Sequence Modifications Mass Mass Fractional Part Protein Groups Proteins Gene Names Protein Names Unique (Groups) Unique (Proteins) Acetyl (Protein N-term) Oxidation (M) Missed cleavages Fraction Average Fraction Std. Dev. Fraction 1 Fraction 2 Fraction 3 Fraction 4 Fraction 5 Fraction 6 Fraction 7 Fraction 8 Retention time Calibrated retention time Charges PEP MS/MS scan number Raw file Score Delta score Reverse Potential contaminant Reporter intensity corrected 1 Reporter intensity corrected 2 Reporter intensity corrected 3 Reporter intensity corrected 4 Reporter intensity corrected 5 Reporter intensity corrected 6 Reporter intensity corrected 7 Reporter intensity corrected 8 Reporter intensity corrected 9 Reporter intensity corrected 10 Reporter intensity corrected 11 Reporter intensity corrected 12 Reporter intensity corrected 13 Reporter intensity corrected 14 Reporter intensity corrected 15 Reporter intensity corrected 16 Reporter intensity corrected 17 Reporter intensity corrected 18 Reporter intensity 1 Reporter intensity 2 Reporter intensity 3 Reporter intensity 4 Reporter intensity 5 Reporter intensity 6 Reporter intensity 7 Reporter intensity 8 Reporter intensity 9 Reporter intensity 10 Reporter intensity 11 Reporter intensity 12 Reporter intensity 13 Reporter intensity 14 Reporter intensity 15 Reporter intensity 16 Reporter intensity 17 Reporter intensity 18 Reporter intensity count 1 Reporter intensity count 2 Reporter intensity count 3 Reporter intensity count 4 Reporter intensity count 5 Reporter intensity count 6 Reporter intensity count 7 Reporter intensity count 8 Reporter intensity count 9 Reporter intensity count 10 Reporter intensity count 11 Reporter intensity count 12 Reporter intensity count 13 Reporter intensity count 14 Reporter intensity count 15 Reporter intensity count 16 Reporter intensity count 17 Reporter intensity count 18 Intensity id Protein group IDs Peptide ID Evidence IDs MS/MS IDs Best MS/MS Oxidation (M) site IDs MS/MS Count Taxonomy IDs Taxonomy names Mass deficit AAAAAAAAAAGAAGGR Acetyl (Protein N-term) 1239.632 0.63199703 4183 Q86U42-2;Q86U42 PABPN1 Polyadenylate-binding protein 2 yes no 1 0 0 7 0 1 52.077 52.151 2 1.2703E-10 14551 20230619_1887_Aki_TMTPro18x_K_F7 123.42 116.19 74860 64383 76738 84888 80105 85292 80230 85568 108790 71512 66416 77357 70038 64301 72978 79847 83276 95928 69257 59100 77888 84037 82961 86220 81767 87029 107430 73270 70383 77808 71578 67587 74767 80860 79666 90896 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 426880000 0 4183 0 0 0 0 1 9606 Homo sapiens 0.02176630646818012 AAAAAAAGDSDSWDADAFSVEDPVRK Acetyl (Protein N-term) 2634.1834 0.18340327 355 A0A024R5S5;O75822;O75822-3;O75822-2 EIF3S1;EIF3J Eukaryotic translation initiation factor 3 subunit J yes no 1 0 1 1 0 1 61.771 61.771 3 5.6491E-09 19204 20230619_1880_Aki_TMTPro18x_K_F1 61.37 58.757 16195 12534 14169 14617 15311 18955 15823 17588 16195 17351 18779 18492 15390 16253 19286 20897 18196 21458 14954 11496 14584 14650 15846 18802 15946 18047 16584 17579 19004 18655 16020 17071 19494 20951 17443 20363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46934000 1 355 1 1 1 1 1 9606 Homo sapiens -0.06832109330571257 AAAAAAALQAK Unmodified 955.54508 0.5450795 3558 Q59GY2;P36578;B4DMJ6;H3BM89;H3BU31 RPL4 60S ribosomal protein L4 yes no 0 0 0 2 0.816 1 1 1 48.145 48.196 3 0.00060524 13661 20230619_1880_Aki_TMTPro18x_K_F1 94.692 57.133 649800 508340 549250 620130 609140 686920 656260 654860 698640 755610 695510 659750 706830 608800 614380 797780 787000 794380 599920 466420 567670 617930 629580 688820 660320 673840 709760 755240 713960 672580 716890 639770 636920 797870 751380 754510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2134599999.9999998 2 3558 2 2;3;4 2;3 2 2 9606 Homo sapiens 0.06552876163061683 AAAAAAAPSGGGGGGEEERLEEK Acetyl (Protein N-term) 2125.9876 0.987604 1245 A0A140VKC4;P51608-2;B5MCB4 MECP2 Methyl-CpG-binding protein 2 yes no 1 0 1 1 0 1 43.821 43.821 3 0.0042092 11782 20230619_1880_Aki_TMTPro18x_K_F1 43.303 33.898 41109 30485 36381 45967 44863 55623 45185 50260 61576 54539 55368 64672 72002 54520 49481 66464 69792 65396 37954 28042 37545 45238 46026 55352 46047 51816 61562 55215 57862 64832 71864 57226 51922 66490 66549 62141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69249000 3 1245 3 5 4 4 1 9606 Homo sapiens -0.030350299938618264 AAAAAAGAASGLPGPVAQGLK Acetyl (Protein N-term) 1789.9686 0.96864688 4386 Q96P70 IPO9 Importin-9 yes yes 1 0 0 1 0 1 61.973 61.973 3 2.2365E-22 19257 20230619_1880_Aki_TMTPro18x_K_F1 84.829 59.976 50028 46342 49625 51006 39790 57677 50370 46017 53090 62158 56327 68017 64162 58975 63712 71518 63538 75008 46295 42453 50321 51224 42498 57535 50272 48271 54119 62128 58079 68433 65243 61778 64833 71841 60873 71164 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254520000 4 4386 4 6 5 5 1 9606 Homo sapiens 0.10526129963636777 AAAAAATAAAAASIR Acetyl (Protein N-term) 1298.6943 0.69426293 1657 Q8WVM8;A0A7I2V4B8;A0A7I2V5Z4;A0A7I2V3B4;A0A7I2V5I2;Q53GW1;A0A7I2V590;A0A7I2V4U2;A0A7I2V3G4;G3V2M8;A0A7I2V362;A0A7I2V3C9;A0A7I2YQR2;A0A7I2V534;H0YJY1;A0A7I2V5R9;J3KNG4;A0A7I2V4B9;G3V5F3;A0A7I2V3Y3;A0A7I2V414;G3V4I1;G3V3K9 SCFD1 Sec1 family domain-containing protein 1 yes no 1 0 0 8 0 1 60.296 60.333 2 8.9735E-33 17904 20230619_1888_Aki_TMTPro18x_K_F8 128.14 108.5 28378 24444 32539 34486 31201 36545 36632 39025 40628 40765 36798 36408 38753 38185 41540 40263 37624 47296 26281 22455 32706 34024 32665 36839 36754 39731 41028 40973 38033 37217 39654 39437 41972 40826 36104 44812 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76096000 5 1657 5 7 6 6 1 9606 Homo sapiens 0.056863569951474346 AAAAAATAPPSPGPAQPGPR Unmodified 1754.9064 0.90638097 4133 Q6SPF0 SAMD1 Atherin yes yes 0 0 0 8 0 1 39.575 39.565 3 4.4396E-16 9303 20230619_1888_Aki_TMTPro18x_K_F8 152.94 130.95 19230 12317 17344 15582 21869 21176 20198 19433 26200 18339 24026 21154 20838 21751 21680 22111 23950 19805 17743 11315 17829 15546 22304 20954 20643 19942 26230 18701 24595 21388 21440 22411 22157 22090 22864 18851 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51454000 6 4133 6 8 7 7 1 9606 Homo sapiens 0.0591240361529799 AAAAALSQQQSLQER Unmodified 1570.8063 0.80633258 2583 B4DSX7;Q8WUQ7;Q8WUQ7-2 CACTIN Cactin yes no 0 0 0 6 0 1 42.886 42.98 3 0.0005407 10745 20230619_1886_Aki_TMTPro18x_K_F6 84.859 64.478 63336 44673 72772 81470 94607 95770 91064 97734 101930 91678 98417 98504 102200 84517 88603 95186 109980 109150 58586 41208 73518 79375 96351 95756 92367 99516 103080 93186 101300 99222 103550 88241 91549 96246 105020 103530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14926000 7 2583 7 9 8 8 1 9606 Homo sapiens 0.043761662815313684 AAAAAMAEQESAR Acetyl (Protein N-term) 1317.5983 0.59831364 4155 Q7L5D6 GET4 Golgi to ER traffic protein 4 homolog yes yes 1 0 0 1 0 1 46.937 46.937 2 1.725E-16 13113 20230619_1880_Aki_TMTPro18x_K_F1 154.84 143.35 34456 28498 39490 34600 29802 36885 37028 41670 46652 41118 52036 44282 40474 47393 44914 54808 56050 52560 31902 26141 39525 34496 31948 37225 37249 42208 47142 41695 52580 44981 41988 49112 46264 54806 53496 49959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68055000 8 4155 8 10 9 9 1 9606 Homo sapiens -0.047781589072201314 AAAAAWEEPSSGNGTAR Unmodified 1644.7492 0.74921163 617 Q9P258;A0A024RAC5 RCC2 Protein RCC2 yes no 0 0 0 3 0 1 42.025 42.088 3 3.588E-06 10533 20230619_1882_Aki_TMTPro18x_K_F3 101.01 93.778 28574 22855 36098 34433 42488 43025 41011 41664 48807 37215 47580 50502 46435 37938 38414 41978 52402 52220 26476 21018 36128 33928 43543 42816 41681 42537 49185 38266 48833 50236 47050 39775 39993 42682 50001 49491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41413000 9 617 9 11 10 10 1 9606 Homo sapiens -0.04737300994884208 AAAADGERPGPGPLLVGCGR Unmodified 1919.9636 0.96357827 1885 A0A994J7P9 yes yes 0 0 1 7 0 1 43.599 43.678 3 7.2255E-16 10795 20230619_1887_Aki_TMTPro18x_K_F7 149.52 132.78 29260 25933 31027 34110 36270 37025 32858 36656 38659 29571 34841 36586 34625 33119 34177 35787 68825 41097 27084 23802 31463 33809 37146 37212 33522 37281 38877 30492 35934 36716 35402 34405 36666 36214 65324 39080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45831000 10 1885 10 12 11 11 1 9606 Homo sapiens 0.040395028293687574 AAAAECDVVMAATEPELLDDQEAK Acetyl (Protein N-term) 2588.1622 0.16219882 1609 Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;A0A6I8PIK4;K7ESP1;K7ELJ8;K7ENB7 DNAJC7 DnaJ homolog subfamily C member 7 yes no 1 0 0 1.5 0.5 1 1 65.163 65.167 3 0.00095332 20615 20230619_1880_Aki_TMTPro18x_K_F1 42.612 37.808 2885.7 1786.7 1736.3 2953 1543.5 2913.5 2262.8 2589.4 3398.2 2886.1 3174.9 4075.1 3912.5 3966.7 2297.2 5269.3 4027 4652.5 2655.5 1646.8 1865.4 2881.8 1652.7 2936.7 2274.9 2676.5 3386.8 2939.2 3303.7 4080.9 3899.5 4159 2476.7 5230.5 3840.6 4423.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55366000 11 1609 11 13;14 12 12 1 9606 Homo sapiens -0.06835578745904058 AAAAEGVLATR Acetyl (Protein N-term) 1070.572 0.57202253 2948 F1T0F0;Q6QNY1 BLOC1S2 Biogenesis of lysosome-related organelles complex 1 subunit 2 yes no 1 0 0 2 0 1 51.076 51.121 2 3.0724E-07 14938 20230619_1881_Aki_TMTPro18x_K_F2 90.108 57.268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 2948 13 15 13 13 1 9606 Homo sapiens 0.039559399836207376 AAAAELSLLEK Acetyl (Protein N-term) 1156.634 0.63395409 3253 O43324;D6RBD7;C9J1V9;O43324-2 EEF1E1;EEF1E1-BLOC1S5 Eukaryotic translation elongation factor 1 epsilon-1 yes no 1 0 0 3 0.816 1 1 1 64.296 64.312 2 4.8907E-09 20136 20230619_1883_Aki_TMTPro18x_K_F4 96.331 70.505 244150 209260 223780 239550 180830 217380 220380 235470 240650 284140 272260 286460 311400 250380 285830 315640 294220 333040 225670 191820 228460 239230 192490 221940 220710 240620 245530 284490 279680 289450 315240 263030 291740 317020 281700 316000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 503230000 13 3253 14 16;17;18 14;15;16 16 3 9606 Homo sapiens 0.06190246612095507 AAAAGAAAAAAAEGEAPAEMGALLLEK Acetyl (Protein N-term) 2437.2159 0.21588937 726 A0A0G2JIS2;A0A1U9X7P8;A0A024RCN9;Q96KQ7-2;Q96KQ7;Q96KQ7-3 EHMT2 Histone-lysine N-methyltransferase EHMT2 no no 1 0 0 5 0 1 67.004 67.046 3 1 NaN NaN 8222 7304.9 6968.4 7079.1 8922.2 8005.1 9590.3 8680.3 10074 9067.8 9060.5 14383 11762 9605 11249 10335 9458.4 11483 7597.1 6685.7 7212.1 7186.9 9117.9 8049.7 9641.1 8835.8 10197 9302.1 9501.7 14176 11888 10102 11345 10443 9081.1 10887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10876000 14 726 15 19 0 9606 Homo sapiens 0.05477006538785645 AAAAKPNNLSLVVHGPGDLR Acetyl (Protein N-term) 2041.1069 0.10687169 3775 V9HW89;Q00796;A0A6I8PIS1;H0YKB3;Q00796-2;A0A6I8PRA7 HEL-S-95n;SORD Sorbitol dehydrogenase yes no 1 0 1 1 0 1 51.529 51.529 3 5.4265E-45 14962 20230619_1880_Aki_TMTPro18x_K_F1 137.69 122.3 34886 32629 36774 38569 44957 47562 46277 38340 29000 40766 45934 31668 27688 25351 48026 23453 23589 20726 32301 29910 37336 38577 46011 47212 46052 39887 31228 40766 45483 32361 29773 26255 46995 23536 22786 19725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88878000 15 3775 16 20 17 17 1 9606 Homo sapiens 0.12796253212081865 AAAASAAEAGIATTGTEDSDDALLK Unmodified 2319.1078 0.10777871 3655 P55036;H0Y3Y9 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes no 0 0 0 2.5 0.5 1 1 57.577 57.601 3 1.7174E-53 17644 20230619_1881_Aki_TMTPro18x_K_F2 243.18 229.17 51994 45944 53037 58102 51905 68417 61597 58333 69831 70265 68538 66648 71447 57843 69023 81679 71678 85642 48110 42151 53822 57798 54353 68139 61797 60614 70641 70272 70504 67554 72695 61247 70453 81870 68652 81250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253500000 16 3655 17 21;22 18;19 18 2 9606 Homo sapiens 0.0009891348918245058 AAAAVSESWPELELAER Acetyl (Protein N-term) 1869.9109 0.91085723 4224 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 1 0 0 1.5 0.5 1 1 64.677 64.681 2 3.6522E-24 20688 20230619_1881_Aki_TMTPro18x_K_F2 149.41 132.78 7057 5983.6 5957.9 5892.9 6043.7 7783.9 7677.2 7127.8 8280.9 10534 13618 13829 14266 10746 12112 15815 12892 18150 6518.4 5478 6147 5987.8 6325.8 7713.5 7666.9 7418.6 8617.4 10558 13748 13793 14424 11462 12420 15927 12364 17195 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46830000 17 4224 18 23;24 20;21 21 2 9606 Homo sapiens 0.010698232476215708 AAAAVVEFQR Acetyl (Protein N-term) 1102.5771 0.57710791 3207 O00231;O00231-2;B4DTS5;J3QRY4 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 1 0 0 2 0 1 54.583 54.607 2 7.6864E-06 16430 20230619_1881_Aki_TMTPro18x_K_F2 112.41 83.101 130870 114220 116840 130610 123460 134270 134170 134050 153190 154010 155010 142060 170640 129880 146760 177040 171160 170340 120960 104690 120040 130630 128030 135530 135270 137490 155110 154210 159540 144450 172440 136950 151170 176670 163530 161860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67342000 18 3207 19 25 22;23 23 2 9606 Homo sapiens 0.029922438462335776 AAAAVVVPAEWIK Acetyl (Protein N-term) 1365.7656 0.76563696 4259 Q8NI27;F2Z2V2 THOC2 THO complex subunit 2 yes no 1 0 0 6.5 0.5 1 1 65.36 65.395 2 1.034E-05 20506 20230619_1886_Aki_TMTPro18x_K_F6 90.108 61.365 72672 58250 70495 68570 57988 70320 71844 67027 80565 76066 75817 74644 88707 78696 81359 91172 81383 86481 67173 53422 71598 68448 61654 70898 71919 68968 81397 76378 78579 76012 89797 81687 82918 91136 77902 82171 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115830000 19 4259 20 26;27 24;25 24 2 9606 Homo sapiens 0.09738476699840248 AAADFATHGK Unmodified 987.47739 0.47739386 1293 A0A1S5UZH2;Q8TDZ2;Q8TDZ2-4 MICAL1 Protein-methionine sulfoxide oxidase MICAL1 yes no 0 0 0 6.5 0.5 1 1 38.46 38.533 3 4.0708E-05 8926 20230619_1886_Aki_TMTPro18x_K_F6 147.74 119.73 100590 69361 103740 106820 153310 148860 130720 117940 153430 114810 131870 127160 122910 107270 138320 93270 145640 128580 92946 63840 105860 105270 154570 146630 133750 122560 154060 116680 135930 127810 126490 110610 140520 96089 139160 121810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97949000 20 1293 21 28;29 26;27 26 2 9606 Homo sapiens -0.016845737677158468 AAADLMAYCEAHAK Oxidation (M) 1536.6701 0.67009837 3007 G3V3J9;G3V2N0;P59768 GNG2 Guanine nucleotide-binding protein subunit gamma;Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 yes no 0 1 0 5 0 1 45.025 45.103 3 3.8338E-05 11592 20230619_1885_Aki_TMTPro18x_K_F5 99.844 80.909 52268 39999 43496 50817 48309 46650 49137 53267 57508 61895 73716 74242 78666 68930 70113 91522 81964 95413 48244 36719 45019 50378 49800 47661 49783 54193 58772 62452 75086 74690 79742 72463 72225 91752 78401 90533 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109720000 21 3007 22 30 28 28 1773 1 9606 Homo sapiens -0.07676987545028169 AAADLMAYCEAHAK Unmodified 1520.6752 0.67518375 3007 G3V3J9;G3V2N0;P59768 GNG2 Guanine nucleotide-binding protein subunit gamma;Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 yes no 0 0 0 5.5 0.5 1 1 50.183 50.26 3 8.6567E-12 14023 20230619_1886_Aki_TMTPro18x_K_F6 179.39 173.49 500590 353820 439830 449130 311270 422440 420260 441000 514690 663810 689870 797530 844830 725020 662080 960330 968720 1125700 462030 324910 450020 445480 337340 429470 420740 455260 526630 662750 706900 801160 848980 762910 695070 969420 924990 1066900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 405140000 22 3007 22 31;32 29 29 1 9606 Homo sapiens -0.064326836823966 AAAEAANCIMEVSCGQAESSEKPNAEDMTSK Acetyl (Protein N-term) 3327.4 0.39995604 1536 A0A3S6H812;Q99873-3;A0A3S6H7G3;A0A3Q8ATF5;A0A3Q8APX7;A0A3S6H7Y4;A0A3Q8B027;A0A3S6H765;A0A3Q8BCJ2;A0A3S6H950;Q99873-5;A0A3Q8AIS5;A0A3Q8B4N0;A0A3S6H8W3;A0A3S6H8B5;A0A3S6H7X9;A0A3Q8AIS8;A0A3S6H767;A0A3Q8AX95 PRMT1 Protein arginine N-methyltransferase 1 yes no 1 0 1 3.5 0.5 1 1 61.638 61.654 4 7.2543E-22 19096 20230619_1882_Aki_TMTPro18x_K_F3 108.75 106.05 36957 28865 33916 38371 26387 39254 34194 39788 39346 44291 35596 33784 47480 38140 37488 45070 38691 47306 34141 26509 34630 37975 28307 39606 34209 40710 39693 44196 37202 34930 47590 39595 38407 45280 37067 44876 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141940000 23 1536 23 33;34 30 30 1 9606 Homo sapiens -0.17064793727922734 AAAEDVNVTFEDQQK Unmodified 1663.7689 0.76894402 4575 Q9NQP4;E9PQY2;B2R548 PFDN4 Prefoldin subunit 4 yes no 0 0 0 2.4 1.02 1 2 1 1 50.008 50.05 2;3 6.4373E-08 14166 20230619_1882_Aki_TMTPro18x_K_F3 135.81 123.19 109810 76851 77570 112020 65181 90915 88686 80884 92066 113000 95665 122830 129170 113220 110400 141630 142660 136800 101200 70682 81520 109860 69543 93239 88164 84282 93895 112760 99647 123850 129940 118580 114540 141500 136140 130000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 647520000 24 4575 24 35;36;37;38;39 31;32 32 2 9606 Homo sapiens -0.03638969774783618 AAAEEEDGGPEGPNR Acetyl (Protein N-term) 1539.6437 0.6437435 728 A0A140TA09;A0A024RCQ4;B4DJS6;Q99942 RNF5 E3 ubiquitin-protein ligase RNF5 yes no 1 0 0 1 0 1 35.076 35.076 2 1.9495E-18 8040 20230619_1880_Aki_TMTPro18x_K_F1 159.09 158.46 11359 9969.6 14870 12457 19426 17673 19047 15685 23042 19598 21619 19118 21854 19523 16615 15887 22818 22583 10535 9145.7 14866 12449 19771 17440 19338 16268 23182 19598 22234 19439 22059 19943 17325 16403 21771 21380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15460000 25 728 25 40 33 33 1 9606 Homo sapiens -0.10449261911116992 AAAEEEDGGPEGPNRER Acetyl (Protein N-term) 1824.7874 0.78744763 728 A0A140TA09;A0A024RCQ4;B4DJS6;Q99942 RNF5 E3 ubiquitin-protein ligase RNF5 yes no 1 0 1 1 0 1 30.953 30.953 2 9.4741E-18 6349 20230619_1880_Aki_TMTPro18x_K_F1 130.56 110.8 0 0 0 0 0 0 0 0 0 817.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 817.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 18196000 26 728 26 41 34 34 1 9606 Homo sapiens -0.09195459870852574 AAAEEGHIIPR Unmodified 1162.6095 0.60947067 1400 A0A384MDM5;O95551;O95551-2;X6R5A3;O95551-3 TDP2 Tyrosyl-DNA phosphodiesterase 2 yes no 0 0 0 3 0 1 35.976 36.034 3 1.3048E-12 7974 20230619_1882_Aki_TMTPro18x_K_F3 175.15 110.44 73849 57046 68234 59187 73490 77563 73327 71072 78118 75791 84338 92635 91459 77410 74445 96344 95115 98334 68220 52267 69798 59890 75898 76924 74112 73178 79571 76858 86594 92766 92323 81344 77263 96558 90827 93366 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122200000 27 1400 27 42 35 35 1 9606 Homo sapiens 0.03467031249238062 AAAEQAISVR Unmodified 1014.5458 0.54580778 3784 Q01780-2;Q01780 EXOSC10 Exosome component 10 yes no 0 0 0 5 0 1 39.368 39.459 2 0.00010195 9293 20230619_1885_Aki_TMTPro18x_K_F5 142.92 79.385 87153 62835 79004 80588 88830 95855 86042 74601 119780 98676 107480 99820 97835 90299 83848 112480 128800 109900 80465 57702 81081 80109 91482 95294 87927 78362 119550 98561 110340 101000 99603 94598 88140 112440 122670 104480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 213440000 28 3784 28 43 36 36 1 9606 Homo sapiens 0.03911670812135526 AAAEQLR Unmodified 757.40825 0.40825167 4425;3330 O94766;Q5U676;B4DNL8;O94766-2;G3V150;E9PNA1;Q9BS14 B3GAT3;GANAB Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 no no 0 0 0 3 0 1 32.207 32.285 2 0.075259 6480 20230619_1882_Aki_TMTPro18x_K_F3 70.912 17.337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 3330;4425 29 44 37 37 1 9606 Homo sapiens 0.019843870033810163 AAAEVAGQFVIK Unmodified 1202.6659 0.66592292 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 7.5 0.5 1 1 57.193 57.246 3 9.8494E-10 16667 20230619_1888_Aki_TMTPro18x_K_F8 145.91 92.158 209810 157500 187310 198360 150630 179040 154740 143730 179950 178900 152390 118990 159150 135490 138660 167910 147870 133410 193730 144580 191620 196690 159680 181710 156660 150320 180910 177180 157700 124170 161250 140940 142030 166210 141290 127130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 125600000 30 1817 30 45;46 38;39 39 2 9606 Homo sapiens 0.07269659085886815 AAAFEEQENETVVVK Unmodified 1662.8101 0.81008055 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 2 0 1 52.095 52.134 3 0.047491 15449 20230619_1881_Aki_TMTPro18x_K_F2 44.457 9.772 44145 18717 28374 37258 23108 30453 30924 28432 41722 34006 39018 33861 52425 39042 22495 37763 39943 49546 40576 17338 30111 35969 24731 31224 31056 29365 41759 34100 40663 34581 51629 40087 24449 38580 38115 46899 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234550000 31 1292 31 47 40 40 1 9606 Homo sapiens 0.005187912646533732 AAAFEQLQK Unmodified 1004.5291 0.52909508 2627 B4DZ87;O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 0 7 0 1 50.059 50.14 3 0.00096104 13619 20230619_1887_Aki_TMTPro18x_K_F7 97.431 25.929 117660 92989 99369 119180 132850 132050 140640 132880 159580 121470 147370 152300 145660 121170 143720 150940 155990 143280 108630 85360 103090 118350 135480 132600 141870 135430 160860 124370 151760 152200 148620 127560 146890 150770 149040 136210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 296830000 32 2627 32 48 41 41 1 9606 Homo sapiens 0.02701169926183411 AAAGAAATHLEVAR Unmodified 1307.6946 0.69459728 1874 Q96S52;A0A994J5E6;Q8NBL9;B2RBB2;A0A994J801;A0A994J555;A0A994J5S5;A0A994J550;A0A994J7M9;A0A994J810;A0A994J7M6;A0A994J5F0;A0A994J5S7;A0A994J804;A0A994J808;A0A994J5F5;K7EN97 PIGS GPI transamidase component PIG-S yes no 0 0 0 6 0 1 37.312 37.381 3 7.6957E-58 8486 20230619_1886_Aki_TMTPro18x_K_F6 275.44 248.77 66498 48729 63237 63503 67555 77125 73009 67060 84407 82802 94020 80554 86845 65345 72897 82229 85927 66050 61424 44752 64582 63089 70013 76714 73649 69632 85709 82781 95583 81402 88141 68813 75136 81443 81951 62979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110600000 33 1874 33 49 42 42 1 9606 Homo sapiens 0.053057767150448853 AAAGELQEDSGLCVLAR Unmodified 1758.857 0.85704752 27 Q96C19;A0A024QZ77;H0Y4Y4 EFHD2 EF-hand domain-containing protein D2 yes no 0 0 0 3 0 1 54.53 54.577 3 5.1911E-07 16184 20230619_1882_Aki_TMTPro18x_K_F3 90.453 85.124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 27 34 50 43 43 1 9606 Homo sapiens 0.007973275442054728 AAAGQESEGPAVGPPQPLGK Unmodified 1859.9377 0.93774068 1061 A0A0S2Q0B1;O14497;O14497-2 ARID1A AT-rich interactive domain-containing protein 1A yes no 0 0 0 5 0 1 48.416 48.492 3 2.9707E-16 13086 20230619_1885_Aki_TMTPro18x_K_F5 119.8 107.78 60956 51543 56214 59088 61820 73457 68764 69559 80261 86064 99705 102880 96496 85507 84338 95440 112680 102980 56340 47250 57612 59254 64019 73098 69300 71760 81895 86593 101250 103080 98050 89283 87593 96146 107470 97769 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53412000 35 1061 35 51 44;45 44 2 9606 Homo sapiens 0.04216931858741191 AAAGSAAGGFQR Unmodified 1062.5207 0.52065566 1792 Q8NFD5-1;A0A8Q3S458;Q8NFD5-3;Q8NFD5-2;Q8NFD5;A0A1B0GTJ8;A0A6Q8NVI4;A0A3F2YNW7;A0A6I8PTU7 ARID1B AT-rich interactive domain-containing protein 1B yes no 0 0 0 8 0 1 34.558 34.55 2 1.9055E-09 7307 20230619_1888_Aki_TMTPro18x_K_F8 183.43 153.25 23171 15806 21329 24849 27642 28573 25964 25421 32594 26686 36204 33971 29380 31560 32499 17154 38188 36210 21390 14552 21934 24382 28166 28532 26480 26229 32937 27142 36666 34050 30396 31871 33217 18592 36469 34198 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17061000 36 1792 36 52 46 46 1 9606 Homo sapiens -0.008103839904379129 AAAHHYGAQCDKPNK Unmodified 1666.7634 0.7634219 3629 P51970;B7Z768 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes no 0 0 1 8 0 1 30.766 30.777 5 1.0944E-07 5889 20230619_1888_Aki_TMTPro18x_K_F8 137.84 121.44 25888 13704 26537 32653 54034 53269 39289 39483 42358 24520 35527 29151 36287 25922 31265 11302 28968 22500 23890 12716 27348 31626 53501 51956 40544 40878 42657 25767 36760 29273 36727 26112 31637 12295 27694 21276 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166370000 37 3629 37 53 47 47 1 9606 Homo sapiens -0.04328927047572506 AAALAAAVAQDPAASGAPSS Unmodified 1695.8428 0.84277766 4262 Q8TAE8;Q7LAX7 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes no 0 0 0 5.5 0.5 1 1 60.044 60.101 3 0.0040958 18181 20230619_1886_Aki_TMTPro18x_K_F6 66.335 63.973 54060 51653 52837 58212 57537 69794 67713 60045 80433 63989 77929 68234 75309 64285 71745 95447 79866 101810 50031 47324 53896 58403 59728 69470 68047 62145 81038 64641 79893 69061 76788 68103 73610 95678 76489 96553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 275810000 38 4262 38 54;55 48 48 1 9606 Homo sapiens 0.02268998387580723 AAALEAMK Unmodified 803.42112 0.42112454 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;H0YGI8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 6.5 0.5 1 1 49.232 49.313 3 0.003884 13257 20230619_1887_Aki_TMTPro18x_K_F7 98.299 63.492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 2088 39 56;57 49;50 50 2 9606 Homo sapiens 0.01155082071261404 AAALEFLNR Unmodified 1003.5451 0.5450795 2088 V9HW72;A8K690;P31948;P31948-2;F5H783;F5GXD8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 1 0 1 55.744 55.744 2 5.1365E-06 16698 20230619_1880_Aki_TMTPro18x_K_F1 183.74 140.71 365360 272620 305710 365320 254360 366470 332750 323810 405720 377150 345260 374360 386070 328310 370980 383590 359920 398860 337200 250430 315200 361170 271310 369250 333220 335310 406800 378330 359110 378440 392010 343150 376970 385430 344750 378540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2116299999.9999998 40 2088 40 58 51 51 1 9606 Homo sapiens 0.04344876163088429 AAALVLQTIWGYK Unmodified 1432.8078 0.80783613 1594 O60716;H0YC95;O60716-3;O60716-2;Q68DU0;C9JZR2;A0A669KB05;O60716-5;O60716-11;O60716-10;O60716-9;O60716-17;Q96FS1;O60716-21;O60716-19;O60716-13;O60716-18;O60716-6;O60716-8;O60716-4;O60716-7;A0A669KB62;O60716-20;O60716-22;O60716-23;O60716-16;O60716-24;O60716-12;O60716-15;O60716-14;Q7KZJ3;O60716-26;A0A024R4Z0;O60716-25;O60716-27;O60716-29;O60716-31;A0A804HIL4;A0A804HK15;A0A024R4Y7;O60716-32;O60716-28;O60716-30 CTNND1;DKFZp781O2021 Catenin delta-1 yes no 0 0 0 7.5 0.5 1 1 65.829 65.85 3 0.024261 20294 20230619_1888_Aki_TMTPro18x_K_F8 55.314 36.071 13974 14177 15316 16186 12386 15397 14728 14748 18358 14466 16968 15756 16828 13502 16263 18400 13808 16876 12951 12988 15410 16175 13175 15615 14833 15110 18423 14682 17461 15875 17143 14261 16426 18320 13257 16033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47021000 41 1594 41 59;60 52 52 1 9606 Homo sapiens 0.10874452108214427 AAAMDVDTPSGTNSGAGK Acetyl (Protein N-term) 1690.7468 0.74682837 3729 P62877 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 1 0 0 2 0 1 48.626 48.691 2 2.5187E-23 13811 20230619_1881_Aki_TMTPro18x_K_F2 176.42 154.43 21549 20073 17912 21458 26272 27614 26487 25670 26548 31133 29054 27108 33485 27559 24568 34096 32861 32219 19915 18383 18647 21640 26625 27423 26687 26496 27179 31045 29864 27729 33610 28766 25649 34025 31357 30624 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47656000 42 3729 42 61 53 53 1 9606 Homo sapiens -0.07091517514822954 AAAMDVDTPSGTNSGAGKK Acetyl (Protein N-term);Oxidation (M) 1834.8367 0.83670601 3729 P62877 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 1 1 1 4 0 1 40.122 40.164 3 2.1248E-05 9611 20230619_1883_Aki_TMTPro18x_K_F4 57.499 49.395 19172 12883 17044 15705 19150 18219 16093 19385 20226 18650 25194 19137 21439 17031 16768 18937 20312 18006 17692 11828 17506 15670 19633 18267 16551 19691 20556 18901 25398 19359 21767 17742 17340 18944 19384 17121 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25747000 43 3729 43 62 54 54 2408 1 9606 Homo sapiens -0.04731887906268639 AAANEQLTR Unmodified 972.49886 0.49885759 2760 C9JRZ6;A4D1N4;Q9NX63;F8WAR4;A0A286YEX5;B7Z1X9 CHCHD3 MICOS complex subunit MIC19 yes no 0 0 0 3.5 0.5 1 1 32.16 32.23 2 0.00033637 6464 20230619_1882_Aki_TMTPro18x_K_F3 156.35 116.08 80051 39861 109120 114010 182860 203600 129850 162780 143740 86069 145160 177400 125280 130660 144270 53969 170670 151850 74063 37144 109570 110020 182630 197940 134510 166950 145480 93946 148270 174150 129580 132230 147300 61271 162920 143260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113090000 44 2760 44 63;64 55;56 55 2 9606 Homo sapiens 0.011508112609817545 AAAPAPEEEMDECEQALAAEPK Oxidation (M) 2372.0148 0.014806305 3510 Q53YD7;P26641;P26641-2;Q2F840 EEF1G Elongation factor 1-gamma yes no 0 1 0 1 0 1 49.206 49.206 3 3.4589E-12 13992 20230619_1880_Aki_TMTPro18x_K_F1 124.35 117.89 52883 43647 39295 49074 39243 51570 44077 46677 48987 51730 54537 56412 63058 54038 45320 74350 54396 61615 48799 40008 41112 49143 41002 51839 44332 48162 49872 52154 56059 57020 63250 56867 47064 73588 52008 58631 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167410000 45 3510 45 65 57 57 2174 1 9606 Homo sapiens -0.11632050560001517 AAAPAPEEEMDECEQALAAEPK Unmodified 2356.0199 0.019891683 3510 Q53YD7;P26641;P26641-2;Q2F840 EEF1G Elongation factor 1-gamma yes no 0 0 0 1.5 0.5 1 1 55.499 55.509 3 9.0983E-09 16779 20230619_1881_Aki_TMTPro18x_K_F2 116.21 109.76 175910 134840 149030 153290 108400 161810 137520 158530 188270 188590 166400 193570 220850 194860 156310 270230 235070 236070 162390 123650 153060 153460 117090 162830 138640 162930 188170 189180 174240 196400 220770 204860 165060 268070 224160 224580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2238100000 46 3510 45 66;67 58;59 59 2 9606 Homo sapiens -0.10387746697415423 AAAPGVEDEPLLR Unmodified 1336.6987 0.69867961 2856 D6W4Z6;P31350;P31350-2;A0A7P0SBL1;A0A286YFD6 hCG_23833;RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes no 0 0 0 2 0 1 49.083 49.149 2 9.6709E-21 14043 20230619_1881_Aki_TMTPro18x_K_F2 222.28 181.55 270120 219980 238760 267180 180280 222160 206110 204780 276730 334130 311750 236680 334980 239770 222240 350100 303610 211040 249520 201790 244410 265350 192990 227700 208670 213920 279630 327770 318510 245080 335520 253130 233140 341910 289060 202260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 341040000 47 2856 46 68 60 60 1 9606 Homo sapiens 0.04379821418092433 AAAPPSYCFVAFPPR Acetyl (Protein N-term) 1691.813 0.81299786 897 A0A090N7T9;Q12765;C9K052;B8ZZP4;C9J7U9;B4DE46 SCRN1 Secernin-1 yes no 1 0 0 1.67 0.471 1 2 63.381 63.387 2 5.6613E-08 20084 20230619_1881_Aki_TMTPro18x_K_F2 116.77 108.23 74468 60510 69274 81322 69225 75948 75794 75319 85284 86338 89943 80645 102100 82191 84123 98322 87824 90588 68816 55568 70871 80322 72100 77189 76354 77306 86559 86504 92519 82240 102920 85605 86142 98078 84013 86112 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 179310000 48 897 47 69;70;71 61;62;63 62 3 9606 Homo sapiens -0.005236120914787534 AAAPQAWAGPMEEPPQAQAPPR Oxidation (M) 2286.0851 0.085149973 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;B3KSQ7;B7Z2Z0;D6R9Q9 DBN1 Drebrin yes no 0 1 0 4.5 0.5 1 1 47.495 47.555 3 2.4838E-12 12837 20230619_1883_Aki_TMTPro18x_K_F4 130.36 121.97 47511 41671 49731 56098 49747 51088 53984 53413 58217 64375 60380 61648 68906 56288 59387 70789 71128 68172 43969 38258 50367 55392 51744 52102 54331 54713 59210 64374 62230 62527 69597 59019 61265 70724 67921 64789 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 276410000 49 1396 48 72;73 64;65;66 64 869 3 9606 Homo sapiens -0.006449195986988343 AAAPQAWAGPMEEPPQAQAPPR Unmodified 2270.0902 0.090235351 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;B3KSQ7;B7Z2Z0;D6R9Q9 DBN1 Drebrin yes no 0 0 0 5.5 0.5 1 1 52.02 52.095 3 3.5744E-23 14883 20230619_1886_Aki_TMTPro18x_K_F6 170.38 167.17 85242 71940 83122 102840 83560 94546 101640 107670 118830 101380 95056 102780 115060 87495 98219 111620 114520 120970 78820 66101 84753 101170 87278 96497 101960 108930 119120 102840 99573 103760 115950 92104 101140 112250 109460 114780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 410370000 50 1396 48 74;75 67;68 68 2 9606 Homo sapiens 0.005993842638872593 AAAPRPPVSAASGRPQDDTDSSR Unmodified 2308.1156 0.11559848 4274 Q8TF74 WIPF2 WAS/WASL-interacting protein family member 2 yes yes 0 0 2 5.5 0.5 1 1 32.804 32.864 4 6.6577E-34 6832 20230619_1886_Aki_TMTPro18x_K_F6 196.81 173.36 8401.9 7019.5 9011.6 12595 11623 16465 10671 10973 11099 9919.3 11246 12028 11697 8216.3 10178 11865 12997 11130 7774.7 6469.1 9169.1 12290 11867 16210 10830 11564 11288 10149 11556 11987 11843 8798.5 10540 11819 12395 10586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26653000 51 4274 49 76;77 69 69 1 9606 Homo sapiens 0.013865303199509071 AAAQLLQSQAQQSGAQQTK Unmodified 1956.0025 0.0024662011 1492 D6RGI3;A0A384P5S0;D6RER5;Q9NVA2;Q9NVA2-2;Q96KC0;H0Y961;H0Y9G8 SEPT11 Septin-11 yes no 0 0 0 1.67 0.471 1 2 48.371 48.418 3;4 2.9092E-39 13709 20230619_1881_Aki_TMTPro18x_K_F2 245.18 227.94 873150 713250 873870 938780 978400 1077200 965180 960890 1183200 1116500 1238200 1370400 1364400 1072300 1105400 1424900 1494600 1312200 807370 654830 889590 931130 1007900 1076100 980840 994010 1195200 1127900 1273900 1369500 1376000 1134500 1151800 1419000 1425000 1248200 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1414100000 52 1492 50 78;79;80 70;71;72;73 73 4 9606 Homo sapiens 0.06270506664736786 AAASGNENIQPPPLAYK Unmodified 1739.8842 0.88424855 1761 A0A8I5KY07;A0A8I5KRP1;A0A8I5KRK1;A0A8I5KYQ0;A0A8I5KZB3;Q9H2M9;A0A8I5QJC9;A0A8I5KWJ9;A0A8I5QJG4;A0A8I5KUS2 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 7.5 0.5 1 1 51.913 51.989 3 0.00017463 14408 20230619_1888_Aki_TMTPro18x_K_F8 86.378 73.397 99455 77773 88806 87684 90503 93457 104420 97823 117820 113230 106970 103560 134410 109620 128730 136250 125600 111170 91856 71306 91114 87863 94226 94211 104880 100050 118880 113350 111470 105840 136010 114280 130860 135090 120110 105910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52497000 53 1761 51 81;82 74;75 75 2 9606 Homo sapiens 0.04390179146912487 AAASGQPRPEMQCPAEHEEDMYR 2 Oxidation (M) 2691.1112 0.11118308 4328 Q96BN8 OTULIN Ubiquitin thioesterase otulin yes yes 0 2 1 2 0 1 32.356 32.416 4 0.0032576 6686 20230619_1881_Aki_TMTPro18x_K_F2 63.706 49.544 1913.6 2219.6 1984.3 2756.4 3825.8 3303.9 2507.1 3825.2 4213.5 4396.4 2934.3 2417.9 3248.8 2738.3 2791.1 3635.1 4448.8 4642.8 1774.6 2034.3 2040.8 2746.2 3788.9 3313.6 2658.2 3880.3 4152 4351.8 3080.1 2555.7 3286.8 2866.1 2942.3 3691.2 4241.9 4398.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13489000 54 4328 52 83 76 76 2733;2734 1 9606 Homo sapiens -0.16672806271708396 AAASLAAVSGTAAASLGSAQPTDLGAHK Unmodified 2493.2823 0.28232946 4175 Q7Z5L9-2;Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes no 0 0 0 2 0 1 57.795 57.81 4 8.6081E-73 17747 20230619_1881_Aki_TMTPro18x_K_F2 268.25 248.95 54620 44986 51804 54665 42633 56032 51903 52789 60436 58593 63710 53487 64675 61755 57471 67672 66931 65896 50486 41266 52746 54433 45346 56464 52085 54312 61205 58775 65180 54871 65687 63718 59146 67786 63941 62611 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44076000 55 4175 53 84 77 77 1 9606 Homo sapiens 0.09541958425052144 AAASVTPPGSLELLQPGFSK Acetyl (Protein N-term) 2011.0626 0.062606842 516 B4DGI3;A0A024R8H5;Q12933-4;Q12933-3;Q12933;Q12933-2;E5KBQ3;B1AMY1;B1AMX7;B1AMX8 TRAF2 TNF receptor-associated factor 2 yes no 1 0 0 8 0 1 64.683 64.703 3 5.433E-13 19816 20230619_1888_Aki_TMTPro18x_K_F8 76.176 56.853 33753 24797 34711 35888 24091 31204 30034 33747 31372 41601 38671 40214 41074 39232 38166 43426 40970 45129 31198 22800 35028 35266 26055 31948 30021 34509 32225 41557 39453 40844 41733 40710 39047 43654 39201 42830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53328000 56 516 54 85 78 78 1 9606 Homo sapiens 0.09751804275288123 AAATAEEPDPK Unmodified 1098.5193 0.51931826 717 Q99733-2;Q99733;B4DS05;B7ZB83;B7ZAK9;A0A024RCC9;A0A2U9QGI0;C9JZI7;A0A994J3W0;B7ZAC7;A0A0J9YXQ2;C9J6D1;E9PKT8;A8MXH2;H0YCI4 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 0 0 0 2 0 1 38.003 38.066 3 0.00034334 8948 20230619_1881_Aki_TMTPro18x_K_F2 98.943 71.844 44858 29134 45205 45507 59453 71542 49691 62639 59914 46630 65873 70784 58926 60816 63052 43339 69912 66536 41428 26828 46112 44927 60428 70110 51028 64128 60634 48738 67045 70392 60629 62105 64306 45209 66802 62963 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103480000 57 717 55 86 79 79 1 9606 Homo sapiens -0.02600062869851172 AAATGAVAASAASGQAEGK Acetyl (Protein N-term) 1629.7958 0.79582747 4613 Q9NWH9;H7BXE3;H0YLW7;H0YMW8;H0YNF3;H0YMR6;H0YLE6;H0YL55 SLTM SAFB-like transcription modulator yes no 1 0 0 3.5 0.5 1 1 48.116 48.176 2 3.6906E-39 13117 20230619_1883_Aki_TMTPro18x_K_F4 165.58 137.38 48224 40734 50419 56094 38549 43682 41116 39275 47968 54392 70840 61861 62047 57541 54601 64311 63789 64913 44617 37412 50880 55206 41063 45013 41571 40880 49381 54387 71144 62358 63274 59830 56216 64529 60952 61644 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139190000 58 4613 56 87;88 80;81 81 2 9606 Homo sapiens 0.0061213883641357825 AAATGPSFWLGNETLK Acetyl (Protein N-term) 1703.8519 0.85188578 1198 J3K000;P12955;A0A8V8TLL9;A0A8V8TLP4;A0A140VJR2;A0A494C165;P12955-2;P12955-3;K7ES25;A0A494C194;A0A8V8TN48;A0A8V8TNF2;A0A8V8TN70 PEPD Xaa-Pro dipeptidase yes no 1 0 0 6.5 0.5 1 1 64.891 64.927 2 3.2367E-11 20056 20230619_1887_Aki_TMTPro18x_K_F7 113.22 85.482 41445 38486 38395 40752 33782 54152 43197 37927 70924 65973 62688 81467 74715 64410 61384 70505 71950 92933 38332 35244 39225 41145 35904 53347 43842 40634 70359 65682 65339 81319 75257 67349 63293 71977 68885 87953 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 189870000 59 1198 57 89;90 82;83;84 83 3 9606 Homo sapiens 0.028113917438759017 AAATPESQEPQAK Unmodified 1326.6416 0.64155866 3602 P49006 MARCKSL1 MARCKS-related protein yes yes 0 0 0 2.5 0.5 1 1 36.676 36.733 3 6.3853E-08 8235 20230619_1882_Aki_TMTPro18x_K_F3 118.87 103.48 87680 49168 101390 112200 148040 187830 124350 147230 147540 101890 144620 163930 135080 138400 148280 89223 152040 150150 81021 45573 102650 108940 149630 183040 127510 151910 148700 107380 148270 162620 138940 140940 150410 94088 145420 141980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 336760000 60 3602 58 91;92 85;86 86 2 9606 Homo sapiens -0.008696458583017375 AAAVAAAGAGEPQSPDELLPK Acetyl (Protein N-term) 2004.0164 0.016384931 4011 Q9NS69;Q549C5;Q53GB0 TOMM22;MST065 Mitochondrial import receptor subunit TOM22 homolog yes no 1 0 0 3 0 2 62.463 62.493 2;3 3.2662E-16 19456 20230619_1882_Aki_TMTPro18x_K_F3 70.622 54.732 11309 8547.9 11278 13647 10453 10349 12788 14070 13493 12688 13095 16329 15624 13984 14444 15076 14211 14969 10452 7868.1 11460 13315 10974 10797 12786 14083 13691 13002 13590 16324 15813 14553 14699 15127 13604 14216 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194360000 61 4011 59 93;94 87 87 1 9606 Homo sapiens 0.05453739373160715 AAAVADEAVAR Acetyl (Protein N-term) 1084.5513 0.55128709 2638 B4E303;B4E074 yes no 1 0 0 1 0 1 45.65 45.65 2 4.1293E-12 12539 20230619_1880_Aki_TMTPro18x_K_F1 138.06 123.65 23264 20560 26535 28805 26830 26040 30312 26621 29674 19963 25352 23210 26752 16888 29449 20073 21345 18661 21547 18884 26699 28370 27891 26558 30336 27004 30056 20641 26276 23214 27336 17819 29397 20076 20482 17749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68863000 62 2638 60 95 88 88 1 9606 Homo sapiens 0.012393496039521779 AAAVAVAAASR Acetyl (Protein N-term) 998.55089 0.55089316 4175 Q7Z5L9-2;Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes no 1 0 0 5.5 0.5 1 1 49.182 49.259 2 0.00054853 13470 20230619_1885_Aki_TMTPro18x_K_F5 70.363 54.12 16868 17998 21139 22826 19580 19408 25929 22366 27633 23251 22592 23608 23470 23207 22882 26762 24705 27301 15660 16503 21108 22613 20597 19960 25817 22686 27841 23471 23467 23939 23924 24127 23402 26856 23637 25915 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39466000 63 4175 61 96;97 89 89 1 9606 Homo sapiens 0.05155974674744357 AAAVLAAESMVVTLAK Unmodified 1543.8644 0.86436473 1950 A4L733;Q13087-2;Q13087;Q4TT66;H0Y4J5 PDIA2 Protein disulfide-isomerase A2 yes no 0 0 0 2.5 0.5 1 1 65.738 65.759 3 0.013354 20894 20230619_1882_Aki_TMTPro18x_K_F3 58.268 41.243 3397.6 2536.7 3764.4 3605.2 4739 5366.3 5199.2 4990.9 5642.2 4523.4 5880.2 5483.3 4644.8 3509.6 6127.4 5223.7 5331.5 4356.4 3142.8 2331.8 3808.5 3575.5 4857.2 5281.8 5227.8 5110.9 5725.4 4626.1 5968.1 5459.6 4846.2 3775.3 6155.6 5176.6 5102.1 4150.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29763000 64 1950 62 98;99 90 90 1 9606 Homo sapiens 0.11418711882561183 AAAVLSGPSAGSAAGVPGGTGGLSAVSSGPR Acetyl (Protein N-term) 2607.3253 0.3252569 2064 A8K548;Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 1 0 0 1 0 1 61.171 61.171 3 2.5812E-06 18966 20230619_1880_Aki_TMTPro18x_K_F1 62.393 53.347 21085 16576 21106 24346 19143 26482 21856 21556 25248 23006 23345 25718 29913 23026 22305 26259 26962 28469 19492 15240 21434 23959 20158 26482 21990 22410 25456 23265 24339 25889 29946 24026 23093 26449 25762 27011 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118520000 65 2064 63 100 91 91 1 9606 Homo sapiens 0.08588728482391161 AAAVSEAEADFYEQNSR Unmodified 1856.8177 0.81768512 1170 A0A286RZ40;Q59FD0;Q14769;A0A140VJE4;P54802 ufHSD2;NAGLU Alpha-N-acetylglucosaminidase;Alpha-N-acetylglucosaminidase 82 kDa form;Alpha-N-acetylglucosaminidase 77 kDa form yes no 0 0 0 2 0 1 54.304 54.328 3 0.0081288 16347 20230619_1881_Aki_TMTPro18x_K_F2 64.385 59.494 51018 41764 45802 50825 36393 49681 53695 51774 59782 51216 49818 49103 52328 46894 51665 59254 58673 56349 47135 38312 46867 50574 39098 50350 53319 52746 60131 51743 51699 49893 53327 49088 52976 59162 56054 53560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12569000 66 1170 64 101 92 92 1 9606 Homo sapiens -0.07645101205685023 AAAVVGINSETIMK Unmodified 1402.749 0.74900062 1651 A0A7I2V2U6;B2R7W0;P13995 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes no 0 0 0 8 0 1 55.715 55.777 3 4.5632E-05 16089 20230619_1888_Aki_TMTPro18x_K_F8 101.72 82.861 129330 90565 122030 126060 109680 121900 120270 127650 169420 140310 144240 157360 158990 132960 152560 168860 176500 174770 119430 83250 124390 124330 115300 123690 122210 130360 168740 141700 149910 158150 161520 139860 156650 169390 168630 165940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113180000 67 1651 65 102 93 93 1 9606 Homo sapiens 0.06373607751584132 AACCLAGAR Unmodified 948.42695 0.42695497 1052 A0A0K0K1K7;O95336;M0R261;M0R0U3 PGLS 6-phosphogluconolactonase yes no 0 0 0 7.5 0.5 1 1 34.775 34.809 2 0.0020973 7409 20230619_1888_Aki_TMTPro18x_K_F8 109.63 81.142 84533 58415 97314 88490 146800 163960 107470 134470 165480 22103 28471 30690 21193 24401 56399 22294 40493 22504 78187 53754 98476 87841 147610 159290 112390 136270 159400 28904 35415 30642 23644 25227 55655 22567 38773 21438 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49401000 68 1052 66 103;104 94;95 95 2 9606 Homo sapiens -0.04932142688721797 AACDLVR Unmodified 803.39597 0.39597242 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DM67 CSE1L Exportin-2 yes no 0 0 0 4.5 0.5 1 1 37.368 37.436 2 0.036173 8515 20230619_1883_Aki_TMTPro18x_K_F4 92.467 51.781 371020 239640 334730 328010 415520 447130 397710 395140 501040 188060 184630 154690 167660 153190 232400 151520 238230 141570 342340 220320 344210 325500 424900 441780 404970 401670 491010 200800 203530 158730 175000 157950 235000 152040 227210 134920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 241270000 69 1462 67 105;106 96;97 96 2 9606 Homo sapiens -0.013589727313160438 AACFCHR Unmodified 920.37453 0.37452547 855 A0A087WYD5;H0YFF7;Q8NEI1;F5GWD3;Q13889-2;Q13889 GTF2H3 General transcription factor IIH subunit 3 yes no 0 0 0 7.5 0.5 1 1 29.368 29.432 3 0.0046949 5502 20230619_1888_Aki_TMTPro18x_K_F8 109.7 97.856 15512 10693 13388 15265 19149 18177 19414 17774 24064 10057 13864 12726 13469 12860 12268 8566 14528 11818 14314 9832.7 13874 15073 19429 18151 19684 17986 23793 10688 14679 12808 13717 13031 12598 8875.3 13860 11200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6534100 70 855 68 107;108 98 98 1 9606 Homo sapiens -0.0888468103167952 AACNLLQR Unmodified 944.48618 0.48618441 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;V9GYV7;A0A7I2V5S1;Q5VSR5 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 1 0 1 41.175 41.175 2 0.058518 10599 20230619_1880_Aki_TMTPro18x_K_F1 76.035 52.478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 71 1831 69 109 99 99 1 9606 Homo sapiens 0.011720765971176661 AACQCVEPIK Unmodified 1174.5475 0.54746404 4347 Q99575;Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 0 5 0 1 42.799 42.882 3 0.00017916 10719 20230619_1885_Aki_TMTPro18x_K_F5 98.249 72.863 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 72 4347 70 110 100 100 1 9606 Homo sapiens -0.03282779485766696 AACQEAQVFGNQLIPPNAQVK Unmodified 2282.1478 0.14775023 1938 A4D1U5;Q53H12;E9PG39;B4DR72;A0A3B3ISZ0;E9PC15;B4E2Z8;A0A3B3IS09;A0A3B3ITX7 FLJ10842;AGK Acylglycerol kinase, mitochondrial yes no 0 0 0 1 0 1 59.227 59.227 4 3.8887E-08 18200 20230619_1880_Aki_TMTPro18x_K_F1 113.54 104.38 23974 18011 20865 24829 21083 25835 28076 21965 27387 27955 24127 29664 31457 31197 22439 39342 36503 46764 22133 16550 21489 24514 22088 25949 27862 22892 27829 27995 25263 30088 31495 32556 23850 39760 34860 44300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47021000 73 1938 71 111 101 101 1 9606 Homo sapiens 0.05796226469510657 AACSAAAMEEDSEASSSR Oxidation (M) 1844.7153 0.71527024 3795 Q9BUI6;Q05086-3;A0A0D9SG77;A0A6Q8PHE5;A0A1B0GVL3;Q9H2G0;Q05086-2;Q05086 UBE3A Ubiquitin-protein ligase E3A yes no 0 1 0 1 0 1 33.991 33.991 3 6.1366E-10 7587 20230619_1880_Aki_TMTPro18x_K_F1 137.73 131.32 5242.9 4301.2 6093 3705.2 5069 6527.1 6060 4276.4 6382.4 4407.7 6428.4 7428.4 6187.8 5957.5 4493.9 4857.8 8431.7 7083.3 4854.6 3934.2 6090.4 3834.9 5377.2 6335.6 6061.4 4532.8 6474.8 4546 6587.4 7349.2 6251.4 6133.3 4817.7 5023.8 8020 6709.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18047000 74 3795 72 112 102 102 2478 1 9606 Homo sapiens -0.1732987833106563 AACSAAAMEEDSEASSSR Unmodified 1828.7204 0.72035562 3795 Q9BUI6;Q05086-3;A0A0D9SG77;A0A6Q8PHE5;A0A1B0GVL3;Q9H2G0;Q05086-2;Q05086 UBE3A Ubiquitin-protein ligase E3A yes no 0 0 0 1 0 1 39.38 39.38 3 3.5664E-24 9810 20230619_1880_Aki_TMTPro18x_K_F1 210.91 201.82 8048.7 9178.8 13122 12454 11246 13955 11265 15883 14016 16291 17243 16945 21440 14581 15009 17175 19126 19439 7499.6 8420.8 12877 12331 11833 14034 11465 16087 14267 16451 17713 17095 21418 15277 15613 17337 18262 18439 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84159000 75 3795 72 113 103 103 1 9606 Homo sapiens -0.16085574468456798 AADALEEQQR Unmodified 1129.5364 0.53636531 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;A8K394;F5H4J1;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 1.5 0.5 1 1 37.059 37.089 2 6.578E-07 8798 20230619_1880_Aki_TMTPro18x_K_F1 214.96 181.84 121060 60959 138250 144820 196870 220090 157840 179490 167550 120080 201770 213110 186680 178460 180800 88727 218170 198420 111800 56580 139930 140140 198770 215700 161810 184530 171270 127450 204830 210810 190850 180500 185470 97087 208240 187370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 224240000 76 349;3906 73 114;115 104 104 1 9606 Homo sapiens -0.023221422640290257 AADAVEDLR Unmodified 958.47197 0.47197413 1156 Q6FIA3;A0A0U1RR22;Q9UNF0-2;Q9UNF0;A0A024R4X1 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes no 0 0 0 1 0 1 43.335 43.335 2 0.00028681 11544 20230619_1880_Aki_TMTPro18x_K_F1 141.2 75.123 120570 97864 111770 111060 133610 137200 127940 130480 158700 147190 165490 162330 168790 137760 144320 170850 191380 171900 111420 89718 114580 111460 136880 136650 130300 134180 160180 148340 169560 163320 171010 144680 149920 171140 182520 163330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155730000 77 1156 74 116 105 105 1 9606 Homo sapiens -0.008922973501967135 AADCEVEQWDSDEPIPAK Unmodified 2058.8841 0.88405013 1451 A0A384N605;U3KQ56;Q9UBQ7 GRHPR Glyoxylate reductase/hydroxypyruvate reductase yes no 0 0 0 1.5 0.5 1 1 55.947 55.956 3 5.9895E-24 16972 20230619_1881_Aki_TMTPro18x_K_F2 205.68 196.39 93521 97465 112120 103970 104020 120120 120390 109130 107000 109480 126320 128110 118790 101270 166820 119530 111400 129080 86766 89228 112190 104740 109050 120010 120060 112300 110520 111170 128510 128310 123680 106310 165480 120510 107250 122440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106350000 78 1451 75 117;118 106;107 107 2 9606 Homo sapiens -0.10303653425899029 AADEEAFEDNSEEYIR Unmodified 1886.7806 0.78063091 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DM67 CSE1L Exportin-2 yes no 0 0 0 1 0 1 51.574 51.574 2 3.0494999999999998E-52 14997 20230619_1880_Aki_TMTPro18x_K_F1 303 291.14 69504 50381 62002 78800 60042 75788 77776 64495 75590 106590 101110 98797 112680 94237 90265 117530 103820 118140 64166 46370 63700 77133 63066 76561 77314 67849 78290 105200 103010 100500 113550 98615 93087 117680 99306 112150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155580000 79 1462 76 119 108 108 1 9606 Homo sapiens -0.1272881754205173 AADEEAFEDNSEEYIRR Unmodified 2042.8817 0.88174194 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DM67 CSE1L Exportin-2 yes no 0 0 1 1 0 1 46.906 46.906 3 4.2402E-38 13111 20230619_1880_Aki_TMTPro18x_K_F1 246.27 233.33 207400 182730 178080 169230 166010 203970 180240 209240 187620 213850 220450 186480 213850 181020 224740 234520 234060 212210 191640 167190 183110 172670 174010 203810 181320 213360 192150 214970 224180 190570 218970 189740 228900 233540 223710 201870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 627730000 80 1462 77 120 109 109 1 9606 Homo sapiens -0.09798365839355938 AADFIDQALAQK Unmodified 1289.6616 0.66156582 2665 K7ES89;B5BUI8;P51452-2;P51452;K7ELG5 DUSP3 Dual specificity protein phosphatase 3 yes no 0 0 0 7 0 1 62.424 62.46 3 0.062968 18923 20230619_1887_Aki_TMTPro18x_K_F7 42.425 13.294 113030 98412 113980 113590 111960 127330 128900 150400 151470 144860 137850 139670 161030 132810 138250 176740 162750 179270 104570 90211 115680 113720 116950 128240 129740 151800 152530 146520 143100 141870 162530 139590 142550 176920 155600 170180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116900000 81 2665 78 121 110 110 1 9606 Homo sapiens 0.028321498723244076 AADFQLHTHVNDGTEFGGSIYQK Unmodified 2534.1826 0.18261541 4704 Q9Y277;Q9Y277-2 VDAC3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 6.5 0.5 1 1 51.371 51.448 4 8.5829E-20 14488 20230619_1886_Aki_TMTPro18x_K_F6 166.06 152.47 54739 49891 51067 59458 73261 68128 69107 71731 64039 56926 52768 59280 75130 59845 51691 70498 60468 55286 50623 45741 52556 59378 74108 68350 69754 72622 65120 58398 55686 60111 74835 62268 53560 69778 57734 52691 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 764670000 82 4704 79 122;123 111 111 1 9606 Homo sapiens -0.02310859188946779 AADFSDPAFLAHTNR Unmodified 1631.7692 0.76921879 2767 CON__ENSEMBL:ENSBTAP00000018574 yes yes 0 0 0 5.5 0.5 1 1 49.688 49.765 3 3.511E-08 13798 20230619_1886_Aki_TMTPro18x_K_F6 140.3 128.87 + 146080 128330 134520 134720 113580 156070 130780 144520 85822 180290 217700 262230 252430 249790 208870 244920 253290 270130 135050 117530 137330 135880 120250 155920 129710 149390 95567 182590 218990 261970 254660 257620 215810 247540 242040 256240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 243650000 83 2767 80 124;125 112 112 1 9606 Homo sapiens -0.0213950526424469 AADGGERPLAASPPGTVK Unmodified 1692.8795 0.87949752 1591 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A669KAV7;O95785-4;O95785-3;A0A2R8YFV2;O95785;B3KR89;O95785-2 WIZ Protein Wiz yes no 0 0 1 6 0 1 40.958 41.053 3 0.0049398 10008 20230619_1886_Aki_TMTPro18x_K_F6 91.078 76.202 38921 31137 34992 41754 41351 47679 44518 39672 51109 49591 54010 53585 50247 48862 56775 51376 64073 60113 35954 28595 36016 41350 42564 47571 44892 41367 51804 49726 55129 54050 51763 50677 57987 52098 61207 57018 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81225000 84 1591 81 126 113 113 1 9606 Homo sapiens 0.06077295004092775 AADIAEALYSVPR Unmodified 1374.7143 0.71432967 3121 I6MBV4;Q9H4W6-2;H0Y3W9;A8K0Z7;B4E2U8;Q658Y5;E5RFQ1;Q9UH73-2;Q9UH73;Q9H4W6;B4E172;A0A087WTE5;Q9HAK2-2 EBF3;DKFZp667I0324;EBF1;EBF2 Receptor protein-tyrosine kinase;Transcription factor COE3;Transcription factor COE1;Transcription factor COE2 no no 0 0 0 7 0 1 61.641 61.68 3 0.0075569 18528 20230619_1887_Aki_TMTPro18x_K_F7 53.377 40.024 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 85 3121 82 127 114 114 1 9606 Homo sapiens 0.04196107935126747 AADIDQEVK Unmodified 987.48729 0.48728985 2126 A8K8U1;Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 2 0.816 1 1 1 43.917 43.968 2 0.0013343 11669 20230619_1881_Aki_TMTPro18x_K_F2 127.4 71.956 175320 92031 192430 197630 239980 253920 203960 222310 235720 206050 311080 330010 275170 252450 275570 164090 330730 329290 161890 85241 194770 191430 244450 251580 208870 228860 241110 212900 314180 326500 282110 258390 282610 175950 315890 311020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 225660000 86 2126 83 128;129;130 115;116 115 2 9606 Homo sapiens -0.0069543055299163825 AADISESSGADCK Acetyl (Protein N-term) 1351.5562 0.55617405 689 F8VVL1;A0A024RBR3;O43583 DENR Density-regulated protein yes no 1 0 0 1 0 1 44.118 44.118 2 1.46E-10 11901 20230619_1880_Aki_TMTPro18x_K_F1 91.584 82.721 101590 69247 96586 101130 105230 115420 112110 113010 134820 109170 124880 120000 135180 115630 103030 115310 150390 139670 93805 63697 98692 99670 108830 115530 113340 115510 135580 110930 128970 121210 136170 119440 108000 117210 143360 132440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309270000 87 689 84 131 117 117 1 9606 Homo sapiens -0.1055417910624783 AADPPAENSSAPEAEQGGAE Unmodified 1896.7973 0.79734361 3745 P67809;H0Y449;A0JLU4;Q7KZ24 YBX1 Nuclease-sensitive element-binding protein 1 yes no 0 0 0 1 0 1 39.725 39.725 3 4.0694E-16 9885 20230619_1880_Aki_TMTPro18x_K_F1 112.16 105.1 40701 31934 40626 45197 49561 53874 50060 43718 52313 53259 57648 48904 63279 45697 49362 47632 58840 50365 37625 29347 41440 44641 50772 53578 50505 45635 53398 53195 59070 49747 63686 47397 50946 48002 56147 47839 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 434950000 88 3745 85 132 118 118 1 9606 Homo sapiens -0.11518316656088246 AADQFDIYSSQQSK Unmodified 1586.7213 0.72126554 4177 Q7Z6I8;Q7Z6I8-2;H0YAE0 C5orf24 UPF0461 protein C5orf24 yes no 0 0 0 4.5 0.5 1 1 51.033 51.086 3 1.2744E-08 14237 20230619_1885_Aki_TMTPro18x_K_F5 150.22 130.64 47755 48072 46522 49432 45890 58956 64345 57297 68947 64927 72352 64422 65799 54949 59854 58404 59534 64487 44211 44000 47395 49960 48270 58856 63923 58861 70074 65201 73728 65108 67061 57195 60945 58988 56999 61167 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91224000 89 4177 86 133;134 119 119 1 9606 Homo sapiens -0.048626239749637534 AADRLPNLSSPSAEGPPGPPSGPAPR Unmodified 2494.2564 0.25644906 2517 O60784-2;O60784;O60784-3;B4DKQ5;O60784-4;B4DJ44;B3KUF5 TOM1 Target of Myb protein 1 yes no 0 0 1 7.5 0.5 1 1 47.081 47.129 3 1.0029E-20 12308 20230619_1888_Aki_TMTPro18x_K_F8 164.96 152.11 11260 7829.9 12554 14037 14467 17376 19408 18285 19708 16038 12434 17527 17291 15039 16602 18958 20296 19007 10412 7221.2 12691 13699 15009 17322 19276 18556 19771 16378 13355 17629 17473 15800 17109 18984 19375 18057 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19932000 90 2517 87 135;136 120;121;122 121 3 9606 Homo sapiens 0.06909108973468392 AADSQNSGEGNTGAAESSFSQEVSR Unmodified 2485.0589 0.05893104 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 1.5 0.5 1 1 42.731 42.772 3 7.4723E-76 11311 20230619_1880_Aki_TMTPro18x_K_F1 311.46 305.49 23001 17299 22825 25762 22231 24723 30082 24784 23861 27771 27030 25565 27306 22349 26531 32896 29072 27288 21256 15909 23216 25297 23327 25072 29675 25415 24804 27828 27596 25962 27819 23715 27168 32555 27779 25984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208890000 91 3440 88 137;138 123 123 1 9606 Homo sapiens -0.1241960681782075 AAEAAAAPAESAAPAAGEEPSK Unmodified 1965.928 0.92796385 3759 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 0 2 0 1 43.692 43.774 3 6.8588E-09 11599 20230619_1881_Aki_TMTPro18x_K_F2 117.48 103.65 11357 11868 15569 16068 11042 13686 10824 11618 17296 17294 19337 29445 24100 27030 14951 34587 37771 53624 10552 10891 15398 15847 11836 13970 11143 12179 17341 17551 20006 29251 24086 28357 16738 35624 36028 50672 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54606000 92 3759 89 139 124 124 1 9606 Homo sapiens -0.01636300937298074 AAEAAAAPAESAAPAAGEEPSKEEGEPK Unmodified 2635.2249 0.22493374 3759 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 1 2 0.707 1 2 1 43.63 43.688 4;5 6.8305E-09 11501 20230619_1881_Aki_TMTPro18x_K_F2 110.01 95.776 232640 192660 231480 229460 163480 197960 158800 141410 183120 236010 271130 273310 262890 214410 243610 245330 284150 259780 215130 176690 234140 228310 175260 201330 161400 151130 188860 234540 273670 273670 267570 224780 250290 246870 271310 246680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2219500000 93 3759 90 140;141;142;143 125;126 126 2 9606 Homo sapiens -0.027269733618595637 AAEAAINILK Unmodified 1012.5917 0.59169534 3310 O75569-3;O75569-2;O75569;A0A7I2YQ87;A0A7I2V5H3;A0A7I2V2P4;F8WEG8;G5E9Q4;A0A7I2V5C2;A0A7I2V3L6;C9JMM3;A0A7I2V315;A0A7I2V593 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes no 0 0 0 8 0 1 57.821 57.873 2 3.1415E-05 16933 20230619_1888_Aki_TMTPro18x_K_F8 154.56 86.173 106210 86340 106400 103770 85610 111210 124280 115920 124240 125640 129350 129360 130330 118510 125150 135580 129990 144820 98210 79196 107780 103500 91700 111970 123070 118370 126770 126560 132540 130800 132780 123490 127690 136470 124430 137400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40992000 94 3310 91 144 127 127 1 9606 Homo sapiens 0.08590315994365483 AAEAAPPTQEAQGETEPTEQAPDALEQAADTSR Unmodified 3379.5288 0.52877991 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 1 0 1 50.432 50.432 4 1.2961E-15 14515 20230619_1880_Aki_TMTPro18x_K_F1 136.44 130.67 17691 15297 19290 22393 20402 24762 23243 23015 22931 27525 27277 21535 27291 24032 29326 27724 28206 24449 16376 14058 19503 22050 21186 24806 23266 23750 23574 27391 27754 22240 27950 24901 29713 27627 26972 23270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135040000 95 2414 92 145 128 128 1 9606 Homo sapiens -0.0658033290583262 AAEAAPPTQEAQGETEPTEQAPDALEQAADTSRR Unmodified 3535.6299 0.62989094 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 1 1 0 1 47.028 47.028 4 1.1396E-10 13158 20230619_1880_Aki_TMTPro18x_K_F1 109.77 88.564 5472.4 5571 5443.9 5448.3 5431 7965.4 6970.5 7893.6 7181.2 7649.6 8999.2 6424.5 8184.9 6821.8 8126.5 11264 8886.5 8709.7 5067.7 5096.9 5536 5549.7 5697.8 7858.6 6949 8054.7 7374.5 7705.7 9095.4 6612.3 8375.9 7256.6 8324.6 11094 8494 8300.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56585000 96 2414 93 146 129 129 1 9606 Homo sapiens -0.03649881203136829 AAEACARPHGPPPDLAAR Unmodified 1855.9111 0.91114877 3968 Q3KQV9;A0A087X226 UAP1L1 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 yes no 0 0 1 5.5 0.5 1 1 33.689 33.752 4 0.010014 7080 20230619_1885_Aki_TMTPro18x_K_F5 75.548 64.602 10814 8954.8 9208.7 14082 16466 16372 12562 18109 18948 14477 16543 20724 18422 16631 15123 16971 23643 18984 9988.1 8238.1 9623.9 13817 16427 16416 13096 18267 18838 15018 17191 20605 18603 17301 15913 17159 22506 18027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48766000 97 3968 94 147;148 130 130 1 9606 Homo sapiens 0.017429644864250804 AAEAGGAEEQYGFLTTPTK Unmodified 1939.9163 0.91633654 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 4.5 1.12 1 1 1 1 55.629 55.677 3 1.2789999999999998E-19 16107 20230619_1885_Aki_TMTPro18x_K_F5 180.78 169.51 420900 326720 371950 476660 355030 378150 387200 449080 444680 500440 581850 573480 593340 534930 560880 611820 570610 682090 388690 300370 382230 467560 371050 391410 390700 455290 455370 505030 590990 577790 603760 557080 571780 617370 546630 646700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1240200000 98 630 95 149;150;151;152 131;132;133 132 3 9606 Homo sapiens -0.016024979606527268 AAEAHVDAHYYEQNEQPTGTCAACITGDNR Unmodified 3348.416 0.41601553 1168 Q86U79;A0A140VJE0;P55263-2;P55263;P55263-3;A0A5K1VW54;A0A5K1VW94;P55263-4;A0A5F9ZH31;A0A5F9ZH72;A0A5F9ZHJ1;A0A5F9ZGZ8 ADK Adenosine kinase yes no 0 0 0 3.5 0.5 1 1 42.363 42.418 4 2.7178999999999997E-21 10700 20230619_1882_Aki_TMTPro18x_K_F3 148.04 145.27 8530.2 6126.3 6943.5 9364.7 6960.9 8066.8 7907.1 12766 11485 11209 8508.2 8882.8 12748 9081.6 10234 11925 13180 11026 7869.5 5637.1 7200.4 9172.6 7268.2 8356.6 8037.8 12658 11390 11335 9056.1 9132.5 12750 9521.7 10621 11882 12567 10490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 210990000 99 1168 96 153;154 134;135 134 2 9606 Homo sapiens -0.16425583384580023 AAEAVAAAVGTGATTAAVMAAAGIAAIGPAK Unmodified 2623.4003 0.4003361 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 6.5 0.5 1 1 68.08 68.112 3 2.3031000000000002E-30 21555 20230619_1886_Aki_TMTPro18x_K_F6 179.79 165.24 16077 9563.5 12123 13129 9106.5 10895 10328 11179 10910 16423 14825 16342 13769 14266 18097 13677 14290 21993 14802 8783.3 12602 12936 9748.4 11032 10245 11544 11263 16302 15001 16504 14302 14757 18094 14231 13763 20773 3 3 4 4 4 3 3 4 4 4 4 4 4 4 4 4 4 4 26262000 100 630 97 155;156 136;137;138;139 137 4 9606 Homo sapiens 0.15357194689340758 AAECNIVVTQPR Unmodified 1356.682 0.68198369 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 5.5 0.5 1 1 41.332 41.422 2 2.1225E-06 10115 20230619_1886_Aki_TMTPro18x_K_F6 153.95 129.15 259730 204720 240340 260040 268780 307880 305120 289920 329620 332010 333510 325290 366420 278620 282370 402230 368930 330060 239960 187910 246350 258670 278030 307240 306250 298540 334670 333070 343300 329130 368790 295530 294040 397820 351880 314400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 931790000 101 3811 98 157;158 140;141 141 2 9606 Homo sapiens 0.0179099726046843 AAEDDEDDDVDTK Unmodified 1436.5427 0.54269205 2720 P06454-2;Q8TBK9;P06454;B8ZZQ6;Q53S24;Q15202;V9HVW6;Q15204;Q86YS2;B8ZZW7;B8ZZA1;Q15200;H7C2N1;Q7Z4R6 PTMA;PTMAP7 Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 0 0 0 1 0 1 39.532 39.532 2 2.3541000000000002E-27 9890 20230619_1880_Aki_TMTPro18x_K_F1 244.12 229.43 16681 13807 35873 27187 62084 41347 39212 34865 26108 17005 29971 35953 21292 24777 75717 10021 31462 40825 15572 12742 35151 26531 61493 40633 40466 35604 27478 18722 30352 35221 24591 25152 73230 12240 30595 38415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38364000 102 2720 99 159 142 142 1 9606 Homo sapiens -0.15811758404538523 AAEDDEDDDVDTKK Unmodified 1564.6377 0.63765507 2720 P06454-2;Q8TBK9;P06454;B8ZZQ6;Q53S24;Q15202;V9HVW6;Q15204;Q86YS2;B8ZZW7;B8ZZA1;Q15200;H7C2N1;Q7Z4R6 PTMA;PTMAP7 Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 0 0 1 1 0 1 39.503 39.503 3 4.4963E-07 9864 20230619_1880_Aki_TMTPro18x_K_F1 137.93 119.57 164370 147290 449370 260060 746290 342590 481550 392480 195110 156690 296210 126920 98932 94310 1023000 22344 124350 92135 154260 135670 435510 254750 739180 342400 492190 391330 219000 169860 291390 129660 150210 94665 968850 30753 127440 86889 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181730000 103 2720 100 160 143 143 1 9606 Homo sapiens -0.12207824933375377 AAEDEEVPAFFK Unmodified 1351.6296 0.62959699 1284 A0A1C7CYX9;A9CQZ4 DPYSL2 yes no 0 0 0 2 0.707 1 2 1 59.006 59.02 2;3 0.00017909 18018 20230619_1882_Aki_TMTPro18x_K_F3 100.69 85.714 109180 104800 98343 128530 78818 86712 98680 102910 106020 122480 102570 89606 120150 99365 96395 148160 111580 114200 100980 96090 100680 127290 83968 91260 98627 104590 107590 121700 106070 92908 120940 104750 99570 146040 106630 108820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 345630000 104 1284 101 161;162;163;164 144;145 145 2 9606 Homo sapiens -0.032152626014976704 AAEDLFVNIR Unmodified 1146.6033 0.60332266 4706 Q9Y2A7;Q9Y2A7-2;A0A994J4I5;A0A994J6K9 NCKAP1 Nck-associated protein 1 yes no 0 0 0 4.5 0.5 1 1 57.186 57.218 2 0.00024217 16780 20230619_1885_Aki_TMTPro18x_K_F5 135.71 103.39 77705 61536 69033 76129 61293 74555 76136 77210 82782 96378 104490 97708 102580 86795 93045 116920 110960 124100 71771 56467 70783 75668 64752 75561 76149 79211 84860 96384 106050 98823 104300 91506 95910 117330 106080 117740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52540000 105 4706 102 165;166 146 146 1 9606 Homo sapiens 0.035885130176893654 AAEDSPYWVSPAYSK Unmodified 1669.7624 0.76240208 2065 Q9NW82;A8K564 WDR70 WD repeat-containing protein 70 yes no 0 0 0 6 0 1 55.662 55.738 3 9.4946E-06 16337 20230619_1886_Aki_TMTPro18x_K_F6 113.72 94.4 24840 19321 26300 22378 21462 31249 32178 28674 35168 30096 31563 35032 33815 31957 36585 37077 35394 34192 22973 17719 26515 22478 23016 30847 31906 29511 35492 30505 32690 35234 34595 33312 37090 37020 33868 32511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43763000 106 2065 103 167 147 147 1 9606 Homo sapiens -0.04568862935479956 AAEEPQQQK Acetyl (Protein N-term) 1069.504 0.50400254 4350 Q96FW1;Q659F9;F5H6Q1;F5GYJ8;F5H3F0 OTUB1;DKFZp564E242 Ubiquitin thioesterase OTUB1 yes no 1 0 0 1 0 1 35.387 35.387 2 0.00012605 8135 20230619_1880_Aki_TMTPro18x_K_F1 110.35 94.203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 107 4350 104 168 148 148 1 9606 Homo sapiens -0.027969296670335098 AAEEPSKVEEK Unmodified 1215.5983 0.59829686 3524 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 1 2.5 1.12 1 1 1 1 38.295 38.335 3 5.4282E-05 9022 20230619_1881_Aki_TMTPro18x_K_F2 115.34 86.366 484940 229140 662440 645010 885490 962270 627370 857310 657220 469050 929840 1069800 334750 743000 758940 245420 923610 821410 448580 213520 661280 620510 894600 945530 649580 872150 677090 513010 916620 1046500 383900 749110 770450 288780 881410 774450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1056399999.9999999 108 3524 105 169;170;171;172 149;150 150 2 9606 Homo sapiens -0.0008783563557699381 AAEGVSAADMAK Unmodified 1119.523 0.52302343 430 A0A024R753;Q9NW13;Q9NW13-2 RBM28 RNA-binding protein 28 yes no 0 0 0 4 0 1 44.482 44.526 3 0.0042725 11507 20230619_1883_Aki_TMTPro18x_K_F4 66.498 52.592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 109 430 106 173 151 151 1 9606 Homo sapiens -0.031957163676679556 AAEISAMLK Unmodified 932.5001 0.50010314 4347 Q99575;Q96F88;E5RK39 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 0 8 0 1 56.281 56.338 3 0.0024891 16329 20230619_1888_Aki_TMTPro18x_K_F8 87.308 58.909 50714 41026 47335 50878 47086 51357 47031 49789 58754 65437 68812 66776 56712 50998 62594 72137 69621 72373 46865 37644 48376 50580 48950 51870 47818 51388 59616 65314 69591 67205 58568 54232 63991 72132 66564 68727 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49758000 110 4347 107 174 152 152 1 9606 Homo sapiens 0.031153093055422687 AAELAVQNEVGLVDNPLK Unmodified 1879.0051 0.005091963 4604 Q9NVM6 DNAJC17 DnaJ homolog subfamily C member 17 yes yes 0 0 0 5 0 1 61.992 62.04 3 0.080041 18839 20230619_1885_Aki_TMTPro18x_K_F5 36.637 15.386 30427 21629 34510 31842 34255 32368 34327 35708 40233 32362 33239 35177 39008 28096 34072 38569 37304 33608 28143 19894 34688 31329 35554 32770 34803 36157 40364 32976 34698 35353 39366 29781 34935 38301 35636 31987 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113810000 111 4604 108 175 153 153 1 9606 Homo sapiens 0.10074962069711546 AAELIANSLATAGDGLIELR Unmodified 1997.0793 0.079319539 2035 Q6FHP5;A8K401;P35232;Q6PUJ7;C9JZ20;C9JW96 PHB;HEL-S-54e Prohibitin yes no 0 0 0 7.2 0.748 1 2 2 66.029 66.055 2;3 5.938E-55 20372 20230619_1888_Aki_TMTPro18x_K_F8 213.69 180.49 23754 19517 20410 26455 21162 26501 25243 25459 27633 25237 31767 30276 32782 25664 28900 27703 26962 35082 21940 17923 21065 26133 21878 26757 25293 26084 28163 25673 32430 30360 33216 26753 29345 28223 25872 33213 3 3 3 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 310280000 112 2035 109 176;177;178;179;180 154;155 155 2 9606 Homo sapiens 0.12066305161238233 AAELLAR Unmodified 742.43374 0.43373813 3651 P54707;P54707-2 ATP12A Potassium-transporting ATPase alpha chain 2 yes no 0 0 0 5 0.816 1 1 1 41.872 41.947 2 0.052122 10328 20230619_1886_Aki_TMTPro18x_K_F6 85.265 0 199790 147000 151850 198890 269530 283700 269480 266490 383040 257740 300500 317610 293930 246030 296030 325240 354590 339560 184250 135060 160340 197580 270850 280010 274940 273130 380050 263020 312030 317370 300390 260320 304380 326270 338600 322420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 782510000 113 3651 110 181;182;183 156 156 1 9606 Homo sapiens 0.052218615258084355 AAELLQDEYSGR Unmodified 1350.6416 0.64155866 1531 D3DVA3;B4DF47;A0A3B3IUD2;A8K3J5;Q9BUK6-7;Q9BUK6-3;Q9BUK6-2;Q9BUK6;A0A8V8TLP0;B4DLS9;Q9BUK6-5 MSTO1 Protein misato homolog 1 yes no 0 0 0 2 0 1 51.23 51.275 2 3.3803E-07 15021 20230619_1881_Aki_TMTPro18x_K_F2 191.52 182.18 43000 35522 44561 43282 39443 46095 52191 48316 50339 56409 55992 52052 61665 48072 55307 64504 58553 53715 39776 32585 45062 43126 41713 46446 51832 49427 51644 56427 57410 52937 62421 50596 56580 63929 55959 51151 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36323000 114 1531 111 184 157 157 1 9606 Homo sapiens -0.019736458583111016 AAELTATQVEEEEEEEDFRK Unmodified 2352.0605 0.06049417 2150 B3KMC2;B3KMD2;A8KAE0;O75717-2;O75717;B3KMD9 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes no 0 0 1 1 0 1 52.355 52.355 4 2.3626E-05 15330 20230619_1880_Aki_TMTPro18x_K_F1 93.371 84.77 26670 22777 24813 27629 27211 29871 27364 26437 30190 27121 28594 27543 33584 29474 31181 31850 23753 25139 24653 20891 25412 27530 28083 29961 27672 27272 30534 27401 29629 28022 33997 30450 31344 31599 22808 23943 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60924000 115 2150 112 185 158 158 1 9606 Homo sapiens -0.06145365781731016 AAEPLLTLER Unmodified 1111.6237 0.62372375 3012 G3V5V3;O60524-4;O60524-5;O60524-3;O60524;G3V4D9 NEMF Nuclear export mediator factor NEMF yes no 0 0 0 4 0 1 52.997 53.017 2 0.0010756 15375 20230619_1883_Aki_TMTPro18x_K_F4 112.8 74.668 97566 80670 103780 108060 101590 116590 118330 126000 122770 115000 120480 108110 123420 103750 113810 135130 137290 138400 90270 74074 104910 107000 106140 117430 118520 127740 124710 116590 123780 110040 125440 108860 117310 135400 131140 131410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108740000 116 3012 113 186 159 159 1 9606 Homo sapiens 0.07237683677522 AAEQYTPK Unmodified 906.4447 0.44469675 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 5.5 0.5 1 1 38.853 38.94 2 0.00034614 9064 20230619_1885_Aki_TMTPro18x_K_F5 180.87 146.87 115300 55162 148030 127820 147980 174070 115160 157480 119930 129050 211090 246000 182380 181470 193680 90664 225570 209730 106590 51191 147500 123620 152830 171940 118470 161170 125470 135400 211300 241940 187720 184490 197910 99613 215400 198000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 111990000 117 3606 114 187;188 160;161 160 2 9606 Homo sapiens -0.012267808905789934 AAETQTLNFGPEWLR Acetyl (Protein N-term) 1773.8686 0.86859848 288 Q6Y7W6;Q6Y7W6-5;Q6Y7W6-4;A0A024R4A5;Q6Y7W6-3;I1E4Y6;E7ESB6;B4DRT8;C9JHW1;B4DLU7;C9JHT0;C9J0V6;C9JXQ0;F8WCD5;C9JPV7;C9JRZ2;C9JW88 GIGYF2;TNRC15 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 1 0 0 3.5 0.5 1 1 64.866 64.876 2 3.4337000000000005E-25 20361 20230619_1883_Aki_TMTPro18x_K_F4 149.96 123.92 2819.3 2272.2 2794.6 3095.9 3610 2614.1 4187 2449 3304.8 3896.9 4472.4 3043.3 3095.3 3641 5192.1 4589.5 2952.6 3868.4 2606.5 2087 2854.3 3051.7 3686.3 2680.3 4156.8 2557.9 3463.5 3835.7 4468.5 3155.2 3306.2 3781.4 5116.8 4558.7 2853 3678.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26880000 118 288 115 189;190 162;163 163 2 9606 Homo sapiens 0.012618926298728184 AAEVLNK Unmodified 743.41775 0.41775372 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;M0R019;M0R2T0;B4DEG4;M0R0N3;M0QYQ7 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 6 0.816 1 1 1 43.755 43.839 2 0.0079067 11162 20230619_1886_Aki_TMTPro18x_K_F6 121.52 52.176 200990 86299 237350 235930 391500 394160 281070 349130 318870 200670 320850 362700 309510 308310 299230 139800 399510 376380 185580 80413 240330 227720 391130 385220 291130 355540 322380 215860 328910 358690 316140 310970 309050 157000 381120 355070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326170000 119 3631 116 191;192;193 164 164 1 9606 Homo sapiens 0.03578155288914786 AAEVPNEELINLLLK Unmodified 1664.9349 0.93488713 4140 Q709C8-4;Q709C8-2;Q709C8-3;Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes no 0 0 0 7 0 1 65.094 65.121 3 0.035549 20109 20230619_1887_Aki_TMTPro18x_K_F7 46.926 24.047 20796 15085 18053 21430 17665 22392 20649 18813 20421 21285 26166 27011 25744 24476 27026 24484 24592 26794 19195 13868 18585 21120 18485 22475 20644 19548 21042 21556 26571 27074 26358 25319 27311 24746 23568 25417 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34713000 120 4140 117 194 165 165 1 9606 Homo sapiens 0.12901708471918027 AAEVYTR Unmodified 808.40792 0.40791731 4171 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7EPS6;K7ERA4 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 0 0 0 3.5 0.5 1 1 34.201 34.257 2 0.023523 7223 20230619_1883_Aki_TMTPro18x_K_F4 100.45 53.384 109200 54103 130800 127750 180440 206650 135780 162050 146580 92141 162310 182350 123180 132970 167000 60432 167920 146990 100890 50215 131800 123820 182310 201750 139950 166690 149080 99683 164300 179190 129220 134880 168480 67124 160510 138770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76844000 121 4171 118 195;196 166;167 167 2 9606 Homo sapiens -0.003950327164716327 AAEWQLDQPSWSGR Unmodified 1629.7536 0.75356872 2594 B4DUR7;F6SKB8;Q53FE5;Q9NVZ3-3;Q9NVZ3;Q9NVZ3-2;D6RAN6;H0Y970 NECAP2 Adaptin ear-binding coat-associated protein 2 yes no 0 0 0 5.5 0.5 1 1 55.269 55.339 2 3.0352E-08 16190 20230619_1886_Aki_TMTPro18x_K_F6 156.69 134.16 15248 11599 14015 12317 11329 17520 17186 16563 17090 17456 17486 16024 17799 15047 20153 17304 16965 20260 14084 10630 14298 12459 12175 17289 16986 17004 17431 17550 17936 16304 18262 15682 20261 17526 16286 19200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40113000 122 2594 119 197;198 168 168 1 9606 Homo sapiens -0.03611791781304419 AAEYIAK Unmodified 764.40685 0.40685468 1386 P15882;P15882-3;A0A2X0SFY7;A0A494C0I5;F8WCQ9;A0A494BZY1;A0A494C0I4;C9J1N1 CHN1 N-chimaerin yes no 0 0 0 6.5 0.5 1 1 47.765 47.849 2 0.05083 12910 20230619_1886_Aki_TMTPro18x_K_F6 85.849 25.698 108470 82603 96646 107960 114160 133910 127590 126890 157210 123360 148730 167160 146180 125910 132150 136820 179420 170990 100160 75852 99517 107260 117690 133240 128740 130030 157990 126240 153000 166250 148670 131830 137250 139220 171150 162080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232690000 123 1386 120 199;200 169 169 1 9606 Homo sapiens 0.015227529146159213 AAFALGGLGSGFASNR Unmodified 1494.7579 0.75792582 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 6 0 1 60.217 60.274 3 2.3845E-08 18223 20230619_1886_Aki_TMTPro18x_K_F6 135.14 117.77 20970 17365 21141 23571 24435 26373 25228 24324 25911 23044 21560 23770 23315 22983 26006 24923 26275 29880 19393 15947 21526 23323 25131 26405 25409 24962 26189 23387 22431 24066 23893 23832 26407 25295 25163 28314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81639000 124 2980 121 201 170 170 1 9606 Homo sapiens 0.030337174322994542 AAFAPFGR Unmodified 835.43407 0.43407249 2994 F8W8I6;Q59G98;P31483;C9JTN7;P31483-3;P31483-2;E5RGV5;H7BY49 TIA1 Nucleolysin TIA-1 isoform p40 yes no 0 0 0 3.5 0.5 1 1 49.905 49.96 2 0.010841 13955 20230619_1883_Aki_TMTPro18x_K_F4 97.596 78.866 263010 226690 235660 239330 294740 370910 315960 318440 396050 138130 153830 153190 156400 141180 217140 155570 201530 179450 243070 207640 242680 242460 302590 363750 319570 324030 388410 150260 169500 154620 162610 146790 218520 157640 192820 170270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 120890000 125 2994 122 202;203 171;172 172 2 9606 Homo sapiens 0.009772812456731117 AAFDDAIAELDTLSEESYK Unmodified 2086.9583 0.95826093 3709 V9HW98;P62258;G9K389;G9K388;P62258-2;B7ZA86;K7EM20 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 0 0 3.5 1.71 1 1 1 1 1 1 65.876 65.899 3 4.452E-20 21161 20230619_1881_Aki_TMTPro18x_K_F2 189.59 180.99 59150 48980 51630 54885 44014 53971 51912 52833 50185 68308 69749 72985 72876 68607 66822 71201 77292 82995 54641 44894 52980 54949 46582 54626 51875 54475 52079 68314 70807 73706 74033 71041 68658 72161 73891 78684 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 244520000 126 3709 123 204;205;206;207;208;209 173;174;175 174 3 9606 Homo sapiens -0.04173987062722517 AAFGEEVDAVDTGISR Unmodified 1635.774 0.77402939 296 A0A024R4H5;Q53HN4;O00273-2;O00273 DFFA DNA fragmentation factor subunit alpha yes no 0 0 0 1.5 0.5 1 1 54.705 54.717 3 9.767E-26 16483 20230619_1881_Aki_TMTPro18x_K_F2 225.85 208.6 91124 80987 90953 96808 82827 97130 97092 93412 108800 94512 107330 98375 97351 94629 95222 117610 97143 111910 84304 74258 92328 96483 87108 98108 97449 95751 110040 95616 109700 99658 99652 98887 97107 117430 93029 106300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 551270000 127 296 124 210;211 176 176 1 9606 Homo sapiens -0.018426659121587363 AAFGISDSYVDGSSFDPQR Unmodified 2017.9017 0.9017491 1230 Q9UQ35;A0A140VK53;Q9UQ35-2;I3L4D8;I3L182;Q9UQ39;Q05CV9;Q05BI2;I3L1I8;Q9UQ35-3;A0A087X1W1;I3L1C0;A0A994J493 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 5 0 1 59.813 59.865 3 2.6452000000000002E-24 17840 20230619_1885_Aki_TMTPro18x_K_F5 199.08 182.96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 128 1230 125 212 177 177 1 9606 Homo sapiens -0.06648570108791318 AAFGLSEAGFNTACVTK Unmodified 1742.8298 0.82977013 21 A0A024QZ30;P31040;P31040-2;D6RFM5;Q0QF12;P31040-3;B4DYN5;A0A494C1T6 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 1.5 0.5 1 1 59.872 59.879 3 3.1579E-09 18456 20230619_1880_Aki_TMTPro18x_K_F1 129.01 111.52 57139 49237 65167 71996 59000 66492 79423 66397 65820 74691 73364 75964 83798 75271 80860 102060 67839 85703 52914 45249 65496 70739 62250 67632 78465 68121 68174 75067 75423 77088 85059 79038 81686 101150 65157 81509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 594610000 129 21 126 213;214 178 178 1 9606 Homo sapiens -0.011931559961794846 AAFGQGSGPIMLDEVQCTGTEASLADCK Unmodified 2912.299 0.29904343 1081 A0A0S2Z3Y1;Q08380;K7ESM3;K7EKQ5;K7EP36;K7ERZ6;K7EJD3 LGALS3BP Galectin-3-binding protein yes no 0 0 0 5 0 1 61.925 61.973 4 0.027061 18784 20230619_1885_Aki_TMTPro18x_K_F5 46.296 27.736 114050 88413 131600 124340 100720 106190 123300 110550 148030 118590 131380 125270 115000 123580 117700 140210 105950 156960 105560 81248 131700 122390 107610 108850 123800 112940 148600 119700 134840 126880 118180 128320 119140 141500 101840 148720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89673000 130 1081 127 215 179 179 1 9606 Homo sapiens -0.08061412857887262 AAFNSGK Unmodified 693.34459 0.34458878 3382 V9HVZ4;P04406;Q2TSD0;B4DRV9 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 5.33 3.09 1 1 1 38.836 38.853 2 0.011039 8989 20230619_1888_Aki_TMTPro18x_K_F8 117.18 72.757 862390 329380 1374300 1313400 2186500 1870800 1480700 2230200 1135800 581700 1617200 1924100 782640 1232400 1793800 289290 1601400 1419300 798690 310270 1364500 1251400 2181100 1856200 1526100 2207200 1192500 715770 1604200 1867600 876700 1242100 1787100 374390 1532800 1336700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1583999999.9999998 131 3382 128 216;217;218 180;181;182 182 3 9606 Homo sapiens -0.01434973433720188 AAFTAFEEAQLPR Unmodified 1449.7252 0.72522871 465 Q96CT7;A0A024R7M8 CCDC124;LOC115098 Coiled-coil domain-containing protein 124 yes no 0 0 0 6 0.707 1 2 1 59.668 59.723 2;3 4.3341E-11 17982 20230619_1886_Aki_TMTPro18x_K_F6 182.41 146.03 167020 129110 138580 167970 120660 149430 174030 155790 165810 200400 165900 178400 186630 153680 161900 218710 201840 195890 154160 118540 143090 166160 128320 152620 172090 159990 169600 199390 171220 181230 188660 162790 167590 217280 192690 186320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 393970000 132 465 129 219;220;221;222 183;184;185 184 3 9606 Homo sapiens 0.018355103094108927 AAFTAGR Unmodified 692.36057 0.36057319 4174 Q7Z508;Q9UHY7;D6RA00 ENOPH1 Enolase-phosphatase E1 yes no 0 0 0 1 0 1 35.245 35.245 2 0.046001 8100 20230619_1880_Aki_TMTPro18x_K_F1 88.029 64.505 85839 56695 94210 110770 94256 107610 93856 103100 103880 93360 129580 125090 118780 103760 116870 67145 139860 109300 79341 52368 95102 107260 97901 108850 95050 105410 106200 95841 131240 124760 121500 105830 119850 70613 133380 103480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83412000 133 4174 130 223 186 186 1 9606 Homo sapiens 0.002087328031848301 AAFVLPEFAR Unmodified 1119.6077 0.60767975 3479 P19623;K7EL89 SRM Spermidine synthase yes no 0 0 0 1.5 0.5 1 1 61.575 61.58 2 3.6679E-05 19107 20230619_1880_Aki_TMTPro18x_K_F1 180.03 69.72 581400 478160 515680 612170 400840 493630 506520 501180 545740 659030 627180 629710 665310 581270 643200 757760 672440 688740 537120 438860 528170 605560 428850 508280 506120 516000 557560 656480 641440 639060 676850 610400 656700 754460 643220 654840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 660610000 134 3479 131 224;225 187;188 187 2 9606 Homo sapiens 0.05266022231262468 AAGAGAAK Unmodified 615.33402 0.33402409 3461 P16401;Q14463 HIST1H1B Histone H1.5 yes no 0 0 0 6 0 1 31.613 31.646 2 0.027556 6387 20230619_1886_Aki_TMTPro18x_K_F6 82.263 22.622 4730 13035 10635 5760.8 7424.3 7448.1 5270.3 6126.9 7204.7 8001 9886 8245.3 7373.7 7938 7893.3 5160.1 8767.9 6564.2 4483.6 11850 10230 6472.1 7890.6 7401.6 5517.2 6396.9 7338.6 7994 9894.9 8345.5 7639.7 8046.1 8049.3 5320.8 8365.4 6227.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2470100 135 3461 132 226 189 189 1 9606 Homo sapiens 0.010970439118523245 AAGARPLTSPESLSR Unmodified 1511.8056 0.80560429 731 P46379-3;P46379;P46379-2;A0A7I2V508;A0A0G2JK23;A0A024RCR6;A0A1U9X7A6;A0A1U9X7A9;A0A7P0MQS5 BAG6;BAT3 Large proline-rich protein BAG6 yes no 0 0 1 4.5 3.5 1 1 37.507 37.5 3 2.9449E-14 8966 20230619_1880_Aki_TMTPro18x_K_F1 187.01 132.48 90932 81844 79684 78507 85067 89292 92867 89065 95258 96013 105140 90347 103160 86520 94637 102750 112500 97115 84049 74896 81951 79775 88120 89538 93269 91186 97308 96490 107230 91918 104950 90240 97406 102670 107360 92357 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133230000 136 731 133 227;228 190;191 190 2 9606 Homo sapiens 0.07017371632468894 AAGASDVVLYK Unmodified 1092.5815 0.58152458 4414 Q9BR63;Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 6.67 0.471 1 2 50.023 50.104 3 0.00016205 13653 20230619_1887_Aki_TMTPro18x_K_F7 114.5 62.769 299450 226700 267240 318250 311240 318190 321600 318180 377170 357600 374550 367020 427390 331650 352870 425890 394790 410820 276520 208340 275100 313750 320020 321760 325370 326160 381040 359620 386620 371130 430780 348390 362850 425400 377440 390300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 827070000 137 4414 134 229;230;231 192;193 193 2 9606 Homo sapiens 0.038937082691290925 AAGCDFTNVVK Unmodified 1180.5547 0.55465791 574 A0A024R9H2;P52758;H0YBX3;H0YB34 HRSP12 Ribonuclease UK114 yes no 0 0 0 7 0 1 49.302 49.386 2 7.697E-06 13309 20230619_1887_Aki_TMTPro18x_K_F7 170.5 130.07 115490 83755 93362 90532 93093 112220 80659 80265 102490 117150 120030 137410 142390 109220 99810 158370 145740 153910 106550 76784 96640 91178 96568 111120 82792 85210 104000 117040 123360 137620 142550 116230 105100 157910 139050 146210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116760000 138 574 135 232 194 194 1 9606 Homo sapiens -0.02839723613692513 AAGDTTVIENSDVSPETESSEK Unmodified 2265.0132 0.013209626 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7;B3KWP6;B7Z6P3;H0YJP2 KTN1 Kinectin yes no 0 0 0 1 0 1 47.451 47.451 3 5.9669E-39 13317 20230619_1880_Aki_TMTPro18x_K_F1 242.18 226.24 40401 30961 37261 46559 35795 36932 35748 40901 42522 47665 55013 63447 57834 51686 53878 62450 64286 65622 37319 28475 38135 45587 37293 38163 36296 41708 43455 48266 56037 63283 58771 54252 55478 62737 61417 62290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103710000 139 380 136 233 195 195 1 9606 Homo sapiens -0.06869645052756823 AAGGDHGSPDSYR Acetyl (Protein N-term) 1330.5538 0.55380628 914 P30566;A0A7P0T9A7;A0A7P0Z472;A0A096LNY6;X5D8S6;A0A1B0GTJ7;A0A1B0GWJ0;B4DP46;A0A0A6YY92;Q71UA4;A0A7P0T8E4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;X5D2Z4;X5DP48;P30566-2;A0A096LP92;A0A096LNY4;A0A096LP72;B4DEP1;X5D7V4;A0A1W2PRX2;X5D7W4 ADSL Adenylosuccinate lyase yes no 1 0 0 2 0 1 27.633 27.709 2 0.0012955 4904 20230619_1881_Aki_TMTPro18x_K_F2 59.542 53.715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 140 914 137 234 196 196 1 9606 Homo sapiens -0.09824846729020464 AAGGFTHDELLK Unmodified 1257.6354 0.63535107 3663 Q6PJJ2;P56182;Q53FR7;B4DZM3 RRP1 Ribosomal RNA processing protein 1 homolog A yes no 0 0 0 4.5 0.5 1 1 46.662 46.722 3 4.1236E-05 12370 20230619_1885_Aki_TMTPro18x_K_F5 118.88 83.468 134990 106550 125620 126140 116070 128420 137650 126830 186060 158940 146560 137570 181080 137000 117180 199380 173990 181530 124720 97728 128250 125850 122000 129680 139000 130560 185220 158360 153590 140740 180640 144720 123870 198080 165970 172580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251890000 141 3663 138 235;236 197 197 1 9606 Homo sapiens 0.016838807008298318 AAGHEPHLLAR Unmodified 1170.6258 0.62578944 4366 Q96IR7 HPDL 4-hydroxyphenylpyruvate dioxygenase-like protein yes yes 0 0 0 5.5 0.5 1 1 30.783 30.814 3 4.6437E-06 6069 20230619_1886_Aki_TMTPro18x_K_F6 125.74 87.384 27709 19672 29857 32259 39000 36448 39078 46478 35705 30693 37980 34755 34356 28978 41316 24416 30640 29206 25617 18118 30300 31593 39710 36758 39312 46336 36635 31968 38703 34909 35488 29847 41206 24940 29409 27694 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24929000 142 4366 139 237;238 198;199 199 2 9606 Homo sapiens 0.047301572059723185 AAGHPGDPESQQR Unmodified 1348.612 0.61198986 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 1.5 0.5 1 1 23.105 23.141 3 0.056532 3813 20230619_1881_Aki_TMTPro18x_K_F2 43.405 29.499 15769 12679 13860 15366 20573 23226 24321 23679 19049 17897 23345 24085 18931 16622 24647 18114 26161 21995 14565 11631 14357 15401 20927 22894 24134 23998 19860 18574 23579 23916 19736 17469 25007 18418 24987 20866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71585000 143 1292 140 239;240 200 200 1 9606 Homo sapiens -0.048371650837680136 AAGNESFR Unmodified 850.39333 0.39332988 3941 Q15785;Q6ZPD0 TOMM34 Mitochondrial import receptor subunit TOM34 yes no 0 0 0 2.5 0.5 1 1 32.14 32.218 2 0.019685 6477 20230619_1882_Aki_TMTPro18x_K_F3 89.296 46.172 16511 8742.5 20829 21539 28098 30549 27695 29313 21810 29975 74873 89029 57940 60373 55094 25898 75438 88850 15267 8117.7 20918 20793 28563 30151 27809 30069 24595 32009 73669 86623 59594 61397 57032 30201 72074 83674 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51445000 144 3941 141 241;242 201;202 202 2 9606 Homo sapiens -0.037851048646189156 AAGNPGSLAAPIDHKPCSAPLEPK Unmodified 2397.2111 0.21107877 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;Q14676-3;B4DYH4 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 1 8 0 1 47.353 47.411 4 3.1672E-19 12466 20230619_1888_Aki_TMTPro18x_K_F8 156.89 135.29 42934 40195 43231 48318 33089 41278 43206 43650 42534 48416 39835 34877 55116 37619 36283 49386 46583 40088 39738 36851 43773 48042 35469 42327 42979 44565 43320 48252 41618 36138 54816 39382 37863 48881 44426 38198 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71964000 145 1308 142 243 203 203 1 9606 Homo sapiens 0.06836167186656894 AAGPLLTDECR Unmodified 1201.5761 0.57612163 1640 A0A6Q8PH91;Q9BQ69 MACROD1 O-acetyl-ADP-ribose deacetylase MACROD1 yes no 0 0 0 3.5 0.5 1 1 44.051 44.107 2 3.828E-23 11404 20230619_1882_Aki_TMTPro18x_K_F3 258.47 231.17 108420 97125 96740 98296 106260 118510 142300 135990 141090 133520 158680 178630 160040 158830 168960 178790 197220 207440 100220 88920 99434 99529 110580 118740 141320 137650 144430 136430 162240 178630 163910 165460 173270 180920 188500 196690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290230000 146 1640 143 244;245 204 204 1 9606 Homo sapiens -0.016603385849975894 AAGQYSTSYAQQK Unmodified 1401.6525 0.6524577 2865 O60313-2;E5KLM1;O60313-10;E5KLL9;E5KLJ9;O60313-9;A0A2R8YE54 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 8 0 1 40.663 40.655 3 6.2943E-08 9745 20230619_1888_Aki_TMTPro18x_K_F8 154.28 126.42 30357 20048 28178 35392 39199 50874 40748 45095 58357 29778 35913 34896 35784 28568 38607 24671 37173 34147 28019 18490 29031 34643 39982 50079 41514 46037 57454 31128 37896 34979 36653 29493 39048 25435 35560 32344 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27063000 147 2865 144 246 205;206 205 2 9606 Homo sapiens -0.03230243484017592 AAGTAAALAFLSQESR Acetyl (Protein N-term) 1604.8158 0.81583463 3311 O75607 NPM3 Nucleoplasmin-3 yes yes 1 0 0 7 0.816 1 1 1 65.452 65.481 2 4.2919E-107 20548 20230619_1886_Aki_TMTPro18x_K_F6 241.92 211.1 71204 120020 78408 91104 78375 79744 66670 116150 92773 92585 105570 79044 110640 83627 113840 96223 141320 99435 66331 109470 79097 94405 81077 82481 68886 115350 93562 94359 107770 81158 112870 86856 117100 96734 134660 94563 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 648230000 148 3311 145 247;248;249 207;208;209 207 3 9606 Homo sapiens 0.03761934567069147 AAGTCGVLLR Unmodified 1016.5437 0.54369929 1593 A0A669KAX9;Q5T653;A0A024RD44 MRPL2 39S ribosomal protein L2, mitochondrial yes no 0 0 0 1.5 0.5 1 1 42.747 42.787 2 0.0059164 11335 20230619_1880_Aki_TMTPro18x_K_F1 88.177 46.525 102940 86103 98617 111110 115160 135260 131980 133880 152780 120150 109010 113580 123780 100650 107740 118470 136020 117500 95169 79027 100890 110450 118840 134870 132680 136470 152670 122020 114580 115160 125130 105220 111450 118690 129740 111680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88036000 149 1593 146 250;251 210 210 1 9606 Homo sapiens 0.03608918802683547 AAGTDGSDFQHR Unmodified 1260.5483 0.54832698 1519 A0A3B3ITE9;Q8N5M9 JAGN1 Protein jagunal homolog 1 yes no 0 0 0 2 0.707 1 2 1 30.133 30.187 3 8.590099999999999E-21 5664 20230619_1882_Aki_TMTPro18x_K_F3 216.53 184.01 52645 28814 71845 73687 118470 120460 66168 88286 74976 49980 70826 88597 66701 61924 87046 36651 92413 79017 48726 26770 72062 71217 117850 117440 70108 91326 75687 53772 72854 87186 69216 63431 88157 39781 88276 74651 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144430000 150 1519 147 252;253;254;255 211;212;213 213 3 9606 Homo sapiens -0.07152525520859854 AAGTLYTYPENWR Acetyl (Protein N-term) 1582.7416 0.74160705 3510 Q53YD7;P26641;B4DUK7;B4DSR4;Q2F838 EEF1G Elongation factor 1-gamma yes no 1 0 0 4.5 1.12 1 1 1 1 61.758 61.792 2 4.8507E-36 18671 20230619_1885_Aki_TMTPro18x_K_F5 213.31 195.79 110660 97627 107270 103510 100420 118200 114670 127200 144690 118160 118230 113370 129470 118000 119770 142950 129920 151000 102340 89419 109130 104330 105340 118620 115750 129020 144590 119810 123010 115560 131400 122880 122660 143630 124350 143260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2959199999.9999995 151 3510 148 256;257;258;259 214;215;216 215 3 9606 Homo sapiens -0.02645408524472259 AAGVDCGDGVGAR Acetyl (Protein N-term) 1245.5408 0.54079876 869 Q5TBB1;A0A2R8YCP1;Q8N451;A0A2R8Y6Y1;A0A2R8YGP2;A0A2R8YCJ4;A0A087WZJ6;A0A2R8Y761;A0A2R8YCX2;A0A2R8Y883;A0A2R8Y7R8;Q5TBB1-2;A0A2R8YEQ4;A0A2R8YEB4;A0A2R8Y7A3 RNASEH2B Ribonuclease H2 subunit B yes no 1 0 0 1 0 1 37.464 37.464 2 0.0097521 8968 20230619_1880_Aki_TMTPro18x_K_F1 54.259 54.259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 152 869 149 260 217 217 1 9606 Homo sapiens -0.07215001112786013 AAGVEAAAEVAATEIK Acetyl (Protein N-term) 1541.7937 0.7937022 3631 P52272-2;P52272;A0A087X0X3;M0R019;M0R2T0;B4DEG4;M0R0N3;M0QYQ7;M0R0Y6 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 1 0 0 2.5 1.12 1 1 1 1 64.935 64.947 2 2.9025999999999997E-52 20763 20230619_1881_Aki_TMTPro18x_K_F2 155.97 126.5 372550 266910 323950 410340 329470 450160 399990 408660 511970 475830 448420 511030 551620 486850 415520 606170 581620 670790 343850 245620 333860 402800 344660 450810 402610 422170 512780 478550 467870 516360 553590 509350 435170 610210 555500 636110 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1476899999.9999998 153 3631 150 261;262;263;264 218;219;220;221 219 4 9606 Homo sapiens 0.04447710098611424 AAGVNVEPFWPGLFAK Unmodified 1701.8879 0.88787736 372 Q7Z612;A0A024R608;P05386;Q6ICQ4;Q6FG99 RPLP1 60S acidic ribosomal protein P1 yes no 0 0 0 3.5 0.5 2 2 64.634 64.655 3;4 2.8364E-08 20377 20230619_1882_Aki_TMTPro18x_K_F3 133.14 122.28 538700 464890 526650 564250 481130 597510 557600 608840 591910 711630 640020 907460 393620 780980 382110 906720 487030 754940 498200 426370 535610 562180 505920 601810 559200 623910 603460 719300 645350 907240 412200 813830 397700 899210 466830 717670 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3794899999.9999995 154 372 151 265;266;267;268 222;223;224;225 222 4 9606 Homo sapiens 0.0650089371138165 AAGYDLYSAYDYTIPPMEK Unmodified 2166.982 0.98197326 3541 P33316-2;H0YNW5;P33316;H0YKC5;H0YNJ9;H0YMM5;A0A0C4DGL3;H0YKI0 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes no 0 0 0 6 1.29 1 1 2 1 1 62.796 62.832 3;4 7.9701E-11 19076 20230619_1887_Aki_TMTPro18x_K_F7 140.81 130.18 335670 290410 352050 356110 289830 354880 361410 320480 324270 417860 416880 400330 495560 337920 444600 462000 417830 441430 310630 266370 355400 354260 307950 358140 359260 332580 336610 416370 426770 405190 500160 357590 451620 461070 400200 419400 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 862390000 155 3541 152 269;270;271;272;273;274 226;227;228;229 228 4 9606 Homo sapiens -0.05483844829905138 AAHLCAEAALR Unmodified 1181.5975 0.59752577 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2;F8VR77;F8W0A3;H0YIN7 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 5 2 1 1 1 1 1 1 1 37.354 37.407 3 4.6011E-17 8212 20230619_1887_Aki_TMTPro18x_K_F7 176.65 160.76 644970 450180 564010 630320 647170 617100 658140 675520 748890 692900 780440 669790 787380 587830 679890 742470 793310 699370 595220 413850 581190 621480 665440 626480 665880 686520 758900 698620 798700 678790 797760 617600 699810 741070 757280 665060 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 2346700000 156 654 153 275;276;277;278;279;280;281 230;231;232;233;234;235 235 6 9606 Homo sapiens 0.013990912343615491 AAHSEGNTTAGLDMR Oxidation (M) 1545.6842 0.68416853 3756 V9HW96;P78371;P78371-2;B7Z4R3;Q9H369 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 1 0 3.5 1.2 2 4 2 1 1 29.158 29.235 3 3.2694E-07 5230 20230619_1881_Aki_TMTPro18x_K_F2 121.13 108.77 61747 33961 56241 62474 71615 64980 64217 70193 77163 72615 83218 78892 82578 66930 67416 71053 89330 86726 56937 31347 57837 60740 72892 65628 65602 71398 78114 73442 85016 79404 83571 69693 70045 72205 85240 82216 10 9 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 879190000 157 3756 154 282;283;284;285;286;287;288;289;290;291 236;237;238;239;240;241;242;243;244;245;246 236 2422 11 9606 Homo sapiens -0.06684618792360197 AAHSEGNTTAGLDMR Unmodified 1529.6893 0.68925391 3756 V9HW96;P78371;P78371-2;B7Z4R3;Q9H369 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 3 0.816 1 1 1 33.293 33.354 3 2.3918999999999998E-52 6895 20230619_1882_Aki_TMTPro18x_K_F3 304.37 290.28 170840 70269 153230 183240 192130 185830 178600 184890 204730 190870 217800 221540 217480 185380 178500 233560 228970 215020 157340 65431 157840 175550 195980 187540 181710 189140 207590 193510 222810 222360 220160 194900 185280 232740 218490 204480 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1278300000 158 3756 154 292;293;294 247;248;249;250 248 4 9606 Homo sapiens -0.054403149297513664 AAHTEDINACTLTTSPR Unmodified 1856.8687 0.86867484 1100 P04049-2;A0A8I5KQV4;C7TPG7;A0A0S2Z559;L7RRS6;A0A8I5KSV6;A0A0S2Z4L5;A0A8I5KTA5;A0A8I5KWF7;A0A8I5KSB0;B4E0X2;B4E1N6;H7C155;D7PBN3;P04049;A0A8I5QKZ6 RAF1;SRGAP3:RAF1 RAF proto-oncogene serine/threonine-protein kinase yes no 0 0 0 4 0 1 39.632 39.675 3 1.324E-18 9442 20230619_1883_Aki_TMTPro18x_K_F4 183.7 175.61 27470 17615 25716 25625 35056 43403 33755 32035 36811 27175 37341 36985 35227 32091 39132 26991 42613 35330 25353 16207 26418 25436 35680 42251 34195 33378 37305 28052 38205 36934 36222 32990 39842 27718 40688 33495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41006000 159 1100 155 295 251 251 1 9606 Homo sapiens -0.02548475432467967 AAIDWFDGK Unmodified 1021.4869 0.48689592 2041;4307 Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637-2;P35637;Q70T18;Q92804-2;Q92804;B4E312;A0A0J9YYE0 FUS;TAF15 RNA-binding protein FUS;TATA-binding protein-associated factor 2N no no 0 0 0 6.22 1.31 1 2 2 2 2 61.435 61.473 2;3 0.00061225 18539 20230619_1885_Aki_TMTPro18x_K_F5 108.98 33.599 2325000 2053900 2413300 2433300 2513900 3147100 2861600 2859300 2932200 3248700 3104000 3073400 3385300 2981200 2807500 3574000 2642100 3492600 2151600 1883100 2446600 2435900 2614700 3120700 2867800 2950400 2992400 3256800 3188500 3125500 3418700 3109300 2860600 3575300 2535400 3315000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7430299999.999999 160 2041;4307 156 296;297;298;299;300;301;302;303;304 252;253;254 252 3 9606 Homo sapiens -0.022988054821894366 AAIEAFNK Unmodified 862.45487 0.45486751 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;B3KMI9 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 0 7 0 1 49.461 49.545 2 0.0056633 13364 20230619_1887_Aki_TMTPro18x_K_F7 121.62 62.702 566220 421030 515850 553710 603320 670680 666420 672560 793310 697570 765240 765240 794470 647900 662490 847960 963340 898860 522890 386690 529830 549780 621730 669230 672090 687490 799580 705840 787580 770130 803830 682970 693570 851130 918370 853430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154300000 161 4661 157 305 255;256 255 2 9606 Homo sapiens 0.018138268346547193 AAIGLLAR Unmodified 783.49667 0.49667274 3401 P07741;H3BQZ9;P07741-2;H3BQB1;H3BQF1;H3BSW3 APRT Adenine phosphoribosyltransferase yes no 0 0 0 3 0 1 49.424 49.502 2 0.0010532 13877 20230619_1882_Aki_TMTPro18x_K_F3 150.07 25.744 247120 185010 199210 213490 204850 281590 234880 225440 281560 250120 226330 210200 250670 200400 243320 282100 251530 195620 228010 169690 206590 214140 213770 278170 236470 234820 282000 250390 235810 215020 254670 211320 248200 277250 240200 186920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 673340000 162 3401 158 306 257 257 1 9606 Homo sapiens 0.09626427313833119 AAIISAEGDSK Unmodified 1060.5401 0.5400537 2035 Q6FHP5;A8K401;P35232;Q6PUJ7;Q53FV0;C9JZ20;C9JW96 PHB;HEL-S-54e Prohibitin yes no 0 0 0 4 0.707 1 2 1 45.666 45.721 2;3 4.0403E-11 11948 20230619_1885_Aki_TMTPro18x_K_F5 190.96 148.85 270890 196080 292100 298810 284130 321930 338850 338230 362040 318070 355350 317530 363800 299590 323990 364010 412170 416890 250460 180410 294930 293560 297190 323990 339250 343860 367070 322580 365020 322050 369170 313210 335240 367570 393540 395390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1490199999.9999998 163 2035 159 307;308;309;310 258;259;260 260 3 9606 Homo sapiens 0.012205275098040147 AAILGDTIMVAK Acetyl (Protein N-term) 1243.6846 0.68460945 4260 Q8NI60;A1L377 ADCK3;CABC1 Atypical kinase ADCK3, mitochondrial yes no 1 0 0 5.5 0.5 1 1 65.652 65.695 2 1.816E-17 20625 20230619_1886_Aki_TMTPro18x_K_F6 92.062 43.559 43103 33211 41961 49641 51102 58509 57483 58420 66123 52532 57599 52958 55011 53908 52048 60901 56859 70419 39833 30542 42917 48871 52550 58458 57839 59520 66484 53451 59355 53819 56142 55934 53299 61591 54450 66734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126470000 164 4260 160 311;312 261 261 1 9606 Homo sapiens 0.07251452665468605 AAIQDGLLGMFLK Unmodified 1375.7534 0.75335771 3095 H7C5A2 EMC1 yes yes 0 0 0 3 0 1 65.434 65.468 3 0.01805 20742 20230619_1882_Aki_TMTPro18x_K_F3 60.157 30.81 7575.8 5300.7 6667.7 6675.6 5150.7 7265.9 6325.4 7549.8 6713.5 8798.1 8746.7 9109.3 7241.3 8010.2 6996.5 8144.3 7808.5 9241.8 6991.8 4867.4 6827.1 6638.1 5516.5 7304.6 6330.1 7722.4 6905.4 8828.4 8814.8 9191.1 7438.6 8299.4 7170.9 8241.1 7473.2 8761 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8871400 165 3095 161 313 262 262 1 9606 Homo sapiens 0.08051116965157235 AAITTLK Unmodified 716.44324 0.44324019 4064 Q5TDG3;Q9UNX4 WDR3 WD repeat-containing protein 3 yes no 0 0 0 1.5 0.5 1 1 46.354 46.393 2 0.011512 12780 20230619_1881_Aki_TMTPro18x_K_F2 116.54 43.503 191320 120820 153030 201610 203680 211660 193710 178830 246250 221760 227780 262890 245990 214250 226940 239090 306470 277800 176360 111370 159670 196870 207370 212450 197430 186220 247160 223160 235600 263200 249720 223940 235530 242000 292260 263550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78289000 166 4064 162 314;315 263 263 1 9606 Homo sapiens 0.07367629811335519 AAIVYHTK Unmodified 901.50215 0.50215205 4166 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 0 2 0 1 38.418 38.481 3 0.0089707 9133 20230619_1881_Aki_TMTPro18x_K_F2 78.516 57.144 78980 46454 70769 77559 92677 89546 85166 91795 108310 71709 79807 61078 69365 56466 72151 64452 76800 59756 72840 42834 72926 75885 94286 89669 87011 93052 107780 73288 82644 62410 71257 58839 73526 64413 73319 56869 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28456000 167 4166 163 316 264 264 1 9606 Homo sapiens 0.04746106105665149 AAKPTTTPEVK Unmodified 1141.6343 0.63428844 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 1 7.5 0.5 1 1 39.189 39.215 3 0.016042 8949 20230619_1887_Aki_TMTPro18x_K_F7 66.492 43.114 39942 24673 46774 48848 63096 58637 48075 57083 56005 46040 73107 78835 57689 55190 70725 35957 67877 66590 36929 22802 47184 47431 63748 58497 49639 58117 57220 48110 73589 77680 60007 56684 71334 38282 64962 62927 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 958630000 168 630 164 317;318 265 265 1 9606 Homo sapiens 0.0691366633193411 AALAATGAASGGGGGGGGAGSR Unmodified 1629.7819 0.78190874 1977 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C yes yes 0 0 0 8 0 1 36.804 36.791 3 0.087142 8188 20230619_1888_Aki_TMTPro18x_K_F8 40.851 31.418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 169 1977 165 319 266 266 1 9606 Homo sapiens -0.0077909387202907965 AALADVLR Unmodified 827.4865 0.48650199 4548 Q9HC35;B5MBZ0;Q9HC35-2;B6EXY3;C1PHA1;J7MA22;C1PHA0;B3XZL9;B3XZM0;A9YLN7;I1X3U7;B6EXY4;B6EXY5 EML4;EML4-ALK variant 7;EML4-ALK;EML4-ALK variant 6;EML4/ALK fusion Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 0 7.5 0.5 1 1 51.334 51.411 2 0.008542 14217 20230619_1887_Aki_TMTPro18x_K_F7 104.37 32.227 210520 177110 190400 183110 168780 234630 166910 169090 232640 116140 101130 97085 89467 78277 162240 116900 116990 87669 194540 162210 194740 185170 177550 231790 170440 175870 227700 119920 109560 98862 95196 83367 160940 115380 112170 83686 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201000000 170 4548 166 320;321 267 267 1 9606 Homo sapiens 0.06585819588599406 AALADVLRR Unmodified 983.58761 0.58761301 4548 Q9HC35;B5MBZ0;Q9HC35-2;B6EXY3;C1PHA1;J7MA22;C1PHA0;B3XZL9;B3XZM0;A9YLN7;I1X3U7;B6EXY4;B6EXY5 EML4;EML4-ALK variant 7;EML4-ALK;EML4-ALK variant 6;EML4/ALK fusion Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 1 3 0 1 45.544 45.62 3 0.012819 12119 20230619_1882_Aki_TMTPro18x_K_F3 50.834 39.472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 171 4548 167 322 268 268 1 9606 Homo sapiens 0.09516271291306566 AALAHSEEVTASQVAATK Unmodified 1782.9112 0.91119158 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0 PLEC;PLEC1 Plectin yes no 0 0 0 5 0 1 46.57 46.647 4 0.015203 12342 20230619_1885_Aki_TMTPro18x_K_F5 60.489 41.414 64414 46278 64080 67767 59286 76411 77779 62345 80668 61831 74517 65637 71723 49741 65701 79175 68220 75872 59514 42560 65097 66749 62528 76237 77403 64712 81675 62676 76563 66004 72928 53436 67134 78855 65301 72070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54711000 172 3921 168 323 269 269 1 9606 Homo sapiens 0.05105242967420054 AALAPLPPLPAQFK Acetyl (Protein N-term) 1474.8548 0.85478632 851 A0A087WY55;Q9NP79 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes no 1 0 0 2.5 0.5 1 1 65.601 65.622 3 1.3837E-06 20795 20230619_1882_Aki_TMTPro18x_K_F3 94.191 74.43 108330 93330 91320 99783 98416 126250 107090 115630 127850 54286 51563 43767 51163 40385 87034 52340 53689 41640 100080 85497 94361 100620 102110 125370 108080 117190 125800 57965 56511 44881 53922 42411 85833 51925 51608 39708 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154550000 173 851 169 324;325 270;271 271 2 9606 Homo sapiens 0.136353116593682 AALCAVHVIR Unmodified 1108.6175 0.61753293 1171 O43747-2;O43747;B3KXW5;A0A140VJE7;Q8IY97;B4DS96;B4DDL1;H3BNR4;H3BUN9;H3BR36 AP1G1 AP-1 complex subunit gamma-1 yes no 0 0 0 3 0 1 42.542 42.608 3 5.9942E-10 10722 20230619_1882_Aki_TMTPro18x_K_F3 171.53 136.38 99791 98341 92876 87148 90694 97175 110000 108810 125360 106690 103550 102720 103410 98306 91009 115790 116590 107000 92339 89913 94861 89191 94895 97856 110250 110280 125930 107850 107250 104340 105070 102420 94308 115520 111240 101760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129750000 174 1171 170 326 272 272 1 9606 Homo sapiens 0.06756886964990372 AALDEAQGVGLDSTGYYDQEIYGGSDSR Unmodified 2936.2948 0.29480422 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5;B4DGZ4;A0A494C1M2;O75533-2 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 0 3 0 1 60.789 60.818 3 2.6129E-61 18757 20230619_1882_Aki_TMTPro18x_K_F3 252.39 245.89 17737 16198 18973 16403 17239 20460 20417 21404 18667 27452 25510 25494 23677 22734 27235 25773 26654 24537 16422 14829 19132 16620 18127 20408 20364 21949 19427 27338 25783 25866 24405 23691 27591 25790 25493 23326 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17463000 175 3309 171 327 273;274 273 2 9606 Homo sapiens -0.0958913948393274 AALDGTPGMIGYGMAK Unmodified 1551.7425 0.74253503 1243 A0A140VKA9;P09417;P09417-2 QDPR Dihydropteridine reductase yes no 0 0 0 4.5 3.5 1 1 58.424 58.448 3 3.1986E-08 17864 20230619_1880_Aki_TMTPro18x_K_F1 131.53 111.15 75204 57038 72731 80353 62233 86640 80134 77798 90522 89269 73176 74909 89607 70245 85791 95093 82132 77656 69489 52421 74002 79281 66106 86863 80080 80403 90992 89183 76647 76543 90714 73943 87153 94164 78587 73959 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 299950000 176 1243 172 328;329 275;276 275 2 9606 Homo sapiens -0.01126653471442296 AALDGTPGMIGYGMAK 2 Oxidation (M) 1583.7324 0.73236428 1243 A0A140VKA9;P09417;P09417-2 QDPR Dihydropteridine reductase yes no 0 2 0 7 0 1 49.876 49.957 3 0.017342 13559 20230619_1887_Aki_TMTPro18x_K_F7 58.32 37.939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 177 1243 172 330 277 277 786;787 1 9606 Homo sapiens -0.03615261196682695 AALDGTPGMIGYGMAK Oxidation (M) 1567.7374 0.73744965 1243 A0A140VKA9;P09417;P09417-2 QDPR Dihydropteridine reductase yes no 0 1 0 8 0 1 53.934 54.005 3 6.7814E-06 15274 20230619_1888_Aki_TMTPro18x_K_F8 105.19 96.371 68375 57386 59541 76573 60896 79046 72810 65961 76700 74446 71153 68915 76603 67142 76233 82985 72960 71874 63167 52688 61361 75738 63574 79406 72824 68558 77713 74641 73508 70176 78002 70136 77382 82505 69832 68388 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78250000 178 1243 172 331 278 278 786;787 1 9606 Homo sapiens -0.023709573340738643 AALDSLSLFTSLGLSEQK Acetyl (Protein N-term) 1921.0044 0.004423261 2024 Q53HS0;A8K3A8;P47897-2;P47897;B4DNN3;C9J165;A0A0U1RQT0;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;F2Z2V6;A0A0U1RQE9;A0A0U1RQC3;A0A0U1RRI9 QARS Glutamine--tRNA ligase yes no 1 0 0 7 0 1 68.924 68.943 3 2.9056E-06 21694 20230619_1887_Aki_TMTPro18x_K_F7 65.716 42.34 3436.7 2411.9 2740.7 2028.7 3601.8 2282.7 3069 2893.5 3297.7 4045.1 4308.8 2531 3887.5 3017.3 3880.3 4560.9 3575 2399 3169.6 2207.2 2848.2 2088.8 3647.1 2310.3 3133.2 2942.6 3390.5 3979.3 4343 2663 3977.5 3177.3 3932.6 4436.2 3415.3 2305.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3746400 179 2024 173 332 279 279 1 9606 Homo sapiens 0.0807612263001829 AALEACHK Unmodified 898.43309 0.43308621 3436 Q6IRT1;Q6FI45;P11766;Q5U043 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 yes no 0 0 0 5.5 0.5 1 1 35.175 35.247 3 0.00047269 7643 20230619_1885_Aki_TMTPro18x_K_F5 138.54 72.287 178560 79205 220090 216790 352910 378330 251260 315940 317070 157670 283090 314150 187820 211770 282400 98811 295210 247410 164960 73789 222070 209420 353240 368520 261400 322590 317240 172800 288230 308100 199590 215700 285150 110080 282000 233590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127340000 180 3436 174 333;334 280;281 280 2 9606 Homo sapiens -0.020193011855553777 AALEALGSCLNNK Unmodified 1359.6816 0.68164933 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;G3V5L0;G3V4W5;G3V540;G3V2E4;G3V2W0;G3V4X0;G3V4T0;G3V3Y8;G3V241 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 2 0 1 58.076 58.091 2 1.4027000000000002E-35 17902 20230619_1881_Aki_TMTPro18x_K_F2 270.52 185.91 49417 33372 41152 38596 39669 51594 51015 50073 48087 54105 61085 67081 59209 49949 59614 58975 62699 73565 45582 30623 42469 38738 41690 51131 50701 51358 49682 54829 62035 66906 60499 52582 60783 59936 60035 69678 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37834000 181 657 175 335 282 282 1 9606 Homo sapiens 0.01619577540645878 AALEAQNALHNMK Oxidation (M) 1425.7034 0.70344741 3017 Q92879-3;Q92879-2;Q92879-5;G5EA30;Q92879;Q92879-4;Q92879-6;E9PSH0;E9PKU1;E9PQK4 CELF1 CUGBP Elav-like family member 1 yes no 0 1 0 7.5 0.5 1 1 41.836 41.87 3 1.1334E-05 10026 20230619_1887_Aki_TMTPro18x_K_F7 119.52 105.17 93292 82453 86486 99427 117200 106760 108490 108310 117400 121570 135370 111960 133910 104240 102860 150040 126720 130370 86255 75610 88936 99114 118900 107510 110170 110890 119850 121850 137780 113990 135180 110230 106720 148790 121040 124020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110080000 182 3017 176 336;337 283 283 1777 1 9606 Homo sapiens 0.007623822891673626 AALEAQNALHNMK Unmodified 1409.7085 0.70853279 3017 Q92879-3;Q92879-2;Q92879-5;G5EA30;Q92879;Q92879-4;Q92879-6;E9PSH0;E9PKU1;E9PQK4 CELF1 CUGBP Elav-like family member 1 yes no 0 0 0 8 0 1 48.071 48.129 3 2.5412E-11 12773 20230619_1888_Aki_TMTPro18x_K_F8 159.36 122.12 330950 311840 268760 281750 244520 306270 326190 287670 388000 367760 399770 381450 412440 375330 343240 498740 402640 456900 305830 285190 277970 287600 258600 307590 325970 297430 392110 367950 409960 386740 417470 393710 354430 496380 385040 434210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 554250000 183 3017 176 338 284 284 1 9606 Homo sapiens 0.02006686151798931 AALEEFSR Unmodified 921.4556 0.45559579 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 0 3.5 0.5 1 1 46.268 46.329 2 0.0034787 12474 20230619_1882_Aki_TMTPro18x_K_F3 119.27 24.972 213650 159550 187440 199660 212510 241520 222510 209040 262910 262450 292700 307360 305410 266950 262100 308290 324940 355860 197240 146450 193050 198860 219190 240290 225010 217270 266760 263790 299520 308590 309330 278910 271010 311650 310510 337380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186730000 184 4016 177 339;340 285 285 1 9606 Homo sapiens -0.008273785162828062 AALEELQR Unmodified 928.49779 0.49779495 2625 B4DYP7;Q96CW5-2;Q96CW5;A0A0J9YX56;A0A0J9YX63 TUBGCP3 Gamma-tubulin complex component 3 yes no 0 0 0 3 0.816 1 1 1 44.166 44.232 2 0.062974 11510 20230619_1882_Aki_TMTPro18x_K_F3 69.198 12.15 108470 86969 103420 123310 95265 136750 129630 112490 206870 132160 146720 123340 141520 133260 115370 163050 176200 142430 100250 79917 105540 121630 100920 136590 130970 117190 203660 132500 152910 126110 143560 138630 121390 162090 167770 135620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 426100000 185 2625 178 341;342;343 286 286 1 9606 Homo sapiens 0.030685968920806772 AALEELVK Unmodified 871.50148 0.50148335 1641 P12081;P12081-4;E7ETE2;A0A6Q8PHA5;A0A6Q8PFF2;P12081-2;P12081-3;A0A6Q8PF47;A0A6Q8PHE3;B4DDD8;B4E1C5;B4DEA2;A0A6Q8PFG9;A0A6Q8PFN6;A0A6Q8PHQ0;D6RF05;A0A2R8YCI2 HARS Histidine--tRNA ligase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 55.737 55.807 2 0.0019235 16147 20230619_1885_Aki_TMTPro18x_K_F5 143.85 75.43 171350 140940 155740 182630 180380 211450 198650 196850 221400 199900 198770 221100 236740 190770 197840 244200 232180 232740 158330 129370 160070 181330 186040 211240 199900 202200 223380 202550 206810 222470 238540 200630 204010 243770 221820 221180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85060000 186 1641 179 344;345 287 287 1 9606 Homo sapiens 0.060592666659431416 AALEEVYPDLTPEETRR Unmodified 1987.9851 0.9850848 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 0 1 2.5 0.5 1 1 52.142 52.194 3 3.471E-24 15096 20230619_1882_Aki_TMTPro18x_K_F3 215.23 193.59 145590 128360 156810 153490 135420 148730 149630 153480 159790 187370 172170 156140 203110 165570 157290 204100 179980 194450 134770 117700 158010 152940 142690 150910 150470 157360 162910 186560 177270 160340 204080 172580 162270 203800 172090 184740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 296430000 187 2350 180 346;347 288;289 289 2 9606 Homo sapiens 0.03061166339080046 AALEQPCEGSLTRPK Unmodified 1655.8301 0.83010449 4131 Q6PUV4;D6RGY3;D6R960 CPLX2 Complexin-2 yes no 0 0 1 6.67 0.471 1 2 42.653 42.735 3;4 7.4207E-11 10343 20230619_1887_Aki_TMTPro18x_K_F7 163.2 136.66 187700 159150 174810 69083 40194 48160 66513 67338 69002 188750 198110 189380 209610 163100 182760 220190 221930 207890 173510 145050 175900 77484 53195 51088 66014 70697 75713 184030 197600 191340 212160 172190 188670 219550 211870 197640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 322350000 188 4131 181 348;349;350 290;291 291 2 9606 Homo sapiens 0.02842263723641736 AALETDENLLLCAPTGAGK Unmodified 1942.967 0.9669919 3312 O75643;A4FU77;A0A494C1A5;O75643-2 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 5.5 0.5 1 1 61.43 61.482 3 1.5224E-10 18534 20230619_1885_Aki_TMTPro18x_K_F5 136.39 124.25 239550 225910 256240 264180 260280 277650 308610 292130 344480 280530 262400 287540 292980 265620 293180 291170 291690 347370 221840 207050 259050 263920 271200 280140 309380 297180 345530 284460 274680 290760 298200 276100 298040 295340 279480 329130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 689280000 189 3312 182 351;352 292;293 292 2 9606 Homo sapiens 0.0332270809271904 AALEYLEDIDLK Unmodified 1391.7184 0.718412 4423 Q9BRX8-2;Q9BRX8 FAM213A Redox-regulatory protein FAM213A yes no 0 0 0 3.5 1.12 1 1 1 1 63.965 63.988 3 1.2014E-05 19749 20230619_1885_Aki_TMTPro18x_K_F5 133.07 101.84 42031 29964 34588 35476 31408 38812 44403 37280 41527 47154 48614 44651 49948 42139 44165 52147 55526 54769 38776 27495 35724 35427 33257 38954 43918 38472 42767 47044 49579 45378 50666 44092 45682 52363 53011 51994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 257400000 190 4423 183 353;354;355;356 294 294 1 9606 Homo sapiens 0.038221526381676085 AALGEPVRLER Acetyl (Protein N-term) 1251.6935 0.69353465 3005 G3V1D4;Q53FX5;Q9NUP9 LIN7C Protein lin-7 homolog C no no 1 0 1 2 0 1 45.433 45.515 2 1 NaN NaN 114320 101490 130600 114890 144490 160560 154560 128060 193260 119220 142620 140410 126210 108060 147630 123180 141040 117160 105890 93012 131440 115560 149260 158160 156350 132900 192380 121790 148020 140500 130370 113290 149230 123310 134840 111430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47717000 191 3005 184 357 0 9606 Homo sapiens 0.07775562346137121 AALGPLVTGLYDVQAFK Unmodified 1761.9665 0.96652161 2076 A8K5J1;P11172;B5LY71;B5LY69;E9PFD2;B5LY67;F2Z3P2;F2Z303;F8WDG4 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes no 0 0 0 3 0 1 64.93 64.962 3 1.5483999999999998E-19 20498 20230619_1882_Aki_TMTPro18x_K_F3 193.06 176.4 43224 39051 34024 37786 36065 39215 42026 40197 35712 45590 44097 46386 57548 49177 48997 56834 47345 49956 39923 35738 35383 38310 37454 39597 41841 41148 37136 45794 45463 47161 57891 51030 49926 56590 45333 47512 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150940000 192 2076 186 358 295 295 1 9606 Homo sapiens 0.1160170122582258 AALGPSSQNVTEYVVR Acetyl (Protein N-term) 1731.8792 0.87916317 3547 Q6IBK5;P35269;M0R0Z3;B4DDB5 GTF2F1 General transcription factor IIF subunit 1 yes no 1 0 0 5 0 1 58.819 58.873 2 2.0131E-14 17425 20230619_1885_Aki_TMTPro18x_K_F5 182.93 133.93 31898 24177 26941 31246 25619 29930 28765 33633 31072 29751 29198 27079 36791 26226 31784 38742 32672 33068 29444 22199 27786 30957 26825 30442 28912 33988 31460 30188 30366 27620 37036 27762 32496 38391 31254 31467 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35787000 193 3547 187 359 296 296 1 9606 Homo sapiens 0.04249875284290283 AALGVLESDLPSAVTLLK Acetyl (Protein N-term) 1838.0401 0.040080486 1859 H0YJQ1;A0A8V8TRJ3;Q8NEJ9-2;Q8NEJ9 NGDN Neuroguidin yes no 1 0 0 7 0 1 68.985 69.004 3 3.3971E-09 21683 20230619_1887_Aki_TMTPro18x_K_F7 74.786 52.588 11043 8319.1 10177 10285 8032.2 11960 9116.8 10046 9890.7 10030 12691 12713 11822 8298 11124 14298 10256 13309 10199 7635.2 10381 10247 8569.6 11915 9164.6 10395 10140 10216 12851 12644 12045 9026.1 11296 14204 9842.7 12641 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69147000 194 1859 188 360 297 297 1 9606 Homo sapiens 0.1545820487765468 AALLAELALLEPEALR Unmodified 1691.9822 0.98217168 3968 Q3KQV9;A0A087X226 UAP1L1 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 yes no 0 0 0 7 0 1 66.782 66.805 3 1.021E-05 20843 20230619_1887_Aki_TMTPro18x_K_F7 102.64 77.2 13575 11666 19206 18281 11604 17934 19041 16686 16489 21309 21149 20918 20862 16538 19033 22594 22570 24534 12599 10731 18930 17908 12867 18112 18698 17267 17143 21264 21468 21105 21207 17535 19602 22703 21574 23275 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7894100 195 3968 189 361 298 298 1 9606 Homo sapiens 0.16385987742864927 AALLDQALSNAR Unmodified 1241.6728 0.67279921 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-5 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 0 1 0 1 56.449 56.449 2 5.8654E-05 17035 20230619_1880_Aki_TMTPro18x_K_F1 128.01 99.81 42641 39940 43262 40732 40605 49778 49292 42737 53102 53856 46129 40161 58875 44982 49306 61409 52795 51834 39469 36563 43850 41215 42653 49498 49302 44448 53643 53438 48176 41596 59200 47136 50565 60874 50474 49337 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54963000 196 1566 190 362 299 299 1 9606 Homo sapiens 0.061629719664551885 AALLELWELR Unmodified 1212.6867 0.68665836 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 7.5 0.5 1 1 64.693 64.716 2 2.3314E-05 19834 20230619_1888_Aki_TMTPro18x_K_F8 158.76 114.55 79824 51991 62549 72221 58878 83801 74426 71078 106350 87282 86869 109100 103160 102430 105860 104530 95441 129840 73584 47806 65005 71387 62118 83503 75096 73950 105710 88082 90932 109460 105000 105950 107020 106440 91656 122930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64546000 197 1022;3868 191 363;364 300 300 1 9606 Homo sapiens 0.0888224946554601 AALLELWELRR Unmodified 1368.7878 0.78776939 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 3 0 1 61.782 61.812 3 4.796E-09 19154 20230619_1882_Aki_TMTPro18x_K_F3 178.46 123.06 101930 91142 98656 88375 65596 82210 91171 83845 117410 97407 79694 90813 114870 98956 137890 121760 95006 125030 94278 83414 99935 89501 71564 83683 91260 85945 116620 97591 85244 92772 117200 103030 137370 122220 91524 118610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87923000 198 1022;3868 192 365 301 301 1 9606 Homo sapiens 0.11812701168241801 AALLHGETR Unmodified 966.52468 0.52467841 3754 P78346;P78346-2;Q5VU10 RPP30 Ribonuclease P protein subunit p30 yes no 0 0 0 6 0.816 1 1 1 33.991 34.062 3 0.00048413 7178 20230619_1885_Aki_TMTPro18x_K_F5 113.22 83.41 51801 36318 51046 61134 54487 53660 55928 57713 73319 51612 58709 57888 60536 50724 50304 60179 71685 59891 47850 33464 52019 59559 56340 54905 56844 58539 73053 52716 60982 58265 61266 53058 52560 60281 68299 56931 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66766000 199 3754 193 366;367;368 302 302 1 9606 Homo sapiens 0.040077055032725184 AALLNFDEFAVSK Unmodified 1423.7347 0.73473076 793 A0A068F7M9;Q9Y613;B4DVN5;J3KTH7 FHOD1 FH1/FH2 domain-containing protein 1 yes no 0 0 0 8 0 1 63.344 63.366 3 0.0042509 19243 20230619_1888_Aki_TMTPro18x_K_F8 77.527 57.431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 200 793 194 369 303 303 1 9606 Homo sapiens 0.03981278594937976 AALLNQHYQVNFK Unmodified 1544.81 0.80996139 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 3.5 0.5 1 1 52.197 52.242 3 1.1233E-08 15001 20230619_1883_Aki_TMTPro18x_K_F4 167.2 141.22 1217900 967130 1061500 1267100 1114200 1321100 1186300 1223600 1482000 1458200 1382000 1573900 1733200 1473100 1378600 2053800 1827200 2118500 1124700 887970 1093400 1255200 1156700 1329200 1201200 1263200 1489900 1465000 1439100 1589600 1741500 1553700 1436600 2055800 1745900 2010400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1575999999.9999998 201 3402 195 370;371 304;305 305 2 9606 Homo sapiens 0.05934880846007218 AALLSGPPGVGK Unmodified 1065.6182 0.61824444 3546 P35251-2;P35251 RFC1 Replication factor C subunit 1 yes no 0 0 0 3 0 1 52.749 52.808 3 2.1375E-05 15405 20230619_1882_Aki_TMTPro18x_K_F3 122.69 89.57 110230 90314 104520 116960 101000 120480 115340 99142 128380 128150 125260 112360 128220 111410 113380 141000 124010 130090 101880 82902 106690 115940 105660 121060 115850 103600 129950 127530 128700 114820 130080 116520 116300 140520 118590 123650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51700000 202 3546 196 372 306 306 1 9606 Homo sapiens 0.08806004885695984 AALLTER Unmodified 772.4443 0.44430282 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 5.5 0.5 1 1 41.885 41.975 2 0.0056053 10315 20230619_1885_Aki_TMTPro18x_K_F5 139.54 98.242 532210 407860 457010 508280 576030 650740 541120 565760 732720 526040 544870 499270 610490 490360 523090 578660 613860 510330 491350 374340 472600 506810 588640 645180 553420 582620 727650 533530 570340 508110 616800 510850 538710 576170 585740 485810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 935710000 203 4746 197 373;374 307;308 307 2 9606 Homo sapiens 0.04897844180231914 AALMESQGQQQEER Oxidation (M) 1619.7209 0.72094797 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 1 0 1 0 1 33.466 33.466 3 1.5547E-09 7335 20230619_1880_Aki_TMTPro18x_K_F1 166.86 154.1 19508 13739 17108 21720 26761 29016 23548 26268 30657 20420 32820 32112 26871 26058 26203 24096 29898 26890 18004 12648 17752 21355 26960 28710 24148 26863 30859 21324 33302 31874 27603 26953 26848 24416 28550 25522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132680000 204 349;3906 198 375 309 309 205 1 9606 Homo sapiens -0.06412366966424088 AALMESQGQQQEER Unmodified 1603.726 0.72603334 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 2 0.816 1 1 1 38.98 39.02 3 7.2827E-58 9319 20230619_1881_Aki_TMTPro18x_K_F2 270.21 257.69 91296 66273 83376 90842 105590 127600 112500 100520 124540 117340 124960 115430 127520 110610 118700 122830 134370 124230 84298 60901 85764 90152 108220 125560 113350 105010 126210 117690 128240 117140 129680 114900 121740 123310 128340 118020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 439910000 205 349;3906 198 376;377;378 310;311 310 2 9606 Homo sapiens -0.05168063103815257 AALNELLK Unmodified 870.51747 0.51746776 1819 Q6PGP7;A0A8V8TMA8;A0A8V8TMB2;A0A8V8TLS3;A0A8V8TLT2;A0A8V8TNJ4;A0A8V8TLU2 TTC37 Tetratricopeptide repeat protein 37 yes no 0 0 0 8 0 1 56.672 56.729 2 0.0049663 16481 20230619_1888_Aki_TMTPro18x_K_F8 114.89 22.455 65003 49918 60521 65170 57243 74191 74791 72747 82863 56969 57673 53032 56994 48907 66167 65886 66009 61094 60049 45836 61854 64674 60285 74259 74619 74000 82862 58348 60329 53935 58646 51480 67110 65671 63125 58097 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135590000 206 1819 199 379 312 312 1 9606 Homo sapiens 0.0770297290284816 AALNGADIYAGCCTLK Unmodified 1696.7913 0.79127614 1144 C9IYN3;A8K894;V9GYK2;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9-4;Q8WVV9;A0A0S2Z610;Q8WVV9-3;Q8WVV9-2;H7BXH8 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 0 0 0 8 0 1 54.858 54.925 3 0.00072712 15676 20230619_1888_Aki_TMTPro18x_K_F8 82.259 69.427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 207 1144 200 380 313 313 1 9606 Homo sapiens -0.0292478490234771 AALQEEEQASK Unmodified 1202.5779 0.57789577 1621 B0AZS5;A0A6Q8PFA6;A0A6Q8PH57;O00139-2;A0A6Q8PGH7;A0A6Q8PG37;B4DM85;O00139-1;O00139-5;O00139;O00139-4;A0A6Q8PGG1 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 2 0 1 41.354 41.431 2 0.0012765 10490 20230619_1881_Aki_TMTPro18x_K_F2 97.456 78.185 11336 4990.3 11066 15313 15842 17364 13322 14003 16981 10853 17922 21763 19087 19446 15824 9921.3 21704 20787 10450 4661.6 11361 14611 16016 17304 13693 14463 17102 11485 18417 21496 19314 19625 16437 10756 20703 19632 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17945000 208 1621 201 381 314 314 1 9606 Homo sapiens -0.015290062953909 AALQEELQLCK Unmodified 1301.6649 0.66493664 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 5.5 0.5 1 1 55.38 55.451 3 2.6604E-12 16205 20230619_1886_Aki_TMTPro18x_K_F6 195.51 148.71 404030 345420 374480 372540 255460 331890 329500 348060 345060 494110 461740 440420 521160 409290 412970 599480 494650 492250 373470 316460 381060 373720 277200 339140 328830 358360 355990 489600 470610 448740 524660 433320 427390 592780 472470 468690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1811499999.9999998 209 3606 202 382;383 315;316 316 2 9606 Homo sapiens 0.026170766546783852 AALQELLSK Unmodified 971.56515 0.56514624 3727 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 0 1.5 0.5 1 1 61.212 61.218 3 1.8453E-05 18946 20230619_1880_Aki_TMTPro18x_K_F1 161.27 119.08 918500 778290 861360 892430 776110 930480 868010 922300 987350 1182600 981810 943080 1179200 955580 928260 1240100 1085800 1136600 849070 713460 878680 892680 816200 937900 874050 949430 1000400 1173700 1015800 968840 1185100 1000700 958780 1234900 1037700 1080400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4821600000 210 3727 203 384;385 317;318 317 2 9606 Homo sapiens 0.07822627103053037 AALQRPGIR Unmodified 980.58795 0.58794737 3965 Q32P41;G3V494;G3V5X1 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes no 0 0 1 4.5 0.5 1 1 32.947 33.016 3 0.0049817 6789 20230619_1885_Aki_TMTPro18x_K_F5 79.713 45.46 100810 66356 97093 98514 134210 124950 126870 123840 135480 90872 126230 123410 103650 93198 118670 95140 121290 105650 93078 61060 99489 97169 136080 124320 128580 125720 136960 94646 128980 122810 107250 97195 120420 96260 115920 100300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42043000 211 3965 204 386;387 319 319 1 9606 Homo sapiens 0.09687691011174593 AALQVPEHTAFGTR Unmodified 1496.7736 0.77357588 4373 Q96JQ0 DCHS1 Protocadherin-16 yes yes 0 0 0 8 0 1 44.47 44.489 3 3.2293E-05 11316 20230619_1888_Aki_TMTPro18x_K_F8 107.61 66.884 34091 28061 33954 36424 37141 41292 41509 36247 47915 37938 43070 42139 42350 32049 39523 40254 44427 42169 31524 25759 34571 36154 38449 41266 41780 37445 48219 38399 44380 42251 43090 33845 40513 40426 42445 40040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49942000 212 4373 205 388 320 320 1 9606 Homo sapiens 0.04506003949313708 AALRPLVK Unmodified 866.57017 0.57017204 199 D3YTB1;A0A024R2G7;F8W727;P62910;D3YTI8 RPL32 60S ribosomal protein L32 yes no 0 0 1 5.5 0.5 1 1 42.911 42.998 3 0.018811 10757 20230619_1886_Aki_TMTPro18x_K_F6 77.282 66.454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 213 199 206 389;390 321;322 322 2 9606 Homo sapiens 0.13154975756322074 AALRPLVKPK Unmodified 1091.7179 0.71789891 199 D3YTB1;A0A024R2G7;F8W727;P62910;D3YTI8 RPL32 60S ribosomal protein L32 yes no 0 0 2 7.5 0.5 1 1 42.331 42.37 4 0.00029903 10206 20230619_1887_Aki_TMTPro18x_K_F7 120.12 112.19 791780 632720 806540 738920 801930 810290 856890 795740 821490 750820 623770 491480 697250 443090 631900 621190 573720 315340 732140 580250 817500 738840 833890 813950 859740 812760 831380 753360 651770 509430 705110 468500 640330 604480 547710 303700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2812300000 214 199 207 391;392 323 323 1 9606 Homo sapiens 0.17570867290305614 AALSALESFLK Unmodified 1148.6441 0.64412484 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2.5 0.5 1 1 65.092 65.112 3 0.00011651 20564 20230619_1882_Aki_TMTPro18x_K_F3 118.4 82.403 28345 20716 28296 30038 23643 30151 31342 32579 34661 34679 26168 29392 37309 28421 27842 43862 36232 38304 26192 19049 28696 29566 25164 30515 31262 33165 34816 34772 27755 30056 37267 30179 29030 43465 34600 36432 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130600000 215 3758 208 393;394 324 324 1 9606 Homo sapiens 0.07574854337326542 AALSASEGEEVPQDK Unmodified 1529.7209 0.72093119 1627 O95831;O95831-3;A0A6Q8PFM5;A0A6Q8PG15;A0A6Q8PFE1;A0A7I2PK44;A0A6Q8PFA7;A0A6Q8PFS4;A0A6Q8PFQ8;A0A6Q8PFW2;O95831-4;Q5RZA0;A0A6Q8PF87 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 0 1.5 0.5 1 1 45.19 45.231 3 5.9264E-14 12401 20230619_1880_Aki_TMTPro18x_K_F1 174.39 129.85 114390 102530 110830 116810 116550 126140 138540 126810 159520 167170 169400 171430 201190 155440 143930 195600 195790 187180 105810 93968 113010 116960 121190 126910 139030 130610 161790 166920 174680 173320 201540 163060 150510 195290 186770 177900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 361070000 216 1627 209 395;396 325;326 325 2 9606 Homo sapiens -0.022740436948197384 AALSEEELEK Unmodified 1117.5503 0.55028404 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 1.5 0.5 1 1 48.239 48.274 2 8.3864E-10 13646 20230619_1880_Aki_TMTPro18x_K_F1 243.03 179.35 261120 205330 211510 236430 224730 276940 243660 250220 339680 328980 332190 353840 396800 317380 251220 490120 425980 426100 241010 188290 219360 236760 233430 276340 247550 259540 340400 329110 343920 357100 396090 337690 268990 485380 405890 405390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 274140000 217 1676;2901 210 397;398 327;328 327 2 9606 Homo sapiens -0.0037890955561579176 AALSLPAK Unmodified 769.46979 0.46978929 3905 Q14978-3;B2RAU8;A0A0A0MRM9;Q14978;Q14978-2;Q96J17 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 0 0 0 2 0 1 49.475 49.534 3 0.0027891 14204 20230619_1881_Aki_TMTPro18x_K_F2 100.45 45.902 250000 227210 225160 241610 250610 304840 250590 260460 358660 84818 79907 52853 65811 44357 126800 97451 92558 46572 231140 208100 231300 243710 258790 302400 255820 264440 347250 94723 94413 55145 70569 48841 125800 94326 88571 44942 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153300000 218 3905 211 399 329 329 1 9606 Homo sapiens 0.07583318702654651 AALSSFQK Unmodified 850.45487 0.45486751 3691 Q53HJ0;Q59EL2;P61201;P61201-2;B2R6N0;H0YKU5 COPS2 COP9 signalosome complex subunit 2 yes no 0 0 0 2 0 1 47.757 47.828 3 0.0031113 13449 20230619_1881_Aki_TMTPro18x_K_F2 97.093 64.623 68761 54630 62927 65923 80493 83426 77962 78161 98846 41297 42468 37020 39651 33077 54890 46154 47043 37307 63526 50116 64687 65882 82153 82916 79348 79220 97089 43693 46101 37713 41303 34935 55063 45707 45019 35564 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38776000 219 3691 212 400 330 330 1 9606 Homo sapiens 0.0236582683467077 AALSSQQQQQLALLLQQFQTLK Unmodified 2484.37 0.37002225 288 Q6Y7W6;Q6Y7W6-5;Q6Y7W6-4;A0A024R4A5;Q6Y7W6-3;I1E4Y6;A0A7I2V361;A0A7I2V3H0;A0A7I2V516;E7ESB6;A0A7I2V3H7;B4DZM1;B4DRT8;C9JHW1 GIGYF2;TNRC15 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 0 0 0 6.5 0.5 1 1 66.006 66.04 3 3.0772E-12 20777 20230619_1886_Aki_TMTPro18x_K_F6 131.09 115.32 10205 7685.7 8009.6 6294.1 9181.7 10433 9726.5 10899 11979 9816.2 12656 11905 10233 9572.6 11280 11875 13559 13487 9414.5 7029.9 8327 6538.7 9470.4 10251 9847.9 11064 12089 10043 12843 11920 10579 10070 11581 11984 12951 12793 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27537000 220 288 213 401;402 331 331 1 9606 Homo sapiens 0.18721204086477883 AALTGLLHR Unmodified 950.56615 0.56614929 3658 P55084-2;P55084;B4DY96;B5MD38;D6W539;C9JEY0;C9JE81 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 4 0.816 1 1 1 46.427 46.487 3 1.6595E-12 12340 20230619_1883_Aki_TMTPro18x_K_F4 229.44 160.26 123600 113040 124280 137870 157840 180900 179220 165410 195150 122490 122260 120530 117220 104420 151210 135310 136080 125810 114380 103650 126820 137740 161900 179270 179820 168920 194770 126170 128740 121980 121480 109840 152230 135010 130280 119630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 969920000 221 3658 214 403;404;405 332;333;334 333 3 9606 Homo sapiens 0.08888886262616325 AALTLTPSAVNK Unmodified 1184.6765 0.6764876 4441 Q9BUE6;Q9BUE6-2;Q5TBE9 ISCA1 Iron-sulfur cluster assembly 1 homolog, mitochondrial yes no 0 0 0 3 0 1 51.779 51.844 3 0.00013009 14987 20230619_1882_Aki_TMTPro18x_K_F3 89.403 69.1 109750 84333 101130 112710 109960 135470 119930 121800 144730 108460 110620 105180 118070 88458 118190 121110 115200 120040 101380 77457 103680 111750 113950 134880 121090 125010 144580 110300 115410 106430 120200 93588 120030 121110 110290 114010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54782000 222 4441 215 406 335 335 1 9606 Homo sapiens 0.09153641740317653 AALTTLFK Acetyl (Protein N-term) 905.52222 0.52221879 2598 Q96KP4;B4DV28;A0A024R382;Q96KP4-2;J3QKT2;J3QL02;A0A087WYZ1;J3KSV5;J3QRD0;J3QKQ0;J3QLU1;J3QR27;J3QQN6;J3QRA8;J3QRP4;J3KSS4 CNDP2 Cytosolic non-specific dipeptidase yes no 1 0 0 2 0.816 1 1 1 65.478 65.491 2 0.0022803 20673 20230619_1880_Aki_TMTPro18x_K_F1 57.281 57.281 94196 68834 80416 76763 61669 71456 87196 88578 112550 94845 86508 74910 85693 71662 84894 92267 101740 86756 86937 63121 82537 76871 66324 73066 87222 89457 112130 94937 89873 76884 87474 75141 87303 92061 97077 82514 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94041000 223 2598 216 407;408;409 336;337 336 2 9606 Homo sapiens 0.0656785704561571 AALVLEDGSVLR Acetyl (Protein N-term) 1283.7085 0.70851601 2980 F8VPD4;P27708;G1UI39;Q53SZ4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 1 0 0 2.5 0.5 1 1 64.419 64.439 2 1.7211E-31 20555 20230619_1881_Aki_TMTPro18x_K_F2 190.02 160.21 3231.2 1896 1992.7 2407.5 3029.8 3354.4 3999 3140.5 4537.4 3901.3 3464.7 5545.1 3281.6 4320 2979.9 4014.5 4509.1 6176.4 2973 1742.6 2146.8 2401 3094.2 3314.8 3986.5 3245.4 4548 3953.4 3611.5 5502.9 3353.7 4475.6 3126.2 4156.8 4311 5837.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 270060000 224 2980 217 410;411 338 338 1 9606 Homo sapiens 0.0780100942347417 AAMAVGGAGGSR Acetyl (Protein N-term) 1045.4975 0.49747738 3222 O14744;B2RDD7;O14744-5;G3V580;G3V2L6;C9JSX3;G3V2X6;G3V2F5;G3V507 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed;Protein arginine N-methyltransferase 5 yes no 1 0 0 3 0 1 38.778 38.832 2 0.0004506 9121 20230619_1882_Aki_TMTPro18x_K_F3 72.59 62.175 38717 29768 34165 39808 36795 40465 37690 38703 41244 44851 52398 51519 50565 43834 46220 45586 48831 52263 35752 27341 35156 39373 38047 40826 38079 39833 42269 45191 53146 51732 51455 45565 47217 46163 46719 49556 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27668000 225 3222 218 412 339 339 1 9606 Homo sapiens -0.023451460993783257 AAMDNSEIAGEK Oxidation (M) 1250.5449 0.54488108 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;Q16891-3;B4DT20;C9J406;H7C463;B4E2B5;Q05DN3 IMMT MICOS complex subunit MIC60 yes no 0 1 0 2 0 1 38.933 39 3 0.0013258 9375 20230619_1881_Aki_TMTPro18x_K_F2 80.522 71.568 59881 48616 56527 67123 84243 87721 85575 88098 98458 83546 82537 96986 93170 91885 79200 77298 109830 102570 55342 44658 58193 66510 85318 87136 86564 89823 98932 85118 85993 97588 94215 94156 82451 79349 104740 97177 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68868000 226 3954 219 413 340 340 2621 1 9606 Homo sapiens -0.070369564097291 AAMDNSEIAGEK Unmodified 1234.55 0.54996646 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;Q16891-3;B4DT20;C9J406;H7C463;B4E2B5;Q05DN3 IMMT MICOS complex subunit MIC60 yes no 0 0 0 2.5 0.5 1 1 43.678 43.755 2;3 4.9919E-05 11542 20230619_1881_Aki_TMTPro18x_K_F2 98.407 83.435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 227 3954 219 414;415 341;342 341 2 9606 Homo sapiens -0.057926525471202694 AAMEALVVEVTK Oxidation (M) 1275.6744 0.67443869 3811 Q08211;B3KU66;Q08211-2 DHX9 ATP-dependent RNA helicase A yes no 0 1 0 5 0 1 54.782 54.849 3 0.00044876 15797 20230619_1885_Aki_TMTPro18x_K_F5 92.925 72.085 36092 27350 40332 43772 38297 41403 35814 37552 48828 42062 42994 41379 46231 38216 37956 47228 41304 49343 33390 25176 40599 42798 39880 41944 36678 38762 48768 42269 44504 41946 46682 40015 38982 47404 39542 46814 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57135000 228 3811 220 416 343 343 2485 1 9606 Homo sapiens 0.04762844940182731 AAMEALVVEVTK Unmodified 1259.6795 0.67952407 3811 Q08211;B3KU66;Q08211-2 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 6 0 1 62.987 63.035 3 0.0012352 19494 20230619_1886_Aki_TMTPro18x_K_F6 85.845 63.647 76967 79416 75431 64596 68112 70733 92194 80315 86130 89645 89364 78979 92810 75156 100430 80979 81356 79276 71274 72556 76588 66665 71898 71374 91359 81646 88235 89758 91661 80545 94916 77990 100830 81264 78011 75323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1285600000 229 3811 220 417 344 344 1 9606 Homo sapiens 0.060071488028142994 AAMEPIVISAK Unmodified 1128.6213 0.62128091 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 7.5 0.5 1 1 54.715 54.781 3 0.012152 15639 20230619_1887_Aki_TMTPro18x_K_F7 53.237 24.494 60583 47387 59907 61845 57315 72554 65882 66411 72798 69848 61488 62472 76992 56456 62851 83154 73572 75358 55999 43510 60897 61403 60045 72380 66153 68351 73357 70191 64301 63582 77370 59887 64864 82629 70301 71652 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172650000 230 1292 221 418;419 345 345 1 9606 Homo sapiens 0.06211511948208681 AAMGPGISR Oxidation (M) 874.43309 0.43308621 4351 Q96G03;Q4W5D6;E9PD70;E7ENQ8 PGM2;FLJ10983 Phosphoglucomutase-2 yes no 0 1 0 6 0.816 1 1 1 31.416 31.486 2 0.030963 5903 20230619_1887_Aki_TMTPro18x_K_F7 68.787 42.094 58822 42357 51582 56445 75925 68395 69659 76580 84397 66694 81753 74626 76474 64413 63558 75875 94617 74439 54295 38912 53382 56004 76683 68465 71051 77366 84974 68190 83702 75109 77635 67381 66630 75953 90089 70792 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 39545000 231 4351 222 420;421;422 346;347 347 2745 2 9606 Homo sapiens -0.009153011855460136 AANAAENDFSVSQAEMSSR Oxidation (M) 1999.8541 0.85414698 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7;B4DNU2;A0A0G2JJB9 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 1 0 2 0 1 44.521 44.603 3 1.0802E-07 11947 20230619_1881_Aki_TMTPro18x_K_F2 114.06 111 26927 22623 26368 26063 33853 29793 27069 30457 30724 31417 34160 31278 33254 26490 33666 34868 35007 38408 24899 20740 26928 26099 34335 29884 27819 31080 31247 31687 34832 31616 33974 27943 34309 35096 33505 36430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102110000 232 1296 223 423 348 348 819 1 9606 Homo sapiens -0.105785923712574 AANAAENDFSVSQAEMSSR Unmodified 1983.8592 0.85923236 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7;B4DNU2;A0A0G2JJB9 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 2.5 0.5 1 1 48.395 48.47 3 1.4378999999999998E-19 13735 20230619_1881_Aki_TMTPro18x_K_F2 179.1 169.31 85989 69768 90660 102790 90144 103920 100950 101020 136220 122490 130060 126900 152250 121660 101810 135490 139970 153880 79543 64137 91781 101060 94042 104900 102250 104000 136510 122830 134600 128470 152260 126470 106710 136850 133650 145910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 366020000 233 1296 223 424;425 349;350 349 2 9606 Homo sapiens -0.0933428850864857 AANATTNPSQLLPLELVDK Acetyl (Protein N-term) 2036.079 0.078985188 910 A0A090N8Y5;Q9Y4Y9;B8ZZF8 LSM5 U6 snRNA-associated Sm-like protein LSm5 yes no 1 0 0 5.5 1.12 1 1 1 1 65.641 65.671 3 4.3727E-10 20430 20230619_1885_Aki_TMTPro18x_K_F5 88.56 68.721 435720 395240 434800 456990 358780 434310 444060 457170 528030 510680 510330 505270 528240 434860 535450 587410 526770 609990 403160 362260 440790 456300 381370 441440 445570 466940 532470 513060 525280 510970 538790 459110 544200 588900 504670 578820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2545600000 234 910 224 426;427;428;429 351;352;353 352 3 9606 Homo sapiens 0.10238885441390266 AANDAGYFNDEMAPIEVK Oxidation (M) 1969.8728 0.87275716 2292 B2RB23;P42765;A0A0B4J2A4;B3KNP8;K7EME0 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes no 0 1 0 3.5 0.5 1 1 55.472 55.498 3 1.7336E-06 16599 20230619_1882_Aki_TMTPro18x_K_F3 97.765 88.016 34106 30954 38745 48935 239110 48320 76829 47389 62630 34555 40188 39596 37323 74711 43825 47023 41619 50791 31594 28469 41750 47894 226390 49474 86278 48240 63885 35878 42202 41195 38795 74251 44351 47930 39906 48168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126630000 235 2292 225 430;431 354 354 1418 1 9606 Homo sapiens -0.07338430729419088 AANDAGYFNDEMAPIEVK Unmodified 1953.8778 0.87784254 2292 B2RB23;P42765;A0A0B4J2A4;B3KNP8;K7EME0 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes no 0 0 0 3 0 1 60.207 60.236 3 1.1379E-18 18485 20230619_1882_Aki_TMTPro18x_K_F3 176.94 155.41 33812 29583 36533 42867 41776 45702 45111 50303 50772 44769 43707 52682 53171 47379 50700 54538 54285 63289 31299 27182 37007 42222 43057 46087 45473 50911 51126 45782 45663 52931 53872 49427 51819 55168 51967 59986 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61427000 236 2292 225 432 355 355 1 9606 Homo sapiens -0.060941268668102566 AANFENHSGK Unmodified 1073.489 0.48902118 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9 VCL;HEL114 Vinculin yes no 0 0 0 5.5 0.5 1 1 34.369 34.436 3 0.00012339 7408 20230619_1886_Aki_TMTPro18x_K_F6 136.49 130.21 59104 30166 67560 70681 134830 127400 102740 133280 113990 65046 84446 110690 88644 80797 91006 43123 103160 96581 54588 27989 68945 68724 133670 124590 105810 133780 114190 70803 88423 109150 90505 82361 92889 47106 98536 91191 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91191000 237 51 226 433;434 356;357 357 2 9606 Homo sapiens -0.04478376744373236 AANFVHMDTAQK Oxidation (M) 1347.6241 0.62413446 3951 Q16566;B2R747 CAMK4 Calcium/calmodulin-dependent protein kinase type IV yes no 0 1 0 6.5 0.5 1 1 39.19 39.265 3 9.1076E-05 9210 20230619_1886_Aki_TMTPro18x_K_F6 108.68 95.918 179100 152380 186960 176410 130050 114030 143860 141640 159020 208180 259140 214760 221810 193870 193270 232860 243800 203430 165710 139700 188260 175500 139720 120850 144960 144690 165200 206910 259170 217190 226230 202650 200030 231640 232500 193680 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 157200000 238 3951 227 435;436 358;359;360 358 2618 3 9606 Homo sapiens -0.03577264664932045 AANFVHMDTAQK Unmodified 1331.6292 0.62921983 3951 Q16566;B2R747 CAMK4 Calcium/calmodulin-dependent protein kinase type IV yes no 0 0 0 7.5 0.5 1 1 44.41 44.461 3 1.4273E-05 11102 20230619_1887_Aki_TMTPro18x_K_F7 130.56 107.69 345730 284330 369910 339580 230520 258210 319030 303790 320920 401270 380600 372540 391300 330170 327610 404790 473370 352680 319880 260770 371440 337570 252740 268430 316910 309970 329550 399230 388060 378020 396110 345880 342670 402480 450680 335970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 268650000 239 3951 227 437;438 361;362 361 2 9606 Homo sapiens -0.02332960802323214 AANMLQQSGSK Unmodified 1133.5499 0.54990688 635 A0A024RAV2;P46063 RECQL ATP-dependent DNA helicase Q1 yes no 0 0 0 1 0 1 43.225 43.225 3 0.0027326 11524 20230619_1880_Aki_TMTPro18x_K_F1 62.408 46.518 63020 47696 63872 75361 85849 93591 90437 87565 117510 79240 94383 120750 99354 76789 80802 82381 110070 93371 58252 43897 65227 74015 87579 93074 91698 89671 117120 81838 98295 119090 100350 80963 84102 83322 104920 88629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36849000 240 635 228 439 363 363 1 9606 Homo sapiens -0.01152607756444013 AANPGCSLEDFVR Unmodified 1434.6562 0.65616287 2723 B9A6J2;Q15042;Q15042-3;D3DP75;A0A8J9AUI2;Q15042-4;A0A8I5KRH8 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes no 0 0 0 5 0 1 53.438 53.51 2 3.157E-07 15269 20230619_1885_Aki_TMTPro18x_K_F5 147.72 126.26 76945 63100 69102 76345 59419 58041 68347 71095 66547 108850 111120 110470 114510 100120 93259 124370 118160 130020 71090 57881 70729 75795 62667 60426 68418 72752 69840 107930 112030 111730 115770 104900 96758 124810 112890 123390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42293000 241 2723 229 440 364 364 1 9606 Homo sapiens -0.04377896981827689 AANPVDFLSK Unmodified 1060.5553 0.55530983 2518 B4DKU3;Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 0 0 0 4.5 3.5 1 1 57.843 57.843 2;3 0.00018546 17630 20230619_1880_Aki_TMTPro18x_K_F1 157.78 107.07 91592 72351 82080 93471 87144 103890 97134 101390 107380 103820 106560 100580 118090 87751 98481 119870 110910 112590 84601 66420 84329 92781 90472 104170 97693 103800 108800 104690 109820 101890 119140 92694 101290 119460 106010 107000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90502000 242 2518 230 441;442 365;366 365 2 9606 Homo sapiens 0.02745439097657254 AANQVEETLHTHLPQTPETNFR Unmodified 2532.2357 0.23571361 4082 Q5VZL5-2;Q5VZL5-4;Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes no 0 0 0 6 0 1 50.694 50.771 4 6.3695000000000006E-24 14253 20230619_1886_Aki_TMTPro18x_K_F6 191.44 178.21 21535 17443 19843 24792 18321 23446 19232 22196 27486 22291 23698 22341 27593 26324 26378 27750 24509 32253 19899 16028 20306 24401 19222 23768 19604 22765 27371 22545 24656 22831 27998 27096 26751 28111 23522 30558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73682000 243 4082 231 443 367 367 1 9606 Homo sapiens 0.030885185937677306 AANVGSMFQYWK Acetyl (Protein N-term) 1442.6653 0.66527099 1365 P39880-3;P39880-9;A0A2R8Y852;A0A2R8YDI1;Q13948-10;Q13948-2;Q13948-9;Q13948;A0A097ZMP4;A0A097ZMP6;B4DMN0;Q9BZV4;O14529 CUX1;CUX1-RETc;CUX1-RETa;CUX2 Homeobox protein cut-like 1;Protein CASP;Homeobox protein cut-like 2 no no 1 0 0 2 0 1 65.467 65.474 2 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7128300 244 1365 232 444 0 9606 Homo sapiens -0.03835503625441561 AAPAGGFQNIACLR Unmodified 1444.7245 0.7245172 649 A0A024RB62;Q9UBP6;H0YIH0 METTL1 tRNA (guanine-N(7)-)-methyltransferase yes no 0 0 0 3 0 1 52.208 52.274 2 1.8288E-22 15173 20230619_1882_Aki_TMTPro18x_K_F3 240.47 195.11 58121 52671 50476 50262 52793 62926 61496 62423 64706 71593 65345 66712 76773 58243 65940 79182 70229 73471 53721 48197 51956 51170 54936 62680 61606 64024 65825 71694 67525 67666 77430 61498 67554 78874 67176 69831 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45665000 245 649 233 445 368 368 1 9606 Homo sapiens 0.019943923887012716 AAPAPGLISVFSSSQELGAALAQLVAQR Acetyl (Protein N-term) 2793.5025 0.50249299 1052 A0A0K0K1K7;O95336;M0R261;M0R0U3 PGLS 6-phosphogluconolactonase yes no 1 0 0 5 0 1 71.787 71.832 3 0.0051673 22799 20230619_1885_Aki_TMTPro18x_K_F5 55.881 46.598 0 0 0 0 0 0 0 0 1003.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1003.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1801100 246 1052 234 446 369 369 1 9606 Homo sapiens 0.1774818403264362 AAPCEGQAFAVGVEK Acetyl (Protein N-term) 1574.7399 0.73989249 2733 C9J0I9;Q86WB0;Q86WB0-3;F8WBD7;F8WDK5;F8WF13;F8WAU5 ZC3HC1 Nuclear-interacting partner of ALK yes no 1 0 0 3 0 1 57.67 57.703 2 0.016312 17460 20230619_1882_Aki_TMTPro18x_K_F3 86.114 74.624 33886 26192 36150 31739 27119 41327 37891 38727 39193 42423 38501 40861 45948 36805 41640 43650 44171 52797 31340 24032 36389 31738 29250 40971 37637 39826 39854 42622 39884 41404 46439 38493 42571 44256 42298 50018 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69571000 247 2733 235 447 370 370 1 9606 Homo sapiens -0.02448785604792647 AAPCIYWLPLTDSQIVQK Unmodified 2102.087 0.087047453 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3;Q69YJ6;G3V3B0;Q9UKV3-3;Q9UKV3-2 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus yes no 0 0 0 3 0 1 64.146 64.178 3 2.6608E-06 20255 20230619_1882_Aki_TMTPro18x_K_F3 96.993 86.205 11568 12997 15104 15866 11755 16230 17081 15694 16918 15717 16874 13735 24062 14332 14176 24467 20410 21778 10749 11911 15011 15793 12628 16364 16910 16076 17241 15827 17598 14091 23823 15328 14990 24237 19477 20708 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185000000 248 2896 236 448 371 371 1 9606 Homo sapiens 0.08008741157118493 AAPDEDREPESAR Unmodified 1441.6433 0.64334957 4408 Q99856 ARID3A AT-rich interactive domain-containing protein 3A yes yes 0 0 1 1 0 1 28.675 28.675 3 5.2591E-06 5432 20230619_1880_Aki_TMTPro18x_K_F1 130.56 108.51 5906.9 2189.1 5728.3 4872.2 2790.3 3431 1639 3004.8 2138.9 4058.7 5636.4 6498.7 6480.2 3572.3 6080.4 3704.4 5703.1 5399.3 5441.9 2033.8 5780.5 4678.6 3105.8 3564.7 1751.2 3129.2 2297 4112.6 5661.1 6380.6 6551.2 3797.8 6155.3 3823.1 5458.3 5111.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5155500 249 4408 237 449 372 372 1 9606 Homo sapiens -0.05980636840331499 AAPEASGTPSSDAVSR Unmodified 1501.7009 0.70086445 373 A0A024R611;P31146;Q59G88 CORO1A Coronin;Coronin-1A yes no 0 0 0 2.5 0.5 1 1 34.829 34.888 3 1.9059E-15 7617 20230619_1881_Aki_TMTPro18x_K_F2 192.32 159.11 31167 19757 29888 32701 36061 36552 34426 33492 40461 39484 46102 44046 47901 35432 38053 38919 54448 46519 28769 18208 30573 31988 36909 36590 34996 34592 41103 39723 47086 44213 48339 37053 39772 39478 51882 44133 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55030000 250 373 238 450;451 373;374 373 2 9606 Homo sapiens -0.029917946347495672 AAPEEPQQRPPEAVAAAPAGTTSSR Unmodified 2488.2306 0.23062824 314 A0A0A6YYC7;A0A024R4Z4;A0A024R4Z1;Q96JP5-2;Q96JP5 ZFP91-CNTF;hCG_2042749;ZFP91 E3 ubiquitin-protein ligase ZFP91 yes no 0 0 1 4 0 1 38.045 38.088 3 1.0778E-13 8772 20230619_1883_Aki_TMTPro18x_K_F4 137.9 123.02 13387 10747 14039 14961 13898 13628 17709 15148 15391 13789 17544 14731 16638 12293 15586 19354 18698 17584 12382 9873.9 14211 14745 14523 13919 17560 15346 15884 14036 17843 14857 16950 13139 16060 19223 17853 16724 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54135000 251 314 239 452 375 375 1 9606 Homo sapiens 0.046042147311254666 AAPEMVSLLK Unmodified 1057.5842 0.58416712 446 Q92947;A0A2L2DH10;A0A2L2DH39;A0A2L2DH25;A0A2L2DH19;A0A2H4G235;A0A2H4G1S8;A0A2H4G0V0;A0A2H4FWZ7;A0A2H4FX81;A0A2H4FX57;A0A2H4FX55;B4DK85;A0A024R7F9;B4DUY0;A0A1L3A5U7;A0A2H4FX70;A0A2H4G245;A0A2L2DH21;A0A2H4FX52;Q92947-2;K7ESA6;K7EQ99 GCDH Glutaryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 4.5 3.5 1 1 59.567 59.609 2;3 0.00016558 18327 20230619_1880_Aki_TMTPro18x_K_F1 112.75 36.606 46182 39669 44710 48143 50694 62195 49542 47659 58571 61487 65969 79784 72867 66996 73724 77279 77971 106210 42705 36383 45657 48095 52217 61481 50306 50074 59484 61966 67748 79691 74226 70089 75215 79089 74757 100470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17452000 252 446 240 453;454 376;377 376 2 9606 Homo sapiens 0.057678404024500196 AAPFSLEYR Unmodified 1052.5291 0.52909508 3922 Q15181;V9HWB5;Q5SQT6 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 0 0 7.5 0.5 1 1 51.615 51.691 2 5.4443E-05 14317 20230619_1887_Aki_TMTPro18x_K_F7 163.04 136.96 1492900 1301000 1323100 1355900 1263300 1422500 1333000 1343000 1360000 1118300 1063600 934340 1020800 904210 1260700 1215100 1168200 887410 1379700 1191500 1357300 1366500 1319300 1432100 1341300 1371700 1371800 1137100 1103200 956920 1055000 949620 1272300 1198100 1116700 847370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2920599999.9999995 253 3922 241 455;456 378;379 378 2 9606 Homo sapiens 0.004931699261760514 AAPGAEFAPNK Unmodified 1071.5349 0.53490874 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7I2V4K9 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 6.5 0.5 1 1 44.965 45.052 3 7.4044E-05 11319 20230619_1887_Aki_TMTPro18x_K_F7 123.86 92.786 800590 675810 773340 813430 885810 1011900 938350 853520 1102900 795630 876660 764640 990510 775350 783980 1011600 1038400 841420 740220 619820 789900 812720 913090 1004400 947760 881550 1104300 807190 914140 779100 997420 812020 816040 1002600 989740 801710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2887400000 254 1112 242 457;458 380;381 381 2 9606 Homo sapiens 0.0020026843783398363 AAPGEFR Unmodified 746.37114 0.37113788 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;A0A3B3ISX1;A0A3B3ITG9;A0A7P0TA14;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 4 0.816 1 1 1 35.605 35.67 2 0.064992 7800 20230619_1883_Aki_TMTPro18x_K_F4 79.454 17.456 600560 475630 574490 574800 604360 566110 617060 630570 684190 797310 989490 913530 920930 748810 763160 808490 1230800 1021800 555010 436340 586050 572470 625010 574970 623940 644200 705530 800000 997060 916640 934700 781470 804720 823300 1171600 969060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 343070000 255 1718;4020 243 459;460;461 382 382 1 9606 Homo sapiens -0.01219284542389687 AAPGPALCLFDVDGTLTAPR Acetyl (Protein N-term) 2083.0408 0.040825542 1098 O15305;A0A291FGD1;A0A0S2Z4J6;B2R6D4;H3BRM0;A0A804HKA7;H3BR08;H3BM92;B7Z3M6;H3BNY9;H3BT06;H3BV34;O15305-2 PMM2 Phosphomannomutase 2;Phosphomannomutase yes no 1 0 0 5.5 0.5 1 1 66.326 66.369 2 1.248E-16 20718 20230619_1885_Aki_TMTPro18x_K_F5 214.23 197.98 992.18 1395.9 1489.5 1620 816.46 1517.7 1459.1 1292.4 718.61 0 1685 1520.4 1554.6 1787.1 2154.4 1894 1587.2 1834.4 925.37 1277.9 1463.3 1616.3 919.93 1535.7 1412.7 1304.1 805.76 0 1678.4 1489.6 1621.4 1836.5 2147.6 1899.4 1525.8 1742.1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 69092000 256 1098 244 462;463 383 383 1 9606 Homo sapiens 0.042626762550298736 AAPGYHMAK Oxidation (M) 960.44874 0.44873627 3432;1055;2254 B4DRW6;B2RB32;A0A0M4FEM1;P11217;P11217-2;B4DRQ4;Q59GM9;P11216;B4DSD8;H0Y4Z6;E9PK47;B2R825;P06737-2;P06737 PYGM;PYGB;PYGL Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, muscle form;Glycogen phosphorylase, brain form;Glycogen phosphorylase, liver form no no 0 1 0 5.33 3.09 1 1 1 31.732 31.781 3 0.002398 6281 20230619_1888_Aki_TMTPro18x_K_F8 83.265 62.935 73904 44321 74583 72953 109550 102780 89542 99716 114930 74791 89673 81064 59445 70463 98316 64836 102690 67983 68228 40855 76200 71683 110380 101590 92226 101350 114500 77183 91874 81675 63642 72643 99331 65550 97966 64665 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84184000 257 1055;3432;2254 245 464;465;466 384;385 385 613 2 9606 Homo sapiens -0.03307014668496322 AAPMTPAARPEDYEAALNAALADVPELAR Acetyl (Protein N-term) 3035.5022 0.50223499 3792 Q04446 GBE1 1,4-alpha-glucan-branching enzyme yes yes 1 0 1 5 0 1 65.941 65.984 3 1.9339E-09 20579 20230619_1885_Aki_TMTPro18x_K_F5 47.757 40.564 1368.9 1423.5 1241.5 1677.2 1673.4 1175.2 2545.9 1718.6 1443 930.91 1474.9 1612.5 1198.4 2460 2517 1179.7 2127 1876.2 1267 1304.3 1281.2 1666.7 1718.7 1241 2479.1 1700.9 1530.2 1005.2 1504.5 1634.9 1304.2 2435.9 2507.1 1250.3 2037.1 1775.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26561000 258 3792 247 467 386 386 1 9606 Homo sapiens 0.0659039625047626 AAPPGEYFSVGSQVSCR Acetyl (Protein N-term) 1852.8414 0.84139745 3164 K7ELG9;Q3MHD2;Q3MHD2-2;B4DUG4 LSM12 Protein LSM12 homolog yes no 1 0 0 4.5 0.5 1 1 57.728 57.759 2 4.4488E-13 16977 20230619_1885_Aki_TMTPro18x_K_F5 154.36 154.36 27422 21158 28015 22119 21130 22213 23264 30365 29590 29923 25925 29740 34469 29222 36302 30197 28392 34910 25352 19387 28264 22298 22550 22653 23564 30417 29665 30248 27185 30166 34985 30224 36412 30615 27287 33084 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110800000 259 3164 248 468;469 387 387 1 9606 Homo sapiens -0.05090958972846238 AAPPQIPDTR Unmodified 1064.5615 0.56145784 4540 Q9HAF1-2;Q9HAF1;Q9HAF1-4;Q9HAF1-3 MEAF6 Chromatin modification-related protein MEAF6 yes no 0 0 0 5 0 1 40.75 40.838 2 0.00018315 9870 20230619_1885_Aki_TMTPro18x_K_F5 122.33 77.98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 260 4540 249 470 388 388 1 9606 Homo sapiens 0.031759573291765264 AAPQDVHVR Acetyl (Protein N-term) 1033.5305 0.53049207 3827 Q12981;Q12981-1;Q12981-2;Q12981-3 BNIP1 Vesicle transport protein SEC20 yes no 1 0 0 1 0 1 31.354 31.354 2 0.001105 6522 20230619_1880_Aki_TMTPro18x_K_F1 97.093 80.317 11440 5424.6 14588 14333 20662 23420 17927 18526 17639 9688.2 13440 21815 14889 16336 16380 10602 24068 24917 10574 5047.6 14649 13840 20899 22855 18224 19028 17795 10646 14117 21378 15259 16725 17020 11566 22960 23511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23557000 261 3827 250 471 389 389 1 9606 Homo sapiens 0.01506804014957197 AAPQSPSVPK Unmodified 980.5291 0.52909508 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 7.5 0.5 1 1 40.128 40.155 3 0.00069684 9518 20230619_1888_Aki_TMTPro18x_K_F8 96.171 58.98 57630 36025 62090 63807 86833 89325 73224 79471 87848 68410 84907 83335 78503 67664 77457 57156 96841 81938 53245 33235 63076 62439 87826 88124 75084 81539 88486 70216 86965 83365 80298 69786 79727 59068 92366 77617 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98378000 262 81 251 472;473 390 390 1 9606 Homo sapiens 0.03805169926192775 AAPSEVAAIAPGEGDGGGGGFGSWLDGR Acetyl (Protein N-term) 2599.1939 0.19390838 4196 Q86WV7;Q96MW1;Q96MW1-2 CCDC43 Coiled-coil domain-containing protein 43 yes no 1 0 0 2.5 0.5 1 1 65.15 65.17 3 1.3213E-20 20609 20230619_1882_Aki_TMTPro18x_K_F3 116.08 110.98 3989.4 3459.4 5117.2 4556.6 3982 4475.8 5401.7 4772.4 5097.2 4519.1 4657.6 4158.9 6090.6 4274.5 3780.5 4398.8 4778.3 5206.9 3698.9 3175.4 5084.7 4512.2 4259.2 4538.2 5355.2 4850.5 5191.6 4570.9 4856.7 4244.2 6054.9 4418.6 3943.3 4461.9 4565.2 4935.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29750000 263 4196 252 474;475 391 391 1 9606 Homo sapiens -0.04172081885508305 AAPSGGVNCEEFAEFQELLK Acetyl (Protein N-term) 2237.031 0.031048717 3980 Q4VC31 CCDC58 Coiled-coil domain-containing protein 58 yes yes 1 0 0 2.5 1.12 1 1 1 1 66.288 66.302 3 0.023267 21056 20230619_1882_Aki_TMTPro18x_K_F3 42.118 32.954 89366 74346 83138 97686 102700 110480 105710 105000 104200 105140 103690 96342 114460 96228 107960 126070 104710 116950 82595 68251 85358 96871 105170 110610 106370 107650 106280 105980 106860 98287 116150 100850 109820 125650 100310 111130 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 175060000 264 3980 253 476;477;478;479 392;393 393 2 9606 Homo sapiens -0.03798556541005382 AAPVDLELK Acetyl (Protein N-term) 996.54916 0.54916182 3289 O60925;E5RGS4;D6RGG5 PFDN1 Prefoldin subunit 1 yes no 1 0 0 2.5 0.5 1 1 61.113 61.133 2 0.0035509 18875 20230619_1882_Aki_TMTPro18x_K_F3 70.69 70.69 266830 213470 247520 256290 221760 268230 265220 263320 287430 308970 315000 322760 322510 283100 288580 362770 352920 378470 246550 195820 252740 255520 233780 270190 265680 270590 292780 310170 322260 325740 327420 297530 298010 363910 337230 359210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 354980000 265 3289 254 480;481 394;395 395 2 9606 Homo sapiens 0.05074920866127286 AAPVDLELKK Acetyl (Protein N-term) 1124.6441 0.64412484 3289 O60925;E5RGS4;D6RGG5 PFDN1 Prefoldin subunit 1 yes no 1 0 1 5.5 0.5 1 1 54.699 54.771 2 0.0009645 15747 20230619_1885_Aki_TMTPro18x_K_F5 50.805 16.993 118170 103850 110110 111870 110530 132430 123750 118580 120070 145310 150790 136490 144120 116530 135720 150810 139910 133690 109260 95137 112560 112630 115200 132050 123940 122810 123850 145100 152890 138330 146840 122690 138470 150010 133780 127180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198960000 266 3289 255 482;483 396 396 1 9606 Homo sapiens 0.08678854337335906 AAPVVAPPGVVVSR Acetyl (Protein N-term) 1359.7874 0.78743503 1528 Q13144;A0A3B3IUB1;A0A3B3IRP4;A0A3B3ISX3;A0A3B3ISM8;A0A3B3IUF2;A0A3B3IS56;C9JRD9;A0A3B3IT53 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes no 1 0 0 7 0 1 56.007 56.065 2 0.0016182 16169 20230619_1887_Aki_TMTPro18x_K_F7 53.6 53.6 85393 94638 77617 78609 126940 159900 99271 85688 259160 90088 98441 106370 108350 87306 89849 98418 95715 118160 79076 86458 80265 81782 127740 153840 106390 92779 248010 91806 108950 106570 109440 91320 92068 99801 91678 111940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57713000 267 1528 256 484 397 397 1 9606 Homo sapiens 0.12193281448412563 AAQALALLR Acetyl (Protein N-term) 967.58147 0.581465 2051 A8K4T6;Q16401-2;Q16401;F2Z3J2 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes no 1 0 0 4.5 3.5 1 1 64.015 64.025 2 8.7673E-07 20115 20230619_1880_Aki_TMTPro18x_K_F1 94.006 75.231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 268 2051 257 485;486 398;399 398 2 9606 Homo sapiens 0.09637753059814713 AAQDFFSTCR Unmodified 1201.5186 0.51860675 1273 H0Y5R6;A0A494C0S8;A0A1B0GVN9;A0A494C0Q8;P06132;A0A494C1D8;Q5T446;A0A494BZY8;A0A1B0GVZ4;A0A494C1T3;A0A494C007;A0A494C085;B4DEM5;A0A494C0P4;B4DHV6 UROD Uroporphyrinogen decarboxylase yes no 0 0 0 7.5 0.5 1 1 48.969 49.045 2 2.5422E-05 13133 20230619_1888_Aki_TMTPro18x_K_F8 157.66 146.86 85999 73344 87507 79826 69478 79455 93814 86851 87218 97679 96112 93748 114820 89612 87929 131570 122680 104750 79554 67202 88459 80148 74223 80568 93004 88523 89643 97989 98984 95301 115300 94791 92038 129910 116920 99841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 297960000 269 1273 258 487;488 400 400 1 9606 Homo sapiens -0.07409180790546088 AAQDRDQIYR Unmodified 1234.6054 0.60544792 2322 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995-3;P62995;H7C2L4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta yes no 0 0 1 3.5 1.12 1 1 1 1 30.453 30.528 3 0.0001671 5765 20230619_1882_Aki_TMTPro18x_K_F3 125.74 82.228 158880 114250 160220 161340 219410 203660 192450 194270 221660 179840 213780 215010 228930 183470 194020 202720 241370 198660 146820 105030 163500 159590 222210 202560 196510 198710 223760 183660 220360 215650 231470 191320 200540 203190 230190 188890 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3401699999.9999995 270 2322 259 489;490;491;492 401;402;403;404 402 4 9606 Homo sapiens -0.0024705824448574276 AAQEEYVK Unmodified 936.45526 0.45526144 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;A0A0M4FNU3;H3BR68 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 3 0.816 1 1 1 40.049 40.105 2 0.0027577 9814 20230619_1881_Aki_TMTPro18x_K_F2 135 90.864 425780 206490 486270 520740 808160 923770 543840 786170 644060 519230 843750 1213400 469560 806840 396040 335710 929270 901980 393170 191920 493960 504540 807150 899410 567560 804790 657530 559970 842050 1184400 490850 819100 433050 377110 883770 850810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1006699999.9999999 271 3378 260 493;494;495 405;406 405 2 9606 Homo sapiens -0.015507982361327777 AAQELQEGQR Unmodified 1128.5523 0.55234972 3548 P35520;P35520-2;B7Z2D6;B7Z6W5;Q9NTF0;H7C2H4 CBS;DKFZp727E011 Cystathionine beta-synthase yes no 0 0 0 1.5 0.5 1 1 33.788 33.816 2 5.9683E-07 7184 20230619_1881_Aki_TMTPro18x_K_F2 185.6 156.87 48416 27712 60367 56887 70193 76773 58178 72516 61408 53816 98413 118140 78139 83848 94368 35098 103640 116770 44776 25635 60447 55271 71770 75962 59551 73857 63750 57319 98507 115700 81261 85043 95852 40824 99165 109990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58432000 272 3548 261 496;497 407;408 408 2 9606 Homo sapiens -0.006784360271467449 AAQEQVLNASR Unmodified 1185.6102 0.61019895 4403 Q99543-2;Q99543;Q08AR5 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 37.596 37.665 2 2.0679E-08 8603 20230619_1883_Aki_TMTPro18x_K_F4 171.92 144.62 89751 60492 74931 83066 91763 94632 88740 90142 127720 101210 105190 103610 126070 88553 83220 124980 140900 126950 82786 55608 77641 82162 93960 94713 90829 92685 126970 101830 109820 104620 125910 93863 88780 124970 134160 120610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 103140000 273 4403 262 498;499 409;410 409 2 9606 Homo sapiens 0.02481825898257739 AAQGEPQVQFK Acetyl (Protein N-term) 1243.6197 0.619701 2668 B5MDF5;P62826;A0A087X0W0 RAN GTP-binding nuclear protein Ran yes no 1 0 0 3 0.816 1 1 1 51.266 51.314 2 4.3478E-06 14523 20230619_1883_Aki_TMTPro18x_K_F4 130.27 109.51 538330 398850 462680 469020 454450 536700 499600 500810 576320 572360 592040 632680 683470 512960 554220 682280 663570 642920 496910 365900 476230 468890 474460 536740 503630 516020 583580 576430 610870 635500 688120 542240 572570 680330 633700 611140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6985299999.999999 274 2668 263 500;501;502 411;412 412 2 9606 Homo sapiens 0.007635941838088911 AAQIPESDQIK Acetyl (Protein N-term) 1240.6299 0.62993134 378 A0A024R648;Q9Y5J7;A0A1W2PRH9;A0A1W2PQS5;G3V502;G3V2F3 TIMM9 Mitochondrial import inner membrane translocase subunit Tim9 yes no 1 0 0 2 0 1 51.15 51.195 2 0.00029465 14961 20230619_1881_Aki_TMTPro18x_K_F2 107.69 44.976 111460 109480 134380 137600 122010 142850 136540 135760 154130 143740 145190 141770 167060 124530 139360 165850 171560 175340 103370 100400 134440 136720 128110 143870 137420 139420 155680 144800 150300 143490 168410 131320 144120 166440 163860 166420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 364180000 275 378 264 503 413 413 1 9606 Homo sapiens 0.01924157118378389 AAQLAIR Unmodified 741.44972 0.44972255 199 D3YTB1;A0A024R2G7;F8W727;P62910 RPL32 60S ribosomal protein L32 yes no 0 0 0 3.5 2.69 1 1 1 1 39.68 39.709 2 0.0077204 9925 20230619_1880_Aki_TMTPro18x_K_F1 122.98 33.076 1521600 1303300 1306600 1291200 2026700 2395400 1735200 1854200 2683900 357900 310340 277780 322230 258480 760630 407510 514370 248810 1405700 1193200 1356100 1319800 2044100 2325600 1793500 1890400 2578600 444520 431200 286670 350400 275020 750070 399410 492690 238970 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 952170000 276 199 265 504;505;506;507 414;415;416 414 3 9606 Homo sapiens 0.06865567762702085 AAQLGFK Unmodified 733.41227 0.41227441 425 B4DFL1;E9PEX6;B4DMK9;A0A024R713;P09622;P09622-3;F8WDM5;F2Z2E3 DLD Dihydrolipoyl dehydrogenase;Dihydrolipoyl dehydrogenase, mitochondrial yes no 0 0 0 1.5 0.5 1 1 47.793 47.828 2 0.0073036 13417 20230619_1881_Aki_TMTPro18x_K_F2 126.24 45.866 665970 521890 605010 757460 840870 707180 906030 878180 831570 727360 804540 595320 769160 551520 624530 784870 811340 586020 615180 479750 624020 744710 854440 723140 907130 881360 849980 739020 823690 610080 778730 582980 648730 773410 772920 559530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 352320000 277 425 266 508;509 417 417 1 9606 Homo sapiens 0.034904764970860924 AAQLQEALLHCGR Unmodified 1465.746 0.74598093 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A0U1RQJ2 DST Dystonin yes no 0 0 0 1 0 1 49.47 49.47 3 0.073212 14132 20230619_1880_Aki_TMTPro18x_K_F1 49.62 28.75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 278 1693 267 510 418 418 1 9606 Homo sapiens 0.031737774174189326 AAQMHSGYQR Oxidation (M) 1163.5142 0.51419008 1111 A0A0S2Z4Z0;Q96PK6;B4DNG4 RBM14 RNA-binding protein 14 yes no 0 1 0 6.8 1.17 1 1 1 2 23.486 23.548 3 0.00039562 3799 20230619_1886_Aki_TMTPro18x_K_F6 101.3 71.128 68380 46941 86041 91769 125860 101910 105430 117200 101210 79418 113630 123590 91277 93286 109320 56745 125590 102550 63300 43338 86527 89068 126650 102640 107400 117650 103750 83445 115140 122330 94836 95256 111440 60291 119850 97002 4 3 4 4 4 4 4 4 4 3 4 4 4 4 4 3 4 4 50365000 279 1111 268 511;512;513;514;515 419;420;421;422 420 683 4 9606 Homo sapiens -0.061026452134683495 AAQMHSGYQR Unmodified 1147.5193 0.51927545 1111 A0A0S2Z4Z0;Q96PK6;B4DNG4 RBM14 RNA-binding protein 14 yes no 0 0 0 7 0.816 1 1 1 26.029 26.083 3 4.5857E-14 3717 20230619_1887_Aki_TMTPro18x_K_F7 191.4 144.41 100330 66893 120980 117800 173720 181480 147370 164340 162470 108290 152480 161280 160600 118940 154980 83044 187070 165170 92825 61688 121950 115540 175430 178190 150620 167490 164080 114120 157350 159800 163290 122360 159030 88864 178520 156090 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 159520000 280 1111 268 516;517;518 423;424;425 424 3 9606 Homo sapiens -0.048583413508595186 AAQNSGEAEYIEK Unmodified 1408.647 0.64703797 3015 G3XAI2;P07942;A0A7I2V4J9;Q8TAS6 LAMB1 Laminin subunit beta-1 yes no 0 0 0 2.5 0.5 1 1 43.596 43.672 3 8.5625E-08 11506 20230619_1881_Aki_TMTPro18x_K_F2 148.62 126.04 61187 57498 60783 65188 76333 75704 70335 70643 96364 90489 84446 85480 97571 95101 85173 104790 99352 86666 56627 52685 62028 65351 77873 75681 72058 73034 96263 90290 87775 87343 98679 98216 87713 104100 94834 82554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158220000 281 3015 269 519;520 426 426 1 9606 Homo sapiens -0.040939670664556616 AAQPPAQPCQLCGR Unmodified 1552.7239 0.72386527 3118 M0QXZ5;I6L9C8;Q96B54 ZNF428 Zinc finger protein 428 yes no 0 0 0 8 0 1 38.736 38.723 3 4.4357E-13 8966 20230619_1888_Aki_TMTPro18x_K_F8 112.73 107.57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 282 3118 270 521 427 427 1 9606 Homo sapiens -0.030387703226324447 AAQQAASSSGQGQQAQTPTGK Unmodified 2000.9512 0.95115891 1563 P48729-2;P48729;U3KPX3;A0A590UJ43;V9HW00;B4DER9;B4E1D9;H0Y9X2;U3KQK7 CSNK1A1;HEL-S-77p Casein kinase I isoform alpha yes no 0 0 0 7 0 1 35.513 35.585 3 0.0088482 7551 20230619_1887_Aki_TMTPro18x_K_F7 57.009 47.755 3080.3 1804.8 2549.4 3409.4 2480.5 2875.8 1239.3 3291.1 2039.1 1762.4 2521.1 2933 3009.6 1519.2 3033.8 3210.2 2674.7 2339.2 2839.2 1667.1 2636.2 3300.9 2553.7 2954.7 1354.9 3289.1 2051.5 1895.6 2588.5 2879.6 3049.5 1705.1 3065.6 3149.4 2560.3 2232.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8824700 283 1563 271 522 428 428 1 9606 Homo sapiens -0.00927862099979393 AAQQQEEQEEKEEEDDEQTLHR Unmodified 2698.159 0.15903902 3751 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 0 1 1 0 1 37.325 37.325 4 1.1167E-45 8900 20230619_1880_Aki_TMTPro18x_K_F1 256.92 243.03 39844 34609 36339 38878 36444 43551 42293 44252 50930 46465 50806 51704 60150 41999 47487 60958 54597 59021 36830 31717 37229 38987 38049 43700 42578 45211 51383 47001 52536 51952 60432 44682 48979 60798 52200 56063 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128240000 284 3751 272 523 429 429 1 9606 Homo sapiens -0.12211414274679555 AAQQQTVQQQPLAGSR Unmodified 1709.8809 0.8808945 3843 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 yes yes 0 0 0 7 0 1 35.605 35.677 3 1.5881E-14 7562 20230619_1887_Aki_TMTPro18x_K_F7 177.74 158.96 7143.2 8077.4 8877.7 8406 12529 14572 13107 13128 15023 11582 14686 13889 11777 13593 12151 13473 19189 15688 6634.1 7391.5 8930.5 8547.2 12742 14233 13236 13462 15165 11867 14952 13993 12164 14010 12744 13662 18268 14890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16703000 285 3843 273 524 430 430 1 9606 Homo sapiens 0.05434929092893981 AAQSANISVR Unmodified 1015.5411 0.54105675 2191 B1AK13;P35914 HMGCL Hydroxymethylglutaryl-CoA lyase, mitochondrial yes no 0 0 0 8 0 1 34.938 34.93 2 0.0048289 7474 20230619_1888_Aki_TMTPro18x_K_F8 104.43 73.822 13820 8540.5 14410 14692 19696 22520 16677 21546 21066 13030 22054 22680 18463 17865 23931 11765 22794 23370 12764 7876.2 14671 14425 19971 22138 17139 21833 21211 13927 22438 22419 19229 18266 24107 12612 21824 22072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7560400 286 2191 274 525 431 431 1 9606 Homo sapiens 0.03390786669365298 AAQSGPSERPGPPQR Unmodified 1533.7648 0.76480211 2683 B7Z390;Q59GF2;Q13444-11;Q13444-8;Q13444-2;Q13444-7;Q13444-6;Q13444-12;Q13444-5;Q13444-4;Q13444-3;Q13444 ADAM15 Disintegrin and metalloproteinase domain-containing protein 15 yes no 0 0 1 6 0 1 28.348 28.38 3 0.0021231 5226 20230619_1886_Aki_TMTPro18x_K_F6 83.692 61.494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 287 2683 275 526 432 432 1 9606 Homo sapiens 0.019270303128450905 AAQSLLNK Unmodified 843.48142 0.48141661 3102 Q9NUU7;I3L0H8;Q9UMR2;Q9UMR2-4;Q9UMR2-2;A0A0U4B4U6;F6QDS0;H3BQK0;Q53G16;Q7Z4W5;Q9HBZ9;Q2NL95;B4DS24;H3BTB3;H3BN59;H3BMQ5 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B yes no 0 0 0 1.5 0.5 1 1 46.764 46.841 3 0.00022971 12989 20230619_1881_Aki_TMTPro18x_K_F2 140.09 77.374 125330 82750 130810 131470 147160 148200 130540 138660 166210 132010 156430 157450 144690 117520 145740 129440 175080 165510 115790 76209 132640 128930 151050 148340 133740 142140 166800 134580 160460 157310 148090 123240 149700 131960 167160 156860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152790000 288 3102 276 527;528 433;434 434 2 9606 Homo sapiens 0.053415157259905754 AAQVAPAAASSLGNPPPPPPSELK Acetyl (Protein N-term) 2308.2063 0.20631097 1061 A0A0S2Q0B1;O14497;O14497-2 ARID1A AT-rich interactive domain-containing protein 1A yes no 1 0 0 6 0 1 59.594 59.656 3 1.2426E-05 17993 20230619_1886_Aki_TMTPro18x_K_F6 52.483 40.1 19712 16048 19914 18139 20866 19994 17802 22083 24105 20398 20781 22319 24409 19558 23970 20710 20693 24407 18228 14711 20208 18185 21504 20137 18340 22356 24069 20766 21650 22471 24763 20338 24184 21012 19856 23129 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26202000 289 1061 277 529 435 435 1 9606 Homo sapiens 0.10453606315559227 AAQVAQDEEIAR Unmodified 1299.6419 0.64189301 4204 Q8IVM0;Q8IVM0-2 CCDC50 Coiled-coil domain-containing protein 50 yes no 0 0 0 1 0 1 39.857 39.857 2 6.3522E-18 10015 20230619_1880_Aki_TMTPro18x_K_F1 237.84 202.39 50307 38819 40892 50689 46376 57198 44096 51070 63320 57648 62401 63662 61649 52321 52216 65188 65045 61018 46429 35645 42465 50277 47788 57183 45207 52757 63370 58106 64022 63975 62507 55013 54041 65034 62083 58015 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41062000 290 4204 278 530 436 436 1 9606 Homo sapiens 0.004057738615529161 AAREPNIDR Unmodified 1040.5363 0.53630573 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;F8VX11;F8VP89;F8VSC7;F8W0K0;F8VYE9;F8VRU1 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 1 3 0 1 28.021 28.133 3 0.005029 4906 20230619_1882_Aki_TMTPro18x_K_F3 79.489 59.348 31042 24154 37873 27807 45040 29864 34571 38544 37352 34371 36250 30535 39009 26183 31133 23969 39656 29869 28747 22150 37920 27852 45759 30301 35582 38641 37869 34831 37319 31025 39307 27084 32220 24480 37792 28343 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19518000 291 2578 279 531 437 437 1 9606 Homo sapiens 0.017659025266084427 AASAAAAELQASGGPR Acetyl (Protein N-term) 1468.727 0.72701962 4007 Q53RZ9;Q9HCN4;F8WD09 MBDin;GPN1 GPN-loop GTPase 1 yes no 1 0 0 2.5 0.5 1 1 50.572 50.633 2 1.426E-10 14739 20230619_1881_Aki_TMTPro18x_K_F2 137.62 130.02 51481 39396 45188 51800 50556 53040 57342 59967 64575 70229 70732 76401 76007 71426 68964 75629 81321 90354 47536 36178 46549 51308 52266 53701 57654 61048 65660 70597 72553 77086 77126 74058 70971 76738 77750 85629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97041000 292 4007 280 532;533 438 438 1 9606 Homo sapiens 0.011405193273276382 AASAAAASAAAASAASGSPGPGEGSAGGEK Acetyl (Protein N-term) 2428.1102 0.11023833 2263 B2R8R5;Q13263;Q13263-2 TRIM28 Transcription intermediary factor 1-beta yes no 1 0 0 4 0.816 1 1 1 53.62 53.667 3 8.259999999999999E-40 15339 20230619_1885_Aki_TMTPro18x_K_F5 96.44 87.97 99699 75366 75635 104730 94909 99580 94694 103360 114990 105570 112040 108970 126930 108910 112570 136340 115990 124630 91961 69256 79289 103230 97103 101160 96126 105390 115880 106700 115720 110560 128400 113780 115050 135850 111010 118470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 517320000 293 2263 281 534;535;536 439;440;441 441 3 9606 Homo sapiens -0.046692380531567323 AASAAFQENVGR Unmodified 1219.5945 0.59454889 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;A0A804HI02;B4DE53;I6L959;Q9BTW9-5;A0A804HIC0;A0A804HL21;I3L0V3 TBCD Tubulin-specific chaperone D yes no 0 0 0 5.5 0.5 1 1 41.162 41.253 2 3.0927E-09 10058 20230619_1886_Aki_TMTPro18x_K_F6 176.65 147.28 124410 103810 114470 122230 118140 131480 129940 121450 150570 136810 171000 171560 164720 139720 157960 171980 188800 171270 114980 95194 117210 122060 122790 132040 130980 125230 152940 138520 174220 171570 168010 146850 162510 172230 180220 162750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 140070000 294 1722 282 537;538 442;443 443 2 9606 Homo sapiens -0.0064646061878192995 AASAAGAAGSAGGSSGAAGAAGGGAGAGTR Unmodified 2174.006 0.0060480291 4680 Q9UKY7;A0A8I5KX85;Q9UKY7-2 CDV3 Protein CDV3 homolog yes no 0 0 0 7 0 1 34.282 34.359 3 9.0209E-22 7062 20230619_1887_Aki_TMTPro18x_K_F7 159.13 144.21 0 0 0 1151.4 0 1194.9 0 0 956.86 0 1000.6 0 902.79 1240.9 0 0 0 1113.4 0 0 0 1062.2 0 1171.8 0 0 916.4 0 1011 0 883.96 1173.6 0 0 0 1041.6 0 0 0 1 0 1 0 0 1 0 1 0 1 1 0 0 0 1 3790200 295 4680 283 539 444 444 1 9606 Homo sapiens -0.03399475299329424 AASAAGAAGSAGGSSGAAGAAGGGAGAGTRPGDGGTASAGAAGPGAATK Unmodified 3668.7123 0.71233221 4680 Q9UKY7;A0A8I5KX85;Q9UKY7-2 CDV3 Protein CDV3 homolog yes no 0 0 1 7.5 0.5 1 1 39.066 39.091 5 0.00016173 8874 20230619_1887_Aki_TMTPro18x_K_F7 63.941 58.222 763.57 1061.9 2177.5 1623.6 1017.8 1460.5 808.2 1618.4 1887.2 687.6 1981.5 2189.5 2128.5 1568.4 1129.5 2234.4 1835.2 2772.3 719.96 975.12 2073.1 1592.2 1144.8 1491.1 865.6 1617 1858.8 791.9 2034.1 2136.9 2119 1674.1 1211.6 2260.7 1755.5 2624 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234920000 296 4680 284 540;541 445 445 1 9606 Homo sapiens -0.01527546351599085 AASAATAAPTATPAAQESGTIPK Unmodified 2082.0593 0.059312378 3203 O00116;A0A7P0T984;A0A1B0GWA2;A0A7P0TAL3;A0A2R8YEL0;Q53SG6;A0A7P0T9C9;A0A7P0T8Q7;A0A7P0TA54;B8ZZ81;A0A7P0T857 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes no 0 0 0 6 0 1 46.043 46.129 3 2.99E-13 12201 20230619_1886_Aki_TMTPro18x_K_F6 129.51 109.93 28683 22392 22684 25957 25085 32302 28015 30548 36799 34437 42806 40969 44699 37798 29744 48280 50046 51793 26469 20535 23605 26005 26012 32133 28355 31422 37212 34803 43680 41224 44866 39652 31732 48484 47699 49149 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72799000 297 3203 285 542 446;447 446 2 9606 Homo sapiens 0.061565094306388346 AASADSTTEGTPADGFTVLSTK Unmodified 2126.0015 0.0015227276 3298 O75367;O75367-3;O75367-1;A0A8I5KRC6;A0A8I5KS04;A0A994J4J7 H2AFY Core histone macro-H2A.1 yes no 0 0 0 4 0.816 1 1 1 56.294 56.329 3 1.6605E-37 16749 20230619_1883_Aki_TMTPro18x_K_F4 221.86 210.92 303320 260030 281720 311610 257530 299330 293110 297300 295910 298720 294990 284320 366710 281410 313060 349410 329240 327190 280390 238460 287790 310330 270490 303570 293690 303960 301420 301370 305790 289370 369230 294120 320370 348700 314850 311010 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 2171700000 298 3298 286 543;544;545 448;449;450;451;452;453 450 6 9606 Homo sapiens -0.016437972854873806 AASADYLRPR Unmodified 1118.5833 0.58325592 144 B0QYZ7;B4DR76;B1AKL4;A0A024R1K0;Q9NRA8-2;Q9NRA8;Q9NRA8-3 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter yes no 0 0 1 1 0 1 36.588 36.588 3 0.0047416 8625 20230619_1880_Aki_TMTPro18x_K_F1 57.267 38.522 58116 31087 54359 57529 92047 68936 68159 69055 77684 70280 89677 95975 88382 83001 77254 63580 107410 95306 53594 28721 56074 56035 91746 68889 70405 70571 79074 71753 91419 95761 89789 85016 80329 66040 102400 90230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10700000 299 144 287 546 454 454 1 9606 Homo sapiens 0.028707620777595366 AASAFFTYVSLSQEGR Unmodified 1732.842 0.84204938 3205 O00154-4;O00154-6;O00154-7;O00154;O00154-5;B4DUX0 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 3.67 0.471 1 2 63.11 63.124 2;3 5.471499999999999E-19 19730 20230619_1882_Aki_TMTPro18x_K_F3 251.3 223.29 54535 47500 57480 59040 46363 52762 51416 50229 61263 57805 50090 56185 54309 55625 59734 54668 55301 60033 50470 43573 57981 58599 49190 53778 51878 51720 61430 57983 52167 57048 55616 57317 60374 55279 52987 56946 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135790000 300 3205 288 547;548;549 455;456 455 2 9606 Homo sapiens 0.004942037385262665 AASCVLLHTGQK Acetyl (Protein N-term) 1325.6762 0.67617003 3450 V9HWI0;P14550;Q5T621;V9GYG2;V9GYP9 HEL-S-165mP;AKR1A1 Alcohol dehydrogenase [NADP(+)] yes no 1 0 0 8 0 1 47.531 47.589 2 0.0049854 12504 20230619_1888_Aki_TMTPro18x_K_F8 45.368 26.753 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 301 3450 289 550 457 457 1 9606 Homo sapiens 0.02635898748803811 AASDIAMTELPPTHPIR Oxidation (M) 1834.9247 0.92473315 3709 V9HW98;P62258;G9K389;G9K388;P62258-2;B7ZA86;K7EM20 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 1 0 5.25 0.829 1 1 2 44.999 45.069 3 5.137E-15 11566 20230619_1885_Aki_TMTPro18x_K_F5 169.37 150.13 291930 206160 258210 326440 332030 385720 326060 338170 430270 347030 385290 396850 428420 362810 409490 392400 421840 405830 269450 189800 266660 320260 339290 384220 332260 348990 430430 352010 399420 399480 434980 376930 417290 394710 403390 385370 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 366220000 302 3709 290 551;552;553;554 458;459;460;461 458 2391 4 9606 Homo sapiens 0.040667774749863383 AASDIAMTELPPTHPIR Unmodified 1818.9298 0.92981853 3709 V9HW98;P62258;G9K389;G9K388;P62258-2;B7ZA86;K7EM20 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 0 0 6 0.816 1 1 1 48.918 48.998 3 3.5942E-20 13229 20230619_1885_Aki_TMTPro18x_K_F5 194.01 174.34 291940 232340 292130 326590 300970 323560 303060 340980 368930 360010 345350 347080 380780 320660 351270 362090 418520 377320 269900 213480 297040 321960 312000 327760 307650 347570 371330 362420 357020 352010 386160 333910 361460 364060 399500 358370 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 838590000 303 3709 290 555;556;557 462;463;464;465;466 463 5 9606 Homo sapiens 0.05311081337617907 AASDIWKPVLSIDTEPR Unmodified 1896.9945 0.99452728 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 1 7 0 1 60.561 60.604 3 0.0001275 18075 20230619_1887_Aki_TMTPro18x_K_F7 91.414 77.061 44758 37864 40963 49899 35023 52879 46140 44213 46930 56559 54350 56748 62098 50392 55907 56800 56786 64330 41366 34759 41911 49416 37261 53006 45914 46114 48111 56494 55775 57362 62812 52558 57014 57397 54376 60994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102130000 304 4372 291 558 467 467 1 9606 Homo sapiens 0.0819097941525797 AASEAAVVSSPSLK Acetyl (Protein N-term) 1357.7089 0.70890994 4284 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 1 0 0 4 0 1 53.688 53.707 2 2.4878E-11 15685 20230619_1883_Aki_TMTPro18x_K_F4 85.958 70.698 25593 22585 26820 30304 30764 40657 33366 35511 40678 34730 37200 34119 39686 36901 37265 43076 42218 41707 23686 20734 27235 30092 31771 40181 33717 36597 40872 35147 38421 34793 40338 38286 38241 43097 40343 39630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24322000 305 4284 292 559 468 468 1 9606 Homo sapiens 0.044363843526753044 AASGESGTSGGGGSTEEAFMTFYSEVK Acetyl (Protein N-term);Oxidation (M) 2701.1337 0.13373547 3321 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 1 1 0 2.5 0.5 1 1 64.015 64.034 3 5.3419E-14 20132 20230619_1882_Aki_TMTPro18x_K_F3 64.68 61.582 52454 42215 41510 55651 52952 56977 55847 57396 55260 62659 66518 61744 66711 57032 62291 66951 57692 68827 48414 38760 43336 55090 54176 57522 56129 58747 56815 62995 67699 62587 67853 59517 63198 67214 55321 65312 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 73044000 306 3321 293 560;561 469;470;471 470 1950 3 9606 Homo sapiens -0.1487860512147563 AASGESGTSGGGGSTEEAFMTFYSEVK Acetyl (Protein N-term) 2685.1388 0.13882084 3321 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 1 0 0 3 0.816 1 1 1 65.337 65.354 3 6.1287E-07 20947 20230619_1881_Aki_TMTPro18x_K_F2 66.501 62.063 8389.1 7943 9001.8 8347.6 8715.3 9665.8 9434.8 9672.3 9111.2 10101 11721 12108 12493 10364 9978.6 13408 11316 14107 7769.5 7272.9 9085.1 8420.9 9090.4 9677.7 9467.7 9891.3 9408.1 10243 11937 12147 12604 10910 10285 13453 10833 13381 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47316000 307 3321 293 562;563;564 472 472 1 9606 Homo sapiens -0.13634301258889536 AASGTQNNVLR Unmodified 1129.584 0.5839842 1799 B4E3S6;A0A8Q3SIM0;B2R6W1;P10643 C7 Complement component C7 yes no 0 0 0 7 0 1 33.427 33.509 2 0.00085027 6730 20230619_1887_Aki_TMTPro18x_K_F7 107.79 81.849 2328.4 1574.3 1724.9 5002.1 17889 21216 19604 24312 24198 4149.1 1814.6 4114.6 8534 1923.5 3536 2761.2 3928.6 2639.8 2146.1 1468.4 2082.4 4971.1 17363 20265 19767 24039 23444 5297.8 3222.3 4109.7 8233.1 2125.5 3698.9 2757.4 3746.2 2513.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6868700 308 1799 294 565 473 473 1 9606 Homo sapiens 0.024375567267725273 AASHEQAAAALK Unmodified 1166.6044 0.60438529 990 A0A0C4DFT3;A0A590UKA8;A0A590UJ18;Q12959-5;Q12959-3;A0A590UJD9;A0A590UJ68;Q12959-6;A0A590UJS9;A0A590UJC5;Q12959-7;Q12959-2;Q12959;A0A590UJR5;A0A590UJ08;Q12959-4;Q12959-9;A0A590UJ29;Q12959-8;C9JUA9;A0A590UJR4;A0A590UJX2;A0A590UJ64;E7EQD7;A0A590UK81;Q59FC4;A0A590UK48;B4DF78;A0A590UJ81;A0A590UJ25;A0A590UJL2;A0A590UK70;A0A590UK02 DLG1 Disks large homolog 1 yes no 0 0 0 6 0 1 35.423 35.476 3 1.7291E-06 7795 20230619_1886_Aki_TMTPro18x_K_F6 144.47 112.54 30934 20438 33078 32661 47075 45617 42128 38801 54524 33192 39164 35919 37040 36005 39775 28809 42165 35194 28586 18823 33627 32130 47619 44984 43118 39962 54163 33987 40798 36346 38039 36747 40464 29469 40272 33385 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83911000 309 990 295 566 474 474 1 9606 Homo sapiens 0.027747273865998068 AASIFGGAK Unmodified 820.4443 0.44430282 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;F8VX11;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 0 3 0 1 50.392 50.467 2 0.00051347 14317 20230619_1882_Aki_TMTPro18x_K_F3 150.4 103.33 309230 192550 206870 250110 202840 285640 241010 248290 394320 287790 273440 304770 396530 301730 201550 542070 515710 471020 284730 176960 218920 248220 213110 285100 245410 257290 388010 289610 291520 309030 391780 324100 227580 535710 490080 448290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 300630000 310 2578 296 567 475 475 1 9606 Homo sapiens 0.026898441802472917 AASIFGGAKPVDTAAR Unmodified 1530.8154 0.8154407 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;F8VX11;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 1 3 0 1 48.269 48.348 3 1.8073E-13 13415 20230619_1882_Aki_TMTPro18x_K_F3 169.94 149.15 353690 379690 378170 428490 335750 410170 394100 351680 350460 469220 527610 253140 251360 228810 433580 202210 232500 153190 327880 347750 381840 428490 353720 414890 392850 366610 366640 461140 519290 266380 273650 235500 425320 201750 223850 146310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 650890000 311 2578 297 568 476 476 1 9606 Homo sapiens 0.07126559637868013 AASITSEVFNK Unmodified 1165.5979 0.59790293 4746 Q9Y5B9;Q0VGA3 SUPT16H FACT complex subunit SPT16 yes no 0 0 0 7.5 0.5 1 1 54.784 54.849 2 1.5435000000000001E-30 15620 20230619_1888_Aki_TMTPro18x_K_F8 280.2 238.97 142870 105020 119730 145650 132720 164890 149670 153880 157260 173990 172410 190440 209430 176820 158840 226670 201480 205180 131840 96515 123930 143930 137480 164940 150180 158490 160520 175240 177890 192160 210190 185440 165140 225580 192390 195100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 486600000 312 4746 298 569;570 477 477 1 9606 Homo sapiens 0.02172789435235245 AASLELSEVKK Unmodified 1173.6605 0.66050319 1754 Q08378;A0A8I5KYV8;Q08378-2;A0A8I5KWY9;A0A8I5KSF0;A0A8I5KQH9;A0A8I5KXF8;A0A8I5QKX6;A0A8I5KTE5;A0A8I5KQ98 GOLGA3 Golgin subfamily A member 3 yes no 0 0 1 8 0 1 48.614 48.68 3 0.0058012 13006 20230619_1888_Aki_TMTPro18x_K_F8 71.221 49.849 46398 37810 45350 45380 48128 59444 50103 49104 56607 58449 55906 56400 55458 49962 56293 60958 64368 57665 42894 34681 46205 45391 49882 58793 50611 51120 57301 58515 57388 57126 56685 52317 57697 60887 61462 54830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18503000 313 1754 299 571 478 478 1 9606 Homo sapiens 0.08061935503405948 AASLVGK Acetyl (Protein N-term) 686.39629 0.39629 1079 A0A0S2Z3W7;Q9BY32;A0A0S2Z423;Q9BY32-3 ITPA Inosine triphosphate pyrophosphatase yes no 1 0 0 5.5 0.5 1 1 50.434 50.51 2 0.0091708 14110 20230619_1886_Aki_TMTPro18x_K_F6 50.039 45.185 301680 241500 262970 282040 318320 338390 330100 306550 400270 325190 378450 372360 371450 319930 324110 423970 450650 417680 278620 221470 271300 282260 326660 337250 334210 315940 402650 329270 388910 374340 377270 337190 337940 423710 429720 396900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 242650000 314 1079 300 572;573 479;480 480 2 9606 Homo sapiens 0.04054770260188434 AASQGYTVAR Unmodified 1022.5145 0.51450765 3971 Q3ZCU6;Q9UBV2 SEL1L Protein sel-1 homolog 1 yes no 0 0 0 7 0 1 33.515 33.596 2 6.1156E-06 6766 20230619_1887_Aki_TMTPro18x_K_F7 167.67 143.7 26648 15695 31996 32026 54003 53520 38705 42735 45334 30433 49994 53303 45386 38820 45977 22427 60127 49191 24639 14515 32380 31244 53887 52218 40128 44057 45932 32135 50899 52544 46506 39678 47381 24381 57317 46479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27181000 315 3971 301 574 481 481 1 9606 Homo sapiens 0.004150977780454923 AASQILILK Unmodified 955.60662 0.60661712 1359 A0A2R8YDC1;A0A2R8Y6V8;A8K2Q2;O15439-4;O15439-3;O15439-2;O15439;Q59GY6;O75555 ABCC4;MOAT-B Multidrug resistance-associated protein 4 yes no 0 0 0 3 0 1 57.182 57.215 3 0.061091 17278 20230619_1882_Aki_TMTPro18x_K_F3 54.608 24.038 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 316 1359 302 575 482 482 1 9606 Homo sapiens 0.12703807862374106 AASQSTQVPTITEGVAAALLLLK Unmodified 2281.2893 0.28931231 2863 E1NZA1;Q92616;A0A024RBS1;B4DM32 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 4.5 0.5 1 1 67.395 67.424 3 0.0038492 21354 20230619_1883_Aki_TMTPro18x_K_F4 64.422 45.347 3900.3 3683.8 2779.6 2722.3 2946.2 2669.9 4368.4 2924.1 4992.5 3757.6 4686.9 5683.1 3175.6 4942.4 4246.1 3618.4 3094.9 5072.2 3601.4 3364.5 2919.4 2833.2 3083.5 2716.1 4335.7 2997.4 5030.2 3814.8 4765.6 5650.2 3353.6 5042.7 4232.9 3742.3 2986 4794.9 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12463000 317 2863 303 576;577 483 483 1 9606 Homo sapiens 0.1999192304360804 AASSAAQGAFQGN Unmodified 1178.5316 0.53161428 1239 Q6IBK3;A8K769;A0A140VK92;O15127 SCAMP2 Secretory carrier-associated membrane protein 2 yes no 0 0 0 5 0 1 42.101 42.184 2 0.0030426 10421 20230619_1885_Aki_TMTPro18x_K_F5 86.624 73.997 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 318 1239 304 578 484 484 1 9606 Homo sapiens -0.05051026406817982 AASSSSPGSPVASSPSR Unmodified 1530.7274 0.72741355 1595 Q92538;Q92538-2;Q92538-3;A0A669KBG8;A0A669KB10;A0A7P0RGV0;A0A7I2YQM2;A0A7I2V2L5;A0A7I2V514;A0A7I2YQ65;A0A7I2V452;A0A7I2V3E5;A0A7I2V350 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes no 0 0 0 6 0 1 32.793 32.829 3 0.00010621 6826 20230619_1886_Aki_TMTPro18x_K_F6 89.311 80.491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 319 1595 305 579 485 485 1 9606 Homo sapiens -0.016721057434324393 AASTAPSSTSTPAASSAGLIYIDPSNLR Unmodified 2705.3508 0.35080295 2891 E7EMW7;O95071-2;O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 0 0 0 1 0 1 59.796 59.796 3 7.5096E-21 18394 20230619_1880_Aki_TMTPro18x_K_F1 160 145.59 5626.5 4844.8 5327.1 7415.8 4283.6 7515.8 5812.9 6263 8200.4 6494.6 6485.5 5402.3 7924.5 6345 6142.3 8034.4 9283.1 7387.2 5202.1 4454.9 5436.8 7271.2 4600.2 7553 5846.5 6491.9 8145.6 6525.1 6788.2 5574.5 7959.5 6605.8 6459.9 8004.6 8838.5 7030.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28613000 320 2891 306 580 486 486 1 9606 Homo sapiens 0.06634158214228592 AASTASHRPIK Acetyl (Protein N-term) 1179.636 0.63601977 2890 E7EMN6;P41236;Q6NXS2;E7EUI7;Q6NXS1 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2;Protein phosphatase inhibitor 2-like protein 3 yes no 1 0 1 7.5 0.5 1 1 28.69 28.755 3 0.0013282 4811 20230619_1887_Aki_TMTPro18x_K_F7 56.225 42.23 17322 11643 20733 21479 20458 24908 25146 23383 18610 18233 20859 23898 21086 15983 26286 16440 28526 27958 16025 10744 20785 20912 21384 24867 24884 23865 19416 18864 21348 23719 21750 16797 26704 17186 27268 26435 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23180000 321 2890 307 581;582 487;488 487 2 9606 Homo sapiens 0.0533872014057124 AATAAADFTAK Unmodified 1036.5189 0.51892433 4727 Q9Y3F4;Q9Y3F4-2 STRAP Serine-threonine kinase receptor-associated protein yes no 0 0 0 6.5 0.5 1 1 47.29 47.374 2 3.4931E-09 12351 20230619_1887_Aki_TMTPro18x_K_F7 222.28 179.16 301530 248110 264730 305340 305550 321580 321640 307130 394990 390060 376480 373050 422140 326290 301860 437160 442680 370230 278540 227620 272830 303840 314640 323700 325570 317020 397670 389290 388950 377960 423610 344050 317550 433380 421690 352620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 262200000 322 4727 308 583;584 489;490 490 2 9606 Homo sapiens 0.00212562200931643 AATALLEAGLAR Unmodified 1155.6612 0.66117189 2482 B4DGK8;E9PQM0;Q8WUK0-2;Q8WUK0-3;Q8WUK0 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes no 0 0 0 1 0 1 58.397 58.397 2 0.024705 17845 20230619_1880_Aki_TMTPro18x_K_F1 77.288 56.806 34631 31996 31004 41081 33126 43979 38808 40312 46679 38879 37156 44235 44842 38940 40926 41500 45697 48752 32021 29355 31901 40758 34470 44143 39036 41404 46719 39549 38959 44458 45351 40483 41950 42069 43698 46217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145090000 323 2482 309 585 491 491 1 9606 Homo sapiens 0.08956774943112578 AATALLEAGLAR Acetyl (Protein N-term) 1197.6717 0.67173657 2482 B4DGK8;E9PQM0;Q8WUK0-2;Q8WUK0-3;Q8WUK0 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes no 1 0 0 4.5 0.5 1 1 64.203 64.23 2 0.0025596 19849 20230619_1885_Aki_TMTPro18x_K_F5 43.297 28.36 8198.6 8976.1 7994.7 7715.5 7188.8 8950.2 8654.1 9360 10740 10524 9802.1 11433 12465 9408.8 9037 10900 13786 14224 7595.5 8202.4 8125.9 7922.6 7581.4 8971.4 8708 9561.2 10791 10600 10225 11489 12472 9862.5 9521.3 11108 13148 13473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7310000 324 2482 309 586;587 492 492 1 9606 Homo sapiens 0.08080757597554111 AATASAGAGGIDGKPR Acetyl (Protein N-term) 1440.7321 0.732105 3104 I3L1P8;Q6IBH0;Q02978;Q02978-2 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 1 0 1 5 0 1 39.064 39.156 2 9.0141E-19 9163 20230619_1885_Aki_TMTPro18x_K_F5 110.74 97.558 17199 16009 17278 19956 20179 24430 22698 25572 26221 23535 26131 22567 27184 24109 22948 24721 26796 23802 15918 14683 17611 19887 20817 24381 22852 25975 26500 23871 26832 23024 27518 24847 23630 24780 25580 22628 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52539000 325 3104 310 588 493 493 1 9606 Homo sapiens 0.029368231899979946 AATDDDLHR Unmodified 1012.4574 0.4573867 1368 B3KRT9;H7BXF5;A0A2R8YDB8;Q9H0E3-2;Q9H0E3;Q9H0E3-3 SAP130 Histone deacetylase complex subunit SAP130 yes no 0 0 0 1 0 1 28.732 28.732 3 2.6562E-12 5500 20230619_1880_Aki_TMTPro18x_K_F1 193.1 159.01 6673.3 4478.7 10132 9161.5 14035 13819 10160 13862 12290 9815 11980 15365 8942.9 10001 12868 4842.4 15759 15111 6190.2 4139.6 10054 8923 14146 13614 10547 14036 12381 10301 12203 15137 9430.3 10222 13129 5550 15045 14246 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4561400 326 1368 311 589 494 494 1 9606 Homo sapiens -0.0483436949833731 AATFFGEVVK Acetyl (Protein N-term) 1109.5757 0.57571092 2312 B2RD51;O95456;O95456-2;F8WBH7 PSMG1 Proteasome assembly chaperone 1 yes no 1 0 0 5 0.816 1 1 1 64.804 64.837 2 1.3837E-09 20264 20230619_1886_Aki_TMTPro18x_K_F6 89.355 54.249 186640 162690 179210 191580 144590 189650 183720 175630 187740 189440 188990 179090 201510 168200 194410 223030 208560 217180 172600 149160 182250 191100 154210 191560 183160 180830 191120 190410 194370 182030 204920 176790 198760 222820 199470 206310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 396130000 327 2312 312 590;591;592 495;496 496 2 9606 Homo sapiens 0.0253060975749122 AATGEEVPR Unmodified 928.46141 0.46140945 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2;O15294-4 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 0 1.5 0.5 1 1 32.847 32.847 2 0.0022935 6815 20230619_1881_Aki_TMTPro18x_K_F2 110.87 79.499 21828 10282 27386 26840 36135 40743 23843 32156 30669 24355 36521 48619 38841 32805 38381 19838 43534 47024 20173 9564.9 27479 25888 36518 39905 25004 33217 31073 25771 37383 47650 39541 33700 39214 21728 41628 44363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35801000 328 1842 313 593;594 497;498 498 2 9606 Homo sapiens -0.005682800046201919 AATGEEVSAEDLGGADLHCR Unmodified 2056.912 0.91199621 1223 Q9HCC0;Q9HCC0-2;A0A804HLJ9;A0A140VK29;A0A804HKE8;A0A804HJ24;A0A804HK37;A0A804HJ84;A0A804HJ31;A0A804HL02;A0A804HJL2;A0A804HJC1;A0A804HHS4;D6RDF7;A0A0S2Z5R4;A0A804HIH3;A0A804HJW5;D6R9R1;A0A0D9SFE9;A0A804HJW2;B3KR24;D6RD67 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 1.5 0.5 1 1 44.384 44.425 3 1.087E-11 12100 20230619_1880_Aki_TMTPro18x_K_F1 138.97 129.69 59374 54887 64296 67994 68393 72101 71241 63952 78130 74439 73461 69745 78344 65832 82264 75074 79961 69590 54984 50338 64986 67640 70750 72428 71873 66207 79037 74550 75806 70890 79982 68528 83410 75023 76457 66193 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259790000 329 1223 314 595;596 499;500 499 2 9606 Homo sapiens -0.07418330445807442 AATLSTLAGQPLLER Unmodified 1539.8621 0.86205654 2790 CON__Q03247 yes yes 0 0 0 1 0 1 58.698 58.698 3 1.4671E-07 17967 20230619_1880_Aki_TMTPro18x_K_F1 123.18 62.426 + 33141 25865 33753 34918 26013 40008 34496 37176 36253 42736 48262 49740 49630 37075 39522 55773 62247 66273 30641 23757 34141 34580 27944 39967 34375 38318 37326 43082 49009 49768 50116 39689 41711 56270 59366 62821 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 281230000 330 2790 315 597 501 501 1 9606 Homo sapiens 0.11371999469156435 AATMTAAGHHAEVVVDPEDER Unmodified 2205.012 0.012044609 3871 Q13895;F8WBL2 BYSL Bystin yes no 0 0 0 2.5 0.5 1 1 40.296 40.361 4 1.649E-22 9960 20230619_1881_Aki_TMTPro18x_K_F2 178.32 170.52 35173 27911 36885 39670 43953 45662 43449 43123 46383 43834 50271 54152 52327 46987 54584 47625 50022 54340 32530 25650 37448 39161 45050 45656 43934 44255 47240 44580 51528 54248 53453 48730 55175 48254 47935 51525 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111510000 331 3871 316 598;599 502 502 1 9606 Homo sapiens -0.042260931120836176 AATQFWR Unmodified 878.43989 0.43988615 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 3 0 1 46.939 47.018 2 0.026043 12796 20230619_1882_Aki_TMTPro18x_K_F3 97.075 86.89 639220 458490 548360 535750 634920 712860 690200 668980 828430 618790 578280 493560 605620 508180 658320 579900 619340 531340 589920 420660 565890 537190 654620 706380 696670 684900 825700 624790 605940 507560 619760 527630 665860 579220 592350 505510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 321640000 332 909 317 600 503 503 1 9606 Homo sapiens -0.004196202426783202 AATSPALFNR Unmodified 1046.5509 0.55089316 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2 0 1 43.891 43.973 2 1.1055E-06 11664 20230619_1881_Aki_TMTPro18x_K_F2 137.14 99.408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 333 3881 318 601 504 504 1 9606 Homo sapiens 0.029479746747256286 AAVAATAAAK Acetyl (Protein N-term) 885.49198 0.4919813 4138 Q6Y1H2 HACD2 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 yes yes 1 0 0 4.5 0.5 1 1 46.578 46.638 2 0.00026306 12337 20230619_1885_Aki_TMTPro18x_K_F5 70.919 52.136 97011 67304 91408 89837 99161 122220 114220 103850 165640 75941 66495 70872 76465 54317 83001 83432 73804 73880 89576 61843 93459 89283 102990 120650 115750 106630 161610 78292 73376 71646 78007 58156 83781 82836 70704 70273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73611000 334 4138 319 602;603 505 505 1 9606 Homo sapiens 0.044654983804207404 AAVAGEDGR Unmodified 844.40389 0.40389457 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;P07910-4;D3DPI2;G3V5X6;G3V3K6;G3V251;G3V575;G3V555;B4DSU6;Q6PKD2;P0DMR1;A0A0G2JNQ3;A0A0G2JPF8;B7ZW38;B2RXH8;O60812;B4DMJ1 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL3;HNRNPCL2;HNRNPCL1 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 0 0 0 1 0 1 29.634 29.634 2 0.00032126 5839 20230619_1880_Aki_TMTPro18x_K_F1 139.97 106.45 37844 16282 71383 68034 143110 107600 70763 128110 59154 25818 83668 119120 40371 69586 104280 12166 94908 80316 35146 15347 70698 64896 140510 106250 75381 126550 61753 34323 83157 114870 45837 70228 103870 17287 90797 75615 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45844000 335 2226 320 604 506 506 1 9606 Homo sapiens -0.02453122210181391 AAVATFLQSVQVPEFTPK Unmodified 1932.0357 0.03566381 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 4.5 0.5 1 1 64.649 64.676 3;4 0.00031406 20037 20230619_1885_Aki_TMTPro18x_K_F5 78.069 58.994 59624 47440 69030 55954 38733 49615 72559 74949 44486 72222 81236 81231 84956 46269 64092 92858 60292 87372 55195 43511 68826 55803 43476 51218 70413 74731 48440 73262 81775 80927 85383 51447 65506 92149 57911 82945 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252430000 336 134 321 605;606 507;508 508 2 9606 Homo sapiens 0.10692740454715022 AAVAVVPLVSEDK Unmodified 1296.7289 0.7289171 2527 B4DLG2;O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 0 0 0 6 0 1 56.994 57.066 3 0.0073137 16892 20230619_1886_Aki_TMTPro18x_K_F6 69.03 53.139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 337 2527 322 607 509 509 1 9606 Homo sapiens 0.09242180083288076 AAVDAGFVPNDMQVGQTGK Oxidation (M) 1919.9047 0.90472599 1075 P13804;A0A0S2Z3L0;A0A0S2Z3M4;P13804-2;H0YLU7;A0A8I5KVL5;A0A8I5KYH4;A0A8I5KYP7;A0A8I5KUF3;H3BV91;H0YKF0;A0A8I5KT03;A0A8I5KUR2;A0A8I5KVC9;H0YK49 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes no 0 1 0 5.5 0.5 1 1 51.134 51.21 3 5.0186E-06 14436 20230619_1886_Aki_TMTPro18x_K_F6 96.054 84.793 94690 80105 89344 107600 95985 109340 106450 95851 112750 107040 121510 110500 112810 101770 107830 120820 114140 121650 87535 73551 91423 106380 99484 110110 106910 99218 114820 107720 123810 111790 115210 106250 110170 121130 109200 115510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 140400000 338 1075 323 608;609 510;511 511 637 2 9606 Homo sapiens -0.018430182556357977 AAVDAGFVPNDMQVGQTGK Unmodified 1903.9098 0.90981137 1075 P13804;A0A0S2Z3L0;A0A0S2Z3M4;P13804-2;H0YLU7;A0A8I5KVL5;A0A8I5KYH4;A0A8I5KYP7;A0A8I5KUF3;H3BV91;H0YKF0;A0A8I5KT03;A0A8I5KUR2;A0A8I5KVC9;H0YK49 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes no 0 0 0 6 0 1 55.808 55.883 3 3.9929E-10 16395 20230619_1886_Aki_TMTPro18x_K_F6 121.34 103.19 115000 103030 114390 113180 103950 145380 147080 135110 163990 143190 138350 144240 165510 131960 137310 164760 154890 168780 106400 94394 116160 113930 110200 144270 146260 138950 165040 144370 144380 145980 166680 138320 141250 165180 148120 160220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 371940000 339 1075 323 610 512 512 1 9606 Homo sapiens -0.005987143930269667 AAVDLEK Acetyl (Protein N-term) 786.41233 0.41233399 3469 P17858;F8WEU2 PFKL ATP-dependent 6-phosphofructokinase, liver type yes no 1 0 0 1.5 0.5 1 1 50.529 50.555 2 0.003758 14572 20230619_1880_Aki_TMTPro18x_K_F1 99.919 83.365 54159 40379 50803 47822 51294 51740 48045 52591 63997 54763 70485 73744 62540 57368 63280 58856 77174 74331 50026 37045 51861 47759 53153 52063 49162 53723 64500 55813 71685 73430 64155 59785 65074 60007 73685 70446 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72712000 340 3469 324 611;612 513 513 1 9606 Homo sapiens 0.010584317064399329 AAVEEGIVLGGGCALLR Unmodified 1683.8978 0.89779012 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 6.2 0.748 1 2 2 61.611 61.658 2;3 3.3325999999999996E-59 18836 20230619_1886_Aki_TMTPro18x_K_F6 308.12 238.41 545370 479610 559020 566590 472630 552950 607250 613810 644350 572160 547770 509000 656420 518440 514370 705190 589880 671360 504630 439720 565560 565110 501500 561560 605750 621750 650420 578650 570990 520490 659580 544600 530800 703120 564230 637730 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2425500000 341 272 325 613;614;615;616;617 514;515;516 515 3 9606 Homo sapiens 0.08319713654486804 AAVEGTVEAGATVESTAC Unmodified 1721.7778 0.77779414 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;P49321-2;Q5T626;Q5T624;Q9P1N1;H0YDS9;H0YF33 NASP Nuclear autoantigenic sperm protein yes no 0 0 0 1.75 0.433 1 3 52.511 52.535 2;3 3.4475E-13 15523 20230619_1881_Aki_TMTPro18x_K_F2 157.24 146.72 55043 46569 52067 64993 53173 67669 55150 63912 66636 60460 59818 64110 73914 55535 64066 67343 64281 62521 50885 42777 53240 64121 55293 68096 55878 65450 66976 61405 62340 64626 74469 58217 65347 67212 61489 59441 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81535000 342 3605 326 618;619;620;621 517;518;519 518 3 9606 Homo sapiens -0.05422364200580887 AAVELEEPEDAR Unmodified 1327.6256 0.62557424 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 0 1 0 1 44.159 44.159 2 2.4439E-17 11932 20230619_1880_Aki_TMTPro18x_K_F1 223.31 198.09 100730 83674 80231 97856 112800 117860 115980 105240 140630 112260 127970 127360 131370 115500 115410 120750 136430 128450 92997 76724 83809 97903 114700 117410 117440 108600 141280 113620 132020 128210 133250 119790 118820 121690 130280 121950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115570000 343 3337 327 622 520 520 1 9606 Homo sapiens -0.025133520951840183 AAVENLPTFLVELSR Unmodified 1657.9039 0.90392136 3904 Q14974;B2RBR9;J3QR48 KPNB1 Importin subunit beta-1 yes no 0 0 0 2.8 2.64 2 2 1 64.925 64.932 2;3 1.6042E-14 20475 20230619_1880_Aki_TMTPro18x_K_F1 223.22 185.67 98175 75755 85722 91368 87595 68559 95993 100960 89258 107360 114400 104530 105080 94422 95094 121030 102670 118420 90652 69503 88139 90747 90832 71895 96152 101080 92383 107980 115710 105970 107090 99119 97447 120970 98273 112440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1118000000 344 3904 328 623;624;625;626;627 521;522;523 521 3 9606 Homo sapiens 0.10128555157621122 AAVESLGFILFR Unmodified 1321.7394 0.73942221 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;Q05BX4;A0A7I2V4X0;A0A7I2YQI9 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 3.5 0.5 1 1 65.053 65.075 2 1.6034E-12 20440 20230619_1883_Aki_TMTPro18x_K_F4 195.58 153.5 34289 24367 31631 35034 26344 36150 31159 26870 53590 33391 29537 36671 38363 34186 42216 37405 32794 53079 31659 22406 32300 34497 28020 36233 31806 28296 52314 33563 31883 36966 39069 35538 42320 38424 31608 50174 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21355000 345 832 329 628;629 524 524 1 9606 Homo sapiens 0.09142207528361723 AAVETLGVPCFLGGMAR Oxidation (M) 1763.8699 0.86986081 1903 A1L0T0;M0R026;Q59GP4;M0QZX5 ILVBL Acetolactate synthase-like protein yes no 0 1 0 1.5 0.5 1 1 61.625 61.63 3 0.014379 19305 20230619_1881_Aki_TMTPro18x_K_F2 53.008 37.621 63695 50840 62285 62294 69433 68195 67073 63678 72528 75501 73016 66319 77611 65917 73974 82717 76313 81903 58878 46646 63481 62056 71427 68439 67944 65686 73650 75399 75058 67767 78891 68912 75466 82781 73031 77780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85497000 346 1903 330 630;631 525 525 1218 1 9606 Homo sapiens 0.018480674027159694 AAVFEEIDTYER Unmodified 1441.6725 0.67252444 4346 Q96F86;H3BSQ0;H3BPW9 EDC3 Enhancer of mRNA-decapping protein 3 yes no 0 0 0 2 0 1 58.323 58.336 2 2.4439E-17 17943 20230619_1881_Aki_TMTPro18x_K_F2 223.31 209.15 36740 30181 31458 34245 29055 34600 35736 35788 41834 43626 41231 45129 45766 40527 42801 48717 43993 53866 33933 27667 32380 34266 30589 34991 35837 36690 42269 43712 42561 45578 46435 42393 43678 49094 42149 51071 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16835000 347 4346 331 632 526 526 1 9606 Homo sapiens -0.030644925440810766 AAVHLEGK Unmodified 823.4552 0.45520186 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9 VCL;HEL114 Vinculin yes no 0 0 0 6.5 0.5 1 1 37.737 37.813 3 0.00098289 8665 20230619_1886_Aki_TMTPro18x_K_F6 119.27 83.979 120050 55457 149300 163860 263350 266700 226150 260240 279140 157990 207320 240000 219860 185560 226750 100090 256600 211440 110930 51740 151050 157680 263300 261490 231740 263380 278130 167800 216910 237820 224350 188810 231350 108650 244910 199820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114410000 348 51 332 633;634 527;528 527 2 9606 Homo sapiens 0.036412465545254236 AAVHYDR Unmodified 830.4035 0.40350064 4189 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 0 0 3.5 0.5 1 1 23.189 23.298 2 0.020304 3853 20230619_1882_Aki_TMTPro18x_K_F3 104.76 75.866 77666 29183 109300 113080 160300 151780 111630 156230 105460 62943 138600 153230 87850 109200 117260 35080 148720 127690 71815 27468 109140 107640 160850 150490 115370 156700 108860 71328 138580 149860 92912 110080 119980 41923 141840 120380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86747000 349 4189 333 635;636 529;530 529 2 9606 Homo sapiens -0.018484971393831984 AAVIGDVIR Unmodified 912.53927 0.53926584 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 6.5 0.5 1 1 50.275 50.354 2 0.00048182 13723 20230619_1887_Aki_TMTPro18x_K_F7 153.71 68.446 905340 789060 832140 883410 769780 945270 892050 933540 1036400 763920 620470 546190 776570 560370 755030 847390 756650 594280 836930 723100 850870 885510 808880 950820 896830 949830 1030800 775040 662740 565630 786160 593030 768670 832540 722810 567730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1776899999.9999998 350 1748 334 637;638 531 531 1 9606 Homo sapiens 0.07949777651435852 AAVIGLTK Unmodified 771.48544 0.48543935 4445 Q9BUT1;D6R9P2;Q9BUT1-3 BDH2;SLC9B2 3-hydroxybutyrate dehydrogenase type 2 yes no 0 0 0 3 0 1 50.301 50.376 2 0.0074893 14292 20230619_1882_Aki_TMTPro18x_K_F3 114.93 25.634 224960 182750 193550 226990 415450 464550 313110 300480 408710 325290 356600 380130 355990 323210 343660 396770 457270 407260 207770 167680 202810 228480 411520 447890 324310 318800 408790 329440 368460 381510 363080 339050 356210 397970 436070 386890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191850000 351 4445 335 639 532 532 1 9606 Homo sapiens 0.09055605219703011 AAVLESLLR Acetyl (Protein N-term) 1012.5917 0.59169534 1353 A0A2R8Y5C2;Q8IWY9-1;Q8IWY9 CDAN1 Codanin-1 yes no 1 0 0 6 0 1 67.921 67.964 2 9.9104E-05 21522 20230619_1886_Aki_TMTPro18x_K_F6 107.9 98.308 2990.8 2256.8 2558 2138.2 2545.5 2415.2 2857 3657.7 3461.5 1856.5 1846 1705.4 2455.4 939.94 2683.4 2190 1619 1110 2760.9 2066.4 2631.3 2177.3 2652.1 2451.5 2882.5 3598.9 3423.2 1968.1 1997 1715.5 2489.1 1064.4 2662.9 2121.9 1555.9 1067.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1912500 352 1353 336 640 533 533 1 9606 Homo sapiens 0.08590315994376851 AAVLFATDIAAR Unmodified 1217.6768 0.67682195 1766 B4DKX3;A0A8I5KSH6;Q13206;A0A8I5KQZ1;A0A3B3ISR7;Q86VR6;E9PIF2;Q59EC7;A0A8I5KXY1;A0A8I5KPM1;A0A8I5KUU7 DDX10 Probable ATP-dependent RNA helicase DDX10 yes no 0 0 0 1 0 1 59.992 59.992 2 0.01504 18490 20230619_1880_Aki_TMTPro18x_K_F1 83.862 57.743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 353 1766 337 641 534 534 1 9606 Homo sapiens 0.07669061460160265 AAVLLEQER Unmodified 1027.5662 0.56620887 3850 Q13435;Q7Z3K9;E9PJ04;H0YCG1;E9PJT3 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 0 3.5 0.5 1 1 46.748 46.808 2 0.040285 12544 20230619_1883_Aki_TMTPro18x_K_F4 68.846 47.571 63954 45541 60568 62955 64071 68498 68814 71042 98187 61724 71833 66075 69158 63707 67979 69693 69806 63010 59063 41856 61874 62216 66443 68890 70001 72148 97174 63092 74781 66848 70657 66073 69255 69575 66726 59943 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121720000 354 3850 338 642;643 535 535 1 9606 Homo sapiens 0.05352841471949432 AAVLQQVLER Acetyl (Protein N-term) 1167.6612 0.66117189 3440 P12270;P12270-2;Q58F23;Q504U6 TPR Nucleoprotein TPR yes no 1 0 0 5 0.816 1 1 1 65.203 65.236 2 5.7749E-20 20249 20230619_1885_Aki_TMTPro18x_K_F5 180.45 119.77 7279.5 6636.3 7968.3 5124.8 9659.7 8508.2 7056.3 7351.3 10149 8721 11622 12573 9863.9 9714.3 10216 10297 9069.8 9270 6741.2 6063.4 8040.9 5357.3 9817.4 8333.4 7366.8 7337.3 10216 8860.8 11784 12488 10145 10133 10320 10284 8690.3 8814.8 3 3 3 3 3 3 3 2 3 3 3 3 3 3 3 3 3 3 299670000 355 3440 339 644;645;646 536;537;538 537 3 9606 Homo sapiens 0.08404774943142002 AAVMVYDDANK Oxidation (M) 1211.5492 0.54923818 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A075B6E5 ENAH Protein enabled homolog yes no 0 1 0 3.5 0.5 1 1 45.599 45.659 3 1.6091E-05 12016 20230619_1883_Aki_TMTPro18x_K_F4 140.17 119.3 90065 62543 72317 85042 91412 108050 96483 89873 125440 99760 113710 133110 119470 95088 87042 137690 134910 125190 83066 57479 75318 84287 93725 107060 97830 93364 125590 101360 117550 132330 120230 101560 92000 136820 128550 119070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121010000 356 918 340 647;648 539 539 526 1 9606 Homo sapiens -0.048074471961854215 AAVPDAVGK Unmodified 826.45487 0.45486751 3387;959 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z1Q9;B7Z3F8;B3KV59;B3KSY7;P05023;P05023-4;P05023-3;B7Z3V1;P05023-2;B3KRI1;B2RAQ4;P50993;B1AKY9;A0A0S2Z3W6;B7Z1N5;H0Y7C1;B3KX35;B3KW93;B4DIQ8 ATP1A3;ATP1A1;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2 no no 0 0 0 5.5 0.5 1 1 43.344 43.431 2 0.00016205 10998 20230619_1885_Aki_TMTPro18x_K_F5 145.63 102.63 204460 121430 235170 272500 297830 375660 284750 340790 393080 313950 391260 502160 449920 433650 324740 297790 621510 651800 188970 112480 237590 263760 304530 370770 291310 349680 393980 324620 404650 498310 452050 442630 348580 321310 592000 615220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 187120000 357 959;3387 341 649;650 540;541 540 2 9606 Homo sapiens 0.034698268346687655 AAVPELLQQQEEDR Acetyl (Protein N-term) 1666.8162 0.81622856 4752 Q9Y5X3;Q5QPE4;Q5QPE5;U3KQL0;U3KQP5;A0A0S2Z5F1;Q9Y5X3-2 SNX5 Sorting nexin-5 yes no 1 0 0 1 0 1 60.936 60.936 2 7.8471E-17 18881 20230619_1880_Aki_TMTPro18x_K_F1 192.38 180.33 51067 48452 51970 45992 49907 54920 54792 54476 67470 27426 23165 19866 26608 19168 38312 22484 24709 25225 47274 44327 52650 46822 52145 54874 55335 54956 66132 29012 26014 20515 27588 20002 37913 22745 23776 23928 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144790000 358 4752 342 651 542 542 1 9606 Homo sapiens 0.00949309496263595 AAVPSGASTGIYEALELR Unmodified 1803.9367 0.93667805 293;3418;3448 Q6FHV6;P09104;A8K3B0;P09104-2;F5H0C8;F5H1C3;E5RI09;E5RG95;A0A024R4F1;P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8Y798;A0A2R8YEG5;P13929-3;P13929-2;P13929;K7EPM1;K7EKN2;B4DUJ6;E5RGZ4 ENO2;ENO3;ENO1 Gamma-enolase;Enolase;Alpha-enolase;Beta-enolase no no 0 0 0 6.5 0.957 1 2 2 1 61.358 61.403 2;3 6.705900000000001E-24 18395 20230619_1888_Aki_TMTPro18x_K_F8 204.13 182.6 642300 522950 625620 665660 569740 672940 683030 699150 728820 820590 781550 826500 799110 931780 517880 1154100 485080 961640 593770 479960 636380 660660 599590 680420 683800 715670 742540 823010 800070 842900 803190 967960 533600 1143500 467740 913660 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 37019000000 359 3418;293;3448 343 652;653;654;655;656;657 543;544;545;546 546 4 9606 Homo sapiens 0.06686717489856164 AAVPSGASTGIYEALELRDGDK Unmodified 2219.107 0.10699085 3418;3448 Q6FHV6;P09104;A8K3B0;P09104-2;F5H0C8;F5H1C3;E5RI09;E5RG95;P13929-3;P13929-2;P13929;K7EPM1;K7EKN2;B4DUJ6;E5RGZ4 ENO2;ENO3 Gamma-enolase;Enolase;Beta-enolase no no 0 0 1 6 0 1 57.575 57.644 3 4.6251E-23 17173 20230619_1886_Aki_TMTPro18x_K_F6 171.47 157 31261 34052 32828 28391 18846 23607 22241 25258 22494 35706 31398 33855 42152 32942 40766 50640 50693 49399 28978 31111 32973 29126 20790 24305 22287 25968 23329 35443 32296 34443 42606 34963 42078 50496 48398 46937 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95326000 360 3418;3448 344 658 547 547 1 9606 Homo sapiens 0.04620163630852403 AAVPSGASTGIYEALELRDNDK Unmodified 2276.1285 0.12845458 293 A0A024R4F1;P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8Y798;A0A2R8YEG5 ENO1 Alpha-enolase;Enolase yes no 0 0 1 5.5 0.5 1 1 57.247 57.313 3 1.8276E-37 16765 20230619_1885_Aki_TMTPro18x_K_F5 225.83 49.352 355460 406700 351800 286510 334280 341060 303350 324540 329110 389210 362490 337510 441400 341720 357060 578390 504820 445430 329470 371130 356900 300650 347590 340990 308780 334260 335680 388240 373590 345710 443950 364870 373930 569240 481170 424700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1079000000 361 293 345 659;660 548;549 548 2 9606 Homo sapiens 0.041435486595673865 AAVPSIK Unmodified 684.41703 0.41702544 3374 V9HWF4;P00558;P00558-2;B4DHB3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 8 0 1 44.932 44.96 2 0.043032 11488 20230619_1888_Aki_TMTPro18x_K_F8 89.369 33.766 130260 103630 127640 128820 150600 165400 156740 148610 181010 158220 192110 189010 193960 169710 177650 174350 208300 208000 120410 95099 130240 128510 154790 164090 158410 153240 183370 160390 196640 189850 197170 175960 182600 177040 199010 197200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37476000 362 3374 346 661 550 550 1 9606 Homo sapiens 0.062193606398523116 AAVQAAEVK Acetyl (Protein N-term) 927.50255 0.50254598 3911 Q15046;Q6ZTI3;H3BRC9 KARS Lysine--tRNA ligase yes no 1 0 0 2 0 1 46.283 46.362 2 5.106E-07 12756 20230619_1881_Aki_TMTPro18x_K_F2 89.298 79.711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 363 3911 347 662 551 551 1 9606 Homo sapiens 0.03589481034839537 AAVTPGK Unmodified 642.37008 0.37007525 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;A0A7I2V2S8 NCL Nucleolin yes no 0 0 0 7.5 0.5 1 1 36.722 36.75 2 0.013271 8181 20230619_1888_Aki_TMTPro18x_K_F8 114.19 30.385 35529 14623 53330 45978 81055 80917 51283 84658 52585 22996 60675 80158 36954 53383 68362 17970 74387 67143 32887 13675 53046 44273 81082 79178 53590 84468 53675 28268 61024 77800 40117 54000 69005 21555 71064 63278 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36958000 364 1658 348 663;664 552 552 1 9606 Homo sapiens 0.034585010887212775 AAVTSLFAK Unmodified 906.51747 0.51746776 2797 CON__Q3SX09 yes yes 0 0 0 3.5 0.5 1 1 56.785 56.806 2;3 6.9498E-05 16955 20230619_1883_Aki_TMTPro18x_K_F4 178.83 91.508 + 90533 117520 141220 117780 279610 341940 209510 203280 335830 155750 216330 196630 100750 127010 417390 155220 203470 184580 84408 107460 141260 121810 277980 325470 218960 215780 329490 161680 222920 195500 121710 134620 405600 158010 196620 175070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 439450000 365 2797 349 665;666 553;554 554 2 9606 Homo sapiens 0.06046972902845482 AAVVESHK Unmodified 839.45012 0.45011648 3371 V9HW90;P00390-2;P00390-3;P00390;P00390-5;P00390-4;A0A2R8YF59;H0YC68 HEL-75;GSR Glutathione reductase, mitochondrial yes no 0 0 0 5 0 1 34.125 34.21 3 0.001462 7251 20230619_1885_Aki_TMTPro18x_K_F5 114.28 91.452 36466 21453 45042 43595 77813 68861 51339 67440 49042 31132 54414 53624 28982 37582 50177 24894 54499 44036 33725 19839 45500 42504 77350 67668 53281 67960 50227 34087 54494 52879 31485 38574 50744 26382 52030 41661 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38886000 366 3371 350 667 555 555 1 9606 Homo sapiens 0.02396942691905224 AAWEAYLSR Unmodified 1065.5243 0.52434406 2076 A8K5J1;P11172;P11172-3;B5LY64;B5LY69;P11172-2;B5LY70;P11172-4 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase;Orotidine 5'-phosphate decarboxylase yes no 0 0 0 8 0 1 55.851 55.913 2 0.0039913 16098 20230619_1888_Aki_TMTPro18x_K_F8 96.034 74.527 163640 144840 149660 150730 164910 204750 172970 172390 224790 112170 107150 100430 103180 86646 137190 111420 114190 101420 151280 132640 153460 152510 170600 202180 175450 176710 221030 116480 115330 102110 107090 91146 137490 111100 109390 96486 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63004000 367 2076 351 668 556 556 1 9606 Homo sapiens -0.005797142165874902 AAWEVDSGRR Unmodified 1145.5578 0.55776945 1063 P11310-2;P11310;Q5HYG7;Q5T4U5;A0A0S2Z366;B4DWX6;B7Z9I1;F6YB23;A0A7P0T932;A0A7P0T8G6;B4DJE7;A0A7P0TB55;B4DVB1;B4DVE0 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 1 4.5 0.5 1 1 36.166 36.235 3 7.7268E-06 7955 20230619_1885_Aki_TMTPro18x_K_F5 153.97 125.16 67800 51375 66109 66599 95979 101640 82172 93867 103240 80378 88962 86765 92884 67992 85337 75505 97936 84366 62651 47174 67745 66461 96962 99924 84310 95993 103370 82180 92100 87158 94254 71215 87539 76290 93489 80087 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202940000 368 1063 352 669;670 557 557 1 9606 Homo sapiens -0.009187124446725647 AAWIPHVENR Unmodified 1191.6149 0.6148904 3446 P13521;B4DQJ6 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 8 0 1 44.872 44.9 3 0.030072 11398 20230619_1888_Aki_TMTPro18x_K_F8 55.721 42.954 57876 45428 47733 54991 42294 47047 58645 60001 54090 53962 52939 51100 56340 44852 45706 53950 60547 55958 53425 41678 49301 54662 44803 48476 58051 60246 55320 54744 54505 51807 56882 46977 47525 54158 57755 53145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132690000 369 3446 353 671 558 558 1 9606 Homo sapiens 0.026747548317189285 AAYAGGLVLDPK Unmodified 1173.6394 0.63937381 1981 P09884;A6NMQ1 POLA1 DNA polymerase alpha catalytic subunit;DNA polymerase yes no 0 0 0 8 0 1 55.285 55.347 3 0.00015002 15889 20230619_1888_Aki_TMTPro18x_K_F8 104.52 79.306 44243 37992 38664 47863 38337 48215 49156 41467 56158 54507 49882 48216 55877 48817 44254 58352 63534 50389 40880 34858 39804 47511 40201 48563 49125 43209 56578 54222 51716 49259 56320 50830 46340 58003 60511 47993 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38553000 370 1981 354 672 559 559 1 9606 Homo sapiens 0.059499701945469496 AAYEAELGDAR Unmodified 1164.5411 0.54111633 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;Q8N519;A0A6Q8PF80;A0A6Q8PGH0;A0A6Q8PF59;A0A6Q8PFM1;W5X314 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 1.5 0.5 1 1 43.237 43.278 2 1.5467E-08 11521 20230619_1880_Aki_TMTPro18x_K_F1 200.56 180.23 815480 558040 645900 913070 1059700 1315800 1247800 1180300 1591800 1200400 1256400 1474800 1426100 1175400 1131100 1459900 1364600 1504600 751980 514040 678680 897100 1075000 1295800 1256400 1215600 1587600 1221300 1313400 1474200 1436200 1237400 1170100 1464100 1304400 1428100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1820399999.9999998 371 1428 355 673;674 560;561;562 561 3 9606 Homo sapiens -0.034572581212842124 AAYFGIYDTAK Unmodified 1218.5921 0.59208927 3388 P05141;Q6NVC0 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes no 0 0 0 1 0 1 57.28 57.28 3 3.0189E-06 17383 20230619_1880_Aki_TMTPro18x_K_F1 145.89 88.867 179220 131720 160210 173680 166930 169720 208400 203060 219180 142550 128780 104920 138510 109690 162090 151450 130570 106030 165470 120980 164520 171920 173870 172680 207960 203530 218850 146270 136750 108580 142130 115200 162600 149030 125060 101280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 468050000 372 3388 356 675 563 563 1 9606 Homo sapiens -0.008463090764280423 AAYFGVYDTAK Unmodified 1204.5764 0.57643921 3439;1072 A0A0S2Z3H3;P12235;A8K787;V9GYG0;A0A0S2Z3C4;Q59EP7;P12236;Q6I9V5;Q59EI9 SLC25A4;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 0 0 6.2 2.64 1 2 2 54.808 54.86 2;3 1.7845E-09 15693 20230619_1887_Aki_TMTPro18x_K_F7 226.47 178.18 595970 525970 537810 613810 574590 621730 630000 640980 703470 606270 562410 576280 650250 518940 584580 676100 618350 597470 550900 482170 552170 612850 595480 628670 634250 652590 706880 613780 587670 584600 657600 545580 597960 672260 591170 568390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1778799999.9999998 373 1072;3439 357 676;677;678;679;680 564;565;566 565 3 9606 Homo sapiens -0.017665955934717203 AAYLSDPR Unmodified 891.44503 0.4450311 3758 P78527;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5.5 0.5 1 1 40.009 40.097 2 0.0018634 9549 20230619_1886_Aki_TMTPro18x_K_F6 135.87 94.363 118670 101580 111170 123610 134870 142590 133080 129640 159850 145150 164600 152940 158250 137870 134040 158370 178850 155790 109700 93173 113980 123260 138170 142470 135100 133750 161470 146150 168260 154460 160620 143770 139330 158610 170530 148080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144400000 374 3758 358 681;682 567;568 568 2 9606 Homo sapiens -0.005033611707176533 AAYNPGQAVPWNAVK Unmodified 1584.8049 0.80487601 2414 B3KTJ9;Q8N163-2;Q8N163;H0YC69;E5RFJ3;H0YC58;E5RGU7 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 3 0 1 56.308 56.345 3 2.5568E-06 16891 20230619_1882_Aki_TMTPro18x_K_F3 119.39 100.06 98510 81820 84407 84726 95365 127300 99953 99585 114950 67470 60047 51148 64117 53043 78825 71651 63691 57272 90990 74943 87112 85908 98541 124820 100940 102760 113950 69533 64360 52814 66013 55639 79019 70929 61041 54573 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 312670000 375 2414 359 683 569 569 1 9606 Homo sapiens 0.0358657698341176 AAYNQVK Unmodified 792.413 0.41300269 3492 P22695;H3BRG4 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 8 0 1 38.101 38.086 2 0.005874 8714 20230619_1888_Aki_TMTPro18x_K_F8 137.44 91.722 47051 28090 64482 56124 137870 152270 86589 115980 124910 12642 13720 12304 13567 12852 32718 13146 19938 14084 43567 25968 65110 55561 136060 145730 91415 118040 120350 18530 19331 12626 14821 13252 32116 13322 19160 13389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20921000 376 3492 360 684 570 570 1 9606 Homo sapiens 0.00849271146148567 AAYPDLENPPLLVTPSQQAK Unmodified 2151.1212 0.12118435 3650 P54136;P54136-2;E5RJM9 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 61.344 61.379 3 0.0050371 18335 20230619_1888_Aki_TMTPro18x_K_F8 64.83 55.172 515820 432660 513650 560800 496660 524220 577950 543760 539160 605620 577250 565130 643970 513740 624770 663990 609080 632730 477020 397120 521980 555330 518980 533390 576940 556020 553470 607310 593500 573960 653920 539760 635000 662990 583080 601220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 576010000 377 3650 361 685;686 571;572 572 2 9606 Homo sapiens 0.09166860849745717 ACADATLSQITNNIDPVGR Unmodified 2014.9742 0.97420254 1179 B2R6K4;A0A140VJJ8;P62873;A0A2L0WW42;P62873-2;F6UT28;A0A994J6X8;B1AKQ8 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes no 0 0 0 6.5 0.5 1 1 60.504 60.554 3 2.2043E-31 18335 20230619_1886_Aki_TMTPro18x_K_F6 232.78 192.26 64682 56172 77765 88402 54513 66589 69621 78489 73604 80521 81025 81058 89566 82832 75459 86323 83573 94722 59933 51668 77624 86307 58876 69214 69527 79437 75092 81259 83151 82332 90513 85560 77491 87135 79961 89838 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 475820000 378 1179 362 687;688 573;574 573 2 9606 Homo sapiens 0.007314406931527628 ACAEALR Unmodified 789.38032 0.38032236 3004 G3V1B8;H0YEB6;O60232 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 yes no 0 0 0 3.5 0.5 1 1 33.453 33.512 2 0.040071 6977 20230619_1882_Aki_TMTPro18x_K_F3 90.706 25.903 44763 24678 58738 77728 82878 82022 71590 85418 75389 35881 58029 61339 43826 41945 69825 28128 66838 44322 41414 23036 58976 74056 83751 82591 72977 85698 75736 39719 59812 60452 46455 43155 70135 29543 63823 42008 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45452000 379 3004 363 689;690 575 575 1 9606 Homo sapiens -0.022792592483710905 ACAEIAAQR Unmodified 988.47601 0.47601366 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;X6RE05 UBR4 E3 ubiquitin-protein ligase UBR4 no no 0 0 0 4 0 1 34.733 34.783 2 0.002858 7461 20230619_1883_Aki_TMTPro18x_K_F4 102.51 77.591 28875 17875 30662 37082 38240 43216 34834 35155 41411 36845 42289 45101 43869 38174 36596 32968 46971 47616 26673 16532 31152 35898 39041 43013 35527 36525 41843 37413 43427 45145 44389 39347 37891 34049 44846 45069 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23394000 380 4061 364 691 576 576 1 9606 Homo sapiens -0.018685311281160466 ACAELHQNVNVK Unmodified 1381.6772 0.67723266 4389 Q96QK1;Q53FR4;Q5HYM2 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 6.5 0.5 1 1 38.997 39.07 3 9.9308E-10 8879 20230619_1887_Aki_TMTPro18x_K_F7 174.24 137.96 65315 43379 58035 71187 65339 103480 70790 72500 131690 98619 110720 163960 165810 150880 81994 210770 249020 318360 60268 39965 59791 69935 67832 101350 72901 76920 129810 100400 117220 163060 163800 159340 94794 216350 237130 300980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162950000 381 4389 365 692;693 577 577 1 9606 Homo sapiens 0.0016611311771157489 ACANPAAGSVILLENLR Unmodified 1767.9302 0.93015288 3374 V9HWF4;P00558;P00558-2 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 1.5 0.5 1 1 62.079 62.084 3 5.4147E-30 19285 20230619_1880_Aki_TMTPro18x_K_F1 224.06 189.76 248580 213940 241950 258530 217250 264760 262670 264240 306790 257320 231860 223300 268970 212600 276340 308760 292240 292630 229870 196210 246100 257540 229090 267190 263590 269810 307000 259490 243070 228060 273650 224850 281930 307700 279460 278110 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3305199999.9999995 382 3374 366 694;695 578;579;580 578 3 9606 Homo sapiens 0.07690501057481924 ACCPLEGVRPSPQQTEYR Unmodified 2146.9888 0.98880675 2954 F2Z2W7;Q8IZ69;Q8IZ69-2 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes no 0 0 1 7 0 1 41.646 41.717 3 2.1514E-06 9996 20230619_1887_Aki_TMTPro18x_K_F7 104.76 94.13 21822 14919 17500 23312 22249 23093 22939 20250 21154 21321 20851 22034 25524 17908 22730 27468 23847 21965 20124 13734 18242 22828 22744 23298 23026 20930 21655 21511 21625 22206 25744 19122 23250 27127 22792 20927 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45866000 383 2954 367 696 581 581 1 9606 Homo sapiens -0.03880810430337078 ACDESVLMDLK Unmodified 1279.5788 0.57882375 2396 B3KRK2;Q53HI2;Q9UJV9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes no 0 0 0 3 0 1 58.828 58.858 3 0.0060618 17939 20230619_1882_Aki_TMTPro18x_K_F3 70.488 35.739 23842 34718 25248 25871 19639 32585 27559 26390 31478 29981 26118 27152 31271 25108 32095 33723 27310 32903 22165 31674 25466 26980 21140 32310 27449 27483 31640 30032 27293 27627 31778 26434 32369 33698 26215 31239 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26209000 384 2396 368 697 582 582 1 9606 Homo sapiens -0.04978251242346232 ACEFAGFQCQIQFGPHNEQK Unmodified 2395.0474 0.047384258 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 7.5 0.5 1 1 54.962 55.027 3 4.295E-08 15753 20230619_1887_Aki_TMTPro18x_K_F7 112.74 88.937 41489 35552 38573 42917 33405 36247 43726 40801 38862 51129 47514 51888 55888 48400 44789 61630 58827 59849 38353 32605 39376 42658 35363 37276 43352 41665 40275 51113 48738 52521 56264 50736 46608 61568 56157 56860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 300660000 385 1292 369 698;699 583 583 1 9606 Homo sapiens -0.0943375385586478 ACFCDDHTR Unmodified 1180.439 0.43897622 2474 D6RBR7;B4DFG9;Q9Y3S2;Q53EN0 ZNF330 Zinc finger protein 330 yes no 0 0 0 2.5 0.5 1 1 31.137 31.212 3 9.6937E-09 6178 20230619_1881_Aki_TMTPro18x_K_F2 205.12 187.3 57787 38668 50109 56564 69509 76731 66251 59274 82484 63480 71449 69573 71043 59400 62777 65974 85995 81459 53315 35573 51876 55873 70621 75638 67448 61888 82615 64176 73785 70013 72151 61986 65275 67048 82023 77223 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 70409000 386 2474 370 700;701 584;585 584 2 9606 Homo sapiens -0.14402570736206144 ACFHCETCK Unmodified 1211.4522 0.45218344 157 A0A024R1S8;Q14847;A8K1D2;Q14847-2;B4DIC4;B4DJI4;F6S2S5;K7ESD6 LASP1 LIM and SH3 domain protein 1 yes no 0 0 0 6 0.816 1 1 1 35.52 35.591 3 0.001822 7834 20230619_1886_Aki_TMTPro18x_K_F6 91.584 89.761 178540 129120 165860 158010 251910 281100 229220 223270 298170 106180 123520 113010 119800 96403 161490 103520 133660 103930 164880 118520 170820 158800 254410 273500 234330 228870 292280 114210 134820 113990 124390 100390 161610 104140 127950 98817 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157900000 387 157 371 702;703;704 586;587 587 2 9606 Homo sapiens -0.14508455948475785 ACFTMDPK Oxidation (M) 984.40449 0.4044882 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;P26640-2 VARS Valine--tRNA ligase yes no 0 1 0 6 0 1 42.737 42.831 3 0.0076981 10704 20230619_1886_Aki_TMTPro18x_K_F6 75.213 69.897 53902 40816 50043 56162 54766 55019 60048 56100 63550 57753 67338 58990 62459 52736 57797 73931 71257 61052 49789 37502 51261 55429 56613 55752 60344 57304 64663 58324 68639 59692 63690 55705 59684 73186 67978 58161 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80449000 388 725 372 705 588 588 434 1 9606 Homo sapiens -0.08833786877005423 ACFTMDPK Unmodified 968.40957 0.40957357 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;P26640-2 VARS Valine--tRNA ligase yes no 0 0 0 6.5 0.5 1 1 48.791 48.873 2 0.0013285 13065 20230619_1887_Aki_TMTPro18x_K_F7 144.38 118.3 203870 165830 179670 200320 182910 213070 199920 205090 225840 256260 238480 233890 278270 208130 213890 301520 302970 242830 188320 152120 184710 199640 190360 214310 201450 211410 229350 255510 245730 237680 279590 220540 224010 297950 288610 231480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 179870000 389 725 372 706;707 589;590 590 2 9606 Homo sapiens -0.07589483014396592 ACFYNLDK Unmodified 1029.459 0.45896661 4084 Q5W009;Q96I25 RBM17 Splicing factor 45 yes no 0 0 0 7.5 0.5 1 1 51.91 51.985 2 0.0016112 14382 20230619_1888_Aki_TMTPro18x_K_F8 139.88 109.89 188060 147720 164190 174930 188910 222350 209310 201150 239060 152380 139590 120630 140720 116430 154100 170450 159450 134880 173670 135490 169250 175060 195010 220710 210670 205630 237660 155840 147890 123950 144270 123090 156840 168390 152340 128580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103030000 390 4084 373 708;709 591 591 1 9606 Homo sapiens -0.05458451733943548 ACGDSTLTQITAGLDPVGR Unmodified 1930.9418 0.94183978 3730 Q6FHM2;P62879;C9JIS1;C9JXA5;C9JZN1 GNB2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes no 0 0 0 6.5 0.5 2 2 61.127 61.174 2;3 5.596E-61 18636 20230619_1886_Aki_TMTPro18x_K_F6 314.17 283.97 186990 145400 179010 199230 140710 159970 171910 193610 181400 300850 337200 395250 379820 333130 244260 366770 352830 467080 172790 133580 182050 196260 150060 165510 172090 198360 190900 300880 340700 394630 379910 347520 257470 373240 337330 442150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1463899999.9999998 391 3730 374 710;711;712;713 592;593;594 593 3 9606 Homo sapiens 0.013606532901121682 ACGLVASNLNLK Acetyl (Protein N-term) 1300.6809 0.68092105 1431 A0A384MR27;P09382;F8WEI7 LGALS1 Galectin-1 yes no 1 0 0 4.5 3.5 1 1 61.949 61.963 2 2.5742E-09 19260 20230619_1880_Aki_TMTPro18x_K_F1 141.2 121.92 467100 340270 347820 487990 395800 601740 556050 663510 983280 631340 450210 711190 1046400 867270 306400 1517300 1192400 1428500 430710 312840 365160 481880 414060 600530 563980 672210 955970 643250 513790 724930 1015200 923840 380270 1505100 1134000 1356900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1768699999.9999998 392 1431 375 714;715 595;596 595 2 9606 Homo sapiens 0.04260782891560666 ACGLVASNLNLKPGECLR Acetyl (Protein N-term) 2013.0136 0.013564934 1431 A0A384MR27;P09382;F8WEI7 LGALS1 Galectin-1 yes no 1 0 1 4.5 3.5 1 1 58.714 58.735 2;3 2.432E-19 17293 20230619_1888_Aki_TMTPro18x_K_F8 122.42 103.18 54393 44051 55963 56084 74669 73423 81044 79126 80686 70464 62435 56103 69286 51176 66576 69180 52672 48439 50304 40430 57008 55891 76147 73070 81297 80173 81503 71243 65195 57476 70301 53920 66994 68074 50501 46242 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5491900000 393 1431 376 716;717 597;598 598 2 9606 Homo sapiens 0.047578694430285395 ACGNFGIPCELR Unmodified 1392.6278 0.62783962 3489 P22234;P22234-2;E9PBS1;D6RF62 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 7 0.816 1 1 1 52.442 52.518 2 1.033E-12 14668 20230619_1887_Aki_TMTPro18x_K_F7 203.78 164.97 468550 382200 412890 438280 371440 440130 414080 411420 442330 542100 508760 542200 578630 508300 491260 646510 580820 601320 432820 350410 423570 438140 390620 444330 416150 425860 452280 540730 522120 549280 584350 532630 506900 644480 555000 571540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2552000000 394 3489 377 718;719;720 599;600 599 2 9606 Homo sapiens -0.052769181627354556 ACGQIFCGK Unmodified 1039.4579 0.45792075 1103 O14964;A0A7I2V3F9;A0A7I2V5A3;A0A7I2V3Z1;A0A7I2V6E0;A0A7I2V2K2;A0A7I2V5A2;A0A7I2V3I8;A0A7I2V2D8;A0A7I2V2W5;A0A7I2V2R9;A0A7I2V3J3;A0A0S2Z4R4;A0A7I2V637;B4E1E2;A0A0S2Z4Q4;O14964-2;A0A7I2YQD1;A0A7I2V307;I3L1P5;B4DFP5;A0A7I2V5N3;A0A7I2V5W6;A0A7I2V5X2 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 2 0 1 46.678 46.758 2 6.0492E-06 12940 20230619_1881_Aki_TMTPro18x_K_F2 150.84 83.805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 395 1103 378 721 601 601 1 9606 Homo sapiens -0.06022989374491772 ACGVDYEVK Unmodified 1039.4644 0.46444592 2004 P49407;P49407-2;A8K103;E9PM35 ARRB1 Beta-arrestin-1 yes no 0 0 0 4 0 1 44.726 44.771 2 5.3914E-07 11616 20230619_1883_Aki_TMTPro18x_K_F4 150.24 94.86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 396 2004 379 722 602 602 1 9606 Homo sapiens -0.05370772942114854 ACGVSRPVIACSVTIK Unmodified 1716.9015 0.90149529 1527 A0A3B3IUA2;Q6FHM6;B1AHD1;P55769;A0A3B3IRU2 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 0 0 1 4.5 0.5 1 1 47.043 47.103 3 4.0114E-11 12504 20230619_1885_Aki_TMTPro18x_K_F5 158.64 118.62 403070 386670 376860 436330 394800 421840 441230 446950 431970 463530 410450 373110 470780 355140 392770 464900 456010 391990 372910 354260 385630 436480 409730 428410 441980 455310 440140 464690 424530 382440 474610 372930 404630 461160 435260 373320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 720550000 397 1527 380 723;724 603 603 1 9606 Homo sapiens 0.07172060156676707 ACIGDTLCQK Unmodified 1164.5267 0.5267286 1889 A1LT96;A0AVT1;B3KSS1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 0 7 0 1 46.772 46.86 2 2.2847E-16 12125 20230619_1887_Aki_TMTPro18x_K_F7 191.85 162.04 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 398 1889 381 725 604 604 1 9606 Homo sapiens -0.048953698654258915 ACILCVHPR Unmodified 1124.5583 0.5583035 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 0 3 0 1 40.137 40.194 3 9.8967E-07 9666 20230619_1882_Aki_TMTPro18x_K_F3 159.04 127.03 58200 47556 53124 58793 63704 68835 61851 65177 75118 64001 51263 60678 60984 53293 62933 66995 68760 58380 53777 43632 54578 58579 65302 68762 62873 66789 74850 64665 54229 61469 62059 55925 64298 66618 65661 55579 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113360000 399 1532 382 726 605 605 1 9606 Homo sapiens 0.0010066767918033293 ACIPVGLLGK Unmodified 1026.5896 0.58958685 2338 B7Z6D5;B3GQE6;Q96GQ7;A0A087X059 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 0 0 4 0 1 59.683 59.685 3 0.0011979 18209 20230619_1883_Aki_TMTPro18x_K_F4 92.062 57.342 39736 29584 34794 38343 38581 43304 41002 44210 41115 44576 40035 38644 45958 37935 37239 58000 47778 50966 36684 27167 35835 38065 39850 43426 41217 45094 41878 44839 41375 39520 46309 40218 38720 57499 45633 48471 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64278000 400 2338 383 727 606 606 1 9606 Homo sapiens 0.07735563984920191 ACLDTAVENMPSLK Oxidation (M) 1563.7273 0.7272789 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 1 0 5.5 0.5 1 1 50.97 51.046 3 0.028291 14158 20230619_1885_Aki_TMTPro18x_K_F5 47.189 27.611 55498 45849 55352 55807 49365 49057 53293 55260 63695 75649 71028 60332 75131 58163 61786 75801 71500 72013 51319 42058 56140 55474 51825 50290 53865 56562 64664 74872 72621 61901 75876 61043 63677 75634 68320 68437 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 324330000 401 3606 384 728;729 607 607 2275 1 9606 Homo sapiens -0.03203565059311586 ACLDTAVENMPSLK Unmodified 1547.7324 0.73236428 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 6.5 0.5 1 1 58.789 58.847 3 1.1389E-08 17298 20230619_1887_Aki_TMTPro18x_K_F7 152.32 122.34 134240 106580 132010 138400 86626 86154 114140 118370 94782 245520 234280 238740 276790 219460 181020 284300 278520 282750 124090 97849 133610 136520 94170 91898 113120 122130 103840 240790 235580 241980 276500 230540 191710 284230 265570 268560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 937210000 402 3606 384 730;731 608 608 1 9606 Homo sapiens -0.01959261196702755 ACLDYPVTSVLPPASLCK Unmodified 1989.9904 0.99036988 2012 A8MZH8;A8MXQ1;A8K274;P53801 PTTG1IP Pituitary tumor-transforming gene 1 protein-interacting protein yes no 0 0 0 2 0 1 62.46 62.469 3 0.0012352 19714 20230619_1881_Aki_TMTPro18x_K_F2 74.772 62.389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 403 2012 385 732 609 609 1 9606 Homo sapiens 0.03497430605716545 ACLISLGYDIGNDPQGEAEFAR Unmodified 2395.1114 0.1114243 387 P12814;A0A024R694;A0A804HL31 ACTN1 Alpha-actinin-1 yes no 0 0 0 5 0 1 62.71 62.757 3 2.8409E-08 19183 20230619_1885_Aki_TMTPro18x_K_F5 105.32 102.17 65690 48475 64276 59095 78639 67640 69951 61067 84259 62520 70345 64599 74488 67504 71077 70423 75196 71856 60694 44487 65567 58938 80183 67658 71456 62908 84423 63241 72978 65622 75766 69676 72557 70815 71884 68246 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91462000 404 387 386 733 610 610 1 9606 Homo sapiens -0.030326952179166256 ACLISLGYDVENDRQGEAEFNR Unmodified 2555.1711 0.17106445 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;Q96BG6;O43707-2;O43707-3;A0A0S2Z3X3 ACTN4 Alpha-actinin-4 yes no 0 0 1 3.5 0.5 1 1 57.823 57.84 3 4.424E-17 17420 20230619_1883_Aki_TMTPro18x_K_F4 159.44 130.79 29653 27023 25861 28309 24453 25004 29853 29404 32525 30321 32845 26593 36163 25965 33062 33272 32288 29689 27410 24746 26578 28459 25648 25656 29873 29764 32989 30481 33789 27178 36618 27213 33631 33119 30883 28246 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40843000 405 1069 387 734;735 611 611 1 9606 Homo sapiens -0.04431424274571327 ACNCLLLK Unmodified 990.49906 0.49905728 3418;3448 Q6FHV6;P09104;A8K3B0;P09104-2;F5H0C8;Q9NPL4;U3KQQ1;P13929-3;P13929-2;P13929;D3DTL4 ENO2;ENO3 Gamma-enolase;Enolase;Beta-enolase no no 0 0 0 2 0 1 50.742 50.794 2 0.0021011 14775 20230619_1881_Aki_TMTPro18x_K_F2 148.33 80.1 253680 207450 206530 236120 193030 205400 225040 187560 267340 133300 130270 123090 109370 101600 219360 129060 134240 125550 234210 190180 213680 235730 202540 209720 226210 191650 264030 137600 139380 124760 117570 106930 215930 129350 129200 119320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131290000 406 3418;3448 388 736 612 612 1 9606 Homo sapiens 0.0034277166497531653 ACNDATLVQITSNMDSVGR Oxidation (M) 2066.9361 0.93610247 4542 Q9HAV0;A8K3F6;H7C5J5;A0A6Q8PFW8;A0A6Q8PFE0;A0A6Q8PFV8;C9JD14 GNB4 Guanine nucleotide-binding protein subunit beta-4 yes no 0 1 0 4.5 0.5 1 1 50.305 50.358 3 0.0059262 14145 20230619_1883_Aki_TMTPro18x_K_F4 61.942 47.013 26920 22141 31231 34345 27275 27215 36579 28891 31812 34741 35453 29265 34247 28183 39028 34416 36522 36714 24926 20366 31328 33575 28835 28098 36188 29592 32832 34625 36129 29942 35206 29454 39438 34628 34970 34846 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100410000 407 4542 389 737;738 613 613 2808 1 9606 Homo sapiens -0.054688132838236925 ACNDATLVQITSNMDSVGR Unmodified 2050.9412 0.94118785 4542 Q9HAV0;A8K3F6;H7C5J5;A0A6Q8PFW8;A0A6Q8PFE0;A0A6Q8PFV8;C9JD14 GNB4 Guanine nucleotide-binding protein subunit beta-4 yes no 0 0 0 6 0 1 58.476 58.541 3 2.6299E-39 17515 20230619_1886_Aki_TMTPro18x_K_F6 184.15 170.28 27880 22846 24228 23207 25049 31148 26909 24560 26813 26882 27058 26316 32028 25237 24948 33646 26323 26342 25752 20923 24925 23523 26036 30746 27022 25610 27345 27034 27959 26723 32179 26511 25618 33243 25173 25097 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 414220000 408 4542 389 739 614 614 1 9606 Homo sapiens -0.04224509421237599 ACPALGLEALQPLQPEPPPEPAFSEAQK Acetyl (Protein N-term) 3026.5059 0.50592338 2848 Q9UPQ0-10;Q9UPQ0;D6RD46;Q9UPQ0-2;Q9UPQ0-4 LIMCH1 LIM and calponin homology domains-containing protein 1 yes no 1 0 0 5 1.1 1 2 2 65.771 65.813 3;4 3.422E-06 20498 20230619_1885_Aki_TMTPro18x_K_F5 51.956 44.504 9241.2 7437.3 10319 8791.9 8501.3 10098 7903.9 8690.2 8059.2 9132 7595 11951 8763.3 10432 12598 10122 10674 11631 8552.4 6821.1 10354 8789.1 8960.6 10079 8020.2 8987.2 8196.1 9289 7906.3 11935 9108.8 10781 12623 10271 10238 11028 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63828000 409 2848 390 740;741;742;743;744 615 615 1 9606 Homo sapiens 0.07373066024274522 ACPLQPDHTNDEKE Unmodified 1652.71 0.71004893 3053 H0YKX3;Q15004;G9G6H1 KIAA0101 PCNA-associated factor yes no 0 0 1 1 0 1 37.337 37.337 3 0.0010027 8942 20230619_1880_Aki_TMTPro18x_K_F1 83.243 75.067 30017 24488 33205 33018 26585 30025 30913 31034 38392 36683 39863 34657 39217 31708 26443 41487 44013 32651 27780 22488 33363 32607 28261 30609 31168 31793 38738 36713 40743 35204 39444 33317 28162 40997 41863 31147 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22724000 410 3053 391 745 616 616 1 9606 Homo sapiens -0.09019769340761741 ACQIFVR Unmodified 892.45891 0.45890703 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 2 0.816 1 1 1 43.951 43.992 2 0.0073147 11650 20230619_1881_Aki_TMTPro18x_K_F2 126.16 81.183 961310 785340 815290 893990 1104700 1309000 1129700 1133200 1321400 541590 539350 497210 536870 450780 646730 548750 709600 503300 887770 719970 845420 899330 1126500 1287800 1142700 1153700 1301700 579260 590180 505940 553750 471720 658520 547710 676900 479270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1063999999.9999999 411 3631 392 746;747;748 617;618;619 618 3 9606 Homo sapiens 0.008375930567240175 ACQSCPSEPNTAALQAALAR Unmodified 2114.9837 0.98372137 2382 Q8TEX9-2;Q8TEX9;B3KQ33;Q59FI4;B3KPS9;B3KT38;B3KTB3;D3DS63;H0YN14;Q59H62;B3KSQ4;Q6I9Y8;B3KPY9;B4DXR7;H0YMR4 IPO4 Importin-4 yes no 0 0 0 7.5 0.5 1 1 51.806 51.881 3 2.8162999999999997E-22 14344 20230619_1888_Aki_TMTPro18x_K_F8 171.98 164.47 66872 50788 66908 65049 56042 68662 64814 66050 73304 68621 69731 74271 81983 61990 66256 88116 76760 79634 61807 46628 67792 64578 59366 69077 65139 67733 74061 69388 72269 74753 82494 65748 68352 87585 73362 75716 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136540000 412 2382 393 749;750 620;621 621 2 9606 Homo sapiens -0.029171142929499183 ACQSIYPLHDVFVR Unmodified 1703.8454 0.84536062 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;D6RB09;H0Y9Y4;D6R9B6 RPS3A 40S ribosomal protein S3a yes no 0 0 0 1.5 0.5 1 1 53.088 53.105 3 1.6168E-22 15788 20230619_1881_Aki_TMTPro18x_K_F2 235.22 218.15 342420 276600 354090 373120 336220 365440 360420 392910 378740 420560 327080 389710 420440 366580 335580 474060 435780 458970 316690 254020 358540 368780 351180 370720 362770 400160 383320 422470 342520 396100 422320 384580 349030 473380 416140 436010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2462100000 413 3694 394 751;752 622;623 623 2 9606 Homo sapiens 0.02159175311476247 ACSLLGK Unmodified 747.39491 0.39490979 2038 A8K4A8;Q6PI48;Q9H9J7;Q9NVT8;A0A3B3ISK7;A0A3B3ITK9;Q9H9M6 DARS2 Aspartate--tRNA ligase, mitochondrial yes no 0 0 0 2 0 1 48.056 48.127 2 0.019836 13576 20230619_1881_Aki_TMTPro18x_K_F2 105.39 56.032 356310 262350 340250 348810 424940 412540 411290 407510 480130 389710 435310 404240 473850 377940 360660 418100 504140 461900 329140 240990 348240 345990 433970 412290 417560 416140 483250 395440 450080 409020 476990 393050 376930 421800 480680 438400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138980000 414 2038 395 753 624 624 1 9606 Homo sapiens 0.01110812899787561 ACSVIFPLIYSEMK Unmodified 1656.8255 0.82553638 2492 B4DHX0;E7EVQ6;B4DX34;Q5HYI4;Q14534 SQLE;DKFZp686B0215 Squalene monooxygenase yes no 0 0 0 3 0 1 64.764 64.796 3 0.00073537 20463 20230619_1882_Aki_TMTPro18x_K_F3 85.45 66.854 10334 7564.4 11896 11433 7612 10505 9757.1 8273.9 10935 11578 9404.5 9981.3 12029 10362 7283.9 18970 15829 11938 9561.2 6958.9 11888 11212 8316.6 10635 9754.8 8704.7 11023 11480 9834.3 10234 11982 11120 8025.5 18494 15036 11428 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19436000 415 2492 396 754 625 625 1 9606 Homo sapiens 0.023396632565663822 ACTELGIR Unmodified 918.4593 0.45930096 332 A0A024R5C5;P11498;A0A494C101;A0A494C0T2;A0A494C016;P11498-2;E9PRE7;A0A494BZT5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 5 0 1 40.874 40.961 2 0.0011737 9923 20230619_1885_Aki_TMTPro18x_K_F5 147.34 82.3 139750 106290 129130 145330 153750 163140 164390 142900 176540 175070 201910 192820 196250 177850 182280 200260 216670 196500 129090 97651 132530 143730 158000 163150 165470 148330 180150 175790 205660 194490 199910 185070 187590 200650 206830 186750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274130000 416 332 397 755 626 626 1 9606 Homo sapiens -0.0031903201407885717 ACTILLR Unmodified 845.47931 0.47930812 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 2 0.816 1 1 1 46.539 46.591 2 0.0057238 12850 20230619_1881_Aki_TMTPro18x_K_F2 138.62 50.025 1209200 982380 1043900 1099500 1067800 1231000 1149800 1119400 1285600 1172900 1068100 984670 1271500 938300 965130 1428200 1323000 1195300 1116800 900490 1074900 1102700 1110400 1232400 1158800 1152700 1293700 1177200 1114200 1007700 1276200 995850 1009100 1412800 1261500 1138300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1658699999.9999998 417 2435 398 756;757;758 627;628 627 2 9606 Homo sapiens 0.05038763716538597 ACVEAPK Unmodified 773.37417 0.37417435 2124 A8K9T9;A8K8N7;O15067;B4DJ26;J3KT98 PFAS Phosphoribosylformylglycinamidine synthase yes no 0 0 0 5 0 1 38.322 38.414 2 0.040532 8865 20230619_1885_Aki_TMTPro18x_K_F5 81.297 35.985 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 418 2124 399 759 629 629 1 9606 Homo sapiens -0.021577774798856808 ACWVLHYFCEVK Unmodified 1610.7374 0.73739007 3354 O95373;B3KQG6 IPO7 Importin-7 yes no 0 0 0 3 0 1 62.28 62.31 3 0.00038433 19373 20230619_1882_Aki_TMTPro18x_K_F3 95.094 76.498 54320 41261 55731 46374 34269 45524 43516 36695 54416 55075 39675 43990 58742 54501 49210 61661 56917 56480 50217 37833 56115 46434 37618 45900 43696 38618 54291 54378 42267 45502 58943 56238 50700 61526 54380 53702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26910000 419 3354 400 760 630 630 1 9606 Homo sapiens -0.04354912543408318 ACYGVLR Unmodified 837.41671 0.41670786 3494 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;Q9NQS8;A7E2S3 RPS3 40S ribosomal protein S3 yes no 0 0 0 4.5 3.04 1 1 1 1 40.843 40.863 2 0.0072677 10475 20230619_1880_Aki_TMTPro18x_K_F1 126.52 85.839 682080 629640 661010 522820 1080200 1605700 869660 907560 1539700 136260 288750 317120 199860 250070 351530 119350 326330 302170 631050 575540 679280 551090 1088000 1524500 908450 953840 1475900 188110 351500 311890 215220 253020 352080 133060 312310 285150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 480740000 420 3494 401 761;762;763;764 631;632;633 631 3 9606 Homo sapiens -0.00850382351643475 ACYLSINPQKDETLETEK Unmodified 2138.0201 0.02014968 1483 A0A384NQ21;P61163;R4GMT0;B4DM97;B4DXP9;B4DMT4 ACTR1A Alpha-centractin yes no 0 0 1 5 1 1 1 53.338 53.387 3;4 2.6198E-06 15554 20230619_1883_Aki_TMTPro18x_K_F4 101.15 81.058 112700 99438 103640 118270 82012 113930 151030 116470 91518 177150 148310 136440 121570 97836 138500 93595 119350 71230 104200 91174 105870 117850 88764 115570 146400 120510 99174 174320 148320 138830 125620 101990 139220 93069 114050 68068 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 682470000 421 1483 402 765;766 634;635 634 2 9606 Homo sapiens -0.003339589152346889 ADAAPQLGK Acetyl (Protein N-term) 911.47125 0.47124585 1436 A0A384MTI8;Q96C86;Q53G42 DCPS m7GpppX diphosphatase yes no 1 0 0 3 0 1 46.926 47.005 2 0.0095 12781 20230619_1882_Aki_TMTPro18x_K_F3 67.757 50.981 163890 148400 169710 174630 223910 259210 211600 201080 274610 205490 197240 216070 202760 171000 208820 204650 234230 204360 151690 136040 172790 175280 228130 254340 215900 209530 272980 207950 206420 217250 207120 179660 213600 205140 223650 194220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143450000 422 1436 403 767 636 636 1 9606 Homo sapiens 0.011969080007588673 ADAASSLTVDVTPPTAK Unmodified 1642.8414 0.84138068 2464 B4DQF1;B4DEI4;B4DNR1;Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 GORASP2 Golgi reassembly-stacking protein 2 yes no 0 0 0 6 0 1 53.947 54.025 3 1.3361E-18 15597 20230619_1886_Aki_TMTPro18x_K_F6 183.6 157.88 94450 85628 95808 91615 84578 105050 109820 101170 115160 107940 104950 121390 122810 103700 108650 109770 111230 114190 87405 78428 97044 92264 89488 105120 109420 103830 116620 109150 109070 121940 124090 107870 110880 110480 106420 108400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148190000 423 2464 404 768 637;638 638 2 9606 Homo sapiens 0.04567364298782195 ADAEAVLAPPEPAQ Unmodified 1377.6776 0.67760981 2715 B7ZMD6;Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes no 0 0 0 2 0 1 55.701 55.721 3 0.067409 16935 20230619_1881_Aki_TMTPro18x_K_F2 31.389 13.658 22842 22323 20970 24586 23798 24238 25185 22727 27215 28594 29313 27067 27314 23555 23414 31181 27115 28985 21133 20446 21520 24642 24520 24518 25373 23491 27704 28537 29869 27439 27758 24814 24127 31065 25921 27546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5168000 424 2715 405 769 639 639 1 9606 Homo sapiens 0.0038781131856922 ADAEEEAATR Unmodified 1061.4625 0.46253166 3849 Q13409-2;Q13409-3;Q13409-6;Q13409;Q13409-5;Q13409-7;A0A140VKE9;B4DPZ3;Q59GU5;Q9H5W7;B4DX93 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 0 1 0 1 31.815 31.815 2 1.2357E-09 6692 20230619_1880_Aki_TMTPro18x_K_F1 209.6 192.36 35107 14771 40934 44616 54348 70020 47234 61624 53512 36565 63904 97131 59008 63813 66923 23926 79455 78333 32409 13797 41335 42863 55269 68575 48279 62837 54481 40134 65110 94541 60850 64781 68354 27886 75893 73829 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53786000 425 3849 406 770 640 640 1 9606 Homo sapiens -0.06574110426390689 ADAEGESDLENSR Unmodified 1391.5801 0.58008061 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 1 0 1 36.25 36.25 3 2.0112E-06 8484 20230619_1880_Aki_TMTPro18x_K_F1 138.02 131.94 14850 8512.7 13372 14189 15205 18806 18938 19975 19543 14078 17804 24264 20238 14708 31727 18435 22040 19333 13694 7850.3 13746 13917 15764 18675 18894 20165 19783 14850 18530 23831 21098 15686 31449 18560 21163 18363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24811000 426 1292 407 771 641 641 1 9606 Homo sapiens -0.10004622348219527 ADAEGESDLENSRK Unmodified 1519.675 0.67504363 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 1 1.5 0.5 1 1 36.95 36.98 3 3.2337E-10 8769 20230619_1880_Aki_TMTPro18x_K_F1 166.65 131.16 147290 77964 129820 160640 180840 220560 171140 179190 244430 187380 231230 262730 234910 219400 191310 166510 293050 297610 135760 72158 134320 155980 183890 217310 175340 186120 244120 191380 238160 261580 237800 225020 200760 175600 279440 281260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174790000 427 1292 408 772;773 642;643 642 2 9606 Homo sapiens -0.06400688877033645 ADAENAMR Unmodified 876.37597 0.37596526 3633 P52298;C9JQX9;B3KSB0;P52298-2;B4DJM2;A6PVI3 NCBP2;NCBP2L Nuclear cap-binding protein subunit 2;Nuclear cap-binding protein subunit 2-like yes no 0 0 0 2 0 1 32.224 32.284 2 0.0062834 6605 20230619_1881_Aki_TMTPro18x_K_F2 101.43 81.794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 428 3633 409 774 644 644 1 9606 Homo sapiens -0.06716768461933498 ADAEVIILPK Acetyl (Protein N-term) 1109.6332 0.6332258 1807 O60832;A0A8Q3WLC8;A0A8Q3SIY6;A0A8Q3SIS9;A0A8Q3SJE8;A0A8Q3WLD1;A0A8Q3WLG7;A0A8Q3SIX2;C9IYT0;O60832-2;A0A8Q3WLE4;U5UA77;A0A8Q3WLW8;H7C2Q2;U5U7S7;U5U768;A0A8Q3WLE5 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 1 0 0 3 0 1 63.239 63.27 2 0.00091962 19776 20230619_1882_Aki_TMTPro18x_K_F3 42.599 24.832 73039 61378 61188 74008 64126 79307 86149 75956 79265 94368 81139 86772 96739 77204 88322 98292 88985 98123 67458 56294 63292 73761 67023 79703 85338 78345 81318 94124 83904 88081 97798 81105 90054 98396 85198 93166 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96108000 429 1807 410 775 645 645 1 9606 Homo sapiens 0.08279451963062456 ADAEYYAAHK Unmodified 1137.5091 0.50908792 2318 B2RDK6;O75477;B4DPN7;B0QZ43 ERLIN1 Erlin-1 yes no 0 0 0 4 0 1 40.335 40.378 3 0.075859 9761 20230619_1883_Aki_TMTPro18x_K_F4 33.088 26.399 56955 41260 58673 54748 87770 98921 70842 71437 95387 57617 71492 65104 62474 61002 67452 61971 71723 70274 52640 37902 59876 54735 88466 96016 73141 74472 94709 59309 74044 65657 64353 63086 68706 62750 68573 66664 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84836000 430 2318 411 776 646 646 1 9606 Homo sapiens -0.05416625804446085 ADAFGDELFSVFEGDSTTAAGTK Acetyl (Protein N-term) 2377.0598 0.059765888 3579 P42285;A8K6I4;Q3MHC9;D6REC7 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 1 0 0 3 1.41 1 1 1 1 1 68.688 68.712 3 3.4993E-05 21992 20230619_1882_Aki_TMTPro18x_K_F3 52.541 45.553 3387.1 6088.5 6976.8 5087.9 7680.1 7830.5 6337 4843.4 7667.6 7300.6 7707.9 5658.9 7569.4 7460.5 9247.1 11296 6913.2 10223 3136.1 5547.8 6786.8 5137.8 7872.5 7613.4 6353.5 5072.7 7633 7205.6 7890.8 5707.1 7814.4 7835.2 9258.2 11222 6636.6 9708.8 2 4 5 4 5 4 4 4 4 5 5 3 5 5 5 5 4 5 14714000 431 3579 412 777;778;779;780;781 647 647 1 9606 Homo sapiens -0.07368160430905846 ADALQAGASQFETSAAK Unmodified 1664.8006 0.8005785 3945 Q6FGG2;Q15836;K7ENK9;K7EKX0;J3QRU4;F8WCA0;L7N2F9;P63027 VAMP3;VAMP2 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2 yes no 0 0 0 5.5 0.5 1 1 53.606 53.679 3 5.5015E-14 15459 20230619_1886_Aki_TMTPro18x_K_F6 164.93 144.83 126210 109620 156930 154280 139760 202210 199940 215720 257260 181620 219070 282640 242290 232790 216900 236600 253140 308380 116980 100690 156690 152770 148500 200930 199860 218470 256970 188550 228000 280510 245570 241880 223130 241670 242240 291940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 662120000 432 3945 413 782;783 648;649 648 2 9606 Homo sapiens -0.005229770208188711 ADATNVNNWHWTER Unmodified 1712.7655 0.76553039 3356 O95433;O95433-2;G3V3W9 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 5.5 0.5 1 1 46.568 46.648 3 8.1702E-29 12322 20230619_1885_Aki_TMTPro18x_K_F5 249.3 234.94 59680 61672 70204 71385 67262 89899 81723 79181 94708 70329 97373 108090 72522 157910 57466 65300 67857 79351 55356 56503 70434 71545 70589 89218 81965 81419 95693 72846 98733 109620 74734 155890 59326 67967 64905 75177 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147330000 433 3356 414 784;785 650 650 1 9606 Homo sapiens -0.06234175038139256 ADATSSQDSELER Unmodified 1407.6114 0.61138074 2198 Q0P685;B1APR7;Q99504-2;Q99504-4;Q99504-5;Q99504-3;Q99504 EYA3 Eyes absent homolog;Eyes absent homolog 3 yes no 0 0 0 1 0 1 34.735 34.735 2 9.303E-21 7888 20230619_1880_Aki_TMTPro18x_K_F1 248.32 229.72 9918.6 5809.1 14102 15052 17592 16850 11324 14553 17740 12924 22772 27635 21178 21752 14826 13854 31953 32224 9187.2 5396.5 14027 14444 17811 16838 11999 14985 17883 13605 23076 27162 21404 22215 16124 15080 30409 30411 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18438000 434 2198 415 786 651 651 1 9606 Homo sapiens -0.07612049314138858 ADAVWNK Unmodified 802.39735 0.39735263 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;B4DSR0;A0A804HJI0;A0A804HJG8 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 7.5 0.5 1 1 47.151 47.219 2 0.0065321 12278 20230619_1887_Aki_TMTPro18x_K_F7 132.29 60.052 602100 463910 566570 573800 670550 702950 668010 692550 872690 650230 720350 726730 682760 585380 679600 592350 837050 737940 556270 425730 580070 572230 688330 700840 679930 706930 870660 662120 744660 729280 698150 609050 699250 603630 798670 699720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 307110000 435 1723 416 787;788 652 652 1 9606 Homo sapiens -0.011750153709044753 ADAWEEIRR Acetyl (Protein N-term) 1186.5731 0.57308516 3335 O94874;O94874-3 UFL1 E3 UFM1-protein ligase 1 yes no 1 0 1 1 0 1 46.868 46.868 2 0.0002987 13070 20230619_1880_Aki_TMTPro18x_K_F1 94.302 58.175 31815 19519 22405 24630 26394 30985 26342 27574 33989 24494 27192 29977 34896 27944 23903 29781 33959 34014 29300 17935 23616 24533 27152 30763 26796 28319 33900 25110 28562 30115 34849 29001 25085 30118 32395 32261 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51491000 436 3335 417 789 653 653 1 9606 Homo sapiens -0.012738456474608029 ADCASGIFLAAEK Unmodified 1351.6442 0.6442012 1171 O43747-2;O43747;B3KXW5;A0A140VJE7;Q8IY97;B4DS96 AP1G1 AP-1 complex subunit gamma-1 yes no 0 0 0 6 0 1 57.238 57.31 2 0.00011399 16995 20230619_1886_Aki_TMTPro18x_K_F6 110.39 74.443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 437 1171 418 790 654 654 1 9606 Homo sapiens -0.017555137250155894 ADDADEFGYSR Unmodified 1244.4946 0.49456007 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 1 0 1 42.942 42.942 2 9.0045E-23 11408 20230619_1880_Aki_TMTPro18x_K_F1 246.59 225.13 391740 342250 332910 424940 371260 458550 462110 390270 538630 620320 600580 616420 675930 572490 535830 762020 681450 678100 361930 313950 344350 422600 385620 459510 462790 409800 547320 614520 616540 624560 680910 601910 556630 757340 650570 644960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 669910000 438 1229 419 791 655 655 1 9606 Homo sapiens -0.1179074274323284 ADDDRFPR Unmodified 990.45191 0.45190739 3152 J9R021;Q14152;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 2 0 1 32.671 32.731 3 0.00073689 6724 20230619_1881_Aki_TMTPro18x_K_F2 134.91 97.566 51495 36081 42662 49565 55661 60229 51752 50079 66967 62828 63367 68499 71240 58756 56667 71442 73578 75951 47505 33162 44306 49060 56722 59857 52865 52207 67236 63008 65545 68936 71772 61615 58894 71796 70252 72082 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29764000 439 3152 420 792 656 656 1 9606 Homo sapiens -0.04370048290138584 ADDGFHLLLMTPK Oxidation (M) 1472.7334 0.73335055 2472 B4DF80;Q9H6R4-4;Q9H6R4;A0A0A0MRW6;Q9H6R4-2;Q9H6R4-3 NOL6 Nucleolar protein 6 yes no 0 1 0 7 0 1 57.502 57.557 3 0.014724 16856 20230619_1887_Aki_TMTPro18x_K_F7 59.294 43.07 61777 56704 59336 64393 63034 63334 63481 65877 73195 60818 65689 55483 60883 52730 62801 58199 55114 56685 57148 51962 60553 64405 65159 64216 64298 66991 73682 61594 67481 56514 62376 54774 63379 58336 52818 53850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13037000 440 2472 421 793 657 657 1519 1 9606 Homo sapiens 0.015893212345190477 ADDGFHLLLMTPK Unmodified 1456.7384 0.73843593 2472 B4DF80;Q9H6R4-4;Q9H6R4;A0A0A0MRW6;Q9H6R4-2;Q9H6R4-3 NOL6 Nucleolar protein 6 yes no 0 0 0 8 0 1 61.181 61.213 3 0.013429 18266 20230619_1888_Aki_TMTPro18x_K_F8 63.76 49.07 24194 21233 25221 33614 28679 29800 35223 28082 34870 28917 32734 37394 37810 33223 37785 37755 39181 50753 22390 19531 25643 32848 29660 30375 35099 28873 35439 29453 33954 37433 38437 34661 38502 38590 37555 48026 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51012000 441 2472 421 794 658 658 1 9606 Homo sapiens 0.02833625097150616 ADDGRPFPQVIK Unmodified 1341.7041 0.70409934 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;H3BR04;H3BUH7;H3BMQ8;H3BU78 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 1 6.5 1.12 1 1 1 1 47.286 47.362 3 0.00010662 12296 20230619_1887_Aki_TMTPro18x_K_F7 113.95 77.099 1539700 1147600 1253900 1473800 1396800 1587500 1548400 1551400 1670600 1935000 1961200 1957400 2132000 1806700 1821000 2227000 1911700 2156300 1420700 1053700 1301100 1462700 1444700 1595600 1556400 1597600 1708100 1935300 2005800 1981400 2155500 1890800 1864500 2226100 1829900 2047900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 12489000000 442 3378 422 795;796;797;798 659;660;661 660 3 9606 Homo sapiens 0.04691545000559927 ADDLDFETGDAGASATFPMQCSALR Acetyl (Protein N-term) 2687.1479 0.14794574 3110 I3L397;I3L504;P63241;Q6IS14 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 1 0 0 2.5 1.12 1 1 1 1 64.305 64.317 3 2.1741E-34 20236 20230619_1880_Aki_TMTPro18x_K_F1 152.48 143.31 8525.1 7331.8 10783 10161 7926.4 9485.6 20292 9710.7 12851 14252 11804 9337.3 12298 10174 13039 11160 11264 13123 7902.8 6733.8 10722 10021 8565.7 9644.7 19478 9919.9 12986 14012 12170 9547.1 12567 10526 13138 11315 10807 12437 2 2 2 2 2 2 3 2 2 3 2 2 2 2 2 2 2 2 410180000 443 3110 423 799;800;801;802 662;663;664 662 3 9606 Homo sapiens -0.12814231174206725 ADDLDFETGDAGASATFPMQCSALR Acetyl (Protein N-term);Oxidation (M) 2703.1429 0.14286037 3110 I3L397;I3L504;P63241;Q6IS14 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 1 1 0 2.5 0.5 1 1 62.855 62.874 3 9.1899E-09 19928 20230619_1881_Aki_TMTPro18x_K_F2 65.677 64.987 25796 21165 24092 22865 25044 31384 35207 30448 26634 32132 29256 24147 32547 24891 32445 31087 28671 30881 23840 19394 24637 23077 26213 31062 34632 31210 27752 32129 30019 24921 33081 26003 32779 31133 27484 29325 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180870000 444 3110 423 803;804 665 665 1803 1 9606 Homo sapiens -0.14058535036838293 ADDLLPLGDQTQDGDFGSR Unmodified 2018.9181 0.91812745 3252 O43290;B4DDH9;B4DP43 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 0 1.5 0.5 1 1 59.702 59.708 3 1.7776E-14 18522 20230619_1881_Aki_TMTPro18x_K_F2 149.24 145.06 52806 42711 58387 64641 52443 58994 45598 67296 80554 68611 67558 57411 70350 60221 60108 72197 74717 69143 48868 39277 58779 63386 54830 60246 47531 68152 79554 68953 69953 58939 71248 62670 62172 72154 71309 65725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76416000 445 3252 424 805;806 666 666 1 9606 Homo sapiens -0.05057488942702548 ADDPSSYMEVVQAANTSGNWEELVK Unmodified 2739.2334 0.23338993 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 6 1 1 1 64.298 64.335 3 9.126800000000001E-35 19801 20230619_1887_Aki_TMTPro18x_K_F7 200.89 187.7 42140 36131 42045 38526 35045 36274 40076 46088 44297 53979 44647 55678 49010 44219 52980 63726 50993 55973 38976 33098 42585 38724 37072 37101 40285 46594 44972 54139 46078 56029 50089 46996 53758 63259 48843 53227 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 378990000 446 826 425 807;808 667;668 668 2 9606 Homo sapiens -0.06665742716813838 ADDVDQQQTTNTVEEPLDLIR Acetyl (Protein N-term) 2441.1558 0.15579154 3716 P62310 LSM3 U6 snRNA-associated Sm-like protein LSm3 yes yes 1 0 0 1 0 1 63.554 63.554 3 1.7867E-22 19930 20230619_1880_Aki_TMTPro18x_K_F1 141.86 132.07 3356.7 3328.9 3954.7 2795.9 3397.4 4001.9 4850.3 5206.2 5351 6237.1 5571 4238.6 4868.2 6300.8 5358.7 6586.5 5726.4 4321.8 3112.6 3042.4 3953.7 2890.8 3611.7 3984.7 4822.9 5256.4 5435.2 6187.3 5667.2 4469.6 5029.5 6434.9 5467.4 6486 5465.7 4134.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111720000 447 3716 426 809 669 669 1 9606 Homo sapiens -0.007140125907426409 ADEASELACPTPK Unmodified 1387.6289 0.62894506 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 3.2 0.748 1 2 2 46.008 46.072 2;3 2.2985E-10 12347 20230619_1882_Aki_TMTPro18x_K_F3 176.48 138.19 357010 283300 326160 327250 277980 324380 351310 336130 403010 424840 458520 420200 463530 387410 374690 542670 468930 454290 329820 259780 333190 326990 294770 328550 351660 345010 409880 424450 467670 426070 468720 408810 388710 537380 447660 432480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1652799999.9999998 448 3606 427 810;811;812;813;814 670;671;672 671 3 9606 Homo sapiens -0.04936425312848769 ADEDPALFQSVK Unmodified 1318.6405 0.64049603 3601 P48739;P48739-2;P48739-3;B2R7P6;B3KYB6 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 0 0 3 0 1 54.3 54.347 2 0.00050078 16078 20230619_1882_Aki_TMTPro18x_K_F3 125.75 85.395 24545 17968 22884 24842 21714 28391 25310 23453 32999 29628 29673 38197 40934 28976 29884 46843 42630 54453 22668 16512 23384 24558 22795 28311 25544 24478 33054 29882 31141 38076 40874 31173 31384 47145 40747 51596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12318000 449 3601 428 815 673 673 1 9606 Homo sapiens -0.006078602272282296 ADEELEALR Acetyl (Protein N-term) 1086.5193 0.51931826 3221 O14737;O14737-2;Q3HM38;X6R2P6;K7ESJ4 PDCD5 Programmed cell death protein 5 yes no 1 0 0 1 0 1 53.708 53.708 2 1.1199E-10 15879 20230619_1880_Aki_TMTPro18x_K_F1 122.74 104.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 450 3221 429 816 674 674 1 9606 Homo sapiens -0.020480628698578585 ADEELEALRR Acetyl (Protein N-term) 1242.6204 0.62042929 3221 O14737;O14737-2;Q3HM38;X6R2P6;K7ESJ4 PDCD5 Programmed cell death protein 5 yes no 1 0 1 1 0 1 45.952 45.952 2 5.9691E-10 12661 20230619_1880_Aki_TMTPro18x_K_F1 118.07 111.57 20359 15270 22650 21584 24159 29733 25398 23621 31120 33814 28066 35177 39015 28717 29924 31335 42496 48460 18833 14035 22840 21378 25033 29295 25710 24824 31300 33670 29461 35382 39024 30028 31288 32394 40580 45824 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313880000 451 3221 430 817 675 675 1 9606 Homo sapiens 0.008823888328379326 ADEEPTPADGR Unmodified 1156.4996 0.49964545 4324 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 yes yes 0 0 0 1 0 1 31.889 31.889 2 8.8259E-06 6717 20230619_1880_Aki_TMTPro18x_K_F1 180.09 122.5 17408 8235.6 18709 18365 25538 33886 21686 25628 22895 17284 20638 27570 24115 21249 23379 9698.9 29296 26593 16064 7637.9 19005 17891 25924 32855 22137 26509 23157 18236 21487 27258 24477 21533 24031 10926 27955 25089 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24411000 452 4324 431 818 676 676 1 9606 Homo sapiens -0.07234438880618654 ADEGISFR Unmodified 893.4243 0.42429566 1476 A0A384NPQ2;Q06830;A0A0A0MSI0;B2R4P2 PRDX1 Peroxiredoxin-1 yes no 0 0 0 3.33 1.25 1 1 1 42.941 43.015 2 0.00083568 11168 20230619_1881_Aki_TMTPro18x_K_F2 155 99.555 1119200 881710 800650 908410 1157000 1267800 1085500 1099600 1402300 1141800 1238100 1264600 1314000 1142300 1218700 1479300 1438600 1299900 1032200 807730 845840 920130 1173000 1251200 1108000 1135800 1403600 1156200 1281500 1274700 1334600 1199600 1254500 1470400 1373300 1237100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11588000000 453 1476 432 819;820;821 677;678 677 2 9606 Homo sapiens -0.026679515503701623 ADEHVIDQGDDGDNFYVIER Unmodified 2306.0087 0.0087333705 216 A0A0S2Z472;A8KAH7;A0A024R2W3;P13861-2;P13861;H7C1L0 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 0 0 1 0 1 51.885 51.885 3 4.4804000000000004E-55 15117 20230619_1880_Aki_TMTPro18x_K_F1 280.81 265.88 35838 31838 33965 41723 34929 37427 38810 39877 44839 39410 43499 54701 45656 40015 45921 52822 46782 54881 33142 29221 34719 41257 36309 38230 39099 40577 45269 40314 44873 54321 46551 42421 46781 52970 44809 52075 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119430000 454 216 433 822 679 679 1 9606 Homo sapiens -0.09203064685016216 ADEPMEH Oxidation (M) 843.30688 0.30688264 2961 F5GX11;V9HW55;P25786;P25786-2 PSMA1;HEL-S-275 Proteasome subunit alpha type-1 yes no 0 1 0 1 0 1 27.599 27.599 2 0.046259 5042 20230619_1880_Aki_TMTPro18x_K_F1 81.381 81.381 1836 1221.3 1274.2 2266.5 2570.8 3418 1939 2789.1 3611.7 832.14 2980.2 5187.7 2243 1948.1 1931.2 1200 3344.7 2902.5 1691.4 1127.2 1367.3 2213.8 2560.6 3350 2043.3 2840.3 3545.8 1080.7 3068.4 4950.3 2299.7 2074.5 2042.8 1316.2 3183.5 2740.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3371200 455 2961 434 823 680 680 1755 1 9606 Homo sapiens -0.12103852481482136 ADEPMEH Unmodified 827.31197 0.31196802 2961 F5GX11;V9HW55;P25786;P25786-2 PSMA1;HEL-S-275 Proteasome subunit alpha type-1 yes no 0 0 0 1 0 1 31.737 31.737 2 0.0028266 6690 20230619_1880_Aki_TMTPro18x_K_F1 159.14 159.14 19858 7747.2 19937 26358 31603 37204 18990 31440 32079 20346 32236 44364 30787 33310 30023 14518 47621 47918 18302 7262.6 20455 25175 31614 36612 20317 32194 31903 21903 33081 43501 31498 33734 31421 16812 45396 45158 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17552000 456 2961 434 824 681 681 1 9606 Homo sapiens -0.10859548618873305 ADETKDEQFEQCVQNFNK Unmodified 2228.9644 0.96442571 621 B7Z6Y2;A0A024RAF1;A0A024RAJ2;A0A024RAI5;A0A024RAI6;A0A024RAI4;A0A024RAF0;A0A024RAE9;A0A024RAG8;A0A024RAF6;A0A024RAJ3;A0A024RAG9;O00499-2;O00499-5;O00499-3;O00499-6;O00499-11;O00499-4;O00499-8;O00499-7;O00499-10;O00499-9;O00499;Q9BTH3;B7Z2Z2;Q8WWH9 BIN1 Myc box-dependent-interacting protein 1 yes no 0 0 1 4.5 0.5 1 1 53.345 53.39 4 1.7208E-07 15551 20230619_1883_Aki_TMTPro18x_K_F4 120.63 107.95 110190 88723 102440 106740 93307 112910 116710 114020 116850 156890 127540 123080 163630 107250 124990 172170 138780 131840 101820 81386 104620 106420 98339 113720 116350 117520 119720 155140 131880 125990 163800 114700 128790 169570 132610 125680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184810000 457 621 435 825;826 682;683 682 2 9606 Homo sapiens -0.10089792102917272 ADEVTLSEAGSTAGAAETR Unmodified 1834.8545 0.85446456 174 A0A024R207;B2RCL4;A0A024R1Y6;O75781-2;O75781;B3KMX3;A0A087WWY4;A0A087WTK8;B7Z6Y8 PALM Paralemmin-1 yes no 0 0 0 2 0 1 45.602 45.684 2 0.00058969 12432 20230619_1881_Aki_TMTPro18x_K_F2 82.34 66.449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 458 174 436 827 684 684 1 9606 Homo sapiens -0.029568493797341944 ADEVVWVR Unmodified 972.50288 0.50288033 1207 A0A140VJW5;P14868;D3DP78;Q53R85;C9J7S3;C9JLC1;C9JQM9 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 3 0 1 49.399 49.477 2 0.010019 13903 20230619_1882_Aki_TMTPro18x_K_F3 110.81 75.452 264430 222170 258060 257740 257190 277130 284610 297830 345560 311340 322770 308350 349340 281560 318890 354880 320490 358680 244500 203690 262660 257750 267990 279300 287320 303120 347620 313880 333300 312410 354130 295300 325100 355540 306890 340490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 260720000 459 1207 437 828 685 685 1 9606 Homo sapiens 0.015529007547229412 ADEWLMK Unmodified 891.41604 0.41603916 148;3549 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 5.5 0.5 1 1 56.055 56.124 2 0.0079067 16315 20230619_1885_Aki_TMTPro18x_K_F5 121.52 74.954 91112 77007 88064 89063 74650 114700 108010 102030 122500 136190 121540 123770 146710 111460 114850 143810 140630 141450 84243 70599 89575 89306 79762 113670 107410 106000 124040 135420 125840 125770 147350 117170 118920 143770 134310 134370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99267000 460 148;3549 438 829;830 686 686 1 9606 Homo sapiens -0.03401221791352782 ADFAQACQDAGVR Unmodified 1407.6201 0.62011171 332 A0A024R5C5;P11498;A0A494C101;A0A494C0T2;A0A494C016;P11498-2;E9PRE7 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 44.064 44.121 2 2.4261999999999997E-21 11320 20230619_1883_Aki_TMTPro18x_K_F4 237.76 191.76 173510 143340 160090 176830 148170 157070 167630 158300 168130 224630 272280 266010 251330 230930 250600 275170 284400 278000 160350 131500 163640 175570 155320 160420 168030 163510 175520 224610 273530 267050 257240 241600 256840 275910 271740 264040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 186940000 461 332 439 831;832 687;688 688 2 9606 Homo sapiens -0.06739354158685273 ADFCIIHYAGK Unmodified 1293.6176 0.61759251 148;3549 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 1 0 1 52.995 52.995 3 0.00011813 15590 20230619_1880_Aki_TMTPro18x_K_F1 103.22 88.801 272050 199220 258540 236520 253850 291430 281530 243800 364740 392760 295050 429450 498510 460890 313590 726760 622970 681390 251290 182790 263570 236580 265040 289470 284720 256410 364700 390260 315650 435550 494290 488200 341510 722090 593470 647460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 432360000 462 148;3549 440 833 689 689 1 9606 Homo sapiens -0.017471578256845532 ADFDTYDDR Acetyl (Protein N-term) 1158.4465 0.44654725 3913;3914 Q15056;Q75MU1;B4DMV6;Q75MU2;A0A7I2V4V9;Q15056-2;A0A7I2V385 EIF4H;WBSCR1 Eukaryotic translation initiation factor 4H no no 1 0 0 1 0 1 48.458 48.458 2 3.8907E-05 13699 20230619_1880_Aki_TMTPro18x_K_F1 153.71 137.57 44791 39101 48060 55651 48748 59544 58697 52681 73114 59147 69160 57758 66989 59254 60542 64127 75242 71788 41460 35921 48620 54862 50900 59730 59030 54492 73443 59440 70963 58800 68162 61341 62505 64785 71825 68116 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 293780000 463 3913;3914 441 834 690 690 1 9606 Homo sapiens -0.1263381666328769 ADFFEDENGQR Unmodified 1326.5477 0.54765827 284 B3KN05;A0A7P0TA76;B2RBE0;A0A024R487;O95573;A0A7P0TBB1;B3KMA6;A0A7P0T8L6;A0A7P0TB52 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes no 0 0 0 1 0 1 48.623 48.623 2 3.5858E-06 13822 20230619_1880_Aki_TMTPro18x_K_F1 191.4 188.99 53768 44678 47060 55261 51062 55839 57034 52610 70996 63393 67849 65880 86322 65349 60391 95256 84153 87821 49672 40990 48474 54937 52914 56355 57575 54282 71406 63600 70526 66830 86254 69036 63371 94710 80313 83478 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57321000 464 284 442 835 691 691 1 9606 Homo sapiens -0.10255364960585212 ADFPAGIPECGTDALR Unmodified 1688.7828 0.78281994 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32;H0Y426 VARS Valine--tRNA ligase yes no 0 0 0 4.5 0.5 1 1 55.797 55.833 2 4.7394E-42 16482 20230619_1883_Aki_TMTPro18x_K_F4 274 261.2 74708 66720 70727 76217 63510 80378 77108 76107 76647 101340 93386 90878 109370 84700 97053 120100 104290 111720 69090 61149 72116 76260 66978 80861 76979 78719 78911 100700 95718 92563 110470 89489 99437 119580 99767 106170 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 212710000 465 725 443 836;837 692;693;694 692 3 9606 Homo sapiens -0.03402015547317205 ADFPRPDHR Unmodified 1109.5366 0.53664008 3876 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 1 5.5 0.5 1 1 31.872 31.929 3 0.050691 6317 20230619_1885_Aki_TMTPro18x_K_F5 53.683 33.353 32770 22476 32171 36184 42768 44275 39499 43998 51198 33345 37899 39420 38657 30351 34233 34454 47862 34214 30267 20699 32912 35500 43493 44133 40373 44667 50912 34480 39549 39438 39224 31829 35634 34549 45567 32549 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31298000 466 3876 444 838;839 695 695 1 9606 Homo sapiens -0.01374677753551623 ADFQAER Unmodified 835.38243 0.38243085 818 D3DWY0;C9J2V2;A0A087X0G7;A0A087WUW6;A0A087X1B1;A0A8I5KQX1;Q9Y6K9;Q9Y6K9-2;D3DWY2;A0A8I5KQX5;Q9Y6K9-3 IKBKG NF-kappa-B essential modulator yes no 0 0 0 2 0 1 35.116 35.173 2 0.037376 7739 20230619_1881_Aki_TMTPro18x_K_F2 82.241 35.815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 467 818 445 840 696 696 1 9606 Homo sapiens -0.04184507238915103 ADFQYQESNLR Unmodified 1369.6262 0.62624295 2960 F5GX09;Q5HYJ3 FAM76B Protein FAM76B yes no 0 0 0 3.5 0.5 1 1 45.212 45.272 2 1.9467E-08 11841 20230619_1883_Aki_TMTPro18x_K_F4 173.24 123.76 43447 32931 37259 42765 47343 49490 42013 47771 50589 56390 60557 56259 59408 49346 53634 66394 64969 61297 40109 30238 38540 42459 48243 49499 42961 49128 51485 56510 61576 56921 60393 52030 55336 66122 62027 58288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69001000 468 2960 446 841;842 697 697 1 9606 Homo sapiens -0.043785126554894305 ADFSPFGNSQGPSR Unmodified 1465.6586 0.65860571 1761 A0A8I5KY07;A0A8I5KRP1;A0A8I5KRK1;A0A8I5KYQ0;A0A8I5KZB3;Q9H2M9;A0A8I5QJC9;A0A8I5KSQ5;A0A8I5KWJ9;A0A8I5QJG4 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 8 0 1 50.092 50.168 2 2.5770999999999997E-19 13580 20230619_1888_Aki_TMTPro18x_K_F8 196.11 175.24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 469 1761 447 843 698 698 1 9606 Homo sapiens -0.05559725252487624 ADGELNVDSLITR Acetyl (Protein N-term) 1443.7205 0.72053726 3705 V9HW04;P62140;A0A8V8TRH9;H0Y3Y6;C9JP48;C9J9S3;A0A8V8TR83 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes no 1 0 0 1 0 1 62.77 62.77 2 1.8909000000000002E-45 19621 20230619_1880_Aki_TMTPro18x_K_F1 225.67 210.9 10859 10072 10224 11219 15426 15327 11406 11356 14086 12930 22252 15205 13352 17838 20253 13117 19469 22377 10045 9227.8 10519 11288 15496 15104 11823 11918 14500 13066 22017 15448 14276 18050 20392 13799 18655 21145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83427000 470 3705 448 844 699 699 1 9606 Homo sapiens 0.016425813760179153 ADGESCSVLMMYQESK Oxidation (M) 1849.7532 0.75323565 2788 CON__P41361 yes yes 0 1 0 4 0.707 1 2 1 54.291 54.33 3 1.2095E-08 15267 20230619_1883_Aki_TMTPro18x_K_F4 138.73 134.62 + 134550 106470 128330 137370 167200 172390 154230 154370 221100 248620 325700 441780 274870 267970 339170 277530 321220 400150 124340 97739 131500 136620 170290 171290 158380 161530 225590 251940 327900 433230 285360 282500 342460 285800 308060 378470 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 219220000 471 2788 449 845;846;847;848 700;701;702;703;704 701 1663;1664 5 -0.13765083669954947 ADGESCSVLMMYQESK Unmodified 1833.7583 0.75832103 2788 CON__P41361 yes yes 0 0 0 5.5 0.5 1 1 57.826 57.889 3 3.0041999999999997E-19 17030 20230619_1885_Aki_TMTPro18x_K_F5 200.19 188.28 + 38706 26521 31467 43259 48917 62607 49150 50529 82046 95140 140290 227040 120140 141850 170530 123780 166620 224370 35699 24429 32920 42508 49588 61520 50568 53697 83996 97708 140990 221210 125890 148030 172060 130450 159860 211830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144350000 472 2788 449 849;850 705;706 705 2 -0.12520779807346116 ADGETILK Unmodified 845.44945 0.44944778 3636 P52788;P52788-2 SMS Spermine synthase yes no 0 0 0 3.5 0.5 1 1 45.806 45.866 2 0.0021653 12233 20230619_1882_Aki_TMTPro18x_K_F3 131.06 50.883 229920 171670 220350 219760 241220 246300 213900 212210 268700 283780 349090 345350 344510 284280 294850 301210 397780 386080 212410 157620 224880 218320 248140 246340 219100 221110 273870 284840 354070 345680 349380 296290 306390 307150 379520 365840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 444680000 473 3636 450 851;852 707 707 1 9606 Homo sapiens 0.020541032521919078 ADGGFRPSR Unmodified 961.47298 0.47297719 3974 Q4G0N4-2;Q4G0N4 NADK2 NAD kinase 2, mitochondrial yes no 0 0 1 6.5 0.5 1 1 29.637 29.706 3 0.0010969 5234 20230619_1887_Aki_TMTPro18x_K_F7 95.311 55.266 26400 24590 28818 25368 34669 38117 31041 32078 36172 30264 34739 34404 33695 27417 35224 30962 47124 32784 24451 22514 29139 25739 35449 37447 31675 33125 36488 30821 35669 34503 34503 28705 36416 31177 44873 31172 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15299000 474 3974 451 853;854 708 708 1 9606 Homo sapiens -0.009300381906200528 ADGGPEAGELPSIGEATAALALAGR Unmodified 2293.155 0.15500368 240 A0A024R3F4;A0A024R3H6;Q86UU1-2;Q86UU1;Q5W9G0;Q86UU1-3 PHLDB1;KIAA0638 Pleckstrin homology-like domain family B member 1 yes no 0 0 0 5 0 1 63.863 63.909 3 1.0641999999999999E-19 19713 20230619_1885_Aki_TMTPro18x_K_F5 150.36 123.55 14314 10505 15334 15545 13186 13362 15520 16086 17489 17947 20601 20602 22339 15757 18918 18240 20542 27091 13235 9662 15459 15256 13917 13738 15584 16298 17830 18111 21063 20627 22557 16575 19385 18783 19684 25613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83264000 475 240 452 855 709 709 1 9606 Homo sapiens 0.06015237550900565 ADGGTQVIDTK Unmodified 1103.5459 0.54586736 425 B4DFL1;E9PEX6;B4DMK9;A0A024R713;P09622;P09622-2 DLD Dihydrolipoyl dehydrogenase;Dihydrolipoyl dehydrogenase, mitochondrial yes no 0 0 0 3.67 0.471 1 2 42.225 42.275 2;3 6.9958E-09 10595 20230619_1882_Aki_TMTPro18x_K_F3 186.74 123.17 108570 67383 128540 153010 185650 188270 164020 199410 167840 131760 188920 183050 190570 154840 144900 111220 193030 164950 100390 62418 129920 147770 187520 187800 166850 201030 171460 138330 192820 182540 192220 158430 150590 115620 184030 156200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114440000 476 425 453 856;857;858 710;711 710 2 9606 Homo sapiens -0.001763739785474172 ADGIVSK Unmodified 688.37555 0.37555455 3742 Q8WVC2;Q6FGH5;P63220 RPS21 40S ribosomal protein S21 yes no 0 0 0 5.5 0.5 1 1 41.77 41.86 2 0.04865 10283 20230619_1885_Aki_TMTPro18x_K_F5 86.833 17.918 221450 106230 327830 318440 457270 456990 338330 440210 319630 209920 400480 475550 303550 324200 398230 139850 455320 392970 205060 99124 325980 305560 460770 450780 347900 444470 329330 232500 403570 465130 317820 329520 404930 158580 434660 370790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 405660000 477 3742 454 859;860 712;713 712 2 9606 Homo sapiens 0.01890179880535925 ADGPPGPHDGGDRPSAEAR Unmodified 1857.8354 0.83540087 3976 Q4KMP7;Q4KMP7-2 TBC1D10B TBC1 domain family member 10B yes no 0 0 1 1.5 0.5 1 1 27.857 27.895 4 2.0522E-07 5302 20230619_1880_Aki_TMTPro18x_K_F1 116.98 92.785 4848.2 4827 4851.1 5614.7 6339.5 7942 7148.6 9046.2 7972.6 6153.5 10354 7645.5 7940.6 7016.5 6778.7 9347.7 10177 9084.8 4489.1 4411.7 4920.6 5637.5 6496.1 7875.4 7190.4 9078.8 8153.4 6419.4 10384 7694.2 8129.8 7378.8 7115.2 9333.2 9696.9 8635.5 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8736700 478 3976 455 861;862 714;715 714 2 9606 Homo sapiens -0.05920341160162934 ADGQVAELLLR Acetyl (Protein N-term) 1225.6667 0.6666512 4109 Q6IBR2;Q9Y285;Q9Y285-2;K7ER16;K7EK06 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 1 0 0 3 0.816 1 1 1 64.163 64.179 2 1.1064E-39 20464 20230619_1881_Aki_TMTPro18x_K_F2 193.41 155.8 14330 6937.8 11555 16774 7144.4 11816 14869 8281.1 21184 6819.8 10557 16093 20423 12323 17006 17614 19011 15998 13196 6354.9 11942 16035 7448.9 12217 14711 8383.7 20744 7041 11803 15791 20342 13126 17464 17524 18149 15223 2 1 2 2 1 2 2 1 2 1 2 2 2 2 2 2 2 2 1147700000 479 4109 456 863;864;865 716;717 716 2 9606 Homo sapiens 0.06284453734951967 ADGSSLPEWVTDNAGTLHFAR Unmodified 2243.0607 0.060709361 3847 Q13308;Q13308-6;Q13308-4;Q13308-5;Q59FV9 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 7 0 1 61.063 61.106 3 3.2905999999999997E-23 18254 20230619_1887_Aki_TMTPro18x_K_F7 189.55 168.81 42870 37691 45810 39977 36687 47598 44963 44357 51082 62008 61987 64943 57389 54365 60908 60618 62361 65655 39682 34523 46126 40318 39103 47479 45074 46004 52168 61791 62916 65400 58917 56741 61954 61104 59676 62294 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 801710000 480 3847 457 866 718 718 1 9606 Homo sapiens -0.011098564806161448 ADGTATAPPPR Unmodified 1052.5251 0.52507234 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H962;B4DGF6 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 3 0 1 30.221 30.315 2 0.0034916 5724 20230619_1882_Aki_TMTPro18x_K_F3 95.502 82.448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 481 594 458 867 719 719 1 9606 Homo sapiens 0.0009108043248033937 ADGVHTVEPTEAGDYK Unmodified 1687.7689 0.76894402 3852 Q13445 TMED1 Transmembrane emp24 domain-containing protein 1 yes yes 0 0 0 2.5 0.5 1 1 42.112 42.183 3 4.4127E-08 10836 20230619_1881_Aki_TMTPro18x_K_F2 126.16 114.55 162720 134810 150940 186100 185290 194610 185120 180900 227240 202710 255230 278500 264860 250600 228510 281120 310990 299230 150380 123830 155030 183740 189750 195830 187960 186430 230110 206090 261090 278380 268540 260870 237840 282880 296670 284060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 230740000 482 3852 459 868;869 720;721 720 2 9606 Homo sapiens -0.04742969774792982 ADGVPVYLK Unmodified 960.52803 0.52803245 3219 Q6FGA0;O14548 COX7A2L Cytochrome c oxidase subunit 7A-related protein, mitochondrial yes no 0 0 0 7 0 1 52.761 52.831 2 0.010323 14870 20230619_1887_Aki_TMTPro18x_K_F7 84.568 51.727 30084 25059 30706 33401 29182 38395 36904 33741 45326 30295 31090 28565 32561 27880 32749 34069 31901 34426 27826 23008 31147 33101 30696 38316 37003 34710 45079 30789 32622 29077 33201 29113 33260 34154 30548 32685 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35131000 483 3219 460 870 722 722 1 9606 Homo sapiens 0.04618955557282334 ADGYEPPVQESV Unmodified 1289.5776 0.57756142 3694 Q6NXR8;P61247;D6RAT0;H0Y9Y4;D6R9B6 RPS3A 40S ribosomal protein S3a yes no 0 0 0 1.5 0.5 1 1 51.356 51.379 2 0.00042613 15012 20230619_1881_Aki_TMTPro18x_K_F2 108.43 70.787 197350 166510 183820 174800 169630 199810 206940 208280 226440 237520 243140 236460 261180 214240 234570 263860 246070 259510 182410 152520 187610 176320 178440 200390 207150 212920 230320 238410 249420 239410 264650 224390 239800 264030 235420 246480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3844399999.9999995 484 3694 461 871;872 723 723 1 9606 Homo sapiens -0.05564426015234858 ADGYVLEGK Unmodified 950.47091 0.4709115 3707 Q5JR94;P62241;Q5JR95;Q9BS10 RPS8 40S ribosomal protein S8 yes no 0 0 0 4.5 0.5 1 1 48.282 48.34 3 0.0097042 13178 20230619_1883_Aki_TMTPro18x_K_F4 61.65 16.489 474630 349980 392650 430060 498820 511100 496510 474060 610090 506070 535250 498270 615960 436110 440940 636820 563300 498340 437980 321220 407480 428780 509720 509940 504080 487720 611950 509760 555740 504560 617310 462710 459270 628400 537330 475030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1923799999.9999998 485 3707 462 873;874 724 724 1 9606 Homo sapiens -0.00630511719077731 ADHDFVVQEDFMK Unmodified 1579.6977 0.69769333 896 V9HW24;A0A087X2I1;P62333 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 3 0 1 53.682 53.734 3 8.5591E-06 15811 20230619_1882_Aki_TMTPro18x_K_F3 120.84 111.05 161560 71155 135650 161220 148670 153030 160270 172210 203870 166780 166290 162450 186640 163150 152780 194900 162420 171100 148760 66042 140290 155140 153750 155660 162270 174440 203650 168780 173210 165230 188280 169900 156730 193910 155370 162730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139380000 486 896 463 875 725 725 1 9606 Homo sapiens -0.06896761013149444 ADHGEPIGR Unmodified 950.45699 0.45699277 751 A0A024RD80;P08238;Q6PK50 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 0 2 0.707 1 2 1 24.136 24.21 2;3 2.7032E-06 3829 20230619_1881_Aki_TMTPro18x_K_F2 152.11 122.3 974810 85871 1085900 1192700 1577600 1184800 1155100 1535600 1372500 1118100 1837200 2347800 1062800 1513000 1264300 661910 1619400 1796200 897200 89353 1101000 1111300 1584000 1205500 1197400 1533000 1402300 1188800 1832600 2295600 1122900 1541000 1298400 744730 1547300 1693400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7249799999.999999 487 751 464 876;877;878;879 726;727;728 727 3 9606 Homo sapiens -0.02021744427520389 ADHQPLTEASYVNLPTIALCNTDSPLR Unmodified 2995.4709 0.47093486 205 C9J9K3;A0A8V8TMX1;A0A024R2L6;A0A0C4DG17;A0A8V8TLA4;P08865;A0A8I5KQE6;A0A8V8TMP3;A0A024R7P5 RPSA;LOC388524 40S ribosomal protein SA yes no 0 0 0 7.5 0.5 1 1 61.555 61.589 3 5.904299999999999E-50 18476 20230619_1887_Aki_TMTPro18x_K_F7 237.97 230.57 99527 21313 86707 102210 85055 78911 106790 110930 120310 133440 124960 126160 140090 120570 103220 159280 113670 149200 91508 20328 89205 96114 88976 82168 106840 111710 122080 133380 128620 128260 140750 126600 106510 158700 108900 141690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2387000000 488 205 465 880;881 729;730 729 2 9606 Homo sapiens 0.0530182321635948 ADHSFSDGVPSDSVEAAK Acetyl (Protein N-term) 1859.8174 0.81735077 717 Q99733-2;Q99733;B4DS05;B7ZB83;B7ZAK9;A0A024RCC9;A0A2U9QGI0;C9JZI7;A0A994J3W0;B7ZAC7;A0A0J9YXQ2;C9J6D1;E9PKT8;E9PNJ7;E9PS34;E9PJJ2;E9PNW0;E9PP22;E9PKI2;C9J1B1 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 1 0 0 1 0 1 47.931 47.931 3 4.967E-30 13509 20230619_1880_Aki_TMTPro18x_K_F1 42.059 33.35 67543 63655 72865 80140 70873 87046 77467 80898 86909 89324 84377 93967 84368 64895 90955 97565 91726 114650 62555 58385 73601 79658 74010 87332 78048 83294 87944 89934 86782 94169 86379 69690 92462 98435 87914 108630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198630000 489 717 466 882 731 731 1 9606 Homo sapiens -0.07816520925484838 ADIDNLPR Acetyl (Protein N-term) 954.47706 0.47705951 2990 F8W543 NAP1L1 yes yes 1 0 0 1 0 1 48.133 48.133 2 0.00058394 13593 20230619_1880_Aki_TMTPro18x_K_F1 154.09 146.68 7729.5 7505.3 6465.4 8978.9 7356.1 9633.9 10584 9179.7 11718 8808.4 9320.2 10239 7826.5 8748 8803.3 8413.3 9031 10453 7145.9 6879.8 6706.7 8951.9 7671.2 9678 10509 9405.5 11764 8971.6 9619.1 10273 8097.2 9047.9 8945.7 8576.6 8648.5 9901.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55641000 490 2990 468 883 732 732 1 9606 Homo sapiens -0.0019999348758119595 ADIEISGPK Unmodified 928.48656 0.48656157 3815 Q09666;Q6ZQN2;Q13727 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 4 0 1 47.482 47.525 3 0.01531 12848 20230619_1883_Aki_TMTPro18x_K_F4 71.614 50.914 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 491 3815 469 884 733 733 1 9606 Homo sapiens 0.01945774797957256 ADIEMPFDPSK Unmodified 1248.5696 0.56963927 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 5 0 1 58.826 58.88 3 0.056212 17467 20230619_1885_Aki_TMTPro18x_K_F5 35.677 20.998 22963 20481 22684 28184 24471 27725 28217 26522 29054 27065 28969 27146 30850 28375 26206 29734 32708 33387 21243 18806 23131 27809 25378 28036 28256 27205 29544 27336 29796 27608 31226 29300 27108 30053 31237 31670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16006000 492 3299 470 885 734 734 1 9606 Homo sapiens -0.04470276536358142 ADIEVACYGYEGIDAVK Unmodified 1871.8611 0.86112984 3389 Q53XC0;P05198;H0YJS4;G3V4T5 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 4 0 1 61.108 61.112 3 1.9333E-09 18781 20230619_1883_Aki_TMTPro18x_K_F4 135.47 116.87 57012 41224 46678 59084 48216 50545 60590 57459 57887 69993 63542 62490 75516 59833 64093 72554 68899 79784 52600 37902 48377 58065 50276 51913 60287 58577 59428 69807 65449 63689 76116 62528 65690 73081 65951 75663 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253140000 493 3389 471 886 735 735 1 9606 Homo sapiens -0.03992627752745648 ADIFMFDEPSSYLDVK Oxidation (M) 1891.855 0.85498183 3692 P61221;D6R9I9 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 1 0 5 0 1 63.766 63.812 3 0.0040381 19667 20230619_1885_Aki_TMTPro18x_K_F5 68.257 50.34 57756 43672 39564 59455 53891 57214 57148 53537 67448 66606 75694 85000 82761 57472 61563 80867 64219 58488 53241 40122 42040 58671 54971 57941 57728 55336 68461 67160 77617 84501 83133 61426 63228 79592 61379 55810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84510000 494 3692 472 887 736 736 2379 1 9606 Homo sapiens -0.05527145984274284 ADIIYPGHGPVIHNAEAK Unmodified 1900.9795 0.97954591 484 A0A024R811;Q53H82 LACTB2 Beta-lactamase-like protein 2 yes no 0 0 0 6.5 0.5 1 1 44.546 44.632 4 4.6279E-10 11153 20230619_1887_Aki_TMTPro18x_K_F7 142.58 130.79 59850 42485 49008 59515 48663 60421 53357 58549 75914 66216 65267 69207 79578 65496 58437 92890 86380 89893 55213 39055 50748 58689 50824 60955 54232 60143 75630 66631 68089 70041 79784 69139 61528 92623 82402 85400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74670000 495 484 473 888;889 737 737 1 9606 Homo sapiens 0.06509532337986457 ADILEDK Unmodified 802.40725 0.40724861 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;M0R2T0;B4DEG4;M0R0N3;M0QYQ7 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 2 0.816 1 1 1 49.454 49.499 2 0.015621 14189 20230619_1881_Aki_TMTPro18x_K_F2 114.93 34.753 1032700 621470 709000 928040 1036800 1358800 972680 1098700 2009100 1155200 1254300 1743000 1909600 1700900 867030 2550500 1884900 2452900 950890 572160 753670 916710 1054100 1334300 1015500 1141600 1955800 1185000 1352500 1742700 1880800 1799800 965750 2538200 1797500 2328700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1338900000 496 3194;3631 474 890;891;892 738;739 738 2 9606 Homo sapiens -0.0018587215620300412 ADILEDKDGK Unmodified 1102.5506 0.55061839 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;M0R2T0;B4DEG4;M0R0N3;M0QYQ7 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 0 1 3.5 1.12 1 1 1 1 47.32 47.386 3 0.00056566 12786 20230619_1883_Aki_TMTPro18x_K_F4 106.62 78.441 2362900 1823800 2380800 2429400 3593600 2926000 3129700 2846800 2974600 2686200 3246900 1966700 2128700 1576100 3189900 1179700 1508800 774040 2184200 1675000 2434500 2410100 3614700 2921600 3177000 2909400 3048500 2701500 3262900 2017600 2254100 1618800 3121000 1176700 1454800 742180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2384600000 497 3194;3631 475 893;894;895;896 740;741;742 742 3 9606 Homo sapiens 0.00344510164222811 ADILQVGLR Unmodified 983.57638 0.57637963 2851 D6REB4;Q9H074-2;A0A024R094;Q9H074-3;Q9H074;D6RJF2 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes no 0 0 0 8 0 1 54.456 54.523 2 0.00065024 15472 20230619_1888_Aki_TMTPro18x_K_F8 144.12 103.09 283700 203680 232990 241250 253840 317620 289050 299190 355430 217100 187080 166640 203650 170780 216550 207110 209320 178810 261740 186890 241320 241590 263480 314830 291320 304600 351260 222570 200530 171750 208000 177970 219510 206010 200140 170240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116720000 498 2851 476 897 743 743 1 9606 Homo sapiens 0.08393449197171776 ADILSQSETLASQDLSGDFK Acetyl (Protein N-term) 2166.0328 0.032822856 879 A0A087X0M4;A0A8Q3WKX9;A0A087WWF4;A0A8Q3WLG9;A0A8Q3WKX1 SLC4A1AP yes no 1 0 0 3 0.816 1 1 1 66.311 66.33 3 0.0054976 21085 20230619_1882_Aki_TMTPro18x_K_F3 43.955 33.759 9009.8 7895.8 6577.8 9282.1 7361.9 11927 11236 9283.7 10907 8865.1 9827.9 10165 10173 8902.6 10388 11516 9917.4 12661 8316.2 7238.9 6920.7 9288.8 7721.1 11789 11083 9662.2 11076 9027.9 10155 10222 10383 9363.2 10541 11590 9512.4 12003 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12820000 499 879 477 898;899;900 744 744 1 9606 Homo sapiens -0.0035522425141607528 ADKNEVAAEVAK Unmodified 1243.6408 0.64083038 2037 A8K492;P56192;H0YIP0 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 0 1 4 0 1 43.896 43.94 3 0.030659 11298 20230619_1883_Aki_TMTPro18x_K_F4 57.804 23.625 57210 49219 56238 57649 61317 69010 62060 55807 61301 76707 83029 70299 67576 60448 81453 57598 72731 50718 52910 45126 57295 57677 63306 68630 62525 58495 63409 76190 83434 71305 70110 62508 81961 57642 69521 48326 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87126000 500 2037 479 901 745 745 1 9606 Homo sapiens 0.028755594926451522 ADKPDMGEIASFDK Acetyl (Protein N-term);Oxidation (M) 1580.7028 0.70283829 3744 P63313 TMSB10 Thymosin beta-10 yes yes 1 1 1 2.86 1.25 1 2 2 1 1 52.615 52.654 2;3 2.9706E-06 15211 20230619_1881_Aki_TMTPro18x_K_F2 83.045 67.474 106950 82397 94605 111700 138470 130590 134190 127690 136000 123640 128060 120600 121010 106760 118660 134290 127110 128100 98765 75689 97881 110600 140070 130580 135550 130540 138130 125090 131430 122160 123660 112020 121260 134120 121540 121740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2696500000 501 3744 480 902;903;904;905;906;907;908 746;747 746 2418 2 9606 Homo sapiens -0.06428501941172726 ADKPDMGEIASFDK Acetyl (Protein N-term) 1564.7079 0.70792366 3744 P63313 TMSB10 Thymosin beta-10 yes yes 1 0 1 3.17 1.34 1 1 1 2 1 57.988 58.006 2;3 4.1351E-22 17570 20230619_1882_Aki_TMTPro18x_K_F3 74.649 62.503 826850 673320 770620 831160 943310 1167300 1048400 1056500 1133700 1090200 935660 941440 1192900 901510 948790 1186200 1041100 1091600 764120 617770 790790 830720 970040 1151900 1053300 1087300 1142900 1095700 980550 961380 1197100 946890 975500 1181400 995620 1037600 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5262800000 502 3744 480 909;910;911;912;913;914 748;749;750;751;752 749 5 9606 Homo sapiens -0.05184198078541158 ADLAECNIK Acetyl (Protein N-term) 1074.5016 0.5015597 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;Q6P164;Q66K46;Q2TA90;B4DS27 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 1 0 0 1.5 0.5 1 1 52.122 52.142 2 0.00015482 15375 20230619_1881_Aki_TMTPro18x_K_F2 89.142 76.105 215470 194720 208000 237220 210620 259950 227780 230660 301150 256410 242300 239360 266680 210460 248940 292150 268170 255150 199310 178570 212160 236330 219380 260420 230930 238370 300250 257370 252420 242880 270500 222400 254750 290070 256310 242780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 317200000 503 2727 481 915;916 753;754 754 2 9606 Homo sapiens -0.03271101396353515 ADLANEEKPAIAPPVFVFQK Acetyl (Protein N-term) 2225.1732 0.17321992 2698 Q9H6Z4;Q9H6Z4-2;Q9H6Z4-3;Q53GE1;B7Z7F3;Q308M8;A0A384ME25;B7Z664;K7ENJ2;K7EPW1;K7ENB9;K7EID7 RANBP3 Ran-binding protein 3 yes no 1 0 1 7 0 1 63.705 63.737 3 3.0091E-11 19538 20230619_1887_Aki_TMTPro18x_K_F7 63.918 47.975 47955 41674 55524 54144 54100 56947 60493 55421 48525 64550 61513 43052 47713 36616 71763 36675 38348 35290 44418 38247 55744 53697 56392 57345 60277 56972 50696 64050 61831 44465 50196 38027 70513 36900 36993 33545 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134320000 504 2698 482 917 755 755 1 9606 Homo sapiens 0.10964024263466854 ADLEAQR Unmodified 801.39808 0.39808091 492 A0A024R845;P61106;X6RFL8;A0A994J451 RAB14 Ras-related protein Rab-14 yes no 0 0 0 1.5 0.5 1 1 32.971 33 2 0.023296 7182 20230619_1880_Aki_TMTPro18x_K_F1 100.75 27.118 95857 79047 118140 118990 152760 147970 126280 145420 126040 88536 150830 149180 108410 110090 152940 59697 155670 128530 88811 72682 118650 117230 154980 147350 128960 147190 129180 94374 151810 147310 114210 112160 154340 64980 148730 121450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59582000 505 492 483 918;919 756 756 1 9606 Homo sapiens -0.010562207218640651 ADLEEQLSDEEK Acetyl (Protein N-term) 1446.6362 0.63619851 1928 Q53GE2;Q53GC7;A4D0V4;P47755;C9JUG7;F8W9N7;P47755-2;F8WED3 CAPZA2 F-actin-capping protein subunit alpha-2 yes no 1 0 0 1 0 1 58.698 58.698 2 1.8841E-09 17942 20230619_1880_Aki_TMTPro18x_K_F1 140.75 125.6 39804 37675 44193 46915 44165 42298 42361 38129 45766 57017 65196 58277 56217 43769 51551 60221 64261 64469 36875 34551 44530 46557 45764 43057 42949 39776 47239 56625 65528 58632 57412 46525 53253 60459 61363 61188 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1164300000 506 1928 484 920 757 757 1 9606 Homo sapiens -0.0692541423138664 ADLGVSGPK Unmodified 842.44978 0.44978213 3815 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 6 0 1 43.926 44.018 2 0.00014592 11239 20230619_1886_Aki_TMTPro18x_K_F6 138.4 93.314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 507 3815 485 921 758 758 1 9606 Homo sapiens 0.02225522972048566 ADLIAYLK Unmodified 905.52222 0.52221879 2752 C9JFR7;G4XXL9;P99999;Q6LER6 CYCS Cytochrome c yes no 0 0 0 1.5 0.5 1 1 62.272 62.277 3 0.0060929 19418 20230619_1880_Aki_TMTPro18x_K_F1 87.616 44.59 216790 173570 196920 241730 213720 188850 249160 241690 194130 196860 194820 186690 249050 203160 231270 284190 244000 270420 200280 159460 202180 237780 221100 196260 247490 242180 201040 200960 202280 190850 251580 213360 236490 283320 233520 256890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 568980000 508 2752 486 922;923 759;760 759 2 9606 Homo sapiens 0.0656785704561571 ADLINNLGTIAK Unmodified 1241.698 0.69795133 751;3177;4018 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;B4DTA5;Q86SX1;Q14568;A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;O14942;Q58FF8 EL52;HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 0 0 0 3.5 2.69 1 1 1 1 60.452 60.471 2;3 3.1179E-09 17969 20230619_1888_Aki_TMTPro18x_K_F8 217.74 185.81 726600 592610 675490 704390 618090 750140 692540 704090 765540 894560 809400 784630 957990 734370 790240 1022600 847770 869730 671460 543510 689790 702880 649260 753980 696550 727500 778480 890340 834640 800140 964480 774690 811000 1013700 810740 827620 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 11067000000 509 3177;751;4018 487 924;925;926;927 761;762;763;764;765 765 5 9606 Homo sapiens 0.08677026769055374 ADLLGSILSSMEKPPSLGDQETR Acetyl (Protein N-term) 2485.237 0.23701875 3302 O75391 SPAG7 Sperm-associated antigen 7 yes yes 1 0 1 6.5 0.5 1 1 67.609 67.641 3 3.2027E-13 21153 20230619_1887_Aki_TMTPro18x_K_F7 68.552 53.624 16653 11370 14305 12685 11832 13744 15138 16099 13355 17796 18293 14331 15870 12365 15972 18344 15612 15054 15365 10430 14681 12730 12579 13873 15030 16321 13917 17773 18407 14657 16267 13139 16234 18147 14937 14335 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 16476000 510 3302 488 928;929 766;767 767 2 9606 Homo sapiens 0.05380971847625915 ADLLLSTQPGREEGSPLELER Unmodified 2309.1863 0.18630381 1704 P08195-4;P08195-5;P08195;P08195-3;A0A7P0Z4P5;A0A7P0TAN7;A0A7P0Z4A0;A0A7P0T9F7;F5GZS6;P08195-2;A0A7P0TBF8;B4E2Z3;F5H056;F5GZI0 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 1 4 0 1 57.026 57.032 3 2.8605E-55 17064 20230619_1883_Aki_TMTPro18x_K_F4 282.34 259.51 247120 199330 209760 254390 155800 179500 200440 194550 211090 323400 324200 420620 354740 291680 399800 405400 374620 505190 228200 182950 215630 251370 167450 187590 200040 201380 219420 322560 329460 417870 363080 311280 404440 411050 359580 478300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 503610000 511 1704 489 930 768 768 1 9606 Homo sapiens 0.08407810585003972 ADLLQREEEEEEEEDQEGDRETTIR Unmodified 3047.3439 0.34393925 3924 Q15269 PWP2 Periodic tryptophan protein 2 homolog yes yes 0 0 2 1 0 1 46.338 46.338 4 1.7731E-19 12850 20230619_1880_Aki_TMTPro18x_K_F1 151.42 139.78 37702 30925 34138 38441 38740 40941 37666 44666 39118 51224 46108 47908 55454 45578 46547 56857 47306 52145 34836 28375 35065 38240 39838 41301 38117 45520 40130 51284 47398 48708 55858 47694 47590 56663 45288 49560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238610000 512 3924 490 931 769 769 1 9606 Homo sapiens -0.09783895985492563 ADLSGITK Unmodified 803.43888 0.43888309 2785 CON__P34955 yes yes 0 0 0 6.5 0.5 1 1 47.251 47.335 2 0.015415 12349 20230619_1887_Aki_TMTPro18x_K_F7 99.802 46.636 + 305560 341500 577900 316560 1591400 1605000 868890 949680 1406100 501290 768260 1007200 513870 539100 681330 451690 680870 980150 285270 312220 577950 338610 1552600 1510300 933620 1002000 1374000 548110 808770 982660 541500 566830 688690 485550 653530 924250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 580600000 513 2785 491 932;933 770 770 1 0.02930120597750374 ADLSLADALTEPSPDIEGEIK Acetyl (Protein N-term) 2225.0951 0.095088762 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;P27816-5;B4DM10;Q6NX68;A0A024R2V2;A0A024R2S1;Q05D06;H7C456;A0A0J9YW37;P27816-7;A0A0J9YVV8 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 1 0 0 1 0 1 66.059 66.059 3 0.00012735 20959 20230619_1880_Aki_TMTPro18x_K_F1 46.362 33.595 7110.5 4508.5 5352.9 5662.2 5312.5 7015.1 6318.8 7517.7 6981.7 8313.3 7834 12165 10348 8008.3 8074.1 11840 10958 11633 6552.2 4141.7 5586.5 5642.3 5562.5 6998.6 6337.4 7662.6 7118.9 8468.1 8135.8 12023 10371 8599.6 8430.4 11813 10462 11048 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3324200 514 2902 492 934 771;772 772 2 9606 Homo sapiens 0.03154502096958822 ADLTALFLPR Unmodified 1115.6339 0.63389451 3831 Q13045-2;Q13045;Q59H95;B4DIX0;Q13045-3 FLII Protein flightless-1 homolog yes no 0 0 0 3 0 1 63.574 63.605 2 0.0043774 19926 20230619_1882_Aki_TMTPro18x_K_F3 111.06 87.265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 515 3831 493 935 773 773 1 9606 Homo sapiens 0.08070291402736984 ADLTEYLSTHYK Unmodified 1439.6933 0.69325988 3533 P31930;B4DUL5 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 7.5 0.5 1 1 55.26 55.322 3 5.3292E-07 15870 20230619_1887_Aki_TMTPro18x_K_F7 150.21 133.64 203080 177130 210560 239160 238360 282200 262940 267070 266520 230120 223750 253270 272950 201910 226580 250890 242550 269440 187920 162630 213920 236910 246120 281630 263780 272880 269610 235260 233950 254270 274620 212720 232240 252300 232100 255620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 454510000 516 3533 494 936;937 774;775 774 2 9606 Homo sapiens -0.008999021643830929 ADLYLEGK Unmodified 907.4651 0.46509784 2081 A8K5W7;Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 0 5 0 1 51.295 51.37 3 0.037297 14339 20230619_1885_Aki_TMTPro18x_K_F5 60.436 27.596 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 517 2081 495 938 776 776 1 9606 Homo sapiens 0.007663897692282262 ADMETLQR Oxidation (M) 978.44404 0.44404482 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 1 0 1.5 0.5 1 1 32.18 32.21 2 0.0029621 6570 20230619_1881_Aki_TMTPro18x_K_F2 118.07 69.01 90841 65903 85635 86108 98801 87747 88586 102440 113930 110720 136460 130080 124950 103550 119560 121830 139960 142060 83899 60529 87586 85347 101200 88993 90767 103820 115500 112010 138390 130310 127620 108690 122810 123260 133730 134710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 178110000 518 2326 496 939;940 777;778 778 1433 2 9606 Homo sapiens -0.04603943601921401 ADMETLQR Unmodified 962.44913 0.4491302 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 39.09 39.15 2 0.00014379 9240 20230619_1882_Aki_TMTPro18x_K_F3 174.27 144.7 141740 127770 139510 141020 163990 164940 156940 156660 179250 192540 216690 214580 212980 172140 184700 205760 234130 221680 131130 117060 142260 141700 168110 164870 159390 161560 182910 193290 220360 215390 216110 180800 191150 207060 223450 210430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 364170000 519 2326 496 941;942 779 779 1 9606 Homo sapiens -0.0335963973931257 ADMQNLVER Acetyl (Protein N-term) 1116.5234 0.52335778 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;Q01518-2;B4DNA3;B4DUZ8;Q5T0R2;Q5T0R1;Q5T0R4;Q5T0R3;Q5T0R5;Q5T0R6;Q5T0R7;Q5T0R9;Q5T0R8;Q5T0S3 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 1 0 0 1 0 1 51.088 51.088 2 1.1289E-08 14781 20230619_1880_Aki_TMTPro18x_K_F1 134.15 118.52 7149.4 7433.5 10505 10495 9351.2 11558 10766 11551 12699 10146 10010 12172 12783 9070.2 11449 10308 10739 12585 6647.8 6824.5 10377 10360 9844.6 11600 10837 11763 12717 10392 10534 12151 12882 9534.6 11620 10470 10295 11922 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223620000 520 2327 497 943 780 780 1 9606 Homo sapiens -0.030242966477771915 ADNFEYSDPVDGSISR Unmodified 1770.7697 0.7696723 1521 A0A3B3ITK7;P36871;B4DFP1;B7Z6C2;P36871-3;P36871-2;B4DDQ8 PGM1 Phosphoglucomutase-1 yes no 0 0 0 2 0 1 51.548 51.593 2 4.2229E-14 15148 20230619_1881_Aki_TMTPro18x_K_F2 228.17 205.29 24667 22270 24230 22936 21622 29041 23968 26731 24456 32982 30856 28476 34532 27036 29598 42606 35099 37409 22821 20391 24607 23204 22767 28847 24070 27616 25187 32845 31501 29096 34880 28768 30561 42229 33546 35578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61485000 521 1521 498 944 781 781 1 9606 Homo sapiens -0.08488175125739872 ADPDVLTEVPAALK Acetyl (Protein N-term) 1479.7821 0.78207489 3519 P29083;Q53F88;C9J329;Q05DN6;E9PER7 GTF2E1 General transcription factor IIE subunit 1 yes no 1 0 0 2.5 0.5 1 1 64.425 64.445 2 0.0032999 20568 20230619_1881_Aki_TMTPro18x_K_F2 50.284 34.081 13271 13417 14731 14974 14997 18798 15182 16400 17373 14965 16650 17035 18383 14432 15276 19875 19324 24968 12301 12289 14850 15048 15577 18661 15372 16878 17541 15268 17193 17123 18555 15275 15839 20151 18489 23640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57213000 522 3519 499 945;946 782 782 1 9606 Homo sapiens 0.061375130753049234 ADPDVLTEVPAALKR Acetyl (Protein N-term) 1635.8832 0.88318591 3519 P29083;Q53F88;C9J329;Q05DN6;E9PER7 GTF2E1 General transcription factor IIE subunit 1 yes no 1 0 1 4 0 1 61.485 61.488 2 1.4963E-10 18950 20230619_1883_Aki_TMTPro18x_K_F4 115.57 93.488 30040 24707 28840 31744 29734 31592 33516 33577 36330 35923 35549 31963 36103 33571 35835 33958 36536 33769 27768 22677 29427 31478 30906 32005 33665 34228 36828 36062 36517 32690 36835 34590 36471 34121 34932 32086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34981000 523 3519 500 947 783 783 1 9606 Homo sapiens 0.09067964778000714 ADPDVTLAGQEAIFILAR Unmodified 1899.0102 0.010177341 4581 Q9NR33 POLE4 DNA polymerase epsilon subunit 4 yes yes 0 0 0 6 0 1 64.634 64.678 3 4.217E-07 20209 20230619_1886_Aki_TMTPro18x_K_F6 116.96 99.584 28301 24217 27423 29674 28918 27756 25361 27387 30662 33823 27929 36223 33773 31400 31490 35246 36464 38721 26170 22214 27955 29496 29802 28222 25958 28179 30875 33904 29100 36461 34201 32745 32356 35542 34856 36733 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58962000 524 4581 501 948 784 784 1 9606 Homo sapiens 0.09663265932363174 ADPEAAWEPTEAEAR Unmodified 1641.7271 0.7270792 1535 B3KMZ6;B2RDF5;A0A3R5W301;Q9UBT2;Q9UBT2-2;K7EPL2;B7Z5X0 UBA2 SUMO-activating enzyme subunit 2 yes no 0 0 0 1 0 1 48.704 48.704 3 1.0425E-05 13842 20230619_1880_Aki_TMTPro18x_K_F1 112.96 100.54 21841 16772 22697 20487 15940 21007 19182 22175 30963 24995 26465 26621 28450 24722 25193 27286 26812 29315 20194 15390 22871 20402 17227 21223 19533 22641 30676 25174 27446 26888 28824 25701 25777 27488 25655 27813 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36296000 525 1535 502 949 785 785 1 9606 Homo sapiens -0.06811525463285761 ADPEELFTK Unmodified 1048.5077 0.50769094 2575 Q9Y6E0;Q5U0E6;Q9Y6E0-2;Q6P0Y1;B4DT57;B4DR80;B4DMR0;Q6FG81 STK24;HEL-S-95 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit yes no 0 0 0 3.25 0.829 1 1 2 56.27 56.291 3 0.0038891 16903 20230619_1882_Aki_TMTPro18x_K_F3 70.1 52.236 34198 31715 33021 38969 30133 42504 34927 36925 36856 48729 44722 43132 49995 42338 40310 54306 50309 56929 31639 29083 33645 38794 31730 42563 35021 38417 37815 48430 45727 44026 50402 44348 41792 54479 48084 54020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45710000 526 2575 503 950;951;952;953 786;787 786 2 9606 Homo sapiens -0.014622598931964603 ADPEVCCFITK Acetyl (Protein N-term) 1380.6054 0.60537285 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;Q7Z2W4-3 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 1 0 0 2.5 0.5 1 1 61.786 61.806 2 0.00042389 19173 20230619_1882_Aki_TMTPro18x_K_F3 84.213 69.069 70083 64156 63426 66719 58575 70077 79537 77160 83459 77682 65886 72346 89364 65595 65972 100120 88018 90176 64801 58745 64950 67260 61834 70784 79084 78349 84131 78317 69488 73492 89314 69754 68902 99385 84017 85747 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124440000 527 2740 504 954;955 788 788 1 9606 Homo sapiens -0.06970562350988985 ADPIVGSLEPGIYAGYFDWK Unmodified 2197.0732 0.073171528 63 B3KPN7;A0A024QZT2;Q96KP1;B4DZI7 EXOC2 Exocyst complex component 2 yes no 0 0 0 8 0 1 65.299 65.319 3 1.4257E-06 20066 20230619_1888_Aki_TMTPro18x_K_F8 97.32 87.905 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 528 63 505 956 789 789 1 9606 Homo sapiens 0.02251786929764421 ADPPPEESQAPQAQTAAAEAP Unmodified 2074.9443 0.9443422 1591 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A669KAV7;O95785-4;O95785-3;A0A2R8YFV2;O95785;B3KR89;O95785-2 WIZ Protein Wiz yes no 0 0 0 1 0 1 45.542 45.542 3 0.0068643 12517 20230619_1880_Aki_TMTPro18x_K_F1 60.564 55.673 15599 8559.1 12924 14785 11655 13077 17147 18384 18477 20492 21044 18034 20307 15333 19241 18538 18976 24450 14374 7898.8 13346 14393 12360 13464 17015 18464 18854 20509 21419 18334 20681 16099 19568 18907 18197 23140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27176000 529 1591 506 957 790 790 1 9606 Homo sapiens -0.05013219771171862 ADPSIVQALSLYDGLV Unmodified 1659.872 0.87195253 509 A0A024R8B2;P62166-2;P62166 FREQ;NCS1 Neuronal calcium sensor 1 yes no 0 0 0 6.5 0.5 1 1 68.649 68.681 2 0.00014023 21573 20230619_1887_Aki_TMTPro18x_K_F7 96.015 68.9 5670.4 3108.1 5260.2 4498.8 4930.5 4340.5 6037 4614.2 6082.1 6345.8 7831.9 4654.8 6872.2 4702.3 4471.8 7747.6 6476.2 7307.7 5229.3 2861.9 5367.1 4428.6 5167.8 4225.3 6023.2 4744.4 6260.5 6269.7 7885.2 4820.1 6922.8 5017.1 4719 7700.3 6182.8 6942.5 2 2 2 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 22043000 530 509 507 958;959 791;792 792 2 9606 Homo sapiens 0.0684114268385656 ADPSQFELLK Unmodified 1146.5921 0.59208927 1408 B1AXG1;P51812;A0A384MDW3;B7ZB17;B4DG22;B4DKZ2;Q15349-2;Q15349-3;Q15349;F2Z2J1;D6RE03;D6RA62;B1AXG2;A0A2R8YGB7 RPS6KA3;RPS6KA2 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-2;Ribosomal protein S6 kinase yes no 0 0 0 6 0 1 58.297 58.366 3 0.00020127 17422 20230619_1886_Aki_TMTPro18x_K_F6 118.4 60.911 32832 31039 30998 30432 25791 27045 33157 32446 34740 41856 42581 34950 41952 37876 38377 48264 41930 41716 30374 28404 31559 30773 27387 27757 33069 33024 35639 41575 43240 35935 42680 39511 39339 47940 40083 39692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28198000 531 1408 508 960 793 793 1 9606 Homo sapiens 0.024656909235773128 ADQCYEDVR Unmodified 1154.4662 0.46623683 373 A0A024R611;P31146;Q59G88;H3BRY3;H3BTU6;H3BRJ0;H3BNA2;H3BU76;B4DJS1;H3BSL1 CORO1A Coronin;Coronin-1A yes no 0 0 0 1 0 1 36.28 36.28 2 0.00056714 8468 20230619_1880_Aki_TMTPro18x_K_F1 131.22 107.07 67955 44698 75139 70060 80051 91752 75430 72173 86266 86862 113970 121030 109870 108710 106090 67783 137640 117460 62814 41158 75772 68918 82655 90645 76700 75498 88351 88065 115500 120780 112200 110370 109450 71705 131250 111110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102780000 532 373 509 961 794 794 1 9606 Homo sapiens -0.10481763924167353 ADQDRLDLEER Unmodified 1358.6426 0.64262129 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709;Q68EN4 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 1 1 0 1 37.969 37.969 2 0.039326 9188 20230619_1880_Aki_TMTPro18x_K_F1 87.001 61.062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 533 1432 510 962 795 795 1 9606 Homo sapiens -0.02235431489361872 ADQDRLDLEERK Unmodified 1486.7376 0.73758431 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709;Q68EN4 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 2 3 0 1 38.492 38.546 4 0.081144 9012 20230619_1882_Aki_TMTPro18x_K_F3 46.069 30.524 29417 20176 35974 34268 58947 46166 39371 55563 34292 27486 42640 44703 28714 33644 44977 27267 43581 37103 27224 18595 36305 33603 58700 46010 40733 55304 35531 29774 42796 44231 30579 34688 45271 28120 41667 35160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15764000 534 1432 511 963 796 796 1 9606 Homo sapiens 0.013685019818240107 ADQEEQIHPR Unmodified 1221.5738 0.57381344 3999 Q53GG0;Q9UHB6;Q9UHB6-4;F8VRN8;F8VTU2 LIMA1 LIM domain and actin-binding protein 1 yes no 0 0 0 1 0 1 29.632 29.632 3 5.9159E-27 5843 20230619_1880_Aki_TMTPro18x_K_F1 242.49 210.65 9674.9 5961 7687.4 8853.2 10738 13059 11033 11610 11392 8016.4 12912 14630 13811 13610 12100 8534.9 17208 13046 8917.1 5487 8030.2 8752.3 10933 12843 11118 11864 11628 8502.5 13227 14511 14002 13797 12592 8926.8 16387 12358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13075000 535 3999 512 964 797 797 1 9606 Homo sapiens -0.02811050998434439 ADQELMTYSHDNIICGITSVSFSK Unmodified 2715.252 0.25201688 1179 B2R6K4;A0A140VJJ8;P62873;F6X3N5;A0A2L0WW42;P62873-2;A0A994J3T6;Q71UM6;B3KVK2;Q71UM7 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes no 0 0 0 8 0 1 62.381 62.406 3 2.1451E-13 18803 20230619_1888_Aki_TMTPro18x_K_F8 130.65 121.23 66338 54803 59154 70831 42180 52129 63205 61500 59897 73215 73541 80648 77740 68611 71874 88759 81058 88605 61289 50303 60511 69966 45758 54338 62440 62539 61798 73545 75053 81123 78950 72220 73793 88810 77519 84132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 319700000 536 1179 513 965 798 798 1 9606 Homo sapiens -0.03699904346740368 ADQFEYVMYGK Unmodified 1349.5962 0.59618837 2758 C9JLU1;P52434;P52434-4;P52434-3 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes no 0 0 0 6 0.816 1 1 1 59.777 59.831 3 0.0025792 18048 20230619_1886_Aki_TMTPro18x_K_F6 75.479 66.966 238580 195520 224600 243110 210390 260700 251500 240560 269520 235570 234930 217020 250710 205980 270820 260430 227680 246410 220510 179400 229260 241820 221000 261750 251760 247070 272100 237870 243340 220930 256240 215760 272610 260100 218390 234120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199400000 537 2758 514 966;967;968 799;800 799 2 9606 Homo sapiens -0.06462587645046369 ADQFLVGTSR Unmodified 1092.5564 0.55637247 4548 Q9HC35;B5MBZ0;Q9HC35-2 EML4 Echinoderm microtubule-associated protein-like 4 yes no 0 0 0 7 0.816 1 1 1 47.87 47.946 2 1.9431E-05 12620 20230619_1887_Aki_TMTPro18x_K_F7 160.77 123.22 467560 353170 383590 409040 366460 414640 340490 347070 449520 526750 530250 537830 530270 448630 462610 598900 575070 565180 431490 323930 396440 408600 381840 417450 348470 364120 455440 523000 540180 542450 538040 473620 478570 597130 549070 537210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 434310000 538 4548 515 969;970;971 801 801 1 9606 Homo sapiens 0.013796534665516447 ADQIETQQLMR Oxidation (M) 1347.6453 0.64526383 2224 Q9H4M9;B2R5U3;A0A024R571;B4DMV9;B4DR44;B4DTR4;B4DZH9;C9J2Z4;C9JC03;Q9NZN3;C9JDQ8 EHD1;EHD3 EH domain-containing protein 1;EH domain-containing protein 3 yes no 0 1 0 3 0 1 40.634 40.693 2 0.031497 9919 20230619_1882_Aki_TMTPro18x_K_F3 66.595 51.905 23338 19361 21078 25981 31169 30435 30095 26495 35677 35013 38364 46609 36145 31987 37198 46022 46375 49032 21564 17778 21780 25737 31527 30356 30562 27583 36139 35279 39199 46276 37032 34208 38364 46159 44301 46530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33780000 539 2224 516 972 802 802 1384 1 9606 Homo sapiens -0.014652993560957839 ADQLCQQELR Unmodified 1259.5928 0.59283433 2433 B3KWQ6;P41219;P41219-2 PRPH Peripherin yes no 0 0 0 2.5 1.12 1 1 1 1 40.756 40.799 2 1.506E-06 10191 20230619_1881_Aki_TMTPro18x_K_F2 172.27 137.89 676120 517640 578020 592960 533850 568950 587460 590610 725370 734550 829090 866400 855140 774990 773730 970110 831570 921290 624190 474710 594660 592580 559760 577900 593760 605870 735300 738660 847100 870720 868370 812340 792550 968440 795710 875240 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3056899999.9999995 540 2433 517 973;974;975;976 803;804;805;806 803 4 9606 Homo sapiens -0.026578376990300967 ADQLDYENFR Unmodified 1269.5626 0.56258006 4259 Q8NI27;A0A0C4DG98;H0Y815;Q6P441 THOC2 THO complex subunit 2 yes no 0 0 0 2 0 1 49.01 49.075 2 0.031745 14006 20230619_1881_Aki_TMTPro18x_K_F2 68.836 45.313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 541 4259 518 977 807 807 1 9606 Homo sapiens -0.06141873092587957 ADQLTEEQIAEFK Acetyl (Protein N-term) 1562.7464 0.74641766 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;Q9BRL5;M0QZ52;G3V479;F8WBR5 CALM3;CALM1;CALM2 yes no 1 0 0 2.71 1.03 1 2 2 2 62.82 62.833 2;3 5.6722E-16 19543 20230619_1883_Aki_TMTPro18x_K_F4 134.68 116.94 777390 687110 704600 813240 550190 667890 757850 764790 766430 925150 883900 892030 972470 1276300 326430 1452900 338060 1085000 718630 629980 720230 809190 589780 688670 752730 779130 785750 925590 904270 921270 961760 1310500 350690 1433300 328520 1031700 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 22870000000 542 2325 519 978;979;980;981;982;983;984 808;809;810;811;812 812 5 9606 Homo sapiens -0.012445691723996788 ADQQYECVAEIGEGAYGK Unmodified 1986.8629 0.86292076 3773 Q00534 CDK6 Cyclin-dependent kinase 6 yes yes 0 0 0 3.5 1.12 1 1 1 1 55.977 56.009 3 1.5083E-18 16781 20230619_1882_Aki_TMTPro18x_K_F3 171.29 160.04 97189 90037 99257 114950 82277 81295 85003 80490 74755 137550 117800 112450 135760 111380 98992 148740 132630 131120 89958 82599 100460 113580 86760 84803 85337 83881 78774 135090 119550 115270 136220 116920 103440 147730 126560 124730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 423260000 543 3773 520 985;986;987;988 813;814 814 2 9606 Homo sapiens -0.0910361873477541 ADQSFTSPPPR Unmodified 1201.5728 0.57275081 2237 D6RHW1;D6RIY1;D6RGK3;D6RIV9;D6RIE8;B2R6H6;Q9HBM6;Q16594 TAF9;TAF9B Transcription initiation factor TFIID subunit 9B;Transcription initiation factor TFIID subunit 9 yes no 0 0 0 5 0 1 38.099 38.191 2 5.861E-07 8771 20230619_1885_Aki_TMTPro18x_K_F5 140.49 118.25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 544 2237 521 989 815 815 1 9606 Homo sapiens -0.019972653673448804 ADRDESSPYAAMLAAQDVAQR Oxidation (M) 2280.0441 0.044073019 1363 A0A2R8Y811;P62263;E5RH77 RPS14 40S ribosomal protein S14 yes no 0 1 1 3.5 0.5 1 1 44.879 44.938 3 2.0084E-11 11654 20230619_1883_Aki_TMTPro18x_K_F4 132.67 122.4 130790 101710 93583 152420 104660 128700 122490 129180 167270 148150 154990 188240 199660 158090 139330 234960 198240 257860 120610 93533 98699 149300 108590 131870 123830 132520 167370 149960 161700 188310 199490 168200 146540 235810 189520 244460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 370040000 545 1363 522 990;991 816;817 817 857 2 9606 Homo sapiens -0.04474725428826787 ADRDESSPYAAMLAAQDVAQR Unmodified 2264.0492 0.049158397 1363 A0A2R8Y811;P62263;E5RH77 RPS14 40S ribosomal protein S14 yes no 0 0 1 4.5 1.12 1 1 1 1 52.548 52.607 3 1.0598999999999999E-66 15049 20230619_1886_Aki_TMTPro18x_K_F6 301.48 278.65 197920 158550 187750 203480 160590 220150 197160 207970 245400 282820 239320 289480 340860 288030 213270 406550 348060 406400 182910 145530 191310 202000 170380 220960 198240 215270 247390 282010 250470 293570 338750 303460 227640 405970 332120 385790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2030699999.9999998 546 1363 522 992;993;994;995 818;819;820 820 3 9606 Homo sapiens -0.03230421566240693 ADRESRYEEEEEQSR Unmodified 1911.8195 0.81947604 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 2 1 0 1 28.776 28.776 4 6.9806E-25 5499 20230619_1880_Aki_TMTPro18x_K_F1 220.59 197.76 10690 8568.5 7662 8011.3 10846 9135.3 8575.6 11278 10958 11858 12197 12097 12963 11801 10359 21243 20545 15063 9860.1 7842.9 8079.7 8161.4 10943 9214.8 8859.9 11377 11088 11955 12485 12285 13102 12667 11200 20814 19521 14392 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26241000 547 4746 523 996 821 821 1 9606 Homo sapiens -0.09996092187680006 ADSAVSQEQLR Unmodified 1202.5891 0.58912916 1004 A0A0C4DGG1;B4DUI2;D3DQR0;Q9UKS6;E9PIY1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes no 0 0 0 2.5 0.5 1 1 36.829 36.885 2 6.2727E-08 8319 20230619_1882_Aki_TMTPro18x_K_F3 195.27 144.2 23624 16427 17127 21793 28192 26869 24269 22796 27412 26985 34118 32921 35069 26719 25768 18435 40984 32749 21774 15093 18128 21621 28288 26700 24788 23688 28015 27231 34709 32914 35306 27363 27157 19488 39009 30984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44224000 548 1004 524 997;998 822 822 1 9606 Homo sapiens -0.004061842012333727 ADSELQLVEQR Acetyl (Protein N-term) 1328.6572 0.65720872 3401 P07741;H3BQZ9;P07741-2;H3BQF1;H3BSW3;Q12898 APRT Adenine phosphoribosyltransferase yes no 1 0 0 1.5 0.5 1 1 54.958 54.968 2 3.0874999999999997E-23 16430 20230619_1880_Aki_TMTPro18x_K_F1 181.41 172.58 448880 363330 523560 503570 376830 459150 466180 384110 493710 598740 510320 519580 560950 546340 448890 698360 612180 652000 415610 333770 523320 496370 405520 465850 465890 403740 502750 591260 525010 532010 566250 570440 468860 695980 584430 619620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 901260000 549 3401 525 999;1000 823 823 1 9606 Homo sapiens 0.006026406587579913 ADSEWRR Unmodified 918.43078 0.43077802 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 1 3 0.816 1 1 1 30.101 30.178 3 0.0077052 5646 20230619_1883_Aki_TMTPro18x_K_F4 100.45 63.43 173590 144390 177430 174490 238370 201700 190780 215310 222970 169110 193280 187220 200090 160200 223660 156720 254120 186170 160560 132440 180720 174170 241040 202370 196190 217700 224050 173980 200050 188340 205110 166050 228280 159430 242380 176770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67915000 550 3609 526 1001;1002;1003 824;825 825 2 9606 Homo sapiens -0.03170013598992227 ADSGLLLK Acetyl (Protein N-term) 857.48583 0.48583328 4056 Q5SY16 NOL9 Polynucleotide 5'-hydroxyl-kinase NOL9 yes yes 1 0 0 4 0 1 59.733 59.735 2 0.0032855 18217 20230619_1883_Aki_TMTPro18x_K_F4 45.718 35.304 39070 32379 36528 40186 37309 42436 37489 39916 41835 39295 39554 46057 46172 37151 37374 51690 49412 51509 36111 29707 37349 39969 38717 42681 37942 40939 42295 39950 41019 46150 46496 39389 38903 51652 47175 48918 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23992000 551 4056 527 1004 826 826 1 9606 Homo sapiens 0.05138980148910832 ADSGTAGGAALAAPAPGPGSGGPGPR Acetyl (Protein N-term) 2158.0403 0.04030827 4331 Q96C90 PPP1R14B Protein phosphatase 1 regulatory subunit 14B yes yes 1 0 0 4 0 1 47.425 47.467 3 1.4024E-20 12821 20230619_1883_Aki_TMTPro18x_K_F4 58.938 53.807 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 552 4331 528 1005 827 827 1 9606 Homo sapiens 0.007609728595525667 ADSINKPFAQQCQDLVK Unmodified 1960.9677 0.9676606 1705 Q9NXE4-4;Q9NXE4-6;A0A7P0T9J6;A0A7P0TB24;Q9NXE4-8;Q9NXE4-2;Q9NXE4 SMPD4 Sphingomyelin phosphodiesterase 4 no no 0 0 1 8 0 1 51.164 51.241 3 5.7236E-09 14051 20230619_1888_Aki_TMTPro18x_K_F8 123.4 109.09 61699 51630 58247 60187 52870 65269 60345 62079 61110 74670 71072 59504 74167 55141 65554 72204 60651 56827 57033 47339 59393 60160 55596 65537 60473 63962 62683 74301 72508 60983 75113 57954 66578 71413 58051 54152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58555000 553 1705 529 1006 828 828 1 9606 Homo sapiens 0.02561547532422992 ADSLLAVVK Unmodified 914.54368 0.54368251 2020;3876 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;Q14151;A0PJ47 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 0 4.5 3.5 1 1 59.425 59.467 2 1.5604E-06 18243 20230619_1880_Aki_TMTPro18x_K_F1 135.83 69.326 159990 145930 145040 147070 186280 232240 182310 176190 244550 71519 63909 40408 54330 42096 118480 63248 62799 39671 147930 133590 149250 149590 190470 227050 185780 181030 237870 77344 73625 42677 58820 44499 115960 62084 60464 38014 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52189000 554 2020;3876 530 1007;1008 829;830 829 2 9606 Homo sapiens 0.08299242074338053 ADSLVEGTSSR Unmodified 1120.536 0.53603095 4223 Q8N1G2;Q5T7F5 CMTR1 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 yes no 0 0 0 2 0 1 39.35 39.419 2 0.032764 9539 20230619_1881_Aki_TMTPro18x_K_F2 74.841 62.314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 555 4223 531 1009 831 831 1 9606 Homo sapiens -0.01941561983903739 ADSVVVLLCR Unmodified 1130.6118 0.61177885 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A8A5YP40;A0A994J773;A0A8A5YP91;A0A8A5YQV3;A0A8A5YNF9;A0A8A5YNG5;A0A994J597;A0A8A5YPS5 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 1 0 1 57.816 57.816 2 0.0027634 17601 20230619_1880_Aki_TMTPro18x_K_F1 104.01 86.165 84627 73780 86524 91745 84475 84175 93258 80881 93783 103110 94403 94694 96943 94299 94679 123060 111540 108730 78299 67681 87725 91082 88043 85660 93538 83511 95618 102760 96964 96533 98859 98740 97405 122310 106540 103430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201050000 556 462 532 1010 832 832 1 9606 Homo sapiens 0.05169743662668225 ADTALASIPPVAEGK Unmodified 1438.7668 0.76675917 3785 Q01804-5;Q01804-3;Q01804 OTUD4 OTU domain-containing protein 4 yes no 0 0 0 6 0 1 56.087 56.161 3 0.00067677 16531 20230619_1886_Aki_TMTPro18x_K_F6 81.619 61.238 38900 32691 31594 39659 33928 37495 34337 36563 41489 44040 44657 43209 43845 43079 45965 48460 57411 57227 35920 29986 32781 39444 35098 38065 34833 37621 42008 44084 45633 43908 44929 44719 47347 49092 54818 54262 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27182000 557 3785 533 1011 833 833 1 9606 Homo sapiens 0.06492646278070424 ADTEEEFLAFR Unmodified 1326.6092 0.6091959 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 1.5 0.5 1 1 58.054 58.062 2 1.635E-06 17843 20230619_1881_Aki_TMTPro18x_K_F2 166.34 150.77 61623 43802 51742 59203 33951 54447 49700 45119 69412 64190 61460 62851 75171 64543 52874 71018 61486 64522 56859 40248 53176 58436 37294 55159 49811 47288 69275 63856 64010 63915 75233 66855 54734 70855 58767 61341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67510000 558 3588 535 1012;1013 834 834 1 9606 Homo sapiens -0.04104433261295526 ADTFPQVLK Unmodified 1017.5495 0.54949617 224 Q8IV48;A0A024R355 ERI1;THEX1 3'-5' exoribonuclease 1 yes no 0 0 0 7.5 0.5 1 1 54.804 54.867 2;3 0.00031389 15642 20230619_1888_Aki_TMTPro18x_K_F8 125.82 74.939 23772 15310 21267 22361 20041 26441 23987 22076 28755 26101 25315 26705 29119 28518 24179 31402 28808 29301 21933 14087 21806 22045 21066 26309 24100 22969 28887 26200 26308 27147 29396 29490 24969 31375 27522 27851 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8972600 559 224 536 1014;1015 835;836 836 2 9606 Homo sapiens 0.04142340585997317 ADTLDPALLRPGR Unmodified 1393.7678 0.76776222 2016 A8K2M0;P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 1 7.5 0.5 1 1 48.418 48.495 3 9.9297E-11 12858 20230619_1888_Aki_TMTPro18x_K_F8 174.21 127.02 216150 173770 209470 233090 204660 252190 245690 253270 282480 262700 253730 268900 314190 235900 249370 283830 283770 294630 199800 159580 213470 230730 214310 253480 246500 258900 284590 265190 264390 271550 315480 247140 256800 284960 271260 279680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 531940000 560 2016 537 1016;1017 837 837 1 9606 Homo sapiens 0.08662905437631707 ADTLGELDLER Unmodified 1230.6092 0.6091959 805 E9KL42;A0A087WT95;Q86TX2;P49753;G3V4F2;B7ZMC1;B4DV16;A1L172 ACOT2;ACOT1 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial yes no 0 0 0 1.5 0.5 1 1 53.866 53.88 2 2.24E-06 16142 20230619_1881_Aki_TMTPro18x_K_F2 164.97 95.373 69664 54072 59563 66998 63142 81363 83724 78350 102900 90427 92069 91289 100630 90267 90337 106120 105640 101730 64318 49622 61477 66782 65994 81080 83770 80570 103280 90815 95340 92630 101990 93960 92971 106100 100900 96684 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73051000 561 805 538 1018;1019 838 838 1 9606 Homo sapiens 0.003115667387191934 ADTLTLEER Unmodified 1046.5244 0.52440364 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;A0A0S2Z5W9;Q9UHD8-4;Q9UHD8-8;Q9UHD8-9;A0A6Q8PHC2;K7EL40 SEPT9 Septin-9 yes no 0 0 0 1.5 0.5 1 1 43.805 43.846 2 4.3398E-17 11769 20230619_1880_Aki_TMTPro18x_K_F1 246.37 189.09 807870 635800 721760 745170 774700 826610 855450 841870 1074600 961270 1116000 1065800 1109200 914590 970500 1196100 1216400 1077200 746170 583130 741280 744860 802960 830250 864600 862190 1083500 968500 1142200 1072800 1125800 963140 1004100 1190200 1160500 1024900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 984590000 562 541 539 1020;1021 839;840;841 839 3 9606 Homo sapiens 0.003002409927375993 ADTLTLK Unmodified 760.43307 0.43306943 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;C9J2Q4;H7C2Y0 SEPT2 Septin-2 yes no 0 0 0 6.5 0.5 1 1 47.986 48.07 2;3 0.007192 13077 20230619_1886_Aki_TMTPro18x_K_F6 127.12 27.051 461470 367040 428880 469160 535650 560910 526020 520270 652000 589860 664980 684080 683060 579450 576490 664580 808170 716210 426380 336910 440210 466540 547690 559350 534770 536180 657460 595430 682440 686620 691730 605700 601300 669130 770380 680050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 274920000 563 3910 540 1022;1023 842;843 842 2 9606 Homo sapiens 0.043270220860904374 ADTLTPEECQQFK Unmodified 1565.7032 0.70317264 1949 Q8TC62;E7EPK1;A4GYY8;Q3LIE9;Q16181;Q16181-2;E7ES33;B4DUD6;B4DNE4;A8K3D0;A0A024RA87;A0A023T695;G3V1Q4;B4DPQ6;Q59EY4;Q3B7A3;A0A0U1RRE1 SEPT7;DKFZp686F17268;Nbla02942 Septin-7 yes no 0 0 0 3.5 1.12 1 1 1 1 49.408 49.47 3 8.0821E-11 13867 20230619_1882_Aki_TMTPro18x_K_F3 172.13 152.55 504340 375360 493660 505740 435540 589850 570050 497350 611150 659010 602510 632280 736890 598960 560030 803930 725670 757330 466000 344830 501750 501000 461440 587610 568150 518990 620400 656640 624550 642070 739390 629900 583090 801200 692930 719690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1255300000 564 1949 541 1024;1025;1026;1027 844;845;846 845 3 9606 Homo sapiens -0.057050822213341235 ADTLTPEECQQFKK Unmodified 1693.7981 0.79813565 1949 Q8TC62;E7EPK1;A4GYY8;Q3LIE9;Q16181;Q16181-2;E7ES33;B4DUD6;B4DNE4;A8K3D0;A0A024RA87;A0A023T695;G3V1Q4;B4DPQ6;Q59EY4;Q3B7A3;A0A0U1RRE1 SEPT7;DKFZp686F17268;Nbla02942 Septin-7 yes no 0 0 1 5.5 0.5 1 1 46.852 46.932 3 2.7515E-05 12446 20230619_1885_Aki_TMTPro18x_K_F5 111.39 87.557 348780 355750 383830 361820 410510 390630 406030 412290 381000 483440 486290 436750 453310 356670 471430 469790 452550 352150 323270 325570 387170 365620 423430 393710 409140 421500 394260 483020 492330 442910 464250 376510 477990 463790 432480 336090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 303670000 565 1949 542 1028;1029 847;848 847 2 9606 Homo sapiens -0.02101148750170978 ADTNLGNILLNVLIPPNMPCTR Oxidation (M) 2451.2614 0.26139978 312 A0A024R4X7;Q9UKX7-2;Q9UKX7;B4E2D3 hCG_1989366;NUP50 Nuclear pore complex protein Nup50 yes no 0 1 0 5 0 1 66.192 66.235 3 0.019521 20654 20230619_1885_Aki_TMTPro18x_K_F5 45.735 33.072 4840.2 2701.3 4368.1 5329.2 4699.9 4542.6 4368.9 6159.3 5298.3 5541.3 5886.9 7680.2 6835.9 4654.1 5042.8 7305.4 6496.5 6317.5 4463.1 2497.6 4485.6 5152 4844.3 4687.1 4459.5 6160.8 5372 5691.6 6063.6 7594 6854.5 5042 5252.1 7236.5 6200.6 6011.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14254000 566 312 543 1030 849 849 190 1 9606 Homo sapiens 0.0938195352018738 ADTNLGNILLNVLIPPNMPCTR Unmodified 2435.2665 0.26648516 312 A0A024R4X7;Q9UKX7-2;Q9UKX7;B4E2D3 hCG_1989366;NUP50 Nuclear pore complex protein Nup50 yes no 0 0 0 5.5 0.5 1 1 66.866 66.908 3 1.8602E-23 21107 20230619_1886_Aki_TMTPro18x_K_F6 181.85 170.21 8399.1 8306.7 7945.1 8960.1 7404.2 9036.7 8872.1 8090.8 8149.4 8223.8 9419.8 9290.8 10878 7875.8 8007.2 10048 9686.5 15455 7773.1 7606.6 8107.9 8997.9 7777.2 9112 8839.9 8340.3 8394.4 8336.1 9665.9 9339.9 10910 8302 8298.8 10355 9291.7 14601 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32587000 567 312 543 1031;1032 850;851 851 2 9606 Homo sapiens 0.10626257382818949 ADTQTYQPYNK Unmodified 1327.6044 0.60444487 392 P84090;A0A024R6D4 ERH Enhancer of rudimentary homolog yes no 0 0 0 6 0.816 1 1 1 42.253 42.342 2 1.0478E-16 10478 20230619_1886_Aki_TMTPro18x_K_F6 228.64 189.34 132090 70297 120070 159210 155640 223720 163630 182490 248260 214860 259220 302820 293340 259160 216430 265450 349050 327600 121780 65167 123830 154040 159670 220050 167120 190080 248430 218210 267100 301810 294850 269090 229000 269990 332540 310580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 559550000 568 392 544 1033;1034;1035 852;853 852 2 9606 Homo sapiens -0.04625317404043017 ADTTTPTTSAITASR Unmodified 1492.7369 0.73691561 517 A0A024R8H6;Q15059;A0A140F1N4;Q15059-2 BRD3 Bromodomain-containing protein 3 yes no 0 0 0 5 0 1 39.516 39.606 2 0.03579 9381 20230619_1885_Aki_TMTPro18x_K_F5 82.171 50.985 8578.6 4734.3 6056.4 7726.3 5575.9 9265.7 7215.1 6046.9 8677.9 8823.2 12155 10441 11894 9906.5 7539.9 14429 14356 14199 7896.9 4365.5 6368.8 7567 5907.4 9167 7224.9 6480.4 8889.5 8823.2 12276 10526 11945 10475 8158.2 14391 13669 13489 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37502000 569 517 545 1036 854 854 1 9606 Homo sapiens 0.010256625420652199 ADVDVQPYAFTTK Unmodified 1453.7089 0.70890994 2806 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;Q9BZE4-2;B4DHR2;Q9BZE4-3;O60747 GTPBP4 Nucleolar GTP-binding protein 1 yes no 0 0 0 5 0 1 55.479 55.543 3 0.030042 16075 20230619_1885_Aki_TMTPro18x_K_F5 50.806 34.915 164270 129900 140820 184640 161530 182750 175430 172590 191340 196290 195620 192500 218320 181910 192220 217130 198730 213410 151680 119370 145590 181820 166610 184660 176560 177700 194290 197000 201480 195280 220820 189890 196420 217360 190180 202690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86896000 570 2806 546 1037 855 855 1 9606 Homo sapiens 0.0002038435263784777 ADVDVSGPK Unmodified 886.43961 0.43961137 3815 Q09666;Q8N274 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 4 0 1 41.797 41.84 2 0.022429 10337 20230619_1883_Aki_TMTPro18x_K_F4 85.676 42.649 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 571 3815 547 1038 856 856 1 9606 Homo sapiens -0.008150847531737782 ADVEEEFLALRK Unmodified 1418.7405 0.74054442 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 1 4.5 0.5 1 1 57.492 57.523 3 0.00074404 16886 20230619_1885_Aki_TMTPro18x_K_F5 92.295 65.542 91872 73780 75112 87044 49271 69772 62693 73512 92428 100320 98926 80593 105350 87344 75233 121640 99716 95106 84813 67666 77377 86600 53813 71938 63431 75552 92775 99358 101290 83057 105890 91679 78642 120060 95139 90630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 267410000 572 3588 548 1039;1040 857 857 1 9606 Homo sapiens 0.04792377106605272 ADVEEESLALR Unmodified 1230.6092 0.6091959 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 1 0 1 48.298 48.298 2 9.3036E-12 13664 20230619_1880_Aki_TMTPro18x_K_F1 195.79 135.35 50624 29496 39779 45465 26181 38663 35670 36472 50761 55519 58094 50893 70320 54187 34466 66541 57630 57345 46644 27170 41145 44490 28662 39525 35910 37935 51173 54961 59683 52029 69649 56459 37134 66060 54914 54565 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43735000 573 3588 549 1041 858 858 1 9606 Homo sapiens 0.00311566738696456 ADVEGELLACR Unmodified 1231.5867 0.58668632 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 2 0 1 50.926 50.971 2 5.6582E-17 14874 20230619_1881_Aki_TMTPro18x_K_F2 189.18 156.96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 574 3588 550 1042 859 859 1 9606 Homo sapiens -0.019843559305627423 ADVFPGNDSTASQDVANR Acetyl (Protein N-term) 1904.85 0.85004788 3184 Q2TSD3;L7RSM7;P17252;B0LPH5;J3KRN5 PRKCA Protein kinase C;Protein kinase C alpha type yes no 1 0 0 1 0 1 51.716 51.716 2 4.3205E-30 15044 20230619_1880_Aki_TMTPro18x_K_F1 213.38 198.96 4374.9 3070.2 5609.2 3731 5068.6 5755.4 6815.8 4408.5 6542.8 6029.2 4693.3 5046.1 7567.7 5658.5 6198.7 7984.1 6518.3 6645.1 4051.2 2818.2 5577.7 3743.4 5349.3 5635.5 6756 4644.2 6611.4 5981.9 5032.2 5190.7 7563.4 5942.5 6354.7 7905.4 6234.5 6325.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54184000 575 3184 551 1043 860 860 1 9606 Homo sapiens -0.06618313802641751 ADVIPVHYYLIPPPTK Unmodified 1822.0029 0.0029071185 1552 A0A494C1B8;P29144;B7Z920;A0A494C0U1 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 3 0 1 59.987 60.016 3 0.00034627 18474 20230619_1882_Aki_TMTPro18x_K_F3 68.257 55.897 19322 17800 17262 15984 16722 14796 20933 18245 21384 17200 20079 16467 18869 15499 21547 18689 20522 16740 17865 16279 17689 16302 17496 15156 20870 18381 21687 17422 20594 16737 19419 16189 21790 18632 19619 15934 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4472300 576 1552 552 1044 861 861 1 9606 Homo sapiens 0.12478578122545514 ADVIQATGDAICIFR Unmodified 1648.8243 0.82429083 315 A0A024R4Z6;Q08945;E9PMD4 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 8 0 1 62.815 62.84 3 9.3424E-26 18998 20230619_1888_Aki_TMTPro18x_K_F8 192.46 164.25 113370 111870 133980 130030 101120 132260 141540 136700 129780 144500 147600 142660 167500 135220 153290 173980 166600 175540 105120 102510 133910 129910 108750 133650 140070 139580 133650 145520 151470 144750 169600 141830 156980 174230 159330 166680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209520000 577 315 553 1045 862 862 1 9606 Homo sapiens 0.025831652119904902 ADVLSEEAILK Unmodified 1186.6445 0.64451877 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;B5MCE7;E9PFD4 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 0 3.67 0.471 1 2 58.792 58.804 2;3 1.7773E-12 17935 20230619_1882_Aki_TMTPro18x_K_F3 247.51 169 196190 166170 180790 178590 169450 194530 218610 227110 224820 247360 234500 234760 258320 213640 218470 276490 241530 272880 181340 152240 184790 179690 178270 196280 217810 230220 229220 248420 241180 238240 260960 224450 224470 276450 231090 259100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 938590000 578 607 554 1046;1047;1048 863;864 863 2 9606 Homo sapiens 0.05866229266530354 ADVQSIIGLQR Unmodified 1198.667 0.66698555 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 4.5 3.5 1 1 54.42 54.455 2 0.00010533 16177 20230619_1880_Aki_TMTPro18x_K_F1 137.46 93.651 348750 285580 319900 393940 332380 413130 385030 427230 530280 528400 500870 570390 607230 516870 446090 639950 605870 676280 322260 262320 328080 389030 346350 416420 389700 438070 531060 529900 520190 575200 608890 541500 466360 642530 578640 641690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 460500000 579 2263 555 1049;1050 865;866 865 2 9606 Homo sapiens 0.07559873454783883 ADVVESWIGEK Unmodified 1231.6085 0.60846762 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q14917;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 5 0 1 61.73 61.779 3 0.0013269 18683 20230619_1885_Aki_TMTPro18x_K_F5 87.667 58.327 372490 334660 382290 340190 347220 382730 385780 414280 460120 509090 491820 488860 528280 440370 438590 581500 500470 608350 344720 306400 386730 344050 364520 384710 389280 423380 466140 508680 504590 495670 533710 463470 451820 583110 478990 577130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 258440000 580 1022;3868 556 1051 867 867 1 9606 Homo sapiens 0.0019277208964467718 ADVVLPAR Unmodified 839.4865 0.48650199 4134 Q6UW63 KDELC1 KDEL motif-containing protein 1 yes yes 0 0 0 6 0 1 43.085 43.179 2 0.028354 10853 20230619_1886_Aki_TMTPro18x_K_F6 79.469 42.448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 581 4134 557 1052 868 868 1 9606 Homo sapiens 0.06033819588606093 ADVVVSGPK Unmodified 870.48108 0.48108226 3815 Q09666;Q8N274 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 6 0 1 43.973 44.065 2 1.5632E-06 11259 20230619_1886_Aki_TMTPro18x_K_F6 135.79 103.66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 582 3815 558 1053 869 869 1 9606 Homo sapiens 0.040660960061472906 ADWLSHYWMPK Unmodified 1432.6598 0.65979168 3409 P08243-2;P08243;P08243-3;B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 3 0 1 61.691 61.72 3 0.00015413 19115 20230619_1882_Aki_TMTPro18x_K_F3 115.18 84.737 64813 47076 55689 49286 34805 51294 45352 49098 60846 68884 66637 92883 75335 63603 87818 80078 70211 91761 59819 43146 56979 49665 38245 51661 45649 50845 61387 69253 68693 92100 77178 67443 88073 80884 67497 86953 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107400000 583 3409 559 1054 870 870 1 9606 Homo sapiens -0.03923182417292992 ADWWTNTAHYNR Unmodified 1533.6749 0.67492447 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 8 0 1 47.312 47.36 3 7.0896E-10 12407 20230619_1888_Aki_TMTPro18x_K_F8 179.98 171.39 41461 38774 44391 40847 45232 42779 44023 45660 48301 43586 39574 36235 39426 33067 43749 37546 41512 40180 38394 35505 44829 41143 46820 43216 44608 46382 48628 43939 41002 37013 40447 34469 44251 37828 39731 38140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33599000 584 1863 560 1055 871 871 1 9606 Homo sapiens -0.07056599295719934 ADYEIASK Unmodified 895.42871 0.42871234 4715;4568 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1;Q9NQ29-3;Q9NQ29;A8MYV2;Q1W6G4;Q53G47;Q9NQ29-2;B8ZZ12 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 no no 0 0 0 3.67 0.471 1 2 44.567 44.621 2;3 0.0027173 11551 20230619_1883_Aki_TMTPro18x_K_F4 133.58 83.992 575700 381850 575690 639220 701180 779980 667130 675890 771530 707960 914110 906290 870880 767280 752450 561790 1037900 978500 531700 351900 587090 625710 717630 775230 678030 698590 785360 719980 929060 905780 884890 785650 781810 591860 989930 925180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 575090000 585 4715;4568 561 1056;1057;1058 872;873 873 2 9606 Homo sapiens -0.023184871274793295 ADYNLTR Unmodified 851.41373 0.41373097 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32 VARS Valine--tRNA ligase yes no 0 0 0 4.5 0.5 1 1 37.646 37.715 2 0.009461 8616 20230619_1883_Aki_TMTPro18x_K_F4 119.29 82.896 547100 393660 533590 519660 615940 671740 611470 602510 718160 673850 791750 642480 686700 573330 681830 578910 791940 644770 505400 361610 544320 516420 633230 666080 620180 622060 728230 676400 803250 651590 703900 594220 698840 585780 755640 612250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 716110000 586 725 562 1059;1060 874;875 874 2 9606 Homo sapiens -0.017919342048230646 ADYSTVPPPSSGSAGGGGGGGGGGGVNDAFK Acetyl (Protein N-term) 2678.1845 0.1844659 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 1 0 0 3.5 0.5 1 1 55.179 55.206 3 8.465799999999999E-22 16386 20230619_1882_Aki_TMTPro18x_K_F3 118.55 115.45 40446 33410 37844 41659 32386 42115 46088 42987 40129 51109 49139 44081 48747 41511 48675 59272 51567 53866 37381 30655 38615 41401 34469 42558 45498 44080 41619 50978 49956 45020 49761 43844 49718 58940 49327 51211 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 195250000 587 2644;4322 563 1061;1062 876;877 876 2 9606 Homo sapiens -0.08749894961692917 ADYTSHLR Unmodified 961.46174 0.4617438 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 6 0.816 1 1 1 33.323 33.394 3 8.4912E-06 6939 20230619_1885_Aki_TMTPro18x_K_F5 190.26 111.65 76978 61259 76004 79885 94086 100760 91332 94444 109570 98441 118530 112710 110050 100310 98890 113680 126740 111230 71160 56242 77583 79409 96222 100150 92823 97005 110890 99735 120760 113400 112120 104540 102370 113850 120890 105730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135840000 588 2863 564 1063;1064;1065 878;879 878 2 9606 Homo sapiens -0.020528602847548427 AEAALLLLPEAAAER Acetyl (Protein N-term) 1578.8617 0.86172219 2487 B4DH72;Q96JB2-2;Q96JB2 COG3 Conserved oligomeric Golgi complex subunit 3 yes no 1 0 0 2 0 1 67.133 67.14 2 3.3887E-10 21655 20230619_1881_Aki_TMTPro18x_K_F2 116.54 79.518 3238.5 2141.9 1807.1 2558.1 2090.6 1977.8 2453.6 3704.5 2315 2193.3 2445.5 3542.8 2414.1 2445 3347.3 2325.2 2398.3 2792.1 2980 1966.2 1963.1 2543.1 2159.3 2084 2451.6 3621.8 2371 2334.3 2511.7 3494.5 2510.7 2549.5 3329.4 2368.6 2306.5 2645.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6332400 589 2487 565 1066 880 880 1 9606 Homo sapiens 0.09544579749308468 AEACFVNCVER Unmodified 1353.5806 0.58055508 3271 O60220 TIMM8A Mitochondrial import inner membrane translocase subunit Tim8 A yes yes 0 0 0 4 0 1 46.559 46.602 2 2.5215E-06 12431 20230619_1883_Aki_TMTPro18x_K_F4 164.33 153.58 69404 55468 58652 65384 77235 87092 76505 71877 87499 76407 76092 81130 88100 70507 69684 86553 77295 87847 64085 50872 60802 65490 78787 86071 77489 74604 88068 77158 79153 81784 88636 73951 71700 86742 73955 83385 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67724000 590 3271 566 1067 881 881 1 9606 Homo sapiens -0.08209197433711779 AEACGTLCR Unmodified 1036.443 0.44299897 4197 Q86X10-4;Q86X10-3;Q86X10;A2A2F0;Q86X10-2 RALGAPB Ral GTPase-activating protein subunit beta yes no 0 0 0 4 0 1 33.612 33.666 2 0.00020548 7002 20230619_1883_Aki_TMTPro18x_K_F4 144.09 112.72 15898 9100.1 20230 18560 23390 28439 20825 18690 23599 13186 20437 16988 19822 17810 21047 10917 25517 22132 14706 8417.4 20230 18073 23988 27757 21231 19628 23716 13771 21072 17111 20320 17994 21566 11743 24348 20915 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6985400 591 4197 567 1068 882 882 1 9606 Homo sapiens -0.07376481242476984 AEADAYIR Unmodified 907.43995 0.43994572 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 2.5 0.5 1 1 40.024 40.087 2 0.00098964 9641 20230619_1882_Aki_TMTPro18x_K_F3 133.12 80.433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 592 630 568 1069;1070 883;884 884 2 9606 Homo sapiens -0.017476650333492216 AEAEAQAEELSFPR Unmodified 1546.7264 0.72635092 332 A0A024R5C5;P11498 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 1.5 0.5 2 2 51.533 51.556 2;3 3.9756E-22 14960 20230619_1880_Aki_TMTPro18x_K_F1 187.6 166.45 106070 83546 95836 97126 89409 102000 102170 96321 121740 125240 124020 121820 141910 112550 127930 139160 131860 143940 97983 76619 98116 97063 93798 102670 102890 99587 123060 124930 127910 123530 143540 117870 130610 139650 126210 136620 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 343450000 593 332 569 1071;1072;1073;1074 885;886;887 886 3 9606 Homo sapiens -0.025143201123455583 AEAEGESLESWLNK Acetyl (Protein N-term) 1603.7366 0.73658126 2092 J3QRS8;B7Z9A2;B7Z7R9;B7Z1E9;A8K6M0;A8K6I6;Q9NZ52-2;Q9NZ52 GGA3 ADP-ribosylation factor-binding protein GGA3 yes no 1 0 0 2 0 1 64.459 64.467 2 0.012965 20609 20230619_1881_Aki_TMTPro18x_K_F2 50.284 35.133 4997.3 3341.4 5775.1 4492.1 5931.6 4413.3 4436.7 5881.8 3624.5 5165.1 6317.6 5854.5 6397.4 5559 6117.7 8275.2 6453.1 8565.9 4621.5 3071 5791.9 4445.6 6087.4 4507.4 4546.4 5883.5 3853.2 5272.8 6356.6 5912.6 6513.2 5887.4 6257.4 8280.3 6185.6 8125.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8228000 594 2092 570 1075 888 888 1 9606 Homo sapiens -0.041137571777426274 AEAEGVPTTPGPASGSTFR Acetyl (Protein N-term) 1872.8854 0.88537076 3156 K7ENZ6;K7EMF4;K7ELM8;K7EJ34;K7ENF4;Q86VR2 FAM134C Protein FAM134C yes no 1 0 0 2 0 1 50.263 50.315 2 9.4404E-08 14618 20230619_1881_Aki_TMTPro18x_K_F2 64.104 52.939 8357.9 4075.6 9269.6 9305.5 8582.1 9856 9950 10087 11242 12184 10731 11660 11612 11263 10238 16694 13318 12896 7715.8 3780.7 9331.3 8966.9 9006.3 9919.3 9995.7 10344 11369 12184 11079 11854 11772 11906 10641 16456 12710 12291 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18986000 595 3156 571 1076 889 889 1 9606 Homo sapiens -0.016156512748693785 AEAEQSVTCAHCR Unmodified 1517.6351 0.63510985 3247 O43149-3;O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes no 0 0 0 3 0 1 30.025 30.119 3 7.967E-08 5654 20230619_1882_Aki_TMTPro18x_K_F3 143.42 136.39 2412.1 3022 4786.2 3772.4 3496.5 5117.4 3292 4486.1 5097.6 4666.9 4092.4 4978.7 4001.4 3466.8 3512.4 3542.3 7062.8 4692.4 2256 2769.3 4639.7 3767.5 3735.7 5054.4 3393.4 4626.8 5052.1 4716.2 4246.9 4981.7 4069.2 3631.4 3774.8 3623.1 6706.9 4453.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4025800 596 3247 572 1077 890 890 1 9606 Homo sapiens -0.10300230352936524 AEAERPEEQAEASGLKK Unmodified 1841.9119 0.91191986 3790;4031 Q5CZB5;Q02952-3;Q02952-2;Q02952 DKFZp686M0430;AKAP12 A-kinase anchor protein 12 no no 0 0 2 4 0 1 39.852 39.894 4 3.1635E-10 9502 20230619_1883_Aki_TMTPro18x_K_F4 144.72 118.85 128000 110540 129580 121660 117310 121690 120910 111210 126250 155800 182220 188850 166330 142820 174170 155390 161860 154710 118410 101290 131240 122020 122840 122890 121970 115600 130630 156000 183700 188560 170580 149460 176180 156010 154930 146980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77952000 597 4031;3790 573 1078 891 891 1 9606 Homo sapiens 0.024640376164825284 AEAESLYQSK Unmodified 1124.535 0.53496832 2778 H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2;H6VRF9 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 4 0 1 45.86 45.904 3 0.00033586 12134 20230619_1883_Aki_TMTPro18x_K_F4 111.06 72.49 + 38737 46749 40486 44268 459650 58836 148530 46997 102290 43810 49127 49191 50713 201560 55051 50670 59066 61628 35938 42739 46725 45119 432220 59425 165880 49041 105040 44997 53065 54843 53023 194200 56099 54105 56493 58409 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77112000 598 2778 574 1079 892 892 1 9606 Homo sapiens -0.022317763528008072 AEAGAGSATEFQFR Unmodified 1440.6634 0.66335673 3594 P46783;Q59GE4;Q9NQ39 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 0 0 0 3.5 0.5 2 2 47.402 47.463 2;3 1.2702999999999999E-36 13022 20230619_1882_Aki_TMTPro18x_K_F3 279.53 234.36 154700 122060 126930 155040 137460 166650 156490 161030 199590 163660 202810 195820 214780 176260 159290 233430 221040 249100 142800 112030 131600 153980 142720 167460 158020 164990 200840 166320 208320 196860 216200 185520 166780 234280 211090 236320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1674899999.9999998 599 3594 575 1080;1081;1082;1083 893;894 893 2 9606 Homo sapiens -0.03934841109730769 AEAGDNLGALVR Unmodified 1184.6149 0.61494998 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 4 0.816 1 1 1 48.018 48.083 2 2.7617E-09 13287 20230619_1882_Aki_TMTPro18x_K_F3 178.54 135.54 1529600 1132100 1172500 1531200 1592700 1677900 1701500 1767700 2029400 1917500 2232300 2251300 2195100 1866100 1873500 2204600 2154800 2455300 1410800 1040100 1229300 1514900 1624700 1687500 1719100 1803500 2056300 1940000 2278900 2257600 2226300 1955700 1928300 2223000 2061100 2328300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3184799999.9999995 600 1417 576 1084;1085;1086 895;896 895 2 9606 Homo sapiens 0.030027100410279672 AEAGEQPGTAER Unmodified 1214.5527 0.55274365 3663 Q6PJJ2;P56182;Q53FR7;Q96J73 RRP1 Ribosomal RNA processing protein 1 homolog A yes no 0 0 0 1 0 1 29.425 29.425 2 0.0006589 5760 20230619_1880_Aki_TMTPro18x_K_F1 99.752 67.909 11387 6251.5 15718 14194 27092 29411 19266 22024 19707 11101 20792 24776 17159 18021 22805 7068.8 24615 22430 10541 5794.6 15769 13861 27013 28394 19900 22703 20059 12233 21163 24277 17920 18230 23099 8193.8 23519 21150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13452000 601 3663 577 1087 897 897 1 9606 Homo sapiens -0.04595061097961661 AEAGPEGVAPAPEGEK Unmodified 1507.7155 0.71545188 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;B7Z602 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 1.5 0.5 1 1 42.881 42.922 3 1.3025E-05 11228 20230619_1881_Aki_TMTPro18x_K_F2 97.45 78.126 100690 64405 83942 93725 122270 157630 119030 99610 180270 79331 95087 125320 104790 91010 98503 92199 131020 144220 92847 59259 87341 92973 124220 153100 121920 105290 176450 82929 102190 123870 106450 95114 102030 95554 125140 136380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 553600000 602 874 578 1088;1089 898 898 1 9606 Homo sapiens -0.01809722486609644 AEAGPEGVAPAPEGEKK Unmodified 1635.8104 0.8104149 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;B7Z602 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 1 3.5 0.5 1 1 41.159 41.21 3 4.8603E-06 10057 20230619_1883_Aki_TMTPro18x_K_F4 97.579 84.953 67519 64760 66794 78496 103710 85324 93696 81365 92114 81493 104830 86911 90383 75678 98984 92411 85490 74433 62494 59372 68512 78224 104280 85759 94963 83444 94386 82537 106230 87702 93073 79288 99721 91630 81850 70928 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145400000 603 874 579 1090;1091 899 899 1 9606 Homo sapiens 0.017942109845535015 AEAGVPAEFSIWTR Unmodified 1532.7623 0.7623425 3484 P21333;P21333-2;Q60FE5;Q60FE6;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91;H0Y5C6 FLNA;FLJ00119 Filamin-A yes no 0 0 0 7 0 1 61.559 61.598 2 6.5713E-16 18477 20230619_1887_Aki_TMTPro18x_K_F7 203.51 151.59 191680 185370 209470 223130 257430 288440 269310 264510 279880 308420 284930 325330 312720 279070 297810 309280 287040 336930 177580 169930 212160 223090 263850 286160 271150 273000 285010 309800 293650 327710 317620 290980 302580 311850 275090 319540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 374700000 604 3484 580 1092 900 900 1 9606 Homo sapiens 0.017271818551535034 AEALASAIASTK Unmodified 1131.6136 0.61355299 4608 Q9NVT9;Q9NVT9-2 ARMC1 Armadillo repeat-containing protein 1 yes no 0 0 0 1 0 1 57.848 57.848 2 2.8715E-07 17618 20230619_1880_Aki_TMTPro18x_K_F1 154.66 120.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 605 4608 581 1093 901 901 1 9606 Homo sapiens 0.05301075952274914 AEASSANLGSGCEEK Acetyl (Protein N-term) 1550.6519 0.65186535 800 V9GYI0;A0A087WT04;U3KQ54;Q6P1K2-3;Q6P1K2-6;Q6P1K2;Q6P1K2-2;Q6P1K2-5 PMF1;PMF1-BGLAP Polyamine-modulated factor 1 yes no 1 0 0 1 0 1 43.276 43.276 2 6.9087E-20 11536 20230619_1880_Aki_TMTPro18x_K_F1 113.63 103.11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 606 800 582 1094 902 902 1 9606 Homo sapiens -0.10143450985992786 AECGASGSGSSGDSLDK Acetyl (Protein N-term) 1625.6475 0.64750825 2917 E9PHT6;Q9NVE7;Q7RTX2;B4DZX1;D6RJF3 PANK4 Pantothenate kinase 4 yes no 1 0 0 1 0 1 42 42 2 4.5002E-06 10991 20230619_1880_Aki_TMTPro18x_K_F1 76.073 64.583 5497.4 3100 7201.9 5575.9 5451.2 7950.3 7113.9 5950.1 5102.1 7493.1 9935.4 9374.5 7509.8 8453.5 5895.8 6250 9662.9 9922 5086.5 2862.1 7141 5456.6 5849.5 7804.1 7020.1 6260.9 5505.7 7544.2 9853.9 9396.1 7679.5 8629.2 6233.4 6521.9 9210.8 9384.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11701000 607 2917 583 1095 903 903 1 9606 Homo sapiens -0.1402896019956188 AECRPAASENYMR Unmodified 1553.6715 0.67149535 777 A0A024RDU9;P13984 GTF2F2 General transcription factor IIF subunit 2 yes no 0 0 1 4.5 0.5 1 1 33.31 33.379 3 4.3533E-05 6893 20230619_1883_Aki_TMTPro18x_K_F4 115.83 104.72 41743 27842 39204 44966 53463 52147 54462 59900 55202 48931 55015 54628 67326 52376 46491 54222 73636 61541 38534 25645 40284 44079 54369 52350 54881 60338 56186 50208 56972 55142 67325 54233 49172 54849 70108 58418 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36088000 608 777 584 1096;1097 904;905 904 2 9606 Homo sapiens -0.08319353456272438 AEDAVEAIR Unmodified 972.48762 0.4876242 2142;4410 A8K9U0;Q9BWF3;E9PB51;Q9BWF3-4;D6R9K7;J3QRR5;Q9BWF3-3;Q9BWF3-2;Q9BQ04;E9PLB0;E9PM61;U3KQD5 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B no no 0 0 0 2 0 1 42.836 42.917 2 0.00010125 11160 20230619_1881_Aki_TMTPro18x_K_F2 157.91 41.368 293360 239920 268780 272900 349220 365360 297620 311020 404840 343520 380890 367980 409220 309300 304980 415410 414400 352660 271080 219950 276260 274150 355100 361300 306420 322260 405320 346360 392900 370660 411640 326650 318580 411920 395010 335850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 368020000 609 2142;4410 585 1098 906 906 1 9606 Homo sapiens 0.0002798916685833319 AEDDAYTTFISETGK Unmodified 1646.7312 0.73116153 441 A0A024R7E0;Q96RE7;K7ELC5 BTBD14B;NACC1 Nucleus accumbens-associated protein 1 yes no 0 0 0 3 0 1 59.517 59.546 3 2.7271E-05 18220 20230619_1882_Aki_TMTPro18x_K_F3 89.466 71.102 23124 21978 25627 23393 24349 26795 28352 21429 30252 34363 29572 31467 36612 26460 33955 33969 33490 37746 21423 20126 25794 23566 25489 26730 28403 22626 30723 33949 30700 31886 36983 27891 34549 34224 32077 35796 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6994200 610 441 586 1099 907 907 1 9606 Homo sapiens -0.06633480760251587 AEDGATPSPSNETPK Unmodified 1499.674 0.673981 3524 P29966;Q6NVI1 MARCKS Myristoylated alanine-rich C-kinase substrate yes no 0 0 0 3 0.816 1 1 1 38.308 38.361 3 1.2098E-14 9019 20230619_1881_Aki_TMTPro18x_K_F2 190.24 164.59 175960 85510 147710 194180 164740 222100 187100 205300 247720 190670 309450 365590 317860 313450 333510 157950 364730 382300 162080 79317 153000 187250 170860 221740 189280 210570 250970 198920 315400 361010 325140 316870 339570 174400 348790 360670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1123100000 611 3524 587 1100;1101;1102 908;909;910 908 3 9606 Homo sapiens -0.05586903245966823 AEDGATPSPSNETPKK Unmodified 1627.7689 0.76894402 3524 P29966;Q6NVI1 MARCKS Myristoylated alanine-rich C-kinase substrate yes no 0 0 1 3.67 0.471 1 2 37.819 37.865 3;4 1.7766E-14 8752 20230619_1882_Aki_TMTPro18x_K_F3 148.03 131.72 195690 94838 170910 222860 196070 261970 209690 237480 239790 219370 371390 394000 319950 329710 392590 134180 383750 325500 180300 88027 176440 214710 202490 260980 211730 243840 247430 228000 372900 389440 331890 331780 395950 149640 366850 307350 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 980980000 612 3524 588 1103;1104;1105 911;912;913 912 3 9606 Homo sapiens -0.019829697747809405 AEDGENYDIK Unmodified 1152.4935 0.49349744 2886 E5RIW3;Q6FGD7;E5RJD8;O75347;E5RHG6;E5RIX8;O75347-2;A0A494C144 TBCA Tubulin-specific chaperone A yes no 0 0 0 1 0 1 44.027 44.027 2 1.7544E-06 11875 20230619_1880_Aki_TMTPro18x_K_F1 169.93 126.23 82230 45928 71120 84138 75982 104190 76221 74395 109720 105230 127380 143680 134840 120910 107520 98127 154360 162920 75800 42416 73339 81982 78802 103040 77888 78920 110560 105920 130250 143200 136160 124320 112340 102640 147290 154020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75740000 613 2886 589 1106 914 914 1 9606 Homo sapiens -0.07664957112137927 AEDGENYDIKK Unmodified 1280.5885 0.58846046 2886 E5RIW3;Q6FGD7;E5RJD8;O75347;E5RHG6;E5RIX8;O75347-2;A0A494C144 TBCA Tubulin-specific chaperone A yes no 0 0 1 3.5 0.5 1 1 42.437 42.492 3 0.0011502 10654 20230619_1883_Aki_TMTPro18x_K_F4 90.926 63.516 57583 36712 61888 67117 56918 69054 59893 62399 78890 80649 91544 104440 92376 78229 78759 67053 103110 102950 53205 33881 62468 65251 59664 69469 60843 64714 79800 81243 93431 103930 93614 81013 81598 69617 98420 97403 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207030000 614 2886 590 1107;1108 915 915 1 9606 Homo sapiens -0.04061023640952044 AEDGSVIDYELIDQDAR Unmodified 1907.8749 0.87486565 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;H0YMU9;H0YL33;H0YM50;B3KRQ1;H0YN28;H0YNP5;H0YNA0 ANXA2;HEL-S-270 Annexin A2;Annexin yes no 0 0 0 2.5 1.12 1 1 1 1 58.47 58.481 3 1.4261999999999998E-38 17795 20230619_1880_Aki_TMTPro18x_K_F1 259.08 251.56 133990 98735 120920 153920 126680 156410 142350 143350 162350 191110 188150 184740 206300 176860 183430 195700 197460 221060 123720 90864 124240 150810 131730 157570 143270 148650 165450 190370 192590 187550 208880 183750 187770 197740 188950 209610 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7686499999.999999 615 368 591 1109;1110;1111;1112 916;917;918 917 3 9606 Homo sapiens -0.04275678719955067 AEDLNIAPR Unmodified 997.51926 0.51925868 2440 B3KXN9;Q96SZ5 ADO 2-aminoethanethiol dioxygenase yes no 0 0 0 3 0 1 43.564 43.634 2 0.0025813 11189 20230619_1882_Aki_TMTPro18x_K_F3 105.1 46.524 112320 95919 116200 105420 104490 118120 126970 118630 131890 131850 148380 137860 150010 131020 135890 150540 171720 153670 103920 87893 117490 105930 110050 118520 126900 121520 134720 132730 151460 139520 152430 136400 140480 151110 163830 145990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69062000 616 2440 592 1113 919 919 1 9606 Homo sapiens 0.020399819208023473 AEDMETK Acetyl (Protein N-term) 864.3535 0.35349848 3453 P14854;A0A494C160 COX6B1 Cytochrome c oxidase subunit 6B1 yes no 1 0 0 1 0 1 41.884 41.884 2 0.014333 10939 20230619_1880_Aki_TMTPro18x_K_F1 70.268 65.413 93007 74714 108470 136840 178360 170180 132070 165040 156150 113510 154030 175020 160960 143860 161700 97703 172700 184240 86109 68886 110090 133370 178270 169380 136660 167510 157520 119380 158610 173700 164130 147050 164650 103990 165210 174030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65500000 617 3453 593 1114 920;921 920 2 9606 Homo sapiens -0.08410412650209764 AEDNADTLALVFEAPNQEK Unmodified 2073.9855 0.98547873 3437 Q6FHF5;P12004;Q6FI35 PCNA Proliferating cell nuclear antigen yes no 0 0 0 3 1.22 1 2 2 2 1 62.496 62.513 3;4 2.0467E-19 19500 20230619_1880_Aki_TMTPro18x_K_F1 172.66 156.72 375110 304040 360110 350740 263010 307220 336650 308730 298620 350000 322590 280790 388460 294020 346530 424450 357290 343090 346720 278780 365530 349970 282860 314080 334200 316580 307670 349320 332530 289010 392130 309870 354140 419650 341650 326780 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3779999999.9999995 618 3437 594 1115;1116;1117;1118;1119;1120;1121;1122 922;923;924;925 922 4 9606 Homo sapiens -0.008554587317121332 AEDYDVVK Unmodified 937.43928 0.43927702 1340 A0A2P9DU05;A0A8V8TL82;O75116;D6REE7;C9JFJ0 ROCK2 Rho-associated protein kinase 2 yes no 0 0 0 2 0 1 45.595 45.677 2 0.074428 12429 20230619_1881_Aki_TMTPro18x_K_F2 60.682 26.604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 619 1340 595 1123 926 926 1 9606 Homo sapiens -0.03194504473037796 AEDYEENLQVMR Unmodified 1495.6613 0.66130782 1675 H7BYN4;A0A7I2V5Y5;Q02241-2;Q02241;A0A2U3TZL8;Q02241-3 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 0 0 0 1 0 1 49.906 49.906 2 0.0038466 14308 20230619_1880_Aki_TMTPro18x_K_F1 87.298 58.555 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 620 1675 596 1124 927 927 1 9606 Homo sapiens -0.06669637909863013 AEEDEILNR Unmodified 1087.5146 0.51456723 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;P27824-3;D6RGY2;A0A7P0Z484 CANX Calnexin yes no 0 0 0 1 0 1 42.162 42.162 2 1.1112E-08 11022 20230619_1880_Aki_TMTPro18x_K_F1 214.25 190.69 149300 134000 154910 178930 206420 244410 209080 194650 243030 194850 285710 348400 203350 234070 323810 267720 376070 415920 138180 123000 157870 177750 210550 240950 211660 202400 247000 201640 288170 342700 216390 246830 329740 276910 359590 393320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143930000 621 1700 597 1125 928 928 1 9606 Homo sapiens -0.025689470126053493 AEEDTQFNYHR Unmodified 1408.6008 0.60075648 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;Q6MZR8;A8K7A6;Q68EN4;Q5H934 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 2 0 1 35.913 35.97 3 9.088000000000001E-31 8061 20230619_1881_Aki_TMTPro18x_K_F2 267.85 255.09 52385 42461 49127 52280 51769 60474 57540 61892 68180 72530 82069 77813 79468 67556 65316 84931 97600 79329 48411 38958 50242 52104 53765 60553 58034 63391 69415 72877 83384 78443 80545 70930 68548 84700 92944 75474 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218170000 622 1432 598 1126 929 929 1 9606 Homo sapiens -0.08719987177892108 AEEDVEPECIMEK Oxidation (M) 1593.6538 0.65383918 2457;2620 Q59FH4;H0Y5J4;B4DDU5;Q9UJU6-5;Q9UJU6;B4DKZ4;B4DNX5;B4DXL9;Q9UJU6-2;Q9UJU6-3;B4DDD6;Q9UJU6-4;B4DUF9 DBNL Drebrin-like protein no no 0 1 0 1 0 1 46.595 46.595 3 1.3643E-05 12935 20230619_1880_Aki_TMTPro18x_K_F1 118.88 99.304 69891 54778 61738 72896 77675 90097 79769 75150 98585 65664 61045 64179 67590 54190 59767 67329 64520 66658 64547 50305 63712 72314 79558 89429 80835 77566 97797 66904 64706 64881 68403 56941 61217 67391 61701 63311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82466000 623 2457;2620 599 1127 930 930 1514 1 9606 Homo sapiens -0.11924158292458742 AEEDVEPECIMEK Unmodified 1577.6589 0.65892456 2457;2620 Q59FH4;H0Y5J4;B4DDU5;Q9UJU6-5;Q9UJU6;B4DKZ4;B4DNX5;B4DXL9;Q9UJU6-2;Q9UJU6-3;B4DDD6;Q9UJU6-4;B4DUF9 DBNL Drebrin-like protein no no 0 0 0 1 0 1 52.762 52.762 3 0.0014476 15508 20230619_1880_Aki_TMTPro18x_K_F1 79.466 67.49 62989 55393 57787 56945 55108 71799 72808 68925 83804 71713 70239 67698 81901 63376 66939 86343 79290 83844 58232 50724 59114 57615 58033 71404 72701 70677 84185 72235 73188 68809 82483 66766 69122 86194 75777 79645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292060000 624 2457;2620 599 1128 931 931 1 9606 Homo sapiens -0.10679854429849911 AEEELGELEAK Unmodified 1216.5823 0.58231244 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 1 0 1 53.447 53.447 3 3.899E-09 15760 20230619_1880_Aki_TMTPro18x_K_F1 150.04 119.43 45104 27142 38180 49014 35841 60139 40072 46925 83279 59450 64865 105960 87336 85453 40364 120540 127060 159550 41585 25052 39412 47781 37803 59573 41488 49196 81594 60897 68592 104720 86393 90656 47109 122460 120960 151010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53360000 625 4191 600 1129 932 932 1 9606 Homo sapiens -0.01731541872482012 AEEELLK Unmodified 830.43855 0.43854874 4774 yes no 0 0 0 1.67 0.471 1 2 46.571 46.624 2 0.007829 12886 20230619_1881_Aki_TMTPro18x_K_F2 128.57 0 + 260700 198320 229880 258580 269700 316890 327730 297740 426130 400340 387330 363040 443980 317380 309090 412620 447210 395730 240720 182110 236940 256890 278910 315500 329890 308210 427030 398090 401340 368740 444650 334240 324840 411860 426200 376230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 205540000 626 4774 601 1130;1131;1132 933 933 1 9606 Homo sapiens 0.016547008779070893 AEEGIAAGGVMDVNTALQEVLK Acetyl (Protein N-term) 2256.1308 0.13076276 3501 P25398 RPS12 40S ribosomal protein S12 yes yes 1 0 0 5 0.816 1 1 1 67.548 67.581 3 3.3294E-24 21188 20230619_1885_Aki_TMTPro18x_K_F5 111.66 95.521 36881 31102 37139 34511 28118 38439 37748 34475 37303 35163 43703 40662 42478 33710 43314 48944 45618 43499 34112 28503 37563 34642 30226 38471 37504 35529 38256 35671 44474 40840 43415 35805 44189 48617 43610 41381 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 106650000 627 3501 602 1133;1134;1135 934;935;936 935 3 9606 Homo sapiens 0.05294261073004236 AEEGIAAGGVMDVNTALQEVLK Acetyl (Protein N-term);Oxidation (M) 2272.1257 0.12567738 3501 P25398 RPS12 40S ribosomal protein S12 yes yes 1 1 0 5 0 1 66.532 66.575 3 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5804800 628 3501 602 1136 0 9606 Homo sapiens 0.04049957210372668 AEEHNIVFMPVIGK Unmodified 1582.8177 0.81774888 142 Q8N523;A0A024R1I7;Q9UBB9;B4DSX8;B4DPE5;Q9UBB9-2 TFIP11 Tuftelin-interacting protein 11 yes no 0 0 0 8 0 1 56.888 56.945 3 0.00087404 16571 20230619_1888_Aki_TMTPro18x_K_F8 83.087 73.134 41019 32087 38385 39666 30880 39662 39562 36569 44711 38883 40525 40925 53084 40815 47600 49030 51816 53899 37899 29445 39113 39439 32956 40025 39550 37656 45082 39257 42335 41470 53495 42571 48738 49406 49551 51134 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19557000 629 142 603 1137 937 937 1 9606 Homo sapiens 0.0496527205127677 AEEILEK Unmodified 830.43855 0.43854874 3733 Q5VVC8;Q08ES8;Q5VVD0;P62913-2;P62913 RPL11 60S ribosomal protein L11 yes no 0 0 0 2.8 0.748 2 2 1 48.84 48.911 2;3 0.019704 13636 20230619_1882_Aki_TMTPro18x_K_F3 110.81 29.511 1452300 962560 1306500 1398400 2271600 1616100 1537500 1548300 2168000 1644500 1870600 1848100 1946000 1715100 1576400 1674200 2178800 1845900 1340200 885480 1353000 1378800 2258000 1618200 1611800 1589000 2160500 1664400 1935800 1862300 1967300 1771300 1643100 1692700 2076500 1752600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5248100000 630 3733 604 1138;1139;1140;1141;1142 938;939;940 939 3 9606 Homo sapiens 0.01654700877918458 AEELEKPK Unmodified 942.50221 0.50221163 4659 Q9UEE9;B2R9W9;A0A0H5AUJ9;A0A0H5APX3;Q9UEE9-2 CFDP1 Craniofacial development protein 1 yes no 0 0 1 4 0 1 40.983 41.025 3 0.07095 10003 20230619_1883_Aki_TMTPro18x_K_F4 51.864 26.478 142910 102160 149900 155380 227210 200950 171020 196560 202570 120900 175270 171620 143420 127260 183460 100200 146100 130330 132090 93999 152810 153090 228000 199680 176730 199010 203200 127870 179770 170420 149280 131280 183320 103120 140040 123530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105860000 631 4659 605 1143 941 941 1 9606 Homo sapiens 0.02866061315000934 AEELENELHHLEK Unmodified 1589.7686 0.76855009 2857 Q3V6T2;D6W5D1;Q3V6T2-2;A0A2U3TZV9;A0A2R8Y7B1;Q3V6T2-3;Q3V6T2-4;Q3V6T2-5;A0A2R8YG73;A0A2R8Y4X4;A0A2R8Y4W8;A0A2R8YGU1;O14997;Q9UI01;Q6DCA5;A0A2R8YG52 CCDC88A;KIAA1212 Girdin yes no 0 0 0 3 0 1 52.918 52.977 4 0.0007412 15498 20230619_1882_Aki_TMTPro18x_K_F3 92.039 70.166 39007 35297 33534 36629 36673 42898 36761 40681 45698 42199 44619 43784 46865 39483 40920 50634 46922 56099 36050 32321 34586 36980 37895 42862 37351 41739 46004 42623 45917 44253 47479 41472 42103 50974 44900 53192 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148470000 632 2857 606 1144 942 942 1 9606 Homo sapiens -0.0027434470396201505 AEELHYPLGER Unmodified 1312.6412 0.64116473 3884 Q14257;Q14257-2;H0YL43;A8MXP8 RCN2 Reticulocalbin-2 yes no 0 0 0 2.5 0.5 1 1 42.617 42.69 3 2.7854E-06 10775 20230619_1882_Aki_TMTPro18x_K_F3 128.88 103.41 42383 48721 40858 46968 52691 66737 55754 51296 69924 56818 60253 69235 71745 58012 58540 71257 78114 90214 39277 44554 41866 47845 53967 65636 56442 53626 70022 57548 62828 69330 72238 60952 60911 72405 74634 85440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180180000 633 3884 607 1145;1146 943 943 1 9606 Homo sapiens -0.0026502078749217617 AEELLAEEK Unmodified 1030.5183 0.51825563 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;O00429-7;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402 DNM1L Dynamin-1-like protein no no 0 0 0 1.33 0.471 2 1 51.747 51.762 2;3 0.00061895 15196 20230619_1881_Aki_TMTPro18x_K_F2 129.38 79.965 125740 109680 136060 163320 161580 205290 170500 178120 235410 165280 168730 174620 184390 150860 153420 198750 190220 204260 116390 100820 137950 160950 166350 203630 173330 183470 233300 168180 176940 176110 186250 158970 158840 199110 181740 193890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 287820000 634 3212;3213 608 1147;1148;1149 944;945 945 2 9606 Homo sapiens 0.004217227612343777 AEELVNTAPLTGVPQHVPVR Unmodified 2126.1484 0.14840216 3959 Q24JP5-4;Q24JP5;Q24JP5-2 TMEM132A Transmembrane protein 132A yes no 0 0 0 7 0 1 52.652 52.722 3 1.2308E-09 14793 20230619_1887_Aki_TMTPro18x_K_F7 123.55 111.28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 635 3959 609 1150 946 946 1 9606 Homo sapiens 0.13037389180726677 AEEMLSK Unmodified 806.3844 0.38440468 1416 A0A384ME16;Q6ICN0;B0LPF3;P62993;B3KR50;J3KT38;J3QRL5 GRB2 Growth factor receptor-bound protein 2 yes no 0 0 0 4 0 1 46.119 46.163 2 0.022869 12216 20230619_1883_Aki_TMTPro18x_K_F4 101.33 40.567 107050 64539 123090 119980 121090 163930 114310 139830 150300 149120 215730 279830 231830 216570 162950 135160 278680 276250 98946 59593 123680 117090 126020 161690 116930 144730 153610 154170 219280 275600 233020 221210 173110 145150 265500 260900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48433000 636 1416 610 1151 947 947 1 9606 Homo sapiens -0.026532145453188605 AEENTDQASPQEDYAGFER Unmodified 2155.893 0.89303491 4594 Q9NU22;Q6AI22;Q6PJJ1 MDN1;DKFZp686H16106 Midasin yes no 0 0 0 1 0 1 45.395 45.395 3 1.5956E-49 12444 20230619_1880_Aki_TMTPro18x_K_F1 224.86 220.21 15404 14617 16359 17889 18598 18964 16543 15634 17031 18927 22182 25794 27243 19222 18974 27268 25591 21317 14265 13403 16577 17808 19068 19026 16824 16302 17543 19156 22754 25652 27227 20470 19849 26917 24392 20326 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32985000 637 4594 611 1152 948 948 1 9606 Homo sapiens -0.1386758853586798 AEEPGGHAYETPR Unmodified 1412.6321 0.6320566 1267 A0A1B0GUN5;Q5VTI5;Q9Y2H5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 yes no 0 0 0 1 0 1 31.496 31.496 3 3.038E-09 6582 20230619_1880_Aki_TMTPro18x_K_F1 156.81 135.95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 638 1267 612 1153 949 949 1 9606 Homo sapiens -0.057754141438408624 AEERAEVSELK Unmodified 1259.6357 0.635745 3746 P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72;K7EPB9 TPM4;HEL-S-108 Tropomyosin alpha-4 chain yes no 0 0 1 2 0 1 40.457 40.53 3 0.0021147 10057 20230619_1881_Aki_TMTPro18x_K_F2 85.402 44.813 123730 129230 113400 107160 195060 136460 154330 164900 162220 131610 150310 111510 131540 105190 133840 158380 161230 110890 114530 118080 117150 110610 194430 136740 158200 165490 164290 134190 153710 114170 134960 111500 137680 155580 153650 106010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238910000 639 3746 613 1154 950 950 1 9606 Homo sapiens 0.016312556300363212 AEEVATFFAK Unmodified 1111.555 0.55497548 2724 P11387;B9EG90 TOP1 DNA topoisomerase 1 yes no 0 0 0 6.33 0.471 2 1 61.071 61.122 2;3 5.9707E-07 18259 20230619_1887_Aki_TMTPro18x_K_F7 185.6 144.17 544700 502400 548340 586250 508490 630210 553220 568530 644500 661660 636560 620040 687030 574510 618340 764880 645230 674110 504100 460490 556390 585790 533160 632470 558280 587560 651420 662490 655580 630060 696260 604150 632310 760080 617290 641130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 710290000 640 2724 614 1155;1156;1157 951;952 952 2 9606 Homo sapiens 0.0036601937779323634 AEEVEYYYR Unmodified 1220.535 0.53496832 4492 Q9H0B6;Q9H0B6-2;A8MZ87 KLC2 Kinesin light chain 2 yes no 0 0 0 2 0 1 46.644 46.724 2 0.00020455 12937 20230619_1881_Aki_TMTPro18x_K_F2 144.12 127.18 75312 56346 67126 83025 54063 67607 75133 88056 100480 122290 114080 92963 113850 87683 96210 119030 103290 104290 69539 51815 68781 81430 57878 69963 75365 89409 101570 120800 116220 95585 115290 92333 98664 118220 98767 99210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76700000 641 4492 615 1158 953 953 1 9606 Homo sapiens -0.06647776352815526 AEEVVVVAK Acetyl (Protein N-term) 984.54916 0.54916182 1094 A0A0S2Z4E4;B2R6S4;A0A0S2Z4Y3;P16333;C9K098;C9JVV5;C9J869;A0A0S2Z4D7;C9J0K5 NCK1 Cytoplasmic protein NCK1 no no 1 0 0 1 0 1 55.769 55.769 2 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13026000 642 1094 616 1159 0 9606 Homo sapiens 0.05626920866143337 AEEWHGRPK Unmodified 1108.5414 0.5413911 2305 B2RCD8;Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes no 0 0 1 6 0 1 32.196 32.232 4 0.026183 6622 20230619_1886_Aki_TMTPro18x_K_F6 58.433 35.005 56094 37705 54866 63284 70409 72470 56658 70128 96181 48292 55232 42179 47101 45093 58428 44536 59398 42368 51801 34747 56105 61881 71581 72498 59148 71180 93957 49897 58158 43260 48926 46371 59183 44699 56705 40327 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10041000 643 2305 617 1160 954 954 1 9606 Homo sapiens -0.008537936107813948 AEEYEFLTPVEEAPK Unmodified 1750.8301 0.83014729 3634 V9HWE8;P52565;J3KTF8;J3QQX2;J3KRE2 HEL-S-47e;ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 0 0 0 2.5 1.12 2 2 2 2 60.719 60.73 2;3 6.5328E-25 18700 20230619_1882_Aki_TMTPro18x_K_F3 282.94 276.36 473440 392520 451370 442110 360110 422760 460100 450460 452750 543520 528070 524440 571690 486370 546780 627710 535490 590410 437640 359800 458940 442420 384080 429690 458140 460830 465100 543510 540250 532130 580830 510420 556300 626200 512840 560970 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 4982300000 644 3634 618 1161;1162;1163;1164;1165;1166;1167;1168 955;956;957;958;959 958 5 9606 Homo sapiens -0.015234577953151529 AEFAAPSTDAPDK Unmodified 1318.6041 0.60411052 1760 A0A8I5KRX4;A0A8I5KRG4;A0A8I5KVC8;Q96B26 EXOSC8 Exosome complex component RRP43 yes no 0 0 0 3.5 0.5 1 1 46.834 46.894 3 4.6245E-05 12716 20230619_1882_Aki_TMTPro18x_K_F3 112.82 94.192 157870 123280 134150 159470 161710 203890 170890 175820 240300 187820 202390 208680 224930 190160 180520 240830 233820 235620 145760 113180 138860 158590 166430 202060 173860 181840 239210 189970 210400 210360 226810 199430 187620 240730 223210 223840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288060000 645 1760 619 1169;1170 960 960 1 9606 Homo sapiens -0.0424473712391773 AEFEDQDDEAR Unmodified 1323.5215 0.5215031 3897 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 0 0 0 1 0 1 38.375 38.375 2 3.2612E-31 9352 20230619_1880_Aki_TMTPro18x_K_F1 289.18 249.11 80448 62256 61056 85016 101780 101760 87465 94770 114340 94100 104020 113400 117830 97859 98640 103910 131940 110220 74214 57192 64382 84145 102130 101480 89822 97263 114530 95766 107860 113690 118940 101780 102490 104680 125770 104700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136070000 646 3897 620 1171 961 961 1 9606 Homo sapiens -0.12731678922705214 AEFFADVVPAVR Unmodified 1319.6874 0.68738664 4174 Q7Z508;Q9UHY7;D6RA00 ENOPH1 Enolase-phosphatase E1 yes no 0 0 0 7.5 0.5 1 1 62.112 62.144 2 1.1103E-09 18770 20230619_1887_Aki_TMTPro18x_K_F7 187.97 159.76 227970 163460 194180 209380 158970 187920 195600 196630 211010 264780 249100 244830 322280 247470 242160 355480 320860 325880 210380 150100 199620 207410 169070 191840 195690 202130 215940 263260 256900 249740 322670 261020 252620 353460 306270 309810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 314710000 647 4174 621 1172;1173 962 962 1 9606 Homo sapiens 0.040330441145897566 AEFGDFDIK Unmodified 1040.4815 0.48147619 1028 A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0;Q5JRC6;B4E138;Q8IWS0-4;Q8IWS0-2 PHF6 PHD finger protein 6 yes no 0 0 0 4 0.816 1 1 1 58.755 58.784 2 0.001902 17907 20230619_1882_Aki_TMTPro18x_K_F3 111.46 67.751 323960 290780 332240 321440 322230 375480 357410 341620 376040 422870 407520 419130 451620 367370 393670 459120 440610 480280 299800 266420 336620 322950 336530 374870 359000 353520 383630 422830 418650 423870 456680 385660 404290 460880 421400 455800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 367230000 648 1028 622 1174;1175;1176 963;964 963 2 9606 Homo sapiens -0.03714529064677663 AEFGPPGPGAGSR Unmodified 1198.5731 0.57308516 4514 Q9H4A4;A6NKB8;Q7RU04;A0A087WU27 RNPEP Aminopeptidase B yes no 0 0 0 5 0 1 41.467 41.553 2 4.6747E-06 10155 20230619_1885_Aki_TMTPro18x_K_F5 140.78 113.16 60036 44623 65344 57851 59978 63750 61438 63290 64701 76752 85216 85575 95268 67943 77500 84906 93956 88634 55522 40977 65801 57436 62725 64012 62022 65043 66606 77077 86895 85877 95978 71625 80063 85238 89701 84165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214800000 649 4514 623 1177 965 965 1 9606 Homo sapiens -0.018258456474768536 AEFSAGAWSEPR Unmodified 1306.5942 0.59421454 1753 H7C0H7;A0A8I5KRB3;A0A8I5KQY4;A0A8I5KYK3;A0A8I5KQ30;A0A8I5KU55;H7C192;B3KMZ5;Q8N6S5 ARL6IP6 ADP-ribosylation factor-like protein 6-interacting protein 6 yes no 0 0 0 4.5 0.5 1 1 50.255 50.309 2 3.2963E-09 14132 20230619_1883_Aki_TMTPro18x_K_F4 175.49 155.16 69404 49304 63551 64751 60464 72596 71667 76641 75899 79196 79846 82276 95791 74257 84365 82501 87399 99073 64078 45291 65015 64233 63404 72879 71773 78061 77279 79975 82457 83104 96659 77365 86146 83707 83674 93881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100050000 650 1753 624 1178;1179 966 966 1 9606 Homo sapiens -0.04681880338625888 AEFTSPPSLFK Unmodified 1222.6234 0.6233894 1861 Q6UN15;A0A994J3L0;A0A994J3K5;A0A994J3M0;A0A994J3Q0;A0A994J442;A0A994J3S6;A0A994J6N5;A0A994J3S0;A0A994J453;A0A994J474;A0A994J464;A0A994J6R0;A0A994J458;A0A994J3I9;A0A994J469;A0A994J6C6;A0A994J6D6;A0A994J3L5;A0A994J6B4;A0A994J6P0;A0A994J6Q2;A0A994J3R0;A0A994J3J1;A0A994J6Q5;A0A994J6B8;A0A994J3K1;A0A994J3R5;Q6UN15-4;H0Y8P7;A0A994J6P3;A0A994J6E0;A0A994J6D3;A0A994J3P6;A0A994J3Q5;A0A994J438;A0A994J6E2;Q6UN15-3;Q6UN15-5;A0A994J6P8;A0A994J6C9;A0A994J6C2;B4DTW7;A0A994J3T5;A0A0B4J203;A0A994J3J6;A0A994J448;A0A994J6R4 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes no 0 0 0 1.33 0.471 2 1 59.74 59.745 2;3 3.2383E-05 18360 20230619_1880_Aki_TMTPro18x_K_F1 163.94 122.95 83321 81218 94837 91514 92761 103260 100390 88697 89163 104050 99802 76550 84739 70477 127310 66320 66769 67595 77225 74405 95332 91756 96645 103220 100450 92053 91972 103480 101190 78744 88886 72723 125030 67000 64475 64186 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 96526000 651 1861 625 1180;1181;1182 967;968 967 2 9606 Homo sapiens 0.020982639576459405 AEFVEVTK Unmodified 921.48075 0.48074791 2776 CON__P02769 yes yes 0 0 0 4.8 0.748 2 2 1 50.148 50.208 2;3 0.0016679 14081 20230619_1883_Aki_TMTPro18x_K_F4 149.65 88.865 + 402710 1162700 1399300 515220 4040400 4797400 2030800 1922000 3352800 1205400 1311800 1574800 662360 956740 1022200 1139000 1538700 2431200 385880 1057100 1373600 630000 3936800 4460000 2201600 2138800 3254600 1275100 1415300 1560100 718390 1017100 1062700 1212900 1473400 2292200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3125899999.9999995 652 2776 626 1183;1184;1185;1186;1187 969;970 969 2 9606 Homo sapiens 0.016866762862946416 AEFYFQPWAQEAVCR Unmodified 1900.8567 0.85665359 119 Q96GM5;A0A024R102;A0A024R137;Q96GM5-2;F8VRQ4;A8K9I5;H0YHV1 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 0 0 0 8 0 1 62.766 62.792 3 0.035002 19002 20230619_1888_Aki_TMTPro18x_K_F8 32.917 28.93 57865 50693 63735 61066 58005 68065 65293 68537 61778 71154 70615 70372 83958 65603 72314 77806 81303 85713 53575 46487 64158 60932 60892 68301 65350 70039 63553 71719 72625 71328 84672 68522 74264 78417 77734 81311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33938000 653 119 627 1188 971 971 1 9606 Homo sapiens -0.05774047385011727 AEGAATEEEGTPK Unmodified 1288.5783 0.5782897 3759 P80723;P80723-2;U3KQP0 BASP1 Brain acid soluble protein 1 yes no 0 0 0 1 0 1 37.119 37.119 3 3.8141E-05 8826 20230619_1880_Aki_TMTPro18x_K_F1 100.38 85.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 654 3759 628 1189 972 972 1 9606 Homo sapiens -0.054456313662058164 AEGDVAALNR Unmodified 1014.5094 0.50942227 3746 P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1 TPM4;HEL-S-108 Tropomyosin alpha-4 chain yes no 0 0 0 2.5 0.5 1 1 38.918 38.979 2 2.1313E-09 9296 20230619_1881_Aki_TMTPro18x_K_F2 200.88 160.85 469760 263670 351920 428030 494120 610580 521010 559970 990330 536610 589380 676380 764680 633960 437080 680010 796210 752220 432620 243090 370040 420770 504510 601890 537640 574680 964890 549000 631180 678800 759760 657880 471310 685940 758030 713860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1043099999.9999999 655 3746 629 1190;1191 973;974 973 2 9606 Homo sapiens 0.0027479391541191944 AEGDVAALNRR Unmodified 1170.6105 0.6105333 3746 P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1 TPM4;HEL-S-108 Tropomyosin alpha-4 chain yes no 0 0 1 4.5 0.5 1 1 34.651 34.72 3 2.9096E-06 7448 20230619_1885_Aki_TMTPro18x_K_F5 149.96 113.43 321670 259330 310450 313980 431780 400140 362750 445500 462690 343320 436420 397370 367100 318950 378330 374580 457340 356170 297330 237900 318030 313850 436620 399280 373020 448890 464190 354150 445700 398590 377550 334410 388810 374570 436120 338860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 319220000 656 3746 630 1192;1193 975;976 976 2 9606 Homo sapiens 0.03205245618119079 AEGEREEEGRAEAPDK Unmodified 1771.7973 0.79728403 2915 E9PGC8;P78559;P78559-2 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 2 1 0 1 31.398 31.398 4 8.1199E-05 6574 20230619_1880_Aki_TMTPro18x_K_F1 95.767 67.44 11361 8744.9 13504 14011 20575 22189 17261 17725 28909 18276 20811 22576 22413 16639 19357 18576 24538 22203 10518 8049.2 13649 13812 20736 21706 17944 18424 28437 18597 21808 22513 22671 17476 20017 18843 23411 21058 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58230000 657 2915 631 1194 977 977 1 9606 Homo sapiens -0.05774271865493574 AEGFNLLSK Unmodified 977.5182 0.51819605 4744 Q9Y586;F1T0A2;B2R805;Q13394 MAB21L2;MAB21L1 Protein mab-21-like 2;Protein mab-21-like 1 yes no 0 0 0 4.5 3.5 1 1 56.846 56.874 2;3 0.0007338 17197 20230619_1880_Aki_TMTPro18x_K_F1 143.39 91.658 203130 170280 163830 176540 133900 151690 160460 165930 182380 214000 235570 247660 233210 224730 236070 259420 253030 277470 187550 155960 169290 177570 142320 155700 161060 169870 186770 214650 239210 249110 238400 234290 241080 261090 242100 263270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75214000 658 4744 632 1195;1196 978;979 978 2 9606 Homo sapiens 0.028537675519146433 AEGFVDALHR Unmodified 1113.5567 0.55670682 507 A0A024R8A7;Q96I24;A0A494C1K6;A0A8V8TNQ2 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 0 0 0 4.5 0.5 1 1 45.805 45.865 3 2.4613E-14 12085 20230619_1883_Aki_TMTPro18x_K_F4 205.59 165.96 92903 82053 87796 87883 91524 101700 97439 95591 110770 107230 113810 112560 117290 102660 104970 127320 118470 123820 85908 75161 89668 88500 94958 101690 98331 98388 112220 107930 116760 113730 119040 107510 107830 127290 113260 117620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 408590000 659 507 633 1197;1198 980;981 980 2 9606 Homo sapiens 0.0044707318641030724 AEGGGGGGRPGAPAAGDGK Unmodified 1537.7233 0.72333123 3776 Q00839;B3KX72;Q96BA7 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 1 4 0.816 1 1 1 31.694 31.767 3 4.4714E-07 6194 20230619_1883_Aki_TMTPro18x_K_F4 104.23 87.981 42631 14439 42373 58927 63776 92505 54099 75874 74908 49659 84830 99906 88671 94953 73057 48471 114140 115200 39274 13624 43516 56149 64508 90429 55798 77902 75401 53182 86815 98896 89800 95634 76681 53284 108820 108700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 118600000 660 3776 634 1199;1200;1201 982;983 982 2 9606 Homo sapiens -0.02402150446482665 AEGGGGGGRPGAPAAGDGKTEQK Unmodified 2023.9671 0.96714333 3776 Q00839;B3KX72;Q96BA7 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 2 5 0 1 33.042 33.124 4 0.0089668 6822 20230619_1885_Aki_TMTPro18x_K_F5 61.707 44.426 50591 26363 73412 64590 111880 98419 74228 96792 62534 56295 103570 65956 72740 47720 103120 15550 57430 26970 46848 24478 73159 62480 111860 96886 76788 97808 65934 59312 102780 65975 76461 48198 101300 17099 55179 25607 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60328000 661 3776 635 1202 984 984 1 9606 Homo sapiens -0.003881558630610016 AEGIREPK Unmodified 898.48723 0.48723027 3589 P46087;P46087-4;P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 1 4.5 0.5 1 1 34.567 34.636 3 0.017388 7399 20230619_1885_Aki_TMTPro18x_K_F5 71.692 24.118 73819 39648 95905 95974 140020 140860 111090 126790 112680 85252 127260 134220 121300 101440 120480 59488 145070 124760 68281 36799 96234 92767 140980 138610 113800 129340 115180 89885 129690 132830 123940 103580 123520 64323 138430 117880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95709000 662 3589 636 1203;1204 985 985 1 9606 Homo sapiens 0.03392614237657199 AEGLDCSYTVLFGK Unmodified 1558.7337 0.73374448 2966 F5GZZ0;S4R3T5;F5H5X2;Q6NS38;Q6NS38-2 ALKBH2 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 yes no 0 0 0 8 0 1 62.381 62.406 3 0.069775 18801 20230619_1888_Aki_TMTPro18x_K_F8 49.333 39.646 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 663 2966 637 1205 986 986 1 9606 Homo sapiens -0.02327303836318606 AEGLLQGK Unmodified 814.45487 0.45486751 2011 G3V167;A8K214;Q9UGN5-2;Q9UGN5 PARP2 Poly [ADP-ribose] polymerase 2 yes no 0 0 0 7 0 1 47.674 47.762 2 0.0096905 12582 20230619_1887_Aki_TMTPro18x_K_F7 113.5 42.814 87470 68429 73736 86790 84843 98793 91849 89878 114520 99378 108580 95052 107710 92046 95492 110330 116570 100430 80754 62811 76302 86273 87545 98767 92884 92692 115100 99849 111540 96664 109400 96004 98556 109990 111220 95550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32265000 664 2011 638 1206 987 987 1 9606 Homo sapiens 0.040218268346734476 AEGLQVGQDAR Unmodified 1142.568 0.56799978 4285 Q8WWM7;A0A024QZB7;A0A0C4DGL7;H3BRB0 ATXN2L Ataxin-2-like protein yes no 0 0 0 2.5 0.5 1 1 38.424 38.482 2 2.5854E-12 9098 20230619_1881_Aki_TMTPro18x_K_F2 212.28 180.78 150340 109160 127010 128230 141850 161140 139050 135000 189380 159670 180210 190690 181710 148880 164850 188350 223450 199920 138740 100150 131190 128380 146280 159860 141910 140400 189620 161070 185440 190750 184640 157060 171280 189220 213060 189850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 120150000 665 4285 639 1207;1208 988;989 988 2 9606 Homo sapiens 0.0024185048989693314 AEGNDHIER Unmodified 1039.4683 0.46828574 1037;1668 A0A0G2JN29;Q15155;A0A0G2JP90;Q9H049;A0A7I2V4T6;A0A7I2V6B0;J3KN36;Q5JPE7-2;P69849;Q5JPE7;A0A7I2V3P4;A0A7I2V2Z5;Q5JPE7-3;Q1LZN2;A0A087WTD5 NOMO1;DKFZp547A1913;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 2;Nodal modulator 3 no no 0 0 0 1 0 1 23.216 23.216 3 0.045419 3871 20230619_1880_Aki_TMTPro18x_K_F1 48.998 25.441 3986 3906.6 4302.6 3850.6 4864.9 8657.5 4292 7025.7 5201.8 3441.8 6175.4 6438.3 5608.2 5449.1 8756.3 4047.8 7051.7 7407 3692.7 3574.8 4353.8 3958.1 5020.5 8342.3 4398 7182.3 5276.3 3763.5 6273.8 6368.4 5893.6 5579.4 8728 4293.5 6766 6998.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19406000 666 1037;1668 640 1209 990 990 1 9606 Homo sapiens -0.04986967124045805 AEGNPKPEIIWLR Unmodified 1521.8304 0.83036248 4302 Q92626;C9J4I9;H7C1W1;Q92626-2 PXDN Peroxidasin homolog yes no 0 0 1 1 0 1 54.469 54.469 3 0.033528 16186 20230619_1880_Aki_TMTPro18x_K_F1 54.95 31.715 76265 67901 77537 90031 108560 114670 109190 105340 117590 112410 112480 108950 115160 91580 108520 123650 108010 112780 70569 62326 79213 89390 110270 113870 110270 108430 119140 113120 115750 110210 117090 96753 110520 123090 103390 107210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81236000 667 4302 641 1210 991 991 1 9606 Homo sapiens 0.09032051505823802 AEGPEVDVNLPK Unmodified 1266.6456 0.6455814 3815 Q09666;Q8N274;B4DTV0 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 3 0.816 1 1 1 51.892 51.936 3 7.4802E-10 14836 20230619_1883_Aki_TMTPro18x_K_F4 179.19 137.91 131700 100920 105750 91027 119650 147690 152910 160480 214300 169590 176940 217360 196770 161680 205110 214020 209600 232320 121540 92364 109760 93633 124360 145350 154070 163190 213200 172410 184480 216520 200580 171390 208730 215220 200650 220380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 729050000 668 3815 642 1211;1212;1213 992 992 1 9606 Homo sapiens 0.022924436354287536 AEGPGLSR Unmodified 785.40317 0.40316629 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 0 3 0.816 1 1 1 32.545 32.608 2 0.0022146 6606 20230619_1882_Aki_TMTPro18x_K_F3 130.28 63.247 160830 82388 188630 186570 302900 392560 237120 298710 315220 183710 306900 444160 319690 303090 294680 126420 394240 413110 148580 76393 191090 182260 304340 378690 245400 308330 315850 199930 316750 433520 324970 308050 304600 146510 376380 389270 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 181160000 669 3484 643 1214;1215;1216 993;994;995 994 3 9606 Homo sapiens 0.001880831407675032 AEGPGRGDEPSPS Unmodified 1254.5477 0.54765827 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q5SV16 ATAD3A ATPase family AAA domain-containing protein 3A yes no 0 0 1 1 0 1 31.148 31.148 2 0.00081054 6415 20230619_1880_Aki_TMTPro18x_K_F1 101.12 77.796 25735 14089 34985 38833 55310 64109 40904 56425 53591 32731 49874 60683 55429 51600 55468 27046 60132 59898 23818 13111 35102 37451 55478 62655 42502 57486 53661 35231 51671 59970 56426 52238 56494 29514 57488 56544 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76932000 670 4603 644 1217 996 996 1 9606 Homo sapiens -0.06943364960579856 AEGPSSTPSSAAGPRPPR Unmodified 1720.8493 0.84926002 3168 K7ERU0;K7ENY2;Q9UK33 ZNF580 Zinc finger protein 580 yes no 0 0 1 7 0 1 31.755 31.848 3 2.6681E-09 6063 20230619_1887_Aki_TMTPro18x_K_F7 104.21 85.842 7503.9 5785.8 8840.3 8344.8 6813.7 7840.3 10153 9958.4 9434.1 10421 12035 13588 12784 10332 12174 8776.4 12703 11632 6946.4 5318.5 8837.9 8212.9 7321 8011.4 10026 10042 9755.4 10595 12271 13526 12988 10687 12399 9017.7 12142 11022 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5628600 671 3168 645 1218 997;998 998 2 9606 Homo sapiens 0.01766936338913183 AEGQAHQPNFTFR Unmodified 1501.7062 0.7062246 2031 F8VYK6;F8VZZ7;F8VTT7;F8VP94;B7Z1P5;F8VYK3;F8VZ57;A8K3X2;Q15633-2;Q15633 TARBP2 RISC-loading complex subunit TARBP2 yes no 0 0 0 7 0 1 39.631 39.696 3 5.4631E-06 9114 20230619_1887_Aki_TMTPro18x_K_F7 124.24 106.43 28295 20338 26559 27268 30164 29982 28125 31079 38329 34009 32232 33320 33041 30055 30596 39200 30798 28872 26130 18686 27176 27004 30988 30142 28798 31741 38230 34201 33397 33753 33596 31567 31215 38647 29452 27539 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40353000 672 2031 646 1219 999 999 1 9606 Homo sapiens -0.02456026261666011 AEGSDVANAVLDGADCIMLSGETAK Oxidation (M) 2509.1312 0.13123305 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 1 0 4 0.707 1 2 1 62.162 62.189 3 6.2987E-20 19297 20230619_1882_Aki_TMTPro18x_K_F3 154.87 133.07 73638 54718 71199 70204 79426 67968 77036 75583 79722 73585 81058 83982 89018 73346 77947 94486 75373 88990 68033 50242 72618 69619 81624 69126 77915 76655 81124 74786 83474 84463 90046 77120 79413 94255 72236 84531 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 173740000 673 370;3451 647 1220;1221;1222;1223 1000;1001;1002 1000 220 3 9606 Homo sapiens -0.06296732060127397 AEGSDVANAVLDGADCIMLSGETAK Unmodified 2493.1363 0.13631842 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 4 0 1 64.166 64.175 4 0.078969 20123 20230619_1883_Aki_TMTPro18x_K_F4 39.893 31.503 5109.2 4128 6669.3 5047.1 8541.4 5299.8 7793.3 8641 9080.8 8676.8 6706.2 10236 7382.5 7408 9398.1 8565.3 8143.5 8533.6 4735.9 3787.2 6659 5033.5 8667.2 5427.5 7941.7 8591.7 9091.7 8808.5 7052 10209 7617.2 7788.9 9447.4 8591.2 7806.4 8104.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153410000 674 370;3451 647 1224 1003 1003 1 9606 Homo sapiens -0.050524281974958285 AEGSEIR Unmodified 760.37153 0.37153181 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;A0A7P0Z4J0;B4DJS0;A0A7P0Z4S2;A0A7P0TAX9;A0A7P0Z476;I3NI03;A0A7P0TBP8;A0A7P0T9S9;B4DNP9;I3L3U6 P4HB Protein disulfide-isomerase yes no 0 0 0 1 0 1 29.498 29.498 2 0.011039 5790 20230619_1880_Aki_TMTPro18x_K_F1 117.18 36.883 39349 14410 66946 66675 104500 101190 70938 113950 63923 33517 81767 122420 51181 73648 86050 18676 107560 97319 36471 13647 66251 63398 104450 99877 73400 113260 66069 40823 82060 118400 55087 74573 87685 24288 102630 91639 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43963000 675 537 648 1225 1004 1004 1 9606 Homo sapiens -0.018239096131878796 AEGSSTASSGSQLAEGK Unmodified 1565.7169 0.71690845 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;Q9NZB2-5;Q9NZB2-2;A0A0C4DH52 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 0 0 3 0 1 39.304 39.358 3 2.3868E-06 9323 20230619_1882_Aki_TMTPro18x_K_F3 107.82 96.231 18979 14130 21305 25206 23844 32228 26231 30461 32664 26966 36832 35041 34888 33291 30367 23579 38901 40638 17557 13027 21521 24612 24679 31976 26520 31133 33040 27699 37488 35142 35481 33892 31390 24831 37150 38411 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37673000 676 1839 649 1226 1005 1005 1 9606 Homo sapiens -0.04332133188518128 AEGTFPGKI Unmodified 918.48108 0.48108226 3453 P14854 COX6B1 Cytochrome c oxidase subunit 6B1 yes yes 0 0 1 6.5 0.5 1 1 49.941 50.02 2 0.014437 13558 20230619_1887_Aki_TMTPro18x_K_F7 90.709 19.329 133450 117260 126120 153840 153790 175340 177750 156450 192670 140290 162570 160440 175520 148420 142890 162400 167150 164600 123400 107630 129350 152570 158240 175200 178180 160790 194050 143390 168750 161620 177190 154230 147320 163060 159680 156320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105000000 677 3453 650 1227;1228 1006;1007 1007 2 9606 Homo sapiens 0.01858096006139931 AEGTTYRDELLTK Unmodified 1495.7518 0.75183739 1855 A0A8V8TQW4;O14617-4;O14617;O14617-5;O14617-2;Q6PK82;O14617-3;A0A2R8Y4J3 AP3D1 AP-3 complex subunit delta-1 yes no 0 0 1 4.5 0.5 1 1 45.535 45.596 3 5.8064E-06 11876 20230619_1885_Aki_TMTPro18x_K_F5 128.95 113.96 110600 89628 98765 107660 87502 117770 113820 116690 149820 173890 142800 180230 230010 190290 110340 272720 247910 280040 102180 82212 101230 107380 92741 118260 114360 120790 150560 172880 150760 183070 226430 200370 122800 272590 236090 265790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189300000 678 1855 651 1229;1230 1008 1008 1 9606 Homo sapiens 0.0237915441007317 AEGTVNEGRPESDAADHTGPK Unmodified 2136.9672 0.96720291 4340 Q96EH3 MALSU1 Mitochondrial assembly of ribosomal large subunit protein 1 yes yes 0 0 1 2 0 1 33.548 33.606 4 1.9555E-07 7109 20230619_1881_Aki_TMTPro18x_K_F2 97.256 87.972 31693 20890 32205 35194 30861 35902 33363 36525 36286 34382 40189 46149 45319 43316 33695 42929 54423 50346 29274 19254 32671 34356 32242 36238 33608 37217 36952 35222 41304 46211 45591 44735 35658 43538 51843 47755 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61127000 679 4340 652 1231 1009 1009 1 9606 Homo sapiens -0.05580200653685097 AEGYAEGDLTLYHR Unmodified 1593.7423 0.74233534 2518 B4DKU3;Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 0 0 0 3.5 0.5 1 1 46.086 46.147 3 1.1081E-11 12225 20230619_1883_Aki_TMTPro18x_K_F4 175.21 148.86 97376 84175 101190 107150 96200 113690 111940 108270 113530 115300 130110 129220 137180 117710 123290 140160 139450 137990 90101 77238 102450 106410 100770 114320 112040 111200 116240 116570 133020 130220 139140 122970 126600 140330 133260 131090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157070000 680 2518 653 1232;1233 1010;1011 1011 2 9606 Homo sapiens -0.03078613875436531 AEGYEVAHGGR Unmodified 1144.5261 0.52613497 105 Q9BPW0;H0YDU8;Q53FR0;A0A024R0Q7;P53041;A8MU39;B4DLP6;B4DDZ8;B2R6R6 PPP5C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 5 yes no 0 0 0 2.5 0.5 1 1 30.351 30.431 3 1.2316E-06 5754 20230619_1882_Aki_TMTPro18x_K_F3 160.18 125.49 53122 32815 43768 53119 58176 56391 57920 58704 85956 60294 69466 71457 74384 59568 55294 49590 85186 75108 48973 30238 45505 51984 59294 56819 59249 59858 85236 61242 72241 71584 74863 61365 58169 51447 81146 71105 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143690000 681 105 654 1234;1235 1012;1013 1013 2 9606 Homo sapiens -0.04034705198614574 AEHDQLLLNYAK Unmodified 1413.7252 0.72522871 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 LMNB1 Lamin-B1 yes no 0 0 0 5.5 0.5 1 1 48.923 49 3 4.763E-13 13456 20230619_1886_Aki_TMTPro18x_K_F6 194.39 176.08 412320 215170 324380 383320 311290 400320 300570 308690 423160 462140 446210 620200 681270 591500 362310 779190 741600 919790 379730 198710 336970 373100 325040 401060 307650 325980 425640 463790 467760 621360 673220 621110 397320 786410 707130 871480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1505199999.9999998 682 3482 655 1236;1237 1014;1015 1015 2 9606 Homo sapiens 0.03491510309459045 AEHENLFR Unmodified 1014.4883 0.4882929 1808 Q8TEW0;Q8TEW0-3;A0A8Q3WLH5;Q8TEW0-2;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-5;Q8TEW0-8;Q8TEW0-10;F5GZI3;Q8TEW0-9;Q5VWU8;Q8IX28;Q8IX26;Q8IX27 PARD3 Partitioning defective 3 homolog yes no 0 0 0 3.5 0.5 1 1 34.971 35.026 3 0.00071933 7614 20230619_1882_Aki_TMTPro18x_K_F3 110.12 69.233 23234 13476 23665 26881 27720 34800 28500 28041 38756 33769 43228 47389 37777 35844 39664 32384 44717 55079 21448 12460 24092 26115 28543 34398 29007 29272 39046 34248 43932 47063 38844 37183 40541 33890 42808 52036 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28366000 683 1808 656 1238;1239 1016 1016 1 9606 Homo sapiens -0.018371713934243417 AEHIPSGPLR Unmodified 1075.5774 0.57744226 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DM27 PRRC2C Protein PRRC2C yes no 0 0 0 6.5 0.5 1 1 36.97 37.037 3 0.0013485 8356 20230619_1886_Aki_TMTPro18x_K_F6 90.827 78.613 35656 31971 36789 30406 40278 43197 41698 44575 49762 40041 40358 39439 43805 38322 40780 45520 48519 43934 32999 29256 37291 31047 41594 42761 42214 45290 49845 40709 41997 40048 44476 39943 41972 45528 46316 41763 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36794000 684 2894 657 1240;1241 1017 1017 1 9606 Homo sapiens 0.04267663566088231 AEHMETNAVGPSPSSDTR Oxidation (M) 1900.8221 0.82211857 1541 J3KSW8;U6FSN9;A0A494BZV2;Q6WCQ1-3;Q6WCQ1;Q6WCQ1-2;Q8N236;A0A1W2PPU9 MPRIP;Mprip-Ntrk1 fusion gene Tyrosine-protein kinase receptor;Myosin phosphatase Rho-interacting protein yes no 0 1 0 1.5 0.5 1 1 29.757 29.791 3 0.0063073 5671 20230619_1881_Aki_TMTPro18x_K_F2 62.94 58.549 1179 0 0 1302.5 3041.6 2146.9 2396.1 1625.4 2130.8 2475.8 1469 1686.2 1036.7 1336.7 1371.8 2028.6 1913.8 1862.1 1074.4 0 0 1213.2 2893.3 2095 2438.1 1719.9 2164.5 2432.5 1522 1733.3 1092.2 1425.5 1422.7 2015.9 1825.5 1770.6 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14523000 685 1541 658 1242;1243 1018 1018 1015 1 9606 Homo sapiens -0.09225960054413918 AEHQQDSEDLFKK Unmodified 1573.7372 0.73724996 151 Q9UH99-2;Q9UH99;B4E2A6;A0A024R1P7;A0A8I5QKM0;B4DIU6;Q9UH99-3;B0QY60;A8K129;B0QY64;A0A024R1S6;Q6NT72 SUN2;UNC84B SUN domain-containing protein 2 yes no 0 0 1 3.5 0.5 1 1 41.823 41.876 4 2.5141E-06 10347 20230619_1883_Aki_TMTPro18x_K_F4 138.77 129.58 73727 35008 66305 73555 96769 82209 91291 95378 115430 83021 96190 95224 98936 77045 83014 86301 81671 77244 67937 32433 68452 71172 97812 82761 93076 96174 115360 84973 99689 95514 100070 80567 84637 86080 78125 73479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100450000 686 151 659 1244;1245 1019 1019 1 9606 Homo sapiens -0.026669177380881592 AEHVVVPIVAFNK Unmodified 1421.8031 0.8030851 1915 B4DHJ4;A2RU29;Q4VBZ9;Q14149 MORC3 MORC family CW-type zinc finger protein 3 yes no 0 0 0 2.5 0.5 1 1 54.853 54.888 3 0.080503 16564 20230619_1881_Aki_TMTPro18x_K_F2 38.3 19.057 27342 23363 30336 30993 32277 33212 35089 33509 39555 33502 33420 35433 34612 32785 35104 35543 49225 33205 25313 21447 30600 30702 33422 33425 35350 34218 39789 33930 34653 35788 35357 34031 36461 35549 46851 31622 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75567000 687 1915 660 1246;1247 1020 1020 1 9606 Homo sapiens 0.1090556796546025 AEIIQER Acetyl (Protein N-term) 899.47125 0.47124585 4630 Q9NYH9;B4DSL9;B7Z9G4 UTP6 U3 small nucleolar RNA-associated protein 6 homolog yes no 1 0 0 1 0 1 45.545 45.545 2 0.0050847 12510 20230619_1880_Aki_TMTPro18x_K_F1 114.54 88.431 17687 12801 17128 17102 19071 20373 17557 19977 24039 23806 28321 23190 25197 20393 20397 27146 23363 26816 16339 11760 17472 16961 19623 20344 18004 20526 24288 23836 28673 23502 25578 21491 21030 27130 22349 25461 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22335000 688 4630 661 1248 1021 1021 1 9606 Homo sapiens 0.017489080007521807 AEIISLCK Unmodified 932.5001 0.50010314 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1;H7C1K0 SRRT Serrate RNA effector molecule homolog yes no 0 0 0 7.5 0.5 2 2 53.343 53.414 2;3 0.001059 15014 20230619_1888_Aki_TMTPro18x_K_F8 160.75 88.513 175270 154680 156990 195480 169180 202970 198320 188920 208090 206960 210180 203400 238580 187310 192700 252040 238380 230560 162010 141910 161450 194090 175700 204310 198550 194510 211580 208110 216720 206230 240350 197220 199600 250850 227590 219240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 803050000 689 4464 662 1249;1250;1251;1252 1022;1023 1023 2 9606 Homo sapiens 0.031153093055422687 AEILSLESR Unmodified 1016.5502 0.55022446 237 A0A024R3D4;Q8ND24;E9PN76;Q8ND24-2 DKFZp547C195;RNF214 RING finger protein 214 yes no 0 0 0 4 0 1 50.768 50.8 2 0.0064073 14334 20230619_1883_Aki_TMTPro18x_K_F4 104.2 47.15 93254 81873 94217 103590 98328 103400 96801 108190 120060 107600 119740 118010 112310 102570 111760 122510 119090 116720 86276 75116 95732 102830 101760 104700 98467 110170 120940 109100 122540 118840 114890 107320 114120 122450 113860 110930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92981000 690 237 663 1253 1024 1024 1 9606 Homo sapiens 0.04261135235049096 AEINILLCGDPGTSK Unmodified 1586.7974 0.79740737 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57;A0A3B3ITP6;A0A3B3IRR8 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 7 0 1 61.164 61.203 2 3.8521E-10 18307 20230619_1887_Aki_TMTPro18x_K_F7 186.13 158.65 95557 69521 95332 103410 67891 93495 102120 87293 95920 120280 117480 118260 135840 110950 101690 131170 129000 135130 88296 63945 96526 101470 73714 95082 100810 90568 99032 119700 120310 119890 136410 115800 105670 131620 123210 128290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 315580000 691 471 664 1254 1025 1025 1 9606 Homo sapiens 0.02748056600808013 AEISCTDNQDGTCSVSYLPVLPGDYSILVK Unmodified 3300.553 0.55300951 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4;Q6NXF2;Q96C61;B4DTD5 FLNA;FLJ00119 Filamin-A yes no 0 0 0 6.5 0.5 1 1 64.654 64.69 4 8.841E-10 20227 20230619_1886_Aki_TMTPro18x_K_F6 103.86 98.138 7631.8 5685.2 8145.2 8387.9 9151.4 10330 7839 8699 9280.7 9167.3 9623.4 10493 10694 11556 9203.5 11317 10818 11102 7056.9 5228.2 8247 8270.2 9393.5 10257 8030.7 9010 9391.7 9284.5 9909.6 10628 10828 11860 9485.9 11360 10337 10546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 415880000 692 3484 665 1255;1256 1026 1026 1 9606 Homo sapiens -0.005244872775620024 AEISDLDR Acetyl (Protein N-term) 959.45599 0.45598972 374 Q5U086;A0A024R625;P60510;H3BTA2;H3BV22;I3L4X0;H3BPN5;H3BVE3 PPP4C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 4 catalytic subunit yes no 1 0 0 1 0 1 47.477 47.477 2 2.0568E-05 13329 20230619_1880_Aki_TMTPro18x_K_F1 170.06 170.06 3600.8 3221.4 5006.9 3390.5 3809.8 4669 4818.9 5779.6 6731 5401.1 7092.5 6951.7 6015.9 6819.4 6599.2 5906.8 6913.7 6793.2 3342.3 2950.2 4942.4 3433.7 4082 4649 4864 5812.1 6753.9 5528.1 7212.4 6983.4 6213.1 6982.8 6713.7 6004.1 6611.1 6443.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38076000 693 374 666 1257 1027 1027 1 9606 Homo sapiens -0.025360035871017317 AEISFEDR Unmodified 965.44543 0.44542503 3484 P21333;P21333-2;Q60FE5;Q60FE6;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91;H0Y5C6 FLNA;FLJ00119 Filamin-A yes no 0 0 0 1.5 0.5 1 1 44.398 44.439 2 0.0065009 12059 20230619_1880_Aki_TMTPro18x_K_F1 110.38 62.932 143060 96676 125880 146040 205750 245010 198500 193690 233700 186280 201310 234090 199270 174360 208760 200380 223070 216060 132010 88968 130690 144590 207410 238910 201510 201150 234680 190210 208250 233330 203960 183160 212850 201870 213240 205070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202230000 694 3484 667 1258;1259 1028 1028 1 9606 Homo sapiens -0.03867986241516519 AEISFEDRK Unmodified 1093.5404 0.54038805 3484 P21333;P21333-2;Q60FE5;Q60FE6;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91;H0Y5C6 FLNA;FLJ00119 Filamin-A yes no 0 0 1 4.5 0.5 1 1 42.592 42.655 3 0.0035233 10734 20230619_1883_Aki_TMTPro18x_K_F4 86.18 48.989 174040 138590 153630 182270 209200 236620 199340 187060 277670 188900 223020 239880 221080 188520 238110 235950 238040 258510 160750 127250 158790 181090 212880 233970 203860 194630 275960 192590 231460 239490 226540 198660 241820 237620 227900 245220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 797050000 695 3484 668 1260;1261 1029 1029 1 9606 Homo sapiens -0.0026405277033063612 AEITFDDHK Unmodified 1074.4982 0.49818889 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 3.5 0.5 1 1 44.081 44.138 3 0.016167 11472 20230619_1882_Aki_TMTPro18x_K_F3 66.056 45.726 96341 67554 84913 101080 98942 102560 108760 107780 146580 117140 126500 131270 137600 132720 113350 157950 147530 131950 88917 62151 87517 99294 101960 103700 110210 110010 146290 118400 131220 132740 139090 138060 117810 156760 140720 125660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122800000 696 3299 669 1262;1263 1030 1030 1 9606 Homo sapiens -0.036080281787235435 AEITLVATKPEK Unmodified 1298.7446 0.74456717 1219 A0A140VK12;Q9UBF2;Q9H9B7;Q9UBF2-2;B3KND4;Q9NUP3 COPG2 Coatomer subunit gamma-2;Coatomer subunit gamma yes no 0 0 1 8 0 1 49.689 49.762 3 2.1453E-05 13415 20230619_1888_Aki_TMTPro18x_K_F8 128.85 114.4 135230 99591 115960 122760 136250 135090 157450 126400 162910 134420 137980 147500 163660 115070 157720 171310 143720 164340 124810 91410 119750 122240 140380 135510 157570 130050 164610 135880 143980 148090 165760 122830 159800 170800 137790 156090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102450000 697 1219 670 1264 1031 1031 1 9606 Homo sapiens 0.10714466600325068 AEKDEPGAWEETFK Unmodified 1635.7417 0.74166663 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 1 3 0.816 1 1 1 52.208 52.251 3;4 0.00071944 14995 20230619_1883_Aki_TMTPro18x_K_F4 92.935 75.856 169160 141290 183720 196710 186910 214220 231730 203070 190790 214820 229170 153960 167600 124900 261690 121470 119840 110040 156550 129790 185590 194280 194950 214970 229770 208590 198230 214540 230330 158150 177140 129750 255850 121980 115970 104670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 231990000 698 3900;2497 671 1265;1266;1267 1032;1033;1034 1034 3 9606 Homo sapiens -0.05077453315175262 AELAELPLR Unmodified 1010.576 0.57604528 4389 Q96QK1;Q53FR4;Q5HYM2 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 4.5 0.5 1 1 53.793 53.835 2 0.00051064 15359 20230619_1885_Aki_TMTPro18x_K_F5 133.23 81.889 410620 342600 383220 409220 383070 426350 463010 439780 514110 463620 441330 444510 521610 454290 362550 602390 542050 616710 379530 314210 391770 408110 400140 430180 463690 449060 517960 466850 459600 452780 522570 476160 382730 602970 517410 585330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 482900000 699 4389 672 1268;1269 1035;1036 1036 2 9606 Homo sapiens 0.07118029477328491 AELAESR Unmodified 774.38718 0.38718187 1095 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;A0A494C0P6;Q6LDX7 TPM3;DKFZp686J1372;TPM3-ROS1 Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor yes no 0 0 0 1.5 0.5 1 1 33.026 33.055 2 0.0061091 6871 20230619_1881_Aki_TMTPro18x_K_F2 135.6 37.096 104260 43808 135870 140670 210880 207900 148500 201060 146110 96573 187560 191850 116510 137470 171350 56371 181670 170520 96357 40982 136500 134770 211130 204770 153470 202920 150340 106070 187500 188500 124010 139230 173190 64740 173640 160790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190780000 700 1095 673 1270;1271 1037 1037 1 9606 Homo sapiens -0.009036230961442016 AELAVFHR Unmodified 941.5083 0.50830006 1190 A0A140VJN9;Q9NTJ4-3;Q9NTJ4-2;Q9NTJ4;Q9NTJ4-4;B4DH23;Q59GG8;H3BSE5;H3BRI3;H3BQH9 MAN2C1 Alpha-mannosidase 2C1 yes no 0 0 0 7 0 1 43.133 43.212 3 0.00032282 10575 20230619_1887_Aki_TMTPro18x_K_F7 148.04 114.25 16712 14056 14514 16322 13949 15226 15701 15877 17646 15715 15994 17378 17402 12755 16592 18197 16838 17218 15439 12887 14928 16287 14587 15499 15793 16176 17799 15940 16561 17410 17664 13603 16909 18139 16111 16363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12365000 701 1190 674 1272 1038 1038 1 9606 Homo sapiens 0.035206243371817436 AELDDTPMR Oxidation (M) 1062.4652 0.4651742 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 1 0 1.5 0.5 1 1 36.229 36.258 2 0.051856 8178 20230619_1881_Aki_TMTPro18x_K_F2 64.268 44.481 184340 130170 186410 191160 239720 223320 224910 217680 267900 224730 248010 250890 262080 229040 215530 260420 299710 261780 170320 119730 189980 188410 244090 223290 228920 222970 269610 227640 255980 252820 264970 238600 224860 261160 285680 248760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 854120000 702 1450 675 1273;1274 1039;1040 1040 941 2 9606 Homo sapiens -0.0635597829307244 AELDDTPMR Unmodified 1046.4703 0.47025958 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 1.5 0.5 1 1 42.046 42.086 2 2.2311E-08 10795 20230619_1881_Aki_TMTPro18x_K_F2 209.84 183.95 889120 759400 832710 856250 942120 1015500 961830 903500 1152800 1013100 1090800 1003900 1197700 917670 873540 1274900 1259700 1105200 821940 696020 852350 859060 970630 1012500 974420 933780 1160900 1018200 1125800 1017600 1203300 968570 917440 1264700 1200400 1052100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1213700000 703 1450 675 1275;1276 1041;1042;1043 1043 3 9606 Homo sapiens -0.05111674430440871 AELDGTILK Unmodified 958.53351 0.53351176 2614 B4DWI8;Q8WXF1;A0A024RDP4;Q8WXF1-2;X6RDA4 PSPC1 Paraspeckle component 1 yes no 0 0 0 5 0.816 1 1 1 53.124 53.18 2 8.4754E-06 15454 20230619_1883_Aki_TMTPro18x_K_F4 176.79 83.53 286720 252270 270680 323150 299620 348940 303320 292570 356310 407700 407680 430330 427680 357250 371650 454540 435290 455190 265130 231480 277060 320720 309270 349570 307310 305950 362360 406500 416840 433260 433180 376090 382890 455000 416000 432260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 268820000 704 2614 676 1277;1278;1279 1044;1045 1044 2 9606 Homo sapiens 0.05258634349104341 AELEIQK Unmodified 829.45453 0.45453316 3401 P07741;H3BQZ9;P07741-2;H3BQB1 APRT Adenine phosphoribosyltransferase yes no 0 0 0 4 0.816 1 1 1 47.067 47.133 2 0.011098 12678 20230619_1883_Aki_TMTPro18x_K_F4 112.37 23.324 1077800 759730 970490 966020 1039800 1140500 1143300 1147400 1440300 1359600 1582500 1485000 1498700 1206000 1249500 1464200 1658400 1466800 994960 697670 995840 961100 1078000 1140200 1156100 1177200 1455600 1366600 1612200 1492800 1520200 1267100 1298600 1466800 1581500 1393800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1039099999.9999999 705 3401 677 1280;1281;1282 1046 1046 1 9606 Homo sapiens 0.032984071148121075 AELEQHLEQEQEFQVNK Unmodified 2097.9967 0.99671212 41 Q05CP8;A0A024QZJ7;Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes no 0 0 0 2 0 1 51.812 51.851 3 2.2552E-10 15249 20230619_1881_Aki_TMTPro18x_K_F2 134.82 121.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 706 41 678 1283 1047 1047 1 9606 Homo sapiens -0.008366366375867074 AELFTQSCADLDK Unmodified 1496.6817 0.68170891 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 4 0.816 1 1 1 55.809 55.847 3 0.00010025 16575 20230619_1883_Aki_TMTPro18x_K_F4 101.32 93.596 109210 88071 92394 86893 77190 104270 115510 102430 123860 106610 110150 104220 123490 82400 103980 138200 152610 153100 100840 80645 95036 88162 82590 104080 114460 104900 125090 107470 114200 105280 124600 88814 108950 138670 145550 145250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 356850000 707 2337;3778;3779 679 1284;1285;1286 1048 1048 1 9606 Homo sapiens -0.046764672500557936 AELGALPDDFIDSLEK Unmodified 1731.8567 0.85669639 2141 A8K9T8;Q9BYT8;B3KU23;E9PCB6 NLN Neurolysin, mitochondrial yes no 0 0 0 2.5 1.12 1 1 1 1 64.641 64.653 3 0.048507 20446 20230619_1882_Aki_TMTPro18x_K_F3 43.798 29.108 6431.1 5891 5502.8 7405 6212.7 8927.1 7927.7 7246.5 7642.6 9133.2 10607 9318.5 9002.9 9837.3 10344 9551.5 9112.3 11900 5944 5403.7 5693.5 7368.9 6459 8867.4 7884 7571.5 7921.2 9135.7 10668 9473.1 9314.2 10110 10424 9737.7 8749.8 11268 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118400000 708 2141 680 1287;1288;1289;1290 1049 1049 1 9606 Homo sapiens 0.020042310959752285 AELGEADEAELQR Acetyl (Protein N-term) 1471.6791 0.67906638 4747 Q9Y5J9;E9PIR3 TIMM8B Mitochondrial import inner membrane translocase subunit Tim8 B yes no 1 0 0 1 0 1 50.56 50.56 2 1.3613999999999998E-21 14608 20230619_1880_Aki_TMTPro18x_K_F1 208.11 195.88 14825 13421 11177 16703 11680 20745 18486 20426 21029 14597 18130 19695 22135 19452 18657 18290 20146 22233 13689 12310 11714 16643 12347 20637 18317 20728 21134 15232 18923 19760 22304 20012 19113 18623 19276 21068 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153190000 709 4747 681 1291 1050 1050 1 9606 Homo sapiens -0.037905993833419416 AELGEYIR Unmodified 949.4869 0.48689592 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4 0 1 48.139 48.179 2 1.5629E-05 13131 20230619_1883_Aki_TMTPro18x_K_F4 142.36 81.401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 710 3881 682 1292 1051 1051 1 9606 Homo sapiens 0.010131945177931811 AELLDNEK Unmodified 930.46583 0.46582612 552 Q6NVY0;A0A024R904;Q9HB71;Q9HB71-3;B4DFD3;Q9HB71-2 CACYBP Calcyclin-binding protein yes no 0 0 0 3 0 1 46.809 46.888 2 0.058426 12719 20230619_1882_Aki_TMTPro18x_K_F3 74.173 37.616 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 711 552 683 1293 1052 1052 1 9606 Homo sapiens -0.0021881558170662174 AELLLPEADRPGPR Unmodified 1532.8311 0.83109076 3233 O15069 NACAD NAC-alpha domain-containing protein 1 yes yes 0 0 1 5 0 1 48.687 48.764 3 1.7279E-08 13215 20230619_1885_Aki_TMTPro18x_K_F5 150.22 105.08 43031 29446 39416 45971 45676 43195 44084 47771 58060 44764 49480 46115 42990 42090 51451 52939 52781 63812 39722 27108 40462 45010 46881 43993 44979 48405 57969 45463 50879 46654 44531 44120 52258 53621 50564 60453 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60054000 712 3233 684 1294 1053 1053 1 9606 Homo sapiens 0.0859884615485953 AELMEISEDK Unmodified 1163.538 0.53800479 2662 B5BUB5;P05455;E7ERC4;E9PGX9;E9PFL9 SSB Lupus La protein yes no 0 0 0 1.5 0.5 1 1 54.689 54.701 3 0.00017451 16468 20230619_1881_Aki_TMTPro18x_K_F2 98.254 63.367 44951 33364 39827 46282 42171 53817 46987 46959 68304 62223 59073 75126 69812 66048 52817 92055 87597 110100 41502 30660 40968 45753 43857 53663 47743 48860 68017 62489 61598 75364 70201 69799 56152 92955 83632 104300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142960000 713 2662 685 1295;1296 1054 1054 1 9606 Homo sapiens -0.03722269290301483 AELNEFLTR Unmodified 1091.5611 0.56112349 3494 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;E9PPU1;H0YCJ7;F2Z2S8;H0YF32;E9PK82;E9PJH4;E9PQ96;E9PQX2;H0YES8 RPS3 40S ribosomal protein S3 yes no 0 0 0 4.5 0.5 1 1 54.665 54.704 2 0.0012204 16069 20230619_1883_Aki_TMTPro18x_K_F4 134.51 120.92 845850 736820 778000 836540 757260 859340 862750 875380 891430 975980 973610 954460 1149100 871140 884240 1137400 989970 1009200 781930 675320 796030 837190 791270 867780 864980 895860 910480 980070 1002400 967500 1153900 915770 911050 1130800 946310 959840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2554300000 714 3494 686 1297;1298 1055;1056 1055 2 9606 Homo sapiens 0.01900537609321873 AELNPWPEYIYTR Unmodified 1650.8042 0.80420731 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;D6R9F8;D6RDJ6;D6RCA5 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 61.675 61.722 3 0.050862 18599 20230619_1887_Aki_TMTPro18x_K_F7 33.842 18.64 77760 67135 90353 101020 78025 91124 82722 83878 101660 88692 93132 99135 113920 97922 89971 126460 98986 116950 72024 61719 90610 99047 82179 92688 83767 86372 102140 89743 96886 100190 114490 102530 92618 125980 94746 111110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231520000 715 2326 687 1299;1300 1057 1057 1 9606 Homo sapiens 0.004837375437091396 AELPPGPGAVGR Unmodified 1119.6037 0.60365701 2898;4664 E7ERK9;Q9UI10;Q9HBP7;F8W8L6;Q9UI10-3;Q9UI10-2;B4DUP5 EIF2B4 Translation initiation factor eIF-2B subunit delta no no 0 0 0 5.5 0.5 1 1 43.036 43.123 2 0.0006655 10835 20230619_1886_Aki_TMTPro18x_K_F6 112.01 68.925 58900 52870 56681 64995 70578 76460 70805 68735 82803 75153 75553 94629 89327 66121 82815 78879 84063 86687 54479 48489 58025 64779 72221 76275 71732 70940 83403 76201 78601 94128 90353 69861 84371 79517 80437 82244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56770000 716 2898;4664 688 1301;1302 1058 1058 1 9606 Homo sapiens 0.04863932737566756 AELQQLR Acetyl (Protein N-term) 898.48723 0.48723027 2736 C9J2Y4;E7EQY1;Q96C01 FAM136A Protein FAM136A yes no 1 0 0 1 0 1 46.338 46.338 2 0.010465 12871 20230619_1880_Aki_TMTPro18x_K_F1 110.54 95.315 29221 19848 23994 26867 28817 28376 31613 28701 33222 27144 29862 25057 35366 26305 34674 31653 11275 7777.1 26951 18242 24897 26571 29608 28591 31749 29265 33606 27468 31015 25607 35827 27352 33965 30415 10990 7652.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27979000 717 2736 689 1303 1059 1059 1 9606 Homo sapiens 0.03392614237657199 AELQTALAHTQHAAR Unmodified 1616.8383 0.83830141 854 A0A087WYC0;A0A8I5KT73;A0A1W2PQY5;A0A8I5KNZ1;A0A8I5QJQ7;A0A6Q8KRG2;B7ZC06;A0A8I5KZ68;A0A8J9BZL8;Q08379;A0A8I5KZ34;A0A8I5KQL3;A0A8I5KUW5 GOLGA2 Golgin subfamily A member 2 yes no 0 0 0 7.5 0.5 1 1 38.634 38.659 4 0.012194 8968 20230619_1888_Aki_TMTPro18x_K_F8 66.387 51.511 47379 37627 42587 54228 65795 49458 57741 56718 62794 50285 65584 67592 59805 57290 60093 61856 69276 71241 43765 34584 44052 53316 66114 50588 58829 57296 63748 51699 66927 67500 61286 59648 61618 62611 66208 67558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64995000 718 854 690 1304;1305 1060 1060 1 9606 Homo sapiens 0.054555787553226764 AELSEEALLSVLPTIR Acetyl (Protein N-term) 1781.9775 0.97748023 1213 A0A140VJZ1;P45974-2;P45974;F5H571 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 1 0 0 4.5 0.5 1 1 68.574 68.602 2 1.3081000000000001E-33 21588 20230619_1885_Aki_TMTPro18x_K_F5 132.32 118.74 1923.3 2927.2 2199.7 4130.8 2041.5 3939 2871.2 4872 4068.7 2972.2 2464.6 1092 2333.8 2555.1 2527.3 2568.1 3315.5 5019.9 1785 2684.8 2201.8 4066.7 2169.8 4012.2 2886.9 4855.4 4009.9 2917.5 2462.2 1027 2364.9 2484.9 2530.9 2621.6 3153.2 4735.7 2 3 2 3 3 3 3 3 3 2 2 1 2 2 2 2 2 3 10819000 719 1213 691 1306;1307 1061;1062;1063 1063 3 9606 Homo sapiens 0.11777058809479968 AELSEGQVR Unmodified 987.49852 0.49852324 3083;2862 P09493-3;D9YZV5;P09493-4;Q15657;P09493-10;A0A0K0K1I0;P09493-8;Q8TCG4;H0YKX5;H0YL42;H7BYY1;B7Z596;F5H7S3;Q1ZYL5;P09493-2 TPM1 Tropomyosin alpha-1 chain no no 0 0 0 2.5 0.5 1 1 36.18 36.237 2 5.4607E-07 8171 20230619_1881_Aki_TMTPro18x_K_F2 193.29 131.94 153830 103060 190290 239610 596240 735160 463630 509440 754080 299690 385880 418310 434590 360580 383760 204930 441040 475360 142360 95470 196950 236600 584690 699850 483350 529750 735680 318890 415480 417030 439710 366060 393250 224180 421670 448510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 351340000 720 2862;3083 692 1308;1309 1064;1065 1064 2 9606 Homo sapiens 0.004273915411545204 AELTSSAPACYALAISPDSK Unmodified 2050.9881 0.98812127 1886 Q04727-3;Q04727;Q04727-4;Q04727-2;A0A994J7T6;B3KQ29;Q04724;B4DEF9;Q59EF7;B4E345 TLE4;TLE1 Transducin-like enhancer protein 4;Transducin-like enhancer protein 1 yes no 0 0 0 7 0 1 60.039 60.085 3 0.0001059 17776 20230619_1887_Aki_TMTPro18x_K_F7 74.325 65.505 32434 28870 30947 32784 26504 28868 32866 29871 35352 36698 34447 35860 46082 31529 32715 41898 41108 46379 29996 26459 31504 32748 28050 29526 32849 30648 35863 36693 35894 36297 45981 33262 34016 42155 39287 43985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59402000 721 1886 693 1310 1066 1066 1 9606 Homo sapiens 0.004666734016154805 AELVAISSSEDEGNLR Unmodified 1688.8217 0.82170787 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;E9PNZ4;A0A5F9ZGX0;E9PLY5;Q6ZSD7;E9PLY0;A0A669KBB0 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 0 2.5 0.5 1 1 52.394 52.445 3 0.00061167 15554 20230619_1881_Aki_TMTPro18x_K_F2 74.141 65.348 46960 40918 47309 48920 48252 54042 57389 51401 62330 58348 60714 53102 55713 45775 59303 53218 52892 57066 43443 37521 48061 48821 50290 54203 57473 52893 63139 58447 62113 53910 57167 47876 59855 53598 50698 54145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80882000 722 1566 694 1311;1312 1067 1067 1 9606 Homo sapiens 0.0048498828807623795 AELVQGQSAPVGMK Acetyl (Protein N-term) 1455.7392 0.73916421 507 A0A024R8A7;Q96I24;A0A494C1K6;A0A8V8TNQ2 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 1 0 0 4.5 0.5 1 1 57.017 57.05 3 0.00043899 16732 20230619_1885_Aki_TMTPro18x_K_F5 60.448 30.01 18699 15320 19749 18615 20183 20162 21479 21325 24451 24960 19329 19221 22682 19284 20233 24856 21929 23001 17299 14053 19972 18558 20946 20305 21674 21796 24561 24856 20221 19774 22931 20189 20737 24770 20972 21863 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55265000 723 507 695 1313;1314 1068 1068 1 9606 Homo sapiens 0.029524197461796575 AEMDEVER Oxidation (M) 993.40732 0.40732497 1901 A0RZB8;Q6URC4;O60610-2;O60610-3;O60610;A0A1E1ERW3;A0A2R8Y5N1 DIAPH1 Protein diaphanous homolog 1 yes no 0 1 0 1 0 1 29.964 29.964 2 0.020979 5972 20230619_1880_Aki_TMTPro18x_K_F1 82.279 66.125 18201 8783.5 17637 16796 16703 17545 15083 17604 19105 17118 21959 23930 22215 20826 21860 13628 32741 24495 16783 8124.3 17938 16306 17382 17675 15446 17965 19341 17535 22422 23857 22672 21209 22783 14449 31164 23181 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15597000 724 1901 696 1315 1069 1069 1215 1 9606 Homo sapiens -0.08964240218494979 AEMELGLR Oxidation (M) 933.45897 0.45896661 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;B3KRA9 HK1 Hexokinase-1;Hexokinase yes no 0 1 0 2.5 0.5 1 1 41.679 41.748 2 0.02544 10630 20230619_1881_Aki_TMTPro18x_K_F2 77.046 62.511 160130 135300 161500 191840 257650 269980 246430 254070 306800 181500 219270 209010 208900 178590 203470 197700 203000 190530 148110 124300 165610 190010 259660 266630 250820 258630 305210 188390 228580 210030 213310 186190 206940 198020 194140 181090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92473000 725 43 697 1316;1317 1070;1071 1071 16 2 9606 Homo sapiens -0.010424517339288286 AEMELGLR Unmodified 917.46405 0.46405199 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;B3KRA9 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 4 0 1 47.84 47.88 2 2.4163E-05 13021 20230619_1883_Aki_TMTPro18x_K_F4 133.9 89.291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 726 43 697 1318 1072 1072 1 9606 Homo sapiens 0.0020185212868000235 AEMETLVR Unmodified 947.47462 0.47461667 4008 Q53SW3;Q9BPU6;E7EWB4;E9PHT0;E7ESV0 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 3 0 1 45.202 45.278 2 0.052452 11961 20230619_1882_Aki_TMTPro18x_K_F3 70.69 49.83 197600 151500 203560 175290 150270 195420 152470 158770 205460 241810 239380 284060 292610 241840 194520 328600 351870 320110 182690 138940 205290 175420 160690 195230 155460 166970 207910 241200 246500 284970 292410 255430 208930 327920 334930 304250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145810000 727 4008 698 1319 1073 1073 1 9606 Homo sapiens -0.001221652168737819 AEMLLEEAK Unmodified 1032.5161 0.51614714 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;Q8TAS6 LAMB1 Laminin subunit beta-1 yes no 0 0 0 4 0 1 56.546 56.551 2 0.014286 16888 20230619_1883_Aki_TMTPro18x_K_F4 80.455 42.727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 728 3015 699 1320 1074 1074 1 9606 Homo sapiens 0.0011897075175966165 AEMTAAAEER Oxidation (M) 1093.471 0.47098786 1581 A0A5K1VW81;A0A6Q8PG44;A0A6Q8PGC3;A0A6Q8PGP6;A0A5F9ZHU6;A0A6Q8PH24;J3KNF5;A0A6Q8PH78;A0A6Q8PGB1;O15078 CEP290 Centrosomal protein of 290 kDa yes no 0 1 0 1.5 0.5 1 1 34.473 34.502 2 0.070985 7750 20230619_1880_Aki_TMTPro18x_K_F1 58.119 13.725 106430 52490 132520 128010 161350 187450 127320 147230 143550 116740 162670 180690 177610 149000 159840 80271 195550 182180 98368 48750 132850 123680 164420 183920 130980 152320 146010 121610 166780 179260 179930 151250 164350 87756 186660 172010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 306460000 729 1581 700 1321;1322 1075 1075 1036 1 9606 Homo sapiens -0.07200879781430558 AEMVVPDFSELFK Unmodified 1510.7378 0.73776723 466 A0A024R7P3;A0A024R7N2;Q9HD20-2;Q9HD20;H7C3H2 ATP13A1 Manganese-transporting ATPase 13A1 yes no 0 0 0 7 0.816 1 1 1 65.352 65.383 3 0.00065445 20102 20230619_1888_Aki_TMTPro18x_K_F8 89.959 68.409 12616 12381 12803 13946 12292 14523 13557 15988 14755 18188 16157 17065 17397 15216 17076 15423 16951 16299 11682 11342 12991 13969 12849 14677 13645 16282 15042 18218 16575 17299 17702 15769 17353 15553 16215 15474 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69356000 730 466 701 1323;1324;1325 1076 1076 1 9606 Homo sapiens 0.00282785657441309 AENDAQKPSLTR Unmodified 1328.6684 0.66844211 1359 A0A2R8YDC1;A0A2R8Y6V8;A8K2Q2;O15439-4;O15439-3;O15439-2;O15439;B7Z5H4 ABCC4 Multidrug resistance-associated protein 4 yes no 0 0 1 5 0 1 36.742 36.833 3 0.028251 8237 20230619_1885_Aki_TMTPro18x_K_F5 59.116 28.95 15008 11107 19057 21933 25353 24579 23037 26779 31109 24161 27500 28285 28256 23368 24709 22095 25226 23812 13900 10255 19131 21275 25748 24691 23615 27123 31072 24690 28418 28350 28639 24201 25201 22335 24122 22604 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16161000 731 1359 702 1326 1077 1077 1 9606 Homo sapiens 0.017254627528927813 AENDVDNELLDYEDDEVETAAGGDGAEAPAK Acetyl (Protein N-term) 3263.375 0.37496461 724 Q13838-2;A0A024RCM3;Q13838;Q5STU3;F6WLT2;F6TRA5;A0A0A0MT12;F6S4E6;F6R6M7;Q7KYK3;B4DH55;F6U6E2;A0A286SD52;A0A0G2JHN7;F6S2B7 DDX39B;hCG_2005638;BAT1 Spliceosome RNA helicase DDX39B yes no 1 0 0 1 0 1 63.968 63.968 3 2.7036E-12 20119 20230619_1880_Aki_TMTPro18x_K_F1 77.522 75.358 21851 14897 16490 21264 17844 21900 21915 19932 24648 23367 26889 33362 31269 29185 22669 38803 35358 45581 20143 13699 17251 20945 18569 22041 21938 20607 25040 23741 27709 33279 31399 30743 23996 39161 33778 43184 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31792000 732 724 703 1327 1078 1078 1 9606 Homo sapiens -0.1661878746194816 AENFFILR Unmodified 1008.5393 0.53926584 2997 F8WCF6;P59998;F8WDD7;A0A0A6YYG9;P59998-3;P59998-2;R4GN08;P59998-4 ARPC4-TTLL3;ARPC4 Actin-related protein 2/3 complex subunit 4 yes no 0 0 0 1.5 0.5 1 1 59.61 59.617 2 0.0036592 18482 20230619_1881_Aki_TMTPro18x_K_F2 118.74 57.771 261960 235340 234950 264180 304230 369290 255990 280980 333460 171030 147220 130740 138550 118600 216900 183370 161080 141710 242170 215650 242140 265750 309720 363350 263250 290100 327530 177900 159490 134360 145470 126140 215910 181010 154530 135110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 291410000 733 2997 704 1328;1329 1079 1079 1 9606 Homo sapiens 0.035337776514325014 AENHCELLSPAR Acetyl (Protein N-term) 1437.6671 0.6670619 3076 H3BSS5;Q9NXV2 KCTD5 BTB/POZ domain-containing protein KCTD5 yes no 1 0 0 1 0 1 38.68 38.68 2 6.6004E-13 9526 20230619_1880_Aki_TMTPro18x_K_F1 105.98 98.329 14559 11413 19276 19091 24622 21512 18732 18468 26164 22421 29615 29109 21794 22385 24752 24103 32457 30970 13495 10510 19258 18669 24950 21505 19466 19189 26350 22660 29877 29018 22667 23391 25539 24580 30970 29348 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19181000 734 3076 705 1330 1080 1080 1 9606 Homo sapiens -0.03426494607492714 AENLGEVLR Unmodified 999.53491 0.53490874 7 B4DKC1;A0A0C4DFM1;A0A024QYR3;Q92544;Q6ZTK5 TM9SF4 Transmembrane 9 superfamily member 4 yes no 0 0 0 4 0 1 47.834 47.874 2 0.00016791 13018 20230619_1883_Aki_TMTPro18x_K_F4 122.26 71.651 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 735 7 706 1331 1081 1081 1 9606 Homo sapiens 0.035122684378507074 AENLLDGPPNPK Acetyl (Protein N-term) 1305.6565 0.65648044 4306 Q92793-2;Q92793;Q712H4;Q9BYU2 CREBBP;CBP/MOZ;CBP/MORF CREB-binding protein yes no 1 0 0 3 0 1 58.03 58.061 2 0.0017585 17624 20230619_1882_Aki_TMTPro18x_K_F3 70.256 56.261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 736 4306 707 1332 1082 1082 1 9606 Homo sapiens 0.015878460097155767 AENNSEVGASGYGVPGPTWDR Unmodified 2161.9665 0.96647463 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 3.5 0.5 1 1 51.361 51.41 3 1.8347E-45 14766 20230619_1882_Aki_TMTPro18x_K_F3 258.37 249.55 96897 82480 102310 108300 96760 122790 113410 110820 125730 127770 136140 159280 142470 128880 123270 150230 152070 165480 89662 75711 103460 107420 101500 122740 113790 114520 127820 129170 139610 159170 144370 135040 127430 151400 145310 156970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 605790000 737 3811 708 1333;1334 1083;1084 1083 2 9606 Homo sapiens -0.06802995302768977 AENQVLAMR Oxidation (M) 1046.5179 0.51787847 3626 Q53HT6;Q53G72;P51572;P51572-2;A0A2R8Y5M6 BCAP31 B-cell receptor-associated protein 31 yes no 0 1 0 4 0 1 36.61 36.656 2 0.074511 8164 20230619_1883_Aki_TMTPro18x_K_F4 59.368 37.84 75024 63946 65894 71481 103240 115140 95319 93005 132900 40991 43908 42189 47140 36163 54410 46278 55349 37715 69321 58605 68306 72134 104170 112590 97610 95129 129420 44453 49387 42638 48380 38040 55197 45897 52826 35978 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76804000 738 3626 709 1335 1085 1085 2315 1 9606 Homo sapiens -0.0035197543961658084 AENSQLTER Unmodified 1046.4993 0.49925152 1989 Q9P2E9;A7BI36;Q9P2E9-3;A1A5C5;A1A5C4;F8W7S5 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 1.5 0.5 1 1 31.407 31.47 2 0.0018859 6300 20230619_1881_Aki_TMTPro18x_K_F2 111.61 80.228 15312 9287 23167 16504 25492 28914 21847 26814 26699 14855 29738 34490 22178 22285 30453 10683 33350 29223 14196 8569.4 22875 16238 26189 28226 22414 27200 26977 16260 30083 33676 23291 22772 30866 12027 31852 27575 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11957000 739 1989 710 1336;1337 1086;1087 1087 2 9606 Homo sapiens -0.022138138098171112 AENTQFVK Unmodified 935.47125 0.47124585 3103 I3L159;I3L1F5;Q6IBP2;Q6FHB5;Q53HF1;P30519;A0A087WT44;P30519-2;I3L276;I3L4P8;A0A1B0GXH0;I3L463 HMOX2 Heme oxygenase 2 yes no 0 0 0 5.5 0.5 1 1 42.579 42.668 2 1.2869E-06 10615 20230619_1886_Aki_TMTPro18x_K_F6 195.06 150.37 147870 89294 162630 168970 182790 197900 184130 188230 215680 184580 214910 230400 243260 188800 198030 152360 267150 253270 136620 82473 164320 164340 188260 197570 186580 192870 217830 188170 221840 230220 245150 194430 205700 159500 254840 239540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102190000 740 3103 711 1338;1339 1088;1089 1089 2 9606 Homo sapiens 0.0009290800077224048 AENYDIPSADR Unmodified 1249.5575 0.55749468 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2;Q8WY81 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 2 0.816 1 1 1 41.498 41.544 2 1.6103E-12 10495 20230619_1881_Aki_TMTPro18x_K_F2 214.67 187.88 638880 531650 525600 585840 648920 732360 676740 668690 758970 858230 1007900 939350 882070 820850 804930 970050 1044400 985930 589950 487220 545620 589200 665490 728130 683360 692490 778590 859530 1016200 946250 901170 858170 833990 972860 996520 936490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1203100000 741 134 712 1340;1341;1342 1090;1091 1091 2 9606 Homo sapiens -0.057301769551941106 AEPASVAAESLAGSR Acetyl (Protein N-term) 1456.7158 0.71578623 4577 Q9NQT5;Q9NQT5-2 EXOSC3 Exosome complex component RRP40 yes no 1 0 0 1.5 0.5 1 1 53.557 53.571 2 5.8145000000000005E-25 16012 20230619_1881_Aki_TMTPro18x_K_F2 157.68 145.63 25832 23068 27103 28615 26643 35536 35549 32230 42144 38068 38847 33100 39067 32793 32488 46411 38995 45827 23909 21158 27444 28531 27998 35316 35515 33310 42412 38028 39975 33860 39558 34567 33592 46339 37294 43508 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172690000 742 4577 713 1343;1344 1092 1092 1 9606 Homo sapiens 0.0056969723323163635 AEPDHMVLGK Oxidation (M) 1111.5332 0.53319418 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2;Q7L4K8 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 1 0 3.5 0.5 1 1 38.369 38.418 3 0.0096749 8885 20230619_1883_Aki_TMTPro18x_K_F4 66.92 43.069 97729 80018 87959 94939 119880 123520 120770 112960 141260 104950 121810 130680 117600 104970 122410 114490 141870 123180 90293 73386 90690 95029 121990 122520 122280 115930 141850 107350 125800 130600 120450 109600 125410 115420 135420 116970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59227000 743 1736 714 1345;1346 1093 1093 1136 1 9606 Homo sapiens -0.018111086423914458 AEPDHMVLGK Unmodified 1095.5383 0.53827956 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2;Q7L4K8 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 4 0 1 43.388 43.432 3 0.00046153 11019 20230619_1883_Aki_TMTPro18x_K_F4 88.056 74.247 70273 51629 60907 71922 66711 69903 75763 67998 91283 79084 81432 81534 76780 71248 89632 79946 79302 74716 64866 47450 62804 70911 69088 70795 76313 69935 91684 79438 83844 82299 79153 74255 90293 79953 75943 71038 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70636000 744 1736 714 1347 1094 1094 1 9606 Homo sapiens -0.005668047797826148 AEPDYIEDDNPELIRPQK Acetyl (Protein N-term) 2183.0382 0.038242585 1283 C9J3Q3;C9J6N5;C9JQ40;C9JW51;A0A1C7CYX8;Q9H098;C9JYP1;C9J6Y8;X6RET8;C9JP05;F8WCJ2 FAM107B Protein FAM107B yes no 1 0 1 1.33 0.471 2 1 55.743 55.75 2;3 1.063E-13 16897 20230619_1881_Aki_TMTPro18x_K_F2 136.34 132.54 83008 74725 80307 101040 68101 78110 81974 88647 98706 136760 117910 92960 130060 100390 97933 154060 131190 135410 76783 68600 81743 99543 72125 80964 82425 91107 100580 134240 120390 96737 130780 106220 102300 152720 125230 128790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 733240000 745 1283 715 1348;1349;1350 1095;1096 1096 2 9606 Homo sapiens -0.005955006688964204 AEPEDHYFLLTEPPLNTPENR Unmodified 2481.1812 0.18121843 622 P61158;A0A024RAI1;Q59FV6;B4DXW1;B4DT29;F8WDR7 ACTR3 Actin-related protein 3 yes no 0 0 0 2.75 1.48 1 1 1 1 57.291 57.318 3 4.9757E-30 17520 20230619_1881_Aki_TMTPro18x_K_F2 203.89 192.69 45994 42327 43622 50864 46197 54713 50024 46637 50530 53997 54777 61138 60209 47800 52277 59269 56362 57079 42544 38808 44598 50705 47910 54848 50237 48424 51651 54386 56283 61266 60875 50358 53563 59237 53892 54235 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 446770000 746 622 716 1351;1352;1353;1354 1097;1098;1099 1097 3 9606 Homo sapiens -0.0001249327765435737 AEPGEGTRPATVGDSSAR Unmodified 1756.834 0.83400389 4430 Q9BTC0 DIDO1 Death-inducer obliterator 1 yes yes 0 0 1 2.5 0.5 1 1 31.201 31.275 3 7.4986E-15 6202 20230619_1881_Aki_TMTPro18x_K_F2 169.02 138.88 20218 12483 19704 22871 25974 26089 29309 27379 36360 23564 32109 31568 32586 25123 25923 31763 37125 29676 18662 11523 20176 22267 26560 26153 29556 27787 36415 24284 33152 31489 32922 26479 27125 31680 35361 28236 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51153000 747 4430 717 1355;1356 1100;1101 1100 2 9606 Homo sapiens -0.014139752489199964 AEPMQWASLELPAAK Oxidation (M) 1656.8181 0.81814282 228 A0A024R394;Q9UHD1;A0A024R3C3;Q9UHD1-2;E9PHZ2;Q9NZ93 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes no 0 1 0 7 0 1 60.266 60.31 3 8.4498E-06 17955 20230619_1887_Aki_TMTPro18x_K_F7 112.5 99.087 24570 20219 20543 24647 21112 25867 25392 24078 31772 27993 29915 29651 32225 22034 24656 39940 35478 30692 22689 18547 21241 24538 22038 26019 25545 24834 31920 28137 30869 29797 32434 23934 25886 39280 33807 29267 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30573000 748 228 718 1357 1102 1102 138 1 9606 Homo sapiens 0.016006469805006418 AEPPKAPEQEQAAPGPAAGGEAPK Unmodified 2297.1288 0.12878893 3759 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 1 4 0 1 41.832 41.875 4 3.134E-09 10327 20230619_1883_Aki_TMTPro18x_K_F4 120 108.35 155520 130740 144640 129820 126970 125460 105460 95797 94703 139460 184180 151520 154710 129090 170830 113120 145440 118140 143750 119700 147400 131230 132590 126670 107440 101180 100760 138900 183290 152530 159470 133070 171690 114450 139210 112260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 500980000 749 3759 719 1358 1103;1104;1105 1103 3 9606 Homo sapiens 0.03210968379426049 AEPPLNASASDQGEK Unmodified 1512.7056 0.70561548 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;B7Z766;A0A8Q3SHL4 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 2.5 0.5 1 1 42.374 42.447 3 5.4074E-08 10966 20230619_1881_Aki_TMTPro18x_K_F2 137.39 123.72 118100 103540 117350 127700 102270 106870 113560 118500 127040 131470 160970 156310 147260 134570 165850 145150 171050 160650 109250 94967 119090 126720 107690 109950 114360 120650 129980 132890 162980 156840 151660 140050 168490 146640 163540 152460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105940000 750 874 720 1359;1360 1106;1107 1106 2 9606 Homo sapiens -0.030229104920408645 AEPPQAMNALMR Unmodified 1327.6377 0.63767603 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 7 0.816 1 1 1 49.843 49.92 2 1.3201E-06 13478 20230619_1888_Aki_TMTPro18x_K_F8 156.16 129.56 87587 70174 84118 86370 67943 94864 97766 98908 104260 98419 88160 86902 106610 82266 95240 105840 95550 92257 80952 64387 85546 86026 72807 95318 97054 100730 105220 99144 92023 88614 107630 86292 97120 105200 91396 87782 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 332350000 751 3823 721 1361;1362;1363 1108 1108 1 9606 Homo sapiens -0.013037301573831428 AEPQPPSGGLTDEAALSCCSDADPSTK Acetyl (Protein N-term) 2802.196 0.19601815 3793 X5DNM4;V9HW62;Q04760-2;Q04760 GLO1;HEL-S-74 Lactoylglutathione lyase yes no 1 0 0 1.5 0.5 1 1 56.846 56.854 3 0.0051372 17340 20230619_1881_Aki_TMTPro18x_K_F2 66.282 59.558 63206 51639 52564 76060 56562 52171 59552 56455 102670 67843 67794 80434 92734 79895 55684 132290 119910 126830 58363 47470 54466 74437 58548 54684 61159 57755 100680 68437 72313 81169 92209 85183 61246 131520 114150 120500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 209770000 752 3793 722 1364;1365 1109;1110 1110 2 9606 Homo sapiens -0.1329920204480004 AEPSFYPR Unmodified 965.46068 0.46068117 4534 Q9H8H0;J3QR28 NOL11 Nucleolar protein 11 yes no 0 0 0 5.5 0.5 1 1 43.713 43.799 2 0.0010826 11134 20230619_1886_Aki_TMTPro18x_K_F6 149.4 103.38 128940 102310 111020 121050 120040 148030 128140 133170 157280 131410 133240 132180 134350 110960 121770 143590 166840 121960 119060 93842 114480 121060 124410 147260 129640 136990 157560 132980 137860 133470 136540 116870 126640 142510 158890 116240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 103170000 753 4534 723 1366;1367 1111 1111 1 9606 Homo sapiens -0.023430746536746483 AEPSGAETRPPIR Acetyl (Protein N-term) 1421.7263 0.72629134 2631 B4DZF6;Q59F94;Q9NRR5;Q9H8R7;Q9NRR5-2 UBQLN4 Ubiquilin-4 yes no 1 0 1 1.5 0.5 1 1 34.374 34.403 2 2.6279E-06 7695 20230619_1880_Aki_TMTPro18x_K_F1 114.51 91.442 6917.8 4119.5 7053.3 9878.2 11314 11854 7639.9 11078 8765.1 9600.4 11926 12248 11998 10995 10711 10256 13512 14036 6386.9 3820.6 7232.3 9511.8 11313 11808 7963.2 11322 8998.6 9858.2 12091 12271 12188 11345 11066 10532 12905 13290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132870000 754 2631 724 1368;1369 1112;1113 1112 2 9606 Homo sapiens 0.03229724678317325 AEPTAAPHPVLK Unmodified 1229.6768 0.67682195 459 A0A024R7K7;A0A024R7M6;Q86YP4-2;Q86YP4;Q86YP4-3;B4DKZ7;B4E0Q6 GATAD2A Transcriptional repressor p66-alpha yes no 0 0 0 6.5 0.5 1 1 40.39 40.47 3 7.0365E-05 9437 20230619_1887_Aki_TMTPro18x_K_F7 115.04 91.288 196710 139540 158290 159960 166050 177100 179200 166500 191900 212180 211820 204220 245030 189160 186730 239810 242300 214520 181450 128010 164100 160150 172270 177610 180330 172070 195740 211730 217740 207240 246160 198370 194250 238610 231100 204120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136530000 755 459 725 1370;1371 1114;1115 1115 2 9606 Homo sapiens 0.07117061460166951 AEPTHWCLLVR Unmodified 1380.6972 0.69723982 2834 D3DWL9;Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes no 0 0 0 1 0 1 49.495 49.495 3 2.8417E-06 14149 20230619_1880_Aki_TMTPro18x_K_F1 147.3 114.3 41483 39279 43599 41725 37481 52423 46324 45251 55173 47187 55233 54197 54004 52293 46116 56928 61734 67637 38412 35969 44026 42097 39745 52019 46478 46778 55666 47828 56595 54659 54841 54236 47956 57698 58956 64107 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81829000 756 2834 726 1372 1116 1116 1 9606 Homo sapiens 0.02211908848312305 AEPTVCSFLTK Acetyl (Protein N-term) 1293.6275 0.6274885 4358 Q96H79;Q96H79-2 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes no 1 0 0 5 0 1 62.952 62.999 2 4.2199E-08 19283 20230619_1885_Aki_TMTPro18x_K_F5 105.4 81.968 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 757 4358 727 1373 1117 1117 1 9606 Homo sapiens -0.007580146109376074 AEPVEVVAPR Unmodified 1065.5819 0.58185893 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 3.5 1.12 1 1 1 1 42.983 43.051 2 0.00051657 10866 20230619_1882_Aki_TMTPro18x_K_F3 132.84 100.91 536870 433150 456580 560830 565020 649120 626580 573820 683190 624770 737810 730650 703090 620370 650410 739490 743170 741170 495770 397620 472860 556790 580340 647840 629730 593000 694630 632070 752850 733410 716370 649670 667920 741080 710150 703950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1987699999.9999998 758 261 728 1374;1375;1376;1377 1118;1119 1119 2 9606 Homo sapiens 0.05169127988983746 AEPWGNELASAAAR Acetyl (Protein N-term) 1483.7056 0.7055559 3584 P42773;Q6ICV4;Q9P1T2 CDKN2C Cyclin-dependent kinase 4 inhibitor C yes no 1 0 0 2.5 0.5 1 1 60.048 60.068 2 7.83E-07 18632 20230619_1881_Aki_TMTPro18x_K_F2 127.42 108.68 26564 22280 23775 24460 25495 24307 26223 32308 33821 27838 23826 26521 31781 26834 29166 30790 29669 32892 24546 20417 24407 24542 26354 24790 26643 32309 33631 28336 25287 26994 32063 27888 29741 30991 28405 31207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48572000 759 3584 729 1378;1379 1120 1120 1 9606 Homo sapiens -0.016948657013244883 AEPYCSVLPGFTFIQHLPLSER Unmodified 2560.2784 0.27843005 95 Q9BUJ2;A0A0A0MRA5;Q9BUJ2-2;Q9BUJ2-4;A8K6U7;A8K3W4;B7Z4B8;A0A024R0J9;Q9BUJ2-3;A8K5K0;M0QYZ0;M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 2 0 1 63.675 63.684 3 2.1993999999999998E-23 20262 20230619_1881_Aki_TMTPro18x_K_F2 179.58 170.76 18586 13581 21096 20581 15786 16336 18574 16712 18921 19452 21207 18075 23122 15130 19590 20710 20645 23303 17194 12494 21134 20151 16873 16849 18590 17137 19350 19467 21712 18326 23336 16028 20048 20861 19762 22096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28638000 760 95 730 1380 1121 1121 1 9606 Homo sapiens 0.06070197397593802 AEQEPTAEQLAQIAAENEEDEHSVNYKPPAQK Acetyl (Protein N-term) 3605.6758 0.6757785 3634 V9HWE8;P52565;J3KTF8;J3QQX2;J3QW41;A0A0S2Z3D9;J3KRE2;J3KRY1;P52565-2;J3KS60 HEL-S-47e;ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 1 0 1 2.5 0.5 1 1 57.688 57.712 3 1.5548E-15 17663 20230619_1881_Aki_TMTPro18x_K_F2 106.39 105.23 17059 13899 14582 18251 12429 15642 18687 14427 14790 23435 23180 19756 22059 20977 21612 26847 24279 23244 15738 12761 15014 18032 13130 15984 18356 14972 15511 23079 23321 20162 22542 21897 22161 26668 23197 22120 1 2 2 2 1 2 2 1 1 2 2 1 2 2 2 2 2 2 209420000 761 3634 731 1381;1382 1122 1122 1 9606 Homo sapiens -0.02283236020912227 AEQEQDGKPSPGDR Unmodified 1512.6805 0.68046336 1040 B7WPD9;A0A0G2JR66;Q2KJY2-2;Q2KJY2 KIF26B Kinesin-like protein;Kinesin-like protein KIF26B yes no 0 0 1 2 0 1 32.201 32.262 3 0.030096 6616 20230619_1881_Aki_TMTPro18x_K_F2 55.724 42.524 5634.6 1676.7 5912.4 6932.3 7264.7 7582.1 5669.1 6890.7 7888.8 5219.9 9096.3 12633 7072.4 8411.9 8817.6 4457.2 9661.1 9346.1 5191.6 1584.8 6007.5 6564.2 7396.4 7591.1 5883 7045.4 7943.9 5592.2 9213.6 12326 7381.4 8596.4 8957.2 4833.2 9233.3 8826.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5795200 762 1040 732 1383 1123 1123 1 9606 Homo sapiens -0.05536965294595575 AEQESGLYR Unmodified 1051.4934 0.49343786 4594 Q9NU22;Q6AI22 MDN1;DKFZp686H16106 Midasin yes no 0 0 0 2 0 1 36.022 36.078 2 0.00010078 8099 20230619_1881_Aki_TMTPro18x_K_F2 177.91 153.96 67094 47418 63458 69823 68152 68373 62609 64143 79260 88107 96346 87878 97117 75747 76436 75382 114040 95704 61959 43615 64854 68624 70253 69158 64003 66470 80532 87742 97988 88785 98089 78590 80143 76904 108620 90752 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48134000 763 4594 733 1384 1124 1124 1 9606 Homo sapiens -0.030249123214844076 AEQINQAAGEASAVLAK Unmodified 1669.8635 0.8635131 4673 Q9UJZ1;A0A087WYB4;Q9UJZ1-2;Q6ZNW0;F2Z2I8 STOML2 Stomatin-like protein 2, mitochondrial yes no 0 0 0 6.5 0.5 1 1 57.864 57.924 3 6.6226E-05 16987 20230619_1887_Aki_TMTPro18x_K_F7 93.152 81.237 67919 57035 60460 61317 80693 80446 55590 57833 126290 92703 122240 135800 84466 113960 39006 69025 56635 58173 62756 52255 62315 61829 81655 79436 59688 61589 124320 93257 123890 134980 85514 115630 41613 69465 54028 55363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 597430000 764 4673 734 1385;1386 1125 1125 1 9606 Homo sapiens 0.05537588767242596 AEQIVPLSAASFER Unmodified 1516.7886 0.78855725 3856 Q13535-2;Q13535-3;Q13535;A0A590UJ01 ATR Serine/threonine-protein kinase ATR yes no 0 0 0 6 0 1 57.318 57.39 2 0.071803 17052 20230619_1886_Aki_TMTPro18x_K_F6 72.29 30.891 23330 22096 23726 25188 24494 25867 24880 24508 29379 31989 28695 29871 37279 27040 21868 42332 34310 37680 21596 20247 24086 25198 25386 26086 25208 25334 29683 31862 29837 30341 37024 28813 23310 41965 32731 35825 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10237000 765 3856 735 1387 1126 1126 1 9606 Homo sapiens 0.05083451026621333 AEQLAAEAER Unmodified 1086.5306 0.53055165 4090 Q68CN2;Q71SV8;Q9HCS7 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 yes no 0 0 0 1 0 1 41.275 41.275 2 0.026948 10641 20230619_1880_Aki_TMTPro18x_K_F1 71.896 55.563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 766 4090 736 1388 1127 1127 1 9606 Homo sapiens -0.009252407757230685 AEQLAAEAERDQPLR Unmodified 1695.854 0.85401105 4090 Q68CN2;Q71SV8;Q9HCS7 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 yes no 0 0 1 2 0 1 47.196 47.271 3 0.0012784 13212 20230619_1881_Aki_TMTPro18x_K_F2 75.282 65.92 121180 127780 121880 126090 136490 134840 130090 143670 194830 156630 172050 140710 179240 156790 158210 160120 180130 168090 112260 116900 123970 127700 140440 136010 133560 146450 193800 157240 177660 144230 181760 161400 162460 161310 172050 159610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79872000 767 4090 737 1389 1128 1128 1 9606 Homo sapiens 0.033918204816927755 AEQLFSSALCAAR Unmodified 1422.6925 0.69254837 141 A0A024R1I3;Q96GD0 PDXP Pyridoxal phosphate phosphatase yes no 0 0 0 2 0 1 59.688 59.7 2 0.00013566 18502 20230619_1881_Aki_TMTPro18x_K_F2 145.08 120.22 118560 97276 127180 137080 106620 132360 125540 125660 123840 140620 128030 121090 122340 106860 146070 119640 122460 106780 109700 89375 128240 135070 112940 133990 125510 129260 126530 140680 130950 123290 126150 111360 146660 119410 117290 101610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46584000 768 141 738 1390 1129 1129 1 9606 Homo sapiens -0.0018902008507666324 AEQLGAEGNVDESQK Unmodified 1573.722 0.72199382 4568 Q9NQ29-3;Q9NQ29;A8MYV2;Q1W6G4;Q53G47;Q9NQ29-2;D3DU41;B8ZZ10;B8ZZ09 LUC7L Putative RNA-binding protein Luc7-like 1 yes no 0 0 0 1.5 0.5 1 1 42.68 42.72 3 1.1600000000000002E-25 11070 20230619_1881_Aki_TMTPro18x_K_F2 236.4 211.47 187550 135590 192160 203660 212150 241720 208670 211630 262240 253020 284290 276560 292460 236040 239400 209350 297890 262190 173340 124740 195190 200480 218810 240760 212310 219380 265000 254260 290870 278170 295630 243540 247400 213910 284210 248600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 352830000 769 4568 739 1391;1392 1130;1131 1131 2 9606 Homo sapiens -0.04191829325895924 AEQPHQHAMYYLR Oxidation (M) 1658.7624 0.76235927 1507 P14735;A0A7I2V610;A0A3B3ISG5;A0A7I2V2P6;A0A7I2V3E3;A0A7I2YQV5;Q59GA5;P14735-2;B3KSB8;B7Z7W6;A0A7I2V3K9;A0A7I2V4Q3;A0A7I2V2S1 IDE Insulin-degrading enzyme yes no 0 1 0 6.5 0.5 1 1 31.426 31.492 4 6.3064E-05 5904 20230619_1887_Aki_TMTPro18x_K_F7 115.34 96.019 18982 17080 18258 19104 25214 23675 25554 24159 31848 16573 19193 17776 14879 16230 24455 21601 21431 18989 17557 15650 18716 19194 25625 23617 25919 24445 31528 17222 20108 17964 15809 17054 24517 21485 20517 18072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40694000 770 1507 740 1393;1394 1132 1132 1005 1 9606 Homo sapiens -0.04067141416476261 AEQVALSR Acetyl (Protein N-term) 914.48214 0.48214489 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A8Q3WL93;A0A8Q3WLT0;A0A8Q3WL80;E7EM57;E9PD92;A0A8Q3WL90;A0A8Q3WLB9 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 1 0 0 1 0 1 40.379 40.379 2 6.1811E-07 10247 20230619_1880_Aki_TMTPro18x_K_F1 169.37 135.63 98779 62222 97671 88810 99451 93080 118110 105950 60765 100160 121330 121720 117130 85346 98059 76126 106080 56844 91198 57241 99276 87587 103360 94111 116300 107240 67685 102020 121470 121280 118620 88750 100350 75693 101070 54376 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234760000 771 1464 741 1395 1133 1133 1 9606 Homo sapiens 0.021483103750369992 AERENADIIR Unmodified 1185.6102 0.61019895 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q96T67;Q5T9A4;Q5T9A4-3;Q9H834;Q5T9A4-2 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B yes no 0 0 1 2.5 0.5 1 1 32.577 32.642 3 0.00011944 6722 20230619_1881_Aki_TMTPro18x_K_F2 126.33 87.973 74670 55771 61162 71988 99929 83566 84379 97117 112590 84790 96008 88724 100450 84367 77678 116340 119560 85783 68904 51210 63871 71522 100180 83990 86837 97886 112380 86512 99392 89866 101350 88810 81901 114580 113760 81925 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144530000 772 4603 742 1396;1397 1134 1134 1 9606 Homo sapiens 0.02481825898257739 AERPDVDEK Unmodified 1057.504 0.50400254 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 2.5 0.5 1 1 34.077 34.138 3 0.0010659 7292 20230619_1881_Aki_TMTPro18x_K_F2 103.22 66.98 74062 35631 100450 94746 138080 148570 102180 138670 118740 82692 144020 173760 116620 119350 143790 57027 150470 146540 68509 33156 100360 91423 139410 145780 105760 140740 120840 89333 145630 170220 121300 121580 145610 63626 143880 138250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103790000 773 3881 744 1398;1399 1135 1135 1 9606 Homo sapiens -0.022449296670629337 AERPEDLNLPNAVITR Acetyl (Protein N-term) 1848.9694 0.96937516 488 A0A024R829;Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 yes no 1 0 1 3 0 1 53.223 53.279 2 7.3565E-12 15608 20230619_1882_Aki_TMTPro18x_K_F3 105.13 79.917 56313 43837 60558 60171 48901 63472 59262 61472 79704 81142 82459 68920 86331 73498 61845 90279 82429 93783 52088 40272 60996 59464 52092 63854 59813 63449 80162 80602 84507 70742 86838 76578 64618 90556 78747 88996 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86860000 774 488 745 1400 1136 1136 1 9606 Homo sapiens 0.07884924612699251 AESCGSGNSTGYQIR Unmodified 1585.6791 0.67908315 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5;E7EWK3 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 0 0 4.5 0.5 1 1 36.201 36.27 2 5.481E-25 8036 20230619_1883_Aki_TMTPro18x_K_F4 284.12 276.01 31486 26562 33397 31070 31098 34172 33915 35430 37640 45794 48320 43834 44913 40648 34705 51927 54913 48212 29134 24355 33717 31065 32553 34356 34173 36373 38590 45650 48877 44505 45495 42617 36679 51741 52299 45856 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 70092000 775 4503 746 1401;1402 1137;1138 1137 2 9606 Homo sapiens -0.0903292265500113 AESCLDRR Unmodified 1005.4662 0.46617725 217 A0A024R2X2;Q92551-2;Q92551 IHPK1;IP6K1 Inositol hexakisphosphate kinase 1 yes no 0 0 1 3 0 1 27.577 27.698 3 0.070686 4804 20230619_1882_Aki_TMTPro18x_K_F3 38.962 18.442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 776 217 747 1403 1139 1139 1 9606 Homo sapiens -0.03633719133495106 AESDGSLLLESK Unmodified 1247.6245 0.62451161 4110 Q6IN85;G3V5A2;H0YIY8;G3V5Z3;A0A024R6M2;Q6IN85-5;Q6IN85-4;Q6IN85-2;G3V4R3;G3V231 SMEK1;KIAA2010 Serine/threonine-protein phosphatase 4 regulatory subunit 3A no no 0 0 0 3 0 1 52.76 52.819 2 6.059E-10 15419 20230619_1882_Aki_TMTPro18x_K_F3 224.58 175.21 50034 38724 40026 47244 43392 51902 49484 49148 50083 55613 58699 57719 63357 50788 54597 62563 61308 62571 46173 35532 41594 47066 45018 52059 49567 50575 51360 55909 60016 58279 64076 53256 56086 62659 58603 59426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27983000 777 4110 748 1404 1140 1140 1 9606 Homo sapiens 0.010604335358948447 AESDWDTVTVLR Acetyl (Protein N-term) 1432.6834 0.68342347 3287 O60869-2;O60869-3;O60869 EDF1 Endothelial differentiation-related factor 1 yes no 1 0 0 1 0 1 62.465 62.465 2 8.022900000000001E-24 19484 20230619_1880_Aki_TMTPro18x_K_F1 182.65 168.49 12189 12303 10664 10392 9495.2 10095 8964.1 11804 11688 13545 13873 16644 14816 13642 10544 16439 14266 17212 11275 11244 10937 10665 9947.6 10283 9169 11981 11852 13682 14184 16647 14898 14313 11036 16500 13634 16329 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 283540000 778 3287 749 1405 1141 1141 1 9606 Homo sapiens -0.01561090169752788 AESEEGPDVLR Unmodified 1200.5622 0.5622457 1375 B4DRA5;B4DJW8;A0A2R8YFH5;Q15437;Q5QPE1;B4DS04 SEC23B Protein transport protein Sec23B yes no 0 0 0 1 0 1 40.914 40.914 2 4.9669E-12 10482 20230619_1880_Aki_TMTPro18x_K_F1 206.43 155.09 103310 74390 94611 119720 103040 116400 138170 125800 152870 131890 125640 143360 141830 116880 113880 150570 148530 141980 95388 68495 97148 117050 107330 118100 137640 128090 153780 133340 131000 144080 142940 123220 118400 150190 141730 134970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192830000 779 1375 750 1406 1142 1142 1 9606 Homo sapiens -0.030012928124278915 AESEEMETSQAGSK Oxidation (M) 1498.6093 0.60933183 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B4DSE8 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 1 0 1 0 1 35.027 35.027 3 0.0038911 7990 20230619_1880_Aki_TMTPro18x_K_F1 67.964 56.272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 780 3544 751 1407 1143 1143 2204 1 9606 Homo sapiens -0.12002846114251042 AESEQEAYLRED Unmodified 1438.6212 0.62121715 694 A0A024RBT2;Q502X2;A0A0S2Z5U7;Q9NR28-2;Q9NR28;A0A0S2Z5P6;Q9NR28-3;K7X1S0 DIABLO Diablo homolog, mitochondrial yes no 0 0 1 1 0 1 41.382 41.382 2 1.9877E-09 10682 20230619_1880_Aki_TMTPro18x_K_F1 184.27 164.06 65320 46026 53234 72106 54638 65522 66281 62285 79003 80766 95571 99977 107660 85924 72168 99020 108820 106950 60255 42368 55227 70526 57041 66643 66546 64398 80419 81223 97783 100150 107790 89813 76176 99660 103750 101500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73160000 781 694 752 1408 1144 1144 1 9606 Homo sapiens -0.08054861308801264 AESGESGGPPGSQDSAAGAEGAGAPAAAASAEPK Acetyl (Protein N-term) 2951.3017 0.30168051 187 A0A024R258;B3KNI8;B3KNI2;Q9UMX0-2;Q9UMX0;Q9UMX0-3;Q9UMX0-4 UBQLN1 Ubiquilin-1 yes no 1 0 0 1 0 1 47.386 47.386 3 0.0024609 13306 20230619_1880_Aki_TMTPro18x_K_F1 42.241 35.366 14987 13206 15728 18639 13753 14162 14855 13503 19161 21605 20696 18867 20895 16337 18057 25805 22772 21509 13870 12130 15899 18310 14468 14649 15053 14071 19353 21316 21154 19205 21180 17439 18715 25514 21734 20480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51382000 782 187 753 1409 1145 1145 1 9606 Homo sapiens -0.09591826603264053 AESIIIR Acetyl (Protein N-term) 842.48617 0.48616764 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;I3L4U9 NPLOC4 Nuclear protein localization protein 4 homolog yes no 1 0 0 1.5 0.5 1 1 51.444 51.489 2 0.0017049 15076 20230619_1881_Aki_TMTPro18x_K_F2 121.68 80.763 3852.5 2932.8 2368.2 3879.5 2871.7 5042.8 4846.7 11274 4564.5 4458.4 4519.3 4606.7 6276.8 4313.8 5103.6 6175.4 4861.8 7114.9 3549.4 2693.4 2550.1 3859.8 3012.6 5142.7 4776.3 10878 4664.5 4861.5 4717 4670.3 6286.8 4564.8 5203.7 6223.7 4669.6 6739.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16662000 783 534 754 1410;1411 1146;1147 1147 2 9606 Homo sapiens 0.05862399868760804 AESLIGVYPEQGDCVISK Unmodified 1963.9561 0.95609286 1432 G8JLG1;A0A384MR33;Q14683;A0A6Q8PHC3 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 5 0.816 1 1 1 60.562 60.599 3 3.424E-14 18125 20230619_1885_Aki_TMTPro18x_K_F5 164.01 149.76 152500 125840 146590 159350 128840 141790 149670 163830 158030 178940 160510 153980 173760 140640 153430 190920 172230 176530 140980 115480 149200 157970 135790 145230 150060 166220 160770 179190 165110 157050 175920 148220 157630 190120 164630 167810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 258080000 784 1432 755 1412;1413;1414 1148;1149;1150 1149 3 9606 Homo sapiens 0.012673057184201753 AESLPLSSNLQSK Unmodified 1372.7198 0.71980898 1392 A0A2X0U2G7;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-5;Q8N1W1-2 ARHGEF28 Rho guanine nucleotide exchange factor 28 yes no 0 0 0 8 0 1 51.563 51.64 3 0.00084703 14227 20230619_1888_Aki_TMTPro18x_K_F8 96.746 81.48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 785 1392 756 1415 1151 1151 1 9606 Homo sapiens 0.04835786726948754 AESLQQEVEALK Unmodified 1343.6933 0.69325988 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;Q59F36 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 0 0 3.5 0.5 1 1 60.157 60.173 3 8.5294E-06 18369 20230619_1883_Aki_TMTPro18x_K_F4 136.93 113.71 109510 87140 111200 118760 101250 127410 122980 124820 130490 118890 134710 115170 128610 113660 125240 146270 127720 137360 101260 80041 112740 117430 106640 128060 123010 127540 132610 120390 137630 117190 131320 118990 127670 145900 122240 130520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68222000 786 1717 757 1416;1417 1152;1153 1153 2 9606 Homo sapiens 0.035160978356316264 AESLQVTR Unmodified 902.48214 0.48214489 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;A0A994J5C5;A0A994J5Y2;A0A994J7T3;Q96D47 NSF Vesicle-fusing ATPase yes no 0 0 0 5 0 1 37.586 37.679 2 0.0024847 8545 20230619_1885_Aki_TMTPro18x_K_F5 125.98 78.631 69538 43137 71059 84480 92013 98690 94239 94989 104100 77469 98636 112890 111370 95379 97846 64961 120620 110480 64214 39858 72462 82013 93946 98557 95178 96846 105180 80350 102110 112300 112630 97400 100790 68442 115120 104490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113230000 787 1435 758 1418 1154 1154 1 9606 Homo sapiens 0.0270031037505305 AESPEEVACR Unmodified 1146.4975 0.49753696 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;Q5H962;B4DGF6 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 1 0 1 35.352 35.352 2 3.7346E-05 8130 20230619_1880_Aki_TMTPro18x_K_F1 151.48 128.77 52698 35208 50044 50512 55385 61827 60311 63781 66419 60471 73875 76412 68857 67196 66726 58333 85550 78237 48653 32382 51146 49898 57249 61682 60730 64918 67576 61778 75246 76510 70407 69131 68874 59914 81621 74126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56820000 788 594 759 1419 1155 1155 1 9606 Homo sapiens -0.06985190890100057 AESQLLECK Unmodified 1076.5172 0.51720977 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 3.33 0.471 2 1 47.502 47.563 2 0.00031582 12892 20230619_1883_Aki_TMTPro18x_K_F4 140.16 89.286 50843 38801 46677 54215 51395 54823 51017 44390 57325 65600 72642 72125 74957 59848 62877 79969 85703 81186 46962 35656 47873 53461 53002 55155 51663 46677 58692 65356 73895 72524 75845 63220 65502 80050 81748 77115 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69560000 789 3440 760 1420;1421;1422 1156;1157 1157 2 9606 Homo sapiens -0.017988148793165237 AESSESFTMASSPAQR Acetyl (Protein N-term);Oxidation (M) 1742.7417 0.74174299 2702 B7Z8Z6;P49736;B3KXZ4;F8WDM3 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 1 1 0 1 0 1 41.998 41.998 2 2.9211E-11 10964 20230619_1880_Aki_TMTPro18x_K_F1 94.82 87.801 26946 20583 23885 31712 34631 32061 30515 34073 37904 33774 39856 40720 37897 29737 35119 36960 35405 38141 24883 18937 24719 31093 34981 32442 31239 34658 38263 34355 40716 40652 38586 31426 35788 37089 33891 36204 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37498000 790 2702 761 1423 1158 1158 1619 1 9606 Homo sapiens -0.09991821377434462 AESSESFTMASSPAQR Acetyl (Protein N-term) 1726.7468 0.74682837 2702 B7Z8Z6;P49736;B3KXZ4;F8WDM3 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 1 0 0 1 0 1 47.803 47.803 2 6.774700000000001E-20 13463 20230619_1880_Aki_TMTPro18x_K_F1 174.87 168.02 14524 6673.6 11878 13641 11508 14454 10965 12579 17707 17008 13951 15498 18541 17179 13021 18245 16807 16776 13373 6181.2 12290 13198 12004 14495 11301 13094 17521 16916 14694 15851 18530 17715 13575 18222 16044 15949 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48054000 791 2702 761 1424 1159 1159 1 9606 Homo sapiens -0.08747517514802894 AESSFSEEEEEK Unmodified 1399.5627 0.56269921 2845 H0Y9N4;D6RC04;D6RJ90;Q9Y6G5 COMMD10 COMM domain-containing protein 10 yes no 0 0 0 1 0 1 43.086 43.086 3 0.00014725 11464 20230619_1880_Aki_TMTPro18x_K_F1 84.884 71.222 42686 34297 58138 57406 69557 74135 58821 72509 83100 56965 98899 105480 79865 75199 84662 58428 96333 106220 39584 31582 57933 56267 71039 73620 60739 73746 83746 59902 99933 103810 82387 77684 86503 61747 92126 100350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33336000 792 2845 762 1425 1160 1160 1 9606 Homo sapiens -0.12109962673912378 AESTPEIAEQR Unmodified 1229.5888 0.58879481 2750 Q13098-7;Q13098;Q13098-5;C9JFE4;B4DND6;Q13098-6 GPS1 COP9 signalosome complex subunit 1 yes no 0 0 0 1.5 0.5 1 1 36.942 36.972 2 5.6053E-12 8757 20230619_1880_Aki_TMTPro18x_K_F1 204.86 182.78 172890 113160 155190 168270 188980 201800 180330 183690 228740 219950 238710 230460 272380 206200 184010 228500 282250 250740 159530 104140 159700 165770 193460 201060 183840 189850 230730 220710 245730 232660 272630 214850 194310 230390 268890 238030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 117140000 793 2750 763 1426;1427 1161;1162;1163 1162 3 9606 Homo sapiens -0.016816039211107636 AESVVLEHR Unmodified 1038.5458 0.54580778 714 E9PPA0;A0A024RCB5;B7Z705;B4DN31;Q9BWS9-3;Q9BWS9;E9PKF1;E9PI70;E9PIP0;E9PRL3;E9PPH0;Q9BWS9-2 CHID1 Chitinase domain-containing protein 1 yes no 0 0 0 2.5 0.5 1 1 36.316 36.373 3 7.1093E-09 8116 20230619_1882_Aki_TMTPro18x_K_F3 182.39 146.06 47611 36293 46717 46080 58053 53091 48542 50384 57842 59132 65510 79498 67915 60965 56176 71120 84103 78631 43999 33316 47677 45829 59077 53123 49806 51895 58734 59900 67039 79106 68731 64013 58949 71683 80161 74624 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95952000 794 714 764 1428;1429 1164 1164 1 9606 Homo sapiens 0.028076708121261618 AETECQNTEYQQLLDIK Unmodified 2081.9575 0.95754942 1272 P13645;CON__P13645;A0A1B0GVI3 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 3.5 0.5 1 1 59.699 59.715 3 3.0195E-18 18271 20230619_1882_Aki_TMTPro18x_K_F3 170.11 153.99 + 56908 58230 58803 93015 1212100 75696 114030 88417 133360 64031 77325 61701 75408 329820 89829 75224 65945 81367 52718 53542 75200 90759 1128400 81691 178900 88915 134020 66470 81853 71893 79506 316720 89699 80306 63433 77161 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 189720000 795 1272 765 1430;1431 1165;1166;1167 1165 3 9606 Homo sapiens -0.04015104983409401 AETEEGPDVLR Unmodified 1214.5779 0.57789577 2974 F5H365;Q15436;B4DSQ5;B4DF60;Q15436-2 SEC23A Protein transport protein Sec23A yes no 0 0 0 1 0 1 41.745 41.745 2 6.0721E-23 10867 20230619_1880_Aki_TMTPro18x_K_F1 253.32 219.15 176400 152870 152960 164290 197520 227090 235510 188310 253930 236250 224900 249190 276220 214800 185060 265810 283970 265200 162990 140040 158140 165830 202760 224010 235590 196420 256550 236680 234430 251140 275920 225500 195680 266020 270610 251960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 353940000 796 2974 766 1432 1168 1168 1 9606 Homo sapiens -0.020810062953842134 AETLEFNDVYQEVK Acetyl (Protein N-term) 1725.8097 0.8097462 315 A0A024R4Z6;Q08945 SSRP1 FACT complex subunit SSRP1 yes no 1 0 0 1.33 0.471 2 1 63.776 63.784 2 3.4139E-20 20030 20230619_1880_Aki_TMTPro18x_K_F1 147.95 125.86 103120 79778 109760 106070 91967 125950 114530 106910 114840 131170 124870 142410 154140 109020 128410 153840 146570 160120 95372 73268 110690 105210 97690 125340 114220 111210 117490 131570 129040 142890 155030 116030 132180 154140 140160 151970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 359350000 797 315 767 1433;1434;1435 1169;1170;1171;1172 1169 4 9606 Homo sapiens -0.024126284551357458 AETLPGSGDSGPGTASLGPGVAETGTR Acetyl (Protein N-term) 2483.1776 0.17758961 3876 Q14151;A0PJ47;Q14151-2 SAFB2 Scaffold attachment factor B2 yes no 1 0 0 2 0 1 55.512 55.533 3 2.6428E-21 16784 20230619_1881_Aki_TMTPro18x_K_F2 142.21 142.21 13394 12128 16760 18948 16230 20385 14465 18660 18249 17831 18550 21464 20567 19987 21458 20373 21120 24687 12419 11153 16750 18581 16871 20449 14825 19153 18397 18176 19132 21567 20985 20680 21780 20713 20235 23389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127370000 798 3876 768 1436 1173 1173 1 9606 Homo sapiens -0.004672078421663173 AETLSGLGDSGAAGAAALSSASSETGTR Acetyl (Protein N-term) 2536.1889 0.18888258 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z959;B7Z2H3;K7ES42 SAFB Scaffold attachment factor B1 yes no 1 0 0 4 0 1 61.636 61.639 3 2.4771E-05 19028 20230619_1883_Aki_TMTPro18x_K_F4 51.539 42.124 32733 32548 36375 31289 34736 40618 39395 38631 50740 23496 25913 22498 24814 20571 32881 26817 27439 32656 30336 29776 36598 31861 36359 40329 39788 39194 49961 24582 27703 22857 25749 21630 32962 27190 26342 30936 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45075000 799 2020 769 1437 1174 1174 1 9606 Homo sapiens -0.01776430538666318 AETLSGLGDSGAAGAAALSSASSETGTRR Acetyl (Protein N-term) 2692.29 0.28999361 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z959;B7Z2H3;K7ES42 SAFB Scaffold attachment factor B1 yes no 1 0 1 4.5 0.5 1 1 55.955 55.992 3 2.8575E-39 16252 20230619_1885_Aki_TMTPro18x_K_F5 155.73 148.62 26281 20844 23745 22807 24837 25458 24256 26640 31277 28493 27398 27609 31439 25410 29801 36242 31063 33363 24277 19104 24337 22922 25699 25582 24717 27172 31318 28675 28474 28012 31876 26861 30439 36064 29725 31711 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184630000 800 2020 770 1438;1439 1175 1175 1 9606 Homo sapiens 0.011540211640749476 AETPHGAEEECR Unmodified 1384.5677 0.56774179 1540 E7EMT0;B4E355;B4DYJ1;A0A494BZT8;Q9Y6A5 TACC3 Transforming acidic coiled-coil-containing protein 3 yes no 0 0 0 1 0 1 26.926 26.926 3 0.003038 4771 20230619_1880_Aki_TMTPro18x_K_F1 72.265 49.029 2124.4 0 1172.7 1697.2 2239.1 3810.5 1024.1 2464.1 2116.8 1314.7 3123 3214.5 3397.1 2467.1 2050.9 2293.6 3838.3 2996.8 1944.8 0 1290.3 1595.7 2225.2 3653 1141.2 2574.7 2130.4 1449.8 3166.5 3153.9 3392.6 2561.6 2208.5 2346.6 3649.4 2842 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6178700 801 1540 771 1440 1176 1176 1 9606 Homo sapiens -0.10915937292270428 AETYEGVYQCTAR Unmodified 1546.6722 0.67220686 1294 B7Z670;A0A1S5UZH4;Q14CA1;C9JYY6;Q92823-3;Q92823-4;Q92823-6;Q92823-2;Q92823;Q92823-5;C9JH43;Q4KMQ7;Q75ML9 NRCAM Neuronal cell adhesion molecule yes no 0 0 0 4 0 1 43.437 43.481 2 0.0010433 11059 20230619_1883_Aki_TMTPro18x_K_F4 115.33 100.06 14155 9026.1 10894 9265.8 7695.8 9877.5 13496 14494 16285 15603 15835 16915 20462 12910 14022 22987 17639 19489 13046 8276.1 11283 9362.3 8424.3 10047 13359 14508 16412 15742 16470 16991 20404 13996 14623 22711 16854 18541 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26833000 802 1294 772 1441 1177 1177 1 9606 Homo sapiens -0.07926235535569504 AEVAAEFLNDR Unmodified 1233.599 0.59896556 2301 J3JZZ9;B2RBP3;Q8TBC4;Q8TBC4-2;F8W8D4 UBE1C;UBA3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 3 0 1 55.978 56.014 2 7.5243E-07 16780 20230619_1882_Aki_TMTPro18x_K_F3 135.56 96.015 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 803 2301 773 1442 1178 1178 1 9606 Homo sapiens -0.008489961958730419 AEVDDVIQVR Unmodified 1142.5932 0.5931519 2794 CON__Q28107;A0A0A0MRJ7;P12259 F5 Coagulation factor V;Coagulation factor V heavy chain;Coagulation factor V light chain yes no 0 0 0 2 0 1 48.582 48.647 2 0.00035545 13821 20230619_1881_Aki_TMTPro18x_K_F2 147.2 112.1 + 82340 85146 94733 106130 145970 186100 127630 115920 206240 108320 134850 167380 122090 127350 160550 102090 127040 132190 76358 78066 96089 106410 147390 180420 132030 123090 202460 111960 141430 165700 126990 131220 160410 104910 121910 125220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57459000 804 2794 774 1443 1179 1179 1 9606 Homo sapiens 0.02755905292474381 AEVEAPTAAETDMK Acetyl (Protein N-term) 1503.6763 0.67628918 2248 B2R7T5 yes yes 1 0 0 1 0 1 52.36 52.36 2 2.0349E-05 15322 20230619_1880_Aki_TMTPro18x_K_F1 78.908 50.165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 805 2248 775 1444 1180 1180 1 9606 Homo sapiens -0.055401908325166005 AEVEETLK Acetyl (Protein N-term) 959.48114 0.48114184 4558 Q9NP97;A0A140VJH9;B4DFR2;Q8TF09;H3BNG9;H3BPA0;Q7Z4M1;Q9NP97-2 DYNLRB1;DYNLRB2 Dynein light chain roadblock-type 1;Dynein light chain roadblock-type 2 yes no 1 0 0 1.5 0.5 1 1 52.326 52.345 2 0.00068539 15307 20230619_1880_Aki_TMTPro18x_K_F1 92.925 77.843 219950 173810 182560 215120 188130 223980 210910 201980 247210 278140 277610 298630 288990 227620 247930 317860 304780 314170 203050 159500 188860 213920 195850 225300 212470 209960 251180 277570 284000 299760 292550 241970 256360 317530 291130 298410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 750770000 806 4558 776 1445;1446 1181 1181 1 9606 Homo sapiens -0.00021948784524283838 AEVLSEEPILK Unmodified 1226.6758 0.6758189 4151 Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;Q53FN7;Q7L1Q6-2;D3DN77 BZW1;hCG_2022736 Basic leucine zipper and W2 domain-containing protein 1 yes no 0 0 0 3.67 0.471 1 2 56.495 56.513 2;3 0.0002163 17024 20230619_1882_Aki_TMTPro18x_K_F3 153.24 87.939 118090 92848 112620 117360 114690 117220 122430 128010 149730 146620 131440 142450 155860 128730 115140 170920 149710 161490 109120 85220 114900 116530 119150 118820 123860 130500 150350 147050 136820 144340 156380 135490 120020 170380 142990 153440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 255480000 807 4151 777 1447;1448;1449 1182;1183 1182 2 9606 Homo sapiens 0.07154802300601659 AEVPGATGGDSPHLQPAEPPGEPR Unmodified 2365.1299 0.12985156 923 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;Q9P2K5-4 MYEF2 Myelin expression factor 2 yes no 0 0 0 3 0 1 43.407 43.477 3 2.6017E-26 11133 20230619_1882_Aki_TMTPro18x_K_F3 179.5 169.71 18030 14868 17533 21763 14338 15907 15444 16327 16725 21140 19128 22529 24794 18896 17440 24731 27320 30992 16669 13666 17825 21324 15178 16536 15563 16792 17093 21138 19776 22675 24771 19942 18449 25081 26070 29356 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42215000 808 923 778 1450 1184 1184 1 9606 Homo sapiens 0.0018918274831776216 AEVSELK Unmodified 774.41233 0.41233399 3746 P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72;K7EPB9;A0A8Q3SHK3;A0A590UJT6;Q2TAC2-2;Q2TAC2 TPM4;HEL-S-108;CCDC57 Tropomyosin alpha-4 chain;Coiled-coil domain-containing protein 57 yes no 0 0 0 3 0 1 43.955 44.025 2 0.024608 11390 20230619_1882_Aki_TMTPro18x_K_F3 98.997 7.3703 308800 186530 350710 364310 504180 603230 476910 549140 569220 318910 484710 539430 439660 383830 414770 242470 530790 546850 285390 172370 355300 356070 511170 589990 485280 558220 570210 341660 499670 531970 449140 393870 427610 263540 506840 516120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 375350000 809 3746 779 1451 1185 1185 1 9606 Homo sapiens 0.016104317064218776 AEVTMGDPHQQTLAR Oxidation (M) 1668.789 0.78896795 138 H7C441;C9JXG5;F8WCP5;A0A024R1D6;Q13769;H7C072 THOC5;hCG_2011153 THO complex subunit 5 homolog yes no 0 1 0 3.5 0.5 1 1 33.723 33.783 3 0.00040533 7098 20230619_1882_Aki_TMTPro18x_K_F3 85.178 71.977 17704 13440 19865 21526 26678 26727 22995 23747 23815 22131 32555 31442 26610 22476 27518 22830 29054 26576 16379 12372 20109 21127 27042 26558 23436 24424 24544 22732 32724 31195 27383 23496 28024 23166 27766 25211 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41838000 810 138 780 1452;1453 1186 1186 57 1 9606 Homo sapiens -0.018674973158113062 AEVVETTQVYTEEETRR Unmodified 2038.9807 0.98072771 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0;Q96IE3 PLEC;PLEC1 Plectin yes no 0 0 1 1.5 0.5 1 1 45.77 45.81 3 5.0598E-48 12527 20230619_1881_Aki_TMTPro18x_K_F2 270.74 229.78 34566 25610 30850 35997 35836 45837 50591 47326 52666 45273 56277 54889 55923 42659 48475 67787 57791 64653 31915 23539 31778 35616 37271 45604 50191 48190 53626 46158 57541 54935 56707 45746 50050 67472 55251 61416 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161260000 811 3921 781 1454;1455 1187 1187 1 9606 Homo sapiens 0.002796571255203162 AEWLLAVR Unmodified 956.54435 0.54435122 4586 Q9NRN7;Q9NRN7-2 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes no 0 0 0 1.5 0.5 1 1 60.202 60.207 2 0.0046954 18705 20230619_1881_Aki_TMTPro18x_K_F2 115.69 73.852 165050 145170 139260 119030 130750 173860 154000 152900 202780 51832 48539 41251 41066 42124 97137 53271 57212 38197 152490 132700 143390 123260 137490 171180 155330 154920 197150 57790 56803 42518 44917 43965 95335 52661 54995 36509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177970000 812 4586 782 1456;1457 1188 1188 1 9606 Homo sapiens 0.06434081514032641 AEWQVYKEEISR Unmodified 1536.7573 0.75725712 2871 Q6LES8;E5KSX8;E5KSU5;Q00059;H7BYN3;Q00059-2 TFAM Transcription factor A, mitochondrial yes no 0 0 1 6 0 1 53.079 53.157 3 0.00018795 15257 20230619_1886_Aki_TMTPro18x_K_F6 106.03 93.151 177230 170810 206010 183060 227900 216740 235410 221530 173530 212410 227950 121950 105490 79756 279540 64362 71582 41594 164290 156420 207040 184470 234630 216880 235100 225680 182520 212220 225580 126570 119450 82945 268530 64401 70291 39857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157370000 813 2871 783 1458 1189 1189 1 9606 Homo sapiens 0.010348779925607232 AEYDLTTR Acetyl (Protein N-term) 1009.4716 0.47163978 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;A0A7I2V3I2;H0YBP5;A0A7I2V4G3;E5RHS5;A0A161SXE1;A0A7I2V570;A0A7I2V3W9;E5RJ25;A0A7I2V2S9;E5RII3;E5RIP5 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 1 0 0 1 0 1 44.933 44.933 2 0.00033112 12239 20230619_1880_Aki_TMTPro18x_K_F1 155.51 146.74 31077 24641 32733 32231 34485 38674 33517 36002 38051 27650 25334 22780 28361 22462 30750 25263 34692 28813 28743 22624 33135 32011 35660 38549 34000 36729 37986 28264 26719 23349 28964 23351 31409 25558 33114 27351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217290000 814 1659 784 1459 1190 1190 1 9606 Homo sapiens -0.03271717070060731 AEYEGDGIPTVFVAVAGR Unmodified 1849.921 0.92102798 3489 P22234;P22234-2;E9PBS1;D6RF62 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 5.33 0.471 2 1 62.342 62.389 2;3 9.496999999999999E-52 19207 20230619_1886_Aki_TMTPro18x_K_F6 259.51 233.71 327520 245240 235130 312380 242470 334800 266070 284520 368810 259820 283670 328490 308440 299160 224450 380250 389890 415300 301980 225160 247170 310080 252890 335500 270070 293560 366160 266290 296300 329480 310530 313690 239710 382260 371620 393990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1670099999.9999998 815 3489 785 1460;1461;1462 1191;1192;1193 1193 3 9606 Homo sapiens 0.030064309727777072 AEYLASIFGTEK Acetyl (Protein N-term) 1369.6765 0.67654718 3777 Q01081;B5BU08;Q01081-2;Q8WU68-3;Q8WU68;A0A1B0GW87;M0QYK5;Q69YM7;M0R2N4;Q01081-3;Q8WU68-2;K7EJH3;K7EJM7 U2AF1;U2AF1L4;DKFZp313J1712 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit yes no 1 0 0 5 2 1 1 1 1 1 1 1 67.668 67.695 2 1.3627E-09 21397 20230619_1886_Aki_TMTPro18x_K_F6 103.26 84.524 445130 379090 406670 460160 400680 478020 484620 474260 476110 532370 522320 509910 587150 491230 510840 605810 533890 578090 411410 347690 416620 458290 419160 481890 483580 486370 487720 534130 536510 518220 593460 513440 522610 605120 510900 549200 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 2284500000 816 3777 786 1463;1464;1465;1466;1467;1468;1469 1194;1195;1196;1197;1198;1199;1200;1201 1198 8 9606 Homo sapiens 0.006495969496654652 AFADALEVIPMALSENSGMNPIQTMTEVR Oxidation (M) 3150.5036 0.5035569 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 1 0 6.67 0.471 1 2 66.56 66.59 3;4 1.4682E-09 20737 20230619_1887_Aki_TMTPro18x_K_F7 109.08 102.28 9098.9 8433.3 7394.1 8739 8319.6 8045 6629.3 6865.2 9169 9319.6 11017 9997.9 9439.4 7927.5 8476.7 9254 7743.1 11073 8407.4 7721.5 7670.8 8793.2 8524.1 8170.1 6866.2 7164.3 9271.1 9308.5 11137 10050 9633.9 8319.4 8602.2 9377.3 7438.6 10486 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42412000 817 2633 787 1470;1471;1472 1202;1203 1202 1581 2 9606 Homo sapiens 0.014325262327020027 AFADALEVIPMALSENSGMNPIQTMTEVR Unmodified 3134.5086 0.50864228 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 7 0 2 67.801 67.822 3;4 1.1112E-09 21258 20230619_1887_Aki_TMTPro18x_K_F7 114.21 102.13 2259.7 0 2283 2076.5 1562.9 996.21 1451.7 1503 1717.6 2142.2 2259.3 2691.3 2604.2 1132.4 1781 2113.9 2859.1 3214.9 2076.6 0 2303.2 1905.8 1562 1098.6 1477.4 1518.8 1724.5 2112.8 2309.4 2651.8 2601.2 1199.1 1799.4 2168 2727.6 3040.5 2 0 2 1 1 1 1 1 1 1 2 2 2 1 1 2 2 2 6680400 818 2633 787 1473;1474 1204;1205 1205 2 9606 Homo sapiens 0.026768300952880963 AFADAMEVIPSTLAENAGLNPISTVTELR Oxidation (M) 3045.5329 0.53286642 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 1 0 7 0 1 64.948 64.975 3 4.1230999999999997E-50 20083 20230619_1887_Aki_TMTPro18x_K_F7 229.77 217.71 24036 16455 16326 26105 24834 20178 22423 23290 21939 22916 24942 27043 26868 20956 24806 27227 26204 28913 22144 15151 17403 25468 25015 20935 22734 23582 22512 23292 25551 27060 27249 22158 25352 27346 25077 27434 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102750000 819 3622 788 1475 1206;1207 1206 2307 2 9606 Homo sapiens 0.09192129844859664 AFADAMEVIPSTLAENAGLNPISTVTELR Unmodified 3029.538 0.53795179 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 7.5 0.5 2 2 66.869 66.89 3;4 2.5275999999999997E-21 20869 20230619_1887_Aki_TMTPro18x_K_F7 165.87 155.47 8703.2 4071 6122.3 4544.3 4022.6 5273.3 5035.3 6345.2 5516.1 5099.9 8011.6 6675.8 7046.4 5347.1 6139.2 7366.2 8566.3 7424.1 8006.4 3736.6 6391.9 4552.9 4313.3 5299.8 4999.8 6370.2 5683.2 5160.3 8049.4 6672.5 7176 5559.8 6399 7369 8164.8 7055 3 2 3 2 2 3 2 3 3 2 3 3 3 2 3 3 3 3 101950000 820 3622 788 1476;1477;1478;1479 1208;1209;1210 1208 3 9606 Homo sapiens 0.10436433707491233 AFADPEVLRR Unmodified 1172.6302 0.63020611 4207;3056 Q8IWZ3-6;Q8IWZ3-4;Q8IWZ3;E9PDP5;Q8TEF1;Q8IWZ3-2;Q8IWZ3-5;H0YM23;O75179-6;O75179-7;O75179-2;O75179;B4DTP3;O75179-3;O75179-4;O75179-5 ANKHD1;FLJ00246;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 1 7 0 1 44.039 44.121 3 0.00020621 10962 20230619_1887_Aki_TMTPro18x_K_F7 119.68 78.178 39743 32265 36747 37946 44508 38441 39098 40727 50211 39585 39580 36796 42063 35887 35658 52084 46390 41573 36725 29589 37683 37875 45413 38923 40082 41415 50087 40005 41192 37497 42567 37891 37054 51441 44249 39615 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12975000 821 4207;3056 789 1480 1211 1211 1 9606 Homo sapiens 0.05079621628897257 AFAETHIK Unmodified 915.48142 0.48141661 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJA1;A0A804HKK7;A0A804HKX6 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 7 0.816 1 1 1 41.14 41.193 3 0.00054346 10034 20230619_1886_Aki_TMTPro18x_K_F6 134.91 89.598 470880 353300 433090 435180 475000 491600 518220 485660 578000 486710 590090 598960 591200 515800 553170 649250 642560 592490 434900 324250 443720 433590 491080 492780 521810 496730 585520 495400 605000 600460 601720 541600 568620 646880 613580 563530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1515199999.9999998 822 1723 790 1481;1482;1483 1212;1213;1214 1212 3 9606 Homo sapiens 0.02029515725996589 AFAHITGGGLLENIPR Unmodified 1664.8998 0.89983903 3488 Q3B7A7;Q59HH3;P22102;B4DJ93 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 3 0 1 56.916 56.949 3 8.3503E-43 17182 20230619_1882_Aki_TMTPro18x_K_F3 280.62 262.54 58682 54243 63812 60574 55324 63690 57656 57140 57424 64536 64163 67525 66835 56996 64791 69939 67225 75549 54345 49698 64243 60722 58196 64033 58039 59040 58833 64900 65667 68047 68028 59834 66085 70372 64354 71667 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25179000 823 3488 791 1484 1215 1215 1 9606 Homo sapiens 0.09398510454616371 AFALEVIK Unmodified 889.5273 0.52730417 4504;1998 A8K0P2;Q9H2U2-6;Q9H2U2-3;Q9H2U2-4;Q9H2U2;Q9H2U2-2 PPA2 Inorganic pyrophosphatase 2, mitochondrial no no 0 0 0 1 0 1 60.174 60.174 3 0.0094821 18588 20230619_1880_Aki_TMTPro18x_K_F1 76.899 31.587 14763 15574 16481 16855 16366 17181 15480 16053 21644 10670 10050 6568 8619.2 8871.5 16978 9989.6 9062 7488.7 13689 14259 16596 16928 16984 17331 15849 16336 21205 10974 10787 6951.1 9248.3 9127.8 16641 9905.4 8736.1 7145.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8019900 824 1998;4504 792 1485 1216 1216 1 9606 Homo sapiens 0.0781216090823591 AFALNDLDDYEK Unmodified 1412.646 0.64597533 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 3 0 1 60.893 60.922 2 3.8013E-13 18788 20230619_1882_Aki_TMTPro18x_K_F3 213.16 157.61 28652 27392 27775 29832 29152 32338 26782 29935 30691 36910 41264 44089 38258 35326 39332 45647 42055 48485 26515 25088 28316 29969 30117 32467 27291 30930 31492 37130 41732 44136 39210 37261 40165 45843 40256 45998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17853000 825 307 793 1486 1217 1217 1 9606 Homo sapiens -0.04384181435375467 AFAMIIDK Unmodified 907.48372 0.48372479 3930;3929 Q15365;Q53SS8;Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DRD7;B4DLC0;F8W0G4;F8VXH9;F8W1G6;H3BND9 PCBP1;PCBP2 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 no no 0 0 0 1.5 0.5 1 1 61.25 61.256 2 0.0027356 18969 20230619_1880_Aki_TMTPro18x_K_F1 121.99 89.858 145550 108910 118570 128800 98061 164140 132540 136440 202520 156710 129290 167840 215610 195250 131580 281550 246410 326650 134310 99918 122520 128890 105060 162520 133750 141820 199420 157840 140040 170960 213600 205110 142470 283520 235210 309480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239150000 826 3929;3930 794 1487;1488 1218 1218 1 9606 Homo sapiens 0.026282281394401252 AFAMIIDK Oxidation (M) 923.47864 0.47863942 3930;3929 Q15365;Q53SS8;Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DRD7;B4DLC0;F8W0G4;F8VXH9;F8W1G6;H3BND9 PCBP1;PCBP2 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 no no 0 1 0 8 0 1 56.288 56.345 2 0.012775 16288 20230619_1888_Aki_TMTPro18x_K_F8 91.9 55.199 127150 95931 97737 124130 116340 138130 120530 133050 180290 118510 104390 146590 161080 151470 114950 227240 210550 275400 117290 88085 102180 123180 119750 138450 123080 135870 177170 121570 113390 147820 160690 160100 123620 229400 200980 260830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116120000 827 3929;3930 794 1489 1219 1219 2600 1 9606 Homo sapiens 0.013839242768312943 AFAVGVQQVLLK Unmodified 1271.7602 0.76015765 3354 O95373 IPO7 Importin-7 yes yes 0 0 0 4.5 0.5 1 1 62.382 62.408 3 6.5766E-05 18980 20230619_1885_Aki_TMTPro18x_K_F5 117.67 83.787 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 828 3354 795 1490;1491 1220;1221 1221 2 9606 Homo sapiens 0.13514797908010223 AFCAENLEEK Unmodified 1209.5336 0.53358811 2004 P49407;P49407-2;A8K103;E9PM35 ARRB1 Beta-arrestin-1 yes no 0 0 0 2.8 0.748 2 2 1 49.914 49.974 2;3 0.00021795 14101 20230619_1882_Aki_TMTPro18x_K_F3 161.44 130.22 306950 258740 291190 289970 249580 262040 297510 294550 334990 392020 395290 380520 449590 350060 342400 472200 472600 435150 283760 237140 296440 290100 263770 268010 298510 301310 341850 390490 404890 385970 451920 368680 357940 470080 450670 413840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 444220000 829 2004 796 1492;1493;1494;1495;1496 1222;1223;1224 1224 3 9606 Homo sapiens -0.06279733713222413 AFCAGGDIR Unmodified 965.4389 0.43889987 1183 A0A140VJL0;Q6NVY1;Q6NVY1-2;B8ZZZ0 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 41.218 41.308 2 0.008837 10056 20230619_1885_Aki_TMTPro18x_K_F5 107.19 82.189 142540 98638 135830 146800 190830 189490 187970 206860 198470 155620 180700 198730 178250 148380 170860 162800 209040 182920 131630 90747 139430 144820 193610 188730 190010 208660 200760 161310 186270 198040 181680 155490 175920 164540 199460 173620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175550000 830 1183 797 1497;1498 1225 1225 1 9606 Homo sapiens -0.045202026738934364 AFDIIER Unmodified 862.45487 0.45486751 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2;H3BRD9;H3BV15 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 3.5 0.5 1 1 51.757 51.784 2 0.024527 14900 20230619_1882_Aki_TMTPro18x_K_F3 89.296 52.321 121020 87934 112780 140140 121340 137970 140270 144230 154070 150030 135940 142690 159850 116990 141230 170540 156640 164480 111770 80952 115560 137110 125920 139740 140750 147070 155520 151060 141430 144340 161400 124460 144950 170070 149770 156260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146990000 831 4222 798 1499;1500 1226;1227 1226 2 9606 Homo sapiens 0.018138268346547193 AFDLFNPNFK Unmodified 1211.5975 0.597509 3144 J3QLR8;Q9Y3D9 MRPS23 28S ribosomal protein S23, mitochondrial yes no 0 0 0 2 0 1 63.05 63.059 3 0.00057052 20004 20230619_1881_Aki_TMTPro18x_K_F2 98.249 63.025 75541 63467 82056 78921 69066 91388 81322 86964 92285 94107 89304 90380 97775 80955 89098 114920 94135 117770 69912 58228 82616 78612 73206 91323 81674 89311 93316 94605 92149 91646 99100 85641 91187 115010 90183 111750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84340000 832 3144 799 1501 1228 1228 1 9606 Homo sapiens 0.00017414506010027253 AFDLIVDRPVTLVR Unmodified 1612.9301 0.93007653 2102 H3BPJ9;A8K761;O96000;O96000-2;Q96RX5;H3BV16 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes no 0 0 1 2 0 1 60.204 60.216 3 1.4028E-08 18707 20230619_1881_Aki_TMTPro18x_K_F2 153.94 125.83 133300 108180 128680 147110 147740 170380 167670 156730 170080 134440 149720 162640 158400 147150 160840 154390 142870 172880 123220 99355 131530 145610 152520 170150 167930 160520 172210 137990 155100 163300 161570 152630 162490 156100 137080 163900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 432000000 833 2102 800 1502 1229 1229 1 9606 Homo sapiens 0.14812869119759853 AFDLVPPEAVPEQK Unmodified 1538.7981 0.7980593 4351 Q96G03;B4DN40;Q96G03-2 PGM2 Phosphoglucomutase-2 yes no 0 0 0 5 0 1 60.649 60.699 3 0.018339 18206 20230619_1885_Aki_TMTPro18x_K_F5 58.885 30.253 32228 27866 31637 37550 33439 43036 35348 40395 45447 29673 29944 31388 35773 31111 35828 37008 36956 46455 29806 25585 32258 37182 34708 43013 35846 41153 45068 30648 31726 31798 36343 32429 36503 37614 35415 43988 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65659000 834 4351 801 1503 1230 1230 1 9606 Homo sapiens 0.05021219312152425 AFDMINR Unmodified 865.41162 0.41162248 606;2430 H7C0X5;O75225;A0A024RA40;Q9H3G5;H7C218;B3KW79 CPVL Probable serine carboxypeptidase CPVL no no 0 0 0 7 0 1 48.032 48.12 2 0.046001 12715 20230619_1887_Aki_TMTPro18x_K_F7 88.029 58.691 105660 83109 109830 123330 146320 179580 146600 146400 159130 138480 142380 156150 153530 137380 132040 144290 169680 168370 97707 76417 111900 121880 149230 176450 148150 151610 160730 140970 147450 157030 155410 142700 136780 146210 161980 159670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63544000 835 606;2430 802 1504 1231 1231 1 9606 Homo sapiens -0.026466862142683567 AFDQGADAIYDHINEGK Unmodified 1862.8435 0.84350594 4658 Q9UDW1 UQCR10 Cytochrome b-c1 complex subunit 9 yes yes 0 0 0 4.5 1.12 1 1 1 1 55.655 55.703 3 1.4539E-23 16657 20230619_1882_Aki_TMTPro18x_K_F3 165.9 145.16 121280 101710 140480 145670 142690 165730 171850 159890 177010 146400 154190 173320 187080 149300 159450 175320 195890 210630 112310 93461 141210 143720 148790 165850 171700 163430 179060 149550 160850 173900 188560 156270 164720 177680 187170 199630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 536650000 836 4658 803 1505;1506;1507;1508 1232;1233 1232 2 9606 Homo sapiens -0.05340206963364835 AFDSGIIPMEFVNK Unmodified 1566.7752 0.77521537 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 7.67 0.471 1 2 63.568 63.594 2;3 3.0711E-17 19344 20230619_1888_Aki_TMTPro18x_K_F8 171.49 151.65 1894700 1632400 2015300 1797600 1089700 1588800 1613500 1443300 1511900 2412900 2065400 2142100 2571200 1872700 1778100 2416200 2625000 2443100 1753500 1495700 2022100 1800300 1221400 1619200 1595200 1511400 1572500 2376700 2115000 2176700 2568900 1971300 1872100 2418800 2502200 2320900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4206599999.9999995 837 161 804 1509;1510;1511 1234;1235 1234 2 9606 Homo sapiens 0.014498769230385733 AFDSGQNLSPDR Unmodified 1305.5949 0.59494282 3210 O00418 EEF2K Eukaryotic elongation factor 2 kinase yes yes 0 0 0 3.5 0.5 1 1 42.537 42.603 2 5.5892E-05 10748 20230619_1882_Aki_TMTPro18x_K_F3 128.88 112.16 24557 21348 23462 21436 22529 24738 24140 23838 27666 26166 37745 33134 34436 31951 25289 31188 40803 37807 22708 19546 23897 21705 23523 24757 24371 24480 28359 26539 38058 33306 34843 32951 26763 31708 38869 35850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14463000 838 3210 805 1512;1513 1236;1237 1236 2 9606 Homo sapiens -0.04563085689574109 AFDTAGNGYCR Unmodified 1230.5088 0.50877035 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 5.5 0.5 1 1 40.702 40.792 2 2.9877E-17 9850 20230619_1885_Aki_TMTPro18x_K_F5 272.66 237.04 158130 118610 142120 137660 124880 154070 135780 138730 163880 194010 210910 195810 200280 169600 170580 230060 212840 196840 146020 108790 145410 137720 131590 154200 137250 144250 167330 193120 213560 197920 203340 178960 176640 228180 203120 187370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138470000 839 3606 806 1514;1515 1238;1239 1238 2 9606 Homo sapiens -0.09726368795941198 AFEDEKK Unmodified 865.41815 0.41814765 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 1 4 0.816 1 1 1 39.97 40.033 3 0.093344 9627 20230619_1883_Aki_TMTPro18x_K_F4 44.447 0.63923 99244 44270 136500 130350 232460 174070 168210 216590 128530 96355 195060 208680 119930 136150 242840 74984 179850 168410 91792 41309 136860 125040 231250 173660 172290 214960 135610 107080 194060 204220 130750 139480 240360 82135 172610 159000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140670000 840 654 807 1516;1517;1518 1240 1240 1 9606 Homo sapiens -0.01994469781902808 AFEDEMKK Unmodified 996.45863 0.45863226 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;Q75MG1;E7EMS9;E9PFE3;B7Z6N5;C9JF98;F8WDX8;Q9Y6E2-2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 1 4.5 0.5 1 1 45.122 45.183 3 0.039769 11710 20230619_1885_Aki_TMTPro18x_K_F5 60.91 44.708 103870 70904 82642 89622 99739 109800 101620 110450 147160 128280 138460 142290 155600 120140 112940 141690 153970 130300 95788 65117 86016 89238 102440 109500 103760 113220 146960 129150 143170 143060 156190 125820 118010 141340 146750 123970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191340000 841 607 808 1519;1520 1241 1241 1 9606 Homo sapiens -0.0397387145378616 AFEDEMSGR Oxidation (M) 1056.4182 0.418224 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 1 0 1 0 1 35.688 35.688 2 0.0078441 8243 20230619_1880_Aki_TMTPro18x_K_F1 84.615 53.386 96318 66805 82659 87103 121550 125950 116040 119000 150700 113940 130620 143980 137440 108060 119020 133370 150100 141800 88873 61368 85718 86795 123050 124250 118340 121870 150650 116390 135320 143570 139170 114010 123140 134050 143250 134620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181570000 842 2337;3778;3779 809 1521 1242 1242 1443 1 9606 Homo sapiens -0.10772837844206151 AFEDEMSGR Unmodified 1040.4233 0.42330938 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 43.261 43.301 2 4.7796E-08 11523 20230619_1880_Aki_TMTPro18x_K_F1 199.8 156.56 233690 172560 208750 232970 234970 286880 279310 277250 339690 285080 310870 320830 332880 275210 299050 350180 395450 346980 215760 158530 214750 230950 243520 285640 280830 284080 341300 288890 321330 322630 337520 289360 310260 350370 377090 329770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253240000 843 2337;3778;3779 809 1522;1523 1243;1244 1243 2 9606 Homo sapiens -0.0952853398159732 AFEEAEK Unmodified 822.37595 0.37594848 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1;A0A7P0TAY0 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 0 1.5 0.5 1 1 42.671 42.711 2 0.005639 11068 20230619_1881_Aki_TMTPro18x_K_F2 139.28 90.776 290040 163400 374180 380600 629280 734980 459130 545050 516150 314780 505520 639660 466560 463530 512280 201290 597990 615650 268320 151500 377040 370530 629040 711240 474740 563410 521450 340680 518520 627790 480080 470180 523060 230750 571440 580290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 260300000 844 3656 810 1524;1525 1245 1245 1 9606 Homo sapiens -0.04234445190286351 AFEGQAHGADR Unmodified 1157.5214 0.52138394 2691 Q59F54;B7Z5A7;B7Z966;B7Z5J8;Q8TDB8-3;Q8TDB8-4;P11169;Q8TDB8-2;Q8TDB8;Q8TDB8-5 SLC2A14;SLC2A3 Solute carrier family 2, facilitated glucose transporter member 14;Solute carrier family 2, facilitated glucose transporter member 3 yes no 0 0 0 2 0 1 29.252 29.324 3 3.8275E-05 5481 20230619_1881_Aki_TMTPro18x_K_F2 147.63 126.73 15930 9634 18306 17382 26306 22572 22935 20606 28839 21422 28805 25855 26403 27809 25701 18543 28389 24056 14725 8891.7 18507 16975 26550 22390 23494 21213 29013 21768 29430 26111 27026 28112 26253 19124 27106 22806 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8706600 845 2691 811 1526 1246 1246 1 9606 Homo sapiens -0.05107589341400853 AFELMHSGK Unmodified 1018.4906 0.49060109 3436 Q6IRT1;Q6FI45;P11766;Q5U043 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 yes no 0 0 0 7.5 0.5 1 1 46.29 46.353 3 3.0981E-05 12020 20230619_1888_Aki_TMTPro18x_K_F8 154.05 107.45 245130 195550 219050 214750 284590 357310 262340 241370 384050 286610 306430 301710 341970 287760 301490 326650 326530 310880 226430 179240 225700 217150 290470 347770 269410 255760 381040 288110 319520 305200 345990 299330 308800 326710 312080 295500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 654340000 846 3436 812 1527;1528 1247;1248 1248 2 9606 Homo sapiens -0.017904589799854875 AFENCSEDLQER Unmodified 1496.6202 0.62017129 3317 V9HW40;Q53F60;O75828 HEL-S-25;CBR3 Carbonyl reductase [NADPH] 3 yes no 0 0 0 1 0 1 42.94 42.94 2 2.1349E-17 11399 20230619_1880_Aki_TMTPro18x_K_F1 265 252.39 50566 37009 44060 56593 67217 69085 80305 77501 78348 69799 72126 72655 82360 65341 67023 84979 81808 74040 46676 34051 45744 55676 68280 69081 80093 78371 79668 71039 74745 73423 82988 68683 69335 84420 78077 70468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85294000 847 3317 813 1529 1249 1249 1 9606 Homo sapiens -0.10827398949345479 AFEPEARPEER Unmodified 1329.6313 0.63132832 1392 A0A2X0U2G7;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 ARHGEF28 Rho guanine nucleotide exchange factor 28 yes no 0 0 1 1.5 0.5 1 1 35.332 35.36 3 0.00038954 8128 20230619_1880_Aki_TMTPro18x_K_F1 103.75 73.313 67054 52420 65600 74617 82317 87838 74967 67219 83241 82499 99212 97447 92822 85009 83550 92631 110080 106400 61974 48177 67059 73652 83968 87340 76271 70546 84966 83040 100740 97835 94557 88488 86634 93711 105040 100920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105430000 848 1392 814 1530;1531 1250;1251 1250 2 9606 Homo sapiens -0.020302087928712353 AFFESHPAPSAER Unmodified 1444.6735 0.67352749 2933 P55786;E9PLK3;B7Z899;B7Z4B2;P55786-2;B7Z1H4;B7Z1V9;H0YDG0 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 5 0.816 1 1 1 40.758 40.848 3 5.261899999999999E-19 9902 20230619_1883_Aki_TMTPro18x_K_F4 199.27 157.93 125470 106920 133830 133430 128950 133420 135480 165290 144260 122540 153460 163130 155230 132880 172580 144460 178700 180860 116110 98095 135160 132640 134400 135650 136640 165450 146730 127310 157230 162770 159200 138700 175360 147110 170930 171380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 351460000 849 2933 815 1532;1533;1534 1252;1253 1252 2 9606 Homo sapiens -0.031022333844930472 AFFPCFDTPAVK Unmodified 1398.6642 0.66420836 4514 Q9H4A4;A6NKB8;Q7RU04;A0A087WU27;C9JMZ3;A0A087WUS4 RNPEP Aminopeptidase B yes no 0 0 0 2.5 0.5 1 1 62.479 62.498 3 5.8931E-05 19742 20230619_1881_Aki_TMTPro18x_K_F2 116.55 94.915 330960 299270 313880 323000 250520 298400 309290 307730 314150 380370 353280 376760 425740 342330 394670 403770 412730 462590 306100 274130 319380 324100 266970 303920 308790 315750 321740 380260 364040 381360 430580 357740 402930 408010 395070 438560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 395360000 850 4514 816 1535;1536 1254 1254 1 9606 Homo sapiens -0.01917717994388113 AFFSEVER Unmodified 983.47125 0.47124585 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2;F8VR77 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 4 0.816 1 1 1 51.087 51.138 2 0.00012857 14459 20230619_1883_Aki_TMTPro18x_K_F4 176.41 128.67 2457500 1987400 2071300 2252100 2127200 2306100 2323000 2375900 2614000 2565900 2556800 2315200 2759200 2274200 2267900 2745700 2601600 2527000 2269300 1822000 2138000 2254100 2211300 2330200 2340400 2427300 2644900 2575600 2632800 2361700 2786000 2372600 2335800 2738100 2485500 2402700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2004299999.9999998 851 654 817 1537;1538;1539 1255;1256;1257 1256 3 9606 Homo sapiens -0.02115091999235119 AFFSEVERR Unmodified 1139.5724 0.57235688 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2;F8VR77 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 1 7 0 1 44.935 45.021 3 1.9105E-23 11323 20230619_1887_Aki_TMTPro18x_K_F7 213.98 176.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 852 654 818 1540 1258 1258 1 9606 Homo sapiens 0.008153597034606719 AFGFSHLEALLDDSK Unmodified 1648.8097 0.80968662 4350 Q96FW1;F5H6Q1;B4DPD5;F5GYN4;F5GYJ8 OTUB1 Ubiquitin thioesterase OTUB1 yes no 0 0 0 7 0 1 62.706 62.741 3 3.9696E-14 19053 20230619_1887_Aki_TMTPro18x_K_F7 180.97 150.53 1338100 907200 1269800 1263800 991880 1313100 1193900 1110100 1201800 1504100 1457000 1515100 1536400 1354200 1543100 1645100 1458200 1759800 1235500 834060 1291500 1247400 1059400 1318700 1193100 1159200 1235500 1498900 1487100 1531900 1565900 1417600 1565000 1654600 1398100 1669100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2270100000 853 4350 819 1541 1259 1259 1 9606 Homo sapiens 0.011234163355084092 AFGGQSLK Unmodified 806.42865 0.42865276 21 A0A024QZ30;P31040;P31040-2;D6RFM5;Q0QF12;B4DYN5;A0A494C1T6;B7Z668 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 1.5 0.5 1 1 45.681 45.722 2 0.0069758 12466 20230619_1881_Aki_TMTPro18x_K_F2 117.04 69.293 248260 236660 226630 231450 322910 377110 304190 266380 423740 185840 214760 214150 222780 179090 227700 237320 265290 228330 229630 216560 233550 236120 327720 367780 311130 277680 415810 193610 230550 215130 227450 188980 233560 237020 253210 217100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160920000 854 21 820 1542;1543 1260 1260 1 9606 Homo sapiens 0.01769557663192245 AFGHHAVSLLDGGLR Unmodified 1548.8161 0.8161094 1209 A0A140VJX3;P25325;P25325-2;Q2VEU1;B1AH49;Q59HD5 MPST 3-mercaptopyruvate sulfurtransferase;Sulfurtransferase yes no 0 0 0 2 0 1 46.484 46.563 4 1.1197E-05 12872 20230619_1881_Aki_TMTPro18x_K_F2 115.34 92.701 37040 27859 52916 53706 54271 73625 51794 64639 55708 64907 68646 84514 62829 78924 70678 64561 71700 89916 34354 25713 52474 52323 56263 72642 52556 66618 57093 66162 69700 84634 64848 80746 71761 66561 68718 85067 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237080000 855 1209 821 1544 1261 1261 1 9606 Homo sapiens 0.06365399077549228 AFGIPIR Unmodified 772.45956 0.45955895 56 A0A024QZP7;Q5H9N4;P06493;I6L9I5;E5RIU6 CDC2;DKFZp686L20222;CDK1 Cyclin-dependent kinase 1 yes no 0 0 0 3.5 0.5 1 1 51.786 51.833 2 0.018756 14963 20230619_1882_Aki_TMTPro18x_K_F3 106.84 25.165 838140 690410 787320 794220 766380 913280 838430 868800 947790 780580 729720 573380 746250 655560 778770 852480 731150 607860 774650 632990 803800 795360 800380 913380 844740 888040 950410 787780 758850 595280 762850 683660 789090 839720 699170 580400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 504000000 856 56 822 1545;1546 1262;1263 1262 2 9606 Homo sapiens 0.06422755768085153 AFGLVGK Unmodified 690.40646 0.40646075 112 A8K6H9;A0A024R0W3;Q96QD8-2;Q96QD8 SLC38A2 Sodium-coupled neutral amino acid transporter 2 yes no 0 0 0 3 0 1 52.552 52.611 2 0.016485 15333 20230619_1882_Aki_TMTPro18x_K_F3 109.88 109.88 236340 207210 251750 235970 195410 220780 194980 213790 259770 250180 248610 215870 277570 196940 191390 298560 280860 222350 218760 189920 253450 235870 207550 224330 198860 219860 260600 249880 256510 220310 278100 209240 201650 293800 267460 212210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156400000 857 112 823 1547 1264 1264 1 9606 Homo sapiens 0.048873779854261556 AFGPGLEGGLVNK Unmodified 1257.6717 0.67173657 3886 Q14315;Q14315-2 FLNC Filamin-C yes no 0 0 0 8 0 1 56.672 56.729 3 0.0016247 16482 20230619_1888_Aki_TMTPro18x_K_F8 77.124 53.374 79047 64964 86555 77485 61467 79283 87729 79143 93940 93932 92472 93521 114720 87344 92137 104020 98798 110350 73152 59582 86888 77290 66596 80016 87144 81288 95313 94135 95919 94755 115230 91250 94523 104580 94545 104700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39557000 858 3886 824 1548 1265 1265 1 9606 Homo sapiens 0.05320757597564807 AFGPGLQGGSAGSPAR Unmodified 1428.711 0.71097563 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9 FLNA Filamin-A yes no 0 0 0 1.5 0.5 1 1 43.66 43.701 2 1.0252000000000001E-25 11724 20230619_1880_Aki_TMTPro18x_K_F1 237.87 178.86 181990 149090 160510 179130 251320 279730 245060 233420 287440 195110 225380 197270 209060 175510 236590 206480 222490 210260 168120 136750 166360 179700 253810 274130 248580 240570 287650 199530 233340 199600 215190 183420 239140 207320 212930 199710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 833650000 859 3484 825 1549;1550 1266;1267 1266 2 9606 Homo sapiens 0.01376857881155047 AFGSGIDIKPGTPPIAGR Unmodified 1752.9523 0.95226853 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8YET2;A0A2R8Y7F4;A0A2R8Y424 PRRC2C Protein PRRC2C yes no 0 0 1 3 0 1 53.515 53.567 3 1.4424E-09 15728 20230619_1882_Aki_TMTPro18x_K_F3 135.09 95.869 125820 90670 124460 121240 114640 121710 134170 133510 140900 140090 136020 119370 136020 96760 136750 139550 129310 129770 116250 83300 126370 119960 120330 123300 134400 135740 143000 140560 139710 121430 138720 102920 138650 138990 123800 123360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 501680000 860 2894 826 1551 1268 1268 1 9606 Homo sapiens 0.10591048797550684 AFGSGYR Unmodified 756.35549 0.35548781 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;F8VX11;F8VP89 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 0 3.67 3.09 1 1 1 37.516 37.531 2 0.0051171 9004 20230619_1880_Aki_TMTPro18x_K_F1 143.37 128.95 443920 326300 381630 414500 422340 510140 454260 445390 606710 443350 465170 459820 469110 373110 405750 505720 544160 470650 409740 299590 393730 412520 437090 506950 460720 459430 603300 449060 483960 463290 475710 394800 421860 503810 518800 447670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 385620000 861 2578 827 1552;1553;1554 1269;1270 1269 2 9606 Homo sapiens -0.03243571059419992 AFGYYGPLR Unmodified 1042.5236 0.52361577 2236 B2R6F3;P84103-2;P84103;A0A087X2D0 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 yes no 0 0 0 4 0 1 53.273 53.292 2 0.0004919 15509 20230619_1883_Aki_TMTPro18x_K_F4 152.26 114.65 145860 154800 45481 52349 732860 3542500 218170 120730 3366400 35266 0 28542 54729 43072 28464 45721 40114 47273 134360 140870 68351 102980 722740 3230700 342050 355220 3101200 52263 46780 29255 50973 44124 30116 45938 38318 44857 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 398120000 862 2236 828 1555 1271 1271 1 9606 Homo sapiens 0.004054911343473577 AFHNEAQVNPER Unmodified 1410.664 0.66402543 3470 P17987;E7EQR6;F5H282 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 3 0.816 1 1 1 33.284 33.345 3 4.5644E-18 6854 20230619_1882_Aki_TMTPro18x_K_F3 229.97 194.42 104300 48808 110470 117320 133810 143270 121900 127050 156370 132320 166510 190800 166530 142250 152090 129910 184980 181600 96231 45332 112090 113050 136830 142410 124700 131070 157660 135260 170510 189240 169300 147720 156590 133730 176650 171950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2003599999.9999998 863 3470 829 1556;1557;1558 1272;1273;1274 1273 3 9606 Homo sapiens -0.02488001670030826 AFHNEAQVNPERK Unmodified 1538.759 0.75898845 3470 P17987;E7EQR6;F5H282 TCP1 T-complex protein 1 subunit alpha yes no 0 0 1 6 0.816 1 1 1 34.558 34.628 4 3.6815E-08 7170 20230619_1887_Aki_TMTPro18x_K_F7 163.33 130.34 213730 110740 179220 198780 241380 216320 222720 219710 237930 230320 257360 234550 263480 212990 216110 289460 269570 221660 196910 102280 185920 193610 244990 217490 226120 224510 242340 232330 263200 237430 266430 224390 223940 285660 257080 211420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2114999999.9999998 864 3470 830 1559;1560;1561 1275;1276;1277 1277 3 9606 Homo sapiens 0.011159318011550567 AFHPDLEFVGK Unmodified 1258.6346 0.63462279 3363 O95864-3;O95864;O95864-4;O95864-2 FADS2 Fatty acid desaturase 2 yes no 0 0 0 6.5 0.5 1 1 54.382 54.452 3 3.8633E-09 15510 20230619_1887_Aki_TMTPro18x_K_F7 152.7 112.91 275480 168090 267270 272480 178230 207880 234630 232770 257130 321540 265260 194410 336230 221530 189690 444790 297740 248270 254260 154900 270850 265680 193800 215560 234200 238500 261440 316250 274210 204670 333620 239530 202850 431560 283490 238070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 406690000 865 3363 831 1562;1563 1278;1279 1279 2 9606 Homo sapiens 0.01565086051778053 AFHPFIAGPYNR Unmodified 1388.699 0.69895438 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;B4DKR8;H7C0A4;Q5HYC5 HDLBP;DKFZp686L08115 Vigilin yes no 0 0 0 5 0 1 48.778 48.854 3 4.5101E-06 13237 20230619_1885_Aki_TMTPro18x_K_F5 113.93 68.047 60824 50864 50843 55259 54180 57855 62748 56071 64406 46036 47164 43346 46867 42763 55449 57008 55141 51335 56173 46607 52557 55499 56242 58288 62796 57166 64775 47021 49195 44161 48283 44866 56224 56739 52735 48832 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102390000 866 292 832 1564 1280 1280 1 9606 Homo sapiens 0.020152859286099556 AFIDQGK Unmodified 777.4021 0.40210366 4173 Q7Z4Y4;Q9UIJ7;Q7Z531 AK3 GTP:AMP phosphotransferase AK3, mitochondrial yes no 0 0 0 6.5 0.5 1 1 45.754 45.841 2 0.05047 12055 20230619_1886_Aki_TMTPro18x_K_F6 89.298 35.141 319810 247740 332090 342780 433940 493100 479550 440140 509900 383610 484780 529750 490590 425040 478740 384610 556310 540660 295720 227620 338060 340220 443900 485810 481570 451840 516200 395390 499220 527380 500070 439860 490740 396230 531420 511920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 151420000 867 4173 833 1565;1566 1281;1282 1281 2 9606 Homo sapiens 0.004498687718637484 AFIITGQTYTR Unmodified 1269.6717 0.67173657 914 P30566;A0A7P0T9A7;A0A7P0Z472;A0A096LNY6;X5D8S6;A0A1B0GTJ7;A0A1B0GWJ0;B4DP46;A0A0A6YY92;Q71UA4;A0A7P0T8E4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;X5D2Z4;X5DP48;P30566-2;A8K4X6;A0A096LP92;B4DUM2;A0A096LPA2 ADSL Adenylosuccinate lyase yes no 0 0 0 4 0 1 52.286 52.309 2 0.0064845 15049 20230619_1883_Aki_TMTPro18x_K_F4 82.749 37.032 110020 113950 126330 129780 123220 143970 130970 146380 152470 139700 145960 132160 142590 106760 160980 148230 149430 149670 102030 104390 126960 130000 128480 144560 132350 149140 153830 141300 149880 133740 146400 113240 162660 148410 143080 142140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164710000 868 914 834 1567 1283 1283 1 9606 Homo sapiens 0.04768757597548756 AFIPAIDSFGFETDLR Unmodified 1797.8938 0.8937506 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 6.5 0.5 1 1 64.924 64.96 2 2.4747E-05 20102 20230619_1887_Aki_TMTPro18x_K_F7 108.56 91.538 10937 10863 12083 12436 13070 15047 12443 12224 14558 14055 13977 16485 17880 13476 14848 17261 17419 17003 10135 9952.4 12196 12464 13485 14954 12651 12734 14696 14183 14555 16518 17971 14206 15306 17263 16639 16153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141690000 869 2436 835 1568;1569 1284 1284 1 9606 Homo sapiens 0.026719474323954273 AFITNIPFDVK Unmodified 1263.6863 0.68632401 3631 P52272-2;P52272;A0A087X0X3;M0R019;M0R2T0;B4DEG4;M0R0N3;M0QYQ7;M0R0Y6 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 2.5 0.5 1 1 63.031 63.051 3 0.00017148 19956 20230619_1881_Aki_TMTPro18x_K_F2 113.69 88.301 840040 675570 810650 821110 822110 947380 865970 917040 1025300 947010 953190 912960 1039500 887950 931910 1095400 981700 1085700 776450 619770 826180 819090 854780 947640 875800 939480 1032700 954670 984860 928030 1053100 927810 953230 1096400 939520 1030900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2785100000 870 3631 836 1570;1571 1285;1286 1285 2 9606 Homo sapiens 0.0650282974570473 AFLADPSAFVAAAPVAAATTAAPAAAAAPAK Unmodified 2751.4596 0.45956554 691 P05388;A8K4Z4;A0A024RBS2;P05388-2;Q53HW2;Q53HK9;F8VWS0;Q6NSF2;B4E3D5;Q3MHV2;F8W1K8 RPLP0 60S acidic ribosomal protein P0 yes no 0 0 0 3 0 1 63.935 63.966 3 8.096000000000001E-31 20079 20230619_1882_Aki_TMTPro18x_K_F3 189.2 167.6 107790 82494 112480 131380 91065 129780 117370 119100 146110 152850 141660 143990 155690 141630 133090 171930 165360 169550 99663 75927 113700 128540 97248 130980 117740 123330 147110 152420 146170 146500 157480 147750 137730 172040 157930 161050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 504090000 871 691 837 1572 1287 1287 1 9606 Homo sapiens 0.15389413975253774 AFLASGPYLTHQQK Acetyl (Protein N-term) 1601.8202 0.82019173 1518 A0A3B3IT57;A0A7I2V620;E9PH64;B7Z7N1;E7EWZ0;E9PF49;Q9Y6M9;A0A7I2YQN0;Q5JVG7 NDUFB9;DKFZp566O173 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes no 1 0 0 1.5 0.5 1 1 57.463 57.47 2 2.2259E-06 17482 20230619_1880_Aki_TMTPro18x_K_F1 83.397 64.302 30758 27039 30627 38205 32089 34493 36001 38031 34454 36234 36752 35101 34357 32878 32114 36828 36461 37716 28454 24838 31191 37602 33300 35235 36037 38564 35291 36668 37487 35619 35061 34185 32962 36984 34852 35809 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59952000 872 1518 838 1573;1574 1288;1289 1288 2 9606 Homo sapiens 0.04335443780610149 AFLDALQNQAEASSK Unmodified 1591.7842 0.78420015 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 7 0 1 61.37 61.409 2 0.0081325 18398 20230619_1887_Aki_TMTPro18x_K_F7 92.151 76.395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 873 1211 839 1575 1290 1290 1 9606 Homo sapiens 0.011979418130977137 AFLIEEQK Unmodified 976.52295 0.52294707 1905 P49207;A1LUY1;Q5MK14 RPL34 60S ribosomal protein L34 yes no 0 0 0 5 0.816 1 1 1 53.562 53.607 2 2.4519E-05 15451 20230619_1886_Aki_TMTPro18x_K_F6 133.55 81.761 685750 598110 669230 681260 700230 754570 837400 758900 720970 773050 755080 670290 836670 663210 743970 756130 670780 648800 634230 548200 681830 682400 727940 757750 832700 775490 742890 777250 776260 685200 846360 689450 754170 752460 642350 617450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2206400000 874 1905 840 1576;1577;1578 1291;1292;1293 1293 3 9606 Homo sapiens 0.03374651694673503 AFLLESLLK Unmodified 1032.6219 0.62193284 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 3 0 1 64.988 65.02 2 4.8608E-05 20541 20230619_1882_Aki_TMTPro18x_K_F3 163.99 52.925 70369 54547 68440 69295 51749 68680 69737 67624 84708 67868 62367 62672 68602 64491 61064 79014 80479 82949 65032 50071 69452 68769 55670 69440 69738 69183 84515 68466 65315 63949 69540 67222 63398 79330 76831 78734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43633000 875 4372 841 1579 1294 1294 1 9606 Homo sapiens 0.10692674659571821 AFLLFPTIER Unmodified 1205.6808 0.6808447 2669 B5MDU6;Q9H6V9;Q9H6V9-2;C9JHU6;C9JUM0;B5MCU4;B4DS38;A0A0A0MSH6;Q9H6V9-4;Q9H6V9-3 LDAH;C2orf43 UPF0554 protein C2orf43 yes no 0 0 0 3.5 0.5 1 1 63.813 63.833 2 1.4391E-05 19938 20230619_1883_Aki_TMTPro18x_K_F4 190.73 155.92 201860 174770 201130 199650 176440 203900 200450 189290 211860 214100 224110 226340 215690 193680 248650 230590 227940 244640 186720 160200 203990 199710 185930 205560 201150 195130 215700 215410 229110 228110 222000 202790 251030 231980 218400 232150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 230790000 876 2669 842 1580;1581 1295;1296 1296 2 9606 Homo sapiens 0.08623150953894765 AFLPLLK Unmodified 800.51601 0.5160112 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 0 5.5 0.5 1 1 62.634 62.683 2 0.012912 19146 20230619_1885_Aki_TMTPro18x_K_F5 114.67 56.006 220860 304580 409190 217430 559740 378730 429350 516840 353380 238180 265900 225640 234370 175930 456380 234750 253530 230540 206540 277840 400830 229840 563290 374780 438460 510340 360700 255070 275860 228370 250430 186350 447740 235440 244380 219100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136700000 877 1532 843 1582;1583 1297 1297 1 9606 Homo sapiens 0.10777383604749957 AFLQGGQEATDIALLLR Unmodified 1814.989 0.98904797 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;O95654 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 0 0 8 0 1 64.435 64.456 3 6.5038E-30 19693 20230619_1888_Aki_TMTPro18x_K_F8 220.27 198.35 28163 24819 25285 31954 27190 31113 28930 29963 28757 29645 32379 32347 33683 30683 31615 37715 34096 39631 26032 22775 25994 31661 28149 31495 29075 30690 29459 30057 33112 32678 34252 32071 32358 37874 32637 37601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141810000 878 1717 844 1584 1298 1298 1 9606 Homo sapiens 0.11415300623502844 AFLTLAEDILR Unmodified 1260.7078 0.70778773 3687 P61026;Q53T70 RAB10 Ras-related protein Rab-10 yes no 0 0 0 8 0 1 66.464 66.483 2 6.1598E-09 20534 20230619_1888_Aki_TMTPro18x_K_F8 187.64 141.22 35382 23747 28714 30202 26024 30640 31591 28919 30073 32425 35569 36401 32744 29790 38625 36515 32903 35505 32629 21812 29693 29976 27416 30907 31490 29773 30946 32695 36136 36550 33791 31289 38848 36540 31554 33724 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46334000 879 3687 845 1585 1299 1299 1 9606 Homo sapiens 0.08786214774409018 AFMTADLPNELIELLEK Oxidation (M) 1962.002 0.00198042 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;A0A087WX41;P53675-2;P53675 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 1 0 6.25 0.829 1 1 2 67.127 67.16 3;4 2.3854E-09 20969 20230619_1887_Aki_TMTPro18x_K_F7 129.29 101 30394 27643 28639 34160 34828 28152 28826 31247 30321 37658 42657 36837 35130 31656 35333 44455 33269 40420 28111 25352 29346 33884 35447 29029 29486 31884 31325 37667 42817 37294 36103 33488 35868 44213 31901 38407 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 51345000 880 826 846 1586;1587;1588;1589 1300;1301;1302;1303 1301 484 4 9606 Homo sapiens 0.05945950900695607 AFMTADLPNELIELLEK Unmodified 1946.0071 0.0070657979 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;A0A087WX41;P53675-2;P53675 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 0 7 0 1 68.067 68.087 3 1.7467E-13 21346 20230619_1887_Aki_TMTPro18x_K_F7 153.94 119.26 13220 9220.2 8439.7 9490.4 5942.8 11086 11403 10384 9049.1 12885 9375 13304 10955 7758.9 10206 15274 11274 10990 12177 8450.7 8947.2 9587.3 6557.3 11066 11106 10726 9385.1 12886 9703.3 13287 11086 8582.5 10479 14973 10774 10484 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11151000 881 826 846 1590 1304 1304 1 9606 Homo sapiens 0.07190254763304438 AFMVTDEDIR Unmodified 1195.5543 0.55432356 2349 B3KMA8;K7EIE8;O95983-2;O95983 MBD3 Methyl-CpG-binding domain protein 3 yes no 0 0 0 2.5 0.5 1 1 52.312 52.364 2 0.001153 15491 20230619_1881_Aki_TMTPro18x_K_F2 111.61 90.1 310230 265910 312390 323000 305780 391440 345200 342290 402260 334350 317870 283160 329900 266930 349240 336170 339350 330660 286970 243880 317200 322400 319670 389360 347530 352820 403090 336960 330500 289400 337170 279680 354160 336450 324720 314150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 66061000 882 2349 847 1591;1592 1305;1306;1307 1305 3 9606 Homo sapiens -0.03563143333553853 AFNDPFIQK Unmodified 1078.5447 0.54474515 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;A0A0A0MSM0;B4DZB4;R4GN69 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 8 0 1 57.017 57.068 2 5.8326E-06 16598 20230619_1888_Aki_TMTPro18x_K_F8 182.29 108.16 193610 160170 174050 202470 156990 198280 192680 189840 207760 232690 188060 184430 242740 169120 179310 261540 198730 199360 178890 146980 178380 200910 165610 200570 192700 195690 210280 231360 196210 188980 242750 179970 184980 257610 189960 190010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 307660000 883 769 848 1593 1308 1308 1 9606 Homo sapiens 0.00861456443226416 AFNSNYEQR Unmodified 1127.4996 0.49958587 1686 A0A7P0TA34;A0A7P0T7Z2;Q9Y6D5;B3KMT7;Q59FR3;B4DYN7 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes no 0 0 0 5 0 1 37.509 37.601 2 0.0408 8531 20230619_1885_Aki_TMTPro18x_K_F5 66.692 57.478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 884 1686 849 1594 1309 1309 1 9606 Homo sapiens -0.05906394089947753 AFNSSGVGPYSK Unmodified 1212.5775 0.57750184 2992 F8W8C1;Q6ZTA4;Q6ZTA4-2 TRIM67 Tripartite motif-containing protein 67 yes no 0 0 0 2 0 1 47.764 47.835 2 2.085E-05 13451 20230619_1881_Aki_TMTPro18x_K_F2 162.68 126.13 45014 29591 43305 41366 33762 43474 44640 45642 53636 61299 66366 70385 67231 65322 69761 79710 83551 86681 41559 27210 43985 40840 36179 43827 44684 46894 54659 61378 67571 70881 68780 68279 71710 80227 79829 82245 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31229000 885 2992 850 1595 1310 1310 1 9606 Homo sapiens -0.020283812245679655 AFPEHLYQR Unmodified 1159.5774 0.57744226 3880;2441 B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 no no 0 0 0 7.5 0.5 1 1 41.654 41.688 3 7.3585E-09 9926 20230619_1887_Aki_TMTPro18x_K_F7 208.37 159.95 351410 299890 328570 325070 239040 288270 270020 257110 322490 278030 310370 306490 294300 278290 305200 343500 332410 312480 324850 274760 334260 325900 256560 293690 272290 265610 324890 280870 318330 309040 301630 291230 311870 342310 317640 297190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 643070000 886 2441;3880 851 1596;1597 1311;1312 1311 2 9606 Homo sapiens 0.004036635660895627 AFPLQCIHIAEGHTK Unmodified 1720.8719 0.87190972 4170;3047 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;H0YHT2;Q68D13;H0YI78 KIF21A;DKFZp779C159 Kinesin-like protein KIF21A no no 0 0 0 1.5 0.5 1 1 49.383 49.413 4 3.7039E-42 14083 20230619_1880_Aki_TMTPro18x_K_F1 281.07 256.22 268820 206320 222140 263180 208290 220170 195620 185810 206260 230850 238230 273140 269170 214530 220170 273210 296620 293820 248120 189410 229490 260470 217170 225190 198450 193630 211010 232120 244480 273280 271380 226400 229250 274590 283040 278860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 460460000 887 4170;3047 852 1598;1599 1313;1314 1313 2 9606 Homo sapiens 0.04030864202832163 AFPMPGFDEH Oxidation (M) 1162.4753 0.47534495 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 1 0 3 0.816 1 1 1 50.544 50.597 2 0.0054646 14349 20230619_1882_Aki_TMTPro18x_K_F3 85.265 83.324 144620 105300 140510 152920 149540 161950 150540 155310 177560 178920 198820 194170 195440 162960 186270 209920 210230 218710 133600 96824 143280 150580 154660 162900 152630 159760 180230 180010 202810 195430 199120 171640 191030 210610 200970 207610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 178210000 888 657 853 1600;1601;1602 1315 1315 402 1 9606 Homo sapiens -0.099393705678267 AFPMPGFDEH Unmodified 1146.4804 0.48043033 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 4 0.816 1 1 1 58.834 58.863 2 1.62E-13 17799 20230619_1883_Aki_TMTPro18x_K_F4 224.39 220.19 162170 144460 147850 161610 157270 185130 185020 188650 217820 203670 198650 221430 227030 193790 222730 229820 235220 266100 149930 132370 151640 162160 163520 185510 185940 192860 219300 205590 206160 222990 230630 202780 227290 232370 225150 252240 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 444240000 889 657 853 1603;1604;1605 1316;1317;1318 1317 3 9606 Homo sapiens -0.08695066705195131 AFPNPYADYNK Unmodified 1298.5932 0.5931519 277 Q6FHH6;Q53TN2;B2R602;A0A024R3Z5;O43813;E9PHS0;F8WDS9;B4DGM7 LANCL1 LanC-like protein 1 yes no 0 0 0 4.5 3.5 1 1 53.595 53.595 2;3 2.7369E-11 15127 20230619_1888_Aki_TMTPro18x_K_F8 170.47 141.55 51681 42041 47583 47457 42276 51735 48864 47231 55264 48683 49438 55806 56112 52949 60024 57642 58508 57940 47755 38539 48600 47554 44565 51887 49095 48616 55697 49362 51357 56222 57280 54932 60869 57882 55991 55031 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50955000 890 277 854 1606;1607 1319;1320 1320 2 9606 Homo sapiens -0.044200947075296426 AFQEGIAK Unmodified 862.45487 0.45486751 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 0 6 0 1 46.224 46.308 3 0.018384 12263 20230619_1886_Aki_TMTPro18x_K_F6 75.696 24.817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 891 4666 855 1608 1321 1321 1 9606 Homo sapiens 0.018138268346547193 AFQYADGLEQLR Unmodified 1409.6939 0.69392858 4439 Q9BU89 DOHH Deoxyhypusine hydroxylase yes yes 0 0 0 6 0 1 57.11 57.182 2 9.3321E-18 16941 20230619_1886_Aki_TMTPro18x_K_F6 191.53 150.02 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 892 4439 856 1609 1322 1322 1 9606 Homo sapiens 0.0054693727531685 AFQYVETHGEVCPANWTPDSPTIKPSPAASK Unmodified 3384.6085 0.60849098 1441 A0A384MTR2;P30048-2;P30048 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes no 0 0 1 4.5 3.5 1 1 56.508 56.537 5 7.0207E-10 16387 20230619_1888_Aki_TMTPro18x_K_F8 103.85 102.18 143760 150300 196530 222050 172230 207470 222460 223970 181300 248210 229010 190750 207550 150810 253680 168470 151490 155330 133560 138060 195090 218080 182000 211160 220230 228310 189210 247570 231670 194850 214340 157980 251040 168590 145960 147660 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 767780000 893 1441 857 1610;1611 1323;1324;1325;1326 1324 4 9606 Homo sapiens 0.011571070250738558 AFREEAIK Unmodified 962.51853 0.5185304 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 1 5.5 1.12 1 1 1 1 40.475 40.548 3 0.00078532 9708 20230619_1886_Aki_TMTPro18x_K_F6 132.9 35.468 1336000 1055500 1099700 1169800 1500000 1449200 1427400 1443000 1699900 1379300 1500300 1370500 1512200 1241300 1349500 1651300 1516400 1273300 1233300 967500 1143000 1176100 1523800 1444900 1451500 1472500 1707600 1397700 1548300 1388700 1535200 1306000 1385900 1630900 1447600 1214200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4073599999.9999995 894 3444 858 1612;1613;1614;1615 1327;1328;1329 1328 3 9606 Homo sapiens 0.03577187271741877 AFSDPFVEAEK Unmodified 1238.5819 0.58191851 3544 P34932;B4DH02;V9HW33;Q59GF8;O14992;Q7KYN0;P34932-2 HSPA4;HEL-S-5a;HS24/p52;HS24/P52 Heat shock 70 kDa protein 4 yes no 0 0 0 3.83 1.07 1 1 2 2 58.437 58.464 2;3 2.1872E-06 17676 20230619_1883_Aki_TMTPro18x_K_F4 152.54 126.01 237600 210540 230990 254120 212890 258180 259530 251880 279010 319040 304410 302220 333780 277010 296410 379360 316280 343660 219760 193070 235110 253120 223990 260600 259630 259590 284390 318260 312400 306830 337900 291990 303640 377320 302610 326690 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 859300000 895 3544 859 1616;1617;1618;1619;1620;1621 1330;1331;1332 1331 3 9606 Homo sapiens -0.027829168016751282 AFSEVPDRAPDSRPEEALDSSR Unmodified 2430.1411 0.14114453 3978 Q4V9L6;B4DVR7;B4DHW0 TMEM119 Transmembrane protein 119 yes no 0 0 2 3.5 0.5 1 1 43.833 43.889 4 3.8948E-23 11319 20230619_1882_Aki_TMTPro18x_K_F3 179.5 166.07 105100 95834 110050 97648 63098 61371 88220 93643 88616 130250 115950 108480 138460 112540 106550 135750 134440 117900 97289 87738 110570 98131 69832 65654 87641 94420 91547 128910 118590 111270 139050 117210 110600 134970 128250 112230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133440000 896 3978 860 1622;1623 1333 1333 1 9606 Homo sapiens -0.01672039948289239 AFSGYLGTDQSK Unmodified 1272.5986 0.59863121 1178 X6RA14;U3KQT1;A0A140VJJ2;P10768;H7BZT7 ESD S-formylglutathione hydrolase yes no 0 0 0 8 0 1 52.057 52.134 2 1.3831E-12 14457 20230619_1888_Aki_TMTPro18x_K_F8 230.41 170.39 128030 103440 114950 127240 97346 119330 113140 107870 120200 147200 162240 177850 164640 148340 151810 174530 181300 198970 118280 94907 117670 126430 103060 121000 113460 112120 123820 147540 164690 178110 167420 155360 156350 176260 173300 188660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108930000 897 1178 861 1624 1334 1334 1 9606 Homo sapiens -0.026764159157210088 AFSPTTVNTGR Unmodified 1149.5778 0.57783619 1833 P61619;A0A8V8TMZ5;B4DR61;B3KNF6;C9JXC6;A0A8V8TMZ3;P61619-3;A0A8V8TN19;A0A8V8TN25;A0A8V8TNG8 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 yes no 0 0 0 5 3 1 1 41.504 41.541 2 5.0247E-09 10497 20230619_1881_Aki_TMTPro18x_K_F2 188.87 116.08 402860 292740 342330 405120 482340 507700 532520 484870 556010 452580 526080 572290 559270 457530 469410 531670 622170 604680 371790 269030 355360 401060 491140 505000 534400 496170 563550 462900 542900 571630 565520 479760 487650 536990 593690 573620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 363440000 898 1833 862 1625;1626 1335;1336 1335 2 9606 Homo sapiens 0.009030384952893655 AFSQFGK Unmodified 783.39154 0.39153897 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2YQV8;B7Z213;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 2.5 0.5 2 2 49.598 49.667 2;3 0.011968 13954 20230619_1882_Aki_TMTPro18x_K_F3 89.673 68.127 1439300 1199400 1441000 1440400 1483600 1666900 1536100 1433700 1784700 1465000 1724200 1674800 1688700 1422500 1510200 1961900 1892900 1718600 1331100 1100100 1464300 1437900 1539600 1663200 1553600 1482200 1800400 1486100 1769800 1683500 1716600 1503700 1562400 1948000 1806200 1635600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2127699999.9999998 899 1680;2265 863 1627;1628;1629;1630 1337;1338 1338 2 9606 Homo sapiens -0.008821138825624075 AFSQFVRPLIAAK Unmodified 1446.8347 0.83471958 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3;Q05CG6;F5H6N4 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 1 8 0 1 60.516 60.548 3 6.5062E-08 18005 20230619_1888_Aki_TMTPro18x_K_F8 158.02 121.49 259640 286130 240240 208800 265590 300140 286510 269500 337190 23251 15394 16577 18548 11373 63610 20007 17171 13846 240450 261190 245880 218850 274580 296110 288950 270870 326780 37085 31219 17172 21074 12377 61083 19762 16855 13228 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58793000 900 1005 864 1631 1339 1339 1 9606 Homo sapiens 0.1291756071943837 AFSSPQEEEEAGFTGR Unmodified 1740.7591 0.75910761 618 A0A024RAC6;Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes no 0 0 0 1 0 1 48.165 48.165 2 1.1464E-18 13628 20230619_1880_Aki_TMTPro18x_K_F1 198.74 173.61 19154 17212 18335 15529 18796 23241 20774 21288 23353 24995 22212 19365 27429 20879 21159 24122 19379 23267 17716 15743 18687 15943 19563 22877 20914 21964 23622 24894 23048 19973 27508 21677 21546 24133 18586 22094 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21728000 901 618 865 1632 1340 1340 1 9606 Homo sapiens -0.08164157780151982 AFSVFLFNTENK Unmodified 1415.7085 0.70851601 3872 Q13907;A0A8Q3WKR8;Q13907-2;C9JD53 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 yes no 0 0 0 3 0 1 63.695 63.726 3 0.023395 20016 20230619_1882_Aki_TMTPro18x_K_F3 57.225 40.594 41793 23438 20254 30720 16589 24577 18648 23178 17918 30956 26375 20244 26453 19101 29172 29855 36232 34283 38405 21554 22371 30326 17684 25271 18692 23981 18694 30514 26635 21019 27109 20348 30008 30066 34585 32522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85258000 902 3872 866 1633 1341 1341 1 9606 Homo sapiens 0.017290094234567732 AFSVNIFK Unmodified 924.5069 0.50690308 783 B3KRY3;A0A024RDY3;P11279;P11279-2 LAMP1 Lysosome-associated membrane glycoprotein 1 yes no 0 0 0 4.5 0.5 1 1 61.373 61.399 2 0.025374 18511 20230619_1885_Aki_TMTPro18x_K_F5 91.069 44.503 87285 65234 78125 85446 77698 91407 94005 89605 108740 90249 92480 104180 106840 84386 84119 122240 123180 139650 80596 59909 80176 84699 81256 91912 94272 91710 109250 91626 96339 104490 107520 89756 88309 123060 117600 132400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53799000 903 783 867 1634;1635 1342 1342 1 9606 Homo sapiens 0.04162990248414644 AFSYYGPLR Unmodified 1072.5342 0.53418046 981 A0A0B4J1Z1;B4DEK2;C9JAB2;Q16629-3;Q16629-2;Q16629-4;Q16629;Q8NB80 SRSF7 Serine/arginine-rich splicing factor 7 yes no 0 0 0 4 0 1 53.167 53.187 2 0.00011547 15442 20230619_1883_Aki_TMTPro18x_K_F4 125.81 92.973 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 904 981 868 1636 1343 1343 1 9606 Homo sapiens 0.0008147378880494216 AFTATVYN Unmodified 885.42323 0.42323303 4547 Q9HBM1 SPC25 Kinetochore protein Spc25 yes yes 0 0 0 6.5 0.5 1 1 52.769 52.843 2 0.020313 15153 20230619_1886_Aki_TMTPro18x_K_F6 88.734 82.824 42184 42403 47735 45159 44508 55229 56631 50953 70949 42567 47247 37768 37593 34672 54942 44714 37181 37757 39105 38823 47982 45538 46860 54983 56807 52134 70403 43388 49138 38509 39509 36379 54530 44420 35751 35933 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26174000 905 4547 869 1637;1638 1344 1344 1 9606 Homo sapiens -0.024061659192966545 AFTCDDLFR Unmodified 1143.5019 0.50189405 3699 P61599;P61599-2 NAA20 N-alpha-acetyltransferase 20 yes no 0 0 0 5 0 1 55.852 55.916 2 0.0016084 16241 20230619_1885_Aki_TMTPro18x_K_F5 114.2 100.69 108020 92971 103840 106340 86489 112650 114060 109250 124100 126140 107290 107620 133500 99631 106860 145380 125190 136090 99881 85220 105610 106410 92091 113340 113720 112310 125270 126010 112010 109860 134080 105530 110360 144710 119680 129320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46621000 906 3699 870 1639 1345 1345 1 9606 Homo sapiens -0.06411681676513581 AFTELFQVACAKPPPLGLCDYPSSR Unmodified 2823.3724 0.37240679 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 1 4 0 1 63.621 63.629 4 2.8266E-08 19880 20230619_1883_Aki_TMTPro18x_K_F4 105.73 94.423 13316 12242 13513 16698 14074 15926 17223 16914 16413 19535 22192 19671 18452 19418 22769 20691 19875 26855 12324 11239 13741 16481 14655 16183 17162 17284 17001 19600 22327 19965 19174 20101 22910 21122 19092 25416 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78465000 907 307 871 1640 1346 1346 1 9606 Homo sapiens 0.03365548437614052 AFTELQAK Unmodified 906.48108 0.48108226 3289 O60925;E5RGS4 PFDN1 Prefoldin subunit 1 yes no 0 0 0 7 0.816 1 1 1 49.809 49.887 2 0.0023852 13538 20230619_1887_Aki_TMTPro18x_K_F7 127.56 71.554 103220 85962 108260 103310 106050 119080 112210 109830 133080 136810 159550 139550 141710 106210 105240 162790 161260 162530 95498 78843 109490 103150 110520 119010 113470 113560 135430 136890 161460 140540 143410 113720 111070 162460 153760 154370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 242380000 908 3289 872 1641;1642;1643 1347 1347 1 9606 Homo sapiens 0.024100960061332444 AFTHTAQYDEAISDYFR Unmodified 2033.9119 0.91191986 3534;2560 B4DP06;C9JLK0;V9HWH7;P31939;B2R7P8;P31939-2 ATIC;HEL-S-70p Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 0 6.5 1.12 1 1 1 1 57.514 57.573 3 3.8411999999999996E-72 17075 20230619_1886_Aki_TMTPro18x_K_F6 336.79 307.45 235250 189930 240560 237630 210980 235410 223830 232960 230460 277640 279010 279610 293160 253060 307250 325970 294420 331820 217550 174290 243430 236090 221820 238180 225360 239360 236600 278150 284700 282940 299410 265770 311600 326670 282080 314960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1009299999.9999999 909 2560;3534 873 1644;1645;1646;1647 1348;1349;1350 1349 3 9606 Homo sapiens -0.0636796238354691 AFTKPEEACSFILSADFPALVVK Unmodified 2539.3032 0.30324782 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2;F8WD69;C9JBJ1;C9JTV6;H7C366 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 1 2 0 1 64.174 64.182 4 2.9219E-08 20490 20230619_1881_Aki_TMTPro18x_K_F2 111.13 95.652 14261 11532 14043 15189 12076 16326 12044 14755 16689 16973 17090 15642 18110 13365 14144 19945 17711 20565 13184 10588 14262 15050 12732 16377 12305 15235 16761 16994 17543 15875 18251 14223 14683 19950 16931 19516 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48111000 910 3488 874 1648 1351 1351 1 9606 Homo sapiens 0.09516832480312587 AFTMDCITLEGDQVSHR Oxidation (M) 1994.8826 0.88261034 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 1 0 3.5 0.5 1 1 48.42 48.48 3 5.0917E-14 13268 20230619_1883_Aki_TMTPro18x_K_F4 163.9 159.59 37286 30795 37582 40647 33608 36103 39619 34720 42372 44779 46776 44411 46173 44405 49698 49313 51972 46687 34481 28273 38109 40175 35372 36826 39689 35865 43196 44711 47758 45112 47347 46038 50596 49338 49668 44390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205080000 911 4191 875 1649;1650 1352 1352 2696 1 9606 Homo sapiens -0.07503565995716599 AFTMDCITLEGDQVSHR Unmodified 1978.8877 0.88769572 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 4 0 1 54.195 54.21 3 2.2553E-18 15888 20230619_1883_Aki_TMTPro18x_K_F4 176.23 161.07 42766 29612 37746 42936 36253 40832 39103 39847 42734 48073 42756 49930 50557 49235 47048 58460 56454 56608 39468 27235 38767 42221 37872 41415 39391 41006 43382 48196 44266 50567 51240 51267 48485 58464 53925 53786 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 697480000 912 4191 875 1651 1353 1353 1 9606 Homo sapiens -0.0625926213308503 AFTNYSSLNR Acetyl (Protein N-term) 1213.5728 0.57275081 4760 Q9Y6X9 MORC2 MORC family CW-type zinc finger protein 2 yes yes 1 0 0 6 0 1 52.084 52.161 2 0.0074565 14854 20230619_1886_Aki_TMTPro18x_K_F6 49.527 35.01 132750 138250 143590 119620 178500 192980 180230 163030 202210 67702 72569 59130 65345 56038 84899 68374 62748 56829 123040 126360 145360 123460 182630 188980 182150 166060 199150 73552 80215 60459 67896 58548 84673 67930 60210 54120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33094000 913 4760 876 1652 1354 1354 1 9606 Homo sapiens -0.025492653673154564 AFTYINLDK Unmodified 1083.5601 0.56006086 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 1.5 0.5 1 1 59.035 59.042 3 6.1119E-05 18231 20230619_1881_Aki_TMTPro18x_K_F2 143.7 118.85 197270 163860 179200 182480 136990 180300 135940 157110 160440 165320 161130 140640 164250 139280 138570 205330 165570 160690 182290 150190 182900 182780 145940 181950 138100 162320 162170 165900 165250 144040 166340 147170 143230 202570 158120 153110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1159400000 914 1817 877 1653;1654 1355 1355 1 9606 Homo sapiens 0.021623232403953807 AFVAGVLPFK Unmodified 1047.6117 0.6117025 2123 A8K8K1;O00442;O00442-2 RTCA RNA 3'-terminal phosphate cyclase yes no 0 0 0 5 0 1 62.755 62.801 3 0.010913 19190 20230619_1885_Aki_TMTPro18x_K_F5 67.993 50.261 179520 161620 161400 177660 148220 193900 168020 187970 188240 167100 158870 140100 172460 121740 158560 178470 152630 146360 165960 148070 165390 178360 155840 194670 168980 191820 189440 169190 164870 142970 174750 129280 161260 176580 146050 139380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121580000 915 2123 878 1655 1356 1356 1 9606 Homo sapiens 0.08980111724986273 AFVDFLSDEIK Unmodified 1282.6445 0.64451877 2086 A8K651;Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes no 0 0 0 6 0.816 1 1 1 64.237 64.277 3 1.871E-06 19854 20230619_1885_Aki_TMTPro18x_K_F5 132.32 71.885 117360 92688 82890 115670 67893 120730 84132 108900 163010 135080 142140 186470 173380 197350 128730 249400 235210 274360 108230 85060 87082 114930 71445 121310 85212 112750 160690 136810 148400 187400 174340 205740 138240 250780 224290 260180 3 3 3 3 2 3 2 3 3 3 3 3 3 3 3 3 3 3 629190000 916 2086 879 1656;1657;1658 1357;1358;1359 1357 3 9606 Homo sapiens 0.014502292665156347 AFVDFNEGEIK Unmodified 1267.6085 0.60846762 1391 Q504W7;A0A2X0TVZ9;Q01968-2;Q01968;A0A2R8YCN4;A0A2R8YG38 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes no 0 0 0 4 0 1 58.787 58.789 3 0.0003525 17807 20230619_1883_Aki_TMTPro18x_K_F4 98.156 69.2 33915 24699 31397 36294 33345 37258 33733 30422 42654 40281 37523 39828 41449 36553 41363 44049 43750 44258 31319 22714 32161 35689 34516 37437 34259 31835 42758 40187 38935 40332 42189 38207 42208 44151 41841 42033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22750000 917 1391 880 1659 1360 1360 1 9606 Homo sapiens -0.01463227910335263 AFVEAQNK Unmodified 905.46068 0.46068117 3598 P48147;Q9UM02;B2RAH7 PREP Prolyl endopeptidase yes no 0 0 0 6 0 1 43.175 43.268 2 0.00079946 10905 20230619_1886_Aki_TMTPro18x_K_F6 155.82 102.26 91873 50938 95540 105410 120560 133350 107110 128330 141160 74488 111100 101400 90596 80264 114770 55011 126560 102360 84809 47136 97180 102240 122930 132480 109860 129950 140400 79084 114480 101020 94310 82202 116580 58539 120810 96807 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50489000 918 3598 881 1660 1361 1361 1 9606 Homo sapiens 0.004169253463260247 AFVELTK Unmodified 806.4538 0.45380487 1553 O95394-4;J3KN95;H0Y987;A0A8V8TMH7;B3KN28;A0A8V8TLT8;A0A494C1Q4;A0A8V8TNH4;A0A494C1E2;A0A8V8TMI1;O95394;O95394-3;A0A087WT27;A0A494C0G1;A0A8V8TM25;A0A494C099;H0Y8I3;A0A494C163;D6RIS6 PGM3 Phosphoacetylglucosamine mutase yes no 0 0 0 8 0 1 53.516 53.587 2 0.0038695 15090 20230619_1888_Aki_TMTPro18x_K_F8 119.21 37.253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 919 1553 882 1661 1362 1362 1 9606 Homo sapiens 0.042836124657469554 AFVENYPQFK Unmodified 1241.6081 0.60807369 1281 Q9NRW7-2;A0A8V8TMG7;A0A2R8YD95;A0A8V8TNE7;A0A8V8TNR0;A0A8V8TNQ5;A0A8V8TMH2;A0A8V8TM05;A0A1B0GXI6;A0A8V8TLW3;B7Z5D4;A0A8V8TNG0;A0A8V8TNB6;A0A8V8TMF8;A0A2R8YE10;A0A8V8TMD1;A0A8V8TNM6;Q9NRW7;A0A8V8TLX8;A0AR27;A0A8V8TM00;B7Z5E4;A0A8V8TM10;A0A2R8YF01;A0A8V8TMG3;A0A8V8TMC6;A0A8V8TLX3;B7Z1J7;A0A8V8TNF0;A0A2R8YEX8;Q5T4Q0 VPS45 Vacuolar protein sorting-associated protein 45 yes no 0 0 0 4.5 3.5 1 1 56.321 56.321 2 0.037214 16337 20230619_1888_Aki_TMTPro18x_K_F8 75.38 56.765 19661 16334 16293 21602 17861 22879 17348 18885 23882 21046 23416 24102 27653 22903 26837 26391 29007 29165 18156 14996 16888 21385 18462 22936 17729 19630 23937 21260 24240 24295 28048 23856 27420 26622 27734 27671 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28279000 920 1281 883 1662;1663 1363;1364 1364 2 9606 Homo sapiens -0.003066028395323883 AFVESSK Unmodified 766.38612 0.38611924 3502 P25490;A0A994J726;Q96MM3 YY1;ZFP42 Transcriptional repressor protein YY1;Zinc finger protein 42 homolog yes no 0 0 0 5.5 0.5 1 1 42.941 43.028 2 0.024962 10661 20230619_1886_Aki_TMTPro18x_K_F6 104.21 53.243 86360 48235 107890 101960 128720 143360 103930 124110 128030 98360 142180 167700 137770 127140 136190 70002 170420 160080 79861 44648 108080 99000 131380 141260 107080 127390 129500 102930 145200 165520 140750 129510 140010 76541 162650 151120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162420000 921 3502 884 1664;1665 1365 1365 1 9606 Homo sapiens -0.006418374650365877 AFVEWSQALLLAPEGSR Unmodified 1872.9734 0.9733979 2288 D3DWK1;B2RAR6;Q9BW34;Q9H7G6;Q71RH4 EEF1D yes no 0 0 0 2 0 1 65.156 65.163 3 3.3115E-06 20885 20230619_1881_Aki_TMTPro18x_K_F2 102.58 80.346 7759.5 7979.6 7486.1 7450 10335 9612.8 9346.9 7435.9 9653.5 4508.5 6103.8 5581.6 8684.3 6152.7 9691.7 4503.4 5549.2 6633.7 7184.4 7297.6 7668.2 7600.4 10468 9516.7 9483.5 7675.9 9661.5 4760 6545.5 5640.7 8816.2 6249.8 9579.6 4689 5357 6274.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17226000 922 2288 885 1666 1366 1366 1 9606 Homo sapiens 0.07183014106431074 AFVHWYVGEGMEEGEFSEAR Oxidation (M) 2345.0059 0.005896599 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;B4DN58;Q15670;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;C9J2C0;Q9NY65-2;Q9NY65 TUBA1B;TUBA4A;TUBA1A;TUBA1C;TUBA2;TUBA8 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain no no 0 1 0 3.5 1.12 1 1 1 1 56.303 56.334 3 1.9502999999999999E-22 17108 20230619_1881_Aki_TMTPro18x_K_F2 174.19 159.27 183770 150710 177260 223770 193200 206700 199870 178240 226600 219170 237640 256400 238470 232180 235200 243800 201650 264010 169880 138550 181110 219580 199570 209630 201950 185340 229780 220510 243490 257700 243330 240780 237450 245950 193700 250320 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 565830000 923 2408;3747;4144 886 1667;1668;1669;1670 1367;1368;1369;1370 1367 1483 4 9606 Homo sapiens -0.11280611343545388 AFVHWYVGEGMEEGEFSEAR Unmodified 2329.011 0.010981977 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;B4DN58;Q15670;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;C9J2C0;Q9NY65-2;Q9NY65 TUBA1B;TUBA4A;TUBA1A;TUBA1C;TUBA2;TUBA8 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain no no 0 0 0 4 1.41 1 1 1 1 1 59.97 60.001 3 2.1306E-37 18423 20230619_1882_Aki_TMTPro18x_K_F3 239.75 220.71 168610 128490 168560 189960 121270 164560 162620 138330 269810 179760 163920 214110 208290 196620 209650 181040 169120 218350 155840 118150 170680 186350 131260 167620 164780 144440 264330 180790 175470 214940 211360 202520 210780 184400 162550 206810 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 339770000 924 2408;3747;4144 886 1671;1672;1673;1674;1675 1371;1372;1373;1374;1375;1376 1372 6 9606 Homo sapiens -0.10036307480959294 AFVPPLAEDLLAR Unmodified 1410.7871 0.78710068 954 F5GWN4;F8WBT0;A0A0A0MSJ2;E7EU13;B7ZMI2;A0A2X0SFK3;Q96P48-5;Q96P48-7;Q96P48-2;Q96P48-4;Q96P48-1;Q96P48-3;Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 8 0 1 64.211 64.231 2 0.0081348 19621 20230619_1888_Aki_TMTPro18x_K_F8 97.284 67.936 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 925 954 887 1676 1377 1377 1 9606 Homo sapiens 0.09813861728571283 AFVRPSGTEDVVR Unmodified 1431.747 0.74702678 1553 O95394-4;J3KN95;H0Y987;A0A8V8TMH7;B3KN28;A0A8V8TLT8;A0A494C1Q4;A0A8V8TNH4;A0A494C1E2;A0A8V8TMI1;O95394;O95394-3;A0A087WT27;A0A494C0G1;A0A8V8TM25;A0A8V8TNM1 PGM3 Phosphoacetylglucosamine mutase yes no 0 0 1 6.5 0.5 1 1 40.419 40.499 3 2.8184E-12 9717 20230619_1886_Aki_TMTPro18x_K_F6 164.2 125.41 135370 110840 128340 140480 149520 158320 169710 165720 197430 151510 162060 178530 176440 145310 167350 177020 172420 185970 125120 101720 131360 139680 154150 158910 170740 168420 198010 154760 168700 178880 179180 152680 170670 177860 165010 176490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 278250000 926 1553 888 1677;1678 1378;1379 1378 2 9606 Homo sapiens 0.048423150579765206 AFVSYVQAYAK Unmodified 1245.6394 0.63937381 690 F5H5U2;A0A384N652;A0A024RBS0;Q8NHQ9;Q8NHQ9-2 DDX55 ATP-dependent RNA helicase DDX55 yes no 0 0 0 4 0 1 60.701 60.703 3 0.00033081 18606 20230619_1883_Aki_TMTPro18x_K_F4 80.706 65.694 42854 38396 35637 37933 35729 45414 42502 39763 44612 35322 37388 32189 33054 32033 38497 35210 34101 39607 39595 35145 36826 38465 37348 45230 42519 40900 45005 35866 38493 32839 34156 33212 38792 35590 32708 37552 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8821500 927 690 889 1679 1380 1380 1 9606 Homo sapiens 0.02637970194564332 AFVTDWDK Unmodified 980.46035 0.46034682 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q96T67 ATAD3A ATPase family AAA domain-containing protein 3A yes no 0 0 0 6 0 1 56.432 56.506 2 0.0036592 16654 20230619_1886_Aki_TMTPro18x_K_F6 118.74 73.113 113260 92136 101100 107400 104400 131360 136630 147740 162370 153510 137970 149030 179390 154750 137590 179510 176080 166840 104630 84487 103840 107560 109220 131350 136660 149860 163030 154720 144560 151700 179850 160730 142990 179170 168040 158640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159270000 928 4603 890 1680 1381 1381 1 9606 Homo sapiens -0.030664943735246197 AFYAPVHADDLR Unmodified 1373.6728 0.67279921 2714 Q59GB7;G3XAL9;B7ZM24;Q53ZR1;P55011-3;P55011 SLC12A2 Solute carrier family 12 member 2 yes no 0 0 0 5 0 1 46.645 46.722 3 0.00059609 12346 20230619_1885_Aki_TMTPro18x_K_F5 92.792 70.151 38835 27741 37093 39924 35490 39718 39128 38869 53538 43152 42532 39107 46089 37264 38405 52033 65827 48388 35868 25508 37818 39304 37122 40148 39685 39888 53263 43287 44277 39857 46591 39291 40767 51803 62597 46062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46967000 929 2714 891 1681 1382 1382 1 9606 Homo sapiens 0.0009097196646052907 AFYGDTLVTGFAR Unmodified 1416.7038 0.70376498 1223 Q9HCC0;Q9HCC0-2;A0A804HLJ9;A0A140VK29;A0A804HKE8;A0A804HJ24;A0A804HK37;A0A804HJ31;A0A804HL02;A0A804HJL2 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 1.67 0.471 1 2 61.053 61.06 2;3 5.8024E-05 19060 20230619_1881_Aki_TMTPro18x_K_F2 79.613 67.845 62897 62754 68128 68966 63375 75306 80272 82796 81346 80353 79265 73846 80691 75642 75595 91831 86823 88132 58279 57474 68723 69263 66664 75843 80007 83978 82734 81135 81461 75378 82128 78797 77671 91768 82972 83743 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 180860000 930 1223 892 1682;1683;1684 1383;1384 1384 2 9606 Homo sapiens 0.012081252807092824 AFYLEAR Unmodified 868.4443 0.44430282 4280 Q8WUY1;H0YAR9 THEM6 Protein THEM6 yes no 0 0 0 7 0 1 48.544 48.631 2 0.017062 12966 20230619_1887_Aki_TMTPro18x_K_F7 109.11 78.049 212250 194600 217230 212400 155260 179790 197070 203560 227870 191540 201780 195620 197020 167940 219090 239850 250060 221330 196440 178260 219280 212770 167380 184890 197360 206060 229220 194370 208080 197620 202360 177920 224210 238770 238760 210520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88798000 931 4280 893 1685 1385 1385 1 9606 Homo sapiens 0.0048184418022856335 AFYPEEISSMVLTK Oxidation (M) 1629.796 0.79601039 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;B4DNT8;Q59EJ3;B4DI39;B4DWK5;Q9UQC1 HSPA1A;HSPA1B;HEL-S-103;HSP70-1 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B no no 0 1 0 6.5 0.5 1 1 61.577 61.623 3 0.0032886 18675 20230619_1887_Aki_TMTPro18x_K_F7 70.412 58.972 30588 37226 34201 34484 46792 50962 36386 38318 58222 47144 42434 35798 64363 44163 44500 58155 57246 51401 28398 34026 34628 35284 47358 50022 37958 40228 57469 46888 45170 37193 63997 46075 46373 57795 54609 48914 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227740000 932 1031 894 1686;1687 1386 1386 598 1 9606 Homo sapiens 0.006304225120402407 AFYPEEISSMVLTK Unmodified 1613.8011 0.80109577 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;B4DNT8;Q59EJ3;B4DI39;B4DWK5;Q9UQC1 HSPA1A;HSPA1B;HEL-S-103;HSP70-1 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B no no 0 0 0 8 0 1 63.55 63.573 3 3.961E-08 19339 20230619_1888_Aki_TMTPro18x_K_F8 145.17 122.03 134850 129440 159840 241280 197820 253100 196170 223890 227780 288360 338580 254180 312100 236280 251450 375940 349920 297610 125020 119300 161410 234270 202660 254100 199010 232400 234840 286840 340320 259520 316340 251760 262880 370750 333490 283700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1527999999.9999998 933 1031 894 1688 1387 1387 1 9606 Homo sapiens 0.018747263746490717 AGAAGGPEEEAEKPVK Unmodified 1538.7577 0.75765105 4283 Q8WW12;Q8WW12-2 PCNP PEST proteolytic signal-containing nuclear protein yes no 0 0 1 3 0.816 2 2 2 40.61 40.668 3;4 2.1539E-14 10086 20230619_1881_Aki_TMTPro18x_K_F2 177.74 166.3 487140 367000 444430 420990 542160 570510 536680 504400 622940 619670 692840 655020 687210 566550 602440 683640 755640 637350 449890 336580 456330 422820 555240 564200 544070 522870 632560 621250 706970 660550 697500 593500 622940 682360 720700 606280 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 871090000 934 4283 895 1689;1690;1691;1692;1693;1694 1388;1389;1390;1391;1392 1388 5 9606 Homo sapiens 0.00982252921721738 AGAANSQLSTSQPSLR Unmodified 1586.8012 0.8012472 2615 G5EA44;B4DWJ9;F5H7W8;Q96C57 C12orf43 Uncharacterized protein C12orf43 yes no 0 0 0 8 0 1 39.781 39.77 3 1.9459E-06 9396 20230619_1888_Aki_TMTPro18x_K_F8 88.311 55.121 135660 200370 197280 165250 144570 216040 187540 165940 153430 203400 176400 167530 132330 131730 242980 109520 259690 190840 126550 182920 194370 170670 155640 213510 185660 174010 159360 202370 178170 170240 141880 135990 245270 115390 247840 180650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 70990000 935 2615 896 1695 1393;1394 1393 2 9606 Homo sapiens 0.031318624188998 AGAAPYVQAFDSLLAGPVAEYLK Unmodified 2350.2209 0.2208984 2327 B2RDY9;D3DPU2;Q01518;B4DI38;Q5T0R2;Q5T0R1;Q5T0R4;Q5T0R3;Q5T0R5;Q5T0R6;Q5T0R7 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 0 0 2 0 1 67.542 67.549 3 4.9384E-05 21800 20230619_1881_Aki_TMTPro18x_K_F2 76.027 65.559 1139.7 1318.4 1607 1867.2 1194.3 1751.8 1096.4 0 1571.9 1727.7 974.49 0 2068.4 2115.7 0 1218.2 1480.5 1937.6 1060.2 1210 1589 1836.2 1273.8 1739.6 1124.2 0 1554.5 1606.8 1066 0 1981.8 2067.2 0 1275.1 1405.4 1831.1 1 1 1 1 1 1 1 0 1 1 1 0 1 1 0 1 1 1 1870100 936 2327 897 1696 1395 1395 1 9606 Homo sapiens 0.09979678463741948 AGACVTSESTVVR Unmodified 1335.6453 0.64526383 4452 Q9BVL4;Q6ICA4 SELO;dJ402G11.5 Selenoprotein O yes no 0 0 0 4 0 1 38.285 38.328 2 1.2941E-07 8854 20230619_1883_Aki_TMTPro18x_K_F4 149.96 121.75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 937 4452 898 1697 1396 1396 1 9606 Homo sapiens -0.009132993560797331 AGADEERAETAR Unmodified 1274.5851 0.58510641 3756 V9HW96;P78371;F5GWF6;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 1 1 0 1 27.046 27.046 3 7.2731E-14 4846 20230619_1880_Aki_TMTPro18x_K_F1 215.85 164.57 19159 10835 25104 23597 44397 30663 23129 37525 21754 17389 24750 23854 22875 20760 35183 11546 30551 24887 17727 10034 25256 22865 43852 30644 24563 37271 22368 18830 25195 23819 23993 21042 35168 12577 29237 23517 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 246870000 938 3756 899 1698 1397 1397 1 9606 Homo sapiens -0.04120273694957177 AGAEDDEEKGEGTPR Unmodified 1559.67 0.66995825 2587 E7ERS3;B4DTK7;Q86VM9 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 0 0 1 1 0 1 32.955 32.955 3 0.00024643 7157 20230619_1880_Aki_TMTPro18x_K_F1 102.52 87.133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 939 2587 900 1699 1398 1398 1 9606 Homo sapiens -0.08748992739674577 AGAEGFVR Unmodified 805.40825 0.40825167 4444 Q9BUP3;Q9BUP3-3 HTATIP2 Oxidoreductase HTATIP2 yes no 0 0 0 5 0 1 38.232 38.325 2 0.027973 8841 20230619_1885_Aki_TMTPro18x_K_F5 81.89 47.788 48106 42484 46485 48444 65000 61811 70128 72664 84429 61930 71640 72442 73676 58986 63689 87383 90703 74731 44492 38937 47650 48637 66123 61763 70820 73164 84611 63504 74190 72678 74673 62776 66554 86574 86412 71173 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29885000 940 4444 901 1700 1399 1399 1 9606 Homo sapiens -0.0022361299662634337 AGAGALLR Unmodified 727.43407 0.43407249 2433 B3KWQ6;P41219;P41219-2 PRPH Peripherin yes no 0 0 0 1.5 0.5 1 1 40.149 40.184 2 0.01762 9926 20230619_1881_Aki_TMTPro18x_K_F2 91.14 8.0528 299050 228100 282170 322800 363440 368960 354560 350290 435870 252040 315890 268030 273430 259480 309110 243350 352580 276930 276280 209640 289490 318670 370730 369120 360380 356570 433960 260870 327650 271320 282410 267020 315690 246950 336400 262950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1391000000 941 2433 902 1701;1702 1400 1400 1 9606 Homo sapiens 0.05945281245658407 AGAGGGNDIQWCFSQVK Acetyl (Protein N-term) 1835.8261 0.82608174 1204 A0A140VJT0;P63151;Q56VW8;E5RIY1;E5RJV2;E5RHQ2 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B no no 1 0 0 5 0 1 62.313 62.36 3 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98408000 942 1204 903 1703 0 9606 Homo sapiens -0.058398257700446266 AGAGPGGPPQKPAPSSQR Unmodified 1658.8489 0.84886609 2289 B2RAX6;Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 0 0 1 2 0 1 34.687 34.744 3 6.0341E-11 7566 20230619_1881_Aki_TMTPro18x_K_F2 147.09 107.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 943 2289 904 1704 1401 1401 1 9606 Homo sapiens 0.04579561409741473 AGAGSAAVSGAGTPVAGPTGR Acetyl (Protein N-term) 1752.8755 0.87547477 3353 O95295 SNAPIN SNARE-associated protein Snapin yes yes 1 0 0 5 0 1 43.614 43.694 2 7.7763E-37 11080 20230619_1885_Aki_TMTPro18x_K_F5 181.76 173.22 2042.3 1339.9 1311.8 1706.6 2231.1 1578.6 752 2082.4 3223.5 2204.3 2153.5 3018.9 3163.3 2606 1998.1 2515.4 3450.9 4515 1880.5 1230.8 1407 1691.8 2206.2 1619.9 923 2092.3 3101.3 2247.8 2307.2 3010.3 3142.6 2700.5 2135.4 2638.7 3295.1 4263.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44008000 944 3353 905 1705 1402 1402 1 9606 Homo sapiens 0.02915205510407759 AGAGSATLSMAYAGAR Oxidation (M) 1469.6933 0.69327665 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 1 0 3.67 3.09 1 1 1 42.2 42.24 2;3 6.6676E-09 11042 20230619_1880_Aki_TMTPro18x_K_F1 141.85 119.82 110680 75652 112810 124940 139140 118740 129840 152560 128210 153230 211670 238590 189440 169430 180970 140990 215060 228250 102250 69696 114840 122010 141880 121330 131540 153520 134050 157240 212450 235790 193670 175580 185830 147170 205530 215820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 544570000 945 297 906 1706;1707;1708 1403;1404 1403 182 2 9606 Homo sapiens -0.022782254360208753 AGAGSATLSMAYAGAR Unmodified 1453.6984 0.69836203 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 2 0.816 2 2 2 47.204 47.256 2;3 9.1759E-64 12878 20230619_1882_Aki_TMTPro18x_K_F3 322.99 287.67 226270 179760 211950 238250 212070 225600 227650 246300 245600 245350 236500 246950 260100 234800 285340 254940 268390 229290 209080 165070 216630 235620 220650 229560 229290 250150 248940 248020 244300 250180 265980 243560 288580 254590 256690 218200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1541299999.9999998 946 297 906 1709;1710;1711;1712;1713;1714 1405;1406 1406 2 9606 Homo sapiens -0.010339215734120444 AGAHLQGGAK Unmodified 908.48281 0.48281359 3382 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q0QET7;A4UCT1;B4DRV9 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 4.5 3.04 1 1 1 1 31.278 31.321 3 9.2993E-06 6523 20230619_1880_Aki_TMTPro18x_K_F1 130.66 58.171 503860 195110 675890 645850 1111800 946900 797940 1087700 720900 363800 823000 914900 491500 629060 896670 231760 836490 696590 465690 182780 678290 618500 1108800 937310 821270 1081200 741050 422990 826510 893670 532700 636550 897540 267660 799960 657210 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3387099999.9999995 947 3382 907 1715;1716;1717;1718 1407;1408;1409;1410;1411 1407 5 9606 Homo sapiens 0.024911498147503153 AGAIAPCEVTVPAQNTGLGPEK Unmodified 2179.0943 0.094317676 691 P05388;A8K4Z4;A0A024RBS2;F8VU65;P05388-2;Q53HW2;Q53HK9;F8VWS0;Q6NSF2;F8VPE8;G3V210;F8VW21;F8VRK7;F8VQY6;Q8NHW5;B4E3D5 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 6.5 0.5 2 2 54.502 54.572 3;4 6.3806E-17 15794 20230619_1886_Aki_TMTPro18x_K_F6 149.36 138.98 394870 303040 351560 400540 343940 397850 384430 412380 414630 513470 450760 419490 515180 447100 430900 562350 507250 495440 364660 278300 360910 396400 359190 402780 386400 422870 422790 510500 463360 431260 519860 466350 444590 559140 484520 471330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5986699999.999999 948 691 908 1719;1720;1721;1722 1412;1413;1414 1414 3 9606 Homo sapiens 0.05193428966913416 AGAISASGPELQGAGHSK Unmodified 1636.8169 0.81689726 3815 Q09666;B4DTV0 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 7 0 1 41.06 41.128 3 2.2028E-06 9753 20230619_1887_Aki_TMTPro18x_K_F7 98.316 83.87 31539 21585 31742 28712 30640 39033 36454 33603 43312 39389 42985 42688 46364 42180 37920 53158 59004 58316 29135 19834 32202 28547 32116 38543 36627 34858 43710 39621 44255 43199 46857 44104 39954 53479 56246 55337 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64756000 949 3815 909 1723 1415 1415 1 9606 Homo sapiens 0.023961489359408006 AGAKPDQIGIITPYEGQR Unmodified 1913.0007 0.0006752871 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A8A5YP40;B3KY55 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 1 7.5 0.5 1 1 49.848 49.925 3 8.9082E-14 13487 20230619_1888_Aki_TMTPro18x_K_F8 158.52 148.42 257530 212060 219090 239320 221720 225530 254300 244900 297880 304200 286150 276080 338010 255650 268340 345470 310470 319720 237840 194390 225900 239360 230960 229690 255860 250470 300700 303390 296280 280950 339830 269280 276850 344040 296710 303910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 266640000 950 462 910 1724;1725 1416 1416 1 9606 Homo sapiens 0.08069497646761192 AGALHAQVER Unmodified 1050.557 0.55704117 4412 Q9BQG0;Q9BQG0-2;I3L1L3 MYBBP1A Myb-binding protein 1A yes no 0 0 0 5 0.816 1 1 1 31.349 31.407 3 1.1161E-05 6075 20230619_1883_Aki_TMTPro18x_K_F4 136.84 98.754 31097 28558 37281 39446 44223 50616 41036 43652 49817 32744 38310 40924 42542 34603 42702 35025 44657 38427 28824 26222 37477 39072 45309 50156 41836 44779 49747 33960 40060 40959 43287 35931 43480 35412 42665 36485 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85003000 951 4412 911 1726;1727;1728 1417 1417 1 9606 Homo sapiens 0.03378492906290376 AGALMMPLVDQLENR Unmodified 1656.8327 0.83274702 2332 B2RWN5;B4E263;Q96ES5 HEATR1 yes no 0 0 0 7 0 1 63.619 63.652 3 0.011675 19511 20230619_1887_Aki_TMTPro18x_K_F7 63.29 54.777 39827 32298 40564 44889 46171 47369 49592 46733 56019 46125 42750 50054 54679 40391 45675 44934 44468 52106 36830 29671 41255 44318 47577 47697 49985 47785 56175 46782 45058 50271 54956 42263 46534 45488 42612 49386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40061000 952 2332 912 1729 1418 1418 1 9606 Homo sapiens 0.0306039585700546 AGALNSNDAFVLK Unmodified 1318.6881 0.68811492 2798 CON__Q3SX14;P06396-3;A0A384MEF1;A0A0A0MT01;B7Z6N2;A0A8V8TND7;B7Z9A0;A0A0A0MS51;B7Z992;B7Z2X4;B7Z4U6;P06396-4;P06396-2;P06396;B3KS49 GSN Gelsolin yes no 0 0 0 7.5 0.5 1 1 56.017 56.077 3 0.0018261 16196 20230619_1888_Aki_TMTPro18x_K_F8 74.46 34.011 + 48499 32508 41213 45713 47449 67553 61201 50775 74487 53428 52488 62190 57630 42943 60262 56705 60373 58912 44739 29892 42626 45333 49313 66208 61254 53122 74189 54173 55197 62045 58750 45683 61216 56898 57754 55937 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65231000 953 2798 913 1730;1731 1419 1419 1 9606 Homo sapiens 0.041518387636415355 AGALQCSPSDAYTK Unmodified 1467.6664 0.6663932 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 7 0 1 45.257 45.343 3 1.1463E-05 11448 20230619_1887_Aki_TMTPro18x_K_F7 110.25 97.133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 954 1292 914 1732 1420 1420 1 9606 Homo sapiens -0.048733340472381315 AGAPWHLR Unmodified 906.48242 0.48241966 2504 B4DJL3;Q9BUE0 MED18 Mediator of RNA polymerase II transcription subunit 18 yes no 0 0 0 3 0 1 39.616 39.67 3 0.0021303 9478 20230619_1882_Aki_TMTPro18x_K_F3 107.32 89.469 31414 25991 33448 29687 33630 38587 29280 35013 40056 32892 37692 32319 35284 35620 35453 40637 36992 35966 29066 23827 33783 29809 34829 38262 30138 35935 40081 33363 38641 32991 36136 36867 36163 40485 35372 34214 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22307000 955 2504 915 1733 1421 1421 1 9606 Homo sapiens 0.025437748855551945 AGASIPSSGAASPR Unmodified 1227.6208 0.62076364 592 A0A024R9T6;Q9P270 hCG_17415;SLAIN2 SLAIN motif-containing protein 2 yes no 0 0 0 7.5 0.5 1 1 36.115 36.183 2 1.9066999999999998E-19 7952 20230619_1888_Aki_TMTPro18x_K_F8 198.81 134.1 15463 10913 13199 15879 16083 19357 16759 15372 20988 17581 17256 17261 20305 14445 18687 17402 20253 18108 14269 10036 13658 15661 16520 19209 16980 16042 20990 17651 18015 17439 20533 15165 19108 17484 19348 17200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12453000 956 592 916 1734;1735 1422;1423 1423 2 9606 Homo sapiens 0.0160580855272201 AGATLDLLVENMGR Unmodified 1458.7501 0.75006325 2692 E7EQ29;B7Z5H9;Q53H18;Q53G40;B7Z6Q5;P16278-2;P16278-3;P16278 GLB1 Beta-galactosidase yes no 0 0 0 7 0 1 63.047 63.08 3 0.00078724 19195 20230619_1887_Aki_TMTPro18x_K_F7 84.566 63.108 17862 14993 20658 23256 21985 26490 21625 22150 24184 24920 24108 26688 27734 23819 23862 25360 25978 29578 16540 13790 20790 22831 22733 26426 21913 23004 24507 25092 24914 26901 28008 24752 24458 25693 24860 28035 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17771000 957 2692 917 1736 1424 1424 1 9606 Homo sapiens 0.039038221204918955 AGATSEGVLANFFNSLLSK Unmodified 1924.9894 0.9894419 4757 Q9Y6G9;B3KM42;E9PHI6 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 0 0 0 5 0 1 67.045 67.088 3 2.4786E-07 20996 20230619_1885_Aki_TMTPro18x_K_F5 108.49 91 7869.3 7829.2 7255.8 9177 7736.5 9580.8 8225.7 9287.6 8606.8 12300 9012.5 7512.3 11691 8134.1 8408.2 12407 11979 14758 7281.6 7174.7 7441.7 9161 8020.1 9650.1 8281.7 9582.9 8788.6 12118 9332.2 7870.7 11682 8615.5 8827.6 12514 11446 13982 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7493000 958 4757 918 1737 1425 1425 1 9606 Homo sapiens 0.06394675552678564 AGAVSALAK Unmodified 786.45995 0.45995289 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 1.5 0.5 1 1 45.303 45.344 3 0.0038607 12277 20230619_1881_Aki_TMTPro18x_K_F2 78.516 37.068 46159 36742 40039 47007 48112 57262 52647 49773 70403 30234 28307 23498 26538 25653 35197 28116 32007 26185 42628 33726 41356 46745 49534 56932 53316 50852 68909 31493 30933 24268 27595 26512 35420 28134 30615 24913 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36582000 959 4753 919 1738;1739 1426 1426 1 9606 Homo sapiens 0.05818130697275592 AGAYDFPSPEWDTVTPEAK Unmodified 2079.9426 0.94255129 1836 E9PBG7;Q13557-6;A0A994J5B0;D6R938;A0A8V8TNA7;A0A8V8TN65;A0A8V8TND4;Q13557-10;Q13557-8;E9PF82;Q13557-11;Q13557;B7Z2B0;A0A8V8TPK3;Q13557-3;A0A8V8TN88;A0A994J516;A0A8V8TN60;A0A8V8TPY4;A0A8V8TPJ8;A0A8V8TNA1;A0A994J7X8;Q13557-12;Q13557-5;Q13557-9;Q13557-4;A0A8V8TPM4;Q4G1A8;A0A8V8TNN9;H0Y9C2;A8K161;A0A5F9ZHR5;A0A5F9ZH50;D6RFJ0;A0A5K1VW76;A0A5F9ZHY2;A0A804HIC9;Q9UQM7;Q9UQM7-2;Q8IWE0;Q7LDD5;A0A5F9ZH21;A0A5F9ZHM9 CAMK2D;CAMK2A Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit alpha no no 0 0 0 4.5 1.12 1 1 1 1 61.758 61.792 3 0.058399 19164 20230619_1882_Aki_TMTPro18x_K_F3 40.432 33.32 27760 27429 27941 31726 27451 26121 30749 28994 32343 29789 31545 29859 33616 26917 31867 32127 34738 40958 25703 25133 28379 31621 28602 26926 30865 29462 32824 30066 32487 30221 34151 28165 32597 32691 33252 38786 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237130000 960 1836 920 1740;1741;1742;1743 1427 1427 1 9606 Homo sapiens -0.05422228789120709 AGCSNIAYPR Unmodified 1107.5131 0.51312744 3648 P53794 SLC5A3 Sodium/myo-inositol cotransporter yes yes 0 0 0 8 0 1 38.004 37.99 2 0.0004298 8674 20230619_1888_Aki_TMTPro18x_K_F8 126.07 102.51 35162 30211 36378 32099 26805 26915 29649 34185 39126 50188 50081 42958 54922 39145 35656 61552 59576 45607 32533 27674 36672 32233 28669 27805 30068 34831 39811 49617 50997 43858 54953 41707 38055 60521 56674 43538 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21179000 961 3648 921 1744 1428 1428 1 9606 Homo sapiens -0.03632859582398851 AGDADLQVR Unmodified 943.47231 0.47230849 3058 H0YN65;Q8NCH0 CHST14 Carbohydrate sulfotransferase 14 yes no 0 0 0 2 0 1 37.492 37.553 2 0.00017548 8717 20230619_1881_Aki_TMTPro18x_K_F2 145.16 118.98 33016 17884 31964 32846 38137 43976 38015 33439 50739 39132 47208 47762 49237 39944 37343 32174 54241 52153 30456 16520 32660 32054 39160 43352 38713 35056 50786 39544 48674 47796 49623 41089 39081 33595 51719 49331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35124000 962 3058 922 1745 1429 1429 1 9606 Homo sapiens -0.001688776303353734 AGDAFGDTSFLNSK Unmodified 1428.6521 0.65212334 2234 B2R6D8;Q9H3Q1-2;Q9H3Q1;J3QQS6;J3KRZ9 CDC42EP4 Cdc42 effector protein 4 yes no 0 0 0 6 0 1 57.674 57.743 3 1.0859E-05 17200 20230619_1886_Aki_TMTPro18x_K_F6 117.07 93.846 86867 77152 87798 92682 89651 86145 108650 95112 120590 99161 111630 111560 114350 103880 113250 127540 132720 137180 80374 70746 89166 92265 93372 87862 108780 96719 121730 100420 115100 112490 116640 108640 116330 128280 126830 130180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223060000 963 2234 923 1746 1430 1430 1 9606 Homo sapiens -0.045056632038722455 AGDDEPEYEDGR Unmodified 1351.5164 0.51641772 4759 Q9Y6K1;Q59HC6;A0A0C4DG02;F8WE91;Q9Y6K1-2;A0A8I5KXG9 DNMT3A DNA (cytosine-5)-methyltransferase 3A yes no 0 0 0 1 0 1 35.059 35.059 2 2.2643E-17 7992 20230619_1880_Aki_TMTPro18x_K_F1 224.75 212.91 65023 35821 57283 68202 58464 74403 69745 61503 81821 75481 99688 101820 98922 85615 77456 62177 107750 109240 59943 33104 58934 66216 61045 74393 70034 64151 83317 76365 101390 101540 99982 87664 80719 65552 102820 103250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82621000 964 4759 924 1747 1431 1431 1 9606 Homo sapiens -0.14527982785330096 AGDEFVEK Unmodified 893.41306 0.41306227 1026 Q16836-2;Q16836-3;Q16836;E9PF18;A0A0D9SFP2;B3KTT6;A0A140VK76;B2RB06;A0A0A0MSE2;A0A804HKJ2;A0A1W2PQV5;A0A804HJW7;A0A1W2PRT2;A0A1W2PQC2;A0A804HJK7;A0A1W2PP40;A0A1W2PQ55 HADH Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes no 0 0 0 2 0.816 1 1 1 45.191 45.243 2 0.0043444 12405 20230619_1880_Aki_TMTPro18x_K_F1 116.73 72.087 386670 278750 381850 399180 513380 515000 491280 485580 622310 450460 625420 572620 548230 516740 502120 438900 676990 615040 357240 256280 390360 394620 522030 511280 500570 497130 625810 461250 637690 573990 560280 530740 520650 452440 645620 582530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 479770000 965 1026 925 1748;1749;1750 1432;1433 1432 2 9606 Homo sapiens -0.03790773644516321 AGDEIDEPSER Unmodified 1216.5208 0.52077482 3013 G3XAG1;Q96ME7-3;Q96ME7;B4DES6;B7Z9P6;Q96ME7-2;B4E0X7 ZNF512 Zinc finger protein 512 yes no 0 0 0 1 0 1 35.999 35.999 2 2.0616E-17 8319 20230619_1880_Aki_TMTPro18x_K_F1 240.13 206.21 51394 32912 51426 67752 72931 82231 75916 75367 96080 57755 79960 94009 84873 78794 80991 49190 94488 106870 47459 30430 52677 65653 74169 81817 76948 77021 95941 60493 83113 93184 86340 80254 82988 53242 90361 100850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152130000 966 3013 926 1751 1434 1434 1 9606 Homo sapiens -0.07882473571771698 AGDFLENHYR Unmodified 1220.5574 0.5574351 2796 CON__Q2UVX4 yes yes 0 0 0 4.5 0.5 1 1 42.951 43.013 3 1.3545E-05 10864 20230619_1883_Aki_TMTPro18x_K_F4 145.99 119.94 + 49176 41378 52324 58021 74617 93799 66431 72157 97867 60837 64247 72502 68943 59215 76174 59767 61722 77355 45504 38011 53280 57650 75663 91576 68396 74868 96483 62538 67779 72587 70558 61569 76448 61092 59303 73229 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70518000 967 2796 927 1752;1753 1435 1435 1 -0.04402132164523209 AGDGDGWVSLAELR Unmodified 1444.6947 0.69465686 3193 Q96D15;M0QZH0;M0QYB8 RCN3 Reticulocalbin-3 yes no 0 0 0 4 0 1 61.275 61.279 2 0.00013233 18868 20230619_1883_Aki_TMTPro18x_K_F4 105.36 81.635 39163 36836 38322 35184 33519 45555 41265 39706 47527 43681 49262 44447 46488 40810 45385 49016 44285 47752 36240 33703 38920 35836 35479 45145 41359 41070 48108 43972 50309 44992 47484 42643 46132 49047 42407 45356 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25812000 968 3193 928 1754 1436 1436 1 9606 Homo sapiens -0.009902680756113114 AGDLLEDSPK Unmodified 1043.5135 0.5135046 2314 B2RDE8;A0A384NPW1;P51858;A8K8G0;B7Z958;B7Z525;P51858-2;P51858-3 HDGF Hepatoma-derived growth factor yes no 0 0 0 2.5 0.5 2 2 49.883 49.95 2;3 1.1963E-05 14099 20230619_1882_Aki_TMTPro18x_K_F3 187.22 138.42 223160 180850 201910 244180 263420 273530 247080 238140 287350 259490 316510 318550 319050 260010 266210 333680 344110 321230 206170 166090 208030 241650 268270 273570 251300 246390 291520 262970 323430 318860 323010 274010 276300 333240 328330 305320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 640200000 969 2314 929 1755;1756;1757;1758 1437;1438 1438 2 9606 Homo sapiens -0.006511613815291639 AGDLVFAK Unmodified 819.44905 0.44905385 182 A0A024R216;Q9Y3E1;H3BPQ6 HDGFRP3 Hepatoma-derived growth factor-related protein 3 yes no 0 0 0 7.5 0.5 1 1 53.106 53.179 2 0.0049534 14998 20230619_1887_Aki_TMTPro18x_K_F7 114.93 38.033 200550 167740 172350 189940 176690 199990 198380 208310 245320 211180 219610 232490 237930 202920 214290 246360 249660 240570 185250 153760 177610 190190 183950 201690 200240 212300 246160 213970 227410 234070 241180 212560 220450 246470 238460 228590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 307270000 970 182 930 1759;1760 1439 1439 1 9606 Homo sapiens 0.032107283229947825 AGDMENAENILTVMR Oxidation (M) 1678.7655 0.76545532 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 1 0 3.33 0.471 2 1 55.428 55.459 2 2.076E-07 16830 20230619_1882_Aki_TMTPro18x_K_F3 133.88 122.24 88361 71584 83470 96815 84799 89916 91450 95158 94044 106810 110030 108660 110190 91039 115780 120090 111450 128550 81662 65742 85292 95589 88123 91567 91949 97174 96365 107330 112170 109650 112680 96059 117430 120670 106800 121940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 144740000 971 1723 931 1761;1762;1763 1440;1441;1442 1441 1123;1124 3 9606 Homo sapiens -0.04677679144674585 AGDMENAENILTVMR Unmodified 1662.7705 0.7705407 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 3 0 1 61.449 61.479 2 7.852500000000001E-20 19007 20230619_1882_Aki_TMTPro18x_K_F3 194.98 167.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 972 1723 931 1764 1443 1443 1 9606 Homo sapiens -0.03433375282043016 AGDPLDLVALAEQVQK Unmodified 1665.8938 0.8937506 4446 Q9BV19 C1orf50 Uncharacterized protein C1orf50 yes yes 0 0 0 6 0 1 64.735 64.779 3 0.0061255 20269 20230619_1886_Aki_TMTPro18x_K_F6 67.415 50.047 34671 25931 29767 30771 25318 29740 30908 31604 37216 38799 33973 37511 41401 38605 38141 41538 43512 49280 32005 23790 30586 30675 26835 30196 31044 32350 37455 38790 35363 38161 41895 39944 39157 42118 41620 46703 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59697000 973 4446 932 1765 1444 1444 1 9606 Homo sapiens 0.08743947432390087 AGDRQPEWLEEQQGR Unmodified 1797.8394 0.83942362 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 2 0 1 40.551 40.625 3 4.9214E-11 10077 20230619_1881_Aki_TMTPro18x_K_F2 165.49 152.86 158610 152860 145800 131560 167040 154370 150230 160440 159410 165320 172520 151100 177480 165690 158490 169320 152040 151550 146720 139740 149350 135120 171170 154730 152830 163540 162500 166380 176460 154630 180140 170550 161200 169110 145530 144140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219360000 974 349;3906 933 1766 1445 1445 1 9606 Homo sapiens -0.02758251666432443 AGDTHCPAEPLAR Acetyl (Protein N-term) 1435.6514 0.65141184 1139 H3BM39;H3BR76;A0A0S2Z5P4;A0A0S2Z5P8;A0A0S2Z5T1;Q8N371-2;Q8N371 KDM8 Lysine-specific demethylase 8 yes no 1 0 0 1 0 1 34.39 34.39 2 1.9071E-05 7736 20230619_1880_Aki_TMTPro18x_K_F1 63.694 39.062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 975 1139 934 1767 1446 1446 1 9606 Homo sapiens -0.0489878112457518 AGDTLSGTCLLIANK Unmodified 1532.7868 0.78684269 4198 Q86X55-1;Q86X55 CARM1 Histone-arginine methyltransferase CARM1 yes no 0 0 0 8 0 1 57.818 57.869 3 0.0074661 17032 20230619_1888_Aki_TMTPro18x_K_F8 67.019 45.146 79523 61608 75089 74973 60752 70983 69082 68228 78065 87533 92530 93751 94093 82178 83865 107220 96589 105810 73474 56528 76423 74582 64513 72024 69503 70434 79637 87603 94325 94524 95515 86460 86297 107190 92356 100480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334530000 976 4198 935 1768 1447 1447 1 9606 Homo sapiens 0.041760739464052676 AGDTVIPLYIPQCGECK Unmodified 1919.9121 0.91211956 3436 Q6IRT1;Q6FI45;P11766;Q5U043;Q2VIM7;D6RFE4 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 yes no 0 0 0 7 0 1 61.387 61.426 3 2.1332E-13 18389 20230619_1887_Aki_TMTPro18x_K_F7 150.39 130.81 167800 135410 171240 188150 193950 268490 180550 205280 303330 211070 208340 243430 242710 211240 213670 228590 244220 232150 155180 124400 174160 186600 199980 263730 186600 214140 298070 214270 219920 244440 245340 219840 219540 229630 233290 220510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1672599999.9999998 977 3436 936 1769 1448 1448 1 9606 Homo sapiens -0.0110400197954732 AGEEGSIR Unmodified 817.393 0.39299553 891 Q9BY67-3;Q9BY67-4;X5D7A8;Q9BY67;Q9BY67-5;X5DNF2;X5DQR8;X5DQS5;X5D8W0;A0A087X1W8;A0A0A0MTJ8;Q6MZK6;A0A4Z1;A0A087X0T8;H1ZZW4 CADM1;DKFZp686F1789 Cell adhesion molecule 1 yes no 0 0 0 1 0 1 29.965 29.965 2 0.0029193 5992 20230619_1880_Aki_TMTPro18x_K_F1 120.92 65.48 14020 7359.4 20191 23873 34383 29207 20787 30522 20853 11915 20865 21266 14316 14984 16072 9738.5 20802 16504 12982 6876.7 20218 22784 34138 29141 21781 30569 21212 13320 21127 20955 14925 15375 16536 10274 19827 15620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16863000 978 891 937 1770 1449 1449 1 9606 Homo sapiens -0.023005245844842648 AGEELLK Unmodified 758.41742 0.41741937 1004 A0A0C4DGG1;B4DUI2;D3DQR0;Q9UKS6 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes no 0 0 0 3 0.816 1 1 1 45.311 45.379 2 0.075426 11996 20230619_1882_Aki_TMTPro18x_K_F3 74.743 16.165 2241900 1269500 2340400 2648100 3153400 3337100 2464000 2721000 3241900 2472300 3307100 3911200 2756300 3120300 2526500 1933600 4296300 4118400 2069800 1174800 2382800 2566500 3192700 3305800 2549500 2815900 3258100 2557400 3369300 3873700 2826800 3180900 2667100 2086700 4092300 3889200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2959599999.9999995 979 1004 938 1771;1772;1773 1450;1451 1450 2 9606 Homo sapiens 0.028547355690420773 AGEGNEEISNMIHSYIK Oxidation (M) 1906.8731 0.87309151 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 1 0 5 0 1 51.024 51.099 3 0.001657 14223 20230619_1885_Aki_TMTPro18x_K_F5 64.52 46.156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 980 4170 939 1774 1452 1452 2684 1 9606 Homo sapiens -0.044070110095617565 AGELTEDEVER Unmodified 1246.5677 0.56772501 3710 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 0 1 0 1 40.853 40.853 2 6.9303E-12 10460 20230619_1880_Aki_TMTPro18x_K_F1 201.61 176.23 164630 155560 161080 198540 207930 237750 209950 202600 263810 188180 211730 188650 219850 174080 296170 202530 210390 183990 152350 142700 164890 197390 212470 236590 213130 209050 263390 191170 220070 191130 227590 181580 294560 202360 201950 175050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 250060000 981 3710 940 1775 1453 1453 1 9606 Homo sapiens -0.04569614020624613 AGEQDATIHLK Unmodified 1181.6041 0.60405094 806;3082 P13591-1;A0A087WTF6;P13591;P13591-3;P13591-4;A0A087WV75;A0A087WWD4;A0A087WX77;A0A087WTE4;P13591-5;P13591-6;H7BYX6 NCAM1 Neural cell adhesion molecule 1 no no 0 0 0 4 0 1 41.506 41.549 3 9.631E-05 10194 20230619_1883_Aki_TMTPro18x_K_F4 120.14 94.919 92911 78588 94718 136160 114920 120980 131530 139480 155300 120690 144320 145790 143270 125250 130510 144620 153400 141760 85945 72386 96637 132440 118170 123830 132360 140740 156270 123770 148550 146220 145700 130860 134270 144830 146470 134720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239390000 982 806;3082 941 1776 1454 1454 1 9606 Homo sapiens 0.02051307666761204 AGERPELCR Unmodified 1086.524 0.52402648 3477 P19174;P19174-2;Q4LE43 PLCG1;PLCG1 variant protein 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1;Phosphoinositide phospholipase C yes no 0 0 1 3.5 0.5 1 1 30.231 30.311 3 0.00019925 5721 20230619_1882_Aki_TMTPro18x_K_F3 122.26 78.95 148670 97713 122350 123750 134140 134060 124950 137590 164980 174500 176240 175040 190490 154680 149440 186450 222240 181660 137100 89755 126620 123000 138190 134900 127830 141250 166360 174370 180840 176980 192040 161940 156890 186480 211650 172740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 121110000 983 3477 942 1777;1778 1455;1456 1455 2 9606 Homo sapiens -0.015774572080772487 AGEVFIHK Unmodified 899.4865 0.48650199 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;H7C367;C9JYS8;C9IZL7;A0A0S2Z4E7;A0A7I2YQK8 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 7 0.816 1 1 1 43.951 44.015 3 0.00098895 11092 20230619_1888_Aki_TMTPro18x_K_F8 111.04 48.838 1678700 1307800 1471700 1620300 1828700 1908200 1904600 1837400 2235000 1920900 2040700 1951800 2241900 1777400 1777600 2360600 2109300 2069600 1550200 1200100 1518500 1614400 1873200 1906400 1925600 1884200 2249800 1938600 2110600 1975500 2259100 1870200 1837300 2344800 2014700 1968900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4867800000 984 1112 943 1779;1780;1781 1457;1458;1459;1460 1460 4 9606 Homo sapiens 0.032738195886281574 AGFAELGLSSWLVEQCR Acetyl (Protein N-term) 1963.9462 0.94619688 2103 A8K7A1;Q9Y6V7;Q9NVY6;M0QXD4;M0R1S3;M0QZC0;M0R0K1 DDX49 Probable ATP-dependent RNA helicase DDX49 yes no 1 0 0 6.5 0.5 1 1 68.276 68.308 2 7.405600000000001E-30 21431 20230619_1887_Aki_TMTPro18x_K_F7 171.05 139.98 1167.3 0 0 724.1 1103 0 1006.4 1255.5 1183.7 0 1892.4 959.35 0 0 0 0 0 2211.2 1063.7 0 0 659.11 1025.4 0 921.56 1157.8 1158.2 0 1816.6 902.47 0 0 0 0 0 2068.7 1 0 0 1 1 0 1 1 1 0 1 1 0 0 0 0 0 2 5285200 985 2103 944 1782;1783 1461;1462 1462 2 9606 Homo sapiens 0.0027816250374144147 AGFAGDDAPR Unmodified 975.44101 0.44100836 3112;3679;2695;3167;4132 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;A6NL76;B3KW67;Q7Z7J6;Q13707;P63267-2;B7Z6I1;F6QUT6;F6UVQ4;C9JFL5;B8ZZJ2;F8WB63;F8WCH0;P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;I3L3I0;I3L1U9;J3KT65;I3L3R2;A1E282;L0R5C4;A0A7P0TBL1;K7EM38;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;B3KUD3;A0A2R8YGF8;A0A6Q8PH58;G5E9R0;C9JZR7;C9JUM1;C9JTX5;A0A6Q8PGD7;Q6S8J3;A5A3E0;P0CG38;P0CG39 ACTA1;ACTC1;ACTA2;ACTG2;ACTG1;POTEM;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;POTEJ Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J no no 0 0 0 4.5 2.29 1 1 1 1 1 1 1 1 37.298 37.344 2 1.2313E-09 8580 20230619_1881_Aki_TMTPro18x_K_F2 208.37 138.37 2373000 1779800 1843200 2185000 2939800 3185500 2390000 3399700 2179700 2830300 2745000 3197700 2507100 3341200 1523000 3754300 1417800 2617300 2189000 1633400 1934800 2186500 2952200 3149600 2438000 3438500 2259300 2899900 2781100 3235200 2526800 3455500 1573600 3696600 1351600 2493600 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 8 9 76815000000 986 2695;3112;3167;3679;4132 945 1784;1785;1786;1787;1788;1789;1790;1791 1463;1464;1465;1466;1467;1468;1469;1470;1471 1464 9 9606 Homo sapiens -0.04769450664434771 AGFAGDQIPK Unmodified 1002.5134 0.51344502 1483;3577 A0A384NQ21;P61163;R4GMT0;B4DM97;A0A1B0GVS3;P42025 ACTR1A;ACTR1B Alpha-centractin;Beta-centractin no no 0 0 0 6.5 0.5 1 1 48.062 48.145 2 0.00034054 12699 20230619_1887_Aki_TMTPro18x_K_F7 130.66 83.081 349500 295830 303390 348530 330870 374410 366000 351640 423190 425530 462350 458700 485900 393890 392090 512490 511480 483510 322890 271260 312740 347980 342690 376170 368750 362860 429490 427120 473420 462120 490670 414740 407600 511120 488030 459650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 365070000 987 1483;3577 946 1792;1793 1472;1473 1473 2 9606 Homo sapiens 0.012288834091464196 AGFAQPSGLSLASEDPWSCLFVADSESSTVR Unmodified 3270.5139 0.51392189 4242 Q8NBF2;Q7Z658;Q8NBF2-2 NHLRC2;DKFZp779F115 NHL repeat-containing protein 2 yes no 0 0 0 7 0 1 65.21 65.237 3 1.1511E-15 20210 20230619_1887_Aki_TMTPro18x_K_F7 139.72 126.67 5158.7 2951.5 2719.4 3203.3 3360.6 2585.7 3084.3 3231.9 4538.4 3792 3263 3609.9 4520 4214.3 5108.4 4123.7 3825.4 6732.2 4742.5 2709 2975.5 3208.2 3433.3 2681 3170 3272.2 4491.7 3799.4 3467.6 3692.1 4602.8 4326.3 5108.9 4293.5 3692.7 6356 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23362000 988 4242 947 1794 1474 1474 1 9606 Homo sapiens -0.030514515169215883 AGFEASDPR Unmodified 948.43011 0.43010932 3824 Q12962;A0A087WWP5 TAF10 Transcription initiation factor TFIID subunit 10 yes no 0 0 0 2.5 0.5 1 1 36.891 36.947 2 0.012718 8364 20230619_1882_Aki_TMTPro18x_K_F3 80.229 30.882 52375 21945 40914 45115 48516 43753 44260 42288 72372 54677 59201 54995 64398 52245 44853 67488 70180 59666 48195 20340 42635 43598 49689 44305 45725 43648 71565 54661 61518 55761 64648 54789 47472 67069 66830 56793 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48627000 989 3824 948 1795;1796 1475 1475 1 9606 Homo sapiens -0.046168530387149076 AGFESER Unmodified 794.35588 0.35588174 475 E5RG23;Q86V65;A0A024R7W6;A0A024R801;Q13946-3;Q13946-2;Q13946 PDE7A;PDE7 High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A yes no 0 0 0 1.5 0.5 1 1 32.064 32.094 2 0.013968 6800 20230619_1880_Aki_TMTPro18x_K_F1 113.25 65.137 54870 26271 71599 70853 93030 96962 72135 88630 75018 48576 84948 99947 72053 71956 86711 30614 98713 80009 50734 24454 71644 68143 94279 95781 74112 90018 76532 52812 86263 98077 74717 72945 88248 34397 94203 75538 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98603000 990 475 949 1797;1798 1476 1476 1 9606 Homo sapiens -0.049521961302275486 AGFFLPPDEYVVTDPEQEK Unmodified 2180.0314 0.031366293 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;A0A1U9XBD9;A0A1U9XBC3;Q14676-3;B4DYH4;Q14676-4 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 0 3.5 0.5 1 1 63.207 63.225 3 0.068001 19711 20230619_1883_Aki_TMTPro18x_K_F4 38.577 28.789 22053 16356 22144 23067 20201 22863 21499 23300 20360 24099 26499 26120 27934 24640 25562 28211 30903 28900 20381 15034 22462 22738 21169 23138 21588 23794 21067 24364 26962 26384 28360 25651 26342 28324 29503 27449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66607000 991 1308 950 1799;1800 1477 1477 1 9606 Homo sapiens -0.01144813549490209 AGFGAMEK Acetyl (Protein N-term) 851.38474 0.38473903 3226 O14929;F8W9G7;F8WEW1 HAT1 Histone acetyltransferase type B catalytic subunit yes no 1 0 0 3 0 1 53.5 53.553 2 0.012737 15741 20230619_1882_Aki_TMTPro18x_K_F3 54.611 36.845 81711 53886 65041 79733 72565 94815 83146 88524 96705 89473 85591 84789 94599 79037 72686 96719 97760 90732 75337 49583 67683 78543 75237 94511 83636 90868 97315 90250 88705 86114 95241 82659 75811 96507 93245 86267 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110030000 992 3226 951 1801 1478 1478 1 9606 Homo sapiens -0.04689794825446825 AGFLYTGEGDTVR Unmodified 1384.6623 0.6622941 2274 P98170;B2R9R2;B1AKU2 XIAP E3 ubiquitin-protein ligase XIAP yes no 0 0 0 4 0 1 51.192 51.22 2 0.025573 14540 20230619_1883_Aki_TMTPro18x_K_F4 76.332 55.43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 993 2274 952 1802 1479 1479 1 9606 Homo sapiens -0.014650554786157954 AGFRPVEAGGQHGGR Unmodified 1494.744 0.74400709 170 B4DKR6;A0A024R1X0;O15234 CASC3 Protein CASC3 yes no 0 0 1 4.5 3.5 1 1 29.789 29.799 4 3.5627E-19 5578 20230619_1888_Aki_TMTPro18x_K_F8 173.71 152.65 84918 52573 85173 91897 105810 108700 94591 122870 108960 86505 124250 127820 98212 91783 96931 76494 129490 112620 78404 48494 86836 89751 107920 108900 96565 123490 110660 90595 125640 126630 101080 95039 100260 79220 123460 106650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57428000 994 170 953 1803;1804 1480;1481 1481 2 9606 Homo sapiens 0.01642484723834059 AGFSSTSYR Unmodified 974.44576 0.44575938 2433 B3KWQ6;P41219;P41219-2 PRPH Peripherin yes no 0 0 0 5.33 3.09 1 1 1 37.797 37.813 2 2.949E-14 9109 20230619_1880_Aki_TMTPro18x_K_F1 242.87 212.16 1221800 991230 937760 874770 1125400 1502400 1070100 1074300 1795600 212930 175820 174990 169760 158270 668880 240350 289300 174680 1127500 906860 978920 901890 1157000 1461500 1103200 1103700 1718400 263870 257210 179690 197860 168010 648000 237920 279670 167030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1113000000 995 2433 954 1805;1806;1807 1482;1483;1484 1482 3 9606 Homo sapiens -0.04248566521664543 AGGAARPVSLR Unmodified 1053.6043 0.60432571 4133 Q6SPF0;E9PIW9 SAMD1 Atherin yes no 0 0 1 3.5 0.5 1 1 31.114 31.188 3 0.0070892 5988 20230619_1883_Aki_TMTPro18x_K_F4 71.066 49.978 81926 69028 71062 83384 102220 100800 92587 101140 111600 73138 100180 93218 91909 73398 84140 81869 120670 74604 75686 63312 73621 83254 103410 100640 94494 102520 112010 76076 102900 93115 93711 76801 87676 81756 114780 71105 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47640000 996 4133 955 1808;1809 1485;1486 1486 2 9606 Homo sapiens 0.07966772177269377 AGGAAVVITEPEHTK Unmodified 1478.7729 0.77290718 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 4.5 0.5 1 1 42.333 42.396 3 2.7522E-25 10554 20230619_1883_Aki_TMTPro18x_K_F4 227.42 184.14 644340 532980 604140 611030 649690 702300 669190 682990 758620 721870 807020 722000 831250 669060 719290 866600 832470 740910 595530 488630 617740 612070 671800 702960 676560 700000 769650 727560 826120 731840 842080 702330 740420 860270 794770 705390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2420500000 997 617 956 1810;1811 1487;1488 1487 2 9606 Homo sapiens 0.052671645096097564 AGGAFDPYTLVR Unmodified 1265.6404 0.64043645 2667 B5MCD7;O43759-2;O43759;A2A283;F8WCE4 SYNGR1 Synaptogyrin-1 yes no 0 0 0 1 0 1 57.215 57.215 2 6.6877E-14 17308 20230619_1880_Aki_TMTPro18x_K_F1 217.66 192.41 71111 62910 66782 71096 50215 62186 69555 73419 76458 83632 87300 79759 83461 76243 92312 94515 95958 100600 65755 57653 67985 71048 54052 63822 69267 74501 77944 83831 88870 81076 85760 79726 93929 95016 91809 95469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68544000 998 2667 957 1812 1489 1489 1 9606 Homo sapiens 0.01824184563452036 AGGAISELL Unmodified 829.45453 0.45453316 3927 Q15291-2 RBBP5 Retinoblastoma-binding protein 5 yes yes 0 0 0 3.5 0.5 1 1 62.84 62.858 2 0.0027299 19562 20230619_1883_Aki_TMTPro18x_K_F4 103.71 92.344 14896 11158 11526 11921 15362 15586 14520 15195 15238 13472 17255 18883 18103 14612 15805 18417 19123 19790 13741 10227 12047 12031 15627 15480 14714 15501 15558 13871 17656 18784 18337 15415 16310 18515 18269 18779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32687000 999 3927 958 1813;1814 1490 1490 1 9606 Homo sapiens 0.03298407114800739 AGGANYDAQTE Unmodified 1095.4469 0.4468816 1447 Q14019;A0A384MTY2;H3BT58 COTL1 Coactosin-like protein yes no 0 0 0 1 0 1 36.943 36.943 2 0.00094186 8780 20230619_1880_Aki_TMTPro18x_K_F1 105.57 89.235 12903 8492.5 13153 12512 18255 22855 16970 21515 23437 16685 23564 27417 23069 22102 19982 15399 27483 28387 11919 7814 13419 12438 18556 22276 17392 21920 23484 17457 24170 27143 23436 22621 20760 16327 26229 26821 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65047000 1000 1447 959 1815 1491 1491 1 9606 Homo sapiens -0.09702396943430358 AGGASPAASSTAQPPTQHR Unmodified 1790.866 0.86597272 2305 B2RCD8;Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes no 0 0 0 7 0 1 23.163 23.262 3 1.418E-08 3775 20230619_1887_Aki_TMTPro18x_K_F7 120.63 104.23 2861.7 990.31 1316.7 1302 1117 821.77 2228.1 1304.3 3951.8 825.83 1535.2 2361.5 2060.5 2886.9 731.83 2427.1 1494.5 2356.3 2624.8 900.03 1343.7 1189.8 1170.9 750.46 2229.3 1209.6 3818.6 793.83 1616.3 2345.7 2032.8 2929.3 796.17 2438 1428.5 2222.8 2 1 1 1 1 1 2 1 2 1 1 2 2 2 1 2 1 1 5183100 1001 2305 960 1816 1492;1493 1492 2 9606 Homo sapiens 0.0021743722486462502 AGGDAEPRPAEPPAWAGGAR Unmodified 1931.9238 0.92382195 1871 A0A994J4Y8;Q96HS1-2;Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 0 0 1 4 0.816 1 1 1 41.19 41.253 3 3.8647E-16 10036 20230619_1883_Aki_TMTPro18x_K_F4 159.04 133.8 43014 40833 47239 48930 48142 48427 50720 54255 52632 58225 61812 54034 66438 50253 55601 61036 60680 55200 39846 37433 47654 48759 49945 49161 51081 55117 53910 58482 63130 54953 67095 52558 57037 60826 57971 52511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290780000 1002 1871 961 1817;1818;1819 1494 1494 1 9606 Homo sapiens -0.004863008496840848 AGGEAGVTLGQPHLSR Acetyl (Protein N-term) 1590.8114 0.81141795 3571 P41091;Q2VIR3;Q2VIR3-2 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 1 0 0 7 0 1 43.518 43.597 2 2.3979000000000003E-77 10742 20230619_1887_Aki_TMTPro18x_K_F7 228.83 216.31 3059 2281.2 3222.5 4034.3 3102.6 4850.9 4898.1 3154.4 5254.1 3940.5 5255.6 4860.9 3802.2 4530.8 3035.3 6159.6 4327.1 4280.9 2828.2 2102.8 3266.5 3934.9 3290.3 4798 4839.6 3367.6 5322.5 3974.3 5324.1 4888 3900.6 4760.2 3189.2 6049.7 4127.3 4086.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32186000 1003 3571 962 1820 1495 1495 1 9606 Homo sapiens 0.03964470144137522 AGGEELDEGVAK Unmodified 1173.5513 0.55134667 1030 A0A0F7NGI8;Q32MZ4-3;Q32MZ4-2;Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes no 0 0 0 1 0 1 44.084 44.084 3 1.3642E-07 11914 20230619_1880_Aki_TMTPro18x_K_F1 145.46 125.69 41015 30585 32630 35693 52090 50583 43253 39841 58530 37234 38784 39343 40899 34508 39307 35746 49969 40198 37841 28056 34147 35816 52324 49795 44558 41377 57927 37893 40819 39674 41620 35830 40560 36167 47640 38169 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52541000 1004 1030 963 1821 1496 1496 1 9606 Homo sapiens -0.02848695186708028 AGGEPSVESGR Unmodified 1044.4836 0.48360145 1284 A0A1C7CYX9;Q59GB4;A9CQZ4 DPYSL2 yes no 0 0 0 1.5 0.5 1 1 31.208 31.241 2 0.0028162 6472 20230619_1880_Aki_TMTPro18x_K_F1 92.838 78.164 18796 10274 23898 23834 22245 23377 17511 21470 18851 20210 24834 26816 27664 22656 25130 13135 29849 20802 17383 9527.4 23818 22925 23088 23609 18009 22033 19380 20687 25337 26750 28016 23015 25785 13829 28451 19709 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12401000 1005 1284 964 1822;1823 1497;1498 1497 2 9606 Homo sapiens -0.036861003268541026 AGGFLMK Oxidation (M) 738.37345 0.37344606 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DWQ3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 1 0 2 0.816 1 1 1 47.738 47.788 2 0.088562 13396 20230619_1881_Aki_TMTPro18x_K_F2 68.033 44.238 1164500 965960 951010 1055700 1356200 1301900 1236700 1143300 1416900 939770 1034200 972020 1042400 910720 1061600 1320300 1239400 1109700 1075300 885180 990330 1062100 1372600 1294900 1258700 1173700 1416700 962800 1079300 984670 1065200 962640 1090400 1307700 1183200 1056700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1365500000 1006 3374 965 1824;1825;1826 1499 1499 1975 1 9606 Homo sapiens -0.006205721289347821 AGGFLMK Unmodified 722.37853 0.37853144 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DWQ3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 2.5 0.5 1 1 51.849 51.901 2 0.016485 14981 20230619_1882_Aki_TMTPro18x_K_F3 109.88 71.228 3029700 2555100 2751600 2831500 2809600 3605000 3026200 2951000 3385800 2685400 2630500 2794800 3009600 2425900 2730400 3488400 3425400 3371400 2799900 2341600 2820200 2847400 2924600 3571000 3049700 3053000 3397700 2733300 2752500 2821300 3046800 2571200 2823900 3479200 3270300 3203600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 911220000 1007 3374 965 1827;1828 1500;1501 1501 2 9606 Homo sapiens 0.006237317336740489 AGGGRPSSPSPSVVSEK Unmodified 1597.806 0.80599822 2947 Q9ULU8-4;F1T0E5;Q9ULU8-2;Q9ULU8-3;Q9ULU8;Q9ULU8-5 CADPS Calcium-dependent secretion activator 1 yes no 0 0 1 8 0 1 37.002 36.987 3 0.078793 8257 20230619_1888_Aki_TMTPro18x_K_F8 41.412 22.089 6748.8 4978.5 5765.6 10350 10149 11383 7039.7 11684 11656 6192.4 13653 30142 14291 20070 41962 9628.1 19856 25950 6229 4600.9 6031.1 10007 10126 11426 7431.3 11772 11666 7280.6 14111 29103 15912 20449 40784 10864 19254 24452 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8181000 1008 2947 966 1829 1502 1502 1 9606 Homo sapiens 0.031007465616539776 AGGHHNDLEDVGR Unmodified 1375.6229 0.6228889 4042 Q5JTZ9 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 0 0 0 1.5 0.5 1 1 28.625 28.662 4 7.656E-06 5517 20230619_1880_Aki_TMTPro18x_K_F1 125.54 84.953 15208 8992.2 13770 15314 15805 15134 15667 21132 18493 18623 24233 20922 23158 20900 20608 17003 30159 23118 14027 8293.5 14144 14941 16241 15449 15911 21088 18902 19016 24519 21143 23563 21358 21503 17507 28714 21918 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29336000 1009 4042 967 1830;1831 1503 1503 1 9606 Homo sapiens -0.049897627095106145 AGGIETIANEFSDR Unmodified 1478.7001 0.70013617 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;R4GN69 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 3.2 0.748 1 2 2 58.215 58.231 2;3 1.7121E-21 17679 20230619_1882_Aki_TMTPro18x_K_F3 246.56 228.25 255940 202160 237230 269820 228620 303030 277720 277220 413720 321010 302760 303490 380190 297180 308760 411870 353270 416840 236470 185650 242690 267270 240160 303140 281260 286150 409160 321850 319160 308880 382100 313000 318270 411960 338020 395630 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 242550000 1010 769 968 1832;1833;1834;1835;1836 1504;1505;1506 1504 3 9606 Homo sapiens -0.020065892838147192 AGGIETIANEYSDR Unmodified 1494.6951 0.69505079 3544 P34932;B4DH02;V9HW33;Q59GF8;O14992;P34932-2 HSPA4;HEL-S-5a;HS24/p52 Heat shock 70 kDa protein 4 yes no 0 0 0 3 0.816 1 1 1 51.348 51.396 2 2.3509999999999997E-46 14746 20230619_1882_Aki_TMTPro18x_K_F3 306.48 258.05 326050 278730 308430 358390 284880 348930 356100 326480 376120 480150 438110 455330 519760 402960 403520 566540 486050 510690 301440 255800 314790 355180 299960 352980 355570 339320 385100 476100 450190 461610 522130 426180 417840 563050 464420 485550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 486830000 1011 3544 969 1837;1838;1839 1507;1508 1508 2 9606 Homo sapiens -0.032508931464462876 AGGPATPLSPTR Unmodified 1123.5986 0.59857163 1473 Q03252;A0A384NPH0 LMNB2 Lamin-B2 yes no 0 0 0 5.33 3.09 1 1 1 38.712 38.729 2 6.6421E-08 8935 20230619_1888_Aki_TMTPro18x_K_F8 204.48 155.69 550960 406260 456910 493600 496280 538780 591210 621750 778700 492560 581070 513000 543560 435220 560460 564070 672340 523090 508430 372830 472830 492060 515370 543270 596200 625830 773610 505760 603410 517800 556820 458370 575740 562500 641170 497810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 619040000 1012 1473 970 1840;1841;1842 1509;1510;1511 1511 3 9606 Homo sapiens 0.04171628874951239 AGGPGLER Unmodified 755.3926 0.3926016 3484;3299 P21333;P21333-2;Q60FE5;Q60FE6;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91;H0Y5C6;O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-7;E7EN95;Q68CT4;H7C5L4 FLNA;FLJ00119;FLNB;DKFZp686A1668 Filamin-A;Filamin-B no no 0 0 0 3 0.816 1 1 1 31.948 32.014 2 0.0092449 6300 20230619_1883_Aki_TMTPro18x_K_F4 102.3 31.384 217060 121000 254610 258930 423440 489360 308710 366130 371670 235980 402070 476110 339830 328080 412830 164950 427420 420850 200590 112030 258100 252790 423570 474100 320000 378840 375680 252970 409020 466890 352500 334700 417890 183560 408760 397040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 217370000 1013 3484;3299 971 1843;1844;1845 1512;1513;1514 1514 3 9606 Homo sapiens 0.005121004863212875 AGGPHLEYFVR Unmodified 1244.6302 0.63020611 3395 P07101-3;P07101-4;P07101-2;P07101;P07101-6;P07101-5 TH Tyrosine 3-monooxygenase yes no 0 0 0 4.5 3.5 1 1 45.533 45.547 3 2.43E-17 12533 20230619_1880_Aki_TMTPro18x_K_F1 218.6 193.77 140540 105730 126890 359170 115760 114070 145410 152560 158660 167730 181930 181460 169890 156000 180100 187980 191010 205270 129780 98745 131230 337760 121830 134450 145360 154130 161810 169030 185070 182750 174330 163430 183610 189330 182750 194730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 615010000 1014 3395 972 1846;1847 1515;1516 1515 2 9606 Homo sapiens 0.01767621628869165 AGGPPQVAGAQAACSEDR Unmodified 1740.7849 0.78494521 1141 D6RBJ6;B3KVZ3;A0A0S2Z5T0;Q9H3R5 CENPH Centromere protein H yes no 0 0 0 3 0 1 37.846 37.899 3 1.4758E-18 8727 20230619_1882_Aki_TMTPro18x_K_F3 171.78 152.21 16539 11154 13719 14470 16059 18634 17360 20340 18142 18277 18944 19944 23948 18163 14838 14895 21567 19678 15255 10247 14213 14398 16543 18558 17460 20590 18480 18627 19615 20097 23838 18640 15617 15292 20557 18647 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63857000 1015 1141 973 1848 1517 1517 1 9606 Homo sapiens -0.05581586809512373 AGGPTTPLSPTR Unmodified 1153.6091 0.60913632 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 LMNB1 Lamin-B1 yes no 0 0 0 5.5 2.69 1 1 1 1 38.771 38.804 2 2.6656E-09 9500 20230619_1880_Aki_TMTPro18x_K_F1 179.09 143.73 560420 448920 455150 480440 599080 664010 437740 410450 555360 424130 517150 471250 464980 403920 546500 550460 592320 436100 517330 411360 473280 484940 607120 651910 454430 437370 557270 429900 529970 474470 480270 426330 556780 544470 565200 416000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1233800000 1016 3482 974 1849;1850;1851;1852 1518;1519;1520 1518 3 9606 Homo sapiens 0.038476115293633484 AGGQINHDLHER Unmodified 1345.6487 0.64870972 4594 Q9NU22;Q6ZVV6 MDN1 Midasin yes no 0 0 0 3 0 1 27.611 27.732 4 0.018389 4738 20230619_1882_Aki_TMTPro18x_K_F3 65.395 47.586 7921.1 9817 7164.5 7164.7 8694.7 8208.4 7357 9626.8 10183 9334.9 11421 9549.6 10838 8348 12496 10167 11117 9755.2 7342.1 8958.4 7360.8 7482.6 8870.7 8268.8 7590.8 9719.5 10260 9455 11625 9654 11149 8750.5 12588 10173 10640 9274.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10645000 1017 4594 975 1853 1521 1521 1 9606 Homo sapiens -0.010288684672104864 AGGSAALSPSK Unmodified 944.49271 0.49270958 4293;1866 Q92522;A0A994J4R3 H1FX Histone H1x no no 0 0 0 8 0 1 39.128 39.115 2 0.00018481 9110 20230619_1888_Aki_TMTPro18x_K_F8 150.61 99.263 44331 26868 48021 51335 94876 102160 70271 80650 79588 7175.5 13672 18209 14448 14431 35907 11278 21752 13861 40954 24819 49203 50428 94158 98878 72517 81848 77716 11660 17251 17909 15781 14826 35212 11612 20894 13167 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15025000 1018 4293;1866 976 1854 1522 1522 1 9606 Homo sapiens 0.018242930294604776 AGGVFTPGAAFSK Unmodified 1208.619 0.61897272 1474 A0A384NPM7;Q8NBX0 SCCPDH Saccharopine dehydrogenase-like oxidoreductase yes no 0 0 0 3 0 1 55.608 55.649 2 0.00011864 16621 20230619_1882_Aki_TMTPro18x_K_F3 133.89 109.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1019 1474 977 1855 1523 1523 1 9606 Homo sapiens 0.023007995347597898 AGGVGGLR Unmodified 685.38712 0.38712229 3311 O75607 NPM3 Nucleoplasmin-3 yes yes 0 0 0 7.5 0.5 1 1 34.248 34.285 2 0.00069611 7011 20230619_1887_Aki_TMTPro18x_K_F7 158.16 37.261 226120 120930 245790 258120 372410 381450 309630 358430 354560 222570 291540 311960 286040 262020 269310 152820 348550 294690 208780 111990 250000 250740 374860 375570 317270 363910 355740 235120 302000 310730 291530 266240 277820 163700 332350 278600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98003000 1020 3311 978 1856;1857 1524;1525 1524 2 9606 Homo sapiens 0.031844216945046355 AGGVGLVR Unmodified 727.43407 0.43407249 3045 H0YF29;Q6P1X6-2;Q6P1X6 C8orf82 UPF0598 protein C8orf82 yes no 0 0 0 8 0 1 38.248 38.234 2 0.021603 8766 20230619_1888_Aki_TMTPro18x_K_F8 87.582 44.516 80266 59571 69126 83879 96362 92230 98671 95244 120260 88678 97229 94562 102050 89934 85673 99767 125910 105040 74092 54753 71641 82787 97938 92709 99960 96927 120290 90220 101020 95613 103300 93436 89691 100360 119930 99787 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40235000 1021 3045 979 1858 1526 1526 1 9606 Homo sapiens 0.05945281245658407 AGHCAVAINTR Unmodified 1168.5771 0.57712468 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4;Q05C05;P51610-3 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 5.5 2.69 1 1 1 1 30.211 30.248 3 2.5912E-06 5720 20230619_1888_Aki_TMTPro18x_K_F8 149.31 111.88 58040 29906 57524 62537 83505 73919 68610 74207 78904 62077 88164 85098 77024 73636 73869 60998 82467 81310 53540 27690 58874 60565 84147 73873 70380 75455 80091 64109 89508 84961 78863 75644 75571 62695 78812 77018 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 184250000 1022 1331 980 1859;1860;1861;1862 1527;1528;1529 1529 3 9606 Homo sapiens -0.000420794254523571 AGHLILQDR Unmodified 1021.5669 0.56687757 2309 B2RD09;Q96P11-2;Q96P11;Q96P11-4;Q96P11-5;Q63ZY6-5;Q63ZY6-6;Q63ZY6;Q96P11-3;B4E119;Q63ZY6-2 NSUN5;NSUN5P2 Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative methyltransferase NSUN5C yes no 0 0 0 6.5 0.5 1 1 37.311 37.378 3 0.00047196 8490 20230619_1886_Aki_TMTPro18x_K_F6 113.62 49.325 81955 37161 71796 79076 81479 70767 86707 86441 104310 86866 94796 86622 97065 84824 85100 96450 94006 93985 75493 34445 73946 76249 83899 72527 87655 87247 104830 87787 97742 87942 98447 88163 87300 96575 89858 89293 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 74318000 1023 2309 981 1863;1864 1530;1531 1530 2 9606 Homo sapiens 0.05695680911662748 AGHNVIALVGGATAR Unmodified 1405.779 0.77899561 3046 H0YHS6;Q9Y2Z4 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial yes no 0 0 0 4 0 1 45.118 45.162 3 2.5754E-05 11789 20230619_1883_Aki_TMTPro18x_K_F4 100.45 70.647 43448 31028 52463 46906 54069 52096 55814 54712 68949 55317 61612 55292 61223 51964 56656 68604 61592 66614 40212 28547 52527 46137 56012 52347 56585 55726 69160 55902 63496 56080 62286 54593 58034 68524 58918 63273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198320000 1024 3046 982 1865 1532 1532 1 9606 Homo sapiens 0.09233727531773184 AGHSENGVEEDTEGR Unmodified 1585.6605 0.6604562 2354 B3KMQ6;Q9NZT2-2;Q9NZT2;Q05BV5;Q6PK21;A0A0A0MRN5 OGFR Opioid growth factor receptor yes no 0 0 0 1 0 1 27.425 27.425 3 1.5495E-14 4987 20230619_1880_Aki_TMTPro18x_K_F1 189.1 184.63 4972.9 0 4825.6 3433.2 3692.6 4339.9 6087 7101.3 7252.5 5205.7 8801.5 10124 7961.2 7072.1 3576.3 5949.1 6221.8 9253.2 4568.5 0 4890.6 3177.3 3832.8 4372.2 6037.9 7008.7 7366.8 5509.5 8920.8 9946.1 7945.1 7335.6 3874.1 6174.7 5948.3 8742.6 2 0 2 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 10376000 1025 2354 983 1866 1533;1534 1533 2 9606 Homo sapiens -0.1089476102520166 AGIATHFVDSEK Unmodified 1273.6303 0.63026569 1183 A0A140VJL0;Q6NVY1;Q6NVY1-2 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 46.205 46.286 3 5.0489E-07 12169 20230619_1885_Aki_TMTPro18x_K_F5 151.26 119.25 267500 204500 247310 269410 290010 350010 327910 301470 399710 284520 355310 287280 319290 301750 294320 325230 363750 345810 247090 187810 253770 267710 299240 346560 330470 310910 400820 288900 364560 292390 326120 311950 303720 327530 347240 328300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 378710000 1026 1183 984 1867;1868 1535;1536 1535 2 9606 Homo sapiens 0.004395768382210008 AGIFQPHVR Unmodified 1023.5614 0.56139826 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 2.5 0.5 1 1 39.9 39.964 3 0.00016782 9582 20230619_1882_Aki_TMTPro18x_K_F3 130.27 67.613 77163 55158 60612 73858 79469 77398 75608 75262 96256 94158 102210 104940 115740 89306 96769 123160 108430 102480 71168 50677 63297 73072 80944 77970 77088 77550 97153 94484 105180 105560 116730 94424 99523 121990 103590 97579 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187020000 1027 81 985 1869;1870 1537 1537 1 9606 Homo sapiens 0.05056002119840741 AGIFQSVK Unmodified 848.4756 0.47560295 564 A0A024R9B7;P09669 COX6C Cytochrome c oxidase subunit 6C yes no 0 0 0 3 0 1 51.376 51.447 2 0.0012494 14781 20230619_1882_Aki_TMTPro18x_K_F3 145.63 80.797 229960 265870 199630 206710 529460 1073700 460920 429690 1186000 11561 0 31182 40080 35103 60260 35538 43983 42013 212950 242760 211110 224460 527590 1003700 489310 471650 1115400 38017 44718 31148 40820 36092 59873 36149 42226 39843 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 243190000 1028 564 986 1871 1538 1538 1 9606 Homo sapiens 0.04530417214334648 AGIIASAR Unmodified 757.44464 0.44463717 3447 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 0 0 3.5 2.69 1 1 1 1 38.657 38.683 2 0.0017083 9464 20230619_1880_Aki_TMTPro18x_K_F1 138.33 85.17 2532100 2005200 2101300 1996600 2597400 2968700 2497500 2565600 3799000 646590 582270 527410 577090 520240 1222000 811820 951660 605470 2337600 1836400 2177300 2031200 2660500 2919000 2561500 2596800 3658100 759330 749370 543080 621740 551950 1213900 800900 910760 578530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1987899999.9999998 1029 3447 987 1872;1873;1874;1875 1539;1540;1541 1539 3 9606 Homo sapiens 0.056212639000818854 AGIICQLNAR Unmodified 1114.5917 0.59171211 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57;A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 3 0 1 47.986 48.066 2 1.2238E-06 13251 20230619_1882_Aki_TMTPro18x_K_F3 176.41 145.84 822100 679480 644810 747990 648130 875580 815100 687140 930970 444610 422070 314030 358650 325250 565450 493560 465100 305920 758860 622710 670710 751390 679260 871130 815000 709040 919850 459590 453990 325970 378260 343750 565370 483080 444870 293140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 612850000 1030 471 988 1876 1542 1542 1 9606 Homo sapiens 0.03899992722699608 AGIISTVEVLK Unmodified 1128.6754 0.67542497 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B3KU93;A0A8V8TQ95;B7Z1H4;B7Z1V9 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 4.5 3.5 1 1 61.343 61.358 3 0.00027479 19016 20230619_1880_Aki_TMTPro18x_K_F1 104.82 78.705 92927 76590 89381 95110 82618 97450 97157 88537 105950 107840 113400 114120 117940 89502 110740 121900 111050 127610 85904 70272 91032 94558 86797 98155 97401 91629 107750 108140 116210 114750 119800 94908 112820 122260 106370 121080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138850000 1031 2933 989 1877;1878 1543;1544 1543 2 9606 Homo sapiens 0.11623427371409889 AGILFEDIFDVK Acetyl (Protein N-term) 1407.7286 0.72858275 2758 C9JLU1;P52434;P52434-4;P52434-2 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes no 1 0 0 5 0 1 70.546 70.59 2 0.0021353 22348 20230619_1885_Aki_TMTPro18x_K_F5 86.275 67.66 5320.3 2830.6 3859.7 2994.1 3732.7 3508.8 3658.6 3312.5 4400.9 3817.9 6203 3080.9 3611.8 2478.9 3193.9 6844.4 3612.6 2940.9 4897.6 2598.5 4033.4 3020.9 3885.6 3507.8 3718.5 3411.2 4504.5 3810.3 6142.1 3162.1 3743.9 2804.3 3299.4 6577.5 3447.8 2837.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3008200 1032 2758 990 1879 1545 1545 1 9606 Homo sapiens 0.04102760363434754 AGILTTLNAR Unmodified 1028.5978 0.59784335 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 3.5 0.5 1 1 50.932 50.983 2 0.00047087 14402 20230619_1883_Aki_TMTPro18x_K_F4 134.05 106.91 433070 353870 359270 391190 378830 482560 415330 434170 519010 225930 223250 182150 187260 160620 286790 234490 223560 156060 399880 324330 371660 393270 393790 479780 419700 441260 510090 238730 241340 186580 197110 170200 286080 230270 214040 149310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1130400000 1033 1091 991 1880;1881 1546 1546 1 9606 Homo sapiens 0.08468834225868704 AGINQNMDAVTEELQAK Unmodified 1830.8782 0.87817689 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;A0A669KB06 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 0 5 0 1 58.521 58.578 3 0.0071128 17318 20230619_1885_Aki_TMTPro18x_K_F5 65.477 44.741 31479 24950 29875 33172 28186 32419 32251 30816 38306 34333 34045 36563 39082 32069 35751 39404 34260 40869 29090 22912 30477 32808 29541 32797 32470 31701 38510 34588 35371 36862 39559 33624 36353 39551 32840 38778 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14243000 1034 1566 992 1882 1547 1547 1 9606 Homo sapiens -0.004027071469408838 AGIPVYAWK Unmodified 1003.5491 0.54910224 1439 A0A384MTQ3;P23526;P23526-2 AHCY Adenosylhomocysteinase yes no 0 0 0 3.5 0.5 1 1 58.292 58.308 2 0.00045116 17586 20230619_1883_Aki_TMTPro18x_K_F4 135.35 83.496 505030 456350 482630 453920 412060 512060 482240 490660 505400 492070 427170 356790 446520 363720 532980 460430 452070 360000 467120 417720 490950 459780 435950 513000 483080 502650 510640 493160 442640 368840 459060 380140 535540 455820 432680 343340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 574620000 1035 1439 993 1883;1884 1548;1549 1549 2 9606 Homo sapiens 0.04746965656784141 AGIQQVYTR Unmodified 1034.5509 0.55089316 898 A0A590UJ56;A0A590UJR3;A0A590UJ50;A0A090N7U0;Q13616;A0A590UJ21;A0A590UJC4;B4DLA3;A0A590UK34;A0A590UJA0;A0A590UJM8;A0A590UJ59;A0A590UJ97 CUL1 Cullin-1 yes no 0 0 0 8 0 1 40.215 40.205 2 0.0013765 9574 20230619_1888_Aki_TMTPro18x_K_F8 116.37 79.976 74587 59169 70790 68072 84756 93233 83168 81627 98037 78986 81099 74461 83444 63506 78028 86354 96643 68576 68926 54256 72422 68362 86913 92109 84395 84098 98322 79874 84065 75476 84812 67087 80500 85400 92093 65425 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43055000 1036 898 994 1885 1550 1550 1 9606 Homo sapiens 0.03499974674741679 AGISFIIK Unmodified 847.51674 0.51673948 2144;1327 A0A1W6S962;X5D7Q9;P78347-5;A0A0A0VEB4;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52 GTF2I;GTF2I-RARA General transcription factor II-I no no 0 0 0 3.5 0.5 1 1 59.498 59.513 3 0.002912 18132 20230619_1883_Aki_TMTPro18x_K_F4 91.065 12.569 43000 36777 41912 41344 39776 49551 46739 42573 48965 26430 20986 14773 16753 14656 32372 19622 20988 14732 39764 33706 42639 41497 41713 49314 46771 43554 48575 27270 22660 15550 17983 15388 31942 19408 20148 14067 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12660000 1037 1327;2144 995 1886;1887 1551 1551 1 9606 Homo sapiens 0.08688178253794376 AGITTIEAVK Acetyl (Protein N-term) 1043.5863 0.58627561 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;D6R904;Q5VU61;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4 TPM3;DKFZp686J1372 Tropomyosin alpha-3 chain no no 1 0 0 3.5 1.12 1 1 1 1 59.149 59.173 2 0.00030881 18059 20230619_1882_Aki_TMTPro18x_K_F3 60.973 53.493 648100 507890 591350 598110 542430 748630 682930 659310 725250 893250 753420 870830 894900 737660 666830 1020400 869700 953330 598690 465840 604970 598670 572340 743240 681820 685850 738710 889250 778480 880180 898050 780310 695280 1016000 830740 905880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3073399999.9999995 1038 1095;1096 996 1888;1889;1890;1891 1552;1553 1552 2 9606 Homo sapiens 0.06622592411895312 AGITTIEAVKR Acetyl (Protein N-term) 1199.6874 0.68738664 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;D6R904;Q5VU61;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4 TPM3;DKFZp686J1372 Tropomyosin alpha-3 chain no no 1 0 1 7 0.816 1 1 1 50.852 50.929 2 3.6998E-12 13975 20230619_1887_Aki_TMTPro18x_K_F7 85.731 32.265 608730 554420 548110 585080 630990 637920 646420 656980 588680 677170 616870 486110 620210 427260 675770 504340 467120 338170 562810 507740 563230 589360 648680 641910 649260 670190 604810 677140 631140 500300 634480 447120 673680 497000 448060 323430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2120299999.9999998 1039 1095;1096 997 1892;1893;1894 1554;1555 1555 2 9606 Homo sapiens 0.0955304411461384 AGITTTLNSR Unmodified 1032.5564 0.55637247 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 2 0 1 40.317 40.39 2 2.779E-09 9977 20230619_1881_Aki_TMTPro18x_K_F2 195.48 155.41 225660 153550 184920 204230 216820 252410 227200 235540 304470 182930 188350 146710 185190 149060 182880 182580 198500 136610 208130 141100 191850 202670 223310 251090 230770 240320 300780 186870 198300 150890 189010 155460 186840 180410 189340 130460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 242610000 1040 2188 998 1895 1556 1556 1 9606 Homo sapiens 0.041396534665636864 AGKPVICATQMLESMIK 2 Oxidation (M) 1907.9519 0.95187588 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 2 1 2 0 1 55.696 55.717 4 2.626E-07 16832 20230619_1881_Aki_TMTPro18x_K_F2 119.46 96.359 53862 37344 43226 48530 54701 48552 59156 54128 55985 58077 65336 55727 55009 48850 48809 62265 50596 55957 49676 34304 44991 48093 55940 49252 59277 55030 57585 58395 66073 56494 56180 51310 49921 61966 48429 53195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363970000 1041 370;3451 999 1896 1557 1557 221;222 1 9606 Homo sapiens 0.034218016995282596 AGKPVICATQMLESMIK Oxidation (M) 1891.957 0.95696126 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 1 1 3 0 1 60.378 60.407 4 8.5151E-09 18617 20230619_1882_Aki_TMTPro18x_K_F3 136.34 114.19 82263 65398 66006 82139 83095 84314 85328 83543 83401 104550 96886 92186 99006 80241 96925 105890 98971 101820 75928 60018 68751 81585 84979 85102 85848 85964 85739 104110 98852 93749 100840 84551 98761 105740 94695 96738 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 475200000 1042 370;3451 999 1897 1558 1558 221;222 1 9606 Homo sapiens 0.04666105562114353 AGKPVICATQMLESMIK Unmodified 1875.962 0.96204664 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 1 4 0 1 63.474 63.48 3 1.6948E-06 19803 20230619_1883_Aki_TMTPro18x_K_F4 114.28 100.24 74046 60604 63712 65868 58985 73965 70763 73420 71295 88717 85531 76117 99324 78049 87766 104630 86670 93059 68389 55536 65533 66226 62042 74167 70719 75426 73264 88429 87631 77981 100320 81882 89486 104020 82980 88488 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96710000 1043 370;3451 999 1898 1559 1559 1 9606 Homo sapiens 0.059104094247459216 AGLELLSDQGYR Acetyl (Protein N-term) 1362.6779 0.67794416 4560 Q9NPD3;A0A994J4D9;E9PPI9 EXOSC4 Exosome complex component RRP41 yes no 1 0 0 2.5 0.5 1 1 63.081 63.101 2 3.62E-18 20010 20230619_1881_Aki_TMTPro18x_K_F2 189.38 172.82 43114 36034 43652 51636 43386 47577 48272 50669 57612 44339 44717 52178 57314 49873 55403 58131 54096 62885 39876 33111 44342 50792 45222 48474 48681 51394 57625 45412 47104 52542 58017 51957 56316 58542 51832 59646 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 212130000 1044 4560 1000 1899;1900 1560;1561 1560 2 9606 Homo sapiens 0.011112310384305601 AGLEMSLR Oxidation (M) 891.4484 0.44840192 956 A0A804HJA6;A0A0A0MSP7;A0A804HKI5;Q5JV73 FRMPD3 FERM and PDZ domain-containing protein 3 yes no 0 1 0 4.5 0.5 1 1 37.468 37.536 2 0.082785 8544 20230619_1883_Aki_TMTPro18x_K_F4 62.717 12.014 93281 81094 83054 83072 104830 115320 90932 96289 124490 103790 124280 123810 108130 100810 94917 117340 122550 118150 86210 74259 85537 84190 106880 113770 93546 99852 124840 105160 126780 124020 110320 105560 98400 117640 116960 112230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116910000 1045 956 1001 1901;1902 1562 1562 536 1 9606 Homo sapiens -0.0016643438834762492 AGLESSEGGGGPERPGAR Unmodified 1682.7972 0.79722445 4181 Q86SK9;Q86SK9-2;Q9BSN4 SCD5 Stearoyl-CoA desaturase 5 yes no 0 0 1 2.5 0.5 1 1 32.689 32.755 3 1.4006E-30 6649 20230619_1882_Aki_TMTPro18x_K_F3 233.47 198.51 67580 61980 68624 65719 52056 49698 22876 24325 27506 63009 80342 96848 61716 68311 78375 79390 96152 103520 62544 56762 69292 65871 54563 50975 25061 27725 29994 62578 79264 95735 64480 71926 80394 80944 91877 98039 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 66498000 1046 4181 1002 1903;1904 1563;1564;1565 1565 3 9606 Homo sapiens -0.01686227074810631 AGLEVLFASAAPAITCR Acetyl (Protein N-term) 1787.924 0.92400487 1205 Q5QPM9;B4DFK1;Q5QPM7;A0A140VJT2;Q92530 PSMF1 Proteasome inhibitor PI31 subunit yes no 1 0 0 4.5 3.5 1 1 68.224 68.234 2 6.8751E-09 21207 20230619_1888_Aki_TMTPro18x_K_F8 106.49 91.341 0 0 897.56 721.41 2019 2512.9 0 1276.8 1428 1175.7 1397.3 1253.9 1487.3 1131.2 1047.7 1351.8 0 894.98 0 0 839.37 675.26 1958.1 2373.6 0 1297.5 1313 1192.6 1367.9 1266.3 1441.9 1182.3 983.32 1325.5 0 851.61 0 0 1 1 2 2 0 1 1 1 1 1 1 1 1 1 0 1 8193900 1047 1205 1003 1905;1906 1566;1567 1567 2 9606 Homo sapiens 0.06155982825976025 AGLGHPAAFGR Acetyl (Protein N-term) 1094.5621 0.56212655 2229 B2R644;O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 no no 1 0 0 6 1 1 1 39.689 39.766 2 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 85904000 1048 2229 1004 1907;1908 0 9606 Homo sapiens 0.018627967689099023 AGLGSPERPPK Unmodified 1107.6037 0.60365701 4520 Q9H6F5;H0YG79;Q6ZW18 CCDC86 Coiled-coil domain-containing protein 86 yes no 0 0 1 8 0 1 36.944 36.929 3 0.00029965 8237 20230619_1888_Aki_TMTPro18x_K_F8 89.403 59.596 88798 66065 88610 90176 111480 117560 117800 115930 132320 98470 118430 119320 130710 103080 110460 136860 152320 135450 82061 60700 90393 89438 114110 116740 118820 118070 133310 101140 122700 119740 132060 108670 115120 136830 145220 128730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57986000 1049 4520 1005 1909 1568 1568 1 9606 Homo sapiens 0.0541593273756007 AGLIQSR Unmodified 743.42899 0.42898711 4645 Q9P287-2 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 0 0 1 0 1 36.99 36.99 2 0.025649 8779 20230619_1880_Aki_TMTPro18x_K_F1 97.602 37.244 133950 92085 110550 130700 133380 137180 119430 121990 156740 126980 148190 136380 139750 119120 126870 114190 175180 138820 123560 84674 114680 128830 136420 137880 122400 125830 157130 128430 151970 137430 142340 123220 131810 116270 166890 131730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81726000 1050 4645 1006 1910 1569 1569 1 9606 Homo sapiens 0.04700977383049576 AGLLAGDR Unmodified 771.4239 0.42390173 2231 B2R6A3;O14745;J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF;Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 0 0 0 5 0 1 40.828 40.916 2 0.00080753 9902 20230619_1885_Aki_TMTPro18x_K_F5 124.59 76.679 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1051 2231 1007 1911 1570 1570 1 9606 Homo sapiens 0.029046735204246943 AGLLGQPR Unmodified 810.47119 0.47118627 378 A0A024R648;Q9Y5J7;A0A1W2PRH9;A0A1W2PQS5;G3V502 TIMM9 Mitochondrial import inner membrane translocase subunit Tim9 yes no 0 0 0 1.5 0.5 1 1 40.888 40.925 2 0.012606 10240 20230619_1881_Aki_TMTPro18x_K_F2 95.62 47.117 256840 210840 238400 243640 293720 275680 270810 249950 325550 239990 309170 284770 280380 213670 253630 328060 337710 304390 237360 193320 244500 243830 299830 275940 276030 256970 327550 244590 316510 284980 285740 228830 263420 326250 322080 289490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 243620000 1052 378 1008 1912;1913 1571 1571 1 9606 Homo sapiens 0.058369527914123864 AGLNCSTENMPIK Oxidation (M) 1449.6592 0.65919933 3389 Q53XC0;P05198;H0YJS4;G3V4T5 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 1 0 5.33 0.471 2 1 42.853 42.939 3 0.00073782 10737 20230619_1886_Aki_TMTPro18x_K_F6 91.858 75.284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1053 3389 1009 1914;1915;1916 1572;1573;1574 1574 1997 3 9606 Homo sapiens -0.04764389919341738 AGLNCSTENMPIK Unmodified 1433.6643 0.66428471 3389 Q53XC0;P05198;H0YJS4;G3V4T5 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 7 0 1 48.31 48.396 3 3.88E-05 12852 20230619_1887_Aki_TMTPro18x_K_F7 94.402 71.026 404940 290550 426100 438870 428770 552460 457680 426540 541790 506190 530590 472010 573650 429730 494850 589100 640940 524150 374310 267310 431310 432230 446600 546760 462410 446640 546730 506520 546340 479690 580130 453320 513110 585520 611030 498960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 511520000 1054 3389 1009 1917 1575 1575 1 9606 Homo sapiens -0.0352008605671017 AGLNSLEAVK Acetyl (Protein N-term) 1042.5659 0.56587452 3746 P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1;A0A590UK79;A0A590UJB9 TPM4;HEL-S-108 Tropomyosin alpha-4 chain yes no 1 0 0 3.5 0.5 1 1 58.656 58.672 2 5.0896E-07 17734 20230619_1883_Aki_TMTPro18x_K_F4 98.392 71.79 407910 291210 310270 402150 367410 521110 486080 478850 656430 385050 327570 337700 391690 305640 346710 463740 415390 329850 376130 267650 324980 398310 381720 516450 487960 489500 645190 393340 354430 344160 395680 324640 357750 455650 396190 315030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 664400000 1055 3746 1010 1918;1919 1576 1576 1 9606 Homo sapiens 0.04629421752088092 AGLNSLEAVKR Acetyl (Protein N-term) 1198.667 0.66698555 3746 P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1;A0A590UK79;A0A590UJB9 TPM4;HEL-S-108 Tropomyosin alpha-4 chain yes no 1 0 1 6.5 0.5 1 1 50.126 50.205 2 5.4981E-09 13668 20230619_1887_Aki_TMTPro18x_K_F7 80.787 60.458 497530 507830 509500 466110 650760 576420 673570 635410 515520 489270 496730 302190 426630 263040 611900 285990 262830 199990 460860 464380 518360 476240 663650 576560 672870 640950 533450 496390 506710 314420 445270 274360 597870 283370 254410 191100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 443700000 1056 3746 1011 1920;1921 1577;1578 1578 2 9606 Homo sapiens 0.07559873454783883 AGLQFPVGR Unmodified 943.52395 0.52395013 3459;74;3424 P16104;Q96QV6;Q9BTM1-2;B2R5B6;A0A3B3IS11;V9GZN0;Q71UI9-5;Q99878;A4FTV9;A0A0U1RR32;A0A024R017;Q08AJ9;B2R5B3;A0A024RAS2;A3KPC7;A0A0U1RRH7;Q16777;P04908;Q9BTM1;P20671;P0C0S8;Q6FI13;Q7L7L0;Q93077;Q96KK5;Q71UI9;P0C0S5;C9J0D1;A0A494C189;Q71UI9-2 H2AFX;HIST1H2AA;H2AFJ;H2AFV;HIST1H2AJ;HIST1H2AK;HIST1H2AC;HIST1H2AB;HIST1H2AH;HIST2H2AC;HIST1H2AD;HIST1H2AG;HIST2H2AA3;HIST3H2A;H2AFZ Histone H2AX;Histone H2A type 1-A;Histone H2A.J;Histone H2A;Histone H2A.V;Histone H2A type 1-J;Histone H2A type 2-C;Histone H2A type 1-B/E;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 2-A;Histone H2A type 3;Histone H2A type 1-C;Histone H2A type 1-H;Histone H2A.Z no no 0 0 0 4.14 2.23 1 1 1 1 1 1 1 49.391 49.447 2 0.0019644 13648 20230619_1886_Aki_TMTPro18x_K_F6 124.08 78.361 5414100 4496500 4564800 4745900 4207200 5058400 4959100 4903200 5471200 4275600 3875600 3579600 4096900 3605600 4839300 4742800 4506400 4194100 5000200 4119200 4703800 4779100 4424200 5088600 4972400 5003400 5478800 4336100 4061800 3669700 4211200 3778000 4888900 4717600 4312800 3990500 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 147900000000 1057 3459;74;3424 1012 1922;1923;1924;1925;1926;1927;1928 1579;1580;1581;1582;1583;1584;1585 1584 7 9606 Homo sapiens 0.04992910854230104 AGLQSLEASGR Unmodified 1087.5622 0.56218613 2517 O60784-2;O60784;O60784-3;B4DKQ5;O60784-4;B4DJ44;B3KUF5 TOM1 Target of Myb protein 1 yes no 0 0 0 5.5 0.5 1 1 43.179 43.266 2 8.7973E-06 10875 20230619_1885_Aki_TMTPro18x_K_F5 150.15 100.71 48845 37902 49184 54636 50967 61790 63680 58048 77904 62767 64415 68771 70054 53736 67032 60832 68768 63819 45153 34840 50013 53872 53196 61820 63876 59706 77975 63394 67007 69000 71139 56329 68273 61211 65746 60602 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55566000 1058 2517 1013 1929;1930 1586 1586 1 9606 Homo sapiens 0.021907519782416784 AGLSNYGNPR Unmodified 1047.5098 0.50975662 241 U3KQL4;B4DUH2;A0A024R3F7;B4DPL8;A8K0S7;U3KPU7;Q6IBR9;A0A024R3H9;U3KQS2;A0A024R3L1;O43826;O43826-2 SLC37A4 Glucose-6-phosphate translocase yes no 0 0 0 1 0 1 37.101 37.101 2 0.0023973 8850 20230619_1880_Aki_TMTPro18x_K_F1 96.331 65.761 17646 10498 17459 16664 19383 18166 19587 18163 23704 18506 25773 23503 24884 22803 20649 22387 26978 27657 16288 9672.8 17771 16338 19966 18256 19865 18572 23970 18851 26285 23625 25238 23521 21431 22795 25756 26210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13106000 1059 241 1014 1931 1587 1587 1 9606 Homo sapiens -0.012097863647341 AGLSPANCQSDR Unmodified 1274.5673 0.56734786 3897 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 0 0 0 4.5 0.5 1 1 33.999 34.068 2 2.5432E-05 7142 20230619_1883_Aki_TMTPro18x_K_F4 169.76 154.61 31202 20357 34522 33242 39010 42839 38169 37878 49012 33619 36267 38081 44373 37929 36872 32862 46904 44663 28840 18756 34852 32622 40148 42456 38862 38923 48772 34383 38172 38440 44690 38881 38152 33782 44765 42304 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 43222000 1060 3897 1015 1932;1933 1588;1589 1588 2 9606 Homo sapiens -0.05895312221468885 AGLSQSLFER Unmodified 1106.572 0.57202253 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 7.5 0.5 1 1 50.738 50.817 2 1.0682E-09 13881 20230619_1888_Aki_TMTPro18x_K_F8 209.73 162.07 392050 320110 375150 363670 395810 420050 430190 408060 467530 415970 405850 354720 429040 342420 396750 463780 446690 409600 362380 293460 382730 364600 410310 420330 432880 417900 471700 418240 420010 362820 435540 360140 407120 460880 426650 389750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 612880000 1061 462 1016 1934;1935 1590;1591 1591 2 9606 Homo sapiens 0.0229993998361806 AGLTDLQR Acetyl (Protein N-term) 914.48214 0.48214489 3320 O75935-3;O75935;X6RA56;A0A0A0MRV8;Q8NB28;X6RLR1;O75935-2 DCTN3 Dynactin subunit 3 yes no 1 0 0 1.5 0.5 1 1 46.617 46.657 2 0.00074191 12974 20230619_1880_Aki_TMTPro18x_K_F1 132.09 59.055 58165 41373 44113 49822 43618 49537 51557 91406 74764 47735 59159 57764 61856 51137 49963 53891 74868 86430 53632 37971 46008 49672 45650 51045 52324 89174 74115 50860 61518 58016 62505 53175 52411 55907 71472 81704 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 74014000 1062 3320 1017 1936;1937 1592;1593 1592 2 9606 Homo sapiens 0.021483103750369992 AGLTFNHDPPLSQNQR Unmodified 1793.8809 0.8808945 1336 B7ZM73;A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;F8VZV1 MON2 Protein MON2 homolog yes no 0 0 0 8 0 1 42.947 42.955 3 6.004E-06 10660 20230619_1888_Aki_TMTPro18x_K_F8 110.38 92.895 37527 31466 36251 35911 35275 44419 38699 42766 43717 42796 47058 44772 44105 39074 43547 44694 52923 47195 34696 28845 36920 36026 36860 44223 39000 43784 44380 43307 47983 45181 45100 40788 44812 44963 50506 44820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27959000 1063 1336 1018 1938 1594;1595 1594 2 9606 Homo sapiens 0.015709290928953124 AGLTHLITMDLHQK Unmodified 1576.8395 0.83954696 16 E7EPA1;B2R7R5;A0A024QYY3;O60256-3;O60256;C9K0K7;C9JDU5;C9JJS3;O60256-4;O60256-2 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes no 0 0 0 2 0 1 52.926 52.959 4 0.0021057 15752 20230619_1881_Aki_TMTPro18x_K_F2 73.91 0 25153 21732 22188 24186 22045 21537 20855 23932 27161 24929 26283 24776 24386 22266 23236 27925 27383 22735 23244 19915 22788 24200 22875 22051 21308 24308 27275 25137 26912 25087 24909 23334 23901 27670 26128 21666 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93235000 1064 16 1019 1939 1596 1596 1 9606 Homo sapiens 0.07420076799871822 AGLVDDFEK Unmodified 992.48148 0.48147619 3323 O75947;O75947-2;A0PJH2;F5H608 ATP5H ATP synthase subunit d, mitochondrial yes no 0 0 0 3 0.816 2 2 2 53.877 53.909 2;3 0.00070247 15751 20230619_1883_Aki_TMTPro18x_K_F4 126.41 71.862 275940 276670 308160 318810 317940 366700 351730 377710 430750 378380 422420 423200 432420 358370 358260 455630 470400 521090 255760 253500 310620 319240 330510 367420 355210 385020 433830 383770 434140 425560 437550 377090 372350 459620 449340 494050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 815590000 1065 3323 1020 1940;1941;1942;1943;1944;1945 1597;1598;1599 1599 3 9606 Homo sapiens -0.015065290646703033 AGLVGPEFHEK Unmodified 1182.6033 0.60332266 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0 PLEC;PLEC1 Plectin yes no 0 0 0 5 0 1 45.17 45.248 3 0.014723 11737 20230619_1885_Aki_TMTPro18x_K_F5 65.241 32.921 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1066 3921 1021 1946 1600 1600 1 9606 Homo sapiens 0.019325130176866878 AGLVIGK Unmodified 656.42211 0.42211082 3197;2644;4322 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5;M0QYH3;M0QXW7;B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 KHSRP;FUBP1 Far upstream element-binding protein 2;Far upstream element-binding protein 1 no no 0 0 0 2 0 1 48.569 48.634 3 0.03513 13796 20230619_1881_Aki_TMTPro18x_K_F2 66.994 31.894 185680 144040 168150 173080 207560 222830 200890 195400 243590 212740 246890 234040 247550 201790 193340 257570 264940 238390 171500 132140 172890 173060 212350 220950 204250 201970 245770 214820 253020 235670 250060 212160 201850 256680 252620 226730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147600000 1067 3197;2644;4322 1022 1947 1601 1601 1 9606 Homo sapiens 0.08015664502465825 AGMTEEAQR Unmodified 991.43929 0.4392938 3671 P57740;P57740-2;B3KMK0;P57740-3 NUP107 Nuclear pore complex protein Nup107 yes no 0 0 0 1.5 0.5 1 1 31.174 31.207 2 0.045465 6173 20230619_1881_Aki_TMTPro18x_K_F2 67.993 53.323 12115 5869.4 11841 14123 13616 18898 12899 13680 12980 11132 15706 16088 17283 14451 13574 8211.5 18833 16696 11172 5450.4 12096 13622 14013 18599 13058 14270 13319 11544 16055 16040 17412 14642 14126 8847.2 17954 15776 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17500000 1068 3671 1023 1948;1949 1602 1602 1 9606 Homo sapiens -0.05676827744696311 AGMTHIVR Oxidation (M) 899.46472 0.46472069 3567;2399 B3KS36;B4DN06;F8WCR1;P39023;Q8TBW1;Q96QL0;H7C422;H7C3M2 RPL3 60S ribosomal protein L3 no no 0 1 0 2.81 2.4 6 6 1 1 2 27.462 27.498 3 0.00022702 4895 20230619_1880_Aki_TMTPro18x_K_F1 125.5 87.946 292120 221270 281100 277450 314830 344150 320840 319310 382250 265760 278740 251420 288270 226310 279000 294700 320520 241460 269910 203100 286950 276480 324580 342350 325000 326450 381490 271260 291130 255280 293440 237910 286210 292060 305720 230190 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 12 287850000 1069 2399;3567 1024 1950;1951;1952;1953;1954;1955;1956;1957;1958;1959;1960;1961;1962;1963;1964;1965 1603;1604;1605;1606;1607;1608;1609;1610;1611;1612;1613;1614;1615;1616;1617;1618;1619;1620;1621 1612 1476 19 9606 Homo sapiens 0.010966915684093692 AGMTHIVR Unmodified 883.46981 0.46980607 3567;2399 B3KS36;B4DN06;F8WCR1;P39023;Q8TBW1;Q96QL0;H7C422;H7C3M2 RPL3 60S ribosomal protein L3 no no 0 0 0 3.67 3.09 1 1 1 32.505 32.525 2 0.0041912 6995 20230619_1880_Aki_TMTPro18x_K_F1 117.18 94.554 80645 66342 63564 67211 77659 77534 78626 80645 89960 67317 72523 60555 70276 54196 69305 78275 83296 66935 74442 60756 66215 67988 79566 77742 79560 81796 90243 68574 75058 61659 71740 57404 71307 77611 79448 63755 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54109000 1070 2399;3567 1024 1966;1967;1968 1622;1623 1622 2 9606 Homo sapiens 0.023409954310182002 AGNAIHAILLYR Unmodified 1310.7459 0.74590457 337 A0A024R5F4;P50416;B2RAQ8;P50416-2;H3BMD2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 0 6 0 1 52.719 52.796 3 0.0088114 15088 20230619_1886_Aki_TMTPro18x_K_F6 67.999 30.303 144060 106060 121160 137850 128060 165740 141980 148690 218500 91475 96357 108440 103540 91194 131920 120730 114160 135510 132950 97396 125220 136920 133240 164980 144620 151550 212960 96300 105060 108800 106870 96201 132610 121700 109550 128470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98268000 1071 337 1025 1969 1624 1624 1 9606 Homo sapiens 0.10296145479742336 AGNASKDEIDSAVK Unmodified 1403.6892 0.68923713 401 P23381;A0A024R6K8;G3V277;B4DTK8;G3V3P2;G3V227;G3V3R3;G3V3X0;G3V3S7;G3V5W1;G3V4N8;G3V4C7;G3V2C0;G3V339;G3V313;G3V4S4;G3V2F2 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 0 1 4 0.707 1 2 1 43.023 43.081 3;4 1.9481E-08 10803 20230619_1885_Aki_TMTPro18x_K_F5 147.7 111.67 117000 78830 100890 108060 113450 110850 116830 121720 153360 130660 151250 151460 151940 125040 149810 143360 166640 150360 107940 72463 104040 106760 116930 112150 118740 123830 153990 132230 155320 151930 154930 130830 153260 144190 159170 142790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 272060000 1072 401 1026 1970;1971;1972;1973 1625;1626 1626 2 9606 Homo sapiens 0.003540083418783979 AGNEKEEGETADTVGCCSLR Unmodified 2181.9267 0.92666 2724 P11387;B9EG90;A0A7P0T852 TOP1 DNA topoisomerase 1 yes no 0 0 1 2 0.816 1 1 1 40.012 40.075 3 1.1194000000000001E-29 9648 20230619_1882_Aki_TMTPro18x_K_F3 205.21 202.37 86349 79176 92610 90995 88053 90840 90028 89997 71701 100820 99477 65912 76627 49602 85609 58681 47983 25498 79953 72562 93460 90961 91746 91896 90176 92280 75309 100160 99558 67976 79169 52231 84666 57085 46118 24653 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 364040000 1073 2724 1027 1974;1975;1976 1627;1628 1628 2 9606 Homo sapiens -0.11702626360010981 AGNEYLIFQK Unmodified 1181.6081 0.60807369 2912 H3BPW1;Q9UPJ7;Q9UPJ8;E9PER6;Q53HJ9;Q6A1A2;O15530-4;O15530-5;O15530-2;O15530-3;O15530 PDPK1;PkB-like 2;PkB-like 1;PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 yes no 0 0 0 8 0 1 57.136 57.188 3 0.0062535 16676 20230619_1888_Aki_TMTPro18x_K_F8 70.977 46.642 34061 27449 31809 33653 29597 32689 34119 34533 42135 39570 37539 38397 40218 34819 40626 41751 37832 37351 31475 25184 32477 33470 31056 33175 34392 35288 42292 39690 38862 38909 40982 36393 41157 41601 36221 35525 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9366900 1074 2912 1028 1977 1629 1629 1 9606 Homo sapiens 0.02453397160456916 AGNFYVPAEPK Unmodified 1191.5924 0.59242362 3473 P18124;A0A024R814;A8MUD9;C9JIJ5;C9JZ88 RPL7 60S ribosomal protein L7 yes no 0 0 0 7.2 0.748 1 2 2 51.285 51.362 2;3 0.00011112 14164 20230619_1887_Aki_TMTPro18x_K_F7 160.36 17.328 353010 273770 295120 351140 298720 375430 348020 351490 406180 469220 415690 464020 596930 476330 358670 649960 562250 596430 325860 251330 305060 348480 311900 377130 349870 363870 411480 467740 434040 471880 592150 500230 381770 646430 536220 566930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1885899999.9999998 1075 3473 1029 1978;1979;1980;1981;1982 1630;1631 1630 2 9606 Homo sapiens 0.004291106434038738 AGNILLTEPGQVK Unmodified 1338.7507 0.75071518 1996 A8K0J3;Q9H2K8;H0YF68;A0A024QZ70;Q7L7X3-3;Q7L7X3 TAOK3;TAOK1 Serine/threonine-protein kinase TAO3;Serine/threonine-protein kinase TAO1 yes no 0 0 0 8 0 1 54.226 54.298 3 0.0096484 15411 20230619_1888_Aki_TMTPro18x_K_F8 66.708 25.087 65404 51772 66565 68145 59371 59252 74214 64245 75046 75029 77194 82954 92094 72026 81617 96826 94338 104080 60473 47537 67421 67366 62563 60724 73990 65631 76510 75484 79801 83502 92991 76009 83966 97252 90206 98746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82517000 1076 1996 1030 1983 1632 1632 1 9606 Homo sapiens 0.09488984831818925 AGNLGGGVVTIER Unmodified 1241.6728 0.67279921 3174 K7ERI7;Q7Z4W8;P35268;K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1 RPL22 60S ribosomal protein L22 yes no 0 0 0 6.8 0.748 2 2 1 46.639 46.717 2;3 8.3276E-11 12462 20230619_1886_Aki_TMTPro18x_K_F6 187.85 146.42 2164600 1753800 1855400 1990000 1838600 2167100 2112000 1984100 2330700 2544700 2433700 2363400 2699700 2199600 2135600 2783400 2659800 2626500 1999100 1607900 1911200 1993000 1920400 2174000 2120500 2054900 2367800 2536200 2502800 2402400 2719800 2305700 2214100 2776900 2539600 2496500 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 7855299999.999999 1077 3174 1031 1984;1985;1986;1987;1988 1633;1634;1635;1636 1634 4 9606 Homo sapiens 0.061629719664551885 AGNNMLLVGVHGPR Oxidation (M) 1449.7511 0.7510663 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 FLNA;FLJ00119 Filamin-A yes no 0 1 0 2.5 0.5 1 1 40.605 40.672 3 7.8083E-07 10080 20230619_1881_Aki_TMTPro18x_K_F2 124.89 112.28 131270 94466 131340 149520 169040 179850 164980 155940 180050 141790 176000 181020 165040 150550 180320 140620 173350 181680 121290 86961 134090 146750 172430 178950 167020 160640 182260 145330 180380 180920 169560 155770 182490 143910 165990 172100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 247830000 1078 3484 1032 1989;1990 1637;1638 1637 2137 2 9606 Homo sapiens 0.04418081280073238 AGNNMLLVGVHGPR Unmodified 1433.7562 0.75615168 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 FLNA;FLJ00119 Filamin-A yes no 0 0 0 3.5 0.5 1 1 45.282 45.342 3 5.053E-12 12020 20230619_1882_Aki_TMTPro18x_K_F3 152.38 136.84 72303 53390 65009 66412 76669 94057 81548 73581 104850 78661 85731 106150 89438 78047 84889 89351 103730 98523 66760 49008 66847 66347 78974 92513 82614 76743 104650 80125 89163 105480 90993 82010 87460 90116 99032 93499 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 360890000 1079 3484 1032 1991;1992 1639 1639 1 9606 Homo sapiens 0.05662385142682069 AGNVIFR Unmodified 775.43407 0.43407249 76 A0A024R040;P55809;Q6IAV5;E9PDW2;B7Z609;A1E286 OXCT1;OXCT Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes no 0 0 0 2 0 1 43.494 43.577 2 0.015042 11483 20230619_1881_Aki_TMTPro18x_K_F2 111.81 28.526 250860 219700 281060 304470 307870 331330 330020 353920 404610 367030 372870 386490 435440 360850 348430 408760 450340 439030 232300 201770 283560 300820 318190 333460 333810 360260 406720 370880 386810 390620 438340 375710 361770 411520 429820 416710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254580000 1080 76 1033 1993 1640 1640 1 9606 Homo sapiens 0.03737281245662416 AGPECLHCEEGCSK Unmodified 1632.6331 0.63306094 2201 B1Q2B0;Q6ZNB6;Q8J028 URCC5;NFXL1;HOZFP NF-X1-type zinc finger protein NFXL1 yes no 0 0 0 2 0 1 36.819 36.877 3 0.0012003 8461 20230619_1881_Aki_TMTPro18x_K_F2 77.527 70.469 12334 11553 14426 14817 15221 17505 14212 12450 16165 17211 18841 16515 18312 12364 18327 19013 22362 16448 11431 10598 14494 14725 15722 17381 14453 13203 16471 17120 19168 16667 18688 13254 18860 18853 21316 15671 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15720000 1081 2201 1034 1994 1641 1641 1 9606 Homo sapiens -0.1579502715308081 AGPEGIEPR Unmodified 924.46649 0.46649483 2049 Q6PCC8;A8K4P8;Q14146 URB2 Unhealthy ribosome biogenesis protein 2 homolog yes no 0 0 0 2 0 1 36.651 36.709 2 0.012713 8377 20230619_1881_Aki_TMTPro18x_K_F2 80.239 49.669 36449 26979 39065 40607 50363 50287 42297 39091 52968 41289 50670 45961 50056 43872 40859 45683 54050 48232 33703 24817 39636 39989 51170 49859 43441 40782 53231 41796 52022 46401 50691 45416 42461 46013 51547 45805 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46758000 1082 2049 1035 1995 1642 1642 1 9606 Homo sapiens 0.0012402385799532567 AGPEGTSQEIPK Unmodified 1212.5986 0.59863121 4347 Q99575;Q96F88;E5RK39 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 0 3.33 0.471 2 1 41.922 41.978 2;3 0.00070307 10452 20230619_1882_Aki_TMTPro18x_K_F3 117.7 65.844 214760 204570 234210 222460 183290 206530 237890 225200 132700 263180 297290 297780 334250 251890 281530 309100 338330 307230 198930 187370 235480 223160 195550 210570 233720 229890 148170 264630 298950 299230 337200 264500 290470 309530 322940 291940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 253140000 1083 4347 1036 1996;1997;1998 1643;1644;1645 1643 3 9606 Homo sapiens 0.0008358408429103292 AGPESDAQYQFTGIK Unmodified 1610.7577 0.75765105 4367 Q96IX5 USMG5 Up-regulated during skeletal muscle growth protein 5 yes yes 0 0 0 5 0 2 52.961 53.033 2;3 9.827E-08 15040 20230619_1885_Aki_TMTPro18x_K_F5 130.61 116.87 187810 141540 177510 200450 189530 221020 210380 222180 263460 253410 270450 290100 305430 261100 273040 343060 320450 315890 173490 130100 181520 197800 196670 221880 212580 227700 265680 255570 278810 291960 309140 274540 281220 341700 306110 300340 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 451470000 1084 4367 1037 1999;2000 1646;1647;1648 1646 3 9606 Homo sapiens -0.023297470782608798 AGPEYGQGMNPISR Oxidation (M) 1491.6776 0.67762659 478 Q9NUL3;Q4LE57;Q9NUL3-2;Q9NUL3-4;Q9NUL3-7;Q9NUL3-3;Q9NUL3-6;Q9NUL3-8;A0A024R7X7;Q2TBD5;E7EVJ4;E7EPX0;A8K276;E5RJN7;B7Z1P6;E7EVI1 STAU2;STAU2 variant protein Double-stranded RNA-binding protein Staufen homolog 2 yes no 0 1 0 5 0 1 39.653 39.743 2 0.080808 9413 20230619_1885_Aki_TMTPro18x_K_F5 49.35 42.967 6975.9 5022.5 5261.7 7032.9 6737.9 5280 5166.7 6648.5 5038.8 7372.8 7892.8 7453.7 8570 6807.7 7613.5 8917.4 6343.9 7801.5 6432.5 4616.7 5515.8 6912 6826.6 5508.6 5305.1 6715.5 5266.9 7407.1 7990.4 7546.3 8672.2 7155.7 7696.8 8861.4 6092.2 7416.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5910600 1085 478 1038 2001 1649 1649 294 1 9606 Homo sapiens -0.04854511953089968 AGPGTLSVTIEGPSK Unmodified 1412.7511 0.75110911 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 7 0 1 52.845 52.915 2 3.0169E-13 14878 20230619_1887_Aki_TMTPro18x_K_F7 199.68 181.41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1086 3299 1039 2002 1650 1650 1 9606 Homo sapiens 0.06124359761065534 AGPGVGAPR Unmodified 780.42424 0.42423608 722 A0A1U9X8D3;A0A1U9X8D1;A0A1U9X8C7;A0A1U9X8C1;A0A0G2JHC2;A0A024RCJ8;Q6NYC8;Q6NYC8-3;Q6NYC8-4 hCG_1821276;PPP1R18 Phostensin yes no 0 0 0 6 0.816 1 1 1 31.6 31.67 2 0.0082341 6405 20230619_1886_Aki_TMTPro18x_K_F6 88.35 27.562 20715 14055 22408 26653 46856 50538 36868 40552 42303 19589 24051 20339 22524 13607 26593 13183 28864 22655 19147 12974 23021 26154 46456 49028 37894 41522 41997 20983 25455 20402 23204 14279 27015 13825 27552 21440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18382000 1087 722 1040 2003;2004;2005 1651 1651 1 9606 Homo sapiens 0.025240932402766703 AGPGVVR Unmodified 654.38131 0.38130863 2536 Q15691;B4DM33 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes no 0 0 0 6.5 1.12 1 1 1 1 31.066 31.12 2 0.038846 5733 20230619_1887_Aki_TMTPro18x_K_F7 91.26 35.865 199260 107790 242760 236180 261700 307110 229710 273600 248890 208150 320590 367120 294260 274440 305730 146180 369780 342860 184190 99855 243220 228660 269510 304070 234350 280010 255050 218690 324770 361930 301860 279440 313280 160530 353000 323670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 210240000 1088 2536 1041 2006;2007;2008;2009 1652;1653;1654 1654 3 9606 Homo sapiens 0.040293231828513854 AGPILELEQWIDK Unmodified 1510.8031 0.80314468 2238 B2R6J3;Q96EY8;F5H4Z7;B4DHP4;S4R3P5 MMAB Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial yes no 0 0 0 7 0 1 65.616 65.641 3 0.0015087 20357 20230619_1887_Aki_TMTPro18x_K_F7 86.288 66.449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1089 2238 1042 2010 1655 1655 1 9606 Homo sapiens 0.06817523174800044 AGPIWDLR Unmodified 926.4974 0.49740102 2265;1680;3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PH35;A0A6Q8PEX7;A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2V5Q6;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 HNRNPR;HNRPR;DKFZp686A13234;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 7 0.816 1 1 1 54.723 54.792 2 0.0085178 15578 20230619_1888_Aki_TMTPro18x_K_F8 116.88 59.781 1627900 1477300 1566500 1614900 1531900 1848100 1778200 1726900 1723300 1790200 1669500 1683500 1896900 1599200 1905100 1993400 1926400 1897500 1505800 1353300 1596400 1623200 1601400 1848500 1777200 1774300 1757700 1802500 1726200 1711400 1929100 1673400 1938700 1991300 1842800 1803300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3500599999.9999995 1090 3254;1680;2265 1043 2011;2012;2013 1656;1657 1657 2 9606 Homo sapiens 0.03121221962896925 AGPLGPGPGDGCFTLPGHR Unmodified 1861.8894 0.8893507 2756 C9JJX6;E9PDC3;O00192-2;O00192 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome yes no 0 0 0 1 0 1 50.52 50.52 3 1.8459E-14 14590 20230619_1880_Aki_TMTPro18x_K_F1 148.44 141.61 29715 29612 29177 33133 30624 40180 37413 32068 36991 35506 38058 32936 40389 40348 35156 45147 40380 44870 27510 27125 29743 33261 31917 39901 37304 33428 37747 35649 39066 33846 40943 41608 36187 45247 38616 42604 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61248000 1091 2756 1044 2014 1658 1658 1 9606 Homo sapiens -0.007118402621472342 AGPQPLALQLEQLLNPR Acetyl (Protein N-term) 1899.0578 0.057796236 1692 A0A7P0TAR0;A0A7P0T868;Q9NY61;A0A7P0Z4N2;A0A7P0Z434;A0A087WTH8;A0A7P0TBG4;A0A087WW41 AATF Protein AATF yes no 1 0 0 8 0 1 68.441 68.461 2 0.043734 21293 20230619_1888_Aki_TMTPro18x_K_F8 65.574 30.16 836.58 0 0 1007.4 0 652.16 0 0 0 0 0 0 0 0 0 796.45 0 0 762.33 0 0 924.84 0 667.59 0 0 0 0 0 0 0 0 0 740.33 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1090900 1092 1692 1045 2015 1659 1659 1 9606 Homo sapiens 0.14422964923164727 AGPSAQEPGSQTPLK Unmodified 1466.7365 0.73652168 3273 O60271;O60271-4;O60271-2;O60271-9;B4DS36;Q5JB53;Q719J0;Q7Z5Q8 SPAG9;HLC4 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 0 5.5 0.5 1 1 42.228 42.317 3 0.053732 10481 20230619_1886_Aki_TMTPro18x_K_F6 43.166 27.41 111490 78811 110950 126960 133050 137830 127630 132330 157360 143320 157850 181730 177730 151920 173700 156590 185940 186390 103000 72572 113170 124310 136270 138390 129940 135870 158650 145450 162990 181640 180580 157960 177270 159020 177790 176720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191140000 1093 3273 1046 2016;2017 1660 1660 1 9606 Homo sapiens 0.02182287612890832 AGQAVDDFIEK Unmodified 1191.5772 0.57716749 3630 P52209-2;P52209;B4E2U0;K7EM49;K7EMN2;K7EPF6 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 3.38 0.992 2 2 3 1 54.727 54.758 2;3 1.5989E-06 16213 20230619_1882_Aki_TMTPro18x_K_F3 138.75 98.837 527470 440290 495980 491840 582510 658470 602600 581900 663880 555940 583510 529340 632720 517060 576070 680670 605090 595990 487560 403550 507780 494800 598950 651480 608210 598960 669460 562760 604290 538740 641410 542430 588970 676350 578600 567010 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2211700000 1094 3630 1047 2018;2019;2020;2021;2022;2023;2024;2025 1661;1662;1663 1662 3 9606 Homo sapiens -0.010958009444493655 AGQEFAR Unmodified 777.37695 0.37695154 4134 Q6UW63 KDELC1 KDEL motif-containing protein 1 yes yes 0 0 0 3 0 1 33.053 33.124 2 0.043952 6807 20230619_1882_Aki_TMTPro18x_K_F3 88.954 60.467 46169 29073 54895 55589 71922 74947 54904 71625 67444 37475 60589 76334 53634 54519 66913 29951 71099 66248 42697 26851 55285 54170 72865 74190 56788 72451 67608 40911 62319 74911 55657 55640 67825 32656 67953 62556 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22444000 1095 4134 1048 2026 1664 1664 1 9606 Homo sapiens -0.020641860307136994 AGQEHLLR Unmodified 922.49846 0.49846366 3968;1244 Q3KQV9;A0A087X226;A0A140VKC0;Q16222-2;Q16222-3;Q16222 UAP1L1;UAP1 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1;UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase no no 0 0 0 4.5 0.5 1 1 31.328 31.399 3 0.00070107 6184 20230619_1885_Aki_TMTPro18x_K_F5 110.38 72.564 366370 273220 356490 401810 451510 433050 421360 376580 466930 510310 519680 523400 564400 443080 413820 560330 574100 486630 338510 251240 364580 395390 460170 434330 427950 392370 475610 508960 532500 528000 567310 465940 433060 556680 547140 463310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 216500000 1096 3968;1244 1049 2027;2028 1665;1666 1666 2 9606 Homo sapiens 0.03411436331816731 AGQHSQAVADLQAALR Unmodified 1634.8489 0.84886609 1819 Q6PGP7;A0A8V8TMA8;A0A8V8TMB2;A0A8V8TLS3;A0A8V8TLT2;A0A8V8TNJ4;A0A8V8TLU2;A0A8V8TLT7;A0A8V8TLU5;A0A8V8TNK4;A0A8V8TN92;A0A8V8TLR0;A0A8V8TNK9;A0A8V8TNA2;A0A8V8TNJ9;D6RCE2 TTC37 Tetratricopeptide repeat protein 37 yes no 0 0 0 8 0 1 46.219 46.257 3 1.8536999999999998E-19 11991 20230619_1888_Aki_TMTPro18x_K_F8 157.8 93.09 62067 48509 58622 66925 62460 63289 67690 68864 73568 100250 105800 97197 104980 89765 88989 102370 97300 106240 57350 44566 59938 66014 64674 64413 68165 70801 76001 99486 106920 98569 106390 93521 91309 102850 93078 100830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 379410000 1097 1819 1050 2029 1667 1667 1 9606 Homo sapiens 0.05683561409773574 AGQLSQGAAEEDHGCR Unmodified 1684.7223 0.72234495 4652 Q9UBG0 MRC2 C-type mannose receptor 2 yes yes 0 0 0 2 0 1 31.949 32.01 3 5.4819E-11 6508 20230619_1881_Aki_TMTPro18x_K_F2 130.12 119.34 7481.2 14356 11748 8014.8 9184.2 11631 8480.3 13926 10320 13897 10238 11599 13208 10607 12120 10061 12819 9748.7 7008.4 13071 11518 8698 9727.3 11557 8672.9 14040 10434 13963 10648 11830 13330 10951 12368 10111 12237 9273.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7082000 1098 4652 1051 2030 1668 1668 1 9606 Homo sapiens -0.09262732877709823 AGQLSQGAAEEDHGCRK Unmodified 1812.8173 0.81730797 4652 Q9UBG0 MRC2 C-type mannose receptor 2 yes yes 0 0 1 3.5 0.5 1 1 32.959 33.023 4 2.5213E-09 6749 20230619_1883_Aki_TMTPro18x_K_F4 136.01 125.42 17349 11696 16367 14696 20131 18318 18698 16847 20682 22048 22134 24087 23765 20738 19568 28521 30511 29417 16017 10741 16749 14647 20546 18226 18996 17453 21032 22065 22723 24249 24021 21913 20624 28555 29080 27935 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20145000 1099 4652 1052 2031;2032 1669 1669 1 9606 Homo sapiens -0.0565879940652394 AGQMVTVWAAGAGVAHSPPSTLVWK Unmodified 2520.2947 0.29474882 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 0 0 6 0 1 62.144 62.195 3 2.434E-14 19099 20230619_1886_Aki_TMTPro18x_K_F6 143.29 133.63 31558 28059 35435 31925 24768 30102 35779 29966 38981 31493 33012 35824 33739 31682 28292 31020 37960 40689 29226 25716 35498 31921 26875 30578 35534 30693 39260 31895 34199 36012 34185 32783 29413 31718 36245 38535 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56959000 1100 1473 1053 2033 1670 1670 1 9606 Homo sapiens 0.09541323354414999 AGQPLQLLDASWYLPK Unmodified 1798.9618 0.96177059 1209 A0A140VJX3;P25325;P25325-2;Q2VEU1;B1AH49;Q59HD5;Q2VEU0 MPST 3-mercaptopyruvate sulfurtransferase;Sulfurtransferase yes no 0 0 0 3.5 0.5 1 1 64.797 64.818 3 2.4009E-11 20456 20230619_1882_Aki_TMTPro18x_K_F3 160.78 137.17 103540 101790 109330 110430 103860 111890 115590 121620 110520 149980 142150 140980 159810 145290 137880 182090 173400 181560 95905 93217 110500 110900 108550 113310 115800 124300 114350 149710 145120 143740 161590 151650 142800 182220 165620 172420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 439890000 1101 1209 1054 2034;2035 1671 1671 1 9606 Homo sapiens 0.0942481708309515 AGQPVYQQGR Unmodified 1102.552 0.55195579 1293 A0A1S5UZH2;Q8TDZ2;Q8TDZ2-4;Q8TDZ2-2;Q5TED7 MICAL1 Protein-methionine sulfoxide oxidase MICAL1 yes no 0 0 0 7 0 1 32.511 32.598 2 0.023759 6374 20230619_1887_Aki_TMTPro18x_K_F7 73.931 32.944 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1102 1293 1055 2036 1672 1672 1 9606 Homo sapiens 0.004781890436561298 AGQQGLSVAFDLATHR Unmodified 1669.8536 0.85361712 752 A0A0S2Z4X4;T1WHH0;A0A2S1PH13;A0A2S1PH16;B2R6K1;A0A2S1PH34;A0A2S1PH23;A0A2S1PH20;A0A2S1PH09;A0A024RD82;P22033;A0A2S1PH31;A0A2S1PH46;A0A0G3IFT0 MUT Methylmalonyl-CoA mutase, mitochondrial yes no 0 0 0 2 0 1 55.036 55.057 3 4.8859E-05 16602 20230619_1881_Aki_TMTPro18x_K_F2 95.662 82.706 32280 27673 29830 34924 33041 36534 36814 35183 43044 28796 29909 30748 32907 28754 36880 31689 35311 35505 29839 25391 30588 34688 34179 36787 37077 35879 42933 29534 31459 31066 33690 29885 37316 32029 33802 33682 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27232000 1103 752 1056 2037 1673 1673 1 9606 Homo sapiens 0.045484455525183876 AGQSAAGAAPGGGVDTR Unmodified 1441.691 0.69096847 3484 P21333;P21333-2;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3 FLNA Filamin-A yes no 0 0 0 3.5 0.5 1 1 33.057 33.114 2 1.0083E-05 6771 20230619_1883_Aki_TMTPro18x_K_F4 137.93 112 14987 8474.5 17263 14622 33637 43887 21508 26043 28375 20446 27962 33661 31406 25608 26709 12435 33714 30855 13848 7819.3 17585 14620 33380 41708 22608 27651 28488 21392 28893 33249 31715 26010 27543 13790 32169 29121 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18783000 1104 3484 1057 2038;2039 1674;1675 1675 2 9606 Homo sapiens -0.012209378494844714 AGQSVIGLQMGTNK Oxidation (M) 1418.7188 0.71876312 3933 Q15417;Q15417-3;Q15417-2;E9PDU6 CNN3 Calponin-3;Calponin yes no 0 1 0 2 0.816 1 1 1 46.182 46.234 3 0.00033855 12693 20230619_1881_Aki_TMTPro18x_K_F2 90.476 76.57 320040 261320 283080 308860 295890 309260 286910 266420 356200 300570 330500 275510 337350 258830 355430 331190 357720 283220 295640 239660 290920 308020 306160 311840 291970 276200 357790 301380 340300 280540 344770 271450 361060 329080 341730 269790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 425640000 1105 3933 1058 2040;2041;2042 1676 1676 2609 1 9606 Homo sapiens 0.026152490863978528 AGQSVIGLQMGTNK Unmodified 1402.7238 0.7238485 3933 Q15417;Q15417-3;Q15417-2;E9PDU6 CNN3 Calponin-3;Calponin yes no 0 0 0 2.5 0.5 1 1 51.784 51.836 3 1.5082E-08 14946 20230619_1882_Aki_TMTPro18x_K_F3 146.59 128.92 525890 445280 525360 482560 396960 463000 417540 447530 536860 330000 315010 247400 299180 229890 369060 351850 339470 228790 486370 407980 531430 484370 423460 469440 423810 455180 530710 337690 332650 254790 309110 244150 372290 344830 324320 219020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 421540000 1106 3933 1058 2043;2044 1677 1677 1 9606 Homo sapiens 0.03859552949029421 AGQTTYSGVIDCFR Unmodified 1573.7195 0.7194914 4002;2357 Q53GR7;Q9UJS0;Q9UJS0-2;B7Z2E2;B3KMV8;O75746-2;O75746 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 0 0 0 7.33 0.471 2 1 52.97 53.043 2 2.3722999999999997E-28 14847 20230619_1888_Aki_TMTPro18x_K_F8 304.89 285.13 69788 61539 70395 69325 61602 77034 76768 76301 72188 91058 75002 70218 116320 90024 64166 98343 76531 81850 64567 56396 71336 69505 65129 77291 76411 78374 74068 90593 78547 72931 114860 92692 67036 97681 73142 77897 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236630000 1107 4002;2357 1059 2045;2046;2047 1678;1679 1679 2 9606 Homo sapiens -0.04441956264577129 AGQVFLEELGNHK Unmodified 1440.7361 0.73612775 160 A0A024R1T5;P09543-2;P09543 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes no 0 0 0 6.5 0.5 1 1 55.679 55.747 3 6.2349E-07 16355 20230619_1886_Aki_TMTPro18x_K_F6 143.56 116.96 173920 149010 187300 199860 170270 200370 197480 200880 223890 230000 235210 227080 236850 211910 231170 264550 251210 280810 160960 136810 188990 197640 179010 202540 198440 205980 227100 230790 240840 230230 241500 221880 236480 265800 240370 266430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 380480000 1108 160 1060 2048;2049 1680;1681 1680 2 9606 Homo sapiens 0.03338912683716444 AGQVVTIWAAGAGATHSPPTDLVWK Unmodified 2532.3125 0.31250737 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;P02545-4;P02545-5;Q5TCI8;B4DFR3 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 3.5 0.5 1 1 62.229 62.246 3 6.026E-45 19349 20230619_1882_Aki_TMTPro18x_K_F3 237.32 222.39 324740 252770 303420 362060 357660 455910 463770 450400 554270 449050 378680 491020 469010 427330 398370 471540 455090 541580 300020 232330 311370 357710 370650 453430 463890 460410 552430 455380 401510 493960 472790 445220 409890 476850 435480 513340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342920000 1109 1428 1061 2050;2051 1682;1683 1682 2 9606 Homo sapiens 0.10764361880865181 AGRPQFDDQGK Unmodified 1217.5789 0.57889882 4228 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 1 5 0 1 36.073 36.165 3 0.00010123 7954 20230619_1885_Aki_TMTPro18x_K_F5 123.67 75.777 58584 41719 52465 54369 71169 69216 70136 67479 80970 66478 73755 72663 81911 63260 67835 75695 87257 70514 54080 38319 54093 54061 72365 68839 71085 69022 81557 67455 76351 73191 82650 66238 70332 75562 83183 67091 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65276000 1110 4228 1062 2052 1684 1684 1 9606 Homo sapiens -0.021187471358416587 AGRPQYDTK Unmodified 1034.5145 0.51450765 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 1 7 0.816 1 1 1 32.083 32.126 3 0.00071706 6148 20230619_1887_Aki_TMTPro18x_K_F7 119.75 93.642 91241 47260 135240 137530 206230 212090 141370 195160 152120 95696 170440 206880 142790 151260 190510 61441 199800 172950 84511 44046 134770 132250 206610 208220 146820 197730 154860 105440 173160 202870 149070 153050 192650 69886 190890 163180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 85560000 1111 3312 1063 2053;2054;2055 1685 1685 1 9606 Homo sapiens -0.0013690222197055846 AGSDGESIGNCPFSQR Unmodified 1680.7162 0.71619694 2612 B4DWC4;Q6FIC5;Q9Y696;Q9NVF8 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 0 0 3.5 0.5 1 1 43.19 43.245 2 3.4855999999999996E-52 10929 20230619_1883_Aki_TMTPro18x_K_F4 301.16 268.83 180220 127550 142500 104040 132540 92361 137370 136930 138440 196790 191860 187690 198180 163440 119850 316940 264500 202330 166220 116690 147420 107150 138240 95606 138380 138360 143380 195230 194470 190430 198480 177340 132320 308980 251240 193610 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 194830000 1112 2612 1064 2056;2057 1686;1687;1688 1688 3 9606 Homo sapiens -0.09693251109251833 AGSQVVATTAR Unmodified 1059.5673 0.5672715 4456 Q9BWH2 FUNDC2 FUN14 domain-containing protein 2 yes yes 0 0 0 7 0 1 33.478 33.559 2 0.0011818 6749 20230619_1887_Aki_TMTPro18x_K_F7 99.752 79.127 16520 9664.1 14622 19093 24329 29688 22424 27409 24705 12251 20692 21593 14883 13680 23661 7892.8 22998 16597 15233 8933.4 15191 18620 24479 29130 22791 27734 24821 13488 21188 21221 15799 14067 23778 8566.1 21966 15696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9005500 1113 4456 1065 2058 1689 1689 1 9606 Homo sapiens 0.03987055840843823 AGSSSLEAVR Acetyl (Protein N-term) 1017.5091 0.50908792 3083 H7BYY1;B7Z596;F5H7S3;Q1ZYL5;B7Z722;D9YZV7;P09493-5;A0A494BZZ2;H0YKJ4;H0YK48;H0YN06 TPM1 Tropomyosin alpha-1 chain yes no 1 0 0 1 0 1 39.973 39.973 2 0.0079058 10119 20230619_1880_Aki_TMTPro18x_K_F1 64.04 53.167 83769 60861 79121 79478 102310 94419 87485 81309 125820 71849 92628 81284 94443 85789 72479 91411 106570 107220 77369 55898 81081 78922 103980 94084 90213 83748 124500 73562 96558 82341 95377 88643 76071 92596 101640 101660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68659000 1114 3083 1066 2059 1690 1690 1 9606 Homo sapiens 0.0010337419556663008 AGSSTPGDAPPAVAEVQGR Unmodified 1765.8595 0.85949036 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 3.5 0.5 1 1 42.19 42.243 3 1.0069E-07 10524 20230619_1883_Aki_TMTPro18x_K_F4 116.13 107.64 77150 54024 81482 87042 88832 94360 84315 88838 104440 105260 130880 158960 136330 123430 111220 117510 155180 163420 71307 49750 82544 85237 91557 94704 85951 91601 106300 107120 133430 157600 137850 128170 115990 120740 148100 154700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139410000 1115 594 1067 2060;2061 1691;1692 1692 2 9606 Homo sapiens 0.007194992734866901 AGSTSWTGFQTK Unmodified 1269.599 0.59896556 430 A0A024R753;Q9NW13;Q9NW13-2 RBM28 RNA-binding protein 28 yes no 0 0 0 2.5 0.5 1 1 50.744 50.796 2;3 7.5475E-05 14435 20230619_1882_Aki_TMTPro18x_K_F3 115.33 100.45 22233 17621 20554 21114 21694 24150 25327 28065 24121 31018 29891 24434 32146 24319 29712 29089 25510 30077 20541 16164 21043 21085 22537 24280 25302 28458 24906 30969 30462 25117 32588 25367 30022 29213 24480 28540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19768000 1116 430 1068 2062;2063 1693;1694 1694 2 9606 Homo sapiens -0.02504996195852982 AGSVATCQAVMR Unmodified 1249.5907 0.59072584 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 0 8 0 1 39.18 39.167 2 0.0077483 9153 20230619_1888_Aki_TMTPro18x_K_F8 75.474 60.781 34007 23355 33814 41305 50645 57986 47073 45564 53666 22720 26637 25505 20002 22969 35058 28537 31109 25136 31412 21536 34673 40404 51198 57039 47836 46800 53118 24339 28337 25719 21397 24035 35129 28422 29762 23933 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18443000 1117 3337 1069 2064 1695 1695 1 9606 Homo sapiens -0.02408589708488762 AGSVELLGAMAYCAPK Unmodified 1636.7953 0.79529888 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 2 0 1 61.846 61.856 3 8.1034E-09 19404 20230619_1881_Aki_TMTPro18x_K_F2 142.1 127.85 71541 45951 66168 64963 56993 66455 74372 65750 73883 80509 69096 75302 84836 67542 64534 94121 90725 91428 66022 42264 67526 64061 60413 67048 73960 67640 75175 80404 71841 76416 85122 71361 67588 93907 86556 86864 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111090000 1118 2863 1070 2065 1696 1696 1 9606 Homo sapiens 0.0023730459138278093 AGTDPSHMPTGPQAASCLDLNLVTR Unmodified 2608.2374 0.23736987 4412 Q9BQG0;Q9BQG0-2;I3L1L3 MYBBP1A Myb-binding protein 1A yes no 0 0 0 7 0 1 55.165 55.226 3 9.231800000000001E-20 15849 20230619_1887_Aki_TMTPro18x_K_F7 152.96 144.48 10163 5466.7 6613.3 9283.8 7958.6 6962 10588 8845.7 9977.7 8002.4 7209.9 7663.7 10026 8854.2 7284.7 12496 8509.3 9760.7 9349.8 5044.4 7049.3 9024.7 8220.9 7259.1 10494 8893.2 10087 8126.5 7653.9 7846.6 10018 9281.3 7553.1 12330 8138.5 9295.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223390000 1119 4412 1071 2066 1697 1697 1 9606 Homo sapiens -0.002419317041130853 AGTEDEEEEEEGRR Unmodified 1634.6656 0.66560116 2312 B2RD51;O95456;O95456-2;F8WBH7 PSMG1 Proteasome assembly chaperone 1 yes no 0 0 1 1 0 1 28.516 28.516 3 4.5299E-37 5389 20230619_1880_Aki_TMTPro18x_K_F1 278.46 264.43 11463 4101.1 9704.5 10772 13677 18304 13143 13385 16215 11114 16576 20281 15650 15077 14197 9668 19399 18308 10549 3823.5 10076 10409 13912 17800 13375 13953 16334 11644 16973 19973 15949 15435 14722 10304 18503 17301 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77099000 1120 2312 1072 2067 1698 1698 1 9606 Homo sapiens -0.1263450195324367 AGTEDEEEEEEGRRETPEDR Unmodified 2361.9793 0.97928374 2312 B2RD51;O95456;O95456-2;F8WBH7 PSMG1 Proteasome assembly chaperone 1 yes no 0 0 2 1 0 1 30.514 30.514 4 1.2147E-45 6153 20230619_1880_Aki_TMTPro18x_K_F1 265.43 262.33 15955 16568 16919 17142 20823 19037 17194 17301 20607 19976 18037 18745 22401 18372 19486 24519 22918 19229 14785 15164 17160 17298 21193 19088 17656 17866 20717 20013 18824 19080 22586 19285 20081 24232 21869 18333 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183670000 1121 2312 1073 2068 1699 1699 1 9606 Homo sapiens -0.14722673491860405 AGTEPSDAIR Unmodified 1015.4934 0.49343786 3937 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 1.5 0.5 1 1 34.683 34.711 2 1.9585E-05 7584 20230619_1881_Aki_TMTPro18x_K_F2 160.69 58.068 161410 84611 139280 167580 158810 191060 167240 170820 206490 181120 234710 236170 226520 205080 194710 129740 265860 232680 148740 78264 143810 162530 163880 190770 169370 176210 209100 184240 239090 236000 230050 208670 202080 137610 253450 220030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232470000 1122 3937 1074 2069;2070 1700 1700 1 9606 Homo sapiens -0.013689123214930987 AGTFQAFEQFGQQLLAHGHYASPEIK Unmodified 2874.4089 0.40892695 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 3 0 1 63.215 63.245 4 5.1691E-49 19791 20230619_1882_Aki_TMTPro18x_K_F3 221.26 191.32 53042 47066 54709 52417 40020 44070 50695 46748 58742 56882 58186 58725 65663 54895 57131 58921 53347 67362 49085 43127 55197 52421 43020 45284 50767 47877 59367 57008 60054 59393 66353 56987 58051 59617 51176 63840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 431320000 1123 1022;3868 1075 2071 1701 1701 1 9606 Homo sapiens 0.04669884650184031 AGTGENAPWVVEDELVK Unmodified 1812.8894 0.8893935 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 0 3.5 0.5 1 1 61.4 61.416 3 3.2272E-09 18994 20230619_1882_Aki_TMTPro18x_K_F3 128.64 110.5 119600 91691 115400 121920 107680 133890 124510 130850 127870 133500 119270 141710 154500 134980 133000 165040 147460 160300 110510 84211 117520 120790 113020 134350 124720 133950 129850 135010 124490 143240 155590 141020 136600 165010 141040 152250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201170000 1124 4666 1076 2072;2073 1702 1702 1 9606 Homo sapiens 0.015464382188383752 AGTGVDNVDLEAATR Unmodified 1487.7216 0.72159989 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;A0A286YFA2;A0A286YFL2;A0A286YFM8;A0A286YFB2;A0A286YFC8;A0A286YER3 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 2.5 0.5 1 1 46.252 46.33 2 1.8961000000000002E-41 12451 20230619_1882_Aki_TMTPro18x_K_F3 309 283.38 464590 307850 368030 380330 337190 467910 343330 317520 355520 472770 653350 907580 542590 601930 724230 585970 734400 960180 428340 282700 381530 379170 353880 462860 346580 339320 373440 482400 653580 890120 566760 629700 733120 610440 704130 907190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 865120000 1125 1334 1077 2074;2075 1703;1704 1704 2 9606 Homo sapiens -0.002752042551037448 AGTHILCIK Unmodified 1011.5535 0.55353569 332 A0A024R5C5;P11498 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 2.5 0.5 1 1 44.472 44.55 3 0.00024944 11623 20230619_1882_Aki_TMTPro18x_K_F3 120.99 85.045 137400 122800 134400 155170 135130 128680 151600 146590 150650 197500 220810 216810 215180 183060 171400 236940 250410 242120 127100 112660 136890 153710 140550 132630 151950 149950 156470 197330 222920 218140 217770 192790 179780 237320 238770 229940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218910000 1126 332 1078 2076;2077 1705 1705 1 9606 Homo sapiens 0.04822106808046556 AGTQIENIEEDFR Unmodified 1520.7107 0.71070086 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;Q86TX4;G3V2N5;A0A804HJQ9;B4DRP5;A0A494C1A0;P35609;P35609-2;A0A804HI95;Q08043;B2R8Y4;A0A087WSZ2;B4DZQ2;B7Z4V1;G3V5M4;A0A804HKG0;A0A494C033;A0A804HIY0;A0A494C166;A0A494C0Q3;G3V380 ACTN1;ACTN2;ACTN3 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3 yes no 0 0 0 1.5 0.5 1 1 56.613 56.622 2 2.9512E-05 17083 20230619_1880_Aki_TMTPro18x_K_F1 127.56 107.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1127 387 1079 2078;2079 1706;1707 1706 2 9606 Homo sapiens -0.028826066294186603 AGTQIENIEEDFRDGLK Unmodified 1933.9381 0.93813461 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;Q86TX4;G3V2N5;A0A804HJQ9;B4DRP5;G3V5M4;A0A804HIY0;G3V380 ACTN1 Alpha-actinin-1 yes no 0 0 1 4 0.816 1 1 1 61.189 61.217 3 4.6364E-10 18924 20230619_1882_Aki_TMTPro18x_K_F3 143.86 111.31 311890 269960 295900 310230 222640 260270 337680 321720 319820 481230 426140 419580 514470 395380 381570 568630 462630 528910 288380 247460 300950 309510 240150 268470 333390 328710 331830 475560 435940 428060 515680 418030 395890 565790 442320 502540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 305520000 1128 387 1080 2080;2081;2082 1708;1709 1708 2 9606 Homo sapiens 0.008523067879195878 AGTVSPGKEDPVSSR Unmodified 1485.7423 0.74233534 4161 Q7Z2K8;Q7Z2K8-2 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes no 0 0 1 5.5 0.5 1 1 37.248 37.341 3 7.7857E-06 8429 20230619_1885_Aki_TMTPro18x_K_F5 116.79 105.52 35032 26872 36553 35917 26484 28106 35076 28121 30263 39401 51866 48769 41218 33781 49273 36034 47392 43374 32392 24681 36847 35430 28503 29021 34743 29075 31960 39471 51730 48563 42762 35468 49783 36632 45335 41134 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49365000 1129 4161 1081 2083;2084 1710;1711 1710 2 9606 Homo sapiens 0.018893861245715016 AGTVVLDDVELR Acetyl (Protein N-term) 1327.6983 0.69834526 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;Q8NHX6;A0A0S2Z492 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 1 0 0 1 0 1 62.766 62.766 2 3.5078E-24 19604 20230619_1880_Aki_TMTPro18x_K_F1 179.81 153.58 6315.2 5580.1 6152.4 6181.9 4447.5 5455.7 5450.6 5058.7 5926.9 5925 5361.8 7171.2 5992.9 5425.8 5063.6 9030.8 9273 8146.2 5841.2 5113 6237.6 6186.8 4786.4 5564.3 5455.3 5223.5 5991.2 5978.7 5567.6 7163.8 6061.3 5840.8 5419.1 8954.2 8823.9 7750.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225930000 1130 1104 1082 2085 1712 1712 1 9606 Homo sapiens 0.04760401698240457 AGTYFSNQAVR Unmodified 1212.5887 0.58873523 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 0 1.5 0.5 1 1 42.905 42.905 2 1.7923E-07 11203 20230619_1881_Aki_TMTPro18x_K_F2 152.54 129.9 28856 22020 21566 23552 28346 34993 27724 31037 38296 18428 21113 20733 23668 19166 25386 22137 27137 21619 26615 20181 22633 23815 28959 34416 28305 31625 37667 19411 22587 20911 24162 19981 25859 22182 25910 20559 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25246000 1131 1532 1083 2086;2087 1713;1714 1714 2 9606 Homo sapiens -0.00905559130455913 AGVAFFHLQDYDQAR Unmodified 1736.8271 0.82706802 2931 H0YDR3;E9PKV8;Q8N5M4 TTC9C Tetratricopeptide repeat protein 9C yes no 0 0 0 7.5 0.5 1 1 55.391 55.452 3 2.4314E-25 15956 20230619_1887_Aki_TMTPro18x_K_F7 229.23 215.52 81673 62662 78508 80662 63702 79582 65014 66336 99966 86514 83993 90699 96519 80213 84524 103000 91322 109170 75468 57530 79796 79957 67531 80236 66594 69251 99216 86537 87506 91524 97540 84314 86646 103430 87434 103560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309980000 1132 2931 1084 2088;2089 1715 1715 1 9606 Homo sapiens -0.011872433388134596 AGVAPLQVK Unmodified 881.53345 0.53345218 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 0 0 1.5 0.5 1 1 47.474 47.512 3 0.00058552 13274 20230619_1881_Aki_TMTPro18x_K_F2 109.86 76.066 157060 104310 120600 119460 206290 236770 180450 176160 241310 94104 79658 76179 90449 64241 134760 92390 102940 69308 144780 95717 126860 120910 207080 229060 185100 181850 235570 99303 89895 77838 94054 68187 134250 91245 98563 66197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196930000 1133 3484 1085 2090;2091 1716 1716 1 9606 Homo sapiens 0.08794679139748496 AGVDPLVPLR Unmodified 1035.6077 0.60767975 1456 C9JEV6;H7C3G9;A0A384N6G7;Q9UJ70;Q9UJ70-2;H0YE82;H7C1L7;H0YEB7 NAGK N-acetyl-D-glucosamine kinase yes no 0 0 0 7 0 1 52.768 52.838 2 0.0019617 14839 20230619_1887_Aki_TMTPro18x_K_F7 99.136 72.721 196470 161160 183990 220000 216440 231960 241740 246530 271190 258300 227300 217450 254090 219240 213790 277620 293740 270110 181580 148020 188660 217430 222900 233950 243130 251120 272960 259200 236370 222760 256700 229210 222850 277430 280120 256720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 62525000 1134 1456 1086 2092 1717;1718 1717 2 9606 Homo sapiens 0.09130022231261137 AGVEHQLR Unmodified 908.48281 0.48281359 1921 A3KFJ1;Q5QPD4;B4DX16;A3KFJ0;B2R6Z3;O14965 AURKA Aurora kinase A yes no 0 0 0 4 0.816 1 1 1 28.561 28.646 3 0.00057532 5028 20230619_1883_Aki_TMTPro18x_K_F4 133.12 56.059 14478 8751.9 17997 17594 18220 22994 17156 16616 22969 16047 17624 17026 22161 15969 17208 13217 20270 16193 13393 8091.1 17992 17092 18903 22671 17542 17403 22841 16301 18523 17198 22222 16381 17728 13509 19337 15364 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13116000 1135 1921 1087 2093;2094;2095 1719 1719 1 9606 Homo sapiens 0.024911498147503153 AGVGEPPEPGGRPEPGPR Unmodified 1754.87 0.86999547 3002 G1UI18;Q14997;F8WBH5 PSME4 Proteasome activator complex subunit 4 yes no 0 0 1 3.5 0.5 1 1 35.757 35.809 3 9.947E-14 7882 20230619_1882_Aki_TMTPro18x_K_F3 157.19 124.29 63282 49617 60467 67368 62907 68679 64811 62684 73834 68925 81543 66974 81120 67009 70834 78938 82887 74954 58479 45576 61732 66572 65209 69207 65534 64641 74990 69290 83173 68159 82306 69760 72916 78893 79134 71263 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118400000 1136 3002 1088 2096;2097 1720;1721 1720 2 9606 Homo sapiens 0.022755267186084893 AGVIFPVGR Unmodified 914.53379 0.53378653 3298;55 Q9P0M6;A0A024QZP6;A0A7I2V423;A0A7I2V412;Q9HA11;A0A7I2YQD6;A0A7I2YQR8;A0A7I2V6E9;A0A7I2V2N7;Q5SQT3;A0A7I2V4D9;A0A7I2YQB9;O75367;O75367-3;O75367-1;A0A8I5KRC6;B4DJC3;A0A994J4J7;D6RCF2 H2AFY2;H2AFY Core histone macro-H2A.2;Core histone macro-H2A;Histone H2A;Core histone macro-H2A.1 no no 0 0 0 3.5 0.5 1 1 51.832 51.878 2 0.00546 14962 20230619_1882_Aki_TMTPro18x_K_F3 108.24 66.736 2495700 2121300 2380200 2089500 2180900 2932800 2696700 2445600 3481800 1506700 1297200 1371000 1676500 1291400 1877000 1637600 1567500 1672900 2307400 1942100 2423600 2125600 2300500 2889900 2711400 2507200 3409500 1573500 1451800 1396200 1708500 1354000 1886700 1642800 1503500 1588200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1697699999.9999998 1137 55;3298 1089 2098;2099 1722;1723 1722 2 9606 Homo sapiens 0.07310098859613845 AGVLAGHDNR Unmodified 1008.5101 0.51009098 3730;1179;4542 Q6FHM2;P62879;E7EP32;P62879-2;Q9HAV0;A0A7I2S2S9;A8K3F6;A0A6Q8PG88;B4DLV5;B2R6K4;A0A140VJJ8;P62873;F6X3N5;A0A2L0WW42;P62873-2;A0A994J3T6;Q71UM6;B3KVK2;Q71UM7 GNB2;GNB4;GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 0 4.5 1.12 1 1 1 1 30.644 30.709 3 9.5525E-07 5781 20230619_1883_Aki_TMTPro18x_K_F4 139.39 102.81 278340 186210 296080 331960 399100 378380 344690 380610 431380 298470 393230 397020 383580 327850 379090 268760 448670 375530 257220 171750 300970 323620 404520 379040 353440 386420 432560 309240 404880 396130 391650 337430 388730 277430 428100 355820 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 2625700000 1138 3730;4542;1179 1090 2100;2101;2102;2103 1724;1725;1726;1727;1728 1725 5 9606 Homo sapiens 0.006176333551252355 AGVLAHLEEER Unmodified 1222.6306 0.63060004 148;3549 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 2.5 0.5 1 1 45.718 45.796 3 9.2352E-13 12213 20230619_1882_Aki_TMTPro18x_K_F3 187.42 166.86 106530 75900 92356 107090 104530 104890 118960 115370 170790 132130 128280 125020 140910 110830 135240 150380 132290 140410 98319 69775 95268 105530 108040 106480 120640 117590 169260 132500 134140 126810 143100 116920 137550 149880 126660 133440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1700799999.9999998 1139 148;3549 1091 2104;2105 1729 1729 1 9606 Homo sapiens 0.028189965580850185 AGVLAHLEEERDLK Unmodified 1578.8366 0.83657007 148;3549 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 1 5 0 1 49.108 49.185 4 0.073895 13358 20230619_1885_Aki_TMTPro18x_K_F5 37.013 19.467 117670 121660 111460 107410 116550 123240 125320 122760 196220 132350 130250 126110 145100 107110 131330 137240 139480 136730 108940 111210 113790 109990 121000 123530 127970 125690 193070 133200 137340 127690 146890 112790 134260 137390 133360 129880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 610900000 1140 148;3549 1092 2106 1730 1730 1 9606 Homo sapiens 0.07030524946708283 AGVMALANLLQIQR Oxidation (M) 1512.8446 0.84463234 4012 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 C14orf166 UPF0568 protein C14orf166 yes no 0 1 0 7 0 1 63.45 63.482 3 9.0796E-06 19407 20230619_1887_Aki_TMTPro18x_K_F7 117.79 101.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1141 4012 1093 2107 1731 1731 2650 1 9606 Homo sapiens 0.10872380662476644 AGVMALANLLQIQR Unmodified 1496.8497 0.84971772 4012 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 C14orf166 UPF0568 protein C14orf166 yes no 0 0 0 7.5 0.5 1 1 64.574 64.599 3 1.1020999999999999E-22 19786 20230619_1888_Aki_TMTPro18x_K_F8 237.68 206.61 34847 27189 32028 34002 29284 40293 38736 42809 43479 32936 32293 30355 38594 28811 35712 35227 32849 28244 32191 24953 32755 33866 30959 40296 38659 43275 43550 33749 33929 30904 39024 30120 36202 34915 31425 26917 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 301780000 1142 4012 1093 2108;2109 1732 1732 1 9606 Homo sapiens 0.12116684525108212 AGVNFSEFTGVWK Unmodified 1440.7038 0.70376498 3297 Q53FC3;O75340;A0A024QZ42;O75340-2 PDCD6 Programmed cell death protein 6 yes no 0 0 0 2 0 1 62.893 62.902 3 3.3291E-05 19943 20230619_1881_Aki_TMTPro18x_K_F2 93.348 77.592 54370 48623 65360 67110 62969 77606 65756 67391 74432 73686 79060 62980 74496 72373 85352 84657 72618 81538 50387 44649 65463 66372 65710 77409 66442 69711 75522 73838 80620 64833 76735 74966 85901 84709 69666 77445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136200000 1143 3297 1094 2110 1733 1733 1 9606 Homo sapiens 0.0010412528067718085 AGVNTVTTLVENK Unmodified 1344.7249 0.72489436 3722 P62424;Q5T8U3;Q9BY74;Q5T8U2 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 0 0 0 7 0 1 55.687 55.748 2 4.5095E-15 16025 20230619_1887_Aki_TMTPro18x_K_F7 240.8 191.39 65586 52305 63226 63296 54347 62050 75323 65983 66123 73712 63120 63400 77869 56313 66720 80722 62860 70148 60618 47984 64303 63026 57694 62933 74437 67370 67829 73742 65565 64604 78400 59655 67910 80091 60232 66712 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23085000 1144 3722 1095 2111 1734 1734 1 9606 Homo sapiens 0.06632090589550899 AGVNTVTTLVENKK Unmodified 1472.8199 0.81985737 3722 P62424;Q5T8U3;Q9BY74;Q5T8U2 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 0 0 1 2.5 0.5 1 1 53.103 53.149 3 1.523E-11 15565 20230619_1882_Aki_TMTPro18x_K_F3 171.67 135.94 358220 308130 329270 350600 325980 401630 350560 371180 437980 406090 362940 404410 476910 381030 339850 536570 497120 509820 331120 282430 337000 351320 340060 401520 354810 382160 438450 408610 381040 409970 476670 402130 357760 534550 474210 484470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1447200000 1145 3722 1096 2112;2113 1735;1736 1736 2 9606 Homo sapiens 0.10236024060736781 AGVQSGTNALLVVK Unmodified 1355.7773 0.77726428 92 A0A024R0H6;Q8N7H5-3;Q8N7H5-2;Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes no 0 0 0 2 0 1 54.155 54.182 3 0.006309 16244 20230619_1881_Aki_TMTPro18x_K_F2 67.234 45.362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1146 92 1097 2114 1737 1737 1 9606 Homo sapiens 0.11360673723152104 AGVRPSSSGSAWEACSEAPSK Unmodified 2119.9593 0.95928076 3821 Q6AWA4;Q12789;Q6AHZ7;Q12789-3 DKFZp686O0870;GTF3C1;DKFZp686A111 General transcription factor 3C polypeptide 1 yes no 0 0 1 7 0 1 41.823 41.894 4 0.045426 10072 20230619_1887_Aki_TMTPro18x_K_F7 47.392 38.46 19861 12258 16840 17554 18373 19560 20688 18022 25435 19191 22997 20728 21770 19708 22198 21829 20701 21450 18314 11279 17385 17314 19033 19588 20861 18559 25518 19398 23643 20952 22284 20468 22481 21886 19826 20375 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20942000 1147 3821 1098 2115 1738 1738 1 9606 Homo sapiens -0.05590051174795008 AGVSQVLNR Unmodified 942.52468 0.52467841 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 0 2 0 1 40.605 40.678 2 0.014998 10136 20230619_1881_Aki_TMTPro18x_K_F2 76.1 50.481 109850 92100 88764 102080 112630 122620 118190 122560 146370 100240 104090 99157 111520 91701 108050 108470 117490 107180 101430 84406 92369 102560 115330 122450 119660 124590 145710 102560 109090 100520 113430 95744 110450 108670 112250 101860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55350000 1148 2484 1099 2116 1739 1739 1 9606 Homo sapiens 0.051117055032818826 AGVSTNISTK Unmodified 976.51892 0.51892433 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPX4;A0A8V8TRC7;A0A3B3ITD8;A0A024RCC4;H0YDA1;A0A8V8TRD0;A8KA17;A0A8V8TQG5;P52948-3;P52948-4;A0A1D8GZ56;A0A142I7X2;A0A1D8GZ64;A0A8V8TPX8;A0A1D8GZ55 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 8 0 1 41.003 40.995 2 3.4696E-05 9893 20230619_1888_Aki_TMTPro18x_K_F8 168.74 103.7 17659 9842.9 18861 23650 30578 41090 24907 25760 26511 21685 31719 35649 25294 28267 29012 11657 34479 36894 16305 9132.4 19276 22925 30737 39822 25493 27264 27098 22577 32052 35256 26242 28523 29639 13454 32953 34765 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12307000 1149 1852 1100 2117 1740 1740 1 9606 Homo sapiens 0.029725622009436847 AGVVANDAGDR Unmodified 1043.4996 0.49958587 3817 Q0VDF9;H7C2A1;B4DYI5;Q6P155;B0YIZ1 HSPA14 Heat shock 70 kDa protein 14 yes no 0 0 0 2 0 1 33.618 33.675 2 2.2462E-08 7142 20230619_1881_Aki_TMTPro18x_K_F2 169.99 132.83 21394 12274 27110 30731 39848 42204 32709 37165 35530 27041 38203 45091 35029 36554 35141 19366 44891 41615 19790 11396 27276 29622 40160 41652 33494 38035 36110 28430 38983 44614 35909 37069 36176 21042 42834 39302 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20904000 1150 3817 1101 2118 1741 1741 1 9606 Homo sapiens -0.020423940899490844 AGVVGPELHEQLLSAEK Unmodified 1775.9418 0.94176342 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0 PLEC;PLEC1 Plectin yes no 0 0 0 5.5 0.5 1 1 52.225 52.302 3 2.0621E-13 14859 20230619_1886_Aki_TMTPro18x_K_F6 151.04 134.38 132930 109580 138010 136090 138710 165590 173900 165480 195820 170980 171640 172100 192630 150860 165800 183940 173330 177420 122960 100540 139820 135670 145050 165160 173930 169190 197230 172580 178160 173960 194570 158120 169590 183900 165800 168570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64936000 1151 3921 1102 2119;2120 1742;1743;1744 1743 3 9606 Homo sapiens 0.08483021352458309 AGVVTPGITEDQLWR Unmodified 1640.8522 0.85222014 1841 S4R3N9;A0A8V8TP06;B4DRS6;Q9BWM7;A0A8V8TM72 SFXN3 Sideroflexin;Sideroflexin-3 yes no 0 0 0 6 0 1 58.681 58.746 2 9.5371E-14 17605 20230619_1886_Aki_TMTPro18x_K_F6 185.25 146.95 36973 33077 35650 38948 36858 41080 51057 60794 60758 45085 42847 46233 53743 43435 48899 51015 44846 47008 34198 30323 36377 38909 38580 41822 50951 60277 60591 46441 45311 46802 54259 45302 49597 50920 42962 44683 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20479000 1152 1841 1103 2121 1745;1746 1745 2 9606 Homo sapiens 0.0574281146375597 AGVYPDK Unmodified 748.37555 0.37555455 2880 E5RHK8;H0YBC6;Q9UQ16-2;Q9UQ16-3;Q9UQ16;Q9UQ16-4 DNM3 Dynamin-3 yes no 0 0 0 5 0.816 1 1 1 40.285 40.36 2 0.083595 9659 20230619_1885_Aki_TMTPro18x_K_F5 72.234 11.272 232000 140230 301530 276130 288310 325230 263350 284660 230400 245040 375770 386380 326550 308980 326360 163770 401990 322790 214700 129600 300140 268150 299600 323950 266360 292600 242250 253960 376660 382870 334990 313580 335070 176440 383340 305200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 176700000 1153 2880 1104 2122;2123;2124 1747 1747 1 9606 Homo sapiens -0.008698201194761168 AGWNAYIDNLMADGTCQDAAIVGYK Acetyl (Protein N-term);Oxidation (M) 2774.2316 0.23161579 3400 P07737;CON__P02584 PFN1 Profilin-1 yes no 1 1 0 5 0.816 1 1 1 65.687 65.719 3 9.2108E-09 20452 20230619_1885_Aki_TMTPro18x_K_F5 59.678 56.58 84427 60731 68120 155650 153910 142260 154670 161180 140060 199590 207660 204740 211980 186380 114080 227260 198640 208830 77884 56351 72391 148890 152830 145190 155390 164380 146480 199650 209900 207030 211630 194960 123030 226350 189310 198500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 427260000 1154 3400 1105 2125;2126;2127 1748;1749 1748 2010 2 9606 Homo sapiens -0.08453075006491417 AGYAGEDCPK Unmodified 1066.439 0.43895945 3368;3332 Q6FI97;Q53FS0;O96019;H7C5S0;O94805 BAF53A;ACTL6A;ACTL6B Actin-like protein 6A;Actin-like protein 6B no no 0 0 0 3 0 1 38.191 38.245 2 2.1716E-05 8852 20230619_1882_Aki_TMTPro18x_K_F3 159.58 131.41 62918 30401 85230 81890 118670 161710 82989 108390 91733 74888 135290 154950 131040 123170 121310 53424 141260 136260 58201 28296 85231 79360 119860 156020 86148 113430 94588 79957 136700 152420 133460 124430 124230 59698 134930 128560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42474000 1155 3368;3332 1106 2128 1750 1750 1 9606 Homo sapiens -0.09160247464569693 AGYEYVSPEQLAGFDK Acetyl (Protein N-term) 1814.8363 0.8362953 2743 C9JAG1;G1UI38;Q8WU57;C9J9I1;Q9C0D9 EPT1;SELI Ethanolaminephosphotransferase 1 yes no 1 0 0 3.5 1.12 1 1 1 1 64.203 64.226 3 2.5263E-05 20096 20230619_1883_Aki_TMTPro18x_K_F4 68.919 63.105 18191 17828 17570 20343 17787 18635 20922 20531 21987 21623 20721 26766 29610 20478 25450 27582 23735 23886 16837 16334 17920 20320 18532 19026 20947 20881 22303 21943 21753 26713 29705 21717 25869 27393 22727 22725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120890000 1156 2743 1107 2129;2130;2131;2132 1751 1751 1 9606 Homo sapiens -0.03852939563807922 AGYGAGVGGGYR Unmodified 1083.5098 0.50975662 3811 Q08211;B3KU66;Q08211-2 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 8 0 1 37.931 37.917 2 4.2454E-12 8642 20230619_1888_Aki_TMTPro18x_K_F8 174.69 169.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1157 3811 1108 2133 1752 1752 1 9606 Homo sapiens -0.028657863647140402 AGYIIPLQGPGLTTTESR Unmodified 1872.9945 0.99452728 532 A0A024R8Q1;P10253 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase yes no 0 0 0 2 0 1 60.112 60.124 3 9.7685E-14 18669 20230619_1881_Aki_TMTPro18x_K_F2 152.94 108.64 34052 32523 36986 43424 35355 39745 40035 35492 45272 45268 44151 48138 43950 41565 48647 44561 45041 54465 31543 29847 37343 42892 36977 40371 40255 36848 45791 45320 45387 48485 45108 43248 49166 45301 43195 51592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169500000 1158 532 1109 2134 1753 1753 1 9606 Homo sapiens 0.09294979415267335 AGYITPVPGGVGPMTVAMLMK Unmodified 2089.0774 0.077410744 1651 A0A7I2V2U6;B2R7W0;P13995;P13995-2;B8ZZU9;A0A7I2V482;B4DY35;B9A062 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes no 0 0 0 6 0 1 65.12 65.165 3 2.0073E-16 20389 20230619_1886_Aki_TMTPro18x_K_F6 155.94 137.16 37179 35833 41701 34913 26490 33207 34241 33595 37108 54933 43886 59100 52279 41149 58897 54184 62145 65682 34452 32788 41715 35357 28946 33740 34202 34870 38012 54452 45207 59111 53387 43761 59926 54893 59453 62250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93741000 1159 1651 1110 2135 1754 1754 1 9606 Homo sapiens 0.07643513555740356 AGYPQYVSEILEK Unmodified 1495.7559 0.75586013 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 7 0 1 62.218 62.253 3 5.5739E-06 18696 20230619_1887_Aki_TMTPro18x_K_F7 101.53 80.869 130820 122880 135300 138040 120770 135980 139560 139710 145010 157950 157430 169060 182980 151760 163280 198590 168240 199920 121110 112580 136860 138190 127080 137780 139860 142980 148020 158960 162160 170570 184970 159610 166860 198770 161150 189750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1360800000 1160 1723 1111 2136 1755 1755 1 9606 Homo sapiens 0.027812439037916192 AGYSQGATQYTQAQQTR Unmodified 1857.8606 0.86055299 2331 B2RNR6;Q96KR1;A8K849 ZFR Zinc finger RNA-binding protein yes no 0 0 0 7.5 0.5 1 1 37.481 37.506 3 6.4396E-30 8461 20230619_1888_Aki_TMTPro18x_K_F8 220.49 205.46 13752 10870 11990 14046 16692 18149 18098 14988 17748 16182 19175 18358 18536 15646 18135 18623 20227 20515 12700 9979.3 12413 13971 17000 17968 18143 15571 18150 16362 19576 18453 18919 16389 18566 18772 19335 19464 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100130000 1161 2331 1112 2137;2138 1756 1756 1 9606 Homo sapiens -0.03406286357585486 AHAAVWNAQEAQADFAK Unmodified 1826.87 0.86999547 2670 B7SBB1;O00170;D0EKE4;A5JGZ4;A0A804HKH9;D0EKE6;D5LTB3;C8CK04;C8CHN4;C0JXB8;D0EKE5;C8CK05;D2CVN5;E9PMH2;A0A804HKK3;A0A804HKL7;A0A804HJ46;A7YDK6;A7YDK7;A3RDR7;A3RDR6 AIP AH receptor-interacting protein yes no 0 0 0 6.5 0.5 1 1 48.855 48.937 3 9.8416E-19 13422 20230619_1886_Aki_TMTPro18x_K_F6 186.42 180.6 165160 105210 169990 179740 171660 169510 191310 188130 201590 201960 209100 217140 213390 183940 211480 212580 193980 238990 152540 97002 172340 175180 178500 172560 192110 191320 205130 203790 214470 218590 217540 192380 214140 214650 186080 226550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 273540000 1162 2670 1113 2139;2140 1757;1758 1758 2 9606 Homo sapiens -0.010364732813968658 AHACPAVEETPMNVR Oxidation (M) 1696.7661 0.76612402 3860 Q13585 GPR50 Melatonin-related receptor yes yes 0 1 0 3 0 1 33.439 33.504 3 0.00065725 6973 20230619_1882_Aki_TMTPro18x_K_F3 77.372 71.34 8753.7 5323.9 13159 23255 24525 26800 23585 18767 23277 13146 16514 19043 18078 17693 17333 13777 22354 22076 8115.1 5015.5 13240 21990 24527 26607 23794 19606 23430 13796 17353 19011 18390 18087 17893 14385 21338 20881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40636000 1163 3860 1114 2141 1759 1759 2538 1 9606 Homo sapiens -0.054388397049478954 AHACPAVEETPMNVR Unmodified 1680.7712 0.7712094 3860 Q13585 GPR50 Melatonin-related receptor yes yes 0 0 0 3.5 0.5 1 1 37.857 37.905 3 1.22E-10 8680 20230619_1883_Aki_TMTPro18x_K_F4 154.86 149.78 31844 23781 33190 41732 50014 59153 49183 46986 57513 35370 44251 40529 40224 39371 42305 40548 54253 40014 29439 21919 33922 40842 50629 58166 49861 48533 57507 36585 45833 40906 41338 40683 43624 40713 51695 38064 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125100000 1164 3860 1114 2142;2143 1760 1760 1 9606 Homo sapiens -0.04194535842316327 AHADDELAALR Unmodified 1180.5836 0.58364985 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 1.5 0.5 2 2 40.136 40.171 2;3 5.7621E-09 10183 20230619_1880_Aki_TMTPro18x_K_F1 157.38 118.81 100700 63790 78849 95765 104410 112000 123850 121030 152270 140960 120480 131130 155330 131010 113920 162490 138720 133160 92818 58717 82425 94254 107010 112200 124530 123520 152300 141130 126670 133560 155490 136780 118200 161010 132440 126810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 685780000 1165 2830 1115 2144;2145;2146;2147 1761;1762 1761 2 9606 Homo sapiens 0.0005813700693124702 AHADHIGQGFER Unmodified 1336.6272 0.627246 4124 Q6PCB5-2;Q6PCB5;H7C2D3;C9JM20 RSBN1L Round spermatid basic protein 1-like protein yes no 0 0 0 3.5 0.5 1 1 30.512 30.592 4 2.5025E-05 5785 20230619_1883_Aki_TMTPro18x_K_F4 127.78 89.374 35018 20421 32680 33799 35208 39973 40365 36504 42114 45163 45927 49424 46820 37517 35119 43603 44586 44743 32305 18828 33442 33095 36517 39851 40449 37773 42976 45299 46990 49547 47188 39423 36486 43762 42569 42484 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53128000 1166 4124 1116 2148;2149 1763 1763 1 9606 Homo sapiens -0.02760253495921461 AHAHLDTGR Unmodified 976.48388 0.48387622 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 3.5 0.5 1 1 22.974 23.083 3 4.9185E-06 3748 20230619_1883_Aki_TMTPro18x_K_F4 158.87 133.49 83800 38420 89945 99491 137440 120350 118490 142850 141240 78468 135310 157370 105350 111830 124030 63626 138870 130370 77322 35742 91600 95631 138250 120560 121300 142600 142060 85180 137970 154510 109510 114240 126260 68673 132670 123150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108260000 1167 3900;2497 1117 2150;2151 1764 1764 1 9606 Homo sapiens -0.005306358163352343 AHAHLDTGRR Unmodified 1132.585 0.58498725 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 1 7 0 1 22.909 23.004 3 0.011688 3645 20230619_1887_Aki_TMTPro18x_K_F7 68.525 49.394 23991 12866 19123 25231 30044 25263 24263 27586 26616 24303 32404 28278 26230 24581 28468 21085 32481 30529 22099 11898 20020 24438 30139 25596 24882 27929 27199 24854 32680 28409 27088 25297 29087 21800 31025 28903 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6963700 1168 3900;2497 1118 2152 1765 1765 1 9606 Homo sapiens 0.023998158863605568 AHCIQQMTSK Oxidation (M) 1218.5485 0.54852667 3014 X5DNA9;G3XAH0;Q7KYV2;Q59GE1;Q99648;Q99719;C9JM82;B4DJ62 SEPT5;CDCrel-1 Septin-5 yes no 0 1 0 8 0 1 31.451 31.462 3 0.034628 6129 20230619_1888_Aki_TMTPro18x_K_F8 47.559 34.983 25233 13064 20359 20715 25743 26198 21428 24078 31716 22261 23972 25993 23693 18712 22977 22667 28808 24437 23242 12046 21162 20354 26214 26021 22176 24686 31396 22724 24959 25963 24158 19758 23694 22817 27476 23208 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11427000 1169 3014 1119 2153 1766 1766 1775 1 9606 Homo sapiens -0.05200565116888356 AHDGSVFTLCQMR Unmodified 1520.6864 0.68641714 4548 Q9HC35;B5MBZ0;Q9HC35-2;B6EXY3;C1PHA1;J7MA22 EML4;EML4-ALK variant 7;EML4-ALK Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 0 7.5 0.5 1 1 45.648 45.711 3 4.7331E-09 11779 20230619_1888_Aki_TMTPro18x_K_F8 168.82 157.77 58660 36504 57058 64876 55464 62398 57601 58256 67453 61141 59490 71542 67120 54959 64839 62958 69257 69294 54148 33679 58113 63099 57819 63147 58277 59905 67852 61956 61838 71538 68145 57673 66204 63504 66222 65749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52183000 1170 4548 1120 2154;2155 1767 1767 1 9606 Homo sapiens -0.05309861588239073 AHDQLLDLK Unmodified 1051.5662 0.56620887 4093 Q68DQ2;Q6ZNP1 CRYBG3 Very large A-kinase anchor protein yes no 0 0 0 5 0 1 46.723 46.8 3 0.036397 12397 20230619_1885_Aki_TMTPro18x_K_F5 54.259 28.321 33899 22197 32139 28878 32624 37335 32107 37412 44512 42007 39774 36055 40711 35756 37573 42838 37712 38942 31293 20395 32780 28735 33873 37105 32805 38303 44464 42036 41043 36877 41378 37264 38300 42705 36090 37024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42764000 1171 4093 1121 2156 1768 1768 1 9606 Homo sapiens 0.04248841471940068 AHEAALEAR Unmodified 966.48829 0.4882929 1790 K7EKH8;B4DG07;A0A8J9C065;X6RM00;G8JLD3;X6RLX0;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;A0A8I5KS52;Q8IUD2-5 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes no 0 0 0 2 0 1 27.692 27.768 3 0.00061935 4886 20230619_1881_Aki_TMTPro18x_K_F2 96.143 53.06 12292 10442 13711 13150 17968 16267 17865 15912 17980 15783 18206 15884 17482 14016 16551 11389 17581 18925 11380 9580.5 13869 13101 18286 16214 18017 16279 18313 15964 18624 16054 17814 14399 16874 11926 16820 17890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20550000 1172 1790 1122 2157 1769 1769 1 9606 Homo sapiens 0.003708286065716493 AHEAQDAGYR Unmodified 1116.4948 0.49483484 1092 A0A0S2Z4B5;Q08209;A0A0S2Z4C6;Q08209-2;Q08209-3;E7ETC2;Q08209-5;Q9UMM5;Q5F2F8;P16298-4;P16298-2;P16298-3;P16298;P48454-3;P48454;P48454-2;G3V111;H0YC26;H0YB04;E5RJH4 PPP3CA;PPP3CB;PPP3CC Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform yes no 0 0 0 1.5 0.5 1 1 23.165 23.2 3 0.07138 3870 20230619_1880_Aki_TMTPro18x_K_F1 41.399 23.535 3023.1 1485.9 3571.9 2561.1 3892.5 4362.1 3797 3006.4 2750.2 2103.6 4595.2 4116 2958.2 4950.7 4191.3 2152.6 6655.6 3765.4 2792.6 1372.1 3581.7 2521 4011 4240.8 3803 3143.3 2926.9 2239.5 4555.8 4116.8 3148.7 4920.8 4363.3 2307.1 6324.2 3569.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36248000 1173 1092 1123 2158;2159 1770 1770 1 9606 Homo sapiens -0.05875278232724668 AHEGEIEDLALGPDGK Unmodified 1649.7897 0.78967946 2113 B5MC98;A8K813;Q9HCU5;Q05DB2 PREB Prolactin regulatory element-binding protein yes no 0 0 0 1.5 0.5 1 1 49.805 49.834 3 0.00022914 14378 20230619_1881_Aki_TMTPro18x_K_F2 88.768 69.946 43952 24679 38735 47160 40023 38024 46014 44919 54616 63395 49523 49411 60088 48371 46046 61146 59571 65220 40522 22806 39846 45622 41604 39289 46308 45913 55032 62638 51499 50743 60321 50647 47900 61418 56906 61882 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188440000 1174 2113 1124 2160;2161 1771 1771 1 9606 Homo sapiens -0.009223793951150583 AHEILPNLVCCSAK Unmodified 1610.7909 0.79088221 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 1.5 0.5 1 1 50.066 50.118 3 4.5847E-05 14550 20230619_1881_Aki_TMTPro18x_K_F2 101.62 81.884 325960 195960 351210 357560 209930 313130 374770 349050 413770 369310 380350 423940 397680 377270 300110 517970 471880 497100 301100 180890 352730 347060 234200 320370 369570 354860 417710 373870 392760 426480 401190 397880 317590 516380 450000 472280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 768080000 1175 3621 1125 2162;2163 1772;1773 1773 2 9606 Homo sapiens 0.009918401684672062 AHEQALAELTK Unmodified 1209.6354 0.63535107 1304 Q15477;A0A8V8TLC0;A0A1U9X8J0;A0A1U9X8J1;A0A1U9X8J2;A0A1U9X8J6;Q96BC0;O76046;Q9NPK3;A0A8V8TL97;H7C4L3;H7C5N0;A0A8V8TLA2;B4E0N1;B4DM01;A0A8V8TN04;A0A1U9X8I7;A0A1U9X8I9;B4DSY1;Q59F56;A0A024RCU1;A0A8V8TLR3 SKIV2L;SKI2W Helicase SKI2W yes no 0 0 0 4.5 0.5 1 1 43.384 43.446 3 0.00023229 11019 20230619_1885_Aki_TMTPro18x_K_F5 101.89 67.998 46461 22041 40732 44259 49342 46876 55850 49568 64295 49615 61395 60054 67086 51941 52366 54254 58300 57407 42804 20404 42003 42871 50703 47244 56165 50478 64845 50485 63351 60227 67551 53988 53844 54664 55718 54495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212940000 1176 1304 1126 2164;2165 1774 1774 1 9606 Homo sapiens 0.03891880700825823 AHFPGPVTR Unmodified 980.5192 0.5191991 2715 B7ZMD6;Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes no 0 0 0 2 0 1 35.68 35.736 3 0.00069067 7973 20230619_1881_Aki_TMTPro18x_K_F2 88.267 68.48 62172 79455 70623 53078 63454 70942 80678 74375 111430 57407 71388 86397 80186 139660 60389 65918 169320 145480 57755 72464 70837 56166 66969 70556 81252 75300 109970 60011 75592 88141 81272 138210 67768 71886 160780 137420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59973000 1177 2715 1127 2166 1775 1775 1 9606 Homo sapiens 0.028160267114799353 AHFQNFPNGVTDFIK Unmodified 1733.8526 0.85255449 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;A0A7P0T944;A0A7P0T9C0;B4DSC0;E7EW37 TNPO1 Transportin-1 yes no 0 0 0 2 0 1 57.586 57.601 3 1.5068E-10 17646 20230619_1881_Aki_TMTPro18x_K_F2 151.3 132.68 52941 31965 48156 52174 48251 52722 50422 50935 57612 58502 56037 56899 65756 51565 63742 62353 60836 68475 48836 29461 49337 51008 50185 53206 50952 52366 58258 58670 58013 57653 66671 53974 64686 62832 58288 64945 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92243000 1178 629 1128 2167 1776 1776 1 9606 Homo sapiens 0.01498231183563803 AHFTIWDK Unmodified 1016.508 0.50796571 4631 Q9NYK5-2;Q9NYK5 MRPL39 39S ribosomal protein L39, mitochondrial yes no 0 0 0 1 0 1 50.507 50.507 3 0.00029636 14543 20230619_1880_Aki_TMTPro18x_K_F1 136.8 98.711 43764 24900 40401 51965 48906 47767 47650 51213 46062 46786 47090 45453 46693 38112 36952 45734 43133 43634 40364 23042 41509 50140 50037 48668 48085 51967 47081 47460 48230 45962 47195 39965 38137 45696 41213 41464 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22794000 1179 4631 1129 2168 1777 1777 1 9606 Homo sapiens 0.0003720461731973046 AHGFTFTR Unmodified 935.46135 0.46134987 699 P08559-4;P08559-2;P08559;Q5JPU2;P08559-3;A0A024RBX9;Q53GE3;Q5JPU0;Q5JPU1;Q5JPT9;A0A8Q3WLI8;A0A8Q3WLK5 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha yes no 0 0 0 2.5 0.5 1 1 37.441 37.498 3 0.00072667 8672 20230619_1881_Aki_TMTPro18x_K_F2 110.12 89.218 179770 112610 171500 206020 208830 218690 228990 224670 260920 212870 253940 252240 242430 220090 236680 249930 284080 250290 165920 103940 175690 200360 214430 220180 230650 228840 263510 217040 260380 253280 247670 229560 243450 250690 271110 237850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184560000 1180 699 1130 2169;2170 1778;1779 1778 2 9606 Homo sapiens -0.00896235213951968 AHGGYSVFAGVGER Unmodified 1405.6739 0.67386184 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079;F8W0P7;H0YI37 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 7.5 0.5 1 1 42.496 42.499 3 2.842E-13 10269 20230619_1887_Aki_TMTPro18x_K_F7 167.05 136.31 55121 42654 56589 62787 60683 64213 69051 70541 73668 68351 90320 106070 69422 58491 78941 70840 84836 83764 50963 39218 57466 61756 62897 64953 69299 71589 75380 70290 91093 104280 71960 62539 80386 71744 81106 79426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 448050000 1181 3391 1131 2171;2172 1780;1781 1780 2 9606 Homo sapiens -0.012748136646223429 AHGLLAEENR Unmodified 1108.5625 0.56252048 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;H0YFY6;Q96HN5;K4DIE0;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 3 0.816 1 1 1 33.384 33.444 3 3.7189E-20 6925 20230619_1882_Aki_TMTPro18x_K_F3 225.66 171.89 145720 84336 136730 163530 204600 191970 203700 204890 240760 164360 206400 218930 218250 194190 189750 215450 236490 204950 134430 77941 140820 158860 206900 192180 206480 207330 241530 170060 213970 219030 221140 202140 196160 215540 225600 194890 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 520630000 1182 349;3906 1132 2173;2174;2175 1782;1783;1784;1785 1783 4 9606 Homo sapiens 0.012581716980776037 AHGNSGMVR Oxidation (M) 943.4294 0.42939781 2764 C9K025;P18077 RPL35A 60S ribosomal protein L35a yes no 0 1 0 6 0.816 1 1 1 22.946 23.014 3 0.048035 3776 20230619_1886_Aki_TMTPro18x_K_F6 44.377 13.874 10775 6634.4 14399 15302 21549 21782 16797 20422 18742 7784.7 10411 10656 6164.6 9545.4 11704 7155.8 12767 10871 9975.3 6147.6 14436 14808 21665 21486 17275 20606 18616 8648.3 10901 10657 6726.6 9740.4 11836 7453.7 12192 10293 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13143000 1183 2764 1133 2176;2177;2178 1786 1786 1647 1 9606 Homo sapiens -0.044579709593904226 AHGQDLGTAGSCLR Unmodified 1441.6732 0.67320991 1513 A9LSU1;A0A3B3ISV3;A0A6G9EL94;Q59F15;P02462;A0A0A0U994;A7MBN3;P29400;P29400-2 COL4A1;COL4A5 Collagen alpha-1(IV) chain;Arresten;Collagen alpha-5(IV) chain yes no 0 0 0 5.5 0.5 1 1 33.932 33.998 3 2.9668E-16 7258 20230619_1886_Aki_TMTPro18x_K_F6 166.86 155.96 16107 7993.2 13812 13864 22160 23966 15394 16416 20171 14750 17563 18541 14097 13083 16069 12923 17907 19073 14840 7381.3 14344 13636 22188 23284 16062 17239 20162 15125 18000 18455 14602 13669 16389 13343 17123 18046 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36670000 1184 1513 1134 2179;2180 1787 1787 1 9606 Homo sapiens -0.029959763759734415 AHIAQLCEK Unmodified 1068.5386 0.53861391 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;A0A087WX41;P53675-2;P53675;A4FU99 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 0 7.5 0.5 1 1 39.36 39.385 3 3.2765E-06 9002 20230619_1887_Aki_TMTPro18x_K_F7 148.94 123.32 755440 301530 583140 604850 661550 578590 745190 736360 858960 641880 646000 516380 575430 475640 535910 699610 631180 508640 694980 279480 607860 585320 682510 590520 749760 738750 859420 650170 668830 529370 587770 503700 551790 688300 602140 485580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1408000000 1185 826 1135 2181;2182 1788;1789 1788 2 9606 Homo sapiens 0.007086149400493014 AHIVFDFHQAADGIQEQQR Unmodified 2209.0665 0.066463441 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 0 0 5.5 0.5 1 1 49.411 49.488 4 5.3547E-73 13668 20230619_1886_Aki_TMTPro18x_K_F6 335.98 324.33 64598 35202 49775 55579 53542 58110 69597 63688 76313 72183 70017 68682 82439 68972 68710 79804 68074 80720 59494 32448 51898 54467 55773 58672 69416 64914 77119 72403 72665 69910 83077 71726 70141 80044 65227 76612 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334870000 1186 351 1136 2183;2184 1790 1790 1 9606 Homo sapiens 0.01029286821722053 AHLGALLSALSR Unmodified 1207.7037 0.70370541 2687 H0YB35;F8W6L0;E7ERK1;B7Z9G3;B7Z405;F5GXT2;Q2NL74;B7ZL55;O43374-2;O43374;C9J798 RASA4;RASA4B Ras GTPase-activating protein 4;Putative Ras GTPase-activating protein 4B yes no 0 0 0 7 0 1 56.447 56.505 3 0.061256 16367 20230619_1887_Aki_TMTPro18x_K_F7 41.401 19.894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1187 2687 1137 2185 1791 1791 1 9606 Homo sapiens 0.10816170071370834 AHLGQFPGHNEFFR Unmodified 1655.7957 0.79570831 2445 C9JEZ4;B3KY59;Q9UKI2 CDC42EP3 Cdc42 effector protein 3 yes no 0 0 0 2 0 1 45.537 45.619 4 3.3826E-16 12400 20230619_1881_Aki_TMTPro18x_K_F2 200.16 193.59 57749 33694 57643 56586 66552 56503 60867 68085 87225 80197 63281 67075 70442 65581 55323 84489 66315 67044 53302 31072 58666 55257 68184 57423 62522 69039 86465 80015 66368 68627 71010 68657 57293 83543 63349 63861 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97399000 1188 2445 1138 2186 1792 1792 1 9606 Homo sapiens -0.0059577158228876215 AHLGTALK Unmodified 809.47594 0.4759373 2062 D6RD47;A8K517;P62266;D6RDJ2;D6RIX0;D6R9I7 RPS23 40S ribosomal protein S23 yes no 0 0 0 2 0.816 1 1 1 38.28 38.318 3 0.00011482 9006 20230619_1881_Aki_TMTPro18x_K_F2 164.72 74.972 883100 311910 635110 734830 954680 838980 882230 922380 1272500 460720 463500 381840 508640 412690 483540 549290 565860 411510 811780 290200 670950 707950 964060 841960 904890 923990 1239500 489540 515030 393290 516920 431860 496970 541940 539550 392880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1964699999.9999998 1189 2062 1139 2187;2188;2189 1793;1794;1795 1795 3 9606 Homo sapiens 0.06357836934182615 AHLLDNTER Unmodified 1067.536 0.53597137 1880 A0A994J5N6;Q96AJ9-1;Q96AJ9 VTI1A Vesicle transport through interaction with t-SNAREs homolog 1A yes no 0 0 0 2.5 0.5 1 1 34.384 34.443 3 1.6351E-06 7361 20230619_1882_Aki_TMTPro18x_K_F3 163.32 144.22 64760 23211 55059 64724 79589 72506 67291 73314 80805 57280 76652 70176 62352 63216 63983 57290 72608 65072 59598 21668 57142 61963 80321 72696 68985 74403 81292 59179 78172 70451 64244 65080 65469 58139 69336 61750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78154000 1190 1880 1140 2190;2191 1796 1796 1 9606 Homo sapiens 0.004904828067765266 AHLMEIQVNGGTVAEK Oxidation (M) 1711.8563 0.85631924 3567;2399 B3KS36;P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;Q49AJ9;B5MCW2;H7C422;H7C3M2 RPL3;rpl3 60S ribosomal protein L3 no no 0 1 0 5.5 0.5 1 1 44.53 44.619 3 9.6648E-06 11539 20230619_1886_Aki_TMTPro18x_K_F6 98.281 82.397 102120 62040 90565 108640 118830 122210 119220 121510 137920 132050 153280 154440 152280 142620 131630 145760 161880 169520 94189 57234 93493 105970 121170 122480 120750 124460 140040 133590 156490 155370 154570 147630 135960 147730 154640 160730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 62353000 1191 2399;3567 1141 2192;2193 1797;1798;1799 1798 1477 3 9606 Homo sapiens 0.028865328951269476 AHLMEIQVNGGTVAEK Unmodified 1695.8614 0.86140461 3567;2399 B3KS36;P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;Q49AJ9;B5MCW2;H7C422;H7C3M2 RPL3;rpl3 60S ribosomal protein L3 no no 0 0 0 6 0 1 48.938 49.015 2 3.1931E-20 13468 20230619_1886_Aki_TMTPro18x_K_F6 226.59 200.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1192 2399;3567 1141 2194 1800 1800 1 9606 Homo sapiens 0.041308367577357785 AHLTFPK Unmodified 812.45447 0.45447358 3708 P62253 UBE2G1 Ubiquitin-conjugating enzyme E2 G1;Ubiquitin-conjugating enzyme E2 G1, N-terminally processed yes yes 0 0 0 3 0 1 43.215 43.28 3 0.010233 11034 20230619_1882_Aki_TMTPro18x_K_F3 93.262 58.455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1193 3708 1142 2195 1801 1801 1 9606 Homo sapiens 0.04074451905466958 AHLTNQYMQR Oxidation (M) 1276.5983 0.59825406 1667 Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;H0Y5F5;H0YEU6;Q59GZ7;Q53GL4;A0A7I2V4V6;Q3B867;Q147Y3 PABPC4 Polyadenylate-binding protein 4;Polyadenylate-binding protein yes no 0 1 0 8 0 1 30.21 30.226 3 0.0251 5762 20230619_1888_Aki_TMTPro18x_K_F8 54.066 48.46 6128.2 3406.3 7436.3 8962.9 10328 9083.9 8384.3 8136 9684.4 6252.8 5783.1 8781.8 8588.1 3901.2 7267.6 6321.2 8929.4 6909.4 5665.2 3166.3 7494.6 8582.3 10426 9150 8603.9 8332.7 9635 6499.1 6261.1 8623.2 8593.9 4327 7498.1 6348.9 8513.6 6563.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3590000 1194 1667 1143 2196 1802 1802 1085 1 9606 Homo sapiens -0.028981141165559166 AHLVAVFNEYQR Unmodified 1445.7415 0.74154747 4024 Q6ICS0;Q59EP1;B4DPJ2;Q5T0G8;P50995-2;P50995;H0Y6E1 ANXA11 Annexin;Annexin A11 yes no 0 0 0 2 0 1 48.82 48.886 3 0.0011398 13873 20230619_1881_Aki_TMTPro18x_K_F2 66.326 48.059 212100 140020 228250 230800 232700 269280 266740 235410 471230 263520 229770 226470 293390 225390 221610 235070 289360 266510 196010 129010 230640 225990 242720 268440 272960 243650 458290 264290 249730 231470 294020 233280 230390 237810 276040 252880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 683780000 1195 4024 1144 2197 1803 1803 1 9606 Homo sapiens 0.036506362661839376 AHNAGAAAAAGTHSAK Acetyl (Protein N-term) 1446.6964 0.6963882 1792 Q8NFD5-1;A0A8Q3S458 ARID1B AT-rich interactive domain-containing protein 1B yes no 1 0 0 5 0 1 28.192 28.265 3 8.7283E-06 5076 20230619_1885_Aki_TMTPro18x_K_F5 51.695 33.831 1894.9 1036.5 2224.6 2021.6 3156.8 3516.9 2755.4 2496.8 4741.6 2137.4 3626.8 3718.1 3581.1 3452.7 1766.6 1837.2 4375.8 4520.1 1751 958.27 2245.4 1977.9 3197.7 3417.1 2860.3 2612.1 4662.4 2235 3768 3691.8 3575.8 3486.4 1972.2 2022.4 4162.5 4264.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4099100 1196 1792 1145 2198 1804 1804 1 9606 Homo sapiens -0.009092142670169778 AHNNELEPTPGNTLR Unmodified 1661.8121 0.81214624 1633 A0A6Q8PGB0;P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 0 3.5 0.5 1 1 35.821 35.873 3 8.3193E-05 7975 20230619_1882_Aki_TMTPro18x_K_F3 95.755 88.697 19957 14928 19836 22267 33412 29731 29723 32919 32785 24256 32831 30105 29091 24776 44063 23554 34732 29682 18443 13730 20375 21975 33474 29574 30274 33159 33192 25160 33534 30129 30510 25674 43910 24101 33287 28145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147230000 1197 1633 1146 2199;2200 1805 1805 1 9606 Homo sapiens 0.007712647931839456 AHNVPVLVCCETYK Unmodified 1688.8014 0.80144689 2898;4664 E7ERK9;Q9UI10;Q9Y3W7;Q9UI10-3;Q9UI10-2;Q71US4 EIF2B4;DKFZp586J0119 Translation initiation factor eIF-2B subunit delta no no 0 0 0 8 0 1 46.698 46.746 3 1.4699E-08 12161 20230619_1888_Aki_TMTPro18x_K_F8 147.18 137.08 74989 34366 80150 86970 79900 79557 93481 91416 99785 98063 95316 82867 116820 82982 81520 114580 110040 112330 69189 31956 81025 83322 83280 81206 93667 92757 101160 98284 98827 84914 116790 87364 85272 114400 105030 106710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225990000 1198 2898;4664 1147 2201 1806 1806 1 9606 Homo sapiens -0.01540177177116675 AHPLGDEGGTASK Unmodified 1238.5891 0.58912916 1502 A0A3B3IRR6;A0A3B3IT54;A0A3B3ITA3;Q9H7E9;Q9H7E9-2 C8orf33 UPF0488 protein C8orf33 yes no 0 0 0 3.5 0.5 1 1 34.391 34.452 3 1.6004E-05 7364 20230619_1882_Aki_TMTPro18x_K_F3 119.25 91.076 19832 9605.5 23600 21309 21667 25760 22335 28679 27901 21963 31622 36298 31203 27635 30036 17590 32335 32452 18320 8906.3 23618 20606 22689 25745 22683 28901 28222 22989 32282 35870 31807 28268 30618 18716 30916 30665 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24335000 1199 1502 1148 2202;2203 1807;1808 1807 2 9606 Homo sapiens -0.020621842012587877 AHPPELK Unmodified 790.43374 0.43373813 2167 P62308;A8MWD9;C9JVQ0 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 yes no 0 0 0 5.5 0.5 1 1 36.522 36.602 3 0.0072471 8090 20230619_1885_Aki_TMTPro18x_K_F5 97.602 66.99 321810 204020 288190 337570 415340 443540 379010 389660 553500 397600 450360 468100 512830 394810 379960 390800 537970 480790 296900 188030 297760 331010 420670 439040 389460 401930 549470 403940 469560 469360 515000 409770 397420 397840 512810 455910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1002799999.9999999 1200 2167 1149 2204;2205 1809;1810 1809 2 9606 Homo sapiens 0.030138615258124446 AHPVFYQGTYSQALNDAK Unmodified 2008.9643 0.96428978 4333 Q96CS3;B4E2M8 FAF2 FAS-associated factor 2 yes no 0 0 0 1.5 0.5 1 1 50.006 50.035 3 1.0782E-30 14358 20230619_1880_Aki_TMTPro18x_K_F1 235.78 215.41 54926 39993 50583 56624 47514 61268 60610 57698 67095 77513 72276 86302 87908 70278 67178 87309 85913 109270 50720 36764 51752 55856 50028 61485 60553 59733 68263 77520 74674 86613 88222 73980 69827 88618 82181 103470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136240000 1201 4333 1150 2206;2207 1811 1811 1 9606 Homo sapiens 0.00016620750102447346 AHQLVLPPCDVVIK Unmodified 1587.8807 0.88068349 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;Q9NZB2-5;Q9NZB2-2;A0A0C4DH52;F8W881;Q9NX05 FAM120A;FAM120C Constitutive coactivator of PPAR-gamma-like protein 1;Constitutive coactivator of PPAR-gamma-like protein 2 yes no 0 0 0 1 0 1 53.028 53.028 3 0.00068604 15602 20230619_1880_Aki_TMTPro18x_K_F1 86.291 71.6 47081 40530 46762 53428 48342 54354 59497 54422 75035 65349 59588 64058 68779 59602 61539 70046 71241 73625 43546 37204 47603 52898 50414 54888 59790 55903 74940 65449 62297 64920 69586 62187 63286 70399 68085 69882 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47501000 1202 1839 1151 2208 1812 1812 1 9606 Homo sapiens 0.110258378393155 AHQLVMEGYNWCHDR Oxidation (M) 1930.8203 0.82028486 1200 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;P67775;B3KUN1;A0A8V8TQA1;Q6I9T8;B3KQ51;A0A8V8TQU8;H0YC23 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes no 0 1 0 6.5 0.5 1 1 40.548 40.628 4 1.173E-13 9773 20230619_1886_Aki_TMTPro18x_K_F6 172.82 167.39 82807 52112 61578 62727 77977 77253 80188 74417 114690 42162 46951 41018 37303 35977 48351 53742 44283 46988 76296 47854 64564 62680 79805 76967 81700 75370 111930 44457 50911 41608 38969 38188 48782 53324 42428 44691 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118290000 1203 1200 1152 2209;2210 1813 1813 733 1 9606 Homo sapiens -0.10789247553361747 AHQLVMEGYNWCHDR Unmodified 1914.8254 0.82537023 1200 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;P67775;B3KUN1;A0A8V8TQA1;Q6I9T8;B3KQ51;A0A8V8TQU8;H0YC23 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes no 0 0 0 7 0 1 44.057 44.14 4 6.835099999999999E-19 10943 20230619_1887_Aki_TMTPro18x_K_F7 209.56 207.27 73612 48629 62460 70334 64986 68461 78648 71974 90300 81827 87243 85304 92276 76053 74010 91077 87474 89145 67900 44733 64465 69202 67677 69442 78843 73579 91184 82292 89842 86146 93141 79558 76418 91129 83576 84685 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 384970000 1204 1200 1152 2211 1814 1814 1 9606 Homo sapiens -0.09544943690730179 AHQVVEDGYEFFAK Unmodified 1638.7678 0.7678218 3705;3704;685 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;B4DJ75;B7ZB67;C4TNW6;P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;E9PMD7;B3KXM2;P62136-3;A0A024RBP2;F8W0W8;P36873;P36873-2;Q9UPN1;F8VYE8;B4DNE3 HEL-S-80p;PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 5 1.41 1 1 1 1 1 55.581 55.631 3 6.0884E-17 16253 20230619_1886_Aki_TMTPro18x_K_F6 213.67 193.24 604840 273020 492730 605080 570970 536970 632530 620840 686490 715280 702600 692050 802690 650810 624990 834690 657380 762470 556860 253260 511630 582260 588050 549760 635800 631100 697340 717000 724280 702470 807330 682500 641660 831180 629390 724580 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1143900000 1205 3705;3704;685 1153 2212;2213;2214;2215;2216 1815;1816;1817;1818 1817 4 9606 Homo sapiens -0.026011393530325222 AHSIQIMK Oxidation (M) 942.49569 0.49568646 3788 Q02543;M0R3D6;M0R1A7;B4DM94;M0R117;B4DM74;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q76N54 RPL18A 60S ribosomal protein L18a yes no 0 1 0 1.5 0.5 1 1 37.742 37.774 3 0.00043585 8805 20230619_1881_Aki_TMTPro18x_K_F2 133.58 106.33 284310 123060 236470 278410 325480 282500 314500 305750 354480 275470 320110 268360 337150 251280 265540 314350 346580 265410 261750 114230 245700 268150 330270 285790 318870 309980 357270 279940 330370 272520 339990 263200 275980 312030 330260 252900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1024799999.9999999 1206 3788 1154 2217;2218 1819 1819 2469 1 9606 Homo sapiens 0.02213844882635385 AHSIQIMK Unmodified 926.50077 0.50077184 3788 Q02543;M0R3D6;M0R1A7;B4DM94;M0R117;B4DM74;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q76N54 RPL18A 60S ribosomal protein L18a yes no 0 0 0 2.33 0.471 2 1 40.769 40.835 2;3 5.0551E-09 10189 20230619_1881_Aki_TMTPro18x_K_F2 168.23 114.68 61799 38012 56120 59582 71226 66813 61317 62247 87314 60697 53642 56551 58831 51231 63967 60084 63534 51596 57011 35013 57707 58464 72492 66912 63181 63863 86100 61364 56884 57404 60150 53475 64904 59786 60711 49139 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2919399999.9999995 1207 3788 1154 2219;2220;2221 1820;1821 1820 2 9606 Homo sapiens 0.03458148745244216 AHSNPMADHTLR Unmodified 1348.6306 0.63061682 649 A0A024RB62;Q9UBP6;F8VSD9;H0YHX0;Q9UBP6-2 METTL1 tRNA (guanine-N(7)-)-methyltransferase yes no 0 0 0 6 0 1 29.586 29.617 3 0.00010218 5638 20230619_1886_Aki_TMTPro18x_K_F6 94.547 81.92 11281 7601.9 10218 11935 14053 13703 13974 15229 16432 16383 15436 15432 15375 15772 15137 12474 22152 16469 10412 6999.2 10535 11715 14282 13755 14169 15475 16568 16466 15883 15708 15710 16080 15765 12824 21087 15621 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1879800 1208 649 1155 2222 1822;1823 1823 2 9606 Homo sapiens -0.029753267135674832 AHSQTDRENLGTLR Unmodified 1596.7968 0.79683052 1147 E3UN97;A0A2I6J4B1;A0A1W1B5Q9;A0A1W1B5P4;A0A1D8MAR2;A0A455JTQ2;A0A1D3KYM1;A0A173ADK6;A0A0U5PXQ4;A0A7D5H2K1;A0A7R9KAH2;A0A7R9PSR9;A0A0S4XQY3;A0A4P2SS15;A0A4P2SSH9;A0A6B7FUX4;A0A6B7HGN6;A0A6B9MMF8;A0A6C0SH12;A0A6M4AA77;A0A2U3QLK0;A0A5H2UEZ4;A0A858LHP1;A0A2H4WPZ2;A0A1B1LKE5;A0A2P9FIJ6;Q95J07;A0A858LHN0;A0A7U3K2K7;A0A3G2LWQ6;A0A858BAV0;Q8SNC6;M4RMN4;M4R8V8;M4R8T6;D8MIW0;A0A090JY51;U6ER51;W0HE66;Q9GIP0;A9QVM4;A0A1G4NQS3;W8Y4A2;A0PBY5;A0A167RN11;Q6IV48;A0A678ZH37;A0A678ZGK4;A0A5H2UTB6;Q6IVJ5;Q6IVJ6;J7SA67;A0A1W6C2M7;A7LB37;A0A4Y6GTZ7;N1LK74;D0W033;D2KZ37;A0A387LBR7;A0A583ZAV7;E2GJE0;A0A583ZB65;C5IZQ7;C7FDX3;C8CH61;A0A2U7NMX5;A0A0A7C4B9;C7FDQ2;J9UEM1;A0A0K0KRX5;A0A0A7C7X1;M1F358;D3U427;D5FZV5;D6ML08;D5M8F7;A0A583ZAX9;D7NSP8;A0A2U7NGS2;A0A2U7MWE9;E0YTI7;D2XUR2;E2GJF4;J7F575;I6NVL5;J7G213;A0A2I4PZ17;J9PW37;D6ML03;A0A2I4PZP7;K7P5R8;A0A0A7C5R3;A0A0N7A4M8;A0A583ZAZ0;D7NNR1;A0A583ZB28;D7NNR0;D7GK36;D6ML60;C5IZQ0;D1MEQ3;D7NP84;D7NP82;A0A0X7YYJ0;A0A109NRC5;B3VDI3;C8XTP1;A9Z191;A0A1S5QQT3;A0A1X9I4E7;A0A583ZAZ2;A0A288R0G6;A8D9Z7;A0A2I4PZ61;A7L3S7;A0A0A7C5I5;K7P4Z1;A0A0A7C561;A0A0A7C570;B8Y1X4;A0A0A7C5N8;C5IZP2;F2VNG2;J7K182;L7PEY0;K7YBN9;E5G0X5;D6ML14;Q27I50;M9XDU8;I6RCV5;M4RMM8;I6NMZ8;W8NKM3;W0HHL7;V5N2H8;V5JAA3;C0JFR3;M9P9B7;F8RHB8;F6KRN5;F2VNC1;F8R134;E2GJG0;N0A8X4;F8R141;F8R8H4;Q9TP40;Q95J03;F8SKV1;Q9MYC5;F2X605;F4YZT3;F4YZT4;F6KRK2;I6MHG7;I3QHP4;G1EPE1;G1EP85;G1EP46;F2VNI9 HLA-A yes no 0 0 1 5 0 1 29.366 29.441 3 0.045247 5475 20230619_1885_Aki_TMTPro18x_K_F5 47.915 35.938 5893.2 1458.4 4156.5 3958.6 4770.3 3477.7 4434.3 6105.9 5356.1 4478.8 3926.8 4271.7 4352.6 3589.1 3574.2 4862.4 4561.7 3906.3 5412.2 1365.8 4371.7 3785.7 4889.3 3612.4 4523.1 6006.2 5348.2 4604.1 4116.5 4323.9 4392.9 3791.2 3709.6 4808.8 4350.5 3722.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6906700 1209 1147 1156 2223 1824 1824 1 9606 Homo sapiens 0.02230397995981548 AHSSMVGVNLPQK Unmodified 1366.7027 0.70271913 3374 V9HWF4;P00558;P00558-2;B4E1H9 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 4.5 0.5 1 1 44.117 44.179 3 8.8227E-05 11354 20230619_1883_Aki_TMTPro18x_K_F4 103.88 87.656 38591 24745 32546 36228 39197 42456 47654 44077 59970 46676 48494 50381 55503 44254 45075 47704 55191 50020 35589 22769 33696 35713 40438 42483 47902 44989 59900 47174 50605 50758 55922 46050 46587 48011 52673 47504 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128170000 1210 3374 1157 2224;2225 1825 1825 1 9606 Homo sapiens 0.03403587640150363 AHTDFFEAFK Unmodified 1211.5611 0.56112349 3691 Q53HJ0;Q59EL2;P61201;P61201-2;B4DIH5;H0YKU5 COPS2 COP9 signalosome complex subunit 2 yes no 0 0 0 7.5 0.5 1 1 55.018 55.082 3 3.7334E-07 15760 20230619_1887_Aki_TMTPro18x_K_F7 174.98 139.44 150640 81154 118290 147380 131100 130450 144190 160930 169610 172090 156430 157430 194330 135670 157890 208510 151960 173070 138740 74955 123210 143070 135510 133830 145430 162550 170940 172810 162760 159840 195180 144610 161160 206220 145600 164680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 387450000 1211 3691 1158 2226;2227 1826 1826 1 9606 Homo sapiens -0.03619462390679473 AHTMTDDVTFWK Oxidation (M) 1466.65 0.65001485 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 5.5 0.5 1 1 48.851 48.928 3 1.284E-05 13480 20230619_1886_Aki_TMTPro18x_K_F6 127.87 94.921 219250 148040 228560 257360 244530 248610 242920 245250 287730 268000 285120 254620 287430 232020 248290 274290 290420 275860 202590 136490 231780 250620 252550 251890 246470 251440 290470 269270 292510 258440 291360 242410 255630 274980 277360 262050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 515350000 1212 826 1159 2228;2229 1827;1828 1828 485 2 9606 Homo sapiens -0.06464415213349639 AHTMTDDVTFWK Unmodified 1450.6551 0.65510023 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 6.5 0.5 1 1 53.111 53.185 3 4.735E-18 15007 20230619_1887_Aki_TMTPro18x_K_F7 204.17 183.79 463790 245480 399470 465590 306070 370620 462310 455310 516630 599720 511350 532170 648630 517420 486020 574900 529810 645230 427420 226900 410220 450550 329920 383530 458810 463250 523610 596110 530920 542530 649650 537670 500010 580480 507290 611670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1133000000 1213 826 1159 2230;2231 1829;1830 1830 2 9606 Homo sapiens -0.05220111350718071 AHTVLAASCAR Unmodified 1155.5819 0.58187571 4280 Q8WUY1;B4DWJ7 THEM6 Protein THEM6 yes no 0 0 0 1.5 0.5 1 1 31.883 31.914 3 2.6893E-06 6428 20230619_1881_Aki_TMTPro18x_K_F2 124.67 104.11 12312 8595.3 10625 13943 11310 9562.8 11196 12854 14848 10795 12112 9557.8 12637 10160 11865 10084 13306 11829 11361 7916 10959 13577 11678 10079 11412 12851 14797 10988 12561 9789.9 12842 10465 12147 10239 12707 11222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56395000 1214 4280 1160 2232;2233 1831 1831 1 9606 Homo sapiens 0.010308047173339219 AHVAELERR Unmodified 1079.5836 0.58359027 1787 A0A8I5QJC8;Q8IZ52-2;Q8IZ52-4;Q8IZ52 CHPF Chondroitin sulfate synthase 2 yes no 0 0 1 1.5 0.5 1 1 32.271 32.301 3 0.0041239 6909 20230619_1880_Aki_TMTPro18x_K_F1 66.351 42.321 26659 13555 25229 27385 29568 33337 29052 36322 40919 31530 34145 35018 41195 37045 31145 44818 55368 59501 24582 12544 25826 26576 30386 33295 29701 36742 40723 32248 35653 35493 41392 38576 33258 45681 52770 56344 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53294000 1215 1787 1161 2234;2235 1832;1833 1832 2 9606 Homo sapiens 0.04698181797584766 AHVDEFK Unmodified 844.40792 0.40791731 1248 Q16851-2;A0A140VKE1;A0A7I2YQ74;Q16851;E7EUC7;B4DUP2;A0A087WYS1;B2RAN1;Q53QE9;D6W5E6 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes no 0 0 0 3.5 0.5 1 1 38.323 38.371 3 0.002146 8857 20230619_1883_Aki_TMTPro18x_K_F4 119.21 85.133 208970 76296 171470 188850 236770 197180 206360 211830 263980 213740 257190 266510 270070 218670 205430 243440 266710 256590 192270 71034 178300 181380 239630 199050 211600 215460 265260 217580 264720 266550 272130 228470 213620 244880 254520 243610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148480000 1216 1248 1162 2236;2237 1834;1835 1835 2 9606 Homo sapiens -0.020510327164743103 AHVEAAEEAAR Unmodified 1152.5523 0.55234972 4424 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 yes yes 0 0 0 1 0 1 30.045 30.045 3 2.22E-06 6020 20230619_1880_Aki_TMTPro18x_K_F1 133.07 106.4 11221 7019.7 11650 11489 18842 17725 18172 15736 20672 16961 19062 19424 18195 18412 18030 14515 22236 22152 10364 6468.9 11907 11310 18959 17405 18423 16246 20843 17163 19600 19561 18614 18818 18548 15089 21234 20959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13432000 1217 4424 1163 2238 1836 1836 1 9606 Homo sapiens -0.017824360271788464 AHVETLR Unmodified 824.45045 0.45045083 2781 CON__P15497 yes yes 0 0 0 4.5 0.5 1 1 28.964 29.036 2 0.058677 5223 20230619_1883_Aki_TMTPro18x_K_F4 82.305 41.732 + 10306 9057.2 23550 15578 43460 36264 28669 30111 41858 31415 60637 77141 30925 37066 45442 20208 42792 69883 9635.4 8340.5 23061 15467 43064 34975 30181 31213 42547 33060 60146 74753 33247 38653 45678 23436 41156 65749 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18764000 1218 2781 1164 2239;2240 1837 1837 1 0.031203624117551954 AHVIVMAATNRPNSIDPALR Unmodified 2145.1477 0.14769065 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;A0A7I2V2Y2;Q9HAP1;A0A7P0TAY0 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 1 5 0 1 45.98 46.057 4 1.0454E-09 12055 20230619_1885_Aki_TMTPro18x_K_F5 121.26 102.43 43469 27140 45208 47015 46765 47055 54309 49503 79986 50052 57986 44604 57350 41385 50537 56674 46462 61190 40148 25030 45814 45825 48656 47618 55077 50433 79035 50459 60394 45494 58177 43658 51326 56933 44596 58017 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 325120000 1219 3656 1165 2241 1838 1838 1 9606 Homo sapiens 0.12092271260098642 AHVIVMAATNRPNSIDPALRR Unmodified 2301.2488 0.24880168 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;A0A7I2V2Y2;Q9HAP1;A0A7P0TAY0 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 2 8 0 1 42.408 42.411 5 1.2478E-07 10455 20230619_1888_Aki_TMTPro18x_K_F8 102.79 85.303 25247 14268 30470 25211 29234 29551 36459 33230 31149 28125 31207 31241 39097 28762 30386 31031 30277 35839 23340 13169 30471 24620 30597 29623 36177 33561 32031 28790 32363 31499 39201 29899 31050 31416 29008 33969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182250000 1220 3656 1166 2242 1839 1839 1 9606 Homo sapiens 0.15022722962839907 AHVQEVAQHNLK Unmodified 1372.7211 0.72114638 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7 KTN1 Kinectin yes no 0 0 0 6.67 0.471 1 2 34.816 34.885 3;4 1.1704E-09 7252 20230619_1887_Aki_TMTPro18x_K_F7 170.66 134.92 137220 51814 122930 127320 158970 140780 148140 148300 146820 125170 166670 172370 151630 132190 148420 135000 168080 154330 126350 48220 126590 122430 161700 141440 149980 150380 150330 129160 169470 171480 155100 137810 151980 136770 160530 146420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 378200000 1221 380 1167 2243;2244;2245 1840;1841;1842 1842 3 9606 Homo sapiens 0.04969465606382073 AHVTHPELK Unmodified 1030.556 0.55597854 3357 Q5J7U2;O95478 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog yes no 0 0 0 6.5 0.5 1 1 32.542 32.604 4 0.00029284 6720 20230619_1886_Aki_TMTPro18x_K_F6 112.84 73.537 98269 45499 80625 92409 107590 99956 100130 101670 113670 105160 108170 120680 139930 108200 82815 127920 143660 143660 90485 42136 83820 89480 109330 100510 101800 103840 114860 106570 112650 121370 139080 113140 88816 128970 136860 136280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82809000 1222 3357 1168 2246;2247 1843;1844 1843 2 9606 Homo sapiens 0.04192278537357197 AHWEVER Unmodified 925.44061 0.44061443 1887 A0AV58;Q13033-2;Q13033;G3V340 STRN3 Striatin-3 yes no 0 0 0 3 0 1 33.926 33.992 3 0.0015937 7173 20230619_1882_Aki_TMTPro18x_K_F3 129.39 98.973 45090 24431 46060 48640 50507 48138 50167 52739 57649 65986 78386 71846 77286 66221 61369 63615 86602 72581 41613 22596 46780 47091 52043 48803 50866 53909 59155 66137 79331 72481 78170 68368 64079 64477 82519 68894 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25591000 1223 1887 1169 2248 1845 1845 1 9606 Homo sapiens -0.025088255936111636 AHYEAEIK Unmodified 959.47125 0.47124585 2500 B4DJ85;Q92990;M0QXG8 GLMN Glomulin yes no 0 0 0 3 0 1 37.498 37.551 3 9.5224E-06 8592 20230619_1882_Aki_TMTPro18x_K_F3 138.54 74.98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1224 2500 1170 2249 1846 1846 1 9606 Homo sapiens -0.010110919992484924 AHYEPADR Unmodified 957.43044 0.43044367 1017 E7EN19;Q53TX8;A0A0D9SEY1;B7Z388;O95819-3;O95819-6;G5E948;V9HWH3;O95819-2;B7Z3V5;O95819;O95819-5;H7C360;O95819-4;E7ENQ1;Q5MD60;E7EX83;H7C0P6;H7C3Z6 MAP4K4;HEL-S-31 Mitogen-activated protein kinase kinase kinase kinase 4 yes no 0 0 0 1.5 0.5 1 1 26.468 26.468 3 0.00077046 4651 20230619_1880_Aki_TMTPro18x_K_F1 111.95 82.798 8407.7 3434.4 10789 9436.1 11296 12589 10478 14114 13538 9636.1 15736 15714 10955 10698 13331 6681.1 14197 12752 7768.3 3201.7 10760 9071.5 11670 12510 10722 14181 13679 10162 15834 15499 11453 10986 13524 7142.4 13565 12053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12139000 1225 1017 1171 2250;2251 1847;1848 1847 2 9606 Homo sapiens -0.049974333188629316 AIACLLFGGSR Unmodified 1163.6121 0.61211321 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 8 0 1 62.754 62.779 3 0.0079699 18971 20230619_1888_Aki_TMTPro18x_K_F8 66.262 56.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1226 2188 1172 2252 1849 1849 1 9606 Homo sapiens 0.03685163382533574 AIACVVTACSAELEK Unmodified 1620.7851 0.78512813 1731 A0A804HJA4;J3KN16;Q5VYK3;B3KXF2;F6XAQ5 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 6 0 1 58.446 58.511 3 0.0001788 17493 20230619_1886_Aki_TMTPro18x_K_F6 93.478 75.678 54865 50555 50487 61600 62892 68907 63019 60765 81580 64381 62751 63946 62765 55662 61115 67540 61891 74127 50739 46358 51906 61379 64384 68944 64078 62749 81273 64905 65280 64653 64004 58324 62259 68028 59294 70292 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28616000 1227 1731 1173 2253 1850 1850 1 9606 Homo sapiens -0.00043303133884364797 AIADTGANVVVTGGK Unmodified 1371.7358 0.73579339 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 7.5 0.5 1 1 49.862 49.939 2 1.4191E-51 13527 20230619_1887_Aki_TMTPro18x_K_F7 296.56 208.76 187760 151900 154960 171940 180760 204330 183080 174370 207300 225680 232170 223530 253960 199700 210540 257790 241690 237600 173350 139260 160630 172420 185930 203510 185210 181590 210950 225270 237890 226290 256330 209900 216830 256860 230920 225910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 254940000 1228 3621 1174 2254;2255 1851;1852 1851 2 9606 Homo sapiens 0.06479492963808298 AIADWYNEK Unmodified 1108.5189 0.51892433 560 A0A024R983;P10155;P10155-3;P10155-5;P10155-4;P10155-2;H0Y9N5 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 0 0 5.5 0.5 1 1 55.372 55.442 3 0.0042433 16036 20230619_1885_Aki_TMTPro18x_K_F5 76.064 48.583 44183 38273 40640 43062 98766 55381 54505 51676 64067 34343 35391 32559 35832 38296 36096 40657 33888 31639 40843 35076 42390 43266 96399 55136 57772 52585 63565 35655 37671 33372 36634 39390 36604 40311 32430 30155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 425270000 1229 560 1175 2256;2257 1853 1853 1 9606 Homo sapiens -0.03099437799073712 AIAELGIYPAVDPLDSTSR Unmodified 1987.0262 0.026221336 3391 Q0QEN7;V9HW31;P06576;H0YH81 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 5.5 0.5 1 1 63.394 63.441 3 1.7535E-14 19642 20230619_1886_Aki_TMTPro18x_K_F6 149.52 136.64 95693 62574 137710 139100 100210 117140 126970 116610 124570 156570 121160 135150 142910 133870 143070 157770 142680 158100 88695 57404 135850 133780 107670 119980 126460 120310 127140 155400 125570 138050 145260 139370 145540 158150 136630 150100 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1354000000 1230 3391 1176 2258;2259 1854;1855 1855 2 9606 Homo sapiens 0.07218927378539775 AIAELIR Unmodified 784.48069 0.48068833 3133 J3KR35;Q8WUD4 CCDC12 Coiled-coil domain-containing protein 12 yes no 0 0 0 7.5 0.5 1 1 51.736 51.811 2 0.079199 14288 20230619_1888_Aki_TMTPro18x_K_F8 73.039 8.2624 186000 144920 168870 165200 174460 191410 196660 194660 232520 164090 151790 163490 176760 135850 182090 171340 179830 160320 171800 132880 173030 165600 181430 191670 198060 197810 231480 167560 160770 165060 179800 142970 184870 171040 171940 152460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206230000 1231 3133 1177 2260;2261 1856 1856 1 9606 Homo sapiens 0.07982721076950838 AIAESLNSCRPSDASATR Unmodified 1904.901 0.9010376 468 D6RC40;D6RCQ3;A0A024R7R0;Q96RL1-2;Q96RL1-3;Q96RL1 UIMC1;RAP80 BRCA1-A complex subunit RAP80 yes no 0 0 1 6.5 0.5 1 1 39.912 39.988 3 1.4348E-59 9245 20230619_1887_Aki_TMTPro18x_K_F7 239.75 213.38 63545 50921 62209 62120 66893 80271 68357 71983 69702 63396 74261 73996 75241 63285 69351 83083 87077 80632 58741 46717 63382 62057 69195 79581 68911 73865 71095 64858 76024 74330 76495 66671 71675 82993 83098 76635 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57063000 1232 468 1178 2262;2263 1857;1858 1858 2 9606 Homo sapiens -0.015216880294701696 AIAFLQQPR Unmodified 1042.5924 0.59236404 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2;O14660 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 4.5 0.5 1 1 52.875 52.923 2 0.0017096 15323 20230619_1883_Aki_TMTPro18x_K_F4 134.06 94.908 423680 393480 350920 363200 434290 595620 466630 428990 606100 64403 57619 64978 72811 53935 128900 78188 73332 66863 391540 359940 364050 372470 446710 580650 472300 440070 585890 85853 85805 65905 76691 57300 126740 77713 70656 63650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 320570000 1233 3488 1179 2264;2265 1859;1860 1859 2 9606 Homo sapiens 0.07277155434076121 AIAHYEQSADYYK Unmodified 1557.71 0.70997257 109;871 A0A024R0R9;P54920;M0R0Y2;M0R2M1;M0R058;M0R027;A0A024R0V6;B4DGP9;B4DIV0;A0A087WZQ7;Q9H115-3;Q9H115-2;Q9H115 NAPA;NAPB Alpha-soluble NSF attachment protein;Beta-soluble NSF attachment protein no no 0 0 0 5.5 0.5 1 1 45.485 45.567 3 7.9969E-16 11859 20230619_1885_Aki_TMTPro18x_K_F5 208.27 186.06 143870 118360 124520 158590 130010 156720 148490 152760 194190 223940 217370 244970 250640 219570 160460 277610 271980 281720 132890 108680 128410 156760 135330 158490 150080 158250 196360 223110 223440 246810 250620 230370 171560 277900 259220 267500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284780000 1234 109;871 1180 2266;2267 1861 1861 1 9606 Homo sapiens -0.04657401278427642 AIALQPENPMAHFLLGR Unmodified 1876.9982 0.99817287 588 H0YMB1;A0A024R9P6;Q96TC7-2;Q96TC7 RMDN3;FAM82C Regulator of microtubule dynamics protein 3 yes no 0 0 0 4 0 1 62.449 62.453 3 4.2965E-08 19371 20230619_1883_Aki_TMTPro18x_K_F4 121.13 105.96 15376 14640 17100 17033 18706 20522 16704 23415 23936 18709 21978 24803 22079 21993 25352 22405 27222 24566 14246 13417 17249 17060 19257 20553 17202 23572 23881 19349 22673 24805 22713 22784 25807 22643 26009 23320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50378000 1235 588 1181 2268 1862 1862 1 9606 Homo sapiens 0.09475370708128139 AIANECQANFISIK Unmodified 1577.7872 0.78717704 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;Q9NTC4;Q9HAP0 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 8 0 1 56.177 56.234 3 1.1184E-08 16231 20230619_1888_Aki_TMTPro18x_K_F8 119.17 98.215 326020 281680 262600 308450 315910 357410 346310 353420 401210 344000 337210 350420 407930 337350 342500 406910 372050 342840 301080 258090 273150 310010 325010 357660 349020 361020 403050 348490 352160 355110 410960 352030 351400 404070 355490 326420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 795690000 1236 3656 1182 2269 1863 1863 1 9606 Homo sapiens 0.021394936662318287 AIAQLFEK Unmodified 918.51747 0.51746776 3796 Q05209;Q05209-2;Q05209-3;B4E105 PTPN12 Tyrosine-protein phosphatase non-receptor type 12;Protein-tyrosine-phosphatase yes no 0 0 0 1.5 0.5 1 1 60.595 60.595 3 0.032089 18903 20230619_1881_Aki_TMTPro18x_K_F2 64.265 43.363 25670 25362 26093 27860 27962 35311 28569 27994 32899 32586 32140 32774 35074 29571 30882 43911 33745 36487 23770 23228 26515 28029 28951 34971 28908 29227 33254 32702 33144 33177 35507 31356 31710 43439 32278 34725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16618000 1237 3796 1183 2270;2271 1864;1865 1865 2 9606 Homo sapiens 0.05494972902852169 AIASSLK Unmodified 688.41194 0.41194006 3323 O75947;O75947-2;A0PJH2;F5H608 ATP5H ATP synthase subunit d, mitochondrial yes no 0 0 0 2 0 1 44.539 44.622 2 0.02504 11993 20230619_1881_Aki_TMTPro18x_K_F2 98.418 32.746 234370 160430 237550 254490 350230 426040 307740 320220 459160 150840 161010 164670 172200 158490 194450 171190 199270 184270 216520 147720 242910 251270 354320 415030 317130 329780 446360 162680 179790 166510 176700 164330 197470 172650 190510 174930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130940000 1238 3323 1184 2272 1866 1866 1 9606 Homo sapiens 0.05527056777236794 AIAVLTSGGDAQGMNAAVR Unmodified 1800.9152 0.9152311 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;A0A0S2Z4A8;F8VZQ1;F8VX13;F8VP00;F8VVE3;F8VYK8;F8VUB8;F8VW30;F8VTQ3;F8VSF7 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 4.5 3.5 1 1 54.886 54.886 2;3 1.9708E-40 16331 20230619_1880_Aki_TMTPro18x_K_F1 265.77 247.4 40661 38857 43492 48929 33872 42801 44111 41457 45407 50486 42007 45529 50017 46247 44222 48779 50937 55532 37659 35638 43840 48500 36246 43707 43935 42713 46097 50386 43641 46441 50552 47820 45465 49344 48703 52656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142010000 1239 116 1185 2273;2274 1867;1868 1867 2 9606 Homo sapiens 0.04681009189471297 AIAVLTSGGDAQGMNAAVR Oxidation (M) 1816.9101 0.91014572 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;A0A0S2Z4A8;F8VZQ1;F8VX13;F8VP00;F8VVE3;F8VYK8;F8VUB8;F8VW30;F8VTQ3;F8VSF7 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 1 0 8 0 1 50.249 50.325 3 0.011565 13641 20230619_1888_Aki_TMTPro18x_K_F8 51.495 33.131 48021 45297 48710 48203 55236 45696 55521 53669 57305 43819 53388 46152 46946 38229 48944 42188 44203 47483 44451 41481 49501 48449 56731 46643 56022 54028 58068 44891 54641 46510 48191 39922 49437 42653 42362 45031 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96919000 1240 116 1185 2275 1869 1869 46 1 9606 Homo sapiens 0.03436705326862466 AICDHVR Unmodified 869.41777 0.41777049 3570 V9HWF2;P40925;P40925-3;A0A5K1VW95;P40925-2;B9A041;B8ZZ51 HEL-S-32;MDH1 Malate dehydrogenase;Malate dehydrogenase, cytoplasmic yes no 0 0 0 4.5 0.5 1 1 29.56 29.632 2 0.023359 5575 20230619_1885_Aki_TMTPro18x_K_F5 100.67 88.239 63341 37911 57967 60808 81907 75236 75263 74722 83931 35101 46949 41141 34886 29213 56677 26195 56650 32365 58430 34935 59694 59690 82900 74966 76500 75313 83365 37854 49390 41119 37044 30375 57066 26823 54035 30764 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76064000 1241 3570 1186 2276;2277 1870;1871 1871 2 9606 Homo sapiens -0.022161679827377156 AICIPEGAK Unmodified 957.49535 0.49535211 2038 A8K4A8;Q6PI48;Q9H9J7;Q9NVT8;A0A3B3IS01;A0A3B3IT01;A0A3B3ITK9;A0A3B3ITS3;A0A3B3IS54 DARS2 Aspartate--tRNA ligase, mitochondrial yes no 0 0 0 7 0 1 48.804 48.89 2 0.00014634 13083 20230619_1887_Aki_TMTPro18x_K_F7 123.72 82.532 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1242 2038 1187 2278 1872 1872 1 9606 Homo sapiens 0.01490425162774045 AICSGFFR Unmodified 956.45382 0.45382165 2093 K7END7;F5H658;B7Z8F4;Q86YB2;Q86X36;A8K6J9;Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes no 0 0 0 4 0 1 51.108 51.14 2 0.090369 14509 20230619_1883_Aki_TMTPro18x_K_F4 65.313 43.631 96440 89891 90788 93176 83836 111430 99198 104560 126000 83308 85539 74711 86749 74253 92734 93095 88897 81708 89210 82302 92630 94118 88249 111110 99956 106690 125090 85166 89670 76311 88802 77597 93981 92620 85043 77754 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35372000 1243 2093 1188 2279 1873 1873 1 9606 Homo sapiens -0.026147108058808044 AICTEAGLMALR Unmodified 1304.6581 0.65807712 3706 Q53XL8;Q53HB3;P62191;P62191-2 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 7.5 0.5 1 1 55.537 55.599 2 8.6205E-13 15925 20230619_1888_Aki_TMTPro18x_K_F8 206.23 175.67 108620 91627 100500 106600 86182 120080 114860 109420 121310 122430 107200 92491 119650 88913 114950 126010 114710 105690 100390 84008 102630 106620 91625 120110 114340 112870 122710 122140 111120 95204 121410 93858 117010 124860 109690 100630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78678000 1244 3706 1189 2280;2281 1874 1874 1 9606 Homo sapiens 0.017934405024561784 AIDLFTDAIK Unmodified 1105.6019 0.60192568 1242 B4E0U6;A0A140VKA6;P50502;Q0IJ56;Q1XBU6;B7ZA40;H7C3I1;Q3KNR6;Q8IZP2;Q8NFI4;F6VDH7;D6W507 ST13;ST13P4;ST13P5;hCG_1990625 Hsc70-interacting protein;Putative protein FAM10A4;Putative protein FAM10A5 yes no 0 0 0 7.25 0.829 1 1 2 63.158 63.193 3 1.4833E-05 19268 20230619_1887_Aki_TMTPro18x_K_F7 145.46 104.87 1570800 1298600 1463300 1651800 1362000 1634500 1518700 1521900 1698100 1784500 1757600 1848100 1836100 1717300 1815600 2148400 1887900 2216900 1451700 1191800 1495100 1638600 1428400 1651300 1528400 1570000 1723000 1791400 1804900 1869100 1871600 1798000 1852600 2154800 1807900 2103700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3298399999.9999995 1245 1242 1190 2282;2283;2284;2285 1875;1876;1877 1876 3 9606 Homo sapiens 0.053348789289202614 AIDMFNK Unmodified 837.40547 0.40547447 2627 B4DZ87;O94826;B3KQK0;B3KQK5 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 0 8 0 1 53.993 54.065 2 0.011157 15268 20230619_1888_Aki_TMTPro18x_K_F8 121.52 71.481 269870 224400 239720 283380 262880 340120 315710 304850 350350 295290 325840 361430 353310 294580 346140 357700 373500 392280 249330 205920 246740 281990 273110 338650 316240 313680 353790 301050 336980 361640 359380 309450 353680 360340 357230 372150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233530000 1246 2627 1191 2286 1878 1878 1 9606 Homo sapiens -0.019732044457896336 AIDYDPLDK Unmodified 1048.5077 0.50769094 2387 B3KQG5;Q59EX8;H0YGW5;F5H7J9;B7ZLD0;O75581;O75197 LRP6;LRP5 Low-density lipoprotein receptor-related protein 6;Low-density lipoprotein receptor-related protein 5 yes no 0 0 0 7 0 1 45.73 45.818 2 0.0054963 11649 20230619_1887_Aki_TMTPro18x_K_F7 86.011 39.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1247 2387 1192 2287 1879 1879 1 9606 Homo sapiens -0.014622598932191977 AIDYVQR Unmodified 863.45012 0.45011648 2465 H0YKJ9;B4DEK8;O60637-3;O60637-2;O60637 TSPAN3 Tetraspanin;Tetraspanin-3 yes no 0 0 0 5 0.816 1 1 1 40.458 40.532 2 0.0074767 9750 20230619_1885_Aki_TMTPro18x_K_F5 124.89 52.012 246420 218040 240470 220410 247820 227410 209440 210230 261380 275330 277590 230670 291120 218700 204650 284710 267230 212650 227930 199620 244640 222680 255550 229320 215160 217690 264190 273440 284180 235960 292410 229550 213500 280810 254700 202940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290520000 1248 2465 1193 2288;2289;2290 1880;1881 1880 2 9606 Homo sapiens 0.012929426918958598 AIEAAPQEPEQK Unmodified 1309.6514 0.65139506 3105 Q96CP2;I3L1Y9 FLYWCH2 FLYWCH family member 2 yes no 0 0 0 2.5 0.5 1 1 42.245 42.316 3 7.0886E-05 10898 20230619_1881_Aki_TMTPro18x_K_F2 92.247 73.651 80490 62712 72212 79392 99297 98653 73515 95325 121130 99190 117920 106530 112070 100160 97991 113900 134240 124550 74341 57563 74462 79053 100340 98242 77144 97634 120520 100320 120760 107670 113970 104250 101970 114790 128020 118220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125410000 1249 3105 1194 2291;2292 1882 1882 1 9606 Homo sapiens 0.00895542147100059 AIEALHGHELRPGR Unmodified 1554.8379 0.83790748 1111 A0A0S2Z4Z0;Q96PK6;A0A0S2Z567;Q96PK6-2;A0A0A6YYI9;A0A0S2Z5V2;F8WDX3;A0A0A0MSL8;B8ZZ74;Q96PK6-3;Q96PK6-4 RBM14;RBM14-RBM4 RNA-binding protein 14 no no 0 0 1 7.5 0.5 1 1 35.092 35.124 4 4.3252E-16 7334 20230619_1887_Aki_TMTPro18x_K_F7 204.13 169.13 79888 61543 74992 83201 85321 94987 94730 90133 102670 91778 98468 83083 97015 83873 90519 103360 96720 92060 73806 56531 76802 82376 88071 95026 95195 92463 103940 92438 101060 84860 98765 87510 92573 102900 92448 87576 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 395370000 1250 1111 1195 2293;2294 1883;1884 1883 2 9606 Homo sapiens 0.08268203826105491 AIEALSGK Unmodified 787.44397 0.44396847 3211 O00425;F8WD15 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes no 0 0 0 7 0 1 49.298 49.383 2 0.0043355 13296 20230619_1887_Aki_TMTPro18x_K_F7 116.25 66.66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1251 3211 1196 2295 1885 1885 1 9606 Homo sapiens 0.04174424460393311 AIEAVAISPWK Unmodified 1183.6601 0.66010926 4514 Q9H4A4;A6NKB8;Q7RU04 RNPEP Aminopeptidase B yes no 0 0 0 1.5 0.5 1 1 61.238 61.244 3 0.0014967 19139 20230619_1881_Aki_TMTPro18x_K_F2 86.014 66.402 74313 56838 57233 68476 63529 74693 76983 74786 59728 79235 81358 76081 87269 55802 80055 77930 79104 95840 68557 52149 59737 68276 65874 75052 76320 76516 62772 79670 82697 76706 88389 59528 81473 78951 75811 90778 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288920000 1252 4514 1197 2296;2297 1886 1886 1 9606 Homo sapiens 0.07562560574228883 AIEDEGGNPDEIEITSEGNK Unmodified 2115.9444 0.94440178 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z959;B7Z2H3;K7ES42 SAFB Scaffold attachment factor B1 yes no 0 0 0 1 0 1 51.908 51.908 3 1.5162E-22 15157 20230619_1880_Aki_TMTPro18x_K_F1 182.28 167.13 41057 22974 28502 37836 37915 42314 31947 37828 51498 41229 41576 53542 54152 53079 37144 65349 69241 77849 37793 21185 30189 37009 38557 42322 33165 39039 50957 41897 43730 53783 54156 55398 39998 66074 65999 73778 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186280000 1253 2020 1198 2298 1887 1887 1 9606 Homo sapiens -0.06893264561858814 AIEDEGGNPDEIEITSEGNKK Unmodified 2244.0394 0.039364797 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z959;B7Z2H3;K7ES42 SAFB Scaffold attachment factor B1 yes no 0 0 1 2.5 0.5 1 1 48.908 48.974 3;4 1.7851999999999998E-22 13977 20230619_1881_Aki_TMTPro18x_K_F2 175.59 168.93 157920 132240 169480 160490 162870 153370 159670 151800 173530 194580 198270 214200 202210 174950 184280 229780 211530 259700 146140 121290 170990 159720 169370 155710 161700 156400 177130 194890 202540 215210 205430 184700 189480 231540 202460 246170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 257880000 1254 2020 1199 2299;2300 1888;1889 1888 2 9606 Homo sapiens -0.03289331090672931 AIEDQLK Unmodified 815.43888 0.43888309 885 A0A087X0W9;Q8N6M0-2;Q8N6M0 OTUD6B OTU domain-containing protein 6B yes no 0 0 0 4 0 1 45.811 45.855 2 0.025129 12095 20230619_1883_Aki_TMTPro18x_K_F4 98.299 22.92 135290 117090 143330 149450 171350 166190 172360 151530 144030 172940 192270 144140 141230 106420 190190 94861 137340 116540 125210 107440 145370 148480 175480 166510 172870 156440 150340 172660 192560 146330 147880 110540 189080 97060 131780 110540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35055000 1255 885 1200 2301 1890 1890 1 9606 Homo sapiens 0.023781205977570608 AIEEQMVAAK Unmodified 1088.5536 0.55359527 4491 Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 yes no 0 0 0 4 0 1 49.399 49.434 3 0.0018296 13730 20230619_1883_Aki_TMTPro18x_K_F4 86.882 75.717 98994 81001 93554 101800 107570 114260 94588 101830 129420 125210 121180 123000 136390 112910 121090 142050 143520 139100 91495 74330 95726 101240 110320 114330 97235 105490 129620 125260 125390 124640 138000 118360 124750 142050 137070 132160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149500000 1256 4491 1201 2302 1891 1891 1 9606 Homo sapiens 0.012860620173796633 AIEFCIAR Unmodified 978.49569 0.49568646 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 7.5 0.5 1 1 52.202 52.277 2 0.0078574 14583 20230619_1887_Aki_TMTPro18x_K_F7 117.18 83.626 206420 183070 197150 196920 200880 225840 218440 214930 233160 174430 177370 157600 174950 150920 190060 188200 192250 178930 190900 167690 201100 198210 208870 225980 219680 219240 234310 178060 184440 160690 179400 157870 193100 188020 183830 170100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 256110000 1257 1552 1202 2303;2304 1892;1893 1892 2 9606 Homo sapiens 0.005578448826327076 AIEINPDSAQPYK Unmodified 1444.7198 0.71980898 1242 B4E0U6;A0A140VKA6;P50502;Q0IJ56;Q1XBU6;B7ZA40;H7C3I1;Q3KNR6;Q8IZP2;Q8NFI4;F6VDH7 ST13;ST13P4;ST13P5 Hsc70-interacting protein;Putative protein FAM10A4;Putative protein FAM10A5 yes no 0 0 0 5.33 0.745 1 2 3 51.816 51.882 2;3;4 3.0361E-11 14550 20230619_1885_Aki_TMTPro18x_K_F5 240.41 207.19 331430 273640 286280 333100 291240 324430 303920 302040 375670 355980 389880 391700 406040 331560 344080 445800 419730 437610 306130 251010 294900 331360 302710 328260 307990 311670 379190 358020 399990 394150 410920 350070 355720 445370 400990 415660 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 593520000 1258 1242 1203 2305;2306;2307;2308;2309;2310 1894;1895;1896;1897 1896 4 9606 Homo sapiens 0.015237867269433991 AIEIYTDMGR Oxidation (M) 1183.5543 0.55432356 109 A0A024R0R9;P54920;M0R0Y2;M0R2M1;M0R058;M0R027;A0A024R0V6;M0R0I4 NAPA Alpha-soluble NSF attachment protein yes no 0 1 0 3.5 0.5 1 1 47.57 47.63 2 0.056002 12898 20230619_1883_Aki_TMTPro18x_K_F4 61.679 42.903 103430 84144 97017 108570 135150 135040 115760 116980 147950 116340 142790 120200 137930 118190 119710 136200 144910 142040 95589 77237 99709 107950 136800 134160 118830 120730 148590 117830 146350 121920 140090 122940 123530 136860 138380 134850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82516000 1259 109 1204 2311;2312 1898 1898 45 1 9606 Homo sapiens -0.030111433335605398 AIELFHSYR Unmodified 1134.5822 0.58219329 3586 P43378;Q6IQ43 PTPN9 Tyrosine-protein phosphatase non-receptor type 9;Protein-tyrosine-phosphatase yes no 0 0 0 1 0 1 48.516 48.516 3 1.0189E-08 13750 20230619_1880_Aki_TMTPro18x_K_F1 204.42 162.23 21603 17011 16373 20278 21549 21879 23260 27890 28975 19895 25668 22677 21872 21432 24577 23975 25584 23342 19931 15605 17168 20237 22025 22143 23530 27846 29020 20628 26309 22881 22594 22267 24996 24022 24454 22185 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16490000 1260 3586 1205 2313 1899 1899 1 9606 Homo sapiens 0.020285477088464177 AIELFSVGQGPAK Unmodified 1315.7136 0.71360139 1670 P30419;A0A7I2V539;Q96HI4;P30419-2;A0A7I2V3X4;A0A7I2V3U5;A0A7I2V4Y5;K7EN82;B7Z8J4 NMT1 Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase yes no 0 0 0 1.33 0.471 2 1 60.402 60.407 2;3 2.0427E-05 18783 20230619_1881_Aki_TMTPro18x_K_F2 118.31 86.881 80926 62581 71337 73633 68804 81254 73736 83800 82889 66060 68077 58222 63076 53777 74555 70118 67095 68049 74731 57402 73239 73578 71876 81632 74384 84925 83285 67490 70291 59381 65081 56491 75176 70099 64275 64652 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 420320000 1261 1670 1206 2314;2315;2316 1900;1901 1901 2 9606 Homo sapiens 0.0683731328608701 AIELNPANAVYFCNR Unmodified 1750.8461 0.8460889 1650 A0A7I2V697;A0A7I2V4T9;A0A7I2V2U2;A0A7I2V5Z3;A0A7I2V588;O43765;B4DEA6;K7EMD6 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 0 0 1.5 0.5 1 1 59.206 59.212 3 2.727E-25 18263 20230619_1881_Aki_TMTPro18x_K_F2 227.56 215.29 62967 56221 61971 60041 53925 59446 65864 63953 71177 72381 67733 62919 70888 58366 67042 83612 76241 70194 58249 51495 62903 60360 56966 60289 65896 65250 72099 72405 69770 64195 72067 61690 68839 82816 72816 66835 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 215390000 1262 1650 1207 2317;2318 1902;1903 1903 2 9606 Homo sapiens 0.0006996996057750948 AIELWYHDPACTTPVLK Unmodified 2013.003 0.002983473 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8;E5RIW1 XPO7 Exportin-7 yes no 0 0 0 8 0 1 60.582 60.614 3 1.9797E-13 18040 20230619_1888_Aki_TMTPro18x_K_F8 151.8 140.36 51650 40547 55935 50339 40348 53339 50525 51245 53403 62577 60752 59699 71078 59485 57955 79798 73348 73867 47780 37209 56203 50092 43471 53642 50488 52797 54587 62538 62424 60768 71598 62444 60134 79462 70033 70220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88598000 1263 2083 1208 2319 1904 1904 1 9606 Homo sapiens 0.03700210060219433 AIEMLGGELGSK Oxidation (M) 1219.6118 0.61183843 3406 P07954-2;A0A804HI24;A0A0S2Z4C3;P07954;A0A804HKE6 FH Fumarate hydratase, mitochondrial yes no 0 1 0 5.5 0.5 1 1 54.576 54.648 3 0.0054935 15904 20230619_1886_Aki_TMTPro18x_K_F6 69.229 47.031 37239 35276 42793 44469 37027 46854 45403 43798 50647 44693 38641 41333 43288 40886 38291 49006 47141 44818 34510 32356 42942 44184 39173 47112 45457 44989 50823 45038 40435 42097 43840 42598 39571 48853 45002 42621 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 423070000 1264 3406 1209 2320;2321 1905 1905 2021 1 9606 Homo sapiens 0.01081698872008019 AIEMLGGELGSK Unmodified 1203.6169 0.61692381 3406 P07954-2;A0A804HI24;A0A0S2Z4C3;P07954;A0A804HKE6 FH Fumarate hydratase, mitochondrial yes no 0 0 0 6.33 0.471 2 1 60.198 60.252 2;3 1.2953E-13 18216 20230619_1886_Aki_TMTPro18x_K_F6 184.44 156.24 227300 198620 221290 256390 216380 257240 268290 271800 308260 306630 293960 312610 329060 258110 300120 336560 303070 349620 210220 182270 225480 254160 226710 260330 268730 277600 311300 308160 303960 315190 333190 272330 306080 337570 290270 331760 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 693110000 1265 3406 1209 2322;2323;2324 1906;1907;1908 1906 3 9606 Homo sapiens 0.023260027346395873 AIENIDTLTNLESLFLGK Unmodified 1990.0623 0.062272491 1237 A0A140VK83;Q15435;Q15435-3;C9J177;Q15435-2;B5MBZ8;C9JD73;Q15435-5;Q15435-4;H7C003 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 0 7.5 0.5 1 1 67.325 67.345 3 0.00015303 20862 20230619_1888_Aki_TMTPro18x_K_F8 74.786 59.364 3675.7 1975.6 3550.3 4232.6 3420 2572.3 3739.8 3323 1980.2 4157 3068 2324.9 4100.6 2483.5 3284.1 3031.3 4588.4 1896 3390.5 1829.5 3617.3 4063.4 3557 2744.6 3700.1 3368.2 2172.9 4095.1 3137.9 2448.8 4107.5 2590.3 3422.9 2975.6 4358.9 1822.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13235000 1266 1237 1210 2325;2326 1909 1909 1 9606 Homo sapiens 0.10684384555406723 AIEPNDYTGK Unmodified 1106.5244 0.52440364 899 A0A090N7V5;O75223;M0QZK8;B3KMN7;O75223-3 C7orf24;GGCT Gamma-glutamylcyclotransferase yes no 0 0 0 4.5 0.5 1 1 45.315 45.376 2 2.8359E-06 11871 20230619_1883_Aki_TMTPro18x_K_F4 169.37 121.09 118720 90776 103770 98843 115180 114740 121110 112060 132870 137280 158860 156610 160030 136370 134950 160740 180010 169900 109620 83209 106780 99430 118840 114830 122140 115360 135740 137980 161780 157460 162130 142630 140290 161570 171730 161320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71409000 1267 899 1211 2327;2328 1910 1910 1 9606 Homo sapiens -0.024597590072289677 AIEPPPLDAVIEAEHTLR Unmodified 1970.0473 0.047291129 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 4.5 1.12 1 1 1 1 61.893 61.926 3 4.0349E-49 19152 20230619_1883_Aki_TMTPro18x_K_F4 287.91 249.96 669700 535450 660450 683040 578170 804240 722780 662490 855570 764390 739460 689140 834600 741840 704760 831860 775150 746650 619100 491480 670820 679140 612420 800340 724400 689480 859340 765340 767900 705090 842910 768080 723510 829460 740780 710180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4808800000 1268 3811 1212 2329;2330;2331;2332 1911;1912;1913 1912 3 9606 Homo sapiens 0.10106937478099098 AIEQADLLQEEDESPR Unmodified 1841.8643 0.86430096 11 A0A2R8YGH5;A0A024QYT6;P61966;H7C1E4 AP1S1 AP-1 complex subunit sigma-1A yes no 0 0 0 1 0 1 51.705 51.705 2 7.1745E-19 15064 20230619_1880_Aki_TMTPro18x_K_F1 206.18 190.29 15827 11420 16636 14437 14334 16874 15655 16229 20801 19297 20860 22684 24836 19643 22107 26334 21138 26999 14630 10485 16784 14370 15122 16861 15876 16704 20901 19445 21585 22777 25079 20722 22500 26378 20274 25615 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18424000 1269 11 1213 2333 1914 1914 1 9606 Homo sapiens -0.022956613743644994 AIETQCYVVAAAQCGR Unmodified 1795.8345 0.83453794 2261 B7Z410;B2R8D1;Q86X76-2;Q86X76-4;Q86X76;Q86X76-3 NIT1 Nitrilase homolog 1 yes no 0 0 0 8 0 1 50.432 50.508 2 4.5541E-06 13727 20230619_1888_Aki_TMTPro18x_K_F8 147.71 129.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1270 2261 1214 2334 1915 1915 1 9606 Homo sapiens -0.03154595125056403 AIETTDIISR Unmodified 1117.5979 0.59790293 1871 A0A994J4Y8;Q96HS1-2;Q96HS1;F5GXG4 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 0 0 0 4 0 1 47.325 47.367 2 0.00093274 12775 20230619_1883_Aki_TMTPro18x_K_F4 139.38 95.029 482700 400780 413910 477020 461180 497580 492220 488600 604990 614870 614770 608880 654980 530080 521490 710100 693160 631850 445860 367560 427270 475760 476370 501510 497980 503170 610560 614470 631840 615870 660850 558930 543130 705760 661130 601190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 510550000 1271 1871 1215 2335 1916 1916 1 9606 Homo sapiens 0.04380789435231236 AIFAGYK Unmodified 768.41703 0.41702544 2764 C9K025;P18077;F8WBS5;F8WB72 RPL35A 60S ribosomal protein L35a yes no 0 0 0 3 0.816 1 1 1 52.308 52.351 2 0.0054462 15164 20230619_1882_Aki_TMTPro18x_K_F3 140.79 97.544 1475200 1337600 1163900 1029900 1894200 3574000 1012000 1754700 3085300 142510 67765 178670 200850 175820 433150 195330 204320 196340 1362600 1222200 1219600 1098500 1903900 3375400 1134800 1871000 2896700 239450 217750 180780 213310 182440 422390 196820 197650 186500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 647650000 1272 2764 1216 2336;2337;2338 1917;1918 1917 2 9606 Homo sapiens 0.02355360639853643 AIFLADGK Unmodified 833.4647 0.46470391 343 A0A024R5K1;Q9BR76;A0A087WW53;F5H390;Q59F81;B4DIU2;Q9NSK3 CORO1B;DKFZp762I166 Coronin;Coronin-1B yes no 0 0 0 7.5 0.5 1 1 54.344 54.413 2 0.012976 15532 20230619_1887_Aki_TMTPro18x_K_F7 98.523 50.675 211650 176260 199700 201730 197630 219540 234610 224600 251960 279830 275460 297090 306550 254850 257290 315130 299390 314370 195630 161590 203860 201950 206460 220820 234970 230590 256820 280300 283000 299320 309520 267480 265150 315500 286150 298550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84413000 1273 343 1217 2339;2340 1919;1920 1919 2 9606 Homo sapiens 0.04131014840049829 AIFLADGNVFTTGFSR Unmodified 1714.8679 0.8678702 676 Q9ULV4-3;Q9ULV4-2;Q9ULV4;Q59EA2;A0A024RBI5;B3KN06;Q53G58;B4DMH3;B4E3S0;B7Z9V0 CORO1C Coronin-1C;Coronin yes no 0 0 0 3.5 0.5 1 1 63.764 63.783 3 6.4934E-26 19916 20230619_1883_Aki_TMTPro18x_K_F4 231.58 214.64 40018 37314 36037 46490 34060 36107 48647 36726 57241 45549 45851 56103 57624 40115 56267 58121 52835 57356 37006 34223 36980 46048 35928 37327 48422 37781 57340 45902 48179 55911 58314 42889 57061 58066 50616 54469 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 221490000 1274 676 1218 2341;2342 1921;1922 1922 2 9606 Homo sapiens 0.03903097980764869 AIFSHAAGDNSTLLSFK Unmodified 1777.8999 0.89989861 2379 B4DWA1;B4DMV0;B3KPV9;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-6;Q9UQB8-2;Q9UQB8;I3L3C6 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 2 0 1 58.561 58.574 3 0.012628 18036 20230619_1881_Aki_TMTPro18x_K_F2 58.814 45.097 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1275 2379 1219 2343 1923 1923 1 9606 Homo sapiens 0.04206465663924064 AIFTGYYGK Unmodified 1018.5124 0.51238239 160 A0A024R1T5;P09543-2;P09543;B4DI06;B4DFN6 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes no 0 0 0 4 0 1 55.606 55.615 2 0.0001184 16471 20230619_1883_Aki_TMTPro18x_K_F4 152.63 107.55 151300 136960 148010 159410 164500 183760 187100 186820 188420 173560 187280 155190 178710 151390 195070 195060 187130 173820 139970 125540 150970 159500 170140 184050 187380 190250 191780 175570 191690 158460 183430 158590 197630 194140 179030 165370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125760000 1276 160 1220 2344 1924 1924 1 9606 Homo sapiens 0.003866690402333006 AIFTTGQGASAVGLTAYVQR Unmodified 2010.0534 0.053439139 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5;Q9BWF4 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 5 0 1 61 61.05 3 3.5969E-30 18314 20230619_1885_Aki_TMTPro18x_K_F5 212.78 178.86 43127 39382 49581 47853 46777 43896 47755 44837 58228 47772 41008 31232 40279 31555 43286 44307 44507 40493 39956 36112 49763 47596 48770 44741 48420 45831 58033 47646 42798 32503 41268 33241 44035 44102 42544 38516 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 700210000 1277 2702 1221 2345 1925 1925 1 9606 Homo sapiens 0.08881455709592956 AIGAVPLIQGEYMIPCEK Unmodified 1988.0111 0.011105318 1270 F8W787;A0A1B0GW44;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;V9HWI3;C9JH19;P07339;A0A1B0GU92;A0A1B0GU03;H7C469 CTSD;HEL-S-130P Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 0 0 0 8 0 1 62.962 62.987 3 0.014047 19088 20230619_1888_Aki_TMTPro18x_K_F8 55.755 36.431 21950 29578 29933 38361 26321 36124 38898 46041 36472 73810 88399 101790 105110 77464 51906 92753 93349 146430 20440 27111 29759 37986 27977 36907 38473 47077 39482 73852 88993 101190 104130 81649 56248 95806 89282 138310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278880000 1278 1270 1222 2346 1926 1926 1 9606 Homo sapiens 0.05662020985391791 AIGDHFYK Unmodified 949.46577 0.46576654 2230 Q6IAU5;B2R665;O15355;B4DDC8;B3KXL8;Q96IN7;Q59GB2 PPM1G Protein phosphatase 1G yes no 0 0 0 7.5 0.5 1 1 43.535 43.58 3 0.001686 10909 20230619_1888_Aki_TMTPro18x_K_F8 111.95 54.666 880020 737510 797680 908940 828210 897080 952490 872840 1032600 1151400 1211200 1108500 1294000 1028400 1023800 1348000 1258500 1162000 813220 676580 818320 903630 861210 907670 955650 901140 1055100 1147300 1236900 1125300 1304800 1080500 1060600 1338200 1201100 1106000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 873990000 1279 2230 1223 2347;2348 1927;1928 1928 2 9606 Homo sapiens -0.010987707910544486 AIGNIELGIR Unmodified 1054.6135 0.61349341 630 A0A024RAM4;P46821;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RGJ3;D6RCL2 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 7.5 0.5 1 1 54.456 54.522 2 9.0606E-05 15477 20230619_1888_Aki_TMTPro18x_K_F8 166.09 112.34 982640 798330 817770 1014200 695040 931640 868080 861020 984650 1023400 1056300 1131700 1022400 944990 1097200 1070000 1146500 1365100 907320 732680 843920 1005100 738140 946360 869140 889350 999490 1028800 1079700 1137200 1048600 987680 1117100 1089800 1098000 1292600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 623730000 1280 630 1224 2349;2350 1929 1929 1 9606 Homo sapiens 0.08837120742941806 AIGNTELENK Unmodified 1087.551 0.55095274 3579 P42285;A8K6I4;B4E3M6;H0YAC4 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 0 0 3.5 0.5 2 2 44.55 44.609 2;3 5.6199E-06 11556 20230619_1883_Aki_TMTPro18x_K_F4 160.53 39.029 175000 160890 174730 167780 204070 197580 199180 187320 228800 188320 230200 211950 231740 187830 207470 211640 247430 218910 161940 147330 177890 169380 209320 197450 202020 192130 231320 191080 236050 213390 235280 195850 213610 212720 236150 207950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 218820000 1281 3579 1225 2351;2352;2353;2354 1930;1931;1932 1932 3 9606 Homo sapiens 0.010679298840841511 AIGSASEGAQSSLQEVYHK Unmodified 1960.949 0.94903365 1160 A0A109NGN6;P28066;Q5U0A0;P28066-2 PSMA5 Proteasome subunit alpha type-5;Proteasome subunit alpha type yes no 0 0 0 7 0.816 1 1 1 48.707 48.785 3 5.8312000000000004E-86 13407 20230619_1886_Aki_TMTPro18x_K_F6 280.25 264.83 169860 140190 161770 190850 172960 220170 181690 189120 418300 213700 185810 185290 236480 162600 192910 232250 210460 223580 157020 128750 165380 188860 179770 219580 189750 195980 402890 214340 203660 188660 237550 172370 198110 231650 201290 212400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1075100000 1282 1160 1226 2355;2356;2357 1933;1934 1934 2 9606 Homo sapiens 0.006997091622224616 AIGTEPDSDVLSEIMHSFAK Unmodified 2146.0252 0.025235058 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6 IPO5;RANBP5 Importin-5 yes no 0 0 0 6.5 0.5 1 1 64.594 64.631 3 0.0033994 19908 20230619_1887_Aki_TMTPro18x_K_F7 67.449 52.835 36082 30416 34141 32195 29194 35134 35275 34030 34472 43634 39497 38203 54947 37091 27492 53359 52137 57647 33355 27863 34759 32430 30897 35288 35206 35096 35428 43403 40921 39017 54240 39222 29942 53508 49684 54687 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 403270000 1283 782 1227 2358;2359 1935 1935 1 9606 Homo sapiens -0.0019365505268069683 AIGTEPDTDVLSEIMNSFAK Unmodified 2137.0249 0.024900707 3281 O60518;B4DTX6 RANBP6 Ran-binding protein 6 yes no 0 0 0 7 0 1 66.74 66.763 3 2.9539E-16 20823 20230619_1887_Aki_TMTPro18x_K_F7 158.64 146.49 9228.2 5961.7 9544.3 9463.2 9289.5 9924.2 11290 10339 10478 10712 11006 7304.8 10260 9804.9 9386.4 7526.1 10074 11315 8524.3 5491 9665.7 9272.9 9714.1 10006 11242 10544 10742 10705 11211 7662.3 10459 9918 9587.7 7818.5 9640.6 10703 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10860000 1284 3281 1228 2360 1936 1936 1 9606 Homo sapiens 0.0018692522749006457 AIGVKPPR Unmodified 836.52322 0.52322184 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 1 4.5 0.5 1 1 37.55 37.618 3 0.01291 8476 20230619_1883_Aki_TMTPro18x_K_F4 76.774 68.842 233360 173300 196910 219770 294120 301810 249840 261900 347870 281430 325970 321700 322520 272110 284550 325220 351060 313050 215380 159100 204630 219140 296720 298090 257450 270740 347790 284780 335220 323160 327530 285080 293890 325190 334990 297600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 695350000 1285 3656 1229 2361;2362 1937;1938 1937 2 9606 Homo sapiens 0.09842116205174989 AIGVLTSGGDAQGMNAAVR Oxidation (M) 1802.8945 0.89449566 1831;3469 P17858;A0A8V8TMY4;Q01813 PFKL;PFKP ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, platelet type no no 0 1 0 7.5 0.5 1 1 48.214 48.292 3 2.1548E-10 12751 20230619_1887_Aki_TMTPro18x_K_F7 128.59 119.54 151170 121390 124600 147960 170190 185250 140210 154520 200380 112130 125630 116650 124670 105790 142920 156480 158410 121580 139560 111360 129590 147680 172540 183780 144940 158810 197490 115940 132350 118040 128210 112100 145920 154450 151160 115980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 269240000 1286 3469;1831 1230 2363;2364 1939 1939 1169 1 9606 Homo sapiens 0.02516418809818788 AIGVLTSGGDAQGMNAAVR Unmodified 1786.8996 0.89958103 1831;3469 P17858;A0A8V8TMY4;Q01813 PFKL;PFKP ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, platelet type no no 0 0 0 8 0 1 52.7 52.775 3 3.0585E-39 14723 20230619_1888_Aki_TMTPro18x_K_F8 244.05 228.11 97480 82541 102830 94791 95464 106290 103090 107810 121820 94853 103570 100840 110140 77026 109150 110430 86198 93307 90198 75667 103850 94930 99960 106650 104120 109670 122240 96762 107410 101350 112010 82048 109750 109480 82745 88779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326380000 1287 3469;1831 1230 2365 1940 1940 1 9606 Homo sapiens 0.03760722672427619 AIHEVFEVGVTSHR Unmodified 1579.8107 0.81068967 2809 D3DPT8;Q9HB90;B4DQ03;B4DQG4 RRAGC Ras-related GTP-binding protein C yes no 0 0 0 6.5 0.5 1 1 43.74 43.825 4 9.3482E-07 10847 20230619_1887_Aki_TMTPro18x_K_F7 132.97 115.6 19459 17212 20712 18629 21003 25495 24042 20209 30408 14722 22821 18800 19757 16082 17177 18476 18613 20794 18012 15768 20933 18795 21897 25137 24247 20876 30241 15335 23605 18837 20136 16810 17600 18655 17810 19717 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26671000 1288 2809 1231 2366;2367 1941 1941 1 9606 Homo sapiens 0.043976754950790564 AIHSWLTR Unmodified 982.53485 0.53484916 1228 P28070;A0A140VK46;B4DFL3 PSMB4 Proteasome subunit beta type-4 yes no 0 0 0 4.5 0.5 1 1 42.766 42.829 3 8.3415E-05 10752 20230619_1883_Aki_TMTPro18x_K_F4 167.24 111.67 38285 25553 31574 40524 32735 50265 40716 40161 220770 39577 34122 43586 53942 45719 46912 44890 47286 46260 35309 23532 32725 39778 34659 49795 45908 41717 206630 40633 44634 44108 54189 47048 47831 45217 45232 43927 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143340000 1289 1228 1232 2368;2369 1942 1942 1 9606 Homo sapiens 0.04288313228516927 AIIASNIMYIVGQYPR Unmodified 1807.9655 0.96547575 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;A0A7I2YQX3;B3KWD0 XPO1 Exportin-1 yes no 0 0 0 8 0 1 64.683 64.703 3 2.8834E-12 19833 20230619_1888_Aki_TMTPro18x_K_F8 168.89 147.95 8981.4 14871 18369 7625.4 36723 18963 25807 27425 20756 9129.9 8729.8 9532.3 13064 7619.6 23872 11551 13644 12480 8429.8 13538 18068 8504.3 36182 18583 26489 26910 20944 10220 9753.2 9613.7 13682 8149.1 23450 11634 13146 11848 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84977000 1290 3228 1233 2370 1943 1943 1 9606 Homo sapiens 0.09381163585294416 AIIDEFEQK Unmodified 1091.5499 0.5498901 2356 B4E0B7;B3KMS0;Q15021;B3KY03 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 2.5 0.5 1 1 58.262 58.284 3 3.7393E-05 17714 20230619_1882_Aki_TMTPro18x_K_F3 150.36 94.992 59641 51467 58618 64044 56073 70184 60358 57889 69412 77017 75915 67170 77561 66692 68683 78654 74533 73599 55159 47214 59632 63711 58637 70208 60909 60510 70509 76523 77589 68645 78687 69445 70376 78542 71250 69962 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55780000 1291 2356 1234 2371;2372 1944 1944 1 9606 Homo sapiens 0.007777155151870829 AIIEDLEPR Unmodified 1054.5659 0.56587452 3041 Q86VS8;H0YDM4 HOOK3 Protein Hook homolog 3 yes no 0 0 0 2 0 1 55.036 55.057 2 0.061776 16583 20230619_1881_Aki_TMTPro18x_K_F2 65.305 38.921 62615 51722 62460 70784 56856 64297 73678 67965 77709 72871 78234 80782 91503 73911 82798 92259 87087 86053 57901 47504 63437 69819 59951 65581 73433 69352 78948 73631 80852 81446 92527 77440 84635 92047 83276 81803 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17040000 1292 3041 1235 2373 1945 1945 1 9606 Homo sapiens 0.040774217520947786 AIIESDQEQGRK Unmodified 1372.6947 0.69465686 897 A0A090N7T9;Q12765;Q12765-2;A0A024RA21;Q12765-3;B4DH22;B4DIV7 SCRN1 Secernin-1 yes no 0 0 1 3.5 0.5 1 1 37.631 37.679 3 0.00058656 8579 20230619_1883_Aki_TMTPro18x_K_F4 93.772 60.773 72765 52706 63744 81499 82017 76609 77103 78407 103550 84704 104690 94494 95462 94389 96465 93310 108300 91015 67166 48503 65866 79818 83571 77887 78838 80168 103960 85621 106880 95529 97868 97238 98703 93692 103380 86534 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 586520000 1293 897 1236 2374;2375 1946 1946 1 9606 Homo sapiens 0.02321731924348569 AIIFCETK Unmodified 980.5001 0.50010314 2610 B4DW97;Q9BQ39;B4DED6;Q9NTA9;K0J110 DDX50;DKFZp761E0323;mcdrh ATP-dependent RNA helicase DDX50 yes no 0 0 0 8 0 1 53.462 53.536 2 0.0021117 15067 20230619_1888_Aki_TMTPro18x_K_F8 119.29 76.264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1294 2610 1237 2376 1947 1947 1 9606 Homo sapiens 0.00907309305534909 AIIIFVPVPQLK Unmodified 1336.8482 0.84824438 3703 P62081;B5MCP9 RPS7 40S ribosomal protein S7 yes no 0 0 0 6.5 0.5 1 1 69.788 69.836 3 9.3144E-05 20084 20230619_1887_Aki_TMTPro18x_K_F7 111.06 96.383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1295 3703 1238 2377;2378 1948;1949 1949 2 9606 Homo sapiens 0.19329418498659834 AIILAAAPGEK Unmodified 1052.623 0.62299547 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;B3KVA0;K7ENW7 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 8 0 1 53.861 53.932 3 3.5064E-05 15221 20230619_1888_Aki_TMTPro18x_K_F8 113.93 96.696 75328 60996 75627 71854 58374 69875 71365 65610 85139 92413 78404 85755 90053 67997 64579 91337 86618 80900 69652 55939 76518 71675 62406 70720 71649 68065 85765 91745 81288 86700 90292 71991 67478 90748 82622 76971 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214020000 1296 442 1239 2379 1950 1950 1 9606 Homo sapiens 0.09878889028459525 AIILNTPHNPLGK Unmodified 1386.7983 0.79833407 2607 B4DW13;Q6YP21-3;Q6YP21;A0A0A0MRN7 hCG_23341;CCBL2 Kynurenine--oxoglutarate transaminase 3 yes no 0 0 0 4 0 1 51.607 51.634 3 1.7348E-05 14732 20230619_1883_Aki_TMTPro18x_K_F4 126.34 108.08 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1297 2607 1240 2380 1951 1951 1 9606 Homo sapiens 0.120406838226927 AIITDSVK Unmodified 845.48583 0.48583328 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 6.5 0.5 1 1 47.855 47.94 2 0.00044826 12635 20230619_1887_Aki_TMTPro18x_K_F7 163.77 82.14 436150 335770 370920 391150 436010 483630 399680 419770 510320 408370 443700 411230 394000 326710 447200 444650 495610 363320 402640 307960 383270 391710 447150 480600 408580 432850 510680 413620 456080 414710 406280 345920 456420 440450 472810 346430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 245130000 1298 4386 1241 2381;2382 1952 1952 1 9606 Homo sapiens 0.056909801489041456 AILCLLLGGVER Unmodified 1312.7537 0.75369207 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 5.5 0.5 1 1 65.903 65.946 2 1.0891E-12 20553 20230619_1885_Aki_TMTPro18x_K_F5 202.97 154.18 231710 178270 182070 196590 148710 195010 199930 184840 216650 236450 239270 239040 255000 231320 218970 290470 251280 288980 213790 163420 188700 197080 158860 197090 199170 191000 220750 236290 245100 242380 258160 241940 225500 290640 240370 274350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 341640000 1299 1104 1242 2383;2384 1953;1954 1953 2 9606 Homo sapiens 0.10982536685014566 AILEVLQS Unmodified 871.50148 0.50148335 316 A0A140VJH7;A0A024R529;Q3LXA3;Q9UFX5 DAK;DKFZp586B1621 Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes no 0 0 0 5.5 0.5 1 1 64.175 64.221 2 0.0022345 20027 20230619_1886_Aki_TMTPro18x_K_F6 129.96 119.97 24985 20591 23987 26763 24042 29253 27710 29411 34633 21674 26946 33966 27163 26638 34617 30472 35464 38640 23096 18901 24472 26550 25100 29382 27940 29833 34532 22711 28085 33669 28103 27908 35094 31029 33945 36602 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149740000 1300 316 1243 2385;2386 1955 1955 1 9606 Homo sapiens 0.060592666659431416 AILGEQRPR Unmodified 1038.5934 0.59342667 3072 H3BQ53;Q9BQ70;H3BSS3 TCF25 Transcription factor 25 yes no 0 0 1 1 0 1 34.146 34.146 3 0.00079392 7642 20230619_1880_Aki_TMTPro18x_K_F1 98.033 35.833 72706 57556 72107 71920 78373 81356 79700 77969 95950 82885 106740 107620 103340 89043 94966 93863 113700 104630 67211 52820 73385 71585 80926 81489 80801 80036 97186 84279 108860 107510 105190 92708 97736 94867 108540 99299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46453000 1301 3072 1244 2387 1956 1956 1 9606 Homo sapiens 0.0756736980297319 AILGSVER Unmodified 843.48142 0.48141661 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2;A2RTX5-2;B7ZLP8;A2RTX5 TARS;TARSL2 Threonine--tRNA ligase, cytoplasmic;Probable threonine--tRNA ligase 2, cytoplasmic yes no 0 0 0 6 0.816 1 1 1 44.212 44.297 2 0.0014551 11327 20230619_1886_Aki_TMTPro18x_K_F6 142.36 86.271 286100 189190 228540 243540 233530 262040 281630 247130 306220 309030 315980 317980 375730 306490 314690 387690 376190 326540 263790 173810 237130 241720 243640 263220 281860 255270 311050 309330 326350 322140 378640 320790 324850 384680 359000 310980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 591710000 1302 2326 1245 2388;2389;2390 1957 1957 1 9606 Homo sapiens 0.05341515726001944 AILILDNDGDR Unmodified 1213.6303 0.63026569 650 Q53FU3;A0A024RB72;F8VVA7;P61923;F8VXB1;F8W156;F8VYZ4;P61923-5;P61923-4;F8VUC5;F8W651;F8VXR1 COPZ1 Coatomer subunit zeta-1 yes no 0 0 0 2.5 0.5 1 1 55.507 55.538 2 1.4503E-12 16591 20230619_1882_Aki_TMTPro18x_K_F3 215.06 169.34 222970 164830 190480 226830 192610 249680 225110 222090 273940 271400 261190 264130 286040 240570 249560 300330 277700 308070 205800 151460 196500 224170 201210 249970 226590 230130 275880 271480 269670 267680 289420 252140 256250 301110 265640 292420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 518270000 1303 650 1246 2391;2392 1958;1959 1959 2 9606 Homo sapiens 0.03199576838210305 AILPCQDTPSVK Unmodified 1327.6806 0.6805867 1222 A0A140VK27;P09960;B4DVZ8;P09960-2;P09960-4;Q59ES1;P09960-3 LTA4H Leukotriene A-4 hydrolase;Leukotriene A(4) hydrolase yes no 0 0 0 7.5 0.5 1 1 50.426 50.504 3 0.016659 13783 20230619_1887_Aki_TMTPro18x_K_F7 43.672 23.343 142440 110400 131870 130170 193670 216920 180200 170290 216680 200100 212050 201040 218310 191540 207570 231190 216830 201130 131590 101270 135780 130960 196010 211690 183520 177910 218500 200770 217990 203820 222140 199910 211890 229960 207260 191410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 570340000 1304 1222 1247 2393;2394 1960 1960 1 9606 Homo sapiens 0.029853631717060125 AILQATLREEK Unmodified 1270.7245 0.72450043 1746 A0A8C8MUD1;Q12904;Q12904-2;B4DNK3;A0A804HJ47;A0A5F9ZHC5;D6R937 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 0 1 8 0 1 49.045 49.111 3 5.6823E-06 13120 20230619_1888_Aki_TMTPro18x_K_F8 145.31 112.79 432410 376330 405220 393040 439480 401430 450390 464560 463930 359810 382840 331660 370360 265530 427420 389470 385940 327550 399790 344660 414230 396040 453400 407120 453990 467380 468350 368400 395930 336130 380760 282800 431100 386060 369260 311980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1197500000 1305 1746 1248 2395 1961 1961 1 9606 Homo sapiens 0.09996715660372502 AILQNHTDFK Unmodified 1185.6142 0.6142217 4198 Q86X55-1;Q86X55;K7EQA8;Q86X55-2 CARM1 Histone-arginine methyltransferase CARM1 yes no 0 0 0 8 0 1 44.874 44.902 3 3.603E-07 11444 20230619_1888_Aki_TMTPro18x_K_F8 175.66 119.98 277830 219980 267770 284600 252270 277170 265310 258320 281070 314130 358840 352750 353870 298210 313800 379950 366680 353700 256770 201950 272680 281990 263610 280430 267410 266810 288650 315590 364220 354620 359400 313670 323080 378850 350240 336270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 272650000 1306 4198 1249 2396 1962 1962 1 9606 Homo sapiens 0.02883915391953451 AILSNEATK Unmodified 945.51311 0.51311067 1889 A1LT96;A0AVT1;B3KSS1;A0AVT1-2 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 0 6 0 1 44.439 44.528 2 9.3456E-06 11462 20230619_1886_Aki_TMTPro18x_K_F6 193.38 166.42 83231 55143 71375 76047 99964 105700 82527 83100 113430 96193 92230 93495 102300 83951 98374 95403 114670 100850 76779 50697 73935 75431 101160 104110 85156 86780 112980 96502 96080 94691 103910 87550 100970 96010 109460 95779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65586000 1307 1889 1250 2397 1963 1963 1 9606 Homo sapiens 0.03817463689267697 AILSTKPPGTFLLR Unmodified 1512.9028 0.90279914 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2YQI1;A0A7I2V4R2;B7ZA24;P40763-3;P40763-2;A0A7I2YQD2;A0A7I2V4R3;A0A7I2V395;A0A7I2V2G1;A0A7I2V552;B5BTZ6 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 0 1 7.5 0.5 1 1 57.38 57.433 3 0.0146 16830 20230619_1887_Aki_TMTPro18x_K_F7 65.092 51.43 33057 31977 36374 40219 46666 56292 46227 51452 61805 38256 36498 35549 39955 36842 44464 43722 39500 38511 30627 29327 36863 40141 47699 55567 47101 52513 61014 39342 38799 36285 40911 38307 44856 43543 37834 36637 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191340000 1308 1660 1251 2398;2399 1964 1964 1 9606 Homo sapiens 0.166863855793963 AILVDLEPGTMDSVR Oxidation (M) 1630.8236 0.82362212 1486;983;1424;3870 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;G3V5W4;G3V2R8;G3V3R4;G3V2N6;A0A384MEE3;Q9BVA1;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;B4DMJ5;Q13885;B2R6L0;A5D907;A5D906 TUBB3;TUBB2B;TUBB;TUBB2A Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta chain;Tubulin beta-2A chain no no 0 1 0 3.67 1.49 1 1 2 2 2 1 58.651 58.679 2;3 1.318E-10 17825 20230619_1882_Aki_TMTPro18x_K_F3 148.72 136.17 208630 178580 187970 208100 208570 202830 192030 197360 207970 212300 238270 213320 214940 182680 233090 219550 206920 232770 192810 163720 193030 207690 214410 205510 195180 202440 212220 213760 241910 215570 220910 191430 235200 220830 198420 220850 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3260199999.9999995 1309 983;1424;1486;3870 1252 2400;2401;2402;2403;2404;2405;2406;2407;2408 1965;1966;1967;1968 1966 548 4 9606 Homo sapiens 0.03344325772263801 AILVDLEPGTMDSVR Unmodified 1614.8287 0.8287075 1486;983;1424;3870 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;G3V5W4;G3V2R8;G3V3R4;G3V2N6;A0A384MEE3;Q9BVA1;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;B4DMJ5;Q13885;B2R6L0;A5D907;A5D906 TUBB3;TUBB2B;TUBB;TUBB2A Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta chain;Tubulin beta-2A chain no no 0 0 0 4.78 1.31 2 2 2 2 1 61.857 61.892 2;3 9.4269E-25 19192 20230619_1882_Aki_TMTPro18x_K_F3 298.78 226.13 853370 725480 763020 804360 617910 766710 754470 788830 796640 896060 981400 893920 990480 849990 957790 1023100 987570 1066400 788590 664840 780720 805700 657840 778740 754720 807270 816820 899560 998140 906670 1009000 887500 976560 1027600 945160 1012100 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 19915000000 1310 983;1424;1486;3870 1252 2409;2410;2411;2412;2413;2414;2415;2416;2417 1969;1970;1971;1972;1973;1974 1969 6 9606 Homo sapiens 0.04588629634895369 AIMAQLPQEQK Unmodified 1255.6595 0.65945733 1411 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;P35221-3;B3KSR8 CTNNA1 Catenin alpha-1 yes no 0 0 0 7 0 1 51.264 51.341 3 0.011682 14206 20230619_1887_Aki_TMTPro18x_K_F7 66.595 44.825 107390 86985 109530 97837 121580 133930 130210 125260 159520 153440 155830 190630 202110 169570 152740 202040 212650 213220 99312 79739 111210 98445 125590 132510 131680 129290 160760 154720 162270 191050 202510 177320 159750 202980 202880 202400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61766000 1311 1411 1253 2418 1975 1975 1 9606 Homo sapiens 0.04185397862852369 AIMGSGKEDYTGK Oxidation (M) 1371.634 0.63403044 3636 P52788;B4DE40;P52788-2;H7C2R7 SMS Spermine synthase yes no 0 1 1 6.5 0.5 1 1 41.035 41.116 3 0.042724 9707 20230619_1887_Aki_TMTPro18x_K_F7 54.806 43.098 63240 57507 63449 58578 78094 51944 75596 66238 57566 78610 101930 60520 69851 45614 90713 46200 53815 26105 58518 52649 64587 59055 79554 53491 75838 67027 61460 78152 100850 61835 73118 47620 89586 45464 51655 25109 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57945000 1312 3636 1254 2419;2420 1976 1976 2327 1 9606 Homo sapiens -0.03692121450239938 AIMYEETTYSK Unmodified 1334.6064 0.60641871 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 5 0 1 51.086 51.161 2 0.0033006 14251 20230619_1885_Aki_TMTPro18x_K_F5 96.331 72.345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1313 1853 1255 2421 1977 1977 1 9606 Homo sapiens -0.047500247104608206 AINCPEDIVFPALDILR Unmodified 1955.0186 0.018633537 4702 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 7.5 0.5 1 1 65.765 65.787 2 1.5684000000000002E-24 20414 20230619_1887_Aki_TMTPro18x_K_F7 266.97 220.08 32309 24051 33489 33575 27463 31589 34860 34516 32458 36161 35170 37559 42925 34411 32303 44367 36606 46561 29868 22104 33833 33100 29194 32151 34663 35110 33338 36485 36308 37968 43044 36142 33343 44507 35052 44164 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 140440000 1314 4702 1256 2422;2423 1978 1978 1 9606 Homo sapiens 0.07932496577291204 AINFNFGYAK Unmodified 1143.5713 0.57129425 2024;1277 A0A1B0GVU9;Q9H3A5;Q9BUZ3;B4DDN1;A0A0U1RR66;Q53HS0;A8K3A8;P47897-2;P47897;B4DNN3;C9J165 QARS Glutamine--tRNA ligase no no 0 0 0 4 0 1 59.9 59.902 3 0.0023335 18300 20230619_1883_Aki_TMTPro18x_K_F4 82.749 52.765 29445 26283 27177 25049 31406 41065 34941 34046 43581 13363 13611 13402 14692 11436 17249 14429 17279 14169 27226 24051 27860 25627 32450 40138 35261 34703 42613 14677 15431 13560 15092 12024 17479 14447 16510 13472 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28171000 1315 1277;2024 1257 2424 1979 1979 1 9606 Homo sapiens 0.005251453345636037 AINIGQLVDVK Unmodified 1168.6816 0.68157298 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 0 1 0 1 61.732 61.732 3 0.0045219 19188 20230619_1880_Aki_TMTPro18x_K_F1 71.555 47.998 21545 24006 22399 25590 19563 30544 27496 22760 32158 27228 32101 26663 28944 28649 30372 31934 30974 34167 19974 21973 22675 25777 20829 30319 27396 23927 32461 27290 32768 27191 29735 29649 30903 32160 29652 32417 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18384000 1316 1532 1258 2425 1980 1980 1 9606 Homo sapiens 0.10397945602926484 AINNYNPK Unmodified 932.47158 0.4715802 881 Q96MZ5;A0A087X0Q1;Q7Z739;Q8NA80;A0A024R7W5;B4DPX9;A0A087WY31;Q658Z6;Q8N3V9 YTHDF3;DKFZp451J085;DKFZp451A052 YTH domain-containing family protein 3 yes no 0 0 0 8 0 1 41.466 41.463 3 0.0065767 10061 20230619_1888_Aki_TMTPro18x_K_F8 77.058 45.686 28051 20971 34416 36574 41206 44485 40673 39114 45607 35635 41419 42182 43319 35078 36450 29682 46031 41309 25972 19327 34549 35727 42225 44235 41188 40245 45986 36420 42777 42263 43821 36157 37672 30593 43916 39130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14838000 1317 881 1259 2426 1981 1981 1 9606 Homo sapiens 0.0026432772060616117 AINPINTFTK Unmodified 1117.6132 0.61315906 3810 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 0 3 0 1 54.948 54.994 3 0.088717 16375 20230619_1882_Aki_TMTPro18x_K_F3 37.343 19.479 121210 92218 115230 131570 123720 153420 141230 135730 161120 218360 228280 175760 193200 155820 207200 171560 158210 162420 111990 84765 117810 129850 128470 153010 142030 142060 165870 214880 229190 179710 198770 162300 207560 171790 151880 154350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54896000 1318 3810 1260 2427 1982 1982 1 9606 Homo sapiens 0.05905701023084475 AINQGGLTSVAVR Unmodified 1284.715 0.71499837 1226 G3V295;A0A140VK44;G3V5Z7;P60900;P60900-2;G3V3I1;G3V3U4;Q9BZ93 PSMA6 Proteasome subunit alpha type;Proteasome subunit alpha type-6 yes no 0 0 0 2 0 1 45.831 45.913 2 2.1928E-06 12561 20230619_1881_Aki_TMTPro18x_K_F2 145.14 107 235520 158920 210210 242910 217690 275450 227970 210730 592780 232300 219700 217300 246980 162020 236680 267990 251740 249930 217340 146270 215980 238640 226950 274400 240080 220430 567150 234100 243990 219500 250610 174780 241850 266470 240710 237580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 289020000 1319 1226 1261 2428 1983 1983 1 9606 Homo sapiens 0.08402947374838732 AINQQTGAFVEISR Unmodified 1532.7947 0.79470526 3197 M0R0C6;Q92945;A0A384P5V3;M0R3J3 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 7.2 0.748 1 2 2 50.242 50.32 2;3 9.6794E-16 13688 20230619_1887_Aki_TMTPro18x_K_F7 222.25 157.22 134000 117860 121080 142760 126600 149790 145740 139190 156880 168270 159690 162580 177150 141050 166920 175910 173210 185200 123870 108080 124310 142190 131680 150680 146180 143740 159410 168310 164520 164550 179690 148130 170320 176710 165750 175760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1327000000 1320 3197 1262 2429;2430;2431;2432;2433 1984;1985 1984 2 9606 Homo sapiens 0.04961969258215504 AINVLLEGNPDTHSWEMVGK Oxidation (M) 2225.0787 0.078667612 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;Q5VU77;Q5VU79;Q5VU78;Q5VU81;Q5VU80;Q14157-1;Q14157-4 UBAP2L Ubiquitin-associated protein 2-like no no 0 1 0 6.5 0.5 1 1 60.664 60.706 3;4 1.2826E-07 18132 20230619_1887_Aki_TMTPro18x_K_F7 107.33 91.905 35369 34349 45460 46599 38849 46608 41960 49593 57255 52620 46386 49055 53751 50025 50901 58332 48350 57778 32820 31527 45249 46053 40987 47180 42632 50517 57045 52921 48447 49995 54519 51996 51715 58435 46351 54849 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20295000 1321 3877;3878 1263 2434;2435 1986;1987 1987 2542 2 9606 Homo sapiens 0.01513142449903171 AINVLLEGNPDTHSWEMVGK Unmodified 2209.0838 0.08375299 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;Q5VU77;Q5VU79;Q5VU78;Q5VU81;Q5VU80;Q14157-1;Q14157-4 UBAP2L Ubiquitin-associated protein 2-like no no 0 0 0 7 0 1 61.871 61.91 3 2.0193E-11 18661 20230619_1887_Aki_TMTPro18x_K_F7 133.24 125.96 970360 957530 1067300 1147300 754630 1085900 1168900 1108000 906100 1376600 1224100 1206800 1458000 1127300 1231000 1540100 1332400 1356000 899160 877690 1072400 1142400 820470 1102700 1147100 1137900 952800 1370600 1251300 1230400 1469000 1187800 1263000 1529800 1274000 1289800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 609170000 1322 3877;3878 1263 2436 1988 1988 1 9606 Homo sapiens 0.027574463124892645 AIPAGCGDEEEEEEESILDTVLK Unmodified 2532.1425 0.14250924 4131 Q6PUV4 CPLX2 Complexin-2 yes yes 0 0 0 2 0.816 1 1 1 64.539 64.552 3 7.4529E-10 20628 20230619_1881_Aki_TMTPro18x_K_F2 120.71 116.98 14201 11206 12087 4285.4 192.07 1284.6 2592.4 2988.3 2877 12582 10388 15201 14680 13352 13342 18085 13864 23941 13112 10211 12221 4901.5 1222.4 1591.4 2514.9 3193.4 3256.4 12262 10527 15234 14786 14090 13649 18405 13330 22640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73942000 1323 4131 1264 2437;2438;2439 1989 1989 1 9606 Homo sapiens -0.062276314849441405 AIPDLTAPVAAVQAAVSNLVR Unmodified 2075.1739 0.17388863 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B4DTM7;A0A096LPE1 VCL;HEL114 Vinculin yes no 0 0 0 5.5 0.5 1 1 67.423 67.466 3 3.6846E-45 21319 20230619_1886_Aki_TMTPro18x_K_F6 249.41 235.06 6906.5 5711.1 6949.3 7165.6 9905.5 9718.1 11386 10830 10161 8635.6 7125.6 7628.1 9057.5 9168.9 8558 9050.1 6741.6 7699.4 6387 5240.5 7103.6 7152.4 10078 9659.7 11349 10924 10303 8817.2 7546.2 7842.7 9167.8 9393.2 8614.1 9022.1 6474.5 7323.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94243000 1324 51 1265 2440;2441 1990 1990 1 9606 Homo sapiens 0.17930863703213618 AIPGVVEK Unmodified 811.48035 0.48035398 3579 P42285;A8K6I4;B4E3M6 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 0 0 7 0 1 48.277 48.364 2 0.0027269 12857 20230619_1887_Aki_TMTPro18x_K_F7 122.13 47.713 116180 95643 103640 120660 130180 135360 129150 136500 145940 151400 146670 147150 169960 125080 111500 165810 192020 166990 107340 87768 106820 119980 133070 135800 130800 139730 147860 152060 151390 148850 169900 132020 119140 165860 182780 158690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153300000 1325 3579 1266 2442 1991 1991 1 9606 Homo sapiens 0.06707301357084816 AIPLALEGK Unmodified 910.54877 0.54876789 4627 Q9NY93-2;Q9NY93;Q53HB9;G3V0G3;F8WDT8;F8WEI3 DDX56 Probable ATP-dependent RNA helicase DDX56 yes no 0 0 0 8 0 1 55.916 55.978 3 0.010093 16181 20230619_1888_Aki_TMTPro18x_K_F8 69.598 52.358 33546 24986 32274 34919 31744 36271 35580 32420 40591 34306 37692 31701 38598 30303 40055 36460 31877 35825 30992 22963 32900 34454 33134 36476 35804 33453 40931 34511 38817 32282 39404 31646 40236 36518 30606 34019 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45041000 1326 4627 1267 2443 1992 1992 1 9606 Homo sapiens 0.08991545936942202 AIPNNQVLGK Unmodified 1052.5978 0.59784335 3287 O60869-2;O60869-3;O60869 EDF1 Endothelial differentiation-related factor 1 yes no 0 0 0 1.5 0.5 2 2 47.425 47.463 2;3 5.8217E-07 13337 20230619_1880_Aki_TMTPro18x_K_F1 204.03 163.76 382420 357780 409110 423570 466560 438520 453890 446830 450080 366780 385710 291640 318190 253620 389570 323790 324170 254380 354130 327970 414220 422660 478940 442750 458320 453800 455960 372750 395370 298570 330100 266620 390890 320640 310310 242600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 442800000 1327 3287 1268 2444;2445;2446;2447 1993;1994 1993 2 9606 Homo sapiens 0.07364834225904815 AIPNQVIR Unmodified 909.5396 0.53960019 3619 P50570-3;P50570-2;K7EMQ3;B4DJ53;A0A024R7C9;Q9UPH5 DNM2 Dynamin-2 yes no 0 0 0 1 0 1 42.615 42.615 2 0.0026853 11159 20230619_1880_Aki_TMTPro18x_K_F1 122.79 81.288 78370 65898 73533 76202 86845 99546 95547 100920 110610 60042 71336 69710 61857 52702 88008 58342 78365 74563 72442 60415 75333 76439 89438 98901 96270 101880 110080 63233 74674 69786 64689 55244 88332 59540 75046 70662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37612000 1328 3619 1269 2448 1995 1995 1 9606 Homo sapiens 0.08121197371281141 AIPQGVTR Unmodified 840.48175 0.48175096 4143 Q71RC2-5;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2;Q71RC2-6;Q71RC2-3;Q8WVX5 LARP4 La-related protein 4 yes no 0 0 0 8 0 1 37.313 37.298 2 0.03816 8469 20230619_1888_Aki_TMTPro18x_K_F8 72.789 24.034 38934 27132 39399 40515 47641 58078 51592 50863 67130 45374 45338 43255 48115 37056 41538 40523 57091 45783 35971 24962 40130 40026 49003 57191 52240 52296 66577 46137 47642 43798 48707 38645 43199 40967 54396 43470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37978000 1329 4143 1270 2449 1996 1996 1 9606 Homo sapiens 0.05512935445858602 AIPQLQGYLR Unmodified 1157.6557 0.65569258 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7 RPL6 60S ribosomal protein L6 yes no 0 0 0 3.5 0.5 1 1 56.365 56.387 2 4.2157E-06 16713 20230619_1883_Aki_TMTPro18x_K_F4 168.66 95.62 152210 147980 136190 119100 166680 248030 176980 175700 235190 23208 21140 24304 26042 20095 57244 28362 28929 25151 140790 135210 140140 124470 171640 239260 179440 180330 227070 32130 32077 24621 27984 21308 55935 28282 27927 23937 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 872700000 1330 680 1271 2450;2451 1997 1997 1 9606 Homo sapiens 0.08317096151336045 AIPSDGNFAMR Unmodified 1177.555 0.55499226 1682 A0A7L4XSC9;A0A7M2JGN3;A0A7L4XVG2;Q53Y41;Q6IBS8;A0A7S6PWV5;B4DPL5;A0A7L4XVT7;A0A7L4XUZ5;A0A7S6PWV2;A0A3S5X9I4;A0A3Q8A2L5;P20711;P20711-3;A0A7L4XT01;A0A087WV24;A0A3S5WLQ6;A0A0S2Z3N4;A0A3Q7ZZZ2;A0A3Q7ZYN3;B4DPG2;A0A3S6CJ90;A0A3S6CVP2;A0A3S6CPU7;A0A3S6CS67;H7BZF7;A0A5C0B7Z4;A0A3S6CLD8;A0A5C0B937;A0A3S6CN46;A0A3S5X9H9;A0A3Q8A018;A0A3S6CJ93;A0A5C0BAW3;P20711-2;F8WER1 DDC Aromatic-L-amino-acid decarboxylase yes no 0 0 0 6.5 0.5 1 1 47.917 48 2 4.168E-05 12674 20230619_1887_Aki_TMTPro18x_K_F7 142.98 119.43 58630 44627 55755 67878 89994 115350 100240 90564 114170 97552 95603 92676 99142 82064 82506 98788 108300 98480 54168 41051 57519 67185 91177 112380 100800 94388 114750 98130 99084 93952 100300 85906 85698 98942 103310 93576 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89491000 1331 1682 1272 2452;2453 1998 1998 1 9606 Homo sapiens -0.026683038938244863 AIQDAILEVLK Unmodified 1211.7125 0.71253876 4200 Q86Y56;E9PGY2;B3KNN3;B3KPE2;A0A024R803;B3KU91;H0Y650;Q86Y56-3 DNAAF5;FLJ20397 Dynein assembly factor 5, axonemal yes no 0 0 0 8 0 1 65.173 65.192 3 0.00035143 20040 20230619_1888_Aki_TMTPro18x_K_F8 86.313 40.397 13705 11711 10402 11978 12772 9985 12227 15147 15194 14007 13595 16527 15674 12982 13180 16449 14451 13051 12651 10724 10880 12061 13045 10384 12458 15079 15252 14285 14133 16537 15811 13684 13534 16277 13805 12437 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28132000 1332 4200 1273 2454 1999 1999 1 9606 Homo sapiens 0.11515098917175237 AIQDEIR Unmodified 843.44503 0.4450311 3845 Q13257 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes yes 0 0 0 2 0 1 39.368 39.438 2 1.2495E-05 9546 20230619_1881_Aki_TMTPro18x_K_F2 155.51 55.443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1333 3845 1274 2455 2000 2000 1 9606 Homo sapiens 0.017046388292783377 AIQEHPVVLLPSHR Unmodified 1594.8944 0.89435972 2283 Q5TBH6;Q5TBH8;Q53H08;Q53FI2;B2RAG5;Q59EC9;O15228-2;O15228 GNPAT Dihydroxyacetone phosphate acyltransferase yes no 0 0 0 8 0 1 41.464 41.461 4 7.2483E-05 10056 20230619_1888_Aki_TMTPro18x_K_F8 100.4 86.24 28355 19463 25982 23593 35240 37422 29894 28666 43517 32746 35152 30880 33567 36026 28303 36076 35285 33101 26174 17867 26712 23669 35749 36594 30860 29987 43201 32868 36350 31629 34120 36959 29301 36070 33678 31479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41828000 1334 2283 1275 2456 2001 2001 1 9606 Homo sapiens 0.12070831662776982 AIQEWLK Unmodified 886.49125 0.49125301 316 A0A140VJH7;A0A024R529;Q3LXA3;Q9UFX5;I3L252;H0YCY6;Q3LXA3-2 DAK;DKFZp586B1621;TKFC Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes no 0 0 0 8 0 1 57.576 57.628 2 0.0094732 16810 20230619_1888_Aki_TMTPro18x_K_F8 124.08 65.439 93395 79636 86948 83506 84768 103560 107040 104640 111990 79887 91524 84347 83107 66699 105730 82681 94692 86202 86333 72943 88834 84340 88897 103220 106770 106150 112850 82233 94512 84882 86135 70251 106380 83105 90649 81869 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34755000 1335 316 1276 2457 2002 2002 1 9606 Homo sapiens 0.043467037313689616 AIQHENVDVR Unmodified 1179.5996 0.59963426 3856 Q13535-2;Q13535-3;Q13535;A0A590UJ01 ATR Serine/threonine-protein kinase ATR yes no 0 0 0 3 0 1 32.265 32.343 3 6.6912E-05 6509 20230619_1882_Aki_TMTPro18x_K_F3 135.99 98.511 60061 39064 80902 72608 106860 121350 94938 110250 106020 64717 93227 98522 82553 72347 85355 50968 96501 88416 55625 36057 80802 71165 108590 118660 96792 112100 106710 68919 95836 97556 84749 74383 87159 53782 92168 83610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15805000 1336 3856 1277 2458 2003;2004 2003 2 9606 Homo sapiens 0.017018432438362652 AIQLEYSEAR Unmodified 1178.5932 0.5931519 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O43242-2 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 3.5 0.5 1 1 46.625 46.685 2 2.2195E-05 12448 20230619_1883_Aki_TMTPro18x_K_F4 159.34 118.61 599610 462450 707590 615070 593410 705820 671690 647040 750420 736690 747380 762050 816480 680900 693670 908730 849160 833350 555070 424710 707570 609950 627650 705300 675470 667530 760060 740590 770020 770000 825350 717030 717310 904660 810850 792380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 523280000 1337 2361 1278 2459;2460 2005;2006 2006 2 9606 Homo sapiens 0.010999052924717034 AIQLSGAEQLEALK Unmodified 1469.809 0.80895834 1127 B3KM48;A0A0S2Z5H7;D6RAX7;Q9BT78;Q53FV3;D6RFN0;Q9BT78-2 COPS4 COP9 signalosome complex subunit 4 yes no 0 0 0 7 0 1 60.798 60.841 3 8.9731E-07 18147 20230619_1887_Aki_TMTPro18x_K_F7 127.36 97.812 134540 98503 117090 134270 97716 146830 137560 135080 158600 160800 144250 167850 178820 152920 146020 192180 184010 211320 124190 90509 120270 132770 104470 147120 137030 139520 159880 161370 150330 169520 179900 160350 151420 193410 175880 200410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227910000 1338 1127 1279 2461 2007 2007 1 9606 Homo sapiens 0.09284621686492756 AIQPQAAQGPAAVQQK Unmodified 1604.8635 0.86345352 4377 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR70 EP400 E1A-binding protein p400 yes no 0 0 0 8 0 1 43.39 43.4 3 3.6525E-11 10836 20230619_1888_Aki_TMTPro18x_K_F8 155.98 140.99 22889 17632 23053 21616 23958 28421 28459 26938 31091 26433 27936 23012 26071 23864 27995 27191 27540 28751 21158 16180 23416 21598 24948 28182 28509 27603 31381 26651 28704 23569 26771 24765 28405 27362 26363 27287 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7947600 1339 4377 1280 2462 2008;2009 2008 2 9606 Homo sapiens 0.085216335578707 AIQTLGYFPVGDGDFPHQK Unmodified 2089.0269 0.026890038 1731 A0A804HJA4;J3KN16;Q5VYK3;B3KXF2;R4GMY1 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 8 0 1 60.032 60.069 3 2.6364E-15 17805 20230619_1888_Aki_TMTPro18x_K_F8 166.91 146.75 40772 38098 36070 44187 42683 50133 41586 44910 49909 50125 47127 45854 52733 44799 48621 56805 52075 56149 37698 34917 37183 44194 43831 50124 42260 46369 50294 50257 48723 46727 53451 46889 49751 56829 49820 53322 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18535000 1340 1731 1281 2463 2010 2010 1 9606 Homo sapiens 0.02593766818245058 AIRDEAIYHFR Unmodified 1389.7153 0.71533272 581 H0YNB7;H0YL22;A0A7I2V4I7;A0A024R9L0;H0YNN4;Q9Y375 NDUFAF1 Complex I intermediate-associated protein 30, mitochondrial yes no 0 0 1 7.5 0.5 1 1 41.352 41.387 4 7.2662E-06 9808 20230619_1887_Aki_TMTPro18x_K_F7 127.17 102.88 53628 48796 54235 55578 54439 60079 63273 58584 69578 64948 67270 70493 66881 58922 64170 78719 71369 74553 49628 44717 55060 55648 56762 60391 63473 60140 70423 65472 69140 70932 68167 62187 65781 78510 68238 70844 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49852000 1341 581 1282 2464;2465 2011;2012 2011 2 9606 Homo sapiens 0.03606367094653251 AISEPNFSVAYANMCR Unmodified 1828.8236 0.8236389 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;C9J2Z7;C9K073 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 1 0 1 57.403 57.403 3 2.7479999999999997E-19 17419 20230619_1880_Aki_TMTPro18x_K_F1 201.76 194.53 31951 24373 29554 30222 24009 29515 26846 29039 32357 36391 29439 32561 36849 26340 28338 39381 32304 35343 29514 22369 30141 30036 25492 29885 27095 29892 32579 36255 30680 33008 36939 28087 29247 39103 30891 33601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114270000 1342 1676;2901 1283 2466 2013 2013 1 9606 Homo sapiens -0.05761997499325844 AISGLEQDQPAR Unmodified 1283.647 0.64697839 2605 H7C0E5;B4DVT8;H7BZM7;O75312 ZPR1 Zinc finger protein ZPR1 yes no 0 0 0 2 0 1 42.407 42.486 2 0.029854 10932 20230619_1881_Aki_TMTPro18x_K_F2 83.045 67.154 34890 23906 29049 39347 39276 44592 39058 39153 57341 42765 48907 61954 57147 50757 43013 63879 66980 72466 32184 22022 30214 38493 40040 44542 39937 40486 57002 43647 51003 61632 57440 53408 45426 64392 63892 68717 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46502000 1343 2605 1284 2467 2014 2014 1 9606 Homo sapiens 0.016500777242072218 AISGLEQDQPARR Unmodified 1439.7481 0.74808942 2605 H7C0E5;B4DVT8;H7BZM7;O75312 ZPR1 Zinc finger protein ZPR1 yes no 0 0 1 5 0 1 37.31 37.403 3 6.6888E-05 8448 20230619_1885_Aki_TMTPro18x_K_F5 110.38 82.898 47632 35752 41769 45451 55549 55195 48610 44498 52775 50927 63084 54084 59125 50201 54477 47345 64073 52964 43976 32823 43136 45218 56390 54846 49545 46384 53932 51240 64001 54647 60246 51770 55961 47972 61135 50286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40055000 1344 2605 1285 2468 2015 2015 1 9606 Homo sapiens 0.04580529426903013 AISGVHTVR Unmodified 938.52976 0.52976379 3571 P41091;Q2VIR3;Q2VIR3-2;H7BZU1 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 5.33 3.09 1 1 1 31.445 31.481 3 5.6577E-07 6142 20230619_1888_Aki_TMTPro18x_K_F8 169.09 125.96 75187 59432 85898 90783 101470 97024 82519 92920 84892 100450 107820 117060 105560 85898 92729 88984 118620 111110 69591 54665 86597 89148 103500 97550 84464 95398 87367 101550 109500 116940 107180 89839 95919 90631 113190 105330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107560000 1345 3571 1286 2469;2470;2471 2016;2017 2017 2 9606 Homo sapiens 0.05804009365908769 AISHEHSPSDLEAHFVPLVK Unmodified 2212.1277 0.12766671 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;C9J9C1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 6.5 0.5 1 1 49.449 49.53 5 2.3751E-16 13339 20230619_1887_Aki_TMTPro18x_K_F7 163.7 152.44 114460 99226 118870 143170 121410 144330 202530 209460 105520 126280 128110 158470 126930 90410 170530 155470 176470 209420 105910 91173 120670 141000 127850 147230 196510 207220 113940 132770 130720 157130 131550 99097 172890 158200 169020 198220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 652160000 1346 1860 1287 2472;2473 2018;2019 2019 2 9606 Homo sapiens 0.07008798801143712 AISSASSPQSPGDALR Unmodified 1542.7638 0.76379906 2331 B2RNR6;Q96KR1;B3KP82 ZFR Zinc finger RNA-binding protein yes no 0 0 0 6 0 1 42.241 42.335 3 2.3054E-06 10489 20230619_1886_Aki_TMTPro18x_K_F6 120.21 105.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1347 2331 1288 2474 2020 2020 1 9606 Homo sapiens 0.01412771153286485 AISSSAISR Unmodified 890.48214 0.48214489 3000 F8WJN3;Q16630-3;Q16630;Q16630-2;B4DSU9 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes no 0 0 0 7.5 0.5 1 1 36.669 36.696 2 0.00013235 8128 20230619_1888_Aki_TMTPro18x_K_F8 150.36 112.83 100080 59594 101360 94736 139030 158350 114410 123470 153750 44695 50326 41284 43000 38141 82458 33036 59063 37704 92392 54911 103380 93557 140870 154390 117950 126370 149950 49525 56200 42037 46040 39184 81577 33710 56589 35841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147300000 1348 3000 1289 2475;2476 2021 2021 1 9606 Homo sapiens 0.03252310375046363 AISSTEAVLNNR Unmodified 1273.6626 0.66262845 876;2447 B3KY61;U3KPZ7;Q9P2N5;D3DQF6;A0A087X0H9;Q5T8P6-5;Q5T8P6-4;Q5T8P6-3;Q5T8P6-2;Q5T8P6 RBM27;POU4F3;RBM26 RNA-binding protein 27;RNA-binding protein 26 no no 0 0 0 6 0 1 46.116 46.202 2 2.8383E-24 12199 20230619_1886_Aki_TMTPro18x_K_F6 263.43 223.36 53616 39797 44599 51310 52760 60384 50688 53973 65185 56417 65589 60065 71971 59462 54644 75549 73330 68279 49479 36543 46217 50975 54167 60214 51686 55638 65579 57030 67492 60859 72433 62203 57015 75193 69946 64947 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120420000 1349 2447;876 1290 2477 2022 2022 1 9606 Homo sapiens 0.036743642412375266 AISSYFVSTMSSSIK Unmodified 1606.7913 0.79125936 3298 O75367;O75367-3;O75367-1;B4DJC3;Q59FH0 H2AFY Core histone macro-H2A.1;Histone H2A yes no 0 0 0 5.5 0.5 1 1 62.618 62.667 3 8.6722E-19 19131 20230619_1885_Aki_TMTPro18x_K_F5 201.48 168.27 305590 232190 293340 337320 273890 381020 324270 339290 416370 303550 300730 290160 349550 276160 308860 386210 344940 323170 282350 213470 299080 332400 288180 380670 326880 348530 414040 308570 316040 294990 353230 291170 317200 382580 329540 307700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 689680000 1350 3298 1291 2478;2479 2023;2024 2023 2 9606 Homo sapiens 0.012135383693248514 AISTTCIPNYPDR Unmodified 1506.7137 0.71367774 4501 Q9H2J4;H7BZP2;B7Z6S0 PDCL3 Phosducin-like protein 3 yes no 0 0 0 7 0 1 48.168 48.254 3 3.7735E-06 12781 20230619_1887_Aki_TMTPro18x_K_F7 105.65 100.03 111990 81856 105140 117490 123370 135190 116040 122980 158710 134250 136530 143670 156560 133430 113460 156990 165360 153790 103430 75258 107720 115910 126590 135050 118750 126760 158370 135440 141980 145090 157170 139210 119230 157080 157640 146140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106120000 1351 4501 1292 2480 2025 2025 1 9606 Homo sapiens -0.019410547762390706 AITDGQAGFGNDTLSK Unmodified 1593.7635 0.76346471 881 Q96MZ5;A0A087X0Q1;Q7Z739;Q8NA80;A0A024R7W5;B4DPX9;A0A087WY31;Q8N3V9 YTHDF3;DKFZp451A052 YTH domain-containing family protein 3 yes no 0 0 0 5.5 0.5 1 1 51.98 52.055 3 3.6093E-19 14814 20230619_1886_Aki_TMTPro18x_K_F6 196.47 180.45 75721 59031 76405 75946 75840 92548 78222 79439 86174 96090 93133 93070 95610 79056 77820 98653 90251 103580 70002 54193 77552 75519 78956 91997 79016 82491 87690 96114 95316 94135 96643 83075 80254 99033 86324 98284 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230270000 1352 881 1293 2481;2482 2026 2026 1 9606 Homo sapiens -0.009666485665775326 AITGASLADIMAK Oxidation (M) 1276.6697 0.66968766 1864 C9JXB8;A0A994J4A5;C9JNW5;V9HW01;P83731 RPL24;HEL-S-310 60S ribosomal protein L24 yes no 0 1 0 8 0 1 54.967 55.033 3 1.7577E-05 15702 20230619_1888_Aki_TMTPro18x_K_F8 117.79 86.92 348850 333970 310160 424080 322240 378200 408480 426230 330430 421750 454060 373980 410110 362940 417000 418420 412340 394780 322610 306330 319240 420150 336050 386950 404610 432030 346230 424710 457710 381790 420280 377650 423660 418310 394440 375280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1504599999.9999998 1353 1864 1294 2483 2027 2027 1194 1 9606 Homo sapiens 0.04241960797412503 AITGIQAFTASK Unmodified 1206.6608 0.66083754 446 Q92947;A0A2L2DH10;A0A2L2DH39;A0A2L2DH25;A0A2L2DH19;A0A2H4G235;A0A2H4G1S8;A0A2H4G0V0;A0A2H4FWZ7;A0A2H4FX81;A0A2H4FX57;A0A2H4FX55;B4DK85;A0A024R7F9;B4DUY0;A0A2H4G245;A0A2L2DH21 GCDH Glutaryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 4 0 1 56.913 56.918 3 0.00015633 17037 20230619_1883_Aki_TMTPro18x_K_F4 77.913 5.6223 97497 82209 85213 89905 89680 98361 93566 94746 106890 103860 103590 89917 102730 88565 116830 105860 102460 104130 90076 75330 87673 90308 92942 98773 94547 97273 108020 104070 106360 91926 105530 92330 117700 106050 98183 98913 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 347630000 1354 446 1295 2484 2028 2028 1 9606 Homo sapiens 0.0657735522324856 AITHLNNNFMFGQK Oxidation (M) 1649.7984 0.79841043 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;M0QYT0;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 1 0 4 0.816 1 1 1 50.135 50.197 3 4.861E-09 14200 20230619_1882_Aki_TMTPro18x_K_F3 160.18 145.75 386760 288120 365090 410180 415340 387540 400970 425950 450420 425770 414100 398680 407220 331100 435610 491820 436120 445240 357260 264850 373580 403820 426580 394570 406770 432470 454730 429410 426300 403920 417110 352300 442810 488850 417340 423350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1217100000 1355 1455;1520 1296 2485;2486;2487 2029;2030 2029 957 2 9606 Homo sapiens -0.0004968423963873647 AITHLNNNFMFGQK Unmodified 1633.8035 0.8034958 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;M0QYT0;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 0 0 4.5 0.5 1 1 53.326 53.372 3 1.0098E-16 15522 20230619_1883_Aki_TMTPro18x_K_F4 210.41 194.04 841300 731780 833560 943380 763880 942040 934950 967660 1019900 1023500 952330 962000 1113300 852660 1066500 1109200 1045700 1022300 778170 671540 847180 935210 804310 952960 935620 988270 1032000 1029400 987620 975830 1128200 897110 1084300 1105600 1000500 971970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1645499999.9999998 1356 1455;1520 1296 2488;2489 2031 2031 1 9606 Homo sapiens 0.011946196229700945 AITIAGIPQSIIECVK Unmodified 1711.9542 0.95424237 3930 Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DRD7;B4DLC0;F8VXH9;F8VRH0 PCBP2 Poly(rC)-binding protein 2 yes no 0 0 0 3.5 0.5 1 1 64.014 64.033 3 6.9111E-06 20065 20230619_1882_Aki_TMTPro18x_K_F3 108.71 90.575 144690 98985 115640 137610 135690 181710 171260 89529 178270 184890 187580 180050 205660 142200 78793 253360 198660 205620 133430 90999 120400 136220 140600 178200 170590 100650 181640 181730 192550 181850 203190 153890 89950 249570 188960 195780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 535030000 1357 3930 1297 2490;2491 2032 2032 1 9606 Homo sapiens 0.12674341491174346 AITIAGR Unmodified 700.42317 0.42317345 3880;2441 B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 no no 0 0 0 1.5 0.5 1 1 39.835 39.87 2 0.0074767 10025 20230619_1880_Aki_TMTPro18x_K_F1 124.89 90.7 621310 480890 593930 550990 464300 487730 447120 425850 547110 770380 947610 944670 869760 736300 721880 737500 1074500 945190 574110 440980 603170 550120 492150 496960 455670 448910 568220 765000 949660 943520 883220 766680 756100 752750 1023700 896020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 691400000 1358 2441;3880 1298 2492;2493 2033 2033 1 9606 Homo sapiens 0.060978788713782706 AITIAGVPQSVTECVK Unmodified 1671.8866 0.88655673 3929 Q15365;Q53SS8 PCBP1 Poly(rC)-binding protein 1 yes no 0 0 0 4.5 3.04 1 1 1 1 58.253 58.281 3 2.3199E-14 17094 20230619_1888_Aki_TMTPro18x_K_F8 170.11 141.14 181600 160560 192690 191780 172460 215610 196380 192160 217310 228390 193870 191930 249500 196170 179780 241100 225260 239670 168090 147220 194540 191450 181550 215640 197320 198900 219480 227800 202380 196660 249500 204720 186890 241290 215180 227600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 11125000000 1359 3929 1299 2494;2495;2496;2497 2034;2035;2036 2036 3 9606 Homo sapiens 0.0774889156032259 AITIANQTNCPLYITK Unmodified 1819.9502 0.95021962 1284;4185 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q86U75 DPYSL2 Dihydropyrimidinase-related protein 2 no no 0 0 0 3.5 0.5 1 1 58.371 58.388 3 2.2841E-14 17751 20230619_1882_Aki_TMTPro18x_K_F3 170.49 142.52 414580 362870 382470 396280 291480 334590 402530 383670 362640 501360 464220 476290 521270 451290 455990 531480 518880 513000 383270 332460 389930 396900 312930 344310 398410 391840 376390 499290 474130 483720 527150 470560 468710 531580 495820 487470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6754499999.999999 1360 1284;4185 1300 2498;2499 2037;2038 2037 2 9606 Homo sapiens 0.07304251997425126 AITIASQTNCPLYVTK Unmodified 1778.9237 0.92367052 1217 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 3.5 0.5 1 1 56.982 57.001 3 1.6225E-12 17183 20230619_1882_Aki_TMTPro18x_K_F3 169.37 142.03 112180 98781 119050 132930 110960 125030 113930 113590 116740 139430 104440 96512 128820 97137 105650 147580 112230 107030 103830 90688 120310 131300 115960 126760 114840 117550 118510 138200 108740 99997 129520 102880 108430 145100 107280 102100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 334560000 1361 1217 1301 2500;2501 2039;2040 2039 2 9606 Homo sapiens 0.06536563106101312 AITPQAQEELQK Unmodified 1354.7092 0.70924429 3790 Q02952-3;Q02952-2;Q02952 AKAP12 A-kinase anchor protein 12 yes no 0 0 0 4.5 0.5 1 1 46.757 46.817 3 6.1243E-07 12509 20230619_1883_Aki_TMTPro18x_K_F4 147.26 120.59 323930 230920 266510 290970 271640 293520 283010 272360 326100 352510 418240 422660 407000 347180 390260 460110 411860 416070 298850 212030 275690 288930 282210 296180 286150 281970 333480 354050 424320 423480 414910 366440 398730 457900 393880 395640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288750000 1362 3790 1302 2502;2503 2041 2041 1 9606 Homo sapiens 0.046078040724978564 AITSGGITYQDQPWHADCFVCVTCSK Unmodified 3000.3204 0.32044758 3865 Q13642-4;Q13642-5;Q13642-1;Q53FI7;B7Z4B7;B7Z5V0;B7Z9A1;B7Z5T3;B7Z6U8;B3KRI9;Q5JXI8;Q13642;A0A494C0D6;Q5JXI3;Q5JXH8;Q5JXH7 FHL1 Four and a half LIM domains protein 1 yes no 0 0 0 8 0 1 59.405 59.446 4 1.4014E-05 17553 20230619_1888_Aki_TMTPro18x_K_F8 89.979 83.475 30898 24623 30484 32307 21705 22010 26289 28945 31562 35882 33845 34722 37538 34328 27051 45103 38713 46414 28562 22607 30872 31869 23355 23205 26434 29283 31974 35844 34771 35302 37724 35988 28439 45165 36981 44042 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49545000 1363 3865 1303 2504 2042 2042 1 9606 Homo sapiens -0.09969983038536157 AITTSLTTK Unmodified 934.53351 0.53351176 2154 A8KAK1;Q9NYU2-2;Q9NYU2;F8WCI2;F8WCE6 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 2 0 1 47.174 47.249 3 3.8341E-05 13178 20230619_1881_Aki_TMTPro18x_K_F2 149.82 124.92 71845 60961 62845 72173 81917 89488 91465 75430 96151 84402 109900 106450 93220 79508 97727 101790 104560 105290 66380 55900 64948 72179 83835 88866 91758 78325 98143 85514 111370 106190 95883 84065 99699 102110 99983 99966 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52623000 1364 2154 1304 2505 2043 2043 1 9606 Homo sapiens 0.06362634349079599 AIVAGDQNVEYK Unmodified 1305.6565 0.65648044 3865 Q13642-4;Q13642-5;Q13642-1;Q53FI7;B7Z4B7;B7Z5V0;B7Z5T3;B7Z6U8;Q5JXI8;Q13642;A0A494C0D6;Q5JXI3;Q5JXH8;Q5JXH7;Q5JXI2;A0A0D9SFZ9;Q5JXH9;A0A0D9SFB0;A0A0D9SFI6;Q13642-3;Q5JXI0;A0A0D9SGB2 FHL1 Four and a half LIM domains protein 1 yes no 0 0 0 4.5 0.5 1 1 47.541 47.599 3 4.6192E-07 12869 20230619_1883_Aki_TMTPro18x_K_F4 152.85 110.11 346640 240620 263680 301000 281220 283690 308080 301050 364810 387900 408280 465750 436690 380040 368710 492500 480790 471320 319590 220940 275200 298800 291510 288690 310860 308790 370320 389650 418420 466290 441720 400650 383000 491560 458870 447920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 491750000 1365 3865 1305 2506;2507 2044;2045 2045 2 9606 Homo sapiens 0.015878460097155767 AIVAIENPADVSVISSR Unmodified 1739.9418 0.94176342 205 C9J9K3;A0A8V8TMX1;A0A024R2L6;A0A0C4DG17;A0A8V8TLA4;P08865;A0A8I5KQE6;Q96RS2;A0A024R7P5;F8WD59 RPSA;LOC388524 40S ribosomal protein SA yes no 0 0 0 6.8 0.748 2 2 1 59.656 59.706 2;3 1.1264E-47 17632 20230619_1887_Aki_TMTPro18x_K_F7 331.7 279.85 541480 487810 551540 590070 521460 494640 630060 547950 565170 690780 750480 750000 800760 652000 654620 840050 802340 982180 501090 447310 559160 586400 545920 509020 627090 560380 587310 691930 763420 755600 808550 686120 677480 848410 767490 930720 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1605799999.9999998 1366 205 1306 2508;2509;2510;2511;2512 2046;2047;2048 2048 3 9606 Homo sapiens 0.10139021352438249 AIVDAAR Unmodified 714.40244 0.40243801 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 4 0.816 1 1 1 36.537 36.601 2 0.0035745 8130 20230619_1883_Aki_TMTPro18x_K_F4 154.09 69.736 428980 228900 465170 508880 595360 630910 543740 560700 589670 490660 637720 638770 640370 517330 563250 348790 740100 644010 396080 212120 471730 491880 606400 626600 552780 575790 599660 504270 652120 637190 649710 529260 582560 370500 705750 608900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 322120000 1367 3152 1307 2513;2514;2515 2049;2050 2049 2 9606 Homo sapiens 0.03381288491709711 AIVDALPPPCESACTVPTDVDK Unmodified 2354.1134 0.11339814 3922 Q15181;V9HWB5 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 0 0 4.14 1.46 1 2 1 1 2 59.024 59.061 3;4 1.0559E-06 18027 20230619_1882_Aki_TMTPro18x_K_F3 96.79 87.26 285530 257200 291660 288310 218760 276290 263630 265420 286560 328770 302960 304810 353560 287520 300630 392190 330840 333480 264240 235680 294660 288580 234460 280080 264130 273650 291590 328080 312280 310040 356640 302690 308810 388880 316270 317360 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 1113400000 1368 3922 1308 2516;2517;2518;2519;2520;2521;2522 2051;2052;2053;2054;2055;2056;2057 2051 7 9606 Homo sapiens -0.009494025243839133 AIVDCIISIIEENSESK Unmodified 1918.9558 0.95575851 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 7 0 1 68.472 68.492 3 2.6269E-13 21505 20230619_1887_Aki_TMTPro18x_K_F7 145.86 135.07 6347.6 4522.4 5512.1 6651.8 6063.5 6005.5 6944.6 6372.8 5705.6 6136.9 6253 7502.3 7250.9 6280.8 4704.6 6595.6 6382.4 7982.4 5858.3 4159.5 5683.7 6531.2 6270.2 6130.1 6912.6 6483.5 5908.6 6253.4 6440.2 7508 7249 6536.6 4932.3 6695 6101.5 7561.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3785400 1369 4753 1309 2523 2058 2058 1 9606 Homo sapiens 0.03303885998639089 AIVDCIISIVEENPESK Unmodified 1914.9608 0.96084389 1219 A0A140VK12;Q9UBF2;Q9H9B7;Q9UBF2-2;B3KND4;Q9NUP3 COPG2 Coatomer subunit gamma-2;Coatomer subunit gamma yes no 0 0 0 6 0 1 66.525 66.568 3 0.00035639 20993 20230619_1886_Aki_TMTPro18x_K_F6 75.018 64.877 5568.2 4878.4 5185.5 4723.9 4270 3835.4 4773.7 5346.7 3808.7 4791.5 4580.5 6521.3 5541.3 5508.1 5453.7 4289 6057.8 6233.3 5148.1 4465 5281 4778.9 4512.1 3986.2 4760.2 5343.2 3972 4919.1 4721.1 6497.1 5626.3 5648.8 5573.7 4443.4 5791.4 5899.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3123200 1370 1219 1310 2524 2059 2059 1 9606 Homo sapiens 0.039961898612546065 AIVDLTGL Unmodified 800.46437 0.46436956 516 B4DGI3;A0A024R8H5;Q12933-4;Q12933-3;Q12933;Q12933-2;E5KBQ3 TRAF2 TNF receptor-associated factor 2 yes no 0 0 0 4.5 0.5 1 1 64.777 64.804 2 0.002743 20090 20230619_1885_Aki_TMTPro18x_K_F5 121.87 75.521 28222 24423 24251 27250 18802 25110 29189 27775 30867 31250 27619 30113 31907 25397 25009 36709 32835 31932 26075 22381 24910 27270 20280 25612 28878 28292 31231 31355 28690 30463 32099 26953 26048 36403 31334 30383 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72517000 1371 516 1311 2525;2526 2060 2060 1 9606 Homo sapiens 0.056155951201731114 AIVDSPCIYEAEQK Unmodified 1621.7658 0.76577289 1604 A0A6I8PRJ0;A0A6I8PLG0;A0A6I8PRQ0;A0A6I8PUE4;H0Y5C0;B1ALU1;A0A8I5KUX3;A0A6I8PIV6;A0A6I8PRM6;B1ALU3;A0A6I8PTT2;O95490-3;O95490-7;O95490-5;O95490;O95490-2;O95490-4;O95490-6 ADGRL2;LPHN2 Latrophilin-2 yes no 0 0 0 4 0 1 53.64 53.659 3 5.4056E-05 15676 20230619_1883_Aki_TMTPro18x_K_F4 98 84.881 44284 34214 46382 45584 43748 55326 53336 45330 56300 57707 56545 65230 66904 55353 53820 70879 68708 77066 40950 31423 46911 45220 45949 54955 53303 47357 57223 57895 58511 65526 67337 58259 55876 71266 65653 73101 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38842000 1372 1604 1312 2527 2061 2061 1 9606 Homo sapiens -0.020239361531139366 AIVEFLSNLAR Unmodified 1231.6925 0.69247202 2251 B2R7X3;Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes no 0 0 0 5.5 0.5 1 1 65.838 65.881 3 0.003039 20703 20230619_1886_Aki_TMTPro18x_K_F6 72.582 41.21 5038.2 3314.6 2661.3 3007.3 4413 3892.3 5261.3 3640.2 4957.1 5071.4 4631.4 3157.8 5428.6 4017.7 3298.7 3331.7 3864.3 3523.6 4634.8 3035.8 2929.7 3076.5 4464.2 3868.5 5238.5 3776.5 5057.3 4992.8 4789.8 3322.4 5409.1 4085.4 3422.8 3370.9 3689.5 3346 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7443800 1373 2251 1313 2528;2529 2062 2062 1 9606 Homo sapiens 0.0858934797722668 AIVICPTDEDLK Unmodified 1372.6908 0.69081704 95 Q9BUJ2;A0A0A0MRA5;Q9BUJ2-2;Q9BUJ2-4;A8K6U7;A8K3W4;B7Z4B8;A0A024R0J9;Q9BUJ2-3;A8K5K0;M0R3F1;B3KM60 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 4.5 0.5 1 1 55.715 55.751 3 9.6976E-05 16526 20230619_1883_Aki_TMTPro18x_K_F4 111.52 82.184 156140 135250 156770 169770 143910 189320 164680 159850 198780 177450 166500 168060 198930 138790 167660 214020 185310 191590 144440 124080 159120 168840 151340 189210 165900 165840 199300 178180 173770 170120 200340 148230 172270 212450 177170 182190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 242590000 1374 95 1314 2530;2531 2063;2064 2063 2 9606 Homo sapiens 0.019379261063022568 AIVPLEAR Unmodified 867.5178 0.51780212 1699 A0A7P0T8N8;O14776-2;O14776;G3V220 TCERG1 Transcription elongation regulator 1 yes no 0 0 0 6 0.816 1 1 1 46.526 46.608 2 0.02008 12389 20230619_1886_Aki_TMTPro18x_K_F6 88.942 53.062 259920 194730 221660 244060 236810 272890 248360 250620 296350 263620 260330 259440 273370 243180 259200 299870 291550 279880 239920 178750 228710 242770 245350 273220 251240 257920 297730 265710 269380 263100 278040 254320 265820 299210 278560 266090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 337010000 1375 1699 1315 2532;2533;2534 2065 2065 1 9606 Homo sapiens 0.07874392622716186 AIVQLVNER Unmodified 1040.5978 0.59784335 99 A0A024R0L6;Q15102;M0R389 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma yes no 0 0 0 7.5 0.5 1 1 50.715 50.794 2 0.00065441 13920 20230619_1887_Aki_TMTPro18x_K_F7 128.12 65.921 768230 574170 622390 630470 624450 736820 715580 657170 787210 533490 530220 513240 508760 449730 700570 573180 573960 489270 708860 526390 644510 633710 651690 735210 718200 673770 786890 545720 555560 520090 529190 472340 701290 569800 549800 465910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 810210000 1376 99 1316 2535;2536 2066;2067 2066 2 9606 Homo sapiens 0.07916834225898128 AIVTEPK Unmodified 756.43815 0.43815481 1675 H7BYN4;A0A7I2V5Y5;Q02241-2;Q02241;Q02241-3 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 0 0 0 5 0 2 42.351 42.433 2 0.0050737 10541 20230619_1885_Aki_TMTPro18x_K_F5 119.89 33.775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1377 1675 1317 2537;2538 2068;2069 2069 2 9606 Homo sapiens 0.05019325948705955 AIVWGMQTR Unmodified 1060.5488 0.54878467 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 4.5 0.5 1 1 52.357 52.406 2 0.00024202 14794 20230619_1885_Aki_TMTPro18x_K_F5 142.79 112.98 546020 508200 541440 462100 369270 505620 460750 447790 521780 365580 313890 246610 312980 253290 443680 361320 344520 261040 505290 464820 547360 471650 400500 506810 461370 459330 519400 370630 331690 256370 325610 266800 442910 356050 330010 249310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 303250000 1378 161 1318 2539;2540 2070;2071 2071 2 9606 Homo sapiens 0.02093222665303074 AIWAALQTQTSNAAK Unmodified 1572.826 0.82600539 2154 A8KAK1;Q9NYU2-2;Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 4.5 0.5 1 1 60.788 60.815 3 0.064492 18183 20230619_1885_Aki_TMTPro18x_K_F5 40.941 22.577 30394 26353 31543 29479 26701 31146 34267 33967 36399 30811 32846 32141 28531 25914 37806 30216 32735 36649 28124 24150 31866 29558 28326 31435 34185 34422 36792 31349 33697 32360 29704 27168 37960 30679 31397 34727 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128350000 1379 2154 1319 2541;2542 2072 2072 1 9606 Homo sapiens 0.06250542292286809 AIYAALSGNLK Unmodified 1119.6288 0.62880913 3671 P57740;P57740-2;B3KMK0;P57740-3;H0YG15 NUP107 Nuclear pore complex protein Nup107 yes no 0 0 0 4.5 0.5 1 1 60.736 60.762 3 8.2016E-05 18217 20230619_1885_Aki_TMTPro18x_K_F5 121.41 74.11 50999 48911 49703 52278 56202 65197 62702 53076 60074 35403 30637 24698 29574 21781 40371 27583 30624 24176 47198 44789 50722 52698 58043 64676 62719 54615 60111 36455 32770 25484 30712 22893 40250 27479 29350 23022 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19389000 1380 3671 1320 2543;2544 2073 2073 1 9606 Homo sapiens 0.07377987540121467 AIYDIVHR Unmodified 985.53451 0.53451481 2442 B3KY37;B7Z765;Q9UL01 DSE Dermatan-sulfate epimerase yes no 0 0 0 8 0 1 45.294 45.323 3 0.00036657 11611 20230619_1888_Aki_TMTPro18x_K_F8 113.71 62.361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1381 2442 1321 2545 2074 2074 1 9606 Homo sapiens 0.041168935086489 AIYDIYGK Unmodified 941.48583 0.48583328 2566 B4DPK2;Q9NVH1-3;Q9NVH1;Q9NVH1-2;Q9UMU8;B1AK20;Q5TH61;A0A8I5KXQ7 DNAJC11 DnaJ homolog subfamily C member 11 yes no 0 0 0 7.5 0.5 1 1 54.646 54.712 2 0.0049663 15696 20230619_1887_Aki_TMTPro18x_K_F7 124.08 68.069 60057 50837 62689 69285 60222 75682 67418 67097 80272 69698 66475 67785 72201 56287 72308 77174 73337 71754 55566 46685 63477 68513 63021 75810 67961 69220 80490 70266 69127 68523 73486 59564 73608 76901 70148 68216 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 273730000 1382 2566 1322 2546;2547 2075 2075 1 9606 Homo sapiens 0.012749801488894263 AIYDTPCIQAESEK Unmodified 1623.745 0.74503745 1088 A0A0S2Z489;O00232-2;O00232;A0A0S2Z476 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 3.5 0.5 1 1 51.186 51.235 3 7.0297E-06 14707 20230619_1882_Aki_TMTPro18x_K_F3 118.76 107.5 144720 120830 140650 148260 149390 154440 138670 144580 194560 168720 160320 138570 172860 138360 141310 198490 195380 169640 133810 110840 143360 147560 154230 155530 142200 149010 193690 168400 166450 142200 174550 145940 147540 196700 186230 161520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 462630000 1383 1088 1323 2548;2549 2076 2076 1 9606 Homo sapiens -0.0418852653281192 AIYELAISQPR Unmodified 1259.6874 0.68738664 4045 Q8IXG0;Q69YP1;Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 crn;DKFZp762M013;CRNKL1 Crooked neck-like protein 1 yes no 0 0 0 1 0 1 56.035 56.035 3 0.0018322 16900 20230619_1880_Aki_TMTPro18x_K_F1 70.488 51.713 30548 23886 28781 26701 30534 33955 28568 30703 27495 32318 33199 30116 32655 24827 33049 32054 32149 33674 28225 21898 29394 26843 31525 33716 28911 31619 28328 32493 33757 30505 33338 26187 33545 32188 30780 31961 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52101000 1384 4045 1324 2550 2077 2077 1 9606 Homo sapiens 0.06793044114601798 AIYSFCSQICDPR Unmodified 1615.7123 0.71229754 4090 Q68CN2;Q71SV8;Q9HCS7 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 yes no 0 0 0 1 0 1 55.116 55.116 3 3.9949E-06 16447 20230619_1880_Aki_TMTPro18x_K_F1 130.1 119.19 55842 51138 59167 59450 57736 66764 70284 63756 72479 67013 65644 60662 64841 53732 62808 72912 67248 60191 51700 46872 59820 59468 60420 66890 70193 65441 73433 67369 67615 61671 66104 56661 64203 72224 64251 57330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51740000 1385 4090 1325 2551 2078;2079 2078 2 9606 Homo sapiens -0.07093012136624566 AKADAECYTAMK Unmodified 1357.6006 0.60062182 1421 E5RHW4;A0A384ME54;O94905 ERLIN2 Erlin-2 yes no 0 0 1 7 0 1 44.187 44.27 3 2.8581E-05 11030 20230619_1887_Aki_TMTPro18x_K_F7 123.02 99.783 207480 185660 240860 210370 263470 304240 298750 283610 277560 246940 296270 257890 242350 223840 300370 187960 254040 171280 192220 170140 242120 211770 272710 300020 298530 290110 284500 251890 300630 260170 251840 230000 301200 188990 242930 163160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55179000 1386 1421 1326 2552 2080;2081 2081 2 9606 Homo sapiens -0.06387446493795323 AKDDATLSGK Unmodified 1004.5138 0.51383895 3851 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 1 5.5 0.5 1 1 38.988 39.075 3 0.0014816 9146 20230619_1886_Aki_TMTPro18x_K_F6 92.925 44.184 83322 36998 108300 108870 178320 159950 129000 166540 119820 84018 145190 168280 99471 113750 151610 58832 144560 125550 77016 34524 108950 104580 177950 157920 132770 167350 123420 91843 146040 165020 105620 116120 152330 64075 138250 118610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108380000 1387 3851 1327 2553;2554 2082 2082 1 9606 Homo sapiens 0.01176258338352909 AKDDDDSDIPTAQR Unmodified 1545.6907 0.6906937 3273 O60271;O60271-4;O60271-2;O60271-3;O60271-5;O60271-9;B4DS36 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 1 2 0 1 36.984 37.045 3 0.001048 8506 20230619_1881_Aki_TMTPro18x_K_F2 90.689 80.349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1388 3273 1328 2555 2083 2083 1 9606 Homo sapiens -0.06032402360006017 AKDDSELEGQVISCLK Unmodified 1790.872 0.87202888 4310 Q92896;Q92896-3;Q92896-2;Q6ZMF1 GLG1 Golgi apparatus protein 1 yes no 0 0 1 5.5 0.5 1 1 55.61 55.68 3 0.0072213 16134 20230619_1885_Aki_TMTPro18x_K_F5 68.187 52.064 42374 30736 34703 51446 57969 68387 66462 70838 71216 66189 58698 63746 75549 61112 59937 72617 63953 81664 39096 28314 36369 50419 58644 67866 66622 72030 71813 67070 61582 64734 75813 63773 61520 73253 61274 77404 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40078000 1389 4310 1329 2556;2557 2084 2084 1 9606 Homo sapiens 0.008227746215425213 AKDEQSAVSMLK Unmodified 1305.6599 0.65985126 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 1 7.5 0.5 1 1 47.479 47.552 3 0.0024866 12435 20230619_1887_Aki_TMTPro18x_K_F7 79.337 37.128 333040 253380 317310 321120 340630 388350 434560 437480 446130 449800 445190 404470 541460 371030 462140 449000 433840 395240 307700 232600 324130 319710 354510 388630 433010 443660 453950 452440 460760 411700 545070 388340 469670 447050 415100 376110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 510320000 1390 2337;3778;3779 1330 2558;2559 2085 2085 1 9606 Homo sapiens 0.019247727920628677 AKEEELR Unmodified 873.4556 0.45559579 3807;1883 A0A994J7I5;O75525-2;O75525;E5RG12;E5RJZ9;H0YAQ3;H0YAQ1;A0A6Q8PGH5;B3KTS3;Q9UBC1-2;Q9UBC1-3;Q5STV6;A0A1U9X847;A0A1U9X843;A0A0A0MRT5;Q5ST97;A8K778;Q9UBC1;Q9H6N6;Q07666;B4DDX2;B2R7B5;Q07666-2;B4E043;Q5VWX1 KHDRBS3;NFKBIL1;MYH16;KHDRBS1;KHDRBS2 KH domain-containing, RNA-binding, signal transduction-associated protein 3;NF-kappa-B inhibitor-like protein 1;Putative uncharacterized protein MYH16;KH domain-containing, RNA-binding, signal transduction-associated protein 1;KH domain-containing, RNA-binding, signal transduction-associated protein 2 no no 0 0 1 2.67 0.471 1 2 33.651 33.715 3 0.047243 7351 20230619_1882_Aki_TMTPro18x_K_F3 67.125 3.9656 274020 126810 426820 414880 702970 639030 509380 578430 408890 262780 486990 475970 335610 346430 646220 129290 396810 359600 253860 118610 424800 397640 701290 627390 522040 586400 424700 288980 489970 468960 362130 350040 634980 148090 381820 339240 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 226220000 1391 1883;3807 1331 2560;2561;2562 2086;2087;2088 2088 3 9606 Homo sapiens 0.013806214837131847 AKEEGSWK Unmodified 933.4556 0.45559579 1923 Q6LEU2;A3KLL5;P05026-2;P05026;A0A8I5KNT2 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 1 6 0 1 40.054 40.146 3 0.032034 9609 20230619_1886_Aki_TMTPro18x_K_F6 66.27 36.085 35000 21344 44305 48153 67052 71472 55389 71080 63703 43002 55892 54826 42246 38504 67074 23133 47658 37319 32383 19771 44599 46678 67496 70429 56808 71823 64039 45330 57157 54536 44724 39443 66447 24445 45715 35334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49301000 1392 1923 1332 2563 2089 2089 1 9606 Homo sapiens -0.013793785162874883 AKENDENCGPTTTVFVGNISEK Unmodified 2409.1118 0.11181823 3611 P49756;P49756-2;P49756-3;E9PQU5;E9PSE8;P49756-4 RBM25 RNA-binding protein 25 yes no 0 0 1 5 0 1 50.635 50.711 4 0.0001646 14067 20230619_1885_Aki_TMTPro18x_K_F5 73.315 59.584 18853 14341 21152 17125 23924 18825 17741 15280 15650 25269 23083 25262 21115 16107 20611 13075 18334 16587 17442 13157 21298 17097 24392 18854 18199 16130 16413 24979 23265 25284 21564 16770 20798 13415 17552 15724 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49378000 1393 3611 1333 2564 2090 2090 1 9606 Homo sapiens -0.036373202887716616 AKFEELNMDLFR Oxidation (M) 1527.7392 0.73916421 3429 V9HWB4;P11021;A0A7P0TB36 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 1 1 7 0 1 57.224 57.28 3 0.0013012 16638 20230619_1887_Aki_TMTPro18x_K_F7 91.024 71.417 216410 248620 261880 265540 389900 287830 369570 291490 237770 235260 255810 129240 163320 112090 438250 91805 85026 68592 200960 227550 264090 267220 392630 289940 369550 296200 250450 237460 257350 135670 182050 115310 419400 92456 84653 65455 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 565810000 1394 3429 1334 2565 2091 2091 2049 1 9606 Homo sapiens -0.003595802538029602 AKFEELNMDLFR Unmodified 1511.7442 0.74424959 3429 V9HWB4;P11021;A0A7P0TB36 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 1 7.5 0.5 1 1 60.913 60.95 3 4.0207E-07 18170 20230619_1888_Aki_TMTPro18x_K_F8 159 148.37 930900 1102300 1304000 1086600 1196600 1299300 1470100 1199900 1018300 1143800 962310 525710 700440 402480 2069800 280970 255090 162070 866040 1008100 1290900 1102600 1256000 1296200 1452400 1231500 1061500 1139700 978740 557390 784740 414160 1970500 283690 260970 155530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 977050000 1395 3429 1334 2566;2567 2092 2092 1 9606 Homo sapiens 0.008847236088058708 AKFENLCK Unmodified 1008.5063 0.50625115 751;4018 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 0 0 1 3.5 2.69 1 1 1 1 44.999 45.051 3 0.0078844 12266 20230619_1881_Aki_TMTPro18x_K_F2 88.496 61.397 5784500 4715800 4595300 4441800 5563100 6103600 5535500 5624700 6430300 3358300 3046800 2184400 2937500 2118200 3325000 2773900 2929100 1863000 5339500 4316400 4780500 4534200 5705000 6037200 5608200 5716400 6356900 3485700 3276100 2273200 3018600 2223300 3348900 2728400 2799000 1783100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 8420299999.999999 1396 751;4018 1335 2568;2569;2570;2571 2093;2094;2095;2096 2095 4 9606 Homo sapiens 0.0023382753706755466 AKHDELTYF Unmodified 1122.5346 0.53457439 3379 Q76LA1;P04080;A0A1W2PQG6 CSTB Cystatin-B yes no 0 0 1 5 0.816 1 1 1 46.558 46.626 3 0.0048704 12428 20230619_1883_Aki_TMTPro18x_K_F4 80.239 64.973 164770 80306 156870 169620 174000 178340 186030 178130 206850 250930 239530 233270 256440 206610 209510 278010 225790 243700 151920 74394 160330 163910 179620 179560 187540 183940 211110 249080 244870 236740 258850 217800 215160 276110 216000 231770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1123000000 1397 3379 1336 2572;2573;2574 2097 2097 1 9606 Homo sapiens -0.021791512820072967 AKHPMDTEVTK Oxidation (M) 1271.618 0.61798644 1042 O94973-2;O94973;B7Z5S9;A0A0G2JS82;B7Z1Q4;A0A8I5KY83 AP2A2 AP-2 complex subunit alpha-2 yes no 0 1 1 6 0 1 32.956 32.992 4 0.00069571 6855 20230619_1886_Aki_TMTPro18x_K_F6 116.01 76.35 21683 9995.1 26605 24135 29275 21152 21489 25133 24196 25321 29079 20310 24641 16824 30173 14172 16685 12787 20032 9285.1 26620 23160 29889 21713 22235 25397 24702 25415 29362 20735 25499 17352 29750 14266 16067 12174 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39897000 1398 1042 1337 2575 2098 2098 605 1 9606 Homo sapiens -0.00695782896491437 AKHPMDTEVTK Unmodified 1255.6231 0.62307182 1042 O94973-2;O94973;B7Z5S9;A0A0G2JS82;B7Z1Q4;A0A8I5KY83 AP2A2 AP-2 complex subunit alpha-2 yes no 0 0 1 7 0 1 36.211 36.278 4 7.0518E-07 7786 20230619_1887_Aki_TMTPro18x_K_F7 167.71 141 31495 13848 38478 36605 37238 34261 40002 37243 38460 45429 47349 36609 38056 24741 45097 24113 29216 17663 29092 12892 38469 35035 38763 34869 40143 38067 39646 45174 47698 37146 39384 25911 44737 23962 28027 16887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29934000 1399 1042 1337 2576 2099 2099 1 9606 Homo sapiens 0.0054852096614013135 AKIELLGSYDPQK Unmodified 1460.7875 0.78749461 3500 Q59EH3;P24666;P24666-3;P24666-2 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes no 0 0 1 1.67 0.471 1 2 54.339 54.355 3;4 0.0020415 16122 20230619_1880_Aki_TMTPro18x_K_F1 87.498 68.228 94575 89871 94824 96210 94667 103560 104840 92779 89701 107120 105870 92361 108400 76199 108340 90829 90819 88390 87541 82302 96312 96779 98548 103960 104670 95949 92981 107000 107920 93888 110390 79998 109110 90970 87047 83988 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71806000 1400 3500 1338 2577;2578;2579 2100;2101 2100 2 9606 Homo sapiens 0.07553236657759044 AKKPALVAK Unmodified 924.61204 0.61203685 2288;2925;271 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;H0YE58;P29692;P29692-3;E9PK01;P29692-4;E9PQZ1;E9PI39;E9PQ49;E9PL71;A0A024R3W7;P24534;A4D1M6 EEF1D;EEF1B2;LOC392793 Elongation factor 1-delta;Elongation factor 1-beta no no 0 0 2 5.5 0.5 1 1 40.279 40.37 4 0.0042979 9657 20230619_1886_Aki_TMTPro18x_K_F6 78.934 58.033 99823 85913 181270 131830 318400 239870 234460 174440 96631 37830 47087 17754 19119 12004 152510 12368 14080 13580 92956 79001 179020 130760 316130 233060 236880 179170 104250 45025 49606 18929 26589 12636 144320 12941 14806 12888 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146590000 1401 2288;2925;271 1339 2580;2581 2102 2102 1 9606 Homo sapiens 0.14671531444832908 AKLDNLDEEWATEHACQVSR Unmodified 2371.0863 0.086272185 4055 Q5SWX8;A0A024R973;Q5SWX8-3;Q5SWX8-2 ODR4;C1orf27 Protein odr-4 homolog yes no 0 0 1 4.5 0.5 1 1 49.402 49.458 4 1.11E-11 13545 20230619_1885_Aki_TMTPro18x_K_F5 142.85 131.42 27589 24551 29984 32079 26836 34614 32078 33832 31487 32947 35407 34995 36820 29303 31669 42569 35910 38551 25543 22531 30232 31808 28288 34773 32041 34591 32274 33396 36201 35267 37277 31118 32591 42305 34335 36649 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109480000 1402 4055 1340 2582;2583 2103 2103 1 9606 Homo sapiens -0.044427500205074466 AKLEEHFK Unmodified 1000.5342 0.53418046 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6;Q9BVS9 IPO5;RANBP5 Importin-5 yes no 0 0 1 7 0 1 40.685 40.753 3 0.051733 9547 20230619_1887_Aki_TMTPro18x_K_F7 58.978 38.648 98021 80879 100650 89140 99961 107490 94789 98155 116840 106200 137000 108310 104840 95245 84661 128630 129500 119100 90662 74122 101930 89643 103750 107120 96627 101110 118490 106990 137950 109580 107140 100400 89165 128060 123400 113260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97032000 1403 782 1341 2584 2104 2104 1 9606 Homo sapiens 0.03393473788810297 AKPAEAPAAAAPK Unmodified 1191.6612 0.66117189 390 A0A024R6C9;P36957;P36957-2;Q86TQ8;Q86TW7;Q86SW4;Q16187;Q6LEQ7 DLST;E2k Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes no 0 0 1 7.5 0.5 1 1 38.227 38.252 3 7.3355E-06 8772 20230619_1888_Aki_TMTPro18x_K_F8 124.45 111.31 112010 72607 149010 163970 215650 221080 183560 213460 214920 163730 232710 226990 220370 186950 202690 112750 240670 219330 103720 67236 149380 158640 217650 218880 187990 217160 217660 170110 237330 226090 224450 190370 207990 120790 229750 207270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166900000 1404 390 1342 2585;2586 2105;2106 2106 2 9606 Homo sapiens 0.07300774943087163 AKPAMPQDSVPSPR Unmodified 1479.7504 0.7503976 161 A0A024R1T9;Q4LE36;P53396 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 1 4.5 3.5 1 1 41.404 41.402 3 3.7311E-07 10024 20230619_1888_Aki_TMTPro18x_K_F8 140.27 116.43 173660 141970 164260 177160 135250 157080 164890 160890 168370 210010 212260 185250 227530 172950 194500 204010 205300 183520 160510 130270 167280 175780 143630 160460 164750 165460 173260 208770 216190 188820 229980 180550 199000 203360 196180 174600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 274070000 1405 161 1343 2587;2588 2107;2108 2108 2 9606 Homo sapiens 0.029712418403278207 AKPAMPQDSVPSPR Oxidation (M) 1495.7453 0.74531222 161 A0A024R1T9;Q4LE36;P53396 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 1 1 7.5 0.5 1 1 37.051 37.076 3 8.45E-05 8096 20230619_1887_Aki_TMTPro18x_K_F7 100.11 88.85 173210 139340 158030 165450 143620 147530 158610 158650 161420 199560 232870 206770 211330 160550 195200 206910 204270 171620 160030 127800 161600 164760 150650 150880 159280 162450 167220 199580 234430 208100 215420 169600 199330 205200 195130 163500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168860000 1406 161 1343 2589;2590 2109;2110 2109 91 2 9606 Homo sapiens 0.017269379777189897 AKPEYISK Unmodified 934.51238 0.51238239 3869 Q5T0F3;Q13823 GNL2 Nucleolar GTP-binding protein 2 yes no 0 0 1 8 0 1 41.691 41.688 3 0.065852 10185 20230619_1888_Aki_TMTPro18x_K_F8 53.751 23.181 38524 24403 46148 41854 50290 51795 49749 46343 55961 45080 64065 60085 53949 48925 55002 33819 68363 61626 35630 22502 46277 40947 51846 51478 50394 47702 56910 46105 64882 59913 55456 50059 56523 35859 65233 58263 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19353000 1407 3869 1344 2591 2111 2111 1 9606 Homo sapiens 0.042506690402206004 AKPFLSNSLGGQDDTR Unmodified 1704.8431 0.84311201 1908 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 1 8 0 1 47.219 47.267 3 8.4889E-07 12379 20230619_1888_Aki_TMTPro18x_K_F8 120.29 102.55 84238 78423 91455 95916 171200 191990 156580 147570 161170 143370 145040 130370 140340 107120 142380 151070 136800 129430 78015 71912 93577 96638 171090 185790 158750 153610 163310 144780 149300 132250 143390 113630 144490 149870 130890 123190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87407000 1408 1908 1345 2592 2112 2112 1 9606 Homo sapiens 0.01888418107387224 AKPPADPAAAASPCR Unmodified 1478.73 0.72999651 4488 Q9GZT9;Q9GZT9-2;R4SCQ0;R4SCP5 EGLN1 Egl nine homolog 1 yes no 0 0 1 8 0 1 37.329 37.315 3 5.2238E-08 8375 20230619_1888_Aki_TMTPro18x_K_F8 113.47 108.47 50411 40407 46228 47899 51222 52495 47276 41665 51359 77756 66146 60108 81817 54361 54106 99533 81735 71604 46576 37061 47381 47817 52684 52518 48038 44284 52842 76081 67780 61687 81609 58697 57281 97583 77866 68343 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20311000 1409 4488 1346 2593 2113;2114 2114 2 9606 Homo sapiens 0.009780711804978637 AKPPQESPSSASALAEWASIR Unmodified 2182.1018 0.10184589 2333 B4DYK9;B7ZMH1;B2RWN6;A0A024RD92 KIAA1211;hCG_39854 yes no 0 0 1 1 0 1 55.229 55.229 3 4.4291E-12 16523 20230619_1880_Aki_TMTPro18x_K_F1 142.04 138.43 27949 24729 29007 27929 25027 27319 25136 19380 22773 33125 31272 35874 35042 31432 36035 32849 35530 38881 25865 22663 29305 27940 26299 27506 25280 20746 23729 32816 31895 36107 35697 32647 36580 33338 34023 36853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27810000 1410 2333 1347 2594 2115 2115 1 9606 Homo sapiens 0.05807904558878363 AKPTSDKPGSPYR Unmodified 1402.7205 0.72047768 2485 B4DH39;Q8TAF6;O60488-2;O60488;A0A804HI36;D6RDA8;D6RF95 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes no 0 0 2 2.5 0.5 1 1 35.439 35.496 4 0.0089675 7756 20230619_1882_Aki_TMTPro18x_K_F3 70.26 33.413 288750 236660 299470 287980 205580 209240 233250 220600 260090 284950 290670 225980 293770 235150 244500 329340 328140 210150 267080 217100 301740 285700 221560 217970 234660 226490 264790 282730 296430 232750 297360 247160 254540 322560 312340 201300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 125030000 1411 2485 1348 2595;2596 2116;2117 2116 2 9606 Homo sapiens 0.035226261666366554 AKPVATAPIPGTPWCVVWTGDER Unmodified 2507.2631 0.26311434 1699 A0A7P0T8N8;O14776-2;O14776;G3V220;B7Z921 TCERG1 Transcription elongation regulator 1 yes no 0 0 1 3 0 1 61.593 61.622 4 2.3798E-14 19084 20230619_1882_Aki_TMTPro18x_K_F3 145.13 135.85 24091 21064 24262 25892 18766 21245 30003 29532 22728 26381 26931 27114 28757 26342 26916 27689 30021 32066 22287 19320 24565 25704 20205 22025 29384 29519 23743 26830 27524 27470 29216 27270 27578 28048 28708 30402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121740000 1412 1699 1349 2597 2118 2118 1 9606 Homo sapiens 0.06977330600420828 AKPVLEDLR Unmodified 1039.6026 0.60259438 2781 CON__P15497 yes yes 0 0 1 6.5 0.5 1 1 45.392 45.478 3 0.0066046 11483 20230619_1887_Aki_TMTPro18x_K_F7 65.5 38.171 + 179920 440860 440540 207140 760510 1060700 621180 646400 1003900 520200 788380 893190 421160 506430 888130 474880 623280 638320 170440 400950 429710 240360 762670 998180 645760 684620 990190 544960 804240 876070 464540 532640 878030 488310 599010 604490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 783130000 1413 2781 1350 2598;2599 2119;2120 2119 2 0.08437718368645619 AKPVNSKPDSAYR Unmodified 1431.747 0.74702678 284 B3KN05;A0A7P0TA76;B2RBE0;A0A024R487;O95573;A0A7P0TBB1;A0A7P0TB52;A0A7P0T905;H7BYZ7;A0A7P0TBL9;C9JC11 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes no 0 0 2 3 0 1 35.285 35.342 4 8.2685E-06 7695 20230619_1882_Aki_TMTPro18x_K_F3 127.3 106.46 185800 131400 182760 189920 170290 179440 176860 183500 226980 217240 228470 202670 253110 191110 178020 216790 257220 193100 171630 120830 185730 186820 178070 182320 179590 188090 228480 217340 235120 206090 253870 198970 186890 216030 244900 183900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154240000 1414 284 1351 2600 2121 2121 1 9606 Homo sapiens 0.04842315057999258 AKPVPWVEK Unmodified 1052.6019 0.6018661 3545 P35249;C9JZI1;P35249-2;C9J8M3;C9JXZ7;C9JW34;C9JGY5;F8WE44 RFC4 Replication factor C subunit 4 yes no 0 0 1 2 0 1 48.696 48.762 3 0.0043086 13855 20230619_1881_Aki_TMTPro18x_K_F2 83.862 46.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1415 3545 1352 2601 2122 2122 1 9606 Homo sapiens 0.07766923719600527 AKPYEGSILEADCDILIPAASEK Unmodified 2489.236 0.23595611 2542 P00367;E9KL48;B4DMF5;B4DMG8;B4E0N9;P00367-3;A0A804HJD7;B3KT18;P00367-2;Q59FQ4;Q14400 GLUD1 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase yes no 0 0 1 6 0 2 61.438 61.493 3;5 3.2287E-19 18764 20230619_1886_Aki_TMTPro18x_K_F6 153.77 138.01 95175 79575 96504 96027 91229 110910 106870 105030 104340 104760 115020 118680 119870 101460 128860 134280 118650 137440 88027 72986 97857 95840 95642 110870 106810 107710 106870 106300 117790 119320 122590 106960 130350 134570 113750 130440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 232850000 1416 2542 1353 2602;2603 2123;2124 2124 2 9606 Homo sapiens 0.050907574787743215 AKQEPEVNGGSGDAVPSGNEVSENMEEEAENQAESR Unmodified 3773.6195 0.61946219 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;P49321-2;Q5T626;Q5T624;Q9P1N1;H0YF33 NASP Nuclear autoantigenic sperm protein yes no 0 0 1 1 0 1 49.97 49.97 4 5.1011000000000005E-25 14361 20230619_1880_Aki_TMTPro18x_K_F1 165.04 163.64 7095.5 5846.1 5973.9 6286.5 7119.7 7825.5 8677.9 5285.3 4867.3 8113.6 6924.9 7654 11133 6678.7 6341.5 7862.3 7645 8328 6552.8 5356.6 6182.6 6332.7 7337.7 7741.8 8534.9 5660.7 5276.8 8030.5 7195.4 7751.6 10980 6999 6612.7 7903.5 7306.8 7902.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26227000 1417 3605 1354 2604 2125 2125 1 9606 Homo sapiens -0.15640276710519174 AKVDEFPLCGHMVSDEYEQLSSEALEAAR Oxidation (M) 3296.4966 0.49655727 3513 X1WI28;X5D2T3;P27635;B8A6G2;X5D2W5;A6QRI9 RPL10 60S ribosomal protein L10 yes no 0 1 1 5 0 1 61 61.05 4 9.448900000000001E-30 18354 20230619_1885_Aki_TMTPro18x_K_F5 193.23 188.17 76332 67455 76278 79580 74250 82426 86940 88588 78379 87114 44531 52177 88273 62354 49000 99362 79528 88805 70617 61844 77485 79435 77586 83283 86663 90009 79172 87033 49232 54918 86806 66029 52481 98490 75861 84426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 372550000 1418 3513 1355 2605 2126 2126 2179 1 9606 Homo sapiens -0.059831151141679584 AKYESDMVTGGYAALINLCCR Oxidation (M) 2407.097 0.097036567 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 1 1 2 0 1 57.689 57.704 3 2.1182999999999997E-22 17659 20230619_1881_Aki_TMTPro18x_K_F2 176.46 175.92 98283 79072 84609 102210 82844 79779 80546 84263 87241 106670 95826 114250 114420 106090 89873 145460 121050 134840 90765 72586 87131 101010 86077 82523 81615 86419 88992 106790 98837 115370 115120 111720 93858 144760 115620 128130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 145120000 1419 1723 1356 2606 2127;2128 2127 1125 2 9606 Homo sapiens -0.05022806962051618 AKYPDYEVTWANDGY Unmodified 1790.7788 0.77878042 4588 V9HWC4;Q9NRX4;Q6FIE5 HEL-S-132P;PHPT1;PHP14 14 kDa phosphohistidine phosphatase yes no 0 0 1 5.5 0.5 1 1 58.817 58.877 3 0.013155 17428 20230619_1885_Aki_TMTPro18x_K_F5 65.038 60.589 94977 94564 102400 101850 85120 87105 95113 104810 83780 118640 120310 109460 104850 93936 139400 91973 96060 90732 87998 86591 103120 102140 89928 89675 95096 106200 87580 118770 121060 110970 109100 97293 138480 92567 92292 86210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 173430000 1420 4588 1357 2607;2608 2129;2130 2129 2 9606 Homo sapiens -0.08497781769369794 ALAAAGYDVEK Unmodified 1106.5608 0.56078914 1927;3462;3463 Q4VB24;A3R0T8;P10412;A3R0T7;B2R984;Q02539;A1L407;P22492;P16402;P16403 HIST1H1E;HIST1H1A;HIST1H1T;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.1;Histone H1t;Histone H1.3;Histone H1.2 no no 0 0 0 4.5 2.36 2 1 1 2 2 1 1 2 50.125 50.18 2;3 5.7511E-09 14003 20230619_1883_Aki_TMTPro18x_K_F4 172.27 117.21 12437000 10341000 10732000 11442000 9738900 9925000 11538000 11680000 11386000 13604000 14155000 14032000 14122000 12454000 13470000 14585000 16552000 14950000 11489000 9477000 11031000 11451000 10238000 10199000 11531000 11864000 11727000 13651000 14392000 14173000 14388000 13010000 13884000 14640000 15796000 14202000 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 99746000000 1421 1927;3462;3463 1358 2609;2610;2611;2612;2613;2614;2615;2616;2617;2618;2619;2620 2131;2132;2133;2134;2135;2136 2133 6 9606 Homo sapiens 0.011771178894605328 ALAAFLK Unmodified 732.45341 0.45341094 2186 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QYF7;M0R140 RPS19 40S ribosomal protein S19 yes no 0 0 0 4.5 0.5 1 1 60.71 60.736 2 0.0054462 18594 20230619_1883_Aki_TMTPro18x_K_F4 140.79 59.118 806920 750480 668140 643730 851860 1212900 558710 876430 1180100 123330 79358 70746 84499 69847 369090 113460 116950 68026 745720 686130 692920 666790 866490 1175100 599660 897160 1120100 165710 133760 74905 99972 74372 354960 111600 113990 65272 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1529799999.9999998 1422 2186 1359 2621;2622 2137;2138 2137 2 9606 Homo sapiens 0.0764823753655719 ALAAGGVGSIVR Unmodified 1069.6244 0.62439245 3245 O15511;O15511-2 ARPC5 Actin-related protein 2/3 complex subunit 5 yes no 0 0 0 3 0 1 48.17 48.249 2 1.8086E-17 13354 20230619_1882_Aki_TMTPro18x_K_F3 228.41 120.33 427910 337700 334780 414160 486670 573160 428730 437090 531460 284080 254030 196800 229140 203910 350520 262860 261440 219670 394880 309860 350620 413820 492640 564230 438550 451750 523950 293280 272490 204350 240560 213210 348880 261090 250710 209260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182910000 1423 3245 1360 2623 2139 2139 1 9606 Homo sapiens 0.09236523117237994 ALAAGGYDVEK Unmodified 1092.5451 0.54513908 3461 P16401 HIST1H1B Histone H1.5 yes yes 0 0 0 5.15 2.03 1 2 2 2 2 2 2 48.299 48.365 2;3 7.6625E-07 12836 20230619_1887_Aki_TMTPro18x_K_F7 193.82 165.65 1595600 1251500 1376200 1418300 1514100 1535100 1580900 1566800 1798100 1613900 1880700 1802300 1972800 1661400 1374800 2190900 1702200 1819000 1473400 1147500 1418400 1420700 1563200 1544900 1597000 1599800 1822200 1634600 1928300 1818000 1982100 1745700 1431200 2170000 1626300 1731200 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 46359000000 1424 3461 1361 2624;2625;2626;2627;2628;2629;2630;2631;2632;2633;2634;2635;2636 2140;2141;2142;2143;2144;2145;2146 2145 7 9606 Homo sapiens 0.002568313724168547 ALAAHPWK Unmodified 892.49192 0.49192172 1084 A0A0S2Z466;F8WEL3;B5MC10;A8MTD3;G5E9F5;A0A0S2Z469;B5MC53;B5MCF8;A0A0S2Z3Z9;E7EX18;P39210 MPV17 Protein Mpv17 yes no 0 0 0 3 0 1 43.322 43.392 3 0.0011115 11086 20230619_1882_Aki_TMTPro18x_K_F3 117.93 75.955 182380 169150 187890 190380 246300 300370 274000 265860 326340 97123 117250 92374 75946 62645 210510 93246 113310 72687 168830 154990 191400 191990 252200 294470 276010 269400 320310 107480 128440 93235 85232 67193 205670 92447 109070 69406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112760000 1425 1084 1362 2637 2147 2147 1 9606 Homo sapiens 0.041375431710775956 ALADDDFLTVTGK Unmodified 1364.6824 0.68236084 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57;A0A3B3ITP6;A4FS09 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 4.25 0.829 1 1 2 61.265 61.298 2;3 1.7315E-10 18459 20230619_1885_Aki_TMTPro18x_K_F5 180.88 149.81 247040 168880 231730 243250 200020 194460 213340 213570 258370 264810 265780 279420 300640 289290 259390 288750 279360 294450 228080 155320 236190 238890 210520 200820 215860 218350 261080 265360 273940 283270 303990 297920 265760 290460 267210 279560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1062599999.9999999 1426 471 1363 2638;2639;2640;2641 2148;2149 2149 2 9606 Homo sapiens 0.014606954612872869 ALADENEFVR Unmodified 1162.5619 0.56185177 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 2 0 1 47.426 47.502 2 4.4552E-05 13275 20230619_1881_Aki_TMTPro18x_K_F2 169.09 131.36 140300 119950 141790 153440 155750 177390 178670 176490 199420 183370 191040 190740 200920 166100 192810 207010 220690 215880 129780 110070 144220 152510 161330 177500 179440 180540 201620 185200 196860 192520 204360 174360 197820 207820 210850 204970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 213130000 1427 2863 1364 2642 2150 2150 1 9606 Homo sapiens -0.012926677416317034 ALADHSMAQTPR Oxidation (M) 1312.6194 0.61938343 3408 Q6IAX9;P08240-2;P08240;A0A024R3M0 SRPR Signal recognition particle receptor subunit alpha yes no 0 1 0 5 0 1 29.857 29.933 3 0.00020921 5679 20230619_1885_Aki_TMTPro18x_K_F5 96.313 80.925 27262 15667 23239 26992 30808 29131 28145 28777 33994 31077 34759 36273 33391 24521 34239 32741 37279 37423 25131 14454 24071 26336 31310 29283 28713 29486 34326 31437 35581 36182 34138 26138 34960 33034 35639 35494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56675000 1428 3408 1365 2643 2151 2151 2023 1 9606 Homo sapiens -0.024421488076995956 ALADHSMAQTPR Unmodified 1296.6245 0.62446881 3408 Q6IAX9;P08240-2;P08240;A0A024R3M0 SRPR Signal recognition particle receptor subunit alpha yes no 0 0 0 5.5 0.5 1 1 34.471 34.538 3 3.3257E-07 7445 20230619_1886_Aki_TMTPro18x_K_F6 147.26 110.28 35558 25462 41049 37172 41518 44063 44568 44700 49454 42632 42801 51805 50387 42184 43212 44215 53743 46825 32896 23417 41226 36670 43140 44038 44918 45563 49836 43479 44621 51810 50853 43937 44648 44551 51271 44473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68529000 1429 3408 1365 2644;2645 2152 2152 1 9606 Homo sapiens -0.011978449450907647 ALADTENLR Unmodified 1001.5142 0.5141733 4543 Q9HAV7;B4DWV5 GRPEL1 GrpE protein homolog 1, mitochondrial;GrpE protein homolog yes no 0 0 0 2.5 0.5 1 1 41.664 41.734 2 5.0554E-07 10343 20230619_1882_Aki_TMTPro18x_K_F3 217.81 95.678 182000 173290 203490 202370 284860 271630 247320 208970 227250 197110 243360 196750 185790 138590 332520 145490 165030 154520 168620 158820 206100 202890 287940 268130 250870 217600 233180 199890 246410 197840 198070 145350 325260 147230 159450 146710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 227350000 1430 4543 1366 2646;2647 2153;2154 2154 2 9606 Homo sapiens 0.01347678058175461 ALADYIR Unmodified 820.4443 0.44430282 1425 A0A8I5KU76;A0A384MEE7;Q9BS26;A0A8I5KW59;A0A8I5KVZ0;A0A8I5KTR3 ERP44 Endoplasmic reticulum resident protein 44 yes no 0 0 0 7.5 0.5 1 1 50.229 50.307 2 0.06021 13717 20230619_1887_Aki_TMTPro18x_K_F7 81.613 0 456350 402120 393860 446530 428580 518300 474500 450460 582580 211270 224160 190320 191990 180590 354830 237300 242610 165100 421700 368460 406210 448270 444320 517040 478760 458650 571800 226480 245580 194260 204930 189420 351080 233940 232670 157860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171030000 1431 1425 1367 2648;2649 2155;2156 2156 2 9606 Homo sapiens 0.02689844180235923 ALAEIAK Unmodified 714.42759 0.42759012 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 6.5 0.5 1 1 48.712 48.794 2 0.0092557 13417 20230619_1886_Aki_TMTPro18x_K_F6 119.57 8.2875 3603400 2676800 3302600 3449000 4011800 4242900 3975300 3737700 5143700 3818700 4109400 3856900 4247600 3398900 3544700 3902300 4740000 3784100 3327800 2457900 3391300 3429500 4111100 4218700 4044700 3855800 5129000 3859700 4268200 3899200 4297600 3548700 3684300 3906200 4517000 3598900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1546499999.9999998 1432 1450 1368 2650;2651 2157;2158 2157 2 9606 Homo sapiens 0.0589534329427579 ALAENSGVK Unmodified 887.47125 0.47124585 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C2U0 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 6 0 1 40.526 40.618 3 0.00013516 9778 20230619_1886_Aki_TMTPro18x_K_F6 114.89 84.64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1433 3621 1369 2652 2159 2159 1 9606 Homo sapiens 0.023009080007682314 ALAESWNAAFLESSAK Unmodified 1693.8312 0.83115034 911 C9J931;Q6NZ61;A8K005;A0A090N900;Q15382 RHEB GTP-binding protein Rheb yes no 0 0 0 7.5 0.5 1 1 62.627 62.657 3 1.3802E-08 18902 20230619_1888_Aki_TMTPro18x_K_F8 139.58 122.09 117840 97408 105680 116620 87412 116310 109960 104480 129750 142210 127960 150840 152510 125150 155560 141490 137330 167290 108880 89340 108170 116190 93059 117340 110200 108610 131100 141950 132650 151720 154960 130870 157050 143420 131780 158510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1221900000 1434 911 1370 2653;2654 2160 2160 1 9606 Homo sapiens 0.011988013642394435 ALAEVDVISLEQGKK Unmodified 1598.8879 0.88793694 2133 B0UZZ8;A8K9A1;O15213;B4DP15;A0A1U9X8W1;A0A1U9X8U7;A0A1U9X8U3;B4DNI0 C6orf11;WDR46 WD repeat-containing protein 46 yes no 0 0 1 7 0 1 57.761 57.813 4 3.352E-05 16950 20230619_1887_Aki_TMTPro18x_K_F7 101.62 89.264 60316 51341 59402 65047 49291 59527 65110 60358 70510 70872 64727 72589 74097 63992 71222 85235 74978 78828 55780 47110 60310 64492 52461 60623 64900 61919 71323 71113 67162 73314 75205 67402 72760 84912 71729 74925 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6255300 1435 2133 1371 2655 2161 2161 1 9606 Homo sapiens 0.11244848920728145 ALAEYVVQQEGAK Unmodified 1404.7249 0.72489436 1854 E9PNW8;Q9H600;A0A8V8TQT9;B2RDG1;Q8WVX9 FAR1 Fatty acyl-CoA reductase 1 yes no 0 0 0 6 0 1 56.043 56.117 3 8.4001E-06 16486 20230619_1886_Aki_TMTPro18x_K_F6 120.87 84.455 56110 46138 54209 51041 38950 45223 41032 45333 52036 59196 54884 45583 62704 46213 44455 69152 59949 57606 51871 42285 54963 51101 41765 46193 41651 46670 52557 58662 56430 46973 62845 48894 46518 68397 57193 54845 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23528000 1436 1854 1372 2656 2162 2162 1 9606 Homo sapiens 0.03872090589561594 ALAGCDFLTISPK Unmodified 1391.7119 0.71188683 1232 A0A140VK56;P37837-2;P37837;F2Z393 TALDO1 Transaldolase yes no 0 0 0 1.5 0.5 2 2 61.553 61.556 2;3 1.2114E-07 19278 20230619_1881_Aki_TMTPro18x_K_F2 162.26 109.54 83437 77273 87317 86600 86151 103540 101390 106220 110520 101720 94386 103300 102920 93099 106720 112510 105380 102250 77245 70800 88375 86956 90037 103470 101640 108170 111450 103090 98071 104440 105000 97354 108410 112170 100820 97240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1618399999.9999998 1437 1232 1373 2657;2658;2659;2660 2163;2164;2165 2165 3 9606 Homo sapiens 0.031699362058134284 ALAIYEGQLGPDNPNVAR Unmodified 1896.9694 0.96937516 740 A0A024RCZ8;Q9NSK0;Q9NSK0-3;Q9NSK0-5;H7C4M1 KLC4 Kinesin light chain 4 yes no 0 0 0 6 0 1 56.488 56.562 3 7.2034E-24 16689 20230619_1886_Aki_TMTPro18x_K_F6 203.05 189.92 31099 26889 29889 32119 33621 31408 32554 35179 36018 33972 33438 38751 39946 33900 35905 36741 38697 47811 28758 24658 30524 32007 34557 31920 33005 35644 36410 34538 34754 38940 40372 35297 36742 37491 37061 45260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40476000 1438 740 1374 2661 2166 2166 1 9606 Homo sapiens 0.0567692461270326 ALALAALAAVEPACGSR Acetyl (Protein N-term) 1681.8821 0.88214006 4429 Q9BT67-2;Q9BT67 NDFIP1 NEDD4 family-interacting protein 1 yes no 1 0 0 7.5 0.5 1 1 68.313 68.332 2 3.6328E-30 21243 20230619_1888_Aki_TMTPro18x_K_F8 150.69 136.49 3300.8 1190.5 2055.8 954.18 1990.7 2364.4 3068.5 2133.6 2838.7 1211.2 2844.3 2543.8 1167.2 3132.8 2328.4 984.68 3637 3889.6 3031.9 1090 2185.2 993.37 2105 2278.6 3021.4 2112.2 2893.5 1274.4 2746.8 2542.3 1243.9 3092.7 2411.9 1029.9 3469 3662.7 2 1 2 1 2 2 2 1 2 1 1 2 1 2 2 1 2 2 17470000 1439 4429 1375 2662;2663 2167;2168 2168 2 9606 Homo sapiens 0.06847427137427076 ALALLEDEER Unmodified 1157.5928 0.59281755 1556 A0A499FIX8;H7BXI1;A0FGR8-2;A0FGR8;A0FGR8-6 ESYT2 Extended synaptotagmin-2 yes no 0 0 0 1 0 1 56.922 56.922 2 3.5039E-16 17221 20230619_1880_Aki_TMTPro18x_K_F1 184.04 149.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1440 1556 1376 2664 2169 2169 1 9606 Homo sapiens 0.02032485572613041 ALALLEDWCR Acetyl (Protein N-term) 1287.6282 0.6281572 4070 Q5U5Z3;Q9UL42 PNMA2 Paraneoplastic antigen Ma2 yes no 1 0 0 4 0.816 1 1 1 68.174 68.208 2 4.9671E-07 21789 20230619_1882_Aki_TMTPro18x_K_F3 139.88 118.72 7420.5 6625.9 6512.5 6083.2 7599.3 6940.8 8046.1 7102.6 9568 6541.5 7557.6 7341.9 5605.5 8081.2 5837.1 7517.6 8883.5 5736.3 6858.5 6061.6 6703.6 6206.9 7811.7 6966.2 8129.5 7232.4 9568.4 6674 7762 7445 5821.9 8262.3 6107.9 7462.1 8448.4 5478.8 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 21058000 1441 4070 1377 2665;2666;2667 2170;2171;2172 2170 3 9606 Homo sapiens -0.004151751712470286 ALALNCFAPINDQEGAEAK Unmodified 2030.9731 0.97313991 809 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2;B4E0F9;A0A087WWG9 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 0 0 0 6 0 1 60.741 60.799 3 1.0766E-14 18436 20230619_1886_Aki_TMTPro18x_K_F6 157.42 134.94 52217 37441 50833 39287 28988 35229 40913 35638 43084 55628 47038 39621 60870 41539 41607 59631 46467 37581 48236 34318 51350 39524 32186 35961 40663 36927 44003 54648 48612 41044 60696 43770 43012 58352 44351 35961 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71956000 1442 809 1378 2668 2173 2173 1 9606 Homo sapiens -0.0011077367573761876 ALAMGYKPK Oxidation (M) 993.53174 0.53173762 3658 P55084-2;P55084;B4DY96;B5MD38;F5GZQ3;B4DDC9;D6W539 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 1 1 3.5 0.5 1 1 41.987 42.039 3 0.0069417 10403 20230619_1883_Aki_TMTPro18x_K_F4 77.318 52.18 224570 180550 206140 230160 357190 324970 343930 329750 357490 270790 321320 284940 279110 233420 312350 282920 290350 248670 207490 165710 213350 229580 358130 321640 347730 334870 361670 277350 329400 287100 287730 245040 315650 281740 277730 236700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 264840000 1443 3658 1379 2669;2670 2174 2174 2363 1 9606 Homo sapiens 0.03471302059494974 ALAMGYKPK Unmodified 977.53682 0.536823 3658 P55084-2;P55084;B4DY96;B5MD38;F5GZQ3;B4DDC9;D6W539 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 1 5 0 1 46.064 46.141 4 0.011041 12131 20230619_1885_Aki_TMTPro18x_K_F5 74.127 44.78 16769 13945 16938 17939 20257 21648 22032 20758 25177 21203 25325 19205 26344 16470 23684 21731 20911 21912 15509 12799 17251 17835 20821 21589 22202 21278 25460 21352 25978 19522 26679 17389 23967 21769 20041 20807 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24662000 1444 3658 1379 2671 2175 2175 1 9606 Homo sapiens 0.047156059221151736 ALANSLACQGK Unmodified 1131.5706 0.57064232 3378 P04075;V9HWN7;J3KPS3;P04075-2;A0A0M4FNU3;H3BR68 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 2 0 1 46.359 46.438 3 3.5193E-05 12816 20230619_1881_Aki_TMTPro18x_K_F2 116.77 79.069 320620 224050 310540 349210 344560 313230 348660 321140 432500 428440 436330 401280 425730 325290 459770 437910 430060 379710 296120 206240 316950 341740 354920 319740 353870 330560 436100 426420 446890 406110 436150 344120 465150 435100 411420 361450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1167800000 1445 3378 1380 2672 2176 2176 1 9606 Homo sapiens 0.01011982623208496 ALAPEYAK Unmodified 861.45962 0.45961853 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;A0A7P0Z4J0;B4DJS0;A0A7P0Z4S2;A0A7P0TAX9;A0A7P0Z476;I3NI03;A0A7P0TBP8;A0A7P0T9S9;B4DNP9;I3L3U6 P4HB Protein disulfide-isomerase yes no 0 0 0 6 0.816 1 1 1 45.338 45.422 2 0.0018648 11444 20230619_1887_Aki_TMTPro18x_K_F7 135.84 44.778 545610 467300 505590 511350 954970 971470 764940 795190 1061200 657680 760380 796240 775110 637040 683770 811310 900430 796400 504350 428180 523700 518840 951240 943580 790850 820270 1051300 677170 795050 796950 786530 671530 709520 811300 858710 756960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1379200000 1446 537 1381 2673;2674;2675 2177;2178 2178 2 9606 Homo sapiens 0.023347109774135788 ALAPLLLAFVTKPNSALESCSFAR Unmodified 2575.3832 0.38322947 162 A0A024R1U0;P46060;B4DY16;B4E0U0;Q9BSK3;Q8WUS7 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 1 8 0 1 65.569 65.589 3 2.3379E-05 20196 20230619_1888_Aki_TMTPro18x_K_F8 88.396 82.493 7977.4 7440.9 8419.5 7788.3 4501.3 4572.2 6641.7 6978.3 7124.5 8135.1 5580.9 4092.5 9776.2 6044.9 5978.9 7558.5 5132.8 5229.9 7386.4 6813.3 8451.4 7804.4 5038.2 4929.2 6594.9 6994.5 7182 8034.5 5969.3 4409.5 9646.3 6262.7 6108.3 7437.2 4919.8 4991.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21730000 1447 162 1382 2676 2179 2179 1 9606 Homo sapiens 0.15855318874218938 ALAPTWEQLALGLEHSETVK Unmodified 2192.1477 0.14773345 4089 Q86UY0;Q6EHZ3;Q658S9;Q8NBS9;A0A024QZV0;Q8NBS9-2 TXNDC5;STRF8;DKFZp666I134;hCG_1811539 Thioredoxin domain-containing protein 5 yes no 0 0 0 7 0 1 63.21 63.243 3 4.9366E-17 19292 20230619_1887_Aki_TMTPro18x_K_F7 168.09 140.76 214880 164370 214820 203040 178150 243220 213430 200470 248550 266810 317650 300190 252860 279770 319050 337120 293830 366460 198610 150850 217660 202410 189300 241810 214360 209580 253890 267160 319820 302710 263660 292030 322020 339440 281890 347490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 340410000 1448 4089 1383 2677 2180 2180 1 9606 Homo sapiens 0.09934549741092269 ALAQEDQGAGEVER Unmodified 1471.6903 0.69029976 859 A0A087WYQ1;O15020-2;O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes no 0 0 0 1 0 1 38.405 38.405 2 2.626E-17 9411 20230619_1880_Aki_TMTPro18x_K_F1 218.02 197.18 20661 16072 22943 22616 12900 11586 10225 12039 13587 19793 24330 25612 19865 16895 18573 25737 29251 23811 19116 14769 22946 22158 14105 12575 10615 12499 14095 19746 24264 25442 20364 18173 19537 25590 27847 22656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30969000 1449 859 1384 2678 2181 2181 1 9606 Homo sapiens -0.026677772892071516 ALAQGYR Unmodified 777.41334 0.41333704 4033 Q5HYK3;F8VVX6;F8VP53;F8VVW7 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes no 0 0 0 8 0 1 35.88 35.868 2 0.02475 7833 20230619_1888_Aki_TMTPro18x_K_F8 98.807 44.043 67729 51294 75572 71821 104390 118520 103130 103170 133570 47467 57391 49427 48188 43635 71124 46462 71532 44923 62658 47139 76550 71438 106160 115890 104910 104920 131020 51194 62059 49970 50630 45335 71793 46648 68253 42782 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44728000 1450 4033 1385 2679 2182 2182 1 9606 Homo sapiens 0.015726908659985384 ALASILLQDHIR Unmodified 1348.7827 0.78268401 4099 Q6DD88;F5H6I7;B4DXC4;F5GWF8 ATL3 Atlastin-3 yes no 0 0 0 3 0 1 57.825 57.856 3 1.0588E-40 17535 20230619_1882_Aki_TMTPro18x_K_F3 299.29 232.6 31138 26764 24101 33830 29598 31601 31717 32860 34930 30262 30711 27368 30594 26020 33081 40689 36574 33453 28748 24557 25209 33541 30376 32155 31951 33419 35226 30641 31691 27914 31356 27653 33830 40223 34939 31861 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11029000 1451 4099 1386 2680 2183 2183 1 9606 Homo sapiens 0.12224397305658385 ALASLMTYK Unmodified 996.5314 0.53140327 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;P00367-3;A0A804HJD7;B3KT18;A0A804HKE0;P49448;A0A140VK14;Q59FQ4;A0A804HJZ0 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 4 0 1 60.54 60.542 2 0.0031465 18583 20230619_1883_Aki_TMTPro18x_K_F4 111.95 66.866 27179 24308 25657 23594 34670 63108 35237 30979 59559 17985 15745 16591 19994 18888 19832 20700 20934 22101 25134 22247 26350 24388 35566 60012 36185 33502 57422 18963 18406 17000 20302 19500 20235 20849 20027 20972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13002000 1452 2542 1387 2681 2184 2184 1 9606 Homo sapiens 0.03299882339638316 ALATNPALR Unmodified 925.53451 0.53451481 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2 UBR4 E3 ubiquitin-protein ligase UBR4 no no 0 0 0 1.5 0.5 1 1 40.941 40.941 2 0.0098634 10259 20230619_1881_Aki_TMTPro18x_K_F2 82.75 55.496 35610 26941 40256 38950 54603 53553 46808 48480 54322 41791 52238 53835 52567 42155 48987 41347 58468 57301 32948 24768 40707 38530 55313 52928 47884 49687 54795 42979 53720 53700 53460 43856 50353 42482 55842 54260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38936000 1453 4061 1389 2682;2683 2185;2186 2186 2 9606 Homo sapiens 0.06876893508638204 ALAVEGK Unmodified 686.39629 0.39629 2337;3778;3779;859 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;A4QPE4;Q01082-2;Q01082-3;A0A087WYQ1;O15020-2;O15020 SPTBN1;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, non-erythrocytic 2 no no 0 0 0 6 0 1 43.216 43.309 2 0.025649 10965 20230619_1886_Aki_TMTPro18x_K_F6 97.602 37.244 108640 73858 121420 127300 154120 164530 140980 163030 172070 130550 166040 196340 161420 157800 168630 128270 202620 202720 100450 68085 122800 124580 157100 163410 143920 165720 173140 135720 170670 194880 165410 162450 172990 133690 193530 191750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67193000 1454 2337;3778;3779;859 1390 2684 2187 2187 1 9606 Homo sapiens 0.04054770260188434 ALAVNPR Unmodified 739.43407 0.43407249 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 7.5 0.5 1 1 36.676 36.663 2 0.009131 7968 20230619_1887_Aki_TMTPro18x_K_F7 106.29 29.694 138910 84632 120750 140620 190590 176530 161180 159800 201350 159610 202140 194430 178620 164980 187930 117850 230400 202960 128110 78018 125310 137760 191490 175400 165420 164400 202720 162470 206300 194690 183610 168730 192860 124200 219840 191970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56000000 1455 1292 1391 2685;2686 2188;2189 2188 2 9606 Homo sapiens 0.05393281245653725 ALAVVYGPHEIR Unmodified 1323.7299 0.72992016 4560 Q9NPD3;A0A994J4D9;E9PPI9 EXOSC4 Exosome complex component RRP41 yes no 0 0 0 8 0 1 46.775 46.824 3 3.6175E-05 12182 20230619_1888_Aki_TMTPro18x_K_F8 119.55 92.877 48170 39700 43925 52086 49578 53096 54543 52380 53876 51746 54044 51597 53712 42414 48143 57941 57753 54913 44511 36446 45109 51582 51165 53597 54683 53559 54932 52320 55413 52103 54552 44887 49637 57776 55145 52199 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79200000 1456 4560 1392 2687 2190 2190 1 9606 Homo sapiens 0.08100439242844004 ALCAEADR Unmodified 904.40727 0.40726539 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 34.931 34.959 2 0.0041195 7650 20230619_1881_Aki_TMTPro18x_K_F2 117.39 58.407 99973 48311 117570 118200 142590 161460 137260 165300 146550 117800 165190 197710 163120 149950 164020 87050 193270 188850 92341 44878 118360 114080 145960 159880 139090 167240 149370 124000 168770 195230 166670 152980 167930 94460 184600 178310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 213970000 1457 1022;3868 1393 2688;2689 2191 2191 1 9606 Homo sapiens -0.04876195427846142 ALCDVGTAISCSR Unmodified 1408.6439 0.64388362 988 A0A0B5EEB2;A0A0S2Z5X7;I3L3B4;F8W9H0;A0A0S2Z6I4;E9PLN8;Q9BQB6-3;Q9BQB6-2;Q9BQB6 VKORC1 Vitamin K epoxide reductase complex subunit 1 yes no 0 0 0 7.5 0.5 1 1 49.229 49.307 3 6.8632E-07 13216 20230619_1888_Aki_TMTPro18x_K_F8 143.31 117.4 102890 85569 96267 104960 99306 119830 104960 106340 137780 110610 93312 97261 109280 89926 104490 115100 282480 115840 95096 78498 98449 104590 103210 119710 106500 109670 136720 111230 98569 99089 111070 94371 116130 115270 267400 110630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 506320000 1458 988 1394 2690;2691 2192;2193 2193 2 9606 Homo sapiens -0.04409256716462551 ALCEAAGCGSALLWPR Acetyl (Protein N-term) 1772.8338 0.83380965 1185 A0A140VJL6;Q2TAA2;F8WF34 IAH1 Isoamyl acetate-hydrolyzing esterase 1 homolog yes no 1 0 0 7 0 1 64.471 64.501 2 1.5634000000000001E-25 19864 20230619_1887_Aki_TMTPro18x_K_F7 148.28 129.5 23624 27304 22138 27941 22214 27173 28639 29635 36216 30495 23633 23833 35529 25381 29754 30654 29990 39687 21889 24981 22656 28166 23274 27599 28725 30124 35972 30584 25363 24550 35581 26459 30377 31216 28759 37564 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 119340000 1459 1185 1395 2692 2194;2195 2194 2 9606 Homo sapiens -0.021693897740988177 ALCGLDESK Unmodified 991.46445 0.46444592 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 4 0 1 47.393 47.435 3 0.0031762 12806 20230619_1883_Aki_TMTPro18x_K_F4 72.607 45.492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1460 2417 1396 2693 2196 2196 1 9606 Homo sapiens -0.03162772942118863 ALCQITDSTMLQAIER Unmodified 1848.9074 0.90736853 4753 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 7 0 1 62.524 62.559 3 0.0071838 18985 20230619_1887_Aki_TMTPro18x_K_F7 52.569 39.156 101350 81682 96839 69925 86712 131510 102980 85185 104610 117670 131830 130090 102680 78511 130340 135990 81555 170580 93675 74715 98481 72482 91587 127220 102950 91089 107570 117540 132750 129780 106900 85824 129440 137610 79119 161320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1155400000 1461 4753 1397 2694 2197 2197 1 9606 Homo sapiens 0.01687113877687807 ALCTAHEK Unmodified 928.44365 0.44365089 2733 C9J0I9;Q86WB0;Q86WB0-3;Q86WB0-2;A4D1L4 ZC3HC1;NIPA Nuclear-interacting partner of ALK yes no 0 0 0 5.5 0.5 1 1 33.26 33.322 3 0.082945 6876 20230619_1885_Aki_TMTPro18x_K_F5 42.287 23.184 25686 16170 32347 34207 53996 51858 38833 47461 52568 30689 43849 50148 34456 38614 42512 25711 46731 44365 23768 14959 32631 33256 53911 50975 40467 48309 52349 32539 45042 49598 35918 39499 43224 27152 44655 41949 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23225000 1462 2733 1398 2695;2696 2198 2198 1 9606 Homo sapiens -0.023433185311205307 ALCYVISGQDQR Unmodified 1408.6769 0.67689831 2130 A8K940;Q66K74-2;Q66K74;M0R1M7 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 0 8 0 1 51.464 51.541 2 0.013714 14183 20230619_1888_Aki_TMTPro18x_K_F8 74.533 56.669 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1463 2130 1399 2697 2199 2199 1 9606 Homo sapiens -0.011093066021430786 ALDAAFYK Unmodified 897.45962 0.45961853 560 A0A024R983;P10155;P10155-3;P10155-5;P10155-4;B3KN94;G5E9R9 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 0 0 8 0 1 55.043 55.11 3 0.054197 15759 20230619_1888_Aki_TMTPro18x_K_F8 51.854 26.932 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1464 560 1400 2698 2200 2200 1 9606 Homo sapiens 0.0067871097741090125 ALDCSEVTVR Unmodified 1148.5496 0.54957253 4137 Q6XQN6;Q6XQN6-2;G5E977;Q6XQN6-3;C9J8U2;H0YF31 NAPRT Nicotinate phosphoribosyltransferase yes no 0 0 0 3 0 1 42.457 42.523 2 1.9307E-16 10687 20230619_1882_Aki_TMTPro18x_K_F3 213.85 185.68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1465 4137 1401 2699 2201 2201 1 9606 Homo sapiens -0.01876027476305353 ALDCSSSIR Unmodified 1007.4706 0.47059393 317 A0A024R534;O94776;O94776-2 MTA2 Metastasis-associated protein MTA2 yes no 0 0 0 5 0 1 37.686 37.778 2 2.2228E-08 8582 20230619_1885_Aki_TMTPro18x_K_F5 209.87 162.79 46593 35677 38315 41669 54621 55712 55898 54564 70188 50438 49547 45718 62021 46455 42601 51209 61477 51123 43003 32724 39878 41780 55483 55256 56687 55693 69835 51101 52303 46673 61964 48185 44742 51358 58566 48596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76455000 1466 317 1402 2700 2202 2202 1 9606 Homo sapiens -0.03284254710592904 ALDCSSSVR Unmodified 993.45494 0.45494386 2900;2897;4026 E9PCS8;E7EQY4;E7EV10;Q9BTC8-2;Q9BTC8;F6RRE2;Q53RX8;E7ESY4;Q13330-3;Q13330;A0A024R6P5;Q13330-2;H0Y4T7;Q86TR6;Q59FW1 MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 no no 0 0 0 3.5 0.5 1 1 34.814 34.87 2 3.3052E-05 7477 20230619_1883_Aki_TMTPro18x_K_F4 166.52 129.82 55444 29745 75078 67868 88459 97309 73090 82500 74365 64107 99549 97299 94915 83685 87243 39885 105460 93213 51308 27577 74784 65726 90346 95741 74707 84785 76626 66797 100730 96743 96660 84507 89575 43943 100650 88014 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72660000 1467 2897;2900;4026 1403 2701;2702 2203 2203 1 9606 Homo sapiens -0.04204541227636582 ALDDFVLGSAR Unmodified 1162.5982 0.59823728 20 B3KN29;A0A024QZ22;O60831;A6NP52 PRAF2 PRA1 family protein 2 yes no 0 0 0 5.5 0.5 1 1 58.965 59.025 2 2.0918E-08 17694 20230619_1886_Aki_TMTPro18x_K_F6 192.64 172.47 225190 198810 210340 242710 178210 212090 236920 244290 252840 221100 232600 263690 243090 229170 288740 245330 266060 322800 208220 182330 214650 241140 189360 217510 236030 246800 255750 225980 240430 264510 250070 238390 291330 250740 255170 305570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 180600000 1468 20 1404 2703;2704 2204;2205 2205 2 9606 Homo sapiens 0.023442091550805344 ALDDISESIK Unmodified 1089.5554 0.55536941 2964 H0YG54;H0YGR4;F5GYG5;Q9Y3B8-2;Q9Y3B8-3;Q9Y3B8 REXO2 Oligoribonuclease, mitochondrial yes no 0 0 0 3.33 0.471 2 1 55.909 55.934 2;3 2.8423E-16 16803 20230619_1882_Aki_TMTPro18x_K_F3 208.03 69.132 92019 76528 82331 88668 98474 105590 109000 93635 115810 121970 102580 97119 129300 94038 94618 144860 110270 108030 85022 70166 84731 88775 101280 105250 109440 97256 117190 121010 106970 99685 129370 99833 97968 142540 105330 103010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1017399999.9999999 1469 2964 1405 2705;2706;2707 2206;2207 2206 2 9606 Homo sapiens 0.014173943069863526 ALDDMISTLK Oxidation (M) 1121.5638 0.56382561 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2;E9PRC8;Q5SZX6;Q5SZX9;E9PM09;Q5SZW8;E9PQ35 CCT3 T-complex protein 1 subunit gamma yes no 0 1 0 4.5 0.5 1 1 53.026 53.071 3 0.041179 15102 20230619_1885_Aki_TMTPro18x_K_F5 45.565 29.341 45187 37924 44566 49041 51225 49372 50391 51981 60178 52475 54587 55916 58496 43053 53222 67094 58479 60535 41785 34808 45440 48616 52613 49976 51164 52939 60522 53112 56449 56204 59290 46123 54581 66623 55916 57558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 258380000 1470 2435 1406 2708;2709 2208 2208 1495 1 9606 Homo sapiens 0.007906249519464836 ALDDMISTLK Unmodified 1105.5689 0.56891099 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2;E9PRC8;Q5SZX6;Q5SZX9;E9PM09;Q5SZW8;E9PQ35 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 6.5 0.5 1 1 62.604 62.647 3 0.00010704 19304 20230619_1886_Aki_TMTPro18x_K_F6 112.75 76.055 506130 338400 445460 472410 340900 545360 430930 429990 544830 572120 527390 599990 691290 621890 499560 788400 696260 814730 467000 311140 456310 466810 366480 542750 432980 451110 548300 571680 549400 608680 691690 649500 523860 790110 665090 773120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1948299999.9999998 1471 2435 1406 2710;2711 2209;2210 2209 2 9606 Homo sapiens 0.02034928814578052 ALDDMISTLKK Unmodified 1233.6639 0.663874 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2;E9PRC8;Q5SZX6;E9PM09;Q5SZW8;E9PQ35 CCT3 T-complex protein 1 subunit gamma yes no 0 0 1 2 0 1 60.984 60.995 3 9.4073E-05 19015 20230619_1881_Aki_TMTPro18x_K_F2 121.68 66.254 301300 302290 316830 314720 299080 305710 320870 326240 273590 357280 346410 243860 296460 203240 388650 228640 215090 139810 279110 276720 320230 316940 312220 310530 321050 332650 284670 355680 349360 251430 307900 212510 383100 225000 206950 134010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207770000 1472 2435 1407 2712 2211 2211 1 9606 Homo sapiens 0.056388622857411974 ALDDTAR Unmodified 760.37153 0.37153181 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 LMNB1 Lamin-B1 yes no 0 0 0 1 0 1 32.914 32.914 2 0.0037147 7151 20230619_1880_Aki_TMTPro18x_K_F1 153.15 64.414 93859 37036 135920 143820 207260 187940 111570 153370 105170 81976 175820 205850 97511 136270 181370 34318 202130 178440 86830 34849 135590 136770 206620 185760 118100 157130 110150 90399 173980 200730 106340 137340 183260 44694 193040 168040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81944000 1473 3482 1408 2713 2212 2212 1 9606 Homo sapiens -0.018239096131992483 ALDEGDIALLK Unmodified 1156.634 0.63395408 1235 C9JX88;A0A140VK70;P35998;C9JLS9 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 4 0.816 2 2 2 60.807 60.834 2;3 1.1667E-08 18650 20230619_1883_Aki_TMTPro18x_K_F4 211.27 124.59 341420 285720 309130 346820 315010 356930 359260 335030 418900 405900 371470 358290 430550 340650 376400 464050 377510 415840 315500 262080 317050 345350 328130 359690 361450 345760 421650 405070 385850 365460 434810 358610 384270 461380 361460 395340 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 226820000 1474 1235 1409 2714;2715;2716;2717;2718;2719 2213;2214;2215;2216 2214 4 9606 Homo sapiens 0.061902466120727695 ALDELFEAIEQK Unmodified 1404.7137 0.71366097 1616 Q27J81;Q27J81-2;A0A6Q8PHA2;A0A6Q8PH71;A0A6Q8PHG2;A0A6Q8PGN3;A0A6Q8PF44;A0A6Q8PH25;A0A6Q8PF29;A0A087X118;A0A6Q8PFW4;A0A6Q8PGC7;A0A0A0MQU1;A0A6Q8PHS8 INF2 Inverted formin-2 yes no 0 0 0 5.5 0.5 1 1 66.083 66.126 3 0.0076641 20617 20230619_1885_Aki_TMTPro18x_K_F5 52.495 32.399 10672 9563.2 11038 11729 11732 12826 13014 10137 11769 14193 16659 15074 15442 13504 12374 16374 12894 15524 9876.4 8770.6 11198 11679 12158 12827 13008 10662 12261 14153 16795 15217 15651 14130 12689 16350 12350 14744 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17482000 1475 1616 1410 2720;2721 2217 2217 1 9606 Homo sapiens 0.02749268495404067 ALDEVTSSQPPPLPPPPPPAQETQEPSPILDSEETR Unmodified 3845.8847 0.88470864 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;B3KSQ7;B7Z2Z0;D6R9Q9 DBN1 Drebrin yes no 0 0 0 2.5 0.5 1 1 61.565 61.585 4 2.8857E-33 19245 20230619_1881_Aki_TMTPro18x_K_F2 179.8 170.91 33974 29663 32911 35412 28775 32384 25889 29843 44097 33855 31778 28022 30840 26400 37854 33800 34070 38057 31420 27200 33463 35253 30187 32926 26854 30770 43382 33852 33127 28670 31843 27693 38140 34095 32662 36087 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 235250000 1476 1396 1411 2722;2723 2218;2219 2218 2 9606 Homo sapiens 0.07560167492511027 ALDEYYDK Unmodified 1015.4498 0.44984171 3566 P38606-2;P38606;A0A994J738;B7Z2V6 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 0 3.67 0.471 1 2 49.867 49.921 2;3 0.0022887 14107 20230619_1882_Aki_TMTPro18x_K_F3 137 107.02 261740 223570 247880 278980 233110 262150 277880 273220 292810 344430 409690 439800 392540 331630 350890 459220 469070 446930 241990 205110 252940 276970 244540 266640 278190 280380 302190 346980 414260 438550 399260 352300 364660 458400 447510 424710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 453100000 1477 3566 1412 2724;2725;2726 2220;2221 2220 2 9606 Homo sapiens -0.05726521818621677 ALDFIASK Unmodified 863.47527 0.4752686 387;1069 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;G3V2N5;A0A804HJQ9;G3V2W4;B4DRP5;A0A804HJN7;Q08043;B2R8Y4;G3V2X9;A0A087WSZ2;B4DZQ2;G3V5M4;A0A804HIY0;G3V2E8;F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;B4E337;B4DSX0 ACTN1;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-3;Alpha-actinin-4 no no 0 0 0 4.5 3.5 1 1 58.46 58.484 3 0.0024067 17169 20230619_1888_Aki_TMTPro18x_K_F8 104.44 52.583 315870 265600 270910 268580 263910 288620 337250 329310 372330 374360 351310 305590 405030 289450 342800 412800 362850 342670 291780 243210 278850 271520 276730 291420 336840 334730 376620 373800 363450 313090 408350 305850 351160 408710 346840 326280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 326970000 1478 387;1069 1413 2727;2728 2222;2223 2223 2 9606 Homo sapiens 0.03806997494461939 ALDGAFTEENR Unmodified 1221.5626 0.56258006 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 2 0 1 46.393 46.473 2 1.022E-33 12808 20230619_1881_Aki_TMTPro18x_K_F2 240.38 196.57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1479 1292 1414 2729 2224 2224 1 9606 Homo sapiens -0.03933873092569229 ALDGPEQMELEEGK Acetyl (Protein N-term) 1586.7134 0.71340297 1202 P62195;A0A140VJS3;J3QQM1;J3QSE0;A0A994J3X6;J3KTQ9 PSMC5 26S protease regulatory subunit 8 yes no 1 0 0 1.5 0.5 1 1 60.043 60.043 2 2.7326E-10 18559 20230619_1880_Aki_TMTPro18x_K_F1 140.3 101.15 77341 63326 67057 69668 65816 80023 77712 75301 85327 90335 79291 86269 107140 77371 89423 103370 96406 99702 71436 58037 68983 69997 68866 80029 77901 77652 86340 90362 82907 87453 107540 81547 91703 103210 92195 94724 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190300000 1480 1202 1415 2730;2731 2225;2226;2227 2226 3 9606 Homo sapiens -0.056485192867057776 ALDGPEQMELEEGK Acetyl (Protein N-term);Oxidation (M) 1602.7083 0.70831759 1202 P62195;A0A140VJS3;J3QQM1;J3QSE0;A0A994J3X6;J3KTQ9 PSMC5 26S protease regulatory subunit 8 yes no 1 1 0 1 0 1 55.429 55.429 2 0.00051713 16595 20230619_1880_Aki_TMTPro18x_K_F1 85.377 73.887 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1481 1202 1415 2732 2228 2228 736 1 9606 Homo sapiens -0.06892823149337346 ALDIAENEMPGLMR 2 Oxidation (M) 1590.7382 0.73817794 1439 A0A384MTQ3;P23526 AHCY Adenosylhomocysteinase yes no 0 2 0 2.5 0.5 1 1 50.242 50.305 3 0.010927 14596 20230619_1881_Aki_TMTPro18x_K_F2 61.649 50.209 68444 50199 65488 69253 73582 77282 74040 78135 94828 76501 85005 87640 85938 75131 77776 92319 97268 92095 63225 46131 66910 68468 75810 77551 75276 79710 94981 77772 87728 88066 87333 78802 80385 92443 92841 87494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253560000 1482 1439 1416 2733;2734 2229 2229 930;931 1 9606 Homo sapiens -0.03356162685008712 ALDIAENEMPGLMR Oxidation (M) 1574.7433 0.74326331 1439 A0A384MTQ3;P23526 AHCY Adenosylhomocysteinase yes no 0 1 0 3.5 0.5 1 1 58.351 58.367 3 0.0004848 17621 20230619_1883_Aki_TMTPro18x_K_F4 87.233 80.797 50543 45337 46896 53801 45747 55021 53078 55788 53974 65692 63438 58734 62071 55431 57079 68153 58353 71668 46736 41566 47973 53657 47840 55559 53146 57195 55369 65622 64553 59847 63166 57966 58269 68445 55912 67984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 346090000 1483 1439 1416 2735;2736 2230 2230 930;931 1 9606 Homo sapiens -0.021118588223998813 ALDIAENEMPGLMR Unmodified 1558.7483 0.74834869 1439 A0A384MTQ3;P23526 AHCY Adenosylhomocysteinase yes no 0 0 0 4.5 0.5 1 1 61.904 61.931 3 7.9472E-12 19113 20230619_1883_Aki_TMTPro18x_K_F4 180.61 160.23 106420 82574 98898 100430 91008 114190 104990 106370 116000 130010 114370 110930 139130 124510 121930 133430 131960 145810 98318 75764 101000 100150 95663 114220 105430 109820 117620 129550 118490 113940 140440 128490 124910 134600 126260 138310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 906310000 1484 1439 1416 2737;2738 2231;2232 2231 2 9606 Homo sapiens -0.008675549597910504 ALDIPLVK Unmodified 867.54295 0.54295423 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 8 0 1 59.542 59.583 3 0.0079845 17612 20230619_1888_Aki_TMTPro18x_K_F8 74.127 41.287 44421 34889 33874 38337 42216 48136 44377 44479 46018 47808 47750 48363 54215 48486 48883 53552 51267 55679 40984 31979 35444 38568 43282 47853 44667 45771 46885 48158 49203 49082 54888 50274 49960 53843 49059 52846 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17103000 1485 1863 1417 2739 2233 2233 1 9606 Homo sapiens 0.10388447425293634 ALDLDSSCK Unmodified 1007.4594 0.45936054 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;H0YGI8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 4 0.816 1 1 1 47.264 47.33 3 4.2648E-05 12734 20230619_1883_Aki_TMTPro18x_K_F4 127.68 54.014 352620 263430 315410 348890 331330 350110 349610 331940 436830 416130 451150 459770 470160 411210 397610 457580 516980 462480 325600 241950 323910 345270 343490 353560 354150 342750 440630 417470 463010 463080 475980 428150 412480 459230 493120 439420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 987750000 1486 2088 1418 2740;2741;2742 2234 2234 1 9606 Homo sapiens -0.04407076804727694 ALDLFSDNAPPPELLEIINEDIAK Unmodified 2636.3585 0.35851409 1478 A0A384NPU5;Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 0 5 0 1 67.66 67.702 3 0.0056359 21251 20230619_1885_Aki_TMTPro18x_K_F5 59.814 47.511 3569.8 2249.6 3446.7 3765.2 2954.1 3922.5 3802.3 3230.1 3904.2 4957 4050.5 5495.8 2907.5 3543.1 5125.6 5355.2 5805.8 4814.4 3295.2 2073.7 3507 3676.9 3135 3935.3 3787.5 3396.6 3982.4 4930.8 4113.3 5481.8 3118.6 3808.4 5211.6 5321.5 5541.5 4582.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7615900 1487 1478 1419 2743 2235 2235 1 9606 Homo sapiens 0.10578917481871031 ALDLVAAK Unmodified 799.48035 0.48035398 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;O43242-2;H0YGV8 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 8 0 1 53.878 53.949 2 0.001673 15259 20230619_1888_Aki_TMTPro18x_K_F8 138.9 43.543 518610 418620 444100 487300 509640 552690 562960 544550 653930 494570 469350 471800 529030 413880 485060 601150 551070 484360 478940 383880 458610 487410 525800 553810 567100 555560 653360 502110 492920 478360 535890 438740 498270 594220 526160 461530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 323870000 1488 2361 1420 2744 2236 2236 1 9606 Homo sapiens 0.0725930135707813 ALDMLDAEK Unmodified 1004.4848 0.48484701 2082 A8K5Y7;Q9HAV4;B3KPQ5;B3KNC6;Q9H8N6 XPO5 Exportin-5 yes no 0 0 0 3.5 0.5 1 1 56.972 56.991 2;3 0.00025249 17201 20230619_1882_Aki_TMTPro18x_K_F3 116.52 74.537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1489 2082 1421 2745;2746 2237;2238 2237 2 9606 Homo sapiens -0.017216022823163257 ALDMSYDHKPEDEVELAR Unmodified 2116.9735 0.97353384 2230 Q6IAU5;B2R665;O15355;B4DDC8;B3KXL8;Q96IN7;Q59GB2 PPM1G Protein phosphatase 1G yes no 0 0 1 3 0 1 48.861 48.939 4 7.7117E-07 13670 20230619_1882_Aki_TMTPro18x_K_F3 118.05 108.09 159730 148600 158710 184300 154650 158050 185230 166780 176300 184950 173990 156390 180600 129110 151330 208460 189940 177310 147820 136280 161400 182840 161610 162080 184700 170380 180110 185020 178790 159270 182600 138370 156840 206280 181270 168790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 405700000 1490 2230 1422 2747 2239 2239 1 9606 Homo sapiens -0.04027398746529798 ALDPDSGVNSR Unmodified 1129.5364 0.53636531 4373 Q96JQ0 DCHS1 Protocadherin-16 yes yes 0 0 0 2 0 1 37.95 38.013 2 0.00012595 8902 20230619_1881_Aki_TMTPro18x_K_F2 144.77 118.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1491 4373 1423 2748 2240 2240 1 9606 Homo sapiens -0.023221422640290257 ALDQSDNDMSAVYR Unmodified 1583.6886 0.68858521 2827 K7EMM8;D3DUE6;Q49A26-5;Q49A26-2;Q49A26;D3DUE7;Q49A26-4;Q49A26-3 GLYR1;N-PAC Putative oxidoreductase GLYR1 yes no 0 0 0 3 0 1 47.743 47.822 2 9.9308E-22 13172 20230619_1882_Aki_TMTPro18x_K_F3 229.54 222.66 20515 13141 14566 14782 15289 18380 16488 19289 22704 23685 24867 21977 24194 20144 19126 23053 26757 23994 18899 12058 15304 14849 15895 18332 16756 19743 22868 23648 25353 22332 24476 21000 19979 23161 25508 22790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39295000 1492 2827 1424 2749 2241 2241 1 9606 Homo sapiens -0.07991154369460673 ALDTMNFDVIK Oxidation (M) 1281.6275 0.6274885 566;1667 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A024R9E2;H0YBN4;E5RJB9;E5RGH3;E5RH24;Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;B1ANR1;H0YEQ8 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 4 no no 0 1 0 5 0.816 1 1 1 57.314 57.36 3 0.00014579 16822 20230619_1885_Aki_TMTPro18x_K_F5 112.13 89.247 192450 155450 166590 191080 223200 208340 205660 196730 237180 201310 202700 173100 197590 158980 202520 223460 189440 187920 177740 142620 172320 190250 226680 209220 209300 201930 238440 202430 209210 176720 201990 167890 205260 221480 181370 178870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 812430000 1493 566;1667 1425 2750;2751;2752 2242;2243 2242 332 2 9606 Homo sapiens -0.0020601461094429396 ALDTMNFDVIK Unmodified 1265.6326 0.63257388 566;1667 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A024R9E2;H0YBN4;E5RJB9;E5RGH3;E5RH24;Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;B1ANR1;H0YEQ8 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 4 no no 0 0 0 6.5 0.5 1 1 61.888 61.934 3 1.4537E-06 18660 20230619_1887_Aki_TMTPro18x_K_F7 158.41 125.46 579320 510270 633370 635580 482220 566380 650350 582880 714120 680870 603080 583250 694120 532680 611310 803860 609700 536130 536350 468080 636710 630810 517440 578350 647980 597290 719620 679980 627870 595180 701240 565390 624060 787950 582860 512320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1633999999.9999998 1494 566;1667 1425 2753;2754 2244;2245 2245 2 9606 Homo sapiens 0.01038289251664537 ALDTVLFGPPLLTR Unmodified 1511.8712 0.87116466 1826 E9PRZ7;E9PNJ4;A0A8V8TMG1;A0A8V8TP73;V5J3L2;A0A8V8TNW5;A0A8V8TMG5;H0YDB2;A0A8V8TNW0;G0XQ39;Q13586-2;Q13586;A0A8V8TMF0;E9PIQ8 STIM1 Stromal interaction molecule 1 yes no 0 0 0 3.5 0.5 1 1 64.616 64.637 3 0.00063956 20405 20230619_1882_Aki_TMTPro18x_K_F3 87.083 68.338 9676.3 7501.1 9879.8 8896.5 7798.2 10402 9168.5 9360.4 11555 10203 11241 8992.2 11577 9156.8 12431 11385 10118 11763 8946 6880.8 9983.3 8893.3 8319 10376 9244.1 9655.3 11618 10235 11551 9201.2 11837 9564.1 12493 11430 9714.4 11163 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22339000 1495 1826 1426 2755;2756 2246 2246 1 9606 Homo sapiens 0.13570392825454292 ALDVADLQK Unmodified 971.52876 0.52876073 2449 B3LEU8;Q6NUQ4-2;Q6NUQ4;B4DLT7;H7C0H8 TMEM214 Transmembrane protein 214 yes no 0 0 0 5 0 1 53.431 53.503 2 0.0017638 15256 20230619_1885_Aki_TMTPro18x_K_F5 124.23 68.847 53175 42054 53293 51932 51232 66286 63566 60441 73243 64440 61604 66676 78113 57237 59229 84876 76083 83577 49160 38589 54107 51829 53790 65777 63663 62253 73602 65001 64496 67295 78263 60857 61635 84686 72685 79368 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26526000 1496 2449 1427 2757 2247 2247 1 9606 Homo sapiens 0.041857502063294305 ALDVGSGSGILTACFAR Unmodified 1693.8458 0.84575455 1398 B7Z972;A0A384MDK7;A0A3F2YNX8;P22061;P22061-2;C9J0F2 PCMT1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 2 0 1 61.221 61.232 3 6.9604E-31 19114 20230619_1881_Aki_TMTPro18x_K_F2 193.96 165.15 94263 79805 91380 103850 85277 95111 100360 102090 108700 109600 101480 105060 108030 98683 109220 124300 109020 102320 87159 73250 93052 102780 89474 96994 100600 104030 110030 110210 104800 106660 110160 103300 111110 123240 104270 97439 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 737110000 1497 1398 1428 2758 2248 2248 1 9606 Homo sapiens 0.026585502407215245 ALDVIQAGK Unmodified 913.52328 0.52328142 3321 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 0 7.5 0.5 1 1 51.666 51.742 3 0.038264 14377 20230619_1887_Aki_TMTPro18x_K_F7 46.891 17.224 301470 268540 290850 293110 353040 396310 333520 301600 402630 410610 425590 466070 396150 327340 374590 419530 428700 471320 278830 246020 297290 295380 361430 390850 339510 317630 407310 410830 434540 465640 404190 347200 384540 422850 409950 446960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 354980000 1498 3321 1429 2759;2760 2249;2250 2249 2 9606 Homo sapiens 0.06306071414519465 ALDVMVSTFHK Unmodified 1246.638 0.63799361 3508 P26447 S100A4 Protein S100-A4 yes yes 0 0 0 2 0 1 58.216 58.23 3 2.4285E-06 17908 20230619_1881_Aki_TMTPro18x_K_F2 130.56 98.5 20828 16644 18395 20129 13049 19432 25744 21882 23097 25831 25499 26263 24011 24970 30296 27596 29490 33778 19238 15269 18833 20038 14349 19747 25129 22302 23776 25901 26010 26594 24883 25930 30639 28043 28253 32001 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5805000 1499 3508 1430 2761 2251 2251 1 9606 Homo sapiens 0.02454012834164132 ALDVNVALR Unmodified 969.56073 0.56072956 3420 P09455;A0A0A0MQT0;A0A0A0MTB9;H0YAK8;P09455-2;P09455-3 RBP1 Retinol-binding protein 1 yes no 0 0 0 7.5 0.5 1 1 50.953 51.03 2 0.00030789 13964 20230619_1888_Aki_TMTPro18x_K_F8 144.12 64.653 340680 279850 304020 328990 282590 335010 391380 384260 457430 316640 341520 336800 329340 278030 372400 347070 376100 386910 314740 256630 311810 328410 298460 339390 390210 387390 457060 324420 355430 339150 338620 292460 377990 349960 359890 367030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1004199999.9999999 1500 3420 1431 2762;2763 2252 2252 1 9606 Homo sapiens 0.07473162680139467 ALDVSASDDEIAR Unmodified 1360.647 0.64703797 2754 C9JIF9;P13798;H7C393;H7C1U0;C9JLK2 APEH Acylamino-acid-releasing enzyme yes no 0 0 0 1 0 1 47.037 47.037 2 2.5235E-46 13132 20230619_1880_Aki_TMTPro18x_K_F1 315.5 264.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1501 2754 1432 2764 2253 2253 1 9606 Homo sapiens -0.01885967066482408 ALDVTDKEGEEREDADVSVTQR Unmodified 2461.1569 0.15685417 1634 F8W7R3;B3KNW8;A0A6Q8PGF4;B7ZMF2;A0A6Q8PH09;Q9NVI1-2;Q9NVI1-1;Q9NVI1;H3BP78;A0A8Q3SIZ6;A0A8Q3SIW9 FANCI Fanconi anemia group I protein yes no 0 0 2 1.5 0.5 1 1 44.328 44.37 4 0.0084143 12064 20230619_1880_Aki_TMTPro18x_K_F1 63.165 55.362 14514 12195 14919 17826 16044 20589 12893 13768 17626 19374 14590 16179 18796 13831 15343 18047 14917 15978 13426 11209 15155 17558 16524 20442 13337 14687 17599 19187 15304 16476 18871 14578 15654 17945 14284 15194 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90927000 1502 1634 1433 2765;2766 2254 2254 1 9606 Homo sapiens -0.015277982218321995 ALDYCHSMGIMHR 2 Oxidation (M) 1621.68 0.67995155 1352 Q5U5J2;P68400;A0A2R8Y5A0;B2R6D7;E7EU96;Q2I0Y7;A0A2R8YD58;A0A2R8YFU2;B5BUH5;P68400-2;Q8NEV1;A0A2R8Y4D6;A0A2R8YDY7;A0A2R8Y4H0;V9GYW6 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 yes no 0 2 0 6 0 1 33.532 33.573 4 0.00061214 7097 20230619_1886_Aki_TMTPro18x_K_F6 86.288 78.917 15792 10705 17994 17597 23769 24171 24330 25262 25346 17914 20495 17415 18021 16313 15499 21047 22763 21383 14604 9862.1 18182 17286 24219 23958 24525 25523 25544 18493 21126 17692 18369 17112 16237 21075 21700 20312 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11602000 1503 1352 1434 2767 2255 2255 854;855 1 9606 Homo sapiens -0.10602122811292247 ALEAELAALR Unmodified 1055.5975 0.597509 3949 Q16352 INA Alpha-internexin yes yes 0 0 0 4.5 0.5 1 1 60.046 60.073 2 0.00038475 18365 20230619_1883_Aki_TMTPro18x_K_F4 128.38 78.257 291890 268350 293160 224520 23142 37574 66917 72598 65924 229210 239200 246680 227970 218030 248620 270460 259450 282240 270120 245300 293030 228420 46716 53386 65641 76267 74642 223450 236880 248580 234100 228520 253180 271540 248300 267860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79204000 1504 3949 1435 2768;2769 2256 2256 1 9606 Homo sapiens 0.07193414506014051 ALEAFETFK Unmodified 1054.5335 0.53351176 3775 V9HW89;Q00796;B4DKI2 HEL-S-95n;SORD Sorbitol dehydrogenase yes no 0 0 0 6.5 0.5 1 1 61.757 61.812 2;3 0.00066442 18929 20230619_1886_Aki_TMTPro18x_K_F6 141.48 93.632 126610 92183 113810 132520 98711 129750 127810 118720 128220 162100 177430 197650 197460 175290 145200 226380 210520 268890 116900 84756 116590 130410 104680 131080 127240 123280 132680 162530 180680 198310 198510 184270 152650 228760 201200 254730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62662000 1505 3775 1436 2770;2771 2257;2258 2257 2 9606 Homo sapiens 0.008426343491009902 ALEAFETFKK Unmodified 1182.6285 0.62847478 3775 V9HW89;Q00796;B4DKI2 HEL-S-95n;SORD Sorbitol dehydrogenase yes no 0 0 1 1.5 0.5 1 1 57.565 57.573 3 0.00013998 17639 20230619_1881_Aki_TMTPro18x_K_F2 126.19 90.314 108230 83179 114970 107380 101600 124480 115030 113480 113020 162300 189970 198330 187310 168990 152480 192100 198580 218070 100090 76369 115990 106690 107000 124290 115260 118000 118470 162400 191190 198680 189660 176480 158430 194010 189690 206780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 299710000 1506 3775 1437 2772;2773 2259 2259 1 9606 Homo sapiens 0.04446567820264136 ALEALVAK Unmodified 813.496 0.49600404 3450 V9HWI0;P14550 HEL-S-165mP;AKR1A1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 4.5 3.5 1 1 56.587 56.615 2;3 0.0016577 17095 20230619_1880_Aki_TMTPro18x_K_F1 124.08 55.658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1507 3450 1438 2774;2775 2260;2261 2260 2 9606 Homo sapiens 0.08179587874144545 ALEATTEHIR Unmodified 1139.5935 0.59348625 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 3.5 0.5 1 1 37.472 37.52 3 5.9216E-14 8563 20230619_1882_Aki_TMTPro18x_K_F3 218.94 164.53 41813 37624 38295 42806 47563 53956 51385 48088 54064 48533 53528 53819 52640 42771 46322 45825 60630 51657 38660 34480 39369 42951 48787 53583 51655 49549 54887 49194 54906 54008 53452 44661 47995 46335 57810 49036 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 250810000 1508 1292 1439 2776;2777 2262 2262 1 9606 Homo sapiens 0.029273250123196703 ALEAVFGK Unmodified 833.4647 0.46470391 3564 P38159;P38159-2;H3BT71;H0Y6E7;H3BR27;P38159-3;H3BNC1 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 0 0 0 5.33 3.09 1 1 1 59.631 59.658 2 0.0049663 18306 20230619_1880_Aki_TMTPro18x_K_F1 124.08 55.658 1092600 882240 925950 1004300 1008400 1170800 1062100 1068800 1141200 1200100 1139500 1102300 1299200 939300 756140 1299700 588910 1192900 1008900 808850 956230 1006500 1043200 1169000 1070400 1102300 1158900 1202700 1175200 1118200 1293400 994090 772570 1292600 569260 1131900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1303900000 1509 3564 1440 2778;2779;2780 2263;2264;2265 2263 3 9606 Homo sapiens 0.04131014840049829 ALECLPSK Unmodified 916.4688 0.46880301 1532 A0A3B3IUD7;Q14690 PDCD11 Protein RRP5 homolog yes no 0 0 0 7 0 1 48.747 48.834 2 0.019681 13055 20230619_1887_Aki_TMTPro18x_K_F7 83.005 38.87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1510 1532 1441 2781 2266 2266 1 9606 Homo sapiens 0.0072273627146159924 ALEDFADNIK Unmodified 1134.5557 0.55570376 934 Q63HP7;Q5G0E1;A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5 DKFZp686P1551;EXOC7 Exocyst complex component 7 yes no 0 0 0 4 0.707 1 2 1 59.438 59.467 2;3 0.055314 17639 20230619_1885_Aki_TMTPro18x_K_F5 45.158 29.568 23331 15803 26000 22737 21617 24260 24524 24427 27433 24612 25577 25473 26542 23238 28734 31579 26813 28378 21571 14535 26103 22416 22876 24413 24661 24950 27703 24895 26381 25763 27166 24477 29092 31413 25684 26982 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40870000 1511 934 1442 2782;2783;2784;2785 2267;2268 2268 2 9606 Homo sapiens -0.00619185973164349 ALEDFLASLR Unmodified 1133.6081 0.60807369 4288 Q8WXH0-2;Q8WXH0;D4YW74;G3V5X4 SYNE2;TROPH Nesprin-2 yes no 0 0 0 8 0 1 65.19 65.209 2 0.0091085 20022 20230619_1888_Aki_TMTPro18x_K_F8 83.278 58.943 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1512 4288 1443 2786 2269 2269 1 9606 Homo sapiens 0.04661397160452907 ALEDITASIAMAVIQQK Unmodified 1800.9655 0.96553533 3106 Q9HC39;Q9HBB9;I3L2C7;Q8WUM5;P57678 GEMIN4 Gem-associated protein 4 yes no 0 0 0 2 0 1 67.479 67.486 3 0.0020574 21788 20230619_1881_Aki_TMTPro18x_K_F2 68.972 57.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1513 3106 1444 2787 2270 2270 1 9606 Homo sapiens 0.09709118794603455 ALEDLAGFK Unmodified 962.5073 0.50729701 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 5.5 0.5 1 1 60.471 60.526 3 0.0032293 18361 20230619_1886_Aki_TMTPro18x_K_F6 82.563 37.925 71652 53445 60366 64541 41135 58560 60528 58019 69253 70786 82616 61441 79130 66185 70429 82910 70089 70782 66132 49041 62009 64200 44911 59636 60205 59673 70558 70585 83828 63069 80433 68998 71824 82338 67069 67355 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60067000 1514 3588 1445 2788;2789 2271 2271 1 9606 Homo sapiens 0.02454365177618456 ALEEAGFK Unmodified 863.43888 0.43888309 4021 Q59EF6;B4E1R7;B2RCM3;P17655;B4DN77;P17655-2;B3KUH9 CAPN2 Calpain-2 catalytic subunit yes no 0 0 0 4.5 0.5 1 1 49.815 49.871 2 0.0073433 13920 20230619_1883_Aki_TMTPro18x_K_F4 107.9 33.594 313480 251220 297000 324480 325440 386970 407320 331940 510400 427130 459780 474880 475930 413870 383480 490370 525650 481840 289710 230610 303780 322400 338360 385220 408790 345680 511790 428330 474800 477830 481060 432880 399990 490780 501260 457910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 278160000 1515 4021 1446 2790;2791 2272 2272 1 9606 Homo sapiens 0.0017012059777243849 ALEEAMEQK Unmodified 1047.4907 0.49066067 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q2PS10 MYH9 Myosin-9 yes no 0 0 0 2.5 0.5 1 1 51.243 51.301 3 0.00068156 15018 20230619_1881_Aki_TMTPro18x_K_F2 106.68 85.781 189170 167810 184350 183260 222700 237660 236650 212300 249910 235380 245680 214990 230120 162160 239560 216370 205690 175910 174980 153740 188260 184590 228580 235700 238130 219260 253660 236040 251440 217450 235510 171990 241430 214410 196920 167620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 446800000 1516 148 1447 2792;2793 2273;2274 2273 2 9606 Homo sapiens -0.031185037706336516 ALEEELAGLK Unmodified 1071.5812 0.58119023 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72;B3KM27 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 4 0 1 60.97 60.973 3 0.0004428 18717 20230619_1883_Aki_TMTPro18x_K_F4 107.21 72.318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1517 128 1448 2794 2275 2275 1 9606 Homo sapiens 0.0482628854927043 ALEEGLTPQEICDK Unmodified 1601.7607 0.76068752 2037 A8K492;P56192;B4DF61;B4E0E9;P56192-2;H0YHV5;A0A024RBA2 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 0 0 3 0 1 54.645 54.692 3 1.4594E-08 16223 20230619_1882_Aki_TMTPro18x_K_F3 138.87 117.41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1518 2037 1449 2795 2276 2276 1 9606 Homo sapiens -0.016122400157428274 ALEENNNFSK Unmodified 1164.5411 0.54111633 2878 E5RGX5;Q93045;B7Z4N6;Q93045-2 STMN2 Stathmin;Stathmin-2 yes no 0 0 0 3.5 0.806 1 4 4 1 44.458 44.52 2;3 4.8989E-19 11883 20230619_1882_Aki_TMTPro18x_K_F3 246.59 0 1456200 1049400 1340600 1392900 1345500 1366200 1296800 1314300 1630400 1617000 1997300 1908800 1897400 1672200 1630800 1435400 2114100 1842000 1344600 964030 1371400 1378000 1395800 1382700 1321500 1354800 1656300 1627000 2026500 1915800 1927500 1720400 1688400 1470000 2016200 1746200 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 9707400000 1519 2878 1450 2796;2797;2798;2799;2800;2801;2802;2803;2804;2805 2277;2278;2279;2280;2281;2282 2279 6 9606 Homo sapiens -0.034572581212842124 ALEEPGPAADPTAFQGPWAR Unmodified 2080.0014 0.0014035686 4200 Q86Y56;Q86Y56-2 DNAAF5 Dynein assembly factor 5, axonemal yes no 0 0 0 5 0 1 60.777 60.827 3 2.717E-11 18251 20230619_1885_Aki_TMTPro18x_K_F5 128.94 117.66 19988 20119 21414 21510 19821 23407 23363 22849 26635 21719 23356 22660 26377 20642 29712 26363 25912 28012 18520 18421 21614 21645 20819 23517 23454 23354 26804 22049 24259 22908 26968 21674 29927 26502 24844 26580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27794000 1520 4200 1451 2806 2283 2283 1 9606 Homo sapiens 0.004602922958383715 ALEEQNELLSAELGGLR Unmodified 1840.9531 0.95305639 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 3 0 1 62.457 62.487 2 1.2578E-84 19427 20230619_1882_Aki_TMTPro18x_K_F3 393.37 337.11 35062 27749 34566 29862 32131 35902 49021 46473 58263 56658 47919 43050 60384 43984 45456 61874 50778 54122 32411 25430 35105 30103 34028 36095 48705 46990 58439 56302 50151 44383 60480 46325 46872 61404 48556 51475 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13005000 1521 2830 1452 2807 2284 2284 1 9606 Homo sapiens 0.06621798655964994 ALEESESSQLISPPLAQAIR Unmodified 2138.1219 0.12191263 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 5 0 1 60.955 61.005 3 5.3289E-16 18329 20230619_1885_Aki_TMTPro18x_K_F5 149.52 138.48 29408 27615 28739 33823 28077 43429 37642 47027 51588 42837 40690 56480 60657 50850 49897 53392 48525 64175 27213 25322 29293 33774 29594 43227 37836 47645 51325 43942 43240 56484 60756 52785 50875 54208 46550 60782 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237230000 1522 3578 1453 2808 2285 2285 1 9606 Homo sapiens 0.09837655498859021 ALEESNYELEGK Unmodified 1380.6409 0.64088996 1272 P13645;CON__P13645;A0A1B0GVI3;CON__P02535-1 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 3 0.816 1 1 1 50.356 50.408 3 3.1517E-06 14655 20230619_1881_Aki_TMTPro18x_K_F2 142.89 129.89 + 28790 24554 47715 49613 849700 53457 63412 44808 78676 24128 39800 47003 28423 191470 45398 28406 34996 43295 26773 22668 57602 48041 791090 56036 109810 45911 78754 26530 42263 51530 31320 183360 45201 32196 33642 40933 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 551420000 1523 1272 1454 2809;2810;2811 2286 2286 1 9606 Homo sapiens -0.03420485298033782 ALEFAPACHR Unmodified 1170.5604 0.56041199 1609;2515 B4DKK3;Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2;K7EIH8;K7ER44;K7EK03;K7EPP7 DNAJC7 DnaJ homolog subfamily C member 7 no no 0 0 0 6.5 0.5 1 1 41.087 41.168 3 9.3321E-09 9732 20230619_1887_Aki_TMTPro18x_K_F7 161.27 135.88 181480 144990 167320 184450 190550 218100 191210 186030 182120 174130 191410 180680 191950 167630 203640 176760 193480 190410 167680 133080 171610 183430 196140 217220 192510 191980 186430 176850 195980 182730 196450 173840 206160 178350 185200 180720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 283780000 1524 2515;1609 1455 2812;2813 2287;2288 2288 2 9606 Homo sapiens -0.018045803113864167 ALEHAFQLEHIMDLTR Oxidation (M) 1938.9622 0.96218129 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 0 6 0 1 53.944 54.021 4 5.0027E-08 15607 20230619_1886_Aki_TMTPro18x_K_F6 133.62 116.11 46850 41666 47199 47682 43921 48377 44475 47719 58313 49544 51448 51589 53651 47133 53383 53367 56176 57842 43347 38188 47864 47687 45918 48864 45263 48844 58331 50056 53211 52133 54689 49098 54442 53782 53734 54885 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131660000 1525 3881 1456 2814 2289 2289 2545 1 9606 Homo sapiens 0.03025868740610349 ALEHFTDLYDIK Unmodified 1463.7296 0.72964538 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 6.4 1.02 1 2 1 1 59.734 59.783 3 2.4101E-13 18008 20230619_1886_Aki_TMTPro18x_K_F6 206.36 170.63 263110 207300 246980 307230 229200 309070 274000 293490 283780 373940 328150 407420 374100 321980 274370 408790 393200 544090 243110 190610 252400 301880 241130 311790 274130 303060 290840 374380 337040 408850 375740 339760 288110 416460 376110 514790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 263090000 1526 826 1457 2815;2816;2817;2818;2819 2290;2291;2292 2290 3 9606 Homo sapiens 0.016329747323197807 ALEHSALAINHK Unmodified 1302.7044 0.70443369 3468;701 P17812;A0A3B3IRI2;B4E1E0;A0A8Q3WKZ7;B4DMB5;P17812-2;A0A8Q3WL40;A0A3B3IRQ8;A0A3B3ITF6;A0A3B3ITB8;A0A3B3ISY3;Q9NRF8;A0A024RC00 CTPS1;CTPS2 CTP synthase 1;CTP synthase;CTP synthase 2 no no 0 0 0 7.5 0.5 1 1 40.006 40.033 4 1.6852000000000001E-31 9244 20230619_1887_Aki_TMTPro18x_K_F7 274.2 201.72 499870 391850 464850 487210 467190 512730 474470 460070 544180 545750 624540 608260 614390 532230 570740 635380 642620 625660 461830 359600 475240 484520 485430 515400 480330 476100 553640 548920 636420 612250 625370 556870 585460 636160 614050 594420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 755640000 1527 3468;701 1458 2820;2821 2293;2294 2293 2 9606 Homo sapiens 0.06518964720407894 ALEHVPNSVR Unmodified 1120.5989 0.59890598 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 0 5.5 0.5 1 1 36.128 36.204 3 0.0028497 8035 20230619_1886_Aki_TMTPro18x_K_F6 63.415 26.256 70231 46933 62260 61063 71363 89330 71677 75523 92073 77802 80786 86606 77563 69902 75272 92259 87839 80603 64806 43120 64051 60868 73553 87825 72885 78133 92161 78809 83316 86961 79204 73791 77369 91656 83872 76707 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209290000 1528 3337 1459 2822;2823 2295 2295 1 9606 Homo sapiens 0.04343048594796528 ALEIIPR Unmodified 810.49634 0.49633839 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 7 0.816 1 1 1 50.801 50.878 2 0.060911 14275 20230619_1886_Aki_TMTPro18x_K_F6 81.297 36.686 1100800 841030 911490 1107000 934720 1109800 1018200 1012500 1187800 1182600 1147400 1081100 1313200 1031700 1102700 1382200 1262400 1239900 1016000 772350 943230 1095700 972620 1119500 1027100 1045900 1199400 1183200 1185800 1101200 1324500 1084700 1135400 1374600 1206100 1179200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3055899999.9999995 1529 4005 1460 2824;2825;2826 2296;2297 2296 2 9606 Homo sapiens 0.08351007593989834 ALEIYQTK Unmodified 964.52295 0.52294707 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 0 7.5 0.5 1 1 50.499 50.58 2;3 0.0050791 13781 20230619_1888_Aki_TMTPro18x_K_F8 110.87 57.705 101820 87419 109350 116590 99500 114410 100450 110410 132320 122520 124750 134280 144710 110650 114710 149110 137300 139210 94236 80256 110340 115310 104230 115740 102290 113400 132720 123540 129250 134990 145570 116980 118610 148560 131160 132320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234600000 1530 3808 1461 2827;2828 2298;2299 2299 2 9606 Homo sapiens 0.03926651694666816 ALELDHK Unmodified 824.43922 0.43921744 1609 Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2;K7EIH8;K7ER44;K7EK03;K7EPP7;K7ESP1;K7ELJ8;K7EJV7;K7EN19;K7EJL5;K7EJE9 DNAJC7 DnaJ homolog subfamily C member 7 yes no 0 0 0 3.5 0.5 1 1 41.226 41.277 3 0.003853 10105 20230619_1883_Aki_TMTPro18x_K_F4 121.99 32.439 445090 358100 484470 478850 583310 555110 499740 508740 650060 569320 615270 591800 638100 480440 430020 547380 715690 570820 411820 328850 490150 474630 595260 554670 513480 524510 652300 572980 633380 595940 640490 503130 457260 550000 681000 542450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 546640000 1531 1609 1462 2829;2830 2300 2300 1 9606 Homo sapiens 0.019975403176204054 ALELDPDNETYK Unmodified 1406.6565 0.65654002 1650 A0A7I2V697;A0A7I2V4T9;A0A7I2V2U2;A0A7I2V5Z3;A0A7I2V588;O43765;B4DEA6 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 0 0 2.8 0.748 2 2 1 53.712 53.748 2;3 3.244E-07 15837 20230619_1882_Aki_TMTPro18x_K_F3 196.11 165.55 237810 196490 214960 231920 172450 231150 226370 197150 251650 318350 290080 306730 331460 256670 262540 378210 325780 341330 219740 180190 219780 231300 184330 232990 225930 207120 256820 314800 297680 310200 333570 272920 272320 375680 311200 324530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 366480000 1532 1650 1463 2831;2832;2833;2834;2835 2301;2302 2302 2 9606 Homo sapiens -0.030521987809379425 ALELDPNLYR Unmodified 1202.6295 0.62953741 3549;1719 A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH11;MYH10 Myosin-11;Myosin-10 no no 0 0 0 5 0 1 56.276 56.337 2 0.01521 16401 20230619_1885_Aki_TMTPro18x_K_F5 72.23 49.449 84349 67779 83986 88901 76177 91681 80755 87478 94764 99019 98705 98513 104440 93289 100010 105270 103760 118680 77984 62229 85258 88073 79946 92376 81652 89959 95951 99437 101350 99856 106220 97047 102020 106330 99340 112530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127460000 1533 1719;3549 1464 2836 2303 2303 1 9606 Homo sapiens 0.036327821891973144 ALELDSNLYR Unmodified 1192.6088 0.60880197 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1 MYH9 Myosin-9 yes no 0 0 0 4.33 0.471 2 1 53.118 53.164 2;3 5.6593E-19 15119 20230619_1885_Aki_TMTPro18x_K_F5 243.38 191.53 403900 344240 341800 368290 366970 427720 445480 430390 491130 576600 518040 523270 605820 471370 502760 631960 556080 604250 373100 315360 353000 370910 381620 428160 445960 443300 499410 573120 534080 531880 610340 496680 516730 630520 531870 574030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 597310000 1534 148 1465 2837;2838;2839 2304;2305;2306 2306 3 9606 Homo sapiens 0.02020191809538119 ALELDSNNEK Unmodified 1131.5408 0.54078198 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 2.5 0.5 1 1 46.019 46.098 2 8.3839E-10 12633 20230619_1881_Aki_TMTPro18x_K_F2 240.38 201.36 270990 196080 289190 280720 282330 312420 284540 267600 353390 363380 427180 415490 422940 341790 330930 359530 498510 435680 250540 180280 292070 276890 293920 312440 289020 279140 359050 363730 434390 416840 427420 356110 347490 365200 474920 413240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 405380000 1535 3789 1466 2840;2841 2307;2308 2307 2 9606 Homo sapiens -0.019726778411495616 ALELENDRLLLK Unmodified 1425.8191 0.81912909 1473 Q03252;A0A384NPH0 LMNB2 Lamin-B2 yes no 0 0 1 7 0 1 56.368 56.426 3 8.3584E-05 16339 20230619_1887_Aki_TMTPro18x_K_F7 116.19 101.5 118470 141820 131090 111000 116730 100700 117030 132410 117950 135390 134670 103630 122860 91421 127740 139560 135950 112230 109960 129480 131720 114760 122110 103580 118160 133090 120870 135610 136680 106380 125910 97303 130320 137900 129830 106980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157800000 1536 1473 1467 2842 2309 2309 1 9606 Homo sapiens 0.12325229411703731 ALELTGLK Unmodified 843.50657 0.50656873 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;B3KM80;Q6ZS99;A0A7I2V2S8 NCL Nucleolin yes no 0 0 0 7.67 0.471 1 2 55.911 55.971 2;3 0.00094736 16167 20230619_1887_Aki_TMTPro18x_K_F7 163.77 61.055 328150 275250 309870 321250 328370 351340 355180 347830 414390 300530 312420 277560 315400 253210 353090 350550 336240 317100 303340 252380 316640 321140 340340 352980 358340 354340 414400 305780 325370 282320 323530 267200 357430 348850 321740 301610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11108000000 1537 1658 1468 2843;2844;2845 2310;2311 2310 2 9606 Homo sapiens 0.07855570528579392 ALEMCPSCFQK Unmodified 1369.5829 0.58286327 1739 A0A804HKC5;Q53GE7;Q99614;A0A804HHT7;A0A804HIB8;A0A804HKI4;Q53HD9 TTC1 Tetratricopeptide repeat protein 1 yes no 0 0 0 7.5 0.5 1 1 53.92 53.989 3 2.3176E-06 15275 20230619_1888_Aki_TMTPro18x_K_F8 125.75 109.4 57122 48367 55299 63589 57360 72899 66158 61137 71682 70286 61918 62091 75552 56696 60664 78532 72036 74674 52817 44399 56425 63062 59730 72708 66351 63529 72365 70312 64580 63238 75933 59858 62676 78292 68831 70957 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128100000 1538 1739 1469 2846;2847 2312 2312 1 9606 Homo sapiens -0.08714485020277607 ALENSNYGVR Unmodified 1121.5465 0.54653606 2725 B9EK47;Q9P2D3-3;Q9P2D3;Q9P2D3-2 HEATR5B HEAT repeat-containing protein 5B yes no 0 0 0 5 0 1 39.753 39.843 2 0.0015475 9439 20230619_1885_Aki_TMTPro18x_K_F5 105.52 85.737 96722 75552 91619 98349 98202 114830 108490 97171 117480 113800 123960 108620 109960 95483 111550 120840 133790 110520 89372 69368 93648 97638 101820 114440 109060 100970 119410 113990 126180 110120 112780 100250 114670 120430 127630 105170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19670000 1539 2725 1470 2848 2313 2313 1 9606 Homo sapiens -0.009375345388207279 ALENTAVK Unmodified 844.46543 0.46543219 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 5 0 1 42.026 42.111 2 0.0020587 10384 20230619_1885_Aki_TMTPro18x_K_F5 132.76 43.006 39227 20985 55605 45017 63911 80029 49818 57820 58659 36170 66578 71551 55142 56280 63120 28922 73057 63294 36319 19434 55188 43903 65396 77673 51379 59997 59456 38838 67484 70470 57085 57092 64392 31553 69737 59789 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17182000 1540 1552 1471 2849 2314 2314 1 9606 Homo sapiens 0.03697809489085557 ALENVLSGK Unmodified 929.5182 0.51819605 3262 O43678 NDUFA2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 0 0 0 8 0 1 54.578 54.645 2 5.5937E-05 15552 20230619_1888_Aki_TMTPro18x_K_F8 129.85 74.481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1541 3262 1472 2850 2315 2315 1 9606 Homo sapiens 0.05061767551910634 ALEPTGQSGEAVK Unmodified 1285.6514 0.65139506 1587 A0A5H1ZRP4;Q8WX92-2;Q8WX92 NELFB Negative elongation factor B yes no 0 0 0 4 0 1 43.125 43.169 3 9.1972E-05 10933 20230619_1883_Aki_TMTPro18x_K_F4 83.087 27.483 72824 61557 79876 77553 82979 90198 87788 80241 98151 79321 82364 88629 87139 71068 81464 78506 85743 84177 67406 56482 80588 77176 86046 90023 88546 82668 98734 80535 85509 88921 88499 74298 83154 79110 81986 79898 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62775000 1542 1587 1473 2851 2316 2316 1 9606 Homo sapiens 0.01999542147086686 ALEQQMESHR Unmodified 1227.5666 0.56661958 1036 O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;A0A7I2V581;Q57Z91;O60282-2;A0A7I2V352;A0A7I2YQQ7 KIF5C Kinesin heavy chain isoform 5C;Kinesin-like protein yes no 0 0 0 2.5 0.5 1 1 35.799 35.856 3 7.3561E-06 7912 20230619_1882_Aki_TMTPro18x_K_F3 133.91 116.69 73886 46414 70770 80002 86335 90600 82648 84399 83565 89780 79093 78561 84868 67585 78149 57555 93319 75250 68198 42802 72433 78108 88301 90629 83587 86781 84994 90085 81621 79802 86094 69617 80293 59069 89015 71352 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99482000 1543 1036 1474 2852;2853 2317 2317 1 9606 Homo sapiens -0.038061068705246726 ALEQQVEEMR Unmodified 1231.5867 0.58668632 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 0 2 0 1 47.82 47.891 2 9.267E-07 13464 20230619_1881_Aki_TMTPro18x_K_F2 140.49 124.82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1544 3549 1475 2854 2318 2318 1 9606 Homo sapiens -0.019843559305627423 ALERPYTSK Unmodified 1063.5662 0.56620887 4582 Q9NR45;V9HW39 NANS;HEL-S-100 Sialic acid synthase yes no 0 0 1 4.5 3.5 1 1 38.177 38.17 3 0.0063524 9249 20230619_1880_Aki_TMTPro18x_K_F1 64.374 37.276 349140 289670 344880 398380 519440 535410 499830 519470 604240 480910 562520 588240 553840 459330 496010 567960 655800 573180 322840 266060 353680 395020 525020 530580 508150 530590 607590 491500 578840 588020 562900 483770 514570 569110 625350 544660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 545530000 1545 4582 1476 2855;2856 2319;2320 2319 2 9606 Homo sapiens 0.036968414719467546 ALESDMAPVLIMATNR Oxidation (M) 1746.8644 0.86444108 4699 Q9Y230;B3KNL2;Q9Y230-2;M0R0Y3 RUVBL2 RuvB-like 2 yes no 0 1 0 6 0 1 58.142 58.211 3 0.0010324 17370 20230619_1886_Aki_TMTPro18x_K_F6 76.341 62.377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1546 4699 1477 2857 2321 2321 2862 1 9606 Homo sapiens 0.020883438202645266 ALESDMAPVLIMATNR Unmodified 1730.8695 0.86952646 4699 Q9Y230;B3KNL2;Q9Y230-2;M0R0Y3 RUVBL2 RuvB-like 2 yes no 0 0 0 7.5 0.5 1 1 63.071 63.099 3 3.4975E-11 19218 20230619_1887_Aki_TMTPro18x_K_F7 156.57 136.73 187420 137250 154960 170110 137400 158960 169850 164220 197960 194670 199360 190520 205620 195240 189790 230400 198980 235940 172940 125990 159940 168960 145150 161710 170260 168260 200130 195020 204690 193850 209040 203040 194020 231150 190550 223900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 441170000 1547 4699 1477 2858;2859 2322 2322 1 9606 Homo sapiens 0.03332647682896095 ALESGDVNTVWK Unmodified 1317.6565 0.65648044 707 P46940;A4QPB0;A0A024RC65;A0A0J9YXZ5;Q6P1N4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 5.5 0.5 1 1 54.577 54.649 3 1.77E-05 15705 20230619_1885_Aki_TMTPro18x_K_F5 126.76 88.131 65508 49260 62901 57094 55396 70071 65892 70662 72912 70337 81470 74970 79753 70136 76605 81288 81403 77896 60523 45182 63976 57220 58495 69866 66088 72109 74197 71244 83072 75785 81313 73078 78242 81314 77815 74035 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 355180000 1548 707 1478 2860;2861 2323 2323 1 9606 Homo sapiens 0.010358460096995259 ALESPERPFLAILGGAK Unmodified 1767.9883 0.98831969 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DWQ3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 1 2.5 0.5 1 1 62.011 62.03 3 1.5181E-18 19224 20230619_1882_Aki_TMTPro18x_K_F3 185.33 108.25 2871400 2400700 2544300 3018500 2453000 2833200 2721900 2809800 2806400 3566500 3535500 3505000 2176000 4637800 1857500 5211300 1835900 4179500 2652900 2202900 2613300 2994700 2563900 2878500 2733100 2892700 2885400 3562400 3532400 3602900 2267500 4762400 1913700 5160300 1773000 3972000 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 9784500000 1549 3374 1479 2862;2863 2324;2325;2326;2327 2327 4 9606 Homo sapiens 0.1350450597442432 ALESSIAPIVIFASNR Unmodified 1686.9305 0.93047046 1442 B5BUB1;A0A384MTR5;Q9Y265;Q9Y265-2;E7ETR0;B3KRS7;H7C4G5;J3QLR1;H7C4I3 RUVBL1 RuvB-like 1 yes no 0 0 0 3.5 0.5 2 2 64.064 64.083 2;3 6.2085E-26 20148 20230619_1882_Aki_TMTPro18x_K_F3 297.18 251.46 73068 61096 62057 79947 66657 71532 73438 81615 77417 78719 76444 76984 76010 74613 85231 85442 86870 92957 67489 56084 64130 79061 69061 73201 73803 82598 78633 79639 78498 78167 78102 77591 86601 86110 83143 88189 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 322060000 1550 1442 1480 2864;2865;2866;2867 2328;2329 2328 2 9606 Homo sapiens 0.11448244048983724 ALETHTYFER Unmodified 1265.6041 0.60405094 2793 CON__Q1RMK2 yes yes 0 0 0 4 0 1 41.398 41.441 3 0.00012773 10192 20230619_1883_Aki_TMTPro18x_K_F4 117.02 85.736 + 51485 35378 49563 54972 80061 70525 58502 66156 86859 45089 57402 58778 50021 44118 60381 40221 63706 54465 47545 32566 50971 54076 80088 70047 61098 67301 85577 47188 59981 58543 51808 45791 61282 41350 60858 51614 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43960000 1551 2793 1481 2868 2330 2330 1 -0.01812692333260202 ALEVIKPAHILQEK Unmodified 1587.9348 0.93482755 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 1.5 0.5 1 1 52.478 52.494 4 7.7983E-09 15506 20230619_1881_Aki_TMTPro18x_K_F2 165.02 137.37 120920 101640 121290 129810 114490 127410 131510 139080 133310 155050 147530 110120 144250 108730 148410 126150 104250 87210 111830 93273 123130 128770 119900 129280 131740 141660 136390 154410 150330 113860 147340 113180 148270 124430 100050 83308 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2110199999.9999998 1552 3152 1483 2869;2870 2331 2331 1 9606 Homo sapiens 0.16437753262539445 ALEVSEDVK Unmodified 988.50769 0.50769094 599 Q9UNF1;A0A024R9Y7;B4DX55;B4DNG7 MAGED2 Melanoma-associated antigen D2 yes no 0 0 0 3 0 1 48.003 48.082 2 0.00051968 13280 20230619_1882_Aki_TMTPro18x_K_F3 143.86 80.375 69472 45962 56269 66908 67228 70296 72362 62881 85532 71597 98365 95131 83330 92429 90705 99532 107380 112950 64061 42283 58486 65853 69118 70650 73046 65040 86797 72663 99654 95479 86038 95712 93079 100630 102620 107120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97704000 1553 599 1484 2871 2332 2332 1 9606 Homo sapiens 0.012977401068155814 ALEYFTCALQHR Unmodified 1507.7242 0.72418285 1819 Q6PGP7;A0A8V8TMA8;A0A8V8TMB2;A0A8V8TLS3;A0A8V8TLT2;A0A8V8TLU2;A0A8V8TLT7;A0A8V8TLU5;A0A8V8TNK4;A0A8V8TN92;A0A8V8TLR0 TTC37 Tetratricopeptide repeat protein 37 yes no 0 0 0 3 0 1 59.246 59.275 3 7.3478E-18 18115 20230619_1882_Aki_TMTPro18x_K_F3 183.99 166.76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1554 1819 1485 2872 2333 2333 1 9606 Homo sapiens -0.009370273311333221 ALEYIENLR Unmodified 1119.5924 0.59242362 3446 P13521;B4DQJ6;C9JQI2;C9JDT0 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 6 0 1 60.217 60.274 2 0.00081426 18203 20230619_1886_Aki_TMTPro18x_K_F6 122.44 103.65 110020 99372 104980 134990 55393 64836 140570 130440 139330 143570 158140 153310 154500 146540 145820 149450 159860 161420 101760 91232 106540 132500 63724 72375 136740 129190 142660 144620 161200 154980 157480 151480 149230 150820 152830 153190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207410000 1555 3446 1486 2873 2334 2334 1 9606 Homo sapiens 0.03741110643431966 ALEYTIYNQELNETR Unmodified 1855.8952 0.89520716 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 4 0.816 1 1 1 56.833 56.867 3 3.0557E-08 17172 20230619_1882_Aki_TMTPro18x_K_F3 141 127.04 34048 28258 26886 28926 29821 41390 33059 32830 50732 22288 19743 19103 21128 16306 27625 22489 22745 22150 31431 25880 27976 29327 30951 40697 33659 33842 49358 23061 21783 19457 21830 17251 27678 22497 21805 21044 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 243000000 1556 4191 1487 2874;2875;2876 2335 2335 1 9606 Homo sapiens 0.0014953673048694327 ALEYVEAK Unmodified 921.48075 0.48074791 1532 A0A3B3IUD7;Q14690 PDCD11 Protein RRP5 homolog yes no 0 0 0 4 0 1 51.267 51.294 2 0.010843 14574 20230619_1883_Aki_TMTPro18x_K_F4 101.43 54.744 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1557 1532 1488 2877 2336 2336 1 9606 Homo sapiens 0.01686676286283273 ALFAVPK Unmodified 744.45341 0.45341094 416 B2R6U8;A0A024R6W2;O43809;H3BND3 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 0 3.5 0.5 2 2 55.238 55.264 2;3 0.035672 16488 20230619_1882_Aki_TMTPro18x_K_F3 99.511 68.792 979370 797040 902390 993480 798780 1100500 1061600 994520 1077400 990150 879340 837130 959590 764220 936570 1106800 1069700 1010400 904980 731360 922440 988450 846650 1101700 1055500 1023400 1088800 996480 915040 854860 975680 809130 961030 1100800 1021800 960890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 499410000 1558 416 1489 2878;2879;2880;2881 2337;2338 2337 2 9606 Homo sapiens 0.07096237536563876 ALFDSYTNLER Unmodified 1327.6408 0.64083038 993 A0A0C4DG21;F8WAL6;Q9NYB9-2;Q9NYB9;E7EW77;Q9NYB9-4;A0A7D9NKC8;E7EP65;E9PEZ7;Q53RS4;F8WBL5;A0A0A0MQU9;F8WEB9;F8WAU3;B7Z9N5;F8WCD7;F8WAZ8;E7EUA1 ABI2;ABI-2 Abl interactor 2 yes no 0 0 0 6 0 1 56.936 57.008 2 7.4913E-23 16869 20230619_1886_Aki_TMTPro18x_K_F6 250.06 221.27 61765 52505 67409 70264 52732 62304 64151 67582 72719 79520 85713 94595 91949 79571 78083 93049 94070 103510 57170 48206 67804 69398 56263 63713 64340 69014 74141 80156 87653 94815 93002 83289 80612 93830 89917 98169 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236060000 1559 993 1490 2882 2339 2339 1 9606 Homo sapiens -0.009884405073762537 ALFEEVPELLTEAEK Unmodified 1716.8822 0.88218286 3534;2560 B4DP06;H7C1S2;V9HWH7;P31939;B2R7P8;P31939-2 ATIC;HEL-S-70p Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 0 3.5 1.71 1 1 1 1 1 1 65.352 65.375 3 1.3704E-10 20678 20230619_1882_Aki_TMTPro18x_K_F3 152.99 132.87 34074 23717 29363 35856 22273 31586 27395 32384 36783 40166 40547 52993 50551 49855 35076 67532 61375 80416 31442 21824 30156 35137 23920 32253 27644 33242 37117 40563 41927 53115 50620 52448 37578 68184 58600 76173 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105550000 1560 2560;3534 1491 2883;2884;2885;2886;2887;2888 2340;2341 2341 2 9606 Homo sapiens 0.05241705618436754 ALFGTDGIR Unmodified 948.50288 0.50288033 551 E9PNU1;Q59GR0;B4DXC8;A0A024R8Z7;Q9Y5B8-2;Q9Y5B8 NME7 Nucleoside diphosphate kinase 7 yes no 0 0 0 7 0 1 50.98 51.058 2 0.0058579 14089 20230619_1887_Aki_TMTPro18x_K_F7 92.653 68.796 92218 77238 90478 97815 102920 115750 105680 106910 133840 117030 115090 119290 125370 102840 111630 134950 132340 130520 85271 70876 92293 97315 106060 115470 107250 110090 134000 117840 119430 120460 126980 108340 115030 134780 126410 124020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78958000 1561 551 1492 2889 2342 2342 1 9606 Homo sapiens 0.02656900754709568 ALFLETEQLK Unmodified 1190.6547 0.65468953 3867 Q13740-2;F5GXJ9;Q13740;B3KNN9;B4DX43 ALCAM CD166 antigen yes no 0 0 0 6.5 0.5 1 1 61.1 61.148 3 4.5299E-07 18596 20230619_1886_Aki_TMTPro18x_K_F6 170.85 95.472 198980 164400 193710 217110 292110 340290 345780 334360 394160 331750 233610 245040 389840 250750 236000 458930 292220 321650 183960 150930 198980 216490 297220 334470 346660 341680 392620 332940 254030 253240 385190 269720 247040 449420 279250 306850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1217000000 1562 3867 1493 2890;2891 2343;2344 2343 2 9606 Homo sapiens 0.06698836991745338 ALFLETEQLKK Unmodified 1318.7497 0.74965254 3867 Q13740-2;F5GXJ9;Q13740;B3KNN9;B4DX43 ALCAM CD166 antigen yes no 0 0 1 1 0 1 56.449 56.449 3 2.8956E-06 17027 20230619_1880_Aki_TMTPro18x_K_F1 150.06 120.12 362340 349360 365560 424590 621610 519550 715110 676940 389920 670450 469810 377950 566410 315040 493550 498920 333940 294530 335440 320300 375360 424020 625540 522160 705230 680080 420570 667990 482160 394900 570070 337510 494370 487040 320780 282050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 241290000 1563 3867 1494 2892 2345 2345 1 9606 Homo sapiens 0.10302770462931221 ALFNHIDK Unmodified 956.50797 0.50796571 4522 Q9H6T3-3;Q9H6T3-2;Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes no 0 0 0 8 0 1 46.216 46.254 3 0.0024921 12025 20230619_1888_Aki_TMTPro18x_K_F8 103.55 62.098 89232 67077 90121 100650 94778 109820 105680 107030 115760 104720 97276 93188 102680 90767 99592 130600 101160 103860 82475 61695 91621 98961 98406 110230 106230 109470 116630 105630 100900 95136 104510 95768 101590 129010 96793 98925 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76502000 1564 4522 1495 2893 2346 2346 1 9606 Homo sapiens 0.02797204617331772 ALFPAFAGLSEAPDGGSSR Acetyl (Protein N-term) 1890.9112 0.91119158 4527 Q9H7Z3;G3V338 NRDE2 Protein NRDE2 homolog yes no 1 0 0 4.5 0.5 1 1 66.961 66.989 2 8.4905E-10 20962 20230619_1885_Aki_TMTPro18x_K_F5 110.25 98.52 3616.6 3196.3 1938.2 3949.4 3185.6 2993.2 1665.5 1738.7 4812.9 2985.9 4282.4 2585.1 2723.6 2732.7 4656.2 2647.6 3479.8 4218.4 3333 2931.7 2010.9 3909.3 3161.3 3073.5 1828.3 1799.5 4695.3 2946.1 4340.2 2613.7 2787 2807.6 4625 2670.3 3317.9 3987.3 2 2 1 2 1 2 1 1 2 2 2 1 1 1 2 1 1 2 10707000 1565 4527 1496 2894;2895 2347;2348 2348 2 9606 Homo sapiens 0.0013724296743475861 ALFPGDSEIDQLFR Unmodified 1606.7991 0.79912193 653 A0A024RB77;G3V5T9;P24941;A0A024RB10;P24941-2;E7ESI2;B4DDL9;A0A024R8R3;Q00526;K7EJ83 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 yes no 0 0 0 5 0 1 64.243 64.287 2 0.00016384 19877 20230619_1885_Aki_TMTPro18x_K_F5 136.94 114.3 37095 30673 33148 38448 35032 40419 38024 32846 40569 46939 40573 35334 42677 38080 38633 44870 38353 43062 34273 28146 34063 38202 36341 40550 38237 34471 41236 46338 41686 36497 43306 39553 39377 44864 36732 40902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43152000 1566 653 1497 2896 2349 2349 1 9606 Homo sapiens 0.019994336810668756 ALGDLISATK Unmodified 987.56006 0.56006086 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 4.5 3.5 1 1 58.968 58.989 2;3 4.028E-05 17362 20230619_1888_Aki_TMTPro18x_K_F8 168.83 86.541 168910 143030 164440 170330 170790 188530 187640 184240 212140 214310 217630 224550 231970 197550 213050 236150 230550 245260 156190 131160 167550 170040 177370 189190 189000 189320 215020 215290 223710 226570 235410 206730 218080 237130 220520 232800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 96007000 1567 1292 1498 2897;2898 2350;2351 2351 2 9606 Homo sapiens 0.06578323240432837 ALGDQILFVNRPDK Unmodified 1584.8624 0.86239089 3520 P29084;E5RH41 GTF2E2 Transcription initiation factor IIE subunit beta yes no 0 0 1 1 0 1 54.726 54.726 3 1.3046E-08 16324 20230619_1880_Aki_TMTPro18x_K_F1 155.06 120.38 187560 151290 161440 188780 195830 217600 207820 206000 238020 216240 190990 199990 243790 189400 213660 266530 218020 251540 173210 138830 166870 187910 201110 217580 209720 211510 238990 217570 200560 203490 245610 199890 218340 265580 208790 238950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 250380000 1568 3520 1499 2899 2352 2352 1 9606 Homo sapiens 0.09335419188982996 ALGEEEEEPPR Unmodified 1254.5728 0.57281039 3118 M0QXZ5;I6L9C8;Q96B54 ZNF428 Zinc finger protein 428 yes no 0 0 0 1 0 1 38.667 38.667 2 0.00044247 9584 20230619_1880_Aki_TMTPro18x_K_F1 117.67 109.09 27645 17983 19553 28434 34460 37306 33713 29960 43452 30421 37879 33610 37976 30933 30325 39630 43792 39045 25468 16562 20818 27936 34623 36868 34300 31136 43443 30856 39089 33924 38400 32461 31763 39623 41736 37109 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31139000 1569 3118 1500 2900 2353 2353 1 9606 Homo sapiens -0.044293101580024086 ALGEPITLFGEGPAER Unmodified 1655.8519 0.85188578 2249 Q6IAP9;Q5T1M7;B2R7V4;Q59EL4;O43172-2;O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes no 0 0 0 5 0.816 1 1 1 61.873 61.908 3 4.5525E-08 19116 20230619_1883_Aki_TMTPro18x_K_F4 99.344 84.142 135510 110460 97733 107600 121050 127380 131330 122850 163830 146640 130280 138150 156910 138860 128070 137060 106080 168050 125010 101140 102830 109230 124260 127290 132740 126450 163760 146740 136450 140570 157930 143170 129600 139480 102140 159060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 556160000 1570 2249 1501 2901;2902;2903 2354 2354 1 9606 Homo sapiens 0.050193917439173674 ALGFPLERPK Unmodified 1126.6499 0.64987892 651 O75390;A0A024RB75;B4DJV2;B3KTN4;A0A0C4DGI3 CS Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 1 3 0 1 50.095 50.17 3 0.00034007 14165 20230619_1882_Aki_TMTPro18x_K_F3 115.7 84.996 865310 716070 849910 902290 866510 991610 996280 1037700 1160300 1123600 1012500 927050 1166600 927140 1125100 1145500 983670 1130500 800070 657090 865330 897180 902650 996860 1002100 1058800 1167400 1125100 1052100 950440 1183200 968490 1137100 1146800 943550 1073300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2886900000 1571 651 1502 2904 2355;2356 2355 2 9606 Homo sapiens 0.09161997639625952 ALGGEDVR Unmodified 815.41373 0.41373097 2780 CON__P12763 yes yes 0 0 0 2 0.816 1 1 1 35.734 35.772 2 0.00099915 7953 20230619_1881_Aki_TMTPro18x_K_F2 151.29 95.17 + 90366 148970 334790 117200 1718700 1715800 669670 807260 1541400 316070 952570 1695400 338290 579260 878840 215230 1111400 1434900 85959 135920 339060 141340 1647500 1592800 761750 872890 1492900 390110 983460 1617100 393150 614330 893360 292350 1063300 1348700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5641300000 1572 2780 1503 2905;2906;2907 2357 2357 1 9606 Homo sapiens -0.001359342048090184 ALGHQLGR Unmodified 850.47733 0.47733428 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;Q92862 DYNC1H1;Dnchc1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 1.5 0.5 1 1 31.845 31.877 2 0.032345 6737 20230619_1880_Aki_TMTPro18x_K_F1 77.984 55.055 22252 14743 21725 23488 25870 24265 22857 24586 31542 26815 35449 29817 29450 21933 26909 27707 39236 33230 20547 13578 22177 23001 26445 24486 23500 25152 31768 27076 35876 29888 30116 23212 28089 28055 37380 31526 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24476000 1573 3881 1504 2908;2909 2358 2358 1 9606 Homo sapiens 0.046114710229517186 ALGHSIQQR Unmodified 1008.5465 0.54647648 4344 Q96ER9;C9JSW8 CCDC51 Coiled-coil domain-containing protein 51 yes no 0 0 0 1 0 1 30.178 30.178 3 3.1989E-06 6071 20230619_1880_Aki_TMTPro18x_K_F1 169.09 130.67 18702 14596 16253 18927 23655 25975 21763 21417 31914 16312 20360 16675 17698 18215 19093 16870 22174 20036 17270 13401 16843 18841 23958 25622 22348 22056 31420 16813 21292 16984 18245 18659 19547 17161 21172 19005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8651500 1574 4344 1505 2910 2359 2359 1 9606 Homo sapiens 0.04254510251848842 ALGLDSANEK Unmodified 1016.5138 0.51383895 3853 Q53GX4;Q2TA84;Q13451;B7Z8G2;B7Z7Z8;Q6ZR21 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes no 0 0 0 3.5 0.5 2 2 46.084 46.145 2;3 1.2582E-05 12232 20230619_1883_Aki_TMTPro18x_K_F4 147.75 87.846 149190 124780 155230 175740 176120 181580 167540 154750 214570 201570 217860 204350 216450 183080 167410 219650 247940 223960 138020 114630 157600 173270 181010 182570 170870 161280 216060 201370 223130 206660 218700 191510 175810 220230 236280 212760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 338380000 1575 3853 1506 2911;2912;2913;2914 2360;2361 2361 2 9606 Homo sapiens 0.006242583383254896 ALGLDTGQQQDAQEFSK Unmodified 1834.8697 0.86972069 2708 B7ZKS3;Q86UV5;Q86UV5-8;B7ZKR8;Q86UV5-2;Q86UV5-7;Q86UV5-3;Q86UV5-4 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes no 0 0 0 4.5 0.5 1 1 53.206 53.251 3 2.4266E-13 15479 20230619_1883_Aki_TMTPro18x_K_F4 147.7 135.72 59149 43621 51540 59715 46149 54099 54965 59364 65334 60109 73319 70400 74963 54147 58894 71022 67866 63924 54602 40082 52959 58899 48656 55234 55261 60311 66252 61010 74877 70485 75623 57304 60732 70671 64819 60805 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91182000 1576 2708 1507 2915;2916 2362 2362 1 9606 Homo sapiens -0.014319377919036924 ALGLEESLVQEGR Unmodified 1399.7307 0.73070802 2915 E9PGC8;P78559;P78559-2 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 3 0 1 55.936 55.977 2 0.00024729 16717 20230619_1882_Aki_TMTPro18x_K_F3 107.79 74.947 134490 99950 127590 147490 122620 167320 151010 140570 170310 187910 165490 176700 204650 169910 168460 206530 188780 196420 124240 91917 130280 145200 128800 166940 151190 146740 172390 187050 171800 179610 205890 177450 173270 206280 180480 186640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166710000 1577 2915 1508 2917 2363 2363 1 9606 Homo sapiens 0.046831891012288906 ALGLFSNDIPHVVR Unmodified 1536.8413 0.84126152 962 A0A0A0MTB8;Q8NI36 WDR36 WD repeat-containing protein 36 yes no 0 0 0 2 0 1 58.421 58.435 3 4.5731000000000003E-29 17947 20230619_1881_Aki_TMTPro18x_K_F2 257.21 212.89 39904 31092 36536 38312 35787 43275 38271 42155 43198 50428 49635 45426 49440 43366 46775 50673 47379 53316 36861 28532 37396 38167 37341 43349 38623 43344 44025 50356 50587 46284 50341 45195 47669 50942 45367 50590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18337000 1578 962 1509 2918 2364 2364 1 9606 Homo sapiens 0.09431453880097251 ALGLVIR Unmodified 740.49086 0.49085908 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 3.5 0.5 1 1 52.06 52.105 2 0.014103 14981 20230619_1883_Aki_TMTPro18x_K_F4 113.07 23.615 215090 201890 217110 233190 230770 254150 249190 263880 280880 275110 284620 301640 288260 283310 297460 313920 304250 370350 199080 185020 220690 233260 239110 255670 251240 269160 284540 278240 292190 304390 294790 294380 302810 318080 291500 350920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176150000 1579 2863 1510 2919;2920 2365 2365 1 9606 Homo sapiens 0.11023328802173182 ALGNICYDSHEGR Unmodified 1490.6572 0.6572255 2366 B3KNU0;P52306-4;P52306;P52306-5;D6RHH8 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes no 0 0 0 3.5 0.5 1 1 40.625 40.675 3 3.3704E-28 9811 20230619_1883_Aki_TMTPro18x_K_F4 255.54 247.63 160040 98378 103070 101680 125950 132490 156300 141770 177440 123570 136450 126740 127410 113590 120240 111970 152090 137890 147320 90225 109790 102910 129940 131890 156360 143690 177720 126050 141470 128090 130070 117550 124090 114040 145110 130750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 333610000 1580 2366 1511 2921;2922 2366 2366 1 9606 Homo sapiens -0.06847682612919925 ALGQAASDNSGPEDAK Unmodified 1529.6958 0.69577907 1037 A0A0G2JN29;Q15155;A0A0G2JP90;Q9H049;H3BUC9 NOMO1;DKFZp547A1913 Nodal modulator 1 yes no 0 0 0 2.5 0.5 1 1 41.895 41.965 3 0.00063605 10487 20230619_1882_Aki_TMTPro18x_K_F3 73.208 60.648 82145 61635 86843 81176 99098 119860 108220 96532 103890 90728 104980 99645 105420 81204 92758 89371 102870 91830 75954 56607 88006 80868 102240 117680 108430 100080 106080 92308 107650 100140 106920 84841 95077 89842 98247 87235 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64042000 1581 1037 1512 2923;2924 2367 2367 1 9606 Homo sapiens -0.04788098497397186 ALGQNPTNAEVLK Unmodified 1353.7252 0.72522871 2989 F8W1R7;P60660-2;P60660;G3V1V0;B7Z6Z4;J3KND3;G8JLA2;F8VPF3;Q6IBG5;B4E368;A0A8Q3SIC5;A0A024RB31;P14649;F8W1I5 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B yes no 0 0 0 6.5 0.5 1 1 48.883 48.965 2 1.5313E-27 13096 20230619_1887_Aki_TMTPro18x_K_F7 252.21 161.58 143750 119210 136780 135540 157760 177260 173010 165360 192220 203620 187330 196260 211710 169250 185110 222990 206440 200040 132880 109280 139860 136130 162660 175830 174120 170730 194690 203500 193560 198640 213980 178340 190090 221830 197270 190270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 229200000 1582 2989 1513 2925;2926 2368;2369 2369 2 9606 Homo sapiens 0.06251510309402875 ALGTLVSHVTLR Unmodified 1265.7456 0.74557022 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 6 0 1 52.857 52.934 3 3.4192E-11 15168 20230619_1886_Aki_TMTPro18x_K_F6 193.62 131.62 24942 21842 25358 25691 25074 32806 25501 26369 32444 31363 27284 28341 27504 22701 26214 24584 29928 31010 23077 20026 25727 25722 26129 32476 25908 27509 32468 31344 28253 28690 28003 23721 26874 25040 28606 29381 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36399000 1583 2863 1514 2927 2370 2370 1 9606 Homo sapiens 0.123327257598703 ALGTPNNEVWPEVESLQDYK Unmodified 2288.0961 0.096091815 56 A0A024QZP7;Q5H9N4;P06493;A0A024QZJ8;P06493-2 CDC2;DKFZp686L20222;CDK1 Cyclin-dependent kinase 1 yes no 0 0 0 4 0.816 1 1 1 62.83 62.858 3 4.3858E-16 19523 20230619_1883_Aki_TMTPro18x_K_F4 153.14 138.05 76785 73263 78874 83430 76027 94803 86668 88142 90176 106130 100260 90214 111060 102680 85683 117640 105700 103150 71091 67129 79950 83585 79548 94841 86912 90966 92171 105810 102770 92787 111860 106260 88856 117090 100930 98139 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 446850000 1584 56 1515 2928;2929;2930 2371;2372 2371 2 9606 Homo sapiens 0.003567612564893352 ALGVTEDR Unmodified 859.43995 0.43994572 2831 D3DVQ1;O95202 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes no 0 0 0 2 0 1 37.529 37.589 2 0.0012678 8728 20230619_1881_Aki_TMTPro18x_K_F2 145.34 56.219 92044 58179 86041 105840 120920 127190 115240 121620 155820 106550 133920 123360 126970 111570 114210 96471 146920 133920 84944 53691 88549 103140 122720 126790 117740 124210 155380 109110 138030 124080 129260 114720 118060 99354 140160 126850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95669000 1585 2831 1516 2931 2373 2373 1 9606 Homo sapiens 0.00460334966658138 ALGYFAVVTGK Unmodified 1124.623 0.62299547 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YFD1;A0A2R8YD53;A0A2R8YGE5;A0A2R8Y4Q3 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 4 0 1 62.311 62.315 3 0.01925 19330 20230619_1883_Aki_TMTPro18x_K_F4 61.353 28.129 28017 25167 28366 28482 23475 23318 25584 25743 30844 24087 27567 25373 32221 25723 30008 27337 27817 29013 25925 23063 28705 28440 24813 24044 25851 26101 30973 24486 28630 25729 32616 26619 30417 27551 26644 27534 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14255000 1586 2865 1517 2932 2374 2374 1 9606 Homo sapiens 0.06566889028476908 ALHFVFK Unmodified 860.49086 0.49085908 2121 B4DX01;A8K8F0;Q9HC38-2;Q9HC38;I3L3Q4;Q9HC38-3;I3L1F4;I3NI27;I3NI24;I3L2C2;I3L277 GLOD4 Glyoxalase domain-containing protein 4 yes no 0 0 0 4 0 1 52.702 52.725 3 0.076497 15256 20230619_1883_Aki_TMTPro18x_K_F4 44.611 19.161 90243 80280 85644 84624 91098 117830 107330 106300 127900 97304 91399 86539 87300 59073 70620 110960 101690 95532 83456 73525 87494 85580 94796 116340 107870 109110 127590 98537 95256 87483 88391 64643 74044 109670 96953 90923 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23159000 1587 2121 1518 2933 2375 2375 1 9606 Homo sapiens 0.05503328802183205 ALHHGIDLEK Unmodified 1131.6037 0.60365701 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 38.785 38.872 4 0.00089764 9061 20230619_1886_Aki_TMTPro18x_K_F6 96.948 59.392 607720 155760 490420 574800 607000 593490 631910 586180 744180 717210 792050 792920 883690 684710 659090 904380 778860 827470 558630 146940 510140 545330 621750 597900 639000 603060 753730 720210 814120 798180 887880 721600 682150 900250 744390 786570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 531290000 1588 1207 1519 2934;2935 2376;2377 2377 2 9606 Homo sapiens 0.04311932737573443 ALHLLEEYR Unmodified 1142.6084 0.60840804 990 A0A0C4DFT3;A0A590UKA8;A0A590UJ18;Q12959-5;Q12959-3;A0A590UJD9;A0A590UJ68;Q12959-6;A0A590UJS9;A0A590UJC5;Q12959-7;Q12959-2;Q12959;A0A590UJR5;A0A590UJ08;Q12959-4;C9JUA9;A0A590UJ64;E7EQD7;A0A3G9CMW0;C9J110;C9JCP6;F2Z2L0;B4E2H8;A0A590UJE6;Q6PJH1;A0A590UJ95;A0A3G9CMV0;A8MUT6 DLG1 Disks large homolog 1 yes no 0 0 0 5.5 0.5 1 1 50.816 50.893 3 1.4746E-08 14244 20230619_1886_Aki_TMTPro18x_K_F6 177.36 107.54 39147 27206 36215 42049 40968 45385 45736 41821 48368 40076 45776 40763 47111 36627 39079 47530 42162 41833 36142 25041 37143 41261 42309 45539 45907 42942 48992 40636 47107 41252 47634 38502 40097 47247 40308 39795 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99727000 1589 990 1520 2936;2937 2378;2379 2379 2 9606 Homo sapiens 0.04280816880304883 ALHLVEDLR Unmodified 1064.5978 0.59784335 4194 Q86W92-4;Q86W92;F5H6Q7;F5H0E0;F5H495;A0A0A0MTP2;Q05CN4;G5EKE5;Q86W92-5;Q86W92-2 PPFIBP1;PPFIBP1-ALK Liprin-beta-1;Tyrosine-protein kinase receptor yes no 0 0 0 5 0 1 48.864 48.941 3 4.3334E-07 13292 20230619_1885_Aki_TMTPro18x_K_F5 142.04 102.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1590 4194 1521 2938 2380 2380 1 9606 Homo sapiens 0.06812834225866027 ALHNLAQQAPEFSATQVFPR Unmodified 2224.1389 0.1389001 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;B4DE53;I6L959;Q9BTW9-5;A0A804HIC0;A0A804HJU6;I3L439;I3L163;I3L0V3;I3L3H4;I3L4D2;I3L143;I3L131;A0A804HJ99;Q9BTW9-3 TBCD Tubulin-specific chaperone D yes no 0 0 0 3 0 1 56.202 56.238 3 1.4324E-11 16906 20230619_1882_Aki_TMTPro18x_K_F3 136.85 127 43212 30269 40740 41798 38057 55886 44228 37797 74400 22895 24633 20376 24763 18597 35310 27312 23308 20604 39902 27822 41575 41423 40086 54976 45113 39491 71917 23996 27607 20783 25768 19705 35013 26959 22398 19651 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27832000 1591 1722 1522 2939 2381 2381 1 9606 Homo sapiens 0.07579620895239714 ALHQLYYDPNIENK Unmodified 1716.8471 0.84713476 2014 Q6PKD4;A8K2A8;O94829 IPO13 Importin-13 yes no 0 0 0 6.5 0.5 1 1 50.422 50.501 3 0.0010021 13828 20230619_1887_Aki_TMTPro18x_K_F7 80.905 65.149 48934 40239 44339 42795 44378 42919 51141 44259 40671 53177 58538 51481 54430 44464 62124 58446 49813 53689 45214 36867 45409 43042 46201 43461 50861 45382 42780 53179 59023 52136 56008 46840 62341 58257 47806 51030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83144000 1592 2014 1523 2940;2941 2382 2382 1 9606 Homo sapiens 0.01738507601157835 ALHSLLLR Unmodified 921.57599 0.5759857 99 A0A024R0L6;Q15102;M0R1K3 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma yes no 0 0 0 5 0.816 1 1 1 45.577 45.647 3 2.3732E-05 11904 20230619_1885_Aki_TMTPro18x_K_F5 182.68 100.01 220640 154080 188360 206660 191190 200500 210330 207720 228560 196640 187820 166460 182860 167320 198440 213120 209780 181710 203580 141580 194160 204280 198880 203380 211530 211450 230140 198470 194330 170530 187650 174920 202220 211650 200410 173020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 441990000 1593 99 1524 2942;2943;2944 2383;2384;2385 2384 3 9606 Homo sapiens 0.11206074268011434 ALHTQLEMQAK Oxidation (M) 1284.6496 0.64962092 1791 Q14789-2;A0A8Q3SHP0;Q14789;Q14789-3;Q14789-4;A0A8J9C4H3;E7EU81;A0A8Q3WKE2;A0A8Q3SHI9;C9J8Q0;A0A8Q3SHH2;A0A8Q3WK92;A0A8Q3WKA7;H0Y867;A0A8Q3SHQ4;A0A8Q3WLC9;A0A8Q3SHQ5;H7C5I7;A0A8Q3SHM0;A0A8Q3SHH5;A0A8Q3SHQ9 GOLGB1 Golgin subfamily B member 1 yes no 0 1 0 6.5 0.5 1 1 38.361 38.435 3 0.034113 8903 20230619_1886_Aki_TMTPro18x_K_F6 46.955 32.393 23889 15854 25360 29058 33920 30712 28361 34807 36239 27826 40829 35681 36006 29102 30297 23347 36322 30498 22075 14629 25780 28262 34361 31017 29183 35074 36610 28738 41415 35652 36616 29944 31199 23985 34654 28913 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26893000 1594 1791 1525 2945;2946 2386 2386 1156 1 9606 Homo sapiens 0.018682098574799966 ALHVELPSQQR Unmodified 1276.6888 0.68878362 2048 Q6P1X0;Q53H09;A8K4P6;Q9P2Y5 UVRAG UV radiation resistance-associated gene protein yes no 0 0 0 7.5 0.5 1 1 41.941 41.975 3 0.0011646 10092 20230619_1887_Aki_TMTPro18x_K_F7 77.64 53.305 24179 17520 21927 24442 29485 25808 28866 28288 36598 23272 29631 26152 27177 23860 30364 27282 28602 27612 22325 16103 22584 24130 29974 26061 29366 28597 36515 23901 30606 26368 27972 24864 30706 27392 27377 26226 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24734000 1595 2048 1526 2947;2948 2387 2387 1 9606 Homo sapiens 0.061506782033802665 ALHVNNDR Unmodified 937.47298 0.47297719 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q53GM6 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 3.75 0.433 1 3 25.324 25.414 3 0.008675 4363 20230619_1883_Aki_TMTPro18x_K_F4 69.628 39.818 17457 10275 16644 22347 28285 27210 21922 27903 21952 15860 22100 27736 18051 21855 24267 15183 30473 24194 16107 9513.4 17180 21610 28254 27144 22485 28123 22348 17033 22544 27397 18900 22358 24855 15904 29053 22907 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5156300 1596 1863 1527 2949;2950;2951;2952 2388;2389;2390;2391 2390 4 9606 Homo sapiens 0.001739618093779427 ALIAAQYSGAQVR Unmodified 1346.7306 0.73064844 3510 Q53YD7;P26641;P26641-2;B4DUK7;B4DSR4;Q2F838 EEF1G Elongation factor 1-gamma yes no 0 0 0 3.5 0.5 1 1 48.298 48.358 3 7.6321E-16 13375 20230619_1882_Aki_TMTPro18x_K_F3 208.74 137.71 211710 162760 195050 218690 208080 203370 210870 196100 266570 162630 185690 163040 176780 156900 221360 219020 196440 173420 195560 149500 199810 216010 215100 206700 214110 200090 264830 166400 193890 165560 182900 165230 222910 216570 188040 165280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2358700000 1597 3510 1528 2953;2954 2392;2393 2392 2 9606 Homo sapiens 0.07115233891863681 ALIADSGLK Unmodified 886.51238 0.51238239 1360 Q9P2R7;Q9P2R7-2;A0A2R8Y6Y7;Q6N0B1;E5KS55;E5KS60;A0A2R8YDQ9;B4DRV2;B7ZAF6;Q7Z503;B4DY87;A0A0S2Z511;B7Z9S6;Q9Y4T0;A0A0U1RQL1 SUCLA2;DKFZp686D0880;DKFZp564P2062 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 7 0 1 51.805 51.879 2 0.00063371 14429 20230619_1887_Aki_TMTPro18x_K_F7 134.48 77.197 252810 253350 263870 253970 276640 267450 300400 294450 264480 328410 293570 222570 282930 197570 283090 273040 244610 197860 234180 231850 267230 256860 286470 270310 300490 299770 273010 326650 298970 230070 288720 208800 285670 269030 234090 188900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112620000 1598 1360 1529 2955 2394;2395 2395 2 9606 Homo sapiens 0.06458669040250697 ALIAGGGAPEIELALR Unmodified 1549.8828 0.88279198 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 7 0 1 62.089 62.125 2 2.4065E-19 18768 20230619_1887_Aki_TMTPro18x_K_F7 267.02 201.3 428270 382270 443400 486680 413760 498490 467250 461490 459490 552540 546640 507720 293670 410630 267210 554730 284230 585660 396350 350720 449020 483000 433720 502240 468010 476520 472220 551930 545270 514260 307530 433760 274930 555920 273870 554830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 581570000 1599 3622 1530 2956 2396 2396 1 9606 Homo sapiens 0.1298458984881563 ALIDQEVK Unmodified 914.5073 0.50729701 890 A0A087X1K9;E5RGR0;Q6IAQ1;B4DJV9;O75608-2;O75608;E5RJ48;B4DP64;E5RI35 LYPLA1 Acyl-protein thioesterase 1 yes no 0 0 0 4 0 1 48.318 48.358 2 0.0019643 13224 20230619_1883_Aki_TMTPro18x_K_F4 147.29 51.936 636500 514130 582510 617300 574150 644900 668200 625180 681460 774000 810270 798200 872150 708800 667850 903220 867950 761630 588090 471600 596340 615380 599660 649670 668810 644200 699070 774820 827700 806410 878330 744270 695020 895980 827780 725290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 745030000 1600 890 1531 2957 2397 2397 1 9606 Homo sapiens 0.04662365177625816 ALIDYENSNK Unmodified 1165.5615 0.56151742 4752 Q9Y5X3;Q53FH8;Q6P5V6;B7Z476;A0A087WUY5 SNX5 Sorting nexin-5 yes no 0 0 0 4.5 0.5 1 1 49.092 49.149 3 0.025849 13393 20230619_1885_Aki_TMTPro18x_K_F5 44.57 25.79 91204 82184 99618 84705 82781 105780 94973 84071 118030 85002 89304 88799 90967 75169 99885 96113 88823 96646 84451 75251 100160 85676 87770 104870 95764 87447 117690 86066 93078 89539 93198 79107 100790 96293 85147 91761 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 350710000 1601 4752 1532 2958;2959 2398 2398 1 9606 Homo sapiens -0.014640874614769928 ALIEHEMK Unmodified 969.49535 0.49535211 1166 Q5QPQ1;A0A140VJC9;O95372;Q5QPQ0;Q5QPQ3;Q5QPQ2 LYPLA2 Acyl-protein thioesterase 2 yes no 0 0 0 4.5 0.5 1 1 42.764 42.827 3 0.0010798 10771 20230619_1883_Aki_TMTPro18x_K_F4 118.26 87.694 104560 64499 99213 103660 95245 116920 110920 102140 126960 118570 135470 136170 140510 112430 122100 133080 146400 139550 96499 59428 101210 101580 99784 116800 111430 105850 128720 119510 138800 136640 142340 117880 125880 133740 139800 132510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253900000 1602 1166 1533 2960;2961 2399 2399 1 9606 Homo sapiens 0.009384251627807316 ALIEILATR Unmodified 998.61243 0.61243078 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 0 2.5 0.5 1 1 62.368 62.387 2 0.0024212 19419 20230619_1882_Aki_TMTPro18x_K_F3 106.6 35.376 830270 632000 651740 703340 661400 763120 669570 661940 795830 894360 955590 909820 936380 810870 849970 1029100 1000600 1045000 766030 579440 677290 705360 687400 765020 678860 689530 810430 891850 971680 919880 952340 851230 875160 1031000 956220 992240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 684450000 1603 1062;1064 1534 2962;2963 2400;2401 2401 2 9606 Homo sapiens 0.11306906374045411 ALIEMEK Unmodified 832.43644 0.43644025 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;H7C367;C9JYS8 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 4.5 1.12 1 1 1 1 51.769 51.83 2 0.0067807 14803 20230619_1883_Aki_TMTPro18x_K_F4 135.16 11.202 844370 727910 769480 811890 842770 1006900 933440 921530 1048800 1067600 1056100 1063400 1215300 1004800 973790 1285500 1218700 1161000 780450 667070 789410 815780 872870 1001500 939470 951070 1062700 1071200 1090000 1078100 1223800 1053200 1009700 1279500 1163300 1104300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1804499999.9999998 1604 1112 1535 2964;2965;2966;2967 2402;2403 2403 2 9606 Homo sapiens 0.01351948868443742 ALIERPSQNNIGIQTMECSLR Unmodified 2429.2155 0.21551222 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B7Z3E7;A8KA50 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 1 1 0 1 53.851 53.851 3 4.6116E-55 15951 20230619_1880_Aki_TMTPro18x_K_F1 276.68 248.47 31286 26328 32848 29580 28536 34703 34813 39362 34216 37581 32464 32318 40096 34200 40875 40934 33958 33737 28947 24132 33159 29698 30161 34805 34743 39814 34858 37903 33742 33123 40709 35566 41170 40630 32556 32121 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30882000 1605 1984 1536 2968 2404 2404 1 9606 Homo sapiens 0.058073083379440504 ALIHSACVK Unmodified 997.53789 0.53788563 1489 A0A384P5L2;Q08257;A6NP24;Q08257-3;C9JH92 CRYZ Quinone oxidoreductase yes no 0 0 0 2.5 0.5 1 1 40.124 40.187 3 3.8341E-05 9871 20230619_1881_Aki_TMTPro18x_K_F2 149.82 107.22 135690 98816 110490 108100 210420 273890 204070 210170 316810 66274 63779 79209 82838 70941 91652 78586 81511 63493 125190 90600 115940 110560 211090 262720 209240 215060 305480 75649 78305 79636 84491 73811 92399 78070 77963 60532 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104150000 1606 1489 1537 2969;2970 2405 2405 1 9606 Homo sapiens 0.03901820291014246 ALINADELASDVAGAEALLDR Unmodified 2126.0855 0.085527129 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 66.607 66.628 3 0.01907 21460 20230619_1881_Aki_TMTPro18x_K_F2 47.32 33.455 4277.5 4339.6 6209 2975.4 4871.1 6585.1 5161.3 5245.4 6392.5 5985.1 5981.1 7056.4 6225.6 6600 7315.6 7062.2 7202.9 7024.9 3976 3960.8 6108.1 3175.8 5179.6 6355.9 5229.7 5465.8 6426.7 6044.6 6177.2 7096.2 6407.4 6840.5 7412.1 7089.4 6891.5 6673.3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5534900 1607 1022;3868 1538 2971;2972 2406;2407 2406 2 9606 Homo sapiens 0.06752778602140097 ALIVDESCRR Unmodified 1217.6187 0.61865515 722 A0A1U9X8D3;A0A1U9X8D1;A0A1U9X8C7;A0A1U9X8C1;A0A0G2JHC2;A0A024RCJ8;Q6NYC8;Q6NYC8-3;Q6NYC8-4;A0A0G2JKF1 hCG_1821276;PPP1R18 Phostensin yes no 0 0 1 5 0 1 37.766 37.858 3 0.0019779 8626 20230619_1885_Aki_TMTPro18x_K_F5 87.895 63.04 61956 48113 59126 70009 79845 79060 77261 77469 94325 80927 81862 82221 88742 71984 74673 91506 86407 89352 57249 44231 60669 68985 81182 79222 78553 79339 94622 81668 84868 83084 89675 75639 76922 91472 82580 84879 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53722000 1608 722 1539 2973 2408 2408 1 9606 Homo sapiens 0.018550565432406074 ALIVEPSR Unmodified 883.51272 0.51271674 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 5.5 0.5 1 1 43.916 44.007 2 0.011898 11225 20230619_1886_Aki_TMTPro18x_K_F6 96.253 51.806 240190 170340 188130 235810 253600 267520 252670 247030 332730 259610 298740 330070 328780 252150 269310 324620 345800 335470 221510 156570 196710 233040 258380 267610 257180 254180 332860 263970 309560 329230 331680 266580 279410 325490 330050 318550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 473660000 1609 1661 1540 2974;2975 2409;2410 2410 2 9606 Homo sapiens 0.06630088760084618 ALIVLAHSER Unmodified 1107.64 0.64004252 2531 B4DLR8;Q53G81;P15559-3;P15559-2;P15559;Q3B792;H3BRK3 NQO1 NAD(P)H dehydrogenase [quinone] 1 yes no 0 0 0 4.5 3.5 1 1 45.404 45.418 3 5.9424E-15 11657 20230619_1888_Aki_TMTPro18x_K_F8 202.44 154.33 84965 57724 67049 88920 109150 140680 126320 121030 166840 70998 72254 65087 67515 54206 87518 67125 70099 60413 78345 53133 70433 87818 110770 137740 127430 123620 163570 74458 78372 66041 70016 56968 87564 66945 67171 57487 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 346420000 1610 2531 1541 2976;2977 2411;2412 2412 2 9606 Homo sapiens 0.09052809634272307 ALIVVPYAEGVIPDEAK Unmodified 1782.9768 0.97675195 3797 Q5T760;Q05519-2;Q05519;Q05BU6;Q6PJY9;Q6PKC9;Q6PJB9 SRSF11;SFRS11 Serine/arginine-rich splicing factor 11 yes no 0 0 0 6.5 0.5 1 1 63.23 63.271 3 6.5802E-10 19609 20230619_1886_Aki_TMTPro18x_K_F6 110.38 89.133 787820 589570 700670 743790 638180 884200 757530 749170 874560 864210 896650 876110 1007900 823100 882540 1025900 961330 1126100 727420 541230 718540 740200 672810 879860 760690 777780 885330 867830 923620 887440 1019000 861930 904830 1032700 920170 1067900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 671700000 1611 3797 1542 2978;2979 2413;2414;2415;2416 2414 4 9606 Homo sapiens 0.11658264160382714 ALIVVQQGMTPSAK Unmodified 1441.7963 0.79628516 2873 E5KT65;P19388;B4DJ89;A0A087WWX0;A0A087WVZ9;A0A0A0MQR7;A0A087WVN5 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes no 0 0 0 4 0 1 55.631 55.639 3 0.00097683 16514 20230619_1883_Aki_TMTPro18x_K_F4 63.185 52.034 274230 254790 251300 261170 290490 399190 311390 283700 448040 139270 129780 136880 128080 107400 213960 142190 137470 129470 253610 233260 257960 265060 300130 390390 316610 294000 435000 149160 148280 138180 134950 113590 211430 141860 132210 123140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94673000 1612 2873 1543 2980 2417 2417 1 9606 Homo sapiens 0.0930588702260593 ALKEPPRDR Unmodified 1080.604 0.60399136 3530 P30050;Q59FI9;P30050-2 RPL12 60S ribosomal protein L12 yes no 0 0 2 7.5 0.5 1 1 31.469 31.523 4 0.039314 6188 20230619_1888_Aki_TMTPro18x_K_F8 62.463 56.159 88858 97237 183650 136210 302390 126680 237410 147430 52609 108750 172270 76065 63300 60076 328410 48966 73488 68777 83063 89249 179960 134340 300540 129860 237380 148410 68994 110760 166310 78449 80355 61954 313670 51399 72744 65132 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58526000 1613 3530 1544 2981;2982 2418 2418 1 9606 Homo sapiens 0.06691352457414723 ALKPPPIK Unmodified 862.56402 0.56402403 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 1 4.5 0.5 1 1 45.394 45.455 3 0.023397 11891 20230619_1885_Aki_TMTPro18x_K_F5 73.931 33.499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1614 150 1545 2983;2984 2419;2420 2420 2 9606 Homo sapiens 0.12724457524791433 ALLAEGVILR Unmodified 1053.6546 0.65462995 3144 J3QLR8;Q9Y3D9 MRPS23 28S ribosomal protein S23, mitochondrial yes no 0 0 0 1 0 1 59.029 59.029 2 4.1766E-05 18102 20230619_1880_Aki_TMTPro18x_K_F1 149.19 92.011 182610 152830 174060 196460 185610 217250 214690 210360 230610 228780 215550 220450 238050 200290 229870 248610 238450 263390 168820 140260 177870 195060 192760 217900 215250 215880 233520 229980 222930 223500 241850 209880 234480 249820 228240 249920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 344310000 1615 3144 1546 2985 2421;2422 2422 2 9606 Homo sapiens 0.12994881782424272 ALLALCGGED Unmodified 1017.4801 0.48009598 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 0 3.5 0.5 1 1 62.261 62.278 2 0.00038477 19357 20230619_1882_Aki_TMTPro18x_K_F3 128.38 116.48 112920 98273 106570 120450 91156 132960 113300 103060 130190 132300 136330 154410 153470 136720 149280 165890 162150 184690 104400 90137 108670 119950 96787 132750 113490 108200 131950 132850 140490 155120 155950 143150 152680 167230 155170 175130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 558440000 1616 1062;1064 1547 2986;2987 2423 2423 1 9606 Homo sapiens -0.0279448642505713 ALLANALTSALR Unmodified 1212.719 0.71902112 595 D6RAA6;A6QKW0;A0A024R9W7;P57088 TMEM33;SHINC3 Transmembrane protein 33 yes no 0 0 0 7 0 1 62.792 62.827 3 0.0089736 19118 20230619_1887_Aki_TMTPro18x_K_F7 67.879 46.978 24471 27426 21086 17074 19400 29972 28096 28859 37693 21807 27719 23896 20513 24423 26822 34638 31559 32349 22654 25012 21669 18315 20609 29312 28108 29349 37377 22517 28576 24237 21529 25679 27471 34489 30155 30747 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 540050000 1617 595 1548 2988 2424 2424 1 9606 Homo sapiens 0.12117036868517062 ALLAPLVAPEAGEAEPGSQER Unmodified 2104.08 0.08004782 4492 Q9H0B6;Q9H0B6-2;A8MX29;E9PQ02;E9PP09;C9JHT2;E9PM83;E9PI24 KLC2 Kinesin light chain 2 yes no 0 0 0 4 0.816 1 1 1 60.512 60.528 3 4.7908E-12 18636 20230619_1882_Aki_TMTPro18x_K_F3 140.35 128.37 53120 50248 45150 50854 74136 133150 72742 66572 130770 31877 32334 37365 40381 34318 38982 37302 35584 41150 49106 45995 47079 52326 75225 126720 75065 71645 125690 34534 38182 37601 40939 35662 39468 37662 34118 39024 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48536000 1618 4492 1549 2989;2990;2991 2425;2426;2427 2425 3 9606 Homo sapiens 0.07217099810304717 ALLCYNR Acetyl (Protein N-term) 950.46439 0.46438634 228 A0A024R394;Q9UHD1;A0A024R3C3;Q9UHD1-2;E9PPQ5;E9PIZ4;E9PSD5;E9PL00;E9PIF7 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes no 1 0 0 6 0 1 52.049 52.126 2 0.0026027 14816 20230619_1886_Aki_TMTPro18x_K_F6 94.669 84.255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1619 228 1550 2992 2428 2428 1 9606 Homo sapiens -0.012827281514546485 ALLEEYNK Unmodified 978.50221 0.50221163 3320 O75935-3;O75935;X6RCK5 DCTN3 Dynactin subunit 3 yes no 0 0 0 4.5 0.5 2 2 51.223 51.274 2;3 0.0011416 14584 20230619_1883_Aki_TMTPro18x_K_F4 101.41 73.305 178490 143750 149620 165710 187500 213700 194290 191710 246150 197250 198750 211300 223030 193270 199360 243580 233190 243330 164810 131810 155080 166180 192150 211950 197020 197500 245850 199610 207290 213310 225820 202600 205250 243820 222860 231090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 239010000 1620 3320 1551 2993;2994;2995;2996 2429;2430 2429 2 9606 Homo sapiens 0.012100613149982564 ALLELQEYFGSLAA Unmodified 1523.7872 0.78716026 1079 A0A0S2Z3W7;Q9BY32;A0A0S2Z423;Q9BY32-3;Q9BY32-2 ITPA Inosine triphosphate pyrophosphatase yes no 0 0 0 7.5 0.5 1 1 69.453 69.473 2 0.04675 21869 20230619_1887_Aki_TMTPro18x_K_F7 73.721 48.062 1776.7 1430.3 1539.2 3989.4 880.91 1978.7 2495.2 1702.7 2656 2885.8 3580.7 1738.3 1331.3 1234 3108.4 2871.4 1657.5 2127.2 1640.9 1319.4 1579.8 3782.1 978.82 2140.5 2425 1684 2728.8 2818.2 3521.5 1752.2 1435.3 1313.6 3049 2817.8 1594.8 2014 1 1 1 2 1 2 2 1 2 2 2 1 1 1 2 2 1 1 8337700 1621 1079 1552 2997;2998 2431 2431 1 9606 Homo sapiens 0.04621816937901713 ALLELQLEPEELYQTFQR Unmodified 2219.1474 0.1473991 3447 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 0 0 6 1 1 1 65.4 65.427 3 7.662699999999999E-19 20279 20230619_1887_Aki_TMTPro18x_K_F7 182.61 170.69 17877 18562 23481 19707 22931 23282 24298 26614 25362 22568 24109 26116 28901 22524 25813 25256 26377 29099 16601 16992 23354 19878 23863 23359 24467 26838 25727 23128 25022 26229 29182 23511 26331 25554 25251 27587 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50490000 1622 3447 1553 2999;3000 2432;2433 2433 2 9606 Homo sapiens 0.08659130021305828 ALLEMAEEK Unmodified 1032.5161 0.51614714 3569 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 4 0 1 58.872 58.874 2 2.046E-10 17851 20230619_1883_Aki_TMTPro18x_K_F4 161.92 107.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1623 3569 1554 3001 2434 2434 1 9606 Homo sapiens 0.0011897075175966165 ALLEPELRPEDR Unmodified 1436.7623 0.7623425 3427 P0DPD7;P0DPD8 yes no 0 0 1 2.5 0.5 1 1 46.938 47.016 3 1.5133E-09 12773 20230619_1882_Aki_TMTPro18x_K_F3 134.21 104.66 248450 200580 224980 221140 197260 238180 231910 217150 273020 306400 261930 258590 302120 229760 255070 332530 284150 280000 229540 183840 230070 221960 208290 239120 233130 225690 275660 303400 270970 263730 304680 243490 262240 329330 271560 266520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 176560000 1624 3427 1555 3002;3003 2435;2436 2436 2 9606 Homo sapiens 0.0614318185519096 ALLEVLGR Unmodified 869.53345 0.53345218 2584 H3BPK3;B4DT01;Q16775-2;Q16775;H3BPQ4 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes no 0 0 0 1.5 0.5 1 1 59.829 59.835 2 0.036519 18577 20230619_1881_Aki_TMTPro18x_K_F2 74.255 38.637 79647 72274 78077 92395 61371 79688 83349 82476 92783 101370 89503 87281 104250 82088 88070 100890 102990 101720 73685 66309 79295 91475 65757 81584 83078 84597 93929 100990 92611 89063 105130 85895 90731 101090 98382 96609 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292620000 1625 2584 1556 3004;3005 2437 2437 1 9606 Homo sapiens 0.09346679139753178 ALLFIPR Unmodified 828.52216 0.52215921 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 0 6 1.41 1 1 1 1 1 59.19 59.232 2 0.016485 17541 20230619_1885_Aki_TMTPro18x_K_F5 109.88 26.652 1336800 1159500 1194000 1251700 1109100 1294300 1230800 1257800 1335800 1484900 1286200 1198400 1425600 1119600 973840 1906100 990060 1316700 1235400 1062200 1223800 1257600 1162900 1305100 1237700 1293400 1354400 1479500 1326900 1228400 1428400 1198800 1004600 1866900 949380 1255600 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 12190000000 1626 751 1557 3006;3007;3008;3009;3010 2438;2439;2440;2441;2442 2439 5 9606 Homo sapiens 0.10103901836271234 ALLFVPR Unmodified 814.50651 0.50650915 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 5.5 1.12 1 1 1 1 56.267 56.317 2 0.0073288 16574 20230619_1886_Aki_TMTPro18x_K_F6 126.05 0 1869100 1618800 1643800 1879800 1637600 1967700 1907500 1904700 2034000 2098900 1909600 1753100 2138800 1731300 1891100 2374800 1948400 1997800 1727200 1484100 1690100 1878300 1710500 1981600 1911700 1955400 2061200 2100300 1974200 1796000 2163200 1820900 1933200 2353600 1864000 1901300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 11211000000 1627 3177 1558 3011;3012;3013;3014 2443;2444;2445;2446 2445 4 9606 Homo sapiens 0.09183615319227556 ALLGSVK Unmodified 686.43268 0.4326755 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2;K7EP67;K7EJ74 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 3 0 1 49.332 49.41 2 0.017 13853 20230619_1882_Aki_TMTPro18x_K_F3 97.602 22.291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1628 2436 1559 3015 2447 2447 1 9606 Homo sapiens 0.07691647156900672 ALLGYADNQCK Unmodified 1251.5918 0.59177169 2121 B4DX01;A8K8F0;Q9HC38-2;Q9Y3E8;Q9HC38;I3L3Q4;B3KV49;B7Z403 GLOD4 Glyoxalase domain-containing protein 4 yes no 0 0 0 7.67 0.471 1 2 50.836 50.913 2;3 1.8671E-08 14015 20230619_1887_Aki_TMTPro18x_K_F7 196.88 173.45 88260 70054 73220 80554 72161 82163 79468 81627 85447 99026 104250 107920 106000 91601 100840 109350 113330 131100 81481 64236 75656 80527 75292 82965 79929 83897 87521 99381 106180 108590 107900 95995 103370 110790 108430 124230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 83966000 1629 2121 1560 3016;3017;3018 2448;2449;2450 2448 3 9606 Homo sapiens -0.02396052067956589 ALLHWACDR Unmodified 1140.5498 0.5498473 556 A0A2R8Y544;B2RAA8;A0A024R949;Q9BR61 ACBD6 Acyl-CoA-binding domain-containing protein 6 yes no 0 0 0 1 0 1 48.133 48.133 3 0.0092319 13629 20230619_1880_Aki_TMTPro18x_K_F1 70.1 53.074 13397 12795 13266 14724 13557 15299 17793 14440 18039 11894 10637 12147 11525 8995 12933 11374 13952 13214 12400 11725 13505 14721 14170 15409 17687 14757 18051 12175 11319 12207 11802 9515.6 13173 11499 13335 12534 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32837000 1630 556 1561 3019 2451 2451 1 9606 Homo sapiens -0.014805629658212638 ALLIHEK Unmodified 822.49634 0.49633839 3519 P29083;Q53F88 GTF2E1 General transcription factor IIE subunit 1 yes no 0 0 0 7.5 0.5 1 1 42.69 42.729 3 0.0026899 10597 20230619_1888_Aki_TMTPro18x_K_F8 119.21 37.253 260930 206230 240280 237260 281630 301450 292670 270540 353510 172960 170130 158730 172550 137950 200980 192370 190690 161600 241070 189110 246410 237960 289600 299280 296120 275950 348840 179980 183310 161270 177410 145870 203240 190760 182350 153920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118000000 1631 3519 1562 3020;3021 2452;2453 2453 2 9606 Homo sapiens 0.07799007593996521 ALLLLCGEDD Unmodified 1117.5325 0.53252548 3416 V9HWE0;P08758;D6RBL5;D6RBE9 HEL-S-7;ANXA5 Annexin;Annexin A5 yes no 0 0 0 2.5 1.12 1 1 1 1 64.95 64.963 2 9.5932E-05 20781 20230619_1881_Aki_TMTPro18x_K_F2 143.23 132.35 103740 95086 103570 114380 155070 181830 139230 138340 137700 175680 177420 177560 184850 160470 171540 197830 203680 227390 95998 87182 106100 114760 156620 177730 141260 145260 142180 175570 180510 179610 187830 168120 176590 199760 194730 215580 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 447480000 1632 3416 1563 3022;3023;3024;3025 2454;2455;2456;2457 2455 4 9606 Homo sapiens -0.021539480821274992 ALLLLLVGGVDQSPR Unmodified 1549.9192 0.91917749 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 5.5 0.5 1 1 66.328 66.371 3 1.2465E-07 20888 20230619_1886_Aki_TMTPro18x_K_F6 126.56 109.79 14127 10583 13557 12439 10627 13579 17694 12951 17741 17626 15597 18773 20545 17161 20011 20187 18143 19318 13051 9708.6 13775 12431 11470 13629 17419 13412 17991 17602 16350 18940 20782 17915 20255 20191 17385 18353 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35783000 1633 1091 1564 3026;3027 2458;2459 2459 2 9606 Homo sapiens 0.1662146674550513 ALLLLPVEQGFTFSGICR Unmodified 2020.0816 0.081568145 4056 Q5SY16 NOL9 Polynucleotide 5'-hydroxyl-kinase NOL9 yes yes 0 0 0 5 0 1 65.941 65.984 3 1.1803E-18 20557 20230619_1885_Aki_TMTPro18x_K_F5 176.29 165.08 5390.8 5546.4 6364.5 4120 4136 6159.7 7468.8 6358.3 6621.9 6546.9 6395.5 5502.5 7035.3 6330.8 7638 6902.4 7163.2 8495.7 5000.1 5064.4 6341.2 4317.2 4567.2 6079.9 7310.3 6485.5 6783.6 6576 6598.7 5666.2 7190.5 6536.5 7726.2 7018.1 6867.5 8047.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38180000 1634 4056 1565 3028 2460 2460 1 9606 Homo sapiens 0.11233062365295154 ALLLTGDFSQAGNK Unmodified 1433.7514 0.75144346 4505 Q9H2W6 MRPL46 39S ribosomal protein L46, mitochondrial yes yes 0 0 0 1.5 0.5 1 1 60.157 60.163 3 5.6948E-17 18703 20230619_1881_Aki_TMTPro18x_K_F2 213.99 196.19 41592 33584 37300 47762 43732 44881 49448 48920 53753 50193 51454 54483 52378 52249 51194 58570 52306 59121 38423 30862 38409 47009 45049 45692 49649 49745 54422 50794 52971 55043 53425 54267 52184 58770 50082 56123 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254730000 1635 4505 1566 3029;3030 2461 2461 1 9606 Homo sapiens 0.05191779480924197 ALLNHLDVGVGR Unmodified 1262.7095 0.70951906 1115 E5RFZ8;E5RGA7;E5RJ40;E5RJG5;E5RIP4;A0A0S2Z5C8;A0A0S2Z5B1;A0A0S2Z5Z7;A0A0S2Z534;Q15043-2;Q15043-3;Q15043 SLC39A14 Zinc transporter ZIP14 yes no 0 0 0 1 0 1 49.755 49.755 3 4.5841E-13 14301 20230619_1880_Aki_TMTPro18x_K_F1 171.32 124.9 73276 38767 49955 59177 46793 76288 61772 58671 92782 53499 45575 52218 64772 51408 55056 60655 63543 77124 67429 35725 52726 58256 49575 75341 62316 61027 90778 54421 49862 53036 65045 53599 56656 61700 60809 73029 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49999000 1636 1115 1567 3031 2462 2462 1 9606 Homo sapiens 0.08867268583003352 ALLNVVDNAR Unmodified 1083.6037 0.60365701 104 A0A8V8TQH6;A0A024R0Q4;A0A8V8TPY8;A0A8V8TRD4;Q8IV08;B4DEL6;A0A8V8TQH4 PLD3 Phospholipase D3 yes no 0 0 0 8 0 1 52.874 52.949 2 3.9686E-05 14839 20230619_1888_Aki_TMTPro18x_K_F8 150.27 117.15 245140 214380 223900 275980 233830 265480 276800 272850 317430 234510 241180 265910 275870 220820 267320 300920 274560 303310 226610 196730 229710 273440 243380 269370 277780 277320 317810 240130 252780 267080 280010 233550 272580 301130 262820 287950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234820000 1637 104 1568 3032 2463 2463 1 9606 Homo sapiens 0.06519932737546696 ALLPHVLCK Unmodified 1049.6056 0.60557126 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 4 0 1 51.108 51.14 3 0.00030073 14479 20230619_1883_Aki_TMTPro18x_K_F4 119.29 95.862 231840 199580 208390 218470 231270 269180 270720 293780 300670 233950 217420 207690 238650 189860 243320 242250 235400 214900 214270 182870 214100 219860 239630 268890 271570 296660 301160 238910 227930 211550 243060 199260 246880 241090 225160 204480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 783340000 1638 3957 1569 3033 2464 2464 1 9606 Homo sapiens 0.08275270221815845 ALLQEMPLTALLR Unmodified 1467.8483 0.84832073 560 A0A024R983;P10155;P10155-3;P10155-5;P10155-4;B3KN94 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 0 0 4.5 0.5 2 2 65.133 65.16 2;3 1.9655E-08 20478 20230619_1883_Aki_TMTPro18x_K_F4 165.09 145 21297 15527 19485 19461 19670 27578 23547 20138 26850 24992 25062 17810 23202 20481 23765 24268 20902 22239 19666 14255 19956 19431 20574 27084 23610 21217 27089 24799 25671 18523 23767 21242 24002 24213 20035 21140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 101780000 1639 560 1570 3034;3035;3036;3037 2465;2466 2465 2 9606 Homo sapiens 0.13311050436323058 ALLQEQFR Unmodified 1003.5451 0.5450795 1135 B4DRU9;A0A0S2Z5L1;Q9NUQ8-2;Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes no 0 0 0 7 0 1 49.212 49.296 2 0.004088 13260 20230619_1887_Aki_TMTPro18x_K_F7 105.57 65.523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1640 1135 1571 3038 2467 2467 1 9606 Homo sapiens 0.04344876163088429 ALLQQQPEDDSK Unmodified 1370.6678 0.66777341 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;Q96K98;Q96K97;Q9UHB9-3 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 0 3 0 1 46.101 46.18 2 0.00055304 12414 20230619_1882_Aki_TMTPro18x_K_F3 103.7 88.44 13541 12684 14759 15310 14625 17907 18785 16509 20559 18584 21348 27536 20271 19740 20063 25587 22695 23088 12542 11629 14899 15281 15322 17875 18749 17028 20863 18943 21863 27270 20733 20902 20582 25465 21692 21954 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14677000 1641 4661 1572 3039 2468 2468 1 9606 Homo sapiens -0.0027337668682321237 ALLQSSASR Unmodified 931.50869 0.50869399 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 3.5 2.69 1 1 1 1 38.398 38.424 2 3.793E-06 9363 20230619_1880_Aki_TMTPro18x_K_F1 186.54 88.528 525440 392740 430740 441600 604760 691140 530480 513920 841520 146760 139990 105760 127650 117980 277370 161200 188420 100630 484870 360140 448140 445190 613480 675770 548060 527410 809500 168390 176120 110170 138190 123480 273820 158310 180530 96544 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 830940000 1642 654 1573 3040;3041;3042;3043 2469;2470 2469 2 9606 Homo sapiens 0.040199992663815465 ALLQTHPEAQR Unmodified 1262.6731 0.67313356 3105 Q96CP2;I3L1Y9;I3L4I0 FLYWCH2 FLYWCH family member 2 yes no 0 0 0 6.5 0.5 1 1 35.781 35.853 3 4.466500000000001E-25 7923 20230619_1886_Aki_TMTPro18x_K_F6 222.28 160.17 21325 20333 21042 22368 24384 26410 28393 27185 29283 23840 29093 28762 26903 23802 23467 28211 33480 28704 19737 18625 21461 22485 25161 26422 28417 27631 29746 24427 29758 28820 27382 24942 24500 28294 31903 27275 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36694000 1643 3105 1574 3044;3045 2471;2472 2471 2 9606 Homo sapiens 0.05230391686313851 ALLREEEELAAR Unmodified 1398.7467 0.74669243 4818 yes yes 0 0 1 3 0 1 55.48 55.521 3 0.0022953 16574 20230619_1882_Aki_TMTPro18x_K_F3 80.871 40.281 + 47382 36030 41097 54147 53294 70596 56601 54773 74294 51760 51083 55212 62492 59877 53566 64284 57870 60405 43745 33138 42554 53350 54618 69716 57384 56975 73709 52658 54028 56065 63054 61805 54923 64289 55346 57404 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 246280000 1644 4818 1575 3046 2473 2473 1 9606 Homo sapiens 0.06326895338133909 ALLSAVTR Unmodified 829.50215 0.50215205 1411;3506 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;E5RIB1;E5RGY6;E5RJ41;E5RG03;P26232-2;P26232-5;P26232;P26232-3 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 0 4 0 1 48.964 49.002 2 0.0027239 13528 20230619_1883_Aki_TMTPro18x_K_F4 122.18 61.204 283890 228060 265870 254570 269000 311030 306920 300310 362940 209990 186880 148660 220440 148590 209110 277920 232360 177400 262340 209060 271590 255790 280400 309970 308880 305070 359140 215500 201280 154160 223260 160200 214490 271360 221720 169760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136700000 1645 1411;3506 1576 3047 2474 2474 1 9606 Homo sapiens 0.08058106105659135 ALLSNIEK Unmodified 886.51238 0.51238239 4584 Q9NRG1;Q9NRG1-2 PRTFDC1 Phosphoribosyltransferase domain-containing protein 1 yes no 0 0 0 8 0 1 52.802 52.877 2 0.0098315 14802 20230619_1888_Aki_TMTPro18x_K_F8 111.82 45.941 282750 247850 284430 287950 256370 346050 322260 333590 352770 372230 368960 362340 395070 333210 348590 438270 409020 415630 261580 227210 288490 288350 270770 345100 322160 342580 358430 373780 378880 367460 400210 350240 359120 437190 390810 394980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104720000 1646 4584 1577 3048 2475 2475 1 9606 Homo sapiens 0.06458669040239329 ALLTPVAIAAGR Unmodified 1151.7026 0.70264277 3371 V9HW90;P00390-2;P00390-3;P00390;P00390-5;P00390-4 HEL-75;GSR Glutathione reductase, mitochondrial yes no 0 0 0 4.5 0.5 2 2 57.282 57.314 2;3 4.5435E-13 16766 20230619_1885_Aki_TMTPro18x_K_F5 195.51 164.21 105910 94626 91827 99187 98422 129680 113460 106930 150180 110110 96649 84682 104810 85469 98628 119470 104900 93472 97883 86659 94631 100210 102380 128280 114590 110880 148700 110460 101960 87230 106430 89940 100860 118000 100230 89098 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 352480000 1647 3371 1578 3049;3050;3051;3052 2476;2477 2477 2 9606 Homo sapiens 0.1328595570246307 ALLTTNQLPQPDVFPLFK Unmodified 2041.1248 0.12481317 1692 A0A7P0TAR0;A0A7P0T868;Q9NY61;A0A7P0TBI0;A0A7P0Z4P2;A0A7P0Z4N2;A0A7P0Z434;A0A7P0TBG4 AATF Protein AATF yes no 0 0 0 3.5 0.5 1 1 65.028 65.05 3 9.0608E-05 20580 20230619_1882_Aki_TMTPro18x_K_F3 88.992 74.116 6920.5 5465.9 7052.8 8611.4 7711.3 7251.4 7099 8662.6 8759.9 9443.5 10121 6482.3 6834.2 8342.5 8607.7 9341.2 8150.1 11304 6398.8 5029.5 7170.1 8416.1 7933.3 7468.2 7252 8768.8 8885.4 9411.4 10154 6793.3 7179.6 8593.1 8702.5 9477.5 7824.2 10704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33420000 1648 1692 1579 3053;3054 2478 2478 1 9606 Homo sapiens 0.14589575414220235 ALLVQVVNK Unmodified 982.61752 0.61751616 2225 B2R5U7;Q03701 CEBPZ CCAAT/enhancer-binding protein zeta yes no 0 0 0 4 0 1 56.897 56.902 3 5.7027E-07 17029 20230619_1883_Aki_TMTPro18x_K_F4 141.39 112.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1649 2225 1580 3055 2479 2479 1 9606 Homo sapiens 0.12551210236654242 ALLVTASQCQQPAENK Unmodified 1756.8778 0.87778296 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;B4DNY3;Q5T0R2;Q5T0R1;Q5T0R4;Q5T0R3;Q5T0R5;Q5T0R6;Q5T0R7;Q5T0R9 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 0 0 7.5 0.5 1 1 49.415 49.493 3 1.0844E-14 13304 20230619_1888_Aki_TMTPro18x_K_F8 183 166.12 310280 236630 282940 310220 275490 301080 326540 304190 332540 349860 326520 310610 405200 309580 298960 458950 406830 351010 286580 217300 289760 307090 288090 305220 326470 311860 338450 349930 338560 317400 405900 327300 312690 452270 387830 334740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1368400000 1650 2327 1581 3056;3057 2480;2481 2481 2 9606 Homo sapiens 0.02961917923880719 ALLYLCGGDD Unmodified 1095.4907 0.49066067 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;A6NMY6;H0YL33;B3KRQ1;B4DNH8 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 4 1.41 1 1 1 1 1 63.43 63.458 2 1.6066E-05 19758 20230619_1883_Aki_TMTPro18x_K_F4 162.51 158.94 728290 514330 611060 537930 667550 867900 653440 666040 764240 927540 837290 880670 952880 850790 835880 889330 941630 1099900 671960 471450 630990 545920 690070 847820 663340 700880 776400 921980 860950 894600 963580 880960 858200 904710 901020 1041900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2608500000 1651 368 1582 3058;3059;3060;3061;3062 2482;2483;2484 2483 3 9606 Homo sapiens -0.053265037706296425 ALMDEVVK Oxidation (M) 919.46847 0.46846866 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DHB3;B4DWQ3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 1 0 3.75 0.829 2 1 1 45.828 45.896 2 0.0059924 12185 20230619_1882_Aki_TMTPro18x_K_F3 106.36 70.594 616250 492600 560640 669810 733420 697400 652760 643330 708140 706880 896600 859810 822220 673940 760920 885050 866200 902820 569320 452450 577220 661940 745230 702100 664720 662900 725690 715550 907480 860100 838410 712490 781360 886610 828010 857180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 628730000 1652 3374 1583 3063;3064;3065;3066 2485;2486 2485 1976 2 9606 Homo sapiens 0.005513165516049412 ALMDEVVK Unmodified 903.47355 0.47355404 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DHB3;B4DWQ3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 4.5 1.12 1 1 1 1 53.316 53.372 2 0.0020362 15330 20230619_1886_Aki_TMTPro18x_K_F6 133.12 76.013 195410 173330 194610 197970 197010 222540 204260 195160 227220 240410 262110 258450 269150 198250 259230 255690 272130 264040 180780 158870 197810 198270 204700 222590 206310 202520 231650 241050 267590 259510 273770 209670 264460 256510 260200 250730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2308100000 1653 3374 1583 3067;3068;3069;3070 2487;2488 2488 2 9606 Homo sapiens 0.01795620414213772 ALMGLYHGQVLCK Unmodified 1488.7581 0.75812552 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5;A0A2R8YG21 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 4 0 1 54.242 54.258 3 0.0018462 15910 20230619_1883_Aki_TMTPro18x_K_F4 84.198 72.985 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1654 2908 1584 3071 2489 2489 1 9606 Homo sapiens 0.033296778362682744 ALMLQGVDLLADAVAVTMGPK Oxidation (M) 2128.1272 0.12719771 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;A0A7I2YQK6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;Q53SE2;E7ESH4;E7EXB4;A0A0S2Z415;P10809-2;C9JL25;C9JCQ4;C9JL19;C9J0S9 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 1 0 2 0 1 67.509 67.516 3 1.0079E-11 21726 20230619_1881_Aki_TMTPro18x_K_F2 131.11 111.79 5813.9 4020.7 5287.4 7371.6 7888.7 8365.9 8497.7 4836.4 5914.8 6485.3 8868.6 7505.5 6579.5 4077.1 7077.6 9007.2 5831.6 8277 5366.8 3709.5 5468.2 7169.2 7994.6 8299.9 8444 5244 6286.9 6496.8 8853.2 7467.7 6797.5 4584.1 7132.2 8923.2 5608.6 7860.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10812000 1655 272 1585 3072 2490 2490 162 1 9606 Homo sapiens 0.10825919765420622 ALMLQGVDLLADAVAVTMGPK Unmodified 2112.1323 0.13228309 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;A0A7I2YQK6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;Q53SE2;E7ESH4;E7EXB4;A0A0S2Z415;P10809-2;C9JL25;C9JCQ4;C9JL19;C9J0S9 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 3.5 0.5 1 1 69.352 69.386 3 7.1496E-05 22189 20230619_1882_Aki_TMTPro18x_K_F3 67.43 63.895 1721.4 0 2443.3 2177.1 1798.2 1100.4 1004.4 1048.4 1563.2 0 805.95 1980.7 2453.6 1924.8 3036.4 1803.5 2158.4 2951.3 1578.1 0 2408 2001.4 1798.3 1122.1 1076.2 1048.8 1525.2 0 884.93 1881.7 2478.1 1981.9 3022 1882.2 2064.2 2788.1 1 0 2 2 1 1 1 1 1 0 1 1 2 2 2 2 1 2 1346000 1656 272 1585 3073;3074 2491;2492 2491 2 9606 Homo sapiens 0.1207022362805219 ALMQVVDFLSR Unmodified 1277.6802 0.68019277 267 Q658J0;A0A024R3V5;A0A024R3V7;Q9GZT8-2;Q9GZT8;E7EXA3;Q6X734;Q9GZT8-3 DKFZp762L015;NIF3L1 NIF3-like protein 1 yes no 0 0 0 5 0 1 65.544 65.588 3 0.00036349 20402 20230619_1885_Aki_TMTPro18x_K_F5 97.214 80.189 3285.7 4498 5838.6 2191.1 3851.6 2376 4198.5 4853 4779.8 3133.2 3758.2 4527.1 3730.9 5706 4215.6 2049.6 4057.6 3193.7 3070.5 4095.5 5663.9 2424.1 4145.6 2458 4237.8 4736.7 4789.6 3302.9 3910 4566.5 3848.7 5642.6 4256.7 2192.8 3877.9 3024.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14589000 1657 267 1586 3075 2493 2493 1 9606 Homo sapiens 0.05245988242540989 ALNEACESVIQTACK Unmodified 1692.7811 0.78110538 4310 Q92896;Q92896-3;Q92896-2;H3BM42 GLG1 Golgi apparatus protein 1 yes no 0 0 0 6 0 1 53.944 54.021 3 0.045223 15594 20230619_1886_Aki_TMTPro18x_K_F6 44.925 27.706 40171 32370 36665 39492 38206 51815 50895 46853 53481 57786 49287 45745 57259 46060 45591 57586 51028 54227 37114 29697 37601 39456 39979 51320 50638 48488 54213 57453 51085 47005 57617 48134 46933 57461 48793 51529 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 328290000 1658 4310 1587 3076 2494 2494 1 9606 Homo sapiens -0.037573926275626945 ALNHEIEELEK Unmodified 1323.667 0.66704513 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1;A0JLM9;Q5T821 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 2 0 1 51.01 51.056 3 2.0172E-09 14923 20230619_1881_Aki_TMTPro18x_K_F2 186.58 118.05 209130 161410 178490 195890 174110 216080 203610 206620 239180 224480 234490 218220 247120 209480 218880 250210 249230 250990 193070 148100 183940 195270 182290 216700 204710 212200 241440 225780 241240 221640 250490 218560 224920 250740 238180 238380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 519600000 1659 128 1588 3077 2495 2495 1 9606 Homo sapiens 0.01815828664143737 ALNQEQVIAVHIDNGFMR Oxidation (M) 2070.0317 0.031657839 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 1 0 7 0 1 53.665 53.732 3 0.039366 15221 20230619_1887_Aki_TMTPro18x_K_F7 49.306 39.207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1660 1182 1589 3078 2496 2496 725 1 9606 Homo sapiens 0.03944327689396232 ALNVEPDGTGLTCSLAPNIISQL Unmodified 2382.2101 0.21007572 3528 V9HW35;P30044-2;P30044;P30044-3;P30044-4 HEL-S-55;PRDX5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 6.5 1.12 1 1 1 1 66.484 66.516 3 5.7306E-09 20715 20230619_1887_Aki_TMTPro18x_K_F7 116.48 103.44 148920 120770 151770 159510 163520 135700 190010 153920 163250 201290 162850 178680 176640 168220 191590 236160 201780 215960 137720 110890 154120 157610 169140 139570 189150 157380 168090 200120 167930 182060 180710 177370 195380 234960 193060 205280 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1198400000 1661 3528 1590 3079;3080;3081;3082 2497;2498;2499 2498 3 9606 Homo sapiens 0.07425908027107653 ALPAVQQNNLDEDLIR Unmodified 1807.9428 0.94282606 134 A0A024R1A3;P22314-2;P22314 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 3.5 0.5 1 1 56.979 56.998 3 2.3199E-14 17177 20230619_1882_Aki_TMTPro18x_K_F3 170.11 153 151590 158390 202190 205160 108170 161730 141220 165670 131860 163650 222430 227800 229330 189370 255990 182440 198670 188100 140800 145270 199790 202800 120840 166820 140540 169020 138480 167330 224390 227030 234920 196210 256260 184060 190570 178640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 471010000 1662 134 1591 3083;3084 2500;2501 2500 2 9606 Homo sapiens 0.07117235721375437 ALPAVQQNNLDEDLIRK Unmodified 1936.0378 0.037789075 134 A0A024R1A3;P22314-2;P22314 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 1 6.5 0.5 1 1 54.018 54.09 4 3.9954E-18 15373 20230619_1887_Aki_TMTPro18x_K_F7 171.08 157.18 131890 108470 121110 136610 117910 141880 132260 146410 164730 169510 175940 191110 193890 173010 141030 221370 204580 219930 121870 99533 123980 135720 123280 143150 133590 149850 166480 170720 180800 192460 194930 181570 148300 221350 195240 208850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 865030000 1663 134 1592 3085;3086 2502 2502 1 9606 Homo sapiens 0.1072116919256132 ALPESLGQHALR Unmodified 1290.7044 0.70443369 2229 B2R644;O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 7.5 0.5 1 1 43.277 43.321 3 1.9786E-24 10811 20230619_1888_Aki_TMTPro18x_K_F8 257.8 213.42 41053 34275 39672 35549 33740 34271 43690 41745 46887 39503 43733 41840 45554 37054 43114 41451 43859 43235 37955 31394 40300 35822 35757 34948 43578 42077 47427 40118 45091 42219 46306 38623 43915 41694 41952 41049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131710000 1664 2229 1593 3087;3088 2503 2503 1 9606 Homo sapiens 0.07070964720401207 ALPEVHYHLGQK Unmodified 1390.7357 0.73573382 1083 D3DRM8;B2RAT6;A0A0S2Z3Y7;P07902-2;P07902 hCG_2040046;GALT Galactose-1-phosphate uridylyltransferase yes no 0 0 0 1 0 1 44.344 44.344 4 2.9534E-05 12026 20230619_1880_Aki_TMTPro18x_K_F1 124.42 108.07 14166 10904 12791 9949.8 12218 12288 12855 12575 13314 15315 18393 23008 21614 20211 20422 20605 22047 24001 13084 9980.2 13080 10175 12746 12267 12948 12901 13749 15560 18809 22901 21911 20951 20878 20892 21092 22753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14936000 1665 1083 1594 3089 2504 2504 1 9606 Homo sapiens 0.05599537754483208 ALPFWNEEIVPQIK Unmodified 1682.9032 0.90319307 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q6FHK8;B4DKL5;B4DMJ7;B7Z9E5;B4DJA4;P15259;A4D2J6;Q8N0Y7;B7ZW15 PGAM1;hCG_2015269;PGAM2;PGAM4 Phosphoglycerate mutase;Phosphoglycerate mutase 1;Phosphoglycerate mutase 2;Probable phosphoglycerate mutase 4 yes no 0 0 0 1.5 0.5 1 1 64.236 64.24 3 1.0532E-06 20211 20230619_1880_Aki_TMTPro18x_K_F1 124.12 109.56 405570 334840 350990 417220 289220 406690 428350 428650 436020 489020 482710 473730 521130 484370 524830 604940 519760 587980 374620 307230 360720 414420 309780 412330 424140 438040 445830 490440 494840 482250 531080 505500 533820 604780 497820 558390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1149500000 1666 3475 1595 3090;3091 2505;2506;2507 2505 3 9606 Homo sapiens 0.08905760508605454 ALPGQLK Unmodified 725.44357 0.44357454 3419;2729 C7DJS2;V9HWE9;P09211;C7DJS1;A0A087X243 GSTP1;HEL-S-22 Glutathione S-transferase P no no 0 0 0 1.5 0.5 1 1 46.222 46.261 2 0.010382 12864 20230619_1880_Aki_TMTPro18x_K_F1 118.06 59.479 2033400 1393700 1281100 1671800 1660800 2480200 1648100 1852800 3369400 2256200 2355900 3708100 3434200 3560200 1499800 5065600 5824400 6057100 1872600 1279200 1372700 1675000 1705700 2430500 1714300 1946600 3292200 2306800 2517800 3694200 3389800 3754600 1817400 5109100 5532500 5741700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1850399999.9999998 1667 2729;3419 1596 3092;3093 2508;2509 2508 2 9606 Homo sapiens 0.06987049531187495 ALPGSSQPR Unmodified 911.48248 0.48247924 1113 B4DND5;A0A8I5KX76;O75112;V5T7C5;B4DGP4;A0A0S2Z501;O75112-5;C9JWU6;O75112-7;O75112-4;A0A0C4DGG7 LDB3;OPN4 LIM domain-binding protein 3 yes no 0 0 0 7 0.816 1 1 1 34.052 34.093 2 0.00047567 6931 20230619_1887_Aki_TMTPro18x_K_F7 134.48 82.247 26695 17868 30489 51696 74737 62173 39720 47172 49103 40178 55483 45799 53024 45235 46727 32217 63411 49699 24685 16628 31416 49437 73035 61715 42380 49033 49748 41184 56441 46238 53905 46020 48456 33618 60415 47070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 24885000 1668 1113 1597 3094;3095;3096 2510;2511 2510 2 9606 Homo sapiens 0.02319730094905026 ALPGTPVASSQPR Unmodified 1279.6884 0.68844927 1254 A0A146E5L3;O14498 ISLR Immunoglobulin superfamily containing leucine-rich repeat protein yes no 0 0 0 1 0 1 41.457 41.457 2 3.3192E-07 10743 20230619_1880_Aki_TMTPro18x_K_F1 178.1 108.67 14388 8280.9 13509 12198 30717 42695 29462 30330 48888 39377 43135 54249 49857 49877 51981 56026 58566 61391 13273 7624.4 14070 12380 30619 40535 30341 32039 48453 39808 44905 54229 50838 51881 53205 56493 55991 58242 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36456000 1669 1254 1598 3097 2512 2512 1 9606 Homo sapiens 0.059792584834895024 ALPLEAEVAPVK Unmodified 1235.7125 0.71253876 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;B4DM10;Q6NX68;A0A024R2V2;A0A024R2S1 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 0 5.5 0.5 1 1 57.595 57.659 3 0.00099637 16951 20230619_1885_Aki_TMTPro18x_K_F5 88.441 72.902 43826 44714 40990 52253 43615 47990 50547 48062 58921 58969 56134 58737 57694 51470 58730 57991 53999 68379 40565 40972 41986 52089 45293 48868 50812 49409 59458 59006 57822 59367 58891 53689 59443 58755 51811 64784 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326380000 1670 2902 1600 3098;3099 2513 2513 1 9606 Homo sapiens 0.10411098917143136 ALPLIVGAQLIHADK Unmodified 1557.9243 0.92426287 4054 Q5SSJ5;B0QZK9;B0QZK8;Q5SSJ5-5 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 3.5 0.5 1 1 62.232 62.25 3 2.3034E-14 19352 20230619_1882_Aki_TMTPro18x_K_F3 186.56 166.8 160330 149130 176090 178260 151360 162800 185100 190970 204830 204240 202000 185150 199500 179630 186110 203530 194750 226550 148500 136720 177210 177510 159990 166490 185360 193490 207460 205090 207170 188700 203120 186770 190080 205390 186470 214810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 223190000 1671 4054 1601 3100;3101 2514;2515 2514 2 9606 Homo sapiens 0.16761770608127335 ALPPAQAGALLLALPPASPSAAR Unmodified 2152.2368 0.23682323 2715 B7ZMD6;Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes no 0 0 0 6 0 1 63.302 63.35 3 2.7867E-08 19602 20230619_1886_Aki_TMTPro18x_K_F6 97.69 81.934 8735.4 11602 8291.8 7785.6 9056.8 12324 14884 10183 12054 10129 9805.9 13677 10104 10156 13640 11229 11458 13288 8105.5 10581 8478 8251.5 9510.1 12077 14562 10560 12343 10352 10219 13589 10481 10641 13675 11391 10997 12592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54286000 1672 2715 1602 3102 2516 2516 1 9606 Homo sapiens 0.20679429491337942 ALPQTPRPR Unmodified 1034.5985 0.59851205 1230 Q9UQ35;A0A140VK53;O60382;Q9UQ35-2;I3L3Q8 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 0 1 4.5 0.5 1 1 33.658 33.727 3 0.0011576 6978 20230619_1883_Aki_TMTPro18x_K_F4 100.98 27.009 43124 39354 43226 46714 53373 50971 54137 55066 57169 53207 63460 65349 62829 52001 64252 64674 59836 57907 39905 36078 44070 46639 54585 51338 54640 55922 58304 54231 64814 65355 64189 54733 65070 64418 57280 55079 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53229000 1673 1230 1603 3103;3104 2517 2517 1 9606 Homo sapiens 0.08259673665611444 ALPSEELNR Unmodified 1027.5298 0.52982336 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C0V6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 2.5 0.5 1 1 41.685 41.755 2 1.4657E-06 10358 20230619_1882_Aki_TMTPro18x_K_F3 191.38 130.7 565850 450890 458450 487160 516030 567550 517030 524690 693520 664980 635270 632370 739370 528970 538140 781180 675690 655060 522320 413210 475640 490230 532060 567040 526690 542620 694470 663660 658770 640140 741200 562700 559690 773150 645020 623590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 490470000 1674 1676;2901 1604 3105;3106 2518;2519 2519 2 9606 Homo sapiens 0.017159645752371944 ALQAAYGASAPSVTSAALR Unmodified 1803.9479 0.94791144 3062 H3BLU7;V9HWA2;O43488 AKR7A2;HEL-S-166mP Aflatoxin B1 aldehyde reductase member 2 yes no 0 0 0 3 0 1 53.325 53.377 3 1.2805000000000001E-24 15642 20230619_1882_Aki_TMTPro18x_K_F3 147.06 112.63 59345 44933 56058 61691 55298 75913 64332 64779 85971 61542 62955 61690 67336 52477 59931 68753 71623 70505 54824 41284 57263 61083 57903 75370 64994 66858 85363 62435 65850 62333 68225 55325 61765 68898 68407 66951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90543000 1675 3062 1605 3107 2520 2520 1 9606 Homo sapiens 0.07809539583990954 ALQALQQEHK Unmodified 1164.6251 0.62512073 171 K7EKV4;A0A024R1X3;Q9BRG1 VPS25 Vacuolar protein-sorting-associated protein 25 yes no 0 0 0 7.5 0.5 1 1 43.18 43.224 3 7.7722E-06 10567 20230619_1887_Aki_TMTPro18x_K_F7 156.58 121.89 88416 65894 80268 86938 93492 101130 98637 105680 128160 87834 85817 70771 84394 70347 82708 88174 94102 68586 81648 60521 82459 86252 96251 101270 100040 107130 127090 89284 89880 72691 86124 73515 84782 87222 89749 65445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99716000 1676 171 1606 3108;3109 2521 2521 1 9606 Homo sapiens 0.04939317766275053 ALQAQEIECR Unmodified 1216.587 0.58702067 4243 Q8NBJ5;M0QX72;Q6IPW8 COLGALT1;GLT25D1 Procollagen galactosyltransferase 1 yes no 0 0 0 2.5 0.5 1 1 41.236 41.295 2 3.9456E-07 10381 20230619_1881_Aki_TMTPro18x_K_F2 170.47 153.53 106140 86318 96697 109550 126440 136210 123620 117540 138990 136000 152210 155890 149990 129230 136870 155800 160990 162400 98067 79219 99541 109040 128910 135290 125260 121880 141260 137080 155470 156460 152550 135580 140850 156460 153810 154170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134920000 1677 4243 1607 3110;3111 2522;2523 2522 2 9606 Homo sapiens -0.012609362107014022 ALQASALK Unmodified 800.4756 0.47560295 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;A0A0M4FNU3;H3BR68 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 3.67 3.09 1 1 1 45.811 45.851 3 0.0024067 12513 20230619_1881_Aki_TMTPro18x_K_F2 104.44 27.959 470800 319050 352700 404840 634220 707150 516630 530470 797840 95784 94669 80522 92821 81214 246740 109760 124860 99139 433970 293030 372690 405490 634270 687820 535600 542300 766670 121210 130320 82962 102410 85254 240700 109680 120460 94369 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 578130000 1678 3378 1608 3112;3113;3114 2524;2525 2524 2 9606 Homo sapiens 0.06738417214330639 ALQATVGNSYK Unmodified 1150.5982 0.59823728 783 B3KRY3;A0A024RDY3;P11279;P11279-2 LAMP1 Lysosome-associated membrane glycoprotein 1 yes no 0 0 0 1.5 0.5 1 1 46.544 46.584 3 2.3936E-17 12852 20230619_1881_Aki_TMTPro18x_K_F2 196.16 177.93 176690 163490 179160 186100 247310 260840 235330 241250 304090 189560 206490 200310 182140 145500 217950 205130 233590 174760 163530 149820 182870 187100 251170 257670 239980 246340 301640 194870 215420 201120 188390 155030 221770 203540 222940 166530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 402340000 1679 783 1609 3115;3116 2526 2526 1 9606 Homo sapiens 0.02896209155096585 ALQDAFSGLFWQPS Unmodified 1565.7514 0.75144346 381 A0A024R669;A0A024R688;P51948-2;P51948;H0YJ92 MNAT1 CDK-activating kinase assembly factor MAT1 yes no 0 0 0 2 0 1 67.962 67.969 2 0.0032405 21970 20230619_1881_Aki_TMTPro18x_K_F2 82.379 65.439 1442.7 1192.7 1627 1532.9 2594.4 2289.4 2016.2 1939.6 1996.2 2015 2677.1 1722 1272.6 1003 3084.4 1888 1440.2 2801.6 1335.6 1094.7 1650.8 1529.9 2597.2 2251 2066.1 2006.9 2060.8 2022.9 2649.7 1740.8 1426.8 1107.6 3008 1936.9 1403.3 2646.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2391900 1680 381 1610 3117 2527 2527 1 9606 Homo sapiens -0.008802205191159373 ALQDEWDAVMLHSFTLR Unmodified 2030.9884 0.98839604 4685 Q9UMS4;F5GY56 PRPF19 Pre-mRNA-processing factor 19 yes no 0 0 0 7.5 0.5 1 1 63.996 64.022 3 4.0156E-48 19653 20230619_1887_Aki_TMTPro18x_K_F7 272.4 236.77 61882 48404 61258 64938 44374 67810 58757 54541 78165 65913 58959 76033 82579 77709 73545 77876 74506 91497 57200 44456 62068 64237 47998 67993 59011 56980 77762 66376 62554 76725 83161 80097 75024 79012 71395 86698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220750000 1681 4685 1611 3118;3119 2528 2528 1 9606 Homo sapiens 0.014141379120701458 ALQDLENAASGDAAVHQR Unmodified 1864.9028 0.90275216 703 A0A0C4DGQ6;A0A024RC37;Q96P16;Q96P16-3;K7EP82 RPRD1A;P15RS Regulation of nuclear pre-mRNA domain-containing protein 1A yes no 0 0 0 3 0 1 50.749 50.82 3 7.339700000000001E-41 14490 20230619_1882_Aki_TMTPro18x_K_F3 187.46 163.98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1682 703 1612 3120 2529 2529 1 9606 Homo sapiens 0.0048968905080073455 ALQDLENAASGDATVR Unmodified 1629.7958 0.79582747 4574 Q9NQG5;A2A2M0 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes no 0 0 0 3 0 1 56.635 56.672 3 5.1848E-15 17051 20230619_1882_Aki_TMTPro18x_K_F3 188.9 160.69 63078 49794 59159 62350 55490 67851 64057 63511 66316 71846 71845 70379 76912 59762 75888 74105 69185 73360 58283 45697 60393 62007 58212 68078 64184 65409 67690 72104 73682 71157 78232 62785 76808 74207 66290 69671 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 344900000 1683 4574 1613 3121 2530 2530 1 9606 Homo sapiens 0.006121388363908409 ALQDLGLR Unmodified 884.50797 0.50796571 3364 V9HW53;O95865;H0Y7N1;A0A140T971;Q5SSV3;Q5SRR8 HEL-S-277;DDAH2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes no 0 0 0 6.5 0.5 1 1 51.46 51.537 2 0.0053725 14274 20230619_1887_Aki_TMTPro18x_K_F7 113.7 45.795 289520 278660 242100 313930 384020 378660 347240 334680 500250 322240 366070 365470 318030 328300 335550 373890 413110 400450 267640 255290 252420 314920 386710 377160 356670 344660 495010 328110 379790 367910 327520 342040 345390 376390 394420 380120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 961160000 1684 3364 1614 3122;3123 2531 2531 1 9606 Homo sapiens 0.061092046173257586 ALQDSAPDRPSPVER Unmodified 1636.8169 0.81689726 1269 Q9H9B1;A0A1B0GV09;Q9H9B1-3;A0A1B0GU48;A0A0C4DGF8;A0A1B0GWF6 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes no 0 0 1 3 0 1 36.451 36.506 3 6.506299999999999E-19 8164 20230619_1882_Aki_TMTPro18x_K_F3 209.13 183.77 45676 36312 45338 48131 45274 50738 44897 44928 58472 58247 59007 59833 66417 52495 54392 63543 66210 52687 42225 33344 46095 47660 47051 50973 45726 46664 58844 58212 60832 60416 66961 54975 56217 63053 63141 50207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67795000 1685 1269 1615 3124 2532 2532 1 9606 Homo sapiens 0.023961489359408006 ALQEFDLALR Unmodified 1174.6346 0.63462279 2338 B7Z6D5;B3GQE6;Q96GQ7;Q53G15 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 0 0 6 0 1 61.215 61.27 2 4.5205E-05 18663 20230619_1886_Aki_TMTPro18x_K_F6 147.4 101.43 81951 73622 81309 97752 78223 101480 98867 87757 97787 105120 105930 98076 110200 86754 95594 119320 117420 128690 75819 67576 82734 96737 82140 101970 98443 91116 100040 105090 108430 99557 111610 91650 98803 119820 112210 122090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61776000 1686 2338 1616 3125 2533 2533 1 9606 Homo sapiens 0.05429086051799459 ALQEGDLASSR Unmodified 1145.5677 0.56766543 754 A0A024RDA1;A1LT29;Q9NV70-2;Q9NV70 EXOC1 Exocyst complex component 1 yes no 0 0 0 2.5 0.5 1 1 40.214 40.279 2 1.8568E-08 9726 20230619_1882_Aki_TMTPro18x_K_F3 204.56 141.25 91003 69171 86731 88701 96624 109880 106450 105130 120890 107750 122170 117240 116470 107240 100460 123550 140290 137370 84078 63506 88634 88253 99887 109380 107210 107790 122330 109080 124980 118300 118390 111800 104760 124600 133820 130340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77670000 1687 754 1617 3126;3127 2534;2535 2535 2 9606 Homo sapiens 0.0007043077005164378 ALQEGEGDLSISADR Unmodified 1559.7427 0.74272927 2568 B4DPV7;P49589-3;A8K067;B4DKY1;A0A024RCG3;P49589-2;P49589;A8MVQ3;B4DI19;Q53HG6 CARS Cysteine--tRNA ligase, cytoplasmic yes no 0 0 0 1 0 1 48.508 48.508 2 1.4385E-41 13753 20230619_1880_Aki_TMTPro18x_K_F1 274.39 237.2 26931 21068 25017 23716 16741 24726 23232 20541 23692 32377 32566 41275 36934 30282 33137 38075 37114 42449 24881 19316 25446 23756 18269 24825 23079 21608 24499 32339 33248 41088 37367 32016 34011 38365 35509 40252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16940000 1688 2568 1618 3128 2536 2536 1 9606 Homo sapiens -0.014752389462046267 ALQEGQPEEDETDDRR Unmodified 1886.8242 0.82422706 4330 Q96BZ8 LENG1 Leukocyte receptor cluster member 1 yes yes 0 0 1 1 0 1 34.201 34.201 3 4.2816E-06 7666 20230619_1880_Aki_TMTPro18x_K_F1 114.64 105.93 7046.2 5449.9 6300.1 6817.7 5633.3 7712.7 8398.8 7027.6 10162 9147.6 8094.2 8695.9 11893 8277 8426.4 9615.1 8200.9 8266.7 6507.5 5001.9 6458.7 6783.9 5993.6 7711.7 8356 7286.7 10172 9122.6 8569.6 8830.8 11839 8629.6 8623.2 9563.4 7849.2 7865.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10091000 1689 4330 1619 3129 2537 2537 1 9606 Homo sapiens -0.08371208044968625 ALQFLEEVK Unmodified 1075.5914 0.59136099 765 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 7 0.816 1 1 1 62.857 62.894 3 0.00059 19347 20230619_1886_Aki_TMTPro18x_K_F6 98.048 60.937 116710 102350 108410 125920 101140 125260 120150 126060 133390 144850 125540 131320 153910 122470 138560 154640 136500 154520 107910 93874 110830 125210 106280 126710 120490 129220 134960 144950 130480 133620 155390 128390 141140 154830 130750 146700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5380000000 1690 765 1620 3130;3131;3132 2538;2539 2538 2 9606 Homo sapiens 0.05658896274530889 ALQIPEVYLR Unmodified 1200.6867 0.68665836 495 Q14C86-6;Q14C86;Q14C86-2;Q14C86-5;Q14C86-4;A0A024R8A2;A0A024R862;F8W9S7;Q14C86-3;A0A024R875;B3KN67;B3KTX2;B3KMM3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 0 0 0 1 0 1 60.375 60.375 2 0.0044461 18662 20230619_1880_Aki_TMTPro18x_K_F1 91.584 60.211 24895 22941 27753 27971 20315 23411 25457 23579 28912 36194 32426 29799 35085 29175 32656 35210 36210 43831 23060 21036 27843 27782 21829 24030 25491 24426 29438 35700 33204 30519 35605 30464 33462 35755 34664 41511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75649000 1691 495 1621 3133 2540 2540 1 9606 Homo sapiens 0.09434249465539324 ALQLEEER Unmodified 986.50327 0.50327426 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437 EZR;HEL-S-105 Ezrin yes no 0 0 0 1 0 1 42.345 42.345 2 0.068806 11106 20230619_1880_Aki_TMTPro18x_K_F1 68.371 24.601 572320 484030 525310 566190 710890 736600 716580 632670 777790 488560 534700 441870 538490 417910 533490 507900 518380 388720 528960 443800 540610 567250 723570 729680 723540 649820 778350 500750 559720 450460 549030 436670 541550 502470 495230 370940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 499100000 1692 3456 1622 3134 2541 2541 1 9606 Homo sapiens 0.009482756839020112 ALQLEEERK Unmodified 1114.5982 0.59823728 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437 EZR;HEL-S-105 Ezrin yes no 0 0 1 3.5 0.5 1 1 41.085 41.135 3 0.0031706 10077 20230619_1882_Aki_TMTPro18x_K_F3 72.582 37.234 159170 108810 116760 180070 180780 220460 160210 207900 306500 242420 271880 329610 345100 346690 186220 494600 473620 498250 146700 100250 123510 176300 182750 219400 167230 214050 302450 246050 283870 331590 343110 364580 209730 493810 450550 473110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 546410000 1693 3456 1623 3135;3136 2542 2542 1 9606 Homo sapiens 0.04552209155099263 ALQLLHDIR Unmodified 1077.6295 0.62947783 3220 O14578;O14578-4;A0A7I2V365;A0A7I2V4A6;A0A7I2V4I0;A0A7I2V692;A0A7I2V4H7;H7BYJ3;O14578-3;A0A7I2YQJ8;A0A7I2V2G7 CIT Citron Rho-interacting kinase yes no 0 0 0 1 0 1 52.371 52.371 3 3.4354E-05 15345 20230619_1880_Aki_TMTPro18x_K_F1 152.11 69.686 20547 15674 20954 21738 20976 24520 24456 24344 26251 20739 23316 20571 21216 19304 22102 19717 21305 21188 18995 14402 21260 21488 21886 24569 24513 24786 26501 21157 23955 20859 21769 19974 22402 19900 20391 20110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74458000 1694 3220 1624 3137 2543 2543 1 9606 Homo sapiens 0.0937682697983746 ALQLSEPGK Unmodified 941.5182 0.51819605 4489 Q9H061;Q9H061-2 TMEM126A Transmembrane protein 126A yes no 0 0 0 6 0 1 47.724 47.805 3 0.015531 12938 20230619_1886_Aki_TMTPro18x_K_F6 64.297 33.733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1695 4489 1625 3138 2544 2544 1 9606 Homo sapiens 0.04509767551905952 ALQNAVTTFVNR Unmodified 1332.715 0.71499837 1103 O14964;A0A7I2V3F9;A0A7I2V5A3;A0A7I2V3Z1;A0A7I2V6E0;A0A7I2V2K2;A0A7I2V5A2;A0A7I2V3I8;A0A7I2V2D8;A0A7I2V2W5;A0A7I2V2R9;A0A7I2V3J3;A0A0S2Z4R4;A0A7I2V637;B4E1E2;A0A0S2Z4Q4;O14964-2;A0A7I2YQD1;A0A7I2V307;I3L1P5;A0A7I2V331 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 4 0 1 57.189 57.195 3 0.0023178 17167 20230619_1883_Aki_TMTPro18x_K_F4 74.077 51.435 44573 30632 36786 34329 35656 39987 40765 34841 46930 39431 45415 38191 47247 39878 40915 45104 38732 39223 41114 28099 37984 34456 37294 39897 40989 36088 47370 39599 46693 38924 47851 41350 41620 44907 37083 37314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63370000 1696 1103 1626 3139 2545 2545 1 9606 Homo sapiens 0.06194947374842741 ALQQEQEIEQR Unmodified 1370.679 0.6790068 1158;459 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RR30;A0A024R7K7;A0A024R7M6;Q86YP4-2;Q86YP4;Q86YP4-3;B4DKZ7;B4E0Q6 GATAD2B;GATAD2A Transcriptional repressor p66-beta;Transcriptional repressor p66-alpha no no 0 0 0 1 0 1 39.687 39.687 3 1.4945E-06 9962 20230619_1880_Aki_TMTPro18x_K_F1 158.08 114.54 56472 35867 56169 63089 73885 78348 67203 71461 78081 65807 76749 71013 60129 57829 82828 60282 84038 73905 52143 33084 57389 61620 75150 77869 68492 73311 78827 66985 78084 71416 63025 60207 83762 61378 80325 70088 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125500000 1697 1158;459 1627 3140 2546 2546 1 9606 Homo sapiens 0.008494454073115776 ALQQHLCVVQLTR Unmodified 1564.8508 0.85078035 2127 A8K8X0;Q14CX7-2;Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes no 0 0 0 4 0 1 47.437 47.479 3 2.7738E-26 12827 20230619_1883_Aki_TMTPro18x_K_F4 212.1 165.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1698 2127 1628 3141 2547 2547 1 9606 Homo sapiens 0.09094898893977188 ALQQLQR Unmodified 855.49265 0.49265 4396 Q96SL4 GPX7 Glutathione peroxidase 7 yes yes 0 0 0 1 0 1 39.109 39.109 2 0.045072 9685 20230619_1880_Aki_TMTPro18x_K_F1 79.939 8.5613 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1699 4396 1629 3142 2548 2548 1 9606 Homo sapiens 0.05912337820143421 ALQQYTLEPSEKPFDLK Unmodified 2006.0361 0.03605774 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 1 7.33 0.471 2 1 59.156 59.202 3 1.6745E-13 17470 20230619_1888_Aki_TMTPro18x_K_F8 158.64 128.55 140200 119550 128150 140140 132580 157570 153800 155470 144900 186040 168610 145990 159870 123380 161730 142080 137390 102780 129580 109610 131350 140080 138000 157960 153610 159730 149270 185050 171380 149220 163380 129030 162970 140390 131450 98162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82231000 1700 4753 1630 3143;3144;3145 2549;2550 2550 2 9606 Homo sapiens 0.07328115383916156 ALQRPSAAAPQAENGPAAAPAVAAPAATEAPK Unmodified 2964.5417 0.54173204 1555 A0A499FI31;Q15020;Q15020-4;B4DYA2 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 1 7 0 1 46.167 46.254 4 0.0044086 11859 20230619_1887_Aki_TMTPro18x_K_F7 64.532 51.977 9703.2 6580.4 6866.2 8567.2 7951 8328.3 7026.1 8740.3 12753 10874 11622 12055 11106 8702.3 13317 12998 11990 9878.7 8941 6045.4 7234.9 8483.6 8164.9 8450.3 7318 8954.1 12617 10914 11960 12072 11450 9310.8 13427 12821 11471 9423.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52677000 1701 1555 1631 3146 2551 2551 1 9606 Homo sapiens 0.138042843162566 ALQSGPPQSR Unmodified 1039.5411 0.54105675 3211 O00425;O00425-2 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes no 0 0 0 7 0.816 1 1 1 33.028 33.07 2 0.0001961 6512 20230619_1887_Aki_TMTPro18x_K_F7 138.08 103.27 35761 22304 46504 40545 73754 91058 57726 70478 73066 18321 26323 37357 29448 23270 40086 16488 36414 29881 33101 20585 46737 40070 74095 87680 59595 71950 71540 21987 29449 36569 30470 24120 40234 17508 34831 28263 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 30511000 1702 3211 1632 3147;3148;3149 2552;2553 2552 2 9606 Homo sapiens 0.022867866693559336 ALQSGQCAGAALDVFTEEPPRDR Unmodified 2487.1812 0.1812352 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;A0A286YFA2;A0A286YFL2;Q9UMY2;Q8N5M8;A0A286YF78 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase yes no 0 0 1 4.5 0.5 2 2 54.209 54.251 3 3.0195999999999997E-53 15812 20230619_1883_Aki_TMTPro18x_K_F4 257.99 242.57 376500 315400 337740 348980 318140 377670 336090 319220 327100 397420 483630 553750 442290 404560 564390 489460 508230 638320 347890 289050 346070 350140 332720 378460 337810 332450 340120 402010 487810 549800 458580 426710 568300 499010 487710 604220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1225500000 1703 1334 1633 3150;3151;3152;3153 2554;2555;2556 2554 3 9606 Homo sapiens -0.0028681654930551304 ALQSLACGKPTQR Unmodified 1428.7507 0.75073195 283 Q53S54;A0A024R475;Q13618-2;Q13618;B7Z600;Q13618-3 CUL3 Cullin-3 yes no 0 0 1 5 0 1 43.578 43.658 3 0.0018963 11047 20230619_1885_Aki_TMTPro18x_K_F5 80.116 58.566 223180 162360 240650 234420 273480 317970 288390 268340 318340 276090 318640 292450 304830 263520 263400 278460 315770 271400 206360 149290 243510 231830 281940 313920 290800 277780 322450 279250 326090 295250 309640 273530 271530 279200 301320 258010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165960000 1704 283 1634 3154 2557 2557 1 9606 Homo sapiens 0.053506615601918384 ALQSQSWK Unmodified 946.48723 0.48723027 1731 A0A804HJA4;J3KN16;Q5VYK3;B3KXF2;F6XAQ5 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 2 0 1 46.354 46.433 2 1.453E-05 12791 20230619_1881_Aki_TMTPro18x_K_F2 143.45 89.897 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1705 1731 1635 3155 2558 2558 1 9606 Homo sapiens 0.011846142376725766 ALQYACGNALVCDNVEDARR Unmodified 2294.0532 0.053197918 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 1 5.5 0.5 1 1 48.937 49.015 3 4.3796E-55 13469 20230619_1886_Aki_TMTPro18x_K_F6 282.5 266.56 76689 66260 70230 72144 53136 59864 70327 67951 58453 98463 82600 78377 95214 76926 70320 115330 93368 99843 70888 60708 71631 72261 56989 61690 69602 69686 61381 97177 84120 80473 95578 81449 73471 114260 89156 94971 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199210000 1706 1432 1636 3156;3157 2559 2559 1 9606 Homo sapiens -0.04206655344205501 ALQYEYASK Unmodified 1071.5237 0.52367535 3116 I6L975;Q3SXM5-2;Q3SXM5 HSDL1 Inactive hydroxysteroid dehydrogenase-like protein 1 yes no 0 0 0 7 0 1 47.357 47.445 3 0.0082029 12402 20230619_1887_Aki_TMTPro18x_K_F7 79.16 51.418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1707 3116 1637 3158 2560 2560 1 9606 Homo sapiens -0.009225536563008063 ALRPDLADK Unmodified 997.55564 0.55564418 4267 V9HWF3;Q8TCD5;A0A384NYP3;J3KSX6;J3KRC4;Q8TCD5-2 HEL74;NT5C 5'(3')-deoxyribonucleotidase, cytosolic type yes no 0 0 1 6.5 0.5 1 1 42.541 42.626 3 0.0025738 10337 20230619_1887_Aki_TMTPro18x_K_F7 91.095 41.728 495150 345000 392430 452290 480360 491040 549660 548070 656230 493890 563610 539560 578080 475010 511460 611900 627710 557190 456640 316940 408900 448450 493910 494920 553250 554490 658180 503670 583050 543920 586430 499310 528200 609370 598980 530060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 405980000 1708 4267 1638 3159;3160 2561;2562 2562 2 9606 Homo sapiens 0.056768588175032164 ALRPEVER Unmodified 968.54033 0.54032847 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;A0A494C1D7;B4DSS9;B4DGY0;Q03001-13 DST Dystonin yes no 0 0 1 4.5 0.5 1 1 32.151 32.221 3 0.034621 6384 20230619_1883_Aki_TMTPro18x_K_F4 82.529 30.9 79101 58913 80749 87152 116040 114600 93406 89452 115350 98741 116780 118540 115490 99691 113110 117090 136450 119620 73114 54179 82438 85992 117050 113230 96162 93385 116300 99955 119710 118820 117840 104360 116360 117530 130210 113650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53115000 1709 1693 1639 3161;3162 2563 2563 1 9606 Homo sapiens 0.05479992020332247 ALSDADVQK Acetyl (Protein N-term) 987.48729 0.48728985 3556 Q53Y06;P36543;P36543-3;P36543-2 ATP6V1E1 V-type proton ATPase subunit E 1 yes no 1 0 0 1.5 0.5 1 1 48.18 48.215 2 9.4937E-18 13614 20230619_1880_Aki_TMTPro18x_K_F1 130.04 90.497 126340 93557 108320 122050 110600 111440 116760 120730 144540 142610 165840 163280 167340 149320 150690 174860 203000 176390 116610 85920 111630 120770 114870 113740 118280 123300 146510 143590 169180 164410 170050 155790 156530 175340 193540 167620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 481760000 1710 3556 1640 3163;3164 2564 2564 1 9606 Homo sapiens -0.006954305530030069 ALSEFGSK Unmodified 837.42323 0.42323303 3873 Q14008-2;Q14008;Q14008-3;Q8NAH3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 7 0 1 48.806 48.892 2 0.0093226 13112 20230619_1887_Aki_TMTPro18x_K_F7 111.17 46.903 154460 108780 118770 151120 126850 132560 136350 141700 201210 194720 206940 211610 231040 178860 128870 280690 280180 280510 142420 99989 123920 148830 131530 135670 138940 145580 201550 194480 212950 213100 230240 191050 142030 279890 266620 266430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104710000 1711 3873 1641 3165 2565 2565 1 9606 Homo sapiens -0.0019816591926655747 ALSEIAGMTLPYDTLDQVR Unmodified 2092.0511 0.051055878 1339 E5KRK5;A0A291FIZ5;P28331-4;P28331;P28331-2;P28331-5;B4DJ81;P28331-3;Q9P1A0 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 7 0 1 64.305 64.334 3 0.0073402 19816 20230619_1887_Aki_TMTPro18x_K_F7 62.468 42.89 23472 21038 22457 29964 23993 28641 24506 29326 27771 29451 34815 34678 38584 33576 28489 38371 37993 39270 21709 19325 22967 29491 24837 29064 24803 29913 28395 29911 35540 34950 38789 34919 29726 38504 36268 37285 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 380090000 1712 1339 1642 3166 2566 2566 1 9606 Homo sapiens 0.04871239189651533 ALSGVLEQDR Unmodified 1086.5669 0.56693715 2136 Q9Y450;Q9Y450-4;B3KNB9;A8K9E1;D9YZV0;E9PN23;E9PJ90;Q9P0A5;E9PLR4;E9PMN1;G5E991;Q9Y450-2 HBS1L HBS1-like protein yes no 0 0 0 4 0 1 47.973 48.014 2 0.0013791 13058 20230619_1883_Aki_TMTPro18x_K_F4 105.35 53.857 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1713 2136 1643 3167 2567 2567 1 9606 Homo sapiens 0.027116361209891693 ALSIFNELR Unmodified 1061.5869 0.58694431 4671 Q9UJX2-3;Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes no 0 0 0 1 0 1 61.977 61.977 2 0.0014484 19291 20230619_1880_Aki_TMTPro18x_K_F1 115.7 85.889 30722 22790 24175 29321 25474 29736 27374 26778 36277 29909 30739 31840 31868 29540 31287 33122 34131 33278 28341 20926 25153 29069 26454 29965 27761 27655 36216 30139 31858 32156 32484 30725 31992 33234 32623 31609 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69687000 1714 4671 1644 3168 2568 2568 1 9606 Homo sapiens 0.058614318515992636 ALSIGFETCR Unmodified 1152.5597 0.55974328 1496 P16070;P16070-11;H0YD13;B4DN59;A8K309;A0A385KNS5;P16070-7;P16070-12;P16070-14;P16070-13;P16070-8;P16070-10;P16070-17;P16070-3;P16070-16;P16070-6;P16070-4;P16070-18;P16070-5;H0Y2P0;A0A1Z1VXF2;P16070-15;P16070-9;H0Y5E4;H0YDW7;H0YCV9;E9PKC6;H0YDX6;H0YD17 CD44 CD44 antigen yes no 0 0 0 7.5 0.5 1 1 52.359 52.434 2 4.4553E-07 14669 20230619_1887_Aki_TMTPro18x_K_F7 187.82 150.09 427310 350770 388650 381150 396910 413370 409080 409680 425120 456530 520660 504950 495690 436430 537180 556630 560180 518310 394830 321430 398030 383080 411810 415690 412480 420060 436090 460240 528670 508340 508750 458630 546880 555270 535460 492860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 247240000 1715 1496 1645 3169;3170 2569;2570 2569 2 9606 Homo sapiens -0.010434197510903687 ALSIVESEQDK Unmodified 1217.6139 0.61394692 1819 Q6PGP7;A0A8V8TMA8;A0A8V8TMB2;A0A8V8TLS3;A0A8V8TLT2;A0A8V8TNJ4;A0A8V8TLU2 TTC37 Tetratricopeptide repeat protein 37 yes no 0 0 0 3 0 1 52.15 52.216 2 1.6363E-26 15128 20230619_1882_Aki_TMTPro18x_K_F3 230.65 156.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1716 1819 1646 3171 2571 2571 1 9606 Homo sapiens 0.013844508814599976 ALSMYEEAFQNTSDSDR Unmodified 1962.8265 0.82653525 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPW9;A0A8V8TPX4;A0A8V8TRC7;H7C3P6;A0A8V8TQG1;H0YDF4 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 3.5 0.5 1 1 60.639 60.655 3 1.3519000000000001E-24 18695 20230619_1882_Aki_TMTPro18x_K_F3 181.51 180.14 18964 15525 16707 17875 16911 20716 17816 17410 22339 15567 18337 18338 16176 17686 21475 18960 19231 18219 17518 14234 17171 17897 17603 20654 18050 17971 22314 15935 18919 18477 16858 18311 21606 19003 18414 17316 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28029000 1717 1852 1647 3172;3173 2572 2572 1 9606 Homo sapiens -0.1163649563150102 ALSNLESIPGGYNALR Unmodified 1673.8737 0.87368386 187;2631 B4DZF6;Q59F94;Q9NRR5;D3DVA8;H0YDS0;A0A024R258;B3KNI8;B3KNI2;Q9UMX0-2;Q9UMX0;Q9UMX0-3;Q59FJ2 UBQLN4;UBQLN1 Ubiquilin-4;Ubiquilin-1 no no 0 0 0 4.5 3.5 1 1 59.3 59.321 2 1.9398E-14 18210 20230619_1880_Aki_TMTPro18x_K_F1 233.32 200.48 67555 56691 68692 74014 57763 79072 71276 66788 72217 84890 84434 87320 89959 78767 75735 100170 85962 101050 62485 52038 69572 73369 61331 79251 71140 69592 74066 84886 86310 88254 90977 82658 77970 100290 82253 95910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51393000 1718 2631;187 1648 3174;3175 2573;2574 2573 2 9606 Homo sapiens 0.06370196492480318 ALSPAELR Unmodified 855.48142 0.48141661 1039 A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160;Q14160-3;A0A0G2JMS7;Q14160-2;H0YCG0 SCRIB Protein scribble homolog yes no 0 0 0 5 0 1 43.194 43.275 2 0.044079 10920 20230619_1885_Aki_TMTPro18x_K_F5 71.877 39.268 59377 44789 53078 52293 58606 68288 60660 62640 71458 53474 59251 56574 50778 51248 59455 54697 60005 54350 54829 41084 54525 52418 60550 67701 61379 64121 71634 54666 60997 57130 52568 53181 60308 54917 57368 51646 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36552000 1719 1039 1649 3176 2575 2575 1 9606 Homo sapiens 0.04789515725997262 ALSPLEEWLR Unmodified 1212.6503 0.65027285 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;A0A140T954;A2ABF4;A0A0G2JJT9;A0A140T904 VARS Valine--tRNA ligase yes no 0 0 0 7 0 1 63.395 63.427 2 0.0010662 19402 20230619_1887_Aki_TMTPro18x_K_F7 128.57 97.87 199650 151090 183810 196540 152440 213820 195730 196850 195380 294300 294290 309730 333950 302990 285520 329140 323870 364360 184400 138740 187700 194950 162340 214400 194980 204870 203420 292530 299120 313420 337370 314130 293550 332190 309790 345550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1062999999.9999999 1720 725 1650 3177 2576 2576 1 9606 Homo sapiens 0.05245372568833773 ALSQAAVEEEEEEEEEEEPAQGK Unmodified 2559.0984 0.098395818 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9;B3KY97;B3KPQ2 RRP12 RRP12-like protein yes no 0 0 0 1 0 1 52.504 52.504 3 2.374E-19 15388 20230619_1880_Aki_TMTPro18x_K_F1 153.82 151.31 12187 7411.3 9963.3 13417 8862.2 10177 14472 12752 13092 16330 16627 14456 17155 14278 12174 18803 13512 21086 11234 6840.4 10314 13002 9443.5 10587 14220 12953 13566 16247 16896 14767 17250 14983 12581 18926 12967 19976 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30542000 1721 2355 1651 3178 2577 2577 1 9606 Homo sapiens -0.11878944377576772 ALSQGVESVKK Unmodified 1144.6452 0.64518747 3189 M0QXU7;Q9UPE4;Q53G69;O43615 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 yes no 0 0 1 1.5 0.5 1 1 44.122 44.163 3 0.0021893 11993 20230619_1880_Aki_TMTPro18x_K_F1 82.202 48.977 215930 158740 212450 233440 262600 274410 255570 259060 317350 243600 275350 259860 271070 227480 265780 240840 314480 266570 199510 145980 216980 230040 268570 273970 259960 265280 317900 247670 284200 262020 276590 236480 272880 243360 300090 253090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148550000 1722 3189 1652 3179;3180 2578;2579 2578 2 9606 Homo sapiens 0.0786506870622361 ALSQLAEVEEK Unmodified 1215.6347 0.63468237 3862;2353 Q59GU6;Q53HL9;Q53GY8;Q13596;Q13596-2;Q13596-3;H0YK42;Q53GG3;B3KN57;B3KML1;O60749;O60749-2 SNX1;SNX2 Sorting nexin-1;Sorting nexin-2 no no 0 0 0 4.5 0.5 1 1 55.616 55.652 3 3.2238E-05 16489 20230619_1883_Aki_TMTPro18x_K_F4 136.7 99.354 108610 90468 104480 103380 96653 104130 105610 111820 116990 122870 127400 117670 131040 113380 121100 140490 143280 134720 100410 82935 106340 103410 101250 105450 106380 113980 119000 123410 130320 119630 133180 118520 124640 140370 136810 128050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 279710000 1723 3862;2353 1653 3181;3182 2580 2580 1 9606 Homo sapiens 0.035490412611579814 ALSSEGKPYVTK Unmodified 1278.682 0.68196691 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;A0A0D9SFH4;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 2 0 1 44.92 45.002 3 4.5794E-05 12136 20230619_1881_Aki_TMTPro18x_K_F2 119.87 93.095 784110 702880 848490 816570 963400 1089200 1043200 1029600 1256700 1238000 1278200 1126100 939790 981870 1164900 1146700 1101100 953870 725970 644280 858270 819160 993970 1079400 1053700 1061100 1268800 1236700 1294900 1143600 981750 1025200 1177000 1139200 1053100 908570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 536070000 1724 1022;3868 1654 3183 2581;2582 2581 2 9606 Homo sapiens 0.05377320532124941 ALSSEWKPEIR Unmodified 1314.6932 0.6932003 806;3082 P13591-1;A0A087WTF6;P13591;P13591-3;P13591-4;A0A087WV75;A0A087WWD4;A0A087WX77;A0A087WTE4;A0A087WWJ5;B4DSQ7;A0A087X1V2;A0A087WVU1;B7Z8D6;A0A087WZS4;A0A087WTR3;H7BYX6 NCAM1 Neural cell adhesion molecule 1 no no 0 0 1 8 0 1 49.566 49.639 3 0.00083117 13346 20230619_1888_Aki_TMTPro18x_K_F8 85.417 71.828 185220 175900 192390 276270 170710 206460 224480 233850 248970 242850 242210 244280 267600 244720 254520 292650 259010 292640 171490 161740 195060 269610 180590 214550 224030 237380 252000 245000 249990 248040 271810 254890 259510 293210 248010 277830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 360060000 1725 806;3082 1655 3184 2583 2583 1 9606 Homo sapiens 0.048441426262797904 ALSSGGSITSPPLSPALPK Unmodified 1778.9778 0.97781458 288 Q6Y7W6;Q6Y7W6-5;Q6Y7W6-4;A0A024R4A5;Q6Y7W6-3;I1E4Y6;E7ESB6;B4DRT8;C9JHW1;B4DLU7;C9JHT0;C9J0V6;C9JXQ0;F8WCD5;C9JPV7;C9JRZ2;C9JW88 GIGYF2;TNRC15 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 0 0 0 3 0 1 58.025 58.055 3 1.772E-07 17647 20230619_1882_Aki_TMTPro18x_K_F3 112.16 91.697 38127 34932 35643 42331 36968 42839 38086 38324 43934 44090 48973 48186 46382 44075 51758 54755 53680 56576 35262 32030 36474 42140 38353 43178 38531 39631 44628 44380 49906 48615 47709 46145 52662 54945 51363 53706 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38487000 1726 288 1656 3185 2584 2584 1 9606 Homo sapiens 0.11948478529325257 ALSTDPAAPNLK Unmodified 1196.6401 0.6401021 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 6.5 0.5 2 2 48.886 48.968 2;3 0.00014774 13100 20230619_1887_Aki_TMTPro18x_K_F7 104.82 69.724 123520 101630 105490 117020 121630 143940 139610 133770 151070 138040 153410 166960 169370 136280 149600 177030 175380 173490 114080 93175 109000 117270 125660 143270 140050 137490 153310 140180 158080 167170 171380 143740 154040 176970 167540 164820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 273570000 1727 1292 1657 3186;3187;3188;3189 2585;2586 2586 2 9606 Homo sapiens 0.04964764843612102 ALSTGEK Unmodified 704.37047 0.37046918 2036 P62937;A8K486;V9HWF5;B2RE56;B4DM82;Q71V99;F8WE65;C9J5S7;A0A0B4J2A2;A0A075B767;A0A0H2UH34;P0DN26;F5H284;Q9Y536;A0A075B759;P0DN37;B2RXF3 PPIA;HEL-S-69p;PPIAL4C;PPIAL4D;PPIAL4A;PPIAL4E Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4D;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C yes no 0 0 0 4.5 0.5 1 1 38.041 38.109 2 0.01504 8750 20230619_1883_Aki_TMTPro18x_K_F4 111.82 24.95 106090 75721 170590 176830 330400 238330 176750 339710 152100 98890 203150 251480 113700 155410 240080 85160 203720 182340 98518 70133 170170 171010 325170 238680 186870 333060 158190 117170 202690 245010 125230 159490 239020 92693 195120 172230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 193300000 1728 2036 1658 3190;3191 2587;2588 2587 2 9606 Homo sapiens 0.006458760179043566 ALSTTASTAAFDK Unmodified 1282.6405 0.64049603 3672 P57772;C9J8T0 EEFSEC Selenocysteine-specific elongation factor yes no 0 0 0 8 0 1 50.23 50.306 2 8.3189E-08 13638 20230619_1888_Aki_TMTPro18x_K_F8 143.96 116.34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1729 3672 1659 3192 2589 2589 1 9606 Homo sapiens 0.01048139772774448 ALSVETEK Unmodified 875.46001 0.46001246 560 A0A024R983;P10155;P10155-3;P10155-5;P10155-4;H0Y9N5 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 0 0 4 0 1 44.17 44.214 2 4.5707E-07 11366 20230619_1883_Aki_TMTPro18x_K_F4 210.26 99.646 136780 72530 152540 159140 222820 244440 178670 186130 200530 160910 228140 261120 228300 198590 211430 108660 265790 264150 126320 67200 154740 154490 224670 239180 183430 193490 204000 167100 233000 258090 232240 202310 217690 119700 253770 249250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88846000 1730 560 1660 3193 2590 2590 1 9606 Homo sapiens 0.01730085906626755 ALSVGNIDDALQCYSEAIK Unmodified 2065.999 0.99902031 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;F5H783;F5GXD8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 7 0 1 63.929 63.958 3 1.7185E-07 19667 20230619_1887_Aki_TMTPro18x_K_F7 100.77 91.115 404250 324530 333790 479800 337080 394830 325460 416190 287050 484150 549810 536420 560600 482060 445340 571150 553210 587030 373220 298360 345810 470310 349810 406010 328270 425510 294310 486720 552000 540530 566300 503740 461540 573040 528500 557270 3 3 3 3 3 3 3 3 2 3 3 3 3 3 3 3 3 3 744770000 1731 2088 1661 3194 2591;2592;2593 2592 3 9606 Homo sapiens 0.008660757759116677 ALSYLYEK Unmodified 985.51205 0.51204804 2607 B4DW13;Q6YP21-3;Q6YP21;A0A0A0MRN7;Q6YP21-2 hCG_23341;CCBL2 Kynurenine--oxoglutarate transaminase 3 yes no 0 0 0 1 0 1 56.751 56.751 3 0.008012 17161 20230619_1880_Aki_TMTPro18x_K_F1 81.548 54.244 21729 13752 18809 23556 19724 29188 22710 20379 31570 27957 31248 40443 35596 34575 25894 43768 42811 62714 20042 12680 19403 23025 20578 28852 22990 21648 31637 28249 32314 40281 35781 36350 27541 44825 40935 59292 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8192600 1732 2607 1662 3195 2594 2594 1 9606 Homo sapiens 0.018712493203679514 ALTALFK Unmodified 762.46398 0.46397563 4650 Q9UBB4;A0A1W2PQD2;Q9UBB4-2;Q7Z524 ATXN10 Ataxin-10 yes no 0 0 0 4.5 0.5 1 1 60.93 60.957 2 0.0062573 18280 20230619_1885_Aki_TMTPro18x_K_F5 134.44 67.444 613700 508290 536930 535210 519210 669490 609420 587390 734710 389620 346870 261530 313770 248130 524330 383440 367650 280160 566930 465640 551670 540310 544250 664810 612840 600440 724830 401210 372600 271440 331250 263600 520020 377830 352670 267520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 605270000 1733 4650 1663 3196;3197 2595;2596 2596 2 9606 Homo sapiens 0.07324220190992037 ALTALLK Unmodified 728.47963 0.47962569 2406 C9J5N1;B3KSP9;Q9BTE6;Q9BTE6-2;Q9BTE6-3;K7EQ85 PTGES3L-AARSD1;AARSD1 Alanyl-tRNA editing protein Aarsd1 yes no 0 0 0 4 0 1 58.738 58.74 2 0.020041 17818 20230619_1883_Aki_TMTPro18x_K_F4 105.12 0 200220 165730 179440 194060 174840 211780 209900 201820 237990 113870 111960 93484 111050 89655 172630 119500 129760 110420 184990 151970 184070 193910 183130 212530 210380 204570 235420 119410 120800 95879 116300 94222 171790 119270 124430 105040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161500000 1734 2406 1664 3198 2597 2597 1 9606 Homo sapiens 0.10452506708043074 ALTDAGCNLNPLQYIK Unmodified 1789.9033 0.90326943 1657 Q8WVM8;A0A7I2V4B8;A0A7I2V5Z4;A0A7I2V3B4;A0A7I2V5I2;Q53GW1;Q8WVM8-2;Q8WVM8-3;A0A7I2V590;A0A7I2V320;A0A7I2V4U2;A0A7I2V3G4;A0A7I2V4R0;B7Z738;B7Z5N7;A0A7I2V448;G3V2M8;A0A7I2V2U5;H0YIZ7 SCFD1 Sec1 family domain-containing protein 1 yes no 0 0 0 2 0 1 63.042 63.051 3 0.00023015 20020 20230619_1881_Aki_TMTPro18x_K_F2 88.73 70.591 37209 33786 37067 33630 35297 45957 37278 37352 43485 35411 34017 39278 35982 29403 35214 40739 35369 35898 34429 30926 37625 34161 36920 45338 37672 38697 43560 36025 35475 39356 36622 31248 35862 40471 33843 34145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22428000 1735 1657 1665 3199 2598 2598 1 9606 Homo sapiens 0.039913924462780415 ALTDSFR Unmodified 808.40792 0.40791731 2734 C9J0K6;P30626-2;P30626;P30626-3;B4DHQ6 SRI Sorcin yes no 0 0 0 7 0 1 44.122 44.205 2 0.054708 11006 20230619_1887_Aki_TMTPro18x_K_F7 84.097 61.475 130080 111690 116140 133560 144670 163070 140750 137940 161520 153400 155180 146680 145920 124000 148380 162360 168930 157060 120210 102430 119670 133440 147990 162080 142770 143070 163140 154030 159070 148480 149360 130690 152040 162210 161350 149280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103880000 1736 2734 1666 3200 2599 2599 1 9606 Homo sapiens -0.003950327164716327 ALTGGIAHLFK Unmodified 1126.6499 0.64987892 425 B4DFL1;E9PEX6;B4DMK9;A0A024R713;P09622;P09622-2;P09622-3 DLD Dihydrolipoyl dehydrogenase;Dihydrolipoyl dehydrogenase, mitochondrial yes no 0 0 0 4.5 0.5 1 1 56.756 56.789 3 4.2915E-05 16544 20230619_1885_Aki_TMTPro18x_K_F5 133.42 95.723 123900 112620 115890 129290 132530 144960 152350 161520 147830 55559 46686 34414 43532 38781 79911 45443 45108 36653 114580 103220 118750 129450 136830 145760 152260 161000 146540 61303 52551 36174 46289 40214 78504 45185 43437 34937 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 645940000 1737 425 1667 3201;3202 2600 2600 1 9606 Homo sapiens 0.09161997639648689 ALTHLEMR Oxidation (M) 985.5015 0.50150012 317 A0A024R534;O94776;O94776-2 MTA2 Metastasis-associated protein MTA2 yes no 0 1 0 5.5 0.5 1 1 35.28 35.351 3 0.026395 7660 20230619_1885_Aki_TMTPro18x_K_F5 60.892 37.849 41060 18952 29616 37257 43687 38851 41921 41228 47990 26433 33652 36726 25990 30344 33902 28706 37017 28464 37776 17542 31285 36105 44178 39208 42533 41573 47892 27853 34905 36600 27214 31374 34475 28887 35328 27069 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81578000 1738 317 1668 3203;3204 2601 2601 193 1 9606 Homo sapiens 0.008169433943066906 ALTHLEMR Unmodified 969.50659 0.5065855 317 A0A024R534;O94776;O94776-2 MTA2 Metastasis-associated protein MTA2 yes no 0 0 0 6.5 0.5 1 1 40.164 40.243 3 1.9949E-07 9341 20230619_1887_Aki_TMTPro18x_K_F7 205.7 131.36 101710 82842 87523 87937 114590 121750 107730 109960 137690 89018 100530 84219 105240 84096 91780 103880 103320 85956 93939 75900 90494 88871 116740 120310 109910 112540 136950 91059 104980 85837 106610 87800 94262 103050 98625 81895 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 96521000 1739 317 1668 3205;3206 2602;2603 2603 2 9606 Homo sapiens 0.020612472569268903 ALTLDQWLEQHK Unmodified 1480.7674 0.76742787 1495 I3L3Z0;I3L1Y8;A0A384P622;Q9HBL8 NMRAL1 NmrA-like family domain-containing protein 1 yes no 0 0 0 8 0 1 60 60.037 3 5.0722E-05 17810 20230619_1888_Aki_TMTPro18x_K_F8 117.63 91.338 74228 80447 94894 89873 62694 80874 93998 76862 94450 73774 74712 79705 74594 64428 181310 66985 64978 76430 68934 73670 94185 89917 68517 82375 92971 78815 95322 74942 77856 80085 81099 67106 175440 68177 63374 72452 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15418000 1740 1495 1669 3207 2604 2604 1 9606 Homo sapiens 0.04627485717810487 ALTLGALTLPLAR Unmodified 1308.8129 0.8129215 644 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8;Q9BSJ8-2 FAM62A;ESYT1 Extended synaptotagmin-1 yes no 0 0 0 7 0 1 63.705 63.737 2 2.5936E-07 19549 20230619_1887_Aki_TMTPro18x_K_F7 173.64 173.64 77211 66476 75680 78658 73111 79219 85286 86904 91435 88191 90603 82690 97026 83243 83934 92380 89019 95566 71406 60954 76986 78472 76455 80254 85497 88278 92773 88895 93222 84255 98200 86347 85909 92847 85169 90711 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228970000 1741 644 1670 3208 2605 2605 1 9606 Homo sapiens 0.17086755970854028 ALTLPGSSENEYIMK Unmodified 1651.8127 0.81272309 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DS32;B4DM67 CSE1L Exportin-2 yes no 0 0 0 6.5 0.5 2 2 59.548 59.602 2;3 1.8515E-08 17969 20230619_1886_Aki_TMTPro18x_K_F6 142.85 125.45 121690 86029 114500 121350 88662 105140 112710 119950 111400 158520 134790 147410 178160 142120 121460 178020 167960 172140 112380 79090 116570 119440 94832 107850 112310 122540 114770 157690 139130 149940 177730 148730 127390 177810 160280 163540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 513540000 1742 1462 1671 3209;3210;3211;3212 2606;2607;2608 2606 3 9606 Homo sapiens 0.012889233980331483 ALTNLPHTDFTLCK Unmodified 1629.8185 0.81847717 3173 K7ERF1;Q9UBQ5;K7ES31;Q9UBQ5-2;U3LUI4;A0A087WVB9;B4DVD7;K7EQM4 EIF3K Eukaryotic translation initiation factor 3 subunit K yes no 0 0 0 2 0 1 55.804 55.823 4 0.015361 16975 20230619_1881_Aki_TMTPro18x_K_F2 65.472 40.536 25330 22474 24458 24997 23737 27795 27866 28085 31863 30680 24588 23087 29932 23457 27128 29222 25385 32791 23428 20593 24914 25085 24841 27904 27980 28733 31964 30641 25797 23797 30232 24516 27553 29463 24356 31080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29199000 1743 3173 1672 3213 2609 2609 1 9606 Homo sapiens 0.02876066700332558 ALTPAFLVCVGSSPFCK Unmodified 1852.9216 0.92156203 3361 O95801 TTC4 Tetratricopeptide repeat protein 4 yes yes 0 0 0 6 0 1 64.148 64.194 3 5.4116E-05 19994 20230619_1886_Aki_TMTPro18x_K_F6 93.909 85.621 49962 40727 39534 47591 45351 50788 48629 48379 58094 41850 39550 35059 44123 32843 43805 48529 40630 37060 46117 37347 41165 47537 46779 51063 49117 49420 57872 42473 41630 35869 44846 34791 44400 47861 38881 35335 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145680000 1744 3361 1673 3214 2610 2610 1 9606 Homo sapiens 0.02921811096643978 ALTPQTAETDAIR Unmodified 1385.7151 0.71505795 2165 A8MUM1;Q53HC9;F8WDX0;F8WB12;F8WDS8;C9J0U9;D3YTH5 TSSC1 Protein TSSC1 yes no 0 0 0 3.5 0.5 1 1 45.201 45.261 2 2.4842E-06 11951 20230619_1882_Aki_TMTPro18x_K_F3 172.61 113.26 73670 66450 70671 82461 75614 84583 83860 76996 92872 94961 93720 102670 113270 92552 99123 104160 106840 112650 68141 60948 72191 81971 78387 85203 84344 79703 94189 95253 97039 103500 114290 96448 101500 104950 102190 106880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81748000 1745 2165 1674 3215;3216 2611;2612 2611 2 9606 Homo sapiens 0.03762902584162475 ALTQFPLPK Unmodified 1013.591 0.59096706 3081 H7BXY3;Q7L2E3-3;Q7L2E3;Q7L2E3-2 DHX30 Putative ATP-dependent RNA helicase DHX30 yes no 0 0 0 4 0 1 58.358 58.36 3 0.0045396 17628 20230619_1883_Aki_TMTPro18x_K_F4 74.165 59.496 28038 22055 28033 30064 29261 30849 33742 25833 34518 28346 29518 28348 31397 25324 33395 29886 28590 29849 25920 20259 28510 29703 30397 31022 33765 26839 34906 28534 30609 28681 32065 26471 33638 29971 27410 28347 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28576000 1746 3081 1675 3217 2613 2613 1 9606 Homo sapiens 0.08471521345313704 ALTQRPDYIK Unmodified 1203.6612 0.66117189 679 B3KMP2;A8KAQ7;A5D8X2;A0A024RBJ3;Q9UJX3-2;Q9UJX3;Q2M2R1;Q4KMX6 ANAPC7 Anaphase-promoting complex subunit 7 yes no 0 0 1 1.5 0.5 1 1 42.94 42.981 3 0.049645 11214 20230619_1881_Aki_TMTPro18x_K_F2 51.531 27.68 131080 98398 120780 131590 135380 151000 146940 146460 171240 124520 132420 112490 128430 99594 133150 149590 141190 108550 121060 90384 123840 130400 139840 151070 148210 149340 171370 126730 137410 114480 131400 105790 135840 147190 134790 103650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135200000 1747 679 1676 3218;3219 2614 2614 1 9606 Homo sapiens 0.06748774943116587 ALTQTGGPHVK Unmodified 1107.6037 0.60365701 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 0 0 1.5 0.5 1 1 37.682 37.712 3 2.6012E-06 8786 20230619_1881_Aki_TMTPro18x_K_F2 139.29 104.56 70307 41155 59473 64456 95189 104910 83925 83064 110700 85687 97154 112950 100870 84866 94880 94785 113520 103100 64812 37917 61890 63652 95817 102470 86054 86413 110660 87346 100590 112410 102570 88983 97605 95569 108360 97874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 532520000 1748 3484 1677 3220;3221 2615 2615 1 9606 Homo sapiens 0.0541593273756007 ALTSADGASEEQSQNDEDNQGSEK Unmodified 2509.0324 0.032441518 623 Q92552-2;D6RH20;A0A024RAJ1;A0A8Q3WKZ8;A0A8Q3SHR4;A0A8Q3WL16;B4DT94;G5EA06;A0A8Q3WKF1;Q92552;A0A8Q3WKI2;A0A8Q3WK88;Q6PKB3;B4DKI9;Q8N6F2 MRPS27 28S ribosomal protein S27, mitochondrial yes no 0 0 0 1 0 2 41.401 41.401 3 2.3526E-05 10755 20230619_1880_Aki_TMTPro18x_K_F1 85.248 81.961 3975.7 3145.3 3240.1 4062.6 5504.7 6830.6 3918.7 5180.6 6470.5 5459.4 6915 6662.9 4300.2 5097.2 5111.1 3214.6 7210.1 5665.9 3669.8 2887.4 3391.9 4060.2 5509.7 6655.9 4124 5408.1 6459.4 5541.9 6956.7 6650.1 4522.1 5206.4 5287.5 3405.3 6867.6 5361.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49733000 1749 623 1678 3222;3223 2616;2617 2616 2 9606 Homo sapiens -0.1617134049984088 ALTSEIALLQSR Unmodified 1300.7351 0.73506511 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 4.5 3.5 1 1 60.322 60.34 2;3 6.7072E-18 17900 20230619_1888_Aki_TMTPro18x_K_F8 182.41 152.74 218880 189850 221630 225860 202770 250980 251690 254230 270610 203590 212930 203230 229510 177160 240040 242930 222520 232680 202490 174080 224700 225530 213610 251890 251530 258140 272090 208550 221930 205630 234100 187160 242960 242480 213140 221070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 322520000 1750 3384 1679 3224;3225 2618;2619 2619 2 9606 Homo sapiens 0.09672698314784611 ALTSFER Unmodified 822.42357 0.42356738 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5;A0A2R8YG21 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 5.5 0.5 1 1 44.101 44.186 2 0.0038271 11289 20230619_1885_Aki_TMTPro18x_K_F5 152.39 92.031 727230 613970 653400 716120 995930 1023200 940310 923300 1150400 897350 981890 1074000 1024400 848690 944300 1112300 1129900 1079800 672010 562930 675450 718820 1005700 1009300 957280 949240 1152700 914140 1017800 1074800 1040500 896690 972780 1111200 1078900 1026100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1178700000 1751 2908 1680 3226;3227 2620;2621 2620 2 9606 Homo sapiens 0.005252538005720453 ALTSFLPAPTQLSQDQLEAEEK Acetyl (Protein N-term) 2457.2275 0.22749992 3859 Q6I9S2;Q13573;G3V3A4;B4DEG7;Q6P151;Q0D2M5;G3V5R3 SNW1 SNW domain-containing protein 1 yes no 1 0 0 3 1.41 1 1 1 1 1 66.092 66.111 3 1.1064E-30 20978 20230619_1882_Aki_TMTPro18x_K_F3 161.22 141.83 45671 42502 43084 49039 47418 52024 47650 49522 56863 59623 53434 55013 57859 54054 56908 67811 56584 58961 42247 38952 44080 49029 48932 52337 48325 51028 57318 59579 55199 56031 58901 56487 57929 67400 54159 56086 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 246010000 1752 3859 1681 3228;3229;3230;3231;3232 2622;2623 2622 2 9606 Homo sapiens 0.057175268338141905 ALTSQLTDEELAQGR Unmodified 1630.8162 0.81622856 1317 A0A1W2PPH1;A0A1W2PQH3;P23368;A0A1W2PR68;A0A1W2PQT3;A0A1W2PQY8 ME2 NAD-dependent malic enzyme, mitochondrial yes no 0 0 0 3 0 1 51.424 51.492 2 7.9587E-09 14802 20230619_1882_Aki_TMTPro18x_K_F3 145.83 116.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1753 1317 1682 3233 2624 2624 1 9606 Homo sapiens 0.02605309496220798 ALTTKPSSLDQFK Unmodified 1434.7718 0.77184455 1941 Q92556;A4D1X5;B4DJV6;Q92556-3;Q92556-2;B4DVN0 ELMO1 Engulfment and cell motility protein 1 yes no 0 0 1 2 0 1 51.379 51.424 3 0.00052664 15093 20230619_1881_Aki_TMTPro18x_K_F2 93.478 70.945 96302 83198 96183 85087 123540 148380 145100 134980 155440 96318 79688 72740 74260 63842 105440 100480 75783 62466 89078 76186 98117 86670 126810 144910 145240 137710 154590 98811 85130 74700 77464 68040 105000 98289 72703 59782 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42013000 1754 1941 1683 3234 2625 2625 1 9606 Homo sapiens 0.07184950140708679 ALTVAHELLCNKPEEEK Unmodified 1979.9986 0.99862638 2225 B2R5U7;Q03701 CEBPZ CCAAT/enhancer-binding protein zeta yes no 0 0 1 6 0 1 54.589 54.666 4 3.9544E-13 15901 20230619_1886_Aki_TMTPro18x_K_F6 155.03 132.16 178400 163320 161670 177930 175260 204010 196420 172900 212310 213550 184870 161860 202250 159630 197690 207450 170820 199410 164960 149600 165950 178860 181650 203650 197230 179910 214430 212130 191620 166640 205530 167380 199690 207220 163900 189380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 695240000 1755 2225 1684 3235 2626 2626 1 9606 Homo sapiens 0.04782700846703847 ALTVPELTQQMFDAK Unmodified 1690.86 0.86000763 3748;3381;983 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;P04350;B4DJ43;B4DE77;B4DFH6 TUBB3;TUBB2C;TUBB4B;TUBB4A Tubulin beta-3 chain;Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 0 0 4.5 3.5 1 1 63.512 63.523 3;4 4.7078E-33 19317 20230619_1888_Aki_TMTPro18x_K_F8 213.67 198.28 252630 209610 231430 227340 155110 185320 194850 208140 210040 276360 247570 269030 275230 237320 269320 297260 270700 309470 233460 192070 235650 227750 168390 191200 194870 212910 214970 275250 253650 272270 279750 249050 274210 298360 259260 293660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 656860000 1756 983;3748;3381 1685 3236;3237 2627;2628 2628 2 9606 Homo sapiens 0.042212026689867344 ALTVPELTQQMFDAK Oxidation (M) 1706.8549 0.85492225 3748;3381;983 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;P04350;B4DJ43;B4DE77;B4DFH6 TUBB3;TUBB2C;TUBB4B;TUBB4A Tubulin beta-3 chain;Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 1 0 7.25 0.829 1 1 2 60.737 60.778 3 7.9259E-11 17888 20230619_1887_Aki_TMTPro18x_K_F7 157.2 42.495 251970 214160 229570 263250 228050 237950 241640 252400 256780 272470 297710 277150 296090 254470 296470 314500 281550 314710 232880 196450 235210 261500 237300 242940 243470 257440 262440 274370 303370 280540 302220 266410 300760 315050 269760 298790 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1009299999.9999999 1757 983;3748;3381 1685 3238;3239;3240;3241 2629;2630;2631;2632 2630 549 4 9606 Homo sapiens 0.029768988063779034 ALTVPELTQQMFDAR Unmodified 1718.8662 0.86615564 2562;3176 B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB6 Tubulin beta-6 chain no no 0 0 0 7.5 0.5 1 1 63.119 63.148 3 1.6075E-10 19148 20230619_1888_Aki_TMTPro18x_K_F8 150.05 99.154 45538 40371 51879 50900 47529 53374 55495 49025 60829 65930 59143 60498 66564 55875 60205 65177 66225 68360 42179 37037 52106 50576 49913 53688 55657 50856 61651 65562 61099 61483 67398 58300 61691 65514 63320 64887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 351680000 1758 2562;3176 1686 3242;3243 2633 2633 1 9606 Homo sapiens 0.0354772090051938 ALTVPELTQQMFDSK Unmodified 1706.8549 0.85492225 1424;3870 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;Q13885 TUBB2B;DKFZp566F223;TUBB2A Tubulin beta-2B chain;Tubulin beta-2A chain no no 0 0 0 5.33 3.09 1 1 1 63.417 63.435 3 8.7911E-20 19869 20230619_1880_Aki_TMTPro18x_K_F1 216.88 50.281 204120 192380 222730 296170 204460 231030 265000 278840 277980 268430 251520 266820 255180 221490 258130 289740 246300 287300 189060 176850 224910 289530 215380 239530 264130 281370 281430 271690 259640 269410 260490 233560 261980 289830 236060 272750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5147600000 1759 1424;3870 1687 3244;3245;3246 2634;2635 2634 2 9606 Homo sapiens 0.029768988063779034 ALTVPELTQQMFDSK Oxidation (M) 1722.8498 0.84983687 1424;3870 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;Q13885 TUBB2B;DKFZp566F223;TUBB2A Tubulin beta-2B chain;Tubulin beta-2A chain no no 0 1 0 7.67 0.471 1 2 60.386 60.425 3 6.7362E-08 17686 20230619_1887_Aki_TMTPro18x_K_F7 132.24 112.4 131960 100030 119730 145590 126540 138560 139670 135880 160950 122490 131020 111050 131420 105470 129860 135960 120950 140680 121870 91972 122900 143110 131290 140540 140700 138700 161450 124240 135740 113200 134000 110650 131630 136380 115940 133490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 269200000 1760 1424;3870 1687 3247;3248;3249 2636;2637;2638 2636 890 3 9606 Homo sapiens 0.01732594943746335 ALTVPELTQQVFDAK Unmodified 1658.8879 0.88793694 1486 P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;Q1KSF8 TUBB;XTP3TPATP1 Tubulin beta chain yes no 0 0 0 7.24 1.66 1 1 4 11 69.127 69.149 3 7.5599E-14 19422 20230619_1888_Aki_TMTPro18x_K_F8 170.56 147.64 335850 201820 321080 349390 232460 246570 187610 256810 304660 404090 323310 325340 267530 321880 408190 474610 393890 416750 309920 185490 325910 339170 243440 252410 195790 263580 304730 397950 328510 330800 279280 334680 412120 470690 377160 396360 11 8 10 11 9 10 10 9 10 11 10 10 10 9 10 9 11 11 73287000000 1761 1486 1688 3250;3251;3252;3253;3254;3255;3256;3257;3258;3259;3260;3261;3262;3263;3264;3265;3266 2639;2640;2641;2642;2643;2644;2645;2646;2647;2648;2649;2650;2651 2649 13 9606 Homo sapiens 0.08484848920738841 ALTYDEK Unmodified 838.40725 0.40724861 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;A0A804HI02;B4DE53;I6L959;Q9BTW9-5;A0A804HIC0;A0A804HL21 TBCD Tubulin-specific chaperone D yes no 0 0 0 3 0 1 43.935 44.005 2 0.039692 11366 20230619_1882_Aki_TMTPro18x_K_F3 85.064 46.826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1762 1722 1689 3267 2652 2652 1 9606 Homo sapiens -0.018418721561829443 ALVADSHPESER Unmodified 1309.6262 0.62624295 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 33.178 33.207 3 2.4794E-32 7244 20230619_1880_Aki_TMTPro18x_K_F1 257.19 236.46 132210 102960 114660 123710 153030 161100 162490 159950 195750 161840 170430 188560 184990 156150 152270 187370 215260 191680 122080 94461 118580 123740 156190 160060 164240 163510 196450 164330 176780 189090 186860 163790 159070 187930 205190 182100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 362330000 1763 2337;3778;3779 1690 3268;3269 2653;2654 2653 2 9606 Homo sapiens -0.01618512655500126 ALVAESHNMK Oxidation (M) 1114.5441 0.54409322 3122 Q92541;I7GPQ7 RTF1 RNA polymerase-associated protein RTF1 homolog yes no 0 1 0 5.5 0.5 1 1 35.243 35.314 3 0.017502 7693 20230619_1885_Aki_TMTPro18x_K_F5 60.398 43.372 16639 9866.2 13913 17551 18519 20014 18176 17274 23285 18917 19336 17841 21710 18474 17454 20910 77065 23171 15338 9105.1 14452 17105 18874 19977 18494 17883 23268 19014 20114 18192 21969 19171 21102 21090 72786 22182 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40668000 1764 3122 1691 3270;3271 2655 2655 1814 1 9606 Homo sapiens -0.008597062681246825 ALVAESHNMK Unmodified 1098.5492 0.5491786 3122 Q92541;I7GPQ7 RTF1 RNA polymerase-associated protein RTF1 homolog yes no 0 0 0 6 0 1 39.714 39.802 3 0.0022794 9441 20230619_1886_Aki_TMTPro18x_K_F6 79.974 61.662 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1765 3122 1691 3272 2656 2656 1 9606 Homo sapiens 0.003845975945068858 ALVATPGK Unmodified 755.45414 0.45413923 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;A0A7I2V2S8 NCL Nucleolin yes no 0 0 0 2.8 2.64 2 2 1 44.159 44.2 2;3 0.00072146 11760 20230619_1881_Aki_TMTPro18x_K_F2 111.82 93.085 729090 426960 661210 730590 811550 949910 796500 829220 1031900 642340 725110 707660 756200 651860 809490 596030 882850 736610 672450 393830 680080 715110 831650 940400 811030 850330 1024400 662070 759850 713590 773610 671490 824950 608510 842990 698690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1775299999.9999998 1766 1658 1692 3273;3274;3275;3276;3277 2657;2658;2659 2658 3 9606 Homo sapiens 0.06663032185610973 ALVAYYQK Unmodified 954.51747 0.51746776 3200 M0R210;P62249;M0R3H0;M0R1M5;M0QX76 RPS16 40S ribosomal protein S16 yes no 0 0 0 2.8 0.748 2 2 1 51.41 51.462 2;3 0.0012997 14749 20230619_1882_Aki_TMTPro18x_K_F3 160.69 53.931 842760 681020 708320 667050 928770 1102500 924610 912410 1154700 439000 411810 387990 435560 336630 580760 429410 430260 346550 778190 623560 733960 680930 948470 1077400 938840 932230 1131600 469000 458770 394980 450700 353920 578820 425950 412540 330340 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1129800000 1767 3200 1693 3278;3279;3280;3281;3282 2660;2661;2662 2662 3 9606 Homo sapiens 0.03838972902849491 ALVDGPCTQVR Unmodified 1214.6078 0.60775611 1898 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 RPL14 60S ribosomal protein L14 yes no 0 0 0 5 0.816 1 1 1 42.541 42.615 2 4.4373E-17 10612 20230619_1885_Aki_TMTPro18x_K_F5 236.89 199.34 713260 554440 634990 617080 644890 768070 728830 698910 763140 666070 427580 452070 757650 490830 516660 790900 758800 676840 658730 508290 651680 620280 671890 763610 730860 717760 762810 668710 469060 470320 750780 521710 544420 782620 723100 644380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2583200000 1768 1898 1694 3283;3284;3285 2663;2664 2663 2 9606 Homo sapiens 0.009036541689738442 ALVDHENVISCPHLGASTK Unmodified 2047.0157 0.015673424 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;A0A286YFA2;A0A286YFL2;Q9UMY2;Q8N5M8;A0A286YF78 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 6.5 0.5 1 1 45.353 45.439 4 2.3083E-24 11477 20230619_1887_Aki_TMTPro18x_K_F7 195.39 181.97 505530 417180 473950 539080 437600 534430 450620 422040 397360 556230 651910 969420 545430 511670 735780 605640 817850 1096700 467230 382920 483910 534130 458070 538110 452390 443090 418440 566830 654830 948340 569460 548090 748730 634790 783650 1035400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1467199999.9999998 1769 1334 1695 3286;3287 2665 2665 1 9606 Homo sapiens 0.03404621452500578 ALVDHHDAEVK Unmodified 1232.6149 0.61494998 1046 A0A0J9YWR7;H7C2M7;A0A0J9YXE4;Q8N2F6-6;Q8N2F6-4;Q8N2F6-5;Q8N2F6-3;Q8N2F6-2;Q8N2F6 ARMC10 Armadillo repeat-containing protein 10 yes no 0 0 0 3 0 1 35.543 35.601 4 4.7531E-05 7804 20230619_1882_Aki_TMTPro18x_K_F3 136.81 106.37 65978 47819 60829 71285 80057 82264 82867 85203 103360 58949 85042 87019 72038 64911 78179 61632 93683 83107 60925 43986 62576 70173 81699 82396 83992 86144 103210 61899 87570 86322 74277 67506 80145 63250 89412 78747 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55312000 1770 1046 1696 3288 2666 2666 1 9606 Homo sapiens 0.007947100410319763 ALVEEALAQR Unmodified 1098.6033 0.60332266 4544 Q9HB07;F8VR84;Q8WYI2;F8VQQ3;Q96CT6 C12orf10;MST024 UPF0160 protein MYG1, mitochondrial yes no 0 0 0 5 0 1 53.919 53.989 2 0.0010169 15440 20230619_1885_Aki_TMTPro18x_K_F5 113.71 76.331 128110 103010 120290 133600 117300 146680 152440 143760 173000 171430 156250 152800 195330 166610 149450 206450 189650 199560 118390 94567 122920 132560 123180 147200 152260 147810 174490 171260 162760 156520 195990 173540 155310 206260 181140 189580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150790000 1771 4544 1697 3289 2667 2667 1 9606 Homo sapiens 0.05796513017708094 ALVEFTNSPDCLSK Unmodified 1579.7552 0.75520821 2083 A8K607;Q9UIA9;E7ESC6;H0YBE1 XPO7 Exportin-7 yes no 0 0 0 6.5 0.5 1 1 58.112 58.173 3 1.0699E-08 17345 20230619_1886_Aki_TMTPro18x_K_F6 153.39 138.92 208610 160630 175600 185800 169770 198770 206870 183250 187200 245300 215220 212670 261050 220670 208220 259840 244390 280620 192570 147320 181120 185780 177880 199680 205830 189990 193290 243530 221490 217650 262470 229540 214950 261490 233730 266180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 234580000 1772 2083 1698 3290;3291 2668;2669 2668 2 9606 Homo sapiens -0.011479188075327329 ALVEMQDVVAELLR Unmodified 1584.8545 0.85452832 485 A0A024R816;Q9C0H2-2;Q9C0H2;Q9C0H2-4;Q9C0H2-3 TTYH3 Protein tweety homolog;Protein tweety homolog 3 yes no 0 0 0 7 0 1 67.889 67.91 3 0.017974 21291 20230619_1887_Aki_TMTPro18x_K_F7 59.185 42.159 2354.6 826.54 2493.6 3369.9 2912.4 3000.2 1875.3 2494.9 2814.7 3427.4 2110.7 2984.8 3033.1 2574.2 2882.9 2646.8 2008.9 2340.4 2170.6 779.67 2531.6 3181.9 2964.4 3046 1982.8 2608.4 2794.7 3399.6 2245.5 3029.7 3058.2 2672.7 2884.7 2643.1 1932.9 2224.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1311200 1773 485 1699 3292 2670 2670 1 9606 Homo sapiens 0.08549523877218235 ALVFQPVAELK Unmodified 1213.7071 0.70705945 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162;Q7KYX9;A0A0S2Z4A8;Q7Z683 PFKM;DKFZp779O048 ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 1.5 0.5 2 2 61.935 61.939 2;3 3.843E-09 19266 20230619_1880_Aki_TMTPro18x_K_F1 214.58 145.16 137610 112710 139450 147570 98566 123540 131910 122180 135850 144550 164740 170610 156060 146390 157140 175480 197840 230020 127260 103470 140950 145850 106600 126690 131280 125630 139310 145660 167360 171210 159740 153370 162130 178840 189120 217780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 963720000 1774 116 1700 3293;3294;3295;3296 2671;2672 2671 2 9606 Homo sapiens 0.1087542012535323 ALVGDFMNR Unmodified 1021.5015 0.50150012 3821 Q6AWA4;Q12789;Q12789-3;H3BRD0 DKFZp686O0870;GTF3C1 General transcription factor 3C polypeptide 1 yes no 0 0 0 8 0 1 54.1 54.171 2 0.041606 15345 20230619_1888_Aki_TMTPro18x_K_F8 81.215 65.776 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1775 3821 1701 3297 2673 2673 1 9606 Homo sapiens -0.008390566056846183 ALVHERDEAAYGELR Unmodified 1727.8591 0.85909643 892 Q86SZ7;Q2TNB3;A0A087X1Z3;Q9UL46;H0YM70 PSME2 Proteasome activator complex subunit 2 yes no 0 0 1 3 0 1 38.796 38.85 4 1.3679E-13 9099 20230619_1882_Aki_TMTPro18x_K_F3 175.38 112.2 174920 153940 168220 192450 190330 194230 200860 190290 200060 244070 236800 247920 255530 211320 205960 266290 277160 269720 161770 141220 171910 191200 196070 196250 201910 196160 205590 243800 242090 250230 257860 222140 214570 266720 264450 256170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 258270000 1776 892 1702 3298 2674 2674 1 9606 Homo sapiens 0.024281243443510903 ALVHQLSNESR Unmodified 1252.6524 0.65239812 4515 Q9H4L5-2;Q9H4L5;Q9H4L5-6;Q9H4L5-5;Q9H4L5-4;Q9H4L5-3;Q9H4L5-8;Q9H4L5-7 OSBPL3 Oxysterol-binding protein-related protein 3 yes no 0 0 0 7 0 1 37.808 37.872 3 2.6333E-05 8416 20230619_1887_Aki_TMTPro18x_K_F7 138.51 114.13 34004 27743 33254 30132 37338 34061 33183 35297 45519 44062 46770 38217 43631 35525 35452 49103 51164 42677 31436 25423 33872 30311 38317 34206 34095 36190 45728 43890 47714 39014 44247 37457 37134 48725 48743 40634 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31147000 1777 4515 1703 3299 2675 2675 1 9606 Homo sapiens 0.036178013066546555 ALVISGR Unmodified 714.43882 0.43882351 2690 B7Z592;Q8WU90;Q8WU90-2 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes no 0 0 0 1.5 0.5 1 1 41.304 41.342 2 0.084335 10428 20230619_1881_Aki_TMTPro18x_K_F2 72.138 14.675 477140 403860 418730 463940 480310 531140 516460 485580 604160 502690 509190 505680 595140 439130 452480 640280 595990 519550 440850 370230 431450 464510 495240 531040 521180 499770 606590 507450 530500 511320 597640 465910 471550 632870 568320 495030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 256720000 1778 2690 1704 3300;3301 2676 2676 1 9606 Homo sapiens 0.07018165388421949 ALVIVMGK Oxidation (M) 845.50446 0.50446024 2552 C9J0J7;G5E9Q6;B4DNH1;D3DNI2;P35080-2 PFN2 Profilin;Profilin-2 yes no 0 1 0 3 0 1 51.47 51.535 3 0.0023933 14847 20230619_1882_Aki_TMTPro18x_K_F3 97.068 64.227 52339 42277 38769 52921 62138 56391 48953 51270 54052 44818 52246 51699 43001 44238 55348 47677 48131 52383 48288 38796 40927 52590 62284 56674 50280 52569 54686 45865 53308 51929 44812 46027 55626 48149 46151 49688 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71562000 1779 2552 1705 3302 2677 2677 1548 1 9606 Homo sapiens 0.07552818519127413 ALVIVMGK Unmodified 829.50955 0.50954561 2552 C9J0J7;G5E9Q6;B4DNH1;D3DNI2;P35080-2 PFN2 Profilin;Profilin-2 yes no 0 0 0 4.5 0.5 1 1 59.06 59.088 3 0.018356 17897 20230619_1883_Aki_TMTPro18x_K_F4 68.915 52.761 57910 54376 60315 55861 54282 58286 50923 50728 63153 56393 55209 63441 65898 48873 61508 65743 66368 60999 53615 49781 60936 56364 56773 58622 51952 52516 63343 56917 57548 63571 66669 51805 62910 65520 63417 58007 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 299700000 1780 2552 1705 3303;3304 2678 2678 1 9606 Homo sapiens 0.08797122381736244 ALVLDCHYPEDEVGQEDEAESDIFSIR Unmodified 3135.3979 0.39788908 2086 A8K651;Q07021;I3L3Q7;I3L3B0 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes no 0 0 0 2 1 1 1 62.203 62.218 3 2.1992999999999996E-21 19343 20230619_1882_Aki_TMTPro18x_K_F3 167.99 161.56 35852 26598 35299 36089 30310 36056 38453 39317 38765 44594 44820 42229 52432 42810 43866 56046 46754 53459 33128 24437 35839 35668 32109 36525 38328 40078 39747 44701 46015 43033 52849 44850 44986 55925 44752 50778 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 40344000 1781 2086 1706 3305;3306 2679;2680;2681;2682 2682 4 9606 Homo sapiens -0.08439395087589219 ALVNCQYSSATFSTGER Unmodified 1889.8578 0.8577758 4560 Q9NPD3;A0A994J4D9;E9PI41 EXOSC4 Exosome complex component RRP41 yes no 0 0 0 8 0 1 49.221 49.293 3 3.5798E-06 13226 20230619_1888_Aki_TMTPro18x_K_F8 101.05 99.186 66136 59725 75400 76126 56578 63661 65532 64671 92133 93268 87291 74213 80509 75268 75066 91592 82076 95044 61265 54795 75536 75379 60529 65355 66415 66782 92181 92171 89388 76270 82178 78471 76914 91920 78552 90189 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 347980000 1782 4560 1707 3307 2683 2683 1 9606 Homo sapiens -0.05155877806760145 ALVNQLHER Unmodified 1078.5883 0.5883413 1223 Q9HCC0;Q9HCC0-2;A0A804HLJ9;A0A140VK29;A0A804HKE8;A0A804HJ24;A0A804HK37;A0A804HJ84;A0A804HHS4;D6RDF7;A0A0S2Z5R4;A0A804HIH3;A0A804HJW5;D6R9R1;A0A0D9SFE9;A0A804HJW2;A0A0G2JM88 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 6.5 0.5 1 1 37.202 37.269 3 1.349E-06 8201 20230619_1887_Aki_TMTPro18x_K_F7 162.88 117.56 68766 50300 63382 67277 89047 94226 83055 89557 110710 71304 78086 77741 81386 71678 77117 69327 89610 77904 63502 46209 65243 66888 90328 93112 84913 91279 109800 73319 81793 78428 82799 74014 79130 70224 85536 73946 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138500000 1783 1223 1708 3308;3309 2684 2684 1 9606 Homo sapiens 0.05219065940377732 ALVQNDTLLQVK Unmodified 1340.7664 0.76636524 4293;1866 Q92522;A0A994J4R3 H1FX Histone H1x no no 0 0 0 5.33 3.09 1 1 1 57.02 57.074 2;3 7.9062E-18 17289 20230619_1880_Aki_TMTPro18x_K_F1 226.29 191.48 326290 263690 308430 328950 242240 273610 323140 320530 294640 280510 301220 270970 320960 249870 295090 306810 302890 305970 301550 241960 313940 326200 258970 281950 320390 323270 301970 285270 309460 275030 325540 261590 301020 307330 289750 290610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3813299999.9999995 1784 4293;1866 1709 3310;3311;3312 2685;2686;2687 2685 3 9606 Homo sapiens 0.10961271348878654 ALVSAQWVAEALR Unmodified 1412.7776 0.77759863 1209 A0A140VJX3;P25325;P25325-2;Q2VEU1;B1AH49;Q59HD5;Q2VEU0 MPST 3-mercaptopyruvate sulfurtransferase;Sulfurtransferase yes no 0 0 0 3 0 1 63.411 63.441 2 6.5132E-15 19846 20230619_1882_Aki_TMTPro18x_K_F3 194.8 149.42 345730 315960 355270 336830 372410 433210 388240 376840 444790 224840 219610 201220 209040 188230 326050 255480 250560 191890 319990 289370 360280 339880 386090 429470 392170 384820 440280 235120 235630 205210 219390 198020 324920 252360 240060 183150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 203760000 1785 1209 1710 3313 2688;2689 2688 2 9606 Homo sapiens 0.08772093443030826 ALVSEWKEPQAK Unmodified 1384.7351 0.73506511 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5 DDB1 DNA damage-binding protein 1 yes no 0 0 1 8 0 1 50.362 50.438 3 2.0214E-07 13698 20230619_1888_Aki_TMTPro18x_K_F8 164.48 146.35 284560 264170 320680 281230 272370 323130 324130 305420 284050 346860 369700 282140 330660 234920 354590 240650 251700 185090 263620 241930 321820 283390 288030 323230 322780 314330 295250 346190 373090 287820 339290 244380 353810 239100 241360 176630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285410000 1786 1710 1711 3314 2690 2690 1 9606 Homo sapiens 0.0580869831480868 ALVSGKPAESSAVAATEK Unmodified 1714.9101 0.91012895 3346 Q6FG42;Q32Q14;O95182;Q6IB89 NDUFA7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes no 0 0 1 7 0 1 45.843 45.93 4 3.7612E-09 11714 20230619_1887_Aki_TMTPro18x_K_F7 130.27 112.78 60188 50504 58223 66453 73098 82988 74378 70597 85589 68056 74561 68107 76505 61260 64879 79861 83126 69629 55648 46362 59592 65988 74815 82360 75240 72917 86071 68965 77050 68965 77466 64403 67263 79341 79264 66292 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96167000 1787 3346 1712 3315 2691 2691 1 9606 Homo sapiens 0.08127028598505603 ALVTECLEQCGR Unmodified 1434.6595 0.65953368 4288 Q8WXH0-2;Q8WXH0;D4YW74;G3V5X4 SYNE2;TROPH Nesprin-2 yes no 0 0 0 5 0 1 49.102 49.178 2 0.049347 13398 20230619_1885_Aki_TMTPro18x_K_F5 58.699 49.836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1788 4288 1713 3316 2692 2692 1 9606 Homo sapiens -0.04040970199457661 ALVTGYFMQVAHLER Oxidation (M) 1749.8872 0.88722543 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 1 0 3 0 1 59.908 59.937 3 6.4566E-09 18468 20230619_1882_Aki_TMTPro18x_K_F3 144.4 130.81 61308 47514 57774 63441 59473 69104 60357 61210 71772 67351 60240 60877 59139 58593 67484 67794 65297 66751 56644 43638 59042 62815 61716 69251 61169 63244 72032 67563 62331 62011 60852 60972 68357 67927 62507 63407 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38819000 1789 3246 1714 3317 2693;2694 2694 1911 2 9606 Homo sapiens 0.04227731000037238 ALVTGYFMQVAHLER Unmodified 1733.8923 0.89231081 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 4 0 1 62.075 62.079 3 1.7707E-10 19219 20230619_1883_Aki_TMTPro18x_K_F4 148.03 114.82 45674 32990 43652 40833 35761 45282 48648 39722 52061 50004 52339 44616 58448 39301 48300 54195 48264 52575 42187 30283 44387 40660 38161 45313 48399 41264 52848 49835 53896 45393 58898 41558 49325 54111 46209 49938 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86304000 1790 3246 1714 3318 2695 2695 1 9606 Homo sapiens 0.05472034862646069 ALVYGHHGDPAK Unmodified 1263.636 0.63601977 2597 B4DV18;Q9BV79 MECR Trans-2-enoyl-CoA reductase, mitochondrial yes no 0 0 0 6.5 0.5 1 1 35.248 35.31 4 4.9516E-07 7451 20230619_1887_Aki_TMTPro18x_K_F7 157.68 129.5 48305 34749 43957 45202 51973 52418 59204 58494 63965 56359 75981 79490 69084 59684 69204 69629 71898 72894 44600 31915 45146 44894 53510 52601 59420 59282 65309 57766 77120 78985 70730 62722 70521 70000 68772 69197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68682000 1791 2597 1715 3319;3320 2696 2696 1 9606 Homo sapiens 0.014747201405725718 ALWAASR Unmodified 773.41842 0.41842242 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 3 0 1 44.815 44.888 2 0.026043 11806 20230619_1882_Aki_TMTPro18x_K_F3 97.075 55.953 83528 73435 67798 63958 104670 154710 94181 91790 179130 34899 33470 34803 44129 37368 42756 38491 39565 37621 77152 67158 70769 66567 106060 148020 98011 96533 171410 38705 41651 35477 44708 38523 43299 38635 37873 35749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36142000 1792 4386 1716 3321 2697 2697 1 9606 Homo sapiens 0.022649947286026872 ALWADSGIQNAYDR Unmodified 1578.7427 0.74266969 526 A0A024R8M0;Q14344;Q14344-2;B4DWV9 GNA13 Guanine nucleotide-binding protein subunit alpha-13 yes no 0 0 0 5.5 0.5 1 1 55.872 55.941 3 2.3285E-16 16448 20230619_1886_Aki_TMTPro18x_K_F6 157.5 146.24 29446 27549 26370 30012 25294 29713 29104 36138 30269 28286 31157 32274 33750 29224 31781 34472 33047 32871 27229 25234 27051 30120 26479 30218 29186 36246 30801 29116 32052 32495 34272 30515 32436 34463 31605 31239 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85940000 1793 526 1717 3322;3323 2698 2698 1 9606 Homo sapiens -0.023551941555524536 ALWCSEDK Unmodified 1007.4382 0.43823117 4727 Q9Y3F4;Q9Y3F4-2;B0AZV0 STRAP Serine-threonine kinase receptor-associated protein yes no 0 0 0 4.5 0.5 1 1 49.541 49.597 2 0.0017128 13777 20230619_1883_Aki_TMTPro18x_K_F4 138.26 106.89 197700 173420 200190 190900 210550 235020 229480 232790 257680 248750 245120 234800 270110 218150 211630 255240 254850 250470 182910 158900 203270 192040 218400 234300 231180 238310 260480 250130 253050 238470 272050 227610 218850 255520 243390 237960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 226600000 1794 4727 1718 3324;3325 2699;2700 2699 2 9606 Homo sapiens -0.06519042113598061 ALWEDEGVR Unmodified 1073.5142 0.5141733 1073 A0A0S2Z3H8;A0A7I2V5R6;Q5JWF2;Q5JWF2-2;P63092-4;P63092-3;P63092;P63092-2;Q5JWE9;A0A0S2Z3S5;Q14455;A0A590UJQ9;A0A590UK28;Q5FWY2;A0A804HIH4;B0AZR9;A0A0A0MR13;A0A590UJF0;A0A590UJS2;A0A590UJC9 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short yes no 0 0 0 1.5 0.5 1 1 49.112 49.144 2 4.432E-05 14052 20230619_1881_Aki_TMTPro18x_K_F2 190.52 155.71 544350 518880 621960 560140 559610 616730 702130 689060 684900 710920 693570 694440 828210 638540 692710 851610 769820 776060 504460 475210 624130 563560 589560 621190 699310 699420 699410 716610 717130 704180 834160 672020 711910 847670 735860 737890 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 379550000 1795 1073 1719 3326;3327 2701;2702;2703 2703 3 9606 Homo sapiens -0.019643219418185254 ALWFQGR Unmodified 876.46062 0.46062159 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;H0Y8T4;P43243-2;B4DRS1;B3KM87;Q5CZA7;B4DF66;Q9H4N1 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 yes no 0 0 0 4.5 0.5 1 1 53.302 53.348 2 0.0073299 15182 20230619_1885_Aki_TMTPro18x_K_F5 126.04 94.734 1460700 1274500 1378800 1419800 1388600 1764700 1563500 1668800 1927800 1054800 972360 873130 1123000 884820 1219200 1331300 1148200 996940 1350600 1167900 1408200 1426900 1448800 1755500 1577200 1694500 1902700 1095100 1049000 896820 1145900 935920 1234700 1311600 1098300 950990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 687070000 1796 1059 1720 3328;3329 2704;2705 2705 2 9606 Homo sapiens 0.01744970136996926 ALWQSVQEQSAR Unmodified 1401.7001 0.70007659 4366 Q96IR7 HPDL 4-hydroxyphenylpyruvate dioxygenase-like protein yes yes 0 0 0 8 0 1 50.258 50.334 2 3.1100000000000004E-35 13650 20230619_1888_Aki_TMTPro18x_K_F8 252.14 194.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1797 4366 1721 3330 2706 2706 1 9606 Homo sapiens 0.015294555068521731 ALYDTFSAFGNILSCK Unmodified 1805.8658 0.86582129 566;1667 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;P11940-2;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;A0A024R9E2;E5RJB9;E5RGH3;Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;H0Y5F5;B1ANR1;H0YEQ8 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 4 no no 0 0 0 4.5 0.5 1 1 65.755 65.783 3 3.3236E-08 20735 20230619_1883_Aki_TMTPro18x_K_F4 130.98 122.38 49773 35177 43932 49856 48153 47429 45679 45048 55162 57626 52974 49771 70333 48866 44405 60703 52466 69609 45939 32341 45199 49093 49601 48099 46504 46532 55631 57332 55160 50864 69923 51145 46150 61252 50240 65958 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 483670000 1798 566;1667 1722 3331;3332 2707;2708 2707 2 9606 Homo sapiens -0.004876988193245779 ALYDYEGQEHDELSFK Unmodified 1942.8585 0.85848731 1156 Q6FIA3;A0A0U1RR22;Q9UNF0-2;Q9UNF0;H0Y923 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes no 0 0 0 3 1 1 1 55.062 55.074 3 2.1953E-06 16289 20230619_1883_Aki_TMTPro18x_K_F4 117.4 100.32 45030 40601 53242 51147 43649 51783 51891 45406 51139 61040 60898 65566 66869 55204 58986 78669 72602 72728 41728 37245 53249 50799 46310 52167 51841 47279 52581 60974 62318 66015 67683 58522 60981 78282 69334 69140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35196000 1799 1156 1723 3333;3334 2709;2710 2710 2 9606 Homo sapiens -0.0752275988609199 ALYEHLTAK Unmodified 1044.5604 0.56039521 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HHY9 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 4.5 3.5 1 1 45.715 45.734 3 2.4139E-05 11747 20230619_1888_Aki_TMTPro18x_K_F8 157.99 82.7 150160 116720 138750 148920 154130 155330 156930 157250 148710 172350 180620 195480 183080 147660 159100 174410 192420 207780 138720 107150 142160 147830 158820 156660 157880 160940 153370 173970 184020 195690 185590 155390 164130 176650 183890 196940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 337680000 1800 1723 1724 3335;3336 2711;2712 2712 2 9606 Homo sapiens 0.03989742960266085 ALYEQEIR Unmodified 1020.524 0.52400971 2388 B3KQI5;P07196;I6L9F6;B3KXJ0;Q8TCR7 NEFL;DKFZp761K0922 Neurofilament light polypeptide no no 0 0 0 2.5 0.5 1 1 43.759 43.835 2 0.0027237 11281 20230619_1882_Aki_TMTPro18x_K_F3 122.18 89.339 397300 353400 368750 280100 147580 184120 196120 175420 214540 346780 427560 423920 405690 353740 376820 440620 441710 451660 367360 322970 372960 288280 172390 193730 196130 184710 226290 343400 427640 424530 413370 371710 387630 441820 422070 428840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 213630000 1801 2388 1725 3337;3338 2713;2714 2714 2 9606 Homo sapiens 0.014568660635632114 ALYEQNQSDVNEAK Unmodified 1607.7427 0.74272927 1801 A0A8Q3WM37;A0A8Q3WLL7;A0A8Q3WLK7;B4DGH0;A0A8Q3SIY5;A0A8Q3SJ10;A0A8Q3WMM5;Q14691 GINS1 DNA replication complex GINS protein PSF1 yes no 0 0 0 2.5 0.5 1 1 44.275 44.352 3 4.6928E-07 11562 20230619_1882_Aki_TMTPro18x_K_F3 136.24 117.5 91409 72851 88909 83105 94319 103210 91492 93441 111600 108260 118630 114490 126110 105760 110380 123780 123920 122000 84491 66795 90562 83384 97495 102640 93073 96509 112850 108830 121670 115690 127710 110340 113340 123970 118420 115910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166640000 1802 1801 1726 3339;3340 2715;2716 2716 2 9606 Homo sapiens -0.03683238946223355 ALYESELADAR Unmodified 1236.5986 0.59863121 1473 Q03252;A0A384NPH0 LMNB2 Lamin-B2 yes no 0 0 0 2.5 0.5 1 1 48.575 48.647 2 4.0301E-17 13785 20230619_1881_Aki_TMTPro18x_K_F2 237.44 197.79 242110 190420 219050 246140 196990 231500 276950 261220 293790 302760 322170 336270 343480 293520 290150 345700 346380 367180 223650 174820 224330 243820 208630 235840 275110 266010 299480 304710 330210 338390 347380 306950 299400 347600 331010 348450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 590880000 1803 1473 1727 3341;3342 2717;2718 2717 2 9606 Homo sapiens -0.010204159157410686 ALYESELADARR Unmodified 1392.6997 0.69974224 1473 Q03252;A0A384NPH0 LMNB2 Lamin-B2 yes no 0 0 1 3.5 0.5 1 1 43.188 43.242 3 5.3291E-24 10957 20230619_1883_Aki_TMTPro18x_K_F4 231.54 177.06 153390 143180 144550 141870 157920 156550 176320 173760 190560 154660 162650 139110 170830 133190 167770 163030 164960 132730 141900 131040 147750 143720 163340 157710 177140 175790 192110 156900 168430 141860 173860 139190 170460 161700 157640 126500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178120000 1804 1473 1728 3343;3344 2719 2719 1 9606 Homo sapiens 0.019100357869547224 ALYETELADAR Unmodified 1250.6143 0.61428128 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 LMNB1 Lamin-B1 yes no 0 0 0 2 0.816 1 1 1 49.659 49.705 2 7.1183E-06 13965 20230619_1882_Aki_TMTPro18x_K_F3 177.58 99.2 728330 582230 733290 734330 675750 846130 659500 599390 684180 957140 896950 899750 988080 849560 790900 1010000 928970 1033300 673410 534350 743610 730390 706780 841330 667170 639210 705610 946260 914100 914100 996200 886610 816580 1013100 888220 980840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2240400000 1805 3482 1729 3345;3346;3347 2720;2721 2721 2 9606 Homo sapiens -0.0010012939869739057 ALYETELADARR Unmodified 1406.7154 0.7153923 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 LMNB1 Lamin-B1 yes no 0 0 1 3.5 0.5 1 1 44.07 44.127 3 1.4451E-40 11316 20230619_1883_Aki_TMTPro18x_K_F4 254.07 208.77 310140 303840 305480 270160 340360 303660 253670 263390 285530 293870 308110 261060 304340 234140 327080 329180 317060 276210 287100 277810 310820 276390 347950 304090 262040 272650 290210 294370 314670 265870 311620 247510 331640 326320 303170 263050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 404810000 1806 3482 1730 3348;3349 2722;2723 2723 2 9606 Homo sapiens 0.028303223039984005 ALYHTEER Unmodified 1017.488 0.48795855 1998 A8K0P2;A0A0C4DGB9 PPA2 yes no 0 0 0 2.5 0.5 1 1 30.562 30.642 3 4.5128E-05 5951 20230619_1881_Aki_TMTPro18x_K_F2 153.04 98.486 60557 46727 65142 71300 105600 89414 92996 93903 97155 73126 91065 96466 89755 75821 103330 76847 101500 102440 56010 42982 66417 70197 105900 89174 94597 95053 98429 75742 93747 96162 92286 78973 104580 78728 97141 97024 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60056000 1807 1998 1731 3350;3351 2724;2725 2724 2 9606 Homo sapiens -0.020085911132809997 ALYLIATNGTPELQNPEK Unmodified 1971.0313 0.031306714 3839 Q13177;A8K5M4;Q9Y6B5;A8KAN3;A0A024R5P0;Q13153-2;Q13153;B3KNX7;E9PM17;B7Z3K0;B7Z302;H0YCG5 PAK2;PAK1 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 0 0 0 8 0 1 61.906 61.935 3 7.0281E-07 18564 20230619_1888_Aki_TMTPro18x_K_F8 114.01 94.259 54206 41567 48402 53831 58667 75683 57411 51884 93568 52802 51528 50039 59988 51368 60913 50727 51950 60004 50059 38165 49852 53607 60268 74290 59017 54685 91485 53365 55210 50967 61009 52933 61374 51544 49848 56864 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66048000 1808 3839 1732 3352 2726 2726 1 9606 Homo sapiens 0.0846323124119408 ALYPSSVGQPFQGAYLEINK Unmodified 2181.1106 0.11061967 2174 E9PDF6;B0I1S9;O43795-2;O43795;B3KQI2;H7C2Y7 MYO1B Unconventional myosin-Ib yes no 0 0 0 2 0 1 62.564 62.573 3 0.00010775 19772 20230619_1881_Aki_TMTPro18x_K_F2 73.928 66.395 33205 19248 33759 32596 25635 38946 34350 39638 36085 41034 37912 33939 41384 32089 39982 43081 42983 44219 30652 17753 34132 31894 27583 38863 34213 40454 36765 41164 38944 34737 42041 33771 40864 43167 41105 41983 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55731000 1809 2174 1733 3353 2727 2727 1 9606 Homo sapiens 0.0673087819536704 ALYPVIPR Unmodified 927.55419 0.55418762 4270 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 3 0 1 51.885 51.95 2 0.078245 15051 20230619_1882_Aki_TMTPro18x_K_F3 77.374 55.226 181100 155910 160420 179320 183890 213990 218210 199670 239850 163380 157390 143840 170190 141670 182880 183340 168270 163430 167350 142920 165200 179640 190200 213420 218540 204040 239620 166640 165920 146990 173910 148430 184940 182470 161110 155460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93932000 1810 4270 1734 3354 2728 2728 1 9606 Homo sapiens 0.08751269519427751 ALYQEHAK Unmodified 958.48723 0.48723027 4745 Q9Y5B6-2;Q9Y5B6;B3KY25;B3KSC0 PAXBP1 PAX3- and PAX7-binding protein 1 yes no 0 0 0 6 0 1 36.077 36.138 3 0.00065977 8006 20230619_1886_Aki_TMTPro18x_K_F6 128.36 66.399 79025 53184 79449 77837 97964 101510 93239 86114 105510 88856 112290 102280 103130 83705 97572 68814 115530 102350 72994 48926 80934 76864 100120 100490 94657 89125 106990 90104 114420 102560 105250 86238 100130 71373 110270 96909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66267000 1811 4745 1735 3355 2729 2729 1 9606 Homo sapiens 0.006326142376565258 ALYSDPK Unmodified 792.40177 0.4017693 4545 Q9HB40;B4DP22;I3L4Z9;Q9H2J9 SCPEP1 Retinoid-inducible serine carboxypeptidase yes no 0 0 0 6 0 1 43.268 43.362 3 0.044531 10954 20230619_1886_Aki_TMTPro18x_K_F6 62.714 19.688 44080 37174 50638 50701 60882 65448 61280 67591 76939 52718 66959 61011 63881 47320 55323 55920 69955 58139 40818 34138 51053 50285 62427 65094 62253 68472 76998 54356 68980 61138 64857 49747 57211 56184 66709 55241 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35481000 1812 4545 1736 3356 2730 2730 1 9606 Homo sapiens -0.002735509479975917 ALYTLVNK Unmodified 920.53312 0.53311783 623 Q92552-2;D6RH20;A0A024RAJ1;A0A8Q3WKZ8;A0A8Q3SHR4;A0A8Q3WL16;B4DT94;G5EA06;A0A8Q3WKF1;Q92552;A0A8Q3WKI2;A0A8Q3WK88;A0A8Q3WKM3 MRPS27 28S ribosomal protein S27, mitochondrial yes no 0 0 0 3.5 0.5 1 1 55.909 55.934 2 0.0016773 16610 20230619_1883_Aki_TMTPro18x_K_F4 138.83 75.519 77606 64156 72391 78099 82657 107420 82891 84299 98728 79427 80897 78955 89705 68415 85932 92647 90225 84157 71725 58851 74180 78088 85214 105820 84051 87569 98939 80575 84223 79864 91054 72226 87718 92220 86243 80045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187780000 1813 623 1737 3357;3358 2731 2731 1 9606 Homo sapiens 0.06967259419900529 ALYTYESK Unmodified 973.47566 0.47566253 4301 Q92621;B4DE72;Q6P486;U3KPX2 NUP205 Nuclear pore complex protein Nup205 yes no 0 0 0 6.5 0.5 1 1 47.627 47.711 2 0.002378 12537 20230619_1887_Aki_TMTPro18x_K_F7 140.09 90.671 155620 112320 146170 166030 179340 183540 168330 155830 206790 168830 188090 194880 182750 158550 168320 215720 227810 211860 143720 103310 149860 163380 183330 183620 171510 161540 207640 170830 193660 195490 186110 167730 174950 215490 217280 201320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116720000 1814 4301 1738 3359;3360 2732;2733 2733 2 9606 Homo sapiens -0.012136275763282356 ALYYLQIHPQELR Unmodified 1642.8831 0.88312633 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5 DDB1 DNA damage-binding protein 1 yes no 0 0 0 2.5 0.5 1 1 55.972 56.001 3 3.4579E-28 16981 20230619_1881_Aki_TMTPro18x_K_F2 255.23 220.41 356250 308670 344360 351550 314550 396420 352260 358270 442620 277800 241410 177090 240830 188070 297340 262270 252920 199150 329440 282920 350440 352180 330660 396500 355760 366460 437340 282380 256840 185060 248450 197640 298690 258970 242050 190020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 639980000 1815 1710 1739 3361;3362 2734;2735 2734 2 9606 Homo sapiens 0.08740009568646201 AMADALLER Oxidation (M) 1004.4961 0.4960804 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4;H0YIZ0;G3V2Y4 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 1 0 3 0 1 43.765 43.834 2 0.010409 11234 20230619_1882_Aki_TMTPro18x_K_F3 78.516 53.573 144850 105860 122240 147210 176950 161780 167620 158590 192250 165630 181130 194120 205500 166270 183690 215360 212850 201830 133670 97295 127000 145400 179030 162470 170240 162460 194000 167930 187520 194880 207900 175020 188950 214780 203290 191890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85361000 1816 657 1740 3363 2736 2736 403 1 9606 Homo sapiens -0.005987801881587984 AMADPEVQQIMSDPAMR 3 Oxidation (M) 1936.8329 0.83288296 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;H0YGI8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 3 0 2 0 1 42.581 42.66 3 0.019915 11072 20230619_1881_Aki_TMTPro18x_K_F2 46.543 41.488 31250 23315 34330 32561 34896 39453 37763 34577 41185 34991 42049 38560 42402 34694 37459 38697 45078 41232 28903 21427 34618 32209 36276 39249 38017 35681 41771 35467 43092 38873 43025 36136 38603 38965 43030 39150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40137000 1817 2088 1741 3364 2737 2737 1307;1308;1309 1 9606 Homo sapiens -0.09806016996003564 AMADPEVQQIMSDPAMR Oxidation (M) 1904.8431 0.84305371 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;H0YGI8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 1 0 3 0 1 54.34 54.386 3 3.0161E-09 16105 20230619_1882_Aki_TMTPro18x_K_F3 124.96 106.37 37893 34322 40590 39423 32989 48628 35502 42082 46118 43195 43002 40566 42324 34758 43759 45302 41105 47639 35082 31456 40896 39525 35045 48297 36017 43448 46256 43522 44226 41119 43274 36618 44337 45479 39400 45199 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80775000 1818 2088 1741 3365 2738 2738 1307;1308;1309 1 9606 Homo sapiens -0.07317409270763164 AMADPEVQQIMSDPAMR Unmodified 1888.8481 0.84813909 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;H0YGI8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 3.5 0.5 1 1 58.703 58.719 3 2.003E-09 17869 20230619_1882_Aki_TMTPro18x_K_F3 112.12 93.525 25188 21507 25528 25533 21079 23372 27143 21392 33542 29269 27279 29830 30643 29073 28670 30545 30726 32869 23300 19721 25838 25432 22417 23761 27202 22228 33552 29196 28450 30215 31099 30084 29312 30800 29394 31186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90800000 1819 2088 1741 3366;3367 2739 2739 1 9606 Homo sapiens -0.060731054081543334 AMAPLHPHPAGMR Oxidation (M) 1400.6805 0.6805439 4336 Q96DI9;Q9BY77;F6VRR5;B4E0L0;F8WCX5;Q659C6 POLDIP3;DKFZp434G0310 Polymerase delta-interacting protein 3 yes no 0 1 0 2 0 1 30.073 30.142 4 0.0026064 5788 20230619_1881_Aki_TMTPro18x_K_F2 79.82 70.032 8594.8 9329.6 10299 10492 10195 12129 12931 11599 16055 14684 13392 12446 13923 11763 11415 10406 12684 11890 7976.7 8544.1 10323 10525 10677 12129 12969 11969 16072 14613 13880 12703 14074 12091 11715 10568 12118 11280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14246000 1820 4336 1742 3368 2740 2740 2736;2737 1 9606 Homo sapiens -0.00376915309288961 AMAPLHPHPAGMR 2 Oxidation (M) 1416.6755 0.67545852 4336 Q96DI9;Q9BY77;F6VRR5;B4E0L0;F8WCX5;Q659C6 POLDIP3;DKFZp434G0310 Polymerase delta-interacting protein 3 yes no 0 2 0 8 0 1 26.408 26.442 4 0.036282 4455 20230619_1888_Aki_TMTPro18x_K_F8 43.68 31.832 1925.1 1731.4 3105.5 2161.9 2140.8 3498.7 3309.6 3970.6 4096.6 2400.9 3036.7 2953.1 2019.7 2162 3270.8 2576.6 2457.3 1990.7 1790.2 1588.1 3038.5 2168.3 2337.9 3442.8 3295.3 3977.6 4077.4 2528.7 3122.5 2947.9 2155.9 2274.3 3255.3 2552.8 2355.7 1898.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2982000 1821 4336 1742 3369 2741 2741 2736;2737 1 9606 Homo sapiens -0.016212191718750546 AMDDYSVIGR Unmodified 1125.5125 0.51245874 3672 P57772;P57772-2 EEFSEC Selenocysteine-specific elongation factor yes no 0 0 0 4 0 1 48.47 48.507 2 0.0012082 13320 20230619_1883_Aki_TMTPro18x_K_F4 110.76 92.771 113930 96951 116890 90359 94783 113170 120660 98567 141600 119820 126170 135560 136740 117640 114600 125760 147020 153750 105400 88719 118020 92225 100970 112430 120780 102330 142380 120510 130690 136240 138220 122410 118770 127780 140400 145720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56335000 1822 3672 1743 3370 2742 2742 1 9606 Homo sapiens -0.045276990220600055 AMDEIQPDLR Oxidation (M) 1202.5601 0.56013721 2943 E9PQR7;Q548N1;Q9UK41;Q9UK41-2;E9PM90;A0A0S2Z5H5 VPS28 Vacuolar protein sorting-associated protein 28 homolog yes no 0 1 0 1 0 1 42.112 42.112 2 0.0013542 10993 20230619_1880_Aki_TMTPro18x_K_F1 101.97 79.193 25115 20124 22165 25995 28893 29111 26555 24173 34211 26427 29837 27457 29108 25455 32292 30948 29268 34348 23197 18474 22881 25799 29414 29095 27136 25108 34222 26644 30779 27777 29885 26618 32609 31205 28068 32569 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14710000 1823 2943 1744 3371 2743 2743 1749 1 9606 Homo sapiens -0.033040448219026075 AMDPQDLQNTEVPIATTAK Oxidation (M) 2057.9939 0.99393493 1761 A0A8I5KY07;A0A8I5KRP1;A0A8I5KRK1;A0A8I5KYQ0;A0A8I5KZB3;Q9H2M9;A0A8I5KSQ5;A0A8I5KWJ9;B3KNG8 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 1 0 4 0 1 51.926 51.953 3 0.0012768 14904 20230619_1883_Aki_TMTPro18x_K_F4 70.555 61.025 16481 11897 15812 16869 16652 17975 18875 15406 20809 14904 17312 15170 15721 15426 21574 19617 19021 19422 15223 10937 16138 16635 17287 18031 18952 15918 20926 15116 17857 15418 16389 16117 21684 19641 18227 18448 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58068000 1824 1761 1745 3372 2744 2744 1146 1 9606 Homo sapiens 0.007257719132667262 AMDQEITVNPQFVQK Oxidation (M) 1762.856 0.85598488 4692 Q9UNS2;B4DN01;H7C3P9;Q9UNS2-2 COPS3 COP9 signalosome complex subunit 3 yes no 0 1 0 6 0 1 52.816 52.893 3 8.0131E-06 15147 20230619_1886_Aki_TMTPro18x_K_F6 112.96 94.141 70938 53628 61940 71144 57380 65825 74373 69908 77579 81055 77970 79105 90839 74275 80590 95925 82159 90086 65495 49255 63665 70329 60449 67049 74099 71460 78905 81252 80558 80253 91792 77932 82304 95676 78649 85597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97065000 1825 4692 1746 3373 2745 2745 2858 1 9606 Homo sapiens 0.005071131752629299 AMDQEITVNPQFVQK Unmodified 1746.8611 0.86107026 4692 Q9UNS2;B4DN01;H7C3P9;Q9UNS2-2 COPS3 COP9 signalosome complex subunit 3 yes no 0 0 0 6.5 0.5 1 1 56.444 56.511 3 1.5595E-07 16404 20230619_1887_Aki_TMTPro18x_K_F7 121.76 104.48 38659 33958 45443 40500 30425 46363 41066 36469 44469 53916 40759 45548 47170 39626 44101 51894 44774 62197 35815 31137 45357 40450 33159 46187 40911 38418 45032 53295 42315 46380 47791 41754 44986 52496 42953 58902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 468170000 1826 4692 1746 3374;3375 2746 2746 1 9606 Homo sapiens 0.017514170378944982 AMDSDWFAENYMGR Oxidation (M) 1707.6657 0.66574127 3658 P55084-2;P55084;B4DY96;B5MD38;F5GZQ3;B4DDC9 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 1 0 3 0 1 58.438 58.469 2 0.0033098 17811 20230619_1882_Aki_TMTPro18x_K_F3 77.062 74.549 15853 12797 13480 14754 17420 20723 17580 22881 21887 24155 19036 18087 23843 16577 23194 26046 23074 26602 14640 11734 13961 14823 17811 20547 17856 23227 21971 24149 19874 18596 24128 17677 23607 26039 22102 25248 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21343000 1827 3658 1747 3376 2747 2747 2364 1 9606 Homo sapiens -0.15978496758589245 AMDTLGIEYGDK Oxidation (M) 1327.5966 0.5965823 1253 A0A142CHG9;P09471-2;P09471;Q8N6I9;B3KP89;A0A1W2PP87;A0A1W2PRJ7;A0A1W2PS82 GNAO1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 1 0 3 0 1 50.825 50.896 2 0.00051155 14542 20230619_1882_Aki_TMTPro18x_K_F3 99.283 80.503 32662 25833 30194 34155 30563 31250 31199 28721 29165 38121 43786 46798 37332 42198 48482 41880 42141 49867 30177 23721 30901 33762 31710 31771 31377 29793 30436 38272 44002 46941 38892 43622 48721 42564 40435 47251 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37573000 1828 1253 1748 3377 2748 2748 794 1 9606 Homo sapiens -0.05411212715853253 AMDVYQK Oxidation (M) 869.3953 0.39530372 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;H0YGI8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 1 0 4.5 0.5 1 1 39.497 39.563 2 0.016633 9318 20230619_1885_Aki_TMTPro18x_K_F5 102.71 51.748 204770 128760 217970 212030 243450 246920 218240 256020 267280 238800 302480 321550 282420 266460 289740 202480 376910 323250 189170 118660 220610 207680 250040 247160 223220 260360 270780 244770 307960 320580 289470 273310 298780 211590 359410 305940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181360000 1829 2088 1749 3378;3379 2749 2749 1310 1 9606 Homo sapiens -0.04461812171018664 AMDVYQK Unmodified 853.40039 0.4003891 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;H0YGI8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 5.5 0.5 1 1 44.978 45.061 2 0.016136 11677 20230619_1886_Aki_TMTPro18x_K_F6 110.35 70.805 262030 161870 243220 255810 275100 298330 252060 264970 329100 283420 312430 316670 327970 280970 282760 244660 362890 313690 241780 149110 249150 251030 282750 297570 257940 273470 330170 286590 321990 318580 332160 289180 292490 250490 346100 297400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 494660000 1830 2088 1749 3380;3381 2750 2750 1 9606 Homo sapiens -0.03217508308409833 AMEAVAAQGK Oxidation (M) 990.48043 0.48043033 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8;B4DKL5;B4DMJ7;B7Z9E5;B4DJA4;P15259;A4D2J6;B7ZW15 PGAM1;hCG_2015269;PGAM2 Phosphoglycerate mutase;Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 0 1 0 5 0 1 36.963 37.055 3 0.0017274 8288 20230619_1885_Aki_TMTPro18x_K_F5 83.456 61.992 37297 26985 42675 43661 51543 57014 45691 57382 55650 46557 61717 65000 56033 51357 59105 37797 63204 63577 34504 24848 43041 42879 52680 56614 46759 58267 56326 48191 62818 64646 57533 52721 60151 39720 60436 60112 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81505000 1831 3475 1750 3382 2751 2751 2120 1 9606 Homo sapiens -0.015190667052138451 AMEAVAAQGK Unmodified 974.48552 0.48551571 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8;B4DKL5;B4DMJ7;B7Z9E5;B4DJA4;P15259;A4D2J6;B7ZW15 PGAM1;hCG_2015269;PGAM2 Phosphoglycerate mutase;Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 0 0 0 5.8 0.748 2 2 1 43.989 44.073 2;3 0.00076556 11241 20230619_1886_Aki_TMTPro18x_K_F6 95.608 66.911 299070 173780 318310 323440 386950 406210 345220 400340 400260 370360 422360 450060 441850 364530 440250 290560 490770 462750 276190 160500 322770 315210 395220 404110 352430 408380 405540 378290 433420 450010 450180 375230 449610 303330 468880 437800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1189900000 1832 3475 1750 3383;3384;3385;3386;3387 2752;2753;2754 2753 3 9606 Homo sapiens -0.0027476284260501416 AMENIGELKK Unmodified 1131.5958 0.59579444 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6;Q0VGL8 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 1 8 0 1 48.496 48.563 3 0.0027413 12909 20230619_1888_Aki_TMTPro18x_K_F8 82.494 56.873 225210 158840 200000 212540 227350 273180 248600 225290 346390 212890 207590 173360 207500 166880 193420 190460 183140 141010 207880 145940 205800 210950 234970 270440 252240 233160 341400 214990 219260 177670 211080 173600 196330 188310 175030 134610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96879000 1833 1002 1751 3388 2755 2755 1 9606 Homo sapiens 0.03526037425785944 AMESTATAAVAAELVSADK Acetyl (Protein N-term) 1876.9088 0.90880832 3605 P49321;Q53H03;P49321-4;Q6PJY7;P49321-2;Q5T626;Q5T624;E9PPR5;O95138;E9PRH9;E9PI86;E9PNB5;E9PAU3;E9PKR5;E9PJQ2;E9PQG5 NASP Nuclear autoantigenic sperm protein yes no 1 0 0 3 0.816 1 1 1 65.313 65.33 2 1.6179E-19 20679 20230619_1882_Aki_TMTPro18x_K_F3 87.498 78.066 9926.6 9111.4 8878.9 10467 8123 12442 8751 8213.9 17886 14930 12997 16946 18503 20527 11862 27681 23021 34125 9177.8 8350.2 9107.9 10480 8564.4 12329 9063.8 8867.2 17510 14815 13821 17243 18445 21425 12887 28004 21996 32303 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37782000 1834 3605 1752 3389;3390;3391 2756;2757 2756 2 9606 Homo sapiens 0.005430264474398427 AMETEVLETR Unmodified 1177.5649 0.56488824 4494 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant yes yes 0 0 0 2 0 1 46.431 46.51 2 0.070145 12826 20230619_1881_Aki_TMTPro18x_K_F2 72.365 57.105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1835 4494 1753 3392 2758 2758 1 9606 Homo sapiens -0.01679160679123015 AMEVDIEERPK Unmodified 1315.6442 0.6442012 4722 Q9Y3C1;D6RIC3;A0A0C4DGU5;Q9Y3C1-3;Q9Y3C1-2;B4E098;Q9P0T8 NOP16 Nucleolar protein 16 yes no 0 0 1 3.5 0.5 1 1 44.796 44.855 3 2.037E-06 11763 20230619_1882_Aki_TMTPro18x_K_F3 158.02 140.65 170550 149920 167700 165710 162770 210360 198200 198940 208270 212100 220910 225960 240020 184530 206960 258620 238930 226430 157750 137360 170570 166710 170640 209020 198130 204330 212150 214030 226920 227430 242670 195660 213080 256740 228220 215450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177820000 1836 4722 1754 3393;3394 2759 2759 1 9606 Homo sapiens -0.000995137250129119 AMEWITAK Unmodified 948.47389 0.47388839 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;Q8WTZ9;Q49A78;B1APP8;H0Y757 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 1 0 1 57.659 57.659 3 0.0039913 17532 20230619_1880_Aki_TMTPro18x_K_F1 84.568 49.273 69667 65655 69235 71900 67466 96092 88819 87298 96784 80183 66973 63321 78802 61184 83492 83257 83984 86076 64477 60139 70400 72435 70955 95083 88532 89571 96943 80944 70648 65011 80253 64408 84842 83463 80365 81718 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81155000 1837 1831 1755 3395 2760;2761 2760 2 9606 Homo sapiens -0.002409598659369294 AMFEEAYSNYCK Unmodified 1511.6061 0.60610113 4260 Q8NI60;B4DED1;Q5T7A2;B4DVB7;Q8NI60-3;B4DU83;B4DN23;Q8NI60-2;Q8NI60-4 ADCK3 Atypical kinase ADCK3, mitochondrial yes no 0 0 0 6 0 1 56.349 56.424 3 0.0046349 16624 20230619_1886_Aki_TMTPro18x_K_F6 71.085 64.844 72806 59281 61533 64783 64898 77360 68796 68272 69891 88539 85848 85491 96761 88118 79446 101680 90064 100770 67233 54328 63519 65154 67314 77074 69200 70907 71883 88288 87797 87031 97622 91508 81804 101850 86144 95680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54822000 1838 4260 1756 3396 2762 2762 1 9606 Homo sapiens -0.12923767701954603 AMFEQMR Acetyl (Protein N-term) 953.40991 0.40990792 3173 K7ERF1;Q9UBQ5;K7ES31;Q9UBQ5-2;U3LUI4;A0A087WVB9;B4DVD7;K7EQM4 EIF3K Eukaryotic translation initiation factor 3 subunit K yes no 1 0 0 2 0 1 55.76 55.781 2 0.00042913 16910 20230619_1881_Aki_TMTPro18x_K_F2 163.34 93.952 11170 8418.3 7581.1 10411 8839.6 10754 9983.9 10681 11984 9188.8 10982 8949 12686 11048 11072 11341 13512 12283 10296 7726.3 8036.9 10351 9133 10844 10061 10877 12045 9368.1 11376 9181.8 12821 11344 11422 11445 12896 11661 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12286000 1839 3173 1757 3397 2763 2763 1 9606 Homo sapiens -0.06866063294523883 AMFLQPDLDSLVDFSTNNQK Unmodified 2282.0889 0.088897947 4412 Q9BQG0;Q9BQG0-2;I3L1L3;B4DZZ1 MYBBP1A Myb-binding protein 1A yes no 0 0 0 8 0 1 65.123 65.143 3 8.8673E-05 20013 20230619_1888_Aki_TMTPro18x_K_F8 78.021 60.74 14839 12392 14935 14362 12487 19499 16248 18228 17934 20044 17304 17908 21093 15908 16607 21820 21140 23681 13723 11361 15132 14415 13310 19283 16226 18743 18168 20090 17951 18210 21185 16805 17246 21917 20200 22463 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17366000 1840 4412 1758 3398 2764;2765 2765 2 9606 Homo sapiens -0.000862946155393729 AMGAAQVVVTDLSATR Unmodified 1588.8243 0.82429083 3775 V9HW89;Q00796;A0A6I8PIS1;B4DKI2 HEL-S-95n;SORD Sorbitol dehydrogenase yes no 0 0 0 4.5 3.5 1 1 60.66 60.692 3 5.443E-15 18082 20230619_1888_Aki_TMTPro18x_K_F8 188.63 164.34 74814 52527 68312 68038 65674 69015 71080 81504 92414 85230 86062 91958 90717 85110 85518 93742 87842 105270 69067 48246 69884 67474 68594 70003 72053 82466 92682 86143 88843 92803 92247 88457 87233 94687 84145 99797 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 161100000 1841 3775 1759 3399;3400 2766;2767;2768 2768 3 9606 Homo sapiens 0.05343165212025269 AMGAAQVVVTDLSATR Oxidation (M) 1604.8192 0.81920545 3775 V9HW89;Q00796;A0A6I8PIS1;B4DKI2 HEL-S-95n;SORD Sorbitol dehydrogenase yes no 0 1 0 7 0 1 54.1 54.167 3 0.016719 15462 20230619_1887_Aki_TMTPro18x_K_F7 52.323 35.691 60981 55038 63698 67043 69703 78292 76599 73686 77426 86571 78647 68947 72702 52274 94044 62523 55480 55539 56445 50472 64600 66870 72095 78211 76860 75927 78944 86234 80365 70199 75282 55066 92953 62388 53456 52825 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70978000 1842 3775 1759 3401 2769 2769 2457 1 9606 Homo sapiens 0.04098861349393701 AMGIMNSFVNDIFER 2 Oxidation (M) 1774.8018 0.80184082 73;721;4226 U3KQK0;A0A024QZZ7;A0A024RCJ9;A0A024RCL8;B2R4S9;B4DR52;I6L9F7;Q5QNW6-2;Q99879;Q99877;Q5QNW6;P62807;P58876;O60814;Q93079;Q99880;P57053;A8K9J7;Q0D2M2;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 HIST1H2BN;HIST1H2BD;HIST1H2BK;HIST1H2BI;HIST1H2BM;HIST2H2BF;HIST1H2BC;HIST1H2BH;HIST1H2BL;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 2-F;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-H;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B no no 0 2 0 6.44 2.06 1 2 3 3 60.656 60.695 2;3 8.988E-11 18970 20230619_1886_Aki_TMTPro18x_K_F6 154.72 130.89 1034800 912790 909350 1139600 1246100 996290 1066700 1066400 995770 888220 1183200 992240 948740 843740 1128500 1101800 909150 1067600 956380 837330 940070 1130200 1259800 1021000 1084100 1080400 1025400 910230 1194100 999010 984100 888580 1132300 1101300 873090 1013800 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 11998000000 1843 73;721;4226 1760 3402;3403;3404;3405;3406;3407;3408;3409;3410 2770;2771;2772;2773;2774;2775 2771 34;35 6 9606 Homo sapiens -0.05456802247908854 AMGIMNSFVNDIFER Oxidation (M) 1758.8069 0.8069262 73;721;4226 U3KQK0;A0A024QZZ7;A0A024RCJ9;A0A024RCL8;B2R4S9;B4DR52;I6L9F7;Q5QNW6-2;Q99879;Q99877;Q5QNW6;P62807;P58876;O60814;Q93079;Q99880;P57053;A8K9J7;Q0D2M2;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 HIST1H2BN;HIST1H2BD;HIST1H2BK;HIST1H2BI;HIST1H2BM;HIST2H2BF;HIST1H2BC;HIST1H2BH;HIST1H2BL;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 2-F;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-H;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B no no 0 1 0 6.18 2.62 1 1 1 2 6 63.018 63.044 3 9.1328E-20 20293 20230619_1880_Aki_TMTPro18x_K_F1 216.27 194.81 1267000 1201100 1242300 1246600 1109700 1272300 1208600 1326000 1226000 1159000 1381100 1158000 1290500 1140100 1330800 1331300 1151000 1241000 1172600 1099700 1262000 1256500 1166100 1286300 1214500 1346300 1253700 1180200 1404600 1176500 1321800 1186500 1342700 1329800 1103600 1179300 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 12648000000 1844 73;721;4226 1760 3411;3412;3413;3414;3415;3416;3417;3418;3419;3420;3421 2776;2777;2778;2779;2780;2781;2782;2783;2784;2785;2786 2776 34;35 11 9606 Homo sapiens -0.04212498385300023 AMGIMNSFVNDIFER Unmodified 1742.812 0.81201158 73;721;4226 U3KQK0;A0A024QZZ7;A0A024RCJ9;A0A024RCL8;B2R4S9;B4DR52;I6L9F7;Q5QNW6-2;Q99879;Q99877;Q5QNW6;P62807;P58876;O60814;Q93079;Q99880;P57053;A8K9J7;Q0D2M2;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 HIST1H2BN;HIST1H2BD;HIST1H2BK;HIST1H2BI;HIST1H2BM;HIST2H2BF;HIST1H2BC;HIST1H2BH;HIST1H2BL;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 2-F;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-H;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B no no 0 0 0 3.5 2.69 1 1 1 1 65.901 65.917 3 1.1010999999999998E-52 21158 20230619_1881_Aki_TMTPro18x_K_F2 241.07 192.05 107590 79024 98644 95050 60236 84095 93249 80859 93465 85343 91935 90112 97174 96999 97788 111830 87378 95482 99350 72515 100370 94565 66636 85768 92146 83033 95092 86198 94646 91564 99123 100520 98937 111200 83760 90833 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 878270000 1845 73;721;4226 1760 3422;3423;3424;3425 2787;2788;2789;2790 2788 4 9606 Homo sapiens -0.02968194522691192 AMGPLVLTEVLFNEK Unmodified 1659.8906 0.89057948 406 A0A024R6Q1;P55010;Q6IBU0;B4DEN3 EIF5 Eukaryotic translation initiation factor 5 yes no 0 0 0 1.5 0.5 1 1 66.347 66.35 3 1.2101E-18 21290 20230619_1881_Aki_TMTPro18x_K_F2 194.7 176.89 14587 11634 12272 12451 12317 12769 14867 14413 16255 12932 15045 15274 15628 13929 15822 17818 15127 20153 13469 10661 12661 12521 12857 12932 14884 14573 16419 13224 15524 15366 15945 14618 16060 17965 14515 19098 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49056000 1846 406 1761 3426;3427 2791;2792 2792 2 9606 Homo sapiens 0.0870298105405709 AMGPLVLTEVLFNEK Oxidation (M) 1675.8855 0.8854941 406 A0A024R6Q1;P55010;Q6IBU0;B4DEN3 EIF5 Eukaryotic translation initiation factor 5 yes no 0 1 0 4.5 3.5 1 1 64.892 64.912 3 8.0917E-08 19911 20230619_1888_Aki_TMTPro18x_K_F8 129.54 111.17 58195 43609 56662 66593 59681 59496 64011 59286 70133 62602 73492 68335 69990 66132 72042 82065 74565 100120 53772 40120 57784 65233 61820 60692 64481 60714 71199 63287 75071 69103 71687 69136 73428 83178 71496 94809 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79150000 1847 406 1761 3428;3429 2793;2794;2795 2795 257 3 9606 Homo sapiens 0.0745867719144826 AMGYQPLVTMDDAMER Unmodified 1826.8001 0.80012626 1481 A0A7D5Q2L7;A0A384NPZ7;Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes no 0 0 0 4 0 1 60.592 60.594 3 0.058039 18552 20230619_1883_Aki_TMTPro18x_K_F4 41.871 34.669 19677 17193 23516 20801 21250 22158 22507 24133 24203 23030 25150 27996 26243 21788 30421 29032 27910 29399 18232 15767 23516 20742 22263 22353 22691 24485 24598 23478 25841 27988 26941 23061 30715 29083 26739 27914 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6186400 1848 1481 1762 3430 2796 2796 1 9606 Homo sapiens -0.08020179328218546 AMHGELQK Oxidation (M) 928.44365 0.44365089 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 5 0.816 1 1 1 31.625 31.695 3 0.0011668 6161 20230619_1883_Aki_TMTPro18x_K_F4 113.7 73.631 106550 37578 111780 130810 175370 145810 144240 160780 159950 112970 178240 187300 134200 126690 149450 83473 184510 157580 98214 35278 114130 124440 175900 146560 147760 161930 162540 118990 180170 184600 139190 130390 153250 88964 176010 148980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113060000 1849 3758 1763 3431;3432;3433 2797;2798;2799 2797 2430 3 9606 Homo sapiens -0.023433185311205307 AMHQAQTMEGCSSPMVVK Oxidation (M) 2006.8682 0.8682226 3017 Q92879-3;Q92879-2;Q92879-5;G5EA30;Q92879;Q92879-4;Q92879-6 CELF1 CUGBP Elav-like family member 1 yes no 0 1 0 7 0 1 41.3 41.371 3 0.0092952 9795 20230619_1887_Aki_TMTPro18x_K_F7 58.159 47.962 10648 5884.1 12962 12008 9042.6 12400 12294 12571 12478 13996 13067 13056 14130 11509 12068 17439 15090 14903 9843.8 5443.7 12913 11622 9800.2 12496 12222 12868 12733 14035 13425 13252 14289 12236 12505 17270 14408 14182 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12010000 1850 3017 1764 3434 2800 2800 1778 1 9606 Homo sapiens -0.09493677739874329 AMHQAQTMEGCSSPMVVK Unmodified 1990.8733 0.87330798 3017 Q92879-3;Q92879-2;Q92879-5;G5EA30;Q92879;Q92879-4;Q92879-6 CELF1 CUGBP Elav-like family member 1 yes no 0 0 0 7 0 1 44.44 44.523 3 7.2167E-05 11130 20230619_1887_Aki_TMTPro18x_K_F7 84.842 80.225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1851 3017 1764 3435 2801 2801 1 9606 Homo sapiens -0.0824937387724276 AMHTPKPSVGEEK Oxidation (M) 1425.6922 0.69221402 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 1 1 6 0 1 34.617 34.663 4 0.020653 7476 20230619_1886_Aki_TMTPro18x_K_F6 70.889 61.064 28626 10342 21794 19406 18981 18987 21947 22900 21048 21997 28721 16202 21673 15351 22018 14986 16177 13228 26325 9583.1 22645 18848 20014 19311 21949 23093 21784 22093 28713 16718 22321 15862 22021 14995 15514 12594 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27637000 1852 3588 1765 3436 2802 2802 2257 1 9606 Homo sapiens -0.003604398049219526 AMIEVINHK Unmodified 1053.5641 0.56410038 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1;A0A494C0X4 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 8 0 1 47.449 47.508 3 1.3329E-08 12465 20230619_1888_Aki_TMTPro18x_K_F8 200.05 123.99 124940 93470 119070 118350 115000 133510 127700 117920 148720 145980 145830 133300 162030 126180 132810 170070 152810 149040 115420 85809 121380 117680 120200 133490 128680 122320 150240 145680 150350 135750 163400 132750 136880 168910 145990 141790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157890000 1853 1552 1766 3437 2803 2803 1 9606 Homo sapiens 0.03946089462488089 AMIGHTDSAEAAPGTIR Oxidation (M) 1712.8152 0.8151827 2955 H0Y6J0;Q4TT34;F2Z2X0;O00746;A0A087WVT9;O00746-2 NME4 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase, mitochondrial yes no 0 1 0 3 0 1 36.076 36.13 3 2.8556E-09 8030 20230619_1882_Aki_TMTPro18x_K_F3 126.07 102.23 12785 9806.5 14184 14495 17276 17272 15615 16766 16420 14635 19669 19996 14868 14905 15485 19490 17780 18387 11828 9017.4 14338 14286 17636 17241 15874 17104 16798 15065 19820 19894 15373 15766 15886 19439 16994 17473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24163000 1854 2955 1767 3438 2804 2804 1752 1 9606 Homo sapiens -0.01271228144332781 AMKPPGGESSNLFGSPEEATPSSRPNR Oxidation (M) 2815.3195 0.3195196 1969 A6NGP5;Q9H910;Q9H910-3;H3BMV3;B4DL85;H3BMM8;B4E1P3 HN1L Hematological and neurological expressed 1-like protein yes no 0 1 2 7.5 0.5 1 1 42.117 42.156 4 3.3095E-06 10386 20230619_1888_Aki_TMTPro18x_K_F8 94.542 88.037 33866 30420 34135 35506 34440 35108 30002 31711 35060 43787 49400 51808 45737 38369 39672 49950 50222 50264 31336 27885 34654 35440 35614 35474 30700 32962 36037 43826 49855 51765 46506 40629 41088 49996 47950 47737 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117190000 1855 1969 1768 3439;3440 2805;2806 2806 1248 2 9606 Homo sapiens -0.015527380914591049 AMKPPGGESSNLFGSPEEATPSSRPNR Unmodified 2799.3246 0.32460498 1969 A6NGP5;Q9H910;Q9H910-3;H3BMV3;B4DL85;H3BMM8;B4E1P3 HN1L Hematological and neurological expressed 1-like protein yes no 0 0 2 8 0 1 45.257 45.286 4 8.6114E-61 11584 20230619_1888_Aki_TMTPro18x_K_F8 248.76 235.97 99358 79066 87915 92619 63969 88081 84084 93905 92693 116010 104870 106340 122770 97988 100410 131500 115220 118650 91770 72512 89939 92395 69053 89521 83963 96097 94559 115700 107810 108130 123630 103150 103490 130790 110120 112820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212290000 1856 1969 1768 3441 2807 2807 1 9606 Homo sapiens -0.0030843422882753657 AMLDQLMGTSR Unmodified 1221.5846 0.58457783 4715 Q9Y383;B3KSL5;Q75M91;V9GZ75;F8WEU3 LUC7L2;CGI-59;C7orf55-LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 0 0 0 2 0 1 58.945 58.959 2 7.1848E-17 18174 20230619_1881_Aki_TMTPro18x_K_F2 233.14 213.77 305630 259520 270550 286380 208070 325950 296580 286620 339370 292440 238270 220840 284400 237240 286270 303460 286200 269190 282410 237820 277040 287590 224330 325510 295200 295690 339250 293240 251220 228120 288910 247740 291140 301930 273720 256100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 80052000 1857 4715 1769 3442 2808;2809 2808 2 9606 Homo sapiens -0.017351079400214076 AMLDQLMGTSR Oxidation (M) 1237.5795 0.57949245 4715 Q9Y383;B3KSL5;Q75M91;V9GZ75;F8WEU3 LUC7L2;CGI-59;C7orf55-LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 0 1 0 8 0 1 50.829 50.906 2 0.00022034 13922 20230619_1888_Aki_TMTPro18x_K_F8 121.5 101.34 74633 53400 67011 67954 72365 77053 73745 73005 84835 63443 68372 56685 67893 55407 72080 70860 68505 65994 68898 49036 68785 67554 74788 77134 74619 74606 85079 64472 70845 57887 69493 58027 73018 70694 65562 62742 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150760000 1858 4715 1769 3443 2810 2810 2876 1 9606 Homo sapiens -0.029794118026302385 AMLESIGVPLEK Oxidation (M) 1301.6901 0.69008876 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2;A0A0C4DGZ5;A0A6Q8PFX4;A0A6Q8PFC1;A0A6Q8PF15 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 1 0 5.5 0.5 1 1 57.509 57.573 3 0.00077314 17078 20230619_1886_Aki_TMTPro18x_K_F6 88.338 65.459 53383 46026 50485 60958 54908 55190 56558 56283 68359 55453 58314 63472 64546 60131 70959 69381 66029 70147 49357 42251 51646 60241 56707 56282 57294 57429 68546 56361 60638 63968 66020 62597 71764 69627 63252 66603 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120630000 1859 1102 1770 3444;3445 2811 2811 676 1 9606 Homo sapiens 0.051311314572785705 AMLPPNSFQGK Unmodified 1188.5961 0.59612879 569 A0A024R9D7;Q16698-2;Q16698;E5RJG7;Q7LDK6;E5RFV2;E5RID6 DECR1;DECR 2,4-dienoyl-CoA reductase, mitochondrial yes no 0 0 0 3 0 1 51.897 51.962 2 0.001265 15033 20230619_1882_Aki_TMTPro18x_K_F3 115.71 95.194 25366 20708 22828 27982 27134 35237 33727 29157 35989 28365 27607 32895 33058 27764 27245 31441 34831 42038 23436 19018 23511 27738 28064 34920 33666 30201 36186 28867 28995 32998 33300 29022 28250 32112 33303 39789 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14816000 1860 569 1771 3446 2812 2812 1 9606 Homo sapiens 0.00937457145641929 AMLQLHER Oxidation (M) 1012.5124 0.51239916 1747 Q96HW7;A0A8Q3SHR8;A8K4A1;A0A8V8TLR7;A0A8Q3WKC9;A0A8Q3WKC3;A0A8Q3WKB9;A0A8Q3WKC7;A0A8Q3SHL8;A0A8Q3SHK8;A0A8Q3SHM4;A0A8Q3SHT4;A0A8C8UVZ7;A0A8Q3WKW5;A0A8Q3WKB5;A0A8Q3WKC2;A0A8Q3SII1;Q96HW7-2;A0A8Q3SHU3;Q96HW7-3 INTS4 Integrator complex subunit 4 yes no 0 1 0 6.5 0.5 1 1 33.161 33.225 3 0.04351 6977 20230619_1886_Aki_TMTPro18x_K_F6 49.715 29.148 15748 13597 20400 18672 25530 27581 23956 22946 53189 20572 20033 19436 19067 21423 20323 14489 23634 21152 14602 12487 20404 18553 26114 27102 25108 23692 51100 20973 22059 19837 19607 21657 20792 15069 22563 20029 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3546500 1861 1747 1772 3447;3448 2813 2813 1142 1 9606 Homo sapiens 0.00664345768586827 AMLSANIR Oxidation (M) 890.46439 0.46438634 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 8 0 1 38.533 38.519 2 0.039958 8890 20230619_1888_Aki_TMTPro18x_K_F8 70.69 29.115 101610 68356 90422 100110 122090 117540 119920 114350 140440 86187 110870 103060 92761 86960 102560 95785 112960 105230 93769 62884 93308 98679 124160 117460 121610 116310 140520 89225 114320 103380 95794 90664 104650 96673 107930 99872 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56060000 1862 826 1773 3449 2814 2814 486 1 9606 Homo sapiens 0.014772718485460246 AMLSGPGQFAENETNEVNFR Unmodified 2210.0062 0.00623095 479 E5RHG8;A0A024R7Y5;Q15369;Q15369-2 TCEB1 Transcription elongation factor B polypeptide 1 yes no 0 0 0 4 0.816 1 1 1 58.144 58.174 3 1.5342E-66 17587 20230619_1883_Aki_TMTPro18x_K_F4 300.37 292.84 67783 54564 73245 68326 57573 64417 62732 66152 75794 66022 67384 63422 76626 66550 72222 73680 73159 78798 62712 50071 73673 67846 61191 65478 63409 67465 76128 66680 69917 64643 77713 68933 73577 74214 70028 74768 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 294370000 1863 479 1774 3450;3451;3452 2815;2816 2815 2 9606 Homo sapiens -0.050371916236599645 AMLSTGFK Oxidation (M) 869.43169 0.43168922 2980 F8VPD4;P27708;Q53SY7;Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327-2;P31327;P31327-3 CAD;CPS1 CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase;Carbamoyl-phosphate synthase [ammonia], mitochondrial yes no 0 1 0 1.5 0.5 1 1 46.403 46.443 2 0.081909 12876 20230619_1881_Aki_TMTPro18x_K_F2 62.88 24.558 122800 104010 118140 105320 123290 138820 133730 122360 162980 122030 151290 130480 135030 107820 140440 160890 170700 134420 113540 95241 120400 106780 128010 137500 135110 126140 163710 123700 154930 131490 138590 114750 144490 159280 162780 128090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54928000 1864 2980 1775 3453;3454 2817 2817 1764 1 9606 Homo sapiens -0.00824935274283689 AMLSTGFK Unmodified 853.43677 0.4367746 2980 F8VPD4;P27708;Q53SY7;Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327-2;P31327;P31327-3 CAD;CPS1 CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase;Carbamoyl-phosphate synthase [ammonia], mitochondrial yes no 0 0 0 3 0 1 51.633 51.699 3 0.037621 14935 20230619_1882_Aki_TMTPro18x_K_F3 59.245 29.436 68400 75958 66955 60856 66146 69488 64568 70665 91652 64406 63459 52411 57831 57761 69584 65330 68440 56910 63378 69375 68072 62921 68755 69726 66047 71910 90636 65129 66135 53989 59835 59768 70460 65083 65414 54185 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43494000 1865 2980 1775 3455 2818 2818 1 9606 Homo sapiens 0.004193685883251419 AMLVFAEHR Oxidation (M) 1088.5437 0.54369929 347;1713 B7Z7Q6;E9PNF7;A0A024R5L0;P42785;P42785-2;E9PQB5;E9PL85;E9PKN6;E9PL49;E9PNJ1;A0A7P0TB23 PRCP Lysosomal Pro-X carboxypeptidase no no 0 1 0 7 0 1 41.189 41.261 3 0.04053 9801 20230619_1887_Aki_TMTPro18x_K_F7 46.819 37.386 43958 35438 40963 40229 42831 47163 52067 42566 67053 39377 46059 35551 40817 33179 43479 45189 44435 33582 40620 32489 41892 40338 44615 47069 52378 43744 66509 39921 47949 36247 41952 34930 44225 44569 42430 32059 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22355000 1866 347;1713 1776 3456 2819 2819 203 1 9606 Homo sapiens 0.0029691880267819215 AMNGESLDGR Oxidation (M) 1064.4557 0.45567214 15 A0A024QYX3;P98179 RBM3 RNA-binding protein 3 yes no 0 1 0 1.5 0.5 1 1 28.076 28.113 3 0.040052 5301 20230619_1880_Aki_TMTPro18x_K_F1 45.908 33.411 14379 8553.9 11758 14279 17933 18627 18947 15999 23006 14272 11826 14294 17292 14203 11965 14221 20865 16452 13253 7886.9 12273 13992 18168 18439 19144 16487 22747 14541 12912 14497 17235 14662 12760 14410 19847 15619 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31035000 1867 15 1777 3457;3458 2820 2820 7 1 9606 Homo sapiens -0.07397746578590159 AMNGESLDGR Unmodified 1048.4608 0.46075752 15 A0A024QYX3;P98179 RBM3 RNA-binding protein 3 yes no 0 0 0 2 0 1 37.451 37.512 2 9.2704E-05 8698 20230619_1881_Aki_TMTPro18x_K_F2 143.39 109.14 49396 32874 45158 45384 62066 76427 61558 69568 94834 58313 61415 61264 72473 58411 48091 58370 254140 74438 45589 30223 46499 45200 63254 74720 63091 71177 93291 59713 65024 61969 72745 60391 60654 59526 239920 71190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44761000 1868 15 1777 3459 2821 2821 1 9606 Homo sapiens -0.0615344271595859 AMNVLTEAEER Unmodified 1261.5973 0.597251 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;B3KM27;A0A0C4DGE5 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 2 0 1 50.42 50.472 2 0.00063783 14675 20230619_1881_Aki_TMTPro18x_K_F2 112.94 102.23 200860 151550 186780 171190 150460 206410 180800 197110 220060 222010 206050 209630 226540 176170 187660 257250 228020 222500 185540 138970 190300 171840 160390 205770 181870 202580 221490 222640 212950 212300 228650 187150 194120 255050 217740 211720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165270000 1869 128 1778 3460 2822 2822 1 9606 Homo sapiens -0.023083732761506326 AMPEEEPVR Unmodified 1056.491 0.49099502 2338 B7Z6D5;B3GQE6;Q96GQ7;Q53G15 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 0 0 1 0 1 38.477 38.477 2 0.054202 9404 20230619_1880_Aki_TMTPro18x_K_F1 60.436 55.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1870 2338 1779 3461 2823 2823 1 9606 Homo sapiens -0.034990840507816756 AMPEEEPVRGPAK Unmodified 1409.6973 0.6972994 2338 B7Z6D5;B3GQE6;Q96GQ7;Q53G15 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 0 1 3.5 0.5 1 1 40.232 40.282 3 9.0832E-05 9660 20230619_1883_Aki_TMTPro18x_K_F4 101.32 89.175 65174 54337 64151 59541 73390 81315 77928 71426 86961 82919 83122 90075 95238 78232 83514 101630 102390 92451 60264 49794 65370 60017 75627 80363 78571 73957 87950 83422 86043 90720 96264 82318 86266 101190 97715 87944 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78336000 1871 2338 1780 3462;3463 2824 2824 1 9606 Homo sapiens 0.00883864057664141 AMQADISQAAQILSSDPSR Unmodified 1987.9633 0.9633035 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 7 0.816 1 1 1 62.106 62.144 3 3.1632E-39 18767 20230619_1887_Aki_TMTPro18x_K_F7 243.26 228.1 144860 117360 129310 148060 109520 135850 127060 120260 145330 206420 189690 178770 214150 176210 175750 242340 196010 235400 133820 107700 132470 146810 115980 137940 127740 126290 149100 203100 193500 182720 215910 185400 180900 241850 187610 223510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 695460000 1872 3578 1781 3464;3465;3466 2825 2825 1 9606 Homo sapiens 0.008840383188726264 AMQDAEVSK Oxidation (M) 993.44371 0.44371047 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 1 0 2 0 1 36.017 36.074 2 0.010769 8072 20230619_1881_Aki_TMTPro18x_K_F2 77.662 54.106 11560 5711.4 16266 15560 23200 22460 19092 24428 18687 11151 30354 28653 20803 20042 24014 12218 27275 25915 10698 5316.5 16229 14981 23396 22214 19500 24450 19460 12509 30168 28014 21697 20539 24475 13211 26055 24474 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12041000 1873 1488 1782 3467 2826 2826 992 1 9606 Homo sapiens -0.05327363321782741 AMQDAEVSK Unmodified 977.4488 0.44879585 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 3 0 1 41.236 41.295 3 0.028344 10174 20230619_1882_Aki_TMTPro18x_K_F3 58.955 40.643 54664 36412 51576 73501 88748 99684 67628 64299 87009 56863 57853 59759 50745 53669 62730 35311 55713 63656 50464 33650 53341 71378 88732 97927 69962 67957 86321 58057 60456 60262 52660 54593 63037 37463 53428 60132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62352000 1874 1488 1782 3468 2827 2827 1 9606 Homo sapiens -0.04083059459162541 AMQETVDALR Oxidation (M) 1148.5496 0.54957253 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9;H0YIM7 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 1 0 2.5 0.5 1 1 39.418 39.478 2 0.0012828 9411 20230619_1882_Aki_TMTPro18x_K_F3 103.42 71.467 46396 38573 40818 52879 59827 58944 49285 50454 63132 47335 59900 62946 64378 53408 50833 64453 70485 73575 42862 35427 42274 52269 60338 58958 50728 52064 63358 48519 61808 62896 64931 56000 53089 65058 67271 69773 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69933000 1875 4170 1783 3469;3470 2828 2828 2685 1 9606 Homo sapiens -0.018760274763280904 AMQETVDALR Unmodified 1132.5547 0.55465791 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9;H0YIM7 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 0 0 4 0 1 47.939 47.979 2 1.2243E-10 13046 20230619_1883_Aki_TMTPro18x_K_F4 159.34 96.79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1876 4170 1783 3471 2829 2829 1 9606 Homo sapiens -0.0063172361371925945 AMQGAGTQER Unmodified 1047.4767 0.47674194 2493 B4DT77;B4DWU2;B4DHY4;Q53HM8;P20073-2;P20073;B2R7L2;B2R657 ANXA7 Annexin;Annexin A7 yes no 0 0 0 3 0 1 28.998 29.1 2 0.025778 5286 20230619_1882_Aki_TMTPro18x_K_F3 72.643 51.136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1877 2493 1784 3472 2830 2830 1 9606 Homo sapiens -0.045097364790763095 AMQHAEVYYK Oxidation (M) 1254.5703 0.57030797 1963 Q9P0N4;A6NDF3;Q9BVG4 PBDC1 Protein PBDC1 yes no 0 1 0 6.5 0.5 1 1 37.025 37.092 3 0.00034633 8362 20230619_1886_Aki_TMTPro18x_K_F6 104.79 80.413 39222 24383 39712 37246 52172 46314 52520 48247 60059 45699 57096 54895 52704 43845 53629 54146 63544 57212 36217 22451 40466 36675 53126 46199 53146 49091 60578 46621 58520 54964 53980 46139 55064 54418 60658 54331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41574000 1878 1963 1785 3473;3474 2831 2831 1244 1 9606 Homo sapiens -0.04679437096660877 AMQHAEVYYK Unmodified 1238.5754 0.57539335 1963 Q9P0N4;A6NDF3;Q9BVG4 PBDC1 Protein PBDC1 yes no 0 0 0 7 0 1 41.218 41.289 3 0.00015951 9781 20230619_1887_Aki_TMTPro18x_K_F7 109.6 87.125 62724 49094 67486 68119 79821 91205 93591 86310 108470 88220 91916 94884 92116 87016 90271 96791 113230 96390 58020 45107 68374 67520 82319 90329 93973 88558 108930 89311 95127 95756 94017 90491 93120 97080 108000 91617 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55665000 1879 1963 1785 3475 2832 2832 1 9606 Homo sapiens -0.03435133234052046 AMSIGAR Unmodified 704.36394 0.36394401 2961 F5GX11;V9HW55;P25786;P25786-2 PSMA1;HEL-S-275 Proteasome subunit alpha type-1 yes no 0 0 0 1 0 1 36.706 36.706 2 0.010724 8660 20230619_1880_Aki_TMTPro18x_K_F1 117.6 74.137 63079 38246 56364 67015 71316 83945 72513 70137 200460 65633 68872 87729 80920 69986 63860 57151 93400 80563 58181 35284 58116 65463 73262 83219 76817 72505 191260 67584 77431 87343 81502 72113 66816 58985 88990 76318 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37799000 1880 2961 1786 3476 2833 2833 1 9606 Homo sapiens -6.340414461192267E-05 AMSTTSISSPQPGK Unmodified 1390.6762 0.67622961 2457;2620 Q59FH4;H0Y5J4;B4DDU5;Q9UJU6-5;Q9UJU6;B4DKZ4;B4DXL9;Q9UJU6-2;Q9UJU6-3;B4DDD6;Q9UJU6-4;B4DUF9;Q9UJU6-6 DBNL Drebrin-like protein no no 0 0 0 1 0 1 44.027 44.027 3 4.302E-05 11917 20230619_1880_Aki_TMTPro18x_K_F1 102.87 85.93 41783 25711 32410 37905 49301 40571 37279 38182 49804 45293 46655 36325 47959 38035 46563 43294 67235 45100 38504 23665 33966 37293 49490 40796 38670 39356 49917 45143 48003 37375 48849 39485 48482 43536 63977 42898 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67922000 1881 2457;2620 1787 3477 2834 2834 1 9606 Homo sapiens -0.0034814604184703057 AMSTTSISSPQPGK Oxidation (M) 1406.6711 0.67114423 2457;2620 Q59FH4;H0Y5J4;B4DDU5;Q9UJU6-5;Q9UJU6;B4DKZ4;B4DXL9;Q9UJU6-2;Q9UJU6-3;B4DDD6;Q9UJU6-4;B4DUF9;Q9UJU6-6 DBNL Drebrin-like protein no no 0 1 0 7.5 0.5 1 1 39.427 39.453 3 2.7318E-05 9237 20230619_1888_Aki_TMTPro18x_K_F8 106.17 90.418 55878 46037 59133 57889 65914 63511 62309 68357 76469 64424 85679 77940 72887 65056 70929 74415 78453 71216 51696 42245 59878 57580 67769 63928 63508 69377 77394 65738 86854 78126 74720 67993 72594 74453 74941 67702 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56439000 1882 2457;2620 1787 3478;3479 2835;2836 2836 1515 2 9606 Homo sapiens -0.015924499044558615 AMTEDGFLAVCSEAK Oxidation (M) 1643.7171 0.71710814 3409 P08243-2;P08243;P08243-3;B4DY32;F8WEJ5;C9J057;C9JT45 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 1 0 3.5 0.5 1 1 53.8 53.835 3 9.8869E-05 15879 20230619_1882_Aki_TMTPro18x_K_F3 94.673 83.233 84159 63666 75532 87451 75066 89089 78032 81184 93935 81915 90270 98428 91238 67205 100310 98094 82542 120030 77717 58496 77509 86347 78184 89750 79027 83529 94616 83250 92917 98115 93425 72062 100870 99293 79407 113630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88795000 1883 3409 1788 3480;3481 2837 2837 2024 1 9606 Homo sapiens -0.07900172784525239 AMTEDGFLAVCSEAK Unmodified 1627.7222 0.72219352 3409 P08243-2;P08243;P08243-3;B4DY32;F8WEJ5;C9J057;C9JT45 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 4 0 1 58.029 58.033 3 0.0046255 17500 20230619_1883_Aki_TMTPro18x_K_F4 67.136 54.156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1884 3409 1788 3482 2838 2838 1 9606 Homo sapiens -0.0665586892189367 AMTEPSALIEK Unmodified 1188.606 0.60602477 275;1599 A0A024R3Z1;Q6NYC5;A0A669KB77;P11137-3;P11137 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 0 5.5 0.5 1 1 53.12 53.195 3 0.0026539 15149 20230619_1885_Aki_TMTPro18x_K_F5 74.751 57.725 35009 27100 29827 38665 30243 31312 34313 33771 41061 39515 47094 44438 42052 36454 43080 50270 40898 46608 32322 24908 30786 37982 31495 32277 34576 34506 41669 39775 47798 44650 43124 38583 43713 50068 39192 44287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54808000 1885 275;1599 1789 3483;3484 2839 2839 1 9606 Homo sapiens 0.019266003603434 AMTGVEQWPYR Oxidation (M) 1352.6183 0.6183208 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 1 0 7 0.816 1 1 1 47.037 47.109 2 0.00046995 12614 20230619_1886_Aki_TMTPro18x_K_F6 113.44 97.221 127090 115250 121960 138280 145190 129650 144860 135740 138460 150300 160800 125770 154040 118650 155650 146090 134710 133540 117560 105670 124730 137660 148680 132010 145900 138680 142380 150330 163430 128680 157370 124150 157040 145710 129080 126980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 405750000 1886 2435 1790 3485;3486;3487 2840;2841 2840 1496 2 9606 Homo sapiens -0.04388363176622079 AMTGVEQWPYR Unmodified 1336.6234 0.62340617 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 8 0 1 52.512 52.589 3 2.7373E-12 14665 20230619_1888_Aki_TMTPro18x_K_F8 161.67 151.36 79911 59444 62046 66865 52381 81585 64199 74487 95902 88690 73506 79442 88771 77837 77780 93015 79041 85074 73713 54510 64421 67123 55791 81170 65045 76916 95041 88627 77170 80987 89619 81136 79442 92746 75655 80866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178750000 1887 2435 1790 3488 2842 2842 1 9606 Homo sapiens -0.031440593139905104 AMTILLEEAK Unmodified 1117.6053 0.60529649 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;A0A3B3ISX1;A0A3B3ITG9;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 6 0 1 62.195 62.246 3 0.027843 19128 20230619_1886_Aki_TMTPro18x_K_F6 57.149 36.279 235400 189380 212910 217650 166950 210210 213130 208410 220880 238700 263960 275960 255050 233950 256100 254880 279290 287000 217480 173640 217510 217460 178530 213080 212590 213930 226310 240690 268530 276960 260740 243770 261670 257620 267050 272220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135430000 1888 1718;4020 1791 3489 2843 2843 1 9606 Homo sapiens 0.051198057112969764 AMVASGSELGK Unmodified 1048.5223 0.52229515 1240 F8W1A4;A0A140VK93;P54819-5;P54819-2;P54819;P54819-3;B4DLK2;G3V213;F8VZG5;A0A5F9ZHP2;P54819-6;P54819-4 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes no 0 0 0 7 0 2 46.204 46.291 2;3 9.9158E-06 11861 20230619_1887_Aki_TMTPro18x_K_F7 176.33 137.3 144360 114150 133320 142750 143440 160450 147260 141320 178420 169760 170210 180960 199100 161030 161050 205950 209850 205640 133370 104760 136560 142030 148390 160470 149230 146480 179730 170430 176330 182540 200480 169170 167370 206080 200280 195340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 111130000 1889 1240 1792 3490;3491 2844;2845 2844 2 9606 Homo sapiens -2.5110166916419985E-05 AMVDPAQTVEQR Oxidation (M) 1359.6453 0.64526383 337 A0A024R5F4;P50416;B2RAQ8;P50416-2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 1 0 3 0 1 39.288 39.342 2 6.0521E-05 9309 20230619_1882_Aki_TMTPro18x_K_F3 121.5 109.28 21204 16071 16728 20621 34462 36839 36516 38261 41080 18981 24114 24728 29250 20843 23377 24226 26619 33903 19563 14755 17668 20659 34448 36040 36799 38446 40841 20423 25767 24736 29393 21839 24060 24825 25488 32072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20658000 1890 337 1793 3492 2846 2846 198 1 9606 Homo sapiens -0.020172993560890973 AMVDPAQTVEQR Unmodified 1343.6503 0.65034921 337 A0A024R5F4;P50416;B2RAQ8;P50416-2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 0 3.5 0.5 1 1 44.311 44.369 2 0.0003489 11628 20230619_1882_Aki_TMTPro18x_K_F3 135.8 118.32 43956 41814 46101 48435 64879 77989 70105 62981 82691 51705 55900 65351 72487 52145 55565 70722 69084 73899 40702 38319 46975 48750 66096 76254 70704 65078 82377 53345 59395 65290 72612 55245 57629 70897 66001 70138 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86642000 1891 337 1793 3493;3494 2847 2847 1 9606 Homo sapiens -0.007729954934575289 AMVEYEIDLQK Unmodified 1337.6537 0.65370325 261 A0A024R3T8;P09874;B4E0E1;B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 6 0.816 1 1 1 58.989 59.045 3 0.00017413 17509 20230619_1885_Aki_TMTPro18x_K_F5 113.46 80.186 74082 69638 77897 79195 69833 90549 78986 80216 87073 91277 88697 80697 94914 79154 89193 94075 88121 94373 68594 63810 78714 79360 73518 90449 79398 82948 88357 91341 91154 82381 96381 82516 90769 94304 84368 89610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162610000 1892 261 1794 3495;3496;3497 2848 2848 1 9606 Homo sapiens -0.0016174543948181963 AMVSNAQLDNEK Unmodified 1318.6187 0.61871473 1030 A0A0F7NGI8;Q32MZ4-3;Q32MZ4-2;Q32MZ4;B4DPC0;Q05D04;A0A8V8TLX7;Q32MZ4-4;C9JSU1;A0A1S5UZ17;A0A024R2K4;Q9Y608-2;Q9Y608-4;Q9Y608-5;Q9Y608 LRRFIP1;LRRFIP2 Leucine-rich repeat flightless-interacting protein 1;Leucine-rich repeat flightless-interacting protein 2 yes no 0 0 0 4 0 1 44.891 44.935 3 0.001109 11700 20230619_1883_Aki_TMTPro18x_K_F4 87.216 73.537 56497 44372 55547 55583 65054 63992 61733 66778 72947 72099 73239 85500 76924 63271 71884 84829 82990 79622 52220 40723 56637 55335 66684 64154 62805 68150 73721 72965 75377 85406 78151 67125 73868 84572 79273 75693 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55310000 1893 1030 1795 3498 2849 2849 1 9606 Homo sapiens -0.027849882473901744 AMYLPDTLSPADQLK Oxidation (M) 1677.8284 0.82837315 2831 D3DVQ1;O95202 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes no 0 1 0 7 0 1 58.786 58.836 3 0.00051086 17330 20230619_1887_Aki_TMTPro18x_K_F7 81.908 61.527 33481 31138 32260 36631 30715 37261 39288 37792 41960 37261 44940 39485 43241 34582 41816 47086 37772 42285 30976 28542 32884 36554 32281 37639 39200 38568 42681 37759 45861 39864 44093 36496 42356 46833 36211 40197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129490000 1894 2831 1796 3499 2850 2850 1693 1 9606 Homo sapiens 0.016572099150607755 AMYPDYFAK Oxidation (M) 1120.4899 0.48993238 1518 A0A3B3IT57;A0A7I2V620;E9PH64;B7Z7N1;E7EWZ0;E9PF49;Q9Y6M9;Q9UQS5 NDUFB9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes no 0 1 0 7 0 1 52.688 52.759 3 0.013416 14835 20230619_1887_Aki_TMTPro18x_K_F7 65.305 56.484 50685 49495 50454 55153 67279 68460 64818 65383 70451 49781 60073 53241 55655 48602 62387 58425 56191 56152 46922 45338 51552 55420 68437 68170 65659 66583 70967 51288 61907 53797 57267 50795 62958 58445 53823 53358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59338000 1895 1518 1797 3500 2851 2851 1007 1 9606 Homo sapiens -0.06549298419713523 ANAAAYLQHLCFENEGVK Unmodified 2033.9629 0.96290957 2756 C9JJX6;E9PDC3;O00192-2;O00192;B9EH95 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome yes no 0 0 0 8 0 1 57.515 57.567 3 1.707E-09 16828 20230619_1888_Aki_TMTPro18x_K_F8 128.69 117.42 34488 31900 34992 42118 43835 49438 49015 53438 52621 37608 40293 45754 48236 38579 49654 49963 44782 52145 31920 29276 35691 41782 44971 49509 49222 53876 52872 39115 42326 45855 49029 40642 50202 50146 42945 49478 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14068000 1896 2756 1798 3501 2852 2852 1 9606 Homo sapiens -0.012713366103525914 ANACNSVIK Unmodified 975.48076 0.48076468 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 0 0 8 0 1 39.694 39.684 2 0.00049454 9332 20230619_1888_Aki_TMTPro18x_K_F8 147.2 87.994 37075 22648 57147 50700 79909 108190 59766 81686 75532 16381 24697 22143 17653 17634 47006 8794.3 27542 16455 34382 20976 56709 49581 80795 104280 61945 83422 73844 20341 27466 22111 19662 17867 45989 9537.8 26463 15588 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33815000 1897 1076 1799 3502 2853 2853 1 9606 Homo sapiens -0.00795646985352505 ANAEELANNLK Unmodified 1185.599 0.59896556 4199 Q86XP3;Q86XP3-2;B3KTL4;B3KX23;T2DQ69;B3KV84 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 0 0 5 0 1 50.343 50.419 3 0.024377 13917 20230619_1885_Aki_TMTPro18x_K_F5 57.802 41.664 77423 65676 69223 76428 75613 100290 101310 94842 111860 68046 85458 85458 91444 81663 79613 98994 90679 94488 71544 60213 71188 76619 78871 99428 100920 96561 112110 70829 89186 85932 92626 85238 81884 98895 86680 89779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49297000 1898 4199 1800 3503 2854 2854 1 9606 Homo sapiens 0.01359003804122949 ANAEYMSPSGK Unmodified 1153.5074 0.50737336 2346 B7Z9F3;B3KM74;O75431-2;O75431;C9JAZ1 MTX2 Metaxin-2 yes no 0 0 0 6 0 1 42.167 42.261 2 2.431E-05 10454 20230619_1886_Aki_TMTPro18x_K_F6 131.82 105.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1899 2346 1801 3504 2855 2855 1 9606 Homo sapiens -0.06324002884707625 ANAQVLGNNSR Unmodified 1142.5792 0.57923317 1999 A8K0P8;Q68CQ4 DIEXF Digestive organ expansion factor homolog yes no 0 0 0 7.5 0.5 1 1 34.344 34.378 2 0.00046931 7060 20230619_1887_Aki_TMTPro18x_K_F7 117.02 100.25 20089 8878.3 22271 26975 35249 35752 27867 29321 28157 21531 30513 33254 29861 29703 26460 15531 33293 28861 18539 8291.3 22662 25818 35352 35306 28540 30192 28741 22549 31185 33077 30366 29999 27277 16626 31757 27288 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15863000 1900 1999 1802 3505;3506 2856;2857 2856 2 9606 Homo sapiens 0.013646725840544605 ANATVDGLEQGYVVCPSEKR Unmodified 2192.0532 0.053181143 4606 Q9NVP1;Q4ZG72;Q8N254;Q59FR7 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 0 1 6 0 1 49.593 49.671 3 1.7474E-36 13816 20230619_1886_Aki_TMTPro18x_K_F6 220.33 199.96 27396 25472 26670 22022 23868 27237 25119 27011 27498 31667 33064 21953 28596 21377 25714 24448 20820 19225 25348 23289 27080 22630 25058 27162 25352 27714 28116 31450 33385 22734 29154 22248 25922 24237 19957 18321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30613000 1901 4606 1803 3507 2858 2858 1 9606 Homo sapiens 0.004836679274376365 ANCIDSTASAEAVFASEVK Unmodified 1968.9099 0.90987095 3487 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R299 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 0 0 3.5 1.12 1 1 1 1 60.96 60.987 3 7.3978E-15 18299 20230619_1885_Aki_TMTPro18x_K_F5 161.35 147.52 275040 247320 275790 316050 270380 252800 337280 321850 288310 309300 304490 324680 284430 269000 343150 387500 345950 404930 254480 226920 280240 312750 282490 262150 334710 323850 297250 313520 311120 327150 293930 285490 348340 388290 331390 384210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1588299999.9999998 1902 3487 1804 3508;3509;3510;3511 2859;2860;2861 2861 3 9606 Homo sapiens -0.03582759183677808 ANCIDSTASAEAVFASEVKK Unmodified 2097.0048 0.0048339665 3487 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R299 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 0 1 7 0 1 57.701 57.753 3 8.7785E-12 16904 20230619_1887_Aki_TMTPro18x_K_F7 108.71 100.42 28339 27979 28710 31685 25712 25812 31093 29874 32788 38117 40354 30601 36585 29895 38403 39681 31409 33485 26241 25632 29104 31630 27063 26661 31103 30467 33623 37840 40823 31422 37521 31383 38643 39370 30134 31862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10563000 1903 3487 1805 3512 2862 2862 1 9606 Homo sapiens 0.00021174287485337118 ANCIDSTASAEAVFASEVR Unmodified 1996.916 0.91601896 1973 A6NHQ2 FBLL1 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 yes yes 0 0 0 3 0 1 58.645 58.676 3 2.5816E-08 17870 20230619_1882_Aki_TMTPro18x_K_F3 91.725 80.285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1904 1973 1806 3513 2863 2863 1 9606 Homo sapiens -0.042562409521679 ANCPCISR Unmodified 976.42187 0.42186959 1947 A4FUT8;Q7LBC6;Q7LBC6-2;B4E2P8;Q7LBC6-3 JMJD1B;KDM3B Lysine-specific demethylase 3B yes no 0 0 0 6.5 0.5 1 1 32.59 32.652 2 0.034031 6366 20230619_1887_Aki_TMTPro18x_K_F7 76.478 53.697 30183 17190 29742 31476 38614 41922 30156 33486 32202 25937 32627 30138 36595 30392 28074 20412 40377 37592 27853 15874 30387 30718 39177 41379 30980 34581 32699 26764 33604 30411 36821 30847 29328 21661 38494 35533 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11048000 1905 1947 1807 3514;3515 2864 2864 1 9606 Homo sapiens -0.06728446551346678 ANCSDNEFTQALTAAIPPESLTR Unmodified 2505.1806 0.1805665 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 0 0 6 0.816 1 1 1 62.779 62.823 3 8.6742E-14 19386 20230619_1886_Aki_TMTPro18x_K_F6 140.98 132.69 82219 64917 81917 86146 75669 80240 91465 95427 92049 115970 123990 120470 145150 112240 108850 128560 132360 139450 76007 59613 83171 85192 79466 81939 91382 96978 95119 116170 126580 121840 145660 116990 112730 129480 126460 132310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 503290000 1906 3954 1808 3516;3517;3518 2865;2866 2865 2 9606 Homo sapiens -0.011816559890121425 ANDDVAQEIAER Unmodified 1329.6161 0.61607219 4244 Q8NBL1;B4DJ97 POGLUT1 Protein O-glucosyltransferase 1 yes no 0 0 0 1 0 1 43.978 43.978 3 0.013144 11873 20230619_1880_Aki_TMTPro18x_K_F1 64.798 42.6 28335 20612 24811 29280 35912 35066 32438 31976 43325 34791 37287 41972 44688 37698 34293 39339 42552 43519 26155 18948 25687 28917 36321 34952 33230 32957 43270 35253 38884 42123 44886 39117 35536 39729 40641 41287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69729000 1907 4244 1809 3519 2867 2867 1 9606 Homo sapiens -0.03555120380701737 ANDGEGGDEEAGTEEAVPR Unmodified 1901.7875 0.78750721 2234 B2R6D8;Q9H3Q1-2;Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 yes no 0 0 0 1 0 1 37.685 37.685 2 2.5301E-10 9084 20230619_1880_Aki_TMTPro18x_K_F1 176.23 153.32 6419.2 5211.1 4877.2 4183.1 3070.9 6269.8 6413.1 5765.8 7756.1 6176.5 8756 9425.6 8720.1 7524.2 7535.4 9245.9 10656 13007 5923.6 4764.4 5056.4 4343.8 3450.5 6166.9 6312.2 5937 7851.3 6322.2 8938 9360 8848.5 7918.7 7865.7 9466.5 10181 12305 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10908000 1908 2234 1810 3520 2868 2868 1 9606 Homo sapiens -0.12731504661519466 ANDLTHSLSSYLK Unmodified 1447.7307 0.73070802 2737 C9J384;D3DN44;Q9BQ75-2;Q9BQ75;B3KW72;H7C515 CMSS1;hCG_2023567 Protein CMSS1 yes no 0 0 0 1 0 1 55.275 55.275 3 0.0066438 16533 20230619_1880_Aki_TMTPro18x_K_F1 70.889 56.327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1909 2737 1811 3521 2869 2869 1 9606 Homo sapiens 0.02475189101255637 ANDPSLQEVNLNNIK Unmodified 1667.8479 0.84786304 2139 A8K9L8;Q9NZR1;Q4G0W6;G5EA42;Q9NZR1-2 TMOD2 Tropomodulin-2 yes no 0 0 0 5.5 0.5 1 1 55.42 55.49 3 1.8457E-10 16254 20230619_1886_Aki_TMTPro18x_K_F6 147.1 115.88 69810 61198 80305 94188 66022 81082 70651 71929 74609 90623 90050 105310 96707 90421 89912 97622 110530 116840 64661 56273 80570 92171 69865 82729 71163 74674 76489 91002 92069 105660 98236 94130 92727 99041 105600 110750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 236580000 1910 2139 1812 3522;3523 2870;2871 2871 2 9606 Homo sapiens 0.04065302250228342 ANDQEPCGWWLAK Unmodified 1573.6984 0.69836203 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;B4DM21;C9JAJ4 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 0 6 0.816 1 1 1 59.879 59.932 3 8.5361E-08 17768 20230619_1887_Aki_TMTPro18x_K_F7 148.68 134.72 74039 65875 87792 80211 71445 91432 78365 82444 93854 99848 85387 90545 106610 81579 75577 107540 99086 101290 68604 60413 87753 79998 75773 91375 79150 85290 94495 99693 88936 92023 106620 85866 78871 107200 94593 96261 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 348300000 1911 1029 1813 3524;3525;3526 2872 2872 1 9606 Homo sapiens -0.06553921573436128 ANDRLDTVLEK Unmodified 1272.6674 0.66737948 275;1599 A0A024R3Z1;Q6NYC5;A0A669KB77;P11137-3;P11137 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 1 4.5 0.5 1 1 46.463 46.523 3 0.0010694 12412 20230619_1883_Aki_TMTPro18x_K_F4 92.906 52.989 79102 64676 77097 76376 57216 72621 87246 90265 111380 96929 110980 129230 134860 102140 101600 158610 151440 181180 73127 59314 78204 76171 61919 74108 86990 91180 112020 98581 115010 128880 135280 109320 106970 159520 144620 171740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76075000 1912 275;1599 1814 3527;3528 2873 2873 1 9606 Homo sapiens 0.041952483839850174 ANDTTFGLAAGVFTR Unmodified 1539.7682 0.76815616 2459 B4DE91;P49189;B4DX14;P49189-3;P49189-2 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 2 0 1 60.937 60.947 2 4.8789E-10 19006 20230619_1881_Aki_TMTPro18x_K_F2 174.47 114.17 44248 29983 35524 42407 40693 45196 50987 49063 50367 46987 51764 49930 45888 44157 51770 55153 55030 59043 40804 27571 36941 41830 42144 45564 50779 49805 51379 47683 52796 50387 47339 46304 52741 55453 52649 56023 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41244000 1913 2459 1815 3529 2874 2874 1 9606 Homo sapiens 0.01986280366804749 ANDYANAVLQALSNVPPLR Unmodified 2025.0643 0.064338176 2722 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;Q53GS9-3;Q53GS9-2 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 0 0 0 5 0 1 65.571 65.615 3 1.5673E-31 20391 20230619_1885_Aki_TMTPro18x_K_F5 235.72 223.05 16741 16495 15417 15880 14139 15790 15605 17963 15299 18612 18372 20653 21999 17575 16426 18610 18367 22243 15490 15091 15754 16103 14828 16035 15656 18213 15746 18823 18875 20757 22062 18296 16921 18883 17582 21074 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116700000 1914 2722 1816 3530 2875 2875 1 9606 Homo sapiens 0.09280858083889143 ANEAYPCPCDIGHR Acetyl (Protein N-term) 1700.7035 0.70352376 2311 B2RD36;Q96DG6 CMBL Carboxymethylenebutenolidase homolog yes no 1 0 0 1.5 0.5 1 1 42.314 42.354 2 1.2577E-06 10953 20230619_1881_Aki_TMTPro18x_K_F2 94.616 88.376 17876 19233 25212 22055 17379 23903 20323 20419 15418 25364 25591 23127 21882 18047 22728 17946 22874 22207 16618 17618 24867 22077 18753 23945 20202 21235 16427 25277 25605 23393 22479 18792 23077 18292 21879 21049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64885000 1915 2311 1817 3531;3532 2876 2876 1 9606 Homo sapiens -0.11879985773089174 ANEHQGIGFLNDPR Unmodified 1566.7539 0.75390307 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A8A5YP40;B3KY55 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 4.5 0.5 1 1 42.538 42.602 3 7.155E-07 10652 20230619_1883_Aki_TMTPro18x_K_F4 111.43 91.855 123830 97782 123440 131770 136680 162200 160180 130010 173440 166690 138890 139060 145880 123500 140880 146000 158910 139780 114480 89808 125710 130620 141630 160920 160440 136090 174640 165720 144460 141820 148460 129120 144360 146010 151740 132900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 343960000 1916 462 1818 3533;3534 2877;2878 2877 2 9606 Homo sapiens -0.0068037206142435025 ANELCAAESNCSSR Unmodified 1567.6355 0.63550378 3214 O00451;E5RGR6 GFRA2 GDNF family receptor alpha-2 yes no 0 0 0 2 0 1 37.714 37.777 3 1.4634E-07 8796 20230619_1881_Aki_TMTPro18x_K_F2 142.95 138.78 12903 10431 14404 15576 26039 30295 20719 21104 27962 23311 28907 30635 28038 25993 33153 25242 33939 33428 11942 9590.8 14694 15482 26005 29292 21414 22241 28100 23683 29599 30601 28902 26924 33620 25863 32462 31665 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59291000 1917 3214 1819 3535 2879 2879 1 9606 Homo sapiens -0.125608554237715 ANELPQPPVPEPANAGK Unmodified 1727.8842 0.88424855 2144;1327 A0A1W6S962;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52 GTF2I General transcription factor II-I no no 0 0 0 5.5 0.5 1 1 51.645 51.721 3 4.0171E-06 14478 20230619_1885_Aki_TMTPro18x_K_F5 98.573 82.435 89423 73421 83519 100130 92209 102390 103920 94000 111440 106650 104310 107170 116630 89446 110150 124550 123920 118310 82643 67433 85573 98911 95414 103160 104300 96998 112850 107130 107940 108190 118290 94746 112950 124200 118400 112460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 458260000 1918 1327;2144 1820 3536;3537 2880;2881 2880 2 9606 Homo sapiens 0.04942179146905801 ANEPNHVELGR Unmodified 1234.6054 0.60544792 590 A0A024R9R3;Q9P253;H0YMC9 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes no 0 0 0 2.5 0.5 1 1 32.302 32.371 3 1.4969E-06 6671 20230619_1881_Aki_TMTPro18x_K_F2 158.06 137.77 38799 25979 42023 50083 58455 58099 55893 55894 59136 47627 59005 62847 53671 53988 56093 45282 65958 56369 35860 23990 42714 48649 59280 58062 56596 57041 60011 49056 60352 62783 55127 55488 57474 46314 62946 53457 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60662000 1919 590 1821 3538;3539 2882;2883 2882 2 9606 Homo sapiens -0.0024705824448574276 ANEVEQMIR Oxidation (M) 1104.5234 0.52335778 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 0 2 0 1 38.807 38.874 2 0.071911 9292 20230619_1881_Aki_TMTPro18x_K_F2 59.931 38.631 61274 49467 52391 62725 69867 68387 61770 70040 88935 74384 87392 99644 91531 80414 78968 94837 107200 108560 56586 45400 54269 62321 70977 68782 63601 71542 88962 75730 89980 99342 92740 84335 82164 95789 102300 102960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75548000 1920 3881 1822 3540 2884 2884 2546 1 9606 Homo sapiens -0.024722966478066155 ANEVEQMIR Unmodified 1088.5284 0.52844316 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3.5 0.5 1 1 47.674 47.734 2 0.0029507 12919 20230619_1883_Aki_TMTPro18x_K_F4 101.65 69.775 204650 162190 180390 193460 190550 205660 226700 203090 239800 241980 243660 280290 289070 242260 237390 312260 307440 304450 189010 148770 185510 193000 198090 207030 226830 208790 243800 243630 252030 281490 291180 254820 246580 312000 293460 289260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 622880000 1921 3881 1822 3541;3542 2885 2885 1 9606 Homo sapiens -0.012279927851977845 ANFENLAK Unmodified 905.46068 0.46068117 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;B3KRK4;B4E358;H0YCD9 CTTN Src substrate cortactin yes no 0 0 0 6.5 0.5 1 1 48.677 48.76 2 0.0013444 12977 20230619_1887_Aki_TMTPro18x_K_F7 144.12 91.719 331770 244420 268990 320830 334260 331310 342500 345980 411250 384830 385760 395590 430890 352310 347110 492320 423420 402870 306100 224490 279720 317800 342200 334630 346920 353480 414120 387210 398950 399840 434350 372160 359460 487050 404250 383670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 477590000 1922 1413 1823 3543;3544 2886 2886 1 9606 Homo sapiens 0.004169253463260247 ANFSLPEK Unmodified 904.46543 0.46543219 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 7.5 0.5 1 1 51.127 51.205 2 0.00066454 14007 20230619_1888_Aki_TMTPro18x_K_F8 158.87 80.104 333630 268670 300150 326180 359810 387680 418720 410520 425880 395630 411660 413680 445960 361480 414660 457120 446580 455520 308210 246480 308800 325550 370500 387890 418880 417350 432860 401160 424610 417520 452480 379740 424210 457610 427040 432640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 551450000 1923 3957 1824 3545;3546 2887;2888 2888 2 9606 Homo sapiens 0.00937809489096253 ANGMELDGR Unmodified 961.42873 0.42872911 2322;3861 Q549U1;Q13595-4;Q13595-3;Q13595;Q13595-2;Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995-3;P62995;H7BXF3 HSU53209;TRA2A;DKFZp686F18120;TRA2B Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta no no 0 0 0 2 0 1 38.142 38.205 2 0.00083402 9010 20230619_1881_Aki_TMTPro18x_K_F2 121.73 69.017 66498 52778 62051 79090 85424 95170 80100 80050 110280 90755 97279 100930 104800 82550 96970 95095 99628 95146 61443 48532 63863 77848 86808 94635 81973 83114 110080 91512 100770 101360 106310 86444 98875 95383 95266 90386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91553000 1924 3861;2322 1825 3547 2889 2889 1 9606 Homo sapiens -0.05352810399108421 ANGMELDGRR Unmodified 1117.5298 0.52984014 2322;3861 Q549U1;Q13595-4;Q13595-3;Q13595;Q13595-2;Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995-3;P62995;H7BXF3 HSU53209;TRA2A;DKFZp686F18120;TRA2B Transformer-2 protein homolog alpha;Transformer-2 protein homolog beta no no 0 0 1 4 0 1 32.774 32.831 3 4.9312E-07 6637 20230619_1883_Aki_TMTPro18x_K_F4 144.55 114.3 69113 52851 72351 70474 94932 93522 85619 86692 91962 80565 89417 86463 84252 68117 80093 74135 101560 76624 63906 48541 73543 70023 96467 92676 87070 88848 93209 81937 91621 86880 85953 71204 82655 74574 96788 72843 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39415000 1925 3861;2322 1826 3548 2890 2890 1 9606 Homo sapiens -0.024223586964126298 ANHEEVLAAGK Unmodified 1137.5778 0.57783619 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;A0A8V8TL37;Q9P1G4 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 0 0 4 0.816 1 1 1 36.93 36.993 3 8.1261E-06 8312 20230619_1883_Aki_TMTPro18x_K_F4 144.1 99.785 404360 89849 332910 362470 421990 322980 372820 371640 466060 451320 475940 484110 559850 395310 370820 534110 498170 471950 371660 85145 345420 342630 429160 330560 381670 378510 470120 452800 491300 487050 559270 418290 388320 530540 475230 449020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 866680000 1926 3373 1827 3549;3550;3551 2891;2892;2893 2892 3 9606 Homo sapiens 0.01455038495282679 ANHFFTVTDPR Unmodified 1303.6309 0.63093439 4537 Q9H9B4;D6RDG7;S4R2X2;D6RFI0;D6RAE9 SFXN1 Sideroflexin-1 yes no 0 0 0 4.5 3.5 1 1 44.015 44.024 3 0.00013848 11064 20230619_1888_Aki_TMTPro18x_K_F8 98.156 79.411 71300 46205 77905 82396 108430 117780 77522 81459 107010 89772 95874 95424 108410 90646 95279 104970 107140 105370 65894 42624 79056 80601 109410 115530 80887 85930 106920 90541 99424 96481 109630 94426 97822 105260 102380 100090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 248680000 1927 4537 1828 3552;3553 2894;2895 2895 2 9606 Homo sapiens -0.008735837220456233 ANHPMDAEVTK Oxidation (M) 1227.5554 0.55538619 3360 O95782-2;O95782;Q8N9K4 AP2A1 AP-2 complex subunit alpha-1 yes no 0 1 0 3 0 1 32.341 32.419 3 0.042832 6516 20230619_1882_Aki_TMTPro18x_K_F3 44.426 30.763 19560 7479 20049 21503 26159 18944 21272 23252 31432 22126 27414 29891 28404 20525 22892 20457 31254 26766 18030 6982.8 20411 20507 26495 19449 22049 23429 31257 22665 28365 29656 28680 21497 23819 20922 29792 25372 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9496400 1928 3360 1829 3554 2896 2896 1965 1 9606 Homo sapiens -0.049289289646594625 ANITSLG Unmodified 674.3599 0.35990449 1284 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q8NAN9 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 0 0 0 5 0.816 1 1 1 48.794 48.858 2 0.074168 13224 20230619_1885_Aki_TMTPro18x_K_F5 75.311 30.7 318870 263840 300630 297620 327470 357410 336790 328710 404620 304550 337820 333490 313450 254890 260610 320710 389210 332370 294730 241850 307290 298680 338370 356290 341100 337160 405360 310130 348570 334630 318270 269050 273340 321700 370750 315770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1387600000 1929 1284 1830 3555;3556;3557 2897;2898 2897 2 9606 Homo sapiens 0.009698933634695095 ANKLDHVVTIIK Unmodified 1349.8031 0.8030851 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3S6H7G3;A0A3Q8ATF5;Q5U8W9;A0A3Q8APW9;A0A3Q8B022;A0A3Q8APX7;A0A3S6H7Z6;A0A3Q8AIR8;B4DJ87;E9PIX6;A0A3S6H765;A0A3S6H8A6;E9PQ98;Q99873-5;E9PNR9;H0YDE4;A0A3Q8B4N0;A0A3S6H758 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 yes no 0 0 1 3 0 1 50.125 50.201 4 4.9842E-05 14192 20230619_1882_Aki_TMTPro18x_K_F3 123.64 83.05 1173100 1041200 1189200 1214500 1377700 1325400 1332700 1313500 1159100 1455600 1435300 990280 1104200 781250 1369700 826470 790210 468310 1085500 954480 1209400 1214100 1412600 1332400 1341500 1346200 1203100 1448300 1442800 1019600 1147900 815730 1353100 811970 759440 449780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3162999999.9999995 1930 1536 1831 3558 2899 2899 1 9606 Homo sapiens 0.14217567965465605 ANLEAFTVDK Unmodified 1106.5608 0.56078914 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 5.5 0.5 1 1 55.114 55.185 3 0.00054719 16107 20230619_1886_Aki_TMTPro18x_K_F6 99.522 71.78 131930 97773 115790 137130 92954 120360 124990 115470 140050 145880 142440 144120 173320 131690 135080 170340 147240 154150 121790 89863 118770 134980 99407 122800 124640 119200 141980 145760 147370 145990 173980 138350 138900 169540 140810 146560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 195090000 1931 2727 1832 3559;3560 2900;2901 2901 2 9606 Homo sapiens 0.011771178894605328 ANLEESFPR Acetyl (Protein N-term) 1103.5247 0.52473799 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7;S4R3Q4 PDCD11 Protein RRP5 homolog yes no 1 0 0 1 0 1 52.849 52.849 2 0.0017681 15528 20230619_1880_Aki_TMTPro18x_K_F1 94.114 75.02 49105 35129 36738 45049 36937 41701 47395 46025 49964 49953 52688 53691 53828 47294 40874 55463 56695 59108 45276 32260 38406 44631 38666 42518 47257 46839 50862 50380 53971 54123 54309 49426 42746 55765 54109 56093 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123630000 1932 1532 1833 3561 2902 2902 1 9606 Homo sapiens -0.022883392873836783 ANLIVLGAVPR Unmodified 1121.6921 0.69207809 2693 G5E9V7;G5E9V6;B7Z637;Q8IUR7-6;Q8IUR7-3;Q8IUR7-7;Q8IUR7-2;Q8IUR7;C9J8P8;C9JAA7;C9JBY2;Q9NZY0;Q8IUR7-8 ARMC8 Armadillo repeat-containing protein 8 yes no 0 0 0 5 0 1 57.728 57.787 2 0.00081277 17009 20230619_1885_Aki_TMTPro18x_K_F5 128.36 98.788 103850 91426 94386 101910 118170 125770 135740 138350 160860 102550 66950 62989 96777 60003 96545 115150 72899 61523 95997 83778 97092 102420 121340 125670 136510 139440 158630 104450 74433 65743 97687 64963 96974 111770 69899 59045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10545000 1933 2693 1834 3562 2903 2903 1 9606 Homo sapiens 0.13609973048028223 ANLNALDR Unmodified 885.46683 0.46682918 4132 Q6S8J3;A5A3E0;P0CG38;P0CG39;A0JP26-2;A0A0G2JMU2;Q495V5;A0A087X187;Q495V6;D7UEQ8;A0A0A6YYL3;A0A0G2JQB7;A6NC16;A0A0G2JQ08;A0A087WXQ7;A0A0D9SFE8;A0JP26;Q6S8J3-2;A0A0C4DH93;Q6S8J3-3;Q6S545;A0JP26-3;Q6S8J7;H3BUK9;B2RU33;Q6S5H5;A6NI47;Q6S5H5-2;Q6S8J7-2;A0A0G2JRD4 POTEE;POTEF;POTEI;POTEJ;POTEB3;POTEB;POTEG;POTEC;POTEH;POTEA;POTEB2;POTEM POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;POTE ankyrin domain family member B3;POTE ankyrin domain family member H;POTE ankyrin domain family member A;POTE ankyrin domain family member B2;POTE ankyrin domain family member C;POTE ankyrin domain family member G;Putative POTE ankyrin domain family member M yes no 0 0 0 4.5 0.5 1 1 38.457 38.525 2 0.0062863 8931 20230619_1885_Aki_TMTPro18x_K_F5 111.01 63.941 379450 306530 328210 361830 358950 382630 395110 348410 463750 309080 337400 277980 266860 244530 353750 297520 363080 259840 350450 281130 338330 361150 371470 384640 398200 357450 462920 313880 348810 282740 278950 256040 358350 296250 346590 247570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 447800000 1934 4132 1835 3563;3564 2904;2905 2905 2 9606 Homo sapiens 0.019514435778432926 ANLQQAIVTPLKPVDNTYYK Unmodified 2275.2212 0.22123275 4088 Q643R0;Q9ULW0;Q9ULW0-2 HCTP4;TPX2 Targeting protein for Xklp2 yes no 0 0 1 3.5 0.5 1 1 58.471 58.487 4 1.5109E-15 17846 20230619_1882_Aki_TMTPro18x_K_F3 146.1 135.44 27404 21353 22817 27036 20874 28057 22083 20778 26514 30781 33186 25433 33059 24572 25638 29660 27400 24172 25297 19600 23558 26837 21928 28118 22345 22008 27042 30415 33664 26054 33359 25658 26320 29410 26177 23029 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51108000 1935 4088 1836 3565;3566 2906 2906 1 9606 Homo sapiens 0.13463098183547118 ANMDGLK Unmodified 747.35852 0.35852428 3560 P37108;H0YLW0 SRP14 Signal recognition particle 14 kDa protein yes no 0 0 0 6 0 1 43.516 43.609 2 0.023294 11050 20230619_1886_Aki_TMTPro18x_K_F6 94.302 37.021 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1936 3560 1837 3567 2907 2907 1 9606 Homo sapiens -0.025260639969360454 ANNIDYTVHSVR Unmodified 1387.6844 0.68442653 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 6 0 1 38.255 38.331 3 4.8286E-24 8817 20230619_1886_Aki_TMTPro18x_K_F6 205.31 183.26 52995 43423 52570 54807 54690 54593 55504 52125 72666 60944 63470 62431 72910 63535 58711 78914 79288 61090 49001 39849 53473 54413 56643 55185 56442 53679 72671 61209 65944 63390 73478 66277 61191 78007 75537 58279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 380620000 1937 1552 1838 3568 2908 2908 1 9606 Homo sapiens 0.006091689897857577 ANNLHSGDNFQLNDSEIER Unmodified 2171.9832 0.98318732 662 F8VUA7;F8VQX7;Q641R2;A0A024RBB8;Q5HYM3;Q9BZF1-3;Q9BZF1-2;Q9BZF1;Q96N80 OSBPL8;DKFZp686C0249 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 yes no 0 0 0 3 0 1 44.704 44.777 3 3.3154E-17 11726 20230619_1882_Aki_TMTPro18x_K_F3 163.45 151.97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1938 662 1839 3569 2909 2909 1 9606 Homo sapiens -0.05592494416760019 ANNLSSLSK Unmodified 932.49271 0.49270958 3304 O75396;I1VE20 SEC22B Vesicle-trafficking protein SEC22b yes no 0 0 0 1 0 1 44.211 44.211 2 0.0018056 11996 20230619_1880_Aki_TMTPro18x_K_F1 112.36 58.389 38275 24029 36964 40053 44035 50561 41360 46504 52875 48890 56575 68917 66985 55296 51862 39091 75064 80346 35330 22149 37784 39242 45146 50204 42232 47840 53363 49894 58394 68498 67321 56697 54205 41893 71633 75856 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111300000 1939 3304 1840 3570 2910 2910 1 9606 Homo sapiens 0.02376293029487897 ANNSTYGLAAAVFTK Unmodified 1526.7729 0.77290718 1475 P05091;A0A384NPN7;Q53FB6;P05091-2 ALDH2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 60.749 60.765 3 3.1891E-11 18592 20230619_1883_Aki_TMTPro18x_K_F4 166.04 143.46 159300 141340 171950 179120 154170 194550 196710 191770 191710 210160 232590 259540 233530 224270 270790 227960 256480 292320 147470 129680 173450 178000 162770 195420 195780 196640 197260 212850 237070 259920 240220 232650 273680 232770 245790 276840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 209850000 1940 1475 1841 3571;3572 2911;2912;2913 2913 3 9606 Homo sapiens 0.030591645095682907 ANNYNEAVYLVR Unmodified 1424.7048 0.70482762 133 A0A024R179;Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes no 0 0 0 6.5 0.5 1 1 49.919 49.998 2 1.6157E-12 13553 20230619_1887_Aki_TMTPro18x_K_F7 195.4 175.64 172050 125380 147180 186460 155380 198980 190560 178740 209320 245200 231270 253330 290010 229640 194810 296820 255660 299340 158790 115320 151990 183300 161960 199670 190650 185830 213310 244460 238870 255980 289520 241300 203710 297010 244320 284130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 222200000 1941 133 1842 3573;3574 2914;2915 2915 2 9606 Homo sapiens 0.009463396496130372 ANPDLPILIR Unmodified 1120.6604 0.66044361 3262 O43678;O43678-2 NDUFA2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes no 0 0 0 7.5 0.5 1 1 56.665 56.722 2 8.9815E-06 16456 20230619_1888_Aki_TMTPro18x_K_F8 166.19 145.03 226720 205000 229010 255700 260590 312260 283340 282050 327810 271940 254910 269550 313800 260600 241810 331570 303140 334440 209800 188040 233140 254750 269000 310690 285670 289930 328500 275460 267600 273540 315030 272920 251050 331930 289670 317510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178180000 1942 3262 1843 3575;3576 2916 2916 1 9606 Homo sapiens 0.10493980294086214 ANPDPNCCLGVFGLSLYTTER Unmodified 2383.0937 0.093665749 2322 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995-3;P62995 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta yes no 0 0 0 8 0 1 63.304 63.327 3 6.5043000000000006E-24 19228 20230619_1888_Aki_TMTPro18x_K_F8 193.36 186.8 31408 25081 25224 33833 30852 36067 33673 33876 35783 40270 35024 43177 39842 36136 37698 46391 39032 47494 28991 23035 26280 33457 31706 36241 33849 34934 36347 40432 36244 43436 40426 38040 38497 46488 37391 45068 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 761820000 1943 2322 1844 3577 2917 2917 1 9606 Homo sapiens -0.04255733744457757 ANPFGGASHAK Unmodified 1055.5148 0.514842 2062 D6RD47;A8K517;P62266;D6RDJ2;D6RIX0;D6R9I7 RPS23 40S ribosomal protein S23 yes no 0 0 0 3.5 2.69 1 1 1 1 37.863 37.888 3 7.8899E-10 8812 20230619_1881_Aki_TMTPro18x_K_F2 191.29 146.97 1212600 926230 1021800 1088700 1243800 1308900 1294800 1264800 1577700 1054100 1164700 1042600 1384600 1019500 1128400 1417600 1331600 1081100 1119400 849620 1057600 1089200 1276100 1306100 1310800 1289500 1573300 1077400 1223000 1059800 1393300 1073600 1164700 1398600 1270300 1031300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4759700000 1944 2062 1845 3578;3579;3580;3581 2918;2919;2920 2919 3 9606 Homo sapiens -0.010694825021118959 ANPGAWILR Unmodified 996.5505 0.55049923 2154 A8KAK1;Q9NYU2-2;Q9NYU2;Q9NYU1;Q9NV86 UGGT1;UGGT2 UDP-glucose:glycoprotein glucosyltransferase 1;UDP-glucose:glycoprotein glucosyltransferase 2 yes no 0 0 0 4 0 1 54.314 54.329 2 0.0085567 15934 20230619_1883_Aki_TMTPro18x_K_F4 92.491 62.306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1945 2154 1846 3582 2921 2921 1 9606 Homo sapiens 0.05208599745549236 ANPHNYDAWFDYLR Unmodified 1780.7958 0.79576789 4045 Q8IXG0;Q69YP1;Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 crn;DKFZp762M013;CRNKL1 Crooked neck-like protein 1 yes no 0 0 0 8 0 1 59.373 59.414 3 2.8794E-07 17567 20230619_1888_Aki_TMTPro18x_K_F8 107.46 95.937 84139 67999 68596 82206 72044 79264 73522 78436 86826 92730 85310 81803 93741 73926 90357 100330 89052 99594 77676 62377 71099 81808 74657 80371 74485 80565 87714 92605 87956 83299 95201 77957 91929 100320 85290 94564 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43927000 1946 4045 1847 3583 2922 2922 1 9606 Homo sapiens -0.06339816372951645 ANPQVGVAFPHIK Unmodified 1376.7565 0.75646926 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 2.75 0.433 1 3 50.375 50.442 3;4 1.1672E-15 14281 20230619_1882_Aki_TMTPro18x_K_F3 203.51 158.9 1010200 836000 1066300 1077700 1074900 977280 1230000 1147200 1055700 1159900 1106300 952310 1058400 759100 1343700 975350 933680 893690 934620 767320 1078500 1067500 1117400 1000300 1226000 1160800 1088100 1164500 1130500 969850 1093700 801600 1336700 973370 897030 849840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2643100000 1947 3444 1848 3584;3585;3586;3587 2923;2924;2925;2926 2923 4 9606 Homo sapiens 0.08316128134174505 ANSEEFIPIFANNPR Unmodified 1717.8424 0.84238373 848 B7Z879;Q658K0;Q53FX3;A0A087WXL6;Q9H270;B3KPS8;A0A0G2JS92 VPS11;DKFZp564P2364 Vacuolar protein sorting-associated protein 11 homolog yes no 0 0 0 6 0 1 60.492 60.55 3 0.0045139 18345 20230619_1886_Aki_TMTPro18x_K_F6 67.648 56.277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1948 848 1849 3588 2927 2927 1 9606 Homo sapiens 0.012176234583876067 ANSHFATAFYQHLADSK Unmodified 1906.8962 0.89621022 2788 CON__P41361 yes yes 0 0 0 2.5 0.5 1 1 51.155 51.213 4 1.3643E-18 14666 20230619_1882_Aki_TMTPro18x_K_F3 186.97 169.48 + 99924 79675 75784 123470 129100 146200 146380 108890 221660 362470 593060 937490 442930 465340 620810 393960 517960 791540 92198 73295 80131 121210 130560 145260 148960 121020 236260 369630 587010 907730 465530 491450 621320 420010 498470 746590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1263500000 1949 2788 1850 3589;3590 2928;2929 2929 2 -0.02096204109898281 ANSHFLVSAGSDR Unmodified 1359.6531 0.6531264 4276 Q8WUA4;Q53SY8;H0Y4Q6;H7C3X9 GTF3C2 General transcription factor 3C polypeptide 2 yes no 0 0 0 6.5 0.5 1 1 37.677 37.747 3 3.1712E-05 8356 20230619_1887_Aki_TMTPro18x_K_F7 115.91 98.109 51852 34313 47363 48304 54862 58230 52754 55026 70892 62219 67803 68873 67468 57420 55799 72713 69323 61417 47855 31554 48599 47753 56361 58049 53879 56616 71050 62717 69683 69240 68328 60389 57784 72150 66143 58483 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72047000 1950 4276 1851 3591;3592 2930;2931 2931 2 9606 Homo sapiens -0.012314040443015983 ANSMGLFLQK Unmodified 1107.5747 0.57466507 3562 Q6IAX1;P37268-5;P37268;E9PNM1;B4DND3;A0A1W2PQ47;B7Z9R8;P37268-3;P37268-2;P37268-4;B4DTK0;B4DWP0 FDFT1 Squalene synthase yes no 0 0 0 3.5 0.5 1 1 58.139 58.156 3 0.0002736 17553 20230619_1883_Aki_TMTPro18x_K_F4 114.45 76.979 72223 58869 63159 60408 37582 57979 57682 52814 71726 30868 24810 17166 23331 22873 28466 31087 27804 19184 66712 53920 64526 60892 41777 58680 57418 53762 70259 32051 27562 18300 24151 23821 28832 30439 26549 18379 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51919000 1951 3562 1852 3593;3594 2932 2932 1 9606 Homo sapiens 0.025180721169135722 ANSNLVLQADR Unmodified 1199.6258 0.62584901 3312 O75643;A0A494C1A5;O75643-2 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 5.5 0.5 1 1 42.166 42.255 2 2.0448E-08 10457 20230619_1886_Aki_TMTPro18x_K_F6 172.17 134.62 246310 200230 211490 249530 287470 339450 286590 281460 377260 174610 196620 180360 181810 157050 218190 191420 207410 155920 227480 183730 219160 249020 292970 334980 291570 288680 371310 182820 209560 182250 187860 164510 220470 189950 198190 148650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 468870000 1952 3312 1853 3595;3596 2933;2934 2934 2 9606 Homo sapiens 0.034021124153241544 ANTFVAELK Unmodified 991.53385 0.53384611 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 7.5 0.5 1 1 54.957 55.023 2 0.0012346 15664 20230619_1888_Aki_TMTPro18x_K_F8 117.7 75.714 109290 92007 104180 113750 113060 131290 127680 124260 140840 138930 150380 152050 170410 140750 156890 169810 163670 163980 101030 84407 106470 113320 117190 131250 128290 127830 143130 140030 154750 153430 172610 147100 160220 169820 156530 155810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2286400000 1953 297 1854 3597;3598 2935 2935 1 9606 Homo sapiens 0.03774054068958321 ANVAVVSGAPLQGQLVAR Unmodified 1748.9897 0.98971667 481 A0A024R7Z5;O00560-3;O00560 SDCBP Syntenin-1 yes no 0 0 0 3 0 1 53.632 53.685 2 7.827400000000001E-31 15788 20230619_1882_Aki_TMTPro18x_K_F3 223.36 183.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1954 481 1855 3599 2936 2936 1 9606 Homo sapiens 0.1451814006315999 ANVEAIMLAVMK Unmodified 1288.6883 0.68831462 2146 A8KA19;O43592;A0A024RB67 XPOT Exportin-T yes no 0 0 0 3 0 1 65.059 65.093 3 0.00057596 20578 20230619_1882_Aki_TMTPro18x_K_F3 93.011 69.591 27563 26058 27400 32038 23306 30338 32360 29035 32671 26401 26917 30890 30182 25839 34227 32893 33761 35449 25511 23895 27823 31837 24803 30767 32105 29707 33016 26969 28077 30984 30899 27194 34700 33088 32319 33636 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30783000 1955 2146 1856 3600 2937 2937 1 9606 Homo sapiens 0.0555179916761972 ANVPWAEVCEK Acetyl (Protein N-term) 1343.618 0.61798644 1265 A0A6Q8PHL8;A0A6Q8PH45;A0A1B0GUA3;Q96EK5;A0A1B0GUH6;A0A1B0GU96;A0A6Q8PHE6;A0A1B0GTE2;A0A1B0GVY9;A0A6Q8PH08;A0A1B0GTE6;A0A1B0GW21;A0A0D9SFK7;A0A1B0GTX3 KIAA1279;KIF1BP KIF1-binding protein yes no 1 0 0 3 0 1 61.883 61.912 2 0.0033324 19215 20230619_1882_Aki_TMTPro18x_K_F3 64.297 50.789 43118 32266 42166 38050 35623 45444 41905 42745 49332 36870 47319 45655 43918 42734 44245 45656 44124 54038 39842 29600 42795 38067 37748 45316 42136 43698 49692 37872 48488 45880 44981 44316 44991 46299 42287 51200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100660000 1956 1265 1857 3601 2938 2938 1 9606 Homo sapiens -0.04007782896474055 ANWEAQQR Unmodified 1001.4679 0.46789181 1949 Q8TC62;E7EPK1;A4GYY8;Q3LIE9;Q16181;Q16181-2;E7ES33;B4DUD6;B4DNE4;A8K3D0;A0A024RA87;A0A023T695;G3V1Q4;B4DPQ6;Q5JXL7;A0A0U1RRM2;A4D1Y2 SEPT7;DKFZp686F17268;Nbla02942;DKFZp586I031;LOC392884 Septin-7 yes no 0 0 0 4 0.816 1 1 1 35.147 35.212 2 0.0026103 7605 20230619_1883_Aki_TMTPro18x_K_F4 123.98 93.371 365250 260760 379020 360680 466750 496960 449230 500000 599330 441760 476210 453160 538390 406780 467700 332870 570250 451490 337580 239660 385080 357840 477460 492140 458600 508680 596770 450210 496890 457770 543920 417690 481640 342850 543800 428010 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 456150000 1957 1949 1858 3602;3603;3604 2939;2940;2941 2940 3 9606 Homo sapiens -0.032783420532496166 ANYAVDAYFR Unmodified 1188.5564 0.55637247 2629;940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370;D7EZH4;B7ZAX9;B4DZC0;O60264 SMARCA1;SMARCA5 Probable global transcription activator SNF2L1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 no no 0 0 0 7.5 0.5 1 1 52.812 52.884 2 4.4532E-05 14805 20230619_1888_Aki_TMTPro18x_K_F8 147.75 111.36 513990 443000 478200 513730 502540 598620 567360 543480 599830 606460 607730 588840 670130 522950 543220 702040 662930 638560 475160 406120 489420 514170 522190 597600 569310 560740 609770 609020 625680 596610 675710 551230 562090 698580 632960 607270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 399890000 1958 940;2629 1859 3605;3606 2942;2943 2943 2 9606 Homo sapiens -0.030363465334403372 ANYDVLESQK Unmodified 1165.5615 0.56151742 3123 J3KN29;O00233;F5H5V4;F5GX23;O00233-2;F5H7X1 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes no 0 0 0 4 0 1 48.322 48.362 3 0.0012217 13240 20230619_1883_Aki_TMTPro18x_K_F4 79.659 45.793 238590 176590 215620 222990 267910 290170 283360 265700 331750 262050 307010 272000 270910 255160 247940 330620 294120 271560 220310 162120 221800 222260 274610 287750 286200 273020 333940 265520 314300 275430 276770 267530 255540 327510 280810 258640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 467340000 1959 3123 1860 3607 2944 2944 1 9606 Homo sapiens -0.014640874614769928 ANYVPALK Unmodified 874.49125 0.49125301 4290 Q8WYP5;Q8WYP5-3;Q8WYP5-2;B3KVE5 AHCTF1 Protein ELYS yes no 0 0 0 2 0 1 49.701 49.759 2 0.089351 14331 20230619_1881_Aki_TMTPro18x_K_F2 66.073 33.603 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1960 4290 1861 3608 2945 2945 1 9606 Homo sapiens 0.04898703731373644 ANYWWLR Unmodified 1007.4977 0.49773538 3534;2560 B4DP06;H7C1S2;V9HWH7;P31939;B2R7P8;P31939-2 ATIC;HEL-S-70p Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 0 5 0 1 58.247 58.303 2 0.0052937 17179 20230619_1885_Aki_TMTPro18x_K_F5 141.98 115.88 245810 219320 222850 214810 218270 294570 246230 248950 303120 102320 96639 94610 78924 77485 192370 104370 106390 82031 227240 200740 228240 218500 228400 290700 248300 253540 296670 111430 108330 95967 86616 81834 188380 103500 102450 78240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235180000 1961 2560;3534 1862 3609 2946 2946 1 9606 Homo sapiens -0.00571358317256454 APAAHPEGQLK Unmodified 1117.588 0.58800695 2110 Q53GX6;A8K7Q1;Q02818;B4DZX0;Q96BA4;B3KUR6 NUCB1 Nucleobindin-1 yes no 0 0 0 5.5 0.5 1 1 35.377 35.449 3 1.1056E-06 7710 20230619_1885_Aki_TMTPro18x_K_F5 161.19 79.24 107430 56586 93743 112230 164120 166380 148430 150050 185930 125630 159750 146920 139530 125170 127700 85417 172290 140370 99010 52341 97542 109340 164440 163670 151630 153710 186010 129050 164140 147400 142570 127780 132260 89715 164200 132860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168750000 1962 2110 1863 3610;3611 2947;2948 2947 2 9606 Homo sapiens 0.033916462205070275 APAALPALCDLLASAADPQIR Unmodified 2133.1252 0.12522387 2382 Q8TEX9-2;Q8TEX9;B3KQ33;Q59FI4;H0YN14;H0YLV0;H0YL92 IPO4 Importin-4 yes no 0 0 0 1.5 0.5 1 1 65.617 65.621 3 5.228699999999999E-38 21045 20230619_1881_Aki_TMTPro18x_K_F2 186.97 172.28 9704.8 9106.2 9852.2 10811 8813.4 10154 10640 8431.2 12099 12300 13202 12641 13996 13343 12284 12877 14026 15384 8983.1 8347.5 9986.9 10769 9289.3 10281 10666 8847 12289 12241 13524 12840 14188 13714 12621 13087 13413 14580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69263000 1963 2382 1864 3612;3613 2949;2950 2950 2 9606 Homo sapiens 0.10398627071845112 APAEVQITAEQLLR Unmodified 1537.8464 0.84640648 4045 Q8IXG0;Q69YP1;Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 crn;DKFZp762M013;CRNKL1 Crooked neck-like protein 1 yes no 0 0 0 6.5 0.5 1 1 61.244 61.291 3 0.011643 18747 20230619_1886_Aki_TMTPro18x_K_F6 64.374 45.629 61765 49694 55967 53272 52078 74375 55353 62037 92552 55326 48777 52566 58524 46503 49686 71675 62173 75788 57062 45536 57275 53804 54717 73290 56763 64013 90339 56284 52540 53319 59020 49531 51497 71769 59461 71891 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 331290000 1964 4045 1865 3614;3615 2951 2951 1 9606 Homo sapiens 0.09899712952096706 APAGQLPR Unmodified 808.45554 0.45553621 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 7.5 0.5 1 1 35.612 35.642 2 0.031639 7522 20230619_1887_Aki_TMTPro18x_K_F7 78.616 37.313 152380 101950 146090 153690 190360 209180 168510 173410 216300 123570 155070 130400 138620 110620 156350 96459 165330 120560 140690 93827 149630 151590 193730 206410 172620 178260 214880 127960 161130 131470 142830 114090 158810 98726 157790 114420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 339380000 1965 1104 1866 3616;3617 2952;2953 2952 2 9606 Homo sapiens 0.04364666274375395 APAHHPAAISTAK Unmodified 1270.6782 0.67821894 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9 RRP12 RRP12-like protein yes no 0 0 0 1 0 1 30.964 30.964 4 0.00014501 6357 20230619_1880_Aki_TMTPro18x_K_F1 101.95 79.756 26087 18639 24075 30595 36635 33459 31686 35247 35460 36620 30205 31043 38039 29322 28368 31896 42136 36192 24087 17167 24844 29929 36878 33658 32351 35903 35749 36759 31579 31692 38111 30470 29790 32242 40141 34351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35206000 1966 2355 1867 3618 2954 2954 1 9606 Homo sapiens 0.05370695548936055 APAMFNIR Unmodified 918.47456 0.47455709 3694 Q6NXR8;P61247;D6RG13;A8K4W0;B7Z3M5;E9PFI5;H0Y9Y4;H0Y8L7;D6RI02 RPS3A 40S ribosomal protein S3a yes no 0 0 0 3.5 0.5 1 1 50.948 50.999 2 0.0027252 14455 20230619_1883_Aki_TMTPro18x_K_F4 122.15 72.748 530430 552370 412980 387830 926780 2027400 743130 835970 2178700 175320 172740 219440 228470 185620 197960 242600 239160 211700 490410 504180 438290 425990 928650 1895500 801730 916940 2051500 219700 273720 220190 231060 195540 204340 241030 228240 201500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 592840000 1967 3694 1868 3619;3620 2955;2956 2956 2 9606 Homo sapiens 0.012058795737743822 APAMQPAEIQFAQR Oxidation (M) 1572.7719 0.77186132 3896 Q14684;Q14684-2;Q6PJM8 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 1 0 6.5 0.5 1 1 45.401 45.487 3 0.016268 11915 20230619_1886_Aki_TMTPro18x_K_F6 56.569 44.986 79567 55608 83706 81655 101800 104530 87935 93516 112870 87848 113500 121110 121290 100590 92755 107290 132350 121120 73538 51149 84929 80599 103900 103700 90269 96134 113520 90149 116770 120750 122210 104800 97077 108450 126170 114940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108750000 1968 3896 1869 3621;3622 2957 2957 2575 1 9606 Homo sapiens 0.008386268690401266 APAMQPAEIQFAQR Unmodified 1556.7769 0.7769467 3896 Q14684;Q14684-2;Q6PJM8 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 0 7 0 1 50.994 51.072 3 0.0012745 14086 20230619_1887_Aki_TMTPro18x_K_F7 76.262 53.923 251500 253700 232100 264200 255380 333050 268020 281550 456200 227060 235290 231230 236860 207090 250690 271750 270030 242050 232740 232240 238000 266890 264600 330330 275130 289690 444520 233080 251840 233910 242540 217760 255850 270340 257990 230310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94528000 1969 3896 1869 3623 2958;2959 2959 2 9606 Homo sapiens 0.02082930731671695 APAPAPPPSGSTSCGDRDSR Unmodified 1981.8912 0.89120119 39 A0A024QZH6;Q9H7N4 SR-A1;SCAF1 Splicing factor, arginine/serine-rich 19 yes no 0 0 1 4 0 1 32.038 32.099 3 3.9532E-05 6339 20230619_1883_Aki_TMTPro18x_K_F4 109.36 95.107 4820 2964.3 3708.2 3477.2 5749.7 4129.4 3814.3 5187.5 4175 3202.6 3344.9 3812.8 4808 4730.9 5040.7 5712.6 5226.5 4770.9 4441.5 2721.7 3884.6 3481.2 5744.8 4156 3973.2 5168.1 4202.1 3362.4 3540.8 3880.1 4877.3 4896.7 5135.3 5670.7 4995.8 4543.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7722500 1970 39 1870 3624 2960 2960 1 9606 Homo sapiens -0.060468760348612705 APAPASAPPGPSEELLR Unmodified 1658.8628 0.86278482 4756 Q9Y6C2 EMILIN1 EMILIN-1 yes yes 0 0 0 5 0 1 49.148 49.224 3 0.010932 13450 20230619_1885_Aki_TMTPro18x_K_F5 61.37 48.333 75296 68845 71166 76262 73504 90386 88070 85469 114430 87282 77526 74443 89062 67704 79461 82005 76883 89657 69644 63074 72724 76613 76676 90207 88725 87693 113560 87789 81760 75928 90028 70888 80845 82597 73674 85028 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173900000 1971 4756 1871 3625 2961 2961 1 9606 Homo sapiens 0.05970794118206868 APAPFRPASER Unmodified 1197.6255 0.62545508 319 A0A024R542;Q9C0C2;E9PKK0 TNKS1BP1 182 kDa tankyrase-1-binding protein yes no 0 0 1 1 0 1 35.038 35.038 3 0.035478 8026 20230619_1880_Aki_TMTPro18x_K_F1 48.004 15.163 33343 27724 34228 34908 37196 43727 34359 40016 49016 39498 41556 49117 42439 37262 37052 50606 74869 50732 30841 25440 34744 34778 38372 43452 35278 41105 48788 40252 43068 49017 43096 39518 39921 50604 71102 48273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31499000 1972 319 1872 3626 2962 2962 1 9606 Homo sapiens 0.03454737486117665 APARPGDQPPPPPQR Unmodified 1579.8219 0.82192306 518 A0A024R8I8;Q86UD0 C9orf140;SAPCD2 Suppressor APC domain-containing protein 2 yes no 0 0 1 6.5 0.5 1 1 31.636 31.701 3 6.728E-14 5987 20230619_1887_Aki_TMTPro18x_K_F7 177.63 154.72 29614 24731 26270 28535 24063 28911 25863 25657 32792 36968 49199 41028 45651 41506 35528 41373 56768 40538 27361 22673 26944 28512 25257 29136 26209 26747 33659 36885 49475 41514 46254 42775 37502 41524 53998 38572 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39041000 1973 518 1873 3627;3628 2963;2964 2964 2 9606 Homo sapiens 0.055204975892138464 APASEEEFQFLR Unmodified 1422.6779 0.67794416 3077 P29590;P29590-3;Q9BZY1;H3BT57;Q59H09;Q15156;P29590-13;P29590-11;P29590-8;P29590-2;P29590-9;P29590-5;P29590-12;P29590-4;P29590-10;P29590-14;B4DV67 PML;PML-RAR Protein PML yes no 0 0 0 3 0 1 56.201 56.237 2 8.8789E-05 16872 20230619_1882_Aki_TMTPro18x_K_F3 141.27 119.13 43954 37036 36868 48829 49249 54201 55555 55939 60546 54797 50982 55673 65621 51571 53763 59653 62382 65795 40596 33999 38309 48393 50357 54431 55777 56992 61034 55475 53430 56331 65927 53794 55384 60142 59627 62415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24293000 1974 3077 1874 3629 2965 2965 1 9606 Homo sapiens -0.016487689615814816 APDCHGPVLK Unmodified 1092.5386 0.53861391 4743 Q9Y546 LRRC42 Leucine-rich repeat-containing protein 42 yes yes 0 0 0 6 0 1 38.774 38.857 3 0.0095792 9091 20230619_1886_Aki_TMTPro18x_K_F6 68.847 38.772 31847 26604 34866 31004 46047 47948 41086 46057 50647 33522 40098 39286 40626 31951 40359 31899 42597 38883 29475 24393 35310 31187 46793 47158 42013 46813 50583 34751 41659 39378 41420 33218 41117 32478 40709 36871 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16078000 1975 4743 1875 3630 2966 2966 1 9606 Homo sapiens -0.003953850599373254 APDELHYTYLDTFGRPVIVAYK Unmodified 2567.306 0.30602501 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 1 1 0 1 60.612 60.612 4 6.2514E-23 18762 20230619_1880_Aki_TMTPro18x_K_F1 177.08 156.88 65359 53682 68213 77946 58482 77420 77104 73851 62711 83445 78365 93612 96560 70949 73527 89167 80692 116080 60459 49338 68991 76679 62055 78190 76249 75982 65437 84060 80563 93739 96790 74993 75666 90754 77382 109840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24404000 1976 3384 1876 3631 2967 2967 1 9606 Homo sapiens 0.08506423929520679 APDFVFYAPR Unmodified 1181.5869 0.58694431 3456;2184 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;J7M2B1;Q6PJT4;Q9UK20;Q9UJZ6;Q9UJZ8;Q9UJZ2;Q9UJU1;P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;Q05CU6;Q6PKD3;V9HWC0;P26038;A0A8V8TKR9 EZR;HEL-S-105;EZR-ROS1;MSN;VIL2;RDX;HEL70 Ezrin;Tyrosine-protein kinase receptor;Radixin;Moesin no no 0 0 0 4.5 3.5 1 1 59.148 59.168 2 0.00034527 18157 20230619_1880_Aki_TMTPro18x_K_F1 153.08 113.02 161590 182070 172780 181780 192100 203120 230770 183880 216410 158140 150800 134460 177070 143610 233900 214470 192230 213290 149860 166550 174970 183980 198830 203460 229820 188640 218540 160640 159050 138140 182550 151660 234450 214350 184470 202520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 207540000 1977 3456;2184 1877 3632;3633 2968;2969 2968 2 9606 Homo sapiens 0.0034143185159791756 APDGYIVK Unmodified 861.45962 0.45961853 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 7 0 1 47.484 47.572 2 0.015848 12461 20230619_1887_Aki_TMTPro18x_K_F7 84.568 38.938 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1978 1661 1878 3634 2970 2970 1 9606 Homo sapiens 0.023347109774249475 APDMSSSEEFPSFGAQVAPK Unmodified 2080.9412 0.94117108 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;Q6ZS03;Q96CF6;Q2HJC8 HDLBP Vigilin yes no 0 0 0 6 0 1 59.898 59.96 3 2.6525E-22 18109 20230619_1886_Aki_TMTPro18x_K_F6 173.28 156.78 42854 40098 43812 42910 34857 51273 46854 47230 50348 46297 45413 54362 51747 49436 49244 55342 55166 62284 39669 36722 44305 43235 37332 51099 46667 48504 50893 47094 47176 54636 52540 51451 50481 55891 52774 59058 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44181000 1979 292 1879 3635 2971 2971 1 9606 Homo sapiens -0.05606186149543646 APEAWDYGQGFVNEEMIR Unmodified 2110.9418 0.94183978 311 P00387-3;P00387;P00387-2;A0A8J8YWN6;A0A8I5KR71;A0A024R4X0;A0A8I5KW26;A0A8J8Z3C6;A0A8I5QKX1;Q6ZVI6;A0A8I5KYU1;A0A087WZB1 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form;NADH-cytochrome b5 reductase yes no 0 0 0 3.5 0.5 1 1 62.256 62.273 3 0.00020418 19310 20230619_1883_Aki_TMTPro18x_K_F4 78.661 69.842 12286 15532 17126 12173 9101.4 17536 14537 19204 20095 16816 16120 16704 15877 13767 18686 16662 16934 18817 11436 14179 16853 12671 10290 17356 14534 19415 19985 17119 16726 16862 16348 14454 18844 16824 16233 17843 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104350000 1980 311 1880 3636;3637 2972 2972 1 9606 Homo sapiens -0.06919346709855745 APEEPNIQVNPLGIPVNSK Unmodified 2015.0688 0.068754852 245 B2R642;A8K6A6;A0A024R3I5;P43121;B3KXZ9 MCAM Cell surface glycoprotein MUC18 yes no 0 0 0 7 0 1 60.894 60.936 3 5.484E-08 18239 20230619_1887_Aki_TMTPro18x_K_F7 118.52 99.192 23185 18895 22678 28538 21712 23907 24234 26210 32121 27979 34926 39177 41857 42368 33327 44461 44907 50374 21434 17375 23099 27951 22710 24571 24543 26677 32371 28540 36026 39388 42151 43680 34741 44944 42893 47763 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90419000 1981 245 1881 3638 2973 2973 1 9606 Homo sapiens 0.10182322506784658 APEEPNIQVNPLGIPVNSKEPEEVATCVGR Unmodified 3242.6241 0.62414104 245 B2R642;A8K6A6;A0A024R3I5;P43121;B3KXZ9 MCAM Cell surface glycoprotein MUC18 yes no 0 0 1 6 0 1 60.217 60.274 4 1.3021E-09 18229 20230619_1886_Aki_TMTPro18x_K_F6 105.54 99.937 17593 18743 21025 22017 12657 13844 22088 18647 19931 22162 23742 21953 23224 18639 22767 19370 21562 16675 16325 17173 20955 21870 14039 14739 21663 18836 20577 22191 24150 22179 23683 19375 23071 19320 20608 15885 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193010000 1982 245 1882 3639 2974 2974 1 9606 Homo sapiens 0.09253393542121557 APEGGEGAQPVPGHAR Unmodified 1528.7383 0.73825301 2864 H7BYY2;H7BZ37;H7C2V9;H7C231;E3UVQ2;H9A532;Q6W2J9-3;Q6W2J9-4;Q6W2J9-2;Q6W2J9 BCOR;BCOR-RARA BCL-6 corepressor yes no 0 0 0 2 0 1 30.436 30.501 3 3.1343E-08 5955 20230619_1881_Aki_TMTPro18x_K_F2 101.3 90.659 4504.1 2635.5 5191.1 4735.5 7691.3 5233.4 6834.1 5622.1 7983.6 6589.9 6119.9 7746.1 5929.9 6624.6 5649.3 4368.7 8992.3 6236.5 4162.7 2432.7 5247.8 4615.2 7740.9 5269 6970.1 5745.7 7993.9 6646.3 6369.9 7758.3 6060.6 6745.9 5925 4537.5 8552.3 5913.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14433000 1983 2864 1883 3640 2975 2975 1 9606 Homo sapiens -0.004966585784814015 APEPGPAGDGGPGAPAR Unmodified 1472.7008 0.70080487 4392 Q96RF0-2;Q96RF0-3;Q96RF0 SNX18 Sorting nexin-18 yes no 0 0 0 2.5 0.5 1 1 36.585 36.642 3 9.8416E-19 8221 20230619_1882_Aki_TMTPro18x_K_F3 186.42 171.86 43191 37650 44391 47235 39792 42809 47875 45810 59091 48356 59713 52705 51687 44860 48739 54182 63248 54946 39963 34541 44942 46863 41914 43700 48154 46682 59522 48884 60830 53080 52888 47020 50441 54328 60317 52211 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82971000 1984 4392 1884 3641;3642 2976;2977 2977 2 9606 Homo sapiens -0.01663749844101403 APEPTPQQVAQQQ Unmodified 1420.6947 0.69465686 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8Y7I0 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 0 3 0 1 43.045 43.111 2 0.00021334 10946 20230619_1882_Aki_TMTPro18x_K_F3 109.83 92.362 25544 20964 21513 25789 26753 24374 24119 28106 29994 33250 30647 29275 31873 26939 28793 30288 38840 33521 23590 19233 22284 25631 27282 24857 24665 28579 30282 33196 31455 29814 32354 28055 29891 30561 37028 31824 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125420000 1985 1005 1885 3643 2978 2978 1 9606 Homo sapiens 0.0011373192437531543 APEQEQAAPGPAAGGEAPK Unmodified 1774.8486 0.84859132 3759 P80723 BASP1 Brain acid soluble protein 1 yes yes 0 0 0 2.5 0.5 1 1 40.502 40.567 3 3.632E-10 9838 20230619_1882_Aki_TMTPro18x_K_F3 123.54 100.21 87560 59607 78549 79915 61363 83528 59699 60561 95602 97523 94076 167580 135530 150810 78696 172330 204230 252130 80810 54777 80284 79058 65285 83626 61456 64514 95389 98761 98827 166190 134720 157180 88476 176960 194530 238450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 605210000 1986 3759 1886 3644;3645 2979;2980 2980 2 9606 Homo sapiens -0.007839031007506492 APEQRPAPNAAPVDPTLR Unmodified 1898.9963 0.99625861 1500 A0A3B3IRP5;Q6P1J9;A0A0S2Z5M9;A0A2R8YHB3;A0A0S2Z5N1;B4DV47 CDC73 Parafibromin yes no 0 0 1 5.5 0.5 1 1 39.433 39.523 3 1.487E-06 9338 20230619_1886_Aki_TMTPro18x_K_F6 109.89 84.067 41631 32454 40060 46268 45233 51549 47022 47862 54474 55595 53107 54568 60228 48231 51313 64643 56830 58375 38472 29828 40944 45637 46646 51625 47541 49354 55052 55741 54869 55239 60803 50835 52715 64307 54332 55506 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221500000 1987 1500 1887 3646;3647 2981 2981 1 9606 Homo sapiens 0.08272033223875042 APEQTRPLR Unmodified 1066.5883 0.5883413 2851 D6REB4;Q9H074-2 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes no 0 0 1 6 0 1 29.306 29.337 3 0.03374 5554 20230619_1886_Aki_TMTPro18x_K_F6 54.608 19.097 17180 11261 18017 18371 24219 23452 21428 23374 28722 18392 28386 32326 27745 22413 23991 22437 29564 31148 15872 10375 18324 18027 24575 23323 21995 23749 28787 19290 29131 31839 28154 23454 24760 23041 28244 29486 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20257000 1988 2851 1888 3648 2982 2982 1 9606 Homo sapiens 0.05771065940348308 APFDLFENK Unmodified 1079.5288 0.52876073 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 0 6.5 0.5 1 1 62.144 62.188 3 0.0035935 18793 20230619_1887_Aki_TMTPro18x_K_F7 68.016 47.115 308610 249270 315660 331010 269730 321850 329190 312450 370250 350170 336060 351710 403720 336890 379920 421410 330220 395410 285400 228880 319500 327420 285580 325860 329790 320980 373580 352000 349550 356550 408650 352480 384260 420560 316880 375590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 197340000 1989 751 1889 3649;3650 2983;2984;2985 2985 3 9606 Homo sapiens -0.007822497936786021 APFDLFENR Unmodified 1107.5349 0.53490874 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 5.5 0.5 1 1 60.863 60.917 2 0.0025361 18447 20230619_1886_Aki_TMTPro18x_K_F6 123.16 106.38 165180 141330 157550 160890 142780 213700 172850 169180 230890 174050 159470 166310 199980 171080 188220 213150 188750 229450 152720 129550 160550 161570 150850 210940 174290 176030 228980 175610 168820 169410 202300 178600 191780 214350 180870 217610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174960000 1990 3177 1890 3651;3652 2986 2986 1 9606 Homo sapiens -0.014557315621459566 APGAEEDDSELQR Unmodified 1415.6165 0.61646612 3988 Q53F19;K7ELP6;Q53F19-2 C17orf85 Uncharacterized protein C17orf85 yes no 0 0 0 1 0 1 37.505 37.505 2 1.3358999999999998E-26 8986 20230619_1880_Aki_TMTPro18x_K_F1 226.4 188.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1991 3988 1891 3653 2987 2987 1 9606 Homo sapiens -0.07471745451539391 APGAEEYAQQDVLK Unmodified 1517.7362 0.73618733 160 A0A024R1T5;P09543-2;P09543;B4DI06;B4DFN6 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes no 0 0 0 4 0 1 50.148 50.183 3 6.5508E-05 14063 20230619_1883_Aki_TMTPro18x_K_F4 96.866 63.083 116700 90557 108590 110370 114780 127780 119640 122810 144710 131780 119140 123900 137730 125430 123480 150700 157330 147280 107820 83091 111080 110090 118920 127780 121130 126020 145030 132510 124290 126210 139410 130650 127820 150770 150130 139960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 229980000 1992 160 1892 3654 2988 2988 1 9606 Homo sapiens -0.0019713210697318573 APGAEEYAQQDVLKK Unmodified 1645.8312 0.83115034 160 A0A024R1T5;P09543-2;P09543;B4DI06;B4DFN6 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes no 0 0 1 6 0 1 48.188 48.267 3 1.5279E-07 13181 20230619_1886_Aki_TMTPro18x_K_F6 125.47 112.27 33683 30998 30138 35681 33187 41873 34817 39121 42469 36798 47359 46484 48213 40736 45495 49484 48378 46331 31143 28409 30995 35729 34336 41799 35263 40086 42995 37618 48392 46589 49046 42659 46491 49403 46246 44047 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77270000 1993 160 1893 3655 2989 2989 1 9606 Homo sapiens 0.0340680136418996 APGAGLGQDR Unmodified 940.47264 0.47264284 3617 P50402;Q5HY57 EMD Emerin yes no 0 0 0 4.5 0.5 1 1 34.582 34.651 2 5.8937E-05 7387 20230619_1883_Aki_TMTPro18x_K_F4 145.13 115.75 158310 81812 174730 194850 240550 220000 211500 219130 250220 192590 263300 263900 242690 211200 230190 127520 298520 260070 146170 75927 177190 187590 243510 220430 216150 223230 252990 198300 268620 262670 247820 215320 237450 137280 284690 245750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225540000 1994 3617 1894 3656;3657 2990 2990 1 9606 Homo sapiens 2.5420895212846517E-05 APGAIGPYSQAVLVDR Unmodified 1612.8573 0.85730551 574 A0A024R9H2;P52758 HRSP12 Ribonuclease UK114 yes no 0 0 0 8 0 1 54.167 54.238 2 6.1113E-08 15401 20230619_1888_Aki_TMTPro18x_K_F8 161.48 112.06 58264 46270 52049 51027 46075 56348 47993 42402 53986 61054 63449 68935 71541 61452 65787 72557 70746 80865 53818 42411 53291 51224 48451 56267 48488 44813 55082 60952 65050 69354 72486 64231 67311 73178 67711 76681 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64892000 1995 574 1895 3658 2991;2992 2992 2 9606 Homo sapiens 0.07539115326335377 APGDEEAQVENLITANATEPQK Unmodified 2324.1132 0.11319844 248 A0A024R3J8;Q9H0Q3 FXYD6 FXYD domain-containing ion transport regulator 6 yes no 0 0 0 2.5 0.5 1 1 61.262 61.282 3 3.4376E-23 18912 20230619_1882_Aki_TMTPro18x_K_F3 171.3 139.35 57159 51712 61561 61622 46680 70704 68022 62579 80436 63185 56038 59313 68900 56424 60904 76172 62845 76003 52922 47411 61978 61545 50386 70574 67714 64525 80229 63757 59234 60312 69531 59362 62269 76167 60202 72142 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 487140000 1996 248 1896 3659;3660 2993 2993 1 9606 Homo sapiens 0.004106370717181562 APGEQTVPALNLQNAFR Unmodified 1824.9482 0.94824579 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 1.5 0.5 1 1 59.757 59.763 2 5.0093E-30 18509 20230619_1881_Aki_TMTPro18x_K_F2 238.01 190.72 67250 56301 61872 66230 62693 70564 72209 67081 73527 77826 73278 74551 79914 75637 76623 79090 74267 91060 62152 51626 63342 66136 65320 70956 72294 69074 74869 77984 75512 75853 81238 78165 77863 80090 71197 86301 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147930000 1997 4746 1897 3661;3662 2994;2995 2995 2 9606 Homo sapiens 0.06876959303849617 APGFAHLAGLDK Unmodified 1195.635 0.63495714 1669 O75306;A0A7I2V4X8;B7Z792;O75306-2;A0A7I2YQG7;A0A7I2V596;A0A7I2V4G5;A0A7I2YQD8 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 3.25 2.77 1 2 1 51.89 51.929 3 1.2037E-07 15290 20230619_1881_Aki_TMTPro18x_K_F2 138.75 72.159 244380 188800 219570 250790 267280 320250 299820 292170 331490 218310 215560 187140 236210 201330 238040 256250 209160 225860 225700 173400 226090 249000 274980 317770 301230 298410 330980 223910 227410 192170 240530 210110 240540 254880 200520 214780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 567740000 1998 1669 1898 3663;3664;3665;3666 2996;2997;2998 2997 3 9606 Homo sapiens 0.04496505771635384 APGFAQMLK Unmodified 961.50552 0.50552287 3621 Q53HU0;P50990 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 3 0 1 56.495 56.532 2 0.0018495 16989 20230619_1882_Aki_TMTPro18x_K_F3 130.77 73.662 91398 109960 71161 57783 209870 599370 107790 112560 590220 16065 0 22987 20687 20058 33207 20508 19847 23434 84607 100190 76430 69346 208430 552810 128750 145620 548370 23528 23628 22900 21219 20797 32735 20809 19143 22214 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 92941000 1999 3621 1899 3667 2999 2999 1 9606 Homo sapiens 0.023230328880231355 APGFGDNR Unmodified 832.38277 0.3827652 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6;A0A7I2V5M1;B7Z532 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 4 0.816 1 1 1 36.604 36.668 2 0.002232 8154 20230619_1883_Aki_TMTPro18x_K_F4 130 91.679 366440 227820 323040 401970 441170 525620 460130 434180 668760 438330 514500 537660 546990 453230 445290 406250 607690 575050 338000 210170 334130 392770 450190 519610 468880 450060 662510 446400 536530 538190 552540 468100 463280 418620 579640 544520 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 675930000 2000 272 1900 3668;3669;3670 3000;3001;3002 3001 3 9606 Homo sapiens -0.04013087519047076 APGFGDNRK Unmodified 960.47773 0.47772821 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6;A0A7I2V5M1;B7Z532 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 1 3.25 2.28 1 1 1 1 36.391 36.436 3 0.00093616 8489 20230619_1880_Aki_TMTPro18x_K_F1 89.08 58.006 677060 456080 619810 668910 879260 841930 793250 807020 562070 753090 840780 774900 841470 662410 392170 546580 493770 781780 624930 419580 638450 660050 888880 837470 798000 825210 597800 764010 848510 781570 836700 681570 413270 563910 473450 738990 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3602599999.9999995 2001 272 1901 3671;3672;3673;3674 3003;3004;3005 3003 3 9606 Homo sapiens -0.0040915404786119325 APGIDDIK Unmodified 827.43888 0.43888309 2828 Q9H4A3-7;Q9H4A3;D3DUP1;F5GWT4;D3DUP2;Q9H4A3-6;Q9H4A3-2;Q9H4A3-5;A0A6Q8PFM0;A5D8Z4;Q9H4A3-4 WNK1 Serine/threonine-protein kinase WNK1 yes no 0 0 0 4 0 1 48.215 48.256 2 0.020721 13183 20230619_1883_Aki_TMTPro18x_K_F4 87.181 20.499 98733 67598 90889 92764 94411 106570 103820 100390 131220 119910 136820 123850 123160 106820 101650 139910 129550 143350 91142 62135 93049 91782 98118 106550 104980 103510 132290 120290 139380 125060 125140 112500 105510 140130 123770 136070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35889000 2002 2828 1902 3675 3006 3006 1 9606 Homo sapiens 0.018261205977523787 APGIIPR Unmodified 722.44391 0.44390889 3504 V9HW26;P25705;P25705-2;P25705-3;K7EK77;B4DGW3;K7ENJ4;K7ERX7;K7EJP1 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 4.5 3.04 1 1 1 1 41.99 42.027 2 0.039214 10311 20230619_1888_Aki_TMTPro18x_K_F8 91.093 23.06 589100 505020 524230 595980 649950 690590 725910 675140 815740 751900 795430 813360 840970 680630 717840 862000 905170 869670 544390 463060 540330 595670 667150 690940 729980 692930 825040 757750 819100 818510 850960 716200 743230 863310 864000 826070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1256400000 2003 3504 1903 3676;3677;3678;3679 3007;3008 3008 2 9606 Homo sapiens 0.07158469251032784 APGLGAFR Unmodified 787.43407 0.43407249 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2 0 1 45.874 45.955 2 0.0012926 12564 20230619_1881_Aki_TMTPro18x_K_F2 119.06 79.298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2004 3758 1904 3680 3009 3009 1 9606 Homo sapiens 0.03185281245657734 APGLGLVLER Unmodified 1023.6077 0.60767975 693 A0A024RBS6;F5H1S9;G8JLB3;E5KMT6;E5KMT5;Q9Y606-2;Q9Y606 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial yes no 0 0 0 8 0 1 55.916 55.978 2 0.0063129 16055 20230619_1888_Aki_TMTPro18x_K_F8 87.258 46.229 116440 103220 106840 112110 103120 128010 126100 122900 130540 138990 136780 131090 155290 131180 138820 158150 154230 153400 107650 94562 109330 112750 108140 128120 125960 126330 133050 139370 140830 133500 157120 136750 142410 158180 147410 145760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81029000 2005 693 1905 3681 3010 3010 1 9606 Homo sapiens 0.09682022231265819 APGPGLAQGLPQLHSLVLR Unmodified 1923.1054 0.10541513 4224 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 5.5 0.5 1 1 58.746 58.807 3 8.1726E-26 17640 20230619_1886_Aki_TMTPro18x_K_F6 217.4 193.01 41645 34989 41671 45586 42229 43324 44972 47984 54260 50467 46092 50821 53043 41672 45623 54456 55124 59979 38515 32117 42355 45138 43877 44095 45484 48762 54443 50877 48008 51254 53554 43992 47097 54796 52684 56892 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53213000 2006 4224 1906 3682;3683 3011;3012 3012 2 9606 Homo sapiens 0.18078663914025128 APGPLSK Unmodified 668.38573 0.38572531 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 8 0 1 42.225 42.228 2 0.058677 10365 20230619_1888_Aki_TMTPro18x_K_F8 82.305 16.502 70854 39758 78605 80933 102850 118410 89735 100920 116710 79014 114710 124750 103000 94060 105010 52128 115510 111260 65447 36777 79590 78752 104620 116380 92099 103690 117120 82482 117350 123400 105630 95849 107020 56559 110390 105060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40667000 2007 2263 1907 3684 3013 3013 1 9606 Homo sapiens 0.03826787605748905 APGPQAGPGPGVR Unmodified 1159.6098 0.60980502 1106 A0A804HIL0;A0A804HKM5;A0A804HK77;A0A804HIL2;A0A0S2Z4V6;A0A669KAX3;O76024 WFS1 Wolframin yes no 0 0 0 7.5 0.5 1 1 35.267 35.297 2 1.1652E-07 7429 20230619_1887_Aki_TMTPro18x_K_F7 138.4 112.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2008 1106 1908 3685;3686 3014;3015 3014 2 9606 Homo sapiens 0.03638450969083351 APGQLALFSVSDK Unmodified 1331.7085 0.70851601 3534 V9HWH7;P31939;B2R7P8;F8WEF0 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes no 0 0 0 1.5 0.5 1 1 60.688 60.693 2;3 2.8621E-10 18777 20230619_1880_Aki_TMTPro18x_K_F1 172.11 134.92 129110 107480 115220 117240 108730 132120 115450 122640 135970 136730 134950 133750 148270 124940 148120 151260 149050 152360 119290 98489 118110 117840 113800 132270 116710 126300 137370 137350 139110 135650 150890 130580 150690 151640 142630 144690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157470000 2009 3534 1909 3687;3688 3016;3017 3016 2 9606 Homo sapiens 0.05593009423478179 APGSVVELLGK Unmodified 1068.6179 0.61791009 1522 A0A3B3ITR6;O95363 FARS2 Phenylalanine--tRNA ligase, mitochondrial yes no 0 0 0 1 0 1 60.579 60.579 3 0.0067971 18766 20230619_1880_Aki_TMTPro18x_K_F1 69.979 41.252 16556 14051 14026 16668 16936 15720 16421 19353 17260 17630 21425 19723 22689 16404 18943 21309 19680 20376 15293 12885 14513 16610 17329 16061 16625 19468 17704 17963 21827 19832 22914 17300 19383 21276 18827 19360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11302000 2010 1522 1910 3689 3018 3018 1 9606 Homo sapiens 0.08634585165873432 APGTNVAMASNQAVR Unmodified 1485.7358 0.73581017 3613 P49792;Q13073 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 8 0 1 40.302 40.291 2 0.00041963 9597 20230619_1888_Aki_TMTPro18x_K_F8 102.87 76.086 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2011 3613 1911 3690 3019 3019 1 9606 Homo sapiens 0.01237169692194584 APGTPHSHTK Unmodified 1031.5148 0.514842 32 Q0QEW2;H0YHA7;A0A024QZD1;J3QQ67;Q07020-2;Q07020;G3V203;F8VUA6;F8VYV2 RPL18 60S ribosomal protein L18 yes no 0 0 0 8 0 1 23.15 23.192 4 0.0021408 3819 20230619_1888_Aki_TMTPro18x_K_F8 90.108 73.476 59873 29107 78969 78095 131610 153460 92166 130280 117860 50325 80338 118150 73979 89063 66454 35537 142280 118640 55368 27088 79425 75711 131540 148750 96071 132410 116900 57301 84161 115710 75639 89957 71691 41335 135240 111890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48075000 2012 32 1912 3691 3020 3020 1 9606 Homo sapiens 0.00034517497897468274 APGTPHSHTKPYVR Unmodified 1546.8005 0.80045934 32 Q0QEW2;H0YHA7;A0A024QZD1;J3QQ67;Q07020-2;Q07020;F8VUA6;F8VYV2 RPL18 60S ribosomal protein L18 yes no 0 0 1 3.5 0.5 1 1 29.753 29.834 5 3.1421E-08 5521 20230619_1882_Aki_TMTPro18x_K_F3 147.18 119.54 248050 256590 323160 304200 387890 348160 354890 281310 199970 328920 347500 179000 172220 103960 290960 65680 77525 26414 230320 235140 322800 303920 395610 347490 355070 293440 218820 324970 341030 186000 186260 107970 280760 65249 75884 25691 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 352630000 2013 32 1913 3692;3693 3021;3022 3021 2 9606 Homo sapiens 0.04893112560489499 APHLAYLR Unmodified 939.52904 0.5290355 2058 A8K4W5;Q59GW6;Q9BWD1;Q9BWD1-2 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes no 0 0 0 3 0 1 40.331 40.388 3 0.00030591 9748 20230619_1882_Aki_TMTPro18x_K_F3 149.4 97.404 107700 119550 92659 66965 183760 418760 132910 124630 460070 23234 15474 29414 35499 33919 31688 28700 35313 34255 99696 108970 96874 76447 184820 389470 146490 144680 431000 30457 37623 29777 35690 34553 32467 29253 33744 32481 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72781000 2014 2058 1914 3694 3023;3024 3023 2 9606 Homo sapiens 0.05685214716845621 APHQVPVQSEK Unmodified 1218.6357 0.63568542 1780 E9PKN0;B7Z7X4;E9PQ01;A0A8I5KX04;O94913 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes no 0 0 0 6 0 1 34.869 34.922 3 0.00030853 7624 20230619_1886_Aki_TMTPro18x_K_F6 101.93 78.703 16616 8090.7 19397 16041 21250 23580 19192 24150 27554 16596 22251 23638 23262 21030 19714 14316 26848 20033 15347 7487.2 19479 15641 21880 23265 19742 24409 27345 17409 23127 23578 23557 21421 20468 14839 25571 18992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19358000 2015 1780 1915 3695 3025 3025 1 9606 Homo sapiens 0.03511300420700536 APIAAPEPELK Unmodified 1134.6285 0.62847478 3431 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;Q59F12;P11171-5;Q4VB87;A0A994J847;Q29RX4;A0A2R8YCW8;P11171-7;A0A2R8Y5Z6;A0A2R8Y5G2;A0A2R8Y570;A0A3B3IU06;A0A2R8YFR9;A0A2R8Y6G5;A0A3B3IUD6;A0A3B3ITC5;A0A2R8Y6T6;A0A2R8YFU8 EPB41 Protein 4.1 yes no 0 0 0 5 0 1 50.96 51.035 2 0.00014235 14211 20230619_1885_Aki_TMTPro18x_K_F5 134.25 99.147 38502 32769 36124 37271 30829 38878 39744 38330 37402 44488 50222 52848 54951 49556 45019 60201 60234 56049 35592 30037 36829 37305 32710 39177 39504 39372 38768 44872 51145 53178 55490 51763 46875 60050 57455 53295 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10559000 2016 3431 1916 3696 3026 3026 1 9606 Homo sapiens 0.06654567820260127 APIIAVTR Unmodified 839.52289 0.52288749 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 2.5 1.12 1 1 1 1 45.399 45.45 2 0.0025459 12282 20230619_1881_Aki_TMTPro18x_K_F2 125.01 87.986 2872600 2247100 2380700 2628800 3399400 3640600 3232100 3112500 3675700 3095200 3326800 3158100 3368600 2760200 3343400 3682400 3708100 3286800 2651700 2060900 2476200 2636500 3446700 3592900 3281000 3215200 3704600 3132500 3431000 3191900 3435400 2909000 3422100 3662700 3541400 3127600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 8268399999.999999 2017 370;3451 1917 3697;3698;3699;3700 3027;3028;3029;3030 3028 4 9606 Homo sapiens 0.09670696485318331 APILIATDVASR Unmodified 1225.703 0.7030367 1328;3137 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7;A0A0U1RQJ0;P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5 DDX17;DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 no no 0 0 0 4.5 3.04 1 1 1 1 55.975 56.009 2 4.7623E-13 16095 20230619_1888_Aki_TMTPro18x_K_F8 211.78 171.51 520490 426090 469730 497260 431250 508580 503740 485060 529740 551720 516500 491080 596810 482820 503340 630300 559820 547600 480900 390710 481000 496580 453270 512910 504620 499030 538010 552200 533890 501270 601990 506180 517290 626040 535000 521040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3287299999.9999995 2018 1328;3137 1918 3701;3702;3703;3704 3031;3032;3033 3033 3 9606 Homo sapiens 0.09921330631641467 APIRPDIVNFVHTNLR Unmodified 1861.0323 0.032250187 3558 Q59GY2;P36578;B4DMJ6;B4DFI6;H3BTP7;H3BU31;B4DP82 RPL4 60S ribosomal protein L4 yes no 0 0 1 5 0.816 1 1 1 53.046 53.102 4 2.7232E-25 15236 20230619_1886_Aki_TMTPro18x_K_F6 223.32 178.2 194630 148800 187600 226910 182740 306870 228920 243380 291610 303480 260160 304170 346840 295310 262240 345200 357150 430860 179840 136880 191470 223560 192380 302380 230070 254520 292520 303590 272430 308310 347340 307740 273860 350590 341310 408050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5150500000 2019 3558 1919 3705;3706;3707 3034;3035 3035 2 9606 Homo sapiens 0.13617535191383467 APIRPDIVNFVHTNLRK Unmodified 1989.1272 0.1272132 3558 Q59GY2;P36578;B4DMJ6;B4DFI6;H3BTP7;H3BU31;B4DP82 RPL4 60S ribosomal protein L4 yes no 0 0 2 7 0.707 1 2 1 51.819 51.894 4;5 3.1153E-23 14409 20230619_1887_Aki_TMTPro18x_K_F7 160.45 146.18 879260 882390 824770 790570 723770 577680 816340 829510 685140 881920 732030 534420 818540 545060 596740 881250 758100 502260 813760 806780 840280 804460 760150 607540 814270 831380 708610 877140 751200 559600 821200 580100 621110 858170 722020 482000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 8612700000 2020 3558 1920 3708;3709;3710;3711 3036;3037;3038 3037 3 9606 Homo sapiens 0.17221468662546613 APIVTVGVNNDPADVR Unmodified 1635.858 0.8580338 4409 Q9BPX3;Q6NUR1;H0Y9Z8 NCAPG Condensin complex subunit 3 yes no 0 0 0 4.5 0.5 1 1 50.984 51.037 3 1.9739E-14 14199 20230619_1885_Aki_TMTPro18x_K_F5 139.6 121.24 30720 29312 30304 30814 29528 36017 33420 33823 39070 33677 34813 37771 42158 33281 36827 41675 39912 39718 28432 26839 30815 31080 30871 35978 33650 34701 39306 34179 36261 38013 42527 34928 37738 41623 38156 37746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235310000 2021 4409 1921 3712;3713 3039 3039 1 9606 Homo sapiens 0.06553909975400529 APKPDGPGGGPGGSHMGGNYGDDR Oxidation (M) 2267.9614 0.96140602 2041 Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637-2;P35637 FUS RNA-binding protein FUS yes no 0 1 1 4.5 1.12 1 1 1 1 33.737 33.799 4 1.508E-12 7022 20230619_1885_Aki_TMTPro18x_K_F5 123.76 115.47 97005 50371 53547 73456 81613 94954 73609 75372 100520 124580 159440 168110 120930 102400 98726 108710 114740 138990 89160 46399 58550 72495 82546 93906 75533 79669 103240 124520 159110 166310 123550 108140 101740 110820 109800 131600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 577990000 2022 2041 1922 3714;3715;3716;3717 3040;3041;3042 3042 1281 3 9606 Homo sapiens -0.12185622436982158 APKPDGPGGGPGGSHMGGNYGDDR Unmodified 2251.9665 0.9664914 2041 Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637-2;P35637 FUS RNA-binding protein FUS yes no 0 0 1 4.5 0.5 1 1 36.247 36.316 4 1.2256E-34 7991 20230619_1885_Aki_TMTPro18x_K_F5 214.08 206.28 163140 76094 95327 117630 110440 151550 125080 118810 161170 216340 237550 283950 207110 185410 174190 169730 198880 229220 149920 70189 102870 115710 114400 149800 126400 126270 165340 215340 239030 281400 210790 193660 179050 174200 190260 216970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 502820000 2023 2041 1922 3718;3719 3043;3044 3044 2 9606 Homo sapiens -0.10941318574396064 APKPEDIDEEDDDVPDLVENFDEASK Unmodified 2930.2829 0.28290212 4127 Q6PJ77;Q96K17-2;Q96K17 BTF3L4 Transcription factor BTF3;Transcription factor BTF3 homolog 4 yes no 0 0 1 1 0 1 61.737 61.737 4 2.8041E-08 19202 20230619_1880_Aki_TMTPro18x_K_F1 100.29 90.495 15781 15781 18426 21464 13268 24655 16411 18834 25019 21937 25878 32811 30518 28825 20238 35032 38058 47548 14633 14484 18449 21237 14363 24525 16646 19730 25021 22349 26743 32678 30553 30194 21828 35750 36307 44994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64187000 2024 4127 1923 3720 3045 3045 1 9606 Homo sapiens -0.1050280101781027 APKPEDIDEEDDDVPDLVENFDEASKNEAN Unmodified 3358.4485 0.4484639 4127 Q6PJ77;Q96K17-2;Q96K17 BTF3L4 Transcription factor BTF3;Transcription factor BTF3 homolog 4 yes no 0 0 2 2 0 1 61.869 61.879 4 6.0135E-05 19429 20230619_1881_Aki_TMTPro18x_K_F2 72.603 66.883 26044 29596 33590 36370 38008 39900 35502 38212 31283 35406 39895 28019 27621 24596 49269 21334 23449 23453 24199 27124 33574 36219 39008 40047 35840 39069 32463 35690 39955 28679 29577 25319 48141 21707 22685 22253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62744000 2025 4127 1924 3721 3046 3046 1 9606 Homo sapiens -0.1364223901960031 APLATGEDDDDEVPDLVENFDEASK Unmodified 2690.1719 0.17189511 3480 P20290;P20290-2;A0A7I2V5Y3 BTF3 Transcription factor BTF3 yes no 0 0 0 1 0 1 63.341 63.341 3 1.0038E-13 19834 20230619_1880_Aki_TMTPro18x_K_F1 135.86 133.13 40329 31947 31089 43305 26686 44994 34695 38139 55496 56963 49049 59252 76302 63160 37771 100110 74659 84823 37213 29343 32375 42788 28472 45168 35162 39938 55153 56658 51832 60234 75216 66961 41473 98945 71147 80690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 377400000 2026 3480 1925 3722 3047 3047 1 9606 Homo sapiens -0.10558395935186127 APLDASDSGR Unmodified 987.46214 0.46213773 2814 D3DS96;Q9NRL2-2;Q9NRL2;Q59G54;B3KND8 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 0 0 0 2 0 1 35.719 35.776 2 6.4673E-05 7982 20230619_1881_Aki_TMTPro18x_K_F2 129.63 111.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2027 2814 1926 3723 3048 3048 1 9606 Homo sapiens -0.03209485355569086 APLDIPVPDPVK Unmodified 1259.7125 0.71253876 1053 A0A384NQ35;A0A0K0K1L8;Q06323-3;Q06323;Q06323-2;Q6FHU3 PSME1 Proteasome activator complex subunit 1 yes no 0 0 0 6.5 0.5 1 1 61.269 61.315 3 0.0013783 18659 20230619_1886_Aki_TMTPro18x_K_F6 84.289 67.657 73565 63468 73113 69157 77053 91661 76056 80361 99641 88132 80630 99314 101250 76746 90966 96495 85954 99987 68043 58151 74347 69700 79791 90723 77486 83057 99445 89015 84654 99479 102130 80995 92439 96834 82386 94880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 282380000 2028 1053 1927 3724;3725 3049 3049 1 9606 Homo sapiens 0.09307098917156509 APLDLDK Unmodified 770.41742 0.41741937 494 A0A024R861;O00743-2;O00743;O00743-3;A0A0S2Z482 PPP6C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 49.543 49.599 2 0.023523 13829 20230619_1883_Aki_TMTPro18x_K_F4 100.45 29.539 200680 153750 195800 181200 191020 222630 205320 201460 236450 240540 265020 252170 272890 215760 232900 277260 289530 274440 185450 141030 199160 181350 199310 221490 207230 208290 240290 241370 270780 254340 276290 227080 240890 277340 276370 260750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84037000 2029 494 1928 3726;3727 3050 3050 1 9606 Homo sapiens 0.02302735569048764 APLEVAQEH Unmodified 992.49271 0.49270958 2819 D3DSW3;O94903;A8K520;B3KMP6 PROSC Proline synthase co-transcribed bacterial homolog protein yes no 0 0 0 2 0.816 1 1 1 41.896 41.943 2 0.00038734 10715 20230619_1881_Aki_TMTPro18x_K_F2 137.62 86.427 219880 205660 208850 263850 1145800 310780 251090 264520 383930 273520 310970 317470 313950 581760 289530 310900 346460 328430 203410 188680 226000 262150 1084800 312330 308960 273670 381720 278010 322640 329220 321390 575610 298090 317990 330820 311820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 345720000 2030 2819 1929 3728;3729;3730 3051;3052 3052 2 9606 Homo sapiens -0.003837069705241447 APLGAGVIER Unmodified 981.56073 0.56072956 4202 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 yes yes 0 0 0 6 0 1 45.483 45.569 2 0.046616 11920 20230619_1886_Aki_TMTPro18x_K_F6 66.546 40.652 96021 79881 90342 91580 88022 87183 100040 100140 142160 101500 92332 86342 105430 82206 97991 109780 107680 90133 88754 73232 92205 91519 91942 88840 101440 101440 140360 102130 97607 88251 106820 86412 100370 108750 102820 85881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42567000 2031 4202 1930 3731 3053 3053 1 9606 Homo sapiens 0.06921162680123416 APLGGAPR Unmodified 737.41842 0.41842242 3920 Q6FGV9;Q15126 PMVK Phosphomevalonate kinase yes no 0 0 0 7.5 0.5 1 1 35.109 35.139 2 0.022436 7338 20230619_1887_Aki_TMTPro18x_K_F7 86.838 40.036 126340 71471 126810 146920 158570 166110 144880 149190 181520 120170 163770 146520 148460 124540 151010 81132 182240 142400 116600 66121 129360 142250 161810 166000 148010 152830 181890 123930 168080 146770 152140 127000 154820 85908 173790 134750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116290000 2032 3920 1931 3732;3733 3054;3055 3054 2 9606 Homo sapiens 0.03920994728605365 APLKPYPVSPSDK Unmodified 1397.7555 0.7554662 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;Q6P0M4;B4DVX2;Q7L4K8;Q9P1N9 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 1 2 0 1 47.274 47.349 3 0.0012215 13177 20230619_1881_Aki_TMTPro18x_K_F2 86.699 74.498 245190 190100 199430 253250 252060 237980 273560 256810 257580 296110 316380 327550 315310 244790 324020 295550 302980 247570 226290 174590 207490 250290 257920 242330 274060 262210 265830 297920 321960 328190 322020 257910 327990 293660 289710 235860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 565050000 2033 1736 1932 3734 3056 3056 1 9606 Homo sapiens 0.07249868974599849 APLPDLYPFGTMR Oxidation (M) 1492.7384 0.73843593 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 1 0 2.5 0.5 1 1 61.901 61.921 3 0.021653 19400 20230619_1881_Aki_TMTPro18x_K_F2 52.265 43.536 67274 56647 62959 70004 57842 66088 59955 75380 59834 73786 68756 74422 78439 71315 62378 81036 77122 83471 62185 51967 64272 69560 60562 67334 60408 76287 61412 74624 70578 75410 79024 74167 64631 81361 73691 79232 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142930000 2034 1328 1933 3735;3736 3057 3057 835 1 9606 Homo sapiens 0.011776250971252011 APLPDLYPFGTMR Unmodified 1476.7435 0.74352131 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 2 0 1 62.888 62.897 2 0.063882 19954 20230619_1881_Aki_TMTPro18x_K_F2 76.228 58.902 29386 28642 31571 31135 22938 30987 27554 31700 36431 40305 36607 40832 35971 34404 45050 43730 40534 44177 27222 26231 31760 31255 24687 31360 27818 32555 36644 40277 37572 41192 37188 36178 45395 43825 38852 41941 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150350000 2035 1328 1933 3737 3058 3058 1 9606 Homo sapiens 0.02421928959734032 APLPLGHIK Unmodified 944.58074 0.58073672 1222 A0A140VK27;P09960;B4DVZ8;P09960-4;Q49AK0 LTA4H Leukotriene A-4 hydrolase;Leukotriene A(4) hydrolase yes no 0 0 0 3 0 1 46.97 47.049 3 0.00055003 12783 20230619_1882_Aki_TMTPro18x_K_F3 111.04 71.89 308270 258080 284710 318260 315000 392520 341250 324740 362470 309780 312240 301130 287360 244540 332950 334790 329230 280280 284910 236760 291910 317350 325890 389600 343150 336090 365940 313730 321700 304300 296270 258800 337560 331960 314700 266970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 327560000 2036 1222 1934 3738 3059 3059 1 9606 Homo sapiens 0.10622958410749561 APLQGDHNHLFIR Unmodified 1516.7899 0.78989465 2553 B4DNM0;Q8WVC0;Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 yes no 0 0 0 8 0 1 41.067 41.06 4 0.001474 9933 20230619_1888_Aki_TMTPro18x_K_F8 85.536 68.047 71085 71538 66654 71674 75452 82455 87873 76635 103670 62818 55250 49900 56536 50478 64307 72178 60205 57395 65791 65464 68253 72551 78025 82466 88290 78351 102670 63932 59015 51328 58072 53178 65073 71334 57624 54681 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87461000 2037 2553 1935 3739 3060 3060 1 9606 Homo sapiens 0.05217129906077389 APLQQCAEDR Unmodified 1186.5401 0.54007047 2052 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;Q15003-2;C9JZP1 NCAPH Condensin complex subunit 2 yes no 0 0 0 2.5 0.5 1 1 35.832 35.889 2 1.5366E-05 7927 20230619_1882_Aki_TMTPro18x_K_F3 162.88 136.76 95390 61238 83063 87463 91186 98041 92798 93886 117340 115080 113120 111580 133920 104250 84782 93672 141960 124620 87992 56331 85544 86290 94166 98227 94240 96754 118040 115090 117090 113110 133670 107330 90261 96018 135150 118100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98177000 2038 2052 1936 3740;3741 3061;3062 3062 2 9606 Homo sapiens -0.04573795761848487 APLVLKD Unmodified 754.45889 0.45889025 4402 V9HWC2;Q99497;K7ELW0;K7EN27 HEL-S-67p;PARK7 Protein deglycase DJ-1 yes no 0 0 1 7 0.816 1 1 1 51.086 51.163 2 0.072119 13983 20230619_1888_Aki_TMTPro18x_K_F8 94.407 54.865 730360 601220 639680 686260 700430 788530 780400 751290 902220 879730 893010 942720 960550 775920 807680 1065200 845130 973950 674680 551170 658610 687560 725330 788870 785900 773560 912030 884140 919830 948640 970630 821170 827570 1059900 809140 925560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3099299999.9999995 2039 4402 1937 3742;3743;3744 3063 3063 1 9606 Homo sapiens 0.07183916328369833 APLYDLAAHEDK Unmodified 1341.6565 0.65648044 4009 Q9GZL7;Q53T99;B4DRY7 WDR12 Ribosome biogenesis protein WDR12 yes no 0 0 0 4 0 1 49.68 49.715 3 4.4777E-07 13844 20230619_1883_Aki_TMTPro18x_K_F4 153.38 131.18 276020 230090 286160 347260 270270 330930 322430 303590 351260 403910 350650 333110 454070 337470 334620 470060 409960 414890 255340 211560 290030 340610 283600 335070 322990 314830 356650 400670 364120 341710 454200 355220 347270 466720 391550 394630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 382800000 2040 4009 1938 3745 3064 3064 1 9606 Homo sapiens -0.0006815399030983826 APMVNPTLGVHEADLLK Unmodified 1803.9553 0.955305 87 Q2TB59;A0A024R0C3;Q13423;A0A590UJM2;A0A590UK29;A0A590UK15;D6RAI5;D6RHU2;A0A590UJA4;A0A590UKC7 NNT NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 7 0 1 56.935 56.991 3 0.00034748 16578 20230619_1887_Aki_TMTPro18x_K_F7 75.574 62.171 69988 41948 61491 69653 39957 45427 70498 58867 74473 55163 65029 79954 78602 82634 73194 69317 66719 79224 64543 38673 62906 67722 44046 48048 69413 59209 75173 56745 67879 80093 79630 84368 74147 70462 63985 75096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 338910000 2041 87 1939 3746 3065 3065 1 9606 Homo sapiens 0.08548555860056695 APNTPASGANGDGSMSQTQSGSTVK Oxidation (M) 2365.0452 0.045195231 2782 CON__P15636 yes yes 0 1 0 4.71 0.7 3 3 1 36.002 36.072 3;4 1.997E-08 8639 20230619_1885_Aki_TMTPro18x_K_F5 106.74 98.936 + 87812 57867 92914 85279 157670 138940 119960 141150 158570 105820 149620 159840 121320 122350 133570 115760 160780 142580 81138 53244 94848 84574 157400 136500 124340 142980 158790 110540 152770 158520 125470 126990 137000 118020 153440 135210 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1109700000 2042 2782 1940 3747;3748;3749;3750;3751;3752;3753 3066;3067;3068;3069;3070;3071 3070 1660 6 -0.08272555850635399 APNTPASGANGDGSMSQTQSGSTVK Unmodified 2349.0503 0.050280609 2782 CON__P15636 yes yes 0 0 0 6 0 1 40.552 40.644 4 1.8203E-19 9775 20230619_1886_Aki_TMTPro18x_K_F6 147.47 136.81 + 41669 22649 37745 37827 61751 61496 48960 57338 75509 49223 63277 78747 48663 51643 57483 57895 70429 71711 38419 20893 39023 37243 61909 60276 50920 58606 74832 51112 64967 77634 50644 54439 59015 58854 67270 67960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 622590000 2043 2782 1940 3754 3072 3072 1 -0.07028251988049306 APNYPTEGNHR Unmodified 1254.5741 0.5741478 267 Q658J0;A0A024R3V5;A0A024R3V7;Q9GZT8-2;Q9GZT8;E7EXA3;Q6X734;Q9GZT8-3;B8ZZI0 DKFZp762L015;NIF3L1 NIF3-like protein 1 yes no 0 0 0 3.5 0.5 1 1 30.274 30.354 3 7.4344E-08 5684 20230619_1883_Aki_TMTPro18x_K_F4 141.1 123.36 49224 41198 60717 61024 79044 80959 65809 70683 75572 65646 81142 80721 75013 74382 73373 55584 99296 86816 45611 37871 60990 60233 80227 80106 67452 72765 76629 67100 82722 81013 76770 75937 75960 57977 94668 82173 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 74535000 2044 267 1941 3755;3756 3073;3074;3075 3074 3 9606 Homo sapiens -0.04295631278591827 APNYSCVMTGSWDK Unmodified 1614.6807 0.68066306 3757 P78406;Q5J8M4;E9PQ57;E9PPG9 RAE1 mRNA export factor yes no 0 0 0 4.5 3.5 1 1 56.145 56.173 3 2.7244E-05 16237 20230619_1888_Aki_TMTPro18x_K_F8 109.84 96.858 82348 71796 91459 93507 79113 95819 91711 99551 101240 100980 97781 98189 107060 85616 106000 106330 104730 112130 76245 65892 91985 92686 83533 96771 92093 101460 102490 101870 100920 99389 108880 89870 107740 106840 100270 106410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 110360000 2045 3757 1942 3757;3758 3076;3077 3077 2 9606 Homo sapiens -0.1020900489061205 APPAPGPASGGSGEVDELFDVK Unmodified 2096.0062 0.006214175 3188 Q53HJ6;M0QXB4;O14579;O14579-2;O14579-3;M0R061 COPE Coatomer subunit epsilon yes no 0 0 0 3.5 0.5 1 1 61.3 61.304 3 0.011943 18901 20230619_1883_Aki_TMTPro18x_K_F4 48.656 28.288 22636 20007 23350 28270 25349 31078 30240 23470 30837 30474 25872 27058 32889 30948 29837 33119 35585 39072 20947 18378 23729 27885 26318 31026 30203 24715 31204 30340 27101 27751 33229 31915 30729 33570 34016 37034 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197440000 2046 3188 1943 3759;3760 3078;3079 3079 2 9606 Homo sapiens 0.0020513164795374905 APPARPVK Unmodified 834.50757 0.50757178 3807 Q07666;B4DDX2;B2R7B5;Q07666-2;B4E043;Q07666-3 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 0 0 1 3 0.816 1 1 1 33.031 33.094 3 0.039341 6832 20230619_1882_Aki_TMTPro18x_K_F3 63.565 35.391 317490 162640 461040 417540 669790 712240 441170 606380 531230 176290 333010 260010 218440 189780 412180 131810 309680 214430 293980 151170 459160 404080 672630 694760 461310 614620 526960 204280 345840 258310 235800 195050 408460 138960 296630 203140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150790000 2047 3807 1944 3761;3762;3763 3080 3080 1 9606 Homo sapiens 0.08369829688137997 APPATNPLATMSVELEEALPVTTAEGMAK Unmodified 2938.4668 0.46676069 1866 A0A994J4R3 yes yes 0 0 0 6 0 1 66.255 66.298 4 4.9933E-14 20864 20230619_1886_Aki_TMTPro18x_K_F6 127.53 121.83 16874 13826 20200 18939 15148 16103 20110 17547 15710 14622 14599 15704 15037 13438 15269 15928 16623 18100 15629 12699 20160 18673 16237 16531 19859 17765 16207 14963 15066 15817 15351 14068 15601 16085 15902 17163 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18933000 2048 1866 1945 3764 3081;3082 3081 2 9606 Homo sapiens 0.07506597678457183 APPCEYK Unmodified 863.38474 0.38473903 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5.5 0.5 1 1 39.608 39.697 2 0.043535 9366 20230619_1885_Aki_TMTPro18x_K_F5 94.262 64.689 58860 30020 70223 71951 97705 109870 82844 93404 80572 68254 92071 103050 94343 83084 85241 43875 117710 105700 54385 27866 70818 69618 98877 107730 84366 95842 82635 71392 94105 102240 95821 84354 88381 48326 112230 99779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69195000 2049 3758 1946 3765;3766 3083 3083 1 9606 Homo sapiens -0.052417948254628755 APPHELTEEEK Unmodified 1278.6092 0.6091959 3849 Q13409-2;Q13409-3;Q13409-6;Q13409;Q13409-5;Q13409-7;A0A140VKE9;B4DPZ3;Q59GU5;E7EQL5;E7EV09 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 0 2 0.816 1 1 1 38.196 38.235 3 2.853E-17 8980 20230619_1881_Aki_TMTPro18x_K_F2 229.16 196.64 161970 107960 140340 155360 155070 192300 160730 170400 230070 187300 218250 278630 256230 232820 171000 299190 333480 334360 149430 99302 144700 153410 160410 191040 163880 176050 229860 191280 226410 277140 256570 245090 185060 301140 317510 317200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 328160000 2050 3849 1947 3767;3768;3769 3084;3085 3085 2 9606 Homo sapiens -0.018964332612767976 APPNATLEHFYLTSGK Unmodified 1744.8784 0.87843489 2046 Q5SZE3;H0YKH6;Q5SZE4;Q5SZE1;H0YNU7;A8K4M4;Q96G23;Q5SZE2 CERS2 Ceramide synthase 2 yes no 0 0 0 1.5 0.5 1 1 53.518 53.532 3 3.0804E-11 15775 20230619_1880_Aki_TMTPro18x_K_F1 158.17 134.13 160040 123670 169460 199100 181360 229710 215830 217650 254500 225720 200850 214770 265880 202070 197100 274410 218650 250040 148010 113840 171790 195120 188590 229490 216750 223380 254990 227440 211490 218160 265890 212780 203260 272990 209210 237630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204180000 2051 2046 1948 3770;3771 3086;3087 3086 2 9606 Homo sapiens 0.03579080635245191 APPPSLTDCIGTVDSR Unmodified 1684.809 0.80903469 4635 Q9NZZ3;Q9NZZ3-2 CHMP5 Charged multivesicular body protein 5 yes no 0 0 0 5 0 1 50.89 50.965 3 7.3159E-09 14121 20230619_1885_Aki_TMTPro18x_K_F5 142.45 126.91 41871 26243 34886 44217 37307 42276 40868 39784 47579 42148 40000 44380 47697 35828 49529 58483 53489 59900 38607 24193 36113 43111 38689 42813 41201 40899 47793 42546 41780 44685 48504 38463 50603 58446 51184 56854 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 361140000 2052 4635 1949 3772 3088 3088 1 9606 Homo sapiens -0.00597746375888164 APPSVFAEVPQAQPVLVFK Unmodified 2023.1142 0.11424848 1234 Q2TU84;A0A140VK69;P17174;B7Z1I2 GIG18;GOT1 Aspartate aminotransferase;Aspartate aminotransferase, cytoplasmic yes no 0 0 0 3 0 2 63.672 63.702 3;4 0.00013535 20020 20230619_1882_Aki_TMTPro18x_K_F3 75.463 56.388 77010 66900 83033 80329 61165 79989 76385 87242 89187 98987 106360 109670 106730 102410 106620 106800 98578 126530 71283 61349 83510 80054 65767 81054 76620 88915 90845 99707 108370 110590 108960 106080 107990 108370 94590 119870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166520000 2053 1234 1950 3773;3774 3089;3090 3090 2 9606 Homo sapiens 0.14361592759814812 APPTACYAGAAPAPSQVK Unmodified 1755.8614 0.86140461 3466 Q99557;Q9BSC0;P17676-3;P17676-2;P17676 CEBPB CCAAT/enhancer-binding protein beta yes no 0 0 0 1 0 1 46.883 46.883 3 0.0091163 13087 20230619_1880_Aki_TMTPro18x_K_F1 61.821 49.844 24637 21679 23240 28522 25186 27119 29377 27577 32966 34855 33542 37125 41084 33224 33892 42014 42073 42409 22781 19898 23787 28215 26117 27541 29482 28347 33427 34903 34739 37449 41346 34874 35086 42075 40179 40275 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17098000 2054 3466 1951 3775 3091;3092 3091 2 9606 Homo sapiens 0.013708367577464742 APPTELLARPER Unmodified 1348.7463 0.7462985 1048 B4DKM6;B4DW02;A0A0J9YXF2 yes no 0 0 1 7 0 1 42.416 42.491 3 0.0031255 10273 20230619_1887_Aki_TMTPro18x_K_F7 74.216 37.024 54434 43014 53991 58767 79739 76745 71000 71377 82400 66888 70362 70194 75238 58711 67805 71328 75972 70621 50319 39512 55290 58271 80474 76130 72425 73152 82803 67967 72971 70733 76256 61631 69546 71430 72573 67103 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37442000 2055 1048 1952 3776 3093 3093 1 9606 Homo sapiens 0.08587520408946148 APPWVPAMGFTLAPSLGCFVGSR Oxidation (M) 2433.1973 0.19734296 2187 B1AH87;Q13850;P30536;Q8N730 TSPO;PBR Translocator protein yes no 0 1 0 6.5 0.5 1 1 64.808 64.844 3 7.23E-09 20081 20230619_1887_Aki_TMTPro18x_K_F7 113.36 107.22 63501 48251 58346 63723 70499 63942 75380 72896 72996 70743 71456 72102 80923 75541 73075 97436 72282 79488 58652 44313 59904 63089 72273 64876 75639 73802 74462 71652 73819 73319 81961 78906 74543 96491 69217 75662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187540000 2056 2187 1953 3777;3778 3094 3094 1360 1 9606 Homo sapiens 0.038072181538609584 APPWVPAMGFTLAPSLGCFVGSR Unmodified 2417.2024 0.20242834 2187 B1AH87;Q13850;P30536;Q8N730 TSPO;PBR Translocator protein yes no 0 0 0 8 0 1 66.237 66.256 3 4.0328E-44 20452 20230619_1888_Aki_TMTPro18x_K_F8 231.77 216.24 7234.7 6391.4 6506.3 8619.2 6808.1 6660.8 11441 10593 10662 7931 6780.8 8354.8 11400 9188 8635 11788 12714 12202 6687.5 5867.8 6690.7 8496.2 7160.3 6974 11233 10483 10746 8172.5 7354.4 8496.3 11361 9591.4 9070.7 11817 12122 11587 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75886000 2057 2187 1953 3779 3095 3095 1 9606 Homo sapiens 0.05051522016447052 APQCLGK Unmodified 772.39016 0.39015876 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4;A0A1W2PPE9 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 7.5 0.5 1 1 40.507 40.537 2 0.017155 9698 20230619_1888_Aki_TMTPro18x_K_F8 108.98 37.13 578790 310180 754010 757440 1051100 1059200 806470 1065700 815780 594450 849590 913760 783550 756400 742360 403060 1041000 910830 535380 287950 755680 731350 1060300 1047400 828530 1074700 831190 635680 867700 907220 800680 766940 770040 440370 992240 860200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 340650000 2058 3776 1954 3780;3781 3096;3097 3097 2 9606 Homo sapiens -0.0051407124298066265 APQEFMTSHSEAGSR Oxidation (M) 1649.7104 0.71038328 2454 B4DDP8;B4DG35;Q9BRR6-2;Q9BRR6;Q69YR1;Q9BRR6-4;Q9BRR6-3 ADPGK;DKFZp667C1917 ADP-dependent glucokinase yes no 0 1 0 3 0 1 33.098 33.169 3 9.5203E-08 6839 20230619_1882_Aki_TMTPro18x_K_F3 126.69 118.09 10344 8424.4 11601 11500 15489 13469 9812.5 13626 16171 12738 17136 20340 13863 12559 14917 15775 17671 16875 9574.2 7737.6 11730 11387 15611 13481 10435 13877 16140 13151 17413 20031 14311 13371 15307 15861 16875 16019 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20858000 2059 2454 1955 3782 3098 3098 1513 1 9606 Homo sapiens -0.08848349620870977 APQETYADIGGLDNQIQEIK Unmodified 2202.0804 0.080441751 3706 Q53XL8;Q53HB3;P62191;P62191-2;G3V4X1 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 5.5 0.5 1 1 61.435 61.486 3 8.4171E-05 18580 20230619_1885_Aki_TMTPro18x_K_F5 78.987 62.494 27487 22214 24960 24414 25908 31009 31743 31329 32245 34102 27626 31426 29293 27412 32960 33688 32021 30671 25396 20359 25583 24576 27010 30862 31678 32046 32664 34227 28677 31869 30038 28727 33403 33586 30637 29168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 336650000 2060 3706 1956 3783;3784 3099 3099 1 9606 Homo sapiens 0.027484747394737497 APQHTAVGFK Unmodified 1054.556 0.55597854 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q6IBN0;B4DV84;B4DPM7;O43242-2 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 1.5 0.5 1 1 38.336 38.367 3 2.5915E-06 9048 20230619_1881_Aki_TMTPro18x_K_F2 143.5 116.9 180800 115980 145660 166900 180280 184990 188080 183040 263430 173680 194220 191470 217720 171870 150820 265790 268020 207710 166690 106700 151530 164540 184830 185620 191400 186900 261060 176780 203420 193160 218380 182850 161620 261970 254890 198130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184410000 2061 2361 1957 3785;3786 3100;3101 3101 2 9606 Homo sapiens 0.030882785373478328 APQLHLEYR Unmodified 1125.5931 0.59309232 363 Q9HCP0;A0A024R5W3;A0A0U1RQT7;U3KQB3;Q8IXA3;K7ESB6;A0A024R604;A0A8V8TKT3;A0A0U1RR14;A0A0U1RQK2;Q9HCP0-2;P78368;A0A0U1RQY7;Q9Y6M4-3;Q9Y6M4-4;Q9Y6M4;Q9Y6M4-2;U3KQA5;A0A087WXD7;Q9Y6M4-5;A0A087WWF5 CSNK1G1;hCG_2004507;CSNK1G2;CSNK1G3 Casein kinase I isoform gamma-1;Casein kinase I isoform gamma-2;Casein kinase I isoform gamma-3 yes no 0 0 0 7 0 1 42.286 42.361 3 0.0032293 10305 20230619_1887_Aki_TMTPro18x_K_F7 73.067 55.247 51949 37018 46906 50609 49567 53332 50910 49966 63259 39208 41442 34581 41624 38796 43104 41881 44921 37565 47959 34019 48126 50017 51332 53638 51626 51003 62801 40121 43517 35504 42582 40027 43895 41808 42912 35752 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62661000 2062 363 1958 3787 3102 3102 1 9606 Homo sapiens 0.035319500831292316 APQLVGQFIAR Unmodified 1198.6822 0.68224168 2235 B4DKX4;B2R6E2;Q53EL6-2;Q53EL6 PDCD4 Programmed cell death protein 4 yes no 0 0 0 4.5 0.5 2 2 56.848 56.881 2;3 0.00019839 17002 20230619_1883_Aki_TMTPro18x_K_F4 129.38 83.049 194380 172470 185130 189160 220880 245360 235840 225770 265840 206240 217150 220490 224230 204470 257840 240110 243050 242760 179760 158010 189420 190470 227040 243430 237770 231460 267020 210050 225540 222730 230340 213260 260680 240940 232690 230550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 417110000 2063 2235 1959 3788;3789;3790;3791 3103;3104;3105 3103 3 9606 Homo sapiens 0.0908478504265986 APQMPDSQR Unmodified 1028.4709 0.47092828 4686 Q9UMS6-4;Q9UMS6-2;H0Y9Y3;Q9UMS6;Q9UMS6-3 SYNPO2 Synaptopodin-2 yes no 0 0 0 4 0 1 35.871 35.919 2 0.0033715 7899 20230619_1883_Aki_TMTPro18x_K_F4 95.608 68.121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2064 4686 1960 3792 3106 3106 1 9606 Homo sapiens -0.04216834990734242 APQSLASSNSAQAR Unmodified 1386.6852 0.68515481 1278 E7EU50;A0A804CF28;A0A7P0T9C5;A0A1B0GWD1;A8K340;B4DM53;O43602-2;O43602 DCX Neuronal migration protein doublecortin yes no 0 0 0 7 0 1 34.687 34.763 2 0.00012324 7211 20230619_1887_Aki_TMTPro18x_K_F7 106.49 87.712 14338 8612.4 20697 6743.7 3032 2159.7 3393.4 4316.7 2111.9 8373.5 9089.3 8037.9 11665 8058.7 6009.6 5091 8636.4 7342.6 13284 7883.4 20131 6948.4 4530.5 2600.2 3413.5 4373 2526.8 8220.5 9095.1 8166.9 11538 8168.8 6348.6 5295.5 8228.9 6954.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4398000 2065 1278 1961 3793 3107 3107 1 9606 Homo sapiens 0.007279636388602739 APQVDVDK Unmodified 870.4447 0.44469675 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHI7;H7C443;A0A6Q8PFZ6;A0A6Q8PF45;A0A6Q8PH49;A0A6Q8PGN7;F8WCK4;A0A6Q8PGZ9;A0A6Q8PFV5;A0A6Q8PFU7;A0A6Q8PGT3 GARS Glycine--tRNA ligase yes no 0 0 0 3 0 1 43.072 43.137 2 0.010688 10989 20230619_1882_Aki_TMTPro18x_K_F3 96.331 61.231 53456 33057 57414 54962 65119 80591 54795 68629 69298 65092 102440 127890 80501 84362 99939 49602 113540 115640 49385 30471 58096 54009 66839 79209 56379 70817 71018 67858 102790 125330 83881 86596 101750 54273 108510 109130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41030000 2066 3576 1962 3794 3108 3108 1 9606 Homo sapiens 0.004292191094236841 APQVLVLAPTR Unmodified 1163.7026 0.70264277 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 3.5 0.5 1 1 52.695 52.736 2 0.0025942 15364 20230619_1882_Aki_TMTPro18x_K_F3 93.448 67.339 388990 363540 326970 356000 409260 557130 439580 416920 613910 119510 89162 78253 91381 77140 181990 109180 112560 70672 359540 332690 338910 362840 420710 544690 446250 427640 593030 136590 116390 81586 97729 81284 179210 107300 108080 67686 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 289280000 2067 1748 1963 3795;3796 3109 3109 1 9606 Homo sapiens 0.1273395570244702 APQYHEIGR Unmodified 1069.5305 0.53049207 957 H7C3C4;B5M450;E9PFN4;C9JRP1;A0A0A0MST8;Q9Y6M7-11;Q9Y6M7-13;Q9Y6M7-8;Q9Y6M7;Q9Y6M7-12;Q9Y6M7-9;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7-2;Q9Y6M7-3;Q9Y6M7-4;Q9Y6M7-5;Q9Y6M7-10;Q9Y6M7-7 SLC4A7 Anion exchange protein;Sodium bicarbonate cotransporter 3 yes no 0 0 0 5 0 1 32.851 32.933 3 0.00019681 6753 20230619_1885_Aki_TMTPro18x_K_F5 118.67 95.525 18182 14574 16600 15011 17288 13949 17079 17602 18388 23589 22746 24831 32272 23234 20403 27385 30281 31701 16798 13350 16987 15129 17860 14293 17284 17887 18870 23544 23551 25092 32048 24267 21538 27671 28887 30059 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8343500 2068 957 1964 3797 3110 3110 1 9606 Homo sapiens -0.0014919598504548048 APRPAPGGAEQR Unmodified 1205.6265 0.62651772 3338 O94919 ENDOD1 Endonuclease domain-containing 1 protein yes yes 0 0 1 5.5 0.5 1 1 24.787 24.838 3 0.00010194 3874 20230619_1885_Aki_TMTPro18x_K_F5 103.44 72.366 17499 10817 24513 23141 28964 24575 30257 34168 33602 23532 25860 22843 31421 22451 24212 17468 31339 23992 16210 10010 24373 22372 29687 24953 30539 33938 33708 24336 27115 23213 31527 22943 25097 18026 29865 22745 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30261000 2069 3338 1965 3798;3799 3111;3112 3111 2 9606 Homo sapiens 0.0319295185502142 APRPTRPDK Unmodified 1036.5778 0.57777661 210 A0A024R2Q4;P61313;A0A2R8YEM3;E7EQV9;E7ENU7;B4DLP4;E7EX53;A0A2R8Y738;P61313-2;B4DEN1;Q76N55 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 0 0 2 2 0.816 1 1 1 28.82 28.881 4 0.020039 5068 20230619_1882_Aki_TMTPro18x_K_F3 68.847 37.773 178270 91100 248540 251390 323730 288660 266990 316040 221760 207190 281700 292920 279900 226220 254570 130570 323810 276870 164990 84809 247690 240930 327890 289510 271370 317950 230850 217660 286240 291000 284440 230730 262390 141380 308830 261590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 891520000 2070 210 1966 3800;3801;3802 3113;3114 3114 2 9606 Homo sapiens 0.06095083285936198 APSEEDSLSSVPISPYKDEPWK Unmodified 2460.1697 0.16965069 1298 B0S7P4;A0A1U9X819;Q9Y676;B4DFG6;A0A0G2JIC6 MRPS18B 28S ribosomal protein S18b, mitochondrial yes no 0 0 1 5.5 0.5 1 1 58.369 58.431 4 0.018992 17288 20230619_1885_Aki_TMTPro18x_K_F5 57.009 49.017 18637 13837 18344 18740 21812 22747 19245 19152 24360 24301 22678 21916 19894 15405 23067 20812 23423 23177 17221 12712 18710 18570 22312 22617 19714 19949 24472 24211 23225 22126 20534 16406 23407 20966 22406 21990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104020000 2071 1298 1967 3803;3804 3115 3115 1 9606 Homo sapiens -0.0020273509162507253 APSERPGTSSGTFSPVR Unmodified 1731.854 0.85401105 2394 E5RJ29;D3DSQ2;B3KRC4;Q9NYI0-2;Q9NYI0 PSD3 PH and SEC7 domain-containing protein 3 yes no 0 0 1 4.5 3.5 1 1 37.207 37.2 3 3.5869E-13 8362 20230619_1888_Aki_TMTPro18x_K_F8 145.69 119.25 47747 36747 45890 49863 49945 55877 53913 54846 59252 49107 48543 48766 51717 38472 53414 51422 59093 42453 44119 33756 46859 49348 51674 56008 54294 55946 59617 49934 50466 49183 52738 40719 54579 50978 56370 40478 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 24885000 2072 2394 1968 3805;3806 3116;3117 3117 2 9606 Homo sapiens 0.01735820481690098 APSIIFIDELDAIGTK Unmodified 1701.9189 0.91890272 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PM69;E9PKD5;E9PMD8;E9PN50 PSMC3 26S protease regulatory subunit 6A yes no 0 0 0 7 0.816 1 1 1 65.452 65.481 3 8.5171E-26 20533 20230619_1886_Aki_TMTPro18x_K_F6 228.03 199.75 88534 59353 73229 90004 76160 87617 88298 91174 99392 90791 93231 99540 101130 85681 98772 109500 102140 116090 81655 54626 75813 88294 79276 88815 88674 92902 100370 92045 96352 100200 102860 90109 100730 109990 97789 110140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 507180000 2073 4761 1969 3807;3808;3809 3118;3119 3118 2 9606 Homo sapiens 0.09602002234987594 APSKPWSQVDEATIR Unmodified 1683.858 0.8580338 4521 Q9H6S0;Q6ZMY0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes no 0 0 1 8 0 1 48.158 48.217 3 0.00025935 12762 20230619_1888_Aki_TMTPro18x_K_F8 93.181 79.519 48039 39675 48627 43625 53805 53916 54796 53323 53999 60426 57337 45010 49413 35315 64686 32181 35523 24688 44427 36360 49391 43900 55445 53754 55180 54684 55232 60194 58278 46038 51316 36616 63715 32093 34195 23568 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16365000 2074 4521 1970 3810 3120 3120 1 9606 Homo sapiens 0.043459099754272756 APSLTNDEVEEFR Unmodified 1505.6998 0.69980182 1766 B4DKX3;A0A8I5KSH6;Q13206;A0A8I5KQZ1;A0A3B3ISR7;Q86VR6;E9PIF2;Q59EC7 DDX10 Probable ATP-dependent RNA helicase DDX10 yes no 0 0 0 1.5 0.5 1 1 51.383 51.405 3 6.699E-05 14935 20230619_1880_Aki_TMTPro18x_K_F1 80.815 80.815 174720 136570 170440 197160 148960 170230 212600 188630 194660 209250 206210 199950 231100 178880 221700 212240 197120 206440 161480 125540 173380 193720 158080 174540 210090 192110 199870 210030 212150 202710 234450 187070 224190 212480 188900 196110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57320000 2075 1766 1971 3811;3812 3121;3122 3121 2 9606 Homo sapiens -0.03282009003669373 APSPEKAEEESER Unmodified 1457.6634 0.66341631 3409 P08243-2;P08243;P08243-3;B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 1 1.5 0.5 1 1 35.529 35.557 3 0.0014665 8191 20230619_1880_Aki_TMTPro18x_K_F1 106.97 92.369 54887 48563 58814 46836 55867 43631 50824 46712 36873 60491 81661 40711 34488 22276 106240 18992 26410 17759 50808 44445 59267 47472 57933 44527 51182 47882 40157 59714 79460 41657 39931 23462 101880 19362 25981 16913 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92922000 2076 3409 1972 3813;3814 3123 3123 1 9606 Homo sapiens -0.04710885900408357 APSRQDVYGPQPQVR Unmodified 1696.8645 0.86451616 1594 O60716;H0YC95;O60716-3;O60716-2;Q68DU0;C9JZR2;A0A669KB05;O60716-5;O60716-11;O60716-10;O60716-9;O60716-17;Q96FS1;O60716-21;O60716-19;O60716-13;O60716-18;O60716-6;O60716-8;O60716-4;O60716-7;A0A669KB62;O60716-20;O60716-22;O60716-23;O60716-16;O60716-24;O60716-12;O60716-15;O60716-14 CTNND1;DKFZp781O2021 Catenin delta-1 yes no 0 0 1 8 0 1 36.217 36.204 3 1.5493E-05 7968 20230619_1888_Aki_TMTPro18x_K_F8 102.52 90.906 9442.4 12609 11709 8159.5 11658 9457.4 10266 11835 9488.2 10982 11060 8699.2 10055 8113.7 12296 10050 11557 8506.7 8783 11497 11678 8653 12039 9546.2 10422 11893 9783.4 11067 11220 8923.9 10396 8493.4 12410 9990.3 11043 8107.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13085000 2077 1594 1973 3815 3124 3124 1 9606 Homo sapiens 0.043958479267757866 APSSGSAQPPEGHPGKPEPSR Unmodified 2068.9926 0.9926298 139 A0A087WWW8;A0A024R1E5;Q9Y6J0-2;Q9Y6J0;Q9NPU0;B5MEB3;Q8WTX5 CABIN1;DKFZp762G2015 Calcineurin-binding protein cabin-1 yes no 0 0 1 6 0 1 32.895 32.932 4 0.00011327 6862 20230619_1886_Aki_TMTPro18x_K_F6 64.723 55.308 2980.8 3020.4 4211.9 2925.9 3886.2 4223.9 3701 3499.1 5198.2 3902.3 4421.7 4181.8 4809.9 4194.1 3421.2 4824.1 4631.9 4882.5 2769.8 2763.2 4163.1 2984 4056.2 4158.2 3789.8 3634.9 5176.1 3935.4 4586.2 4235.8 4832.8 4358.8 3578 4836.8 4421.8 4635.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3900900 2078 139 1974 3816 3125 3125 1 9606 Homo sapiens 0.0008931865936574468 APSSLSDAVPQR Unmodified 1226.6255 0.62551466 458 A8K5G0;A0A024R7K0;M0R2Z9;Q8IX01-4;Q8IX01-3;Q8IX01;M0R3F6;B4DSQ4 SFRS14;SUGP2 SURP and G-patch domain-containing protein 2 yes no 0 0 0 6 0 1 42.706 42.8 2 0.00020269 10692 20230619_1886_Aki_TMTPro18x_K_F6 116.77 85.476 38082 26920 32619 43444 33626 40755 40739 37525 44827 39238 48954 45723 49908 41332 42410 51167 50232 43553 35142 24790 33678 42439 35082 41312 40784 38636 45565 39777 50046 46013 50545 43285 43735 50814 47940 41472 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31616000 2079 458 1975 3817 3126 3126 1 9606 Homo sapiens 0.021266926954467635 APSTPLLTVR Unmodified 1053.6182 0.61824444 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;C9IZE1;F8WF18;F8WAT3 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 2 0 1 48.612 48.677 2 0.0050068 13818 20230619_1881_Aki_TMTPro18x_K_F2 91.087 60.419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2080 4468 1976 3818 3127 3127 1 9606 Homo sapiens 0.09358004885712035 APSVANVGSHCDLSLK Unmodified 1653.8145 0.81445442 3484 P21333;P21333-2;Q60FE5;Q60FE6;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91 FLNA;FLJ00119 Filamin-A yes no 0 0 0 8 0 1 47.411 47.469 3 1.2268E-25 12476 20230619_1888_Aki_TMTPro18x_K_F8 221.47 169.74 72781 50767 56355 68778 69395 107380 73051 79228 103130 87052 85225 116330 115110 104370 73629 132400 128530 185850 67111 46654 58926 68423 71494 104900 74354 83062 102650 88520 89747 116330 114680 109580 78974 135370 122850 175750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65476000 2081 3484 1977 3819 3128 3128 1 9606 Homo sapiens 0.013699772066274818 APSVATVGSICDLNLK Unmodified 1643.8553 0.8552566 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4;A0A0C4DGA1 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 1 0 1 60.375 60.375 3 0.00011226 18696 20230619_1880_Aki_TMTPro18x_K_F1 93.237 76.705 33010 23904 29251 34460 32153 36711 31575 34228 44307 33815 34472 36673 46110 37173 32800 48688 45145 44237 30473 21979 30100 33944 33196 36880 32265 35127 44010 34315 36339 37146 46063 38939 34356 48443 43069 42067 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147860000 2082 3299 1978 3820 3129 3129 1 9606 Homo sapiens 0.05908318526257972 APSVPAAEPEYPK Unmodified 1354.6769 0.67688153 1240 F8W1A4;A0A140VK93;P54819-5;P54819-2;P54819;P54819-3;B4DLK2;G3V213;F8VZG5;A0A5F9ZHP2;F8VY04;A0A5K1VW67;F8VPP1;A0A8Q3SHW4 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 47.751 47.809 3 9.9927E-05 12995 20230619_1883_Aki_TMTPro18x_K_F4 101.39 77.099 247290 214860 250940 235170 249750 302920 274140 265030 341440 252500 260040 213850 278010 229300 218530 271070 270920 246780 228780 196860 254540 236830 260460 300290 277040 272990 340540 254960 271020 219630 280370 238280 226430 270230 258540 234740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 464850000 2083 1240 1979 3821;3822 3130;3131;3132 3130 3 9606 Homo sapiens 0.01373016669504068 APSYLEISSMR Unmodified 1252.6122 0.61217279 2144 X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9;B4DM07 GTF2I General transcription factor II-I yes no 0 0 0 7.5 0.5 1 1 53.026 53.099 2 6.6265E-06 14874 20230619_1888_Aki_TMTPro18x_K_F8 155.06 136.33 185950 166350 202360 200000 151350 218320 201260 193420 207940 232300 216620 226020 242670 206610 218890 257950 243650 260980 172170 152530 203490 199490 162910 218700 200330 200400 211960 232480 223070 229070 245730 216510 224580 258440 233000 247790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 268410000 2084 2144 1980 3823;3824 3133;3134 3134 2 9606 Homo sapiens -0.004028814081493692 APTIVGK Unmodified 684.41703 0.41702544 619 A0A0C4DGS1;A0A024RAD5;P39656;P39656-3;U3KQ84;P39656-2 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 0 1.5 0.5 1 1 44.378 44.42 2 0.047651 11867 20230619_1881_Aki_TMTPro18x_K_F2 87.284 54.355 434790 296920 489990 513510 635980 686860 570650 598160 683390 488180 734100 736490 676340 564160 718710 319580 674790 680050 402050 273720 495490 502640 647160 678990 582770 614240 690860 507140 748410 730020 693820 575150 725390 346660 646090 642070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 347540000 2085 619 1981 3825;3826 3135;3136 3136 2 9606 Homo sapiens 0.062193606398523116 APTLASLENCMK Unmodified 1333.637 0.63700733 1136 B3KQF0;A0A0S2Z5M1;Q9UGP8;B3KNE7;B3KWU4 SEC63 Translocation protein SEC63 homolog yes no 0 0 0 7.5 0.5 1 1 58.234 58.283 3 3.7247E-10 17055 20230619_1888_Aki_TMTPro18x_K_F8 155.48 138.45 62608 50538 59140 58606 56995 65303 65628 60986 70407 72521 68352 66074 71564 65218 74904 80288 81877 83222 57861 46342 60334 58630 59626 65436 65821 62918 71408 72488 70376 67361 73138 68097 76523 80587 78282 79008 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179410000 2086 1136 1982 3827;3828 3137 3137 1 9606 Homo sapiens -0.016465695970737215 APTNIVYK Unmodified 904.50182 0.5018177 2244 Q5TEJ7;B2R7E8;P15927;P15927-2;P15927-3 RPA2 Replication protein A 32 kDa subunit yes no 0 0 0 1.5 0.5 1 1 46.991 47.028 2 0.021232 13082 20230619_1881_Aki_TMTPro18x_K_F2 93.551 60.43 316600 224940 275820 260450 316370 383360 317270 330080 442590 215120 239910 186350 218310 175230 271180 242170 245240 187840 292200 206370 284130 261790 326040 376990 323580 337660 434930 223210 254480 190520 226020 184650 273220 239360 234500 179200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 223040000 2087 2244 1983 3829;3830 3138;3139 3139 2 9606 Homo sapiens 0.04574686385808491 APVAGTCYQAEWDDYVPK Unmodified 2068.92 0.9200417 2861 D9IAI1;P30086;A0A0K0K1J6;V9HW05 HEL-S-34;PEBP1;HEL-210 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 5.5 1.12 1 1 1 1 60.352 60.391 3;4 1.2217E-09 18070 20230619_1885_Aki_TMTPro18x_K_F5 137.52 132.31 95269 94351 113790 126550 99138 119850 113930 120650 136010 129060 142650 144280 138700 130730 140530 138700 150140 159770 88350 86584 113920 125040 104590 121680 114760 123450 137540 130460 145900 145310 141860 135690 143390 140450 143630 151490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 460870000 2088 2861 1984 3831;3832;3833;3834 3140;3141 3141 2 9606 Homo sapiens -0.07166151458477543 APVAIGVAAMSTAEMLTSGLK Unmodified 2017.0588 0.058783792 3573 Q5SY38;P41214;P41214-2 EIF2D Eukaryotic translation initiation factor 2D yes no 0 0 0 4.5 0.5 1 1 67.073 67.1 3 0.004781 20999 20230619_1885_Aki_TMTPro18x_K_F5 64.298 53.354 4521.7 5507.6 5548.7 4455.5 4023.1 7474 5105.8 5285.4 6567.3 7027 5339.3 7487.3 8257.6 6968.2 4735.3 5372.5 7642 6382.9 4201.7 5029.4 5525.3 4631.6 4352.4 7275.5 5133 5594 6567.6 7024.8 5674.1 7546.6 8170.1 7122.5 5039.6 5328.8 7275 6056.4 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2 7854800 2089 3573 1985 3835;3836 3142;3143 3143 2 9606 Homo sapiens 0.09093675185522443 APVDFGYVGIDSILEQMR Unmodified 2008.9928 0.99281272 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;A0A0S2Z5W9;Q9UHD8-4;Q9UHD8-8;Q9UHD8-9;Q1WWK5;A0A6Q8PHC2;K7EL40;K7EK18;K7ER14;K7ER52;K7EIE4;K7EQD7;K7EJZ2;K7ENQ5;K7EN52;K7EKN4;K7EQ08 SEPT9 Septin-9 yes no 0 0 0 7.5 0.5 1 1 66.038 66.06 3 9.3773E-10 20392 20230619_1888_Aki_TMTPro18x_K_F8 136.34 118.42 6838.3 4894.1 8353.9 7482.1 7858.6 6005.7 5914.4 6440.5 7740.4 7804.8 10876 10878 9831.1 7832.3 5462.3 9574.6 12415 10301 6329.8 4503.4 8341 7324.7 8128.3 6200.9 6143.9 6589.9 7904.9 7905.4 10956 10802 9861.1 8272.3 6036.7 9621.8 11797 9784.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137760000 2090 541 1986 3837;3838 3144 3144 1 9606 Homo sapiens 0.028676023350271862 APVDITGQFEK Unmodified 1203.6136 0.61355299 2568 B4DPV7;P49589-3;A8K067;B4DKY1;A0A024RCG3;P49589-2;P49589;A8MVQ3;B4DI19;Q53HG6 CARS Cysteine--tRNA ligase, cytoplasmic yes no 0 0 0 6 0 1 54.936 55.013 2 0.024286 16023 20230619_1886_Aki_TMTPro18x_K_F6 69.979 40.17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2091 2568 1987 3839 3145 3145 1 9606 Homo sapiens 0.01989075952269559 APVEHVVADAGAFLR Unmodified 1550.8205 0.82052608 2287 Q9ULX3;B2RAR2;H3BUR4 NOB1 RNA-binding protein NOB1 yes no 0 0 0 7 0 1 56.803 56.859 3 2.8327E-05 16538 20230619_1887_Aki_TMTPro18x_K_F7 81.311 71.623 80818 66355 61117 48388 77389 96700 64299 72063 83994 86039 87752 76897 76040 82843 84531 98968 81242 83275 74581 60629 63892 51067 78931 93591 66233 75601 84639 85970 89285 78748 78501 86013 85712 98286 77778 79254 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 703300000 2092 2287 1988 3840 3146 3146 1 9606 Homo sapiens 0.06714863500451429 APVLVALALIECGMK Unmodified 1583.8779 0.8779063 3826 Q12974-3;Q12974 PTP4A2 Protein tyrosine phosphatase type IVA 2 yes no 0 0 0 5 0 1 68.302 68.345 3 1.4371E-07 21471 20230619_1885_Aki_TMTPro18x_K_F5 123.64 112.03 6551.1 3620.4 3351 4471.7 3555.8 4124.4 4544.7 2891.1 6602.4 4113.9 3751.7 5049.7 4957.3 5539.2 6792.3 5639 5361.5 4661.5 6020.9 3327.7 3680.1 4439.1 3717.9 4169.3 4580.6 3079.9 6489.3 4130.7 4050 5097.2 5118 5694.2 6788.8 5615.9 5138.8 4440.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6846100 2093 3826 1989 3841 3147 3147 1 9606 Homo sapiens 0.10932246390143519 APVLVALALIEGGMK Unmodified 1480.8687 0.86872182 519 A0A024R8J2;B5BU78;Q93096 PTP4A1 Protein tyrosine phosphatase type IVA 1 yes no 0 0 0 5 0 1 68.314 68.357 3 0.00057656 21493 20230619_1885_Aki_TMTPro18x_K_F5 90.731 70.721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2094 519 1990 3842 3148 3148 1 9606 Homo sapiens 0.14752221096114226 APVPGTPDSLSSGSSR Unmodified 1513.7372 0.73724996 4673 Q9UJZ1;A0A087WYB4;Q9UJZ1-2 STOML2 Stomatin-like protein 2, mitochondrial yes no 0 0 0 5.67 0.471 1 2 42.967 43.06 2;3 7.8732E-15 10776 20230619_1886_Aki_TMTPro18x_K_F6 232.48 169.26 135650 117880 114330 137520 154260 172010 159850 162300 181880 153290 161120 148890 144250 112070 170140 146070 143640 144290 125320 108070 118680 137710 157300 171100 161480 166190 183130 155300 165530 150150 148890 118670 170970 146220 137690 137070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 355150000 2095 4673 1991 3843;3844;3845 3149;3150;3151 3151 3 9606 Homo sapiens 0.0009308226194661984 APVPSTCSSTFPEELSPPSHQAK Unmodified 2453.1533 0.15328912 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;Q14980-5;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q86XH4;F5H0Z7;F5H763;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 6.33 0.471 2 1 49.676 49.755 3;4 6.0173E-26 13781 20230619_1886_Aki_TMTPro18x_K_F6 135.21 128.33 45475 42804 45237 54502 48346 44101 45767 51047 55267 45589 45092 45411 50208 39795 48712 52349 49717 52429 42087 39265 46058 53941 49842 45571 46610 51533 55353 46365 46977 45938 50995 41915 49636 52397 47578 49787 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114060000 2096 349;3906 1992 3846;3847;3848 3152;3153 3153 2 9606 Homo sapiens -0.015161395293944224 APVPTGEVYFADSFDR Unmodified 1769.8261 0.82606496 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;A0A7P0Z484;A0A7P0TAR9;A0A7P0Z4H2;Q16094;A0A7P0TAN9;A0A7P0T8N1;D6RAU8;D6RAQ8;D6RD16 CANX Calnexin yes no 0 0 0 4.2 0.748 1 2 2 60.95 60.977 2;3 1.0536E-25 18699 20230619_1883_Aki_TMTPro18x_K_F4 224.5 213.58 187680 153710 178570 191510 166930 222340 205390 217570 255210 201920 206340 210040 216160 189580 227550 237070 215870 243890 173470 141040 182120 190710 175730 222260 206410 222130 255050 205260 214520 212250 220890 198730 230610 237820 206850 231470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2942999999.9999995 2097 1700 1993 3849;3850;3851;3852;3853 3154;3155;3156 3155 3 9606 Homo sapiens -0.028055024984041665 APVQPQQSPAAAPGGTDEK Unmodified 1847.9014 0.90135517 3840 Q59EG8;Q13200;B4DM22;Q9NSM5;C9JPC0;F8WBS8 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 4 0 1 41.723 41.766 3 0.00010899 10339 20230619_1883_Aki_TMTPro18x_K_F4 79.676 69.754 20621 13577 15600 21518 18148 24493 20929 19332 30940 24791 28489 32550 34898 31834 23699 39900 47762 49023 19006 12504 16346 21092 18791 24402 21237 20265 30836 25026 29636 32681 34929 33290 25711 40419 45474 46461 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58017000 2098 3840 1994 3854 3157 3157 1 9606 Homo sapiens 0.011320549620222664 APVTLLDAQSLAQSFFNR Unmodified 1977.032 0.031975415 1894 A0M8Q2;Q6IPC0;P49593;Q0VGL7;A8MX49 PPM1F Protein phosphatase 1F yes no 0 0 0 5 0 1 65.901 65.943 3 1.3211E-38 20540 20230619_1885_Aki_TMTPro18x_K_F5 252.82 229.14 6618.4 4643.7 5212.6 6234.1 4370.5 9894.7 9071.1 7959.3 8685 6340.4 8400.4 8086.1 10208 10776 5926.7 9410 10235 14819 6103.6 4266.9 5415.8 6208.6 4772.3 9666.1 8854.7 8222.7 8843.6 6558.7 8704.8 8230 10176 10955 6360.3 9768.7 9782.7 14001 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33270000 2099 1894 1995 3855 3158 3158 1 9606 Homo sapiens 0.08254070680868608 APWNHGEER Unmodified 1094.4894 0.48935553 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 0 2.5 0.5 1 1 31.999 32.068 3 0.0001344 6402 20230619_1882_Aki_TMTPro18x_K_F3 140.11 116.28 92998 87280 63668 64790 77441 84215 83168 95100 88047 72570 84573 94341 85275 72203 66279 61680 88879 89619 85847 79719 67330 67667 79566 84022 83695 95741 89227 75192 87013 93969 86120 74683 68947 63742 84825 84822 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27569000 2100 3610 1996 3856;3857 3159;3160 3160 2 9606 Homo sapiens -0.05410957024514573 APYFSGSSTFSPTILSSDK Unmodified 1990.9524 0.95238769 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 0 0 2 0 1 61.955 61.965 3 5.4509E-05 19498 20230619_1881_Aki_TMTPro18x_K_F2 88.385 78.463 176910 142170 157940 190270 125370 163520 158400 187420 179500 191500 196490 194550 220010 182830 175290 249700 207660 253990 163420 130560 161740 187820 133950 167840 158600 189900 182410 193340 201770 197120 221660 192550 181260 249830 198690 241020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223360000 2101 4170 1997 3858 3161 3161 1 9606 Homo sapiens -0.003450407837590319 AQAAAPASVPAQAPK Unmodified 1376.7412 0.74121312 221 A0A024R326;Q6IPI1;A0A3B3ITT5;P47914 RPL29 60S ribosomal protein L29 yes no 0 0 0 7.67 0.471 1 2 41.506 41.528 3;4 5.4296E-08 10058 20230619_1888_Aki_TMTPro18x_K_F8 140.1 120.32 201860 121590 213290 214520 241210 290810 243130 239290 303730 232390 284220 302980 282480 262780 254660 204390 307540 305700 186430 112190 216180 209830 248640 286860 246890 247840 304940 237570 292550 302810 287230 269320 262060 212210 293720 289290 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4377500000 2102 221 1998 3859;3860;3861 3162;3163;3164;3165 3163 4 9606 Homo sapiens 0.06791216546298529 AQAALAVNISAAR Unmodified 1254.7044 0.70443369 765 Q59ET3;B2R9K8;A0A024RDL1;P40227;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 5.57 1.4 2 2 1 1 1 48.132 48.198 2;3 3.9312E-08 12978 20230619_1885_Aki_TMTPro18x_K_F5 160.18 133.67 324160 287200 293380 304640 312340 323570 345720 318870 357710 380240 385550 405470 416300 345170 365110 423050 418360 410500 299660 263050 300920 306640 323680 325860 347020 327810 365040 381700 395750 408390 421440 362170 375430 423020 399710 390050 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1511599999.9999998 2103 765 1999 3862;3863;3864;3865;3866;3867;3868 3166;3167;3168;3169 3167 4 9606 Homo sapiens 0.08726964720426622 AQADLALEK Unmodified 957.51311 0.51311067 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 3.5 0.5 1 1 47.365 47.407 2;3 0.00085817 12784 20230619_1883_Aki_TMTPro18x_K_F4 94.804 55.782 188200 133520 172180 179610 213390 248160 217450 201620 263610 191240 199780 217580 220090 164780 197600 185630 202760 200940 173760 122680 176930 178420 218690 244590 220330 208930 263220 194790 208990 217800 222770 172920 201540 187120 193930 190700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 464090000 2104 349;3906 2000 3869;3870 3170;3171 3171 2 9606 Homo sapiens 0.032654636892857525 AQAELNALK Unmodified 956.5291 0.52909508 4407 Q99816;F5H442;Q99816-2;D3DQY6 TSG101 Tumor susceptibility gene 101 protein yes no 0 0 0 6 0 2 48.804 48.881 3 0.0058653 13397 20230619_1886_Aki_TMTPro18x_K_F6 70.1 42.328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2105 4407 2001 3871;3872 3172;3173 3172 2 9606 Homo sapiens 0.049091699261907706 AQAELVGTADEATR Unmodified 1430.7001 0.70013617 3529 P30049 ATP5D ATP synthase subunit delta, mitochondrial yes yes 0 0 0 2 0.816 1 1 1 43.807 43.842 3 3.7661E-06 11575 20230619_1881_Aki_TMTPro18x_K_F2 129.38 65.618 80830 68607 79449 84839 93524 103530 100280 93011 124290 102490 115250 103790 106350 92091 101120 102880 128490 109430 74748 62938 81078 84582 96246 103030 101420 96010 124810 103180 118200 104940 108620 95959 104430 103580 122540 103940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118820000 2106 3529 2002 3873;3874;3875 3174;3175;3176 3175 3 9606 Homo sapiens 0.002014107161812717 AQAEQQHNPAANPTMIR Oxidation (M) 1891.8959 0.89589264 1957 A5YKK6;A5YKK6-2;A5YKK6-3;B4DYL7;B3KPW6;H3BMZ2 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 1 0 4.5 0.5 1 1 32.704 32.774 3 0.017144 6640 20230619_1885_Aki_TMTPro18x_K_F5 49.141 38.041 10278 6557.9 10638 10657 12040 12914 12359 11649 14616 10739 15913 12385 13228 12016 11880 14779 15798 13986 9493.6 6042.3 10798 10450 12401 12853 12512 11966 14790 10963 16121 12511 13530 12547 12336 14755 15065 13299 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42592000 2107 1957 2003 3876;3877 3177;3178 3178 1241 2 9606 Homo sapiens -0.014379471014308365 AQAEQQHNPAANPTMIR Unmodified 1875.901 0.90097802 1957 A5YKK6;A5YKK6-2;A5YKK6-3;B4DYL7;B3KPW6;H3BMZ2 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 6 0 1 35.264 35.317 3 2.9733E-18 7739 20230619_1886_Aki_TMTPro18x_K_F6 170.48 143.45 8552.9 6066.3 8073.1 8909.9 8405.1 10585 9985.4 10040 11195 9534.1 11766 10677 11125 10287 8691.9 13320 12790 13350 7898.4 5579.5 8253.6 8782.4 8758.3 10556 10014 10281 11349 9701.6 12006 10788 11269 10780 9133.7 13324 12202 12677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24350000 2108 1957 2003 3878 3179 3179 1 9606 Homo sapiens -0.0019364323879926815 AQAGEFGDR Unmodified 949.42536 0.42535829 4457 Q9BWH6;Q9BWH6-2;H3BRE8;A8K2F9 RPAP1 RNA polymerase II-associated protein 1 yes no 0 0 0 2 0 1 34.601 34.658 2 0.0048281 7531 20230619_1881_Aki_TMTPro18x_K_F2 89.029 57.656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2109 4457 2004 3879 3180 3180 1 9606 Homo sapiens -0.05137737181473767 AQAGEGVRPSPMQLELR Oxidation (M) 1853.9418 0.9417802 2956 F2Z2Y4;V9HWC3;O00764-3;O00764-2;O00764 PDXK;HEL-S-1a Pyridoxal kinase yes no 0 1 1 6 0 1 41.299 41.394 3 0.078952 10077 20230619_1886_Aki_TMTPro18x_K_F6 43.81 21.909 63372 49246 59836 66427 72185 81897 72553 73467 86924 79253 89174 88156 88627 77724 74129 79073 99926 86549 58553 45233 61309 65851 74055 81427 73577 75783 87808 80080 91336 88726 89820 80586 77077 79856 95267 82175 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27878000 2110 2956 2005 3880 3181 3181 1753 1 9606 Homo sapiens 0.04896698080824535 AQAGEGVRPSPMQLELR Unmodified 1837.9469 0.94686558 2956 F2Z2Y4;V9HWC3;O00764-3;O00764-2;O00764 PDXK;HEL-S-1a Pyridoxal kinase yes no 0 0 1 7 0 1 45.324 45.409 3 2.0793E-06 11482 20230619_1887_Aki_TMTPro18x_K_F7 112.67 92.927 67823 55740 66247 65864 62080 76489 67928 68680 87707 72101 70987 76476 89856 77280 78035 87473 84901 91275 62703 51117 67368 65837 65069 76348 68771 70795 87548 72873 74482 77474 90566 80233 79990 87927 81211 86630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81061000 2111 2956 2005 3881 3182 3182 1 9606 Homo sapiens 0.061410019434561036 AQALEDLAGFK Unmodified 1161.603 0.60298831 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 6.5 0.5 1 1 61.766 61.813 3 0.001258 18604 20230619_1887_Aki_TMTPro18x_K_F7 88.338 62.901 199390 164820 189550 196110 121850 159920 162720 164800 198390 221290 207840 177800 246240 192490 172900 236240 192110 190880 184310 151160 192390 195060 133300 164560 162950 169580 200620 219300 214180 183100 246470 200450 178520 234000 183610 181790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 229240000 2112 3588 2006 3882;3883 3183;3184 3184 2 9606 Homo sapiens 0.028650932978280252 AQALQEECGYLR Unmodified 1436.6718 0.67181293 3438 P12036-2;P12036 NEFH Neurofilament heavy polypeptide yes no 0 0 0 4 0 1 47.012 47.054 2 1.3081E-05 12655 20230619_1883_Aki_TMTPro18x_K_F4 168.05 132.09 68233 55344 63310 50000 28998 37092 39529 36027 48369 91671 96591 105110 119330 96886 81474 128350 121970 140000 63052 50642 64109 50851 33191 38523 39621 38404 50867 90011 97835 105820 119260 101910 86013 128960 116430 132790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46260000 2113 3438 2007 3884 3185 3185 1 9606 Homo sapiens -0.02905610464745223 AQALVQYLEEPLTQVAAS Unmodified 1930.0048 0.004757612 4709 Q9Y2Q5 LAMTOR2 Ragulator complex protein LAMTOR2 yes yes 0 0 0 6 0.816 1 1 1 67.241 67.276 3 0.00013991 21000 20230619_1887_Aki_TMTPro18x_K_F7 84.508 78.21 13504 9167.8 10674 12544 10584 12791 12511 14166 18013 14491 13908 11749 11702 11845 15350 16506 14286 13656 12452 8426.9 11090 12392 11079 12941 12673 14379 17863 14552 14357 12070 12202 12452 15493 16350 13675 13003 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 216160000 2114 4709 2008 3885;3886;3887 3186;3187 3187 2 9606 Homo sapiens 0.07695542349847528 AQASSIPVGSR Unmodified 1071.5673 0.5672715 1550 A0A494C0X0;Q99426-2;Q99426;K7EP07;K7EK42 TBCB Tubulin-folding cofactor B yes no 0 0 0 7.5 0.5 1 1 36.03 36.058 2 2.5347E-06 7900 20230619_1888_Aki_TMTPro18x_K_F8 164.31 117.11 200780 121830 215580 230170 252430 282610 245940 253900 282970 231490 319840 335820 280600 274940 288410 164460 339760 331500 185470 112520 218420 224010 259130 280920 249580 260790 287340 238410 324840 333820 288250 279800 295250 176840 324530 313120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 247210000 2115 1550 2009 3888;3889 3188;3189 3189 2 9606 Homo sapiens 0.034350558408505094 AQAVLEEDHYGMEDVK Unmodified 1832.8251 0.82507869 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0;K7ER27;A4VCH6 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 2.5 0.5 1 1 50.784 50.845 3 1.297E-14 14820 20230619_1881_Aki_TMTPro18x_K_F2 175.51 171.16 47867 42923 46264 48754 41498 49225 54426 49584 52888 70944 67579 69542 72672 64121 63232 74426 64063 66687 44275 39336 47083 48780 43840 49758 54089 51214 54633 70479 68882 70456 73561 66845 64575 74170 61305 63412 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217290000 2116 2417 2010 3890;3891 3190 3190 1 9606 Homo sapiens -0.05802084929632656 AQAVSEDAGGNEGR Unmodified 1359.6015 0.60148476 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q86UM1;C9JZG1 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 1 0 1 32.312 32.312 2 5.7127E-57 6891 20230619_1880_Aki_TMTPro18x_K_F1 318.47 298.26 35175 17441 43699 42054 62363 73430 45370 65001 53021 42363 66399 75815 55666 57781 65704 23818 69611 68532 32510 16194 43953 40808 62871 71596 47039 66306 54059 45040 67110 74745 57690 58398 66611 27132 66558 64622 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37683000 2117 487 2011 3892 3191 3191 1 9606 Homo sapiens -0.06393192528867075 AQAVSEEEEEEEGK Unmodified 1562.6584 0.65839051 3008 G3V529;Q9GZR7;B4DKV2;Q9GZR7-2;Q59FS7;B4DGI6;Q9P054 DDX24 ATP-dependent RNA helicase DDX24 yes no 0 0 0 1 0 1 41.792 41.792 3 1.7034E-07 10876 20230619_1880_Aki_TMTPro18x_K_F1 142.45 135.21 106460 69367 102650 128170 176620 194920 150920 166490 163400 148270 174030 191710 164440 164410 168300 126730 188130 184350 98288 64022 105880 125310 176920 191250 154040 171480 166160 152170 177790 191570 168490 168450 171920 131350 179780 174500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144720000 2118 3008 2012 3893 3192 3192 1 9606 Homo sapiens -0.10043234553654656 AQCGGGLLGVR Unmodified 1086.5604 0.56041199 628 E9PF17;A0A024RAP3;A0A024RAL1;A0A024RAQ9;Q59FG9;P13611-4;P13611-3;P13611-2;P13611-5;P13611;Q86W61;D6RGZ6 VCAN;CSPG2 Versican core protein yes no 0 0 0 2 0 1 43.697 43.779 2 0.013518 11553 20230619_1881_Aki_TMTPro18x_K_F2 72.042 44.738 148870 106390 115980 109180 152070 205720 153840 135170 172630 168440 197810 210730 188830 153600 205740 163910 201630 177900 137300 97496 121120 111300 155550 199020 155540 143840 175780 169790 201520 209940 193740 160890 208440 165490 192800 168910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187530000 2119 628 2013 3894 3193 3193 1 9606 Homo sapiens 0.020594196886122518 AQCPIVER Unmodified 971.48585 0.48585006 300 M0R0F0;A0A024R4Q8;M0R0R2;P46782;Q53G25;Q59EK8 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 0 0 0 4 1.41 1 1 1 1 1 35.518 35.583 2 0.0065233 7782 20230619_1882_Aki_TMTPro18x_K_F3 110.31 81.161 452470 304750 384860 382810 451130 473220 465710 486480 549490 481940 360510 393180 554940 433270 324300 483330 619270 508620 417400 279870 397540 381460 463810 471980 471210 495690 547900 484810 387280 404430 549410 448620 350880 485830 588900 483230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2852900000 2120 300 2014 3895;3896;3897;3898;3899 3194;3195;3196;3197;3198 3195 5 9606 Homo sapiens -0.0010334312273698743 AQDAPLSLLQTQGGR Unmodified 1553.8162 0.81616898 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 7.5 0.5 1 1 54.122 54.191 2 1.5098E-13 15313 20230619_1888_Aki_TMTPro18x_K_F8 222.73 179.44 92340 65120 90015 95338 79367 106940 121810 115100 134400 149030 133940 125680 168410 114330 121520 171290 140170 150520 85293 59894 91561 93933 84566 107350 120710 117910 136290 148060 138860 128330 168360 121450 125700 169890 134000 143140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 130030000 2121 2830 2015 3900;3901 3199 3199 1 9606 Homo sapiens 0.0614135428688769 AQDIEAGDGTTSVVIIAGSLLDSCTK Unmodified 2620.2902 0.29017653 3622 P50991;P50991-2;B7Z9L0;B7Z2Z8 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 7.33 0.471 2 1 64.947 64.972 3;4 2.6596E-20 19938 20230619_1888_Aki_TMTPro18x_K_F8 151.91 139.47 33230 25433 28192 30508 32027 32262 36078 34133 35179 34755 35569 37413 38557 32061 36013 43226 39923 40450 30676 23334 29128 30423 33049 32544 36109 34763 35914 35165 36626 37691 39135 33836 36922 43081 38164 38447 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 367390000 2122 3622 2016 3902;3903;3904 3200;3201 3201 2 9606 Homo sapiens 0.04484304839616016 AQDIQCGLQSR Unmodified 1274.6037 0.60373336 2875 E5RFP0;Q8WVJ2 NUDCD2 NudC domain-containing protein 2 yes no 0 0 0 5.5 0.5 1 1 40.102 40.193 2 3.7438E-09 9599 20230619_1885_Aki_TMTPro18x_K_F5 190.26 159.19 136260 106230 120080 117870 138020 145710 142050 140920 164980 140800 161750 151610 165060 143780 135570 186840 210290 179540 125840 97384 123580 118500 142060 145160 143700 144270 166570 142690 166150 153310 167070 150820 142770 186490 200270 170710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162650000 2123 2875 2017 3905;3906 3202;3203 3202 2 9606 Homo sapiens -0.02258435324756647 AQDLHLFETLK Unmodified 1313.698 0.69795133 1914 A2RRP1-2;A2RRP1;A0A8V8TPL8;H0Y5G7;A0A8V8TQX6;A0A8V8TPS6 NBAS Neuroblastoma-amplified sequence yes no 0 0 0 7 0 1 56.948 57.003 3 5.9544E-05 16627 20230619_1887_Aki_TMTPro18x_K_F7 128.31 89.679 165160 134320 152440 161770 160950 177900 170140 181200 204460 179170 179540 192560 179650 169190 197960 199150 180690 226240 152620 123210 156090 161360 166830 178750 172110 184800 205320 181620 185540 194070 184320 176850 200050 201160 173360 214430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52682000 2124 1914 2018 3907 3204;3205 3205 2 9606 Homo sapiens 0.05365026769027281 AQDPSEVLTMLTNETGFEISSSDATVK Unmodified 2869.3539 0.353899 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 6.2 0.748 1 2 2 65.619 65.655 3;4 2.4355E-61 20417 20230619_1885_Aki_TMTPro18x_K_F5 258.05 247.14 132090 104440 121310 126170 112910 113740 135520 120570 122310 136810 159360 144460 159570 129940 142000 159210 151490 165810 122030 95816 124020 125500 118420 116170 134960 123220 126850 137580 161670 145910 161950 136100 145330 159840 144950 157360 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 479000000 2125 2621 2019 3908;3909;3910;3911;3912 3206;3207;3208;3209 3206 4 9606 Homo sapiens -0.006003795139804424 AQDVLVQEMEVVK Unmodified 1486.7701 0.77012999 2446 Q99459;B3KY60;B4DSH1 CDC5L Cell division cycle 5-like protein yes no 0 0 0 3 0 1 61.832 61.862 3 0.036014 19170 20230619_1882_Aki_TMTPro18x_K_F3 47.774 19.141 50693 49301 55619 96447 81645 99885 93865 101490 128640 36262 31497 28411 32771 29782 37461 35736 28794 35489 46967 45471 56768 93417 83184 100650 94890 101840 124900 40077 36936 29319 33684 30992 37526 35809 27680 33686 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88600000 2126 2446 2020 3913 3210 3210 1 9606 Homo sapiens 0.04621573060398987 AQDWEENASR Unmodified 1204.5109 0.51087884 4594 Q9NU22;Q6AI22 MDN1;DKFZp686H16106 Midasin yes no 0 0 0 1 0 1 38.68 38.68 2 5.2573E-05 9519 20230619_1880_Aki_TMTPro18x_K_F1 145.46 132.34 26711 18471 24939 23350 28554 26392 23480 25729 30640 34396 34297 33883 38593 31062 29618 34037 51319 32946 24662 16962 25513 23227 29214 26457 24209 26551 30990 34278 35190 34317 38837 32300 31487 34088 48765 31371 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35422000 2127 4594 2021 3914 3211 3211 1 9606 Homo sapiens -0.08319616786502593 AQEACGPLEMDSALSVVQNLEK Unmodified 2388.1301 0.13011083 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 5 0 1 63.863 63.909 3 1.0902E-30 19710 20230619_1885_Aki_TMTPro18x_K_F5 203.64 188.05 53609 37052 50332 52875 44091 54444 50462 55922 50172 59961 57149 56663 66206 60430 65036 76988 66102 70896 49498 34072 51326 52110 46507 54938 50546 57121 51470 60264 58720 57844 67254 63065 66281 76724 63268 67385 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191340000 2128 1292 2022 3915 3212 3212 1 9606 Homo sapiens -0.008429016383615817 AQEAPGQAEPPAAAEVQGAGNENEPR Unmodified 2587.1899 0.18988563 2231 B2R6A3;O14745;B3KSV9;J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF;Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 0 0 0 1.5 0.5 1 1 42.291 42.331 3 6.5119E-29 11096 20230619_1880_Aki_TMTPro18x_K_F1 184.47 176.48 21740 18790 19799 25670 27408 31457 32174 30215 36981 30008 32596 32398 36976 28462 21867 38320 32032 33494 20095 17254 20435 25420 28010 31330 32288 30949 37207 30426 33819 32670 36870 30014 23155 38029 30560 31859 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 170620000 2129 2231 2023 3916;3917 3213;3214;3215 3213 3 9606 Homo sapiens -0.0402217137907428 AQECFQER Unmodified 1066.4502 0.45019284 1834 Q53RS1;A0A8V8TPV7;A0A8V8TNK7;A0A8V8TN27;B2RNB2;P78536-2;P78536 ADAM17 Disintegrin and metalloproteinase domain-containing protein 17 yes no 0 0 0 2 0 1 34.269 34.325 2 0.0096905 7401 20230619_1881_Aki_TMTPro18x_K_F2 100.98 81.89 23540 12142 22606 21960 27090 32557 26896 31998 31286 22132 30125 30748 36475 26236 26651 20075 40574 31901 21709 11217 23110 21498 27806 32072 27278 32440 31545 23168 31235 30666 36537 26922 27997 20959 38626 30206 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14940000 2130 1834 2024 3918 3216 3216 1 9606 Homo sapiens -0.08037425370412166 AQEEAERLEADR Unmodified 1415.6641 0.66408501 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437 EZR;HEL-S-105 Ezrin yes no 0 0 1 1 0 1 38.093 38.093 3 1.0589E-09 9219 20230619_1880_Aki_TMTPro18x_K_F1 170 133.16 107620 98177 105300 108330 156500 124500 142510 136140 129730 130300 136330 99062 133120 91939 136580 111360 109080 67455 99563 89945 107910 108840 157680 125090 144080 138090 133210 131010 139210 101860 135930 96154 137150 109260 104350 64687 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1052599999.9999999 2131 3456 2025 3919 3217 3217 1 9606 Homo sapiens -0.027120464606923633 AQEIAMQNR Oxidation (M) 1075.508 0.50804206 1223 Q9HCC0;Q9HCC0-2;A0A804HLJ9;A0A140VK29;A0A804HKE8;A0A804HJ24;A0A804HK37;A0A804HJ84;A0A804HJ31;A0A804HL02;A0A804HHS4;D6RDF7;A0A0S2Z5R4;A0A804HIH3;A0A804HJW5;D6R9R1;A0A0D9SFE9;A0A804HJW2;B3KR24;A0A0G2JM88 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes no 0 1 0 3.5 0.5 1 1 32.302 32.372 2 0.035077 6467 20230619_1883_Aki_TMTPro18x_K_F4 67.897 43.003 18724 8655.5 16638 20742 29292 26139 24596 23532 28458 15367 23451 19857 18247 16582 19304 11223 25374 19252 17251 8039.3 17285 19993 29257 25952 25175 24007 28520 16130 24046 19851 18853 16935 19897 11843 24176 18223 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16310000 2132 1223 2026 3920;3921 3218 3218 759 1 9606 Homo sapiens -0.026691634449889534 AQELGHSQSALASAQR Unmodified 1652.823 0.82304527 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;H0YFY6;Q96HN5;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 6.5 1.12 1 1 1 1 35.571 35.622 3 5.8696E-53 7827 20230619_1886_Aki_TMTPro18x_K_F6 307.11 287.35 58997 45213 62715 66483 72684 82039 68705 69947 69822 67566 70889 75691 72023 62672 67089 63627 75757 76593 54559 41573 63572 65561 74595 81468 69562 72228 71131 68661 72772 75994 73250 65139 68764 64669 72406 72608 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 309360000 2133 349;3906 2027 3922;3923;3924;3925 3219;3220;3221;3222 3220 4 9606 Homo sapiens 0.02274667167489497 AQENLNPLVVLNLFK Unmodified 1710.9669 0.96685596 1838 A0A8V8TNL6;A0A8V8TNX3;B7Z6H4;O14802;A0A8V8TM36;A0A8V8TM70 POLR3A DNA-directed RNA polymerase;DNA-directed RNA polymerase III subunit RPC1 yes no 0 0 0 4.5 0.5 1 1 66.415 66.443 3 0.085306 20999 20230619_1883_Aki_TMTPro18x_K_F4 36.638 24.412 4258.9 2365.7 2685.4 2899.1 3363.5 3511.3 3474.6 3632.8 4320.3 2315.3 4157 4886.4 4658.7 2830.1 3332.3 3944.1 3808.2 3845.8 3918.2 2174.2 2869.9 2892.6 3447 3507 3522.6 3668.3 4337.3 2490.2 4297.7 4775.5 4667.8 3048.2 3441.4 3938.4 3639.3 3653.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5030900 2134 1838 2028 3926;3927 3223 3223 1 9606 Homo sapiens 0.13981120945686598 AQEPESGLSEETQVK Unmodified 1630.7686 0.76860967 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 1.5 0.5 1 1 44.657 44.698 3 3.1414000000000005E-25 12147 20230619_1880_Aki_TMTPro18x_K_F1 192.78 176.84 363660 280080 339330 353700 370770 410460 402040 353340 433890 446230 467720 416090 478130 355040 398660 438020 454960 370520 335960 257090 347310 351850 383520 409460 404480 367520 441690 445120 478320 421810 483510 372790 410070 435010 434180 352950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 708010000 2135 3758 2029 3928;3929 3224;3225;3226 3224 3 9606 Homo sapiens -0.021543894946034925 AQEPSAAIPK Unmodified 1010.5397 0.53965977 146 A0A024R1K8;Q15459 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 5.5 0.5 1 1 42.501 42.59 2 1.946E-05 10573 20230619_1885_Aki_TMTPro18x_K_F5 160.75 146.76 92264 69498 80831 94310 104740 118540 112020 101310 136600 111120 127010 130960 134320 111150 109950 123400 156400 133700 85184 63848 83522 93472 107180 117610 113220 104990 137300 112450 131090 131370 135730 115970 114860 124350 149040 126960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99685000 2136 146 2030 3930;3931 3227;3228 3227 2 9606 Homo sapiens 0.03481152580604885 AQEQQQQMAELHSK Oxidation (M) 1670.7682 0.76823251 1989 Q9P2E9;A7BI36;Q9P2E9-3;A1A5C5;A1A5C4;F8W7S5 RRBP1 Ribosome-binding protein 1 yes no 0 1 0 3.5 0.5 1 1 33.494 33.554 3 4.0783E-05 6969 20230619_1882_Aki_TMTPro18x_K_F3 98.439 86.671 17532 13065 17063 13262 21105 23283 21719 20831 23281 21926 25961 28934 21831 19941 25192 25662 29255 27319 16198 11970 17413 13523 21618 22731 21910 21471 23726 22310 26357 28743 22586 21158 25784 25788 27938 25937 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15146000 2137 1989 2031 3932;3933 3229;3230 3229 1253 2 9606 Homo sapiens -0.04032087695463815 AQEQQQQMAELHSK Unmodified 1654.7733 0.77331789 1989 Q9P2E9;A7BI36;Q9P2E9-3;A1A5C5;A1A5C4;F8W7S5 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 4 0 1 38.229 38.271 3 3.3631999999999998E-22 8839 20230619_1883_Aki_TMTPro18x_K_F4 226.88 190.25 46081 36574 41552 34470 44435 55539 49731 49908 58615 56734 62906 73920 64548 57189 62687 73302 81309 74801 42567 33480 42599 35302 46141 54435 50114 51534 59376 57494 64492 73678 65777 60371 64859 73455 77571 71054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80263000 2138 1989 2031 3934 3231 3231 1 9606 Homo sapiens -0.02787783832832247 AQETEAAPSQAPADEPEPESAAAQSQENQDTRPK Unmodified 3577.6041 0.60407012 599 Q9UNF1;A0A024R9Y7;Q5H907;Q5H909;Q9UNF1-2;B4DX55;B4DNG7 MAGED2 Melanoma-associated antigen D2 yes no 0 0 1 1 0 1 40.638 40.638 4 5.2733E-22 10403 20230619_1880_Aki_TMTPro18x_K_F1 148.02 144.14 4631.8 3471.9 4871.7 3748.9 3817 6230 4668.7 3715.7 3771.7 4317.8 6456.7 6904.2 5912.7 4775.9 4693.5 5993.2 7711.3 7610.7 4282.5 3182.4 4908.7 3797.2 4083.5 6049.6 4633.4 3989 3997.7 4409.8 6476.2 6820.2 5994.1 5062.5 4967.7 6088.8 7348.3 7211.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38796000 2139 599 2032 3935 3232 3232 1 9606 Homo sapiens -0.08162775445453008 AQFAEATQR Unmodified 1020.4989 0.49885759 3335 O94874;O94874-3 UFL1 E3 UFM1-protein ligase 1 yes no 0 0 0 4.5 0.5 1 1 37.033 37.102 2 0.00012159 8326 20230619_1885_Aki_TMTPro18x_K_F5 152.11 109.2 60067 47487 61153 59623 76260 78990 75904 77106 101940 64596 74763 84169 74731 63444 76027 63935 99392 84948 55539 43581 62249 59480 78003 78364 77327 78553 101160 66611 78056 83813 76377 66173 78496 65460 94772 80514 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 66800000 2140 3335 2033 3936;3937 3233;3234 3234 2 9606 Homo sapiens -0.010571887390142365 AQFAQPEILIGTIPGAGGTQR Unmodified 2124.1328 0.13275209 1410 A0A384MDW7;P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes no 0 0 0 2.5 0.5 1 1 62.118 62.138 3 7.7855E-23 19526 20230619_1881_Aki_TMTPro18x_K_F2 183.06 158.28 242250 217760 249710 284650 243380 247870 283620 286600 265190 289070 316960 239710 244990 209980 342460 235010 227160 235890 224190 199840 253150 281480 254070 254370 283190 290210 273280 290360 319310 244770 256780 218960 339570 236190 218520 224010 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 509040000 2141 1410 2034 3938;3939 3235;3236;3237;3238 3235 4 9606 Homo sapiens 0.1156510266373516 AQFEDRN Unmodified 878.38824 0.38824451 4479 Q9C005 DPY30 Protein dpy-30 homolog yes yes 0 0 1 2 0 1 32.593 32.653 2 0.039792 6784 20230619_1881_Aki_TMTPro18x_K_F2 100.45 53.384 23170 10151 26428 28187 37161 34770 27420 34041 30048 21149 35494 40081 28047 27110 34632 17575 39692 35763 21387 9460.5 26736 27033 37433 34617 28322 34471 30635 22638 35878 39362 29197 27885 35280 18892 37901 33790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28884000 2142 4479 2035 3940 3239 3239 1 9606 Homo sapiens -0.05581408727243797 AQFEGIVTDLIR Unmodified 1360.7351 0.73506511 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 6.75 0.829 2 1 1 63.362 63.396 2 1.4793E-12 19361 20230619_1887_Aki_TMTPro18x_K_F7 231.05 188.45 1585900 1332000 1602500 1769300 1493100 1702200 1783100 1760900 1946400 1833000 1765900 1895500 1843100 1526700 1989000 2134100 1867600 2067900 1466800 1222900 1626000 1749800 1567700 1727400 1786300 1797300 1966500 1850300 1825300 1909000 1885300 1619200 2014200 2130600 1789500 1964100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2898200000 2143 1488 2036 3941;3942;3943;3944 3240;3241;3242 3241 3 9606 Homo sapiens 0.06912698314795307 AQFEQLK Unmodified 862.45487 0.45486751 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0 PLEC;PLEC1 Plectin yes no 0 0 0 6 0 1 47.333 47.414 2 0.036756 12762 20230619_1886_Aki_TMTPro18x_K_F6 87.181 26.704 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2144 3921 2037 3945 3243 3243 1 9606 Homo sapiens 0.01813826834666088 AQFFVEDASTASALK Unmodified 1583.7831 0.78313752 4657 Q9UBU9;E9PIN3;Q59E96;Q9UBU9-2;B4E227;E9PLA7 NXF1 Nuclear RNA export factor 1 yes no 0 0 0 6.5 0.5 1 1 60.629 60.679 3 2.5265E-08 18410 20230619_1886_Aki_TMTPro18x_K_F6 141.82 129.84 99490 84314 92689 106710 92465 109260 104150 110410 116140 119750 114190 110030 126960 95097 106750 131770 127070 122800 91964 77366 94812 105950 96454 110290 104740 112950 117620 120200 117770 111680 128140 100590 110160 131240 121350 116750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 275980000 2145 4657 2038 3946;3947 3244;3245 3244 2 9606 Homo sapiens 0.014597274442166963 AQFLVEK Unmodified 833.4647 0.46470391 4405 Q99623;F5GY37;F5GWA7;F5H3X6 PHB2 Prohibitin-2 yes no 0 0 0 7.5 0.5 1 1 51.312 51.389 2 0.0071349 14118 20230619_1888_Aki_TMTPro18x_K_F8 133.12 72.328 2762800 2329500 2341600 2697700 3196700 3423300 3374800 3327700 3922600 3233700 3569300 3505600 3761100 3126700 3460300 3603100 3565700 3490000 2551900 2135700 2429100 2703800 3258200 3404800 3407800 3403100 3949100 3282800 3686800 3534700 3817700 3262900 3530500 3606800 3410100 3316300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1782799999.9999998 2146 4405 2039 3948;3949 3246;3247 3247 2 9606 Homo sapiens 0.041310148400384605 AQGETEVLK Unmodified 973.50803 0.50802529 3357 Q5J7U2;O95478;A0A0A0MQZ6;H0YAI9 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog yes no 0 0 0 3 0 1 42.172 42.234 2 0.0056345 10611 20230619_1882_Aki_TMTPro18x_K_F3 101.11 38.585 16056 12417 16988 16631 23480 25336 17970 18490 24661 17087 25265 25468 23049 19344 24054 17369 32574 27651 14849 11404 17272 16556 23733 24800 18648 19323 24736 17618 25799 25262 23649 20063 24871 18083 31050 26173 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54987000 2147 3357 2040 3950 3248 3248 1 9606 Homo sapiens 0.020211598266769215 AQGPAASAEEPKPVEAPAANSDQTVTVKE Unmodified 2891.4149 0.41485977 3759 P80723;P80723-2 BASP1 Brain acid soluble protein 1 yes no 0 0 2 3.5 0.5 1 1 46.665 46.725 4 1.2023E-20 12450 20230619_1883_Aki_TMTPro18x_K_F4 153.41 142.72 206350 180650 213470 174360 136660 147590 108540 109900 123090 189170 212190 231140 208490 185770 213630 204040 236150 233080 190950 165340 214750 176450 147280 150610 111890 117140 128400 188110 213510 231060 213180 194060 218330 206420 225710 221080 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1257700000 2148 3759 2041 3951;3952 3249;3250;3251;3252 3252 4 9606 Homo sapiens 0.04480893580512202 AQGPAGEVYCPSGDK Unmodified 1534.6722 0.67220686 2305 B2RCD8;Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 yes no 0 0 0 4 0 1 43.728 43.773 3 0.00047195 11243 20230619_1883_Aki_TMTPro18x_K_F4 86.497 82.529 73884 62303 83512 75492 85496 90448 91390 93077 96834 84975 99096 82948 85452 69744 105300 65131 81895 76740 68405 57145 84014 75391 88738 90396 92003 94663 98370 86253 100910 83870 88529 72174 105210 66319 78548 72784 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20516000 2149 2305 2042 3953 3253;3254 3254 2 9606 Homo sapiens -0.0737423553557619 AQGPQQQPGSEGPSYAK Unmodified 1728.8067 0.80672651 100 Q0VAB1;A0A024R0M6;Q3ZCQ8;Q3ZCQ8-2;M0R1Y4;M0R003;M0QXC3;M0R2Z3;M0R303;M0R2D2;M0R047 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes no 0 0 0 5.5 0.5 1 1 39.539 39.628 3 4.0287E-06 9361 20230619_1885_Aki_TMTPro18x_K_F5 98.507 90.123 12605 9051.1 10466 15337 17972 23130 16756 16052 22658 21721 24623 27721 26514 30697 23567 26338 37022 41947 11631 8339.6 10959 15048 18083 22616 17137 17039 22827 21853 25272 27959 26933 31323 24774 27400 35327 39658 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132820000 2150 100 2043 3954;3955 3255 3255 1 9606 Homo sapiens -0.028524587892661657 AQGQESDSSETSVR Unmodified 1479.6437 0.6437435 1719;1783 A0A7R6KYT5;E9PR05;A0A3B3ITZ1;A0A3B3ISN4;H7C5V8;H7C5W4;A0A8I5KTQ4;Q9HB80;Q86YN8;Q86YP0;A0A8I5KXR3;Q03164-2;Q03164;Q03164-3 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 no no 0 0 0 1 0 1 29.163 29.163 2 0.033058 5678 20230619_1880_Aki_TMTPro18x_K_F1 66.262 60.03 3091.6 1863.5 3229.5 3430.2 4063.2 4907.7 1732.2 4584 3628.6 3670.3 3946.2 4370.6 3950.9 3992.6 3387.1 1664.5 5642.4 3445.8 2855.1 1720.5 3281.1 3351.9 4100.2 4838.4 1950.8 4671.2 3605.7 3778.4 4035.2 4385.2 4011.7 4007.5 3567.5 1817.1 5361.6 3262.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2955300 2151 1719;1783 2044 3956 3256 3256 1 9606 Homo sapiens -0.07689261911150425 AQGWQGLK Unmodified 886.4661 0.4661009 2866 Q6FGM6;E5KN59;E5KN55;Q08752;H0Y8J0 PPID Peptidyl-prolyl cis-trans isomerase D yes no 0 0 0 2 0 1 48.121 48.192 2 0.0024133 13610 20230619_1881_Aki_TMTPro18x_K_F2 127.12 65.281 122210 110430 124860 104400 142080 171520 146390 128060 174910 82882 96931 70836 82236 66472 121330 76368 86014 66942 113100 101040 126780 106900 146470 167360 148130 132620 173130 86053 102390 72446 86231 69250 120490 76215 82507 63752 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56647000 2152 2866 2045 3957 3257 3257 1 9606 Homo sapiens 0.01832648928814251 AQGYSGLSVK Unmodified 1008.524 0.52400971 589 CON__Q28194;A0A024R9Q1;P07996-2;P07996 THBS1 Thrombospondin-1 yes no 0 0 0 1 0 1 45.777 45.777 2 0.002097 12608 20230619_1880_Aki_TMTPro18x_K_F1 102.52 45.243 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2153 589 2046 3958 3258 3258 1 9606 Homo sapiens 0.02008866063579262 AQHDDQQPVVLR Unmodified 1404.711 0.71097563 2009 Q96G49;B3KMD0;G5E9Y3;A8K1Y7;Q8WWN8-2;Q8WWN8 ARAP3 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 yes no 0 0 0 3 0 1 33.681 33.747 3 2.1667E-51 7070 20230619_1882_Aki_TMTPro18x_K_F3 270.02 244.68 27512 10451 23184 23997 17200 18365 25609 25516 32023 25260 37454 32986 35729 32595 29441 36472 37335 40041 25321 9712.8 23826 23034 18579 19139 25540 25578 32420 25788 38055 33166 36239 33831 30524 36767 35665 37983 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44172000 2154 2009 2047 3959 3259 3259 1 9606 Homo sapiens 0.02480857881096199 AQHEDQVEQYK Unmodified 1373.6212 0.62115757 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 2 0.816 1 1 1 36.273 36.311 3 1.5709E-06 8086 20230619_1882_Aki_TMTPro18x_K_F3 157.47 149.69 144710 52600 119150 153850 202820 220400 203840 219470 358980 195890 238170 305150 304620 281870 189040 253140 400630 441280 133150 49151 124670 147670 204410 217550 210020 223560 351570 202950 253200 303850 303760 290150 206270 265120 381550 416990 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 485500000 2155 1428 2048 3960;3961;3962 3260;3261;3262 3262 3 9606 Homo sapiens -0.05070816518104948 AQHEDQVEQYKK Unmodified 1501.7161 0.71612058 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 1 4 0.816 1 1 1 36.173 36.237 4 0.00012413 7952 20230619_1885_Aki_TMTPro18x_K_F5 112.44 100.05 233910 82558 227070 283530 454140 366800 379540 406790 517390 328790 425190 411300 393560 310960 342420 241740 376260 322500 215470 77476 234890 270460 450900 365370 390990 410540 514940 339230 438990 410230 400080 320580 350360 248980 359300 305660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2201000000 2156 1428 2049 3963;3964;3965 3263;3264 3264 2 9606 Homo sapiens -0.014668830469418026 AQHPDYSFGELSR Unmodified 1505.6899 0.68990583 2903 E7EVG2;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-9;Q86U86-2;Q86U86-8;Q86U86;Q9NVM2;Q5EBM5;Q86U86-3 PBRM1;PB1 Protein polybromo-1 yes no 0 0 0 4.5 0.5 1 1 43.077 43.139 3 0.00087186 10836 20230619_1885_Aki_TMTPro18x_K_F5 87.083 79.359 58024 44707 61715 62574 80867 70311 86054 68758 72173 52248 55512 51379 51002 42180 64070 54846 56239 49538 53661 41083 62672 61817 82399 70508 85974 69962 73593 53689 57566 51925 52810 44481 64435 54649 53838 47132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47538000 2157 2903 2050 3966;3967 3265 3265 1 9606 Homo sapiens -0.04271152218393581 AQHPNIVTVR Unmodified 1133.6305 0.63054046 1016 A0A0D9SEN2;P21127-3;A0A0D9SER5;A0A0D9SEI3;B4E3D9;P21127-2;P21127-8;P21127;Q9UQ88-3;Q9UQ88-4;Q9UQ88-2;P21127-9;P21127-6;Q5QPR3;Q9UQ88;Q5QPR4;P21127-12;A4VCI5;Q6P5Y5;P21127-4;P21127-10;P21127-5;Q96CA8;Q4VBY6;B4E0M9;B4E0N4;Q9UQ88-5;Q9UQ88-10;Q9UQ88-9 CDK11B;CDK11A;CDC2L1;CDC2L2 Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A yes no 0 0 0 1 0 1 33.138 33.138 3 2.2327E-07 7214 20230619_1880_Aki_TMTPro18x_K_F1 159.83 104.39 54178 29095 43128 54886 56227 57528 61569 58112 68237 61435 69898 59236 66424 52358 55810 63359 70209 62711 49904 26888 45000 53287 57502 57953 61950 59427 69174 61855 71399 60047 67380 54840 57771 63438 66985 59597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122430000 2158 1016 2051 3968 3266 3266 1 9606 Homo sapiens 0.06907041348745224 AQHQDPGLGGTQEGAR Unmodified 1620.7604 0.76044502 2000 A8K0R1;P25686;B4DJY6 DNAJB2 DnaJ homolog subfamily B member 2 yes no 0 0 0 2 0 1 29.121 29.193 3 7.9386E-06 5431 20230619_1881_Aki_TMTPro18x_K_F2 106.82 91.281 8908.3 4668.5 9940.7 11604 14991 17192 14950 17993 19017 11867 17000 16781 13743 14390 15623 12385 17983 17447 8226.6 4335.9 10102 11207 15177 16958 15201 18148 19028 12480 17396 16736 14241 14808 15965 12773 17179 16519 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11376000 2159 2000 2052 3969 3267;3268 3267 2 9606 Homo sapiens -0.02510478900740054 AQIEDTLR Unmodified 944.49271 0.49270958 465 Q96CT7;A0A024R7M8;M0R2F5 CCDC124;LOC115098 Coiled-coil domain-containing protein 124 yes no 0 0 0 2.5 0.5 1 1 42.146 42.217 2 0.038059 10586 20230619_1882_Aki_TMTPro18x_K_F3 72.879 59.92 82381 58636 82627 89453 87512 98916 76782 82832 106140 116380 144810 137720 128200 104510 103700 132150 147890 145700 76115 53955 84015 87873 90301 98906 79026 86633 108020 116450 145910 137740 130200 110380 108480 133020 141060 138250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117490000 2160 465 2053 3970;3971 3269 3269 1 9606 Homo sapiens 0.01824293029483215 AQIEDTLRR Unmodified 1100.5938 0.5938206 465 Q96CT7;A0A024R7M8;M0R2F5 CCDC124;LOC115098 Coiled-coil domain-containing protein 124 yes no 0 0 1 5.67 0.471 1 2 37.62 37.702 3 2.4387E-06 8578 20230619_1885_Aki_TMTPro18x_K_F5 178.94 139.9 207890 168560 195400 195510 204130 219260 215800 199840 271110 245750 254090 228800 265810 223540 218350 286780 281600 236420 192130 154570 199650 195590 211720 219540 218590 206750 272350 245510 261770 233040 268720 234050 226720 284170 268510 225250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 357660000 2161 465 2054 3972;3973;3974 3270;3271 3270 2 9606 Homo sapiens 0.047547447321903746 AQIHDLVLVGGSTR Unmodified 1464.8049 0.80487601 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 3.67 3.09 1 1 1 47.374 47.419 3 8.9986E-23 13277 20230619_1880_Aki_TMTPro18x_K_F1 238.65 184.3 163990 135430 149520 194600 175310 217000 203910 193720 216190 195280 189820 178440 206910 180700 185020 226040 214670 226560 151540 124460 153810 191810 181020 217070 204240 199590 218490 196850 196680 182120 209670 188730 190400 226320 205190 215140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1457000000 2162 1031 2055 3975;3976;3977 3272;3273 3272 2 9606 Homo sapiens 0.09106576983413106 AQIHQFR Unmodified 898.47733 0.47733428 1592 Q13620-3;A0A7P0T954;Q13620;Q13620-1;K4DI93;A0A669KAX4;A0A7P0TAQ3;A0A7P0T9L3;A0A7P0T8P8;A0A7P0T9C8;A0A804CL36;A0A7P0T9D0;A0A669KBG9;A0A7P0T9P5;A0A7P0TAF9;A0A7P0T9R8;A0A7P0Z4G9 CUL4B Cullin-4B yes no 0 0 0 1.5 0.5 1 1 31.614 31.614 3 0.00183 6614 20230619_1880_Aki_TMTPro18x_K_F1 124.37 85.226 70011 51475 67534 70046 81022 89195 78573 78999 105160 74820 83510 90024 86009 65713 71494 81444 99536 81659 64677 47296 69028 69445 83074 88488 80169 81295 104670 76358 86830 89861 87002 69438 74548 81579 94841 77623 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19265000 2163 1592 2056 3978;3979 3274;3275;3276 3274 3 9606 Homo sapiens 0.02403471022944359 AQILAGGR Unmodified 784.45554 0.45553621 4365 Q96I99;Q3ZCW5;E9PDQ8;Q96I99-2;B7Z2D5 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 1.5 0.5 1 1 39.089 39.122 2 0.017076 9692 20230619_1880_Aki_TMTPro18x_K_F1 91.626 52.408 178620 133010 161300 161950 252990 257750 238380 248360 306610 133980 173140 159530 163090 132220 193470 136990 212340 154110 164940 122060 166690 162450 255110 253140 243120 251180 302570 142630 183460 160020 168270 137580 196890 138740 202580 146400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 281970000 2164 4365 2057 3980;3981 3277 3277 1 9606 Homo sapiens 0.05468666274384759 AQILEGLGIGPGEGSEEELHSASQR Unmodified 2563.2514 0.25142326 2804 CON__Q9N2I2 yes yes 0 0 0 3 0 1 57.48 57.513 3 1.931E-26 17417 20230619_1882_Aki_TMTPro18x_K_F3 170.68 164.7 + 8379.1 6517.8 9732.9 10808 8179.3 9292.2 9927 10289 12597 12798 16500 21815 12615 15368 15677 12588 16659 23836 7755.9 6001.7 9757.9 10537 8667.6 9528.6 9997.3 10517 12828 13068 16615 21487 13175 15907 15927 13333 15979 22494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49789000 2165 2804 2058 3982 3278 3278 1 0.032327603201338206 AQILGGANTPYEK Unmodified 1360.6987 0.69867961 562 A0A8V8TNE2;A0A024R9A9;Q9NPD8;A0A8V8TQ15 UBE2T Ubiquitin-conjugating enzyme E2 T yes no 0 0 0 7.5 0.5 1 1 50.08 50.159 3 4.3803E-11 13571 20230619_1888_Aki_TMTPro18x_K_F8 150.49 127.57 317930 231160 253410 297030 219360 277570 268550 267860 321650 393660 343160 310440 402950 297430 289460 418480 359700 290220 293280 212270 262570 294240 232390 281870 269650 277690 325990 388490 353320 318600 403690 313720 300910 411060 343000 277260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 379220000 2166 562 2059 3983;3984 3279;3280 3280 2 9606 Homo sapiens 0.032758214181058065 AQILPIR Acetyl (Protein N-term) 851.52289 0.52288749 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TRE8;A0A8V8TQK3;J3KS13;J3QL20 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 1 0 0 6.5 0.5 2 2 56.458 56.527 1;2 0.004146 16657 20230619_1886_Aki_TMTPro18x_K_F6 109.88 106.03 17538 16297 21388 18574 18054 18727 17812 20071 22853 27495 25956 30214 29162 25592 28311 29676 28849 34692 16260 14934 21334 18588 18999 18966 18152 20604 23151 27461 26657 30372 29625 26771 28842 30032 27638 32876 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 494600000 2167 826 2060 3985;3986;3987;3988 3281;3282;3283 3281 3 9606 Homo sapiens 0.09118696485336386 AQIWDTAGQER Unmodified 1273.6051 0.60511357 369;3946 H3BSC1;A0A024R5Z8;P62491;H3BMH2;P62491-2;Q15907-2;B4DMN1;Q15907 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B no no 0 0 0 4.2 0.748 1 2 2 45.91 45.97 2;3 1.1309E-17 12269 20230619_1882_Aki_TMTPro18x_K_F3 241.4 161.23 419860 354800 393720 388280 389050 463660 425450 422230 443670 507460 538100 517400 560390 468600 478400 576470 559990 550370 388120 325110 402060 390530 405750 462230 427610 436440 455030 508500 548440 523320 567290 490700 492950 575840 534940 523060 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 959890000 2168 369;3946 2061 3989;3990;3991;3992;3993 3284;3285;3286;3287 3284 4 9606 Homo sapiens -0.020744779643337097 AQLDEWK Unmodified 888.43413 0.43413207 3611 P49756;P49756-2;P49756-3;E9PQU5 RBM25 RNA-binding protein 25 yes no 0 0 0 5 0 1 50.264 50.34 2 0.0063709 13889 20230619_1885_Aki_TMTPro18x_K_F5 133.55 75.95 103740 77137 92651 87328 112470 131690 119050 109360 128840 116310 128400 116530 128500 94802 122410 111920 139990 113560 95782 70740 95328 87959 115520 129270 119930 113430 130650 117210 131700 117580 130770 99487 125480 112330 133590 107940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73473000 2169 3611 2062 3994 3288 3288 1 9606 Homo sapiens -0.014547635450071539 AQLDPAFIK Unmodified 1001.5546 0.55458155 1209 A0A140VJX3;P25325;P25325-2;Q2VEU1;B1AH49;Q59HD5 MPST 3-mercaptopyruvate sulfurtransferase;Sulfurtransferase yes no 0 0 0 7.33 0.471 2 1 54.725 54.79 2;3 0.00062531 15646 20230619_1887_Aki_TMTPro18x_K_F7 142.56 85.459 265460 221910 250000 246230 250680 307490 266470 275870 290470 302390 306490 293020 324250 269020 315750 341800 318560 322260 245380 203380 255260 247560 261040 305540 268620 284640 295330 303900 314450 297210 329900 282160 321530 341150 304790 306280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 824000000 2170 1209 2063 3995;3996;3997 3289;3290 3289 2 9606 Homo sapiens 0.05386644448617517 AQLDQTGQHLFCVCGTR Unmodified 1989.9149 0.91491352 3820 Q12788 TBL3 Transducin beta-like protein 3 yes yes 0 0 0 4.5 3.5 1 1 48.516 48.549 3 5.2923E-85 13769 20230619_1880_Aki_TMTPro18x_K_F1 285.06 264.97 147160 120790 128290 144900 129720 143040 155460 141600 157600 174020 164710 163090 195350 143660 152970 208340 184690 200420 135930 110790 132020 144340 135340 144780 155300 145680 160850 173760 169960 165470 196260 152370 158360 207690 176510 190390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 248940000 2171 3820 2064 3998;3999 3291;3292;3293 3291 3 9606 Homo sapiens -0.04044733802038536 AQLEACQQER Unmodified 1231.5615 0.5615342 687 A0A7P0Z4F5;A0A7P0TAC0;A0A7P0T9W6;A0A7P0Z4D0;A8KA84;A0A024RBQ5;A0A7P0T9J0;A0A7P0Z4F1;A0A7P0TAU8;Q9Y6K5 OAS3 2'-5'-oligoadenylate synthase 3 yes no 0 0 0 2 0 1 33.935 33.992 2 0.0052559 7266 20230619_1881_Aki_TMTPro18x_K_F2 90.108 72.723 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2172 687 2065 4000 3294 3294 1 9606 Homo sapiens -0.0449841073314019 AQLEGHAVQSTLQSEEWFR Unmodified 2215.0658 0.065794739 3438 P12036-2;P12036 NEFH Neurofilament heavy polypeptide yes no 0 0 0 5.5 0.5 1 1 55.267 55.338 3 2.3447E-39 15974 20230619_1885_Aki_TMTPro18x_K_F5 249.47 238.85 53547 46506 56077 36859 22337 26798 32865 33502 33131 68206 64137 69608 74538 64350 65224 82004 80979 85650 49551 42505 56114 37995 26163 28078 32635 34695 35117 67045 64837 70402 75310 67492 67451 82272 77360 81295 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145200000 2173 3438 2066 4001;4002 3295 3295 1 9606 Homo sapiens 0.006864473819859995 AQLENHEPEEEEEEEMETEEK Unmodified 2587.0392 0.03916638 92 A0A024R0H6;Q8N7H5-3;Q8N7H5-2;Q8N7H5;M0QYC7 PAF1 RNA polymerase II-associated factor 1 homolog yes no 0 0 0 1 0 1 45.575 45.575 4 0.012084 12572 20230619_1880_Aki_TMTPro18x_K_F1 58.339 51.063 6579.1 5432.4 4416 8889 6971.8 10522 8928.2 9526.2 14484 10470 10290 11402 12169 13844 10370 11651 14200 15894 6067.3 5000.3 4737.7 8700 7130.2 10479 9049.2 9824.1 14262 10575 10842 11612 12305 14076 10794 11978 13561 15045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24707000 2174 92 2067 4003 3296 3296 1 9606 Homo sapiens -0.190871636634256 AQLFALTGVQPAR Unmodified 1370.767 0.76703394 1976 A6NJA2;B2RD79;P54578-2;P54578-3;P54578;D3DUG9;B3KTG4;J3QQT6;J3KS55 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 5.5 0.5 1 1 58.477 58.538 2 2.4538E-10 17282 20230619_1885_Aki_TMTPro18x_K_F5 201.6 175 144080 136170 161780 156330 136800 143410 158150 157430 163030 191240 194760 182870 208820 172750 180080 221950 198370 214900 133490 124780 162440 156140 144510 146390 158480 160780 167220 191140 198860 185780 211270 181160 184880 221720 189740 204130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104890000 2175 1976 2068 4004;4005 3297;3298 3297 2 9606 Homo sapiens 0.0964811078861203 AQLFETSSK Unmodified 1009.508 0.50802529 2993 F8W8H5;Q969Q5 RAB24 Ras-related protein Rab-24 yes no 0 0 0 7 0 1 48.505 48.591 2 2.4102E-05 12940 20230619_1887_Aki_TMTPro18x_K_F7 132.01 87.563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2176 2993 2069 4006 3299 3299 1 9606 Homo sapiens 0.0036515982667424396 AQLGEDIRR Unmodified 1056.5676 0.56760585 1631 Q92734;Q92734-2;A0A6Q8PFY7;Q7Z426;Q92734-3;A0A6Q8PG04;A0A6Q8PF40;Q05BK6;A0A6Q8PGS4;Q8TDJ5;A0A6Q8PG00;A0A6Q8PH27;A0A6Q8PH89;A0A6Q8PFC4;Q92734-4;C9JJP5;C9JUE0;A0A6Q8PF51;C9JTY3 TFG;TFG/ALK fusion Protein TFG;Tyrosine-protein kinase receptor yes no 0 0 1 4.5 0.5 1 1 34.568 34.637 3 2.7818E-05 7363 20230619_1883_Aki_TMTPro18x_K_F4 158.08 88.479 159940 119890 162810 160670 205450 219920 197920 203060 237970 171050 207020 210590 211780 171220 193020 198240 225550 199100 147840 110130 165780 159670 209810 217470 201210 207700 238710 175910 214080 210720 215080 179350 198410 198840 215300 189190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 194040000 2177 1631 2070 4007;4008 3300;3301 3300 2 9606 Homo sapiens 0.041584755607118495 AQLGGPEAAK Unmodified 940.49779 0.49779495 3383 V9HW43;P04792;A0A6Q8PFK8;A0A6Q8PGK1;B4DL87;C9J3N8 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 0 0 0 5.5 0.5 1 1 40.556 40.646 2 4.3439E-05 9788 20230619_1885_Aki_TMTPro18x_K_F5 148.32 113.22 324540 151300 372420 414950 593080 711170 372440 486930 473820 506450 664100 818020 757900 673650 697800 324090 762550 791000 299650 140910 377880 400420 593200 690740 391970 513080 484920 520310 677570 810030 767710 681570 712030 358780 729180 746240 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 794350000 2178 3383 2071 4009;4010 3302;3303;3304 3302 3 9606 Homo sapiens 0.025165968920873638 AQLGLGHSYSR Unmodified 1187.6047 0.60471964 2138 A8K9K6;O00567;A0PJ92;A0A494C128;Q5JXT2 NOP56 Nucleolar protein 56 yes no 0 0 0 2 0.816 1 1 1 36.436 36.474 3 2.0681E-12 8259 20230619_1881_Aki_TMTPro18x_K_F2 200.66 159.54 231770 162800 235830 259480 297940 321320 267230 287560 323800 193480 203410 189400 209340 175180 229450 166430 244540 176820 214150 149900 240290 254730 303740 319300 272950 293530 321540 200720 214610 192040 214480 180750 233410 168210 233360 168080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 273950000 2179 2138 2072 4011;4012;4013 3305;3306 3306 2 9606 Homo sapiens 0.018421471064584694 AQLGPDESK Unmodified 943.46108 0.4610751 1641 P12081;P12081-4;E7ETE2;A0A6Q8PHA5;A0A6Q8PFF2;Q52NV4;P12081-2;P12081-3;A0A6Q8PF47;A0A6Q8PHE3;B4DDD8;B4E1C5;A0A6Q8PF07;B4DEA2;A0A6Q8PFG9;A0A6Q8PFN6;A0A6Q8PHQ0;D6RF05;A0A2R8YCI2;A0A2R8YFR1 HARS;HRS Histidine--tRNA ligase, cytoplasmic yes no 0 0 0 3 0 1 40.082 40.138 2 0.0030328 9693 20230619_1882_Aki_TMTPro18x_K_F3 111.61 63.758 26353 17928 32488 29247 38999 45679 32658 34448 37540 31732 42233 49248 41674 36592 38895 29383 42023 43158 24389 16514 32571 28802 39834 44658 33467 35889 38134 32759 43133 48727 42421 37782 39718 30452 40185 40842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26741000 2180 1641 2073 4014 3307 3307 1 9606 Homo sapiens -0.012916997244701633 AQLLEIAK Unmodified 884.53312 0.53311783 3474 P18583-5;P18583-9;P18583;P18583-7;P18583-4;P18583-3;P18583-10;P18583-6;P18583-2;H7C1M2;A0A994J4Y9;A0A8Q3SI10;Q6ZRV7;J3QSZ5;B3KRA1;H7C2G8 SON Protein SON yes no 0 0 0 7.5 0.5 1 1 55.714 55.774 2 0.0063325 15942 20230619_1888_Aki_TMTPro18x_K_F8 110.87 63.805 190870 158300 168050 184730 179440 214470 204000 197090 235670 136380 135210 105640 122410 98049 171540 155420 145520 103830 176330 145150 172920 184790 186360 214180 205150 200950 233960 140350 142810 108630 127680 104400 172030 152430 139190 99316 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 279070000 2181 3474 2074 4015;4016 3308 3308 1 9606 Homo sapiens 0.08623259419891838 AQLLQPTLEINPR Unmodified 1491.8409 0.84092717 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q5CAQ4;I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 3.67 3.09 1 1 1 56.48 56.505 3 1.0014E-05 17010 20230619_1880_Aki_TMTPro18x_K_F1 120.53 83.02 321630 248220 278730 311100 267850 369120 336840 320140 425130 315740 268640 269650 329400 271830 331050 340800 313980 304180 296970 227820 286860 309700 281750 367510 338190 330340 421660 318260 285750 275990 334350 284020 335710 339320 300510 289330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1146000000 2182 1211 2075 4017;4018;4019 3309;3310;3311 3309 3 9606 Homo sapiens 0.1146803416027069 AQLNETLTK Unmodified 1016.5502 0.55022446 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7;B3KWP6;B7Z6P3;H0YJP2;B3KP76 KTN1 Kinectin yes no 0 0 0 6.5 0.5 1 1 45.873 45.96 2 2.394E-05 12099 20230619_1886_Aki_TMTPro18x_K_F6 168 55.153 112740 80988 92498 105750 101580 114160 115110 104180 137060 136490 158350 163610 159000 142260 136100 161110 180060 180170 104010 74387 95871 104840 105250 114570 115940 108040 139210 137060 161500 164130 161250 148420 141360 162600 171860 170920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255270000 2183 380 2076 4020;4021 3312 3312 1 9606 Homo sapiens 0.042611352350377274 AQLPVMVIVTPQDR Unmodified 1565.8599 0.85994805 2472 B4DF80;Q9H6R4-4;Q9H6R4;A0A0A0MRW6;Q9H6R4-2;B3KPN5 NOL6 Nucleolar protein 6 yes no 0 0 0 2 0 1 61.158 61.168 3 0.021876 19094 20230619_1881_Aki_TMTPro18x_K_F2 58.079 35.161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2184 2472 2077 4022 3313 3313 1 9606 Homo sapiens 0.09965247459672355 AQLQDLNDR Unmodified 1071.5309 0.530886 2388 B3KQI5;P07196;I6L9F6;B3KXJ0 NEFL Neurofilament light polypeptide no no 0 0 0 2.5 0.5 1 1 40.323 40.388 2 7.3287E-07 9783 20230619_1882_Aki_TMTPro18x_K_F3 192.91 123.09 197120 173680 191530 124650 81752 80041 91532 92446 94825 169390 213510 212380 189600 172270 180440 201290 249400 217970 182320 158630 192860 129740 93818 84920 92206 95742 101320 168200 212410 212280 193930 180500 187550 202690 237740 206960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175270000 2185 2388 2078 4023;4024 3314 3314 1 9606 Homo sapiens -0.002018210558617284 AQLVEIVGCHFR Unmodified 1427.7344 0.73435361 3305 O75446 SAP30 Histone deacetylase complex subunit SAP30 yes yes 0 0 0 3 0 1 54.744 54.791 3 2.7457E-08 16260 20230619_1882_Aki_TMTPro18x_K_F3 153.49 132.64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2186 3305 2079 4025 3315 3315 1 9606 Homo sapiens 0.03759580394080331 AQNDLIWNIK Unmodified 1213.6455 0.64552182 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 4.5 3.5 1 1 59.664 59.683 2;3 9.3393E-07 17668 20230619_1888_Aki_TMTPro18x_K_F8 209.73 137.18 115720 78851 93443 98927 80257 122600 99127 103270 137690 149410 132490 166330 195070 191440 115820 244190 229740 302620 106720 72411 96646 98552 85316 121640 100070 108040 138040 149120 139050 169000 193660 199430 126180 247340 219220 286540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 128950000 2187 261 2080 4026;4027 3316;3317 3317 2 9606 Homo sapiens 0.04724488426086282 AQNISSNANMLR Unmodified 1317.6459 0.64593253 3873 Q14008-2;Q14008;Q14008-3;Q8IYN5 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 1 0 1 41.884 41.884 2 0.06743 10949 20230619_1880_Aki_TMTPro18x_K_F1 60.434 41.336 13966 9065.6 11526 15108 11983 15451 14507 12068 18839 13925 14401 16712 17811 9739.7 14084 15469 15506 13598 12879 8354.9 11943 14747 12509 15507 14603 12627 18756 14068 15145 16595 17858 10598 14472 15344 14809 12942 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27114000 2188 3873 2081 4028 3318 3318 1 9606 Homo sapiens -0.00018459916373103624 AQNKPFYVVAESFK Unmodified 1626.8406 0.84059282 3882 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 1 3 0 1 59.164 59.193 3 2.934E-09 18066 20230619_1882_Aki_TMTPro18x_K_F3 166.64 145.98 146240 133180 158550 176850 161420 169080 184580 165170 139070 128450 118740 67189 72101 54734 170180 49220 53298 29747 135420 122240 160200 174870 167800 171470 183360 168110 143420 129890 120620 70629 79546 56640 164200 48882 51962 28546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87950000 2189 3882 2082 4029 3319 3319 1 9606 Homo sapiens 0.052246144404307415 AQNLNPMVDVK Unmodified 1227.6282 0.6281572 107 A0A024R0R4;Q9UBE0;M0QZS6;B3KNJ4;Q9UBE0-2;Q9UBE0-3;A0A590UK93;A0A590UKC5;M0QX65;A0A590UKA0;M0QYM8;M0R054;M0R286 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes no 0 0 0 7 0 1 51.677 51.751 2 6.5484E-07 14363 20230619_1887_Aki_TMTPro18x_K_F7 158.79 128.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2190 107 2083 4030 3320 3320 1 9606 Homo sapiens 0.02344824828765013 AQNTWGCGNSLR Unmodified 1362.6099 0.60988137 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;P02545-4;P02545-5;Q5TCI8;B4DFR3 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 4.5 3.04 1 1 1 1 40.658 40.68 2 6.5513E-18 10375 20230619_1880_Aki_TMTPro18x_K_F1 237.68 201.35 637670 558180 562430 662430 887910 979340 1006000 1058400 1125000 770440 734270 712140 867290 610640 949860 655480 749600 653440 589320 511800 583410 664640 899810 967860 1010300 1067400 1122900 792690 777880 722200 883890 636300 951650 658940 718480 621020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 992970000 2191 1428 2084 4031;4032;4033;4034 3321;3322;3323 3321 3 9606 Homo sapiens -0.05691917093236043 AQPAQPADEPAEK Unmodified 1350.6416 0.64155866 2961 F5GX11;V9HW55;P25786;P25786-2 PSMA1;HEL-S-275 Proteasome subunit alpha type-1 yes no 0 0 0 2.5 0.5 1 1 37.374 37.431 3 5.5222E-05 8654 20230619_1881_Aki_TMTPro18x_K_F2 110.91 96.648 148310 75934 132950 155130 180600 214430 154410 175140 199910 170160 204080 225310 232980 192760 179210 196360 249370 239110 136700 70283 137190 150720 183360 211230 158660 181440 201200 173990 210530 225070 234330 200160 187120 199620 237840 226700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 285800000 2192 2961 2085 4035;4036 3324;3325 3324 2 9606 Homo sapiens -0.01973645858333839 AQPAQPADEPAEKADEPMEH Oxidation (M) 2175.9379 0.93787661 2961 F5GX11;V9HW55;P25786;P25786-2 PSMA1;HEL-S-275 Proteasome subunit alpha type-1 yes no 0 1 1 1.5 0.5 1 1 37.487 37.517 3 9.5863E-05 8999 20230619_1880_Aki_TMTPro18x_K_F1 85.054 79.08 109060 107300 121020 114670 165110 110030 156380 129180 84875 121780 154350 57909 68498 40469 179700 34753 36536 10759 101060 98255 122500 115250 166960 112300 155990 130490 93337 121370 150910 61300 77565 42124 172070 34173 36163 10567 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 117660000 2193 2961 2086 4037;4038 3326;3327;3328;3329 3326 1755 4 9606 Homo sapiens -0.10305480994202298 AQPAQPADEPAEKADEPMEH Unmodified 2159.943 0.94296199 2961 F5GX11;V9HW55;P25786;P25786-2 PSMA1;HEL-S-275 Proteasome subunit alpha type-1 yes no 0 0 1 1 0 1 40.38 40.38 3 7.2929E-08 10254 20230619_1880_Aki_TMTPro18x_K_F1 110.56 106.38 52306 51952 68582 55965 70727 57206 78074 68688 42176 67001 73414 32463 36745 21603 85589 15769 20128 5424.9 48555 47572 68255 56277 73174 58096 77223 69330 46304 66654 72077 34205 40813 22396 82173 15606 19790 5316.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79014000 2194 2961 2086 4039 3330 3330 1 9606 Homo sapiens -0.09061177131616205 AQPEEEDEDEVSMK Oxidation (M) 1650.6567 0.65667595 4059 Q5T1M5;A0A8I5QJ94;Q5T1M5-2;A0A8I5QJL3;B4DVS2 FKBP15 FK506-binding protein 15 yes no 0 1 0 1 0 1 40.596 40.596 3 0.0071944 10390 20230619_1880_Aki_TMTPro18x_K_F1 66.246 62.278 15113 9604.5 17658 18877 21913 25383 18290 19989 18512 17530 24727 23130 20962 20566 22755 17952 22222 23352 13975 8873.9 17797 18364 22327 25028 18674 20724 19084 18022 24907 23145 21611 21153 23051 18403 21275 22118 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25622000 2195 4059 2087 4040 3331 3331 2661 1 9606 Homo sapiens -0.14262611633967026 AQPLEDLAGLK Unmodified 1153.6343 0.63428844 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 5.5 0.5 1 1 59.372 59.429 3 4.4119E-05 17876 20230619_1886_Aki_TMTPro18x_K_F6 133.05 94.258 95347 75911 84978 79231 56287 76237 74413 69665 78448 96085 101900 73987 114220 84563 85220 107350 84769 79996 88071 69546 86723 79763 61360 77182 74172 72351 80688 95018 103760 76601 114690 88125 87266 105920 81078 76288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128820000 2196 3588 2088 4041;4042 3332 3332 1 9606 Homo sapiens 0.06361666331940796 AQPSASLGVGYR Unmodified 1204.62 0.62003536 1111 A0A0S2Z4Z0;Q96PK6;Q59GV2 RBM14 RNA-binding protein 14 yes no 0 0 0 3.67 3.09 1 1 1 42.209 42.236 2 3.5852E-14 11045 20230619_1880_Aki_TMTPro18x_K_F1 218.11 169.82 208040 177530 190180 210520 220150 250320 245510 239000 251680 262060 263190 256790 283720 229900 245400 297940 295920 266390 192280 162790 195280 210420 227030 249840 246240 245540 256630 263420 270350 260110 287060 241640 253280 296400 282440 253460 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 398650000 2197 1111 2089 4043;4044;4045 3333;3334 3333 2 9606 Homo sapiens 0.02591013903656858 AQPSVSLGAAYR Unmodified 1218.6357 0.63568542 1111 A0A0S2Z4Z0;Q96PK6;Q59GV2 RBM14 RNA-binding protein 14 yes no 0 0 0 1.5 0.5 1 1 44.19 44.231 2 2.5642E-17 11774 20230619_1881_Aki_TMTPro18x_K_F2 222.34 166.67 195970 164040 171780 185570 191080 226260 215030 207630 226070 143010 131730 118430 125640 99914 166830 150160 155530 110620 181050 150360 176920 186200 197750 225250 215670 211680 225690 147390 139370 120860 130390 106320 168180 147950 148610 105650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190650000 2198 1111 2090 4046;4047 3335;3336 3336 2 9606 Homo sapiens 0.03511300420700536 AQPWWTPK Unmodified 1012.5131 0.51305109 3822 Q12797;Q12797-10 ASPH Aspartyl/asparaginyl beta-hydroxylase yes no 0 0 0 3 0 1 55.459 55.5 3 0.021761 16557 20230619_1882_Aki_TMTPro18x_K_F3 72.879 45.137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2199 3822 2091 4048 3337 3337 1 9606 Homo sapiens 0.00729508479935248 AQQATPGGAAPTIFSR Unmodified 1571.8056 0.80560429 4004 Q8WYJ5;Q53HJ8;Q9BX68 HINT2 Histidine triad nucleotide-binding protein 2, mitochondrial yes no 0 0 0 1.5 0.5 1 1 47.048 47.086 2 2.8365E-14 13099 20230619_1881_Aki_TMTPro18x_K_F2 185.95 120.32 51298 47681 46434 58786 53696 57200 58539 67926 68953 58157 67609 63138 64323 60365 66971 68393 65837 82098 47437 43726 47759 58434 55334 58209 59081 68369 69555 59454 69269 63826 65914 62783 68007 69359 63115 77772 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101660000 2200 4004 2092 4049;4050 3338 3338 1 9606 Homo sapiens 0.04257371632456852 AQQDQLVLIFAGK Unmodified 1429.7929 0.79291434 2631 B4DZF6;Q59F94;Q9NRR5;Q9H8R7;Q9NRR5-2 UBQLN4 Ubiquilin-4 yes no 0 0 0 1.5 0.5 1 1 63.006 63.011 3 4.0744E-05 19993 20230619_1881_Aki_TMTPro18x_K_F2 113.99 93.561 103900 83051 105980 107460 96493 107530 99760 108460 110120 111960 116860 124830 121540 116000 115390 141440 116940 150860 96077 76241 107340 106520 101070 108750 100800 110830 111900 113340 119850 125870 123690 121240 117700 142170 112110 143060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117440000 2201 2631 2093 4051;4052 3339 3339 1 9606 Homo sapiens 0.09520960240206477 AQQEAEAAQR Unmodified 1100.521 0.52104959 1550 A0A494C0X0;Q99426-2;Q99426;K7EP07;K7EK42 TBCB Tubulin-folding cofactor B yes no 0 0 0 1 0 1 28.893 28.893 2 0.0031047 5567 20230619_1880_Aki_TMTPro18x_K_F1 94.692 63.27 4617.5 1248 7172.8 8007.3 11716 12713 7939.8 11001 6357.7 3559 13121 14279 6326.7 10381 12681 1733.9 13130 13186 4271.4 1202.1 7146.4 7574.3 11695 12440 8190.8 11153 6807.5 4320.4 12865 13868 7005.3 10366 12746 2559.9 12559 12403 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4204000 2202 1550 2094 4053 3340 3340 1 9606 Homo sapiens -0.025190090612568383 AQQEDALAQQAFEEAR Unmodified 1803.8388 0.83875492 417;2099 A0A024R6X2;Q13951;J3KS23;A0A494C0A9;A8K719;Q13951-2 CBFB Core-binding factor subunit beta no no 0 0 0 1.5 0.5 1 1 52.88 52.897 3 1.8724E-14 15530 20230619_1880_Aki_TMTPro18x_K_F1 174.78 156.64 139580 119150 127950 157360 136900 158560 180880 179420 233800 168050 145820 178760 199680 160180 185840 205090 194640 177550 129010 109370 131310 155770 142820 160670 181330 181560 231550 170890 156370 180320 201420 168210 189800 203790 186020 168990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 485790000 2203 417;2099 2095 4054;4055 3341;3342 3341 2 9606 Homo sapiens -0.03101091106145759 AQQEFAAGVFSNPAVR Unmodified 1690.8427 0.84271808 3224 Q6FHJ5;O14828-2;O14828 SCAMP3 Secretory carrier-associated membrane protein 3 yes no 0 0 0 8 0 1 54.854 54.921 3 1.4604E-15 15659 20230619_1888_Aki_TMTPro18x_K_F8 192.78 178.77 51008 43314 57192 60822 48432 54032 51160 58153 59173 67263 65017 61190 68724 60649 63869 75579 70183 68569 47224 39789 57465 59888 51069 55237 51731 59360 60116 67288 66571 62406 69810 63356 65445 75287 67078 65207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 322060000 2204 3224 2096 4056 3343 3343 1 9606 Homo sapiens 0.024930431782195228 AQQEQAAHQASLR Unmodified 1436.712 0.71203826 2335 O95359;O95359-5;Q4VXL4;O95359-2;D6RAA5;O95359-6;Q4VXL8;O95359-1;E7EMZ9;B2RWP4;O95359-3;E9PBC6;B7ZMJ9;A0A0U1RRM9 TACC2 Transforming acidic coiled-coil-containing protein 2 yes no 0 0 0 4 0 1 28.62 28.692 3 0.00011536 5081 20230619_1883_Aki_TMTPro18x_K_F4 100.11 90.524 3457 2699.9 4023.1 4034.6 5115.9 5488.7 4134.4 4744.2 6166.2 5070.8 6154 6950.3 5366.5 5700.9 5966.4 3685.9 6857.3 5453.4 3200.1 2482.8 4055.6 3982 5202.4 5421.3 4290.3 4904.8 6162.3 5167.1 6286 6919.3 5538.9 5811.1 6091.9 3844.8 6542.7 5166.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5623100 2205 2335 2097 4057 3344 3344 1 9606 Homo sapiens 0.011150722500360644 AQQEQELAADAFK Unmodified 1447.6943 0.69432251 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;A0A0S2Z4D8;A0A0S2Z4W7;A2VCQ4;A0A0S2Z4A0 PRKCSH Glucosidase 2 subunit beta yes no 0 0 0 2.8 0.748 2 2 1 52.932 52.974 2;3 1.2767E-56 15481 20230619_1882_Aki_TMTPro18x_K_F3 332.53 297.18 272290 227560 251600 290740 280250 354720 312480 296320 385730 264020 296850 314800 307730 243560 291930 369650 341080 358400 251660 208840 258060 289140 290200 352340 315320 305980 384850 270370 309360 315070 312970 260280 300290 368530 325990 340470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2352800000 2206 444 2098 4058;4059;4060;4061;4062 3345;3346;3347 3346 3 9606 Homo sapiens -0.011616877955020755 AQQGEVMR Unmodified 917.4389 0.43889987 2082 A8K5Y7;Q9HAV4;B3KPQ5;Q9H8N6 XPO5 Exportin-5 yes no 0 0 0 2.5 0.5 1 1 30.62 30.696 2 0.0055228 5860 20230619_1882_Aki_TMTPro18x_K_F3 113.26 90.185 19846 12393 28784 30545 34833 38518 26200 31224 26647 22143 35451 39744 32489 32510 35636 16050 44126 38329 18393 11498 28593 29416 35445 38138 26969 32159 27449 23405 35869 39265 33438 32902 36535 17711 42097 36190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22054000 2207 2082 2099 4063;4064 3348 3348 1 9606 Homo sapiens -0.02312202673874708 AQQGIVFLDEVDK Unmodified 1460.7511 0.75110911 364 Q9H072;A0A024R5X7;O76031 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes no 0 0 0 4 0 1 61.268 61.271 3 0.00045104 18840 20230619_1883_Aki_TMTPro18x_K_F4 92.65 70.777 55069 45625 53936 60106 55012 69900 64001 63093 85363 58975 52064 52671 64222 50853 51956 62566 59655 59847 50917 41886 54955 59621 57406 69748 64639 64816 84369 59700 55511 53707 64574 53159 53531 62503 57005 56871 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37349000 2208 364 2100 4065 3349 3349 1 9606 Homo sapiens 0.039163597610240686 AQQLEEAR Unmodified 943.47231 0.47230849 4088 Q643R0;Q9ULW0;Q9ULW0-2;Q96FC3 HCTP4;TPX2 Targeting protein for Xklp2 yes no 0 0 0 2 0 1 34.426 34.482 2 0.074654 7461 20230619_1881_Aki_TMTPro18x_K_F2 60.59 37.809 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2209 4088 2101 4066 3350 3350 1 9606 Homo sapiens -0.0016887763034674208 AQQLSITSK Unmodified 974.53966 0.53965977 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;G3V4Y7;G3V5G2 KTN1 Kinectin yes no 0 0 0 1 0 1 44.821 44.821 3 0.00023514 12206 20230619_1880_Aki_TMTPro18x_K_F1 121.8 92.324 55588 37392 52591 50520 57878 54087 56139 55520 65351 57670 69991 65634 64890 49335 64923 49652 70059 66479 51320 34367 53724 49996 59593 54474 57006 56683 66205 58411 71344 65705 66346 51496 66211 50884 66957 62977 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48372000 2210 380 2102 4067 3351 3351 1 9606 Homo sapiens 0.05137152580596194 AQQMHTGPVLDVCWSDDGSK Unmodified 2229.9783 0.97830164 3757 P78406;Q5J8M4;E9PQ57;E9PPG9;B0QZ36 RAE1 mRNA export factor yes no 0 0 0 5 0 2 52.618 52.689 3;4 4.4438E-08 14918 20230619_1885_Aki_TMTPro18x_K_F5 112.44 102.78 65532 60443 70783 76674 61751 70776 74655 75088 84979 87498 86981 79826 94264 84392 85244 104850 105470 103260 60684 55447 71371 76026 65212 72113 74870 76754 86094 87537 89420 81606 95599 87978 88063 104880 100700 98100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139950000 2211 3757 2103 4068;4069 3352;3353 3352 2 9606 Homo sapiens -0.08748837875418758 AQQNHALLER Unmodified 1178.6156 0.61561868 1012 B4DDR0;A0A0C4DH01;Q53GZ2;Q9NVU0-3;Q9NVU0-2;Q9NVU0-5;Q9NVU0-4;Q9NVU0 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes no 0 0 0 4.5 0.5 1 1 30.643 30.714 3 5.715E-06 5940 20230619_1885_Aki_TMTPro18x_K_F5 160.36 117.11 25955 19153 22916 22330 27836 29948 24137 26391 32348 25403 26406 26196 26396 26469 28292 28391 33240 30302 23962 17570 23598 22395 28443 29627 24811 27168 32240 25772 27376 26575 27068 27381 29008 28609 31736 28771 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46080000 2212 1012 2104 4070;4071 3354 3354 1 9606 Homo sapiens 0.03345549480764021 AQQNLSWEEIAK Unmodified 1415.7045 0.70449327 4033 Q5HYK3;F8VVX6;F8VP53;F8VVW7 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 54.941 55.013 3 6.4439E-07 16036 20230619_1886_Aki_TMTPro18x_K_F6 146.07 100.81 99285 91574 109740 112470 114310 125420 130790 124020 145230 115040 105870 110280 119150 95971 110000 112390 111150 120790 91959 83978 110710 112050 118780 125820 131320 126570 145520 116650 111100 111670 120730 100390 112090 113150 106400 114600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159040000 2213 4033 2105 4072;4073 3355;3356 3356 2 9606 Homo sapiens 0.013269199297610612 AQQSLELIQSK Unmodified 1243.6772 0.67721588 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7;B3KWP6;B7Z6P3;H0YJP2;B3KP76 KTN1 Kinectin yes no 0 0 0 7.67 0.471 1 2 52.206 52.282 2 1.0017E-22 14592 20230619_1887_Aki_TMTPro18x_K_F7 244.27 201.02 35123 26964 28709 35379 31244 32254 35997 31903 35054 48830 44989 43600 49990 40232 42405 52773 52633 50336 32416 24760 29775 34986 32368 32854 35989 33085 36232 48260 45900 44387 50491 42289 43874 52662 50244 47844 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111530000 2214 380 2106 4074;4075;4076 3357;3358 3357 2 9606 Homo sapiens 0.06512436389380127 AQQVSQGLDVLTAK Unmodified 1456.7886 0.78855725 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9 VCL;HEL114 Vinculin yes no 0 0 0 4.5 3.5 1 1 56.43 56.458 2;3 2.3858E-08 17012 20230619_1880_Aki_TMTPro18x_K_F1 145.49 126.25 49599 45979 53887 62755 79373 86883 81679 80755 96072 72733 69843 68660 78618 63303 74326 84137 74500 82438 45934 42211 54839 62283 80480 85860 82610 82679 95972 73864 73281 69749 79744 66600 75723 84087 71334 78289 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104450000 2215 51 2107 4077;4078 3359;3360 3359 2 9606 Homo sapiens 0.07843451026656112 AQREDELTFIK Unmodified 1348.6987 0.69867961 3477 P19174;P19174-2 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes no 0 0 1 5 0 1 48.14 48.217 3 0.016058 12981 20230619_1885_Aki_TMTPro18x_K_F5 66.326 43.998 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2216 3477 2108 4079 3361 3361 1 9606 Homo sapiens 0.03827821418053645 AQSADTSWR Unmodified 1020.4625 0.46247208 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 3.5 0.5 1 1 35.992 36.042 2 2.9526E-17 7932 20230619_1883_Aki_TMTPro18x_K_F4 253.05 170.81 170090 128540 171920 157570 223460 254950 281100 294980 367590 293040 264190 243890 351540 225480 243770 231220 334960 252090 157220 117960 175290 158130 229730 251240 282540 298220 365360 294880 279480 249130 350510 233950 254670 233510 319030 239520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 321900000 2217 2830 2109 4080;4081 3362;3363 3363 2 9606 Homo sapiens -0.046940656357151056 AQSELAAHQK Unmodified 1081.5516 0.55162144 2961 F5GX11;V9HW55;P25786;P25786-2;B4E0X6;B4DEV8 PSMA1;HEL-S-275 Proteasome subunit alpha type-1;Proteasome subunit alpha type yes no 0 0 0 5 0 1 33.686 33.771 3 0.0012471 7092 20230619_1885_Aki_TMTPro18x_K_F5 78.548 51.067 19795 9239.1 24326 21834 39327 37768 22689 30074 46417 19111 27192 29716 23424 23603 26356 10208 25047 21875 18289 8578.6 24530 21198 39213 36789 24579 30932 45090 20285 28651 29446 24194 23833 26584 11189 23955 20665 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16017000 2218 2961 2110 4082 3364 3364 1 9606 Homo sapiens 0.014107693237747299 AQSINITELNLPQLEMLK Acetyl (Protein N-term) 2096.1187 0.11874151 4401 Q99471;H3BPF6;H3BMQ1;Q99471-3;A0A7I2V5H9;Q99471-2;F8VQZ2 PFDN5 Prefoldin subunit 5 yes no 1 0 0 7.5 0.5 1 1 67.099 67.12 3 1.5411E-13 20940 20230619_1887_Aki_TMTPro18x_K_F7 92.211 73.379 103400 91979 101600 104900 79400 94391 109660 100540 102440 126040 121070 116370 130550 105960 121760 140710 128930 134230 95652 84299 103060 104790 85053 96408 108620 103020 105610 125660 123740 118260 132480 111510 124470 140420 123330 127540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 288620000 2219 4401 2111 4083;4084 3365;3366;3367 3365 3 9606 Homo sapiens 0.11452689120415016 AQSINITELNLPQLEMLK Acetyl (Protein N-term);Oxidation (M) 2112.1137 0.11365613 4401 Q99471;H3BPF6;H3BMQ1;Q99471-3;A0A7I2V5H9;Q99471-2;F8VQZ2 PFDN5 Prefoldin subunit 5 yes no 1 1 0 7.5 0.5 1 1 66.055 66.077 3 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 147560000 2220 4401 2111 4085;4086 0 9606 Homo sapiens 0.10208385257828922 AQSLTTCEVCGACFETR Unmodified 1988.839 0.83903097 1591 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A669KAV7;O95785-4;O95785-3 WIZ Protein Wiz yes no 0 0 0 5 0 1 49.38 49.457 3 2.7864E-18 13527 20230619_1885_Aki_TMTPro18x_K_F5 171.98 163.16 24927 22433 27286 31051 23692 27652 27534 26489 34777 32614 33072 39083 36353 31334 31291 40872 42370 37098 23082 20600 27492 30594 25012 28187 27769 27325 34951 32833 34192 39107 36775 33066 32570 40682 40396 35295 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51784000 2221 1591 2112 4087 3368 3368 1 9606 Homo sapiens -0.1158349876450302 AQSSQDAVSSMNLFDLGGQYLR Unmodified 2386.1223 0.12232334 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8;A0A0J9YVR6;A0A0J9YWM1;H0YCP8 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 0 0 1 0 1 63.752 63.752 3 1.2472E-57 20014 20230619_1880_Aki_TMTPro18x_K_F1 291.33 265.5 14753 10834 13178 15123 10320 13894 13603 12597 13533 17751 16625 16178 17371 13369 17605 19256 15601 15559 13620 9957.6 13489 14898 11055 14106 13529 13104 13933 17607 16946 16402 17702 14197 17797 19045 14946 14818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88793000 2222 1044 2113 4088 3369 3369 1 9606 Homo sapiens -0.015292928436338116 AQTEGINISEEALNHLGEIGTK Unmodified 2323.1656 0.16556836 1442 B5BUB1;A0A384MTR5;Q9Y265;H7C4G5;J3QLR1 RUVBL1 RuvB-like 1 yes no 0 0 0 6 0 1 61.177 61.232 3 4.1145E-07 18635 20230619_1886_Aki_TMTPro18x_K_F6 94.259 80.244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2223 1442 2114 4089 3370 3370 1 9606 Homo sapiens 0.05691220205335412 AQTGAPCLSFDIVR Unmodified 1533.761 0.76096229 2321 Q8TCJ8;Q8NCK5;B2RDP6;Q9BQ67 DKFZp564C172;GRWD1 Glutamate-rich WD repeat-containing protein 1 yes no 0 0 0 4.5 3.5 1 1 56.926 56.982 2 9.1936E-13 17268 20230619_1880_Aki_TMTPro18x_K_F1 158.25 129.17 39501 33749 34683 42309 36167 38450 37907 37753 41990 41977 34800 29648 36359 29808 37453 48645 40542 35022 36498 30964 35696 41965 37499 39166 38250 38738 42289 41825 36087 30705 37114 31735 38297 47783 38722 33429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28993000 2224 2321 2115 4090;4091 3371;3372 3371 2 9606 Homo sapiens 0.01543224494776041 AQTGSGFLPSQLLDQNMK Oxidation (M) 1949.9517 0.95167618 604 E9PDL4;A0A3B3IST8;A0A024RA29;Q05084-3;Q05084;Q05084-2 ICA1 Islet cell autoantigen 1 yes no 0 1 0 1 0 1 59.965 59.965 3 0.0006077 18479 20230619_1880_Aki_TMTPro18x_K_F1 77.221 60.727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2225 604 2116 4092 3373 3373 346 1 9606 Homo sapiens 0.014698412955340245 AQTLPTSVVTITSESSPGK Unmodified 1901.9946 0.99458686 2337 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 7.5 0.5 1 1 55.98 56.04 3 2.6364E-15 16176 20230619_1888_Aki_TMTPro18x_K_F8 166.91 150.03 49771 40823 43717 52775 42401 57313 52120 54894 64903 61823 65001 70802 71634 67510 52975 77995 80511 96937 45976 37472 44964 52358 44524 57522 52389 56431 65394 62398 66990 71363 72088 70302 55861 79183 76880 91810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152010000 2226 2337 2117 4093;4094 3374 3374 1 9606 Homo sapiens 0.07966934624619171 AQTLPTSVVTITSESSPGKR Unmodified 2058.0957 0.095697884 2337 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 1 2.5 0.5 1 1 50.593 50.645 3;4 8.897E-35 14407 20230619_1882_Aki_TMTPro18x_K_F3 214.46 201.79 178260 137530 155900 158040 166980 174430 172110 176490 222890 156280 156810 153010 161340 136250 172090 157090 154770 154780 164600 126120 160390 158200 172770 175230 174780 179600 221380 159050 164210 154940 165040 142210 173760 157470 148250 147030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117090000 2227 2337 2118 4095;4096 3375;3376;3377 3377 3 9606 Homo sapiens 0.10897386327314962 AQTMSNSGIK Oxidation (M) 1051.4968 0.49680868 1746 A0A8C8MUD1;Q12904;Q12904-2;B4DNK3;A0A8C8KIA0 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 1 0 7 0 1 34.704 34.78 2 0.077537 7235 20230619_1887_Aki_TMTPro18x_K_F7 56.563 35.056 6130 2604.5 6349.4 7603.8 10254 12608 9976.5 10206 8614 4086.2 6924.3 11897 6265.7 6382.4 11453 4003 9485.3 8571.3 5652.9 2430.7 6502 7318.8 10339 12296 10029 10430 8767.2 4697.6 7202.4 11517 6668.9 6633.9 11404 4342.1 9088.1 8096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3541400 2228 1746 2119 4097 3378 3378 1139 1 9606 Homo sapiens -0.026879855391143792 AQTMSNSGIK Unmodified 1035.5019 0.50189405 1746 A0A8C8MUD1;Q12904;Q12904-2;B4DNK3;A0A8C8KIA0 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 0 0 8 0 1 39.911 39.9 2 1.3596E-06 9440 20230619_1888_Aki_TMTPro18x_K_F8 195.27 105.97 25980 13015 32505 28635 41358 54188 29066 40023 39992 20019 33848 38536 27914 24920 40591 16729 41556 33110 24015 12063 32590 27934 42003 52464 30395 41289 39800 21899 34812 37798 29293 25725 40966 17940 39692 31305 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7545600 2229 1746 2119 4098 3379 3379 1 9606 Homo sapiens -0.014436816765055482 AQTYELQESNVQLK Unmodified 1649.8261 0.82606496 2109 E7EW69;A8K7M3;E7EX04;B5ME97;Q9P0V9;Q9P0V9-2;Q9P0V9-3 SEPT10 Septin-10 yes no 0 0 0 5 0.816 1 1 1 51.204 51.264 3 1.8847E-16 14306 20230619_1885_Aki_TMTPro18x_K_F5 203.29 184.46 148200 124890 145140 131130 136070 166110 159720 155850 178290 189790 187180 191860 207440 178690 191650 221450 204940 220440 137030 114400 147500 132480 142820 165090 160280 160790 181030 190050 192560 194260 210340 187020 196060 221700 196060 209330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 246720000 2230 2109 2120 4099;4100;4101 3380;3381;3382 3381 3 9606 Homo sapiens 0.027144975015971795 AQVADVVVSR Unmodified 1042.5771 0.57710791 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 6 0.816 1 1 1 43.235 43.32 2 0.00027294 10914 20230619_1885_Aki_TMTPro18x_K_F5 137.98 96.528 781410 598090 652080 636200 550470 607860 644640 602280 701330 897750 989340 928150 946810 787080 747960 1051800 1030900 840410 721270 548120 671450 639440 582710 617100 646700 623790 723330 892010 998920 936440 958220 830230 781320 1040100 982260 801160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1673599999.9999998 2231 3606 2121 4102;4103;4104 3383;3384 3383 2 9606 Homo sapiens 0.057522438462456194 AQVAMSTLPVEDEESSESR Acetyl (Protein N-term);Oxidation (M) 2121.9372 0.93720791 2144;1327 A0A1W6S962;X5D7Q9;P78347-5;A0A0A0VEB4;C9J6M0;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939 GTF2I;GTF2I-RARA General transcription factor II-I no no 1 1 0 1 0 1 50.838 50.838 3 5.1726E-13 14703 20230619_1880_Aki_TMTPro18x_K_F1 105.38 99.597 41843 41677 45222 49608 50568 56199 48351 51561 53498 48559 49691 48538 50137 43810 56168 47718 85333 52518 38769 38198 45763 49532 52039 56225 49057 52908 54061 49245 51196 49119 51496 45560 58552 48190 81137 49952 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 50495000 2232 1327;2144 2122 4105 3385;3386 3385 833 2 9606 Homo sapiens -0.07888320433858098 AQVAMSTLPVEDEESSESR Acetyl (Protein N-term) 2105.9423 0.94229329 2144;1327 A0A1W6S962;X5D7Q9;P78347-5;A0A0A0VEB4;C9J6M0;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939 GTF2I;GTF2I-RARA General transcription factor II-I no no 1 0 0 1 0 1 58.625 58.625 2 4.2639999999999997E-60 17947 20230619_1880_Aki_TMTPro18x_K_F1 239.39 230.64 1554 1483 783.5 2430.3 1671 1458.2 605.74 1710.7 2344.7 1075.5 1075.5 2348 2038 2245.1 1976.4 1333.7 1468.5 2631.8 1432.5 1364.3 881.75 2359.7 1640.3 1554 727.65 1713.2 2237.9 1162.1 1213.9 2317.5 2049.9 2269.8 1979.4 1430 1418.1 2481.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 439410000 2233 1327;2144 2122 4106 3387 3387 1 9606 Homo sapiens -0.06644016571272005 AQVARPGGDTIFGK Unmodified 1415.7521 0.75211216 1477 A0A384NPU2;P49773;D6REP8;D6RE99;H0YC49;D6RD60;A0A6Q8PGQ8;D6RC06 HINT1 Histidine triad nucleotide-binding protein 1 yes no 0 0 1 2 0.816 1 1 1 45.954 46.006 3 5.9849E-05 12547 20230619_1881_Aki_TMTPro18x_K_F2 102.38 73.475 802890 711390 740960 731840 740690 742390 803450 850370 833920 859850 900810 845650 924000 754530 923890 997260 910000 884630 742320 651400 757660 738220 770520 752960 807820 861330 850760 867760 921930 856620 942000 794160 939120 991790 870640 841510 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5190100000 2234 1477 2123 4107;4108;4109 3388;3389 3389 2 9606 Homo sapiens 0.06086618920608089 AQVEQELTTLR Unmodified 1286.683 0.68302954 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 0 3.5 0.5 1 1 51.425 51.471 2 0.00017496 14641 20230619_1883_Aki_TMTPro18x_K_F4 131.42 77.45 61528 58049 61010 62599 61713 81429 89275 81689 92038 90930 84754 95471 104810 84388 87519 114210 101630 115270 56944 53164 62083 63123 64867 80897 88455 83674 93342 91539 88255 96343 105500 89017 90231 114260 97201 109420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147960000 2235 3921 2124 4110;4111 3390 3390 1 9606 Homo sapiens 0.051155349010286955 AQVFSCPACR Unmodified 1194.5274 0.5273973 809;4387 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2;B4E0F9;A0A087WWG9;Q96PU4 UHRF1;UHRF2 E3 ubiquitin-protein ligase UHRF1;E3 ubiquitin-protein ligase UHRF2 no no 0 0 0 2 0 1 41.159 41.235 2 0.00043467 10398 20230619_1881_Aki_TMTPro18x_K_F2 125.82 110.25 62235 55696 66203 71204 66877 84796 75587 71183 87332 88783 101850 77013 90917 79654 78572 95451 98205 80179 57611 51101 66980 70793 69730 84372 76080 74134 88862 88458 103140 78913 92574 82893 81286 94773 93648 76382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62947000 2236 809;4387 2125 4112 3391 3391 1 9606 Homo sapiens -0.06208530425715253 AQVIYTR Unmodified 849.47085 0.47085192 3727 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 0 4.8 2.79 1 1 1 1 1 38.374 38.413 2 0.011257 9339 20230619_1880_Aki_TMTPro18x_K_F1 116.88 100.33 1293300 981960 1110500 1279700 1288900 1404500 1304600 1307200 1643600 1545100 1522900 1387700 1658300 1287500 1290300 1518700 1793100 1453100 1193900 901690 1147000 1269200 1325900 1408600 1324900 1348400 1650700 1544400 1572700 1412800 1670400 1344300 1347300 1518200 1708400 1382100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3266299999.9999995 2237 3727 2126 4113;4114;4115;4116;4117 3392;3393;3394;3395 3392 4 9606 Homo sapiens 0.040095330715644195 AQVLAGGR Unmodified 770.43989 0.43988615 1360 Q9P2R7;Q9P2R7-2;A0A2R8Y6Y7;Q6N0B1;E5KS55;E5KS60;A0A2R8YDQ9;B4DRV2;B7ZAF6;Q7Z503;Q5T9Q5;A0A2R8Y6E6;A0A2R8Y5P6;A0A0U1RQF8 SUCLA2;DKFZp686D0880 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 8 0 1 35.674 35.663 2 0.0048091 7756 20230619_1888_Aki_TMTPro18x_K_F8 104.21 67.652 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2238 1360 2127 4118 3396 3396 1 9606 Homo sapiens 0.04548379757341081 AQVLGHVEQLK Unmodified 1220.6877 0.68772099 240 A0A024R3F4;A0A024R3H6;Q86UU1-2;Q86UU1;Q96D60;B0YJ65;Q6ZUD6;Q5W9G0;Q86UU1-3 PHLDB1;KIAA0638 Pleckstrin homology-like domain family B member 1 yes no 0 0 0 8 0 1 48.1 48.158 3 6.9408E-05 12741 20230619_1888_Aki_TMTPro18x_K_F8 125.28 86.881 173770 146500 157820 178990 171120 196150 208030 195760 234000 197850 250980 210390 224090 201190 232250 214780 257270 260130 160590 134380 162010 178320 177780 197020 208370 200110 237340 200310 255290 212900 230030 208590 237300 218210 245930 246580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181790000 2239 240 2128 4119 3397 3397 1 9606 Homo sapiens 0.08620463834449765 AQVMEVK Oxidation (M) 819.41604 0.41603916 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 1 0 5 0 1 37.898 37.99 2 0.059279 8705 20230619_1885_Aki_TMTPro18x_K_F5 73.665 21.262 22820 15538 30753 25351 33964 31608 30676 31323 32632 31455 37972 41287 37813 27433 34039 21261 42651 43413 21139 14312 30587 24878 34865 31481 31201 32019 33345 32069 38722 40950 38387 28482 35080 22744 40730 40996 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11243000 2240 817 2129 4120 3398 3398 482 1 9606 Homo sapiens -0.0008922179134742692 AQVQLDSDHLEEDIHR Unmodified 1903.9024 0.90241781 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 0 1.5 0.5 1 1 43.951 43.993 4 5.0338E-11 11856 20230619_1880_Aki_TMTPro18x_K_F1 157.03 122.11 75802 60481 69906 74453 75520 88657 74738 81203 96416 64072 70181 74896 66219 59494 80028 64637 82528 74664 70036 55494 71616 74226 78072 88381 76082 83003 95847 66057 73131 75009 68407 62143 81181 65488 78883 70839 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168890000 2241 1958 2130 4121;4122 3399;3400 3399 2 9606 Homo sapiens -0.013377306690472324 AQWDIGIAHAEK Unmodified 1337.6728 0.67279921 4473 Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes no 0 0 0 6 0 1 49.332 49.409 3 0.00012993 13661 20230619_1886_Aki_TMTPro18x_K_F6 117.7 100.27 72272 63516 89203 67665 77129 81997 89257 85758 112990 104610 98982 103270 106510 80794 87105 108990 121280 125480 66989 58179 88895 68272 81354 81953 90040 87832 113210 104680 102550 104110 107520 85657 90921 109910 115740 119000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88267000 2242 4473 2131 4123 3401 3401 1 9606 Homo sapiens 0.017469719664632066 AQYEEIAQR Unmodified 1106.5356 0.53563702 2787 CON__P35908v2;CON__P35908;P35908;B4DRY0;B4DRW1;B4DRR7;B4DKJ0;P19013;CON__P19013 KRT2;KRT4 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 4 no no 0 0 0 2.5 0.5 1 1 39.369 39.429 2 0.00012547 9368 20230619_1882_Aki_TMTPro18x_K_F3 151.48 110.03 + 39036 40142 65460 102870 1360100 108440 35812 76882 157800 41699 71362 74859 68344 483620 86637 52245 84568 73931 36355 37199 81762 98576 1264100 112350 116550 79750 152000 45917 77191 88284 73646 460630 87462 61134 80860 70029 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 95758000 2243 2787 2132 4124;4125 3402;3403 3403 2 9606 Homo sapiens -0.013369369130941777 AQYESLAAK Unmodified 979.49746 0.4974606 3949 Q16352;Q59EM6 INA Alpha-internexin yes no 0 0 0 5.8 0.748 2 2 1 44.244 44.329 2;3 5.8612E-05 11336 20230619_1885_Aki_TMTPro18x_K_F5 179.51 0 239060 148500 216030 225670 216900 217950 212700 237050 305510 257300 305310 300380 297080 273640 319150 226300 367630 309880 220540 136720 221370 221420 225190 221390 217690 241370 305770 260360 312900 301960 304700 280670 326260 233200 350880 293650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2220900000 2244 3949 2133 4126;4127;4128;4129;4130 3404;3405;3406 3404 3 9606 Homo sapiens 0.006891771722280282 AQYPIADLVK Unmodified 1116.6179 0.61791009 87 Q2TB59;A0A024R0C3;Q13423;E9PCX7;A0A590UK15;Q8N5H5;B4DS88;B4DMN9 NNT NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 7.5 0.5 1 1 57.752 57.804 3 0.0030269 16903 20230619_1888_Aki_TMTPro18x_K_F8 77.062 50.464 107830 93836 116790 116380 114520 138300 138970 138320 152090 81724 73339 65897 87395 73657 103200 81188 80744 64580 99816 86077 117890 115990 119850 138130 139060 139780 150850 85280 79589 67964 89512 76116 103290 80627 77360 61574 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55697000 2245 87 2134 4131;4132 3407;3408 3407 2 9606 Homo sapiens 0.06426585165854704 AQYYLPDGSTIEIGPSR Unmodified 1865.9159 0.9159426 1483 A0A384NQ21;P61163;R4GMT0;B4DM97;B4DXP9;B4DMT4 ACTR1A Alpha-centractin yes no 0 0 0 6.5 0.5 1 1 59.549 59.603 3 6.3242E-11 17605 20230619_1887_Aki_TMTPro18x_K_F7 145.33 110.72 90108 74439 86494 100660 82841 103290 99064 97732 108200 100530 100310 96598 121380 101590 95736 119900 115310 113160 83298 68359 88214 99495 86871 104070 99232 100320 109410 101370 104180 98473 122000 105610 99013 119750 110130 107560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 309440000 2246 1483 2135 4133;4134 3409;3410 3410 2 9606 Homo sapiens 0.017621271101916136 ARAEEAAGQLR Unmodified 1170.6105 0.6105333 4006 Q53RX3;Q9HBH5 RDH14 Retinol dehydrogenase 14 yes no 0 0 1 4.5 0.5 1 1 31.698 31.768 3 0.00025129 6222 20230619_1883_Aki_TMTPro18x_K_F4 112.5 77.084 46696 34623 48518 48586 54904 53469 54912 58109 65772 56735 70073 63582 64888 53697 58850 67119 78519 72222 43167 31822 49223 47985 56474 53809 55719 58994 66516 57626 71412 63952 66112 56438 61077 67491 74893 68565 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42815000 2247 4006 2136 4135;4136 3411 3411 1 9606 Homo sapiens 0.03205245618119079 ARAETEELIR Unmodified 1186.6306 0.63060004 3077 P29590;P29590-3;Q9BZY1;H3BT57;Q59H09;Q15156;P29590-13;P29590-11;P29590-8;P29590-2;P29590-9;P29590-5;P29590-12;P29590-4;P29590-10;P29590-14;Q59GQ8;H3BUJ5;H3BT29 PML;PML-RAR Protein PML yes no 0 0 1 2.5 0.5 1 1 36.155 36.211 3 0.0046467 8064 20230619_1882_Aki_TMTPro18x_K_F3 73.781 31.445 36424 28383 34671 36228 39429 41892 43808 42782 55726 40961 42374 45534 48482 41600 43750 46893 51736 45493 33657 26055 35449 36019 40703 41952 44266 43596 55524 41665 44393 45884 49080 43313 45025 46957 49381 43247 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56475000 2248 3077 2137 4137;4138 3412 3412 1 9606 Homo sapiens 0.04474996558087696 ARDACIIEK Unmodified 1074.5492 0.5491786 3092 H7C4E5;Q14061 COX17 Cytochrome c oxidase copper chaperone yes no 0 0 1 6 0 1 39.281 39.369 3 0.0040633 9281 20230619_1886_Aki_TMTPro18x_K_F6 72.817 7.4697 126160 116040 118990 93866 125290 108380 104690 125640 136880 118980 126850 117690 133730 110030 111340 168030 166120 128460 116690 106050 121340 97026 128930 109080 107860 126890 137220 120570 130830 119450 135260 116770 116940 165530 158150 122570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64504000 2249 3092 2138 4139 3413 3413 1 9606 Homo sapiens 0.014885975944935126 ARDDLITDLLNEAK Unmodified 1585.8312 0.83115034 3556 Q53Y06;P36543;P36543-2;C9J8H1 ATP6V1E1 V-type proton ATPase subunit E 1 yes no 0 0 1 5 0 1 62.469 62.516 3 3.0443E-12 19066 20230619_1885_Aki_TMTPro18x_K_F5 190.44 147.59 1231600 1067700 1113700 1385500 935820 1023400 1245400 1227800 1185100 1513000 1475200 1757500 1659900 1414900 1587100 1818800 1690900 1935500 1138300 979930 1140100 1368200 994180 1067200 1236500 1248700 1223800 1520100 1510300 1760700 1684800 1492100 1622300 1827000 1618500 1836200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1597199999.9999998 2250 3556 2139 4140 3414 3414 1 9606 Homo sapiens 0.06166801364247476 ARDVYEEAIR Unmodified 1220.6149 0.61494998 4090 Q68CN2;Q71SV8;Q9HCS7 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 yes no 0 0 1 3 0 1 39.117 39.171 2 0.020137 9265 20230619_1882_Aki_TMTPro18x_K_F3 81.263 55.704 13910 10275 12218 13066 18120 17943 16844 17876 21618 17887 20196 24512 20360 16325 16979 18700 27870 23884 12841 9433.7 12645 13030 18315 17775 17200 18260 21687 18278 20819 24286 20621 17242 17932 19039 26533 22644 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38923000 2251 4090 2140 4141 3415 3415 1 9606 Homo sapiens 0.013467100410252897 ARDYDAMGSQTK Oxidation (M) 1357.5932 0.59322826 4699 Q9Y230;B3KNL2;Q9Y230-2;M0R0Y3 RUVBL2 RuvB-like 2 yes no 0 1 1 4.5 0.5 1 1 31.961 32.032 3 0.0026561 6307 20230619_1883_Aki_TMTPro18x_K_F4 82.437 65.184 52695 39099 47796 47498 72353 59601 55361 62245 65112 60218 74786 72707 68375 54408 74293 64464 80700 78038 48660 35881 49297 47453 72620 59464 57132 63320 66158 61332 75996 72637 70244 57290 75738 65409 77133 73987 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75405000 2252 4699 2141 4142;4143 3416;3417 3416 2863 2 9606 Homo sapiens -0.07126462769838326 ARDYDAMGSQTK Unmodified 1341.5983 0.59831364 4699 Q9Y230;B3KNL2;Q9Y230-2;M0R0Y3 RUVBL2 RuvB-like 2 yes no 0 0 1 5.5 0.5 1 1 36.598 36.678 3 6.488E-06 8159 20230619_1885_Aki_TMTPro18x_K_F5 129.37 114.95 106950 79225 131760 119010 173330 137750 138030 171590 142280 121690 192620 203040 138210 145730 195020 114620 205060 171950 99027 72874 132260 117200 175290 138720 141520 171530 146540 128040 193050 200420 145660 150450 197400 119190 195870 162830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123920000 2253 4699 2141 4144;4145 3418 3418 1 9606 Homo sapiens -0.058821589072294955 AREESWGPPR Unmodified 1183.5734 0.57341951 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 4.5 0.5 1 1 34.445 34.514 3 0.00028566 7309 20230619_1883_Aki_TMTPro18x_K_F4 113.93 96.901 88717 66701 90921 92311 104460 106380 104330 105170 107820 104280 116810 112980 111440 94528 120250 91538 113670 91681 82009 61292 92381 91296 107330 106480 105340 107500 110000 105690 119200 113650 114300 97952 121590 92165 108670 87158 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 251370000 2254 3152 2142 4146;4147 3419;3420 3419 2 9606 Homo sapiens -0.011024259276382509 AREHFGTVK Unmodified 1043.5512 0.55122751 2916 E9PGT1;Q15631;B3KRM8;H7C1D4;B7Z5D9;Q53GR3;Q15631-2 TSN Translin yes no 0 0 1 5.33 3.09 1 1 1 32.199 32.231 4 0.0019946 6873 20230619_1880_Aki_TMTPro18x_K_F1 102.06 65.537 444730 331330 397630 404450 559800 644270 474720 489310 678430 355430 414820 343860 361690 302860 366420 445040 517380 326310 410640 304070 410340 405470 567080 629580 489640 506790 668050 366850 435170 348880 371380 321110 381210 438090 492240 311890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 322210000 2255 2916 2143 4148;4149;4150 3421;3422 3421 2 9606 Homo sapiens 0.031193943946163927 ARENIPTDR Unmodified 1070.5469 0.54687041 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 1 3.5 0.5 1 1 27.924 28.016 3 0.0044918 4903 20230619_1883_Aki_TMTPro18x_K_F4 82.029 35.567 37866 27055 33955 38237 49538 52925 43565 48104 58812 31559 45953 42031 41022 38936 40780 24555 48798 47752 34956 24872 35077 37870 50085 52276 44734 49015 58429 33157 47508 42092 42051 39520 41820 26262 46605 45113 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28858000 2256 3337 2144 4151;4152 3423 3423 1 9606 Homo sapiens 0.014418851810205524 ARENPSEEAQNLVEFTDEEGYGR Unmodified 2639.1736 0.17356687 2066 B3KY12;A8K7V1;A8K566;Q12874;Q53HM6;B4DW90 SF3A3 Splicing factor 3A subunit 3 yes no 0 0 1 1.5 0.5 1 1 54.182 54.194 3 1.6478E-44 16044 20230619_1880_Aki_TMTPro18x_K_F1 239.57 232.38 83266 64466 74261 81407 73649 87687 89348 84292 85847 99534 96559 100060 102110 86699 90340 112130 104090 115950 76899 59172 76235 80898 77013 88099 89077 86771 88157 99759 98838 101110 103480 91231 92956 112420 99544 110050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 335080000 2257 2066 2145 4153;4154 3424;3425 3424 2 9606 Homo sapiens -0.08045297335911528 AREQAEAEVASLNR Unmodified 1542.775 0.77503245 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;D6R904;A0A494C0G0;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4 TPM3;DKFZp686J1372 Tropomyosin alpha-3 chain no no 0 0 1 3.5 0.5 1 1 39.782 39.832 3 6.018599999999999E-22 9529 20230619_1882_Aki_TMTPro18x_K_F3 176.98 142.18 194010 174500 173180 227330 211460 229980 235500 208260 259900 230960 257740 217710 256740 191920 192330 258120 243520 233580 179350 160130 178580 225150 217280 231860 236690 215000 263190 231890 264130 220960 258850 202430 199900 256750 232430 222150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 908370000 2258 1095;1096 2146 4155;4156 3426 3426 1 9606 Homo sapiens 0.02535593247421275 AREQAEAEVASLNRR Unmodified 1698.8761 0.87614348 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;D6R904;A0A494C0G0;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4 TPM3;DKFZp686J1372 Tropomyosin alpha-3 chain no no 0 0 2 5.5 0.5 1 1 37.465 37.55 4 1.1971E-13 8519 20230619_1886_Aki_TMTPro18x_K_F6 171.46 109.82 106240 91354 104800 99786 129690 102540 107050 107540 121150 119120 110280 97754 123240 87894 106450 122210 127170 94624 98261 83704 106860 100190 131830 103750 109710 109820 122300 119110 114140 99931 124480 92861 109760 120680 121250 90286 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 214860000 2259 1095;1096 2147 4157;4158 3427;3428 3428 2 9606 Homo sapiens 0.05466044950117066 AREQLAAVR Unmodified 1012.5778 0.57777661 318 B4E0P8;A0A087WTZ5;E9PJ81;E9PRQ7;A0A024R598;A0A024R539;Q04323;Q04323-2 UBXN1;LOC51035 UBX domain-containing protein 1 yes no 0 0 1 7.5 0.5 1 1 30.926 30.98 3 3.2927E-05 6004 20230619_1888_Aki_TMTPro18x_K_F8 142.43 88.27 117300 109030 107380 98433 182140 183680 133140 150600 207320 21152 28936 30080 27983 22909 52535 26824 32154 28055 108480 99716 110950 101480 182000 178580 139250 152560 199330 28965 38089 30013 29829 24072 51719 27047 30933 26648 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45568000 2260 318 2148 4159;4160 3429;3430 3430 2 9606 Homo sapiens 0.07199083285945562 ARFEELCSDLFR Unmodified 1541.7297 0.72966216 1031;1463 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNV4;Q53FC7;B3KSM6;B2R6X5;A0A384NKX5;P17066;B4DHP5;P48741 HSPA1A;HSPA1B;HEL-S-103;HSPA6;HSPA7 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 0 0 1 6 0.816 1 1 1 56.061 56.126 3 6.0009E-13 16482 20230619_1886_Aki_TMTPro18x_K_F6 196.11 164.05 303500 269320 294020 377240 362010 449160 432460 446410 455080 415820 358950 342670 457120 356160 389250 515920 453960 433830 280710 247350 301160 372830 372860 448380 432490 455260 458650 419740 377030 352040 460110 375510 401270 510890 433580 412990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 752270000 2261 1031;1463 2149 4161;4162;4163 3431;3432 3431 2 9606 Homo sapiens -0.0195334853933673 ARFEELNADLFR Unmodified 1479.747 0.74702678 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;P11142-2;Q53HF2;B4E1Q1;A8K7Q2;E9PN89;P54652;A0A024R6B5;A0A384MDT7 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 0 0 1 6.5 0.5 1 1 54.149 54.219 3 6.7433E-18 15660 20230619_1886_Aki_TMTPro18x_K_F6 228.8 167.69 700880 602640 613830 667050 572950 688800 634420 672280 710790 737270 650900 611760 744490 642610 700700 885200 646120 693540 647620 552240 630500 668860 600760 694560 638760 689560 717950 737850 674590 628330 754790 674470 711350 874410 619050 660580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8601500000 2262 3430 2150 4164;4165 3433;3434 3433 2 9606 Homo sapiens 0.026343150579805297 ARGDSEALDEES Unmodified 1277.5372 0.53715317 4171 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;A0A087WZ99 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 0 0 1 1 0 1 33.656 33.656 2 0.018702 7430 20230619_1880_Aki_TMTPro18x_K_F1 73.885 65.022 56122 31078 60665 64442 93022 98083 68104 78112 77340 57698 95220 104540 81710 81688 88736 38996 104250 99457 51824 28760 61744 62695 93357 96107 70444 80610 78880 60862 96342 103130 84236 82764 90677 43434 99563 93842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187960000 2263 4171 2151 4166 3435 3435 1 9606 Homo sapiens -0.09051392405626757 ARGEQNIPR Unmodified 1039.5523 0.55229014 1347 A0A2R8Y4P3;A0A2R8Y840;Q9HCK8;A0A2R8Y808;Q9HCK8-2;A0A2R8YFT4 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes no 0 0 1 5.5 0.5 1 1 26.754 26.808 3 0.0054122 4606 20230619_1885_Aki_TMTPro18x_K_F5 77.677 40.984 6113.9 2569.3 6374.7 5866 6132.3 5831.2 5610.6 7873.3 6934.9 4850.8 6737.8 5804.8 6871.7 4960.9 5597.6 3380.8 6691.1 6849.3 5638.2 2385.8 6444.7 5651.1 6368.9 5941 5737.5 7814.8 6973.5 5092.5 6919.9 5822.8 6942.3 5071.4 5761.8 3624.2 6392.5 6468.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19654000 2264 1347 2152 4167;4168 3436 3436 1 9606 Homo sapiens 0.03409608763513461 ARGNEYQPSNIK Unmodified 1375.6844 0.68442653 457 M0R226;A0A024R7J4;Q9BQ48 MRPL34 Ribosomal protein L34;39S ribosomal protein L34, mitochondrial yes no 0 0 1 8 0 1 36.353 36.34 3 0.00070459 7986 20230619_1888_Aki_TMTPro18x_K_F8 93.623 60.566 21971 19317 17944 19665 31567 29032 21482 31778 29671 20944 26667 27686 27898 20767 23452 28323 28158 22870 20295 17687 18767 19968 31422 28727 22517 31943 29625 21953 27555 27587 28207 22046 24210 28024 26859 21800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24485000 2265 457 2153 4169 3437 3437 1 9606 Homo sapiens 0.011611689898018085 ARGPGGSPGGLQK Unmodified 1180.6313 0.63126874 3157 K7EJB8;K7EMN0;Q96A00-2;Q96A00 PPP1R14A Protein phosphatase 1 regulatory subunit 14A yes no 0 0 1 3 0 1 34.654 34.715 3 0.061193 7452 20230619_1882_Aki_TMTPro18x_K_F3 53.034 14.796 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2266 3157 2154 4170 3438 3438 1 9606 Homo sapiens 0.04817835997801012 ARHPQLLYESK Unmodified 1340.7201 0.72008375 1563 P48729-2;P48729;U3KPX3;A0A590UJ43;V9HW00;P48729-3;A0A5F9W493;Q6PJ06;Q05DL3;A0A590UK94;E5RG27;D6RGE5;A0A590UJQ7 CSNK1A1;HEL-S-77p Casein kinase I isoform alpha yes no 0 0 1 2 0 1 36.928 36.989 4 0.0011399 8492 20230619_1881_Aki_TMTPro18x_K_F2 96.015 64.172 102550 63837 89770 100680 107760 108740 105400 107510 125470 78348 87310 72295 80398 63429 85766 89791 92636 66226 94585 58802 92575 98703 110420 109290 107010 109140 125010 80642 90991 73489 82526 67104 87511 88488 88384 63249 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52876000 2267 1563 2155 4171 3439;3440 3440 2 9606 Homo sapiens 0.06335251237442208 ARLEALK Unmodified 799.49159 0.49158736 1234 Q2TU84;A0A140VK69;P17174;P17174-2;B7Z1I2 GIG18;GOT1 Aspartate aminotransferase;Aspartate aminotransferase, cytoplasmic yes no 0 0 1 1 0 1 40.754 40.754 3 0.086433 10392 20230619_1880_Aki_TMTPro18x_K_F1 53.968 2.1807 115170 95886 104930 101200 103200 105780 108450 111390 127410 75044 84934 73932 69170 61784 99777 81245 95750 60232 106430 87839 107380 101910 107460 106800 109640 112440 126840 77833 88442 74788 72599 65111 100580 80231 91406 57561 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32910000 2268 1234 2156 4172 3441 3441 1 9606 Homo sapiens 0.08382123451224288 ARLEIEPEWAYGK Unmodified 1560.7936 0.79364262 3774 Q00688;Q53GD8 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3;Peptidyl-prolyl cis-trans isomerase yes no 0 0 1 6.5 0.5 1 1 54.287 54.358 3 6.0088E-06 15715 20230619_1886_Aki_TMTPro18x_K_F6 128.35 115.22 524640 424620 514480 498430 417950 453040 450520 567420 530490 601510 599520 630290 638950 593200 603550 712860 591010 720280 485010 389400 521820 497060 442720 464300 455520 572370 539100 606640 613840 637390 649440 619240 614330 714540 566490 683580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1310100000 2269 3774 2157 4173;4174 3442;3443 3442 2 9606 Homo sapiens 0.03567754889286334 ARLPQPEGCPSK Unmodified 1338.6714 0.671419 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-3;Q9NSQ6;H0Y8F1;B3KP36 PTK7;DKFZp434L0319 Inactive tyrosine-protein kinase 7 yes no 0 0 1 8 0 1 38.613 38.6 3 0.00011374 8877 20230619_1888_Aki_TMTPro18x_K_F8 113.25 91.207 44175 40275 44457 43236 50139 50788 49582 54645 67593 62107 66784 84964 74853 66846 61927 82515 90915 84723 40878 36889 45209 43552 51608 50900 50595 55742 67808 63061 69019 84561 75585 70345 64908 82732 86664 80469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43417000 2270 3847 2158 4175 3444 3444 1 9606 Homo sapiens 0.015630146060402694 ARNPNELSVSANQK Unmodified 1526.7801 0.78011783 1262 B3KY33;A0A1C7CYY6;A0A1B0GTX1;Q6XZF7-2;Q6XZF7;B4E0Q3 DNMBP Dynamin-binding protein yes no 0 0 1 8 0 1 36.839 36.824 3 5.001E-05 8216 20230619_1888_Aki_TMTPro18x_K_F8 105.58 100.29 43601 27423 39460 37750 42391 39524 35129 46077 46244 47686 58711 55422 53195 50579 52437 59002 71447 58242 40227 25217 40442 37310 43581 39994 36242 46628 46978 48328 59384 55785 54485 52747 54414 59100 68085 55375 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17686000 2271 1262 2159 4176 3445;3446 3445 2 9606 Homo sapiens 0.03779897110052843 ARPAEVGGMQLR Unmodified 1283.6768 0.67683873 3541 P33316-2;H0YNW5;P33316;H0YKC5;H0YNJ9;H0YMM5;H0YKI0 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes no 0 0 1 4.5 3.5 1 1 37.43 37.423 3 9.5018E-10 8936 20230619_1880_Aki_TMTPro18x_K_F1 154.85 123.21 273410 210480 230270 245690 185040 243270 229140 215350 256300 284970 282210 249280 308010 244130 233300 330510 285400 256520 252390 193050 236940 245220 197410 245510 229410 223880 260760 283200 289140 254710 309890 256570 241960 326330 272360 244530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 458280000 2272 3541 2160 4177;4178 3447;3448 3447 2 9606 Homo sapiens 0.04634738188519805 ARPAEVGGMQLR Oxidation (M) 1299.6718 0.67175335 3541 P33316-2;H0YNW5;P33316;H0YKC5;H0YNJ9;H0YMM5;H0YKI0 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes no 0 1 1 7 0.816 1 1 1 31.777 31.821 3 0.00032036 6021 20230619_1887_Aki_TMTPro18x_K_F7 99.669 76.433 127810 97972 111480 120490 112600 113320 119750 114630 122290 132540 144820 122680 129020 102880 118450 144770 132440 117180 118010 89907 114660 119750 117000 115210 120450 117530 125370 132650 146680 124430 131630 108990 121550 143190 126480 111650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 565590000 2273 3541 2160 4179;4180;4181 3449;3450 3449 2202 2 9606 Homo sapiens 0.03390434325910974 ARPATDSFDDYPPR Unmodified 1606.7376 0.73758431 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;F8VP89;F8VSC7;F8W0K0 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 1 3.75 0.433 1 3 39.827 39.874 3 4.2688E-05 9157 20230619_1883_Aki_TMTPro18x_K_F4 89.136 85.642 133540 104700 127510 152820 150620 160660 152910 155190 181310 171480 185380 199280 193560 174760 167260 184820 206410 196490 123400 96249 130530 150390 154690 161710 154930 159380 183260 173300 190440 200150 196140 181560 172790 186190 197040 186540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 250390000 2274 2578 2161 4182;4183;4184;4185 3451;3452;3453;3454 3453 4 9606 Homo sapiens -0.04151498018200073 ARPEDVISEGR Unmodified 1227.6208 0.62076364 1209 A0A140VJX3;P25325;P25325-2 MPST 3-mercaptopyruvate sulfurtransferase yes no 0 0 1 2.5 0.5 1 1 36.506 36.562 3 8.5951E-09 8308 20230619_1881_Aki_TMTPro18x_K_F2 159.44 128.01 224390 181410 198890 196380 274710 271290 220930 230280 284230 306080 320170 321860 323590 272640 293130 345860 359210 325180 207280 166240 205220 198140 277830 267870 227890 240000 287630 305760 326930 324370 328740 286700 302530 345090 342810 309200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 573230000 2275 1209 2162 4186;4187 3455;3456 3455 2 9606 Homo sapiens 0.016058085526992727 ARPEYMLPVHFYGR Oxidation (M) 1750.8613 0.86134503 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 1 1 4 0 1 46.298 46.341 4 0.056868 12298 20230619_1883_Aki_TMTPro18x_K_F4 64.244 50.338 50237 38341 45490 53599 58871 54423 62921 57765 69348 59872 60276 55695 61537 53242 49655 73162 75252 64852 46397 35234 46851 52870 60124 55063 63372 58853 69908 60289 62284 56700 62244 56043 52241 72662 71681 61723 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92096000 2276 3432 2163 4188 3457 3457 2058 1 9606 Homo sapiens 0.015948815484080114 ARPEYMLPVHFYGR Unmodified 1734.8664 0.86643041 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 1 4.5 0.5 1 1 49.176 49.233 4 1.17E-06 13427 20230619_1885_Aki_TMTPro18x_K_F5 114.74 96.378 55781 49757 50194 53957 51246 58890 58029 63529 74653 67813 71992 83835 74247 71189 86983 65123 86019 85262 51566 45581 51496 54238 53386 59293 58643 64680 74987 68795 74203 83878 76366 73514 88047 66748 82306 80771 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 244210000 2277 3432 2163 4189;4190 3458 3458 1 9606 Homo sapiens 0.028391854110168424 ARPFFNEFQGADSEIK Unmodified 1854.8901 0.89006221 867 A0A087WZ85;A0A0A0MSX4;Q1RMC8;Q2M1J3;Q9Y6N7-6;Q9Y6N7-5;Q9Y6N7-4;Q9Y6N7-3;Q9Y6N7;Q9Y6N7-2;B7Z687 ROBO1 Roundabout homolog 1 yes no 0 0 1 7 0 1 54.17 54.234 3 3.6693E-08 15433 20230619_1887_Aki_TMTPro18x_K_F7 133.71 102.32 46054 39073 41420 47077 44980 55232 48591 46033 57284 65391 54001 57646 67942 49620 52659 72520 61186 61949 42559 35836 42557 46982 46603 55015 49046 48180 57818 64809 56183 58589 68126 52690 54397 71854 58465 58949 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35031000 2278 867 2164 4191 3459 3459 1 9606 Homo sapiens -0.0031872234144429967 ARPFPDGLAEDIDKGEVSAR Unmodified 2142.0705 0.070545766 3447 P13639;Q8TA90;B4DPU3;Q6W6M8 EEF2 Elongation factor 2 yes no 0 0 2 4.75 0.829 2 1 1 50.778 50.84 3;4 2.5511E-13 14276 20230619_1883_Aki_TMTPro18x_K_F4 142.23 127.98 3528400 2882800 3190600 3215600 2631700 3297400 3030700 3240300 3405500 4602900 3943100 4056200 4211500 3439700 3859900 4535900 3786300 3787100 3260000 2642400 3261000 3222600 2792900 3327100 3046900 3349700 3476200 4559600 4032900 4120000 4271400 3626500 3931000 4497100 3623400 3605000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6760399999.999999 2279 3447 2165 4192;4193;4194;4195 3460;3461 3460 2 9606 Homo sapiens 0.04519331524716108 ARPFQALPR Unmodified 1054.6036 0.60359743 1870 C9JSD5;A0A994J4Y2;Q8WYQ5-2;Q8WYQ5-3;Q8WYQ5 DGCR8 Microprocessor complex subunit DGCR8 yes no 0 0 1 6 0 1 38.029 38.105 3 0.0029501 8762 20230619_1886_Aki_TMTPro18x_K_F6 76.827 42.106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2280 1870 2166 4196 3462 3462 1 9606 Homo sapiens 0.0784797752819486 ARPNTVISQEPFVPK Unmodified 1681.9152 0.91515474 4088 Q643R0;Q9ULW0;Q9ULW0-2;B3KM90;Q96FC3 HCTP4;TPX2 Targeting protein for Xklp2 yes no 0 0 1 2 0 1 47.904 47.974 3 0.00051413 13495 20230619_1881_Aki_TMTPro18x_K_F2 88.706 72.307 118590 94688 99445 121180 101190 121150 116690 105000 141680 140060 155360 146100 171500 130240 118460 176050 170410 148010 109500 86915 102780 120150 105540 122120 117510 109400 143460 139890 159320 147610 171940 137310 124560 174440 162390 140960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234360000 2281 4088 2167 4197 3463 3463 1 9606 Homo sapiens 0.10147377251769285 ARPSQFPEQSSSAQQNAR Unmodified 1987.946 0.94601395 1621 B0AZS5;A0A6Q8PFA6;A0A6Q8PH57;O00139-2 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 1 7.5 0.5 1 1 31.849 31.898 3 3.6601E-30 6057 20230619_1887_Aki_TMTPro18x_K_F7 225.01 216.07 11659 10683 14646 14818 15364 13067 12462 12616 16976 17346 17040 17348 14528 15388 16417 17821 19475 16985 10812 9809.3 14633 14600 15793 13346 12882 13051 17050 17278 17375 17540 15022 16051 16837 17821 18587 16151 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53573000 2282 1621 2168 4198;4199 3464;3465 3464 2 9606 Homo sapiens -0.008441211718945851 ARQEELYSELQAR Unmodified 1591.7954 0.79543354 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0 PLEC;PLEC1 Plectin yes no 0 0 1 4 0 1 42.858 42.902 3 0.0015833 10822 20230619_1883_Aki_TMTPro18x_K_F4 83.169 65.802 69821 57848 67213 69218 77953 80521 85176 83255 98856 70904 67252 68803 73243 59666 76325 85238 91049 72740 64547 53056 68670 69136 80285 80642 85849 84527 98611 72301 70786 69676 74733 63196 78411 84520 86846 69288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124380000 2283 3921 2169 4200 3466 3466 1 9606 Homo sapiens 0.023207639072325037 ARQEFEER Unmodified 1063.5047 0.50467125 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;Q6MZR8;A8K7A6;Q68EN4 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 1 1.5 0.5 1 1 28.639 28.676 3 0.00025659 5495 20230619_1880_Aki_TMTPro18x_K_F1 158.76 107.69 125180 82985 111660 120810 132500 129100 120440 129260 156380 131290 162670 155400 160700 126170 133280 122230 186020 142770 115510 76342 114890 118970 135620 129930 123290 132090 157430 133340 166420 155660 162740 130970 138840 124100 177180 135550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 215500000 2284 1432 2170 4201;4202 3467;3468 3467 2 9606 Homo sapiens -0.02454090227342931 ARQELQEAK Unmodified 1071.5673 0.5672715 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 5 0 1 34.116 34.201 3 0.0015542 7245 20230619_1885_Aki_TMTPro18x_K_F5 98.254 71.812 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2285 349;3906 2171 4203 3469 3469 1 9606 Homo sapiens 0.034350558408505094 ARQEQLELTLGR Unmodified 1412.7736 0.77357588 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;A0A669KB06 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 1 6.5 0.5 1 1 42.711 42.796 3 0.00018224 10706 20230619_1886_Aki_TMTPro18x_K_F6 97.276 74.184 52270 48983 53798 58748 59511 61637 71172 65910 77843 65223 68328 65369 68824 59188 69928 70033 67918 63032 48388 44906 54647 58576 61630 62221 71262 67034 78504 65978 70571 66168 70283 61818 70976 69822 64969 59961 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65114000 2286 1566 2172 4204;4205 3470 3470 1 9606 Homo sapiens 0.08370003949312377 ARRPESALLGGSEAGER Unmodified 1754.9024 0.90235823 3237 O15240;Q05BJ3 VGF Neurosecretory protein VGF;Neuroendocrine regulatory peptide-1;Neuroendocrine regulatory peptide-2;Antimicrobial peptide VGF[554-577] yes no 0 0 2 6 0 1 33.448 33.489 4 2.9886E-13 7079 20230619_1886_Aki_TMTPro18x_K_F6 154.39 126.74 9754.5 9709.3 11401 11496 9824 9060.2 11651 9336.4 10937 13526 13865 11586 15367 11251 10783 12928 14044 13757 9044.5 8898.4 11419 11435 10354 9362.6 11622 9642 11311 13383 14133 11843 15406 11719 11236 13005 13404 13059 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15604000 2287 3237 2173 4206 3471 3471 1 9606 Homo sapiens 0.05510314121602278 ARSDEGQLSPATR Unmodified 1386.6852 0.68515481 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1 PLEC Plectin yes no 0 0 1 4 0 1 29.839 29.906 3 0.0025249 5551 20230619_1883_Aki_TMTPro18x_K_F4 76.759 50.777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2288 3921 2174 4207 3472 3472 1 9606 Homo sapiens 0.007279636388375366 ARSEPEDPVTER Unmodified 1384.6583 0.65827136 1734 Q9BT22;A0A804HJL6;A0A804HKX7;A0A804HKK4;Q9BT22-2;A0A804HLB7;A0A804HJQ1;A0A804HIG6;A0A804HKU4;K7EID2;A0A804HKJ4 ALG1 Chitobiosyldiphosphodolichol beta-mannosyltransferase yes no 0 0 1 1 0 1 30.906 30.906 3 4.5053E-06 6311 20230619_1880_Aki_TMTPro18x_K_F1 124.45 102.9 17714 19876 20743 19265 21053 27878 20867 27753 31518 25199 28294 34558 27633 26355 28408 31374 36047 35515 16441 18178 20820 19638 21888 27529 21399 28265 31356 25892 29196 34367 28293 27707 29311 31671 34412 33690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17192000 2289 1734 2175 4208 3473 3473 1 9606 Homo sapiens -0.018671449723342448 ARVEELDRK Unmodified 1114.6095 0.60947067 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 2 5 0.816 1 1 1 34.542 34.603 4 0.0061109 7459 20230619_1886_Aki_TMTPro18x_K_F6 81.017 41.392 332500 277130 299120 314030 379270 355030 353600 369420 416480 387520 451190 417370 434150 373230 376280 439950 494800 404770 307240 254030 307840 314770 386570 356470 360030 376800 422030 391610 460230 421090 441020 389880 390500 438930 471650 385150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 392700000 2290 4191 2176 4209;4210;4211 3474;3475 3475 2 9606 Homo sapiens 0.05675031249234053 ARVEENFLK Unmodified 1104.5928 0.59275797 4319 Q96A33;Q96A33-2;J3QR89 CCDC47 Coiled-coil domain-containing protein 47 yes no 0 0 1 7 0 1 44.41 44.492 3 0.00063511 11107 20230619_1887_Aki_TMTPro18x_K_F7 102.52 36.089 271750 234620 254220 291780 316410 334410 333450 324660 399640 322270 301030 275070 331520 270740 303810 359660 330770 301690 251230 215230 260890 290490 324180 334730 337110 332250 399360 324590 314670 281470 336070 284140 311210 356600 316020 287270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199680000 2291 4319 2177 4212 3476 3476 1 9606 Homo sapiens 0.04464530363270569 ARVEVERDNLAEDIMR Unmodified 1914.9582 0.95815855 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8 VIM;HEL113 Vimentin yes no 0 0 2 3.5 0.5 1 1 45.527 45.587 4 4.761099999999999E-19 11980 20230619_1883_Aki_TMTPro18x_K_F4 202.03 159.38 339330 321450 297170 285810 429630 506130 373030 428620 532390 456450 434600 506730 603710 513530 398350 717210 719080 669340 313760 293950 307350 294710 434930 493410 384290 443520 529630 461670 458130 512700 601500 540170 428110 713730 684560 636430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1505799999.9999998 2292 3414 2178 4213;4214 3477;3478 3478 2 9606 Homo sapiens 0.037277792469467386 ASAAFSSVGSVITK Unmodified 1323.7034 0.70343063 3659 P55327-2;P55327-4;P55327;P55327-7;P55327-5;P55327-6;P55327-3;H0YC42;A5Y5A3 TPD52 Tumor protein D52 yes no 0 0 0 3 0 1 56.387 56.423 2 3.3956E-12 16947 20230619_1882_Aki_TMTPro18x_K_F3 226.73 170.17 78703 68101 80957 73569 23082 25112 28154 29315 29417 68593 63030 68292 76619 57352 58545 80650 69941 84393 72818 62390 81085 73281 28695 29240 28304 30803 31409 67127 63700 68945 76844 60801 60607 80803 66909 80064 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29562000 2293 3659 2179 4215 3479 3479 1 9606 Homo sapiens 0.05452705560855975 ASAAGAECELAR Unmodified 1204.5506 0.55063516 529 A0A024R8N4;Q9C0B0;K7EQ93 hCG_1776081;UNK RING finger protein unkempt homolog yes no 0 0 0 2 0 1 37.894 37.958 2 4.1021E-09 8882 20230619_1881_Aki_TMTPro18x_K_F2 170.89 139.52 39745 30550 36927 39763 41650 45281 47672 44478 53747 47298 51565 52721 56745 43900 46494 51775 57897 58762 36715 28051 37839 39468 43052 45348 47891 45578 54306 47825 53235 52976 57243 46021 48116 52277 55291 55736 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46625000 2294 529 2180 4216 3480 3480 1 9606 Homo sapiens -0.043458131074203266 ASADLMSYCEEHAR Unmodified 1638.6766 0.67664031 4653 Q9UBI6;Q53GD1 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12;Guanine nucleotide-binding protein subunit gamma yes no 0 0 0 3 0.816 1 1 1 42.64 42.703 3 5.9201E-12 10794 20230619_1882_Aki_TMTPro18x_K_F3 184.11 149.1 182680 128110 186820 192050 200000 198550 203080 189870 272210 217360 241290 224830 223170 192260 226330 219740 229510 248870 168800 117860 189630 188720 206710 200090 206680 195380 271970 218560 248120 226840 228510 200900 230240 222030 219700 236000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259290000 2295 4653 2181 4217;4218;4219 3481;3482 3482 2 9606 Homo sapiens -0.11715094384294389 ASADLMSYCEEHAR Oxidation (M) 1654.6716 0.67155493 4653 Q9UBI6;Q53GD1 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12;Guanine nucleotide-binding protein subunit gamma yes no 0 1 0 3 0 1 37.952 38.005 3 2.9082E-09 8764 20230619_1882_Aki_TMTPro18x_K_F3 164.13 151.36 24657 16317 19379 24057 23395 25267 23987 26436 23710 31652 29599 35771 38122 28331 30495 30797 40428 39087 22732 15013 20213 23663 24003 25478 24155 27060 24457 31809 30504 35839 38253 29631 31690 31372 38576 37042 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33783000 2296 4653 2181 4220 3483 3483 2845 1 9606 Homo sapiens -0.12959398246925957 ASAEGPLLGPEAAPSGEGAGSK Unmodified 1951.9487 0.9486993 4416 Q9BRJ6;C9JQV0 C7orf50 Uncharacterized protein C7orf50 yes no 0 0 0 3.5 0.5 1 1 49.868 49.923 3 1.8793E-08 13970 20230619_1883_Aki_TMTPro18x_K_F4 110.75 94.063 55487 38684 44039 50091 50039 58090 47769 48698 63492 78618 78954 77999 79609 72074 61883 84447 78943 79853 51172 35532 45812 49737 51523 57915 48801 51190 64485 77825 80270 78999 80421 75171 64306 84344 75373 75890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 200200000 2297 4416 2182 4221;4222 3484;3485 3485 2 9606 Homo sapiens 0.01080289442393223 ASAELIEEEVAK Unmodified 1287.6558 0.65581174 1641 P12081;P12081-4;E7ETE2;A0A6Q8PHA5;A0A6Q8PFF2;Q52NV4;P12081-2;P12081-3;A0A6Q8PF47;A0A6Q8PHE3;B4DDD8;B4E1C5;B4DEA2;A0A6Q8PFG9;A0A6Q8PFN6;A0A6Q8PHQ0;D6RF05;A0A2R8YCI2;A0A2R8YFR1 HARS;HRS Histidine--tRNA ligase, cytoplasmic yes no 0 0 0 1.5 0.5 1 1 55.895 55.904 3 4.3255E-07 16948 20230619_1881_Aki_TMTPro18x_K_F2 153.95 121.94 150190 122470 145960 168080 149320 183700 188130 182280 189440 201750 199290 185450 207140 180480 194820 230710 202130 215620 138840 112490 148860 166140 155990 184450 187460 186830 193390 202340 204290 188960 210600 188970 198930 230090 193420 204900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 193750000 2298 1641 2183 4223;4224 3486;3487 3487 2 9606 Homo sapiens 0.023490065700116247 ASAETVDPASLWEY Unmodified 1537.6937 0.69365381 1426 A0A384MEG1;Q16658;B3KTA3;B3KTM9 FSCN1 Fascin yes no 0 0 0 3 1.41 1 1 1 1 1 64.69 64.709 2 4.6434E-09 20662 20230619_1881_Aki_TMTPro18x_K_F2 167.97 154.3 262300 242860 271120 251360 218040 263870 277120 285300 263140 375270 351630 357330 382960 346850 350340 379560 360510 396350 242810 222360 273790 253560 232320 266450 275780 292310 272910 373660 358060 363100 388390 359830 357560 381790 345080 376140 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1449600000 2299 1426 2184 4225;4226;4227;4228;4229 3488;3489;3490;3491;3492 3489 5 9606 Homo sapiens -0.05368527235168585 ASAFALQEQPVVNAVIDDTTK Unmodified 2216.1325 0.13247732 390 A0A024R6C9;P36957;Q6IBS5;P36957-2;Q86TQ8;Q86TW7 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes no 0 0 0 6 0 1 63.162 63.21 3 6.5903E-09 19581 20230619_1886_Aki_TMTPro18x_K_F6 119.38 106.18 174380 132090 166220 185990 133610 199530 219860 214980 179930 215060 255760 249340 260990 243370 222260 256230 235060 246810 161110 121400 169280 183540 143950 200890 215500 218570 188590 218290 259030 251470 264450 251780 227590 256700 224860 234470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124960000 2300 390 2185 4230 3493 3493 1 9606 Homo sapiens 0.07305638153229665 ASAGPQPLLVQSCK Unmodified 1454.7551 0.75514863 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 1.5 0.5 1 1 48.766 48.799 3 3.8767E-22 13861 20230619_1881_Aki_TMTPro18x_K_F2 224.43 177.23 172200 139410 167780 164840 170820 175520 176110 179220 182160 182580 171090 186520 195550 169010 186510 215160 219110 210740 159180 127850 170810 164590 177220 176830 177510 182920 184910 184440 177280 188590 198440 177340 191770 215140 209270 200240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 238800000 2301 1292 2186 4231;4232 3494;3495 3495 2 9606 Homo sapiens 0.04596125983107413 ASALEQFVNSVR Acetyl (Protein N-term) 1361.6939 0.69392858 4692 Q9UNS2;C9JLV5;J3QL22;J3QS85;J3KTQ1;J3QKR0 COPS3 COP9 signalosome complex subunit 3 yes no 1 0 0 6.5 1.12 1 1 1 1 66.022 66.055 2 8.4281E-41 20761 20230619_1886_Aki_TMTPro18x_K_F6 214.83 188.73 14198 13402 10910 16265 18854 14256 15953 15994 25502 18494 18678 14115 18361 17432 20859 18406 21727 19810 13116 12288 11500 16159 18853 14629 16533 16288 25152 18446 19444 14658 18886 17924 21200 18568 20766 18807 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 286350000 2302 4692 2187 4233;4234;4235;4236 3496;3497;3498 3496 3 9606 Homo sapiens 0.02754937275312841 ASALIDRPAPYFER Unmodified 1604.8311 0.83109076 931 Q9Y2J2;Q9Y2J2-2;A0A0A0MSA4;A0A0A0MRA8;A8K968;B3KY28;Q9Y2J2-4;J3KT37;A0A1B0GTF8;B2RB02;Q9Y2J2-3 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 0 0 1 8 0 1 49.323 49.396 3 7.7855E-09 13271 20230619_1888_Aki_TMTPro18x_K_F8 161.09 124.14 120450 97287 115350 129200 128010 142010 126180 122770 154510 115910 118760 125560 123420 110880 111630 120930 145860 133030 111330 89331 117860 127980 131970 142170 128190 126610 154290 117900 123770 126510 125350 115380 115650 122020 139130 126270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171890000 2303 931 2188 4237 3499 3499 1 9606 Homo sapiens 0.052868461548541745 ASAPAADPPR Unmodified 951.47739 0.47739386 4580 Q9NR12;D6RF83;D6RH06;Q9NR12-3;Q9NR12-5;Q9NR12-6;Q9NR12-4 PDLIM7 PDZ and LIM domain protein 7 yes no 0 0 0 3 0 1 31.392 31.478 2 0.0038763 6163 20230619_1882_Aki_TMTPro18x_K_F3 95.531 50.449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2304 4580 2189 4238 3500 3500 1 9606 Homo sapiens -0.000285737677245379 ASAPESGLLSK Unmodified 1058.5608 0.56078914 4332 Q96CN7 ISOC1 Isochorismatase domain-containing protein 1 yes yes 0 0 0 6.5 0.5 1 1 47.672 47.756 2 1.0245E-08 12921 20230619_1886_Aki_TMTPro18x_K_F6 183.22 132.52 360230 253480 306190 348650 443760 515570 422580 420230 596560 472950 576150 593210 554450 521260 468250 637220 669040 613400 332390 232970 317930 346240 450140 506310 432490 437210 596580 479220 591080 594560 563060 545820 489660 636670 637800 583070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 320890000 2305 4332 2190 4239;4240 3501;3502 3501 2 9606 Homo sapiens 0.03385117889456524 ASAPESGLLSKV Unmodified 1157.6292 0.62920306 4332 Q96CN7 ISOC1 Isochorismatase domain-containing protein 1 yes yes 0 0 1 7 0 1 55.077 55.138 3 6.8572E-05 15792 20230619_1887_Aki_TMTPro18x_K_F7 95.094 69.435 56249 60075 62952 63493 81036 63555 70921 76062 65284 68272 71977 55372 67398 49097 75669 76412 69525 60489 52163 54990 63633 63894 82216 64646 71956 76605 67136 68983 73254 56689 69259 52323 76464 75455 66518 57655 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 302560000 2306 4332 2191 4241 3503 3503 1 9606 Homo sapiens 0.05669362469302541 ASAPSPNAQVACDHCLK Unmodified 1824.8247 0.82470153 3885 Q59GW5;Q14258;A0A3B3IUA7;I3L2W4 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes no 0 0 0 6.5 0.5 1 1 40.044 40.121 3 8.7916E-14 9561 20230619_1886_Aki_TMTPro18x_K_F6 161.91 152.16 79831 57245 77556 70004 130550 87854 119180 121240 114130 69327 79736 70277 90009 73120 50103 111380 129110 76511 73743 52544 79678 69956 130610 88377 120610 120100 115080 72908 83773 71595 89739 77311 56327 109180 122400 73232 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 56282000 2307 3885 2192 4242;4243 3504;3505;3506 3504 3 9606 Homo sapiens -0.05471783130451513 ASAQDAGDHVQPPEGR Unmodified 1633.7445 0.7444606 4327 Q96BK5 PINX1 PIN2/TERF1-interacting telomerase inhibitor 1 yes yes 0 0 0 1.5 0.5 1 1 32.053 32.083 3 1.2238E-08 6419 20230619_1881_Aki_TMTPro18x_K_F2 113.86 104.81 12340 10002 13133 13600 17490 18464 13348 13901 18764 18303 16674 18703 15631 14238 13334 16271 20675 19200 11416 9186 13340 13495 17713 18198 13868 14630 18738 18278 17169 18799 15893 14943 14019 16474 19700 18210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39783000 2308 4327 2193 4244;4245 3507;3508 3508 2 9606 Homo sapiens -0.047061851376383856 ASAQQENSSTCIGSAIK Unmodified 1750.8156 0.81557663 4624 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 0 6 0 1 44.011 44.103 3 2.1063E-10 11277 20230619_1886_Aki_TMTPro18x_K_F6 136.34 119.46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2309 4624 2194 4246 3509 3509 1 9606 Homo sapiens -0.029798532151062318 ASASAPAPASATEILLTPAREEQPPQHR Unmodified 2895.4839 0.48388281 2753 C9JG41;Q9NQX7;B4E028;B4DIB1;Q9NQX7-3 ITM2C Integral membrane protein 2C;CT-BRI3 yes no 0 0 1 6 0 1 48.257 48.336 4 6.9188E-62 13186 20230619_1886_Aki_TMTPro18x_K_F6 265.64 244.72 28704 26454 30640 31541 27461 32001 31147 31326 36232 30959 27398 33029 31822 22368 31094 35267 33198 32056 26578 24252 30923 31447 28887 32309 31355 32046 36271 31371 28766 33063 32279 24121 31770 35038 31735 30485 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47883000 2310 2753 2195 4247 3510;3511 3511 2 9606 Homo sapiens 0.11196022390686267 ASASDGSSFVVAR Unmodified 1252.6048 0.60477922 2812 Q5VZR0;D3DRP5;Q9H4G4;A0A087WUM5 GLIPR2;C9orf19 Golgi-associated plant pathogenesis-related protein 1 yes no 0 0 0 5 0 1 41.898 41.983 2 7.1332E-26 10332 20230619_1885_Aki_TMTPro18x_K_F5 207.29 173.91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2311 2812 2196 4248 3512 3512 1 9606 Homo sapiens -0.011418976841923723 ASASGSGAQVGGPISSGSSASSVTVTR Unmodified 2364.1517 0.15170921 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-4;P02545-5 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 4.5 3.5 1 1 42.724 42.726 3 1.1278E-113 11268 20230619_1880_Aki_TMTPro18x_K_F1 276.03 264.25 28634 25813 28263 36280 45395 54883 52638 49368 61399 50726 46197 48666 52416 46289 48444 48731 56800 56018 26491 23708 29073 35994 46031 53928 52868 50834 61436 51163 48409 49399 53139 47967 49790 49341 54260 53132 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1056299999.9999999 2312 1428 2197 4249;4250 3513;3514 3513 2 9606 Homo sapiens 0.024199427062285395 ASASTQPAALSAEQAK Acetyl (Protein N-term) 1571.7791 0.77911477 4404 Q99622;F5GXW5;U3KQ07 C12orf57 Protein C10 yes no 1 0 0 3.5 0.5 1 1 46.746 46.807 2 4.6684E-14 12670 20230619_1882_Aki_TMTPro18x_K_F3 143.79 101.68 30674 24629 30974 26997 27093 35160 32168 29308 37304 32883 35477 31387 40146 29747 25285 39431 37544 32803 28362 22573 31364 27193 28630 34795 32301 30443 37627 33015 36641 31907 40099 31263 26726 39057 35770 31244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192940000 2313 4404 2198 4251;4252 3515 3515 1 9606 Homo sapiens 0.016096379504915603 ASAVLPPTCIQLLDSSNWK Unmodified 2099.0721 0.072125671 3873 Q14008-2;Q14008;Q14008-3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 3 0 1 63.36 63.391 3 4.5173E-05 19864 20230619_1882_Aki_TMTPro18x_K_F3 89.877 67.003 34866 33524 39159 28251 33259 34594 33431 39870 40646 40481 32443 38364 45280 33290 38819 40366 40803 41838 32308 30642 39259 29115 35000 34657 33957 40346 40716 40802 34277 38845 45467 34913 39703 40530 39028 39719 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62411000 2314 3873 2199 4253 3516 3516 1 9606 Homo sapiens 0.06655249289178755 ASAVSELSPR Unmodified 1015.5298 0.52982336 1525;3803 Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4;A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 no no 0 0 0 5.5 0.5 1 1 41.443 41.528 2 1.0193E-10 10190 20230619_1886_Aki_TMTPro18x_K_F6 163.16 127.86 68407 57463 70026 67123 81996 93875 85841 81973 104610 83313 92671 80596 93351 80140 93113 91996 100500 86776 63277 52687 71175 67358 84369 92617 86884 84582 104960 84114 95602 81997 95259 83304 95083 91981 95996 82526 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146780000 2315 3803;1525 2200 4254;4255 3517;3518 3518 2 9606 Homo sapiens 0.022679645752305078 ASAVSPANLPAVLLQPR Acetyl (Protein N-term) 1744.9836 0.98356866 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4;Q05C05;P51610-3 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 1 0 0 2.5 0.5 1 1 65.008 65.028 2 1.2505E-38 20805 20230619_1881_Aki_TMTPro18x_K_F2 168.3 117.24 10181 9673.6 10756 7534.6 14576 10547 11631 10078 10955 9125.9 8419.4 10537 12048 9988.9 10912 9186.5 9914.6 9256.2 9428.1 8837.8 10909 7843.2 14709 10451 11875 10304 11106 9321.1 8935.1 10605 12124 10280 11050 9257.1 9491.3 8793.2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137340000 2316 1331 2201 4256;4257 3519;3520 3519 2 9606 Homo sapiens 0.14087621831663455 ASAYVFASPGCK Unmodified 1256.586 0.58595803 3362 V9HWF9;O95861-4;O95861;A6NF51;O95861-2;O95861-3;B7Z9J7 HEL20;BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes no 0 0 0 2.5 0.5 2 2 50.988 51.046 2;3 2.9091E-07 14592 20230619_1882_Aki_TMTPro18x_K_F3 166.97 134.03 176260 138760 174340 200040 198740 195890 211660 197810 241110 204320 222480 230310 238480 197680 198600 256650 251140 243670 162930 127540 177760 196850 204680 198460 213520 202230 243130 206990 229870 231600 241020 208090 205870 256060 239730 231600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 525710000 2317 3362 2202 4258;4259;4260;4261 3521;3522 3522 2 9606 Homo sapiens -0.03207150579601148 ASAYYPSSFPK Unmodified 1216.5764 0.57643921 3978 Q4V9L6;F8VS22 TMEM119 Transmembrane protein 119 yes no 0 0 0 2 0 1 52.001 52.04 2 0.004785 15333 20230619_1881_Aki_TMTPro18x_K_F2 89.886 58.812 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2318 3978 2203 4262 3523 3523 1 9606 Homo sapiens -0.02318595593487771 ASCASIDIEDATQHLR Acetyl (Protein N-term) 1827.8421 0.84212573 1743 A0A8B0RAT7;Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes no 1 0 0 2 0 1 55.326 55.347 2 1.5541000000000002E-64 16711 20230619_1881_Aki_TMTPro18x_K_F2 251.34 235.8 7298.6 6002 7139.9 8590.3 9034.6 6759.7 8098.8 7253.9 9612.6 6473 7532.2 7487.6 9723.6 8121.8 8242.9 10182 8497.9 9907.7 6747.8 5515.5 7298.9 8435.3 9185.7 6993.1 8264 7363.9 9617.4 6622.6 7921.7 7586.7 9784 8465.8 8433.2 10177 8138 9408.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 300540000 2319 1743 2204 4263 3524 3524 1 9606 Homo sapiens -0.03868164323807832 ASCLYGQLPK Unmodified 1135.5696 0.56957969 3419 V9HWE9;P09211;A8MX94;A0A087X2E9 HEL-S-22;GSTP1 Glutathione S-transferase P yes no 0 0 0 2 0.816 2 2 2 50.971 51.009 2;3 5.6101E-05 14571 20230619_1882_Aki_TMTPro18x_K_F3 137.95 101.99 622010 468500 604630 634670 662110 691100 648360 664060 714160 709850 736450 687280 755160 720010 799180 873030 815010 796110 574740 430400 616610 627940 682570 693950 656800 681460 724940 714400 755280 700420 772780 749290 813170 870400 779510 757030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 10044000000 2320 3419 2205 4264;4265;4266;4267;4268;4269 3525;3526;3527 3527 3 9606 Homo sapiens 0.007217682542886905 ASCTLETVWEDK Unmodified 1437.6446 0.64459513 2288 D3DWK1;B2RAR6;P29692-2;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;A0A8C8L741;E9PQR8;E9PN56;E9PRL0;E9PN71;E9PJV8;E9PPY1;E9PNC8;E9PKH7;E9PL21;E9PLA1;E9PLT8;E9PM66;E9PLS6;E9PI93;E9PIP5;E9PJ84;E9PLL8 EEF1D Elongation factor 1-delta yes no 0 0 0 4 0 1 59.426 59.428 2 0.00013026 18089 20230619_1883_Aki_TMTPro18x_K_F4 118.18 91.063 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2321 2288 2206 4270 3528 3528 1 9606 Homo sapiens -0.056721387958077685 ASDADGPGPNSDVR Unmodified 1356.5906 0.59058572 4373 Q96JQ0 DCHS1 Protocadherin-16 yes yes 0 0 0 1 0 1 32.517 32.517 2 0.0021008 6983 20230619_1880_Aki_TMTPro18x_K_F1 88.441 72.869 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2322 4373 2207 4271 3529 3529 1 9606 Homo sapiens -0.07344594903133839 ASDEVPLAPR Unmodified 1053.5455 0.54547343 2428 B3KVY9;Q8TB61-3;Q8TB61-2;Q8TB61 SLC35B2 Adenosine 3'-phospho 5'-phosphosulfate transporter 1 yes no 0 0 0 2.5 0.5 1 1 42.312 42.385 2 0.0074538 10620 20230619_1882_Aki_TMTPro18x_K_F3 84.615 64.838 141840 230590 137470 133220 160280 173350 164330 159630 201490 171540 191730 200810 219200 183340 174710 209460 226350 214690 131930 210030 140340 143450 164820 172310 166580 164330 202710 173710 198400 201960 220760 191080 181470 210280 215990 203900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105830000 2323 2428 2208 4272;4273 3530;3531 3531 2 9606 Homo sapiens 0.02084251092287559 ASDGSLLYNAGNICNHFFTR Unmodified 2256.0382 0.03819978 3968 Q3KQV9;Q3KQV9-2 UAP1L1 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 yes no 0 0 0 3 0 1 59.185 59.215 3 4.2608E-12 18095 20230619_1882_Aki_TMTPro18x_K_F3 143.04 110.56 15479 10819 17778 17509 13369 14936 13498 11854 16886 20327 21300 21174 26423 19016 20864 22074 22706 24676 14318 9963.7 17795 17089 14240 15225 13722 12565 17207 20116 21864 21380 26514 19870 21422 22275 21720 23402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42367000 2324 3968 2209 4274 3532 3532 1 9606 Homo sapiens -0.039577791498686565 ASDPEAGVAR Unmodified 971.46722 0.46722311 4627 Q9NY93-2;Q9NY93;Q53HB9;G3V0G3;H7C3E9 DDX56 Probable ATP-dependent RNA helicase DDX56 yes no 0 0 0 1.5 0.5 1 1 32.201 32.231 2 0.00029253 6880 20230619_1880_Aki_TMTPro18x_K_F1 133.12 90.254 18678 9875.7 19135 22548 34040 39540 27330 32607 28233 21438 29533 37396 27803 24787 24432 15247 34960 30901 17236 9156.7 19649 21915 34009 38494 27980 33468 28741 22750 30216 36763 28286 25486 25428 16387 33319 29199 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21261000 2325 4627 2210 4275;4276 3533 3533 1 9606 Homo sapiens -0.019651814929488864 ASDPGLPAEEPK Unmodified 1209.5877 0.58773217 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 3 0 1 44.271 44.344 3 0.0048618 11523 20230619_1882_Aki_TMTPro18x_K_F3 75.479 41.612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2326 2980 2211 4277 3534 3534 1 9606 Homo sapiens -0.00867818290021205 ASDVHEVR Unmodified 911.44609 0.44609374 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;Q504U3;A0A024R609;H3BQ34;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 1 0 1 26.67 26.67 3 0.0074997 4716 20230619_1880_Aki_TMTPro18x_K_F1 83.168 59.212 18229 11753 23476 25272 42764 33314 31624 40828 23719 17718 32237 42001 21681 26836 25846 11557 36006 35363 16874 10875 23697 24500 42444 33249 32315 40547 24918 19852 32292 40972 22723 27351 26687 13244 34347 33338 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21678000 2327 370;3451 2212 4278 3535 3535 1 9606 Homo sapiens -0.013171468018072119 ASDVHEVRK Unmodified 1039.5411 0.54105675 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;Q504U3;A0A024R609;H3BQ34;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 1 4.5 0.5 1 1 30.238 30.31 4 0.00030921 5797 20230619_1885_Aki_TMTPro18x_K_F5 105.52 73.315 37431 15285 71564 62005 167560 112230 80227 132780 48427 33021 80801 98804 35750 58748 75589 17724 85389 70507 34765 14399 71136 59384 163350 110190 85153 131360 52394 40594 79612 95898 39999 59638 76372 21631 81502 66463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56052000 2328 370;3451 2213 4279;4280 3536 3536 1 9606 Homo sapiens 0.022867866693559336 ASEAGEVPFNHEILR Unmodified 1667.8267 0.82673367 2215 B2R514;E7EM64;Q7L5N1 COPS6 COP9 signalosome complex subunit 6 yes no 0 0 0 3.5 0.5 1 1 46.573 46.634 3 3.6688000000000005E-25 12603 20230619_1882_Aki_TMTPro18x_K_F3 185.67 155.18 209590 189670 202630 218490 291840 192940 220880 215930 270320 192420 203150 243910 208310 218590 197110 240480 229880 272530 193870 173840 207660 218040 293240 197980 228320 218500 269820 197420 212110 244360 212270 227290 202700 242980 219920 258350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 458610000 2329 2215 2214 4281;4282 3537;3538 3537 2 9606 Homo sapiens 0.019533369413466062 ASEEAFVK Unmodified 879.4338 0.43379771 469 A0A024R7S3;P09497-2 CLTB Clathrin light chain B yes no 0 0 0 3.5 0.5 1 1 44.95 45.008 2 0.0021011 11845 20230619_1882_Aki_TMTPro18x_K_F3 132.08 60.215 207450 157920 188990 232840 208540 213500 254150 222640 281340 265580 285970 281660 303320 228860 241180 266420 305590 288550 191590 145210 194100 228610 216190 217560 254330 228120 285210 266600 293850 283380 305910 239970 250020 268300 291640 273900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115100000 2330 469 2215 4283;4284 3539;3540 3539 2 9606 Homo sapiens -0.010741832648591298 ASEEEPEYGEEIK Unmodified 1508.6518 0.65184857 2218 B2R5M3;P05060;B4DEA7 CHGB Secretogranin-1;PE-11;GAWK peptide;CCB peptide yes no 0 0 0 1 0 1 50.863 50.863 3 9.6146E-08 14725 20230619_1880_Aki_TMTPro18x_K_F1 122.46 89.264 51924 54020 68209 64442 68012 53973 85896 88681 74601 39223 32285 30530 37624 30285 48773 32663 36389 26808 48218 49506 67902 64155 70869 56217 85206 86864 74854 42029 35393 31418 38757 31382 48621 32518 34870 25559 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24452000 2331 2218 2216 4285 3541 3541 1 9606 Homo sapiens -0.0821312771436169 ASEEHLK Unmodified 812.40283 0.40283194 3490 Q32Q12;P22392-2;J3KPD9;Q6FHN3;P22392;F6XY72 NME1-NME2;NME2 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B yes no 0 0 0 2.5 0.5 1 1 32.601 32.667 3 0.011919 6761 20230619_1881_Aki_TMTPro18x_K_F2 89.752 44.44 78683 41458 145850 129340 250850 205440 148290 245970 113630 79177 169500 217410 91231 118010 178900 53914 180850 163580 73108 38699 143940 124310 248650 202810 154750 243690 119770 92929 168350 210880 100010 121460 179770 61775 172900 154270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54810000 2332 3490 2217 4286;4287 3542;3543 3542 2 9606 Homo sapiens -0.010873365790871503 ASEELDGLFR Unmodified 1135.551 0.55095274 4035 Q5IRN4;Q05BX2;Q4LE66;Q14814-4;Q14814 MEF2D/DAZAP1 fusion;MEF2D;MEF2D variant protein Myocyte-specific enhancer factor 2D yes no 0 0 0 3 0 1 56.428 56.464 2 0.0085297 16965 20230619_1882_Aki_TMTPro18x_K_F3 83.647 34.111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2333 4035 2218 4288 3544 3544 1 9606 Homo sapiens -0.011400701159118398 ASEELQK Acetyl (Protein N-term) 845.41306 0.41306227 552 Q6NVY0;A0A024R904;Q9HB71;B4DFD3;Q9HB71-2;B2ZWH1 CACYBP Calcyclin-binding protein yes no 1 0 0 1 0 1 42.866 42.866 2 0.00067527 11287 20230619_1880_Aki_TMTPro18x_K_F1 86.086 72.415 169010 98431 205870 201990 235360 305290 192160 242670 214640 195710 269660 302080 250820 224950 230560 151300 319120 292460 156280 91046 206510 196600 241270 299070 197230 250820 219480 203530 273460 298940 255750 230780 239210 161420 304290 276380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 460130000 2334 552 2219 4289 3545 3545 1 9606 Homo sapiens -0.0158277364452033 ASEGPAFFPGR Unmodified 1134.5458 0.54580778 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 7 0.816 1 1 1 48.233 48.31 2 1.5128E-06 13137 20230619_1886_Aki_TMTPro18x_K_F6 166.61 102.35 574300 467280 509240 601960 496220 562740 599160 559360 607500 655380 637940 656990 732070 601080 653160 777110 739830 758970 530530 428910 523120 596210 519380 571930 598430 574520 620030 657160 657410 665130 740340 631290 671030 776700 707160 721000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 722570000 2335 4414 2220 4290;4291;4292 3546;3547 3546 2 9606 Homo sapiens -0.0160832918786582 ASEIMVDDEELAQHPATTEDIR Unmodified 2469.1329 0.13294761 2518 B4DKU3;Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 0 0 0 1 0 1 51.586 51.586 3 6.491999999999999E-46 15021 20230619_1880_Aki_TMTPro18x_K_F1 252.66 236.17 38452 35009 36120 38531 36233 46203 39527 43964 44066 42147 30851 30602 54399 32839 33529 53514 45853 49056 35562 32072 36910 38735 37773 46079 39814 44993 44161 42348 33289 31705 53709 34966 35252 53123 43775 46629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74551000 2336 2518 2221 4293 3548 3548 1 9606 Homo sapiens -0.04285354979856493 ASELKEEIK Unmodified 1045.5655 0.56554017 4409 Q9BPX3;Q6NUR1;H0Y9Z8 NCAPG Condensin complex subunit 3 yes no 0 0 1 5 0 1 46.22 46.297 3 0.026651 12178 20230619_1885_Aki_TMTPro18x_K_F5 63.076 23.227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2337 4409 2222 4294 3549 3549 1 9606 Homo sapiens 0.04458002032220065 ASENAIVWK Unmodified 1016.5291 0.52909508 853 Q96CW1;Q96CW1-2;A0A087WY71;B4E304;E9PFW3;B4DNB9;C9JPV8;C9JGT8;B4DJB1;C9JJD3;H7C4C3;B4DFM1;C9JTK4;A0A8I5KWD3;B4DTI4;B7Z4N2 AP2M1 AP-2 complex subunit mu yes no 0 0 0 7 0 1 51.088 51.166 2 0.013433 14101 20230619_1887_Aki_TMTPro18x_K_F7 78.934 36.113 140390 125270 144590 143090 133910 158420 148540 147440 171720 181600 179800 173260 204870 147360 166370 199910 208620 193310 129920 114810 146370 143290 140430 158790 149700 152290 174060 181430 185120 175440 206320 155770 172360 199570 199090 183730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115300000 2338 853 2223 4295 3550 3550 1 9606 Homo sapiens 0.02149169926178729 ASEQIYGTPSSSPYECLR Unmodified 2043.9208 0.92076999 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3 DCTN1;DKFZp686I0746 Dynactin subunit 1 yes no 0 0 0 5 0 1 50.113 50.189 3 2.3509E-09 13838 20230619_1885_Aki_TMTPro18x_K_F5 122.29 118.95 162820 134930 142780 151890 147470 172750 172480 172320 199060 187220 192790 194510 188260 178070 173700 212440 213560 200180 150420 123680 146860 152330 153630 173110 173280 176460 201010 188660 197910 196610 191760 185940 179300 212140 203850 190310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 234670000 2339 1717 2224 4296 3551;3552 3551 2 9606 Homo sapiens -0.059433568093709255 ASEQIYYENR Unmodified 1271.5782 0.57823012 1702 Q53FL1;A0A7P0Z463;H0YC24;A0A7P0T9B0;Q508I8;Q508I6;Q508I5;Q508I7;Q9H6X2-3;Q9H6X2-4;Q9H6X2-6;Q9H6X2-2;Q9H6X2-5;Q9H6X2 ANTXR1;ANTXR1/NNG1 fusion Anthrax toxin receptor 1 yes no 0 0 0 3 0 1 39.925 39.981 2 0.005083 9609 20230619_1882_Aki_TMTPro18x_K_F3 90.108 70.496 14668 13100 13566 15941 21769 22529 20909 20959 24878 19038 24430 22513 22580 19904 25129 17990 28367 28928 13562 12013 14012 15948 21934 22247 21245 21462 25076 19461 24999 22612 23233 20531 25646 18743 27114 27358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26290000 2340 1702 2225 4297 3553 3553 1 9606 Homo sapiens -0.04669586575550966 ASESSKPWPDATYGTGSASR Unmodified 2053.9341 0.93411186 1525;3803 Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4;A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 no no 0 0 1 7.5 0.5 1 1 44.384 44.435 3 4.2726E-16 11240 20230619_1888_Aki_TMTPro18x_K_F8 157.88 148.23 149750 124670 141160 158900 147560 180590 192320 173740 162840 210720 202680 185300 215230 168830 192980 201390 200720 175660 138420 114410 144380 157920 154000 180760 190390 178970 169370 210100 206540 188730 218080 176470 197090 200420 191800 167210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 420510000 2341 3803;1525 2226 4298;4299 3554;3555 3555 2 9606 Homo sapiens -0.050697827057319955 ASEVEEILDGNDEK Unmodified 1546.6999 0.6998614 3016 Q12824;Q12824-2;G5E975;Q9H836;A0A0G2JRV3;C9JTA6;A0A2R8Y5N5;B4DRT1;B4E117;A0A0G2JSE9;Q86WI8;A0A2R8YEE8;A0A0U1RRB8;Q86WI7;A0A0U1RQQ2;B5MCL5 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes no 0 0 0 1.5 0.5 1 1 59.829 59.835 3 5.2409E-09 18414 20230619_1880_Aki_TMTPro18x_K_F1 161.87 147.6 92521 71848 82011 85040 81294 100730 86786 96640 99817 99528 99369 112030 120780 95300 102250 116580 127680 127690 85444 65905 84198 85020 84775 100550 87638 99053 100980 100800 102990 112580 121680 100030 105770 117390 121920 121160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 416310000 2342 3016 2227 4300;4301 3556 3556 1 9606 Homo sapiens -0.051620537943335876 ASEVFCWGQNK Unmodified 1324.587 0.58702067 54 A8K9U4;A0A024QZN8;Q5GLZ8-6;Q5GLZ8-3;Q5GLZ8-2;Q5GLZ8;D6RCL5;H0Y6K7 HERC4 Probable E3 ubiquitin-protein ligase HERC4 yes no 0 0 0 1 0 1 55.645 55.645 3 0.039823 16685 20230619_1880_Aki_TMTPro18x_K_F1 47.971 33.552 51366 45381 47030 43061 47809 55502 52642 55967 58892 52602 50926 49645 53785 45075 50862 58417 58333 57473 47487 41528 48127 43892 49763 55209 53002 57023 59322 53258 52748 50402 54672 47360 52225 58413 55734 54601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19429000 2343 54 2228 4302 3557 3557 1 9606 Homo sapiens -0.06228936210709435 ASEVFLQR Unmodified 948.50288 0.50288033 4491;3802 Q05CW7;Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 no no 0 0 0 6 0.816 1 1 1 45.326 45.409 2 0.027581 11819 20230619_1886_Aki_TMTPro18x_K_F6 82.241 50.305 470330 347210 474960 485730 537740 594360 509840 544440 640440 590850 631810 700200 715310 585320 573880 569990 779960 745930 434670 319120 483080 480460 553030 591500 519890 560770 644770 598080 652600 701490 720710 607090 597330 582940 744040 706750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 277060000 2344 3802;4491 2229 4303;4304;4305 3558 3558 1 9606 Homo sapiens 0.02656900754709568 ASEWVQQVSGLMDGK Unmodified 1633.777 0.77700628 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PGB5 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 1 0 1 63.498 63.498 3 1.4855E-05 19914 20230619_1880_Aki_TMTPro18x_K_F1 109.35 89.253 33448 26591 31509 34597 24097 32993 29312 33505 34042 35972 34779 42251 42689 39156 40884 39582 42559 44383 30908 24413 32080 34258 25818 33477 29428 34259 34464 36407 36054 42473 43251 40506 41689 40048 40717 42098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46022000 2345 1637 2230 4306 3559 3559 1 9606 Homo sapiens -0.014531140590179348 ASEWVQQVSGLMDGK Oxidation (M) 1649.7719 0.7719209 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PGB5 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 1 0 7.5 0.5 1 1 59.518 59.561 3 3.4982E-06 17560 20230619_1887_Aki_TMTPro18x_K_F7 117.76 101.82 46548 37511 44309 46604 39851 43821 44848 45142 46460 65225 67927 76067 72061 59596 62956 73774 73972 77868 43021 34420 45140 46289 41879 44564 45017 46574 48173 65122 68915 76134 72968 62774 64847 74105 70697 73902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200690000 2346 1637 2230 4307;4308 3560 3560 1058 1 9606 Homo sapiens -0.02697417921649503 ASEYSPASLDAFGAFLK Unmodified 1772.8621 0.86211612 2362 B3KVN6;B3KRF7;E9PC66;B3KNP9;P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 yes no 0 0 0 8 0 1 64.163 64.184 3 0.0034364 19617 20230619_1888_Aki_TMTPro18x_K_F8 69.431 48.18 10611 11078 12849 11645 11206 11658 14388 12988 16157 13749 15841 18293 15095 12761 15263 12221 17097 19186 9845.5 10140 12835 11726 11843 11826 14377 13204 16334 13992 16254 18159 15438 13326 15601 12689 16355 18142 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28169000 2347 2362 2231 4309 3561 3561 1 9606 Homo sapiens 0.006599546784400445 ASFANEDGQVSPGSLLLAGAIAGMPAASLVTPADVIK Unmodified 3537.8389 0.83888484 4002 Q53GR7;Q9UJS0;Q9UJS0-2;B7Z2E2 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes no 0 0 0 2 0 1 67.195 67.202 4 0.0013621 21700 20230619_1881_Aki_TMTPro18x_K_F2 65.021 53.71 782.98 0 1978.5 714.41 1504.7 1297.8 1697.2 745.67 0 1494 2612.6 2563.9 1838.7 0 2011.1 1445.2 1676.7 1090.4 728.63 0 1895.4 670.82 1595 1255.1 1649.7 822.81 0 1496.6 2524.3 2466.4 1896.4 0 2020.2 1410.7 1603.4 1041.6 1 0 1 1 1 1 1 1 0 1 1 1 1 0 1 1 1 1 4277100 2348 4002 2232 4310 3562 3562 1 9606 Homo sapiens 0.1714789556726828 ASFENNCEIGCFAK Unmodified 1645.6865 0.68647672 3667 P56537;P56537-2;B7ZBH1;F8WD20;B4DJH0;A0A0B4J1Y7;F8WDS6 EIF6 Eukaryotic translation initiation factor 6 yes no 0 0 0 6 0.816 1 1 1 53.986 54.057 3 4.297E-09 15621 20230619_1886_Aki_TMTPro18x_K_F6 163.33 129.15 205350 169120 194470 197170 185740 205790 216780 209580 223280 248030 237280 218640 263290 204390 254580 253820 236190 248760 189810 155080 198350 197000 194450 207580 217020 214880 227840 247660 243860 222870 267290 214040 258010 254010 226250 236280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 770570000 2349 3667 2233 4311;4312;4313 3563 3563 1 9606 Homo sapiens -0.11053906378901956 ASFITPVPGGVGPMTVAMLMQSTVESAK Unmodified 2805.4115 0.41149441 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A494C1T2;A0A8V8TL46;A0A8V8TMA9 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 5.33 0.471 2 1 67.286 67.329 3;4 4.7982E-09 21110 20230619_1885_Aki_TMTPro18x_K_F5 104.33 100.99 8868.3 6238.6 7618.7 6406 4515.8 6319 8005 7753.2 9352.3 10625 9964.9 11179 12588 11039 7733.4 15687 19141 19667 8183.5 5717.7 7791.4 6463.8 5044.6 6429.6 7913.2 7897.7 9482.4 10599 10312 11324 12551 11644 8622.1 15882 18207 18635 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41222000 2350 2973 2234 4314;4315;4316 3564;3565 3564 2 9606 Homo sapiens 0.08100512676855942 ASFNHFDK Unmodified 964.44028 0.44028008 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3;A0A0S2Z3X3;A0A0S2Z3C0 ACTN4 Alpha-actinin-4 yes no 0 0 0 7 0 1 41.32 41.391 3 0.00077748 9842 20230619_1887_Aki_TMTPro18x_K_F7 121.73 91.548 65478 54542 64770 69238 69202 73881 70960 73228 91308 50492 50852 53208 46567 41226 52143 52487 56427 54418 60547 50052 65943 68777 71590 74340 72059 74254 90127 52398 53921 53500 47968 43511 53162 52672 53933 51673 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20440000 2351 1069 2235 4317 3566 3566 1 9606 Homo sapiens -0.04336245313481868 ASFNNPDR Unmodified 919.41479 0.41479361 3653 P54727;B4DEA3;Q53F10;B7Z4W4;B7ZA74;P54727-2;H0Y579 RAD23B UV excision repair protein RAD23 homolog B yes no 0 0 0 4 0.816 1 1 1 33.786 33.855 2 0.0013578 7083 20230619_1883_Aki_TMTPro18x_K_F4 143.91 88.468 250540 127390 270330 287480 352500 370340 294430 324850 341890 266600 404470 476310 361440 331800 354150 185810 471850 459700 231270 118120 274260 277910 357940 366870 301870 333460 347700 278970 410640 468520 370130 339460 365760 204980 450240 433770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 749280000 2352 3653 2236 4318;4319;4320 3567;3568 3568 2 9606 Homo sapiens -0.04813719835908614 ASFPQGPIGGANR Unmodified 1270.6418 0.64183343 890 A0A087X1K9;E5RGR0;Q6IAQ1;B4DJV9;O75608-2;O75608 LYPLA1 Acyl-protein thioesterase 1 yes no 0 0 0 1.5 0.5 1 1 44.951 44.992 2 6.8407E-08 12109 20230619_1881_Aki_TMTPro18x_K_F2 165.18 140.84 161170 145570 158290 160370 154790 175670 179550 172860 191840 157670 168790 147130 166430 140850 173820 173540 172010 149900 149100 133370 161010 161020 161750 176450 179980 176400 193700 159910 174070 149780 170280 147200 176510 172570 164440 142710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 544110000 2353 890 2237 4321;4322 3569;3570 3570 2 9606 Homo sapiens 0.017338186522238175 ASFVQTR Unmodified 807.4239 0.42390173 1578 A0A5F9ZHN7;Q9NTJ5;E9PGZ4;B4DVV3;Q9NTJ5-2;F8WDN7 SACM1L Phosphatidylinositide phosphatase SAC1 yes no 0 0 0 7.5 0.5 1 1 37.235 37.261 2 0.073323 8374 20230619_1888_Aki_TMTPro18x_K_F8 75.692 46.794 55924 38822 49310 57192 56218 64325 56898 57589 83549 50905 55462 58316 55873 49779 63077 52807 74912 57945 51612 35711 50794 56307 57952 64321 58129 59130 82379 52105 58278 58568 57402 51782 64599 53346 71444 55045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29563000 2354 1578 2238 4323;4324 3571 3571 1 9606 Homo sapiens 0.012486735204220167 ASFVTEVLAHSGR Acetyl (Protein N-term) 1414.7205 0.72047768 2242 B2R7C2;O43264;O43264-2;B4DUQ3;F5H3C1 ZW10 Centromere/kinetochore protein zw10 homolog yes no 1 0 0 6.5 0.5 1 1 63.094 63.134 2 1.2046E-27 19249 20230619_1887_Aki_TMTPro18x_K_F7 169.93 142.41 46040 50747 74237 61525 79491 60600 74656 81377 74033 67007 58094 56034 64992 51003 89232 63393 64271 62912 42880 46506 73037 61301 81706 61900 75577 81276 74861 68128 60718 57228 67217 53467 88788 63563 61726 59764 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94821000 2355 2242 2239 4325;4326 3572 3572 1 9606 Homo sapiens 0.02970626166643342 ASGAGSEFQDQTR Unmodified 1352.5957 0.5956711 4030 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 yes yes 0 0 0 2 0 1 35.469 35.526 2 2.4521E-10 7892 20230619_1881_Aki_TMTPro18x_K_F2 209.19 185.87 22395 15687 21191 20931 24360 25998 24292 20357 30863 27753 28484 26517 36157 25229 24035 25787 36135 28809 20680 14413 21671 20768 25057 25777 24690 21393 30980 27634 29643 26927 36055 26131 25325 26072 34406 27357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24686000 2356 4030 2241 4327 3573 3573 1 9606 Homo sapiens -0.06652291040541058 ASGCEGEDVVTLLK Unmodified 1476.713 0.71300904 2017 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 yes no 0 0 0 4 0 1 58.013 58.016 3 1.1337E-06 17511 20230619_1883_Aki_TMTPro18x_K_F4 122.45 92.64 46303 34290 40499 40297 34165 55256 43819 45397 51301 55874 49081 56622 52000 43532 55954 61626 61237 65829 42745 31458 41549 40401 36412 54469 43866 47320 51789 55921 50659 56977 53174 46306 57153 61850 58571 62463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147900000 2357 2017 2242 4328 3574 3574 1 9606 Homo sapiens -0.006278942159269718 ASGDLIPWTVSEQFQDPDFGGLSGGR Unmodified 2735.2827 0.28272339 4491 Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 yes no 0 0 0 6 0 1 64.625 64.669 3 3.1937E-20 20196 20230619_1886_Aki_TMTPro18x_K_F6 148.28 140.66 12674 10178 12173 12457 13488 11613 16421 13955 14111 14575 12874 13452 14679 18452 10752 15049 15890 21222 11714 9337.7 12428 12388 13949 11871 16308 14118 14467 14666 13349 13874 14784 18675 11311 15511 15191 20072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49469000 2358 4491 2243 4329 3575 3575 1 9606 Homo sapiens -0.015506666458350082 ASGDSARPVLLQVAESAYR Unmodified 1989.028 0.02795267 4002 Q53GR7;Q9UJS0;Q9UJS0-2;B7Z2E2 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes no 0 0 1 1.5 0.5 1 1 54.719 54.731 3 1.6342E-60 16239 20230619_1880_Aki_TMTPro18x_K_F1 302.74 258.95 111560 87919 114660 107880 80204 102870 104030 99000 110680 125410 116410 112510 154170 116370 120920 143020 119470 116740 103160 80670 115670 107280 86774 104300 103790 102150 112720 124930 120780 114980 154440 121370 123590 141770 114300 111170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 698140000 2359 4002 2244 4330;4331 3576 3576 1 9606 Homo sapiens 0.07299981187179583 ASGEMASAQYITAALR Unmodified 1638.8036 0.80355538 1976 A6NJA2;B2RD79;P54578-2;P54578-3;P54578;D3DUG9;B3KTG4 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 4.5 3.5 1 1 57.871 57.897 3 1.4771999999999998E-19 16932 20230619_1888_Aki_TMTPro18x_K_F8 209.56 197.58 68634 50140 65763 66729 56460 72019 62152 68227 75773 77849 65805 73039 76383 75117 66938 85938 85120 83708 63399 46059 66912 66092 59640 72304 62798 70202 76086 78026 68497 74417 77271 77947 69340 86010 81257 79535 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152250000 2360 1976 2245 4332;4333 3577;3578 3578 2 9606 Homo sapiens 0.00970574832354032 ASGFEESMK Unmodified 984.42225 0.42224675 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q6JH03;Q6JH02 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 3.33 0.471 2 1 45.659 45.719 2 0.00041505 12036 20230619_1883_Aki_TMTPro18x_K_F4 149.94 76.006 87106 67900 75779 82715 98175 113960 98832 92826 117310 104140 122000 121300 119800 101920 102690 125980 131290 121270 80434 62300 78315 82706 100310 112360 100150 96596 118600 105210 124830 121740 121550 107020 106430 125890 125270 115270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113650000 2361 1863 2246 4334;4335;4336 3579;3580 3580 2 9606 Homo sapiens -0.07058748350482347 ASGGSGGVSVPALWSEVNR Acetyl (Protein N-term) 1870.9173 0.91733959 3327 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;O76094-2;R4GNC1 HEL103;SRP72 Signal recognition particle subunit SRP72 yes no 1 0 0 6 0 1 63.528 63.576 2 3.4823E-49 19702 20230619_1886_Aki_TMTPro18x_K_F6 165.51 149.93 32760 25635 27384 32657 27603 30007 34368 32883 35648 36068 39083 37372 42187 33370 32771 47085 41181 42155 30243 23531 28302 32366 28840 30612 34299 33491 36383 36315 40053 37777 42499 35283 34035 46775 39328 40088 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79441000 2362 3327 2247 4337 3581 3581 1 9606 Homo sapiens 0.01671761198963395 ASGKFELLDR Unmodified 1134.6033 0.60332266 1348;1872 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A994J4Z2;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;Q59FZ6;A0A2R8YF80;A0A2R8YGP5;B4E0F1;B4DSI8;B3KNW7;A0A2R8Y523;A0A2R8YFV8;B4DSC8;A0A994J4Z7;P51531-2;P51531;B4DK35;A0A994J501;A0A0U1RQZ9;F6VDE0;A0A994HRU5 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 1 8 0 1 48.283 48.349 3 0.0040159 12820 20230619_1888_Aki_TMTPro18x_K_F8 77.597 46.412 216370 200420 200080 206140 200430 190470 209280 213720 190860 223650 227670 194140 229080 174740 230810 236330 209040 174080 200110 183490 204590 207670 208110 194530 210070 216990 197140 224470 231760 197940 233640 184160 233490 233040 199980 166130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131940000 2363 1348;1872 2248 4338 3582 3582 1 9606 Homo sapiens 0.04140513017682679 ASGNLGNTLK Unmodified 973.51926 0.51925868 933 A0A0A0MRC4;Q86YR5;A0A0A0MSK4;Q86YR5-4;Q86YR5-3;A0A087WVF5;P81274;B4DIF1;B2RAL8;A0A6Q8PGS6;Q5T1N9;H0Y4A4;A0A6Q8PGW7;A0A6Q8PFD2;A0A6Q8PGU2;A0A6Q8PF02;A0A024R0F8 GPSM1;GPSM2 G-protein-signaling modulator 1;G-protein-signaling modulator 2 yes no 0 0 0 1 0 1 43.123 43.123 2 0.015043 11467 20230619_1880_Aki_TMTPro18x_K_F1 90.05 36.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2364 933 2249 4339 3583 3583 1 9606 Homo sapiens 0.031439819208117115 ASGNYATVISHNPETK Unmodified 1687.8166 0.81656291 3734 P62917;E9PKZ0;G3V1A1;B4DVG7 RPL8 60S ribosomal protein L8 yes no 0 0 0 5.75 2.28 1 1 1 1 42.309 42.372 3 1.1378000000000001E-25 10438 20230619_1888_Aki_TMTPro18x_K_F8 179.74 160.92 560110 410390 467950 524480 502990 583280 586230 552090 575260 613200 630700 604810 742400 590390 575190 777800 719770 736840 516880 376830 483970 520990 522210 584540 585890 567890 589200 616180 649120 614360 746030 619570 596940 775670 687390 700230 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 4086999999.9999995 2365 3734 2250 4340;4341;4342;4343 3584;3585;3586;3587;3588 3588 5 9606 Homo sapiens 0.00016729216054045537 ASGNYATVISHNPETKK Unmodified 1815.9115 0.91152593 3734 P62917;E9PKZ0;G3V1A1;B4DVG7 RPL8 60S ribosomal protein L8 yes no 0 0 1 3.67 3.09 1 1 1 41.243 41.267 4 4.4269E-09 10621 20230619_1880_Aki_TMTPro18x_K_F1 128.72 112.6 426580 402400 416090 427800 470130 435570 450930 484540 392670 475450 461250 402830 462450 368250 427940 490610 471620 380250 394740 368490 424310 430350 482670 441390 454280 491230 406620 478450 469750 411380 470130 387490 438500 484740 450190 362670 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 355740000 2366 3734 2251 4344;4345;4346 3589;3590;3591;3592 3589 4 9606 Homo sapiens 0.03620662687239928 ASGPGLNTTGVPASLPVEFTIDAK Unmodified 2341.2165 0.2165413 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 0 0 8 0 1 63.01 63.036 3 0.0090983 19108 20230619_1888_Aki_TMTPro18x_K_F8 51.827 34.026 74187 66242 82533 80334 69043 73196 80584 83428 103430 86870 82185 80894 95835 87199 95035 84621 85613 93269 68701 60746 82922 79916 73078 74812 81313 84617 103210 87471 85930 82599 97370 89606 96074 85610 82058 88468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 416420000 2367 3484 2252 4347 3593 3593 1 9606 Homo sapiens 0.09958169250148785 ASGPPVSELITK Unmodified 1197.6605 0.66050319 1927;3462;3463 Q4VB24;A3R0T8;P10412;A3R0T7;B2R984;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 no no 0 0 0 5.12 2.76 1 2 1 2 2 53.693 53.741 2;3 1.183E-09 15083 20230619_1887_Aki_TMTPro18x_K_F7 170.4 121.05 604580 498130 588010 579890 526260 543650 591030 564660 575280 623240 678680 680050 711190 637920 667640 712240 709330 711740 558940 456750 597630 578700 552830 553240 592000 577220 591310 628340 693000 686480 722920 663170 682220 714460 678300 676010 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 53732000000 2368 1927;3462;3463 2253 4348;4349;4350;4351;4352;4353;4354;4355 3594;3595;3596;3597;3598 3597 5 9606 Homo sapiens 0.06957935503419321 ASGQAFELILSPR Unmodified 1387.746 0.74596415 2660 B5BU83;P16949;A2A2D0;Q96CE4;A0A140VJW2;P16949-2;Q59G27 STMN1 Stathmin yes no 0 0 0 3.67 3.09 1 1 1 60.741 60.747 3 8.1808E-08 18721 20230619_1880_Aki_TMTPro18x_K_F1 149.57 112.14 55568 21578 48725 52510 39502 44578 47340 49027 52440 52210 47814 53712 50974 48055 52107 57899 44967 63638 51161 20073 49945 50332 42000 45724 47462 49879 52970 52632 49468 54253 52003 50267 52613 58327 43223 60314 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 510560000 2369 2660 2254 4356;4357;4358 3599;3600;3601 3599 3 9606 Homo sapiens 0.06760100689098181 ASGQESEEVADDYQPVR Unmodified 1878.8232 0.82316443 4217 Q8IYW5 RNF168 E3 ubiquitin-protein ligase RNF168 yes yes 0 0 0 1 0 1 42.413 42.413 3 0.0077444 11153 20230619_1880_Aki_TMTPro18x_K_F1 46.494 33.168 26342 15146 26009 26100 30196 33391 29267 28889 38131 29548 31047 37394 34542 29307 30123 24065 42690 42955 24310 13973 26512 25536 31024 33090 29832 29843 38044 30084 32380 37284 34949 30249 31365 25344 40726 40598 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18109000 2370 4217 2255 4359 3602 3602 1 9606 Homo sapiens -0.08109422413849643 ASGSENEGDYNPGR Unmodified 1451.5913 0.591314 1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;Q59H80;B7ZB27;B4DLV2;Q8WTY5 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 0 0 0 1 0 1 32.522 32.522 2 2.4809E-06 7008 20230619_1880_Aki_TMTPro18x_K_F1 131.43 117.66 3313.7 2211.4 6012.5 5617.6 4956.7 8536.8 3737.7 5485.1 5033.9 5051.7 6987.6 11982 6401.4 8449.9 10092 3026.8 10211 11494 3081.3 2052.2 5866.8 5422.4 5219.7 8325.1 3891.7 5801.6 5131.8 5338.9 7093.3 11700 6747.2 8539.9 10164 3626.7 9777.1 10823 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5589400 2371 1843 2256 4360 3603 3603 1 9606 Homo sapiens -0.11641800254096779 ASGSENEGDYNPGRK Unmodified 1579.6863 0.68627702 1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;Q59H80;B7ZB27;B4DLV2;Q8WTY5 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 0 0 1 3 0 1 33.986 34.051 3 6.3116E-06 7180 20230619_1882_Aki_TMTPro18x_K_F3 99.747 87.387 22659 11968 28298 32721 40005 36898 31939 35936 31918 22525 43740 55723 35104 41285 44917 17525 52216 50530 20949 11137 28469 31346 40331 36945 32696 36433 32927 24493 44046 54500 36645 41777 45747 19937 49878 47650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15862000 2372 1843 2257 4361 3604 3604 1 9606 Homo sapiens -0.08037866782910896 ASGSGGGSAALGPSGFGPSGGSGTK Unmodified 2006.9294 0.92936084 730 P25440-2;P25440;P25440-3;A0A0G2JK44;A0A140T9E9;H0Y6K2;A0A024RCR5;X5CF57;A0A1U9X7A8;P25440-4;A0A1U9X7B8;A0A1U9X7B4;A0A1U9X7B3;A0A140T9V2;A0A140T9I1;A0A0G2JHN8 BRD2 Bromodomain-containing protein 2 yes no 0 0 0 1.5 0.5 1 1 46.534 46.574 3 3.2836E-09 12994 20230619_1880_Aki_TMTPro18x_K_F1 116.94 107.28 11416 9338.5 9741.8 12501 9653.9 13681 12368 8294.8 15466 14099 16558 17309 18772 15303 12133 17713 21752 18707 10543 8575.1 10056 12368 10140 13614 12398 9020.8 15617 14049 17029 17357 18779 15981 13014 17800 20699 17769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76009000 2373 730 2258 4362;4363 3605 3605 1 9606 Homo sapiens -0.03382666848574445 ASGVAVSDGVIK Acetyl (Protein N-term) 1143.6136 0.61355299 3495 V9HWI5;P23528;E9PP50;B4E112;E9PS23 HEL-S-15;CFL1 Cofilin-1 yes no 1 0 0 4.6 2.24 1 1 2 1 1 1 2 1 53.389 53.441 2 6.4407E-13 15663 20230619_1882_Aki_TMTPro18x_K_F3 111.61 96.525 1184900 941160 1021200 1137700 1001500 1134300 1195100 1161000 1218700 1446500 1413900 1527900 1750200 1295100 1414000 1609200 1398500 1487500 1094200 863410 1051500 1132900 1047500 1148000 1194800 1192100 1249400 1448400 1456800 1539100 1758000 1360900 1444000 1604800 1338800 1413800 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 21383000000 2374 3495 2259 4364;4365;4366;4367;4368;4369;4370;4371;4372;4373 3606;3607;3608;3609;3610;3611;3612;3613;3614 3608 9 9606 Homo sapiens 0.04749075952304338 ASGVGLPGGSLPIK Unmodified 1251.7187 0.71868677 1113 B4DND5;A0A8I5KX76;O75112;V5T7C5;B4DGP4;A0A0S2Z501;O75112-5;C9JWU6 LDB3;OPN4 LIM domain-binding protein 3 yes no 0 0 0 2.5 0.5 1 1 56.032 56.06 3 3.86E-05 16835 20230619_1882_Aki_TMTPro18x_K_F3 81.904 48.107 28351 27275 33345 44632 47492 46960 38167 41939 43767 49197 41912 36117 46907 37020 39204 50038 52356 45452 26283 25092 33729 43629 47909 47188 39207 43374 44267 48931 43263 37314 47346 38868 40783 49784 49919 43245 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53230000 2375 1113 2260 4374;4375 3615 3615 1 9606 Homo sapiens 0.1028961714871457 ASGVQVADEVCR Acetyl (Protein N-term) 1331.614 0.6139637 3684 V9HWA6;P60981;F6RFD5 HEL32;DSTN Destrin yes no 1 0 0 1 0 1 45.824 45.824 2 7.246400000000001E-41 12619 20230619_1880_Aki_TMTPro18x_K_F1 218.55 210.33 20762 19931 18202 19465 24899 29390 25580 30001 37095 35327 26458 35430 42096 35562 25336 38492 47948 38514 19199 18238 18818 19840 25393 28983 26099 30716 36753 35430 28371 35932 41701 36837 27371 38599 45592 36615 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 673930000 2376 3684 2261 4376 3616 3616 1 9606 Homo sapiens -0.03857872390176453 ASGVSAAAPGER Unmodified 1071.5309 0.530886 1587 A0A5H1ZRP4;Q8WX92-2 NELFB Negative elongation factor B yes no 0 0 0 3.5 0.5 1 1 32.904 32.968 2 6.2828E-05 6713 20230619_1883_Aki_TMTPro18x_K_F4 126.71 109.19 28563 17810 38622 44488 57788 64271 40026 52432 49014 39481 57142 64757 47463 49787 54163 23206 65011 65934 26449 16528 38715 42921 58024 63154 41711 54004 49709 41373 57885 64004 49133 50453 55379 26245 62104 62168 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28974000 2377 1587 2262 4377;4378 3617;3618 3618 2 9606 Homo sapiens -0.0020182105588446575 ASGVTCLYFVEEGQR Unmodified 1714.7985 0.79847001 2954 F2Z2W7;Q8IZ69;Q8IZ69-2;A0A994J4Q5 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes no 0 0 0 5 0 1 55.84 55.904 3 0.0035714 16246 20230619_1885_Aki_TMTPro18x_K_F5 70.47 59.683 27205 21481 21518 25288 22691 23977 24564 24135 28671 24002 26856 25948 26872 25431 25128 25705 30006 23785 25107 19701 22370 25210 23538 24357 24786 24652 28887 24335 27635 26242 27366 26248 25851 25725 28619 22635 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24993000 2378 2954 2263 4379 3619 3619 1 9606 Homo sapiens -0.03033729030289578 ASGVTVNDEVIK Acetyl (Protein N-term) 1272.6561 0.65614609 4013 Q549N0;Q9Y281;F8WDN3;G3V2U0 CFL2 Cofilin-2 yes no 1 0 0 2 0 1 53.549 53.577 2 4.5669E-05 15955 20230619_1881_Aki_TMTPro18x_K_F2 78.934 54.115 90045 70010 75040 96266 76909 91754 89252 85550 95676 114720 109650 119090 132380 101010 112200 131730 113580 117360 83121 64319 77642 94948 80159 92956 89483 88646 97785 114470 112900 120060 133340 106440 114630 131030 108690 111610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357850000 2379 4013 2264 4380 3620 3620 1 9606 Homo sapiens 0.030724262898502275 ASHPEDPASVVEAR Unmodified 1463.7005 0.70047052 4662 Q9UHL4;R4GMR2 DPP7 Dipeptidyl peptidase 2 yes no 0 0 0 2 0 1 36.928 36.989 3 4.2121E-09 8489 20230619_1881_Aki_TMTPro18x_K_F2 164.92 118.19 29534 16332 32351 33914 46363 40356 44796 45193 49348 46356 54786 54489 50978 42201 46450 43516 54414 53075 27275 15114 32843 32865 46910 40424 45392 45855 50220 47023 55782 54516 51927 44022 47734 44258 51977 50315 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63891000 2380 4662 2265 4381 3621 3621 1 9606 Homo sapiens -0.012831695639761165 ASHSAVDITK Unmodified 1027.5298 0.52982336 2679 B7Z4J7;F5H039;B7Z2B5;Q9NQX3;Q9NQX3-2;B7Z374;B2RDJ7;G3V582;H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 6 0 1 36.491 36.551 3 9.6361E-05 8162 20230619_1886_Aki_TMTPro18x_K_F6 130.63 100.89 59796 28092 66949 70624 62368 62843 65560 62489 77371 60162 77437 73263 70115 57832 73757 44895 77185 69586 55199 26114 67355 67646 65176 64069 66305 63850 78069 61350 79109 73225 71947 59522 74957 46808 73764 65860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70346000 2381 2679 2266 4382 3622 3622 1 9606 Homo sapiens 0.01715964575214457 ASHTAPQVLFSHR Unmodified 1449.7477 0.74769548 3234 Q53R19;O15144;A0A024R408;Q9BXV5;H7C3F9 ARPC2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 2.5 0.5 1 1 35.402 35.459 4 6.549E-11 7749 20230619_1882_Aki_TMTPro18x_K_F3 182.25 165.87 70382 44725 80953 85082 119560 105300 101980 103950 100120 70194 86243 71251 64417 59995 107970 53544 72920 66531 65071 41301 81934 82806 120390 104900 103780 105370 101450 72813 88179 71947 68507 61917 106780 54824 70064 63077 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 180330000 2382 3234 2267 4383;4384 3623;3624 3624 2 9606 Homo sapiens 0.040811544976804726 ASIGQSPGLPSTTFK Unmodified 1489.7777 0.77765821 4074 Q5VT52-3;Q5VT52;Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes no 0 0 0 2.5 0.5 1 1 53.524 53.565 3 0.011653 15748 20230619_1882_Aki_TMTPro18x_K_F3 63.31 48.044 90083 75718 84789 93922 85496 108260 98290 103170 108240 93264 98415 99520 102470 88634 115440 110690 103830 107470 83271 69467 86660 93537 89217 108230 98687 105470 109280 94999 101670 100420 105070 92939 116490 110720 99481 102100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 145830000 2383 4074 2268 4385;4386 3625 3625 1 9606 Homo sapiens 0.052360486523411964 ASIHEAWTDGK Unmodified 1213.5728 0.57275081 387;1069 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;H9KV75;B7Z565;Q86TX4;B4DFY0;F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;B4E337 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 no no 0 0 0 6.5 1.12 1 1 1 1 43.086 43.152 3 6.8478E-05 10849 20230619_1885_Aki_TMTPro18x_K_F5 103.21 87.948 286270 193080 285450 317110 294740 360210 334360 327540 326970 340240 365670 455770 377000 323450 291420 329810 376970 453780 264410 177880 290440 310390 306660 359950 334670 337320 335160 346550 374390 452470 380390 338440 302790 338150 360390 429410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 167910000 2384 387;1069 2269 4387;4388;4389;4390 3626;3627 3626 2 9606 Homo sapiens -0.02549265367360931 ASILDEYENSLSR Acetyl (Protein N-term) 1537.726 0.72601657 590 A0A024R9R3;Q9P253;H0YMC9;H0YLM6 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes no 1 0 0 1 0 1 64.667 64.667 2 9.163299999999999E-36 20392 20230619_1880_Aki_TMTPro18x_K_F1 206.48 196.21 4114.4 2998.7 3939.7 2690.4 3211.3 3986.5 3936.7 4916.4 5260.2 4761.5 5176.8 4975.6 5894.6 4236.1 4377.7 6647 6168.5 5286.8 3800.6 2745 3998.6 2766.3 3418.9 3954.5 3971.8 4947.9 5278.9 4826.1 5343.1 5022.3 5917.9 4522.7 4589.3 6557.6 5878.6 5039.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11262000 2385 590 2270 4391 3628 3628 1 9606 Homo sapiens -0.02133739832174797 ASILNTWISLK Unmodified 1244.7129 0.71287311 3489 P22234;P22234-2;D6RF62 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 5.5 0.5 1 1 64.013 64.059 3 0.0034624 19937 20230619_1886_Aki_TMTPro18x_K_F6 72.289 53.046 310970 265760 243620 229220 300680 280710 224040 253460 288600 131030 114690 90000 120420 99407 263910 100150 97864 80576 287110 243060 253690 235460 305660 279670 232390 257450 283100 138050 126260 93693 129430 102300 255750 100100 95121 76802 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 933080000 2386 3489 2271 4392;4393 3629 3629 1 9606 Homo sapiens 0.10030518637040586 ASINMLR Unmodified 803.43236 0.43235793 3473 P18124;A0A024R814;A8MUD9;C9JIJ5 RPL7 60S ribosomal protein L7 yes no 0 0 0 2 0.816 1 1 1 44.215 44.267 2 0.0077813 11794 20230619_1881_Aki_TMTPro18x_K_F2 122.5 23.999 1219700 956680 1132800 1044100 1157800 1367000 1284800 1212100 1346200 1000900 1047700 1001600 1100600 907930 1043100 1185200 1248700 1061100 1126900 876850 1158000 1052100 1204800 1354200 1289800 1243300 1355100 1023600 1091200 1014400 1119100 954260 1073800 1179300 1191500 1009900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1379200000 2387 3473 2272 4394;4395;4396 3630;3631 3631 2 9606 Homo sapiens 0.022779041654075627 ASISYFK Unmodified 814.4225 0.42250475 4516 Q9H4L7;Q9H4L7-2;D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 0 0 0 2 0 1 51.102 51.147 2 0.073323 14965 20230619_1881_Aki_TMTPro18x_K_F2 81.119 45.239 179030 133600 151910 166010 147680 199980 170100 165700 209270 198050 185360 213630 197960 175050 174690 208920 222060 234290 165240 122630 156640 165400 154750 198760 171410 172530 210060 198950 192030 214730 200640 183640 180850 210710 212090 222210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140950000 2388 4516 2273 4397 3632 3632 1 9606 Homo sapiens 0.007870394316682905 ASITPGTILIILTGR Unmodified 1524.9239 0.92392852 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3;F8VZ45;U3KQR5;F8VR69 RPL6 60S ribosomal protein L6 yes no 0 0 0 7.5 0.5 1 1 66.199 66.221 3 3.7067E-33 20414 20230619_1888_Aki_TMTPro18x_K_F8 244.71 214.97 61136 42479 62328 53472 37235 50739 54412 44101 62214 49542 40601 47468 58981 51211 54054 66303 45575 61209 56487 39007 62791 53084 41202 51344 54110 45710 62065 49766 43541 48420 59386 53493 54659 66063 43796 58134 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 564970000 2389 680 2274 4398;4399 3633;3634 3634 2 9606 Homo sapiens 0.18246350888284724 ASLACGPMVK Unmodified 1032.5096 0.50962197 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2 0 1 47.903 47.974 3 0.0021564 13504 20230619_1881_Aki_TMTPro18x_K_F2 87.149 58.75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2390 3881 2275 4400 3635 3635 1 9606 Homo sapiens -0.005332456805717811 ASLAETDKITLEVAK Unmodified 1587.872 0.87195252 3566 P38606-2;P38606;A0A994J738;B7Z2V6 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 1 7 0 1 55.165 55.226 3 2.1421E-07 15806 20230619_1887_Aki_TMTPro18x_K_F7 121.45 101.07 251040 289510 319810 266440 273330 206240 317090 261740 175750 288250 306340 116640 125860 90876 453570 73616 64069 46632 233250 264650 318020 270650 287400 214940 313030 264410 192500 284280 299650 125590 149090 93889 431880 74022 64946 44641 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 440210000 2391 3566 2276 4401 3636 3636 1 9606 Homo sapiens 0.10153142683816441 ASLASLPPLHVAK Unmodified 1302.766 0.76597131 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;E7EWF7 DCTN1;DKFZp686I0746 Dynactin subunit 1 yes no 0 0 0 4 0 1 52.914 52.933 3 0.0035518 15322 20230619_1883_Aki_TMTPro18x_K_F4 79.466 67.619 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2392 1717 2277 4402 3637 3637 1 9606 Homo sapiens 0.1266989641969758 ASLCISTK Unmodified 878.45315 0.45315295 261 A0A024R3T8;P09874;B4E0E1;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 1.5 0.5 2 2 45.847 45.887 2;3 0.0007105 12524 20230619_1881_Aki_TMTPro18x_K_F2 110.22 41.835 367380 277340 336290 327450 356600 365180 361100 355380 418460 316510 308020 295350 356820 260930 301050 335020 395680 322470 339310 254420 344400 327190 368840 366290 365600 362700 418490 321500 323270 299770 359850 274420 312470 334680 377160 306680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 969860000 2393 261 2278 4403;4404;4405;4406 3638;3639 3639 2 9606 Homo sapiens 0.009064497543931793 ASLDSVFSDK Unmodified 1067.5135 0.5135046 4124 Q6PCB5-2;Q6PCB5 RSBN1L Round spermatid basic protein 1-like protein yes no 0 0 0 5 0 1 55.795 55.859 3 0.018286 16193 20230619_1885_Aki_TMTPro18x_K_F5 55.314 38.682 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2394 4124 2279 4407 3640 3640 1 9606 Homo sapiens -0.017551613815157907 ASLDTSELER Unmodified 1119.5408 0.54078198 1384 A0A2X0SFJ0;O75962-4;O75962;E7EPJ7;O75962-5;O75962-2;A0A8V8TNC6;E7EWP2;D3DTD2;A0A1W2PRD7;Q7Z2K2 TRIO;tgat Triple functional domain protein yes no 0 0 0 2 0 1 43.802 43.885 2 5.4883E-06 11649 20230619_1881_Aki_TMTPro18x_K_F2 168 138.84 63947 47567 60487 68991 75118 89700 83777 89532 120080 74598 76569 85825 93417 70470 77000 90188 100680 102090 59070 43735 62027 68155 77222 89072 85038 91042 118410 76618 81389 86107 94016 74298 79963 90932 96111 96830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59143000 2395 1384 2280 4408 3641 3641 1 9606 Homo sapiens -0.014206778411562482 ASLEDAPVDDLTR Unmodified 1400.6783 0.6783381 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;A0A7P0T8C6;Q7Z2W4-3 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 0 1 0 1 51.037 51.037 2 1.4429E-05 14788 20230619_1880_Aki_TMTPro18x_K_F1 151.98 125.46 24442 22802 26027 25384 26157 28101 31250 30392 32027 28151 26238 29086 29699 31327 30585 32618 31257 32722 22633 20890 26308 25475 27277 28270 31234 30829 32352 28608 27377 29561 30289 32282 31134 32762 29910 31073 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21300000 2396 2740 2281 4409 3642 3642 1 9606 Homo sapiens -0.005973940323883653 ASLIEEDEPAEK Unmodified 1329.63 0.62999092 2225 B2R5U7 yes yes 0 0 0 1.5 0.5 1 1 48.793 48.825 3 7.114E-05 13877 20230619_1880_Aki_TMTPro18x_K_F1 114.93 94.272 297710 284810 344630 336960 469250 418450 517540 433850 410060 320410 364760 267100 291960 226920 457650 304480 287920 257670 275930 261050 348030 337210 477490 417560 515370 439240 421680 328320 373000 272700 307840 239580 452240 302630 276920 245340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 232630000 2397 2225 2282 4410;4411 3643;3644 3643 2 9606 Homo sapiens -0.021638876722818168 ASLLDDYQLPEILR Unmodified 1644.8723 0.87228688 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5;E7EWK3;H7C5F5 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 0 0 6 0 1 63.964 64.011 2 2.422E-08 19917 20230619_1886_Aki_TMTPro18x_K_F6 170.04 143.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2398 4503 2283 4412 3645 3645 1 9606 Homo sapiens 0.07564562403695163 ASLLQLTR Unmodified 900.53927 0.53926584 3158 K7EJH0;K7EMX1;K7EJV2;K7ESQ2;Q8NBT2;B4E086 SPC24 Kinetochore protein Spc24 yes no 0 0 0 3.5 0.5 1 1 51.424 51.47 2 0.095016 14663 20230619_1883_Aki_TMTPro18x_K_F4 64.654 29.298 153910 123000 140770 141450 119720 158770 148070 148190 183710 98992 99348 84927 89392 74647 120720 106460 111590 92999 142190 112780 143810 141600 127080 158930 148740 150820 181470 102420 105440 86637 93075 79023 121610 105760 106730 88542 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104410000 2399 3158 2284 4413;4414 3646 3646 1 9606 Homo sapiens 0.08501777651406428 ASLLQNESTNEQLQIHYK Unmodified 2115.0596 0.059646729 1127 B3KM48;A0A0S2Z5H7;D6RAX7;Q9BT78;Q53FV3;D6RFN0;Q9BT78-2;D6RD63 COPS4 COP9 signalosome complex subunit 4 yes no 0 0 0 6.5 0.5 1 1 51.868 51.945 3 7.3778E-14 14755 20230619_1886_Aki_TMTPro18x_K_F6 157.11 142.15 25876 24893 26188 23906 19930 28196 29778 26505 26534 29829 33739 33414 39599 28369 32113 36429 33905 37001 23955 22775 26481 24304 21493 28147 29360 27291 27509 30069 34530 33601 39831 29880 32909 36497 32444 35126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38378000 2400 1127 2285 4415;4416 3647;3648 3647 2 9606 Homo sapiens 0.046719291504814464 ASLLQSDR Acetyl (Protein N-term) 930.47706 0.47705951 1123 A0A0S2Z5B8;A0A0S2Z5D4;Q9UJW0;Q9UJW0-3;A0A0S2Z5D5;E5RI97;B4DL03 DCTN4 Dynactin subunit 4 yes no 1 0 0 1 0 1 47.475 47.475 2 0.0001588 13333 20230619_1880_Aki_TMTPro18x_K_F1 124.34 103.64 6196.3 5792.6 5859.5 7128 6372.3 6351.3 9502.2 9001.4 9589.5 6141.5 7819.3 11609 8720.9 7664.7 8478.8 8567.6 10150 8663.8 5732.1 5311.9 5998.1 7080.7 6654.1 6543.1 9395.7 8941.5 9677.9 6525.4 8173.9 11393 8865.2 8076.8 8717.7 8602.2 9684.6 8233.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22977000 2401 1123 2286 4417 3649 3649 1 9606 Homo sapiens 0.009040065124281682 ASLMNDDFEK Unmodified 1168.507 0.50703901 1156 Q6FIA3;A0A0U1RR22;Q9UNF0-2;Q9UNF0;A0A024R4X1;B0QYG7;B0QYG8 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes no 0 0 0 3 0 1 52.594 52.653 2 0.0011385 15325 20230619_1882_Aki_TMTPro18x_K_F3 106.29 67.143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2402 1156 2287 4418 3650 3650 1 9606 Homo sapiens -0.07047422604546227 ASLPGVK Unmodified 670.40138 0.40137537 271 A0A024R3W7;P24534;C9JZW3 EEF1B2 Elongation factor 1-beta yes no 0 0 0 3.67 3.09 1 1 1 44.968 45.009 2 0.0092557 12278 20230619_1880_Aki_TMTPro18x_K_F1 119.57 41.817 1312400 816300 1117300 1279000 1420900 1559500 1316800 1310200 1732000 1405200 1640000 1703100 1762000 1421000 1372700 1299300 1946500 1726200 1210200 751850 1156600 1256300 1450200 1549400 1346400 1358400 1736400 1425000 1692200 1705000 1775900 1469500 1433700 1332000 1855300 1635800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2132499999.9999998 2403 271 2288 4419;4420;4421 3651;3652;3653 3651 3 9606 Homo sapiens 0.052990741228086335 ASLPTLGFTHFQPAQLTTVGK Unmodified 2213.1845 0.18445331 914 P30566;A0A7P0T9A7;A0A7P0Z472;A0A096LNY6;X5D8S6;A0A1B0GTJ7;A0A1B0GWJ0;B4DP46;A0A0A6YY92;Q71UA4;A0A7P0T8E4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;X5D2Z4;X5DP48;P30566-2;A8K4X6;A0A096LP92 ADSL Adenylosuccinate lyase yes no 0 0 0 5.5 0.5 2 2 61.634 61.685 3;4 1.3793E-11 18652 20230619_1885_Aki_TMTPro18x_K_F5 130.36 118.07 134900 116310 128090 138010 121240 140450 152290 129340 162090 153150 145010 143410 157090 128350 135380 160650 163400 178530 124720 106650 130660 137640 127360 141600 152000 133620 163900 153240 150100 145520 158910 134680 139740 161830 156170 169320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259200000 2404 914 2289 4422;4423;4424;4425 3654;3655 3654 2 9606 Homo sapiens 0.12638846357685907 ASLQETHFDSTQTK Unmodified 1591.7478 0.74781464 3336 O94888;C9JAT7;B4E126 UBXN7 UBX domain-containing protein 7 yes no 0 0 0 4.5 0.5 1 1 41.264 41.328 3 2.4279E-16 10126 20230619_1883_Aki_TMTPro18x_K_F4 198.87 184.78 271140 203210 234170 267750 285260 295600 294470 275920 285880 285060 336090 371450 305780 278420 300650 322310 400780 399710 250300 186630 241910 265390 292360 296370 296100 283610 293690 290150 341420 369910 313020 292560 311450 327440 382490 378830 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 342620000 2405 3336 2290 4426;4427 3656;3657;3658 3656 3 9606 Homo sapiens -0.02438935083614524 ASLSLAPVNIFK Acetyl (Protein N-term) 1300.7391 0.73908786 3756 V9HW96;P78371;F5GWF6;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 1 0 0 3 1.29 1 1 2 1 1 66.054 66.073 2 8.6547E-13 20965 20230619_1882_Aki_TMTPro18x_K_F3 134.91 83.564 419270 404650 430180 438890 382740 475550 460860 434380 482750 480900 466040 462240 493330 444650 499110 520550 482230 493520 388210 370600 435510 441070 403740 477180 460900 447960 490010 483030 480260 469570 503040 463140 506620 520370 461630 469000 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1590999999.9999998 2406 3756 2291 4428;4429;4430;4431;4432;4433 3659;3660;3661;3662;3663;3664;3665 3661 7 9606 Homo sapiens 0.1007478780850306 ASLSLIEK Unmodified 859.50148 0.50148335 1653 A0A7I2V351;A0A7I2V487;Q7Z726;A8K7D9;A0A7I2YQE1;P52292 KPNA2 Importin subunit alpha;Importin subunit alpha-1 yes no 0 0 0 7 0 1 53.2 53.27 3 0.0042161 15070 20230619_1887_Aki_TMTPro18x_K_F7 93.551 41.556 57450 45123 51975 54055 43466 56522 54910 56310 67427 62448 57103 52774 73243 44585 41019 74397 58340 49763 53067 41394 53148 53900 46228 56947 55099 57698 67584 62496 59704 53786 72604 47887 43416 72803 55593 47558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125470000 2407 1653 2292 4434 3666 3666 1 9606 Homo sapiens 0.06611266665959192 ASLTLFCPEEGDWK Unmodified 1651.7552 0.75520821 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 6.5 0.5 1 1 62.538 62.581 3 0.014189 19245 20230619_1886_Aki_TMTPro18x_K_F6 62.287 50.142 594820 473010 606770 570510 408200 439860 568800 525320 546140 666940 615070 769120 731700 577630 729760 733510 722940 734130 550010 433930 612130 566790 443710 456860 563860 534950 561090 669060 634230 769010 742620 610510 741730 734670 691850 697230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2783600000 2408 630 2293 4435;4436 3667 3667 1 9606 Homo sapiens -0.04459918807583563 ASLYNAVTIEDVQK Unmodified 1549.7988 0.79878758 183 A0A024R222;B4DHQ3;Q9Y617;A0A024R280;Q9Y617-2;B4DHX7 PSAT1 Phosphoserine aminotransferase yes no 0 0 0 6.5 0.5 1 1 57.577 57.639 3 8.5929E-12 17098 20230619_1886_Aki_TMTPro18x_K_F6 179.5 148.35 160640 112620 150020 131140 111340 156390 110510 113860 135240 202760 206580 330100 249550 235650 289650 274270 278350 408470 148330 103330 152570 131290 119040 155210 112440 121700 139560 203890 211450 325650 255360 248250 293160 282500 267340 386070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 615140000 2409 183 2294 4437;4438 3668;3669 3668 2 9606 Homo sapiens 0.045880139612108906 ASLYPCPETPQER Unmodified 1546.7086 0.70859237 1862 Q93050-3;Q93050;Q93050-1;A0A994J3Z0;K7EN36;K7ENA1;Q5CZH6;Q53ET5;Q53X12;A0A994J3Z9;A0A994J3Z4;A0A994J735;A0A994J6N3;A0A994J728;A0A994J4L1;K7EPG4;B7Z641;B7Z2A9;A0A994J473;K7ERA6;A0A994J6N0;A0A994J4L9;A0A994J731;B7Z2J9 ATP6V0A1;DKFZp686N0561 V-type proton ATPase 116 kDa subunit a isoform 1;V-type proton ATPase subunit a yes no 0 0 0 4 0 1 44.691 44.735 2 0.00027486 11595 20230619_1883_Aki_TMTPro18x_K_F4 125.23 110.66 20215 18265 20443 23532 18163 16696 20500 22165 20886 25753 26513 28027 32884 25045 21450 34014 28515 31432 18706 16759 20726 23245 19078 17539 20565 22368 21508 25886 27214 28259 32798 26415 22474 33853 27235 29871 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33009000 2410 1862 2295 4439 3670 3670 1 9606 Homo sapiens -0.042893586388345284 ASMQPIQIAEGTGITTR Oxidation (M) 1788.904 0.90399771 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 1 0 7 0 1 48.934 49.021 3 2.8334E-06 13123 20230619_1887_Aki_TMTPro18x_K_F7 100.45 84.905 136880 96259 123950 132580 148540 156620 154000 151210 161440 152590 162160 161310 173610 143890 151380 151890 181290 157820 126360 88473 127410 131190 152440 156410 155180 154880 164090 154410 166840 162760 175760 149440 155960 152870 173010 149930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145440000 2411 349;3906 2296 4440 3671 3671 206 1 9606 Homo sapiens 0.04110187095307083 ASMQPIQIAEGTGITTR Unmodified 1772.9091 0.90908309 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 8 0 1 54.558 54.625 3 3.9196E-09 15554 20230619_1888_Aki_TMTPro18x_K_F8 124.99 111.22 262000 196810 287830 287890 251190 265480 250700 265410 324720 361260 343340 279940 343830 294170 295080 365160 381940 368710 242340 180970 289620 282920 263760 270140 255310 273680 327620 357500 350900 288570 348670 306850 306090 365790 364510 350210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 348940000 2412 349;3906 2296 4441 3672 3672 1 9606 Homo sapiens 0.05354490957938651 ASMQQQQQLASAR Oxidation (M) 1461.6994 0.69942466 4732 X6R700;Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3;A0A087X1B7 CHTOP Chromatin target of PRMT1 protein yes no 0 1 0 6.75 0.433 1 3 31.851 31.924 2;3 1.3841E-08 6489 20230619_1886_Aki_TMTPro18x_K_F6 165.51 144.47 14101 10881 15550 14872 18487 20238 19043 16598 19542 14294 14434 15950 15196 12927 15641 14289 17291 14788 13045 9996.2 15717 14758 18976 19970 19175 17152 19665 14632 15100 16009 15510 13505 15979 14372 16511 14050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94602000 2413 4732 2297 4442;4443;4444;4445 3673;3674;3675 3673 2886 3 9606 Homo sapiens -0.012957072045082896 ASMQQQQQLASAR Unmodified 1445.7045 0.70451004 4732 X6R700;Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3;A0A087X1B7 CHTOP Chromatin target of PRMT1 protein yes no 0 0 0 7.5 0.5 1 1 36.18 36.207 2 7.8081E-17 7949 20230619_1888_Aki_TMTPro18x_K_F8 228.93 198.53 46123 32948 39969 42469 42680 52317 52765 46362 61509 38844 45202 40246 49205 36125 40573 48692 58572 45143 42568 30259 41184 42229 44451 51997 52851 47592 61430 39756 47280 40706 49673 38085 42440 48506 55775 42964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54196000 2414 4732 2297 4446;4447 3676 3676 1 9606 Homo sapiens -0.0005140334187672124 ASNGDAWVEAHGK Unmodified 1340.6109 0.61092723 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z1V7;H0Y8K0;A0A3B3ITI4 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 3.5 0.5 1 1 40.554 40.604 3 6.0297E-08 9780 20230619_1883_Aki_TMTPro18x_K_F4 153.85 138.64 255630 219360 290230 249080 302150 314200 308660 323860 326090 329180 349540 332490 368160 276130 342310 322270 343080 290630 236710 201060 291860 250160 312800 313090 311530 330170 332250 332410 358260 335510 373620 289250 348440 321470 327890 276570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 676710000 2415 1488 2298 4448;4449 3677 3677 1 9606 Homo sapiens -0.04575379452694506 ASNLENSTYDLYTIPK Unmodified 1827.8891 0.88905915 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITV3;A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 6.5 0.5 1 1 59.222 59.279 3 1.3657E-08 17849 20230619_1886_Aki_TMTPro18x_K_F6 139.65 126.92 196130 156030 196690 215060 181900 220160 203140 209050 247580 348880 333410 331260 384080 322840 274850 389060 368970 465770 181320 143340 199670 212350 190900 221930 205110 218040 253630 344440 340090 336790 385200 337010 287270 393800 352790 441220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 773970000 2416 3647 2300 4450;4451 3678;3679 3679 2 9606 Homo sapiens 0.008230184990225098 ASNLQDLVYK Unmodified 1149.603 0.60298831 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 8 0 1 54.869 54.936 3 0.00028768 15686 20230619_1888_Aki_TMTPro18x_K_F8 113.69 98.714 171200 128480 158440 150300 134690 163520 144550 172140 200320 177340 199040 185560 190080 179510 180430 211780 189380 195160 158130 117850 161600 150250 142310 164530 147050 175310 200770 179250 203770 187930 193940 186960 184320 211290 181150 185520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182180000 2417 128 2301 4452 3680 3680 1 9606 Homo sapiens 0.03417093297844076 ASNVTNK Acetyl (Protein N-term) 774.38718 0.38718187 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;P07910-4;D3DPI2;G3V5X6;G3V3K6;G3V251;G3V575;G3V555;B4DQQ2;P07910-3;B4DSU6;Q6PKD2;P0DMR1;A0A0G2JNQ3;A0A0G2JPF8;B7ZW38;B2RXH8;O60812;B4DMJ1;G3V4M8;G3V2H6;Q569J8 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL3;HNRNPCL2;HNRNPCL1;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 1 0 0 3 0 1 36.38 36.435 2 0.0042651 8160 20230619_1882_Aki_TMTPro18x_K_F3 86.866 81.426 45241 25531 53041 64124 76835 84086 53205 76869 66139 42773 75875 87386 62165 68371 77891 27760 82210 84274 41811 23707 53645 61748 77291 83255 55497 78068 66922 46429 76896 85956 64725 68990 78880 31887 78630 79438 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90695000 2418 2226 2302 4453 3681 3681 1 9606 Homo sapiens -0.009036230961442016 ASPAGTAGGPGAGAAAGGTGPLAAR Unmodified 1962.9872 0.98715049 3824 Q12962;A0A8I5KQU8 TAF10 Transcription initiation factor TFIID subunit 10 yes no 0 0 0 4.5 3.5 1 1 42.114 42.115 3 5.4276E-35 10325 20230619_1888_Aki_TMTPro18x_K_F8 208.08 196.01 52707 38765 47528 50684 47686 58172 49402 51890 64578 50594 53478 57312 57426 48968 52137 58005 61948 61676 48667 35602 48735 50295 49650 58090 50190 53410 64451 51438 55586 57594 58250 51266 53682 58334 59175 58542 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94244000 2419 3824 2303 4454;4455 3682;3683 3683 2 9606 Homo sapiens 0.04417639867574508 ASPATQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVK Unmodified 3725.988 0.98799192 3807 Q07666;B2R7B5;Q07666-3 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 0 0 0 2.5 0.5 1 1 62.644 62.663 4 0.001016 19849 20230619_1881_Aki_TMTPro18x_K_F2 64.148 60.601 16717 13083 15552 14956 14480 15625 16272 17811 17503 19063 20178 16325 18563 16368 18191 20180 18151 18839 15445 11996 15874 14969 15172 15803 16353 18069 17873 19110 20481 16717 18980 17083 18514 20138 17372 17905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235690000 2420 3807 2304 4456;4457 3684 3684 1 9606 Homo sapiens 0.2340374446152964 ASPDPDLDPDLSR Unmodified 1396.647 0.64703797 2393 B3KRB8;Q9BQC3-3;Q9BQC3 DPH2 Diphthamide biosynthesis protein 2 yes no 0 0 0 1 0 1 47.557 47.557 2 1.2033E-07 13345 20230619_1880_Aki_TMTPro18x_K_F1 161.51 140.54 26052 20033 31864 29278 26052 29570 27419 29926 32131 35262 36748 32296 41630 31334 28066 42818 38234 38550 24125 18418 31779 28813 27553 29878 27744 30683 32672 35256 37650 32923 41666 32978 29421 42558 36486 36659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20776000 2421 2393 2305 4458 3685 3685 1 9606 Homo sapiens -0.035419670664850855 ASPESQEPLIQLVQAFVR Unmodified 2011.0738 0.07384023 4053 Q5SRE5;Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog yes no 0 0 0 2 0 1 66.906 66.913 3 1.0667E-18 21545 20230619_1881_Aki_TMTPro18x_K_F2 178.03 148.05 3866.2 2738.9 4332.2 3270.6 3231.6 4957.3 3569.4 3966.2 3931.4 4341.9 3819.8 3538.9 4552.1 3223.5 3959.4 4762.4 3994.9 3029.3 3575.5 2513.5 4340.2 3283.4 3463 4858.4 3594.9 4126.9 3984.5 4343.3 3954.6 3620.6 4590 3417.7 4042.7 4662.3 3815.3 2899.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10319000 2422 4053 2306 4459 3686 3686 1 9606 Homo sapiens 0.10874626369400175 ASPNVEAPQPHR Unmodified 1301.6476 0.64764709 1543 P50851;P50851-2;A0A494BZW2;A0A494C1L5;E9PEM5;A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes no 0 0 0 4.5 0.5 1 1 31.79 31.86 3 1.7873E-07 6350 20230619_1885_Aki_TMTPro18x_K_F5 134.49 114.06 19652 10799 18787 20039 25188 22406 22200 24435 25680 20219 25793 25030 24033 24971 24093 21008 27485 26403 18128 9976 19253 19497 25539 22521 22671 24703 25949 20815 26379 25194 24620 25535 24667 21492 26257 25025 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28923000 2423 1543 2307 4460;4461 3687;3688 3688 2 9606 Homo sapiens 0.008889171638884363 ASPPSLEQPYLTHR Unmodified 1594.8104 0.81035532 2133 B0UZZ8;A8K9A1;O15213;B4DP15;A0A1U9X8W1;A0A1U9X8U7;A0A1U9X8U3;B4DNI0;A8K806 C6orf11;WDR46 WD repeat-containing protein 46 yes no 0 0 0 7 0 1 44.214 44.297 3 3.9714E-47 11015 20230619_1887_Aki_TMTPro18x_K_F7 262.64 243.96 105280 77239 88499 95773 98572 110740 110180 103170 154210 90372 99944 85611 112390 98046 94142 107610 130060 113480 97157 70899 91500 95391 102040 110660 111700 105600 152230 92053 105520 87662 113530 101250 98095 108280 123980 107780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47932000 2424 2133 2308 4462 3689;3690 3690 2 9606 Homo sapiens 0.03674255775217716 ASPSLERPEK Acetyl (Protein N-term) 1154.5932 0.5931519 3863 Q13601;Q13601-2;B4DMS5 KRR1 KRR1 small subunit processome component homolog yes no 1 0 1 3 0 1 38.761 38.815 2 0.0019003 9069 20230619_1882_Aki_TMTPro18x_K_F3 56.916 31.744 56169 49529 51447 60663 70773 74655 69286 65513 82176 71811 74229 78241 85573 70773 65092 85554 89452 83779 51927 45426 53003 60515 71941 74231 70313 67735 82669 72468 77035 78892 86018 74035 68003 85578 85312 79613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100540000 2425 3863 2309 4463 3691 3691 1 9606 Homo sapiens 0.022039052924583302 ASPSPQPSSQPLQIHR Unmodified 1728.8907 0.89073091 4548 Q9HC35;B5MBZ0;B6EXY3;C1PHA1;J7MA22;C1PHA0;B3XZL9;B3XZM0;A9YLN7 EML4;EML4-ALK variant 7;EML4-ALK;EML4-ALK variant 6;EML4/ALK fusion Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 0 1 0 1 37.662 37.662 3 9.5677E-34 9069 20230619_1880_Aki_TMTPro18x_K_F1 201.3 185.76 53008 39762 50850 54374 54361 66271 52790 52217 59484 74903 64573 68648 76069 62047 60372 72008 60862 70291 48973 36533 51912 53842 56207 65766 53545 54916 60538 74282 66531 69704 76495 64767 61762 72077 58293 66746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164670000 2426 4548 2310 4464 3692 3692 1 9606 Homo sapiens 0.055441170982931 ASPSTAGETPSGVK Unmodified 1287.6307 0.63065962 2898;4664 E7ERK9;Q9UI10;Q9HBP7;F8W8L6;Q9UI10-3;Q9UI10-2;B4DUP5;Q59FC8 EIF2B4 Translation initiation factor eIF-2B subunit delta no no 0 0 0 4.5 0.5 1 1 38.903 38.97 3 0.00044421 9099 20230619_1885_Aki_TMTPro18x_K_F5 90.412 72.976 40910 28790 46029 45802 59211 70983 54838 56201 64053 51511 65139 69078 66542 52890 58768 48750 66784 68560 37835 26507 46540 45153 60382 69480 55835 58295 64731 52871 66864 68749 67473 54909 60279 50202 63833 64902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156970000 2427 2898;4664 2311 4465;4466 3693 3693 1 9606 Homo sapiens -0.001650482325885605 ASQCPHIVR Unmodified 1066.5342 0.53419724 3603 P49137-2;P49137 MAPKAPK2 MAP kinase-activated protein kinase 2 yes no 0 0 0 7 0 1 28.739 28.849 3 0.015416 5007 20230619_1887_Aki_TMTPro18x_K_F7 62.823 46.152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2428 3603 2312 4467 3694 3694 1 9606 Homo sapiens 0.003591505171470999 ASQDPFLQHVNK Unmodified 1382.6943 0.69426293 1999 A8K0P8;Q68CQ4 DIEXF Digestive organ expansion factor homolog yes no 0 0 0 7 0 1 45.033 45.119 3 0.050188 11367 20230619_1887_Aki_TMTPro18x_K_F7 45.183 11.298 337310 263040 280460 329230 366100 391100 378930 388050 429040 394760 384130 390800 442390 339010 387310 437630 407700 404060 311380 241420 291230 327820 373900 390720 382780 396720 432550 398510 398830 395220 446800 356750 396210 436190 389860 384140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157970000 2429 1999 2313 4468 3695 3695 1 9606 Homo sapiens 0.018223569951715035 ASQDPFPAAIILK Unmodified 1369.7606 0.76055158 4376 V9HWH0;Q96KB5;Q96KB5-2;E5RFX4 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase yes no 0 0 0 1.5 0.5 1 1 62.599 62.604 3 0.00025339 19561 20230619_1880_Aki_TMTPro18x_K_F1 95.264 55.347 85177 69222 74856 91179 63815 85980 74191 69074 78672 93550 68785 72837 92989 82245 79096 91559 71403 77457 78679 63554 76841 90161 67587 86913 74360 72433 79648 92618 72136 75162 93486 85008 80321 91050 68434 73697 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173320000 2430 4376 2314 4469;4470 3696 3696 1 9606 Homo sapiens 0.09046172837201993 ASQEPSPKPGTEVIPAAPR Unmodified 1931.0112 0.011239973 3105 Q96CP2;I3L1Y9;I3L4I0 FLYWCH2 FLYWCH family member 2 yes no 0 0 1 6.5 0.5 1 1 43.305 43.391 3 1.6038E-10 10973 20230619_1886_Aki_TMTPro18x_K_F6 138.46 126.75 43119 45740 42072 43607 49549 51346 56429 43825 45372 50621 56391 49567 50102 43373 63315 44548 49650 39728 39937 41833 42953 44343 50993 51205 56133 45509 47301 50757 57060 50161 51941 44996 63289 44553 47568 37821 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85391000 2431 3105 2315 4471;4472 3697;3698 3697 2 9606 Homo sapiens 0.08297480301234827 ASQLVGIEK Unmodified 943.53385 0.53384611 562 A0A8V8TNE2;A0A024R9A9;Q9NPD8;A0A8V8TN93 UBE2T Ubiquitin-conjugating enzyme E2 T yes no 0 0 0 7.67 0.471 1 2 48.993 49.069 2 0.00044533 13141 20230619_1887_Aki_TMTPro18x_K_F7 154.05 71.602 171500 130220 161990 187490 145780 178860 155720 151060 207070 232640 211420 189560 239070 176440 152510 244440 229080 183120 158440 119710 165260 184420 153230 180810 158070 158480 208430 229460 217630 194020 238890 186100 161320 240860 218120 174740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 349480000 2432 562 2316 4473;4474;4475 3699;3700 3699 2 9606 Homo sapiens 0.059820540689429436 ASQNRDPAATSVAAAR Acetyl (Protein N-term) 1626.8074 0.80739521 950 A0A0A0MSE8;Q5TZN3;B2R4U3;O00762-4;O00762;K4DI81;A0A087WVK1;O00762-3 UBE2C Ubiquitin-conjugating enzyme E2 C yes no 1 0 1 2.5 0.5 1 1 31.651 31.722 2 3.7870000000000004E-33 6363 20230619_1881_Aki_TMTPro18x_K_F2 110.84 79.416 852.24 0 1080 834.49 0 0 852.1 1071.9 719 0 1044.2 1477.4 1239.8 1332.9 873.12 0 2186.4 2100.2 784.87 0 1060.5 763.3 0 0 807.6 993.46 747.35 0 1067.3 1426.1 1244.8 1310.2 961.42 0 2078.6 1972.8 1 0 1 1 0 0 1 1 1 0 1 1 1 1 1 0 1 1 65525000 2433 950 2317 4476;4477 3701;3702 3701 2 9606 Homo sapiens 0.01906380650416395 ASQNSFR Unmodified 808.38277 0.3827652 3406 P07954-2 FH Fumarate hydratase, mitochondrial yes yes 0 0 0 6 0.816 1 1 1 29.895 29.966 2 0.01935 5825 20230619_1886_Aki_TMTPro18x_K_F6 106.04 26.926 44734 23448 69460 72526 119280 114130 90711 115700 88484 31168 60662 59405 40765 47910 82561 19169 70545 52579 41461 21884 69259 69655 118950 112180 93082 115730 88949 36941 62763 58666 44318 48249 82190 21812 67489 49652 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 22673000 2434 3406 2318 4478;4479;4480 3703;3704;3705 3704 3 9606 Homo sapiens -0.029090875190490806 ASQPDLVDTPTSSKPQPK Unmodified 1894.9636 0.96362108 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 1 7 0 1 44.149 44.232 4 0.019981 11013 20230619_1887_Aki_TMTPro18x_K_F7 62.916 53.167 108750 91031 104350 100930 115750 112560 111970 113970 130360 130660 135700 123990 139150 100860 126100 138170 134000 115070 100540 83427 106490 101330 119130 113050 113720 116750 132020 130940 139040 125440 141160 106820 128950 136930 128000 109610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55616000 2435 3588 2319 4481 3706 3706 1 9606 Homo sapiens 0.0519378131036774 ASQQEIQHIVNR Unmodified 1421.7375 0.73752473 1957 A5YKK6;A5YKK6-2;A5YKK6-3;A5YKK6-4;B4DTM8;H3BU44;H3BT18 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 6 0 1 39.237 39.325 3 8.3627E-10 9239 20230619_1886_Aki_TMTPro18x_K_F6 177.41 137.06 54178 40031 46529 51499 56395 61734 58707 60322 68185 65289 70786 69253 74783 59792 54349 77808 84789 92646 50008 36758 48083 51195 57884 61612 59353 61840 69032 65840 72639 69835 75232 62988 57437 78645 80886 87810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59948000 2436 1957 2320 4482 3707 3707 1 9606 Homo sapiens 0.04352546772452115 ASQQINALR Unmodified 999.54614 0.54614213 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9;H0YIM7 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 0 0 7 0 1 37.892 37.955 2 0.0056136 8447 20230619_1887_Aki_TMTPro18x_K_F7 91.867 53.075 34298 28789 32907 38486 41288 38807 32434 33620 42613 30897 43715 35729 34763 30806 35848 34057 43541 37386 31709 26433 33687 38057 41955 39114 33545 34646 42825 31546 44351 35925 35830 32108 36846 34367 41543 35496 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21108000 2437 4170 2321 4483 3708 3708 1 9606 Homo sapiens 0.04635090531996866 ASQSQGIQQLLQAEK Acetyl (Protein N-term) 1669.8635 0.8635131 2957;502 F2Z307;O95670;A0A7I2V2N1;A0A7I2YQH3;O95670-2;A0A024R883;O75348;A0A7I2V4K4;A0A7I2V3Q6;A0A7I2V375 ATP6V1G2-DDX39B;ATP6V1G2;ATP6V1G1 V-type proton ATPase subunit G 2;V-type proton ATPase subunit G 1 no no 1 0 0 5.5 0.5 1 1 62.288 62.337 3 4.1947E-14 18953 20230619_1885_Aki_TMTPro18x_K_F5 75.669 62.006 593660 518860 605140 627760 484980 602690 569650 560260 606210 718630 728490 693190 707710 613330 662030 768980 750400 815840 549270 475830 612120 624770 516000 610330 571020 579710 620850 716820 740550 702290 720870 643630 679500 772520 717580 774160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 785950000 2438 2957;502 2322 4484;4485 3709;3710;3711 3709 3 9606 Homo sapiens 0.055375887672653334 ASQSRPNSSALETLGGEK Unmodified 1830.9072 0.90716883 3331 O94804 STK10 Serine/threonine-protein kinase 10 yes yes 0 0 1 7 0 1 42.684 42.759 3 0.00034755 10401 20230619_1887_Aki_TMTPro18x_K_F7 73.918 52.045 89155 71662 79034 79938 73623 86615 81002 80663 111110 67363 56208 48393 78055 51365 67040 77497 61436 59879 82353 65689 81050 80168 77222 86948 82153 82463 109210 68322 61155 50170 78363 54332 68112 76439 58825 57066 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22159000 2439 3331 2323 4486 3712;3713 3712 2 9606 Homo sapiens 0.024951534737056136 ASQTLPQATMNHR Oxidation (M) 1469.7045 0.70451004 3607 P49454 CENPF Centromere protein F yes yes 0 1 0 8 0 1 31.008 31.019 3 0.0036152 5997 20230619_1888_Aki_TMTPro18x_K_F8 70.563 48.69 3353.4 1577.5 2700.3 2759.4 2452.5 2726.2 2384.4 3287.7 5355.5 2328.1 2712.7 2580.9 2561.8 3766 3410.4 3692.4 3207.1 3735.8 3087.6 1457.4 2793.3 2688.5 2573.8 2769.8 2500.5 3291.9 5171.2 2419.9 2900.8 2653.4 2672.2 3834.5 3443.7 3713.8 3074.1 3545.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3072500 2440 3607 2324 4487 3714 3714 2289 1 9606 Homo sapiens -0.011554033419088228 ASQYNIR Unmodified 850.42972 0.42971539 2301 J3JZZ9;B2RBP3;Q8TBC4;Q8TBC4-2;F8W8D4;B7Z5F6 UBE1C;UBA3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 7 0.816 1 1 1 34.46 34.498 2 0.0052105 7089 20230619_1887_Aki_TMTPro18x_K_F7 142.64 46.126 188690 105890 204270 214790 313360 326860 233370 266350 296260 129340 153240 136590 134250 112880 196790 91277 197980 123910 174250 97943 207870 209170 314630 320420 241860 272460 292090 138610 163140 137610 140670 116140 198450 94263 188910 117610 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 131690000 2441 2301 2325 4488;4489;4490 3715;3716;3717 3716 3 9606 Homo sapiens -0.001482279679066778 ASRDEIFAQSK Unmodified 1250.6255 0.62551466 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 1 6 0 1 40.734 40.826 3 0.00032983 9889 20230619_1886_Aki_TMTPro18x_K_F6 107.53 69.916 272900 233190 233080 258590 310520 297140 280830 281280 313180 322340 363620 309370 332420 285280 322930 364930 386710 355380 252110 213690 241340 259620 315380 297390 285910 289510 319300 323180 368970 314140 339870 299280 332290 364790 369170 337760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276570000 2442 3549 2326 4491 3718 3718 1 9606 Homo sapiens 0.010226926954601367 ASRDPSPIQDGNEDMK Oxidation (M) 1774.7792 0.77919113 3951 Q16566;B2R747 CAMK4 Calcium/calmodulin-dependent protein kinase type IV yes no 0 1 1 2 0 1 36.179 36.237 3 0.020022 8193 20230619_1881_Aki_TMTPro18x_K_F2 62.055 56.846 19969 16997 18022 16295 12564 13300 15144 14735 17511 23304 24944 19471 23675 18092 18351 26001 25142 21605 18454 15557 18372 16496 13555 13728 15211 15186 18019 22965 25140 19917 23938 19133 19171 25732 23966 20580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27694000 2443 3951 2327 4492 3719 3719 2619 1 9606 Homo sapiens -0.07720730111850571 ASREEILAQAK Unmodified 1214.6619 0.66190017 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 1 6.5 0.5 1 1 40.488 40.568 3 0.001201 9482 20230619_1887_Aki_TMTPro18x_K_F7 91.961 59.463 294720 247340 286190 260360 299250 288900 304920 306760 363300 356120 378520 351540 384930 311170 330510 410890 394530 369720 272500 226570 291410 262490 309710 290620 309010 313400 367450 357120 387680 355920 390010 327610 341010 408770 376700 351690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 562930000 2444 148 2328 4493;4494 3720;3721 3721 2 9606 Homo sapiens 0.06315569592175052 ASSAGVLVS Unmodified 789.42323 0.42323303 2200 B1AQP2;Q9UHV9 PFDN2 Prefoldin subunit 2 yes no 0 0 0 4.5 0.5 1 1 46.765 46.824 2 0.0019899 12403 20230619_1885_Aki_TMTPro18x_K_F5 110.63 91.273 90295 69952 80420 88063 88205 101270 92663 93118 124940 97576 115370 116280 115980 87735 87747 96493 130950 110210 83390 64206 82682 87609 91234 101200 94162 95820 124960 98994 118800 116210 116980 91964 92142 97576 124730 104610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 367560000 2445 2200 2329 4495;4496 3722 3722 1 9606 Homo sapiens 0.020098340807180648 ASSAQSGGSSGGPAVPTVQR Acetyl (Protein N-term) 1841.8868 0.88676774 1229 A0A140VK49;Q7KZF4;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 no no 1 0 0 4 0 1 40.679 40.721 2 1.2537E-36 9817 20230619_1883_Aki_TMTPro18x_K_F4 162.93 147.66 4356.2 3627.5 4713.5 4841.2 8073.5 7505.2 7374.9 6849.4 8191 8479.3 6459.4 8010.3 9427.7 7039.1 7712 10119 8019.5 8964.1 4031.2 3330.7 4809.6 4823.1 8088.8 7374.6 7495.7 7082.9 8242.1 8468.2 6849.8 8116.8 9440.6 7459.4 7902.8 10047 7676.6 8522.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184710000 2446 1229 2330 4497 3723 3723 1 9606 Homo sapiens -0.0005001718607218208 ASSASAPSSTPTGTTVVK Unmodified 1647.8315 0.83154427 250 A0A024R3K9;A0A024R3N2;Q6P4R8-3;Q6P4R8;Q6P4R8-2 NFRKB Nuclear factor related to kappa-B-binding protein yes no 0 0 0 8 0 1 41.656 41.653 3 0.00017333 10150 20230619_1888_Aki_TMTPro18x_K_F8 83.966 70.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2447 250 2331 4498 3724 3724 1 9606 Homo sapiens 0.03354176293373712 ASSDIQVK Acetyl (Protein N-term) 888.45526 0.45526144 2660 B5BU83;P16949;A2A2D0;Q96CE4;A0A140VJW2;P16949-2 STMN1 Stathmin yes no 1 0 0 2.5 0.5 1 1 44.822 44.9 2 0.00075014 12063 20230619_1881_Aki_TMTPro18x_K_F2 83.614 62.46 997150 544180 1156100 1082800 1423400 1740500 1111100 1335400 1296500 1095300 1716000 1848800 1567200 1537400 1614700 732400 1834500 1859200 921330 503280 1164800 1056800 1450200 1699100 1145500 1385100 1325800 1143200 1735500 1830300 1607700 1554000 1648100 815130 1753300 1753800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6237099999.999999 2448 2660 2332 4499;4500 3725;3726 3725 2 9606 Homo sapiens 0.006572017638518446 ASSGAGDPLDSK Acetyl (Protein N-term) 1145.52 0.52004654 172 K7EPV0;A0A024R1X4;Q9Y2R0 COA3;hCG_16955 Cytochrome c oxidase assembly factor 3 homolog, mitochondrial yes no 1 0 0 1 0 1 47.081 47.081 2 0.00014424 13171 20230619_1880_Aki_TMTPro18x_K_F1 78.655 65.602 106040 77764 94015 109770 108800 132460 110880 113300 153120 124160 130070 143790 110590 100070 132570 134380 135050 131290 97898 71481 96836 108460 112100 131710 112960 117360 152580 125550 133810 143550 114590 106430 134560 134310 129160 124740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71589000 2449 172 2333 4501 3727 3727 1 9606 Homo sapiens -0.04689268220818121 ASSGLLYPLER Unmodified 1204.6452 0.64518747 315 A0A024R4Z6;Q08945 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 7.5 0.5 1 1 54.041 54.11 3 0.00086208 15310 20230619_1888_Aki_TMTPro18x_K_F8 82.278 60.814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2450 315 2334 4502;4503 3728;3729 3729 2 9606 Homo sapiens 0.05105068706234306 ASSLISLLK Unmodified 930.57498 0.57498264 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;Q2TU89;E9PKF8 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 4.5 0.5 1 1 62.783 62.809 3 0.0003986 19215 20230619_1885_Aki_TMTPro18x_K_F5 116.05 43.503 38609 28964 33595 36583 33942 46605 33287 39696 46951 44352 38973 39894 40867 37091 37046 54337 44502 48657 35643 26589 34573 36441 35325 46180 34043 41127 46758 44452 40446 40627 41499 39251 38249 53952 42536 46259 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148070000 2451 3752 2335 4504;4505 3730 3730 1 9606 Homo sapiens 0.10691815108418723 ASSLNENVDHSALLK Unmodified 1596.8107 0.81074925 4395 Q96SB3 PPP1R9B Neurabin-2 yes yes 0 0 0 6 0 1 46.422 46.505 3 2.3438E-14 12367 20230619_1886_Aki_TMTPro18x_K_F6 186.43 152.04 86690 73915 103590 94617 103880 112470 107240 96868 120380 114070 106010 114540 117430 99605 105670 111190 113480 130920 80311 67831 103770 94097 107910 112020 108340 100520 121370 114410 110010 115680 118940 103890 108130 112640 108630 124080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57191000 2452 4395 2336 4506 3731 3731 1 9606 Homo sapiens 0.03621630704446943 ASSQSAPSPDVGSGVQT Unmodified 1573.722 0.72199382 4231 Q8N490-2 yes yes 0 0 0 3 0 1 42.643 42.709 2 0.00065003 10801 20230619_1882_Aki_TMTPro18x_K_F3 85.813 61.658 10137 9642.5 11779 9503.4 7487.1 11700 10404 10309 14405 13956 13978 14172 12767 13249 11767 12003 13675 13564 9395.6 8824.2 11755 9648.6 8224.5 11630 10450 10723 14428 13921 14307 14335 13038 13623 12089 12172 13065 12867 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36378000 2453 4231 2337 4507 3732 3732 1 9606 Homo sapiens -0.04191829325918661 ASSSAGNLGVLIPVIAVLTR Unmodified 1937.131 0.13096118 2623 D3DX33;B4DYG5;Q4LE69;P42356 hCG_1999854;PIK4CA variant protein;PI4KA Phosphatidylinositol 4-kinase alpha yes no 0 0 0 7.5 0.5 1 1 66.851 66.872 3 5.2165E-05 20702 20230619_1888_Aki_TMTPro18x_K_F8 85.855 72.427 4188.9 3372.5 3719.6 4646.6 4446.4 3348.4 3959.8 3841.6 3559.9 5387 4544.4 4528.3 6144.1 3690.8 4932.9 4922.6 5025.1 7291.5 3869.4 3098 3831.5 4569.5 4535.1 3500.3 4010.4 3934 3701.1 5330.4 4686.3 4605.4 6150.7 3913 5043 5057.8 4822.8 6892.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10839000 2454 2623 2338 4508;4509 3733 3733 1 9606 Homo sapiens 0.19988093645793015 ASSSGFPGAR Unmodified 935.44609 0.44609374 3843 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 yes yes 0 0 0 7.5 0.5 1 1 35.613 35.643 2 0.033975 7740 20230619_1888_Aki_TMTPro18x_K_F8 67.414 45.732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2455 3843 2339 4510;4511 3734;3735 3735 2 9606 Homo sapiens -0.024211468018052074 ASSSGNDDDLTIPR Acetyl (Protein N-term) 1488.6692 0.66922997 3782 Q658N3;Q53F47;Q01658 DKFZp666G145;DR1 Protein Dr1 yes no 1 0 0 1 0 1 47.606 47.606 2 1.252E-17 13351 20230619_1880_Aki_TMTPro18x_K_F1 187.42 171.19 18710 16716 17445 19681 25113 23967 19601 22749 24204 17298 19010 17512 17502 16434 20628 19105 21394 16909 17301 15325 17948 19688 25311 23893 20230 23168 24176 17793 19680 17747 18074 17118 20953 19041 20431 16100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160580000 2456 3782 2340 4512 3736 3736 1 9606 Homo sapiens -0.055557873886982634 ASSSLGLQDFDLLR Unmodified 1520.7835 0.78347187 2308 B2RCZ4;B5BUK7;P41743 PRKCI Protein kinase C;Protein kinase C iota type yes no 0 0 0 7.5 0.5 1 1 62.703 62.734 2 1.6695E-12 19077 20230619_1887_Aki_TMTPro18x_K_F7 193.49 120.64 82521 71736 79996 97364 77959 90864 86187 86213 95366 107660 104940 106700 122580 95107 97818 128650 106910 117810 76315 65867 81550 96094 81405 92250 86738 89000 97107 107600 107980 108000 123310 100290 100580 128040 102270 111970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152740000 2457 2308 2341 4513;4514 3737 3737 1 9606 Homo sapiens 0.0439114716405129 ASSSSASSAGALESSLDRK Unmodified 1809.8704 0.87044898 4074 Q5VT52-3;Q5VT52;Q5VT52-5;Q5VT52-4 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes no 0 0 1 6 0 1 44.148 44.239 3 7.0838E-86 11347 20230619_1886_Aki_TMTPro18x_K_F6 340.4 313.58 61177 53180 60649 60389 70994 72741 75727 70684 79785 63033 80460 76725 84911 63915 71155 91960 86773 81322 56587 48742 61809 60580 72996 72595 76192 72162 81007 64554 82682 76926 85824 67843 73573 91300 82835 77373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120840000 2458 4074 2342 4515 3738 3738 1 9606 Homo sapiens -0.002091431428652868 ASSSTLESGTLR Unmodified 1207.6044 0.60444487 2461 Q96JS0;Q9H4D2;E9PQR4;B4DE99;P50607;P50607-2 TUB Tubby-like protein;Tubby protein homolog yes no 0 0 0 4.5 0.5 1 1 38.6 38.667 2 0.00013243 8992 20230619_1885_Aki_TMTPro18x_K_F5 139.86 106.06 26340 21548 23260 21004 23763 17122 23366 20238 21494 28472 32328 29746 29341 23355 30146 31752 31309 25773 24333 19728 23863 21234 24559 17725 23538 20694 22459 28351 32516 29934 30062 24741 30712 31438 29906 24563 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28521000 2459 2461 2343 4516;4517 3739 3739 1 9606 Homo sapiens 0.008946825959583293 ASSSTVPLGFHYETK Acetyl (Protein N-term) 1664.8046 0.80460124 4463 Q9BXK5;Q86T62;E9PDD6;Q9BXK5-2;F2Z2C3;A0A087WW80;F6VJB4;Q8IZP5;A0A0A0MR90 BCL2L13;DKFZp451F173 Bcl-2-like protein 13 yes no 1 0 0 6 0 1 53.004 53.081 2 0.033514 15220 20230619_1886_Aki_TMTPro18x_K_F6 44.299 38.328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2460 4463 2344 4518 3740 3740 1 9606 Homo sapiens -0.0012088752707768435 ASSSVPPATVSAATAGPGPGFGFASK Acetyl (Protein N-term) 2360.1648 0.16484008 2390 F8VNT5;F8VU68;B3KQV3;Q8TBX8-2;Q8TBX8;F8VVB2;Q8TBX8-3 PIP4K2C Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma yes no 1 0 0 1 0 1 62.365 62.365 3 0.007335 19470 20230619_1880_Aki_TMTPro18x_K_F1 55.061 45.312 11368 6507.3 8167.4 8397.6 9798.7 10776 9104.8 11221 12023 9905.3 9974 9997.2 11802 11790 13827 13480 10099 12312 10467 5982.7 8587.4 8358 10044 10724 9314.9 11388 12000 10090 10417 10216 12092 12183 13818 13456 9714 11699 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50979000 2461 2390 2345 4519 3741 3741 1 9606 Homo sapiens 0.03916425556190006 ASSTSPVEISEWLDQK Unmodified 1775.8578 0.85775902 1075 P13804;A0A0S2Z3L0;A0A0S2Z3M4;P13804-2;H0YLU7;A0A8I5KVL5;A0A8I5KYH4;A0A8I5KYP7;A0A8I5KUF3;H3BV91;H0YKF0;A0A8I5KT03;A0A8I5KUR2;A0A8I5KVC9;H0YK49 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes no 0 0 0 5.5 0.5 1 1 62.333 62.382 3 0.079961 19019 20230619_1885_Aki_TMTPro18x_K_F5 37.438 31.14 254120 219840 270220 285910 244500 296020 294780 321510 330690 283440 282990 224520 267770 236990 325260 340440 299200 278760 235190 201770 272920 283460 257520 299030 295520 325560 332800 286770 291690 231480 276580 249450 328390 336960 286380 265500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 916040000 2462 1075 2346 4520;4521 3742 3742 1 9606 Homo sapiens 0.0008644546489904315 ASSTSTPEPTR Unmodified 1132.536 0.53603095 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A8Q3WLE0;Q6ZSB8;Q6ZT55 ENAH Protein enabled homolog yes no 0 0 0 3 0.816 1 1 1 28.897 28.978 2 0.00092506 5368 20230619_1881_Aki_TMTPro18x_K_F2 105.98 69.58 4832.9 2002.4 7208.3 7886.8 8783.3 11443 9632.7 9196.9 8141.6 5255.9 10482 12963 10205 8451.4 11081 2763.3 10938 8957 4473.2 1884.4 7157.2 7511.8 9022.4 11229 9617.6 9450.1 8452.8 5759.1 10654 12639 10460 8569.4 11196 3245.1 10453 8449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37540000 2463 918 2347 4522;4523;4524 3743 3743 1 9606 Homo sapiens -0.024935619839197898 ASSTVPVSAAGSANETPEIPDNVGDWLR Acetyl (Protein N-term) 2881.373 0.37299496 4325 Q96B49 TOMM6 Mitochondrial import receptor subunit TOM6 homolog yes yes 1 0 0 3.75 0.829 2 1 1 64.721 64.749 3 7.4394E-29 20429 20230619_1882_Aki_TMTPro18x_K_F3 151.06 140.56 4616.4 3623.8 4096.3 4742.3 4215.8 4904.1 5753 5321.6 4355.2 7180.7 7366.5 6550.7 7981.4 5477.5 7970.8 6206.3 9152 7686 4263.6 3327.3 4211.7 4699 4409 4955.5 5669.3 5457.5 4646.6 7130.8 7440.4 6641.5 8116.3 5734.1 8159.5 6313.3 8735 7289.9 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88136000 2464 4325 2348 4525;4526;4527;4528 3744;3745;3746 3744 3 9606 Homo sapiens 0.007563378920167452 ASSVIFGLK Unmodified 920.53312 0.53311783 4493 Q9H0C8;F8SNU6 ILKAP;ILKAP2 Integrin-linked kinase-associated serine/threonine phosphatase 2C yes no 0 0 0 3.5 0.5 1 1 58.54 58.557 2 0.010226 17818 20230619_1882_Aki_TMTPro18x_K_F3 84.743 43.797 32510 26502 29780 26814 26084 30295 26885 27742 33781 30451 30691 24223 27978 28805 32836 31206 27748 28299 30040 24271 30401 27123 27439 30324 27291 28584 33894 30460 31483 25057 28900 29669 33016 31169 26602 26908 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73810000 2465 4493 2349 4529;4530 3747 3747 1 9606 Homo sapiens 0.06967259419911898 ASSVISTAEGTTR Unmodified 1278.6416 0.64155866 2857 Q3V6T2;D6W5D1;Q3V6T2-2;A0A2R8Y7B1;Q3V6T2-3;Q3V6T2-4;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y885;H7C2C6;H0Y470;Q9ULK8;A0A2R8Y5D7;B4DSN0;B3KW94;H0Y7K3;A0A2R8Y4Z5 CCDC88A;KIAA1212 Girdin yes no 0 0 0 5 0 1 43.096 43.177 2 5.1475E-06 10839 20230619_1885_Aki_TMTPro18x_K_F5 140.24 119.37 26356 20139 19683 25001 35434 33078 29223 26692 34631 35129 38618 29733 31623 25879 36520 30766 41678 30337 24309 18483 20812 24941 35369 32707 29976 27933 35141 34894 39077 30317 32727 27091 37297 30836 39749 28861 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11503000 2466 2857 2350 4531 3748 3748 1 9606 Homo sapiens 0.013383541416942535 ASSVTTFTGEPNTCPR Unmodified 1723.7835 0.78354822 3639 Q53FN1;P52943;H0YFA4;P52943-2 CRIP2 Cysteine-rich protein 2 yes no 0 0 0 6.5 0.5 2 2 44.434 44.519 2;3 4.0416E-42 11451 20230619_1886_Aki_TMTPro18x_K_F6 341.51 307.64 170980 138520 182290 180330 200060 209290 202820 211010 231680 262590 270710 286130 277310 249090 255690 279280 290260 299390 158170 127170 184480 179080 206370 209490 205320 216770 236130 263260 276310 288060 281880 259720 262420 281240 277440 284110 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 776970000 2467 3639 2351 4532;4533;4534;4535 3749;3750;3751 3749 3 9606 Homo sapiens -0.04939220898245367 ASTALSNEQQAR Unmodified 1274.6215 0.62149192 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 3.5 0.5 1 1 33.339 33.399 2 1.4087000000000001E-24 6878 20230619_1883_Aki_TMTPro18x_K_F4 265.36 240.51 38297 18780 47822 44999 74806 86593 52691 65177 55960 37017 62808 81058 64870 59210 58932 26170 73340 68532 35396 17436 48176 43768 74981 83831 54557 67264 57032 40284 64335 79442 65887 60061 60632 29322 69998 64660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 50027000 2468 3440 2352 4536;4537 3752;3753 3753 2 9606 Homo sapiens -0.004833967982449394 ASTEATELLQNIR Unmodified 1444.7522 0.75217174 3220 O14578;O14578-4;A0A7I2V365;A0A7I2V4A6;A0A7I2V4I0;A0A7I2V692;A0A7I2V4H7;H7BYJ3;O14578-3;A0A7I2YQJ8 CIT Citron Rho-interacting kinase yes no 0 0 0 5 0 1 57.031 57.091 3 0.013993 16755 20230619_1885_Aki_TMTPro18x_K_F5 47.606 32.293 15824 11577 12815 16055 12278 14062 15534 15229 19303 16490 15459 16813 16724 14157 17306 17782 18116 20481 14599 10639 13281 15814 12900 14394 15586 15517 19293 16611 16111 16959 17059 14889 17636 17959 17342 19416 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30496000 2469 3220 2353 4538 3754 3754 1 9606 Homo sapiens 0.04758574129959925 ASTNAMLISAGLPPLK Oxidation (M) 1598.8702 0.87017839 3246 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 1 0 3.5 0.5 1 1 59.474 59.49 3 0.00048746 18107 20230619_1883_Aki_TMTPro18x_K_F4 73.279 58.589 87634 71432 91376 103600 96276 109130 106950 116110 109230 107260 112780 116080 120480 102960 111800 128670 113460 129440 81059 65653 92670 102020 99891 110040 107330 117880 111310 109110 115920 117040 122310 107990 114030 128880 108650 122880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278940000 2470 3246 2354 4539;4540 3755 3755 1912 1 9606 Homo sapiens 0.09469810394261913 ASTNAMLISAGLPPLK Unmodified 1582.8753 0.87526376 3246 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 4.5 0.5 1 1 62.264 62.291 3 2.6098E-08 19293 20230619_1883_Aki_TMTPro18x_K_F4 134.14 93.986 79006 52248 82604 84014 76650 89517 85880 77721 95690 99024 95896 93044 95053 84184 91146 118410 101090 96300 72995 48125 83536 82261 80367 89784 86370 80817 96975 98768 98331 94473 96889 88894 93454 117130 96589 91718 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 308910000 2471 3246 2354 4541;4542 3756;3757 3756 2 9606 Homo sapiens 0.10714114256870744 ASTNLQDQLEK Unmodified 1245.6201 0.62009493 478 Q9NUL3;Q4LE57;Q9NUL3-2;Q9NUL3-4;Q9NUL3-7;Q9NUL3-3;Q9NUL3-6;Q9NUL3-8;A0A024R7X7;Q2TBD5;E7EVJ4;E7EPX0;A8K276;E5RJN7;B7Z1P6;E7EVI1;E5RJ67 STAU2;STAU2 variant protein Double-stranded RNA-binding protein Staufen homolog 2 yes no 0 0 0 4 0 1 46.608 46.651 3 0.00013044 12471 20230619_1883_Aki_TMTPro18x_K_F4 117.21 81.556 107140 88746 108750 115320 108140 155010 135840 117430 179370 129480 136020 139120 156900 112260 113030 152150 144290 132180 99087 81462 110440 114750 113450 152760 136610 122930 178380 130650 142470 139910 157280 118850 117640 151030 137670 125800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64873000 2472 478 2355 4543 3758 3758 1 9606 Homo sapiens 0.007109691129699058 ASTPYIEK Unmodified 907.4651 0.46509784 2345 B3KM73;D3DVL7;B4DU42;Q969Z0-2;Q969Z0;C9J7P5;C9J5A2;C9J347;C9IZN7;C9J618 TBRG4 Protein TBRG4 yes no 0 0 0 6.5 0.5 1 1 44.43 44.516 2 0.01262 11458 20230619_1886_Aki_TMTPro18x_K_F6 106.91 53.741 129960 95674 127010 137390 144450 156100 137570 148590 196200 167030 212200 197880 212310 176250 171400 156190 248300 213920 120080 87960 129580 135520 148570 156220 140970 152790 197050 168840 216790 198740 214760 181560 179140 160580 236590 202700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74466000 2473 2345 2356 4544;4545 3759 3759 1 9606 Homo sapiens 0.007663897692395949 ASTSDYQVISDR Unmodified 1340.6208 0.62082322 2034 A8K3Z5;Q8NFH5-2;Q8NFH5;Q8NFH5-3 NUP35 Nucleoporin NUP53 yes no 0 0 0 3 0 1 42.09 42.152 2 4.83E-13 10536 20230619_1882_Aki_TMTPro18x_K_F3 211.68 172.06 71748 56193 77087 85567 92800 98646 91668 89727 101340 113490 116180 117970 132870 106290 96250 141520 132210 120680 66366 51686 78152 84120 95073 98533 92802 92916 103370 113540 119200 119200 133320 111880 100750 140350 126070 114880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85451000 2474 2034 2357 4546 3760 3760 1 9606 Homo sapiens -0.03586236237970297 ASTTLDIK Unmodified 847.4651 0.46509784 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 6.5 0.5 1 1 46.245 46.331 2 0.00010866 11904 20230619_1887_Aki_TMTPro18x_K_F7 179.21 107.19 1193700 779020 1029300 1097800 1222200 1294200 1100000 1135800 1484700 1007400 1213700 1234200 1042800 982700 1170900 941800 1584200 1173100 1101100 716440 1062400 1084700 1251700 1290000 1128100 1167900 1478200 1032800 1250800 1233800 1077200 1019600 1209700 960920 1508900 1113300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 761670000 2475 630 2358 4547;4548 3761;3762 3762 2 9606 Homo sapiens 0.03526389769228899 ASTVVAVGLTIAAAGFAGR Acetyl (Protein N-term) 1772.9785 0.97848328 1145 A0A0S2Z5X1;Q96DA6;A0A8I5KQT8;G5E9V2;F2Z3A7 DNAJC19 Mitochondrial import inner membrane translocase subunit TIM14 yes no 1 0 0 7 0 1 70.999 71.017 2 0.00031777 22452 20230619_1887_Aki_TMTPro18x_K_F7 53.754 35.89 1189.1 787.26 895.8 1170.3 0 944.93 0 894.62 2104.5 1464.5 1426.9 756.02 0 1261.1 0 890.25 0 1123 1096 724.41 922.77 1146.6 0 968.66 0 930.15 1993.8 1430.8 1426.5 817.71 0 1260 0 911.09 0 1060.1 1 1 1 1 0 1 0 1 1 1 1 1 0 1 0 1 0 1 694850 2476 1145 2359 4549 3763 3763 1 9606 Homo sapiens 0.1229131796906131 ASVASEVSTTSSTSKPPTGR Unmodified 1948.9702 0.97016302 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B3KME6;Q6AZE1 CEP170 Centrosomal protein of 170 kDa yes no 0 0 1 8 0 1 39.864 39.853 3 9.253E-55 9422 20230619_1888_Aki_TMTPro18x_K_F8 228.63 213.67 90332 70904 77766 89487 71165 89307 84671 89845 88889 113450 136370 138470 146030 126950 119470 147170 143300 143060 83410 65078 80025 88835 74915 90309 84792 92388 92272 114100 138100 139090 147480 132360 123420 147260 136880 135920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46373000 2477 1960 2360 4550 3764 3764 1 9606 Homo sapiens 0.03363674471052036 ASVCAEAYNPDEEEDDAESR Unmodified 2255.8761 0.87606422 424 B3KY43;Q6DHZ2;A0A024R712;P31323;Q75MP1 PRKAR2B cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 1 0 1 44.257 44.257 3 4.0934E-16 12003 20230619_1880_Aki_TMTPro18x_K_F1 154.26 150.1 18982 13326 20453 19014 22267 25897 22204 21495 27892 24627 23423 18703 28418 22554 24606 29414 33322 27631 17547 12253 20675 18820 22998 25554 22566 22339 27919 24561 24428 19418 28666 23515 25592 29332 31758 26284 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45220000 2478 424 2361 4551 3765 3765 1 9606 Homo sapiens -0.2016387720395869 ASVGECPAPVPVK Acetyl (Protein N-term) 1351.6806 0.6805867 3661 P56134;P56134-3;Q53FE1 ATP5J2 ATP synthase subunit f, mitochondrial yes no 1 0 0 3 0 1 51.948 52.014 2 0.00024574 15053 20230619_1882_Aki_TMTPro18x_K_F3 75.682 61.687 37275 31445 34204 42273 41467 40537 40225 46698 47873 48420 44903 47912 53210 35807 46228 56957 51077 53104 34450 28872 35152 41770 42439 41271 40881 47310 48256 48804 46593 48261 53653 38493 47458 56643 48837 50472 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70453000 2479 3661 2362 4552 3766 3766 1 9606 Homo sapiens 0.018813631717193857 ASVGFGGSCFQK Unmodified 1243.5656 0.56555694 3284 O60701;O60701-3;O60701-2 UGDH UDP-glucose 6-dehydrogenase yes no 0 0 0 2 0 1 50.66 50.712 3 5.0096E-06 14768 20230619_1881_Aki_TMTPro18x_K_F2 113.38 96.148 153990 115920 134740 140210 157360 167480 157850 159680 180850 148050 152770 175390 183820 165620 158330 211540 216390 204420 142170 106370 138840 139970 161690 167120 159830 163350 181780 151160 159580 176540 185570 173520 164940 211280 206390 194280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110690000 2480 3284 2363 4553 3767 3767 1 9606 Homo sapiens -0.04648321239415054 ASVGMYLISK Unmodified 1067.5685 0.56851706 3409 P08243-2;P08243;P08243-3;B4DY32;F8WEJ5 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 3.5 0.5 1 1 58.436 58.453 3 0.031548 17680 20230619_1883_Aki_TMTPro18x_K_F4 54.776 18.082 63299 49591 56161 55577 41331 53404 51604 51406 62658 64526 76930 87457 66407 56367 91842 61597 63882 75740 58460 45464 57418 55633 44478 54123 51820 53034 63750 65179 77920 86612 69273 59446 91238 62710 61474 71745 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49805000 2481 3409 2364 4554;4555 3768 3768 1 9606 Homo sapiens 0.0374355388537424 ASVILAGLGFTPK Unmodified 1272.7442 0.74417324 1135 B4DRU9;A0A0S2Z5L1;Q9NUQ8-2;Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes no 0 0 0 6 0 1 63.91 63.956 3 0.011327 19893 20230619_1886_Aki_TMTPro18x_K_F6 60.401 42.669 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2482 1135 2365 4556 3769 3769 1 9606 Homo sapiens 0.11871091671127942 ASVITQVFHVPLEER Unmodified 1723.9257 0.92571943 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JHZ8;C9JK79;C9JHS7;C9JT62 HDLBP Vigilin yes no 0 0 0 8 0 1 60.457 60.492 3 2.1227E-25 17967 20230619_1888_Aki_TMTPro18x_K_F8 230.97 200.24 263650 227770 240960 292160 232990 302890 299800 295510 265740 336740 289280 297290 339560 261040 251590 312830 304550 316640 243700 209020 246950 289820 244700 305170 297400 303520 274030 336720 297910 302230 340600 273400 260640 313570 290970 300660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 325840000 2483 292 2366 4557 3770 3770 1 9606 Homo sapiens 0.09271359906233556 ASVLFDTMQHHLALNR Unmodified 1851.9414 0.94138627 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 3.5 0.5 1 1 55.245 55.271 4 1.8647E-14 16321 20230619_1883_Aki_TMTPro18x_K_F4 181.26 150.15 51659 46990 53591 58120 40518 52540 53447 53022 52135 50756 55532 58807 54057 50533 60014 59205 60408 64513 47816 43097 54118 57711 43508 53547 53130 54103 53308 51654 56800 59059 55531 52840 60941 59658 57822 61203 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171300000 2484 630 2367 4558;4559 3771 3771 1 9606 Homo sapiens 0.04949323151640783 ASVPTIQDQASAMQLSQCAK Unmodified 2133.0194 0.019438173 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 4.5 3.5 1 1 54.967 55.033 3 3.0395000000000003E-30 15726 20230619_1888_Aki_TMTPro18x_K_F8 213.69 200.5 51656 38891 42309 51274 45927 52624 58915 53999 55589 53733 52276 49407 61265 52342 56205 61839 55586 57961 47670 35718 43877 50768 47782 53130 58525 55079 56697 54195 54180 50486 62000 54398 57239 61761 53206 55084 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107240000 2485 1292 2368 4560;4561 3772;3773 3773 2 9606 Homo sapiens -0.0017507683592157264 ASVSELACIYSALILHDDEVTVTEDK Acetyl (Protein N-term) 2919.4059 0.40593457 372 Q7Z612;A0A024R608;P05386 RPLP1 60S acidic ribosomal protein P1 yes no 1 0 0 5 0 1 67.651 67.694 3 1.5077E-08 21246 20230619_1885_Aki_TMTPro18x_K_F5 56.303 55.672 5089.2 2094.3 2980.3 5146.7 4625.6 3514.4 3650.3 5763.3 5205.3 5631.3 6025.8 4776.5 3869.1 5100.6 4827.6 5966.8 4526.6 4675 4675.1 1947.8 3237.7 4918.7 4644.6 3727.6 3790.1 5723.4 5248.8 5668.7 6041.2 4905.2 4074.4 5286.8 4882.7 5907.6 4335 4453.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18825000 2486 372 2369 4562 3774 3774 1 9606 Homo sapiens 0.023007838998637453 ASVSPMDEPVPDSESPIEK Oxidation (M) 2028.9198 0.91976693 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 1 0 1.5 0.5 1 1 50.039 50.069 3 0.0078972 14506 20230619_1881_Aki_TMTPro18x_K_F2 58.29 47.914 109560 94834 109590 125520 88665 97532 93054 96770 104380 122390 129230 117030 137780 115100 122580 147770 135270 141990 101350 87054 111080 123850 93880 100740 94029 99660 106780 122140 131700 119080 139610 120530 125760 147570 129350 134900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127510000 2487 630 2370 4563;4564 3775 3775 360 1 9606 Homo sapiens -0.053536159688974294 ASVSPMDEPVPDSESPIEK Unmodified 2012.9249 0.92485231 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 2 0 1 53.858 53.886 3 4.4714E-11 16162 20230619_1881_Aki_TMTPro18x_K_F2 142.94 118.23 37128 34608 39476 42006 33576 42682 38743 36373 46462 49307 44559 64370 53037 40471 52071 51787 60563 70443 34379 31732 39837 41820 35529 42958 39013 37968 46859 49579 46324 63758 53796 43174 53434 52896 57933 66673 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146210000 2488 630 2370 4565 3776 3776 1 9606 Homo sapiens -0.041093121062885984 ASVSQVEADLK Unmodified 1145.5928 0.59281755 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 4 0 1 52.066 52.089 3 2.0112E-06 14978 20230619_1883_Aki_TMTPro18x_K_F4 153.95 114.64 931460 790190 922690 948350 1052700 1287900 1173800 1218000 1445800 891800 966630 957130 958580 777450 1133000 919710 951990 1029500 861430 724690 940450 949300 1087700 1274400 1184500 1240000 1436500 921710 1014400 962950 986630 815750 1137900 928780 913140 976330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 473110000 2489 673 2371 4566 3777;3778 3778 2 9606 Homo sapiens 0.025844855726063543 ASVTVGGEQISAIGR Unmodified 1443.7682 0.76815616 3972 Q496C9;Q8TEA8;A0A2R8YCT7;A0A2R8Y6X2 DTD1 D-tyrosyl-tRNA(Tyr) deacylase;D-tyrosyl-tRNA(Tyr) deacylase 1 yes no 0 0 0 7.5 0.5 1 1 48.987 49.064 2 1.2648E-41 13139 20230619_1887_Aki_TMTPro18x_K_F7 276.47 249.79 333160 267290 303330 352310 254500 306340 315630 292510 299960 397360 373910 404840 419190 372080 343670 438760 409830 481910 307800 245410 310190 348110 270030 312900 314360 302810 309910 396030 382330 409400 422920 388440 355000 441950 391980 457000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3134499999.9999995 2490 3972 2372 4567;4568 3779 3779 1 9606 Homo sapiens 0.06402280366842206 ASVVPVK Acetyl (Protein N-term) 740.44324 0.44324019 2498 G3V325;B4DJ38;C9JJT5;P56134-4;P56134-2 ATP5J2-PTCD1;ATP5J2 ATP synthase subunit f, mitochondrial no no 1 0 0 4.5 0.5 1 1 49.602 49.657 2 1 NaN NaN 116150 105910 124510 100680 126510 133900 130740 145010 174940 149760 170420 170160 159280 156430 152060 164130 176870 173030 107540 96906 125670 102700 131360 133210 133000 147400 175440 151770 174560 171370 162740 162130 156190 165300 168960 164260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121490000 2491 2498 2373 4569;4570 0 9606 Homo sapiens 0.06263629811326155 ASWEERER Unmodified 1061.489 0.48902118 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 1.5 0.5 1 1 31.308 31.34 3 0.00082046 6139 20230619_1881_Aki_TMTPro18x_K_F2 131.44 93.353 77375 65835 71727 62631 93646 75458 75801 82240 78648 79714 76646 64130 76851 68260 71674 76955 95348 65211 71521 60254 73561 63770 94845 75605 77590 83426 79951 80213 78665 66002 78231 70722 74295 76536 90791 62173 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99351000 2492 3440 2374 4571;4572 3780 3780 1 9606 Homo sapiens -0.0392637674440266 ASWSSLSMDEK Oxidation (M) 1255.5391 0.53906742 3445 P13073;H3BN72;H3BNV9;Q86WV2;H3BPG0 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes no 0 1 0 4.5 0.5 2 2 49.607 49.663 2;3 0.00016415 13586 20230619_1885_Aki_TMTPro18x_K_F5 110.08 87.198 116100 94709 127660 132200 135020 159490 152230 145640 168710 139430 154490 153660 155380 135940 155210 144210 148450 152320 107440 87009 128890 130750 140170 158820 152980 149590 170270 141740 159240 154750 158560 141240 157400 145300 142130 144570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 424680000 2493 3445 2375 4573;4574;4575;4576 3781;3782 3782 2082 2 9606 Homo sapiens -0.07848054921419134 ASWSSLSMDEK Unmodified 1239.5442 0.5441528 3445 P13073;H3BN72;H3BNV9;Q86WV2;H3BPG0 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes no 0 0 0 6 0 1 53.794 53.871 2 1.4744E-30 15561 20230619_1886_Aki_TMTPro18x_K_F6 280.71 241.38 112310 98329 121360 127460 119410 171840 159560 165770 195700 133250 139600 175780 184800 154990 168410 161630 182570 181980 103970 90238 122630 126890 125590 170100 159610 168860 194900 137820 148120 175740 186420 160920 172270 163490 174540 172630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 435280000 2494 3445 2375 4577 3783 3783 1 9606 Homo sapiens -0.06603751058787566 ASYAEQLSMLK Unmodified 1239.6169 0.61692381 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;H0YFY6;Q96HN5;K4DIE0;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 4.5 3.5 1 1 57.821 57.847 2;3 6.97E-06 16939 20230619_1888_Aki_TMTPro18x_K_F8 175.15 128.99 106810 88412 101570 108010 113590 152610 119900 117230 141000 85758 79916 72284 86725 69111 103690 86793 86414 75534 98734 81105 103870 108020 117460 150030 121130 121350 139870 88091 85174 73953 89085 72350 104090 86369 82772 71902 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91735000 2495 349;3906 2376 4578;4579 3784;3785 3785 2 9606 Homo sapiens 0.006700027346369097 ASYAVSETIPK Unmodified 1164.6027 0.60265396 4578 Q9NQW7-4;Q9NQW7-3;Q5T6H7;B3KSI7;Q9NQW7-2;Q9NQW7;B4E2P4;B4DIS4 XPNPEP1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 7 0 1 48.751 48.837 2 0.00027427 13057 20230619_1887_Aki_TMTPro18x_K_F7 134.26 91.014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2496 4578 2377 4580 3786 3786 1 9606 Homo sapiens 0.026936735780054732 ASYDTLCVLDGDKDSVNCAR Unmodified 2257.9943 0.99434563 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;A0A994J583;A0A994J7K1 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 1 5 0 1 53.061 53.133 3 0.0026604 15116 20230619_1885_Aki_TMTPro18x_K_F5 69.747 60.464 17494 14630 19329 18118 20721 20488 19894 17918 19358 20504 18941 17515 19043 15135 17923 20302 18080 13390 16193 13422 19492 18045 21361 20488 20094 18557 19752 20491 19451 17840 19371 15960 18265 19929 17265 12808 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40427000 2497 1867 2378 4581 3787 3787 1 9606 Homo sapiens -0.08433176429207379 ASYDVSDSGQLEHVQPWSV Unmodified 2102.9545 0.95451296 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;Q8WTZ9;O14943;Q49A78;B1APP8 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 3.5 0.5 1 1 59.503 59.519 2 7.599E-10 18143 20230619_1883_Aki_TMTPro18x_K_F4 132.59 117.39 6438.3 4355.6 5524.4 7403.4 7302.9 6651.5 6814.8 6411.5 6687.9 7133.7 6326.8 13179 9954.4 7490 7992.4 8506.6 11246 12922 5939.9 4014.5 5724 7208.9 7421.2 6777.7 6894.6 6594.1 6817.5 7348.1 6714.7 12883 9948.7 7973.4 8343.5 8776.5 10740 12221 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9190000 2498 1831 2379 4582;4583 3788 3788 1 9606 Homo sapiens -0.052846120458980295 ASYGVSK Unmodified 710.3599 0.35990449 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRI6;A0A1W2PNG3 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 7.5 0.5 1 1 39.268 39.255 2 0.0073979 9174 20230619_1888_Aki_TMTPro18x_K_F8 125.5 49.47 402580 183880 626440 583940 1114100 1164900 690610 1054000 653020 159460 265360 224330 185620 177140 506130 137880 253340 177820 372940 171870 624660 563610 1106000 1130200 720500 1058800 650790 211510 287520 224080 207290 182110 492990 142660 244310 168750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225870000 2499 3776 2380 4584;4585 3789;3790 3790 2 9606 Homo sapiens -0.006861066365217994 ASYTPSPAR Unmodified 948.46649 0.46649483 4335 Q96DF8 DGCR14 Protein DGCR14 yes yes 0 0 0 7 0 1 33.331 33.415 2 0.0052876 6690 20230619_1887_Aki_TMTPro18x_K_F7 86.953 54.733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2500 4335 2381 4586 3791 3791 1 9606 Homo sapiens -0.009799761420026698 ASYVAPLTAQPATYR Unmodified 1607.8308 0.83075641 1111 A0A0S2Z4Z0;Q96PK6;Q59GV2 RBM14 RNA-binding protein 14 yes no 0 0 0 2.5 0.5 2 2 49.841 49.908 2;3 1.7041E-10 14413 20230619_1881_Aki_TMTPro18x_K_F2 148.85 123.47 144810 110770 154250 150320 150980 183970 171960 168710 173710 132700 133480 125440 141880 125130 170020 167470 152240 151310 133920 101760 155870 148990 157720 183030 172230 172440 175160 135910 139260 127820 145920 131290 171400 166720 145830 143890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 646000000 2501 1111 2382 4587;4588;4589;4590 3792;3793 3792 2 9606 Homo sapiens 0.051154264350316225 ATAAETSASEPEAESK Acetyl (Protein N-term) 1619.7162 0.71623974 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;Q15020-2;A0A494C0L2;F8W667;Q15020-3 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 1 0 0 1 0 1 42.028 42.028 3 3.283E-06 10980 20230619_1880_Aki_TMTPro18x_K_F1 50.305 42.862 96635 73499 90868 98701 99875 116180 103980 105030 120610 114610 125180 125760 126380 116930 118480 105970 130720 115130 89273 67513 92977 97808 103220 115870 105130 108320 122110 115680 128280 126810 128630 120290 121220 107250 124850 109310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114580000 2502 1555 2383 4591 3794 3794 1 9606 Homo sapiens -0.06882972628227435 ATAAFILANEHNVALFK Unmodified 1828.9836 0.98356866 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6 IPO5;RANBP5 Importin-5 yes no 0 0 0 3 0 1 61.779 61.808 3 2.8182E-06 19174 20230619_1882_Aki_TMTPro18x_K_F3 105.38 76.571 98270 87661 112820 98266 84225 94799 108290 88637 103070 106100 95268 78436 92345 88498 136830 90560 79801 91821 91030 80328 112880 98391 90327 96022 107650 91512 105020 105480 97991 81243 96458 91059 134960 91205 76987 87154 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118970000 2503 782 2384 4592 3795 3795 1 9606 Homo sapiens 0.10223621831642049 ATAAPAGAPPQPQDLEFTK Unmodified 1908.9581 0.95814177 3492 P22695;H3BRG4;H3BSJ9;H3BUE4;H3BUI9 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 6 0 1 53.79 53.868 3 1.0742E-10 15546 20230619_1886_Aki_TMTPro18x_K_F6 139.12 125.44 268860 244770 291630 307460 331130 319140 294850 328470 347990 431560 448240 478440 486290 432320 321870 613320 450810 524030 248960 224530 294950 305540 339480 322200 301300 337590 355980 431880 456790 482240 487490 456760 338980 607520 430590 498410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 688720000 2504 3492 2385 4593 3796;3797 3797 2 9606 Homo sapiens 0.04002102518529682 ATAATVVLQAMGLVPK Unmodified 1568.896 0.89599921 3474 P18583-5;P18583-2;H7C1M2;A0A994J4Y9;B3KRA1 SON Protein SON yes no 0 0 0 7.5 0.5 1 1 65.899 65.92 3 0.00046358 20482 20230619_1887_Aki_TMTPro18x_K_F7 79.804 64.538 19005 23670 21096 16615 16572 17101 19557 19281 22399 21502 21853 22354 20654 21932 23249 25200 23038 25738 17647 21595 21158 17412 17638 17341 19645 19605 22634 21640 22405 22644 21272 22792 23596 25297 22064 24431 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42807000 2505 3474 2386 4594;4595 3798 3798 1 9606 Homo sapiens 0.1343070463649383 ATAAYEQLK Acetyl (Protein N-term) 1035.5237 0.52367535 1578 A0A5F9ZHN7;Q9NTJ5;F8WCQ2;Q68D59 SACM1L;DKFZp686A0231 Phosphatidylinositide phosphatase SAC1 no no 1 0 0 2 0 1 53.023 53.056 2 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 106120000 2506 1578 2387 4596 0 9606 Homo sapiens 0.007334463437018712 ATADDELSFK Unmodified 1095.5084 0.50841922 1416 A0A384ME16;Q6ICN0;B0LPF3;P62993;B3KR50;P62993-2;J3KT38;J3QRL5 GRB2 Growth factor receptor-bound protein 2 yes no 0 0 0 3 0.816 1 1 1 50.523 50.575 2 2.2118E-07 14700 20230619_1881_Aki_TMTPro18x_K_F2 191.1 150.12 213940 171500 185980 219900 210020 233940 213780 210600 245720 297550 337670 357280 340950 296800 272210 359150 385630 404360 197580 157420 191810 218210 216470 234970 216400 219140 252370 297780 342300 357910 344720 311450 284760 362160 368000 383510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 213160000 2507 1416 2388 4597;4598;4599 3799;3800 3799 2 9606 Homo sapiens -0.035514652441406724 ATAEQISSQTGNK Unmodified 1333.6474 0.64737232 569 A0A024R9D7;Q16698-2;Q16698;E5RJG7;Q7LDK6;E5RFV2;E5RJD2 DECR1;DECR 2,4-dienoyl-CoA reductase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 39.479 39.568 3 2.475E-11 9350 20230619_1886_Aki_TMTPro18x_K_F6 187.51 165.47 42145 25059 51099 57930 75609 91936 65142 78153 72326 47323 74653 85097 65740 63405 77050 40111 80825 76086 38973 23225 51590 56159 76361 89959 66537 79924 73252 50655 76194 83880 67962 64877 78146 42829 77264 71903 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253990000 2508 569 2389 4600;4601 3801 3801 1 9606 Homo sapiens -0.0061054734662775445 ATAEVLNIGK Acetyl (Protein N-term) 1056.5815 0.58152458 3489 P22234;P22234-2;E9PBS1;B4DGX3 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 1 0 0 5 1.41 1 1 1 1 1 59.532 59.57 2 4.9271E-14 18125 20230619_1883_Aki_TMTPro18x_K_F4 109.86 80.289 782940 644080 673470 757800 632000 781720 690800 690780 797270 919180 880980 893100 958060 819190 885890 1012900 936870 1014100 723150 590640 693150 756250 662420 786560 696710 718210 810320 915830 903440 905310 971930 857770 905650 1014500 896430 962930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1219300000 2509 3489 2390 4602;4603;4604;4605;4606 3802;3803;3804 3803 3 9606 Homo sapiens 0.055497082691545074 ATAEVLNIGKK Acetyl (Protein N-term) 1184.6765 0.6764876 3489 P22234;P22234-2;E9PBS1;B4DGX3 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 1 0 1 7.5 0.5 1 1 53.723 53.792 3 1.4311E-05 15247 20230619_1887_Aki_TMTPro18x_K_F7 67.776 39.608 197360 187170 192150 177400 191020 205040 196880 193220 210420 147530 148420 136540 153970 115810 174680 145920 150860 123480 182630 171240 195500 180510 198620 205110 198610 197000 210970 151310 155450 138490 157840 121780 175770 145010 144390 117620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 792360000 2510 3489 2391 4607;4608 3805 3805 1 9606 Homo sapiens 0.09153641740317653 ATAFNEQVDK Unmodified 1121.5353 0.53530267 3514 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 4 0 1 44.904 44.948 2 1.3493E-06 11704 20230619_1883_Aki_TMTPro18x_K_F4 201.61 161.18 122160 93208 107690 112750 131920 160150 136400 133590 171180 137410 160510 165220 163070 145930 130980 169160 187190 167890 112800 85523 111020 112860 135440 157690 138310 138390 171870 139610 165290 165850 164940 152330 137060 169440 178430 159550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78209000 2511 3514 2392 4609 3806 3806 1 9606 Homo sapiens -0.02060356632955518 ATAGAYIASQTVK Unmodified 1279.6772 0.67721588 3517 P28074;P28074-2;H0YJM8 PSMB5 Proteasome subunit beta type-5 yes no 0 0 0 1.5 0.5 1 1 48.506 48.538 3 0.00018043 13772 20230619_1881_Aki_TMTPro18x_K_F2 96.23 55.857 357010 334430 393660 407250 380220 406900 436500 402240 598550 471430 473400 377410 477900 294500 460510 332570 389630 352330 330700 306640 396730 405350 397560 411480 441710 413200 595210 470150 491120 384590 485910 309210 463940 335150 373220 334570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 331550000 2512 3517 2393 4610;4611 3807 3807 1 9606 Homo sapiens 0.048564363893547124 ATAGDTHLGGEDFDNR Unmodified 1674.7234 0.72339081 1031;1463 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNV4;Q9UQC1;Q53FC7;B3KSM6;B2R6X5;A0A384NKX5;P17066;B4DHP5;P48741 HSPA1A;HSPA1B;HEL-S-103;HSP70-1;HSPA6;HSPA7 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 0 0 0 2 0.816 1 1 1 38.573 38.612 3 2.7575000000000003E-77 9432 20230619_1880_Aki_TMTPro18x_K_F1 341.73 315.61 352390 283260 314830 426860 463030 521490 494620 506320 589670 479170 504320 490110 539700 441340 428520 603160 589580 527520 325520 260480 325960 420160 470330 519540 499540 517460 591670 486270 522780 495800 544520 465380 447540 598760 562120 502070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2732900000 2513 1031;1463 2394 4612;4613;4614 3808;3809;3810 3808 3 9606 Homo sapiens -0.08698195237138862 ATALPLLK Unmodified 825.53239 0.53238955 4708 Q9Y2P8 RCL1 RNA 3'-terminal phosphate cyclase-like protein yes yes 0 0 0 3 0 1 56.348 56.384 2 0.0074893 16890 20230619_1882_Aki_TMTPro18x_K_F3 120.92 27.997 91625 79079 77261 91738 92466 123190 101840 94592 110420 86079 88272 82231 97974 82391 83838 96687 99174 93230 84642 72496 80032 91985 95297 121470 102360 98396 111060 87421 91994 83719 99032 85748 86414 96707 94699 88609 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44482000 2514 4708 2395 4615 3811 3811 1 9606 Homo sapiens 0.11264464770840732 ATAPQTQHVSPMR Oxidation (M) 1438.6987 0.69869638 2288;2925 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;P29692;P29692-3;E9PK01;P29692-4;E9PQZ1;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;E9PK06 EEF1D Elongation factor 1-delta no no 0 1 0 5.67 2.05 1 1 1 28.418 28.474 3 0.0013135 5223 20230619_1886_Aki_TMTPro18x_K_F6 76.01 69.873 5777.5 5790.3 8057.6 7872 11455 12644 8253.5 9454.3 12707 9861.6 10255 11193 12208 9096.8 9661.5 9110.9 11716 12773 5367.2 5296.5 8044.6 7837.2 11547 12347 8647 9882.7 12594 9993.8 10725 11224 12270 9465.4 9979.1 9362 11198 12089 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 10919000 2515 2288;2925 2396 4616;4617;4618 3812;3813;3814 3813 1414 3 9606 Homo sapiens -0.00310501853596179 ATAPQTQHVSPMR Unmodified 1422.7038 0.70378176 2288;2925 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;P29692;P29692-3;E9PK01;P29692-4;E9PQZ1;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;E9PK06 EEF1D Elongation factor 1-delta no no 0 0 0 7.5 0.5 1 1 31.763 31.812 3 0.028539 6069 20230619_1887_Aki_TMTPro18x_K_F7 44.436 30.773 6823.8 4545 9234 8512.3 7627.9 7435.3 5881.9 7776.3 9134.6 5483.7 10102 9386.6 9333.8 8615.7 9256.5 6061.6 9061.2 10334 6320.9 4195.2 9146.5 8253.1 7996.4 7604.6 6146.9 7860.7 9140.9 5790.2 10279 9329.7 9548.9 8778.6 9385.4 6383 8680.4 9765.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29219000 2516 2288;2925 2396 4619;4620 3815 3815 1 9606 Homo sapiens 0.009338020090353893 ATAPVSFNYYGVVTGPSASK Unmodified 2015 6.5850998E-06 4077 Q5VW32-2;Q5VW32;Q5VW33;F5GXQ0;B7Z953 BROX BRO1 domain-containing protein BROX yes no 0 0 0 3 0 1 59.956 59.985 3 1.3716E-23 18427 20230619_1882_Aki_TMTPro18x_K_F3 193.22 171.98 28979 25723 26022 32300 31550 38011 34632 38238 37739 37697 43212 37327 41628 35292 37121 39515 41297 48750 26788 23597 26809 32146 32448 37995 34844 39016 38484 38112 43965 37869 42319 36716 38072 40148 39524 46178 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37518000 2517 4077 2397 4621 3816 3816 1 9606 Homo sapiens 0.03310658207055894 ATAPYNYSYIFK Acetyl (Protein N-term) 1478.7082 0.70818166 492 A0A024R845;P61106;X6RFL8;A0A994J4B9;A0A994J774 RAB14 Ras-related protein Rab-14 yes no 1 0 0 1.5 0.5 1 1 64.136 64.14 2 1.668E-09 20171 20230619_1880_Aki_TMTPro18x_K_F1 133.57 106.48 161180 123050 147950 180110 132760 156700 163760 182450 165800 185780 155850 150820 156100 137980 176670 187310 183440 178110 148870 113140 151370 176840 140010 160740 163470 184670 168550 186420 160440 154300 160350 145370 179720 186890 175420 169290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 360280000 2518 492 2398 4622;4623 3817;3818 3817 2 9606 Homo sapiens -0.012024102964005579 ATASSSAQEMEQQLAER Unmodified 1835.832 0.83195498 282 A0A024R471;Q9H9Q2;J3KQ34;A0A087X1P5;Q9H9Q2-2;B3KW51;J3QT73;B3KV02;A0A024R478 COPS7B COP9 signalosome complex subunit 7b yes no 0 0 0 2 0 1 48.572 48.637 3 2.3863000000000003E-71 13807 20230619_1881_Aki_TMTPro18x_K_F2 241.14 223 90955 70816 83881 92082 84611 112000 99548 87046 85461 111030 109860 105620 125850 96753 104260 99473 102810 117290 84024 65019 85888 91467 88339 111110 99080 91326 88965 110740 112240 107130 126800 100330 106290 100940 98478 111160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132010000 2519 282 2399 4624 3819 3819 1 9606 Homo sapiens -0.0525277204901613 ATATHTDVLK Unmodified 1055.5611 0.56112349 2472 B4DF80;Q9H6R4-4;Q9H6R4;A0A0A0MRW6;Q9H6R4-2;B3KPN5 NOL6 Nucleolar protein 6 yes no 0 0 0 5.5 0.5 1 1 36.827 36.907 3 3.7002E-07 8293 20230619_1886_Aki_TMTPro18x_K_F6 175.15 131.45 44554 26943 45895 45819 63838 55854 57970 53860 73789 44113 49348 53201 58759 43595 52180 42370 62964 46242 41141 24846 46765 44830 64633 55679 59241 54912 73226 45440 52220 53251 59336 45250 53704 42857 60023 43941 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209170000 2520 2472 2400 4625;4626 3820 3820 1 9606 Homo sapiens 0.035565376093245504 ATAVLVIASTDVDK Unmodified 1401.7715 0.7715102 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;Q9BY44-2;H7C5R5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 7 0 1 61.139 61.178 3 0.0013622 18295 20230619_1887_Aki_TMTPro18x_K_F7 74.769 53.211 76449 63538 71799 88617 65004 88134 93072 74979 99383 99706 94124 100300 115530 88648 94678 113960 136430 124970 70662 58367 73359 87370 68939 88802 92356 78250 100710 99484 97794 101390 116230 93238 99041 114660 130060 118620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221580000 2521 4468 2401 4627 3821 3821 1 9606 Homo sapiens 0.08669530420820593 ATAVMPDGQFK Oxidation (M) 1179.5594 0.55940893 1476 A0A384NPQ2;Q06830;A0A0A0MSI0;B2R4P2 PRDX1 Peroxiredoxin-1 yes no 0 1 0 6.25 0.829 1 1 2 45.439 45.524 3 5.2352E-05 11736 20230619_1886_Aki_TMTPro18x_K_F6 125.68 100.3 1000500 809950 818670 991460 1160100 1088100 1059900 966650 1198200 1075600 1236000 1046200 1112300 945540 1202500 1253600 1137100 1139900 923650 743080 852700 987360 1174300 1090800 1078400 999200 1214000 1080800 1259900 1061200 1143300 994840 1217900 1248400 1088600 1083900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2861200000 2522 1476 2402 4628;4629;4630;4631 3822;3823;3824;3825 3823 981 4 9606 Homo sapiens -0.023188394709450222 ATAVMPDGQFK Unmodified 1163.5645 0.56449431 1476 A0A384NPQ2;Q06830;A0A0A0MSI0;B2R4P2 PRDX1 Peroxiredoxin-1 yes no 0 0 0 7 0.816 2 2 2 50.201 50.279 2;3 1.4408E-08 13655 20230619_1887_Aki_TMTPro18x_K_F7 213.03 174.76 513180 398230 438560 481800 505100 594780 509570 507800 578280 635980 653410 656470 733470 588070 630450 752510 716170 698250 473800 365370 453000 481110 520070 590830 515750 528140 588680 636480 670340 663330 740930 617640 648290 750190 684270 663840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7493999999.999999 2523 1476 2402 4632;4633;4634;4635;4636;4637 3826;3827;3828 3827 3 9606 Homo sapiens -0.010745356083134538 ATAVVDGAFK Unmodified 977.5182 0.51819605 3538 V9HW12;P32119;B4DF70;A6NIW5;A0A024R7F2;P32119-2 HEL-S-2a;PRDX2 Peroxiredoxin-2 yes no 0 0 0 6.14 2.23 1 2 2 2 50.836 50.902 2;3 8.5101E-07 14293 20230619_1886_Aki_TMTPro18x_K_F6 215.14 164.08 1287600 1029000 1153800 1228100 1297200 1373600 1207500 1209300 1395400 1319200 1555500 1589700 1471000 1359800 1467600 1621900 1720000 1677900 1189400 943860 1185600 1225800 1333800 1374500 1228900 1250000 1417000 1335800 1585100 1594200 1504800 1423500 1507200 1628400 1642900 1593300 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 10704000000 2524 3538 2403 4638;4639;4640;4641;4642;4643;4644 3829;3830;3831;3832;3833 3830 5 9606 Homo sapiens 0.028537675519032746 ATCAPQHGAPGPGPADASK Unmodified 1788.8213 0.82133071 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 FLNA;FLJ00119 Filamin-A yes no 0 0 0 5.5 0.5 1 1 35.106 35.177 3 1.2571E-08 7654 20230619_1886_Aki_TMTPro18x_K_F6 120.71 116.26 26823 18345 17939 25342 37742 36491 28855 31739 41618 31599 34826 32721 38890 31780 30241 37622 36824 34086 24709 16864 19299 25141 37405 35948 29985 32728 41390 32007 36200 33158 39150 33122 31306 37496 35151 32422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 512750000 2525 3484 2404 4645;4646 3834 3834 1 9606 Homo sapiens -0.041527099127961264 ATCAVEVFGLLEDEENSR Acetyl (Protein N-term) 2079.9419 0.94189936 356 P46934-4;A0A024R5S9;A0A3B3IUC1 NEDD4 yes no 1 0 0 1 0 1 67.351 67.351 2 7.6296E-07 21430 20230619_1880_Aki_TMTPro18x_K_F1 77.912 72.428 1358.1 0 0 0 0 992.08 0 0 0 0 0 0 0 0 0 0 0 0 1237.5 0 0 0 0 902.14 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1094600 2526 356 2405 4647 3835 3835 1 9606 Homo sapiens -0.054873915004463925 ATCIGNNSAAAVSMLK Oxidation (M) 1622.7756 0.77562607 3505 P25789;H0YMZ1;H0YN18;H0YL69;B2RDG0;H0YMA1;P25789-2;H0YKT8;H0YMI6;H0YKS0 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type;Proteasome subunit beta type yes no 0 1 0 2 0 1 49.982 50.04 3 9.1272E-06 14467 20230619_1881_Aki_TMTPro18x_K_F2 99.569 91.392 44693 39986 44097 49084 49846 58575 58970 47295 83767 48272 47399 47048 53569 44220 50763 55063 58694 51641 41346 36672 44977 48933 51634 58245 59620 49160 82371 48798 50610 47739 54364 46285 52125 54958 56032 49111 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43896000 2527 3505 2406 4648 3836 3836 2172 1 9606 Homo sapiens -0.010850714194248212 ATDAEADVASLNR Unmodified 1331.6317 0.63172225 2862;3405 P09493-3;D9YZV5;P09493-4;Q15657;P09493-10;A0A0K0K1I0;P09493-9;H0YKX5;P09493;D9YZV4;Q6ZN40;A0A0S2Z4G6;C9IZA2;H0YKP3;B4DTK3;Q5TCU3;P07951;V9HW25;CON__Q3SX28;A7XZE4;P07951-2;B4DGC2;B4E3P1 TPM1;TPM2;HEL-S-273;TPM2b Tropomyosin alpha-1 chain;Tropomyosin beta chain no no 0 0 0 1.5 0.5 1 1 44.77 44.812 2 1.2940000000000002E-35 12058 20230619_1881_Aki_TMTPro18x_K_F2 272.15 246.42 + 23547 19333 21138 33036 76874 106700 75157 70629 111770 49207 51721 52325 57910 50241 54469 63629 52204 58733 21755 17805 22652 33112 75630 101360 76838 73996 109200 51152 56163 52960 58778 52588 55378 63427 50015 55813 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79742000 2528 2862;3405 2407 4649;4650 3837 3837 1 9606 Homo sapiens -0.02082833863664746 ATDCVGHDVVTLLR Unmodified 1554.7824 0.78242601 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 5.5 0.5 1 1 51.545 51.621 3 5.5074E-17 14579 20230619_1886_Aki_TMTPro18x_K_F6 214.14 202.35 415870 350570 417950 415930 458740 574350 605400 637260 771120 554430 503150 537270 694560 557140 566660 591680 625480 580130 384630 321480 425250 416950 477910 569930 606680 644030 765040 564680 537420 546880 696650 576070 581790 593400 597570 551300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 741740000 2529 43 2408 4651;4652 3838 3838 1 9606 Homo sapiens 0.027226095234709646 ATDDLINVTGR Unmodified 1173.599 0.59896556 1830 A0A8V8TMX5;Q9UK59;A0A8V8TNX0;A0A8V8TMF7;A0A8V8TP85;B3KSR5;Q9UK59-2 DBR1 Lariat debranching enzyme yes no 0 0 0 3.5 0.5 1 1 48.556 48.615 2 5.8377E-09 13339 20230619_1883_Aki_TMTPro18x_K_F4 187.99 135.36 191470 152250 168170 174320 197750 233240 195510 184710 239660 241160 233600 240190 254420 210660 221310 269760 249400 252330 176840 139600 173270 175000 203250 230270 198600 193540 241540 240730 240890 242870 257420 221410 227440 269020 238380 239840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 258310000 2530 1830 2409 4653;4654 3839 3839 1 9606 Homo sapiens 0.01911003804139 ATDFVADR Unmodified 893.4243 0.42429566 3600 Q53GL5;P48735;P48735-2;Q13584;B4DSZ6;H0YL11 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] yes no 0 0 0 2.5 0.5 1 1 41.056 41.124 2 0.00014202 10311 20230619_1881_Aki_TMTPro18x_K_F2 174.52 100.9 588920 466400 533150 555350 758970 782340 706310 715010 894590 731830 842060 875470 883890 749890 768680 837400 1006900 877800 544020 427820 549740 556550 769040 772470 720830 735320 898180 743460 868360 878000 895560 782260 797110 842250 960200 833790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 837950000 2531 3600 2410 4655;4656 3840;3841 3840 2 9606 Homo sapiens -0.02667951550381531 ATDILPK Unmodified 756.43815 0.43815481 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3;Q5CAQ4;I3L0K7;I3L239 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 6.5 0.5 1 1 48.312 48.395 3 0.043273 13173 20230619_1886_Aki_TMTPro18x_K_F6 63.287 14.783 44486 38977 38384 39775 49454 50322 44441 42667 59696 52289 57252 60259 60836 47963 50853 66240 64709 62013 41106 35690 39666 40259 50367 49944 45562 44377 59845 52595 59018 60406 61492 50851 52736 65987 61761 58955 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143060000 2532 1211 2411 4657;4658 3842 3842 1 9606 Homo sapiens 0.05019325948705955 ATDLGGTSQAGTSQR Unmodified 1448.6855 0.68554874 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;A0A7P0T8C6;Q7Z2W4-3;Q05DV5 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 0 4 0 1 34.157 34.21 2 1.3271E-24 7212 20230619_1883_Aki_TMTPro18x_K_F4 221.8 204.36 30084 13247 40934 33544 58994 75068 44865 57211 50916 37528 57045 64645 56157 51673 57595 23501 71118 62294 27820 12321 40918 32709 59527 72258 46286 59085 51721 39829 58263 63886 57442 52265 59085 26361 67853 58789 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32246000 2533 2740 2412 4659 3843;3844 3843 2 9606 Homo sapiens -0.020846614319680157 ATDQVVALACAFNK Unmodified 1506.7501 0.75006325 2411 E9PEF1;B4DIM1;Q8IW54;B3KT60;O00408-2;O00408-4;O00408-3;O00408;H0YG13;H0YFL1;O00408-6 PDE2A cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 2 0 1 62.02 62.03 3 0.0008103 19512 20230619_1881_Aki_TMTPro18x_K_F2 84.173 68.786 74447 56489 73204 64658 55047 58624 63935 70249 74334 74909 88937 92753 98188 83103 100930 97994 93044 103570 68799 51805 74127 64609 58851 60030 64347 71087 75714 75980 91019 93053 100020 86826 102130 98562 89173 98278 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91640000 2534 2411 2413 4660 3845 3845 1 9606 Homo sapiens 0.01695822120473167 ATDSSDPLKPYQDFIIDSR Unmodified 2167.0433 0.043327963 201 A0A024R2H7;A0A8V8TM71;Q96Q11-2;Q96Q11 TRNT1 CCA tRNA nucleotidyltransferase 1, mitochondrial yes no 0 0 1 5 0.816 1 1 1 60.547 60.584 3 0.0048477 18152 20230619_1885_Aki_TMTPro18x_K_F5 67.83 52.437 33925 29425 38861 33516 42815 56946 41812 33081 36473 39805 44051 42725 45700 34926 39475 46143 44603 47692 31419 26970 39106 33813 44176 55239 42052 35640 37785 39972 44905 42990 46265 36898 40572 46254 42648 45271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74554000 2535 201 2414 4661;4662;4663 3846 3846 1 9606 Homo sapiens 0.006488031937351479 ATDSWALAVDEQEAAVK Acetyl (Protein N-term) 1844.8792 0.87922275 3102 Q9NUU7;I3L0H8;B4DS24;H3BTB3;H3BP50;H3BSL8;J3QRH0;H3BP36 DDX19A ATP-dependent RNA helicase DDX19A yes no 1 0 0 1.5 0.5 1 1 63.715 63.719 3 9.9455E-14 20290 20230619_1881_Aki_TMTPro18x_K_F2 58.671 46.505 28005 23029 26215 24061 25043 24603 23028 22767 28438 32191 30086 30195 28774 23161 31398 31350 27958 35268 25882 21095 26738 24241 26041 24820 23519 23639 28759 31959 30741 30495 29518 24573 31695 31589 26834 33429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72347000 2536 3102 2415 4664;4665 3847 3847 1 9606 Homo sapiens -0.009421695063792868 ATDTINSQGQFPSYLETVTK Unmodified 2199.0695 0.069542713 4200 Q86Y56;Q86Y56-2;E9PGY2;B3KNN3;B3KPE2;A0A024R803;B3KU91;H0Y650;Q86Y56-3 DNAAF5;FLJ20397 Dynein assembly factor 5, axonemal yes no 0 0 0 8 0 1 60.685 60.717 3 5.1785E-05 18076 20230619_1888_Aki_TMTPro18x_K_F8 85.937 75.302 9768.9 9545.7 13462 10564 10995 11498 8720 11559 11635 12197 13337 10372 15276 13922 10496 10993 13231 14143 9072.2 8743.5 13308 10608 11547 11563 9036.6 11812 11764 12240 13661 10741 15307 14094 10910 11271 12639 13397 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6071500 2537 4200 2416 4666 3848 3848 1 9606 Homo sapiens 0.017970723652069864 ATDTSQGELVHPK Acetyl (Protein N-term) 1423.6943 0.69432251 4054 Q5SSJ5;B0QZK9;B0QZK8;Q5SSJ5-5 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 1 0 0 2 0 1 40.712 40.786 2 1.0077E-11 10143 20230619_1881_Aki_TMTPro18x_K_F2 84.17 57.572 64510 51489 53360 69848 73130 69124 79175 70852 91267 63801 84061 83190 85293 71015 74321 85583 95739 94244 59556 47292 55527 68988 74500 70011 79798 72126 91886 65498 86626 83216 86506 74432 77009 86218 91385 89427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290000000 2538 4054 2417 4667 3849 3849 1 9606 Homo sapiens -0.000576877954927113 ATDVMIAGK Oxidation (M) 920.46372 0.46371763 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 1 0 6 0 1 43.993 44.084 2 0.00164 11276 20230619_1886_Aki_TMTPro18x_K_F6 109.11 75.021 150210 135410 171310 146270 209480 181430 195770 178090 200680 205030 258760 201420 213180 166880 257920 185630 199390 198980 139140 124040 172640 147420 213700 180910 198370 182890 206430 205640 260470 203630 220920 174370 257850 187240 191340 188850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109300000 2539 1439 2418 4668 3850 3850 932 1 9606 Homo sapiens 0.0003043240883471299 ATDVMIAGK Unmodified 904.4688 0.46880301 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 0 6.5 0.5 1 1 47.987 48.075 2 2.2288E-10 13054 20230619_1886_Aki_TMTPro18x_K_F6 160.11 93.424 266400 254880 266920 262450 298570 302590 286510 263200 292610 369360 392560 335220 395280 266890 352360 329730 343870 291440 246600 233330 271500 265090 307040 302270 289880 274470 302100 366410 397770 339580 400700 281180 358440 328320 328730 277410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233460000 2540 1439 2418 4669;4670 3851;3852 3851 2 9606 Homo sapiens 0.01274736271443544 ATDYGPEEVCER Unmodified 1424.5878 0.58780853 3294 O75157-2;O75157 TSC22D2 TSC22 domain family protein 2 yes no 0 0 0 1 0 1 40.675 40.675 2 6.0252E-05 10404 20230619_1880_Aki_TMTPro18x_K_F1 127.51 115.8 29436 24154 29975 28751 35078 41504 37477 32148 39639 35452 43806 42529 44548 38279 39563 45558 50213 51978 27224 22153 30482 28825 36112 40781 37704 33587 40405 35888 44772 42733 45218 40016 40938 46004 47952 49294 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28842000 2541 3294 2419 4671 3853 3853 1 9606 Homo sapiens -0.10750186352311175 ATEAGSLEAR Unmodified 1003.4934 0.49343786 1584 A0A8Q3SIN5;D3DVA5;V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF0 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 0 0 0 2 0 1 34.671 34.728 2 0.02116 7597 20230619_1881_Aki_TMTPro18x_K_F2 83.499 67.837 17367 9063.3 16774 20880 30902 30222 21760 23448 20794 18570 29524 34190 26961 23311 22288 13384 33647 32198 16018 8405.5 17320 20201 30701 29681 22449 24292 21575 19501 29795 33593 27382 23895 23320 14694 32073 30388 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54212000 2542 1584 2420 4672 3854 3854 1 9606 Homo sapiens -0.008169123214884166 ATEALCWAEGQR Unmodified 1390.6299 0.62994811 4317 Q969X6;H3BSH7;Q969X6-2;Q969X6-3;H3BPD7;I3L4T9;J3KSI1 CIRH1A Cirhin yes no 0 0 0 5 0 1 53.061 53.133 3 1.7952E-05 15113 20230619_1885_Aki_TMTPro18x_K_F5 95.162 85.629 37309 29244 37708 39161 37917 45202 37839 43279 49600 43378 40012 36679 36684 31082 42652 37010 44761 34419 34493 26858 38284 38809 39412 45189 38538 44326 49477 43640 41348 37349 37837 32565 43347 36975 42735 32757 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62857000 2543 4317 2421 4673 3855 3855 1 9606 Homo sapiens -0.04974166153283477 ATEDGEEDEEMIESIENLEDLK Oxidation (M) 2553.08 0.079968562 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 1 0 1 0 1 62.659 62.659 3 1.9332E-24 19568 20230619_1880_Aki_TMTPro18x_K_F1 192.62 184.91 28244 23732 23751 31414 22709 28038 25882 26667 28505 31684 36648 29723 34496 28665 32091 38304 31501 37831 26086 21787 24533 31033 23793 28569 26008 27482 29219 31689 37075 30269 35148 30120 32681 38289 30189 35914 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30650000 2544 2702 2422 4674 3856 3856 1620 1 9606 Homo sapiens -0.13444822343853957 ATEDGEEDEEMIESIENLEDLK Unmodified 2537.0851 0.08505394 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 1 0 1 65.141 65.141 3 2.5151E-24 20581 20230619_1880_Aki_TMTPro18x_K_F1 192.62 185.97 21136 17975 20489 19455 18125 19843 16004 16281 18225 28717 26620 22117 23689 23541 21393 27652 26403 24351 19543 16469 20819 19540 18962 19967 16353 17210 18824 28145 26754 22807 24185 24440 22105 27521 25199 23171 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48543000 2545 2702 2422 4675 3857 3857 1 9606 Homo sapiens -0.12200518481267864 ATEEPEDVR Unmodified 1044.4724 0.47236807 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DM27 PRRC2C Protein PRRC2C yes no 0 0 0 1 0 1 32.989 32.989 2 0.013887 7178 20230619_1880_Aki_TMTPro18x_K_F1 78.113 47.395 17590 10445 17520 17027 21849 29042 17533 23124 29430 17732 23983 31837 34840 30915 20614 31455 38041 41799 16236 9627.3 17869 16799 22301 28291 18308 23868 29060 18671 25370 31649 34568 31949 22232 32145 36255 39577 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9207600 2546 2894 2423 4676 3858 3858 1 9606 Homo sapiens -0.048089224209888926 ATEHPEPPK Acetyl (Protein N-term) 1046.5033 0.50327426 3850 Q13435;E9PPJ0;E9PJ04;E9PJT3 SF3B2 Splicing factor 3B subunit 2 yes no 1 0 0 1 0 1 34.011 34.011 2 0.0010908 7580 20230619_1880_Aki_TMTPro18x_K_F1 57.177 46.304 18314 11214 16970 19635 21632 27991 19957 22917 36361 21893 26323 34040 33910 38332 20521 31088 48214 53918 16898 10345 17441 19224 22126 27526 20719 23728 35669 22601 27840 34135 33835 39004 22688 32598 45903 50949 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33560000 2547 3850 2424 4677 3859 3859 1 9606 Homo sapiens -0.018117243160759244 ATENDIANFFSPLNPIR Unmodified 1917.9585 0.95847612 44 Q53F48;A0A024QZK8;P31942-2;P31942;P31942-3;B4DHY1;A0A024QZP1;P31942-4;P31942-6;P31942-5 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes no 0 0 0 1 0 1 64.289 64.289 3 2.6001E-13 20252 20230619_1880_Aki_TMTPro18x_K_F1 146.1 139.66 104950 82671 100130 99104 78094 96692 124880 90083 95332 119100 108490 102070 129520 101390 125480 131340 92753 120420 96989 75838 101820 98728 84101 97804 122240 93374 99430 118270 111630 104410 131210 106250 125910 130880 89253 114390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 575380000 2548 44 2425 4678 3860;3861 3861 2 9606 Homo sapiens 0.03621522238427133 ATENDIYNFFSPLNPMR Oxidation (M) 2043.936 0.93602612 1404 A0A384MDT2;P55795;B4DFK9;B4DP00 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes no 0 1 0 1 0 1 63.656 63.656 3 2.7654E-09 19976 20230619_1880_Aki_TMTPro18x_K_F1 126.69 113.27 13520 11419 12676 16137 17814 20734 18672 19656 18980 17442 19080 16707 19218 16684 14446 15740 18074 20616 12498 10491 13050 15959 18126 20582 18784 20088 19320 17726 19557 17000 19386 17170 14981 16103 17276 19521 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81055000 2549 1404 2426 4679 3862 3862 873 1 9606 Homo sapiens -0.044184452215404235 ATENDIYNFFSPLNPMR Unmodified 2027.9411 0.9411115 1404 A0A384MDT2;P55795;B4DFK9;B4DP00 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes no 0 0 0 2 0 1 64.659 64.667 3 5.9351E-60 20669 20230619_1881_Aki_TMTPro18x_K_F2 311 284.79 14386 12070 10936 13244 12703 18023 17617 16990 18672 16286 15695 17768 17999 15561 18052 16113 15393 19647 13278 11061 11446 13342 13224 17829 17499 17406 18839 16547 16365 17886 18298 16159 18199 16388 14783 18608 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100760000 2550 1404 2426 4680 3863 3863 1 9606 Homo sapiens -0.031741413589315925 ATENDIYNFFSPLNPVR Unmodified 1995.969 0.96904081 1427;470 P31943;G8JLB6;A0A384MEJ3;E9PCY7;H0YB39;Q68DG4;H0YBD7;H0YBG7;B4DP51;A0A024R7T3;P52597;B4DKS8 HNRNPH1;DKFZp686A15170;HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed no no 0 0 0 3.67 3.09 1 1 1 64.264 64.273 3 3.7149E-48 20489 20230619_1881_Aki_TMTPro18x_K_F2 273.84 260.22 220400 166200 200620 210370 187580 221250 227030 216360 214560 254640 250990 245600 277070 220270 219080 274360 247960 286560 203550 152580 205330 208970 197010 222750 226300 222430 220950 254930 256880 248910 279070 231030 225710 275340 237230 271910 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1889699999.9999998 2551 1427;470 2427 4681;4682;4683 3864;3865;3866 3865 3 9606 Homo sapiens 0.010895048928205142 ATENPEQVASEGLPEPVLR Unmodified 2035.0222 0.02219859 438 K7EKI4;K7ELF1;K7ELQ0;K7ES61;A0A024R7C5;X6RAY8;Q9BYD3-2;Q9BYD3 MRPL4 39S ribosomal protein L4, mitochondrial yes no 0 0 0 2 0.816 1 1 1 55.724 55.745 3 2.0972999999999997E-19 16908 20230619_1881_Aki_TMTPro18x_K_F2 172.12 154.58 34105 28955 33463 41954 32911 43017 44218 31636 43634 46709 40186 42295 49307 36307 41191 46752 44722 48848 31538 26608 34106 41276 34571 43133 43875 33559 44384 46276 41809 42912 49612 38239 42254 46912 42784 46359 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 261820000 2552 438 2428 4684;4685;4686 3867;3868 3867 2 9606 Homo sapiens 0.046088378848480716 ATENTVNPCPDDTLISFLPLAHMFER Unmodified 2987.4157 0.41572817 2140 B7Z3Z9;E7EPM6;P33121;P33121-2;A8K9T3;B4E0R0;A0A994J7S4;D6RER0 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes no 0 0 0 7 0 1 65.633 65.658 3 4.0572E-08 20364 20230619_1887_Aki_TMTPro18x_K_F7 90.974 79.342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2553 2140 2429 4687 3869 3869 1 9606 Homo sapiens 0.0015169342423178023 ATEPHMLETYTPEVTK Oxidation (M) 1861.8768 0.87677991 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8 XPO7 Exportin-7 yes no 0 1 0 4.5 0.5 1 1 45.743 45.804 3 7.5894E-05 12091 20230619_1883_Aki_TMTPro18x_K_F4 93.754 79.497 62100 53637 63819 65636 73571 73162 71261 68005 79938 81264 89188 93650 97245 71172 77918 93459 102590 104880 57455 49197 64833 65404 75520 73322 72264 70201 81343 81782 91435 93742 98014 75401 81018 94144 97939 99490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 80547000 2554 2083 2430 4688;4689 3870;3871 3870 1305 2 9606 Homo sapiens -0.01968341235715343 ATEPVIAFYEK Unmodified 1266.6496 0.64960415 3375 Q6FGX9;Q53EY8;Q5T9B7;P00568 AK1 Adenylate kinase isoenzyme 1 yes no 0 0 0 5.4 1.02 1 2 1 1 58.35 58.397 2;3 2.1675E-06 17412 20230619_1886_Aki_TMTPro18x_K_F6 152.7 129.82 178590 141520 178600 184120 140690 185970 214980 228750 236310 238930 261160 268620 275370 246290 270520 277150 271900 286520 165100 129930 180970 182520 151350 188780 213180 230950 240470 241760 267500 270620 280420 256360 275290 278540 260240 271980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 712150000 2555 3375 2431 4690;4691;4692;4693;4694 3872;3873 3873 2 9606 Homo sapiens 0.026945331291244656 ATESGAQSAPLPMEGVDISPK Unmodified 2084.0096 0.0095849934 3789 Q02790;B2R9U2;F5H120 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 4.25 0.829 1 1 2 56.751 56.793 3;4 1.4842E-11 16562 20230619_1885_Aki_TMTPro18x_K_F5 129.2 109.87 198110 172750 227530 195850 188630 190890 210320 231650 225160 235990 209480 230880 253220 201510 243960 284570 237390 258740 183490 158330 227870 196030 199360 194430 211450 233870 228110 238000 217790 233660 256510 213260 248110 283060 227340 245940 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1332000000 2556 3789 2432 4695;4696;4697;4698 3874;3875;3876;3877 3876 4 9606 Homo sapiens 0.010940584303170908 ATESGAQSAPLPMEGVDISPK Oxidation (M) 2100.0045 0.0044996155 3789 Q02790;B2R9U2;F5H120 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 1 0 3.5 0.5 1 1 51.272 51.321 3 2.1199E-16 14573 20230619_1883_Aki_TMTPro18x_K_F4 150.69 135.53 54910 46642 55616 60419 49880 46170 53777 47618 56148 66649 74737 64961 68239 59706 65594 79164 71617 76071 50791 42809 56363 59697 52290 47838 54099 49106 57836 66271 75456 65901 69732 62783 67159 79024 68496 72269 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182350000 2557 3789 2432 4699;4700 3878 3878 2470 1 9606 Homo sapiens -0.0015024543231447751 ATETVELHK Acetyl (Protein N-term) 1068.5451 0.54513908 3766 P82979;F8VZQ9;F8VS12 SARNP SAP domain-containing ribonucleoprotein yes no 1 0 0 1.5 0.5 1 1 42.913 42.954 2 2.0902E-08 11391 20230619_1880_Aki_TMTPro18x_K_F1 87.616 87.616 397230 314680 320820 375470 372440 447650 410260 393280 518200 469850 475610 461740 519360 391340 417380 515460 561500 489600 366650 288650 333430 375070 384430 445890 414650 407590 520060 470670 491670 466830 523650 412790 434670 514260 535350 465560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 782490000 2558 3766 2433 4701;4702 3879;3880 3879 2 9606 Homo sapiens 0.013608313724262189 ATEVQFPVK Unmodified 1017.5495 0.54949617 2128 A8K8Z3;Q9UKI8-5;Q9UKI8;Q9UKI8-2;Q9UKI8-3;Q9UKI8-4;Q53TE4 TLK1 Serine/threonine-protein kinase tousled-like 1 yes no 0 0 0 8 0 1 57.484 57.536 3 0.034335 16793 20230619_1888_Aki_TMTPro18x_K_F8 55.461 13.585 32969 26771 29975 34070 29600 30061 33323 30813 38303 41194 35627 35785 43069 34069 36438 44650 43628 49854 30461 24571 30714 33753 30866 30731 33535 31718 38671 40910 37005 36516 43397 35790 37613 44959 41717 47274 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5424800 2559 2128 2434 4703 3881 3881 1 9606 Homo sapiens 0.04142340586008686 ATEYIQYMR Unmodified 1173.5488 0.54884425 3693 P61244;P61244-2;Q8TAX8;G3V5L1;G3V563;Q8IYC6;G3V2R5;A0A024R682;Q6V3B1;P61244-3;P61244-4;B4E0K3 MAX Protein max yes no 0 0 0 8 0 1 50.704 50.78 2 3.5717E-05 13849 20230619_1888_Aki_TMTPro18x_K_F8 131.22 121.63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2560 3693 2435 4704 3882 3882 1 9606 Homo sapiens -0.030988221253892334 ATFAFGAQTSTTADQGAAK Unmodified 1842.8748 0.87480607 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 8 0 1 51.64 51.717 3 0.0013588 14294 20230619_1888_Aki_TMTPro18x_K_F8 70.986 53.907 51438 38953 50282 55354 57394 58716 58540 57725 69340 62444 51717 58918 62758 50335 52632 71621 71378 70524 47532 35804 51308 54581 59061 59094 59280 59169 69359 62760 54421 59673 63233 53351 54836 71504 68107 66999 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80161000 2561 68 2436 4705 3883 3883 1 9606 Homo sapiens -0.012916339292814882 ATFDAISK Unmodified 851.43888 0.43888309 3457;4261 P15880;Q6IPX5;Q8N5L9;H0YEN5;E9PQD7;Q9BSW5;O60249;Q6ZNN8;Q8NI62 RPS2;OK/KNS-cl.6 40S ribosomal protein S2 no no 0 0 0 7.2 0.748 1 2 2 48.839 48.915 2;3 0.0002186 13074 20230619_1887_Aki_TMTPro18x_K_F7 138.78 63.572 884130 709160 817420 856670 976290 1108000 997270 967090 1227100 1064500 952830 960580 1226200 864240 828050 1289100 1282300 1084800 816920 650550 838620 856290 1002800 1098000 1011100 1000100 1226400 1068000 1002100 977130 1223300 917770 876530 1275700 1221100 1033200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2787200000 2562 3457;4261 2437 4706;4707;4708;4709;4710 3884;3885 3884 2 9606 Homo sapiens 0.007221205977543832 ATFDNVTSYLK Unmodified 1257.6241 0.62411768 3670 P57081;P57081-2;P57081-3 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes no 0 0 0 1 0 1 59.663 59.663 3 0.012798 18350 20230619_1880_Aki_TMTPro18x_K_F1 68.44 52.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2563 3670 2438 4711 3886 3886 1 9606 Homo sapiens 0.005610586066950418 ATFSEFAAK Unmodified 970.476 0.47599688 1699 A0A7P0T8N8;O14776-2;O14776;G3V220 TCERG1 Transcription elongation regulator 1 yes no 0 0 0 7.5 0.5 1 1 52.087 52.163 2;3 0.00037284 14580 20230619_1887_Aki_TMTPro18x_K_F7 98.582 60.496 285630 251270 303290 309050 312850 345120 331930 327960 356520 331920 328740 320550 346530 288020 343640 373610 370220 353320 264370 230470 306810 307870 324640 345870 334380 336340 360740 334930 339400 324970 352970 302720 351110 372850 353850 335870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 212820000 2564 1699 2439 4712;4713 3887;3888;3889 3887 3 9606 Homo sapiens -0.010422078564715775 ATFSGPAGPILSLNPQEDVEFQK Acetyl (Protein N-term) 2486.2329 0.23291965 4471 Q9BYG3;C9J6C5;B4DSM4 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 1 0 0 5.5 0.5 1 1 65.735 65.778 3 3.7160000000000003E-34 20456 20230619_1885_Aki_TMTPro18x_K_F5 136.49 121.07 86026 64044 73820 86389 72626 91412 83633 81864 82172 88810 94351 96320 94099 85359 98274 103460 93701 104670 79407 58835 76075 85437 75928 91794 83668 84505 84310 89599 96265 97088 96266 89343 99640 103740 89773 99363 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 213250000 2565 4471 2440 4714;4715 3890;3891 3890 2 9606 Homo sapiens 0.04925250416226845 ATFYGEQVDYYK Unmodified 1482.6667 0.66671078 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;B4DNP4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 5.5 0.5 1 1 55.057 55.129 3 0.0020319 16055 20230619_1886_Aki_TMTPro18x_K_F6 77.185 77.185 141040 133630 144960 150510 133720 154280 141850 151500 159620 202580 185860 204010 212790 158680 184400 215750 195380 210710 130570 122430 146790 150710 140060 155700 143210 156310 162920 201920 190750 205410 214800 168300 188800 215510 186940 200130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 575850000 2566 707 2441 4716;4717 3892 3892 1 9606 Homo sapiens -0.05531591055705576 ATGAATPK Unmodified 715.38645 0.38645359 1927 Q4VB24;A3R0T8;P10412;A3R0T7 HIST1H1E Histone H1.4 yes no 0 0 0 7 0 1 33.429 33.511 2 0.056528 6729 20230619_1887_Aki_TMTPro18x_K_F7 67.981 38.832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2567 1927 2442 4718 3893 3893 1 9606 Homo sapiens 0.017375822548046926 ATGANATPLDFPSK Acetyl (Protein N-term) 1430.7042 0.70415892 322 Q15637-6;A0A024R566;B4DJU4;Q15637;Q15637-2;Q15637-3;Q15637-4;A0A024R572;A0A024R588;A0A024R5D9;B4DSE4;Q14820;F8WEV5 SF1 Splicing factor 1 yes no 1 0 0 5 0 1 58.973 59.027 2 8.0103E-09 17474 20230619_1885_Aki_TMTPro18x_K_F5 64.103 46.284 44587 34019 40506 41895 40816 46659 46051 44302 48500 49217 48657 57365 56239 47988 47637 60863 60078 64024 41180 31220 41503 41729 42530 46765 46209 45562 49301 49720 50305 57533 56764 50490 49352 61090 57389 60763 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123940000 2568 322 2443 4719 3894 3894 1 9606 Homo sapiens 0.006035002098997211 ATGATQQDANASSLLDIYSFWLNR Unmodified 2641.2772 0.27724408 3905 Q14978-3;S4R341 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 0 0 0 2.5 0.5 1 1 66.266 66.288 3 7.438300000000001E-35 21319 20230619_1881_Aki_TMTPro18x_K_F2 211.93 192.21 5421.1 4068.5 5030.7 3844.8 4110.8 4325.1 4249.2 5270.6 6779.7 5431.5 4003.6 4997 4993.9 4786.1 7128.8 5146.2 7049.7 7435.5 5007.2 3725.2 5120.4 3915.1 4351 4362.1 4357.6 5318.4 6653.5 5469.6 4293.4 5080.3 5173 4965.7 7195.7 5299.2 6748.5 7036.6 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21445000 2569 3905 2445 4720;4721 3895;3896 3895 2 9606 Homo sapiens 0.022256545624713908 ATGEADVEFVTHEDAVAAMSK Unmodified 2176.9947 0.99466321 44 Q53F48;A0A024QZK8;P31942-2;P31942;P31942-3;B4DHY1;A0A024QZP1;P31942-4;P31942-6;P31942-5 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes no 0 0 0 4 0.816 1 1 1 55.995 56.032 4 4.1633E-16 16821 20230619_1882_Aki_TMTPro18x_K_F3 150.45 41.956 76306 61495 64245 68771 65394 72145 87157 77631 89787 82490 84745 70530 102500 74499 88514 86560 86090 94016 70459 56370 66325 68929 68428 72842 86660 79074 91108 82766 87874 72345 103280 77449 90108 87215 82449 89189 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 412920000 2570 44 2446 4722;4723;4724 3897 3897 1 9606 Homo sapiens -0.04675433437660104 ATGLGPVDR Unmodified 884.47158 0.4715802 2124 A8K9T9;A8K8N7;O15067;J3QSG0;J3QSH6 PFAS Phosphoribosylformylglycinamidine synthase yes no 0 0 0 4 0 1 38.299 38.341 2 7.6954E-06 8859 20230619_1883_Aki_TMTPro18x_K_F4 133.12 91.694 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2571 2124 2447 4725 3898 3898 1 9606 Homo sapiens 0.024723277206248895 ATGPAAPPPR Unmodified 933.50321 0.50321468 797 A0A075B7B1;O15061-2;O15061;C9JIE4;O15061-3 SYNM Synemin yes no 0 0 0 6 0 1 31.004 31.036 2 0.041604 6162 20230619_1886_Aki_TMTPro18x_K_F6 62.546 50.699 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2572 797 2448 4726 3899 3899 1 9606 Homo sapiens 0.033803204745595394 ATGPAPGPTGEREPAAGPGR Unmodified 1844.9129 0.91292291 4370 Q96JE9-2;Q96JE9 MAP6 Microtubule-associated protein 6 yes no 0 0 1 4 0 1 32.843 32.9 3 7.2428E-16 6682 20230619_1883_Aki_TMTPro18x_K_F4 149.47 120.5 14788 12343 16064 15871 16117 11990 22918 16670 20901 13121 13594 13161 16829 11688 10800 13903 14213 14972 13686 11328 16212 15695 16855 12542 22627 16636 21089 13462 14427 13315 16774 12237 11294 13986 13571 14207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10899000 2573 4370 2449 4727 3900 3900 1 9606 Homo sapiens 0.02426296776025083 ATGPPVSELITK Unmodified 1211.6762 0.67615325 3461 P16401 HIST1H1B Histone H1.5 yes yes 0 0 0 4.8 2.79 1 1 1 1 1 54.446 54.493 3 0.0016589 15415 20230619_1887_Aki_TMTPro18x_K_F7 81.239 49.018 685040 600540 730810 733470 620000 698880 696040 709190 792160 784910 783790 746860 747360 688660 866250 795950 836520 796030 634070 550790 736870 729540 654870 709650 700790 725920 801340 788050 803060 758050 769910 717800 876720 798440 800380 756230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15530000000 2574 3461 2450 4728;4729;4730;4731;4732 3901;3902 3902 2 9606 Homo sapiens 0.07878222020463 ATGPVVEQAVR Unmodified 1125.6142 0.6142217 4627 Q9NY93-2;Q9NY93;Q53HB9;G3V0G3;H7C3E9;F8WDT8 DDX56 Probable ATP-dependent RNA helicase DDX56 yes no 0 0 0 5 0 1 39.384 39.476 2 0.00012147 9312 20230619_1885_Aki_TMTPro18x_K_F5 144.47 104.71 60027 43749 52592 63723 74242 83248 68661 70664 86466 70505 72698 75945 82023 64243 59698 84829 86465 77875 55410 40230 54440 62919 75310 82379 70082 73041 86513 71470 75636 76475 82354 67753 62710 84450 82411 74071 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147850000 2575 4627 2451 4733 3903 3903 1 9606 Homo sapiens 0.0564391539198823 ATGQRPHHFLR Unmodified 1318.7007 0.70068571 401 P23381;A0A024R6K8;P23381-2;G3V3Y5;G3V3H8;G3V277;B4DTK8;G3V3P2;G3V456;G3V5U1;G3V227;G3V423;G3V2Y7 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 0 1 5.5 0.5 1 1 25.794 25.848 4 0.0043866 4409 20230619_1886_Aki_TMTPro18x_K_F6 70.977 52.841 4763.5 3253.1 5981.7 4482.3 4652.9 6361.2 5242.3 5343.2 7108.5 1773.8 1206 3475.8 2029.6 2589.5 2548.9 1984 2097.7 1961 4409.4 2990.4 5947.1 4452 4963.7 6260.8 5308.5 5433.9 6884.8 2046.2 1568.7 3414.6 2078.8 2662.2 2554.5 2005.4 2010.5 1863.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1600200 2576 401 2452 4734;4735 3904 3904 1 9606 Homo sapiens 0.05408339737209644 ATGYLELSNWPEVAPDPSVR Unmodified 2200.08 0.08004782 1129 O00203;O00203-3;A0A0S2Z5J4;A8K586;A0A8Q3WKJ9;A0A8Q3WL34;A0A8Q3SIS1;A0A8Q3SHS3;A0A8Q3WKK0;A0A8Q3SHW6;A0A8Q3SHR2;A0A8Q3SI03;A0A8Q3WKN2;A0A8Q3SIM7;A0A8Q3WKF8;A0A8Q3SHU2;A0A0S2Z4Z4;A0A8Q3WKI5;Q3MNE1;A0A8Q3SHP3;B4E0B2 AP3B1 AP-3 complex subunit beta-1;AP-3 complex subunit beta yes no 0 0 0 6 0 1 62.839 62.887 3 0.004831 19432 20230619_1886_Aki_TMTPro18x_K_F6 65.16 53.898 45832 37894 44150 44982 41084 45593 48608 43738 52935 42307 48723 51190 48806 43771 53097 44976 48041 55936 42369 34752 44950 44863 43123 46021 48705 44803 53471 43125 50228 51303 50022 45461 53595 45820 46069 52984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60625000 2577 1129 2453 4736 3905 3905 1 9606 Homo sapiens 0.028010998102217854 ATGYPLAYVAAK Unmodified 1223.655 0.65502388 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 3 0 1 56.455 56.492 2 6.4709E-05 16971 20230619_1882_Aki_TMTPro18x_K_F3 153.97 125.8 70732 54929 80133 66763 77009 89882 78288 79756 89670 84186 86903 82360 85394 71288 91007 97005 95989 82881 65455 50398 80494 66786 80296 88889 79253 82266 90598 84803 89220 83366 87469 75246 92747 96266 91702 78919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51366000 2578 2980 2454 4737 3906 3906 1 9606 Homo sapiens 0.0521425671158795 ATHDGAPELGAGGTR Unmodified 1408.6695 0.66950474 4466 Q9BXW7-2;Q9BXW7;A8MYZ9;B3KVW8 CECR5 Cat eye syndrome critical region protein 5 yes no 0 0 0 3 0.816 1 1 1 31.855 31.922 3 7.844899999999999E-19 6453 20230619_1881_Aki_TMTPro18x_K_F2 168.5 137.88 47731 27564 42960 42629 52523 51510 48690 48973 56745 54776 62149 67060 65614 52540 54827 63830 71758 63023 44018 25393 44169 41917 53667 51353 49574 50358 57575 55418 63684 67019 66335 55274 56920 63895 68434 59901 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 443640000 2579 4466 2455 4738;4739;4740 3907;3908;3909 3907 3 9606 Homo sapiens -0.01848322878208819 ATHPIPAACGIYYFEVK Unmodified 1935.9553 0.955305 67 A0A024R014;A0A024QZW3;Q96S59;R4GNA3;R4GN91;O60738;B4E1Y2;R4GMX8;Q6VN20-3;Q6VN20 RANBP9;RANBP10 Ran-binding protein 9;Ran-binding protein 10 yes no 0 0 0 1.5 0.5 1 1 57.06 57.068 3 3.2087E-09 17429 20230619_1881_Aki_TMTPro18x_K_F2 128.74 115.57 47120 33935 44115 48589 44013 47693 45795 48473 52001 45272 59560 51814 58680 48859 50279 53118 48571 62297 43515 31200 45084 47840 45779 48301 46291 49388 52884 46135 60652 52254 59495 50741 51202 53817 46584 59023 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86229000 2580 67 2456 4741;4742 3910 3910 1 9606 Homo sapiens 0.024765558600165605 ATHVAFDCMK Oxidation (M) 1194.5162 0.51616391 377 Q6NUM7;A0A024R640;Q9NUQ2 AGPAT5 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon yes no 0 1 0 6.5 0.5 1 1 39.026 39.099 3 0.001342 8888 20230619_1887_Aki_TMTPro18x_K_F7 87.568 75.354 37437 23506 36361 41725 59887 60709 47304 47644 70127 17577 23612 18117 21887 15313 22804 21367 27536 21059 34559 21686 37406 40840 60009 59621 49079 48768 68126 19508 26301 18333 22445 16224 23423 21361 26255 20029 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46721000 2581 377 2457 4743;4744 3911 3911 230 1 9606 Homo sapiens -0.07331352519895518 ATIAGGGVIPHIHK Unmodified 1369.783 0.78301836 3424 Q71UI9;P0C0S5;Q71UI9-3;Q71UI9-4 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z yes no 0 0 0 3.33 0.471 2 1 44.866 44.925 2;4 2.7192E-09 11780 20230619_1882_Aki_TMTPro18x_K_F3 156.12 129.52 230600 181840 227940 238970 224020 281650 266370 228100 242880 265300 225280 237420 278180 195250 240940 251480 282960 296480 213160 166970 231840 237120 234290 280230 265350 237830 248330 265260 234410 240740 280230 206100 248030 254260 270420 281070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23349000000 2582 3424 2458 4745;4746;4747 3912;3913 3912 2 9606 Homo sapiens 0.1129181702549431 ATIELCSTHANDASALR Unmodified 1828.8738 0.87376021 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM67 CSE1L Exportin-2 yes no 0 0 0 6.5 1.5 1 1 43.274 43.319 3 7.1591E-14 10829 20230619_1888_Aki_TMTPro18x_K_F8 163.41 153.62 51779 50124 61456 55152 79297 65035 74114 58505 68610 55696 57625 48047 51253 41492 81955 53005 68522 48310 48008 45911 61832 55447 80576 64945 74820 60185 69751 56235 59375 48939 53954 43637 81885 52914 65551 46009 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29450000 2583 1462 2459 4748;4749 3914;3915 3915 2 9606 Homo sapiens -0.007521715698203479 ATIFNLK Unmodified 805.46979 0.46978929 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;Q9BY44-2;H7C5R5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 56.531 56.552 2 0.0051349 16999 20230619_1882_Aki_TMTPro18x_K_F3 143.23 86.125 522730 431150 458660 507830 444600 530020 554330 543400 580870 612960 559940 555250 650210 514480 542590 703200 581750 616500 482890 395380 471430 506940 466260 534560 553380 556060 589810 613910 579380 565120 655390 542140 556710 698280 556480 586350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 393070000 2584 4468 2460 4750;4751 3916;3917 3916 2 9606 Homo sapiens 0.05927318702663342 ATIGADFLTK Unmodified 1035.5601 0.56006086 1257 A0A158RFU6;P51149;A0A6Q8PG52;A0A6Q8PH84;C9J8S3;A0A6Q8PGE6;B4DPH9;C9J592;C9J4V0;C9IZZ0;C9J4S4;C9J7D1;A0A6Q8PF79 RAB7A Ras-related protein Rab-7a yes no 0 0 0 5.33 3.09 1 1 1 57.501 57.537 2;3 7.7732E-08 16780 20230619_1888_Aki_TMTPro18x_K_F8 227.08 172.53 693590 588640 628550 714480 566140 674710 659290 675440 700330 825270 797270 849530 863540 737460 798900 1130800 526430 972590 640990 539900 643520 710700 596020 685300 660980 694120 715720 826440 816770 857970 875730 784920 800590 1120100 509410 923810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 616200000 2585 1257 2461 4752;4753;4754 3918;3919 3919 2 9606 Homo sapiens 0.04370323240391372 ATIISEQQAK Unmodified 1087.5873 0.58733824 1823 A0A8V8TP16;P51692;A0A8V8TM91;A0A8V8TMR0;A0A8V8TP21;A0A8V8TP00;A0A8V8TM84;Q59H39;A0A8V8TMP4;P42229;A0A384N5W4;A8K6I5;A0A7I2YQY3;Q8WWS9;K7EK35;A0A7I2V380;Q59GY7;Q8WW55;A0A7I2YQF1;K7EIF9;P42229-2 STAT5B;STAT5A Signal transducer and activator of transcription 5B;Signal transducer and activator of transcription;Signal transducer and activator of transcription 5A yes no 0 0 0 6 0 1 43.78 43.872 2 1.4386E-16 11175 20230619_1886_Aki_TMTPro18x_K_F6 197.27 133.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2586 1823 2462 4755 3920 3920 1 9606 Homo sapiens 0.04704806780796389 ATILCTSYVQFK Unmodified 1429.7275 0.72753689 1932 P35244;A4D105;B5MC59 RPA3 Replication protein A 14 kDa subunit yes no 0 0 0 4 0 1 60.672 60.675 3 3.0856E-06 18578 20230619_1883_Aki_TMTPro18x_K_F4 142.97 122.84 184640 160580 172150 169720 177590 234400 203330 208030 323820 100280 97259 77925 98696 76839 137450 97033 103170 85566 170700 147080 176040 171570 185290 231430 207040 211400 313260 106940 110440 80265 102570 80407 136960 96681 98919 81457 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88834000 2587 1932 2463 4756 3921 3921 1 9606 Homo sapiens 0.029862227228477423 ATILDLSCNK Unmodified 1133.5751 0.575059 4323 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 5.33 3.09 1 1 1 54.78 54.824 2 1.3511E-05 15598 20230619_1888_Aki_TMTPro18x_K_F8 195.04 145 227310 190590 228110 244340 247710 295880 302710 289120 349800 219740 210790 180430 230100 179350 223280 247440 228650 216970 210220 174920 232140 243000 257410 295010 303300 293960 347750 224870 223500 185200 233870 188720 227590 245790 218640 206440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 656950000 2588 4323 2464 4757;4758;4759 3922;3923 3923 2 9606 Homo sapiens 0.013614470460879602 ATIPPEIFQK Unmodified 1142.6336 0.63356015 935 A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBF7;H0YBM4 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 1 0 1 57.427 57.427 3 0.033388 17455 20230619_1880_Aki_TMTPro18x_K_F1 53.597 38.625 19991 18190 18980 19559 19679 20704 22639 20254 27105 22853 24184 25881 26622 20002 21341 25067 25245 27373 18491 16661 19379 19665 20464 20851 22785 20802 27233 23055 25063 25931 26828 21108 22030 25226 24132 25967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11749000 2589 935 2465 4760 3924 3924 1 9606 Homo sapiens 0.06794871682905068 ATISDEEIER Unmodified 1161.5513 0.55134667 834 C9J0A7;B2RE76;A0A087WW88;Q9UQN3-2;Q9UQN3 CHMP2B Charged multivesicular body protein 2b yes no 0 0 0 1 0 1 40.715 40.715 2 1.0837E-09 10419 20230619_1880_Aki_TMTPro18x_K_F1 209.6 165.79 51070 40164 41098 46173 56242 65439 61894 57493 64815 53008 66742 60670 70133 54624 52171 76335 82402 69677 47135 36830 42852 46386 57415 64519 62139 59162 65888 54074 68474 61125 70616 57700 55163 75911 78461 66296 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38430000 2590 834 2466 4761 3925 3925 1 9606 Homo sapiens -0.022966951867147145 ATISNDGATILK Unmodified 1202.6507 0.65066678 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;F8WAM2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 7.25 0.829 1 1 2 49.99 50.068 2 3.0617999999999998E-40 13598 20230619_1887_Aki_TMTPro18x_K_F7 302.33 225.65 1029300 815740 877470 944180 960900 1000800 961880 882870 1058200 1155200 1281400 1210700 1300400 1067900 1078300 1409200 1333900 1325900 950410 748050 905490 943810 991490 1005500 972950 917760 1082000 1154500 1304300 1222400 1315900 1124400 1116300 1404900 1273800 1260300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 606960000 2591 4005 2467 4762;4763;4764;4765 3926;3927;3928 3927 3 9606 Homo sapiens 0.057447474980335755 ATLDEYTTR Unmodified 1068.5088 0.50875357 431 C9JP85;A0A024R770;A0A024R774;Q16656-2;Q16656;Q16656-4 NRF1 Nuclear respiratory factor 1 yes no 0 0 0 3 0 1 41.78 41.842 2 6.1215E-06 10399 20230619_1882_Aki_TMTPro18x_K_F3 181.69 166.15 61395 51077 57539 58073 64875 72048 66381 69291 77430 67315 83013 84587 78304 70393 72027 77325 91670 89046 56746 46822 58886 58276 66870 71739 67202 70913 78427 68674 84707 84616 79812 73435 74463 78238 87501 84462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66727000 2592 431 2468 4766 3929 3929 1 9606 Homo sapiens -0.02276045524286019 ATLEEAR Unmodified 788.40283 0.40283194 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B7Z1H4;B7Z1V9 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 2 0 1 33.573 33.631 2 0.021062 7134 20230619_1881_Aki_TMTPro18x_K_F2 103.75 64.085 32355 15331 46089 43006 53571 59041 43305 52455 46742 33463 59980 64505 45212 49044 54675 24121 66536 56449 29944 14284 45765 41315 54740 58268 44423 53518 47864 35789 60318 63505 47137 49758 55906 26560 63477 53310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26515000 2593 2933 2469 4767 3930 3930 1 9606 Homo sapiens 0.00016663420899476478 ATLEEARR Unmodified 944.50394 0.50394296 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B7Z1H4;B7Z1V9 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 1 3.5 0.5 1 1 29.078 29.164 3 0.0023162 5291 20230619_1882_Aki_TMTPro18x_K_F3 106.91 71.759 24883 16923 29424 27422 33833 38453 31779 33684 38879 25347 31924 29194 29197 30265 26300 17443 33721 26284 23019 15587 29568 26963 34745 37913 32386 34506 38878 26215 32939 29491 29792 30494 27150 18270 32141 24898 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30031000 2594 2933 2470 4768;4769 3931 3931 1 9606 Homo sapiens 0.029471151236066362 ATLEMVNHEK Unmodified 1170.5703 0.57030797 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 0 4.5 0.5 1 1 41.984 42.048 3 8.0819E-06 10420 20230619_1883_Aki_TMTPro18x_K_F4 156.01 105.89 333230 263800 324250 275620 235840 258290 193740 193930 225500 312810 503250 521650 360820 410230 479320 382960 572400 517280 308000 241690 328350 277370 250930 261250 199360 206020 238900 315980 497320 516180 379100 424930 489890 393160 546390 490090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 346490000 2595 1958 2471 4770;4771 3932;3933 3932 2 9606 Homo sapiens -0.008154370966622082 ATLENITNLRPVGEDFR Unmodified 1944.0065 0.0064889465 4614 Q9NWV4 C1orf123 UPF0587 protein C1orf123 yes yes 0 0 1 7.5 0.5 1 1 56.272 56.329 3 2.1067999999999998E-23 16286 20230619_1887_Aki_TMTPro18x_K_F7 200.99 174.26 161170 124590 145140 159390 132310 144940 166670 165990 167280 170170 187110 198320 200910 171150 199340 208950 205160 228040 148860 114370 148670 157930 139360 148150 166130 168280 171170 172560 191770 199170 204530 179460 203120 210400 196400 216310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2842600000 2596 4614 2472 4772;4773 3934 3934 1 9606 Homo sapiens 0.07224596158425811 ATLLEDQQDPSPSS Unmodified 1486.6787 0.67873203 4548 Q9HC35;B5MBZ0;Q9HC35-2;B4DIT9 EML4 Echinoderm microtubule-associated protein-like 4 yes no 0 0 0 1.5 0.5 1 1 51.673 51.696 3 5.9574E-09 15036 20230619_1880_Aki_TMTPro18x_K_F1 122.46 118.84 60921 51138 50987 57453 57414 58609 52818 55638 66020 62510 68742 68625 66241 61004 69906 65924 63348 71224 56265 46871 52740 57528 59016 59142 53953 57234 66617 63003 70303 69128 67877 63423 70641 66486 60729 67564 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 194670000 2597 4548 2473 4774;4775 3935;3936 3935 2 9606 Homo sapiens -0.04514019103157807 ATLSAEVYR Unmodified 1008.524 0.52400971 4534 Q9H8H0;J3QLQ6;Q9H8H0-2 NOL11 Nucleolar protein 11 yes no 0 0 0 5.5 0.5 1 1 43.133 43.22 2 0.011756 10871 20230619_1886_Aki_TMTPro18x_K_F6 81.972 62.495 147030 114080 159880 158120 193400 222120 186760 196050 201820 133350 136080 128310 141460 121690 143850 113710 170570 136580 136010 104810 161850 156870 198080 219050 189150 200330 201970 138110 142940 130290 144390 125370 147510 115790 162700 129610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110660000 2598 4534 2474 4776;4777 3937 3937 1 9606 Homo sapiens 0.020088660635678934 ATLSSIR Unmodified 746.42865 0.42865276 3051 H0YKD8;P46779;P46779-2;P46779-3;O60251 RPL28 60S ribosomal protein L28 yes no 0 0 0 5.33 3.09 1 1 1 38.532 38.548 2 0.0079071 8902 20230619_1888_Aki_TMTPro18x_K_F8 121.52 35.627 1541900 1381800 1352500 1290000 2344600 3197200 2007200 2009900 3774400 501360 472800 558790 682530 479720 683710 663960 684820 611850 1425100 1264200 1405200 1335100 2356800 3059400 2093900 2093400 3603100 597430 649880 563410 691150 507540 695100 661420 654710 581960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 633360000 2599 3051 2475 4778;4779;4780 3938;3939;3940 3940 3 9606 Homo sapiens 0.04529557663192918 ATLVDHGIR Unmodified 980.54033 0.54032847 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49;Q59FY4 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 6 0.816 1 1 1 36.218 36.292 3 5.4809E-05 7985 20230619_1885_Aki_TMTPro18x_K_F5 144.5 66.349 97173 77545 104730 101020 123190 98893 109080 92596 98103 98633 119600 93270 94201 77827 125440 84423 97891 80591 89897 71192 105960 100070 125750 100120 110490 95268 101420 99187 120480 94471 98365 81150 125250 84668 93808 76649 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168090000 2600 3833 2476 4781;4782;4783 3941;3942 3941 2 9606 Homo sapiens 0.04927992020327565 ATLVESSTSGFTPGGGGSSVSMIASR Oxidation (M) 2458.1646 0.16458209 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;P49321-2;Q5T626;Q5T624;Q9P1N1;H0YDS9 NASP Nuclear autoantigenic sperm protein yes no 0 1 0 1 0 1 53.989 53.989 3 9.9478E-14 15964 20230619_1880_Aki_TMTPro18x_K_F1 125.99 114.54 18087 16089 17399 19716 20787 20816 18607 18525 17680 25317 25787 24583 23838 20393 23537 24789 23610 24653 16728 14756 17792 19625 21245 20923 18872 19266 18423 25184 25986 24845 24371 21408 23951 24830 22597 23414 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 250610000 2601 3605 2477 4784 3943 3943 2272 1 9606 Homo sapiens -0.006173622259666445 ATLYVTAIEDR Unmodified 1250.6507 0.65066678 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3S6H7G3;A0A3Q8ATF5;Q5U8W9;A0A3Q8APW9;A0A3Q8B022;A0A3Q8APX7;A0A3S6H7Z6;A0A3Q8AIR8;B4DJ87;E9PIX6;A0A3S6H765;A0A3Q8BCJ2;A0A3S6H8A6;E9PQ98;A0A3S6H950;A0A3Q8AIS2;A0A3Q8APY3;A0A3S6H960;A0A3Q8B4M4;E9PNR9;H0YDE4;A0A3S6H8W3;A0A3S6H7E4;A0A3S6H7Y8 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 yes no 0 0 0 4 0.816 1 1 1 53.949 53.995 2 9.7283E-09 15779 20230619_1883_Aki_TMTPro18x_K_F4 183.78 149.78 493520 371240 420780 464590 418250 487410 441570 463490 537510 569300 554810 517460 596960 501680 520540 609140 559330 554440 455550 340760 433700 461790 435810 490550 447020 477910 543170 568130 569960 527300 604240 523720 533300 607130 534750 527210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 390870000 2602 1536 2478 4785;4786;4787 3944;3945 3944 2 9606 Homo sapiens 0.035367474980375846 ATMEAYSR Unmodified 927.41202 0.41201641 2493 B4DT77;B4DWU2;B4DHY4;Q53HM8;P20073-2;P20073;B2R7L2 ANXA7 Annexin;Annexin A7 yes no 0 0 0 5 0 1 36.37 36.461 2 0.034494 8081 20230619_1885_Aki_TMTPro18x_K_F5 76.064 62.068 19240 14842 25606 22772 30903 31186 28529 31169 34450 22655 30568 29157 28955 23790 29291 24627 39357 29141 17833 13653 25543 22455 31582 30889 29093 31602 34559 23567 31468 29137 29627 24768 30302 25005 37488 27668 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29241000 2603 2493 2479 4788 3946 3946 1 9606 Homo sapiens -0.05459311285073909 ATMQGDREQLK Oxidation (M) 1291.619 0.61904908 1600 Q6DHZ8;B2RBM8;A0A669KBJ7;Q9H2P0;A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein yes no 0 1 1 4.5 0.5 1 1 32.938 33.008 3 0.055203 6729 20230619_1883_Aki_TMTPro18x_K_F4 52.391 21.518 38707 29667 42564 39886 48927 47113 43836 53383 60047 42311 53755 47897 48786 46555 47044 45013 60708 57837 35807 27251 42984 39549 50144 47241 45023 53769 59934 43552 55186 48361 49918 47982 48608 45986 57933 54809 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32604000 2604 1600 2480 4789;4790 3947 3947 1040 1 9606 Homo sapiens -0.015095685275582582 ATNESEDEIPQLVPIGK Unmodified 1838.9262 0.92617294 3325 O76021;J3QSV6;A0PJ61;Q32Q62;O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 0 3.5 1.12 1 1 1 1 60.096 60.11 3 6.8351E-14 18424 20230619_1882_Aki_TMTPro18x_K_F3 163.7 141.47 173900 156290 183790 200570 174900 206140 200560 205400 188820 225420 203100 201280 238010 185670 208310 238820 230740 221660 160980 143400 185870 198980 183060 207970 200470 210420 193860 225910 209250 204930 240290 194940 213750 238100 220500 210750 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 267500000 2605 3325 2481 4791;4792;4793;4794 3948;3949;3950;3951;3952 3949 5 9606 Homo sapiens 0.04026690044747738 ATNFLAHEK Acetyl (Protein N-term) 1071.5349 0.53490874 2925 P29692;P29692-3;E9PK01;P29692-4;E9PQZ1;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;E9PK06;E9PMW7;E9PN91;E9PKK3;E9PK72;E9PJD0;E9PNW6 EEF1D Elongation factor 1-delta yes no 1 0 0 4 0.816 1 1 1 47.464 47.53 2 0.0001219 12818 20230619_1883_Aki_TMTPro18x_K_F4 51.193 45.827 1196800 943020 985180 1044400 1328500 1583400 1296800 1328300 1557200 1355900 1228100 1182500 1410700 1058300 1298300 1523600 1329200 1268900 1104800 864440 1024100 1053600 1353800 1554100 1317000 1374500 1558800 1364200 1283300 1204800 1427900 1120800 1325100 1508700 1271100 1208100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2910400000 2606 2925 2482 4795;4796;4797 3953;3954;3955 3954 3 9606 Homo sapiens 0.0020026843783398363 ATNIEQIFR Acetyl (Protein N-term) 1132.5877 0.58767259 3474 P18583-5;P18583-9;P18583;P18583-7;P18583-4;P18583-3;P18583-10;P18583-6;P18583-2;A0A994J4Y9;A0A8Q3SI10;Q6ZRV7;J3QSZ5;D3DSF7;A0JLP4;Q3SWV4;P18583-8 SON Protein SON yes no 1 0 0 3.5 0.5 1 1 62.754 62.772 2 2.8279E-06 19500 20230619_1883_Aki_TMTPro18x_K_F4 129.68 92.589 37034 29292 38930 34563 35060 52940 44769 42626 49634 47629 48618 54488 49021 46464 47436 57472 57683 71633 34252 26867 39327 34720 37092 51863 44727 44383 50243 48089 49994 54724 49990 48775 48891 58331 55188 67837 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102390000 2607 3474 2483 4798;4799 3956;3957 3957 2 9606 Homo sapiens 0.026682265006684247 ATNIEVLSNTFQFTNEAR Unmodified 2054.0069 0.006882877 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;E9PLT0;E9PNG3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;A0A8I5KPQ8;A0A8I5KS07;A0A8I5KW29 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 0 7.5 0.5 1 1 61.993 62.027 3 1.9074E-48 18644 20230619_1888_Aki_TMTPro18x_K_F8 274.23 229.79 58566 61104 58145 58132 47706 65378 70250 63917 103700 54145 50858 43995 54209 40824 58137 53783 55144 50242 54244 55887 58971 59099 51141 65531 70492 65150 101470 55050 54777 45056 55395 42933 58857 53656 52756 47776 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 660910000 2608 88 2484 4800;4801 3958 3958 1 9606 Homo sapiens 0.022039710876470053 ATNLCFAER Unmodified 1080.5022 0.50222841 108 B7Z6F7;A0A024R0R6;Q92797 SYMPK Symplekin yes no 0 0 0 6 0 1 44.042 44.134 2 0.0032728 11278 20230619_1886_Aki_TMTPro18x_K_F6 115.06 101.48 113460 91586 104170 119650 117550 135620 128780 125130 145300 91473 93431 87006 86760 76753 109010 94441 106980 84305 104830 84082 106900 118700 121420 135650 129660 127690 144850 94218 98029 88247 89870 80421 110260 94112 102220 80264 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138700000 2609 108 2485 4802 3959 3959 1 9606 Homo sapiens -0.034802619566335125 ATNSMIDR Unmodified 906.42292 0.42291545 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;Q86SE4;Q7Z2J0 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 4 0 1 34.832 34.883 2 0.0091343 7488 20230619_1883_Aki_TMTPro18x_K_F4 102.62 72.051 56188 32075 59865 58038 50369 50739 53672 60192 63955 70279 93050 99590 92718 76864 86603 52221 102660 94132 51885 29614 60338 56368 53123 52055 54317 61118 65721 71336 94125 98895 94324 78790 88853 55344 98009 88994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39994000 2610 2005 2486 4803 3960 3960 1 9606 Homo sapiens -0.03403908910786413 ATNSSWVVVFK Unmodified 1236.6503 0.65027285 2874 E5RFU0;E5RHK9;E5RFC6;E5RK51;E5RIJ5;E5RGY9;E9PDG8;H0UI15;O60641-3;O60641-4;O60641 SNAP91 Clathrin coat assembly protein AP180 yes no 0 0 0 4 0 1 61.44 61.444 3 0.078879 18914 20230619_1883_Aki_TMTPro18x_K_F4 50.275 24.336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2611 2874 2487 4804 3961 3961 1 9606 Homo sapiens 0.04141372568847146 ATNVTYQAHHVSR Unmodified 1482.7328 0.7327737 3250 O43252;Q05BW9;B7Z4W3 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 8 0 2 28.093 28.119 3;4 1.8196E-05 5005 20230619_1888_Aki_TMTPro18x_K_F8 98.942 76.222 6430.1 3526.2 7667.6 7580.1 11414 11469 8167 9524.4 11403 7366.4 11475 9731 9410.8 7539.4 9730.7 9719 9482.3 11725 5932.9 3256.9 7739.5 7364.2 11466 11252 8526.9 9800.9 11419 7640.2 11667 9711.3 9680.9 7968.4 9876.7 9842.9 9090.5 11107 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6458600 2612 3250 2488 4805;4806 3962;3963 3963 2 9606 Homo sapiens 0.010716626296925824 ATNVVMNYSEIESK Unmodified 1583.7501 0.75012283 1109 A0A0S2Z4Y4;A0A0S2Z5H3;Q14677;Q14677-3 CLINT1 Clathrin interactor 1 yes no 0 0 0 6 0 1 54.767 54.844 3 1.0978E-08 15978 20230619_1886_Aki_TMTPro18x_K_F6 128.85 110.43 32712 27872 30336 35264 26875 31734 32772 33187 40235 41580 45551 47462 53136 42635 43189 52216 50659 57840 30238 25574 30994 34957 28379 32389 32944 34039 40787 41750 46820 47760 53502 44665 44557 52603 48447 54851 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75554000 2613 1109 2489 4807 3964 3964 1 9606 Homo sapiens -0.018402226701482505 ATPEQYQILK Unmodified 1189.6343 0.63428844 3449 P14324-2;P14324;A0A087X090;Q14329 FDPS Farnesyl pyrophosphate synthase yes no 0 0 0 7.67 0.471 1 2 50.803 50.88 2;3 2.4323E-05 13977 20230619_1887_Aki_TMTPro18x_K_F7 121.5 73.411 309530 241400 293590 298510 257560 279330 294060 263770 319610 337300 328370 291580 354640 305830 282540 383040 318450 316500 286010 221520 299020 296560 271360 283630 295240 272660 324680 335620 337330 298790 357720 319010 291120 379690 304330 301320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1565599999.9999998 2614 3449 2490 4808;4809;4810 3965;3966 3965 2 9606 Homo sapiens 0.04705666331938119 ATPGNLGSSVLASK Acetyl (Protein N-term) 1342.7092 0.70924429 3599 P48426 PIP4K2A Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha yes yes 1 0 0 7.5 0.5 1 1 57.892 57.942 2 0.033568 16990 20230619_1887_Aki_TMTPro18x_K_F7 64.55 46.39 65474 56273 61971 71585 63315 76144 88587 81945 90316 93036 85610 91671 104570 83781 87435 104030 101690 111290 60534 51636 63352 71092 66370 76763 87870 83620 91768 93378 88932 92848 105290 87799 90090 104570 97223 105590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75718000 2615 3599 2491 4811;4812 3967;3968 3967 2 9606 Homo sapiens 0.051598040725366445 ATPLAPK Unmodified 696.41703 0.41702544 2924 E9PJP2;Q5TF21 SOGA3 Protein SOGA3 yes no 0 0 0 1 0 1 41.778 41.778 2 0.077416 10860 20230619_1880_Aki_TMTPro18x_K_F1 70.268 11.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2616 2924 2492 4813 3969 3969 1 9606 Homo sapiens 0.05667360639858998 ATPLAVNSAASLWGPYK Acetyl (Protein N-term) 1786.9254 0.92538508 4301 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 1 0 0 2.5 0.5 1 1 65.343 65.363 2 2.0707E-23 20680 20230619_1882_Aki_TMTPro18x_K_F3 122.51 96.572 18801 16113 17593 20258 15995 20631 18253 20882 22143 18365 16134 12257 14208 11647 17591 16602 13816 9561.9 17381 14784 17967 20121 16834 20830 18401 21240 22091 18514 16734 12716 14718 12293 17613 16217 13226 9172.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30530000 2617 4301 2493 4814;4815 3970 3970 1 9606 Homo sapiens 0.06339940186376225 ATPLSSTVTLSMSADVPLVVEYK Oxidation (M) 2423.2505 0.25054355 3437 Q6FHF5;P12004;Q6FI35 PCNA Proliferating cell nuclear antigen yes no 0 1 0 7.5 0.5 1 1 62.943 62.973 4 8.5154E-05 19159 20230619_1888_Aki_TMTPro18x_K_F8 77.287 65.847 37159 30234 36953 37109 36816 38688 40277 32903 38980 41561 35633 44818 44405 35131 43811 46710 36711 46112 34357 27738 37551 36934 38317 38882 40362 34277 39694 41635 37181 44987 44987 37179 44188 46712 35258 43769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 731720000 2618 3437 2494 4816;4817 3971 3971 2063 1 9606 Homo sapiens 0.095848296269196 ATPYVTDETGGK Acetyl (Protein N-term) 1279.5932 0.59321148 4418 Q9BRP8-2 WIBG Partner of Y14 and mago yes yes 1 0 0 2 0 1 48.968 49.033 2 0.0001461 13980 20230619_1881_Aki_TMTPro18x_K_F2 96.89 70.506 125520 104440 121820 115500 140660 140110 125050 123080 164310 96531 97240 96427 119980 98923 109810 108310 110120 117220 116050 95713 124270 116110 144160 139490 128180 126220 162340 99150 103920 98034 121260 102500 111840 109200 105400 111220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81529000 2619 4418 2495 4818 3972 3972 1 9606 Homo sapiens -0.03540139498181816 ATQAHSLSYAGCNFLR Acetyl (Protein N-term) 1836.8577 0.85771622 4708 Q9Y2P8;Q5VYW8 RCL1 RNA 3'-terminal phosphate cyclase-like protein yes no 1 0 0 4.5 3.5 1 1 50.915 50.915 2 1.2651E-49 13904 20230619_1888_Aki_TMTPro18x_K_F8 187.16 168.06 13128 10034 12697 14186 13651 16081 16774 13461 17568 17169 19767 15618 16937 17758 16290 18405 18790 20817 12131 9221.5 12961 14002 14194 16052 16748 14042 17932 17116 20026 16015 17369 18274 16727 18615 17968 19739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14691000 2620 4708 2496 4819;4820 3973;3974 3974 2 9606 Homo sapiens -0.027238330160798796 ATQALVLAPTR Unmodified 1139.6663 0.66625727 2105 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3QLN6;J3KS25;J3QKZ9;B4E047;B4E102 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 0 0 2 0.816 1 1 1 47.281 47.332 2 0.00030689 12926 20230619_1882_Aki_TMTPro18x_K_F3 120.96 95.338 1346300 1057600 1082900 1284900 1360200 1674200 1433800 1445500 2022500 782770 712420 451580 573870 426740 806610 652140 628260 354840 1242600 970300 1127700 1283700 1396000 1657500 1458200 1474500 1970800 819230 785120 474130 601260 453050 805350 635700 600940 341190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1451700000 2621 2105 2497 4821;4822;4823 3975;3976 3976 2 9606 Homo sapiens 0.10201078805744146 ATQASQEY Unmodified 896.38758 0.3875758 3459 P16104 H2AFX Histone H2AX yes yes 0 0 0 1.5 0.5 1 1 36.96 36.991 2 0.0030553 8778 20230619_1880_Aki_TMTPro18x_K_F1 120.52 108.03 38217 21916 48848 47114 72182 84398 50899 68435 62001 34619 52579 66618 45444 54352 57224 28291 75500 74415 35354 20289 49077 45941 72587 82064 52946 70045 62068 37816 54198 65695 47302 55070 58822 31527 72054 70195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214910000 2622 3459 2498 4824;4825 3977 3977 1 9606 Homo sapiens -0.06476248166950427 ATQCEDLLSQAK Unmodified 1362.6449 0.64492948 935 A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBF7;H0YBM4 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 4.5 0.5 1 1 48.884 48.942 3 0.0015506 13489 20230619_1883_Aki_TMTPro18x_K_F4 69.971 49.308 105920 76815 104760 93113 83762 105350 110180 92577 113840 107130 124400 119380 128160 108080 114810 135550 133690 125360 97866 70498 106150 92891 89461 105290 109680 95912 116140 107900 127270 120330 130050 113290 118130 135150 127670 119210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183420000 2623 935 2499 4826;4827 3978 3978 1 9606 Homo sapiens -0.021887190759343866 ATQELIPIEDFITPLK Unmodified 1827.003 0.002966698 4569 Q9NQ50 MRPL40 39S ribosomal protein L40, mitochondrial yes yes 0 0 0 6.5 0.5 1 1 65.369 65.404 3 0.038511 20513 20230619_1886_Aki_TMTPro18x_K_F6 45.82 11.641 28303 24903 29296 34261 28594 32719 28551 30710 38100 33264 33043 36665 38628 31549 33680 43263 37506 41472 26191 22868 29694 33796 29779 33149 29098 31588 38072 33595 34406 36901 39009 33333 34601 43156 35876 39395 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 262120000 2624 4569 2500 4828;4829 3979 3979 1 9606 Homo sapiens 0.12254533331906714 ATQEWLEK Unmodified 1003.4975 0.4974606 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;Q14980-5;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 4.5 0.5 1 1 50.528 50.581 2 1.0028E-06 14006 20230619_1885_Aki_TMTPro18x_K_F5 200.27 137.21 284630 231980 269380 273650 308850 358320 336200 328200 364000 333630 395500 400510 384300 323960 356620 355890 410810 378320 263070 212750 275590 274090 318570 355180 338260 337490 370350 338960 403850 400940 391250 338380 366080 358430 392310 359210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 249580000 2625 349;3906 2501 4830;4831 3980;3981 3981 2 9606 Homo sapiens -0.004148228277585986 ATQGEQDNYEMHVR Oxidation (M) 1692.7162 0.71619694 512 E9PGW7;Q5T8T7;E7EN96;Q5T8T8;A0A024R8C5;Q15528-2;Q15528 MED22;SURF5 Mediator of RNA polymerase II transcription subunit 22 yes no 0 1 0 1.5 0.5 1 1 31.091 31.124 3 7.3817E-09 6130 20230619_1881_Aki_TMTPro18x_K_F2 155.09 144.15 7789.1 5262.1 7344.6 8446.5 12073 11680 11130 11093 9672.8 8015.3 11815 14058 10432 10336 12108 10378 12180 15836 7191.1 4846.3 7575.5 8304.7 12123 11550 11230 11291 10013 8447.5 11982 13867 10780 10784 12279 10738 11678 14970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23991000 2626 512 2502 4832;4833 3982;3983 3983 306 2 9606 Homo sapiens -0.10245251109245146 ATQGEQDNYEMHVR Unmodified 1676.7213 0.72128232 512 E9PGW7;Q5T8T7;E7EN96;Q5T8T8;A0A024R8C5;Q15528-2;Q15528 MED22;SURF5 Mediator of RNA polymerase II transcription subunit 22 yes no 0 0 0 2 0 1 35.165 35.222 3 3.9461E-70 7750 20230619_1881_Aki_TMTPro18x_K_F2 281.68 277.44 19620 13952 17832 19873 25833 28792 22371 24174 28960 22433 26795 28292 27197 23656 25719 26501 33165 33614 18113 12827 18396 19687 26125 28322 22959 24959 29025 22958 27621 28301 27688 24711 26593 26980 31663 31850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48504000 2627 512 2502 4834 3984 3984 1 9606 Homo sapiens -0.09000947246613578 ATQGPGLAAR Unmodified 940.50903 0.50902834 739 H7C2Z0;A0A024RCZ1;Q8NC56 LEMD2 LEM domain-containing protein 2 yes no 0 0 0 7 0.816 1 1 1 33.404 33.445 2 0.00029232 6664 20230619_1887_Aki_TMTPro18x_K_F7 133.13 100.78 40043 22566 46106 47101 62252 64894 54408 65156 73744 40834 49730 59917 49584 41057 60929 29034 67269 56775 37001 20882 46577 45744 63159 64226 55915 65855 72969 43191 52241 59256 51163 42373 61918 31029 64229 53670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 30691000 2628 739 2503 4835;4836;4837 3985;3986;3987 3986 3 9606 Homo sapiens 0.036394189862335224 ATQMPEGGQGAPPMYQLYK Unmodified 2065.9601 0.96013238 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 1 0 1 56.82 56.82 3 4.0311E-05 17188 20230619_1880_Aki_TMTPro18x_K_F1 90.654 80.458 25651 22111 27833 29506 26023 33776 31615 29885 32764 37064 33266 35074 40175 30764 32159 45200 35726 39895 23743 20299 28084 29239 27352 33725 31590 30994 33369 37007 34419 35559 40381 32650 33114 44851 34176 37933 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58637000 2629 3758 2504 4838 3988 3988 1 9606 Homo sapiens -0.030209280594590382 ATQMPEGGQGAPPMYQLYK 2 Oxidation (M) 2097.95 0.94996162 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 2 0 7 0 1 48.948 49.034 3 0.010755 13151 20230619_1887_Aki_TMTPro18x_K_F7 51.942 35.819 18840 15875 19757 19939 19368 20264 18200 19297 17637 22205 19887 22772 27087 18755 21549 23510 21410 22089 17432 14566 19984 19808 20101 20449 18418 19859 18128 22290 20633 22944 27120 19748 22012 23465 20491 20993 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59299000 2630 3758 2504 4839 3989 3989 2431;2432 1 9606 Homo sapiens -0.05509535784722175 ATQMPEGGQGAPPMYQLYK Oxidation (M) 2081.955 0.955047 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 8 0 2 53.771 53.842 3 0.0069254 15198 20230619_1888_Aki_TMTPro18x_K_F8 60.09 50.302 48882 43003 64193 62574 47319 51245 56773 55413 53686 65874 63851 73889 61416 55555 68005 76130 64865 73583 45338 39515 63667 61435 50668 52768 56654 56637 55329 66209 65023 73996 63088 58971 68914 76006 62153 69885 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81321000 2631 3758 2504 4840;4841 3990;3991 3990 2431;2432 2 9606 Homo sapiens -0.04265231922045132 ATQQQHDFTLTQTADGR Unmodified 1916.8977 0.89766678 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4.6 1.36 1 2 1 1 38.587 38.645 3 3.9937E-30 9048 20230619_1882_Aki_TMTPro18x_K_F3 229.02 198.47 67411 59339 61628 67062 75160 78247 71398 77876 82532 80902 94388 89549 97160 73933 82333 96742 88943 94942 62319 54381 63313 67255 76886 78293 72581 79638 83923 81851 96356 90040 98301 78017 84430 96706 85078 90174 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1161400000 2632 3758 2505 4842;4843;4844;4845;4846 3992;3993;3994;3995 3992 4 9606 Homo sapiens -0.024106148118335113 ATQRPPYCDGTHR Unmodified 1557.7107 0.71065805 3425 P0C7P0 CISD3 CDGSH iron-sulfur domain-containing protein 3, mitochondrial yes yes 0 0 1 6 0 1 27.216 27.25 4 7.7988E-05 4823 20230619_1886_Aki_TMTPro18x_K_F6 115.83 103.85 5294.7 5172.7 6317.8 5840.5 8344.2 5937.7 7918.9 6562.3 7912.1 6108 6673 8498.8 7615.3 11027 9240.3 9038.4 10436 11175 4909.6 4738.8 6357.2 5849 8464 6021.9 8004.7 6654.4 8008.8 6277.9 6965.2 8603.5 7853.9 11167 9432.2 9237 9978.5 10589 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8385900 2633 3425 2506 4847 3996 3996 1 9606 Homo sapiens -0.04588885110410956 ATQSYLQEK Unmodified 1066.5295 0.52948901 3610 Q8NF45;P49750;H0YIQ2;F8VU51;Q86YA8 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 0 6 0 1 43.233 43.327 2 5.478E-06 10915 20230619_1886_Aki_TMTPro18x_K_F6 202.2 146.82 54890 34364 50250 58101 74917 81920 60585 72240 87614 45543 50569 38776 43960 41090 55956 35791 63704 43529 50645 31682 51846 56983 75539 80757 62742 73700 86122 47347 53276 39798 45702 42036 56992 36557 60737 41336 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19111000 2634 3610 2507 4848 3997 3997 1 9606 Homo sapiens -0.0011145514461077255 ATQTHVEAVYSR Unmodified 1360.6735 0.67352749 2725 B9EK47;Q9P2D3-3;Q9P2D3;Q9P2D3-2 HEATR5B HEAT repeat-containing protein 5B yes no 0 0 0 5.5 0.5 1 1 33.542 33.605 3 6.9691E-14 7106 20230619_1886_Aki_TMTPro18x_K_F6 186.51 168.41 41296 31447 37969 37952 37433 37383 43336 41135 55050 49038 54113 43999 59459 48036 52609 58460 59423 47576 38143 28853 38835 37802 39076 37948 43711 41978 55360 49007 55724 45093 60177 49969 54020 57960 56707 45347 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34920000 2635 2725 2508 4849;4850 3998;3999 3999 2 9606 Homo sapiens 0.007617666155283587 ATSCFPR Unmodified 837.38032 0.38032236 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 8 0 1 36.221 36.208 2 0.03933 7972 20230619_1888_Aki_TMTPro18x_K_F8 91.041 42.537 71875 55618 62173 63352 68768 97820 72293 82823 102200 49492 40276 39852 54174 41689 47350 64019 76778 50400 66364 50999 64099 63801 71260 95887 73586 84691 99819 51632 44842 41033 54574 44134 49971 63159 72994 48111 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46417000 2636 349;3906 2509 4851 4000 4000 1 9606 Homo sapiens -0.04487259248355713 ATSEEDVSIK Unmodified 1077.519 0.51898391 4071 Q5UIP0-2;Q5UIP0 RIF1 Telomere-associated protein RIF1 yes no 0 0 0 2 0 1 43.163 43.245 2 8.7458E-06 11324 20230619_1881_Aki_TMTPro18x_K_F2 147.95 75.462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2637 4071 2510 4852 4001 4001 1 9606 Homo sapiens -0.016674825897098344 ATSFLLALEPELEAR Unmodified 1658.8879 0.88793694 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;F8WF32 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 5.5 0.5 1 1 64.743 64.788 3 4.4388E-14 20086 20230619_1885_Aki_TMTPro18x_K_F5 179.39 150.63 85091 58765 62715 75201 78341 54333 80499 86931 82829 86313 83961 64477 87908 72975 73780 102930 91284 78817 78433 53973 65839 74349 79984 57360 81125 86518 84346 86562 86125 66870 88929 76575 76398 101520 87084 75162 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1110800000 2638 3384 2511 4853;4854 4002;4003 4002 2 9606 Homo sapiens 0.08484848920807053 ATSGTEHQFCGGR Unmodified 1406.5997 0.59971062 3917 Q15113 PCOLCE Procollagen C-endopeptidase enhancer 1 yes yes 0 0 0 5.67 1.7 1 1 1 29.425 29.48 3 5.0668E-06 5490 20230619_1888_Aki_TMTPro18x_K_F8 125.82 115.17 32994 23682 29264 28166 33955 37481 41540 37198 43415 34372 40030 43876 39298 37134 34220 32213 48547 44101 30457 21732 30110 28209 35103 37186 41479 37951 43948 35192 41223 43856 39931 38263 35661 33128 46280 41778 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 16500000 2639 3917 2512 4855;4856;4857 4004;4005;4006;4007 4007 4 9606 Homo sapiens -0.08732524818469756 ATSIDPNTYITWIDK Unmodified 1736.8621 0.86211612 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 8 0 1 63.277 63.3 2 0.023637 19214 20230619_1888_Aki_TMTPro18x_K_F8 59.57 42.996 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2640 3881 2513 4858 4008 4008 1 9606 Homo sapiens 0.02315954678442722 ATSLGRPEEEEDELAHR Unmodified 1937.9079 0.90789711 3557 P36551;D6RER6;P36551-2 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes no 0 0 1 1 0 1 38.411 38.411 4 1.1272E-23 9397 20230619_1880_Aki_TMTPro18x_K_F1 213.36 189.56 52403 38928 59564 58843 55244 54611 50215 68034 60485 97687 104170 133600 135710 124490 111670 104840 165420 164280 48482 35810 59821 57738 57535 55854 51359 69330 62963 98144 106400 133530 136460 127720 116890 109020 157740 155410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129310000 2641 3557 2514 4859 4009 4009 1 9606 Homo sapiens -0.02354051877227903 ATSNVFAMFDQSQIQEFK Unmodified 2089.9779 0.97789093 3147 Q53HL1;J3QRS3;P19105;O14950;Q2F834;Q71U02;Q6IBG1;A0A384NY64;P24844;J3KTJ1;P24844-2 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 0 0 1.5 0.5 1 1 63.908 63.912 3 0.0001451 20152 20230619_1880_Aki_TMTPro18x_K_F1 84.035 72.421 12264 11924 14615 10678 9141 18112 12375 16083 12487 18603 16344 18480 22968 14665 18696 21888 20114 24816 11371 10903 14554 11001 10070 17690 12318 16615 12902 18645 16892 18634 22993 15665 19183 22028 19264 23523 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80027000 2642 3147 2515 4860;4861 4010 4010 1 9606 Homo sapiens -0.023498895329339575 ATSSSSGSLSATGR Unmodified 1267.6004 0.60042213 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 0 0 6 0.816 1 1 1 31.39 31.46 2 8.7367E-20 6303 20230619_1886_Aki_TMTPro18x_K_F6 218.62 192.02 34327 17156 45849 40727 54214 57695 50228 59832 48568 30717 58805 70385 49457 51095 57809 20707 67088 61783 31752 15924 45711 39389 55479 57046 50870 60174 49873 33808 59546 68925 51230 51725 58934 23728 64063 58266 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 79393000 2643 1473 2516 4862;4863;4864 4011;4012;4013 4012 3 9606 Homo sapiens -0.022674068977494244 ATSSTQSLAR Unmodified 1020.52 0.51998696 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 6 0.816 1 1 1 30.932 31.001 2 0.0013033 6148 20230619_1886_Aki_TMTPro18x_K_F6 109.29 70.968 25985 11408 31695 27227 51569 60840 33336 40706 38163 12050 19587 14367 16394 15831 27595 6678 20197 16907 24001 10599 31993 26594 51529 58449 34831 42162 37792 13848 20821 14560 17378 15807 27336 7501 19373 15962 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35955000 2644 349;3906 2517 4865;4866;4867 4014;4015 4014 2 9606 Homo sapiens 0.010547765698561307 ATSTATSGFAGAIGQK Unmodified 1466.7365 0.73652168 1097 P51659;A0A0S2Z4J1;B2R659;E7EPL9;A0A804HK65;A0A2R8YD50;P51659-2;P51659-3;B4DSD0;B4DDM5;A0A804HKU2;A0A2R8Y7L2;B4DI68;E7ET17;B3KSP2;E7ER27;A0A804HIR1;Q59H27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 0 0 0 1.5 0.5 1 1 49.288 49.317 3 1.6697E-14 14144 20230619_1881_Aki_TMTPro18x_K_F2 176.89 160.54 405080 354190 377840 365760 348420 435970 437910 379370 503450 473150 510200 461710 473730 463670 423800 549520 587870 566760 374520 324350 385680 369570 367160 434290 438280 394110 509250 473050 521160 469600 482890 482560 441570 551420 560730 538210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 435190000 2645 1097 2518 4868;4869 4016 4016 1 9606 Homo sapiens 0.021822876129135693 ATSTSDMLLK Unmodified 1065.5376 0.53761086 4611 Q9NW64-2;Q9NW64;E5RJW4 RBM22 Pre-mRNA-splicing factor RBM22 yes no 0 0 0 7 0 1 50.127 50.208 3 0.012908 13675 20230619_1887_Aki_TMTPro18x_K_F7 72.243 31.975 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2646 4611 2519 4870 4017 4017 1 9606 Homo sapiens 0.007463557805067467 ATTADGSSILDR Unmodified 1205.5888 0.58879481 1127 B3KM48;A0A0S2Z5H7;D6RAX7;Q9BT78;Q53FV3;Q9BT78-2;D6RD63 COPS4 COP9 signalosome complex subunit 4 yes no 0 0 0 3 0 1 42.222 42.284 2 1.4344E-17 10575 20230619_1882_Aki_TMTPro18x_K_F3 231.42 168 120190 93152 97237 123720 122450 140350 142580 138360 168290 149790 164980 172400 174330 144980 136570 188280 182440 163540 110920 85548 101260 122590 125850 140580 143320 141800 169790 151490 169840 173110 175850 152690 142350 186980 173990 155660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137120000 2647 1127 2520 4871 4018 4018 1 9606 Homo sapiens -0.005776039210786621 ATTATMATSGSAR Acetyl (Protein N-term);Oxidation (M) 1282.5823 0.58232922 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 1 1 0 2.5 0.5 1 1 30.395 30.475 2 0.00018166 5961 20230619_1881_Aki_TMTPro18x_K_F2 68.355 62.252 5629.7 4544.1 6941 7021.9 8705.5 10304 8665.4 11744 9319.2 5687 12841 12538 9056.1 9853.2 10821 6796.5 10772 9394.4 5215.2 4179.8 6970.9 6930 8902.9 10194 8769.7 11726 9568.1 6280 12844 12332 9457.9 10078 10947 7041.1 10298 8900.3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9808900 2648 543 2521 4872;4873 4019;4020 4019 319 2 9606 Homo sapiens -0.04765865144122472 ATTATMATSGSAR Acetyl (Protein N-term) 1266.5874 0.5874146 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 1 0 0 2.5 0.5 1 1 35.593 35.65 2 5.838100000000001E-29 7829 20230619_1882_Aki_TMTPro18x_K_F3 163.65 153.62 14037 11291 18311 20380 25734 27206 21315 23253 27350 21804 24751 29445 22486 19940 25629 16256 27620 28252 13011 10408 18369 19903 26012 26888 21936 23984 27405 22352 25456 29184 23178 20697 26062 17098 26412 26705 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 244100000 2649 543 2521 4874;4875 4021;4022 4022 2 9606 Homo sapiens -0.035215612814909036 ATTGLKPVDSGCVAYVLR Unmodified 1905.9982 0.99823245 466 A0A024R7P3;A0A024R7N2;Q9HD20-2;Q9HD20 ATP13A1 Manganese-transporting ATPase 13A1 yes no 0 0 1 3 0 1 53.079 53.138 3 0.0007452 15568 20230619_1882_Aki_TMTPro18x_K_F3 72.359 59.732 59372 48486 60070 59019 52762 67372 67910 63196 68409 68580 70465 70711 80185 63240 66335 82454 93098 79778 54904 44479 60864 58859 55842 67376 67616 65006 69756 69086 72625 71462 80868 66517 69255 82351 88725 75851 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 391130000 2650 466 2522 4876 4023 4023 1 9606 Homo sapiens 0.08147325917479975 ATTGTPTADRGDAAATDDPAAR Acetyl (Protein N-term) 2142.9778 0.97776759 1373 A0A2R8YF65;Q86TI2-4;Q86TI2 DPP9 Dipeptidyl peptidase 9 yes no 1 0 1 1 0 1 34.899 34.899 3 6.3243E-17 7948 20230619_1880_Aki_TMTPro18x_K_F1 113.51 105.01 2641.7 2432 2505.6 3423.3 4181.8 4734.8 2524 1609.2 3184.7 4011.2 3918.8 4048 3984 3198.6 3598.4 3009.7 4514 5448.8 2443.6 2233.5 2586.5 3386.7 4169.5 4616.6 2660.4 1928.3 3243.1 3928.9 3989.4 4073.3 4044.7 3323.1 3713.2 3165.2 4316.6 5146 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21328000 2651 1373 2523 4877 4024 4024 1 9606 Homo sapiens -0.04800217999263623 ATTHEIMGPK Oxidation (M) 1099.5332 0.53319418 348 B5BU72;A0A024R5L7;A8K5U9;A0A024R5P1;Q13492-3;Q13492-2;Q13492-5;Q13492;E9PK13;E9PJT1 PICALM Phosphatidylinositol-binding clathrin assembly protein yes no 0 1 0 5.5 0.5 1 1 34.169 34.235 3 0.00032971 7353 20230619_1886_Aki_TMTPro18x_K_F6 105.98 63.58 45468 33742 47006 49517 55272 56281 52320 49880 53073 50901 64460 57689 62635 52879 52438 52336 65897 55613 42031 31028 47754 48777 56627 56248 52963 51442 54466 51604 65465 58118 63498 54678 54238 52798 62849 52825 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72681000 2652 348 2524 4878;4879 4025;4026 4026 204 2 9606 Homo sapiens -0.012591086424208697 ATTHEVMGPK Oxidation (M) 1085.5175 0.51754412 2874 E5RFU0;E5RHK9;E5RFC6;E5RK51;E5RIJ5;E5RGY9;E9PDG8;H0UI15;O60641-3;O60641-4;O60641;E5RK53;E5RGP8;E5RJY3;O60641-2 SNAP91 Clathrin coat assembly protein AP180 yes no 0 1 0 5 0 1 31.858 31.938 3 0.0024048 6347 20230619_1885_Aki_TMTPro18x_K_F5 76.228 64.002 17194 10957 16401 13759 7579 6890 9761.1 8285.3 9887.7 12667 20622 20712 18274 15448 16372 13562 24262 17889 15871 10065 16569 13586 8619.2 7530.7 9745.1 8508.4 10485 12802 20547 20475 18636 16008 17097 13914 23093 16968 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15849000 2653 2874 2525 4880 4027 4027 1706 1 9606 Homo sapiens -0.021793951594645478 ATTPADGEEPAPEAEALAAAR Unmodified 2036.9651 0.96507764 2307 Q5JZ02;B2RCM6;Q96S44 TP53RK TP53-regulating kinase yes no 0 0 0 1 0 1 49.755 49.755 3 1.7323E-16 14280 20230619_1880_Aki_TMTPro18x_K_F1 119.38 113.21 14608 11446 15065 15287 18227 18379 14727 19088 20501 19301 21789 19888 18854 18627 16150 18871 21108 22229 13508 10512 15310 15164 18585 18368 15247 19440 20607 19514 22146 20125 19228 19263 16759 19141 20156 21074 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60213000 2654 2307 2526 4881 4028 4028 1 9606 Homo sapiens -0.011926293914712005 ATTPVIMVGPGTGVAPFIGFIQER Unmodified 2457.309 0.3090019 1810 P16435;Q59ED7;A8K3B4;B2R6E5;Q63HL4;A0A8V8NE24;H0Y4R2;B4DJI8;B4DDH3;B4DKM8;E7EMD0;B4E305 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase yes no 0 0 0 4 0 1 65.316 65.326 3 2.2967E-08 20559 20230619_1883_Aki_TMTPro18x_K_F4 97.352 88.962 3605 1838.9 2427.2 2555.3 2808.7 2623.1 1557.6 4031.1 3652.1 3683.9 3934.3 6212.7 6016.3 3958.2 3959.7 5418.1 6106.8 5863.6 3316.6 1693.1 2567.7 2524.1 2858.4 2679.7 1715.7 4004.4 3617.5 3813.9 4126.8 6110.1 5970.7 4238 4188.7 5441.4 5820.5 5565.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11507000 2655 1810 2527 4882 4029 4029 1 9606 Homo sapiens 0.13863975782669513 ATTSGSNSISVR Unmodified 1178.5891 0.58912916 1330 A0A220T1R9;Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes no 0 0 0 6.5 0.5 1 1 33.921 33.985 2 5.5012E-05 6895 20230619_1887_Aki_TMTPro18x_K_F7 129.16 106.42 6917.5 5894.2 10105 6931.9 10309 16761 8949.1 10882 10642 8156.3 10401 14378 10650 9463.9 9941.8 6691.9 13837 12155 6422.4 5404.4 9989.8 7045.2 10693 16051 9165.2 11439 10729 8583 10721 14126 10835 9778.9 10317 7087.3 13189 11493 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6856500 2656 1330 2528 4883;4884 4030 4030 1 9606 Homo sapiens 0.006978157987759914 ATVECVK Unmodified 805.40039 0.4003891 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;E9PLT0;E9PNG3;Q9UG93;Q8WU01;Q9UG12 CSDE1;UNR;DKFZp586J0620;DKFZp566C233 Cold shock domain-containing protein E1 yes no 0 0 0 5 0 1 39.573 39.663 2 0.056552 9410 20230619_1885_Aki_TMTPro18x_K_F5 86.953 47.291 19948 12346 20976 21296 24955 26911 23531 22768 24280 22082 29122 22313 23317 24573 24659 17314 25954 26957 18425 11386 21283 20829 25557 26678 23838 23528 24868 22374 29355 22732 24073 24886 25082 18083 24827 25498 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29758000 2657 88 2529 4885 4031 4031 1 9606 Homo sapiens -0.010095083084024736 ATVEELK Unmodified 788.42798 0.42798405 3127 Q86Y74;J3KPP4;O95232;A8K3C5;B4DJ96;H0YA81 CROP;LUC7L3 Luc7-like protein 3 yes no 0 0 0 3.5 0.5 1 1 44.758 44.817 2 0.0060876 11651 20230619_1883_Aki_TMTPro18x_K_F4 143.85 48.06 188850 115560 201210 233700 259120 298150 237410 223540 266050 233500 319770 313990 272350 256060 241260 167680 346720 328980 174440 106840 204460 226810 264070 294640 241530 233890 271340 238010 323380 312910 278210 261470 251260 179220 330590 310820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 279670000 2658 3127 2530 4886;4887 4032 4032 1 9606 Homo sapiens 0.02530718223488293 ATVEPETTPTPNPPTTEEEK Acetyl (Protein N-term) 2209.0274 0.027403127 3393 P06730;P06730-2;B7Z2T1;D6RFJ3 EIF4E Eukaryotic translation initiation factor 4E yes no 1 0 0 1 0 1 49.613 49.613 3 5.1531E-16 14136 20230619_1880_Aki_TMTPro18x_K_F1 110.74 100.68 32344 19277 27217 32306 27385 32468 28953 29338 46086 37901 41259 53664 50575 48312 35092 69520 59565 72390 29818 17775 28107 31530 28540 32726 29629 30433 45769 38355 43026 53598 50658 51100 37504 69562 56844 68679 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292350000 2659 3393 2531 4888 4033 4033 1 9606 Homo sapiens -0.02874947833834085 ATVLNYLPK Unmodified 1017.5859 0.58588168 2768 CON__ENSEMBL:ENSBTAP00000024146;B7Z7M2;B2R950;P20742-2;P01023;P20742 PZP;A2M Pregnancy zone protein;Alpha-2-macroglobulin yes no 0 0 0 3.5 0.5 2 2 58.442 58.458 2;3 0.00454 17801 20230619_1882_Aki_TMTPro18x_K_F3 74.162 37.828 + 32711 38760 39644 35444 88651 109930 75457 70832 93494 33314 44594 45254 36053 35216 54835 38290 41219 48739 30385 35428 40448 37036 87948 104570 77294 73997 92075 36193 47725 45097 38003 36806 54590 39066 39622 46154 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65508000 2660 2768 2532 4889;4890;4891;4892 4034;4035 4034 2 9606 Homo sapiens 0.07779217482720924 ATVLTTER Unmodified 889.4869 0.48689592 4685 Q9UMS4;F5GY56;H0YGF3;F5H2I0 PRPF19 Pre-mRNA-processing factor 19 yes no 0 0 0 4.5 0.5 1 1 37.794 37.861 2 9.646E-05 8648 20230619_1883_Aki_TMTPro18x_K_F4 180.93 152.82 332890 217200 288750 308560 382380 399180 355410 374990 488200 301360 339830 294970 333310 268660 315290 261760 390330 305610 307090 199770 298490 305190 389220 396140 363890 382650 483320 308720 355030 298980 339570 277810 324720 265820 372150 290110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 766480000 2661 4685 2533 4893;4894 4036;4037 4036 2 9606 Homo sapiens 0.03773194517805223 ATVMDVKPVDYR Oxidation (M) 1408.7021 0.70205043 3514 P27694;I3L4R8 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes no 0 1 1 6.5 0.5 1 1 42.839 42.923 3 0.048179 10426 20230619_1887_Aki_TMTPro18x_K_F7 53.754 43.8 127950 89378 111200 128910 148520 156230 135610 144450 153390 139830 157880 167150 173610 145270 149640 158260 163280 166860 118070 82194 115010 127230 150970 155600 138060 148240 155440 142410 162510 167700 175530 151260 153380 159300 156120 158380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84265000 2662 3514 2534 4895;4896 4038 4038 2183 1 9606 Homo sapiens 0.014047482004343692 ATVMDVKPVDYR Unmodified 1392.7071 0.7071358 3514 P27694;I3L4R8 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes no 0 0 1 7.5 0.5 1 1 47.686 47.759 3 1.6284E-05 12568 20230619_1888_Aki_TMTPro18x_K_F8 133.07 109.47 250690 210160 201890 217910 229550 260960 226480 242050 276780 275570 257100 274430 294020 258260 305350 296140 274230 289330 231470 192490 209650 220090 236440 260260 230130 249400 278500 276710 266530 278040 299470 268900 308530 296670 262780 274820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 438650000 2663 3514 2534 4897;4898 4039 4039 1 9606 Homo sapiens 0.026490520630659375 ATVNLLGEEK Unmodified 1072.5764 0.57643921 2233 B7Z6B3;B7Z2A3;B2R6C4;Q00765 REEP5 Receptor expression-enhancing protein;Receptor expression-enhancing protein 5 yes no 0 0 0 5 0 1 51.643 51.718 2 2.7342E-09 14502 20230619_1885_Aki_TMTPro18x_K_F5 226.2 172.23 79962 58865 64402 77735 58240 84555 81416 85656 111290 93700 104440 140750 139330 125120 89214 184020 183190 231110 73773 54068 66738 77022 61854 84941 81660 87658 111350 95739 109180 140280 138890 132720 97326 186260 174700 218830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59785000 2664 2233 2535 4899 4040 4040 1 9606 Homo sapiens 0.04305404406522939 ATVNTFGYIAK Unmodified 1183.6237 0.62372375 3309 O75533;H7C341 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 0 3 0 1 54.209 54.256 2 2.0332E-12 16063 20230619_1882_Aki_TMTPro18x_K_F3 251.64 183.15 114560 98468 109680 120460 104200 138160 125810 124280 135130 126290 124470 119680 123760 99548 122500 139950 129670 128000 105920 90318 111840 120070 109440 137980 125900 127980 136700 127330 128170 121170 126250 105500 125090 139260 123980 121710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33464000 2665 3309 2536 4900 4041 4041 1 9606 Homo sapiens 0.03925683677516645 ATVQLITNPFIGLLTNR Unmodified 1870.0676 0.06763264 3799 Q05940-2;Q05940 SLC18A2 Synaptic vesicular amine transporter yes no 0 0 0 8 0 1 65.762 65.781 3 0.00014719 20275 20230619_1888_Aki_TMTPro18x_K_F8 67.645 49.281 6377.5 4206.5 6279.1 7092.7 5157.3 6098 6095 3793.7 6501.2 7643.9 8385.6 9835.9 6951.4 7840.3 7289.5 9184 6946.7 7764 5889.2 3877.1 6374.6 6905.2 5474 6186.3 6102.8 4151.4 6677.4 7587 8462.9 9811.2 7167.7 8210.2 7399.2 9124.3 6655.5 7386.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14047000 2666 3799 2537 4901 4042 4042 1 9606 Homo sapiens 0.16740152928559837 ATVQQLEGR Acetyl (Protein N-term) 1042.5407 0.5407224 2888 E7DVW5;Q01469 FABP5 Fatty acid-binding protein, epidermal yes no 1 0 0 1 0 1 43.9 43.9 2 2.7543E-17 11791 20230619_1880_Aki_TMTPro18x_K_F1 157.58 126 56767 86955 53985 43960 67880 83527 60780 60333 65090 54002 73140 79603 65977 66620 70986 46967 81972 87409 52755 79166 55228 48601 69293 81045 61844 63045 66335 55731 74411 79151 67877 68110 72565 49860 78362 82573 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2936699999.9999995 2667 2888 2538 4902 4043 4043 1 9606 Homo sapiens 0.021153669495333816 ATVQSVLLDSAGK Unmodified 1287.7034 0.70343063 2512 H0YGU3;H7BZ81;H7C3J0;B4DKE1;Q6NUM9-2;Q6NUM9 RETSAT All-trans-retinol 13,14-reductase yes no 0 0 0 8 0 1 57.374 57.426 3 0.014166 16789 20230619_1888_Aki_TMTPro18x_K_F8 63.185 43.089 28587 28470 30542 30119 31583 39629 33271 31767 36845 32001 40373 38514 34109 35863 38079 35747 37582 41158 26485 26066 30883 30415 32802 39169 33566 33008 37442 32547 40980 38725 35242 37048 38614 36240 35988 39021 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25376000 2668 2512 2539 4903 4044 4044 1 9606 Homo sapiens 0.07108705560858652 ATVTPSPVK Unmodified 898.51238 0.51238239 4497 Q9H1E3;Q9H1E3-2 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes no 0 0 0 4.5 3.5 1 1 41.463 41.462 2;3 0.00010991 10076 20230619_1888_Aki_TMTPro18x_K_F8 176.44 133.61 230550 163680 239200 261160 646040 970870 454110 508800 922300 10606 13444 29545 27306 25924 77081 25103 43880 25977 213070 150700 248940 264290 636740 916050 482320 537380 873300 31795 40951 28967 29750 26776 75368 25461 42181 24730 2 2 2 2 2 2 2 2 2 1 1 2 2 2 2 2 2 2 214160000 2669 4497 2540 4904;4905 4045;4046 4046 2 9606 Homo sapiens 0.05906669040234647 ATVVGPDSSK Unmodified 959.49238 0.49237523 1532 A0A3B3IUD7;Q14690 PDCD11 Protein RRP5 homolog yes no 0 0 0 5 0 1 40.21 40.3 2 0.0013643 9670 20230619_1885_Aki_TMTPro18x_K_F5 123.75 94.276 39785 23503 36080 39423 54337 67831 41095 52377 57851 41211 52002 60569 46810 48584 53467 40062 65344 72275 36696 21673 37258 38833 54748 66021 42741 54229 57702 42873 53471 60162 48334 50060 54831 42239 62454 68281 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20265000 2670 1532 2541 4906 4047 4047 1 9606 Homo sapiens 0.011008733096332435 ATVVVGDLHPLR Unmodified 1275.7299 0.72992016 2755 C9JJU7;Q9NSI2-2;Q9NSI2 FAM207A Protein FAM207A yes no 0 0 0 8 0 1 47.506 47.564 3 5.6224E-18 12440 20230619_1888_Aki_TMTPro18x_K_F8 200.76 167.02 30903 23561 29013 28515 26254 32719 33271 34333 37422 35856 39593 42410 44285 34014 37279 42252 51796 44685 28549 21618 29592 28456 27712 32794 33277 34998 37969 36349 40740 42471 44706 35815 38855 42448 49368 42442 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189670000 2671 2755 2542 4907 4048 4048 1 9606 Homo sapiens 0.10308439242839995 ATVWDEAEQDGIGEEVLK Acetyl (Protein N-term) 2029.948 0.94803059 4761 R4GNH3;A8K781;E9PN50 PSMC3 yes no 1 0 0 1 0 1 65.041 65.041 2 1.1756E-18 20553 20230619_1880_Aki_TMTPro18x_K_F1 90.926 79.06 7284 5354.2 7690.6 7618.6 6054.1 7757.4 6910.2 6902 9743.5 8464.7 7000.6 6895.3 10010 7634.2 8204.9 10285 7077.7 9895.1 6734.2 4922 7753.8 7508.1 6453.6 7810 7007.2 7152.8 9659.3 8429.8 7441.8 7100.6 10029 7996.8 8325.5 10264 6802.3 9392.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29845000 2672 4761 2543 4908 4049 4049 1 9606 Homo sapiens -0.025745499973481856 ATYIHNCLK Unmodified 1118.5543 0.55426398 851 A0A087WY55;Q9NP79;Q9C063;Q5TGM0;Q9NP79-2 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes no 0 0 0 2 0 1 41.127 41.203 3 0.00034884 10328 20230619_1881_Aki_TMTPro18x_K_F2 117.7 91.184 257550 192960 227730 232090 300070 350890 290680 304470 389950 99864 119940 125220 119140 98501 168130 99287 143630 119010 237790 177050 234970 232720 306110 344610 296460 308690 379910 113230 135880 125210 124060 102550 168350 101100 137490 112920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166150000 2673 851 2544 4909 4050 4050 1 9606 Homo sapiens -0.00027098542909698153 ATYLEFIQQNEER Acetyl (Protein N-term) 1681.7948 0.79476484 1375 B4DRA5;B4DJW8;A0A2R8YFH5;Q15437;Q5QPE2;A0A2R8Y633;A0A2R8Y7S7;A0A2R8YF30 SEC23B Protein transport protein Sec23B yes no 1 0 0 2 0 1 64.507 64.515 2 5.651E-47 20591 20230619_1881_Aki_TMTPro18x_K_F2 242.59 217.45 8172.8 4886.9 6707 7730.9 7167.6 8178.4 6252.2 7083.1 7329.6 9183.6 7984.2 8898.2 8200.5 6369.3 7855.8 8099.6 7779.6 9180.1 7533.3 4502.5 6946.6 7573.8 7392.2 8207.3 6396.4 7366.5 7445.8 9155 8177.2 8951.8 8341.1 6750.4 7992.1 8171.1 7453.9 8702.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57938000 2674 1375 2545 4910 4051 4051 1 9606 Homo sapiens -0.018860755324567435 AVAAAAAAAVTPAAIAAATTTLAQEEPVAAPEPK Unmodified 3113.6608 0.66084412 1107 A0A994J4Y3;A0A0S2Z4W1;A9Z1X7;A0A994J7H1;B7Z7U0;A0A994J7V4;A0A0S2Z4Z6;Q8IYB3-2;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 0 0 0 1.5 0.5 1 1 65.174 65.178 4 3.2622E-17 20883 20230619_1881_Aki_TMTPro18x_K_F2 145.19 132.7 9464.9 7625.9 8819.7 10363 7610.2 11695 8007 6604.2 8917.4 12935 11820 10553 12652 12482 12496 12737 11166 13329 8746.1 7004.1 9006.4 10249 8040.4 11600 8082.7 7274.5 9169.2 12664 12021 10886 12886 12822 12639 12830 10712 12646 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69718000 2675 1107 2546 4911;4912 4052;4053 4053 2 9606 Homo sapiens 0.18856013430422536 AVAAASLVPVVESLVYLQTQK Unmodified 2185.2358 0.23582018 3229 Q2M1V9;O14981;Q05C17 BTAF1 TATA-binding protein-associated factor 172 yes no 0 0 0 5 0 1 67.299 67.341 4 0.016064 21109 20230619_1885_Aki_TMTPro18x_K_F5 53.554 38.048 2266.4 1475.9 1852 2151.4 2045.1 1813.8 2186.2 1975.1 2967.8 2530.6 2087 2810.8 3585.6 2076 3085.5 1892.9 2061.2 3316.2 2089.9 1357.8 1919.9 2112.1 2111.6 1864.3 2218.9 2022.9 2945.7 2536.8 2253.6 2810.3 3580.1 2163.1 3083.3 1988.4 1990.8 3130.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3966500 2676 3229 2547 4913 4054 4054 1 9606 Homo sapiens 0.19061170331679023 AVAALLTIPEAEK Unmodified 1324.7602 0.76021723 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3;B3KM30 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 7 0 1 62.519 62.555 2 1.795E-08 18943 20230619_1887_Aki_TMTPro18x_K_F7 168.74 131.26 105550 94160 103470 101770 85977 96263 107150 97800 106550 133810 129480 99055 113380 87126 123090 104770 95309 95180 97640 86255 105010 102140 91246 97846 106840 100790 109600 132190 130890 101760 116560 91268 123360 104540 91459 90505 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 423330000 2677 2126 2548 4914 4055 4055 1 9606 Homo sapiens 0.11082753117375432 AVAAPRPDR Unmodified 951.52501 0.52501276 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;A0A8I5QJA6;E9PLT0;E9PNG3;Q9UG93;Q8WU01;Q9UG12 CSDE1;DKFZp586J0620;DKFZp566C233 Cold shock domain-containing protein E1 yes no 0 0 1 6.17 1.34 1 1 1 2 1 28.844 28.913 3 1.7345E-05 5453 20230619_1886_Aki_TMTPro18x_K_F6 138.26 108.79 209880 125150 202250 230160 240270 282450 234440 252180 334630 202700 228590 216840 222090 174000 192060 152120 252820 172110 193690 115550 206850 224270 246740 280700 239760 258350 330550 208210 239090 217980 225450 179830 198910 154520 240750 163560 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 142990000 2678 88 2549 4915;4916;4917;4918;4919;4920 4056;4057;4058;4059 4056 4 9606 Homo sapiens 0.047311252231338585 AVACDCLLQEHFYLR Unmodified 1893.8866 0.88657351 4001 Q9BUN6;Q53H77;Q53GN7;Q9NP92 MRPS30 28S ribosomal protein S30, mitochondrial yes no 0 0 0 7 0 1 55.549 55.61 3 3.4591E-42 16002 20230619_1887_Aki_TMTPro18x_K_F7 225.09 204.42 45976 38267 45709 56143 50908 54161 58831 50487 61210 55733 53979 54100 62054 53696 51011 70234 61222 56743 42516 35173 46602 55167 52652 54825 58904 52013 61939 56019 56075 55014 62572 56253 52735 69505 58447 54054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66571000 2679 4001 2550 4921 4060 4060 1 9606 Homo sapiens -0.02461431711321893 AVACSGAAQVR Unmodified 1088.5397 0.53967654 108 B7Z6F7;A0A024R0R6;Q92797;A0A087WUE9;Q4LE61;M0R3C7;Q92797-2 SYMPK;SYMPK variant protein Symplekin yes no 0 0 0 7 0 1 33.074 33.161 2 0.0060304 6583 20230619_1887_Aki_TMTPro18x_K_F7 83.998 62.698 14797 7470.2 18970 16681 26938 30252 21247 24161 19772 9520.5 16044 12390 12217 12189 19412 6234.2 17260 11590 13682 6925.4 19030 16249 27184 29394 21717 24694 20040 10513 16462 12458 12943 12264 19417 6706.5 16495 10972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10856000 2680 108 2551 4922 4061 4061 1 9606 Homo sapiens -0.0010517069104025722 AVADAIR Unmodified 714.40244 0.40243801 3622 P50991;A8K3C3;P50991-2 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 4 0.816 1 1 1 37.511 37.575 2 0.0074767 8565 20230619_1883_Aki_TMTPro18x_K_F4 124.89 55.455 812680 454650 890740 922610 1087800 1143000 913750 988470 1159300 489270 715530 584080 588250 483400 806760 357910 848380 454780 750580 420550 901330 895220 1109400 1134700 939090 1007100 1147000 525400 748970 585800 614970 495480 816100 368720 808600 432370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 774200000 2681 3622 2552 4923;4924;4925 4062 4062 1 9606 Homo sapiens 0.033812884917210795 AVADLALIPDVDIDSDGVFK Acetyl (Protein N-term) 2114.0783 0.078316486 4588 V9HWC4;Q9NRX4;Q9NRX4-2;Q9P019 HEL-S-132P;PHPT1 14 kDa phosphohistidine phosphatase yes no 1 0 0 5.5 0.5 1 1 68.561 68.604 3 7.1198E-05 21584 20230619_1885_Aki_TMTPro18x_K_F5 47.752 39.855 4997.6 5389.4 5007.9 6470.6 6513.6 6013.8 6436.7 5661.4 5189.8 6144.4 9347 5683.7 6453.3 5886.2 8472.2 6831.9 6540.7 6535.2 4630.4 4938.9 5116.8 6438.1 6630.5 6112.4 6457.5 5825.4 5519.5 6168.6 9246.9 5814.3 6771.5 6113.7 8464.5 6839.6 6276.7 6210.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14861000 2682 4588 2553 4926;4927 4063 4063 1 9606 Homo sapiens 0.0658404600162612 AVAEQIPLLVQGVR Unmodified 1491.8773 0.87731267 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 2 0 1 61.399 61.409 3 0.0053285 19207 20230619_1881_Aki_TMTPro18x_K_F2 70.622 53.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2683 1292 2554 4928 4064 4064 1 9606 Homo sapiens 0.1510491105696019 AVAFSPVTELK Unmodified 1160.6441 0.64412484 3469 P17858;P17858-2;Q7L2M7;Q9BSP4;B3KNQ7 PFKL ATP-dependent 6-phosphofructokinase, liver type yes no 0 0 0 8 0 1 57.974 58.021 2 0.033457 16984 20230619_1888_Aki_TMTPro18x_K_F8 78.098 37.746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2684 3469 2555 4929 4065 4065 1 9606 Homo sapiens 0.07022854337310491 AVAFSPVTELKK Unmodified 1288.7391 0.73908786 3469 P17858;P17858-2;Q7L2M7;Q9BSP4;B3KNQ7 PFKL ATP-dependent 6-phosphofructokinase, liver type yes no 0 0 1 3 0 1 53.763 53.815 3 0.00015114 15859 20230619_1882_Aki_TMTPro18x_K_F3 107.12 82.072 195160 171960 200040 197710 185420 198390 188570 178090 197420 223120 231670 222910 227850 186160 241860 228660 214940 219160 180580 157620 202530 197620 193760 200180 190340 184620 202120 223030 235920 225060 233210 195520 244140 228630 205940 208240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126610000 2685 3469 2556 4930 4066 4066 1 9606 Homo sapiens 0.10626787808473637 AVAGDASESALLK Unmodified 1230.6456 0.6455814 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 4 0 1 50.195 50.23 3 7.5958E-05 14109 20230619_1883_Aki_TMTPro18x_K_F4 106.49 64.397 76474 56239 74917 75285 95541 118720 105990 90351 118660 94876 112860 119220 109590 95003 126810 123590 105060 142490 70657 51664 76584 74999 97995 116050 106580 94405 119840 96454 116020 119140 112760 100310 127450 124790 100990 135000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76392000 2686 3387 2557 4931 4067 4067 1 9606 Homo sapiens 0.03948443635431431 AVAGEFSEPVTLETPAFMFR Unmodified 2198.0718 0.07179132 4434 Q9BTV5;M0R366 FSD1 Fibronectin type III and SPRY domain-containing protein 1 yes no 0 0 0 6.5 0.5 1 1 64.131 64.169 3 1.9927E-22 19725 20230619_1887_Aki_TMTPro18x_K_F7 178.51 166.31 44016 35355 38503 47190 40008 44445 45525 44914 43706 36285 33397 44722 44791 37489 43686 43701 44356 45708 40653 32467 39647 46632 41587 45154 45524 45646 44220 37393 35347 44748 45302 39236 44478 43932 42442 43387 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88119000 2687 4434 2558 4932;4933 4068 4068 1 9606 Homo sapiens 0.02067829569296009 AVAGNISDPGLQK Unmodified 1268.6725 0.67246486 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9;B4DKC9 VCL;HEL114 Vinculin yes no 0 0 0 6.5 0.5 1 1 47.678 47.763 3 5.2006E-06 12555 20230619_1887_Aki_TMTPro18x_K_F7 125.28 89.773 334710 278190 345100 416700 445840 466900 479620 459160 578390 437760 461960 475850 537900 428860 431750 547640 526240 526110 309610 255760 351710 409840 455890 468030 484410 469110 578650 445030 482790 479980 541480 450290 446750 546870 502590 499930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 310270000 2688 51 2559 4934;4935 4069;4070 4070 2 9606 Homo sapiens 0.04887552246600535 AVAGWEEVLR Unmodified 1128.5928 0.59275797 3081 H7BXY3;Q7L2E3-3;Q7L2E3;Q7L2E3-2 DHX30 Putative ATP-dependent RNA helicase DHX30 yes no 0 0 0 6 0 1 57.575 57.644 2 0.068241 17144 20230619_1886_Aki_TMTPro18x_K_F6 76.1 50.928 65121 54364 70975 73532 67819 77156 74814 77458 76850 95330 101610 104200 110900 92771 98812 99457 106220 125540 60268 49922 71582 72727 70870 77738 75144 79585 79246 95614 103510 104970 112290 96479 101110 101290 101700 118890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58695000 2689 3081 2560 4936 4071 4071 1 9606 Homo sapiens 0.03360530363283942 AVAHHTDCTFIR Unmodified 1426.6776 0.67756701 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8;Q59GS3;J3QSA9;J3KRP2;J3QQM1;J3QRR3;J3QLH6;J3QRW1 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 6.5 0.5 1 1 32.09 32.154 3 8.3762E-07 6187 20230619_1887_Aki_TMTPro18x_K_F7 130.56 107.84 16836 14287 17563 19683 16478 19589 16004 17339 16975 17802 18786 15827 17838 17624 15771 15961 20842 19661 15577 13122 17776 19425 17198 19757 16210 17883 17318 17909 19126 16224 18158 18032 16353 16275 19884 18639 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22937000 2690 1202 2561 4937;4938 4072;4073 4073 2 9606 Homo sapiens -0.018704671624391267 AVAILCNHQR Unmodified 1180.6135 0.61351019 2724 P11387;B9EG90;A0A7P0T852;Q9BVT2 TOP1 DNA topoisomerase 1 yes no 0 0 0 3 0 1 38.233 38.286 3 6.2769E-10 8919 20230619_1882_Aki_TMTPro18x_K_F3 178.94 142.55 32540 29801 30284 32600 38187 45689 34490 36595 50990 27516 31225 30929 29980 25227 29859 28116 33770 30099 30094 27299 31087 32865 39007 44994 35488 37761 50148 28453 32909 31059 30644 26365 30569 28328 32247 28581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124390000 2691 2724 2562 4939 4074 4074 1 9606 Homo sapiens 0.030427974712893047 AVALYFEDK Unmodified 1054.5335 0.53351176 89 H0Y612;A0A024R0F6;Q9UPN9-2;Q9UPN9;B4DXI9;B3KN30 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 0 0 0 6 0 1 58.738 58.803 3 0.0021697 17616 20230619_1886_Aki_TMTPro18x_K_F6 89.355 71.623 25916 24289 25402 27862 19911 28339 26785 26027 29679 32257 27597 26568 31851 25530 28290 30421 30539 30678 23981 22258 25787 27854 21353 28559 26703 26919 30012 32093 28593 27190 32194 26644 28965 30501 29199 29135 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19072000 2692 89 2563 4940 4075 4075 1 9606 Homo sapiens 0.008426343491009902 AVAMVAR Unmodified 716.40033 0.40032952 1565 A0A590UJB6 yes yes 0 0 0 1.5 0.5 1 1 41.562 41.601 2 0.075191 10502 20230619_1881_Aki_TMTPro18x_K_F2 74.849 74.849 599260 483700 503150 544750 654240 686890 670240 646290 733190 564750 582830 505550 618260 499650 630970 612870 690530 498550 553340 443420 521650 547100 667990 683040 676530 660780 737010 573710 606280 516240 630450 521590 644480 607820 658790 475440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2295600000 2693 1565 2564 4941;4942 4076 4076 1 9606 Homo sapiens 0.030785364822463634 AVANESGLNFISVK Unmodified 1447.7671 0.76709352 2529 B4DLM8;O15381-5;O15381;B4DQJ4;O15381-3;O15381-4;O15381-2 NVL Nuclear valosin-containing protein-like yes no 0 0 0 1 0 1 58.698 58.698 3 0.00057857 17976 20230619_1880_Aki_TMTPro18x_K_F1 88.122 69.29 42181 39839 48951 50565 59030 75723 56065 56389 70589 54413 56640 54903 60149 51400 51051 61268 56104 63037 39093 36544 49340 50492 60525 74181 57143 58873 70501 55170 58901 55620 60855 53663 52411 61479 53679 59829 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115900000 2694 2529 2565 4943 4077 4077 1 9606 Homo sapiens 0.061120659979224 AVANQTSATFLR Unmodified 1277.6728 0.67279921 3706 Q53XL8;Q53HB3;P62191;P62191-2 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 1.5 0.5 1 1 45.538 45.578 2 1.1007000000000001E-24 12372 20230619_1881_Aki_TMTPro18x_K_F2 265.77 243.19 293150 241750 239210 279080 289660 359150 307020 313020 398670 206820 190870 150620 177800 132940 246440 200450 209720 141310 270660 221650 248550 279790 297950 355930 311180 320060 392090 213410 204920 155130 185100 141330 247080 197210 200540 135090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 300020000 2695 3706 2566 4944;4945 4078 4078 1 9606 Homo sapiens 0.04506971966452511 AVANTMR Unmodified 761.38541 0.38540773 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DX08;H0Y914 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 7 0.816 1 1 1 31.723 31.769 2 0.0085426 5998 20230619_1887_Aki_TMTPro18x_K_F7 120.52 77.475 79657 39705 102080 91015 139990 166540 101360 127900 122420 30780 44190 34918 32675 30218 80095 21921 54782 29385 73648 36830 102340 88577 141450 161600 105140 130600 120130 36614 48554 35200 36005 30886 78877 22776 52484 27924 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51549000 2696 2633 2568 4946;4947;4948 4079 4079 1 9606 Homo sapiens -0.004829553857462088 AVANYDSVEEGEK Unmodified 1409.6311 0.63105355 1097 P51659;A0A0S2Z4J1;B2R659;E7EPL9;A0A804HK65;A0A2R8YD50;P51659-2;P51659-3;B4DSD0;B4DDM5;A0A804HKU2;E7ER27;A0A2R8YF45;A0A2R8YDT8;A0A804HKB5;A0A804HK88 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 0 0 0 1.8 0.748 2 2 1 45.214 45.262 2;3 2.201E-07 12251 20230619_1881_Aki_TMTPro18x_K_F2 178.81 150.09 127970 90576 132870 141690 162160 176280 160210 165280 167980 157110 196240 191220 170500 166000 187560 163060 195690 179270 118270 83373 135070 139260 166010 175300 161940 169370 171740 160260 198910 191740 175770 171810 190730 164930 187040 170160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 475900000 2697 1097 2569 4949;4950;4951;4952;4953 4080;4081 4081 2 9606 Homo sapiens -0.057376733034061544 AVAPPTPASK Unmodified 937.52328 0.52328142 3901 Q14781 CBX2 Chromobox protein homolog 2 yes yes 0 0 0 8 0 1 41.563 41.56 2 0.0014145 10135 20230619_1888_Aki_TMTPro18x_K_F8 107.57 61.149 11149 6427.6 10774 11498 13831 14865 9393 8538.8 11779 12518 14306 12724 10728 12589 10774 6262 13824 13764 10287 5933.1 11022 11224 14008 14626 9807.7 9272 11971 12453 14390 12888 11089 12654 11098 6831.6 13197 12994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7428200 2698 3901 2570 4954 4082 4082 1 9606 Homo sapiens 0.0520207141452147 AVAQALEVIPR Unmodified 1165.6819 0.68190733 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 4.5 3.5 1 1 57.401 57.427 2;3 2.8649E-09 17370 20230619_1880_Aki_TMTPro18x_K_F1 183.33 151.9 171490 150230 159100 174930 147470 168870 167860 170000 192840 205040 205100 197760 214220 171550 192650 216460 207220 205020 158540 137720 162570 174590 154740 171280 168900 174550 195620 205090 210200 200230 217250 180240 197220 216100 198110 194860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1344400000 2699 2435 2571 4955;4956 4083;4084 4083 2 9606 Homo sapiens 0.10569365322771773 AVASAAAALVLK Unmodified 1083.6652 0.66519463 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 4.5 0.5 1 1 61.596 61.621 3 0.00014233 18987 20230619_1883_Aki_TMTPro18x_K_F4 108.7 68.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2700 1292 2572 4957;4958 4085;4086 4085 2 9606 Homo sapiens 0.12670864436813645 AVASDFYLR Acetyl (Protein N-term) 1082.5397 0.53965977 5 A0A023T6R1;Q96A72;F5H6N1;F5H124 FLJ10292;MAGOHB Protein mago nashi homolog 2 yes no 1 0 0 3.5 0.5 1 1 60.395 60.411 2 6.2159E-06 18555 20230619_1882_Aki_TMTPro18x_K_F3 129.68 114.91 20084 15740 15434 15108 17987 23824 20526 20200 26403 21230 23132 19696 22674 17180 22554 21590 24731 22563 18531 14412 16109 15434 18603 23343 20722 20903 26415 21368 23845 19994 23139 18053 23050 21682 23626 21428 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 95524000 2701 5 2573 4959;4960 4087;4088 4087 2 9606 Homo sapiens 0.0016915258061089844 AVASPEATVSQTDENK Unmodified 1645.7795 0.7795087 2080 Q9Y4E1;J3KP36;Q9Y4E1-4;Q9Y4E1-1;Q9Y4E1-2;Q9Y4E1-6;Q9Y4E1-3;Q9Y4E1-5;A8K5W5;Q641Q2;Q641Q2-2;B7ZME8;A0A087WYF6;E7ESD2;F8W7U3;B4DF48;B4DHJ2;Q9NVB8;B4DPK9 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A yes no 0 0 0 2.5 0.5 1 1 43.06 43.134 3 4.4283E-11 10977 20230619_1882_Aki_TMTPro18x_K_F3 153 131.01 24118 14766 20443 22843 26648 25736 25642 30493 29301 26489 34766 30836 31750 32427 28524 34439 32437 32384 22238 13599 21176 22438 27144 25909 26040 30697 29842 27119 35250 31198 32383 33471 29312 34449 30998 30780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63001000 2702 2080 2574 4961;4962 4089 4089 1 9606 Homo sapiens -0.0175498712035278 AVATEANNSTFFSVSSSDLMSK Oxidation (M) 2308.0529 0.052906371 422 I3L4J1;A0A024R705;Q9UN37;Q9UF30 VPS4A;DKFZp434E0418 Vacuolar protein sorting-associated protein 4A yes no 0 1 0 7 0 1 59.011 59.06 3 1.3552E-08 17426 20230619_1887_Aki_TMTPro18x_K_F7 111.4 97.947 10799 11560 11129 15012 11216 12443 14260 11157 13780 13943 14674 14801 14824 12054 15279 17085 14343 13695 10007 10602 11305 14835 11719 12750 14180 11580 14102 13969 15026 14898 15141 12787 15487 16895 13728 13046 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12599000 2703 422 2575 4963 4090 4090 265 1 9606 Homo sapiens -0.048797965830544854 AVATWHANTER Unmodified 1254.6105 0.6105333 1872 A0A994J4Z7;P51531-2;P51531;B4DK35;A0A994J501;A0A0U1RQZ9;F6VDE0;A0A994HRU5 SMARCA2 Probable global transcription activator SNF2L2 yes no 0 0 0 6 0 1 34.749 34.795 3 0.052442 7540 20230619_1886_Aki_TMTPro18x_K_F6 41.48 0 41423 26155 36776 31738 43706 47111 44531 48508 62264 47124 60899 69914 65189 58690 64116 61264 69574 74151 38213 24019 37820 31816 44905 46502 45402 49396 62309 48419 62799 69548 66372 61032 65501 62259 66547 70276 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30631000 2704 1872 2576 4964 4091 4091 1 9606 Homo sapiens -0.00658754381856852 AVATYHANTER Unmodified 1231.5945 0.59454889 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A994J4Z2;A0A2R8Y4C5;A0A2R8Y7F3;Q59FZ6;A0A2R8YGP5;A5D6X0 SMARCA4 Transcription activator BRG1 yes no 0 0 0 5 0.816 1 1 1 29.59 29.649 3 1.5072E-17 5559 20230619_1885_Aki_TMTPro18x_K_F5 218.55 195.83 44502 24802 43564 45279 57706 58273 51611 47946 70555 53629 57704 54589 54856 49622 49817 46538 64094 53953 41060 22904 44547 44172 58649 57684 52953 49852 70249 53979 59653 55191 55877 51188 51509 47251 61116 51204 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 268140000 2705 1348 2577 4965;4966;4967 4092;4093 4093 2 9606 Homo sapiens -0.011984606187979807 AVAVAMAGALIGSEPGPAEELAK Acetyl (Protein N-term) 2193.1351 0.13511986 2093 K7END7;F5H658;B7Z8F4;Q86YB2;Q86X36;A8K6J9;Q14562;K7EQH7;Q05CV4 DHX8 ATP-dependent RNA helicase DHX8 yes no 1 0 0 5.33 0.471 2 1 68.637 68.68 2;3 4.3498E-13 21595 20230619_1885_Aki_TMTPro18x_K_F5 54.672 47.944 10429 8157.5 11548 7096.3 6720 11263 11443 10294 9365.4 10290 10258 8232.8 12451 9573.9 11121 12441 8957.1 10196 9648.9 7463.5 11545 7325.5 7508.4 11046 11205 10579 9697.3 10337 10568 8511.4 12563 9986.9 11221 12327 8599.6 9703.3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33301000 2706 2093 2578 4968;4969;4970 4094;4095 4094 2 9606 Homo sapiens 0.08627770286602754 AVAVDLGNR Unmodified 913.49813 0.49812931 4270 Q8TCS8;F8WBI3;H7BXF6 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes no 0 0 0 6 0 1 42.661 42.754 2 1.4862E-07 10662 20230619_1886_Aki_TMTPro18x_K_F6 155.75 110.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2707 4270 2579 4971 4096 4096 1 9606 Homo sapiens 0.03792016611942017 AVAVDSTGTYMATSGLDHQLK Unmodified 2164.047 0.047033132 2133 B0UZZ8;A8K9A1;O15213;B4DP15;A0A1U9X8W1;A0A1U9X8U7;A0A1U9X8U3;B4DNI0;A8K806;H0Y6G3;A0A140T9L0;A0A0G2JJL1 C6orf11;WDR46 WD repeat-containing protein 46 yes no 0 0 0 7 0 1 53.302 53.37 3 7.6359E-10 15074 20230619_1887_Aki_TMTPro18x_K_F7 121.74 112.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2708 2133 2580 4972 4097 4097 1 9606 Homo sapiens 0.01157149695973203 AVAVGRPSNEELR Acetyl (Protein N-term) 1438.7528 0.75284044 1492 D6RGI3;A0A384P5S0;D6RER5;Q9NVA2 SEPT11 Septin-11 yes no 1 0 1 2 0 1 38.138 38.202 2 1.5482E-10 8961 20230619_1881_Aki_TMTPro18x_K_F2 94.087 44.048 6325.7 6477.9 6060.4 7202.7 7654.5 5660.8 8394.3 8767 9698.1 9370.2 9804.4 7347.8 10434 8153.8 8793.9 9032.2 9786.9 10914 5856.4 5932.9 6207.1 7199.1 7823.1 5922.4 8460 8755.3 9810.8 9374.9 10064 7587.7 10546 8440.9 9027.3 9166.5 9362.3 10342 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 742290000 2709 1492 2581 4973 4098 4098 1 9606 Homo sapiens 0.05101413569673241 AVAVVVDPIQSVK Unmodified 1323.7762 0.77620165 1251 A0A140VKF2;O00487;Q4ZG77 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes no 0 0 0 1 0 1 58.903 58.903 3 0.0012236 18042 20230619_1880_Aki_TMTPro18x_K_F1 90.793 76.586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2710 1251 2582 4974 4099 4099 1 9606 Homo sapiens 0.12726459354257713 AVCEADQSHGGPR Unmodified 1382.5997 0.59971062 681 A0A024RBK4;O14545;F8VNX8 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes no 0 0 0 2 0 1 27.582 27.659 3 6.7912E-09 4825 20230619_1881_Aki_TMTPro18x_K_F2 168.31 152.92 2964.9 2472.5 3868.3 5001.7 4833.3 4994 3746.5 5116.8 5751.1 4118.2 7387.7 4355.9 4334 4024.4 4534 3245.4 5990.3 4587.7 2748.8 2282.9 3874.6 4837.1 4913.8 5049.4 3908 5189.4 5797.2 4225.4 7346 4410.7 4531.9 4121.9 4679.7 3353.8 5707.7 4348.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9901900 2711 681 2583 4975 4100 4100 1 9606 Homo sapiens -0.07628524818460392 AVCLEFSPK Unmodified 1049.5216 0.52156686 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;C9IZE1;H7C5Q3 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 8 0 1 54.465 54.532 2 0.00010386 15501 20230619_1888_Aki_TMTPro18x_K_F8 155 102.59 157220 135660 140490 154100 142700 162280 166960 166830 167720 203870 186730 179920 209450 171780 170120 237760 218740 218110 145300 124340 144240 154260 148740 163610 167000 171090 171800 203250 191620 183550 211180 180990 176740 236550 208820 207370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 342140000 2712 4468 2584 4976 4101 4101 1 9606 Homo sapiens -0.0012130566574342083 AVCMLSNTTAIAEAWAR Oxidation (M) 1879.8921 0.89205282 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;B4DN58;Q15670;P68366-2;P68366;Q71U36;Q71U36-2;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;P0DPH7-2;C9J2C0;Q9NY65-2;Q9NY65;Q6PEY2;Q7Z3M3;A0A7P0T945;V9GZ17 TUBA1B;TUBA4A;TUBA1A;TUBA2;TUBA8;TUBA3E;DKFZp686L04275 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain no no 0 1 0 2 0.816 1 1 1 61.095 61.109 3 4.7679E-19 18749 20230619_1880_Aki_TMTPro18x_K_F1 189.33 167.78 109210 92616 104430 113170 104950 111240 111320 113440 120270 113310 107630 108590 116070 96822 121020 120030 118720 132390 100970 84954 106530 112590 109110 112710 112180 115740 121540 114380 111440 110060 118420 101530 122850 120940 113710 125560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 821280000 2713 2408;3747;4144 2585 4977;4978;4979 4102;4103 4102 1484 2 9606 Homo sapiens -0.0126975291952931 AVCMLSNTTAIAEAWAR Unmodified 1863.8971 0.89713819 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;B4DN58;Q15670;P68366-2;P68366;Q71U36;Q71U36-2;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;P0DPH7-2;C9J2C0;Q9NY65-2;Q9NY65;Q6PEY2;Q7Z3M3;A0A7P0T945;V9GZ17 TUBA1B;TUBA4A;TUBA1A;TUBA2;TUBA8;TUBA3E;DKFZp686L04275 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain no no 0 0 0 3.12 0.599 1 13 1 1 69.202 69.275 3 2.3468E-38 19852 20230619_1882_Aki_TMTPro18x_K_F3 253.79 225.17 653360 555720 679930 593260 472830 604300 603620 602070 631780 760010 683970 733610 769420 701880 683060 831650 828700 829150 604440 509070 684550 596560 511380 610140 602410 619130 644520 758480 703220 744520 778900 731630 704810 832980 791480 787530 10 11 10 11 11 13 13 12 11 13 12 11 14 11 11 11 12 11 12427000000 2714 2408;3747;4144 2585 4980;4981;4982;4983;4984;4985;4986;4987;4988;4989;4990;4991;4992;4993;4994;4995 4104;4105;4106;4107;4108;4109;4110;4111;4112;4113;4114;4115;4116;4117;4118;4119;4120;4121;4122;4123 4105 20 9606 Homo sapiens -0.00025449056897741684 AVDALLTHCK Unmodified 1126.5805 0.58047873 3325 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L1A3 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 0 8 0 1 48.808 48.874 2 9.6018E-07 13041 20230619_1888_Aki_TMTPro18x_K_F8 157.96 131.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2715 3325 2586 4996 4124 4124 1 9606 Homo sapiens 0.022251706285715045 AVDDGVNTFK Unmodified 1064.5138 0.51383895 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 4 0.816 1 1 1 48.01 48.075 2 1.7097E-13 13053 20230619_1883_Aki_TMTPro18x_K_F4 223.36 171.51 809160 613540 671550 701420 808840 847630 767880 750280 942990 870360 984520 956260 1086500 866660 885340 1145200 1088800 1003900 746810 562660 695760 703180 828460 844090 782060 776440 952370 876120 1012200 964510 1095800 911630 916450 1137700 1039200 955310 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1975099999.9999998 2716 3621 2587 4997;4998;4999 4125;4126;4127 4126 3 9606 Homo sapiens -0.015837416616705013 AVDFAER Unmodified 806.39227 0.39226725 3734 P62917;E9PKZ0;G3V1A1;B4DVG7;E9PKU4;E9PP36 RPL8 60S ribosomal protein L8 yes no 0 0 0 3 0.816 1 1 1 41.105 41.165 2 0.0035366 10112 20230619_1882_Aki_TMTPro18x_K_F3 154.35 89.574 1897900 1507000 1608800 1803900 2051600 2230000 1965400 2077300 2501500 1912500 2135100 2121300 2329600 1918600 1797300 2443900 2676700 2370700 1752400 1382400 1666100 1802800 2095000 2219300 2003000 2127800 2501900 1949300 2215500 2138600 2346900 2013600 1888900 2441400 2550400 2253600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2323300000 2717 3734 2588 5000;5001;5002 4128;4129 4129 2 9606 Homo sapiens -0.018673192335313615 AVDIPHMDIEALK Unmodified 1450.749 0.74900062 3732 P62906;Q1JQ76 RPL10A 60S ribosomal protein L10a;Ribosomal protein yes no 0 0 0 5.25 1.48 1 1 1 1 59.042 59.098 3 1.4342E-15 17552 20230619_1885_Aki_TMTPro18x_K_F5 163.27 121.73 136320 116350 132490 141800 111860 170430 151570 139870 168340 184530 168450 177440 193670 167510 158230 224310 205430 230220 126060 106720 134730 141470 119280 169350 151030 146220 170670 183910 173970 180150 195260 176140 164510 224600 196270 218510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1107800000 2718 3732 2589 5003;5004;5005;5006 4130;4131 4131 2 9606 Homo sapiens 0.04165607751610878 AVDIPHMDIEALK Oxidation (M) 1466.7439 0.74391524 3732 P62906;Q1JQ76 RPL10A 60S ribosomal protein L10a;Ribosomal protein yes no 0 1 0 4.5 0.5 1 1 52.024 52.072 3 4.3838E-06 14669 20230619_1885_Aki_TMTPro18x_K_F5 123.28 101.97 292360 267620 269560 325430 333460 325410 324340 332770 356280 356840 394960 384530 392210 328010 343120 441160 378900 440840 270370 245400 276970 323870 340780 329380 328600 340130 362750 360130 403180 387420 398010 346210 352330 441170 362610 418490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 859510000 2719 3732 2589 5007;5008 4132;4133 4133 2409 2 9606 Homo sapiens 0.029213038889793097 AVDIPHMDIEALKK Oxidation (M) 1594.8389 0.83887826 3732 P62906;Q1JQ76 RPL10A 60S ribosomal protein L10a;Ribosomal protein yes no 0 1 1 7 0.816 1 1 1 49.951 50.029 4 1.8968E-06 13589 20230619_1887_Aki_TMTPro18x_K_F7 126.48 106.1 1286300 1122400 1070200 1320100 1445200 1439600 1388400 1335200 1352500 1432100 1640800 1295300 1347600 1149200 1450200 1543100 1213400 1315500 1188200 1029000 1112100 1318300 1468900 1444900 1402100 1374000 1391600 1437800 1655000 1317900 1389000 1210900 1460500 1531500 1164000 1251600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 981810000 2720 3732 2590 5009;5010;5011 4134 4134 2409 1 9606 Homo sapiens 0.06525237360165193 AVDITTPK Unmodified 843.47018 0.47018322 3306 O75475;Q05CM9;O75475-3;O75475-2 PSIP1 PC4 and SFRS1-interacting protein yes no 0 0 0 6.5 0.5 1 1 45.322 45.408 2 0.0012494 11837 20230619_1886_Aki_TMTPro18x_K_F6 145.63 75.366 455160 325430 423180 475330 478060 520240 461770 442260 563520 495510 584020 593180 602530 528010 539000 449380 687420 615560 420300 299290 433640 468030 491960 520760 469720 458830 568930 501150 599070 595240 611560 542800 556830 462530 655780 583160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 439940000 2721 3306 2591 5012;5013 4135;4136 4135 2 9606 Homo sapiens 0.042186936318557855 AVDLLYAMCDR Unmodified 1325.6108 0.61079258 1042 O94973-2;O94973;B7Z5S9;A0A0G2JS82;B7Z1Q4;O94973-3;A0A8I5KPP9;A0A0G2JQM1;A0A8I5KYZ9 AP2A2 AP-2 complex subunit alpha-2 yes no 0 0 0 7 0 1 62.249 62.284 2 0.012372 18827 20230619_1887_Aki_TMTPro18x_K_F7 79.659 61.927 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2722 1042 2592 5014 4137 4137 1 9606 Homo sapiens -0.03898838768554924 AVDLVEEESGAPGEEQR Unmodified 1813.833 0.83300084 3272 Q5SQH4;O60231;A0A1U9X7L7;A0A1U9X7L6;B4DZ28;A0A140T947;A2AB15 DBP2;DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 0 0 0 1 0 1 49.872 49.872 3 1.054E-18 14300 20230619_1880_Aki_TMTPro18x_K_F1 185.86 173.23 26493 17918 21590 24708 23776 25682 23287 28043 27944 29171 33032 32404 31916 25512 27192 33476 33711 32751 24433 16472 22387 24403 24526 25945 23673 28502 28412 29505 33591 32526 32377 26968 28129 33453 32185 31118 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32747000 2723 3272 2593 5015 4138 4138 1 9606 Homo sapiens -0.041362344084518554 AVDNQVYVATASPAR Unmodified 1560.7896 0.78961988 4576 V9HW91;Q9NQR4 HEL-S-8a;NIT2 Omega-amidase NIT2 yes no 0 0 0 5.5 0.5 1 1 43.798 43.89 2 1.6277E-13 11173 20230619_1886_Aki_TMTPro18x_K_F6 194.98 147.13 33387 21863 31781 30361 34243 40575 34002 30757 38320 26579 32120 35539 30057 30269 33885 35634 36631 34902 30822 20103 32448 30087 35397 40012 34427 32002 38504 27390 33192 35501 30965 31648 34550 35681 35009 33165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63134000 2724 4576 2594 5016;5017 4139;4140 4140 2 9606 Homo sapiens 0.03165665395567885 AVDNQVYVATASPARDDK Unmodified 1918.9385 0.93846896 4576 V9HW91;Q9NQR4 HEL-S-8a;NIT2 Omega-amidase NIT2 yes no 0 0 1 5 0 1 43.571 43.652 3 4.3278E-15 11060 20230619_1885_Aki_TMTPro18x_K_F5 169.43 146.95 97481 96808 94209 98798 118850 105300 102920 118100 95313 120620 127700 116520 133130 105790 118930 165260 157430 159700 90233 88606 96329 99775 120840 106410 104560 119770 98971 121550 129670 118280 135010 112660 123570 164640 150270 151730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101770000 2725 4576 2595 5018 4141 4141 1 9606 Homo sapiens 0.01575726507780928 AVDPEDDFQR Unmodified 1190.5204 0.52038089 3090 Q6IB29;H7C2Q8;Q99848;B4DHA6 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 0 0 0 1 0 1 43.805 43.805 2 2.2254E-09 11736 20230619_1880_Aki_TMTPro18x_K_F1 242.09 200.43 162430 129600 140690 155770 163680 195270 177160 173200 200800 177200 185250 185780 217840 168360 175700 221160 214550 194540 150010 118890 145200 155670 168750 193920 178540 178560 202590 179200 192200 187720 219220 177060 181790 219780 204770 185130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 340810000 2726 3090 2596 5019 4142 4142 1 9606 Homo sapiens -0.06725848500968823 AVDPTSGQLYGLAR Unmodified 1446.7467 0.74669243 4273 Q8TEM1;A0A8Q3WKI1 NUP210 Nuclear pore membrane glycoprotein 210 yes no 0 0 0 8 0 1 52.367 52.444 2 0.00050618 14588 20230619_1888_Aki_TMTPro18x_K_F8 132.17 74.582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2727 4273 2597 5020 4143 4143 1 9606 Homo sapiens 0.04118895338137918 AVDQSIEK Unmodified 888.45526 0.45526144 760 A0A1W2PPX5;A0A1W2PQR6;A0A1W2PQB7;A0A1W2PS43;A0A024RDG6;A0A1W2PRS1;Q14108;A0A1W2PPU6;Q14108-2;D6RDG0;A0A1W2PS70;A0A1W2PNX7;A0A1W2PSE4;A0A1W2PQL5 SCARB2 Lysosome membrane protein 2 yes no 0 0 0 3 0 1 41.631 41.693 2 0.036383 10348 20230619_1882_Aki_TMTPro18x_K_F3 74.376 38.496 56669 43491 70516 65155 77040 89432 72517 85155 93748 75511 97715 124880 99887 96864 95202 69252 129880 118250 52486 39997 70550 64328 79415 88443 74089 86996 94386 78347 100350 123430 101770 99363 98643 72879 123850 111830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55787000 2728 760 2598 5021 4144 4144 1 9606 Homo sapiens 0.006572017638518446 AVDSLVPIGR Unmodified 1025.5869 0.58694431 3504 V9HW26;P25705;P25705-2;P25705-3;K7EK77;B4DGW3;K7ENJ4;K7ERX7 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 7.5 0.5 1 1 52.266 52.342 2 3.4842E-09 14605 20230619_1887_Aki_TMTPro18x_K_F7 194.29 114.83 662480 555090 606030 679000 660850 741760 791950 773740 839690 838060 838880 829880 932340 756790 821790 941520 880810 931780 612240 509190 621710 676410 685730 746030 792260 789930 852910 843220 864800 840600 943090 793040 841530 942290 842540 884930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4325200000 2729 3504 2599 5022;5023 4145;4146 4145 2 9606 Homo sapiens 0.07517431851601941 AVDSQILPK Unmodified 969.5495 0.54949617 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 RPL6 60S ribosomal protein L6 yes no 0 0 0 6.8 0.748 2 2 1 49.162 49.243 2;3 2.2721E-06 13512 20230619_1886_Aki_TMTPro18x_K_F6 189.7 119.7 178350 149150 165240 179100 184660 203560 201590 193620 215400 193480 206790 192920 231600 178850 185420 244280 223230 207270 164840 136790 169340 178740 190740 203770 202680 198500 218280 195580 213530 195590 233310 188440 191760 242180 213110 197320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4264399999.9999995 2730 680 2600 5024;5025;5026;5027;5028 4147;4148;4149 4148 3 9606 Homo sapiens 0.06350340585993308 AVDTLAYLSDGDAR Unmodified 1465.7049 0.7048872 2410 B3KT25;Q96S55-2;Q96S55;Q96S55-4;Q96S55-3 WRNIP1 ATPase WRNIP1 yes no 0 0 0 3 0 1 56.83 56.866 3 4.0799E-05 17162 20230619_1882_Aki_TMTPro18x_K_F3 103.85 83.747 22290 17696 20795 20894 23135 21082 24064 22821 27726 22309 22815 21666 22016 16464 25363 26941 21313 23280 20595 16231 21280 20850 23841 21359 24318 23184 27829 22559 23606 21866 22637 17714 25519 26693 20445 22143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19618000 2731 2410 2601 5029 4150 4150 1 9606 Homo sapiens -0.009337051410511776 AVDTWSWGER Unmodified 1205.5465 0.54653606 1081 A0A0S2Z3Y1;Q08380;B4DVE1;B4DI70;B3KP88;B4DDG4;B4DWA8 LGALS3BP Galectin-3-binding protein yes no 0 0 0 4 0 1 53.581 53.601 2 0.0001813 15628 20230619_1883_Aki_TMTPro18x_K_F4 122.44 110.95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2732 1081 2602 5030 4151 4151 1 9606 Homo sapiens -0.048015345388193964 AVDVFFPPEAQNDFPVAMQISEK Unmodified 2578.2414 0.24137584 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 6 0 1 64.905 64.949 3 2.3089E-08 20309 20230619_1886_Aki_TMTPro18x_K_F6 101.75 86.153 154640 105410 133510 139700 111860 135480 141920 159270 155650 171980 160700 182750 210950 178790 135340 267130 218400 253220 142680 96854 137100 138240 118860 137820 141870 161350 158150 173400 166910 185050 210200 189210 144280 265800 208400 240520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82672000 2733 826 2603 5031 4152;4153 4152 2 9606 Homo sapiens 0.015384810611976718 AVECPPPR Unmodified 924.44874 0.44873627 3911 Q15046;Q15046-2;Q6ZTI3 KARS Lysine--tRNA ligase yes no 0 0 0 3 0.816 1 1 1 32.128 32.195 2 0.0014378 6401 20230619_1882_Aki_TMTPro18x_K_F3 142.64 137.95 41311 24656 49554 46794 64232 74361 46191 55303 60928 49829 65542 74153 65891 61571 63558 34898 76089 66606 38198 22775 49851 45750 65109 72609 48122 57635 61392 51425 67102 73659 67167 62524 65192 37382 72615 62962 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54430000 2734 3911 2604 5032;5033;5034 4154;4155 4154 2 9606 Homo sapiens -0.01651014668505013 AVEDDFVEMR Oxidation (M) 1225.5285 0.52850274 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3;Q9BTE3-3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 1 0 1 0 1 45.974 45.974 2 0.0086518 12666 20230619_1880_Aki_TMTPro18x_K_F1 75.571 64.771 76488 57902 75341 82192 87066 85787 81132 85904 86333 88472 101320 96069 102770 85243 79629 88442 109880 106550 70685 53220 76828 81034 89266 86485 82354 87817 88278 89491 103250 96826 103740 88497 83092 89817 104820 101020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41525000 2735 1140 2605 5035 4156 4156 705 1 9606 Homo sapiens -0.07524037575853981 AVEDDFVEMR Unmodified 1209.5336 0.53358811 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3;Q9BTE3-3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 0 1 0 1 51.717 51.717 2 4.0592E-06 15060 20230619_1880_Aki_TMTPro18x_K_F1 168.74 147.28 134840 107700 127360 130830 94828 138570 118170 117700 150210 176690 150560 154620 187060 151840 140780 176770 162700 161600 124610 98802 129560 130320 102040 139000 118850 123260 151420 174740 156030 157810 187510 158080 145370 176300 155450 153650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153830000 2736 1140 2605 5036 4157 4157 1 9606 Homo sapiens -0.06279733713222413 AVEDVRPPHK Unmodified 1146.6146 0.61455605 1017 E7EN19;Q53TX8;A0A0D9SEY1;B7Z388;O95819-3;O95819-6;G5E948;V9HWH3;O95819-2;B7Z3V5;O95819;O95819-5;H7C360;O95819-4;E7ENQ1;Q5MD60;E7EX83;H7C0P6 MAP4K4;HEL-S-31 Mitogen-activated protein kinase kinase kinase kinase 4 yes no 0 0 1 6.5 0.5 1 1 36.324 36.389 4 0.00084588 8074 20230619_1886_Aki_TMTPro18x_K_F6 110.38 84.996 145160 105460 129810 142370 153490 162790 145550 143870 182760 165500 202810 178520 193200 175460 152900 178770 214250 185160 134020 96895 133550 140960 157390 162630 148380 148880 184800 166590 206480 180640 195690 181220 159700 179900 204200 175900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56979000 2737 1017 2606 5037;5038 4158;4159 4159 2 9606 Homo sapiens 0.04711335111824155 AVEEAFVPVIK Unmodified 1200.6754 0.67542497 403 P51003;A0A024R6M3;B4DHB8;B4DYF4;G3XAH6;P51003-2;Q9NRJ5;A4D1Z6;A0A0C4DGK1;G3V3I9;A0ZTA0;H0YJ00 PAPOLA;PAPOLB;TPAP Poly(A) polymerase alpha;Poly(A) polymerase beta yes no 0 0 0 5.5 0.5 1 1 60.747 60.801 3 0.00082645 18419 20230619_1886_Aki_TMTPro18x_K_F6 92.538 72.926 60324 50185 59035 63027 59935 65688 66503 61540 71422 76487 74258 65601 77036 65273 74278 83012 71846 76032 55776 46049 60116 62628 62354 66134 66828 63570 72638 76173 76130 67122 78394 68285 75497 82721 68794 72274 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97359000 2738 403 2607 5039;5040 4160;4161 4161 2 9606 Homo sapiens 0.08311427371404534 AVEEGLTYK Unmodified 1008.5128 0.51277632 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9;B3KY97 RRP12 RRP12-like protein yes no 0 0 0 4 0 1 47.836 47.876 2 0.0004114 13019 20230619_1883_Aki_TMTPro18x_K_F4 108.98 44.493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2739 2355 2608 5041 4162 4162 1 9606 Homo sapiens 0.008860439694331035 AVEELQSIIK Acetyl (Protein N-term) 1170.6496 0.64960415 2500 B4DJ85;Q92990;Q92990-2 GLMN Glomulin yes no 1 0 0 3.5 0.5 1 1 64.752 64.772 2 2.8857E-05 20321 20230619_1883_Aki_TMTPro18x_K_F4 84.476 48.28 31307 29794 28519 29981 33160 38832 33529 34381 36334 38161 40543 37659 40191 36061 34951 43621 38075 48732 28957 27270 29284 30392 34111 38503 33880 35521 37039 38351 41360 38221 40792 37655 35858 43970 36473 46192 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75545000 2740 2500 2609 5042;5043 4163;4164 4164 2 9606 Homo sapiens 0.07110533129139185 AVEGCVSASQAATEDGQLLR Unmodified 2060.9797 0.97968185 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 3 0 1 50.109 50.185 3 3.2703999999999996E-36 14203 20230619_1882_Aki_TMTPro18x_K_F3 230.48 214.85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2741 1292 2610 5044 4165 4165 1 9606 Homo sapiens -0.008368805149984837 AVEHINK Unmodified 809.43955 0.43955179 293 A0A024R4F1;P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879;A4UCS8;K7ERS8;A0A2R8Y6I8;L0R6S1 ENO1;TMEM237 Alpha-enolase;Enolase yes no 0 0 0 5 0.816 1 1 1 34.531 34.593 3 0.0018525 7370 20230619_1885_Aki_TMTPro18x_K_F5 154.01 56.945 875420 291680 1383100 1273700 2372000 1938800 1405500 2147900 1179500 750940 1828500 2294900 983580 1463900 2086500 359450 1943800 1685500 810360 275890 1375800 1212800 2352100 1913800 1469200 2140300 1237600 879410 1813700 2228900 1086900 1476700 2084600 459260 1859400 1587800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2100099999.9999998 2742 293 2611 5045;5046;5047 4166;4167 4166 2 9606 Homo sapiens 0.02720960037470377 AVEHLDDLPGALSELSDLHAHK Unmodified 2366.1866 0.18663816 2774 CON__P01966 yes yes 0 0 0 6.5 1.12 1 1 1 1 58.153 58.209 5 3.6686E-23 17328 20230619_1886_Aki_TMTPro18x_K_F6 177.4 162.47 + 60781 69173 86155 78613 104980 134750 126590 135490 124250 213630 303670 492030 198020 236600 335400 212920 254540 416190 56534 63347 85713 79394 108160 131970 126440 140470 133910 219740 300010 477200 212260 250960 333570 226110 245440 392560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1054299999.9999999 2743 2774 2612 5048;5049;5050;5051 4168;4169 4168 2 9606 Homo sapiens 0.05819230304859957 AVEILADIIQNSTLGEAEIER Unmodified 2283.1958 0.19580586 2339 Q96CP5;B3KM34;O75439;G3V0E4;B4DM90;A8K1E9 PMPCB Mitochondrial-processing peptidase subunit beta yes no 0 0 0 5 0 1 67.895 67.937 3 2.5652E-16 21329 20230619_1885_Aki_TMTPro18x_K_F5 152.04 139.16 3642.8 2432.3 3657.5 4779.9 3363.6 4558.1 3634.5 3276.6 2553.9 4404.8 4572.9 3974.5 5187 3165.9 5101.6 3474.4 3975.1 4528.2 3364.6 2246.7 3717.2 4624.1 3527.9 4591.1 3618.6 3469.6 2751.6 4374.7 4621.5 4026 5258.5 3317.1 5117.9 3550.5 3818.1 4287.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4376000 2744 2339 2613 5052 4170 4170 1 9606 Homo sapiens 0.10553578870531055 AVELAANTK Unmodified 915.50255 0.50254598 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8;B4DVU1 HEL107;TKT Transketolase yes no 0 0 0 6.5 0.5 1 1 44.518 44.604 3 8.9645E-05 11511 20230619_1886_Aki_TMTPro18x_K_F6 140.11 72.274 133630 92970 160350 165830 199930 220490 165590 173540 351890 177260 213760 261410 230520 191410 210060 150590 281390 268080 123650 85736 161280 162040 203940 217610 174580 180640 341850 181940 226780 258860 233870 197750 217540 158770 268450 253430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200600000 2745 3523 2614 5053;5054 4171 4171 1 9606 Homo sapiens 0.041414810348555875 AVELGVK Unmodified 714.42759 0.42759012 3543 P33908;P33908-2 MAN1A1 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA yes no 0 0 0 6.5 0.5 1 1 46.39 46.476 2 0.0090158 11952 20230619_1887_Aki_TMTPro18x_K_F7 119.89 0 170310 125050 162780 179490 189740 201760 178340 177060 240190 186300 204840 217310 215240 192700 180170 180260 254450 237020 157320 114960 166470 177000 194710 201730 182380 182880 239650 188880 212320 218260 217830 198960 187900 184540 242620 224590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178070000 2746 3543 2615 5055;5056 4172 4172 1 9606 Homo sapiens 0.0589534329427579 AVELLGDIVQNCSLEDSQIEK Unmodified 2359.1577 0.15770579 3533 P31930;B4DUL5;B4DZB9 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 3.5 0.5 1 1 64.411 64.431 3 0.042858 20205 20230619_1883_Aki_TMTPro18x_K_F4 42.64 32.173 5543.8 3864.7 3296.3 5141.8 4573.4 5305.4 4638.1 4546.5 5752.4 5845 6010.9 6859.9 5015.5 4431.8 3565.4 4208.8 5567 6485.2 5104.3 3550.8 3566 5085.4 4661 5334 4705.6 4734 5808.2 5867.2 6113.9 6825.8 5084 4642.1 3765.3 4358.6 5313.4 6132.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21513000 2747 3533 2616 5057;5058 4173 4173 1 9606 Homo sapiens 0.03249324893522498 AVELNPK Unmodified 769.4334 0.43340378 2627 B4DZ87;O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 0 6 0.816 1 1 1 43.767 43.852 2 0.0075799 11132 20230619_1886_Aki_TMTPro18x_K_F6 129.4 63.26 184750 110760 210030 219360 273740 308020 253040 269830 275170 200220 277310 325680 259050 240410 286870 161800 316730 327060 170740 102380 212290 213540 278710 303610 257070 276390 278840 209980 284050 321720 266440 246720 292150 173540 302830 308860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184510000 2748 2627 2617 5059;5060;5061 4174 4174 1 9606 Homo sapiens 0.03946441805953782 AVENSSTAIGIR Unmodified 1216.6412 0.64116473 1225 Q6IB71;A0A140VK43;P25788-2;P25788 PSMA3 Proteasome subunit alpha type;Proteasome subunit alpha type-3 yes no 0 0 0 5.5 0.5 1 1 41.722 41.811 2 1.4284E-23 10272 20230619_1885_Aki_TMTPro18x_K_F5 247.96 208.29 208430 149540 170740 191120 225890 251220 208790 221440 706830 227180 232520 250120 286700 242440 214350 286330 291550 271750 192290 137320 177520 190330 231030 248760 226300 228350 671340 231250 263050 252670 287780 252630 223880 286020 278070 258330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 418240000 2749 1225 2618 5062;5063 4175;4176 4175 2 9606 Homo sapiens 0.04150979212499806 AVENYLIQMAR Unmodified 1306.6704 0.67035637 3221 O14737;O14737-2;K7EQA1;Q59GR9 PDCD5 Programmed cell death protein 5 yes no 0 0 0 1 0 1 61.188 61.188 2 1.5272E-08 18935 20230619_1880_Aki_TMTPro18x_K_F1 177.78 148.82 105580 85787 97012 113930 82437 107880 105320 98711 113960 103540 100870 97138 106560 90632 106720 123860 108070 108500 97554 78770 99165 112620 87547 109280 105140 101670 115070 104230 104360 98749 108590 95446 108680 123030 103390 103220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75105000 2750 3221 2619 5064 4177 4177 1 9606 Homo sapiens 0.029288002371458788 AVEPTWLTASNARPDR Unmodified 1782.9013 0.90129559 1276 A0A1B0GVT8;H0YD36;E5KNX5;E5KNW2;E5KNV8;E5KNU5;A8K5G6;P54098;A0A1B0GTU7 POLG DNA polymerase subunit gamma-1 yes no 0 0 1 8 0 1 47.869 47.927 3 1.4988E-06 12638 20230619_1888_Aki_TMTPro18x_K_F8 125.95 98.083 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2751 1276 2620 5065 4178 4178 1 9606 Homo sapiens 0.04116099752673108 AVEQEDELSDVSQGGSK Unmodified 1776.8014 0.80136636 3273 O60271;O60271-3;D6RHI8 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 0 1 0 1 46.962 46.962 3 0.027292 13100 20230619_1880_Aki_TMTPro18x_K_F1 56.121 43.955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2752 3273 2621 5066 4179 4179 1 9606 Homo sapiens -0.05596227162436662 AVETVHNLCCNENK Unmodified 1686.7454 0.74538858 3019 X6RLT1;H0UI80;Q8IXH7-4;Q8IXH7 NELFCD;TH1L Negative elongation factor C/D yes no 0 0 0 5 0 1 40.984 41.072 3 0.00076857 9978 20230619_1885_Aki_TMTPro18x_K_F5 65.374 52.238 310060 283170 314910 312150 378140 394330 352090 340540 378820 394660 455150 487870 477900 411600 411990 518400 509270 511810 286950 259430 320390 314030 386860 391450 357440 353090 387590 398780 464570 488550 483990 432620 426060 518550 486340 486180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56550000 2753 3019 2622 5067 4180 4180 1 9606 Homo sapiens -0.07051430084561616 AVEYLLMGIPGDR Oxidation (M) 1448.7334 0.73335055 3653 P54727;B4DEA3;B7Z4W4;B7ZA74;P54727-2 RAD23B UV excision repair protein RAD23 homolog B yes no 0 1 0 7 0 1 62.882 62.914 3 0.003047 19138 20230619_1887_Aki_TMTPro18x_K_F7 76.073 62.109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2754 3653 2623 5068 4181 4181 2348 1 9606 Homo sapiens 0.02693321234528412 AVEYLLMGIPGDR Unmodified 1432.7384 0.73843593 3653 P54727;B4DEA3;B7Z4W4;B7ZA74;P54727-2 RAD23B UV excision repair protein RAD23 homolog B yes no 0 0 0 7.5 0.5 1 1 63.826 63.848 2;3 8.8181E-08 19465 20230619_1888_Aki_TMTPro18x_K_F8 163.78 137.84 148690 118410 129020 155530 99783 159710 141750 143700 159480 208980 207120 216160 234990 204020 209600 240640 244000 265100 137320 108720 132490 154010 107540 160680 141120 149670 163570 207870 211540 218680 237780 212820 215660 242500 233270 251460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 394770000 2755 3653 2623 5069;5070 4182;4183 4183 2 9606 Homo sapiens 0.03937625097137243 AVEYYFASDASAVIEHTNR Unmodified 2142.0018 0.0017974991 3806 Q06210-2;Q06210;A0A6I8PRN4;A0A6I8PTT9 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 0 5.5 0.5 1 1 60.433 60.488 3 1.4322E-24 18085 20230619_1885_Aki_TMTPro18x_K_F5 197.14 189.73 34457 28098 34910 34373 26875 39967 37920 35910 42450 38113 36067 39693 41729 34058 44877 45480 42568 43227 31865 25777 35317 34276 28929 39871 37734 37031 42728 38459 37596 40034 42551 35924 45454 45393 40756 41079 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 195030000 2756 3806 2624 5071;5072 4184;4185 4184 2 9606 Homo sapiens -0.023523327749444434 AVFDETYPDPVR Unmodified 1407.667 0.66704513 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 3 0.816 1 1 1 53.275 53.31 2 2.3558E-17 15857 20230619_1881_Aki_TMTPro18x_K_F2 224.02 176.42 275120 254140 286350 307650 230570 293240 285350 299920 327050 366680 371620 461330 397220 360650 414380 427410 407520 489620 254690 233020 289280 306150 245690 297720 286020 307790 332790 369720 381030 460290 405530 378790 420790 431880 390540 464080 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 438880000 2757 1637 2625 5073;5074;5075 4186;4187;4188;4189 4186 4 9606 Homo sapiens -0.020481713358776688 AVFDVDK Unmodified 792.40177 0.4017693 76 A0A024R040;P55809;Q6IAV5;E9PDW2;B7Z609;P55809-2 OXCT1;OXCT Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes no 0 0 0 4.5 0.5 1 1 50.501 50.555 2 0.012714 14218 20230619_1883_Aki_TMTPro18x_K_F4 119.21 62.108 250170 209670 222790 266480 296500 320280 317600 313570 365820 263150 292060 275130 296450 250130 280940 325990 325750 286110 231150 192410 230010 265090 302750 319600 320330 319440 366670 269210 303230 278180 301760 262790 288660 324020 310970 272310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140670000 2758 76 2626 5076;5077 4190 4190 1 9606 Homo sapiens -0.002735509479975917 AVFGELPSGGGTVEK Unmodified 1446.7355 0.73545904 1409 B8ZZ75;A0A384MDW6;Q96C23;Q12915 GALM;Ibd1 Aldose 1-epimerase yes no 0 0 0 6 0 1 54.971 55.047 3 0.011232 16063 20230619_1886_Aki_TMTPro18x_K_F6 63.682 42.133 45075 34562 37536 37232 40815 49272 42504 40929 56230 42939 47181 46498 48744 40162 44034 55072 58946 54742 41605 31678 38808 37552 42259 48720 43173 42443 56104 43434 48892 46858 49491 42430 45741 55048 56226 52013 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30004000 2759 1409 2627 5078 4191 4191 1 9606 Homo sapiens 0.02996073244003128 AVFHEEEQR Unmodified 1143.5309 0.530886 1855 A0A8V8TQW4;O14617-4;O14617;O14617-5;O14617-2;Q6PK82;O14617-3 AP3D1 AP-3 complex subunit delta-1 yes no 0 0 0 1.5 0.5 1 1 32.79 32.82 3 8.263E-18 7095 20230619_1880_Aki_TMTPro18x_K_F1 221.94 200.55 89980 72826 86150 88381 83671 100510 98356 97602 110140 97338 122160 121190 129810 103480 104000 135930 136590 115060 83167 66808 87824 88152 87577 100630 98704 99916 111940 99132 125070 121440 130990 109010 108180 134830 130220 109590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216050000 2760 1855 2628 5079;5080 4192 4192 1 9606 Homo sapiens -0.035138210558670835 AVFLVPK Unmodified 772.48471 0.48471107 1761 A0A8I5KY07;A0A8I5KRP1;A0A8I5KRK1;A0A8I5KYQ0;A0A8I5KZB3;Q9H2M9;A0A8I5QJC9;A0A8I5KSQ5;A0A8I5KWJ9;A0A8I5QJG4;A0A8I5KUS2;Q9H2M9-2 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 3.5 0.5 1 1 56.432 56.454 2 0.046421 16961 20230619_1882_Aki_TMTPro18x_K_F3 87.839 27.436 155610 153780 186600 159220 249780 265800 218440 232110 293130 127370 135180 114650 120710 102150 164100 118160 132490 106140 144320 140770 187760 161870 253570 259960 224270 236490 287600 134290 145440 116710 125760 106630 164090 117980 126890 101040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70981000 2761 1761 2629 5081;5082 4193 4193 1 9606 Homo sapiens 0.08936810570651232 AVFPSIVGR Unmodified 944.54435 0.54435122 3112;3679;2695;3167;4132 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;A6NL76;B3KW67;Q7Z7J6;Q13707;P63267-2;B7Z6I1;F6QUT6;F6UVQ4;C9JFL5;B8ZZJ2;F8WB63;F8WCH0;P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;I3L3I0;I3L1U9;J3KT65;I3L3R2;A1E282;K7EM38;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;B3KUD3;A0A2R8YGF8;A0A6Q8PH58;G5E9R0;C9JZR7;C9JUM1;C9JTX5;Q6S8J3;A5A3E0;P0CG38 ACTA1;ACTC1;ACTA2;ACTG2;ACTG1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I no no 0 0 0 3.5 1.12 1 1 1 1 53.537 53.579 2 0.0016704 15222 20230619_1885_Aki_TMTPro18x_K_F5 127.56 78.206 2075800 1406900 1778500 2219700 2074600 3263300 2394200 2295300 3213400 2224800 2031500 2023800 2396800 1929700 2331400 2166500 2116200 2200400 1915100 1295400 1840000 2185700 2149900 3194400 2418900 2409600 3177800 2249500 2156200 2060400 2430900 2007000 2359000 2176000 2027400 2089300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 21229000000 2762 2695;3112;3167;3679;4132 2630 5083;5084;5085;5086 4194;4195;4196 4196 3 9606 Homo sapiens 0.06986081514048692 AVFPSIVGRPR Unmodified 1197.6982 0.6982261 3112;3679;2695;3167;4132 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;A6NL76;B3KW67;Q7Z7J6;Q13707;P63267-2;B7Z6I1;F6QUT6;F6UVQ4;C9JFL5;B8ZZJ2;F8WB63;F8WCH0;P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;I3L3I0;I3L1U9;J3KT65;I3L3R2;A1E282;K7EM38;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;B3KUD3;A0A2R8YGF8;A0A6Q8PH58;G5E9R0;C9JZR7;C9JUM1;C9JTX5;Q6S8J3;A5A3E0;P0CG38 ACTA1;ACTC1;ACTA2;ACTG2;ACTG1;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I no no 0 0 1 7 0.816 1 1 1 46.499 46.572 3 9.1996E-18 12030 20230619_1888_Aki_TMTPro18x_K_F8 197.21 141.09 1155800 1030500 1073500 1102000 1294900 1464600 1360000 1304100 1431500 825160 761050 557550 835190 584360 929380 854590 835490 610170 1068700 943900 1101000 1112200 1329600 1449900 1369000 1330400 1426000 852730 814800 580550 853930 616670 937710 841080 798740 582960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 45285000000 2763 2695;3112;3167;3679;4132 2631 5087;5088;5089 4197;4198;4199 4199 3 9606 Homo sapiens 0.1072849127954214 AVFQANQENLPILK Unmodified 1583.8671 0.86714192 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 1.5 0.5 1 1 60.806 60.811 3 1.2347E-07 18774 20230619_1880_Aki_TMTPro18x_K_F1 143.42 109.25 37614 32451 32215 39303 41993 44160 50355 45973 54020 51965 49782 50644 56997 46770 52213 56493 50898 54301 34751 29762 33373 39190 43058 44336 50366 47004 54669 52161 51605 51343 57700 48894 53130 56483 48735 51586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 780710000 2764 3387 2632 5090;5091 4200 4200 1 9606 Homo sapiens 0.09856303331753224 AVFVDLEPTVIDEVR Unmodified 1700.8985 0.89850163 2408;4144 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;F8VQQ4;B4DN58;F8VVB9;F8VRZ4;F8VS66;F8VWV9;F8VX09;F8VRK0;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;Q8N532 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 0 0 0 4.5 2.22 1 1 3 2 1 1 1 2 66.735 66.773 2;3 3.492E-14 19723 20230619_1883_Aki_TMTPro18x_K_F4 182.57 161.62 429540 357900 414210 443050 414220 425810 392960 442230 430780 441710 453300 502180 504670 424700 475200 501180 439320 587760 397110 328350 422100 440270 429500 432390 398980 450630 437870 448140 466670 504340 511910 444830 481950 507160 421720 556800 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 3791399999.9999995 2765 2408;4144 2633 5092;5093;5094;5095;5096;5097;5098;5099;5100;5101;5102;5103 4201;4202;4203;4204;4205;4206;4207;4208 4205 8 9606 Homo sapiens 0.07608831575157637 AVFWDIK Unmodified 877.46979 0.46978929 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 1.5 0.5 1 1 61.552 61.558 2 0.0075954 19105 20230619_1880_Aki_TMTPro18x_K_F1 123.96 69.55 413870 332390 380920 452660 401510 479400 465500 489980 520110 358550 345010 324810 341720 295480 413530 390190 364120 373610 382400 305300 390510 447460 417520 482740 467270 496280 519320 368610 362170 330570 352370 310770 416400 389740 348930 355000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288260000 2766 1863 2634 5104;5105 4209 4209 1 9606 Homo sapiens 0.02615318702657987 AVGAQASVGSR Unmodified 1001.5254 0.52540669 461 J3KQS6;A0A024R7L2;Q9NWV8;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;Q9NWV8-3;M0R2I2 BABAM1;HSPC142 BRISC and BRCA1-A complex member 1 yes no 0 0 0 6.5 0.5 1 1 32.211 32.276 2 0.00015411 6212 20230619_1887_Aki_TMTPro18x_K_F7 133.23 101.01 20007 10517 22305 19520 34306 37682 22528 28365 30696 15599 28681 35302 23599 26599 29108 12065 30658 30062 18477 9718.1 22626 19193 34378 36488 23668 29258 30668 17077 29353 34611 24553 26937 29490 13428 29314 28364 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15049000 2767 461 2635 5106;5107 4210;4211 4211 2 9606 Homo sapiens 0.02470500152344357 AVGAYSK Unmodified 694.36499 0.36498987 2782 CON__P15636 yes yes 0 0 0 5.33 3.09 1 1 1 39.443 39.461 2 0.015923 9232 20230619_1888_Aki_TMTPro18x_K_F8 110.63 31.18 + 462210 157500 842640 707510 2275100 1331400 998990 1877800 872870 283490 1090000 1383800 337790 644790 1356400 167800 1008100 811480 428740 149100 843350 677260 2204800 1312600 1079700 1834700 902810 403930 1079000 1329200 419050 662450 1335400 216400 966580 764650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 848200000 2768 2782 2636 5108;5109;5110 4212;4213;4214 4214 3 0.005581972260984003 AVGDGILCNTYIDSYK Unmodified 1787.84 0.84000047 2235 B4DKX4;B2R6E2;Q53EL6-2;Q53EL6 PDCD4 Programmed cell death protein 4 yes no 0 0 0 8 0 1 61.114 61.146 3 0.018064 18263 20230619_1888_Aki_TMTPro18x_K_F8 55.885 42.053 24378 23026 19847 24760 22059 27487 24626 25412 27345 29565 24746 19786 32608 25557 25275 25645 33761 32312 22529 21088 20606 24900 22844 27542 24765 26207 27633 29367 25819 20735 32676 26214 26297 26140 32210 30625 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72601000 2769 2235 2637 5111 4215 4215 1 9606 Homo sapiens -0.022405930616059777 AVGEEVWHSK Unmodified 1140.5564 0.55637247 806;3082 P13591-1;A0A087WTF6;P13591;P13591-3;P13591-4;A0A087WV75;A0A087WWD4;A0A087WX77;A0A087WTE4;P13591-5;A0A087WWJ5;A0A087X1V2;A0A087WVU1;A0A0C4DGS4;H7BYX6 NCAM1 Neural cell adhesion molecule 1 no no 0 0 0 4.5 0.5 1 1 43.743 43.806 3 6.0222E-06 11134 20230619_1885_Aki_TMTPro18x_K_F5 150.04 118.86 221660 206290 229080 302840 231550 265330 303110 278070 327700 281760 304230 310800 294060 250320 299260 294090 326330 327460 205200 189540 232650 297220 242250 271330 302120 283500 331300 285480 312910 312130 300730 262560 305680 296730 311970 310670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 329690000 2770 806;3082 2638 5112;5113 4216;4217 4217 2 9606 Homo sapiens -0.008283465334216089 AVGEIVQDYDSDK Unmodified 1437.6624 0.66235368 2892 E7ENV7;Q86YQ8-2;Q86YQ8 CPNE8 Copine-8 yes no 0 0 0 3 0 1 54.747 54.794 3 0.011529 16272 20230619_1882_Aki_TMTPro18x_K_F3 49.149 26.616 97591 88024 102870 101120 104110 140640 109940 118970 144130 108460 110240 105530 114360 96881 119330 126640 114690 117330 90338 80676 104100 101580 108440 138650 111580 122700 143450 110180 114870 107050 116830 101790 121040 126250 109800 111530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15250000 2771 2892 2639 5114 4218 4218 1 9606 Homo sapiens -0.03897100269296061 AVGFSSGTENPHGVK Unmodified 1485.7212 0.72120596 2554 B4DNM8;Q32P28-4;Q32P28;Q32P28-3;Q68CW0 LEPRE1;DKFZp547C166 Prolyl 3-hydroxylase 1 yes no 0 0 0 7 0 1 40.538 40.606 3 1.4551E-07 9488 20230619_1887_Aki_TMTPro18x_K_F7 123.36 111.92 36694 30228 33531 33898 46140 53092 42546 44756 49907 39473 43869 48893 45440 36722 39492 39146 54954 53686 33907 27707 34522 34187 46866 52034 43329 46136 50163 40479 45392 48772 46051 38436 41110 40113 52422 50842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47545000 2772 2554 2640 5115 4219 4219 1 9606 Homo sapiens -0.0022257918431023427 AVGHPFVIQLGR Unmodified 1292.7353 0.73533988 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;B7ZB16;B4DR01;B3KWD0 XPO1 Exportin-1 yes no 0 0 0 4.5 0.5 1 1 49.138 49.195 3 2.3309E-18 13389 20230619_1885_Aki_TMTPro18x_K_F5 236.32 194.87 169870 154950 167430 186730 170640 195970 178830 171740 214860 196120 182760 172510 184590 182870 180030 207140 223320 230410 157170 142070 170450 186060 177320 196920 180950 177820 215590 196300 189050 176600 188370 189550 185680 208980 213300 218570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1324800000 2773 3228 2641 5116;5117 4220 4220 1 9606 Homo sapiens 0.10068162825314175 AVGIWHCGSCMK Oxidation (M) 1420.605 0.60499569 3698 P61513;Q6P4E4;E9PEL3;C9J4Z3;M0R0A1;M0R2L6 RPL37A 60S ribosomal protein L37a yes no 0 1 0 2.5 0.5 1 1 42.904 42.969 3 0.00038412 10884 20230619_1882_Aki_TMTPro18x_K_F3 93.839 83.052 367570 336260 377590 374840 414780 445650 439820 433420 403460 219060 199260 177030 169440 150190 234680 186930 215770 172930 340210 308090 383290 376470 428240 445050 440820 437900 404440 231840 212830 180940 177120 157750 236170 186650 206330 164560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 298450000 2774 3698 2642 5118;5119 4221;4222 4222 2387 2 9606 Homo sapiens -0.08848260551872045 AVGIWHCGSCMK Unmodified 1404.6101 0.61008107 3698 P61513;Q6P4E4;E9PEL3;C9J4Z3;M0R0A1;M0R2L6 RPL37A 60S ribosomal protein L37a yes no 0 0 0 3 0 1 46.097 46.175 3 0.0015963 12406 20230619_1882_Aki_TMTPro18x_K_F3 81.92 59.445 233400 190290 228860 236530 216790 251590 256980 243820 241340 173270 163160 146470 158370 143200 177330 173970 179440 155650 215780 174600 232760 235300 227230 253040 256280 247810 243450 178190 170870 149940 162790 149410 180080 173340 171510 148120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150040000 2775 3698 2642 5120 4223 4223 1 9606 Homo sapiens -0.07603956689240476 AVGKEELGK Unmodified 929.5182 0.51819605 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;A0A8Q3SHG4;B7Z766;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 1 7 0 1 41.703 41.774 3 0.047433 10009 20230619_1887_Aki_TMTPro18x_K_F7 55.084 27.463 63030 42702 94713 88382 128880 124310 107320 117060 90362 68528 118490 94001 61995 54378 139200 35154 60415 44040 58462 39476 94036 85905 130300 122750 109010 118750 93970 72600 117750 92969 68625 56356 135260 36499 58453 41795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77167000 2776 874 2643 5121 4224 4224 1 9606 Homo sapiens 0.05061767551910634 AVGPEITK Unmodified 813.45962 0.45961853 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6;A0A994J6A3 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 6 0.816 1 1 1 44.161 44.246 2 0.0041158 11329 20230619_1885_Aki_TMTPro18x_K_F5 117.4 44.36 367970 249840 347920 360990 408700 426410 383960 384320 489870 406280 525440 539990 508690 468730 458570 390490 584260 556530 339730 229790 356040 356160 419080 425210 391910 396180 494080 413710 536720 539480 517640 481730 473700 403250 557610 526930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 848770000 2777 1860 2644 5122;5123;5124 4225;4226;4227 4225 3 9606 Homo sapiens 0.045427109774209384 AVGPHQFLGDQEAIQAAIK Unmodified 1992.0429 0.042874453 432 A0A024R782;P07738;B3KUR3 BPGM Bisphosphoglycerate mutase yes no 0 0 0 8 0 1 55.952 56.014 3 2.7404E-06 16145 20230619_1888_Aki_TMTPro18x_K_F8 100.41 89.366 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2778 432 2645 5125 4228 4228 1 9606 Homo sapiens 0.08653473055233007 AVGPSGGGGETPR Unmodified 1140.5523 0.55234972 4507 Q9H330-4;Q9H330 TMEM245 Transmembrane protein 245 yes no 0 0 0 3.5 0.5 1 1 31.737 31.806 2 2.5986E-07 6285 20230619_1882_Aki_TMTPro18x_K_F3 163.9 137.3 24641 15964 32816 33096 42866 48999 39937 39811 38281 32564 41699 54553 46454 40800 45660 22768 55723 50503 22817 14761 32815 32185 43629 48088 40392 41114 39216 33972 42932 53829 47236 41608 46863 24804 53182 47693 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 18468000 2779 4507 2646 5126;5127 4229;4230;4231 4229 3 9606 Homo sapiens -0.012304360271400583 AVGPTAEADK Unmodified 957.47673 0.47672516 2227 Q9H4P6;E7EQZ7;Q9UK43;Q95HA6;B2R5Y4;Q13123;Q9Y3Z5;D6REL4 IK;CSA2;DKFZp564B112 Protein Red yes no 0 0 0 3 0 1 39.103 39.158 2 0.0011194 9250 20230619_1882_Aki_TMTPro18x_K_F3 128.27 81.202 28245 17478 29271 30551 44930 48594 35884 43046 45660 32580 40057 48734 44742 36981 46146 25791 49794 47237 26086 16122 29891 29990 45193 47613 37017 44047 45709 33996 41637 48286 45578 37971 46981 27368 47589 44648 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22409000 2780 2227 2647 5128 4232 4232 1 9606 Homo sapiens -0.003714132074264853 AVGQGCVEIGSQR Unmodified 1359.6565 0.65649722 778 B4DTN0;A0A3B3IS71;A0A024RDV3;Q59HH0;P06400;B4DRB3 RB1 Retinoblastoma-associated protein yes no 0 0 0 5 0 1 39.768 39.858 2 2.4842E-06 9479 20230619_1885_Aki_TMTPro18x_K_F5 171.92 155.35 15940 13344 14003 11975 12339 16979 14337 13730 15623 17145 17531 15634 22258 13099 11776 24797 18646 15203 14727 12208 14352 12286 13035 16717 14385 14338 15931 17098 18077 15880 22034 14226 12609 24153 17750 14554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19784000 2781 778 2648 5129 4233 4233 1 9606 Homo sapiens -0.008944772619543073 AVGSISSTAFDIR Unmodified 1322.683 0.68302954 1549 A0A494C0R8;K7EIG1;O75153;I3L2B0 CLUH Clustered mitochondria protein homolog yes no 0 0 0 8 0 1 54.226 54.298 2 1.7488E-05 15413 20230619_1888_Aki_TMTPro18x_K_F8 157.97 111.51 57836 49844 59309 63199 48397 60944 62188 58323 65140 77804 64523 68626 85242 63108 70108 88035 73226 78096 53508 45734 59996 62696 51550 61725 62009 60303 66271 77289 67165 69892 85557 66638 71829 87455 70066 74263 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84733000 2782 1549 2649 5130 4234 4234 1 9606 Homo sapiens 0.03459534901048755 AVGTFAR Unmodified 720.39187 0.39187332 317;2897 A0A024R534;O94776;O94776-2;E9PCS8;E7EQY4;E7EV10;Q9BTC8-2;Q9BTC8;F6RRE2;Q53RX8 MTA2;MTA3;tmp_locus_6 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3 no no 0 0 0 3.67 3.09 1 1 1 37.753 37.769 2 0.007123 9090 20230619_1880_Aki_TMTPro18x_K_F1 127.66 47.103 617730 466060 541980 588350 696010 753020 678100 637970 907600 681620 717030 663310 735400 622020 646290 711050 892090 680870 570340 427840 559470 586140 710740 746330 691480 660870 903430 686670 744960 673050 746090 647710 672570 711310 849710 647790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 246720000 2783 317;2897 2650 5131;5132;5133 4235;4236;4237 4235 3 9606 Homo sapiens 0.020493058372721862 AVGVQCPVCR Unmodified 1144.5481 0.54813274 4326 Q96BH1 RNF25 E3 ubiquitin-protein ligase RNF25 yes yes 0 0 0 8 0 1 38.195 38.181 2 0.00029055 8751 20230619_1888_Aki_TMTPro18x_K_F8 137.18 116.66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2784 4326 2651 5134 4238 4238 1 9606 Homo sapiens -0.01835940046066753 AVHGGFEDCRPLNK Unmodified 1598.7624 0.76235927 1709 A0A7P0TAI3;Q8NEZ4;Q8NEZ4-2;Q8NEZ4-3;A0A804HJR9;A0A804HJU5;A0A804HIK3;H0Y765;A0A804HI08;H7C2V8;A0A804HLD4;A0A804HKW4;A0A7P0T8F0;A0A7P0T9K8;H7BY37;A0A804HKS3 KMT2C Histone-lysine N-methyltransferase 2C yes no 0 0 1 7 0 1 39.379 39.443 4 0.0030494 9047 20230619_1887_Aki_TMTPro18x_K_F7 76.588 64.027 22105 15738 19791 22677 24273 23808 24443 24066 28366 26029 26476 26636 24081 22714 22023 26727 30706 30662 20405 14472 20378 22337 24848 23996 24753 24623 28598 26222 27147 26878 24582 23770 22935 26998 29295 29081 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25040000 2785 1709 2652 5135 4239 4239 1 9606 Homo sapiens -0.013071414164642192 AVHSNPGDPALWSLLSR Unmodified 1818.9377 0.9376811 1819 Q6PGP7;A0A8V8TMA8;A0A8V8TMB2;A0A8V8TLS3;A0A8V8TLT2;A0A8V8TNJ4;A0A8V8TLU2 TTC37 Tetratricopeptide repeat protein 37 yes no 0 0 0 2 0 1 57.99 58.005 3 5.1991E-24 17825 20230619_1881_Aki_TMTPro18x_K_F2 212.72 160.23 36786 31478 37694 36371 30899 41908 38259 40800 47589 39361 37939 38172 39430 32127 40392 43965 37278 42968 34032 28857 38114 36417 32902 41915 38450 41708 47547 39833 39454 38613 40232 33973 40908 43923 35737 40801 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76928000 2786 1819 2653 5136 4240 4240 1 9606 Homo sapiens 0.06096976649428143 AVICAGLYPK Unmodified 1090.5845 0.58450147 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5;E7EWK3;A0A0G2JRP3;A0A0G2JQU7 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 0 0 3 0 1 53.655 53.707 3 0.00076402 15815 20230619_1882_Aki_TMTPro18x_K_F3 80.438 52.425 42718 39095 38588 40969 31708 45613 47540 44379 47722 49691 37418 43871 46261 41298 32177 44579 47244 50332 39498 35800 39474 41302 33986 45732 47009 45567 48234 49756 39298 44669 46298 42869 33867 45031 45078 47734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51029000 2787 4503 2654 5137 4241 4241 1 9606 Homo sapiens 0.042832601222926314 AVIEHNLLSASK Unmodified 1280.7089 0.70885036 1127 B3KM48;A0A0S2Z5H7;D6RAX7;Q9BT78;Q53FV3;D6RFN0;Q9BT78-2;D6RD63 COPS4 COP9 signalosome complex subunit 4 yes no 0 0 0 8 0 1 48.364 48.43 3 0.0002005 12888 20230619_1888_Aki_TMTPro18x_K_F8 97.86 80.534 99926 88473 101110 116830 100580 110500 118850 110640 119110 122700 141170 136710 146250 114610 126230 154520 141600 147420 92455 81206 102710 115540 104960 112220 118800 113400 122200 123760 143990 137480 148080 121090 129720 154160 135370 140070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97617000 2788 1127 2655 5138 4242 4242 1 9606 Homo sapiens 0.0797242914331946 AVIETADR Unmodified 873.4556 0.45559579 2866 Q6FGM6;E5KN59;E5KN55;Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes no 0 0 0 1.5 0.5 1 1 36.886 36.915 2 0.00016432 8404 20230619_1881_Aki_TMTPro18x_K_F2 171.38 131.72 84760 50016 90424 99410 115440 135070 101650 114310 116610 93337 121740 114960 119520 95001 102640 69947 139540 127500 78282 46236 91822 96685 117620 133270 103800 117610 118070 96151 124510 115010 121220 97448 106500 74025 133070 120530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170040000 2789 2866 2656 5139;5140 4243 4243 1 9606 Homo sapiens 0.01380621483701816 AVIGIGIEEEDRK Unmodified 1427.762 0.76200815 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 1 4 0 1 49.309 49.347 3 0.021195 13692 20230619_1883_Aki_TMTPro18x_K_F4 59.976 44.085 151150 127630 153670 166050 156900 169270 171250 168020 208190 187350 226600 216660 211900 180170 220860 221580 205750 247500 139810 117140 156020 164560 163110 170900 173010 172300 210600 189230 230950 217480 217120 189270 223620 223450 197300 234650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 412700000 2790 3337 2657 5141 4244 4244 1 9606 Homo sapiens 0.06523762135338984 AVIMGAPGSGK Unmodified 986.5219 0.52190122 4173 Q7Z4Y4;Q9UIJ7;Q9UIJ7-3 AK3 GTP:AMP phosphotransferase AK3, mitochondrial yes no 0 0 0 2 0 1 46.787 46.863 2 0.0039192 13006 20230619_1881_Aki_TMTPro18x_K_F2 107.21 70.185 67003 61025 65315 70557 76332 88555 87053 87325 101380 81565 95307 103720 95215 89761 94637 100460 102930 108810 61987 55933 66707 70721 78749 88144 87575 89134 102150 83449 98138 103820 97223 93571 96735 101240 98443 103240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47105000 2791 4173 2658 5142 4245 4245 1 9606 Homo sapiens 0.02810114054125279 AVIQVSQIVAR Unmodified 1182.7085 0.70845643 1484 A0A384NY14;Q7Z4W1;J3KS22;J3QS36;J3KRZ4;J3QS45;J3KSZ5;J3QL34 DCXR L-xylulose reductase yes no 0 0 0 3 0 1 53.097 53.156 2 9.9137E-06 15555 20230619_1882_Aki_TMTPro18x_K_F3 155.5 124.84 124450 104820 114130 127690 97998 118840 138060 129590 129870 145940 164560 166010 153210 140800 179190 161660 178950 187980 115020 96147 116670 126980 104190 121080 136650 132150 134160 147160 166800 166770 158020 147160 181640 163650 171290 178230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 446970000 2792 1484 2659 5143 4246 4246 1 9606 Homo sapiens 0.12441054214127689 AVITPHDFDECR Unmodified 1458.6562 0.65616287 624 A0A2R8YFI2;A0A2R8YEA4;A0A2R8Y5H3;A0A2R8Y7Q9;A0A2R8YEK8;A0A2R8YE18;A0A2R8Y5S9;A0A024RAJ5;A0A2R8Y7C5;Q9Y5P4-2;Q9Y5P4;Q9Y5P4-3;A0A2U3TZL3;A0A2R8YCI0 COL4A3BP Collagen type IV alpha-3-binding protein yes no 0 0 0 3 0 1 43.71 43.779 3 8.7407E-06 11259 20230619_1882_Aki_TMTPro18x_K_F3 136.7 121.5 40028 35208 42352 41659 43880 47054 39938 42610 53655 43770 50233 56169 53660 45871 48719 54633 60394 59651 37048 32280 42839 41621 45360 47080 40943 43871 53724 44571 51886 56105 54439 48117 50303 55025 57666 56607 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50791000 2793 624 2660 5144 4247 4247 1 9606 Homo sapiens -0.054818969817915786 AVITVQRPGR Unmodified 1095.6513 0.6512759 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;A0A7I2V3I5;A0A7I2V2T9;A0A7I2V3J7;A0A7I2V682;A0A7I2V407;A0A7I2V2J0;A0A7I2V5R0;E7EPA6;A0A7I2V2R2 LAMB1 Laminin subunit beta-1 yes no 0 0 1 5.5 0.5 1 1 35.62 35.71 3 5.7487E-05 7792 20230619_1885_Aki_TMTPro18x_K_F5 140.45 65.502 74122 49239 68421 72413 80042 82006 85259 87822 110360 91937 91465 92606 106270 76583 76430 89641 105050 86535 68415 45302 70177 71338 82361 82317 86418 89403 110230 92739 95346 93420 106510 80277 79884 89668 100100 82292 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99226000 2794 3015 2661 5145;5146 4248;4249 4248 2 9606 Homo sapiens 0.10727631728400411 AVIYNPATQADWTAK Unmodified 1647.8257 0.82567103 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4;G1UI33;A0A8I5KSC2;A0A8I5KTT7;Q9UE82 MYH10 Myosin-10 yes no 0 0 0 1 0 1 57.467 57.467 3 1.0197E-06 17457 20230619_1880_Aki_TMTPro18x_K_F1 131.35 103.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2795 3549 2662 5147 4250 4250 1 9606 Homo sapiens 0.027671225724134274 AVKDELLSEKPEIK Unmodified 1597.8927 0.89268797 946 U3KQE8;A0A0A0MRX8;A0A1B0GU97;Q5VW28;A0A1B0GW37;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;A0A2R8Y7V8;O00712-4;O00712-5;A0A1B0GWJ4;A0A1B0GVN4;A0A1B0GTC1;U3KPY9;A0A0S2Z4H3;Q5W0Y9;O00712-2 NFIB Nuclear factor 1;Nuclear factor 1 B-type yes no 0 0 2 7 0 1 52.612 52.682 4 0.00086299 14813 20230619_1887_Aki_TMTPro18x_K_F7 74.772 60.311 141050 134510 141930 135980 134960 151080 162710 162360 172680 175820 179850 176670 183650 155140 193400 196390 175550 182030 130570 123120 143980 137530 141470 151950 162790 165420 175670 176960 184390 178630 187730 162910 195530 195900 168180 173020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 319680000 2796 946 2663 5148 4251 4251 1 9606 Homo sapiens 0.11765733063521111 AVLASTPR Unmodified 813.47085 0.47085192 4399 Q96T76;Q96T76-8;Q96T76-9;Q96T76-5;Q5T454;Q96T76-7 MMS19 MMS19 nucleotide excision repair protein homolog yes no 0 0 0 4.5 3.5 1 1 37.578 37.57 2 0.0099608 9028 20230619_1880_Aki_TMTPro18x_K_F1 100.19 57.188 85582 61133 87102 91635 107260 113820 93694 103520 122110 96532 124590 116910 110180 92080 111330 87908 135500 112950 79084 56240 88671 90283 109460 113150 96173 106250 122770 98594 127030 116920 112970 95615 114380 89896 129250 107100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 74357000 2797 4399 2664 5149;5150 4252;4253 4252 2 9606 Homo sapiens 0.05665533071567097 AVLCPPPVK Unmodified 979.55247 0.55247306 1881;3680 A4D2P1;A4D2P0;A0A994J6T1;P63000;P63000-2;A4D2P2;A0A024R9T5;P60763 RAC1;hCG_20693;RAC3 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 3 no no 0 0 0 2 0 1 49.478 49.536 3 0.023187 14055 20230619_1881_Aki_TMTPro18x_K_F2 61.962 49.336 106460 81367 91290 92450 126210 169690 114330 116640 205850 106000 96059 103840 135670 80904 79221 119530 128150 121880 98282 74613 94570 93437 128490 164420 118660 122460 199910 107910 105400 104750 134390 86429 84463 119490 122100 115760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 468000000 2798 1881;3680 2665 5151 4254 4254 1 9606 Homo sapiens 0.06187892439163534 AVLDALLEGK Unmodified 1027.5914 0.59136099 630;2915 A0A024RAM4;P46821;A2BDK6;Q5H9P1;E9PGC8;P78559;P78559-2 MAP1B;DKFZp686F1345;MAP1A Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1;Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 no no 0 0 0 6.5 0.5 1 1 63.601 63.642 3 0.0042275 19502 20230619_1887_Aki_TMTPro18x_K_F7 72.275 33.707 551490 355500 406130 508170 399710 461360 371140 431970 443470 437410 508470 590060 553240 461810 628940 582750 538880 704710 508160 327010 425050 499750 415620 469250 378530 443640 450340 446330 521400 587700 566610 487120 633050 590580 517610 667440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357090000 2799 630;2915 2666 5152;5153 4255 4255 1 9606 Homo sapiens 0.0786689627452688 AVLDLESERR Unmodified 1186.6306 0.63060004 1003 Q59GQ7;A0A0C4DGA6;Q14527-2;Q14527;A8K5B6;H7C5K0 HLTF Helicase-like transcription factor yes no 0 0 1 4 0 1 41.792 41.835 3 4.1728E-05 10335 20230619_1883_Aki_TMTPro18x_K_F4 123.96 84.955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2800 1003 2667 5154 4256 4256 1 9606 Homo sapiens 0.04474996558064959 AVLENALR Unmodified 884.50797 0.50796571 4010 Q541A5;Q92890;Q92890-1;B7Z9N3;B4E3I3;Q92890-3;C9JNP9;C9IZG3 ufd1;UFD1L Ubiquitin fusion degradation protein 1 homolog yes no 0 0 0 6.5 0.5 1 1 47.457 47.541 2 0.0011817 12434 20230619_1887_Aki_TMTPro18x_K_F7 147.16 76.888 323570 281390 305740 327770 331760 362630 365840 352860 391850 375380 398190 344280 409530 343870 343270 451110 428290 401660 299180 257970 312610 327720 343450 363890 367690 361760 397970 377300 408330 351310 414510 360390 355510 448510 408780 382120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 513880000 2801 4010 2668 5155;5156 4257 4257 1 9606 Homo sapiens 0.061092046173257586 AVLENNLGAAVLR Unmodified 1338.7619 0.76194857 1191 A0A8Q3WK80;A0A8Q3WK74;Q9NZL9-4;Q9NZL9-2;Q9NZL9;A0A140VJP2;A8K7A4;A0A8Q3WK84;H7C0X7;Q9NZL9-3;B7Z1X8 MAT2B Methionine adenosyltransferase 2 subunit beta yes no 0 0 0 4.5 3.5 1 1 55.975 56.006 2 2.3903E-27 16855 20230619_1880_Aki_TMTPro18x_K_F1 243.77 203.42 240050 204160 234300 242190 272210 318450 252630 248020 257240 280690 284340 273620 302140 264090 290420 309070 304370 330770 221980 187210 239110 242430 279350 314600 256090 259090 263120 281750 291220 277850 307280 275140 296410 311020 291270 313840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 572740000 2802 1191 2669 5157;5158 4258;4259;4260 4259 3 9606 Homo sapiens 0.1061180692599919 AVLEQEETAAASR Unmodified 1373.6787 0.67867245 931 Q9Y2J2;Q9Y2J2-2;A0A0A0MSA4;A0A0A0MRA8;A8K968;B3KY28;Q9Y2J2-4;B3KT50;B7Z2D7;B7Z2G3;B7Z8M8;A0A0J9YY18 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 0 0 0 1 0 1 43.336 43.336 2 0.00035678 11595 20230619_1880_Aki_TMTPro18x_K_F1 117.79 96.891 25523 22942 25124 32577 26714 32118 25379 27218 32921 23459 26729 30262 28145 21894 26289 27858 33007 30821 23612 21073 25624 32076 27622 32385 25907 28059 32837 24133 27801 30126 28589 23183 27142 28060 31501 29250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27051000 2803 931 2670 5159 4261 4261 1 9606 Homo sapiens 0.006780256874662882 AVLETIR Unmodified 800.4756 0.47560295 2355;582 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9;B3KY97;B0AZM4;A8K6F0;A0A024R9L1;O60306 RRP12;AQR RRP12-like protein;Intron-binding protein aquarius no no 0 0 0 6 0 1 44.888 44.977 2 0.0037769 11682 20230619_1886_Aki_TMTPro18x_K_F6 119.57 8.2875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2804 2355;582 2671 5160 4262 4262 1 9606 Homo sapiens 0.06738417214330639 AVLFCLSDDKR Unmodified 1322.6653 0.66527099 4013 Q549N0;Q9Y281;Q9Y281-3;F8WDN3 CFL2 Cofilin-2 yes no 0 0 1 1.5 0.5 1 1 53.208 53.225 3 2.6279E-07 15678 20230619_1880_Aki_TMTPro18x_K_F1 168.22 121.87 185490 215440 231750 219770 208580 197850 254370 203720 180110 186960 174060 125720 185220 121580 279700 163690 141980 154830 172320 197090 231140 221490 219080 202090 251520 207460 187550 187930 179340 130450 192760 128010 274510 163690 137260 147110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181400000 2805 4013 2672 5161;5162 4263 4263 1 9606 Homo sapiens 0.016844963745143104 AVLFCLSEDK Unmodified 1180.5798 0.57981002 3495 V9HWI5;P23528;G3V1A4;E9PK25;E9PP50;B4E112;E9PQB7;E9PLJ3;E9PS23 HEL-S-15;CFL1 Cofilin-1 yes no 0 0 0 6.5 1.5 1 1 60.6 60.641 2 6.5598E-11 18028 20230619_1888_Aki_TMTPro18x_K_F8 196.99 148.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2806 3495 2673 5163;5164 4264;4265 4265 2 9606 Homo sapiens -0.0032566881113780255 AVLFCLSEDKK Unmodified 1308.6748 0.67477304 3495 V9HWI5;P23528;G3V1A4;E9PK25;E9PP50;B4E112;E9PQB7;E9PLJ3;E9PS23 HEL-S-15;CFL1 Cofilin-1 yes no 0 0 1 3.12 2.62 3 2 1 1 1 55.42 55.446 2;3;4 8.8332E-09 16603 20230619_1880_Aki_TMTPro18x_K_F1 188.66 155.82 487310 384560 424360 456720 420200 477540 484850 480600 520190 601450 523680 552520 639340 537760 483440 712620 605250 628740 450020 352740 436470 455670 438770 481440 486280 493970 528770 599770 542280 562700 641510 564410 502340 707920 578080 597980 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 29009000000 2807 3495 2674 5165;5166;5167;5168;5169;5170;5171;5172 4266;4267;4268;4269 4266 4 9606 Homo sapiens 0.0327826466004808 AVLGDDEITREPR Unmodified 1469.7474 0.74742071 990 A0A0C4DFT3;A0A590UKA8;A0A590UJ18;Q12959-5;Q12959-3;A0A590UJD9;A0A590UJ68;Q12959-6;A0A590UJS9;A0A590UJC5;Q12959-7;Q12959-2;Q12959;A0A590UJR5;A0A590UJ08;Q12959-4;Q12959-9;A0A590UJ29;Q12959-8;A0A590UJR4;A0A590UJX2;A0A590UJ64;E7EQD7;A0A590UK81;Q59FC4;A0A590UK48;B4DF78;A0A590UJ81;A0A590UJ25;A0A590UJL2;A0A590UK70;A0A590UK02;H7C166 DLG1 Disks large homolog 1 yes no 0 0 1 2 0 1 41.755 41.831 3 1.2644E-07 10667 20230619_1881_Aki_TMTPro18x_K_F2 117.7 92.318 82823 66835 88037 87760 101150 109000 99564 104090 113400 94721 104050 109590 107950 94083 102010 105730 125180 101250 76618 61362 89191 87187 103950 108490 100930 106410 114330 96710 107410 110060 109820 98144 105120 105820 119380 96306 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47749000 2808 990 2675 5173 4270 4270 1 9606 Homo sapiens 0.03133689987134858 AVLGEVK Unmodified 714.42759 0.42759012 3510 Q53YD7;P26641;P26641-2 EEF1G Elongation factor 1-gamma yes no 0 0 0 6.5 1.12 1 1 1 1 46.723 46.797 2 0.0090158 12465 20230619_1886_Aki_TMTPro18x_K_F6 119.89 9.5244 1524000 1118600 1191500 1288900 1561300 2235800 707210 1159800 549520 685980 777050 526890 522260 454930 966310 666970 789900 344260 1405800 1026100 1243900 1299100 1574600 2162900 760540 1245100 579490 714020 774660 541170 562060 482380 963250 649910 754390 332030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1376300000 2809 3510 2676 5174;5175;5176;5177 4271;4272;4273 4272 3 9606 Homo sapiens 0.0589534329427579 AVLGEVVLYSGAR Unmodified 1332.7402 0.74015049 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;A0A140T954 VARS Valine--tRNA ligase yes no 0 0 0 1.5 0.5 1 1 59.66 59.666 3 6.0648E-12 18347 20230619_1880_Aki_TMTPro18x_K_F1 156.36 134.62 14914 10951 15417 15627 14789 18540 18963 17250 18054 18443 18494 18917 19655 20111 18709 26017 21773 28578 13786 10067 15617 15432 15532 18486 18848 17747 18466 18593 19013 19239 20006 21009 19254 26167 20850 27091 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71588000 2810 725 2677 5178;5179 4274 4274 1 9606 Homo sapiens 0.08709002177397451 AVLGSSPFLSEANAER Unmodified 1646.8264 0.82639932 4260 Q8NI60;B4DED1;Q5T7A2;B4DVB7;Q8NI60-3;A1L377 ADCK3;CABC1 Atypical kinase ADCK3, mitochondrial yes no 0 0 0 6 0 1 55.89 55.965 3 1.7329E-14 16443 20230619_1886_Aki_TMTPro18x_K_F6 176.23 153.32 34678 28344 26784 39810 34335 34998 36172 38623 43491 36233 34500 32085 35142 29705 40499 42601 37334 40526 32005 26041 28055 39173 35122 35837 36582 39146 43523 36629 35849 32710 36102 31406 40927 42478 35774 38502 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107530000 2811 4260 2678 5180 4275 4275 1 9606 Homo sapiens 0.028859172214652062 AVLGTSNFK Unmodified 935.50763 0.50763136 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 2.5 0.5 1 1 49.302 49.371 2 9.765E-05 13831 20230619_1882_Aki_TMTPro18x_K_F3 156.01 95.856 1253800 973900 1113700 1129900 1026700 1220900 875520 911510 1141000 1073000 1040000 967660 1104800 860150 859360 1272000 1132100 974240 1157900 893170 1141500 1129500 1070900 1220700 900600 957120 1143800 1073000 1073800 984210 1113700 912570 895480 1253700 1079500 929070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 964550000 2812 1817 2679 5181;5182 4276;4277;4278 4277 3 9606 Homo sapiens 0.037297848974731096 AVLIAGQPGTGK Unmodified 1110.6397 0.63970816 4699 Q9Y230;B3KNL2;Q9Y230-2;M0R0Y3;B4DW30;X6R2L4;M0QXI6 RUVBL2 RuvB-like 2 yes no 0 0 0 2.5 0.5 1 1 48.251 48.322 2;3 3.2592E-07 13657 20230619_1881_Aki_TMTPro18x_K_F2 129.89 111.62 511340 411950 468010 510470 561190 563880 571560 559260 672250 679690 742970 761730 770220 678340 647710 768050 768640 785480 472450 377990 480640 508140 575590 566230 578800 574910 682100 682980 760150 766710 779600 707080 668140 771060 734380 745800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 433990000 2813 4699 2680 5183;5184 4279;4280;4281 4280 3 9606 Homo sapiens 0.08881389914427018 AVLITDQSILK Unmodified 1199.7125 0.71253876 3507 P26374 CHML Rab proteins geranylgeranyltransferase component A 2 yes yes 0 0 0 8 0 1 59.412 59.453 3 0.0095846 17560 20230619_1888_Aki_TMTPro18x_K_F8 73.781 46.667 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2814 3507 2681 5185 4282 4282 1 9606 Homo sapiens 0.1206709891716855 AVLLAGPPGTGK Unmodified 1079.6339 0.63389451 1442 B5BUB1;A0A384MTR5;Q9Y265;Q9Y265-2;E7ETR0;B3KRS7 RUVBL1 RuvB-like 1 yes no 0 0 0 2.5 0.5 1 1 52.398 52.457 2 7.508E-13 15235 20230619_1882_Aki_TMTPro18x_K_F3 207.83 160.09 124200 100070 112280 132980 114910 140130 134230 127920 142940 149140 148090 156100 158830 132280 144720 171140 165580 164520 114740 91893 115240 131640 119790 140830 134490 132130 145390 149790 152240 157350 161090 139290 148710 170910 158220 156340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102030000 2815 1442 2682 5186;5187 4283;4284 4284 2 9606 Homo sapiens 0.09726291402762399 AVLLDLEPR Unmodified 1024.5917 0.59169534 3493 P23258;A0A1B4Z394;A0A7P0T9G6;Q9NRH3;K7EIS0;K7EKE5 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain;Tubulin gamma chain yes no 0 0 0 4 0 1 58.112 58.116 2 0.070814 17487 20230619_1883_Aki_TMTPro18x_K_F4 63.816 37.432 101580 79372 87058 100070 87764 96927 101580 96979 108820 113690 115960 116910 119630 106020 118230 116020 114430 117120 93790 72851 89735 99312 91507 98260 101850 99552 110770 114090 118830 118150 121920 110230 120030 116520 109540 111220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158510000 2816 3493 2683 5188 4285 4285 1 9606 Homo sapiens 0.0803831599437217 AVLLGPPGAGK Unmodified 978.58622 0.58621603 1240 F8W1A4;A0A140VK93;P54819-5;P54819-2;P54819;P54819-3;B4DLK2;G3V213;F8VZG5;A0A5F9ZHP2;F8VY04;A0A5K1VW67;F8VPP1;A0A8Q3SHW4 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes no 0 0 0 2.5 0.5 2 2 51.717 51.769 2;3 0.00018817 15218 20230619_1881_Aki_TMTPro18x_K_F2 130.27 96.019 139390 122230 138090 132160 138090 142770 146510 133890 151410 147020 134490 140920 155810 134160 148710 169270 151500 147370 128930 111980 140330 132870 143570 143440 147400 137790 153380 147720 139800 143120 158030 140440 151610 168260 144900 140220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 671350000 2817 1240 2684 5189;5190;5191;5192 4286;4287 4286 2 9606 Homo sapiens 0.0960663720256889 AVLLLQEK Unmodified 912.56442 0.56441796 1440 B2R694;A0A384MTQ5;P48449-3;P48449;A0A0G2JQD0;P48449-2 LSS Terpene cyclase/mutase family member;Lanosterol synthase yes no 0 0 0 1 0 1 56.61 56.61 2 0.0017795 17088 20230619_1880_Aki_TMTPro18x_K_F1 113.5 40.256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2818 1440 2685 5193 4288 4288 1 9606 Homo sapiens 0.10463832454001931 AVLMEKPDVVVGTPSR Unmodified 1696.9182 0.91819121 4627 Q9NY93-2;Q9NY93;Q53HB9;G3V0G3;H7C3E9;F8WDT8 DDX56 Probable ATP-dependent RNA helicase DDX56 yes no 0 0 1 1 0 1 52.174 52.174 3 5.5225E-08 15265 20230619_1880_Aki_TMTPro18x_K_F1 127.66 93.052 55325 45760 51361 59310 49146 65674 64731 63739 68418 64888 63676 55617 78363 65619 56121 73148 64693 63207 51131 42003 52542 58853 51733 65843 64471 65277 69310 65260 66125 57276 78450 67759 58025 72789 61805 60145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45742000 2819 4627 2686 5194 4289 4289 1 9606 Homo sapiens 0.09760884314277973 AVLMEKPDVVVGTPSR Oxidation (M) 1712.9131 0.91310583 4627 Q9NY93-2;Q9NY93;Q53HB9;G3V0G3;H7C3E9;F8WDT8 DDX56 Probable ATP-dependent RNA helicase DDX56 yes no 0 1 1 8 0 1 48.233 48.299 3 0.00081336 12790 20230619_1888_Aki_TMTPro18x_K_F8 79.394 62.278 49030 43105 42959 54388 52014 54500 55419 52742 60125 59425 57615 58488 60097 52680 59234 60304 51035 60670 45311 39547 44350 53983 53392 55072 55812 54199 60908 59674 59358 59212 61212 54933 59806 60501 48976 57586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57215000 2820 4627 2686 5195 4290 4290 2831 1 9606 Homo sapiens 0.08516580451646405 AVLPLLDAQQPCYLLYR Unmodified 2032.0816 0.081568145 1652 D6RG15;A0A7I2V2U8;A0A7I2V5D3;Q6IBS0 TWF2 Twinfilin-2 yes no 0 0 0 3.5 0.5 1 1 64.335 64.355 3 0.00015636 20160 20230619_1883_Aki_TMTPro18x_K_F4 87.519 72.643 24375 19884 24322 22732 25435 24559 25765 26100 30033 26808 26843 27256 31176 25824 28267 29085 28885 27182 22538 18229 24714 22761 26316 24746 26097 26573 30230 27075 27886 27603 31538 26858 28832 29072 27619 25844 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 66866000 2821 1652 2687 5196;5197 4291 4291 1 9606 Homo sapiens 0.10681062365347316 AVLPVTCHR Unmodified 1051.5597 0.5596837 4383 Q96N67;Q96N67-6;Q96N67-2;Q96N67-5;Q96N67-3;Q96N67-4;A0A2X0SSK2;B3KRG0;A0A1B0GWE0;A4FU72 DOCK7 Dedicator of cytokinesis protein 7 yes no 0 0 0 1.5 0.5 1 1 36.473 36.502 3 0.00030073 8314 20230619_1881_Aki_TMTPro18x_K_F2 105.52 74.231 24253 13943 22801 22582 29458 25867 25829 31212 29713 22021 28380 26844 30885 26616 23999 25211 32870 31328 22374 12853 23372 22138 29928 26031 26388 31251 29974 22900 29272 27044 31125 27395 25019 25699 31353 29696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30360000 2822 4383 2688 5198;5199 4292 4292 1 9606 Homo sapiens 0.035966250395631505 AVLQAAR Unmodified 727.43407 0.43407249 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2;A0A024R3G0;J3KTF1;J3QL06 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 1 0 1 36.33 36.33 2 0.076193 8503 20230619_1880_Aki_TMTPro18x_K_F1 74.396 24.727 93361 60475 88905 101510 186590 247120 135850 147440 269390 51247 74456 75848 74638 64295 75467 50335 90850 75294 86182 55740 92293 100850 185350 236300 143800 154810 258390 58261 85541 75555 76335 65982 77421 52296 86668 71308 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42747000 2823 874 2689 5200 4293 4293 1 9606 Homo sapiens 0.05945281245658407 AVLQEFGR Unmodified 918.49232 0.49231565 4717 Q9Y394-2;Q9Y394;H0YJE4;Q659E8;H0YJ66 DHRS7;DKFZp564H1664 Dehydrogenase/reductase SDR family member 7 yes no 0 0 0 7 0 1 49.18 49.264 2 0.016109 13225 20230619_1887_Aki_TMTPro18x_K_F7 106.14 74.768 238100 198000 189000 219300 231060 280270 263770 263270 306080 235580 268000 278650 279020 230480 264920 281890 301790 286410 219810 181460 196960 220540 237920 278350 265260 269360 307650 241000 277340 279370 283760 242060 271750 282670 288290 272040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 385960000 2824 4717 2690 5201 4294 4294 1 9606 Homo sapiens 0.029809181002974583 AVLQFTPASWTYVR Unmodified 1637.8566 0.85657723 2152 A8KAH1;P48651;Q9BSY0;P48651-3;P48651-2 PTDSS1 Phosphatidylserine synthase 1 yes no 0 0 0 6 0 1 62.839 62.887 3 0.086777 19431 20230619_1886_Aki_TMTPro18x_K_F6 36.638 16.197 30545 30601 30614 37206 27725 36765 34515 38651 41222 35574 39538 39044 38903 37288 39839 39563 45422 42531 28284 28053 31099 37023 29264 37237 34628 39269 41521 36231 40621 39432 39805 38626 40799 39893 43386 40375 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58791000 2825 2152 2691 5202 4295 4295 1 9606 Homo sapiens 0.06316320677296972 AVLSAEQLRDEEVHAGLGELLR Unmodified 2404.271 0.27103649 346 P50454;A0A024R5K8;E9PJH8;E9PPV6;E9PR70;E9PMI5;E9PK86;E9PNX1;E9PRS3;E9PIG2;E9PQ34 SERPINH1 Serpin H1 yes no 0 0 1 4 0 1 59.282 59.284 4 9.2498E-68 18030 20230619_1883_Aki_TMTPro18x_K_F4 312.64 274.64 43665 32393 42820 45596 39745 49921 89533 88761 106600 54346 52628 61106 64710 52416 61950 65733 58031 75679 40346 29773 43598 45056 42906 50986 87800 87036 105270 57023 57140 61453 65533 55087 62854 66382 55684 71710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 571060000 2826 346 2692 5203 4296 4296 1 9606 Homo sapiens 0.12507181121600297 AVLSCIAPSAK Unmodified 1115.6009 0.60087982 4409 Q9BPX3;Q6NUR1;D6RA93 NCAPG Condensin complex subunit 3 yes no 0 0 0 3 0 1 51.587 51.652 2 0.004896 14874 20230619_1882_Aki_TMTPro18x_K_F3 103.7 49.151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2827 4409 2693 5204 4297 4297 1 9606 Homo sapiens 0.047703412883720375 AVLVDLEPGTMDSVR Oxidation (M) 1616.808 0.80797206 3748;3381;3970 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;B4DNW1;A0A075B724;Q3ZCM7;A0A183YE00;P04350;B4DJ43;B4DE77;M0QY85;M0R0X0;M0QY37;M0QX14;M0QZL7;M0R278 TUBB2C;TUBB4B;TUBB8;TUBB4A Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-4A chain no no 0 1 0 3 0.816 1 1 1 55.9 55.925 2 3.1383E-07 16727 20230619_1882_Aki_TMTPro18x_K_F3 127.83 106.37 126070 105850 124780 140490 124310 129320 132040 126870 131250 166300 182680 161160 163480 143320 161290 179680 175260 193420 116590 97182 126940 138860 129280 131590 132740 130880 135920 165730 184040 163330 167360 150370 164930 180680 167680 183500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 674270000 2828 3748;3970;3381 2694 5205;5206;5207 4298;4299;4300 4299 1988 3 9606 Homo sapiens 0.02424039255220123 AVLVDLEPGTMDSVR Unmodified 1600.8131 0.81305744 3748;3381;3970 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;B4DNW1;A0A075B724;Q3ZCM7;A0A183YE00;P04350;B4DJ43;B4DE77;M0QY85;M0R0X0;M0QY37;M0QX14;M0QZL7;M0R278 TUBB2C;TUBB4B;TUBB8;TUBB4A Tubulin beta-4B chain;Tubulin beta-8 chain;Tubulin beta-4A chain no no 0 0 0 4 0.816 1 1 1 60.388 60.415 3 8.4426E-11 18423 20230619_1883_Aki_TMTPro18x_K_F4 159.52 141.11 194470 178970 226360 172040 126610 185380 205650 221080 181880 261160 215590 229830 239580 237100 240880 275540 220560 307650 180200 163760 225520 174800 141690 187260 202280 224330 188360 260630 220850 234930 244000 246330 244030 277950 211830 291550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1004099999.9999999 2829 3748;3970;3381 2694 5208;5209;5210 4301;4302;4303 4303 3 9606 Homo sapiens 0.03668343117851691 AVLVQSAQKQSM Oxidation (M) 1304.6758 0.67583567 4824 yes yes 0 1 1 5 0 1 31.665 31.745 4 0.048826 6298 20230619_1885_Aki_TMTPro18x_K_F5 67.022 46.641 + 15310 11270 14990 13845 18482 18362 17719 18869 20337 13134 16236 16212 16349 15821 15920 18155 18510 15139 14146 10344 15298 13836 18887 18239 17992 19081 20382 13687 16858 16322 16680 16438 16350 18035 17662 14424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8686500 2830 4824 2695 5211 4304 4304 2927 1 9606 Homo sapiens 0.03568479028967886 AVLVVHPDK Unmodified 976.57057 0.57056597 3291 O75061-4;O75061;O75061-2 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes no 0 0 0 7.5 0.5 1 1 43.107 43.151 3 0.0017473 10797 20230619_1888_Aki_TMTPro18x_K_F8 92.062 51.075 26175 30549 31817 30066 28207 33161 34842 30273 37310 33298 34060 34576 35838 30384 34030 35157 36945 40573 24310 27939 31793 30468 29759 33247 34818 31224 37730 33541 35186 34899 36437 31744 34804 35553 35346 38466 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89334000 2831 3291 2696 5212;5213 4305 4305 1 9606 Homo sapiens 0.0813435068552053 AVMEQANLQR Oxidation (M) 1174.5765 0.57645598 1249 Q53ZP9;A0A140VKE7;B4DZR0;O95757;E9PDE8;B4DXT2;D6RJ96;B3KNM0 HSPA4L Heat shock 70 kDa protein 4L yes no 0 1 0 4 0 1 34.63 34.681 2 0.00027772 7412 20230619_1883_Aki_TMTPro18x_K_F4 129.42 102.17 15980 13137 15119 18705 11791 12490 11546 12610 11833 16899 18350 15080 20141 14997 12515 21920 20005 14480 14770 12071 15396 18342 12502 13106 11686 13000 12321 16784 18566 15412 20126 15838 13324 21473 19030 13853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9731500 2832 1249 2697 5214 4306 4306 789 1 9606 Homo sapiens -0.0038491886514293583 AVMEQIPEIQK Unmodified 1284.6748 0.67477304 2082 A8K5Y7;Q9HAV4;B3KPQ5;B3KNC6;H0Y3W3 XPO5 Exportin-5 yes no 0 0 0 6.5 0.5 1 1 55.41 55.479 3 0.0025796 16236 20230619_1886_Aki_TMTPro18x_K_F6 75.474 42.246 68261 54071 72506 71391 63261 59498 80418 69357 72965 71782 64653 59999 74409 58492 74643 73932 62018 71472 63139 49650 73148 70538 66765 61321 79853 70288 74452 72049 67154 61420 75595 61238 75201 73914 59526 67876 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145920000 2833 2082 2698 5215;5216 4307 4307 1 9606 Homo sapiens 0.04382264660034707 AVMHFLVNHVK Unmodified 1293.7016 0.70159692 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;O00429-7;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402 DNM1L Dynamin-1-like protein no no 0 0 0 6 0 1 51.041 51.118 4 3.145E-23 14381 20230619_1886_Aki_TMTPro18x_K_F6 250.12 219.04 103750 85816 101880 133910 91018 116380 119370 125750 138210 116050 114280 109780 123640 105450 115880 121260 125550 139460 95929 78940 103710 130950 96302 119130 119300 127590 138720 117640 118770 111630 125540 109800 118540 122600 120130 132210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285560000 2834 3212;3213 2699 5217 4308 4308 1 9606 Homo sapiens 0.0664941806189745 AVMISAIEK Oxidation (M) 976.52632 0.52631789 3931 Q15393;Q15393-2 SF3B3 Splicing factor 3B subunit 3 yes no 0 1 0 7 0 1 49.77 49.854 3 0.00055085 13493 20230619_1887_Aki_TMTPro18x_K_F7 105.52 18.213 44822 39265 39981 45689 49800 57413 48699 50114 72862 31822 40848 34239 38099 33257 45971 45059 42335 40442 41427 35995 41202 45762 50999 56992 49882 51210 71432 33309 43263 34694 39366 34949 46403 44836 40528 38468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40079000 2835 3931 2700 5218 4309 4309 2607 1 9606 Homo sapiens 0.03711578477020794 AVMISAIEK Unmodified 960.5314 0.53140327 3931 Q15393;Q15393-2 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 7.67 0.471 1 2 54.416 54.482 2;3 0.0010563 15510 20230619_1888_Aki_TMTPro18x_K_F8 85.731 8.9039 210710 171420 199470 211490 215410 248370 239480 240570 267310 227250 214520 220760 234780 191440 222800 244550 245130 236920 194740 157280 203910 210780 223250 248140 240900 245920 268600 230240 223550 223440 238410 201290 228120 244420 234260 225140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220280000 2836 3931 2700 5219;5220;5221 4310;4311 4311 2 9606 Homo sapiens 0.04955882339629625 AVMTSIK Unmodified 748.41531 0.41531088 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2;Q7L4K8;Q9P1N9 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 1.5 0.5 1 1 46.14 46.18 2 0.011512 12684 20230619_1881_Aki_TMTPro18x_K_F2 116.54 27.173 292710 267990 266270 248420 380090 512200 344800 320980 577280 175030 174310 173860 190460 138520 191690 189510 203690 182420 270660 245160 274430 255990 386130 493370 356370 337100 557610 185740 198480 175520 194010 146850 195540 189230 194630 173420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177420000 2837 1736 2701 5222;5223 4312 4312 1 9606 Homo sapiens 0.031039835595947807 AVNPFLADVDK Unmodified 1187.6186 0.61863837 3873 Q14008-2;Q14008;Q14008-3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 5.5 0.5 1 1 59.063 59.123 3 0.00027945 17732 20230619_1886_Aki_TMTPro18x_K_F6 86.114 58.965 54850 49731 60855 53892 45492 60795 61345 50920 63225 61153 63708 56771 68330 58214 64902 73032 60916 70204 50798 45554 61062 54207 48950 60722 60997 53009 64315 61151 65509 57932 69420 60789 65887 72970 58387 66676 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157350000 2838 3873 2702 5224;5225 4313 4313 1 9606 Homo sapiens 0.0323337981487839 AVNSATGVPTV Unmodified 1014.5346 0.53457439 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;Q3ZCS4;Q9H361;Q5VX58;H0YAS6;H0YB75;H0YAS7;H0YC10;L0R533 PABPC1;PABPC3;RLIM Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 yes no 0 0 0 5 0.816 1 1 1 49.943 50.005 2 1.0064E-05 13709 20230619_1885_Aki_TMTPro18x_K_F5 147.29 120.15 239480 201170 210950 243690 237940 251140 251240 244920 302360 308440 314890 272950 327310 280810 258520 377040 310000 292390 221260 184520 217260 242700 245420 253320 254120 252350 305730 307300 322660 279280 330440 294390 267590 372270 295990 278680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1011799999.9999999 2839 566 2703 5226;5227;5228 4314;4315 4314 2 9606 Homo sapiens 0.02788848718000736 AVNTQALSGAGILR Unmodified 1369.7678 0.76776223 2353 Q53GG3;B3KN57;B3KML1;O60749;O60749-2 SNX2 Sorting nexin-2 yes no 0 0 0 3 0 1 52.095 52.161 3 1.5002E-08 15098 20230619_1882_Aki_TMTPro18x_K_F3 113.54 91.883 33080 31601 33121 29104 30174 38966 26998 33587 49317 35478 32788 35424 42559 27760 36978 37096 38520 39343 30621 28903 33571 29759 31584 38539 28115 34707 48299 35785 34855 35695 42811 29427 37784 37252 36846 37341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51575000 2840 2353 2704 5229 4316 4316 1 9606 Homo sapiens 0.09766905437663809 AVNVYSTSVTSDNLSR Acetyl (Protein N-term) 1753.8483 0.84825697 2536 Q15691;B4DM33;A2VCR0 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes no 1 0 0 3.5 0.5 1 1 53.896 53.93 2 3.0246E-42 15906 20230619_1882_Aki_TMTPro18x_K_F3 219.33 208.16 55715 47891 51197 64541 65023 69055 74207 62598 76731 73762 75365 67327 81147 65417 62389 82900 83086 89449 51500 43971 52683 63835 66665 69338 74318 64732 77980 73776 77572 68625 81739 68509 65029 83322 79340 84866 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 641570000 2841 2536 2705 5230;5231 4317;4318 4317 2 9606 Homo sapiens 0.0014867717939068825 AVNYFSK Unmodified 827.41775 0.41775372 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;J3KS13 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 2.33 0.471 2 1 49.085 49.154 2;3 0.019704 13762 20230619_1882_Aki_TMTPro18x_K_F3 109.86 37.724 1245800 1025700 1100900 1172700 1376600 1434300 1374600 1312300 1773300 1025700 1046100 871440 993580 752500 1226300 1183500 1112900 855210 1150900 940340 1134900 1175800 1408400 1428100 1397500 1341400 1752700 1048900 1104500 889120 1026500 802970 1236300 1164200 1064100 816710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1120000000 2842 826 2706 5232;5233;5234 4319;4320;4321 4321 3 9606 Homo sapiens -0.0028584471108388243 AVPAEGVR Unmodified 797.43955 0.43955179 1401 Q13724;A0A384MDR6;Q58F09;A0A8I5KTK5;A0A3B3IS52;A0A8I5KQG9;A0A3B3ITC1;B8ZZE2;A0A3B3ITU6;B4E3B8;A0A3B3IRI1 MOGS;GCS1 Mannosyl-oligosaccharide glucosidase yes no 0 0 0 3.5 0.5 1 1 34.265 34.321 2 0.020124 7321 20230619_1882_Aki_TMTPro18x_K_F3 88.904 40.4 22940 12961 25033 30354 37933 42165 29581 32805 35297 27347 42060 46379 34620 27984 34191 24458 41493 36698 21187 12019 25480 29328 38162 41488 30499 34013 35861 28514 42536 45564 35539 29294 35120 25356 39596 34744 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65818000 2843 1401 2707 5235;5236 4322 4322 1 9606 Homo sapiens 0.03272960037475059 AVPEAPGTVECSK Unmodified 1343.6391 0.63911582 1382 B7Z1P4;A0A8S0MHV1;A0A8S0M5T0;A0A2X0SF93;Q2M1Z3 ARHGAP31 Rho GTPase-activating protein 31 yes no 0 0 0 4 0 1 44.306 44.35 3 0.0038345 11461 20230619_1883_Aki_TMTPro18x_K_F4 71.241 59.095 38601 32091 42875 43241 46071 46377 48652 45894 59166 44263 48584 51684 53863 44577 50029 53672 56306 55771 35730 29468 43246 42793 47635 46653 49220 46890 59216 45077 50600 51899 54626 46702 51306 53898 53809 52951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16216000 2844 1382 2708 5237 4323 4323 1 9606 Homo sapiens -0.018958175876150563 AVPEGFVIPR Unmodified 1083.6077 0.60767975 426 P43490;A0A024R718;A0A7P0T9I9;A0A7P0T895;A0A7P0T8L3;A0A7P0T973;A0A7P0TAS5;A0A7P0T931;A0A7P0T862;A0A7P0T8D2;A0A0C4DFS8;A0A7P0TA73;A0A7P0TBB7;A0A7P0T941;A0A7P0Z466;B7Z8W6;A0A7P0Z4N0;A0A7P0T9F0;A0A7P0TB17;A0A7P0T8Z3;A0A7P0T8R4;A0A7P0TAI8 NAMPT;PBEF1 Nicotinamide phosphoribosyltransferase yes no 0 0 0 8 0 1 54.397 54.464 2 0.0016333 15434 20230619_1888_Aki_TMTPro18x_K_F8 104.2 76.897 162200 141800 149110 165140 144570 165050 153760 148600 165980 183360 185040 191670 179770 155240 188630 213790 185110 212770 149950 129990 152580 164860 150850 166560 154940 153940 169260 183660 188820 192980 184070 164410 191620 213750 177330 202000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174190000 2845 426 2709 5238 4324 4324 1 9606 Homo sapiens 0.06922022231265146 AVPGNVAK Unmodified 754.43374 0.43373813 3613 P49792;A0A8V8TLA0;A0A8V8TL79;D3DX73 RANBP2;hCG_1994636 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 8 0 1 40.118 40.107 2 0.028638 9515 20230619_1888_Aki_TMTPro18x_K_F8 81.297 38.297 45732 33160 48913 52325 70180 74759 54913 64944 66695 53553 67102 74618 66203 61212 67293 44500 72433 73827 42281 30523 49756 51524 70793 73640 56647 66684 67262 55394 68849 74280 67678 62710 68561 46712 69263 69805 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5858000 2846 3613 2711 5239 4325 4325 1 9606 Homo sapiens 0.04669861525792385 AVPLALALISVSNPR Unmodified 1519.9086 0.9086128 3840 Q59EG8;Q13200;B4DM22;Q13200-3;Q13200-2;Q13041;H7C1H2 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 7.5 0.5 1 1 64.799 64.823 3 1.6364E-10 19856 20230619_1888_Aki_TMTPro18x_K_F8 149.69 133.8 25276 12862 11439 20419 21240 22418 15852 17682 20376 19044 26016 18895 22352 20964 19435 20031 26074 23216 23211 11862 12966 19996 21182 22402 16438 18428 20717 19182 26211 19288 22806 21506 20182 20324 24863 22027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175750000 2847 3840 2712 5240;5241 4326 4326 1 9606 Homo sapiens 0.16945484091070284 AVPLIHQEGNR Unmodified 1232.6626 0.66256887 2670 B7SBB1;O00170;D0EKE4;A5JGZ4;A0A804HKH9;D0EKE6;D5LTB3;C8CK04;C8CHN4;C0JXB8;D0EKE5;C0JXB9;C8CK05;A0A804HJ38;A0A804HIX8;D2CVN5;E9PMH2;V9GYQ3;A0A804HKK3;A0A804HKL7;A0A804HJ46;A7KS94 AIP AH receptor-interacting protein yes no 0 0 0 6.5 0.5 1 1 37.336 37.402 3 1.5067E-12 8476 20230619_1886_Aki_TMTPro18x_K_F6 205.53 180.1 135340 105290 115480 126040 137840 141620 145580 138290 187730 137530 153640 140560 138600 125550 148190 145690 162070 144520 124950 96593 119350 125800 141640 141990 147570 141500 187320 139240 158510 142120 142480 131040 151270 146040 154810 137340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 560070000 2848 2670 2713 5242;5243 4327;4328 4327 2 9606 Homo sapiens 0.055544090319017414 AVPPTYADLGK Acetyl (Protein N-term) 1172.6077 0.60773933 1286 A0A1L1UHR1;P21796;B3KTS5;C9JI87;B4DEI3 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 1 0 0 4 0.707 1 2 1 58.071 58.101 2 0.017912 17659 20230619_1882_Aki_TMTPro18x_K_F3 52.79 31.243 236660 212200 249530 258150 279620 301100 307820 299010 310880 291420 318280 324410 368200 297670 270790 373790 324870 361600 219060 194600 252950 257530 288640 301180 308830 305420 316840 295950 328350 327100 369490 312000 280640 373410 310570 343450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 914210000 2849 1286 2714 5244;5245;5246;5247 4329;4330;4331;4332 4329 4 9606 Homo sapiens 0.028339774406276774 AVPREELFVTSK Unmodified 1374.7507 0.75071518 3450 V9HWI0;P14550;Q5T621;V9GYG2;V9GYP9 HEL-S-165mP;AKR1A1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 1 7.5 0.5 1 1 48.371 48.447 3 0.00011374 12859 20230619_1888_Aki_TMTPro18x_K_F8 113.25 84.869 193340 179530 179020 162480 180670 171110 196320 185930 194600 179630 195170 205930 181570 171450 213370 200230 186980 191370 178820 164200 182930 165840 187710 172930 197020 188790 198320 182660 199800 206690 187330 179390 214880 200330 179180 181840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 323360000 2850 3450 2715 5248;5249 4333 4333 1 9606 Homo sapiens 0.07832984831838985 AVPSSPAGSAAR Unmodified 1069.5516 0.55162144 137 F8WBN8;B0QYH1;A0A024R1C5;Q8IWD4-4;Q8IWD4-3;Q8IWD4 CCDC117;FLJ33814 Coiled-coil domain-containing protein 117 yes no 0 0 0 7 0 1 33.565 33.646 2 0.00022908 6793 20230619_1887_Aki_TMTPro18x_K_F7 115.78 67.498 11751 6323.9 11342 9018.4 17461 15854 10869 13471 15580 11436 11363 12307 11875 10990 15562 7988.6 14882 10369 10839 5822.5 11626 8976.9 17460 15462 11493 13856 15438 11703 11894 12397 12286 11221 15677 8237.4 14214 9839.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6951800 2851 137 2716 5250 4334 4334 1 9606 Homo sapiens 0.01962769323813518 AVPSWFVR Unmodified 960.51814 0.51813647 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;A0A804HK69;A0A804HKU1;A0A804HIG2 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 4.5 0.5 1 1 56.343 56.378 2 0.0083129 16826 20230619_1883_Aki_TMTPro18x_K_F4 105.04 73.751 259210 220870 271860 255650 207500 278830 259750 267890 231150 251590 223080 254750 302830 229650 261130 355710 357260 321570 239850 202490 274090 255750 222260 279850 258190 273990 237030 255140 233030 257780 304520 244470 272070 353190 340650 305920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 370070000 2852 1736 2717 5251;5252 4335 4335 1 9606 Homo sapiens 0.03629812342569494 AVPTDEAR Unmodified 857.4243 0.42429566 369;3946 H3BSC1;A0A024R5Z8;P62491;H3BMH2;P62491-2;Q15907-2;B4DMN1;B4DQU5;M0R377;M0R2D0;H3BN38;Q15907 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B no no 0 0 0 1.5 0.5 1 1 32.334 32.364 2 0.0026883 6614 20230619_1881_Aki_TMTPro18x_K_F2 122.74 73.152 40075 18831 54671 50105 69180 69370 48627 56287 58328 41947 60061 71958 57907 55187 59223 29156 66055 59950 37069 17526 54493 48221 70080 68335 50573 58012 58893 44100 61536 71029 59269 56099 60399 31555 63093 56636 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159370000 2853 369;3946 2718 5253;5254 4336 4336 1 9606 Homo sapiens -0.010119515503788534 AVQADQERER Unmodified 1200.5847 0.58471248 4323 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 1 1.5 0.5 1 1 23.157 23.193 3 9.8683E-06 3835 20230619_1880_Aki_TMTPro18x_K_F1 141.44 105.48 36041 22133 55983 47812 96908 70813 63100 85730 48840 31867 62129 58693 43767 46617 67679 21997 73506 55437 33427 20485 55728 46469 96127 70225 65226 85019 51026 35871 62350 57976 46452 47172 68454 24529 70149 52366 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53193000 2854 4323 2719 5255;5256 4337;4338 4337 2 9606 Homo sapiens -0.0075564862418104894 AVQALCAVYEHWVPR Unmodified 1797.8985 0.89845882 3284 O60701;O60701-3;O60701-2;Q9NQ81 UGDH;GDH UDP-glucose 6-dehydrogenase yes no 0 0 0 4 0 1 62.318 62.323 3 8.1212E-12 19327 20230619_1883_Aki_TMTPro18x_K_F4 139.6 101.03 46779 34849 38787 44179 37999 46911 46175 48735 53821 54728 46389 46645 56033 45687 48089 60213 56251 66106 43170 31994 40095 43884 39819 47256 46322 49806 54138 54742 48369 47698 56504 47961 49560 60560 53810 62689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17768000 2855 3284 2720 5257 4339 4339 1 9606 Homo sapiens 0.03142553094176037 AVQAQGGESQQEAQR Unmodified 1585.7445 0.7444606 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;K4DIE0;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 1.5 0.5 1 1 29.515 29.551 3 5.5915E-42 5523 20230619_1881_Aki_TMTPro18x_K_F2 267.93 247.65 4546 1207.8 4596.3 3831.6 5378.5 9160.1 6686.5 5696.8 8663.8 6599.3 6752.4 6938 8536.9 7089.9 7726.4 3109.2 9170.8 6312.6 4186.2 1121 4678 3716.1 5588 8762.9 6720.5 6080.2 8632.7 6641.9 7097.8 7021 8617.9 7104.6 7922.4 3385.2 8740.8 5972.2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47086000 2856 349;3906 2721 5258;5259 4340;4341 4341 2 9606 Homo sapiens -0.024981851376423947 AVQCTSDYPEHVCEVLLTMER Unmodified 2536.1396 0.13962966 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DYA2;B4DRG9;B4E3R6 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 0 5 0 1 60.743 60.793 3 1.1906E-11 18233 20230619_1885_Aki_TMTPro18x_K_F5 132.45 125.35 11575 10074 12186 11688 10275 11910 11992 12644 13740 12164 13779 12834 13091 12797 12822 10701 13542 13771 10712 9235.5 12297 11680 10874 12044 12053 12853 13892 12342 14100 12996 13380 13089 13070 10968 12951 13047 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19044000 2857 1555 2722 5260 4342 4342 1 9606 Homo sapiens -0.06699456624482991 AVQEIMQEK Unmodified 1074.5379 0.53794521 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2;F8WD69;C9JBJ1;C9JTV6;H7C366 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 4 0 1 51.591 51.619 2 4.5766E-08 14745 20230619_1883_Aki_TMTPro18x_K_F4 200.6 99.003 112580 98178 101710 104110 109160 123380 121070 102240 123420 143090 143800 135840 160740 126770 122080 172300 161490 146940 104060 89928 104360 104940 113140 122870 121430 107040 126530 142200 147230 138000 161640 133490 127270 170840 154030 139890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110780000 2858 3488 2723 5261 4343 4343 1 9606 Homo sapiens 0.0036577550035872264 AVQFFVQALR Unmodified 1177.6608 0.66077796 1609;2515 B4DKK3;Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2;K7EIH8;K7ER44;K7EK03;K7EPP7 DNAJC7 DnaJ homolog subfamily C member 7 no no 0 0 0 6.5 0.5 1 1 63.057 63.097 2 0.0019748 19534 20230619_1886_Aki_TMTPro18x_K_F6 98.933 61.122 208090 180840 169170 172450 187810 257340 202290 209400 288960 114770 108600 110550 110220 100390 149240 119930 102840 112280 192200 165500 175460 176050 194660 252620 205660 214630 281720 121330 120080 112160 114390 104890 148360 119880 98910 106690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152470000 2859 2515;1609 2724 5262;5263 4344;4345 4344 2 9606 Homo sapiens 0.07905400013919461 AVQFTEEK Unmodified 950.47091 0.4709115 828;505 B7ZC39;A0A024R896;B7ZC38;Q9NR46;Q9NR46-2;F8WFB9;A0A140VJU5;A0A994J549;A0A087WW40;Q9Y371;Q9Y371-2 SH3GLB2;SH3GLB1 Endophilin-B2;Endophilin-B1 no no 0 0 0 3.5 0.5 1 1 45.681 45.725 2 0.0013951 12195 20230619_1882_Aki_TMTPro18x_K_F3 117.89 48.714 138980 93778 115930 134020 127420 128670 126270 138990 168170 149990 180960 167330 171950 149720 151290 159350 222500 183150 128190 86245 119930 131930 131450 130750 128740 141570 169370 151550 184540 168540 174890 155550 158150 161300 211930 173850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85988000 2860 505;828 2725 5264;5265 4346;4347 4346 2 9606 Homo sapiens -0.006305117191004683 AVQGFFTSNNATR Unmodified 1411.6844 0.68442653 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 3.5 0.5 2 2 49.623 49.679 2;3 1.9381E-29 13959 20230619_1882_Aki_TMTPro18x_K_F3 267.07 222.38 162350 127700 143890 151050 149850 175700 173430 160270 186740 172250 169760 155070 191180 150330 165110 197160 189630 183650 149940 117130 147860 150970 155930 175440 173880 165140 188820 172980 175810 158170 193150 157760 169880 196520 181150 174600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 670430000 2861 2361 2726 5266;5267;5268;5269 4348;4349 4348 2 9606 Homo sapiens -0.004948310102008691 AVQGGGATPVVGAVQGPVPGMPPMTQAPR Unmodified 2726.3996 0.39962459 2252 B2R802;P09012;M0R268;B4DDC7;M0QZG7 SNRPA U1 small nuclear ribonucleoprotein A yes no 0 0 0 4 0 2 58.314 58.317 3;4 4.5217E-09 17598 20230619_1883_Aki_TMTPro18x_K_F4 101.87 91.534 58403 53920 70253 58212 66391 67362 71421 71020 57471 65369 63005 38225 41927 37972 79688 43960 46387 43776 54137 49387 70243 58618 69271 67541 71334 72121 59593 65506 63377 40091 45228 39516 78333 44187 44687 41591 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148750000 2862 2252 2727 5270;5271 4350;4351 4350 2 9606 Homo sapiens 0.10548076768600367 AVQGMLDFDYVCSR Oxidation (M) 1675.7334 0.73342691 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 1 0 5.8 0.748 2 2 1 54.801 54.872 2;3 8.8064E-07 15976 20230619_1886_Aki_TMTPro18x_K_F6 122.2 103.78 94558 76274 84034 97980 91044 91887 103010 106370 110180 105370 123250 112130 123720 104790 104130 126140 125550 130350 87347 70012 86425 97087 94283 93729 103410 107640 112320 106730 125770 113370 125330 109470 107540 126590 119950 123740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 297180000 2863 161 2728 5272;5273;5274;5275;5276 4352;4353 4353 92 2 9606 Homo sapiens -0.07741046827800346 AVQGMLDFDYVCSR Unmodified 1659.7385 0.73851229 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 7 0 1 61.503 61.542 2 1.2083E-22 18457 20230619_1887_Aki_TMTPro18x_K_F7 241.31 231.26 656720 532340 707980 695100 422720 531520 584240 519960 565080 842910 791910 757300 923330 804040 795120 967770 854160 920030 607610 488720 710530 686550 466200 549600 579760 541140 587050 831640 807370 774450 932110 836490 815030 966740 817140 874120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 724380000 2864 161 2728 5277 4354;4355 4354 2 9606 Homo sapiens -0.06496742965168778 AVQSSTSIR Unmodified 947.50361 0.50360861 3864 Q13619;A0A087WWN2 CUL4A Cullin-4A yes no 0 0 0 6.5 0.5 1 1 32.299 32.363 2 0.0026779 6265 20230619_1887_Aki_TMTPro18x_K_F7 104.2 61.131 19519 11872 25844 21037 39027 44225 27021 30320 29067 13761 21860 20518 17836 15268 23098 10096 26796 20507 18068 10954 25895 20777 39166 42612 28015 31467 29161 15033 22595 20351 18590 15661 23522 10855 25559 19390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8248300 2865 3864 2729 5278;5279 4356;4357 4357 2 9606 Homo sapiens 0.027756954037727155 AVQVHQDTLR Unmodified 1165.6204 0.62036971 1948;1608 Q5TA58;B3KME0;B2RAD8;A0A6I8PTZ8;Q9UL18;A4FVC0;Q9UKV8-2;Q9UKV8 AGO1;EIF2C2;AGO2 Protein argonaute;Protein argonaute-1;Protein argonaute-2 no no 0 0 0 5.5 0.5 1 1 33.048 33.109 3 5.0118E-12 6800 20230619_1885_Aki_TMTPro18x_K_F5 213.8 167.37 51391 39398 51956 52784 62037 65720 59626 62173 70509 53933 62838 61030 60254 51886 57156 54888 73309 57083 47506 36187 52885 52371 63564 65386 60601 63527 70854 55192 64708 61335 61456 53977 59044 55250 69873 54254 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 96287000 2866 1608;1948 2730 5280;5281 4358;4359 4358 2 9606 Homo sapiens 0.04418433623504825 AVREPPEDEEEEDGREK Unmodified 2012.8923 0.89230663 2397 B4DHE5;B4DXB7;Q9NXD3;H0Y6U5;B3KRQ2;Q86XI2;Q86XI2-2 NCAPG2 Condensin-2 complex subunit G2 yes no 0 0 2 1 0 1 33.677 33.677 4 3.2889E-06 7502 20230619_1880_Aki_TMTPro18x_K_F1 110.77 94.463 24979 20220 26177 25974 21794 27445 27216 27513 37051 31535 31826 28170 34075 28289 24721 35886 33404 32044 23105 18559 26430 25781 23169 27632 27434 28207 36964 31571 32957 28778 34267 29581 25843 35692 31867 30481 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70806000 2867 2397 2731 5282 4360 4360 1 9606 Homo sapiens -0.07362383184977261 AVRPGETYTYK Unmodified 1283.651 0.65100113 2794 CON__Q28107 yes yes 0 0 1 1 0 1 39.643 39.643 3 0.038984 9963 20230619_1880_Aki_TMTPro18x_K_F1 54.772 27.635 + 56029 32676 57681 57447 59694 73000 60834 57433 92138 84448 128210 193350 99590 100740 131900 91964 123240 148050 51728 30153 58493 56136 61988 72228 62262 60542 93404 87171 129070 187870 104160 106400 132860 95838 118170 139940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166420000 2868 2794 2732 5283 4361 4361 1 9606 Homo sapiens 0.020521672179029338 AVRPGYPK Unmodified 886.50249 0.5024864 2802 CON__Q3ZBS7;B7Z553;D9ZGG2;P04004 VTN Vitronectin;Vitronectin V65 subunit;Vitronectin V10 subunit;Somatomedin-B yes no 0 0 1 3.5 0.5 1 1 35.554 35.606 3 0.003971 7781 20230619_1882_Aki_TMTPro18x_K_F3 98.997 57.017 + 192560 170960 205930 334000 670230 711970 410070 384110 969660 1105000 2267200 3294700 1182600 1590700 2391000 1234000 2190400 2395800 178250 157720 215860 327920 653410 683630 446090 435290 1005300 1143600 2226000 3181800 1302000 1675000 2392700 1314800 2099100 2262400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2958599999.9999995 2869 2802 2733 5284;5285 4362;4363 4362 2 9606 Homo sapiens 0.0546952582551512 AVSAIVQK Unmodified 814.49125 0.49125301 1623 A0A6Q8PFC2;Q9UNW9 NOVA2 RNA-binding protein Nova-2 yes no 0 0 0 8 0 1 40.483 40.476 2 0.0058911 9693 20230619_1888_Aki_TMTPro18x_K_F8 112.17 41.904 85887 44454 88619 96737 145850 193170 108360 140710 162210 36188 60734 59724 43271 43630 65926 32483 86902 66787 79256 41187 90741 94493 146330 186560 113070 144420 157730 43150 66345 59093 45928 44953 67597 34847 82805 63144 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42616000 2870 1623 2734 5286 4364 4364 1 9606 Homo sapiens 0.07658703731374317 AVSDWIDEQEK Unmodified 1318.6041 0.60411052 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;Q59GP7;K7EKJ9;K7ERM6;K7EJ09;K7ER69;K7EM82;K7ENK6;K7EQ75 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 2.6 1.02 1 1 2 1 55.88 55.908 2;3 1.0014E-09 16967 20230619_1881_Aki_TMTPro18x_K_F2 215.89 167.61 248000 218920 236020 221780 231080 284050 270820 263600 290360 280520 289190 282560 321620 250190 266380 298050 295930 288480 229340 200440 240650 224730 241730 282070 271390 271110 294670 282680 298110 285700 324430 261770 273640 298140 282810 274130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1173700000 2871 3823 2735 5287;5288;5289;5290;5291 4365;4366;4367;4368 4366 4 9606 Homo sapiens -0.0424473712391773 AVSEEQQPALK Unmodified 1198.6194 0.61936665 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;B4DNU2;A0A0G2JJB9;A0PJ72;F5GYK6 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 3.5 0.5 1 1 42.549 42.604 3 0.0018824 10639 20230619_1883_Aki_TMTPro18x_K_F4 82.261 57.044 197730 153770 185660 191190 222400 239500 222030 218720 256550 215750 251950 227030 243870 198480 228820 217270 244550 209420 182690 141120 190190 190640 228100 238050 224950 224780 259070 218640 258200 229090 248370 206700 233730 217680 233590 199120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 218300000 2872 1296 2736 5292;5293 4369;4370 4370 2 9606 Homo sapiens 0.028001744639368553 AVSEVCR Unmodified 819.39089 0.39088704 560 A0A024R983;P10155;P10155-3;P10155-5;P10155-4;P10155-2;H0Y9N5 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 0 0 3 0.816 1 1 1 32.579 32.642 2 0.010724 6627 20230619_1882_Aki_TMTPro18x_K_F3 117.6 66.562 62654 39977 78619 76579 138420 132570 104320 130710 92248 58464 95888 105420 82428 76354 102590 46663 120630 102680 57977 36921 79406 75010 137880 129710 106850 131600 94687 64373 97749 103870 85572 78173 104630 50692 115120 96994 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33487000 2873 560 2738 5294;5295;5296 4371;4372 4372 2 9606 Homo sapiens -0.026032765939248748 AVSILPLLGHGVPR Unmodified 1427.8613 0.86126868 638 B4DMD3;B4DY34;A0A024RAW9;Q9Y2W2 WBP11 WW domain-binding protein 11 yes no 0 0 0 7 0 1 58.637 58.686 3 1.6041E-08 17269 20230619_1887_Aki_TMTPro18x_K_F7 136.99 110.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2874 638 2739 5297 4373 4373 1 9606 Homo sapiens 0.1644524961075149 AVSISTEPPTYLR Unmodified 1432.7562 0.75619449 3016 Q12824;Q12824-2;G5E975;Q9H836;C9JTA6;A0A2R8Y5N5;B4DRT1;B4E117;A0A0G2JSE9;Q86WI8;A0A2R8YEE8;A0A0U1RRB8;Q86WI7;A0A0U1RQQ2 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes no 0 0 0 8 0 1 51.642 51.719 2 5.118199999999999E-28 14252 20230619_1888_Aki_TMTPro18x_K_F8 262.23 228.36 129050 105970 118180 125720 110820 127230 131580 122980 123920 157930 162130 156180 168000 137580 149610 174630 147530 153670 119250 97186 120900 125390 116270 128460 131280 126900 128340 157610 164770 158030 170320 144480 152490 173660 141220 146160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 338590000 2875 3016 2740 5298 4374 4374 1 9606 Homo sapiens 0.0571266362364895 AVSPLLLTTTNSSEGLSMGNYIGLINR Unmodified 2820.4691 0.46914395 1711 A0A7P0TAL9;A0A7P0TBA9;B7ZKK7;P19525-2;P19525;Q8IW76;A0A7P0Z4M0;Q05CP4;Q6PK38 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes no 0 0 0 5 0 1 64.752 64.797 3 2.1076E-39 20100 20230619_1885_Aki_TMTPro18x_K_F5 162.01 148.82 3512.9 3328.1 3506.7 3985.6 2874.6 3030 5250.2 1827.5 3250 3987.2 4783 2666.7 5325.8 4697.2 4328.9 4522.7 5081 5803.9 3251.5 3051 3557.8 3957.3 3091.6 3111.5 5086.6 2020.7 3485.3 3878.2 4845.5 2844.4 5371.4 4773 4462.1 4618.5 4859.2 5496.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30916000 2876 1711 2741 5299 4375 4375 1 9606 Homo sapiens 0.13172814198378546 AVSSNVGAYMQPGAR Oxidation (M) 1522.7198 0.71982575 142 Q8N523;A0A024R1I7;Q9UBB9;B4DSX8;B4DPE5;Q9UBB9-2 TFIP11 Tuftelin-interacting protein 11 yes no 0 1 0 8 0 1 39.418 39.405 3 5.6651E-05 9238 20230619_1888_Aki_TMTPro18x_K_F8 95.981 73.616 14765 11959 15844 15862 23755 22564 16938 18608 22760 16447 18949 19075 20863 17194 18193 15305 24614 17480 13660 10981 16117 15782 23845 22223 17656 19217 22696 16834 19702 19177 21110 17702 18880 15546 23439 16605 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17118000 2877 142 2742 5300 4376 4376 58 1 9606 Homo sapiens -0.020625365447131117 AVSTCAHLFWSGR Unmodified 1490.7089 0.70886714 4389 Q96QK1;Q53FR4;Q5HYM2 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 5 0 1 48.868 48.945 3 0.0026673 13294 20230619_1885_Aki_TMTPro18x_K_F5 76.196 61.505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2878 4389 2743 5301 4377 4377 1 9606 Homo sapiens -0.016858941283317108 AVTAFSSTETGSAEQGFK Unmodified 1816.8479 0.84792262 4040 Q5JSZ5;Q5JSZ5-5;A0A804HJR4 PRRC2B Protein PRRC2B yes no 0 0 0 6 0 1 53.091 53.168 3 5.4391E-20 15268 20230619_1886_Aki_TMTPro18x_K_F6 193.47 165.38 26964 20637 24247 29129 22307 25741 30319 26974 26831 31106 34092 31196 42297 36819 27636 41669 52064 39451 24902 18967 24862 28665 23538 26307 29998 27601 27839 31218 34963 31891 42242 38046 29778 41631 49491 37541 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19798000 2879 4040 2744 5302 4378 4378 1 9606 Homo sapiens -0.027827425404666428 AVTEGAQAVEEPSIC Unmodified 1559.7137 0.71373732 1339 E5KRK5;A0A291FIZ5;P28331-4;P28331;P28331-2;P28331-5;B4DJ81;P28331-3;Q9P1A0 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 1.5 0.5 1 1 53.102 53.119 2 3.329E-07 15836 20230619_1881_Aki_TMTPro18x_K_F2 157.95 147.24 19313 18492 21838 25228 22141 26544 20380 21916 25078 25341 25040 22352 29989 22860 23708 28109 25737 28512 17896 16975 21998 24927 22945 26627 20811 22802 25298 25344 25885 22860 30133 23860 24355 28171 24624 27066 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54398000 2880 1339 2745 5303;5304 4379;4380 4380 2 9606 Homo sapiens -0.04373099566851124 AVTELNEPLSNEDR Unmodified 1585.7584 0.75837933 145 A0A024R1K7;Q04917 YWHAH 14-3-3 protein eta yes no 0 0 0 2 0.816 2 2 2 47.002 47.048 2;3 2.2730000000000002E-57 13048 20230619_1881_Aki_TMTPro18x_K_F2 331.57 279.64 127710 99000 111310 125670 109560 127870 125290 125450 160310 151640 162570 152510 177080 149210 151670 180580 167170 167820 117920 90876 114510 124740 114510 129070 126510 129040 161410 151920 167230 154770 179060 155680 155690 180180 159800 159530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1233500000 2881 145 2746 5305;5306;5307;5308;5309;5310 4381;4382;4383 4382 3 9606 Homo sapiens -0.011069524291997368 AVTEQGAELSNEER Unmodified 1531.7114 0.71142914 3511 P27348;E9PG15;Q53RR5 YWHAQ 14-3-3 protein theta yes no 0 0 0 2 0.816 1 1 1 39.229 39.269 2 1.557E-46 9700 20230619_1880_Aki_TMTPro18x_K_F1 309.66 279.92 208190 162640 201880 205000 218950 238640 212980 207960 255610 260740 293320 289840 296350 263330 245710 299690 328820 294570 192400 149280 205850 203980 225960 238070 216470 216000 259530 261620 299210 292070 300100 274350 255620 300160 313580 279970 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3399199999.9999995 2882 3511 2747 5311;5312;5313 4384;4385 4384 2 9606 Homo sapiens -0.03315811980291983 AVTEQGHELSNEER Unmodified 1597.7332 0.73322721 3535 V9HWD6;P31946-2;P31946;B5BU24;Q4VY20;Q4VY19;A0A0J9YWE8;Q59EQ2;A0A0J9YWZ2 HEL-S-1;YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 0 0 2 0.816 1 1 1 32.698 32.742 3 6.2152E-118 7038 20230619_1880_Aki_TMTPro18x_K_F1 348.73 299.3 222240 176880 209660 214440 258350 262260 240670 250210 265350 255660 295890 317420 288470 255710 253950 311940 331090 313150 205370 162270 214750 214140 263880 261360 244530 256550 270140 259940 301940 317360 293150 268670 263410 312480 315920 297480 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3202799999.9999995 2883 3535 2748 5314;5315;5316 4386;4387;4388;4389 4386 4 9606 Homo sapiens -0.04173007231747761 AVTFIGNSTAIQELFK Unmodified 1737.9301 0.93013611 1954 A4UCU2 yes yes 0 0 0 3 0 1 64.443 64.475 3 1.099E-05 20328 20230619_1882_Aki_TMTPro18x_K_F3 101.2 87.786 9406 7570.5 8349.6 9909.1 7710.6 9963.3 10204 9588.2 8221.2 14626 14621 26168 24114 18519 27511 18740 15148 42869 8688.5 6950.4 8572.4 9812.8 8133.5 10059 10088 9965.6 8777.4 14844 15214 25734 24437 19410 27194 20194 14805 40360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26372000 2884 1954 2749 5317 4390 4390 1 9606 Homo sapiens 0.09068824329119707 AVTGTHTLALAAK Unmodified 1252.7139 0.71393574 3612 Q9BPX4;Q53XC2;P49770;H0YK01 EIF2B2 Translation initiation factor eIF-2B subunit beta yes no 0 0 0 2.5 0.5 1 1 43.797 43.873 3 2.5651E-05 11593 20230619_1881_Aki_TMTPro18x_K_F2 117.2 99.468 183540 142730 176620 185880 199060 224020 222980 208090 261480 178110 208020 184230 193130 162680 211330 187900 196230 163270 169610 131050 180420 184650 205710 223220 224530 212920 261730 181980 215190 186160 198430 169820 213600 187160 187670 155460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 207670000 2885 3612 2750 5318;5319 4391;4392 4391 2 9606 Homo sapiens 0.09768733005944341 AVTGWLESLR Acetyl (Protein N-term) 1172.619 0.61897272 4037 Q5JQQ4;Q9BVM2 DPCD Protein DPCD yes no 1 0 0 6.5 0.5 1 1 65.954 65.988 2 3.3332E-07 20744 20230619_1886_Aki_TMTPro18x_K_F6 111.82 98.613 3848.6 2919.7 5091.3 4229.7 2547.8 4839.2 4581.5 4107.5 5170.2 4949.6 7909.7 7414 7753.1 6785 5964.7 8089.6 7606.6 9687.8 3566.6 2684.2 5027.9 4172.1 2915.1 4823.7 4524.1 4272.5 5334.2 5034.1 7973.3 7401.5 7833.7 7088.6 6200.1 8190.4 7276.5 9177 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10054000 2886 4037 2751 5320;5321 4393 4393 1 9606 Homo sapiens 0.0395679953473973 AVTHLNNVK Unmodified 994.55598 0.55597854 1144 C9IYN3;A8K894;V9GYK2;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9-4;Q8WVV9;B7WPG3;Q8WVV9-5 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 0 0 0 1.5 0.5 1 1 37.081 37.111 3 2.7873E-05 8814 20230619_1880_Aki_TMTPro18x_K_F1 155.84 98.254 125230 77599 135910 135360 201610 214920 174540 165720 229470 83135 105110 79874 86062 71234 118520 69195 170650 77298 115700 71576 138160 132860 203490 210040 179090 170470 225220 88684 112760 81083 90118 73688 122500 70194 162130 73675 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75942000 2887 1144 2752 5322;5323 4394;4395 4394 2 9606 Homo sapiens 0.05848278537382612 AVTIFIR Unmodified 818.50142 0.50142377 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 5.5 1.12 1 1 1 1 53.641 53.697 2 0.015939 15345 20230619_1885_Aki_TMTPro18x_K_F5 110.61 28.349 1329000 1198900 1255600 1298600 1198000 1364800 1312400 1348800 1456900 993640 946230 757010 824220 714850 1130000 940290 956220 811440 1229100 1098200 1281000 1304700 1252600 1374900 1321300 1369500 1454300 1016800 989010 778880 859840 750700 1133000 934750 915580 772600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 729990000 2888 2633 2753 5324;5325;5326;5327 4396;4397;4398 4396 3 9606 Homo sapiens 0.08491311456612038 AVTISGTPDAIIQCVK Unmodified 1671.8866 0.88655673 2914 E9PFP8;P57721-4;P57721;J3QT27;Q5MJP6;P57721-2;P57721-3;P57721-5 PCBP3 Poly(rC)-binding protein 3 yes no 0 0 0 1 0 1 60.375 60.375 3 6.3012E-11 18677 20230619_1880_Aki_TMTPro18x_K_F1 145.81 139.23 20793 18107 21822 20549 15602 19315 23675 21151 27249 24567 28983 35770 29051 28709 31672 30022 32446 40914 19243 16596 21986 20550 16929 19668 23515 21590 27605 24988 29714 35541 29799 29906 32196 30762 31096 38714 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220750000 2889 2914 2754 5328 4399 4399 1 9606 Homo sapiens 0.0774889156032259 AVTKDEDEWK Unmodified 1219.5721 0.57208211 4680 Q9UKY7;A0A8I5KX85;Q9UKY7-2;D3DND1 CDV3 Protein CDV3 homolog yes no 0 0 1 5 0 1 45.018 45.095 3 0.046787 11671 20230619_1885_Aki_TMTPro18x_K_F5 57.348 35.791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2890 4680 2756 5329 4400 4400 1 9606 Homo sapiens -0.0289210480705151 AVTNHSVYCSTK Unmodified 1365.6347 0.63469914 1484 A0A384NY14;Q7Z4W1;J3KS22;J3QS36;J3KRZ4;J3QS45;J3KSZ5;J3QL34 DCXR L-xylulose reductase yes no 0 0 0 8 0 1 35.898 35.887 3 0.0017298 7846 20230619_1888_Aki_TMTPro18x_K_F8 80.469 60.728 43283 25691 39259 39471 45549 51307 41449 46319 51402 39973 48447 42420 39600 35920 42243 33884 49503 43633 39923 23662 40307 38868 46740 50844 42357 47473 51638 40833 49420 42744 40845 37166 43259 34660 47253 41361 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42323000 2891 1484 2757 5330 4401 4401 1 9606 Homo sapiens -0.03349282010526622 AVTPAPPIK Unmodified 892.5382 0.53820321 3346 Q6FG42;Q32Q14;O95182;Q6IB89;M0R0N0 NDUFA7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes no 0 0 0 1 0 1 45.832 45.832 2 0.0013894 12650 20230619_1880_Aki_TMTPro18x_K_F1 116.25 83.41 33817 30289 31916 36244 40102 56702 40546 42357 53458 31367 40565 40529 48673 39994 38213 48501 55577 45126 31274 27772 32748 36364 41144 55415 41242 43957 53138 32632 42570 40761 48939 41715 40051 48385 52935 42935 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23436000 2892 3346 2758 5331 4402 4402 1 9606 Homo sapiens 0.08763563282502673 AVTPLRPGELLFR Unmodified 1467.8562 0.8561833 4524 Q9H7B4;Q3B7A0;B0QZ88 SMYD3 Histone-lysine N-methyltransferase SMYD3 yes no 0 0 1 4.5 0.5 1 1 54.88 54.92 3 0.0018358 15809 20230619_1885_Aki_TMTPro18x_K_F5 69.352 54.686 76415 62326 65896 80939 61514 76493 69676 81273 84164 80548 81881 68642 81327 66527 79362 86363 84620 89475 70577 57213 67844 80135 64578 77767 70273 82655 84828 81079 84008 70228 82914 69781 81067 86616 80947 84933 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110450000 2893 4524 2759 5332;5333 4403 4403 1 9606 Homo sapiens 0.14096945748110556 AVTPPMPLLTPATPGGLPPAAAVAAAAATAK Unmodified 2793.5463 0.54627206 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8;A0A0J9YVR6;A0A0J9YWM1;H0YCP8 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 0 0 5.5 0.5 1 1 64.961 65.005 4 5.6092E-10 20171 20230619_1885_Aki_TMTPro18x_K_F5 101.3 87.711 18415 16631 14835 15284 13049 18766 14521 14556 21725 17921 15727 17283 18816 15759 15406 20824 20867 18081 17012 15214 15346 15602 13794 18618 14778 15251 21483 17928 16559 17521 18952 16572 16056 20676 19893 17212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 752970000 2894 1044 2760 5334;5335 4404 4404 1 9606 Homo sapiens 0.22124077205444337 AVTQALNR Unmodified 871.48756 0.48756462 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 8 0 1 37.278 37.264 2 0.014051 8378 20230619_1888_Aki_TMTPro18x_K_F8 86.794 35.007 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2895 1292 2761 5336 4405 4405 1 9606 Homo sapiens 0.046680339575118523 AVTTNQWHR Unmodified 1111.5523 0.55229014 1873 B4DWG1;A0A994J542;B3KM47;Q9Y6Y8;Q9Y6Y8-2 SEC23IP SEC23-interacting protein yes no 0 0 0 8 0 1 33.507 33.503 3 0.0019753 6915 20230619_1888_Aki_TMTPro18x_K_F8 90.601 72.376 74617 47834 93814 81549 103760 100050 86026 112840 98529 80921 118270 121730 98376 94145 122160 49123 109690 103840 69050 44101 93746 79831 106370 100030 88287 113460 100350 84704 119610 120690 102190 95650 122690 53413 105030 98071 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31030000 2896 1873 2762 5337 4406;4407 4406 2 9606 Homo sapiens 0.0009760876350810577 AVTTPGK Unmodified 672.38064 0.38063993 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;A0A7I2V2S8 NCL Nucleolin yes no 0 0 0 7.5 0.5 1 1 37.311 37.336 2 0.060858 8385 20230619_1888_Aki_TMTPro18x_K_F8 81.32 40.093 81277 50078 96392 107890 158990 148850 119410 152410 137450 95105 138790 148990 113210 122110 137920 87701 148130 129220 75155 46346 97638 104630 158900 147420 123320 153810 138890 100850 141340 147850 117710 124920 140080 91204 141500 122370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38911000 2897 1658 2763 5338;5339 4408 4408 1 9606 Homo sapiens 0.03134483743144756 AVTTPGKK Unmodified 800.4756 0.47560295 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;A0A7I2V2S8 NCL Nucleolin yes no 0 0 1 3 0 1 36.222 36.277 3 0.0034551 8073 20230619_1882_Aki_TMTPro18x_K_F3 88.819 42.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2898 1658 2764 5340 4409 4409 1 9606 Homo sapiens 0.06738417214330639 AVVAQHVAPPPGIVEIDSEK Unmodified 2055.1001 0.10005498 2988 F8W108;F8WCU9;Q68CP9-3;Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 yes no 0 0 0 6 0 1 52.817 52.894 4 6.2727E-05 15159 20230619_1886_Aki_TMTPro18x_K_F6 88.019 74.357 39372 31310 37674 39637 41836 41726 40881 38514 46174 44899 43214 42314 42163 39601 43739 46903 46506 50704 36387 28737 38479 39371 43073 41976 41440 39749 46638 44965 44435 42984 43170 41320 44622 47220 44499 48103 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76313000 2899 2988 2765 5341 4410 4410 1 9606 Homo sapiens 0.114708955408787 AVVEDDLR Unmodified 915.46616 0.46616048 903 Q9H3X2;Q96T14;Q86XV5;H0Y873;Q8N8Q2;D3DX07;Q6ZNF7;A0A090N7Y0;Q96P47-5;Q96P47;Q96P47-2;Q96P47-4 DKFZp761E2216;AGAP3;CENTG3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 yes no 0 0 0 1 0 1 41.681 41.681 2 0.046805 10851 20230619_1880_Aki_TMTPro18x_K_F1 71.491 41.306 77313 62854 81795 91508 93660 104170 90245 93052 113720 92609 104510 100980 113310 93247 99754 84186 120460 104100 71521 57772 82953 90175 96283 104080 91927 95821 114100 93931 108010 101850 114720 96010 102720 85927 114940 98721 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50958000 2900 903 2766 5342 4411 4411 1 9606 Homo sapiens 0.00504604138131981 AVVGVVAGGGR Unmodified 940.54541 0.54541385 3734 P62917;E9PKZ0;E9PKU4;E9PP36 RPL8 60S ribosomal protein L8 yes no 0 0 0 3 1.41 1 1 1 1 1 41.992 42.046 2 6.2891E-12 10960 20230619_1880_Aki_TMTPro18x_K_F1 203.19 153.83 648250 518660 564460 598970 648350 679060 665780 670990 695010 665140 667000 645550 813590 625120 613790 775900 789050 682190 598690 475590 581790 599510 667130 680600 671250 685810 705550 671990 691800 655920 815910 653680 638160 771610 752530 649340 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2570800000 2901 3734 2767 5343;5344;5345;5346;5347 4412;4413;4414;4415 4412 4 9606 Homo sapiens 0.07276295882957129 AVVHMDER Oxidation (M) 971.44946 0.44946455 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 1 0 2 0.816 1 1 1 26.643 26.746 3 0.023287 4402 20230619_1880_Aki_TMTPro18x_K_F1 60.59 43.204 5251.5 3308.9 4512.7 5485.3 6219.9 8463.7 6103.4 6902.8 7459.2 5706.9 6976.2 6225.4 6112.5 5557.2 4705.2 6023.9 8493 7150 4843.3 3049.7 4679.7 5393.5 6339 8287.5 6202.6 7123 7495.5 5851.8 7134.6 6278.2 6206 5779.3 5024.8 6105 8080.1 6784.1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2832800 2902 4503 2768 5348;5349;5350 4416;4417;4418 4416 2795 3 9606 Homo sapiens -0.03740220019449225 AVVHMDER Unmodified 955.45455 0.45454993 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 0 0 2.5 0.5 1 1 32.335 32.404 3 0.00056295 6514 20230619_1882_Aki_TMTPro18x_K_F3 131.03 90.044 90492 69839 89249 96759 106570 124260 111670 100610 121930 85032 89164 94066 94289 78107 83245 92789 116080 92921 83637 64169 91091 95814 109510 122970 112560 104040 122230 87134 93286 94550 95587 81875 86695 92995 110590 88341 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73580000 2903 4503 2768 5351;5352 4419;4420 4420 2 9606 Homo sapiens -0.024959161568403943 AVVIVDDR Unmodified 885.49198 0.4919813 1450;1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V464;A0A7I2V4N2;H7C367;C9IZL7;A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2 NONO;SFPQ Non-POU domain-containing octamer-binding protein;Splicing factor, proline- and glutamine-rich no no 0 0 0 4.5 1.12 1 1 1 1 43.275 43.347 2 0.0010002 11062 20230619_1882_Aki_TMTPro18x_K_F3 151.27 90.47 2790500 2299700 2494600 2431300 2942900 3181500 3093900 2797200 3457200 3164500 3397400 3059800 3408300 2601500 2773000 3827400 3689200 3277500 2578100 2106900 2565200 2455600 3025700 3152600 3121100 2894100 3498500 3176200 3486000 3098300 3447000 2764100 2887200 3792400 3518100 3120300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3150099999.9999995 2904 1112;1450 2769 5353;5354;5355;5356 4421;4422;4423 4421 3 9606 Homo sapiens 0.044654983804207404 AVVLAANHFGR Unmodified 1153.6356 0.63562584 87 Q2TB59;A0A024R0C3;Q13423;A0A590UJM2;A0A590UK29;E9PCX7;A0A590UJI3;D6RAI5 NNT NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 4.5 0.5 1 1 43.897 43.941 3 2.219E-17 11192 20230619_1885_Aki_TMTPro18x_K_F5 172.59 140.66 60608 58178 67794 69611 74085 74195 87676 77949 100110 43588 46576 32455 44679 38266 53780 42089 41504 34088 56158 53331 68383 69440 76739 74782 87924 78486 98948 45669 50159 33739 46107 39482 53783 41834 39778 32489 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91712000 2905 87 2770 5357;5358 4424;4425 4425 2 9606 Homo sapiens 0.06495345211374115 AVVLAGFGGLNK Unmodified 1144.6604 0.66044361 2013 Q9HCJ6;A8K288 VAT1L Synaptic vesicle membrane protein VAT-1 homolog-like yes no 0 0 0 5 0 1 61.071 61.121 2 4.0781E-12 18362 20230619_1885_Aki_TMTPro18x_K_F5 217.02 181.57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2906 2013 2771 5359 4426 4426 1 9606 Homo sapiens 0.09389980294099587 AVVLMGK Oxidation (M) 732.4204 0.42039626 691 P05388;A8K4Z4;A0A024RBS2;F8VU65;P05388-2;Q53HK9;F8VWS0;Q6NSF2;F8VPE8;G3V210;F8VW21;F8VRK7;F8VQY6;F8VZS0;F8VS58;F8VWV4 RPLP0 60S acidic ribosomal protein P0 yes no 0 1 0 1.33 0.471 2 1 44.856 44.898 2;3 0.0098364 12074 20230619_1881_Aki_TMTPro18x_K_F2 114.67 77.022 684750 522700 611260 731720 922060 953740 851150 822550 979370 473840 550670 408890 429960 350010 638760 493920 558350 370110 632340 480340 632460 724210 931030 944400 865640 840080 971700 496610 579370 417040 452650 370520 640560 487630 533700 353530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 439340000 2907 691 2772 5360;5361;5362 4427;4428 4428 421 2 9606 Homo sapiens 0.0434828742221498 AVVLMGK Unmodified 716.42548 0.42548163 691 P05388;A8K4Z4;A0A024RBS2;F8VU65;P05388-2;Q53HK9;F8VWS0;Q6NSF2;F8VPE8;G3V210;F8VW21;F8VRK7;F8VQY6;F8VZS0;F8VS58;F8VWV4 RPLP0 60S acidic ribosomal protein P0 yes no 0 0 0 3 0 1 50.945 51.016 3 0.016975 14588 20230619_1882_Aki_TMTPro18x_K_F3 76.592 47.019 128130 103670 114890 116810 132290 157660 148540 140760 181880 86856 89998 71605 90083 68531 104120 103120 106280 68927 118370 95040 118120 117450 136630 155910 149750 143520 179420 90410 96586 73457 92609 72617 105730 101180 101410 65966 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105820000 2908 691 2772 5363 4429 4429 1 9606 Homo sapiens 0.05592591284823811 AVVPGPAEHPLQYNYTFWYSR Unmodified 2494.207 0.20697967 2716 C9JEL3;B9A044;B8ZZ50;Q59FE1;Q53RG0;O60573-2;O60573 EIF4E2;tmp_locus_9 Eukaryotic translation initiation factor 4E type 2 yes no 0 0 0 3 0 1 60.501 60.53 3 1.8899E-12 18621 20230619_1882_Aki_TMTPro18x_K_F3 143.57 139.3 11526 7920.7 9948.5 8657.6 8925.2 8792.2 9305.4 11171 11969 12298 10926 11725 13304 10488 11691 12244 11902 14952 10635 7263.9 10211 8695.3 9362.4 8940.8 9451.4 11270 12011 12346 11368 11882 13420 10963 11932 12425 11407 14161 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11967000 2909 2716 2773 5364 4430 4430 1 9606 Homo sapiens 0.01964445755311317 AVVPGVKPQDWISAAR Unmodified 1692.9311 0.93113916 580 H0YDT8;A0A024R9K7;Q9NPA0 EMC7;C15orf24 ER membrane protein complex subunit 7 yes no 0 0 1 4 0 1 55.841 55.849 3 0.0090102 16609 20230619_1883_Aki_TMTPro18x_K_F4 66.913 41.594 91307 73071 91354 114010 108420 121340 106290 102130 123020 111860 120310 109850 117720 97569 106820 117960 120860 121910 84418 67224 93193 111760 111230 121650 107810 105960 124250 112510 123380 111240 119710 102160 109650 118400 115510 115740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165430000 2910 580 2774 5365 4431 4431 1 9606 Homo sapiens 0.11239083488703727 AVVQVFEGTSGIDAK Unmodified 1519.7882 0.7882229 1233 A0A140VK65;P21281;Q59HF3;H0YC04 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 6.5 0.5 1 1 59.641 59.695 2 1.0214E-24 18018 20230619_1886_Aki_TMTPro18x_K_F6 265.13 226.82 75930 55082 64003 77306 51567 57203 62413 67385 69237 91619 85136 90104 93483 74466 92334 99173 93646 108720 70069 50630 65892 75962 54876 59598 62569 68804 70895 91183 87018 90987 95047 78684 94027 99767 89691 103110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36975000 2911 1233 2775 5366;5367 4432;4433 4432 2 9606 Homo sapiens 0.04912031306798781 AVVVCPK Unmodified 771.4313 0.43129529 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 1.5 0.5 1 1 43.068 43.109 2 0.010404 11245 20230619_1881_Aki_TMTPro18x_K_F2 124.12 72.436 986800 484430 954530 1126500 1216300 1611100 1165400 1235400 1566100 1084900 1341100 1570300 1715900 1499100 1048500 989500 2031500 1888900 909940 449520 977680 1089300 1244200 1581600 1190200 1283900 1562400 1120800 1403500 1568200 1709000 1522800 1131500 1053200 1933200 1785000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1084400000 2912 3776 2776 5368;5369 4434;4435 4435 2 9606 Homo sapiens 0.03643689796490435 AVVVCPKDEDYK Unmodified 1421.6861 0.68606601 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 1 5.5 1.12 1 1 1 1 45.875 45.948 3 3.8538E-06 12015 20230619_1885_Aki_TMTPro18x_K_F5 120.84 108.05 1436300 1351600 1387300 1430800 1759600 1437800 1642900 1690700 1345200 1733600 1697100 1204000 1614100 1141200 1397600 1463800 1414900 768710 1329000 1237700 1418600 1439600 1790200 1461200 1654800 1710300 1403600 1732200 1717700 1245700 1637700 1196700 1426100 1427200 1349200 739860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2285700000 2913 3776 2777 5370;5371;5372;5373 4436;4437;4438 4437 3 9606 Homo sapiens -0.007909580364639623 AVVVTDGER Unmodified 944.49271 0.49270958 1317 A0A1W2PPH1;A0A1W2PQH3;P23368;A0A1W2PQT3;A0A1W2PQY8;A0A1W2PQ37;A0A1W2PQF8;P23368-2;Q8NAS5;Q6TCH8;E9PMB9;B2R995;Q16798-2;Q16798 ME2;ME3 NAD-dependent malic enzyme, mitochondrial;Malic enzyme;NADP-dependent malic enzyme, mitochondrial yes no 0 0 0 2 0 1 36.977 37.038 2 0.013916 8524 20230619_1881_Aki_TMTPro18x_K_F2 78.06 58.805 50873 35935 59003 61844 65259 79793 64993 68971 86098 61882 78620 92039 84024 77531 66694 72384 112530 116010 47063 33120 59383 60512 67356 79008 66209 71018 86127 63892 81318 91534 84859 80206 70678 75239 107250 109710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116440000 2914 1317 2778 5374 4439 4439 1 9606 Homo sapiens 0.01824293029483215 AVVVVDDR Unmodified 871.47633 0.47633123 2614 B4DWI8;Q8WXF1;A0A024RDP4;Q8WXF1-2;X6RDA4 PSPC1 Paraspeckle component 1 yes no 0 0 0 2.5 0.5 1 1 40.482 40.546 2 0.0026883 9852 20230619_1882_Aki_TMTPro18x_K_F3 122.74 83.079 145530 104120 132520 154200 176810 188720 153950 158990 223040 176640 198460 199990 214930 158690 169400 191780 223580 213340 134360 95767 136480 151950 179650 187490 158660 164940 222220 178400 205430 200570 216560 166940 176160 193320 213330 202440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 578380000 2915 2614 2779 5375;5376 4440 4440 1 9606 Homo sapiens 0.035452118633770624 AVVYSNTIQSIIAIIR Unmodified 1760.0196 0.019619815 3738 P63096;P63096-2;A0A3B3IUA8 GNAI1 Guanine nucleotide-binding protein G(i) subunit alpha-1 yes no 0 0 0 8 0 1 66.061 66.08 3 0.014704 20402 20230619_1888_Aki_TMTPro18x_K_F8 44.598 34.645 16788 14220 21869 19188 29932 23877 26907 25609 29516 22797 21146 20667 15707 17168 23383 22014 23244 18266 15566 13057 21890 19038 30283 23848 27375 25961 29578 23133 21865 20961 16602 18058 23626 21842 22207 17407 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5065300 2916 3738 2780 5377 4441 4441 1 9606 Homo sapiens 0.1700107900853709 AVWLPAVK Unmodified 882.53272 0.5327239 1172 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087X253;B4DWG4;B4E261;Q96EL6;B4DIL5 AP2B1;DKFZp781K0743 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 4 0 1 59.157 59.159 3 0.022805 18004 20230619_1883_Aki_TMTPro18x_K_F4 66.682 22.235 56756 51191 60784 58654 46776 52966 58736 58185 69028 50347 40417 35108 42860 35032 52506 42397 46687 32910 52545 46917 61187 58582 50025 54122 58854 58882 68560 50871 42916 36344 44124 36536 52838 41997 44631 31409 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56139000 2917 1172 2781 5378 4442 4442 1 9606 Homo sapiens 0.08675884490696717 AVYTLTSLYR Unmodified 1185.6394 0.63937381 694 A0A024RBT2;Q502X2;A0A0S2Z5U7;Q9NR28-2;Q9NR28;Q53HB7;H7BZQ7;H7BZK7;A0A2U3TZH2 DIABLO Diablo homolog, mitochondrial yes no 0 0 0 5 0.816 1 1 1 57.668 57.712 2 0.00014237 16969 20230619_1885_Aki_TMTPro18x_K_F5 140.84 92.935 129160 114140 119920 124970 116580 148240 122810 135690 187340 66019 52037 42093 59303 40386 97414 57304 63170 46124 119420 104580 122580 125670 121830 147810 125410 137590 181440 69977 60086 43853 62079 42666 96264 56819 60654 43990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176370000 2918 694 2782 5379;5380;5381 4443 4443 1 9606 Homo sapiens 0.05397970194553636 AVYTQDCPLAAAK Unmodified 1406.6864 0.68640036 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 50.09 50.169 3 3.7298E-05 13627 20230619_1887_Aki_TMTPro18x_K_F7 114.72 102.17 344370 290650 324250 339460 311560 340400 376730 354940 381090 420080 393930 436760 415440 355350 415630 478280 461180 482270 318340 266490 330980 338930 326300 344570 376230 363430 388780 421410 404910 439770 423400 375740 425500 478670 440960 457940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 454400000 2919 1637 2783 5382;5383 4444;4445 4445 2 9606 Homo sapiens -0.0006753831660262222 AVYTSGK Unmodified 724.37555 0.37555455 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 8 0 1 38.557 38.543 2 0.021789 8880 20230619_1888_Aki_TMTPro18x_K_F8 102.77 58.353 34846 17598 48747 45569 70172 63314 53680 69047 44828 30612 51973 46447 29798 34436 57824 21194 46002 38453 32251 16361 48647 43917 70568 62770 54869 69056 46382 33458 52037 46048 32492 35189 57446 22604 44076 36368 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15711000 2920 3892 2784 5384 4446 4446 1 9606 Homo sapiens 0.0023417988053324734 AWAGSPK Unmodified 715.36532 0.36532422 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;A0A286YFL2;Q9UMY2;Q8N5M8;Q9UMY3 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 2 0 1 42.836 42.917 2 0.064959 11183 20230619_1881_Aki_TMTPro18x_K_F2 85.359 31.894 159580 100320 180230 183480 213840 233100 182770 185620 250070 187430 213690 278430 242790 219210 233380 152780 309740 314560 147510 92593 181860 178940 218660 230720 188190 193000 249370 192250 222690 276090 246610 224710 241220 163910 295660 297040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148100000 2921 1334 2785 5385 4447 4447 1 9606 Homo sapiens -0.0037438305405430583 AWALGQGLECFETSVK Unmodified 1794.8611 0.86107026 4453 Q9BW83;Q9BW83-2 IFT27 Intraflagellar transport protein 27 homolog yes no 0 0 0 8 0 1 63.426 63.448 3 1.8262E-06 19284 20230619_1888_Aki_TMTPro18x_K_F8 118.08 113.61 29603 26218 28313 26493 29815 32671 37474 28325 34341 31810 31736 28855 35396 29677 32458 35246 32878 36245 27377 24004 28887 26832 31038 32485 37218 29352 35057 31889 32833 29473 35866 30889 33097 35378 31477 34403 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160120000 2922 4453 2786 5386 4448 4448 1 9606 Homo sapiens -0.004565829621014927 AWAYYSAVNPEK Unmodified 1397.6616 0.66156582 2794 CON__Q28107;A0A0A0MRJ7;P12259 F5 Coagulation factor V;Coagulation factor V heavy chain;Coagulation factor V light chain yes no 0 0 0 1 0 1 56.512 56.512 3 0.016474 17073 20230619_1880_Aki_TMTPro18x_K_F1 62.338 48.659 + 34612 29764 34023 38946 42074 49701 44229 43324 55602 38561 45739 49213 46467 36281 52176 40666 44846 43682 32010 27319 34771 38702 43165 49277 44803 44577 55544 39582 47465 49027 47644 38092 52486 41007 42971 41462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60677000 2923 2794 2787 5387 4449 4449 1 9606 Homo sapiens -0.021358501276608877 AWCVNCFACSTCNTK Unmodified 1877.7317 0.73172912 1047 A0A0J9YXC7;A0A8Q3WLX8;P48059-3;A0A8Q3WKK6;A0A8Q3WKP0;P48059-5;A0A8Q3WKI3;P48059-2;A0A0M3HER1;P48059;P48059-4;A0A8Q3WKJ2;A0A8Q3WLN4 LIMS1 LIM and senescent cell antigen-like-containing domain protein 1 yes no 0 0 0 3 0 1 54.678 54.725 3 0.0053418 16236 20230619_1882_Aki_TMTPro18x_K_F3 63.85 60.513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2924 1047 2788 5388 4450 4450 1 9606 Homo sapiens -0.17202747179703692 AWDDFFPGSDR Unmodified 1311.552 0.55201537 225 B4DZZ0;B3KQB4;A0A024R371;O75915;F8WF90;C9JQU6;F8WF33;B4DWQ6 ARL6IP5 PRA1 family protein 3 yes no 0 0 0 4 0.816 1 1 1 62.066 62.093 2 0.00018513 19211 20230619_1883_Aki_TMTPro18x_K_F4 130.53 112.31 248500 231300 261360 290360 270050 325010 327730 359000 367100 291320 304320 320810 337850 296210 363410 300730 342800 395680 230080 212150 264820 288860 281540 326680 328330 362480 369020 299010 316910 323500 345020 306720 367610 307650 328550 374620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 414160000 2925 225 2789 5389;5390;5391 4451;4452 4451 2 9606 Homo sapiens -0.09129855747005422 AWDIAIATMK Unmodified 1118.5794 0.57941609 3789 Q02790;B2R9U2;F5H1U3 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 1.5 0.5 1 1 62.699 62.704 3 0.00014473 19836 20230619_1881_Aki_TMTPro18x_K_F2 121.83 93.503 124510 104710 117910 119670 85960 120200 112970 118690 125320 145080 134240 135060 148590 126070 143570 154210 143860 149810 115100 95988 119880 119680 92764 121440 112800 122050 127440 144870 137970 137260 150950 131840 146150 154250 137680 142310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 348690000 2926 3789 2790 5392;5393 4453 4453 1 9606 Homo sapiens 0.02486956259690487 AWEDYYK Unmodified 973.41815 0.41814765 507 A0A024R8A7;Q96I24 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 0 0 0 5 0 1 52.933 53.005 2 0.035935 15043 20230619_1885_Aki_TMTPro18x_K_F5 82.671 59.652 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2927 507 2791 5394 4454 4454 1 9606 Homo sapiens -0.0696246978191084 AWEEYYK Unmodified 987.4338 0.43379771 3197;2644;4322 M0R0C6;Q92945;A0A384P5V3;M0R3J3;M0QYG1;M0R251;M0R263;B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31 KHSRP;FUBP1 Far upstream element-binding protein 2;Far upstream element-binding protein 1 no no 0 0 0 5 0.816 1 1 1 52.833 52.89 2 0.0065321 15143 20230619_1886_Aki_TMTPro18x_K_F6 132.29 115.34 1628600 1376800 1516900 1621000 1464500 2005300 1809700 1880800 1923800 2249900 2119700 2209500 2392500 1975600 1966700 2365000 2409200 2412500 1505400 1262400 1550700 1622200 1537800 1994800 1808700 1939200 1963200 2252200 2177900 2236500 2412800 2066700 2033900 2371900 2300800 2290900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1320400000 2928 3197;2644;4322 2792 5395;5396;5397 4455;4456;4457 4457 3 9606 Homo sapiens -0.060421832648671625 AWEITKK Unmodified 874.49125 0.49125301 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 1 2 0 1 46.838 46.913 3 0.085103 13002 20230619_1881_Aki_TMTPro18x_K_F2 49.57 23.631 143860 123050 154400 145510 184850 184340 185000 191050 195950 207770 226020 200030 203340 164470 213990 181650 210680 171330 133140 112830 156370 145680 189390 183680 186910 195070 200260 208780 229360 202230 208660 171770 217040 181830 201340 162990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64073000 2929 3432 2793 5398 4458 4458 1 9606 Homo sapiens 0.048987037313850124 AWEVDTCR Unmodified 1035.4444 0.44437918 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITV3;A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 3.5 0.5 1 1 43.509 43.565 2 0.0022595 11158 20230619_1882_Aki_TMTPro18x_K_F3 129.56 77.777 285020 243810 255470 269790 304060 391270 377750 355560 346040 341660 381980 378740 382800 304240 341380 378930 408490 378950 263400 223420 262950 271970 314290 385490 375520 365270 355700 347120 390260 380380 388580 320310 351760 379500 389980 360040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284630000 2930 3647 2794 5399;5400 4459 4459 1 9606 Homo sapiens -0.07192523882099522 AWGAVVPLVGK Unmodified 1095.6441 0.64406526 572 Q9NUQ9;A0A024R9G4;A0A8V8TMP7;Q68D08;Q3ZTR9;E5RI16;E5RJL8;E5RIR8;E5RJE1 FAM49B;DKFZp686B04128;BM009 Protein FAM49B yes no 0 0 0 4.33 0.471 2 1 61.967 61.987 2;3 3.9057E-09 18778 20230619_1885_Aki_TMTPro18x_K_F5 190.08 156.01 520990 399120 513350 620310 356110 383670 430100 417250 405840 524120 485780 459350 508830 449070 333840 583190 579040 528090 481490 367230 520270 604830 384140 406610 429100 427340 418610 521740 495270 469100 510610 470590 357440 580050 551290 502350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 389800000 2931 572 2795 5401;5402;5403 4460;4461 4461 2 9606 Homo sapiens 0.1000689912798407 AWGNNQDGVVASQPAR Unmodified 1668.7968 0.79683052 3682 P60880;P60880-2 SNAP25 Synaptosomal-associated protein 25 yes no 0 0 0 6 0 1 42.756 42.85 2 1.0875E-10 10733 20230619_1886_Aki_TMTPro18x_K_F6 158.2 130.46 9550.3 8879.3 8130.1 9269.1 2811.5 3695.8 5256.7 5336.7 4362.1 9521.1 11129 9149.6 9123.5 8074 9511.8 10425 11844 10141 8827.6 8130.3 8301.4 9262 3412.8 4204.7 5146.6 5459.9 4775.7 9374.4 11000 9275.6 9395 8487.2 9798.7 10420 11298 9641.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18290000 2932 3682 2796 5404 4462 4462 1 9606 Homo sapiens -0.010816020040010699 AWGPGLEGGVVGK Unmodified 1225.6455 0.64552182 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 0 5.75 2.77 1 2 1 55.88 55.921 2;3 7.5958E-05 16099 20230619_1888_Aki_TMTPro18x_K_F8 106.49 65.903 151350 140810 158890 148940 176980 211190 197180 192000 209920 198850 206740 191300 215040 176900 202870 198080 191780 209160 140130 128950 161040 150650 183020 208390 198020 197590 213010 200410 212550 194110 218560 184140 205870 199360 183720 198480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 457360000 2933 3484 2797 5405;5406;5407;5408 4463;4464;4465 4465 3 9606 Homo sapiens 0.04172488426070231 AWGPGLHGGIVGR Unmodified 1275.6836 0.68363867 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 4 0 1 45.176 45.22 3 1.9172E-06 11835 20230619_1883_Aki_TMTPro18x_K_F4 108.35 88.207 62995 51665 60487 70877 67700 68020 74790 76917 85873 83613 78027 79920 90951 66167 78816 89480 92684 94579 58231 47455 61822 69949 69898 69208 75337 78137 86579 84015 81002 80836 91779 70010 81181 89790 88558 89771 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93002000 2934 3299 2798 5409 4466 4466 1 9606 Homo sapiens 0.056824191313808115 AWHAFFTAAER Unmodified 1305.6255 0.62545508 1004 A0A0C4DGG1;B4DUI2;D3DQR0;Q9UKS6;E9PIY1;E9PJ75;E9PNM9;B4DV80 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes no 0 0 0 3 0 1 53.291 53.344 3 0.0019772 15654 20230619_1882_Aki_TMTPro18x_K_F3 69.451 62.722 75284 65254 64056 72797 72347 81489 82387 74647 89811 43866 45880 34403 45651 39182 54988 44198 41064 34597 69553 59799 66191 73020 74799 81593 82658 75941 89169 45796 49088 35596 47051 40518 54921 43842 39380 32986 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35686000 2935 1004 2799 5410 4467 4467 1 9606 Homo sapiens -0.015132625138903677 AWHGGCLALAELGR Unmodified 1509.7511 0.7510663 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;A0A804HI02;B4DE53;I6L959;Q9BTW9-5;A0A804HIC0;A0A804HL21 TBCD Tubulin-specific chaperone D yes no 0 0 0 2 0 1 52.209 52.248 3 5.4773E-07 15447 20230619_1881_Aki_TMTPro18x_K_F2 134.61 107.52 143240 112490 123980 132460 132740 145870 145350 145820 174150 137990 133140 141800 149320 131620 153120 157140 160860 145300 132270 103180 127730 132330 137600 146500 146690 148760 174080 140070 139350 143450 152130 137420 156080 156850 153730 138190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117220000 2936 1722 2800 5411 4468 4468 1 9606 Homo sapiens 0.01658081280015722 AWKPSSK Unmodified 802.43374 0.43373813 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;C9J2Z7;C9K073 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 1 4 0 1 40.75 40.792 3 0.034207 9863 20230619_1883_Aki_TMTPro18x_K_F4 71.501 55.61 261040 129880 313300 287270 418310 438130 360000 383240 373000 258160 317240 279780 319680 268260 304900 115410 328050 206650 241190 120400 315320 278890 424250 430020 366830 391760 376730 268490 328020 282500 325440 269180 310440 124280 312810 195750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271870000 2937 1676;2901 2801 5412 4469 4469 1 9606 Homo sapiens 0.024618615258077625 AWLSSQAAELER Unmodified 1359.6783 0.67827852 2830 D3DVC4;Q05BW3;A5PKT9 NES yes no 0 0 0 5 0 1 54.357 54.427 2 2.6515000000000003E-25 15588 20230619_1885_Aki_TMTPro18x_K_F5 215.79 183.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2938 2830 2802 5413 4470 4470 1 9606 Homo sapiens 0.012826507582758495 AWNAYPYCR Unmodified 1199.5182 0.51821282 3601;3771 P48739;P48739-2;P48739-3;B2R7P6;B3KYB6;B3KYB7;I3L3W1;I3L2X8;I3L4C0;I3L459;V9HWC5;Q00169;B4E1U1;I3L471;I3L4U7;I3L4H1 PITPNB;PITPNA;HEL-S-36 Phosphatidylinositol transfer protein beta isoform;Phosphatidylinositol transfer protein alpha isoform no no 0 0 0 3 0 1 47.937 48.016 2 5.7169E-06 13214 20230619_1882_Aki_TMTPro18x_K_F3 208.59 195.6 181450 169410 179190 146950 158630 198030 193880 201960 197750 104440 80728 71305 91377 71636 147660 100010 107430 71004 167910 154890 181750 151180 167490 196510 193560 203340 196320 109910 88907 74034 95590 75400 146660 98589 102930 67881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 333490000 2939 3601;3771 2803 5414 4471 4471 1 9606 Homo sapiens -0.07356555719775315 AWNDIKK Unmodified 873.47085 0.47085192 3558 Q59GY2;P36578;B4DMJ6;H3BM89;B4DMJ2;Q53G74;B4DFI6;H3BTP7 RPL4 60S ribosomal protein L4 yes no 0 0 1 1.5 0.5 1 1 45.707 45.748 3 0.037595 12439 20230619_1881_Aki_TMTPro18x_K_F2 68.224 24.088 1543300 1387900 1731900 1404600 2000900 1981000 1903400 1830300 1870400 1770900 1583000 1345400 1762900 1200800 1532400 1395000 1625900 1146900 1429300 1270700 1745400 1426300 2051600 1957200 1923900 1877900 1897000 1780000 1644100 1380400 1780600 1255100 1566400 1385700 1551500 1093700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 912640000 2940 3558 2804 5415;5416 4472 4472 1 9606 Homo sapiens 0.029055330715777927 AWQGAMDAGAASR Unmodified 1290.5775 0.57751861 3876 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 0 6.5 0.5 1 1 45.49 45.575 2 9.2966E-21 11544 20230619_1887_Aki_TMTPro18x_K_F7 223.08 169.01 38766 33958 40188 39118 41040 47726 46380 40338 50439 50119 48437 45553 50961 43256 45985 58755 56322 53480 35872 31127 40719 39203 42717 47442 46569 41991 51091 50005 49884 46401 51708 45514 47489 58460 53768 50862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73659000 2941 3876 2805 5417;5418 4473 4473 1 9606 Homo sapiens -0.05614704496224476 AWTVEQLR Unmodified 1001.5294 0.52942943 3774 Q00688;Q53GD8;G3V5F2 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 7 0.816 1 1 1 49.989 50.067 2 0.00015972 13570 20230619_1888_Aki_TMTPro18x_K_F8 172.03 122.67 1109900 976700 1112700 1040900 887780 1128900 1174300 1112200 1255400 1211800 1302800 1364600 1239300 1084200 1326400 1189600 1342800 1472700 1026800 894640 1126500 1047800 948690 1134500 1170200 1140300 1275900 1223900 1332500 1368300 1271100 1133400 1347400 1210100 1285600 1395300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1332500000 2942 3774 2806 5419;5420;5421 4474;4475 4475 2 9606 Homo sapiens 0.02872589646040069 AWVEEVRK Unmodified 1015.5451 0.5450795 1794 A0A8Q3SHT1;A0A8Q3SHX7;Q9BSC4;A0A8Q3SHW5;B4DS83;Q9BSC4-2;Q9BSC4-4 NOL10 Nucleolar protein 10 yes no 0 0 1 7 0 1 45.408 45.493 3 0.0034024 11511 20230619_1887_Aki_TMTPro18x_K_F7 98.933 58.875 136640 127770 133070 142370 154300 161330 151850 143590 175610 148540 157960 150130 164880 121680 151890 173020 170290 160610 126440 117050 135840 142850 158480 161360 153970 148080 176810 149960 163150 151460 167340 129240 155810 172280 162690 152720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91063000 2943 1794 2807 5422 4476 4476 1 9606 Homo sapiens 0.03792876163083747 AWVPAESAVEELMPR Acetyl (Protein N-term) 1725.8396 0.83960654 1526 G5EA29;H0YEL0;A0A8J9FN78;A0A8J9FJK1;A0A3B3IU42;O14893-5;A0A8J9FTZ9;H0YCF4;H0YDP6 GEMIN2 Gem-associated protein 2 yes no 1 0 0 2.5 0.5 1 1 67.805 67.831 2 2.6769E-07 21646 20230619_1882_Aki_TMTPro18x_K_F3 105.46 88.024 5267 2967.8 2259 864.94 583.08 2564.6 2452.5 2639.4 3201.6 2221.7 3130.6 6409.9 2967.5 2409.8 958.17 2367.9 1352.2 2518.6 4837.8 2706.7 2513.5 954.53 681.87 2466.5 2388.6 2678.7 3209 2392.5 3226.4 6166.5 2936.8 2610.9 937.26 2385.7 1279.1 2386.3 2 2 2 1 1 2 2 2 2 2 2 2 2 2 1 2 1 2 5975500 2944 1526 2808 5423;5424 4477;4478 4478 2 9606 Homo sapiens 0.005720320091768372 AWYPLGR Unmodified 861.44972 0.44972255 247;4269 Q8TCJ2;A0A024R3J7;P46977;A0A0C4DH80;E9PN73;E9PI32 STT3B;hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B;Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A no no 0 0 0 3.5 0.5 1 1 52.147 52.191 2 0.042839 14976 20230619_1883_Aki_TMTPro18x_K_F4 89.457 33.853 536530 446730 502780 518240 567360 693230 654390 620400 714440 587350 581500 588070 646230 522110 632970 647910 704950 665820 495910 409590 514800 519850 587130 685890 656370 637880 718890 595690 605910 594870 656840 547590 647900 650030 673520 632350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 412790000 2945 4269;247 2809 5425;5426 4479 4479 1 9606 Homo sapiens 0.013455677627234763 AYAALAALEK Unmodified 1019.5651 0.56514624 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;B4DDF3 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 4.5 3.5 1 1 60.052 60.07 3 0.00028886 18466 20230619_1880_Aki_TMTPro18x_K_F1 113.62 83.053 237750 212600 224880 225130 258830 322200 266130 267590 319140 103550 102480 62941 83642 68789 176490 97752 90903 58691 219870 194710 230080 227670 266750 317120 269390 272690 312780 112660 114450 66256 90393 72284 172670 95850 87579 56277 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 428070000 2946 3823 2810 5427;5428 4480;4481 4480 2 9606 Homo sapiens 0.056146271030456774 AYAALTDEESR Unmodified 1224.5622 0.5622457 1136 B3KQF0;A0A0S2Z5M1;Q9UGP8;B3KNE7;A0A0S2Z518;A6PVC9 SEC63 Translocation protein SEC63 homolog yes no 0 0 0 1 0 1 44.429 44.429 2 0.00027019 12043 20230619_1880_Aki_TMTPro18x_K_F1 113.93 88.367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2947 1136 2811 5429 4482 4482 1 9606 Homo sapiens -0.041052928124372556 AYAALTDEESRK Unmodified 1352.6572 0.65720872 1136 B3KQF0;A0A0S2Z5M1;Q9UGP8;B3KNE7;A0A0S2Z518;A6PVC9 SEC63 Translocation protein SEC63 homolog yes no 0 0 1 4 0 1 43.512 43.556 3 1.0288E-06 11101 20230619_1883_Aki_TMTPro18x_K_F4 145.41 125.07 135280 100040 109130 126390 133080 152190 134570 138890 173020 152330 182780 189360 192760 176720 138180 204600 227500 202730 124810 91845 113500 125790 136550 151610 136790 143160 174390 154430 187470 190200 194000 184090 146750 204860 216640 192670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112950000 2948 1136 2812 5430 4483 4483 1 9606 Homo sapiens -0.005013593412513728 AYADFYR Unmodified 904.40792 0.40791731 564 A0A024R9B7;P09669 COX6C Cytochrome c oxidase subunit 6C yes no 0 0 0 6.5 0.5 1 1 46.591 46.676 2 0.012083 12031 20230619_1887_Aki_TMTPro18x_K_F7 115.78 97.399 781820 665670 728560 851160 1092600 1347400 1129600 1172000 1538700 416980 413170 395170 453580 398740 556520 481780 535070 417540 722710 610870 751170 850450 1109000 1319900 1148100 1188700 1495900 463560 478820 403210 467270 415450 562430 479530 511340 397700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 448190000 2949 564 2813 5431;5432 4484;4485 4485 2 9606 Homo sapiens -0.04811032716474983 AYAEELASR Unmodified 1008.4876 0.4876242 3116 I6L975;Q3SXM5-2;Q3SXM5;H3BQI7;H3BT52 HSDL1 Inactive hydroxysteroid dehydrogenase-like protein 1 yes no 0 0 0 2.5 0.5 1 1 42.911 42.984 2 0.0026779 10774 20230619_1882_Aki_TMTPro18x_K_F3 104.2 76.943 70997 60268 66256 78316 80548 84210 88305 90178 103090 84223 92210 95498 96452 84399 91251 98533 107300 110490 65628 55317 67993 77674 82727 84843 89023 91551 103700 85806 95335 96080 98098 88177 93807 99437 102540 104810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271530000 2950 3116 2814 5433;5434 4486 4486 1 9606 Homo sapiens -0.016280108331443444 AYAGLGHAAR Unmodified 985.50936 0.50936269 827 A0A087WW06;Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes no 0 0 0 1 0 1 32.327 32.327 3 1.2615E-05 6906 20230619_1880_Aki_TMTPro18x_K_F1 117.81 73.416 34393 18598 38076 42422 59122 50627 41655 49424 41604 29358 48203 57065 37799 43093 47005 27635 56344 50571 31763 17241 38691 40941 59143 50531 43045 50032 42599 31589 48772 56160 39427 44055 48038 29375 53779 47811 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12104000 2951 827 2815 5435 4487 4487 1 9606 Homo sapiens 0.01602838706082821 AYANHMINNHVPR Oxidation (M) 1551.7365 0.73647887 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67;Q7Z3K3-3;B4DSK8;H0YCT3 POGZ Pogo transposable element with ZNF domain yes no 0 1 0 4.5 3.5 1 1 30.19 30.197 4 6.3758E-06 6032 20230619_1880_Aki_TMTPro18x_K_F1 132.17 110.41 55580 37480 60146 66754 82585 93205 67295 86314 92186 63926 84714 84936 75605 67109 78064 55974 81963 77056 51372 34567 61094 65296 83646 92012 69550 87987 92099 66483 86871 84650 77586 69227 79425 57693 78350 72982 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 41510000 2952 4164 2816 5436;5437 4488;4489;4490;4491 4489 2682 4 9606 Homo sapiens -0.017319908681201923 AYAPGGPAYQPVVEAFGTDILHK Unmodified 2400.2114 0.21139634 3832 Q13057;Q13057-2 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes no 0 0 0 1 0 1 62.668 62.668 3 1.6515E-19 19577 20230619_1880_Aki_TMTPro18x_K_F1 158.74 142.06 15044 10129 12377 16854 10897 14567 15244 16990 16791 16563 18098 22294 24476 18034 19506 21456 20288 25509 13875 9333.1 12804 16425 11579 14942 15172 17181 17073 16929 18814 22221 24521 18940 19977 21726 19440 24167 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26916000 2953 3832 2817 5438 4492 4492 1 9606 Homo sapiens 0.06729910178137288 AYAQGISR Unmodified 864.44537 0.44536545 651 O75390;A0A024RB75;B4DJV2;B3KTN4;A0A0C4DGI3;B7Z1E1;F8VPF9;F8VPA1;H0YH82;F8W1S4;F8VRI6;F8VR34 CS Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 7 0.816 1 1 1 35.474 35.512 2 0.00079946 7668 20230619_1888_Aki_TMTPro18x_K_F8 155.82 115.61 326080 185850 342710 330070 573800 658560 441950 520380 618160 72060 83257 68196 72509 66462 250690 52214 128070 56460 301070 171540 350200 325450 574680 637280 458360 528660 596800 97843 110380 69766 83037 67853 243870 53597 123220 53843 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 383220000 2954 651 2818 5439;5440;5441 4493;4494 4494 2 9606 Homo sapiens 0.007720585491483689 AYAQQLADWAR Unmodified 1291.6309 0.63093439 1004 A0A0C4DGG1;B4DUI2;D3DQR0;Q9UKS6;E9PIY1;E9PJ75;E9PNM9;B4DV80;E9PJ33 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes no 0 0 0 1 0 1 56.035 56.035 2 0.0012759 16856 20230619_1880_Aki_TMTPro18x_K_F1 97.472 66.099 31452 31700 31681 32519 31005 35953 33105 34856 39445 33553 32461 28296 35286 30346 39735 34762 34268 32077 29127 29014 32159 32838 32335 36081 33462 35642 39541 33837 33746 29057 36134 31471 39996 34732 32825 30503 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27086000 2955 1004 2819 5442 4495 4495 1 9606 Homo sapiens -0.0032158372207504726 AYAYLFK Acetyl (Protein N-term) 916.46945 0.46945494 473 A0A024R7V6;P61019;P61019-2;A0A0A1HAW1;E9PKL7 RAB2;RAB2A Ras-related protein Rab-2A yes no 1 0 0 1.5 0.5 1 1 64.842 64.846 2 0.023322 20458 20230619_1880_Aki_TMTPro18x_K_F1 47.907 41.542 352250 308280 299960 312800 340530 422560 376390 367270 465790 204790 181900 185900 218850 175570 254970 203290 202850 208270 325460 282270 309830 317100 352090 417660 379910 374650 457380 215660 201780 189360 223920 183000 255470 204300 194630 197740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290440000 2956 473 2820 5443;5444 4496;4497 4496 2 9606 Homo sapiens 0.007878989828100202 AYCPQIGCSHTDIR Unmodified 1676.7399 0.73990927 578 E5RFJ1;A0A024R9J6;Q96MF7 NSMCE2;C8orf36 E3 SUMO-protein ligase NSE2 yes no 0 0 0 7 0 1 39.482 39.547 3 6.0084E-09 9057 20230619_1887_Aki_TMTPro18x_K_F7 151.3 138.34 18033 12249 16270 15936 17819 18560 16284 22539 25970 22661 23313 23322 26656 22673 20803 23607 25219 25008 16644 11253 16692 15832 18361 18659 16823 22728 25800 22919 24181 23625 26825 23462 21515 23781 24086 23739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26558000 2957 578 2821 5445 4498 4498 1 9606 Homo sapiens -0.0713910887639031 AYCVLVTGPNMGGK Unmodified 1465.7058 0.70575559 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;A0A8V8TPJ4 MSH6 DNA mismatch repair protein Msh6 yes no 0 0 0 3 0 1 56.005 56.042 3 4.9283E-12 16772 20230619_1882_Aki_TMTPro18x_K_F3 153.74 139.39 58510 48898 53748 63025 52325 59409 55799 55123 72792 64995 64187 58405 72070 54508 69705 68110 62898 63132 54073 44880 55027 62423 54610 60249 56590 56894 72848 64985 66573 59483 73137 57108 70537 67958 60248 60015 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169330000 2958 1853 2822 5446 4499 4499 1 9606 Homo sapiens -0.008469052973623548 AYDATHLVK Unmodified 1016.5291 0.52909508 1178 X6RA14;U3KQT1;A0A140VJJ2;P10768;H7BZT7 ESD S-formylglutathione hydrolase yes no 0 0 0 7 0.816 1 1 1 43.435 43.496 3 0.00055504 10699 20230619_1887_Aki_TMTPro18x_K_F7 112.75 73.73 665390 419490 575520 587390 516530 603270 609280 546350 666070 655350 850390 868600 758870 662350 718440 804990 889950 891730 613700 385820 591310 579500 544190 607340 610890 565430 682230 662930 859910 865210 775680 697440 741210 811240 849850 846040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 749210000 2959 1178 2823 5447;5448;5449 4500;4501 4500 2 9606 Homo sapiens 0.021491699262014663 AYDIAGSTK Unmodified 924.45526 0.45526144 3433 P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 6 0 1 44.352 44.444 2 2.4506E-10 11431 20230619_1886_Aki_TMTPro18x_K_F6 157.91 61.658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2960 3433 2824 5450 4502 4502 1 9606 Homo sapiens -0.009987982361394643 AYDIYSR Unmodified 886.41848 0.418482 3952 Q16740;M0QYV5 CLPP ATP-dependent Clp protease proteolytic subunit, mitochondrial;ATP-dependent Clp protease proteolytic subunit yes no 0 0 0 4.5 0.5 1 1 42.352 42.416 2 0.011051 10517 20230619_1885_Aki_TMTPro18x_K_F5 117.16 35.779 118580 106150 118160 122300 122780 131430 149040 135640 157980 152140 175020 157910 193780 141800 129150 192960 187530 158440 109710 97297 120180 122350 127820 132350 149000 138750 161090 153050 179390 159660 193990 149550 136030 190970 178660 150960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127630000 2961 3952 2825 5451;5452 4503 4503 1 9606 Homo sapiens -0.029270500620441453 AYDLAGSCR Unmodified 1011.4444 0.44437918 1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 0 0 0 5 0 1 39.593 39.683 2 0.00011562 9390 20230619_1885_Aki_TMTPro18x_K_F5 153.08 109.96 41510 30612 45364 41344 47672 50422 44795 49991 51960 41740 50627 49173 48427 43376 46400 44845 60569 49504 38389 28124 45765 40998 49237 50282 45585 50861 52439 42865 51901 49402 49430 45005 47985 45315 57739 47011 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23156000 2962 1843 2826 5453 4504 4504 1 9606 Homo sapiens -0.06088523882056052 AYDSHSLK Unmodified 919.43995 0.43994572 4606 Q9NVP1;Q4ZG72;Q8N254 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 0 0 6 0 1 36.652 36.72 3 0.00022667 8262 20230619_1886_Aki_TMTPro18x_K_F6 144.09 78.837 70161 35317 78108 88225 115840 116290 93901 108280 105880 62833 78912 68483 77889 57857 90548 41990 91525 62958 64780 32812 79297 84994 116640 115180 96335 109910 105990 66170 82159 68928 80079 59266 91616 43794 87363 59680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202490000 2963 4606 2827 5454 4505 4505 1 9606 Homo sapiens -0.022996650333197977 AYEDQTKPVLEYYQK Unmodified 1873.9098 0.90979459 4173 Q7Z4Y4;Q9UIJ7;Q7Z531;B3KWD9;Q9UIJ7-2;Q9UIJ7-3 AK3 GTP:AMP phosphotransferase AK3, mitochondrial yes no 0 0 1 6.5 0.5 1 1 52.32 52.396 3 7.9456E-14 14924 20230619_1886_Aki_TMTPro18x_K_F6 174.62 114.17 216220 184710 219360 236220 259870 287270 311380 307130 284600 289990 320590 323850 296050 266730 325760 282470 296390 321430 200010 169500 223360 235010 267940 287010 310110 311880 292870 294900 326320 325250 304370 277830 328880 285950 284040 304790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 128630000 2964 4173 2828 5455;5456 4506;4507;4508 4506 3 9606 Homo sapiens 0.007796088786790278 AYEFAER Unmodified 884.40283 0.40283194 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;A0A087WX41;P53675-2;P53675 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 0 2.5 0.5 1 1 41.66 41.73 2 0.0057599 10320 20230619_1882_Aki_TMTPro18x_K_F3 138.33 58.736 715110 561120 621670 682460 701920 745760 767850 729540 850550 919660 929470 925570 1011200 791810 787930 1080900 1049500 946380 660360 514820 640860 680110 724520 749110 772900 751560 865480 919290 953230 935070 1018600 836570 821170 1073100 1000900 900680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1257300000 2965 826 2829 5457;5458 4509;4510 4510 2 9606 Homo sapiens -0.043993365790925054 AYEKPPEK Unmodified 960.49165 0.49164694 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 1 5.5 0.5 1 1 38.651 38.739 3 0.080881 9086 20230619_1886_Aki_TMTPro18x_K_F6 48.283 24.678 41205 29160 48746 51701 65548 74757 57097 64021 62904 53305 76599 92830 67129 63988 64192 43466 78048 77282 38126 26887 49166 50614 66529 73545 58270 65844 64243 55643 77640 91358 68718 65856 65971 45984 74536 73047 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 384770000 2966 2621 2830 5459;5460 4511 4511 1 9606 Homo sapiens 0.00982078660570096 AYEYVECPIR Unmodified 1298.5965 0.59652272 700 P53701;A0A024RBY9;Q68D50 HCCS;DKFZp779I1858 Cytochrome c-type heme lyase yes no 0 0 0 4 0 1 48.944 48.982 2 0.00048258 13516 20230619_1883_Aki_TMTPro18x_K_F4 123.35 93.611 57939 42653 50159 53490 46377 65440 60174 54763 65130 71002 69114 77111 81778 75004 66600 104940 88728 104600 53482 39156 51586 53276 48972 64984 60020 57131 66272 71085 71326 77970 82405 78995 69432 104820 84790 99293 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81181000 2967 700 2831 5461 4512 4512 1 9606 Homo sapiens -0.04083167925205089 AYFAVFDGHGGVDAAR Unmodified 1651.7743 0.77430417 1894 A0M8Q2;Q6IPC0;P49593;B5MCT7;P49593-2;B3KX06;Q0VGL7;A8MX49;C9J2F3 PPM1F Protein phosphatase 1F yes no 0 0 0 6.5 0.5 1 1 53.625 53.697 3 3.7698E-08 15211 20230619_1887_Aki_TMTPro18x_K_F7 129.01 105.17 70590 60277 68584 85034 75701 80143 82950 83685 100940 98979 95873 93689 103750 86891 94032 110880 112990 108590 65275 55374 70044 83739 78260 81487 83767 85666 101640 99058 98932 95147 105190 91137 96926 110860 107890 103180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142090000 2968 1894 2832 5462;5463 4513 4513 1 9606 Homo sapiens -0.025512014016385365 AYFETEK Unmodified 886.40725 0.40724861 3455 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6;H3BSV8 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 0 0 0 4 0.816 1 1 1 46.627 46.693 2 0.0025638 12440 20230619_1883_Aki_TMTPro18x_K_F4 160.91 50.551 459770 354060 380220 455060 496250 545740 480280 468990 636200 596650 611000 646640 739950 596910 532010 824340 569490 733160 424380 325050 395060 452250 506310 543210 489860 487850 638470 597940 633680 652810 740990 629370 548420 818710 545650 696730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 375370000 2969 3455 2833 5464;5465;5466 4514;4515;4516 4515 3 9606 Homo sapiens -0.04049872156190304 AYFETERK Unmodified 1042.5084 0.50835964 2572 B4DQM6;Q8IYD1 GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 1 6 0 1 39.988 40.076 3 0.084751 9571 20230619_1886_Aki_TMTPro18x_K_F6 44.82 14.566 50148 39129 46124 53755 63869 64971 67586 70211 70632 51396 63444 65917 54446 48801 64400 57444 64829 58338 46326 35947 47508 53220 64990 64959 68005 70849 71414 53398 65083 65693 56348 51335 65294 57668 61978 55424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11280000 2970 2572 2834 5467 4517 4517 1 9606 Homo sapiens -0.011194204534831442 AYGDRIER Unmodified 978.48829 0.4882929 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A7P0T917;B4DU71;B4DHT9 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 1 3.5 0.5 1 1 30.503 30.583 3 0.0011184 5832 20230619_1882_Aki_TMTPro18x_K_F3 113.94 70.86 136850 148460 134620 103310 234460 133040 146580 178280 140110 125310 153970 128810 123390 106230 153510 137430 183530 123440 126780 135480 138060 108780 232250 133830 152820 177410 143710 129490 155880 130030 128380 111940 157110 136890 174900 117620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92891000 2971 3452 2835 5468;5469 4518;4519 4518 2 9606 Homo sapiens -0.001811713934216641 AYGELPEHAK Unmodified 1113.5455 0.54547343 3595 P47813;A6NJH9;O14602;X6RAC9 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 0 0 0 5 1.41 1 1 1 1 1 39.946 40.014 3 0.00013344 9565 20230619_1883_Aki_TMTPro18x_K_F4 112.15 53.449 800920 597860 750610 798190 836420 869010 845740 785820 932050 991400 1079700 1172600 1132500 900110 963500 1212900 1242200 1132600 739790 549170 768170 790380 861970 871570 854980 814370 950940 996260 1103600 1172900 1145900 953990 999440 1208600 1185000 1077000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1354600000 2972 3595 2836 5470;5471;5472;5473;5474 4520;4521;4522 4521 3 9606 Homo sapiens -0.006757489077244827 AYGENIGYSEK Unmodified 1229.5564 0.55643205 1923 Q6LEU2;A3KLL5;P05026-2;P05026;B7Z9S8;A6NGH2;Q58I20;A0A8I5KX89 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 0 4.5 0.5 1 1 45.611 45.671 2 4.3875E-17 12004 20230619_1883_Aki_TMTPro18x_K_F4 236.95 164.41 92050 74098 75600 109430 112800 142630 128240 129920 165390 130150 139080 147950 145130 124860 124760 175070 160380 162580 84981 68122 78985 107930 114880 141310 129460 133580 165220 132140 144230 148680 147030 132170 129470 174260 153120 154540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73530000 2973 1923 2837 5475;5476 4523;4524 4523 2 9606 Homo sapiens -0.04916391324104552 AYGFSCDGEGVLK Unmodified 1401.6235 0.62346575 4404 Q99622;U3KQ85 C12orf57 Protein C10 yes no 0 0 0 5.5 0.5 1 1 54.593 54.665 3 6.6708E-08 15921 20230619_1886_Aki_TMTPro18x_K_F6 153.34 129.74 170650 127980 156520 158340 140490 181570 192810 187130 232540 185070 154910 161680 194370 158520 168930 211730 183300 197860 157610 117460 160010 157750 148880 181890 192520 190710 231480 186550 164380 165140 195920 166480 173260 211000 175350 188020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 323750000 2974 4404 2838 5477;5478 4525;4526 4526 2 9606 Homo sapiens -0.06128104104641352 AYGGSMCAK Oxidation (M) 959.38409 0.3840871 1905 P49207;A1LUY1;Q5MK14 RPL34 60S ribosomal protein L34 yes no 0 1 0 7.5 0.5 1 1 35.213 35.243 2 0.0080071 7390 20230619_1887_Aki_TMTPro18x_K_F7 84.227 69.445 102150 58128 142380 117230 200260 236960 155470 198090 157140 82494 66415 69742 119910 73817 92214 56911 155250 104320 94581 53759 142030 115020 202230 229400 159490 201690 156330 89301 74802 71541 119300 75360 97491 60224 147580 98771 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 95101000 2975 1905 2839 5479;5480 4527;4528 4527 1223 2 9606 Homo sapiens -0.09722957536803278 AYGGSMCAK Unmodified 943.38917 0.38917248 1905 P49207;A1LUY1;Q5MK14 RPL34 60S ribosomal protein L34 yes no 0 0 0 8 0 2 40.351 40.344 2;3 0.00069143 9620 20230619_1888_Aki_TMTPro18x_K_F8 106.36 98.131 242290 141200 295400 278110 360580 452370 312350 364390 368140 224300 208630 201850 306540 208240 219650 200050 340130 271270 224040 130520 296600 271620 368450 441700 319550 374280 365340 233840 225750 206230 305470 214590 231360 205210 323790 257150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 279360000 2976 1905 2839 5481;5482 4529;4530 4530 2 9606 Homo sapiens -0.08478653674183079 AYGNLGNTHYLLGNFTEATTFHK Unmodified 2568.2397 0.23973636 933 A0A0A0MRC4;Q86YR5;A0A0A0MSK4;Q86YR5-4;Q86YR5-3;A0A087WVF5 GPSM1 G-protein-signaling modulator 1 yes no 0 0 0 3 0 1 58.623 58.654 4 1.8198E-44 17891 20230619_1882_Aki_TMTPro18x_K_F3 239.56 222.94 41221 31895 45360 41349 30540 34803 38364 31942 33524 45722 47688 47138 55670 43003 43941 53089 53320 59061 38134 29284 45482 40906 33083 35629 38114 33239 35044 45494 48603 47656 55976 45062 45458 53491 50965 56012 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16770000 2977 933 2840 5483 4531 4531 1 9606 Homo sapiens 0.018346080874835025 AYGPGIEPTGNMVK Oxidation (M) 1448.697 0.69696505 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98 FLNA Filamin-A yes no 0 1 0 6.5 0.5 1 1 46.559 46.645 3 1.2327E-05 12392 20230619_1886_Aki_TMTPro18x_K_F6 114.79 92.253 74575 57965 73859 76308 105390 96656 93002 95445 105110 93369 108970 104860 102870 86479 97286 100610 102220 110290 68930 53228 75556 75820 106490 96204 94864 97507 106520 94830 111330 105340 104900 90572 99320 101410 97815 104630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 321910000 2978 3484 2841 5484;5485 4532 4532 2138 1 9606 Homo sapiens -0.009435556622065633 AYGPGIEPTGNMVK Unmodified 1432.7021 0.70205043 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98 FLNA Filamin-A yes no 0 0 0 7 0 1 50.893 50.971 2 2.7083E-06 14016 20230619_1887_Aki_TMTPro18x_K_F7 161.17 140.84 37687 28570 30388 32307 34796 49450 38377 44862 44220 42451 40151 47685 50311 45240 46533 48459 45603 53596 34776 26198 31571 32549 36004 48566 38677 46044 44576 43196 41890 48070 50860 46912 47345 48931 43697 50822 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46342000 2979 3484 2841 5486 4533 4533 1 9606 Homo sapiens 0.0030074820042500505 AYGQALAK Unmodified 820.4443 0.44430282 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8;B4DVU1 HEL107;TKT Transketolase yes no 0 0 0 4.5 3.5 1 1 43.502 43.507 2 0.0018452 11635 20230619_1880_Aki_TMTPro18x_K_F1 148.07 92.351 268200 144560 241510 274680 273100 371060 245900 266810 933420 340640 371240 422830 434660 402210 331910 301920 574190 482820 247260 133610 248270 267600 282620 365100 270100 281710 887500 344510 409990 424360 437520 410390 352420 315290 546400 457000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162410000 2980 3523 2842 5487;5488 4534;4535 4534 2 9606 Homo sapiens 0.026898441802245543 AYGTNYIETLR Unmodified 1299.6459 0.64591575 4755 Q9Y6A4;B4DN94 CFAP20 Cilia- and flagella-associated protein 20 yes no 0 0 0 7.5 0.5 1 1 51.397 51.474 2 7.3089E-12 14247 20230619_1887_Aki_TMTPro18x_K_F7 200.68 160.33 119200 101470 112980 134860 104200 123810 141680 143380 141700 143230 153040 146350 156630 134880 134770 153390 161640 162070 110200 93154 115320 133290 109970 126440 140700 145140 144800 144820 156600 148090 158730 140500 139010 154290 154400 153850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 90020000 2981 4755 2843 5489;5490 4536;4537 4536 2 9606 Homo sapiens 0.008078633552713654 AYGVCFVDTSLGK Unmodified 1415.6755 0.67550132 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 1 0 1 60.288 60.288 3 1.8549E-05 18629 20230619_1880_Aki_TMTPro18x_K_F1 94.191 71.717 91072 75212 95271 94817 69866 90161 85014 89686 101660 118210 103300 106650 127140 98868 99655 129460 125680 125890 84249 69018 96050 94100 75102 91490 85427 92415 102820 117560 106950 108520 127660 103920 103420 129310 120000 119610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95537000 2982 1853 2844 5491 4538 4538 1 9606 Homo sapiens -0.015709406909081736 AYHAGLK Unmodified 758.40752 0.40752338 528 A5YM55;A0A024R8M9;B7Z8Y7;O94762-4;O94762;A0A024R8S8;B3KQK2;J3KTQ2;O94762-2;O94762-3 RECQL5 ATP-dependent DNA helicase Q5 yes no 0 0 0 3.67 3.09 1 1 1 36.871 36.886 3 0.019308 8236 20230619_1888_Aki_TMTPro18x_K_F8 77.944 27.904 1411300 594050 1793300 1590800 2331400 2407500 2164200 2264000 1866900 616380 807430 582810 803430 654450 909270 390040 1100300 614180 1304000 553360 1796800 1533800 2370900 2366900 2182400 2277800 1872700 712070 877500 597400 825710 659370 930080 410610 1047600 582760 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 666020000 2983 528 2845 5492;5493;5494 4539;4540;4541 4541 3 9606 Homo sapiens 0.01865592354340606 AYHEQLSVAEITNACFEPANQMVK Oxidation (M) 2765.2789 0.27890034 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;C9JDS9;P68366-2;P68366;Q71U36;Q71U36-2;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;P0DPH7-2;Q6PEY2 TUBA1B;TUBA4A;TUBA1A;TUBA2;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain no no 0 1 0 6 1.26 1 1 2 5 5 1 59.017 59.075 3;4;5 1.3527E-26 16374 20230619_1886_Aki_TMTPro18x_K_F6 184.29 171.97 407970 213010 358900 417110 362340 316880 370720 353790 371050 460710 486910 482860 503980 430590 426080 570250 513420 554230 376010 196970 368910 402810 375720 328840 373520 362000 383040 460330 494790 487600 510160 453240 440140 569450 490680 526430 10 8 10 10 10 10 10 10 10 10 10 10 10 10 9 10 10 10 28722000000 2984 2408;3747;4144 2846 5495;5496;5497;5498;5499;5500;5501;5502;5503;5504;5505;5506;5507;5508;5509 4542;4543;4544;4545;4546;4547;4548;4549;4550;4551;4552 4543 1485 11 9606 Homo sapiens -0.03312795735473628 AYHEQLSVAEITNACFEPANQMVK Unmodified 2749.284 0.28398571 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;C9JDS9;P68366-2;P68366;Q71U36;Q71U36-2;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;P0DPH7-2;Q6PEY2 TUBA1B;TUBA4A;TUBA1A;TUBA2;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain no no 0 0 0 6.77 0.799 1 3 7 2 64.286 64.327 3;4 4.6349E-44 17634 20230619_1886_Aki_TMTPro18x_K_F6 222.91 209.59 661260 322040 598670 664050 534440 637210 624340 627430 591840 871200 773130 780190 905720 805150 691190 885980 941650 1043500 609430 298140 612650 641530 562790 645510 623530 648090 613440 864130 790420 796780 910360 834110 721530 897210 899220 989050 12 8 11 13 10 13 10 12 12 12 13 12 13 11 13 13 12 13 30354000000 2985 2408;3747;4144 2846 5510;5511;5512;5513;5514;5515;5516;5517;5518;5519;5520;5521;5522 4553;4554;4555;4556;4557;4558;4559;4560;4561;4562;4563;4564;4565 4554 13 9606 Homo sapiens -0.020684918728875346 AYHLQDDGTQTVR Unmodified 1502.7114 0.71136956 1755 A0A8I5KWA3;A0A8I5KRL2;A0A8I5KWJ1;A0A8I5KQC1;A0A8I5KVT1;A0A8I5KY03;A0A8I5KUG7;A0A8I5KYU6;A0A8I5KTC7;A0A8I5KU57;A0A8I5KXM1;A0A8I5KXV7;A0A8I5KUW0;A0A8I5KYX4;V9HWD3;Q96DZ1-2;Q96DZ1-3;Q96DZ1 HEL117;ERLEC1 Endoplasmic reticulum lectin 1 yes no 0 0 0 3 0 1 36.124 36.178 3 3.9828E-11 8032 20230619_1882_Aki_TMTPro18x_K_F3 183.37 154.67 40107 26894 42282 40626 48146 46757 48986 40827 53618 36493 47280 34906 35395 30819 43964 33721 44301 32309 37061 24751 42843 39967 49510 46681 49467 42030 54028 37107 48220 35417 36916 32076 44512 33801 42301 30746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42948000 2986 1755 2847 5523 4566 4566 1 9606 Homo sapiens -0.019877671897120308 AYIASAGADALAK Unmodified 1220.6401 0.6401021 1887 A0AV58;Q13033-2;Q13033 STRN3 Striatin-3 yes no 0 0 0 8 0 1 52.973 53.048 2 0.013104 14864 20230619_1888_Aki_TMTPro18x_K_F8 92.239 55.545 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2987 1887 2848 5524 4567 4567 1 9606 Homo sapiens 0.038607648436027375 AYIDSFR Unmodified 870.42357 0.42356738 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 47.326 47.41 2 0.0051616 12410 20230619_1887_Aki_TMTPro18x_K_F7 143.02 18.646 883890 609730 713900 820530 678490 780310 859610 865970 959590 994410 1138500 1092600 1128400 967030 961420 1294500 1217800 1227100 815210 560310 739530 810720 713130 793880 859510 882300 978910 1000900 1158800 1101300 1144200 1018800 996590 1290800 1162700 1166100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 812600000 2988 1207 2849 5525;5526 4568;4569 4569 2 9606 Homo sapiens -0.016827461994353143 AYILNLVK Unmodified 932.5695 0.56950333 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 4.67 0.471 1 2 61.796 61.829 2;3 0.00054784 19087 20230619_1883_Aki_TMTPro18x_K_F4 134.66 83.96 638270 701890 546590 500760 929110 1532300 796980 794100 1516400 92966 46936 117620 135500 96599 204610 113040 118810 136720 590760 640620 569080 535900 937090 1453200 831720 842720 1441000 136040 121660 117960 139370 101320 201590 114940 114630 129540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1290100000 2989 3622 2850 5527;5528;5529 4570;4571 4570 2 9606 Homo sapiens 0.10052136316619453 AYINKVEELK Unmodified 1205.6656 0.66558856 3396 P07108;B8ZWD1;A0A024RAF2;B8ZWD9;P07108-3;P07108-2;P07108-4;P07108-5;B8ZWD8 DBI Acyl-CoA-binding protein yes no 0 0 1 7.5 0.5 1 1 53.861 53.932 3 0.00020867 15260 20230619_1888_Aki_TMTPro18x_K_F8 120.99 88.383 165360 202950 233890 186910 235230 138530 214410 178710 108420 202510 212490 71109 82315 57366 271310 55668 75450 52274 153910 185490 231450 189790 242220 145210 214320 180520 120910 199090 206850 77920 96736 59738 260570 56489 73923 49771 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 534060000 2990 3396 2851 5530;5531 4572;4573;4574 4574 3 9606 Homo sapiens 0.07098239366041525 AYIQENLELVEK Unmodified 1447.7559 0.75586013 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKS0;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 5 0 1 59.629 59.683 2 3.1207E-18 17763 20230619_1885_Aki_TMTPro18x_K_F5 231.7 163.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2991 2973 2852 5532 4575 4575 1 9606 Homo sapiens 0.0498924390378761 AYLDQTVVPILLQGLAVLAK Unmodified 2124.2558 0.25582734 4479 Q9C005;B4DIS3 DPY30;LOC84661 Protein dpy-30 homolog yes no 0 0 0 7 0 1 69.789 69.807 3 0.010911 22005 20230619_1887_Aki_TMTPro18x_K_F7 55.437 35.598 1339.5 918.49 0 1876.2 726.74 0 690.32 1720.2 2066.5 1042.1 1144.3 1594 1074.5 1603.9 0 1532.2 897.23 1189.6 1227.1 848.85 0 1788.4 696.63 0 740.4 1619.8 1986.8 1106.5 1214.7 1593.2 1053.8 1645.8 0 1517.5 851.82 1132.4 1 1 0 1 1 0 1 1 1 1 1 1 1 1 0 1 1 1 1114100 2992 4479 2853 5533 4576 4576 1 9606 Homo sapiens 0.23866966062360007 AYLEPEHTK Unmodified 1086.5346 0.53457439 2514 B4DKJ9;Q70IA6-2;Q70IA6;Q70IA6-3 MOB2 MOB kinase activator 2 yes no 0 0 0 3.5 0.5 1 1 39.165 39.213 3 4.5135E-05 9224 20230619_1883_Aki_TMTPro18x_K_F4 145.9 99.932 56367 45697 57394 53347 68931 67423 62688 56194 70400 64289 75349 67405 67902 56365 68068 68215 73117 64849 52125 41905 58353 53445 70452 66888 63808 58414 71461 64656 76700 67945 69535 59132 69490 68179 69851 61660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75102000 2993 2514 2854 5534;5535 4577 4577 1 9606 Homo sapiens -0.005231512820046191 AYLESEVAISEELVQK Unmodified 1806.9251 0.92511031 4571 Q9NQC3;Q9NQC3-2;Q9NQC3-5;Q9NQC3-4;Q6IPN0;Q3LIF4;Q9NQC3-6;A0A0U1RQR6;Q53SY1;A6XGP7;H7C106;D6W5C2;Q9NQC3-3 RTN4;Nbla00271;NOGOC Reticulon-4;Reticulon yes no 0 0 0 3.5 0.5 1 1 63.21 63.24 3 3.4201E-06 19709 20230619_1883_Aki_TMTPro18x_K_F4 113.76 94.682 17225 15478 16108 18694 17073 21894 22149 21651 21423 17051 21562 26818 24477 19611 24295 24662 23219 26760 15929 14193 16494 18656 17813 21881 22012 22019 21851 17775 22288 26535 24870 20733 24652 24819 22251 25382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73194000 2994 4571 2855 5536;5537 4578;4579 4579 2 9606 Homo sapiens 0.053924756758533476 AYPHVFTK Unmodified 961.50215 0.50215205 2688 B7Z4A1;O14949 UQCRQ Cytochrome b-c1 complex subunit 8 yes no 0 0 0 2.5 0.5 1 1 44.273 44.351 3 0.00056765 11550 20230619_1882_Aki_TMTPro18x_K_F3 133.55 100.43 348360 274220 335390 412370 427040 486010 445430 470360 602020 358590 419540 399900 444020 366400 432840 492320 504900 507340 321950 252180 343690 405780 437200 485230 452690 478550 596320 370150 440000 403470 451980 385780 444640 493340 482410 481710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 514620000 2995 2688 2856 5538;5539 4580;4581 4581 2 9606 Homo sapiens 0.019861061056644758 AYPPTSMSR Unmodified 1008.4699 0.46986564 2564 B4DP80;Q8NCW5;A0A7P0TAG8;A0A7P0T9Y2;Q5T3I4;Q6PGN4;Q5T3I3;A0A7P0Z426 APOA1BP NAD(P)H-hydrate epimerase yes no 0 0 0 8 0 1 38.404 38.39 2 0.005636 8832 20230619_1888_Aki_TMTPro18x_K_F8 85.38 43.878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2996 2564 2857 5540 4582 4582 1 9606 Homo sapiens -0.03403049359644683 AYPYMEGEPEDDVYLK Unmodified 1917.8342 0.83424639 1899 Q9BYD6;A0PJ79;H0Y8N7 MRPL1 39S ribosomal protein L1, mitochondrial yes no 0 0 0 2.5 0.5 1 1 60.133 60.162 3 0.0005259 18456 20230619_1882_Aki_TMTPro18x_K_F3 77.42 67.321 45759 40321 43167 46281 41537 53860 49620 51111 52719 60960 60084 59827 66931 63333 59296 72396 63212 70941 42313 36957 44073 46357 43556 53813 49676 52656 53872 61043 61600 60925 67771 65666 60723 72490 60496 67367 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13084000 2997 1899 2858 5541;5542 4583;4584 4584 2 9606 Homo sapiens -0.08795736363936157 AYPYSQTGDDK Unmodified 1243.5357 0.5356966 2225 B2R5U7;Q03701 CEBPZ CCAAT/enhancer-binding protein zeta yes no 0 0 0 3.5 0.5 1 1 42.394 42.449 2 0.001546 10598 20230619_1883_Aki_TMTPro18x_K_F4 96.331 61.523 17748 12552 16100 23809 19244 27637 21587 22288 32094 24542 31502 37044 34790 30804 24697 30892 42024 38177 16385 11585 16596 23131 19877 27496 21947 23208 32043 25085 32512 36811 34950 31981 26277 31434 40014 36198 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46176000 2998 2225 2859 5543;5544 4585 4585 1 9606 Homo sapiens -0.07632981703750374 AYQFAGR Unmodified 811.39769 0.39768698 2045 Q53HG5;A8K4K9;Q15006 EMC2 ER membrane protein complex subunit 2 yes no 0 0 0 1 0 1 39.246 39.246 2 0.016263 9743 20230619_1880_Aki_TMTPro18x_K_F1 98.415 69.886 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2999 2045 2860 5545 4586 4586 1 9606 Homo sapiens -0.015555956510524993 AYQHGGVTGLSQY Unmodified 1379.647 0.64697839 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A8A5YP40;B3KY55;A0A8A5YNF9;A0A8A5YPS5;A0A059XAM1;A0A059XBJ6;A0A059XG73 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 7 0 1 44.478 44.561 2 3.1526E-07 11138 20230619_1887_Aki_TMTPro18x_K_F7 147.75 135.13 28940 20694 26443 32104 25287 30625 29952 32196 26585 30536 30043 31068 34601 25286 28134 37019 36273 33775 26720 19046 27089 31446 26496 31094 29842 32739 27438 30945 30868 31334 34841 26909 29219 36802 34610 32123 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55096000 3000 462 2861 5546 4587 4587 1 9606 Homo sapiens -0.0276592227578476 AYSEVDGQVFQGR Unmodified 1454.679 0.6790068 4737 Q9Y4C8 RBM19 Probable RNA-binding protein 19 yes yes 0 0 0 4 0 1 48.124 48.164 2 1.9439E-05 13119 20230619_1883_Aki_TMTPro18x_K_F4 152.54 127.75 48611 36330 42722 51098 44026 55021 51207 55817 55062 64490 54511 63077 71277 50912 54104 81833 71661 72078 44880 33391 43969 50420 45883 55327 51349 57181 55938 64635 56736 63690 71354 54585 56441 81099 68398 68562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55643000 3001 4737 2862 5547 4588 4588 1 9606 Homo sapiens -0.03014554592687091 AYSLSEPPRENR Unmodified 1417.695 0.69499121 1392 A0A2X0U2G7;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 yes no 0 0 1 5 0 1 36.228 36.32 3 0.0018312 8017 20230619_1885_Aki_TMTPro18x_K_F5 84.053 68.163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3002 1392 2863 5548 4589 4589 1 9606 Homo sapiens 0.0028515164424334216 AYSPEDLEER Unmodified 1207.5357 0.5356966 4286 Q8WXD5 GEMIN6 Gem-associated protein 6 yes yes 0 0 0 1 0 1 43.974 43.974 2 2.7113E-06 11857 20230619_1880_Aki_TMTPro18x_K_F1 169.44 115.23 39841 33545 36572 34866 41786 46154 41483 39679 41975 44386 51809 46040 50842 36903 50023 47460 49682 52841 36821 30725 37491 35270 42985 45681 41870 41106 43134 44650 52620 46380 51828 38966 50849 47830 47561 50120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39274000 3003 4286 2864 5549 4590 4590 1 9606 Homo sapiens -0.05976981703770434 AYSSFGGGR Unmodified 900.40898 0.40897995 3913;3914 Q15056;Q75MU1;B4DMV6;Q75MU2;A0A7I2V4V9;Q15056-2;A0A7I2V385 EIF4H;WBSCR1 Eukaryotic translation initiation factor 4H no no 0 0 0 7.5 0.5 1 1 38.189 38.213 2 7.3136E-06 8754 20230619_1888_Aki_TMTPro18x_K_F8 179.21 140.39 283900 189840 243460 263920 293510 317230 277350 278650 350430 321960 333220 315980 375580 282430 265880 396950 410990 313480 261900 174540 251530 261040 300650 315820 282840 288460 352220 322990 344270 320140 376680 298540 280990 392010 391160 298990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 347870000 3004 3913;3914 2865 5550;5551 4591 4591 1 9606 Homo sapiens -0.04520818347555178 AYTDELVELHR Unmodified 1344.6674 0.66737948 3791 Q03111 MLLT1 Protein ENL yes yes 0 0 0 3 0 1 47.357 47.437 3 4.298E-17 12976 20230619_1882_Aki_TMTPro18x_K_F3 183.99 144.96 255980 212800 225220 263590 252550 303010 273610 250570 351440 208180 198000 175000 189250 160610 223610 205900 218110 172760 236490 195240 232030 262450 261120 302140 276860 258570 347070 212020 209920 178810 195140 168530 226360 204410 208420 164600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104090000 3005 3791 2866 5552 4592;4593 4592 2 9606 Homo sapiens 0.008832483839796623 AYTGFSSNSER Unmodified 1217.5313 0.53127993 2230 Q6IAU5;B2R665;O15355;B4DDC8;B3KXL8 PPM1G Protein phosphatase 1G yes no 0 0 0 5 0.816 1 1 1 38.822 38.894 2 1.5546E-30 9070 20230619_1883_Aki_TMTPro18x_K_F4 280.11 231.02 248240 198630 229300 251490 247090 276010 267270 256740 316770 328750 365400 339900 368530 285630 288840 403020 402910 337290 229360 182300 234910 249920 255910 276800 269870 265580 321880 328720 372460 342940 372140 302640 302020 399090 383940 321290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 548080000 3006 2230 2867 5553;5554;5555 4594;4595;4596 4594 3 9606 Homo sapiens -0.06878446126665949 AYTHQVVTR Unmodified 1073.5618 0.56179219 1068 D6R9G1;D6RAD4;A0A0S2Z3F9;P50613;D6REC6 CDK7 Cyclin-dependent kinase 7 yes no 0 0 0 8 0 1 30.085 30.1 3 1.0234E-08 5678 20230619_1888_Aki_TMTPro18x_K_F8 197.27 159.71 26790 19485 24938 25004 40453 35337 30480 34137 38483 29035 31376 34173 41241 37423 29677 27543 38510 32229 24740 17893 25707 24935 40467 34940 31558 34800 38467 29800 32966 34552 41252 37967 30850 28119 36717 30584 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36645000 3007 1068 2868 5556 4597 4597 1 9606 Homo sapiens 0.027953770490285024 AYTNFDAER Unmodified 1085.4778 0.47778779 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;A6NMY6;H0YMU9;B4DNH8;H0YNB8;H0YKS4;A0A7I2V4P4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YMD9;H0YKN4 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 3 0.816 1 1 1 41.714 41.774 2 2.3188E-12 10604 20230619_1881_Aki_TMTPro18x_K_F2 237.61 214.18 452680 298450 352960 401550 460410 597040 482230 411310 582350 552570 672550 693100 646510 587250 578720 648280 724590 666220 417310 274320 368910 399300 471420 584320 487810 436970 590960 555470 684700 693600 657780 612210 598080 651360 691470 632800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2559900000 3008 368 2869 5557;5558;5559 4598;4599 4598 2 9606 Homo sapiens -0.06153198838546814 AYTPPEDLQSR Unmodified 1275.6095 0.60953025 4236 Q8N5N7;Q8N5N7-2 MRPL50 39S ribosomal protein L50, mitochondrial yes no 0 0 0 3.5 0.5 1 1 42.066 42.128 2 7.3001E-06 10511 20230619_1882_Aki_TMTPro18x_K_F3 182.16 156.05 64833 52657 65200 74909 82323 91275 90110 77410 96902 80653 96213 92218 100640 85890 82084 100050 101830 99834 59949 48387 66535 73989 84354 90714 90564 80169 98243 81745 98899 92934 101710 89546 84983 100260 97225 94833 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112340000 3009 4236 2870 5560;5561 4600;4601 4600 2 9606 Homo sapiens -0.017250135414542456 AYVDDTPAEQMK Oxidation (M) 1382.6024 0.60239596 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 1 0 2 0.816 1 1 1 42.694 42.743 3 7.799E-05 11071 20230619_1881_Aki_TMTPro18x_K_F2 110.93 89.375 159570 121170 136350 166660 177000 186340 173010 155570 206960 181900 207140 208800 209490 186450 186660 220860 252700 250180 147310 111330 141230 164720 180560 186230 175660 161850 208860 183340 212610 210050 212780 194880 194040 222920 241130 237320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 256100000 3010 3402 2871 5562;5563;5564 4602;4603 4603 2014 2 9606 Homo sapiens -0.07360114204175261 AYVDDTPAEQMK Unmodified 1366.6075 0.60748134 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 3 0 1 47.656 47.735 2 2.9266E-17 13093 20230619_1882_Aki_TMTPro18x_K_F3 259.08 213.71 43139 32010 38320 40845 36443 48781 46266 41840 48388 51545 53127 60286 63729 48435 54670 68822 62437 59037 39830 29390 39330 40619 38339 48542 46141 43499 49388 51835 54800 60406 64241 51432 56257 68243 59641 56190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147400000 3011 3402 2871 5565 4604 4604 1 9606 Homo sapiens -0.0611581034156643 AYVHEFK Unmodified 892.4443 0.44430282 4514 Q9H4A4;A6NKB8;Q7RU04;C9JMZ3;H7C2T3 RNPEP Aminopeptidase B yes no 0 0 0 7.5 0.5 1 1 41.596 41.63 3 0.0026899 9924 20230619_1887_Aki_TMTPro18x_K_F7 119.21 63.201 373320 322750 390270 399160 359540 394560 425290 366880 418580 475230 574730 538640 580060 485530 502970 585290 604700 545580 345450 296060 394640 396800 377460 398770 424900 379910 433100 476350 582280 542430 588120 507780 518860 584140 577180 518830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 262710000 3012 4514 2872 5566;5567 4605 4605 1 9606 Homo sapiens -0.0062215581975806344 AYVPALQMAFK Unmodified 1237.6529 0.65291539 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4.5 0.5 1 1 62.484 62.51 3 0.0027144 19047 20230619_1885_Aki_TMTPro18x_K_F5 74.162 52.911 275910 233780 250440 254730 283670 365830 291400 287070 387780 203560 157940 150270 186790 151840 219990 192210 182950 163820 254990 214210 257120 257020 292880 359580 296150 296410 379990 209050 174180 155120 191340 158760 220910 191030 175270 155970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 625570000 3013 3758 2873 5568;5569 4606;4607 4607 2 9606 Homo sapiens 0.04359504702142658 AYVRDPYALDLIDK Unmodified 1650.8617 0.86172219 500 B5BU53;B2R9L6;A0A024R880;P50750;P50750-2 CDK9 Cyclin-dependent kinase 9 yes no 0 0 1 7 0 1 57.87 57.922 3 0.0018846 16971 20230619_1887_Aki_TMTPro18x_K_F7 74.296 28.862 43360 41403 43634 45338 43255 44822 45073 45684 47494 56300 50041 43109 57989 47600 48412 62106 53352 57152 40137 37923 44301 45478 44979 45411 45437 46889 48418 55919 51520 44553 58466 49738 49748 61857 51026 54321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15956000 3014 500 2874 5570 4608 4608 1 9606 Homo sapiens 0.062325797492576385 AYVSTLMGVPGR Oxidation (M) 1265.6438 0.64380726 2403 B4DMT5;H0YDT6;B3KSH1;O00303;B4DEW9;Q9BX72 EIF3F;IFP38 Eukaryotic translation initiation factor 3 subunit F yes no 0 1 0 3 0 1 48.052 48.132 2 0.0039473 13296 20230619_1882_Aki_TMTPro18x_K_F3 83.358 63.745 56462 54470 50831 62517 59370 67533 64617 64402 74703 72766 75809 74119 81085 62869 67706 93599 82545 88040 52225 49911 52311 62536 61171 67846 65153 66237 75586 73136 77935 74855 81927 66868 70050 93166 78873 83659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48365000 3015 2403 2875 5571 4609 4609 1479 1 9606 Homo sapiens 0.02161111345799327 AYVSTLMGVPGR Unmodified 1249.6489 0.64889264 2403 B4DMT5;H0YDT6;B3KSH1;O00303;B4DEW9;Q9BX72 EIF3F;IFP38 Eukaryotic translation initiation factor 3 subunit F yes no 0 0 0 4.5 0.5 1 1 55.336 55.374 2 7.6529E-07 15972 20230619_1885_Aki_TMTPro18x_K_F5 190.88 143.03 189950 146650 167690 168050 148890 195580 182080 186260 208110 220240 194630 191240 231180 189950 191620 253100 228880 224170 175410 134480 171960 168370 157360 195420 182510 191770 210160 219890 201880 195500 232900 199340 197940 251520 218600 213250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184660000 3016 2403 2875 5572;5573 4610;4611 4611 2 9606 Homo sapiens 0.03405415208408158 CAADLGLNK Unmodified 960.46987 0.46986564 1477 A0A384NPU2;P49773;A4D2H4 HINT1;LOC346521 Histidine triad nucleotide-binding protein 1 yes no 0 0 0 6.5 0.5 1 1 47.269 47.353 2 0.00048219 12359 20230619_1887_Aki_TMTPro18x_K_F7 149.65 72.596 426760 350130 356610 375960 422760 517060 469020 463550 660360 306580 359190 305110 327990 272420 366030 367160 450720 343000 394090 320820 369320 379520 436050 510830 475750 472980 648570 318990 381020 309220 337800 287100 376160 366090 429680 326430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 647620000 3017 1477 2876 5574;5575 4612 4612 1 9606 Homo sapiens -0.011950493596486922 CAAEREEPPEQR Unmodified 1470.6521 0.65214012 4487 Q9GZP4-2;Q9GZP4 PITHD1 PITH domain-containing protein 1 yes no 0 0 1 1 0 1 27.657 27.657 3 7.2839E-07 5063 20230619_1880_Aki_TMTPro18x_K_F1 150.06 114.85 6439.4 3179.5 6765.7 5249.8 8942.4 11431 8053 10737 9838.4 8058.5 8830.4 9686.1 9243.9 6049.5 9388 4969.5 12636 9441.7 5942.1 2934.2 6871.7 5212.7 9106.5 11063 8232.1 10928 9878.5 8335.1 9132.9 9625.4 9419.8 6318 9695.7 5275.6 12037 8932.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7955500 3018 4487 2877 5576 4613 4613 1 9606 Homo sapiens -0.06435986475526079 CAAPRPPSSSPEQR Unmodified 1538.726 0.72597376 336 Q5H9R7-5;Q5H9R7;Q5H9R7-2;Q5H9R7-6;Q5H9R7-4;E9PKF6;H7BXH2;A0A024R5F3;E9PQP7;B4DYU6;B4DTT7;B4E0C2;H0YEN2;Q7L294;Q9H880 PPP6R3;SAPS3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 0 0 1 6.33 0.471 2 1 29.712 29.768 3 3.0557E-06 5728 20230619_1886_Aki_TMTPro18x_K_F6 120.87 92.903 10734 8545.2 12264 9131.8 14859 17237 11593 14118 18765 11663 15098 12868 11805 12842 12361 13924 18353 15027 9935.6 7830.3 12350 9288.1 15159 16742 12107 14556 18537 11974 15501 13024 12209 13294 12898 14033 17479 14273 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 35422000 3019 336 2878 5577;5578;5579 4614;4615 4615 2 9606 Homo sapiens -0.021840183131871527 CACASHVAK Unmodified 1002.4375 0.43751966 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;D6RFI1;D6RCR4 DBN1 Drebrin yes no 0 0 0 7 0 1 30.448 30.551 3 0.00012196 5591 20230619_1887_Aki_TMTPro18x_K_F7 103.55 55.263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3020 1396 2879 5580 4616 4616 1 9606 Homo sapiens -0.06360160034296314 CADVTLEGQVYPGK Unmodified 1535.729 0.72899346 3899 Q14696 MESDC2 LDLR chaperone MESD yes yes 0 0 0 5 0 1 51.751 51.825 3 2.6018E-05 14559 20230619_1885_Aki_TMTPro18x_K_F5 110.38 97.243 55383 39082 45360 50537 59803 55166 51714 53250 57895 55130 70140 66277 80329 63172 66563 73849 68323 74027 51090 35895 47140 50150 60705 55415 52821 54587 59119 55965 71797 66728 80957 65847 68067 74033 65394 70288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113740000 3021 3899 2880 5581 4617 4617 1 9606 Homo sapiens -0.017441879790339954 CADYVVTGAWSAK Unmodified 1426.6551 0.65510023 183 A0A024R222;B4DHQ3;Q9Y617;A0A024R280;Q9Y617-2 PSAT1 Phosphoserine aminotransferase yes no 0 0 0 8 0 1 55.55 55.612 3 4.935E-06 16002 20230619_1888_Aki_TMTPro18x_K_F8 126.34 104.15 98949 84899 104510 83747 74292 93180 85225 82796 92748 117240 126100 149220 131880 115240 140890 149470 135350 161300 91566 77723 105120 84897 79930 93307 85636 86248 95486 117560 128260 148820 134840 121780 142860 150290 129740 152980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158620000 3022 183 2881 5582 4618 4618 1 9606 Homo sapiens -0.04116111350685969 CAEGYALYAQALTDQQQFGK Unmodified 2261.0423 0.042282105 2627 B4DZ87;O94826;B3KQK0;B3KQK5 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 0 8 0 1 62.235 62.261 3 2.3489000000000002E-30 18746 20230619_1888_Aki_TMTPro18x_K_F8 214.81 200.7 117760 98993 104620 124890 110250 112920 123450 129470 130210 138880 133950 136620 144080 113740 130080 153670 153850 164510 108810 90835 107570 123840 114370 115500 123940 131370 132500 139730 137720 138030 146030 120260 133960 154310 147040 156090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194510000 3023 2627 2882 5583 4619 4619 1 9606 Homo sapiens -0.037797344468799565 CAEIFAR Unmodified 865.41162 0.41162248 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 5.5 0.5 1 1 43.218 43.306 2 0.059832 10939 20230619_1886_Aki_TMTPro18x_K_F6 81.784 43.546 317710 246410 287850 298380 325230 354810 315820 331560 388410 368760 386580 360320 393790 303160 339840 367000 373060 309240 293450 226080 295500 297840 334760 354000 321310 341220 391550 370470 396790 364300 398890 318040 348470 364530 356180 294560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 265760000 3024 4414 2883 5584;5585 4620 4620 1 9606 Homo sapiens -0.026466862142683567 CAGGHDDATLAR Unmodified 1242.5411 0.54113311 3615 P49916-3;P49916;B7Z6I3;P49916-4;P49916-2 LIG3 DNA ligase 3;DNA ligase yes no 0 0 0 1.5 0.5 1 1 28.383 28.421 3 0.0016289 5046 20230619_1881_Aki_TMTPro18x_K_F2 81.565 71.612 3283 2502.8 7000.1 6380.2 6271.3 6845 6433.2 8230.2 8382.9 5384.5 6614.2 6777.3 6167.4 5470.9 6772.9 5037.5 10571 7572.7 3062.8 2321.4 6787.2 6126.7 6568 6909.3 6544 8231 8347.4 5638.5 6852.3 6772.7 6345.1 5665.9 7074.3 5216.7 10057 7176.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55729000 3025 3615 2884 5586;5587 4621 4621 1 9606 Homo sapiens -0.07043581392940723 CAGIDVR Unmodified 789.38032 0.38032236 1169 F8VQZ7;A0A140VJE3;P50579-2;P50579;F8VRR3;P50579-3;Q96B43;G3V1U3;B3KWL6 METAP2 Methionine aminopeptidase 2;Methionine aminopeptidase yes no 0 0 0 3.5 0.5 1 1 36.267 36.317 2 0.018143 8059 20230619_1883_Aki_TMTPro18x_K_F4 107.66 74.875 58479 36907 51135 62377 87139 92323 77972 80766 107610 67635 75203 65298 88467 76251 63028 74661 126200 101380 53941 34025 53171 61227 87455 90775 80003 82917 106550 69105 79159 66834 88761 78266 68067 76507 119960 96099 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77102000 3026 1169 2885 5588;5589 4622 4622 1 9606 Homo sapiens -0.022792592483597218 CAGNEDIITLR Unmodified 1260.6132 0.61323542 3437 Q6FHF5;P12004;Q6FI35;B4DUA2 PCNA Proliferating cell nuclear antigen yes no 0 0 0 4 0.816 1 1 1 47.791 47.857 2 1.5661E-16 12967 20230619_1883_Aki_TMTPro18x_K_F4 221.57 179.99 583330 460500 478830 477110 412000 535040 498940 479700 609800 674800 636540 495650 737320 595780 485840 749320 650710 586270 538470 421880 494150 481510 436650 535440 501580 499010 616490 666270 654920 515360 737240 619480 509000 740670 620550 558810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1662399999.9999998 3027 3437 2886 5590;5591;5592 4623;4624 4624 2 9606 Homo sapiens -0.006646670392228771 CAGPTPEAELQALAR Unmodified 1582.7773 0.77734063 3912 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog yes yes 0 0 0 4 0 1 55.534 55.546 2 1.712E-10 16442 20230619_1883_Aki_TMTPro18x_K_F4 199.7 179.91 33696 29575 32994 34494 27634 32643 34704 38814 40855 39702 29657 33895 44762 35713 34315 52482 44639 38009 31166 27113 33506 34424 29342 33291 34784 39235 40863 39898 31642 34753 44713 37659 35744 51606 42564 36279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28187000 3028 3912 2887 5593 4625 4625 1 9606 Homo sapiens 0.009263056608688203 CALDFFR Unmodified 927.42727 0.42727255 3629 P51970;B7Z768 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes no 0 0 0 1.5 0.5 1 1 57.925 57.925 2 0.064998 17682 20230619_1880_Aki_TMTPro18x_K_F1 85.359 38.593 67529 65837 74852 78070 102970 137550 82940 90552 111500 25867 28695 27699 27116 21078 51986 33716 27531 22409 62573 60343 75896 78572 104420 133410 85631 93983 108420 29863 33316 27896 28915 22615 50973 33108 26542 21423 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41415000 3029 3629 2888 5594;5595 4626;4627 4626 2 9606 Homo sapiens -0.039343996972206696 CALGWDHQEK Unmodified 1242.5452 0.54515585 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;Q76MU0 CTTN;EMS1 Src substrate cortactin yes no 0 0 0 4.5 0.5 1 1 41.988 42.052 3 7.6476E-05 10357 20230619_1885_Aki_TMTPro18x_K_F5 139.15 89.687 222390 167020 253480 265530 309270 364760 308560 323080 365140 269510 340290 328020 311490 290170 312210 250070 358940 316170 205770 153730 255880 261190 316960 360110 312910 331410 367380 277230 348980 329050 319070 298390 319660 255910 342680 299750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 230510000 3030 1413 2889 5596;5597 4628;4629 4629 2 9606 Homo sapiens -0.06641491899222274 CAMTALSSK Unmodified 967.44669 0.44668736 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 1.5 0.5 1 1 45.865 45.947 2;3 4.2646E-05 12580 20230619_1881_Aki_TMTPro18x_K_F2 164.96 104.27 92100 87280 90432 82605 99679 122600 103060 101330 140460 69392 79802 65506 71761 55748 80467 77581 86494 65265 85234 79849 92114 84400 103060 120460 104820 104110 138300 71885 84297 66458 73915 58990 81980 76937 82551 62198 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127840000 3031 4005 2890 5598;5599 4630;4631 4631 2 9606 Homo sapiens -0.03833811468609838 CAMTALSSK Oxidation (M) 983.4416 0.44160198 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9 CCT7 T-complex protein 1 subunit eta yes no 0 1 0 8 0 1 39.228 39.215 2 0.0015343 9141 20230619_1888_Aki_TMTPro18x_K_F8 110.41 86.639 48671 41591 45149 43270 59833 64113 55839 54468 72463 29892 32920 31075 29354 28260 40924 36441 40768 23817 44990 38093 46366 43854 60900 63042 57005 55644 71167 31656 35493 31444 30671 29637 41371 35806 38891 22818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28553000 3032 4005 2890 5600 4632 4632 2636 1 9606 Homo sapiens -0.05078115331218669 CANLFEALVGTLK Unmodified 1434.7541 0.754086 4642 Q9P1F3 ABRACL Costars family protein ABRACL yes yes 0 0 0 3.5 0.5 1 1 65.711 65.734 3 0.0011651 20713 20230619_1883_Aki_TMTPro18x_K_F4 83.204 63.097 7399.5 6330.9 7198.1 7926.8 7540.4 8126.7 9039.9 10016 10879 8872.1 9701.9 9727 11017 6864.4 9145.1 12960 10965 11204 6842.6 5808.4 7339.3 7878.9 7845.9 8245.4 9085.3 10068 10925 9052 10066 9750.6 11099 7505.5 9454.2 12814 10475 10659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41498000 3033 4642 2891 5601;5602 4633 4633 1 9606 Homo sapiens 0.05409911614174234 CAQAQTGIDLSGCTK Unmodified 1608.7236 0.7235905 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24;E5RHJ4 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 6.5 0.5 1 1 46.494 46.58 3 1.3057E-10 12029 20230619_1887_Aki_TMTPro18x_K_F7 153.79 137.4 63829 42954 43321 55062 57667 63675 56415 50564 68856 69367 63414 70571 78420 61581 55918 82960 71475 68098 58799 39457 45997 54693 58805 63437 57309 53087 69281 69154 65999 71270 78471 64947 58264 82115 68213 64850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 325670000 3034 2414 2892 5603;5604 4634 4634 1 9606 Homo sapiens -0.05642234833158 CASQAGMTAYGTR Oxidation (M) 1388.5813 0.58128336 3933 Q15417;Q15417-3;Q15417-2;E9PDU6 CNN3 Calponin-3;Calponin yes no 0 1 0 6.5 0.957 1 2 2 1 32.267 32.323 2;3 2.4836E-06 6572 20230619_1886_Aki_TMTPro18x_K_F6 133.15 55.964 56906 47031 51243 51886 46362 58090 48532 50315 71397 52109 58759 44305 55969 48058 48097 53165 63526 43914 52579 43103 52456 52098 48717 58091 49528 51983 70862 52394 60641 45521 56861 49712 49917 52823 60497 41880 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 127620000 3035 3933 2893 5605;5606;5607;5608;5609;5610 4635;4636;4637;4638 4635 2610 4 9606 Homo sapiens -0.09746402784708152 CASQAGMTAYGTR Unmodified 1372.5864 0.58636874 3933 Q15417;Q15417-3;Q15417-2;E9PDU6 CNN3 Calponin-3;Calponin yes no 0 0 0 7.5 0.5 1 1 37.093 37.119 2 4.8960999999999995E-21 8295 20230619_1888_Aki_TMTPro18x_K_F8 232.48 212.87 88607 69063 75704 67298 48738 53603 55350 54240 65183 77358 80180 55979 73662 66529 51857 87854 89952 53389 81810 63241 77493 68012 52988 55323 55811 56008 66487 76294 81067 58272 74412 69352 55406 85919 85444 51209 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69140000 3036 3933 2893 5611;5612 4639;4640 4640 2 9606 Homo sapiens -0.08502098922099321 CATITPDEAR Unmodified 1132.5183 0.5182724 3600 Q53GL5;P48735;P48735-2;Q13584 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] yes no 0 0 0 2.5 0.5 1 1 36.788 36.845 2 3.6264E-05 8312 20230619_1882_Aki_TMTPro18x_K_F3 177.7 145.09 61508 38685 53200 63674 66606 79751 75352 73857 90516 75420 92600 101200 99224 92354 73627 90326 121800 105880 56729 35652 55019 62407 68444 79229 75911 75908 91369 76965 95223 101250 99947 95418 78057 91634 115970 100460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290630000 3037 3600 2894 5613;5614 4641 4641 1 9606 Homo sapiens -0.04268600510431497 CATITPDEK Unmodified 1033.475 0.4750106 274 V9HW78;B2R5M8;A0A024R3Y6;O75874;Q6FIA4;Q6FI37;Q0QER2;C9J4N6;A0A0A0U6N4 HEL-216;IDH1 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 3 0 1 41.304 41.363 2 0.00066442 10196 20230619_1882_Aki_TMTPro18x_K_F3 141.48 108.36 31339 18578 39673 35475 46790 53401 37557 38542 45207 37838 58760 67795 50614 58351 55438 30122 66912 70531 28992 17163 39686 34639 47795 52262 38671 40388 46111 39218 59365 67066 52250 58982 56776 33077 63935 66549 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18669000 3038 274 2895 5615 4642 4642 1 9606 Homo sapiens -0.04038790287700067 CCAFNDTREEGK Unmodified 1485.5977 0.59766171 4671 Q9UJX2-3;Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes no 0 0 1 3 0 1 37.247 37.301 3 0.0039913 8491 20230619_1882_Aki_TMTPro18x_K_F3 81.709 77.466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3039 4671 2896 5616 4643 4643 1 9606 Homo sapiens -0.1257132161856589 CCCIYEK Unmodified 1031.3875 0.38745792 1912 Q5SRK2;A2BEK1;O60927 PPP1R11 Protein phosphatase 1 regulatory subunit 11 yes no 0 0 0 6 0 1 42.483 42.578 2 0.0090158 10609 20230619_1886_Aki_TMTPro18x_K_F6 119.89 100.27 32708 19330 25503 34135 32975 47435 32980 32895 55548 37925 38408 46519 46344 41397 29812 46846 55357 52834 30136 17838 26685 33377 33814 46568 33922 34747 54583 38382 40585 46641 46314 43154 32106 47271 52700 50128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20148000 3040 1912 2897 5617 4644 4644 1 9606 Homo sapiens -0.1269803075447271 CCFSGDGEYIVAGSAR Unmodified 1747.7294 0.72940416 563;3927 A0A024R9B5;B4DMM7;Q15291;B4DLF8;Q15291-2 RBBP5 Retinoblastoma-binding protein 5 no no 0 0 0 5 0 1 49.293 49.37 2 3.8136E-05 13472 20230619_1885_Aki_TMTPro18x_K_F5 101.6 96.704 15441 12220 12188 16131 13691 16486 16352 14102 15383 22865 21384 20300 26120 20284 19827 27386 25324 24829 14250 11221 12701 15964 14186 16587 16301 14813 16003 22552 21854 20733 26198 21308 20617 27240 24173 23612 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5989900 3041 563;3927 2898 5618 4645;4646 4645 2 9606 Homo sapiens -0.11455136321478676 CCIPETR Unmodified 934.40007 0.40007152 2141 A8K9T8;Q9BYT8;B3KU23;E9PCB6;Q9BQD0 NLN Neurolysin, mitochondrial yes no 0 0 0 3.5 0.5 1 1 34.588 34.644 2 0.022633 7364 20230619_1883_Aki_TMTPro18x_K_F4 107.43 94.441 144510 84318 133460 132560 165770 180850 151080 164820 206650 163730 203330 193970 223030 180190 161090 140680 258570 212510 133300 77690 136960 130480 169350 178770 154930 169380 207100 166570 209470 195030 224080 184390 170120 146120 246140 201250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 103520000 3042 2141 2899 5619;5620 4647;4648;4649 4649 3 9606 Homo sapiens -0.06975251299923002 CCLTYCFNKPEDK Unmodified 1733.7211 0.72114766 1332 Q5RKT7;A0A248RGE3;P62979;B2RDW1;Q8WYN9 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a yes no 0 0 1 5.33 3.09 1 1 1 49.606 49.658 3 1.9151E-08 14196 20230619_1880_Aki_TMTPro18x_K_F1 166.48 156.23 1663300 1331500 1480500 1349900 1198100 1414200 1535700 1404100 1396400 1915900 660460 597410 2201100 1101200 602490 2367000 1879400 1865700 1536400 1219500 1514200 1364000 1276500 1425600 1524400 1448300 1407400 1868400 777770 685080 2118200 1190700 720860 2323900 1785800 1777400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1427100000 3043 1332 2900 5621;5622;5623 4650;4651;4652;4653 4650 4 9606 Homo sapiens -0.11636406562502088 CCNHPYLFPVAAMEAPK Unmodified 2003.9056 0.90559439 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 0 2 0 1 56.356 56.374 3 4.2921E-09 17182 20230619_1881_Aki_TMTPro18x_K_F2 123.02 113.86 28024 19268 28051 27763 22762 27336 26271 29161 27386 34031 26823 29012 36093 24100 25646 37395 35676 34030 25887 17721 28411 27334 24171 27703 26343 29784 27869 33957 27960 29512 36013 25757 26879 37137 34026 32363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50463000 3044 1005 2901 5624 4654 4654 1 9606 Homo sapiens -0.05620218411945643 CCPCGQTPLSQLLELGSSSR Unmodified 2249.0239 0.023871624 3828 Q12986-2;Q12986;A0JLR2;Q12986-3 NFX1 Transcriptional repressor NF-X1 yes no 0 0 0 3 0 1 63.207 63.237 3 0.014565 19759 20230619_1882_Aki_TMTPro18x_K_F3 34.217 25.398 53677 38462 43914 39296 33506 58216 48736 42693 86650 21562 23926 23033 27888 21703 31459 23677 21287 20449 49521 35246 45265 39885 36307 57028 49359 44138 83382 23132 27668 23298 28513 22538 31321 23612 20459 19460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58674000 3045 3828 2902 5625 4655 4655 1 9606 Homo sapiens -0.05067935684701297 CCSFDGDADR Unmodified 1201.4128 0.41282105 1553 O95394-4;J3KN95;H0Y987;A0A8V8TMH7;B3KN28;A0A8V8TLT8;A0A494C1Q4;A0A8V8TNH4;A0A494C1E2;A0A8V8TMI1;O95394;O95394-3;A0A087WT27;A0A494C0G1 PGM3 Phosphoacetylglucosamine mutase yes no 0 0 0 1 0 1 36.023 36.023 2 1.8596E-23 8374 20230619_1880_Aki_TMTPro18x_K_F1 217.2 210.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3046 1553 2903 5626 4656 4656 1 9606 Homo sapiens -0.1798288469833551 CCSGAIIVLTK Unmodified 1220.6257 0.62571436 3451 V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7;Q9UKK4;Q9NYI7;Q9UK31 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM yes no 0 0 0 2.5 0.5 1 1 54.489 54.525 2 4.3767E-12 16138 20230619_1882_Aki_TMTPro18x_K_F3 207.88 190.55 442380 345760 370230 370000 404990 434640 440030 434470 487260 577930 518120 491720 624730 514700 429290 654430 502540 593210 408390 316860 382610 372750 418960 434800 443140 447540 495640 573700 534400 504080 624820 537670 445310 651290 480740 563750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2295500000 3047 3451 2904 5627;5628 4657;4658 4658 2 9606 Homo sapiens 0.024226530994610584 CCTESLVNR Unmodified 1137.4907 0.49067744 2776 CON__P02769;B4DPR2;P02768;B4DPP6;H0YA55;CON__P02768-1;F6KPG5;A0A0C4DGB6;A8K9P0;B2RBS8;P02768-2;C9JKR2;D6RHD5;B7WNR0;P02768-3;A0A087WWT3 ALB Serum albumin yes no 0 0 0 4.5 0.5 1 1 36.514 36.583 2 8.1184E-12 8133 20230619_1883_Aki_TMTPro18x_K_F4 224.28 206.89 + 65708 189210 212100 66558 790680 886240 341590 352340 840770 181630 194410 281240 106970 158680 183040 170490 312150 414560 62834 171880 211130 88049 764320 821780 384930 391380 800800 197700 226520 276540 116600 168390 191870 184710 298130 390790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 589260000 3048 2776 2905 5629;5630 4659;4660 4659 2 9606 Homo sapiens -0.07256827042306213 CDAVSVLEK Unmodified 1019.4957 0.49574604 419 A0A024R6Z0;O43237-2;O43237;B4E2E0;B4DHD8 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 4.5 0.5 1 1 50.514 50.59 2;3 0.0035393 14273 20230619_1883_Aki_TMTPro18x_K_F4 94.85 50.403 194010 157580 165040 188290 188890 211700 195950 193550 215940 246890 273710 266710 283010 263230 292710 313610 285840 311690 179170 144540 170570 187920 194610 211900 197830 200420 221290 247260 278540 269870 289120 274190 297230 314190 273730 295970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13990000 3049 419 2906 5631;5632 4661;4662 4661 2 9606 Homo sapiens -0.013221999080087699 CDENILWLDYK Unmodified 1467.6704 0.67041595 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;A0A024R609;H3BQ34;H3BUW1;H3BTJ2;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 3.83 1.07 1 1 2 2 62.448 62.472 2;3 6.7074E-12 19373 20230619_1883_Aki_TMTPro18x_K_F4 202.16 163.14 1228300 1071700 1144900 1115600 1053000 1300200 1349400 1355700 1459500 1815000 1619100 1544700 1819500 1706500 1650200 1910700 1771000 1895200 1135600 981480 1168700 1126400 1110200 1302200 1347100 1392800 1489000 1801100 1662100 1586000 1843600 1765400 1689100 1915300 1694100 1799700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5088800000 3050 370;3451 2907 5633;5634;5635;5636;5637;5638 4663;4664 4663 2 9606 Homo sapiens -0.04471244553519682 CDEPILSNR Unmodified 1102.5077 0.50770771 2861 D9IAI1;P30086;A0A0K0K1J6;V9HW05 HEL-S-34;PEBP1;HEL-210 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 2.5 0.5 1 1 39.743 39.806 2 5.7771E-05 9657 20230619_1881_Aki_TMTPro18x_K_F2 162.49 131.42 382050 313380 297980 322410 352450 473250 384190 381110 650770 393500 502940 507200 495370 487880 409950 550390 604880 510540 352630 287040 310780 326900 364070 464880 393480 395980 640890 401260 522440 509390 502520 506710 429860 549500 576210 485680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1453900000 3051 2861 2908 5639;5640 4665;4666 4665 2 9606 Homo sapiens -0.03944583164843607 CDFPIMK Unmodified 909.40885 0.40884529 3793 X5DNM4;V9HW62;Q04760-2;Q04760 GLO1;HEL-S-74 Lactoylglutathione lyase yes no 0 0 0 7.5 0.5 1 1 53.633 53.702 2 0.020027 15144 20230619_1888_Aki_TMTPro18x_K_F8 94.262 47.575 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3052 3793 2909 5641;5642 4667;4668 4668 2 9606 Homo sapiens -0.04948277663436329 CDFTEDQTAEFK Acetyl (Protein N-term) 1531.6137 0.61368893 2989 F8W1R7;P60660-2;P60660;G3V1V0;G3V1Y7 MYL6 Myosin light polypeptide 6 yes no 1 0 0 2 0.816 1 1 1 57.893 57.9 2 4.533999999999999E-19 17610 20230619_1880_Aki_TMTPro18x_K_F1 171.36 171.36 158920 132530 130590 130500 141850 162220 164250 166510 173920 204670 181310 166370 211500 154220 172710 227430 187770 202700 146750 121340 135200 132490 147160 161790 164620 170730 177160 203570 186880 170320 212880 163480 177450 225800 179610 192730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1384500000 3053 2989 2910 5643;5644;5645 4669;4670;4671 4669 3 9606 Homo sapiens -0.13085336900712718 CDFTQMSQYFK Unmodified 1453.6006 0.60062182 2724 P11387;B9EG90 TOP1 DNA topoisomerase 1 yes no 0 0 0 1.5 0.5 1 1 61.479 61.484 3 0.026683 19263 20230619_1881_Aki_TMTPro18x_K_F2 56.205 40.067 130420 125100 143220 146890 128040 151790 143720 142050 153910 141230 141250 169100 148470 117150 149750 182590 161640 158370 120820 114660 144220 146640 134660 152890 144370 145820 155710 143600 146060 168630 151330 125980 153090 180970 154520 150690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 343700000 3054 2724 2911 5646;5647 4672 4672 1 9606 Homo sapiens -0.10803446493787305 CDFTQMSQYFK Oxidation (M) 1469.5955 0.59553644 2724 P11387;B9EG90 TOP1 DNA topoisomerase 1 yes no 0 1 0 8 0 1 52.36 52.438 3 0.00060936 14602 20230619_1888_Aki_TMTPro18x_K_F8 92.866 79.666 73533 63741 64458 70876 82751 66239 80037 71802 77074 82399 94299 70654 92549 69776 85141 87045 90110 74011 67949 58410 66517 70960 84231 67559 80761 73279 79400 82339 95708 72334 94085 72954 86986 86470 86057 70493 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59163000 3055 2724 2911 5648 4673 4673 1632 1 9606 Homo sapiens -0.12047750356418874 CDHEGPCSVDR Unmodified 1330.503 0.50303304 3834 Q59GL0;Q13129 RLF Zinc finger protein Rlf yes no 0 0 0 1 0 1 27.56 27.56 3 0.00034334 5040 20230619_1880_Aki_TMTPro18x_K_F1 96.64 63.232 2787.7 0 2843.8 2979.5 2927.1 2015.8 4031 4283.1 4380.8 1849.9 2391.8 3355.1 3667.6 2420.9 3368.6 2465.9 3025.3 3928.1 2562.1 0 2885.8 2747.5 3052.7 2158.9 4009.4 4154.4 4354.8 2046.4 2611.3 3305 3684 2534.9 3406.7 2561.7 2904.1 3712.1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2823300 3056 3834 2912 5649 4674 4674 1 9606 Homo sapiens -0.14899835369919856 CDHPVCYR Unmodified 1105.4433 0.44333332 3070 H3BPG6;Q86UK7-2;Q86UK7-3;Q86UK7 ZNF598 Zinc finger protein 598 yes no 0 0 0 4 0.816 1 1 1 28.591 28.677 3 0.024403 5316 20230619_1885_Aki_TMTPro18x_K_F5 65.88 56.447 22702 13617 20935 24765 29392 32367 27007 28314 34605 19292 24233 21781 25215 20915 21342 20822 25076 22678 20944 12569 21565 24166 29813 32036 27594 28959 34359 20091 25373 21990 25523 21603 21972 21036 23940 21529 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 14933000 3057 3070 2913 5650;5651;5652 4675;4676 4676 2 9606 Homo sapiens -0.1051706152263705 CDLEDER Unmodified 935.36546 0.36546015 655;2153;447 A0A024R7G2;B2R8W8;O95716;P61224;P61224-3;A0A024RB87;F5H7Y6;E7ESV4;F5GX62;A6NIZ1;P61224-4;P61224-2;Q9BXV4;F5H004;B7ZB78;Q5U0C3;F5GZG1;F5H823;B7ZAY2;A8KAH9;P62834 RAB3D;RAP1B;RAP1A Ras-related protein Rab-3D;Ras-related protein Rap-1b;Ras-related protein Rap-1b-like protein;Ras-related protein Rap-1A no no 0 0 0 1 0 1 33.954 33.954 2 0.0056347 7541 20230619_1880_Aki_TMTPro18x_K_F1 139.31 129.33 74272 34252 81661 87300 101350 131320 97447 113190 134600 86259 125640 155690 122770 125850 118740 57341 152110 142980 68547 31854 82700 84254 103810 128850 99649 116120 134440 90824 129400 153670 125370 127160 122290 63747 145150 134930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128620000 3058 447;655;2153 2914 5653 4677 4677 1 9606 Homo sapiens -0.10480795907017182 CDLFIQEGAR Unmodified 1207.5656 0.56555694 2827 K7EMM8;D3DUE6;Q49A26-5;Q49A26-2;Q49A26;Q49A26-4 GLYR1;N-PAC Putative oxidoreductase GLYR1 yes no 0 0 0 4 0 1 49.158 49.196 2 0.0016831 13629 20230619_1883_Aki_TMTPro18x_K_F4 119.22 95.455 47954 42124 42799 42270 42809 44785 57200 47690 57739 59765 60608 55353 63594 52799 56942 64874 66572 61655 44323 38566 43910 42747 44828 45197 56829 48860 58915 59620 62147 56331 64491 55194 58592 64798 63568 58612 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45124000 3059 2827 2915 5654 4678 4678 1 9606 Homo sapiens -0.029923212394123766 CDMEDERVVSSER Oxidation (M) 1626.6614 0.66138418 455 S4R3Q3;A0A024R7I7;P20336;B4DE50 RAB3A Ras-related protein Rab-3A yes no 0 1 1 1 0 1 31.755 31.755 3 0.0025477 6694 20230619_1880_Aki_TMTPro18x_K_F1 78.964 69.601 11887 9854.5 10110 13710 12597 10228 10423 12436 11900 10347 14213 15395 12317 10647 15480 10033 18045 15613 10979 9052.4 10470 13478 12807 10665 10691 12501 12123 10717 14405 15231 12785 11111 15794 10422 17223 14779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15591000 3060 455 2916 5655 4679 4679 280 1 9606 Homo sapiens -0.12688005972154315 CDMSALQR Oxidation (M) 995.41645 0.41644987 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A994J4Z2;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;Q59FZ6;A0A2R8YF80;A0A2R8YGP5;B4E0F1;B4DSI8;B3KNW7;A0A2R8Y523;A0A2R8YFV8;A0A2R8Y4R6;A0A2R8YCY3 SMARCA4 Transcription activator BRG1 yes no 0 1 0 3.5 0.5 1 1 31.255 31.33 2 0.027881 6127 20230619_1882_Aki_TMTPro18x_K_F3 74.184 40.106 29384 18607 28553 25747 34415 36497 32409 33883 40100 30734 33975 34281 34077 30666 36525 31731 41183 35057 27125 17111 29143 25558 35230 36024 33032 34696 40147 31358 35163 34518 34912 31805 37324 32076 39316 33285 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15265000 3061 1348 2917 5656;5657 4680 4680 849 1 9606 Homo sapiens -0.08144170133800799 CDPAGYYCGFK Unmodified 1336.5216 0.52164322 1226 G3V295;A0A140VK44;G3V5Z7;P60900;P60900-2;P60900-3;Q59F72 PSMA6 Proteasome subunit alpha type;Proteasome subunit alpha type-6 yes no 0 0 0 7.5 0.5 1 1 52.011 52.087 3 0.0088809 14404 20230619_1888_Aki_TMTPro18x_K_F8 68.536 63.359 77366 63872 73544 78581 84169 86721 82569 80751 143670 88898 102550 80240 92767 68821 94742 88291 87253 82234 71513 58597 75207 78257 86627 86961 85182 83127 141050 89282 106550 81550 95018 72446 95856 88100 83521 78189 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151610000 3062 1226 2918 5658;5659 4681 4681 1 9606 Homo sapiens -0.13315673728038746 CDPVFDFGTGPR Unmodified 1366.5976 0.59758535 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;Q9BY44-2;H7C5R5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 4.5 0.5 2 2 55.532 55.57 2;3 3.5478E-08 16087 20230619_1885_Aki_TMTPro18x_K_F5 169.65 140.6 107520 107430 102550 105070 94787 113620 108110 101520 131720 137480 116200 123170 144200 116050 117370 141160 136120 139570 99518 98293 104500 106480 99544 114020 108970 105520 132350 136600 121210 125400 144980 121320 120990 141290 130080 132570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 208500000 3063 4468 2919 5660;5661;5662;5663 4682;4683 4683 2 9606 Homo sapiens -0.07104953556290639 CDQCDYACR Unmodified 1246.4165 0.41652622 1351 A0A2R8Y595;A0A2R8YFL0;P49711-2;P49711 CTCF Transcriptional repressor CTCF yes no 0 0 0 2 0 1 31.973 32.033 2 2.7731E-06 6512 20230619_1881_Aki_TMTPro18x_K_F2 188.66 175.08 13266 8345.9 16590 15701 18678 26409 16233 19850 22887 15143 18377 21677 21939 22286 13580 7288.9 24320 20645 12274 7706.2 16608 15375 19220 25709 16726 20591 22738 15780 19232 21693 21915 22177 14508 8341.8 23140 19481 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7829000 3064 1351 2920 5664 4684 4684 1 9606 Homo sapiens -0.1968253819613892 CDSSPDSAEDVR Unmodified 1336.5201 0.52012289 2780 CON__P12763;B7Z556;B7Z8Q2;P02765 AHSG Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B yes no 0 0 0 1 0 1 32.725 32.725 2 8.7674E-24 7055 20230619_1880_Aki_TMTPro18x_K_F1 310.21 293.99 + 5763.3 11329 23525 8372 145530 166090 51917 60969 141630 27913 121790 221370 30217 66724 143570 14791 81976 125160 5511.8 10329 24170 10672 139200 153510 60446 68589 137870 36067 122680 210190 39356 70956 139900 22308 79328 117550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108440000 3065 2780 2921 5665 4685 4685 1 9606 Homo sapiens -0.13467636283144202 CDSSPDSAEDVRK Unmodified 1464.6151 0.61508591 2780 CON__P12763;B7Z556;B7Z8Q2;P02765 AHSG Alpha-2-HS-glycoprotein;Alpha-2-HS-glycoprotein chain A;Alpha-2-HS-glycoprotein chain B yes no 0 0 1 2 0.816 2 2 2 34.872 34.912 3;4 2.6404E-06 7593 20230619_1882_Aki_TMTPro18x_K_F3 135.81 122.83 + 46942 42307 76577 61816 237720 285000 121470 139920 241830 66115 154670 233980 91710 119540 139740 58736 171710 222100 43660 38874 77693 63576 231420 267750 132780 150820 235400 76296 160580 225660 98251 123780 142580 69393 164330 209040 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1452000000 3066 2780 2922 5666;5667;5668;5669;5670;5671 4686;4687;4688;4689 4689 4 9606 Homo sapiens -0.09863702811958319 CDSVEEETGINR Unmodified 1407.5936 0.59362219 631 A0A7P0Z481;B2R649;A8KA27;A0A024RAP2;P04035-2;P04035;P04035-3 HMGCR 3-hydroxy-3-methylglutaryl coenzyme A reductase;3-hydroxy-3-methylglutaryl-coenzyme A reductase yes no 0 0 0 1 0 1 39.548 39.548 2 0.00060948 9919 20230619_1880_Aki_TMTPro18x_K_F1 116.23 108.31 9532 7107.4 8323.9 9390.2 4512.2 5415 6867.8 6021 10702 10890 9686.4 5887.4 9495.4 8576 8420.4 15788 14328 9314.9 8799.8 6527.9 8503.9 9243 5065.9 5792.7 6908.9 6246.3 10647 10600 9949.1 6322 9659.5 9131.4 8946.9 15364 13617 8934.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18439000 3067 631 2923 5672 4690 4690 1 9606 Homo sapiens -0.09387087840650565 CDTEFPNFK Unmodified 1156.4859 0.48590964 3514 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 5 0 1 53.106 53.178 3 0.00084464 15114 20230619_1885_Aki_TMTPro18x_K_F5 86.67 57.197 48472 40908 40277 42308 44014 54655 46220 47425 65477 48575 57666 53088 58702 48960 48790 61846 53322 54334 44766 37467 41671 42790 45587 54165 47064 48970 65236 49216 59528 53599 59405 51310 50112 61488 50981 51683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38965000 3068 3514 2924 5673 4691 4691 1 9606 Homo sapiens -0.08607387913411912 CDVDIRK Unmodified 904.44365 0.44365089 3112;3679;4827 P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;Q96FU6;Q96DE1;A5GZ75;A4UCT3;F1BXA6;Q562R1;Q9UE89;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;V9HVZ7 ACTG1;ACTBL2;ACTB;PS1TP5BP1;HEL-176 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 0 1 5.5 1.12 1 1 1 1 37.616 37.694 3 0.015389 8578 20230619_1883_Aki_TMTPro18x_K_F4 81.119 49.747 893060 472940 1012300 937900 1827200 1503700 1110400 1856800 932230 897300 1308400 1108900 1235400 1042400 1141700 447920 1335700 927750 824880 437450 1029400 916270 1809300 1485600 1158100 1843600 975280 963380 1320300 1114200 1258400 1046700 1169200 489180 1273300 877590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 8156399999.999999 3069 3112;3679;4827 2925 5674;5675;5676;5677 4692;4693;4694;4695 4692 4 9606 Homo sapiens -0.012393185311339039 CDYENVPTTVFTPLEYGACGLSEEK Unmodified 2878.2677 0.26772653 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 0 3.5 0.5 1 1 63.498 63.517 3 8.0323E-20 19824 20230619_1883_Aki_TMTPro18x_K_F4 155.17 148.95 8216.1 5211.4 4488.5 7058.1 5936.7 9606.6 8016.3 4961.6 8884.2 10304 9366.6 9295.8 10502 8878.9 8092.2 12113 8622.1 12027 7558 4791.3 4912.4 6998.7 6142 9406.1 7976.8 5541.4 9029.3 10103 9634.3 9469 10567 9345.7 8324.4 12103 8268 11412 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46279000 3070 682 2926 5678;5679 4696 4696 1 9606 Homo sapiens -0.09627662620277988 CEASGKPEVQFR Unmodified 1406.6612 0.66124824 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;E7EPI4;E7EVM4;E9PHJ4;E7EMY4 L1CAM Neural cell adhesion molecule L1 yes no 0 0 1 6.5 0.5 1 1 40.691 40.771 3 0.00022522 9827 20230619_1886_Aki_TMTPro18x_K_F6 86.944 52.26 836230 549190 802030 825780 720850 769600 871910 888640 996680 1123000 1415200 1431900 1241400 1193100 1207700 1036500 1387400 1348100 772030 505440 816480 810420 759170 785040 874800 906040 1024700 1131300 1424800 1430800 1271700 1229900 1237600 1062300 1325400 1277300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 483460000 3071 2005 2927 5680;5681 4697;4698;4699 4697 3 9606 Homo sapiens -0.025815931192028074 CEEEAAVQPHSR Unmodified 1411.615 0.61502633 2848 Q9UPQ0-10;Q9UPQ0;D6RD46;Q9UPQ0-2;Q9UPQ0-4;G5EA03;E9PDJ9;B7Z2J4;E7EPK0;Q9UPQ0-3;Q9UPQ0-8;Q9UPQ0-5;Q9UPQ0-6;H0Y8P3;Q9UPQ0-9;B7Z5Q8;B7Z3F1;B7Z3G0;B7Z5G6;B7Z656;Q6N054 LIMCH1;DKFZp686G03277 LIM and calponin homology domains-containing protein 1 yes no 0 0 0 1 0 1 29.712 29.712 3 3.1573E-24 5865 20230619_1880_Aki_TMTPro18x_K_F1 210.93 190.83 7158.5 4110.2 5587.9 5501.4 8377.8 8463.1 5382.8 6598.7 8302.5 4920.4 9229.7 9210.2 6054 7317.1 11237 5317.9 8815.8 9275.1 6594.9 3780.2 5845.2 5478.6 8405.9 8290.5 5696.1 6822.3 8311.4 5200.6 9294.6 9091.2 6537.6 7497.1 11169 5617.6 8461.5 8765.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27992000 3072 2848 2928 5682 4700 4700 1 9606 Homo sapiens -0.07431658021255316 CEEILHK Unmodified 927.4484 0.44840192 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 0 3.5 0.5 1 1 40.343 40.393 3 0.064042 9716 20230619_1883_Aki_TMTPro18x_K_F4 53.833 13.401 180970 132860 179340 184360 200540 212470 211190 212360 251490 193420 217200 196460 235590 180510 190810 198160 250620 196330 167220 122100 182670 182300 206890 212680 213550 216420 252380 196690 225080 198870 237660 187750 198120 198760 238830 186700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60936000 3073 4666 2929 5683;5684 4701 4701 1 9606 Homo sapiens -0.018224343883503025 CEELLEK Unmodified 919.43208 0.43208315 3298 O75367;O75367-3;O75367-1;A0A8I5KRC6;B4DJC3;A0A8I5KS04;Q59FH0 H2AFY Core histone macro-H2A.1;Histone H2A yes no 0 0 0 2.67 0.471 1 2 47.614 47.69 2 0.0075799 13366 20230619_1881_Aki_TMTPro18x_K_F2 124.08 66.52 104970 73470 73061 80929 73796 107780 84218 87292 166760 111750 101390 116490 168960 137130 58706 208680 216750 206610 96732 67377 76957 81472 77347 106430 86789 91219 162510 111990 109970 118910 165250 144600 71175 207920 205790 196300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214400000 3074 3298 2930 5685;5686;5687 4702;4703 4702 2 9606 Homo sapiens -0.030855603451072966 CEFAVGYQR Unmodified 1128.5022 0.50222841 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;A0A6I8PRS0;A0A6I8PLB8;A0A6I8PLB3;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRU9;Q6NVI4;Q9P0T1;Q0VGM8 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 44.015 44.1 2 0.00039974 11264 20230619_1886_Aki_TMTPro18x_K_F6 137.18 126.95 339040 296170 295060 304880 302100 313910 332940 322940 366280 393620 368690 374970 417420 346170 362650 419520 432840 408170 313300 271210 303530 307520 314020 317180 334980 331190 371640 393400 380340 380500 421880 361970 373900 419620 413290 387890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 261710000 3075 1603 2931 5688;5689 4704;4705 4705 2 9606 Homo sapiens -0.05688261956674978 CEFQDAYVLLSEK Unmodified 1600.7443 0.74430917 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;B9VP19;B9VPB4;Q53QD5 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 5 0.816 1 1 1 62.959 62.993 3 4.9869E-09 19581 20230619_1883_Aki_TMTPro18x_K_F4 168.76 149.93 201730 178920 195940 210100 164570 210550 235310 230390 252200 246900 211590 214390 275780 207030 211700 311980 241000 278840 186590 164030 199200 209690 175530 213280 233650 234430 254460 247650 221800 219030 276240 219480 218590 309630 230570 265060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4874000000 3076 272 2932 5690;5691;5692 4706;4707 4706 2 9606 Homo sapiens -0.032033211818770724 CEGINISGNFYR Unmodified 1428.6456 0.64559818 1419 A0A7I2V5L3;Q9BSQ6;Q53H34;A0A384ME37;M0QYS1;P40429;Q5QTS3;B4DNC8 RPL13A 60S ribosomal protein L13a yes no 0 0 0 7.33 0.471 2 1 51.436 51.514 2;3 1.001E-17 14171 20230619_1888_Aki_TMTPro18x_K_F8 234.9 208.84 813460 719900 705310 695640 567530 711390 805490 775360 791880 867930 499930 445710 926940 587010 500640 1045000 900060 785430 751740 658870 723500 705460 607500 719900 797850 789940 797350 859300 544700 477250 911510 626100 541560 1026400 856520 749170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 664900000 3077 1419 2933 5693;5694;5695 4708;4709;4710 4710 3 9606 Homo sapiens -0.051578796362264256 CEHDLDDCAGR Unmodified 1346.4979 0.49794766 3199 M0R177;Q9NYJ7-2;Q9NYJ7 DLL3 Delta-like protein 3 yes no 0 0 0 1 0 1 30.357 30.357 3 0.002635 6131 20230619_1880_Aki_TMTPro18x_K_F1 72.34 58.133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3078 3199 2934 5696 4711 4711 1 9606 Homo sapiens -0.16144139232528687 CELLYEGPPDDEAAMGIK Oxidation (M) 2022.8914 0.89144369 3447 P13639;Q8TA90;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 1 0 3 1.41 1 1 1 1 1 57.519 57.541 3 4.7726E-10 17625 20230619_1881_Aki_TMTPro18x_K_F2 139.49 130.08 203260 173190 176860 197940 180250 200420 187160 202200 243770 231700 224120 209840 242710 204300 205040 256680 243950 245240 187800 158750 182020 197940 187320 202570 190120 207190 244410 231970 231540 213930 245360 213720 211600 256300 233050 233050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 480430000 3079 3447 2935 5697;5698;5699;5700;5701 4712;4713;4714 4712 2085 3 9606 Homo sapiens -0.07908637149853348 CELLYEGPPDDEAAMGIK Unmodified 2006.8965 0.89652907 3447 P13639;Q8TA90;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 0 0 4.5 0.5 1 1 61.285 61.312 3 1.7956E-06 18835 20230619_1883_Aki_TMTPro18x_K_F4 102.58 92.478 117960 96065 109190 115050 100460 133520 115250 104270 139930 145850 134610 134410 155630 133420 126840 143320 148680 157400 109010 88113 111570 114860 105670 132900 116110 109690 141040 144880 139250 136890 156830 138230 130790 144610 142110 149320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252030000 3080 3447 2935 5702;5703 4715;4716 4715 2 9606 Homo sapiens -0.06664333287244517 CEMPELVQHK Unmodified 1269.5846 0.58457783 3873 Q14008-2;Q14008;Q14008-3;Q8IYN5;H0YCF6;H0YEK7 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 5 0 1 44.662 44.741 3 0.0055352 11524 20230619_1885_Aki_TMTPro18x_K_F5 81.865 69.098 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3081 3873 2936 5704 4717 4717 1 9606 Homo sapiens -0.039431079400173985 CEPIIMTVPR Unmodified 1214.6151 0.61514967 676 Q9ULV4-3;Q9ULV4-2;Q9ULV4;Q59EA2;A0A024RBI5;B3KN06;Q53G58;B4E3S0;B7Z9V0;H0YHL7;B3KRY9;B3KSZ9;J3QLV6;Q6QEF8-3;J3KSS5;Q6QEF8-2;Q6QEF8-4;Q6QEF8-5;Q6QEF8 CORO1C;CORO6 Coronin-1C;Coronin;Coronin-6 yes no 0 0 0 7 0 1 51.802 51.876 2 0.0013207 14424 20230619_1887_Aki_TMTPro18x_K_F7 109.02 85.228 332720 254210 286370 320410 312100 365220 358380 380400 456450 476740 449030 447410 515860 439390 351620 542510 526190 505930 307170 233350 295410 318730 323810 366190 361700 389960 459430 475770 463720 455350 516740 458960 371120 540900 501630 481000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178660000 3082 676 2937 5705 4718 4718 1 9606 Homo sapiens 0.016426704450395846 CEQEEEKEDLER Unmodified 1592.6624 0.66243003 2723 B9A6J2;Q15042;Q15042-3;D3DP75;A0A8J9AUI2;Q15042-4 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes no 0 0 1 1 0 1 37.87 37.87 3 3.8997E-05 9173 20230619_1880_Aki_TMTPro18x_K_F1 119.62 112.15 59577 47339 59281 61831 65294 66288 70167 69066 82585 78187 87439 78291 73537 75512 78184 81475 93281 73628 55077 43463 60348 61313 67441 66767 70852 70607 83593 78547 88823 79415 75818 78227 80266 81349 88969 70088 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65341000 3083 2723 2938 5706 4719 4719 1 9606 Homo sapiens -0.11019468331596727 CESAFLSK Unmodified 940.43242 0.43241751 1864 C9JXB8;A0A994J4A5;C9JNW5;V9HW01;P83731 RPL24;HEL-S-310 60S ribosomal protein L24 yes no 0 0 0 6.5 0.5 1 1 48.272 48.355 2 0.00013593 12808 20230619_1887_Aki_TMTPro18x_K_F7 175.38 135.27 1044400 850970 865610 843500 979270 1050900 1092700 1109800 1276900 1064500 713280 618980 1396400 814150 713060 1409000 1343600 1091700 964310 779220 895810 856010 1011600 1048800 1100400 1127800 1268900 1065300 786960 656790 1369500 866630 775560 1386200 1277700 1041200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 768830000 3084 1864 2939 5707;5708 4720;4721 4721 2 9606 Homo sapiens -0.04018140625260003 CESGFIEELPEETR Unmodified 1694.7458 0.74576573 181 U3KQF4;K7EIY6;A0A024R206;Q9BV68 RNF126 E3 ubiquitin-protein ligase RNF126 yes no 0 0 0 1 0 1 54.089 54.089 2 6.9278E-05 16055 20230619_1880_Aki_TMTPro18x_K_F1 113.22 99.318 12478 6803 11140 10850 8983.5 11320 9652.7 11968 12953 18696 14404 15436 15905 12395 13529 17776 14502 15925 11503 6271.7 11393 10629 9541.2 11418 9809.4 12350 13102 18421 14780 15703 16064 13177 13877 17660 13875 15140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24773000 3085 181 2940 5709 4722 4722 1 9606 Homo sapiens -0.07381731883720022 CFDCDQR Unmodified 999.35385 0.35384961 1082 B8ZZY2;A0A0S2Z444;A0A0S2Z3Y3;A0A0S2Z3Z1;A0A0S2Z462;P52594-2;P52594-3;P52594;P52594-4 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 yes no 0 0 0 2 0 1 34.462 34.519 2 0.038034 7489 20230619_1881_Aki_TMTPro18x_K_F2 91.626 89.76 26575 14340 27147 28431 34076 37260 31938 31605 42079 28195 41891 40386 39365 30143 31114 24937 42794 41056 24525 13263 27641 27640 34801 36851 32636 32592 42218 29076 42851 40091 39848 31188 32390 26068 40820 38831 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15911000 3086 1082 2941 5710 4723 4723 1 9606 Homo sapiens -0.1458531620201029 CFGTGAAGNR Unmodified 1009.44 0.4399625 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7 0.816 1 1 1 34.289 34.328 2 1.6094E-13 7228 20230619_1888_Aki_TMTPro18x_K_F8 224.51 216.17 183480 133510 175070 181750 206510 231400 221280 236260 278330 219440 244310 218540 249310 209070 198660 183330 283060 241930 169470 122670 179080 180230 212530 230260 224000 240450 278760 222770 252230 221590 251950 214750 207440 188000 269720 229320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 235140000 3087 3758 2942 5711;5712;5713 4724;4725;4726 4726 3 9606 Homo sapiens -0.0643798830498099 CFHQLMK Oxidation (M) 978.44154 0.4415424 3498 Q6FGU2;P23919;Q53F55;P23919-2;H7C312;H7BZ20 DTYMK Thymidylate kinase yes no 0 1 0 2 0 1 39.007 39.074 3 0.052995 9373 20230619_1881_Aki_TMTPro18x_K_F2 55.441 32.611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3088 3498 2943 5714 4727 4727 2166 1 9606 Homo sapiens -0.04854070540579869 CFIVGADNVGSK Unmodified 1265.6074 0.60742176 691 P05388;A8K4Z4;A0A024RBS2;F8VU65;P05388-2;Q53HW2;Q53HK9;F8VWS0;Q6NSF2;F8VPE8;G3V210;F8VRK7;F8VQY6;Q8NHW5;F8VZS0;F8VS58;F8VWV4 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 7.2 0.748 1 2 2 52.185 52.26 2;3 2.2643E-17 14467 20230619_1888_Aki_TMTPro18x_K_F8 224.75 169.08 410500 336370 367300 384990 379340 428230 425220 420890 451250 466850 436200 405450 513820 396410 397800 543580 486460 451680 379250 308380 377020 385490 394460 429640 426930 431660 457940 467480 451360 414390 516240 417110 412240 538310 464340 430110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2086499999.9999998 3089 691 2944 5715;5716;5717;5718;5719 4728;4729 4729 2 9606 Homo sapiens -0.014757655509129108 CFLVYSER Unmodified 1072.5012 0.50116577 864 A0A087WZ13;E9PAU2;Q8IY67-2;Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes no 0 0 0 7.5 0.5 1 1 50.629 50.707 2 0.0055634 13809 20230619_1888_Aki_TMTPro18x_K_F8 113.14 92.807 203650 163150 187440 198720 189520 238400 220110 219630 273350 229440 225190 225710 233290 205470 225490 233930 234270 244210 188160 149680 191910 198290 197860 237550 221770 225910 273440 231360 233690 228610 237540 214120 229970 235190 224130 231800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 125180000 3090 864 2945 5720;5721 4730 4730 1 9606 Homo sapiens -0.032184763255600046 CFNTLTNSFQPSLLGR Unmodified 1853.9094 0.90941744 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;P55265-3;P55265-2;A0A3B3ISU1;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 5 0 1 61.955 62.003 3 2.0406E-14 18794 20230619_1885_Aki_TMTPro18x_K_F5 173.03 159.61 134520 108610 119840 131820 142210 158350 154520 119250 176880 88703 72521 58035 84704 72465 87443 78452 88910 80579 124270 99634 123390 131520 146330 157220 155590 123830 174540 90608 79795 60868 86254 74634 88893 78895 84997 76543 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150650000 3091 1718;4020 2946 5722 4731 4731 1 9606 Homo sapiens 0.016619106778080095 CFSEENHEPLR Unmodified 1416.6092 0.60921267 4389 Q96QK1;Q53FR4;Q5HYM2 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 2 0.816 1 1 1 36.26 36.298 3 2.1124000000000003E-24 8208 20230619_1881_Aki_TMTPro18x_K_F2 233.45 219.29 104100 75331 95533 102380 117450 115110 122960 120850 152660 120140 126280 135420 140530 112100 123280 135180 151820 139190 96127 69219 98123 101330 120350 115580 124530 123050 152710 121970 131490 135980 142140 117650 127290 135660 144900 132210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 126810000 3092 4389 2947 5723;5724;5725 4732;4733 4732 2 9606 Homo sapiens -0.08242756532922613 CFSPGVIEVQEVQGK Unmodified 1675.824 0.82395647 1354 A0A2R8YEY5;A0A2R8YEZ4;Q96HT3;A0A2R8Y5D3;O15160-2;O15160 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes no 0 0 0 6 0 1 56.778 56.85 3 0.00097672 16827 20230619_1886_Aki_TMTPro18x_K_F6 74.475 59.914 44380 35779 37087 45261 43135 42754 53850 44252 43218 72381 79745 86563 95434 80116 57120 91161 85323 94588 40978 32836 38426 44890 44552 43480 53343 45895 46199 72022 80788 86999 95074 83439 60504 91522 81428 89770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46912000 3093 1354 2948 5726 4734 4734 1 9606 Homo sapiens 0.013077454921358367 CFSVLGFCK Unmodified 1116.5096 0.50962197 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 4.5 0.5 2 2 61.12 61.139 2;3 0.0008894 18785 20230619_1883_Aki_TMTPro18x_K_F4 99.802 83.911 160580 155160 130430 123640 183610 234470 180950 178090 269680 58593 52031 48301 56723 46255 71081 55386 50013 53210 148420 141760 135820 129040 186940 227400 185090 182550 260360 65792 63833 49552 58506 48284 70779 55444 48078 50550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259680000 3094 3444 2949 5727;5728;5729;5730 4735;4736;4737 4735 3 9606 Homo sapiens -0.04397245680547712 CGAALAGHQLIR Unmodified 1265.6663 0.66627404 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2 0.816 1 1 1 39.128 39.168 3 3.388E-13 9400 20230619_1881_Aki_TMTPro18x_K_F2 166.66 89.34 188680 160820 160330 160120 173130 182090 202870 160840 221970 212170 202220 193340 210080 177680 196980 239240 211230 201280 174300 147240 165430 162160 179610 182110 203290 167260 224300 211180 208710 196670 213550 187010 201560 237180 201890 191620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 498510000 3095 3758 2950 5731;5732;5733 4738 4738 1 9606 Homo sapiens 0.04406755534091644 CGAEDHVEAVK Unmodified 1213.5397 0.53973612 2406 C9J5N1;B3KSP9;Q9BTE6;Q9BTE6-2;Q9BTE6-3;K7EQ85 PTGES3L-AARSD1;AARSD1 Alanyl-tRNA editing protein Aarsd1 yes no 0 0 0 2.5 0.5 1 1 36.385 36.442 3 0.00022336 8097 20230619_1882_Aki_TMTPro18x_K_F3 109.24 99.048 47431 27295 40548 43711 47677 47959 42804 40477 58621 53878 74432 62662 68587 60903 48612 43030 80632 65449 43724 25157 41876 42821 48839 47998 43942 42244 59410 54034 75243 63152 69270 61959 51508 44815 76734 61982 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29111000 3096 2406 2951 5734;5735 4739 4739 1 9606 Homo sapiens -0.05849215481725878 CGAETQHEGLELR Unmodified 1498.6834 0.68344025 2113 B5MC98;A8K813;Q9HCU5;Q05DB2 PREB Prolactin regulatory element-binding protein yes no 0 0 0 2 0 1 35.832 35.889 3 2.3767E-36 8024 20230619_1881_Aki_TMTPro18x_K_F2 249.66 223.12 25273 19163 21300 24077 22253 27084 27696 26652 31956 31737 31384 33650 37300 33424 31881 43821 48907 46572 23328 17590 22006 23949 23218 27142 27735 27394 32300 31867 32501 34082 37660 35033 33517 43982 46613 44214 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34059000 3097 2113 2952 5736 4740 4740 1 9606 Homo sapiens -0.04595413441438723 CGDGAFLLTTTPR Unmodified 1407.6816 0.68164933 2614 B4DWI8;Q8WXF1;A0A024RDP4;Q8WXF1-2;X6RDA4 PSPC1 Paraspeckle component 1 yes no 0 0 0 7.67 0.471 1 2 52.92 52.993 2;3 3.0153E-12 14857 20230619_1888_Aki_TMTPro18x_K_F8 166.14 148.41 27213 23161 24768 27133 26234 31928 29705 26664 37872 29350 26657 28905 27722 25323 29658 29175 28048 28455 25151 21236 25405 27137 27268 31798 29985 27686 37655 29530 27948 29229 28368 26435 30033 29221 26855 27033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34046000 3098 2614 2953 5737;5738;5739 4741;4742 4742 2 9606 Homo sapiens -0.005884224593955878 CGDLEEELK Unmodified 1091.4805 0.48048991 3746;3405 P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72;K7EPB9;U3KQK2;Q5TCU3;P07951 TPM4;HEL-S-108;TPM2 Tropomyosin alpha-4 chain;Tropomyosin beta chain no no 0 0 0 1.5 0.5 1 1 49.732 49.761 2 8.738E-05 14246 20230619_1880_Aki_TMTPro18x_K_F1 157.68 125.46 + 524630 431970 425990 454350 472330 592480 645920 628090 786650 606310 622700 573120 649960 544160 524280 669320 609340 573860 484370 395720 442060 459100 492540 589360 645110 638380 786210 613290 647310 582730 656580 568820 540830 664890 581940 546190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 541690000 3099 3746;3405 2954 5740;5741 4743;4744 4743 2 9606 Homo sapiens -0.061591114958901017 CGDLLAASQVVNR Unmodified 1401.7034 0.70344741 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2;H3BPA9 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 7 0 1 50.64 50.721 2 1.4148E-10 13887 20230619_1887_Aki_TMTPro18x_K_F7 183.33 166.7 53268 48888 56210 61742 52847 65420 58304 60886 70296 74889 68502 59055 72691 61895 60179 74231 77399 74727 49315 44846 56845 61337 55368 65754 58864 62876 70912 74462 70473 60795 73480 64429 62440 74382 73870 70981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95515000 3100 4222 2955 5742 4745 4745 1 9606 Homo sapiens 0.01866382289199464 CGDLVFAK Unmodified 908.44259 0.44258826 2314 B2RDE8;A0A384NPW1;P51858;B7Z525 HDGF Hepatoma-derived growth factor yes no 0 0 0 7 0.816 1 1 1 51.884 51.96 2 0.010317 14379 20230619_1888_Aki_TMTPro18x_K_F8 109.01 70.774 174460 142300 155250 180490 175330 188830 180000 182710 216720 211730 209010 203920 223370 193720 164920 239660 236600 228450 161170 130600 159750 179220 180710 190190 182360 187850 218460 212220 215320 207090 224840 202570 173100 239250 225630 217140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 736820000 3101 2314 2956 5743;5744;5745 4746 4746 1 9606 Homo sapiens -0.015295329000309721 CGEALGLK Unmodified 846.42694 0.4269382 2144 X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9 GTF2I General transcription factor II-I yes no 0 0 0 6.5 0.5 1 1 46.122 46.208 2 0.033641 11848 20230619_1887_Aki_TMTPro18x_K_F7 83.265 40.018 105200 79369 103360 109100 107010 117090 115920 113130 151780 119280 121720 105370 131920 104510 102110 132630 145200 119510 97214 72926 105240 107820 111150 117690 117450 116020 151320 119890 126590 107670 132910 109360 106890 132000 138330 113750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137250000 3102 2144 2957 5746;5747 4747 4747 1 9606 Homo sapiens -0.0024181941707865917 CGEEIAVQFVDMVK Unmodified 1623.7637 0.7636644 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;A0A286YFA2;A0A286YFL2;Q9UMY2;Q8N5M8;A0A286YF78 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 5 0 1 64.036 64.082 3 0.022273 19793 20230619_1885_Aki_TMTPro18x_K_F5 55.66 44.221 77291 72515 67734 71956 61295 73479 62733 61248 75468 81081 91810 116850 96173 99465 117030 102500 108300 141650 71461 66368 69523 72770 64310 73947 63608 63994 76839 81972 93847 116320 99114 103290 118090 105190 103940 134010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138710000 3103 1334 2958 5748 4748 4748 1 9606 Homo sapiens -0.0232668816261139 CGEMAQAASAAVTR Oxidation (M) 1437.634 0.63404721 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32 VARS Valine--tRNA ligase yes no 0 1 0 4.5 0.5 1 1 35.064 35.134 3 0.00025785 7685 20230619_1885_Aki_TMTPro18x_K_F5 92.265 73.954 10499 8200.2 12519 13664 16428 16314 13199 16526 22954 15544 13659 19388 17472 15059 21012 14584 22017 17532 9721.3 7551.3 12611 13377 16668 16296 13797 16831 22453 15892 14666 19333 17888 15652 21320 14852 21025 16637 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23843000 3104 725 2959 5749;5750 4749 4749 435 1 9606 Homo sapiens -0.06726444721903135 CGEMAQAASAAVTR Unmodified 1421.6391 0.63913259 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32 VARS Valine--tRNA ligase yes no 0 0 0 7 0 1 43.756 43.837 3 5.4102E-07 10844 20230619_1887_Aki_TMTPro18x_K_F7 109.99 96.328 41626 36641 37937 37921 44106 45200 42973 38710 67184 50298 53040 46442 54160 43938 44235 59797 70192 50448 38481 33554 38932 38305 45323 45037 44117 40311 66459 50153 55067 47280 54794 46244 46666 59267 66772 48087 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58495000 3105 725 2959 5751 4750 4750 1 9606 Homo sapiens -0.054821408592943044 CGETGHVAINCSK Unmodified 1431.6235 0.62348253 1099 A0A0S2Z4Q3;A0A0S2Z4K2;P62633-2;P62633-8;P62633-5;P62633;P62633-4;P62633-6;P62633-7;P62633-3;Q6T598 CNBP Cellular nucleic acid-binding protein yes no 0 0 0 6 0 1 35.832 35.892 3 7.1085E-05 7947 20230619_1886_Aki_TMTPro18x_K_F6 107.53 76.657 22140 16739 19336 21883 26578 24901 23327 27462 29372 26320 32759 30514 31272 21735 23903 23000 30772 23429 20441 15372 19993 21716 26928 25017 23907 27832 29703 26782 33356 30487 31580 22795 24806 23126 29325 22275 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52821000 3106 1099 2960 5752 4751 4751 1 9606 Homo sapiens -0.07506427376301872 CGFAGETGPR Unmodified 1050.4553 0.45527821 2316 Q86TY2;V9GYX7;Q05DQ7;Q53HF6;Q53H79;B2RDG9;Q9NZ32;G3V524;G3V2Q5;G3V5Y4;F6S9Y6 ACTR10 Actin-related protein 10 yes no 0 0 0 4 0 1 36.683 36.728 2 0.0059341 8246 20230619_1883_Aki_TMTPro18x_K_F4 88.136 79.649 21628 18457 24136 25248 32781 37704 28127 35194 34817 31862 35892 36629 33865 29605 35859 31384 41494 36649 20023 16949 24448 25096 33256 37107 28855 36003 35131 32522 36697 36726 34733 30866 36712 31822 39613 34771 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32869000 3107 2316 2961 5753 4752 4752 1 9606 Homo sapiens -0.06793121507803335 CGFCHVGEEENEAR Unmodified 1692.6621 0.66205288 1028 A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0;Q5JRC6;Q8IWS0-4;Q8IWS0-2 PHF6 PHD finger protein 6 yes no 0 0 0 1.5 0.5 1 1 35.209 35.237 3 6.7106E-13 8081 20230619_1880_Aki_TMTPro18x_K_F1 193.15 188.26 40728 36485 44832 44087 49736 50760 51677 47028 50620 55341 54376 53692 56817 45100 47600 55489 54319 57337 37714 33457 45267 43994 51265 50754 51961 48532 51820 55423 55713 54285 57450 47377 48981 55675 51928 54429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181320000 3108 1028 2962 5754;5755 4753 4753 1 9606 Homo sapiens -0.1565716653240088 CGFLPGNEK Unmodified 1020.4699 0.46986564 892 Q86SZ7;Q2TNB3;A0A087X1Z3;Q9UL46;H0YM70;Q6FHK9;H0YKU2 PSME2 Proteasome activator complex subunit 2 yes no 0 0 0 7 0 1 47.762 47.851 2 0.001863 12601 20230619_1887_Aki_TMTPro18x_K_F7 111.82 64.003 182290 160870 152010 165490 187150 206250 227440 210990 262450 225910 218350 233520 259490 217820 196530 288730 293210 277830 168410 147310 157600 167370 192780 205650 227910 215600 263590 227830 227950 236270 260670 228960 206790 288100 279500 264060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59269000 3109 892 2963 5756 4754;4755 4755 2 9606 Homo sapiens -0.03955049359626628 CGFSLALGALPGFLLK Unmodified 1662.9167 0.91673465 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;A0A804HI02;B4DE53;A0A804HJU6;A0A0J9YVR1;A0A0J9YWI5;I3L439;I3L163;A0A0J9YYG2;A0A0J9YVU1;A0A0J9YY08 TBCD Tubulin-specific chaperone D yes no 0 0 0 7 0 1 66.497 66.52 3 0.00010556 20732 20230619_1887_Aki_TMTPro18x_K_F7 93.494 79.236 9014.9 7261.7 7910.2 7934.2 7426.7 6743.4 8636 8075.2 8813.2 7433.9 9605.9 8743 8259.8 9463.3 9308.5 8860 9114.5 10657 8326.5 6655.2 8118.2 7948 7774.5 6947.1 8644.7 8145.3 8990.5 7590.1 9756.9 8847.4 8538.2 9697.1 9434.6 9016.4 8733.3 10097 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18583000 3110 1722 2964 5757 4756 4756 1 9606 Homo sapiens 0.11179295016177093 CGGAGHIASDCK Unmodified 1231.5074 0.50739014 322;3094 H7C561;Q15637-6;A0A024R566;B4DJU4;Q15637;Q15637-2;Q15637-3;Q15637-4;A0A024R572;A0A024R588;A0A024R5D9;B4DSE4;Q15637-5;A0A7P0T9U7;Q15637-7;B4DX42 SF1 Splicing factor 1 no no 0 0 0 5 0 1 32.287 32.367 3 0.0087886 6547 20230619_1885_Aki_TMTPro18x_K_F5 69.721 57.928 6862.4 4526.6 5340.5 6926.4 8975.3 9089.7 8124.5 9957.6 8995.6 5744.2 8167.1 9483.3 8645.6 8146 10175 6224.5 10080 10801 6326.1 4166.8 5615.7 6822 9009.9 9043.7 8268.6 9994 9070.1 6147.1 8453.6 9409.4 8886.7 8346.4 10292 6555.2 9650.2 10207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3731500 3111 3094;322 2965 5758 4757 4757 1 9606 Homo sapiens -0.09910326156341398 CGHTNNLRPK Unmodified 1195.588 0.58802372 3737 P62987;Q3MIH3;M0R2S1 UBA52 Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 yes no 0 0 1 2 0 1 27.654 27.731 4 0.00028643 4896 20230619_1881_Aki_TMTPro18x_K_F2 126.71 106.87 79890 12562 76500 85321 98216 89713 104290 120690 134510 91400 77960 85361 120410 91156 56437 74723 138250 132100 73474 12229 78365 80113 100360 90960 105700 120290 133010 93813 84471 87073 118540 93147 63108 78498 131440 124890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31039000 3112 3737 2966 5759 4758;4759 4758 2 9606 Homo sapiens -0.0019467705112674594 CGLPYVEVLCK Unmodified 1336.6519 0.65192911 2042 Q53H22;A8K4H7;Q06203 PPAT Amidophosphoribosyltransferase yes no 0 0 0 1 0 1 61.148 61.148 3 2.5125E-06 18951 20230619_1880_Aki_TMTPro18x_K_F1 129.16 110.02 32627 30727 36534 30243 32421 27986 33511 32607 37760 44109 44713 48115 51515 42621 40679 52970 52619 55083 30228 28120 36674 30597 33960 28623 33881 33304 38545 44067 45859 48473 51845 44701 42283 53143 50247 52287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38773000 3113 2042 2967 5760 4760 4760 1 9606 Homo sapiens -0.002930777290430342 CGLQFLGNIASR Unmodified 1334.6765 0.67650438 4650 Q9UBB4;A0A1W2PQD2;Q9UBB4-2;Q7Z524 ATXN10 Ataxin-10 yes no 0 0 0 5 0 1 58.88 58.934 3 4.513E-07 17447 20230619_1885_Aki_TMTPro18x_K_F5 153.25 121.41 19904 16215 17458 16897 17811 17710 17984 18850 21424 18025 21799 16847 22870 20278 18837 21151 22007 23261 18386 14854 17935 17034 18473 17887 18238 19153 21633 18236 22356 17301 23122 20853 19414 21353 21035 22067 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16068000 3114 4650 2968 5761 4761 4761 1 9606 Homo sapiens 0.022553184686785244 CGMTTVLTLTGVSR Unmodified 1494.7534 0.75343407 141 A0A024R1I3;Q96GD0;B1AHD3;Q6ZT62-2;Q6ZT62 PDXP Pyridoxal phosphate phosphatase yes no 0 0 0 5 0 1 59.434 59.488 3 0.00012489 17708 20230619_1885_Aki_TMTPro18x_K_F5 95.854 88.815 19579 18217 20746 22205 18557 25926 22978 19636 28096 27435 23340 21049 24422 19752 23465 24583 28469 31004 18129 16704 20962 22140 19614 25779 23062 20711 28153 27129 24205 21611 24847 20699 24160 24977 27208 29370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15428000 3115 141 2969 5762 4762 4762 1 9606 Homo sapiens 0.025847489028137716 CGNQAAIMELDDTLK Unmodified 1677.7702 0.77020634 1200 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;P67775;B3KUN1;A0A8V8TQA1;Q6I9T8;A0A8V8TRB3;B3KQ51;A0A8V8TQU8;P67775-2;H0YC23;H0YBN9 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes no 0 0 0 5.5 1.12 1 1 1 1 59.471 59.512 3 4.919E-15 18076 20230619_1883_Aki_TMTPro18x_K_F4 192.65 162.67 99493 83729 95341 85438 84604 98798 92008 96893 116260 109630 99875 103650 130010 102710 96453 130980 117300 113200 91983 76678 96971 86401 89020 98879 93132 99424 116470 109970 104560 105490 130110 107490 100010 130070 112000 107720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1984999999.9999998 3116 1200 2970 5763;5764;5765;5766 4763 4763 1 9606 Homo sapiens -0.04156795001881619 CGNVNFAR Unmodified 936.42358 0.42358415 3347 O95218-2;O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes no 0 0 0 7.5 0.5 1 1 36.499 36.526 2 0.0026883 8069 20230619_1888_Aki_TMTPro18x_K_F8 126.2 116.22 73140 57974 60369 65274 91744 89038 82527 81967 124500 74482 74240 64094 70673 61806 68754 73486 86976 57356 67519 53149 62878 65643 92581 88110 84964 83994 122310 75484 78300 65509 72213 64424 70967 72759 82837 54756 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66793000 3117 3347 2971 5767;5768 4764 4764 1 9606 Homo sapiens -0.04717069471075774 CGSVLVR Unmodified 789.41671 0.41670786 3457 P15880;Q6IPX5;Q3KQT6;Q8N5L9;H0YEN5;Q8J014;E9PM36;I3L404;E9PQD7;E9PMM9 RPS2;rps2 40S ribosomal protein S2 yes no 0 0 0 5.33 3.09 1 1 1 36.614 36.632 2 0.0061408 8613 20230619_1880_Aki_TMTPro18x_K_F1 135.35 94.404 644400 520890 536330 567530 647300 725500 678600 686400 912290 721340 607530 597790 822990 641390 514540 821600 1019600 743030 594990 477370 555720 571580 665180 720860 689280 704570 904010 723990 646620 614260 818840 670030 558040 817400 968730 707580 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1077800000 3118 3457 2972 5769;5770;5771 4765;4766;4767 4765 3 9606 Homo sapiens 0.01357617648352516 CGVISPR Unmodified 787.40106 0.4010578 2214 I3L3P7;B2R4W8;P62244;A8K7H3 RPS15A;hCG_1994130 40S ribosomal protein S15a yes no 0 0 0 5.5 2.69 1 1 1 1 34.961 35.002 2 0.043322 7959 20230619_1880_Aki_TMTPro18x_K_F1 80.462 54.636 454610 332110 403020 416690 490650 519390 462340 504170 657860 521430 552210 508860 612130 491520 434300 487180 683300 560720 419680 304900 415040 415240 502270 517090 473840 516310 654630 526030 573560 516610 614480 507680 458690 493660 650520 532240 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 670280000 3119 2214 2973 5772;5773;5774;5775 4768;4769;4770 4768 3 9606 Homo sapiens -0.0011466886869584414 CGYAGSNFPEHIFPALVGR Unmodified 2090.9996 0.99962943 3690 P61160;P61160-2;A0A1B0GWD0;A0A1B0GWH0 ACTR2 Actin-related protein 2 yes no 0 0 0 3 0 1 59.73 59.759 3 4.5884E-31 18311 20230619_1882_Aki_TMTPro18x_K_F3 221.79 203.87 28606 21651 23597 31868 27468 36220 28668 26415 41963 30374 30194 34486 34762 26873 31763 40595 37730 44654 26401 19909 24502 31365 28342 36045 29227 27787 41500 30646 31760 34568 35188 28715 32732 40766 36090 42344 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77469000 3120 3690 2974 5776 4771 4771 1 9606 Homo sapiens -0.0022303999380710593 CHEDNVVVAVDSTTNR Unmodified 1814.8217 0.82172464 1528 Q13144;A0A3B3IUB1;A0A3B3IRP4;A0A3B3ITG6;A0A3B3ISX3;A0A3B3ISM8;A0A3B3IUF2;A0A3B3IS56;A0A3B3ISS1;A0A3B3ITQ2;A0A3B3ISV1;A0A3B3ISI2;A0A3B3IST9;A0A3B3ITK8 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes no 0 0 0 3 0 1 38.815 38.869 3 8.5703E-15 9130 20230619_1882_Aki_TMTPro18x_K_F3 148.24 141.97 15344 7985.2 12242 15462 19039 17913 16373 18547 19901 17775 23110 25651 21559 16548 18026 14992 21055 21429 14132 7383.9 12812 15017 19155 17936 16775 18879 20192 18238 23503 25353 21870 17299 18541 15464 20118 20283 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36483000 3121 1528 2975 5777 4772 4772 1 9606 Homo sapiens -0.05309334983599001 CHEFLIFEDR Unmodified 1364.6183 0.6183208 2076 A8K5J1;P11172;B5LY71;P11172-3;B5LY64;P11172-2;B5LY70;P11172-4;E9PFD2;B5LY67 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase;Orotidine 5'-phosphate decarboxylase yes no 0 0 0 3 0.816 1 1 1 51.291 51.339 3 0.0028709 14646 20230619_1883_Aki_TMTPro18x_K_F4 78.342 62.378 132790 105950 110020 112700 114550 146130 131820 129060 151280 132050 144500 145300 154500 127750 143370 152850 146430 145080 122590 97084 113770 113740 119320 144820 132510 133090 152690 133750 149030 146340 156810 133670 146200 152750 140070 137880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158310000 3122 2076 2976 5778;5779;5780 4773 4773 1 9606 Homo sapiens -0.04940363176615392 CHGVPLVTISR Unmodified 1237.6601 0.66012603 4008 Q53SW3;Q9BPU6 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 2.5 0.5 1 1 41.323 41.39 3 6.6889E-07 10208 20230619_1882_Aki_TMTPro18x_K_F3 135.8 117.53 42076 19097 37975 38921 30611 25792 30084 31638 34243 40811 40075 37455 36252 29110 31742 40659 39226 36496 38767 17689 38790 37483 32318 27208 30532 32180 34916 40625 40650 37896 36898 30918 32819 40414 37440 34719 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178020000 3123 4008 2977 5781;5782 4774 4774 1 9606 Homo sapiens 0.05080237302581736 CHIAVGSPGR Unmodified 1052.5185 0.51854717 4216 Q8TDR3;Q8IYV2;Q9UHI6;A0A7P0T9T8;Q8NEH0;A0A7P0T8G7;A0A7P0TB94;A0A7P0Z4I9;A0A7P0TBA6 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 0 0 0 8 0 1 30.735 30.745 3 0.00020758 5904 20230619_1888_Aki_TMTPro18x_K_F8 98.943 83.403 17181 6818.7 16599 14387 19618 16723 17243 20050 23511 17525 18001 17198 16903 11983 18295 15094 19085 15601 15832 6325.6 16934 13936 20048 16807 17723 20171 23363 17839 18677 17296 17339 12710 18603 15158 18228 14825 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16079000 3124 4216 2978 5783 4775 4775 1 9606 Homo sapiens -0.005611359998738408 CHTPPLYR Unmodified 1042.5018 0.50183447 3788 Q02543;B4DM94;M0R117;B4DM74;B4DUV3;Q53HD3;Q32XH3 RPL18A 60S ribosomal protein L18a yes no 0 0 0 5.33 3.09 1 1 1 32.333 32.365 3 0.0020419 6908 20230619_1880_Aki_TMTPro18x_K_F1 97.798 79.067 286490 87039 245820 264580 285830 246470 297640 291400 339280 287940 252860 222410 357870 252330 195850 359460 320660 283290 263560 81538 253730 252070 293630 251460 300630 294490 339940 289310 267700 230120 354020 265170 209780 354730 305340 270020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 718480000 3125 3788 2979 5784;5785;5786 4776;4777 4776 2 9606 Homo sapiens -0.017716368858600617 CHVIGTCSSDEK Unmodified 1391.5809 0.58094901 3141 J3QQQ7;J3KTQ8;Q4G1C4;Q8N4Q0-2;Q8N4Q0 ZADH2 Zinc-binding alcohol dehydrogenase domain-containing protein 2 yes no 0 0 0 4 0 1 34.948 34.998 3 0.0098667 7534 20230619_1883_Aki_TMTPro18x_K_F4 67.456 43.075 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3126 3141 2980 5787 4778 4778 1 9606 Homo sapiens -0.09917822504530704 CHVTIEK Unmodified 885.43784 0.43783723 4741 Q9Y4X5;Q59FM8 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes no 0 0 0 6 0 1 36.316 36.377 3 0.001735 8113 20230619_1886_Aki_TMTPro18x_K_F6 129.4 58.485 31811 18348 30353 33015 46075 32194 33846 38105 42724 37359 48779 44281 43888 35743 38102 34936 51969 43624 29349 16938 31179 32110 46157 32781 35127 38492 43246 38004 49505 44357 44670 37126 39588 35622 49532 41373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28172000 3127 4741 2981 5788 4779 4779 1 9606 Homo sapiens -0.009464170427918361 CIAAHQRPDK Unmodified 1194.5928 0.59277475 4465 Q9BXR0;B2RAR3;K7EPI1;K7ESP6 QTRT1 Queuine tRNA-ribosyltransferase yes no 0 0 1 7.5 0.5 1 1 29.841 29.903 4 0.00056337 5673 20230619_1888_Aki_TMTPro18x_K_F8 115.7 88.81 182270 71672 186740 181420 217590 195180 202270 204740 223490 198800 245240 255710 266910 222480 207400 136360 292300 275260 168030 66718 189690 174220 222790 196440 205560 208360 227280 202980 251550 255620 268900 226260 216190 146440 278730 260030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60064000 3128 4465 2982 5789;5790 4780;4781 4781 2 9606 Homo sapiens 0.003262070916207449 CIALAQLLVEQNFPAIAIHR Unmodified 2276.2463 0.24634206 724 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6UJC5;A0A140T9X9;A0A140TA18;H0Y400;H0YCC6 DDX39B;hCG_2005638 Spliceosome RNA helicase DDX39B yes no 0 0 0 6 0.816 1 1 1 64.476 64.513 3 5.3E-12 20220 20230619_1886_Aki_TMTPro18x_K_F6 142.4 124.26 13476 12163 11054 14435 13172 13087 13614 13086 14666 15630 15534 15047 17590 16715 14736 16540 18019 18674 12450 11151 11481 14371 13520 13344 13733 13442 14926 15645 15983 15360 17766 17175 15225 16740 17213 17712 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 249150000 3129 724 2983 5791;5792;5793 4782;4783 4783 2 9606 Homo sapiens 0.1592687450520316 CIDHYTK Unmodified 935.4171 0.41710179 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491;A0A7I2V4A5;H7BZR6;C9J9M4 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 6.5 0.5 1 1 36.874 36.94 3 0.00095069 8304 20230619_1886_Aki_TMTPro18x_K_F6 161.68 92.298 82861 40088 81073 91502 115350 117100 101790 103070 102810 92050 119420 125050 115740 96030 96535 56308 144980 130470 76410 37189 83074 88396 116650 116070 103460 105970 105310 94623 121600 124330 117340 98029 100930 61512 138150 123190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157020000 3130 832 2984 5794;5795 4784 4784 1 9606 Homo sapiens -0.05319007422451705 CIDLEPDNATTYVHK Unmodified 1774.8196 0.81959938 2627 B4DZ87;O94826;B3KQK0;B3KQK5 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 0 5 0 1 50.889 50.964 4 0.031667 14191 20230619_1885_Aki_TMTPro18x_K_F5 54.812 37.516 52620 54341 62400 66107 54666 80370 83125 67063 80770 76841 72769 75398 83215 73149 75019 89163 83927 91868 48811 49811 62530 65972 58254 79832 82041 69735 82095 77124 75528 76542 84239 76377 77001 89451 80269 87199 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200200000 3131 2627 2985 5796 4785 4785 1 9606 Homo sapiens -0.03681763721465359 CIELCCGSVK Unmodified 1224.5301 0.53009941 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 7 0 1 48.857 48.943 2 1.1002E-06 13125 20230619_1887_Aki_TMTPro18x_K_F7 178.22 136.11 39721 34520 36474 39258 47888 50908 59857 52890 60576 55598 53882 42698 61093 44803 38317 75735 71053 57709 36718 31640 37527 39422 49132 50648 59633 53957 61403 55667 55811 44108 61036 47801 41373 74478 67574 55052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36907000 3132 3387 2986 5797 4786 4786 1 9606 Homo sapiens -0.07318443083067905 CIELDER Unmodified 933.42258 0.4225811 4692 Q9UNS2;B4DN01;H7C3P9;Q9UNS2-2 COPS3 COP9 signalosome complex subunit 3 yes no 0 0 0 1.5 0.5 1 1 41.61 41.648 2 0.0084681 10827 20230619_1880_Aki_TMTPro18x_K_F1 120.62 35.262 87725 64542 82793 90768 87942 103070 97896 93089 114180 100300 115380 105730 114090 85572 92807 106890 130530 113040 81028 59323 84653 89636 91280 103020 98626 96002 115390 101180 118170 106450 115430 90126 96896 107380 124400 107360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96457000 3133 4692 2987 5798;5799 4787 4787 1 9606 Homo sapiens -0.04679328630629698 CIESLIAVFQK Unmodified 1306.6955 0.69550848 3537 P31949;V9HWH9 S100A11;HEL-S-43 Protein S100-A11;Protein S100-A11, N-terminally processed;Protein S100 yes no 0 0 0 4 0 1 64.569 64.579 3 3.8823E-05 20238 20230619_1883_Aki_TMTPro18x_K_F4 134.68 104.74 12651 12457 10347 20131 24294 31525 34372 33679 42535 49256 29682 32497 54075 31462 31756 59287 37671 44383 11695 11458 10998 19822 24448 31034 34268 34635 42448 48426 32125 33726 53265 34022 33166 58203 36033 42289 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84416000 3134 3537 2988 5800 4788 4788 1 9606 Homo sapiens 0.05442855039700589 CIGKPGGSLDNSEQK Unmodified 1588.7515 0.75151981 3153 K7EIT2;Q9Y5L4 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes no 0 0 1 7 0 1 42.429 42.504 3 1.3176E-07 10262 20230619_1887_Aki_TMTPro18x_K_F7 130.78 108.43 144250 110930 131350 124360 175200 197020 146450 148080 175440 165910 163170 140050 181380 122840 126230 176050 166650 124240 133230 101700 135110 125450 177850 192600 150230 155050 176690 166000 168550 142890 181740 130180 131820 173020 158770 118710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170040000 3135 3153 2989 5801 4789 4789 1 9606 Homo sapiens -0.019305885814219437 CIHPADIPAAR Unmodified 1219.6132 0.61317584 4214 Q8N9J5;Q8IYQ7 THNSL1 Threonine synthase-like 1 yes no 0 0 0 6 0 1 37.347 37.415 3 0.00026856 8506 20230619_1886_Aki_TMTPro18x_K_F6 84.06 50.194 51232 31435 39668 51021 61491 51701 53976 62625 74577 62887 66729 57474 75083 56383 47977 73336 65471 64516 47211 28968 41635 49897 61880 52492 55490 63193 74485 63393 69089 58622 75040 59122 50369 72854 62467 61375 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52424000 3136 4214 2990 5802 4790 4790 1 9606 Homo sapiens 0.01215377751395863 CIIPNHEK Unmodified 1009.5015 0.50150012 148;3549;1719 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH9;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 no no 0 0 0 6.5 0.5 1 1 38.185 38.255 3 7.5196E-05 8535 20230619_1887_Aki_TMTPro18x_K_F7 156.01 53.493 218630 170140 188160 190980 242990 246820 252740 246620 316630 284540 275790 282210 344630 260080 243220 361970 336800 315340 201870 155990 194520 191970 248310 245440 256130 252890 317380 285560 287810 285990 344620 274480 254920 359130 321190 300090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 495190000 3137 148;1719;3549 2991 5803;5804 4791;4792 4792 2 9606 Homo sapiens -0.0028705660569130487 CIIVEEGK Unmodified 946.47937 0.4793677 3684 V9HWA6;P60981;P60981-2;F6RFD5;B7Z9M9 HEL32;DSTN Destrin yes no 0 0 0 4 0.816 1 1 1 47.167 47.233 2 0.0010715 12871 20230619_1882_Aki_TMTPro18x_K_F3 162.5 87.761 442980 312260 351620 383340 411630 473680 443770 426740 579650 547180 561510 562160 675130 517900 410750 694590 701690 620570 408560 286650 365920 382450 424290 471030 449640 442380 582190 547210 581530 568770 672790 545180 439910 690140 668000 590510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 396700000 3138 3684 2992 5805;5806;5807 4793;4794 4793 2 9606 Homo sapiens 0.003987189258850776 CIIVMPEK Unmodified 988.50856 0.50855934 3548 P35520;P35520-2;B7Z2D6;B7Z6W5;Q9NTF0;C9JMA6 CBS;DKFZp727E011 Cystathionine beta-synthase yes no 0 0 0 8 0 1 54.226 54.298 3 0.027621 15436 20230619_1888_Aki_TMTPro18x_K_F8 64.265 33.035 169400 132000 155220 155630 148060 162190 155310 162520 183080 177430 181460 180860 203350 169860 180470 199990 184380 195680 156480 121070 158730 155370 154610 163550 157110 166390 184920 178640 187210 183120 205730 177180 184240 200200 176460 185860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60494000 3139 3548 2993 5808 4795 4795 1 9606 Homo sapiens 0.01384539950515773 CILAGDPAVGK Unmodified 1099.5696 0.56957969 4453 Q9BW83;I7FU17 IFT27 Intraflagellar transport protein 27 homolog yes no 0 0 0 7 0 1 50.813 50.89 2 0.00073172 13984 20230619_1887_Aki_TMTPro18x_K_F7 127.4 80.316 55132 43060 53899 55876 53583 70681 63427 61354 65863 69801 71411 72534 81693 61844 65711 76548 85562 79221 50955 39534 54882 55559 56031 70097 63464 63546 67214 70169 73455 73151 82255 64965 68250 76805 81629 75240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65247000 3140 4453 2994 5809 4796 4796 1 9606 Homo sapiens 0.023777682543141054 CILDLAHQWGEFK Unmodified 1615.7817 0.78169773 634 A0A024RAV0;P54687-4;P54687;P54687-5;P54687-3;P54687-2 BCAT1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 0 0 1 0 1 62.416 62.416 3 2.475E-06 19472 20230619_1880_Aki_TMTPro18x_K_F1 136.17 86.066 109660 96372 112080 113170 84498 108860 115630 112640 124580 142640 128600 138700 149620 129930 132110 168180 156010 176870 101470 88353 113270 112890 90893 110480 115100 115640 126680 142400 132750 140680 151250 136360 136170 168750 149180 167820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88832000 3141 634 2995 5810 4797 4797 1 9606 Homo sapiens -0.0015618512557011854 CILPFDK Unmodified 891.45242 0.45242467 816 A0A087WUN7;H0YJ40;G3V4X6;G3V2S9;Q9GZT3-2;Q9GZT3;H0YJW7 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes no 0 0 0 1 0 1 57.01 57.01 2 0.068933 17238 20230619_1880_Aki_TMTPro18x_K_F1 77.674 5.4406 207370 170190 200690 220150 173070 225740 229730 225700 232990 268200 244100 269570 296320 240230 237600 306240 292320 334160 191700 156220 204190 218280 183710 227750 228490 231740 237860 268730 252370 272550 297940 252380 246050 308010 279450 316940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187060000 3142 816 2996 5811 4798 4798 1 9606 Homo sapiens 0.002356551053480871 CILQDGR Unmodified 860.41744 0.41743614 2604 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q9UIS4;Q15182;P14678-2;P63162;P14678;P63162-2;P14678-3;Q53HE7;J3KRY3;S4R3P3 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated proteins B and B';Small nuclear ribonucleoprotein-associated protein N yes no 0 0 0 4.5 1.12 1 1 1 1 38.638 38.705 2 0.018398 8964 20230619_1885_Aki_TMTPro18x_K_F5 107.32 72.425 589010 453160 511160 551840 693850 716230 632100 589020 851400 705990 784930 757220 811300 627100 656450 843780 945430 811420 543840 415810 528660 551240 704790 709040 647420 613710 851960 709260 809170 762320 819750 662840 687160 842040 900860 771520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 746410000 3143 2604 2997 5812;5813;5814;5815 4799;4800 4800 2 9606 Homo sapiens -0.018355877026010603 CILVASPGFVR Unmodified 1217.6591 0.6590634 59 A0A024QZR3;B3KPC1;Q9BRX2 hCG_2002731;PELO Protein pelota homolog yes no 0 0 0 4 0 1 55.282 55.293 2 7.9049E-05 16342 20230619_1883_Aki_TMTPro18x_K_F4 139.74 105.57 57114 49911 54350 57085 50692 65174 57752 61204 65314 66039 62723 50595 59682 52165 63248 67633 62065 58154 52813 45748 55412 57180 53219 65186 58079 62906 66025 66019 64276 52173 61186 54573 64212 67177 59368 55350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19102000 3144 59 2998 5816 4801 4801 1 9606 Homo sapiens 0.058940229336712946 CIPALDSLTPANEDQK Unmodified 1770.8458 0.84581413 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 4 1.41 1 1 1 1 1 58.197 58.231 3 4.6467E-11 17652 20230619_1882_Aki_TMTPro18x_K_F3 152.16 137.74 301540 246260 386260 379290 289840 367990 393700 386100 420510 333580 376440 395030 423720 362600 424480 454840 404150 450990 279470 226500 383930 371890 311570 373080 391890 391940 424760 341940 390630 397390 430990 379920 430690 455290 387200 428220 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3695599999.9999995 3145 272 2999 5817;5818;5819;5820;5821 4802;4803;4804;4805 4802 4 9606 Homo sapiens -0.008774945499226305 CIPEIDDSEFCIR Unmodified 1652.7174 0.71744249 1837 Q9P1R6;A0A8V8TNA9;Q969U7-2;Q969U7;A0A8V8TMV1;K7ENR6;A0A8V8TP80 PSMG2 Proteasome assembly chaperone 2 yes no 0 0 0 3 0 1 60.479 60.507 2 0.022145 18626 20230619_1882_Aki_TMTPro18x_K_F3 89.827 83.167 24056 23447 25403 23051 22273 23775 22336 21761 29420 17080 17040 15741 23475 14813 21767 24485 19101 20423 22281 21456 25627 23343 23387 23958 22740 22254 29047 17500 18342 16040 23641 15842 22032 24212 18310 19436 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7009600 3146 1837 3000 5822 4806 4806 1 9606 Homo sapiens -0.08280753064673263 CISEVQANNVVLGQYVGNPDGEGEATK Unmodified 2847.3345 0.33450096 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4;Q0PHS1 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 5 0 1 59.117 59.171 4 2.3373E-20 17510 20230619_1885_Aki_TMTPro18x_K_F5 155.8 136.08 22325 19049 22036 20496 22542 28016 26383 22738 27336 28157 31620 34778 32551 26748 32355 36375 32381 33936 20647 17452 22414 20687 23499 27637 26405 23746 27967 28368 32309 34733 33173 28359 32930 36251 30992 32253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97456000 3147 1464 3001 5823 4807 4807 1 9606 Homo sapiens -0.015272910141447937 CIYFEAK Unmodified 929.43169 0.43168922 2639 B4E0B8;Q8TDN6;Q9NUW4;A0JLQ5 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog yes no 0 0 0 7 0 1 51.65 51.724 2 0.0050737 14351 20230619_1887_Aki_TMTPro18x_K_F7 119.89 66.421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3148 2639 3002 5824 4808 4808 1 9606 Homo sapiens -0.035849352743070995 CKAEHDQLLLNYAK Unmodified 1701.8508 0.85083993 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 LMNB1 Lamin-B1 yes no 0 0 1 8 0 2 46.218 46.256 3;4 1.1004E-05 11983 20230619_1888_Aki_TMTPro18x_K_F8 119.87 106.45 208050 179000 217680 203070 205900 220200 186660 171870 156720 215130 225380 143230 175480 107880 254110 105180 100180 70129 192520 164070 220000 203380 214110 220360 188600 180130 164340 212800 225450 147510 183860 112510 247690 104310 97134 67091 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 526690000 3149 3482 3003 5825;5826 4809;4810 4809 2 9606 Homo sapiens 0.027988541033437286 CLAENSLGSAR Unmodified 1176.5557 0.55572054 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;Q86SE4 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 5.5 0.5 1 1 40.042 40.133 2 4.3692E-18 9560 20230619_1885_Aki_TMTPro18x_K_F5 242.35 200.92 151220 117350 131190 145130 107560 99815 154130 157160 202800 201770 240900 267580 245240 194450 228190 238690 256800 253750 139630 107690 134650 143770 114810 105760 154240 157840 205270 203430 245720 266090 249250 205360 233970 239970 245400 240860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168730000 3150 2005 3004 5827;5828 4811;4812 4811 2 9606 Homo sapiens -0.025495092448181822 CLAFHDISPQAPTHFLVIPK Unmodified 2290.1932 0.19324386 1477 A0A384NPU2;P49773;D6REP8;D6RE99;H0YC49;D6RD60;A0A6Q8PGQ8 HINT1 Histidine triad nucleotide-binding protein 1 yes no 0 0 0 4 0 1 59.439 59.441 5 1.9416E-11 18151 20230619_1883_Aki_TMTPro18x_K_F4 137.44 123.98 52401 39260 42025 52636 36606 40797 43766 51295 47558 54487 51245 56190 59227 46769 51076 51339 57076 66460 48349 36063 43531 51896 38675 42388 43869 51761 48429 54909 52786 56611 59782 48842 52414 52361 54617 62930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123250000 3151 1477 3005 5829 4813 4813 1 9606 Homo sapiens 0.09975496722472599 CLATGPGIASTVK Unmodified 1273.67 0.67002202 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 2 0 1 49.586 49.645 3 6.5508E-05 14286 20230619_1881_Aki_TMTPro18x_K_F2 108.72 93.177 175130 143180 182690 172790 188010 186770 199180 184680 241480 197570 191330 187920 205330 160040 215570 222510 241880 231280 161990 131340 184950 172310 195030 187830 201450 189200 241540 198780 199320 190330 209570 169410 220510 223050 231100 219620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52833000 3152 3299 3006 5830 4814;4815 4814 2 9606 Homo sapiens 0.044133805172805296 CLCAIDIHNK Unmodified 1242.5849 0.58491218 4104 Q86TW5;Q6FII3;Q9UKR5 C14orf1 Probable ergosterol biosynthetic protein 28 yes no 0 0 0 7.5 0.5 1 1 45.562 45.625 3 0.00023849 11751 20230619_1888_Aki_TMTPro18x_K_F8 98.04 81.816 54186 48825 57143 45855 59146 54547 73002 65365 72905 73761 57609 48174 71589 56377 45517 91209 89817 76274 50159 44673 57765 46750 61530 54810 72769 66230 73729 73319 60352 50435 71418 59755 49435 90106 85414 72654 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118930000 3153 4104 3007 5831;5832 4816 4816 1 9606 Homo sapiens -0.026676882201400076 CLDEFPNLK Unmodified 1134.5379 0.53794521 3483 Q6FGJ9;P21266;B4E2J2 GSTM3 Glutathione S-transferase Mu 3 yes no 0 0 0 7 0 1 56.975 57.03 3 0.030224 16622 20230619_1887_Aki_TMTPro18x_K_F7 57.859 32.473 78959 65103 87617 82844 76817 76775 83648 85884 97457 103380 106100 99131 93596 89164 113500 110130 99467 126160 73081 59747 88076 82160 80753 78333 84428 87577 98872 103390 107900 100520 96912 93409 114290 111230 95490 119560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30803000 3154 3483 3008 5833 4817 4817 1 9606 Homo sapiens -0.023942244996760564 CLEEFELLGK Unmodified 1236.606 0.60602477 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4DDN4;Q3B7B9;H3BPE3;H3BPE4;H3BTY8 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 4.5 0.5 1 1 62.251 62.277 3 0.00042198 19305 20230619_1883_Aki_TMTPro18x_K_F4 89.047 68.832 115920 99018 100210 101370 91890 118990 110170 110850 112250 136160 124260 93224 142210 123010 112820 145320 144350 160200 107100 90677 103000 102480 96759 118810 110130 114440 114870 134960 127480 97742 143210 127170 117160 146390 137910 151940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 391310000 3155 12 3009 5834;5835 4818 4818 1 9606 Homo sapiens -0.0028139963965259085 CLEEQGLK Unmodified 975.46953 0.46953129 3468 P17812;A0A3B3IRI2;B4E1E0;P17812-2 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 3.5 0.5 1 1 44.749 44.808 2 0.0046878 11652 20230619_1883_Aki_TMTPro18x_K_F4 124.98 74.105 63541 52914 52916 62458 58705 71200 58246 62903 77905 79980 83646 89529 87092 65460 70417 86404 103450 82591 58680 48523 54784 62397 60623 71138 59383 65282 78508 80196 85713 89610 87960 69449 73798 86234 98517 78562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122370000 3156 3468 3010 5836;5837 4819 4819 1 9606 Homo sapiens -0.019184690794986636 CLEHLFFFK Unmodified 1239.6111 0.61105057 1033 Q06310;B7Z7J5;Q5STP9;A0A0S2Z4M5;J3JS71;A0A0G2JKR7;P28702-3;A0A0S2Z570;P28702;P19793;A0A5F9ZHH6;F1D8Q7;B6ZGT6;A0A087WZ88;B2R7C0;P48443;P19793-2;Q6P3U7;F1D8Q5 RXRB;RXRA;NR2B3;RXRG;NR2B1 Retinoic acid receptor RXR-beta;Retinoic acid receptor RXR-alpha;Retinoic acid receptor RXR-gamma yes no 0 0 0 3 0 1 62.069 62.098 3 0.020342 19273 20230619_1882_Aki_TMTPro18x_K_F3 66.27 41.927 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3157 1033 3011 5838 4820 4820 1 9606 Homo sapiens 0.0008294901360841322 CLELFSELAEDK Unmodified 1452.6806 0.68064628 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 0 3.57 1.59 1 1 1 2 1 1 63.599 63.623 2;3 3.7012E-25 20244 20230619_1881_Aki_TMTPro18x_K_F2 209.85 162.59 986690 741300 860080 901410 638960 836530 839570 857930 1053900 1262000 1040200 1204500 1495700 1197600 840880 1739400 1557900 1698800 910930 680250 881230 896530 688290 851180 841930 885820 1062700 1251900 1088100 1225300 1481300 1264700 911160 1733900 1484600 1613400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2537900000 3158 751 3012 5839;5840;5841;5842;5843;5844;5845 4821;4822;4823;4824;4825 4822 5 9606 Homo sapiens -0.027586816189568708 CLELFTELAEDK Unmodified 1466.6963 0.69629635 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7;Q58FF9 EL52;HSP90AA1;HSP90Af Heat shock protein HSP 90-alpha yes no 0 0 0 4.17 1.34 1 1 1 2 1 63.979 64.007 2;3 3.5728E-26 19754 20230619_1885_Aki_TMTPro18x_K_F5 269.33 220.91 347920 284390 313360 366140 284050 380480 338470 332360 397890 419340 396290 448380 484550 435910 362130 588560 547240 567960 321440 261040 321150 363110 299520 382380 340020 345300 402200 420100 410770 453580 486320 457990 381860 587110 521950 539590 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1262600000 3159 3177 3013 5846;5847;5848;5849;5850;5851 4826;4827;4828;4829 4829 4 9606 Homo sapiens -0.018383951018904554 CLEMDVEK Unmodified 1022.4413 0.44126763 3839 Q13177;A8K5M4;Q9Y6B5;A8KAN3;A0A024R5P0;Q13153-2;Q13153;B3KNX7;E9PM17;B7Z3K0;B7Z302;H0YCG5 PAK2;PAK1 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 0 0 0 3 0 1 49.714 49.79 2 0.0095388 14046 20230619_1882_Aki_TMTPro18x_K_F3 101.43 61.162 102200 80842 85084 94390 88721 98176 99234 97687 111200 133690 128630 140920 138260 111800 90139 160850 159950 155930 94351 74140 87966 94276 92203 99003 99835 100800 113430 133350 131590 141730 138550 118900 96749 160350 152340 148170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85404000 3160 3839 3014 5852 4830 4830 1 9606 Homo sapiens -0.06905535051089373 CLEPEGAAELR Unmodified 1243.5867 0.58668632 4514 Q9H4A4;A6NKB8;Q7RU04;A0A087WU27;A0A087WUS4 RNPEP Aminopeptidase B yes no 0 0 0 1.5 0.5 1 1 44.834 44.875 2 1.556E-08 12079 20230619_1881_Aki_TMTPro18x_K_F2 204.48 143.9 139820 116710 128690 133680 123850 143690 137130 124500 151730 161780 173340 167530 173950 154780 156490 179980 199930 175330 129220 107000 131620 133760 129470 144120 137970 129570 154650 161690 176810 169410 176770 161380 161950 180140 190700 166670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281410000 3161 4514 3015 5853;5854 4831;4832 4832 2 9606 Homo sapiens -0.025363559305560557 CLEWLIHR Unmodified 1125.5753 0.57533377 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;Q6P664 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 2 0 1 54.385 54.409 3 1.6195E-05 16338 20230619_1881_Aki_TMTPro18x_K_F2 170.66 124.2 25086 22961 20126 23594 20720 21265 25498 20946 25615 33788 22974 25120 32073 24776 26504 39161 34327 29887 23175 21022 20887 23755 21597 21695 25422 21777 26050 33186 24111 25881 32177 26335 27549 38563 32737 28501 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7028200 3162 2332 3016 5855 4833 4833 1 9606 Homo sapiens 0.017569115566175242 CLFQSPLFAK Unmodified 1209.6216 0.62161526 4198 Q86X55-1;Q86X55 CARM1 Histone-arginine methyltransferase CARM1 yes no 0 0 0 5 0 1 62.375 62.422 3 0.0016102 19020 20230619_1885_Aki_TMTPro18x_K_F5 88.681 69.583 91435 76144 85064 84045 76393 84965 82828 92999 91560 83481 79012 82289 82705 69216 77504 97676 90001 90387 84508 69782 86794 84296 80236 86054 83470 94173 92291 84827 81850 83181 84060 73331 79705 97226 85994 85926 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129740000 3163 4198 3017 5856 4834 4834 1 9606 Homo sapiens 0.025189316680325646 CLGNGNPPPEEFLFYLPGQPEGIR Unmodified 2700.3006 0.30062206 3867 Q13740-2;F5GXJ9;Q13740;B3KNN9;B4DX43 ALCAM CD166 antigen yes no 0 0 0 7 0 1 64.391 64.42 3 2.5469E-17 19830 20230619_1887_Aki_TMTPro18x_K_F7 136.56 116.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3164 3867 3018 5857 4835 4835 1 9606 Homo sapiens 0.01848377075384633 CLGPLVSK Unmodified 872.47897 0.47897377 2126 A8K8U1;Q86VP6;Q86VP6-2;F5H6I6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 3 0 1 50.981 51.051 3 0.0083113 14595 20230619_1882_Aki_TMTPro18x_K_F3 73.208 48.264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3165 2126 3019 5858 4836 4836 1 9606 Homo sapiens 0.03763343996695312 CLGPTCK Unmodified 834.37279 0.37279414 3551 Q05DK5;P35612-4;P35612-3;P35612;P35612-2;P35612-8;P35612-9;C9JTM0 ADD2 Beta-adducin yes no 0 0 0 8 0 1 40.156 40.145 2 0.046216 9537 20230619_1888_Aki_TMTPro18x_K_F8 83.801 22.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3166 3551 3020 5859 4837 4837 1 9606 Homo sapiens -0.05101734840297922 CLHEFVK Unmodified 931.45857 0.45857268 505 B7ZC39;A0A024R896;B7ZC38;Q9NR46;Q9NR46-2;Q71RA6 SH3GLB2 Endophilin-B2 yes no 0 0 0 8 0 1 43.203 43.213 3 0.048359 10794 20230619_1888_Aki_TMTPro18x_K_F8 60.972 42.913 62582 42363 66976 74305 81248 77859 77947 73005 73862 74595 90426 73849 81790 64261 88272 74119 66232 67593 57839 39062 67917 72402 83040 78335 78672 74987 76134 75273 91535 74742 83973 67141 88355 74018 63593 64264 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27314000 3167 505 3021 5860 4838 4838 1 9606 Homo sapiens -0.009898266631125807 CLHELVK Unmodified 897.47422 0.47422274 1734 Q9BT22;A0A804HJL6;A0A804HKX7;Q9BT22-2;A0A804HJQ1;A0A804HIG6;A0A804HKU4;A0A8V8TNA5;A0A804HJE3;C9J202;A0A8V8TLI2 ALG1;ALG1L2 Chitobiosyldiphosphodolichol beta-mannosyltransferase;Putative glycosyltransferase ALG1L2 yes no 0 0 0 7.5 0.5 1 1 41.862 41.896 3 0.0058537 10032 20230619_1887_Aki_TMTPro18x_K_F7 104.21 64.546 78766 44242 67834 68209 88069 89271 90385 86676 127800 81865 83670 84737 81327 71401 80304 88516 104920 91813 72606 40762 70123 67170 89968 88595 92082 88584 126170 83181 87824 85454 83102 74993 83074 88837 100060 87218 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45407000 3168 1734 3022 5861;5862 4839 4839 1 9606 Homo sapiens 0.021384598539270883 CLHPLANETFVAK Unmodified 1498.7602 0.76023401 3865 Q13642-4;Q13642-5;Q13642-1;Q53FI7;B7Z4B7;B7Z6U8;Q5JXI8;Q13642;A0A494C0D6;Q5JXI3;Q5JXH8;Q5JXH7;Q5JXI2;A0A0D9SFZ9;Q5JXH9;A0A0D9SFB0;A0A0D9SFI6;Q13642-3;Q5JXI0;A0A0D9SGB2 FHL1 Four and a half LIM domains protein 1 yes no 0 0 0 4.5 3.5 1 1 48.509 48.542 3 1.8485E-15 12887 20230619_1888_Aki_TMTPro18x_K_F8 194.7 162.07 498390 371310 505770 506380 366740 401470 476470 431170 512770 616300 602280 563140 612640 530410 581170 647130 604020 621330 460650 341150 511030 498960 394800 414640 475440 443690 524330 611160 613960 573070 623450 554380 593170 646820 577820 590350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 459640000 3169 3865 3023 5863;5864 4840;4841 4841 2 9606 Homo sapiens 0.030804298457042023 CLIATGGTPR Unmodified 1044.5386 0.53861391 1627 O95831;O95831-3;A0A6Q8PFM5;A0A6Q8PFE1;A0A6Q8PHJ9;A0A6Q8PHC0;A0A6Q8PFA7;A0A6Q8PFS4;A0A6Q8PFQ8;A0A7I2RLJ8;A0A6Q8PFW2;O95831-4;Q5RZA0;Q5RZ99 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 0 2 0 1 41.034 41.11 2 0.0064766 10330 20230619_1881_Aki_TMTPro18x_K_F2 105.94 78.798 103820 77606 99619 91635 85255 94288 102920 100660 115630 135490 150270 134440 147200 111660 124870 160410 166650 146090 95911 71196 101280 91481 90183 95312 103200 103320 118510 134980 152270 135850 149210 118560 129870 159500 158900 138980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80022000 3170 1627 3024 5865 4842 4842 1 9606 Homo sapiens 0.01812614940081403 CLICYDYDLCASCYESGATTTR Unmodified 2678.0757 0.075708778 4640 Q9P0J7 KCMF1 E3 ubiquitin-protein ligase KCMF1 yes yes 0 0 0 5 0 1 60.191 60.243 3 0.06451 17995 20230619_1885_Aki_TMTPro18x_K_F5 46.027 43.619 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3171 4640 3025 5866 4843 4843 1 9606 Homo sapiens -0.19620604843703404 CLIEILASR Unmodified 1073.5903 0.59031513 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;E5RJF5;E5RK63;A0A0S2Z301;E5RI05;A0A0S2Z377 ANXA6 Annexin A6;Annexin no no 0 0 0 2.67 0.471 1 2 61.898 61.918 2 0.00010698 19444 20230619_1881_Aki_TMTPro18x_K_F2 154.49 98.958 307180 282110 310200 344890 310870 367600 327530 309000 317540 382170 398680 384640 392470 378220 386680 460220 465120 511850 284280 258700 315090 343380 323390 368650 329110 321810 327590 382360 404940 390330 400840 394610 398060 463790 444590 485440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1608699999.9999998 3172 1062;1064 3026 5867;5868;5869 4844;4845 4844 2 9606 Homo sapiens 0.056463586339759786 CLIFPLIVTGQR Unmodified 1415.7959 0.79589123 878 E7EVY0;A0A384NLA7;A0A087X0L7;J3KNA0;Q15070-2;Q15070;Q2M1J6;C9JC63;Q15070-3 OXA1L Mitochondrial inner membrane protein OXA1L yes no 0 0 0 7 0 1 63.781 63.811 2 0.0033256 19559 20230619_1887_Aki_TMTPro18x_K_F7 121.5 88.561 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3173 878 3027 5870 4846 4846 1 9606 Homo sapiens 0.10462512093386067 CLKDEDPYVR Unmodified 1293.6023 0.60233638 1172;3819 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087WZQ6;A0A087WU93;K7ERB2;Q10567-4;Q10567-3;Q10567-2;Q10567;C9J1E7 AP2B1;DKFZp781K0743;AP1B1 AP-2 complex subunit beta;AP complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 1 4 0 1 42.453 42.497 3 0.024976 10608 20230619_1883_Aki_TMTPro18x_K_F4 68.132 53.677 105790 85461 105060 104570 102100 108940 123300 109250 118360 114240 134460 81913 104060 75390 130170 76504 73780 46673 97805 78406 106740 104120 106780 109860 122940 111750 121420 114200 135570 84527 108220 78083 128490 75406 70950 44745 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71262000 3174 1172;3819 3028 5871 4847 4847 1 9606 Homo sapiens -0.03272069413515055 CLKDEDPYVRK Unmodified 1421.6973 0.6972994 1172;3819 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087WZQ6;A0A087WU93;K7ERB2;Q10567-4;Q10567-3;Q10567-2;Q10567;C9J1E7 AP2B1;DKFZp781K0743;AP1B1 AP-2 complex subunit beta;AP complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 2 7 0 1 41.632 41.703 4 0.059484 9967 20230619_1887_Aki_TMTPro18x_K_F7 51.286 29.655 67424 62353 76203 73951 84693 74577 90687 75423 62699 88516 91795 51671 52801 37343 101110 33047 39122 20279 62463 57161 76780 73767 87194 75454 90236 77370 66694 87555 90936 53664 57267 38816 98161 32808 37901 19466 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44981000 3175 1172;3819 3029 5872 4848 4848 1 9606 Homo sapiens 0.0033186405764809024 CLLETLALAPHEEYIQR Unmodified 2055.0459 0.04591092 2019 A8K321;B4DZ55;Q6ZXV5-2;Q6ZXV5 TMTC3 Transmembrane and TPR repeat-containing protein 3 yes no 0 0 0 7 0 1 61.126 61.165 3 3.433E-06 18309 20230619_1887_Aki_TMTPro18x_K_F7 75.376 65.277 73274 53359 58608 61416 66314 79399 60210 60025 82551 51387 55074 45115 57174 46171 60920 55106 51107 52335 67596 48946 60885 61593 68242 78471 61744 62430 81651 52300 57836 46180 58446 48081 61309 55101 49002 49733 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 392290000 3176 2019 3030 5873 4849 4849 1 9606 Homo sapiens 0.06058980117677493 CLLTSAIYALQGR Unmodified 1464.7759 0.77588407 1819 Q6PGP7;A0A8V8TMA8;A0A8V8TMB2;A0A8V8TLS3;A0A8V8TLT2;A0A8V8TNJ4;A0A8V8TLU2 TTC37 Tetratricopeptide repeat protein 37 yes no 0 0 0 7 0 1 63.652 63.684 3 0.010052 19536 20230619_1887_Aki_TMTPro18x_K_F7 66.393 48.297 17192 12629 16465 18067 16473 15910 16087 14722 17177 19364 19982 20321 19215 18571 17161 22295 20422 21979 15881 11611 16790 17764 17083 16229 16283 15259 17562 19349 20337 20527 19554 19400 17696 22312 19519 20874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36298000 3177 1819 3031 5874 4850 4850 1 9606 Homo sapiens 0.06208716362743871 CLMEGAGDVAFVK Unmodified 1395.6527 0.65265739 2791 CON__Q0IIK2;CON__Q29443 yes no 0 0 0 5.5 0.5 1 1 58.967 59.027 3 3.1246E-06 17737 20230619_1886_Aki_TMTPro18x_K_F6 109.24 46.32 + 29061 21079 28599 32849 28870 40986 23619 25242 32470 21610 25901 25241 33216 24300 28363 31185 31349 37743 26849 19400 29122 32276 29920 40427 24410 26788 32292 22186 27197 25456 33416 25491 29109 31580 30010 35756 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180570000 3178 2791 3032 5875;5876 4851 4851 1 -0.029342830800260344 CLNVDWIP Unmodified 1015.4797 0.47970205 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 5.5 0.5 1 1 64.678 64.723 2 0.045226 20243 20230619_1886_Aki_TMTPro18x_K_F6 71.715 65.888 37538 34100 35659 37544 31175 38487 36358 42134 46557 45503 45344 39474 47574 41599 43875 46883 48182 49185 34720 31241 36327 37665 32929 38931 36699 42860 46808 45627 46636 40445 48318 43129 44935 47150 46065 46688 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85614000 3179 3598 3033 5877;5878 4852;4853 4853 2 9606 Homo sapiens -0.027418613542636194 CLQDNNWDYTR Unmodified 1483.615 0.61502633 4657 Q9UBU9;Q68CW9;A0A024R5A9;H0YDU0 NXF1;DKFZp667O0311 Nuclear RNA export factor 1 yes no 0 0 0 4 0 1 47.27 47.312 2 9.8254E-17 12747 20230619_1883_Aki_TMTPro18x_K_F4 229.53 206.21 43437 39934 40015 39829 40303 51246 50744 42650 46895 51167 51859 47417 55512 42796 52182 51322 56678 53782 40170 36553 40953 40403 42160 50763 50426 44406 48213 51142 53115 48161 56351 44781 53361 51579 54165 51067 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49765000 3180 4657 3034 5879 4854 4854 1 9606 Homo sapiens -0.10743658021283409 CLQNPSSDIR Unmodified 1188.5557 0.55572054 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 5 0 1 39.402 39.493 2 1.0634E-10 9303 20230619_1885_Aki_TMTPro18x_K_F5 162.34 129.22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3181 2863 3035 5880 4855 4855 1 9606 Homo sapiens -0.031015092448114956 CLQSGTLFR Unmodified 1080.5386 0.53861391 326 A0A024R5A3;A0A024R580;B2RDI5;P07384;E9PLX0;E9PJJ3;E9PLC9;E9PMC6;E9PJA6;E9PSA6;E9PQB3;E9PRM1;E9PIA9 CAPN1 Calpain-1 catalytic subunit yes no 0 0 0 3 0 1 48.182 48.261 2 0.089625 13371 20230619_1882_Aki_TMTPro18x_K_F3 60.717 36.924 103030 78341 95294 101840 99840 123860 122570 115710 147440 125730 136600 142930 146490 127190 129630 146240 162540 153620 95167 71935 97589 101190 104110 123340 122990 119050 148290 127120 141130 143790 148450 132710 134010 147030 155130 145870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29884000 3182 326 3036 5881 4856 4856 1 9606 Homo sapiens 0.0015661494005598797 CLQTLLDTK Unmodified 1090.5692 0.56924534 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 8 0 1 58.28 58.327 3 0.00021963 17118 20230619_1888_Aki_TMTPro18x_K_F8 123.75 93.136 28337 25499 34497 35312 28991 36047 37656 34681 37875 35218 36770 33974 35555 33672 33714 45165 41939 41196 26266 23416 34462 34859 30786 36346 37476 35554 38516 35535 37711 34573 36274 35332 34833 44944 40042 39173 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148400000 3183 2863 3037 5882 4857 4857 1 9606 Homo sapiens 0.02758348534439392 CLREEIHK Unmodified 1083.5495 0.54951295 398 A0A024R6I3;Q53GF9;P49755;G3V2K7;B4DL12 TMED10 Transmembrane emp24 domain-containing protein 10 yes no 0 0 1 6 0.816 1 1 1 36.294 36.367 4 0.018143 8083 20230619_1886_Aki_TMTPro18x_K_F6 76.827 51.972 300470 227630 263010 276280 372150 366390 379150 366940 450800 346230 394530 393830 406550 345200 367660 420990 465350 395690 277420 208870 272010 276240 377910 363760 383890 374200 452620 352670 407950 396190 412840 361610 380190 420300 443820 376350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 418590000 3184 398 3038 5883;5884;5885 4858;4859 4859 2 9606 Homo sapiens 0.011080173143227512 CLSAAEEK Unmodified 906.41168 0.41168206 1095 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;A0A494C0P6;Q6LDX7;Q8NI98;A0A024R4K5 TPM3;DKFZp686J1372;TPM3-ROS1;OK/SW-cl.5;hCG_1787567 Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor yes no 0 0 0 3 0 1 40.687 40.746 2 0.002495 9931 20230619_1882_Aki_TMTPro18x_K_F3 137.9 81.782 80826 38354 107200 105050 132820 146070 109800 128830 122420 97323 135060 155000 119840 110890 117150 63523 151600 145540 74744 35715 107070 101010 135250 144040 112530 131910 124400 101800 137450 153060 122740 113380 120760 69376 144670 137390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80627000 3185 1095 3039 5886 4860 4860 1 9606 Homo sapiens -0.04526731004921203 CLSDPAEGCR Unmodified 1163.4699 0.469942 4200 Q86Y56;Q86Y56-2 DNAAF5 Dynein assembly factor 5, axonemal yes no 0 0 0 2 0 1 37.065 37.126 2 0.012359 8554 20230619_1881_Aki_TMTPro18x_K_F2 73.248 66.042 16232 13046 17901 15953 24802 23406 21353 23882 22123 17305 20761 19097 20591 14785 15768 21386 30571 22933 15020 11970 18133 15978 25085 23120 21761 24171 22429 17896 21341 19183 20793 15757 16963 21451 29054 21794 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11574000 3186 4200 3040 5887 4861 4861 1 9606 Homo sapiens -0.10525417421945349 CLSEQIADAYSSFR Unmodified 1645.7406 0.74062078 955 A0A0A0MSK5;Q5JTV8;Q5JTV8-3;J3KN66;H0Y4R4 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 0 0 0 7 0 1 61.528 61.567 3 4.2159E-06 18474 20230619_1887_Aki_TMTPro18x_K_F7 100.11 80.437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3187 955 3041 5888 4862 4862 1 9606 Homo sapiens -0.05641990955723486 CLSLSAGQTTLSR Unmodified 1392.7031 0.70311306 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3;Q9BTE3-3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 0 2.5 0.5 1 1 47.554 47.634 2 5.8928E-15 13073 20230619_1882_Aki_TMTPro18x_K_F3 197.07 148.79 36751 27736 34894 36091 35037 40095 36183 31582 40355 46100 38615 39554 44683 37546 35678 49685 41469 41877 33952 25469 35609 35805 36431 40044 36545 33254 40863 45619 39967 40378 44986 39435 36836 49257 39624 39856 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21478000 3188 1140 3042 5889;5890 4863;4864 4864 2 9606 Homo sapiens 0.02246962569347488 CLSSLKDER Unmodified 1106.539 0.53900784 3630 P52209-2;P52209;B4E2U0;B4DL86;B4DV68;A9Z1X1;K7ELN9 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 1 7 0 1 41.536 41.607 3 1.6338E-05 9925 20230619_1887_Aki_TMTPro18x_K_F7 178.55 163.77 441570 373780 441920 444120 710710 656380 594660 587550 633760 530510 562940 408720 406840 290430 524110 297170 287330 137130 408390 342760 452830 445550 712760 646360 607330 603160 640410 535610 573250 416550 425020 303920 516530 290500 276170 132490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 267930000 3189 3630 3043 5891 4865 4865 1 9606 Homo sapiens -0.010000101307468867 CLTPLVPEDLRK Unmodified 1439.7806 0.7806351 577 A0A024R9J0;O60216;A0A8I5KWV3 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 0 1 1 0 1 53.66 53.66 3 0.00023479 15857 20230619_1880_Aki_TMTPro18x_K_F1 97.594 71.152 92895 89817 94140 91566 72342 95616 97909 90802 101680 94170 89793 85180 110080 84457 88534 109860 101170 98344 86004 82213 95207 92448 77658 96279 97369 93214 102900 94745 93540 86916 110630 88525 91219 109280 96657 93540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97646000 3190 577 3044 5892 4866 4866 1 9606 Homo sapiens 0.07833600505523464 CLTQSGIAGGYKPFNLETCR Unmodified 2271.0776 0.077621754 2734 C9J0K6;P30626-2;P30626;P30626-3;B4DHQ6 SRI Sorcin yes no 0 0 1 3.5 0.5 1 1 54.928 54.958 3 7.670100000000001E-30 16223 20230619_1883_Aki_TMTPro18x_K_F4 209.43 191.14 148020 132400 151930 148300 139880 133270 147650 150320 133530 166020 151070 120250 139630 113990 151080 164350 157220 104340 136980 121330 153760 148360 146210 136410 148100 152800 137720 165450 153520 124070 143390 120420 153830 160970 150000 99930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 294650000 3191 2734 3045 5893;5894 4867;4868 4868 2 9606 Homo sapiens -0.0070739519073868 CLVGEFVSDALLVPDK Unmodified 1760.9019 0.90187244 1165 A0A218KGR2;P05067;P05067-8;P05067-11;E9PG40;A0A140VJC8;P05067-4;A0A0A0MRG2;P05067-9;P05067-7;P05067-6;P05067-10;B4DGD0;B4DJT9;B4DQM1;H7C0V9;P05067-3;P05067-5;P05067-2 APP Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes no 0 0 0 6.5 0.5 1 1 65.006 65.042 3 0.00042416 20121 20230619_1887_Aki_TMTPro18x_K_F7 81.311 55.163 13388 12774 17575 16462 15683 22246 20693 15231 19187 13607 25145 27639 21379 17776 21429 16173 25974 31414 12425 11719 17480 16392 16592 21880 20522 16028 19821 14277 25374 27078 21938 18592 22012 17145 24846 29655 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181550000 3192 1165 3046 5895;5896 4869 4869 1 9606 Homo sapiens 0.051857583575383615 CLVLTGFGGYDK Unmodified 1328.6435 0.64347291 178 A0A024R1Z6;Q99536;Q99536-3;K7ERT7 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes no 0 0 0 2 0 1 61.138 61.149 2 1.2924E-17 19085 20230619_1881_Aki_TMTPro18x_K_F2 185.77 145.72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3193 178 3047 5897 4870 4870 1 9606 Homo sapiens -0.0077030837403526675 CLVVDEADR Unmodified 1075.4968 0.49680868 3008 G3V529;Q9GZR7;B4DM03;B4DKV2;Q9GZR7-2;Q59FS7;A0A1W2PRR2;F5GYL3;B4E300;Q7Z4W0;A0A087WXU8;Q7Z4X3 DDX24 ATP-dependent RNA helicase DDX24 yes no 0 0 0 1.5 0.5 1 1 42.735 42.775 2 0.00011562 11330 20230619_1880_Aki_TMTPro18x_K_F1 153.08 107.71 66997 45737 54963 70784 67847 79141 72152 72695 85143 73807 68093 69775 87047 67192 65652 86956 83939 81157 61794 42101 57134 69475 69648 79200 72877 74740 85337 74444 71491 70956 87202 70472 68259 86676 80116 77155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100480000 3194 3008 3048 5898;5899 4871 4871 1 9606 Homo sapiens -0.037919855391237434 CLYALEEGIVR Unmodified 1321.67 0.67002202 4641 Q9P0M9;D6RAN8;H7C5U8 MRPL27 39S ribosomal protein L27, mitochondrial yes no 0 0 0 5 0 1 59.667 59.72 2 2.1635E-08 17783 20230619_1885_Aki_TMTPro18x_K_F5 189.38 162.49 71008 57186 70930 77846 66278 73910 76454 77524 83300 76822 72268 71769 87734 73714 71487 79809 87239 81529 65652 52524 72032 76857 69487 75105 76725 78942 84052 77538 75336 73163 88291 76314 73887 80183 83278 77439 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9994300 3195 4641 3049 5900 4872;4873 4873 2 9606 Homo sapiens 0.022053805172845387 CLYASVLTAQPR Unmodified 1377.7075 0.70747015 3447 P13639;Q8TA90;B4DPU3 EEF2 Elongation factor 2 yes no 0 0 0 3.5 0.5 1 1 53.516 53.552 2 9.8098E-13 15579 20230619_1883_Aki_TMTPro18x_K_F4 204.52 158.51 328610 282290 295380 325170 274130 354360 344460 318220 381650 269070 265410 218120 229150 200300 290630 292240 274830 211730 303700 258770 302770 325270 288810 355190 344270 326390 381660 273260 276030 223460 238050 211950 293580 287720 262670 202190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1615099999.9999998 3196 3447 3050 5901;5902 4874;4875 4875 2 9606 Homo sapiens 0.03372471782881803 CMALAQLLVEQNFPAIAIHR Unmodified 2294.2028 0.20276269 3204 O00148;B4DX78;Q69YT6 DDX39A;DKFZp547B159 ATP-dependent RNA helicase DDX39A yes no 0 0 0 5 0 1 64.493 64.538 3 9.730100000000001E-55 19968 20230619_1885_Aki_TMTPro18x_K_F5 268.2 250.1 20123 13154 18511 16848 14576 15255 16448 16910 21102 19077 19826 18177 23899 18747 19585 24673 23625 25436 18571 12085 18864 16699 15508 15588 16630 17221 21182 19143 20565 18532 24051 19644 20243 24724 22578 24144 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77219000 3197 3204 3051 5903 4876 4876 1 9606 Homo sapiens 0.10742941736407374 CMDVYTPK Oxidation (M) 1028.4307 0.43070295 3202 P67870;Q5SRQ6;N0E4C7;A0A1U9X7J2;A0A7I2YQ78;Q5SRQ3 CSNK2B;CSNK2B-LY6G5B-1181 Casein kinase II subunit beta yes no 0 1 0 5 0 1 41.275 41.36 2 0.014607 10103 20230619_1885_Aki_TMTPro18x_K_F5 89.752 82.355 52311 29689 36119 47689 50086 50924 47556 46163 60621 53271 67780 58929 61604 53329 49519 66512 68463 66819 48154 27366 38310 46679 50882 51129 48490 47693 61260 53654 68849 59438 62516 55886 51707 66592 65310 63468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31307000 3198 3202 3052 5904 4877 4877 1881 1 9606 Homo sapiens -0.08237517705515529 CMDVYTPK Unmodified 1012.4358 0.43578832 3202 P67870;Q5SRQ6;N0E4C7;A0A1U9X7J2;A0A7I2YQ78;Q5SRQ3 CSNK2B;CSNK2B-LY6G5B-1181 Casein kinase II subunit beta yes no 0 0 0 7 0 1 46.914 47.002 2 0.024976 12197 20230619_1887_Aki_TMTPro18x_K_F7 84.568 77.715 56597 42484 46533 60806 57556 58141 62681 55785 75769 74314 79096 77438 83801 67886 72873 90077 90955 95126 52230 39054 48358 59828 59047 58946 63278 57684 76587 74220 81181 78176 84854 71542 75388 90385 86879 90282 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35763000 3199 3202 3052 5905 4878 4878 1 9606 Homo sapiens -0.06993213842906698 CMIDQAHQEERPIR Unmodified 1781.8301 0.83012126 3173 K7ERF1;Q9UBQ5;K7ES31;Q9UBQ5-2;U3LUI4;A0A087WVB9;K7EQM4 EIF3K Eukaryotic translation initiation factor 3 subunit K yes no 0 0 1 3.5 0.5 2 2 34.971 35.027 3;4 2.4017E-08 7540 20230619_1883_Aki_TMTPro18x_K_F4 154.65 134.81 105970 63618 106470 117870 140360 145040 123800 126990 148570 127360 149840 138800 142870 128540 130650 113410 147540 130880 97829 58742 108680 114820 142620 144120 126560 130980 149940 129110 153280 140030 145500 132120 133890 115280 140890 124190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 242520000 3200 3173 3053 5906;5907;5908;5909 4879;4880 4880 2 9606 Homo sapiens -0.029520595479880285 CMLDAALATLNTHGK Unmodified 1614.7858 0.78579683 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 3 0 1 61.117 61.146 3 6.844499999999999E-19 18882 20230619_1882_Aki_TMTPro18x_K_F3 202.58 182.97 48795 36603 48858 43312 37969 51364 44081 45511 53036 55125 50605 46950 54082 47163 50640 63858 58579 61041 45097 33580 49435 43314 40552 51176 44400 47141 53456 54957 52165 48073 54943 49528 52067 63701 55989 57998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145480000 3201 2863 3054 5910 4881 4881 1 9606 Homo sapiens 0.002995363058289513 CMMAQYNR Oxidation (M) 1088.4202 0.42015503 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;H0YGI8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 1 0 7.5 0.5 1 1 33.467 33.506 2 0.017092 6644 20230619_1887_Aki_TMTPro18x_K_F7 86.838 79.167 76326 65232 63725 58484 85768 96450 75143 71924 113820 18052 18226 14449 13783 12801 47702 15834 21247 13880 70499 59675 66080 60163 87184 94113 77483 73723 109640 21240 23040 14836 15857 13415 46269 15858 20534 13231 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45549000 3202 2088 3055 5911;5912 4882 4882 1311 1 9606 Homo sapiens -0.12051823631622938 CMPTFQFFK Oxidation (M) 1220.5358 0.53583672 3097 H9ZYJ2;P10599;P10599-2 TXN Thioredoxin yes no 0 1 0 3.5 0.5 1 1 59.611 59.627 3 0.0004706 18147 20230619_1883_Aki_TMTPro18x_K_F4 108.98 90.197 138180 139500 123880 114610 224090 262200 172920 174060 287690 28646 25080 29075 31212 24735 58293 28031 25980 24389 127850 127470 128510 119800 223860 251930 180570 179900 275330 37371 38423 29464 33045 25834 56847 28015 25159 23209 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104630000 3203 3097 3056 5913;5914 4883;4884 4884 1799 2 9606 Homo sapiens -0.06560976509126704 CMPTFQFFK Unmodified 1204.5409 0.5409221 3097 H9ZYJ2;P10599;P10599-2 TXN Thioredoxin yes no 0 0 0 4.5 0.5 1 1 62.646 62.672 3 2.4284E-05 19139 20230619_1885_Aki_TMTPro18x_K_F5 157.91 129.51 344430 282150 283000 251680 358820 650400 331010 339710 589320 83653 66928 87775 96318 80736 159220 94248 104340 101510 318010 258140 293850 261870 368730 619650 342880 361380 563310 99773 94768 88853 100590 84248 157400 95111 100340 96351 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 385180000 3204 3097 3056 5915;5916 4885 4885 1 9606 Homo sapiens -0.05316672646495135 CMQLTDFILK Oxidation (M) 1283.6254 0.62538001 1898 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 RPL14 60S ribosomal protein L14 yes no 0 1 0 1 0 1 61.51 61.51 3 0.001342 19106 20230619_1880_Aki_TMTPro18x_K_F1 87.568 51.609 80455 64513 79010 64712 76591 72933 70499 76357 74950 81147 60167 63402 87869 58899 65418 103510 87599 92885 74374 59083 80227 65531 79496 73276 71630 77856 75650 81189 63655 65069 87664 63344 68352 102570 83637 88316 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268220000 3205 1898 3057 5917 4886 4886 1214 1 9606 Homo sapiens -0.005087666203962726 CMQLTDFILK Unmodified 1267.6305 0.63046539 1898 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 RPL14 60S ribosomal protein L14 yes no 0 0 0 2.5 0.5 2 2 63.236 63.255 2;3 0.00041806 20055 20230619_1881_Aki_TMTPro18x_K_F2 139.96 100.25 204030 162050 195440 185520 124920 208270 189700 178980 188500 212610 121350 135890 228410 157990 138510 244010 230380 239970 188560 148580 198210 185790 137610 208060 187520 185770 189810 210760 132410 142210 225350 167060 148070 243220 219600 227930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1393700000 3206 1898 3057 5918;5919;5920;5921 4887;4888 4887 2 9606 Homo sapiens 0.007355372422125583 CMSSTPAGSIEAQAR Oxidation (M) 1580.6923 0.69229037 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-5;Q59FV9 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 1 0 4 0 1 37.177 37.22 3 0.0066736 8435 20230619_1883_Aki_TMTPro18x_K_F4 65.942 60.764 12970 8697.4 13209 12018 15765 12843 13191 14007 16723 14012 18818 13711 15218 13755 14824 14692 16619 17573 11981 7995.9 13421 11878 16073 12961 13567 14225 16905 14157 19014 13957 15632 14240 15180 14911 15890 16656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36448000 3207 3847 3058 5922 4889 4889 2521 1 9606 Homo sapiens -0.07482807867245356 CMTNTPVVVR Unmodified 1175.5791 0.57909852 540 P32322-3;P32322;A0A024R8U9;E7D7X9;P32322-2;A0A1B2JLU7;E7D7Y0;E2QRB3;J3QKT4;J3KQ22;B7Z8T1;J3QL24;J3QL32;J3QL23;J3QLK9;J3QR88;J3KSA9 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase yes no 0 0 0 3.67 3.09 1 1 1 42.138 42.139 2 1.0978E-05 11023 20230619_1880_Aki_TMTPro18x_K_F1 165.15 145.45 140150 110670 121140 125550 79606 103540 111880 117290 134390 145240 162400 210470 171670 144040 176180 183790 209390 212060 129420 101460 124050 125350 87046 106690 111730 119690 136760 147180 166070 208290 175140 152860 180940 185600 200040 201100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98425000 3208 540 3059 5923;5924;5925 4890;4891;4892 4890 3 9606 Homo sapiens -0.0016678673182468629 CMTNTPVVVR Oxidation (M) 1191.574 0.57401314 540 P32322-3;P32322;A0A024R8U9;E7D7X9;P32322-2;A0A1B2JLU7;E7D7Y0;E2QRB3;J3QKT4;J3KQ22;B7Z8T1;J3QL24;J3QL32;J3QL23;J3QLK9;J3QR88;J3KSA9 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase yes no 0 1 0 7.5 0.5 1 1 36.518 36.545 2 0.0007042 7896 20230619_1887_Aki_TMTPro18x_K_F7 115.13 103.77 101480 83485 90286 85859 83500 76047 94246 87632 102140 105500 132030 144640 120110 107670 135640 136530 157090 154250 93755 76466 92492 86473 87455 78010 94688 89260 104770 106810 133660 143800 123760 113780 138840 137720 150080 146330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 160230000 3209 540 3059 5926;5927 4893;4894 4893 315 2 9606 Homo sapiens -0.014110905944562546 CMTTVSWDGDK Oxidation (M) 1314.522 0.52203715 3420 P09455;A0A0A0MQT0 RBP1 Retinol-binding protein 1 yes no 0 1 0 4 0.816 1 1 1 46.557 46.623 3 2.9657E-05 12430 20230619_1883_Aki_TMTPro18x_K_F4 134.75 130.97 142060 137530 145260 160540 113300 121380 161320 171670 175800 159980 163160 151660 171790 135630 164300 174700 177820 174930 131540 126040 146910 159810 121450 126910 160370 171600 177710 162000 168330 153900 174650 142570 168010 174910 169980 166160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 447880000 3210 3420 3060 5928;5929;5930 4895 4895 2037 1 9606 Homo sapiens -0.12264298798868367 CMTTVSWDGDK Unmodified 1298.5271 0.52712253 3420 P09455;A0A0A0MQT0 RBP1 Retinol-binding protein 1 yes no 0 0 0 5 0.707 1 2 1 51.541 51.617 2;3 1.3406E-16 14413 20230619_1885_Aki_TMTPro18x_K_F5 224.64 171.93 156650 130800 161010 147150 114870 151750 174620 180910 171760 197470 191840 214320 240530 191700 205840 220710 246050 240520 144900 119890 162470 147460 124690 153740 172600 183210 176080 199090 198190 215980 242230 200110 212210 222400 234990 228250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 440050000 3211 3420 3060 5931;5932;5933;5934 4896;4897;4898 4898 3 9606 Homo sapiens -0.11019994936259536 CMTVVHDK Oxidation (M) 1004.4419 0.44193633 3273 O60271;O60271-4;O60271-2;O60271-9;B4DS36;Q5JB53;Q719J0 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 1 0 5 0 1 32.119 32.199 3 0.022349 6475 20230619_1885_Aki_TMTPro18x_K_F5 63.534 46.208 14804 9197.1 17790 15827 17054 18982 18732 15716 21389 17760 20090 21157 17751 17067 18548 15445 28516 26094 13691 8481.6 17802 15473 17812 18871 18870 16347 21572 17953 20581 21170 18256 17662 19376 16151 27171 24680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8061600 3212 3273 3061 5935 4899 4899 1927 1 9606 Homo sapiens -0.06010695611382744 CNAAFGAHDFHR Unmodified 1401.5997 0.59965104 1116 O75150;O75150-4;A0A0S2Z537;A8K6K1;H3BP71;B4DMM1;Q6ZN99;B4DFU2;B4E313 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 0 0 0 7 0 1 34.125 34.206 3 0.016301 7018 20230619_1887_Aki_TMTPro18x_K_F7 66.708 37.636 17499 14710 27511 27371 26158 24005 24135 30464 27284 20475 37187 41512 29822 37946 42094 19342 40823 41362 16260 13563 27084 26548 27159 24668 24591 30411 27956 21868 37420 41040 31331 38236 42389 21051 39076 39050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5282000 3213 1116 3062 5936 4900;4901 4901 2 9606 Homo sapiens -0.08508480027808218 CNCVCPGTVDTPSLQER Unmodified 1991.8499 0.84993 4445 Q9BUT1;D6R9P2;Q9BUT1-3 BDH2;SLC9B2 3-hydroxybutyrate dehydrogenase type 2 yes no 0 0 0 4 0 1 44.831 44.875 3 0.016889 11699 20230619_1883_Aki_TMTPro18x_K_F4 54.964 52.602 86173 65810 88487 92258 108050 114760 106110 105900 145300 111370 128990 140030 140220 121900 117190 115130 163410 150970 79667 60478 90012 91266 110650 114120 108290 108940 145050 113220 133650 140180 141730 126020 122090 117820 155820 143060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46358000 3214 4445 3063 5937 4902 4902 1 9606 Homo sapiens -0.10632096390145307 CNEEHPAYLASDEITTVR Unmodified 2103.9531 0.95313275 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YFD1;Q6PEK6 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 3 0 1 44.702 44.775 3 0.0022178 11725 20230619_1882_Aki_TMTPro18x_K_F3 66.264 52.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3215 2865 3064 5938 4903 4903 1 9606 Homo sapiens -0.054685694063664414 CNEIINWLDK Unmodified 1303.6231 0.62307182 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96BE0;E9PS65;Q96H53;E9PM13;Q9NZ87;Q9NWW3 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 0 0 6.8 0.748 2 2 1 62.349 62.389 2;3 2.0933E-05 18808 20230619_1888_Aki_TMTPro18x_K_F8 177.57 119.98 1745800 1431200 1585400 1758700 1262900 1726600 1637900 1376900 1627200 1989100 2034500 1462500 2195100 1620800 1623300 2136800 1748100 1747700 1613100 1313000 1620400 1748400 1350100 1739800 1629800 1448200 1676000 1961700 2070800 1516400 2206000 1695100 1670500 2115800 1671400 1664100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 9491100000 3216 3430 3065 5939;5940;5941;5942;5943 4904;4905;4906 4906 3 9606 Homo sapiens -0.016594790338558596 CNELQDIEK Unmodified 1147.5179 0.51793805 2629;940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370;B7ZAX9;B4DZC0;O60264 SMARCA1;SMARCA5 Probable global transcription activator SNF2L1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 no no 0 0 0 3 0 1 47.291 47.371 2 0.00014742 12991 20230619_1882_Aki_TMTPro18x_K_F3 161.17 111.36 35775 33392 30429 36882 33456 39497 33504 38166 50393 44048 50915 47179 51756 39963 39363 54739 50190 45698 33068 30590 31441 36998 34581 39716 34312 39229 50377 44311 52199 47545 52187 42242 40927 54220 47885 43517 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100340000 3217 940;2629 3066 5944 4907 4907 1 9606 Homo sapiens -0.049920202302701 CNEPAVWSQLAK Unmodified 1401.6711 0.67108465 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 7.67 0.471 1 2 55.33 55.391 2;3 1.0902E-06 15886 20230619_1888_Aki_TMTPro18x_K_F8 183.33 126.77 277240 250490 277670 282780 225730 262460 296430 286180 296760 301360 251270 224460 275940 225640 280330 294170 250270 250960 256520 229540 281300 282810 240500 267540 294850 291160 300660 301380 260950 231510 280970 236410 283400 292080 239750 238820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 750910000 3218 826 3067 5945;5946;5947 4908;4909 4909 2 9606 Homo sapiens -0.013684051137943243 CNEQPNRVEIYEK Unmodified 1677.7781 0.77806891 4154 Q7L576;X5D2F4;A0A087WVZ5;B3KWV6;A0A0G2JQT1;A0A0G2JR96;E7EVJ5;Q96F07;Q96F07-2;H7C229;B7Z8N7;A0A8V8TNU3;B7Z3H2;A0A087WU52;A0A087WWL1;A0A0G2JRV9;A0A087WVE1;A0A087WTQ3;A0A087WWZ1;A0A0G2JRX2 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 1 4 0 1 40.814 40.856 3 0.0091443 9949 20230619_1883_Aki_TMTPro18x_K_F4 68.972 56.996 56725 46184 51679 57573 55281 63268 67011 65353 86010 79436 77705 82030 84383 68778 64647 84976 102060 94386 52412 42378 53019 57282 57506 63587 67449 66993 86211 79617 80409 82688 85000 72273 68256 85592 97239 89577 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106840000 3219 4154 3068 5948 4910 4910 1 9606 Homo sapiens -0.03370899690071383 CNFESNFPR Unmodified 1169.4924 0.492392 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 6.5 0.5 1 1 45.508 45.594 2 0.00051347 11918 20230619_1886_Aki_TMTPro18x_K_F6 133.13 111.67 137180 113750 149130 165970 179600 191810 168530 171470 201060 211310 204740 202220 229590 189700 174460 228850 241320 237940 126950 104550 151050 163570 183800 191500 171600 177620 203290 211170 210900 205290 230940 198230 182360 229690 230230 225920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48036000 3220 4372 3069 5949;5950 4911;4912 4911 2 9606 Homo sapiens -0.08557449962040664 CNFYDNK Unmodified 959.38072 0.38071629 1666 A0A7I2V4K5;B4E324;X6R5C5;Q59EV6;X6R8A1;P10619-2;P10619;A0A7I2V4D1;A0A7I2YQT8;A0A7I2V3B2;Q5JZH0;A0A7I2V4R8 CTSA;PPGB Carboxypeptidase;Lysosomal protective protein;Lysosomal protective protein 32 kDa chain;Lysosomal protective protein 20 kDa chain yes no 0 0 0 6 0 1 43.355 43.449 2 0.011144 10993 20230619_1886_Aki_TMTPro18x_K_F6 121.62 95.017 44143 42173 40284 46925 69078 75695 54000 56500 96360 72263 70800 70368 74375 62473 52338 64408 76575 62926 40831 38633 41716 47359 69163 73931 56585 59428 94711 72217 73944 71218 74774 64810 55005 64588 72938 59833 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44610000 3221 1666 3070 5951 4913 4913 1 9606 Homo sapiens -0.10059884319173307 CNIPPAPR Unmodified 923.46472 0.46472069 283 Q53S54;A0A024R475;Q13618-2;Q13618;B7Z600;Q13618-3 CUL3 Cullin-3 yes no 0 0 0 7 0 1 35.242 35.313 2 0.0758 7432 20230619_1887_Aki_TMTPro18x_K_F7 69.176 50.393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3222 283 3071 5952 4914 4914 1 9606 Homo sapiens -7.308431599994947E-05 CNIQYPATEHR Unmodified 1387.6303 0.63028247 3986 Q53EZ4 CEP55 Centrosomal protein of 55 kDa yes yes 0 0 0 5 0 1 34.274 34.362 3 4.9153E-05 7296 20230619_1885_Aki_TMTPro18x_K_F5 119.27 105.02 13067 8046 10701 12691 18166 20319 15123 17750 16004 13048 19329 15390 15073 15385 15621 11344 18153 12689 12046 7411.8 11193 12524 18205 19897 15457 18170 16368 13517 19463 15530 15561 15645 15988 11559 17307 12057 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30271000 3223 3986 3072 5953 4915 4915 1 9606 Homo sapiens -0.0480274643341545 CNIVCTQPR Unmodified 1146.5274 0.5273973 4168 Q7Z478 DHX29 ATP-dependent RNA helicase DHX29 yes yes 0 0 0 8 0 1 36.779 36.765 2 0.0019768 8187 20230619_1888_Aki_TMTPro18x_K_F8 110.76 90.131 25373 19334 23204 24364 23659 28138 25014 26086 35139 25001 23567 24472 29448 20114 19317 36029 32313 31270 23435 17747 23767 24241 24615 28113 25452 26759 34743 25330 24973 24748 29376 21750 20630 35625 30784 29755 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12837000 3224 4168 3073 5954 4916 4916 1 9606 Homo sapiens -0.04000530425719262 CNLACTPPR Unmodified 1087.4903 0.49028351 731 P46379-3;P46379;P46379-2;A0A7I2V508;A0A0G2JK23;A0A024RCR6;A0A1U9X7A6;A0A1U9X7A9;A0A7P0MQS5;P46379-5;A0A0G2JL47;P46379-4;X6REW1;A0A0G2JJM1;F6S6P2 BAG6;BAT3 Large proline-rich protein BAG6 yes no 0 0 0 7 0 2 35.782 35.854 2 0.00072204 7631 20230619_1887_Aki_TMTPro18x_K_F7 107.57 86.068 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3225 731 3074 5955;5956 4917;4918 4917 2 9606 Homo sapiens -0.04996201971493974 CNNVLYIR Unmodified 1050.528 0.52804923 3715 P62306 SNRPF Small nuclear ribonucleoprotein F yes yes 0 0 0 2 0 2 45.043 45.126 2 5.2038E-09 12173 20230619_1881_Aki_TMTPro18x_K_F2 167.82 146.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3226 3715 3075 5957;5958 4919;4920 4919 2 9606 Homo sapiens 0.004806322856211409 CNTCGEPITDR Unmodified 1321.5391 0.5390842 3947 Q15942;Q96AF9;Q28617;B4DY85;H0Y2Y8;Q9BUS0;Q15942-2;B4DQR8;C9JJK5 ZYX Zyxin yes no 0 0 0 2 0 1 33.821 33.878 2 0.0001114 7196 20230619_1881_Aki_TMTPro18x_K_F2 159.09 124.83 19017 12531 14169 20275 23648 26754 29392 24357 45464 26106 24496 17393 34284 18846 22021 21604 22895 22353 17526 11544 14988 19901 24011 26492 29740 25097 44515 26080 26480 18121 34031 19600 22651 21710 21894 21225 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18414000 3227 3947 3076 5959 4921 4921 1 9606 Homo sapiens -0.10882378193059594 CNTDDTIGDLK Unmodified 1250.5449 0.54488108 436 B2R4N3;A0A024R7B0;Q9BZL1 UBL5 Ubiquitin-like protein 5 yes no 0 0 0 2.5 0.5 1 1 47.732 47.807 3 0.028045 13173 20230619_1882_Aki_TMTPro18x_K_F3 55.261 41.452 176380 121380 162380 169570 188610 213010 179070 189900 240340 205400 229030 235670 236900 199070 186260 191200 251400 249550 162830 111590 166550 167800 193770 211500 183030 195970 240840 207760 235820 236520 239160 206230 193900 195540 239890 236410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146530000 3228 436 3077 5960;5961 4922 4922 1 9606 Homo sapiens -0.07036956409751838 CNTDQAGRPK Unmodified 1145.5248 0.52475476 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;B1AHB2 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 1 6 0 1 28.374 28.406 3 0.062816 5218 20230619_1886_Aki_TMTPro18x_K_F6 47.261 20.162 6558.4 2732.4 8883.9 7823.3 16974 13253 7694 15082 7117.8 4663.7 11542 10599 5604.3 7650.8 10214 2939.3 11714 9959.3 6063.6 2549.2 8935.4 7548.4 16692 13030 8305.6 14976 7447.9 5442.9 11375 10396 6146.3 7732.9 10347 3447.1 11181 9391.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7157500 3229 2188 3078 5962 4923 4923 1 9606 Homo sapiens -0.042186625590375115 CNTLITLIER Unmodified 1231.6595 0.65945733 2629 B7ZAX9;B4DZC0;O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 8 0 1 60.059 60.096 2 0.00036608 17818 20230619_1888_Aki_TMTPro18x_K_F8 133.89 102.4 94038 81419 86258 92061 77878 90626 99639 93373 112730 112800 108910 93283 116400 100440 100250 117880 109550 117080 86926 74621 88192 92112 82201 91831 99601 95734 113970 112390 112130 95893 117810 104310 102840 118080 104780 111180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27308000 3230 2629 3079 5963 4924 4924 1 9606 Homo sapiens 0.05289397862884471 CNTPTYCDLGK Acetyl (Protein N-term) 1369.5642 0.56423631 4704 Q9Y277;Q9Y277-2;E5RFP6;E5RJN6;E5RHZ6;E5RHE1;E5RFL1 VDAC3 Voltage-dependent anion-selective channel protein 3 yes no 1 0 0 3.5 0.5 1 1 50.801 50.852 2 0.00012697 14328 20230619_1883_Aki_TMTPro18x_K_F4 113.62 106.6 152150 133780 159810 157810 188040 229410 209300 201640 204020 156220 164780 151370 211960 154020 145970 199770 186700 160380 140810 122660 162180 158350 193730 225830 209580 206650 206490 160290 172840 154190 211570 161270 152120 197660 178050 152840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1289800000 3231 4704 3080 5964;5965 4925;4926 4926 2 9606 Homo sapiens -0.10576323390478137 CNVEPVGR Unmodified 929.4389 0.43889987 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;A0A1U9XBD9;A0A1U9XBC3;Q14676-3;Q14676-4;A1Z5I7;A1Z5I6;A2AB06;B4DQD0;A2AB05;A1Z5I8;A0A087X0R2;A2AB07;A0A291LM07 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 0 3 0 1 32.82 32.891 2 0.039797 6745 20230619_1882_Aki_TMTPro18x_K_F3 72.485 47.562 14009 8701.5 15971 16450 16053 22146 15477 20535 22094 13120 18926 19937 19273 17252 16861 11912 19996 16704 12950 8035.6 16069 16037 16695 21894 15858 20877 21969 13880 19584 19834 19552 17600 17330 12346 19079 15827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27071000 3232 1308 3081 5966 4927 4927 1 9606 Homo sapiens -0.028642026738793902 CNVSFLLSEDGSGK Unmodified 1511.6926 0.69260795 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J428;A0A994J4Q4;A0A994J6R6 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 6 0 1 57.318 57.39 2 1.5672999999999999E-21 17046 20230619_1886_Aki_TMTPro18x_K_F6 221.8 167.38 32869 32942 35334 36863 38416 42775 48951 47764 51364 46009 40405 41932 54721 42245 40670 52582 45137 49761 30455 30174 35757 37002 39926 42924 48800 48392 51765 46475 42603 42777 54703 44136 41916 52481 43175 47276 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13529000 3233 43 3082 5967 4928 4928 1 9606 Homo sapiens -0.042770648757596064 CPCPEPLR Unmodified 1027.4579 0.45792075 2523 B4DL66;Q9H832;D3DTW2;Q9H832-2;I3L286 UBE2Z Ubiquitin-conjugating enzyme E2 Z yes no 0 0 0 4 0 1 37.103 37.147 2 0.036882 8377 20230619_1883_Aki_TMTPro18x_K_F4 73.931 59.936 61894 47373 59228 56898 63207 74926 63142 64768 79778 63581 71958 72280 74406 59502 61368 83023 88984 77010 57188 43463 60436 56924 65412 74151 64193 66825 79970 64622 74288 72596 75254 63043 64271 82648 84790 73252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53812000 3234 2523 3083 5968 4929 4929 1 9606 Homo sapiens -0.05470989374498458 CPDGSTCCELPSGK Unmodified 1566.6113 0.61126286 2502 B4DJI2;P28799;K7EKL3;P28799-2;K7EMR1 GRN Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 yes no 0 0 0 4 0 1 43.136 43.18 3 5.9193E-06 10907 20230619_1883_Aki_TMTPro18x_K_F4 119.25 119.25 34564 28364 32800 37930 50382 43623 48414 46920 58462 43289 57659 57459 51326 44716 58320 51151 63714 56983 31948 26045 33755 37587 50806 43778 49215 47613 58886 44393 58933 57273 52932 46878 59435 51652 60863 54085 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44284000 3235 2502 3084 5969 4930 4930 1 9606 Homo sapiens -0.14937831901670506 CPEDVELCHK Unmodified 1285.5431 0.54310694 1793 Q96I59;A0A8Q3SHT5;B3KPX5;A0A8Q3SHL5;A0A8Q3SIK4;A0A8Q3WKF4;B2RD66;A0A8Q3WKI6;A0A8Q3SHT7;A0A8Q3WLI0;H0YE96;A0A8Q3WKD2;Q96I59-2;Q9H5H1;A0A8Q3SHN6 NARS2 Probable asparagine--tRNA ligase, mitochondrial yes no 0 0 0 2.5 0.5 1 1 41.06 41.128 3 7.8406E-06 10082 20230619_1882_Aki_TMTPro18x_K_F3 129.39 115.96 99384 96573 109480 114060 133280 133770 129230 117190 149720 137510 156240 139480 144690 128970 140080 153970 178360 150670 92082 88513 110750 114010 136330 133450 131150 121440 151590 138000 159380 141240 147900 134670 144700 154110 170090 143240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124400000 3236 1793 3085 5970;5971 4931 4931 1 9606 Homo sapiens -0.0882428869931573 CPEHVLR Unmodified 909.44907 0.44907062 3934 Q15527 SURF2 Surfeit locus protein 2 yes yes 0 0 0 4.5 0.5 1 1 30.79 30.861 3 0.017157 5997 20230619_1885_Aki_TMTPro18x_K_F5 76.035 52.478 35770 24932 36159 34719 36005 34662 36338 36259 45224 37989 43709 35276 43448 34479 34222 37986 49519 43036 33048 22919 36679 34262 37391 35099 36905 36980 45483 38236 44833 35940 43911 35804 35823 38388 47187 40846 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18781000 3237 3934 3086 5972;5973 4932 4932 1 9606 Homo sapiens -0.00927594948643673 CPFIVALNK Unmodified 1060.5739 0.57393679 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 0 4.5 0.5 1 1 59.625 59.652 3 0.00058552 18118 20230619_1883_Aki_TMTPro18x_K_F4 109.86 68.833 55715 49841 60309 53876 48802 55860 55439 51243 68079 64793 52686 53439 68284 56265 53818 73191 60806 69029 51583 45657 60666 54143 51801 56252 55916 53043 68069 64441 55459 54871 68510 58860 55476 72984 58168 65578 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34006000 3238 817 3087 5974;5975 4933 4933 1 9606 Homo sapiens 0.046072774678577844 CPFTGNVSIR Unmodified 1149.5601 0.56007764 3713 P62280;M0QZC5 RPS11 40S ribosomal protein S11 yes no 0 0 0 2.5 0.5 1 1 46.75 46.829 2 0.00062952 12695 20230619_1882_Aki_TMTPro18x_K_F3 119.68 96.94 526350 490530 509980 522310 515780 540580 607260 531860 589850 538000 471660 402430 593870 440410 538720 559690 554660 515860 487000 449220 519600 525390 537340 545370 606260 544310 597380 539460 494520 416370 599220 459770 549730 558020 530270 490570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 561590000 3239 3713 3088 5976;5977 4934;4935 4935 2 9606 Homo sapiens -0.008720000312450793 CPGESLINPGFK Unmodified 1317.6387 0.63872189 4442 Q9BUH6 C9orf142 Protein PAXX yes yes 0 0 0 8 0 1 55.047 55.114 3 0.00044215 15770 20230619_1888_Aki_TMTPro18x_K_F8 94.465 78.926 45742 39968 42543 42469 42094 53918 47741 50021 55980 58140 52908 52485 61857 45131 48353 60418 58791 55438 42290 36610 43486 42855 43986 53559 48074 51563 56480 58147 54804 53291 62164 47639 50047 60155 56127 52720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46488000 3240 4442 3089 5978 4936 4936 1 9606 Homo sapiens -0.007391925168121816 CPGESSHICDFIR Unmodified 1576.6762 0.67624638 1335 A0A2C9F2P4;A0A286YFF7;P50897;B4DWU3;Q5T0S4;A0A286YFE3;A0A286YFL8;P50897-2;A0A286YFL6 PPT1 Palmitoyl-protein thioesterase 1 yes no 0 0 0 5 0 1 45.142 45.219 3 0.0011396 11722 20230619_1885_Aki_TMTPro18x_K_F5 83.541 79.686 38791 30843 32221 38364 41130 48336 41437 40086 47084 39128 42760 37503 44838 36111 37530 38938 51024 44913 35812 28303 33454 38241 42070 47921 41925 41497 47455 39573 44125 38120 45351 37471 39039 39416 48646 42618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64857000 3241 1335 3090 5979 4937 4937 1 9606 Homo sapiens -0.08902469313466099 CPLDDGQAGAAEATAAPTLEDR Unmodified 2228.0015 0.0015395026 933 A0A0A0MRC4;Q86YR5;A0A0A0MSK4;Q86YR5-4;Q86YR5-2 GPSM1 G-protein-signaling modulator 1 yes no 0 0 0 2 0 1 50.151 50.202 3 2.0603E-10 14534 20230619_1881_Aki_TMTPro18x_K_F2 110.38 96.111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3242 933 3091 5980 4938 4938 1 9606 Homo sapiens -0.06334120557085043 CPLDPYFIMPDK Unmodified 1494.6887 0.68870855 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;B1AHB2 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 8 0 1 62.865 62.89 3 0.030773 19003 20230619_1888_Aki_TMTPro18x_K_F8 51.774 28.548 65154 52275 67767 66170 54210 69888 66993 69314 75272 77215 78336 75890 85730 77730 75242 93357 85701 83204 60259 47977 68420 65746 57801 70348 67103 71056 76356 77580 80534 77207 86804 80912 77373 92949 81880 79145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106790000 3243 2188 3092 5981 4939 4939 1 9606 Homo sapiens -0.03884825903173805 CPLSGACYSPEFK Unmodified 1514.6534 0.65338567 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 8 0 1 53.424 53.499 3 4.8842E-06 15050 20230619_1888_Aki_TMTPro18x_K_F8 98.407 92.767 288610 227710 286970 323070 266850 326540 313890 313430 372270 367020 329950 320120 380480 322380 336860 471930 404500 365360 266800 209270 291610 318350 280350 329480 315600 322570 374420 366700 342670 327470 384750 340260 347780 465470 386090 348290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 269540000 3244 3647 3093 5982 4940 4940 1 9606 Homo sapiens -0.08335488430975602 CPNLTHLNLSGNK Unmodified 1466.73 0.72999651 1493 A0A384P5U2;P39687;H0YN26;Q6PKH8;Q08AJ6;Q3KPI8 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes no 0 0 0 2.5 0.5 1 1 46.534 46.613 3 7.3077E-05 12909 20230619_1881_Aki_TMTPro18x_K_F2 107.11 98.8 263210 223160 272950 246340 269290 336110 296360 297000 390160 213630 231560 179670 207890 176350 246430 199960 200880 172900 243510 204500 276300 248180 281160 332090 300070 303800 385210 219750 243740 184090 214770 183270 247130 199240 192450 164610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1530399999.9999998 3245 1493 3094 5983;5984 4941 4941 1 9606 Homo sapiens 0.015300711805366518 CPNLTYLNLSGNK Unmodified 1492.7344 0.73441319 3989 Q53F20;Q9BTT0;E9PPH5;Q5TB19;B4E0D5;E9PLC4;Q9BTT0-3 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes no 0 0 0 3 0 1 56.664 56.701 2 2.2585E-13 17063 20230619_1882_Aki_TMTPro18x_K_F3 206.58 183.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3246 3989 3095 5985 4942 4942 1 9606 Homo sapiens 0.007755356034294891 CPQIVIAFYEER Unmodified 1523.7442 0.74424959 1933;3587 A4D177;Q13185;V9HWG0;P45973;Q6I9T7 CBX3;HEL25;CBX5 Chromobox protein homolog 3;Chromobox protein homolog 5 no no 0 0 0 7 0 1 61.743 61.782 2 0.00019167 18579 20230619_1887_Aki_TMTPro18x_K_F7 120.77 85.326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3247 1933;3587 3096 5986 4943 4943 1 9606 Homo sapiens 0.0033272360883529473 CPQVEEAIVQSGQK Unmodified 1571.7614 0.76135622 219 A0A024R2Z6;Q9BVP2-2;Q9BVP2 GNL3 Guanine nucleotide-binding protein-like 3 yes no 0 0 0 5.5 0.5 1 1 50.707 50.783 3 0.0003917 14063 20230619_1885_Aki_TMTPro18x_K_F5 91.307 74.645 84198 78686 78648 92255 89857 85828 88145 89199 100960 96456 92421 88381 111290 94324 81972 117110 123560 115550 77882 72123 80584 91977 92321 87414 89380 91102 101840 96871 95997 90356 111640 98323 86353 117120 117760 109800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125900000 3248 219 3097 5987;5988 4944 4944 1 9606 Homo sapiens -0.0016540057606562186 CPQVVISFYEER Unmodified 1525.7235 0.72351415 3135 J3KS05;Q6IBN6;P83916;Q9Y654 CBX1 Chromobox protein homolog 1 yes no 0 0 0 5.5 0.5 1 1 58.287 58.356 2;3 1.6259E-05 17397 20230619_1886_Aki_TMTPro18x_K_F6 128.36 109.79 32080 31252 40204 33689 42018 67257 51711 57156 82494 26946 24160 21220 22566 19738 40529 27568 24330 20331 29761 28620 40192 34280 43960 65162 52480 58220 79778 28798 27474 21796 23956 20814 39930 27217 23407 19402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140830000 3249 3135 3098 5989;5990 4945;4946 4946 2 9606 Homo sapiens -0.018318667708172143 CPSIAAAIAAVNALHGR Unmodified 1690.8937 0.8937078 1482 Q14498;Q14498-2;B4E1M7;A0A384NQ03;Q68DD9;B3KWX7;B4DLM0;Q6N037;B4DRA0;E1P5S2;Q6MZY7;B7Z4L7;Q14498-3;Q7Z3L0 RBM39;DKFZp781C0423;DKFZp686A11192;RNPC2;DKFZp686C17209;DKFZp781I1140 RNA-binding protein 39 yes no 0 0 0 7 0 1 61.825 61.864 3 4.2324E-30 18622 20230619_1887_Aki_TMTPro18x_K_F7 228.19 205.54 107580 105060 102440 85425 73755 111520 108320 114430 129880 120000 124690 130480 141590 129120 121560 122960 152870 119510 99556 95997 104000 88392 80083 110870 107920 116790 130850 121320 128950 131900 143100 132860 125680 123510 145740 113670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 846290000 3250 1482 3099 5991 4947 4947 1 9606 Homo sapiens 0.07589668951413842 CPSILGGLAPEK Unmodified 1240.6486 0.64855829 1957 A5YKK6;A5YKK6-2;A5YKK6-3;A5YKK6-4;B3KPW6;H3BMH0 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 8 0 1 56.672 56.729 3 0.041485 16511 20230619_1888_Aki_TMTPro18x_K_F8 47.062 27.275 47263 37194 44381 48430 42776 50807 52142 50197 59060 54708 48979 56971 64625 50468 49407 61450 63156 74126 43670 34148 45332 48012 44848 51169 52237 51454 59394 55125 51458 57490 64725 52900 51335 62241 60370 70230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27344000 3251 1957 3100 5992 4948 4948 1 9606 Homo sapiens 0.03785995488556182 CPTDELSLTNCAVVNEK Unmodified 1948.887 0.88702702 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DGR3;A0A994J5C5;A0A994J855;A0A994J5Y2;A0A994J7T3;I3L0L3;A0A994J5C9;I3L4Q9;A0A0G2JRU0 NSF Vesicle-fusing ATPase yes no 0 0 0 4.5 0.5 1 1 55.025 55.064 3 0.00020955 15892 20230619_1885_Aki_TMTPro18x_K_F5 84.195 69.919 26694 23290 27932 26588 22778 24233 27135 25106 27924 44395 41255 37719 44489 35368 35673 48774 46982 48315 24703 21347 28183 26565 24169 24720 27152 26107 29009 43602 41809 38526 44872 37290 37127 48728 44852 45890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92186000 3252 1435 3101 5993;5994 4949 4949 1 9606 Homo sapiens -0.04946101572727457 CPTLEQYAMR Unmodified 1267.5689 0.56892776 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 7 0.816 1 1 1 48.553 48.631 2 3.4328E-05 12923 20230619_1887_Aki_TMTPro18x_K_F7 153.05 132.17 174070 142740 155240 151710 127720 183020 158280 157220 225300 210680 180630 212870 266580 209640 165740 293450 274120 268840 160820 130780 158870 152960 136170 182060 159890 163810 224060 210240 191290 215920 264590 220840 176990 291750 261200 255620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 343070000 3253 2633 3102 5995;5996;5997 4950;4951 4950 2 9606 Homo sapiens -0.05415394457077127 CPTQFPLILWHPYAR Unmodified 1897.9661 0.96614446 498 A0A024R872;Q96TA1-2;Q96TA1 C9orf88;FAM129B Niban-like protein 1 yes no 0 0 0 7 0 1 61.943 61.982 3 0.048481 18685 20230619_1887_Aki_TMTPro18x_K_F7 44.252 23.589 94070 76811 111280 101860 94026 111670 110280 115710 141820 125080 142880 133890 143780 123620 134730 149790 142110 179960 87115 70526 111310 100970 99528 112230 111280 118160 142650 126210 146520 135260 146290 129290 137670 151730 136160 170470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66487000 3254 498 3103 5998 4952 4952 1 9606 Homo sapiens 0.053080030250157506 CPVAMEEADDTVAPSSTFCK Oxidation (M) 2229.9228 0.92282018 2004 P49407;P49407-2;A8K103;H0YET9 ARRB1 Beta-arrestin-1 yes no 0 1 0 3 0 1 51.5 51.565 3 2.8134E-11 14840 20230619_1882_Aki_TMTPro18x_K_F3 123.14 118.88 16202 14336 17908 14701 13669 14009 16294 14590 18069 20679 22016 18111 21747 17702 19303 23419 20461 19421 15002 13127 17963 14826 14591 14245 16342 15032 18473 20493 22363 18507 22079 18577 19758 23208 19559 18492 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39576000 3255 2004 3104 5999 4953 4953 1257 1 9606 Homo sapiens -0.14294432178076022 CQCDELCSYYQSCCADFMAECK Unmodified 2884.0035 0.0035481664 2802 CON__Q3ZBS7 yes yes 0 0 0 5 0 1 60.681 60.731 3 4.3437E-12 18229 20230619_1885_Aki_TMTPro18x_K_F5 125.09 125.09 + 1650.3 2334.9 1417.5 2713.5 1245.7 3492.4 2916.8 2545.9 4221.1 7345.3 9839.7 24808 7493.6 13812 8907 13663 22762 47942 1531.2 2137.5 1468.7 2716.3 1371.6 3446.3 2884.8 2805.5 4453.7 7683.8 9831.8 23960 7859.2 14613 9831.7 15616 21819 45080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12627000 3256 2802 3105 6000 4954 4954 1 9606 Homo sapiens -0.3630934657562648 CQCDELCSYYQSCCADFMAECKPQVTR Unmodified 3465.3321 0.33209295 2802 CON__Q3ZBS7 yes yes 0 0 1 6 0 1 57.447 57.519 4 1.1945E-28 17061 20230619_1886_Aki_TMTPro18x_K_F6 184.4 179.93 + 13521 12451 16730 23276 19498 30233 17857 16974 33097 57882 81168 121590 45990 71301 95143 57340 80226 116880 12537 11478 16820 22662 20083 29709 18601 19388 34785 58179 79820 118600 50575 74355 94865 61297 77157 110250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90441000 3257 2802 3106 6001 4955 4955 1 9606 Homo sapiens -0.3019598145560849 CQDVSAGSLQELALLTGIISK Unmodified 2202.1566 0.15658358 4301 Q92621;B4DE72;Q6P486;U3KPX2;Q6DKH1 NUP205 Nuclear pore complex protein Nup205 yes no 0 0 0 2 0 1 66.259 66.266 3 1.6812E-11 21331 20230619_1881_Aki_TMTPro18x_K_F2 127.01 116.63 5603.3 5032.6 5566.7 5282.5 4664.3 4979.6 7141.1 5146.6 6038.2 4127.6 5594.5 4873.7 7851.3 5308.8 5257 6589 7437 8139.6 5184.1 4608.8 5644 5314.6 4976.3 5065.2 7017.9 5227.1 6187.5 4253.6 5853.8 4938.5 7810.9 5538.7 5518.7 6682.1 7099.4 7712 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8047800 3258 4301 3107 6002 4956 4956 1 9606 Homo sapiens 0.10359155315245516 CQGGDFTR Unmodified 939.38686 0.3868643 3735 P62937-2;A0A7I2V4V1 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 32.079 32.148 2 0.0011726 6439 20230619_1882_Aki_TMTPro18x_K_F3 147.36 106.51 52607 24680 54877 58150 61818 82016 59753 70859 79364 53224 84836 115260 91332 90922 69705 49895 118980 134830 48532 22914 55697 56212 63744 80750 61012 72679 79831 56665 87243 113210 92114 92452 73861 55617 113470 127110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36304000 3259 3735 3108 6003;6004 4957;4958 4957 2 9606 Homo sapiens -0.0852536608764467 CQGGVNPVR Unmodified 985.47635 0.47634801 2160 A8KAQ3;Q99523-2;Q99523 SORT1 Sortilin yes no 0 0 0 6.5 0.5 1 1 31.36 31.426 2 0.01447 5895 20230619_1887_Aki_TMTPro18x_K_F7 77.058 71.692 12532 7642.1 14744 13137 10961 13044 9584.6 10022 11165 14730 19903 12479 19482 19875 17047 9914.5 20792 16395 11586 7048.1 14722 12808 11652 13120 9816.5 10576 11639 14575 19937 13034 19799 19732 17541 10515 19827 15519 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7832500 3260 2160 3109 6005;6006 4959 4959 1 9606 Homo sapiens -0.016971114082707572 CQHAAEIITDLLR Unmodified 1538.7875 0.78751139 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 8 0 1 59.122 59.164 3 2.6713999999999998E-21 17447 20230619_1888_Aki_TMTPro18x_K_F8 222.74 193.76 94504 38401 80628 91804 78686 78259 82504 93858 92560 88558 91103 78095 99109 83814 78341 113210 87662 93628 87004 35698 83074 88058 81965 80444 83335 94651 93683 89460 93782 80077 99911 87807 80742 112100 83825 89114 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107510000 3261 2644;4322 3110 6007 4960 4960 1 9606 Homo sapiens 0.039669133860797956 CQHLQAEK Unmodified 1012.476 0.47601365 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5 MYH9 Myosin-9 yes no 0 0 0 5 0 1 32.111 32.191 3 0.00065977 6469 20230619_1885_Aki_TMTPro18x_K_F5 128.36 64.737 29492 10840 35871 33498 47744 47629 40010 54244 45944 28638 49371 52618 37195 41240 49368 20757 57446 47597 27225 10141 36066 32123 48392 47191 41017 54223 46514 31046 50005 51916 38998 41810 50264 22792 54818 44959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27644000 3262 148 3111 6008 4961 4961 1 9606 Homo sapiens -0.029725311281254108 CQIPVHSQENR Unmodified 1366.6412 0.6411815 4482 Q9C0D5-2;Q9C0D5 TANC1 Protein TANC1 yes no 0 0 0 4.5 0.5 1 1 30.348 30.419 3 0.0011913 5729 20230619_1883_Aki_TMTPro18x_K_F4 88.987 79.793 7543.9 5346 5238.5 6197.4 10118 11025 8755.3 9362.9 10403 9720.9 12381 10817 11124 8456.8 10584 8819.9 14176 11036 6952.1 4904.7 5593.4 6250.2 10094 10743 8955.4 9681.4 10580 9839.4 12543 10854 11363 8828.4 10959 8987.7 13507 10470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18174000 3263 4482 3112 6009;6010 4962 4962 1 9606 Homo sapiens -0.027473440591165854 CQLEINFNTLQTK Unmodified 1607.7977 0.79774172 387;1069 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;A0A494C1A0;P35609;P35609-2;A0A804HI95;B7Z2N5;Q08043;B2R8Y4;A0A087WSZ2;B4DZQ2;B7Z4K1;Q59FD9;B7Z4P6;Q4VAM3;F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;B4E337;B4DSX0 ACTN1;ACTN2;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 no no 0 0 0 1 0 1 59.66 59.66 3 7.7451E-05 18372 20230619_1880_Aki_TMTPro18x_K_F1 106.17 88.807 58367 46545 40214 50689 40841 58168 47494 59588 62219 72445 57331 66404 85436 70600 55703 111770 107380 116070 53822 42658 42447 50956 42730 58264 47981 61067 62465 72332 60311 67886 84953 74899 60329 111690 102300 110170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111340000 3264 387;1069 3113 6011 4963 4963 1 9606 Homo sapiens 0.018154763206666757 CQLTPNDR Unmodified 1002.4553 0.45527821 4493 Q9H0C8;F8SNU7;H7C2I8 ILKAP;ILKAP3 Integrin-linked kinase-associated serine/threonine phosphatase 2C yes no 0 0 0 4 0 1 32.971 33.028 2 0.0073433 6735 20230619_1883_Aki_TMTPro18x_K_F4 107.9 62.583 17932 9054.8 17451 18734 21199 26038 14671 22655 24376 19246 26165 26895 24708 22917 21207 13482 27224 30242 16538 8383.4 17828 18198 21593 25669 15499 23262 24335 19876 26692 26799 25111 23287 21914 14665 26011 28535 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11741000 3265 4493 3114 6012 4964 4964 1 9606 Homo sapiens -0.04585121507795975 CQNALQQVVAR Unmodified 1285.6561 0.65610329 3806 Q06210-2;Q06210;A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 0 1 0 1 43.545 43.545 2 2.12E-08 11685 20230619_1880_Aki_TMTPro18x_K_F1 171.36 121.32 52607 46274 50309 47702 42992 49767 54997 53328 62172 58917 57135 65037 64810 50640 56007 73596 61858 60918 48650 42374 51177 48128 45583 50268 54984 54389 62735 59422 59246 65257 65461 53918 57528 72828 59122 57998 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42238000 3266 3806 3115 6013 4965;4966 4966 2 9606 Homo sapiens 0.024701478088672957 CQNEQLQTAVTQQVSQIQQHK Unmodified 2495.2187 0.21868334 3285 O60763;O60763-2 USO1 General vesicular transport factor p115 yes no 0 0 0 1 0 1 52.762 52.762 4 2.2855E-16 15475 20230619_1880_Aki_TMTPro18x_K_F1 159.26 149.06 18516 14431 15828 17004 16718 19482 19851 16093 25018 23423 21571 18534 20238 20667 21879 21799 22429 22092 17096 13236 16325 16993 17401 19437 19979 16879 25057 23148 22220 19112 20802 21300 22250 21907 21452 20981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125510000 3267 3285 3116 6014 4967 4967 1 9606 Homo sapiens 0.030882747163104796 CQQALFHGPGEALALTEAAR Unmodified 2139.0531 0.053121563 3496 P23610 F8A1 Factor VIII intron 22 protein yes yes 0 0 0 7 0 1 54.632 54.695 3 0.00227 15629 20230619_1887_Aki_TMTPro18x_K_F7 69.255 51.338 29810 24344 31323 34277 25541 32486 31533 32451 37566 34237 34389 37254 41398 31823 38262 41989 39231 51816 27575 22367 31629 33767 27184 32967 31645 33211 37801 34601 35764 37503 41858 33576 39040 42562 37613 49064 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23481000 3268 3496 3117 6015 4968 4968 1 9606 Homo sapiens 0.029157127181406395 CQQLQQEYSR Unmodified 1338.5986 0.59864799 4369 Q96JB5-2;Q96JB5;Q96JB5-4;J3QL86;J3QQY1;B4DWZ1;J3QS62 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes no 0 0 0 4 0 1 37.022 37.065 2 0.0037873 8366 20230619_1883_Aki_TMTPro18x_K_F4 93.111 82.587 14262 11093 13041 13035 15575 18697 19913 14923 25362 18495 18731 19184 22103 18839 16023 20607 29396 18962 13174 10175 13394 13078 16115 18387 19968 15611 25243 18547 19673 19431 22183 19535 17157 20578 27924 18066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19885000 3269 4369 3118 6016 4969 4969 1 9606 Homo sapiens -0.05710739187361469 CQQVLEPPYDEMFAAHLR Unmodified 2203.019 0.019044243 788 A8K097;A0A024RE04;Q5JVF3-3;Q5JVF3-2;Q5JVF3;Q5JVF3-4 RP11-98F14.6;PCID2 PCI domain-containing protein 2 yes no 0 0 0 6 0 1 58.389 58.458 3 0.008206 17490 20230619_1886_Aki_TMTPro18x_K_F6 62.94 54.948 38253 32183 40738 41504 36533 47485 46773 43703 45234 53909 47543 46675 49205 47267 48204 53807 50081 58349 35397 29537 41132 41225 38588 47456 46524 45182 46313 53708 48750 47727 50155 49078 49173 54204 47956 55342 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51930000 3270 788 3119 6017 4970 4970 1 9606 Homo sapiens -0.03434451765133417 CQSLQEELDFRK Unmodified 1551.7351 0.73514147 1473 Q03252;A0A384NPH0 LMNB2 Lamin-B2 yes no 0 0 1 5.5 0.5 1 1 50.135 50.211 3 3.349E-13 13829 20230619_1885_Aki_TMTPro18x_K_F5 203.93 182.37 265220 240220 240390 237730 182660 206650 261760 277340 257300 305340 282860 253050 317000 261980 281790 324200 295360 266960 245210 219880 245390 240180 196440 213090 259350 279110 263640 305330 290330 259730 320700 273240 288130 321500 282270 254270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 472070000 3271 1473 3120 6018;6019 4971 4971 1 9606 Homo sapiens -0.01865669747553511 CQSLTEDLEFR Unmodified 1396.6293 0.62927941 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98 LMNB1 Lamin-B1 yes no 0 0 0 2.5 0.5 1 1 53.601 53.641 2 1.3612E-08 16042 20230619_1881_Aki_TMTPro18x_K_F2 179.57 138.13 266440 201950 252940 282530 238700 300940 243970 255790 289440 312360 331260 328730 356170 311030 304420 357300 357450 363930 246150 185590 258040 278810 249610 301740 247270 265980 294120 313180 338930 332430 360330 323840 313680 358540 341540 345570 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 898430000 3272 3482 3121 6020;6021 4972 4972 1 9606 Homo sapiens -0.053170055930195304 CQSLTEDLEFRK Unmodified 1524.7242 0.72424243 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98 LMNB1 Lamin-B1 yes no 0 0 1 5.5 0.5 1 1 50.433 50.51 3 3.7449E-07 14113 20230619_1886_Aki_TMTPro18x_K_F6 158.02 130.69 320370 295020 296140 279020 251280 289580 252840 240460 257770 379370 349520 310790 391600 308620 325810 381950 345760 349670 296290 269930 302010 283490 264750 291150 255260 252800 266630 373740 355840 318610 394980 322450 333870 380690 330650 332450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 739800000 3273 3482 3122 6022;6023 4973 4973 1 9606 Homo sapiens -0.01713072121856385 CQTGCWSPDGSR Unmodified 1409.5452 0.54523221 2983 F8VZ44;Q53HS1;Q9NRG9;H3BU82;B4DDU7;Q9NRG9-2;D9DBT0;F8VUB6 AAAS Aladin yes no 0 0 0 5 0 1 38.517 38.61 2 1.0053E-12 8945 20230619_1885_Aki_TMTPro18x_K_F5 204.17 204.17 21821 17132 17488 16370 18230 23663 19046 21851 23507 23019 23801 18682 25313 21225 20402 24885 28286 21725 20139 15685 18133 16706 18946 23332 19305 22458 23711 23076 24431 19275 25559 22006 21289 24761 26943 20692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22032000 3274 2983 3123 6024 4974 4974 1 9606 Homo sapiens -0.1431585996153899 CQVFEETQIGGER Unmodified 1551.6988 0.69875596 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 2.5 0.5 2 2 47.425 47.503 2;3 2.7387E-16 12981 20230619_1882_Aki_TMTPro18x_K_F3 180.48 158.85 204690 158900 195310 198340 200220 222480 200540 208210 254480 240430 221830 224540 265860 229060 229150 255710 262020 240430 189140 145830 199260 197390 207710 222820 203900 214520 255010 240860 231070 228810 268260 237540 235610 255640 250240 228600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1368900000 3275 4005 3124 6025;6026;6027;6028 4975;4976 4976 2 9606 Homo sapiens -0.05502546644265749 CQYVTEK Unmodified 926.41677 0.41676744 3378;26 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;A0A0M4FNU3;A4UCS9;A4UCT0;A0A024QZ64;P09972;B7Z1Y2;B7Z3K9;B7Z1N6;B7Z3K7;B7Z1Z9;B7Z1L5 ALDOA;HEL-S-87p;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C no no 0 0 0 5 0.816 1 1 1 39.928 40.002 2 0.00028744 9526 20230619_1885_Aki_TMTPro18x_K_F5 188.81 124.03 174510 85951 256400 217800 333730 185570 270200 334710 95485 210270 342740 287250 232390 195610 360820 74138 221950 202640 161590 79888 254350 208730 336670 193710 271260 328110 117260 220820 335140 284940 246400 198530 355380 84644 213570 191180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143310000 3276 3378;26 3125 6029;6030;6031 4977;4978 4977 2 9606 Homo sapiens -0.049384271423150494 CRDDSFFGETSHNYHK Unmodified 1998.8279 0.82787265 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991;H0Y8T4 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 1 6.33 1.25 1 1 1 38.96 39.013 5 1.1625E-08 9152 20230619_1885_Aki_TMTPro18x_K_F5 143.28 138.28 61940 60927 85280 79980 76039 84899 65813 66347 92102 81973 92731 95941 105540 84237 74622 93525 103810 95751 57525 55899 84499 79262 79436 85053 67829 69513 92359 82483 95645 96359 105820 87788 78133 93913 98989 90950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 222240000 3277 1059 3126 6032;6033;6034 4979;4980 4979 2 9606 Homo sapiens -0.13158816752093117 CRDELVR Unmodified 946.46545 0.46544897 3607 P49454 CENPF Centromere protein F yes yes 0 0 1 3.5 0.5 1 1 28.753 28.845 3 0.021581 5187 20230619_1882_Aki_TMTPro18x_K_F3 77.046 25.259 28763 16153 23927 24572 26068 27950 24735 24883 37293 29131 35445 30030 30951 26712 22255 28443 31547 20671 26508 14880 24739 24158 26903 27929 25407 25746 37170 29265 36197 30347 31327 27738 23327 28112 30018 19756 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10747000 3278 3607 3127 6035;6036 4981 4981 1 9606 Homo sapiens -0.009925137825462116 CREETFKQESQPPEK Unmodified 1891.8734 0.87342586 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B4DL23 CEP170 Centrosomal protein of 170 kDa yes no 0 0 2 4 0 1 37.945 37.988 4 0.040669 8740 20230619_1883_Aki_TMTPro18x_K_F4 53.169 42.535 25556 23939 27541 25920 24353 25534 29196 32356 28751 29818 31861 23380 24280 19771 31358 21365 22531 13998 23667 21926 27754 26035 25653 26017 29165 32499 29435 30057 32169 23922 25336 20595 31218 21074 21584 13405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27228000 3279 1960 3128 6037 4982 4982 1 9606 Homo sapiens -0.036835912897004164 CREEWAK Unmodified 977.4389 0.43889987 2443 B3KY42;Q96PZ0;Q96PZ0-2;B3KRB2;E7EUH7 PUS7 Pseudouridylate synthase 7 homolog yes no 0 0 1 5 0 1 36.222 36.314 3 0.067043 8040 20230619_1885_Aki_TMTPro18x_K_F5 60.478 27.479 30187 26173 32527 30197 36333 37701 31585 31894 44403 35613 38770 37028 41332 35855 34332 41355 50071 43228 27941 23992 32882 30272 37309 37435 32524 33080 44268 35868 40133 37503 41796 37316 35937 41554 47708 41063 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31653000 3280 2443 3129 6038 4983 4983 1 9606 Homo sapiens -0.0507220267388675 CRELCEK Unmodified 993.43719 0.43718531 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 1 4.5 0.5 1 1 33.46 33.529 3 0.0025623 6986 20230619_1885_Aki_TMTPro18x_K_F5 131.06 79.869 65412 34460 75985 69456 94505 88850 64676 82718 69442 62406 97687 99050 76338 81725 81984 34982 116600 91638 60431 31883 76506 67477 95753 88203 67208 84344 71548 65261 97980 98215 78988 82388 84895 39249 111050 86530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57786000 3281 2088 3130 6039;6040 4984 4984 1 9606 Homo sapiens -0.0597957975414829 CREMDEQIR Oxidation (M) 1251.5336 0.53360489 1095 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;A0A494C0P6;Q6LDX7 TPM3;DKFZp686J1372;TPM3-ROS1 Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor yes no 0 1 1 1 0 1 26.344 26.344 3 0.062987 4576 20230619_1880_Aki_TMTPro18x_K_F1 54.066 36.553 10771 9732 13551 11105 19862 17506 13803 19778 17097 12403 14150 12812 15550 12142 10930 15065 16932 10822 9987.3 8919 13607 11198 19932 17277 14387 19821 17109 12944 14702 12984 15607 12699 11547 14845 16100 10347 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62684000 3282 1095 3131 6041 4985 4985 670 1 9606 Homo sapiens -0.08210056984876246 CREMDEQIR Unmodified 1235.5387 0.53869027 1095 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;A0A494C0P6;Q6LDX7 TPM3;DKFZp686J1372;TPM3-ROS1 Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor yes no 0 0 1 2 0 1 31.685 31.747 2 0.00048747 6394 20230619_1881_Aki_TMTPro18x_K_F2 143.73 107.85 5863.7 6133.2 5703.2 5360 5774 6784.2 5555.9 5931 9372.3 7221.9 9258.3 8931.7 8119.7 5793.7 7917.8 8878.3 10357 8859.7 5430.2 5606 5805.5 5501.5 5997.7 6737 5734.2 6151.3 9316.2 7285.3 9450 8887.1 8309 6246.3 8194.3 8867.7 9875.3 8420.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12179000 3283 1095 3131 6042 4986 4986 1 9606 Homo sapiens -0.06965753122267415 CRPLEENTADNEK Unmodified 1574.6995 0.69948424 3613 P49792;A0A8V8TLN4;A0A8V8TMN6;A0A8V8TLA0;A0A8V8TL79;A0A8V8TMX6 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 1 2 0 1 35.111 35.167 3 2.6644E-06 7747 20230619_1881_Aki_TMTPro18x_K_F2 137.73 105.45 35015 25643 30336 35356 36671 42306 32966 37520 48765 44742 49517 41659 47372 39013 38212 49800 54472 45913 32320 23565 31329 34981 37549 42131 33954 38835 48805 44755 50601 42381 47989 40905 39976 49620 51902 43681 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40589000 3284 3613 3132 6043 4987 4987 1 9606 Homo sapiens -0.06487751995155122 CRTEYEVK Unmodified 1083.5019 0.50189405 2851 D6REB4;Q9H074-2;A0A024R094;Q9H074-3;Q9H074;D6RJF2;D6RJ02 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes no 0 0 1 5 0 1 34.857 34.944 3 0.010691 7548 20230619_1885_Aki_TMTPro18x_K_F5 81.95 21.122 50276 29264 53083 52095 72405 68482 66391 62989 77638 52396 60489 56469 55444 48088 59178 40941 76972 53754 46427 27010 53966 50916 73427 67867 67609 64444 77694 53696 62635 56848 56959 49519 60976 42042 73314 51005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38217000 3285 2851 3133 6044 4988 4988 1 9606 Homo sapiens -0.036516816765242766 CSACNVWR Unmodified 1051.4328 0.43276863 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;E9PLT0;E9PNG3;Q9UG93;Q8WU01;Q9UG12 CSDE1;UNR;DKFZp586J0620;DKFZp566C233 Cold shock domain-containing protein E1 yes no 0 0 0 8 0 1 38.963 38.95 2 0.025055 9056 20230619_1888_Aki_TMTPro18x_K_F8 84.498 59.326 44863 35310 37530 42776 38143 45945 49090 41353 58975 37573 38449 29995 38075 30763 32947 37236 40151 30447 41418 32395 38786 42622 39924 46106 49125 42490 58624 38002 40336 30861 38634 32055 34010 36927 38279 29026 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16311000 3286 88 3134 6045 4989 4989 1 9606 Homo sapiens -0.09089044177062533 CSCSLVVAAR Unmodified 1121.5321 0.53214833 4678 Q9UKN8;Q05CN7 GTF3C4 General transcription factor 3C polypeptide 4 yes no 0 0 0 1 0 1 40.023 40.023 2 0.0076834 10121 20230619_1880_Aki_TMTPro18x_K_F1 84.083 65.104 66192 49623 59024 59380 66259 71928 77341 72584 79358 71403 79187 71794 82722 67047 72548 78706 86870 69859 61119 45530 60675 59349 68541 71800 77384 74072 80697 72252 81359 72753 83820 69936 74767 78404 82861 66509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36172000 3287 4678 3135 6046 4990 4990 1 9606 Homo sapiens -0.02375646282962407 CSDSDGLAPPQHLIR Unmodified 1664.7941 0.79405333 1148 P04637-2;J3KP33;A0A386NC55;A0A386NFX3;A0A386NCX4;B4DNI2;A0A386NC62;H2EHT1;Q1MSW8;A0A386NCB1;A0A386NC25;P04637;A0A386NCW8;P04637-5;P04637-6;P04637-3;A0A0U1RQC9;A0A386NC22;P04637-4;A0A386NDB3;Q2XSC7;K7PPA8;H6U5S3;H6U5S2;E5RMA8;K7PPU4;B6E4X6;A0A386NDA8;A0A386NCU2;A0A386NC20;P04637-8;A0A223PQI5;A0A386NFY2;Q1MSX0;H6U5S4;A0A386NCA6;B4E095;E7EQX7;P04637-7;Q1MSW9;E7ESS1;P04637-9;A0A087X1Q1;A0A087WT22;A0A087WXZ1;E9PFT5;L0ES92;L0ERL2;L0EP82;L0ERI9;Q0ZAK0;Q27HK5;Q0ZAK1;L0EQT1;L0EQ89;L0ERJ3;L0EQJ1;A4GWD0;A4GWB8;A0A0A0U7X4;E2G6R5;A4GWB5;L0EQY4;L0EQS1;S5LMG1;S5LQQ1;S5LJ61;S5LQU8;S5LJ04;S5LQU3;S5LQX7;B2ZAH4;S5LMC6;B2ZAH3;L0EQV3;S5LJ49;S5M207;S5M706;S5M713;S5M224;Q19RW6;A0A1B1PFC7 TP53 Cellular tumor antigen p53 yes no 0 0 0 4 0 1 42.649 42.692 3 0.0030136 10703 20230619_1883_Aki_TMTPro18x_K_F4 57.53 48.098 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3288 1148 3136 6047 4991 4991 1 9606 Homo sapiens -0.011751934531957886 CSDSTLLSNLLEEMK Unmodified 1738.8117 0.81173681 1855 A0A8V8TQW4;O14617-4;O14617;O14617-5;O14617-2;O14617-3;B3KSV6;B0AZV8;Q9UEA9 AP3D1 AP-3 complex subunit delta-1 yes no 0 0 0 6.5 0.5 1 1 65.246 65.282 3 0.011858 20480 20230619_1886_Aki_TMTPro18x_K_F6 63.128 52.023 12606 10663 11151 11121 12419 11463 12898 15224 16143 13877 13828 12364 12095 11261 12774 13294 13580 18273 11648 9766.4 11465 11210 12802 11662 13081 15245 16164 14050 14212 12589 12440 11767 13027 13601 13018 17286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41398000 3289 1855 3137 6048;6049 4992 4992 1 9606 Homo sapiens -0.02811659033181968 CSEGSFLLTTFPR Unmodified 1513.7235 0.72351415 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V464;A0A7I2V4N2;H7C367 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 1 0 1 60.729 60.729 3 2.4052E-21 18791 20230619_1880_Aki_TMTPro18x_K_F1 179.59 148.72 34017 27995 29079 33095 30429 37083 43154 41624 44185 39657 44172 38217 44932 32862 33442 46384 39077 43767 31418 25674 30010 33064 31870 37291 42790 42152 44926 40138 45301 38726 45252 34814 34594 46206 37366 41581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91637000 3290 1112 3138 6050 4993 4993 1 9606 Homo sapiens -0.012798667708693756 CSEGVFLLTTTPR Unmodified 1479.7392 0.73916421 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 4.5 3.5 1 1 56.512 56.541 2 2.9112E-10 17074 20230619_1880_Aki_TMTPro18x_K_F1 204.17 159.31 230560 167180 195380 242500 170400 235760 243180 224840 261940 270840 237710 224270 294380 257920 212830 289010 274400 286490 212770 153730 201400 238480 181370 238470 241490 231760 264970 269910 247360 231000 294880 266620 221670 289570 262030 272090 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 565280000 3291 1450 3139 6051;6052 4994;4995;4996 4994 3 9606 Homo sapiens 0.018484197461702934 CSENKLPAELQELPGLSHQYWSAPSDK Unmodified 3083.4658 0.46584948 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1;G3V3C7;A0A0C4DGK8;H7C4A8;G3V5M0;G3V359 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 1 8 0 1 60.436 60.473 4 7.724E-09 17997 20230619_1888_Aki_TMTPro18x_K_F8 113.64 91.078 113570 126400 140070 124920 119830 111940 132610 125970 80897 132950 139900 75861 83017 55629 157770 46812 49323 30524 105460 115620 139650 126260 126020 114650 131520 127910 87844 132070 138000 78971 89797 57684 152520 46666 48110 29233 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68036000 3292 3515 3140 6053 4997;4998 4997 2 9606 Homo sapiens 0.007455193536770821 CSESIPK Unmodified 819.37965 0.37965365 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9;Q05D33;Q6PJL0;A0A7I2V384 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 4.5 0.5 1 1 38.89 38.957 2 0.0070992 9110 20230619_1883_Aki_TMTPro18x_K_F4 127.84 68.863 107970 54553 128400 133930 189980 221700 139300 165070 175600 119070 194650 231890 175490 182140 180790 85439 240440 243500 99754 50665 129690 129660 191210 216000 144610 171250 177340 126360 198240 228320 180230 184420 186490 96587 229500 229590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108940000 3293 261 3141 6054;6055 4999;5000 4999 2 9606 Homo sapiens -0.037260986880710334 CSGDGVGAPR Unmodified 974.42398 0.42397808 2230 Q6IAU5;B2R665;O15355 PPM1G Protein phosphatase 1G yes no 0 0 0 2.5 0.5 1 1 30.098 30.18 2 2.8319E-05 5665 20230619_1882_Aki_TMTPro18x_K_F3 159.28 113.94 37331 23263 48482 42820 59215 71459 50317 58925 56323 41608 59165 66682 53680 55083 54658 28590 75932 58250 34553 21473 48455 41981 60443 69735 51475 60563 57090 43766 60388 66095 55090 55785 56577 30917 72323 55077 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41061000 3294 2230 3142 6056;6057 5001;5002 5002 2 9606 Homo sapiens -0.06425694541883331 CSGPGLER Unmodified 874.3967 0.3967007 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9 FLNA Filamin-A yes no 0 0 0 3.5 0.5 1 1 31.867 31.936 2 0.027581 6296 20230619_1883_Aki_TMTPro18x_K_F4 82.241 51.737 40875 25089 43392 44453 71544 77796 59049 56472 77423 49366 68703 67387 60395 56616 66994 33547 73000 67507 37756 23148 44304 43685 71764 75608 60796 58964 77376 50899 70538 67182 62257 57556 68145 36102 69750 63779 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35079000 3295 3484 3143 6058;6059 5003 5003 1 9606 Homo sapiens -0.0455217808226962 CSGPGLSPGMVR Unmodified 1216.5693 0.56926211 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 0 0 1 0 1 42.17 42.17 2 0.021341 11038 20230619_1880_Aki_TMTPro18x_K_F1 66.19 43.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3296 3484 3144 6060 5004 5004 1 9606 Homo sapiens -0.030359747372131096 CSGPGLSPGMVR Oxidation (M) 1232.5642 0.56417674 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 1 0 8 0 1 37.749 37.735 2 0.038118 8554 20230619_1888_Aki_TMTPro18x_K_F8 64.064 41.978 25623 21405 22049 22293 33379 32687 30692 28951 35726 27448 29932 24909 26927 20583 31682 23286 29311 27464 23669 19606 22865 22587 33683 32197 31239 29785 35857 27761 30829 25268 27786 21540 31954 23618 28054 26048 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25188000 3297 3484 3144 6061 5005 5005 2139 1 9606 Homo sapiens -0.042802785998219406 CSGQHWER Unmodified 1058.4352 0.43521147 4185 Q86U75;Q9HCN8 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes no 0 0 0 8 0 1 27.507 27.537 3 0.010344 4802 20230619_1888_Aki_TMTPro18x_K_F8 74.173 50.404 6152.3 3885 4046.4 4921.8 5812.7 7973.6 6107.8 5971.6 9963.9 6037.4 9327.1 7287.3 7809.6 5340.3 5632.8 6767.8 7622.8 5768.9 5664.6 3569.3 4320.1 4921.8 5931.6 7779.9 6255.4 6239.1 9885.4 6146.2 9512.7 7284.9 7907.4 5651.3 5881.6 6719.9 7261.4 5496.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1410800 3298 4185 3145 6062 5006 5006 1 9606 Homo sapiens -0.09166872447758578 CSHLLVK Unmodified 855.46366 0.46365805 3855 Q13526;K7EMU7;B3KUM4 PIN1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 yes no 0 0 0 2 0 1 39.151 39.218 3 0.0020058 9437 20230619_1881_Aki_TMTPro18x_K_F2 127.84 93.766 372930 197780 319810 339320 330820 283450 363870 371550 436700 403390 477870 391860 428500 390350 342560 460970 489640 407130 343680 182540 329470 330240 343210 292920 367300 374350 442160 405650 485440 398750 435110 406260 358600 458770 466490 387560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313590000 3299 3855 3146 6063 5007 5007 1 9606 Homo sapiens 0.030144771994969233 CSILAAANPAYGR Unmodified 1362.6714 0.671419 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 3 0 1 49.989 50.064 2 2.3544E-10 14119 20230619_1882_Aki_TMTPro18x_K_F3 210.27 173.08 85878 69447 76902 80762 74545 81076 77211 81627 90092 95463 89590 75481 86213 73920 82301 95086 90185 78564 79334 63682 78842 80660 77719 81997 78136 83705 91086 95122 91701 77532 87921 77415 84261 94259 86131 74838 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136170000 3300 1091 3147 6064 5008 5008 1 9606 Homo sapiens 0.004590146060309053 CSNLCTEIVEYTSK Unmodified 1702.7542 0.75422193 2555 B4DNN4;Q53GZ5;P23921;B4E0I8;E9PL69;B4DXB0;B4DS95;B4DXD1 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 0 0 0 6 0 1 59.205 59.271 3 0.01925 17808 20230619_1886_Aki_TMTPro18x_K_F6 58.139 49.318 50217 44659 46463 50066 45667 49360 45262 43562 48924 61051 55694 49698 70203 54234 57063 75472 68513 66763 46431 40923 47512 50117 47490 49860 45798 45381 49994 60415 57414 51173 70536 56945 58989 74954 65430 63510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83423000 3301 2555 3149 6065 5009 5009 1 9606 Homo sapiens -0.06904501238773264 CSNPLDTSVK Unmodified 1119.523 0.52302343 3468 P17812;A0A3B3IRI2;B4E1E0;A0A8Q3WKZ7;B4DMB5;A0A8Q3WL40;A0A3B3IRQ8;A0A3B3ITF6;A0A3B3ITB8;B7Z9C4 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 6 0 2 45.389 45.475 2;3 5.722E-07 11851 20230619_1886_Aki_TMTPro18x_K_F6 185.96 141.51 216610 152270 180800 183050 203720 192220 202530 187740 252560 222300 272000 260960 259170 220740 218100 278670 278670 257590 199850 139760 186950 182500 209670 193700 205820 193100 255090 224060 277450 261950 263010 232020 226170 277770 265900 244960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 183880000 3302 3468 3150 6066;6067 5010;5011 5010 2 9606 Homo sapiens -0.031957163676679556 CSPIGVYTSGK Unmodified 1167.5594 0.55940893 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 1.67 0.471 1 2 48.131 48.178 2;3 3.5858E-06 13587 20230619_1881_Aki_TMTPro18x_K_F2 191.4 180.49 120610 97281 104090 121330 102600 122850 124310 108190 137260 151160 156060 144960 164270 143400 131480 156530 166620 154850 111390 89268 107210 120550 107390 123770 124460 112760 139920 150300 159480 147410 165880 148660 136340 156940 159000 147130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 263850000 3303 2188 3151 6068;6069;6070 5012;5013 5013 2 9606 Homo sapiens -0.017668394709517088 CSPNMCEHDGR Unmodified 1361.4911 0.49108815 176 K7EMM9;A0A024R1Y9;P78357 CNTNAP1 Contactin-associated protein 1 yes no 0 0 0 2 0 1 27.425 27.501 3 0.0010242 4818 20230619_1881_Aki_TMTPro18x_K_F2 90.614 74.476 3689.4 4371.3 4908.5 5108.5 5268.2 5740.8 6201.5 5470.1 5018.4 6423 6473.3 4798.3 4153.6 5141.1 6089.8 5321.9 7940.2 6321.3 3430.3 4003.8 4892.7 5107.6 5459.9 5752.2 6162.2 5633.1 5241.2 6388.7 6464.5 4960.1 4418.1 5298 6255.7 5403.7 7568.1 5999.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2414100 3304 176 3152 6071 5014 5014 1 9606 Homo sapiens -0.17519775384766945 CSTPEEIK Unmodified 962.4379 0.43789681 3684 V9HWA6;P60981;P60981-2;F6RFD5 HEL32;DSTN Destrin yes no 0 0 0 3 0 1 39.856 39.913 2 0.0023502 9566 20230619_1882_Aki_TMTPro18x_K_F3 141.52 87.964 77352 42972 93244 91054 110060 151000 93113 112030 126640 97084 133810 144820 127800 137820 122480 70293 158480 157150 71503 39780 93666 88670 112790 147050 95980 116670 127270 100480 136750 144470 130590 138800 126320 76780 151280 148340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86503000 3305 3684 3153 6072 5015 5015 1 9606 Homo sapiens -0.0448246183344736 CSTPEEIKK Unmodified 1090.5329 0.53285983 3684 V9HWA6;P60981;P60981-2;F6RFD5 HEL32;DSTN Destrin yes no 0 0 1 6 0 1 39.036 39.119 3 0.010128 9166 20230619_1886_Aki_TMTPro18x_K_F6 70.389 33.198 108170 60149 131680 131790 166630 199580 135930 184370 176330 135330 199240 214360 183950 164480 179690 106440 216070 188500 100000 55713 132350 127950 169620 196100 140250 187920 178060 141820 202760 212190 188080 168260 184360 112760 206200 178270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105410000 3306 3684 3154 6073 5016 5016 1 9606 Homo sapiens -0.008785283622728457 CSVASIK Unmodified 763.38982 0.38982441 2657 Q6IBR8;B5BU01;P20042;Q96I16 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 8 0 1 41.595 41.593 2 0.013493 10127 20230619_1888_Aki_TMTPro18x_K_F8 113.89 61.206 58049 30758 65756 71712 82042 100610 64612 81557 83383 63818 86999 96104 76808 75396 83131 42318 143810 95627 53617 28529 66438 69330 83557 98987 66805 84117 83949 66462 88717 95293 79158 76724 87508 46184 136670 90438 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33455000 3307 2657 3155 6074 5017 5017 1 9606 Homo sapiens -0.0013349096282126993 CSVDFTR Unmodified 883.3858 0.38580166 1222 A0A140VK27;P09960;P09960-2;Q59ES1;B4DEH5 LTA4H Leukotriene A-4 hydrolase yes no 0 0 0 5 0 1 39.154 39.245 2 0.0074614 9201 20230619_1885_Aki_TMTPro18x_K_F5 125.01 76.247 72710 60540 70322 73772 93239 100940 80155 77212 112960 75143 93802 89516 92469 74988 78969 101250 99813 89418 67222 55534 71992 73752 94736 99469 82565 80472 112330 76596 97027 89811 93781 79202 81809 100600 95227 85093 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74544000 3308 1222 3156 6075 5018 5018 1 9606 Homo sapiens -0.06055580456552434 CSVLAAANPVYGR Unmodified 1376.6871 0.68706906 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 3 0 1 49.512 49.59 2 7.0044E-11 13922 20230619_1882_Aki_TMTPro18x_K_F3 188.87 149.02 180320 148630 148700 166250 124930 158740 166950 152750 177310 213010 195980 158490 221940 180180 176990 206140 199310 177820 166510 136230 153460 166380 133010 160970 166230 158110 180980 210390 201050 164200 223480 186580 182150 205090 190340 169280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180810000 3309 1104 3157 6076 5019 5019 1 9606 Homo sapiens 0.013793011230973207 CSVLAAANSVFGR Unmodified 1350.6714 0.671419 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 5 0 1 59.389 59.443 2 1.0146999999999999E-28 17650 20230619_1885_Aki_TMTPro18x_K_F5 266.26 237.31 153610 128050 122490 127920 107300 139680 131110 134830 152930 165490 135250 117500 156620 128410 122890 164360 141580 129390 141820 117250 126840 129440 113570 140270 131520 138840 154000 164160 140380 121890 157550 134020 126820 162530 135200 123310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74765000 3310 2188 3158 6077 5020 5020 1 9606 Homo sapiens 0.010110146060242187 CSVLPLSQNQEFMPFVK Oxidation (M) 2038.9856 0.98561885 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4 GARS Glycine--tRNA ligase yes no 0 1 0 2 0 1 62.22 62.23 3 0.00028665 19621 20230619_1881_Aki_TMTPro18x_K_F2 73.983 61.818 44394 38205 51444 44205 43628 45407 51721 48753 52393 57318 55893 59900 58936 48865 55017 63866 64462 68619 41117 35023 51509 44201 46099 45921 51722 49811 53510 57526 57349 60308 59868 51578 56585 64174 61615 65109 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66078000 3311 3576 3159 6078 5021 5021 2244 1 9606 Homo sapiens 0.007685464628821137 CSVNLANK Unmodified 904.44365 0.44365089 3865 Q13642-4;Q13642-5;Q13642-1;Q53FI7;B7Z4B7;B7Z5V0;B7Z9A1;B7Z5T3;B7Z6U8;B3KRI9 FHL1 Four and a half LIM domains protein 1 yes no 0 0 0 8 0 1 41.848 41.845 2 0.00094009 10234 20230619_1888_Aki_TMTPro18x_K_F8 152.63 83.715 33668 18916 35292 32771 35336 58344 40365 43823 61602 20500 31978 40835 28831 32757 32235 21799 50388 39531 31084 17456 35729 32263 37025 56633 41046 45133 60203 22678 34128 40233 29783 33449 33654 23114 47960 37399 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11921000 3312 3865 3160 6079 5022 5022 1 9606 Homo sapiens -0.012393185311225352 CSVNLANKR Unmodified 1060.5448 0.54476192 3865 Q13642-4;Q13642-5;Q13642-1;Q53FI7;B7Z4B7;B7Z5V0;B7Z9A1;B7Z5T3;B7Z6U8;B3KRI9 FHL1 Four and a half LIM domains protein 1 yes no 0 0 1 3 0 1 36.229 36.284 3 0.087352 8079 20230619_1882_Aki_TMTPro18x_K_F3 41.164 14.049 49441 39015 53906 43303 74103 57174 66974 57904 67804 28504 38501 30445 28547 26084 51721 17644 30881 26256 45741 35764 54602 43605 74957 56849 67924 58333 67724 30509 40446 30699 30554 26610 50843 18465 29716 24864 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12288000 3313 3865 3161 6080 5023 5023 1 9606 Homo sapiens 0.016911331715846245 CSWLVVQCLQR Unmodified 1447.7064 0.7064243 3449 P14324-2;P14324;A0A087X090 FDPS Farnesyl pyrophosphate synthase yes no 0 0 0 4.5 0.5 2 2 58.368 58.397 2;3 4.5819E-13 17232 20230619_1885_Aki_TMTPro18x_K_F5 175.93 142.71 42133 37597 37654 33037 39549 50670 44416 46525 65560 21729 22091 25157 23118 19917 26549 25491 26621 24219 38947 34384 38635 34014 41167 49804 45122 47132 63709 23480 24783 25224 23752 21006 26933 25461 25454 23026 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109540000 3314 3449 3162 6081;6082;6083;6084 5024;5025 5025 2 9606 Homo sapiens 0.000479341423670121 CSWQDLK Unmodified 935.4171 0.41710179 1567;2085 A0A590UJK4;A0A590UK01;A0A590UJP7;Q59GY3;A8K588;A0A590UK80;Q13247-3;Q13247;V9HVZ0;B4DEM8;A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5 SRSF6;HEL-S-91;SFRS4;SRSF4 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 4 no no 0 0 0 6.5 0.5 1 1 49.616 49.697 2 0.007829 13431 20230619_1887_Aki_TMTPro18x_K_F7 122.13 48.197 613540 531590 595230 550600 614310 700070 679000 681260 764250 706850 739980 692200 810470 655070 592200 765000 809390 716770 567390 486840 606250 556890 638570 696300 683590 697730 772750 712700 762860 702420 814510 682880 618910 763840 771680 681640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 344920000 3315 1567;2085 3163 6085;6086 5026 5026 1 9606 Homo sapiens -0.05319007422451705 CTALTFIASEEK Unmodified 1368.6595 0.65951691 3670 P57081;P57081-2 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes no 0 0 0 6 0 1 58.348 58.417 3 0.00033388 17452 20230619_1886_Aki_TMTPro18x_K_F6 72.62 60.643 59988 55680 64419 57561 50803 55556 63095 61341 66917 63015 54002 48176 61184 44758 64983 66188 57750 50551 55550 50979 64822 58012 54153 56497 63043 62313 67460 63143 56317 49503 62346 47440 65618 65294 55275 48206 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21717000 3316 3670 3164 6087 5027 5027 1 9606 Homo sapiens -0.010066469278172008 CTCPALK Unmodified 848.38844 0.3884442 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 0 8 0 1 40.117 40.107 2 0.018314 9546 20230619_1888_Aki_TMTPro18x_K_F8 107.43 66.509 59054 33238 76926 74935 82565 96001 80324 90163 85185 63037 91868 97986 100860 81505 74993 51185 118800 100840 54636 30801 76737 72454 85238 95236 81328 91769 86676 66246 94350 97271 101430 83091 78976 54792 113120 95320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35728000 3317 1005 3165 6088 5028 5028 1 9606 Homo sapiens -0.04181448323254244 CTELNQAWSSLGK Unmodified 1492.698 0.69802768 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4.5 3.5 1 1 57.971 58.018 2;3 0.012097 16999 20230619_1888_Aki_TMTPro18x_K_F8 64.798 53.006 38225 31851 39473 42047 41718 45953 45698 46106 55614 40584 44800 40701 43462 39020 40157 46891 43108 48157 35360 29241 40046 41673 43269 46167 46147 46944 55610 41347 46386 41294 44264 40717 41096 47046 41252 45707 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20250000 3318 1022;3868 3166 6089;6090 5029;5030 5030 2 9606 Homo sapiens -0.028613412932827487 CTESEEEEVTK Unmodified 1339.5449 0.54494066 1976 A6NJA2;B2RD79;P54578-2;P54578-3;P54578;D3DUG9;B3KTG4 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 1 0 1 39.273 39.273 3 6.0514E-05 9769 20230619_1880_Aki_TMTPro18x_K_F1 128.01 112.81 26053 19076 37727 37353 45273 39825 39369 42997 48839 38535 39469 60278 44328 42305 50866 29523 61431 50714 24164 17613 37451 36231 46170 40151 40341 43589 48838 39844 41313 59476 45448 43548 52062 31138 58600 47983 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136930000 3319 1976 3167 6091 5031 5031 1 9606 Homo sapiens -0.11125001200412044 CTGGEVGATSALAPK Unmodified 1417.6871 0.68712864 3530 P30050;Q59FI9;P30050-2;D3DS95 RPL12;hCG_21173 60S ribosomal protein L12 yes no 0 0 0 6 0 1 45.252 45.341 2 5.6493E-14 11815 20230619_1886_Aki_TMTPro18x_K_F6 199.7 180.92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3320 3530 3168 6092 5032 5032 1 9606 Homo sapiens -0.0050074366756689415 CTGNELSIEQCPK Unmodified 1534.6756 0.67557768 3669 P56730;Q96I80 PRSS12 Neurotrypsin yes no 0 0 0 4 0 1 45.911 45.954 3 0.0852 12136 20230619_1883_Aki_TMTPro18x_K_F4 47.532 36.427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3321 3669 3169 6093 5033 5033 1 9606 Homo sapiens -0.07037308753183424 CTHWAEGGK Unmodified 1044.4447 0.44471353 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 6 0.816 1 1 1 36.155 36.219 3 5.5481E-06 7967 20230619_1885_Aki_TMTPro18x_K_F5 132.88 115.64 247610 124930 223860 206150 235620 233760 231900 242790 312920 282420 325180 313030 316880 261170 279830 261130 402840 336880 228230 115280 229390 201850 243710 234450 236630 248410 314560 284270 332540 314560 321980 271270 291830 266730 383790 319410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 399130000 3322 2973 3170 6094;6095;6096 5034;5035 5034 2 9606 Homo sapiens -0.07573104162224809 CTITGLTFWDPSCEAEDRGDK Unmodified 2457.0577 0.057674173 499 Q5T9B9;A8K2X4;A0A024R878;P17813-2;P17813;Q96CG0;F5GX88;B7Z6Y5;B4DTC8;Q53G87 ENG Endoglin yes no 0 0 1 5 0.816 1 1 1 60.402 60.44 3 7.481E-08 18292 20230619_1886_Aki_TMTPro18x_K_F6 104.84 97.561 25942 23093 23201 27279 41013 61381 78206 77278 118590 42635 62226 79055 49113 63347 78700 57993 73477 109500 23980 21171 24166 27669 42377 59765 77786 76870 115920 46184 66084 78050 52128 65538 79116 61297 70602 103330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 123140000 3323 499 3171 6097;6098;6099 5036;5037;5038 5037 3 9606 Homo sapiens -0.11257235711946123 CTLCSQPGATIGCEIK Unmodified 1793.811 0.8110253 1028 A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0;Q5JRC6;B4E138;A0A7D4XHZ3 PHF6 PHD finger protein 6 yes no 0 0 0 7.5 0.5 1 1 50.952 51.03 3 0.014307 14129 20230619_1887_Aki_TMTPro18x_K_F7 59.513 51.292 33863 28460 40034 40786 41741 39840 43304 41116 50821 45007 51889 51498 44999 37250 48502 52978 57684 43826 31365 26151 40178 40159 43202 40396 43809 42037 51363 45474 52891 51518 46317 39706 49785 52464 55007 41774 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125690000 3324 1028 3172 6100;6101 5039 5039 1 9606 Homo sapiens -0.05412776953903631 CTLSDDCIPLTWR Unmodified 1635.7385 0.73851229 4561 Q9NPF0;Q9NPF0-2 CD320 CD320 antigen yes no 0 0 0 6 0 1 59.509 59.571 2 4.5383E-12 17939 20230619_1886_Aki_TMTPro18x_K_F6 158.05 137.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3325 4561 3173 6102 5040 5040 1 9606 Homo sapiens -0.05392742965182151 CTLTNIPQTQALLNK Unmodified 1713.9084 0.90835481 2588 B4E2E1;B4DTM6;O95487-2;O95487;O95487-3 SEC24B Protein transport protein Sec24B yes no 0 0 0 3 0 1 57.736 57.769 3 1.3293E-07 17525 20230619_1882_Aki_TMTPro18x_K_F3 125.29 105.97 44452 39241 42753 45835 34091 37771 43749 41862 51277 53350 49938 49075 52293 51415 49378 63781 57423 55226 41110 35974 43458 45657 36367 38915 43795 42810 51779 53177 51401 50114 53216 53573 50787 63378 54849 52553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7263200 3326 2588 3174 6103 5041 5041 1 9606 Homo sapiens 0.07995696308921652 CTPACISFGPK Unmodified 1236.5631 0.5631141 3544 P34932;B4DH02;V9HW33;Q59GF8;O14992;P34932-2 HSPA4;HEL-S-5a;HS24/p52 Heat shock 70 kDa protein 4 yes no 0 0 0 2.5 0.5 1 1 51.384 51.442 2 0.00037179 15078 20230619_1881_Aki_TMTPro18x_K_F2 137.98 94.73 60381 55831 51868 62753 57537 64421 70244 70260 71832 75004 69942 64225 78958 60598 67380 84320 71834 68937 55813 51155 53560 62840 59669 65163 70127 71491 73054 75203 72207 65614 79706 63900 69060 83443 68667 65650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67600000 3327 3544 3175 6104;6105 5042 5042 1 9606 Homo sapiens -0.04570492968719009 CTPDQLYR Unmodified 1051.4757 0.4756793 618 A0A024RAC6;Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes no 0 0 0 5 0 1 40.005 40.095 2 0.0095739 9581 20230619_1885_Aki_TMTPro18x_K_F5 101.33 87.819 46000 42337 42898 49490 51420 55413 57747 55347 63738 58441 63976 61313 63180 56534 56125 64189 70900 69648 42544 38807 44010 49473 52900 55593 58028 56634 64584 58996 65572 61970 64205 58876 58054 64665 67685 66099 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22354000 3328 618 3176 6106 5043 5043 1 9606 Homo sapiens -0.04799950847996115 CTPSVISFGSK Unmodified 1181.5751 0.575059 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;B4DZB4;R4GN69 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 2.5 0.5 1 1 52.847 52.893 3 3.5179E-05 15433 20230619_1882_Aki_TMTPro18x_K_F3 135.8 113.75 243310 208310 231680 239440 220330 236560 256500 248800 267050 256580 246570 201640 247760 178680 246570 262580 217250 207900 224960 190960 236190 239310 230670 239790 256890 253550 270680 257200 253750 206640 252510 189630 249220 259430 208080 198080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118580000 3329 769 3177 6107;6108 5044;5045 5045 2 9606 Homo sapiens -0.008465529538852934 CTVDVPEDLR Unmodified 1202.5601 0.56013721 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;P51114-3;B4DM21;B4DGH9;E7EU85;C9JAJ4;C9JY20;C9JZE0;C9J5B4;C9IZ22 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 0 1.5 0.5 1 1 46.276 46.316 2 0.00029251 12725 20230619_1881_Aki_TMTPro18x_K_F2 162.31 120.21 109660 77307 90166 108410 88043 121750 109250 104750 129570 135620 125040 127930 154680 122490 106210 154290 139260 146320 101160 71067 93330 107040 92457 121630 109540 109020 130760 135200 129760 130040 154590 128260 110940 153950 132970 139030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120550000 3330 1029 3178 6109;6110 5046 5046 1 9606 Homo sapiens -0.033040448219026075 CTVFHGAQVEDAFR Unmodified 1635.7464 0.74637486 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 6 0.816 1 1 1 46.964 47.046 3 1.2404999999999998E-46 12580 20230619_1886_Aki_TMTPro18x_K_F6 298.3 273.56 348590 288080 338040 330370 234040 292820 303870 319760 328520 428520 417070 376950 436210 347350 356190 477600 439840 413270 322270 264110 342650 329870 253500 299600 303440 327690 337230 425450 424230 384220 440650 366240 368890 473890 419850 393300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1417300000 3331 3606 3179 6111;6112;6113 5047;5048 5048 2 9606 Homo sapiens -0.04606847653371915 CTVIAAANPIGGR Unmodified 1298.6765 0.67650438 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;Q9BWF4 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 2.5 0.5 2 2 46.965 47.043 2;3 4.5611E-06 12804 20230619_1882_Aki_TMTPro18x_K_F3 167.67 144.93 157080 134890 135400 143460 163610 178730 164660 143400 205760 147120 153210 140150 170980 121360 130840 161470 148950 155190 145130 123570 139820 144670 167840 177310 167130 149090 205050 148440 160310 142050 171900 128050 134930 161170 142380 147440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 424630000 3332 2702 3180 6114;6115;6116;6117 5049;5050 5050 2 9606 Homo sapiens 0.039113184686584646 CTYLVLDEADR Unmodified 1353.6235 0.62346575 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 2.5 0.5 1 1 52.31 52.362 2 5.8197E-12 15488 20230619_1881_Aki_TMTPro18x_K_F2 204.34 184.55 249620 223390 229190 249930 200990 248590 261800 252900 273230 305600 294690 294430 328010 275070 284240 350440 328450 347970 230790 204700 234270 250290 212860 251590 260850 259520 278750 305620 302800 298820 331640 288420 292620 350610 313970 330450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 285150000 3333 1328 3181 6118;6119 5051;5052 5051 2 9606 Homo sapiens -0.039201041046680984 CTYVVLDEADR Unmodified 1339.6078 0.60781569 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8;A0A8V8TQ76;A0A8V8TRI2 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 0 0 2 0 1 48.531 48.596 2 2.0286E-09 13805 20230619_1881_Aki_TMTPro18x_K_F2 192.12 175.54 62858 48538 49204 71910 59348 63612 64950 60529 71999 74019 73775 71326 76137 73074 71772 90181 88453 79925 57998 44632 51409 70528 61014 64872 65362 62452 73048 74016 75703 72630 77502 76175 74079 89725 84411 76053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58092000 3334 117 3182 6120 5053 5053 1 9606 Homo sapiens -0.048403906217117765 CVAALAR Unmodified 759.40614 0.40614318 3205 O00154-4;O00154-6;O00154-7;O00154;O00154-5;K7EKP8;O00154-2;O00154-3;B7Z957;Q6ZUV0 ACOT7;ACOT7L Cytosolic acyl coenzyme A thioester hydrolase;Putative cytosolic acyl coenzyme A thioester hydrolase-like yes no 0 0 0 1 0 1 38.455 38.455 2 0.0067404 9414 20230619_1880_Aki_TMTPro18x_K_F1 130.65 81.342 252100 209930 226850 220370 246360 285200 238170 242700 383600 91238 96264 72786 74537 73441 146120 76197 107990 58686 232940 192310 232790 222650 254600 282510 244920 246820 370100 100410 111280 74952 80361 75824 144810 75798 103360 56106 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127690000 3335 3205 3183 6121 5054 5054 1 9606 Homo sapiens 0.01681634993917669 CVAALTR Unmodified 789.41671 0.41670786 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 1 0 1 38.523 38.523 2 0.051919 9415 20230619_1880_Aki_TMTPro18x_K_F1 85.357 45.814 163400 118490 135670 142200 175520 188600 173690 167270 229880 124030 119500 109470 114610 88295 129220 115760 155880 104390 150770 108740 140760 142270 179240 186700 176830 171180 226300 127450 127550 111140 117860 93271 132520 115300 148530 99464 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84331000 3336 2126 3184 6122 5055 5055 1 9606 Homo sapiens 0.013576176483411473 CVANNQVETLEK Unmodified 1403.6715 0.67147858 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;A0A804HJI0;A0A804HJG8;A0A804HI44 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 4 0.707 1 2 1 45.501 45.561 2;3 1.4176E-12 11982 20230619_1883_Aki_TMTPro18x_K_F4 198.25 132.06 260350 216350 248720 257010 254460 283160 289930 278960 345530 301070 312390 304150 321610 274740 287240 324900 338760 328600 240670 198410 253780 256620 264900 284280 291960 285890 347420 303290 322400 307700 326380 287040 295730 325800 323550 312110 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 680220000 3337 1723 3185 6123;6124;6125;6126 5056;5057;5058;5059 5058 4 9606 Homo sapiens -0.014210301846105722 CVDFQTLK Unmodified 1009.4903 0.49026674 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;B1AHB2 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 7.5 0.5 1 1 52.439 52.516 3 0.010725 14615 20230619_1888_Aki_TMTPro18x_K_F8 72.968 43.621 83977 69398 76080 72615 87324 102240 98335 91534 94662 69833 78145 77363 78958 67103 79564 92822 86423 84469 77595 63571 78109 73499 90143 100900 98367 93668 95903 72011 81014 77928 80607 70897 81348 92356 82609 80325 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153060000 3338 2188 3186 6127;6128 5060;5061 5061 2 9606 Homo sapiens -0.014098786998374635 CVEDPETGLR Unmodified 1174.5288 0.52883709 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0;Q96IE3 PLEC;PLEC1 Plectin yes no 0 0 0 2 0 1 40.69 40.763 2 0.00037672 10154 20230619_1881_Aki_TMTPro18x_K_F2 110.41 96.829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3339 3921 3187 6129 5062 5062 1 9606 Homo sapiens -0.051446178559899636 CVELVHEEMQR Unmodified 1428.649 0.648969 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;O00429-7;H0YI79;A0A994J6A0;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 0 2 0 1 41.813 41.89 3 0.00064582 10720 20230619_1881_Aki_TMTPro18x_K_F2 83.314 56.8 228160 162140 222440 249030 290930 291270 251330 269010 322770 235500 300760 303950 252570 260010 232010 263810 261360 280850 210760 149210 227570 244760 295610 290770 257950 275450 323550 242060 307470 304010 258650 269610 238100 265950 249910 266500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158020000 3340 3212;3213 3188 6130 5063;5064 5064 2 9606 Homo sapiens -0.04820952853901872 CVFELPAENDKPHDVEINK Unmodified 2253.0736 0.073582234 3352 Q53XM7;O95292;Q6ZSP7;B3KVU7 VAPB Vesicle-associated membrane protein-associated protein B/C yes no 0 0 1 5.5 0.5 1 1 52.696 52.771 4 4.4257E-14 14954 20230619_1885_Aki_TMTPro18x_K_F5 119.38 104.14 202430 182800 198970 214030 157330 204750 190970 198560 206270 266930 253650 274690 280260 230330 242790 340320 313290 331350 187280 167570 201890 213500 167870 207590 191240 205130 211460 266200 259310 277040 283420 244900 251980 339380 299200 314740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 686640000 3341 3352 3189 6131;6132 5065 5065 1 9606 Homo sapiens -0.002831614127899229 CVGETATRPGR Unmodified 1202.5826 0.58260399 4203 Q8IVL6;Q8IVL6-2 LEPREL2 Prolyl 3-hydroxylase 3 yes no 0 0 1 6 0 1 28.128 28.16 3 0.030873 5155 20230619_1886_Aki_TMTPro18x_K_F6 50.09 36.582 13815 9672.1 13396 16594 20129 22231 18431 17382 17613 18583 18563 25605 21653 18111 19526 18248 23694 28805 12759 8914.3 13766 16242 20325 21930 18652 18129 18045 18925 19187 25385 21902 18950 20116 18928 22665 27228 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6416900 3342 4203 3190 6133 5066 5066 1 9606 Homo sapiens -0.010584006336330276 CVGGVVHSFDGTK Unmodified 1361.6398 0.63978452 2876 G5EA19;U3KQS5;E5RG17;Q6P1N9;E5RGF2;A0A0D9SGD3;Q6P1N9-2 TATDN1 Putative deoxyribonuclease TATDN1 yes no 0 0 0 8 0 1 45.195 45.223 3 2.6098E-06 11553 20230619_1888_Aki_TMTPro18x_K_F8 135.63 95.041 129100 102680 118990 123890 123790 146860 131850 131040 156410 131010 121950 130060 136810 111070 129140 141070 138770 134410 119280 94197 121830 123680 128550 146380 133220 134960 156560 132430 127470 131420 138780 116800 132050 140880 132650 127750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143500000 3343 2876 3191 6134 5067 5067 1 9606 Homo sapiens -0.026569781479111043 CVHIWNTQTGALVHSYR Unmodified 2040.9952 0.99521275 4477 Q9BZK7;C9JLJ1;B7Z475;A0A0D9SFI2 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes no 0 0 0 4 0 1 45.681 45.725 4 0.00033484 12065 20230619_1883_Aki_TMTPro18x_K_F4 83.253 70.375 255030 228710 242110 259420 324180 297660 311610 311090 325260 259740 264320 218160 244650 186170 266710 244300 245370 168580 235860 209590 248300 260060 329400 298600 315270 315450 328040 264040 272980 222490 251200 196180 269490 240460 234450 161210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98239000 3344 4477 3192 6135 5068 5068 1 9606 Homo sapiens 0.01635495583309421 CVICGGPGVSDAYYCK Unmodified 1804.7583 0.75826145 163 A0A024R1U2;Q7RTV0 PHF5A PHD finger-like domain-containing protein 5A yes no 0 0 0 8 0 1 52.608 52.682 3 1.0864E-05 14713 20230619_1888_Aki_TMTPro18x_K_F8 101.43 90.643 110290 90821 117370 119740 88822 91529 108630 89179 83759 151190 138900 140650 148590 115860 133830 142590 130280 164450 102040 83381 118200 118180 94896 94687 107700 93040 89235 149010 140380 142340 150520 121850 136210 144050 124930 155840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 270510000 3345 163 3193 6136 5069 5069 1 9606 Homo sapiens -0.11192735016675215 CVLNEGMPIYR Oxidation (M) 1366.6373 0.63734168 3532 P31689;P31689-2;B7Z5C0;Q9NXZ8 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 yes no 0 1 0 6 0 1 46.115 46.201 2 0.0062143 12232 20230619_1886_Aki_TMTPro18x_K_F6 78.149 58.878 41502 32715 35940 40841 34713 42630 42802 37129 42348 49183 48485 39595 47994 42813 35445 61645 50861 46736 38324 30023 36990 40593 36408 42839 42670 38651 43443 48772 49361 40803 48430 45029 37261 60730 48486 44563 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45824000 3346 3532 3194 6137 5070 5070 2193 1 9606 Homo sapiens -0.03131149877208372 CVLNEGMPIYR Unmodified 1350.6424 0.64242706 3532 P31689;P31689-2;B7Z5C0;Q9NXZ8 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 yes no 0 0 0 7.5 0.5 1 1 52.087 52.162 2 1.34E-08 14563 20230619_1887_Aki_TMTPro18x_K_F7 179.8 150 87804 81067 88247 85972 69621 91282 85501 87718 92817 111770 103780 92364 118120 90589 96289 126980 118530 107400 81258 74240 89326 86543 74328 91825 85576 90484 94690 111050 106500 94659 119010 95466 99690 125830 113110 102260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185240000 3347 3532 3194 6138;6139 5071 5071 1 9606 Homo sapiens -0.018868460145995414 CVLPEEDSGELAKPK Unmodified 1670.8185 0.81853675 4727 Q9Y3F4;Q9Y3F4-2;B0AZV0 STRAP Serine-threonine kinase receptor-associated protein yes no 0 0 1 4.5 0.5 1 1 48.867 48.924 3 1.32E-05 13496 20230619_1883_Aki_TMTPro18x_K_F4 113.53 104.71 116130 102170 123310 123540 104340 123430 127790 115790 117060 145950 140660 90549 125010 78110 129880 94076 78748 55439 107490 93691 124400 123030 110500 124650 127210 119640 120920 144130 142210 94082 128020 81950 128960 92271 75679 53151 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187310000 3348 4727 3195 6140;6141 5072 5072 1 9606 Homo sapiens 0.009960219096683431 CVMTSRPR Unmodified 1005.4848 0.4848042 3286 O60783;B2R4A5 MRPS14 28S ribosomal protein S14, mitochondrial yes no 0 0 1 4 0 1 28.329 28.401 3 0.011939 5029 20230619_1883_Aki_TMTPro18x_K_F4 71.877 42.96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3349 3286 3196 6142 5073 5073 1 9606 Homo sapiens -0.017718807632945754 CVNLVQK Unmodified 859.45857 0.45857268 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;Q92973-3;A0A7P0T944;A0A7P0T9C0 TNPO1 Transportin-1 yes no 0 0 0 1.5 0.5 1 1 45.264 45.304 2 0.0044359 12265 20230619_1881_Aki_TMTPro18x_K_F2 148.28 87.923 129690 92203 130190 125630 128530 154780 134250 117660 153910 116140 128670 124020 121280 100430 108360 110650 167860 136810 119820 84731 132170 124470 133910 153390 135630 122790 154550 117800 132840 124740 123460 104970 113690 112480 159820 129780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79320000 3350 629 3197 6143;6144 5074 5074 1 9606 Homo sapiens 0.02322173336870037 CVNTTLQIK Unmodified 1075.5696 0.56957969 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;B4DNY3;B4DNA3;B4DUZ8 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 0 0 2 0 1 48.255 48.326 3 0.00088291 13661 20230619_1881_Aki_TMTPro18x_K_F2 100.02 33.747 292770 227550 254860 233650 243350 277480 268460 244220 328410 248920 247280 246410 261330 210500 279440 262630 300160 255980 270340 208460 261740 236210 254620 276600 271030 251980 327740 251440 258220 249070 267120 221140 284860 262780 286690 243360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 306560000 3351 2327 3198 6145 5075 5075 1 9606 Homo sapiens 0.03481768254300732 CVQSNIVLLTQAFR Unmodified 1647.8767 0.87666075 3339 O94925-3;A8K132;O94925;Q53TX0 GLS Glutaminase kidney isoform, mitochondrial yes no 0 0 0 6 0 1 62.987 63.035 3 0.00064967 19499 20230619_1886_Aki_TMTPro18x_K_F6 68.283 52.712 41234 37355 39819 50332 42655 48955 45453 47611 60739 48168 63119 51879 60796 42250 54329 67271 53751 69460 38143 34292 40676 49722 44200 49565 46147 48757 61038 48786 64456 52267 61743 45271 55408 67268 51543 65893 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 315450000 3352 3339 3199 6146 5076 5076 1 9606 Homo sapiens 0.07863748345607746 CVSCLPGQR Unmodified 1075.4903 0.49028351 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 4.5 3.5 1 1 38.409 38.402 2 8.7987E-05 8855 20230619_1888_Aki_TMTPro18x_K_F8 157.58 132.58 124230 94358 107080 105820 121840 119450 129840 123130 156060 129670 132710 135290 151250 119570 112660 156820 168960 151600 114690 86517 110400 106160 125560 119900 131220 125720 156530 130930 138050 136600 151960 125870 118580 156560 160990 144110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84917000 3353 1292 3200 6147;6148 5077;5078 5078 2 9606 Homo sapiens -0.04444201971455186 CVSCQNLNPSNK Unmodified 1419.6235 0.62348253 3613 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 8 0 1 41.486 41.483 3 0.00019806 10096 20230619_1888_Aki_TMTPro18x_K_F8 98.182 86.037 21396 14955 19349 22275 21457 29097 26298 26312 31403 24521 30487 27448 24722 20567 26248 24513 28015 24717 19750 13758 19887 21969 22304 28814 26386 27021 31625 24977 31051 27511 25485 21650 26751 24590 26765 23487 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19564000 3354 3613 3201 6149 5079 5079 1 9606 Homo sapiens -0.06954427376308558 CVSTLLDLIQTK Unmodified 1389.7538 0.75375164 1172;3819 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087X253;B4DWG4;B4E261;A0A087WZQ6;A0A087WU93;A0A087WYD1;H7C034;K7EJ01;Q10567-4;Q10567-3;Q10567-2;Q10567;C9J1E7 AP2B1;DKFZp781K0743;AP1B1 AP-2 complex subunit beta;AP complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 3 0 1 64.343 64.375 3 0.0021174 20296 20230619_1882_Aki_TMTPro18x_K_F3 76.255 55.874 13935 10276 13687 13982 12706 11704 13558 17432 12977 20021 20380 17530 20179 14666 16446 25039 23721 20506 12876 9441.3 13907 13792 13276 12143 13625 17467 13577 19993 20529 17836 20412 15778 17238 24713 22603 19537 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40046000 3355 1172;3819 3202 6150 5080 5080 1 9606 Homo sapiens 0.07446491894324936 CVTSELLK Unmodified 948.49502 0.49501776 3162;3172 K7EL20;O75821;Q6IAM0;A8K5K5;K7ENA8;K7ENH0;B0AZV5;K7EL60;K7ER90 EIF3G Eukaryotic translation initiation factor 3 subunit G no no 0 0 0 6.5 0.5 1 1 50.651 50.73 2 0.0006503 13867 20230619_1887_Aki_TMTPro18x_K_F7 159.2 96.482 245780 192930 209960 214600 204070 266480 236720 228970 293190 233820 222010 186460 235520 166480 224710 254080 247560 191330 226930 176860 216250 215680 213820 264610 238480 236610 292520 234770 231500 190990 239270 177130 230100 250330 236260 182600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 634220000 3356 3162;3172 3203 6151;6152 5081;5082 5082 2 9606 Homo sapiens 0.018710054429334377 CVVILPDSVR Unmodified 1156.6274 0.62742892 3548 P35520;P35520-2;B7Z2D6;B7Z6W5;Q9NTF0;H7C2H4;Q96EH7 CBS;DKFZp727E011 Cystathionine beta-synthase yes no 0 0 0 8 0 1 52.63 52.704 2 9.3374E-07 14712 20230619_1888_Aki_TMTPro18x_K_F8 140.35 109.64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3357 3548 3204 6153 5083 5083 1 9606 Homo sapiens 0.055380301797185894 CVVTGEDGSESEATVNVK Unmodified 1879.8469 0.84693634 806;3082 P13591-1;A0A087WTF6;P13591;P13591-3;P13591-4;A0A087WV75;A0A087WWD4;A0A087WX77;A0A087WTE4;P13591-5;P13591-6;O00557;H7BYX6 NCAM1 Neural cell adhesion molecule 1 no no 0 0 0 2 0.816 1 1 1 47.013 47.064 3 1.3107E-13 12825 20230619_1882_Aki_TMTPro18x_K_F3 147.12 137.59 24161 21663 25076 29226 30688 27587 29982 28988 33963 34776 34070 41711 42369 32848 32008 33281 37527 43593 22362 19887 25500 28865 31362 28068 30392 29685 34406 35038 35357 41682 42465 34227 33042 34012 35894 41273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206090000 3358 806;3082 3205 6154;6155;6156 5084 5084 1 9606 Homo sapiens -0.05779324971695132 CVVVGDGAVGK Unmodified 1059.5383 0.53827956 1881;614;3680;3768 A0A024RAA5;P60953;B4E1U9;P60953-1;A0A8Q3WLC5;A0A024RAE6;A0A590UJK8;A0A8Q3SI43;Q5JYX0;Q9UJM1;A0A494BZX6;Q9UJM0;A0A494C1M1;A0A8Q3WKT2;A0A3B3IRV0;G3V4H1;Q59FQ0;G3V476;B1AH79;F8WET9;Q9H4E5-2;V9HWD0;A0A024R692;Q7Z513;Q59G91;P17081;Q9H4E5;Q6ICQ8;P84095;A4D2P1;A4D2P0;A0A994J6T1;P63000;P63000-2;A0A024R1P2;P15153;B1AH78;P60763 CDC42;RHOJ;RAC2;RHOQ;HEL-S-42;ARHG;RHOG;RAC1;RAC3 Cell division control protein 42 homolog;Rho-related GTP-binding protein RhoJ;Rho-related GTP-binding protein RhoQ;Rho-related GTP-binding protein RhoG;Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2;Ras-related C3 botulinum toxin substrate 3 no no 0 0 0 6.5 0.5 2 2 45.786 45.873 2;3 9.7899E-06 11681 20230619_1887_Aki_TMTPro18x_K_F7 175.91 136.89 1090100 978010 995360 922870 1030700 1119000 1058700 908710 1173000 1417200 1433000 1426700 1593600 1364700 1221600 1697800 1764200 1561100 1007900 894890 1019000 939910 1068700 1112800 1069500 956770 1200300 1405400 1464600 1446100 1604200 1427100 1281200 1691700 1681400 1484900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1703799999.9999998 3359 614;3768;1881;3680 3206 6157;6158;6159;6160 5085;5086;5087;5088 5088 4 9606 Homo sapiens 0.010891952202200628 CVYSTTK Unmodified 857.3953 0.39530372 4445 Q9BUT1;D6R9P2;Q9BUT1-3 BDH2;SLC9B2 3-hydroxybutyrate dehydrogenase type 2 yes no 0 0 0 8 0 1 39.102 39.089 2 0.012826 9104 20230619_1888_Aki_TMTPro18x_K_F8 114.78 63.817 13921 7525.9 15185 13941 41302 42314 19361 27028 27058 11857 18406 16654 14440 15553 19789 11685 24104 19556 12855 6952.9 15697 13898 40235 40268 21036 28212 26753 12982 19114 16669 15151 15870 20218 12272 22990 18507 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7833500 3360 4445 3207 6161 5089 5089 1 9606 Homo sapiens -0.039098121710367195 CVYTIPAHQNLVTGVK Unmodified 1798.94 0.93998929 2249 Q6IAP9;Q5T1M7;B2R7V4;Q59EL4;O43172-2;O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes no 0 0 0 3 0 1 50.125 50.201 3 1.1778E-05 14218 20230619_1882_Aki_TMTPro18x_K_F3 99.747 80.169 67074 55747 67981 71932 77699 84269 84501 72341 87329 92660 78777 82069 104770 75570 80166 88055 105840 100210 62035 51167 69160 71460 80089 84008 84858 75296 88567 92244 82380 83532 104870 78932 83402 88941 100980 95073 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198450000 3361 2249 3208 6162 5090 5090 1 9606 Homo sapiens 0.07247689062819518 CWQNHCR Unmodified 1059.4127 0.41270189 1592 Q13620-3;A0A7P0T954;Q13620;Q13620-1;K4DI93;A0A669KAX4;A0A7P0TAQ3;A0A7P0T9L3;A0A7P0T8P8;A0A7P0T9C8;A0A804CL36;A0A7P0T9D0;A0A669KBG9;A0A7P0T9P5;A0A7P0TAF9;A0A7P0T9R8;A0A7P0Z4G9 CUL4B Cullin-4B yes no 0 0 0 8 0 1 27.862 27.892 3 0.0014123 4925 20230619_1888_Aki_TMTPro18x_K_F8 144.29 124.82 14063 8670.7 11383 10594 15443 16414 15210 13409 22704 6610 11018 8576.3 8976.5 9063.4 9225.1 6173 7537.8 6808.2 12963 7964.2 11843 10618 15729 16086 15562 13728 22175 7144 11747 8647.2 9249.9 9172.8 9266 6299.2 7223.4 6462.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4584400 3362 1592 3209 6163 5091 5091 1 9606 Homo sapiens -0.11462795117017777 CWYIHDLLK Unmodified 1246.6169 0.61686423 4723 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 yes yes 0 0 0 2 0 1 57.99 58.005 3 0.00018041 17799 20230619_1881_Aki_TMTPro18x_K_F2 116.3 70.945 63955 57867 54796 55743 58344 77992 69307 66879 90526 29580 26815 27190 26563 22275 45368 28401 32241 29451 59106 52956 56509 56796 60781 76906 69836 68091 88277 31947 30545 27575 28034 23470 44982 28555 30956 27971 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23049000 3363 4723 3210 6164 5092 5092 1 9606 Homo sapiens 0.003420475253051336 CYEMASHLR Oxidation (M) 1181.4958 0.49576282 3400 P07737;K7EJ44;CON__P02584 PFN1 Profilin-1 yes no 0 1 0 5.6 1.28 1 1 2 3 3 32.566 32.633 3 5.3943E-05 6243 20230619_1883_Aki_TMTPro18x_K_F4 142.56 124.25 202710 132740 191590 194220 222020 247580 216160 222990 245120 219580 249950 224630 234830 197100 221420 240660 261140 202950 187120 122130 196020 191720 228120 245650 219240 229350 248180 222310 255380 227030 239530 206470 227670 239010 249070 193370 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 712970000 3364 3400 3211 6165;6166;6167;6168;6169;6170;6171;6172;6173;6174 5093;5094;5095;5096;5097;5098 5093 2011 6 9606 Homo sapiens -0.08772523179686686 CYEMASHLR Unmodified 1165.5008 0.5008482 3400 P07737;K7EJ44;CON__P02584 PFN1 Profilin-1 yes no 0 0 0 6.5 1.12 1 1 1 1 37.459 37.514 3 2.8756E-12 8258 20230619_1887_Aki_TMTPro18x_K_F7 219.54 162.73 575120 446600 560070 528840 584580 628820 622820 624070 657920 607590 674740 672600 667460 578480 628810 614890 791790 612550 531510 409660 570360 528860 606140 628250 627000 637370 668800 616920 691220 676640 679840 601640 648910 617370 754760 582480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1402400000 3365 3400 3211 6175;6176;6177;6178 5099;5100;5101 5100 3 9606 Homo sapiens -0.07528219317077856 CYGFVTMSTAEEATK Unmodified 1693.7328 0.73275821 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959 SAFB Scaffold attachment factor B1 yes no 0 0 0 5.67 0.471 1 2 56.271 56.339 3 1.7663E-10 16579 20230619_1886_Aki_TMTPro18x_K_F6 148.08 128.76 83345 59780 66889 68987 55913 76159 72972 78111 81643 92001 74883 73923 101980 83945 75576 105410 93817 93648 76881 54840 69181 69034 59567 76487 72882 79997 82519 91681 78312 76238 101970 87416 78485 104840 89586 89072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 289730000 3366 2020 3212 6179;6180;6181 5102;5103 5102 2 9606 Homo sapiens -0.08635886267484238 CYGLHAFIVPIR Unmodified 1444.7649 0.76492545 524 B4DU07;A0A024R8T3;A0A024R8L7;Q15067-3;Q15067-2;Q15067 ACOX1 Acyl-coenzyme A oxidase;Peroxisomal acyl-coenzyme A oxidase 1 yes no 0 0 0 6 0 1 55.022 55.098 3 0.00089407 16060 20230619_1886_Aki_TMTPro18x_K_F6 87.568 66.196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3367 524 3213 6182 5104 5104 1 9606 Homo sapiens 0.06033358779154696 CYLFGGLANDSEDPK Unmodified 1684.7403 0.74028642 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4;Q05C05;P51610-3 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 5.5 0.5 1 1 59.5 59.558 3 0.0073804 17926 20230619_1886_Aki_TMTPro18x_K_F6 67.095 56.151 41359 36609 39111 38614 34945 44876 43410 42172 53667 32244 32079 32672 37607 33924 42189 39443 36643 39707 38246 33529 39861 38936 36923 44837 43583 43009 53164 33183 34195 33215 38443 35238 42499 39574 35134 37700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82961000 3368 1331 3214 6183;6184 5105 5105 1 9606 Homo sapiens -0.07469410675571453 CYPDRVDYVDK Unmodified 1428.6344 0.63436479 4389 Q96QK1;Q53FR4;Q5HYM2 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 yes no 0 0 1 4.5 0.5 1 1 44.119 44.18 3 0.0015717 11349 20230619_1883_Aki_TMTPro18x_K_F4 89.301 71.569 211340 147530 185970 183170 181860 190080 201870 200130 193800 225130 239560 234010 247700 214800 231280 267120 272140 260150 195040 135450 190920 182210 189680 191960 202240 204440 199860 226370 243990 236610 251820 224940 237910 267100 259900 247210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206850000 3369 4389 3215 6185;6186 5106 5106 1 9606 Homo sapiens -0.06280701730383953 CYQSEFGR Unmodified 1045.4287 0.42872911 2493 B4DT77;B4DWU2;B4DHY4;Q53HM8;P20073-2;P20073;B2R7L2;B2R657 ANXA7 Annexin;Annexin A7 yes no 0 0 0 5 0 1 39.257 39.349 2 0.00053107 9254 20230619_1885_Aki_TMTPro18x_K_F5 161.9 151.43 56471 43060 49972 54382 57043 54735 66711 62308 82282 68980 75651 68380 78787 66693 68404 81266 86307 83842 52145 39527 51436 54004 58918 55518 67153 63317 82630 69369 78008 69442 79837 69634 70797 81535 82387 79615 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162000000 3370 2493 3216 6187 5107 5107 1 9606 Homo sapiens -0.0921681039910709 CYYYHAR Unmodified 1031.4283 0.42833518 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;O43242-2;H0YGV8 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 5.33 3.09 1 1 1 32.345 32.378 3 0.00079371 6955 20230619_1880_Aki_TMTPro18x_K_F1 149.94 144.11 80295 54981 71982 75362 90650 93784 96677 93620 119300 75535 85819 99502 86831 86681 82439 84877 103560 92674 74108 50537 74119 74666 92841 93421 97770 95175 118770 78121 89768 99457 88509 89672 85078 85771 98803 87980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61456000 3371 2361 3217 6188;6189;6190 5108;5109 5108 2 9606 Homo sapiens -0.08612185328320265 DAAAFLLSCQIPGLVK Unmodified 1701.9124 0.91237755 1549 A0A494C0R8;K7EIG1;O75153 CLUH Clustered mitochondria protein homolog yes no 0 0 0 3.5 0.5 1 1 64.456 64.476 3 0.003158 20342 20230619_1882_Aki_TMTPro18x_K_F3 70.281 51.205 9969.6 7742.4 11849 12529 12985 10589 11091 11056 13843 13414 15261 14537 16518 13241 14585 17329 17323 15539 9230.1 7127.1 11895 12229 13316 10871 11384 11331 14006 13466 15640 14673 16723 13917 15030 17241 16536 14784 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40228000 3372 1549 3218 6191;6192 5110 5110 1 9606 Homo sapiens 0.08949785802610677 DAAAPAEPQAQHTR Unmodified 1461.6961 0.69605384 1106 A0A804HIL0;A0A804HKM5;A0A804HK77;A0A804HIL2;A0A0S2Z4V6;A0A669KAX3;O76024 WFS1 Wolframin yes no 0 0 0 2 0 1 27.767 27.843 3 7.4046E-07 4925 20230619_1881_Aki_TMTPro18x_K_F2 130.61 114.26 3377.5 1758.2 1497.7 2851 4141.3 4276.1 4898.3 3642.2 4916.2 1883.3 4195.4 3400.5 3979.5 2446.7 3293.7 2381.5 3746.6 2842.3 3101.6 1621.7 1727.5 2803.5 4113.7 4199.4 4886.1 3721.3 4963.1 2049.7 4323.1 3356.4 4029.4 2555.4 3380.6 2423.5 3574.1 2698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15730000 3373 1106 3219 6193 5111 5111 1 9606 Homo sapiens -0.01632633986878318 DAAAVGNHVAK Unmodified 1051.5411 0.54105675 3858 Q13564-3;Q13564-2;Q13564;Q13564-4 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes no 0 0 0 5.5 0.5 1 1 34.927 34.997 3 4.4688E-05 7613 20230619_1886_Aki_TMTPro18x_K_F6 121.68 73.856 68678 36682 85895 83499 121700 131710 93815 116060 118850 78751 115940 131690 101510 99565 106470 53695 127580 111430 63498 34008 86339 81017 122810 129060 97045 118560 119390 83249 118580 130060 104400 101320 109030 58125 121750 105280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72335000 3374 3858 3220 6194;6195 5112;5113 5113 2 9606 Homo sapiens 0.0173478666936262 DAAAVLVSR Unmodified 900.50288 0.50288033 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;A0A804HI02;B4DE53;I6L959;Q9BTW9-5;A0A804HIC0;A0A804HL21;A0A804HKB9 TBCD Tubulin-specific chaperone D yes no 0 0 0 5.5 0.5 1 1 43.899 43.985 2 0.0016704 11232 20230619_1886_Aki_TMTPro18x_K_F6 113.62 77.227 153710 126090 151980 154310 162660 170470 172380 164170 201700 169700 204150 204460 183780 173890 188510 190630 220720 207080 142120 115670 154700 153760 168330 171040 174150 168340 203760 172330 208480 204970 188590 181180 193390 192230 210780 196560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 272770000 3375 1722 3221 6196;6197 5114 5114 1 9606 Homo sapiens 0.048649007547169276 DAADLLSPLALLR Unmodified 1366.782 0.78201531 2843 D6RIZ4;D6RA47;D6RE79;Q14728 MFSD10 Major facilitator superfamily domain-containing protein 10 yes no 0 0 0 4.5 3.5 1 1 65.328 65.338 2 9.7383E-16 20658 20230619_1880_Aki_TMTPro18x_K_F1 215.06 185.91 30370 31766 30934 30021 28845 35192 32500 34633 36745 39397 40942 47271 41211 37768 51673 39796 41991 53032 28135 29052 31344 30559 30252 35194 32708 35539 37376 39787 41892 47274 42553 39384 51763 40737 40347 50189 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20932000 3376 2843 3222 6198;6199 5115;5116 5115 2 9606 Homo sapiens 0.11329557865929019 DAAFEALGTALK Unmodified 1205.6292 0.62920306 3873 Q14008-2;Q14008;Q14008-3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 7 0 1 61.728 61.767 3 5.7488E-05 18577 20230619_1887_Aki_TMTPro18x_K_F7 116.74 93.361 114380 90505 106970 115860 88062 112020 104990 104210 125530 140610 135340 133680 144190 115220 138010 150110 147620 152000 105680 83078 109060 114860 93585 113360 105570 108000 127200 139930 138790 135400 146540 121360 141040 150350 141170 144330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170050000 3377 3873 3223 6200 5117 5117 1 9606 Homo sapiens 0.0346136246930655 DAAGLECKPR Unmodified 1115.5393 0.53934219 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1 SRRT Serrate RNA effector molecule homolog yes no 0 0 1 5.5 0.5 1 1 37.16 37.24 3 0.0037325 8383 20230619_1885_Aki_TMTPro18x_K_F5 79.311 58.975 197130 128940 177310 202600 211330 220000 221360 210670 282590 236320 247210 206750 238440 192540 200060 193380 242780 179170 181900 118730 182430 198650 217120 220870 224420 216570 282880 236690 254580 210780 241780 199190 206400 193600 231440 170560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 206410000 3378 4464 3224 6201;6202 5118;5119 5118 2 9606 Homo sapiens -0.013805904108949107 DAAGSGDKPGADTGR Unmodified 1373.6171 0.61713482 4342 Q96EL3 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 0 0 1 2.5 0.5 1 1 31.847 31.917 3 0.0086966 6348 20230619_1882_Aki_TMTPro18x_K_F3 80.719 62.354 20043 10328 25600 26440 35994 37504 24880 34336 35017 24944 36681 38159 24975 32462 34550 17516 40111 36029 18533 9599.2 25696 25488 36255 36979 26075 35015 35118 26130 37065 37917 26397 32850 35172 18941 38296 34039 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32037000 3379 4342 3225 6203;6204 5120 5120 1 9606 Homo sapiens -0.054729060118233974 DAAIYLVTSLASK Unmodified 1350.7395 0.73948179 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DM67 CSE1L Exportin-2 yes no 0 0 0 3 0 1 64.245 64.277 3 5.2634E-06 20234 20230619_1882_Aki_TMTPro18x_K_F3 125.03 106.9 147070 121270 135200 142410 134340 141550 140840 142380 166080 169250 166970 158070 171680 149650 156530 174010 158180 162990 135910 111200 138340 142110 139790 143270 142460 146120 167860 169280 171410 160720 174360 155920 159630 173830 151360 154910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 330870000 3380 1462 3226 6205 5121 5121 1 9606 Homo sapiens 0.07814162737713559 DAALATALGDK Unmodified 1044.5451 0.54513908 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 LMNB1 Lamin-B1 yes no 0 0 0 5 0 1 53.609 53.679 2 2.6719E-07 15333 20230619_1885_Aki_TMTPro18x_K_F5 180.15 128.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3381 3482 3227 6206 5122 5122 1 9606 Homo sapiens 0.02464831372435583 DAANLLNDALAIR Unmodified 1368.7361 0.73612775 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 0 7 0 1 62.792 62.827 3 0.030937 19102 20230619_1887_Aki_TMTPro18x_K_F7 50.108 31.202 16343 12698 12828 18471 13175 15113 19491 15741 15749 22635 26450 26391 31556 21781 24120 31960 27094 24990 15080 11674 13368 18122 13825 15548 19165 16243 16704 22604 26854 26481 31651 23165 24865 31541 25880 23817 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 477450000 3382 3808 3228 6207 5123 5123 1 9606 Homo sapiens 0.06650912683699062 DAAVMAFGCILEGPEPSQLK Unmodified 2132.0282 0.028211946 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 0 0 7 0.816 1 1 1 64.153 64.185 4 0.00014515 19747 20230619_1887_Aki_TMTPro18x_K_F7 76.155 60.389 29609 13131 28351 38215 33700 45257 37215 37707 44959 50654 32853 74530 76809 57745 42977 71230 70419 118110 27291 12250 29059 36548 34751 44984 37543 39401 44999 51214 36459 73864 75375 60935 45979 73867 67442 111510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154900000 3383 3904 3229 6208;6209;6210 5124 5124 1 9606 Homo sapiens 0.007478968005216302 DACDGHEIGR Unmodified 1128.4618 0.46182015 4301 Q92621;B4DE72;Q6P486;U3KPX2 NUP205 Nuclear pore complex protein Nup205 yes no 0 0 0 1 0 1 28.619 28.619 3 2.4626E-06 5423 20230619_1880_Aki_TMTPro18x_K_F1 158.47 134.48 22711 12832 25578 26985 37960 35851 28732 35857 36655 22002 33974 35422 34444 30076 29171 12581 37316 29267 20981 11876 25929 26180 38159 35562 29766 36239 36734 23407 35006 35141 34897 30289 30105 13923 35570 27651 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48393000 3384 4301 3230 6211 5125 5125 1 9606 Homo sapiens -0.09727228347082928 DACELIER Unmodified 1004.4597 0.45969489 3034 H0Y9X1;Q96EY4;D6RA57;D6RE67;D6RC31;B7Z504 TMA16 Translation machinery-associated protein 16 yes no 0 0 0 1.5 0.5 1 1 43.521 43.521 2 0.0018013 11443 20230619_1881_Aki_TMTPro18x_K_F2 113.26 87.429 141410 110540 125100 121500 139950 147780 144070 141860 180920 155690 146790 147510 177780 138640 119750 174330 187220 175650 130600 101330 128630 122220 144340 147370 146130 145680 180870 156430 153490 149850 177700 145270 126800 174510 178400 166860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104460000 3385 3034 3231 6212;6213 5126;5127 5127 2 9606 Homo sapiens -0.04235657084871036 DADAGDEDEESEEPR Unmodified 1662.6129 0.61289688 2354 B3KMQ6;Q9NZT2-2;Q9NZT2;V9H0E3;V9H0H8 OGFR Opioid growth factor receptor yes no 0 0 0 1 0 1 33.423 33.423 2 1.8386E-05 7358 20230619_1880_Aki_TMTPro18x_K_F1 117.23 105.02 4399.6 1892.5 6104.8 4967.6 10543 11865 6583.8 9741.5 6089.3 6207.8 9308.3 11389 8809.6 9799.7 7835.8 1975.9 9759.6 9942.9 4069.2 1761.9 6119 4848.4 10490 11415 6864.7 9988.6 6362.1 6618.1 9390.9 11253 8974.4 9745.7 8057.2 2579.7 9320.6 9358.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11502000 3386 2354 3232 6214 5128 5128 1 9606 Homo sapiens -0.19190504806670106 DADLTDTAQTR Unmodified 1205.5524 0.5524093 1246 A0A140VKC8;Q13630;E9PKL9;E9PLH9;B3KU96;B4DZW9;E9PP14;A0A0J9YX13 TSTA3 GDP-L-fucose synthase yes no 0 0 0 1 0 1 37.042 37.042 2 1.7017E-16 8797 20230619_1880_Aki_TMTPro18x_K_F1 219.72 196.64 47852 27206 53337 57237 89249 88002 64998 73991 87648 58711 80979 83166 80652 72149 71454 41726 91169 83956 44205 25178 54274 55666 89154 86291 67648 76108 87652 60963 83383 82885 81924 73216 73732 44894 86989 79321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71707000 3387 1246 3233 6215 5129 5129 1 9606 Homo sapiens -0.04214480817813637 DADPILISLR Unmodified 1111.6237 0.62372375 343 A0A024R5K1;Q9BR76;Q9NSK3 CORO1B;DKFZp762I166 Coronin;Coronin-1B yes no 0 0 0 4.5 0.5 1 1 57.868 57.899 2 8.1568E-07 17043 20230619_1885_Aki_TMTPro18x_K_F5 182.39 133.83 185770 154500 174890 178550 167580 207540 196260 192610 234140 224240 216370 216170 235790 193660 225640 241100 221400 249920 171710 141660 178510 178760 175660 207300 197390 198630 235720 224720 223700 219070 239500 203090 229490 241970 212070 237180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 89510000 3388 343 3234 6216;6217 5130;5131 5131 2 9606 Homo sapiens 0.07237683677522 DADSSISVLEIHSQK Unmodified 1627.8053 0.80532952 4397 Q96T23-2;Q96T23;H0YER1;Q96T23-3;H0YCN2 RSF1 Remodeling and spacing factor 1 yes no 0 0 0 4.5 0.5 1 1 49.649 49.704 3 9.3383E-19 13842 20230619_1883_Aki_TMTPro18x_K_F4 200.16 154 138780 122080 133910 166640 145120 156190 163320 144750 174380 174130 175880 177630 187430 173170 164570 198970 199620 220600 128350 112100 136810 164410 150300 158470 163920 149570 177130 174550 180900 180040 189960 180130 169880 200640 190800 209220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153250000 3389 4397 3235 6218;6219 5132 5132 1 9606 Homo sapiens 0.016539071219312973 DAEAWFNEK Unmodified 1108.4825 0.48253882 1272 P13645;CON__P13645;A0A1B0GVI3;Q7Z3Y7;CON__Q7Z3Y7;CON__Q148H6;CON__Q7Z3Y8;CON__Q7Z3Z0;Q7Z3Z0;Q7Z3Y8 KRT10;KRT28;KRT25;KRT27 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27 yes no 0 0 0 3.5 0.5 1 1 55.546 55.557 3 0.00083378 16433 20230619_1883_Aki_TMTPro18x_K_F4 91.584 71.797 + 27891 29353 46209 39711 501470 49341 41660 44503 66107 21101 23787 29692 22568 103030 31010 19995 24710 23500 25976 26934 51431 39384 468580 50473 69355 45173 64842 23045 26404 32210 24056 99080 30975 21736 23695 22288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65878000 3390 1272 3236 6220;6221 5133;5134 5134 2 9606 Homo sapiens -0.06736314695763213 DAEDALHNLDR Unmodified 1267.5793 0.57929275 1114 Q5JRI1;Q53GD7;A0A0S2Z504;O75494-5;O75494-4;O75494-6;O75494-3;O75494-2;O75494 SRSF10 Serine/arginine-rich splicing factor 10 yes no 0 0 0 1 0 1 43.315 43.315 3 1.6489E-07 11546 20230619_1880_Aki_TMTPro18x_K_F1 168.71 135.49 49207 31896 44223 50585 51815 69822 48830 47568 91039 51810 57607 59652 60584 56773 55212 57974 59798 64192 45403 29377 45503 49745 53344 68572 50672 50253 88892 52500 60803 60101 61537 58703 56507 58587 57200 60888 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70318000 3391 1114 3237 6222 5135 5135 1 9606 Homo sapiens -0.043793722066538976 DAEDAMDAMDGAVLDGR Oxidation (M) 1766.7087 0.7087283 539 J3KP15;Q53FN0;A0A024R8U5;Q01130;B3KUY1;J3QL05;Q8NAK9;Q01130-2 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 yes no 0 1 0 1 0 3 50.52 50.52 2;3 3.4432E-13 15385 20230619_1880_Aki_TMTPro18x_K_F1 158.25 135.72 101370 87275 99636 107540 105850 110320 110190 97495 110590 122980 118390 115750 118580 102460 121960 117720 112050 115600 93750 80057 101490 106970 109500 111090 110870 101220 113050 122700 121130 117360 121160 106930 123390 117960 107330 109810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 212210000 3392 539 3238 6223;6224;6225 5136;5137;5138 5138 313;314 3 9606 Homo sapiens -0.1439577149183151 DAEDAMDAMDGAVLDGR 2 Oxidation (M) 1782.7036 0.70364292 539 J3KP15;Q53FN0;A0A024R8U5;Q01130;B3KUY1;J3QL05;Q8NAK9;Q01130-2 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 yes no 0 2 0 1 0 1 43.614 43.614 2 5.6822E-05 11684 20230619_1880_Aki_TMTPro18x_K_F1 93.766 88.782 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3393 539 3238 6226 5139 5139 313;314 1 9606 Homo sapiens -0.15640075354440341 DAEDAMDAMDGAVLDGR Unmodified 1750.7138 0.71381368 539 J3KP15;Q53FN0;A0A024R8U5;Q01130;B3KUY1;J3QL05;Q8NAK9;Q01130-2 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 yes no 0 0 0 2 0 1 60.735 60.746 3 2.3952E-06 18921 20230619_1881_Aki_TMTPro18x_K_F2 107.78 103.31 44820 37982 44708 45564 36861 34108 43151 41758 48403 50931 47607 41755 54300 44862 42978 51625 44412 50403 41452 34833 45300 45264 39027 35567 43325 42394 49012 50699 49126 42930 54654 46550 44032 51679 42521 47864 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65756000 3394 539 3238 6227 5140 5140 1 9606 Homo sapiens -0.1315146762922268 DAEDAVYGR Unmodified 994.43559 0.43558863 3140 J3KTL2;Q07955;Q59FA2;Q07955-3;Q07955-2 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 1.5 0.5 1 1 37.79 37.79 2 0.0005082 9091 20230619_1880_Aki_TMTPro18x_K_F1 158.56 138.04 109140 73828 91361 124070 123260 170000 135690 120810 217720 157360 196040 199710 192410 171220 155920 170590 209330 210430 100680 68035 95030 121590 126310 167120 138490 127840 216010 158580 201930 199810 194860 177520 162210 173640 199770 199440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192620000 3395 3140 3239 6228;6229 5141;5142 5141 2 9606 Homo sapiens -0.0618517424690026 DAEEALR Unmodified 802.3821 0.38209649 955 A0A0A0MSK5;Q5JTV8;Q5JTV8-3;J3KN66;H0Y4R4 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 0 0 0 1 0 1 35.333 35.333 2 0.003791 8108 20230619_1880_Aki_TMTPro18x_K_F1 152.63 68.275 73623 36134 81286 96683 131360 138160 107270 115000 140110 86811 127920 140870 117470 105740 121970 56207 150820 140770 67965 33624 82780 93037 131810 135910 110550 118320 140180 90989 131460 139220 120500 107690 125160 62237 143960 132850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101990000 3396 955 3240 6230 5143 5143 1 9606 Homo sapiens -0.02699926958746346 DAEEEGGDQAGQNIR Unmodified 1587.6761 0.67610626 2091 B4DET0;A8K6G9;Q92620;H3BV01;H3BQT9;J3KRT1 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes no 0 0 0 1 0 1 33.665 33.665 3 1.9181000000000001E-25 7445 20230619_1880_Aki_TMTPro18x_K_F1 232.13 207.2 22596 15538 23670 25477 29935 37033 21771 33877 36340 31183 37263 38340 39103 32862 26485 26269 45633 41428 20881 14313 24059 25046 30440 36467 22912 34709 36224 31885 38249 38390 39264 33753 28204 27357 43447 39204 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36797000 3397 2091 3241 6231 5144;5145 5144 2 9606 Homo sapiens -0.09422474508119194 DAEGILEDLQSYR Unmodified 1507.7155 0.71545188 572 Q9NUQ9;A0A024R9G4;A0A8V8TMP7;Q68D08;E5RI16;E5RJL8;E5RIR8;E5RJE1;E5RGI7;E5RHU5;E5RFS4;E5RK61 FAM49B;DKFZp686B04128 Protein FAM49B yes no 0 0 0 3.5 0.5 1 1 62.503 62.52 3 4.2157E-05 19481 20230619_1882_Aki_TMTPro18x_K_F3 92.039 77.686 23093 22015 20834 27010 21982 31706 24019 28006 25231 26123 21742 29039 20663 22349 29299 23418 22099 29544 21358 20186 21416 26916 22860 31598 24148 28807 25515 26582 22496 29082 21561 23317 29214 23879 21266 27969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115900000 3398 572 3242 6232;6233 5146 5146 1 9606 Homo sapiens -0.01809722486609644 DAELAGSPELLEFLGTR Unmodified 1816.9207 0.92069363 2978 F6TR53;Q9H7U7;Q53T59 HS1BP3 HCLS1-binding protein 3 yes no 0 0 0 5.5 0.5 1 1 64.142 64.187 3 7.7635E-05 19842 20230619_1885_Aki_TMTPro18x_K_F5 92.439 74.337 42605 34977 37890 44574 40425 41850 44687 41868 45688 46547 45328 45555 54988 43684 48715 52341 49975 55407 39360 32101 38958 44184 41885 42536 44839 42917 46501 46762 46954 46237 55493 45605 49737 52619 47841 52574 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34191000 3399 2978 3243 6234;6235 5147 5147 1 9606 Homo sapiens 0.04491011252912358 DAEWTTVFK Unmodified 1095.5237 0.52367535 2756 C9JJX6;E9PDC3;O00192-2;O00192;B9EH95;Q8NAH4 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome yes no 0 0 0 6 0 1 59.497 59.559 2 0.00020455 17953 20230619_1886_Aki_TMTPro18x_K_F6 144.12 87.074 35670 30362 38699 42608 41312 50902 51008 50333 57887 51077 47415 51994 54082 45843 51069 57082 52315 70586 33015 27890 39140 42118 42998 50800 51064 51472 58162 51620 49473 52527 54846 48114 52092 57910 50169 66832 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20801000 3400 2756 3244 6236 5148 5148 1 9606 Homo sapiens -0.020265536563101705 DAFADAVQR Unmodified 991.47231 0.47230849 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 3 0.816 1 1 1 43.036 43.1 2 1.0906E-05 10962 20230619_1882_Aki_TMTPro18x_K_F3 171.73 48.014 680120 552930 610610 606910 602010 684300 597020 608970 1074600 813360 872980 825070 854990 741130 722170 913600 948240 941940 628330 506750 625830 609740 627210 684580 616940 632740 1058700 812260 903640 834470 867300 776400 750220 916310 905040 894380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 764920000 3401 3197 3245 6237;6238;6239 5149;5150 5149 2 9606 Homo sapiens -0.023768776303313643 DAFALAK Unmodified 734.39629 0.39629 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PM69;E9PKD5;E9PMD8;E9PN50 PSMC3 26S protease regulatory subunit 6A yes no 0 0 0 6.5 0.5 1 1 50.977 51.055 2 0.016136 14038 20230619_1887_Aki_TMTPro18x_K_F7 110.35 24.261 665060 523780 500130 588970 742500 834170 716810 692260 1013600 516520 558420 446920 489530 413730 597110 597730 592960 454590 613550 480200 526030 592560 752460 821640 732660 712200 996000 530530 590750 456610 507180 437450 605030 589740 566430 433790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 396810000 3402 4761 3246 6240;6241 5151 5151 1 9606 Homo sapiens 0.018467702601810743 DAFLGSFLYEYSR Unmodified 1566.7355 0.73545904 2776 CON__P02769 yes yes 0 0 0 8 0 1 64.117 64.138 2 6.031099999999999E-21 19593 20230619_1888_Aki_TMTPro18x_K_F8 272.15 234.6 + 27950 66250 93287 27191 286410 361300 122360 108330 466620 60197 41906 81481 34566 63186 81698 53482 75626 164750 26650 60226 91885 34992 278790 334090 142940 126580 437780 65320 62854 80977 38231 65303 81785 60161 73034 154970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228210000 3403 2776 3247 6242 5152 5152 1 9606 Homo sapiens -0.025239267559754808 DAFPEAIIVKPSDIFGR Unmodified 1873.9938 0.993799 1508 Q9BTT5;A0A3B3ISG8;Q16795;A8K4V2 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 1 8 0 1 62.831 62.857 3 0.027274 19028 20230619_1888_Aki_TMTPro18x_K_F8 51.495 37.337 47721 35605 49761 56430 46105 55047 54561 48873 56568 58360 59033 48543 61025 46575 48143 46298 47978 42493 44118 32772 50371 55219 48423 55594 54587 50638 57629 58181 60456 49663 61555 48125 49159 46337 45869 40421 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16282000 3404 1508 3248 6243 5153 5153 1 9606 Homo sapiens 0.09176184766192819 DAFPVAGQK Unmodified 931.47633 0.47633123 3653;450 A8K1J3;A0A024R7G8;P54725-3;P54725;A0A494C0B4;P54725-2;K7ENJ0;K7ELW1;P54727;B4DEA3;Q53F10;B7Z4W4;B7ZA74;Q5W0S5;Q5W0S4 RAD23A;RAD23B UV excision repair protein RAD23 homolog A;UV excision repair protein RAD23 homolog B no no 0 0 0 6 0.816 2 2 2 46.314 46.396 2;3 0.00092626 12281 20230619_1886_Aki_TMTPro18x_K_F6 98.582 52.864 360200 307210 355060 373910 403880 429980 406030 396320 570280 442790 484070 475840 499050 405030 443980 503060 502750 464430 333120 281780 361940 372870 415880 429840 414240 408480 567850 446350 501220 479280 506200 425320 455990 501660 480200 441660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1658899999.9999998 3405 450;3653 3249 6244;6245;6246;6247;6248;6249 5154;5155 5154 2 9606 Homo sapiens 0.007852118633763894 DAFQNAYLELGGLGER Unmodified 1751.8479 0.84786304 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 4.5 0.5 1 1 62.632 62.658 3 9.7407E-06 19144 20230619_1885_Aki_TMTPro18x_K_F5 103.5 81.286 36315 24772 34826 37836 36693 50829 43071 44085 45642 36681 36425 29346 37443 33460 48887 49901 41354 44343 33533 22799 35566 37283 38218 50206 43134 45289 45961 37273 37837 30338 38739 35243 49103 49564 39661 42165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177510000 3406 3387 3250 6250;6251 5156 5156 1 9606 Homo sapiens 0.002013022501841988 DAFVAIVQSVK Unmodified 1175.655 0.65502388 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 0 2.2 0.748 1 2 2 62.798 62.814 2;3 8.6709E-05 19586 20230619_1882_Aki_TMTPro18x_K_F3 120.96 74.254 141600 124150 141940 151780 151960 152570 153700 150560 166540 178440 168800 158870 169700 164160 192700 189850 189690 203090 131000 113870 144350 151030 156960 154240 155310 154710 169150 178250 173140 162390 174400 170490 195370 191130 181620 192710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1332600000 3407 1062;1064 3251 6252;6253;6254;6255;6256 5157;5158 5158 2 9606 Homo sapiens 0.07422256711606678 DAFVYAIK Unmodified 925.49092 0.49091866 10 Q96JZ5;A0A024QYS2;Q9HD45;Q8WUB5;Q5TB53 SMBP;TM9SF3 Transmembrane 9 superfamily member 3 yes no 0 0 0 8 0 1 57.016 57.068 2 0.0021653 16584 20230619_1888_Aki_TMTPro18x_K_F8 141.78 82.577 154140 131280 142070 148620 152500 167170 171980 169680 211220 183850 179130 160360 172010 145700 192510 166720 165530 159730 142480 120330 145530 148970 158170 167730 173450 173520 211610 184390 184910 163380 176730 151910 193760 166920 158600 151810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 347670000 3408 10 3252 6257 5159 5159 1 9606 Homo sapiens 0.025192840115209947 DAGAGLLAAAMIAVVPGYISR Unmodified 2015.0874 0.087381804 247 A0A024R3J7;P46977;P46977-2 hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 0 0 5.5 0.5 1 1 66.939 66.982 3 9.089E-17 20954 20230619_1885_Aki_TMTPro18x_K_F5 163.62 146.74 6479.3 5943.2 6788.6 6544.5 7828.3 5732.6 7451.6 6690.7 8850.9 6437.8 9248 7630.9 7929.2 5618.1 6464.2 8861.6 8099.3 9934.8 5998.1 5444.7 6880.7 6554.4 8016.2 5891.2 7578 6766.9 8940.6 6558.7 9397.9 7637.3 8058.1 6039.5 6703.7 8903.5 7746.3 9418 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 66727000 3409 247 3253 6258;6259 5160;5161 5160 2 9606 Homo sapiens 0.12044160876985188 DAGEGGLSLAIEGPSK Unmodified 1499.7468 0.74675201 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4;Q6NXF2;Q96C61;B4DTD5 FLNA;FLJ00119 Filamin-A yes no 0 0 0 3.5 0.5 1 1 55.619 55.627 3 1.4144E-14 16501 20230619_1883_Aki_TMTPro18x_K_F4 179.56 165.65 47539 39969 51336 48968 55427 62048 55424 64591 68135 57842 66575 77704 59108 63093 63958 64257 67970 77890 43994 36664 51881 48903 57262 61800 56308 65596 68589 59424 68139 77450 60886 65570 65179 65324 65064 73800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251740000 3410 3484 3254 6260;6261 5162;5163 5163 2 9606 Homo sapiens 0.016868505474576523 DAGHPLYPFNDPY Unmodified 1504.6623 0.6622941 3450 V9HWI0;P14550 HEL-S-165mP;AKR1A1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 3.5 0.5 1 1 56.967 56.987 2 0.091531 17060 20230619_1883_Aki_TMTPro18x_K_F4 54.066 50.049 66705 57862 67010 61982 50889 62877 66098 66992 75270 75381 81854 83591 74999 69978 82951 79996 79424 87552 61706 53005 67780 62322 54601 63618 66087 68382 76407 75970 83407 84016 77172 73142 84004 80666 76083 83047 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 223550000 3411 3450 3255 6262;6263 5164 5164 1 9606 Homo sapiens -0.06985055478617141 DAGIEPGPDTYLALLNAYAEK Unmodified 2220.095 0.095029182 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 4.67 1.49 2 1 1 1 1 65.401 65.438 3;4 8.8501E-14 20573 20230619_1883_Aki_TMTPro18x_K_F4 149.36 136.68 99988 82160 119740 121870 96310 111430 109170 122230 131720 134230 135560 144470 141830 117840 130520 144750 147030 159500 92610 75532 119640 119660 102250 113670 110130 124440 133100 135290 139230 145260 144010 123890 133920 145800 140600 151290 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 223220000 3412 1723 3256 6264;6265;6266;6267;6268;6269 5165;5166;5167;5168;5169 5167 5 9606 Homo sapiens 0.03378546887734046 DAGLAVR Unmodified 700.38679 0.38678794 3534 V9HWH7;P31939;B2R7P8;P31939-2;F8WEF0 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes no 0 0 0 3 0.816 1 1 1 35.973 36.026 2 0.076151 7924 20230619_1882_Aki_TMTPro18x_K_F3 74.415 28.045 145190 80895 160530 155890 192550 205710 161780 175360 194120 160340 220680 226290 203600 182210 203370 105900 250530 223640 134110 74768 162220 151790 196590 203410 166010 180820 196830 164920 224460 225030 208400 185480 208830 114580 239070 211260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146990000 3413 3534 3257 6270;6271;6272 5170 5170 1 9606 Homo sapiens 0.024610019746660328 DAGLHCLELGHTGEAGPHAMVR Unmodified 2327.0899 0.089917775 2124 A8K9T9;A8K8N7;O15067;B4DJ26;H0YGH1;Q9BR56;Q6P4B4 PFAS Phosphoribosylformylglycinamidine synthase yes no 0 0 0 5 0 1 41.311 41.396 5 5.3037E-68 10107 20230619_1885_Aki_TMTPro18x_K_F5 249.52 234.91 82484 59849 66106 67313 75615 84277 70053 76428 170310 81930 84856 75281 85232 74474 80358 102800 104330 86712 76091 54888 68655 67608 77912 83767 73973 78730 164120 82543 90986 76790 86839 78320 83240 101880 99468 82595 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95512000 3414 2124 3258 6273 5171 5171 1 9606 Homo sapiens -0.02054358727627914 DAGMQLQGYR Oxidation (M) 1153.5186 0.51860675 415 B3KUZ8;A0A024R6W0;P00505;A8K482;P00505-2 GOT2 Aspartate aminotransferase;Aspartate aminotransferase, mitochondrial yes no 0 1 0 4.5 0.5 1 1 37.501 37.545 2 0.0052683 8558 20230619_1883_Aki_TMTPro18x_K_F4 85.862 76.949 67144 60941 65345 77022 76581 72562 76192 84468 176680 68973 72796 74475 79506 69673 77273 73596 82004 74241 62115 55905 66754 76406 78767 74013 79847 85047 169790 70949 79845 75205 80898 72224 78850 73956 78362 70536 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91330000 3415 415 3259 6274;6275 5172;5173 5172 262 2 9606 Homo sapiens -0.05201180790550097 DAGQISGLNVLR Unmodified 1241.6728 0.67279921 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 5.33 3.09 1 1 1 52.194 52.244 2 1.4284E-23 14559 20230619_1887_Aki_TMTPro18x_K_F7 247.96 189.04 695810 589820 671100 676150 648640 729690 729220 726720 842410 861160 822800 825740 918210 786490 877770 892580 856110 859490 643350 540690 683490 676720 677950 733870 734230 746160 851430 862070 849440 838480 932140 818190 892170 893480 819350 816680 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4547900000 3416 1488 3260 6276;6277;6278 5174;5175;5176 5175 3 9606 Homo sapiens 0.061629719664551885 DAGSGPPATEGSMDTLENVQLK Oxidation (M) 2232.0216 0.021606243 4192 Q86VY4 TSPYL5 Testis-specific Y-encoded-like protein 5 yes yes 0 1 0 3 0 1 52.316 52.382 3 1.0207E-08 15219 20230619_1882_Aki_TMTPro18x_K_F3 113.86 104.07 20467 18067 20578 22515 21603 20275 27267 22934 26150 24191 22559 24719 28352 19904 21887 27386 27423 26634 18935 16573 20922 22346 22470 20744 27115 23297 26566 24395 23582 24905 28423 21105 22704 27340 26179 25308 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37325000 3417 4192 3261 6279 5177 5177 2701 1 9606 Homo sapiens -0.04512369617123113 DAGTIAGLNVLR Unmodified 1198.667 0.66698555 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;P11142-2;Q53HF2;B4E1Q1;E9PN89;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PI65;A4D111;E9PK54 HSPA8;HEL-S-72p;LOC401308 Heat shock cognate 71 kDa protein no no 0 0 0 7.5 0.5 2 2 55.189 55.253 2;3 6.8214E-18 15850 20230619_1887_Aki_TMTPro18x_K_F7 192.3 159.18 220870 191030 212650 229950 188680 247290 226390 224580 267640 235890 230530 218820 240890 199750 227570 278830 238240 231110 204240 175190 216490 229260 199270 248150 227380 231330 268780 237370 238660 222430 244890 210830 232520 276110 227790 220050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 22367000000 3418 3430;2926 3262 6280;6281;6282;6283 5178;5179;5180 5178 3 9606 Homo sapiens 0.0755987345480662 DAGTIAGLNVMR Oxidation (M) 1232.6183 0.6183208 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 1 0 6.5 0.5 2 2 46.435 46.521 2;3 1.0972E-05 11951 20230619_1887_Aki_TMTPro18x_K_F7 130.56 113.62 191760 163620 173200 200260 231590 220210 227570 222610 251110 224040 242100 215970 222650 204710 235610 264880 240910 260490 177220 150080 178500 199490 235590 221320 230360 227290 254070 226160 247850 219440 228590 214660 239830 264870 230590 247390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1258900000 3419 3429 3263 6284;6285;6286;6287 5181;5182 5182 2050 2 9606 Homo sapiens 0.011316368233792673 DAGTIAGLNVMR Unmodified 1216.6234 0.62340617 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 7.5 0.5 1 1 52.282 52.357 3 4.2912E-13 14651 20230619_1887_Aki_TMTPro18x_K_F7 158.56 139.82 32511 27321 29139 30805 29080 32463 34513 35161 36379 43641 40558 46591 45453 36436 41921 47947 42704 47051 30041 25042 29893 30859 30363 32771 34550 35956 37166 43715 41676 46796 46048 38535 42769 47930 40881 44683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 536910000 3420 3429 3263 6288;6289 5183 5183 1 9606 Homo sapiens 0.023759406860108356 DAGYGGLSLSIEGPSK Unmodified 1549.7624 0.76240208 3484 P21333;P21333-2;Q60FE5;Q60FE6;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5C6 FLNA;FLJ00119 Filamin-A yes no 0 0 0 6 0 1 57.942 58.011 2 4.1565E-06 17289 20230619_1886_Aki_TMTPro18x_K_F6 149.38 113.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3421 3484 3264 6290 5184 5184 1 9606 Homo sapiens 0.009511370645213901 DAHALIYK Unmodified 929.49707 0.49706667 4631 Q9NYK5-2;Q9NYK5;C9JG87 MRPL39 39S ribosomal protein L39, mitochondrial yes no 0 0 0 7.5 0.5 1 1 43.164 43.209 3 0.00064136 10564 20230619_1887_Aki_TMTPro18x_K_F7 119.27 76.028 160970 27468 110570 161410 177640 105410 168270 180610 245570 175560 191840 187050 202620 173470 112720 224330 153580 196490 147730 26513 117730 150990 178500 112520 172480 179190 243450 178130 199610 189050 202230 182010 119110 222720 146850 186770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129980000 3422 4631 3265 6291;6292 5185 5185 1 9606 Homo sapiens 0.029498022430516357 DAHLLVESK Unmodified 1010.5397 0.53965977 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 3.5 0.5 1 1 43.385 43.442 3 0.0019666 11064 20230619_1883_Aki_TMTPro18x_K_F4 81.338 54.74 83796 43984 74732 81626 99312 65329 90603 97512 131330 103110 117550 136330 108760 83269 94064 107640 115240 118540 77241 40643 77024 79106 100720 68098 93106 97547 130850 104900 120960 135010 110540 88958 97154 108340 110080 112460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 558250000 3423 1723 3266 6293;6294 5186 5186 1 9606 Homo sapiens 0.03481152580627622 DAHNALLDIQSSGR Unmodified 1495.7379 0.73791866 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 4.5 0.5 1 1 43.456 43.519 3 3.2704E-17 10983 20230619_1885_Aki_TMTPro18x_K_F5 215.96 200.82 143440 54119 115110 130860 151440 103750 141990 149640 199720 161520 179990 151150 170980 143940 119590 156850 159240 165400 131970 50349 119850 125390 153840 108060 145470 150000 199290 162340 184900 153770 172370 149450 124910 157790 152020 156990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 704990000 3424 12 3267 6295;6296 5187;5188 5188 2 9606 Homo sapiens 0.009879217016532493 DAHSNLLAK Unmodified 967.50869 0.50869399 3296 O75323;O75323-2;F8WBI5 GBAS Protein NipSnap homolog 2 yes no 0 0 0 6.5 0.5 1 1 39.347 39.423 3 0.00023748 9033 20230619_1887_Aki_TMTPro18x_K_F7 121.5 81.457 62855 20348 49414 65672 79688 51011 72594 69334 103880 71070 83045 94185 82811 73041 58143 77375 75495 89805 57798 19079 51827 62312 79980 53126 74510 69653 103120 72479 86200 93803 83388 76257 60628 78329 72164 85113 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199400000 3425 3296 3268 6297;6298 5189 5189 1 9606 Homo sapiens 0.023639992663902376 DAHSQGEVVSCLEK Unmodified 1557.7093 0.70932065 4310 Q92896;Q92896-3;Q92896-2;H3BM42;H3BQT1 GLG1 Golgi apparatus protein 1 yes no 0 0 0 2.5 0.5 1 1 42.443 42.515 3 0.00033547 10720 20230619_1882_Aki_TMTPro18x_K_F3 92.265 71.884 34687 19446 52256 45719 77798 41494 70560 51349 48309 57283 65515 41847 46473 34360 134490 40550 42468 43614 32146 18034 51925 43939 78116 42584 70844 51983 51197 57065 65609 42983 52071 36066 129610 41123 41531 41388 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82350000 3426 4310 3269 6299;6300 5190 5190 1 9606 Homo sapiens -0.047225639897988 DAIAQAVR Unmodified 842.46102 0.46101552 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8;B4DVU1 HEL107;TKT Transketolase yes no 0 0 0 4.5 0.5 1 1 38.834 38.9 2 0.00089172 9062 20230619_1885_Aki_TMTPro18x_K_F5 153.73 93.368 209400 118300 147690 188950 180580 297510 166510 187250 792370 216310 226380 249550 226090 220840 216400 260900 283290 252040 192780 109040 156000 186160 186970 289680 187350 199600 747140 219660 258710 250830 230900 230690 224140 260930 270190 239600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 327610000 3427 3523 3270 6301;6302 5191;5192 5192 2 9606 Homo sapiens 0.03348345066183356 DAIEELVK Unmodified 915.49131 0.49131259 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2;Q05D78 MRE11A Double-strand break repair protein MRE11A yes no 0 0 0 3 0 1 55.802 55.843 3 0.0045476 16707 20230619_1882_Aki_TMTPro18x_K_F3 95.741 44.682 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3428 229 3271 6303 5193 5193 1 9606 Homo sapiens 0.030186589407207975 DAIHFYNK Unmodified 1006.4872 0.48723027 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 7.5 0.5 1 1 44.643 44.693 3 0.00025214 11216 20230619_1887_Aki_TMTPro18x_K_F7 153.71 93.029 1581200 1277800 1405700 1542500 1557000 1550400 1608500 1453400 2228600 987870 976060 728350 867090 680340 1267400 1012500 1042500 730120 1460700 1172100 1445400 1536100 1606900 1565500 1636700 1480000 2181300 1018200 1054700 751200 907580 721010 1267800 997210 997440 697610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1567099999.9999998 3429 2088 3272 6304;6305 5194;5195 5194 2 9606 Homo sapiens -0.01575385762339465 DAINQGMDEELERDEK Unmodified 1890.8265 0.82653525 1402 A0A384MDR8;P11177-3;P11177-2;P11177;C9J634;F8WF02 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes no 0 0 1 1 0 1 47.675 47.675 3 1.6634E-33 13392 20230619_1880_Aki_TMTPro18x_K_F1 244.1 227.03 215170 192420 217540 243840 204030 253440 278580 263090 301440 287910 274300 273960 307300 269370 290090 341950 294890 312450 199090 176530 220830 242140 215180 255680 277200 268800 304730 289270 284200 278720 311840 281790 295850 340670 282230 297020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 247440000 3430 1402 3273 6306 5196 5196 1 9606 Homo sapiens -0.08324495631495665 DAIPENLPPLTADFAEDK Unmodified 1954.9524 0.95238769 2776 CON__P02769 yes yes 0 0 0 3.5 1.71 1 1 1 1 1 1 62.736 62.76 3 1.796E-06 19493 20230619_1883_Aki_TMTPro18x_K_F4 102.57 91.981 + 256970 469930 529380 253350 1234500 1684900 746510 732910 1263600 492290 460880 611550 387840 427020 463060 522800 631170 991220 241530 427810 524550 292570 1216300 1572600 795820 806610 1224200 516610 508450 608770 403110 451960 479280 549560 604770 935180 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1940299999.9999998 3431 2776 3274 6307;6308;6309;6310;6311;6312 5197;5198;5199;5200;5201 5200 5 9606 Homo sapiens 0.013109592162209083 DAIQVVR Unmodified 799.4552 0.45520186 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;B3KMI9;Q96K98;Q96K97;Q9UHB9-3 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 0 4.5 0.5 1 1 39.545 39.611 2 0.077126 9334 20230619_1885_Aki_TMTPro18x_K_F5 73.975 24.325 190700 131920 171680 204080 242030 253000 232180 215150 284560 233830 263000 267070 244360 212860 248000 240720 298470 254310 176020 121420 177240 200640 245570 251200 236170 222960 285910 236450 270090 267740 250270 222800 254840 242270 284780 241570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 269840000 3432 4661 3275 6313;6314 5202 5202 1 9606 Homo sapiens 0.04745246554523419 DAISGIGTDEK Unmodified 1104.5299 0.52988294 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;E5RJF5;E5RK63;A0A0S2Z301;E5RI05;A0A0S2Z377 ANXA6 Annexin A6;Annexin no no 0 0 0 3 0.816 1 1 1 46.439 46.506 2 7.3034E-10 12550 20230619_1882_Aki_TMTPro18x_K_F3 193.52 81.915 510760 442280 454210 542410 667580 665940 572350 542170 819690 670170 849490 766060 681090 674540 659500 807020 895890 824500 472030 405670 469750 540960 674030 661440 590040 565970 821490 673910 862060 770750 700360 705350 684860 809420 854400 783190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 464390000 3433 1062;1064 3276 6315;6316;6317 5203;5204 5204 2 9606 Homo sapiens -0.018200802154069606 DAITQALFLR Unmodified 1146.6397 0.63970816 4064 Q5TDG3;Q9UNX4 WDR3 WD repeat-containing protein 3 yes no 0 0 0 1.5 0.5 1 1 61.632 61.637 2 0.01029 19342 20230619_1881_Aki_TMTPro18x_K_F2 85.622 61.501 74260 60054 77553 85653 73849 86450 78655 85881 112700 80191 67653 60866 76792 59877 80465 90036 79835 70202 68687 55186 78501 84380 77221 87307 80082 87607 111030 80835 71902 62702 78250 63408 81772 88855 76325 66924 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88210000 3434 4064 3277 6318;6319 5205 5205 1 9606 Homo sapiens 0.07225389914378866 DALEPGQR Unmodified 884.43519 0.4351947 3401 P07741;H3BQZ9;P07741-2;H3BQB1 APRT Adenine phosphoribosyltransferase yes no 0 0 0 1.5 0.5 1 1 33.988 34.016 2 0.00056536 7577 20230619_1880_Aki_TMTPro18x_K_F1 161.12 127.02 352500 214230 360180 366770 527880 535740 398750 449870 611070 454400 637590 599560 522910 454940 501180 287650 635910 569270 325480 197570 367700 359780 531620 526790 416210 465410 610820 463740 647480 596760 536410 465530 516190 308280 606670 537950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 435470000 3435 3401 3278 6320;6321 5206;5207 5206 2 9606 Homo sapiens -0.011645491760873483 DALFASQEK Unmodified 1007.4924 0.49237523 1090 Q5QNY5;A0A0S2Z497;P40855;E9PS71;B7Z8B3 PEX19 Peroxisomal biogenesis factor 19 yes no 0 0 0 4 0 1 48.584 48.622 3 0.089078 13374 20230619_1883_Aki_TMTPro18x_K_F4 37.73 21.527 156910 137520 148890 159640 148470 83565 166850 169330 97621 73764 88304 87783 83519 74231 91329 96022 84175 85710 145090 126060 151870 158550 153910 92489 165110 164620 102930 79957 90920 88161 85780 78124 92368 95561 80618 81511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40130000 3436 1090 3279 6322 5208 5208 1 9606 Homo sapiens -0.011071266903741162 DALGAQNASGER Unmodified 1187.5531 0.553078 1793 Q96I59;A0A8Q3SHT5;B3KPX5;A0A8Q3SHL5;A0A8Q3SIK4;A0A8Q3WKF4;A0A8Q3WKE5;A0A8Q3WKI6;A0A8Q3SHT7;A0A8Q3WLI0;A0A8Q3SHU1;E9PRK2;A0A8Q3SHS9;A0A8Q3SHP1;A0A8Q3WKD9;A0A8Q3SHV4;A0A8Q3WLT2;A0A8Q3SHN4;A0A8Q3WKD4 NARS2 Probable asparagine--tRNA ligase, mitochondrial yes no 0 0 0 2 0 1 33.297 33.355 2 4.8625E-13 7002 20230619_1881_Aki_TMTPro18x_K_F2 211.63 189.95 32866 20015 45410 46198 66975 75319 50021 62198 60560 40812 70931 79085 58671 57909 67340 28840 79449 76439 30438 18547 45415 44822 67400 73581 51788 63838 61409 43579 71820 77759 60737 58905 68769 32245 75879 72109 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40205000 3437 1793 3280 6323 5209 5209 1 9606 Homo sapiens -0.03319641378107008 DALLDQIR Unmodified 942.51345 0.51344502 1930 A4D0Y1;A8K180;O00401 WASL Neural Wiskott-Aldrich syndrome protein yes no 0 0 0 4 0 1 50.708 50.739 2 0.0092635 14318 20230619_1883_Aki_TMTPro18x_K_F4 95.815 29.386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3438 1930 3281 6324 5210 5210 1 9606 Homo sapiens 0.039888834091470926 DALLVGVPAGSNPFREPR Unmodified 1894.0061 0.006095016 127 D3DQV2;A0A024R156;Q9H1X3-3;A0A024R161;P50151 hCG_1992840;hCG_1994888;GNG10 Guanine nucleotide-binding protein subunit gamma;Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-10 yes no 0 0 1 2 0 1 55.535 55.555 3 1.4424E-09 16812 20230619_1881_Aki_TMTPro18x_K_F2 135.09 116.49 100440 95178 101660 129330 94590 103720 117640 118780 129510 108370 110630 114170 116860 98520 94562 124370 107340 117070 92978 87367 103240 127430 99413 107160 117650 120090 130450 110270 114680 115140 118020 103500 97426 124070 102650 111240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67860000 3439 127 3282 6325 5211;5212 5212 2 9606 Homo sapiens 0.09485221229260787 DALNIETAIK Unmodified 1086.5921 0.59208927 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;A6NMY6;H0YMU9;B4DNH8;H0YNB8;H0YKS4;A0A7I2V4P4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YMD9;H0YKN4 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 5.25 0.829 1 1 2 55.462 55.519 2;3 2.1514E-09 16468 20230619_1883_Aki_TMTPro18x_K_F4 200.71 139.73 2597900 1834200 2064400 2508500 2438900 3281900 2657300 2524900 3467200 3347100 3619700 4053200 3449300 3336300 3077500 3495100 3412500 4277400 2396100 1685600 2150700 2486200 2517000 3240600 2690900 2654100 3491900 3361300 3701500 4055700 3510800 3472400 3157100 3552400 3267800 4051300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 547800000 3440 368 3283 6326;6327;6328;6329 5213;5214;5215 5213 3 9606 Homo sapiens 0.0522569092354388 DALNLAQMQEQTLQLEQQSK Unmodified 2315.1427 0.14272443 4603 Q9NVI7-2;Q9NVI7;Q96T67;H0Y2W2;Q5T2N8;J3QSF3 ATAD3A;ATAD3C ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3C yes no 0 0 0 5.5 0.5 1 1 62.208 62.258 3 6.6402E-05 19129 20230619_1886_Aki_TMTPro18x_K_F6 82.8 60.997 28068 22793 27677 33445 29496 33866 34226 37061 35905 32667 34843 36907 39085 34916 36821 41416 38147 48838 25949 20952 28215 32892 30626 34269 34294 37520 36436 33378 36006 37222 39660 36430 37584 41913 36560 46269 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 496260000 3441 4603 3284 6330;6331 5216 5216 1 9606 Homo sapiens 0.037758778161332884 DALQGFK Unmodified 777.4021 0.40210366 2252;3412 B2R802;P09012;M0R268;B4DDC7;P08579;B5BTZ8 SNRPA;SNRPB2 U1 small nuclear ribonucleoprotein A;U2 small nuclear ribonucleoprotein B'' no no 0 0 0 6.8 0.748 2 2 1 49.404 49.483 2;3 0.013971 13322 20230619_1887_Aki_TMTPro18x_K_F7 86.472 41.751 320340 253620 273480 314470 322990 374530 345010 342760 458380 354470 389050 373950 386240 314220 344370 411300 394650 368880 295790 232730 282740 313310 332610 373380 349970 352660 457440 358450 402130 376900 392270 331210 354050 409210 376930 350910 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1748099999.9999998 3442 2252;3412 3285 6332;6333;6334;6335;6336 5217;5218;5219 5218 3 9606 Homo sapiens 0.004498687718523797 DALSSVQESQVAQQAR Unmodified 1715.8438 0.84384029 1926 B0YIW2;A3KPE2;P02656 APOC3 Apolipoprotein C-III yes no 0 0 0 4 0 1 44.383 44.427 3 1.0278999999999999E-52 11443 20230619_1883_Aki_TMTPro18x_K_F4 300.51 283.01 29587 29477 41041 31134 44301 41769 37387 36920 45903 71401 103990 117940 59101 57566 84700 73899 76535 111960 27483 26987 40714 31479 45497 41361 38425 38983 48599 71629 102100 115460 62966 62217 85189 76151 73553 105810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197240000 3443 1926 3286 6337 5220 5220 1 9606 Homo sapiens 0.014552127564911643 DALTAEK Unmodified 746.38103 0.38103386 552 Q6NVY0;A0A024R904;Q9HB71;B4DFD3;Q9HB71-2;B2ZWH1 CACYBP Calcyclin-binding protein yes no 0 0 0 3 0.816 1 1 1 41.219 41.278 2 0.013624 10384 20230619_1881_Aki_TMTPro18x_K_F2 101.33 42.723 118260 68041 159940 179120 216820 254690 172630 195820 199860 115410 183010 163410 133640 137410 167560 78034 195770 178830 109470 63236 159990 172440 219570 250150 177540 201910 201030 122590 186320 162850 139770 139490 170830 85315 186920 168850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103400000 3444 552 3287 6338;6339;6340 5221;5222;5223 5221 3 9606 Homo sapiens -0.0023014132766547846 DAMENEMR Oxidation (M) 1010.3797 0.37973001 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 1 0 1 0 1 29.71 29.71 2 0.032716 5885 20230619_1880_Aki_TMTPro18x_K_F1 72.038 52.561 14020 7342.5 11335 13988 14855 19467 15014 15452 24755 15846 17295 16712 18029 15340 16931 18363 21305 19126 12914 6787.6 11811 13632 15207 19155 15419 16069 24340 16046 18121 16888 18334 16030 17484 18444 20327 18166 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8797100 3445 3954 3288 6341 5224 5224 2622 1 9606 Homo sapiens -0.12504466750363008 DAMEQCHNYNAR Unmodified 1507.5932 0.59324503 327 A0A994J414;A0A024R582;J3KMZ8;A0A994J6A8;Q92785;A0A994J426;Q92785-2;E9PN04 DPF2 Zinc finger protein ubi-d4 yes no 0 0 0 2.5 0.5 1 1 30.735 30.811 3 2.7971E-24 6031 20230619_1881_Aki_TMTPro18x_K_F2 253.88 241 26033 22803 27605 27964 38529 35866 33832 33002 44609 37922 36722 39502 38477 34515 30915 40316 42331 42089 24095 20915 28071 27922 38989 35622 34705 34038 44521 38129 38132 39849 38883 36069 32251 40493 40390 39959 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44252000 3446 327 3289 6342;6343 5225;5226 5225 2 9606 Homo sapiens -0.14024786041477455 DAMPSDANLNSINK Unmodified 1488.6879 0.68785692 1092 A0A0S2Z4B5;Q08209;A0A0S2Z4C6;Q08209-2;Q08209-3;E7ETC2;Q08209-5;Q9UMM5;Q08209-4 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase yes no 0 0 0 5 0 1 49.878 49.955 3 9.3027E-07 13732 20230619_1885_Aki_TMTPro18x_K_F5 107.14 89.634 59260 50042 58344 54135 47361 62087 60979 51461 68808 74972 74817 57026 78327 69177 74246 80456 79356 74541 54800 45850 59167 54466 50512 61938 60938 53951 69922 73997 76518 59190 79653 71558 75884 80326 75844 70879 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71802000 3447 1092 3290 6344 5227 5227 1 9606 Homo sapiens -0.03693949018497733 DAMQYASESK Oxidation (M) 1144.4707 0.47065351 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;J3KS13;A0A8V8TQK7 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 3 0 1 38.522 38.575 2 0.0041803 8945 20230619_1882_Aki_TMTPro18x_K_F3 89.171 75.014 33643 23710 28153 30781 33151 34230 34830 36230 50468 41089 47325 56701 52663 44483 35212 58047 61572 59354 31040 21778 29144 30550 34107 34401 35498 37004 50372 41754 48969 56432 52779 46994 37692 58115 58642 56369 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25887000 3448 826 3291 6345 5228 5228 487 1 9606 Homo sapiens -0.09580299501271838 DAMQYASESK Unmodified 1128.4757 0.47573888 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;J3KS13;A0A8V8TQK7 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 3.5 0.5 1 1 44.22 44.279 3 8.1739E-06 11378 20230619_1883_Aki_TMTPro18x_K_F4 136.02 102.64 281020 227050 235880 269910 242500 297530 287640 266650 386180 360330 347960 362150 436760 335410 281840 457160 484420 438660 259480 208250 243730 269400 253090 298040 290340 277110 386380 359360 362560 366760 435590 353470 301430 455850 461220 417000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 359670000 3449 826 3291 6346;6347 5229 5229 1 9606 Homo sapiens -0.08335995638663007 DANCSVMR Unmodified 951.39024 0.39023512 434 E9PFH4;B2R6H7;A0A024R794;Q9Y5L0-3;Q9Y5L0;B3KMX1;B3KM69;C9J7E5;Q9Y5L0-5;Q9Y5L0-1 TNPO3 Transportin-3 yes no 0 0 0 3 0 1 32.316 32.394 2 0.073714 6522 20230619_1882_Aki_TMTPro18x_K_F3 60.973 47.92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3450 434 3292 6348 5230 5230 1 9606 Homo sapiens -0.08740439305279324 DANDPVDDR Unmodified 1015.4207 0.42066685 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 0 1 0 1 32.432 32.432 2 0.00018567 6958 20230619_1880_Aki_TMTPro18x_K_F1 144.79 121.27 28537 13991 31565 31740 45676 56565 39029 49390 52671 29565 48469 56227 40068 41178 43028 22815 50958 52505 26345 12977 32036 30881 46214 55082 40175 50379 52611 31785 49613 55311 41355 41994 44023 24956 48690 49549 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22805000 3451 3337 3293 6349 5231 5231 1 9606 Homo sapiens -0.08642666114894837 DANGNSFATR Unmodified 1051.4683 0.46828574 2202 Q96IR1;B2R491;P62701;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 0 0 0 3 0.816 1 1 1 33.089 33.151 2 4.5939E-06 6765 20230619_1883_Aki_TMTPro18x_K_F4 168.46 144.31 103990 57388 129970 127280 178570 228540 132960 164780 185710 123020 180340 197110 173560 160670 172340 82603 199180 189010 96160 53169 130610 123930 180700 221690 138440 171500 185750 128970 185100 195310 177390 162870 176230 90542 190240 178440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118420000 3452 2202 3294 6350;6351;6352 5232;5233 5233 2 9606 Homo sapiens -0.055389671240618554 DANLYISGLPR Unmodified 1217.6404 0.64043645 3938 Q15717;Q15717-2;M0QZR9;M0R055 ELAVL1 ELAV-like protein 1 yes no 0 0 0 7.5 0.5 1 1 53.872 53.941 2 5.3039E-06 15193 20230619_1888_Aki_TMTPro18x_K_F8 158.05 121.03 317940 267030 295200 319400 285970 331110 322840 346570 376650 372600 356600 352320 409540 325440 337480 431310 393680 408040 293860 244890 301790 318470 298990 334280 325150 353600 380010 374530 369060 357830 412780 342300 348060 430130 376230 387760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 813950000 3453 3938 3295 6353;6354 5234;5235 5235 2 9606 Homo sapiens 0.04032184563448027 DANLYVSGLPK Unmodified 1175.6186 0.61863837 1058;3893;945 Q96J71;Q14576;Q14576-2;P26378-4;A0A494C0F8;P26378;P26378-3;P26378-1;P26378-5;P26378-2;A0A494C147;B1APY9;A0A494C1D9;A0A0R4J2E6;B7Z5E0;A0A494C015;A0A494C173;A0A0A0MRX1;Q12926-2;Q12926;B1AM48 ELAVL3;ELAVL4;ELAVL2 ELAV-like protein;ELAV-like protein 3;ELAV-like protein 4;ELAV-like protein 2 no no 0 0 0 8 0 1 54.132 54.203 3 0.00010694 15338 20230619_1888_Aki_TMTPro18x_K_F8 109.72 85.378 219180 187620 210190 241100 188960 186690 204330 207520 224470 250610 245260 242590 269000 215300 241880 273660 250790 267440 202660 172180 214070 238370 198220 193480 205890 211820 228560 250640 251680 245740 272390 226150 247110 273630 239980 254020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1201700000 3454 3893;1058;945 3296 6355 5236 5236 1 9606 Homo sapiens 0.037853798148944406 DANNGNLQLR Unmodified 1113.5527 0.55268407 2662 B5BUB5;P05455;Q9UMH5 SSB Lupus La protein yes no 0 0 0 3.5 0.5 1 1 37.016 37.064 2 1.7035E-07 8331 20230619_1883_Aki_TMTPro18x_K_F4 191.85 151.75 99711 68535 94760 101860 126820 161900 121750 119440 176100 116830 142320 138200 146310 117120 129070 121850 158350 146490 92070 63053 97234 100830 129340 158060 124670 124860 174760 119040 147720 138630 148370 121820 133120 123790 151140 138920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125710000 3455 2662 3297 6356;6357 5237 5237 1 9606 Homo sapiens 0.00044983692714595236 DANPAEDVR Unmodified 985.44649 0.44648767 3965 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes yes 0 0 0 1 0 1 33.981 33.981 2 0.00048219 7546 20230619_1880_Aki_TMTPro18x_K_F1 134.25 88.935 21256 14548 26419 31284 41500 44717 34882 38115 46659 28244 37164 39789 37895 35616 38494 19101 47145 39042 19674 13457 26667 30349 41732 44012 35909 39118 46427 29466 38632 39691 38716 36013 39494 20647 44968 36900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28501000 3456 3965 3298 6358 5238 5238 1 9606 Homo sapiens -0.04681771872617446 DANSVTSSLR Unmodified 1048.5149 0.51490158 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;B5MCE7;Q75MG1;E9PFD4;E7EMS9 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 0 5 0.816 1 1 1 38.89 38.962 2 2.4194E-05 9087 20230619_1885_Aki_TMTPro18x_K_F5 171.5 113.91 209760 151640 201240 194400 229850 254510 245920 233250 341410 239130 246210 234380 240380 204980 241340 225300 286700 224240 193750 139250 205550 193610 237100 252280 249830 239880 338280 241460 256760 237160 245670 213500 247770 226110 273440 213220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 327810000 3457 607 3299 6359;6360;6361 5239;5240 5239 2 9606 Homo sapiens -0.007415272927573824 DAPELGYAK Unmodified 962.47091 0.4709115 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;B4DG89 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 0 4 0 1 46.596 46.639 3 0.0044218 12468 20230619_1883_Aki_TMTPro18x_K_F4 74.92 50.765 75116 61827 69227 90398 86249 99121 96812 90051 119230 95808 96431 99319 108890 91308 92003 131010 129150 127890 69415 56829 71217 88987 88594 99320 97630 92808 119230 96693 100560 100470 109990 96555 96116 130710 123210 121510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34091000 3458 534 3300 6362 5241 5241 1 9606 Homo sapiens -0.01182511719082413 DAPNLICTPHTAWYSEQASLEMR Oxidation (M) 2705.2214 0.22138546 3668 P56545;P56545-3;P56545-2 CTBP2 C-terminal-binding protein 2 yes no 0 1 0 6 0 1 54.749 54.826 3 0.024257 15945 20230619_1886_Aki_TMTPro18x_K_F6 52.898 49.707 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3459 3668 3301 6363 5242 5242 2369 1 9606 Homo sapiens -0.06301637940987348 DAPQDFHPDR Unmodified 1196.521 0.52104959 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 0 2 0.816 1 1 1 34.119 34.16 3 2.1761E-10 7595 20230619_1880_Aki_TMTPro18x_K_F1 205.52 176.35 159370 121210 143780 150100 224920 239570 199060 194440 288800 192180 222310 227450 199580 178010 210880 194300 221030 207650 147180 111240 148620 150340 226640 234430 204830 201640 286160 195650 230270 227580 205040 186070 214700 195820 211290 197130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 721010000 3460 3484 3302 6364;6365;6366 5243;5244;5245 5243 3 9606 Homo sapiens -0.0693500906124882 DAPSPVDAAFR Unmodified 1144.5513 0.55128709 2800 CON__Q3SZV7 yes yes 0 0 0 4 0 1 47.008 47.05 2 2.9822E-05 12631 20230619_1883_Aki_TMTPro18x_K_F4 150.27 111.3 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3461 2800 3303 6367 5246 5246 1 -0.015206503960371265 DAPWTASSSEK Unmodified 1177.5251 0.52513192 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;Q6ZS03;Q96CF6;Q2HJC8;H7C3D0 HDLBP Vigilin yes no 0 0 0 4 0 1 45.501 45.545 2 6.1046E-17 11966 20230619_1883_Aki_TMTPro18x_K_F4 266.24 196.64 51990 45055 49829 55209 57764 58981 51612 57327 83240 70191 72326 64063 71272 56743 59691 75313 73021 67598 48075 41326 50937 54970 59239 59337 53382 59003 82549 70099 74588 65103 72214 59769 61722 74907 69699 64307 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36011000 3462 292 3304 6368 5247 5247 1 9606 Homo sapiens -0.05652964358182544 DAQDAEAAMDGAELDGR Unmodified 1733.7163 0.71625652 233 A0A024R3A8;Q9BRL6-2;Q9BRL6 SRP46;SRSF8 Serine/arginine-rich splicing factor 8 yes no 0 0 0 1 0 1 49.985 49.985 3 0.00036278 14360 20230619_1880_Aki_TMTPro18x_K_F1 74.618 58.496 24067 19542 30762 29340 28907 31684 29332 28769 33467 35446 38288 47954 36688 33684 38717 39976 37858 43169 22304 17969 30654 28848 30167 31786 29696 29782 34064 35833 39060 47589 37604 35530 39297 40249 36267 40949 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32764000 3463 233 3305 6369 5248 5248 1 9606 Homo sapiens -0.12125295899886623 DAQDAEAAMDGAELDGR Oxidation (M) 1749.7112 0.71117114 233 A0A024R3A8;Q9BRL6-2;Q9BRL6 SRP46;SRSF8 Serine/arginine-rich splicing factor 8 yes no 0 1 0 1.5 0.5 1 1 60.753 60.758 3 0.030239 18769 20230619_1880_Aki_TMTPro18x_K_F1 45.14 35.856 38961 33132 37482 40892 27656 42642 36085 42510 46435 45762 46502 40990 47663 39388 41472 52257 43862 47868 36023 30393 38083 40683 29847 42952 36248 43505 46719 45931 47713 41813 48305 41369 42475 52028 41971 45497 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 585200000 3464 233 3305 6370;6371 5249 5249 143 1 9606 Homo sapiens -0.13369599762495454 DAQDVQASQAEADQQQTR Unmodified 1987.8831 0.88313893 1989 Q9P2E9;A7BI36;Q9P2E9-3;A1A5C5;A1A5C4;F8W7S5 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 1 0 1 35.549 35.549 3 2.2936E-25 8203 20230619_1880_Aki_TMTPro18x_K_F1 218.13 202.86 30646 20381 27970 24035 29942 31688 32882 31931 38228 33940 43557 41389 40500 37604 31679 39151 47335 51475 28284 18707 28641 24090 31024 31473 33153 32652 38823 34430 44275 41566 41046 38999 33274 39984 45167 48746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142470000 3465 1989 3306 6372 5250 5250 1 9606 Homo sapiens -0.0712873175061759 DAQEFAADVR Unmodified 1120.5149 0.51490158 730 P25440-2;P25440;P25440-3;A0A0G2JK44;A0A140T9E9;H0Y6K2;A0A024RCR5;X5CF57;A0A1U9X7A8;P25440-4;A0A1U9X7B8;A0A1U9X7B4;A0A1U9X7B3;A0A140T9V2;A0A0G2JHL0;A0A140T9F7;U3KQA6 BRD2 Bromodomain-containing protein 2 yes no 0 0 0 1.5 0.5 1 1 44.49 44.532 2 0.0068719 11924 20230619_1881_Aki_TMTPro18x_K_F2 85.963 73.737 151750 116170 154410 142490 152510 190780 173010 161940 219620 183940 198130 194250 194400 177280 173510 205790 210490 205850 140280 106600 156570 142390 159350 188530 174660 168010 220110 185160 204070 196200 197660 184880 179020 206260 201000 195540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71064000 3466 730 3307 6373;6374 5251;5252 5252 2 9606 Homo sapiens -0.040535272927627375 DAQELYAAGENR Unmodified 1335.6055 0.6055075 4024 Q6ICS0;Q59EP1;B4DPJ2;Q5T0G8;P50995-2;P50995;B7Z6L0 ANXA11 Annexin;Annexin A11 yes no 0 0 0 1.5 0.5 1 1 42.778 42.819 2 8.5299E-13 11112 20230619_1881_Aki_TMTPro18x_K_F2 206.36 174.87 115690 83827 97212 118210 124330 129260 139380 138260 171680 159400 143080 129690 182620 128680 123050 180780 154700 146970 106760 77057 100840 116650 127420 130070 140590 141150 171990 159100 149710 133080 182150 135630 128240 178760 147660 139980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162920000 3467 4024 3308 6375;6376 5253;5254 5254 2 9606 Homo sapiens -0.04887103035139262 DAQEMADSLGVR Oxidation (M) 1306.5823 0.58232922 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 1 0 1.5 0.5 1 1 39.827 39.862 2 0.00042159 9732 20230619_1881_Aki_TMTPro18x_K_F2 103.69 88.714 67491 50288 64943 75264 87288 94963 73439 81034 97532 69140 81604 75579 80819 59713 69787 79984 75213 76682 62353 46254 66574 74158 88566 94179 75602 83407 97280 70765 84381 75956 81929 63222 71516 79836 71921 72862 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38710000 3468 817 3309 6377;6378 5255;5256 5256 483 2 9606 Homo sapiens -0.058698651441545735 DAQFYCELNYR Unmodified 1477.6296 0.62961376 245 B2R642;A8K6A6;A0A024R3I5;P43121;B3KXZ9;P43121-2 MCAM Cell surface glycoprotein MUC18 yes no 0 0 0 4.5 0.5 2 2 52.405 52.453 2;3 0.00025611 15123 20230619_1883_Aki_TMTPro18x_K_F4 146.71 132.29 185890 167010 199490 206150 175270 198810 222210 213960 266710 259400 248440 217360 277910 213530 237330 273520 250800 270920 172100 153170 201220 204930 185270 201950 222700 218760 268510 258480 256810 222570 280620 223730 243000 273640 239970 257280 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 257990000 3469 245 3310 6379;6380;6381;6382 5257;5258;5259 5257 3 9606 Homo sapiens -0.09009585873127435 DAQHYGGWEHR Unmodified 1354.5803 0.58029581 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 4 0.816 1 1 1 31.401 31.477 4 4.2551E-09 6142 20230619_1882_Aki_TMTPro18x_K_F3 183.37 172.14 118610 97731 112530 108790 158730 156840 149440 136330 198450 153300 183390 176570 168080 140270 177710 149880 190190 178090 109630 89575 115480 109620 160910 154550 152640 141140 198620 154850 188170 176950 172480 146440 181070 152140 181770 168900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 703100000 3470 3900;2497 3311 6383;6384;6385 5260;5261 5260 2 9606 Homo sapiens -0.08281113047041799 DAQIAMMQQR 2 Oxidation (M) 1222.5434 0.54344129 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;Q14980-5;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 2 0 3.5 0.5 1 1 31.908 31.977 3 0.012073 6311 20230619_1883_Aki_TMTPro18x_K_F4 64.39 57.371 14815 13588 20090 17077 26901 24326 23362 23870 29425 21005 26974 28244 22179 25169 24956 22176 26520 24029 13750 12464 20048 17062 27259 24049 23947 24333 29501 21619 27594 28235 22965 25872 25398 22454 25341 22812 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15162000 3471 349;3906 3312 6386;6387 5262 5262 207;208 1 9606 Homo sapiens -0.05892868979481136 DAQIAMMQQR Oxidation (M) 1206.5485 0.54852667 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;Q14980-5;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 1 0 5 0 1 38.22 38.312 2 0.070451 8815 20230619_1885_Aki_TMTPro18x_K_F5 58.246 34.091 28976 22227 21755 26932 32253 33188 30584 31775 35937 20022 26913 26749 24033 20508 29024 22276 27179 22409 26727 20394 22887 26889 32631 33055 31086 32244 35887 21094 27923 26652 24859 21446 29284 22391 25990 21301 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17972000 3472 349;3906 3312 6388 5263 5263 207;208 1 9606 Homo sapiens -0.046485651168950426 DAQIAMMQQR Unmodified 1190.5536 0.55361205 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;Q14980-5;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 6 0 1 43.33 43.424 2 0.0094516 10971 20230619_1886_Aki_TMTPro18x_K_F6 79.986 55.65 50656 42288 49730 56003 68679 70644 60244 64691 77678 55737 62004 55573 61107 51725 63097 58004 62799 56640 46839 38824 50911 55603 69601 70187 61763 66238 77464 56854 64280 56332 62493 53816 64078 58137 60046 53834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51495000 3473 349;3906 3312 6389 5264 5264 1 9606 Homo sapiens -0.03404261254263474 DAQPSFSAEDIAK Unmodified 1377.6412 0.64122431 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 3 0 1 50.989 51.06 2 1.1882E-07 14599 20230619_1882_Aki_TMTPro18x_K_F3 164.48 130.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3474 1104 3313 6390 5265 5265 1 9606 Homo sapiens -0.032490655781202804 DAQQSSSPAADNLR Unmodified 1458.6699 0.66989867 2509 B4DK32;Q14139;Q14139-2;B7Z7P0 UBE4A Ubiquitin conjugation factor E4 A yes no 0 0 0 2 0 1 33.821 33.877 3 2.5672E-16 7226 20230619_1881_Aki_TMTPro18x_K_F2 155.14 140.27 9885 5831.2 9407.5 11678 13775 14827 11575 12408 15257 11560 15141 15623 16604 14197 15591 13088 18334 14045 9120.8 5391.3 9674.8 11338 13908 14689 11913 12820 15318 11862 15607 15628 16854 14631 16006 13235 17486 13345 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60326000 3475 2509 3314 6391 5266 5266 1 9606 Homo sapiens -0.041089479489983205 DAREPVVGAR Unmodified 1068.5676 0.56760585 714 E9PPA0;A0A024RCB5;B7Z705;B4DN31;Q9BWS9-3;Q9BWS9;Q9BWS9-2;H0YC89 CHID1 Chitinase domain-containing protein 1 yes no 0 0 1 3.5 0.5 1 1 29.893 29.973 3 2.8422E-07 5553 20230619_1883_Aki_TMTPro18x_K_F4 164.43 107.86 61603 49951 63386 56090 86538 79201 74413 79280 91201 74325 86581 83870 76163 70248 83669 67084 99189 87366 56973 45789 64526 56484 87618 78385 76259 80808 91726 75694 88591 84235 78476 72749 85704 68660 94671 82809 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42490000 3476 714 3315 6392;6393 5267;5268 5268 2 9606 Homo sapiens 0.03606475560695799 DASDDLDDLNFFNQK Unmodified 1755.7588 0.75877326 2657 Q6IBR8;B5BU01;P20042;Q3B7I9 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 3 1.41 1 1 1 1 1 62.897 62.916 3 2.4361000000000003E-33 19630 20230619_1882_Aki_TMTPro18x_K_F3 252.44 237.48 115220 103340 110780 117410 90398 115490 114130 109310 132310 140870 134610 146110 152710 130550 151910 170600 134210 165530 106570 94702 112650 117420 96299 116780 114290 112980 133930 140830 138910 147560 155230 137290 153630 170450 128800 157160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 826530000 3477 2657 3316 6394;6395;6396;6397;6398 5269 5269 1 9606 Homo sapiens -0.08887577500013322 DASESPGENCQHLLAR Unmodified 1782.7955 0.79550989 310 H7C089;B4DUE0;A0A024R4V7;Q5R3I4 TTC38;FLJ20699 Tetratricopeptide repeat protein 38 yes no 0 0 0 2 0 1 36.709 36.767 3 1.0319E-77 8413 20230619_1881_Aki_TMTPro18x_K_F2 300.51 280.69 15671 11165 15148 15908 20946 23680 21633 23335 25193 25315 32263 30857 26716 26526 26949 23579 31611 28796 14475 10266 15528 15773 21324 23338 21885 23900 25733 25644 32516 30921 27478 27336 27636 24051 30181 27306 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27431000 3478 310 3317 6399 5270 5270 1 9606 Homo sapiens -0.06457604155093577 DASLMVTNDGATILK Oxidation (M) 1563.7814 0.78142296 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 1 0 5.5 0.5 1 1 54.766 54.838 3 1.9419E-08 15781 20230619_1885_Aki_TMTPro18x_K_F5 141.82 99.732 254690 207940 241280 273690 246760 282000 270680 252990 272060 285750 322050 282890 279480 267610 303170 301850 290660 350260 235390 190910 246510 271010 256570 283820 271640 261450 279070 286960 326020 286960 287860 278340 307200 305490 278630 331950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 385630000 3479 3756 3318 6400;6401 5271;5272 5271 2423 2 9606 Homo sapiens 0.02208350363912359 DASLMVTNDGATILK Unmodified 1547.7865 0.78650834 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 6 0 1 58.473 58.538 3 3.9307E-08 17524 20230619_1886_Aki_TMTPro18x_K_F6 139.66 96.851 464900 362840 413230 414770 383880 458850 430980 440720 519680 540030 518580 515270 615850 498490 520300 626720 564940 584010 429360 332710 423650 415340 402860 460250 434710 454070 524670 539740 536300 523800 620760 521650 533820 625040 540230 555080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 691660000 3480 3756 3318 6402 5273 5273 1 9606 Homo sapiens 0.034526542265439275 DASLVTNEDHQR Unmodified 1383.6379 0.63787026 3607 P49454 CENPF Centromere protein F yes yes 0 0 0 2 0 1 33.933 33.99 3 3.3939E-18 7265 20230619_1881_Aki_TMTPro18x_K_F2 162.49 127.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3481 3607 3319 6403 5274 5274 1 9606 Homo sapiens -0.038603156321414644 DASNWSTDK Unmodified 1022.4305 0.43050325 3356 O95433;O95433-2;G3V3W9 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 4 0 1 42.93 42.974 3 0.010965 10823 20230619_1883_Aki_TMTPro18x_K_F4 76.228 40.284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3482 3356 3320 6404 5275 5275 1 9606 Homo sapiens -0.07981478109525142 DASSCQEQLDEFRK Unmodified 1711.7472 0.74716272 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 1 3 0 1 44.446 44.519 3 0.014376 11649 20230619_1882_Aki_TMTPro18x_K_F3 63.754 52.063 41057 35844 39689 48992 41495 48346 50035 43968 53340 49126 51925 54036 55963 52117 48781 63705 61374 67762 37969 32914 40524 48361 43204 48823 50039 45394 54087 49542 53534 54589 56693 54421 50510 64010 58645 64294 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35205000 3483 1566 3321 6405 5276 5276 1 9606 Homo sapiens -0.08024097795009766 DASSTYSQVENLNR Unmodified 1582.7223 0.72232817 1167 A0A140VJD0;Q9UFC0;H7C5S6;Q59FT0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 0 0 0 4 0 1 44.473 44.517 3 2.7717E-16 11532 20230619_1883_Aki_TMTPro18x_K_F4 147.42 140.76 26199 22265 25569 26733 32496 33344 32284 28516 40545 28683 28976 31752 35752 25162 28729 29691 33258 35284 24227 20420 26137 26716 33193 33114 32796 29481 40353 29101 30584 31860 35912 26445 29591 30073 31791 33447 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68594000 3484 1167 3322 6406 5277 5277 1 9606 Homo sapiens -0.045724096060212105 DASTLIR Unmodified 774.42357 0.42356738 4051 Q5SQQ7;Q8IU85-2;Q8IU85 CAMK1D Calcium/calmodulin-dependent protein kinase type 1D yes no 0 0 0 5 0 1 40.29 40.379 2 0.0084502 9693 20230619_1885_Aki_TMTPro18x_K_F5 120.65 23.049 100280 80208 103020 114010 123980 134640 124480 114660 173780 104060 127860 121050 125250 101440 129110 113840 138850 130400 92737 73708 104810 112570 127190 134100 126930 118280 172160 106420 133190 121510 128100 105980 131670 115180 132690 123710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29426000 3485 4051 3323 6407 5278 5278 1 9606 Homo sapiens 0.027332538005680362 DASVAEAWLLGQEPYLSSR Unmodified 2091.0273 0.027283968 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 6 0.816 1 1 1 64.138 64.178 3 2.7093000000000003E-31 19980 20230619_1886_Aki_TMTPro18x_K_F6 230.45 215.69 55966 35575 44260 47891 43895 52345 59484 60546 55816 59338 68422 54262 60332 64234 58773 61471 63332 72211 51588 32704 45965 47416 46078 52757 58968 61236 57556 59874 69165 55717 61839 65756 60063 62417 60613 68440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 457680000 3486 2337;3778;3779 3324 6408;6409;6410 5279;5280 5279 2 9606 Homo sapiens 0.02541141747497022 DATEIQNIQIADGDVCR Unmodified 1916.8898 0.88980421 2164 A8MY26;B7Z606;A8MTY9;O14972-2;O14972;O60768 DSCR3 Down syndrome critical region protein 3 yes no 0 0 0 2 0 1 52.687 52.72 3 2.1056E-06 15638 20230619_1881_Aki_TMTPro18x_K_F2 109.42 97.038 22097 17635 20028 22137 21085 23116 22688 22353 30204 26739 31999 25346 26934 24118 28573 28129 28664 33465 20414 16184 20545 21998 21877 23285 23016 23007 30392 26758 32480 25779 27733 25139 29031 28501 27458 31711 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24866000 3487 2164 3325 6411 5281 5281 1 9606 Homo sapiens -0.0319651012362101 DATGAEEEAPWAATER Unmodified 1702.7435 0.74345755 4205 Q8IVS2-2;Q8IVS2 MCAT Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes no 0 0 0 1 0 1 47.972 47.972 2 0.00011973 13522 20230619_1880_Aki_TMTPro18x_K_F1 105.17 88.539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3488 4205 3326 6412 5282 5282 1 9606 Homo sapiens -0.07980444297163558 DATGVGDGGAFAPNILENK Unmodified 1844.8905 0.89045614 3183 L0R849 EDARADD yes yes 0 0 0 5.5 0.5 1 1 58.029 58.092 3 2.3883E-07 17116 20230619_1885_Aki_TMTPro18x_K_F5 108.96 88.866 122690 101150 113130 123060 86754 149610 118270 116810 38792 151150 155440 166460 183250 160070 131350 178900 204290 188290 113380 92789 115440 122800 93292 148390 115150 122530 49106 151160 155280 168060 183720 166310 138750 179860 194640 178790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 250200000 3489 3183 3327 6413;6414 5283 5283 1 9606 Homo sapiens 0.0018065258780097793 DATLTALDR Unmodified 974.50327 0.50327426 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5;A0A2R8YG21 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 3 0 1 45.032 45.105 2 8.6422E-06 11852 20230619_1882_Aki_TMTPro18x_K_F3 176.44 79.351 213140 171090 188320 209160 272020 305100 283030 277200 352240 266390 302260 317130 297260 258750 286050 339100 333620 324690 196870 156970 194810 209330 276400 300550 286690 284750 352630 271530 312360 317780 303140 272980 293990 338510 318690 308580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 623960000 3490 2908 3328 6415 5284 5284 1 9606 Homo sapiens 0.015002756839066933 DATNVEESFTILTR Unmodified 1594.7839 0.7838658 3903 Q14964 RAB39A Ras-related protein Rab-39A yes yes 0 0 0 4 0 1 60.75 60.752 2 0.0017911 18646 20230619_1883_Aki_TMTPro18x_K_F4 107.65 90.62 24244 16604 20676 27641 17723 16069 19362 19000 22221 24186 22969 23720 22892 19966 21058 22883 26105 22729 22367 15299 21289 26834 18672 17196 19527 19372 22521 24143 23533 23962 23288 20872 21733 22937 24905 21602 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36177000 3491 3903 3329 6416 5285 5285 1 9606 Homo sapiens 0.01026522093229687 DATNVGDEGGFAPNILENK Unmodified 1959.9174 0.91739917 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2 ENO1 Alpha-enolase;Enolase yes no 0 0 0 4 1.73 1 1 2 2 2 1 1 58.974 59.004 2;3;4 1.1691E-60 18021 20230619_1882_Aki_TMTPro18x_K_F3 408.46 390.19 582490 467080 531960 575560 493220 589950 598660 604330 666810 740850 718990 724840 780710 665460 672190 845490 783390 865330 538160 428560 544340 572590 518710 595730 599770 620010 677990 740780 737920 734670 789760 698010 692570 847300 749030 821390 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 42815000000 3492 293 3330 6417;6418;6419;6420;6421;6422;6423;6424;6425;6426 5286;5287;5288;5289;5290;5291 5287 6 9606 Homo sapiens -0.024162835916740733 DATNVGDEGGFAPNILENSEALELVK Unmodified 2701.3083 0.30826943 3418 Q6FHV6;P09104;A8K3B0;P09104-2 ENO2 Gamma-enolase yes no 0 0 0 4 0 1 64.237 64.245 3 1.2361E-13 20101 20230619_1883_Aki_TMTPro18x_K_F4 117.36 109.08 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3493 3418 3331 6427 5292 5292 1 9606 Homo sapiens 0.02566763086088031 DATQITQGPR Unmodified 1085.5465 0.54653606 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;Q86SE4 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 4.5 0.5 1 1 35.951 36.043 2 2.5356E-11 7944 20230619_1883_Aki_TMTPro18x_K_F4 194.06 143.36 39098 22648 34404 42939 29731 24546 41104 40520 53379 44750 56139 52678 50330 44876 57876 36410 62796 51386 36051 20923 35314 41432 31518 26578 41163 40434 53730 45241 57206 52834 51925 46112 58863 37641 59956 48689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103270000 3494 2005 3332 6428;6429 5293;5294 5293 2 9606 Homo sapiens 0.0071846546118194965 DATSRPTDNILIPQLIR Unmodified 1922.0585 0.058524517 1136 B3KQF0;A0A0S2Z5M1;Q9UGP8;B3KNE7 SEC63 Translocation protein SEC63 homolog yes no 0 0 1 1.5 0.5 1 1 56.584 56.593 3 1.355E-13 17233 20230619_1881_Aki_TMTPro18x_K_F2 160.8 140.34 97886 77984 89390 92361 84638 101560 98859 97890 106420 98558 96472 96597 111080 93853 109220 127520 106280 110630 90433 71527 91469 92235 88754 101900 99101 100280 107600 99534 100120 98134 112820 98663 111040 126610 101740 105240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 315810000 3495 1136 3333 6430;6431 5295;5296 5296 2 9606 Homo sapiens 0.1343775957222988 DATYTSAR Unmodified 883.40356 0.40356022 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 2.5 0.5 1 1 30.287 30.367 2 0.00041503 5736 20230619_1882_Aki_TMTPro18x_K_F3 164.53 144.97 25116 11395 35993 35349 52387 52731 34872 52176 33580 21112 40532 44786 23945 32065 42874 11132 44547 38224 23242 10645 35888 33913 52571 51937 36203 52456 34498 23710 40597 43929 25943 32357 43174 13150 42562 36041 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33983000 3496 1091 3334 6432;6433 5297 5297 1 9606 Homo sapiens -0.04280541930052095 DATYYSYQNR Unmodified 1279.5469 0.54692999 1596 A0A669KB12;Q09472;Q7Z6C1 EP300 Histone acetyltransferase p300 yes no 0 0 0 5 0 1 39.655 39.745 2 2.5973E-09 9402 20230619_1885_Aki_TMTPro18x_K_F5 196.99 184.77 23875 17693 21695 23791 27490 25763 28657 29131 30612 27329 28538 26802 25730 22816 27030 29091 32522 28504 22047 16254 22317 23551 28093 25985 28883 29473 30985 27698 29249 27111 26426 23995 27776 29095 31036 27094 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16322000 3497 1596 3335 6434 5298 5298 1 9606 Homo sapiens -0.08166159609618262 DAVAHCHEAER Unmodified 1293.552 0.55203214 3613 P49792;A0A8V8TLA0;A0A8V8TL79;A0A8Q3SIN4;Q99666;O14715;A0A8Q3SII4;A0A8Q3SII5;J3KQ37;V9HWE4;D3DX73;F8W705;Q99666-2;H0YBN8;A0A8Q3SIQ7 RANBP2;RGPD5;RGPD8;HEL161;hCG_1994636 E3 SUMO-protein ligase RanBP2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 yes no 0 0 0 1 0 1 23.106 23.106 3 0.034083 3773 20230619_1880_Aki_TMTPro18x_K_F1 57.792 41.902 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3498 3613 3336 6435 5299 5299 1 9606 Homo sapiens -0.08300179018647214 DAVDWVHYK Unmodified 1131.5349 0.53490874 1423 B3KXN5;A0A6Q8PHB5;A8K6K2;A0A384MED8;A0A6Q8PHP0;P49902-2;P49902 NT5C2 Cytosolic purine 5'-nucleotidase yes no 0 0 0 5.5 0.5 1 1 50.525 50.602 3 0.00030122 14172 20230619_1886_Aki_TMTPro18x_K_F6 107.15 68.136 66463 59981 66906 75141 73401 96800 82584 71025 123770 74733 82825 74253 73783 66693 73525 84095 88359 92745 61499 55020 68105 74886 76172 95605 83929 74476 121930 75464 86440 75201 75645 69969 75650 84674 84428 87982 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72147000 3499 1423 3337 6436;6437 5300 5300 1 9606 Homo sapiens -0.025597315621553207 DAVFIPAGWDNEK Unmodified 1460.6936 0.69359423 419 A0A024R6Z0;O43237-2;O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 5 0 1 61.313 61.364 3 0.00010983 18495 20230619_1885_Aki_TMTPro18x_K_F5 80.96 72.23 111450 90205 98330 121350 105190 119730 123400 139130 154580 152180 147240 141620 171400 135570 125170 179460 152870 179710 102950 82839 101240 119950 109310 121600 124350 141080 155460 152770 152370 144130 171920 142440 129940 179470 146180 170590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120160000 3500 419 3338 6438 5301 5301 1 9606 Homo sapiens -0.018324824445471677 DAVIEFLLDK Unmodified 1161.6281 0.62814043 919 B2RB99;B4DXL5;A0A0A0MQR2;Q9BY42;A2A2L5;B4DEJ8;A2A2L6 RTFDC1 Protein RTF2 homolog yes no 0 0 0 6 0 1 65.363 65.407 3 0.03245 20524 20230619_1886_Aki_TMTPro18x_K_F6 54.198 37.172 13742 12638 18139 17432 16306 15430 17758 15759 20956 18269 20012 18257 17101 15771 17689 19019 19583 19792 12750 11604 18025 17185 17091 15769 17922 16156 21118 18334 20439 18457 17585 16519 18090 19100 18720 18789 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3306700 3501 919 3339 6439 5302 5302 1 9606 Homo sapiens 0.05379148100405473 DAVITVPVFFNQAER Unmodified 1704.8835 0.88352026 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2;A0A024R3G0;J3KTF1;J3QL06 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 7.5 0.5 2 2 62.831 62.862 2;3 1.9551000000000003E-25 19014 20230619_1888_Aki_TMTPro18x_K_F8 192.65 156.2 107790 98373 95997 118690 119660 131080 120600 123760 135350 144480 124870 173000 137390 128990 136020 174080 155380 171110 99651 90199 98994 118330 122480 131460 122000 127500 136770 145720 129520 172680 139880 136800 139620 173930 148580 162500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2102699999.9999998 3502 874 3340 6440;6441;6442;6443 5303;5304;5305 5304 3 9606 Homo sapiens 0.05927384497863386 DAVLLLFANK Unmodified 1102.6386 0.63864553 3472 P18085;C9JAK5;C9JPM4;U3KQF2 ARF4 ADP-ribosylation factor 4 yes no 0 0 0 2.5 0.5 1 1 64.085 64.105 3 0.00038393 20167 20230619_1882_Aki_TMTPro18x_K_F3 108.43 73.901 48018 29506 42705 46935 39064 72793 51095 44424 90227 57913 56777 64235 66473 66371 74123 70552 64498 92959 44291 27183 43836 46246 41516 70888 51973 47717 88264 58132 60318 64979 67974 68609 74698 72090 62001 87951 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 93432000 3503 3472 3341 6444;6445 5306;5307 5307 2 9606 Homo sapiens 0.09143175545523263 DAVLLVFANK Unmodified 1088.623 0.62299547 258;1931 P84077;A0A024R3Q0;A0A8V8TQC0;A0A8V8TNZ5;P61204;A0A8V8TQP8;A0A024R0Y6;A0A8V8TNZ0;B4DEB9;F5H423;B4E190;P61204-2;C9J1Z8;A4D0Z3;B4DLJ3;P84085 ARF1;ARF3;ARF5 ADP-ribosylation factor 1;ADP-ribosylation factor 3;ADP-ribosylation factor 5 no no 0 0 0 1.5 0.5 1 1 62.951 62.956 3 0.0063608 19681 20230619_1880_Aki_TMTPro18x_K_F1 70.908 45.691 26067 19887 24475 25711 21062 29061 23633 22058 32901 29918 28201 37435 35397 31747 36269 37261 31483 43257 24081 18260 24955 25522 22285 28957 23968 23243 32812 30061 29543 37438 35947 33224 36611 37687 30250 40979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 582020000 3504 258;1931 3342 6446;6447 5308 5308 1 9606 Homo sapiens 0.08222889028456848 DAVQLETLELPPGCVR Unmodified 1795.9138 0.91383411 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;H0Y827 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 0 0 4.5 0.5 1 1 59.144 59.172 3 3.8826E-06 17935 20230619_1883_Aki_TMTPro18x_K_F4 114.29 94.614 56091 45745 58553 57405 60621 75958 81677 82629 103970 61842 62363 60875 61761 51876 72566 63182 65652 66688 51884 41978 59333 57278 63456 75510 81766 83362 102840 63653 65936 61565 63577 54419 73166 63539 62889 63299 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290690000 3505 167 3343 6448;6449 5309;5310 5309 2 9606 Homo sapiens 0.04771375100699515 DAVSGLAFR Unmodified 934.48723 0.48723027 3267 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 0 0 0 6.5 0.5 1 1 48.495 48.578 2 0.0020707 12932 20230619_1887_Aki_TMTPro18x_K_F7 129.72 98.349 139420 114190 114510 140610 132790 160230 145250 153260 206140 158710 142900 150100 168670 135590 157110 168980 158990 162710 128720 104760 118850 140060 137100 160340 147550 157160 203960 159960 150770 152270 170750 142150 160140 168890 152120 154590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152710000 3506 3267 3344 6450;6451 5311 5311 1 9606 Homo sapiens 0.017366142376545213 DAVSGMGVIVHIIEK Unmodified 1566.844 0.84396364 1465 A0A384NL22;P49720 PSMB3 Proteasome subunit beta type-3 yes no 0 0 0 8 0 1 62.358 62.383 3 2.9435E-05 18816 20230619_1888_Aki_TMTPro18x_K_F8 97.45 73.068 57122 38739 51210 53889 52423 60139 50010 47428 136250 60393 61842 54649 70735 57067 63619 64317 56476 69376 52717 35615 52541 53236 54517 60035 53145 49691 130700 60391 67248 55849 71574 59205 64431 64800 54194 65793 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 344840000 3507 1465 3345 6452 5312 5312 1 9606 Homo sapiens 0.08321541222812812 DAVTTTVTGAK Unmodified 1062.5557 0.55570376 4102 Q6FHZ7;Q99541;B4DJK9;B4DNH6 ADFP;PLIN2 Perilipin;Perilipin-2 yes no 0 0 0 6 0 1 43.381 43.474 2 1.7555E-25 10988 20230619_1886_Aki_TMTPro18x_K_F6 229.17 175.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3508 4102 3346 6453 5313 5313 1 9606 Homo sapiens 0.02692814026841006 DAVTYTEHAK Unmodified 1133.5353 0.53530267 2211 B2R4R0;P62805;Q0VAS5 HIST1H4H;HIST1H4A Histone H4 yes no 0 0 0 4.75 2.05 1 1 1 3 1 2 2 1 38.252 38.304 3 5.8161E-10 8654 20230619_1882_Aki_TMTPro18x_K_F3 201.48 137.67 4335800 3172700 3810800 3953000 4812600 4815800 4451400 4692700 5809800 4667900 5418500 5013600 5472800 4509500 4802300 4198500 5809200 5169100 4002500 2912400 3930000 3939700 4909600 4802600 4551300 4800500 5822700 4731900 5576400 5056900 5551700 4654200 4946700 4281100 5544000 4901700 13 13 13 13 13 13 13 13 13 13 13 13 13 13 13 13 13 13 150050000000 3509 2211 3347 6454;6455;6456;6457;6458;6459;6460;6461;6462;6463;6464;6465 5314;5315;5316;5317;5318;5319;5320;5321;5322;5323;5324;5325;5326;5327 5316 14 9606 Homo sapiens -0.026123566329715686 DAVVGRPSMDK Unmodified 1173.5812 0.58120701 4099 Q6DD88;F5H6I7;B4DXC4 ATL3 Atlastin-3 yes no 0 0 1 6 0 1 39.102 39.185 3 0.0037774 9198 20230619_1886_Aki_TMTPro18x_K_F6 73.466 50.549 79514 65777 74612 77249 79140 91961 93710 82610 124710 97027 92477 85741 103770 82827 95654 127360 110850 91227 73492 60317 76302 77273 82331 91661 94532 85442 123940 97035 96847 87557 105170 87866 98419 125150 105770 87103 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70829000 3510 4099 3348 6466 5328 5328 1 9606 Homo sapiens 0.0013596527762729238 DAVVQHSQLAAAVENLK Unmodified 1791.9479 0.94791144 18 D6RB59;A0A024QYZ6;O60645;Q69YP2 EXOC3;DKFZp762K123 Exocyst complex component 3 yes no 0 0 0 7 0 1 54.729 54.793 3 2.2048E-13 15678 20230619_1887_Aki_TMTPro18x_K_F7 149.73 138.41 109130 96991 104440 130840 126600 142990 128400 130780 149170 133990 132260 134340 157030 137760 149510 157860 157150 165130 100930 89044 106980 129440 129850 143350 129980 134540 150140 135310 137620 136530 159160 143060 152630 158700 150340 156740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235850000 3511 18 3349 6467 5329 5329 1 9606 Homo sapiens 0.08361539584007005 DAVVYPILVEFTR Unmodified 1520.8239 0.82388012 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 6.2 2.64 1 2 2 64.599 64.618 2;3 9.074E-21 19777 20230619_1888_Aki_TMTPro18x_K_F8 253.1 224.93 116360 90751 96390 120200 121860 123220 129890 127700 149110 129670 140690 143560 129770 130010 149730 152800 139660 158000 107410 83338 100100 118970 124750 124490 131060 130230 150420 131400 144350 144690 133870 135670 151380 153480 133850 149940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 487650000 3512 874 3350 6468;6469;6470;6471;6472 5330;5331;5332 5332 3 9606 Homo sapiens 0.08430113554436502 DAWGPGAAK Unmodified 871.41882 0.41881635 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6;Q9UP52-2;Q9UP52-3;Q9UP52 TFRC;TFR2 Transferrin receptor protein 1;Transferrin receptor protein 1, serum form;Transferrin receptor protein 2 yes no 0 0 0 6.2 0.748 1 2 2 44.628 44.713 2;3 0.0027437 11567 20230619_1886_Aki_TMTPro18x_K_F6 85.676 56.009 564370 466840 517780 488790 659940 671640 514580 518260 811570 449090 418510 400250 458730 365980 431020 429650 530500 425870 521540 427640 531620 494410 670650 662120 536240 538100 793510 457070 449460 407470 465760 382190 444200 430570 505900 404920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 648430000 3513 1817 3351 6473;6474;6475;6476;6477 5333;5334;5335 5334 3 9606 Homo sapiens -0.022036303421828052 DAYCSEVK Unmodified 970.4066 0.40659669 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 3 0 1 40.336 40.393 2 0.0023351 9749 20230619_1882_Aki_TMTPro18x_K_F3 138.54 82.534 125140 62449 147620 173130 183010 205600 153010 184010 169230 127340 198350 224020 168300 171610 217810 82283 240000 212650 115600 58150 148760 165890 186470 204690 156670 187940 172420 134700 201110 221010 175260 174030 221050 91887 229230 200700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97146000 3514 630 3352 6478 5336 5336 1 9606 Homo sapiens -0.07979034867537393 DAYLVHLIQR Unmodified 1226.6772 0.6771563 2103 A8K7A1;Q9Y6V7;Q9NVY6;Q69YV6;Q9Y6V7-2 DDX49;DKFZp564G1016 Probable ATP-dependent RNA helicase DDX49 yes no 0 0 0 1.5 0.5 1 1 52.297 52.316 3 2.8936E-10 15312 20230619_1880_Aki_TMTPro18x_K_F1 182.65 124.79 39861 33539 37411 42646 39150 39150 43800 43447 50072 50772 47237 44079 52629 42601 43261 54869 51159 50895 36846 30777 38261 42275 40630 39966 44087 44287 50569 50714 48806 45021 53091 44655 44655 54684 48870 48384 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 191440000 3515 2103 3353 6479;6480 5337;5338 5337 2 9606 Homo sapiens 0.07288481180034978 DAYSGGAVNLYHVR Unmodified 1520.7372 0.73719038 3517 P28074;A0A140VJS7;P28074-3 PSMB5 Proteasome subunit beta type-5 yes no 0 0 0 7.5 0.5 1 1 43.692 43.737 3 4.5652E-37 10790 20230619_1887_Aki_TMTPro18x_K_F7 276.25 255.82 107250 86489 94506 91860 112280 131910 117530 104840 272110 96358 95784 101210 125310 91146 103670 117610 117230 113450 99066 79245 97332 92882 115790 129730 122730 108760 260850 98448 107820 102220 125930 95816 106620 117490 112000 107820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 286280000 3516 3517 3354 6481;6482 5339;5340 5339 2 9606 Homo sapiens -0.002348729473851563 DAYSSFGSR Unmodified 988.42502 0.42502394 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;B4E132;B4E010;B4E3C4;O15523-3;C9J081;A0A2R8Y650;A0A2R8YCU0;A0A2R8YF89;B4DLA0;C9J8G5;A0A087WX09 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 5 0.816 1 1 1 39.719 39.792 2 3.6161E-06 9416 20230619_1885_Aki_TMTPro18x_K_F5 186.91 159.65 512320 405730 512880 546100 667180 696930 578800 621400 850480 662790 741760 707140 736050 575160 591920 721580 825700 707880 473640 372630 523400 541790 678630 691540 597100 640920 846200 669410 765360 711610 744490 605570 617990 721640 786950 672930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 519590000 3517 1018 3355 6483;6484;6485 5341;5342;5343 5342 3 9606 Homo sapiens -0.06965156901310365 DAYTHPQFVTDVMK Oxidation (M) 1666.7661 0.76610724 3692 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 1 0 6 0 1 47.615 47.696 3 0.0004249 12885 20230619_1886_Aki_TMTPro18x_K_F6 88.561 69.729 45144 28838 33414 43679 35336 45886 40286 40555 60599 46196 45396 61623 68033 57907 38914 78755 72150 83766 41597 26546 35017 42884 36810 46076 40942 41968 59960 46901 48352 61738 67382 60955 42140 78952 68792 79466 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63315000 3518 3692 3356 6486 5344 5344 2380 1 9606 Homo sapiens -0.04060516433310113 DAYTHPQFVTDVMK Unmodified 1650.7712 0.77119262 3692 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 7 0 1 52.012 52.086 3 5.1141E-07 14537 20230619_1887_Aki_TMTPro18x_K_F7 135.37 112.76 63197 39377 41449 53905 36976 63696 55106 53918 72885 69232 61434 83088 91307 81701 54717 115310 112620 119920 58183 36210 43956 53335 39516 63369 55035 56177 72817 69607 64981 83684 90614 86083 59814 115390 107240 113830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162590000 3519 3692 3356 6487 5345 5345 1 9606 Homo sapiens -0.028162125706785446 DCALTVVALR Unmodified 1116.5961 0.59612879 885 A0A087X0W9;Q8N6M0-2;Q8N6M0 OTUD6B OTU domain-containing protein 6B yes no 0 0 0 7 0 1 52.354 52.428 2 0.00037643 14674 20230619_1887_Aki_TMTPro18x_K_F7 148.52 60.628 126640 102380 111720 127700 107820 122010 126690 121310 142100 141110 132480 129280 149580 118800 123050 158400 142690 152760 116970 93948 114770 126810 112870 123800 127120 124550 143570 141190 137090 131470 150820 125040 126880 158110 136400 145110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99380000 3520 885 3357 6488 5346 5346 1 9606 Homo sapiens 0.04249457145601809 DCAVKPCQSDEVPDGIK Unmodified 1916.8608 0.86081227 4359 Q96HE7;G3V5B3;G3V3E6;G3V503 ERO1L ERO1-like protein alpha yes no 0 0 1 4 0 1 46.243 46.286 3 0.062503 12271 20230619_1883_Aki_TMTPro18x_K_F4 43.798 33.602 18954 14138 20530 16601 20106 20546 24435 18210 26950 25283 24987 24984 30346 24186 23817 30749 26622 29358 17528 12970 20695 16626 21015 20432 24449 18967 27238 25177 25960 25357 30482 25330 24528 30696 25464 27889 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30398000 3521 4359 3358 6489 5347 5347 1 9606 Homo sapiens -0.06094370744222033 DCDGLVLQSK Unmodified 1133.5387 0.53867349 887 Q4W5H4;E0CX15;A0A087X152;A8K385;O95185-2;O95185 UNC5C Netrin receptor UNC5C yes no 0 0 0 4 0 1 48.419 48.459 3 0.082858 13329 20230619_1883_Aki_TMTPro18x_K_F4 38.714 24.416 85958 56325 73130 80777 75259 72290 83751 76822 94028 99543 110090 113290 123430 103350 98816 139940 121020 136620 79286 51809 75419 79438 78184 73866 84275 78823 95881 99797 112780 114110 124380 108870 102380 139720 115690 129740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25506000 3522 887 3359 6490 5348 5348 1 9606 Homo sapiens -0.022754298506015402 DCDPQVVEEIR Unmodified 1358.6136 0.61362935 1614 D6R9E3;A0A6Q8PFL9;A0A6Q8PF18;A0A6Q8PHG4;Q9BWT6 MND1 Meiotic nuclear division protein 1 homolog yes no 0 0 0 1 0 1 45.315 45.315 2 0.090835 12463 20230619_1880_Aki_TMTPro18x_K_F1 66.55 59.661 25418 19283 23283 23955 18433 26127 21627 24215 28258 28314 23894 24999 36301 26030 20223 38730 35293 34381 23476 17699 23764 23838 19679 26196 21840 24971 28264 28302 25251 25584 35877 27510 21780 38412 33616 32705 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33147000 3523 1614 3360 6491 5349 5349 1 9606 Homo sapiens -0.05133292110031107 DCEAEVR Unmodified 877.35998 0.35998084 1860;2118 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6;A0A994J6A3;A8K8B0;P30154;P30154-2;P30154-4;P30154-3;B7Z1G3;P30154-5;H0YDG7 PPP2R1A;PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform no no 0 0 0 1 0 1 29.596 29.596 2 0.046609 5820 20230619_1880_Aki_TMTPro18x_K_F1 87.754 60.23 23308 10107 34066 28707 46058 42335 32161 42229 35262 21193 42072 45557 28231 35690 43766 10479 44919 41542 21571 9424.8 33842 27618 46425 41746 33376 42556 35944 23294 42291 44768 30065 35783 44104 12790 42944 39140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19500000 3524 1860;2118 3361 6492 5350 5350 1 9606 Homo sapiens -0.08360474698827147 DCEAYALQMTK Oxidation (M) 1344.569 0.56898734 3579 P42285;A8K6I4 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 1 0 4 0 1 45.938 45.981 3 0.0021264 12171 20230619_1883_Aki_TMTPro18x_K_F4 73.655 63.17 53320 39626 50835 54617 56881 70390 59770 61695 72246 56928 60122 57162 66120 49387 55839 71610 62191 61889 49256 36412 51973 54111 58764 69743 60480 63486 72374 57830 62490 57810 66767 52392 57401 71012 59440 58886 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50149000 3525 3579 3362 6493 5351 5351 2249 1 9606 Homo sapiens -0.08951439247766757 DCEDPNPLIR Unmodified 1227.5554 0.55538619 1172;3819 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087WZQ6;A0A087WU93;K7ERB2;K7EN71;Q10567-4;Q10567-3;Q10567-2;Q10567;C9J1E7 AP2B1;DKFZp781K0743;AP1B1 AP-2 complex subunit beta;AP complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 1.5 0.5 1 1 43.851 43.892 2 2.2254E-09 11794 20230619_1880_Aki_TMTPro18x_K_F1 210.01 169.97 241020 197660 213880 236530 191590 221210 232560 234760 300800 290280 278380 268040 322190 239860 246190 344150 318050 310430 222660 181290 219340 235520 202120 225190 234240 240390 301740 289740 288420 272300 323670 254010 256180 341960 303560 295230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 491130000 3526 1172;3819 3363 6494;6495 5352;5353 5352 2 9606 Homo sapiens -0.049289289646594625 DCEECIQLEPTFIK Unmodified 1780.8012 0.80117212 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;H0YGI8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 3 1.41 1 1 1 1 1 60.588 60.606 3 2.1798E-09 18688 20230619_1882_Aki_TMTPro18x_K_F3 166.62 155.18 387310 312460 362280 370820 301090 364720 340080 325760 363110 472940 411600 393030 467560 349160 386880 507850 454710 502840 357910 286580 369210 369680 318950 368410 341560 339500 371220 467490 422300 401200 471290 370340 399260 507080 434740 477480 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1648999999.9999998 3527 2088 3364 6496;6497;6498;6499;6500 5354;5355;5356;5357;5358 5356 5 9606 Homo sapiens -0.0579964168762217 DCEQAENWMAAR Unmodified 1479.5871 0.58709702 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 47.132 47.209 2 1.0853E-12 13149 20230619_1881_Aki_TMTPro18x_K_F2 203.02 191.86 76129 62459 77890 69009 63573 71109 84413 84853 95427 98587 86971 91077 110620 87255 90143 109980 104640 110090 70409 57244 78715 69253 67729 72082 84262 86080 96318 98656 90687 92672 111140 91382 92933 110100 100010 104550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169590000 3528 1022;3868 3365 6501;6502 5359 5359 1 9606 Homo sapiens -0.13351304273032838 DCEVIER Unmodified 919.40693 0.40693104 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;O00429-7;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402 DNM1L Dynamin-1-like protein no no 0 0 0 1 0 1 35.338 35.338 2 0.0059072 8105 20230619_1880_Aki_TMTPro18x_K_F1 137.18 74.464 127530 68579 131170 185250 191830 184950 173340 182740 221140 144590 173590 170090 193440 151450 136020 98010 219990 194300 117690 63794 134160 177170 193800 186820 177270 185860 220460 149090 181100 170780 194070 154230 143710 104880 209500 183620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218130000 3529 3212;3213 3366 6503 5360 5360 1 9606 Homo sapiens -0.055996151476847444 DCEVVMMIGLPGAGK Oxidation (M) 1591.7408 0.74082047 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 1 0 7 0 1 60.561 60.604 3 7.9784E-05 18021 20230619_1887_Aki_TMTPro18x_K_F7 95.264 83.051 43215 35867 35595 46236 42722 45672 40018 47272 52479 46566 42482 45699 47831 41040 47284 54779 49919 48016 39905 32920 36957 45819 43770 46263 40903 48149 52371 47079 44320 46283 48633 43203 48277 54428 47723 45685 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126480000 3530 3776 3367 6504 5361 5361 2459 1 9606 Homo sapiens -0.031380305517359375 DCEVVMMIGLPGAGK Unmodified 1575.7459 0.74590585 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 7 0 1 62.742 62.777 2 3.2966E-18 19071 20230619_1887_Aki_TMTPro18x_K_F7 247.54 215.54 402590 321960 370650 405660 325110 434480 420730 428610 438830 478860 417370 425640 494920 429990 355700 538170 279690 543570 371970 295480 378820 403160 344490 436810 419320 439560 445560 479590 432570 434750 495940 449190 361100 538790 270160 515260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 669800000 3531 3776 3367 6505 5362 5362 1 9606 Homo sapiens -0.01893726689104369 DCFGCLR Unmodified 926.37386 0.37385677 340 A0A024R5H0;O75531;B2R4V4 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed yes no 0 0 0 5.5 1.12 1 1 1 1 43.047 43.121 2 0.007086 10826 20230619_1886_Aki_TMTPro18x_K_F6 127.95 97.229 2829400 2248700 2641800 2840300 3046600 3329300 3251300 3478300 4247000 2279000 2701700 2452400 2343100 2058800 2771200 2577800 3001900 2480000 2614400 2063800 2706700 2826400 3139700 3332300 3296100 3510200 4201200 2376000 2828100 2471200 2424800 2163600 2821900 2577400 2866400 2358500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3271799999.9999995 3532 340 3368 6506;6507;6508;6509 5363;5364 5364 2 9606 Homo sapiens -0.09227520471392836 DCFVTGK Unmodified 825.36909 0.36908897 3897 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 0 0 0 5.5 0.5 1 1 44.763 44.846 2 0.014627 11584 20230619_1886_Aki_TMTPro18x_K_F6 112.37 48.717 104460 65393 87796 106810 114150 124120 115610 122740 152240 120610 130070 135010 139420 121590 112780 117710 169440 154810 96326 60261 91089 104610 116610 124100 117590 125410 152060 122510 134900 135910 140820 125710 118290 120420 161470 146700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50957000 3533 3897 3369 6510;6511 5365 5365 1 9606 Homo sapiens -0.05058081342497189 DCGATWVVLGHSER Unmodified 1585.7307 0.73072479 3674 V9HWK1;P60174;P60174-3;B4DUI5;P60174-4;U3KPZ0;U3KQF3;U3KPS5 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 5.75 1.48 1 1 1 1 46.87 46.933 3 5.5407E-29 12404 20230619_1885_Aki_TMTPro18x_K_F5 255.08 228.37 439870 369460 416440 402160 420370 476940 484390 428790 549790 532670 546080 518460 542330 517770 501110 576290 589100 581290 406630 338530 425000 404620 438240 475640 486620 444250 556250 532550 560100 527060 552140 537000 515550 578290 562740 552080 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 10115000000 3534 3674 3370 6512;6513;6514;6515 5366;5367;5368;5369 5367 4 9606 Homo sapiens -0.03871134170435653 DCGATWVVLGHSERR Unmodified 1741.8318 0.83183582 3674 V9HWK1;P60174;P60174-3;B4DUI5;P60174-4;U3KPZ0;U3KQF3;U3KPS5 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 1 7.5 0.5 1 1 41.841 41.875 4 4.8324E-11 10241 20230619_1888_Aki_TMTPro18x_K_F8 165.64 148.42 31994 27058 31168 29005 32818 19810 35608 32624 16088 36857 39416 43102 37910 31757 42958 33224 36580 36635 29584 24789 31723 29050 33849 21085 35167 32574 18506 37135 39332 43054 38952 33211 43187 33592 35061 34760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126430000 3535 3674 3371 6516;6517 5370 5370 1 9606 Homo sapiens -0.009406824677171244 DCGEYAHTR Unmodified 1107.4404 0.44035643 513 A0A024R8D4;Q9Y399 MRPS2 28S ribosomal protein S2, mitochondrial yes no 0 0 0 1 0 1 26.495 26.495 3 0.070659 4632 20230619_1880_Aki_TMTPro18x_K_F1 42.336 32.649 2388 1541.5 2042.4 3450.7 3544.7 4291.1 2942.3 2746.6 4087.5 2096.3 3404.2 2286.2 2322.3 2908 3010.7 1555.9 3747.1 1941.7 2202.6 1427.3 2135.2 3330.9 3552.9 4235.1 3034.5 2897.3 4062.8 2166.3 3470.6 2336.7 2444.7 2903.9 3081 1613 3565.6 1846.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7675800 3536 513 3372 6518 5371 5371 1 9606 Homo sapiens -0.10906613375823326 DCGVGFR Unmodified 809.34902 0.34902223 2934 E9PPJ5;E9PLM6;P21741 MDK Midkine yes no 0 0 0 4 0 1 37.365 37.409 2 0.013393 8492 20230619_1883_Aki_TMTPro18x_K_F4 114.02 98.584 124300 135490 144530 134600 83506 61850 61245 53114 74204 334320 245710 277830 300360 224130 136250 368430 323110 290380 115330 123950 144030 135170 90717 68169 63776 62461 82955 320620 246360 282520 296920 240670 153030 362810 307120 276750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144090000 3537 2934 3373 6519 5372 5372 1 9606 Homo sapiens -0.06327832282454438 DCHEEVYAGSHQYPGR Unmodified 1903.7908 0.79075887 257 A0A024R3P9;Q9H3P7 ACBD3 Golgi resident protein GCP60 yes no 0 0 0 2.5 0.5 1 1 32.646 32.712 4 7.079E-26 6760 20230619_1881_Aki_TMTPro18x_K_F2 234.63 217.61 40866 21632 32916 41284 47659 38269 35655 43523 52783 49893 55113 60232 59301 54979 40246 59451 55782 60322 37644 19996 34344 40001 47958 39056 37196 44258 52910 50399 56619 60489 59526 57094 42226 59668 53253 57268 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59437000 3538 257 3374 6520;6521 5373;5374 5373 2 9606 Homo sapiens -0.12498488297865151 DCIFTIDPSTAR Unmodified 1394.65 0.65001485 4211 Q8IYB7;B4DI15;Q8IYB7-3;Q8IYB7-2 DIS3L2 DIS3-like exonuclease 2 yes no 0 0 0 5 0 1 55.172 55.239 2 0.00054372 15942 20230619_1885_Aki_TMTPro18x_K_F5 104.05 88.183 39038 32671 37286 41891 36266 41103 40062 42896 48701 56378 49033 49708 60522 47181 45190 61315 58117 62332 36089 29984 38035 41535 37877 41664 40457 44049 49204 56039 50784 50679 60658 49533 47025 61393 55510 59177 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15370000 3539 4211 3375 6522 5375 5375 1 9606 Homo sapiens -0.031524152133215466 DCIQYIK Unmodified 938.45315 0.45315295 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 6.5 0.5 1 1 48.03 48.113 2 0.020718 13103 20230619_1886_Aki_TMTPro18x_K_F6 104.21 12.309 180080 149740 168960 169450 155320 169820 183560 173120 197890 213170 212310 210600 228270 183530 184560 254240 240330 224770 166440 137260 172350 169590 163170 171830 183920 177740 201460 213170 217810 213070 230370 193960 191900 252490 229300 213850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 146660000 3540 1432 3376 6523;6524 5376;5377 5376 2 9606 Homo sapiens -0.018535502456074937 DCLASIAR Unmodified 904.44365 0.44365089 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 5.5 0.5 1 1 42.843 42.931 2 0.010397 10737 20230619_1885_Aki_TMTPro18x_K_F5 98.904 53.51 102980 79240 85976 93396 112610 117280 96581 90674 121840 96100 90373 86409 84500 73576 94680 87540 100780 89001 95056 72686 89176 93455 114470 116200 99059 94629 121420 96619 93946 87715 86949 77066 96388 87857 96282 84562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238090000 3541 307 3377 6525;6526 5378 5378 1 9606 Homo sapiens -0.012393185311339039 DCLHGIEAK Unmodified 1041.4913 0.49132937 2481 Q8N684-3;Q8N684;Q8N684-2;B4DGF8;F5H669 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 0 0 0 3.5 0.5 1 1 40.534 40.584 3 0.00059 9824 20230619_1883_Aki_TMTPro18x_K_F4 134.25 109.47 116180 106490 128900 117560 132000 157680 131850 130550 195990 122990 147670 137690 117850 126370 150220 115680 151660 147890 107610 97563 129870 118390 137040 155780 134920 135030 193800 125350 152450 138740 122970 130090 152070 118350 145060 140140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 329850000 3542 2481 3378 6527;6528 5379 5379 1 9606 Homo sapiens -0.02775664330943073 DCLINAAK Unmodified 903.4484 0.44840192 3470 P17987;E7ERF2;F5H136;F5H7Y1 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 6 0.816 1 1 1 46.438 46.521 2 0.0013285 11970 20230619_1887_Aki_TMTPro18x_K_F7 144.38 102.87 910030 710840 805670 859630 849760 1038400 882570 846110 1187300 1087700 1106800 962620 1188800 965820 872400 1316200 1274500 1135100 840440 652170 828180 858150 881660 1031900 897330 884120 1189100 1083300 1141400 984040 1195800 1014800 917290 1305600 1214600 1080600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1584699999.9999998 3543 3470 3379 6529;6530;6531 5380 5380 1 9606 Homo sapiens -0.007184343883636757 DCLNVLNK Unmodified 974.48552 0.48551571 4401 Q99471;H3BPF6;A0A7I2V5H9;Q99471-2 PFDN5 Prefoldin subunit 5 yes no 0 0 0 7.2 0.748 1 2 2 50.653 50.732 2;3 0.0021851 13931 20230619_1887_Aki_TMTPro18x_K_F7 141.39 83.894 344390 276820 301900 339800 313270 343010 343080 353050 377890 417350 405300 346730 403330 346960 356990 466520 479330 460460 318090 253980 310600 338050 325390 346880 345370 361640 384350 416130 414040 355540 409660 364290 371180 466180 457310 437480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 939830000 3544 4401 3380 6532;6533;6534;6535;6536 5381;5382 5381 2 9606 Homo sapiens -0.0027476284259364547 DCLPELK Unmodified 873.4266 0.42660385 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;O00429-7;H0YI79;A0A994J6A0;A0A994J3G1;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 0 4 0 1 50.329 50.361 2 0.032107 14159 20230619_1883_Aki_TMTPro18x_K_F4 98.299 40.74 116290 92387 109000 141770 132980 157500 156250 142700 181520 142680 139670 152220 169640 141500 110130 180850 187930 191190 107460 84980 111940 139190 136970 157640 156860 146860 181750 144600 146600 153770 169450 148430 117720 181450 179080 181470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118330000 3545 3212;3213 3381 6537 5383 5383 1 9606 Homo sapiens -0.015172391369333127 DCLQFIDQLSVPEEK Unmodified 1819.8662 0.86621522 4600 Q9NUY8-2;Q9NUY8;C9IZ32;C9JAM5 TBC1D23 TBC1 domain family member 23 yes no 0 0 0 4.5 0.5 1 1 62.751 62.778 3 0.044187 19511 20230619_1883_Aki_TMTPro18x_K_F4 45.14 27.858 16164 15349 17042 19425 16303 20447 21549 20625 22316 19302 20475 21947 26736 20917 19968 20064 25067 24948 14968 14078 17249 19293 17145 20594 21443 21029 22611 19664 21375 22120 26758 21582 20703 20452 23934 23644 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97109000 3546 4600 3382 6538;6539 5384 5384 1 9606 Homo sapiens -0.010923238901568766 DCLSIPYR Unmodified 1022.4855 0.48551571 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7 0.816 1 1 1 47.872 47.948 2 0.0018696 12622 20230619_1887_Aki_TMTPro18x_K_F7 135.77 98.673 351560 275590 314210 313540 305780 343320 372710 361600 423890 371260 246750 226690 366570 254920 227930 418290 402640 379970 324710 252690 322200 314070 320240 345380 373360 368310 422130 370430 266490 237920 363660 271060 244890 414900 383400 361380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 314160000 3547 3758 3383 6540;6541;6542 5385;5386 5386 2 9606 Homo sapiens -0.024827628425896364 DCPSGQLDAAGFQK Unmodified 1492.6616 0.66164217 509 A0A024R8B2;P62166-2;P62166 FREQ;NCS1 Neuronal calcium sensor 1 yes no 0 0 0 4 0 1 49.118 49.156 3 3.2892E-05 13612 20230619_1883_Aki_TMTPro18x_K_F4 96.707 74.834 133280 100730 114850 113180 113290 140900 127410 122330 174590 74113 78075 75786 89797 64874 96039 90348 85452 68164 123040 92365 118180 113670 118430 139910 129030 124990 171010 77754 85171 76586 91533 68639 96926 89171 81742 65041 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98087000 3548 509 3384 6543 5387 5387 1 9606 Homo sapiens -0.06498218190017724 DCQIAHGAAQFLR Unmodified 1485.7147 0.7146808 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 0 8 0 1 46.105 46.143 3 8.5699E-11 11927 20230619_1888_Aki_TMTPro18x_K_F8 170.79 151.18 80978 62624 79690 92893 75568 94848 86465 89707 100570 86533 89936 84387 100990 79730 90153 100050 94263 97648 74843 57585 81090 91298 79219 95579 87005 91926 101200 87591 93222 85668 102160 83504 92147 100050 90174 92759 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181380000 3549 2484 3385 6544 5388 5388 1 9606 Homo sapiens -0.008747956166871518 DCSSILSQDPNRVELVSSNTK Unmodified 2348.1278 0.12780265 4093 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 1 6 0 1 50.626 50.703 3 0.081696 14237 20230619_1886_Aki_TMTPro18x_K_F6 29.384 21.487 8203 6600.1 7125.7 4824.4 4283.1 5892.9 6193.2 5883.7 7466.5 12098 8750.1 8491.2 10018 8749 6022.3 11368 12846 13189 7576 6031 7272 5046.5 4739.1 5884.1 6178.2 6172.3 7610.5 11778 8964.8 8787.3 10003 9162.2 6600.2 11465 12228 12506 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42762000 3550 4093 3386 6545 5389 5389 1 9606 Homo sapiens 0.007663859481453983 DCTQAILLDGSYSK Unmodified 1569.7345 0.73447277 4522 Q9H6T3-3;Q9H6T3-2;Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes no 0 0 0 5.5 0.5 1 1 55.315 55.385 3 0.0011613 16209 20230619_1886_Aki_TMTPro18x_K_F6 78.191 60.391 53669 43270 53207 52112 44043 55864 55087 56159 61306 56024 60081 55538 60695 49578 61515 63330 61840 67329 49618 39692 53952 51968 46829 56196 55117 57346 62031 56618 61709 56238 61950 52086 62568 63635 59203 63887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78676000 3551 4522 3387 6546;6547 5390 5390 1 9606 Homo sapiens -0.02760509187214666 DCTRPVPR Unmodified 999.492 0.49199807 2089 A8K6A8;O75173;O75173-2 ADAMTS4 A disintegrin and metalloproteinase with thrombospondin motifs 4 yes no 0 0 1 5.5 0.5 1 1 24.71 24.761 3 0.011906 4484 20230619_1886_Aki_TMTPro18x_K_F6 71.501 34.808 11301 9465.8 13661 17804 20835 19691 15445 17688 23327 21355 38478 50166 31340 31833 35905 12973 39479 41835 10470 8729.6 13808 17297 20912 19719 16144 18319 23885 22254 38536 48906 32454 32440 36497 15036 37755 39420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8492800 3552 2089 3388 6548;6549 5391;5392 5392 2 9606 Homo sapiens -0.007768248912157105 DCTVEMPILK Unmodified 1204.5832 0.58318084 3668;3029 P56545;P56545-3;P56545-2;Q9NSY3;E7EUB3;X5D7T7;H0Y8U5;X5D8Y5;Q4KMQ8;Q13363-2;Q13363;D6RAX2;E7ESU7;E9PGB1 CTBP2;DKFZp434B0914;CTBP1 C-terminal-binding protein 2;C-terminal-binding protein 1 no no 0 0 0 5.5 0.5 2 2 56.818 56.884 2;3 2.1245E-05 16814 20230619_1886_Aki_TMTPro18x_K_F6 182.76 139.06 157150 123610 132760 144110 136800 117130 166600 154330 150230 169980 175480 158330 178320 141190 147660 187360 168370 163250 145090 113360 136990 143570 142280 121470 165750 155570 155070 170500 178850 160780 180370 148680 152050 186080 160860 155330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 207090000 3553 3668;3029 3389 6550;6551;6552;6553 5393;5394 5394 2 9606 Homo sapiens -0.010927420287771383 DCVGPEVEK Unmodified 1031.4594 0.45936054 3374 V9HWF4;P00558;P00558-2 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 2 0.816 1 1 1 42.338 42.41 3 0.00024632 10651 20230619_1882_Aki_TMTPro18x_K_F3 107.21 74.313 310220 195100 303890 342310 321680 333560 320280 331290 404200 380650 485830 504330 464160 408590 384740 443360 572030 508750 286390 179960 309680 333230 332660 337770 325760 340040 410070 385830 493650 503090 470880 426410 403240 448490 545070 482750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 936510000 3554 3374 3390 6554;6555;6556 5395;5396;5397 5397 3 9606 Homo sapiens -0.055110768047370584 DCVSPSEYTAACSR Unmodified 1601.645 0.64500583 2943 E9PQR7;Q548N1;Q9UK41;Q9UK41-2 VPS28 Vacuolar protein sorting-associated protein 28 homolog yes no 0 0 0 3 0 1 40.657 40.716 2 1.1977E-16 9907 20230619_1882_Aki_TMTPro18x_K_F3 265 254.71 23040 15168 19372 21432 22866 23494 22403 21686 29618 29620 27739 24063 25866 22821 19216 34298 31232 32519 21251 13950 20045 21149 23470 23560 22835 22489 29701 29348 28428 24661 26164 24190 20405 34131 29775 30901 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31053000 3555 2943 3391 6557 5398 5398 1 9606 Homo sapiens -0.13175087138210984 DCYPAVQK Unmodified 979.44332 0.44331654 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9;J3QKQ5 KPNB1 Importin subunit beta-1 yes no 0 0 0 5 0 1 42.319 42.402 2 0.0018076 10489 20230619_1885_Aki_TMTPro18x_K_F5 151.29 118.17 142780 84438 134260 136120 154330 161750 147850 156300 188450 149280 173260 157920 186100 150180 147150 115380 216330 178530 131740 77820 137390 133500 158560 161430 150730 159820 188970 151600 178880 159620 187680 153480 153920 120160 206060 169040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157180000 3556 3904 3392 6558 5399 5399 1 9606 Homo sapiens -0.0472273825097318 DDAMLLK Oxidation (M) 820.40005 0.40005474 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6;B7Z532 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 1 0 3.5 0.5 1 1 46.251 46.312 2 0.039707 12281 20230619_1883_Aki_TMTPro18x_K_F4 85.265 47.027 1284900 981350 1093300 1446900 1580600 1633100 1589400 1572400 2243600 1590100 1874600 2049800 2006000 1697900 1475200 2170600 2246700 2227400 1186200 902370 1136100 1424300 1604200 1635500 1621100 1611300 2231600 1621400 1946700 2048700 2018900 1787800 1555800 2174700 2142100 2115000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1094400000 3557 272 3393 6559;6560 5400;5401 5401 163 2 9606 Homo sapiens -0.017329280282410764 DDAMLLK Unmodified 804.40514 0.40514012 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6;B7Z532 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 3.4 1.02 1 2 1 1 51.24 51.288 2;3 0.023523 14569 20230619_1883_Aki_TMTPro18x_K_F4 105.12 55.077 1513300 1154500 1272900 1585200 1401400 1889800 1700300 1652500 2312600 2038100 1998300 2389700 2455800 2117500 1669200 2880700 2347300 2688700 1396900 1060700 1317500 1568500 1457800 1881100 1715100 1715100 2308500 2050900 2086600 2400800 2455600 2232900 1755500 2868000 2241600 2554500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1706399999.9999998 3558 272 3393 6561;6562;6563;6564;6565 5402;5403;5404 5403 3 9606 Homo sapiens -0.004886241656322454 DDANNDPQWSEEQLIAAK Unmodified 2042.9181 0.91812745 3489 P22234;P22234-2;E9PBS1;B4DGX3;D6RF62 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 2.6 1.02 1 1 2 1 57.263 57.28 3;4 6.9533E-24 17477 20230619_1881_Aki_TMTPro18x_K_F2 203.59 192.29 154480 121900 135060 143640 109620 145490 135840 146560 174970 184110 171130 233660 249740 243610 147640 304390 279650 343590 142660 111810 138500 143330 116890 146970 136730 150670 176050 185600 179500 235290 247920 254080 160100 306570 266730 325690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1558499999.9999998 3559 3489 3394 6566;6567;6568;6569;6570 5405;5406;5407 5406 3 9606 Homo sapiens -0.061614889426664377 DDASMPLPFDLTDIVSELR Unmodified 2133.03 0.029986085 1260 A0A1B0GVH5;A0A1B0GTC3;B3KU60;Q9C0B1;B4DHN4;A0A1B0GUY7;Q9C0B1-4;Q9C0B1-2;Q9C0B1-3 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes no 0 0 0 5 0 1 67.689 67.731 3 3.5281E-10 21279 20230619_1885_Aki_TMTPro18x_K_F5 124.18 111.87 2411.3 3144.3 3968.1 3876 4697 3294.1 6831.6 3986 5832.6 4095 3616.2 2907.9 4116 2204.5 5300.2 2855.8 3284.9 4478.9 2249.8 2880.7 3912.7 3848.3 4853.4 3396.8 6722.1 4035.7 5905 4099.5 3836.6 2982.1 4230.9 2342.3 5244.2 2956.8 3170.7 4232.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11062000 3560 1260 3395 6571 5408 5408 1 9606 Homo sapiens 0.008792290901510569 DDAYWPEAK Unmodified 1093.4716 0.47163978 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959;K7EII0 SAFB Scaffold attachment factor B1 yes no 0 0 0 3.5 0.5 1 1 51.311 51.36 2 0.00056111 14753 20230619_1882_Aki_TMTPro18x_K_F3 131.44 90.41 199720 183080 191370 200580 205260 251600 229680 233520 263300 267660 266640 265180 303380 233150 230980 283720 289330 288590 184750 167710 195410 201860 213000 250120 231220 240650 266580 268600 274940 268240 304890 244380 239650 284420 276260 274060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117640000 3561 2020 3396 6572;6573 5409;5410 5409 2 9606 Homo sapiens -0.071357170700594 DDCELMLQSR Unmodified 1265.538 0.53802156 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;B4DL23;E5RIH6;E5RFU8;E5RJT5 CEP170 Centrosomal protein of 170 kDa yes no 0 0 0 2 0 1 45.892 45.974 2 0.00771 12574 20230619_1881_Aki_TMTPro18x_K_F2 84.17 73.647 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3562 1960 3397 6574 5411 5411 1 9606 Homo sapiens -0.08412592561967358 DDDIAALVVDNGSGMCK Acetyl (Protein N-term) 1820.7921 0.792064 3679 P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;A0A2R8YGF8;A0A6Q8PH58;G5E9R0;C9JZR7;C9JUM1;C9JTX5;A0A6Q8PGD7 ACTB;PS1TP5BP1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 1 0 0 2.5 1.12 1 1 1 1 64.373 64.385 2 5.5128E-30 20273 20230619_1882_Aki_TMTPro18x_K_F3 176.8 164.94 1077200 836220 956650 1097000 930680 1324400 1171600 1224800 1233200 1477500 1251200 1304800 1625800 1281600 1154600 1435300 1309400 1429000 994780 767850 982760 1089100 977750 1318700 1169400 1264400 1255500 1474100 1299300 1331100 1624300 1331600 1192500 1438800 1252200 1356900 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3536799999.9999995 3563 3679 3398 6575;6576;6577;6578 5412;5413;5414;5415;5416 5415 5 9606 Homo sapiens -0.08550035043958815 DDDIAALVVDNGSGMCK Acetyl (Protein N-term);Oxidation (M) 1836.787 0.78697862 3679 P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;A0A2R8YGF8;A0A6Q8PH58;G5E9R0;C9JZR7;C9JUM1;C9JTX5;A0A6Q8PGD7 ACTB;PS1TP5BP1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 1 1 0 2.33 1.25 1 1 1 63.195 63.203 3 5.3749E-10 20049 20230619_1881_Aki_TMTPro18x_K_F2 64.407 59.706 293660 243440 282510 285080 385360 356270 312660 370550 354250 401920 323930 366710 414230 311500 357900 384570 363370 413800 271470 223220 289350 285530 389710 355400 320920 378080 358010 403250 338040 371750 416940 327310 365380 386830 347960 392540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 873120000 3564 3679 3398 6579;6580;6581 5417;5418 5418 2373 2 9606 Homo sapiens -0.09794338906567646 DDDIEEGDLPEHK Unmodified 1510.6423 0.64234652 3899 Q14696 MESDC2 LDLR chaperone MESD yes yes 0 0 0 1 0 1 43.681 43.681 3 6.89E-05 11751 20230619_1880_Aki_TMTPro18x_K_F1 107.99 97.207 44510 32713 45099 44744 45699 73567 51223 52049 77246 56039 65177 90597 75049 75193 63838 79360 109770 122670 41136 30059 45803 44548 47800 71630 52121 54762 76665 57542 68030 89813 75896 78287 67731 82043 104670 116010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140760000 3565 3899 3399 6582 5419 5419 1 9606 Homo sapiens -0.09254895999902146 DDDRYEQASDVR Unmodified 1467.6226 0.62261413 1041 A0A8I5KRH3;A0A0G2JRY5;O00268 TAF4 Transcription initiation factor TFIID subunit 4 yes no 0 0 1 1 0 1 32.372 32.372 3 0.032249 6946 20230619_1880_Aki_TMTPro18x_K_F1 56.938 36.275 15321 10411 18603 18814 18789 24773 23566 23837 26269 19097 26959 30541 23567 23033 19394 19438 30247 31389 14177 9604 18639 18376 19651 24548 23568 24290 26592 19910 27497 30214 23993 23813 20393 20262 28843 29683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28287000 3566 1041 3400 6583 5420 5420 1 9606 Homo sapiens -0.0924922722001611 DDDVPLMWR Oxidation (M) 1161.5125 0.51245874 3250 O43252;Q05BW9;Q4W5H3 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 1 0 2 0 1 51.874 51.913 2 0.036942 15289 20230619_1881_Aki_TMTPro18x_K_F2 67.494 43.158 88426 76322 82225 84109 112860 141540 94101 105750 140180 83360 87185 82416 97125 70230 81451 110660 91697 95167 81746 69935 84530 85047 114550 137900 97370 109830 137940 85564 92321 83411 98020 75019 83832 109590 87660 90541 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63278000 3567 3250 3401 6584 5421 5421 1917 1 9606 Homo sapiens -0.061836990220854204 DDDVPLMWR Unmodified 1145.5175 0.51754412 3250 O43252;Q05BW9;Q4W5H3 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 2.5 0.5 1 1 57.28 57.313 2 1.7623E-10 17538 20230619_1881_Aki_TMTPro18x_K_F2 164.72 149.46 79599 64512 78308 73755 72178 103680 82414 76691 89704 115580 101420 106950 111740 99006 100690 128520 117860 125550 73589 59147 79565 74124 75926 101910 82751 81236 91594 114460 104000 108670 113230 103940 103690 128430 112660 119250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59511000 3568 3250 3401 6585;6586 5422;5423 5422 2 9606 Homo sapiens -0.04939395159453852 DDDYRGGGDRYEDR Unmodified 1687.6823 0.68225427 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;F8VX11;F8VP89 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 2 1 0 1 29.057 29.057 4 5.0509E-07 5626 20230619_1880_Aki_TMTPro18x_K_F1 140.03 120.28 34728 30967 32732 29230 35108 33590 31299 33610 37646 43114 42222 38736 43810 35947 41896 50637 50916 40825 32115 28336 33418 29756 36151 33675 31999 34571 38217 42921 43152 39456 44572 37944 43178 50076 48559 38917 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46185000 3569 2578 3402 6587 5424 5424 1 9606 Homo sapiens -0.1340795627661464 DDEEMNTWIQAISSAISSDK Unmodified 2238.9951 0.99505714 2337 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 6 0.816 1 1 1 67.118 67.154 3 3.6798E-11 21207 20230619_1886_Aki_TMTPro18x_K_F6 104.03 95.636 1062.4 2239.7 2959.3 1640 1767.4 1276 2484.1 1919.8 3090.4 2578.8 3818.2 4401.6 2775.8 4455.3 2690.2 5244.9 5012.1 6388.6 1006.6 2041.7 2822 1707.2 1939.2 1337.8 2483.2 1937.2 3137.3 2628.2 3841 4390.6 2879.5 4626.4 2880.2 5313.2 4782.7 6050.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10086000 3570 2337 3403 6588;6589;6590 5425 5425 1 9606 Homo sapiens -0.07488058508442919 DDEFTHLYTLIVRPDNTYEVK Unmodified 2567.2544 0.25438337 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;B4DHR1;K7EJB9;B4E2Y9 CALR;HEL-S-99n Calreticulin yes no 0 0 1 5.5 0.5 1 1 62.167 62.217 4 1.0864999999999999E-36 19086 20230619_1886_Aki_TMTPro18x_K_F6 230.71 211.4 120200 57510 73609 108280 55455 117590 69085 98026 174730 132160 130480 301950 203650 249470 96271 365000 304050 525660 110500 53184 78631 105140 60223 117520 72157 102450 170200 137030 140130 296840 201270 264960 112830 372910 290440 496760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 442420000 3571 1691 3404 6591;6592 5426 5426 1 9606 Homo sapiens 0.03344635444955202 DDESNLVEEK Unmodified 1176.5146 0.51462681 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5;G3V2P7 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 0 1 0 1 44.704 44.704 3 0.00052234 12177 20230619_1880_Aki_TMTPro18x_K_F1 100.88 63.534 33675 26317 34914 33829 39906 45537 41155 45237 52580 41091 44036 56104 55522 60160 44069 51773 68509 67226 31139 24159 35437 33705 41113 45139 41779 46105 52557 42242 46160 56381 55880 61435 46400 53011 65304 63693 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39614000 3572 3808 3405 6593 5427 5427 1 9606 Homo sapiens -0.06656991803265555 DDETMYVESK Oxidation (M) 1231.4914 0.49144853 3234 Q53R19;O15144;A0A024R408;Q9BXV5 ARPC2 Actin-related protein 2/3 complex subunit 2 yes no 0 1 0 1.5 0.5 1 1 43.057 43.098 3 0.00042875 11469 20230619_1880_Aki_TMTPro18x_K_F1 98.943 86.966 38777 30056 40848 46709 53758 61968 50183 51631 63594 43221 60785 60253 62390 47741 48800 49452 54413 56055 35860 27653 41558 45963 54756 61232 51216 53236 63829 44692 62542 59986 62939 49769 50175 50043 52019 53165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65001000 3573 3234 3406 6594;6595 5428 5428 1906 1 9606 Homo sapiens -0.11503753912279535 DDEVQVVR Unmodified 958.47197 0.47197413 3695 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;A0A024RBF6 RPL26;RPL26L1;hCG_26523 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 0 1 0 1 37.422 37.422 2 0.00065724 8932 20230619_1880_Aki_TMTPro18x_K_F1 159.04 109.68 383040 232020 317420 359630 398840 451540 393810 420910 575170 438600 473220 522570 562510 500320 372530 423720 688520 645510 353110 213700 329400 353690 408300 448690 402870 432470 571300 445270 494260 525590 562780 513030 399800 439300 655420 610910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1140800000 3574 3695 3407 6596 5429 5429 1 9606 Homo sapiens -0.008922973501739762 DDEYDYLFK Unmodified 1206.5081 0.50808487 369;3946 H3BSC1;A0A024R5Z8;P62491;H3BMH2;P62491-2;Q15907-2;B4DMN1;B4DQU5;Q15907 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B no no 0 0 0 3 0 1 60.799 60.828 3 0.003592 18771 20230619_1882_Aki_TMTPro18x_K_F3 80.239 67.258 19102 11209 15035 16839 14890 19842 15936 16049 21900 23070 24000 22681 22037 19904 21959 23970 21353 22254 17601 10322 15622 16571 15555 19735 16196 16845 22061 22932 24429 22950 22554 20831 22310 23923 20443 21152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8459300 3575 369;3946 3408 6597 5430 5430 1 9606 Homo sapiens -0.08690884964016732 DDFNSGFR Unmodified 956.39881 0.39880919 3913 Q15056;A0A7I2V4E4;A0A7I2V3E4 EIF4H Eukaryotic translation initiation factor 4H yes no 0 0 0 2.5 0.5 1 1 42.799 42.873 2 0.0011758 11147 20230619_1881_Aki_TMTPro18x_K_F2 147.29 109.05 208590 132300 207880 236770 236980 292130 247270 281070 286330 240050 301790 311320 284130 258100 257660 271500 345510 332740 192600 122070 211900 231050 244400 290660 250030 286710 289870 247000 308180 311040 289480 268670 267380 276010 329650 315440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138080000 3576 3913 3409 6598;6599 5431;5432 5431 2 9606 Homo sapiens -0.08113426072804941 DDFTEFGK Unmodified 957.40798 0.40797689 355 A0A024R5S5;O75822;O75822-3;H0YGJ7;H0YLP3 EIF3S1;EIF3J Eukaryotic translation initiation factor 3 subunit J yes no 0 0 0 2 0.816 1 1 1 53.095 53.141 2 0.0013614 15537 20230619_1882_Aki_TMTPro18x_K_F3 143.85 99.716 609940 483460 597840 694370 599130 683700 698900 647220 854350 809940 899630 875150 907240 840180 812960 945870 905770 976200 563790 444340 608990 683440 625280 691140 703640 668410 863140 812120 920970 884530 921700 873130 834230 950180 866230 926620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1034899999.9999999 3577 355 3410 6600;6601;6602 5433;5434;5435 5435 3 9606 Homo sapiens -0.07243077507132512 DDGISFSNQTGPAWAGSER Unmodified 1993.8766 0.87659699 2657 Q6IBR8;B5BU01;P20042;Q96I16 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 3.5 0.5 1 1 53.761 53.797 3 4.0767E-05 15878 20230619_1882_Aki_TMTPro18x_K_F3 90.581 81.873 62968 49490 58643 68511 61378 68080 67991 63279 77867 73246 73227 70748 81370 71250 70292 87864 81930 82246 58178 45469 60034 67591 63735 68755 68467 65273 78591 73444 75685 71991 82290 74347 72412 87664 78279 78176 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67200000 3578 2657 3411 6603;6604 5436;5437 5436 2 9606 Homo sapiens -0.08058624911313927 DDGLFSGDPNWFPK Unmodified 1593.71 0.70997257 1438 A0A384MTL2;P37802;P37802-2;X6RJP6 TAGLN2 Transgelin-2 yes no 0 0 0 5.6 1.02 1 1 2 1 63.389 63.425 2;3 1.0126E-08 19751 20230619_1883_Aki_TMTPro18x_K_F4 154.28 134.96 508060 420900 511990 512970 357930 488030 588750 584400 639920 686000 582810 583100 778310 544980 529610 745780 630570 695410 469860 386100 517670 510400 390820 497400 581880 592990 647210 684530 608990 595430 775580 574650 549700 742700 602800 660800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3818699999.9999995 3579 1438 3412 6605;6606;6607;6608;6609 5438;5439;5440 5438 3 9606 Homo sapiens -0.0631340127843032 DDGLFSGDPNWFPKK Unmodified 1721.8049 0.80493559 1438 A0A384MTL2;P37802;P37802-2;X6RJP6 TAGLN2 Transgelin-2 yes no 0 0 1 8 0 1 61.169 61.201 3 0.00027619 18275 20230619_1888_Aki_TMTPro18x_K_F8 92.063 82.657 144910 203410 208650 176270 179040 116500 204730 222840 136730 190500 161520 95781 117310 68456 204150 92914 68716 36961 135080 185770 205920 179870 187960 125190 203060 219340 144390 191030 162400 100690 124840 72953 197980 90246 66836 35816 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90430000 3580 1438 3413 6610 5441 5441 1 9606 Homo sapiens -0.027094678072444367 DDGSAVIWVTFK Unmodified 1336.6663 0.66631685 1447 Q14019;A0A384MTY2 COTL1 Coactosin-like protein yes no 0 0 0 7.33 0.471 2 1 63.115 63.144 2;3 1.4191E-05 19270 20230619_1887_Aki_TMTPro18x_K_F7 117.09 93.415 67685 51694 59100 54611 68835 68791 86567 82116 106180 89384 76326 101220 96468 88019 93357 102750 111420 132720 62495 47372 60881 55159 71186 68826 86796 83141 105870 90327 80790 101680 97753 92030 96038 104650 106570 125660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206200000 3581 1447 3414 6611;6612;6613 5442;5443 5442 2 9606 Homo sapiens 0.011450340150759075 DDGSTLMEIDGDK Unmodified 1394.5871 0.58713983 3368 Q6FI97;Q53FS0;O96019;O96019-2;H7C5S0;C9JQT2 BAF53A;ACTL6A Actin-like protein 6A yes no 0 0 0 1.5 0.5 1 1 53.626 53.64 3 8.1819E-11 15839 20230619_1880_Aki_TMTPro18x_K_F1 142.83 128.41 117630 93797 112290 124050 122040 166190 137050 127000 177470 145360 140980 154660 165570 145100 136330 157270 172890 172540 108710 86127 114780 123280 126720 163850 138500 132960 177010 146340 147510 156210 166900 150640 141270 158650 165060 163710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133380000 3582 3368 3415 6614;6615 5444;5445 5444 2 9606 Homo sapiens -0.09437025792021814 DDGSWEVIEGYR Unmodified 1424.6208 0.62082322 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;A0A804HJD7;A0A804HKE0;P49448;A0A140VK14;A0A804HJZ0;A0A804HHS2;A0A804HIA0;A0A804HHU3;A0A804HLC0 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 1.5 0.5 1 1 56.318 56.327 2 1.4395E-17 17103 20230619_1881_Aki_TMTPro18x_K_F2 231.38 203.55 243510 217380 230400 236540 247060 295910 305740 301010 322720 315670 317120 343000 330650 302620 359800 345880 339520 353710 225200 199150 235510 238210 257050 294830 305350 307480 327610 319050 326540 345530 338540 315680 364160 347400 325150 335820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 163690000 3583 2542 3416 6616;6617 5446;5447 5447 2 9606 Homo sapiens -0.07450236237946228 DDGTGQLLLPLSDAR Unmodified 1569.7999 0.79985021 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0;Q96IE3 PLEC;PLEC1 Plectin yes no 0 0 0 4 0 1 59.488 59.491 2 0.0018789 18116 20230619_1883_Aki_TMTPro18x_K_F4 101.53 77.546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3584 3921 3417 6618 5448 5448 1 9606 Homo sapiens 0.03774228330144069 DDGTVIHFNNPK Unmodified 1355.647 0.64697839 4127 Q6PJ77;Q96K17-2;Q96K17;E9PL10 BTF3L4 Transcription factor BTF3;Transcription factor BTF3 homolog 4 yes no 0 0 0 4.5 0.5 1 1 45.246 45.307 3 4.2197E-06 11771 20230619_1885_Aki_TMTPro18x_K_F5 141.71 118.11 159820 116920 115100 149750 141170 178290 134290 140100 222480 170440 186390 261540 267100 267170 148700 365340 319160 403080 147340 107360 121260 148810 144870 177180 138480 146630 220150 173640 196790 261700 264930 280410 163930 366920 304300 382140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 640600000 3585 4127 3418 6619;6620 5449 5449 1 9606 Homo sapiens -0.016619222757981333 DDIAQVDYVEPSQNTISLK Unmodified 2134.043 0.042993612 2503 B4DJK4;B4E0Q4;B4DZJ7;O00267-2;O00267 SUPT5H Transcription elongation factor SPT5 yes no 0 0 0 4 0 1 59.5 59.503 3 2.7973E-08 18121 20230619_1883_Aki_TMTPro18x_K_F4 114.34 89.798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3586 2503 3419 6621 5450 5450 1 9606 Homo sapiens 0.02133383473892536 DDIENMVK Oxidation (M) 978.43281 0.43281144 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;A1XP52;H0Y8S0 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 1 0 2 0 1 42.491 42.571 2 0.024187 10984 20230619_1881_Aki_TMTPro18x_K_F2 78.516 50.307 56175 32053 45637 56234 48376 66966 59532 59416 83354 66754 81135 104800 84998 83335 60704 112630 122190 150720 51764 29580 47365 54885 50508 66651 60096 61437 83398 68265 83635 103930 85632 88204 65846 114650 116510 142650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74281000 3587 1488 3420 6622 5451 5451 993 1 9606 Homo sapiens -0.05726765696056191 DDIENMVK Unmodified 962.4379 0.43789681 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;A1XP52;H0Y8S0 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 2.5 0.5 2 2 50.254 50.318 2;3 0.0027761 14591 20230619_1881_Aki_TMTPro18x_K_F2 137.42 73.751 374960 268160 319940 356930 310320 453830 381590 377330 614660 481560 509420 683260 690100 611460 413930 898350 807510 992380 346020 246360 329820 354290 326490 449450 387650 393620 608470 487710 536270 682230 686200 648170 450240 901700 770090 940900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 752510000 3588 1488 3420 6623;6624;6625;6626 5452;5453 5452 2 9606 Homo sapiens -0.0448246183344736 DDIIENAPTTHTEEYSGEEK Unmodified 2276.9921 0.99208025 3222 O14744;O14744-2;B2RDD7;O14744-5;O14744-3;G3V580;G3V5L5;B4DV00;G3V2X6;H0YJX6 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed;Protein arginine N-methyltransferase 5 yes no 0 0 0 1 0 1 46.059 46.059 3 6.2311E-07 12726 20230619_1880_Aki_TMTPro18x_K_F1 104.03 98.934 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3589 3222 3421 6627 5454 5454 1 9606 Homo sapiens -0.09533610361631872 DDIPVFLR Unmodified 973.52328 0.52328142 4650 Q9UBB4;A0A1W2PQD2;Q9UBB4-2;Q7Z524;B1AHE4 ATXN10 Ataxin-10 yes no 0 0 0 4.5 0.5 1 1 58.053 58.083 2 0.0023222 17515 20230619_1883_Aki_TMTPro18x_K_F4 128.57 91.806 230770 177840 200670 219550 166710 242690 206130 214240 300450 262270 253680 315760 361130 297580 227840 404370 364120 424890 213070 163200 206010 218580 177640 242860 208500 222150 298890 264280 267430 317550 358940 313260 242540 405190 347490 403120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259940000 3590 4650 3422 6628;6629 5455;5456 5455 2 9606 Homo sapiens 0.03546071414518792 DDKEEEEDGTGSPQLNNR Unmodified 2031.8617 0.86173478 2004 P49407;P49407-2;A8K103 ARRB1 Beta-arrestin-1 yes no 0 0 1 1 0 1 36.836 36.836 3 5.8410000000000005E-24 8728 20230619_1880_Aki_TMTPro18x_K_F1 209.31 162.99 21867 15777 17884 16628 17738 24195 17227 22042 34656 27864 32544 52384 49577 49857 22884 77145 74856 107880 20174 14461 18491 16833 18509 23835 17948 22812 34225 28622 34326 52012 48917 52957 26919 78597 71348 102020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19464000 3591 2004 3423 6630 5457 5457 1 9606 Homo sapiens -0.11292161569986092 DDLDEEEDTHL Unmodified 1329.5208 0.5208344 2706 Q96N83;B7ZKQ8;O00592-2;O00592 PODXL Podocalyxin yes no 0 0 0 1 0 1 46.05 46.05 2 0.00018482 12749 20230619_1880_Aki_TMTPro18x_K_F1 130.56 130.56 11762 10390 9627.7 10642 8375.7 10212 9274.3 10999 15217 15012 15344 17855 16549 14746 11792 20420 20092 21670 10865 9514 9944.4 10728 8848.9 10382 9489.2 11287 15173 15043 15797 17891 16640 15611 12581 20470 19155 20563 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13798000 3592 2706 3424 6631 5458 5458 1 9606 Homo sapiens -0.1307451836241853 DDLNSQLQESLR Unmodified 1416.6845 0.68448611 835 Q4V328-4;A0A994J436;A0A994J4V9;A0A994J6P1;A0A087WXA6;A0A994J489;A0A994J4J8;A0A994J472;A0A994J4U4;A0A994J4F7;A0A994J6V9;A8K7Z3;A0A994J7B3;A0A994J484;A0A994J6U6;A0A994J720;A0A994J4V2;A0A994J488;A0A994J783;Q4V328;A0A087WW92;A0A994J745;A0A994J4N3;A0A994J4H0;A0A994J6Q0;A0A994J4B5;A0A994J4E1;A0A087WT45;A0A994J7A3;A0A994J6M6;A0A994J463;A0A994J3X9;A0A994J772;A0A994J724;A0A994J4H5;A0A994J467;A0A994J4M4;A0A994J4D1;A0A994J4A2;A0A994J446;A0A994J447;Q4V328-2;A0A994J6X0;A0A994J6S6 GRIPAP1 GRIP1-associated protein 1 yes no 0 0 0 3 0 1 49.965 50.04 2 2.3988E-08 14141 20230619_1882_Aki_TMTPro18x_K_F3 155.99 121.6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3593 835 3425 6632 5459 5459 1 9606 Homo sapiens -0.0071887580083966895 DDLRDMFCK Unmodified 1198.5111 0.51107853 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;Q92973-3;S4R398 TNPO1 Transportin-1 yes no 0 0 1 5.5 0.5 1 1 53.114 53.188 3 0.0012692 15251 20230619_1886_Aki_TMTPro18x_K_F6 98.257 78.934 131650 113950 125720 109800 102430 108330 105640 116250 121350 141050 105920 91174 142860 109060 87127 188660 167370 144570 121730 104300 127720 111350 108330 109950 106930 118820 122340 139690 110850 95619 142010 116160 94559 185490 159210 137860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130950000 3594 629 3426 6633;6634 5460 5460 1 9606 Homo sapiens -0.08023656382488298 DDLSGADIK Unmodified 932.44509 0.44509068 3706 Q53XL8;Q53HB3;P62191;P62191-2 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 1.5 0.5 1 1 46.018 46.057 2 0.0018323 12623 20230619_1881_Aki_TMTPro18x_K_F2 112.11 64.91 350290 242150 292810 351460 383150 407850 378620 372620 593870 395080 467980 451440 476900 365850 382190 409800 486440 483060 323150 222710 303930 346480 391150 407250 388420 383750 587070 400260 486130 452870 481810 382810 396190 415130 464390 458050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 247700000 3595 3706 3427 6635;6636 5461;5462 5461 2 9606 Homo sapiens -0.02383405961381868 DDLVTVK Unmodified 788.42798 0.42798405 390 A0A024R6C9;P36957;Q6IBS5;Q86SW4;B7Z6J1;H0YJF9;G3V3F0 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes no 0 0 0 3.5 0.5 1 1 47.031 47.092 2 0.018139 12652 20230619_1883_Aki_TMTPro18x_K_F4 112.17 20.265 339400 255860 316160 369270 452680 452800 435840 409760 616280 399860 514910 500910 523100 471690 415480 487510 703740 517200 313500 235220 325460 364480 458940 450530 445680 421410 612740 408300 533130 503160 529080 488200 440580 491170 669250 491600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 316660000 3596 390 3428 6637;6638 5463 5463 1 9606 Homo sapiens 0.025307182234769243 DDNGVPFVR Unmodified 1017.488 0.48795855 26 A0A024QZ64;P09972;B7Z1Y2;B7Z3K9;B7Z1N6;A8MVZ9;C9J8F3;J3KSV6;J3QKP5;J3QKK1;B7Z1H6;K7EKH5 ALDOC Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C yes no 0 0 0 3 0 1 45.546 45.621 2 0.0083522 12115 20230619_1882_Aki_TMTPro18x_K_F3 88.136 55.526 98856 78616 90069 80902 83677 91081 101650 106230 114880 125290 146810 146490 136340 126260 130670 160210 149780 152540 91326 72016 92077 81745 87921 91719 101910 107950 117550 126200 148670 147130 139290 132630 134200 159930 143140 144950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59240000 3597 26 3429 6639 5464 5464 1 9606 Homo sapiens -0.020085911132809997 DDNMFQIGK Oxidation (M) 1082.4703 0.47025958 3649 Q6IBA2;Q59G24;P53999;B7Z1Z0;Q6E433 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes no 0 1 0 3.29 1.03 2 2 2 1 48.004 48.069 2;3 0.0035386 13049 20230619_1883_Aki_TMTPro18x_K_F4 94.85 72.11 403520 314260 373390 402500 408010 441750 428560 403420 514550 494270 532370 539650 580650 463030 454290 637680 586890 618640 372780 288500 382500 399690 421730 442870 433560 417330 520070 496140 547380 543430 584990 489480 472530 636340 560470 587680 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1763799999.9999998 3598 3649 3430 6640;6641;6642;6643;6644;6645;6646 5465;5466 5466 2339 2 9606 Homo sapiens -0.06767674430443549 DDNMFQIGK Unmodified 1066.4753 0.47534495 3649 Q6IBA2;Q59G24;P53999;B7Z1Z0;Q6E433 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes no 0 0 0 4.5 0.5 1 1 54.216 54.286 2 7.1705E-07 15903 20230619_1883_Aki_TMTPro18x_K_F4 168.26 110.67 426010 315180 375950 414730 341580 469950 471110 448920 501450 528870 526950 539280 604810 466560 462630 629670 548890 570850 393300 289470 385970 411300 361800 470230 468410 462230 510330 530470 542820 544650 607750 492430 478630 626340 524490 542740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 660630000 3599 3649 3430 6647;6648 5467;5468;5469 5467 3 9606 Homo sapiens -0.05523370567834718 DDPHACYSTVFDK Unmodified 1553.6457 0.64565776 2776 CON__P02769 yes yes 0 0 0 4 1.41 1 1 1 1 1 47.511 47.581 3 2.8306E-05 12854 20230619_1883_Aki_TMTPro18x_K_F4 116.63 106.71 + 294210 760910 880840 354990 2539800 3252200 1428000 1382900 2489300 699550 622640 1007200 452340 640090 676070 720910 1029500 1873800 280210 691960 868630 429920 2481300 3024900 1534200 1520700 2397200 758510 721900 994950 481110 677330 703590 786820 987480 1764400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1797899999.9999998 3600 2776 3431 6649;6650;6651;6652;6653 5470 5470 1 9606 Homo sapiens -0.10901924426912046 DDPLTNLNTAFDVAEK Unmodified 1761.8421 0.84210896 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;G3V2N5;A0A804HJQ9;G3V2W4;B4DRP5;A0A804HJN7 ACTN1 Alpha-actinin-1 yes no 0 0 0 4 0.816 1 1 1 62.886 62.914 3 5.4345E-06 19262 20230619_1885_Aki_TMTPro18x_K_F5 111.43 97.176 91786 77423 80054 57766 62840 96191 81586 90529 95012 132800 103960 94364 106610 107890 91719 113040 124620 110020 84799 70744 81936 60604 67398 94236 81650 93874 96596 130740 106280 97959 108170 111090 95454 113300 118820 104580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 928700000 3601 387 3432 6654;6655;6656 5471;5472 5472 2 9606 Homo sapiens -0.008338410521673723 DDPSSFR Unmodified 822.3508 0.35079637 2974 F5H365;Q15436;B4DSQ5;B4DF60;Q15436-2 SEC23A Protein transport protein Sec23A yes no 0 0 0 1.5 0.5 1 1 35.561 35.589 2 0.017891 8234 20230619_1880_Aki_TMTPro18x_K_F1 108 90.011 45433 25826 42397 47746 50852 64924 48150 58846 75305 58530 63081 76722 75506 66402 53739 41883 85665 83136 41908 23853 43489 46595 52211 64140 49556 60490 74657 59762 65897 76594 75681 67589 56712 44838 81637 78535 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123490000 3602 2974 3433 6657;6658 5473 5473 1 9606 Homo sapiens -0.06748499992841062 DDPSTIEK Unmodified 903.41854 0.41854158 614 A0A024RAA5;P60953;B4E1U9;P60953-1;A0A8Q3WLC5;B7ZAY4;B4DMH5;A0A024R9T1;A0A024RAE6;A0A590UJK8;A0A8Q3SI43;Q5JYX0;Q9UJM1 CDC42;hCG_39634 Cell division control protein 42 homolog yes no 0 0 0 1.5 0.5 1 1 40.601 40.637 2 0.0019506 10120 20230619_1881_Aki_TMTPro18x_K_F2 134.48 71.82 92971 51027 117320 128880 151740 183070 122950 152250 158600 95250 156990 214040 135720 141050 155980 64849 155410 177760 85977 47395 117750 124260 154240 180070 126830 156110 159210 103000 160640 209080 140300 143830 157710 73038 148850 167560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 89276000 3603 614 3434 6659;6660 5474;5475 5475 2 9606 Homo sapiens -0.03703094852698996 DDPTLLSSGR Unmodified 1059.5197 0.51965261 1398 B7Z972;A0A384MDK7;A0A3F2YNX8;P22061;P22061-2;F6S8N6 PCMT1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 2.5 0.5 1 1 42.548 42.62 2 1.0124E-06 10740 20230619_1882_Aki_TMTPro18x_K_F3 179.51 156.68 160110 113860 134580 163760 162060 175560 156750 169970 228880 190460 221220 275990 255930 223840 169310 307310 339460 375230 147730 104700 139420 161340 166200 176470 160590 174600 228680 194060 229080 274550 256250 237050 183850 310770 323400 355540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 167520000 3604 1398 3435 6661;6662 5476;5477 5477 2 9606 Homo sapiens -0.007726431499804676 DDQLLDDGK Unmodified 1017.4615 0.46146903 1399 A0A8I5KUS5;A0A384MDL3;Q15370;Q15370-2;B8ZZU8 TCEB2 Transcription elongation factor B polypeptide 2 yes no 0 0 0 1.5 0.5 1 1 47.409 47.409 2;3 0.00033889 13251 20230619_1881_Aki_TMTPro18x_K_F2 120.09 84.795 25883 15994 20153 23952 21723 27851 22864 26177 40023 31814 34288 48986 45016 45292 25443 52074 65004 73801 23853 14724 20999 23571 22552 27808 23516 27006 39557 32400 35985 48803 44775 47193 28547 53340 61874 69834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93794000 3605 1399 3436 6663;6664 5478;5479 5479 2 9606 Homo sapiens -0.04656324795280398 DDREAQSICER Unmodified 1377.5943 0.59429089 1172;3819 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087X253;B4DWG4;A0A087WZQ6;A0A087WU93;A0A087WYD1;Q10567-4;Q10567-3;Q10567-2;Q10567;C9J1E7 AP2B1;DKFZp781K0743;AP1B1 AP-2 complex subunit beta;AP complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 1 1 0 1 30.593 30.593 3 6.1963E-09 6195 20230619_1880_Aki_TMTPro18x_K_F1 160.18 136.51 73683 40569 55795 66495 57112 61675 63731 68369 88290 77893 73605 82584 109790 85415 55007 104810 127130 117650 67856 37412 58245 64923 59477 62856 64633 69637 87992 78389 77776 83740 108340 89105 61141 105560 120880 111640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 269030000 3606 1172;3819 3437 6665 5480 5480 1 9606 Homo sapiens -0.07940248400950622 DDREQFYK Unmodified 1099.4934 0.49343786 3677 P60604;P60604-2;Q8NDD5 UBE2G2;DKFZp586L2318 Ubiquitin-conjugating enzyme E2 G2 yes no 0 0 1 3 0 1 39.342 39.396 3 0.064626 9328 20230619_1882_Aki_TMTPro18x_K_F3 57.047 34.961 113500 76097 94346 116500 133720 138390 119980 125370 164270 134920 153510 159140 173150 139870 125010 158750 168700 159450 104690 70044 98146 114520 135470 137950 123110 129230 164350 136660 158830 159810 173790 145930 130560 159180 160930 151480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186470000 3607 3677 3438 6666 5481 5481 1 9606 Homo sapiens -0.052329123214803985 DDRGPPQRPK Unmodified 1164.6 0.59996862 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;F8VX11;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 2 5.5 0.5 1 1 28.114 28.166 4 0.0018873 5134 20230619_1886_Aki_TMTPro18x_K_F6 93.096 67.053 112150 49517 137960 129890 166260 164690 140980 162820 157650 118920 176650 185170 167030 146790 171680 72308 183650 158510 103600 46090 138340 124900 169570 163710 144250 165240 160240 124570 180020 183510 171000 148810 174570 79049 175430 149740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125330000 3608 2578 3439 6667;6668 5482 5482 1 9606 Homo sapiens 0.024252629636976053 DDRVEERDPPR Unmodified 1382.6539 0.65385468 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 2 1 0 1 26.056 26.056 4 0.00048857 4468 20230619_1880_Aki_TMTPro18x_K_F1 104.59 81.357 16677 7747.4 11627 16299 12095 16820 12183 17971 28012 17867 23478 29007 29633 27955 11831 35497 40737 40518 15340 7178.7 12268 15744 12605 16969 12774 18267 27422 18427 24572 28924 29259 29256 14069 35752 38696 38432 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18348000 3609 3152 3440 6669 5483 5483 1 9606 Homo sapiens -0.022166093952591837 DDSFDSLDSFGSR Unmodified 1446.5899 0.58991702 2848 Q9UPQ0-10;Q9UPQ0;D6RD46;Q9UPQ0-2;Q9UPQ0-4;G5EA03;E9PDJ9;B7Z2J4;E7EPK0;Q9UPQ0-3;Q9UPQ0-8;Q9UPQ0-5;Q9UPQ0-6;H0Y8P3;Q9UPQ0-9;B7Z5Q8;B7Z5G6;Q6N054;Q6NVB9;D6RJ93;Q9UPQ0-7;D6R8Y0 LIMCH1;DKFZp686G03277 LIM and calponin homology domains-containing protein 1 yes no 0 0 0 1.5 0.5 1 1 55.699 55.71 2 1.2302E-05 16727 20230619_1880_Aki_TMTPro18x_K_F1 132.17 124.25 34694 24783 26485 31281 32978 40235 34523 33080 36409 34703 34886 41752 41581 38360 40829 43987 43994 51746 31992 22755 27720 31161 33832 39830 34770 34338 36937 35211 36217 41940 42215 39974 41725 44536 42116 49038 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42321000 3610 2848 3441 6670;6671 5484 5484 1 9606 Homo sapiens -0.1155143434286856 DDSPDLPK Unmodified 885.40798 0.40797689 2776 CON__P02769 yes yes 0 0 0 1.5 0.5 1 1 42.929 42.97 2 0.00089238 11178 20230619_1881_Aki_TMTPro18x_K_F2 153.71 116.07 + 30966 51506 82219 35131 271700 406030 137370 147560 361350 88507 95657 203420 76834 115160 75427 86898 238370 414970 29210 46953 81977 41518 264840 376140 152830 166670 344080 96938 110450 197840 79669 120480 85822 105930 227720 390010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154810000 3611 2776 3442 6672;6673 5485 5485 1 9606 Homo sapiens -0.039310775071271564 DDTDDEIAK Unmodified 1020.4247 0.42474917 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;A0A7P0Z484;A0A7P0TAR9;A0A7P0Z4H2;Q16094;A0A7P0TAN9;A0A7P0T8N1;D6RAU8;D6RAQ8 CANX Calnexin yes no 0 0 0 1 0 1 41.205 41.205 2 0.015693 10661 20230619_1880_Aki_TMTPro18x_K_F1 84.615 40.168 34247 19732 32473 41003 41681 56140 35621 49769 55579 38579 57913 85194 58370 64095 46989 48275 94956 112210 31596 18256 33334 39801 42531 55396 36919 50962 55506 41027 59491 83551 59174 65978 50634 52327 90509 105840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40284000 3612 1700 3443 6674 5486 5486 1 9606 Homo sapiens -0.08464621411860662 DDTHYFVMTAK Oxidation (M) 1342.5864 0.58635197 1293;4160 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5;B4DJ91;A0A1S5UZH2;Q8TDZ2;Q8TDZ2-4;Q8TDZ2-2 MICAL3;hCG_21531;MICAL1 Protein-methionine sulfoxide oxidase MICAL3;Protein-methionine sulfoxide oxidase MICAL1 no no 0 1 0 5 0 1 44.021 44.1 3 0.024742 11260 20230619_1885_Aki_TMTPro18x_K_F5 52.391 38.427 35567 25708 32604 41864 40430 40412 39012 40361 44795 39352 47654 47254 47941 40036 43623 42868 51713 47398 32842 23674 33535 40897 41317 40964 39602 41222 45402 40070 48766 47374 48714 41691 44874 43295 49370 44987 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23307000 3613 4160;1293 3444 6675 5487 5487 818 1 9606 Homo sapiens -0.07123775650416064 DDTIYEDEDVK Unmodified 1340.562 0.56197093 2203;3454 B2R4A2;P14927;B7Z2R2;P14927-2;E5RHG9 UQCRB Cytochrome b-c1 complex subunit 7 no no 0 0 0 1 0 1 47.999 47.999 2 2.2032E-17 13523 20230619_1880_Aki_TMTPro18x_K_F1 239.93 202.46 61133 48586 64069 74698 78378 102130 90814 84029 121350 72845 97660 108660 105090 102030 93308 97320 106850 107830 56540 44691 65158 73584 80772 100690 91718 86824 120740 75443 101700 108460 106570 105140 95856 98471 102110 102300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140930000 3614 2203;3454 3445 6676 5488 5488 1 9606 Homo sapiens -0.09468757322952115 DDTSRYDER Unmodified 1155.4792 0.47924436 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-4 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 1 1 0 1 27.515 27.515 3 0.014435 5045 20230619_1880_Aki_TMTPro18x_K_F1 69.276 43.337 5280.5 2827.4 9560.9 5627.1 16460 9370 9065.8 12011 6326.4 6167.6 11044 11494 8869.1 7368.5 14415 5091.6 12052 10370 4904.9 2615.2 9423.2 5508.9 16264 9267.4 9502.2 11918 6790.5 6695.5 11031 11284 9377.9 7621.1 14377 5479.3 11542 9799.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2886600 3615 33 3446 6677 5489 5489 1 9606 Homo sapiens -0.09227609540425874 DDVAPESGDTTVK Unmodified 1332.6045 0.60450445 3325 O76021;J3QSV6;A0PJ61;Q32Q62;O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 0 1.5 0.5 1 1 41.615 41.653 2 4.0658E-06 10816 20230619_1880_Aki_TMTPro18x_K_F1 164.04 132.96 17846 10351 15533 19795 23255 28887 20761 19399 27476 21747 27933 34928 36538 29385 22524 19184 39666 52059 16454 9563.9 16118 19300 23521 28277 21275 20546 27616 22277 29043 34625 36354 30012 24077 21285 37872 49052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47429000 3616 3325 3447 6678;6679 5490 5490 1 9606 Homo sapiens -0.048493621947272914 DDVAQTDLLQIDPNFGSK Unmodified 1974.9535 0.95345032 1704 P08195-4;P08195-5;P08195;P08195-3;A0A7P0Z4P5;A0A7P0TAN7;A0A7P0Z4A0;A0A7P0T9F7;F5GZS6;P08195-2;A0A7P0TBF8;B4E2Z3;F5H056;F5GZI0;A0A7P0TAS6;A0A024R599;A0A7P0T8U7;A0A7P0T8F1;H0YH36;A0A7P0TAT7;F5H0E2 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 0 4 0.816 1 1 1 62.443 62.47 3 1.7653E-06 19387 20230619_1883_Aki_TMTPro18x_K_F4 102.89 85.406 19107 20412 16482 18000 15359 19499 17136 17205 22898 23491 25337 36566 29509 26412 31949 40993 44861 49560 17681 18658 16956 18411 16128 19564 17359 17913 23105 23798 26150 36172 30132 28348 33208 41399 42830 46964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 474750000 3617 1704 3448 6680;6681;6682 5491 5491 1 9606 Homo sapiens 0.004971735851313497 DDVSISVEEGK Unmodified 1176.551 0.55101232 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5;V9GZ76 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 1 0 1 47.636 47.636 3 0.00032815 13395 20230619_1880_Aki_TMTPro18x_K_F1 81.525 58.992 31559 26635 27609 29923 32169 39302 29427 38090 48642 34178 38658 50909 44604 45469 34862 48606 50484 54722 29157 24412 28458 30079 33061 38995 30436 38866 48027 35291 40459 50718 44946 47207 36560 49098 48181 51895 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40260000 3618 3402 3449 6683 5492 5492 1 9606 Homo sapiens -0.030201149065533173 DDVTALHCK Unmodified 1057.4862 0.48624399 3327 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;O76094-2;Q71V07;R4GNC1;D6RDY6 HEL103;SRP72 Signal recognition particle subunit SRP72 yes no 0 0 0 4 0 1 38.614 38.657 3 0.0011471 9002 20230619_1883_Aki_TMTPro18x_K_F4 96.331 78.019 54927 34659 47304 58396 54617 66715 57375 61297 98648 69688 70503 96266 108800 96570 63285 117220 155080 176650 50658 31951 48873 57077 56381 66653 58935 63223 96989 70884 75445 96526 107830 100770 70513 120580 147640 167070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48784000 3619 3327 3450 6684 5493 5493 1 9606 Homo sapiens -0.04019968193551904 DDVTGEEAR Unmodified 990.42542 0.42541787 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-5;Q13308-3;Q59FV9;Q86X91;B7Z471;F8WDG7;C9J9E8 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 1 0 1 31.421 31.421 2 0.0055583 6552 20230619_1880_Aki_TMTPro18x_K_F1 85.731 72.152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3620 3847 3451 6685 5494 5494 1 9606 Homo sapiens -0.07017781972137982 DDYGPESR Unmodified 937.37774 0.3777394 1633 A0A6Q8PGB0;P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 0 1 0 1 32.523 32.523 2 0.0041158 6986 20230619_1880_Aki_TMTPro18x_K_F1 117.4 106.03 14286 7991.6 13452 14211 21464 23518 19017 21606 23518 17405 20183 30179 28885 28420 17523 13704 36236 42419 13177 7377.3 13862 13951 21602 23016 19452 22080 23564 18218 21300 29940 28711 28620 19026 15625 34532 39963 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6823500 3621 1633 3452 6686 5495 5495 1 9606 Homo sapiens -0.09345436172316113 DDYPSSPPK Unmodified 1004.4451 0.44509068 2061 H3BQQ9;A8K503;Q7KZS0;B0QYN7;P63279;H3BPC4 UBE2I SUMO-conjugating enzyme UBC9 yes no 0 0 0 3.5 0.5 1 1 40.478 40.528 2 0.00014719 9747 20230619_1882_Aki_TMTPro18x_K_F3 161.92 85.016 117640 59156 92421 108380 104050 146740 115840 122730 210840 146480 164950 235950 247960 235720 113180 179100 331430 309920 108320 54667 96297 105790 107990 144740 118980 127670 207420 149720 175290 235170 244470 240220 129820 188000 314850 293050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159360000 3622 2061 3453 6687;6688 5496;5497 5496 2 9606 Homo sapiens -0.05695405961364486 DDYSRDDYR Unmodified 1203.4792 0.47924436 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;F8VX11;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 1 1 0 1 31.249 31.249 2 0.0072095 6475 20230619_1880_Aki_TMTPro18x_K_F1 99.442 61.883 5352.4 4589.9 6897.3 6656 8073.2 7559 6953.5 7736.5 9866.9 9469.6 11946 8625.9 11341 8252.6 7582.3 9173.8 14187 10464 4962.5 4217.8 6892 6563.5 8252.9 7581.1 7171.1 7933.2 9966.4 9453.6 12102 8793.9 11411 8584.3 8147.4 9271.4 13484 9938.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14015000 3623 2578 3454 6689 5498 5498 1 9606 Homo sapiens -0.11435609540421865 DDYSRDDYRR Unmodified 1359.5804 0.58035539 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;F8VX11;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 2 2 0 1 27.312 27.388 4 0.071477 4726 20230619_1881_Aki_TMTPro18x_K_F2 48.981 31.614 8245.6 7683.6 6909.9 6764.4 11565 7271.8 10646 9451.1 10104 10987 12564 9026.2 10941 9140.3 9288.6 7912.4 13045 9104.9 7620.9 7026 7194.3 6924.8 11575 7386.7 10766 9544.3 10426 10959 12678 9261.4 11140 9365.5 9671.8 8044.4 12418 8649.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13243000 3624 2578 3455 6690 5499 5499 1 9606 Homo sapiens -0.08505157837726074 DEAAYGELR Unmodified 1022.4669 0.46688876 892 Q86SZ7;Q2TNB3;A0A087X1Z3;Q9UL46;H0YM70 PSME2 Proteasome activator complex subunit 2 yes no 0 0 0 1 0 1 40.507 40.507 2 0.0083297 10309 20230619_1880_Aki_TMTPro18x_K_F1 88.177 60.652 84416 52219 76469 87774 103900 124070 103940 116620 164830 110150 145010 176480 150680 143570 122820 143420 180440 202750 77877 48142 78845 86124 105960 122440 106650 119440 163460 113800 150120 174960 152460 149150 128670 147380 172240 191860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188630000 3625 892 3456 6691 5500 5500 1 9606 Homo sapiens -0.043446012128015354 DEADLSSK Unmodified 863.38724 0.38724145 1210 A0A140VJX5;Q96SK2-2;Q96SK2;Q96SK2-3 TMEM209 Transmembrane protein 209 yes no 0 0 0 2.5 0.5 1 1 30.08 30.161 3 0.0099626 5782 20230619_1881_Aki_TMTPro18x_K_F2 75.38 39.886 44342 479900 99708 39094 65988 218800 78053 71758 60898 54652 65843 69411 55015 46710 141110 40421 150070 63620 44556 434640 95995 79335 72503 205120 77562 82876 63166 56732 67070 68978 60630 48626 141860 42346 142900 60498 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 464790000 3626 1210 3457 6692;6693 5501;5502 5501 2 9606 Homo sapiens -0.049916678867930386 DEAPVADGVEK Unmodified 1128.5299 0.52988294 3467 Q5U058;P17677;P17677-2 GAP43 Neuromodulin yes no 0 0 0 1 0 1 42.973 42.973 2 1.8133E-10 11434 20230619_1880_Aki_TMTPro18x_K_F1 194.12 136.53 47575 22969 38745 59188 16174 22948 25331 27443 45586 38697 55875 86714 61196 62221 40503 52428 99769 117680 43811 21359 39865 56225 18942 25994 25684 28130 45644 39967 57244 84891 61442 64497 44884 56437 95009 111020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38089000 3627 3467 3458 6694 5503 5503 1 9606 Homo sapiens -0.029240802154163248 DEAQNEGPATESEAPLK Unmodified 1784.8065 0.80645173 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24;E2PSM9 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 1 0 1 44.164 44.164 3 0.014513 11975 20230619_1880_Aki_TMTPro18x_K_F1 57.52 47.035 11850 9152.8 10085 13709 14068 15675 12704 14655 16944 16603 19723 24182 22695 17818 15427 19640 26730 27835 10940 8417.4 10473 13484 14274 15672 13024 15092 17135 16902 20254 23973 22723 18700 16461 20151 25474 26347 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45623000 3628 2414 3459 6695 5504 5504 1 9606 Homo sapiens -0.05455923299814458 DEAQVCAIIER Unmodified 1302.6238 0.6238001 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 2.5 0.5 1 1 49.492 49.551 2 9.9158E-06 14219 20230619_1881_Aki_TMTPro18x_K_F2 147.62 110.92 186220 138840 134340 165590 136090 174460 170950 160640 203710 212140 177000 222220 280400 231130 166200 327320 289800 289280 171700 127390 141040 165120 142520 175390 171290 166490 204840 212000 187570 225500 277590 243180 178710 324740 276080 275170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163330000 3629 12 3460 6696;6697 5505;5506 5505 2 9606 Homo sapiens -0.015406843848040808 DEATAAVIDLNDRPIGSR Unmodified 1911.965 0.96501806 4096 Q69YJ7;Q9NTZ6;B4DRP9;B3KQH4 DKFZp667H197;RBM12 RNA-binding protein 12 yes no 0 0 1 3.5 0.5 1 1 49.491 49.547 3 2.4613E-09 13824 20230619_1883_Aki_TMTPro18x_K_F4 127.62 111.19 141370 142130 145710 154520 147040 159880 164160 158610 199320 167370 170720 173210 190610 154390 172860 166240 170880 172470 130940 130160 147730 155170 153100 161300 165600 162390 199860 168930 177400 174900 193000 160550 175940 167260 163520 163740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 307770000 3630 4096 3461 6698;6699 5507;5508 5508 2 9606 Homo sapiens 0.04551415399146208 DECCFDANQPEGR Unmodified 1596.5933 0.59330461 359 A0A024R5U5;O14672-2;O14672;A0AV88 ADAM10 Disintegrin and metalloproteinase domain-containing protein 10 yes no 0 0 0 1 0 1 38.891 38.891 2 0.019922 9590 20230619_1880_Aki_TMTPro18x_K_F1 62.303 62.303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3631 359 3462 6700 5509 5509 1 9606 Homo sapiens -0.18112830832160398 DECLLPCK Unmodified 1033.4573 0.45725205 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;B4DG89 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 0 4 0 1 49.506 49.541 2 0.0025305 13779 20230619_1883_Aki_TMTPro18x_K_F4 125.25 54.985 55967 40831 52051 55447 49367 65576 60742 56063 75642 77051 79296 78033 91975 67407 65969 78239 89412 82770 51686 37517 53200 54909 51913 65288 61039 58501 76382 76790 81697 78798 92173 70517 68894 78669 85276 78592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25992000 3632 534 3463 6701 5510 5510 1 9606 Homo sapiens -0.05813828814189037 DECNVVEVVAR Unmodified 1288.6082 0.60815004 3311 O75607 NPM3 Nucleoplasmin-3 yes yes 0 0 0 2 0 1 46.618 46.697 2 2.0518E-08 12891 20230619_1881_Aki_TMTPro18x_K_F2 172.1 129.23 56339 35106 39467 48300 48132 67781 52358 53364 84699 69171 57965 85178 96679 88473 46524 130240 117620 140630 51888 32284 41699 47913 49650 66678 53505 55925 83413 69627 62538 85882 95212 93346 52584 130490 112010 133380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98481000 3633 3311 3464 6702 5511 5511 1 9606 Homo sapiens -0.024609709018477588 DEDGSTLFR Unmodified 1038.4618 0.46180338 319 A0A024R542;Q9C0C2;B3KXS7;E9PKK0 TNKS1BP1 182 kDa tankyrase-1-binding protein yes no 0 0 0 1 0 1 44.551 44.551 2 0.015222 12128 20230619_1880_Aki_TMTPro18x_K_F1 75.696 54.014 31313 22350 26138 32605 33850 35907 32880 32587 42882 40038 47869 46905 41216 34766 40830 40807 48525 51225 28892 20555 27136 32105 34542 35978 33514 33726 43298 40277 48578 46888 42260 36597 41951 41491 46373 48534 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24608000 3634 319 3465 6703 5512 5512 1 9606 Homo sapiens -0.055889050754103664 DEDIPLFPVQTK Unmodified 1400.7187 0.71874635 3008 G3V529;Q9GZR7;B4DM03;B4DKV2;Q9GZR7-2;A0A1W2PRR2;F5GYL3;B4E300;Q7Z4W0;A0A087WXU8;Q7Z4X3;B4DGI6 DDX24 ATP-dependent RNA helicase DDX24 yes no 0 0 0 4.5 0.5 1 1 61.364 61.391 3 0.0012387 18906 20230619_1883_Aki_TMTPro18x_K_F4 67.252 47.121 43268 34821 41664 45473 34166 45282 44840 43705 48755 51055 47841 44254 53357 42830 47059 57527 48526 52181 39992 31968 42378 45039 36430 45746 44724 44961 49434 50998 49346 45213 53964 45017 48104 57242 46440 49605 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55574000 3635 3008 3466 6704;6705 5513 5513 1 9606 Homo sapiens 0.03441572358042322 DEDPYVRK Unmodified 1020.4876 0.4876242 1172;3819 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087X253;B4DWG4;A0A087WZQ6;A0A087WU93;A0A087WYD1;K7ERB2;Q10567-4;Q10567-3;Q10567-2;Q10567;C9J1E7 AP2B1;DKFZp781K0743;AP1B1 AP-2 complex subunit beta;AP complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 1 3 0 1 37.097 37.151 3 0.0030159 8423 20230619_1882_Aki_TMTPro18x_K_F3 99.7 69.353 115560 62540 92772 101410 100950 122640 98430 124110 171430 155470 160740 195480 212290 193710 106840 191920 307830 282530 106450 57671 96311 99443 104450 122350 101700 127440 170110 156730 167730 196460 210350 199860 122020 197670 292410 267480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149760000 3636 1172;3819 3467 6706 5514 5514 1 9606 Homo sapiens -0.021800108331376578 DEELEKDTMDNWDEK Unmodified 1895.7731 0.7731027 2690 B7Z592;Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes no 0 0 1 2 0 1 53.523 53.552 3 0.018329 15983 20230619_1881_Aki_TMTPro18x_K_F2 61.657 52.611 21250 22826 27517 21542 17853 16240 20997 21197 15694 21359 21868 10911 16519 12062 28401 8459.2 10821 9198.5 19736 20874 27241 21831 19331 16968 20860 21317 16552 21239 21865 11605 17552 12237 27589 8668.9 10513 8734.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6601200 3637 2690 3468 6707 5515 5515 1 9606 Homo sapiens -0.13895293134032727 DEENNPLETEYGLSVYK Unmodified 1998.9058 0.90583143 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 3.5 0.5 1 1 60.754 60.77 3 1.3662E-18 18729 20230619_1882_Aki_TMTPro18x_K_F3 183.36 171.88 53967 40992 41307 53927 41952 62250 48065 53653 68527 71208 72978 98168 99342 101550 57377 129690 116480 160730 49783 37645 43118 53474 43889 62070 48755 55875 68874 71876 75931 98567 98749 106080 62762 131350 111180 152180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143010000 3638 1104 3469 6708;6709 5516;5517 5516 2 9606 Homo sapiens -0.053665254056795675 DEFEGLFK Unmodified 983.46001 0.46001246 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 4 0.816 2 2 2 60.956 60.983 2;3 0.00065724 18700 20230619_1883_Aki_TMTPro18x_K_F4 159.04 98.681 771870 644830 747340 846460 736730 885900 863390 859270 988660 1060900 1081400 1149200 1099500 981980 1034600 1118400 1014100 1215100 713630 591950 761790 838600 770200 891980 867210 885170 1004200 1063900 1106500 1156600 1118700 1025600 1052700 1126900 971870 1152400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2905000000 3639 134 3470 6710;6711;6712;6713;6714;6715 5518;5519;5520;5521 5520 4 9606 Homo sapiens -0.03237914093381278 DEFRPNLSHTGR Unmodified 1427.6906 0.69057454 136 A0A7P0TAH4;A0A7P0Z4K4;A8K0I0;A0A024R1C1;A0A7P0TA15;Q13356;A0A7P0TB19;A0A7P0T8E8;Q13356-2;A0A7P0TBL3;B4DRD4;A0A7P0T843 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes no 0 0 1 6 0 1 34.042 34.089 4 3.0298E-07 7265 20230619_1886_Aki_TMTPro18x_K_F6 136.3 90.94 35338 24068 36739 39150 45894 50603 44711 40444 45511 42005 51567 40046 45548 40901 43723 43211 46867 44241 32652 22169 37359 38415 46901 50045 45171 42069 46540 42332 52283 40820 46601 42281 44663 43452 44793 42019 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22657000 3640 136 3471 6716 5522 5522 1 9606 Homo sapiens -0.0061631277869764745 DEFSHQVQEWNR Unmodified 1573.691 0.69096847 4147 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 3 0 1 44.1 44.169 3 3.5007E-06 11479 20230619_1882_Aki_TMTPro18x_K_F3 142.51 140.69 34009 26417 32782 32317 33894 41551 36649 37061 50843 35315 40195 39636 43277 33766 39185 38378 51533 44451 31428 24240 33423 32276 35252 41200 37226 38120 50513 35952 41867 39851 43875 35291 40589 38836 49138 42182 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28151000 3641 4147 3472 6717 5523 5523 1 9606 Homo sapiens -0.07292937849479131 DEFTIIPVLVGALSESK Unmodified 1816.9822 0.98223126 2033 A8K3Y8;Q9Y316;Q9Y316-3;Q9Y316-2 MEMO1 Protein MEMO1 yes no 0 0 0 8 0 1 67.348 67.367 3 0.00033442 20877 20230619_1888_Aki_TMTPro18x_K_F8 76.391 57.068 3297.4 2383.9 1757.9 2303.7 2570.7 3342.7 3898.9 2242.3 5054.2 3122.4 3782.9 4544.8 3259.7 2796.8 3883.2 7018.6 4076.4 6244.2 3035 2183.5 1931.4 2346.4 2650.9 3276.3 3881 2395.5 5023.4 3156.8 3924.5 4496 3375.3 3163 3967.3 6929.7 3913.4 5931 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1708300 3642 2033 3473 6718 5524 5524 1 9606 Homo sapiens 0.10641942952224781 DEFTNTCPSDK Unmodified 1312.5241 0.52414564 2612 B4DWC4;Q6FIC5;Q9Y696;B3KTR3 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 0 0 2 0.816 1 1 1 42.947 42.996 3 0.00018968 10909 20230619_1882_Aki_TMTPro18x_K_F3 112.13 99.358 474580 319800 412350 382180 388270 491880 400870 404030 619130 611560 573460 717620 807730 658630 492780 930920 824200 747800 437870 293550 423520 382360 406660 486960 410280 424320 616990 610440 601300 721690 802200 695450 527310 919540 784860 712490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1071099999.9999999 3643 2612 3474 6719;6720;6721 5525;5526 5526 2 9606 Homo sapiens -0.11961546789393651 DEFTNTCPSDKEVEIAYSDVAK Unmodified 2517.1217 0.12171422 2612 B4DWC4;Q6FIC5;Q9Y696;B3KTR3 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 0 1 3.8 0.748 2 2 1 57.275 57.302 3;4 9.5487E-17 17330 20230619_1882_Aki_TMTPro18x_K_F3 157.28 144.97 112980 112860 148780 103710 108720 95567 131370 106420 78894 145770 141090 67688 85500 47785 179050 53815 54588 40763 104890 103210 147240 105600 116250 97687 129650 109050 86038 142650 139100 71643 93101 50445 172860 53673 53337 38906 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 274740000 3644 2612 3475 6722;6723;6724;6725;6726 5527;5528;5529 5527 3 9606 Homo sapiens -0.07616177073941799 DEGEGAAGAGDHQDPSLGAGEAASK Unmodified 2295.984 0.98397518 4031 Q5CZB5 DKFZp686M0430 yes yes 0 0 0 1 0 1 39.876 39.876 4 8.0847E-20 10061 20230619_1880_Aki_TMTPro18x_K_F1 159.98 152.95 21657 16440 14849 16398 15001 15925 16978 17530 19820 20915 25940 24821 25416 20302 19901 25158 29098 30581 19964 15059 15660 16570 15639 16189 17100 17890 20271 21069 26286 24877 25691 21361 20871 25488 27762 28983 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43924000 3645 4031 3476 6727 5530 5530 1 9606 Homo sapiens -0.11217744558416598 DEGLHCDFACLMFK Unmodified 1741.7262 0.72623304 2856 D6W4Z6;P31350;P31350-2;A0A7P0SBL1;A0A286YFD6;B3KS26;Q8N6S3 hCG_23833;RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes no 0 0 0 6 0.816 1 1 1 61.191 61.239 3 1.851E-05 18655 20230619_1886_Aki_TMTPro18x_K_F6 113.69 102.25 197450 132050 157480 194420 120310 159290 161240 136730 211590 205120 195310 156170 207290 148620 150230 214940 173740 159850 182060 121490 162980 190620 129410 163130 161730 143230 212070 202240 201320 160650 208290 157150 155420 211660 165910 152460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165460000 3646 2856 3477 6728;6729;6730 5531 5531 1 9606 Homo sapiens -0.11496102699879884 DEHLQQYQEVCAQR Unmodified 1802.8006 0.80059527 4059 Q5T1M5;A0A8I5QJ94;Q5T1M5-2;A0A8I5QJL3;A0A8I5KX71;B4DVS2;B4DZS8 FKBP15 FK506-binding protein 15;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 3 0 1 38.097 38.15 3 1.7532E-17 8826 20230619_1882_Aki_TMTPro18x_K_F3 217.2 192.02 14815 5019.4 11853 15177 15867 13079 15403 15250 21298 18653 20560 28394 26997 24083 16524 29412 28831 33119 13627 4696.8 12363 14443 16134 13428 15735 15530 21334 18970 21450 28224 26873 25259 17738 29636 27496 31402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29416000 3647 4059 3478 6731 5532 5532 1 9606 Homo sapiens -0.06869300292464686 DEHNEERDVMLAK Oxidation (M) 1600.7151 0.71513431 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 1 1 1.5 0.5 1 1 36.217 36.246 4 0.0034186 8441 20230619_1880_Aki_TMTPro18x_K_F1 89.231 76.353 28191 7152.1 17010 25991 28224 19863 27970 27284 35450 29455 38471 38263 43637 36571 20270 42421 29941 39786 25870 6745 18420 24575 28372 20713 28431 27433 35786 29930 39513 38414 43257 38079 21685 42323 28622 37781 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74894000 3648 2188 3479 6732;6733 5533 5533 1361 1 9606 Homo sapiens -0.06119465478127495 DEHNEERDVMLAK Unmodified 1584.7202 0.72021968 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 1 2 0 1 39.397 39.467 3 0.067104 9562 20230619_1881_Aki_TMTPro18x_K_F2 52.132 34.466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3649 2188 3479 6734 5534 5534 1 9606 Homo sapiens -0.048751616154959265 DEILEWESR Unmodified 1175.5459 0.54586736 3862 Q59GU6;Q53HL9;Q53GY8;Q13596;Q13596-2;Q13596-3;H0YK42 SNX1 Sorting nexin-1 yes no 0 0 0 1 0 1 54.725 54.725 2 0.00014598 16308 20230619_1880_Aki_TMTPro18x_K_F1 148.14 114.33 118450 91892 108040 104540 96535 143090 117520 117610 159500 150680 148210 156830 171200 152150 131440 173830 176490 194010 109410 84260 110470 105060 102140 141100 118580 122760 159670 150780 153610 158760 172210 158260 137080 175330 168550 184000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254890000 3650 3862 3480 6735 5535 5535 1 9606 Homo sapiens -0.03488373978530035 DEILPTTPISEQK Unmodified 1469.7613 0.76133944 3494 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;Q9NQS8;E9PPU1;E9PSF4 RPS3 40S ribosomal protein S3 yes no 0 0 0 4 0.816 1 1 1 53.98 54.026 3 0.0012509 16042 20230619_1882_Aki_TMTPro18x_K_F3 82.069 70.153 37137 37353 42276 41301 40077 49620 49199 44192 55031 43506 48002 39609 48118 47008 55702 57390 50959 62241 34428 34211 42492 41509 42075 49416 49245 45513 55406 43933 49554 40710 49508 48786 56262 57767 48881 59024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2781200000 3651 3494 3481 6736;6737;6738 5536 5536 1 9606 Homo sapiens 0.04524922695600253 DEISVDSLDFNKK Unmodified 1508.7359 0.73585297 1204 A0A140VJT0;P63151;P63151-2;Q56VW8;A0A590UJY3;A0A590UJJ1;Q6ZP32;E5RFR9;Q66LE6;Q6IN90;Q6PEG1;B3KMA9 PPP2R2A;PPP2R2D Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform yes no 0 0 1 4 0 1 54.634 54.649 3 8.4391E-05 16094 20230619_1883_Aki_TMTPro18x_K_F4 107.17 95.189 133050 94556 111960 129350 103640 141070 116890 127660 151760 171110 151870 186460 189190 159520 140850 181410 182760 209620 122770 86897 115490 127870 109000 141360 118220 132490 152810 171040 157620 187510 189630 166640 146620 183400 174640 198700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51947000 3652 1204 3482 6739 5537 5537 1 9606 Homo sapiens 0.001834481731748383 DEIVEIHEENEVASGTQSGGTEAEAVPAQK Unmodified 3123.448 0.44801039 3790;4031 Q5CZB5;Q02952-3;Q02952-2;Q02952 DKFZp686M0430;AKAP12 A-kinase anchor protein 12 no no 0 0 0 1 0 1 49.425 49.425 4 9.4195E-06 14099 20230619_1880_Aki_TMTPro18x_K_F1 73.341 66.388 6620.5 5946.6 6064.3 7154.7 5091.9 8405.5 7970.1 7752.3 10731 9776.5 9237.7 13963 11112 9894.8 9078.2 15709 13640 13516 6121.3 5452.7 6203.7 7141.5 5470.6 8382.7 7951 8021.2 10715 9900 9660.4 13839 11196 10638 9555.8 15548 13005 12862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6977600 3653 4031;3790 3483 6740 5538 5538 1 9606 Homo sapiens -0.028775691580449347 DELEVIHLIEEHR Unmodified 1630.8315 0.83148469 560 A0A024R983;P10155;P10155-3;P10155-5;P10155-4;B3KN94 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 0 0 2 0.816 1 1 1 57.174 57.191 4 1.8747E-11 17446 20230619_1881_Aki_TMTPro18x_K_F2 190.85 157.44 24557 14948 22276 29037 23524 32144 26136 26953 35076 38347 32052 43831 39004 37351 30074 47041 40257 49437 22654 13811 22886 28167 24476 32109 26476 28088 35121 38313 33376 43987 39205 39098 31396 46882 38443 46897 2 2 2 2 2 2 2 2 2 3 2 3 2 2 2 2 2 3 428680000 3654 560 3484 6741;6742;6743 5539;5540;5541 5540 3 9606 Homo sapiens 0.041302210840967746 DELGDYLKPK Unmodified 1176.6027 0.60265396 4505 Q9H2W6 MRPL46 39S ribosomal protein L46, mitochondrial yes yes 0 0 1 5.5 0.5 1 1 51.655 51.731 3 0.00062266 14661 20230619_1886_Aki_TMTPro18x_K_F6 104.32 76.027 238330 206800 248390 273730 275150 319830 308290 288030 347800 329870 371260 356820 351330 292070 347600 323370 366840 334640 220540 189830 252100 271460 284680 319110 310100 297630 352920 332000 378870 358790 358960 305100 354440 325210 350580 317850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 288190000 3655 4505 3485 6744;6745 5542 5542 1 9606 Homo sapiens 0.021416735779894225 DELHIVEAEAMNYEGSPIK Oxidation (M) 2160.0045 0.0044996155 1089 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;A0A7I2V4G8;A0A7I2V3G5;A0A7I2V579 NPM1 Nucleophosmin yes no 0 1 0 2 0 1 59.354 59.367 3 1.1046E-14 18344 20230619_1881_Aki_TMTPro18x_K_F2 153.21 137.09 42620 28662 34812 47565 36125 44331 41051 36323 52268 47419 60397 73519 71484 61869 47784 92511 81991 119660 39306 26409 36114 46384 37625 44857 41445 38012 52911 48146 62125 73098 71526 65848 51158 93819 78378 113230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28513000 3656 1089 3486 6746 5543 5543 652 1 9606 Homo sapiens -0.02910245432258307 DELHIVEAEAMNYEGSPIK Unmodified 2144.0096 0.0095849934 1089 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;A0A7I2V4G8;A0A7I2V3G5;A0A7I2V579 NPM1 Nucleophosmin yes no 0 0 0 2.67 0.471 1 2 61.293 61.316 3;4 1.2421E-14 18940 20230619_1882_Aki_TMTPro18x_K_F3 155.49 139.37 426850 320670 372670 412960 316240 446580 358500 408520 539430 601630 493690 697100 732660 674400 482950 888230 860780 1085600 394080 294440 382530 409820 335370 447910 364820 425040 538270 600650 520220 702250 729190 707820 518640 898730 821490 1028200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2376900000 3657 1089 3486 6747;6748;6749 5544;5545;5546 5545 3 9606 Homo sapiens -0.016659415696267388 DELIHELK Unmodified 995.52876 0.52876073 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 0 3 0 1 48.731 48.809 3 0.0042961 13613 20230619_1882_Aki_TMTPro18x_K_F3 96.711 45.833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3658 817 3487 6750 5547 5547 1 9606 Homo sapiens 0.03081750206331435 DELRETLK Unmodified 1002.5346 0.53457439 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PGB5 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 1 4 0.816 1 1 1 42.081 42.144 3 0.0019026 10471 20230619_1883_Aki_TMTPro18x_K_F4 107.15 56.088 312620 254450 246210 271610 290340 315590 305350 299400 390830 340120 395740 400080 354880 309530 377130 402710 445030 378250 288550 233140 256450 273560 298760 315540 309600 308100 393260 343460 404080 400440 364690 327060 386960 401780 424680 359770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 322790000 3659 1637 3488 6751;6752;6753 5548 5548 1 9606 Homo sapiens 0.03340848718005418 DELSDWSLAGEDDRDSR Unmodified 1964.8348 0.83479175 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;P51114-3;B4DM21;B4DM78;B4DGH9;E7EU85;H7C4S4 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 1 1 0 1 51.883 51.883 3 0.00018995 15140 20230619_1880_Aki_TMTPro18x_K_F1 88.536 73.607 29597 22668 27517 30663 24916 39868 29306 34458 46659 45057 42610 61152 58268 57009 35839 78779 70096 107950 27340 20823 28121 30417 26343 39452 29841 35844 46410 45476 44686 61204 58005 60104 38981 80284 66998 102090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39648000 3660 1029 3489 6754 5549 5549 1 9606 Homo sapiens -0.1090322539052977 DELTESPK Unmodified 917.43419 0.43419164 4246 Q8NC51-2;Q8NC51;D3DQ70 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 0 1.5 0.5 1 1 41.49 41.528 2 0.00047578 10509 20230619_1881_Aki_TMTPro18x_K_F2 180.93 115.12 63612 26398 60428 74883 70479 94393 60146 87901 98909 75810 102470 161150 136560 135350 70476 82878 194220 213830 58615 24624 61896 71770 72359 93662 62520 89885 98645 79897 106750 158580 135420 137760 79705 91404 184770 201640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50597000 3661 4246 3490 6755;6756 5550 5550 1 9606 Homo sapiens -0.02782808335655318 DELTLEGIK Unmodified 1016.539 0.53899107 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 55.331 55.357 3 0.00023655 16391 20230619_1883_Aki_TMTPro18x_K_F4 108.98 69.956 34752 26119 32401 39553 35087 39147 40042 40540 43904 43649 39801 41628 43234 35128 38451 45292 40386 42852 32100 24026 33197 38812 36373 39631 40204 41405 44365 43879 41193 42125 43780 36995 39330 45195 38639 40718 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51259000 3662 543 3491 6757;6758 5551 5551 1 9606 Homo sapiens 0.03138313140914306 DENKVDGMNAPK Oxidation (M) 1332.598 0.59797928 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 1 1 4 0 1 36.848 36.892 3 0.085486 8307 20230619_1883_Aki_TMTPro18x_K_F4 45.257 25.679 16381 11423 15240 14126 16430 18237 18167 17911 21957 20301 23693 18547 20602 13031 19334 14951 17879 13659 15124 10487 15589 14103 17026 18121 18334 18377 22211 20335 24054 18726 21027 13746 19577 14939 17091 13002 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18162000 3663 2578 3492 6759 5552 5552 1562 1 9606 Homo sapiens -0.055015786270814715 DENLALYVENQFR Unmodified 1609.7736 0.77363546 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TND0;A0A8V8TLK4 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 3.5 0.5 1 1 62.602 62.62 3 0.025304 19457 20230619_1883_Aki_TMTPro18x_K_F4 54.501 21.895 23393 17251 18357 23523 21095 24809 24802 21215 25717 23944 25865 27426 26106 23488 23933 29575 28336 30458 21579 15850 19144 23242 21815 24900 24809 22013 26148 24166 26554 27554 26547 24673 24650 29654 27084 28912 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54563000 3664 1817 3493 6760;6761 5553 5553 1 9606 Homo sapiens -0.006860408413331243 DENQSINHQMAQEDAQR Oxidation (M) 2028.8555 0.85554397 2493 B4DT77;B4DWU2;B4DHY4;Q53HM8;P20073-2;P20073;B2R657 ANXA7 Annexin;Annexin A7 yes no 0 1 0 1 0 1 28.718 28.718 3 5.7285E-05 5488 20230619_1880_Aki_TMTPro18x_K_F1 92.633 84.033 3738.6 1342.8 3666.8 7568.2 17713 21150 19506 20178 21137 7596.5 6908.4 8655.4 9885.2 4976.9 7067.3 7155.2 7764.3 11004 3432.9 1267.6 3981 7285.9 17343 20303 19576 20321 20834 8402.5 7900.2 8616.7 9844.2 5392.7 7275.5 7367.7 7444.5 10399 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4600000 3665 2493 3494 6762 5554;5555 5554 1523 2 9606 Homo sapiens -0.11772958282540458 DENSVELTMAEGPYK Oxidation (M) 1697.7454 0.74543138 3900;2497 Q14697-2;E9PKU7;B4DZ53;E9PNH1;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 1 0 2.5 0.5 1 1 49.645 49.713 3 6.9929E-05 14314 20230619_1881_Aki_TMTPro18x_K_F2 95.57 83.654 57583 46348 51186 65205 66385 77404 73098 71880 82469 72146 89518 78858 80645 69625 86689 83131 79020 92136 53191 42586 52859 64418 67983 77185 73584 73823 83699 73126 91071 79505 82864 72847 87609 83837 75771 87368 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 293900000 3666 3900;2497 3495 6763;6764 5556 5556 1526 1 9606 Homo sapiens -0.07553151603610786 DENSVELTMAEGPYK Unmodified 1681.7505 0.75051676 3900;2497 Q14697-2;E9PKU7;B4DZ53;E9PNH1;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 3 0.816 1 1 1 55.466 55.49 3 5.3784E-14 16553 20230619_1882_Aki_TMTPro18x_K_F3 176.23 151.3 174560 129060 163360 184620 154210 220390 207080 193110 235860 219320 220710 242150 244280 207230 233810 247110 243070 283660 161230 118640 166960 182250 162760 219320 206560 199910 238010 221000 228380 243550 248080 217080 238530 249680 232760 268880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 525050000 3667 3900;2497 3495 6765;6766;6767 5557;5558;5559 5558 3 9606 Homo sapiens -0.06308847740979218 DEPDTNLVALMK Unmodified 1344.6595 0.65951691 3356 O95433;O95433-2;H0YJG7;H0YJU2 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 4 0.816 1 1 1 61.057 61.085 3 0.00010794 18748 20230619_1883_Aki_TMTPro18x_K_F4 110.08 70.16 103220 79235 109850 106590 83648 123600 110960 124890 138790 143750 122600 141430 184730 149980 122050 211610 169990 203000 95462 72780 110670 105630 89960 123620 111220 127940 139300 144220 129330 144060 183600 157720 128360 210880 162410 192780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 352760000 3668 3356 3496 6768;6769;6770 5560 5560 1 9606 Homo sapiens 0.0009735307219216338 DEPDWESLIFLAR Unmodified 1589.7726 0.77257283 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 4 0.816 2 2 2 65.455 65.485 2;3 5.9246E-06 20377 20230619_1885_Aki_TMTPro18x_K_F5 122.39 110.01 24833 16745 21325 24535 17692 23816 23641 25054 25164 35847 32270 36382 36682 38609 30104 44441 40893 48279 22910 15405 21925 24119 18865 24148 23554 25795 25884 35652 32992 36979 37045 40036 31406 44735 39073 45788 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 73685000 3669 1182 3497 6771;6772;6773;6774;6775;6776 5561;5562;5563 5563 3 9606 Homo sapiens 0.001277447897791717 DEPGAWEETFK Unmodified 1307.567 0.56699673 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 2.5 0.5 1 1 55.875 55.905 2 5.8567E-09 16726 20230619_1882_Aki_TMTPro18x_K_F3 187.97 159.79 100650 71844 81084 95761 74523 110440 90252 105160 154530 120140 116470 177000 162630 155000 104000 182580 190450 224430 92846 66004 84017 94903 78757 110340 92070 108180 152210 122440 123630 176230 161970 162020 111990 185110 181620 212600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127210000 3670 3900;2497 3498 6777;6778 5564;5565 5565 2 9606 Homo sapiens -0.07448408669688433 DEPIHILNVAIK Unmodified 1360.7715 0.77145062 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 7 0 1 56.803 56.859 3 3.0856E-06 16482 20230619_1887_Aki_TMTPro18x_K_F7 142.97 101.68 113720 83571 104150 105400 63258 77619 75637 81953 88777 117810 106580 96555 116580 97323 101550 118750 103300 105380 105020 76724 105960 104310 69387 80702 76083 84410 90557 116450 108870 99028 117920 101510 103720 118200 98831 100230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 447040000 3671 3833 3499 6779 5566 5566 1 9606 Homo sapiens 0.10549575211530282 DEPQEPSNKVPEQQR Unmodified 1779.8388 0.83875492 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 2 0 1 35.693 35.75 3 6.493E-14 7966 20230619_1881_Aki_TMTPro18x_K_F2 178.22 159.74 46321 32377 39629 37770 52203 51363 47744 47034 49366 46353 56307 43714 47340 33935 47445 33589 42673 25656 42742 29708 40982 37892 53071 50827 48454 48315 50460 46800 56969 44184 48542 35326 47896 33377 40757 24515 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51354000 3672 3440 3500 6780 5567 5567 1 9606 Homo sapiens -0.019970911061818697 DEPSVAAMVYPFTGDHK Oxidation (M) 1878.8458 0.84581413 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 1 0 4 0 1 51.992 52.019 4 5.4676E-06 14907 20230619_1883_Aki_TMTPro18x_K_F4 104.45 93.193 56917 44768 50184 56125 48949 55945 54710 60884 69565 63167 66243 66236 66245 56616 63963 72942 64371 66913 52565 41086 51555 55749 51152 56693 55310 61906 69878 63811 68123 66797 67502 59568 65157 72678 61604 63609 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70265000 3673 161 3501 6781 5568 5568 93 1 9606 Homo sapiens -0.05845494549976138 DEPSVAAMVYPFTGDHK Unmodified 1862.8509 0.85089951 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 5.5 0.5 1 1 59.067 59.126 3 8.8338E-10 17480 20230619_1885_Aki_TMTPro18x_K_F5 141 121.09 140830 122830 130850 136720 107170 123350 119240 126250 138460 170030 172010 161560 181480 157330 159820 202290 180490 184330 130200 112560 133410 136810 113610 125860 120240 129960 141460 169190 175230 164340 183910 164780 164280 201430 172520 175260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 708490000 3674 161 3501 6782;6783 5569;5570 5569 2 9606 Homo sapiens -0.046011906873445696 DEPTGEVLSLVGK Unmodified 1342.698 0.6980109 3312 O75643;A0A494C1A5;O75643-2 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 4 0 1 61.3 61.304 3 0.0001415 18909 20230619_1883_Aki_TMTPro18x_K_F4 96.745 60.298 126760 101460 102140 125190 104330 133600 125930 128640 142150 149780 161000 171950 161230 148540 150590 166170 166280 187370 117010 93095 106010 124560 109000 134300 126240 132340 144670 150900 164390 172720 164120 154900 154280 167850 159090 177660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63130000 3675 3312 3502 6784 5571 5571 1 9606 Homo sapiens 0.04036981978379117 DEQLESLFQR Unmodified 1263.6095 0.60953025 3389 Q53XC0;P05198;H0YJS4;G3V4T5 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 3 0 1 57.477 57.51 2 1.6291E-06 17399 20230619_1882_Aki_TMTPro18x_K_F3 170.47 123.81 107800 83182 94937 103510 74348 116020 91015 96601 143110 135000 118010 186920 222190 203710 103590 303080 248650 354530 99550 76342 97283 103010 79714 115850 92434 101080 141970 136070 127130 188070 218140 214830 116570 305130 237240 335800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 349590000 3676 3389 3503 6785 5572 5572 1 9606 Homo sapiens -0.011730135414381948 DEQQQLDFR Unmodified 1177.5364 0.53636531 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-3;Q9NSQ6;H0Y8F1;B3KP36;C9JQR6 PTK7;DKFZp434L0319 Inactive tyrosine-protein kinase 7 yes no 0 0 0 1.5 0.5 1 1 42.282 42.322 2 0.00064803 10881 20230619_1881_Aki_TMTPro18x_K_F2 146.79 103.96 186980 145620 165970 184750 174270 238060 211440 195840 277170 261950 297940 358290 319060 273600 253190 334520 362700 396520 172690 133670 170660 183990 181870 235580 213010 204820 279390 264180 305940 356320 321960 288250 265120 338380 346210 375830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 198900000 3677 3847 3504 6786;6787 5573;5574 5574 2 9606 Homo sapiens -0.04530142264047754 DESANQEEPEAR Unmodified 1373.5695 0.56951593 111 A0A994J7X3;A0A0S2Z4I9;A0A0S2Z4N8;A0A024R0V4;P50552;K7EM16 VASP Vasodilator-stimulated phosphoprotein yes no 0 0 0 1 0 1 29.908 29.908 2 6.24E-05 5957 20230619_1880_Aki_TMTPro18x_K_F1 126.19 112.08 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3678 111 3505 6788 5575 5575 1 9606 Homo sapiens -0.10232605002670425 DESGGGGGPTVPPHQEAASGELR Unmodified 2204.0094 0.0094020725 2077 A8K5Q1;Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes no 0 0 0 1.5 0.5 1 1 36.259 36.288 3 1.4486E-08 8218 20230619_1881_Aki_TMTPro18x_K_F2 109.05 99.517 8772.9 7187 9663.1 12785 12245 15686 14184 12663 13369 13576 14211 16898 14134 13970 14182 12728 18885 17555 8118.9 6623.1 9806 12471 12575 15557 14158 13176 13702 13773 14560 16888 14449 14438 14670 13086 18015 16627 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27206000 3679 2077 3506 6789;6790 5576 5576 1 9606 Homo sapiens -0.0444422524528818 DESSPYAAMLAAQDVAQR Unmodified 1921.884 0.88399055 1363 A0A2R8Y811;P62263;E5RH77 RPS14 40S ribosomal protein S14 yes no 0 0 0 5 0 1 58.079 58.135 3 0.00017874 17178 20230619_1885_Aki_TMTPro18x_K_F5 80.975 70.159 22612 17635 29537 30971 22355 19745 26623 20315 15185 120040 131580 157500 182710 142360 66794 154880 151820 213280 20956 16252 29321 30016 23812 20859 26341 23415 21172 116930 131760 157540 179250 148150 75156 158410 144860 201730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45989000 3680 1363 3507 6791 5577 5577 1 9606 Homo sapiens -0.04007608635265569 DETAVQDYHGHK Unmodified 1398.6164 0.61640654 3598 P48147;Q9UM02;B2RAH7 PREP Prolyl endopeptidase yes no 0 0 0 2 0 1 33.256 33.314 4 0.00016558 7012 20230619_1881_Aki_TMTPro18x_K_F2 100.93 78.733 19808 14982 16416 18352 21306 24149 25142 22545 29485 21690 24970 26775 28226 23876 22084 21690 29050 29048 18281 13749 17049 18331 21863 23940 25241 23125 29584 22140 25980 26842 28419 24618 22944 22248 27728 27512 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18354000 3681 3598 3508 6792 5578 5578 1 9606 Homo sapiens -0.0669570066088454 DETEFYLGK Unmodified 1100.5026 0.50260556 2764 C9K025;P18077;F8WBS5;F8WB72 RPL35A 60S ribosomal protein L35a yes no 0 0 0 3.5 0.957 1 2 2 1 54.567 54.603 2;3 1.0117E-08 16188 20230619_1882_Aki_TMTPro18x_K_F3 214.64 158.23 1103700 771240 921090 1037500 965640 1143500 1177400 1068000 1324300 1295500 1025800 1079800 1540700 1111900 977270 1622300 1417700 1384900 1018300 708690 952450 1027000 1006300 1146200 1178800 1102500 1330100 1290900 1088900 1107600 1528600 1173700 1031500 1606700 1351900 1318000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3209499999.9999995 3682 2764 3509 6793;6794;6795;6796;6797;6798 5579;5580 5579 2 9606 Homo sapiens -0.043625637557852315 DETEFYLGKR Unmodified 1256.6037 0.60371659 2764 C9K025;P18077;F8WBS5;F8WB72 RPL35A 60S ribosomal protein L35a yes no 0 0 1 5 0.816 1 1 1 47.208 47.274 3 0.00067067 12560 20230619_1885_Aki_TMTPro18x_K_F5 97.813 71.107 147890 157190 146250 135710 167250 150850 161310 163060 153630 156540 166180 135020 156260 121040 163520 132300 138130 117950 136990 143650 148910 139230 171590 151900 162810 165520 157500 157850 169310 137650 160000 125970 164570 132100 132270 112260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 684150000 3683 2764 3510 6799;6800;6801 5581 5581 1 9606 Homo sapiens -0.014321120530894405 DETGELSSADEK Unmodified 1279.5416 0.54156984 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 1 0 1 41.978 41.978 2 0.0041695 10953 20230619_1880_Aki_TMTPro18x_K_F1 85.355 57.342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3684 462 3511 6802 5582 5582 1 9606 Homo sapiens -0.0870192798277003 DETMSPSTAFQVK Unmodified 1439.6602 0.66024519 120 A0A024R104;Q12860-2;Q12860 CNTN1 Contactin-1 yes no 0 0 0 4.5 0.5 1 1 52.701 52.748 3 1.9998E-05 14894 20230619_1885_Aki_TMTPro18x_K_F5 99.011 77.138 50562 40689 52214 45026 29010 39412 40082 40313 49806 52823 58791 61284 62218 56141 54045 69516 66062 70446 46762 37295 52510 45082 32336 40303 40125 41475 50548 52971 60055 61673 63033 58768 55852 69647 63122 66884 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59896000 3685 120 3512 6803;6804 5583 5583 1 9606 Homo sapiens -0.0419985227874804 DETNYGIPQR Unmodified 1191.552 0.55201537 2907 P63244;E9KL35;D6RAC2;D6REE5;D6RHH4;D6R9L0;D6R9Z1;D6RFX4;B4DVD2;D6RFZ9;D6RBD0;E9PD14;D6RAU2;B4E0C3;B4DWC6;D6RGK8;D6R909 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 40.328 40.378 2 3.9496E-06 9720 20230619_1882_Aki_TMTPro18x_K_F3 168.8 136.58 382510 270590 310840 352340 374790 422440 383180 363960 483460 489530 544610 514020 590860 472750 401920 573750 588070 550650 352850 248540 322950 349910 384880 420480 388920 379250 489370 488880 557410 519520 592510 494460 423230 573160 560610 523390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1444800000 3686 2907 3513 6805;6806 5584 5584 1 9606 Homo sapiens -0.03609855747004076 DETTCISQDTR Unmodified 1324.5565 0.5565084 4211 Q8IYB7;B4DI15;Q8IYB7-3;Q8IYB7-2;Q8IYB7-4 DIS3L2 DIS3-like exonuclease 2 yes no 0 0 0 1 0 1 35.391 35.391 2 6.3798E-12 8156 20230619_1880_Aki_TMTPro18x_K_F1 202.96 164.66 21351 11164 19206 18420 19631 24935 16876 21097 31479 26204 29904 42695 42033 37741 21103 28269 54391 46000 19681 10299 19688 18082 20348 24612 17641 21946 31175 26730 31338 42363 41570 38601 23693 29535 51661 43534 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18131000 3687 4211 3514 6807 5585 5585 1 9606 Homo sapiens -0.09278759386415913 DETVSDCSPHIANIGR Unmodified 1769.8003 0.80026092 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;B1AK85;Q7L4N0 CAPZB F-actin-capping protein subunit beta yes no 0 0 0 2.5 0.5 1 1 41.326 41.394 3 2.896E-34 10176 20230619_1882_Aki_TMTPro18x_K_F3 261.79 244.39 207420 121120 173710 194130 197690 219210 193460 215700 239760 225250 209240 240640 264960 221240 166590 260940 281740 290430 191200 111630 179730 190270 203510 219570 196790 220780 240540 227630 218640 242880 264090 231030 178000 262930 268510 275510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 551680000 3688 1434 3515 6808;6809 5586;5587 5587 2 9606 Homo sapiens -0.053847200122845607 DEVAHTLTENR Unmodified 1283.6106 0.61059288 1735 P31749;A0A804HJM6;B0LPE5;B3KVH4;P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase yes no 0 0 0 1.5 0.5 1 1 36.225 36.254 3 5.0913E-09 8209 20230619_1881_Aki_TMTPro18x_K_F2 150.86 129.46 20220 15825 19010 19003 19931 24252 22945 25332 26481 31040 32966 38775 38256 34000 28906 36525 49025 48101 18682 14517 19431 19005 20734 24144 23081 25943 27059 31287 33779 38830 38463 35372 30707 37286 46705 45568 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90470000 3689 1735 3516 6810;6811 5588 5588 1 9606 Homo sapiens -0.019867991725504908 DEVQELR Unmodified 887.43486 0.43486035 785 Q14155-5;A0A8V8TQ72;Q14155-1;A0A2R8YG42;B7Z6G2;B1ALK7;A0A024RDY9 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes no 0 0 0 1 0 1 37.369 37.369 2 0.024962 8941 20230619_1880_Aki_TMTPro18x_K_F1 98.523 29.14 38342 27676 30493 34993 37331 42985 41520 39236 59802 42952 50411 59371 48733 46794 38957 49180 71560 60483 35368 25411 31766 34835 38414 42766 42157 40453 59444 43747 52130 59067 49408 48790 41635 49987 68076 57368 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31335000 3690 785 3517 6812 5589 5589 1 9606 Homo sapiens -0.013359688959440064 DEWLRPEDLPIK Unmodified 1509.7827 0.78274359 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 1 5 1 1 1 58.366 58.401 3 2.2106E-05 17433 20230619_1886_Aki_TMTPro18x_K_F6 128.31 106.26 335120 243070 298990 350170 269040 381800 354010 337220 422520 370150 363540 463880 448880 415360 500950 460810 457660 585180 309380 223490 306720 345050 284940 382320 354060 348630 424140 375360 380430 464750 458120 432460 505910 469400 439190 554020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 210590000 3691 3609 3518 6813;6814 5590;5591;5592 5592 3 9606 Homo sapiens 0.048243525149928246 DEYRQDYDAGR Unmodified 1386.58 0.58002103 3633 P52298;P52298-3;C9JQX9;B3KSB0;P52298-2 NCBP2 Nuclear cap-binding protein subunit 2 yes no 0 0 1 1.5 0.5 1 1 32.658 32.688 3 3.5846E-08 6758 20230619_1881_Aki_TMTPro18x_K_F2 169.82 161.42 82334 63170 81170 95955 106020 119070 110080 102740 130510 121840 135930 134060 132910 122500 108230 135040 149580 141780 76094 58106 83033 94437 108300 118230 111340 106610 131990 122530 139030 135170 134670 127360 112910 135810 142660 134620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127360000 3692 3633 3519 6815;6816 5593;5594 5594 2 9606 Homo sapiens -0.09780577557580727 DFAAEVVHPGDLK Unmodified 1396.6987 0.69867961 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 0 5 0.816 1 1 1 52.283 52.341 3 7.8254E-08 14751 20230619_1885_Aki_TMTPro18x_K_F5 124.51 74.37 827830 695740 794200 872370 676030 782720 805680 807130 1016900 951720 1010100 1074700 1018300 843280 1141800 1098700 1049300 1230600 765340 638360 808260 865340 715710 798860 811630 827090 1023500 957830 1037800 1077500 1044700 891270 1153600 1107500 1006100 1166700 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 714960000 3693 1102 3520 6817;6818;6819 5595;5596;5597;5598 5598 4 9606 Homo sapiens 0.016198214180803916 DFAIDIIK Unmodified 933.51713 0.51713341 3922 Q15181;V9HWB5 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 0 0 5.5 1.12 1 1 1 1 61.62 61.656 2 0.0016547 18857 20230619_1886_Aki_TMTPro18x_K_F6 139.19 81.627 886340 812330 730410 892230 683210 821960 728840 799530 1052300 1054200 1040300 1036500 1104700 911670 868490 1262700 1116500 1232900 818990 744170 755170 893680 716220 836220 742580 825200 1053600 1051300 1070300 1049100 1114200 963260 903240 1260300 1066700 1170900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 835980000 3694 3922 3521 6820;6821;6822;6823 5599;5600 5599 2 9606 Homo sapiens 0.047715531829908286 DFALDSEESR Unmodified 1167.5044 0.50439648 1957 A5YKK6;A5YKK6-2;A5YKK6-3;A5YKK6-4;B4DYL7;H3BNB1;H3BTH2 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 1 0 1 45.122 45.122 2 8.1571E-07 12344 20230619_1880_Aki_TMTPro18x_K_F1 182.39 150.86 43364 34751 37172 41309 45759 49804 41029 44627 60134 53215 61286 64074 63123 57911 43584 64345 73188 72174 40045 31874 38424 41289 46773 49606 42243 46168 60207 53678 62886 64346 63496 60266 46410 64933 69733 68472 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123540000 3695 1957 3522 6824 5601 5601 1 9606 Homo sapiens -0.0726555473784174 DFAPPGQQK Unmodified 986.48214 0.48214489 2275 B4E1S3;B2R9T9;Q9BVC6 TMEM109 Transmembrane protein 109 yes no 0 0 0 6 0 1 43.394 43.487 2 0.0056732 10994 20230619_1886_Aki_TMTPro18x_K_F6 85.212 27.931 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3696 2275 3523 6825 5602 5602 1 9606 Homo sapiens -0.011636896249569872 DFAVGICNK Unmodified 1022.4855 0.48551571 4602 Q9NVH2-4;Q9NVH2-3;Q9NVH2-2;Q9NVH2;D3DT96 INTS7 Integrator complex subunit 7 yes no 0 0 0 7 0 1 51.293 51.371 2 0.027768 14226 20230619_1887_Aki_TMTPro18x_K_F7 82.279 13.433 41915 30799 37928 43215 46829 57223 43989 44080 52012 46981 49599 47113 53668 38250 49578 55453 50795 54580 38703 28308 39031 42776 47927 56472 44766 46013 52439 47348 51165 47552 54400 40693 50588 55378 48615 51835 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13947000 3697 4602 3524 6826 5603 5603 1 9606 Homo sapiens -0.02482762842601005 DFAYGETDPLIR Unmodified 1395.667 0.66704513 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 2.5 0.5 1 1 55.861 55.902 2 2.4781E-13 16725 20230619_1882_Aki_TMTPro18x_K_F3 215.06 173.61 99789 75768 87720 106070 97233 126190 95536 92619 121300 135090 137520 150880 145280 138570 140530 164480 148880 181550 92138 69630 90382 104810 100430 125240 97240 98103 122860 134760 140770 152000 147900 144670 143590 165750 142600 172140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131700000 3698 307 3525 6827;6828 5604;5605 5605 2 9606 Homo sapiens -0.01496171335861618 DFAYGETDPLIRK Unmodified 1523.762 0.76200815 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 1 6 0 1 52.175 52.252 3 0.00071902 14900 20230619_1886_Aki_TMTPro18x_K_F6 90.412 75.722 71287 70722 71379 69280 79530 81254 68675 77113 90340 86567 88155 83475 86368 78675 97270 91497 88636 101630 66005 64709 72590 70299 81660 81225 70590 79280 90744 86904 90467 84741 88748 81995 98216 92326 84979 96378 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55293000 3699 307 3526 6829 5606 5606 1 9606 Homo sapiens 0.021077621353015275 DFCLNEINK Unmodified 1151.5281 0.5281088 2115 A8K869 yes yes 0 0 0 1 0 1 49.938 49.938 3 0.011921 14321 20230619_1880_Aki_TMTPro18x_K_F1 64.711 16.288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3700 2115 3527 6830 5607 5607 1 9606 Homo sapiens -0.04159412505032378 DFCSQSCLSTYELK Unmodified 1736.7386 0.73857187 4082 Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3 ZMYM4 Zinc finger MYM-type protein 4 yes no 0 0 0 6 0 1 56.413 56.487 3 0.0013474 16587 20230619_1886_Aki_TMTPro18x_K_F6 75.02 65.49 48317 34414 44919 44463 49398 56737 62003 59702 64848 58956 60906 70391 70808 58075 64855 71935 77109 76017 44615 31607 45994 44248 51307 56492 61854 60758 65737 59969 63184 70511 71672 61053 66766 72273 73652 72162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1704399999.9999998 3701 4082 3528 6831 5608 5608 1 9606 Homo sapiens -0.10032787755812933 DFDPVHGDVIK Unmodified 1240.6088 0.60880197 2023;3404 A8K379;P07948;B4DQ79;Q6NUK7;P07948-2 LYN Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lyn no no 0 0 0 4 0 1 49.423 49.457 3 4.4564E-05 13729 20230619_1883_Aki_TMTPro18x_K_F4 118.48 79.465 241850 219850 219950 261480 216020 255210 216190 219860 259750 257330 327500 293350 275870 276820 272130 298620 296880 337160 223620 201560 225430 260510 224950 257750 219470 228160 264720 259230 330320 295800 283280 287100 278320 301830 284090 319680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233630000 3702 2023;3404 3529 6832 5609 5609 1 9606 Homo sapiens -0.0018780819050334685 DFDTALK Unmodified 808.39668 0.39668393 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 4.33 1.11 2 1 2 1 49.578 49.645 2;3 0.011051 13822 20230619_1883_Aki_TMTPro18x_K_F4 117.16 68.986 1783200 1449000 1663700 1887800 1747100 1878100 1734100 1805500 2307100 2325200 2548000 2515400 2398200 2086400 1977000 2630700 2847700 2678800 1647900 1330200 1702400 1869900 1808700 1898400 1767700 1863600 2327600 2327900 2595300 2530800 2433500 2194900 2069300 2635600 2715000 2544400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 933150000 3703 2088 3530 6833;6834;6835;6836;6837;6838 5610;5611;5612 5611 3 9606 Homo sapiens -0.015178548106177914 DFDWNLK Unmodified 936.43413 0.43413207 2661;881 Q96MZ5;A0A087X0Q1;Q7Z739;Q8NA80;A0A024R7W5;B4DPX9;A0A087WY31;Q658Z6;Q8N3V9;B5BU99;Q9Y5A9;Q9Y5A9-2 YTHDF3;DKFZp451J085;DKFZp451A052;YTHDF2 YTH domain-containing family protein 3;YTH domain-containing family protein 2 no no 0 0 0 6 0 1 58.643 58.708 3 0.0020775 17608 20230619_1886_Aki_TMTPro18x_K_F6 119.89 98.359 38139 35445 41011 44424 36137 45930 41232 40949 47954 49834 44246 41046 52285 40508 41320 51593 48674 50898 35318 32511 41374 44140 38105 46204 41499 42419 48360 49628 45892 42062 52566 42420 42673 51597 46515 48342 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31832000 3704 881;2661 3531 6839 5613 5613 1 9606 Homo sapiens -0.036627635450145135 DFEELKAEEVDVTK Unmodified 1650.7988 0.79884716 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 1 3 0.816 1 1 1 56.601 56.621 3;4 5.0384E-05 16901 20230619_1883_Aki_TMTPro18x_K_F4 105.46 81.407 250530 213700 254440 285110 238600 253410 260640 255970 258750 315600 335850 282390 281930 249870 354020 248590 256430 214270 231750 196200 258070 281600 249530 258740 261620 263000 266950 314610 338400 287070 292750 258680 352740 248340 246000 204030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1609899999.9999998 3705 630 3532 6840;6841;6842 5614;5615 5615 2 9606 Homo sapiens -0.0005203082946536597 DFEEMRK Unmodified 953.42767 0.42766648 564 A0A024R9B7;P09669 COX6C Cytochrome c oxidase subunit 6C yes no 0 0 1 3.5 0.5 1 1 41.458 41.51 3 0.019221 10249 20230619_1882_Aki_TMTPro18x_K_F3 76.774 35.472 571260 485200 600830 681490 873580 837020 906650 859060 1102200 530500 734860 724130 727370 614860 642750 695300 801680 665150 528580 445720 612530 673920 885760 835100 917490 867450 1094900 560670 770790 723290 738890 641870 664070 695690 764560 632580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 390650000 3706 564 3533 6843;6844 5616;5617 5616 2 9606 Homo sapiens -0.05091024768023544 DFEEYPEHR Unmodified 1220.5098 0.5098162 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V488;B7ZB16;B4DR01;B3KWD0 XPO1 Exportin-1 yes no 0 0 0 1.5 0.5 1 1 37.697 37.727 3 3.6818E-06 9039 20230619_1880_Aki_TMTPro18x_K_F1 169.77 153.14 143030 110260 136030 135890 154660 144390 157210 142630 179950 163310 164100 169360 168970 151030 154760 171000 192900 186480 132160 101180 139020 135270 159060 145410 159040 146430 181410 164170 169370 171010 171720 157450 159800 172340 184150 176980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 512950000 3707 3228 3534 6845;6846 5618;5619 5618 2 9606 Homo sapiens -0.09161831155392974 DFEPQPGNMSHPR Oxidation (M) 1526.6572 0.6572255 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 1 0 3 0 1 33.443 33.509 3 0.00094011 6989 20230619_1882_Aki_TMTPro18x_K_F3 82.437 75.555 10416 7937.7 10780 11589 12883 12329 10947 12227 16207 12916 14990 15410 15992 11028 10847 12249 13751 17649 9629.8 7298.1 10953 11409 13157 12410 11316 12515 16156 13096 15473 15376 16028 11605 11290 12586 13156 16692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36187000 3708 1601 3535 6847 5620 5620 1041 1 9606 Homo sapiens -0.08503682612899865 DFEPYDFTLDD Unmodified 1375.5456 0.54559259 1125 A0A0S2Z5E9;Q69YN2-3;Q69YN2;D3DR67;Q69YN2-2 CWF19L1 CWF19-like protein 1 yes no 0 0 0 1 0 1 65.141 65.141 2 0.0022837 20573 20230619_1880_Aki_TMTPro18x_K_F1 94.302 87.096 20667 15294 15361 16443 16315 20228 15132 19075 16655 21044 22779 22103 27085 23676 20174 26941 21424 31210 19058 14020 16065 16568 16874 20140 15394 19604 17150 21189 23260 22458 27177 24549 20746 27237 20554 29562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36299000 3709 1125 3536 6848 5621 5621 1 9606 Homo sapiens -0.12715838489043563 DFEQISK Unmodified 865.41815 0.41814765 2353 Q53GG3;B3KN57;B3KML1;O60749;O60749-2 SNX2 Sorting nexin-2 yes no 0 0 0 4 0 1 47.316 47.358 2 0.027812 12772 20230619_1883_Aki_TMTPro18x_K_F4 89.698 3.3661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3710 2353 3537 6849 5622 5622 1 9606 Homo sapiens -0.01994469781902808 DFESHITSYK Unmodified 1225.5615 0.56151742 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4E2Z6;Q3B7B9;H3BPE3 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 6 0 1 46.146 46.229 3 0.00012144 12227 20230619_1886_Aki_TMTPro18x_K_F6 113.44 108.46 344390 265720 333310 367430 363790 416120 374930 380440 394850 428590 473680 452550 469540 370080 376620 432760 479890 527260 318250 244150 340190 363210 375870 416160 378160 392410 404420 431200 481850 455560 474760 388090 390630 438960 458490 499620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206800000 3711 12 3538 6850 5623 5623 1 9606 Homo sapiens -0.042240874614890345 DFESSGLDR Unmodified 1024.4462 0.44615331 3943 Q15814 TBCC Tubulin-specific chaperone C yes yes 0 0 0 1.5 0.5 1 1 41.982 42.022 2 8.6508E-06 10966 20230619_1880_Aki_TMTPro18x_K_F1 176.43 137.13 94623 67956 84347 99945 111640 121880 97849 99307 142780 109830 139240 144920 141800 122740 122310 113250 155220 143090 87350 62501 87034 98515 113540 121040 100840 103310 142650 111600 143140 144730 143750 126850 126470 115670 148110 135640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84333000 3712 3943 3539 6851;6852 5624 5624 1 9606 Homo sapiens -0.06509191592465413 DFFLANASR Unmodified 1039.5087 0.50869399 326 A0A024R5A3;A0A024R580;B2RDI5;P07384;B4DWH5 CAPN1 Calpain-1 catalytic subunit yes no 0 0 0 8 0 1 53.118 53.192 2 0.0047643 14930 20230619_1888_Aki_TMTPro18x_K_F8 104.89 67.735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3713 326 3540 6853 5625 5625 1 9606 Homo sapiens -0.009480007336378549 DFFQSYGNVVELR Unmodified 1572.7573 0.75725712 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7I2V5M7;B7Z8K4;Q6ZP53;A0A7I2YQH0 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 7 0.816 1 1 1 62.043 62.082 2 1.9449E-15 18736 20230619_1887_Aki_TMTPro18x_K_F7 220.66 189.58 602550 537690 531680 652530 592690 642290 625290 626910 827830 817880 744980 733980 817140 643900 713840 806860 701590 805140 556930 493080 547620 649310 612100 650070 634750 646660 828970 813890 771230 745730 826380 676150 727580 807840 672110 764370 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1498799999.9999998 3714 3846 3541 6854;6855;6856 5626;5627 5626 2 9606 Homo sapiens -0.006211220074646917 DFFTSGSPEETAFR Unmodified 1589.6998 0.69980182 2865 O60313-2;E5KLM1;O60313;C9JMB8;A0A2R8YDM2;E5KLM2;A0A2R8YE78;A0A2R8YD53;A0A2R8YGE5;A0A2R8Y4Q3;A0A2R8Y4G4;A0A2R8Y5G3;C9JY58 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 3.5 0.5 1 1 57.365 57.384 2 1.0451E-15 17236 20230619_1883_Aki_TMTPro18x_K_F4 237.53 223.29 26163 22994 26345 32201 29690 34714 38403 31773 44950 32449 30338 31253 34831 33842 35852 37772 34116 41676 24205 21119 26845 31777 30825 34831 38378 32703 44805 32762 32030 31878 35489 35024 36356 38107 32711 39515 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55476000 3715 2865 3542 6857;6858 5628 5628 1 9606 Homo sapiens -0.07146009003668041 DFGAQREEGR Unmodified 1163.5319 0.53194863 3589 P46087;P46087-4;P46087-2;P46087-3;F5GYR3 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 1 1 0 1 30.404 30.404 3 0.044278 6167 20230619_1880_Aki_TMTPro18x_K_F1 44.612 20.761 19612 16545 21656 20054 25102 25076 24439 27934 34884 25555 27283 27354 35835 30662 24811 29625 33299 31931 18154 15175 21869 20042 25775 25046 25005 28257 34625 26033 28710 27809 35790 31468 25916 29906 31769 30309 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10648000 3716 3589 3543 6859 5629 5629 1 9606 Homo sapiens -0.04327606686956642 DFGIQPVEDK Unmodified 1146.5557 0.55570376 4355 Q96GX2 ATXN7L3B Putative ataxin-7-like protein 3B yes yes 0 0 0 2.5 0.5 1 1 52.327 52.379 2 0.00035318 15195 20230619_1882_Aki_TMTPro18x_K_F3 130.01 79.966 220150 191130 222660 237620 231590 266300 252760 238250 285680 242930 226530 202780 229680 184740 201190 228990 219820 203690 203670 175340 226220 236510 240500 266440 254600 245500 286770 244160 235170 207130 232920 193560 206260 227930 210030 193800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55355000 3717 4355 3544 6860;6861 5630;5631 5630 2 9606 Homo sapiens -0.011711859731576624 DFGPIDPECTCPTCQK Unmodified 1923.7801 0.7801191 4465 Q9BXR0;B2RAR3;K7EL95;Q71RF8 QTRT1 Queuine tRNA-ribosyltransferase yes no 0 0 0 4 0 1 53.291 53.311 3 4.2896E-08 15482 20230619_1883_Aki_TMTPro18x_K_F4 126.71 122.46 54745 44240 48102 48717 40621 46091 49749 43701 50962 59928 60011 61945 64586 56024 58259 76374 63457 73795 50566 40548 49306 48819 43050 46774 49683 45275 52253 59746 61363 62611 65478 59053 59746 76218 60737 70080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68380000 3718 4465 3545 6862 5632 5632 1 9606 Homo sapiens -0.14481975058811258 DFHILFVPR Unmodified 1142.6237 0.62366417 1374 H3BMM5;B2RDH6;A0A2R8YF87;Q96AX1;F5H6Y0 VPS33A Vacuolar protein sorting-associated protein 33A yes no 0 0 0 2 0 1 56.449 56.467 3 0.0024628 17204 20230619_1881_Aki_TMTPro18x_K_F2 87.476 64.835 9171.2 4857.3 9130.7 10817 9207.3 10286 9139.4 11284 9300.1 12261 10488 9749.1 13502 8805.6 9433.3 13825 10589 11273 8461.4 4501.6 9289 10416 9555.6 10453 9234.7 11478 9534.3 12253 10828 9986.7 13472 9391 9752.5 13655 10125 10732 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20871000 3719 1374 3546 6863 5633 5633 1 9606 Homo sapiens 0.058057284681808596 DFHKDEVR Unmodified 1044.4989 0.49885759 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 1 3.5 0.5 1 1 34.096 34.156 4 0.012434 7227 20230619_1882_Aki_TMTPro18x_K_F3 90.696 69.024 598050 33021 450240 558360 810690 328130 615590 680090 931570 712630 833200 578030 606900 450920 432150 375200 339270 295500 548650 35735 474990 516810 804780 357740 641540 671130 926440 714380 847260 588760 617500 465620 437100 374260 325210 281670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 213640000 3720 1182 3547 6864;6865 5634;5635;5636 5634 3 9606 Homo sapiens -0.021611887390008633 DFHLIQANK Unmodified 1084.5665 0.56654322 4220 Q8N108-19;Q8N108-16;Q8N108-14;Q8N108-18;Q8N108-17;Q8N108-15;Q8N108;Q8N108-13;Q8N108-12 MIER1 Mesoderm induction early response protein 1 yes no 0 0 0 8 0 1 47.01 47.059 3 0.0046849 12318 20230619_1888_Aki_TMTPro18x_K_F8 73.233 55.073 71927 40675 58507 64085 71797 72381 77080 79563 98840 67340 71722 77498 78077 61791 66745 81476 73219 77990 66278 37485 60781 62883 73678 72705 78051 80446 98285 69063 75169 77700 78931 65304 68512 81321 70026 74094 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27454000 3721 4220 3548 6866 5637 5637 1 9606 Homo sapiens 0.027642611918054172 DFHVDEQTTVK Unmodified 1317.6201 0.62009493 2785 CON__P34955 yes yes 0 0 0 3 0.816 1 1 1 43.27 43.335 3 5.2218E-05 11000 20230619_1883_Aki_TMTPro18x_K_F4 130.56 106.81 + 150180 110950 166990 152140 251350 226390 208630 211280 329020 158390 195150 214710 148030 133600 163690 160610 176170 210770 138910 101950 169360 151240 253030 223010 216390 215410 322430 164930 204560 212610 153450 141910 166870 163770 168680 199540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 459330000 3722 2785 3549 6867;6868;6869 5638 5638 1 -0.026010308870354493 DFIDSLGLLHEQNMAK Oxidation (M) 1845.8931 0.89309867 4152 Q7L2H7;Q7L2H7-2;H0YCQ8 EIF3M Eukaryotic translation initiation factor 3 subunit M yes no 0 1 0 6 0 1 60.916 60.974 3 1.1784E-08 18501 20230619_1886_Aki_TMTPro18x_K_F6 138.91 119.15 255610 212430 235270 271580 275400 245550 270270 266350 269100 308890 303540 285140 303270 245760 275910 353420 285710 332230 236220 194960 241420 269050 282270 250930 272840 271860 275860 309030 309690 289380 308120 260560 282050 351980 273590 315610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 481720000 3723 4152 3550 6870 5639;5640 5639 2678 2 9606 Homo sapiens 0.003987847210510154 DFIDSLGLLHEQNMAK Unmodified 1829.8982 0.89818405 4152 Q7L2H7;Q7L2H7-2;H0YCQ8 EIF3M Eukaryotic translation initiation factor 3 subunit M yes no 0 0 0 6.5 0.5 1 1 61.888 61.934 3 5.9873E-15 18662 20230619_1887_Aki_TMTPro18x_K_F7 166.09 152.86 717740 624070 675970 874660 593190 786340 755730 799320 898240 1074900 973110 899210 1055400 813250 811550 1163500 1114800 964660 663620 573220 690290 861090 628360 801680 757260 823050 910990 1065900 997670 918280 1062600 860520 848160 1151400 1062600 918890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 935100000 3724 4152 3550 6871;6872 5641 5641 1 9606 Homo sapiens 0.016430885836825837 DFIIFEAAPQETR Unmodified 1535.762 0.76200815 374 Q5U086;A0A024R625;P60510;H3BTA2 PPP4C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 4 catalytic subunit yes no 0 0 0 3.5 0.5 1 1 61.779 61.795 3 1.8253E-06 19162 20230619_1882_Aki_TMTPro18x_K_F3 112.08 98.421 61019 52658 61881 62520 58216 56315 68168 66767 68994 67575 67640 64467 73543 57419 70752 78537 73154 77180 56449 48285 62730 62278 60944 57689 68196 67520 70201 68139 69715 65390 74706 60608 72172 78480 69998 73306 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115400000 3725 374 3551 6873;6874 5642;5643 5642 2 9606 Homo sapiens 0.01555762135308214 DFIILSCVR Unmodified 1121.5903 0.59031513 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A8A5YP40;B3KY55 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 1 0 1 60.093 60.093 2 0.00237 18581 20230619_1880_Aki_TMTPro18x_K_F1 125.98 98.494 60495 55727 62361 60833 58693 84523 67012 77784 96640 37343 37193 36465 37875 33648 50588 37264 38088 37651 55996 51048 63155 61352 61684 83462 67989 78801 94202 39996 41009 37002 39267 34990 50453 37458 36560 35759 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27230000 3726 462 3552 6875 5644 5644 1 9606 Homo sapiens 0.03438358633934513 DFILPISDVR Unmodified 1173.6394 0.63937381 824 A0A087WVM4;B7ZM99;Q6UB35;B2RD24;Q4VXM1;Q4VXM0;Q8WX68 MTHFD1L;bA251O17.4 Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes no 0 0 0 6 0 1 61.699 61.754 2 0.0032026 18903 20230619_1886_Aki_TMTPro18x_K_F6 109.29 80.778 111730 88367 85784 99422 87760 97090 102160 101530 121560 107590 102700 117950 127250 103190 116430 123670 117180 139890 103090 81014 89412 99492 91480 98486 102760 103600 121990 108750 107450 118740 128550 108060 118670 124830 112260 132610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80358000 3727 824 3553 6876 5645 5645 1 9606 Homo sapiens 0.05949970194569687 DFIYQNPHIFK Unmodified 1420.7139 0.71393574 2611 B4DWB1;O60678;B4DP44;Q8WUV3;O60678-2 PRMT3 Protein arginine N-methyltransferase 3 yes no 0 0 0 2 0 1 54.681 54.705 3 0.086284 16488 20230619_1881_Aki_TMTPro18x_K_F2 37.613 23.934 79445 65246 80574 85050 77583 83545 86331 79164 94032 103970 89726 101710 104890 82000 106100 108900 109020 113310 73471 59895 81734 84238 81034 84505 86781 81875 95293 103650 93040 102630 106580 86707 108040 109240 104310 107560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89025000 3728 2611 3554 6877 5646 5646 1 9606 Homo sapiens 0.020407330059242668 DFKPGDLIFAK Unmodified 1249.6707 0.67067394 3306 O75475;Q05CM9;O75475-3;O75475-2;Q8N4N4 PSIP1 PC4 and SFRS1-interacting protein yes no 0 0 1 1.5 0.5 1 1 59.683 59.69 3 0.00071806 18445 20230619_1881_Aki_TMTPro18x_K_F2 95.428 65.097 472690 444200 455120 484430 432010 470720 457770 442570 423860 524520 512700 477880 478120 436270 564460 467380 444100 474080 437360 406870 463560 485910 451090 476630 459300 456410 437780 524080 520390 485750 493150 452990 565300 469940 426280 450100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 821080000 3729 3306 3555 6878;6879 5647 5647 1 9606 Homo sapiens 0.05582543228661052 DFLAGGIAAAISK Unmodified 1232.6765 0.6764876 3439 P12236;Q6I9V5;Q59EI9 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes no 0 0 0 2.67 0.471 1 2 62.88 62.899 2;3 2.6159E-07 19939 20230619_1881_Aki_TMTPro18x_K_F2 174.84 136.6 70940 62079 74676 73259 75689 72376 83947 91549 104600 86092 71541 68942 71136 57618 88860 66417 66462 49603 65653 56917 75545 73104 78685 73730 84804 92012 104060 86781 74967 70351 73426 60275 88680 65754 63690 47353 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 328670000 3730 3439 3556 6880;6881;6882 5648;5649 5648 2 9606 Homo sapiens 0.06945641740298925 DFLAGGVAAAVSK Unmodified 1204.6452 0.64518747 1072 A0A0S2Z3H3;P12235;A8K787;V9GYG0;A0A0S2Z359;A0A0S2Z3C4 SLC25A4 ADP/ATP translocase 1 yes no 0 0 0 1.67 0.471 1 2 59.534 59.54 2;3 0.0013225 18426 20230619_1881_Aki_TMTPro18x_K_F2 89.231 67.858 30469 26329 30338 31901 27609 33326 33553 31868 35906 31869 27631 31773 32730 24991 32833 29421 29807 33810 28182 24147 30802 31781 29073 33553 33557 32667 36121 32208 29002 32005 33227 26260 33200 29751 28576 32052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32776000 3731 1072 3557 6883;6884;6885 5650;5651 5651 2 9606 Homo sapiens 0.05105068706234306 DFLEAVNK Unmodified 934.476 0.47599688 1235 C9JX88;A0A140VK70;P35998;Q75L23;P35998-2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 6 0 1 55.526 55.602 2 0.0002493 16274 20230619_1886_Aki_TMTPro18x_K_F6 139.19 83.803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3732 1235 3558 6886 5652 5652 1 9606 Homo sapiens 0.006137921435083626 DFLFPHLR Unmodified 1043.5553 0.55525025 1761 A0A8I5KY07;A0A8I5KRP1;A0A8I5KRK1;A0A8I5KYQ0;A0A8I5KZB3;Q9H2M9;A0A8I5QJC9;A0A8I5KSQ5;A0A8I5QJG4;A0A8I5KUS2;Q9H2M9-2;F8WDJ2 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 2 0 1 54.505 54.529 3 0.00027958 16370 20230619_1881_Aki_TMTPro18x_K_F2 138.9 113.34 25443 17541 26190 25624 26804 27215 24952 25423 35680 31747 31704 27009 35036 32294 35345 37254 25242 27108 23509 16135 26541 25230 27743 27359 25605 26262 35584 31626 32834 27842 35670 33377 35392 36793 24262 25848 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87326000 3733 1761 3559 6887 5653 5653 1 9606 Homo sapiens 0.03521483888312105 DFLHQPPFGETR Unmodified 1442.6943 0.69426293 3169 K7EQ34;U3KQT6;K7EPA3;Q9NX61-2;Q9NX61 TMEM161A Transmembrane protein 161A yes no 0 0 0 6 0 1 49.991 50.068 3 0.0088146 13939 20230619_1886_Aki_TMTPro18x_K_F6 67.997 55.23 67915 56148 64159 66745 73570 77166 78688 76214 97059 54946 54300 46421 54976 39734 59495 55084 56569 45723 62775 51493 65646 66686 75810 77228 79567 77358 96006 56489 57718 47342 56273 42046 60228 54603 54078 43567 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14793000 3734 3169 3560 6888 5654 5654 1 9606 Homo sapiens -0.009376430048405382 DFLIPIGK Unmodified 901.5273 0.52730417 1402 A0A384MDR8;P11177-3;P11177-2;P11177;C9J634;F8WF02;Q59G68 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes no 0 0 0 1 0 1 62.078 62.078 2 0.0025568 19316 20230619_1880_Aki_TMTPro18x_K_F1 124.83 43.538 161420 140650 160890 181350 154800 172980 191080 194100 215520 193780 178680 170460 194840 161440 189480 212630 198400 215590 149320 129070 163530 179700 162270 176020 191310 196820 216700 195170 185750 173890 198090 169600 193400 212940 189860 204670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109120000 3735 1402 3561 6889 5655 5655 1 9606 Homo sapiens 0.07260160908231228 DFLITQMTGK Unmodified 1152.5849 0.5848954 1906 A1MA90;Q9H9J2 MRPL44 39S ribosomal protein L44, mitochondrial yes no 0 0 0 1 0 1 60.97 60.97 3 0.0013318 18872 20230619_1880_Aki_TMTPro18x_K_F1 90.964 71.57 30852 22074 25804 33338 29468 49753 36368 37812 46180 42364 36587 39644 41397 33334 35797 41957 39329 43399 28467 20309 26761 32918 30668 48725 36556 39556 46115 42506 38217 40138 41825 35065 36730 42086 37624 41190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50412000 3736 1906 3562 6890 5656 5656 1 9606 Homo sapiens 0.014706350514870792 DFLLKPELLR Unmodified 1242.7336 0.73360855 724;3204 Q13838-2;A0A024RCM3;Q13838;Q5STU3;F6WLT2;F6TRA5;Q59G92;A0A0A0MT12;F6S4E6;F6R6M7;F6QYI9;A0A0G2JJL7;Q7KYK3;B4DH55;F6U6E2;A0A286SD52;A0A0G2JHN7;K7EN69;F6S2B7;A0A286SD65;K7EIL8;K7EL56;F6SXL5;K7ENP6;A0A286SD67;A0A286SD68;A0A286SD64;A0A286SD63;A0A286SD59;B4DF34;O00148;B4DX78;O00148-2;K7EQN7;A0A024R7H0;O00148-3;K7EPJ3 DDX39B;hCG_2005638;BAT1;DDX39A;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A no no 0 0 1 2 0 1 59.567 59.58 3 0.00018727 18443 20230619_1881_Aki_TMTPro18x_K_F2 112.94 94.128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3737 724;3204 3563 6891 5657 5657 1 9606 Homo sapiens 0.12195109016693095 DFLLQQTMLR Oxidation (M) 1279.6595 0.65945733 3793 X5DNM4;V9HW62;Q04760-2;Q04760 GLO1;HEL-S-74 Lactoylglutathione lyase yes no 0 1 0 1 0 1 55.769 55.769 3 0.0010365 16731 20230619_1880_Aki_TMTPro18x_K_F1 90.827 54.27 18447 16233 17670 18362 17100 19424 17878 20961 23787 15417 15382 14595 17692 17453 15769 20328 19211 22142 17059 14877 18009 18391 17845 19597 18170 21150 23541 15871 16273 14972 17917 18056 16285 20468 18368 21001 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53134000 3738 3793 3564 6892 5658 5658 2475 1 9606 Homo sapiens 0.030813978628657424 DFLLQQTMLR Unmodified 1263.6645 0.66454271 3793 X5DNM4;V9HW62;Q04760-2;Q04760 GLO1;HEL-S-74 Lactoylglutathione lyase yes no 0 0 0 2 0 1 60.896 60.907 2 1.7511E-05 18989 20230619_1881_Aki_TMTPro18x_K_F2 161.76 132.68 214130 165770 176600 244380 186030 212480 186000 208980 384650 201910 179340 211400 229570 212980 174840 323610 315250 314410 197650 152420 183050 239730 193070 217110 193540 213610 371930 205200 195950 214420 230550 225410 187330 322380 300260 298730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 411180000 3739 3793 3564 6893 5659 5659 1 9606 Homo sapiens 0.04325701725474573 DFLLSLK Unmodified 834.48511 0.485105 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 0 1.5 0.5 1 1 62.329 62.334 2 0.019115 19444 20230619_1880_Aki_TMTPro18x_K_F1 111.82 17.554 45088 34254 41188 38965 34644 40503 39501 43920 46708 45325 48548 50522 46420 36927 49618 49857 46444 51542 41644 31412 42050 39011 36671 40922 39802 44659 47243 45874 49655 50591 47572 39234 50228 49987 44503 48919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82102000 3740 380 3565 6894;6895 5660 5660 1 9606 Homo sapiens 0.0612418549984568 DFLLTAR Unmodified 834.45995 0.45995289 531 A0A024R8P8;P63173;J3KT73;J3QL01;J3KSP2 RPL38 60S ribosomal protein L38 yes no 0 0 0 7 1 1 1 51.702 51.779 2 0.0049029 14658 20230619_1886_Aki_TMTPro18x_K_F6 145.04 75.661 668040 585590 606790 630400 635320 756530 710260 690800 863370 574710 534930 405670 483550 390680 629510 526260 479190 407510 617520 536450 622160 634840 660450 753960 716260 707090 856930 582550 561510 419580 501940 410750 628680 520420 459440 388570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1528199999.9999998 3741 531 3566 6896;6897 5661;5662 5661 2 9606 Homo sapiens 0.03610130697279601 DFLVGQDR Unmodified 948.46649 0.46649483 3899 Q14696 MESDC2 LDLR chaperone MESD yes yes 0 0 0 3.5 0.5 1 1 46.869 46.947 2 0.0021436 12750 20230619_1882_Aki_TMTPro18x_K_F3 131.41 96.113 186180 153390 165380 191000 198120 206830 201780 193110 241820 209930 249620 234950 228170 190050 213680 245030 240670 273310 172000 140750 170370 189980 203300 207670 204450 198730 244240 212090 254690 235980 232850 200480 219220 246820 230240 259170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140060000 3742 3899 3567 6898;6899 5663;5664 5663 2 9606 Homo sapiens -0.009799761420026698 DFMIQGGDFTR Oxidation (M) 1301.571 0.57103625 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45;A0A7P0T7U3 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 1 0 4.5 0.5 1 1 51.355 51.407 2 8.044E-06 14345 20230619_1885_Aki_TMTPro18x_K_F5 146.17 135.02 429320 370900 357840 423680 505900 452820 437770 486550 606890 501450 548770 511140 495850 436360 549080 587290 528250 590530 396570 339970 371920 424000 511600 456830 450570 494950 606100 506430 563280 516280 510390 460520 556520 587800 506060 560630 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 608710000 3743 1716 3568 6900;6901 5665;5666;5667 5666 1115 3 9606 Homo sapiens -0.06768642447627826 DFMIQGGDFTR Unmodified 1285.5761 0.57612163 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45;A0A7P0T7U3 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 0 0 5 0.816 1 1 1 55.373 55.424 2 6.9737E-09 15988 20230619_1885_Aki_TMTPro18x_K_F5 214.82 207.7 618810 524210 587410 564320 517320 658000 633570 624210 870640 739890 720040 709270 733040 628200 784830 802390 748510 853250 572090 480280 598250 568170 547180 657470 639350 643030 867180 741010 746490 718770 750270 660050 795300 806290 717250 809490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1716799999.9999998 3744 1716 3568 6902;6903;6904 5668;5669;5670 5669 3 9606 Homo sapiens -0.05524338584996258 DFMIQGGDPTGTGR Oxidation (M) 1466.646 0.64599211 737 A0A024RCX8;Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase-like 1 yes no 0 1 0 4 0 1 45.731 45.775 2 1.2968E-05 12037 20230619_1883_Aki_TMTPro18x_K_F4 119.74 99.44 37049 31893 32954 40194 42592 43758 39166 40311 43257 42235 45183 47769 47603 41098 41954 47308 56151 51713 34238 29262 34000 39943 43373 43908 39821 41475 43927 42750 46389 48013 48258 42943 43570 47673 53557 49087 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31594000 3745 737 3569 6905 5671 5671 444 1 9606 Homo sapiens -0.06866504707068088 DFMYVSQDPK Oxidation (M) 1244.5383 0.53833914 3658 P55084-2;P55084;B4DY96;B5MD38;F5GZQ3;B4DDC9 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 1 0 4 0 1 48.295 48.335 2 0.030537 13202 20230619_1883_Aki_TMTPro18x_K_F4 89.08 53.784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3746 3658 3570 6906 5672 5672 2365 1 9606 Homo sapiens -0.074148495704776 DFMYVSQDPK Unmodified 1228.5434 0.54342452 3658 P55084-2;P55084;B4DY96;B5MD38;F5GZQ3;B4DDC9 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 5.5 0.5 1 1 52.966 53.04 3 0.00048016 15063 20230619_1885_Aki_TMTPro18x_K_F5 103.18 86.748 135370 109360 135820 135280 142800 174060 166500 174470 185770 182230 177610 174040 185220 157880 170070 197060 193550 193630 125160 100340 138070 135020 148540 173010 167110 178330 187870 183500 182930 176550 188110 165470 174650 197130 184960 183950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135640000 3747 3658 3570 6907;6908 5673;5674 5673 2 9606 Homo sapiens -0.06170545707846031 DFNEECPR Unmodified 1065.4186 0.41855836 963 V9HWF0;A0A0A0MTH3;Q13418;Q13418-3;Q13418-2 HEL-S-28;ILK Integrin-linked protein kinase yes no 0 0 0 1 0 1 36.726 36.726 2 0.071983 8661 20230619_1880_Aki_TMTPro18x_K_F1 61.679 48.642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3748 963 3571 6909 5675 5675 1 9606 Homo sapiens -0.11153418124354175 DFNMPLTISSLK Unmodified 1364.701 0.70098779 758 A0A024RDE8;Q96HC4;B7Z8X5;Q96HC4-7;Q96HC4-4;Q96HC4-6;Q96HC4-3;Q96HC4-2 PDLIM5 PDZ and LIM domain protein 5 yes no 0 0 0 2 0 1 62.817 62.826 3 0.025269 19886 20230619_1881_Aki_TMTPro18x_K_F2 55.841 39.951 63357 52498 62115 57165 43771 56837 61021 59145 70868 69183 61973 65036 71906 66245 61689 80589 77757 76184 58580 48107 62906 57388 47458 57553 60850 60539 71302 69268 64457 66260 72646 69030 63899 80453 74231 72412 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75553000 3749 758 3572 6910 5676 5676 1 9606 Homo sapiens 0.03322533831533292 DFNPTATVK Unmodified 991.49746 0.4974606 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;A0A994J428;B3KRA9;A0A994J4Q4;A0A994J6R6;A0A994J4P6;A0A994J4A4;B1AR62;A0A994J6Q7;A0A994J499 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 6.5 0.5 2 2 47.567 47.652 2;3 0.00013431 12866 20230619_1886_Aki_TMTPro18x_K_F6 166.34 141.52 311020 280550 328200 360230 437530 500130 512760 499250 664350 399240 401620 379440 448560 347470 427310 431270 418320 375860 287910 257410 333980 359040 448090 494910 516820 507240 656910 408780 426370 385280 455180 364010 434390 428990 400040 357730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 763880000 3750 43 3573 6911;6912;6913;6914 5677;5678;5679 5677 3 9606 Homo sapiens 0.001371771722460835 DFNQFIK Unmodified 910.45487 0.45486751 2629;940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370;B7ZAX9;B4DZC0;O60264 SMARCA1;SMARCA5 Probable global transcription activator SNF2L1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 no no 0 0 0 8 0 1 55.194 55.261 2 0.0090673 15824 20230619_1888_Aki_TMTPro18x_K_F8 111.82 17.554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3751 940;2629 3574 6915 5680 5680 1 9606 Homo sapiens -0.00394173165329903 DFNVPLSISR Unmodified 1146.6033 0.60332266 4580 Q9NR12;D6RF83;D6RH06;Q9NR12-3;Q9NR12-5;Q9NR12-6;Q9NR12-4;Q9NR12-2;D6RAN1;H7BYK4 PDLIM7 PDZ and LIM domain protein 7 yes no 0 0 0 1 0 1 55.719 55.719 2 0.040219 16730 20230619_1880_Aki_TMTPro18x_K_F1 67.704 42.532 46842 39317 48780 48886 50824 61025 56952 58878 62888 50581 53551 50571 54463 44036 56512 61871 54312 58158 43335 36072 49433 48749 52827 60718 57255 60059 63322 51581 55419 51167 55641 46590 57340 61662 52014 55264 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31353000 3752 4580 3575 6916 5681 5681 1 9606 Homo sapiens 0.03588513017712103 DFPDLAVLGAA Unmodified 1087.555 0.55497548 4672 Q9UJY4 GGA2 ADP-ribosylation factor-binding protein GGA2 yes yes 0 0 0 4.5 0.5 1 1 65.706 65.734 2 0.0012129 20716 20230619_1883_Aki_TMTPro18x_K_F4 98.997 87.228 4414.1 5476 2535.8 5187.7 4106.7 6358.3 5030 4332.9 4929.5 4801.5 6118.5 5438.5 7983.6 6630 4812.7 5619.8 8364.1 7028.4 4080.3 5005.9 2775.3 5274.8 4184.1 6293 5010.7 4582.6 5074.2 4851.8 6295.2 5536.3 7939.6 6749.6 5148.8 5740.9 7959.1 6665.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15109000 3753 4672 3576 6917;6918 5682 5682 1 9606 Homo sapiens 0.014700193778253379 DFPETNNILK Unmodified 1189.5979 0.59790293 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 5.5 0.5 1 1 54.486 54.558 3 5.2221E-05 15641 20230619_1885_Aki_TMTPro18x_K_F5 138.66 84.051 257740 225720 245320 255230 223050 268690 253970 270910 308430 302400 309960 247600 338750 277700 281850 339880 320320 311300 238330 206870 249980 255600 234560 270740 256080 277360 311230 302340 318720 255210 342060 288830 290050 338790 306040 296010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 383770000 3754 1182 3577 6919;6920 5683;5684 5684 2 9606 Homo sapiens 0.010687894352258809 DFPEYTFAIADEEDYAGEVK Unmodified 2308.0059 0.0059394035 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 1 0 1 63.407 63.407 3 5.1785E-05 19894 20230619_1880_Aki_TMTPro18x_K_F1 85.937 72.482 13259 11350 13713 13414 13446 15088 18600 13038 14124 28075 27218 27325 28808 27572 23098 30117 32935 31607 12268 10407 13891 13402 14110 15089 18314 13875 15219 27527 27377 27772 29104 28558 24169 30288 31407 30010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50414000 3755 909 3578 6921 5685 5685 1 9606 Homo sapiens -0.09574332862530355 DFPFTIR Unmodified 894.45995 0.45995289 4270 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 1 0 1 57.229 57.229 2 0.077874 17421 20230619_1880_Aki_TMTPro18x_K_F1 73.637 30.59 65436 58306 65367 67678 71219 83665 79442 74816 90651 75117 68086 66388 86557 61995 71243 83150 72241 79935 60540 53446 66524 67796 73778 83181 79941 77050 90814 75678 71713 67674 86953 65277 72836 83000 69163 75929 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56719000 3756 4270 3579 6922 5686 5686 1 9606 Homo sapiens 0.008501306972902967 DFPLHLGK Unmodified 925.50215 0.50215205 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;A0A1U9XBD9;A0A1U9XBC3;Q14676-3;Q14676-4;A1Z5I7;A1Z5I6;A2AB06;B4DQD0;A2AB05;A1Z5I8;A0A087X0R2;A2AB07 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 0 4.5 3.5 1 1 51.205 51.243 3 0.0024736 14908 20230619_1880_Aki_TMTPro18x_K_F1 103.74 67.795 135920 108530 122280 134760 107050 130700 123140 123830 140270 136210 134310 132250 149810 121730 131040 150330 130460 159600 125560 99588 125200 133880 112980 132290 123810 127350 141720 136890 138750 134110 151460 127490 133670 151070 125030 151380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 197880000 3757 1308 3580 6923;6924 5687;5688 5687 2 9606 Homo sapiens 0.03642106105667153 DFPPAAAQVAHQK Unmodified 1378.6993 0.69934831 2205 B2R4C9;P51397 DAP Death-associated protein 1 yes no 0 0 0 7.5 0.5 1 1 43.378 43.423 3 2.4076E-08 10718 20230619_1887_Aki_TMTPro18x_K_F7 163.99 137.45 45038 34006 43274 47116 41060 51114 54086 56420 72326 53664 59229 65498 65402 51998 53459 69129 66041 62947 41612 31248 44112 46554 43250 51473 54330 57192 72055 54767 61682 65508 65981 54983 55351 68802 63044 59864 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119980000 3758 2205 3581 6925;6926 5689 5689 1 9606 Homo sapiens 0.025146608577642837 DFPQMGR Unmodified 849.38032 0.38032236 3455;2572 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6;B4DQM6;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B no no 0 0 0 5 0 1 42.953 43.033 2 0.072343 10819 20230619_1885_Aki_TMTPro18x_K_F5 76.134 53.115 104440 75270 81856 102200 100360 121050 98028 97069 133410 123160 135400 135160 133930 105890 116240 135860 139490 136930 96332 69163 85440 101180 102930 120390 100060 101530 133970 123480 138730 135680 135860 111810 119900 136050 133220 130060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76187000 3759 3455;2572 3582 6927 5690 5690 1 9606 Homo sapiens -0.05039259248349026 DFPQNAIR Unmodified 959.48248 0.48247924 4510 Q9H3N1;B4DZX7 TMX1;TXNDC Thioredoxin-related transmembrane protein 1 yes no 0 0 0 5.5 0.5 1 1 42.463 42.552 2 0.020218 10522 20230619_1885_Aki_TMTPro18x_K_F5 86.833 56.648 90788 72156 76375 80741 96945 100460 96146 93048 105210 96473 97390 77690 97169 82651 86605 104550 106390 98528 83823 66147 79114 81114 99034 99958 97250 95640 106360 96783 100140 79996 98701 86269 89440 104320 101540 93675 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209200000 3760 4510 3583 6928;6929 5691 5691 1 9606 Homo sapiens 0.0011173009489766628 DFPQYFAVVSR Unmodified 1327.6561 0.65608651 1573;3033 A0A5F9ZHM6;A0A5F9ZI15;A0A5F9ZHN0;A0A5F9ZH03;A0A5F9ZHE2;A0A5F9ZHR2;A0A5F9ZHL9;A0A5F9ZHJ4;A0A5F9ZI08;A0A5F9ZH39;A0A5F9ZI69;A0A5F9ZHJ6;A0A5F9ZHL3;A0A5F9ZGS5;A0A5F9ZHL5;A0A5F9ZH17;A0A5F9ZI18;A0A5F9ZI56;A0A5F9ZGY1;A0A5F9ZHG3;A0A5F9ZHQ5;A0A994J7V8;A0A5F9ZHC9;A0A5F9ZI81;A0A5F9ZH70;A0A5F9ZGZ1;A0A5F9ZHQ3;A0A5F9ZI36;A0A5F9ZHA1;A0A5F9ZH58;A0A5F9ZI73;A0A5F9ZHY6;A0A5F9ZGS7;A0A5F9ZH34;A0A5F9ZH10;A0A5F9ZH35;E9PCH6;A0A5F9ZI16;A0A5F9ZH99;A0A5F9ZH18;A0A5F9ZGX8;B7Z2H4;A0A5F9ZI53;A0A5F9ZH38;Q01484-5;Q01484-2;A0A5F9ZI45;A0A5F9ZI46;A0A5F9ZH30;B7Z636;A0A5F9ZGZ5;A0A5F9ZI65;A0A5F9ZHT8;A0A5F9ZGY3;A0A5F9ZH19;A0A5F9ZHN5;A0A5F9ZI40;A0A5F9ZHT4;I6L894;A0A5F9ZHD2;A0A5F9ZI41;A0A5K1VW73;A0A5F9ZHF7;A0A5F9ZHE4;B7Z678;Q7Z344;H0Y931;A0A5F9ZHV4;E9PHW9;A0A5F9ZGY4;Q01484;H0Y8Y2;A0A5F9ZHS1;D6RHE1;A0A5F9ZGX3;H0Y933;A0A5F9ZI30;A0A5F9ZHR8;A0A0U1RQN6;A0A669KB19;Q59G01;H0Y9E9;Q12955-7;Q12955-5;Q12955-4;Q12955;Q8NAK2;A0A087WZ65;A8KA62;Q6ZT73;A0A087WTF3;Q12955-6 ANK2;DKFZp686M09125;ANK3 Ankyrin-2;Ankyrin-3 no no 0 0 0 1.5 0.5 1 1 60.576 60.582 2 0.00037727 18858 20230619_1881_Aki_TMTPro18x_K_F2 115.33 93.09 56062 50713 54690 53039 47716 59867 61101 66232 74521 64463 68485 61998 77325 63245 77824 84655 78949 81273 51863 46440 55568 53509 50549 60165 61263 67145 74884 65187 70910 63175 78650 66344 79228 84513 75543 77220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79178000 3761 1573;3033 3584 6930;6931 5692 5692 1 9606 Homo sapiens 0.00536471080499723 DFPVESVK Unmodified 919.4651 0.46509784 4506 Q9H307;A8K964;B4DTD4;B4E392 PNN Pinin yes no 0 0 0 4 0 1 50.343 50.374 3 0.047401 14155 20230619_1883_Aki_TMTPro18x_K_F4 51.113 1.0728 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3762 4506 3585 6932 5693 5693 1 9606 Homo sapiens 0.002143897692462815 DFPYEEDSRPR Unmodified 1409.6212 0.62115757 4084 Q5W009;Q96I25;Q5W011;Q5W010;Q5W012;H0Y6J6 RBM17 Splicing factor 45 yes no 0 0 1 1.5 0.5 1 1 39.888 39.923 3 1.1484E-12 9760 20230619_1881_Aki_TMTPro18x_K_F2 209.97 199.32 155940 111160 127220 155820 169730 199720 177490 172250 224720 197360 199720 219430 211040 207480 204660 235540 227550 237800 143860 102180 132470 154160 173380 197910 179880 178540 225230 198910 206740 221330 214960 215760 209660 236300 217570 225800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 269140000 3763 4084 3586 6933;6934 5694 5694 1 9606 Homo sapiens -0.06726816518107626 DFQDYMEPEEGCQGSPQR Unmodified 2171.8524 0.85243242 419 A0A024R6Z0;O43237-2;O43237;B4E2E0;B4DHD8;H3BUM4 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 1.5 0.5 1 1 51.795 51.815 3 1.235E-13 15101 20230619_1880_Aki_TMTPro18x_K_F1 148.44 144.09 13896 12252 12960 12150 14878 18181 17903 15172 17883 16367 17293 17428 17523 14580 17773 21289 17494 15405 12848 11216 13273 12366 15394 17859 17865 15741 18191 16515 17787 17558 17887 15478 18072 20948 16726 14701 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39340000 3764 419 3587 6935;6936 5695 5695 1 9606 Homo sapiens -0.18661969451522964 DFQEETVK Unmodified 994.46074 0.46074075 4130 Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A8I5KSP1 LARP1 La-related protein 1 yes no 0 0 0 2 0.816 1 1 1 44.451 44.503 2 0.0012021 11915 20230619_1881_Aki_TMTPro18x_K_F2 146.69 79.661 198420 164470 193080 219700 194090 201290 202780 196600 283270 226220 280110 249110 234250 226880 226850 239600 297530 290430 183450 151010 196730 217040 201810 204870 206460 202070 283590 227900 285280 251210 240440 235390 234770 243380 283940 275340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150820000 3765 4130 3588 6937;6938;6939 5696;5697 5696 2 9606 Homo sapiens -0.03671119444334181 DFQEYVEPGEDFPASPQR Unmodified 2109.928 0.92796385 4757 Q9Y6G9;B3KM42;E9PHI6;Q6MZE7;C9JGM7 DYNC1LI1;DKFZp686A1525 Cytoplasmic dynein 1 light intermediate chain 1 yes no 0 0 0 2.5 0.5 1 1 57.785 57.807 3 1.8581E-06 17728 20230619_1881_Aki_TMTPro18x_K_F2 101.92 92.393 48860 42289 53246 51261 47582 53842 48699 49680 64861 53621 54055 54543 60760 49207 52054 52713 56861 54834 45229 38784 53622 51077 49929 54158 49558 51152 64713 54039 56257 55137 61374 51137 53351 53041 54343 52067 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 25896000 3766 4757 3589 6940;6941 5698;5699 5698 2 9606 Homo sapiens -0.08260300937308784 DFQPYFK Unmodified 943.44397 0.44396847 4423 Q9BRX8-2;Q9BRX8 FAM213A Redox-regulatory protein FAM213A yes no 0 0 0 7.5 0.5 1 1 55.142 55.206 2 0.032107 15785 20230619_1888_Aki_TMTPro18x_K_F8 98.997 51.93 365830 352370 367910 373970 375350 432840 485010 494590 535080 564550 527740 478540 569280 461370 488730 621090 567310 547680 338660 322650 373830 376960 392330 434720 484180 502620 542230 564080 543260 489450 575790 485030 503460 617070 541900 521040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 347700000 3767 4423 3590 6942;6943 5700;5701 5701 2 9606 Homo sapiens -0.03001575539622081 DFQTETIR Unmodified 1008.4876 0.4876242 3336 O94888 UBXN7 UBX domain-containing protein 7 yes yes 0 0 0 2.5 0.5 1 1 41.45 41.519 2 0.0061558 10269 20230619_1882_Aki_TMTPro18x_K_F3 111.39 49.897 189050 128810 183410 198690 222650 268510 225370 227170 281830 226130 257410 279520 251900 250090 233680 244500 296800 291730 174580 118570 187510 195690 228510 265100 228780 234880 282760 230380 265150 280260 256720 258520 241470 248430 283330 276610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220960000 3768 3336 3591 6944;6945 5702;5703 5703 2 9606 Homo sapiens -0.016280108331329757 DFQYNEEEMK Unmodified 1331.534 0.53398204 575 A0A024R9I0;P21283;E7EV59;B7Z593 ATP6V1C1 V-type proton ATPase subunit C 1 yes no 0 0 0 1.5 0.5 1 1 49.279 49.308 3 0.00031317 14124 20230619_1881_Aki_TMTPro18x_K_F2 94.82 81.14 80188 59494 71191 75909 79158 96526 92479 91281 113320 97179 113550 117490 118170 103830 107030 118220 154870 137520 74036 54624 73239 75576 82069 95886 93097 93764 114200 98555 116710 117910 120010 108320 111720 119610 147590 130480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169680000 3769 575 3592 6946;6947 5704 5704 1 9606 Homo sapiens -0.11852358784040007 DFSALESQLQDTQELLQEENR Unmodified 2492.1667 0.16669058 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5 MYH9 Myosin-9 yes no 0 0 0 3.5 0.5 1 1 64.356 64.377 3 1.4726000000000002E-30 20303 20230619_1882_Aki_TMTPro18x_K_F3 214.26 200.25 8050.3 6067.2 6442.3 9596.3 9722.4 10066 9033.1 7744.1 10464 8130.3 9550.1 12290 11491 9523.9 8162.9 10582 12200 11050 7427.9 5584 6746 9394.8 9821 10088 9185.5 8092.6 10538 8328.8 9941.3 12186 11511 9968.9 8594.3 10637 11626 10495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27899000 3770 148 3593 6948;6949 5705 5705 1 9606 Homo sapiens -0.019706102164491313 DFSAPLTISR Unmodified 1105.5768 0.57677356 3618 P50479;A0A0S2Z4P0;A0A0S2Z4N4;P50479-2 PDLIM4 PDZ and LIM domain protein 4 yes no 0 0 0 7.5 0.5 1 1 52.108 52.184 2 0.0014467 14499 20230619_1888_Aki_TMTPro18x_K_F8 107.08 79.489 275420 223320 251260 242930 228550 239300 248380 239970 273250 290830 291980 252600 313600 225360 256560 299560 275620 239670 254470 204660 256810 243830 239700 242420 250170 246500 277860 289990 299320 257400 316360 237420 263160 296390 263280 228410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152340000 3771 3618 3594 6950;6951 5706 5706 1 9606 Homo sapiens 0.02820824126365551 DFSAPTLEDHFNK Unmodified 1519.6943 0.69432251 3657 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 0 0 0 5.5 0.5 1 1 51.778 51.854 3 1.1388E-15 14539 20230619_1885_Aki_TMTPro18x_K_F5 203.88 171.82 381550 327790 397520 341340 430430 463610 409280 455440 527180 431740 443140 427360 481810 395050 466600 531570 452790 422420 353040 300210 402600 345540 443970 459480 417700 464880 526900 437660 460240 433300 489700 415690 474330 525730 433150 402490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157670000 3772 3657 3595 6952;6953 5707;5708 5707 2 9606 Homo sapiens -0.04473687795461956 DFSDITK Unmodified 824.3916 0.39159855 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 4.67 0.471 1 2 49.153 49.21 2 0.004519 13408 20230619_1885_Aki_TMTPro18x_K_F5 121.99 49.756 760900 531300 599880 755260 711590 761890 727290 755630 1126700 902280 851600 848450 1102800 847920 704610 1168500 1140900 952300 701710 488520 625340 744020 731730 769670 744430 776260 1114000 903110 897020 864350 1098600 891770 750040 1155600 1086100 907480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 509390000 3773 1748 3596 6954;6955;6956 5709;5710 5710 2 9606 Homo sapiens -0.02762158673237991 DFSGGWR Unmodified 823.3613 0.36130147 902 A0A090N7X1;A0A090N7Y2;Q9UG63;Q9UG63-2;C9JHK9;C9JZV3 ABCF2 ATP-binding cassette sub-family F member 2 yes no 0 0 0 6.5 0.5 1 1 45.327 45.413 2 0.058677 11492 20230619_1887_Aki_TMTPro18x_K_F7 82.305 62.669 101340 100760 96791 84404 106980 128920 106720 112110 147410 115460 109520 89249 110620 100170 114640 100310 107290 102170 93796 92088 98793 87288 110480 126650 108870 115690 146290 115830 114080 92210 113100 102990 116010 100970 102690 97043 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110210000 3774 902 3597 6957;6958 5711 5711 1 9606 Homo sapiens -0.05744472547769419 DFSHPQMPK Oxidation (M) 1101.4913 0.49132937 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 1 0 6.4 0.8 1 1 3 36.902 36.972 3 0.0021023 7826 20230619_1887_Aki_TMTPro18x_K_F7 85.731 67.291 192530 138900 173060 191050 206970 201450 200020 193050 244140 199680 224950 200730 210050 178180 208660 229660 226470 200010 177750 127650 178000 188740 212010 202770 203420 198020 245310 201580 230890 203130 214810 187220 213300 228260 216330 190380 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 675980000 3775 2633 3598 6959;6960;6961;6962;6963 5712;5713;5714;5715 5713 1582 4 9606 Homo sapiens -0.05535664330932377 DFSHPQMPK Unmodified 1085.4964 0.49641475 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 7 0.816 1 1 1 42.51 42.568 3 0.00014508 10261 20230619_1887_Aki_TMTPro18x_K_F7 133.13 112.26 318920 252970 290260 341930 315840 358260 342450 349530 403430 360570 389080 404470 414980 362570 362320 412160 449450 434520 294620 232350 297950 338100 326960 360750 345650 358030 406870 365240 401080 407220 420370 377980 374430 414510 429080 412530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1462899999.9999998 3776 2633 3598 6964;6965;6966 5716;5717;5718 5717 3 9606 Homo sapiens -0.04291360468300809 DFSPEALKK Unmodified 1033.5444 0.5444108 2400 Q5BKY2;Q6IB98;Q53HR0;Q53HG0;B3KS98;O15372;E5RJT0;E5RGU4 EIF3H;EIF3S3 Eukaryotic translation initiation factor 3 subunit H yes no 0 0 1 7.5 0.5 1 1 48.713 48.789 3 0.00063699 12959 20230619_1888_Aki_TMTPro18x_K_F8 111.06 65.896 597960 508360 563540 662620 668080 698700 695510 663840 799880 757660 787370 665410 739710 564490 717240 749900 726160 572720 552790 466610 577490 656780 686250 703060 702780 683190 808430 757970 805540 676700 754910 595510 730360 740710 693630 546410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 326360000 3777 2400 3599 6967;6968 5719;5720 5719 2 9606 Homo sapiens 0.028980367233771176 DFSPSGIFGAFQR Unmodified 1427.6834 0.68336389 2498;3661 G3V325;B4DJ38;C9JJT5;P56134-4;P56134-2;C9JU26;P56134;P56134-3;Q53FE1 ATP5J2-PTCD1;ATP5J2 ATP synthase subunit f, mitochondrial no no 0 0 0 3 0 1 62.993 63.023 2 9.682499999999999E-21 19691 20230619_1882_Aki_TMTPro18x_K_F3 271.62 241.46 266600 213420 262150 301610 264890 296710 354380 319740 370540 301220 341650 287840 344120 283270 322160 328790 307850 350110 246450 196110 267030 297200 277290 300830 352470 324700 375090 305150 351670 292970 349980 294880 327240 330860 294980 332160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 612290000 3778 2498;3661 3600 6969 5721 5721 1 9606 Homo sapiens -0.013370453790912507 DFSSIIQTCSGNIQR Unmodified 1724.8152 0.8151827 2189 B1AJQ6;Q6LEU0;Q86Y82 STX12 Syntaxin-12 yes no 0 0 0 1.5 0.5 1 1 55.713 55.724 3 4.7157E-14 16740 20230619_1880_Aki_TMTPro18x_K_F1 145.52 134.15 87600 68978 91954 97386 82009 104770 97813 92836 100730 105060 95580 96815 106070 89407 102740 107730 100760 108880 81016 63387 92950 96077 86479 105050 97816 96017 102310 105280 98801 98398 107750 93460 104450 108020 96481 103380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169800000 3779 2189 3601 6970;6971 5722 5722 1 9606 Homo sapiens -0.018232281443260945 DFSVFFQK Unmodified 1016.4967 0.49673232 2831 D3DVQ1;O95202 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes no 0 0 0 2.5 0.5 1 1 62.686 62.706 2 0.0068057 19846 20230619_1881_Aki_TMTPro18x_K_F2 122.18 70.181 91131 84982 89039 89499 87617 96346 98228 100300 117680 90819 82496 93130 94033 78086 101070 95549 109230 104150 84324 77818 90605 90165 91429 97033 99023 101930 117330 92399 86912 93902 95960 81994 103060 96237 104390 98853 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138240000 3780 2831 3602 6972;6973 5723;5724 5723 2 9606 Homo sapiens -0.010856174768036908 DFSVQIK Unmodified 835.44397 0.44396847 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;Q6ZS03;B4DKR8;Q96CF6;Q2HJC8;Q6ZN49 HDLBP Vigilin yes no 0 0 0 7 0 1 51.894 51.968 2 0.022901 14448 20230619_1887_Aki_TMTPro18x_K_F7 101.28 3.8535 362390 283680 301700 330580 366810 374380 390210 393990 452330 400690 425090 401690 485690 380200 404170 498600 449200 424500 334540 260170 312670 330660 376450 375820 393940 401250 456140 404720 439860 407350 489710 399190 415420 494740 429190 404070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 354330000 3781 292 3603 6974 5725 5725 1 9606 Homo sapiens 0.01966424460374583 DFSYNYFGFK Unmodified 1286.5608 0.56078914 2555 B4DNN4;Q53GZ5;P23921;B4E0I8 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 0 0 0 1.5 0.5 1 1 62.513 62.518 3 0.05946 19785 20230619_1881_Aki_TMTPro18x_K_F2 44.188 30.525 30165 27925 26375 28873 26923 39389 30751 28416 40449 38516 35223 37287 41840 31000 39001 43203 40192 39513 27887 25567 27144 29219 28128 38769 31074 30058 40463 38365 36691 37690 42330 32848 39797 43000 38439 37571 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140100000 3782 2555 3604 6975;6976 5726 5726 1 9606 Homo sapiens -0.07102882110530118 DFTATDLSEFAAK Unmodified 1414.6616 0.6616254 2292 B2RB23;P42765;A0A0B4J2A4;B3KNP8 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes no 0 0 0 5 0 1 61.454 61.503 3 8.7356E-08 18557 20230619_1885_Aki_TMTPro18x_K_F5 148.18 134.22 422040 398360 401480 483440 542540 617200 631850 597280 701250 467830 497700 506390 524650 470440 539440 516380 530930 630790 390470 365240 412360 482900 554920 613380 633540 608100 701590 481380 521640 511280 535550 488980 547710 524650 508760 597550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 448190000 3783 2292 3605 6977 5727 5727 1 9606 Homo sapiens -0.029118949183157383 DFTDIQQDFLPWK Unmodified 1651.7882 0.7882229 2900;4026 E7ESY4;Q13330-3;Q13330;A0A024R6P5;Q13330-2;H0Y4T7;Q59FW1 MTA1 Metastasis-associated protein MTA1 no no 0 0 0 7 0 1 64.626 64.653 3 7.9869E-05 19943 20230619_1887_Aki_TMTPro18x_K_F7 105.66 90.498 89238 79954 92910 100790 84024 102380 101010 103510 117870 107860 114690 114950 124460 105800 119530 124700 118790 126200 82593 73348 94005 100100 88514 103400 101410 105800 118970 109010 118270 116100 126480 110440 121620 125080 113710 119830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178290000 3784 2900;4026 3606 6978 5728 5728 1 9606 Homo sapiens -0.01159968693218616 DFTDLIVINEDRK Unmodified 1576.8097 0.80968662 4539 Q9H9Y2 RPF1 Ribosome production factor 1 yes yes 0 0 1 5 0 1 59.045 59.099 3 0.00011269 17543 20230619_1885_Aki_TMTPro18x_K_F5 101.97 86.081 44745 30464 42659 49616 35282 42799 48607 41745 54817 48438 43440 43515 52661 44473 53321 56129 53170 52890 41315 28061 43447 48410 37625 43741 48411 42938 55036 48471 45527 44446 53490 46465 54215 56029 50872 50270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28611000 3785 4539 3607 6979 5729 5729 1 9606 Homo sapiens 0.044354163355137644 DFTENPCLR Unmodified 1150.5077 0.50770771 3214 O00451;O00451-2;O00451-3;B4DS89 GFRA2 GDNF family receptor alpha-2 yes no 0 0 0 3 0.816 1 1 1 44.236 44.302 2 4.4142E-05 11522 20230619_1882_Aki_TMTPro18x_K_F3 164.71 136.2 287920 201760 263950 294930 594150 709910 322250 302350 396310 334240 494890 663350 400380 472840 600060 427210 638990 810060 265810 185570 275270 295000 584410 676700 342930 337910 403370 346550 500510 651360 422080 491360 607900 451930 612190 764710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 295780000 3786 3214 3608 6980;6981;6982 5730;5731 5730 2 9606 Homo sapiens -0.06152583164839598 DFTPAELR Unmodified 947.47125 0.47124585 3209 Q6IB11;O00264;O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 yes no 0 0 0 3.5 0.5 1 1 47.211 47.272 2 0.0014659 12909 20230619_1882_Aki_TMTPro18x_K_F3 142.19 103.22 468330 416180 430520 471370 443180 564070 519920 466920 645320 405780 443470 404580 365610 372600 505990 452210 468780 464950 433000 381410 441060 472710 462250 561010 523350 482290 641320 413960 461110 410020 382810 389370 509710 454050 448860 441490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 287440000 3787 3209 3609 6983;6984 5732;5733 5732 2 9606 Homo sapiens -0.004590919992438103 DFTPAELRR Unmodified 1103.5724 0.57235688 3209 Q6IB11;O00264;O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 yes no 0 0 1 6.5 0.5 1 1 40.914 40.993 3 0.0010293 9937 20230619_1886_Aki_TMTPro18x_K_F6 99.855 60.233 89024 91443 95340 89923 119630 136200 126230 120520 158530 103880 106800 102430 115500 89029 122020 103310 112330 101500 82498 83662 96684 91608 122570 133880 127800 123720 157450 105950 112390 103620 117860 93078 123310 103560 107500 96462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75570000 3788 3209 3610 6985;6986 5734 5734 1 9606 Homo sapiens 0.024713597034633494 DFTPVCTTELGR Unmodified 1394.65 0.65001485 3527 V9HWC7;P30041 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 0 4.5 1.12 1 1 1 1 50.538 50.602 2 4.9355E-13 14223 20230619_1883_Aki_TMTPro18x_K_F4 211.53 173.88 723260 457860 454580 957980 898860 1238600 1039500 1489600 799650 974720 911230 894050 479270 650950 732070 675130 586020 895600 665780 423480 494510 928500 904070 1234900 1033000 1488700 833240 1008600 911200 902790 516260 680130 731810 690610 564250 847180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2340900000 3789 3527 3611 6987;6988;6989;6990 5735;5736;5737 5736 3 9606 Homo sapiens -0.031524152133670214 DFTQYIFTEK Unmodified 1290.6132 0.61321864 4362 Q96HR8;Q96HR8-2;D6RIB3 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 yes no 0 0 0 8 0 1 62.202 62.231 3 0.028045 18731 20230619_1888_Aki_TMTPro18x_K_F8 57.019 42.329 31847 32838 28358 30828 25448 36768 32759 36258 39502 34365 39605 37454 38616 31734 42294 42045 41770 39174 29469 30033 29081 31400 26945 36714 32827 37012 39835 34931 40583 37718 39610 33466 42912 41927 39952 37247 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20309000 3790 4362 3612 6991 5738 5738 1 9606 Homo sapiens -0.020463437675971363 DFTSEPR Unmodified 850.3821 0.38209649 3571 P41091;Q2VIR3;Q2VIR3-2 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 1.5 0.5 1 1 36.349 36.378 2 0.0045027 8242 20230619_1881_Aki_TMTPro18x_K_F2 147.83 93.306 262740 180190 242390 258360 320330 306600 276600 284090 417980 337940 374700 395250 382450 316810 325690 283200 436450 409550 242550 165710 249110 255030 325340 305920 285750 293190 415890 340590 386840 395660 387440 327830 338020 292370 416340 387750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252130000 3791 3571 3613 6992;6993 5739;5740 5740 2 9606 Homo sapiens -0.04907926958765074 DFTSLENTVEER Unmodified 1438.6576 0.65760265 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 2 0 1 54.417 54.441 2 4.7538E-31 16311 20230619_1881_Aki_TMTPro18x_K_F2 270.93 239.48 59052 53363 56125 58290 63089 77226 76081 71096 86783 77032 82440 97832 80324 77309 85480 88494 88256 106740 54617 48885 57399 58728 65399 76507 76257 73218 87593 78181 84823 97625 82359 80986 87008 89760 84544 101120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22713000 3792 673 3614 6994 5741 5741 1 9606 Homo sapiens -0.04417984412043552 DFTVASPAEFVTR Unmodified 1438.7092 0.70924429 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49;O00763;O00763-2;O00763-3;A0A0C4DGT1;S4R3S7;A0A087X0W4;A0A087WVR6 ACACA;hCG_30204;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase yes no 0 0 0 6 0 1 58.594 58.659 2 2.6822E-07 17552 20230619_1886_Aki_TMTPro18x_K_F6 151.07 115.19 66284 58388 66244 70114 44035 52469 51873 53179 58687 78306 70315 72810 88909 65926 70941 91494 76223 79942 61320 53541 66974 69627 47747 54428 52129 54984 59982 77588 72416 73934 89225 69618 72861 90824 72904 76038 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65359000 3793 3833 3615 6995 5742 5742 1 9606 Homo sapiens 0.007438040724764505 DFTVSALHGDMDQK Oxidation (M) 1578.6984 0.69842161 3883 Q14240;Q14240-2;E7EQG2;Q9NZE6;B4DJX6;Q96B07 EIF4A2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 1 0 3.5 0.5 1 1 46.438 46.499 3 1.9771E-05 12382 20230619_1883_Aki_TMTPro18x_K_F4 110.51 90.129 204040 174430 205660 205530 189460 181810 213620 205480 214480 229740 250660 229420 229590 196140 219490 234560 250220 287260 188730 159940 208500 204800 198450 186320 214110 209000 219930 230790 254420 231860 234520 205560 225160 237980 239360 272150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207100000 3794 3883 3616 6996;6997 5743 5743 2566 1 9606 Homo sapiens -0.06777966364074928 DFTVSAMHGDMDQK 2 Oxidation (M) 1612.6498 0.64975686 2105 P60842;A8K7F6;A8K088;P60842-2;J3KT12;B4DNH2;J3KSZ0;J3QL52 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 2 0 4 0.816 1 1 1 39.947 40.009 3 0.0002546 9597 20230619_1882_Aki_TMTPro18x_K_F3 92.039 80.599 130100 106100 117370 142140 133950 131510 145170 149830 182120 169900 186970 189230 176480 143560 161910 176740 203290 199130 120200 97427 120680 140420 138070 134240 146860 152350 183580 171190 191140 189660 179750 151410 167260 178280 194070 188920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98228000 3795 2105 3617 6998;6999;7000 5744 5744 1323;1324 1 9606 Homo sapiens -0.13206202995479543 DFVAEPMGEKPVGSLAGIGEVLGK Oxidation (M) 2415.2356 0.23556218 340 A0A024R5H0;O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed yes no 0 1 1 7.5 0.5 1 1 62.075 62.107 4 0.010419 18658 20230619_1888_Aki_TMTPro18x_K_F8 67.827 51.503 83255 61069 77786 73636 71218 82686 72151 64000 113300 71231 81328 71812 64202 57542 84170 58074 60224 50299 76892 56041 79340 73459 74651 82500 73949 66910 111650 71737 84154 72386 67019 59826 83770 58022 57785 47893 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 960000000 3796 340 3618 7001;7002 5745 5745 200 1 9606 Homo sapiens 0.08455382549573187 DFVAEPMGEKPVGSLAGIGEVLGK Unmodified 2399.2406 0.24064756 340 A0A024R5H0;O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed yes no 0 0 1 7.5 0.5 1 1 62.81 62.84 4 8.3982E-13 18990 20230619_1888_Aki_TMTPro18x_K_F8 121.47 108.28 68019 57694 78045 71098 73725 113560 80277 89691 116710 86599 99518 83549 75200 68900 126100 68587 79083 75923 62986 52925 78381 71255 77394 110960 81713 93122 116010 87673 101830 84478 79926 71534 124420 69538 76098 72046 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1240800000 3797 340 3618 7003;7004 5746 5746 1 9606 Homo sapiens 0.09699686412159281 DFVAPHLAQPTGSQSPPPGSK Unmodified 2117.0542 0.054167421 2345 B3KM73;D3DVL7;B4DU42;Q969Z0-2;Q969Z0;B3KRS4;B3KMT3;H7C4R5 TBRG4 Protein TBRG4 yes no 0 0 0 8 0 1 47.195 47.244 3 2.2709E-05 12373 20230619_1888_Aki_TMTPro18x_K_F8 90.968 76.039 19774 17686 20734 19230 19788 20447 21107 22948 25763 27706 26792 30158 32469 27284 25790 28995 32691 38612 18303 16202 20957 19326 20656 20653 21362 23390 26045 27814 27706 30389 32644 28348 26741 29636 31253 36550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37201000 3798 2345 3619 7005 5747 5747 1 9606 Homo sapiens 0.040322503586594394 DFVASIDATYAK Unmodified 1299.6347 0.63468237 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 6 0.816 1 1 1 58.893 58.949 3 3.6368E-07 17360 20230619_1887_Aki_TMTPro18x_K_F7 156.51 134.28 234830 195330 207180 226210 183480 228240 230770 218480 277170 262510 257340 239840 271320 232180 242010 270170 236730 259410 216950 179090 212550 225980 194060 230410 231360 225100 278940 262330 265440 244300 275060 241780 246490 270230 226710 246420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 384680000 3799 1104 3620 7006;7007;7008 5748;5749;5750 5750 3 9606 Homo sapiens -0.0031495873884068715 DFVEDDTTHG Unmodified 1134.4465 0.44654725 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 1 0 1 41.45 41.45 2 8.4835E-08 10712 20230619_1880_Aki_TMTPro18x_K_F1 198.07 191.4 171090 133320 144990 167760 177420 190110 163340 170170 228910 194050 213500 217270 208740 177160 179710 233310 242070 219070 157960 122360 150060 166840 181500 190100 167530 175860 228790 195630 219530 218210 211890 187000 186980 232590 230850 208310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284620000 3800 4191 3621 7009 5751 5751 1 9606 Homo sapiens -0.11529816663301062 DFVEHSAR Unmodified 959.44609 0.44609374 1445 Q6IB91;A0A384MTT2;Q16822;A0A0S2Z430;H0YM31;Q16822-2;A0A0S2Z451 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 2.5 0.5 1 1 31.637 31.708 3 0.00019773 6386 20230619_1881_Aki_TMTPro18x_K_F2 158.07 139.76 103920 79302 104190 85573 105510 99225 116850 117960 171670 131190 181660 215630 153630 147100 210940 154430 187040 205560 96050 72686 105710 86196 109750 99806 118860 119580 171920 134470 185010 212610 160490 154310 211860 158120 179310 194640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 95693000 3801 1445 3622 7010;7011 5752;5753 5752 2 9606 Homo sapiens -0.035251468018145715 DFVNYLVR Unmodified 1024.5342 0.53418046 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 1.5 0.5 1 1 58.384 58.39 2 0.0028615 17961 20230619_1881_Aki_TMTPro18x_K_F2 133.6 94.808 630810 585470 518530 609450 829430 1068100 797670 800630 1224000 258360 176500 177360 197120 178040 465370 234220 233130 207100 582920 536070 541630 619390 838400 1038700 817980 821560 1178000 289940 231820 184220 213720 186600 454380 233700 225120 197090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1150800000 3802 3811 3623 7012;7013 5754;5755 5755 2 9606 Homo sapiens 0.02289473788800933 DFVQVMR Unmodified 893.44292 0.44292261 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7.5 0.5 1 1 48.578 48.654 2 0.0079671 12951 20230619_1887_Aki_TMTPro18x_K_F7 121.29 31.619 253690 219080 226200 240170 201280 274430 256790 249410 324770 241670 218260 227030 252290 215400 240930 278520 273160 269700 234450 200730 231850 241330 213120 274250 257720 256340 322560 244430 230530 230820 255970 225920 247170 278260 261020 256270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 319530000 3803 3758 3624 7014;7015 5756 5756 1 9606 Homo sapiens -0.00806113180169632 DFVTEALQSR Unmodified 1164.5775 0.57750184 3920 Q6FGV9;Q15126 PMVK Phosphomevalonate kinase yes no 0 0 0 5 0.816 1 1 1 54.732 54.804 2 1.6291E-06 15729 20230619_1885_Aki_TMTPro18x_K_F5 170.47 141.31 184590 163090 161860 204560 175300 203180 186670 189820 225960 245900 249410 267780 264610 228670 250670 284500 263720 313670 170600 149620 166780 203090 181510 205250 188810 196380 229040 246150 255590 269480 268940 240150 256070 286520 252550 297430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 474220000 3804 3920 3625 7016;7017;7018 5757;5758 5758 2 9606 Homo sapiens 0.0017961877540528803 DFVTTAEDR Unmodified 1052.4775 0.47745344 4702 Q9Y263;E5RIM3;H0YAU9 PLAA Phospholipase A-2-activating protein yes no 0 0 0 1.5 0.5 1 1 42.684 42.724 2 9.0896E-06 11289 20230619_1880_Aki_TMTPro18x_K_F1 175.51 110.76 123850 99602 100620 123570 134610 149210 129400 152130 172240 156830 149250 150600 163570 132070 125520 160000 154600 157890 114330 91393 104800 123140 137130 148990 132110 155230 172160 158070 154800 152540 164660 138370 130100 160120 147660 149970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122490000 3805 4702 3626 7019;7020 5759 5759 1 9606 Homo sapiens -0.04668618558389426 DFWEQEVR Unmodified 1107.4985 0.49852324 1445 Q6IB91;A0A384MTT2;Q16822;A0A0S2Z430;H0YML5;Q16822-3;A0A0S2Z4C0 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 2 0 1 52.015 52.054 2 0.038059 15346 20230619_1881_Aki_TMTPro18x_K_F2 72.879 60.653 247290 209620 202780 188800 224000 300880 276960 248590 415360 184540 207350 279560 225500 220060 301280 218730 225290 274210 228370 191780 210040 194030 233200 294510 280120 255890 406180 193360 223980 277260 233400 228760 300390 223220 216630 259680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55250000 3806 1445 3627 7021 5760 5760 1 9606 Homo sapiens -0.050926084588581944 DFYELEPEK Unmodified 1168.5288 0.52882031 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 2.5 1.12 1 1 1 1 55.332 55.351 2;3 0.00014489 16501 20230619_1882_Aki_TMTPro18x_K_F3 163.32 109.54 338530 269250 319660 353550 316820 358500 327610 347240 415350 438040 440380 469230 469760 416780 428740 503940 487200 560660 312830 247210 326430 350130 329860 361850 332570 357940 419380 438770 452110 473100 476720 436280 440370 507940 466100 531640 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 551020000 3807 3432 3628 7022;7023;7024;7025 5761;5762;5763 5762 3 9606 Homo sapiens -0.04870294584338808 DFYMTDSISR Unmodified 1233.5336 0.53358811 1339 E5KRK5;A0A291FIZ5;P28331-4;P28331;P28331-2;P28331-5;B4DJ81;P28331-3;Q9P1A0 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 4.5 0.5 1 1 51.483 51.534 2 0.0014595 14698 20230619_1883_Aki_TMTPro18x_K_F4 106.88 95.033 61072 53375 71626 71303 72980 98622 78693 74527 105610 77780 85838 70029 83442 68876 76384 87334 92348 91006 56576 48999 71928 70864 76010 97036 79828 77883 105180 78296 88776 71495 84915 72093 78737 87634 88194 86404 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53848000 3808 1339 3629 7026;7027 5764 5764 1 9606 Homo sapiens -0.07383733713231777 DFYVAFQDLPTR Unmodified 1470.7143 0.71432967 3892 Q4ZG57;Q14566 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 7 0 1 62.227 62.263 2 1.4632E-06 18841 20230619_1887_Aki_TMTPro18x_K_F7 154.66 102.08 268380 206610 211520 253280 200120 264800 265850 227060 314730 324430 306130 279110 319560 288430 290410 340020 319440 309010 247640 189590 219750 252030 211080 265960 265630 237300 317610 321400 314900 285800 324470 299880 297700 339010 305280 293870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 449240000 3809 3892 3630 7028 5765 5765 1 9606 Homo sapiens -0.002198920648879721 DGADFAK Unmodified 722.32352 0.32351898 3378;26 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;A0A0M4FNU3;H3BR04;H3BUH7;H3BMQ8;H3BU78;A4UCS9;A0A024QZ64;P09972;B7Z1Y2;B7Z3K9;B7Z1N6;A8MVZ9;C9J8F3;J3KSV6;J3QKP5;B7Z1Z9;K7EKH5 ALDOA;HEL-S-87p;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C no no 0 0 0 2.5 0.5 1 1 41.899 41.97 2 0.05047 10422 20230619_1882_Aki_TMTPro18x_K_F3 89.298 43.986 290860 118170 311890 345260 476330 493920 372260 484770 410470 273980 486980 591820 400920 448110 547350 179710 513210 494230 268270 110320 317700 331470 478670 487450 382900 489950 418330 297880 493300 580800 419480 452500 550030 203830 491240 466150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 746980000 3810 3378;26 3631 7029;7030 5766 5766 1 9606 Homo sapiens -0.04874983533238719 DGAPSPMMPNEAR Unmodified 1371.5911 0.59111977 2484 B4DH29;C9J2Y9;B4DHJ3;P30876 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 0 3 0 1 42.039 42.102 2 1.44E-07 10502 20230619_1882_Aki_TMTPro18x_K_F3 133.81 119.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3811 2484 3632 7031 5767 5767 1 9606 Homo sapiens -0.07981214779283619 DGAPVATNAFHSPR Unmodified 1438.6953 0.69532556 1874 Q96S52;A0A994J5E6;Q8NBL9;B2RBB2;A0A994J801;A0A994J555;A0A994J5S5;A0A994J550;A0A994J7M9;A0A994J810;A0A994J7M6;A0A994J5S0;Q96IR5;Q96S52-2;A0A024QZ14;Q9BVC1;B4DLL0 PIGS GPI transamidase component PIG-S yes no 0 0 0 6 0 1 37.968 38.044 3 1.1269E-11 8769 20230619_1886_Aki_TMTPro18x_K_F6 165.36 150.76 32847 27279 32752 31477 44797 37341 43524 39259 44482 41191 44081 30619 34831 31636 50511 30950 40874 38757 30375 25010 33442 31538 45437 37397 43971 40021 45236 41212 44784 31628 36589 32583 50445 31615 39186 36736 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63085000 3812 1874 3633 7032 5768 5768 1 9606 Homo sapiens -0.006474286359207326 DGASCAELVSFK Unmodified 1282.5864 0.58635197 788 A8K097;A0A024RE04;Q5JVF3-3;Q5JVF3-2;Q5JVF3;Q5JVF3-4 RP11-98F14.6;PCID2 PCI domain-containing protein 2 yes no 0 0 0 5 0 1 53.784 53.854 3 0.0047512 15411 20230619_1885_Aki_TMTPro18x_K_F5 78.903 56.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3813 788 3634 7033 5769 5769 1 9606 Homo sapiens -0.0436377565042676 DGATILTHAYSR Unmodified 1303.6521 0.65206377 3882 Q14232;F5H0D0;Q14232-2 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes no 0 0 0 7.5 0.5 1 1 42.08 42.119 3 2.9218E-24 10123 20230619_1887_Aki_TMTPro18x_K_F7 225.15 183.11 109410 95826 113410 117530 117520 131440 131400 140880 146290 121370 126520 126900 130490 108930 115190 135130 146790 146780 101250 87891 114970 117120 122120 132060 132170 142710 147330 123890 130910 128010 132360 114370 119260 135960 140140 139280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 263540000 3814 3882 3635 7034;7035 5770;5771 5770 2 9606 Homo sapiens 0.012383815867679004 DGAWGAFR Unmodified 878.4035 0.40350064 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 7 0.816 1 1 1 48.383 48.461 2 0.0023222 12871 20230619_1887_Aki_TMTPro18x_K_F7 128.57 83.185 737990 717160 743120 617510 561050 763770 675110 685900 938320 471740 433030 310390 349470 295610 606920 381840 430470 344950 683230 655590 751070 634690 601850 759630 682240 700230 919240 484350 464050 322460 371670 310110 601620 381000 412980 328340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 442960000 3815 3606 3636 7036;7037;7038 5772;5773 5773 2 9606 Homo sapiens -0.04056497139379189 DGDFENPVPYTGAVK Unmodified 1607.7468 0.74675201 3526 V9HW71;P30040;F8VY02 HEL-S-107;ERP29 Endoplasmic reticulum resident protein 29 yes no 0 0 0 4.5 0.5 1 1 54.701 54.74 2 2.1878E-05 16117 20230619_1883_Aki_TMTPro18x_K_F4 132.32 114.46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3816 3526 3637 7039;7040 5774;5775 5774 2 9606 Homo sapiens -0.03281149452527643 DGDGTITTK Unmodified 906.42944 0.42944062 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;Q9BRL5;A8K1M2;M0QZ52;G3V479;F8WBR5 CALM3;CALM2;CALM1 yes no 0 0 0 2.5 0.5 1 1 38.36 38.419 2 2.594E-05 8921 20230619_1882_Aki_TMTPro18x_K_F3 172.23 120.54 187840 71552 283800 290520 408560 389800 287900 477610 295150 181670 386750 575840 282890 417060 366540 108340 591960 519720 173840 67440 282120 276340 410490 388170 298160 473460 303280 211220 389400 560350 297430 418610 382150 137790 563700 489540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 182390000 3817 2325 3638 7041;7042 5776;5777;5778 5777 3 9606 Homo sapiens -0.027516924784436014 DGDGVPGGGPLSPAR Unmodified 1350.6528 0.65279205 106 A0A2X0SFA4;A0A024R0R1;M0QZR4;A0A8V8TMH9;Q92888-2;Q92888;Q92888-3 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes no 0 0 0 3 0 1 42.98 43.045 2 0.0029717 10960 20230619_1882_Aki_TMTPro18x_K_F3 77.74 57.411 28427 18936 24512 30196 29020 29950 30129 29259 34496 41480 48011 54070 50096 42365 42779 40977 54027 51679 26226 17439 25326 29544 29813 30283 30456 30278 35458 41631 48748 53876 50713 44022 44236 41811 51568 48980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23818000 3818 106 3639 7043 5779 5779 1 9606 Homo sapiens -0.00850823764130837 DGDILGK Unmodified 716.37047 0.37046918 1453 A0A384N6A4;P61604;A0A024R3X7;B8ZZ54 HSPE1 10 kDa heat shock protein, mitochondrial yes no 0 0 0 4.5 1.12 1 1 1 1 47.255 47.325 2 0.025129 12732 20230619_1883_Aki_TMTPro18x_K_F4 102.72 45.16 3155900 1864800 3205400 3753200 4473400 4389300 3824600 4072300 4523800 3629000 4837300 4635400 3216700 3922400 3697400 2411000 5130100 4625400 2913500 1724200 3273700 3639200 4525100 4380800 3916300 4170200 4576500 3723400 4876200 4633000 3366600 3987200 3822800 2576000 4891100 4371600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7225199999.999999 3819 1453 3640 7044;7045;7046;7047 5780;5781 5781 2 9606 Homo sapiens 0.0009387601791104316 DGDLIATK Unmodified 831.4338 0.43379771 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-2;O43852-4;A0A024R755;B3KNG6;O43852-10;O43852-6;O43852-15;O43852-8 CALU Calumenin yes no 0 0 0 3.5 0.5 1 1 45.93 45.99 2 0.0024576 12317 20230619_1882_Aki_TMTPro18x_K_F3 126.41 80.694 272000 157200 221310 272740 268550 379150 274170 298350 525780 349400 399980 673930 574040 578810 281890 463230 862170 944500 250660 145040 230160 267000 276690 373030 283710 311800 515900 360790 425270 665120 567850 594240 324740 493620 819880 891690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 243410000 3820 2386 3641 7048;7049 5782;5783 5782 2 9606 Homo sapiens 0.011338167351368611 DGDSVMVLPTIPEEEAK Oxidation (M) 1844.8714 0.87136018 3527 V9HWC7;P30041 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 1 0 2.5 1.12 1 1 1 1 57.212 57.226 3 5.991E-10 17301 20230619_1882_Aki_TMTPro18x_K_F3 141.55 115.69 124920 95336 111100 142820 147220 174310 144470 156570 161740 175580 203880 215750 192180 185350 182560 235590 199690 234670 115360 87680 114760 140630 150120 173370 146400 161660 165510 177620 206770 216240 196200 194710 187080 235720 191140 222770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1178000000 3821 3527 3642 7050;7051;7052;7053 5784;5785 5785 2190 2 9606 Homo sapiens -0.017280648181440483 DGDSVMVLPTIPEEEAK Unmodified 1828.8764 0.87644556 3527 V9HWC7;P30041 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 0 2 0.816 1 1 1 61.371 61.385 3 6.7272E-14 18976 20230619_1882_Aki_TMTPro18x_K_F3 163.8 136.78 322070 255720 291750 369620 290200 399000 362960 377560 416750 474820 418670 520200 527300 472890 424090 567910 564610 666400 297520 235050 299470 364060 304240 400420 363430 389780 422080 475960 434870 524130 530150 494440 441630 574180 539560 631540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2332400000 3822 3527 3642 7054;7055;7056 5786 5786 1 9606 Homo sapiens -0.0048376095551248 DGDSVMVLPTIPEEEAKK Unmodified 1956.9714 0.97140857 3527 V9HWC7;P30041 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 1 4 0.816 2 2 2 57.189 57.221 3;4 7.4296E-10 17298 20230619_1882_Aki_TMTPro18x_K_F3 139.29 124.04 114050 89868 113580 120830 111200 139020 143100 130460 150210 161060 152690 171250 169560 147240 163950 189220 177620 205190 105430 82538 115470 119700 116650 138940 142620 134720 152810 161430 157440 172540 172290 154910 167720 190280 170010 194620 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 499690000 3823 3527 3643 7057;7058;7059;7060;7061;7062 5787;5788;5789;5790 5787 4 9606 Homo sapiens 0.031201725156506654 DGDSVMVLPTIPEEEAKK Oxidation (M) 1972.9663 0.9663232 3527 V9HWC7;P30041 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 1 1 5 0 1 53.358 53.43 3 0.019607 15237 20230619_1885_Aki_TMTPro18x_K_F5 71.685 61.404 14507 16365 14567 19020 19108 22239 18707 19206 22912 21697 26416 22353 22223 20021 20876 26962 26031 31996 13447 14990 14891 19025 19492 22175 19016 19896 23232 21820 26723 22612 22762 21102 21573 27240 24897 30315 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11063000 3824 3527 3643 7063 5791 5791 2190 1 9606 Homo sapiens 0.018758686530418345 DGDYRDQDYR Unmodified 1301.5273 0.52725718 1108 A0A0S2Z4W4;Q7Z3D7;P98175-2;P98175;P98175-5 DKFZp686E2459;RBM10 RNA-binding protein 10 yes no 0 0 1 1 0 1 31.275 31.275 3 0.00018597 6480 20230619_1880_Aki_TMTPro18x_K_F1 113.44 97.191 41455 26323 32958 45175 53596 55481 52334 55346 78784 53747 67132 64676 69213 60059 54203 50805 77093 74397 38213 24272 34575 44161 54044 55292 53620 56493 78202 54796 69470 64999 69892 61645 56619 52541 73522 70423 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52032000 3825 1108 3644 7064 5792 5792 1 9606 Homo sapiens -0.11144535620383067 DGEDLMDESVLK Oxidation (M) 1365.597 0.59697623 898 A0A590UJ56;A0A590UJR3;A0A590UJ50;A0A090N7U0;Q13616;A0A590UJ21;B3KTW0;A0A590UJC4;A0A590UK34;A0A590UJA0;A0A590UJM8 CUL1 Cullin-1 yes no 0 1 0 1 0 1 50.48 50.48 3 0.054262 14550 20230619_1880_Aki_TMTPro18x_K_F1 48.513 34.607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3826 898 3645 7065 5793 5793 511 1 9606 Homo sapiens -0.07119837786649441 DGEDQTQDTELVETRPAGDGTFQK Unmodified 2636.1838 0.1837972 1147 E3UN97;A0A2I6J4B1;A0A1W1B5Q9;A0A1W1B5P4;A0A1D8MAR2;A0A455JTQ2;A0A1D3KYM1;A0A173ADK6;A0A0U5PXQ4;A0A7D5H2K1;A0A7R9KAH2;A0A7R9PSR9;A0A0S4XQY3;A0A4P2SS15;A0A4P2SSH9;A0A6B7FUX4;A0A6B7HGN6;A0A6B9MMF8;A0A6C0SH12;A0A6M4AA77;A0A2U3QLK0;A0A5H2UEZ4;A0A858LHP1;A0A2H4WPZ2;A0A1B1LKE5;A0A2P9FIJ6;Q95J07;A0A858LHN0;A0A7U3K2K7;A0A3G2LWQ6;A0A858BAV0;A0A060VD08;A0A060VHC2;A0A060VHD0;A0A858LHP8;A0A7S5GS05;A0A7S5GRV6;A0A7U3L8N8;A0A0D6K972;A0A7S5L7I4;A0A7T3P0T0;A0A1C3PHF4;A0A0S4XQW9;A0A0U5Q0S0;A0A7U3K2N3;A0A0S4XQY0;A0A1C3PH97;A0A1C3PH98;A0A1C3PHA9;A0A1C3PHC8;A0A1G4HQ08;A0A0S4XQX0;A0A858B942;A0A2U3QLP6;A0A7T3RIS7;A0A0N9HRK5;A0A7U3L8C6;A0A0U5Q1Q2;A0A0S4XQU8;A0A060VD16;A0A0D6K9K6;A0A0S2IKY1;A0A7U3K2H5;A0A0S4XQM2;A0A0S4XQP0;A0A0S4XQR6;A0A0K0TQ18;A0A7U3K2H2;A0A1C3PH91;A0A0S4XQR9;A0A7U3K2F1;A0A1C3PHH2;A0A7U3K2H0;A0A7U3K2G2;A0A7U3K2G0;A0A3G1Z2Q6;A0A7U3K2F2;A0A7U3K2I5;A0A0S4XQT2;A0A7U3K2B1;A0A0S4XQV7;A0A1C3PHF2;A0A1D0BSQ3;A0A1G4HPZ1;A0A1D3KYL9;A0A6C0SED3;A0A060VCY5;A0A7U3L8D9;A0A6C0SEA7;A0A6B9WHU5;A0A6B9WFF6;A0A6B9VUB6;A0A6B9KHB8;A0A0S4XRV2;A0A0U5PZ31;A0A858B8J5;A0A858B907;A0A7U3L8P7;A0A6B9KGV8;A0A3S6RI33;A0A3S6RI04;A0A858B925;A0A858B842;A0A6B9KNP2;A0A6B9VR84;X5MFD7;A0A6B9KAI8;A0A6B7HG58;A0A6B7HFR9;A0A6C1HWN0;A0A6C1HWM2;A0A6C1HWG8;A0A7U3L8N4;A0A6C1HWG5;A0A858B763;A0A7U3K2M4;A0A090KKC3;A0A7U3VI76;A0A6C1HWE5;A0A6C0VB37;A0A6C0TKS0;A0A6C0SGG6;A0A3S6RHQ5;A0A0S4XQX6;A0A6B9KFK9;A0A1G4HPZ0;A0A6S7YB88;A0A0S4XQY1;A0A1G4HPV3;A0A286RNI7;A0A1G4HPU6;A0A0U5Q331;A0A1D0C3Y2;A0A1G4HPY8;A0A0U5PU71;A0A1G4HPW4;A0A1D8MAN8;A0A1C3PHG3;A0A1C3PHG8;A0A1D8MAL2;A0A858B927;A0A1D3KYM2;A0A0U5PXI8;A0A0U5KK56;A0A0U5PYZ0;A0A0S4XRG6;A0A0U5PXL2;A0A0S4XR94;A0A858B956;A0A858LFL1;A0A858LGA7;A0A0S4XR96;A0A0S4XRD4;A0A858LGC0;A0A858LGT7;A0A0S4XRI5;A0A0S4XRI6;A0A0U5PXM5;A0A0S4XRT2;A0A0S4XRW0;A0A0U5IHK3;A0A0U5IHQ3;A0A2U3QLM4;A0A1L5LC12;A0A6B7KV80;A0A2P9FIN2;Q8SNC6;M4RMN4;M4R8V8;M4R8T6;D8MIW0;A0A286LDB0;A0A286RNH0;A0A090JY51;A0A286RNH2;A0A286RNH6;A0A286RNH9;A0A291HVI4;A0A291NGK6;A0A286LDB1;A0A223FL01;A0A858BAV9;A0A1Z1VXF7;A0A3S6RF48;U6ER51;W0HE66;B1PKY1;C5IWZ2;D5H3U1;D5H3U2;D5H3U3;D5H3U4;D5H3U6;D9UB11;A0A286LD90;A0A1W1B695;A0A286LD96;A0A8F5FV40;A0A286LD97;D7GM35;Q9GIP0;A9QVM4;A0A286LD98;A0A1G4NQS3;A0A1W1B663;A0A3S6RHP3;A0A1W1B5T2;A0A2K4Y3H1;A0A2H4ZAS3;A0A2K4N853;A0A2K4N814;A0A2I6SQU3;W8Y4A2;A0A2I6J4D9;A0A2I6J4A6;A0A7R9PTL5;A0A2I6J4D4;A0A7U3K2I6;A0A7R9PTI9;A0A7R9PT89;A0A2H4WPY7;A0A2H4WPW6;A0A2K4N860;A0A2I6J4B0;A0A7R9KAX6;A0A2K4Y3F8;A0A7U3K2I8;A0A2P9FIH7;A0A1S7SKC6;A0A291NGN0;A0A2D1CHG2;A0A125R6G4;A0A2H4UK40;A0A2P1CXW7;A0A2P9FII5;A0A2P9FIG8;D0V0C4;A0A2P9FIG5;A0A2P9FIF6;Q5MCQ6;A7MAP4;A0A2P1G6E1;A0PBY5;A0A167RN11;C5IWY0;A0A223PYB8;A0A223FLI6;F4NCR9;A0A3S6RFH2;A0A2U3QLH6;A0A2Z4C138;A0A330NMI6;A0A3Q9B4Q6;A0A3S6RFI0;A0A3S6RFH9;A0A2U3QLI6;A0A3S6RFD8;Q5SUL5;Q5S3G3;Q2LC93;Q2A689;A0A3S6RF85;X5MI15;A0A386IRN0;Q2A688;A0A2U8RNL0;A0A2S1B6U6;A0A2S1B6V2;A0A2U3QLL2;A0A2P9FIS3;A0A2U3QLQ4;A0A2U3QLM0;A0A2U3QLH8;A0A2U3QLI3;A0A2U3QLL9;A0A2U3QLL3;A0A2U3QLJ9;A0A2S1B6V5;A0A2U3QLI9;A0A2U3QLH4;A0A3S6RF33;A0A2S0SYS7;A0A2R3STY5;A0A2U3QLG6;A0A2S1B6V6;A0A8E4J507;A0A2P9FIR9;A0A2P9FIS9;M4QEH4;A0A345F0V2;A0A3G8GE10;A0A3S6RF29;A0A1S5UXJ4;A0A2P9FIP7;X5MPH3;I3ZN77;Q5ZGM8;X5MBH2;A0A8F5J0E1;A9YWM1;D9UB10;B2MVI0;B2R7U3;B6ETN7;C5IWX4;H2DMX5;X5LKD6;A0A346MPT7;A0A3S6RF59;A0A346MPT9;A0A346THJ1;A0A0D6K9L7;A0A375B7T7;A0A8G1LT45;A0A3G2LWU0;X5MFE4;A0A858LKF4;Q95HA5;A0A3G4R8Q7;A0A3G6IIS6;A0A3G6ILP0;A0A7U3K2M2;A0A7U3K2L8;A0A7U3K2K3;A0A7U3K2J7;A0A6B9KAH8;A0A6M8PV20;A0A7U3K2H6;A0A678ZWM0;A0A4P2SSM5;A0A4P2SSK8;A0A4P2SSI7;A0A5H2UF95;A0A678ZMH4;A0A678ZMY4;A0A678ZVJ3;A0A678ZVN3;A0A678ZW80;A0A678ZWL7;A0A678ZWM3;A0A4P2SSP6;A0A678ZZC3;A0A7R9PTI1;A0A678ZH97;A0A678ZZI0;A0A6B7FSY7;A0A6B7FT87;A0A6B7FTG2;A0A6B7FTH0;A0A678ZI33;A0A678ZZD8;A0A4P2SSN8;A0A4P2ST76;A0A678ZGZ9;A0A4P2STQ9;A0A4P2SRE5;A0A4P2SR70;A0A4P2SR52;A0A4P2SR01;A0A455JTM2;A0A678ZM25;A0A455JS07;A0A455JRX1;A0A411GA17;A0A411CX79;A0A4P2STU3;A0A5H2UHK1;A0A4P2SS00;A0A4P2SS53;A0A4P2SSE9;A0A678ZKK9;A0A678ZIN6;A0A678ZIC5;A0A678ZIA4;A0A5H2UI54;A0A5H2UHU6;A0A4P2SQV2;A0A5H2UYT5;A0A5H2UV00;A0A4P2SRS4;A0A2H4RK80;P04439-2;A0A6C0SGK5;Q6IV48;A0A678ZGK4;A0A5H2UTB6;B7ZAP7;A0A6B7FVE5;A0A0S4XRG0;Q29840;Q6IVJ5;A0A7U3L8M6;Q6IVJ6;A0A1Z2R893;J7SA67;Q5SRN5;A0A583ZB79;A0A583ZB34;A0A0G2JIF2;A0A3S6RFJ2;A0A3S6RHY6;A0A1W6C2M7;P04439;A7LB37;A0A5H2UIC5;A0A5H2UYR7;A0A5H2UIF3;A0A5H2UT43;A0A5H2UU86;A0A5H2UUF9;A0A5H2UUH1;A0A5H2UYZ3;A0A5H2UI71;A0A5H2UYJ8;A0A5H2UYK0;A0A5H2UYP3;A0A5H2UYS7;A0A7U3L8N3;A0A5H2UUW3;A0A678ZZE9;A0A5J6CZG2;A0A678ZH10;A0A678ZGT6;A0A678ZGN3;A0A649ZU83;A0A4P2STV7;A0A7U3L8J5;X5MI21;A0A4P2SRG9;A0A5H2UYS1;A0A5A4LK74;A0A7R9KAM5;A0A7R9KC42;A0A7R9KC32;A0A7R9KBA2;A0A1Z2R875;A0A7R9KB10;A0A7R9KAD9;A0A7R9KAX0;A0A7R9KAQ5;A0A6S7YP09;A0A4Y6GTZ7;A0A7R9KAK2;A0A6S7YTK2;A0A7R9KAI8;A0A7R9KAI7;A0A7R9KAG9;A0A7R9KAE6;A0A7R9KCP8;A0A7R9PSQ5;A0A6S7XX17;A0A6S7XX07;A0A6S7XU09;A0A6S7XTF4;A0A7R9KAV3;A0A6G7S6I1;A0A0S4XR33;A0A6B7HHT7;A0A238TQ66;A0A6B7HGN9;A0A6B7HGQ0;A0A6B7HGQ4;A0A6C0SGT3;A0A6B7HGN4;A0A6B7HGG7;A0A5H2UF78;A0A6B7IBZ7;A0A6B7HGN3;A0A6B7HGG8;A0A6B7HHU7;A0A6B7IDW6;A0A6B7HGE9;A0A0U5Q074;A0A6C1HXA0;A0A6B7IEM1;A0A6B7IFL7;A0A6B7IFQ5;A0A6B7KQ45;A0A6B7FWJ4;A0A6M5WPK7;A0A6G7S6J8;A0A7L7TX66;A0A6H0Y7F3;A0A6B7FU34;A0A6B7FTH7;A0A7L7TND1;A0A7L7TR54;A0A6B7FUZ8;A0A4V0NP68;A0A6M4EQQ7;A0A5A4LH43;A0A5A4LHD7;A0A7R8ND24;A0A5A4LIR8;A0A4P8D7F1;A0A583ZB21;A0A4Y7LIQ4;A0A5A4LJ79;A0A5A4LLH1;A0A5A4LTQ0;A0A5A4LTS8;A0A5A4M307;A0A5H2UEH6;A0A5A4LLE3;A0A5A4LLF6;A0A5H2UF23;A0A6B7FUW9;A0A5A4LI86;B4DVC4;A0A7R9PT76;A0A7L7TXC4;A0A7D3UWS0;A0A7D5DVF6;A0A7R9PSV1;A0A583ZB83;A0A7R9PSY4;A0A7G4RN38;A0A7G4WM27;A0A7L4X6X6;A0A7L4X795;A0A7R9PSZ4;A0A7L4X7E9;A0A7D7QND4;A0A4Y5WSJ0;A0A7L7TUL6;A0A6B7FVM4;A0A7L4X7H4;A0A7R9KB27;F6IQZ5;A0A5A4M334;F6IQX4;A0A5J6CX62;A0A4P2STA1;A0A5H2UF70;A0A5J6VAS1;A0A5Q5ADF6;A0A583ZAW1;A0A4P2ST16;A0A514QQ52;A0A4Y7LMX2;A0A5H2UV18;F6IQZ3;F6IQW8;A0A5A4LK96;A0A583ZB92;F6IQX7;A0A5A4LHG3;F6IQZ4;A0A5H2UUV9;Q29689;A0A5A4LJA0;A0A5H2UUG5;Q9MY51;A0A5H2UFF7;A0A5A4LLF0;A0A4Y5P8Y7;M9QZ33;A0A8F5FUX2;Q29907;C5IWY5;C9EIW0;F6IR15;C5IWY4;F6IQY1;F6IQX1;C5IWY3;F6IQZ6;Q708C4;Q9TQ74;E5FQ47;A0A8E4J3X0;X5D2K4;A0A3S6RF10;F6IQY0;D5H3U8;D5H3U9;D5H3V3;F6IR23;D9UB08;A0A7T8GEE8;A0A4Y5ULL4;A0A6S7XTY7;A0A7D5U624;A0A7G7XYK9;F6IQX0;B1PKY3;F6IQX6;D9UAY1;Q95J06;A0A649UPT4;Q8MGZ1;A0A3S6REZ3;A0A6M4C6H9;A0A3S6RFA8;A0A678ZVI9;A0A678ZVR7;A0A678ZH46;A0A678ZWD9;A0A678ZWE9;A0A678ZZG5;A0A6B7FT63;A0A6B7FTB7;A0A678ZKN1;A0A678ZGW5;F6IQZ0;A0A6M3YRX8;A0A6H0Y7A3;A0A6B7IE46;F6IQZ1;A0A6B7KQ33;A0A678ZVM5;A0A678ZVI4;A0A6M8PHV3;A0A678ZNU6;F6IQX2;F6IQY5;A0A6B7ICX9;F6IR10;A0A6B7HGP6;A0A6B7HGP5;D3YFD2;E1Y7G0;E1B2D6;E0YW13;A0A6B7HGK8;F6IQY8;A0A678ZVP6;A0A678ZLG1;A0A678ZM81;A0A6N0A1S6;A0A6B7HG31;A0A3S6RFC0;A0A649ZV15;A0A4P2SRY5;A0A4P2SRW8;A0A4P2SRR6;A0A4P2SRH7;A0A678ZGN8;A0A4P2SQZ3;A0A6B9VR96;A0A3S6RFH1;A0A455JVW4;A0A455JVN8;F6IQX3;A0A410JA26;A0A3S6RIB1;A0A4P2SQQ2;A0A4D6P079;A0A649XW30;A0A6B9VT42;A0A6B7HHR8;A0A4P2SR03;A0A6C1I636;A0A6C0THY7;A0A6C0SHE6;A0A6C0SGL7;A0A6C0SEA1;A0A6C0SE86;F6IQZ2;A0A6B9VTR1;A0A678ZGK2;A0A6B9RW39;A0A6B9MYT7;A0A6B9MYI0;A0A6B9MMH3;A0A6B9KAN4;A0A6B9HR00;A0A7R9PSY1;A0A0U5IHR8;F6IQZ8;A0A0U5Q0T4;A0A0S4XQU2;A0A0A8R645;A0A0S4XQV8;A0A0S4XQV4;A0A0G2R211;A0A173ADJ6;A0A0S1MSS0;A0A0S4XQP3;A0A858LHR6;A0A0U5Q1V3;A0A1C3PHA5;A0A2K9UYT2;A0A2H4RK91;A0A2H4WPX6;A0A2H4WPY0;A0A0S4XRI7;A0A109QAI7;A0A7R9KAL6;A0A109Q9J9;A0A858LH71;A0A858LNP5;A0A8E4J3N5;A0A0S4XQY5;A0A0S4XRV0;A0A0S4XRQ7;A0A0S4XRN8;A0A0S4XRM0;A0A0S4XRL3;A0A0S4XRH9;A0A0U5PUM0;A0A0S4XR73;A0A0S4XR02;A0A0U5Q086;A0A0Y0GTU3;A0A2H4WPZ8;A0A2H4ZAS9;A0A286LDA7;A0A090CXP3;A0A1W1B5W6;A0A1C3PHT5;A0A1C9UPQ3;A0A1W1B6J1;A0A386IRL1;A0A1C3PH90;A0A286LDA3;A0A223FL78;A0A223FL67;A0A223FL08;E0WN84;A0A223FKZ7;A0A1Z1VXF6;A0A1Z1VXE9;A0A223FL72;A0A1D8MAS0;A0A1D8MAP1;A0A3S6RHK9;A0A2Z5BTT3;A0A2P9FIT1;A0A2U3QLE8;A0A2U3QLG4;A0A2U3QLL1;A0A2H4ZAT7;A0A2U3QLL7;A0A2P9FIH2;A0A1D3KYH0;A0A286LDA6;A0A286LDA5;A0A286LDA4;A0A1C3PHB3;A0A346HFZ7;A0A1C3PHB5;A0A3G2Y4K4;A0A3G5BD46;A0A3G6V369;F6IR02;F6IQR9;F6IQS0;F6IR20;F6IR12;F6IR13;F6IR11;F6IR14;A0A7R9KD30;A0A7R9PTM2;A0A7L9VYC9;A0A7S5GRS2;A0A7S5GS66;A0A7S5GSM8;F6IR16;A8YQE6;F6IQX5;F6IQY2;F6IR19;F6IQW2;F6IQV6;F6IR22;F6IQV7;A0A7R9KAM7;F6IQW0;F6IQW1;F6IR09;F6IQW7;F6IQW3;F6IQW5;A0A7R9KAP8;A0A7R9KB37;F6IQV9;A0A7R9KCK8;F6IR06;E0WN91;F6IR00;A0A7S5L7R1;A0A7L7TMQ7;A0A7L7TRP2;F6IR03;F6IQZ9;A0A7U3K2D3;F6IR31;A0A858LGC9;A0A858B865;A0A858B753;A0A7U3L8Q2;A0A7U3K2K0;A0A7U3K2H1;A0A7U3L8I6;A0A7U3K2F6;A0A7U3K2E4;A0A7L7TMP1;A0A7L4X732;A0A7S5L7U0;A0A8E4NFK8;A0A8F5CF39;A0A7R9KAF6;A0A7R8V9S8;A0A7R8RJC5;A0A8E4NFJ6;F6IR04;F6IR05;A0A7U3K2C4;F6IR01;A0A8E7F1X6;A0A8F2EWC2;A0A8F2PMX5;A0A858LHL7;A0A7L4X6Z6;E0WN90;J7HDW9;A0A078BNH2;A0A1G4P1W1;A0A1P8SNL2;A6YT92;A0A1G4NR30;A0A1B1UZJ8;A0A1G4NQQ7;A0A1G4HPS6;A0A1D6ZNI8;A0A1C9LUP6;A0A1C3L6B0;A0A1B1UZK6;A0A1P7ZSR8;A0A1P7ZSS7;A0A2L2DGX7;A0A2P1CQD6;A0A286R107;A0A2D1WB98;A0A2Z6IEZ1;A0A343J4V7;A0A343J4V8;A0A2R4KZU9;A0A0S2UQ67;A0A3G8GE25;A0A1P8SNK9;B5A9M9;M9T819;A0SXS8;A0A143Y4R2;U5YMJ4;U5YMI9;U5YMJ8;U5YML8;U5YMP4;U5YMP9;U5YMQ3;U5YMQ8;U5YJJ6;U5YJK6;A0A385NKT9;A0A4P8VUH0;Q95IG4;A0A6G6CDI9;U5YJL3;A0A583ZAV5;A0A1Z1EGK5;W9AAG4;F6IR07;F6IR08;A0A7R8RJC0;A0A1W7IP21;E0WN60;A0A0F7DDK2;M4TCH1;A0A110BH75;C4PFW7;A0A142J2H9;M4X2U5;A0A125RL90;A0A110BIQ6;A0A110BIH1;A0A142J2I1;I6R2W1;M4VSN7;M4RCG9;A0A060GQ71;M4R8V2;M4NUQ2;A0A142J2I0;M4NJM4;A0A3G9H9G9;A0A3T1DFS0;A0A140CTI6;M5A8I6;M5EE32;Q3YBM1;A0A0S2C4N3;A0A0S1YF58;A0A0P0HDI3;A0A0N9R1U5;A0A060GTH2;A0A060N342;A0A076L0P9;A0A076V2L0;A0A0G3EHK9;A0A076V7U7;A0A077YIJ7;A0A078BPG3;A0A097F1T0;A0A097PED7;A0A0F7RPE2;A0A0H5CW52;A0A0H5CWT9;A0A0K2GVF7;A0A0N9E2I7;A0A0N9MQ43;A0A0H3WB50;A0A0N9QYF2;A0A0N9QYE2;A0A0N9QNI4;A0A0N9QYZ0;D5H3U7;D5H3U5;D0AB29;A0A076JS26;Q860B4;A0A0D6K9K8;A0A0D6K9D3;A0A6M8DJN3;U4PDP4;A0A0M7RFC2;A0A090KKK5;G0Z6Y6;A0A345F7A6;A0A076JXB7;A0A1W2PS24;A0A1V0EFF3;A0A0K2CWW0;Q5D1X1;Q0E7X7;A0A0G2JI36;Q6IVJ7;Q6IVJ8;Q6IVJ9;A0A345F7A8;A0A143Y4D5;A0A5B9QYU6;A0A7U3W2F8;A0A6B9HBN1;A0A5P8I434;A0A6M6AMD7;A0A7T3RIT5;A0A0D6K978;Q860B5;A0A7T8G1R7;Q7YPW4;C0KLT0;A0A142J2B1;Q861B7;A0A345F7A9;B7VF83;A0A650AP25;G9FTK2;W0HII0;A0A0D6K9L8;A0A0S2IIT2;A0A0F7NJH7;A0A2P1CQG7;A0A218N9T3;A0A649ZUY7;L8B934;A0A0D6K959;A0A8F4GDW7;A0A1V0EFF9;U5YJQ7;U5YKF4;U5YME5;U5YMF0;U5YJL1;D5H3V9;U5YKF9;A0A1D3TZM3;U5YMI0;U5YMI4;D5LN74;U5YKG4;U5YJK1;A0A1V0EFI3;U5YJH0;B1PT16;A5PHT7;U5YKC8;A0A866W2Z2;D5H3V8;U5YJP8;A5PHP7;U5YJQ0;U5YJQ4;U5YKG9;D9UAY2;D9UAY3;A0A4P8D7G8;A0A1V0EFG6;A0A1G4HPU0;A0A0A1EAW8;Q5SRN7;A0A143Y239;Q14SN2;Q2L4F0;A0A5P8I410;A0A6M6CC39;Q6IUZ4;A0A0U5LBS5;W5ZPB5;A0A0K3AQ92;Q0E7X3;A0A060VCY7;Q5ND69;A0A583ZB55;D6CIB9;D6CIC1;A0A1Z2RP28;D6CIC0;M5ETC1;M9TIT3;D3JW65;A7MAK2;A4GWZ0;A4GWZ1;A0A7T6AP80;A4URG8;Q9BCN8;E3Q0X4;A5PHT4;A5PHT9;A7L858;A7MAE2;A7WPI8;A2VBZ7;F2XI30;G8ZKX4;C7C695;C7C6D3;C7E539;E7BJ52;E9ABX3;F2XI28;A8E0Y3;A9QUT7;A2VC06;A2RQE0;M9TNT6;B0FWH0;B6VA01;B6VA02;B7VBV1;B9VJL7;C0MP56;C1KBJ6;C6H0N6;C6H0N8;B1Q4X2;C6L836;A9IW15;A2Q117;C3VAL4;A0A4P8L8W6;A0JHM7;A0A514YDS8;A0A514YDT1;A0A5H2WUX1;A0A5J6BTF9;A0A6C0TJ32;A4URF2;A0A4Y6GU97;F2XI31;F2XI33;Q9TQP8;D1MZT7;C7EW70;C7EW71;C7U1K2;C7U2Z0;E3WH33;G9FTJ8;D0VFI1;D5H3W2;D1MYY8;D1MYY9;D2KZ53;G8FV57;D2KZ55;I1U8N0;A5I8L2;D0W032;D5H3W3;D6CIB2;D6Q0R2;D9UC12;E0WMN1;E0WN57;C7ENH9;E2G792;D0RB02;C9E9Y0;G8FRJ5;G8FQ53;G4V593;G0UE14;F2XI32;G0M6G1;F8LSY2;F8LSV3;F8LSV2;F5CIU1;F2XI35;F2XI34;F8T1H2;A0A0F6SCZ8;G9DBG6;H2D5G2;H2DEU0;H6SSQ0;H9C3L3;I0DFI9;E7BBA1;B6ECH6;B6ECH3;B6ECH2;J7JGT4;Q2PP85;I1VXL8;L7UVL0;L7QJU3;L7QJ97;L7QJ95;K7SHJ4;W6CHX3;J7SBK9;J7JHS1;J7I2U3;L7V338;J7HGX9;F6IQW9;L7X986;L7Y4K8;M1KDJ9;Q6AW25;W6CGW3;W0G8I7;W0FBM8;V5V1E3;Q4W6C0;I6QYX3;I6M4H5;I3Y3J5;N1NRX6;Q4W5U0;Q0E7X5;Q0GC70;Q1EJP6;Q1EPW2;Q25BN7;Q4A1H0;I7H3R1;I7B4Y2;I6R2V6;M5EFF5;Q4ZG93;M1LMH3;Q5NTA9;M1KE04;M1K8H4;I2GUK1;I2E8C4;I3TBB8;I3VB21;V5L1W2;U6BZQ8;B2DFW8;B1Q4X5;R9WYX8;B3VE20;R9UTP9;R9UR01;R7RVB7;R7RV73;R4NJ42;R4KXX0;I1U8N1;I0DHJ2;B3VE19;T2MJM6;B3IYE6;B2ZRD4;B2NJ13;A0A6B7HGP2;B2NIY8;B2DFW7;B2DFV0;B2DFH6;B2DFH5;B2DFH4;S0F2B1;S0F2B5;S0F2B7;Q95IG6;T2BQE4;S6B3R2;Q6F3E3;Q6F3E2;U3R9Y1;K7W4U9;W6CJ57;W6SIV4;S5U3G8;X2J8Y7;X4YT82;X5EM81;S4VA55;S5CRT1;I7HCZ5;W8NKP1;Q6L675;Q8HWT0;A0A6B9VTX5;S0F2I4;Q8MGZ8;F6IQW6;A0A2H4WPY5;A0ZXY8;I0J2M4;A0A5H2WTZ8;A0A4P2SRG2;A0A4P2SQT5;A0A2Z6DS69;A0A6G9W1F6;A0A3S6RIB2;A0A5H2UEP3;A0A678ZGM1;F6IR24;F6IQW4;F6IQZ7;A0A6B7FWW8;A0A286RYQ4;A0A5H2UYS3;N1LK74;A0A410P8C3;A0A8E4J3R5;Q0MSI1;F6IR32;A0A6B9HSD8;A0A6B7HGI7;A0A4U9C372;A1Z1D7;A0A858B9G6;I2GAD6;A0A6F8Z9L3;A0A6B7HHU0;A0A7S9C280;A0A7S5GSJ7;A0A2K4ZRK0;O15506;B4DVB9;A0A060VCW6;A0A060VCX2;A0A3G2LWR5;A0A0F7W082;A0A8F4G8X1;X5MBH7;A0A060VCZ3;L8B936;A0A411J078;A0A583ZAY5;A0A060VD10;A0A060VCY6;B7ZA80;A0A181C4Z2;A0A3B0PDB1;A0A8F4GAB4;A0A583ZB89;D2KZ37;A0A8F4JG78;A0A866VWG0;A0A060VCZ1;A0A1W2PQD0;Q2L4E7;A0A060VG42;A0A8F4G6S8;A0A1D8QKY3;A0A8F4G6Q4;E7AJF9;A0A090MEX8;A0A387LBR7;A0A1W2PSE7;Q59GJ2;A0A0G2JL56;B4E2X4;V6CKU4;D9UB05;A0A346FLI0;A0A223FKW4;A0A386RW46;A0A386RVU2;A0A0S2IIQ9;A0A386RUJ7;W0UTP4;Q861E7;L8B932;A0A0S2IIV1;A0A346FLH9;Q9GJ43;A0A5Q0QGD1;A0A5J6MBG1;A0A0S1Z204;A0A1S6Q4A9;A0A180K1E1;A0A061DD14;O19642;A0A4P2SSK0;A0A061DEB5;A0A858BB14;A0A0S1Z1X8;A0A5P8I429;A0A0S4XQY4;A0A0S4XQW8;A0A4P8JGQ9;A0A223FL90;A0A223FL85;A0A223FL14;A0A223FL07;A0A0U5IHM5;A0A223FKX1;A0A223FKY8;A0A142J2B4;A0A2H4ZAU7;A0A0U5PZ65;A0A220IGB9;A0A218NI37;A0A212MH17;A0A4P2STY4;A0A0U5KJ66;A0A142J2H5;A0A223FLI8;A0A0U5KJ30;A0A4P6N0H4;A0A1Z2RTQ8;A0A1Z2RTN7;A0A1Z2RTL3;A0A0U5PZ83;A0A4P8DJ78;A0A4P8DJ99;A0A4P8DJP6;A0A0U5Q047;A0A0S4XQW5;A0A0S4XQV3;A0A0U5Q0A7;A0A1Z2RTK7;A0A0U3A4R9;A0A0U5Q035;A0A2H4WPX0;A0A4P8DJR2;A0A2H4ZAU2;A0A0S4XQX3;A0A223FKV7;A0A1Z2RTQ9;A0A6C0SGD6;A0A6C0SGQ9;A0A0U5Q0A6;A0A1W6C2K7;A0A6C0SDI7;A0A0U2S4I2;A0A3S6RF03;A0A1V0EFF1;A0A8F4JDU3;A0A0U2XL24;A0A1V0S7J8;A0A1V0EFF2;A0A8F7GNN8;A0A223FKW9;A0A2H4WQ08;A0A291NMV1;A0A1S6Q4B3;A0A8F4G8Y5;A0A142J2H4;A0A142J2H3;A0A142J2B6;A0A866W0W2;A0A142J2B5;A0A142J2B3;A0A1Z2RTP1;A0A1Z2RTN8;A0A4P8D7G0;A0A2P9G7Q0;A0A2Z4BXA6;A0A2Z5HU98;A0A2X0SX88;A0A2X0RE89;A0A2X0RE84;A0A2P9G7M5;A0A2X0T233;A0A2S0SYT7;A0A2S0SYV8;A0A2S1B6P9;A0A2S1B6R5;A0A2S1B6R6;A0A2S1B6T7;A0A2X0RE52;A0A2U3RU97;A0A2U8QNU5;A0A2X0RD23;A0A2X0RD62;A0A2X0RE29;A0A2X0RE38;A0A2R4QL68;A0A346XQW7;A0A2K4X4I3;A0A2X0T4J0;A0A2R4QLB0;A0A2X0SXA9;A0A2R4KPE1;A0A2R4KPA3;A0A2P9G7Q8;A0A2P9G7L9;A0A2P9G7M0;A0A2P9G7L0;C1K0X5;A0A2P9G7M9;A0A2P9G7N4;A0A2P9G7N8;A0A2P9G7P0;A0A2P9G7J9;A0A2R4KPA5;A0A2R4KPE2;A0A2X0SX74;A0A2X0SX97;A0A2X0REQ2;A0A2X0REU7;A0A2X0REX1;A0A2X0RQE2;A0A2X0SX67;A0A2X0REE8;A0A2R4QL71;A0A2X0RD42;A0A2K4XGK4;A0A2K4XGK7;A0A2L0V4H8;A0A2K4X4I9;A0A2X0RD39;A0A2L1DGI0;A0A2L1DGK0;A0A2L1DGK3;A0A2P0W8G0;A0A2L1DGH7;A0A2L1DGH8;A0A2K4XGR8;A0A2K4Y389;A0A6B7KVE5;A0A2P1CQY3;A0A5H2UIN4;A0A4P2SRZ5;A0A4P2SRY6;A0A4P2SRT5;A0A383S1S7;A0A346XQW8;A0A2L1DGH1;A0A2L1DGH0;A0A2L1DGG8;A0A2L1DGG6;A0A2K4XGN6;A0A2L1DGH5;A0A2K4XGK8;A0A2K4XGN3;A0A2P0W8G8;A0A2K4XGJ3;A0A2K4XGM6;A0A2K4X4I1;A0A2K4X4H7;A0A2K4X4G0;A0A2K4X4F8;A0A2K4XGC6;A0A2K4XGL7;A0A2K4XGL9;A0A2K4XGN2;A0A2L1DGH3;A0A2K4XGM8;A0A2K4XGM7;A0A2K4XGD9;A0A2K4X4J7;A0A2K4X4K4;A0A2K4X4K7;A0A2K4X4M3;A0A2L1DGH6;A0A2K4XGN4;A0A2K4XGP3;A0A2P9G7P5;A0A2P9G7Q1;A0A2L1DGG1;A0A2P9G7T2;A0A7D3QEY3;A0A6S7YB32;A0A6S7XXN0;A0A6S7XV18;A0A6M8DGL1;A0A6M6CH05;A0A6G7NU98;A0A6G6CU50;A0A6C1I9M4;A0A7R8C2A3;A0A7L4X728;A0A6C1I9E6;A0A6C1HZE2;A0A6C1HZC8;A0A6C1HXF9;A0A6C1HXE8;A0A6C1HWE3;A0A6S7XV07;A0A6C1I5N0;A0A6S7XSP7;A0A6S7XUM4;A0A6C2E4F0;A0A858LGG7;A0A7D6IWC6;A0A7D7L8Y5;A0A7D7L9A4;Q5QT33;D9UAZ9;E3UPC4;D2EBJ4;G9FZ34;A0A858LGH6;D9UB04;K0P2X1;H8XVX3;I3ZN89;A0A858B9B0;A0A7G7Y1U9;A0A7S9ATW1;A0A7R8C287;A0A7L7TUI7;A0A7L7TNK5;A0A7L4X7J6;A0A7L4X755;A0A7L4X752;A0A7L4X720;A0A6M8NNT6;A0A7H0XMC8;A0A7R8C2B6;A0A7R8C2C4;A0A7S5GRZ5;A0A2P9G7Q9;A0A7R8GUC4;A0A7R8C2F8;A0A7R8GUF0;A0A7R8GUG4;A0A7R8GUG8;A0A2P9G7S7;A0A2P9G7Q5;A0A2P9G7S3;A0A2P9G7R1;A0A2P9G7R0;A0A2P9G7Q7;A0A7R8C2B8;A0A2R4KP99;A0A5H2UIJ3;A0A6B7HHQ3;A0A5H2UJ06;A0A7R8GUC0;A0A7R8GUJ1;A0A7R8GUH3;A0A2P9G7U9;A0A2R4KPA1;A0A2R4KPB4;A0A7R8GUB8;A0A7R8GUB0;A0A7S5L7F1;A0A7R8GUC6;A0A7S5L7K6;A0A858B952;A0A858B987;A0A7T3P0R0;A0A7T7K9R1;A0A7U3NG83;A0A7U3VI70;A0A858B7G2;A0A858B884;A0A7S5L7P9;A0A858B996;A0A7R8GUA1;A0A7R8C2G6;A0A7S5GRG5;A0A7S5GRB2;A0A7R8GUK5;A0A7R8GUJ2;A0A7R8C2E3;A0A7R8C2E6;A0A6V6XYH2;A0A858B9A6;A0A7R8C2N2;A0A2L1DGG5;A0A2L0V4I6;Q546I7;A0A3S6RG43;A0A5H2UFE8;A0A6C0TFP0;A0A6C0THF1;A0A3S6RGG9;A0A3S6RGC1;A0A3S6RGB4;A0A383S210;A0A3S6RGB0;A0A6C1HWB0;A0A678ZMJ6;A0A6B9VTY9;A0A7R9KCS8;A0A6C0SHE8;A0A5H2UF31;A0A6C1I614;A0A6C0SGU2;A0A6C0SDP3;A0A5H2UHV1;A0A5H2UF61;A0A6C0TDF5;A0A5A4LJD3;A0A5H2UTC5;A0A5H2UTA9;A0A6C2E0Z3;A0A6C1I9N9;A0A6C1HXC8;A0A383S261;A0A3S6RG84;A0A383S296;A0A3S6RIK8;A0A455JUC4;A0A455JSA8;A0A410JAM0;A0A3S6RIS9;A0A3S6RIM6;A0A383S2A9;A0A4Y5ULF8;A0A3S6RG54;A0A6C1HWD3;A0A3S6RIK3;A0A3S6RIE8;A0A3S6RIB0;A0A383S1Y5;A0A3S6RGE8;A0A383S252;A0A678ZGM7;A0A3S6RG96;A0A3S6RGC6;A0A6C1HWC9;A0A6B9VS25;A0A6B9VT30;A0A6B9VT36;A0A3S6RGC9;A0A7L4X7A9;A0A7L4X8T3;A0A7L4X7F7;A0A7L4X7M1;A0A7R9KCL8;A0A7L7TNI8;A0A7L7TQR4;A0A7L7TR74;A0A7L7TUJ9;A0A5H2UHY2;A0A7R9KAB5;A0A6S7YP30;A0A7R9KCN6;A0A7R9KC00;A0A7R9KBY1;A0A7R9KC13;A0A7R9KB74;A0A7R9KB65;A0A7R9KB47;A0A7R9KB30;A0A7G7XYL1;A0A7R9KB04;A0A5H2UF09;A0A6C2E3M9;A0A6B9VRL5;A0A5H2UID6;A0A6C0TGS8;A0A7U3K2J2;A0A6B9WE25;A0A6C0SGC6;A0A6B9WGP5;A0A6B9WGQ2;A0A678ZL50;A0A6C0MBN4;A0A5H2UIE4;A0A6C0SGS8;A0A5A4LK40;A0A6C0SDM3;A0A6C0SDM4;A0A6C2E122;A0A5H2UI63;A0A6C0SE92;A0A5H2UI14;A0A6C0SGF8;A0A7R9KAB3;A0A5H2USY9;A0A7M4BHB4;A0A6B9WFG8;A0A383S2Y8;A0A383S3Z8;A0A4P2SS82;A0A383S3X0;A0A5A4LMX6;A0A5A4LL94;A0A493QP74;A0A583ZC31;A0A5H2UGR2;A0A5H2UGM9;A0A583ZC24;A0A383S1R7;A0A4P2SRK0;A0A5H2UG98;A0A5A4LK32;A0A583ZC25;A0A5A4LJY9;A0A5A4LJK6;A0A5A4LI97;A0A5A4LI25;A0A5A4LHX5;A0A5H2UG18;A0A5A4LK18;A0A5A4LJM9;A0A5A4LN61;A0A5A4LNF9;A0A5A4LNY6;A0A4P2SRF9;A0A4P2SRF8;A0A4D6P066;A0A4P8D7H4;A0A4P2SSE8;A0A4P2ST18;A0A455JW36;A0A455JW18;A0A4P2SRL5;A0A4P2SRP7;A0A4V0NP93;A0A4P2STQ5;A0A2K4XGN7;A0A4V0NP90;A0A4P2SUG7;A0A4D6NYX7;A0A4P2SU53;A0A4P2STX4;A0A4P2STA7;A0A4P2SRS7;A0A4V0NP86;A0A455JX05;A0A455JX07;A0A482LZY5;A0A4P2SRN2;A0A493QP70;A0A4Y5FSU2;A0A5H2UGI1;A0A583ZC42;A0A383S358;A0A3S6RG00;A0A3S6RFX8;A0A3S6RFU5;A0A3G5BD31;A0A3G4R8Q8;A0A383S467;A0A383S438;A0A3S6RFZ2;A0A383S393;A0A383S3C1;A0A383S1X7;A0A3S6RG10;A0A383S322;A0A383S1Y7;A0A383S305;A0A383S3R6;A0A383S3V0;A0A3S6RG19;A0A3S6RG64;A0A383S1X1;A0A383S1Z2;A0A383S1W9;A0A583ZBX0;A0A383S388;A0A4P2SRK7;A0A583ZBV8;A0A5H2UG11;A0A383S1X5;A0A383S3Z9;A0A455JVL0;A0A583ZC32;A0A455JVN9;A0A455JVU4;A0A583ZC08;A0A583ZBW8;A0A383S3Y9;A0A4Y7LMZ8;A0A3S6RG26;A0A5A4M3T5;A0A5C0QHA2;A0A5H2UFL9;A0A5H2UFN6;A0A383S400;A0A383S2M3;A0A383S2I0;A0A455JVN2;A0A3S6RG30;A0A5H2UII4;A0A6C0THJ6;M4QNN1;A0A286LD92;A0A223PYA7;A0A0S4T2P1;A0A0S4T2C9;A0A0S4T2B8;A0A0S4T273;A0A0D6K958;A0A0K8K5S4;A0A0S4T3H1;A0A0S4T3G2;A0A0S4T1D1;A0A0S4T1I4;A0A0S4T1H4;A0A0S4T3F5;A0A0S4T1G8;A0A0S4T1E3;A0A0S4T1D5;A0A0S4T183;A0A0S4T1K1;A0A0K8K5S5;A0A0S4T1F0;A0A0U2R0E6;A0A0U5IHT2;A0A0U5KKC2;A0A0U5PU85;A0A0S4T2U5;A0A0S4T3A1;A0A0S4T3I6;A0A173AD40;A0A223PY97;A0A1W1B6F6;A0A1W1B5N2;A0A1N7SXW9;A0A1Z2RTP9;A0A1Z2RTQ2;A0A223PY64;A0A1Z2RTM7;A0A1Z1VXF9;A0A1Z1VXG8;A0A0S4T1M1;A0A0S4T3D8;A0A0S4T1N7;A0A173AD97;A0A173AD55;A0A0S4T1R3;A0A0S4T1U8;A0A0B7NY91;A0A0B7NY86;A0A0S4T1J0;A0A0S4T1K5;A0A0S4T3F6;A0A0U5PUT0;A0A0U5PZ41;A0A0S4T4P6;A0A2K4N8I0;A0A060VCV0;A0A060VCY4;A0A060VD00;A0A0S4T1L5;A0A090KM89;A0A090KMB5;A0A090KM82;A0A090KKF6;A0A090KMD4;A0A090MEW2;A0A076FQ79;S6AP35;A0A060VG30;A0A090KF00;A0A090KEZ4;A0A060VHD5;A0A090KFY5;A0A090KFV0;A0A090KF14;A0A078MYS4;A0A090KF09;A0A090KKD3;A0A060VD21;A0A060VCV3;A0A0S4T4N4;A0A0S4T3P7;A0A0U5QLT5;A0A140DJD0;A0A140EXM1;A0A142J2B0;A0A0U5Q0D3;A0A0U5Q0E7;A0A0S4T4M2;A0A0S4T3Y6;A0A0S4T3M3;A0A0S4T3N7;A0A0S4T3Q4;A0A0U5Q0W6;A0A0S4T3U7;A0A0S4T3W5;A0A0S4T3I7;A0A0S4T400;A0A0S4T432;A0A0S4T452;A0A0S4T476;A0A0S4T4K2;A0A0S4T4M1;A0A0S4T3Y5;A0A1W1RN26;A0A2H4RKA7;A0A2K4X4F2;A0A223PYA3;A0A0B7NS21;A0A0B7NX46;A0A0B7NXX4;A0A0B7NX31;A0A098F818;A0A0B7NXT5;A0A0B7NXS7;A0A0B7NXT1;A0A0B7NY70;A0A0A8R5V5;A0A0B6VWU6;A0A0B7NS05;A0A0B7NNJ3;A0A0B7NNJ6;A0A090MEZ8;A0A286MC70;A0A0B7NNK4;A0A0B7NRY9;A0A0A1IX96;A0A0B7NNL2;A0A0B7NNN9;A0A0B7NRY4;A0A1D3KYM9;A0A0B7NY75;A0A140T930;A0A3S6RFG5;A0A0G2JPD3;Q2UVJ3;A2BF26;A0A140T9B3;A4H284;A0A140T9J9;A0A140T9X5;A0A140T913;A0A0G2JH50;Q6R743;A0A140T912;A0A140T8Y4;A0A6B7IKJ6;A0A0B7NX39;A0A0G2JIF0;A0A140T962;A0A0B7NY81;A0A1C3PI06;A0A1C3PI20;A0A1C3PHX2;A0A286MC81;A0A286MC78;A0A286MC75;A0A286MC74;A0A286MC72;A0A291HVI5;A0A286MC71;A0A1W1B5V1;A0A191XZN8;A0A1C3PHU4;A0A1C3PHX0;A0A1C3PHW1;A0A1C3PHW9;A0A1W1B630;A0A291NGI9;A0A2D1CHF0;A0A1Z2RTN3;A0A2H4RN76;A0A2H4RN94;A0A2I6SQU8;A0A286RSS5;A0A1W1B621;A0A286MC83;A0A1C3PHV7;A0A1C3PI74;A0A1C3PHV1;A0A1C3PIA1;A0A0S4T1H9;A0A1C3PI04;A0A1G4HPY5;A0A1V1IFP6;A0A1V1IFQ2;A0A1D0BSS2;A0A1W1B5H4;A0A1W1B5N4;A0A1C3PHT0;A0A1C3PHU7;A0A1W1B5T1;A0A1C3PHU3;A0A1C3PHZ3;A0A1C3PHT8;A0A1C3PHT2;A0A1C3PHR5;A0A286MC85;A0A1C3PHN2;A0A1B1FC03;A0A1C3PHX8;A0A1C3PHZ6;A0A090KF65;A0A6B7HGE8;Q7YQB1;A0A5H2UUG9;A0A678ZPS2;A0A678ZK82;A0A649ZUF6;A0A678ZWP5;A0A678ZK40;A0A678ZI36;A0A678ZI39;A0A678ZIA5;A0A678ZIB8;A0A678ZIE4;A0A678ZJV6;A0A678ZI12;A0A678ZWM4;A0A678ZIF5;A0A5P8NF88;A0A678ZIM5;A0A678ZIN7;A0A678ZIQ6;A0A678ZJG8;A0A678ZJS6;A0A678ZIJ6;A0A678ZII3;A0A678ZIJ1;A0A678ZXS0;A0A678ZXP6;A0A678ZXL9;A0A678ZQU9;A0A5H2UJH2;A0A5H2UU47;A0A678ZWF6;A0A5H2UV22;A0A5H2UVT5;A0A678ZWC3;A0A678ZWA2;A0A678ZR52;A0A678ZQZ9;A0A678ZQV7;A0A5H2UVP0;A0A678ZIL8;A0A678ZQI8;A0A5Q2WW29;A0A678ZXX5;A0A5H2UUZ0;A0A5H2UZF6;A0A5H2UZE4;A0A5H2UZA9;A0A678ZHS0;C0LNY0;A0A678ZWH0;A0A6C0WYP7;A9X165;B1PWE4;O78179;A0A8E4J399;A7UM82;A0A8E4J380;A0A896SZ68;A0A896SZ41;A0A858LNM4;A0A858LJG9;C9E8V9;A0A858LHI7;A0A896SZ92;Q0PHP6;A0A858LK87;Q1M2U3;Q29987;Q52QV2;Q52QV3;Q53X46;Q546I6;K7DWB0;D3XQC3;Q5RIP0;Q6IUU7;A0A8E4J5S7;A0A858LGJ1;B6ZBY4;A0A8F5IUP7;B8YJM6;A0A5H2UJ13;A0A6C0TFP7;C1K0X4;A0A2X0REJ0;A0A858LHE7;A0A858LH41;A0A858LGR6;A0A8F4WFP9;A0A8F4WI18;C5IYE7;C9E8W0;C5IYE6;C4PKH3;C3VIR6;C1KC12;C1K0Y5;C1K0Y1;A0A858LHF4;A0A858LHG5;A0A858LHH9;D3K0R1;A0A5H2UV17;A0A5Q2WVN9;A0A0B7NX34;A0A5H2UU78;A0A6B7FV89;A0A6B7FU76;A0A679A1R0;A0A6B7IJF8;A0A6B7FU59;A0A6B7FU17;A0A6B7FU06;A0A6B7FTX9;A0A6B7FTQ8;A0A6B7FUM4;A0A6B7IJK9;A0A6C0TDF0;A0A6B9VPP5;A0A6B9VRB5;A0A6B9VRE1;A0A6B9VRG8;A0A6B9VRR1;A0A6B7IJQ6;A0A6B7FUV1;A0A6B9VUL7;A0A6C0SEE2;A0A6C0SEE3;A0A6C0SGF2;A0A6B7FVD7;A0A6B7FW40;A0A6B7FWV0;A0A6B7HGG4;A0A1C3PHR3;A0A6B7HGD1;A0A6B7HGG2;A0A6B7HGM7;A0A6B7HGH1;A0A6B7HGH9;A0A6B7HGI6;A0A6B7HGJ0;A0A6B7HGK0;A0A6B7HGK6;A0A6B7HHP9;A0A6B7FWV2;A0A2K4X4E0;A0A6B7IHE1;A0A6B7IIW9;A0A6B7HGE0;A0A6B7HGD3;A0A6B7HGK7;A0A6B7HGC3;A0A679A236;A0A6B7FTL8;A0A6B7HFM5;A0A6C0SH40;A0A6C0SHF6;A0A6B9VUP1;A0A5J6CWB6;A0A5H2UZU6;A0A6B9MTA2;A0A6B7KXK6;A0A5H2V214;A0A5H2V219;A0A5H2V290;A0A5H2V2J9;A0A5H2V2L5;A0A5H2V2L8;A0A5H2UZV2;A0A5J6CWU9;A0A5H2UZM2;A0A5K8ANZ5;A0A5H2UZJ6;A0A5H2UZH5;A0A5H2UZH0;A0A5H2UJ39;A0A5H2UJ80;A0A678ZWC5;A0A5H2UZL3;A0A5H2UJD9;A0A5H2UU63;A0A5H2UZU1;A0A678ZXT1;A0A6C0SEB9;A0A6B9MMA0;C1K0X3;A0A6B9MXL2;A0A6B9MSG3;A0A6B9MSE7;A0A6B7IJS1;A0A6B7IJX3;A0A6B7IJZ6;A0A6B7IKM2;A0A6B7KQA8;A0A6B9HSI9;A0A6B7IJN4;A0A678ZY76;A0A6B7KVF0;A0A6B7L1N0;A0A6B7L1N6;A0A6B9HQ55;A0A6B9HQW0;A0A6B7KQB7;A0A6B9MYK3;A0A6B9MQ82;A0A5H2UZW8;A0A6C0TE54;A0A7R9KAW1;A0A7R9KAS3;A0A7R9KAN3;A0A2I6J4B6;A0A2K4N8G0;A0A4P2ST85;A0A4P2ST93;A0A4P2SRA6;A0A0S4XR15;A0A4P2SS87;A0A346HFZ8;A0A0S4XR13;A0A4P2SSC0;A0A4P2SSF7;A0A2K4Y3L4;A0A0S4XR00;A0A346HFZ3;A0A4P2SSB9;A0A4P2ST08;A0A2P9FIS2;A0A0U2M4K4;A0A455JVD8;A0A455JU27;A0A0S4XRJ4;A0A4P2ST19;A0A4P2ST79;A0A4P2SS23;A0A4P2SR84;A0A4P2SR98;A0A0S4XR47;A0A4P2STA0;A0A2I6J489;A0A2I6J4A5;A0A2I6J4A7;A0A2I6J4B5;A0A0S4XQZ1;A0A2I6J4C1;A0A4P2SS62;A0A2I6J4C3;A0A2I6J4C7;A0A2I6J4D3;A0A2I6J4E1;A0A4P2SRQ3;A0A2I6J4E2;A0A0S4XRX2;A0A2I6J4D2;A0A0S4XR22;A0A0S4XRU8;A0A0S4XR27;A0A0S4XR32;A0A0S4XR34;A0A4P2SRZ1;A0A4P2SS81;A0A0S4XRK4;A0A3G8GE18;A0A346HFZ9;A0A0S4XRE1;A0A0S4XRH3;A0A2U3QLI8;A0A2U3QLJ8;A0A0S4XRG5;A0A0S4XRL9;A0A2U8RNM3;A0A346A6A5;A0A3S6REZ0;A0A2U3QLI7;A0A0S4XRJ0;A0A0S4XRF8;A0A2U3QLL5;A0A2Z6DS77;A0A0S4XRH4;A0A2Z4BYD7;A0A2Z2GXL0;A0A2U9AEP6;A0A2U3QLG3;A0A0S4XRI0;A0A2U3QLG5;A0A0S4XRG1;A0A2Z4BY63;A0A2U3QLM8;A0A2U3QLJ1;A0A346HG00;A0A3G6II41;A0A375B7P5;A0A385DNY9;A0A385H959;A0A346HFZ6;A0A346HFZ4;A0A0S4XRD5;A0A3G2LWP4;A0A3G4R8Q6;A0A3G5BD36;A0A3G5BD37;A0A2U3QLG2;A0A2U3QLJ3;A0A2U3QLF5;A0A3G6V5V8;A0A2I6J4E5;A0A2U3QLF8;A0A3S6REY6;A0A0S4XRJ3;A0A330NHT5;A0A2U3QLJ6;A0A2S1B6W6;A0A3Q8U714;A0A2I6J488;A0A4P2STM0;A0A2P9FIU0;A0A2K4N817;A0A5A4LIR0;A0A7U3K2G9;A0A090KFS3;A0A0F6TL23;A0A060CZ20;A0A060VHE9;A0A0D6K976;A0A060CYB7;A0A0H3W548;A0A3S6RF55;A0A455JVV0;A0A2P9FIE9;A0A2P9FIF5;A0A4D6NZ34;A0A4D6NYZ2;A0A2P9FIF7;A0A2P9FIF8;A0A2P9FIG6;A0A4P2SR04;A0A1W1RN11;A0A4P2SQM7;A0A090KEX7;A0A2L0V4I2;A0A7U3K2H8;E3Q1L4;A0A8A0T5S1;A0A858LH86;A0A858LHN4;A0A8E4J3T7;A0A8E4J3S0;A0A8E4J3J5;A0A8E4J3I4;B7VU66;A0A858LH79;A0A897ZLK4;A0A896SZ85;A0A896SZ62;A0A890UMV2;A0A890C9Q9;A0A872YP61;A0A8A6C9V2;A0A858LNQ7;A0A858LJS6;A0A858LHP5;A0A5A4LIC5;A0A6B7FUS3;A0A5A4LIT7;A0A2P9FIE8;A0A2P9FID8;A0A2P0W8U1;A0A4D6NWB3;A0A2P9FII0;A0A455JWW7;A0A455JWY1;A0A455JWY2;A0A2P9FIL8;A0A0S4XRV1;A0A2P9FIK5;A0A4P2SR64;A0A493QP47;A0A493QP49;A0A4D6NWI6;A0A2P9FIL6;A0A0S4XR59;A0A455JWX6;A0A493QP46;A0A2K9UYT3;A0A4P2STB9;A0A2K4N859;A0A2K4N833;A0A0S4XQZ8;A0A0S4XRU9;A0A4P2SR11;A0A455JVV7;A0A0S4XR60;A0A2P0W8C0;A0A4P2SQS1;A0A4P2SQZ5;A0A2P0W8C1;A0A4P2SQY8;A0A4P2SQY0;A0A2P9FIG3;A0A2P0W8C7;A0A2P0W8E3;A0A4P2SQX9;A0A2P0W8E8;A0A4P2SQW0;A0A2P9FIH4;A0A482CYH7;A0A2P0W8D2;A0A2P9FIH8;A0A2P9FII2;A0A455JVP7;A0A2P9FIQ0;A0A2P9FIP2;A0A2P9FIN9;A0A455JVQ1;A0A2P9FIN4;A0A2P9FIM2;A0A3S6RFJ1;A0A3S6RHN6;A0A7R9KAL2;A0A0S4XQR3;A0A1W1B6Q0;A0A1W1B6K1;A0A1W1B6F7;A0A0S4XQS9;A0A191XZB8;A0A191XZC7;A0A1B1LKE3;A0A1C3PH81;A0A1C3PHA4;A0A0S4XQT7;A0A1C3PHB8;A0A1C3PHD2;A0A1C3PHF3;A0A0S4XQV1;A0A4P8NGW8;A0A1D3KYP9;A0A1D8MAM8;A0A1D8MAN2;A0A1G4HPV4;A0A1G4HPW8;A0A1G4HQ05;A0A1C3PHQ1;A0A0U5PUR8;A0A1W1RMX8;A0A1W1RMZ0;A0A1W1B5W5;A0A1S7SKF3;A0A1W1B5S1;A0A1S6Q4B8;A0A1W1B5R0;A0A1W1B5Q4;A0A1W1B5K0;A0A159AYQ3;A0A1W1B5J3;A0A1W1B5B7;A0A1V1IFP3;A0A1T4J2C1;A0A1S7SKC8;A0A1S5UYW8;A0A1W1B5Y6;A0A5A4LIB2;A0A1W1B640;A0A5A4LIA6;A0A142J256;A0A142J252;A0A142J247;A0A140T9I0;A0A1S5UX46;A0A1W1B5L8;A0A2U3QLJ5;A0A0U5PUN7;A0A2H4ZAS5;A0A291NGJ9;A0A286LDA1;A0A2H4ZAU0;A0A286LDA8;A0A2H4WPY6;A0A2H4WPX7;A0A223PYC5;A0A2H4UK28;A0A0U5PU33;A0A2H4UK27;A0A2H4WQ10;A0A286LDA0;A0A2H4WQ12;A0A2H4WQ02;A0A286RNI0;A0A286LDD2;A0A286LDC3;A0A2H4WPW3;A0A2H4WQ03;A0A286LD94;A0A286MC52;A0A286MC51;A0A346FLH5;A0A2H4ZAR8;A0A0U5PU47;A0A2H4ZAS6;A0A286LDB4;A0A0S4XQY9;A0A286LDC1;A0A2H4ZAT0;A0A2H4ZAT3;A0A140HM97;A0A286LDB8;A0A286LDC0;A0A286LDB9;A0A0S4XQQ0;A0A286LDB6;A0A286LDB3;A0A0U5KK83;A0A2H4ZAT9;A0A4P2STQ1;A0A286LDB2;A0A286LDA9;A0A2H4WPY8;A0A2H4WPY9;A0A2H4WPZ0;A0A2H4WPZ9;A0A4P2STM8;A0A286LDC2;A0A1W1B5X9;A0A1D3KYM8;A0A3S6RI42;A0A0Y0D599;A0A3S6RF49;A0A3S6RF51;A0A3S6RFG8;A0A3S6RF12;A0A3S6RF58;A0A3S6RF64;A0A3S6RF66;A0A3S6RFF2;A0A3S6RFE6;A0A3S6RFD9;A0A2S1B6V4;A0A3S6RFC8;A0A3S6RFC3;A0A3S6RFC1;A0A0U5Q304;A0A3S6RFB8;A0A0S4XRU2;A0A3S6RFB0;A0A3S6RF92;A0A3S6RF90;A0A3S6RF68;A0A2S0SYY2;A0A455JU33;A0A3S6RF45;A0A0S4XRM1;A0A3S6RF32;A0A0S4XRB8;A0A3S6RI73;A0A3S6RI93;A0A3S6RIA4;A0A2P9FIU2;A0A0S4XRC2;A0A2S0SYT6;A0A1W1RN09;A0A2S0SYR3;A0A410R970;A0A2P9FIU9;A0A3S6RIC3;A0A3S6RFH3;A0A3S8TKM8;A0A3S6RFJ7;A0A411D3E2;A0A455JU01;A0A2P9FIT0;A0A455JU13;A0A410P821;A0A3S6RFI7;A0A2P9FIU1;A0A411G9X3;A0A2H4ZAV3;A0A583ZB56;A0A0U5Q1N6;A0A4Y5ULX4;A0A0U5Q1J2;A0A4P9D212;A0A583ZB85;A0A4Y5RU99;A0A2H4ZAV0;A0A4Y7LIR2;A0A4V0NP58;A0A4V0NP60;A0A513WWM0;A0A4V0NPD9;A0A4Y6GRV6;A0A0U5Q0C2;A0A0X9WDS9;A0A4V0NP54;A0A4Y7LIR8;A0A4Y7LKT8;A0A0U5Q1N1;A0A4Y7LL79;A0A1Z2RTK1;A0A4Y7LMW4;A0A4Y7LIQ9;A0A5A4LHH8;A0A4P8VMX1;A0A1Z2RTJ5;A0A583ZB23;A0A2H4ZAV4;A0A583ZB22;A0A583ZB15;A0A0S4XQU0;A0A0S4XRU7;A0A583ZAW5;A0A0U5Q1R3;A0A1Z1VXF1;A0A1Z1VXF8;A0A583ZAW0;A0A4V0NP53;A0A583ZAW2;A0A1Z2RTJ0;A0A0U5QLK5;A0A5A4LGU7;A0A1Y6MTK5;A0A5A4LHC3;A0A0U5QLN1;A0A0U5QLP3;A0A5A4LHE4;A0A0U5QLQ5;A0A4P9D486;A0A4V0NP48;A0A858LGS5;A0A858LNS7;A0A858B940;A0A678ZVR3;A0A5H2UV55;A0A5H2UUZ3;A0A6B9MSD5;A0A6B9MYM4;A0A6B7HGP1;A0A6B9VR87;A0A5H2UV60;A0A5H2UUS6;A0A5H2UUI5;A0A5H2UU71;A0A6B9VRD8;A0A6B7IFP5;A0A6B7IFJ8;A0A6B7HGM1;A0A6B7HGL5;A0A6B7HGF0;A0A6B7FWC9;A0A6B7FWH5;A0A6B7FWQ8;A0A6B7FWR8;A0A6B7IFX5;A0A6B7HFQ5;A0A6B7HGF8;A0A6B9MQ69;A0A6B9MYM6;A0A5H2V191;A0A6B9HT24;A0A678ZGE8;A0A678ZGP6;A0A6B7FVM7;A0A5H2UU48;A0A6B9MMC8;A0A6B7IG45;A0A649XVV9;A0A6B9MM61;A0A5H2UYR5;A0A6B9KNQ2;A0A5H2UYP9;Q9GJ44;A0A6B9HR62;A0A6B9HSK5;A0A6B9HS71;A0A6B9HQQ6;A0A5H2UYT1;A0A6B7KXF2;A0A6B7KV28;A0A6B9HSE7;A0A6B9MM79;A0A6B7FVK2;A0A6B7HGN5;A0A6B7HGG1;A0A6B7HGH3;A0A7R9KCZ6;W1I6E7;U6A3P1;V6A6U0;S6FW97;S6AU97;Q9TQB6;Q9TQ73;Q9TQ65;A0A678ZWD5;X5M4Z2;A0A678ZLB0;A0A060VG62;A0A125RL88;A0A1D3TZM5;A0A1V0EFG1;A0A1V0EFG5;A0A1V0EFI5;A0A1X9ZEH3;A0A2K9VPU0;G9FXD6;X5M4Y6;A0A6B7HGI3;A0A6B7IER3;A0A6B7HGI4;A0A6B7HG37;A0A6B9MT85;A0A6B7HHS8;A0A6B7HHU1;A0A5H2UTD1;A0A6B7IEV1;A0A5H2UYY4;A0A6B7IET9;A0A5H2UZ01;A0A6B7IEQ2;A0A5H2UYU9;A0A6B7IEN9;A0A5H2UZ10;A0A6B7ICS9;A0A5H2V0W0;A0A5H2V146;A0A6B7IC09;A0A678ZWH2;A0A6B7ICY6;A0A5H2UU57;Q9MY52;A0A7R9KCT7;A0A678ZVS0;A0A858B709;A0A678ZGD9;A0A6V6XZ44;A0A7R9KCR9;A0A5H2UTH7;A0A678ZZB7;A0A7D5A999;A0A7D5JR52;A0A7D5VT54;A0A6S7XTJ0;A0A7L7TXB5;A0A6B7IBY9;A0A678ZM51;A0A7R9KAJ3;A0A678ZZB3;A0A5J6E368;A0A678ZIB1;A0A678ZI85;A0A678ZLD7;A0A678ZII8;A0A678ZLI0;A0A678ZH11;A0A7L4X6Y9;A0A678ZIF2;A0A678ZWV6;A0A5A4LK66;A0A5A4M342;A0A6S7XV52;A0A7R9KB44;A0A7R9KAJ5;A0A7R9KAJ9;A0A6C2E5D2;A0A7L4X6X5;A0A6M8PX82;A0A6M8PU90;A0A6M8PTY5;A0A6M8PRU7;A0A6M8DNE3;A0A6M6CEL9;A0A6M4RV88;A0A6S7XU32;A0A6M4A9L9;A0A6M3YYA1;A0A6M3YCA4;A0A6G7S6K8;A0A5H2UF04;A0A7D6ILG0;A0A6M4A9V8;A0A6M8PX95;A0A5H2UEQ8;A0A5H2UEN5;A0A678ZLK8;A0A678ZWS8;A0A678ZI69;A0A678ZGG8;A0A678ZGU7;A0A678ZGU9;A0A5Q2WTW9;A0A678ZGW7;A0A678ZGF8;A0A678ZGI5;A0A678ZVK8;A0A678ZLW3;A0A678ZM30;A0A678ZGY9;A0A6B7FT37;A0A678ZGY5;A0A678ZVQ8;A0A649WAY7;A0A6B7FVL2;A0A678ZWQ9;A0A649ZUS9;A0A678ZWN3;A0A678ZWJ0;A0A678ZVN7;A0A5H2UYQ6;A0A678ZLV0;A0A678ZLX8;A0A678ZWR6;A0A5J6WG98;A0A6B7FT82;A0A678ZIP2;A0A678ZZ45;A0A6B7FUX3;A0A6B7FUQ0;A0A6B7FUY5;A0A6B7FTC9;A0A678ZGM9;A0A678ZZC7;A0A678ZZE4;A0A678ZVL5;A0A5H2UYG2;A0A6B7FT88;A0A6B7FTE4;A0A678ZKW9;A0A6B7FTG4;A0A6B7FTS4;A0A6B7FUP9;A0A678ZGL8;A0A678ZVK6;A0A678ZMM0;A0A678ZGQ5;A0A2K9VPU4;A0A2K9VPU5;A0A2K9VPV0;A0A2K9VPV7;A0A7R9KD51;A0A7R9KD16;A0A7R9PTK5;A0A7U3K2D1;A0A7S5GRP8;A0A7R9PSN9;A0A7U3L8Q4;A0A7T8EHY3;A0A7S5L7H4;A0A7T4WS02;A0A7T4WRR9;A0A7T3RIT2;A0A7T0YLJ8;A0A7S6ZR56;A0A7S5L7U4;A0A7U3L8Q5;A0A7T7GVT5;A0A7S5L7D3;A0A7S5GSK5;A0A7S5GRU5;A0A7S5GRS1;A0A7S5GRR5;A0A7U3L8Q1;A0A7R9KD61;A0A7T8G1R2;A0A7S5GRS0;A0A7U3L7P5;A0A7U3K2D4;A0A7U3L8Q0;A0A7U3K2L2;A0A7U3K2N5;A0A7U3K2N6;A0A7U3K2D7;A0A7U3L7L3;A0A7U3L7M0;A0A7U3L7N2;A0A7U3L7N5;A0A7U3L8E3;A0A7R9PSP4;A0A7U3L8E6;A0A7U3L7L7;A0A7R9PTA4;A0A7R9PSZ7;A0A7R9PSX6;A0A7R9PSX2;A0A7R9PSW1;A0A7R9PSU2;A0A7R9PSQ9;A0A7R9PSP9;A0A7S5L7S5;A0A7R9PSN7;C5IWX5;A0A858LGR5;D7GN80;D7GN81;D7GNM8;D9J2K2;D9UB07;D7GM33;C5IWY6;A0A8E4NGH1;A0A8E4J404;A0A8E4J3W7;A0A858B9H8;D5H3V5;A0A858B9A0;A0A858B990;A0A858B974;A0A7U3VIC4;A0A7U3NNH8;A0A858B8X4;A0A858B8W9;A0A858B875;A0A858B850;A0A858B812;D7GM34;A0A8G1LTH7;A0A858B934;B1PKZ1;C5IWX6;A0A8F2T8C3;A0A8F2T9F6;A0A8F7CGG9;A0A8G1GJM1;A0A8G1LSM9;A0N0E2;C5IWY8;A5A4G3;B0UXQ0;B1PKZ2;D5H3T6;B2LT55;B5TZV4;A0A8F2PSD2;C5IWX9;C5IWY7;C5IWY9;C5IWZ0;D0V481;D5H3T1;D5H3T4;A0A7U3K2B7;A0A7U3L8H8;A0A7U3L8I2;Q52YL7;Q2MJJ5;Q7YQ33;Q7YP31;Q52QV5;Q4VYE6;Q6EXB0;Q5SPM2;Q5RJ27;Q5MAG5;Q53Z42;Q704F3;Q8HWQ9;Q3LRR7;Q2MJJ6;Q2LC95;A0A2K9VPW3;A0A2P1CQH4;A0A2S1ZAK4;E3WHS6;Q3LRR6;I4EPA6;I2GAE0;Q1ELT0;P79603;I6QSJ6;A0A2K9VPV8;A0A0A1IX94;A0A0M7BFM3;A0A5A4LJC8;A0A090MF30;I2HA75;I3ZN76;I3ZN78;I3ZN79;I3ZN80;A0A218MK88;E9BVB6;I6R4N3;I7LL24;M1RL68;Q8HWQ8;Q8MGT5;A0A2K9VPW2;I6YAY1;G4Y0P1;G9MCL5;F6IQL9;A0A7U3L8K0;A0A7U3K2N2;E5FQ45;D9UB09;A0A7U3K2J6;A0A7U3K2J5;A0A7U3K2J3;A0A5H2UI80;A0A2L0V4I5;A0A7U3K2I1;A0A7U3L8M2;A0A7U3L8N1;A0A7U3K2K8;E5FQ49;A0A7U3K2D5;A0A7U3K2K5;A0A7U3K2D9;A0A7R9PTH7;A0A7U3K2E5;A0A7U3K2E7;A0A7U3K2F4;A0A7U3K2F7;A0A7U3K2F9;A0A7U3K2G1;A0A7R9KCU6;A0A5Q0TX06;A6Q0R4;Q8WUX3;B1GYE6;A0A6B7FT97;X5JRV1;Q96FQ5;A0A090KME2;A0A6F8VIG4;A0A6M6CJC3;A0A858B824;A0A866W2K2;A6Q0R5;B0BKZ5;A0A6C0SEC8;A0A649ZV41;A0A4P8DKR2;A0A482PB03;A0A346FLH7;A0A345FAC5;A0A343J2L6;A6YS07;B2G4X0;A0A140DD52;C8CBY7;E0WN92;A0A376A957;E0WN40;E0WN58;E0WN49;E0WN25;A0A3T1BAH1;E0WMY8;E0WMP8;E0WMN0;S4VAM7;E1CJE3;D7GNM6;D6CIE7;W8YM39;X2J3V4;X5CHJ2;X5JBB1;A0A060GTH7;A0A089N0V0;W6SQV0;A0A2Z5ZN17;E1CJE2;E1CJE5;U5XMI1;A0A6F8VIA5;Q546Q4;C6H0N1;B7VCC4;C7C5U0;B5AH69;A0A8F4G6N8;A0A7D5DUP5;A0A6G8QHW2;C7EY82;A0A6C0TJ98;E1Y6M5;A0A583ZC39;A0A515HFK4;A0A514YDT9;A0A514YDS2;A0A514YDP5;C7C6F5;A0A6C0TJ04;M4R8T1;E0WMM8;B6VPZ4;A0A3Q9WYH3;E0WMT8;Q45NE2;A0A0G3EM65;A0A2Z6ICR0;A0A180K1I8;A0A167RMR1;L7XEN4;A0A143Y4S4;A0A142J406;A0A0S1S0E7;A0A0N9QYG1;A0A0N9MPD2;A0A0G3ENZ7;M1KQ42;A0A1W7INZ2;A0A292G0K0;A0A292FP66;A0A1C9ZYR6;E1Y6P5;D1J6P9;V5L197;D3HUM0;W8E988;W6SNC0;A0A2Z4LG72;A0A0A0U836;W0T236;W0FF27;V9W2L5;V9VYY9;V5NE49;W8SKC0;A0A292G1H1;W1IB93;A0A0A7RYM9;A0A0F7NJ09;A0A0F7YY45;A0A2Z5ZMV3;A0A2Z5XAE7;A0A2Z5XAE0;U6EV21;A0A060H0F5;Q0VJ91;Q45NE1;A0A078BBY8;S6CRG7;Q6I6G7;Q6L625;Q6L676;Q6L6P9;Q6F3H0;Q9MW39;T1WQ06;T1WGK5;R9RI97;T1RT90;S6BEP5;Q6F3I9;S6B0Q5;Q60I39;T2MKA2;S5NIY1;S5CGR3;S0F3H7;S0F3A9;S0F0M8;R9WXA9;R9WAS6;Q6I688;Q68Y63;M4RBI3;A0A078BSN2;A0A090KI70;A0A076V5S4;Q75NY8;Q75WB6;Q8MHP7;Q8MHP8;Q95IZ1;T2ET92;Q75NJ3;Q70I55;Q6L6T0;Q6L6R5;Q6L6Q3;M4THY5;T2MJ84;R4RUH0;R4NLT9;R4L6P2;R4L0K0;S5CRT6;M4RBI8;Q3HNF7;Q45XP5;Q0P6N9;Q0GE97;N1NT54;N1NSY8;M4QNU4;M4QUR9;Q4W6C5;Q5R1M0;Q4W6C3;Q5EPE9;C7C5G9;U6ERM7;U4QB70;M4NJR5;Q4LAU0;Q4ZG94;Q0PMJ8;Q19K87;Q1W4D6;Q308P3;C6KF33;Q546F7;M4VJS4;M4VSA0;T1WE98;Q5NTA3;N0GWB7;N0AAA5;M9TIH3;M9TGE6;M5AUI8;M9R0Q6;M5EF02;M5A7E7;M4VMS8;Q540M3;M4VMS3;M4VLP5;Q5W9R8;R9RVK4;D9UC06;A0A654E5D0;A0A4P8PMR2;J7G6V4;I7HAR2;I7H3R2;K4NP16;H9BWE6;F8WS75;K4ULX4;J7RE54;F8WSJ2;F8WSC7;J7H9Z9;J7RT43;I2GUK2;I7GY09;I6QLC3;I7GSC3;I7CT52;I2G8B5;I2GUJ9;I2GUK0;I3TBB5;I7D6N7;I6Z8E6;K7YHC3;K7X0G5;I1VXL9;K4TZQ2;I1VXM3;K4NRQ4;K0P0J0;J7SAX1;G4VU13;G4XZE8;G8FQ52;H2D5G1;G9FTK1;G1UK07;E1Y7F9;G0ZMZ0;H9EHK6;G9G815;G9IHU5;H2AM00;H2AM05;H6SSQ1;H6UVX7;H9BB16;H9BE43;G0M6G2;G9G814;G8GBV1;G8GBV0;E3Q0Y4;L7XDT5;L7XDE9;D4P942;L7WQ81;I7B0X0;I6QTM5;I6R1A7;I6RB65;I6S4P2;I6Y0B1;I7ARY8;L0N4J2;I7C6A9;M1JPA6;I6M4H6;I4EPY0;I3VB22;I3VB20;F8WSC6;L7WM55;F5CR33;A0A078BRA4;A0A076VF41;I2GAD7;Q6IV49;A0A1B1LTS1;Q6R740;Q704T5;D9UAZ6;A0A0H3W5K9;A0A0H4LY29;A1KWT0;W6JNQ2;A0A4P8PBH5;A0A4Y6GU94;A0A1D3TZM4;A0A7I8AUN5;A0JKD2;P79497;A2Q116;Q6IUZ5;A0A7I8AVN6;Q6ZUK5;F0VRV9;A0A2Z4LZ16;E3Q0Q8;X4YZB9;A0A2R4RN24;A0A1L7NQ70;B6E278;Q06FC4;F0VRV7;C1K9J3;A7LKN0;Q8MHN8;A0A290G4C7;S4VCD5;A7Y1U3;A0A180K1J1;D2KMV9;D9UB28;C7E2U5;Q19BJ8;A0A076V371;Q29866;D5H3T3;O19657;A0A140T955;D5H3V7;Q1XDY2;D6CIC3;M1XGM5;A0A411E079;H9BNV4;H6SHQ5;A6YT90;A0A140T941;A0A1W2PRZ0;A0A1W2PR61;A0A140T975;D5H3U0;A0A583ZBW9;A0A3G6V6Y8;A0A2R2WVJ3;A0A345F7A7;A2V815;A0A0U5L7I7;A0A7G3KIN2;Q6ZYB9;D5H3W0;K0P0H0;A0A140T933;A0A140T8W8;O19655;A0A583ZC02;A0A583ZC03;A0A583ZC04;A0A6F8VGI6;A7M780;A7WPI9;A0A0N9HR25;A8ILL3;B2CZA7;B2CY74;A0A514YDQ3;A0A0N7G7C7;A0A0K2GUM7;A0A583ZAX1;A0A455WHI8;A0A0N9QWF4;A0A0N7FRR2;A0A583ZAV3;A0A6B9CQX0;A0A6C0TKG2;A0A125RL89;A0A455WJG6;A0A3G9HRF1;A0A4Y1YQ41;A5A4L6;A0A4Y5UYA0;A0A0S2C596;A0A0P0GBC9;A0A1C9ZV22;A0A1G4NQV4;A0A167RMM9;A0A1C3L6B7;A0A1C3L6C3;A0A1C9ZQS3;A0A1C9ZWK6;B1B727;A0A0F7ILB5;A0A583ZB06;A0A0G3EM61;A0A0A7EBW5;A0A060GVB3;A0A061A7U0;A0A061CVW2;A0A167RMW8;A0A167RN49;A0A1B1UZB7;A0A0K2GUM3;V5NQE9;A0A1X9PY90;A4UUL3;A0A1S6GKZ1;B1Q4W3;A0A1M4NF67;A0A1Z1W2A7;A4URG9;B0LV24;A0A1A8H5D0;A0A192ZH27;B1Q4R7;A6H591;C0L0E6;B8Y4R9;A0A2H5CP65;A0A0H5BJS0;A6H592;A6H346;A0A343J4V5;A0A2D1WBC6;A0A343J4V9;A0A3G1VFM0;B1B6Q5;A0A3G8GE06;A0A3G8GE28;A0A0H3W567;D7RTU8;A0A0G3VSP7;P79556;L8BTZ4;A6N9E1;A0A0G3ENZ2;A7MAP2;A0A2Z4LI59;A0A2Z5ZNJ5;A0A2H4V664;A0A7T6ANY8;A0A7T6AP32;A0A2I6ZCW1;A0A7S8WJT4;A0A6G6D3S7;A0A0N9MX94;A0A0N9MXA6;A0A0N9Q8N5;A0A583ZB91;A0A286R104;A0A286R647;A0A343J4W0;A0A3G9HKA4;A0A3G9H9M4;A0A3G8GE33;A0A223PK90;A0A2R3U9W8;A0A2R4KZT8;A0A2Z4LG68;A0PBY4;A0A6G6D3T3;A4URF1;A2VBZ8;B1B6Q4;D1MZT9;D3YLL2;D5GU49;D2KZ54;D2KZ56;D1MZT6;C5J4N4;C6H0N7;B6ECH4;D2KZ35;D2KZ34;D2KZ33;D2KZ32;D2KZ30;D2KZ29;D2KZ28;D2KZ31;B3V990;D2U6Y7;D2KZ27;D3YFD3;B5A516;E3Q1V2;D1H0Y9;D1J6X4;C6H0P2;D1H0T8;C8ZLL1;C6L835;C6H0P0;C6H0N9;B2DFV9;E0WMV7;B7XGC2;E0WN85;E0WN83;E1Y7D1;E2GD50;E2GHW7;B6ECH5;D2KZ36;B2DFV8;D5H3I6;B3GUH8;B2G3P7;B3WFC9;B6VA00;D3YLL1;B3WFC8;B7XH57;B9VJL8;B9W1S7;F2XI36;F4ZZU3;Q5UGI4;A0A1W2PS56;E3UM70;F6IB50;A0A1W2PP77;I0J9E2;F5BZ30;F5ATC5;E1XUP8;E3WH35;E3WH34;E5BBI6;A0A1W2PRX1;D1MZT8;C6H0P1;E9ABI2;F2XI29;F2X5P6;A0A2R8BPU9;E5FYM9;A0A4P8DJ79;E9RK91;E7BBA3;A0A583ZAV7;E0WN82;Q1G0L6;S5DLE2;Q2UV91;S5DLE7;S5DLH0;S5DHR6;S5DHQ1;S5DHP3;S5DHP0;M5ETC5;S5DLG6;R4RUJ2;S5DL83;S5DI47;G0WJF3;G4V595;S5DI37;S5DI24;S5DI19;S5DI14;G5CJS3;S5DHU0;G4V594;S5DLD6;S5DI56;R4S840;E3Q0Y2;Q2UV92;Q2UV93;Q5R1M1;R4RUI3;R4RWV9;S5DI53;R4S846;G4VTY3;R9RFL1;R9RIA8;R9UU99;Q09GE6;N1NT51;N1NRY1;G8G137;J7JQD3;S5DHS8;S5DHR9;S5DI40;U6EFV2;E0WMV2;S5DN96;S5I324;S5TLC0;S5DN86;S5DN61;E0WMV3;S5DN50;T2B9H9;T2MJ89;U3RD07;U5TRL0;S5DN56;U6BZR6;S5DN91;S5DTZ7;X5FFQ3;W0NQ35;V6CJI7;U6EUF0;S5DLH6;D5L6G2;E0WMN2;D7GLM1;D7GNM3;D9IDV1;D9UAX5;E0WMM9;S5DU33;S5DU27;S5DU24;H2ALZ9;I3TBB9;I6RAH1;I7A6W0;I7GSS2;I7GVS4;I7H542;I7HDU6;K4ULG4;H6SSQ4;H2ALZ7;I2GUK8;G9MCL4;G9G7Y5;H8XBU0;K8ESP8;I1V1X0;S5DU19;F5CR31;L7UZX8;S5DHT7;F1C8N6;E3Q1I1;M5DCF8;S5DI43;G0UDG4;E3Q0Y5;F4ZZU8;G0WJF2;F2XI59;E9ABX8;E9ABI4;E7BBA4;E3Q1I3;F4NC92;K4UNA5;S5DLJ6;S5DLI1;G4V596;S5DHS4;S5DLJ1;S5DNA5;S5DTD9;S5DTZ1;S5DTZ5;S5DU16;S5DN81;I2GUK5;G8ZKX2;H8XBT9;I6QNT6;G8GW80;B2G3G4;Q4JLV8;A0A076V767;Q9MYI2;A0A866W1K1;S4VFS7;E0Z0E2;A0A2S1ZAM4;D5H3W1;U5YJI3;A0A060VG17;B4DJI3;A0A583ZBW2;A0A060VG23;Q861F7;V5NRG5;O19677;A0A1W6C2M8;F6IQI8;F6IQI7;F6IQI6;F6IQM6;F6IQM7;F6IQM8;F6IQM9;F6IQN0;F6IQN1;F6IQJ0;F6IQH8;F6IQM2;F6IQH5;F6IQR8;F6IQR7;F6IQJ3;F6IQH6;F6IQM3;F6IQI9;F6IQJ1;F6IQR6;H2DH14;F6IQQ6;F6IQQ7;F6IQQ8;F6IQQ9;F6IQI2;F6IQR0;F6IQP7;F6IQR5;F6IQN4;F6IQH4;F6IQN2;F6IQI0;F6IQR1;Q861F6;A0A060VHE3;F6IQJ5;F6IQJ4;F6IQN3;F6IQM4;F6IQM5;F6IQH7;A0A411G9Y9;F6IQR3;Q9MYH8;F6IQJ2;A2BCQ5;A0A128E1E0;B7UE87;Q7YP23;F6IQH9;Q9GJP2;A9JPG2;U5YJR3;F6IR56;U5YKE3;U5YJP1;U5YJN4;A0A1Z2RP38;A0A1Z2RP15;U5YKC3;A0A125S9I1;F6IR58;U5YJR6;U5YMH5;F6IR53;F6IR54;U5YMK3;A0A2P1CQH6;U5YJJ1;U5YJM1;F6IR51;U5YKE0;E2FIL8;U5YMG9;F6IR48;F6IR47;U5YMN5;F6IR46;U5YMG4;A0A142J144;U5YKI0;A0A8F2EV94;F6IR57;F6IR55;U5YMF4;F6IR52;U5YKH4;A0A8F2J8E4;A0A060VCW9;A0A1G4HPX5;A0A060VCY9;A0A0D6K9D0;A0A060VCY8;A0A2U8T8Y7;A0A060VHJ3;A0A060VHG8;A0A060VHD9;A0A583ZAW4;X5MPH4;A0A060VCX0;W8YE50;Q8SNA8;A0A140T9Z6;A0A165EYK7;X5MNS5;A0A060VD05;A0A090MF36;X5MPH1;A4UTT5;X5MI18;A0A060VG36;A0A3T0TUN6;A0A1W2PPF8;A0A1Z2RP35;V5NQE5;A0A0M7BEQ1;F6IQI5;A0A1W2PPQ2;A0A140T937;X5MNS3;X5MBH5;A0A060VCU0;T2ETK5;A0A060VHF3;A0A060VG26;A0A060VCU4;A0A1W2PS39;F6IQN7;F6IQI1;F6IQP1;X5MBG6;V5NQC9;V5NQE0;A0A7T3RIQ2;A0A6C0NSP3;A0A6C0SH34;F6IQA7;A0A6B9V3B6;A0A3G6V3S4;A0A5C0T839;A0A410R962;A0A5J6BVL6;A0A2R4KPC2;V5NRD7;F6IQG9;V5NQZ6;V5NQX0;A0A6H0Y7E4;V5NRD2;F6IQH3;V5NQR3;V5NQF4;V5NQY1;A0A8G1GEW0;F6IQH1;V5NRE8;V5NQG2;A0A650AP92;F6IQP3;F6IQP2;F6IQP6;F6IQA9;F6IQB0;A0A6M5WT88;V5NSZ1;F6IQG7;A0A7D5K1G8;V5NSW0;F6IQN6;F6IQP4;V5NSW3;Q7YNY6;F8T959;F6IQP5;F6IQN8;F6IQN9;F6IQN5;F6IQP0;A0A481MT93;V5NSY5;V5NSY2;F6IQG8;A0A886NJX7;A0A411G9X4;A0A7G7XYL4;F6IQH2;A0A6C0TDD8;A0A3G2LWT1;V5NRF3;F6IQH0;V5NRF9;A0A2U9AEN7;V5NRG0;V5NSX8;A0A2U9AEN8;Q7YP25;V5NQZ9;A0A3G2YUZ1;O78126;F6IQI4;F6IQI3;A0A3G4R1E9;A0A1W2PRT9;V5NQZ0;A0A455JVC5;A0A0U5QLU5;V5NQU3;V5NQU7;V5NQW5;D3VN25;V5NQX2;V5NQX4;A0A583ZB57;Q8HX85;Q7YNY0;Q9GJ24;Q7YNX7;Q9GJ61;U5YKE8;M1JNG6;F6IR28;F6IR41;F6IQV8;A0A076JT77;P01893;F6IQV4;F6IR34;U5YJI7;F6IQV1;F6IQU9;F6IR44;F6IR43;F6IR36;F6IR42;F6IQU7;F6IQV3;F6IQY9;F6IQU0;F6IR30;F6IQV2;F6IR29;F6IR27;F6IR26;F6IQY7;F6IQS2;F6IR39;F6IR40;B0BKZ4;F6IQS1;F6IQS8;F6IQS5;F6IQS7;F6IQS3;F6IQS6;F6IQV0;F6IQU6;F6IR37;G9FTK0;F6IR35;F6IQT2;F6IQS4;F6IQU8;F6IQU4;A0A0K2CX43;F6IQT0;F6IQS9;F6IQU3;F6IQU2;F6IQU1;F6IQV5;F6IQT4;F6IQT5;F6IQT6;G9HXH5;F6IQU5;F6IQT9;F6IQT8;F6IQT7;F6IQY6;Q5G274;K7DVA1;A5I8L1;A0A858LGJ0;A0A583ZBW3;A0A220A3H0;Q9GJ45;A7LB40;A0A583ZB54;B7VGE8;A0A078N1N5;A0A1D3TZM9;A0A1W2PR11;A0A1T4J2S9;A0A6G6ZQM2;Q9MY41;A0A7I8AUN4;A0A0N7M1B0;A0A6M8DIL0;A4URH6;A6YT91;Q6IVY5;F2XI58;A0A583ZAV6;A0A1W2PQS8;Q8WLS4;F6IR33;F6IR25;U5YKD6;A5PHT6;F6IR38;U5YMF9;U5YJH4;U5YMN1;U5YJH8;F6IQT3;U5YJG6;F6IR45;G9FTJ9;A0A7D4WYW1;A0A5B8RNS7;H2DDR7 HLA-A;HLA-A24AK;HLA;HLA-B;HLA-A*0226;HLA-Cw;HLA-C;HLA-DQB1;HLA-A*33;HLA-A*02;Cw;HLA A;MHC class I HLA-A;HLA-A*0201V3;HLA-A*31;HLA-H HLA class I histocompatibility antigen, A-3 alpha chain;Beta-2-microglobulin;Putative HLA class I histocompatibility antigen, alpha chain H no no 0 0 1 1.5 0.5 1 1 47.739 47.774 4 4.6209E-08 13425 20230619_1881_Aki_TMTPro18x_K_F2 101.47 0 53455 41296 50182 53688 48236 65244 64811 60000 74701 73948 76980 76779 81938 67352 64270 84521 79689 83251 49386 37917 51267 53344 50809 64939 64675 62035 75629 74083 79069 77509 82623 70704 66629 84528 76122 79073 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292120000 3827 1147 3646 7066;7067 5794 5794 1 9606 Homo sapiens -0.06884734401364767 DGEEAGAYDGPR Unmodified 1235.5055 0.50545911 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DJ98;A0A8I5KYJ6;A0A8I5KXE2;A0A8I5KP58;A0A8I5QJM1;H7BZJ3 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 1 0 2 36.377 36.377 2 2.9182E-17 8246 20230619_1880_Aki_TMTPro18x_K_F1 219.5 195.55 128470 89145 101110 116490 128800 170560 136880 139240 212660 159780 199480 233970 213040 191890 178120 188690 245540 242280 118470 81892 105540 116040 132250 167540 139820 144940 211600 162790 206050 232600 215490 199130 185510 192650 234260 229560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1421800000 3828 2389 3647 7068;7069 5795;5796 5795 2 9606 Homo sapiens -0.10287340368972764 DGEHVIDQGDDGDNFYVIDR Unmodified 2277.9774 0.97743324 424 B3KY43;Q6DHZ2;A0A024R712;P31323;Q75MP1 PRKAR2B cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 1.5 0.5 1 1 51.511 51.534 3 1.4135999999999998E-66 14959 20230619_1880_Aki_TMTPro18x_K_F1 301.59 284.45 46764 36386 38737 45730 42687 53184 38312 41863 53381 58963 66195 77196 79414 62984 65517 79472 77468 96525 43166 33396 40118 45492 44011 52943 39378 44011 54080 59228 67951 77041 79943 66348 67609 80498 74138 91429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251750000 3829 424 3648 7070;7071 5797 5797 1 9606 Homo sapiens -0.11043637719103572 DGEIVGLSGR Unmodified 1001.5142 0.5141733 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1;A0A494C0X4;A0A494C1S4 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 2.5 0.5 1 1 44.416 44.494 2 9.5738E-05 11617 20230619_1882_Aki_TMTPro18x_K_F3 163.16 146.61 186800 162200 156210 191220 209150 202170 202630 208450 219150 238130 252990 229920 241560 175370 203160 258790 253900 233870 172560 148720 162210 190870 212720 203860 205210 213280 223790 238720 257260 232060 244900 187220 210370 257150 242300 222470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181370000 3830 1552 3649 7072;7073 5798 5798 1 9606 Homo sapiens 0.013476780582095671 DGELHIAEHPAGHLVLK Unmodified 1834.969 0.96898123 3932 Q15397;B2RDG4 KIAA0020 Pumilio domain-containing protein KIAA0020 yes no 0 0 0 5.25 0.829 1 1 2 43.845 43.921 5 3.4288E-06 11151 20230619_1885_Aki_TMTPro18x_K_F5 107.98 88.901 136270 118700 125520 123370 121900 149520 157220 123210 136380 108460 121210 104970 118290 98884 114270 108530 129580 125070 125970 108710 128380 124610 127900 148620 155750 127400 139390 110380 124880 106600 120630 102760 117070 109850 123800 118640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 903380000 3831 3932 3650 7074;7075;7076;7077 5799;5800 5799 2 9606 Homo sapiens 0.08489549683486075 DGENYVVLLDSTLPR Unmodified 1689.8574 0.85736509 1037;1668 A0A0G2JN29;Q15155;A0A0G2JP90;Q9H049;H3BUC9;A0A7I2V4T6;A0A7I2V6B0;J3KN36;Q5JPE7-2;P69849;Q5JPE7;A0A7I2V3P4;Q5JPE7-3;Q1LZN2;A0A087WTD5 NOMO1;DKFZp547A1913;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 2;Nodal modulator 3 no no 0 0 0 4 0 1 63.174 63.18 3 5.3528E-14 19667 20230619_1883_Aki_TMTPro18x_K_F4 140.84 122.75 12709 8288.6 10441 12612 11520 9618.9 11804 13805 16628 14412 12738 14563 15344 13882 17391 17210 14830 18065 11720 7629.7 10819 12341 11878 10054 12036 13827 16514 14539 13385 14753 15680 14516 17507 17290 14236 17137 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23381000 3832 1037;1668 3651 7078 5801 5801 1 9606 Homo sapiens 0.04003070535691222 DGEQHEDLNEVAK Unmodified 1482.6587 0.65866529 1627 O95831;O95831-3;A0A6Q8PFM5;A0A6Q8PG15;A0A6Q8PFE1;A0A7I2PK44;A0A6Q8PHJ9;A0A6Q8PHC0;O95831-2;E9PMA0;A0A140VK04;O95831-5;A0A6Q8PHJ4 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 0 1 0 1 38.615 38.615 3 6.2943E-08 9468 20230619_1880_Aki_TMTPro18x_K_F1 132.08 103.75 136440 119720 138790 135910 140160 140550 147450 143080 195770 179400 216220 214780 229880 192350 199530 229360 258300 224550 126240 109720 140780 136050 145630 141920 149770 147000 197440 180490 221430 215760 232770 201090 206820 229550 246340 213460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220160000 3833 1627 3652 7079 5802;5803 5802 2 9606 Homo sapiens -0.06335770043119737 DGEQIEQEEDDEK Unmodified 1562.622 0.62200501 806;3082 P13591-1;A0A087WTF6;P13591;P13591-3;P13591-4;A0A087WV75;A0A087WWD4;A0A087WX77;A0A087WTE4;P13591-5;P13591-6;H7BYX6 NCAM1 Neural cell adhesion molecule 1 no no 0 0 0 1 0 1 41.627 41.627 2 0.0022348 10795 20230619_1880_Aki_TMTPro18x_K_F1 92.866 75.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3834 806;3082 3653 7080 5804 5804 1 9606 Homo sapiens -0.13680111450389632 DGETPDPEDPSR Unmodified 1313.5372 0.53715317 1222 A0A140VK27;P09960;B4DVZ8;P09960-2;P09960-4;Q59ES1;P09960-3 LTA4H Leukotriene A-4 hydrolase;Leukotriene A(4) hydrolase yes no 0 0 0 1 0 1 35.285 35.285 2 4.8575E-05 8066 20230619_1880_Aki_TMTPro18x_K_F1 157.66 141.78 28512 20396 36091 31819 43993 50320 43331 39861 42523 40306 51496 32820 32429 30551 47773 15348 31634 24576 26402 18772 36132 31423 45033 49215 43705 41442 43689 40497 51477 33591 34418 30797 47235 16303 30374 23271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84677000 3835 1222 3654 7081 5805 5805 1 9606 Homo sapiens -0.10707392405652172 DGEVPPEEFSTFIK Unmodified 1593.7563 0.75625407 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;Q6ZME7;H0Y827;Q96AY3-2 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 0 0 4 0.816 1 1 1 61.428 61.455 3 4.3348E-05 18917 20230619_1883_Aki_TMTPro18x_K_F4 102.73 83.895 192590 156810 187870 185950 179290 229810 216230 217770 280380 253390 243670 304480 309130 281490 260570 339530 332150 387260 178040 143810 191160 186020 188260 228710 217850 224230 280560 255830 255000 305910 311350 294160 270210 342660 317490 367120 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 291170000 3836 167 3655 7082;7083;7084 5806;5807;5808;5809 5808 4 9606 Homo sapiens -0.016873811670166106 DGEVYCIDAR Unmodified 1196.5132 0.51318702 726;1269 A0A0G2JIS2;A0A1U9X7P8;A0A024RCN9;Q96KQ7-2;Q96KQ7;A0A0G2JRR0;A0A0G2JRN8;Q59FM7;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q71M33;Q9H9B1;A0A1B0GV09 EHMT2;FP13812;EHMT1 Histone-lysine N-methyltransferase EHMT2;Histone-lysine N-methyltransferase EHMT1 no no 0 0 0 1 0 1 43.619 43.619 2 0.018648 11686 20230619_1880_Aki_TMTPro18x_K_F1 77.192 66.961 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3837 726;1269 3656 7085 5810 5810 1 9606 Homo sapiens -0.07720904373036319 DGFFGNPLAPNPADK Unmodified 1558.7416 0.74160705 558 A0A024R972;P11047 LAMC1 Laminin subunit gamma-1 yes no 0 0 0 6.5 0.5 1 1 60.993 61.043 3 0.00050398 18240 20230619_1887_Aki_TMTPro18x_K_F7 85.734 68.795 63095 56688 61333 66777 63406 82521 72288 73943 87060 83109 68696 76795 92148 62851 76127 109380 81740 91145 58364 51969 62536 66815 66056 82027 72821 76356 87181 83318 72425 77807 92452 67804 78192 108030 78219 86729 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113480000 3838 558 3657 7086;7087 5811 5811 1 9606 Homo sapiens -0.015414085244856324 DGFGFIK Unmodified 782.39629 0.39629 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KW72;Q96L66;A0A8I5KTQ3;E9PLT0;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;A0A8I5KPQ8;A0A8I5KS07 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 0 7.5 0.5 1 1 56.383 56.44 2 0.02183 16350 20230619_1887_Aki_TMTPro18x_K_F7 107.66 78.085 477780 403440 417730 459180 379280 456950 469800 467050 580140 610440 513390 426430 637690 449070 438650 611050 502570 461610 441410 369810 429070 459250 400030 462520 471850 480180 582600 603700 534480 442330 636810 471450 454020 602600 479950 440180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 273890000 3839 88 3658 7088;7089 5812;5813 5812 2 9606 Homo sapiens -0.00361229739803548 DGFGGLAAAR Unmodified 933.46683 0.46682918 507 A0A024R8A7;Q96I24 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 0 0 0 6 0 1 44.936 45.025 2 0.0078817 11692 20230619_1886_Aki_TMTPro18x_K_F6 83.623 52.251 371110 224920 361920 369080 416130 446570 406050 445530 487570 345620 416450 451080 459260 362130 405330 308370 492620 411360 342530 207310 369250 361740 427700 445440 412600 452450 488810 358030 432720 449900 464690 373850 417320 316900 469930 389910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105670000 3840 507 3659 7090 5814 5814 1 9606 Homo sapiens -0.0025655642215269836 DGFPSGTPALNAK Unmodified 1273.6303 0.63026569 3839 Q13177;A8K5M4 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase yes no 0 0 0 7.33 0.471 2 1 50.796 50.873 2;3 5.8139E-15 13954 20230619_1887_Aki_TMTPro18x_K_F7 224.58 190.62 129230 100660 114060 123800 120110 135150 133790 119640 150420 145230 138490 137420 148450 123190 138480 159500 150890 142160 119350 92368 117280 123270 124720 135460 134590 124030 151860 145200 143090 139400 150710 129460 141790 158680 144190 135240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 417690000 3841 3839 3660 7091;7092;7093 5815;5816 5815 2 9606 Homo sapiens 0.004395768382437382 DGFQHPAR Unmodified 926.43586 0.4358634 4208 Q8IX12-2;Q8IX12;A0A0C4DGG8;F5H2E6;F5H3E1;F5H1H2 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 0 0 0 3.71 0.7 3 3 1 26.005 26.099 3 0.00030589 4505 20230619_1883_Aki_TMTPro18x_K_F4 149.4 125.43 64830 49328 65742 71367 93203 83530 83524 76411 97688 71666 88153 84100 83193 78797 75726 58086 99575 81973 59927 45349 67050 70390 94233 83408 85179 78455 98250 73128 90507 84514 84788 80357 78244 60036 94920 77670 7 7 6 7 7 7 7 7 7 7 6 6 7 7 6 6 7 7 38833000 3842 4208 3661 7094;7095;7096;7097;7098;7099;7100 5817;5818;5819;5820;5821;5822;5823;5824 5823 8 9606 Homo sapiens -0.03029709736381392 DGFQPSR Unmodified 805.37187 0.37186616 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 2.5 0.5 1 1 33.861 33.922 2 0.028102 7130 20230619_1882_Aki_TMTPro18x_K_F3 96.111 62.008 345760 175010 303640 330490 315980 418540 239280 254790 407280 248670 260200 263730 334140 257090 217460 207460 383110 268870 318630 161800 312260 321690 326250 412350 251000 271520 399220 252680 276930 266670 333190 263030 232180 212810 364160 255150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 250470000 3843 1817 3662 7101;7102 5825 5825 1 9606 Homo sapiens -0.038604898933272125 DGFVALSK Unmodified 835.44397 0.44396847 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 8 0 1 51.803 51.88 2 0.010092 14381 20230619_1888_Aki_TMTPro18x_K_F8 99.802 1.3449 355480 296310 300350 344540 346630 377210 375940 373570 449830 423390 425420 416630 452810 352460 381040 501620 464950 445830 328320 271680 310670 344450 357350 378950 379580 383210 453140 425050 438700 421290 457740 373650 394030 498190 443920 424110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138850000 3844 1661 3663 7103 5826 5826 1 9606 Homo sapiens 0.01966424460374583 DGFVQNVHTPR Unmodified 1268.6262 0.62618337 2834 D3DWL9;Q10570;B4DEF4 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes no 0 0 0 6 0 1 37.88 37.956 3 2.2494E-06 8698 20230619_1886_Aki_TMTPro18x_K_F6 145.14 128.79 99077 64685 134980 119960 151740 125910 143970 138040 115440 122360 152700 94581 83725 65039 139990 50440 74254 45717 91773 59703 134250 116660 155550 127170 144810 139770 120660 123560 151600 96348 90147 67338 137240 50984 71484 43577 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149230000 3845 2834 3664 7104 5827 5827 1 9606 Homo sapiens 0.002615321351640887 DGFVTVDELK Unmodified 1121.5605 0.56045479 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-10;O43852-6;O43852-5;O43852-13;O43852-9;O43852-11;O43852-14 CALU Calumenin yes no 0 0 0 3.8 0.748 2 2 1 57.228 57.255 2;3 1.1027E-05 17162 20230619_1883_Aki_TMTPro18x_K_F4 150.61 103.42 180020 141880 162880 179350 152680 215930 182720 192760 296320 238430 234670 319000 307410 288120 200950 367940 354110 419170 166290 130220 166890 178500 160840 214910 185960 199740 292880 241160 247260 319040 306790 302350 215610 370760 337780 397340 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 616820000 3846 2386 3665 7105;7106;7107;7108;7109 5828;5829;5830 5829 3 9606 Homo sapiens 0.0045369816962193 DGFYEAELCPDR Unmodified 1470.6085 0.60854397 884 Q04206;A0A087X0W8;Q04206-3;Q04206-2;B4E082;E9PKH5;Q2TAM5;E9PKV4;Q96CP1;Q96F54;E9PQS6;E9PI38;Q04206-4;E9PRX2;E9PMD5;E9PNV4;E9PJR1 RELA Transcription factor p65 yes no 0 0 0 1.5 0.5 1 1 51.811 51.811 2 1.6717E-12 15102 20230619_1880_Aki_TMTPro18x_K_F1 194.6 167.48 29494 23284 26860 32222 29564 36040 33810 29479 37894 34807 34795 34219 39388 35051 34735 44510 41031 44305 27246 21392 27585 31836 30643 35989 33955 30729 38250 34896 36044 34815 39852 36625 35805 44533 39220 42071 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20861000 3847 884 3666 7110;7111 5831;5832 5831 2 9606 Homo sapiens -0.10793595972654657 DGGAQHAQYVGPYR Unmodified 1517.7011 0.70113922 718 A0A140VJF6;A0A024RCE9;Q8IWQ3-3;Q8IWQ3-2;Q8IWQ3-4;Q8IWQ3 BRSK2 Serine/threonine-protein kinase BRSK2 yes no 0 0 0 5.5 0.5 1 1 34.086 34.152 3 1.0926E-11 7226 20230619_1885_Aki_TMTPro18x_K_F5 175.48 156.86 25545 22409 26946 30751 22649 22419 23246 23917 29778 29146 35037 30202 34017 28217 28678 34600 53635 33099 23643 20578 27205 30254 23869 23345 23628 24488 30167 29210 35614 30573 34521 29511 30655 34567 50935 31529 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30637000 3848 718 3667 7112;7113 5833;5834 5833 2 9606 Homo sapiens -0.03700330124274842 DGGAWGTEQR Unmodified 1075.4683 0.46828574 1431 A0A384MR27;P09382 LGALS1 Galectin-1 yes no 0 0 0 2 0.816 1 1 1 36.341 36.379 2 2.3016E-09 8098 20230619_1882_Aki_TMTPro18x_K_F3 199.46 177.95 427740 345130 400340 391120 784750 789300 758150 721700 542370 608390 597240 556230 727540 508440 546530 495870 691450 506930 395280 316410 414830 396520 782710 766460 758870 738350 567720 619070 615670 565380 729070 526000 566510 499430 658900 482040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2662200000 3849 1431 3668 7114;7115;7116 5835;5836;5837 5837 3 9606 Homo sapiens -0.06642967124025745 DGGFCEVCK Unmodified 1070.4161 0.41611551 58 Q53FJ5;A0A024QZQ2;Q59EN5;P07602;P07602-2;P07602-3;B4DEK5;B4DRB7;Q5BJH1 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes no 0 0 0 3.5 0.5 1 1 45.035 45.093 2 0.00073765 11868 20230619_1882_Aki_TMTPro18x_K_F3 125.16 92.94 228010 157710 191790 238090 262250 278850 297750 306740 433180 273540 318240 415660 346690 309670 277280 421840 470330 527490 210350 145120 199230 234260 268000 279410 302090 310550 428470 282790 333710 411870 350050 328840 294640 427480 448530 499680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 175220000 3850 58 3669 7117;7118 5838;5839 5838 2 9606 Homo sapiens -0.1162758985367418 DGGFCEVCKK Unmodified 1198.5111 0.51107853 58 Q53FJ5;A0A024QZQ2;Q59EN5;P07602;P07602-2;P07602-3;B4DEK5;B4DRB7;Q5BJH1 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes no 0 0 1 6.5 0.5 1 1 42.682 42.766 3 0.0026699 10386 20230619_1887_Aki_TMTPro18x_K_F7 83 57.614 280340 225880 297600 336400 425470 415830 453890 401590 513680 411220 471310 514550 435790 351270 430740 428100 484000 479520 259330 207680 303080 331510 432090 414130 457500 411630 517840 418310 484330 511930 445590 371860 441010 431870 462540 454920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 223250000 3851 58 3670 7119;7120 5840;5841 5841 2 9606 Homo sapiens -0.08023656382488298 DGGGRGPDELEGPDSK Unmodified 1584.7016 0.70159273 1307 P48634;A0A1U9X982;A0A1U9X9A9;A0A1U9X999;A0A1U9X998;A0A1U9X993;A0A1U9X988;A0A1U9X996;A0A1U9X985;A0A1U9X977;A0A1U9X975;A0A1U9X974;A0A1U9X9A5;A0A1U9X987;A0A1U9X972;P48634-3;P48634-2;P48634-4;B4DZ56 PRRC2A Protein PRRC2A yes no 0 0 1 2 0.816 1 1 1 38.328 38.386 3 4.0542E-11 9061 20230619_1881_Aki_TMTPro18x_K_F2 136.39 100.58 77239 56465 71258 69038 83243 77669 77797 77697 97051 85817 97936 89874 95991 76834 78796 109950 107010 81047 71328 51824 73027 68824 85303 77929 79363 79584 97785 86439 100270 90700 97211 81405 82149 108260 101940 77381 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85881000 3852 1307 3671 7121;7122;7123 5842;5843 5843 2 9606 Homo sapiens -0.06736999985696457 DGGGTNSITVR Unmodified 1075.5258 0.52580062 1644 P33527-9;I3L4X2;P33527-5;A0A7I2V2E0;P33527-2;P33527-3;P33527;Q9UQ98;Q68CP7;A0A0A0MS99;P33527-4;A0A7I2V4C6;P33527-6;P33527-7;P33527-8;G0ZCM3 ABCC1;MRP;DKFZp781G125 Multidrug resistance-associated protein 1 yes no 0 0 0 3.5 0.5 1 1 34.438 34.494 2 5.1162E-06 7335 20230619_1883_Aki_TMTPro18x_K_F4 158.47 127.24 18994 9830.9 22283 22927 29744 30596 22823 25089 27100 21149 32781 36251 29599 27078 34397 15297 35911 37240 17548 9119.9 22472 22148 30099 30209 23562 25906 27563 22053 33262 35768 30546 27627 34867 16854 34354 35133 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40235000 3853 1644 3672 7124;7125 5844 5844 1 9606 Homo sapiens -0.00894124918477246 DGGLICTSCR Unmodified 1137.4907 0.49067744 373 A0A024R611;P31146;Q59G88;H3BRY3;H3BTU6;H3BRJ0;Q6ZW98 CORO1A Coronin;Coronin-1A yes no 0 0 0 5 0 1 39.667 39.757 2 0.0020723 9408 20230619_1885_Aki_TMTPro18x_K_F5 97.431 71.047 59342 50900 62922 60779 71372 77759 63540 63435 76059 58395 75693 71773 64371 61415 71530 66033 88644 73500 54915 46676 63726 60795 73256 77020 64929 65666 76685 59739 77170 71936 66465 63908 73517 66726 84544 69787 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50289000 3854 373 3673 7126 5845 5845 1 9606 Homo sapiens -0.07256827042283476 DGGLQNMELHGMIMLR 2 Oxidation (M) 1845.8536 0.85355882 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 2 0 6 0 1 49.563 49.641 3 0.011813 13726 20230619_1886_Aki_TMTPro18x_K_F6 57.703 44.936 35931 29653 39193 43588 41196 39675 40973 43469 50329 47717 46792 48336 47746 39168 45089 54965 54987 52275 33252 27257 39590 42811 42583 40508 41629 44261 50612 48010 48228 48739 48579 41544 46497 54799 52497 49689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72006000 3855 2181 3674 7127 5846 5846 1348;1349 1 9606 Homo sapiens -0.035533818256681116 DGGNQEVEIAR Unmodified 1186.5578 0.55782903 216 A0A0S2Z472;A8KAH7;A0A024R2W3;P13861-2;P13861;H7C330 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 0 0 1 0 1 36.178 36.178 2 0.0057055 8434 20230619_1880_Aki_TMTPro18x_K_F1 90.913 51.891 56234 38640 56044 62431 68838 75800 70442 78649 82374 72646 87334 90898 91894 77252 75399 70199 116170 102650 51945 35587 57184 61236 70541 75657 71318 79959 83403 74297 89576 90957 92893 79813 79168 72493 110670 97204 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96497000 3856 216 3675 7128 5847 5847 1 9606 Homo sapiens -0.027987572353367796 DGGSGNSTIIVSR Unmodified 1261.6262 0.62624295 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 5 0 1 37.822 37.914 2 3.9103E-15 8659 20230619_1885_Aki_TMTPro18x_K_F5 204.32 190.2 34915 24694 30412 30616 33036 35873 33070 32794 41144 41219 52472 50267 47118 40149 43996 45306 50591 50273 32223 22671 31306 30504 34127 35809 33605 33942 41893 41481 53046 50282 48108 42021 45164 45723 48339 47698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35853000 3857 594 3676 7129 5848 5848 1 9606 Homo sapiens 0.005894873445186022 DGGSVVGASVFYK Unmodified 1284.635 0.63501672 3273 O60271;O60271-4;O60271-2;O60271-3;O60271-5;O60271-9;B4DS36;Q5JB53 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 0 8 0 1 55.298 55.36 2 4.364E-06 15894 20230619_1888_Aki_TMTPro18x_K_F8 169.37 141.75 43877 34640 36945 40415 32667 42460 43091 43033 46160 48364 49419 45432 48769 43785 50010 53630 43906 51100 40510 31769 38073 40376 34616 42783 42947 44064 46987 48501 50507 46224 49857 45731 50520 53585 42118 48535 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14892000 3858 3273 3677 7130 5849 5849 1 9606 Homo sapiens 0.004084609809979156 DGGVQACFSR Unmodified 1095.4767 0.47674194 3415 P08754 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 0 0 0 5 0.816 1 1 1 39.501 39.575 2 2.5201E-05 9308 20230619_1885_Aki_TMTPro18x_K_F5 157.78 134.95 422080 317470 338690 380750 387690 397780 407040 381990 444480 445700 449010 408610 537750 375210 355620 528130 497930 416960 389450 291280 351940 379560 399320 400730 410400 393120 451090 445930 463860 415700 536910 396470 373600 521540 474480 397510 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 627370000 3859 3415 3678 7131;7132;7133 5850;5851;5852 5851 3 9606 Homo sapiens -0.06717736479095038 DGHHCCLK Unmodified 1025.4171 0.41711857 3865 Q13642-4;Q13642-5;Q13642-1;Q53FI7;B7Z4B7;B7Z5V0;B7Z9A1;B7Z5T3;B3KRI9;Q5JXI8;Q13642;A0A494C0D6;Q5JXI3;Q5JXH8;Q5JXH7;Q5JXI2;A0A0D9SFZ9;Q5JXH9;A0A0D9SFB0;A0A0D9SFI6;Q13642-3;Q5JXI0;A0A0D9SGB2;A0A0D9SGD1;A0A494C0J3;A0A0D9SEY7;A0A494C1G1 FHL1 Four and a half LIM domains protein 1 yes no 0 0 0 5.5 0.5 1 1 28.215 28.267 4 0.028829 5058 20230619_1885_Aki_TMTPro18x_K_F5 61.999 43.268 26215 8177.4 12075 17059 39315 8353.6 19689 32947 31374 19452 41044 47319 31250 41683 11065 18385 11993 33229 24039 7600.4 13831 16393 37939 9746.1 21373 31569 31623 21219 41219 46546 31325 41876 11709 19678 11613 31326 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28976000 3860 3865 3679 7134;7135 5853 5853 1 9606 Homo sapiens -0.09457330694112898 DGIDDESYGQIFKPIISK Unmodified 2024.0102 0.01023692 4305 Q92769;Q92769-3;B3KUJ5 HDAC2 Histone deacetylase 2;Histone deacetylase yes no 0 0 1 6.5 0.5 1 1 61.754 61.801 3 3.0823E-06 18596 20230619_1887_Aki_TMTPro18x_K_F7 97.579 89.587 353730 276580 332020 339180 305300 395300 297180 320120 436760 440550 470150 494420 554830 366240 431060 489390 476940 511840 326820 253790 338730 338110 319830 393640 304660 335420 438540 440450 484490 495020 556940 389020 443370 490880 456130 485790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 413560000 3861 4305 3680 7136;7137 5854 5854 1 9606 Homo sapiens 0.03919221141654816 DGIEFAFK Unmodified 925.45453 0.45453316 1775;3977 A0A8I5KVF8;Q6MZM4;Q6MZP3;Q8N3U4;Q8N3U4-2;B2R8Y6;Q6AI02;Q6MZM3;B4DQ46;Q68DW7;Q4LE48;Q8WVM7-2;Q8WVM7;B4E2Q7 DKFZp686P16143;DKFZp686I05169;STAG2;DKFZp686P168;DKFZp686C21148;DKFZp781D1416;STAG1 variant protein;STAG1 Cohesin subunit SA-2;Cohesin subunit SA-1 no no 0 0 0 6 0 1 58.949 59.014 2 0.011631 17715 20230619_1886_Aki_TMTPro18x_K_F6 96.492 47.133 75713 67548 80237 82756 73749 90360 80611 84975 101140 98290 97784 99138 101900 90350 95655 118740 107790 117960 70083 61950 81056 82432 77390 90655 81552 87528 101750 98663 100670 100340 103610 94977 98182 118750 103090 112010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119380000 3862 1775;3977 3681 7138 5855 5855 1 9606 Homo sapiens -0.011175928851912431 DGIEPMWEDEK Unmodified 1347.5653 0.56528217 3393 P06730;P06730-2;Q32Q75;X5D7E3;D6RBW1;P06730-3;B7Z2T1;H0Y8J7 EIF4E Eukaryotic translation initiation factor 4E yes no 0 0 0 1.5 0.5 2 2 55.547 55.557 2;3 7.8438E-05 16807 20230619_1881_Aki_TMTPro18x_K_F2 122.51 91.325 107180 98142 125660 100660 99189 135710 141920 119790 124570 145900 134110 121960 144830 119050 147640 162080 135660 134500 99318 89854 125620 102010 106340 134180 140080 124180 128380 145310 137600 124880 147560 125180 149500 160610 129900 128040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 466290000 3863 3393 3682 7139;7140;7141;7142 5856;5857 5857 2 9606 Homo sapiens -0.094597857499366 DGIILCELINK Unmodified 1286.6904 0.69042311 3933 Q15417;Q15417-3;Q15417-2;E9PDU6;Q9BWY6 CNN3 Calponin-3;Calponin yes no 0 0 0 7.5 0.5 1 1 63.118 63.147 3 2.4245E-05 19251 20230619_1887_Aki_TMTPro18x_K_F7 139.15 100.52 317830 268010 302220 278590 165160 219440 202890 214300 244580 343940 303030 267050 350950 270360 260030 331000 289540 284020 293830 245480 306040 279940 183830 226390 204070 222800 249660 338180 309900 274730 352100 282130 268030 328840 276700 270280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 860200000 3864 3933 3683 7143;7144 5858 5858 1 9606 Homo sapiens 0.05854551177094436 DGIISDIFDKK Unmodified 1249.6554 0.65541781 1711 A0A7P0TAL9;A0A7P0TBA9;B7ZKK7;P19525-2;P19525;Q8IW76;A0A7P0Z4M0 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes no 0 0 1 7 0 1 60.803 60.845 3 0.000318 18185 20230619_1887_Aki_TMTPro18x_K_F7 104.87 67.391 133440 97565 134840 139950 100450 156050 127230 139140 167950 186900 151380 159870 202550 151730 156710 205100 162880 194740 123320 89699 136420 138010 108200 156030 128070 144540 168340 185500 158350 163230 202780 159720 160780 204510 156010 184960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292050000 3865 1711 3684 7145 5859 5859 1 9606 Homo sapiens 0.040576316407850754 DGIPVSSEAER Unmodified 1158.5517 0.55168102 1917 A6PVJ3;H0Y621;A2TJK5;Q5JWS0;H0Y5K5;Q9Y282;Q9Y282-3;Q9Y282-2;A6PVJ2;A0A0C4DH46 ERGIC3 Endoplasmic reticulum-Golgi intermediate compartment protein 3 yes no 0 0 0 1 0 1 38.797 38.797 2 2.819E-06 9542 20230619_1880_Aki_TMTPro18x_K_F1 163.66 139.69 47612 29383 44929 48989 60691 58584 69073 55579 95033 61689 68656 74788 70031 65690 63374 72184 75352 82435 43937 27087 46132 47956 61994 58436 69869 57189 94172 62504 71775 75007 71181 68384 65272 72984 72030 78163 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43969000 3866 1917 3685 7146 5860 5860 1 9606 Homo sapiens -0.021252754668466878 DGIQLSEYLPEVK Unmodified 1489.7664 0.76642482 4278 Q8WUM0;B4E206;B4E3T7;A0A024R3R6 NUP133 Nuclear pore complex protein Nup133 yes no 0 0 0 5 0 1 62.339 62.386 3 0.0010621 19000 20230619_1885_Aki_TMTPro18x_K_F5 84.566 43.799 69551 55944 71321 77658 68865 81266 69423 75350 88741 86006 80231 73057 87412 77018 86412 97964 83803 89197 64319 51395 72302 76664 71810 81740 70600 77657 89007 85983 82995 74943 88956 80416 87811 97586 80245 84792 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196310000 3867 4278 3686 7147 5861 5861 1 9606 Homo sapiens 0.041132265582064065 DGKLDFEEFMK Unmodified 1357.6224 0.62240312 2648 B7ZB41;B4E290;Q6NUK1-2;Q6NUK1;A0A3B3IU96;J3KN42 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes no 0 0 1 6 0 1 60.217 60.274 3 0.0010276 18212 20230619_1886_Aki_TMTPro18x_K_F6 93.206 63.147 56869 44811 52557 55844 35083 50961 43691 59368 75413 83799 65749 91331 123630 93880 44881 177430 161610 137080 52540 41123 53509 55441 38231 52069 44592 60681 74779 83608 70504 92582 120680 101160 54186 174250 153330 130720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63142000 3868 2648 3687 7148 5862 5862 1 9606 Homo sapiens -0.042103184735651666 DGLAEDLAALK Unmodified 1114.587 0.58700389 2433 B3KWQ6;P41219;P41219-2;F8W835 PRPH Peripherin yes no 0 0 0 4 0.816 1 1 1 61.692 61.719 2;3 9.0396E-05 19132 20230619_1882_Aki_TMTPro18x_K_F3 157.24 100.51 837220 798260 861840 918680 664270 876520 839510 817380 1077500 1127800 1197100 1182300 1187000 1095800 1244000 1321200 1311200 1426500 775140 731500 870950 917490 711740 888140 844050 847750 1089100 1124900 1222200 1195000 1215100 1145000 1268200 1329700 1254700 1353400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 924050000 3869 2433 3688 7149;7150;7151 5863;5864;5865 5863 3 9606 Homo sapiens 0.034293870609417354 DGLAEEVQR Unmodified 1015.4934 0.49343786 3949 Q16352;Q59EM6 INA Alpha-internexin yes no 0 0 0 1 0 1 39.287 39.287 2 0.00048767 9765 20230619_1880_Aki_TMTPro18x_K_F1 134.05 69.787 364920 297910 313660 228110 68346 76208 104750 114330 104050 273670 336280 324060 297510 264220 278420 339860 385550 347880 337040 272280 318480 234760 91569 89957 104250 118690 115720 269180 332270 324710 304040 278440 289690 340570 367600 330470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194960000 3870 3949 3689 7152 5866 5866 1 9606 Homo sapiens -0.013689123214703613 DGLAFNALIHR Unmodified 1225.6568 0.65675521 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;B4E337;B4DSX0 ACTN4 Alpha-actinin-4 no no 0 0 0 1.5 0.5 1 1 52.086 52.105 3 1.6602E-17 15210 20230619_1880_Aki_TMTPro18x_K_F1 234.92 161.66 31573 24916 27888 30270 25634 26237 26577 28446 34429 41621 35857 40756 46766 37369 32105 45538 38188 48751 29160 22860 28608 30083 26837 26902 27003 29260 34746 41319 37215 41276 46671 39112 33318 45767 36553 46231 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 263880000 3871 1069 3690 7153;7154 5867 5867 1 9606 Homo sapiens 0.052953105202277584 DGLALGPGPFVTALEYATDTK Unmodified 2135.0787 0.078650837 3171 K7ER15;V9HW73;Q9H0R4-2;Q9H0R4 HDHD2;HEL-S-301 Haloacid dehalogenase-like hydrolase domain-containing protein 2 yes no 0 0 0 7 0.816 1 1 1 66.403 66.431 3 2.9769E-16 20670 20230619_1887_Aki_TMTPro18x_K_F7 149.16 127.06 17198 14809 17113 17076 13819 17617 16912 18358 15375 16288 19639 21584 21470 19422 20416 22890 18564 24164 15907 13576 17343 17073 14710 17786 16842 18649 15920 16727 20047 21606 21806 20281 20693 23011 17819 22917 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84072000 3872 3171 3691 7155;7156;7157 5868 5868 1 9606 Homo sapiens 0.056514657215757325 DGLEVAVLPHNIR Unmodified 1431.7834 0.78341229 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 0 5.5 0.5 1 1 49.945 50.022 3 5.3575E-11 13903 20230619_1886_Aki_TMTPro18x_K_F6 179.6 129.38 42370 36582 42576 40585 40081 52992 44847 46124 66630 53491 48799 50050 55484 45643 48174 55644 48513 53928 39193 33523 43194 40836 42067 52474 45610 47774 65914 53603 51198 50810 56062 47767 49177 55641 46451 51219 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 390860000 3873 1532 3692 7158;7159 5869 5869 1 9606 Homo sapiens 0.08479191954688758 DGLGFCALIHR Unmodified 1257.6288 0.6288259 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;G3V2N5;A0A804HJQ9;G3V2W4;B4DRP5;A0A804HJN7;G3V2X9 ACTN1 Alpha-actinin-1 yes no 0 0 0 1.5 0.5 1 1 52.512 52.528 3 3.2462E-09 15365 20230619_1880_Aki_TMTPro18x_K_F1 181.87 147.34 55281 45636 50929 47668 37911 40636 55001 54549 63322 67809 54299 49955 70342 49636 49667 67417 60076 58351 51086 41804 51883 47938 40872 41975 54730 55109 63735 67259 56789 51524 70241 52207 51539 66901 57368 55524 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 487000000 3874 387 3693 7160;7161 5870 5870 1 9606 Homo sapiens 0.010316642684756516 DGLILTSR Unmodified 873.49198 0.4919813 4402 V9HWC2;Q99497;K7ELW0;K7EN27 HEL-S-67p;PARK7 Protein deglycase DJ-1 yes no 0 0 0 6 0.816 1 1 1 45.903 45.986 2 0.0017353 12039 20230619_1885_Aki_TMTPro18x_K_F5 137.9 33.539 1093300 885460 914800 1026700 1046200 1188400 1161700 1123900 1472100 1322200 1316100 1325200 1399400 1151100 1246100 1560900 1427500 1453900 1009600 811930 946910 1027500 1080500 1188100 1173800 1157900 1475800 1326100 1361300 1339700 1418300 1214900 1281600 1555000 1364200 1382000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5432900000 3875 4402 3694 7162;7163;7164 5871;5872;5873 5871 3 9606 Homo sapiens 0.05017498380414054 DGLLENQTPEFFQDVCKPK Unmodified 2264.0783 0.078333261 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 1 5.78 1.31 2 2 2 2 1 60.273 60.313 3;4 3.023E-10 18482 20230619_1883_Aki_TMTPro18x_K_F4 138.08 127.93 317970 269590 312220 296960 208090 266670 278300 274590 270370 375780 373610 315700 369050 298840 341620 398990 350960 325530 294040 247050 316000 297460 226510 272190 276590 282720 280390 372310 377890 322880 375320 314130 348700 395090 335530 310060 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1960699999.9999998 3876 3606 3695 7165;7166;7167;7168;7169;7170;7171;7172;7173 5874;5875;5876;5877 5874 4 9606 Homo sapiens -0.0031427726999027072 DGLLPENTFIVGYAR Unmodified 1663.857 0.85697116 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A8Q3WL93;A0A8Q3WLT0;A0A8Q3WL80;E7EM57;A0A8Q3WL83;E9PD92;A0A8Q3WL90 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 7 0 1 62.328 62.364 2 2.6869E-18 18872 20230619_1887_Aki_TMTPro18x_K_F7 203.61 166.5 101210 84557 86262 107880 120680 135600 129670 121140 164200 146750 155500 166960 141770 145600 175390 157540 172810 200940 93480 77600 89546 107350 122970 134670 131200 125450 164920 147610 159500 167790 146910 151480 177530 160600 165560 190290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 378860000 3877 1464 3696 7174 5878 5878 1 9606 Homo sapiens 0.05159695606516834 DGLMYEQYR Oxidation (M) 1189.5074 0.50737336 18 D6RB59;A0A024QYZ6;O60645;Q69YP2;Q6ZNJ2;H0Y995 EXOC3;DKFZp762K123;FLJ00339 Exocyst complex component 3 yes no 0 1 0 3 0 1 42.596 42.662 2 0.0084528 10753 20230619_1882_Aki_TMTPro18x_K_F3 83.168 57.36 24908 20794 22832 29596 29590 35632 32551 29204 41767 32162 36429 32657 29810 29481 33064 31993 37001 37872 23018 19106 23518 29218 30321 35408 32909 30369 41772 32391 37316 33033 30825 30641 33777 32443 35371 35906 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11494000 3878 18 3697 7175 5879 5879 8 1 9606 Homo sapiens -0.07980002884710302 DGLNDDDFEPYLSPQAR Unmodified 1950.8595 0.85954994 2661 B5BU99;Q9Y5A9;S4R3J8 YTHDF2 YTH domain-containing family protein 2 yes no 0 0 0 2.5 0.5 1 1 58.492 58.514 2 1.0092E-37 17999 20230619_1881_Aki_TMTPro18x_K_F2 250.89 230.04 16435 12966 15950 16204 12573 14285 13533 13086 17805 18434 20357 16998 20675 17597 17463 24080 20270 20163 15190 11899 16191 16075 13365 14566 13732 13602 18000 18305 20752 17366 20939 18471 18006 23855 19366 19193 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15507000 3879 2661 3698 7176;7177 5880 5880 1 9606 Homo sapiens -0.07784545517120023 DGLSCLIVLLQR Unmodified 1385.7701 0.77007041 2332 B2RWN5;Q5T3Q7;Q9H583 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 4 0 1 64.719 64.728 3 0.018669 20426 20230619_1883_Aki_TMTPro18x_K_F4 43.549 15.188 14463 12631 10947 12296 11044 14352 14716 16255 17423 12365 14692 14517 16898 16114 14890 18370 16985 18278 13352 11561 11427 12482 11591 14400 14707 16364 17466 12781 15298 14712 17096 16679 15312 18409 16240 17356 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130640000 3880 2332 3699 7178 5881 5881 1 9606 Homo sapiens 0.09261617851097981 DGLSEAAAQSR Unmodified 1103.5207 0.52071524 3832 Q13057;Q13057-2 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes no 0 0 0 2.5 0.5 1 1 36.048 36.104 2 8.237E-12 8102 20230619_1881_Aki_TMTPro18x_K_F2 203.78 148.41 97895 67028 80689 86047 114880 117380 124180 121380 171430 113360 141720 138650 148100 125290 128060 145340 168530 154550 90297 61567 83958 85751 116910 116410 126030 123480 170550 115890 147030 139250 150050 130740 132900 146200 160760 146740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107200000 3881 3832 3700 7179;7180 5882;5883 5882 2 9606 Homo sapiens -0.026904287811021277 DGLTDVYNK Unmodified 1023.4873 0.48728985 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHJ0;A0A5F9ZHD4;A0A5F9ZI66;A0A5F9ZHH9;H0YEL7 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 4.5 0.5 1 1 48.317 48.376 2 1.0491E-11 13048 20230619_1885_Aki_TMTPro18x_K_F5 218.82 151.79 357630 323360 348260 393500 474740 456520 469170 444430 610900 519260 561530 490390 540500 454030 477050 597620 625210 546620 330840 296530 356700 392440 482640 456790 477520 456850 612100 520170 576940 498350 549440 477130 495030 595040 596220 520010 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 725820000 3882 1208 3701 7181;7182 5884;5885;5886 5885 3 9606 Homo sapiens -0.023514305530056845 DGLVVFGK Unmodified 833.4647 0.46470391 897 A0A090N7T9;Q12765;Q12765-2;C9K052;B8ZZP4;C9J7U9;B4DE46 SCRN1 Secernin-1 yes no 0 0 0 7.5 0.5 2 2 56.665 56.722 2;3 0.0088145 16412 20230619_1888_Aki_TMTPro18x_K_F8 112.17 43.75 231000 189110 201490 258510 224210 237750 238170 223070 256130 258400 288830 276540 285610 240970 280590 284670 278950 299830 213380 173690 207800 254960 231450 241660 239900 230000 261240 259810 294610 278780 291310 252080 285350 286220 267060 284540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 588080000 3883 897 3702 7183;7184;7185;7186 5887;5888 5888 2 9606 Homo sapiens 0.04131014840049829 DGMAFNALIHK Oxidation (M) 1231.6019 0.60194245 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 1 0 1 0 1 50.031 50.031 3 0.020509 14422 20230619_1880_Aki_TMTPro18x_K_F1 56.205 38.731 38206 29760 30164 37649 33879 40157 41877 41810 49829 40813 42908 33518 39810 29347 41365 39570 45160 37221 35256 27316 31421 37399 35161 40444 41989 42567 50000 41092 44156 34256 40779 30978 42231 39474 43117 35406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29211000 3884 2337;3778;3779 3703 7187 5889 5889 1444 1 9606 Homo sapiens -0.00459444342709503 DGMAFNALIHK Unmodified 1215.607 0.60702783 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 53.941 53.941 3 8.1144E-05 15996 20230619_1880_Aki_TMTPro18x_K_F1 121.68 87.147 158230 114490 121040 134550 113400 166100 164680 169330 199470 169670 144820 148170 181160 156240 163410 188060 152220 178630 145920 105040 126090 134670 120230 165530 164080 172700 199030 170890 152790 151710 182920 162600 166010 187880 145940 169660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129810000 3885 2337;3778;3779 3703 7188;7189 5890;5891 5890 2 9606 Homo sapiens 0.00784859519899328 DGMDNQGGYGSVGR Oxidation (M) 1427.5736 0.57355545 44 Q53F48;A0A024QZK8;P31942-2;P31942;P31942-3;B4DHY1;A0A024QZP1;P31942-4 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes no 0 1 0 2 0.816 1 1 1 33.809 33.837 2 9.257E-08 7144 20230619_1881_Aki_TMTPro18x_K_F2 145.28 141.12 30540 16801 24578 29118 34451 32442 31143 28406 42967 33862 40389 43840 35813 33512 36143 38506 45707 41337 28136 15505 25631 28410 34907 32459 31942 29461 42965 34255 41381 43689 36746 35154 37286 38770 43609 39248 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 333970000 3886 44 3704 7190;7191;7192 5892;5893;5894 5893 20 3 9606 Homo sapiens -0.12312838780599122 DGMDNQGGYGSVGR Unmodified 1411.5786 0.57864083 44 Q53F48;A0A024QZK8;P31942-2;P31942;P31942-3;B4DHY1;A0A024QZP1;P31942-4 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes no 0 0 0 2.5 0.5 1 1 38.31 38.368 2 5.6364E-46 9046 20230619_1881_Aki_TMTPro18x_K_F2 293.31 289.42 214030 170530 190770 205650 237190 254740 208770 226090 314080 284640 301800 303750 326010 272740 244000 365800 346040 324910 197690 156440 196480 205430 242150 253260 215430 234430 313520 285240 311150 306590 328150 287220 255860 363450 329960 309110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 301620000 3887 44 3704 7193;7194 5895;5896 5895 2 9606 Homo sapiens -0.11068534917990291 DGMEYPFIGEGEPHVDGEPGDLR Oxidation (M) 2531.0911 0.091082791 4656 Q9UBS4;B3KW63;H7C2Y5 DNAJB11 DnaJ homolog subfamily B member 11 yes no 0 1 0 1.5 0.5 1 1 54.483 54.495 3 5.9051E-07 16337 20230619_1881_Aki_TMTPro18x_K_F2 96.708 80.215 11279 12130 13482 14928 11645 13129 12238 14112 14345 11118 14104 16694 16648 15480 15839 18750 16244 18930 10467 11119 13492 14823 12256 13435 12383 14274 14474 11571 14613 16662 16881 16170 16160 18791 15556 17968 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151230000 3888 4656 3705 7195;7196 5897 5897 2846 1 9606 Homo sapiens -0.11321910668357305 DGMEYPFIGEGEPHVDGEPGDLR Unmodified 2515.0962 0.096168169 4656 Q9UBS4;B3KW63;H7C2Y5 DNAJB11 DnaJ homolog subfamily B member 11 yes no 0 0 0 2 0.816 1 1 1 57.807 57.822 3 2.885E-05 17772 20230619_1881_Aki_TMTPro18x_K_F2 84.762 79.658 9306.3 6268.8 7753.3 8969.9 6934.4 9173.5 8758.4 8431.9 11188 9345.9 8945.1 10735 11805 11447 10350 10806 12905 12051 8583.9 5765.4 8002.2 8835.1 7336.4 9237.4 8798.6 8693.5 11169 9446.5 9421.2 10853 11902 11746 10692 10940 12317 11436 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167410000 3889 4656 3705 7197;7198;7199 5898 5898 1 9606 Homo sapiens -0.10077606805771211 DGNASGTTLLEALDCILPPTR Unmodified 2213.0998 0.099796984 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;Q9H2I7;A0A087WV01;Q504Z0;Q53HR1;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;Q16577;Q6P082;A0A4D5RAB8;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 7 0 1 65.579 65.604 3 9.4666E-23 20347 20230619_1887_Aki_TMTPro18x_K_F7 180.63 162.03 30443 28616 34589 31703 29347 29174 30331 35935 41978 40249 34411 37178 37617 39543 33571 39736 35651 38619 28207 26215 34686 31760 30908 29868 30912 36341 41824 40356 35818 37944 38154 40690 34359 39856 34111 36681 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 119510000 3890 1560;3997 3706 7200 5899;5900 5899 2 9606 Homo sapiens 0.041771077587327454 DGNASGTTLLEALDCILPPTRPTDK Unmodified 2654.3221 0.32214536 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;Q9H2I7;A0A087WV01;Q504Z0;Q53HR1;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;Q16577;Q6P082;A0A4D5RAB8;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 1 7 0.707 1 2 1 73.302 73.327 3;4 2.0735E-09 19912 20230619_1886_Aki_TMTPro18x_K_F6 119.29 100.75 2007500 1447900 1640900 1972100 1410200 1853600 1706200 1664300 2213100 2281800 2166200 2550600 2938800 2399500 1453100 3559800 3051300 3071600 1852100 1330500 1696100 1946100 1495200 1878200 1719100 1730700 2225500 2281700 2259000 2573100 2905400 2541000 1603600 3524500 2904200 2922600 5 5 4 5 4 5 4 4 5 5 5 5 5 5 4 5 5 5 15698000000 3891 1560;3997 3707 7201;7202;7203;7204 5901;5902;5903 5901 3 9606 Homo sapiens 0.06115717313468849 DGNASGTTLLEALDCILPPTRPTDKPLR Unmodified 3020.5601 0.56008422 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;Q9H2I7;A0A087WV01;Q504Z0;Q53HR1;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;Q6P082;A0A4D5RAB8;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 2 2 0 1 62.868 62.877 4 0.0022134 19818 20230619_1881_Aki_TMTPro18x_K_F2 68.942 58.137 25045 19612 27185 26644 24815 25350 27184 24485 27100 27254 22874 22422 29501 24126 29106 27066 24048 28257 23169 18015 27395 26314 25998 25716 27274 25161 27469 27254 23967 23039 29868 25000 29314 27226 23087 26810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5871599999.999999 3892 1560;3997 3708 7205 5904 5904 1 9606 Homo sapiens 0.130626581758861 DGNGYISAAELR Unmodified 1264.6048 0.60477922 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;Q9BRL5;Q96HY3;A0A590UJI2;G3V361 CALM3;CALM2;CALM1 yes no 0 0 0 3.5 1.12 1 1 1 1 46.881 46.95 2 1.409E-12 12729 20230619_1882_Aki_TMTPro18x_K_F3 211.63 157.67 711910 601360 670350 742080 656230 774090 792260 782280 823430 877120 942130 922790 951800 806430 985810 1009500 971170 1035400 658100 551670 684760 738300 686760 780430 792060 801230 842010 882560 961600 931080 972600 846490 1001200 1012500 929790 982910 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4324100000 3893 2325 3709 7206;7207;7208;7209 5905;5906 5905 2 9606 Homo sapiens -0.01693897684208423 DGNLASTLGQHK Unmodified 1239.6208 0.62076364 4477 Q9BZK7;C9JLJ1;B7Z475;A0A0D9SF63;A0A1B0GVH3 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes no 0 0 0 7 0 1 42.211 42.286 3 1.0757E-09 10190 20230619_1887_Aki_TMTPro18x_K_F7 172.57 105.19 136810 124250 134030 141050 167140 171380 152190 150540 157450 137400 147060 123700 128880 109780 130850 131850 155680 135520 126570 113860 136910 141480 170470 170590 154500 154870 159670 139190 150440 125820 132240 114890 134390 132350 148570 128750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185750000 3894 4477 3710 7210 5907 5907 1 9606 Homo sapiens 0.010538085527286967 DGNLHEGDIILK Unmodified 1322.683 0.68302954 184 Q9UDY2-7;Q9UDY2;A0A1B0GTW1;Q9UDY2-3;A0A3B3ITE1;A0A024R233;A0A2R8YDH4;A0A3B3IRI3;B7Z954;Q9UDY2-6;A0A3B3ISZ5;A0A024R225;B7Z2R3;A0A3B3IU51;A0A3B3ISF1;A0A3B3IRV6;Q9UDY2-2;Q9UDY2-4;Q9UDY2-5;A0A3B3IT83 TJP2 Tight junction protein ZO-2 yes no 0 0 0 4 0 1 47.845 47.885 3 0.0010476 13023 20230619_1883_Aki_TMTPro18x_K_F4 97.551 50.291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3895 184 3711 7211 5908 5908 1 9606 Homo sapiens 0.03459534901048755 DGNPDNETYLHR Unmodified 1429.6222 0.6222202 3102 Q9NUU7;I3L0H8;Q9UMR2;Q9UMR2-4;Q9UMR2-2;A0A0U4B4U6;F6QDS0;H3BQK0;Q53G16;Q7Z4W5;Q9HBZ9;Q2NL95;Q69YM2;I3L352;Q68DY7;B4DL69;A0A024QZ90;Q59FQ9;Q9UMR2-3;Q9NUU7-2 DDX19A;DDX19B;DKFZp762C1313;DKFZp686C21137;hCG_1998531 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B yes no 0 0 0 1.5 0.5 1 1 34.329 34.357 3 9.9158E-41 7415 20230619_1881_Aki_TMTPro18x_K_F2 257.19 237.59 76229 55855 63931 70773 76642 91386 72783 78706 124770 84582 98761 125570 121860 97942 84125 128180 129950 117700 70346 51282 66202 70499 78694 90529 75195 81434 123010 86508 103680 124660 121870 103500 88972 127600 123800 111950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 412110000 3896 3102 3712 7212;7213 5909;5910 5910 2 9606 Homo sapiens -0.07540602149197184 DGNVTCER Unmodified 949.39234 0.39234361 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 0 1 0 1 28.343 28.343 2 0.0025363 5349 20230619_1880_Aki_TMTPro18x_K_F1 125.16 104.46 12335 5300.2 21630 22049 27913 24327 17875 32997 18380 12409 30393 38251 17086 24689 25604 6331.7 36805 34354 11443 4995.1 21283 20896 28150 24597 18684 32527 19124 14402 30100 37153 18341 24918 26392 8292.3 35090 32341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13417000 3897 1426 3713 7214 5911 5911 1 9606 Homo sapiens -0.08437687295815977 DGPGETDAFGNSEGK Unmodified 1479.6114 0.61138074 3339 O94925-3;A8K132;O94925;Q53TX0;O94925-2 GLS Glutaminase kidney isoform, mitochondrial yes no 0 0 0 1.8 0.748 2 2 1 44.343 44.39 2;3 8.8067E-27 11849 20230619_1881_Aki_TMTPro18x_K_F2 212.55 198.81 121070 103970 127320 134550 151430 158190 150600 148160 190780 155510 154300 157230 173490 140190 151850 210400 183610 173480 112040 95418 129220 133660 155330 157950 153100 152250 190580 156910 160880 159090 175440 148860 156860 208050 175300 165200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 407920000 3898 3339 3714 7215;7216;7217;7218;7219 5912;5913 5913 2 9606 Homo sapiens -0.10924049314144213 DGPGFYTTR Unmodified 1012.4614 0.46140945 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 5 0.816 1 1 1 40.754 40.829 2 0.00031582 9822 20230619_1885_Aki_TMTPro18x_K_F5 155.07 111.94 745620 567890 679710 736140 940630 982310 908700 937430 1106900 874470 962270 970090 932790 840940 922670 1070700 1095700 1038800 688650 521440 700240 732720 955500 973570 923940 958760 1110000 890490 992930 976570 953100 883520 948770 1070100 1046300 987240 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1333600000 3899 2908 3715 7220;7221;7222 5914;5915 5914 2 9606 Homo sapiens -0.04432280004641598 DGPGNPLR Unmodified 824.41407 0.41406533 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 3.5 0.5 1 1 35.396 35.444 2 0.0041158 7721 20230619_1883_Aki_TMTPro18x_K_F4 117.4 91.572 65930 55266 68473 70423 79166 89950 73795 79306 106780 91603 100420 94835 100360 82611 84724 95519 118410 107610 60992 50718 69518 70122 81316 89220 75750 82051 106620 92064 103260 95730 101710 86338 88338 96425 112890 102120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176700000 3900 1601 3716 7223;7224 5916;5917 5917 2 9606 Homo sapiens -0.005165144849456738 DGPLGETVLECYNCGCR Unmodified 1998.8234 0.8233809 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A8A5YP40;A0A994J773;A0A8A5YP91;A0A8A5YQV3;A0A8A5YNF9;A0A8A5YNG5;A0A994J597;A0A8A5YPS5 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 4 0 1 55.846 55.855 3 2.8808E-09 16557 20230619_1883_Aki_TMTPro18x_K_F4 130.47 130.47 57742 44074 51383 62792 57431 72995 68026 60155 66613 74172 65661 63077 68291 55123 68948 76147 65997 70927 53322 40511 52907 61963 59531 72702 67906 62735 67964 73869 67532 64276 69621 58255 69980 75868 63208 67404 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114090000 3901 462 3717 7225 5918 5918 1 9606 Homo sapiens -0.13607785281465112 DGPLNMILDDGGDLTNLIHTK Unmodified 2251.1154 0.11544705 1439 A0A384MTQ3;P23526;P23526-2 AHCY Adenosylhomocysteinase yes no 0 0 0 5 0 1 64.526 64.57 3 0.05796 19972 20230619_1885_Aki_TMTPro18x_K_F5 48.229 38.698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3902 1439 3718 7226 5919 5919 1 9606 Homo sapiens 0.03993394275812534 DGPNALTPPPTTPEWIK Unmodified 1832.9309 0.93086439 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2;Q5TC01;Q5TC02 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 6.5 0.5 1 1 59.634 59.688 3 2.1402E-06 17970 20230619_1886_Aki_TMTPro18x_K_F6 109.22 89.385 37165 33029 34757 40171 37361 43108 50406 45303 50684 55623 41809 48524 55253 41864 46453 65110 60780 61675 34366 30290 35594 40022 38956 43417 50045 46410 51329 55431 43955 49348 55538 44662 48284 64797 58021 58612 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 362200000 3903 3387 3719 7227;7228 5920 5920 1 9606 Homo sapiens 0.04771618978179504 DGPPHQVLVVPLHSR Unmodified 1649.9002 0.90017338 3961 Q2NL82;I3L1Q5 TSR1 Pre-rRNA-processing protein TSR1 homolog yes no 0 0 0 8 0 1 40.821 40.814 4 1.3315E-10 9817 20230619_1888_Aki_TMTPro18x_K_F8 158.91 151.86 30792 23552 24241 26407 31410 36236 30390 31905 41313 33124 32462 26975 34830 25184 32725 34062 34441 33684 28411 21595 25293 26565 32081 35796 31029 32907 41103 33248 33788 27629 35348 26536 33415 34059 32931 32000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89501000 3904 3961 3720 7229 5921 5921 1 9606 Homo sapiens 0.10121930174454974 DGPSLLVVEQVR Unmodified 1310.7194 0.71941505 4224 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 4 0 1 54.934 54.946 2 0.00047478 16187 20230619_1883_Aki_TMTPro18x_K_F4 106.62 79.315 97517 88011 102150 109760 107990 114040 113650 117170 132180 115740 117380 97405 103720 98553 124910 115330 116880 120520 90265 80728 103510 109120 111820 115080 114850 119440 132980 116530 120450 99842 107370 102500 126150 115960 111930 114400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61558000 3905 4224 3721 7230 5922 5922 1 9606 Homo sapiens 0.07648411797754306 DGPVRPQNAEEEK Unmodified 1467.6954 0.69538514 736 A2AAT0;B4DZZ8;A0A8V8TNV9;B4DVK8;A0A8V8TM21;A0A1U9X8L9;A0A1U9X8K3;A0A1U9X8J5;A0A024RCX7;Q92504 SLC39A7 Zinc transporter SLC39A7 yes no 0 0 1 2 0.816 1 1 1 34.748 34.787 3 0.0017384 7586 20230619_1881_Aki_TMTPro18x_K_F2 81.656 54.558 192620 114950 185450 221420 341930 398500 292410 338140 475480 260030 356370 461630 336710 349170 269450 263360 500050 505200 177750 106210 191630 216870 342000 387790 303160 347290 468460 273540 370910 455190 341830 359290 287840 279590 476250 477260 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 156090000 3906 736 3722 7231;7232;7233 5923;5924 5924 2 9606 Homo sapiens -0.019754734265688967 DGQAMLWDLNEGK Oxidation (M) 1491.6664 0.6663932 2907 P63244;E9KL35;J3KPE3;H0Y8W2;D6RAC2;H0YAF8;D6REE5;H0YAM7;D6R9L0;D6R9Z1;D6RFX4;H0Y8R5 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 1 0 3.5 1.12 1 1 1 1 55.709 55.743 3 4.6012E-06 16499 20230619_1883_Aki_TMTPro18x_K_F4 122.15 99.817 687970 608830 684410 697540 687240 734230 723580 719270 821870 907540 758080 727550 810780 688950 758160 880160 749260 815950 636450 558030 695610 697880 714480 739620 730660 740770 830100 901520 782960 745390 823290 722190 772100 877470 717440 775430 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 968820000 3907 2907 3723 7234;7235;7236;7237 5925;5926;5927;5928;5929 5928 1725 5 9606 Homo sapiens -0.05977334047224758 DGQAMLWDLNEGK Unmodified 1475.6715 0.67147858 2907 P63244;E9KL35;J3KPE3;H0Y8W2;D6RAC2;H0YAF8;D6REE5;H0YAM7;D6R9L0;D6R9Z1;D6RFX4;H0Y8R5 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 4 1.41 1 1 1 1 1 60.367 60.398 3 3.6532E-12 18032 20230619_1885_Aki_TMTPro18x_K_F5 167.73 148.91 250190 206020 232130 237210 218800 256420 249580 252750 268080 272500 280950 270780 303370 259110 257290 342590 308710 282150 231220 188890 237150 237330 229310 257770 250520 258980 272640 274290 288540 274780 306770 271980 265750 339310 294690 268720 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1823899999.9999998 3908 2907 3723 7238;7239;7240;7241;7242 5930;5931;5932 5932 3 9606 Homo sapiens -0.04733030184615927 DGQILPVPNVVVR Unmodified 1404.8089 0.80889876 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 5.33 3.09 1 1 1 57.771 57.806 2;3 1.3054E-05 17605 20230619_1880_Aki_TMTPro18x_K_F1 161.67 111.55 850270 755960 829740 850080 683610 889160 815660 768550 1231100 984280 892100 890950 1106400 881550 862760 1174800 1041700 1008800 786490 692750 842620 851470 727090 893360 827450 799500 1216800 981310 940280 908720 1110700 925300 893180 1165700 994710 960020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1015399999.9999999 3909 617 3724 7243;7244;7245 5933;5934 5933 2 9606 Homo sapiens 0.12268666477098122 DGQLIYTPFTEDTETVGQR Unmodified 2169.0226 0.022592521 388 G3V3Z0;G3V2G7;A0A024R6A3;A0A218KGN3;A0A218KGN4;A0A218KGN7;A0A218KGP0;A0A218KGP1;A0A218KGQ3;A0A218KGQ6;Q53FV8;A0A0S2Z4D2;A0A8V8TPK5;A0A8V8TQ90;G3V4M0;A0A8V8TQ36;A0A8V8TQV2;A0A8V8TQT3;A0A8V8TPL5;A0A8V8TPL0;A0A8V8TLT5;A0A8V8TQ93;A0A8V8TR50;A0A8V8TR52;A0A8V8TQ53;A0A8V8TQ54;P49768-4;P49768-6;P49768;P49768-2;P49768-5;P49768-7;P49768-3 PSEN1 Presenilin;Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12 yes no 0 0 0 3.5 0.5 1 1 60.649 60.665 3 0.0049618 18662 20230619_1882_Aki_TMTPro18x_K_F3 65.855 56.592 12945 8879.5 8144.5 10762 11406 12231 11287 10592 14279 13808 14599 13794 14645 9730.7 11082 13908 14352 18338 11921 8151.2 8737 10729 11601 12222 11475 11023 14391 13783 14953 13867 14760 10414 11529 14144 13728 17356 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28910000 3910 388 3725 7246;7247 5935 5935 1 9606 Homo sapiens -0.015157871860083105 DGQPCMDHDR Oxidation (M) 1245.4503 0.45026919 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRU9 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 1 0 1 0 1 24.825 24.825 3 0.0062363 4180 20230619_1880_Aki_TMTPro18x_K_F1 69.786 61.273 4424.8 1344.5 5780.9 4283.7 5609.3 5904.7 5061.5 5745.6 5878 3869.6 6427.1 6974.9 7285.7 6856.5 7347.8 2510 7696.3 8215.5 4085.8 1261 5746.9 4103.3 5820.3 5837.8 5166.3 5828.7 5954.8 4109.8 6611.5 6929.2 7414.8 6851.2 7462 2928.1 7364 7740.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5736900 3911 1603 3726 7248 5936 5936 1044 1 9606 Homo sapiens -0.16263793432744933 DGQPCMDHDR Unmodified 1229.4554 0.45535457 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRU9 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 1 0 1 27.108 27.108 3 4.3575E-07 4896 20230619_1880_Aki_TMTPro18x_K_F1 171.74 153 13758 4541.1 18384 17096 18732 21791 15091 18867 17876 14584 23110 28519 22132 21855 24652 11887 27941 28530 12709 4275.4 18285 16269 19333 21580 15540 19359 18243 15394 23466 28059 22759 22239 25132 13081 26706 26919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44487000 3912 1603 3726 7249 5937 5937 1 9606 Homo sapiens -0.15019489570113365 DGQVINETSQHHDDLE Unmodified 1835.7922 0.79219865 3414 P08670;V9HWE1;Q53HU8 VIM;HEL113 Vimentin yes no 0 0 0 1.5 0.5 1 1 37.976 38.008 3 4.1583E-08 8894 20230619_1881_Aki_TMTPro18x_K_F2 127.29 122.48 133110 102400 136030 112600 250640 233180 205520 197010 199820 187750 201500 212300 219770 167570 184540 211420 241260 247100 123060 93868 139510 114510 249640 225920 209570 203370 204060 191000 207530 212900 221970 176780 191540 213650 230330 234300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1245300000 3913 3414 3727 7250;7251 5938;5939 5939 2 9606 Homo sapiens -0.09226575728075659 DGQYILATGTYKPR Unmodified 1581.8151 0.81510635 1794 A0A8Q3SHT1;A0A8Q3SHX7;Q9BSC4;A0A8Q3SHW5;B4DS83;Q9BSC4-2;A0A8Q3SHT6;A0A8Q3SHT2;A0A8Q3SHZ5;A0A8Q3SIR1;A0A8Q3SHS4 NOL10 Nucleolar protein 10 yes no 0 0 1 2 0 1 48.11 48.181 3 5.1212E-05 13593 20230619_1881_Aki_TMTPro18x_K_F2 105.19 86.445 166150 129990 176550 185320 174320 201210 194540 169400 185000 198680 212090 204160 235490 164170 210390 222850 214190 202840 153680 119470 178510 182740 181750 201470 194700 176160 190180 199370 217320 205720 238130 173900 214650 221850 204820 192910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127790000 3914 1794 3728 7252 5940 5940 1 9606 Homo sapiens 0.04747139917981258 DGRPLQPHVR Unmodified 1173.6367 0.63668847 4548 Q9HC35;B5MBZ0;Q9HC35-2;B6EXY3;C1PHA1;J7MA22;C1PHA0 EML4;EML4-ALK variant 7;EML4-ALK;EML4-ALK variant 6 Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 1 7 0.816 1 1 1 25.91 25.964 3 3.0337E-05 4749 20230619_1888_Aki_TMTPro18x_K_F8 137.98 100.63 146050 94051 162340 157630 205750 172660 158950 182830 159520 136380 191810 195540 156140 137070 181440 127000 192680 160750 135000 86687 164080 154120 208520 173730 163160 184800 163660 142050 193810 193810 161710 142760 184350 129880 184020 152440 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 72729000 3915 4548 3729 7253;7254;7255 5941;5942;5943;5944 5944 4 9606 Homo sapiens 0.05681559580261819 DGRPTELGGCTAIVR Unmodified 1600.7991 0.79913871 2220 B4DVH1;B4E308;B4DI83;B2R5N4;Q9H0V9-3;Q9H0V9;Q9H0V9-2 LMAN2L VIP36-like protein yes no 0 0 1 6 0 1 39.616 39.704 3 2.3283E-05 9415 20230619_1886_Aki_TMTPro18x_K_F6 107.46 72.421 87299 64690 91209 89927 86815 109470 102480 100430 109820 85027 91728 85307 102880 75502 92193 119330 113020 86174 80705 59450 92279 88985 91032 108930 102650 102810 110670 86812 95418 86389 104090 80522 95225 117280 107750 82298 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93129000 3916 2220 3730 7256 5945 5945 1 9606 Homo sapiens 0.02277110409454508 DGSAFEDGLR Unmodified 1065.4727 0.47270242 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;Q59EC0 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 1.5 0.5 1 1 44.546 44.587 2 2.1333E-09 11977 20230619_1881_Aki_TMTPro18x_K_F2 200.86 149.51 336270 282740 300270 330750 330460 357530 372910 362790 493160 411770 426290 431810 451690 379500 392650 465900 469380 500500 310720 259240 308680 330490 342220 359700 377120 371590 492710 414330 441600 435730 457460 397850 404960 468500 448570 474900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 602190000 3917 1718;4020 3731 7257;7258 5946;5947 5947 2 9606 Homo sapiens -0.0574150270113023 DGSAFEDGLRHPFIVNHPK Unmodified 2135.0548 0.054836123 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;Q59EC0 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 1 7.5 0.5 1 1 46.932 47 5 0.031675 12324 20230619_1888_Aki_TMTPro18x_K_F8 51.819 32.744 19685 18478 16925 16569 21284 20981 18717 21142 21766 17840 18146 20025 21260 20041 22874 20428 20560 21676 18198 16899 17481 16968 21685 20905 19122 21488 21857 18280 18946 20230 21689 20685 23090 20603 19702 20571 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47000000 3918 1718;4020 3732 7259;7260 5948 5948 1 9606 Homo sapiens 0.03271089798363391 DGSAVEIVGLSK Unmodified 1173.6241 0.62411768 1056 A0A0S2A4E4;A0A0M4G3H8;P35573-2;P35573-3;P35573 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes no 0 0 0 5 0 1 55.191 55.258 3 0.0099215 15941 20230619_1885_Aki_TMTPro18x_K_F5 54.343 31.765 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3919 1056 3733 7261 5949 5949 1 9606 Homo sapiens 0.04425058606716448 DGSCGVAYVVQEPGDYEVSVK Unmodified 2257.0209 0.020877961 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91;H0Y5C6 FLNA;FLJ00119 Filamin-A yes no 0 0 0 4.67 0.471 1 2 57.865 57.905 3;4 1.0808E-16 17448 20230619_1883_Aki_TMTPro18x_K_F4 162.42 147.33 77505 63709 73581 82018 80066 92714 89621 89145 95823 93125 90841 97177 103520 85276 107050 99189 96788 108110 71639 58476 75233 81453 82944 92839 89999 91423 97100 94026 94073 98045 105380 89123 108180 99981 92784 102550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 124620000 3920 3484 3734 7262;7263;7264 5950;5951;5952 5950 3 9606 Homo sapiens -0.057351642662069935 DGSDYEGWCWPGSAGYPDFTNPTMR Oxidation (M) 2881.1384 0.13844369 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 1 0 5.5 0.5 1 1 63.076 63.123 3 3.0023E-05 19535 20230619_1886_Aki_TMTPro18x_K_F6 73.446 73.443 50991 41378 43227 51339 39329 55369 43836 48166 49776 62608 51882 53928 59046 54146 60436 67592 54653 59871 47088 37967 44557 51067 41404 55491 44151 50077 50545 62224 53477 55142 60120 56537 61154 67259 52383 56929 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 90546000 3921 3900;2497 3735 7265;7266 5953;5954 5954 1527 2 9606 Homo sapiens -0.2268799945968567 DGSEASLEWSSER Unmodified 1451.6165 0.61646612 558 A0A024R972;P11047 LAMC1 Laminin subunit gamma-1 yes no 0 0 0 1 0 1 45.462 45.462 2 0.0058029 12508 20230619_1880_Aki_TMTPro18x_K_F1 76.927 48.184 18675 14233 14638 16462 16731 21866 21657 19898 22943 22488 19341 22485 26990 20546 20675 27065 24065 24622 17230 13054 15257 16513 17380 21648 21577 20531 23171 22592 20368 22757 26992 21611 21357 26938 22996 23410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39369000 3922 558 3736 7267 5955 5955 1 9606 Homo sapiens -0.09127745451542069 DGSEAYRPGTTQR Unmodified 1436.6644 0.66441937 1671 A0A7I2YQC1;A0A7I2V550;X5DNR8;B4DIB3;Q9P0L2-2;Q9P0L2-3;Q9P0L2;X5D7J4 MARK1 Serine/threonine-protein kinase MARK1 yes no 0 0 1 3.5 0.5 1 1 29.049 29.135 3 0.0021545 5315 20230619_1882_Aki_TMTPro18x_K_F3 77.597 54.876 11709 7440.9 11458 13259 15885 16011 15153 14846 19379 16466 19852 15782 16105 16222 13419 12769 18018 17740 10810 6864.7 11737 12936 16124 15949 15447 15288 19507 16545 20147 16072 16447 16536 13942 13171 17193 16798 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 24140000 3923 1671 3737 7268;7269 5956;5957 5956 2 9606 Homo sapiens -0.036446267408109634 DGSELILHFVTQCNTR Unmodified 1888.9101 0.91014572 412 H3BNT2;A0A024R6U3;O75208;B4DIV2;H3BSJ5;H3BPY0;B4DEE3;H3BPC6;B4E0U3 COQ9;hCG_2025883 Ubiquinone biosynthesis protein COQ9, mitochondrial yes no 0 0 0 8 0 1 60.246 60.283 3 1.2198E-28 17891 20230619_1888_Aki_TMTPro18x_K_F8 216.01 206.35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3924 412 3738 7270 5958 5958 1 9606 Homo sapiens 0.0012470532685711078 DGSGGASGTLQPSSGGGSSNSR Unmodified 1921.8362 0.83618873 4632 Q9NYV4-2;Q9NYV4;J3QSD7;Q9NYV4-3 CDK12 Cyclin-dependent kinase 12 yes no 0 0 0 3.5 0.5 1 1 31.86 31.921 3 3.0332E-12 6293 20230619_1883_Aki_TMTPro18x_K_F4 131.3 120.44 3291.2 934.85 3419.6 4393.4 5184.9 6968 3983.9 5659.5 7769.8 4830.7 7685.9 4513.7 6032 4310.2 5276.5 4246.3 6251.7 4607.4 3031.9 869.76 3496.7 4175.6 5231.6 6808.1 4205.9 5842.3 7682 4924.6 7791.5 4602 6167.1 4454.6 5426.2 4292.5 5960.8 4378.3 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6963500 3925 4632 3739 7271;7272 5959;5960;5961 5960 3 9606 Homo sapiens -0.0878559130173926 DGSLANNPYPGDVTK Unmodified 1546.7264 0.72635092 1744 B4DRB6;B4DH66;B4DZ54;A0A8C8MQ70;A0A8C8KGQ8;Q5T6F2;B3KQ73;B4E0R5;Q5T6F2-2 UBAP2 Ubiquitin-associated protein 2 yes no 0 0 0 5 0 1 48.105 48.181 3 0.00021255 12967 20230619_1885_Aki_TMTPro18x_K_F5 102.63 94.906 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3926 1744 3740 7273 5962 5962 1 9606 Homo sapiens -0.025143201123682957 DGSLASNPYSGDLTK Unmodified 1523.7104 0.71036651 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;H0Y5H6;H7C2T8;Q14157-1;Q14157-4;B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like no no 0 0 0 5 0 1 50.89 50.965 2 1.0188E-32 14159 20230619_1885_Aki_TMTPro18x_K_F5 249.75 208.21 44811 35504 38429 47353 40075 47402 44805 49238 51158 59132 44927 51600 64802 44765 51862 67831 59566 59485 41378 32605 39650 46834 41669 47957 45109 50423 51601 58978 47302 52483 64833 47666 53477 67273 56917 56588 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102320000 3927 3877;3878 3741 7274 5963 5963 1 9606 Homo sapiens -0.030540263492412123 DGSLEDDEDEEDDLDEGVGGK Unmodified 2236.8615 0.86151959 3821 Q6AWA4;Q12789;Q6AHZ7;Q12789-3 DKFZp686O0870;GTF3C1;DKFZp686A111 General transcription factor 3C polypeptide 1 yes no 0 0 0 1 0 1 52.762 52.762 3 5.3441E-23 15509 20230619_1880_Aki_TMTPro18x_K_F1 135.27 134.33 19533 14005 19984 17282 18270 20609 21050 20971 22501 25658 23007 20155 27643 17901 22393 28548 21630 25252 18051 12856 20221 17238 19188 20596 21115 21515 22887 25504 23762 20652 27774 19131 22857 28311 20728 24007 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232320000 3928 3821 3742 7275 5964 5964 1 9606 Homo sapiens -0.20743670871161157 DGSLEVTGQLGEVMK Unmodified 1561.7658 0.76577289 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0;K7ERR6 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 4.5 0.5 1 1 58.427 58.457 3 0.0079752 17289 20230619_1885_Aki_TMTPro18x_K_F5 66.568 45.615 42355 37600 37947 38770 35546 40171 42006 39897 46287 47271 43625 47408 53125 36527 42369 54142 63611 57993 39151 34430 38884 39102 37305 40528 42114 40983 46835 47374 45320 47748 53376 39019 44505 54295 60618 55062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218390000 3929 2417 3743 7276;7277 5965 5965 1 9606 Homo sapiens 0.007360638468526304 DGSLIVSSSYDGLCR Unmodified 1627.7512 0.75118546 3700 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 5.5 0.5 1 1 53.663 53.737 3 1.4551E-07 15336 20230619_1885_Aki_TMTPro18x_K_F5 123.36 105.26 59153 52286 71089 66515 59249 72961 72644 62260 82710 63718 71954 72575 84360 62386 71603 75987 75472 71114 54816 47973 71029 66094 62870 73025 72775 64432 83197 64639 74876 72951 85036 65436 73269 75864 72144 67612 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 228120000 3930 3700 3744 7278;7279 5966;5967 5966 2 9606 Homo sapiens -0.03758008301247173 DGSPIADDLLEK Unmodified 1271.6245 0.62451161 2141 A8K9T8;Q9BYT8;B3KU23;E9PCB6;H0YAK4;Q96K48;Q8NDD9;H0YAF7 NLN;DKFZp564F123 Neurolysin, mitochondrial yes no 0 0 0 2 0.816 1 1 1 58.292 58.306 3 0.00092718 17733 20230619_1882_Aki_TMTPro18x_K_F3 89.193 54.498 65971 49784 62841 65456 57229 77149 71652 70767 78019 85502 83406 78240 85884 71225 81807 100910 84553 90424 60948 45721 64050 64961 60392 76934 71621 73119 79377 85393 85403 79571 87368 75274 83522 100280 80914 85975 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 269280000 3931 2141 3745 7280;7281;7282 5968 5968 1 9606 Homo sapiens -0.0004356646409178211 DGSSGGVIR Unmodified 846.41954 0.41954463 3516 Q6IAT9;P28072 PSMB6 Proteasome subunit beta type;Proteasome subunit beta type-6 yes no 0 0 0 2.5 0.5 1 1 31.271 31.346 2 0.019747 6125 20230619_1882_Aki_TMTPro18x_K_F3 72.23 49.193 14024 6694.9 18053 17580 20638 26155 17697 23306 87673 13301 23173 25972 21759 22140 23540 10683 23676 26690 12965 6228.5 18042 16949 21327 25694 20112 23723 82495 14546 26735 25643 22393 22358 23841 11861 22673 25170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18154000 3932 3516 3746 7283;7284 5969 5969 1 9606 Homo sapiens -0.009808356931330309 DGSVAIASKPR Unmodified 1099.5986 0.59857163 76 A0A024R040;P55809;Q6IAV5;A1E286 OXCT1;OXCT Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes no 0 0 1 4.5 3.5 1 1 37.91 37.903 3 3.8068E-06 8648 20230619_1888_Aki_TMTPro18x_K_F8 147.58 121.46 207310 143320 208010 242470 299560 267730 282510 273030 295080 233050 292380 220110 230120 173180 280460 136490 197710 149090 191520 132080 212780 236870 302900 268940 286150 277510 299510 237330 297010 222520 238930 178390 278920 138990 189630 141660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171670000 3933 76 3747 7285;7286 5970;5971 5971 2 9606 Homo sapiens 0.052756288749378655 DGTAGSHFMASPQCVGYSR Oxidation (M) 2042.8575 0.85745822 2596 B4DUV4;B4DZS3;Q9H488 POFUT1 GDP-fucose protein O-fucosyltransferase 1 yes no 0 1 0 6.5 0.5 1 1 38.861 38.934 3 4.1824E-11 8805 20230619_1887_Aki_TMTPro18x_K_F7 142.35 136.03 19926 14882 20035 19693 21743 18477 20481 20434 22090 22547 25648 21292 25640 20430 20703 25028 22756 28340 18416 13669 20358 19482 22371 18836 20785 20799 22560 22633 26112 21666 25922 21361 21279 25247 21791 26862 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54377000 3934 2596 3748 7287;7288 5972;5973 5973 1567 2 9606 Homo sapiens -0.122256207982673 DGTAGSHFMASPQCVGYSR Unmodified 2026.8625 0.8625436 2596 B4DUV4;B4DZS3;Q9H488 POFUT1 GDP-fucose protein O-fucosyltransferase 1 yes no 0 0 0 7.5 0.5 1 1 42.474 42.513 3 5.0512E-20 10287 20230619_1887_Aki_TMTPro18x_K_F7 188.96 183.65 10670 10767 12168 9936.9 10666 10298 11318 13055 12921 12509 12750 12475 13971 12215 11223 15099 16381 16651 9892.5 9846.9 12197 10127 11201 10461 11435 13124 13068 12667 13138 12665 14098 12764 11766 15201 15625 15798 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39652000 3935 2596 3748 7289;7290 5974 5974 1 9606 Homo sapiens -0.1098131693565847 DGTFDPDNLEK Unmodified 1249.5463 0.54626129 4209 Q8IXM3 MRPL41 39S ribosomal protein L41, mitochondrial yes yes 0 0 0 2.5 0.5 1 1 51.865 51.917 2 0.00022099 15295 20230619_1881_Aki_TMTPro18x_K_F2 127.42 87.715 37376 31928 32623 37350 38901 47787 40982 45292 52143 45432 48333 40165 42506 37113 36259 49215 45632 43646 34534 29273 33666 37411 40034 47461 41548 46418 52312 45763 49445 40956 43287 39017 37571 48912 43556 41521 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45416000 3936 4209 3749 7291;7292 5975 5975 1 9606 Homo sapiens -0.06852999049351638 DGTGVVEFVR Unmodified 1077.5455 0.54547343 3140 J3KTL2;Q07955;Q59FA2;Q07955-3;Q07955-2;J3KSR8;A0A2I7N9Y9;B7Z570 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 3.5 0.5 1 1 48.851 48.909 2 1.8539E-09 13644 20230619_1882_Aki_TMTPro18x_K_F3 203.19 148.64 2103500 1819900 1945000 2250800 2134000 2556800 2363000 2389900 2703700 2763100 2730500 2427500 2942000 2274500 2627900 2949600 2687000 2877900 1944600 1669400 1994100 2241300 2210000 2557900 2379900 2462600 2737300 2762400 2807400 2475900 2979300 2388400 2682900 2948200 2571700 2733500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2580900000 3937 3140 3750 7293;7294 5976;5977;5978 5976 3 9606 Homo sapiens 0.009802510922781948 DGTISEDTIR Unmodified 1105.5251 0.52513192 4407 Q99816;F5H442;Q99816-2;D3DQY6 TSG101 Tumor susceptibility gene 101 protein yes no 0 0 0 1 0 1 39.822 39.822 2 2.9474E-19 10007 20230619_1880_Aki_TMTPro18x_K_F1 254.82 189.79 130700 96073 100660 117830 136250 151010 134280 132050 195300 137560 170560 172400 170550 152700 154860 184480 211340 192820 120540 88177 105400 117620 138850 149750 137320 136370 194290 139940 176140 172860 173460 159790 161020 185250 201530 183120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92650000 3938 4407 3751 7295 5979 5979 1 9606 Homo sapiens -0.02340964358177189 DGTQCLSGSSDGTIR Unmodified 1552.6787 0.6787488 204 A0A024R2L1;Q8TAF3-4;Q8TAF3-3;Q8TAF3 WDR48 WD repeat-containing protein 48 yes no 0 0 0 3 0 1 38.593 38.646 2 3.2292E-07 9029 20230619_1882_Aki_TMTPro18x_K_F3 131.69 115.06 8775.9 7118.8 7710.6 10468 9722.9 8991.1 10723 9285.6 12559 10065 10733 9943.8 10767 7219.6 10448 13868 13468 8264.5 8106.2 6544.1 7967.4 10270 9956.8 9212.9 10803 9495.2 12610 10130 11095 10021 10965 7887.6 10814 13506 12821 7928.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16704000 3939 204 3752 7296 5980 5980 1 9606 Homo sapiens -0.07548342374843742 DGTVLCELINALYPEGQAPVK Unmodified 2286.1566 0.15658358 1438 A0A384MTL2;P37802;P37802-2;X6RJP6 TAGLN2 Transgelin-2 yes no 0 0 0 7 0.816 1 1 1 66.887 66.916 3 1.8797E-16 20664 20230619_1888_Aki_TMTPro18x_K_F8 156.83 142.14 25114 17874 21341 22433 15222 18793 27059 25335 23823 30574 25854 24564 33654 21975 20946 43481 30035 34851 23174 16411 21915 22243 16622 19426 26497 25572 24570 30412 26752 25161 33460 23915 22153 42787 28683 33175 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174170000 3940 1438 3753 7297;7298;7299 5981;5982 5982 2 9606 Homo sapiens 0.06495155315269585 DGVGAVMDSMELER Unmodified 1507.6647 0.66467864 2867;2868 E5KND5;Q96RP9;Q96RP9-2;C9IZ01;D3DNL3;F8WAU4;A0A0S2Z5W5;C9JA25;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 0 2 0 1 57.99 58.005 3 0.0067174 17798 20230619_1881_Aki_TMTPro18x_K_F2 68.413 57.468 34326 33910 36360 34444 32455 38804 34213 34578 41602 36846 34965 28580 35238 27329 39328 37128 35444 31817 31797 31036 36696 34822 34096 38823 34637 35673 41696 36881 36168 29375 36131 28764 39692 36865 33925 30289 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21504000 3941 2867;2868 3754 7300 5983 5983 1 9606 Homo sapiens -0.06884711127440823 DGVGGLPTFLENSFIGSAR Unmodified 1935.969 0.96904081 1193 B4DIZ6;A0A140VJQ3;Q96DE0-3;Q96DE0 NUDT16 U8 snoRNA-decapping enzyme yes no 0 0 0 5.33 3.09 1 1 1 64.537 64.554 3 6.4237E-15 19775 20230619_1888_Aki_TMTPro18x_K_F8 162.49 150.22 53650 47810 49980 56100 45358 60895 54773 55416 62249 72548 66180 56529 72236 57413 55930 78358 63789 67600 49608 43829 51058 56037 47833 61071 54929 57439 63213 71909 67897 58190 72730 60323 57722 77735 60983 64306 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 148970000 3942 1193 3755 7301;7302;7303 5984;5985 5985 2 9606 Homo sapiens 0.03849504892832556 DGVGMVEYLR Unmodified 1137.5488 0.54884425 3844 Q13242;A8K3M9;H0YIB4 SRSF9 Serine/arginine-rich splicing factor 9 yes no 0 0 0 4.5 0.5 1 1 53.369 53.414 2 0.00087953 15221 20230619_1885_Aki_TMTPro18x_K_F5 115.82 78.266 245910 195400 208480 242520 196640 253500 224160 232770 317810 299380 274580 276250 294150 223460 263890 285840 298740 331000 227060 179300 214950 241150 206490 254960 227320 241000 316790 298350 284570 279600 298020 235790 270930 288670 285720 313790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 248480000 3943 3844 3756 7304;7305 5986 5986 1 9606 Homo sapiens -0.014428221253865559 DGVIEASINHEK Unmodified 1310.6466 0.64664404 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O43242-2;O95325 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 3 0.816 1 1 1 43.9 43.965 3 2.3614E-05 11394 20230619_1882_Aki_TMTPro18x_K_F3 121.21 80.326 66271 62411 72136 70282 82570 93871 81683 86205 82804 90481 92203 95573 85293 68930 82270 84223 86297 96896 61382 57182 72942 70664 84906 92960 82480 88672 84721 91326 93886 95850 87094 72827 83949 85094 82602 91859 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 258550000 3944 2361 3757 7306;7307;7308 5987 5987 1 9606 Homo sapiens 0.0037465800432983087 DGVLEEQIER Unmodified 1186.583 0.58298115 133 A0A024R179;Q09161;X6R941 NCBP1 Nuclear cap-binding protein subunit 1 yes no 0 0 0 1 0 1 45.998 45.998 2 1.2003E-09 12675 20230619_1880_Aki_TMTPro18x_K_F1 208.63 150.4 161590 124400 143240 167540 167620 180370 171890 181270 216490 196720 188000 199660 220680 173080 170500 230320 206270 209390 149230 114260 147540 165770 172370 181420 174440 185500 216930 198110 195680 201680 221750 182480 176560 229180 197030 199090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 338750000 3945 133 3758 7309 5988 5988 1 9606 Homo sapiens -0.002847024327593317 DGVLTLANNVTPAK Unmodified 1411.7671 0.76709352 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;B4DM10 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 0 1 0 1 55.913 55.913 3 8.9488E-06 16873 20230619_1880_Aki_TMTPro18x_K_F1 117.92 78.65 50968 39776 47312 45990 45808 50287 44592 50257 59428 53714 52705 55280 59125 46635 56081 58827 56427 60626 47087 36477 48325 46012 47703 50534 45520 51420 59442 54154 54692 55752 59971 49056 57115 59013 54014 57549 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216420000 3946 2902 3759 7310 5989 5989 1 9606 Homo sapiens 0.07768065997925078 DGVLVDEFGLPQIPAS Unmodified 1655.8407 0.8406524 4635 Q9NZZ3 CHMP5 Charged multivesicular body protein 5 yes yes 0 0 0 3.2 1.17 2 1 1 1 66.178 66.199 2;3 1.0933E-05 20867 20230619_1883_Aki_TMTPro18x_K_F4 101.3 86.513 25955 22833 26633 29595 23888 28689 32875 30391 37005 28938 33184 31564 39968 34606 29461 42631 41980 45340 24016 20953 26983 29319 25286 29110 32745 30905 37280 29427 34503 32069 40097 36024 30907 42819 40068 43023 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 69208000 3947 4635 3760 7311;7312;7313;7314;7315 5990;5991;5992;5993 5992 4 9606 Homo sapiens 0.038965696497825775 DGVTVAK Unmodified 688.37555 0.37555455 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;Q53SE2;E7ESH4;E7EXB4;A0A0S2Z415;P10809-2;C9JL25;C9JCQ4;C9JL19 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 4.5 0.5 1 1 39.706 39.772 2 0.0070992 9438 20230619_1883_Aki_TMTPro18x_K_F4 127.84 39.109 141690 72032 214410 215180 388390 336680 247800 381000 240820 121580 286870 327990 175710 230700 298950 76100 311130 272740 131270 67182 214250 206920 384900 332050 258180 378780 246990 142960 287810 320120 189250 232750 301220 90747 297300 257110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 191160000 3948 272 3761 7316;7317 5994;5995 5994 2 9606 Homo sapiens 0.018901798805245562 DGVTVAVISGEALGIK Unmodified 1527.8508 0.85082315 698 A0A024RBX6;O00625 PIR Pirin yes no 0 0 0 7 0 1 62.792 62.827 3 0.022369 19119 20230619_1887_Aki_TMTPro18x_K_F7 51.727 37.037 80300 70000 87338 99141 76272 80216 103110 93654 89254 84504 93493 99846 116430 88683 104510 121040 98743 106260 74335 64304 88050 97461 80703 82849 101980 94585 91871 86339 96801 100360 117450 93568 106260 120240 94585 101060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 524040000 3949 698 3762 7318 5996 5996 1 9606 Homo sapiens 0.10801177375014959 DGVVEITGK Unmodified 916.48656 0.48656157 3383 V9HW43;P04792;A0A6Q8PFK8;A0A6Q8PHJ6;B4DL87 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 0 0 0 4 1 1 1 48 48.079 2;3 0.00097889 13281 20230619_1882_Aki_TMTPro18x_K_F3 131.44 74.876 124720 87448 105720 120960 143510 188180 135380 141370 241880 207170 205840 231460 285320 217970 170750 296930 286200 263990 115080 80380 109680 120190 146370 184000 140180 149340 238970 206780 216350 233470 283200 229500 182690 294890 272570 251170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186300000 3950 3383 3763 7319;7320 5997;5998 5997 2 9606 Homo sapiens 0.024977747979505693 DGVVEITGKHEER Unmodified 1467.7318 0.73177065 3383 V9HW43;P04792;A0A6Q8PFK8;A0A6Q8PHJ6;B4DL87 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 0 0 1 3 0 1 37.818 37.872 4 0.00021669 8703 20230619_1882_Aki_TMTPro18x_K_F3 103.67 84.349 102420 95052 107350 117060 124690 112120 113990 126000 115750 160330 151880 132010 151060 110000 132700 161000 145740 82484 94818 87168 108920 116370 127620 114150 115700 128630 119500 159200 153940 134620 153190 116860 136120 156530 138880 79408 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 346760000 3951 3383 3764 7321 5999 5999 1 9606 Homo sapiens 0.01661403470143341 DGVVFGVEK Unmodified 948.49165 0.49164694 1225 Q6IB71;A0A140VK43;P25788-2;P25788 PSMA3 Proteasome subunit alpha type;Proteasome subunit alpha type-3 yes no 0 0 0 4.5 0.5 1 1 52.593 52.642 2 0.0027476 14873 20230619_1885_Aki_TMTPro18x_K_F5 103.55 56.465 105730 78746 82566 106510 109530 148610 111000 101420 390030 111940 84293 108290 128330 105630 109870 156820 122180 127050 97533 72344 86391 105730 112580 145890 120030 107170 368470 113230 102830 110020 128870 111730 112990 154960 116820 120970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157470000 3952 1225 3765 7322;7323 6000 6000 1 9606 Homo sapiens 0.015340786605861467 DGVWKPTLVILR Unmodified 1395.8238 0.82382054 4304 V9HVZ6;Q92747;Q53GB6;A0A0K0K1L3;Q59GQ0;A0A1W2PNV4;Q92747-2;E9PF58;Q75MY0 HEL-68;ARPC1A Actin-related protein 2/3 complex subunit 1A yes no 0 0 1 5 0 1 59.483 59.537 3 0.00021768 17712 20230619_1885_Aki_TMTPro18x_K_F5 103.13 59.83 175870 164900 157930 179550 269340 361410 232130 229520 328520 55732 45956 37114 35609 34069 96155 48839 45173 34198 162640 151040 163840 182380 270690 348410 238850 238830 317120 65740 60052 38606 39684 36001 93634 48179 43638 32677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35332000 3953 4304 3766 7324 6001 6001 1 9606 Homo sapiens 0.14174158345122123 DGVWNLQNEVTK Unmodified 1401.6888 0.6888432 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 6 0 1 56.363 56.437 2 0.00017116 16632 20230619_1886_Aki_TMTPro18x_K_F6 129.84 103.24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3954 1863 3767 7325 6002 6002 1 9606 Homo sapiens 0.004066334126946458 DGVYVLDLAAK Unmodified 1162.6234 0.6233894 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 5.8 0.748 2 2 1 61.378 61.428 2;3 0.0010337 18418 20230619_1887_Aki_TMTPro18x_K_F7 120.12 81.097 823990 693910 810400 827250 596400 722610 709330 693900 843080 1004000 947730 917910 1046200 894020 923940 1093800 956760 1078400 761950 636360 821180 823310 640180 738100 713370 719460 856390 995310 971510 935020 1058800 933680 944480 1094600 915940 1024000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2609900000 3955 161 3768 7326;7327;7328;7329;7330 6003;6004;6005 6005 3 9606 Homo sapiens 0.04858263957635245 DGWGGYGSDK Unmodified 1040.4199 0.41993856 2020;3876 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 0 4 0.816 1 1 1 46.438 46.505 2 0.0010026 12377 20230619_1883_Aki_TMTPro18x_K_F4 113.93 68.208 248900 232010 250870 237070 283040 342610 301730 292680 371340 342700 332570 280500 358550 254140 304720 275630 366220 280450 230360 212400 255150 240520 292270 337320 305230 303640 372850 341900 343770 286700 362260 264490 313990 277040 349200 266640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236610000 3956 2020;3876 3769 7331;7332;7333 6006 6006 1 9606 Homo sapiens -0.09865460763944611 DGWPAMCIHGDK Oxidation (M) 1401.5806 0.58055508 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 1 0 4.5 0.5 1 1 43.758 43.82 3 0.0045983 11089 20230619_1885_Aki_TMTPro18x_K_F5 70.089 57.924 103780 85425 104070 104230 113090 121230 109750 113510 146150 115980 129290 122610 135220 109660 126000 116390 137100 121630 95967 78365 105820 103950 116690 121130 112000 116550 146080 117350 133650 123750 137350 113930 128830 117190 130960 115530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99921000 3957 1328 3770 7334;7335 6007;6008 6008 836 2 9606 Homo sapiens -0.10417197433753245 DGWPAMGIHGDK Oxidation (M) 1298.5714 0.5713706 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 yes no 0 1 0 5 0.816 1 1 1 42.904 42.978 3 0.0097971 10831 20230619_1883_Aki_TMTPro18x_K_F4 65.092 51.43 436850 360280 443110 480880 502200 526900 565600 526870 657520 474910 508880 481760 530800 410960 499540 510430 478370 468530 404010 330810 450760 476270 518470 529290 569180 536990 658130 483290 529920 486600 539290 431640 507400 509020 457840 445490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 474280000 3958 3137 3771 7336;7337;7338 6009;6010;6011 6009 1820 3 9606 Homo sapiens -0.06597222727782537 DGWPAMGIHGDK Unmodified 1282.5765 0.57645598 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 6 0 1 48.249 48.328 3 1.0294E-05 13136 20230619_1886_Aki_TMTPro18x_K_F6 134.98 110.18 241380 187640 191720 212830 194920 257200 247330 248270 308490 238430 195120 162540 235110 180880 196280 235050 223280 195380 222750 172050 199140 213490 204170 256420 248110 253890 306190 239380 207040 169240 236790 188960 201960 233010 213180 186090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 273970000 3959 3137 3771 7339 6012 6012 1 9606 Homo sapiens -0.053529188651509685 DGYDYDGYR Unmodified 1122.4254 0.42541787 3140 J3KTL2;Q07955;Q59FA2;Q07955-3;Q07955-2;A8K1L8 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 2 0.816 1 1 1 41.319 41.364 2 4.8306E-06 10396 20230619_1881_Aki_TMTPro18x_K_F2 184.38 147.82 434130 343210 350600 446120 494410 531000 473670 479370 764010 590730 655670 591520 603080 522470 508900 650030 632580 639690 400700 315090 365840 442960 502280 529330 487460 496190 756940 591590 674790 598420 612920 547930 526760 650180 604100 607660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1287700000 3960 3140 3772 7340;7341;7342 6013;6014 6014 2 9606 Homo sapiens -0.1308978197214401 DGYNYTLSK Unmodified 1059.4873 0.48728985 3537 P31949;V9HWH9;B2R5H0 S100A11;HEL-S-43 Protein S100-A11;Protein S100-A11, N-terminally processed;Protein S100 yes no 0 0 0 6.5 0.5 1 1 47.403 47.487 2 3.3283E-06 12802 20230619_1886_Aki_TMTPro18x_K_F6 187.5 143.7 116880 82082 90669 190100 451480 548560 586960 614420 841960 541860 379110 392940 701620 379830 368210 690960 484040 398720 107780 76018 100820 187460 444790 528370 590520 620210 824460 547560 424550 405710 688840 409360 388420 672010 461420 382110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 539870000 3961 3537 3773 7343;7344 6015;6016 6015 2 9606 Homo sapiens -0.040074305529969934 DGYQQNFK Unmodified 998.44576 0.44575938 3890 Q14444-2;Q14444;G3V153;B3KXU8;B4DSF8 CAPRIN1 Caprin-1 yes no 0 0 0 5 0.816 1 1 1 42.373 42.461 2 0.0015979 10509 20230619_1886_Aki_TMTPro18x_K_F6 140.09 111.35 438080 308550 406590 424650 520780 555830 522690 522530 678600 565960 605210 526000 620620 519010 469370 524160 657430 578440 404490 283580 417500 420940 532110 551260 531560 537080 679280 568800 624280 535730 625860 536100 490570 529590 626660 549120 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 663220000 3962 3890 3774 7345;7346;7347 6017;6018;6019;6020 6019 4 9606 Homo sapiens -0.053525665216625384 DGYRDGYR Unmodified 1000.4363 0.43625733 2578 P23588;E7EX17;B4DRM3;P23588-2;F8VX11 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 1 2.5 0.5 1 1 28.338 28.431 3 0.070976 4981 20230619_1882_Aki_TMTPro18x_K_F3 47.198 8.0497 21815 18393 22150 21513 30941 19370 24086 29060 30418 23854 29060 21343 25478 19296 24926 20021 31402 24001 20178 16865 22580 21462 31150 20014 24892 28859 30556 24308 29668 21738 26080 20033 25682 20347 29932 22781 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14994000 3963 2578 3775 7348;7349 6021 6021 1 9606 Homo sapiens -0.06394334807191626 DGYSYGSR Unmodified 903.37226 0.37226009 1567 A0A590UJK4;A0A590UK01;A0A590UJP7;Q59GY3;A8K588;A0A590UK80;Q13247-3;Q13247;V9HVZ0;B5BU15;Q13247-2 SRSF6;HEL-S-91;SFRS6 Serine/arginine-rich splicing factor 6 yes no 0 0 0 3 0.816 1 1 1 33.387 33.446 2 0.0016054 6892 20230619_1883_Aki_TMTPro18x_K_F4 139.97 104.09 83711 45073 99546 106360 131400 147170 111050 134390 124490 93759 145420 146260 144200 114940 120040 60245 162930 135320 77361 41813 100330 102780 133400 145270 113660 137020 126750 98552 148140 144940 146020 116820 124490 65840 155280 127830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 183880000 3964 1567 3776 7350;7351;7352 6022 6022 1 9606 Homo sapiens -0.08329114964135442 DHADVSNQLYACYAIGK Unmodified 1923.8785 0.87851124 1233 A0A140VK65;P21281;B4DFM5;B4DQI9 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 7 0 1 51.617 51.691 3 2.1666E-06 14340 20230619_1887_Aki_TMTPro18x_K_F7 109.07 96.242 161940 69971 97202 125510 116780 106660 126740 133870 157370 181450 181370 197720 227970 187740 102280 238100 153250 231700 148800 64705 104560 121850 120060 109900 128170 136150 159720 181270 186910 199670 225170 196660 109820 237670 146680 219850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 467430000 3965 1233 3777 7353 6023;6024 6023 2 9606 Homo sapiens -0.04647287427064839 DHAECPVSACTCK Unmodified 1533.601 0.60103253 602 A0A024RA24;B4DGE7;Q9NXC5 FLJ20323;MIOS WD repeat-containing protein mio yes no 0 0 0 3.5 0.5 1 1 34.94 34.995 3 0.0017042 7581 20230619_1882_Aki_TMTPro18x_K_F3 76.073 71.525 32313 14301 26703 32130 37658 30903 33586 35712 48383 29418 36472 36130 40087 34374 23075 40689 37257 44725 29750 13271 27776 30934 38096 31447 34545 35985 47916 30309 38105 36347 40009 35851 24647 40957 35562 42410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11550000 3966 602 3778 7354;7355 6025;6026 6025 2 9606 Homo sapiens -0.1444239483621459 DHAGVMGESNR Unmodified 1171.504 0.50401932 2366 B3KNU0;P52306-4;P52306;P52306-5;B7Z4M5;P52306-6;P52306-2;P52306-3;Q6U7G8 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes no 0 0 0 2 0 1 26.821 26.898 3 0.033147 4493 20230619_1881_Aki_TMTPro18x_K_F2 44.765 28.874 0 0 0 0 0 0 0 771.97 0 0 873.43 0 0 1234.2 0 0 1150 1333.2 0 0 0 0 0 0 0 711.56 0 0 810.2 0 0 1164.1 0 0 1090.5 1251.5 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 1 1 7377000 3967 2366 3779 7356 6027 6027 1 9606 Homo sapiens -0.07487252938699385 DHASIQMNVAEVDK Unmodified 1555.7301 0.73005609 3742 Q8WVC2;Q6FGH5;P63220;Q9BYK1 RPS21 40S ribosomal protein S21 yes no 0 0 0 5.67 1.25 1 1 1 44.737 44.809 3;4 7.1872E-07 12012 20230619_1886_Aki_TMTPro18x_K_F6 131.06 119.79 267160 316920 299080 323140 282460 365800 314530 314700 360760 400890 448450 425200 430160 351810 438910 399680 517460 440300 247980 289920 301120 326500 295940 365540 316860 327360 368490 401220 455080 428050 439960 367980 450220 403300 493810 418050 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 172020000 3968 3742 3780 7357;7358;7359 6028;6029;6030;6031 6030 4 9606 Homo sapiens -0.02557973610123554 DHAVFTR Unmodified 844.41915 0.4191507 3532 P31689;P31689-2;B7Z5C0;Q9NXZ8 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 yes no 0 0 0 5 0 1 30.493 30.569 2 0.024527 5885 20230619_1885_Aki_TMTPro18x_K_F5 89.296 73.142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3969 3532 3781 7360 6032 6032 1 9606 Homo sapiens -0.009282106223281517 DHAVVVGVYRPPPK Unmodified 1532.8463 0.8463469 3487 Q96BS4;P22087 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 0 1 2 0 1 40.743 40.817 4 6.8354E-05 10180 20230619_1881_Aki_TMTPro18x_K_F2 109.44 92.161 461700 98750 293940 454230 484250 335510 462560 485310 626260 577050 659490 673060 783070 574550 333110 705470 422000 808860 423660 94045 316150 427120 486470 351520 472510 487980 630040 581130 679780 675710 773130 603390 353790 711400 405580 765750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1112800000 3970 3487 3782 7361 6033 6033 1 9606 Homo sapiens 0.10123757742758244 DHDVMLFLK Oxidation (M) 1132.5587 0.55868065 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 1 0 6 0 1 50.924 51.001 3 0.00073868 14345 20230619_1886_Aki_TMTPro18x_K_F6 97.431 49.148 63627 38167 45990 60170 60178 49409 71761 71120 85365 69527 80723 75468 88445 65655 52581 97178 55144 80945 58601 35163 48476 58796 61615 51293 72065 71122 85946 70537 83285 76105 88241 69727 54505 96100 52915 76959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13228000 3971 1601 3783 7362 6034 6034 1042 1 9606 Homo sapiens -0.002296341199780727 DHENIVIAK Unmodified 1037.5506 0.55055881 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;Q96C96;B3KTQ9 P4HB Protein disulfide-isomerase yes no 0 0 0 3 0 1 40.974 41.033 3 0.068693 10032 20230619_1882_Aki_TMTPro18x_K_F3 53.327 35.463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3972 537 3784 7363 6035 6035 1 9606 Homo sapiens 0.0332855495489639 DHFEEAMR Oxidation (M) 1049.4236 0.42364373 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;Q96IF9;Q0IIN5;Q9NTC4;A0A7P0TA22 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 1 0 1.5 0.5 1 1 29.187 29.223 3 0.070521 5762 20230619_1880_Aki_TMTPro18x_K_F1 40.021 35.056 19699 10291 24360 24019 37739 29735 26539 36861 39270 25492 36005 38571 32403 34604 36647 23400 37251 35528 18209 9546.4 24539 23190 37758 29797 27824 36825 39106 26784 36960 38413 33434 35209 37147 24426 35623 33623 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91740000 3973 3656 3785 7364;7365 6036 6036 2356 1 9606 Homo sapiens -0.09909114261745344 DHFEEAMR Unmodified 1033.4287 0.42872911 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;Q96IF9;Q0IIN5;Q9NTC4;A0A7P0TA22 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 2 0.816 1 1 1 34.902 34.941 3 1.1409E-05 7652 20230619_1881_Aki_TMTPro18x_K_F2 170.3 154.76 129800 58022 105480 116300 147340 110460 144900 160170 214590 136730 159040 152030 160770 129830 112410 159570 123990 147490 119500 53733 109810 112540 149440 113300 148330 159510 212180 140000 165720 152990 161690 136220 116070 159070 118690 140130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106860000 3974 3656 3785 7366;7367;7368 6037;6038 6038 2 9606 Homo sapiens -0.08664810399136513 DHFGFNPEK Unmodified 1089.488 0.48795855 960 B7Z876;B7Z3A4;A0A0A0MT33;Q9UPN6;Q9UPN6-2;Q9H8B2;Q8NDE9;Q59EY7 SCAF8;DKFZp434J2412 Protein SCAF8 yes no 0 0 0 5 0 1 44.2 44.279 3 0.015937 11357 20230619_1885_Aki_TMTPro18x_K_F5 66.19 42.87 46532 31088 37797 41478 50560 51388 52418 46080 87151 43736 42483 39561 48953 36357 36001 43268 41381 43410 42911 28570 39336 41152 51612 51093 53739 47390 84905 44311 45925 40256 49129 38006 37173 43357 39555 41222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15578000 3975 960 3786 7369 6039 6039 1 9606 Homo sapiens -0.05320591113286355 DHFGLEGDEESTMLEDSVSPK Unmodified 2321.0005 0.0005364496 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 1 0 1 56.872 56.872 3 9.2376E-07 17201 20230619_1880_Aki_TMTPro18x_K_F1 96.487 92.049 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3976 1292 3787 7370 6040 6040 1 9606 Homo sapiens -0.10712379716687792 DHFGRPPVDIR Unmodified 1307.6735 0.67346791 960 B7Z876;B7Z3A4;A0A0A0MT33;Q9UPN6;Q9UPN6-2;Q9H8B2;Q8NDE9;Q59EY7 SCAF8;DKFZp434J2412 Protein SCAF8 yes no 0 0 1 7 0 1 37.53 37.595 4 0.00024506 8265 20230619_1887_Aki_TMTPro18x_K_F7 119.74 84.329 36239 10291 27348 31580 31022 26137 29465 34200 46132 35497 34692 37554 44022 36911 27078 42611 33188 39651 33305 9649.2 28586 30036 31884 27007 30317 34409 45583 35887 36532 38011 43830 38394 28259 42519 31740 37668 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43021000 3977 960 3788 7371 6041 6041 1 9606 Homo sapiens 0.031938114061631495 DHGGALGPEEFK Unmodified 1255.5833 0.5833155 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;Q96BG6;O43707-2;O43707-3;A0A0S2Z3X3 ACTN4 Alpha-actinin-4 yes no 0 0 0 3 0 1 43.757 43.826 3 0.0018509 11272 20230619_1882_Aki_TMTPro18x_K_F3 79.152 57.78 132360 60544 117390 158420 120510 77379 137270 142220 120820 233660 317760 363050 338480 275110 207150 233030 332330 357040 121940 56337 120720 150710 124890 85892 137110 143400 132150 234820 317760 359350 338440 284610 219990 241740 316940 337710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111760000 3978 1069 3789 7372 6042 6042 1 9606 Homo sapiens -0.0342528271289666 DHGLEVLGLVR Unmodified 1206.6721 0.67207093 1193;2313 B4DIZ6;A0A140VJQ3;Q96DE0-3;Q96DE0;B4DLR9;K7EIN2;B2RD96;Q9BRJ7 NUDT16;NUDT16L1 U8 snoRNA-decapping enzyme;Protein syndesmos no no 0 0 0 6.5 0.5 1 1 52.238 52.315 3 4.9551E-09 14910 20230619_1886_Aki_TMTPro18x_K_F6 175.33 151.34 31642 12873 23037 31315 27983 19318 26012 28178 39220 37990 40595 34793 38623 34332 23380 42329 26336 39812 29101 11971 24223 29917 28579 20651 26754 28444 39262 37773 41427 35477 38761 35847 24319 42210 25263 37791 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143650000 3979 1193;2313 3790 7373;7374 6043;6044 6043 2 9606 Homo sapiens 0.0770017731738335 DHIMEIFSTYGK Unmodified 1439.6755 0.67550132 2826 Q15287;D3DU92;H3BTC0;H3BMM9;H3BV80;Q15287-2;Q15287-3;A0A024R9P1;H3BMS0 RNPS1;hCG_2026745 RNA-binding protein with serine-rich domain 1 yes no 0 0 0 8 0 1 59.192 59.234 3 4.4164E-13 17474 20230619_1888_Aki_TMTPro18x_K_F8 196.16 184.24 132340 24386 56794 101080 109000 47874 107200 122420 167870 133770 148430 134080 171470 126220 71703 166210 67114 151510 121200 23194 64943 94940 108780 54196 109990 120190 166720 134600 153920 135970 169350 132650 74986 165270 64843 143750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93353000 3980 2826 3791 7375 6045 6045 1 9606 Homo sapiens -0.026749406908948004 DHINDIIK Unmodified 966.51345 0.51344502 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;A0A0J9YXZ5;Q6P1N4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 4.5 0.5 1 1 43.625 43.687 3 0.0006051 11078 20230619_1885_Aki_TMTPro18x_K_F5 131.44 70.467 45177 18200 25809 36981 46147 27263 49200 52425 66143 47405 57508 55078 57568 47635 31490 63203 38398 60632 41493 16871 28182 35659 46292 28910 49913 51673 66003 48419 59345 55366 57504 50201 33050 63019 36826 57535 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143720000 3981 707 3792 7376;7377 6046 6046 1 9606 Homo sapiens 0.02884883409149097 DHINLPGFSGQNPLR Unmodified 1663.8431 0.84305243 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;A0A8V8TL37 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 0 0 1.5 0.5 1 1 52.457 52.474 3 1.0315E-18 15327 20230619_1880_Aki_TMTPro18x_K_F1 198.23 155.44 102750 54444 79244 85316 91632 82297 99981 94064 123790 104000 108600 103390 121750 91991 77130 127820 88760 127650 94621 50189 82657 83564 94366 83733 101020 95566 124120 104590 112610 104670 121640 97224 80159 127690 85082 121100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 603190000 3982 3373 3793 7378;7379 6047;6048 6047 2 9606 Homo sapiens 0.03768462898096914 DHIVLTVLPDQDQSDETQEK Unmodified 2309.1023 0.1022994 1610 A0A6M8YHF9 yes yes 0 0 0 2.5 0.5 1 1 53.187 53.233 3 5.5908E-23 15811 20230619_1881_Aki_TMTPro18x_K_F2 189.87 171.04 76150 34159 46441 60713 61786 50424 73535 76339 90737 96964 83762 80529 121100 91670 58177 134580 76146 110300 69988 31576 49953 58971 63235 52373 73958 76718 91287 96379 87793 82976 119350 96498 61698 132950 72919 104900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 563950000 3983 1610 3794 7380;7381 6049;6050 6049 2 9606 Homo sapiens 0.00011234697421969031 DHLVNTETK Unmodified 1055.5247 0.52473799 2917 E9PHT6;Q9NVE7;Q7RTX2;B4DZX1;B4DHW9 PANK4 Pantothenate kinase 4 yes no 0 0 0 3.5 0.5 1 1 35.698 35.751 3 0.04469 7908 20230619_1882_Aki_TMTPro18x_K_F3 41.117 24.893 26707 21094 29340 28017 30470 31066 29075 28939 41037 35656 38409 39463 39286 34054 32985 33671 54216 46894 24710 19371 29589 27767 31516 31140 29772 29892 41013 35807 39566 39686 39800 35305 34821 34580 51618 44427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71595000 3984 2917 3795 7382;7383 6051 6051 1 9606 Homo sapiens -0.0008033928738768736 DHLVTAYNHLFETK Unmodified 1686.8366 0.83657007 3774 Q00688;Q53GD8 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 4.5 3.5 1 1 51.061 51.1 4 6.356E-14 13963 20230619_1888_Aki_TMTPro18x_K_F8 194.23 187.19 577150 78831 263200 450460 433900 179460 472820 502540 628230 533480 621400 586630 664150 544210 262040 744090 339300 682540 528500 76320 296830 420120 436920 209480 478990 492030 630560 538990 638760 592330 657140 573300 280670 739550 326270 647670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1134900000 3985 3774 3796 7384;7385 6052;6053 6053 2 9606 Homo sapiens 0.02062524946677513 DHLYGTLDPNTR Unmodified 1400.6684 0.66844211 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4 0 1 40.942 40.984 3 3.7298E-07 9934 20230619_1883_Aki_TMTPro18x_K_F4 135.1 116.32 159600 81953 166830 184990 242380 189680 204350 209720 163830 146480 208850 155760 142450 103080 212130 92411 109070 88298 147290 75984 170020 178240 243980 191910 207070 211190 170870 151600 209050 156040 150500 107560 208130 93240 105210 83986 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295140000 3986 3881 3797 7386 6054 6054 1 9606 Homo sapiens -0.015865372470898365 DHMVSPTAVAFLER Unmodified 1571.7766 0.77661235 3278 X6R2W0;Q5U8S2;O60499;K7EJ05;K7EPP9;K7ELY2;K7EIY4 STX10 Syntaxin-10 yes no 0 0 0 6 0 1 52.582 52.66 3 0.077424 15078 20230619_1886_Aki_TMTPro18x_K_F6 38.613 24.455 39270 37367 42371 46622 41689 55542 46755 48082 60909 52276 50740 40216 48587 45678 49138 48791 48803 51201 36372 34269 42813 46429 43582 55289 47287 49734 60823 52280 52375 41592 49714 47104 49938 49121 46714 48596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19341000 3987 3278 3798 7387 6055 6055 1 9606 Homo sapiens 0.013595110118330922 DHNIPGELER Unmodified 1178.568 0.56799978 3549 P35580;P35580-3 MYH10 Myosin-10 yes no 0 0 0 2 0 1 35.858 35.915 3 0.0348 7994 20230619_1881_Aki_TMTPro18x_K_F2 52.693 36.802 26305 15176 21717 24771 27999 29114 29711 28825 37276 30877 34025 37267 36427 26221 29448 32982 33906 33660 24243 13990 22556 24269 28640 29094 30078 29524 37399 31295 35180 37155 36740 27786 30332 33065 32396 31964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58372000 3988 3549 3799 7388 6056 6056 1 9606 Homo sapiens -0.01414149510083007 DHNVEFR Unmodified 915.41988 0.41987898 2899 E7ESL0;J3KQY1;Q9NWU5;Q9NWU5-2;Q9NWU5-3 MRPL22 39S ribosomal protein L22, mitochondrial yes no 0 0 0 2.5 0.5 1 1 30.543 30.623 3 0.0011283 5950 20230619_1881_Aki_TMTPro18x_K_F2 145.63 80.596 93364 21454 48610 77784 130130 61070 107160 121360 161720 110010 135680 133910 133600 125830 65046 133250 87208 120780 85601 20256 54418 73615 127650 64498 110950 119460 160450 112560 140180 134640 133250 130360 68973 132900 83458 114730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112030000 3989 2899 3800 7389;7390 6057 6057 1 9606 Homo sapiens -0.041214159732930966 DHPAFAPLYFPMELHR Unmodified 1939.9403 0.94032364 3103 I3L159;I3L1F5;Q6IBP2;Q6FHB5;Q53HF1;P30519;B3KSE0;A0A087WT44;P30519-2;I3L276;I3L4P8;A0A1B0GXH0;I3L463 HMOX2 Heme oxygenase 2 yes no 0 0 0 1.5 0.5 1 1 58.021 58.029 4 5.0431E-08 17702 20230619_1880_Aki_TMTPro18x_K_F1 130.72 114.6 36215 33753 37880 38709 32508 38654 38101 35635 43149 42159 43810 37388 46693 40789 42384 45639 45717 43588 33529 30931 38268 38695 34362 39027 38259 36801 43700 42130 45001 38317 47366 42219 43376 45666 43695 41430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 70087000 3990 3103 3801 7391;7392 6058;6059 6058 2 9606 Homo sapiens 0.007951087826995717 DHPALNYNIVSGPPSHK Unmodified 1844.9169 0.91694566 191 A0A024R277;A0A8I5QKQ8;A0A8I5KUM4;Q6NUL7;O15269;Q59EQ4;A0A2R8Y4S0;A0A2R8Y6A2;B4DR90;O15269-2 SPTLC1 Serine palmitoyltransferase 1 yes no 0 0 0 8 0 1 43.814 43.825 4 1.376E-23 11004 20230619_1888_Aki_TMTPro18x_K_F8 182.31 152.97 52190 35708 44120 50067 51300 49936 51857 58104 65976 63969 62130 61764 69477 62740 48012 73866 66434 75168 48148 32831 45624 49376 52722 50699 52702 58927 66284 64272 64214 62855 69698 65267 50363 74044 63446 71349 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72449000 3991 191 3802 7393 6060 6060 1 9606 Homo sapiens 0.02828386269720795 DHPAVAATLNNLAVLYGK Unmodified 1865.9999 0.99994701 3808;4492 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5;Q9H0B6;Q9H0B6-2;A8MZ87 KLC1;KNS2;KLC2 Kinesin light chain 1;Kinesin light chain 2 no no 0 0 0 4 0 1 61.385 61.388 4 3.2563E-06 18879 20230619_1883_Aki_TMTPro18x_K_F4 98.508 81.482 36748 27336 30243 35550 30965 32728 36503 37845 39786 41242 42156 38364 46141 39383 36680 50436 40034 49104 33910 25103 31305 35189 32259 33429 36592 38398 40454 41407 43281 39149 46515 41179 37732 50388 38335 46620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11824000 3992 3808;4492 3803 7394 6061 6061 1 9606 Homo sapiens 0.10158702997750879 DHPFGFVAVPTK Unmodified 1313.6768 0.67682195 2061 H3BQQ9;A8K503;Q7KZS0;B0QYN7;P63279;H3BPC4 UBE2I SUMO-conjugating enzyme UBC9 yes no 0 0 0 1.5 0.5 1 1 52.824 52.84 3 0.00014149 15526 20230619_1880_Aki_TMTPro18x_K_F1 105.65 96.216 971210 590100 891240 847790 824720 752380 874400 1062200 1138700 1047100 1120200 994580 1065800 982500 837990 1198400 882360 1161300 895990 543000 910430 834150 862630 775310 887710 1062700 1144000 1057300 1146500 1012600 1079100 1025000 860760 1197600 845740 1102400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2340500000 3993 2061 3804 7395;7396 6062;6063 6062 2 9606 Homo sapiens 0.0325306146019102 DHPHTAAYLQELGR Unmodified 1606.7852 0.7852032 4105 Q6GMV3 PTRHD1 Putative peptidyl-tRNA hydrolase PTRHD1 yes yes 0 0 0 5 0.816 2 2 2 38.42 38.492 3;4 6.6888E-22 8889 20230619_1885_Aki_TMTPro18x_K_F5 185.59 155.11 62674 45493 58966 65097 73887 80453 71103 78734 84921 68195 85789 88851 80735 82415 73895 83723 109210 93482 57883 41825 60469 64308 75509 80123 72297 80248 85694 70144 87771 89067 82371 85229 77255 84641 104040 88744 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 308840000 3994 4105 3805 7397;7398;7399;7400;7401;7402 6064;6065 6064 2 9606 Homo sapiens 0.0060820097264695505 DHPLPEVAHVK Unmodified 1240.6564 0.65642086 3445 P13073;H3BN72;H3BNV9;Q86WV2;H3BPG0 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes no 0 0 0 5 0.816 1 1 1 38.514 38.587 4 2.2339E-06 8957 20230619_1883_Aki_TMTPro18x_K_F4 158.05 134.81 583010 358490 522770 626660 726370 626680 759890 781700 914660 628490 778800 818760 841850 677130 655580 835410 694470 785310 537790 330690 539650 610490 738160 637220 768690 783780 916570 649440 808250 818160 848080 711420 673110 833680 664720 746090 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1615999999.9999998 3995 3445 3806 7403;7404;7405 6066;6067;6068 6066 3 9606 Homo sapiens 0.04571890800343681 DHPQQQPGMLSR Oxidation (M) 1408.6517 0.65174619 2351 B3KMF8;Q8WUH6 TMEM263 Transmembrane protein 263 yes no 0 1 0 4 0 1 23.114 23.181 3 0.00085071 3820 20230619_1883_Aki_TMTPro18x_K_F4 87.241 78.282 26753 19546 29766 36116 39401 33829 31952 31880 32175 27855 39053 38019 35401 34709 26448 29872 41093 35336 24744 18031 30154 35044 39873 34339 32670 32619 33020 28683 39564 38029 35860 35635 27875 30400 39136 33525 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49762000 3996 2351 3807 7406 6069 6069 1460 1 9606 Homo sapiens -0.036233614047205265 DHPQQQPGMLSR Unmodified 1392.6568 0.65683157 2351 B3KMF8;Q8WUH6 TMEM263 Transmembrane protein 263 yes no 0 0 0 4.5 0.5 1 1 31.555 31.625 3 0.00017448 6152 20230619_1883_Aki_TMTPro18x_K_F4 89.663 82.208 38596 24325 37982 41057 45824 51630 37845 45235 56496 36797 50272 51360 56255 53280 47223 55578 63560 54746 35633 22425 38765 40195 46812 51226 39219 46413 56183 38139 52128 51587 56854 54978 49120 55752 60595 52040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34721000 3997 2351 3807 7407;7408 6070;6071 6070 2 9606 Homo sapiens -0.02379057542088958 DHPYTWR Unmodified 973.44061 0.44061443 1224 A0A140VK39;Q9Y570;Q9Y570-4;Q9Y570-2;Q9Y570-3 PPME1 Protein phosphatase methylesterase 1 yes no 0 0 0 6 0.816 1 1 1 34.794 34.867 3 0.0010496 7491 20230619_1885_Aki_TMTPro18x_K_F5 153.15 113.15 149790 81443 119230 142410 143310 138890 142490 165700 222120 189890 205750 203100 207640 181710 134070 198290 188710 199200 137990 75177 124130 138680 147010 141290 146190 168000 221020 191070 211780 204850 208430 188990 141000 198870 180100 189150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132000000 3998 1224 3808 7409;7410;7411 6072;6073 6072 2 9606 Homo sapiens -0.04716825593618523 DHQFLEGK Unmodified 972.46649 0.46649483 4394 Q96RS6;Q96RS6-3;Q96RS6-2;A0A7I2V457 NUDCD1 NudC domain-containing protein 1 yes no 0 0 0 4 0 1 40.679 40.722 3 0.039747 9849 20230619_1883_Aki_TMTPro18x_K_F4 54.066 33.546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3999 4394 3809 7412 6074 6074 1 9606 Homo sapiens -0.020839761419892966 DHQPAPYSAVPYK Unmodified 1471.7096 0.70957864 3223 O14813 PHOX2A Paired mesoderm homeobox protein 2A yes yes 0 0 0 7 0.816 1 1 1 42.977 43.038 3 1.6094E-07 10482 20230619_1887_Aki_TMTPro18x_K_F7 145.41 118.07 252840 57724 133450 210540 220790 120820 246830 272150 311710 270700 359400 401130 349140 356230 194590 367250 243820 456510 231820 54515 147150 198640 222530 132460 249280 267560 315490 277540 366040 399780 349670 369290 204380 373340 234280 431870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 372590000 4000 3223 3810 7413;7414;7415 6075;6076 6076 2 9606 Homo sapiens -0.007407762076582003 DHQYGLPIK Unmodified 1069.5556 0.55564418 1794 A0A8Q3SHT1;A0A8Q3SHX7;Q9BSC4;B4DS83;Q9BSC4-4;A0A8Q3SHT6;Q9BSC4-3 NOL10 Nucleolar protein 10 yes no 0 0 0 7 0 1 44.265 44.347 3 0.00031823 11044 20230619_1887_Aki_TMTPro18x_K_F7 118.71 92.039 79956 28683 53915 74383 91029 58100 81236 88606 100160 90399 101910 102350 123430 98404 65551 124570 67766 118450 73475 26734 57566 71069 91108 60712 83043 88450 101050 91620 105340 103300 122470 103030 68151 124230 65167 112380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112260000 4001 1794 3811 7416 6077 6077 1 9606 Homo sapiens 0.0236485881750923 DHQYQFLEDAVR Unmodified 1519.7056 0.7055559 2263 B2R8R5;Q13263;Q13263-2;M0R3C0;M0R2I3 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 3 0.816 1 1 1 48.749 48.809 3 4.1303E-07 13437 20230619_1883_Aki_TMTPro18x_K_F4 154.67 130.11 359840 188850 273180 343810 355390 288850 383430 385290 468590 427270 469580 467310 514340 391750 300510 558070 482980 470640 331320 174460 286280 333540 362890 298520 387500 388110 472500 430730 483330 470320 513200 415420 320850 552450 460260 447990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 902630000 4002 2263 3812 7417;7418;7419 6078;6079 6079 2 9606 Homo sapiens -0.033508657013726406 DHRDNLEFFLAGIGR Unmodified 1758.8802 0.88016622 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 1 8 0 1 57.086 57.137 4 2.2509E-14 16648 20230619_1888_Aki_TMTPro18x_K_F8 191.19 153.42 63003 17836 38201 37732 29583 19998 27866 28296 58456 47894 46156 61071 62286 62134 33707 85062 41107 71934 57830 16598 40698 36226 31402 21772 29155 28892 57324 47797 48688 61448 61772 65193 35489 84216 39472 68349 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65048000 4003 3606 3813 7420 6080 6080 1 9606 Homo sapiens 0.031081344438234737 DHSGGIGDICK Unmodified 1157.5135 0.51352137 484 A0A024R811;Q53H82 LACTB2 Beta-lactamase-like protein 2 yes no 0 0 0 4 0 1 39.729 39.771 3 0.058669 9459 20230619_1883_Aki_TMTPro18x_K_F4 35.594 20.622 110120 68621 102270 100550 118660 119140 118090 117080 152880 115960 148110 134570 142310 120800 125480 114550 142100 137950 101620 63150 104760 99150 121920 119010 120170 119720 153420 117900 151810 135340 144630 124760 128740 116580 135780 130790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29447000 4004 484 3814 7421 6081 6081 1 9606 Homo sapiens -0.05893484653188352 DHSGTLGPEEFK Unmodified 1315.6044 0.60444487 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HKE2;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A1L0V1;B7Z2W3 ACTN1 Alpha-actinin-1 yes no 0 0 0 3 0 1 43.732 43.802 3 0.0014762 11257 20230619_1882_Aki_TMTPro18x_K_F3 83.226 70.245 75298 63307 86765 75934 69064 58395 67736 67186 73578 66395 91614 73529 75998 69984 76588 58453 76714 65620 69726 58060 86810 75476 72932 60653 68644 68054 75276 67367 92342 74246 78100 71680 77770 59407 73321 62291 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48998000 4005 387 3815 7422 6082 6082 1 9606 Homo sapiens -0.04073317404049703 DHSMEDPDK Oxidation (M) 1088.4081 0.40805325 4481 Q9C0C9;K7EQ12 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 0 1 0 1 0 1 28.899 28.899 3 0.013361 5582 20230619_1880_Aki_TMTPro18x_K_F1 65.347 53.753 5596.3 2510.2 4836.7 4839.3 6964 5602.8 5556.2 7888.8 8384.8 6167.3 8638.5 12336 10252 12210 5515.7 6641 8251 15386 5154.4 2323.2 5005.2 4705.6 7018.5 5660.2 5776.4 7848.9 8384.7 6515.6 8938.8 12222 10211 12298 5851.3 7250.2 7917.4 14495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1588700 4006 4481 3816 7423 6083 6083 2783 1 9606 Homo sapiens -0.1326144556944655 DHSYVIAGYYQANER Unmodified 1784.8118 0.81181188 3255 Q53Y03;O43402-2;O43402 COX4NB;EMC8 ER membrane protein complex subunit 8 yes no 0 0 0 5 0 1 43.956 44.035 3 0.0045557 11217 20230619_1885_Aki_TMTPro18x_K_F5 53.169 49.201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4007 3255 3817 7424 6084 6084 1 9606 Homo sapiens -0.0492015492666269 DHTLEDEDVIQIVK Unmodified 1652.8257 0.82573061 4705 Q9Y295;Q9UFA5 DRG1;DKFZp434N1827 Developmentally-regulated GTP-binding protein 1 yes no 0 0 0 2 0.816 1 1 1 54.797 54.821 3 1.0668E-06 16519 20230619_1881_Aki_TMTPro18x_K_F2 123.84 111 56469 41233 55880 61818 56711 48818 63038 59360 69218 66048 60780 63915 76149 60876 60922 84893 71663 61496 52176 37929 56846 60556 58899 50615 63380 60123 69862 66327 63446 64910 76496 64146 62940 83550 68392 58694 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 597900000 4008 4705 3818 7425;7426;7427 6085;6086 6085 2 9606 Homo sapiens 0.0254307778175189 DHTLVQTIAR Unmodified 1152.6251 0.62512073 3896 Q14684;Q14684-2;Q6PJM8 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 0 6.5 0.5 1 1 38.326 38.399 3 5.0973E-11 8607 20230619_1887_Aki_TMTPro18x_K_F7 217.12 170.05 246540 161760 193470 226110 249790 240840 262630 240670 322260 229430 239240 199120 242350 196840 203240 252440 217660 200380 227280 148740 201970 223170 255280 242450 265710 245640 321340 231780 249180 203690 245360 206060 208420 249760 207990 190940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 211590000 4009 3896 3819 7428;7429 6087;6088 6088 2 9606 Homo sapiens 0.054913177662683665 DHTVSGDEDYCPR Unmodified 1549.6103 0.61033488 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 0 1.5 0.5 1 1 32.601 32.631 3 7.0208E-08 7000 20230619_1880_Aki_TMTPro18x_K_F1 152.47 147.31 26876 10556 22614 23967 31250 27366 27969 31692 40676 37031 42157 44914 45107 42146 30033 39942 40502 48043 24738 9806.3 23455 23128 31666 27507 28787 32203 40772 37387 43303 45129 45256 43440 31440 40601 38703 45518 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63709000 4010 4666 3820 7430;7431 6089;6090 6089 2 9606 Homo sapiens -0.1424858695468174 DHVFLCEGEEPK Unmodified 1458.6449 0.64492948 1969 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2;H3BMV3;H3BMT0;H3BTV5 HN1L Hematological and neurological expressed 1-like protein yes no 0 0 0 2.5 0.5 1 1 44.699 44.776 3 1.0904E-09 12045 20230619_1881_Aki_TMTPro18x_K_F2 156.36 135.78 133380 69844 95796 113300 125960 107800 132790 133550 168960 143250 136980 144650 164450 132620 87160 191820 117440 155330 122770 64418 100970 110730 128530 110040 134540 134900 168800 144330 143180 146460 163280 140300 92267 189440 112340 147780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 401170000 4011 1969 3821 7432;7433 6091 6091 1 9606 Homo sapiens -0.06604719075949106 DHVPELVK Unmodified 935.50763 0.50763136 1315;3380 A0A1W2PPD9;Q7Z7Q9;Q9UMQ5;B4DP83;B4DRZ1;P04198 N-myc;MYCN N-myc proto-oncogene protein no no 0 0 0 4 0 1 42.845 42.888 3 0.0022617 10835 20230619_1883_Aki_TMTPro18x_K_F4 98.392 45.222 41129 19731 26836 34831 42710 34492 39722 41743 57177 43972 43590 49249 56718 41863 38117 64849 44865 54242 37823 18229 28722 33906 42996 35080 40736 42196 56706 44500 45949 49534 56554 44649 39613 64118 42926 51598 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33707000 4012 1315;3380 3822 7434 6092 6092 1 9606 Homo sapiens 0.03729784897461741 DIAAHIK Unmodified 766.43374 0.43373813 3739 Q6FGH9;P63167;F8VXL2;F8VRV5 DNCL1;DYNLL1 Dynein light chain 1, cytoplasmic yes no 0 0 0 7 0.816 1 1 1 40.191 40.24 3 0.0058034 9351 20230619_1887_Aki_TMTPro18x_K_F7 104.45 22.489 4466500 3420000 3807600 4466600 4870200 5045400 4759000 4647000 6712600 4856300 5302400 4631200 5293900 4408300 4758800 5697900 6300000 5490700 4123400 3140400 3942300 4430900 4974300 5049300 4862800 4780700 6665800 4895100 5500700 4709000 5379800 4623500 4938400 5690700 6007300 5220300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4217999999.9999995 4013 3739 3823 7435;7436;7437 6093;6094 6094 2 9606 Homo sapiens 0.04117861525787703 DIAANEENRK Unmodified 1158.5629 0.56291441 2824 D3DTE6;V9HW48;O75368 SH3BGRL;HEL-S-115 SH3 domain-binding glutamic acid-rich-like protein yes no 0 0 1 2.5 0.5 1 1 33.976 34.037 3 0.00044514 7210 20230619_1882_Aki_TMTPro18x_K_F3 113.38 85.17 65724 30133 81170 98270 165080 150140 117410 147400 135320 77687 133860 166370 100790 115010 141200 49406 148100 152760 60725 28184 82506 94149 163270 147720 121730 148810 136540 84976 136260 162930 106040 116810 142730 56802 141660 143980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129550000 4014 2824 3824 7438;7439 6095 6095 1 9606 Homo sapiens -0.010024533727346352 DIAAYIK Unmodified 792.43815 0.43815481 4348 Q96FJ2 DYNLL2 Dynein light chain 2, cytoplasmic yes yes 0 0 0 7.5 0.5 1 1 54.446 54.512 2 0.02183 15466 20230619_1888_Aki_TMTPro18x_K_F8 108.24 48.087 746690 636050 650350 784610 730290 822520 834760 823620 997500 795950 766390 805210 900130 763900 819750 997280 1012600 968690 689890 583470 670770 780560 755580 828840 840340 840700 997420 806630 803380 815990 910990 801700 846580 996260 966710 920530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 586930000 4015 4348 3825 7440;7441 6096;6097 6097 2 9606 Homo sapiens 0.033633259487032774 DIAGEFK Unmodified 778.38612 0.38611924 4099 Q6DD88;F5H6I7;B4DXC4 ATL3 Atlastin-3 yes no 0 0 0 4 0 1 49.326 49.362 2 0.040533 13679 20230619_1883_Aki_TMTPro18x_K_F4 85.212 26.231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4016 4099 3826 7442 6098 6098 1 9606 Homo sapiens -0.011938374650526384 DIAIAQR Unmodified 785.43955 0.43955179 4760 Q9Y6X9;Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 yes no 0 0 0 4 0 1 38.763 38.805 2 0.051609 9055 20230619_1883_Aki_TMTPro18x_K_F4 77.984 29.481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4017 4760 3827 7443 6099 6099 1 9606 Homo sapiens 0.03824960037468372 DIAIATR Unmodified 758.42865 0.42865276 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q5T9A4;Q5T9A4-3;A0A5K1VW56;Q9H834;Q8N3E6 ATAD3A;ATAD3B;DKFZp761L1023 ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B yes no 0 0 0 5 0 1 40.167 40.257 2 0.087777 9630 20230619_1885_Aki_TMTPro18x_K_F5 67.169 11.048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4018 4603 3828 7444 6100 6100 1 9606 Homo sapiens 0.03977557663188236 DIAPPPEECLQLLSR Unmodified 1736.8767 0.87672033 1845 Q99567;J3KMX1;A0A8V8TPS0;A0A8V8TPT0;A0A8V8TQB1;A0A8V8TQZ0;A0A8V8TQC3;A0A8V8TQC2;A0A8V8TRA5;A0A8V8TPT4;A0A8V8TQA5;B4DP20;I3L4K7 NUP88 Nuclear pore complex protein Nup88 yes no 0 0 0 4 0 1 59.44 59.442 2 2.5577E-05 18135 20230619_1883_Aki_TMTPro18x_K_F4 115.57 89.563 9628.4 7741.8 9013 12984 8478 8637.6 9083.1 8849.7 12869 13617 13059 12548 12375 9180 11899 15138 11512 13287 8897.5 7129 9220.5 12611 8867.5 9067.1 9242 9163.4 12909 13471 13354 12675 12619 9900 12106 15002 11031 12633 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20022000 4019 1845 3829 7445 6101 6101 1 9606 Homo sapiens 0.037757035549475404 DIAQFEQDGILR Unmodified 1403.7045 0.70449327 2149 E9PNH0;B3KWF0;Q8WVV2;H0YCD7;B3KP32;B4DMI4;A8KAD5;Q9H0X9-3;Q9H0X9-2;Q9H0X9 OSBPL5 Oxysterol-binding protein;Oxysterol-binding protein-related protein 5 yes no 0 0 0 3 0 1 58.244 58.275 3 0.0018804 17709 20230619_1882_Aki_TMTPro18x_K_F3 73.466 60.458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4020 2149 3830 7446 6102 6102 1 9606 Homo sapiens 0.018789199297543746 DIAWTEDSKR Unmodified 1219.5833 0.5833155 4000 Q59ER5;Q53H17;Q53GN4;A0A8V8TNU2;A0A8V8TNT7;O75083;A0A8V8TP22;A0A8V8TQ74;A0A8V8TQK0;V9HWG7;A0A8V8TP31;D6RD66 WDR1;HEL-S-52 WD repeat-containing protein 1 yes no 0 0 1 4 0 1 43.692 43.736 3 0.00034925 11183 20230619_1883_Aki_TMTPro18x_K_F4 112.95 87.509 54720 54857 58147 57124 72394 93778 75785 62690 99274 71774 70926 60156 74805 58592 80525 69628 61527 62492 50695 50216 59020 57983 74295 91318 76870 66439 98604 71808 74221 61577 76447 61101 80674 69437 59058 59427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153120000 4021 4000 3831 7447 6103 6103 1 9606 Homo sapiens -0.0176928271291672 DICNDVLSLLEK Unmodified 1417.7123 0.71228076 2805 D0PNI1;P63104;E7EX29;B0AZS6;E7ESK7 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 0 6.17 1.34 1 1 1 2 1 64.859 64.888 2;3 2.1402000000000002E-34 20041 20230619_1887_Aki_TMTPro18x_K_F7 269.91 190.97 371920 261680 331410 372890 234980 315120 311440 318640 323060 422400 410830 415660 477170 411530 409410 503550 439260 493800 343300 240600 338850 366580 254280 322930 310240 328180 332420 420970 420310 422220 481670 429510 419700 503720 420370 468920 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4109399999.9999995 4022 2805 3832 7448;7449;7450;7451;7452;7453 6104;6105;6106;6107 6107 4 9606 Homo sapiens 0.020133111350105537 DIDDDLEGEVTEECGK Unmodified 1822.7415 0.74146822 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 0 0 1.5 0.5 1 1 55.036 55.057 2;3 3.4156E-64 16462 20230619_1880_Aki_TMTPro18x_K_F1 303.51 254.16 26518 23649 27103 33540 27461 30717 31604 33459 40502 34772 37240 35611 37635 37991 32385 39936 38273 38981 24538 21723 27530 33008 28620 31329 31903 34031 40607 35114 38361 36210 38196 39185 33391 40031 36567 37032 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100270000 4023 1044 3833 7454;7455 6108;6109 6108 2 9606 Homo sapiens -0.1369928588796938 DIDEVSSLLR Unmodified 1145.5928 0.59281755 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 4 0.816 1 1 1 59.464 59.492 2 0.011872 18222 20230619_1882_Aki_TMTPro18x_K_F3 74.376 47.317 510030 295850 214510 400090 309480 362190 425280 336530 390080 370700 340330 352340 353280 304250 414050 575360 475410 393140 468490 272120 245140 394600 317820 368430 420470 346910 397420 372310 352430 357380 363260 329450 424230 563100 453710 375640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1441900000 4024 3621 3834 7456;7457;7458 6110 6110 1 9606 Homo sapiens 0.025844855726063543 DIDFLAEK Unmodified 949.47566 0.47566253 427 P20839-6;B4DNJ7;P20839-5;P20839-7;P20839-3;P20839;P20839-2;P20839-4;Q6ZNB1;A0A024R725;C9J381;B3KRZ3;Q5H9Q6;A0A3B3IRL5;C9K0R9;C9J029;H7C511;H7C5T1 IMPDH1;IMPDH;DKFZp781N0678 Inosine-5'-monophosphate dehydrogenase 1;Inosine-5'-monophosphate dehydrogenase yes no 0 0 0 3.5 0.5 2 2 58.406 58.422 2;3 0.0024018 17794 20230619_1882_Aki_TMTPro18x_K_F3 134.91 58.011 180070 156370 180270 189820 184350 219790 201920 192990 249720 282730 222160 213190 287330 213570 219280 290490 248540 248890 166570 143410 183250 189340 191820 219350 204030 201370 250970 278840 231970 219590 287770 224520 226180 288130 237520 236840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 167180000 4025 427 3835 7459;7460;7461;7462 6111;6112;6113 6111 3 9606 Homo sapiens -0.0010962757633024012 DIDIHEVR Unmodified 995.50361 0.50360861 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 2.5 1.12 1 1 1 1 38.431 38.471 3 1.6062E-07 9366 20230619_1880_Aki_TMTPro18x_K_F1 197.5 154.38 776770 611510 692840 774320 945450 943540 864400 887370 1105600 908100 1024100 948000 1034900 909560 876290 1064600 1049400 957530 717450 561270 714970 770700 959680 940180 883570 910780 1109000 918420 1054300 959930 1048700 947380 904430 1060900 1001700 910940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7525099999.999999 4026 3776 3836 7463;7464;7465;7466 6114;6115;6116 6114 3 9606 Homo sapiens 0.005676954037539872 DIDILNSAGK Unmodified 1044.5451 0.54513908 2629 B7ZAX9;B4DZC0;O60264;Q4W5H1 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 4.5 0.5 1 1 54.578 54.62 3 0.014804 15728 20230619_1885_Aki_TMTPro18x_K_F5 65.5 29.674 33871 27979 33384 35510 36079 35191 32477 34296 42074 34399 43477 36611 41128 34939 36053 47533 43410 43999 31318 25677 33995 35239 37147 35603 33269 35106 42343 34846 44382 37071 41815 36755 37222 47330 41467 41826 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 247570000 4027 2629 3837 7467;7468 6117 6117 1 9606 Homo sapiens 0.02464831372435583 DIDNLVQR Unmodified 971.50361 0.50360861 193 Q53FS4;B2R774;A0A024R2A7;P49257 LMAN1 Protein ERGIC-53 yes no 0 0 0 3 0 1 45.958 46.034 2 0.0095388 12328 20230619_1882_Aki_TMTPro18x_K_F3 101.43 62.468 126920 142170 145580 139960 157410 171940 180660 159250 176350 151950 170550 133940 154810 108260 212020 116450 127790 110130 117770 130040 146510 142060 163060 171240 180630 163400 179560 153440 174470 135990 160940 113070 209410 116870 122960 104730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162090000 4028 193 3838 7469 6118 6118 1 9606 Homo sapiens 0.016716954037633514 DIDNNLITSTPR Unmodified 1357.6838 0.68375782 352 A0A024R5Q8;Q05D32-2;Q05D32;H0YNU2;H0YNW9;H0YMH7 CTDSPL2 CTD small phosphatase-like protein 2 yes no 0 0 0 4 0 1 48.049 48.089 2 0.00050709 13100 20230619_1883_Aki_TMTPro18x_K_F4 122.33 87.518 68268 52208 70262 73519 49161 43942 66574 69895 47353 103160 110390 102120 120220 92286 84875 125600 120990 110350 63115 47980 70893 72128 53051 47303 65633 70518 52040 102290 110640 103440 120640 97307 89143 124710 115340 105010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109370000 4029 352 3839 7470 6119 6119 1 9606 Homo sapiens 0.019223295500751192 DIDPQNDLTFLR Unmodified 1445.7151 0.71505795 4558 Q9NP97;A0A8V8TKK9;A0A140VJH9;B4DFR2;B1AKR6;Q8TF09;H3BQI1 DYNLRB1;DYNLRB2 Dynein light chain roadblock-type 1;Dynein light chain roadblock-type 2 yes no 0 0 0 4 0.816 1 1 1 60.283 60.31 2 2.3059E-17 18544 20230619_1882_Aki_TMTPro18x_K_F3 224.42 173.07 432590 351270 402780 456160 376640 446650 434850 454740 496490 534070 537430 521830 595250 489210 515150 652380 581210 636840 399760 322460 411590 451870 395220 452470 437180 466120 504220 535060 551870 529500 601790 514440 529680 651640 555850 604830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 309940000 4030 4558 3840 7471;7472;7473 6120;6121 6120 2 9606 Homo sapiens 0.010029025841731709 DIDSFVPSK Unmodified 1006.4971 0.49712625 239 P10515;A0A024R3D8;Q86YI5;A0A7P0TBE2;A0A7P0TAX2;A0A7P0TAG1;B4DJX1;A0A7P0TBK2;A0A7P0T997;A0A7P0Z4G4;H0YDD4;E9PEJ4;A0A7P0TA47;B4DS43;Q01991;B4DLQ2 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial;Acetyltransferase component of pyruvate dehydrogenase complex yes no 0 0 0 5 0 1 54.814 54.881 3 0.028584 15791 20230619_1885_Aki_TMTPro18x_K_F5 49.418 31.554 122910 109670 128260 123770 112640 146620 137600 144710 163030 138650 142780 136800 149800 120250 137160 157600 151420 138470 113760 100500 129620 124200 119090 146450 138110 147760 163770 140430 147710 138480 152040 126570 140590 156660 144650 131770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111610000 4031 239 3841 7474 6122 6122 1 9606 Homo sapiens -0.005862425476038879 DIDTLRDPGSQLR Unmodified 1484.7583 0.75831975 3435 Q59EZ3;P11717;A0A7I2V381;A0A7I2YQS7 IGF2R Cation-independent mannose-6-phosphate receptor yes no 0 0 1 4.5 0.5 1 1 44.527 44.588 3 3.5316E-06 11560 20230619_1883_Aki_TMTPro18x_K_F4 135.65 116.33 111990 85204 92242 111420 117300 120080 110660 119710 141090 101950 112620 122480 119530 98113 112740 108410 145890 115900 103360 78242 95822 110450 119700 120760 112900 121840 140770 104670 117260 122560 121480 102570 116540 109220 139060 110120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133600000 4032 3435 3842 7475;7476 6123;6124 6123 2 9606 Homo sapiens 0.035330923614537824 DIEAMDPSILK Unmodified 1230.6166 0.61658946 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;A0A994J5C5;A0A994J855;A0A994J5Y2;A0A994J7T3;I3L0L3 NSF Vesicle-fusing ATPase yes no 0 0 0 3.5 1.12 1 1 1 1 59.811 59.835 3 4.8406E-07 18265 20230619_1883_Aki_TMTPro18x_K_F4 141.88 121.45 88826 68255 82826 85852 72795 93298 96165 97383 110590 106700 100670 105670 108600 93206 109440 114240 110560 125340 82058 62650 84528 85367 77160 93833 96058 99439 111470 107310 104170 106880 110630 97692 111370 115070 105880 118870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221270000 4033 1435 3843 7477;7478;7479;7480 6125 6125 1 9606 Homo sapiens 0.010505830147849338 DIEAQLQHAGLR Unmodified 1349.7052 0.70516197 3358 O95479;O95479-2 H6PD GDH/6PGL endoplasmic bifunctional protein;Glucose 1-dehydrogenase;6-phosphogluconolactonase yes no 0 0 0 5 0 1 47.912 47.989 3 0.0017444 12948 20230619_1885_Aki_TMTPro18x_K_F5 80.31 53.421 142240 108310 121770 134360 140330 155110 145670 136720 178230 111040 108690 98934 108120 85169 118730 119700 126250 93652 131310 99408 125760 133800 144540 154850 147500 140290 176770 113380 114740 100610 110880 90134 120950 118290 120490 89346 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41575000 4034 3358 3844 7481 6126 6126 1 9606 Homo sapiens 0.044297593694636817 DIEDVFYK Unmodified 1027.4862 0.48622722 3140 J3KTL2;Q07955;Q59FA2;Q07955-3;Q07955-2;A8K1L8;J3QQV5;J3KSW7 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 4.33 1.89 1 1 1 1 2 2 1 59.524 59.56 2;3 0.00015891 18225 20230619_1882_Aki_TMTPro18x_K_F3 172.14 139.73 871270 684130 681350 917530 762890 958310 840800 880850 1189400 1057700 1023400 1037800 1188500 1002900 874380 1281400 1135100 1258500 803980 628320 710740 907400 790120 963750 853840 909960 1185300 1059400 1064700 1053600 1193100 1050500 911340 1280700 1084400 1195200 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 737190000 4035 3140 3845 7482;7483;7484;7485;7486;7487;7488;7489;7490 6127;6128;6129;6130 6127 4 9606 Homo sapiens -0.02641644921891384 DIEEASLVK Unmodified 1002.5233 0.523341 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 0 2.5 0.5 1 1 50.658 50.719 2 7.0881E-05 14442 20230619_1882_Aki_TMTPro18x_K_F3 178.94 163.68 229950 181940 212020 194570 137620 167380 111900 114390 143120 231600 376760 409010 248980 298340 316020 314620 400540 398090 212450 166720 215540 195200 148410 170220 115740 123890 153310 233010 370240 403290 261940 311810 324840 320600 382400 377230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 330200000 4036 1958 3846 7491;7492 6131 6131 1 9606 Homo sapiens 0.02218026623870628 DIEEHLQR Unmodified 1038.5094 0.50942227 4688 Q9UNE7;Q9UNE7-2;H3BTA3 STUB1 E3 ubiquitin-protein ligase CHIP yes no 0 0 0 1.5 0.5 1 1 35.5 35.529 3 2.8552E-07 7888 20230619_1881_Aki_TMTPro18x_K_F2 183.9 105.58 84488 65544 74185 85178 88804 101550 89657 89511 117610 115490 127100 126700 126470 107040 101020 135210 140100 124680 78019 60179 76509 84593 91209 101160 91212 92967 118610 115680 129880 127470 127920 112520 105510 134740 133560 118590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148140000 4037 4688 3847 7493;7494 6132 6132 1 9606 Homo sapiens -0.00829206084586076 DIEEVSQGLLSLLGANR Unmodified 1812.9581 0.95814177 3158 K7EJH0;K7EMX1;K7EJV2;K7ESQ2;Q8NBT2;Q8NBT2-2;K7ERQ7;A0A0A0MSN0 SPC24 Kinetochore protein Spc24 yes no 0 0 0 8 0 1 67.122 67.141 3 0.00027928 20807 20230619_1888_Aki_TMTPro18x_K_F8 79.837 69.483 4458.9 3816.9 3811.5 3285 4297.1 2804.4 4443.3 4693.4 3648 4424.1 4300.7 3436.2 4771.5 3912 3726.1 4273.7 5205.7 4545.1 4119.2 3490.7 3927.4 3362.8 4412.2 2924.3 4449.3 4654.7 3792.7 4451.7 4396.4 3553 4805.2 4041.5 3891.5 4302.5 4961.9 4316.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2796800 4038 3158 3848 7495 6133 6133 1 9606 Homo sapiens 0.08418102518589876 DIELQIR Unmodified 885.49198 0.4919813 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;H0YI79;A0A994J6A0;A0A994J3G1;F8W1W3;B4DDQ3;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 0 3.5 0.5 1 1 48.713 48.772 2 0.0084502 13595 20230619_1882_Aki_TMTPro18x_K_F3 120.65 26.238 191590 125730 151680 221410 319000 370350 290530 280100 388290 237570 228000 201780 244460 228630 219400 252620 256420 241100 176640 115960 160440 217310 317750 360850 297210 291120 383290 241770 241990 207570 248050 236170 225760 252760 244880 229170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 577360000 4039 3212;3213 3849 7496;7497 6134 6134 1 9606 Homo sapiens 0.044654983804207404 DIELVMSQANVSR Oxidation (M) 1476.7242 0.72424243 648 F8VZJ2;A0A7I2V2K5;A0A024RB41;H0YHX9;A0A7I2V473;Q13765;E9PAV3-2;E9PAV3;F8W0W4;B4DDI8 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 1 0 4.5 0.5 1 1 47.748 47.806 2 0.00031104 12984 20230619_1883_Aki_TMTPro18x_K_F4 98.105 85.052 60957 53238 52302 68470 65421 67145 64286 66993 80815 80377 89882 83467 95684 78764 66868 108750 95464 102630 56322 48854 54138 67852 66891 68009 65402 68813 81766 80618 91956 84521 96107 82992 70318 108330 91113 97516 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91797000 4040 648 3850 7498;7499 6135 6135 387 1 9606 Homo sapiens 0.004949278782078181 DIELVMSQANVSR Unmodified 1460.7293 0.72932781 648 F8VZJ2;A0A7I2V2K5;A0A024RB41;H0YHX9;A0A7I2V473;Q13765;E9PAV3-2;E9PAV3;F8W0W4;B4DDI8 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 0 0 6 0.816 1 1 1 56.436 56.502 3 2.4339E-11 16614 20230619_1886_Aki_TMTPro18x_K_F6 187.62 23.91 149020 129340 145640 132740 117030 145580 142080 142170 173170 182910 174350 173910 208540 168370 153620 221050 200230 192210 137820 118440 147730 134060 124680 146190 142830 146550 174810 182410 180260 176840 209120 176650 160120 219470 191070 182900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1410300000 4041 648 3850 7500;7501;7502 6136;6137;6138 6137 3 9606 Homo sapiens 0.01739231740816649 DIENLRR Unmodified 914.49338 0.49337828 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7;B3KWP6;B7Z6P3;B3KP76 KTN1 Kinectin yes no 0 0 1 4.5 0.5 1 1 34.228 34.297 3 0.00199 7229 20230619_1883_Aki_TMTPro18x_K_F4 128.57 13.783 183050 150340 175680 169080 189330 180420 189020 198490 241420 225790 262500 262470 250950 207160 230880 242230 295470 252880 169210 137810 179190 169480 195440 182120 192300 202220 243750 227830 267800 262900 255550 217380 238730 243440 281790 240230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155380000 4042 380 3851 7503;7504 6139;6140 6139 2 9606 Homo sapiens 0.03271132469183158 DIENYIQDGKDDYKK Unmodified 1842.8636 0.86357268 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90 RAD50 DNA repair protein RAD50 yes no 0 0 2 6.5 0.5 1 1 52.224 52.299 4 0.0024194 14898 20230619_1886_Aki_TMTPro18x_K_F6 72.417 55.136 90214 83232 84183 88345 74898 91080 104490 104940 90084 112190 115570 107960 109580 84085 118960 116510 106970 109600 83439 76223 85930 88898 79343 92222 103230 106430 93669 112770 117110 109020 112380 89276 120130 116190 102480 104170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119390000 4043 4309 3852 7505;7506 6141 6141 1 9606 Homo sapiens -0.02414456023461753 DIEQIAEFLEQSVK Unmodified 1647.8356 0.83556702 1840 B4DUE1;A0A8V8TQC8;M0R0Q7;Q59HG7;F5GZ28;B4DM52;A0A8V8TP03;A0A8V8TNZ9;A0A8V8TPH8;A0A8V8TQQ7;A0A8V8TQC4;P18858-2;P18858-3;P18858 LIG1 DNA ligase;DNA ligase 1 yes no 0 0 0 3.5 1.12 1 1 1 1 66.86 66.885 3 0.00077626 20940 20230619_1885_Aki_TMTPro18x_K_F5 84.753 65.43 15691 12806 11808 8367.6 8449.5 9615.9 12433 12078 16913 14356 13963 11198 15174 11379 11466 19786 15484 15151 14479 11693 12247 8862.7 9169.4 9702.6 12443 12223 16850 14296 14493 11543 15268 12180 11993 19461 14773 14441 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 12482000 4044 1840 3853 7507;7508;7509;7510 6142 6142 1 9606 Homo sapiens 0.037562657871148986 DIEREDIEFICK Unmodified 1565.7396 0.73955814 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 1 3.33 1.25 1 2 2 1 53.793 53.827 3;4 0.00064238 15943 20230619_1880_Aki_TMTPro18x_K_F1 94.122 77.868 369790 255960 348400 386560 338440 412430 336350 382330 395010 398760 428520 406850 422870 365940 345210 480060 480660 502000 341440 235520 355760 379790 352720 414140 341370 393030 400510 402350 437580 411550 428250 384900 360630 481360 458730 476490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2991299999.9999995 4045 3622 3854 7511;7512;7513;7514;7515;7516 6143;6144;6145 6143 3 9606 Homo sapiens -0.020682053245991483 DIETFYNTSIEEMPLNVADLI Unmodified 2426.1563 0.15630881 2105 P60842;A8K7F6;A8K088;B4DNH2 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 0 0 5 0 1 70.015 70.058 3 0.061935 22164 20230619_1885_Aki_TMTPro18x_K_F5 38.888 24.118 0 0 0 1724.1 1357.7 1124.7 1686.6 1296.4 0 0 907.79 1896.3 1664.1 835.16 892.63 0 1072.7 0 0 0 0 1584.2 1303.8 1183.4 1626.8 1282.1 0 0 928.95 1799.1 1632.8 852.69 925.46 0 1017.2 0 0 0 0 1 1 1 1 1 0 0 1 1 1 1 1 0 1 0 2439400 4046 2105 3855 7517 6146 6146 1 9606 Homo sapiens 0.00027690804745361675 DIFAMDDKSENEPIENEAAK Oxidation (M) 2281.0056 0.0056218275 4365 Q96I99;Q3ZCW5;E9PDQ8;Q96I99-2;B7Z2D5 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 1 1 2.5 0.5 1 1 51.87 51.922 4 1.8759E-07 15298 20230619_1881_Aki_TMTPro18x_K_F2 113.54 107.31 29091 24031 29962 30266 38796 35459 35904 37445 35178 37253 38402 37306 41104 33339 37338 38652 35904 36721 26908 22052 30491 30128 39450 35525 36357 38099 36035 37648 39364 37743 41667 34807 37962 38650 34372 34896 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85750000 4047 4365 3856 7518;7519 6147 6147 2748 1 9606 Homo sapiens -0.08364075854024122 DIFDQLAK Unmodified 948.49165 0.49164694 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 6 0.816 1 1 1 59.77 59.823 2 0.00083094 18026 20230619_1886_Aki_TMTPro18x_K_F6 155.1 88.422 378210 295900 305640 338360 300340 378770 344150 348620 485860 446590 417860 383350 467680 395830 376650 470090 416930 432870 349070 271330 316680 338790 314390 379220 348800 360780 484270 444400 433740 392590 471440 411870 387350 468870 398640 411480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 506560000 4048 1104 3857 7520;7521;7522 6148;6149 6149 2 9606 Homo sapiens 0.01534078660574778 DIFPYSENK Unmodified 1111.5186 0.51858998 3306 O75475;Q05CM9;O75475-3;O75475-2 PSIP1 PC4 and SFRS1-interacting protein yes no 0 0 0 5 1 1 1 53.181 53.201 2 8.5149E-12 15453 20230619_1883_Aki_TMTPro18x_K_F4 240 164.14 138780 116310 119450 144710 128270 133990 127990 130570 155030 150140 168340 149660 154610 133110 150450 160860 168830 168760 128200 106710 123210 143640 132560 136270 129950 134190 156920 150690 171360 151480 158050 139340 154130 161620 161350 160200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97510000 4049 3306 3858 7523;7524 6150;6151 6150 2 9606 Homo sapiens -0.03270857518896264 DIFQEIFDK Unmodified 1153.5655 0.56554017 3600 Q53GL5;P48735;P48735-2;Q13584;B4DSZ6;H0YL11 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] yes no 0 0 0 4.67 0.471 1 2 64.445 64.471 2;3 0.00020596 19932 20230619_1885_Aki_TMTPro18x_K_F5 106.16 89.529 172370 135740 155080 173110 173650 205620 192840 183960 216520 193510 202690 183670 191930 183680 206100 206540 195400 198730 159210 124590 159400 172140 179580 204900 194020 189690 218620 194860 208060 187000 197020 190590 208740 206770 187080 188820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 371780000 4050 3600 3859 7525;7526;7527 6152;6153;6154 6153 3 9606 Homo sapiens -0.0050999796776523 DIFQEIYDK Unmodified 1169.5605 0.56045479 274 V9HW78;B2R5M8;A0A024R3Y6;O75874;Q6FIA4;Q6FI37;Q0QER2;B4DXS4 HEL-216;IDH1 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 4 0 1 62.233 62.237 2 0.00019987 19266 20230619_1883_Aki_TMTPro18x_K_F4 120.09 62.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4051 274 3860 7528 6155 6155 1 9606 Homo sapiens -0.017543018303967983 DIFSEVGPVVSFR Unmodified 1450.7456 0.7456298 2592 B4DUD5;P33240-2;P33240;E9PID8;E7EWR4;B3V096;A0A0A0MT56 CSTF2 Cleavage stimulation factor subunit 2 yes no 0 0 0 7.67 0.471 1 2 63.109 63.138 2;3 0.00011843 19277 20230619_1887_Aki_TMTPro18x_K_F7 83.877 73.41 24420 19887 25957 26408 26701 30678 30512 27500 38164 24840 25824 26146 26279 24625 29592 31521 35911 26833 22592 18260 26258 26186 27793 30617 30763 28254 37910 25320 27109 26449 26997 25797 30388 31300 34236 25569 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103840000 4052 2592 3861 7529;7530;7531 6156;6157 6156 2 9606 Homo sapiens 0.03828680969218112 DIGAIAQVHAENGDIIAEEQQR Unmodified 2376.167 0.16696535 1284;4185 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q86U75 DPYSL2 Dihydropyrimidinase-related protein 2 no no 0 0 0 2.5 0.957 1 2 2 1 51.647 51.687 3;4 1.4545E-30 14890 20230619_1882_Aki_TMTPro18x_K_F3 198.64 185.6 338550 273260 331600 341980 320990 331080 346560 338580 368210 373070 410730 346670 357060 287470 392860 357430 338920 310040 312970 250760 337290 339630 334740 335880 348760 346360 375560 374320 416720 351320 367590 302210 395690 355580 324600 295090 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2035199999.9999998 4053 1284;4185 3862 7532;7533;7534;7535;7536;7537 6158;6159;6160 6159 3 9606 Homo sapiens 0.033928542940884654 DIGAIAR Unmodified 714.40244 0.40243801 4008 Q53SW3;Q9BPU6;E7EWB4 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 4.64 2.01 1 1 1 2 2 2 1 1 39.711 39.767 2 0.007123 9278 20230619_1886_Aki_TMTPro18x_K_F6 127.66 60.664 28989000 21007000 25971000 26700000 30146000 31027000 28910000 30314000 36470000 25321000 30478000 30525000 32368000 27981000 27535000 23801000 37777000 31107000 26763000 19288000 26696000 26555000 30952000 31032000 29457000 30882000 36450000 26038000 31630000 30662000 32761000 28733000 28624000 24411000 35999000 29492000 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 136640000000 4054 4008 3863 7538;7539;7540;7541;7542;7543;7544;7545;7546;7547;7548 6161;6162;6163;6164;6165;6166;6167;6168 6166 8 9606 Homo sapiens 0.033812884917210795 DIGFIKLD Unmodified 919.50148 0.50148335 3711 P62273;A0A087WTT6 RPS29 40S ribosomal protein S29 yes no 0 0 1 5.5 1.12 1 1 1 1 61.649 61.685 2 0.018535 18839 20230619_1886_Aki_TMTPro18x_K_F6 112.84 80.001 2550600 2567700 1946000 2466300 2102100 3073500 1746900 2687800 2346100 2908600 2252700 2025300 1834100 2854600 1320400 3016600 1394200 1933100 2357300 2348900 2032800 2507700 2170700 3052500 1803700 2774700 2356600 2901000 2294600 2125500 1869500 2918900 1365800 2963900 1337000 1845600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2610300000 4055 3711 3864 7549;7550;7551;7552 6169;6170 6170 2 9606 Homo sapiens 0.038512666659471506 DIGISDPQHR Unmodified 1136.5574 0.5574351 1511 A0A8V8TME4;A0A8V8TP68;A0A8V8TMV9;Q49AR9;A0A3B3ISP1;Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes no 0 0 0 3 0 1 35.888 35.945 3 0.00092387 7962 20230619_1882_Aki_TMTPro18x_K_F3 87.789 59.776 19555 16489 22503 24527 27303 26200 23819 29622 37286 28502 31133 31926 33733 22574 27398 26008 37623 32402 18108 15157 22692 24126 27873 26444 24644 29977 36957 28975 32338 31927 34015 23813 28523 26442 35862 30727 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22788000 4056 1511 3865 7553 6171 6171 1 9606 Homo sapiens -0.005381321645245407 DIGPEVVK Unmodified 855.47018 0.47018322 1097 P51659;A0A0S2Z4J1;B2R659;E7EPL9;A0A804HK65;A0A2R8YD50;P51659-2;P51659-3;B4DSD0;B4DDM5;A0A2R8Y7L2;B4DI68;E7ET17;B3KSP2;A0A804HIR1;Q59H27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 0 0 0 3.5 0.5 1 1 47.351 47.412 2 0.038681 12799 20230619_1883_Aki_TMTPro18x_K_F4 78.516 42.321 173400 123440 141350 138160 147930 188290 172510 167040 213490 177940 205330 208600 223130 197920 190790 265890 248970 259870 159970 113220 146380 139030 154130 186060 173750 172380 214710 180300 211830 210210 225760 208040 198210 265520 237730 246850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186240000 4057 1097 3866 7554;7555 6172 6172 1 9606 Homo sapiens 0.036666936318511034 DIHEELPK Unmodified 979.49746 0.4974606 219 A0A024R2Z6;Q9BVP2-2;Q9BVP2 GNL3 Guanine nucleotide-binding protein-like 3 yes no 0 0 0 2.5 0.5 1 1 41.538 41.608 3 0.0018337 10522 20230619_1881_Aki_TMTPro18x_K_F2 110.41 99.195 190420 113550 171080 187840 210280 192850 203790 176520 256190 188290 189240 170760 184490 176180 174810 201150 208300 187040 175630 104680 176040 183530 214950 194270 207350 181880 255200 189340 196970 174430 188190 182790 179910 200890 198830 177880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 194300000 4058 219 3867 7556;7557 6173;6174 6173 2 9606 Homo sapiens 0.006891771722280282 DIHFMPCSGLTGANLK Unmodified 1759.8386 0.83856068 3455 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 0 0 0 2 0 1 55.394 55.415 3 5.0085E-34 16771 20230619_1881_Aki_TMTPro18x_K_F2 257.81 0 102810 60387 103970 105850 82552 104990 106650 110930 115570 145820 111130 123040 151620 121490 99517 164730 146770 164380 94904 55719 105220 103100 88189 106260 106460 113820 117290 144750 116030 125860 150980 127730 105090 164600 140090 156070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 473110000 4059 3455 3868 7558 6175 6175 1 9606 Homo sapiens -0.010965056313580135 DIHLDLPSNNNLVSK Unmodified 1677.8686 0.86859848 3474 P18583-5;P18583-9;P18583;P18583-7;P18583-4;P18583-3;P18583-10;P18583-6;P18583-2;H7C1M2 SON Protein SON yes no 0 0 0 7 0 1 54.361 54.425 3 0.00029524 15504 20230619_1887_Aki_TMTPro18x_K_F7 99.927 80.173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4060 3474 3869 7559 6176 6176 1 9606 Homo sapiens 0.05677892629842063 DIHSGLIGPLLICR Unmodified 1562.8603 0.8602824 2794 CON__Q28107 yes yes 0 0 0 2 0 1 57.689 57.704 3 0.015253 17718 20230619_1881_Aki_TMTPro18x_K_F2 61.415 47.606 + 27674 26592 28723 26785 28711 35282 31129 29804 38387 28232 30775 30264 31275 26898 35639 32132 26429 33031 25625 24339 29084 27164 29924 34910 31468 30784 38358 28705 31965 30529 32104 28133 35639 32269 25422 31339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15008000 4061 2794 3870 7560 6177 6177 1 9606 Homo sapiens 0.10136667179540382 DIHTLAQLISAYSLVDPEK Unmodified 2112.1103 0.11028532 3327 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;O76094-2;Q71V07;O15302 HEL103;SRP72 Signal recognition particle subunit SRP72 yes no 0 0 0 2 0 1 65.149 65.156 3 3.813E-10 20874 20230619_1881_Aki_TMTPro18x_K_F2 122.44 107.83 6452 4193.7 5422.8 6453 7482.2 7865 6903.4 8087.1 7679.1 9145.9 8959.2 9926.1 11163 9472.1 8794.7 10786 10719 13838 5950.5 3861 5631 6346.1 7593.3 7848.7 7021.3 8269.1 7842 9206.8 9233.4 10024 11211 9861 9102.8 10981 10259 13099 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22283000 4062 3327 3871 7561 6178 6178 1 9606 Homo sapiens 0.09871458475527106 DIIACGFDINK Unmodified 1264.6122 0.61217279 401 P23381;A0A024R6K8;P23381-2;G3V3Y5;G3V3H8 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 0 0 7 0 1 59.956 60.002 2 0.00017778 17806 20230619_1887_Aki_TMTPro18x_K_F7 152.54 103.74 47039 39718 44029 50645 41092 48652 51148 46521 64373 65349 63743 68813 66755 56755 61996 78283 68963 78437 43481 36448 44980 50213 43236 49296 51387 48202 64821 65144 65595 69285 67818 60080 63605 78275 65982 74464 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16903000 4063 401 3872 7562 6179 6179 1 9606 Homo sapiens -0.009548814081426826 DIICQIAYAR Unmodified 1221.6176 0.61759251 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9;A0A2R8Y4A2;Q9BUV4;Q5T7N0 RPL5 60S ribosomal protein L5 yes no 0 0 0 1 0 1 55.467 55.467 2 4.8448E-05 16612 20230619_1880_Aki_TMTPro18x_K_F1 145.72 116.56 1154800 826020 952900 922520 988360 1035100 1029700 890020 1027400 1221400 1007800 757370 1068100 866530 876910 1210400 1157200 1181000 1065400 757540 984980 925570 1024800 1035300 1035700 928250 1047600 1202600 1035800 794540 1079100 909210 912390 1208000 1104600 1122000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4974200000 4064 1916 3873 7563 6180 6180 1 9606 Homo sapiens 0.01564842174320802 DIIFAIK Unmodified 818.49019 0.49019038 1402 A0A384MDR8;P11177-3;P11177-2;P11177 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes no 0 0 0 1.5 0.5 1 1 61.566 61.571 2 0.0074767 19068 20230619_1880_Aki_TMTPro18x_K_F1 124.89 57.852 205520 175590 182500 219000 205190 231110 238440 236660 264930 164090 157810 151880 161340 135510 197090 189610 190020 177390 189920 161090 187900 217730 212330 232870 239200 239480 263820 169510 167190 154350 166310 143190 199350 189010 181790 168660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175960000 4065 1402 3874 7564;7565 6181 6181 1 9606 Homo sapiens 0.0736848936246588 DIIGLAETGSGK Unmodified 1159.6085 0.60846762 633 Q53GJ1;Q9H4E3;A0A024RAS3;Q9H0S4-2;Q9H0S4;A4UCU0;B4DYP6 E4-DBP;hCG_27698;DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 0 0 0 5.5 0.5 1 1 55.83 55.9 2;3 1.1871E-06 16360 20230619_1886_Aki_TMTPro18x_K_F6 184.24 123.33 106860 87496 95763 105210 97874 121700 111140 103330 126860 122340 125310 121190 131940 107640 120190 134370 124810 124310 98730 80254 98311 105000 102000 121370 111770 107370 128290 122620 128900 122650 133850 112910 122760 134010 119360 118180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133890000 4066 633 3875 7566;7567 6182;6183 6183 2 9606 Homo sapiens 0.03504772089650032 DIIGVAETGSGK Unmodified 1145.5928 0.59281755 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8;A0A8V8TQ76;A0A8V8TRI2;H0YI52 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 0 0 4.5 0.5 1 1 51.209 51.261 3 0.0012649 14307 20230619_1885_Aki_TMTPro18x_K_F5 85.522 61.535 58901 57881 64206 59112 62614 72243 68775 64375 85865 68760 76217 65771 80307 54227 65759 75109 82078 82933 54573 52979 64732 59811 65362 71898 69511 66429 86064 69207 78741 66571 81063 57510 68075 75542 78380 78684 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172170000 4067 117 3876 7568;7569 6184 6184 1 9606 Homo sapiens 0.025844855726063543 DIIHDPGR Unmodified 921.46683 0.46682918 3734 P62917;E9PKZ0;G3V1A1;B4DVG7;E9PKU4 RPL8 60S ribosomal protein L8 yes no 0 0 0 3 0.816 1 1 1 34.552 34.608 3 0.00056673 7494 20230619_1881_Aki_TMTPro18x_K_F2 121.09 81.047 669840 521410 602060 638880 836450 812610 716440 742580 969290 724900 785020 682110 864710 607810 657000 877400 864190 727830 618670 478440 620810 637810 846810 807210 736990 762730 965320 732840 816560 692760 869550 644090 684330 868340 823900 693380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2460600000 4068 3734 3877 7570;7571;7572 6185;6186 6185 2 9606 Homo sapiens 0.002954435778633524 DIIHFFR Unmodified 946.50249 0.5024864 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2;Q05D78 MRE11A Double-strand break repair protein MRE11A yes no 0 0 0 2 0 1 54.045 54.073 3 0.0011323 16181 20230619_1881_Aki_TMTPro18x_K_F2 151.17 86.396 85121 79151 79809 93093 79871 92768 84793 92782 111720 99509 88776 87366 101080 82596 99741 108730 97199 94895 78735 72553 81596 92868 83185 93837 86060 94949 111390 99867 92708 89109 102690 86748 101360 108050 93008 90286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107400000 4069 229 3878 7573 6187 6187 1 9606 Homo sapiens 0.027095258255144472 DIILATDLAHHLR Unmodified 1486.8256 0.82561145 2411 E9PEF1;B4DIM1;Q8IW54;B3KT60;O00408-2;O00408-4;O00408-3;O00408;C9JPD5;H7C009;O00408-5 PDE2A cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 7.5 0.5 1 1 52.306 52.381 4 3.9018E-06 14660 20230619_1887_Aki_TMTPro18x_K_F7 135.6 99.315 12346 9692.1 9203.5 12522 6804.7 7767.6 10121 10333 11992 14332 14319 14463 14885 14122 14050 13937 16755 15758 11389 8897.9 9594.3 12349 7359.2 8275.5 10075 10493 12212 14269 14608 14659 15145 14566 14450 14113 15998 14951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75155000 4070 2411 3879 7574;7575 6188 6188 1 9606 Homo sapiens 0.10167167363056251 DIILSNDNQTATCSSYDDR Unmodified 2186.9386 0.93860489 2992 F8W8C1;Q6ZTA4;Q6ZTA4-2 TRIM67 Tripartite motif-containing protein 67 yes no 0 0 0 1.5 0.5 1 1 48.796 48.828 3 4.0681E-31 13920 20230619_1881_Aki_TMTPro18x_K_F2 224.19 215.48 30981 23509 36462 38371 36422 35838 42929 42885 58794 50568 47476 53500 61835 48925 44192 59406 62011 64217 28676 21645 36594 37486 37983 36587 43387 43531 58545 50799 49891 54012 61814 51199 46314 59749 59175 60935 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158020000 4071 2992 3880 7576;7577 6189 6189 1 9606 Homo sapiens -0.1073868634516657 DIILYVK Unmodified 862.51641 0.51640513 4151 Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;Q53FN7;Q7L1Q6-2;D3DN77;C9IZ80;B3KU41;H0Y503 BZW1;hCG_2022736 Basic leucine zipper and W2 domain-containing protein 1 yes no 0 0 0 8 0 1 59.444 59.486 3 0.014196 17598 20230619_1888_Aki_TMTPro18x_K_F8 81.958 22.753 33942 27332 29418 34815 28141 36683 33254 31206 37845 36106 34238 31400 35069 28637 31546 33398 37169 33826 31347 25086 30280 34556 29528 36812 33372 32401 38155 36096 35314 31997 35596 29896 32458 33506 35485 32136 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9195700 4072 4151 3881 7578 6190 6190 1 9606 Homo sapiens 0.07964758533944405 DIINEEEVQFLK Unmodified 1475.7508 0.75077476 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 3 0 1 62.192 62.221 3 7.9388E-06 19348 20230619_1882_Aki_TMTPro18x_K_F3 137.59 116.03 327400 232770 333720 322880 249180 253640 315180 358100 364530 338750 359910 499010 426830 373200 397800 437570 450020 492700 302540 213950 337090 317900 267140 264120 315770 358140 368360 348060 373420 494650 432250 392400 408120 441670 430370 467220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 351030000 4073 1637 3882 7579 6191 6191 1 9606 Homo sapiens 0.031929400411627284 DIISDTSGDFR Unmodified 1224.5622 0.5622457 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;A6NMY6;H0YMU9;H0YL33;H0YM50;B3KRQ1;H0YNB8;H0YKS4;H0YN28;H0YNP5;H0YNA0 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 2.5 0.5 1 1 50.361 50.425 2 3.9104999999999997E-50 14631 20230619_1881_Aki_TMTPro18x_K_F2 322.72 252.91 581410 387320 440610 561900 574150 801380 569110 545880 1081600 701760 723820 786620 734730 693040 710030 714010 724630 868010 535910 356290 462250 555600 588470 785670 589300 579510 1057400 704770 760200 791080 748970 718990 723320 725840 694170 822290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1266600000 4074 368 3883 7580;7581 6192;6193 6192 2 9606 Homo sapiens -0.041052928124372556 DIISDTSGDFRK Unmodified 1352.6572 0.65720872 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;A6NMY6;H0YMU9;H0YL33;H0YM50;B3KRQ1;H0YNB8;H0YKS4;H0YN28;H0YNP5;H0YNA0 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 1 5 0.707 1 2 1 48.269 48.334 2;3 3.0091E-17 13033 20230619_1885_Aki_TMTPro18x_K_F5 206.73 137.3 1133700 926170 950940 1018900 1307700 1349300 1078800 1093800 1923300 1285700 1397600 1300000 1270600 1230900 1313900 1260300 1381100 1440900 1046900 848820 986720 1025800 1325500 1334100 1126500 1140000 1888600 1291600 1452300 1316800 1304200 1273300 1338700 1276400 1321200 1366500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6591699999.999999 4075 368 3884 7582;7583;7584;7585 6194;6195 6195 2 9606 Homo sapiens -0.005013593412513728 DIISIAEDEDLR Unmodified 1387.6831 0.68308912 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 1 0 1 59.909 59.909 2 1.5404E-12 18460 20230619_1880_Aki_TMTPro18x_K_F1 196.48 156.48 161120 119610 134370 168370 152310 203450 160800 162630 188430 193420 208990 241060 223870 199620 196200 228840 201390 229180 148690 109940 139240 166350 157400 201990 162510 169820 191280 195290 214310 241050 226730 208740 200480 229440 192830 217570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1151100000 4076 150 3885 7586 6196 6196 1 9606 Homo sapiens 0.004754901103751763 DIITDPFK Unmodified 947.4964 0.49639797 4546 Q9HBK9-2;Q9HBK9 AS3MT Arsenite methyltransferase yes no 0 0 0 5 0 1 58.961 59.015 3 0.0025715 17513 20230619_1885_Aki_TMTPro18x_K_F5 94.302 43.696 34910 29454 36311 35902 30065 37083 39648 38140 40548 41879 38182 40559 43169 38319 40057 45684 43340 46410 32298 27017 36681 35754 31998 37426 39456 38995 41183 42081 39528 41155 43768 39989 41001 45815 41457 44062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18257000 4077 4546 3886 7587 6197 6197 1 9606 Homo sapiens 0.020549628033336376 DIKPDNFLMGIGR Oxidation (M) 1490.7551 0.75514863 1563 P48729-2;P48729;U3KPX3;A0A590UJ43;V9HW00;P48729-3;A0A5F9W493;Q6PJ06;B4DER9;Q05DL3;B4E1D9;E7ETM0;D6REM4;A0A590UK94 CSNK1A1;HEL-S-77p Casein kinase I isoform alpha yes no 0 1 1 1 0 1 55.34 55.34 3 0.056145 16564 20230619_1880_Aki_TMTPro18x_K_F1 48.704 34.586 108930 96865 119300 129220 128920 133860 129250 121690 129430 132020 133320 116070 135990 103880 123390 156460 119180 127050 100850 88917 120520 127870 133030 134740 130340 125470 132060 132390 136610 118270 138010 110370 125660 154640 114130 120960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132720000 4078 1563 3887 7588 6198 6198 1026 1 9606 Homo sapiens 0.02940125983081998 DIKPDNLLLDAK Unmodified 1353.7504 0.75038083 4707 Q9Y2H1-2;Q9Y2H1;H0YGN4;F5H277 STK38L Serine/threonine-protein kinase 38-like yes no 0 0 1 7 0 1 55.816 55.877 3 0.0098313 16106 20230619_1887_Aki_TMTPro18x_K_F7 70.26 43.876 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4079 4707 3888 7589 6199 6199 1 9606 Homo sapiens 0.08765565111980322 DILADLIPK Unmodified 996.58555 0.58554733 651;2984 F8W031;F8VP03;F8W0J2;F8VU34;O75390;A0A024RB75;B4DJV2;F8W4S1;F8VTT8;F8VWQ5;F8VR34 CS Citrate synthase, mitochondrial;Citrate synthase no no 0 0 0 6.67 0.471 1 2 63.712 63.749 2;3 0.00020548 19527 20230619_1887_Aki_TMTPro18x_K_F7 144.09 62.541 328640 286980 301860 357970 334570 402350 400090 415770 464910 418930 417850 402810 471060 365970 427220 464920 420970 473340 303810 263270 309800 356230 347060 403680 401540 423800 468030 422780 433180 408590 476740 384180 435080 465960 403210 449300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2021299999.9999998 4080 2984;651 3889 7590;7591;7592 6200;6201 6201 2 9606 Homo sapiens 0.08711797762862261 DILADVNHPFVVK Unmodified 1465.7929 0.79291434 2680 B7Z2K7;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;E9PMM7;E9PAN7 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 yes no 0 0 0 8 0 1 58.465 58.511 3 0.034215 17184 20230619_1888_Aki_TMTPro18x_K_F8 56.414 37.634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4081 2680 3890 7593 6202 6202 1 9606 Homo sapiens 0.07864960240181063 DILAQSPAAEPLK Unmodified 1351.7347 0.73473076 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;A0A7I2V3I5;A0A7I2V2T9;A0A7I2V3J7;A0A7I2V682;Q8TAS6 LAMB1 Laminin subunit beta-1 yes no 0 0 0 5.5 0.5 1 1 54.618 54.69 3 0.019216 15746 20230619_1885_Aki_TMTPro18x_K_F5 59.248 36.369 63918 47487 54872 70756 52729 59648 67365 67767 66448 86322 85375 83174 97692 74768 72509 98965 100930 107030 59000 43676 56563 69362 55347 61324 67066 69181 68592 86097 87205 84320 98078 78746 75890 99421 96334 101550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98998000 4082 3015 3891 7594;7595 6203 6203 1 9606 Homo sapiens 0.07293278594943331 DILCGAADEVLAVLK Unmodified 1585.8385 0.83854391 3312 O75643;A0A494C1A5;O75643-2 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 8 0 1 66.569 66.588 3 0.0054868 20568 20230619_1888_Aki_TMTPro18x_K_F8 63.185 47.984 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4083 3312 3892 7596 6204 6204 1 9606 Homo sapiens 0.06905817640290479 DILDEEK Unmodified 860.41273 0.41272792 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;B4E263;A2VDI1;B3KWS1;Q8N7L7;B7ZAU8 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 1 0 1 48.389 48.389 2 0.0060433 13701 20230619_1880_Aki_TMTPro18x_K_F1 136.11 41.706 115430 79967 94621 111160 122910 137480 129070 123530 149970 146540 141530 133780 154710 124010 115620 171790 181330 150020 106470 73511 98391 109980 125680 136670 130380 127760 151310 146510 146080 136140 155660 130780 122180 170480 172640 142830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49446000 4084 2332 3893 7597 6205 6205 1 9606 Homo sapiens -0.023061933643703014 DILELQDDR Unmodified 1115.5459 0.54586736 4796 yes no 0 0 0 1.5 0.5 2 2 48.225 48.261 2 0.0031587 13547 20230619_1881_Aki_TMTPro18x_K_F2 99.7 62.151 + 1310300 932970 1084400 1096600 1601500 1857200 1577900 1421900 1891800 1597400 1639700 1662300 1674800 1485600 1443500 1781900 1751700 1593800 1208900 856050 1128600 1103800 1623600 1810000 1600900 1487000 1899000 1608100 1695700 1678700 1698000 1553300 1490800 1774500 1672000 1516400 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 2019499999.9999998 4085 4796 3894 7598;7599;7600;7601 6206;6207;6208 6208 3 9606 Homo sapiens -0.007283739785179932 DILETHLR Unmodified 995.53999 0.53999412 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4 0 1 42.883 42.927 3 3.6978E-05 10791 20230619_1883_Aki_TMTPro18x_K_F4 176.09 123.68 110500 78620 97518 112530 97006 116660 113950 108220 114660 217300 226720 263670 261650 216330 153760 266260 281230 258830 101990 72288 100240 110860 101340 117430 114020 114090 121650 214980 228960 263810 260830 227330 165890 266010 267690 246000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 459220000 4086 3758 3895 7602 6209 6209 1 9606 Homo sapiens 0.04204572300477594 DILIACR Unmodified 859.45857 0.45857268 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;B4DSR0;A0A804HJI0 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 6.5 0.5 1 1 46.679 46.764 2 0.0073036 12102 20230619_1887_Aki_TMTPro18x_K_F7 126.24 63.265 459080 396300 435290 464150 382350 483600 500350 467730 565880 486350 447670 410640 477490 424590 474300 554530 531800 536610 424470 363340 443660 463510 405070 487090 499580 479530 567910 488480 466040 421120 486510 444390 485980 553900 508300 509840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 552170000 4087 1723 3896 7603;7604 6210;6211 6211 2 9606 Homo sapiens 0.02322173336870037 DILIDPIR Unmodified 953.55458 0.55458155 4199 Q86XP3;Q86XP3-2;B3KTL4;B3KX23;T2DQ69 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 0 0 4 0 1 56.326 56.335 2 0.0022182 16773 20230619_1883_Aki_TMTPro18x_K_F4 130.22 63.228 144890 126200 133600 152450 132360 163050 155870 165090 205780 175160 166830 169680 182930 157300 186240 175400 160380 186110 133940 115740 136780 151950 138450 164090 157330 168760 205210 176390 173760 172060 186330 163650 187850 176620 153880 176560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178510000 4088 4199 3897 7605 6212 6212 1 9606 Homo sapiens 0.07594644448613508 DILIQYDR Unmodified 1034.5397 0.53965977 3200 M0R210;P62249 RPS16 40S ribosomal protein S16 yes no 0 0 0 4 0.816 1 1 1 51.239 51.297 2 0.00039615 14548 20230619_1883_Aki_TMTPro18x_K_F4 164.96 107.78 1648500 1424700 1575200 1653300 1631700 1836800 1795500 1886800 2160300 1844800 1748200 1535300 1730000 1462500 1737100 1888300 1891100 1751300 1524300 1306100 1607600 1653800 1695600 1844700 1812200 1922300 2163200 1857800 1811100 1571400 1766900 1533800 1775600 1882700 1806900 1665300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2518200000 4089 3200 3898 7606;7607;7608 6213;6214;6215 6215 3 9606 Homo sapiens 0.023771525806068894 DILLIGHR Unmodified 935.55525 0.55525025 1008 A0A0C4DGP0;Q9UKF7-2;Q9UKF7 PITPNC1 Cytoplasmic phosphatidylinositol transfer protein 1 yes no 0 0 0 8 0 1 46.649 46.697 3 1.0844E-05 12144 20230619_1888_Aki_TMTPro18x_K_F8 122.13 78.882 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4090 1008 3899 7609 6216 6216 1 9606 Homo sapiens 0.08489483888331506 DILLQQQQQLGHGGPEAAPR Unmodified 2155.1134 0.11341363 4175 Q7Z5L9-2;Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes no 0 0 0 5.5 0.5 1 1 46.594 46.674 3 6.119799999999999E-80 12442 20230619_1886_Aki_TMTPro18x_K_F6 327.06 294.79 141250 137170 138520 141740 96840 119780 138470 139730 134430 163660 184230 162240 166690 164110 163710 184050 183160 188550 130750 125570 140350 142600 105070 123300 137200 142040 139200 164010 185780 164940 170680 170190 167710 184840 175100 179020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 490580000 4091 4175 3900 7610;7611 6217;6218 6218 2 9606 Homo sapiens 0.08206146372867806 DILLRPELEELR Unmodified 1494.8406 0.84059282 311 P00387-3;P00387;P00387-2;A0A8J8YWN6;A0A8I5KR71;A0A024R4X0;A0A8I5KW26;A0A8J8Z3C6;A0A8I5QKX1;Q6ZVI6;A0A8I5KYU1;A0A087WZB1 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form;NADH-cytochrome b5 reductase yes no 0 0 1 4 0.816 1 1 1 56.202 56.237 3 0.022809 16919 20230619_1882_Aki_TMTPro18x_K_F3 62.081 39.202 389790 317210 359640 361640 386330 427150 425990 393790 456270 418630 412820 389420 458150 360290 392520 485470 440550 417650 360190 290810 368280 362530 400290 426280 428080 405310 461420 420990 427420 395930 462890 379300 403460 481780 420890 397490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1595599999.9999998 4092 311 3901 7612;7613;7614 6219 6219 1 9606 Homo sapiens 0.11296614440448138 DILNPDSSMETSPDFFF Oxidation (M) 1976.835 0.83497467 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8 IFI16 Gamma-interferon-inducible protein 16 yes no 0 1 0 2.5 1.12 2 2 2 2 67.203 67.218 2;3 1.8294E-09 21428 20230619_1882_Aki_TMTPro18x_K_F3 142.08 137.38 7581.1 5987.1 6695.8 10811 26803 23893 18475 20534 19292 15756 16825 13256 18898 15863 18192 22793 16560 18871 7001.8 5489.4 7201.4 10673 25980 23091 19118 21055 19517 16115 17450 13698 19186 16642 18449 22559 15876 17957 4 3 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 86465000 4093 2829 3902 7615;7616;7617;7618;7619;7620;7621;7622 6220;6221;6222;6223 6222 1685 4 9606 Homo sapiens -0.1143694171489642 DILNPDSSMETSPDFFF Unmodified 1960.8401 0.84006005 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8 IFI16 Gamma-interferon-inducible protein 16 yes no 0 0 0 2 0.816 2 2 2 68.072 68.09 2;3 1.0915E-06 21745 20230619_1882_Aki_TMTPro18x_K_F3 88.507 82.965 1767.1 2508.6 3049 2909.6 5773.4 9873.1 6268.5 6318.9 8919.9 6317.9 5114.9 5023.2 5119.6 6375.4 7249.9 9855.3 6583.4 4991.3 1644.1 2296.5 3038.4 2958.6 5822.9 9361.6 6364.7 6690.5 8780.1 6210.5 5431.2 5214.5 5343.1 6699.2 7312.5 9569 6294.4 4798.1 2 2 3 2 3 3 3 3 3 2 3 3 3 3 3 3 3 3 37697000 4094 2829 3902 7623;7624;7625;7626;7627;7628 6224;6225 6225 2 9606 Homo sapiens -0.1019263785228759 DILQNVFK Unmodified 975.53893 0.53893149 635 A0A024RAV2;P46063;F8WA66;F8WD97;F5H4P4;F5H3W0;F5H2L2 RECQL ATP-dependent DNA helicase Q1 yes no 0 0 0 1 0 1 61.336 61.336 2 0.0027265 19012 20230619_1880_Aki_TMTPro18x_K_F1 131.06 66.024 171020 140930 171710 179420 168390 226630 217910 201880 258560 99232 94019 73015 85018 71896 145600 97062 84838 72290 158150 129340 174460 178630 176850 224850 217920 205240 253980 105320 103820 75463 89959 75520 143370 95916 81673 68969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96470000 4095 635 3903 7629 6226 6226 1 9606 Homo sapiens 0.05018357931567152 DILQSCQTSEECELAR Unmodified 1937.8459 0.84589048 2243 B2R7D2;Q9UNW1;B4E394;Q9UNW1-4 MINPP1 Multiple inositol polyphosphate phosphatase 1 yes no 0 0 0 2 0 1 49.28 49.338 2 4.1034E-09 14135 20230619_1881_Aki_TMTPro18x_K_F2 137.59 123.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4096 2243 3904 7630 6227 6227 1 9606 Homo sapiens -0.0855186261221661 DILSFDK Unmodified 836.42798 0.42798405 3876 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 0 5 0.816 1 1 1 56.808 56.854 2 0.0072992 16610 20230619_1885_Aki_TMTPro18x_K_F5 126.28 54.044 145520 139030 149480 155640 176860 191990 187580 175240 201970 193630 178960 133910 172670 123900 182970 139830 125840 120050 134730 127370 151980 156330 181770 191040 188900 180630 204080 192920 184170 138370 176670 129130 182480 139330 120920 114260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 128280000 4097 3876 3905 7631;7632;7633 6228;6229 6228 2 9606 Homo sapiens 0.003227182234695647 DIMAEIYK Oxidation (M) 997.47903 0.47903335 226 P07858;E9PHZ5;A0A024R374;A8K2H4;B4DL49;A0A7P0NGZ6;A0A7I2YQK9;A0A7I2V668;E9PQM1;A0A7I2V440;E9PR21;E9PSG5;A0A7I2V4Z9;B4DMY4;B3KUJ8;Q6LAF9;A0A7I2V367 CTSB Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes no 0 1 0 4.5 0.5 1 1 50.263 50.317 2 0.014653 14106 20230619_1883_Aki_TMTPro18x_K_F4 89.698 43.132 237540 203750 200570 237190 335620 323020 382150 362340 524570 299080 329980 311850 323580 269910 333180 356590 313340 318430 219430 186800 209150 237960 339080 321120 386490 365640 517760 306470 347350 314860 330940 284340 337680 354760 300030 302830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 266440000 4098 226 3906 7634;7635 6230;6231 6230 135 2 9606 Homo sapiens -0.019807007939675714 DIMAEIYK Unmodified 981.48412 0.48411873 226 P07858;E9PHZ5;A0A024R374;A8K2H4;B4DL49;A0A7P0NGZ6;A0A7I2YQK9;A0A7I2V668;E9PQM1;A0A7I2V440;E9PR21;E9PSG5;A0A7I2V4Z9;B4DMY4;B3KUJ8;Q6LAF9;A0A7I2V367 CTSB Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes no 0 0 0 5.5 0.5 1 1 58.349 58.411 3 0.01112 17264 20230619_1885_Aki_TMTPro18x_K_F5 72.547 40.416 113410 92444 115970 122400 113030 152340 151270 170330 219820 159940 158850 167770 150920 141720 168460 193320 160160 210730 104880 84879 117650 121550 118980 152060 152380 172370 217410 162520 165600 169130 155240 149750 170700 194320 153670 199780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 209830000 4099 226 3906 7636;7637 6232;6233 6232 2 9606 Homo sapiens -0.007363969313587404 DIMEDTIEDKLDTK Unmodified 1664.7815 0.78148254 1274 P61764-2;P61764;A0A1B0GVQ5;A0A1B0GWF2;A0A1B0GTP9;A0A0D9SG72;A0A2R8Y5D4;B7Z2V7;B7Z1V5;B7Z3F4;Q59GC9 STXBP1 Syntaxin-binding protein 1 yes no 0 0 1 3.5 0.5 1 1 60.737 60.753 3 0.0009995 18637 20230619_1883_Aki_TMTPro18x_K_F4 85.42 71.741 76642 70450 79187 83285 59186 59875 65110 61912 64290 89112 86633 84911 89631 78524 93555 95076 93333 94160 70942 64583 79928 82770 63155 62421 65358 63896 66549 88427 87982 86171 91572 82083 95060 95227 89308 89440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 93158000 4100 1274 3907 7638;7639 6234 6234 1 9606 Homo sapiens -0.0243169442674116 DIMEIEGEPAPDHR Unmodified 1607.725 0.72497071 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 0 1 0 1 46.194 46.194 3 1.1759E-10 12789 20230619_1880_Aki_TMTPro18x_K_F1 134.06 121.23 24442 15316 20389 24227 23849 25946 28681 27255 31795 26856 31062 32524 33464 28582 25964 31526 34622 32027 22537 14108 21129 23743 24634 26124 28723 27750 32165 27342 32012 32630 33730 29764 27041 31648 33025 30424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31450000 4101 1566 3908 7640 6235 6235 1 9606 Homo sapiens -0.054582774727350625 DINAVAASLR Unmodified 1028.5615 0.56145784 4151 Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;Q53FN7;Q7L1Q6-2;D3DN77;C9IZ80;B3KU41;C9JFN4 BZW1;hCG_2022736 Basic leucine zipper and W2 domain-containing protein 1 yes no 0 0 0 7.5 0.5 1 1 50.942 51.019 2 4.5487E-05 14044 20230619_1887_Aki_TMTPro18x_K_F7 155.11 102.63 726140 587540 636560 672610 687180 875590 763350 723700 1021200 504600 424900 383980 469780 364800 533050 486700 471240 374810 670710 538680 655250 674950 713410 866230 772620 743990 1000500 519280 465910 395000 481060 383490 537220 481090 450810 357540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 456860000 4102 4151 3909 7641;7642 6236;6237 6236 2 9606 Homo sapiens 0.04831957329179204 DINAYNCEEPTEK Unmodified 1581.6617 0.66170175 3527 V9HWC7;P30041 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 0 3 0.816 1 1 1 45.174 45.241 3 3.2768E-06 12193 20230619_1881_Aki_TMTPro18x_K_F2 132.97 120.82 198740 122480 172050 163260 204680 235740 211220 209890 248700 244650 241560 257240 312040 245140 243670 323570 308590 298210 183280 112600 177460 162470 210380 232220 213730 217050 251100 245840 251320 260270 312920 257470 252990 322230 294550 283550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3688199999.9999995 4103 3527 3910 7643;7644;7645 6238 6238 1 9606 Homo sapiens -0.1058626298067793 DINELNLPK Unmodified 1054.5659 0.56587452 305 A0A024R4T4;P61081 UBE2M NEDD8-conjugating enzyme Ubc12 yes no 0 0 0 6 0 1 54.165 54.242 3 0.00015995 15706 20230619_1886_Aki_TMTPro18x_K_F6 111.46 43.439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4104 305 3911 7646 6239 6239 1 9606 Homo sapiens 0.04077421752072041 DINESDEVEVYSR Unmodified 1553.6845 0.68454569 1771 A0A8I5KT56;Q06787-6;R9WQY1;A8MQB8;A0A8I5KZ21;G3V0J0;X5D907;Q06787-5;Q06787-4;Q06787-7;Q06787-2;Q06787-8;A0A087WXI3;A0A087WVL8;A0A8I5KS01;X5DQX7;W5ZQ92;A0A087WY29;R9WNI0;A0A8I5KTZ9;Q06787-3;Q06787-9;Q06787;A0A0K0MJ24;Q06787-11;Q06787-10;A0A8I5KYA7;R9WPL0;Q8IXW7 FMR1 Fragile X mental retardation protein 1 yes no 0 0 0 1 0 1 46.194 46.194 2 7.315799999999999E-21 12793 20230619_1880_Aki_TMTPro18x_K_F1 227.31 201.27 24657 19517 27508 26988 29944 33639 37483 31000 39293 34562 36121 39786 39825 36871 34333 44624 42174 41951 22817 17931 27750 26724 31101 33442 37388 31963 39788 34914 37397 40058 40298 38516 35498 44540 40274 39874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67859000 4105 1771 3912 7647 6240 6240 1 9606 Homo sapiens -0.07014920591518603 DINLQDEDWNEFNDINK Unmodified 2120.9287 0.92869214 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 2.5 0.5 1 1 62.033 62.053 3 2.9233E-06 19287 20230619_1882_Aki_TMTPro18x_K_F3 104.78 95.848 54893 51013 57037 55699 55831 63622 65122 58733 76611 63799 57808 70781 67821 65726 71109 69508 72969 71534 50818 46728 57743 55996 58356 63636 65455 60496 76637 64458 60749 71317 69126 68126 72341 69919 69788 67927 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124510000 4106 1863 3913 7648;7649 6241 6241 1 9606 Homo sapiens -0.08693506288227582 DINQEVYNFLATAGAK Unmodified 1752.8683 0.86826413 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;A0A7I2V614;A0A7I2V538;A0A7I2V6A6;A0A7I2V3C8;A0A7I2V5W7;A0A7I2V4I8 ACO2 Aconitate hydratase, mitochondrial yes no 0 0 0 3.67 3.09 1 1 1 64.844 64.853 3 1.8606E-14 20455 20230619_1880_Aki_TMTPro18x_K_F1 159.18 146.04 40613 31886 27588 38771 41607 49262 37713 47392 51096 55708 56118 47339 52543 49250 47166 63875 58338 81807 37445 29255 29390 38711 42091 48964 38678 48717 51528 55599 57113 48555 53525 51541 48776 64888 55871 77424 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 297920000 4107 1050 3914 7650;7651;7652 6242;6243 6242 2 9606 Homo sapiens 0.021944729099914184 DINSVAIAPNDK Unmodified 1255.6408 0.64083038 3820 Q12788;A0JLS5;J3KNP2 TBL3 Transducin beta-like protein 3 yes no 0 0 0 5 0 1 48.883 48.959 3 0.00070388 13287 20230619_1885_Aki_TMTPro18x_K_F5 91.62 76.355 54948 43907 50522 51418 64173 57339 64017 46377 59997 54098 52815 46449 64918 46124 62913 57276 47739 52054 50768 40267 51889 51391 65451 57333 64384 48399 61084 54062 55037 47520 65693 48223 63142 57108 45853 49481 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171320000 4108 3820 3915 7653 6244 6244 1 9606 Homo sapiens 0.023235594926518388 DINTFSMR Unmodified 982.45422 0.45421558 2138 A8K9K6;O00567;A0PJ92;A0A494C128;Q5JXT2 NOP56 Nucleolar protein 56 yes no 0 0 0 6.5 0.5 1 1 47.193 47.277 2 0.00085807 12337 20230619_1887_Aki_TMTPro18x_K_F7 154.49 106.64 174290 150720 160160 168290 175600 185690 181180 173210 232120 183100 196510 175820 186580 160730 206360 194210 220400 201740 161110 138130 164140 168790 181380 186230 183890 178110 232010 184430 202770 178410 191730 168090 210190 195100 210620 191600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116730000 4109 2138 3916 7654;7655 6245;6246 6246 2 9606 Homo sapiens -0.03771335876695048 DINTFVGTPVEK Unmodified 1318.6769 0.67688153 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 6.5 0.5 1 1 55.217 55.293 3 0.00012725 16145 20230619_1886_Aki_TMTPro18x_K_F6 107.53 80.56 148770 128810 168220 150400 107860 130550 151320 126960 162330 172290 153120 149350 194000 149380 153340 177890 170180 161420 137770 118090 168260 149940 118000 133460 150440 131280 164500 171010 159290 152650 194670 155680 157700 177330 162610 153530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167960000 4110 3588 3917 7656;7657 6247;6248 6247 2 9606 Homo sapiens 0.03029016669529483 DIPGLTDTTVPR Unmodified 1283.6721 0.67213051 1910 Q96DV6;A2A3R6;P62753;A2A3R5;Q9BZU1 RPS6 40S ribosomal protein S6 yes no 0 0 0 4.8 0.748 2 2 1 52.554 52.602 2;3 1.1509E-09 15101 20230619_1883_Aki_TMTPro18x_K_F4 171.05 119.79 192790 162520 175190 185940 162460 180760 179300 187180 178730 189560 173960 184940 257380 151990 139310 241780 209000 217150 178170 148990 179290 185850 170230 183370 179890 190850 182140 191230 182310 186940 254020 162900 148140 239800 199350 206480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2449200000 4111 1910 3918 7658;7659;7660;7661;7662 6249;6250;6251 6249 3 9606 Homo sapiens 0.04164132526739195 DIPLGIR Unmodified 782.46504 0.46503826 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;B4DG89 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 0 7 0 1 49.058 49.142 2 0.0080364 13197 20230619_1887_Aki_TMTPro18x_K_F7 107.49 28.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4112 534 3919 7663 6252 6252 1 9606 Homo sapiens 0.0651043455989111 DIPNENELQFQIK Unmodified 1586.794 0.79403655 1172 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;Q68DI0;A0A087X253;B4DWG4;B4E261;Q96EL6;B4DIL5 AP2B1;DKFZp781K0743 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 4 0.816 1 1 1 59.149 59.177 3 5.1053E-05 17981 20230619_1883_Aki_TMTPro18x_K_F4 111.79 86.075 147110 107630 139270 152460 112180 135110 145270 131730 167000 162450 166820 156480 180660 138630 163990 207120 183950 193330 135880 98942 141810 150020 119680 137820 145240 135730 168890 162370 171700 158660 183070 147280 168400 206120 175870 183740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 386020000 4113 1172 3920 7664;7665;7666 6253;6254 6254 2 9606 Homo sapiens 0.02411129818460722 DIPNMFMDSAGSVSK Oxidation (M) 1613.7065 0.70654346 1421 E5RHW4;A0A384ME54;O94905 ERLIN2 Erlin-2 yes no 0 1 0 7 0 1 57.778 57.83 3 0.038033 16942 20230619_1887_Aki_TMTPro18x_K_F7 44.045 32.069 46733 41910 44405 51763 43340 48547 52957 48387 55002 48776 49501 46434 54509 45266 54438 59550 53856 60338 43221 38439 45335 51419 45361 49335 52891 49482 55686 49218 51262 47246 55465 47500 55356 59638 51580 57277 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9480900 4114 1421 3921 7667 6255 6255 888 1 9606 Homo sapiens -0.07576155438982823 DIPSFER Unmodified 862.41848 0.418482 1850 Q5U0B3;R4GMR5;V9HW09;A0A8V8TQ44;P48556;K7EJR3;A0A8V8TPK1;A0A8V8TR48 PSMD8;HEL-S-91n 26S proteasome non-ATPase regulatory subunit 8 yes no 0 0 0 4 0 1 45.696 45.74 2 0.011243 12060 20230619_1883_Aki_TMTPro18x_K_F4 116.9 53.756 117940 76652 86065 112660 100850 133090 120090 132190 183490 139930 147310 172990 178820 144790 111810 178830 178110 206690 108670 70530 90502 111010 104480 132900 121870 135270 181770 142100 154280 173130 178350 152140 118910 180500 169970 195910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93109000 4115 1850 3922 7668 6256 6256 1 9606 Homo sapiens -0.0182305006204615 DIPVLVATDVAAR Unmodified 1338.7507 0.75071518 4199 Q86XP3;Q86XP3-2;B3KTL4;B3KX23;T2DQ69;B3KV84;B3KMI4 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 0 0 5.33 0.471 2 1 59.852 59.907 2;3 7.7309E-08 17854 20230619_1885_Aki_TMTPro18x_K_F5 150.69 125.77 60770 49973 54173 58826 54768 61326 70333 66592 73067 74397 69948 78037 76787 67690 72943 77842 71248 85993 56144 45827 55628 58730 57267 61951 70081 67884 74185 74867 72283 78669 77980 70705 74180 78505 68288 81536 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 103570000 4116 4199 3923 7669;7670;7671 6257;6258 6257 2 9606 Homo sapiens 0.09488984831841663 DIPVNPMCIYR Unmodified 1376.6581 0.65807712 2788 CON__P41361 yes yes 0 0 0 4.5 3.5 1 1 57.703 57.729 2 9.9635E-05 17553 20230619_1880_Aki_TMTPro18x_K_F1 137.95 97.602 + 83011 71808 75093 94613 122940 152410 111090 101670 206810 134120 176880 205910 115900 125710 324470 115490 156040 170530 76725 65913 77813 94332 123950 148500 115520 108260 203710 136170 180770 202810 130170 131660 315830 119990 151030 161340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115130000 4117 2788 3924 7672;7673 6259;6260 6259 2 -0.015185594975491767 DIPVNPMCIYR Oxidation (M) 1392.653 0.65299174 2788 CON__P41361 yes yes 0 1 0 7.5 0.5 1 1 51.701 51.777 2 0.0072594 14267 20230619_1888_Aki_TMTPro18x_K_F8 74.376 56.065 + 23299 18878 23263 26514 41810 45302 31701 30254 61687 34683 61498 61652 32013 36859 89544 33322 40690 47435 21542 17344 23933 26367 41746 44031 33449 32072 60977 35697 61901 60499 36354 38601 87040 34520 39451 44880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78979000 4118 2788 3924 7674;7675 6261 6261 1665 1 -0.02762863360180745 DIPVTAQPSK Unmodified 1054.5659 0.56587452 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B7Z3E7;A8KA50;C9JXV0 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 6 0 1 44.577 44.666 2 0.0058025 11563 20230619_1886_Aki_TMTPro18x_K_F6 99.815 56.788 28550 23990 30885 34443 30253 39069 41610 39127 50244 37978 36645 43756 46504 34902 37278 36695 46987 45857 26422 22044 31209 33973 31823 39128 41537 39945 50123 38639 38713 43821 46694 36423 38598 37363 44855 43462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17628000 4119 1984 3925 7676 6262 6262 1 9606 Homo sapiens 0.040774217520947786 DIPVTSANR Unmodified 971.50361 0.50360861 2488 B4DHJ9;Q15386 UBE3C Ubiquitin-protein ligase E3C yes no 0 0 0 4.5 0.5 1 1 37.438 37.482 2 0.0023847 8537 20230619_1883_Aki_TMTPro18x_K_F4 106.94 66.672 32958 23250 35531 32621 46234 46677 43901 46111 60872 37397 44911 40196 39947 34884 39640 33878 54608 40985 30468 21373 36021 32361 47100 46115 44909 46888 60329 38393 46577 40513 40945 36113 41100 34481 52009 38903 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23390000 4120 2488 3926 7677;7678 6263;6264 6263 2 9606 Homo sapiens 0.016716954037519827 DIPVVHQLLTR Unmodified 1289.7456 0.74557022 1670 P30419;A0A7I2V539;Q96HI4;P30419-2;A0A7I2V3X4;A4FU65 NMT1 Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase yes no 0 0 0 1.5 0.5 1 1 53.311 53.344 3 6.5955E-05 15748 20230619_1881_Aki_TMTPro18x_K_F2 126.34 100.17 70423 51232 55420 59078 44940 61826 53391 50259 66455 75282 68793 62042 88338 64368 67083 81720 63725 60697 64958 46995 57415 59058 47897 62034 53766 52826 67128 74355 71260 63690 88436 67268 68483 80634 60984 57884 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 536810000 4121 1670 3927 7679;7680 6265;6266 6266 2 9606 Homo sapiens 0.11228725759883673 DIQEDSGMEPR Oxidation (M) 1291.535 0.53504468 3318 O75844;B3KNM6 ZMPSTE24 CAAX prenyl protease 1 homolog yes no 0 1 0 1 0 1 34.585 34.585 2 0.0024178 7794 20230619_1880_Aki_TMTPro18x_K_F1 91.855 80.365 45594 32046 40016 42802 57025 56481 55548 54192 70883 59005 70733 67751 75574 57971 58469 66439 84666 77524 42080 29444 41384 42514 57831 56030 56544 55639 71298 59668 72745 68072 76147 60613 61239 67225 80705 73541 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45902000 4122 3318 3928 7681 6267;6268 6268 1949 2 9606 Homo sapiens -0.09906144415117524 DIQEDSGMEPR Unmodified 1275.5401 0.54013005 3318 O75844;B3KNM6 ZMPSTE24 CAAX prenyl protease 1 homolog yes no 0 0 0 1 0 1 40.023 40.023 2 4.7539E-09 10092 20230619_1880_Aki_TMTPro18x_K_F1 189.17 160 66197 57754 63772 62747 68778 83213 85933 82147 107300 91404 98491 99862 104880 86827 90003 117090 118730 107910 61218 52912 65079 63261 71591 82563 86273 84224 107690 92174 101740 100600 106150 91584 93513 116580 113250 102630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92028000 4123 3318 3928 7682 6269 6269 1 9606 Homo sapiens -0.08661840552485955 DIQEESTFSSR Unmodified 1297.5786 0.57862405 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 1.5 0.5 1 1 41.45 41.489 2 1.3122E-17 10486 20230619_1881_Aki_TMTPro18x_K_F2 261.52 227.59 588490 420300 452050 506030 487080 605160 493950 562940 803110 661640 727650 878550 799790 709050 549720 910110 939680 920840 542680 385740 471430 505280 504900 603300 507280 580500 797250 670310 753810 876120 802790 747300 586900 910820 895180 874570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 700960000 4124 1723 3929 7683;7684 6270;6271 6271 2 9606 Homo sapiens -0.05826211646331103 DIQENDEEAVQVK Unmodified 1515.7053 0.70528113 3207 O00231;O00231-2;B4DTS5;J3QRY4 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 1 0 1 46.096 46.096 3 7.8532E-11 12768 20230619_1880_Aki_TMTPro18x_K_F1 172.76 161.32 23834 26668 38039 29179 44261 33859 45586 35289 36256 30719 34098 25071 31467 23849 58402 18924 35963 27774 22198 24415 37490 29357 45322 33967 45581 35852 37365 31125 34979 25677 33435 24419 57450 19721 34570 26316 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33871000 4125 3207 3930 7685 6272 6272 1 9606 Homo sapiens -0.03194330211886154 DIQMPDGIR Unmodified 1043.507 0.50697943 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4 0 1 48.827 48.865 2 0.00064704 13461 20230619_1883_Aki_TMTPro18x_K_F4 128.38 96.028 173670 147600 176100 197410 179270 207860 212910 214200 234240 245270 246160 258340 257980 221010 231480 280270 266870 285730 160650 135520 178900 195370 186920 209490 213400 219220 237990 246560 252600 260400 261700 232340 238080 280850 255130 271260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103350000 4126 3881 3931 7686 6273 6273 1 9606 Homo sapiens -0.013033778139060814 DIQSCTVEVHFQK Unmodified 1589.7508 0.75079153 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64;C9JVD8;C9J578 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 5.5 0.5 1 1 48.146 48.223 3 5.8563E-11 13138 20230619_1886_Aki_TMTPro18x_K_F6 178.23 139.02 94872 77927 90791 93857 74340 96705 95752 89989 103020 111180 107100 103650 117380 101610 89421 124550 117580 121340 87696 71478 92358 93527 79215 97396 95552 92989 104760 111010 110100 105530 118180 106100 93171 124510 112250 115270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239020000 4127 4593 3932 7687;7688 6274 6274 1 9606 Homo sapiens -0.020493832304737225 DIRDPNFCER Unmodified 1320.5881 0.5880833 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;A0A7I2V3I5;A0A7I2V2T9;A0A7I2V3J7;A0A7I2V682;A0A7I2V407;A0A7I2V2J0;A0A7I2V5R0;E7EPA6;A0A7I2V2R2;A0A7I2V5T9;C9J296 LAMB1 Laminin subunit beta-1 yes no 0 0 1 3 0.816 1 1 1 38.512 38.565 3 5.2102E-07 9006 20230619_1882_Aki_TMTPro18x_K_F3 155.97 138.94 70927 54088 64762 66989 78377 85210 93001 83419 91033 87488 83866 90953 102080 74692 84529 118700 98994 88142 65509 49639 66537 66838 80698 84739 92813 85458 92597 88301 87234 91673 102710 79910 87249 116760 94502 84081 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136620000 4128 3015 3933 7689;7690;7691 6275 6275 1 9606 Homo sapiens -0.059387218418123666 DIRDYNDADMAR Unmodified 1453.6256 0.62559102 3899 Q14696;H0YLI4;Q14696-2 MESDC2 LDLR chaperone MESD yes no 0 0 1 2 0 1 39.631 39.701 3 7.5709E-08 9660 20230619_1881_Aki_TMTPro18x_K_F2 147.33 129.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4129 3899 3934 7692 6276 6276 1 9606 Homo sapiens -0.0830767536683652 DIREEAEK Unmodified 988.48254 0.48253882 1225 Q6IB71;A0A140VK43;P25788-2;P25788;G3V4X5;H0YJ03 PSMA3 Proteasome subunit alpha type;Proteasome subunit alpha type-3 yes no 0 0 1 2.5 0.5 1 1 36.202 36.258 3 0.0069129 8185 20230619_1881_Aki_TMTPro18x_K_F2 90.761 35.526 101850 46843 138640 143260 183210 194690 152580 168000 421290 110830 166520 196280 164100 139190 164710 73482 189080 161780 94200 43741 138460 137200 186380 192150 163650 171930 402660 118380 182820 193220 167720 142050 168280 80173 180480 152820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126730000 4130 1225 3935 7693;7694 6277 6277 1 9606 Homo sapiens -0.012163146957618665 DIRPECR Unmodified 944.4498 0.4497989 3413 P08651-5;Q6FI30;B7Z4T6;A0A286YEX4;P08651-4;P08651-3;P08651-6;P08651-2;P08651 NFIC Nuclear factor 1 C-type;Nuclear factor 1 yes no 0 0 1 3 0.816 1 1 1 28.57 28.655 3 0.023335 5081 20230619_1882_Aki_TMTPro18x_K_F3 81.296 46.001 68147 67069 65059 69287 86902 96416 91473 88408 124600 89036 94698 94686 92961 89486 77127 65602 112970 106420 63070 61395 66717 70173 88722 95276 92922 90866 123750 90218 98462 95616 94298 91242 80609 68642 107700 100670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37413000 4131 3413 3936 7695;7696;7697 6278 6278 1 9606 Homo sapiens -0.024648002995945717 DIRPGAAFEPTYIYR Unmodified 1767.8944 0.8944193 1642 A0A7G6J4N4;Q14694;Q14694-3;Q14694-2;J3KT19;B4DDR4 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 0 0 1 1 0 1 51.955 51.955 3 2.9458E-14 15166 20230619_1880_Aki_TMTPro18x_K_F1 187 160.64 168200 149040 157450 178740 134490 161790 158130 158130 167190 231400 209150 190220 219190 195600 185020 234620 214590 241450 155530 136670 160620 177850 142270 164820 158460 163780 171800 228590 212900 195190 221820 203680 190660 235370 205210 229160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162620000 4132 1642 3937 7698 6279 6279 1 9606 Homo sapiens 0.04118786872140845 DIRPVCR Unmodified 914.47562 0.47561972 3204 O00148;B4DX78;O00148-2;K7EQN7;A0A024R7H0;O00148-3 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A yes no 0 0 1 6.5 1.12 1 1 1 1 30.639 30.694 3 0.0061848 6053 20230619_1886_Aki_TMTPro18x_K_F6 102.77 71.401 431050 282660 406070 415930 539010 513500 471200 476820 607720 428020 513040 454930 505870 418570 443570 456200 620980 489240 397900 260070 416510 410240 547180 511050 483180 488280 607050 436420 530030 459710 513720 435070 461930 459700 591530 464810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 835850000 4133 3204 3938 7699;7700;7701;7702 6280;6281 6280 2 9606 Homo sapiens 0.01496093942682819 DISCLNRDPAR Unmodified 1315.6303 0.63028247 100 Q0VAB1;A0A024R0M6;Q3ZCQ8;Q3ZCQ8-2;M0R1Y4;M0R003;Q3ZCQ8-3;M0R2Q2 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes no 0 0 1 5.5 0.5 1 1 37.138 37.218 3 4.9747E-07 8425 20230619_1886_Aki_TMTPro18x_K_F6 137.55 92.471 95935 80156 90711 93348 115330 109620 109480 102670 120110 107370 130450 124400 122680 105540 123350 131110 145930 131680 88680 73494 92948 93422 117560 109520 111040 105520 122120 108800 132990 124940 125520 110820 126700 131360 139300 125120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159810000 4134 100 3939 7703;7704 6282;6283 6283 2 9606 Homo sapiens -0.01490746433410095 DISEASVFDAYVLPK Unmodified 1652.8298 0.82975336 643 A0A024RB14;P62854;Q75MH1 RPS26 40S ribosomal protein S26 yes no 0 0 0 5.25 0.829 1 1 2 63.352 63.39 3;4 1.4501E-10 19457 20230619_1885_Aki_TMTPro18x_K_F5 152 138.26 411010 341180 376630 410970 358170 422300 432350 439480 490460 475590 387450 359680 543510 407700 387930 555510 489940 550750 379820 312930 385430 409520 375820 426530 433430 448660 492610 475290 408910 372370 542140 427210 403780 555010 468200 522940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4782900000 4135 643 3940 7705;7706;7707;7708 6284;6285;6286 6285 3 9606 Homo sapiens 0.029451672754703395 DISEVIALGVPNPR Unmodified 1478.8093 0.80929269 3859 Q6I9S2;Q13573;G3V3A4;G3V4X8;B7Z9X2;B4DY36;A0A024R6E3;B4DEG7;Q9ULA6 SNW1 SNW domain-containing protein 1 yes no 0 0 0 7.5 0.5 1 1 62.137 62.17 3 0.028529 18798 20230619_1887_Aki_TMTPro18x_K_F7 50.532 35.839 120020 103710 120920 136830 123960 143740 138280 147390 167810 153770 147740 158830 149560 148850 162600 160820 156870 180570 111030 95195 122910 135530 128980 144870 139530 150470 168480 155240 152730 160630 153350 154450 164800 162540 150310 171210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86239000 4136 3859 3941 7709;7710 6287 6287 1 9606 Homo sapiens 0.08904041406321994 DISLSDYK Unmodified 939.45493 0.45492709 1476 A0A384NPQ2;Q06830;A0A0A0MSI0 PRDX1 Peroxiredoxin-1 yes no 0 0 0 5 0.816 1 1 1 52.159 52.217 3 4.7893E-06 14982 20230619_1883_Aki_TMTPro18x_K_F4 175.38 78.884 704140 561040 615950 708310 791890 851280 787080 728510 919560 851680 880990 806240 907650 753640 849800 1017100 963520 862830 650320 514910 636250 704870 808670 847210 797690 756120 927800 853120 906400 819400 922780 792960 872320 1008800 920090 821520 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2671600000 4137 1476 3942 7711;7712;7713 6288;6289;6290 6288 3 9606 Homo sapiens -0.017222179560008044 DISNCWAPK Unmodified 1089.4913 0.49132937 3916 Q15061 WDR43 WD repeat-containing protein 43 yes yes 0 0 0 7 0 1 49.795 49.879 3 0.0015427 13521 20230619_1887_Aki_TMTPro18x_K_F7 82.287 60.259 72582 69085 84198 79765 82065 95463 92567 86402 98918 98316 97167 78443 100510 70346 88072 92733 84467 77991 67272 63310 84518 79910 85689 95137 92927 89207 100370 98128 99791 80320 101760 74085 89601 91999 80807 74257 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49424000 4138 3916 3943 7714 6291 6291 1 9606 Homo sapiens -0.04983664330961801 DISPVLK Unmodified 770.4538 0.45380487 3401 P07741;H3BQZ9;P07741-2;H3BQB1;H3BQF1;H3BSW3 APRT Adenine phosphoribosyltransferase yes no 0 0 0 6.5 0.5 1 1 49.285 49.366 2 0.029363 13618 20230619_1886_Aki_TMTPro18x_K_F6 95.541 11.698 767930 594370 696240 746230 679220 850390 736690 658070 1015400 935280 1002800 1080500 1114300 960340 816330 1230900 1256700 1222900 709290 545530 713350 742300 709900 847430 747980 693400 1018000 935360 1034400 1086300 1120100 1008700 861910 1230800 1197900 1161800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1241400000 4139 3401 3944 7715;7716 6292 6292 1 9606 Homo sapiens 0.0593961246577237 DISPVLKDPASFR Unmodified 1443.7722 0.7721789 3401 P07741;H3BQZ9;P07741-2;H3BQB1;H3BQF1;H3BSW3 APRT Adenine phosphoribosyltransferase yes no 0 0 1 8 0 1 52.52 52.597 3 6.0769E-06 14655 20230619_1888_Aki_TMTPro18x_K_F8 128.15 101.64 604680 531650 705250 683180 683720 700040 723910 651080 453710 850130 871840 451440 409980 290740 1056400 270400 284470 187590 560160 487850 707520 677770 711450 705700 719830 673880 495330 835310 853010 471130 462160 304660 1015900 270130 278970 179410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 373190000 4140 3401 3945 7717 6293 6293 1 9606 Homo sapiens 0.06804369860560655 DISSALR Unmodified 760.40792 0.40791731 1206 A0A140VJT8;P13489;A0A024RC87;E9PIM9;E9PMJ3;E9PLZ3;E9PIK5;E9PMA9 RNH1 Ribonuclease inhibitor yes no 0 0 0 5.5 0.5 1 1 41.781 41.866 2 0.0001029 10284 20230619_1886_Aki_TMTPro18x_K_F6 138.48 44.316 131720 111450 116170 117450 161610 161180 166360 151970 211520 166500 182430 161850 178170 144600 170750 196930 207390 184870 121710 102090 120000 118760 164360 159540 168730 156250 211630 167470 188220 164090 181640 152520 175920 196300 197920 175800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 246720000 4141 1206 3946 7718;7719 6294;6295 6295 2 9606 Homo sapiens 0.01812967283535727 DISSIGLK Unmodified 831.47018 0.47018322 2126 A8K8U1;Q86VP6;Q86VP6-2 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 7.5 0.5 1 1 52.07 52.146 2 0.0007217 14452 20230619_1888_Aki_TMTPro18x_K_F8 157.58 89.498 587030 507040 560000 557110 619480 698410 598340 606940 724320 727100 773540 754190 789850 618150 668440 860470 871530 802470 542800 464590 571970 560540 638550 693570 608600 629460 732920 729260 791770 760100 799660 655080 694100 856960 831430 763060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 618710000 4142 2126 3947 7720;7721 6296;6297 6297 2 9606 Homo sapiens 0.047706936318604676 DISSSLNSLADSNAR Unmodified 1548.738 0.73797824 317 A0A024R534;O94776 MTA2 Metastasis-associated protein MTA2 yes no 0 0 0 5 0 1 51.984 52.058 3 3.3313E-09 14634 20230619_1885_Aki_TMTPro18x_K_F5 147.56 141.28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4143 317 3948 7722 6298 6298 1 9606 Homo sapiens -0.014441230889815415 DISSTLIALADK Unmodified 1245.6816 0.68163256 2900 E7ESY4;Q13330-3;Q13330;Q13330-2;H7C3F3 MTA1 Metastasis-associated protein MTA1 yes no 0 0 0 7.5 0.5 1 1 63.551 63.579 3 0.010272 19353 20230619_1888_Aki_TMTPro18x_K_F8 67.519 44.634 167610 134110 181620 166910 181420 203070 198180 166420 199850 228010 218410 199520 253990 203340 205050 271170 243700 261360 155070 123070 183250 166360 188850 201780 198900 174250 204460 226300 224620 204120 255700 213310 211880 270650 232920 248280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 400270000 4144 2900 3949 7723;7724 6299;6300 6300 2 9606 Homo sapiens 0.06861900812282329 DISTLNSGK Unmodified 933.47673 0.47672516 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 6.5 0.5 2 2 44.178 44.265 2;3 1.204E-05 11043 20230619_1887_Aki_TMTPro18x_K_F7 189.38 117.43 164520 95146 177800 206130 236520 285990 219310 242360 269090 184690 282700 329730 281320 256870 261050 150260 332610 342660 151950 88093 180610 199800 240790 281810 223710 249040 271460 194300 289660 325350 286350 261860 269110 163870 317620 323380 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 268360000 4145 3384 3950 7725;7726;7727;7728 6301;6302;6303 6303 3 9606 Homo sapiens 0.007325867925828788 DISTLNSGKK Unmodified 1061.5717 0.57168818 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 1 1.5 0.5 1 1 42.212 42.252 3 0.0006248 11125 20230619_1880_Aki_TMTPro18x_K_F1 99.973 64.678 42895 29375 47077 56033 71771 70612 60650 65515 62160 51656 61591 67536 54673 54412 64769 33390 71602 58595 39656 27118 47892 54524 72206 70148 61850 66899 63194 53436 62987 67322 56557 55441 65875 35419 68352 55435 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285610000 4146 3384 3951 7729;7730 6304 6304 1 9606 Homo sapiens 0.043365202637687617 DISTNKVEQIPYGER Unmodified 1747.8741 0.87407779 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1;F8VU51;H0YI23;B4DMQ9 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 1 5.5 0.5 1 1 47.135 47.214 3 0.0071263 12686 20230619_1886_Aki_TMTPro18x_K_F6 68.978 48.315 56353 51945 58931 60006 59810 63191 68431 67709 65587 69113 72437 60283 62257 48978 73152 58857 61866 50099 52169 47608 59671 60005 62231 63779 68428 68890 67260 69475 73502 61240 64332 51430 73489 58555 59221 47721 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76930000 4147 3610 3952 7731;7732 6305 6305 1 9606 Homo sapiens 0.030055714216587148 DISTNYYASQK Unmodified 1288.5935 0.59354583 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;B4DU71;B4DHT9 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 6.8 0.748 2 2 1 46.051 46.129 2;3 7.7121E-17 11782 20230619_1887_Aki_TMTPro18x_K_F7 261.58 203.99 329530 274360 320330 329590 400630 439180 426220 406280 493360 428410 522480 548690 470860 428440 454900 553730 598700 562090 304670 251630 327490 329780 410510 435040 430230 417920 499610 435540 532610 547620 481810 452310 471330 554600 571190 533920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2718700000 4148 3452 3953 7733;7734;7735;7736;7737 6306;6307;6308 6307 3 9606 Homo sapiens -0.0392071977832984 DISTTLNADEAVAR Unmodified 1474.7264 0.72635092 769;1249 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72;Q53ZP9;A0A140VKE7;B4DZR0;O95757;E9PDE8;B4DXT2;D6RJ96;B3KNM0 HSPH1;HSPA4L Heat shock protein 105 kDa;Heat shock 70 kDa protein 4L no no 0 0 0 2.5 0.5 2 2 49.014 49.085 2;3 1.0567E-69 13986 20230619_1881_Aki_TMTPro18x_K_F2 350.4 314.86 286810 216730 265300 290230 237730 292330 264270 279870 303250 357540 309300 288440 385990 268980 265750 398650 349660 321240 264910 199070 271030 287030 250160 295060 266280 288800 307420 354990 320130 295450 385460 285190 277700 393780 333550 306040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1117500000 4149 769;1249 3954 7738;7739;7740;7741 6309;6310;6311 6309 3 9606 Homo sapiens 0.007976798876825342 DITEEIMSGAR Unmodified 1220.5707 0.5707019 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;C9JF13;C9J6B6;C9JHW9;F8WCF2;O95065;E7EUU4;Q04637-8;E7EX73;E9PGM1;C9J2Z7;C9K073 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 2.5 0.5 1 1 54.056 54.097 2 3.8266E-05 16217 20230619_1881_Aki_TMTPro18x_K_F2 168.74 149.47 428290 355490 410950 415280 314770 440390 377680 410010 483000 505960 412440 452170 524570 449040 446200 560340 513120 503850 395930 325960 417540 414910 337210 442570 380660 423430 483730 504620 431640 461260 528220 469160 459420 557830 490240 479190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 641450000 4150 1676;2901 3955 7742;7743 6312;6313 6312 2 9606 Homo sapiens -0.030760621674289723 DITIHANPFAQ Unmodified 1225.6091 0.60913632 266 A0A024R3V4;H7BZ14;Q9H2H8;B8ZZ77;A0A0S2Z5A8;Q9H2H8-2 PPIL3 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase-like 3 yes no 0 0 0 6 0 1 54.45 54.527 2 0.0096715 15813 20230619_1886_Aki_TMTPro18x_K_F6 73.985 66.314 54366 52583 50456 56582 61157 74431 54500 53779 61015 63696 72184 83328 79744 65925 68378 89136 91061 89566 50298 48154 51781 57041 62572 73441 55558 56646 62268 64446 73936 83114 80617 69796 71097 89158 86897 85071 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142270000 4151 266 3956 7744 6314 6314 1 9606 Homo sapiens 0.0053561152938073064 DITLFHAMDTLHK Unmodified 1540.7708 0.77079869 2900;4026 E7ESY4;Q13330-3;Q13330;A0A024R6P5;Q13330-2;H0Y4T7;Q86TR6;Q59FW1 MTA1 Metastasis-associated protein MTA1 no no 0 0 0 1 0 1 55.719 55.719 4 9.0675E-06 16745 20230619_1880_Aki_TMTPro18x_K_F1 121.76 95.636 32595 29346 30770 31393 31861 38395 34241 38178 40625 39497 38072 38552 46486 35354 38979 45523 45379 51151 30145 26879 31433 31644 33110 38289 34597 39031 40941 39818 39550 39084 46799 37146 40159 45873 43396 48502 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71119000 4152 2900;4026 3957 7745 6315 6315 1 9606 Homo sapiens 0.02204412500145736 DITLFHAMDTLQR Unmodified 1559.7766 0.77661235 317 A0A024R534;O94776;O94776-2 MTA2 Metastasis-associated protein MTA2 yes no 0 0 0 7.5 0.5 1 1 57.726 57.778 3 1.2658999999999998E-21 16916 20230619_1887_Aki_TMTPro18x_K_F7 233.37 208.43 75976 65830 66432 73528 71375 92560 78538 84877 104100 72024 74648 69346 83307 64674 74203 81243 72825 71998 70206 60328 68415 73883 74116 91948 79553 86865 103340 73469 78312 70419 84281 67762 75577 80844 69686 68485 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133530000 4153 317 3958 7746;7747 6316 6316 1 9606 Homo sapiens 0.019115110118036682 DITLTNDKPATAIGVIGNFTDAER Unmodified 2531.2867 0.28674613 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 1 7 0 1 61.822 61.861 3 9.036900000000001E-20 18634 20230619_1887_Aki_TMTPro18x_K_F7 163.29 154.79 62968 56571 63287 66849 52246 56621 65980 65928 60021 80063 73749 65238 62980 53107 73026 55544 51881 44932 58263 51863 64117 66559 55470 58266 65588 67093 62112 79639 74522 66451 65050 55309 72817 55261 49796 42815 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 368820000 4154 2727 3959 7748 6317 6317 1 9606 Homo sapiens 0.08235422847974405 DITSLFR Unmodified 850.45487 0.45486751 1893 B2RAJ6;A0JP11;Q99570;D6RAC3;D6RBB7;D6RJ98 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes no 0 0 0 2 0 1 58.643 58.656 2 0.024683 18068 20230619_1881_Aki_TMTPro18x_K_F2 89.123 37.667 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4155 1893 3960 7749 6318 6318 1 9606 Homo sapiens 0.023658268346594014 DITYFIQQLLR Unmodified 1408.7715 0.77145062 622 P61158;A0A024RAI1;Q59FV6;B4DXW1;B4DTI0;Q59GD5;Q9P1U1;Q9P1U1-2;B7Z9W3;H7C4J1;C9IZN3;Q9C0K3;Q9P1U1-3;A0A0A0MTI9 ACTR3;ACTR3B;ACTR3C Actin-related protein 3;Actin-related protein 3B;Actin-related protein 3C yes no 0 0 0 5.5 0.5 1 1 67.495 67.538 3 4.5E-05 21359 20230619_1886_Aki_TMTPro18x_K_F6 132.78 116.24 9065.9 4464.5 4511.1 4270.7 5795 4773.8 6588.6 4607.1 5664 4288.4 3866.7 4060.1 3661.7 3518.2 4279 7896.2 4984.1 3279 8327.3 4097 4977.2 4340.5 5934.9 4792.9 6561.2 4715.4 5748.3 4347 4047.5 4123.2 3779.1 3868.3 4399.3 7595.2 4750.2 3169.6 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5212400 4156 622 3961 7750;7751 6319;6320 6320 2 9606 Homo sapiens 0.08341575211534291 DIVALMTR Unmodified 917.50044 0.50043749 1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 0 0 0 1 0 1 57.246 57.246 2 0.049322 17362 20230619_1880_Aki_TMTPro18x_K_F1 70.919 49.372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4157 1843 3962 7752 6321 6321 1 9606 Homo sapiens 0.03838729025403609 DIVEAHYR Unmodified 1001.493 0.49304393 1369 A8YXX4;A0A2R8YDT1;P15104;A1L199 PIG59;GLUL Glutamine synthetase yes no 0 0 0 3 0 1 35.917 35.975 3 0.00047891 7959 20230619_1882_Aki_TMTPro18x_K_F3 138.54 86.69 39853 27484 43636 43353 52050 52910 60819 58968 71029 80491 104760 120750 107180 93951 78684 60049 116140 123210 36843 25304 44146 42597 53590 52907 61134 60400 73123 81381 106070 119680 107980 96067 82467 64495 110810 116330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97481000 4158 1369 3963 7753 6322 6322 1 9606 Homo sapiens -0.007642872506721687 DIVEELSALK Unmodified 1115.6074 0.60740498 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 4 0 1 63.337 63.343 3 0.08257 19734 20230619_1883_Aki_TMTPro18x_K_F4 50.353 32.622 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4159 3588 3964 7754 6323 6323 1 9606 Homo sapiens 0.05422557720748955 DIVENICGR Unmodified 1074.5128 0.51279309 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 3.5 0.5 1 1 46.171 46.231 2 0.0010729 12254 20230619_1883_Aki_TMTPro18x_K_F4 119.21 64.099 242970 184320 208020 235130 217200 264610 272640 270840 354850 280490 297940 284280 313800 254750 255280 313550 339570 326210 224300 169220 214590 233650 226770 265390 274120 276490 354310 283230 308880 287550 317020 266950 265580 314670 323990 309750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 472820000 4160 3578 3965 7755;7756 6324 6324 1 9606 Homo sapiens -0.02148279302195988 DIVENYFMR Unmodified 1185.5488 0.54884425 2263 B2R8R5;Q13263;M0R2I3 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 5.5 0.5 1 1 58.959 59.019 2 9.2609E-05 17710 20230619_1886_Aki_TMTPro18x_K_F6 169.12 136.31 228430 200570 210200 235070 213840 283780 246710 275700 408000 301540 275630 272660 281300 247200 279420 300080 300680 310740 211180 183880 215320 235210 223450 282970 251750 282740 400950 302750 289220 277240 286970 258660 285450 301240 287550 294990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 353400000 4161 2263 3966 7757;7758 6325;6326 6326 2 9606 Homo sapiens -0.03650822125382547 DIVHSGLAYTMER Oxidation (M) 1506.7137 0.71367774 2542 P00367;E9KL48;B4DMF5;Q53GW3;B4E0N9;P00367-3;A0A804HJD7;A0A804HKE0;P00367-2;Q14400 GLUD1 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase yes no 0 1 0 5.5 0.5 1 1 44.676 44.759 3 0.010913 11567 20230619_1885_Aki_TMTPro18x_K_F5 63.16 51.72 48520 45532 47534 46470 51908 52592 56317 51372 57915 61440 61399 50002 54984 47394 60749 56953 55987 56461 44899 41682 48426 46967 53643 52728 56574 52836 59071 61203 62493 51222 56588 49492 61390 57067 53618 53630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96452000 4162 2542 3967 7759;7760 6327 6327 1544 1 9606 Homo sapiens -0.01941054776261808 DIVHSGLAYTMER Unmodified 1490.7188 0.71876312 2542 P00367;E9KL48;B4DMF5;Q53GW3;B4E0N9;P00367-3;A0A804HJD7;A0A804HKE0;P00367-2;Q14400 GLUD1 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase yes no 0 0 0 6 0 1 48.788 48.866 3 6.0377E-12 13418 20230619_1886_Aki_TMTPro18x_K_F6 192.65 151.92 90567 67307 97408 88061 96600 116050 109480 106760 139120 102430 103940 113950 106420 110430 101780 113220 122990 113270 83749 61813 98333 87608 100840 114970 110530 109580 138530 104200 108480 115020 108500 114070 104810 113720 117410 107620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313150000 4163 2542 3967 7761 6328 6328 1 9606 Homo sapiens -0.006967509136302397 DIVINANPASPPLSLLVLHR Unmodified 2138.2212 0.22117317 71 A0A024QZY1;Q13155;B2R7M3;Q13155-2;A8MU58 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes no 0 0 0 4 0 1 62.861 62.867 3 0.035588 19573 20230619_1883_Aki_TMTPro18x_K_F4 44.441 31.95 50488 34930 47106 51252 40295 54334 47360 45057 62093 61636 56404 72703 75550 63763 60144 79344 74866 92484 46614 32131 48064 50431 42696 54458 47804 47139 62235 61759 59077 72957 75783 66911 62352 80151 71611 87638 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21194000 4164 71 3968 7762 6329 6329 1 9606 Homo sapiens 0.19759142974226052 DIVPGDIVEIAVGDK Unmodified 1538.8192 0.81918867 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 0 0 4.5 0.5 1 1 63.892 63.918 3 1.962E-05 19709 20230619_1885_Aki_TMTPro18x_K_F5 105.46 81.474 30392 22726 28182 35887 23643 30897 23817 29071 37499 32504 36197 46639 53427 51928 28847 72096 67165 80424 28070 20916 28788 35066 24996 31553 24454 29930 37376 33124 37988 46935 52909 54433 32124 72440 63984 76250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147030000 4165 1076 3969 7763;7764 6330 6330 1 9606 Homo sapiens 0.07133184621034161 DIVPVDASYEVK Unmodified 1333.6765 0.67654718 3250 O43252;Q05BW9 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 4 0 1 55.602 55.612 2 0.0036372 16454 20230619_1883_Aki_TMTPro18x_K_F4 106.62 83.19 76898 63662 72669 71846 82630 94963 77138 85623 81299 105690 101070 96855 112610 83213 95271 122120 104020 118330 71078 58356 74314 72209 84931 94064 78284 88593 83527 105420 103240 98310 113650 88412 97823 121790 99545 112380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98275000 4166 3250 3970 7765 6331 6331 1 9606 Homo sapiens 0.023055969496454054 DIVQFVPFR Unmodified 1119.6077 0.60767976 561;4655;2892;2682 O75131;A0A024R994;Q4G168;A0A0J9YWA1;B3KWK1;B2RD40;A8K8A4;Q8IYJ1;Q9HCH3;O95741;Q96FN4-2;Q96FN4;Q9HCH3-2;O95741-2;E7ENV7;Q86YQ8-2;Q86YQ8;B7Z370;Q96A23;Q96A23-2;Q9UBL6;Q9UBL6-2 CPNE3;CPNE4;CPNE6;CPNE9;CPNE5;CPNE2;CPNE8;CPNE7 Copine-3;Copine-9;Copine-5;Copine-6;Copine-2;Copine-8;Copine-4;Copine-7 no no 0 0 0 3 0 1 62.066 62.096 2 0.045413 19272 20230619_1882_Aki_TMTPro18x_K_F3 73.665 49.033 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4167 561;2892;2682;4655 3971 7766 6332 6332 1 9606 Homo sapiens 0.052660222312852056 DIVQFVPYR Unmodified 1135.6026 0.60259438 2180 Q99829;B0QZ18;F2Z2V0;Q59EI4;H0Y524 CPNE1 Copine-1 yes no 0 0 0 1 0 1 57.351 57.351 2 0.0021544 17409 20230619_1880_Aki_TMTPro18x_K_F1 111.04 81.464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4168 2180 3972 7767 6333 6333 1 9606 Homo sapiens 0.04021718368676375 DIVVLGVEK Unmodified 970.5699 0.56989727 1051 Q05DH1;A0A0K0K1K4;O14818;H0UI83;O14818-4 PSMA7;hCG_41772 Proteasome subunit alpha type;Proteasome subunit alpha type-7 yes no 0 0 0 5 0 1 57.166 57.224 2 0.0013836 16750 20230619_1885_Aki_TMTPro18x_K_F5 116.3 45.082 47393 39419 39572 45337 32521 56033 46806 47663 119910 50712 47164 47030 55466 44648 50317 55944 49471 54942 43767 36139 40807 45435 35059 55608 48537 49343 114880 51163 52143 47842 56119 46749 51242 55965 47379 52175 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9624600 4169 1051 3973 7768 6334 6334 1 9606 Homo sapiens 0.08343511245811897 DIVVQETMEDIDK Oxidation (M) 1549.7182 0.718154 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-2;O43852-4;A0A024R755;B3KNG6;O43852-10;O43852-6;O43852-15;H0Y875 CALU Calumenin yes no 0 1 0 1.5 0.5 1 1 53.071 53.088 3 5.3951E-07 15548 20230619_1880_Aki_TMTPro18x_K_F1 143.25 128.46 98899 84691 92589 107140 106640 113200 116770 119410 137310 140450 153240 152140 158110 138980 143150 170590 149270 168650 91428 77708 94884 106430 109920 114160 117790 122120 139380 141160 156670 153530 160520 145440 146320 170740 142900 160130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 243280000 4170 2386 3974 7769;7770 6335;6336 6335 1470 2 9606 Homo sapiens -0.034716351439783466 DIVVQETMEDIDK Unmodified 1533.7232 0.72323938 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-2;O43852-4;A0A024R755;B3KNG6;O43852-10;O43852-6;O43852-15;H0Y875 CALU Calumenin yes no 0 0 0 2 0.816 1 1 1 60.536 60.549 3 5.6371E-11 18807 20230619_1881_Aki_TMTPro18x_K_F2 178.84 153.66 185940 140940 160710 169280 145500 193230 184090 182840 212130 223820 205440 222410 238540 201160 202610 267140 242930 266500 171670 129310 165220 168970 153720 193270 184260 188580 214390 223950 212650 225130 240730 211710 209250 267140 232210 253040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 330510000 4171 2386 3974 7771;7772;7773 6337;6338;6339 6338 3 9606 Homo sapiens -0.022273312813695156 DIWQGGVCPQK Unmodified 1286.6078 0.60775611 3669 P56730;Q96I80 PRSS12 Neurotrypsin yes no 0 0 0 8 0 1 51.666 51.743 3 0.0016516 14276 20230619_1888_Aki_TMTPro18x_K_F8 84.507 55.55 69889 58995 61485 68543 66194 79421 70871 77592 94852 69342 66284 69907 77144 58643 60415 82333 78543 67309 64573 54089 63278 68588 68622 79431 71922 79149 94080 70583 69831 70586 77581 62123 62845 81453 74896 64131 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42637000 4172 3669 3975 7774 6340 6340 1 9606 Homo sapiens -0.024083458310542483 DIYQDLNR Unmodified 1035.4985 0.49852324 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;B4DN49;V9H023;V9H0D5;B4DSB9;V9H0B2;V9H015;V9H062;Q0ZAJ2;A5JTV3 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 3 0 1 45.745 45.82 2 0.0015081 12219 20230619_1882_Aki_TMTPro18x_K_F3 141.52 80.73 241470 186300 216870 232030 219180 256330 237480 221740 292280 260780 257230 258320 263430 230900 240840 240150 275580 273120 223010 170980 222490 230860 228230 256550 240050 230040 293220 261510 265830 261320 267670 239620 247200 243060 263320 259070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210840000 4173 3585 3976 7775 6341 6341 1 9606 Homo sapiens -0.017806084588528392 DKADFCIIHYAGK Unmodified 1536.7395 0.73949856 148;3549 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 1 4.5 3.5 1 1 50.552 50.59 4 5.5591E-05 14649 20230619_1880_Aki_TMTPro18x_K_F1 117.79 89.819 133350 104260 118300 129030 139100 135650 154970 144360 159380 151150 143610 127180 145190 102150 146050 124460 122550 108970 123150 95678 121800 128370 143120 136920 155420 147070 161510 151640 148090 129350 147990 107480 147080 123940 117390 103710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 488300000 4174 148;3549 3977 7776;7777 6342;6343;6344 6342 3 9606 Homo sapiens -0.0074016053395098425 DKAPGQLECETAIAALNSCLR Unmodified 2316.1202 0.12021485 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 1 7.5 0.5 1 1 58.291 58.34 3 3.0905000000000003E-30 17155 20230619_1888_Aki_TMTPro18x_K_F8 211.87 202.71 139660 123340 143400 146610 120970 130340 155170 144060 121530 156660 149070 106670 126500 86093 153840 90328 87015 58462 129230 113090 145040 146000 128190 133390 153500 146600 126940 156000 150470 109870 130850 89806 151910 89170 83704 55970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 196080000 4175 1292 3978 7778;7779 6345;6346 6346 2 9606 Homo sapiens 0.014799551468968275 DKDDDEVFEK Unmodified 1238.5303 0.53027687 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 1 2.67 1.25 1 1 1 45.574 45.614 3 0.00054507 12559 20230619_1880_Aki_TMTPro18x_K_F1 107.45 77.009 369700 269820 311870 392030 347040 431180 376460 383950 537150 481870 498310 493460 539910 439130 369010 628100 592540 547160 341180 248110 322690 386100 359310 431710 382770 398130 536480 482320 514570 498890 541730 464710 392000 622800 564460 520720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 287950000 4176 1676;2901 3979 7780;7781;7782 6347;6348 6347 2 9606 Homo sapiens -0.07944705286240605 DKDDDGGEDDDANCNLICGDEYGPETR Unmodified 3044.152 0.15198108 3811 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 1 1 0 1 48.486 48.486 4 2.7771E-28 13847 20230619_1880_Aki_TMTPro18x_K_F1 171.29 169.18 9653.4 8678 9375.1 9911.1 8771.1 12663 11761 11215 12273 13469 11526 15985 16006 12072 13357 14570 14373 14686 8929.6 7953.2 9546.6 9945 9260.8 12557 11699 11618 12458 13564 12089 15962 16058 12719 13691 14606 13744 13947 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 512330000 4177 3811 3980 7783 6349 6349 1 9606 Homo sapiens -0.2883288299967717 DKDPILR Unmodified 855.48142 0.48141661 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 1 5 0 1 39.082 39.173 3 0.02248 9166 20230619_1885_Aki_TMTPro18x_K_F5 87.754 61.691 323740 221770 266160 312360 335890 368910 343010 334450 454780 404350 437330 420220 410150 338460 334950 439750 477670 396290 298610 203910 276500 308580 343890 367890 348780 345910 456120 405520 448060 423190 415980 357150 350350 437560 455090 377160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203760000 4178 832 3981 7784 6350 6350 1 9606 Homo sapiens 0.04789515725997262 DKDTSSDPLLELR Unmodified 1487.7468 0.74675201 2945 E9PS41;Q6RFH5;Q6RFH5-2;B4E018 WDR74 WD repeat-containing protein 74 yes no 0 0 1 3.5 0.5 1 1 50.526 50.579 3 1.8387E-05 14382 20230619_1882_Aki_TMTPro18x_K_F3 119.77 101.04 178690 150220 174460 175830 181190 201700 207210 196640 190230 170800 170040 129310 163140 106200 167600 126410 117390 79757 165220 137740 177700 175850 188300 201890 206880 200540 193920 172730 174900 132470 166630 111490 167340 124280 112550 76386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119770000 4179 2945 3982 7785;7786 6351 6351 1 9606 Homo sapiens 0.022388505474509657 DKEDQWIR Unmodified 1088.5251 0.52507234 4448 Q9BV57;Q9BV57-2;A0A0G2JQN5 ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase yes no 0 0 1 3.5 0.5 1 1 42.267 42.32 3 0.055459 10521 20230619_1883_Aki_TMTPro18x_K_F4 53.683 36.247 266260 219040 257550 253280 257050 303800 290690 289840 380550 379260 403810 406870 431940 367970 382130 426740 456240 428890 246140 200840 262360 253720 268260 303050 293960 299400 383560 379410 414410 410480 437640 383950 393770 427910 435620 407440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 336440000 4180 4448 3983 7787;7788 6352 6352 1 9606 Homo sapiens -0.015649195675450756 DKFNECGHVLYADIK Unmodified 1807.8563 0.85631924 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 1 7 0.816 1 1 1 49.791 49.869 4 3.7343E-07 13504 20230619_1887_Aki_TMTPro18x_K_F7 122.1 89.106 560600 545070 641440 662540 762550 707840 772230 717840 485240 664530 678360 280570 282880 190470 793340 142170 150190 112240 519600 499710 646730 660160 780580 712960 769440 731170 518810 662050 667950 299680 324210 197480 758680 144180 149660 107060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 948430000 4181 3631 3984 7789;7790;7791 6353;6354 6353 2 9606 Homo sapiens -0.01529467104842297 DKFPGEFMK Unmodified 1097.5216 0.52156686 4746 Q9Y5B9;Q0VGA3 SUPT16H FACT complex subunit SPT16 yes no 0 0 1 8 0 1 51.517 51.594 3 0.0049131 14198 20230619_1888_Aki_TMTPro18x_K_F8 80.037 65.068 229930 185950 209270 226650 234850 262360 236770 246820 317740 282430 268900 231400 268860 213630 275720 242210 237250 206750 212440 170590 214790 226020 242190 262240 241120 254080 317160 282080 277960 236650 274570 222540 277930 241120 227160 196860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 70202000 4182 4746 3985 7792 6355;6356 6356 2 9606 Homo sapiens -0.023293056657394118 DKFSFDLGK Unmodified 1055.5288 0.52876073 3789 Q02790;B2R9U2;F5H1U3 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 1 1 0 1 54.565 54.565 3 0.032504 16237 20230619_1880_Aki_TMTPro18x_K_F1 60.102 39.439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4183 3789 3986 7793 6357 6357 1 9606 Homo sapiens 0.003217502063534994 DKGETIQGLR Unmodified 1115.5935 0.59348625 3882 Q14232;F5H0D0;Q14232-2;H0YGG4 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes no 0 0 1 6.5 0.5 1 1 39.563 39.628 3 0.0081057 9349 20230619_1886_Aki_TMTPro18x_K_F6 79.82 56.352 73780 51704 73986 77166 83717 92084 89137 93308 96068 81971 89263 80168 84787 74572 79240 74914 93827 71205 68163 47566 75312 76012 86323 91972 89785 94906 97161 83413 91650 81303 86443 77112 81444 75104 89476 67753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42530000 4184 3882 3987 7794;7795 6358;6359 6358 2 9606 Homo sapiens 0.040313250123290345 DKGEYTLVVK Unmodified 1150.6234 0.6233894 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 FLNA;FLJ00119 Filamin-A yes no 0 0 1 7.5 0.5 1 1 48.152 48.225 3 0.00043427 12758 20230619_1887_Aki_TMTPro18x_K_F7 111.91 72.889 477290 364850 436280 439420 651750 660150 638370 577600 689590 621400 680400 710960 706040 555890 668670 639710 615480 611180 440840 334750 449890 440540 659140 649040 645650 596900 699190 628510 699940 712240 717550 583030 677500 640120 589370 580820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 997030000 4185 3484 3988 7796;7797 6360;6361 6360 2 9606 Homo sapiens 0.05410263957674033 DKLDETGNSLK Unmodified 1218.6092 0.6091959 3433 P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2A DNA topoisomerase 2-alpha yes no 0 0 1 4.5 0.5 1 1 44.105 44.166 3 1.4789E-05 11277 20230619_1885_Aki_TMTPro18x_K_F5 143.25 87.823 545750 448180 492130 513580 499900 639620 473870 466300 878100 624160 675410 588870 657810 529630 544250 585110 622910 511330 504240 410900 504650 514900 519660 633170 491670 492580 862730 622190 700790 597500 666430 551280 559950 582980 594460 486850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 282300000 4186 3433 3989 7798;7799 6362;6363 6363 2 9606 Homo sapiens 0.008635667387125068 DKLDILGAAETGSGK Unmodified 1473.7675 0.76748745 3008 G3V529;Q9GZR7;B4DM03;B4DKV2;Q9GZR7-2;Q59FS7 DDX24 ATP-dependent RNA helicase DDX24 yes no 0 0 1 6.5 0.5 1 1 54.671 54.742 3 0.00085571 15710 20230619_1887_Aki_TMTPro18x_K_F7 82.707 62.28 36551 32967 38600 47279 40723 40619 37821 42230 47844 44675 47150 46417 47080 35610 45118 43400 43526 47475 33835 30286 39113 46460 42030 41619 38638 43105 48148 45066 48400 46671 47922 37528 45818 43723 41688 45034 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 764860000 4187 3008 3990 7800;7801 6364 6364 1 9606 Homo sapiens 0.049554409271195254 DKLESEMEDAYHEHQANLLR Oxidation (M) 2443.1074 0.10740156 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 1 1 2 0.816 1 1 1 42.544 42.592 5 2.3647E-22 11030 20230619_1881_Aki_TMTPro18x_K_F2 177.4 165.76 161020 127740 151860 174830 170970 170790 185740 177820 170260 163360 175340 153770 177780 138130 177930 177120 180810 181590 148790 117340 155440 172600 176270 173190 185950 180840 174540 165560 179680 156150 181280 145150 181090 177610 172980 172430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 393660000 4188 1450 3991 7802;7803;7804 6365;6366 6365 942 2 9606 Homo sapiens -0.05642784711562854 DKLESEMEDAYHEHQANLLR Unmodified 2427.1125 0.11248694 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 1 3.71 1.03 1 2 2 2 51.628 51.683 4;5 1.7028E-36 14727 20230619_1883_Aki_TMTPro18x_K_F4 230.99 207.43 518990 471930 494250 552320 465360 542950 537110 566250 520080 580550 558740 527130 652330 498710 574920 687030 652310 633330 480040 432600 504080 551160 487720 550300 537150 577210 532810 584120 575400 537010 658800 525590 590850 684010 623250 602180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6188599999.999999 4189 1450 3991 7805;7806;7807;7808;7809;7810;7811 6367;6368;6369 6369 3 9606 Homo sapiens -0.0439848084897676 DKLPNYEEK Unmodified 1134.5557 0.55570376 4448 Q9BV57;Q9BV57-2 ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase yes no 0 0 1 4.5 0.5 1 1 43.585 43.647 3 0.004765 11038 20230619_1885_Aki_TMTPro18x_K_F5 80.737 52.16 296750 247330 282600 270440 290700 336760 310350 308900 450920 419740 439800 379500 460150 364700 374590 489090 491080 416580 274320 226650 288320 272220 302260 334920 316120 320340 450910 417240 452080 386930 464860 383320 389450 485110 468220 396710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 348140000 4190 4448 3992 7812;7813 6370;6371 6371 2 9606 Homo sapiens -0.00619185973164349 DKLTELQLR Unmodified 1114.6346 0.63462279 4178 Q7Z7H5-3;Q7Z7H5-2;Q7Z7H5 TMED4 Transmembrane emp24 domain-containing protein 4 yes no 0 0 1 7.5 0.5 1 1 48.252 48.328 3 0.0023956 12805 20230619_1888_Aki_TMTPro18x_K_F8 91.937 38.421 221940 195620 240320 261070 261510 265360 287600 266740 276750 255230 288110 193030 144780 118270 323770 99219 111590 63843 205460 179570 243040 258290 270310 268070 288130 272160 282780 256600 288470 196260 160490 123470 313130 98842 108480 61188 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334780000 4191 4178 3993 7814;7815 6372 6372 1 9606 Homo sapiens 0.08189086051788763 DKNEFHK Unmodified 916.44028 0.44028008 4009 Q9GZL7;Q53T99 WDR12 Ribosome biogenesis protein WDR12 yes no 0 0 1 6 0 1 36.144 36.204 4 0.048767 8037 20230619_1886_Aki_TMTPro18x_K_F6 74.684 40.152 65178 22623 111590 121920 222190 168380 130370 192750 103920 62821 149060 171110 70027 98105 157390 29224 143350 102810 60407 21564 111110 115370 218750 167220 136170 191580 108950 73617 147660 166190 78353 99788 156990 35052 137010 97016 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39288000 4192 4009 3994 7816 6373 6373 1 9606 Homo sapiens -0.021282453134745083 DKNEQAFEEVFQNANFR Unmodified 2084.9552 0.95518166 3514 P27694;I3L4R8 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes no 0 0 1 5.5 0.5 1 1 59.13 59.19 3 1.7602E-23 17795 20230619_1886_Aki_TMTPro18x_K_F6 203.89 189.32 171590 150410 176930 176670 189790 211670 183930 191730 195810 199220 226050 199800 226740 193910 233790 200350 190060 198770 158780 137890 179470 176750 195960 210940 186270 197410 200050 200970 230410 202700 231630 200560 235020 201290 182330 188780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 348080000 4193 3514 3995 7817;7818 6374 6374 1 9606 Homo sapiens -0.04389772606236875 DKNESLTMR Unmodified 1092.5234 0.52335778 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;Q14980-5;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 5 0 1 36.858 36.951 3 0.061624 8291 20230619_1885_Aki_TMTPro18x_K_F5 48.981 32.757 37424 26505 37603 33275 47166 40431 43228 42704 44875 41280 50431 36552 37041 32520 49861 23066 31894 20632 34578 24336 38287 33160 48029 40422 43875 43418 45821 41651 50825 37195 38812 33174 49332 23300 30611 19663 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48125000 4194 349;3906 3996 7819 6375 6375 1 9606 Homo sapiens -0.019202966477905647 DKPAQIR Unmodified 826.4661 0.4661009 3622 P50991;A8K3C3;P50991-2 CCT4 T-complex protein 1 subunit delta yes no 0 0 1 6.5 0.5 1 1 33.05 33.114 3 0.041068 6548 20230619_1887_Aki_TMTPro18x_K_F7 69.198 30.05 140260 63869 204310 221150 329440 306370 226230 305760 208860 143530 264700 293850 175840 203800 286780 58306 254060 213650 129830 59837 204120 211180 328810 303060 233850 307850 215650 158240 265480 288140 187830 205360 286550 70440 243120 201430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181400000 4195 3622 3997 7820;7821 6376 6376 1 9606 Homo sapiens 0.04592648928792187 DKPHNIFK Unmodified 997.53451 0.53451481 3503 Q6FI51;Q6FHS4;P25685;A0A7I2V3K7;P25685-2;M0QXK0;M0R080 DNAJB1 DnaJ homolog subfamily B member 1 yes no 0 0 1 1.5 0.5 1 1 40.255 40.291 4 0.0068228 9915 20230619_1881_Aki_TMTPro18x_K_F2 100.25 52.958 289200 220670 230700 298430 332550 391680 315930 318240 388820 260550 312170 251790 250780 212290 317780 282780 326180 255740 266850 202710 241210 295980 337370 387150 321610 328620 388430 266450 320910 255040 261140 223990 322210 281660 311520 243450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 266690000 4196 3503 3998 7822;7823 6377 6377 1 9606 Homo sapiens 0.035648935086555866 DKPNPQLIYDDEIPSLK Unmodified 1984.0153 0.015322298 2170 A8QI98;Q9Y2L1;Q49AG4;G3V1J5;Q9Y2L1-2;A0A024R643;B3KM83 DIS3;KIAA1008 Exosome complex exonuclease RRP44 yes no 0 0 1 6 0 1 58.664 58.729 3 0.00048943 17603 20230619_1886_Aki_TMTPro18x_K_F6 74.732 60.571 23147 16489 19772 25044 22467 27008 26519 26143 28636 27367 28714 27339 31130 25917 27429 31993 27938 36352 21361 15172 20444 24597 23257 27124 26564 26802 29055 27596 29553 27723 31513 27115 28013 32279 26784 34450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15756000 4197 2170 3999 7824 6378 6378 1 9606 Homo sapiens 0.06267525004295749 DKPVTGEQIEVFANK Unmodified 1673.8625 0.86245047 4349 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 1 6.5 0.5 1 1 52.299 52.374 3 1.4629E-05 14917 20230619_1886_Aki_TMTPro18x_K_F6 112.67 87.874 118060 99767 115770 123830 101780 124830 129790 128580 135670 139870 143370 137740 149710 126140 147160 151800 146520 161760 109170 91528 117650 123110 107660 126210 129460 131410 138210 140670 147010 139580 152460 131890 149690 152680 140300 153480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123160000 4198 4349 4000 7825;7826 6379;6380 6379 2 9606 Homo sapiens 0.05247374398345528 DKQDADRPLSK Unmodified 1271.647 0.64697839 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B4DL23 CEP170 Centrosomal protein of 170 kDa yes no 0 0 2 6 0 1 36.067 36.128 4 0.0024246 8020 20230619_1886_Aki_TMTPro18x_K_F6 87.18 60.638 101550 45973 129230 129690 176110 166680 132580 161460 151050 111980 193770 183000 131650 128160 173900 71282 165710 143780 93848 42852 129630 124410 177770 165500 136920 163920 154270 117980 194060 180630 138390 130970 175050 76973 158480 135880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100780000 4199 1960 4001 7827 6381 6381 1 9606 Homo sapiens 0.022020777241777978 DKQPYEQK Unmodified 1034.5033 0.50327426 4068;3509 Q5U071;P26583 HMGB2 High mobility group protein B2 no no 0 0 1 5 0.816 1 1 1 36.575 36.644 3 0.0023303 8201 20230619_1886_Aki_TMTPro18x_K_F6 104.22 43.785 134830 61407 228400 209800 309060 259570 233230 326930 176850 126060 307030 336780 141870 204030 340880 52691 271020 217150 125040 57509 225220 200170 311520 260050 238280 323740 188020 144290 302220 327560 159900 206500 337640 65603 259610 204700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 625220000 4200 4068;3509 4002 7828;7829;7830 6382;6383 6383 2 9606 Homo sapiens -0.012597243161053484 DKQTESLVEK Unmodified 1175.6034 0.60338224 2356 B4E0B7;B3KMS0;Q15021;B3KY03 NCAPD2 Condensin complex subunit 1 yes no 0 0 1 4 0 1 42.059 42.102 3 0.0066966 10451 20230619_1883_Aki_TMTPro18x_K_F4 81.431 43.876 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4201 2356 4003 7831 6384 6384 1 9606 Homo sapiens 0.022604682270639387 DKRPEGYNLK Unmodified 1218.6357 0.63568542 1204 A0A140VJT0;P63151;P63151-2;Q56VW8;A0A590UJY3;Q00005-7;Q59GC6;Q00005-4;Q00005-5;Q00005-3;Q00005;Q9Y2T4-2;Q9Y2T4;Q00005-2;Q9Y2T4-4;Q00005-6;Q9Y2T4-3 PPP2R2A;PPP2R2B;PPP2R2C Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform yes no 0 0 2 4.5 3.5 1 1 38.295 38.288 4 0.00056561 8774 20230619_1888_Aki_TMTPro18x_K_F8 111.86 82.527 353600 300990 354370 374420 433660 437710 419760 397450 404630 484310 556570 442650 414940 347120 541140 349340 384600 237200 327060 276140 361190 372900 443340 437030 423690 411130 419310 483330 557170 448060 433600 361190 538300 345550 368470 227020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 350440000 4202 1204 4004 7832;7833 6385;6386 6386 2 9606 Homo sapiens 0.03511300420700536 DKVDVASVIVTK Unmodified 1272.7289 0.7289171 1672 A0A7P0PJI2;A0A7I2V5K0;P61011;G3V4F7;G3V480;B4DDS7;P61011-2;A0A7I2V584 SRP54 Signal recognition particle 54 kDa protein yes no 0 0 1 1 0 1 53.297 53.297 3 4.0779E-06 15729 20230619_1880_Aki_TMTPro18x_K_F1 143.05 120.86 148110 121300 138060 152820 149170 163510 171640 159760 173580 193030 181040 162630 184250 138490 167280 165590 158890 139390 136880 111320 141350 151870 154650 164450 171800 164370 177160 192330 185420 165650 186980 145160 169920 164540 151970 132740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83467000 4203 1672 4005 7834 6387 6387 1 9606 Homo sapiens 0.10346180083251966 DKVVEDDEDDFPTTR Unmodified 1779.7799 0.77990263 624 A0A2R8YFI2;A0A2R8YEA4;A0A2R8Y5H3;A0A2R8Y7Q9;A0A2R8YEK8;A0A2R8YE18;A0A2R8Y5S9;A0A024RAJ5;A0A2R8Y7C5;Q9Y5P4-2;Q9Y5P4;Q9Y5P4-3;A0A2U3TZL3;A0A2R8YE59 COL4A3BP Collagen type IV alpha-3-binding protein yes no 0 0 1 1 0 1 45.322 45.322 3 0.010674 12442 20230619_1880_Aki_TMTPro18x_K_F1 66.66 55.398 54101 53914 59661 36988 56679 43270 56804 41587 42941 49964 62583 37457 51670 31529 83053 29631 40053 32706 50136 49211 59933 38955 58898 43372 56860 42854 45323 49649 62714 38439 54417 32697 81229 30158 38688 31059 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35493000 4204 624 4006 7835 6388 6388 1 9606 Homo sapiens -0.07879612191163687 DKYPNLQVIGGNVVTAAQAK Unmodified 2085.1219 0.12185306 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5;B7Z1G4 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 0 1 3 0 1 57.725 57.757 3 6.4965E-17 17511 20230619_1882_Aki_TMTPro18x_K_F3 168.14 155.11 94048 76200 89891 92869 67570 93813 86515 82670 90620 123710 121950 123880 127900 113150 117250 134930 124530 130480 86927 69906 91359 92435 72616 94508 86325 86350 93472 122790 123920 125370 129850 118200 119920 134950 119120 123950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29719000 4205 1454 4007 7836 6389 6389 1 9606 Homo sapiens 0.12269700289471075 DLAACIK Unmodified 789.40547 0.40547447 274 V9HW78;B2R5M8;A0A024R3Y6;O75874;Q6FI37;Q0QER2;B4DXS4;Q9H302 HEL-216;IDH1 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 6.5 0.5 1 1 47.971 48.054 2 0.038034 12702 20230619_1887_Aki_TMTPro18x_K_F7 97.068 30.033 304620 263490 307150 278850 314490 351700 332280 321840 398220 313060 343950 314480 302800 290090 329720 357400 392860 348580 281790 241350 311750 281500 326660 349520 336040 330590 399470 317120 353510 318600 311970 303450 338430 357510 374970 331340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 183080000 4206 274 4008 7837;7838 6390;6391 6391 2 9606 Homo sapiens 0.0023479555420635734 DLAADPLNRR Unmodified 1139.6047 0.60471964 4608 Q9NVT9;E9PR92;E5RHK3;E5RJ86 ARMC1 Armadillo repeat-containing protein 1 yes no 0 0 1 6 0 1 39.372 39.46 3 0.0016732 9289 20230619_1886_Aki_TMTPro18x_K_F6 90.05 51.758 58955 56897 59475 70726 83108 86459 74269 74723 110260 72842 86314 80643 81405 70912 75814 82880 96244 88382 54579 52175 60792 70470 84241 85976 76470 77098 109200 74051 89414 81228 83020 74099 78353 83384 91833 83916 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96072000 4207 4608 4009 7839 6392 6392 1 9606 Homo sapiens 0.0405014710645446 DLAAFDK Unmodified 778.38612 0.38611924 1222 A0A140VK27;P09960;B4DVZ8;P09960-4;Q49AK0 LTA4H Leukotriene A-4 hydrolase;Leukotriene A(4) hydrolase yes no 0 0 0 4.5 0.5 1 1 51.387 51.438 2 0.038716 14658 20230619_1883_Aki_TMTPro18x_K_F4 95.531 36.549 316710 288190 321390 341960 363950 416190 361710 361000 457760 382630 456410 428210 425710 375610 389030 479050 489400 468320 293100 264200 326870 341890 374860 413950 367830 373200 460530 387150 466740 431180 433920 394550 402270 478870 467130 445000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 206950000 4208 1222 4010 7840;7841 6393;6394 6393 2 9606 Homo sapiens -0.011938374650526384 DLAALEDK Unmodified 873.44436 0.4443624 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 51.807 51.859 2 0.0024576 15264 20230619_1881_Aki_TMTPro18x_K_F2 126.41 70.401 531950 443920 479720 520700 576940 616600 604260 593120 767750 647360 696170 688300 714580 590970 647040 746750 793460 742920 491540 407060 493380 520860 592520 615810 612560 608960 769700 652860 718330 693800 725590 621110 667740 747410 757410 705860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 246990000 4209 1022;3868 4011 7842;7843 6395;6396 6395 2 9606 Homo sapiens 0.002577993895670261 DLAALGDK Unmodified 801.42323 0.42323303 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4.5 0.5 2 2 49.918 49.973 2;3 0.0056633 13950 20230619_1883_Aki_TMTPro18x_K_F4 112.84 27.778 449150 356150 392510 412420 472370 493620 500300 492860 644930 563090 600060 601310 596960 502990 526230 634270 669110 645010 414800 326590 404760 413050 485220 493110 507150 505360 646810 566640 617550 605460 606140 529060 544820 635550 638650 612610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 331740000 4210 1022;3868 4012 7844;7845;7846;7847 6397;6398 6397 2 9606 Homo sapiens 0.01457834080702014 DLADELALVDVIEDK Unmodified 1656.8458 0.84579735 3370 V9HWB9;P00338;P00338-3;P00338-4;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2;F5GZQ4;F5H5J4;F5H6W8 HEL-S-133P;LDHA L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 3 0 1 65.769 65.803 3 0.023097 20889 20230619_1882_Aki_TMTPro18x_K_F3 53.169 41.401 4290.2 3232.6 4164.8 4597.3 4352.1 3880.6 4772 3821.5 3980.6 4509 5786.4 4082.9 3544.1 4645.9 6245.8 5699 4832.7 4978.2 3964.1 2971.3 4245.6 4519.9 4506.9 3979.2 4763.1 3931.2 4170.1 4507.4 5747.5 4192.9 3825.8 4821.4 6223.2 5672 4638.6 4735.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12730000 4211 3370 4013 7848 6399 6399 1 9606 Homo sapiens 0.04364828721668346 DLAEDAPWK Unmodified 1043.4924 0.49237523 3484;3299;3886 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98;Q14315;Q14315-2;O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;A0A804HJC2 FLNA;FLNC;FLNB Filamin-A;Filamin-C;Filamin-B no no 0 0 0 3.5 0.5 1 1 54.63 54.645 2;3 0.00025219 16091 20230619_1883_Aki_TMTPro18x_K_F4 157.91 99.951 70573 62442 68870 87747 81879 96972 89912 85254 128060 93572 84280 105120 106750 91145 99620 108870 109510 121260 65277 57353 70431 86594 84354 97050 91298 88159 126500 94567 89664 105650 107940 95431 102020 109780 104760 115000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46371000 4212 3484;3886;3299 4014 7849;7850 6400;6401 6401 2 9606 Homo sapiens -0.027631266904108998 DLAEDAPWKK Unmodified 1171.5873 0.58733824 3484;3299;3886 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98;Q14315;Q14315-2;O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;A0A804HJC2 FLNA;FLNC;FLNB Filamin-A;Filamin-C;Filamin-B no no 0 0 1 6 0 1 50.747 50.824 4 0.00052325 14262 20230619_1886_Aki_TMTPro18x_K_F6 108.67 64.051 60121 60585 63203 56989 72586 74914 76620 75507 90592 85819 80418 80583 76508 65143 82276 80509 79026 81726 55696 55413 64052 58152 74722 74461 77440 77339 91109 86020 82838 81496 78482 68528 83375 80736 75661 77601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18238000 4213 3484;3886;3299 4015 7851 6402 6402 1 9606 Homo sapiens 0.00840806780774983 DLAEDLYDGQVLQK Unmodified 1605.7886 0.78861683 2705 E9PS97;B7Z952;Q9NVD7;Q9NVD7-2 PARVA Alpha-parvin yes no 0 0 0 3 0 1 61.593 61.622 3 0.027173 19094 20230619_1882_Aki_TMTPro18x_K_F3 51.643 39.667 63679 53317 81696 80355 73785 101790 101850 97901 126730 101700 96986 100800 113240 92950 91741 122460 100520 130920 59028 49022 81414 79186 78155 101120 101800 100370 126440 102610 101630 102130 114040 97740 94334 122950 96300 124150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41173000 4214 2705 4016 7852 6403 6403 1 9606 Homo sapiens 0.009954062359838645 DLAEITTLDR Unmodified 1145.5928 0.59281755 1425 A0A8I5KU76;A0A384MEE7;Q9BS26;A0A8I5KW59;A0A8I5KVZ0;A0A8I5KTR3 ERP44 Endoplasmic reticulum resident protein 44 yes no 0 0 0 2 0.816 1 1 1 54.569 54.581 2 1.0307E-17 16168 20230619_1882_Aki_TMTPro18x_K_F3 205.83 169.43 41616 33408 36686 45524 42998 44843 46078 42903 57171 49394 48723 48044 50929 43691 46478 51713 54852 57227 38439 30685 37825 44948 44251 45354 46603 44156 57267 49554 50477 48689 51713 45649 47831 52130 52417 54287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133260000 4215 1425 4017 7853;7854;7855 6404;6405 6405 2 9606 Homo sapiens 0.02584485572583617 DLAEVGEGGGHSQAR Unmodified 1481.6859 0.68588309 319 A0A024R542;Q9C0C2;Q9C0C2-2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes no 0 0 0 1.5 0.5 1 1 34.455 34.483 3 9.432E-11 7475 20230619_1881_Aki_TMTPro18x_K_F2 158.29 136.06 37427 22621 45957 43269 71661 84316 55697 62099 68228 50105 71041 84208 67850 59466 62490 36505 69831 72963 34617 20896 46354 42486 72010 81568 57483 64614 68843 52350 72699 82997 69100 60964 63894 39191 66765 68903 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91656000 4216 319 4018 7856;7857 6406;6407 6407 2 9606 Homo sapiens -0.03569241712079929 DLAEWLEK Unmodified 1002.5022 0.50221163 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8;B4DIG6;B4DWK9;B4DIW1;B4DK31 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 4 0 1 50.51 50.542 3 0.047758 14245 20230619_1883_Aki_TMTPro18x_K_F4 48.794 21.465 107330 86142 91645 102200 108170 126490 120090 110100 137680 120990 121730 110070 130510 113800 124260 133910 133320 123500 99115 79008 94734 102200 111480 125680 120880 113910 138610 121440 125970 112430 132650 118320 127010 133650 127410 117450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69575000 4217 3833 4019 7858 6408 6408 1 9606 Homo sapiens 0.0010606131498889226 DLAGCIHGLSNVK Unmodified 1382.6976 0.69763375 3600 Q53GL5;P48735;P48735-2;Q13584;B4DSZ6 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] yes no 0 0 0 4.5 3.5 1 1 49.952 49.988 3 3.3017E-08 13467 20230619_1888_Aki_TMTPro18x_K_F8 161.76 107.79 817210 688190 768270 824070 831750 982710 898860 958810 986270 979320 929210 884300 989990 893960 901330 1068600 971820 1096900 755410 631140 785910 823230 861360 980980 905310 981320 997940 985820 958470 902770 1004700 931050 922970 1072100 930010 1041100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 516370000 4218 3600 4020 7859;7860 6409;6410 6410 2 9606 Homo sapiens 0.021592837775187945 DLAGSIIGK Unmodified 872.49673 0.49673232 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;B3KU16;S4R359 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 5.33 3.09 1 1 1 54.185 54.23 3 0.0014998 15417 20230619_1887_Aki_TMTPro18x_K_F7 93.649 19.718 945960 743750 825890 904070 935630 1022500 1024400 1011100 1122400 1108300 1101200 1066200 1263500 1235900 671430 1594800 728310 1190900 873570 682370 851130 901460 965760 1024800 1030700 1036300 1137400 1114000 1136900 1091400 1257200 1286800 701760 1571600 699490 1133700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3754099999.9999995 4219 1865 4021 7861;7862;7863 6411;6412;6413 6412 3 9606 Homo sapiens 0.05538382523195651 DLAHTPSQLEGLDPATEAR Unmodified 2019.9861 0.98614743 399 G3V235;G3V2Q3;G3V5E1;A0A024R6K1;O75909-2;O75909-1;O75909;O75909-4 CCNK Cyclin-K yes no 0 0 0 3.5 0.5 1 1 49.909 49.964 3 1.8202E-07 14114 20230619_1882_Aki_TMTPro18x_K_F3 111.91 99.763 34672 24828 31329 33667 35906 37707 36934 34534 45709 36829 38492 31915 38659 29800 31261 43087 40669 37649 32010 22814 32184 33319 36967 37750 37440 35566 45758 36973 39784 32595 39091 31524 32503 42742 38800 35828 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168190000 4220 399 4022 7864;7865 6414 6414 1 9606 Homo sapiens 0.016953807079744365 DLAILQCHGELDPMVPVR Unmodified 2062.034 0.033966025 1166 Q5QPQ1;A0A140VJC9;O95372;Q5QPQ0 LYPLA2 Acyl-protein thioesterase 2 yes no 0 0 0 6 0 1 59.799 59.861 3 7.842800000000001E-24 18063 20230619_1886_Aki_TMTPro18x_K_F6 201.67 184.27 40188 35229 41333 36641 46754 52306 43418 50714 56282 50069 51171 48777 53265 46517 49396 51227 51439 59947 37186 32263 41943 37125 48070 51675 44391 51855 56404 50610 52816 49511 54121 48323 50423 51886 49256 56815 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 365250000 4221 1166 4023 7866 6415 6415 1 9606 Homo sapiens 0.04543040102817031 DLANLEVPHELPTK Unmodified 1574.8304 0.83042206 1158 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RR34;A0A0U1RRK3 GATAD2B Transcriptional repressor p66-beta yes no 0 0 0 5.5 0.5 1 1 54.578 54.65 3 0.0011126 15885 20230619_1886_Aki_TMTPro18x_K_F6 79.022 62.623 43350 35923 49616 55634 32250 47184 44910 49763 45167 41459 50109 62252 51392 46760 55593 62461 59214 40437 40136 33042 49667 54429 35277 48358 44607 50465 46165 42959 51339 61730 52636 49496 56688 61279 56490 38709 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 971430000 4222 1158 4024 7867;7868 6416 6416 1 9606 Homo sapiens 0.06600006715166273 DLAPIGIR Unmodified 853.50215 0.50215205 1085 A0A0S2Z410;Q99714;A0A804HHW5 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 7 0 1 49.071 49.155 2 0.00113 13172 20230619_1887_Aki_TMTPro18x_K_F7 148.33 33.606 353640 279200 289300 359760 381360 435410 427610 396350 528340 387530 392880 353480 439610 360020 381440 441410 423190 404290 326430 256310 301130 357540 390480 433550 431230 407410 526760 391500 411220 360930 444420 375520 391520 440040 404370 384460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2556000000 4223 1085 4025 7869 6417 6417 1 9606 Homo sapiens 0.0695410610566114 DLAQYSSNDAVVETSLTK Unmodified 1939.9375 0.93746591 3915 Q15057;A0A0U1RQT1;H7C3K3;C9J8L1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes no 0 0 0 4.5 0.5 1 1 57 57.033 3 4.2476E-05 17074 20230619_1883_Aki_TMTPro18x_K_F4 93.371 71.274 28863 26632 25748 30951 28414 32895 35718 34066 37729 34877 33678 31835 34317 31581 34463 36225 36604 40152 26687 24410 26495 30929 29513 33143 35639 34745 38158 35119 34769 32458 35032 32833 35171 36542 35026 38082 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57743000 4224 3915 4026 7870;7871 6418 6418 1 9606 Homo sapiens 0.005094673482290091 DLARPGEITQSQAFDFEFTHVEK Unmodified 2664.282 0.2819951 252 Q4G0F5;A0A024R3L9 VPS26B Vacuolar protein sorting-associated protein 26B yes no 0 0 1 6 0 1 57.318 57.39 4 1.6818999999999999E-43 17038 20230619_1886_Aki_TMTPro18x_K_F6 223.75 196.67 45242 33509 39671 45464 37843 42931 38239 41828 60045 51280 50922 68528 68147 67256 45254 87648 82704 98510 41767 30786 40764 44886 39532 43573 39219 43073 59574 51880 53516 68747 68035 70461 48726 88213 78878 93392 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67601000 4225 252 4027 7872 6419 6419 1 9606 Homo sapiens 0.016425387051640428 DLASVNNLLK Unmodified 1085.6081 0.60807369 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4.5 3.5 1 1 58.397 58.397 2;3 2.5188E-08 17177 20230619_1888_Aki_TMTPro18x_K_F8 179.51 116.79 149400 120220 159070 152840 154670 176590 176790 177690 201260 159740 174030 149610 175930 134760 169970 188310 186520 172350 138200 110340 160700 152020 161630 176750 177740 180950 202420 162160 179770 152040 179150 142390 173950 187420 178200 163920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1017899999.9999999 4226 1022;3868 4028 7873;7874 6420;6421 6421 2 9606 Homo sapiens 0.06869397160448898 DLASVQALLR Unmodified 1084.6241 0.6240581 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 61.037 61.047 2 2.7314E-16 18873 20230619_1880_Aki_TMTPro18x_K_F1 193.38 138.01 224080 195040 200360 220220 202130 257100 240240 244430 292400 200860 196170 194560 203350 178760 230630 219800 205190 222240 207100 178750 205710 220850 211230 256830 241570 249400 290810 205330 206200 197360 208670 187080 232590 220400 196690 211000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147180000 4227 1022;3868 4029 7875;7876 6422;6423 6422 2 9606 Homo sapiens 0.08513103397376653 DLASYLNYK Unmodified 1085.5393 0.53932542 2449 B3LEU8;Q6NUQ4-2;Q6NUQ4;B4DLT7;H7C0H8 TMEM214 Transmembrane protein 214 yes no 0 0 0 1 0 1 59.769 59.769 3 0.03127 18403 20230619_1880_Aki_TMTPro18x_K_F1 57.249 37.462 47443 35770 46937 49444 39326 47873 53735 48995 59716 58038 57867 62506 70477 59047 56579 74701 67870 70694 43844 32868 47634 48783 41872 48535 53525 50242 60431 58316 60035 63148 70874 61847 58502 74538 64848 67178 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18194000 4228 2449 4030 7877 6424 6424 1 9606 Homo sapiens -2.2671392571282922E-05 DLATALEQLLQAYPR Unmodified 1700.9097 0.90973501 1991 B1PL87;A8ASI8;B3KT21;P55957;P55957-2;B2ZP79;P55957-4 BID BH3-interacting domain death agonist;BH3-interacting domain death agonist p15;BH3-interacting domain death agonist p13;BH3-interacting domain death agonist p11 yes no 0 0 0 2.5 0.5 1 1 67.484 67.507 3 1.6027E-10 21795 20230619_1881_Aki_TMTPro18x_K_F2 150.11 137.34 5226.2 4961.4 2166 4196.2 4963.4 3271.6 6341.6 5348.8 3665.9 5227.8 5057.7 4017.9 5502.6 3599.7 4375.2 5412.8 5874.2 5222.7 4813.9 4535.2 2508.9 4292.6 4953.1 3436.6 6224.7 5319.4 3948.9 5246 5137.3 4125.1 5541.6 3829.3 4556.9 5395.8 5601.4 4964.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8704600 4229 1991 4031 7878;7879 6425 6425 1 9606 Homo sapiens 0.08731653669337902 DLATVAFCDAQSTQEIHEK Unmodified 2161.995 0.99499756 3668 P56545;P56545-3;P56545-2 CTBP2 C-terminal-binding protein 2 yes no 0 0 0 3.5 1.12 1 1 1 1 54.877 54.914 4 6.953E-32 16170 20230619_1883_Aki_TMTPro18x_K_F4 240.79 221.76 110960 88466 104320 106570 100440 124080 115760 110050 121300 114120 120720 116870 129570 106540 119030 125170 123140 131450 102530 81154 106500 106370 105150 123790 116020 113530 123230 115220 124260 118210 131430 111260 121480 125830 117840 124750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 278620000 4230 3668 4032 7880;7881;7882;7883 6426;6427 6427 2 9606 Homo sapiens -0.03952013717844238 DLCGIVASK Unmodified 961.49027 0.49026674 1206 A0A140VJT8;P13489;A0A024RC87;H0YCR7 RNH1 Ribonuclease inhibitor yes no 0 0 0 7.5 0.5 2 2 51.696 51.771 2;3 0.00056111 14373 20230619_1887_Aki_TMTPro18x_K_F7 131.44 72.8 261600 214560 212140 254000 246390 326010 292780 279460 336960 322590 348500 335740 377130 297800 313810 424240 386080 372220 241520 196770 220490 254150 255050 323000 293790 289850 341200 324200 358130 339230 380900 315140 324820 421030 368600 354140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1104900000 4231 1206 4033 7884;7885;7886;7887 6428;6429 6428 2 9606 Homo sapiens 0.007981213001698961 DLCMSINPIK Oxidation (M) 1205.5784 0.57842982 4791 yes no 0 1 0 3 0 1 53.71 53.763 2 0.090549 15875 20230619_1882_Aki_TMTPro18x_K_F3 53.472 32.57 + 45038 36477 43642 44707 49117 49457 52637 53228 60500 58527 63319 68633 61160 59917 61397 68623 70544 81712 41632 33466 44535 44548 50649 49751 53115 54254 61298 59170 64783 68913 62564 62533 62977 69528 67485 77431 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73525000 4232 4791 4034 7888 6430 6430 2912 1 9606 Homo sapiens -0.01613626171570104 DLCNTHLMR Oxidation (M) 1174.5223 0.52231192 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 5.5 0.5 1 1 33.715 33.778 3 0.0016722 7161 20230619_1886_Aki_TMTPro18x_K_F6 89.317 82.115 71156 50081 61974 61331 75160 74770 72472 70066 85852 70301 72340 73322 69092 61250 68034 85722 89205 75312 65669 45973 63902 61201 76929 74503 73628 71909 86134 71158 74727 73923 70624 64841 70462 85115 85050 71693 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 213930000 4233 3758 4035 7889;7890 6431;6432 6432 2433 2 9606 Homo sapiens -0.05796834288344144 DLCNTHLMR Unmodified 1158.5274 0.5273973 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 6.5 0.5 1 1 38.065 38.134 3 8.2858E-06 8793 20230619_1886_Aki_TMTPro18x_K_F6 167.12 125.14 166410 119790 164570 190280 190550 201500 186110 190870 207730 196130 206870 191540 217490 176920 163440 182800 242890 219580 153750 110280 167860 186390 195700 202600 188610 195870 210390 197820 212590 194170 219090 183410 171610 185610 231470 208260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252460000 4234 3758 4035 7891;7892 6433;6434 6433 2 9606 Homo sapiens -0.045525304257125754 DLDADREVTFLEASR Unmodified 1735.8377 0.83769228 264 Q53GC2;A0A024R3U9;P20338;A0A087WYT5 RAB4A Ras-related protein Rab-4A no no 0 0 1 2 0.816 1 1 1 53.222 53.253 3 7.827499999999999E-19 15671 20230619_1880_Aki_TMTPro18x_K_F1 207.21 187.88 40516 34793 40478 44767 42631 46173 43746 45325 53688 45373 45829 48733 51204 37699 49284 48471 52021 55263 37476 31930 41178 44404 44147 46564 44357 46368 53808 45963 47651 48939 51963 39860 50295 48915 49769 52405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 305700000 4235 264 4036 7893;7894;7895 6435 6435 1 9606 Homo sapiens -0.0007930547503747221 DLDAPDDVDFF Unmodified 1267.5245 0.52446322 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1 SRRT Serrate RNA effector molecule homolog yes no 0 0 0 1 0 1 65.54 65.54 2 0.00077289 20731 20230619_1880_Aki_TMTPro18x_K_F1 133.6 101.67 52536 41297 45473 55540 47908 54240 50716 54598 60312 60193 53887 54808 60922 50335 51447 69984 59482 65170 48512 37929 46877 54883 49687 54945 51282 55898 60680 60368 55899 55751 61505 53116 53031 69682 56873 61929 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 264400000 4236 4464 4037 7896 6436 6436 1 9606 Homo sapiens -0.09859803797917266 DLDDFQSWLSR Unmodified 1380.631 0.63099397 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 5 0 1 63.231 63.276 2 2.5854E-12 19417 20230619_1885_Aki_TMTPro18x_K_F5 212.28 173.97 314670 251210 275830 287550 277450 333550 325370 352040 432320 374310 360600 349520 387180 333720 376920 433480 375910 438950 290630 230340 283570 288130 289840 334180 328590 358780 431410 376470 374470 355600 393890 350080 383750 434120 360110 416630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 196270000 4237 2337;3778;3779 4038 7897 6437;6438 6437 2 9606 Homo sapiens -0.04409628512712516 DLDEDANGITDEGK Unmodified 1490.6373 0.63726114 4046 Q5QJE6;J3KP30 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 0 0 0 1 0 1 48.522 48.522 3 0.025517 13688 20230619_1880_Aki_TMTPro18x_K_F1 53.001 40.836 20681 19455 22662 25642 25389 31852 28069 26076 32615 28620 29627 29502 28922 30477 34069 32343 36383 33551 19156 17853 22923 25456 26256 31591 28278 27111 32839 28837 30522 29949 29832 31480 34669 32549 34769 31864 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17593000 4238 4046 4039 7898 6439 6439 1 9606 Homo sapiens -0.08843199862531037 DLDELSRYPEDK Unmodified 1478.6889 0.68890278 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 1 3.5 1.12 1 1 1 1 49.575 49.637 3 0.00020707 13801 20230619_1883_Aki_TMTPro18x_K_F4 104.17 75.191 1881500 1557400 1672300 1861000 1934800 2017900 1931400 1983000 2125600 2390000 2316100 2062400 2380400 2006000 1997100 2632000 2457400 2386600 1738300 1428300 1721100 1856600 1988400 2028500 1954100 2038700 2164000 2383200 2368100 2108100 2409400 2104400 2066500 2619200 2346300 2269600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2173300000 4239 1059 4040 7899;7900;7901;7902 6440;6441;6442 6441 3 9606 Homo sapiens -0.031294113779722466 DLDEVLQTHSVFVNVSK Unmodified 1928.9844 0.98435652 1128 A0A0S2Z5I7;Q9Y3A5;A0A8V8TMR6;A0A8V8TLA5;A0A8V8TLR8;F8WE72 SBDS Ribosome maturation protein SBDS yes no 0 0 0 7 0 1 61.258 61.297 2 6.2572E-22 18343 20230619_1887_Aki_TMTPro18x_K_F7 182.17 155.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4240 1128 4041 7903 6443 6443 1 9606 Homo sapiens 0.05702371689994834 DLDIFDR Unmodified 892.42905 0.42904669 2970 F5H1S8;Q14165;H0YG07 MLEC Malectin yes no 0 0 0 2.5 0.5 1 1 56.212 56.24 2 0.0040572 17065 20230619_1881_Aki_TMTPro18x_K_F2 150.84 88.123 104210 96560 111020 111060 116940 132370 127950 131350 161730 139570 158010 159810 165880 141320 169780 153820 164450 181900 96489 88492 112320 111290 121350 132220 129430 134450 162620 141280 162680 160700 169220 147080 172190 156010 157520 172410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94881000 4241 2970 4042 7904;7905 6444 6444 1 9606 Homo sapiens -0.021470674076226715 DLDINRPGTVPNAK Unmodified 1508.7947 0.79470526 414 Q9ULP0-6;Q9ULP0-3;H3BQJ4;A0A0S2Z5L7;A0A0S2Z5R7;Q9ULP0-8;A0A024R6V8;Q9ULP0-7;Q9ULP0-4;Q9ULP0;Q9ULP0-2;H3BPQ3;Q9ULP0-5;B3KX54;B7Z9X4 NDRG4 Protein NDRG4 yes no 0 0 1 7 0 1 44.218 44.301 3 0.00027807 11039 20230619_1887_Aki_TMTPro18x_K_F7 94.487 76.123 214470 191870 222300 341410 154470 167890 232780 230770 261360 249920 224020 184350 255160 206130 178580 280860 255120 225250 198490 176760 224860 329870 167870 184220 231100 232230 263170 249550 232600 191120 255820 215900 187720 277610 243150 214640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166240000 4242 414 4043 7906 6445 6445 1 9606 Homo sapiens 0.060659692581793934 DLDPEVFQR Unmodified 1117.5404 0.54038805 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;X6RE05 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 2 0 1 51.255 51.3 2 0.0039129 15014 20230619_1881_Aki_TMTPro18x_K_F2 93.162 69.008 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4243 4061 4044 7907 6446 6446 1 9606 Homo sapiens -0.013680527703400003 DLDSLHR Unmodified 854.42463 0.42463001 4089 Q86UY0;Q6EHZ3;Q658S9;Q8NBS9;A0A024QZV0;Q8NBS9-2 TXNDC5;STRF8;DKFZp666I134;hCG_1811539 Thioredoxin domain-containing protein 5 yes no 0 0 0 3 0 1 35.341 35.398 2 0.0051186 7725 20230619_1882_Aki_TMTPro18x_K_F3 114.43 73.309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4244 4089 4045 7908 6447 6447 1 9606 Homo sapiens -0.00840531830533564 DLDTGEEVTR Unmodified 1133.52 0.52004654 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 1 0 1 39.092 39.092 2 1.7077E-10 9668 20230619_1880_Aki_TMTPro18x_K_F1 217.2 147.3 254480 180380 221940 241040 331340 350700 245720 260690 369560 303400 393210 440020 371690 352740 356010 350290 457090 445000 234860 165730 229860 239740 333440 344230 256590 273650 370190 308710 401640 437340 379630 366480 367810 357400 436280 421700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 784270000 4245 307 4046 7909 6448 6448 1 9606 Homo sapiens -0.041372682208020706 DLDVITIPSK Unmodified 1099.6125 0.61249036 1621 B0AZS5;A0A6Q8PFA6;A0A6Q8PH57;O00139-2;A0A6Q8PGH7;A0A6Q8PG37;B4DM85;O00139-1;O00139-5;O00139;O00139-4;A0A6Q8PGG1;D6R9M0 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 6.5 0.5 1 1 58.904 58.961 3 0.0071364 17402 20230619_1887_Aki_TMTPro18x_K_F7 70.412 26.642 39522 32155 38523 46509 35434 44122 42118 41416 44757 49654 45973 39548 47438 40787 41429 56926 49912 49731 36536 29553 39224 45732 37268 44712 42171 42728 45529 49432 47130 40692 48096 42885 42789 56495 47672 47311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93854000 4246 1621 4047 7910;7911 6449 6449 1 9606 Homo sapiens 0.06666861583380523 DLEAAGAER Unmodified 930.44067 0.44067401 4161 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 1 0 1 35.836 35.836 2 0.00012547 8318 20230619_1880_Aki_TMTPro18x_K_F1 151.48 96.704 55702 31054 64012 68013 53797 59698 52526 57284 64349 55298 83297 100260 70919 66010 76969 31363 100790 85536 51467 28763 64190 65471 56653 60880 53474 58685 65559 57347 84153 98414 73109 67410 79205 35266 96102 80724 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60276000 4247 4161 4048 7912 6450 6450 1 9606 Homo sapiens -0.027328703842840696 DLEADEEDTR Unmodified 1191.4891 0.48914034 2657 Q6IBR8;B5BU01;P20042;Q3B7I9;Q59GZ3 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 1 0 1 37.5 37.5 2 2.9474E-19 8977 20230619_1880_Aki_TMTPro18x_K_F1 254.82 222.6 126600 76210 84757 119310 104970 190240 102620 116100 262930 174710 186860 343200 289640 274430 125800 329510 401890 491690 116550 70204 90173 117680 108440 185030 108450 125320 255550 178860 200550 338040 285140 288270 147170 338570 382480 464960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 262400000 4248 2657 4049 7913 6451 6451 1 9606 Homo sapiens -0.09894466325704343 DLEAEHVEVEDTTLNR Unmodified 1868.8752 0.8752 4509 Q9H3K6;H3BTW0;A0A499FJE1;H3BVE0;Q9H3K6-2;A0A0B4J295 BOLA2 BolA-like protein 2 yes no 0 0 0 1.5 0.5 1 1 45.587 45.628 3 3.157E-08 12629 20230619_1880_Aki_TMTPro18x_K_F1 131.72 111.06 19703 14062 15806 17108 17299 17396 17340 16346 22203 18376 21624 18656 23698 20232 19259 20974 23937 24917 18174 12907 16407 17032 17856 17552 17631 16832 22309 18486 22278 18996 23914 20866 19929 21281 22865 23621 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 993490000 4249 4509 4050 7914;7915 6452 6452 1 9606 Homo sapiens -0.024482590001071003 DLEAENRR Unmodified 1001.489 0.48902118 4023 Q59EK9-4;Q59EK9-2;Q59EK9-3;Q59EK9 RUNDC3A RUN domain-containing protein 3A yes no 0 0 1 1 0 1 28.167 28.167 3 0.0029436 5280 20230619_1880_Aki_TMTPro18x_K_F1 92.439 50.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4250 4023 4051 7916 6453 6453 1 9606 Homo sapiens -0.011663767443792494 DLEAHIDSANK Unmodified 1211.5782 0.57823012 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 0 3 0.816 1 1 1 41.68 41.741 3 4.5765E-09 10268 20230619_1883_Aki_TMTPro18x_K_F4 176.78 152.79 264300 216800 256740 256600 307340 315590 317320 326470 374770 359640 389950 362130 385980 309550 321030 379490 397870 373730 244340 198830 262190 256730 315380 314980 321150 333520 379130 361760 398920 365860 390890 324830 332140 379750 379770 355120 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 373410000 4251 148 4052 7917;7918;7919 6454;6455;6456 6455 3 9606 Homo sapiens -0.01909586575538924 DLEALLNSK Unmodified 1001.5393 0.53932542 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80;A0A6Q8PGH0 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 6.29 1.03 2 2 2 1 61.428 61.473 2;3 0.00021106 18756 20230619_1886_Aki_TMTPro18x_K_F6 156.92 84.684 508400 447230 460070 626850 652690 799620 732980 761720 875230 724930 734230 811200 811790 663180 766980 845810 768710 890480 469950 410770 475550 620090 665730 794110 738380 779590 877650 737450 763960 814550 823790 698770 781290 849270 736320 844860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6438199999.999999 4252 1428 4053 7920;7921;7922;7923;7924;7925;7926 6457;6458;6459 6458 3 9606 Homo sapiens 0.038617328607642776 DLEALVTDK Unmodified 1002.5233 0.523341 3919 Q15124 PGM5 Phosphoglucomutase-like protein 5 yes yes 0 0 0 3.5 0.5 1 1 60.158 60.187 2;3 0.0027868 18390 20230619_1883_Aki_TMTPro18x_K_F4 107.47 43.9 22951 19089 19590 24855 26218 34165 31946 29528 36359 29412 30771 34517 32903 29201 30365 35210 27780 35613 21199 17522 20327 24734 26913 33714 31989 30484 36546 29903 31956 34626 33398 30605 30810 35296 26659 33793 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7945000 4253 3919 4054 7927;7928 6460;6461 6461 2 9606 Homo sapiens 0.022180266238592594 DLEAPEVQESYR Unmodified 1434.6627 0.66268803 731 P46379-3;P46379;P46379-2;A0A7I2V508;A0A0G2JK23;A0A024RCR6;A0A1U9X7A6;A0A1U9X7A9;A0A7P0MQS5 BAG6;BAT3 Large proline-rich protein BAG6 yes no 0 0 0 1.5 0.5 1 1 46.323 46.363 2 2.6432E-13 12875 20230619_1880_Aki_TMTPro18x_K_F1 214.82 154.8 101240 84072 90196 98502 91559 103970 100880 101740 118450 120290 124220 127470 139770 118690 113500 137120 138250 135770 93536 77091 92615 98378 95316 104690 101740 104590 119940 120800 127860 128790 140920 123700 117370 137360 132020 128980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55851000 4254 731 4055 7929;7930 6462;6463 6462 2 9606 Homo sapiens -0.03725680549428034 DLEASIAR Unmodified 873.4556 0.45559579 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2.5 0.5 1 1 42.845 42.919 2 0.0033239 10862 20230619_1882_Aki_TMTPro18x_K_F3 107.01 27.556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4255 3881 4056 7931;7932 6464;6465 6465 2 9606 Homo sapiens 0.01380621483701816 DLECVTNLQEVAR Unmodified 1545.7457 0.74570615 1666 A0A7I2V4K5;B4E324;X6R5C5;Q59EV6;X6R8A1;P10619-2;P10619;A0A7I2V4D1;A0A7I2YQT8;A0A7I2V3B2;Q5JZH0 CTSA;PPGB Carboxypeptidase;Lysosomal protective protein;Lysosomal protective protein 32 kDa chain;Lysosomal protective protein 20 kDa chain yes no 0 0 0 3.5 0.5 1 1 53.837 53.853 2 8.0524E-28 15755 20230619_1883_Aki_TMTPro18x_K_F4 259.35 199.44 55068 48611 48844 61164 70181 84159 73213 64872 89406 82752 70610 67866 87907 61818 57029 78626 67338 64949 50897 44596 50552 60998 71377 82894 74077 68082 89460 82267 74030 69356 87622 64911 59221 77919 64312 61843 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 248300000 4256 1666 4057 7933;7934 6466;6467 6467 2 9606 Homo sapiens -0.005336870931159865 DLEDESTPIVK Unmodified 1244.6136 0.61361257 466 A0A024R7P3;A0A024R7N2;Q9HD20-2;Q9HD20;Q8NC73;Q6ZUA1;Q9HD20-3;Q8TEG5 ATP13A1;FLJ00232 Manganese-transporting ATPase 13A1 yes no 0 0 0 2 0 1 50.226 50.278 3 0.00027829 14584 20230619_1881_Aki_TMTPro18x_K_F2 104.52 74.085 64317 43024 58955 63403 64016 68296 67732 70787 81954 74838 84684 78636 84235 74773 72368 88701 84675 98050 59363 39584 60435 62403 66205 68730 68531 72242 82767 75549 86682 79580 85450 77999 74573 89382 80990 92981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71865000 4257 466 4058 7935 6468 6468 1 9606 Homo sapiens 0.001090311616053441 DLEDGEVPQHAGK Unmodified 1393.6474 0.64737232 517 A0A024R8H6;Q15059;A0A140F1N4;Q15059-2 BRD3 Bromodomain-containing protein 3 yes no 0 0 0 1.5 0.5 1 1 39.807 39.842 3 0.0071244 9769 20230619_1881_Aki_TMTPro18x_K_F2 68.676 39.377 52345 45420 53773 61562 72679 78280 66286 60331 81121 71059 76986 75129 79660 70941 75300 92034 113880 89515 48431 41704 54837 61024 73825 77472 67639 63179 81626 71416 79289 75993 81089 74413 78855 91953 108420 85138 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 270510000 4258 517 4059 7936;7937 6469 6469 1 9606 Homo sapiens -0.03370547346639796 DLEDKEGEIQAGAK Unmodified 1501.726 0.72601657 3849 Q13409-2;Q13409-3;Q13409-6;Q13409;Q13409-5;Q13409-7;A0A140VKE9;B4DPZ3;Q59GU5;E7EQL5 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 1 2 0 1 47.324 47.4 3 4.1709E-13 13245 20230619_1881_Aki_TMTPro18x_K_F2 162.72 125.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4259 3849 4060 7938 6470 6470 1 9606 Homo sapiens -0.0047773983217211935 DLEDLFYK Unmodified 1041.5019 0.50187728 3844 Q13242;A8K3M9;H0YIB4;S4R3G0;B4DFT9 SRSF9 Serine/arginine-rich splicing factor 9 yes no 0 0 0 4.5 0.5 1 1 62.704 62.73 2 0.0056633 19168 20230619_1885_Aki_TMTPro18x_K_F5 121.62 61.766 229520 212100 206440 251320 200400 243220 220080 219190 274950 296100 292230 294500 303200 270780 265160 320010 287780 354020 212230 194430 211820 250430 209480 246020 222520 227710 277840 295100 299470 298210 307370 282730 271890 322520 275590 335640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 409000000 4260 3844 4061 7939;7940 6471 6471 1 9606 Homo sapiens -0.017213584048704433 DLEDQEQLLR Unmodified 1257.6201 0.62009493 294 A0A087WYJ2;A0A024R4F4;A0A2R8Y705;Q308M6;M0R2B7;P28340 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit yes no 0 0 0 1 0 1 49.629 49.629 2 9.7897E-11 14195 20230619_1880_Aki_TMTPro18x_K_F1 163.91 125.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4261 294 4062 7941 6472 6472 1 9606 Homo sapiens 0.001589691129993298 DLEDRYNQLLK Unmodified 1405.7201 0.72014333 2857 Q3V6T2;D6W5D1;Q3V6T2-2;A0A2U3TZV9;A0A2R8Y7B1;Q3V6T2-3;Q3V6T2-4;Q3V6T2-5;A0A2R8YG73;A0A2R8Y4X4;A0A2R8Y4W8;A0A2R8Y820;A0A2R8Y885;A0A2R8YDS8;A0A2R8Y7D4;H7C2C6;H0Y470;Q9ULK8;H0Y7U8;Q9NW05 CCDC88A;KIAA1212 Girdin yes no 0 0 1 6 0 1 51.381 51.458 3 0.012228 14561 20230619_1886_Aki_TMTPro18x_K_F6 68.44 42.723 140570 117690 126890 128430 140470 140500 135770 147700 179970 116600 113430 97479 118460 93040 132770 122350 115190 117650 129890 107850 130220 129060 144700 141400 138530 149510 178030 119040 119670 99793 121390 97726 133730 122250 110400 111790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79398000 4262 2857 4063 7942 6473 6473 1 9606 Homo sapiens 0.03351206446791366 DLEDSLAR Unmodified 917.44543 0.44542503 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 1 0 1 44.159 44.159 2 3.7428E-06 11928 20230619_1880_Aki_TMTPro18x_K_F1 193.96 149.52 189440 157370 159810 224510 284340 313500 322170 286640 420320 238880 269900 282580 259450 233920 276620 265720 288280 307870 174960 144600 167190 222170 286690 309520 325190 293450 415970 245710 283670 283270 266130 244560 281570 268920 275850 291900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180650000 4263 1428 4064 7943 6474 6474 1 9606 Homo sapiens -0.01659986241520528 DLEDSTLR Unmodified 947.45599 0.45598972 4141 Q70UQ0-4 yes yes 0 0 0 1 0 1 41.251 41.251 2 0.00030767 10637 20230619_1880_Aki_TMTPro18x_K_F1 166.96 71.34 72413 55903 61555 70587 74524 76965 78417 81488 116130 78117 99780 104210 100700 77656 82037 101790 110550 104160 66852 51313 63680 70161 76541 77455 79978 82847 115350 79981 103170 103740 101850 82272 85428 101980 105450 98932 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46123000 4264 4141 4065 7944 6475 6475 1 9606 Homo sapiens -0.01984003587085681 DLEEAEEYK Unmodified 1124.4873 0.48734943 2886 E5RIW3;Q6FGD7;E5RJD8;O75347;E5RHG6;E5RIX8 TBCA Tubulin-specific chaperone A yes no 0 0 0 1.5 0.5 2 2 49.271 49.3 2;3 3.0254E-06 14143 20230619_1881_Aki_TMTPro18x_K_F2 149.82 100.1 476580 386910 411880 437740 396360 431120 396160 405590 508950 526790 591220 596630 579190 481580 485490 672900 633810 667990 440170 354690 423620 437920 413250 436060 403190 419460 515450 527980 602060 598830 587090 510660 504580 672240 605220 634390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3311899999.9999995 4265 2886 4066 7945;7946;7947;7948 6476;6477 6477 2 9606 Homo sapiens -0.06991475343670572 DLEEAEGR Unmodified 917.40904 0.40903953 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 1 0 1 36.301 36.301 2 7.8488E-14 8483 20230619_1880_Aki_TMTPro18x_K_F1 183.74 55.256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4266 3654 4067 7949 6478 6478 1 9606 Homo sapiens -0.05296863138232766 DLEEAGGLGTEFSELPGK Unmodified 1847.8789 0.8788884 2830 D3DVC4;P48681;Q2YDX4;Q9H6U9 NES Nestin yes no 0 0 0 2 0 1 61.836 61.845 3 2.3701E-09 19426 20230619_1881_Aki_TMTPro18x_K_F2 122.1 110.84 89070 72189 84831 79254 80165 86515 94747 95907 111760 85319 75880 61701 91530 61692 78060 101780 81028 90719 82324 66161 86425 79619 84038 87174 95204 97017 111420 86119 80129 63833 92189 65846 79914 100930 77566 86247 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50250000 4267 2830 4068 7950 6479 6479 1 9606 Homo sapiens -0.011135892262473135 DLEEDHACIPIK Unmodified 1438.6762 0.67622961 3447 P13639;Q8TA90;B4DPU3;Q6PK56 EEF2 Elongation factor 2 yes no 0 0 0 2.5 1.12 1 1 1 1 48.019 48.066 3 1.2687E-05 13577 20230619_1880_Aki_TMTPro18x_K_F1 132.32 102.63 2278900 2044100 2159500 2135300 1601400 1773400 2193600 2391400 2115900 2983900 2916000 2777600 3437700 2697100 2486300 4042600 3489300 3815200 2107600 1871900 2195000 2146500 1723000 1836100 2177300 2415500 2195700 2975100 2975200 2829300 3445900 2857000 2609100 4022700 3331100 3624900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 8593300000 4268 3447 4069 7951;7952;7953;7954 6480;6481;6482;6483 6480 4 9606 Homo sapiens -0.02556146041865759 DLEEDHACIPIKK Unmodified 1566.7712 0.77119262 3447 P13639;Q8TA90;B4DPU3;Q6PK56 EEF2 Elongation factor 2 yes no 0 0 1 5 1.41 1 1 1 1 1 45.878 45.952 4 7.6746E-11 11996 20230619_1885_Aki_TMTPro18x_K_F5 179.02 136.82 339590 294700 317730 310140 320790 434070 348190 347970 417670 415460 382480 332760 439230 345140 381830 416860 345430 300170 313960 269920 324670 313670 334490 427460 351670 363070 420380 413920 396210 342160 443480 359430 387450 411220 330540 286510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6973799999.999999 4269 3447 4070 7955;7956;7957;7958;7959 6484 6484 1 9606 Homo sapiens 0.01047787429320124 DLEEELER Unmodified 1031.4771 0.47711909 3010 Q96PC5;Q96PC5-10;Q59FD2;Q96PC5-12;Q96PC5-7;G3V599;Q96PC5-9;Q96PC5-14;Q96PC5-8;Q96PC5-6;Q96PC5-5;Q96PC5-13;Q96PC5-11;Q86UF2;A4D2H0;A0A5F9ZHA4;A0A2R8YE69;P0CG41;Q8IX94;A4FU28;Q2VIL8 MIA2;CTAGE6;CTAGE15;CTAGE8;CTAGE4;CTAGE9 Melanoma inhibitory activity protein 2;cTAGE family member 6;cTAGE family member 15;cTAGE family member 8;cTAGE family member 4;cTAGE family member 9 yes no 0 0 0 1 0 1 47.509 47.509 2 0.0022496 13331 20230619_1880_Aki_TMTPro18x_K_F1 129.72 92.163 53730 47044 46187 54183 54553 60201 52626 54953 72695 61291 66129 62880 72332 53539 55010 73249 73087 67799 49646 43123 47717 54210 56008 60311 53793 56669 72637 61681 68378 63484 72768 56606 57338 72930 69717 64473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42266000 4270 3010 4071 7960 6485 6485 1 9606 Homo sapiens -0.03736038278225351 DLEEFFSTVGK Unmodified 1270.6081 0.60813326 1482 Q14498;Q14498-2;B4E1M7;A0A384NQ03;Q68DD9;B3KWX7;B4DLM0;Q6N037;B4DRA0;E1P5S2;Q6MZY7;B7Z4L7;Q14498-3;Q7Z3L0;H0Y4X3;G3XAC6;A0A0U1RQH7;Q5QP23;Q5QP22 RBM39;DKFZp781C0423;DKFZp686A11192;RNPC2;DKFZp686C17209;DKFZp781I1140 RNA-binding protein 39 yes no 0 0 0 5.6 1.02 1 1 2 1 63.736 63.772 2;3 0.0018916 19921 20230619_1883_Aki_TMTPro18x_K_F4 82.171 57.316 42315 40663 47963 51825 45748 53965 45633 45864 60196 49698 52675 45862 55741 41337 54114 49254 50067 47999 39213 37299 48242 51437 47729 54214 46483 47529 60176 49937 54488 46603 56667 43241 54804 49318 47928 45610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1476499999.9999998 4271 1482 4072 7961;7962;7963;7964;7965 6486;6487 6486 2 9606 Homo sapiens -0.016346476302032897 DLEELGANPCLTNSK Unmodified 1659.7774 0.77740021 1529 A0A3B3IUB9;A0A8V8TR92;A0A8V8TQB4;Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes no 0 0 0 4 0 1 54.735 54.747 3 0.00022336 16115 20230619_1883_Aki_TMTPro18x_K_F4 102.28 87.586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4272 1529 4073 7966 6488 6488 1 9606 Homo sapiens -0.02609739129798072 DLEGAVSR Unmodified 845.4243 0.42429566 4506 Q9H307;A8K964;G3V5F0;G3V579 PNN Pinin yes no 0 0 0 2 0 1 38.403 38.466 2 0.047426 9105 20230619_1881_Aki_TMTPro18x_K_F2 71.692 31.625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4273 4506 4074 7967 6489 6489 1 9606 Homo sapiens -0.0045995155037417135 DLEGENIEIVFAKPPDQK Unmodified 2041.0368 0.036786022 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2YQV8;B7Z213;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 1 4.75 0.829 2 1 1 60.266 60.295 3;4 1.9325E-18 18418 20230619_1883_Aki_TMTPro18x_K_F4 172.56 157.3 294020 244230 282910 300510 266230 306420 293880 300780 287050 368140 339690 360640 381270 338910 346430 426830 367180 427740 271810 224060 288170 298960 278640 309280 294690 309470 295400 368050 348050 365720 386240 354920 354500 427310 351530 406040 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1998599999.9999998 4274 1680;2265 4075 7968;7969;7970;7971 6490;6491;6492;6493 6490 4 9606 Homo sapiens 0.057909100329652574 DLEGGHGMR Oxidation (M) 986.42398 0.42397808 4597 Q9NUL7 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 0 1 0 1 0 1 25.792 25.792 3 0.045626 4476 20230619_1880_Aki_TMTPro18x_K_F1 45.161 29.722 2871 3346.5 2315.2 2729.7 2602.9 3874.1 3089.9 4358.1 4739.6 4255.6 3743.1 6832.9 4343 4676.5 4146.7 1962.4 5203.6 5310.6 2657.5 3056.5 2406.5 2826.1 2706.4 3841.4 3139.4 4411.4 4695.9 4382.9 3934.6 6725.8 4412.1 4750.1 4265.5 2211.6 4969.3 5008.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1628500 4275 4597 4076 7972 6494 6494 2821 1 9606 Homo sapiens -0.06977694541865276 DLEGGHGMR Unmodified 970.42906 0.42906346 4597 Q9NUL7 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 0 0 0 2 0 1 30.341 30.406 3 0.0001133 5868 20230619_1881_Aki_TMTPro18x_K_F2 137.14 106.56 22373 18292 24621 23625 28175 32760 29251 28194 36937 23207 34862 36493 34192 24815 28179 30328 35022 34904 20704 16790 24876 23539 29031 32319 29663 28990 37045 24148 35838 36058 34608 26288 29149 30638 33442 33104 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11792000 4276 4597 4076 7973 6495 6495 1 9606 Homo sapiens -0.05733390679256445 DLEGLSQR Unmodified 916.46141 0.46140945 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16 MYH9 Myosin-9 yes no 0 0 0 2.5 0.5 1 1 41.656 41.725 2 7.5358E-05 10357 20230619_1882_Aki_TMTPro18x_K_F3 183.89 89.354 228980 173880 209970 210550 241800 280310 281740 286660 373230 321480 337310 325070 340410 269620 256850 387480 381840 338780 211490 159550 215420 210600 250000 278260 284490 293200 373440 323230 347670 328150 343380 286200 270260 384350 363840 322450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 442960000 4277 148 4077 7974;7975 6496 6496 1 9606 Homo sapiens -0.00016280004615509824 DLEGSDIDTR Unmodified 1119.5044 0.50439647 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DM67 CSE1L Exportin-2 yes no 0 0 0 1.5 0.5 1 1 40.224 40.26 2 2.0058E-13 10181 20230619_1880_Aki_TMTPro18x_K_F1 219.97 162.8 420510 318630 352550 389180 449590 502530 424970 436580 599150 528540 541730 547650 561300 462040 436910 589590 592910 551280 388130 292400 365460 388660 459210 498050 435220 452890 598170 530050 559180 552220 566420 486170 455910 587850 565500 524160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1001099999.9999999 4278 1462 4078 7976;7977 6497 6497 1 9606 Homo sapiens -0.05057554737868486 DLEGYRETR Unmodified 1137.5415 0.54145068 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;Q9BXJ9-4;A0A8V8TQT7;A4FU51;Q6N069;Q6N069-2;Q6N069-5;Q6N069-4;Q6N069-3 NAA15;NARG1;NARG1L;NAA16 N-alpha-acetyltransferase 15, NatA auxiliary subunit;N-alpha-acetyltransferase 16, NatA auxiliary subunit yes no 0 0 1 2 0 1 34.365 34.421 3 0.00093478 7436 20230619_1881_Aki_TMTPro18x_K_F2 94.309 65.148 37225 43471 39034 28447 46592 32814 36395 37957 41681 42628 42458 34808 43254 29093 37242 44882 47639 33842 34526 39651 39520 30117 47377 33082 37476 38523 42228 42581 43502 35535 43792 31059 38586 44209 45385 32311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18661000 4279 2297 4079 7978 6498 6498 1 9606 Homo sapiens -0.02181838401429559 DLELPDMHMR Unmodified 1255.5689 0.56892776 952 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;A0A994J5J9;Q8IXK0-2;Q8IXK0-4;Q8IXK0;Q8IXK0-5;Q8IXK0-3 PHC2 Polyhomeotic-like protein 2 yes no 0 0 0 3 0 1 50.834 50.904 3 0.00010569 14563 20230619_1882_Aki_TMTPro18x_K_F3 108.43 93.741 31367 22295 29662 29656 28758 38673 29449 29711 35647 31542 35015 32664 37859 30586 35787 39723 33359 36361 28967 20483 30265 29454 30031 38193 29857 31019 35930 31833 36066 33067 38435 32104 36317 39572 31962 34560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40772000 4280 952 4080 7979 6499 6499 1 9606 Homo sapiens -0.048633944570610765 DLENGSHIR Unmodified 1039.5047 0.50467125 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 2.5 0.5 1 1 31.171 31.245 3 2.458E-06 6179 20230619_1881_Aki_TMTPro18x_K_F2 176.33 128.04 71938 50142 76340 72167 102600 97367 91190 92969 95637 85376 89184 69250 80271 62005 67827 56431 78893 57009 66491 46111 77536 71395 104030 96456 92748 95030 96920 86212 91267 70803 81574 63955 69726 56888 75225 54222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127650000 4281 1104 4081 7980;7981 6500 6500 1 9606 Homo sapiens -0.013500902273335669 DLENLGER Unmodified 944.45632 0.45632407 3764 P82932 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 0 0 0 2 0 1 42.554 42.634 2 0.0069124 11032 20230619_1881_Aki_TMTPro18x_K_F2 100.25 54.565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4282 3764 4082 7982 6501 6501 1 9606 Homo sapiens -0.018125838672403916 DLEPESDR Unmodified 959.4196 0.41960421 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 0 1 0 1 35.244 35.244 2 0.0010173 8067 20230619_1880_Aki_TMTPro18x_K_F1 150.88 100.25 52735 26825 57625 64734 77512 84491 63522 72012 75643 57182 81086 94042 78568 73662 77000 32105 90186 86695 48685 24904 58467 62424 78559 83571 65268 74025 76518 59733 82921 92972 80237 74488 78791 36148 86138 81777 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67588000 4283 2896 4083 7983 6502 6502 1 9606 Homo sapiens -0.06172880483802601 DLEQGDVSETIR Unmodified 1360.647 0.64703797 3615 P49916-3;P49916;B7Z6I3;P49916-4;P49916-2;K7ERZ5;K7EQB6 LIG3 DNA ligase 3;DNA ligase yes no 0 0 0 1 0 1 44.53 44.53 2 1.5722E-05 12119 20230619_1880_Aki_TMTPro18x_K_F1 162.68 131.19 44095 33720 31888 36918 37159 54839 43564 44480 55577 48641 47051 51657 50272 40654 39796 50145 55939 56096 40663 30910 33540 37252 38514 53824 43908 46248 55588 49047 48834 51909 50715 42820 41598 50538 53367 53217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86464000 4284 3615 4084 7984 6503 6503 1 9606 Homo sapiens -0.018859670664596706 DLEQQDCEIAQEIQEK Unmodified 1974.8841 0.88405013 4204 Q8IVM0;Q8IVM0-2 CCDC50 Coiled-coil domain-containing protein 50 yes no 0 0 0 2 0 1 58.076 58.091 3 3.892E-06 17891 20230619_1881_Aki_TMTPro18x_K_F2 114.27 104.49 16356 13434 16732 19994 14233 17267 17668 18439 19972 20790 20511 20288 22552 18327 17946 24580 24003 23221 15127 12351 16950 19608 15086 17685 17694 18824 20245 20866 21102 20561 22734 19303 18701 24503 22902 22072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91455000 4285 4204 4085 7985 6504 6504 1 9606 Homo sapiens -0.0643965342590036 DLESAEER Unmodified 947.4196 0.41960421 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O95325 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 1 0 1 35.127 35.127 2 6.9918E-11 8009 20230619_1880_Aki_TMTPro18x_K_F1 236.09 125.05 73090 35230 77686 89996 124270 126950 88395 101550 109890 80380 118180 117280 105780 92703 96298 50946 127900 115830 67446 32755 79285 86717 124380 124890 91911 104900 110950 83549 120300 116470 107930 94297 99563 55660 121990 109370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158410000 4286 2361 4086 7986 6505 6505 1 9606 Homo sapiens -0.05620880483797919 DLESAEERR Unmodified 1103.5207 0.52071524 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O95325 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 1 1 0 1 31.559 31.559 3 3.1549E-09 6592 20230619_1880_Aki_TMTPro18x_K_F1 214.83 155.03 94449 71639 87141 96705 127260 111290 103790 103000 145810 113910 118540 118230 123420 89597 101520 114200 142530 116330 87239 65808 89747 95764 128250 111310 107270 106090 145040 114740 123080 118850 124720 94741 105930 114450 135790 110560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174630000 4287 2361 4087 7987 6506 6506 1 9606 Homo sapiens -0.026904287811021277 DLESLFHR Unmodified 1015.5087 0.50869399 1473 Q03252;A0A384NPH0 LMNB2 Lamin-B2 yes no 0 0 0 5.5 0.5 1 1 52.143 52.218 3 4.3246E-11 14849 20230619_1886_Aki_TMTPro18x_K_F6 205.7 131.57 120100 115150 113240 125650 93126 100900 123780 128150 120150 128940 131730 138530 118700 112910 109150 119210 133600 157040 111120 105470 115370 125780 99105 104590 122980 129090 123080 130470 134090 139270 121200 117660 112570 121780 127750 148670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150430000 4288 1473 4088 7988;7989 6507;6508 6508 2 9606 Homo sapiens 0.0015599926639424666 DLETQPHMQEFR Oxidation (M) 1545.6882 0.68819127 2554 B4DNM8;Q32P28-4;Q32P28;Q32P28-3;E2QRI1;B4DTG8;Q32P28-2 LEPRE1;P3H1 Prolyl 3-hydroxylase 1 yes no 0 1 0 2 0 1 36.668 36.727 3 0.0041051 8409 20230619_1881_Aki_TMTPro18x_K_F2 70.563 65.386 17464 11618 22439 18745 27607 31142 24749 27576 38742 23796 24717 28743 31465 24689 30071 25660 29694 33516 16168 10701 22438 18503 28208 30451 25547 28295 38081 24437 26344 28805 31824 25673 30556 26224 28441 31736 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37275000 4289 2554 4089 7990 6509 6509 1550 1 9606 Homo sapiens -0.06282529298687223 DLETQPHMQEFR Unmodified 1529.6933 0.69327665 2554 B4DNM8;Q32P28-4;Q32P28;Q32P28-3;E2QRI1;B4DTG8;Q32P28-2 LEPRE1;P3H1 Prolyl 3-hydroxylase 1 yes no 0 0 0 3 0 1 42.148 42.21 3 0.040721 10577 20230619_1882_Aki_TMTPro18x_K_F3 47.227 41.933 65051 61482 53786 66089 79282 98203 68095 76462 141920 78971 109900 137590 125710 125620 73102 142050 177900 201010 60122 56306 56043 66769 80309 96354 71541 79670 138880 81645 115030 136630 125570 130810 81427 145530 169360 190210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19352000 4290 2554 4089 7991 6510 6510 1 9606 Homo sapiens -0.05038225436078392 DLETSCSDIR Unmodified 1194.5187 0.51866633 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;O95654 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 0 0 1.5 0.5 1 1 39.73 39.765 2 5.5812E-10 9965 20230619_1880_Aki_TMTPro18x_K_F1 213.98 166.13 116560 88164 101060 114610 126380 138260 122530 133150 154650 141100 145070 141600 162600 130660 121900 161340 171190 157810 107610 80956 104410 113850 129250 137880 124770 136530 155370 142230 149980 143410 163460 136800 127600 161330 163220 149980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161670000 4291 1717 4090 7992;7993 6511 6511 1 9606 Homo sapiens -0.0708122558123705 DLEWVER Unmodified 945.4556 0.45559579 3090 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 0 0 0 2 0 1 50.543 50.595 2 0.013784 14699 20230619_1881_Aki_TMTPro18x_K_F2 113.5 52.817 131050 124770 132070 133940 150270 177600 157260 147600 169160 143780 148740 129350 149280 101380 163410 105810 144840 99369 121310 114260 134390 135120 154920 175600 158500 152750 170790 145130 153520 131000 152810 105860 164550 106110 138450 94616 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106280000 4292 3090 4091 7994 6512 6512 1 9606 Homo sapiens -0.019313785162808017 DLFDLNSSEEDDTEGFSER Unmodified 2203.9029 0.90293089 4730 Q9Y3T9;Q9H9J5;Q8NAK7 NOC2L Nucleolar complex protein 2 homolog yes no 0 0 0 1 0 1 61.716 61.716 2 2.8168E-09 19167 20230619_1880_Aki_TMTPro18x_K_F1 160.31 155.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4293 4730 4092 7995 6513 6513 1 9606 Homo sapiens -0.15086445321185238 DLFDPIIEDR Unmodified 1231.6085 0.60846762 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;G3V4N7;G3V461 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 0 3 1.58 1 1 1 1 61.725 61.741 2 4.3216E-19 19364 20230619_1881_Aki_TMTPro18x_K_F2 249.03 204.05 4938000 4452200 4560100 5183000 3257700 3411300 4302200 4279600 4510500 6046400 6556300 6350500 6390100 5937800 6034100 7019300 6167000 7057900 4566000 4081100 4647200 5152900 3513900 3606700 4287900 4362400 4669200 6021700 6622000 6420500 6512200 6193500 6155500 7035900 5905400 6699900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 10280000000 4294 3441 4093 7996;7997;7998;7999 6514;6515;6516 6515 3 9606 Homo sapiens 0.0019277208966741455 DLFDSMDK Unmodified 969.41135 0.41134771 1976 A6NJA2;B2RD79;P54578-2;P54578-3;P54578;D3DUG9;B3KTG4 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 3.5 0.5 1 1 56.928 56.947 2 0.0032072 17176 20230619_1882_Aki_TMTPro18x_K_F3 120.07 46.143 85571 65955 69037 81981 60090 84246 79435 79942 111010 111990 102390 114790 116730 99674 84576 123900 120330 133130 78970 60530 71473 81490 63885 84881 79940 82828 111000 111570 106120 115830 117200 104610 88763 124510 114870 126300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120550000 4295 1976 4094 8000;8001 6517 6517 1 9606 Homo sapiens -0.07458150724778534 DLFEDELVPLFEK Unmodified 1592.7974 0.7973906 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2V5Q6;F6UXX1;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 4.5 1.71 1 1 1 1 1 1 65.65 65.677 3 2.6175E-06 21060 20230619_1881_Aki_TMTPro18x_K_F2 135.6 114.04 214150 179590 214490 198050 185750 210850 208030 228650 222680 244670 240200 270490 260890 231550 229320 288920 253800 280700 198050 164580 217310 198820 195850 212700 209100 232720 226890 247090 246730 272060 264180 243090 235440 288780 242780 266600 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1165200000 4296 1680;2265 4095 8002;8003;8004;8005;8006;8007 6518;6519;6520;6521;6522;6523 6518 6 9606 Homo sapiens 0.024703798724885928 DLFEPQTALLR Unmodified 1301.698 0.69795133 4044 Q5JWT2;Q9ULK4-6;Q9ULK4-2;Q9ULK4-4;Q9ULK4-5;Q9ULK4-3;Q9ULK4 MED23 Mediator of RNA polymerase II transcription subunit 23 yes no 0 0 0 6 0 1 60.614 60.672 2 0.0048206 18396 20230619_1886_Aki_TMTPro18x_K_F6 89.731 65.882 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4297 4044 4096 8008 6524 6524 1 9606 Homo sapiens 0.05917026769043332 DLFGSLNVK Unmodified 991.53385 0.53384611 2425 B3KVD6;Q9UHD4 CIDEB Cell death activator CIDE-B yes no 0 0 0 7.67 0.471 1 2 56.23 56.288 2;3 0.00087775 16285 20230619_1888_Aki_TMTPro18x_K_F8 87.476 29.878 464690 300130 476380 337510 453970 685880 514380 496840 104280 654370 643790 763350 825810 703800 646000 757230 814100 712050 429210 275400 482040 342560 475330 662300 503240 524490 153340 655100 644090 767510 828360 730590 669870 757380 776590 677160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 566040000 4298 2425 4097 8009;8010;8011 6525;6526 6526 2 9606 Homo sapiens 0.03774054068958321 DLFHGATFVPR Unmodified 1258.6459 0.64585618 2259 B2R894;Q96DV4 MRPL38 39S ribosomal protein L38, mitochondrial yes no 0 0 0 1.5 0.5 1 1 51.18 51.203 3 1.7404E-09 14842 20230619_1880_Aki_TMTPro18x_K_F1 165.66 134.48 78778 64965 74609 87432 88133 96672 100820 92458 103080 83650 93242 85735 94532 74977 94084 105150 81555 89379 72815 59656 76433 86540 90796 96940 100950 94542 104420 85109 96159 86672 96365 79289 95056 104270 78207 85031 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 270910000 4299 2259 4098 8012;8013 6527;6528 6527 2 9606 Homo sapiens 0.026879081459355803 DLFHIPPSYK Unmodified 1215.6288 0.62880913 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;Q9BZZ5-5;Q9BZZ5-6;B4DDR3;H0YER7 API5 Apoptosis inhibitor 5 yes no 0 0 0 2 0 1 53.817 53.845 3 0.040994 16106 20230619_1881_Aki_TMTPro18x_K_F2 57.348 38.251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4300 4478 4099 8014 6529 6529 1 9606 Homo sapiens 0.029619875401522222 DLFHVEQR Unmodified 1042.5196 0.51959303 2857 Q3V6T2;D6W5D1;Q3V6T2-2;A0A2U3TZV9;A0A2R8Y7B1;Q3V6T2-3;Q3V6T2-4;Q3V6T2-5;A0A2R8YG73;A0A2R8Y4X4;A0A2R8Y4W8;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y885;A0A2R8YDS8;A0A2R8Y7D4;H7C2C6;H0Y470;Q9ULK8;H0Y7U8;A0A2R8Y5D7;Q9NW05;A0A2R8Y802 CCDC88A;KIAA1212 Girdin yes no 0 0 0 4 0 1 42.531 42.574 3 0.0023287 10656 20230619_1883_Aki_TMTPro18x_K_F4 93.267 33.467 40605 31634 33843 40418 41205 43477 45261 50827 52799 49009 51137 47302 59010 45324 47828 64415 55308 50217 37483 29039 35093 40137 42334 43899 45637 51342 53297 49573 52854 48090 59418 47829 49334 63582 52811 47866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30758000 4301 2857 4100 8015 6530 6530 1 9606 Homo sapiens 3.401640651645721E-05 DLFPYDK Unmodified 896.42798 0.42798405 4171 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;M0R0J3;Q59H67;A0A087WT54 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 0 0 0 4.5 0.5 1 1 54.99 55.029 2 0.042184 15867 20230619_1885_Aki_TMTPro18x_K_F5 89.752 30.547 147070 147060 134980 154720 156900 169260 165440 154680 231400 178550 181010 166510 176860 153180 170560 189730 191710 193700 136090 134630 138580 155850 161580 169810 168260 159700 229840 178960 187790 169200 180400 160400 174820 190230 183240 183930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104540000 4302 4171 4101 8016;8017 6531 6531 1 9606 Homo sapiens -0.024372817765197397 DLFPYEESK Unmodified 1126.5183 0.51825563 2314 B2RDE8;A0A384NPW1;P51858;A8K8G0;B7Z958;P51858-2;P51858-3 HDGF Hepatoma-derived growth factor yes no 0 0 0 3.5 0.957 1 2 2 1 55.194 55.228 2;3 1.0666E-05 16284 20230619_1883_Aki_TMTPro18x_K_F4 172.23 102.23 1213000 1038100 1088900 1293400 1319200 1491700 1348300 1318400 1752700 1479700 1448600 1338100 1447300 1262100 1319300 1621900 1361700 1500200 1121000 952330 1121200 1287400 1354000 1489300 1369800 1363100 1750100 1483400 1499600 1362900 1471400 1323300 1347900 1616400 1303400 1425700 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1832899999.9999998 4303 2314 4102 8018;8019;8020;8021;8022;8023 6532;6533;6534;6535;6536 6535 5 9606 Homo sapiens -0.03994277238757604 DLFQVAFNR Unmodified 1108.5665 0.56654322 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 1.5 0.5 1 1 60.73 60.735 2 9.1227E-06 18794 20230619_1880_Aki_TMTPro18x_K_F1 175.44 153.31 185150 165330 163590 184750 167100 182330 197190 195300 215930 221250 207050 203310 229010 179230 220190 254360 224300 240640 171140 151500 168170 185010 174130 184920 197650 199320 218670 221630 213830 206480 232510 189730 224480 253520 214680 228650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 177050000 4304 3881 4103 8024;8025 6537;6538 6537 2 9606 Homo sapiens 0.01660261191796053 DLFTCTIK Unmodified 996.49502 0.49501776 2126 A8K8U1;Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 4.5 3.5 1 1 55.841 55.872 2 0.00029523 16795 20230619_1880_Aki_TMTPro18x_K_F1 167.24 94.203 373220 303850 323330 349830 314150 374560 367160 360200 389140 431650 386140 360730 450040 334590 350500 526360 434430 460960 344710 278590 332660 349910 328780 376570 367850 370860 395460 430190 398870 368870 452320 356360 363790 521600 415030 438420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 244570000 4305 2126 4104 8026;8027 6539;6540 6539 2 9606 Homo sapiens -0.003369945570625532 DLFVPRPVLR Unmodified 1210.7186 0.71862719 3008 G3V529;Q9GZR7;B4DM03;Q59FS7 DDX24 ATP-dependent RNA helicase DDX24 yes no 0 0 1 4.5 0.5 1 1 50.948 50.98 3 0.00097071 14367 20230619_1883_Aki_TMTPro18x_K_F4 96.015 73.279 126520 125690 125840 153580 147650 141910 136790 141100 147890 160720 139560 124920 149770 122820 135990 175690 149120 136370 117140 115230 128350 152630 151180 144450 138930 144740 149880 160270 143940 128470 151870 129550 139470 173380 142460 129990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217820000 4306 3008 4105 8028;8029 6541;6542 6541 2 9606 Homo sapiens 0.12169661939356047 DLGCHVELR Unmodified 1097.5288 0.52877751 4114 Q6NXE6-2;Q6NXE6;B4E1N1;H0YH65;H0YGL0 ARMC6 Armadillo repeat-containing protein 6 yes no 0 0 0 3.5 0.5 1 1 38.746 38.794 3 8.6992E-05 9082 20230619_1882_Aki_TMTPro18x_K_F3 140.45 110.19 60950 43325 53960 55794 61446 69897 59138 63899 82444 64017 69540 68006 86181 70338 63178 77825 74996 73612 56259 39790 55518 55502 63249 69459 60488 65674 82119 64871 72643 68973 86326 72881 65379 77817 71632 69967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145200000 4307 4114 4106 8030;8031 6543 6543 1 9606 Homo sapiens -0.016085730653230712 DLGEEHFK Unmodified 973.45051 0.45051041 2776 CON__P02769 yes yes 0 0 0 2.5 1.12 1 1 1 1 42.1 42.146 3 0.0019873 10783 20230619_1881_Aki_TMTPro18x_K_F2 108.81 68.376 + 486420 1512800 1775900 585470 6236800 6443100 2804800 2907100 5294900 1491700 1775800 2084100 792100 1166800 1440300 1363700 2205100 3019500 467520 1374500 1756300 745190 6031700 5991700 3098600 3169500 5103800 1612600 1946400 2057100 877040 1244400 1495300 1459200 2108000 2847400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2272200000 4308 2776 4107 8032;8033;8034;8035 6544;6545;6546 6544 3 9606 Homo sapiens -0.03727682378894315 DLGEIGGIIGTNDVK Unmodified 1499.7831 0.78313752 1036 O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;A0A7I2V581;Q57Z91;O60282-2;A0A7I2V352;A0A7I2YQQ7;A0A7I2V3V4;Q3LIE3 KIF5C;Nbla04137 Kinesin heavy chain isoform 5C;Kinesin-like protein yes no 0 0 0 5 0 1 61.91 61.958 3 0.073721 18791 20230619_1885_Aki_TMTPro18x_K_F5 39.033 25.127 72384 65793 83977 87722 76089 86788 82709 90341 102780 83722 80533 75076 87002 66846 70139 91037 84215 80223 67067 60390 84246 86774 79854 87892 83667 91857 102650 84730 83900 76380 87763 70532 72510 90428 80412 76325 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28950000 4309 1036 4108 8036 6547 6547 1 9606 Homo sapiens 0.05323727444215365 DLGFNGAPYR Unmodified 1108.5302 0.53015772 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 7 0 1 48.38 48.467 2 0.037905 12880 20230619_1887_Aki_TMTPro18x_K_F7 76.17 57.767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4310 4746 4109 8037 6548 6548 1 9606 Homo sapiens -0.019766157049161848 DLGGFDEDAEPR Unmodified 1319.563 0.56297399 83 G3V1E2;A0A5F9UJX7;A0A024R0A9;A0A5F9UP49;A0A024R084;Q9BRK5-4;Q9BRK5-3;Q9BRK5-6;Q9BRK5;H0Y3T6 SDF4 45 kDa calcium-binding protein yes no 0 0 0 1 0 1 48.292 48.292 2 1.7555E-17 13632 20230619_1880_Aki_TMTPro18x_K_F1 228.84 222.17 63836 46708 48080 52911 54678 72324 69957 68277 77948 73324 71073 47311 86536 64381 48380 76148 69636 52786 58868 42837 50308 53188 56819 71540 69867 70125 78690 73082 73708 49899 85965 66505 51186 74955 66305 50446 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111860000 4311 83 4110 8038 6549 6549 1 9606 Homo sapiens -0.08402498163400196 DLGGLPIVAK Unmodified 981.58588 0.58588168 719 A0A024RCF9;A8K5B0;Q9UH62 ARMCX3 Armadillo repeat-containing X-linked protein 3 yes no 0 0 0 4.5 3.5 1 1 58.071 58.095 2;3 0.0081931 17714 20230619_1880_Aki_TMTPro18x_K_F1 97.635 68.548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4312 719 4111 8039;8040 6550;6551 6550 2 9606 Homo sapiens 0.09435217482712233 DLGLAFEIPPHMK Unmodified 1466.7592 0.75917137 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 8 0 1 60.087 60.124 3 0.00058136 17808 20230619_1888_Aki_TMTPro18x_K_F8 90.926 73.49 44482 39167 44246 41286 42695 47999 47281 44238 48284 50038 50514 47842 56594 42547 56557 56828 50620 57565 41149 35872 44926 41636 44592 47958 47448 45612 49246 50191 51987 48512 57516 44851 57188 56916 48538 54642 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26670000 4313 1661 4112 8041 6552 6552 1 9606 Homo sapiens 0.04446215476809812 DLGLDPGK Unmodified 813.42323 0.42323303 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;B4DN49;B4DL39;B4DSB9 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 4 0 1 48.422 48.462 2 0.018161 13258 20230619_1883_Aki_TMTPro18x_K_F4 90.657 54.777 255790 217270 223710 244160 229030 251300 243310 218420 301010 270690 295440 289860 299990 250640 258630 339400 339270 283700 236330 199140 230110 244490 238020 252920 246260 226950 303070 271470 303490 292210 304130 264440 268600 336290 323450 270260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96535000 4314 3585 4113 8042 6553 6553 1 9606 Homo sapiens 0.009058340807200693 DLGLSESGEDVNAAILDESGK Unmodified 2117.9964 0.99643735 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 2 0 1 61.58 61.59 3 8.2801E-23 19304 20230619_1881_Aki_TMTPro18x_K_F2 182.34 168.3 83597 74492 83154 90725 82615 103130 92863 97439 105190 100060 100650 108170 112660 90722 112360 116010 97138 122270 77339 68314 84562 90450 86233 103190 93444 99996 106300 101230 104080 108850 114530 95527 113450 116510 93262 115980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106900000 4315 909 4114 8043 6554 6554 1 9606 Homo sapiens -0.017841011480868474 DLGMEPHR Oxidation (M) 969.43381 0.43381449 1227 Q53FT8;A0A140VK45;P20618;Q59GN1 PSMB1 Proteasome subunit beta type;Proteasome subunit beta type-1 yes no 0 1 0 1.5 0.5 1 1 29.617 29.652 3 0.0022408 5546 20230619_1881_Aki_TMTPro18x_K_F2 99.136 62.375 33170 24482 33716 36751 49302 40313 36742 49314 47460 33200 40159 39396 36482 33565 37077 32026 41511 35531 30657 22520 34434 36149 49545 40717 38134 49286 47415 34609 41382 39525 37402 34723 37905 32429 39633 33732 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15781000 4316 1227 4115 8044;8045 6555;6556 6556 764 2 9606 Homo sapiens -0.05212506536497585 DLGMEPHR Unmodified 953.4389 0.43889987 1227 Q53FT8;A0A140VK45;P20618;Q59GN1 PSMB1 Proteasome subunit beta type;Proteasome subunit beta type-1 yes no 0 0 0 3 0 1 34.404 34.465 3 0.0029154 7389 20230619_1882_Aki_TMTPro18x_K_F3 99.136 68.969 27978 37241 33588 31666 38613 42578 36925 38682 38235 37753 39810 43944 42943 37648 41547 34049 61290 50648 26015 34012 33718 32620 39644 42169 37384 39748 38956 38390 40945 44084 43694 38873 43310 35229 58377 47969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53739000 4317 1227 4115 8046 6557 6557 1 9606 Homo sapiens -0.039682026738887544 DLGNMEENK Unmodified 1048.4495 0.44952413 3867 Q13740-2;F5GXJ9;Q13740;H7C543;Q13740-4 ALCAM CD166 antigen yes no 0 0 0 2.5 0.5 1 1 44.402 44.48 2 3.1471E-08 11901 20230619_1881_Aki_TMTPro18x_K_F2 206.23 149.51 137440 108770 144320 151160 286310 286940 270770 273000 380450 254950 199830 200670 315330 181680 183240 270680 261820 235700 127120 99934 148270 150900 285650 279500 276940 279100 374080 257260 218420 205610 311450 193160 193440 268330 249570 224330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157480000 4318 3867 4116 8047;8048 6558;6559 6558 2 9606 Homo sapiens -0.07276264810138855 DLGNMEENK Oxidation (M) 1064.4444 0.44443876 3867 Q13740-2;F5GXJ9;Q13740;H7C543;Q13740-4 ALCAM CD166 antigen yes no 0 1 0 2 0 1 38.047 38.11 3 0.0010874 8945 20230619_1881_Aki_TMTPro18x_K_F2 95.09 79.199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4319 3867 4116 8049 6560 6560 2539 1 9606 Homo sapiens -0.08520568672747686 DLGPHHFNVLAFPCNQFGQQEPDSNK Unmodified 2995.3671 0.36713849 4396 Q96SL4 GPX7 Glutathione peroxidase 7 yes yes 0 0 0 7.5 0.5 1 1 55.705 55.767 4 2.401E-05 16049 20230619_1888_Aki_TMTPro18x_K_F8 84.947 78.072 35390 23717 28841 37296 25988 30752 32386 34054 39369 38406 34034 41129 39685 37203 38887 54010 45117 47000 32637 21838 29852 36439 27434 31649 32504 34690 39514 38663 35474 41503 40324 39365 39986 53565 43120 44708 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184240000 4320 4396 4117 8050;8051 6561 6561 1 9606 Homo sapiens -0.05073039100625465 DLGQIEENDLVR Unmodified 1399.6943 0.69432251 4644 Q9P265;Q96IB4 DIP2B Disco-interacting protein 2 homolog B yes no 0 0 0 1 0 1 52.914 52.914 2 3.0681E-07 15546 20230619_1880_Aki_TMTPro18x_K_F1 159.44 149.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4321 4644 4118 8052 6562 6562 1 9606 Homo sapiens 0.010463122045166529 DLGQPAAAAGHFQR Unmodified 1437.7113 0.71130998 3496 P23610 F8A1 Factor VIII intron 22 protein yes yes 0 0 0 7 0 1 39.347 39.41 3 4.4991E-06 9028 20230619_1887_Aki_TMTPro18x_K_F7 119.88 101.55 56784 45899 53486 53518 59608 57718 64620 62114 72947 54178 62968 57753 60625 48771 60223 55837 71762 68061 52477 42089 54693 53502 61511 58175 65109 62947 73374 55313 64945 58192 61928 51013 61854 56694 68524 64529 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76580000 4322 3496 4119 8053 6563 6563 1 9606 Homo sapiens 0.009962776009615482 DLGTESQIFISR Unmodified 1364.6936 0.69359423 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q8TB95;B3KVE3 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 0 5 0.816 1 1 1 54.593 54.646 2 1.6823E-09 15648 20230619_1885_Aki_TMTPro18x_K_F5 199.43 141.47 453610 400390 435010 428480 440670 495060 452430 443090 519070 504000 490170 475840 544050 451230 492750 535870 537570 552130 419510 366760 443470 431490 457780 494530 457660 457870 524070 505370 506550 483590 551080 470890 504680 537940 514010 524190 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1390800000 4323 2533 4120 8054;8055;8056 6564;6565;6566 6565 3 9606 Homo sapiens 0.025835175554675516 DLGVFIPAPMAQGMR Unmodified 1601.8058 0.80580399 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;Q2TU89;H0YCH5 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 3 0 1 63.115 63.145 2 3.9621E-07 19720 20230619_1882_Aki_TMTPro18x_K_F3 128.51 108.31 45637 37762 32032 43355 34832 43109 42730 45769 60365 32354 26654 27790 30959 25781 26940 31606 32088 28495 42098 34620 33789 43319 36274 43663 43140 46213 59074 33331 29126 28358 31290 26972 27773 31483 30627 27111 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22833000 4324 3752 4121 8057 6567 6567 1 9606 Homo sapiens 0.02897332036422995 DLHDANTDLIGR Unmodified 1338.6528 0.65279205 90 B4DKS0;A0A024R0H1;P53985;B4E106;B2R6A5;Q5T8R3;Q5T8R5;P53985-2 SLC16A1 Monocarboxylate transporter 1 yes no 0 0 0 2.5 0.5 1 1 42.116 42.187 3 1.5123E-10 10548 20230619_1882_Aki_TMTPro18x_K_F3 191.26 148.54 221600 60719 154210 176980 210900 183520 225410 219420 312260 216190 221160 240280 290460 212890 202640 244900 195950 262840 203540 56887 163210 169070 214890 185790 228920 221600 309340 219570 234250 241890 289830 222380 207490 246470 188010 249210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 959710000 4325 90 4122 8058;8059 6568 6568 1 9606 Homo sapiens -0.002988237641602609 DLHQGIEAASDEEDLR Unmodified 1796.8177 0.81768512 1004 A0A0C4DGG1;B4DUI2;D3DQR0;Q9UKS6;E9PIY1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 yes no 0 0 0 1 0 1 44.746 44.746 3 3.6131E-34 12187 20230619_1880_Aki_TMTPro18x_K_F1 260.44 203.3 98748 76861 80418 92501 91558 91200 92956 97312 106640 110750 121550 99694 138420 104410 89999 123050 112530 115140 91142 70515 83439 92124 94241 92502 94098 99337 108500 110870 124530 101980 138340 108600 93795 122820 107470 109440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174570000 4326 1004 4123 8060 6569;6570 6569 2 9606 Homo sapiens -0.048851012056729815 DLHQNCPHCQVMYCSAECR Oxidation (M) 2479.9548 0.95482256 2618 B4DX46;Q6GMV2;C9IYN9 SMYD5 SET and MYND domain-containing protein 5 yes no 0 1 0 4 0 1 33.457 33.51 4 0.027562 6932 20230619_1883_Aki_TMTPro18x_K_F4 51.524 51.396 4021.5 2373.1 5429.4 5383.4 5420.4 4713.3 4123.3 4517.4 6599.7 5269.3 7599.9 6329.1 5735.8 4811.4 6600.4 5103.7 6345.7 6069.8 3722.9 2198.8 5394.6 5175.6 5587.5 4811.3 4314.6 4650.6 6614.6 5319.8 7660 6329 5952.2 5029.7 6674.1 5183.5 6072.1 5755.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7150600 4327 2618 4124 8061 6571 6571 1573 1 9606 Homo sapiens -0.22595666247525514 DLIADLK Unmodified 786.44872 0.4487195 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;E5RJF5;E5RK63;A0A0S2Z301;E5RI05;E5RFF0;E5RIU8;E5RJR0;A0A0S2Z377 ANXA6 Annexin A6;Annexin no no 0 0 0 5.5 0.5 1 1 57.594 57.658 3 0.018574 16928 20230619_1885_Aki_TMTPro18x_K_F5 79.116 20.135 61823 52060 54209 58387 61816 71388 63181 59778 75936 74082 73818 76382 76366 71582 77723 83336 85206 85792 57118 47715 55843 58620 63705 70945 64011 62260 76573 74200 75980 77271 77979 74594 79453 83682 81456 81457 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188110000 4328 1062;1064 4125 8062;8063 6572 6572 1 9606 Homo sapiens 0.04695308603152171 DLIDYVR Unmodified 892.46543 0.46543219 4722 Q9Y3C1;D6RIC3;A0A0C4DGU5;Q9Y3C1-3;Q9Y3C1-2;Q9P0T8 NOP16 Nucleolar protein 16 yes no 0 0 0 4 0 1 53.504 53.523 2 0.0066915 15599 20230619_1883_Aki_TMTPro18x_K_F4 131.04 57.998 138350 121390 119670 140040 142480 168380 140740 147940 219450 159130 152150 146530 169150 134510 146570 186220 164900 180950 127850 111280 123600 140250 146440 167640 144380 152810 216290 160010 159940 149010 171010 141940 150680 185870 157710 171860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288150000 4329 4722 4126 8064 6573 6573 1 9606 Homo sapiens 0.01489809489100935 DLIHDQDEDEEEEEGQR Unmodified 2084.8407 0.84066499 3993 Q53FE8;Q9UNZ2;Q9UNZ2-5;F2Z2K0;Q9UNZ2-4;R4GNE6 NSFL1C NSFL1 cofactor p47 yes no 0 0 0 1 0 1 39.094 39.094 3 1.5860000000000002E-71 9676 20230619_1880_Aki_TMTPro18x_K_F1 326.05 318.23 80675 53211 70634 80682 86126 106430 105200 89255 125710 127830 114620 115670 134880 98825 106420 159140 142600 121380 74431 48977 72920 79499 88878 105210 105510 93409 126530 126780 118990 117450 135610 105710 111000 156680 135940 115760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 408790000 4330 3993 4127 8065 6574 6574 1 9606 Homo sapiens -0.15836171669479882 DLIIEQR Unmodified 885.49198 0.4919813 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7BZC3 HDLBP Vigilin yes no 0 0 0 3 0 1 45.037 45.11 2 0.048383 11880 20230619_1882_Aki_TMTPro18x_K_F3 86.953 18.039 188490 136740 172160 180050 175680 211930 209180 195830 258870 225510 252530 236910 246630 201650 217210 231470 260870 236370 174050 125600 176380 178670 183340 211440 210460 201990 260500 226760 258990 238830 250480 210790 223870 232380 249010 224540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142140000 4331 292 4128 8066 6575 6575 1 9606 Homo sapiens 0.04465498380432109 DLILADYGK Unmodified 1006.5335 0.53351176 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q53GM6 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 5 0 1 57.619 57.678 2 0.0053365 16953 20230619_1885_Aki_TMTPro18x_K_F5 93.598 64.854 93252 69225 88931 101540 75626 91437 100520 89886 112110 192960 177850 181670 205530 159500 144220 209050 204930 208520 86145 63657 90591 99710 80348 93172 100310 94719 116530 189010 180540 184120 205890 167970 151440 209040 195510 198040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73414000 4332 1863 4129 8067 6576 6576 1 9606 Homo sapiens 0.030506343490856125 DLILNPR Unmodified 839.4865 0.48650199 3931 Q15393;A8K6V3;B3KQH1;B3KM77;Q15393-3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 6 0.816 1 1 1 46.671 46.753 2 0.066849 12487 20230619_1886_Aki_TMTPro18x_K_F6 78.616 51.091 393280 297180 348500 387090 392640 369950 428180 381040 501870 476830 485940 526700 565820 470600 417370 519540 611990 698900 363140 272890 358580 383280 404970 375830 431790 391290 506560 478380 502930 530340 568020 490240 438330 530970 584270 661600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 306900000 4333 3931 4130 8068;8069;8070 6577 6577 1 9606 Homo sapiens 0.06033819588606093 DLILPTIQK Unmodified 1039.6277 0.6277465 2863 E1NZA1;Q92616;A0A024RBS1;B4DM32 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 4.5 3.5 1 1 59.928 59.946 3 0.00053283 17790 20230619_1888_Aki_TMTPro18x_K_F8 111.61 100.7 95454 85528 101510 98280 94978 117920 105700 111810 122310 116270 112970 121450 125060 116270 126250 127960 124930 139150 88362 78390 102510 98499 99561 117590 106510 114730 123320 117450 116970 122860 127380 120700 128300 129030 119640 132000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 196110000 4334 2863 4131 8071;8072 6578;6579 6579 2 9606 Homo sapiens 0.10951773171223067 DLILQCLDDKDESIR Unmodified 1831.8986 0.89857798 1855 A0A8V8TQW4;O14617-4;O14617;O14617-5;O14617-2;Q6PK82;O14617-3;A0A2R8Y4J3 AP3D1 AP-3 complex subunit delta-1 yes no 0 0 1 4.5 0.5 1 1 59.24 59.268 3 0.0003016 17560 20230619_1885_Aki_TMTPro18x_K_F5 92.439 73.403 43694 31595 41368 48086 35120 38583 44258 44484 44510 51645 50412 46223 52589 45506 44246 57081 52813 56535 40355 29070 42163 47064 37213 39858 44124 45243 45600 51627 51508 47173 53216 47581 45686 57104 50474 53689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 479500000 4335 1855 4132 8073;8074 6580 6580 1 9606 Homo sapiens 0.01590463512820861 DLIQDQNMDEK Oxidation (M) 1363.5926 0.59255956 4506 Q9H307;A8K964 PNN Pinin yes no 0 1 0 1.5 0.5 1 1 44.552 44.593 3 0.00078724 12145 20230619_1880_Aki_TMTPro18x_K_F1 90.614 69.064 62371 46835 54225 56021 77879 78356 73076 67777 94116 50134 64114 63408 61676 53222 56813 56629 68357 62460 57581 42971 56124 56113 78885 77312 74552 69508 93336 52114 67076 63450 62824 55411 58489 57187 65252 59285 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195240000 4336 4506 4133 8075;8076 6581 6581 2799 1 9606 Homo sapiens -0.07469302209551643 DLIQDQNMDEK Unmodified 1347.5976 0.59764493 4506 Q9H307;A8K964 PNN Pinin yes no 0 0 0 1 0 1 48.647 48.647 3 0.00028093 13825 20230619_1880_Aki_TMTPro18x_K_F1 104.3 83.509 30410 22002 28949 31445 29887 35428 34526 27912 33081 39832 44133 41620 44545 34560 34231 43512 37778 42825 28088 20228 29564 31015 31105 35339 34495 29377 34246 39666 44750 41939 44928 36370 35240 43516 36146 40664 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33390000 4337 4506 4133 8077 6582 6582 1 9606 Homo sapiens -0.06224998346920074 DLISHDEMFSDIYK Oxidation (M) 1727.7713 0.7712522 986 A0A0P1J1R0;Q5W0H4;A0A0B4J2C3;P13693;B4DKJ4;Q9UP43;B4DLD6 TPT1 Translationally-controlled tumor protein yes no 0 1 0 4 0 1 54.388 54.403 3 4.1792E-05 15987 20230619_1883_Aki_TMTPro18x_K_F4 97.86 83.173 269090 218550 255880 276470 304770 356670 294580 299200 380980 275590 313680 271100 296110 273430 265680 345440 314260 321440 248700 200570 261910 275420 312760 353170 300250 308950 380200 279970 323900 275880 301550 285660 273830 344390 300260 305540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 273150000 4338 986 4134 8078 6583 6583 559 1 9606 Homo sapiens -0.063522573613227 DLISHDEMFSDIYK Unmodified 1711.7763 0.77633758 986 A0A0P1J1R0;Q5W0H4;A0A0B4J2C3;P13693;B4DKJ4;Q9UP43;B4DLD6 TPT1 Translationally-controlled tumor protein yes no 0 0 0 4 0 1 58.999 59.002 3 5.5702E-05 17927 20230619_1883_Aki_TMTPro18x_K_F4 97.273 78.44 338810 283720 346500 392980 327180 412740 363630 356180 302530 402160 373470 384040 391050 319300 380790 424540 362150 422260 313390 260610 351390 387960 342520 414370 362850 369120 315030 403180 380800 388470 397890 337160 386640 424660 347100 400870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1396200000 4339 986 4134 8079 6584 6584 1 9606 Homo sapiens -0.05107953498691131 DLIVAEA Unmodified 729.39087 0.39087027 2029 Q6LES9;A8K3S0;P40937;A8K4Z2;Q59GW7;P40937-2 RFC5 Replication factor C subunit 5 yes no 0 0 0 1.5 0.5 1 1 56.02 56.03 2 0.023246 16819 20230619_1880_Aki_TMTPro18x_K_F1 100.82 88.917 61580 48331 55680 59322 47465 52180 56555 53477 62916 53635 55348 48590 59997 46828 54789 62285 54310 54836 56881 44348 56946 58922 50213 53346 56704 54577 63409 54064 57305 49549 60809 49195 55821 61905 51971 52160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113820000 4340 2029 4135 8080;8081 6585 6585 1 9606 Homo sapiens 0.01535046677702212 DLIVSGDEK Unmodified 974.49204 0.49204087 2710 Q8TEQ6;B7ZLC9;Q58EZ8 GEMIN5 Gem-associated protein 5 yes no 0 0 0 3 0 1 47.91 47.99 2 0.0012338 13206 20230619_1882_Aki_TMTPro18x_K_F3 134.77 69.929 61819 47907 54437 63987 80537 81335 67213 67978 92334 76617 90143 86367 84172 77434 73335 99819 96921 91181 57087 44000 56351 63491 81237 80634 69304 70595 92508 77320 92278 86995 85649 81303 76212 99389 92465 86717 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58123000 4341 2710 4136 8082 6586 6586 1 9606 Homo sapiens 0.0037745358977190335 DLIVTPATILK Unmodified 1182.7224 0.72237516 634 A0A024RAV0;P54687-4;P54687;P54687-5;P54687-3;P54687-2;F5H2F2 BCAT1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 0 0 1.5 0.5 1 1 62.442 62.447 3 2.7679E-11 19468 20230619_1880_Aki_TMTPro18x_K_F1 157.97 124.09 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4342 634 4137 8083;8084 6587;6588 6587 2 9606 Homo sapiens 0.13832286922570347 DLKPENIMLNHQGHVK Oxidation (M) 1887.9625 0.96251564 2453 B4DDM0;P23443-4;P23443-3;P23443-5;P23443-2;P23443 RPS6KB1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase beta-1 yes no 0 1 1 8 0 1 40.798 40.79 5 0.021038 9828 20230619_1888_Aki_TMTPro18x_K_F8 55.011 44.195 46820 35084 43551 45223 50966 51808 48283 52209 61259 50540 68175 59658 55522 52265 57386 55511 72484 68444 43246 32214 44626 44926 52274 51904 49259 53252 61880 51462 69008 59942 57203 54322 59142 56463 69178 64886 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29557000 4343 2453 4138 8085 6589 6589 1512 1 9606 Homo sapiens 0.05405288460474367 DLKPENIVLQQGEQR Unmodified 1765.9323 0.93226137 2043 E5RGW5;Q32ND9;G3V105;A8K4I7;O14920-3;O14920;A0A7I2V4L0;A0A7P0NCV2;Q59GL9;A0A7P0SVL5;B4E0A7;B4DP95;A0A499FJS7;O14920-4;O14920-2 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes no 0 0 1 6 0 1 48.86 48.938 3 2.3033E-05 13461 20230619_1886_Aki_TMTPro18x_K_F6 107.61 83.071 26637 21853 24785 23474 28775 31472 31718 31687 33928 30158 30602 26029 30528 25282 31783 32824 51856 35338 24617 20023 25387 23694 29652 31228 31874 32300 34300 30442 31529 26615 31246 26517 33401 32998 49307 33599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51372000 4344 2043 4139 8086 6590 6590 1 9606 Homo sapiens 0.07993253066911166 DLKPQNLLIDDK Unmodified 1410.7718 0.77184455 56 A0A024QZP7;Q5H9N4;P06493;I6L9I5;E5RIU6 CDC2;DKFZp686L20222;CDK1 Cyclin-dependent kinase 1 yes no 0 0 1 7 0 1 54.202 54.266 4 0.0013554 15454 20230619_1887_Aki_TMTPro18x_K_F7 93.206 61.978 51414 44253 49493 53125 42759 57570 47708 49234 61864 70209 62587 62948 70100 60602 48164 74241 68665 63625 47542 40582 50365 52978 45192 57670 48279 51430 62317 69615 64477 64144 70288 63298 50636 73720 65466 60562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32193000 4345 56 4140 8087 6591 6591 1 9606 Homo sapiens 0.08288950140695306 DLKPQNLLINEK Unmodified 1423.8035 0.80347903 672 F5H6Z0;B4DGP5;A0A024RBH0;Q00537-2;Q00537 CDK17;PCTK2 Cyclin-dependent kinase 17 yes no 0 0 1 1 0 1 53.019 53.019 3 0.0023388 15574 20230619_1880_Aki_TMTPro18x_K_F1 80.522 60.141 20144 18411 23645 21143 21807 24292 24620 20952 25450 24497 24069 18886 25884 20635 24832 24964 24195 21133 18667 16873 23687 21178 22860 24254 24686 21738 25830 24409 24810 19508 26298 21465 25234 24806 23134 20124 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20444000 4346 672 4141 8088 6592 6592 1 9606 Homo sapiens 0.1085294289466674 DLKPQNLLINTEGAIK Unmodified 1765.9938 0.993799 653 A0A024RB77;G3V5T9;P24941;A0A024RB10;P24941-2;E7ESI2;B4DDL9 CDK2 Cyclin-dependent kinase 2 yes no 0 0 1 1 0 1 58.307 58.307 3 9.6474E-06 17817 20230619_1880_Aki_TMTPro18x_K_F1 108.34 94.373 57918 51593 52688 58074 55063 72011 60452 53002 65832 73807 61867 50121 71264 52911 55106 71657 58536 49622 53545 47279 54040 58290 57254 71315 60794 56024 66684 72778 63981 52085 71612 55503 56599 70434 55912 47397 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207790000 4347 653 4142 8089 6593 6593 1 9606 Homo sapiens 0.14144184766246326 DLKPSNIFLVDTK Unmodified 1488.8188 0.81879474 1711 A0A7P0TAL9;A0A7P0TBA9;B7ZKK7;P19525-2;P19525;Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes no 0 0 1 1.67 0.471 1 2 58.24 58.25 3;4 1.9176E-05 17804 20230619_1880_Aki_TMTPro18x_K_F1 119.65 102.57 246200 217790 241610 265390 238940 264300 263100 261280 289250 304260 301540 278990 309080 222240 317060 295660 244500 238650 227740 199730 245910 264100 249060 267310 264760 268310 293820 304350 309050 282480 315180 235120 318150 292850 234600 227300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 401330000 4348 1711 4143 8090;8091;8092 6594;6595;6596 6594 3 9606 Homo sapiens 0.09393809691823662 DLKPVLDSYVFNDGSSR Unmodified 1910.9374 0.93740633 4407 Q99816;F5H442;L0L6B6 TSG101 Tumor susceptibility gene 101 protein yes no 0 0 1 7.5 0.5 1 1 60.152 60.198 3 1.4308E-18 17857 20230619_1887_Aki_TMTPro18x_K_F7 185.85 151.9 105430 86134 104920 119420 105630 124650 110900 116960 121620 144080 145800 139700 145890 124050 142930 159040 143010 161540 97481 79124 106720 117890 109870 125430 111920 120730 124370 143980 148430 141530 148730 130350 145500 159350 136960 153340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28563000 4349 4407 4144 8093;8094 6597;6598 6597 2 9606 Homo sapiens 0.01837512138877173 DLLALEQSK Unmodified 1015.555 0.55497548 2163 Q9NWE6;B4DZL5;A8MT40;Q8NCN5 PDPR Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial yes no 0 0 0 4.5 0.5 1 1 55.911 55.947 3 0.0041262 16277 20230619_1885_Aki_TMTPro18x_K_F5 76.815 34.42 31160 27564 28094 28674 34281 37717 35212 33628 37811 33370 36045 32870 39405 32390 34029 42325 41131 43571 28804 25243 28893 28998 35148 37371 35523 34626 38297 33739 37190 33412 39856 33964 35136 42414 39302 41362 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278610000 4350 2163 4145 8095;8096 6599 6599 1 9606 Homo sapiens 0.04782019377819324 DLLAQAR Unmodified 785.43955 0.43955179 1815 A7VJS2;A0A8V8TLK5;P48995-2;P48995 TRPC1 Short transient receptor potential channel 1 yes no 0 0 0 5 0.816 1 1 1 40.116 40.191 2 0.0051171 9573 20230619_1885_Aki_TMTPro18x_K_F5 143.37 0 725320 599460 619860 696680 733230 767210 746990 715940 995310 845640 801230 784510 891160 684130 763250 988010 730720 777970 669920 549640 640570 696550 753360 769550 759750 738470 992090 846260 834880 796140 900080 725140 777870 975580 699790 740980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1224600000 4351 1815 4146 8097;8098;8099 6600;6601 6601 2 9606 Homo sapiens 0.03824960037468372 DLLDDLK Unmodified 830.43855 0.43854874 3416 V9HWE0;P08758;E9PHT9;B4DNG6 HEL-S-7;ANXA5 Annexin;Annexin A5 yes no 0 0 0 4 0 1 59.72 59.722 2 0.0142 18227 20230619_1883_Aki_TMTPro18x_K_F4 117.02 0 81036 59515 67207 99583 149000 214560 127560 133840 207990 173530 164010 219950 238870 212780 128740 298890 265470 335800 74778 54822 70940 98565 148310 206160 132190 143260 205640 174870 173830 220970 236450 224280 141360 300440 253170 318300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137200000 4352 3416 4147 8100 6602 6602 1 9606 Homo sapiens 0.016547008779070893 DLLDLHK Unmodified 852.47052 0.47051757 3256 Q53F51;O43427-2;O43427;H0YCE7;E9PSD3 FIBP Acidic fibroblast growth factor intracellular-binding protein yes no 0 0 0 6 0 1 50.047 50.124 3 0.012864 13948 20230619_1886_Aki_TMTPro18x_K_F6 95.531 34.743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4353 3256 4148 8101 6603 6603 1 9606 Homo sapiens 0.038381133517077615 DLLDLLVEAK Unmodified 1127.6438 0.64379049 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A024R9A4;Q5S4N1;B4E132;A0A0J9YVQ7;A0A087WVZ1 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 6 0.816 1 1 1 65.688 65.725 3 0.00026621 20454 20230619_1885_Aki_TMTPro18x_K_F5 114.86 51.575 103870 88430 97169 107420 99704 106340 113300 112610 121310 123640 117810 123990 121060 101880 124350 148100 128560 125370 96018 81108 99365 106930 103700 107780 113710 114920 123040 124350 121250 125130 123610 108230 126750 146740 122950 119330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 135740000 4354 1018 4149 8102;8103;8104 6604;6605;6606 6604 3 9606 Homo sapiens 0.0850743461746788 DLLDNQSQEEQRR Unmodified 1629.7707 0.77067535 949 A0A0A0MSA7;A0A8I5QJH9;A0A804HJV5;A0A8J9G7U8;A0A8I5KT99;A0A0U1RQK7;Q59GJ0;A0A8I5KV92;O43432-4;O43432;O43432-3;B4DZE1;B4DH17 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes no 0 0 1 1.5 0.5 1 1 36.358 36.387 3 0.031491 8534 20230619_1880_Aki_TMTPro18x_K_F1 53.051 14.417 45979 29919 44668 44604 49556 54459 49686 45250 56532 50069 62258 62147 58502 59060 56049 49948 63800 64740 42451 27534 45556 43948 51097 54095 50304 47012 57398 50742 63444 62423 59773 60515 57429 51199 60975 61330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72072000 4355 949 4150 8105;8106 6607 6607 1 9606 Homo sapiens -0.019019159661411322 DLLEPGCSVLLNHK Unmodified 1593.8185 0.81847717 3706 Q53XL8;Q53HB3;P62191;P62191-2 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 7.5 0.5 1 1 55.091 55.155 3 1.1047E-12 15776 20230619_1887_Aki_TMTPro18x_K_F7 192.4 168.06 138020 112450 111530 137520 123130 143620 144450 137420 153790 140850 121810 114980 141150 107770 129100 159050 125900 127670 127420 103160 115850 136870 127670 144610 144650 140930 154910 141410 127310 117740 142800 114160 131480 157160 120500 121590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1092900000 4356 3706 4151 8107;8108 6608 6608 1 9606 Homo sapiens 0.04532066700357973 DLLEVADVLEK Unmodified 1242.6707 0.67073352 4543 Q9HAV7;B4DWV5 GRPEL1 GrpE protein homolog 1, mitochondrial;GrpE protein homolog yes no 0 0 0 3 0.707 1 2 1 64.013 64.032 2;3 1.5099E-06 20022 20230619_1883_Aki_TMTPro18x_K_F4 135.99 103.73 100550 86339 97938 105720 94495 107160 104210 101380 114890 128440 133710 134420 133290 119010 129790 137840 141790 166010 92985 79193 99701 105190 98717 108120 104880 104720 117260 128520 136300 135650 135920 124300 132760 139760 135710 157290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 436850000 4357 4543 4152 8109;8110;8111;8112 6609;6610;6611 6611 3 9606 Homo sapiens 0.05910498437992828 DLLFQALGR Unmodified 1031.5764 0.57637963 4414 Q9BR63;Q9NSD9;A8K666 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 2 0 1 61.896 61.906 2 0.00015123 19466 20230619_1881_Aki_TMTPro18x_K_F2 147.29 92.881 1291500 1314900 1488500 1407000 1525500 1693500 1598400 1472300 1399800 1198700 1168900 795810 968640 623740 1911600 714460 599360 617850 1197600 1203900 1495800 1417800 1582300 1686100 1601400 1512300 1427700 1214100 1201100 821020 1036900 655090 1848200 715110 586280 587800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 660390000 4358 4414 4153 8113 6612 6612 1 9606 Homo sapiens 0.06185449197187154 DLLGIIK Unmodified 770.49019 0.49019038 4303 Q92665 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 0 0 0 1 0 1 61.567 61.567 2 0.018143 19114 20230619_1880_Aki_TMTPro18x_K_F1 107.66 0 102660 87097 103290 112820 115760 142620 128690 130490 149010 87680 81968 71506 79919 65485 104840 89900 86191 74367 94954 79939 105150 112180 119730 141600 129580 132980 147800 90533 87163 73217 82818 69044 105060 89135 82566 70842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43104000 4359 4303 4154 8114 6613 6613 1 9606 Homo sapiens 0.0957648936247324 DLLGLCEQK Unmodified 1074.5379 0.53794521 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;A0A7I2YQX3;B3KWD0 XPO1 Exportin-1 yes no 0 0 0 5.5 0.5 1 1 55.04 55.111 3 0.00048302 16049 20230619_1886_Aki_TMTPro18x_K_F6 98.249 52.881 48235 37723 44624 44034 37974 47181 43148 47128 53424 58195 49239 54298 67962 54059 44086 78383 68797 70814 44562 34597 45529 44010 40177 47465 43550 48429 53743 58101 51543 55314 67640 57071 46803 77840 65600 67332 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 507710000 4360 3228 4155 8115;8116 6614 6614 1 9606 Homo sapiens 0.0036577550035872264 DLLHCPSK Unmodified 968.47495 0.47495102 1268 A0A1B0GV54;A0A1B0GUS1;L7UQJ2;B7Z5Y6;A0A2R8Y718;B3KMH8;A9UGY9;Q9H1Y0-2;Q9H1Y0 ATG5 Autophagy protein 5 yes no 0 0 0 6.5 0.5 1 1 41.352 41.435 3 0.0062305 9854 20230619_1887_Aki_TMTPro18x_K_F7 78.113 54.141 63058 48833 55191 60295 56171 61790 52742 59850 75814 67997 74783 78800 77402 61585 64201 82480 86375 79584 58228 44813 56753 59971 58242 62331 54127 61489 75873 68622 76893 78930 78282 65204 66838 82331 82382 75645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72658000 4361 1268 4156 8117;8118 6615 6615 1 9606 Homo sapiens -0.010547454970151193 DLLHPSPEEEK Unmodified 1292.6248 0.62484596 3581 P42677 RPS27 40S ribosomal protein S27 yes yes 0 0 0 2.5 1.12 1 1 1 1 43.602 43.651 3 2.4475E-06 11698 20230619_1880_Aki_TMTPro18x_K_F1 150.46 128.31 446620 433830 437850 481320 447470 527410 488060 511560 468680 514630 532050 458910 512630 400950 435520 468530 526800 542470 413390 397390 445970 482900 465250 529500 489400 523690 481330 518060 541510 466620 519920 419460 449440 473770 503260 514400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 783380000 4362 3581 4157 8119;8120;8121;8122 6616;6617;6618 6616 3 9606 Homo sapiens -0.009761467442558569 DLLHSEGSENEGPVSSSSSDCR Unmodified 2347.9823 0.98226062 4626 Q9NY27-2;Q9NY27-3;Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes no 0 0 0 1 0 1 40.713 40.713 3 7.0954E-81 10400 20230619_1880_Aki_TMTPro18x_K_F1 327.31 318.15 17332 15848 12863 17773 13044 17954 18128 16308 15193 19211 18033 21756 20360 18078 19054 19786 20746 25647 16004 14521 13478 17789 13699 18100 17888 16862 15777 19327 18501 21827 20649 18865 19497 20181 19867 24279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65509000 4363 4626 4158 8123 6619 6619 1 9606 Homo sapiens -0.13781121638703553 DLLHSGPGK Unmodified 922.48723 0.48723027 1947 A4FUT8;Q7LBC6;Q7LBC6-2;B4E2P8;Q7LBC6-3 JMJD1B;KDM3B Lysine-specific demethylase 3B yes no 0 0 0 7 0 1 40.793 40.861 3 0.00044551 9616 20230619_1887_Aki_TMTPro18x_K_F7 122.28 99.952 77728 56539 69267 82153 78868 94309 85062 79176 109340 91830 96878 102360 103180 88481 85067 100570 115780 109420 71759 51990 71303 80963 81443 94052 86125 82300 109480 92507 100270 102940 104290 92373 88596 101320 110440 103860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78898000 4364 1947 4159 8124 6620 6620 1 9606 Homo sapiens 0.02288614237670572 DLLLNTMSQEEK Oxidation (M) 1435.6865 0.68645994 3758 P78527;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 3 0.816 1 1 1 51.358 51.416 3 0.0017172 14756 20230619_1882_Aki_TMTPro18x_K_F3 74.987 60.829 236940 201990 231500 268070 218070 255250 265440 259780 281340 301960 288180 279690 318140 254320 305570 348540 314130 299650 219110 185440 235670 265060 228930 259130 265420 266270 286160 302180 296660 284210 323040 268180 311650 345890 300370 285180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153050000 4365 3758 4160 8125;8126;8127 6621;6622 6621 2434 2 9606 Homo sapiens -0.013955831072735236 DLLLNTMSQEEK Unmodified 1419.6915 0.69154532 3758 P78527;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4 0.816 1 1 1 57.991 58.021 3 7.382E-06 17066 20230619_1885_Aki_TMTPro18x_K_F5 138.2 94.392 162480 142760 157620 167010 143340 168430 166640 155210 188010 191170 183470 181580 196580 166060 180860 207760 194040 205220 150280 130870 160380 166710 150750 169930 167350 160500 190220 191000 189030 184260 199470 174030 185070 207890 185610 194900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 451610000 4366 3758 4160 8128;8129;8130 6623;6624;6625 6625 3 9606 Homo sapiens -0.0015127924466469267 DLLLTCAQDR Unmodified 1203.5918 0.59177169 4548 Q9HC35;B5MBZ0;Q9HC35-2 EML4 Echinoderm microtubule-associated protein-like 4 yes no 0 0 0 3.5 0.5 1 1 49.928 49.983 2 0.00013892 14140 20230619_1882_Aki_TMTPro18x_K_F3 141.02 113.4 252860 195250 233900 236320 212060 255060 215350 213980 262080 288990 266380 264300 280390 236020 268010 292400 294630 301050 233580 179140 238840 235540 222380 255550 218510 223470 264760 287300 273720 268430 285140 247450 274360 293340 281690 285830 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 249630000 4367 4548 4161 8131;8132 6626;6627;6628 6627 3 9606 Homo sapiens -0.0018805206796059792 DLLNALK Unmodified 785.4647 0.46470391 1035 A0A0G2JMZ5;P54855;O75795 UGT2B15;UGT2B17 UDP-glucuronosyltransferase 2B15;UDP-glucuronosyltransferase 2B17 yes no 0 0 0 7.5 0.5 1 1 54.556 54.622 2 0.0060433 15493 20230619_1888_Aki_TMTPro18x_K_F8 142.64 0 375410 341380 382200 412580 472840 495390 499530 461130 502090 437530 471610 457810 458100 411460 509480 487620 427090 469520 347430 313020 389270 411890 484320 493950 502040 472910 509980 444190 484850 462450 470460 429850 512530 487900 409720 445990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1501699999.9999998 4368 1035 4162 8133;8134 6629 6629 1 9606 Homo sapiens 0.06339014840034451 DLLNALPNMFTNTR Unmodified 1618.8137 0.81372614 2588 B4E2E1;B4DTM6;O95487-2;O95487;O95487-3 SEC24B Protein transport protein Sec24B yes no 0 0 0 4 0 1 64.018 64.026 3 0.032757 20039 20230619_1883_Aki_TMTPro18x_K_F4 35.711 25.654 8524.4 5653.8 8570.2 8009.1 6642.7 7319.8 9719.9 9033.9 9981.8 8397.4 10894 7668.5 9482.1 9900.8 7999.6 7783 7801.4 10079 7873.3 5199.5 8670.9 7888.6 7132.2 7491.2 9631.4 9095.8 10177 8503.4 11049 7905.4 9661.3 10025 8149.6 7986.3 7482 9540.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10844000 4369 2588 4163 8135 6630 6630 1 9606 Homo sapiens 0.02907182557555643 DLLPHQELR Unmodified 1119.6037 0.60365701 3054 H0YL91;Q15650 TRIP4 Activating signal cointegrator 1 yes no 0 0 0 4 0 1 41.851 41.894 3 0.00064819 10363 20230619_1883_Aki_TMTPro18x_K_F4 107.79 72.964 36161 28399 35025 32756 40108 36510 41925 37979 54867 33611 42787 35526 36199 35326 37131 40007 41627 40405 33420 26042 35730 32792 41266 36694 42545 38591 54590 34311 44130 36020 37240 36674 38005 40145 39776 38377 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15407000 4370 3054 4164 8136 6631 6631 1 9606 Homo sapiens 0.04863932737544019 DLLQADQLGSLK Unmodified 1299.7034 0.70343063 4278 Q8WUM0;B4E206;B4E3T7;A0A024R3R6 NUP133 Nuclear pore complex protein Nup133 yes no 0 0 0 6 0 1 59.754 59.816 3 4.2135E-05 18065 20230619_1886_Aki_TMTPro18x_K_F6 118.76 86.944 53744 43474 49096 51418 51803 54264 51379 48837 62406 57923 57548 47396 55781 45880 51644 59966 56091 55103 49657 39872 50305 51317 53588 54552 52174 50518 62761 57755 59123 48585 56784 48135 52880 59737 53617 52392 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73665000 4371 4278 4165 8137 6632 6632 1 9606 Homo sapiens 0.06556705560819864 DLLQFFKPR Unmodified 1162.6499 0.64987892 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 1 5.5 0.5 1 1 61.656 61.708 3 0.028599 18885 20230619_1886_Aki_TMTPro18x_K_F6 63.184 37.068 71894 65953 79243 85573 69288 103550 77890 76187 108030 110590 103550 102680 111360 97301 104530 114730 91661 124540 66585 60517 79805 85003 73238 102650 78986 80647 108210 109740 106780 104400 113070 101490 105780 115530 88053 118060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123620000 4372 1601 4166 8138;8139 6633 6633 1 9606 Homo sapiens 0.07505997639646012 DLLQQVPNAHK Unmodified 1261.6779 0.67788459 4170;3047 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;H0YHT2;Q68D13;H0YI78 KIF21A;DKFZp779C159 Kinesin-like protein KIF21A no no 0 0 0 8 0 1 46.458 46.506 4 0.00041485 12091 20230619_1888_Aki_TMTPro18x_K_F8 104.52 81.287 35548 33932 38514 41602 32488 40677 30957 30614 33459 32143 35716 41262 38701 30377 35815 40148 43067 48806 32927 31113 38801 41362 34215 40967 31413 32042 34041 32684 36710 41097 39256 32230 36895 40654 41176 46244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109740000 4373 4170;3047 4167 8140 6634 6634 1 9606 Homo sapiens 0.05751275829061342 DLLQSSYNK Unmodified 1066.5295 0.52948901 3623 P51398-2;P51398-3;P51398;V9GYL9;V9GZ03;V9GYJ9;V9GY11;V9GYJ3 DAP3 28S ribosomal protein S29, mitochondrial yes no 0 0 0 7.5 0.5 1 1 49.052 49.129 2;3 1.9389E-07 13154 20230619_1888_Aki_TMTPro18x_K_F8 172.59 112.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4374 3623 4168 8141;8142 6635;6636 6636 2 9606 Homo sapiens -0.0011145514463350992 DLLSTQPSETLASSDSFASTQPTHSWK Unmodified 2920.3727 0.37266061 3322 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 0 0 0 6.5 0.5 1 1 58.218 58.279 4 3.07E-09 17424 20230619_1886_Aki_TMTPro18x_K_F6 116.35 104.15 42564 34330 38716 38030 40488 45343 37935 44382 51256 46810 47234 40929 53934 42192 46547 48618 51876 51223 39325 31466 39666 38218 41888 45282 38835 45440 51310 47014 48895 41889 54460 43853 47766 48895 49578 48626 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132470000 4375 3322 4169 8143;8144 6637 6637 1 9606 Homo sapiens -0.010710818278312217 DLLTPPADKPGQDNR Unmodified 1635.8216 0.82164829 3114 I3VM54;I3VM53;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7 KDM2A Lysine-specific demethylase 2A yes no 0 0 1 5 0 1 45.445 45.523 3 0.03633 11852 20230619_1885_Aki_TMTPro18x_K_F5 55.885 38.085 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4376 3114 4170 8145 6638 6638 1 9606 Homo sapiens 0.029170330786882914 DLLTPVSR Unmodified 899.50763 0.50763136 1260 A0A1B0GVH5;A0A1B0GTC3;B3KU60;Q9C0B1;A0A1B0GUC3;A0A1B0GU26;A0A1B0GTC5;A0A1B0GV98;A0A1B0GTY1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes no 0 0 0 6 0 1 46.633 46.716 2 0.030411 12514 20230619_1886_Aki_TMTPro18x_K_F6 79.713 62.348 93427 79531 97939 93241 97506 109890 98910 95030 127260 96536 112950 97448 104660 87446 106160 111390 141050 127080 86446 72921 99076 93280 101400 109520 100530 98163 127350 97595 116100 98646 107200 91842 109870 112400 134520 120590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59717000 4377 1260 4171 8146 6639 6639 1 9606 Homo sapiens 0.05385784897475787 DLLVQQASQCLSK Unmodified 1488.7606 0.76062794 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 3.67 3.09 1 1 1 56.669 56.677 3 5.3336E-05 16425 20230619_1888_Aki_TMTPro18x_K_F8 111.38 90.679 75032 58659 73967 104750 50462 78304 84852 98127 116910 94211 104090 100570 92590 67125 48085 100710 77710 103400 69353 54069 75097 101560 55428 81510 84577 98787 116640 95604 106780 100700 92691 72174 51623 100640 74244 98088 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 569050000 4378 3957 4172 8147;8148;8149 6640;6641 6641 2 9606 Homo sapiens 0.035798047749267425 DLLVTGAYEISDQSGGAGGLR Unmodified 2078.028 0.02801225 398 A0A024R6I3;Q53GF9;P49755;G3V2K7;B4DL12 TMED10 Transmembrane emp24 domain-containing protein 10 yes no 0 0 0 4 0 1 61.474 61.477 3 0.00016628 18960 20230619_1883_Aki_TMTPro18x_K_F4 72.568 60.877 59710 38835 46072 56196 48984 60109 52972 54147 63810 57261 62019 59442 62776 62204 74701 76924 69348 81483 55037 35726 48045 55342 50857 60315 53520 55820 64302 57802 63765 60395 64672 64823 75474 77310 66487 77300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163130000 4379 398 4173 8150 6642 6642 1 9606 Homo sapiens 0.03211936396519377 DLMPHDLAR Oxidation (M) 1082.5179 0.51787847 3658 P55084-2;P55084;B4DY96;B5MD38;D6W539;C9JEY0;C9JE81;C9K0M0 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 1 0 3 0.816 1 1 1 36.2 36.253 3 6.9716E-05 8047 20230619_1882_Aki_TMTPro18x_K_F3 139.98 99.912 108130 82341 110510 122420 160760 160280 153760 154530 206830 133750 155280 151610 157090 132380 151960 131440 170670 158200 99964 75722 112890 120780 162750 159050 156980 157670 205410 136990 161800 152460 160060 137180 155520 133680 163020 150020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 250770000 4380 3658 4174 8151;8152;8153 6643;6644 6643 2366 2 9606 Homo sapiens -0.02007975439596521 DLMPHDLAR Unmodified 1066.523 0.52296385 3658 P55084-2;P55084;B4DY96;B5MD38;D6W539;C9JEY0;C9JE81;C9K0M0 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 4 0.816 1 1 1 42.589 42.653 3 6.6437E-05 10653 20230619_1883_Aki_TMTPro18x_K_F4 143.03 94.473 65762 61292 74230 84258 108110 116710 102210 108490 133880 94652 103630 107100 109500 98107 104710 101330 112900 120550 60926 56272 75284 83592 109460 115340 104330 110980 133280 96866 108030 107860 111400 101670 107000 102870 108000 114270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 277740000 4381 3658 4174 8154;8155;8156 6645 6645 1 9606 Homo sapiens -0.007636715769876901 DLMTDLK Oxidation (M) 850.41062 0.41061943 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 1 0 4 0 1 46.654 46.697 3 0.080204 12460 20230619_1883_Aki_TMTPro18x_K_F4 40.098 14.648 79887 69038 82097 79545 81451 101720 81047 76240 112500 106560 100110 100120 102270 91799 102890 121610 106390 118760 73912 63286 83195 79765 84791 100580 82717 80460 112360 105940 103400 101670 104380 96529 104910 121500 101840 112780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22157000 4382 1062;1064 4175 8157 6646 6646 626 1 9606 Homo sapiens -0.020569453738289667 DLMTDLK Unmodified 834.4157 0.41570481 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 0 4 0 1 54.188 54.203 2 0.0018039 15891 20230619_1883_Aki_TMTPro18x_K_F4 127.12 52.783 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4383 1062;1064 4175 8158 6647 6647 1 9606 Homo sapiens -0.00812641511208767 DLMVGDEASELR Oxidation (M) 1349.6133 0.613295 3690 P61160;B4DHK9 ACTR2 Actin-related protein 2 yes no 0 1 0 1 0 1 47.81 47.81 2 1.4365E-06 13435 20230619_1880_Aki_TMTPro18x_K_F1 150.22 133.11 61019 48059 53598 62652 77207 73131 64753 55933 74972 71575 75866 64760 79278 66578 63160 85770 68347 70434 56353 44125 55455 62176 77928 72796 66304 58777 75861 71337 77851 66185 80028 69620 64925 84962 65358 67053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142720000 4384 3690 4176 8159 6648 6648 2377 1 9606 Homo sapiens -0.04752711829883083 DLMVGDEASELR Unmodified 1333.6184 0.61838038 3690 P61160;B4DHK9 ACTR2 Actin-related protein 2 yes no 0 0 0 1.5 0.5 1 1 51.728 51.748 2 2.188E-24 15055 20230619_1880_Aki_TMTPro18x_K_F1 320.02 276.21 206650 177360 189650 214850 207120 263560 225020 214060 259750 256440 250550 240260 282780 229820 242350 297960 258580 275110 191010 162660 194530 214470 214590 261600 226890 223250 262390 256490 258820 244400 285600 241050 248360 296880 247360 261480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 309960000 4385 3690 4176 8160;8161 6649;6650 6649 2 9606 Homo sapiens -0.03508407967274252 DLNDRPVGPR Unmodified 1137.5891 0.58906958 4210 Q8IXT5;B9ZVT1 RBM12B RNA-binding protein 12B yes no 0 0 1 4.5 0.5 1 1 33.468 33.537 3 1.5289E-05 6984 20230619_1885_Aki_TMTPro18x_K_F5 150.15 89.18 121180 96071 113760 113380 127290 132030 124810 121470 150570 124420 146640 136220 135560 113170 125540 129060 140770 127170 111970 88115 116370 113350 131070 131890 126800 124910 151670 125990 150070 137010 138220 118340 128690 129340 134450 120860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63531000 4386 4210 4177 8162;8163 6651;6652 6652 2 9606 Homo sapiens 0.02577860589417469 DLNEQFKK Unmodified 1020.524 0.52400971 898 A0A590UJ56;A0A590UJR3;A0A590UJ50;A0A090N7U0;Q13616;A0A590UJ21;B3KTW0;A0A590UJC4;B4DLA3;A0A590UK34;Q75MQ1;B3KU45 CUL1 Cullin-1 yes no 0 0 1 7 0 1 44.122 44.205 3 0.010385 10991 20230619_1887_Aki_TMTPro18x_K_F7 78.556 42.597 191010 157980 171360 194300 261260 264420 228080 235990 306560 229070 251250 202470 223830 183970 241730 216520 199080 158050 176490 144930 177180 194120 263360 261450 234230 242750 305430 231260 258880 206300 230080 192060 242990 213930 190610 150890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133630000 4387 898 4178 8164 6653 6653 1 9606 Homo sapiens 0.0145686606357458 DLNHICVINEHGK Unmodified 1547.7515 0.75146023 4584 Q9NRG1 PRTFDC1 Phosphoribosyltransferase domain-containing protein 1 yes yes 0 0 0 5.5 0.5 1 1 42.369 42.457 4 5.5827E-08 10534 20230619_1886_Aki_TMTPro18x_K_F6 160.65 140.44 341070 236270 273960 296700 249670 301000 320060 275890 377280 409680 472350 370390 423940 373060 351420 429590 503690 487550 314560 216960 283690 294710 263580 303450 320380 287300 384840 405750 477210 378240 430950 387850 367450 433780 480340 462520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1046199999.9999999 4388 4584 4179 8165;8166 6654 6654 1 9606 Homo sapiens -0.0005054379073499149 DLNHVCVISETGK Unmodified 1470.7137 0.71367774 1184 Q6LET3;A0A140VJL3;P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes no 0 0 0 5 0.816 1 1 1 46.149 46.216 3 1.3091E-06 12157 20230619_1885_Aki_TMTPro18x_K_F5 140.82 121.54 471100 393730 452940 402770 400290 411910 426950 399660 447770 531510 554200 616060 628210 508450 583600 645020 621440 649300 435530 360590 460430 406530 420440 415910 429870 412820 459700 532480 567330 617790 636470 535310 596660 646060 594420 616570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1108100000 4389 1184 4180 8167;8168;8169 6655;6656 6655 2 9606 Homo sapiens -0.002850547762363931 DLNLGEMK Oxidation (M) 934.44298 0.44298219 2235 B4DKX4;B2R6E2;Q53EL6-2;Q53EL6;Q5VZS7 PDCD4 Programmed cell death protein 4 yes no 0 1 0 4 0 1 46.298 46.341 2 0.029661 12318 20230619_1883_Aki_TMTPro18x_K_F4 72.607 26.927 57997 51149 56111 69362 94728 99864 88817 75409 102690 68360 90674 93979 86048 77059 88362 86457 99397 112180 53640 46962 57829 68891 95154 98098 90237 78580 103220 70337 93433 93695 88122 80550 90413 88171 95084 106230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93860000 4390 2235 4181 8170 6657 6657 1393 1 9606 Homo sapiens -0.02686157970822478 DLNLGEMK Unmodified 918.44807 0.44806757 2235 B4DKX4;B2R6E2;Q53EL6-2;Q53EL6;Q5VZS7 PDCD4 Programmed cell death protein 4 yes no 0 0 0 4 0 1 52.376 52.4 3 0.0019873 15111 20230619_1883_Aki_TMTPro18x_K_F4 108.81 63.127 33703 32065 40548 37120 49150 57476 53755 54829 60361 41477 47338 52307 50867 43588 53213 55561 58881 61127 31249 29385 40745 37355 50501 56500 54121 55815 60537 42993 49388 52337 51934 45882 54394 55943 56298 57992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29941000 4391 2235 4181 8171 6658 6658 1 9606 Homo sapiens -0.014418541082136471 DLNSDMDSILASLK Oxidation (M) 1536.7341 0.73413841 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 1 0 5 0 1 61.91 61.958 3 0.0014983 18805 20230619_1885_Aki_TMTPro18x_K_F5 72.321 59.341 68910 55720 75397 84297 67196 89490 81997 78415 96453 76080 83112 80227 74776 68614 88187 88532 78726 79042 63765 51240 76005 82798 70960 89770 82264 80846 96822 77189 85550 80906 77250 72170 88922 88123 75418 75174 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24001000 4392 2908 4182 8172 6659 6659 1728 1 9606 Homo sapiens -0.01275928907080015 DLNSDMDSILASLK Unmodified 1520.7392 0.73922379 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 6.5 0.5 1 1 65.134 65.17 3 4.4124E-07 20177 20230619_1887_Aki_TMTPro18x_K_F7 136.83 122.47 46104 36854 47676 47724 61248 58070 66371 63779 53707 53297 60566 48557 57325 49781 68085 70967 66514 61818 42637 33832 48506 47450 62552 58080 66226 64468 55703 54268 61638 49659 59127 52419 68973 70453 63623 58829 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 302960000 4393 2908 4182 8173;8174 6660 6660 1 9606 Homo sapiens -0.00031625044448446715 DLNSQADSLMTSSAFDTSQVK Oxidation (M) 2260.0165 0.016520865 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 1 0 5.5 0.5 1 1 54.784 54.851 3 9.6835E-23 15790 20230619_1885_Aki_TMTPro18x_K_F5 176.1 159.17 31682 24208 26230 31629 32744 33515 36347 32586 34712 38178 37079 40747 42138 33715 36922 46745 42098 49740 29242 22229 27231 31347 33572 33732 36376 33517 35580 38352 38182 41011 42587 35714 37980 46897 40282 47183 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83377000 4394 1022;3868 4183 8175;8176 6661;6662 6661 583 2 9606 Homo sapiens -0.06308673479770732 DLNSQADSLMTSSAFDTSQVK Unmodified 2244.0216 0.021606243 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 5 0 1 60.825 60.875 3 7.0963E-37 18249 20230619_1885_Aki_TMTPro18x_K_F5 223.54 202.53 40277 34601 41551 39276 33375 40537 40985 43356 47200 49965 45788 51809 55059 42630 51965 55303 50632 60894 37264 31715 41970 39323 35548 40961 41100 44267 47711 50183 47500 52182 55721 44978 52844 55670 48528 57741 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167840000 4395 1022;3868 4183 8177 6663 6663 1 9606 Homo sapiens -0.050643696171846386 DLNYCFSGMSDHR Oxidation (M) 1616.6348 0.6347755 1427;1404 P31943;G8JLB6;A0A384MEJ3;E9PCY7;H0YB39;Q68DG4;H0YBD7;H0YBG7;A0A384MDT2;P55795;B4DFK9;B4DP00 HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 1 0 7.5 0.5 1 1 42.553 42.592 3 0.00098887 10308 20230619_1887_Aki_TMTPro18x_K_F7 81.597 80.279 41241 32656 38759 43767 45238 45877 49504 44921 51462 49422 52150 55843 54775 44779 48183 50041 53407 52684 38108 29991 39707 43304 46556 46215 49715 46098 52347 49900 53614 56001 55495 46841 49409 50351 51044 50015 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89276000 4396 1427;1404 4184 8178;8179 6664 6664 874 1 9606 Homo sapiens -0.14887650072842007 DLPAIQPR Unmodified 908.50797 0.50796571 2819 D3DSW3;O94903;E5RG77;A8K520;E5RFZ4 PROSC Proline synthase co-transcribed bacterial homolog protein yes no 0 0 0 5.5 0.5 1 1 44.367 44.453 2 0.0024133 11425 20230619_1886_Aki_TMTPro18x_K_F6 127.12 96.548 196290 162100 194970 212740 210670 225850 211780 204300 244150 238400 267440 263710 261390 224370 233310 282600 274400 280040 181510 148810 198500 210800 217590 226900 214520 211180 247810 239910 272980 265310 265670 235790 240290 282760 262180 265990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193830000 4397 2819 4185 8180;8181 6665 6665 1 9606 Homo sapiens 0.05005204617327763 DLPDEVRER Unmodified 1127.5571 0.55710075 336 Q5H9R7-5;Q5H9R7;Q5H9R7-2;Q5H9R7-6;Q5H9R7-4;E9PKF6;H7BXH2;A0A024R5F3;Q5H9R7-3;E9PQP7;B4DYU6;B4DTT7;B4E0C2;H0YEN2;H0YDW1 PPP6R3;SAPS3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 0 0 1 1 0 1 36.967 36.967 3 0.00028516 8795 20230619_1880_Aki_TMTPro18x_K_F1 124.92 83.928 180890 155840 183760 179570 193570 194760 183890 199680 241210 219400 240620 234580 237090 206470 222880 222920 273520 242260 167350 142860 186510 179690 199970 196000 187840 204130 242420 221180 246700 236500 241500 214780 229660 224860 260990 230010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114140000 4398 336 4186 8182 6666;6667 6667 2 9606 Homo sapiens -0.0015755188437651668 DLPEGAVK Unmodified 827.43888 0.43888309 2863 E1NZA1;Q92616;B4DM32 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 3.5 0.5 1 1 44.567 44.625 2 0.011433 11656 20230619_1882_Aki_TMTPro18x_K_F3 107.29 50.192 114870 79350 109890 112060 131100 156300 141090 132560 161920 147430 153940 147100 165520 146710 120710 132240 189050 180320 106080 72958 112410 111020 134880 154080 142280 137440 163440 148270 158720 149300 166550 150650 127350 135790 180160 170790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58057000 4399 2863 4187 8183;8184 6668;6669 6668 2 9606 Homo sapiens 0.018261205977637474 DLPEHAVLK Unmodified 1020.5604 0.56039521 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 4.5 1.12 1 1 1 1 43.696 43.767 3 0.00049835 11061 20230619_1885_Aki_TMTPro18x_K_F5 112.75 60.753 260840 205190 218900 207880 262610 264840 261700 234990 286630 252910 256730 233270 270050 213260 251480 271230 279630 212540 240810 187940 226410 210610 269210 262980 264610 242630 289390 254160 265260 237150 274240 223710 257680 268330 266810 202740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9957900000 4400 3776 4188 8185;8186;8187;8188 6670 6670 1 9606 Homo sapiens 0.05093742960286818 DLPELALDTPR Unmodified 1238.6507 0.65066678 2235 B4DKX4;B2R6E2;Q53EL6-2;Q53EL6 PDCD4 Programmed cell death protein 4 yes no 0 0 0 3.5 0.5 2 2 57.006 57.025 2;3 5.252E-12 17216 20230619_1882_Aki_TMTPro18x_K_F3 205.73 150.94 143710 130220 129950 154360 177640 213470 192400 182090 214360 172230 181920 204130 183010 179890 205700 214500 220820 260050 132870 119380 134070 154630 181310 210600 193700 187930 215730 175670 188460 204960 188040 188140 209660 217500 211400 246370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 336940000 4401 2235 4189 8189;8190;8191;8192 6671;6672 6671 2 9606 Homo sapiens 0.04088747498030898 DLPEWEPR Unmodified 1040.4927 0.49270958 2448 X6R3R3;B3KYA9;H0YDM2;F2FB34;O94964-4;O94964;O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form yes no 0 0 0 1.33 0.471 2 1 34.225 34.243 3 0.037701 7804 20230619_1880_Aki_TMTPro18x_K_F1 53.166 17.811 138520 108290 127120 124470 143380 148950 142100 133540 202700 152250 180860 168290 179200 150520 147710 158110 193040 161490 127960 99302 130290 124730 147680 148460 145190 138010 202010 153510 186370 169550 181480 156250 153300 158950 184050 153460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 628190000 4402 2448 4190 8193;8194;8195 6673;6674 6674 2 9606 Homo sapiens -0.025917069705201357 DLPFETLEVEAK Unmodified 1389.7028 0.70276193 4631 Q9NYK5-2;Q9NYK5;C9JG87 MRPL39 39S ribosomal protein L39, mitochondrial yes no 0 0 0 3.5 0.5 1 1 62.202 62.22 3 0.0013608 19353 20230619_1882_Aki_TMTPro18x_K_F3 84.479 60.628 134440 119720 131520 138720 124620 151770 149130 144180 162850 158230 149200 164920 158580 136500 172690 170840 151340 165210 124360 109740 133810 138730 130760 152300 149380 148210 164620 159360 154310 166110 162210 143540 174170 170830 145100 156920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 186660000 4403 4631 4191 8196;8197 6675;6676 6675 2 9606 Homo sapiens 0.02349866121176092 DLPFIVSHR Unmodified 1082.5873 0.58727866 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 1 0 1 49.269 49.269 3 1.4933E-06 14026 20230619_1880_Aki_TMTPro18x_K_F1 183.43 120.71 19254 18431 19336 21132 21660 20897 20639 18878 23039 22465 23752 19016 22970 17821 22268 25317 23210 23867 17824 16889 19676 21118 22264 21118 20945 19530 23368 22412 24271 19446 23423 18829 22725 25228 22203 22682 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109030000 4404 1552 4192 8198 6677 6677 1 9606 Homo sapiens 0.049288515714806636 DLPIPLITYDAYPK Unmodified 1617.8654 0.86541058 1386 P15882;P15882-3;A0A2X0SFY7;Q59EM3;P15882-2;A0A494C1M7;A0A494C0C9;C9J3G1;Q6IBE0;F8W6K2;A0A494C1R0;B8ZZ96;C9J3V9;C9JR98 CHN1 N-chimaerin yes no 0 0 0 8 0 1 64.018 64.039 3 7.3247E-05 19565 20230619_1888_Aki_TMTPro18x_K_F8 96.734 79.792 34312 37618 34340 39035 33405 40650 34396 32274 32810 51676 57522 45112 58356 40564 44407 52667 43338 53203 31795 34426 34897 39332 34818 40808 34606 34079 34568 50959 57788 45979 58780 42687 45393 52734 41545 50491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112170000 4405 1386 4193 8199 6678 6678 1 9606 Homo sapiens 0.08119249523133476 DLPLAQGIK Unmodified 953.55458 0.55458155 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GTJ4;A0A1B0GV49 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 7.5 0.5 2 2 53.877 53.946 2;3 2.8053E-05 15294 20230619_1887_Aki_TMTPro18x_K_F7 167.33 91.475 240270 213810 233870 241910 251550 306670 268000 251490 316230 219220 231470 214880 227960 208610 258230 237740 240800 239330 222240 195940 238470 242860 260630 303890 270680 259920 315750 223420 241320 218270 234330 216890 260980 238620 230550 227300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 859560000 4406 1415 4194 8200;8201;8202;8203 6679;6680;6681 6679 3 9606 Homo sapiens 0.07594644448613508 DLPLLLFR Unmodified 985.59605 0.59605244 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;A0A286YFA2;Q9UMY2;Q8N5M8;Q9UMY3;Q96RV7;Q96RV6 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 3.5 1.12 1 1 1 1 64.087 64.11 2 0.00014619 20166 20230619_1882_Aki_TMTPro18x_K_F3 173.93 144.59 1007700 894330 854280 860470 972250 1273800 790860 858840 1081000 497070 624990 720750 378640 511920 1392600 520270 696020 757060 931150 818470 882380 877450 998350 1247100 817080 896340 1064600 529910 654480 714320 443420 534700 1355000 538720 673110 716330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1743499999.9999998 4407 1334 4195 8204;8205;8206;8207 6682;6683 6683 2 9606 Homo sapiens 0.10267825207949954 DLPPLLLK Unmodified 907.57425 0.57425436 4491 Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 yes no 0 0 0 1 0 1 62.095 62.095 2 0.0014715 19322 20230619_1880_Aki_TMTPro18x_K_F1 117.02 82.941 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4408 4491 4196 8208 6684 6684 1 9606 Homo sapiens 0.11677020459376308 DLPSADSVQYR Unmodified 1249.5939 0.59388018 4301 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 0 4 0 1 44.694 44.738 2 8.8541E-23 11614 20230619_1883_Aki_TMTPro18x_K_F4 246.93 201.25 96580 75568 84596 89803 98422 114000 95685 99058 124840 113250 123650 116110 135980 98970 93871 123210 138120 123060 89189 69318 87174 89839 101190 113100 97548 102580 125470 113820 127340 117200 136310 104020 98790 123330 131620 116940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126780000 4409 4301 4197 8209 6685 6685 1 9606 Homo sapiens -0.02093300058481873 DLPSDPER Unmodified 927.42977 0.42977497 3282 O60566-3;O60566 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes no 0 0 0 1 0 1 37.293 37.293 2 0.046805 8922 20230619_1880_Aki_TMTPro18x_K_F1 71.491 44.695 36479 25274 35403 37905 34721 40605 41257 36287 35474 45770 49824 42141 46729 39180 41541 41615 43394 40944 33691 23255 36064 37260 36291 40739 41050 37638 37071 45622 50257 42856 47527 40649 42434 41750 41484 38905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15997000 4410 3282 4198 8210 6686 6686 1 9606 Homo sapiens -0.036842727585622015 DLPSVPPLELSVPADYPAQSPLWIDR Unmodified 2874.4804 0.48036056 4393 Q96RN5;Q96RN5-2;Q96RN5-3;Q6PKB8;B7Z2H7;G3V1P5;B3KW62;B4DGD6;Q69YR4;Q69YK5;Q9NXY2;B3KWF1 MED15;DKFZp686A2214;DKFZp762B1216;FLJ00003 Mediator of RNA polymerase II transcription subunit 15 yes no 0 0 0 7 0 1 65.363 65.39 3 0.076188 20280 20230619_1887_Aki_TMTPro18x_K_F7 35.198 27.206 18146 15688 17666 14764 14862 17482 16778 20045 23104 23551 16937 23943 23709 20304 24598 23136 22518 22241 16781 14356 17926 15045 15732 17538 17012 20377 22960 23620 18020 24131 24027 21212 24873 23162 21563 21135 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17981000 4411 4393 4199 8211 6687 6687 1 9606 Homo sapiens 0.11809959564197925 DLPTSPVDLVINCLDCPENVFLR Unmodified 2685.3142 0.31422321 4346 Q96F86 EDC3 Enhancer of mRNA-decapping protein 3 yes yes 0 0 0 7 0 1 67.193 67.215 3 1.6531999999999998E-26 21016 20230619_1887_Aki_TMTPro18x_K_F7 188.26 172.03 2007.6 1618.2 2804.6 2503.3 1344.5 2708.3 2629.9 1873.6 2166.1 2225 2478.2 3785.7 2770.3 2616.7 2659.1 3184 2394.2 1786.9 1862.3 1488.5 2760.8 2456.9 1552.3 2699.8 2563.3 1985.4 2244.6 2277.3 2550.6 3728.7 2814 2762 2694 3112.2 2289.1 1714.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17690000 4412 4346 4200 8212 6688 6688 1 9606 Homo sapiens 0.0389786679234021 DLPVSEQQER Unmodified 1199.5782 0.57823012 179 Q53GN6;A0A024R201;Q9UNM6;J3KNQ3;B2RBM7;Q9Y6E3;Q9UNM6-2;B4DJ66;H0YD73;E9PL38;Q9UNM7 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 1.5 0.5 1 1 38.398 38.43 2 1.8291E-13 9351 20230619_1880_Aki_TMTPro18x_K_F1 222 168.52 224590 161010 182880 214500 261660 286680 239930 242380 365420 260480 278800 279420 301320 236640 241880 292740 327690 287350 207190 147920 190630 213060 265300 283350 246900 251110 361440 263140 291000 281400 303990 248550 252000 292840 312420 273130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 449490000 4413 179 4201 8213;8214 6689;6690 6689 2 9606 Homo sapiens -0.013575865755228733 DLPVTEAVFSALVTGHAR Unmodified 1881.9949 0.99486163 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 1.5 0.5 1 1 63.396 63.4 3 6.1594000000000004E-24 19889 20230619_1880_Aki_TMTPro18x_K_F1 154.47 121.74 23199 24641 22314 26477 22042 31783 25328 33723 31422 28758 34335 27220 33970 32172 27146 32169 38772 41516 21485 22558 22772 26666 23076 31765 25561 34151 31764 29289 35015 27912 34389 33030 28394 32833 37003 39323 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 519130000 4414 1723 4202 8215;8216 6691;6692 6691 2 9606 Homo sapiens 0.08914399135119311 DLQAHINHR Unmodified 1102.5632 0.56318918 1832 B4DDV7;A0A8V8TMY5;Q75N03-2;Q75N03;C9J2P9 CBLL1 E3 ubiquitin-protein ligase Hakai yes no 0 0 0 6 0 1 28.998 29.029 3 4.9185E-06 5426 20230619_1886_Aki_TMTPro18x_K_F6 189.7 148.67 11616 6775.2 11899 10106 13761 13790 12002 10118 14188 9353.5 11722 11482 12860 11546 12341 10262 14214 13140 10724 6238.5 12078 9978.5 14090 13581 12269 10577 14218 9575.3 12193 11564 13071 11841 12649 10502 13575 12454 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10479000 4415 1832 4203 8217 6693 6693 1 9606 Homo sapiens 0.01601011137813657 DLQANVEHLVQK Unmodified 1392.7361 0.73612775 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;P08237-2;A0A0S2Z4I1;Q96I60;B4E162;Q7KYX9;A0A0S2Z4A8 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 6.5 0.5 1 1 51.975 52.051 3 5.0722E-05 14553 20230619_1887_Aki_TMTPro18x_K_F7 117.63 87.06 351630 312810 335980 318630 302420 321530 374520 285980 394630 399970 444880 416340 450030 386560 449280 449820 525660 486260 325200 286410 341990 321580 318600 324370 373970 297990 402860 398730 454200 421030 459190 403130 461060 453060 501940 461610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2621700000 4416 116 4204 8218;8219 6694;6695 6695 2 9606 Homo sapiens 0.055469126836896976 DLQCHAPVR Unmodified 1094.5291 0.52911186 4563 Q9NPI1;Q9NPI1-2 BRD7 Bromodomain-containing protein 7 yes no 0 0 0 5 0 1 31.567 31.647 3 1.9636E-05 6273 20230619_1885_Aki_TMTPro18x_K_F5 160.59 116.24 25781 20136 24724 24144 27975 28969 28925 27225 40138 29244 26041 26550 25796 25154 27121 32377 33443 26857 23824 18473 25247 24123 28832 28895 29439 27986 39670 29395 27378 27033 26438 26354 27931 32098 31891 25591 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22659000 4417 4563 4205 8220 6696 6696 1 9606 Homo sapiens -0.014371533454777818 DLQDELAGNSEQR Unmodified 1473.6696 0.66956432 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 1 0 1 45.319 45.319 3 8.5114E-11 12406 20230619_1880_Aki_TMTPro18x_K_F1 170.95 120.48 39004 31837 43321 38727 42542 48688 47381 48039 51489 46636 51673 51852 49981 46225 49202 50146 60676 55279 36098 29206 43613 38693 44379 48456 47634 49072 52210 47371 52943 52216 51066 48064 50680 50618 57906 52470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195760000 4418 4191 4206 8221 6697 6697 1 9606 Homo sapiens -0.04832367668882398 DLQEFIPLINQITAK Unmodified 1741.9614 0.96143623 2146 A8KA19;O43592;A0A024RB67 XPOT Exportin-T yes no 0 0 0 2 0 1 65.996 66.003 3 0.00082582 21294 20230619_1881_Aki_TMTPro18x_K_F2 78.069 67.693 6968.5 3476.8 4445 7247.6 5802.9 4261.3 4402.8 5098.7 6143.8 6541.4 4864.7 7274.2 5969.1 5128.1 5695.8 5694.9 7188.2 7510.1 6408.5 3219.7 4757.7 6960.2 5876.1 4555.8 4576.1 5194 6119.8 6552.6 5116.7 7264.4 6047.1 5392.9 5878.7 5815.3 6865.4 7112.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43181000 4419 2146 4207 8222 6698 6698 1 9606 Homo sapiens 0.12013397363239164 DLQEVIELTK Unmodified 1186.6445 0.64451877 3322 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 0 0 0 5 0 1 62.477 62.524 3 0.0027767 19042 20230619_1885_Aki_TMTPro18x_K_F5 88.441 47.852 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4420 3322 4208 8223 6699 6699 1 9606 Homo sapiens 0.058662292665076166 DLQGRDEQSEEK Unmodified 1432.643 0.64301522 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 1 1.5 0.5 1 1 33.899 33.927 3 5.1733E-13 7534 20230619_1880_Aki_TMTPro18x_K_F1 205.86 177.63 82234 41984 110230 86806 160530 136830 119490 153670 126560 92079 148550 150750 130490 107680 155400 60752 152790 130380 76076 38868 110200 84637 161260 134940 123210 154020 129250 98106 150670 148840 134880 110100 156890 66030 146060 123180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97757000 4421 148 4209 8224;8225 6700;6701 6700 2 9606 Homo sapiens -0.05600056560183475 DLQHPNEFIR Unmodified 1267.6309 0.63093439 3646 P53618;E9PP73;E9PP63;E9PKQ1 COPB1 Coatomer subunit beta yes no 0 0 0 4.5 0.5 1 1 42.414 42.477 3 1.1262E-05 10590 20230619_1883_Aki_TMTPro18x_K_F4 139.32 106.99 444650 276420 447080 505710 583110 630910 574500 583740 694030 498870 610780 602130 572750 499860 489080 406250 686870 602800 410560 255140 456400 493030 594700 626980 583320 597300 696200 512230 628730 602890 582080 514250 509180 421100 654700 570760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 587620000 4422 3646 4210 8226;8227 6702;6703 6702 2 9606 Homo sapiens 0.007824162779343169 DLQLVLPDYFPER Unmodified 1603.8246 0.8246084 1186 B3KY04;A0A140VJM4;Q96CX2 KCTD12 BTB/POZ domain-containing protein KCTD12 yes no 0 0 0 6 0 1 63.787 63.833 3 3.6436E-08 19838 20230619_1886_Aki_TMTPro18x_K_F6 113.8 93.417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4423 1186 4211 8228 6704 6704 1 9606 Homo sapiens 0.0468490820351235 DLQMVNISLR Unmodified 1187.6332 0.63324258 4405 Q99623;F5GY37;Q99623-2;J3KPX7;F5GWA7;B4DW05;A0A976LZI3;A0A7I2V5F0 PHB2 Prohibitin-2 yes no 0 0 0 4.5 3.5 1 1 57.228 57.254 2 1.1989E-06 17355 20230619_1880_Aki_TMTPro18x_K_F1 198.25 130.03 1082300 986380 1111700 1098300 1145600 1596700 1450100 1253600 1427700 1189000 1093100 1046100 1178900 1109200 1492500 1128500 1198300 1201300 1001700 903740 1128000 1106600 1197500 1568100 1442900 1302800 1442000 1201700 1141800 1070700 1216000 1143000 1493800 1139200 1149400 1140200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1302300000 4424 4405 4212 8229;8230 6705;6706 6705 2 9606 Homo sapiens 0.046931286914059456 DLQMVNISLR Oxidation (M) 1203.6282 0.6281572 4405 Q99623;F5GY37;Q99623-2;J3KPX7;F5GWA7;B4DW05;A0A976LZI3;A0A7I2V5F0 PHB2 Prohibitin-2 yes no 0 1 0 7.5 0.5 1 1 51.37 51.447 2 0.0014731 14097 20230619_1888_Aki_TMTPro18x_K_F8 99.568 61.265 267470 228070 232470 285640 346080 321690 342010 339940 375630 276680 295890 276430 292340 250020 322700 287670 276140 303370 247120 209250 241060 284160 349970 323110 345940 344310 377330 283150 307180 279900 299900 260800 324860 289490 264850 287880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 617590000 4425 4405 4212 8231;8232 6707;6708 6708 2764 2 9606 Homo sapiens 0.03448824828774377 DLQNVNITLR Unmodified 1184.6513 0.65133548 2035 Q6FHP5;A8K401;P35232;Q6PUJ7;Q53FV0;C9JW96;E7ESE2;E9PCW0;P35232-2;A8K9G2;A0A8I5KWR0 PHB;HEL-S-54e Prohibitin yes no 0 0 0 7.5 0.5 1 1 51.145 51.223 2 2.4467E-09 14032 20230619_1888_Aki_TMTPro18x_K_F8 198.25 159.29 1299400 1150100 1233800 1361900 1399800 1536500 1584400 1516600 1753700 1610400 1646300 1651300 1923600 1509700 1645500 1703000 1633900 1821000 1201600 1054500 1262300 1360400 1445900 1540200 1591600 1553400 1772800 1624100 1706300 1669700 1940200 1573100 1677800 1714800 1564700 1727600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6740599999.999999 4426 2035 4213 8233;8234 6709;6710 6710 2 9606 Homo sapiens 0.06639586937740205 DLQPFPTCQALVYR Unmodified 1706.845 0.84502627 2320 B2RDN4;Q14137;A8K3R2;B4DEN9;Q14137-2;Q4G0D9;Q6DKJ9 BOP1 Ribosome biogenesis protein BOP1 yes no 0 0 0 2 0 1 58.826 58.84 3 0.020552 18141 20230619_1881_Aki_TMTPro18x_K_F2 58.32 34.469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4427 2320 4214 8235 6711 6711 1 9606 Homo sapiens 0.01987755591653695 DLQQYQSQAK Unmodified 1207.5833 0.5833155 3304 O75396;I1VE16 SEC22B Vesicle-trafficking protein SEC22b yes no 0 0 0 6 0 1 42.737 42.831 2 1.4746E-45 10694 20230619_1886_Aki_TMTPro18x_K_F6 319.19 237.89 88170 51588 83732 81441 93411 111180 107120 96846 128880 105770 117440 121440 124280 104050 111310 100190 135630 123430 81350 47534 85584 80146 96725 109770 107840 100170 129530 106960 121350 121920 126020 107740 114680 102090 129450 117030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108620000 4428 3304 4215 8236 6712 6712 1 9606 Homo sapiens -0.012172827129006691 DLQSAEKEEQEK Unmodified 1432.6682 0.66816734 670 A0A994J7L5;J3KQA0;A0A024RBE9;P21579;A0A994J5A7;A0A994J4M1 SYT1 Synaptotagmin-1 yes no 0 0 1 2.5 0.5 1 1 41.209 41.277 3 1.7202E-05 10407 20230619_1881_Aki_TMTPro18x_K_F2 124.07 57.805 41025 30267 39233 61963 59489 55934 61677 55499 55522 54093 60950 45576 45265 36536 62588 26046 42225 24917 37898 27964 40446 59796 60140 56981 61839 56728 57114 54474 61529 46339 47468 37447 62005 26418 40477 23741 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55609000 4429 670 4216 8237;8238 6713 6713 1 9606 Homo sapiens -0.030860017576287646 DLRDDRDR Unmodified 1059.5057 0.50573388 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 2 1 0 1 23.162 23.162 3 0.03425 3807 20230619_1880_Aki_TMTPro18x_K_F1 65.404 27.677 41955 22132 49946 55199 72818 65464 60867 62425 58099 48582 69308 66704 56052 51522 58852 27925 74780 63092 38770 20556 50431 53090 73345 65318 61995 63618 59743 50389 69996 66333 57791 52427 60492 30519 71314 59595 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68666000 4430 3152 4217 8239 6714 6714 1 9606 Homo sapiens -0.021638758584231255 DLRPGDTVTITCSSYR Unmodified 1839.8785 0.87851124 1006 A0A0C4DGH0;B4DK26;A8K6Q6;Q5ZPR3;H0YL10;A8K9J6;Q5ZPR3-2;Q5ZPR3-3;Q5ZPR3-4;H0YN29 CD276 CD276 antigen yes no 0 0 1 7 0 1 44.752 44.838 3 6.5968E-43 11232 20230619_1887_Aki_TMTPro18x_K_F7 285.19 264.13 163740 116330 139160 171610 170430 211360 180710 188020 252470 206700 217420 257130 251200 230700 240010 260880 277010 295200 151090 107000 144110 169160 175200 210040 183770 194180 251640 209570 226490 257770 254960 240380 246420 263540 264810 279950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 523490000 4431 1006 4218 8240 6715 6715 1 9606 Homo sapiens -0.007832874270661705 DLRPVDNR Unmodified 983.51484 0.514842 3579 P42285;A8K6I4;B4E3M6 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 0 1 4 0.816 1 1 1 31.467 31.543 3 0.0015129 6104 20230619_1883_Aki_TMTPro18x_K_F4 117.89 88.417 155550 102360 138060 142040 188180 173260 158170 173780 203980 166380 170070 177180 193710 152710 157700 165250 204480 173500 143520 94116 142420 140580 190540 172890 162650 177220 203840 168930 177140 178510 195210 159060 163590 166330 194980 164810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 193950000 4432 3579 4219 8241;8242;8243 6716;6717;6718 6717 3 9606 Homo sapiens 0.02242517497904828 DLSAAGIGLLAAATQSLSMPASLGR Oxidation (M) 2386.2526 0.25260923 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991;D6RB45;A0A1B0GX04;D6R8Z5;D6REK4;D6RCM3;D6RBS2;D6R9F3 MATR3;DKFZp686K23100 Matrin-3 yes no 0 1 0 5.5 0.5 1 1 66.385 66.428 3 1.5265E-63 20890 20230619_1886_Aki_TMTPro18x_K_F6 267.54 239.58 17918 13234 17018 20362 22933 19301 19892 19081 19474 18396 23068 20412 22489 16094 20789 19758 17691 20340 16551 12177 17462 19951 23221 19602 20223 19501 20004 18687 23456 20498 22860 16951 20995 19834 16975 19303 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 307230000 4433 1059 4220 8244;8245 6719;6720 6720 619 2 9606 Homo sapiens 0.11493303155384638 DLSAAGIGLLAAATQSLSMPASLGR Unmodified 2370.2577 0.25769461 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991;D6RB45;A0A1B0GX04;D6R8Z5;D6REK4;D6RCM3;D6RBS2;D6R9F3 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 0 6 0.816 1 1 1 67.157 67.193 3 1.2507E-103 21200 20230619_1886_Aki_TMTPro18x_K_F6 342.19 327.27 15957 14474 16382 17848 15289 16381 20039 21700 18480 18626 21436 19486 22122 19489 18867 19883 21112 20233 14768 13274 16601 17735 16080 16798 19890 21715 19028 19006 21871 19756 22405 20122 19371 19995 20172 19217 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 324720000 4434 1059 4220 8246;8247;8248 6721;6722;6723;6724 6723 4 9606 Homo sapiens 0.1273760701797073 DLSDTVR Unmodified 804.39775 0.39774656 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 2 0 1 37.489 37.549 2 1.45E-05 8683 20230619_1881_Aki_TMTPro18x_K_F2 195.85 62.89 125130 70274 124320 131200 152960 149770 122940 134050 163070 143300 161080 169860 176420 142600 132980 92783 183670 161200 115470 64917 126780 127620 155740 149630 127000 138270 163780 145190 166020 170100 177480 145500 138530 98031 175090 152470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185940000 4435 2297 4221 8249 6725 6725 1 9606 Homo sapiens -0.012276404416979858 DLSEVSETTESTDVK Unmodified 1638.7472 0.74720552 3575 P41227-2;P41227 NAA10 N-alpha-acetyltransferase 10 yes no 0 0 0 1.5 0.5 1 1 49.599 49.628 3 3.492E-14 14172 20230619_1880_Aki_TMTPro18x_K_F1 182.57 167.97 83295 59041 65855 76475 73390 101750 79721 81852 115100 100960 99824 112960 123560 97417 82537 140500 131680 122250 76823 54228 68552 76093 76083 100450 81087 85489 114640 101430 104200 113630 123420 103270 87679 139300 125450 116340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 473320000 4436 3575 4222 8250;8251 6726 6726 1 9606 Homo sapiens -0.04661819314014792 DLSHIGDAVVISCAK Unmodified 1583.7977 0.79774172 3437 Q6FHF5;P12004;Q6FI35 PCNA Proliferating cell nuclear antigen yes no 0 0 0 6.5 0.5 1 1 53.971 54.043 3 1.9339E-10 15449 20230619_1887_Aki_TMTPro18x_K_F7 146 103.45 90999 82323 89896 88040 69225 98867 90642 79914 92643 102570 107420 79653 110990 82702 85336 111310 95662 96041 84192 75401 91116 88617 74280 98702 90243 83584 94886 101770 109460 82132 111850 86781 87944 110460 91431 91381 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5993799999.999999 4437 3437 4223 8252;8253 6727 6727 1 9606 Homo sapiens 0.029194763206987773 DLSILSYLSQLQPPMPK Unmodified 1929.0281 0.028135591 4056 Q5SY16 NOL9 Polynucleotide 5'-hydroxyl-kinase NOL9 yes yes 0 0 0 5 0 1 66.558 66.6 3 3.6956E-06 20805 20230619_1885_Aki_TMTPro18x_K_F5 100.4 90.439 7016.6 5624.3 6721.1 7163.7 5775.2 5633.2 7437.3 6897.4 7668.1 8480.9 7630.7 8487 8879.6 7404.1 8287.2 9597.8 11575 10200 6485 5162.3 6839.9 7089.9 6111.5 5844.3 7410.3 7005.2 7803.9 8483.1 7893 8576.6 8998.5 7791.5 8625 9638.8 11033 9686.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8026800 4438 4056 4224 8254 6728 6728 1 9606 Homo sapiens 0.1007826486279555 DLSLDDFK Unmodified 951.45493 0.45492709 1441 A0A384MTR2;P30048-2;P30048;Q53HC2;A4UCS5 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes no 0 0 0 4.5 0.5 1 1 58.69 58.719 2 0.00094009 17774 20230619_1883_Aki_TMTPro18x_K_F4 152.63 91.842 970170 880240 914150 1020000 1044400 1201700 1141200 1199000 1219600 1218900 1200800 1155200 1157200 1057700 1157000 1658000 667820 1340300 897270 806810 936050 1021200 1077500 1201300 1147600 1225200 1237500 1228800 1230900 1173700 1182200 1125300 1152700 1637100 648350 1274000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1185400000 4439 1441 4225 8255;8256 6729;6730 6729 2 9606 Homo sapiens -0.022742179559941178 DLSLEEIQK Unmodified 1073.5605 0.56045479 2660;2878 B5BU83;P16949;A2A2D0;A0A140VJW2;P16949-2;Q59G27;E5RGX5;Q93045;B7Z4N6;Q93045-2;B7Z4K3 STMN1;STMN2 Stathmin;Stathmin-2 no no 0 0 0 3.5 1.71 2 2 2 2 2 2 53.955 53.995 2;3 2.845E-06 16163 20230619_1881_Aki_TMTPro18x_K_F2 173.48 93.31 2034900 1676600 1765700 1933000 1756300 1946100 1885900 1808800 2167500 2300500 2492800 2389400 2109800 1945000 1495600 2831300 1769000 2445400 1879600 1537200 1816800 1931500 1829600 1964300 1903200 1871100 2205400 2301000 2523500 2407900 2137100 2066400 1554700 2805100 1694600 2324300 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 28482000000 4440 2660;2878 4226 8257;8258;8259;8260;8261;8262;8263;8264;8265;8266;8267;8268 6731;6732;6733;6734;6735;6736 6732 6 9606 Homo sapiens 0.02661698169617921 DLSLEEIQKK Unmodified 1201.6554 0.65541781 2660;2878 B5BU83;P16949;A2A2D0;A0A140VJW2;P16949-2;Q59G27;E5RGX5;Q93045;B7Z4N6;Q93045-2;B7Z4K3 STMN1;STMN2 Stathmin;Stathmin-2 no no 0 0 1 5.5 0.5 1 1 50.398 50.475 3 0.00017657 13955 20230619_1885_Aki_TMTPro18x_K_F5 121.08 79.075 140300 127210 134060 144270 136790 123350 136440 140790 135420 153190 181620 134240 139200 136840 226510 130880 151370 119360 129770 116580 136760 144080 141630 126840 137670 142980 139870 153530 182170 137350 147580 140670 224110 131330 145340 113600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203170000 4441 2660;2878 4227 8269;8270 6737 6737 1 9606 Homo sapiens 0.06265631640781066 DLSLGGVLLFPVDDK Unmodified 1586.8556 0.85557418 951 Q86WJ1;Q86WJ1-2;Q86WJ1-4;X5D2E5;A0A494C1F7;A0A0A0MSH9;A0A494C1P7;Q9H678;A0A0A0MRH8;B4DLS6;A0A494C179;Q86WJ1-5;Q86WJ1-3 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes no 0 0 0 6.5 0.5 1 1 65.159 65.195 3 1.8787E-05 20187 20230619_1887_Aki_TMTPro18x_K_F7 106.14 91.167 27284 23920 25866 25944 22038 33081 31233 33881 31240 30540 31148 34987 32922 34350 33716 33292 33596 42957 25229 21914 26352 26143 23505 32908 30969 34452 31819 31178 32078 35285 33624 35384 34265 34016 32210 40664 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68332000 4442 951 4228 8271;8272 6738 6738 1 9606 Homo sapiens 0.0856206151772767 DLSLLSHGGR Unmodified 1053.5567 0.55670682 1489 A0A384P5L2;Q08257;A6NP24;Q08257-2 CRYZ Quinone oxidoreductase yes no 0 0 0 7.5 0.5 1 1 43.159 43.203 3 1.4883999999999998E-19 10584 20230619_1887_Aki_TMTPro18x_K_F7 205.59 142.3 55566 45316 53721 65391 78424 81076 80834 80217 82805 59902 68811 70739 62759 58745 64080 66757 75048 78989 51366 41648 55177 64557 79511 80755 81386 81461 83609 61984 71024 70935 64364 61404 65759 67633 71726 74880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 96577000 4443 1489 4229 8273;8274 6739;6740 6739 2 9606 Homo sapiens 0.03207073186422349 DLSLPPVDR Unmodified 1010.5397 0.53965977 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B3KU93;A0A8V8TQ95;B7Z1H4;B7Z1V9;B3KTP2;H0YCQ5 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 4 0 1 49.181 49.219 2 0.0027127 13603 20230619_1883_Aki_TMTPro18x_K_F4 103.87 103.87 105700 85601 106890 111740 96790 128490 109760 114440 131600 131620 133330 132130 144510 121930 120860 148050 161290 162650 97744 78586 108390 110900 101880 128260 110640 118320 132940 132130 137170 133790 146050 127530 125690 149080 153940 154320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74961000 4444 2933 4230 8275 6741 6741 1 9606 Homo sapiens 0.034811525806162535 DLSLYLQHIR Unmodified 1256.6877 0.68772099 1262 B3KY33;A0A1C7CYY6;A0A1B0GTX1;Q6XZF7-2;Q6XZF7;A0A2X0U4N6 DNMBP Dynamin-binding protein yes no 0 0 0 2 0 1 54.555 54.579 3 0.019428 16410 20230619_1881_Aki_TMTPro18x_K_F2 63.734 39.102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4445 1262 4231 8276 6742 6742 1 9606 Homo sapiens 0.06964463834469825 DLSMSEEDQMMR 3 Oxidation (M) 1518.5636 0.56364397 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;Q5H962;B4DGF6 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 3 0 1 0 1 34.378 34.378 3 0.038355 7731 20230619_1880_Aki_TMTPro18x_K_F1 47.352 43.25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4446 594 4232 8277 6743 6743 342;343;344 1 9606 Homo sapiens -0.17489530892498806 DLSQLQENLK Unmodified 1186.6194 0.61936665 4208 Q8IX12-2;Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 0 0 0 6 0 1 54.477 54.554 3 3.4698E-07 15828 20230619_1886_Aki_TMTPro18x_K_F6 144.55 97.248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4447 4208 4233 8278 6744 6744 1 9606 Homo sapiens 0.03352174463952906 DLSQQIR Unmodified 858.45593 0.45593014 3440 P12270;P12270-2;Q58F23;Q504U6;A0PJC9 TPR Nucleoprotein TPR yes no 0 0 0 4 0.816 1 1 1 38.082 38.145 2 0.0062045 8751 20230619_1885_Aki_TMTPro18x_K_F5 134.85 66.539 116600 84432 99082 121790 135600 149270 131220 124170 158830 125770 146170 146730 150110 122760 131140 124000 161790 140770 107610 77634 102800 120190 137920 148240 133360 128660 159640 127740 150720 147160 152170 127520 135320 125570 154360 133610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218250000 4448 3440 4234 8279;8280;8281 6745 6745 1 9606 Homo sapiens 0.02104041203574525 DLSSEELAAFQK Unmodified 1336.6511 0.65106071 4721 Q9Y3B7;Q53G19;Q9Y3B7-2 MRPL11 39S ribosomal protein L11, mitochondrial yes no 0 0 0 4 0.816 1 1 1 57.873 57.904 3 1.4108E-05 17400 20230619_1883_Aki_TMTPro18x_K_F4 107.06 82.202 167160 152580 155690 172460 170680 195090 194080 195330 222550 205360 203200 193550 221820 175810 203070 211350 210910 212090 154590 139810 159470 172870 176830 195580 195190 199770 224340 206680 210150 196470 224830 183900 207300 211850 201730 201430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 183290000 4449 4721 4235 8282;8283;8284 6746;6747 6747 2 9606 Homo sapiens -0.003798775727773318 DLSSPSQYDTGVALTGLSCFVTPDLAR Unmodified 2869.3804 0.38038852 1855 A0A8V8TQW4;O14617-4;O14617;O14617-5;O14617-2;Q6PK82;A0A2R8Y4J3 AP3D1 AP-3 complex subunit delta-1 yes no 0 0 0 7.5 0.5 1 1 64.679 64.702 3 2.6129E-20 19838 20230619_1888_Aki_TMTPro18x_K_F8 146.34 138.5 19780 14590 18055 17734 12559 17279 19590 18719 20912 20694 21003 20972 20574 18999 21179 23387 22095 25475 18266 13389 18405 17653 13698 17533 19390 19081 21228 20815 21531 21215 21051 19893 21590 23541 21155 24162 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78946000 4450 1855 4236 8285;8286 6748;6749 6749 2 9606 Homo sapiens 0.020473541680985363 DLSSSEPVHAK Unmodified 1168.5724 0.57241646 2129 Q8WTT2;A8K905 NOC3L Nucleolar complex protein 3 homolog yes no 0 0 0 3.5 0.5 1 1 37.954 38.002 3 0.00068266 8717 20230619_1883_Aki_TMTPro18x_K_F4 82.494 46.161 57597 38030 50073 58256 64263 61175 58840 64363 72565 62370 73186 77175 76446 62366 62454 61433 76737 77593 53136 35008 51739 57181 65444 61711 60079 65473 73148 63595 75211 77144 77241 64800 64533 62664 73289 73524 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103840000 4451 2129 4237 8287;8288 6750 6750 1 9606 Homo sapiens -0.005126850871874922 DLSSVQTLLTK Unmodified 1203.6711 0.67106787 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q14917;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 61.657 61.662 3 0.00010432 19162 20230619_1880_Aki_TMTPro18x_K_F1 119.45 87.289 24709 21098 27251 28049 25163 29596 27737 26877 34096 34344 34728 36740 37572 29878 31956 39355 32341 39806 22873 19369 27446 27771 26387 29742 28022 27852 34411 34383 35734 36952 37971 31557 32660 39398 30991 37776 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137220000 4452 1022;3868 4238 8289;8290 6751 6751 1 9606 Homo sapiens 0.07737918157863533 DLSTIEPLK Unmodified 1014.5597 0.55972651 1493 A0A384P5U2;P39687;H0YN26;Q6PKH8;Q08AJ6;Q3KPI8;O95626;O43423 ANP32A;ANP32D;ANP32C Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member D;Acidic leucine-rich nuclear phosphoprotein 32 family member C yes no 0 0 0 4.5 1.12 1 1 1 1 54.919 54.971 3 0.00027464 15977 20230619_1886_Aki_TMTPro18x_K_F6 120.15 0 679840 518480 549070 602190 609690 648250 678470 646660 774390 736540 783200 751710 819060 631710 666980 873820 778230 820040 627360 475540 569870 602000 630550 652180 682970 663230 783790 740050 804340 758760 827200 668610 688220 870560 743820 779290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1592399999.9999998 4453 1493 4239 8291;8292;8293;8294 6752;6753;6754;6755 6755 4 9606 Homo sapiens 0.05302903520578184 DLSTPGLEK Unmodified 958.49713 0.49712625 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 4.33 0.471 2 1 47.905 47.964 2;3 0.00075791 13025 20230619_1883_Aki_TMTPro18x_K_F4 91.867 45.87 54128 41962 49891 55584 57592 54930 61819 55503 58097 66587 72845 69966 78308 66500 68532 65839 75716 79928 50002 38536 51177 54998 59242 55630 61970 56986 60027 66790 74268 70751 79275 68704 70240 66976 72404 75751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 868530000 4454 630 4240 8295;8296;8297 6756;6757 6756 2 9606 Homo sapiens 0.01621757452392103 DLSTVEALQNLK Unmodified 1329.714 0.71399532 3989 Q53F20;Q9BTT0;E9PPH5;Q9BTT0-3 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes no 0 0 0 6.5 0.5 1 1 61.55 61.597 3 0.00010046 18511 20230619_1887_Aki_TMTPro18x_K_F7 88.338 62.326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4455 3989 4241 8298;8299 6758;6759 6759 2 9606 Homo sapiens 0.06232688215300186 DLSYCLSGMYDHR Oxidation (M) 1631.6708 0.67082665 470 A0A024R7T3;P52597;B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 1 0 4.5 0.5 1 1 45.54 45.6 3 0.0035512 11995 20230619_1883_Aki_TMTPro18x_K_F4 70.628 55.362 164190 152230 183110 197910 188520 246150 230820 224680 262460 253820 253010 282840 252650 219620 228940 280670 306110 264640 152100 139680 184700 196700 196780 244620 231220 231780 265210 255840 260210 283580 256880 231780 237740 280030 291850 251680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 310890000 4456 470 4242 8300;8301 6760;6761 6760 285 2 9606 Homo sapiens -0.11974192895968372 DLSYCLSGMYDHR Unmodified 1615.6759 0.67591203 470 A0A024R7T3;P52597;B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 0 0 6 0.816 1 1 1 51.009 51.086 3 1.2615E-15 14374 20230619_1886_Aki_TMTPro18x_K_F6 202.29 192.34 139870 131620 142540 120850 137460 169570 158450 143530 202310 115040 105750 110030 148150 106560 128280 118280 122600 122410 129470 120390 144400 123710 143950 167210 159810 147670 199550 117860 114940 111820 148820 110770 130410 118950 117360 116220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 661880000 4457 470 4242 8302;8303;8304 6762;6763 6763 2 9606 Homo sapiens -0.10729889033359541 DLTALCK Unmodified 819.41604 0.41603916 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5KV76;A0A8I5KRF4;A0A8I5KSH0;A0A8I5KVZ4;A0A8I5KQU6;A0A8I5KRC9;A0A8I5KTR5;A0A8I5KPV0 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 0 7 0 1 49.446 49.53 2 0.01504 13347 20230619_1887_Aki_TMTPro18x_K_F7 117.93 41.087 214700 166500 186950 201700 236970 234240 232070 225690 289790 224590 251910 226530 248640 217230 238450 261130 293290 249330 198250 152760 193030 201240 241990 234280 235990 231120 290240 227270 259930 229760 253510 226670 245780 261000 279790 237100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70156000 4458 1785 4243 8305 6764 6764 1 9606 Homo sapiens -0.000892217913587956 DLTDYLMK Unmodified 997.47903 0.47903335 3112;3679;2695;4827 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;A6NL76;B3KW67;A0A804HKV3;Q13707;P63267-2;B4DUI8;K4ENJ5;K4EP00;K4EQ44;P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;I3L3I0;I3L1U9;Q562R1;A0A2R8YEA7;A0AUL6;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;B3KUD3;V9HVZ7 ACTA1;ACTC1;ACTA2;ACTG2;ACTG1;ACTBL2;ACTB;PS1TP5BP1;HEL-176 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 0 0 5.09 1.93 1 1 2 2 2 2 1 61.118 61.15 2;3 0.0001589 18391 20230619_1885_Aki_TMTPro18x_K_F5 172.15 84.117 3091600 2414100 2855800 3147200 3126100 4144100 3593600 3697500 4416700 4107800 3614400 3514200 4550700 3477100 3658100 4000700 3669200 3907300 2856100 2216600 2927700 3130300 3245400 4102100 3620900 3817500 4422500 4113000 3785900 3593000 4569500 3618300 3738000 4006000 3512200 3711300 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 56857000000 4459 2695;3112;3679;4827 4244 8306;8307;8308;8309;8310;8311;8312;8313;8314;8315;8316 6765;6766;6767;6768;6769;6770 6767 6 9606 Homo sapiens -0.0198070079397894 DLTDYLMK Oxidation (M) 1013.4739 0.47394797 3112;3679;2695;4827 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;A6NL76;B3KW67;A0A804HKV3;Q13707;P63267-2;B4DUI8;K4ENJ5;K4EP00;K4EQ44;P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;I3L3I0;I3L1U9;Q562R1;A0A2R8YEA7;A0AUL6;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;B3KUD3;V9HVZ7 ACTA1;ACTC1;ACTA2;ACTG2;ACTG1;ACTBL2;ACTB;PS1TP5BP1;HEL-176 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 1 0 5.9 1.76 1 1 2 2 5 6 3 58.076 58.126 2;3 0.00059154 17372 20230619_1880_Aki_TMTPro18x_K_F1 112.17 45.139 2142800 1723000 1851400 2300200 2777700 2817600 2593800 2575100 2970900 2617500 2573100 2321900 2912000 2240000 2284200 2664500 2335700 2525000 1978900 1582300 1921500 2281100 2806000 2804500 2636500 2648100 2989800 2635200 2671300 2368900 2929600 2337100 2338800 2662100 2235600 2399100 11 11 11 11 11 11 11 11 11 11 11 11 11 11 11 11 11 11 22046000000 4460 2695;3112;3679;4827 4244 8317;8318;8319;8320;8321;8322;8323;8324;8325;8326;8327;8328;8329;8330;8331;8332;8333;8334;8335;8336 6771;6772;6773;6774;6775;6776;6777;6778;6779;6780;6781;6782 6771 1614 12 9606 Homo sapiens -0.03225004656587771 DLTEYLK Unmodified 880.4542 0.45419881 3001;4592 G1UI16;Q29RF7;Q29RF7-3;Q9NTI5-2;Q9NTI5;B7Z5S1;Q9NTI5-3 PDS5A;PDS5B Sister chromatid cohesion protein PDS5 homolog A;Sister chromatid cohesion protein PDS5 homolog B no no 0 0 0 6 0 1 56.554 56.628 2 0.023748 16687 20230619_1886_Aki_TMTPro18x_K_F6 103.92 21.96 149940 134540 141960 143520 151650 175050 166440 170020 199310 191670 185540 173780 193300 166620 171750 221180 199860 202680 138670 123230 145040 144690 157270 174540 167980 174550 200670 192040 191260 177090 196060 174980 176860 220200 190970 192690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73747000 4461 3001;4592 4245 8337 6783 6783 1 9606 Homo sapiens 0.009189873949594585 DLTEYLSR Unmodified 995.49238 0.49237523 756;3227 A0A087WUK2;A0A024RDB5;O14979;B4DTA2;O14979-2;O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 4.5 1.12 1 1 1 1 52.956 53.006 2 0.00079683 15321 20230619_1883_Aki_TMTPro18x_K_F4 155.88 112.06 1063500 844310 849220 1036800 991720 1151300 1134800 1157300 1429800 1275800 1187600 1117200 1366200 1073700 1079100 1414800 1237200 1252400 981600 774680 883950 1032600 1024100 1155500 1144600 1184800 1430200 1278700 1236900 1140400 1374600 1127400 1113000 1406200 1182300 1191200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2293800000 4462 756;3227 4246 8338;8339;8340;8341 6784;6785;6786 6784 3 9606 Homo sapiens -0.005551266903694341 DLTGQVPTPVVK Unmodified 1252.7027 0.70270235 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 7.5 0.5 1 1 52.744 52.817 2 8.3019E-06 14837 20230619_1887_Aki_TMTPro18x_K_F7 143.79 114.7 132600 100760 105870 124430 97099 116550 130590 119610 131550 149810 154200 153180 149070 120830 137350 164530 152760 167030 122360 92469 109780 123610 102560 118520 129750 122850 134910 149830 156920 154260 151710 128050 140880 164690 146110 158570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 374100000 4463 630 4247 8342;8343 6787;6788 6787 2 9606 Homo sapiens 0.08645910911786814 DLTGVQNLR Unmodified 1014.5458 0.54580778 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q14917;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 6 0.816 1 1 1 44.671 44.755 2 5.6422E-06 11565 20230619_1886_Aki_TMTPro18x_K_F6 182.69 116.01 750700 556470 673980 735030 747710 820070 853250 797420 984210 895480 964410 976850 995580 850700 911150 977920 1092800 1038300 693160 511110 692590 728640 773880 822210 858010 818990 994200 902430 991860 983710 1011300 888460 938360 983910 1043500 985750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 584880000 4464 1022;3868 4248 8344;8345;8346 6789;6790;6791 6789 3 9606 Homo sapiens 0.039116708121468946 DLTIGQMQGK Oxidation (M) 1105.5438 0.54375887 1224 A0A140VK39;Q9Y570;Q9Y570-4;Q9Y570-2;Q9Y570-3 PPME1 Protein phosphatase methylesterase 1 yes no 0 1 0 6 0 1 44.554 44.643 2 0.0010017 11543 20230619_1886_Aki_TMTPro18x_K_F6 109.11 76.217 40223 30004 34977 39842 42714 41719 44766 36078 47500 42454 50701 50132 48885 36245 46715 52288 53207 48671 37132 27559 36109 39438 43775 41929 45080 37457 48340 42806 51788 50093 49815 38705 47929 52067 50814 46283 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28785000 4465 1224 4249 8347 6792 6792 760 1 9606 Homo sapiens -0.004791259879766585 DLTIGQMQGK Unmodified 1089.5488 0.54884425 1224 A0A140VK39;Q9Y570;Q9Y570-4;Q9Y570-2;Q9Y570-3 PPME1 Protein phosphatase methylesterase 1 yes no 0 0 0 7 0 1 49.942 50.023 3 0.00042525 13595 20230619_1887_Aki_TMTPro18x_K_F7 106.18 82.805 62408 45258 57413 67822 60376 70402 63013 63959 82580 82302 78391 73076 84812 78427 76723 88279 85052 103250 57628 41633 58846 66629 62625 70818 63993 66277 82887 81946 80866 74807 86023 81261 78689 89352 81423 97841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192310000 4466 1224 4249 8348 6793 6793 1 9606 Homo sapiens 0.007651778746321725 DLTNVQNLQK Unmodified 1171.6197 0.619701 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 7 0.707 1 2 1 48.734 48.814 2;3 1.276E-06 13030 20230619_1887_Aki_TMTPro18x_K_F7 208.72 132.98 398790 336020 373370 395700 442120 494930 462890 465240 587980 471260 520190 491580 545040 417040 495800 576950 574720 494200 368620 308120 382610 396060 454650 492270 469280 477400 588860 476820 537760 495970 552940 441160 509800 572360 548570 470560 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 626850000 4467 1022;3868 4250 8349;8350;8351;8352 6794;6795;6796;6797 6795 4 9606 Homo sapiens 0.04075594183791509 DLTPAVTDNDEADKK Unmodified 1630.7686 0.76860967 3672 P57772;C9J8T0;P57772-2 EEFSEC Selenocysteine-specific elongation factor yes no 0 0 1 3 0 1 45.055 45.128 3 3.9547E-06 11886 20230619_1882_Aki_TMTPro18x_K_F3 105.28 83.474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4468 3672 4251 8353 6798 6798 1 9606 Homo sapiens -0.0215438949462623 DLTPEHLPLLR Unmodified 1302.7296 0.7295858 1436 A0A384MTI8;Q96C86;Q53G42;A0A3B3ITF0 DCPS m7GpppX diphosphatase yes no 0 0 0 6 0 1 51.929 52.006 3 7.9908E-13 14815 20230619_1886_Aki_TMTPro18x_K_F6 211.68 171.53 44450 36125 39947 41177 44014 46226 45232 45851 57818 56871 57713 59475 55797 52506 59247 64194 53807 62949 41065 33119 41019 41250 45441 46370 45929 47155 58193 56970 59157 60022 57198 54983 59919 64240 51599 59769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128100000 4469 1436 4252 8354 6799 6799 1 9606 Homo sapiens 0.09033019522985342 DLTQMADELRR Unmodified 1346.6612 0.66124824 3575 P41227-2;P41227;C9JN83 NAA10 N-alpha-acetyltransferase 10 yes no 0 0 1 5 0 1 50.589 50.665 3 0.00028452 14059 20230619_1885_Aki_TMTPro18x_K_F5 107.34 81.87 47902 44930 51793 46197 51268 58064 65661 53609 54693 61704 58750 57754 68842 60765 72636 50130 52690 56912 44364 41133 52263 46744 53635 57731 65012 55310 56550 61807 60562 58874 70099 62029 72567 51017 50636 53968 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108290000 4470 3575 4253 8355 6800 6800 1 9606 Homo sapiens 0.0017840688080923428 DLTSWVTEMK Oxidation (M) 1224.5696 0.56963927 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 1 0 6.5 0.5 1 1 58.898 58.947 3 0.030819 17343 20230619_1887_Aki_TMTPro18x_K_F7 49.3 29.844 46867 35528 50863 50648 45103 51327 54337 50178 51886 58660 56835 58936 59714 53518 60460 61608 55631 64096 43348 32656 51252 49909 47533 51810 54190 51587 53235 58823 58240 59623 60895 55806 61210 61921 53333 60821 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105030000 4471 1022;3868 4254 8356;8357 6801;6802 6802 584 2 9606 Homo sapiens -0.03366276536371515 DLTTAGAVTQCYR Unmodified 1454.6824 0.68237762 3788 Q02543;M0R3D6;M0R1A7;M0R117;B4DM74;B2R4C0;M0R0P7;Q32XH3 RPL18A 60S ribosomal protein L18a yes no 0 0 0 7 0.816 2 2 2 45.871 45.941 2;3 2.7269000000000003E-45 12091 20230619_1886_Aki_TMTPro18x_K_F6 298.61 256.01 492670 404870 451040 484260 443560 515860 495850 531310 550750 466070 372040 371730 506550 392750 421350 533950 488340 459180 455260 371340 461760 483040 463060 519540 498690 539830 551000 471800 396050 382640 508590 412090 434250 529770 466390 437030 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4158999999.9999995 4472 3788 4255 8358;8359;8360;8361;8362;8363 6803;6804;6805 6803 3 9606 Homo sapiens -0.026776278103170625 DLTVANVGDSR Unmodified 1145.5677 0.56766543 4049 Q5SGD2;Q5SGD2-2;Q5SGD2-3 PPM1L Protein phosphatase 1L yes no 0 0 0 3 0 2 43.688 43.757 2 3.9871E-17 11243 20230619_1882_Aki_TMTPro18x_K_F3 230.61 167.08 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4473 4049 4256 8364;8365 6806;6807 6806 2 9606 Homo sapiens 0.0007043077002890641 DLTVCEPPK Unmodified 1057.5114 0.51139611 4248 Q8ND56-3;Q8ND56-2;Q8ND56;A0A140TA76;K7EMZ9;I3L4Q1 LSM14A Protein LSM14 homolog A yes no 0 0 0 4 0 1 46.294 46.338 3 0.002672 12297 20230619_1883_Aki_TMTPro18x_K_F4 86.136 0 55867 51318 56209 51961 54748 58661 56694 55888 77944 66751 64157 70068 76809 64607 65349 81522 79475 74926 51700 46979 57016 52556 57057 58783 57710 57576 77649 67016 67058 70797 77464 67710 67519 81236 75874 71252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61325000 4474 4248 4257 8366 6808 6808 1 9606 Homo sapiens -0.01505913390974456 DLVAQAPLKPK Unmodified 1178.7023 0.70230842 317 A0A024R534;O94776;O94776-2 MTA2 Metastasis-associated protein MTA2 yes no 0 0 1 1.5 0.5 1 1 48.195 48.23 3 0.0022697 13597 20230619_1881_Aki_TMTPro18x_K_F2 84.289 59.435 246880 189520 223200 228660 262140 291930 284060 267100 342460 288300 280400 244120 331900 228000 266740 301430 291590 270050 228020 173890 229350 228560 269940 289830 286820 275110 343050 289050 292570 249470 333660 239860 273930 299880 278600 256910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 323160000 4475 317 4258 8367;8368 6809 6809 1 9606 Homo sapiens 0.12010535982608417 DLVDGLR Unmodified 786.42357 0.42356738 4785 yes no 0 0 0 2.5 0.5 2 2 42.953 43.027 2 0.0043317 11199 20230619_1881_Aki_TMTPro18x_K_F2 148.98 72.151 + 1010700 833800 851960 956570 1041800 1080000 1120300 1005300 1587800 1151500 1283500 1209900 1247700 984600 1096300 1307000 1398700 1214800 933420 764430 882160 957650 1069800 1081500 1138600 1036400 1577400 1158800 1328700 1218600 1267300 1040300 1135200 1302500 1334100 1155500 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1413900000 4476 4785 4259 8369;8370;8371;8372 6810;6811 6810 2 9606 Homo sapiens 0.02181253800574723 DLVEALER Unmodified 943.49746 0.4974606 2111 A8K7S5;O75449;B7ZBC9;B7ZBC8;B3KUK7;B2RDY3;A0A024RDP8;Q9BW62 KATNA1;KATNAL1 Katanin p60 ATPase-containing subunit A1;Katanin p60 ATPase-containing subunit A-like 1 yes no 0 0 0 2 0 1 53.549 53.577 2 0.0095993 16001 20230619_1881_Aki_TMTPro18x_K_F2 101.25 62.931 76845 58933 74132 77107 74028 89748 84478 82166 102810 89305 84346 89815 100890 78533 84969 94558 86141 99428 71008 54116 75561 76533 77274 89590 85126 84658 102960 89924 88162 90754 101630 82275 86803 95010 82499 94337 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41401000 4477 2111 4260 8373 6812 6812 1 9606 Homo sapiens 0.023451771722420744 DLVEAVAHILGIR Unmodified 1404.8089 0.80889876 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 4.5 0.5 1 1 66.91 66.923 3 2.9437E-26 20884 20230619_1885_Aki_TMTPro18x_K_F5 210.95 166.2 7528.2 5728.5 7535.4 6294.7 5401.9 5768.6 6078.4 4925.9 7076.3 7418.1 6841.5 6421.5 8367.6 7918.6 7564.6 8273.8 7698.4 9488.1 6958.1 5251.5 7612.6 6308.7 5797.7 5858.4 6123.5 5162.5 7148.5 7337.7 7095.2 6616.6 8458.8 8138.2 7718.2 8374.6 7376.8 8992.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3977000 4478 3606 4261 8374;8375 6813;6814 6814 2 9606 Homo sapiens 0.1226866647712086 DLVEMCR Unmodified 921.40482 0.40482255 4389 Q96QK1;Q53FR4 VPS35 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 3 0 1 43.942 44.012 2 0.057866 11376 20230619_1882_Aki_TMTPro18x_K_F3 82.671 39.605 380060 243830 340700 361750 418040 487000 407000 400120 488930 479630 541160 551610 556240 490310 477150 513910 595240 543660 350660 224390 350690 357070 428220 480750 413550 416850 495570 482790 553420 554550 563650 508950 493270 517690 568030 516240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120750000 4479 4389 4262 8376 6815 6815 1 9606 Homo sapiens -0.05902367157136723 DLVEYFK Unmodified 912.45928 0.45928418 4257 Q8NHH9-2;Q8NHH9;B7Z2H0;B5MCN0;Q8NHH9-3;Q8NHH9-5;Q8NHH9-4;C9JQQ5;B7Z8V5 ATL2 Atlastin-2 yes no 0 0 0 6 0 1 60.401 60.459 3 0.013517 18307 20230619_1886_Aki_TMTPro18x_K_F6 81.958 49.827 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4480 4257 4263 8377 6816 6816 1 9606 Homo sapiens -0.0004470874242770151 DLVIERPRPDSR Unmodified 1451.7845 0.78447492 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DM27 PRRC2C Protein PRRC2C yes no 0 0 2 5.5 0.5 1 1 36.048 36.124 4 3.6329E-05 8009 20230619_1886_Aki_TMTPro18x_K_F6 110.8 74.467 144830 108540 133450 153760 150390 177940 165180 163130 209670 175830 181210 192980 196030 167630 152300 199210 205770 191510 133770 99761 136910 151800 155450 177680 167020 168020 209870 177630 187930 194250 197590 175390 158840 199130 196260 182030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135300000 4481 2894 4264 8378;8379 6817;6818 6818 2 9606 Homo sapiens 0.076654063235992 DLVLSVHNR Unmodified 1051.5774 0.57744226 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DRG9;B4E3R6 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 0 7 0 1 40.028 40.093 3 1.2451E-05 9282 20230619_1887_Aki_TMTPro18x_K_F7 155.42 117.94 40980 32815 32808 41466 40056 42404 42102 45589 50798 35941 41227 42134 40713 36121 40178 41280 45363 37520 37825 30117 34167 41170 41106 42881 42595 46094 50824 37047 42737 42304 41563 37711 41153 41195 43298 35705 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15284000 4482 1555 4265 8380 6819 6819 1 9606 Homo sapiens 0.05371663566097595 DLVPDLSNFYAQYK Unmodified 1671.8144 0.81443765 842 A0A087WXX8;A0A087WWT1;P21912 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes no 0 0 0 1 0 1 63.75 63.75 3 4.6055E-05 20015 20230619_1880_Aki_TMTPro18x_K_F1 101.53 84.867 17154 16511 18745 24113 21037 27768 27022 24106 33924 20834 21176 19168 22269 20210 18425 27791 21532 23424 15891 15168 18989 23755 21869 27695 27086 24803 33615 21216 22357 19600 22529 21203 19029 27532 20585 22288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28044000 4483 842 4266 8381 6820 6820 1 9606 Homo sapiens 0.00540300478314748 DLVPDNSK Unmodified 886.43961 0.43961137 4012 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 C14orf166 UPF0568 protein C14orf166 yes no 0 0 0 3.33 0.471 2 1 43.817 43.874 2;3 0.0022981 11216 20230619_1883_Aki_TMTPro18x_K_F4 105.57 81.413 33969 22637 36378 40670 45663 51779 45861 47974 63509 39408 51417 49540 42199 41070 48432 39385 48689 50366 31392 20882 36926 39699 46734 51388 46760 49037 63112 40643 52913 49553 43697 42542 49103 40254 46594 47715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75717000 4484 4012 4267 8382;8383;8384 6821;6822 6822 2 9606 Homo sapiens -0.008150847531851468 DLVSLACDPASQQPGPSWYLG Unmodified 2260.047 0.047033132 3413 P08651-5 NFIC Nuclear factor 1 C-type yes yes 0 0 0 6.5 0.5 1 1 65.884 65.918 3 0.0010737 20503 20230619_1887_Aki_TMTPro18x_K_F7 70.942 61.527 4929.5 5058.1 6433.5 7148.8 5402.8 7836.9 6114.1 8687 9980.1 6966.5 6517 8136.6 8119.9 7239.3 6929.8 8129.4 8394.5 8866.2 4576.9 4643.9 6401.2 7055.2 5730.9 7883.6 6248.4 8762.3 9803.1 7172.4 6929 8173.6 8185.5 7543.1 7154.9 8193 8020.9 8411.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39184000 4485 3413 4268 8385;8386 6823 6823 1 9606 Homo sapiens -0.03258850304109728 DLVSSLTSGLLTIGDR Unmodified 1645.8887 0.88866522 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 2 0 1 65.548 65.555 3 4.6856E-34 21019 20230619_1881_Aki_TMTPro18x_K_F2 258.41 241.2 8891.9 8413.2 9412.1 9706.9 7694.9 8975.1 8181.9 8609.9 10166 10586 11598 12766 13298 11565 9298.9 11979 13591 13773 8234.1 7709.9 9492.7 9689.8 8147.3 9124.9 8290.9 8877.3 10305 10659 11909 12815 13333 11991 9777.3 12125 12963 13062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25111000 4486 161 4269 8387 6824 6824 1 9606 Homo sapiens 0.09155643569806671 DLVVPEKWEESGPQFITNSEEVR Unmodified 2687.3079 0.3078755 3845 Q13257 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes yes 0 0 1 4.5 0.5 1 1 61.479 61.505 3 4.6577E-13 18951 20230619_1883_Aki_TMTPro18x_K_F4 127.1 119.11 40555 32588 38060 41344 28281 34347 35519 33325 34624 42332 44056 33459 42940 35291 42475 37410 32402 27569 37477 29909 38742 40941 30366 35238 35393 34378 35725 42022 44645 34456 43805 36455 42615 37039 31066 26307 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142570000 4487 3845 4270 8388;8389 6825;6826 6825 2 9606 Homo sapiens 0.03171388156761168 DLWEYIED Unmodified 1081.4604 0.4604064 4741 Q9Y4X5;Q59FM8;A0A087WT96 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes no 0 0 0 1 0 1 65.54 65.54 2 0.061941 20755 20230619_1880_Aki_TMTPro18x_K_F1 69.344 63.757 4684.5 4990.9 5517.2 5352.1 4636.9 6557.3 5816.6 4967.8 6187.2 6266.6 9289.3 6669.7 8815.3 6893.7 7160.3 7312.1 7521.4 9056 4346.2 4569 5523.3 5392.6 4926.2 6501.4 5810.1 5222.6 6399.3 6279.3 9343.8 6772.2 8926.2 7132.1 7331.5 7438.2 7203.6 8577.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15889000 4488 4741 4271 8390 6827 6827 1 9606 Homo sapiens -0.07706539164178139 DLWYLETEKPPPPAR Unmodified 1810.9254 0.92538508 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4;Q05C05;P51610-3 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 1 6.5 0.5 1 1 55.405 55.474 3 1.0058E-10 15930 20230619_1887_Aki_TMTPro18x_K_F7 160.79 126.51 226010 199880 239570 240860 224010 267470 244800 253220 260820 301460 297980 283220 326840 276690 271650 324480 292380 357850 209190 183290 242020 240270 234580 268090 246270 260910 266540 301480 305110 288200 330000 288270 278670 327000 280000 339300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 178250000 4489 1331 4272 8391;8392 6828;6829;6830;6831 6829 4 9606 Homo sapiens 0.05235940186366861 DLYANTVLSGGTTMYPGIADR Oxidation (M) 2230.0576 0.057597819 3112;3679;4827 P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;Q96FU6;Q96DE1;A5GZ75;A4UCT3;F1BXA6;Q9UE89;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;V9HVZ7 ACTG1;ACTB;PS1TP5BP1;HEL-176 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 1 0 6.09 2.27 1 1 2 4 3 59.262 59.306 3 8.8036E-17 17508 20230619_1888_Aki_TMTPro18x_K_F8 161.97 145.48 596280 512000 546600 652080 585420 650030 666160 654200 729660 684870 642710 590240 760920 605740 610690 735180 638860 690710 551150 469820 560660 646870 607310 657540 668880 668940 736470 687790 668260 604360 765430 631430 625890 733880 611340 656320 11 11 11 11 11 11 11 11 11 11 11 11 11 11 11 11 11 11 31268000000 4490 3112;3679;4827 4273 8393;8394;8395;8396;8397;8398;8399;8400;8401;8402;8403 6832;6833;6834;6835;6836;6837;6838;6839;6840;6841;6842;6843;6844 6841 1806 13 9606 Homo sapiens -0.008228676496401022 DLYANTVLSGGTTMYPGIADR Unmodified 2214.0627 0.062683196 3112;3679;4827 P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;Q96FU6;Q96DE1;A5GZ75;A4UCT3;F1BXA6;Q9UE89;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;V9HVZ7 ACTG1;ACTB;PS1TP5BP1;HEL-176 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 0 0 7.86 0.35 2 12 68.435 68.458 2;3 4.0306000000000005E-45 18616 20230619_1888_Aki_TMTPro18x_K_F8 261.74 217.45 735490 532330 652170 679570 595610 707980 708970 669630 810490 1077500 747650 924580 1082500 748960 766270 810010 834010 904700 678940 488780 668700 674550 626480 712840 711430 697370 819600 1061800 785500 937770 1077900 782650 788620 818110 797800 858020 12 10 12 12 10 14 13 11 13 12 11 12 12 11 12 11 13 13 55319000000 4491 3112;3679;4827 4273 8404;8405;8406;8407;8408;8409;8410;8411;8412;8413;8414;8415;8416;8417 6845;6846;6847;6848;6849;6850;6851;6852;6853;6854;6855;6856;6857;6858;6859 6847 15 9606 Homo sapiens 0.004214362129914662 DLYDAGVK Unmodified 879.4338 0.43379771 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;H0YMU9;H0YL33;H0YM50;B3KRQ1;H0YN28;H0YNP5 ANXA2;HEL-S-270 Annexin A2;Annexin yes no 0 0 0 4 0.816 1 1 1 47.914 47.98 2 0.0011276 13230 20230619_1882_Aki_TMTPro18x_K_F3 148.38 24.303 768070 570840 657330 669690 916330 980710 785570 760680 1065800 1011900 1259500 1217800 1233700 1034600 1020100 1129600 1325400 1269800 708960 523680 680840 672210 928370 963240 808300 798910 1077400 1015900 1281300 1220800 1249800 1078500 1058400 1141200 1264800 1204800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3966099999.9999995 4492 368 4274 8418;8419;8420 6860 6860 1 9606 Homo sapiens -0.010741832648591298 DLYDVLAK Unmodified 935.4964 0.49639797 1293 A0A1S5UZH2;Q8TDZ2;Q8TDZ2-4;Q8TDZ2-2;H0Y6Z4 MICAL1 Protein-methionine sulfoxide oxidase MICAL1 yes no 0 0 0 6 0 1 60.134 60.196 3 0.03303 18199 20230619_1886_Aki_TMTPro18x_K_F6 57.96 25.119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4493 1293 4275 8421 6861 6861 1 9606 Homo sapiens 0.026069628033155823 DLYEDELVPLFEK Unmodified 1608.7923 0.79230522 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PH35;A0A6Q8PEX7 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 3 0 1 64.295 64.327 2 0.091982 20310 20230619_1882_Aki_TMTPro18x_K_F3 66.435 50.544 2738.2 2224.1 4009 4822.5 3558.7 4496.2 2580.1 3427.3 3703.9 4364.4 4723.8 3196.7 4426.6 3216.5 4924.9 3653.2 3290.2 5659.9 2541.6 2056.1 3964 4645.2 3709.6 4541.4 2699.8 3599.8 3754 4325.3 4775.9 3302.9 4543.9 3348.5 4902.9 3779.3 3180.3 5345.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36204000 4494 3254 4276 8422 6862 6862 1 9606 Homo sapiens 0.012260760098570245 DLYEPSHGAK Unmodified 1115.5247 0.52473799 3250 O43252;Q05BW9;Q4W5H3 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 3.5 0.5 1 1 38.026 38.074 3 0.00055862 8813 20230619_1882_Aki_TMTPro18x_K_F3 98.898 54.356 299690 224900 299410 258890 370220 327590 352660 300860 349020 387620 473330 349010 374660 295550 433480 395060 423850 355450 276970 206270 304910 259720 377740 325730 356500 311560 360740 385860 474740 354710 388050 311980 439000 393330 405150 338280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 420430000 4495 3250 4277 8423;8424 6863;6864 6863 2 9606 Homo sapiens -0.028403392873769917 DLYGPDNHLVEWHR Unmodified 1749.8223 0.82231699 119 Q96GM5;A0A024R102;A0A024R137;Q96GM5-2;F8VRQ4;A8K9I5;F8VZ70;Q6STE5-2;B3KXL9;A0A090N8Z9;Q6STE5;B7Z4U8;B7ZA58 SMARCD1;SMARCD3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 yes no 0 0 0 4 0 1 46.715 46.757 4 0.00058333 12548 20230619_1883_Aki_TMTPro18x_K_F4 71.279 62.116 19507 16917 19772 19525 22242 28560 20575 23612 29656 19022 23115 26400 26193 22209 23743 28555 30500 29112 18047 15507 20102 19624 22911 28069 21128 24330 29403 19719 24179 26336 26531 23378 24585 28609 29107 27650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53458000 4496 119 4278 8425 6865 6865 1 9606 Homo sapiens -0.022601274815997385 DLYIRPNIAQK Unmodified 1329.7405 0.74048484 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 1 2 0 1 47.934 48.005 3 0.00010906 13489 20230619_1881_Aki_TMTPro18x_K_F2 121.9 84.34 426710 363290 413630 383480 398250 400040 435470 403620 454450 320080 338770 289360 315040 260300 395450 381090 353350 271970 394560 332780 420790 386150 415540 403620 437490 409990 456850 327250 351890 294620 326090 275730 398280 375010 337930 259770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214370000 4497 4746 4279 8426 6866 6866 1 9606 Homo sapiens 0.08880421897288215 DLYSALIK Unmodified 921.51713 0.51713341 3318 O75844;B3KNM6 ZMPSTE24 CAAX prenyl protease 1 homolog yes no 0 0 0 1 0 1 59.328 59.328 2 0.0034787 18239 20230619_1880_Aki_TMTPro18x_K_F1 119.27 52.593 74186 63083 81496 91106 87258 104940 100870 99016 115480 98376 98293 91582 110300 84482 100910 106010 98414 112160 68670 57968 82348 89844 90597 104870 101340 101540 116100 99290 102150 93089 111680 88587 102680 106510 94282 106420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49057000 4498 3318 4280 8427 6867 6867 1 9606 Homo sapiens 0.05323553182995511 DLYVHTMR Oxidation (M) 1049.4964 0.49641475 2392 E5RIN8;E5RG48;J3KNV5;H0YBS1;B3KRB0;Q75QN2-2;Q75QN2 INTS8 Integrator complex subunit 8 yes no 0 1 0 5.5 0.5 1 1 34.126 34.192 3 0.05973 7327 20230619_1886_Aki_TMTPro18x_K_F6 43.635 31.68 24630 19966 27544 28993 32576 32893 32453 31363 42257 32173 34705 36908 34259 31037 32547 34707 40545 33523 22795 18352 27820 28579 33417 32929 33022 32173 42164 32638 35958 37047 34924 32387 33576 34752 38668 31878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24030000 4499 2392 4281 8428;8429 6868 6868 1473 1 9606 Homo sapiens -0.026353604683208687 DMAAAGLHSNVR Oxidation (M) 1256.5932 0.59316868 679 B3KMP2;A8KAQ7;A5D8X2;A0A024RBJ3;Q9UJX3-2;Q9UJX3;Q2M2R1;Q4KMX6;H0YIX7 ANAPC7 Anaphase-promoting complex subunit 7 yes no 0 1 0 5.25 0.829 1 1 2 30.275 30.333 3 1.9282E-05 5626 20230619_1883_Aki_TMTPro18x_K_F4 121.01 102.98 28842 24055 28728 29641 31201 39865 32291 32304 40501 31495 35880 34922 32049 25828 42344 32546 52120 35297 26672 22068 29243 29605 32298 39346 32749 33500 40575 31996 36878 34993 33330 27306 43353 32784 49657 33558 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35781000 4500 679 4282 8430;8431;8432;8433 6869;6870;6871 6869 415 3 9606 Homo sapiens -0.024864179791848073 DMAAPGTSSVPAPTAGNAEK Oxidation (M) 1886.868 0.86800613 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 1 0 4 0 1 42.525 42.569 3 4.8433E-08 10618 20230619_1883_Aki_TMTPro18x_K_F4 108.71 96.737 14386 12827 13711 17890 18083 18357 18322 15655 20857 21569 22542 19280 19653 18666 18375 24393 22852 22832 13304 11780 14075 17644 18433 18468 18529 16348 21176 21418 22898 19672 20107 19569 18989 24315 21821 21703 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84086000 4501 1002 4283 8434 6872 6872 563 1 9606 Homo sapiens -0.039953148721451726 DMAHQVQELFR Unmodified 1372.6558 0.65576893 249 A0A024R3K2;Q96CM3-2;Q96CM3 RPUSD4 RNA pseudouridylate synthase domain-containing protein 4 yes no 0 0 0 6.5 0.5 1 1 53.969 54.041 3 1.3651E-17 15352 20230619_1887_Aki_TMTPro18x_K_F7 206.1 178.77 46803 43413 44867 50496 44934 45750 44793 45281 55171 49394 48046 45486 47303 41878 50685 52207 50116 51846 43298 39790 45762 50358 46654 46638 45505 46416 55333 49594 49593 46246 48476 43862 51459 52274 47968 49241 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90623000 4502 249 4284 8435;8436 6873 6873 1 9606 Homo sapiens -0.01565271911022137 DMAQSIYRPSK Oxidation (M) 1310.6289 0.62888548 3859 Q6I9S2;Q13573;G3V3A4;G3V4X8;B7Z9X2;B4DY36;A0A024R6E3;B4DEG7;Q9ULA6 SNW1 SNW domain-containing protein 1 yes no 0 1 1 8 0 1 38.175 38.161 3 0.040329 8757 20230619_1888_Aki_TMTPro18x_K_F8 58.398 47.137 49015 36671 46616 54148 71873 69683 64187 67224 75116 48907 66755 65269 62079 56347 57946 61292 62192 55996 45280 33723 47973 53421 72389 69224 65485 68344 75471 50951 68667 65260 63338 58635 59247 61221 59421 53264 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69604000 4503 3859 4285 8437 6874 6874 2535 1 9606 Homo sapiens -0.01400380522204614 DMDDEESWIK Oxidation (M) 1282.5023 0.50234756 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q14917;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 1 0 1 0 1 51.499 51.499 2 0.00048273 14964 20230619_1880_Aki_TMTPro18x_K_F1 119.62 103.39 46777 41189 47745 51158 55423 56817 59767 61004 60112 70590 68114 66487 74620 55191 66438 70017 72459 77817 43281 37782 48558 50927 57023 57132 60030 62269 61606 70665 69786 67296 75503 58149 68055 70545 69307 73808 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60953000 4504 1022;3868 4286 8438 6875 6875 585 1 9606 Homo sapiens -0.12760351537986026 DMDDEESWIK Unmodified 1266.5074 0.50743294 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q14917;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 55.603 55.613 2 0.00018378 16676 20230619_1880_Aki_TMTPro18x_K_F1 155.84 121.31 108470 92940 98215 98361 83980 119890 119230 118400 141740 123890 118820 123200 127820 109170 122440 127640 132260 149540 100250 85134 100460 99231 89565 119520 118850 121180 142150 124930 123430 124600 129930 114100 125180 129180 126570 141740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116800000 4505 1022;3868 4286 8439;8440 6876;6877 6876 2 9606 Homo sapiens -0.11516047675354457 DMDLVEVNEAFAPQYLAVER Unmodified 2308.1045 0.10454801 2292 B2RB23;P42765;A0A0B4J2A4;K7EME0 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes no 0 0 0 4 0 1 63.82 63.828 3 1.9188E-05 19968 20230619_1883_Aki_TMTPro18x_K_F4 92.932 81.486 6256.5 4139.7 4416.1 4823.5 4911.6 5790.1 5704 4658.6 4899.6 5568.6 6056.4 8589.4 5996.9 5165.4 6446.2 8084.7 6814.4 10038 5764.3 3799.3 4649.7 4827.5 5088.5 5755.8 5679 4866.8 5085.9 5667.4 6176.9 8460.6 6144.5 5595.6 6577.9 8179.6 6538.7 9501.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15178000 4506 2292 4287 8441 6878 6878 1 9606 Homo sapiens 0.0028199190151099174 DMDLWEQQEEER Oxidation (M) 1622.6519 0.65186535 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 1 0 1 0 1 46.194 46.194 2 1.4351E-07 12767 20230619_1880_Aki_TMTPro18x_K_F1 168.05 154.46 47316 35806 34615 44600 46358 44237 50330 50152 52998 57432 48886 46384 60254 44540 41994 70741 50860 53569 43634 32864 36453 44310 47301 44916 50581 51012 53738 57301 50815 47572 60231 47406 43676 69615 48595 51052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116430000 4507 3152 4288 8442 6879 6879 1829 1 9606 Homo sapiens -0.13455450986020878 DMDLWEQQEEER Unmodified 1606.657 0.65695073 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 1 0 1 52.414 52.414 2 1.3735E-18 15350 20230619_1880_Aki_TMTPro18x_K_F1 281.83 267.63 63855 51342 57201 61807 39653 67506 63347 65398 66505 81217 71780 64765 83981 66420 60566 85771 75801 81105 58988 47097 58459 61639 43410 67723 62623 67359 67859 80712 73861 66584 84184 69522 62982 85541 72416 77064 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72695000 4508 3152 4288 8443 6880 6880 1 9606 Homo sapiens -0.12211147123412047 DMDNQIFGAYATHPFK Unmodified 1853.8407 0.84066917 2439 Q8NI08;Q8NI08-2;B3KXK4;H0UI55;Q8N3C8;Q8NI08-7;Q8N4U9;Q3ZTS4;H0Y5F6;H0Y6T0;Q8NI08-5 NCOA7;DKFZp761B2210 Nuclear receptor coactivator 7 yes no 0 0 0 8 0 1 58.019 58.066 3 3.6313E-09 17012 20230619_1888_Aki_TMTPro18x_K_F8 144.08 127.95 48574 38822 50608 61116 29640 39665 49474 49952 58089 59146 56418 56897 60920 50687 61569 69043 71103 73748 44924 35720 50997 59580 33034 41936 49025 50603 58627 59201 58177 57668 62071 53481 63164 69320 67957 69986 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35327000 4509 2439 4289 8444 6881 6881 1 9606 Homo sapiens -0.05209753621920754 DMDRDVDR Unmodified 1020.4295 0.42945739 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 1 1 0 1 29.279 29.279 3 0.0053945 5724 20230619_1880_Aki_TMTPro18x_K_F1 106.93 77.453 33483 16235 32625 35483 44561 46157 33935 44491 53424 37046 44177 47640 44540 38683 40754 30958 54358 43709 30875 15049 33399 34354 45076 45791 35455 45332 52908 38187 45790 47546 45289 39798 42196 31988 51804 41419 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14073000 4510 3610 4290 8445 6882 6882 1 9606 Homo sapiens -0.07994015750080052 DMEDPTPVPNIEEVVLPK Oxidation (M) 2036.9976 0.99762332 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 1 0 3 0 1 62.462 62.492 3 0.013647 19429 20230619_1882_Aki_TMTPro18x_K_F3 51.193 33.393 30435 27045 27993 30988 29803 31764 34700 34833 32636 36440 40060 33503 35160 28412 34644 36379 35069 40249 28139 24788 28687 30991 30928 32141 34649 35413 33668 36633 40497 33998 35999 29916 35273 36639 33585 38169 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22697000 4511 4016 4291 8446 6883 6883 2652 1 9606 Homo sapiens 0.02060441687126513 DMEDPTPVPNIEEVVLPK Unmodified 2021.0027 0.0027087015 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 0 3.5 0.5 1 1 63.093 63.111 3 0.0069322 19652 20230619_1883_Aki_TMTPro18x_K_F4 64.507 47.429 23536 18563 22284 22961 17393 24354 24237 21538 25156 30749 31190 30096 32211 30317 26618 37026 33808 37714 21749 17034 22680 22845 18677 24446 24075 22453 25836 30561 31750 30602 32601 31611 27622 37106 32304 35799 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128290000 4512 4016 4291 8447;8448 6884 6884 1 9606 Homo sapiens 0.03304745549735344 DMEESIR Oxidation (M) 894.3753 0.37529656 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;A0A0S2Z4D8;A0A0S2Z4W7;A0A0C4DGP4 PRKCSH Glucosidase 2 subunit beta yes no 0 1 0 1 0 1 30.664 30.664 2 0.039547 6234 20230619_1880_Aki_TMTPro18x_K_F1 85.359 41.898 46585 31700 39754 42749 62110 54003 50986 56728 79378 46132 59488 62159 52346 50383 57579 45056 70538 65269 42979 29133 41287 42409 62405 53841 52910 57458 78345 47738 61678 61960 53966 52072 59098 46538 67329 61798 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106850000 4513 444 4292 8449 6885 6885 274 1 9606 Homo sapiens -0.07611607901628759 DMEIAQTQK Oxidation (M) 1078.4965 0.49647433 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;A0A024R2V0;B4DM10 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 1 0 3 0 1 37.992 38.045 3 0.022149 8779 20230619_1882_Aki_TMTPro18x_K_F3 59.052 40.785 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4514 2902 4293 8450 6886 6886 1721 1 9606 Homo sapiens -0.0396340525899177 DMESDYSGQGVDQLQR Oxidation (M) 1842.769 0.76902037 2134 Q53Y97;Q53FB7;A8K9A5;P04818 TYMS Thymidylate synthase yes no 0 1 0 1 0 1 42.101 42.101 3 3.363E-11 11051 20230619_1880_Aki_TMTPro18x_K_F1 153.2 149.98 17256 13822 14549 15890 19727 25887 21877 23004 24196 19696 21916 20284 23150 20168 20602 14992 23463 20444 15933 12673 15101 16008 20178 25338 21998 23596 24413 20113 22636 20556 23471 20542 21118 15477 22401 19371 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16083000 4515 2134 4294 8451 6887 6887 1336 1 9606 Homo sapiens -0.11865337837093648 DMESDYSGQGVDQLQR Unmodified 1826.7741 0.77410575 2134 Q53Y97;Q53FB7;A8K9A5;P04818 TYMS Thymidylate synthase yes no 0 0 0 2 0 1 46.268 46.347 2 0.029721 12750 20230619_1881_Aki_TMTPro18x_K_F2 58.674 43.798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4516 2134 4294 8452 6888 6888 1 9606 Homo sapiens -0.10621033974484817 DMFCAGR Unmodified 855.33674 0.33674298 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 5.5 0.5 1 1 41.901 41.991 2 0.013729 10352 20230619_1886_Aki_TMTPro18x_K_F6 101.21 99.483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4517 4005 4295 8453;8454 6889;6890 6890 2 9606 Homo sapiens -0.09671192017140129 DMFEEALR Unmodified 1009.4539 0.45388123 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57;A0A3B3ITP6;A4FS09 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 2.5 0.5 1 1 53.681 53.721 2 0.014081 16067 20230619_1881_Aki_TMTPro18x_K_F2 94.302 63.229 337780 265440 308700 327940 276940 352590 313670 334060 454840 386260 371830 367610 389980 343090 350490 385600 403190 401320 312030 243580 315680 326380 291880 354140 318560 343890 451920 387210 386110 373160 395730 356980 360190 387610 385250 381020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 223370000 4518 471 4296 8455;8456 6891 6891 1 9606 Homo sapiens -0.05046755596549701 DMFQETMEAMR Unmodified 1387.557 0.55704245 148 P35579;A0A8I5KWT8;A0A024R1N1;P35579-2;Q86XU5;B4E3S1 MYH9 Myosin-9 yes no 0 0 0 4 0.816 1 1 1 59.779 59.807 2 1.2984E-16 18247 20230619_1883_Aki_TMTPro18x_K_F4 225.22 217.84 90553 76213 90268 82419 77360 100530 102220 101840 137180 127140 112820 106530 124570 99842 123500 131090 125680 123360 83745 69829 91508 83027 82216 100300 102690 104580 136800 126550 117380 108880 126680 104910 125760 130780 120210 117260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63684000 4519 148 4297 8457;8458;8459 6892;6893 6893 2 9606 Homo sapiens -0.12123379262561684 DMGEMVTQGQTDAQYMFLR Unmodified 2219.965 0.96495976 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 5.5 0.5 1 1 62.716 62.765 3 0.077826 19193 20230619_1885_Aki_TMTPro18x_K_F5 36.679 32.711 36323 27547 38305 47291 37274 35977 46189 51197 42888 52857 58843 49415 58584 50952 39955 68978 60137 77827 33587 25381 38784 45965 38969 37573 45984 51289 44542 53187 59522 50455 58933 53482 42241 69418 57466 73762 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 281710000 4520 2337;3778;3779 4298 8460;8461 6894 6894 1 9606 Homo sapiens -0.0962241197903495 DMGSCEIYPQTIQHNPNGR Unmodified 2215.9739 0.97388496 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258 COPB2 Coatomer subunit beta' yes no 0 0 0 4.5 0.5 1 1 43.002 43.064 3 7.6312E-15 10835 20230619_1885_Aki_TMTPro18x_K_F5 161.08 154.66 9077.9 6386.1 7409.9 6586.4 7613.5 10775 8379.5 8431.1 10482 9194.2 8309.5 7940.2 12976 10115 8963.4 10932 10965 11417 8373.9 5853 7667 6693.6 7939.5 10519 8468.7 8789.8 10477 9222.5 8826.3 8196.8 12900 10413 9305.9 10994 10475 10837 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38357000 4521 3031 4299 8462;8463 6895 6895 1 9606 Homo sapiens -0.08546302298373121 DMGTVVLGK Oxidation (M) 934.47937 0.4793677 3455;2572 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6;B4DQM6;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B no no 0 1 0 6 0 1 45.536 45.623 2 0.0018118 11943 20230619_1886_Aki_TMTPro18x_K_F6 107 65.022 92777 68469 80582 99190 109400 117160 105150 92343 120350 129050 128640 119820 126710 99516 109870 149450 132220 132460 85642 62954 83418 97799 111250 116530 106690 97067 122150 128190 131430 121430 128540 105990 113480 148300 126290 126000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104270000 4522 3455;2572 4300 8464 6896 6896 1560 1 9606 Homo sapiens 0.009507189258897597 DMGYGNWISKPQEEK Unmodified 1780.809 0.80903469 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;Q59EC0 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 1 7 0 1 52.887 52.958 4 0.0016534 14936 20230619_1887_Aki_TMTPro18x_K_F7 81.526 69.912 39528 35290 43670 49027 46317 60497 51653 47699 62461 52289 54193 57771 58924 50408 57691 57529 59446 61767 36603 32409 44106 48502 48119 59973 52090 49753 62667 52803 56232 58140 59936 52620 58782 57939 56877 58613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83368000 4523 1718;4020 4301 8465 6897 6897 1 9606 Homo sapiens -0.05013746375834671 DMHGQFK Oxidation (M) 877.37524 0.37523698 2974 F5H365;Q15436;B4DSQ5;B4E0Q9;Q15436-2 SEC23A Protein transport protein Sec23A yes no 0 1 0 5 0 1 32.467 32.549 3 0.029227 6583 20230619_1885_Aki_TMTPro18x_K_F5 65.676 42.846 53519 19219 42572 45396 75583 41071 56135 60985 73376 46493 56364 54716 54438 53835 41421 44343 47209 49987 49230 17880 44613 43616 75094 42377 58242 60524 73028 48049 58511 55150 55058 55028 42685 45037 45133 47408 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58084000 4524 2974 4302 8466 6898 6898 1761 1 9606 Homo sapiens -0.06835563110973908 DMHSAYK Oxidation (M) 866.35925 0.35925256 33 A0A024QZD5;P08621-2;P08621;A8KAQ5 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 1 0 4.5 0.5 1 1 30.102 30.173 3 0.0067995 5759 20230619_1885_Aki_TMTPro18x_K_F5 94.662 71.106 34050 8043.8 36687 40354 74313 35056 47379 65524 57948 36840 67365 82600 57195 57348 49603 21402 54649 71232 31365 7675.5 37574 37994 73122 36594 49700 64029 58720 40128 68314 80813 58377 58088 50696 24979 52354 67068 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59818000 4525 33 4303 8467;8468 6899;6900 6900 10 2 9606 Homo sapiens -0.07927269347874244 DMIGIAK Unmodified 746.39966 0.39966081 4199 Q86XP3;Q86XP3-2;B3KTL4;B3KX23 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 0 0 7 0 1 50.019 50.1 2 0.0073621 13624 20230619_1887_Aki_TMTPro18x_K_F7 108.24 55.555 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4526 4199 4304 8469 6901 6901 1 9606 Homo sapiens 0.016316970425464206 DMIHIADTK Oxidation (M) 1058.5066 0.50664508 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;B0QY90;B3KNG0;Q7Z5X3;Q8N7H0;H0Y7E6 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 1 0 3.5 0.5 1 1 40.297 40.346 3 0.015892 9691 20230619_1883_Aki_TMTPro18x_K_F4 63.426 36.912 200510 147710 174070 192600 217610 218820 201180 206730 275980 222870 251170 252160 240260 206740 211010 276460 284350 246010 185080 135660 179750 191130 222180 219050 206100 212460 275770 225380 258330 253230 244280 218350 219480 274800 271090 234130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127260000 4527 2176 4305 8470;8471 6902 6902 1347 1 9606 Homo sapiens -0.020267975337446842 DMIHIADTK Unmodified 1042.5117 0.51173046 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;B0QY90;B3KNG0;Q7Z5X3;Q8N7H0;H0Y7E6 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 0 4.5 0.5 1 1 45.867 45.927 3 0.0020281 12052 20230619_1885_Aki_TMTPro18x_K_F5 90.263 69.933 111540 97200 121820 120500 136550 126680 124620 111860 178480 113090 111030 122430 117100 92300 124440 125140 143620 127650 103260 89162 123070 119870 140220 127370 127940 115410 175930 114660 117450 122820 119690 97973 127460 125370 137120 121280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 314220000 4528 2176 4305 8472;8473 6903 6903 1 9606 Homo sapiens -0.007824936711358532 DMIILPEMVGSMVGVYNGK Unmodified 2052.0094 0.0093907588 984 K7EM56;A0A0B4J2B4;S4R417;K7EQJ5;K7ELC2;P62841;S4R456;K7EJ78 RPS15 40S ribosomal protein S15 yes no 0 0 0 2 0 1 66.158 66.165 3 1.3932E-14 21259 20230619_1881_Aki_TMTPro18x_K_F2 153.72 143.73 29302 19903 29491 25520 21517 33298 26072 26119 28683 31172 30575 27977 34808 26917 30126 39982 28644 34868 27068 18281 29807 25416 23181 32889 26127 27309 29166 31140 31448 28541 35145 28500 30693 39649 27464 33149 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46673000 4529 984 4306 8474 6904 6904 1 9606 Homo sapiens 0.025466439050887857 DMLEAGILDTYLGK Oxidation (M) 1553.7647 0.76471026 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C2U0 CCT8 T-complex protein 1 subunit theta yes no 0 1 0 5.5 1.12 1 1 1 1 63.393 63.426 3 3.5768E-05 19772 20230619_1883_Aki_TMTPro18x_K_F4 101.32 75.62 113820 92758 103600 116140 127690 149890 122780 132130 162630 93925 95683 87794 95650 80707 111680 102740 88702 98868 105160 85117 106540 115780 130760 148560 125280 135150 160560 96933 101310 89256 98387 84658 111970 102710 85162 93909 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 875250000 4530 3621 4307 8475;8476;8477;8478 6905;6906 6905 2299 2 9606 Homo sapiens 0.00997849477971613 DMLEAGILDTYLGK Unmodified 1537.7698 0.76979564 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C2U0 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 7 0 1 64.52 64.549 3 7.1893E-07 19865 20230619_1887_Aki_TMTPro18x_K_F7 131.06 117.92 121120 95966 116160 147010 99851 101560 124470 123420 133700 131660 139610 155450 184890 157250 140930 158260 146540 140740 111930 88271 118340 143600 105600 106630 124400 124900 135960 133340 145030 156770 185160 162150 144480 158030 140110 133880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 548630000 4531 3621 4307 8479 6907 6907 1 9606 Homo sapiens 0.02242153340580444 DMLEFPAQELR Unmodified 1347.6493 0.64928657 2503 B4DJK4;B4E0Q4;B4DZJ7;O00267-2;O00267 SUPT5H Transcription elongation factor SPT5 yes no 0 0 0 3 0 1 59.736 59.765 2 0.0047337 18312 20230619_1882_Aki_TMTPro18x_K_F3 90.108 73.535 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4532 2503 4308 8480 6908 6908 1 9606 Homo sapiens -0.010632098623545971 DMLQAASHYR Oxidation (M) 1206.5452 0.54515585 4278 Q8WUM0;B4E206;B4E3T7;A0A024R3R6 NUP133 Nuclear pore complex protein Nup133 yes no 0 1 0 5.5 0.5 1 1 34.06 34.126 3 0.0041501 7215 20230619_1885_Aki_TMTPro18x_K_F5 71.524 53.66 20597 15503 20451 23185 24402 28442 24086 29170 32839 18840 28154 23521 20091 19247 22471 17375 25312 24467 19035 14259 20865 22842 25052 28359 24582 29457 32702 19756 28721 23542 20892 19894 22936 17906 24185 23167 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13568000 4533 4278 4309 8481;8482 6909 6909 2714 1 9606 Homo sapiens -0.049854918992423336 DMLQAASHYR Unmodified 1190.5502 0.55024123 4278 Q8WUM0;B4E206;B4E3T7;A0A024R3R6 NUP133 Nuclear pore complex protein Nup133 yes no 0 0 0 7.5 0.5 1 1 42.13 42.169 3 0.0035447 10165 20230619_1887_Aki_TMTPro18x_K_F7 72.817 59.309 119940 91487 110240 124690 116550 124840 141260 137580 168150 137820 180710 183460 166940 154080 182170 194010 177620 183660 110780 84048 112990 123180 121240 126500 141810 139720 170080 140700 184270 183290 171610 161900 184800 193720 170030 174530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92395000 4534 4278 4309 8483;8484 6910 6910 1 9606 Homo sapiens -0.037411880366335026 DMNQVLDAYENK Unmodified 1438.6398 0.6398441 401 P23381;A0A024R6K8;P23381-2;G3V3Y5;G3V3H8;G3V277;B4DTK8;G3V456;G3V5U1;G3V423 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 0 0 4.5 0.5 1 1 58.922 58.976 2;3 9.2364E-10 17491 20230619_1885_Aki_TMTPro18x_K_F5 144.28 126.19 40354 31349 39467 38561 35263 45675 41864 38224 55231 44142 41122 49404 50012 46058 47198 52308 52176 57212 37296 28767 40105 38445 37215 45460 42230 39737 54929 44495 43307 49779 50665 47941 48347 52725 49908 54270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47807000 4535 401 4310 8485;8486 6911;6912 6912 2 9606 Homo sapiens -0.06193022938532522 DMPYQPFSK Unmodified 1111.5008 0.50083142 3242 O15371-2;O15371-3;O15371;B0QYA5;B0QYA6;B0QYA8 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 0 8 0 1 53.332 53.406 2 7.7406E-06 15020 20230619_1888_Aki_TMTPro18x_K_F8 178.32 117.67 107110 88933 95198 104530 90278 117540 106210 109300 125520 132270 118340 114440 137550 107660 116810 145450 133660 131930 98963 81551 97701 104460 94785 117650 106780 112810 126580 131900 122560 116790 138750 113320 120240 144710 127710 125460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131120000 4536 3242 4311 8487 6913 6913 1 9606 Homo sapiens -0.050458960454079715 DMQGSAQALAEVVK Unmodified 1445.7184 0.71842877 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A494C1D7 DST Dystonin yes no 0 0 0 6 0 1 57.575 57.644 3 0.0045407 17148 20230619_1886_Aki_TMTPro18x_K_F6 70.197 54.995 31824 28676 33761 35474 30104 36768 31491 33542 38143 37049 41495 33959 41229 34959 39203 39806 35957 45236 29460 26301 34090 35283 31629 37002 31902 34582 38611 37172 42353 34684 41980 36302 39728 40225 34499 42874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71859000 4537 1693 4312 8488 6914 6914 1 9606 Homo sapiens 0.013398293664977245 DMSGTMGFNEFK 2 Oxidation (M) 1394.5483 0.5482519 2734 C9J0K6;P30626-2;P30626;P30626-3;B4DHQ6 SRI Sorcin yes no 0 2 0 4 0 1 49.191 49.229 3 0.0001767 13623 20230619_1883_Aki_TMTPro18x_K_F4 96.64 91.749 69174 58316 73341 73764 92877 87631 87692 83748 97606 87487 100160 89455 98114 92112 91950 105550 101660 117550 64007 53511 74438 73412 94658 87509 89019 85926 98952 88317 102480 90898 99972 95627 94228 106480 97284 111470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103090000 4538 2734 4313 8489 6915 6915 1638;1639 1 9606 Homo sapiens -0.13324029627369782 DMSGTMGFNEFK Oxidation (M) 1378.5533 0.55333728 2734 C9J0K6;P30626-2;P30626;P30626-3;B4DHQ6 SRI Sorcin yes no 0 1 0 5 0 1 53.065 53.136 3 0.00074026 15106 20230619_1885_Aki_TMTPro18x_K_F5 88.803 77.01 189900 154840 169750 189030 184900 207330 202910 201610 228850 249180 263570 251970 271510 212710 231950 287070 271970 276770 175440 142040 174470 188330 191440 208150 204380 207620 233160 249320 269020 254440 274860 224720 239080 286540 259870 262970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53994000 4539 2734 4313 8490 6916 6916 1638;1639 1 9606 Homo sapiens -0.12079725764783689 DMSGTMGFNEFK Unmodified 1362.5584 0.55842266 2734 C9J0K6;P30626-2;P30626;P30626-3;B4DHQ6 SRI Sorcin yes no 0 0 0 6.5 0.5 1 1 58 58.061 3 4.6562E-13 17315 20230619_1886_Aki_TMTPro18x_K_F6 159.44 153.41 127370 99619 123210 130780 99472 141870 135480 118280 157020 170140 159730 167520 188170 162030 152000 183320 171330 212450 117710 91473 125240 129630 106450 141990 135170 123910 158950 169130 165020 169940 189440 168510 156450 185410 164030 201320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 315530000 4540 2734 4313 8491;8492 6917;6918 6917 2 9606 Homo sapiens -0.1083542190215212 DMSIIQWK Unmodified 1019.511 0.51100218 4548 Q9HC35;B5MBZ0;Q9HC35-2;B4DIT9 EML4 Echinoderm microtubule-associated protein-like 4 yes no 0 0 0 1 0 1 60.529 60.529 2 0.0023337 18711 20230619_1880_Aki_TMTPro18x_K_F1 139.88 69.879 96684 82099 96314 92193 67417 95346 86764 83254 96854 128550 105830 121070 119900 102270 111360 126570 121960 134420 89419 75245 97426 92355 73007 95884 86734 87115 98642 127210 108890 122500 121530 107420 114060 127190 116670 127550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32376000 4541 4548 4314 8493 6919 6919 1 9606 Homo sapiens 0.002027116798217321 DMSISNTTMDEFR Unmodified 1545.6439 0.6439432 283 Q53S54;A0A024R475;Q13618-2;Q13618;B7Z600;Q13618-3 CUL3 Cullin-3 yes no 0 0 0 3 0 1 54.016 54.069 2 3.1767E-13 15959 20230619_1882_Aki_TMTPro18x_K_F3 210.35 189.45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4542 283 4315 8494 6920 6920 1 9606 Homo sapiens -0.10705301507164222 DMSLYASLTSEK Oxidation (M) 1359.6228 0.62279705 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 1 0 6 0.816 1 1 1 54.765 54.834 3 8.8326E-05 15979 20230619_1886_Aki_TMTPro18x_K_F6 109.16 90.996 62492 49491 48090 60850 50467 62813 65844 61262 78375 52496 58481 60789 56358 46981 61344 66286 68438 70160 57663 45411 50180 60531 52751 63312 65843 62489 78235 53820 60878 60898 57840 49943 62710 66497 65424 66591 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222550000 4543 630 4316 8495;8496;8497 6921 6921 361 1 9606 Homo sapiens -0.04262943544358677 DMSLYASLTSEK Unmodified 1343.6279 0.62788243 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 6 0 1 59.4 59.462 3 0.053971 17936 20230619_1886_Aki_TMTPro18x_K_F6 44.367 33.108 40699 35270 38282 40490 39280 50989 43488 43998 52078 50813 48270 47914 48090 38859 46406 50268 50038 61887 37628 32330 39128 40602 40912 50590 43872 45603 52428 50905 49697 48460 48998 41024 47445 50962 47923 58614 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67029000 4544 630 4316 8498 6922 6922 1 9606 Homo sapiens -0.03018639681727109 DMSTWVFGAER Unmodified 1297.5761 0.57612163 3924 Q15269 PWP2 Periodic tryptophan protein 2 homolog yes yes 0 0 0 6 0 1 60.419 60.477 2 7.9614E-06 18306 20230619_1886_Aki_TMTPro18x_K_F6 152.04 132.94 48170 38488 46608 48926 39326 54077 50982 47989 56723 50477 46294 46756 47622 43752 53808 54717 52667 55588 44523 35326 47396 48615 41827 54122 50903 49525 57036 50788 48074 47540 48884 45804 54550 54856 50423 52778 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37000000 4545 3924 4317 8499 6923 6923 1 9606 Homo sapiens -0.06076338584989571 DMTGKEDNYR Oxidation (M) 1243.5139 0.5139153 4753 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 1 1 2.5 0.5 1 1 31.984 32.053 3 0.066602 6377 20230619_1882_Aki_TMTPro18x_K_F3 50.108 35.232 36174 21221 33470 33887 57515 47799 45509 46640 51528 41619 47563 38859 34480 30915 42885 22786 37450 22326 33369 19556 34571 33350 57403 47271 46756 47567 51969 42257 48368 39293 36006 31716 43042 23084 35780 21266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18680000 4546 4753 4318 8500;8501 6924 6924 2897 1 9606 Homo sapiens -0.09810109723980531 DMTGKEDNYR Unmodified 1227.519 0.51900068 4753 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 1 3.5 0.5 1 1 36.782 36.832 3 0.056223 8313 20230619_1882_Aki_TMTPro18x_K_F3 39.785 21.473 26933 26955 30514 31693 41905 40890 36747 40639 44982 41795 42813 38209 34334 28722 36747 24251 35373 26639 24967 24702 30872 31744 42445 40660 37611 41537 45272 42064 43628 38601 35415 29714 37175 24627 33797 25308 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58927000 4547 4753 4318 8502;8503 6925 6925 1 9606 Homo sapiens -0.085658058613717 DMTMFVTASK Unmodified 1129.5148 0.51476693 1678 Q13347;A0A7I2YQF8;Q5U0F4;Q53HU7;A0A7I2V613;A0A7I2V607;A0A7I2V3N2;A0A7I2V2M3;A0A7I2V640;A0A7I2YQI2;A0A7I2V3U3;A0A7I2V5V8;A0A7I2YQU2;A0A7P0MRT9;A0A7I2V685;A0A7I2YQI6;Q5TFK1;A0A7I2YQC8;A0A7I2YQT9;A0A7I2V4S8;A0A7I2V3K6;A0A7I2YQP9;A0A7I2V4C2 EIF3I Eukaryotic translation initiation factor 3 subunit I yes no 0 0 0 8 0 1 57.547 57.599 2 1.4213E-07 16783 20230619_1888_Aki_TMTPro18x_K_F8 192.26 128.7 76639 63693 69464 69577 57031 78058 68678 66987 84872 86051 79117 82569 90154 79262 81285 96773 94789 93725 70818 58366 70987 69918 60699 78024 69092 69714 85357 85862 81952 83863 91277 82787 83642 96753 90555 89056 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16657000 4548 1678 4319 8504 6926 6926 1 9606 Homo sapiens -0.04480986608609783 DMTSEQLDDILK Unmodified 1406.6599 0.65991084 3387 P05023;P05023-4;P05023-3;B7Z3V1;B7Z1N5;Q58I23 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 3.5 0.5 1 1 60.746 60.762 3 1.5696E-13 18730 20230619_1882_Aki_TMTPro18x_K_F3 182.71 154.43 48234 48547 51375 52622 50928 76945 63375 63611 89829 66266 60898 65813 66137 56403 70846 76816 71763 72467 44689 44455 51964 53135 53468 75609 63963 65952 88798 66880 64121 66518 67579 59566 72042 76603 68659 68873 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172750000 4549 3387 4320 8505;8506 6927 6927 1 9606 Homo sapiens -0.02715271998613389 DMVGIAQTGSGK Oxidation (M) 1178.5601 0.56013721 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 1 0 5.5 0.5 1 1 40.946 41.037 3 0.0017376 9964 20230619_1885_Aki_TMTPro18x_K_F5 74.698 46.121 187530 144720 193440 166720 220280 232270 234950 217010 255850 182830 190660 194440 195510 167300 192800 201200 198690 168820 173390 132720 196270 167530 226960 229580 236600 221830 256660 187100 198970 196000 199290 175190 196460 199840 189840 160800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288240000 4550 1328 4321 8507;8508 6928 6928 837 1 9606 Homo sapiens -0.022000448218932434 DMVGIAQTGSGK Unmodified 1162.5652 0.56522259 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 7 0 1 46.912 47 2 2.1225E-06 12179 20230619_1887_Aki_TMTPro18x_K_F7 174.77 138.34 137890 122060 142840 135290 139230 161380 156790 156780 185300 186310 190980 207070 217420 166970 188600 224820 257930 239720 127610 111840 144610 135960 145450 161120 157980 161250 187450 187330 196930 207900 219650 176720 196300 225700 245990 227600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102070000 4551 1328 4321 8509 6929 6929 1 9606 Homo sapiens -0.00955740959261675 DMVVDIQR Oxidation (M) 990.48043 0.48043033 4703 Q9Y266;Q9H2R7 NUDC;NPD011 Nuclear migration protein nudC yes no 0 1 0 2.5 0.5 1 1 39.714 39.777 2 0.062698 9696 20230619_1881_Aki_TMTPro18x_K_F2 66.457 46.753 156280 138840 141650 168290 202570 192750 170830 166190 227420 182650 209320 194960 201340 170980 189590 199800 206650 194950 144470 127320 146140 167810 204630 192540 175780 172080 227650 184220 215150 196620 205190 178670 193990 200040 197470 185260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161110000 4552 4703 4322 8510;8511 6930 6930 2867 1 9606 Homo sapiens -0.015190667052024764 DMYDQVLK Unmodified 1010.4743 0.47428232 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49;Q59FY4;Q7Z5W8;B4DIG6;B4DWK9;B4DIW1;B4DK31;B4DIR2;O00763;O00763-2;O00763-3;B4DYM0;Q59GJ9 ACACA;hCG_30204;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase yes no 0 0 0 4 0 1 52.395 52.419 2 0.052489 15095 20230619_1883_Aki_TMTPro18x_K_F4 69.628 56.816 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4553 3833 4323 8512 6931 6931 1 9606 Homo sapiens -0.030535849367424817 DMYGDDLEAR Oxidation (M) 1199.4765 0.47646716 3859 Q6I9S2;Q13573;G3V3A4;G3V4X8;B7Z9X2;B4DY36;A0A024R6E3;B4DEG7;Q9ULA6 SNW1 SNW domain-containing protein 1 yes no 0 1 0 1 0 1 40.124 40.124 2 0.033763 10188 20230619_1880_Aki_TMTPro18x_K_F1 66.962 53.909 18201 13517 17272 17543 20150 22657 21378 16870 28729 22386 24861 25863 20849 21118 22959 24914 28095 24845 16814 12413 17670 17447 20753 22389 21693 17796 28671 22457 25523 25932 21539 22121 23602 24969 26809 23610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91528000 4554 3859 4324 8513 6932 6932 2536 1 9606 Homo sapiens -0.11529200989616584 DNALLAQLIQDK Unmodified 1340.73 0.72997974 1274 P61764-2;P61764;A0A1B0GVQ5;A0A1B0GWF2;A0A1B0GTP9;A0A0D9SG72;A0A2R8Y5D4;B7Z2V7;B7Z1V5;Q59GC9;A0A994J7L2;A0A1B0GW76 STXBP1 Syntaxin-binding protein 1 yes no 0 0 0 7 0 1 63.047 63.08 3 0.0014333 19237 20230619_1887_Aki_TMTPro18x_K_F7 83.692 47.267 207890 171420 195880 232310 130890 171610 181700 184840 213070 261830 268680 307960 310510 282010 263770 363590 297690 368890 192150 157420 199240 228760 142750 178380 181390 190130 217710 261800 275120 309670 313480 295970 271500 364040 285000 350050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186710000 4555 1274 4325 8514 6933 6933 1 9606 Homo sapiens 0.07324394452189154 DNALLSAIEESR Unmodified 1316.6572 0.65720872 4222 Q8N1F7;A8K897;H3BVG0;H3BV11;H3BRI8;H3BM93;H3BNN5 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 2 0 2 58.85 58.863 3 5.7719E-05 18136 20230619_1881_Aki_TMTPro18x_K_F2 119.62 87.555 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4556 4222 4326 8515;8516 6934;6935 6934 2 9606 Homo sapiens 0.011546406587513047 DNDSLAAR Unmodified 860.39881 0.39880919 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 1 0 1 31.022 31.022 2 0.0026623 6390 20230619_1880_Aki_TMTPro18x_K_F1 123.16 102 24578 10859 37063 31523 51952 47942 36915 51695 37267 26695 42491 50624 31671 40993 47855 16855 54943 43090 22757 10130 36786 30329 52268 47287 38161 51830 38110 29036 42966 49926 33539 41282 48586 18908 52419 40693 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21224000 4557 3654 4327 8517 6936 6936 1 9606 Homo sapiens -0.03697426072812959 DNEEETTDDPRK Unmodified 1447.6063 0.60629536 2446 Q99459;B3KY60 CDC5L Cell division cycle 5-like protein yes no 0 0 1 1 0 1 32.24 32.24 3 0.002708 6879 20230619_1880_Aki_TMTPro18x_K_F1 73.881 67.444 11192 4626.1 15448 17243 25445 29445 18061 23559 19015 11889 21737 28933 19982 19052 25697 7426.4 24994 23310 10350 4346 15501 16500 25440 28675 18685 24147 19396 13162 22160 28222 20731 19364 25886 8602.6 23909 21978 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20224000 4558 2446 4328 8518 6937 6937 1 9606 Homo sapiens -0.0996035317677979 DNEGSWFR Unmodified 1009.4254 0.42535829 2044 A8K4I8;Q9BPW8;B4DQI7;H7C2U6;F8WCR5 NIPSNAP1 Protein NipSnap homolog 1 yes no 0 0 0 3 0 1 46.878 46.956 2 0.0025947 12749 20230619_1882_Aki_TMTPro18x_K_F3 124.23 85.992 376660 348260 393400 387780 379090 465400 426070 436630 582160 499900 512660 524690 560900 485440 462760 495730 544810 582850 348700 319060 398060 389550 396740 464040 431720 449650 581280 502840 531320 530030 566390 502710 476990 502820 520740 552530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 400720000 4559 2044 4329 8519 6938 6938 1 9606 Homo sapiens -0.0789773718147444 DNFALIPEGTNGIEER Unmodified 1773.8533 0.85334235 2811 O14531;D3DRG7;Q5T0Q6 DPYSL4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 3 0 1 57.288 57.32 3 0.013256 17349 20230619_1882_Aki_TMTPro18x_K_F3 60.528 45.967 29298 21157 27964 30673 25249 32071 30793 29044 37030 30053 31435 32380 35556 27864 28167 42517 41099 43868 27061 19455 28499 30200 26633 32234 30917 29920 37127 30407 32695 32640 35810 29680 29567 42513 39217 41642 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29396000 4560 2811 4330 8520 6939 6939 1 9606 Homo sapiens -0.0026301895800315833 DNFDEMDTSR Oxidation (M) 1244.4615 0.46154538 3493 P23258;A0A7P0T9G6 TUBG1 Tubulin gamma-1 chain yes no 0 1 0 1 0 1 35.602 35.602 2 0.00078689 8215 20230619_1880_Aki_TMTPro18x_K_F1 113.46 105.86 63944 47616 50356 61632 61589 74965 66162 64143 85979 78051 82646 85927 82628 67296 69593 82874 95101 83219 58990 43725 52534 61235 63329 74521 67033 66652 86316 78399 84952 86223 83720 70863 72471 83014 90663 79082 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115130000 4561 3493 4331 8521 6940 6940 2159 1 9606 Homo sapiens -0.15090692857597787 DNFGFIETANHDK Unmodified 1506.6739 0.67392142 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;E9PLT0;E9PNG3;A0A8I5KXL1;A0A8I5KYL8;Q9UG93 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 yes no 0 0 0 4 0.816 1 1 1 49.683 49.745 3 0.00010801 14023 20230619_1882_Aki_TMTPro18x_K_F3 98.58 84.323 368670 304160 329320 346310 394560 413470 398910 389760 510730 383910 347990 326440 368430 286100 368450 419710 415540 324650 340610 278830 338880 347240 404880 412580 405230 399600 507270 386840 365490 332850 375350 303540 377510 414170 396500 309700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 759080000 4562 88 4332 8522;8523;8524 6941 6941 1 9606 Homo sapiens -0.059148584552985994 DNFNFLHLNR Unmodified 1288.6313 0.63126874 573 A0A024R9G7;Q6PL18;A0A0B4J211 ATAD2 ATPase family AAA domain-containing protein 2 yes no 0 0 0 1.5 0.5 1 1 52.488 52.508 3 3.3321E-14 15375 20230619_1880_Aki_TMTPro18x_K_F1 235.66 201.7 29464 26220 24572 27313 18480 20907 19493 21882 29172 27775 26376 22680 30640 22456 23569 26634 24328 22383 27222 24011 25285 27424 19743 21667 19915 22450 29067 27607 27343 23256 30773 23408 24148 26454 23256 21311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36524000 4563 573 4333 8525;8526 6942 6942 1 9606 Homo sapiens -0.0015016400220702053 DNFQDTLQVVTAHYR Unmodified 1805.8697 0.86966111 615 B4DKB2;A0A024RAB0;A0A024RAB2;A1PUP8;A0A3B3ISF9;P42892-3;P42892-2;P42892-4;P42892 ECE1 Endothelin-converting enzyme 1 yes no 0 0 0 7.5 0.5 1 1 55.8 55.861 3 8.9692E-15 16133 20230619_1887_Aki_TMTPro18x_K_F7 155.57 130.72 26838 21846 24909 26616 25994 25144 25262 23868 39017 28013 28905 27789 31530 26613 26491 29315 30803 33518 24801 20041 25483 26471 26899 25523 25931 24595 38538 28115 30230 28184 31864 27645 27280 29643 29449 31781 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109670000 4564 615 4334 8527;8528 6943 6943 1 9606 Homo sapiens -0.0010389300125552836 DNFTAIPEGTNGVEER Unmodified 1747.8013 0.80130678 1217 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;H0YBT4 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 1.5 0.5 2 2 48.721 48.753 2;3 1.9807E-10 13852 20230619_1881_Aki_TMTPro18x_K_F2 148.52 132.89 53180 46075 49105 54835 54698 63007 54194 55808 68426 66006 58357 63740 71734 56591 58812 70569 67532 68907 49161 42248 50340 54761 56413 62929 55115 57777 68546 66107 60961 64547 72155 59374 60576 70564 64539 65460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155250000 4565 1217 4335 8529;8530;8531;8532 6944;6945 6945 2 9606 Homo sapiens -0.04268182371788498 DNFTLIPEGTNGTEER Unmodified 1791.8275 0.82752153 1284;4185 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q86U75 DPYSL2 Dihydropyrimidinase-related protein 2 no no 0 0 0 2.5 1.12 1 1 1 1 53.649 53.674 3 1.8564E-14 16018 20230619_1881_Aki_TMTPro18x_K_F2 174.95 165.76 111700 89927 120540 110900 109720 122890 124120 124850 139320 130430 140030 136910 136240 122420 136460 140000 139980 150100 103350 82511 121490 110480 115200 123400 124830 127560 141070 131720 143470 138220 139220 127670 138980 140970 133970 142420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 699350000 4566 1284;4185 4336 8533;8534;8535;8536 6946;6947;6948 6947 3 9606 Homo sapiens -0.03671913200309973 DNFTLIPEGVNGIEER Unmodified 1801.8846 0.88464248 3880;2441 B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 no no 0 0 0 3 0 1 61.117 61.146 3 4.306E-08 18874 20230619_1882_Aki_TMTPro18x_K_F3 126.63 115.8 35498 32540 40466 39405 26372 35027 32405 38621 38931 46579 45160 45445 44204 40782 46116 46985 43934 44827 32887 29837 40475 39191 28713 35826 32578 39410 39573 46591 46009 46020 45250 42533 46746 46999 42063 42596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 257370000 4567 2441;3880 4337 8537 6949 6949 1 9606 Homo sapiens 0.015775540760841977 DNFWEMGDTGPCGPCSEIHYDR Unmodified 2642.0261 0.026056469 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62;A0A6Q8PGI8 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 2 0 1 56.563 56.581 3 6.6434E-15 17224 20230619_1881_Aki_TMTPro18x_K_F2 152.88 149.08 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4568 1637 4338 8538 6950 6950 1 9606 Homo sapiens -0.2292755173752994 DNFWEMGDTGPCGPCSEIHYDR Oxidation (M) 2658.021 0.020971091 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62;A0A6Q8PGI8 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 1 0 3 0 1 52.53 52.589 3 0.00029886 15296 20230619_1882_Aki_TMTPro18x_K_F3 72.532 72.486 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4569 1637 4338 8539 6951 6951 1059 1 9606 Homo sapiens -0.24171855600116032 DNFYQHNVEK Unmodified 1292.5786 0.57856447 3816 Q0MQR4;Q86W56-3;Q86W56-2;Q86W56;B7Z1P8 PARG Poly(ADP-ribose) glycohydrolase yes no 0 0 0 4.5 0.5 1 1 39.881 39.923 3 0.00052585 9525 20230619_1883_Aki_TMTPro18x_K_F4 90.926 69.053 40400 30500 35778 43621 47221 46624 50144 50446 62729 46841 58815 47721 47902 39972 46545 53199 56466 53397 37303 28036 36948 42997 48205 47005 50759 51172 62955 47583 59968 48208 49177 42193 47939 53237 53909 50726 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22110000 4570 3816 4339 8540;8541 6952;6953 6952 2 9606 Homo sapiens -0.05602166855692303 DNGLLAKPTHGDIIR Unmodified 1618.8791 0.87910359 1194 A0A140VJQ4;P04181;P04181-2;Q59HE2 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes no 0 0 1 8 0 1 44.011 44.029 4 6.0489E-05 11114 20230619_1888_Aki_TMTPro18x_K_F8 101.15 82.418 27358 23727 30188 26167 26114 29817 27965 28562 38698 31824 30913 37575 33704 30718 41642 33742 33700 36342 25328 21741 30344 26294 27517 29852 28430 29353 38494 32177 32270 37622 34697 32063 41723 34034 32339 34480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40700000 4571 1194 4340 8542 6954 6954 1 9606 Homo sapiens 0.09441920074914378 DNHCMEVIR Oxidation (M) 1188.5016 0.50157648 837 Q4V339;Q9BRT8;C9J3G2;A0A0A0MRU4;A0A087X140;A0A0A6YYH9;Q5RIA9;Q5RIA9-3;A0A087WWG3;Q9BRT8-3;Q5RIB0;Q5JTY5-2;Q8IUF1;Q5JTY5;H0Y5V3;B7Z4F3;A0A087WU37;A0A0B4J2F1;Q9HAZ6;Q5JTY1;Q5RIB3;Q9BRT8-2;Q5RIA9-2;Q6ZV90;H0Y857 CBWD6;CBWD1;CBWD2;CBWD3;CBWD5;CBWD7 COBW domain-containing protein 6;COBW domain-containing protein 1;COBW domain-containing protein 5;COBW domain-containing protein 3;COBW domain-containing protein 2 yes no 0 1 0 2 0 1 28.043 28.118 3 0.0023264 5019 20230619_1881_Aki_TMTPro18x_K_F2 83.862 58.968 7665.3 1187.7 5897.1 6842.4 9904.4 5521.7 5764.2 7516.3 9098.2 8060.3 10310 9800.1 7733 6810.9 4406.1 9323.2 7355.4 9621.1 7038.5 1147.3 6193.9 6417.5 9828.9 5732.4 6161 7552.4 9125.4 8167 10395 9772.7 7818.8 7254.7 4730.8 9329.5 7024.8 9126.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6800600 4572 837 4341 8543 6955 6955 498 1 9606 Homo sapiens -0.08513424668035441 DNHLLGTFDLTGIPPAPR Unmodified 1933.0058 0.005760665 3429 V9HWB4;P11021;A0A7P0TAI0 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 7.5 0.5 1 1 59.714 59.755 3 4.527399999999999E-19 17624 20230619_1888_Aki_TMTPro18x_K_F8 187.39 168.37 21540 10882 15467 21188 20090 12360 22875 21848 27687 33191 28246 22101 33984 24699 22036 36591 19435 32915 19824 10065 16312 20421 20518 13400 23040 21968 27997 32587 29147 23057 33896 26049 22562 36325 18713 31253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 324160000 4573 3429 4342 8544;8545 6956 6956 1 9606 Homo sapiens 0.07657801509435558 DNHVVAAGGVEK Unmodified 1194.5993 0.59929991 3925 V9HWJ5;Q15274 HEL-S-90n;QPRT Nicotinate-nucleotide pyrophosphorylase [carboxylating] yes no 0 0 0 4 0 1 36.589 36.635 3 0.0015038 8157 20230619_1883_Aki_TMTPro18x_K_F4 82.925 64.149 53540 12910 37903 50994 52927 32207 53757 50885 91589 67489 85105 96340 94511 83587 45348 67621 61633 98508 49170 12213 40079 48048 53714 34421 55277 51181 90807 68242 88011 95978 93837 85813 48013 69882 59068 93101 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64543000 4574 3925 4343 8546 6957 6957 1 9606 Homo sapiens 0.009784235239976624 DNICGALAR Unmodified 988.47601 0.47601365 2382 Q8TEX9-2;Q8TEX9;B3KQ33;Q59FI4;B3KPS9;B3KT38;B3KTB3;D3DS63;Q59H62;B3KSQ4;Q6I9Y8;B3KPY9;B4DXR7;H0YMR4;H0YN07 IPO4 Importin-4 yes no 0 0 0 5.5 0.5 1 1 41.336 41.426 2 0.012724 10154 20230619_1885_Aki_TMTPro18x_K_F5 80.219 41.256 71647 58462 71600 72718 73256 84249 81342 83218 92316 89792 86470 87389 94994 71055 75185 100390 101380 92688 66249 53642 72777 72428 76209 84284 81898 85243 93220 90313 89354 88290 95704 75423 78383 99897 96687 88149 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71690000 4575 2382 4344 8547;8548 6958 6958 1 9606 Homo sapiens -0.018685311281274153 DNILPELGVR Unmodified 1124.619 0.61897272 2568 B4DPV7;P49589-3;A8K067;B4DKY1;A0A024RCG3;P49589-2;P49589;A8MVQ3;B4DI19;Q53HG6 CARS Cysteine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0 1 56.521 56.582 2 0.0063973 16492 20230619_1885_Aki_TMTPro18x_K_F5 85.622 41.011 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4576 2568 4345 8549 6959 6959 1 9606 Homo sapiens 0.06164799534758458 DNIQAMVIVPTR Oxidation (M) 1371.718 0.71803484 2256 P26196;B2R858;Q8IV96 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 1 0 6 0 1 47.511 47.592 2 0.062629 12871 20230619_1886_Aki_TMTPro18x_K_F6 57.348 44.311 22274 18442 21557 24864 25116 23215 23446 23853 28253 31088 25954 29554 31873 25041 22421 31720 34605 28939 20592 16935 22024 24555 25734 23626 23889 24520 28459 30977 27009 29899 31893 26340 23685 31586 32953 27536 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27055000 4577 2256 4346 8550 6960 6960 1400 1 9606 Homo sapiens 0.04704454437342065 DNIQGITK Unmodified 887.47125 0.47124585 2211 B2R4R0;P62805;Q0VAS5 HIST1H4H;HIST1H4A Histone H4 yes no 0 0 0 5.78 1.31 2 2 2 2 1 43.925 43.993 2;3 0.00033334 11159 20230619_1885_Aki_TMTPro18x_K_F5 147.2 88.219 1048900 609370 978540 1020400 1199700 1557900 1168900 1316300 1741400 984420 1272500 1728000 1938600 1731900 1115500 1022800 2262500 2254700 967590 561940 1003800 1002900 1231000 1527400 1197900 1352100 1720800 1037400 1358800 1718500 1920300 1750100 1211200 1108600 2153600 2128500 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 70490000000 4578 2211 4347 8551;8552;8553;8554;8555;8556;8557;8558;8559 6961;6962;6963;6964;6965 6962 5 9606 Homo sapiens 0.023009080007568627 DNIQGITKPAIR Unmodified 1324.7463 0.7462985 2211 B2R4R0;P62805;Q0VAS5 HIST1H4H;HIST1H4A Histone H4 yes no 0 0 1 3.1 2.02 2 3 2 1 1 1 56.456 56.516 3 4.6258E-08 11528 20230619_1888_Aki_TMTPro18x_K_F8 168.76 145.33 8553700 7896300 8878600 8204200 8958000 8740400 9664600 9021800 6934700 8411700 9380700 5398800 5569000 3591900 10422000 2499000 2888000 1235200 7918100 7230100 8988000 8274500 9298700 8811200 9624100 9181000 7319000 8434400 9326100 5558700 6015200 3713000 10053000 2486700 2824600 1192600 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 135300000000 4579 2211 4348 8560;8561;8562;8563;8564;8565;8566;8567;8568;8569 6966;6967;6968;6969;6970;6971;6972 6972 7 9606 Homo sapiens 0.09691520408932774 DNITNNTAAATVR Unmodified 1359.6743 0.67425577 1336 B7ZM73;A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;F8VZV1;Q6P148;B3KW06 MON2 Protein MON2 homolog yes no 0 0 0 5 0 1 37.784 37.876 2 2.394E-10 8633 20230619_1885_Aki_TMTPro18x_K_F5 175.74 151.36 27938 21930 22406 21703 27412 25692 27780 31573 37378 30315 35142 37544 35882 29197 26531 39668 44906 39052 25784 20084 23286 22016 28081 25834 28288 31795 37421 30925 36192 37515 36168 30944 28227 39618 42748 37120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18464000 4580 1336 4349 8570 6973 6973 1 9606 Homo sapiens 0.008805612645574001 DNKPLVER Unmodified 969.52434 0.52434406 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;Q96K98;Q96K97;Q9UHB9-3 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 1 5 0 1 35.406 35.496 3 0.069259 7751 20230619_1885_Aki_TMTPro18x_K_F5 52.49 30.404 249480 132330 249070 317660 359900 363300 327960 327160 384170 326870 415340 396370 396800 342490 353360 208380 438870 352110 230180 122810 255110 305670 363990 362800 334220 336770 389190 332600 423680 397090 403540 348150 363920 220170 418480 333230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216830000 4581 4661 4350 8571 6974 6974 1 9606 Homo sapiens 0.038362857834158604 DNLAEDIMR Oxidation (M) 1091.4917 0.4917233 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8 VIM;HEL113 Vimentin yes no 0 1 0 1.5 0.5 1 1 43.517 43.558 2 0.076155 11613 20230619_1880_Aki_TMTPro18x_K_F1 59.013 36.927 199880 130810 140440 165510 357870 444410 263640 249460 424620 259040 299870 346860 326040 297990 267770 319070 318080 368200 184140 120150 151130 167670 352870 423520 275860 268380 418070 264560 314880 346380 329400 310020 276380 322910 304200 349020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 722660000 4582 3414 4351 8572;8573 6975 6975 2026 1 9606 Homo sapiens -0.05036289401732574 DNLAEDIMR Unmodified 1075.4968 0.49680868 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8 VIM;HEL113 Vimentin yes no 0 0 0 2 0.816 1 1 1 51.708 51.742 2 0.00074938 15192 20230619_1881_Aki_TMTPro18x_K_F2 124.74 100.77 868740 574400 657180 659890 1080400 1839500 1082300 1073200 1820800 1362300 1266200 1552700 1633500 1488100 1190300 1657000 1507000 1861800 800720 527110 692620 674140 1096000 1751000 1112600 1155700 1790300 1369400 1342500 1564600 1635700 1545900 1238400 1672400 1441300 1764900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2603400000 4583 3414 4351 8574;8575;8576 6976;6977 6976 2 9606 Homo sapiens -0.037919855391237434 DNLAEELEGVAGR Unmodified 1371.663 0.66302238 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 3 0 1 58.623 58.654 3 0.0018012 17859 20230619_1882_Aki_TMTPro18x_K_F3 74.789 56.009 16662 11753 14634 14681 12657 18656 14513 16157 21318 16433 18596 16895 18975 15024 16482 20457 18628 22785 15378 10791 15010 14638 13410 18492 14742 16679 21204 16620 19207 17084 19231 15857 16946 20585 17832 21602 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2639100 4584 2830 4352 8577 6978 6978 1 9606 Homo sapiens -0.007942608295934406 DNLAQQSFNMEQANYTIQSLK Oxidation (M) 2458.1435 0.14345271 4635 Q9NZZ3;Q9NZZ3-2 CHMP5 Charged multivesicular body protein 5 yes no 0 1 0 7 0 1 59.303 59.353 3 9.9438E-09 17543 20230619_1887_Aki_TMTPro18x_K_F7 117.48 109.86 30358 24787 31357 31946 31298 26343 34624 27748 34991 35822 35398 35896 38010 29966 36329 40552 32595 37622 28079 22752 31764 31605 32527 27123 34722 28500 35659 35769 36424 36238 38607 31673 36792 40405 31258 35746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326560000 4585 4635 4353 8578 6979 6979 2838 1 9606 Homo sapiens -0.027293275347346935 DNLEFFLAGIGR Unmodified 1350.6932 0.6932003 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 7.67 0.471 1 2 64.353 64.377 2 1.6481E-09 19666 20230619_1888_Aki_TMTPro18x_K_F8 184.9 160.06 592200 444540 519230 477400 345320 475320 445850 415780 677390 640830 578360 624480 553870 765060 384800 619810 296310 709690 546750 407460 530670 479710 376560 479480 451010 435070 673020 635670 596940 638950 559830 775730 390910 629680 287230 671600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 680080000 4586 3606 4354 8579;8580;8581 6980;6981 6981 2 9606 Homo sapiens 0.03188142626277113 DNLEWLAR Unmodified 1015.5087 0.50869399 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 4 0 1 54.145 54.161 2 0.012899 15843 20230619_1883_Aki_TMTPro18x_K_F4 95.358 68.228 277720 259750 301570 298430 279610 348230 297350 322470 439960 374390 338730 325930 375380 279700 315400 379790 355610 376180 257220 238030 304040 298950 293170 347720 303260 332460 436060 374290 353720 331540 378910 295580 324360 379630 340000 357260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292460000 4587 832 4355 8582 6982 6982 1 9606 Homo sapiens 0.001559992663715093 DNLHQVSK Unmodified 939.47739 0.47739386 620 Q9UKD2;A0A024RAE1 MRTO4;C1orf33 mRNA turnover protein 4 homolog yes no 0 0 0 5.5 0.5 1 1 34.129 34.195 3 0.054377 7341 20230619_1886_Aki_TMTPro18x_K_F6 44.57 26.234 23363 12497 23670 23144 35641 37016 27161 32402 29204 22834 33779 36454 24378 26345 28832 18613 36185 31796 21559 11546 24191 22661 35827 36252 27960 33143 29786 24005 34056 36024 25433 27083 29586 19605 34520 30076 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56630000 4588 620 4356 8583;8584 6983 6983 1 9606 Homo sapiens 0.005234262322915129 DNLIVPILEEEVQNSVSGESEA Unmodified 2370.1438 0.14382987 4826 S4R3N1;B4DM50;A8K012;A0A024R3X9;Q9Y3A3-2;Q9Y3A3-3;Q9Y3A3 HSPE1-MOB4;MOB4;PREI3 MOB-like protein phocein yes no 0 0 0 2 0.816 1 1 1 67.36 67.376 3 0.00061819 21736 20230619_1881_Aki_TMTPro18x_K_F2 71.592 62.992 5126.3 4726.5 6002.1 5282.1 4757.2 7496.7 6444.8 7696.6 7760.3 7130.1 7138 7885.9 8540.1 7027.4 5363.6 7275.3 9135 9950 4750.6 4330.5 6004.8 5321.9 5101.9 7411.1 6445.3 7826.8 7805.6 7259.1 7414.9 7939.2 8523 7296.1 5728.4 7450.3 8709.5 9419.3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 14507000 4589 4826 4357 8585;8586;8587 6984;6985 6984 2 9606 Homo sapiens 0.01356370666053408 DNLLLDMYLAPHVR Oxidation (M) 1684.8607 0.86067633 2750 Q13098-7;Q13098;Q13098-5;C9JFE4;A8K070;A0A096LPJ3;A0A096LP07;B4DND6;Q13098-6 GPS1 COP9 signalosome complex subunit 1 yes no 0 1 0 7 0 1 58.417 58.47 3 7.4998E-07 17154 20230619_1887_Aki_TMTPro18x_K_F7 125.73 95.704 29866 24554 27136 29250 29020 30930 28490 29115 39365 30119 28840 31137 38417 25180 30201 34465 30854 32420 27596 22520 27829 29179 29998 31115 29091 29899 39059 30435 30512 31361 38466 26692 30914 34358 29525 30809 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69767000 4590 2750 4358 8588 6986 6986 1643 1 9606 Homo sapiens 0.045640421087000504 DNLLLDMYLAPHVR Unmodified 1668.8658 0.86576171 2750 Q13098-7;Q13098;Q13098-5;C9JFE4;A8K070;A0A096LPJ3;A0A096LP07;B4DND6;Q13098-6 GPS1 COP9 signalosome complex subunit 1 yes no 0 0 0 8 0 1 62.009 62.037 3 2.1753E-22 18629 20230619_1888_Aki_TMTPro18x_K_F8 185.66 165.56 51737 39270 48608 49706 42914 48714 52775 45691 58579 53257 52293 52847 56008 53697 56827 60298 62800 65482 47794 36049 49562 49330 45309 49267 52812 47122 59091 53432 54131 53703 57136 55697 58120 60769 60048 62131 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112310000 4591 2750 4358 8589 6987 6987 1 9606 Homo sapiens 0.058083459713088814 DNLPLQENVTIQK Unmodified 1510.7991 0.79912193 1250 A8K3S3;A0A140VKF1;Q99661-2;Q99661;Q5JR89;Q5JR91;B7Z6Q6 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C yes no 0 0 0 6 0 1 53.752 53.829 3 4.3792E-05 15555 20230619_1886_Aki_TMTPro18x_K_F6 113.34 90.46 52380 39855 48338 48578 37322 53466 51064 47216 61409 56644 59528 48056 60584 45099 50538 61302 62269 56958 48382 36572 49291 48411 40127 53523 51014 48930 61875 56503 61119 49130 61289 47511 52272 61065 59428 54165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215390000 4592 1250 4359 8590 6988 6988 1 9606 Homo sapiens 0.06415433681081595 DNLPPFPASVK Unmodified 1183.6237 0.62372375 2679 B7Z4J7;F5H039;B7Z2B5;Q9NQX3;Q9NQX3-2;B7Z374;B2RDJ7 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 8 0 1 55.479 55.542 3 0.01703 15926 20230619_1888_Aki_TMTPro18x_K_F8 62.891 47.919 79440 63550 72638 78303 64752 71682 80058 76413 81261 83357 87116 79512 87576 69705 92519 92688 85131 92602 73393 58309 74270 77791 68295 73105 79889 77950 82958 83738 89104 80611 89553 73473 93590 92766 81576 87928 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18693000 4593 2679 4360 8591 6989 6989 1 9606 Homo sapiens 0.039256836774939075 DNLTLWTSDMQGDGEEQNK Unmodified 2179.9328 0.93279124 3709 V9HW98;P62258;P62258-2;B7ZA86 HEL2;YWHAE 14-3-3 protein epsilon yes no 0 0 0 3 1.29 1 1 2 1 1 59.715 59.736 3;4 3.6055E-49 18490 20230619_1881_Aki_TMTPro18x_K_F2 268.82 262.04 275850 230090 267360 259010 219440 295480 262020 261600 284250 324610 317370 328690 345900 308150 315910 349630 324590 375220 255030 210900 271580 259770 233310 295190 262570 271270 289870 324780 325410 332740 350760 320730 322450 352030 310830 355930 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1665999999.9999998 4594 3709 4361 8592;8593;8594;8595;8596;8597 6990;6991;6992;6993;6994;6995 6991 6 9606 Homo sapiens -0.10997784856863291 DNLTLWTSDMQGDGEEQNK Oxidation (M) 2195.9277 0.92770586 3709 V9HW98;P62258;P62258-2;B7ZA86 HEL2;YWHAE 14-3-3 protein epsilon yes no 0 1 0 3 1 1 1 55.558 55.574 3 1.021E-14 16792 20230619_1881_Aki_TMTPro18x_K_F2 154.48 145.69 112330 98522 104060 111390 115670 112600 112430 122000 117410 136370 138910 137740 148450 131300 143450 154930 143890 154660 103850 90292 106590 111500 119030 114060 113770 124340 120310 137040 141950 139590 150990 136890 146050 155270 137740 146860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 402110000 4595 3709 4361 8598;8599 6996;6997;6998 6996 2392 3 9606 Homo sapiens -0.12242088719449384 DNLTLWTSDQQDDDGGEGNN Unmodified 2192.873 0.87302775 3701 P61981;B3KNB4;B4DE78;B4DHC4 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes no 0 0 0 1 0 1 61.73 61.73 2 2.326E-07 19146 20230619_1880_Aki_TMTPro18x_K_F1 108.17 100.45 37884 33453 38278 33739 32504 36268 37325 37953 34645 46858 40194 45308 48826 40058 46886 48727 48811 50311 35051 30627 38735 34121 34336 36542 37300 38886 35745 46801 41406 45862 49454 41966 47826 48911 46694 47763 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171400000 4596 3701 4362 8600 6999 6999 1 9606 Homo sapiens -0.17569384266562338 DNLTLWTSDQQDEEAGEGN Unmodified 2120.8771 0.8770505 145 A0A024R1K7;Q04917;B2R6N6;Q9H4N8 YWHAH 14-3-3 protein eta yes no 0 0 0 1 0 1 61.829 61.829 2 1.6751999999999999E-19 19220 20230619_1880_Aki_TMTPro18x_K_F1 189.3 175.33 41027 38367 47551 49429 35362 43565 44549 49174 52220 60916 58394 51637 60523 52358 52673 60561 62250 59651 38020 35200 47592 48941 37967 44617 44665 50153 53053 60635 59662 52884 61339 54427 54270 60656 59450 56676 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85790000 4597 145 4363 8601 7000 7000 1 9606 Homo sapiens -0.1385529477279306 DNLTLWTSDTQGDEAEAGEGGEN Unmodified 2407.9888 0.98878579 2805 D0PNI1;P63104;B0AZS6;P63104-2;B7Z2E6;H0YB80;Q2F831 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 0 1.5 0.5 1 1 62.04 62.045 2 1.4060000000000002E-25 19299 20230619_1880_Aki_TMTPro18x_K_F1 179.79 177.08 69010 67130 73935 71521 60437 69940 70418 74726 76035 97318 90973 92574 100430 85443 90201 107660 102670 112610 63925 61469 74477 71901 64121 70982 70660 76599 77852 96950 93063 93952 101720 89568 92691 108050 98184 106870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 443830000 4598 2805 4364 8602;8603 7001 7001 1 9606 Homo sapiens -0.15888905206293202 DNLTLWTSENQGDEGDAGEGEN Unmodified 2349.9469 0.94692097 3535 V9HWD6;P31946-2;P31946;B5BU24 HEL-S-1;YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 0 0 1 0 1 61.471 61.471 3 2.5908E-08 19045 20230619_1880_Aki_TMTPro18x_K_F1 106.73 106.73 63287 53445 60708 65267 63512 73989 71492 74517 74619 84314 83809 87560 84648 70208 86759 99508 88432 97371 58511 49023 61962 65062 65989 74160 71741 76334 76262 84746 85640 88167 86452 74547 88354 99362 84656 92474 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 697820000 4599 3535 4365 8604 7002 7002 1 9606 Homo sapiens -0.1740546089486088 DNMALQR Unmodified 846.40179 0.40178608 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;Q2F839 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 3 0.816 1 1 1 35.13 35.184 2 0.0070992 7628 20230619_1882_Aki_TMTPro18x_K_F3 127.84 62.978 314150 190120 321430 307320 399650 462200 356740 385830 508840 296340 351980 332580 332340 282890 376370 190780 399530 310200 290070 175200 327020 302580 408210 453570 366840 396850 502800 305880 367600 334130 341980 288760 382120 200540 381430 293690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 375130000 4600 1488 4366 8605;8606;8607 7003;7004 7003 2 9606 Homo sapiens -0.027558742196447383 DNMALQR Oxidation (M) 862.3967 0.3967007 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;Q2F839 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 1 0 3.5 0.5 1 1 29.636 29.718 2 0.028974 5557 20230619_1883_Aki_TMTPro18x_K_F4 91.626 52.408 33737 16818 35107 36935 42726 44413 36251 41100 52373 32175 34090 38458 36527 30140 40700 21825 43012 38940 31130 15588 35667 35706 43609 44232 37428 41967 51662 33223 35984 38431 37405 30955 41329 23088 41103 36819 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27074000 4601 1488 4366 8608;8609 7005 7005 994 1 9606 Homo sapiens -0.04000178082253569 DNNELLLFILK Unmodified 1330.7497 0.74965254 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5;Q9BWF4 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 8 0 1 65.571 65.59 3 0.0012736 20218 20230619_1888_Aki_TMTPro18x_K_F8 88.187 50.995 21278 17083 18844 19073 17577 17991 19886 17480 21501 18290 18366 16368 20104 16017 23570 21234 19160 19190 19654 15660 19324 19093 18414 18275 19965 17927 21682 18392 19067 16708 20617 16814 23650 21148 18375 18248 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43082000 4602 2702 4367 8610 7006 7006 1 9606 Homo sapiens 0.09750770462937908 DNNLLGK Unmodified 772.40792 0.40791731 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;P11142-2;Q53HF2;B4E1Q1;A8K7Q2;Q96BE0;E9PS65;P54652;A0A024R6B5;A0A384MDT7;Q96H53;E9PM13;B3KUS2;A4D110 HSPA8;HEL-S-72p;HSPA2;LOC401309 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 0 0 0 6 1.22 1 2 2 2 1 45.526 45.599 2;3 0.0073877 11896 20230619_1886_Aki_TMTPro18x_K_F6 133.79 66.992 1799300 836500 1665600 1822400 2114600 2328400 1972500 2113100 2327300 1893400 2450500 2256600 2584300 2145800 2120500 1422600 2831400 2257500 1658300 775560 1710700 1764000 2157900 2309100 2008500 2167200 2354100 1937500 2512500 2270000 2611200 2180300 2199200 1490700 2698200 2137400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5488500000 4603 3430 4368 8611;8612;8613;8614;8615;8616;8617;8618 7007;7008 7008 2 9606 Homo sapiens 0.012609672835196761 DNNLLGR Unmodified 800.41407 0.41406533 1031;1463 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNX1;B4E1T6;Q53FC7;B3KSM6;B2R6X5;A0A384NKX5;P17066;B4DHP5 HSPA1A;HSPA1B;HEL-S-103;HSPA6 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 6 no no 0 0 0 4 0.816 1 1 1 38.494 38.557 2 0.050909 8949 20230619_1883_Aki_TMTPro18x_K_F4 85.813 63.682 662220 492520 654350 807290 902510 998770 893160 894030 1248000 923110 1033800 946790 1088100 877340 818160 1043300 1297800 1031400 611930 453540 670140 791140 918180 992500 911560 921240 1241800 932990 1072100 958340 1096300 916300 864280 1044400 1235300 980780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 718830000 4604 1031;1463 4369 8619;8620;8621 7009;7010 7009 2 9606 Homo sapiens 0.00587485515040953 DNNMAPYYEALCK Oxidation (M) 1603.6647 0.66467864 3908 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 1 0 5 0 1 52.016 52.09 3 7.7482E-05 14621 20230619_1885_Aki_TMTPro18x_K_F5 101.2 89.763 51154 40744 49003 54250 57656 57280 61551 55407 61679 65139 65662 67141 71724 62048 59609 75509 74370 83014 47276 37415 50117 53706 59246 57662 61827 57015 63025 65369 67454 67906 72453 64895 61733 76031 71074 78736 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101260000 4605 3908 4370 8622 7011 7011 2583 1 9606 Homo sapiens -0.11300711127501017 DNNMAPYYEALCK Unmodified 1587.6698 0.66976402 3908 Q15008 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 0 6 0 1 56.705 56.777 3 0.00065809 16735 20230619_1886_Aki_TMTPro18x_K_F6 89.911 78.471 140060 108030 125270 142760 120710 148150 146810 144960 175050 151650 138420 140830 163360 139990 157310 168750 154750 162950 129350 99206 128550 141360 126630 149270 147360 148510 175260 152640 144880 143460 165670 145960 159990 168770 148150 154800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85243000 4606 3908 4370 8623 7012;7013 7012 2 9606 Homo sapiens -0.10056407264869449 DNNQFASASLDR Unmodified 1336.6008 0.60075648 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258;B4E2C9;A0A7I2V3G0;A0A7I2YQF9;D6R997 COPB2 Coatomer subunit beta' yes no 0 0 0 3 0.816 1 1 1 41.685 41.746 2 7.5287E-13 10325 20230619_1882_Aki_TMTPro18x_K_F3 239.16 205.07 235690 169780 208580 236810 250330 277080 271740 259340 319460 297760 315180 300010 332850 266870 261130 358850 343670 328650 217570 156060 214960 234080 257410 276660 274150 267200 322550 299010 324160 303520 335710 281280 271890 357140 327920 312530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 510880000 4607 3031 4371 8624;8625;8626 7014;7015;7016 7015 3 9606 Homo sapiens -0.0540798717790949 DNPDLGTAFVK Unmodified 1175.5823 0.58225287 935 A0A0A0MRE5;Q9ULH1;Q9ULH1-2 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 4 0 1 52.823 52.846 3 0.0041279 15283 20230619_1883_Aki_TMTPro18x_K_F4 82.85 65.415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4608 935 4372 8627 7017 7017 1 9606 Homo sapiens 0.0014850291818220285 DNPGVVTCLDEAR Unmodified 1444.6616 0.66164217 134 A0A024R1A3;P22314-2;P22314;Q5JRR9;Q5JRS0 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 2 0.816 1 1 1 46.028 46.08 2 6.15E-17 12589 20230619_1881_Aki_TMTPro18x_K_F2 218.4 197.56 623100 537010 553450 649240 598900 652180 673480 642090 685390 765990 832910 852510 844160 697000 777690 886080 867430 908580 575820 492500 569290 646440 620460 659160 675180 660200 703770 769870 848290 856320 857880 734180 797550 888330 829370 862590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1254400000 4609 134 4373 8628;8629;8630 7018;7019;7020 7019 3 9606 Homo sapiens -0.04290218189976258 DNPKPNVSEALR Unmodified 1338.6892 0.68917755 3762 P82909 MRPS36 28S ribosomal protein S36, mitochondrial yes yes 0 0 1 6.5 0.5 1 1 41.139 41.222 3 0.0024182 9756 20230619_1887_Aki_TMTPro18x_K_F7 79.885 55.504 95189 77868 92946 106510 120790 130450 126420 121720 143190 115080 111430 80753 101080 81652 93899 99869 103650 69484 88002 71520 95120 105480 123400 129870 127590 124750 143590 115690 115160 83673 103140 85166 96169 98373 98843 66443 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186340000 4610 3762 4374 8631;8632 7021 7021 1 9606 Homo sapiens 0.03338053132574714 DNPLDPVLAK Unmodified 1080.5815 0.58152458 4323 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 5.2 0.748 1 2 2 55.607 55.665 2;3 0.00014358 16314 20230619_1886_Aki_TMTPro18x_K_F6 140.78 111.63 219300 178110 205820 225140 206030 226810 249790 254310 293820 275540 275700 260040 310520 249820 245590 325210 319730 322870 202670 163450 210350 223560 215230 229850 250670 258430 296110 276880 285070 264530 312720 262120 255400 325210 305230 306670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 523600000 4611 4323 4375 8633;8634;8635;8636;8637 7022;7023;7024 7024 3 9606 Homo sapiens 0.04445708269122406 DNPLNEGTDAAR Unmodified 1271.5742 0.57420737 4025;2667 B5MCD7;O43759-2;O43759;O43759-3;Q59FT7 SYNGR1 Synaptogyrin-1 no no 0 0 0 1 0 1 38.897 38.897 2 7.6554E-24 9604 20230619_1880_Aki_TMTPro18x_K_F1 256.92 212.09 43930 37698 40278 43654 40462 38646 48407 48947 60973 55036 66142 65254 59346 54644 54066 65014 74155 61681 40605 34560 41239 43554 42204 39723 48739 49462 61564 55604 67304 65439 60582 57230 56235 64954 70671 58666 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53635000 4612 2667;4025 4376 8638 7025 7025 1 9606 Homo sapiens -0.050716760692239404 DNPNLLFNMCGFECR Oxidation (M) 1901.7859 0.78587318 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 1 0 5.5 0.5 1 1 57.274 57.34 3 0.00051362 17014 20230619_1886_Aki_TMTPro18x_K_F6 81.822 76.107 33134 27513 32855 37944 29332 26152 29147 31654 29427 56024 63149 67345 80299 65474 46630 71928 70453 100840 30639 25271 33360 37303 30688 27488 29463 32625 31419 55609 63937 67784 79788 68003 49472 73703 67389 95356 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106590000 4613 1863 4377 8639;8640 7026 7026 1190 1 9606 Homo sapiens -0.1289483175648911 DNPNQYHYVA Unmodified 1219.5258 0.52580062 3864 Q13619;B2RBV7;A0A0A0MR50;Q13619-2;B4DKT2 CUL4A Cullin-4A yes no 0 0 0 3 0 1 39.304 39.358 2 0.086382 9347 20230619_1882_Aki_TMTPro18x_K_F3 59.35 49.345 13516 9616 11808 12470 15777 20278 14904 16168 21539 18084 20013 22994 19740 17205 16217 21100 25351 23037 12475 8831.9 12205 12456 16090 19807 15281 16842 21496 18331 20606 22915 20002 18141 17082 21234 24151 21869 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27205000 4614 3864 4378 8641 7027 7027 1 9606 Homo sapiens -0.07518124918487956 DNPPNIPSSSSKPK Unmodified 1466.7365 0.73652168 878 E7EVY0;A0A384NLA7;A0A087X0L7;J3KNA0;Q15070-2;Q15070 OXA1L Mitochondrial inner membrane protein OXA1L yes no 0 0 1 8 0 1 40.396 40.388 3 1.5714E-06 9632 20230619_1888_Aki_TMTPro18x_K_F8 121.92 109.13 67588 46989 56129 77791 89767 88650 85317 81788 106520 86665 115600 98890 85809 71978 107640 71588 86977 68889 62351 43287 58605 76086 90434 88643 86893 84176 107550 87727 116790 98939 89511 75099 107730 71937 83294 65526 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77022000 4615 878 4379 8642 7028 7028 1 9606 Homo sapiens 0.02182287612890832 DNPQTHYYAVAVVK Unmodified 1603.7995 0.79945628 2791 CON__Q0IIK2;CON__Q29443 yes no 0 0 0 8 0 1 46.126 46.165 3 1.5458E-08 11948 20230619_1888_Aki_TMTPro18x_K_F8 146 121.21 + 51597 38570 45714 39448 80422 98959 42835 43055 65436 38597 47701 60185 56269 47065 52388 53619 55551 68556 47640 35339 47404 40518 79936 94250 46065 47703 64643 40016 50234 59654 56978 49338 53524 54606 53210 64909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87863000 4616 2791 4380 8643 7029 7029 1 0.02170853400912165 DNQFLAR Unmodified 862.42972 0.42971539 2147 A8KA74;P78316 NOP14 Nucleolar protein 14 yes no 0 0 0 5 0 1 39.893 39.983 2 0.017461 9509 20230619_1885_Aki_TMTPro18x_K_F5 97.093 47.444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4617 2147 4381 8644 7030 7030 1 9606 Homo sapiens -0.007002279679227286 DNQLSEVANK Unmodified 1116.5411 0.54111633 3905 Q14978-3;B2RAU8;A0A0A0MRM9;Q14978;Q14978-2;S4R349;S4R341;S4R402 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 0 0 0 3.5 0.5 1 1 44.036 44.093 2 1.0503999999999998E-46 11310 20230619_1883_Aki_TMTPro18x_K_F4 338.72 280.01 323380 194330 292530 338970 343150 382700 334910 337140 426400 394840 463180 453540 489900 396660 398110 329070 507780 472530 298290 179280 300760 330690 352470 382400 341030 349160 430580 397860 474460 455580 494680 407780 412060 340080 484540 447420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 254470000 4618 3905 4382 8645;8646 7031;7032 7032 2 9606 Homo sapiens -0.012492581212882214 DNQNFCVPCYEK Unmodified 1572.6337 0.63371286 3098 Q53T40;I0CE67;Q6I9R8;Q2TSB7;Q2XQU9;Q14192 FHL2;AAG11 Four and a half LIM domains protein 2 yes no 0 0 0 5.5 0.5 1 1 50.554 50.63 3 0.008435 14027 20230619_1885_Aki_TMTPro18x_K_F5 68.277 58.489 128400 118860 135720 152360 154110 201710 162320 173650 192670 181810 175760 171880 191920 161050 173360 197290 188440 199850 118880 109050 137690 151710 159110 199470 164140 179480 193930 183050 181810 174620 194490 168440 177580 197750 180230 189750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122070000 4619 3098 4383 8647;8648 7033;7034 7033 2 9606 Homo sapiens -0.12969864441720347 DNRPENFR Unmodified 1046.4894 0.48935553 723 Q59HG5;A0A024RCK7;Q15776 ZNF192;ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 yes no 0 0 1 3.5 0.5 1 1 28.251 28.342 3 0.015226 4999 20230619_1882_Aki_TMTPro18x_K_F3 62.969 30.128 15112 16683 16630 16700 22717 20663 18078 18092 20821 18354 18825 22806 18989 17799 22633 15953 28540 22682 14016 15262 16852 16925 22954 20557 18583 18668 20982 18674 19454 22754 19570 18428 23235 16461 27209 21493 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14185000 4620 723 4384 8649;8650 7035 7035 1 9606 Homo sapiens -0.0320295702454132 DNSDFDLLTVSETANEPPQDEGNSFNSPR Unmodified 3194.3912 0.3912238 3242 O15371-2;O15371-3;O15371;B4E1K8 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 0 1 0 1 61.742 61.742 3 2.1735E-61 19207 20230619_1880_Aki_TMTPro18x_K_F1 243.19 236.9 6792.5 6645.6 7189.2 7563.9 7956.2 5726.5 9522.3 7850.3 7439.7 9609.2 9521 4876.5 9666 7391.1 7166.5 7378.4 6801.7 7833.5 6291.6 6088.7 7281.8 7544.3 8211.8 5990.3 9443.8 7923.6 7789.6 9469.8 9644 5264 9732 7551.5 7312.8 7440.3 6518.5 7431.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25820000 4621 3242 4385 8651 7036 7036 1 9606 Homo sapiens -0.11819616714728909 DNSEEFR Unmodified 895.36717 0.36717471 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;A0A024QZ91;A0A024QZC0;Q8WWM7-7;H3BSK9 ATXN2L Ataxin-2-like protein yes no 0 0 0 1 0 1 32.885 32.885 2 0.004865 7140 20230619_1880_Aki_TMTPro18x_K_F1 145.34 117.23 49500 25595 54143 64698 87222 90728 61979 78181 87506 54127 81632 93318 58765 66201 79423 28491 85692 89428 45702 23781 55162 62359 87298 89402 64774 80054 87326 57231 83134 91915 61798 67181 80456 32820 81954 84279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66270000 4622 4285 4386 8652 7037 7037 1 9606 Homo sapiens -0.08469418826757646 DNSHPFVGLAFK Unmodified 1330.667 0.66698555 2867;2868 E5KND5;Q96RP9;Q96RP9-2;C9IZ01;D3DNL3;F8WAU4;Q9H9M0;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 0 1.5 0.5 1 1 53.439 53.454 3 1.7472E-05 15757 20230619_1880_Aki_TMTPro18x_K_F1 127.02 97.082 219080 181760 203770 226140 210500 238180 242300 261550 293250 259310 245910 250410 276530 218210 262040 305980 270170 276470 202480 166770 208530 224910 219110 240440 244050 265440 293960 261930 255930 253630 280480 230840 267410 304280 258460 262880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 282230000 4623 2867;2868 4387 8653;8654 7038;7039 7038 2 9606 Homo sapiens 0.014878734547892236 DNSTMGYMAAK 2 Oxidation (M) 1219.4849 0.48492336 3177 K9JA46;P07900;P07900-2;Q8TBA7;O75322;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 2 0 5.22 1.13 1 1 3 3 1 37.255 37.328 2;3 0.0014219 8678 20230619_1885_Aki_TMTPro18x_K_F5 81.625 76.331 264980 183480 247120 279510 363380 331950 299720 318030 370470 295080 384790 348220 348120 294870 346090 328170 367640 340500 244650 168850 254360 274920 366140 331420 308110 325190 373690 301190 392270 349510 356340 307670 353040 330040 351360 323380 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 1092000000 4624 3177 4388 8655;8656;8657;8658;8659;8660;8661;8662;8663 7040;7041;7042;7043;7044;7045;7046 7043 1840;1841 7 9606 Homo sapiens -0.11603970344617665 DNSTMGYMAAK Oxidation (M) 1203.49 0.49000874 3177 K9JA46;P07900;P07900-2;Q8TBA7;O75322;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 1 0 5.75 1.01 2 2 5 3 41.761 41.84 2;3 0.00017168 10340 20230619_1883_Aki_TMTPro18x_K_F4 109.24 99.549 428400 304010 414300 453490 502250 520590 490130 493070 559250 505880 553460 525260 574530 449850 529180 542300 636480 524160 395690 279670 423560 446370 514220 520610 497050 505950 565530 511250 568860 529980 583390 471560 544830 542470 607170 498460 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 2180800000 4625 3177 4388 8664;8665;8666;8667;8668;8669;8670;8671;8672;8673;8674;8675 7047;7048;7049;7050;7051;7052 7047 1840;1841 6 9606 Homo sapiens -0.10359666482031571 DNSTMGYMAAK Unmodified 1187.4951 0.49509412 3177 K9JA46;P07900;P07900-2;Q8TBA7;O75322;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 6 0.816 1 1 1 46.606 46.688 3 0.00017507 12441 20230619_1886_Aki_TMTPro18x_K_F6 113.38 104.42 503590 389370 506130 549710 521110 618270 581750 601240 650870 653650 665000 634430 769560 572580 614390 728240 724800 624480 465510 357840 514500 542710 542070 619330 585320 616700 659960 657190 685870 643100 774220 601150 634160 723240 691730 594600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1128000000 4626 3177 4388 8676;8677;8678 7053;7054 7053 2 9606 Homo sapiens -0.09115362619400003 DNSTMGYMMAK 2 Oxidation (M) 1279.4883 0.48829418 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 2 0 5.75 0.924 1 4 4 3 41.493 41.575 2;3 0.0011078 10124 20230619_1885_Aki_TMTPro18x_K_F5 85.813 72.935 469060 413900 464850 476840 548120 530780 558150 509370 613750 564550 632610 528190 577950 459840 614510 595840 586950 481190 433910 379390 473830 477230 562420 532460 563830 523420 622680 566600 645210 536020 593040 483770 622580 590310 561130 458640 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1420600000 4627 751 4389 8679;8680;8681;8682;8683;8684;8685;8686;8687;8688;8689;8690 7055;7056;7057;7058;7059;7060;7061;7062 7057 448;449;450 8 9606 Homo sapiens -0.14027043562259678 DNSTMGYMMAK 3 Oxidation (M) 1295.4832 0.4832088 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 3 0 5.29 1.03 2 2 2 1 36.713 36.787 2;3 0.00022054 8423 20230619_1885_Aki_TMTPro18x_K_F5 97.734 90.009 199610 143630 187050 202090 234160 222110 214420 212040 259380 231430 266420 241220 243070 206930 229810 257000 262510 239140 184340 132030 191800 199490 238770 222900 218740 217850 261890 233210 271810 243410 248210 217200 235870 256400 250690 227410 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 313270000 4628 751 4389 8691;8692;8693;8694;8695;8696;8697 7063;7064;7065;7066;7067;7068;7069;7070;7071 7066 448;449;450 9 9606 Homo sapiens -0.15271347424891246 DNSTMGYMMAK Oxidation (M) 1263.4934 0.49337956 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 1 0 6 0 1 45.517 45.603 2 0.0055109 11946 20230619_1886_Aki_TMTPro18x_K_F6 80.688 73.09 50983 48562 54419 60521 52248 65595 63267 57616 65504 73191 75459 75331 83987 57583 67481 79348 76561 65469 47217 44535 55015 60192 54779 65746 63225 59852 67043 73181 77312 75776 84564 61172 69472 78582 73088 62371 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97733000 4629 751 4389 8698 7072 7072 448;449;450 1 9606 Homo sapiens -0.12782739699673584 DNSTMGYMMAK Unmodified 1247.4985 0.49846494 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 0 7.2 0.748 1 2 2 51.309 51.386 2;3 8.5264E-09 14106 20230619_1888_Aki_TMTPro18x_K_F8 185.08 155.99 492790 402640 492150 480280 415350 544030 494800 498000 555270 626280 581610 568510 689330 521350 542430 702410 653800 602590 455660 369290 498850 479600 440350 544090 496410 515290 563850 624230 600000 578320 692770 549130 561170 696900 624120 573590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1725099999.9999998 4630 751 4389 8699;8700;8701;8702;8703 7073;7074;7075 7075 3 9606 Homo sapiens -0.11538435837042016 DNTCVVEFQFMLPTSHPNR Unmodified 2291.0463 0.046321626 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 7.5 0.5 1 1 59.763 59.805 3 1.0044000000000001E-24 17707 20230619_1888_Aki_TMTPro18x_K_F8 203.56 187.93 48748 37939 48158 46099 38471 54374 48460 46171 51823 45943 44398 45651 49981 42164 49549 54412 49809 53906 45058 34809 48825 46000 41088 54137 48398 47738 52301 46455 46170 46256 50815 44260 50435 54439 47683 51191 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18348000 4631 3833 4390 8704;8705 7076;7077 7076 2 9606 Homo sapiens -0.047559682247992896 DNTINLIHTFR Unmodified 1342.6993 0.69934831 3234 Q53R19;O15144;A0A024R408;H7C3F9 ARPC2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 4.5 3.5 1 1 49.715 49.751 3 9.7521E-24 14210 20230619_1880_Aki_TMTPro18x_K_F1 237.07 200.68 73007 52900 66667 83771 74255 84693 76985 68116 86181 99074 83099 79570 110090 82419 82890 100520 99499 95927 67411 48697 68469 81992 76646 85158 77733 71600 87290 97893 86544 81755 110150 85953 85775 100410 95015 91174 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 965370000 4632 3234 4391 8706;8707 7078;7079 7078 2 9606 Homo sapiens 0.041706608577896986 DNTQLLINQLWQLPTER Unmodified 2081.0906 0.090552927 3912 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog yes yes 0 0 0 1.5 0.5 1 1 64.804 64.808 3 1.0625E-06 20453 20230619_1880_Aki_TMTPro18x_K_F1 115.34 104.4 27207 21618 28296 23691 26017 26267 32934 28444 25707 31642 29133 32217 40174 30640 37761 29828 29904 35266 25161 19814 28593 23815 27341 26431 32584 29001 26777 31809 30251 32603 40496 31643 37962 30321 28725 33419 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51227000 4633 3912 4392 8708;8709 7080;7081 7080 2 9606 Homo sapiens 0.09325127255397092 DNTRPGANSPEMWSEAIK Oxidation (M) 2017.9164 0.91635331 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 1 1 5.5 0.5 1 1 47.051 47.13 3 0.00012309 12479 20230619_1885_Aki_TMTPro18x_K_F5 90.706 80.649 46513 38415 45786 47536 52885 58137 53791 49714 56735 53255 58827 53810 62807 44832 52068 62152 50579 56969 43006 35244 46691 47392 54389 57792 54272 51473 57715 53659 60391 54338 63395 47490 53113 61858 48452 54141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105510000 4634 1661 4393 8710;8711 7082 7082 1078 1 9606 Homo sapiens -0.05188821232263763 DNTTLLTQVQTTMR Oxidation (M) 1636.809 0.80903469 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4H4;A0A7I2V4Y9;B3KTX4;A8K8J9;H0YI98 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 1 0 6.5 0.5 1 1 47.669 47.753 3 0.00093174 12526 20230619_1887_Aki_TMTPro18x_K_F7 77.324 65.741 100780 84985 97372 103580 103810 115860 114710 109270 138680 112830 121750 151610 137600 113200 145290 128910 162160 151870 93178 77954 99340 103240 107660 116080 115740 112230 139180 115060 126650 150740 140300 118880 148440 130630 154920 144040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230640000 4635 1406 4394 8712;8713 7083 7083 877 1 9606 Homo sapiens 0.01610253624107827 DNTVHDLR Unmodified 968.46756 0.46755746 1754 Q08378;A0A8I5KYV8;Q08378-2;A0A8I5KWY9;A0A8I5KSF0;A0A8I5KQH9;A0A8I5KXF8;A0A8I5QKX6;A0A8I5KTE5;A0A8I5KQ98;A0A8I5QJ69;A0A8I5KVX9;A0A8I5KSV3;A0A8I5QKK4;A0A8I5KU25;A0A8I5KW20;A0A8I5KQN2;Q08378-4;A0A8I5KSX1;A0A8I5KU99 GOLGA3 Golgin subfamily A member 3 yes no 0 0 0 2 0 1 29.607 29.676 3 0.00073752 5600 20230619_1881_Aki_TMTPro18x_K_F2 114.84 74.796 27822 18248 31259 30905 45040 44495 39473 41121 44913 27150 39288 42683 30089 35166 39982 17126 44655 37802 25721 16820 31670 30331 45496 43871 40286 41860 45147 28689 40214 42331 31543 35545 40607 18741 42633 35710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31811000 4636 1754 4395 8714 7084 7084 1 9606 Homo sapiens -0.017937617730922284 DNTVHSFR Unmodified 974.45699 0.45699277 4710 Q9Y2R4;B3KM65;Q59H21 DDX52 Probable ATP-dependent RNA helicase DDX52 yes no 0 0 0 4.5 1.12 1 1 1 1 30.158 30.224 3 0.00062571 5634 20230619_1883_Aki_TMTPro18x_K_F4 116.73 71.648 47460 34520 45469 47960 61747 63769 55995 61483 69677 55570 61717 68958 62687 64155 54470 59674 71244 63271 43839 31726 46610 47526 62684 63223 57216 62783 69860 56915 63779 69209 63652 66042 56482 60241 67948 60086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88463000 4637 4710 4396 8715;8716;8717;8718 7085 7085 1 9606 Homo sapiens -0.03125744427518384 DNVDDPTGNFR Unmodified 1248.5371 0.53709359 1479 A8K7T4;A0A384NPY7;Q12907;B4DWN1 LMAN2 Vesicular integral-membrane protein VIP36 yes no 0 0 0 1.5 0.5 1 1 41.782 41.821 2 0.00013868 10684 20230619_1881_Aki_TMTPro18x_K_F2 134.57 119.9 175360 148570 146980 163560 186540 197560 169030 179690 273930 212290 250490 237620 207730 191680 209060 257220 267890 259530 161970 136140 152340 164420 190380 196860 174660 185630 271930 213730 256090 238650 213620 202620 216080 257400 255690 246510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 380200000 4638 1479 4397 8719;8720 7086 7086 1 9606 Homo sapiens -0.07723347615024068 DNVEGFNCER Unmodified 1238.4986 0.49859959 558 A0A024R972;P11047 LAMC1 Laminin subunit gamma-1 yes no 0 0 0 1 0 1 38.885 38.885 2 1.2612E-05 9599 20230619_1880_Aki_TMTPro18x_K_F1 164.31 152.46 49668 40163 36277 46700 55128 59997 51808 50206 80426 66796 63138 62261 72743 51140 55153 101920 79861 67282 45821 36829 38314 46783 55766 59448 53268 52400 79617 66526 65976 63122 73073 55798 58014 99512 76085 64318 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72698000 4639 558 4398 8721 7087 7087 1 9606 Homo sapiens -0.11110976521194971 DNVSSPGGATIHALHVLESGGFR Unmodified 2320.156 0.15600673 540 P32322-3;P32322;A0A024R8U9;E7D7X9;P32322-2;E2QRB3;Q2TU78;J3QKT4;Q8TBX0;J3KQ22;B7Z8T1 PYCR1;PIG45 Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase yes no 0 0 0 8 0 1 55.916 55.978 4 5.4825E-34 16152 20230619_1888_Aki_TMTPro18x_K_F8 197.4 179.81 45975 37608 44034 50194 30162 34317 39365 43744 42866 51030 57492 67415 52958 50280 59902 55427 59646 75283 42497 34532 44716 49450 32688 36121 39318 44257 44068 51637 58187 67067 54551 52698 60757 56739 57179 71237 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 382590000 4640 540 4399 8722 7088 7088 1 9606 Homo sapiens 0.048734967104337557 DNWEELYNR Unmodified 1237.5364 0.53636531 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B3KU93;B7Z1H4;B7Z1V9;H0YDG0 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 2.5 0.5 1 1 51.229 51.287 2 0.059412 14721 20230619_1882_Aki_TMTPro18x_K_F3 75.652 69.68 84424 68658 82756 82797 71199 100660 98232 89356 104840 105940 101890 116340 123930 98588 94868 125330 125800 140350 78048 62979 84072 82698 75761 100120 97669 92530 106350 106500 105720 117000 124390 103750 98857 126250 120170 133100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131400000 4641 2933 4400 8723;8724 7089 7089 1 9606 Homo sapiens -0.07290142264059796 DNWSPALTISK Unmodified 1230.6245 0.62445203 1279;4379 R4GND1;A0A1B0GX65;Q969T4;A0A087X283;C9J2P0;H7C061;B7Z306;A0A024R2K3;P51965-2;P51965-3;P51965;Q96LR5 UBE2E3;UBE2E2;UBE2E1 Ubiquitin-conjugating enzyme E2 E3;Ubiquitin-conjugating enzyme E2 E1;Ubiquitin-conjugating enzyme E2 E2 no no 0 0 0 8 0 1 56.876 56.933 3 0.00017669 16518 20230619_1888_Aki_TMTPro18x_K_F8 113.24 82.054 121060 101320 110940 97836 106160 122150 112120 102920 139660 113840 90941 85570 119490 93304 98296 130250 117300 111400 111880 92745 113380 99503 110920 121290 113540 106760 138800 113710 96805 88481 120030 97989 101550 129140 112010 106030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158940000 4642 1279;4379 4401 8725 7090 7090 1 9606 Homo sapiens 0.018364783265496953 DNYSPGWK Unmodified 965.4243 0.42429566 3402 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 6 0.816 1 1 1 46.44 46.523 2 0.007595 12363 20230619_1886_Aki_TMTPro18x_K_F6 107.15 79.629 146660 135130 161620 143530 190940 198930 175210 175270 229860 192180 210360 223140 233920 177950 216060 185600 239750 210260 135830 123760 163250 145080 195540 196500 179270 181100 230240 194340 217870 223480 237010 185570 221130 187900 228960 199550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 259800000 4643 3402 4402 8726;8727;8728 7091 7091 1 9606 Homo sapiens -0.059799515503755174 DNYVPEVSALDQEIIEVDPDTK Unmodified 2488.1857 0.18569468 3066 H3BNC9;P08708;H0YN88;A0A075B716 RPS17 40S ribosomal protein S17 yes no 0 0 0 1.5 0.5 1 1 63.789 63.793 3 3.7985E-08 20037 20230619_1880_Aki_TMTPro18x_K_F1 99.923 85.908 17909 11325 13798 17837 13015 13783 15508 14254 15501 21670 21824 19867 19289 17334 18359 21431 20936 24542 16505 10430 14369 17412 13651 14253 15497 14738 16066 21436 21970 20166 19728 18186 18847 21634 20032 23263 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138860000 4644 3066 4403 8729;8730 7092 7092 1 9606 Homo sapiens 0.0011292635463178158 DPAATSVAAAR Unmodified 1028.5251 0.52507234 950 A0A0A0MSE8;Q5TZN3;B2R4U3;O00762-4;O00762;K4DI81;A0A087WVK1;O00762-3 UBE2C Ubiquitin-conjugating enzyme E2 C yes no 0 0 0 4 0 1 35.565 35.613 2 1.8372E-08 7765 20230619_1883_Aki_TMTPro18x_K_F4 174.42 155.69 41345 24307 38577 41883 38720 50759 37671 34106 57157 46783 58251 53465 55924 46849 47047 31714 45304 68588 38142 22423 39444 40923 40291 50228 38648 36355 57119 46855 59558 53709 56705 47812 47821 34224 43524 64669 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33153000 4645 950 4404 8731 7093 7093 1 9606 Homo sapiens 0.011950804324442288 DPAEALQLPMDYVQR Unmodified 1744.8454 0.8454202 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2;K7EPH2;K7ERS0 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 5 0 1 62.157 62.206 3 1.427E-05 18899 20230619_1885_Aki_TMTPro18x_K_F5 109.83 89.445 44529 46007 45504 49540 43710 48979 46633 47202 59760 45762 51202 44437 51223 41433 52333 46024 45283 51219 41250 42123 46139 49750 45645 49549 47263 48317 59746 46318 52897 45098 52307 43105 52774 46490 43436 48572 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37123000 4646 4109 4405 8732 7094 7094 1 9606 Homo sapiens 0.002791305208575068 DPAEGDGAQPEETPR Unmodified 1567.675 0.67504363 3900;2497 Q14697-2;E9PKU7;B4DZ53;E9PNH1;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 1 0 1 35.108 35.108 2 8.5594E-15 8052 20230619_1880_Aki_TMTPro18x_K_F1 193.49 170.85 7036.3 4818.4 6186.5 6671.5 7534.5 11686 7675.9 9037.1 16674 9598.4 10471 19775 17172 18219 8872.3 18430 23703 35508 6493.2 4429.4 6383 6646.2 7771.7 11363 8003.1 9426.9 16212 10002 11378 19539 16966 18862 10042 19434 22617 33501 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17051000 4647 3900;2497 4406 8733 7095 7095 1 9606 Homo sapiens -0.08608688877029635 DPAGMPHPETGK Oxidation (M) 1251.5554 0.55538619 3250 O43252;Q05BW9;Q4W5H3 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 1 0 3.5 0.5 1 1 33.417 33.477 3 0.0057002 6938 20230619_1882_Aki_TMTPro18x_K_F3 69.03 58.125 56035 36228 41027 47232 80742 76342 59681 56727 67562 72015 84651 83110 88914 69962 68988 82563 99324 73685 51632 33290 43543 47144 80108 74565 61622 59700 69114 72310 86198 83434 89646 73267 72238 82241 94562 70175 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48406000 4648 3250 4407 8734;8735 7096;7097 7096 1918 2 9606 Homo sapiens -0.06032928964668827 DPAGMPHPETGK Unmodified 1235.5605 0.56047157 3250 O43252;Q05BW9;Q4W5H3 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 3.5 0.5 1 1 38.924 38.972 3 0.029398 9193 20230619_1882_Aki_TMTPro18x_K_F3 52.79 37.251 146810 124220 138520 149720 200370 198180 172840 165610 191310 186790 209960 195380 214730 174260 181690 225790 215620 195080 135710 113930 142380 149720 202340 196050 176430 171990 194640 187950 214620 197380 217390 183160 187450 224240 205830 185690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 170500000 4649 3250 4407 8736;8737 7098;7099 7098 2 9606 Homo sapiens -0.04788625102037258 DPAQPMSPGEATQSGAR Unmodified 1698.7631 0.76314713 4412 Q9BQG0;Q9BQG0-2;B4DZZ1;B4DWP5 MYBBP1A Myb-binding protein 1A yes no 0 0 0 3 0 1 38.141 38.195 3 0.00034114 8857 20230619_1882_Aki_TMTPro18x_K_F3 75.97 64.7 13440 11645 18688 16765 22455 19070 18020 17068 23365 16405 27899 16286 19905 18632 20448 18007 22577 19902 12472 10700 18583 16539 22856 19074 18600 17561 23635 16635 27978 16670 20603 19106 20887 18222 21562 18893 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18019000 4650 4412 4408 8738 7100 7100 1 9606 Homo sapiens -0.058283915580659595 DPAQPMSPGEATQSGARPADR Oxidation (M) 2153.976 0.97599345 4412 Q9BQG0;Q9BQG0-2;B4DZZ1;B4DWP5 MYBBP1A Myb-binding protein 1A yes no 0 1 1 3 0 1 32.24 32.318 3 0.065705 6518 20230619_1882_Aki_TMTPro18x_K_F3 43.534 33.785 6250.8 7269.8 7368.7 7656.2 9833.7 8323 7612.8 8091.2 9021.2 9335.8 7732.4 5576.8 7565.4 6606 8061.8 10606 8530.2 6030.4 5803.7 6652.6 7427.1 7712.7 9938.4 8371.3 7850.5 8311.3 9070.1 9255.4 7974.2 5880 7753.4 6987.3 8228.6 10331 8139.8 5785.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20301000 4651 4412 4409 8739 7101 7101 2768 1 9606 Homo sapiens -0.054835502888636256 DPDAQPGGELMLGGTDSK Oxidation (M) 1802.7993 0.79925787 1270 F8W787;A0A1B0GW44;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;V9HWI3;C9JH19;P07339;A0A1B0GVP3;A0A1B0GU92;A0A1B0GU03;H7C469;F8WD96 CTSD;HEL-S-130P Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 0 1 0 3 0 1 49.837 49.912 3 0.0011592 14081 20230619_1882_Aki_TMTPro18x_K_F3 69.737 58.793 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4652 1270 4410 8740 7102 7102 802 1 9606 Homo sapiens -0.07002979171898005 DPDAQPGGELMLGGTDSK Unmodified 1786.8043 0.80434324 1270 F8W787;A0A1B0GW44;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;V9HWI3;C9JH19;P07339;A0A1B0GVP3;A0A1B0GU92;A0A1B0GU03;H7C469;F8WD96 CTSD;HEL-S-130P Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 0 0 0 3 0 1 53.367 53.419 3 1.288E-07 15670 20230619_1882_Aki_TMTPro18x_K_F3 128.01 116.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4653 1270 4410 8741 7103 7103 1 9606 Homo sapiens -0.05758675309266437 DPDASKPEDWDER Unmodified 1558.6536 0.65357991 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;B4DHR1;K7EJB9;B4E2Y9 CALR;HEL-S-99n Calreticulin yes no 0 0 1 1.5 0.5 1 1 42.452 42.492 3 0.039051 11228 20230619_1880_Aki_TMTPro18x_K_F1 56.147 34.137 41972 35270 43092 38342 45705 51251 52799 50751 66018 45826 50822 58883 53314 44262 51337 61079 61608 69542 38825 32318 43700 38669 47476 50839 53213 51746 65830 47005 53026 58693 54255 47037 52861 61544 58902 65933 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159960000 4654 1691 4411 8742;8743 7104 7104 1 9606 Homo sapiens -0.10340073905763347 DPDDHTVCHLLFANQTEK Unmodified 2138.9691 0.96911716 311 P00387-3;P00387;P00387-2;A0A8J8YWN6;A0A8I5KR71;A0A024R4X0;A0A8I5KW26;A0A8J8Z3C6;A0A8I5QKX1;Q6ZVI6;A0A087WZB1 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form;NADH-cytochrome b5 reductase yes no 0 0 0 5 0.816 1 1 1 50.056 50.119 4 2.0324E-13 13786 20230619_1885_Aki_TMTPro18x_K_F5 146.2 130.26 349470 276280 357580 344560 313180 396660 378460 360410 510980 442100 430090 548990 577980 522340 423040 695610 656370 765320 323140 253540 361900 343090 331160 396200 381870 372980 509810 445960 452200 551610 578400 548760 447310 699190 626510 725760 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 825010000 4655 311 4412 8744;8745;8746 7105;7106;7107 7106 3 9606 Homo sapiens -0.054808631694413634 DPDTEEYRK Unmodified 1151.5095 0.50948185 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 1.5 0.5 1 1 35.649 35.677 3 0.00067996 7932 20230619_1881_Aki_TMTPro18x_K_F2 109.83 80.926 88562 48560 126260 124890 192200 213740 144650 167810 146830 117270 195850 218450 170080 159620 165070 63282 224720 196290 82010 45120 126110 120820 193040 208130 148790 173170 151240 124320 197670 214920 174280 161560 170630 72949 214230 185130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175110000 4656 3440 4413 8747;8748 7108 7108 1 9606 Homo sapiens -0.060212508752329086 DPEAPIFQVADYGIVADLFK Unmodified 2207.115 0.11503634 1075 P13804;A0A0S2Z3L0;A0A0S2Z3M4;P13804-2;H0YLU7;A0A8I5KVL5;A0A8I5KYH4;A0A8I5KYP7;A0A8I5KT03;A0A8I5KUR2;H0YK49;H0YL83 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes no 0 0 0 7 0 1 67.556 67.577 3 0.0070269 21157 20230619_1887_Aki_TMTPro18x_K_F7 61.648 44.367 2795.6 2856.8 2113.2 2183.7 2626 2852.9 2324.1 2687.4 1915.5 3762.9 1853.2 3083.5 4964.3 2383.4 1779.5 2793.6 3703.6 5786 2583.8 2609.1 2211.2 2272.8 2679.3 2833.7 2349.9 2782.9 1987.8 3720 2045.8 3129 4805.3 2518.7 1977.4 2963 3539.4 5456.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5206000 4657 1075 4414 8749 7109 7109 1 9606 Homo sapiens 0.059763426183053525 DPEEIEKEEQAAAEK Unmodified 1714.7897 0.78973904 205 C9J9K3;A0A8V8TMX1;A0A024R2L6;A0A0C4DG17;A0A8V8TLA4;P08865;A0A8I5KQE6;Q96RS2;A0A8V8TMP3;A0A024RCF2 RPSA;hCG_1989629 40S ribosomal protein SA yes no 0 0 1 1.5 0.5 2 2 48.766 48.798 3;4 1.0928E-10 13867 20230619_1880_Aki_TMTPro18x_K_F1 164.41 125.59 111950 81522 103700 126440 100630 129750 138170 120430 150580 137080 138530 150640 158270 118530 131680 138600 125460 128590 103380 75022 106170 123950 105930 130630 137450 124200 152190 138080 143640 151150 159510 124430 134060 138400 120120 122230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159050000 4658 205 4415 8750;8751;8752;8753 7110;7111 7110 2 9606 Homo sapiens -0.039064241857431625 DPELWGSVLLESNPYR Unmodified 1873.921 0.92102798 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 7.5 0.5 1 1 64.232 64.257 3 1.868E-14 19779 20230619_1887_Aki_TMTPro18x_K_F7 174.83 151.69 49793 44748 47757 54286 36489 56295 61319 69184 77479 74901 65556 82864 81386 70698 66671 110650 99752 127250 46055 41034 48586 54081 39609 57023 60888 69907 77555 75617 68623 83363 81928 75464 70134 111310 95313 120580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163610000 4659 826 4416 8754;8755 7112 7112 1 9606 Homo sapiens 0.019024309728138178 DPENFPFVVLGNK Unmodified 1474.7456 0.7456298 1257 A0A158RFU6;P51149;A0A6Q8PG52;A0A6Q8PH84;A0A6Q8PGE6;C9J592;C9IZZ0 RAB7A Ras-related protein Rab-7a yes no 0 0 0 7.5 0.5 1 1 63.12 63.149 3 2.36E-08 19227 20230619_1887_Aki_TMTPro18x_K_F7 164.11 152.54 851430 765790 806800 886900 715410 886590 825230 812610 860910 1000100 981430 1014600 1082600 955960 1032600 1154200 1026800 1163900 787440 701930 822460 885800 754080 894860 827220 840530 880660 1001000 1006100 1027400 1099500 998420 1051300 1156900 983400 1104900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2416200000 4660 1257 4417 8756;8757 7113;7114 7113 2 9606 Homo sapiens 0.027246809692314855 DPETLVGYSMVGCQR Unmodified 1710.7705 0.7705407 3606 P49327;A0A0U1RQF0;A0A0U1RRG3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 6 0 1 56.428 56.502 3 4.6952E-14 16637 20230619_1886_Aki_TMTPro18x_K_F6 137.93 126.66 42417 35522 37262 44086 35751 44605 38573 38774 53516 56123 60137 61094 71315 58149 52782 64732 61072 70824 39188 32589 38301 43813 37413 44925 39203 40490 53959 55956 61858 61693 71528 60449 54524 65250 58421 67168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233790000 4661 3606 4418 8758 7115 7115 1 9606 Homo sapiens -0.0564137528201627 DPETLVGYSMVGCQR Oxidation (M) 1726.7655 0.76545532 3606 P49327;A0A0U1RQF0;A0A0U1RRG3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 1 0 6 0 1 51.623 51.7 3 0.00026791 14634 20230619_1886_Aki_TMTPro18x_K_F6 95.854 86.81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4662 3606 4418 8759 7116 7116 2276 1 9606 Homo sapiens -0.06885679144647838 DPFAHLPK Unmodified 923.4865 0.48650199 3510 Q53YD7;P26641;P26641-2;B4DUP0 EEF1G Elongation factor 1-gamma yes no 0 0 0 5.33 3.09 1 1 1 48.048 48.121 3 0.0025715 12695 20230619_1887_Aki_TMTPro18x_K_F7 94.302 42.448 959100 688610 699590 882220 612280 873300 762290 846320 1194100 1066700 1009000 1398700 1643000 1456000 749410 2202000 1745300 2168400 884180 632360 732210 874650 650050 882620 773320 872470 1185000 1077000 1073000 1407800 1616000 1538900 840940 2193900 1663200 2058300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4734500000 4663 3510 4419 8760;8761;8762 7117;7118;7119 7118 3 9606 Homo sapiens 0.02169819588596056 DPFYMGLYQK Unmodified 1260.5849 0.5848954 1317 A0A1W2PPH1;A0A1W2PQH3;P23368;A0A1W2PR68;A0A1W2PQT3;A0A1W2PQY8;A0A1W2PQ37;A0A1W2PQF8;P23368-2 ME2 NAD-dependent malic enzyme, mitochondrial yes no 0 0 0 1 0 1 61.567 61.567 3 0.0080528 19115 20230619_1880_Aki_TMTPro18x_K_F1 58.699 45.579 58511 43597 52617 63121 53401 57703 60457 64350 73531 63265 61129 69872 67788 55444 65340 65819 66761 69130 54028 40084 54014 62048 55617 58897 60957 65259 73663 64197 63661 70110 68848 58227 66566 66164 63879 65616 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64441000 4664 1317 4420 8763 7120 7120 1 9606 Homo sapiens -0.03497364948543691 DPGLVDQLVK Unmodified 1082.5972 0.59717465 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 0 5.2 0.748 1 2 2 57.142 57.195 2;3 0.00049901 16933 20230619_1886_Aki_TMTPro18x_K_F6 136.63 97.088 415240 332140 375010 430520 335080 413230 406620 399760 445030 443970 467590 544190 513220 470360 554900 585560 546210 653810 383600 304910 384070 426380 353580 418740 407140 410720 452150 449360 481420 545350 524560 493600 563260 590280 523440 619870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 919280000 4665 3609 4421 8764;8765;8766;8767;8768 7121;7122 7122 2 9606 Homo sapiens 0.05917994786182135 DPGMGAMGGMGGGMGGGMF Unmodified 1673.6129 0.61285954 272 P10809;A0A024R3X4;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 7 0 1 64.532 64.562 2 0.00047389 19907 20230619_1887_Aki_TMTPro18x_K_F7 75.695 75.695 34803 24913 29340 33472 21970 30011 32550 35627 37642 42125 29158 44242 41433 39471 35756 39353 39487 49700 32114 22890 30181 33054 23751 30719 32372 36177 37777 42272 30960 44576 41664 40866 36686 40119 37816 47058 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24812000 4666 272 4422 8769 7123 7123 1 9606 Homo sapiens -0.19700237408937937 DPGTGFVFSCLSGQGR Unmodified 1683.7675 0.76750423 48 A0A8V8TL27;A0A8V8TL18;A0A8V8TLG1;A0A8V8TL47;A0A024QZM5;A0A8V8TMP9;Q9ULE6;A0A8V8TL39 KIAA1274;PALD1 Paladin yes no 0 0 0 1 0 1 59.608 59.608 3 0.00044833 18362 20230619_1880_Aki_TMTPro18x_K_F1 80.387 71.432 12028 10613 12248 12084 13970 17604 14116 13780 18501 15460 14474 17210 20731 17844 16613 16371 19554 20551 11129 9726.5 12452 12156 14402 17290 14356 14384 18442 15603 15331 17400 20770 18314 17125 16712 18688 19471 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13682000 4667 48 4423 8770 7124 7124 1 9606 Homo sapiens -0.047028823445089074 DPGVLDR Unmodified 770.39227 0.39226725 3537 P31949;V9HWH9;B2R5H0 S100A11;HEL-S-43 Protein S100-A11;Protein S100-A11, N-terminally processed;Protein S100 yes no 0 0 0 2.5 0.5 1 1 38.388 38.447 2 0.020317 9101 20230619_1881_Aki_TMTPro18x_K_F2 104.75 69.641 310730 227400 257050 470860 945950 1049200 1116400 1081100 1650800 910610 809250 775480 1171700 685080 739880 1106100 967560 855330 286730 210150 277970 462250 933520 1016800 1129700 1096600 1616000 926890 884910 791200 1162300 733120 774480 1089600 922780 815470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 648390000 4668 3537 4424 8771;8772 7125;7126 7125 2 9606 Homo sapiens -0.002113192335173153 DPIPYLPPLEK Unmodified 1280.7016 0.70163972 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-3 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 0 6.5 0.5 1 1 62.292 62.336 3 0.0026683 18840 20230619_1887_Aki_TMTPro18x_K_F7 74.611 58.357 558620 472640 551360 661190 555480 693310 635290 659250 735290 750020 752910 773420 804750 695450 704670 764940 830370 914650 516600 434170 561550 652330 579520 697490 639150 678280 744350 753840 774020 781280 815090 723870 725600 775770 793860 866840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1231100000 4669 33 4425 8773;8774 7127;7128 7128 2 9606 Homo sapiens 0.07251696542903119 DPIVMGVTVEAGQVK Unmodified 1541.8123 0.81232916 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 0 6 0 1 59.493 59.555 3 0.022058 17945 20230619_1886_Aki_TMTPro18x_K_F6 54.09 39.118 22080 19265 21573 27158 30043 30153 28279 27134 44451 27874 33336 33836 32392 27663 34217 34277 30088 35718 20421 17697 22116 26799 30496 30196 29092 27958 43866 28352 34689 33881 33176 29085 34538 34421 28867 33889 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17953000 4670 817 4426 8775 7129 7129 1 9606 Homo sapiens 0.06309548468834691 DPIYFTGLASEPGAR Unmodified 1592.7835 0.78347187 2160 A8KAQ3;Q99523-2;Q99523 SORT1 Sortilin yes no 0 0 0 6 0 1 58.629 58.694 2 0.00064849 17576 20230619_1886_Aki_TMTPro18x_K_F6 99.215 79.454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4671 2160 4427 8776 7130 7130 1 9606 Homo sapiens 0.01079147164045935 DPLLLAIIPK Unmodified 1091.6954 0.69543213 2082 A8K5Y7;Q9HAV4;B3KPQ5;H0Y9I3 XPO5 Exportin-5 yes no 0 0 0 2 0 1 64.439 64.447 3 0.0029686 20574 20230619_1881_Aki_TMTPro18x_K_F2 86.898 63.341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4672 2082 4428 8777 7131 7131 1 9606 Homo sapiens 0.15325223102013297 DPLNPIK Unmodified 795.44905 0.44905385 3922 Q15181;V9HWB5;Q5SQT6 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 0 0 6.5 0.5 1 1 49.526 49.607 2;3 0.036792 13405 20230619_1887_Aki_TMTPro18x_K_F7 92.187 38.633 361790 278750 311640 353050 309210 376640 343400 329210 441490 446710 456610 482710 523770 424260 365970 595140 552290 510590 334030 255880 320990 350670 322860 377920 347310 342850 444970 446350 470660 486570 524980 448530 386460 589880 526340 486010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 301130000 4673 3922 4429 8778;8779 7132;7133 7133 2 9606 Homo sapiens 0.04314728323004147 DPMEPPR Oxidation (M) 856.3749 0.37490263 3859 Q6I9S2;Q13573;G3V3A4;G3V4X8;B7Z9X2;B4DY36;A0A024R6E3;B4DEG7;Q6P151;Q0D2M5 SNW1 SNW domain-containing protein 1 yes no 0 1 0 1 0 1 29.913 29.913 2 0.042892 5954 20230619_1880_Aki_TMTPro18x_K_F1 83.377 72.56 11889 9422.1 10812 11350 13918 14899 12737 15790 17012 13903 14272 17138 15635 13691 12644 14030 20123 16587 10983 8643.6 11122 11354 14185 14816 13048 16006 16976 14251 14847 17122 15784 14254 13327 14234 19157 15740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12019000 4674 3859 4430 8780 7134 7134 2537 1 9606 Homo sapiens -0.059029828308325705 DPNCVGTVLASRPHTLDGR Unmodified 2064.0171 0.017070408 1118 K7EQ55;K7EK33;A0A0S2Z569;Q96EP5-2;Q96EP5;K7EQ02;Q5IRN2 DAZAP1;DAZAP1/MEF2D fusion DAZ-associated protein 1 yes no 0 0 1 8 0 1 44.023 44.041 4 6.5175E-10 11093 20230619_1888_Aki_TMTPro18x_K_F8 129.32 102.59 39291 33025 33192 39891 39065 41716 43728 37275 48485 47595 51496 44961 50869 50462 42098 64706 62098 63346 36291 30291 34356 39737 40242 41954 43947 38686 49243 47494 52613 46012 51594 52596 44193 64645 59230 60176 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97920000 4675 1118 4431 8781 7135 7135 1 9606 Homo sapiens 0.02762255541210834 DPNDVRPIQAR Unmodified 1279.6633 0.66329715 4506 Q9H307;A8K964;G3V5F0;G3V579 PNN Pinin yes no 0 0 1 4.5 0.5 1 1 34.402 34.49 3 5.4633E-06 7318 20230619_1883_Aki_TMTPro18x_K_F4 132.17 106.95 32419 23065 31506 32697 40724 45876 40587 37958 52224 38615 44023 43790 40777 31279 40646 36461 38469 39913 29945 21205 32232 32386 41594 45193 41270 39342 52169 39177 45410 43787 41688 32969 41191 36767 36838 37868 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111300000 4676 4506 4432 8782;8783 7136;7137 7136 2 9606 Homo sapiens 0.03465203680934792 DPNIVIAK Unmodified 868.50182 0.5018177 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;B4DDM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 5.8 0.748 2 2 1 49.172 49.25 2;3 0.010666 13556 20230619_1886_Aki_TMTPro18x_K_F6 73.157 48.821 564620 432670 472090 493370 567680 669870 605800 590850 803090 685100 740470 874560 867360 746550 676480 969340 957340 886820 521180 396760 488930 495650 584020 662130 614480 611550 804240 693460 768900 874900 872560 785710 708330 965040 912770 843440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2942999999.9999995 4677 2389 4433 8784;8785;8786;8787;8788 7138;7139 7138 2 9606 Homo sapiens 0.062306863857997996 DPNNDFRK Unmodified 1004.4676 0.46755746 1212 A0A140VJY7;Q9BRA2;I3L2R6 TXNDC17 Thioredoxin domain-containing protein 17 yes no 0 0 1 4.5 0.5 1 1 36.411 36.48 3 0.034768 8063 20230619_1885_Aki_TMTPro18x_K_F5 63.076 31.141 93429 44566 94717 104240 124730 132520 114940 133070 149890 99549 127920 142200 141940 114830 108430 67411 163160 139050 86176 41366 96615 100620 126930 131750 117550 134950 149680 103770 132940 141350 142840 116960 113610 72667 155410 131400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123280000 4678 1212 4434 8789;8790 7140 7140 1 9606 Homo sapiens -0.03449761773094906 DPNNLLNDWSQK Unmodified 1442.679 0.6790068 1088 A0A0S2Z489;O00232-2;O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 6 0.816 1 1 1 59.564 59.618 3 0.00010885 18006 20230619_1886_Aki_TMTPro18x_K_F6 109.96 88.085 53725 47438 49718 58570 52384 59546 58882 58373 64814 69305 60061 64813 67879 50921 67315 74953 68681 67933 49671 43512 50936 58240 54398 60113 59176 60012 65562 69301 62238 65517 68962 54281 68577 74517 65695 64600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 370950000 4679 1088 4435 8791;8792;8793 7141 7141 1 9606 Homo sapiens -0.024625545926937775 DPNQLIR Unmodified 854.46102 0.46101552 1129;1341 O00203;O00203-3;A0A0S2Z5J4;A8K586;A0A8Q3WKJ9;A0A8Q3WL34;A0A8Q3SIS1;A0A8Q3SHS3;A0A8Q3SHW6;A0A8Q3SHR2;A0A8Q3SI03;A0A8Q3WKN2;A0A8Q3SIM7;A0A8Q3WKF8;A0A8Q3SHU2;A0A0S2Z4Z4;A0A8Q3WKI5;Q3MNE1;A0A8Q3SHP3;A0A8Q3SHS6;F5GWU4;A0A590UJ60;A0A5F9UJV3;A0A2R8Y2A8;A0A590UKC4;Q68CN5;Q13367;Q13367-4;A0A590UJW5 AP3B1;AP3B2;DKFZp686D17136 AP-3 complex subunit beta-1;AP-3 complex subunit beta;AP-3 complex subunit beta-2 no no 0 0 0 5 0 1 41.094 41.181 2 0.036118 10017 20230619_1885_Aki_TMTPro18x_K_F5 92.491 61.188 110460 103030 104030 118840 126620 150120 123490 122510 170160 134020 140190 168340 177590 143820 143270 180230 207580 184250 102180 94423 106650 119100 129830 148780 126100 127390 169470 135990 147040 168480 178480 151100 150030 180640 197830 175040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87505000 4680 1129;1341 4436 8794 7142 7142 1 9606 Homo sapiens 0.027963450661900424 DPNSPLYSVK Unmodified 1118.5608 0.56078914 3102 Q9NUU7;I3L0H8;Q9UMR2;Q9UMR2-4;Q9UMR2-2;A0A0U4B4U6;F6QDS0;H3BQK0;Q53G16;Q7Z4W5;Q9HBZ9;Q2NL95;B4DS24;H3BTB3;H3BN59;H3BMQ5 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B yes no 0 0 0 6.5 0.5 1 1 49.354 49.435 2 1.6337E-06 13312 20230619_1887_Aki_TMTPro18x_K_F7 198.93 144.96 195080 150130 170430 185160 184110 211040 196640 180860 217810 219470 240900 242390 244390 210250 207420 268980 253930 244370 180130 137770 175490 184430 190620 210740 198200 187950 221640 220460 246200 244010 247610 220980 214480 267810 242440 232400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139910000 4681 3102 4437 8795;8796 7143;7144 7144 2 9606 Homo sapiens 0.0062511788946721936 DPNTYFIVGTAMVYPEEAEPK Unmodified 2370.109 0.10896469 1710 Q16531;A0A7P0TAK7;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5;Q16531-2;F5H198 DDB1 DNA damage-binding protein 1 yes no 0 0 0 6 0 1 63.529 63.577 3 4.3355E-08 19710 20230619_1886_Aki_TMTPro18x_K_F6 108.37 93.12 34568 21430 32630 35686 30506 37272 34407 31644 41155 40495 41944 49300 48998 46333 38191 61524 54913 67631 31901 19754 33297 34861 32001 37414 34677 32975 41586 40734 43346 49560 49324 48679 40082 61842 52466 64125 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65943000 4682 1710 4438 8797 7145 7145 1 9606 Homo sapiens -0.021285436755533738 DPNVVGQLAK Unmodified 1039.5662 0.56620887 4365 Q96I99;Q3ZCW5;E9PDQ8;Q96I99-2;B7Z2D5;Q9Y436 SUCLG2;DKFZp586M2023 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 6 0 1 49.473 49.551 3 0.019678 13704 20230619_1886_Aki_TMTPro18x_K_F6 63.408 43.079 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4683 4365 4439 8798 7146 7146 1 9606 Homo sapiens 0.048008414719333814 DPPANLFEDMDLNK Unmodified 1617.7345 0.73447277 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;Q6ZME7;H0Y827;Q96AY3-2 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 0 0 5 0 1 62.537 62.584 3 0.0060745 19074 20230619_1885_Aki_TMTPro18x_K_F5 68.044 56.252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4684 167 4440 8799 7147 7147 1 9606 Homo sapiens -0.04968509187210657 DPPHNNFFFFDGMK Unmodified 1711.7453 0.74531222 107 A0A024R0R4;Q9UBE0;M0QZS6;B4DY66 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes no 0 0 0 7.5 0.5 1 1 61.004 61.042 3 0.0011534 18212 20230619_1888_Aki_TMTPro18x_K_F8 78.326 67.51 136190 105280 129150 135210 105580 149130 139370 136280 158290 168070 170860 162900 188200 158870 153610 193030 182250 190950 125830 96649 131510 134260 112720 149360 139190 140970 160730 168010 175390 165540 189890 165840 158610 193200 174150 181350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131630000 4685 107 4441 8800;8801 7148 7148 1 9606 Homo sapiens -0.08209062022319813 DPPLAAVTTAVQELLR Unmodified 1692.941 0.94103514 1304 Q15477;A0A8V8TLC0;A0A1U9X8J0;A0A1U9X8J1;A0A1U9X8J2;A0A1U9X8J6;Q96BC0;O76046;Q9NPK3;A0A8V8TL97;H7C4L3;H7C5N0;A0A8V8TLA2;B4E0N1;B4DM01;A0A8V8TN04;A0A1U9X8I7;A0A1U9X8I9;B4DSY1;Q59F56 SKIV2L;SKI2W Helicase SKI2W yes no 0 0 0 2 0 1 67.193 67.2 3 0.00057936 21701 20230619_1881_Aki_TMTPro18x_K_F2 75.376 66.777 3473.5 2541.4 1780.8 3377 3263.4 2722.9 2102.2 2365.4 4705.7 2943.1 2726.8 4051.6 2713.2 3859.3 2968.3 2585.9 3258.7 3373.4 3196.7 2334.5 1979.6 3329.7 3245 2797.5 2265.2 2458.9 4564.3 2982.7 2898.9 4048.3 2793.7 3913 3027.7 2665.9 3115.9 3195.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2491800 4686 1304 4442 8802 7149 7149 1 9606 Homo sapiens 0.12228226703405198 DPPPPGTQGVVYFADDDNTYSR Unmodified 2410.0713 0.071333627 3330 O94766;Q5U676;B4DNL8;O94766-2;G3V150 B3GAT3 Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 yes no 0 0 0 3 0 1 55.342 55.383 3 0.033333 16509 20230619_1882_Aki_TMTPro18x_K_F3 44.158 41.192 96942 71066 89371 91563 80107 92348 102450 96031 115040 129280 131080 126960 145910 113540 138520 150690 134650 132110 89524 65259 91301 90808 84593 93401 102400 98754 117190 128780 134370 128580 148000 119550 140840 149760 128860 125680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35765000 4687 3330 4443 8803 7150 7150 1 9606 Homo sapiens -0.07729918616814757 DPQALSEHLK Unmodified 1136.5826 0.58258722 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 6 1.41 1 1 1 1 1 43.905 43.969 3 0.0030154 11295 20230619_1883_Aki_TMTPro18x_K_F4 77.157 53.306 200150 146670 183620 200360 185930 202400 203010 179650 209510 250860 234900 238700 259690 209560 202910 275510 268520 269490 184830 134770 188030 197890 193390 204000 203910 187110 214350 249300 240880 241870 261530 220690 211360 275240 256290 256030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 780560000 4688 2088 4444 8804;8805;8806;8807;8808 7151 7151 1 9606 Homo sapiens 0.019759226380301698 DPQELLEGGNQGEGDPQAEGR Unmodified 2194.9727 0.97268222 1894 A0M8Q2;Q6IPC0;P49593;B5MCT7;P49593-2 PPM1F Protein phosphatase 1F yes no 0 0 0 1 0 1 50.388 50.388 3 1.0305E-22 14484 20230619_1880_Aki_TMTPro18x_K_F1 179.42 174.09 17972 12543 16468 16273 15576 18210 15548 17383 19381 16254 20642 23952 22348 18182 19251 20093 22936 23550 16592 11521 16838 16154 16268 18244 15810 17786 19565 16723 21214 23764 22603 19049 19838 20354 21913 22329 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28597000 4689 1894 4445 8809 7152 7152 1 9606 Homo sapiens -0.07700521861897869 DPQHDLDR Unmodified 994.44682 0.44682202 1449 A0A384NPX8;A0A384MTZ1;P47985;P0C7P4 UQCRFS1;UQCRFS1P1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11;Putative cytochrome b-c1 complex subunit Rieske-like protein 1 yes no 0 0 0 1 0 1 30.141 30.141 3 0.0020101 6035 20230619_1880_Aki_TMTPro18x_K_F1 108.57 77.883 33111 13850 39497 49024 59313 68382 55499 54692 69635 39241 61842 63587 50437 49504 50128 28342 57549 56548 30572 12991 39960 46766 59962 67271 56589 56417 69686 41292 63325 62931 51871 50405 51263 30483 54984 53414 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47910000 4690 1449 4446 8810 7153 7153 1 9606 Homo sapiens -0.05062352152776839 DPQQEDFLQGR Unmodified 1331.6106 0.61059288 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2 UBR4 E3 ubiquitin-protein ligase UBR4 no no 0 0 0 2 0 1 45.815 45.897 2 0.01038 12536 20230619_1881_Aki_TMTPro18x_K_F2 97.452 83.457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4691 4061 4447 8811 7154 7154 1 9606 Homo sapiens -0.04194799172546482 DPSASPGDAGEQAIR Unmodified 1469.6746 0.6746497 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9 VCL;HEL114 Vinculin yes no 0 0 0 1.5 0.5 1 1 38.209 38.241 2 1.3622999999999998E-32 9025 20230619_1881_Aki_TMTPro18x_K_F2 243.85 226.46 27759 17694 22261 31522 36709 47025 43580 42753 67060 36645 34657 42293 41636 32346 31259 50633 41460 44891 25590 16323 23368 30859 37276 46227 44199 43795 65603 37599 37423 42350 41788 34659 32641 50203 39594 42686 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93729000 4692 51 4448 8812;8813 7155 7155 1 9606 Homo sapiens -0.04140063806221406 DPSQQELPR Unmodified 1068.52 0.51998696 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 2.5 0.5 1 1 36.72 36.776 2 1.1035E-05 8368 20230619_1881_Aki_TMTPro18x_K_F2 171.46 141.65 684950 476000 578500 578740 512720 581940 597490 563070 760260 846340 991970 884850 900410 772190 685700 792980 1022600 880690 631940 436950 595490 576210 540710 587890 602810 584250 774520 841270 1001700 892700 911870 801470 720150 801230 974200 836070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 900680000 4693 3606 4449 8814;8815 7156;7157 7156 2 9606 Homo sapiens -0.01153223430151229 DPSVTQVTR Unmodified 1001.5142 0.5141733 2015 A8K2G0;O15126;O15126-2;B4DP10 SCAMP1 Secretory carrier-associated membrane protein 1 yes no 0 0 0 3.5 0.5 1 1 36.162 36.213 2 0.00071492 8018 20230619_1883_Aki_TMTPro18x_K_F4 141.2 103.47 49787 31646 36573 45218 53506 63378 45329 53928 81869 63893 70980 90764 100480 90102 46072 115220 141340 158320 45872 29112 38559 44753 54166 62464 47300 55983 80880 64927 74670 90929 99186 94333 53444 117540 134430 149860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63160000 4694 2015 4450 8816;8817 7158 7158 1 9606 Homo sapiens 0.013476780581981984 DPSVVVR Unmodified 770.42865 0.42865276 3904 Q14974;Q14974-2;B7Z752;B7Z5M1;J3KTM9;J3QKQ5 KPNB1 Importin subunit beta-1 yes no 0 0 0 5 0 1 37.577 37.67 2 0.022955 8547 20230619_1885_Aki_TMTPro18x_K_F5 101.21 29.834 119780 91676 129780 116170 180560 193140 173160 144180 207550 157380 188240 195680 202180 180150 216420 158500 239960 259760 110790 84156 131700 116300 183280 188340 175960 151060 208570 159700 194770 196310 206670 185320 220780 165470 229500 245570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135230000 4695 3904 4451 8818 7159 7159 1 9606 Homo sapiens 0.034255576631949225 DPTGMDPDDIWQLSSSLK Unmodified 2003.9146 0.91462198 2451 B4DDB9;E9PI68;Q15005;E9PL01;E9PRB9 SPCS2 Signal peptidase complex subunit 2 yes no 0 0 0 5.5 0.5 1 1 64.386 64.432 3 5.0716E-07 20090 20230619_1886_Aki_TMTPro18x_K_F6 116.06 103.9 80322 63063 85963 95176 72683 98118 84120 85487 104330 110360 102620 119050 126160 116720 89359 161840 428730 167590 74296 57997 86728 93460 77010 98628 84817 88893 105150 110490 106470 120420 126830 122840 110490 161980 405120 160080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152220000 4696 2451 4452 8819;8820 7160;7161 7160 2 9606 Homo sapiens -0.0471787504088752 DPVASSLSPYFGTK Unmodified 1467.7246 0.72456001 2243 B2R7D2;Q9UNW1;Q9UNW1-3;Q9UNW1-2 MINPP1 Multiple inositol polyphosphate phosphatase 1 yes no 0 0 0 1.5 0.5 1 1 60.053 60.059 3 8.9072E-05 18659 20230619_1881_Aki_TMTPro18x_K_F2 96.464 75.879 30077 23594 26987 27489 27413 34226 29834 32638 30872 30616 31821 31961 34143 27660 32947 37326 36172 35762 27781 21638 27685 27537 28541 34053 29988 33384 31437 31086 32713 32257 34710 29189 33726 37253 34575 33985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106930000 4697 2243 4453 8821;8822 7162 7162 1 9606 Homo sapiens 0.009406708696815258 DPVHTVSLQQFIYEK Unmodified 1802.9203 0.9202997 4665 Q9UI26;Q9UI26-2;E7EMB7;Q5HY91 IPO11;DKFZp686E10165 Importin-11 yes no 0 0 0 8 0 1 59.193 59.235 3 4.919E-15 17482 20230619_1888_Aki_TMTPro18x_K_F8 192.65 162.52 33751 26245 34379 35919 32507 41775 36063 33720 44598 35558 37469 44545 45847 39697 38318 54489 59301 63036 31204 24111 34859 35543 34066 41591 36418 35072 44648 36141 39190 44663 46207 41897 40344 54936 56562 59768 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13133000 4698 4665 4454 8823 7163 7163 1 9606 Homo sapiens 0.05095636323744657 DPVQCSR Unmodified 860.38105 0.38105064 4402 V9HWC2;Q99497;K7ELW0;K7EN27 HEL-S-67p;PARK7 Protein deglycase DJ-1 yes no 0 0 0 3 0 1 29.934 30.028 2 0.024527 5617 20230619_1882_Aki_TMTPro18x_K_F3 89.296 61.771 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4699 4402 4455 8824 7164 7164 1 9606 Homo sapiens -0.054724645993019294 DPVQEAWAEDVDLR Unmodified 1641.7635 0.76346471 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 2.5 1.12 1 1 1 1 59.904 59.915 3 1.265E-16 18380 20230619_1880_Aki_TMTPro18x_K_F1 165.78 146.71 107540 94953 110420 108210 102470 122730 129450 132210 131770 131890 125460 125950 134970 117750 140910 145640 135510 145570 99513 87026 111830 108440 107830 123210 129060 134360 133890 133100 129490 127890 137750 123210 142910 145900 129780 138230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5672900000 4700 370;3451 4456 8825;8826;8827;8828 7165;7166;7167 7165 3 9606 Homo sapiens -0.03174648566596261 DPVSIEER Unmodified 943.46108 0.4610751 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q86UM1;C9JZG1;C9JQN7 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 1 0 1 39.774 39.774 2 0.0038915 10005 20230619_1880_Aki_TMTPro18x_K_F1 118.06 97.504 76489 46756 55629 69732 59920 87802 72823 66869 93545 89898 91575 114310 127760 122900 72099 147410 175570 193280 70456 43042 58426 68703 62507 86850 73286 70405 94078 90438 95714 115250 126830 127790 80418 150030 167110 183030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76777000 4701 487 4457 8829 7168 7168 1 9606 Homo sapiens -0.012916997244701633 DPVTFQHQHQR Unmodified 1391.6694 0.66944516 4490 Q9H089;H7C2X7 LSG1 Large subunit GTPase 1 homolog yes no 0 0 0 5 0 1 29.303 29.377 4 0.00011151 5488 20230619_1885_Aki_TMTPro18x_K_F5 123.63 99.243 20610 13563 17753 23084 26857 32149 21703 20786 31728 29255 32740 33223 29739 31193 24097 27350 37441 33295 19012 12502 18442 22612 27086 31541 22484 22250 31792 29258 33402 33459 30233 32020 25354 27875 35666 31576 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28755000 4702 4490 4458 8830 7169;7170 7170 2 9606 Homo sapiens -0.010722780875539684 DPVYTFSISQNPFPIENR Unmodified 2123.0324 0.032369346 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;B4DG89;I3L283;I3L3I1 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 0 8 0 1 62.856 62.881 3 2.3194E-06 19048 20230619_1888_Aki_TMTPro18x_K_F8 97.095 83.671 24965 21659 24402 31906 22391 34680 35744 16860 26279 59303 39681 72075 58681 62971 41554 62964 68718 110920 23089 19906 24874 31372 23821 34427 34934 19664 28023 58016 41132 72106 58590 65276 44185 65869 65779 104690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222590000 4703 534 4459 8831 7171 7171 1 9606 Homo sapiens 0.015774456100643874 DPYCHPVCANR Unmodified 1387.5761 0.57613841 4749 Q9Y5Q8-2;Q9Y5Q8;Q9Y5Q8-3;Q5T7U1;Q5T7U4 GTF3C5 General transcription factor 3C polypeptide 5 yes no 0 0 0 4.5 0.5 1 1 31.92 31.99 3 2.6403E-06 6391 20230619_1885_Aki_TMTPro18x_K_F5 148.91 137.7 60159 39158 48597 63485 68248 66086 63783 64442 81225 62622 66468 66049 71704 60505 61788 68897 81826 69860 55468 36074 50703 62092 69199 66582 65084 65908 81133 63531 69108 66724 72571 63042 64142 69139 78014 66387 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 103450000 4704 4749 4460 8832;8833 7172;7173;7174 7174 3 9606 Homo sapiens -0.10214661856639395 DPYGNRPLCIGR Unmodified 1416.6932 0.69321707 2042 Q53H22;A8K4H7;Q06203 PPAT Amidophosphoribosyltransferase yes no 0 0 1 1 0 1 41.159 41.159 3 0.00022885 10584 20230619_1880_Aki_TMTPro18x_K_F1 102.05 72.7 86676 86823 90104 90928 86023 101600 103710 96661 94885 92595 113440 103990 100330 93582 121050 95836 125240 108060 80285 79482 91207 91681 90145 101830 103290 99012 97852 94142 114940 104740 103850 96971 122810 97049 119670 102570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313630000 4705 2042 4461 8834 7175 7175 1 9606 Homo sapiens 0.0015381935463665286 DPYHGRPLTK Unmodified 1182.6146 0.61455605 4243 Q8NBJ5;M0QX72;Q8WUI9;Q9H6F1;Q6IPW8 COLGALT1;GLT25D1 Procollagen galactosyltransferase 1 yes no 0 0 1 8 0 1 35.363 35.351 4 0.015042 7598 20230619_1888_Aki_TMTPro18x_K_F8 64.878 42.138 59217 34850 51817 78446 64402 70868 70290 70665 74395 66382 98686 92385 100220 89129 43137 73893 88441 83978 54604 32285 53609 75415 66065 72153 70665 72140 76446 68128 100030 92527 99560 91216 47535 74995 84151 79672 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38932000 4706 4243 4462 8835 7176 7176 1 9606 Homo sapiens 0.03055335111844215 DQACYIFHHR Unmodified 1345.5986 0.59858841 4474 S4R369;Q9BZE1 MRPL37 39S ribosomal protein L37, mitochondrial yes no 0 0 0 7.5 0.5 1 1 36.326 36.353 4 0.00018511 7823 20230619_1887_Aki_TMTPro18x_K_F7 125.57 103.37 60239 67373 59788 66781 70031 69341 72521 81675 81762 75482 80894 84021 86769 70494 63477 77488 84348 80116 55825 61629 60963 67578 71938 70264 73285 82391 82734 76857 83287 84441 87255 73546 66183 77870 80473 76082 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99118000 4707 4474 4463 8836;8837 7177 7177 1 9606 Homo sapiens -0.0603869439673872 DQAEEEPNRIPSR Unmodified 1539.7277 0.7277479 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;A0A1U9XBD9;A0A1U9XBC3;Q14676-3;B4DYH4;Q14676-4 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 1 1.5 0.5 1 1 32.282 32.312 3 1.6951E-15 6886 20230619_1880_Aki_TMTPro18x_K_F1 183 161.44 54697 36855 42329 46558 49985 51002 46899 45417 59430 53287 52846 46937 53475 47594 47139 59578 55406 48066 50426 33848 44157 46273 51253 51122 47850 46999 59574 53269 54510 47995 54281 49685 48569 59003 52881 45802 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150440000 4708 1308 4464 8838;8839 7178 7178 1 9606 Homo sapiens -0.020526860236032007 DQAENEDGAQENTFSMDPQLER Unmodified 2523.0456 0.045589162 3619 P50570-3;P50570-2;P50570-5;P50570-4;P50570;B4DJ53;A0A024R7C9;Q9UPH5;Q8N1K8;Q6ZSZ9;B3KUU8 DNM2 Dynamin-2 yes no 0 0 0 1 0 1 50.96 50.96 3 3.0591E-31 14731 20230619_1880_Aki_TMTPro18x_K_F1 214.42 211.81 11308 9428.8 10712 11442 8887.6 13019 13805 11247 14085 12293 16886 15490 16049 13825 15926 18976 18147 15553 10453 8648.7 10915 11409 9531.1 12996 13638 11651 14425 12471 17149 15544 16403 14578 16335 18787 17323 14818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70909000 4709 3619 4465 8840 7179 7179 1 9606 Homo sapiens -0.1550118092145567 DQAENEDGAQENTFSMDPQLER Oxidation (M) 2539.0405 0.040503784 3619 P50570-3;P50570-2;P50570-5;P50570-4;P50570;B4DJ53;A0A024R7C9;Q9UPH5;Q8N1K8;Q6ZSZ9;B3KUU8 DNM2 Dynamin-2 yes no 0 1 0 1 0 1 45.205 45.205 3 6.7455E-36 12372 20230619_1880_Aki_TMTPro18x_K_F1 215 207.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4710 3619 4465 8841 7180 7180 2298 1 9606 Homo sapiens -0.16745484784041764 DQALTEEHAR Unmodified 1168.5473 0.54726434 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;B4DFY0;B3KUX9;A1L0V1;B7Z2W3;H0YJ11 ACTN1 Alpha-actinin-1 yes no 0 0 0 1 0 1 29.711 29.711 3 5.246E-14 5882 20230619_1880_Aki_TMTPro18x_K_F1 193.3 156.88 17015 10730 22225 19854 23747 24897 25291 29392 31691 18579 29499 31782 28355 23886 23998 14014 33800 29312 15751 9904.9 22154 19365 24570 24878 25619 29414 31770 19768 30327 31377 28774 24392 24960 15135 32213 27695 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35217000 4711 387 4466 8842 7181 7181 1 9606 Homo sapiens -0.0302673988976494 DQAVENILVSPVVVASSLGLVSLGGK Unmodified 2550.4269 0.42686843 346 P50454;A0A024R5K8;A8K259;B4DN87;E9PJH8;E9PPV6;E9PR70;E9PMI5;E9PK86;E9PNX1;E9PRS3;E9PIG2;E9PLA6 SERPINH1 Serpin H1 yes no 0 0 0 3.5 0.5 1 1 68.107 68.137 3 2.3717E-05 21773 20230619_1882_Aki_TMTPro18x_K_F3 79.237 72.205 0 0 767.64 1070.7 0 0 1294.8 1915.5 2108.5 806.32 918.71 0 0 1136.5 1212.8 1690.4 986.81 934.32 0 0 707.26 978.51 0 0 1255.3 1792.6 2046.9 851.36 953.75 0 0 1158.5 1202.4 1646 945.99 895.62 0 0 1 1 0 0 1 1 1 1 1 0 0 1 1 1 1 1 1972000 4712 346 4467 8843;8844 7182 7182 1 9606 Homo sapiens 0.2136720685225555 DQAVPVCPR Unmodified 1040.5073 0.50731378 3967 Q3KQU3-4;B3KU03 MAP7D1 MAP7 domain-containing protein 1 yes no 0 0 0 4 0 1 36.675 36.721 2 0.0029507 8202 20230619_1883_Aki_TMTPro18x_K_F4 114.28 85.132 49867 37395 48531 54740 59639 67101 61415 59790 67137 62475 63962 69190 66281 60753 58041 56142 75614 74567 46077 34385 49622 53987 61128 66722 61987 61661 67950 63213 65910 69601 67229 62712 60119 57535 72170 70633 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 16884000 4713 3967 4468 8845 7183;7184 7183 2 9606 Homo sapiens -0.011319580940380547 DQCEDIDECQHR Unmodified 1603.5991 0.59911827 2558 H7BZ76;B4DZD1;B4DNR7;B4DST8;C9JD84;E7EV71;B7ZLY3;Q14766-3;Q14766-2;Q14766-5;Q14766;Q14766-4 LTBP1 Latent-transforming growth factor beta-binding protein 1 yes no 0 0 0 1 0 1 30.394 30.394 3 1.8302E-05 6152 20230619_1880_Aki_TMTPro18x_K_F1 126.1 120.82 25000 14464 25135 26507 26091 26726 24432 28258 38364 27898 35414 35088 36759 38498 34231 27769 48140 38613 23075 13356 25538 25767 26992 27029 25174 28749 38135 28464 36525 35404 37419 39012 35577 28715 45860 36595 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30755000 4714 2558 4469 8846 7185 7185 1 9606 Homo sapiens -0.17853732320486415 DQCILITGESGAGK Unmodified 1447.6977 0.69769333 2174 E9PDF6;B0I1S9;O43795-2;O43795;E7EQD9;Q05CR5;C9JYW1;C9JUP5 MYO1B Unconventional myosin-Ib yes no 0 0 0 4.5 0.5 1 1 50.151 50.186 3 0.00133 14092 20230619_1883_Aki_TMTPro18x_K_F4 75.316 60.115 118520 94080 102050 114970 106800 138490 116260 105340 175120 117340 132240 145460 182750 144060 130720 175210 196860 182660 109450 86317 105210 114660 111130 137450 118420 110290 173200 119010 139930 146410 182460 150350 137720 175850 187610 173460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 315440000 4715 2174 4470 8847;8848 7186;7187 7186 2 9606 Homo sapiens -0.008247610131547845 DQDELKPGPTNR Unmodified 1368.6634 0.66335673 3876 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 1 3 0 1 36.603 36.658 3 0.00018524 8247 20230619_1882_Aki_TMTPro18x_K_F3 106.29 93.415 193040 135390 177570 198240 252040 247500 236870 224120 303610 260550 277110 236180 281870 226780 206400 250500 278720 227990 178220 124530 182900 195580 255390 246020 241660 231530 304390 260790 285370 240660 283920 235550 215420 250000 265630 216970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182900000 4716 3876 4471 8849 7188 7188 1 9606 Homo sapiens -0.0062284110972541384 DQDEMNLER Oxidation (M) 1164.4717 0.47171614 1908 A1X283;G3V144;A0A1B0GUF2 SH3PXD2B SH3 and PX domain-containing protein 2B yes no 0 1 0 1 0 1 32.197 32.197 2 0.0018216 6843 20230619_1880_Aki_TMTPro18x_K_F1 106.88 94.833 15643 13647 16158 14778 48654 44538 33320 32072 47438 28769 31479 29995 32395 26613 27558 35363 36273 35180 14475 12502 16848 15215 47504 42511 34870 33500 46856 29343 33070 30305 32816 28031 28631 35360 34614 33420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31679000 4717 1908 4472 8850 7189 7189 1224 1 9606 Homo sapiens -0.10394085132361397 DQDEMNLER Unmodified 1148.4768 0.47680152 1908 A1X283;G3V144;A0A1B0GUF2 SH3PXD2B SH3 and PX domain-containing protein 2B yes no 0 0 0 1 0 1 38.684 38.684 2 8.0542E-05 9520 20230619_1880_Aki_TMTPro18x_K_F1 160.59 130.02 28344 25424 27485 29582 63068 69382 46392 49532 67470 49315 53638 50398 54986 44409 45267 53954 61930 54892 26218 23305 28547 30034 62285 66674 48354 51907 66960 49945 55702 50935 55623 46526 47165 54093 59044 52153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38538000 4718 1908 4472 8851 7190 7190 1 9606 Homo sapiens -0.09149781269729829 DQDLASCDRDR Unmodified 1349.563 0.56299076 4715 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1;B3KSP8 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 0 0 1 1 0 1 30.005 30.005 3 7.2907E-09 5984 20230619_1880_Aki_TMTPro18x_K_F1 167.44 99.717 38273 19522 38984 52651 48382 57942 43690 45906 56743 44032 58000 56189 65840 60448 52879 31968 73664 61473 35312 18165 39769 50416 49442 57834 44736 47697 57073 45024 59765 56598 66375 60732 55015 34317 70196 58119 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77183000 4719 4715 4473 8852 7191 7191 1 9606 Homo sapiens -0.09780821435037979 DQDLEPGAPSMGAK Oxidation (M) 1430.6348 0.63475872 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 1 0 2.5 0.5 1 1 42.026 42.097 3 0.017564 10833 20230619_1881_Aki_TMTPro18x_K_F2 55.186 34.805 51168 42541 44152 53371 61383 60770 57693 54934 64072 53579 63657 68042 62227 54386 67257 55156 76128 62522 47265 39034 45743 53089 62262 60773 58566 56508 64864 54679 65320 67932 63814 56584 68717 55876 72658 59355 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 333610000 4720 3402 4474 8853;8854 7192 7192 2015 1 9606 Homo sapiens -0.06333326801177463 DQDLEPGAPSMGAK Unmodified 1414.6398 0.6398441 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 2.5 0.5 1 1 46.919 46.996 3 2.4448E-05 12755 20230619_1882_Aki_TMTPro18x_K_F3 111.07 92.24 151930 106150 129140 152940 137280 179320 154310 167160 199880 170530 193680 183170 181130 156670 186040 196790 193240 192200 140180 97619 133380 150870 142760 178910 156030 171650 200660 172610 198400 184580 185520 164580 189550 196830 184810 182600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 522830000 4721 3402 4474 8855;8856 7193 7193 1 9606 Homo sapiens -0.050890229385686325 DQDNMQAELNR Oxidation (M) 1348.5677 0.56774179 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 1 0 1 0 1 31.553 31.553 2 0.012313 6598 20230619_1880_Aki_TMTPro18x_K_F1 71.524 63.243 22357 16707 19908 25471 24560 22958 25095 23775 32719 30107 34332 32953 33075 26517 29752 32791 34101 33786 20643 15370 20527 24953 25142 23429 25501 24413 32953 30179 35079 33111 33629 27905 30569 32899 32583 32081 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32996000 4722 2727 4475 8857 7194 7194 1635 1 9606 Homo sapiens -0.0925993729226775 DQDNMQAELNR Unmodified 1332.5728 0.57282717 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 1 0 1 38.874 38.874 2 5.9524E-06 9588 20230619_1880_Aki_TMTPro18x_K_F1 156.58 144.73 43246 32772 40185 41525 40702 50516 43419 44134 55477 52786 57805 58629 58705 53283 45000 66447 71007 65712 39947 30085 41097 41331 42381 50238 44004 45756 55920 53078 59221 59093 59287 55815 47552 66455 67651 62441 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39013000 4723 2727 4475 8858 7195 7195 1 9606 Homo sapiens -0.0801563342965892 DQEALEAVK Unmodified 1001.5029 0.50293991 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 2.67 0.471 1 2 46.404 46.482 2 0.00015985 12842 20230619_1881_Aki_TMTPro18x_K_F2 145.89 88.288 29641 20514 25285 31830 26642 38438 33974 38023 47451 38503 38807 41462 46944 36674 29238 41155 50832 45009 27348 18882 26124 31278 27868 38314 34239 38868 47210 38995 40569 41788 46816 38247 31295 41465 48387 42730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132950000 4724 128 4476 8859;8860;8861 7196;7197 7196 2 9606 Homo sapiens 0.002248559640406711 DQEEEMDYAPDDVYDYK Unmodified 2123.8154 0.81536144 92 A0A024R0H6;Q8N7H5-3;Q8N7H5-2;Q8N7H5;B4DGJ5 PAF1 RNA polymerase II-associated factor 1 homolog yes no 0 0 0 1 0 1 57.226 57.226 3 0.0046471 17387 20230619_1880_Aki_TMTPro18x_K_F1 68.129 64.409 10172 8408.9 11340 12897 8279.9 12614 12836 13798 12753 14677 15142 11475 16031 14735 13281 17091 16759 18412 9415.3 7733.5 11392 12647 8985 12789 12683 14034 13097 14687 15436 11927 16212 15220 13767 17198 16013 17468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20072000 4725 92 4477 8862 7198 7198 1 9606 Homo sapiens -0.20159362516324109 DQEFTVK Unmodified 865.41815 0.41814765 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 0 3.5 0.5 1 1 45.217 45.277 2 0.019065 11836 20230619_1883_Aki_TMTPro18x_K_F4 111.17 33.885 88439 53063 61472 84883 94094 147080 98189 95426 187750 101230 129400 203680 177340 171140 95545 177020 251840 314380 81434 48895 65390 83781 95867 142640 101390 101240 183580 105380 137960 200840 175950 177980 107670 185160 239880 296910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155100000 4726 3484 4478 8863;8864 7199 7199 1 9606 Homo sapiens -0.019944697818914392 DQEGQDVLLFIDNIFR Unmodified 1920.9581 0.95814177 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W0P7 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 5 0 1 68.009 68.051 3 0.00014834 21382 20230619_1885_Aki_TMTPro18x_K_F5 74.786 63.841 1961.4 2660.2 2474.9 1623.9 1070.9 1759.5 2672.6 1245.2 2062.8 2614.8 1891.4 609.21 2684.6 2844.4 3152.1 2587.5 1467.1 2956.2 1825.1 2424.6 2446.6 1732.5 1267.1 1760.3 2580.7 1347.3 2132.1 2511.5 1977.4 789.94 2738.6 2847.6 3101.6 2626.8 1430.3 2798.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2759600 4727 3391 4479 8865 7200 7200 1 9606 Homo sapiens 0.03450102518536369 DQELSPR Unmodified 843.40865 0.4086456 3343 O95139;A0A087WZX2;O95139-2 NDUFB6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 yes no 0 0 0 1.5 0.5 1 1 32.708 32.738 2 0.046737 6802 20230619_1881_Aki_TMTPro18x_K_F2 87.696 54.181 12454 8036.9 18172 12690 23919 23719 17592 20896 20479 14807 22601 28530 17600 20689 23663 10557 25045 27779 11544 7401.8 18032 12581 24187 23078 18211 21363 20759 15712 22922 28035 18448 21054 23958 11781 23969 26192 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51460000 4728 3343 4480 8866;8867 7201 7201 1 9606 Homo sapiens -0.019322380674339 DQELYFFHELSPGSCFFLPK Unmodified 2460.146 0.1460189 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 64.269 64.294 3 0.0093152 19619 20230619_1888_Aki_TMTPro18x_K_F8 57.989 55.227 8121.1 8636.6 8304.4 7999.8 7798.8 8413.8 6261.7 7447.8 7999.7 10323 11693 11139 12877 10202 8478.4 11159 11252 13529 7524.8 7897.1 8407.9 8144.4 8101.3 8463.1 6469.1 7750.3 8210 10301 11864 11240 12889 10613 8867.3 11322 10755 12816 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 419190000 4729 2326 4481 8868;8869 7202 7202 1 9606 Homo sapiens -0.025648273391652765 DQEWYDAEIAR Unmodified 1394.6103 0.61025853 4204 Q8IVM0;Q8IVM0-2 CCDC50 Coiled-coil domain-containing protein 50 yes no 0 0 0 1.5 0.5 1 1 51.649 51.672 2 0.0058098 15059 20230619_1880_Aki_TMTPro18x_K_F1 84.605 69.633 43170 36219 43680 47192 44387 49388 50090 40746 42971 53222 55143 40316 40608 35477 62783 33486 38782 39146 39928 33246 44364 46772 46175 49578 49955 42587 44695 52714 55317 41351 42926 36672 61966 34100 37341 37120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39467000 4730 4204 4482 8870;8871 7203 7203 1 9606 Homo sapiens -0.07126218892403813 DQFGFINYEVGDSK Unmodified 1617.7311 0.73110195 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;E9PLT0;E9PNG3;Q9UG93;Q8WU01;Q9UG12 CSDE1;UNR;DKFZp586J0620;DKFZp566C233 Cold shock domain-containing protein E1 yes no 0 0 0 5 0.816 1 1 1 61.271 61.307 3 1.0223E-08 18436 20230619_1885_Aki_TMTPro18x_K_F5 154.13 140.99 201600 179540 194300 222030 156040 220580 207150 219740 246850 295000 238140 230880 301060 230730 207870 326250 276890 271900 186460 164680 197640 220710 166920 223040 207210 226490 249250 292090 247340 237360 300740 243170 217480 322910 264220 258840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 396050000 4731 88 4483 8872;8873;8874 7204 7204 1 9606 Homo sapiens -0.0530543596962616 DQFLDTLQAHGHDVNSFVR Unmodified 2198.0505 0.050479026 2356 B4E0B7;B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 6.5 0.5 1 1 53.468 53.54 4 1.8503E-24 15161 20230619_1887_Aki_TMTPro18x_K_F7 169.19 142.04 49468 42196 47248 43228 35023 53682 43712 46796 59103 54063 50640 52052 60259 52635 61012 58866 107450 64103 45737 38641 47987 43740 37733 53314 44070 48460 59005 54216 52799 52952 61315 54614 64551 59357 102060 60989 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 586370000 4732 2356 4484 8875;8876 7205 7205 1 9606 Homo sapiens -0.0006241941523512651 DQFNSHIQLVR Unmodified 1355.6946 0.69459728 237 A0A024R3D4;Q8ND24;E9PN76;Q8ND24-2 DKFZp547C195;RNF214 RING finger protein 214 yes no 0 0 0 7 0 1 43.46 43.539 3 0.0018425 10706 20230619_1887_Aki_TMTPro18x_K_F7 93.839 75.975 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4733 237 4485 8877 7206 7206 1 9606 Homo sapiens 0.03097776715026157 DQFNYKPILTK Unmodified 1365.7293 0.72925145 4484 Q9C0F1;Q9C0F1-2;D6RGX6;D6RBX1;D6RC25 CEP44 Centrosomal protein of 44 kDa yes no 0 0 1 2.5 0.5 1 1 53.309 53.351 3 0.020308 15644 20230619_1882_Aki_TMTPro18x_K_F3 64.313 46.824 176580 122180 148860 182860 137930 257400 195720 189630 273250 201820 216610 282280 272790 259180 235900 286840 282680 397350 162910 112420 153730 180470 146720 252690 196270 198770 271480 206020 227790 282020 275150 269590 243430 293780 270810 375810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 141860000 4734 4484 4486 8878;8879 7207 7207 1 9606 Homo sapiens 0.06101599803105273 DQFTTTEVNMAR Oxidation (M) 1427.6351 0.63509307 2835 Q6FH24;D3DWY7;P61758-2;P61758 VBP1 Prefoldin subunit 3 yes no 0 1 0 3 0 1 40.816 40.875 2 0.00035277 9991 20230619_1882_Aki_TMTPro18x_K_F3 107.06 97.368 33638 23179 28174 37226 27571 31475 33329 31403 41667 40424 47798 44753 44684 38032 38912 49742 45014 45427 31032 21346 29122 36333 28875 32246 33528 32352 42201 40507 48584 45034 45430 40061 40068 49526 43012 43191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41774000 4735 2835 4487 8880 7208 7208 1695 1 9606 Homo sapiens -0.06161907081309437 DQFTTTEVNMAR Unmodified 1411.6402 0.64017845 2835 Q6FH24;D3DWY7;P61758-2;P61758 VBP1 Prefoldin subunit 3 yes no 0 0 0 4 0 1 45.944 45.987 2 3.1384E-18 12151 20230619_1883_Aki_TMTPro18x_K_F4 201.46 184.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4736 2835 4487 8881 7209 7209 1 9606 Homo sapiens -0.049176032186778684 DQGEMPR Oxidation (M) 847.34942 0.34941616 4792 yes no 0 1 0 1 0 1 35.319 35.319 2 0.08334 8117 20230619_1880_Aki_TMTPro18x_K_F1 68.915 8.127 + 192940 117290 187780 232320 336320 332200 249620 288700 422560 259250 281860 251930 289810 224430 255860 161380 359440 286310 178080 108410 193640 226150 335310 327200 261910 296930 414670 263760 295860 255030 293940 229430 265900 170510 342410 270880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220960000 4737 4792 4488 8882 7210 7210 2913 1 9606 Homo sapiens -0.08036457353261994 DQGGAGEGLVR Unmodified 1057.5152 0.51523593 275;1599 A0A024R3Z1;A0A024R3Y8;Q6NYC5;P11137-4;E7EV03;A8MZ31;A0A669KB77;P11137-3;P11137;A8K5Y1;A0A024R409;Q59FX9;P11137-2 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 0 2 0 1 35.763 35.82 2 1.8234E-08 7990 20230619_1881_Aki_TMTPro18x_K_F2 174.57 142.44 97591 66431 80245 74802 77556 78906 91869 93947 131180 116620 126870 131070 139270 105550 117030 120350 147770 128060 90013 60942 82877 74976 81216 79864 93013 95520 131200 117100 130910 131500 140630 110560 121090 121140 140950 121630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157040000 4738 275;1599 4489 8883 7211 7211 1 9606 Homo sapiens -0.011221075729281438 DQGGELLSLR Unmodified 1086.5669 0.56693715 1641;1343 P12081;P12081-4;E7ETE2;A0A6Q8PHA5;A0A6Q8PFF2;Q52NV4;P12081-2;P12081-3;A0A6Q8PF47;B3KWE1;A0A6Q8PF07;A0A6Q8PFG9;A0A6Q8PFN6;A0A2R8Y6I1;A0A2R8Y3N3;B2R7G6;A0A2R8Y5P7;P49590-2;P49590;D6RJE6;A0A2R8Y4X6;A0A2R8Y5E8 HARS;HRS;HARS2 Histidine--tRNA ligase, cytoplasmic;Probable histidine--tRNA ligase, mitochondrial no no 0 0 0 4 0 1 49.4 49.435 2 3.6211E-05 13725 20230619_1883_Aki_TMTPro18x_K_F4 152.07 97.005 271410 214030 228950 282210 273670 312850 304120 282570 371050 329600 330650 351590 374130 316950 300870 402860 381600 416190 250590 196530 237140 279670 281810 313280 306790 292110 372580 331400 343130 354800 377070 332660 312260 403880 364570 395030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 293070000 4739 1641;1343 4490 8884 7212 7212 1 9606 Homo sapiens 0.027116361209891693 DQGGFGDR Unmodified 850.35694 0.35694438 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 1.5 0.5 1 1 32.208 32.238 2 0.0040726 6887 20230619_1880_Aki_TMTPro18x_K_F1 117.53 57.048 21149 12789 27773 31058 32537 44996 33253 40758 46705 30811 50387 69524 38567 44144 46869 25314 58057 65212 19575 11864 27769 30003 33516 44274 33920 41654 46866 32858 51145 67853 40218 45354 48010 28046 55490 61490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34040000 4740 3197 4491 8885;8886 7213 7213 1 9606 Homo sapiens -0.07421981761331153 DQGGFGDRNEYGSR Unmodified 1556.6604 0.66039662 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 0 1 3 0.816 1 1 1 33.451 33.511 3 8.6505E-12 7049 20230619_1881_Aki_TMTPro18x_K_F2 183.31 164.26 177970 137160 164080 170420 198310 229820 214670 200320 271160 249730 298340 259300 268210 243670 244420 310290 293430 278070 164400 125880 168420 170140 203910 227180 217180 207980 273970 250150 303180 262540 273700 255260 252040 308760 280170 264510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 671060000 4741 3197 4492 8887;8888;8889 7214;7215 7214 2 9606 Homo sapiens -0.09566716234508021 DQGINIR Unmodified 814.42972 0.42971539 1109 A0A0S2Z4Y4;A0A0S2Z5H3;Q14677;Q14677-3;Q14677-2 CLINT1 Clathrin interactor 1 yes no 0 0 0 3.5 0.5 1 1 36.871 36.921 2 0.0069009 8313 20230619_1883_Aki_TMTPro18x_K_F4 129.4 57.164 104080 69653 97406 103070 119840 133470 112060 115380 165590 111390 129420 142730 140460 110470 112380 107550 152390 139180 96076 64086 99874 101690 122630 132190 115070 119010 164050 113860 135010 142290 141660 114930 116940 109920 145330 131910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104130000 4742 1109 4493 8890;8891 7216 7216 1 9606 Homo sapiens 0.015077720320959997 DQGLSIMVSGK Unmodified 1133.5751 0.575059 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;B4DKR8;H7C0A4;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JHZ8 HDLBP Vigilin yes no 0 0 0 7.5 0.5 1 1 53.792 53.862 3 0.0028381 15291 20230619_1887_Aki_TMTPro18x_K_F7 72.958 55.932 65713 50091 66538 60740 57372 68079 69356 67943 82914 77573 77599 70600 82833 64163 69801 81179 78243 80171 60743 45962 67357 60592 60689 68274 69669 69669 83483 77684 80036 71801 83717 67338 71737 81214 74794 76151 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190100000 4743 292 4494 8892;8893 7217 7217 1 9606 Homo sapiens 0.013614470461106976 DQGSCGSCWAFGAVEAISDR Unmodified 2171.9001 0.90005132 226 P07858;E9PHZ5;A0A024R374;A8K2H4;B4DL49;A0A7P0NGZ6;A0A7I2YQK9;A0A7I2V668;E9PQM1;E9PR21;E9PSG5;A0A7I2V4Z9;E9PLY3;A0A7I2V4S6;E9PKQ7;E9PNL5 CTSB Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes no 0 0 0 4.5 0.5 1 1 62.053 62.079 3 0.001979 18861 20230619_1885_Aki_TMTPro18x_K_F5 69.72 65.477 105130 110600 131220 118660 123600 144460 136010 117050 140740 92040 98427 94906 102950 82981 185970 112900 103720 101400 97586 101260 130950 119570 129280 143520 136540 120880 141280 94565 103360 95903 108790 87574 182700 112570 100020 96443 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 360320000 4744 226 4495 8894;8895 7218;7219 7219 2 9606 Homo sapiens -0.13902270460675936 DQGSGFCITGK Unmodified 1168.5183 0.5182724 2136 Q9Y450;Q9Y450-4;B3KNB9;A8K9E1;D9YZV0;B7Z524;J3QT46;H0YES5;H0YDX7;B7Z1K2 HBS1L HBS1-like protein yes no 0 0 0 6.5 0.5 1 1 48.047 48.131 2 3.5028E-11 12712 20230619_1887_Aki_TMTPro18x_K_F7 167.2 114.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4745 2136 4496 8896;8897 7220;7221 7221 2 9606 Homo sapiens -0.05924600510434175 DQGTYEDYVEGLR Unmodified 1543.6791 0.67906638 2989 F8W1R7;P60660-2;P60660;G3V1V0;B7Z6Z4;J3KND3;G8JLA2;F8VPF3;G3V1Y7;Q6IBG5;F8W180;F8VZU9;H0YI43 MYL6 Myosin light polypeptide 6 yes no 0 0 0 2 0.816 1 1 1 53.254 53.283 2 2.9663E-36 15851 20230619_1881_Aki_TMTPro18x_K_F2 287.13 254.6 449040 347030 385000 405430 360810 481130 442990 446960 523710 582450 566720 548300 615660 511120 467520 654780 575210 617570 414580 318290 396300 405700 379810 479840 444470 462480 531020 580320 581260 557060 619720 536120 485020 653040 549610 586810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 849370000 4746 2989 4497 8898;8899;8900 7222;7223;7224 7223 3 9606 Homo sapiens -0.07102599383347297 DQHFPVFMNEK Unmodified 1390.634 0.63397086 4759 Q9Y6K1;A0A0C4DG02;Q9Y6K1-2;Q6PJ37;Q8WVA9 DNMT3A DNA (cytosine-5)-methyltransferase 3A yes no 0 0 0 6 0 1 50.557 50.634 3 0.0023615 14197 20230619_1886_Aki_TMTPro18x_K_F6 77.597 65.237 39838 19814 34042 38093 40875 64241 40100 38164 82219 46872 42733 37691 49195 35798 31955 46119 43805 51263 36702 18325 35214 37245 42155 62291 41725 41008 79702 46748 45906 38630 49172 37587 33532 46418 41849 48608 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48415000 4747 4759 4498 8901 7225 7225 1 9606 Homo sapiens -0.0457207665954229 DQHFRGDNEEQEK Unmodified 1630.6972 0.69717606 3633 P52298;P52298-3;Q7Z3W9;B4DJM2 NCBP2;DKFZp686G18222 Nuclear cap-binding protein subunit 2 yes no 0 0 1 1.5 0.5 1 1 30.985 31.018 4 0.00021462 6379 20230619_1880_Aki_TMTPro18x_K_F1 103.85 84.53 86858 2236 57453 70964 109810 29854 77716 89361 109920 87640 109850 95326 101390 89140 45490 78347 71230 89247 79604 2798.2 61551 65382 108470 34771 81211 87120 110100 88883 112120 96241 101110 91586 48853 79435 68029 84586 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115900000 4748 3633 4499 8902;8903 7226;7227 7226 2 9606 Homo sapiens -0.09294464408594649 DQHSFELDEK Unmodified 1246.5466 0.54659564 4099 Q6DD88;F5H6I7;B4DXC4;F5GWF8 ATL3 Atlastin-3 yes no 0 0 0 1.5 0.5 1 1 42.78 42.821 3 0.00042897 11353 20230619_1880_Aki_TMTPro18x_K_F1 93.345 71.299 38565 19735 35532 37477 47926 40560 43097 43204 69241 48474 48253 45359 59951 43315 42171 48964 43489 49735 35553 18246 36529 36406 48631 40845 44514 44088 68182 48665 50957 46127 59920 45090 43307 49140 41641 47207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144380000 4749 4099 4500 8904;8905 7228 7228 1 9606 Homo sapiens -0.06681579329483611 DQIAQLEASLAAAK Unmodified 1427.762 0.76200815 3482 P20700;E9PBF6;A0A0D9SFE5 LMNB1 Lamin-B1 yes no 0 0 0 7 0 1 62.706 62.741 2 1.8539E-36 19074 20230619_1887_Aki_TMTPro18x_K_F7 309 245.58 98700 71664 69782 91586 63422 112080 66208 72987 113650 114390 113410 159270 161620 155570 94339 196830 187700 225660 90980 65805 73360 91045 66976 110770 68092 78395 113170 114840 118690 159480 160460 162710 102840 198400 178950 213890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177550000 4750 3482 4501 8906 7229 7229 1 9606 Homo sapiens 0.06523762135361721 DQITAGNAAR Unmodified 1015.5047 0.50467125 3489 P22234;P22234-2;E9PBS1;B4DGX3 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 3 0.816 1 1 1 32.33 32.396 2 9.3393E-07 6499 20230619_1882_Aki_TMTPro18x_K_F3 183.72 126.54 140240 71193 159350 157570 229400 240950 149710 192070 180060 126480 220760 238740 185130 170730 210600 79631 231170 210280 129520 65989 161270 152920 230510 236030 156720 197740 183090 134810 223190 234750 191350 173600 214080 89258 220840 198420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 345680000 4751 3489 4502 8907;8908;8909 7230;7231;7232 7231 3 9606 Homo sapiens -0.002460902273469401 DQIYDIFQK Unmodified 1168.5764 0.57643921 2105 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;B4DNH2;J3KTB5;J3KSZ0;J3QL43;J3QR64;B4DKP9;J3KTN0 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 0 0 6 1 1 1 61.52 61.564 3 3.4218E-06 18459 20230619_1887_Aki_TMTPro18x_K_F7 169.92 106.5 579420 426890 498430 569210 554440 645900 594670 596550 761980 680530 584940 495740 676400 509640 581660 670180 558430 555000 534820 392140 514380 563970 573290 646020 602280 614940 759900 677980 611810 512460 682490 534080 592350 664220 534500 528370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3361399999.9999995 4752 2105 4503 8910;8911 7233;7234 7234 2 9606 Homo sapiens -0.0011059559349178016 DQIYEIFQK Unmodified 1182.5921 0.59208927 3883 Q14240;Q14240-2;E7EQG2;Q9NZE6;B4DJX6 EIF4A2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 0 0 7.5 0.5 1 1 61.399 61.432 3 0.0016903 18414 20230619_1887_Aki_TMTPro18x_K_F7 92.428 45.822 335950 279050 269670 307810 214270 300180 376980 305050 446610 437420 381760 520780 470470 516170 407280 691980 519640 634300 310170 255730 279020 308480 232020 304190 372500 315120 448550 437690 399580 524670 475360 541190 423100 688430 496890 602650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 681300000 4753 3883 4504 8912;8913 7235 7235 1 9606 Homo sapiens 0.008096909235518979 DQLASIFLACTSHK Unmodified 1589.7872 0.78717704 4710 Q9Y2R4;B3KM65;Q59H21 DDX52 Probable ATP-dependent RNA helicase DDX52 yes no 0 0 0 2 0 1 60.204 60.216 3 1.4154E-08 18727 20230619_1881_Aki_TMTPro18x_K_F2 148.03 128.7 24103 17282 26046 22983 22138 30610 22436 27389 31331 28841 24548 32590 31926 29190 25354 33890 34723 38582 22285 15877 26223 22846 23374 30278 22902 28222 31161 29191 25878 32775 32067 30468 26462 34216 33159 36582 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81980000 4754 4710 4505 8914 7236 7236 1 9606 Homo sapiens 0.015874936662385153 DQLDETVNVEPLTK Unmodified 1599.7992 0.79918151 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;O95654 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 0 0 3 0 1 55.578 55.619 2 7.6343E-14 16608 20230619_1882_Aki_TMTPro18x_K_F3 180.18 147.85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4755 1717 4506 8915 7237 7237 1 9606 Homo sapiens 0.023273888903986517 DQLLAAK Unmodified 757.4334 0.43340378 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q14917;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 6.5 0.5 1 1 46.55 46.636 2 0.037531 12039 20230619_1887_Aki_TMTPro18x_K_F7 96.492 57.7 228270 183470 225190 245230 241000 243360 243740 234670 346610 243200 265960 236910 262410 211270 240050 265530 301570 253530 211030 168490 229330 242510 249160 246070 248720 240650 343730 245390 276270 240090 266900 221690 248010 265220 287610 241100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227880000 4756 1022;3868 4507 8916;8917 7238 7238 1 9606 Homo sapiens 0.04498441805935727 DQLLLGPTYATPK Unmodified 1415.766 0.76603089 3658 P55084-2;P55084;B4DY96;B5MD38;F5GZQ3;B4DDC9 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 4.5 3.5 1 1 57.254 57.28 2;3 3.9036E-15 16672 20230619_1888_Aki_TMTPro18x_K_F8 238.98 184 104510 78653 92764 111270 106500 135860 134170 138350 152670 145520 151560 159090 170970 135130 137790 182060 176870 184010 96502 72292 95580 109970 110450 135480 134220 141310 154430 147090 156430 160130 172270 142700 143100 182170 168900 174730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 231230000 4757 3658 4508 8918;8919 7239;7240 7240 2 9606 Homo sapiens 0.0747785162902801 DQLPADECNK Unmodified 1188.5081 0.50810164 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 1.8 0.748 2 2 1 40.211 40.248 2;3 1.572E-09 9902 20230619_1881_Aki_TMTPro18x_K_F2 205.53 140.28 184360 107400 190430 196360 207510 275550 191400 241130 290640 213370 252260 365320 330070 301790 225090 219470 390150 405720 170220 99163 193270 191860 214320 271520 197110 247860 288760 221900 264650 361280 329740 309140 239770 232330 371800 383330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 511650000 4758 1488 4509 8920;8921;8922;8923;8924 7241;7242;7243 7242 3 9606 Homo sapiens -0.07861208235658523 DQLQEQLQALK Unmodified 1312.6987 0.69867961 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;A8K394;F5H4J1;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 6.5 0.5 1 1 57.501 57.563 2 4.5418E-06 16797 20230619_1887_Aki_TMTPro18x_K_F7 189.66 112 99615 85808 93629 100540 95745 108660 103410 97403 107500 119840 119490 114180 124870 111410 111610 126650 118540 127690 92096 78672 95685 100440 99515 109020 103970 100910 109840 119740 122230 116100 126670 115810 114190 127050 113410 121240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38365000 4759 349;3906 4510 8925;8926 7244;7245 7245 2 9606 Homo sapiens 0.0548382141807906 DQLQTFSEEHPVLLTEAPLNPR Unmodified 2533.2813 0.28126682 1483 A0A384NQ21;P61163;R4GMT0;B4DM97;A0A1B0GVS3;B4DXP9;B4DMT4 ACTR1A Alpha-centractin yes no 0 0 0 5.5 1.12 1 1 1 1 58.892 58.949 3;4 1.8426000000000002E-30 17449 20230619_1885_Aki_TMTPro18x_K_F5 201.64 183.82 48881 47558 53765 56590 51942 60636 56750 58467 66119 53225 57039 56878 58082 51307 62845 59597 54662 68632 45290 43591 54204 56468 54247 60955 57244 59744 66428 54207 59014 57405 59478 53554 63357 60272 52476 65040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157970000 4760 1483 4511 8927;8928;8929;8930 7246;7247;7248 7247 3 9606 Homo sapiens 0.07595744056106923 DQLRPGDESTPR Unmodified 1369.6586 0.65860571 2333 B4DYK9;B7ZMH1;B2RWN6;F5H1N7;B7ZVZ4;A0A2R8Y6P1;Q6ZU35;A0A024RD92 KIAA1211;hCG_39854 Uncharacterized protein KIAA1211 yes no 0 0 1 2 0 1 31.925 31.987 3 0.00013952 6488 20230619_1881_Aki_TMTPro18x_K_F2 109.51 93.857 29397 17712 20358 25767 24712 26297 22550 20422 30475 29855 37961 42160 37899 36375 32762 40346 44011 38536 27069 16301 21524 25345 25299 26416 23109 21544 30888 30054 38613 42040 38475 37887 34066 40363 41963 36641 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30140000 4761 2333 4512 8931 7249 7249 1 9606 Homo sapiens -0.01143725252495642 DQMQQQLNDYEQLLDVK Oxidation (M) 2122.9841 0.98409852 3482 P20700;E9PBF6;B4DZT3 LMNB1 Lamin-B1 yes no 0 1 0 4 0.816 1 1 1 61.913 61.941 3 1.4122E-05 19128 20230619_1883_Aki_TMTPro18x_K_F4 96.143 89.562 49576 35726 43641 51998 50939 57669 42072 43357 51720 55959 61997 65758 62071 55266 61681 65658 57913 79047 45762 32854 44976 51207 52142 57542 43262 45636 52586 56182 63159 65948 63332 57910 62552 66547 55593 74860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 746510000 4762 3482 4513 8932;8933;8934 7250 7250 2127 1 9606 Homo sapiens -0.03247416092062849 DQMQQQLNDYEQLLDVK Unmodified 2106.9892 0.9891839 3482 P20700;E9PBF6;B4DZT3 LMNB1 Lamin-B1 yes no 0 0 0 4 0 1 63.473 63.479 3 7.7841E-06 19797 20230619_1883_Aki_TMTPro18x_K_F4 96.805 84.639 48236 30915 39357 46130 34779 44042 41236 41713 42171 53969 54572 57533 57262 51076 53429 59292 57716 69788 44474 28453 40694 45284 36725 44613 41259 43116 43454 53971 55550 58012 58186 53341 54671 60018 55265 66130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41801000 4763 3482 4513 8935 7251 7251 1 9606 Homo sapiens -0.020031122294767556 DQMSHLFNVAHTLR Unmodified 1667.8202 0.8202085 2980 F8VPD4;P27708;Q53SY7;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 2 0 1 49.083 49.149 4 4.5527E-07 14054 20230619_1881_Aki_TMTPro18x_K_F2 139.65 126.55 15842 20271 17221 15204 14526 23095 16433 19895 24485 28807 28866 16726 26204 24822 28975 16233 29994 19882 14711 18499 17334 15901 15421 22685 16725 20753 24677 28278 29215 17814 26973 24894 29394 16704 28618 18883 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 304030000 4764 2980 4514 8936 7252 7252 1 9606 Homo sapiens 0.013011205089469513 DQMSHLFNVAHTLR Oxidation (M) 1683.8151 0.81512312 2980 F8VPD4;P27708;Q53SY7;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 1 0 8 0 1 41.198 41.193 4 8.0247E-05 10034 20230619_1888_Aki_TMTPro18x_K_F8 102.55 88.393 21047 15680 17504 23184 23885 21473 23326 21450 25287 20363 25003 20068 23016 22400 22054 24349 25607 27529 19423 14420 18201 22758 24259 21849 23604 21900 25619 20644 25547 20496 23531 23127 22652 24608 24480 26106 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43554000 4765 2980 4514 8937 7253 7253 1765 1 9606 Homo sapiens 0.0005681664633812034 DQNAEQIR Unmodified 972.46247 0.46247208 1136 B3KQF0;A0A0S2Z5M1;Q9UGP8;A0A0S2Z518 SEC63 Translocation protein SEC63 homolog yes no 0 0 0 1 0 1 30.261 30.261 2 0.0039757 6087 20230619_1880_Aki_TMTPro18x_K_F1 117.81 58.894 19350 7590.6 19702 20950 32243 29876 22834 31496 24989 17247 28917 31401 23635 25098 30371 7243.4 33159 29841 17837 7079.1 20171 20152 32202 29550 23661 31655 25457 18623 29284 30987 24642 25156 30785 8911 31676 28116 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10201000 4766 1136 4515 8938 7254 7254 1 9606 Homo sapiens -0.024860656357191147 DQNESLDEEMFYK Oxidation (M) 1662.6719 0.67193209 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;A8K6S3;A0A0U1RRM8 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 1 0 1.5 0.5 1 1 51.227 51.25 3 4.984E-06 14846 20230619_1880_Aki_TMTPro18x_K_F1 121.28 112.23 60675 44793 60142 66227 60128 78033 58549 65012 85918 77057 77780 89733 99657 78234 68425 115980 99326 122410 56066 41195 61181 65234 62563 77659 59999 67629 85669 77653 81179 90166 99527 83112 72106 116130 94895 116110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84196000 4767 385 4516 8939;8940 7255;7256 7255 238 2 9606 Homo sapiens -0.132897000461071 DQNESLDEEMFYK Unmodified 1646.677 0.67701747 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;A8K6S3;A0A0U1RRM8 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 2 0 1 56.998 57.014 3 1.8007E-08 17377 20230619_1881_Aki_TMTPro18x_K_F2 165.51 155.23 43053 34824 42811 44710 36265 48425 47319 46312 56581 58951 55859 55053 66181 60528 50829 74811 69831 74406 39805 31964 43435 44388 38559 48615 47362 47796 57116 58799 57776 56284 66539 63001 53139 74850 66662 70659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109680000 4768 385 4516 8941 7257 7257 1 9606 Homo sapiens -0.12045396183475532 DQNILLGTTYR Unmodified 1292.6725 0.67246486 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7 0.816 1 1 1 50.842 50.919 2 3.658E-05 14036 20230619_1887_Aki_TMTPro18x_K_F7 164.65 138.05 261300 211080 272880 292930 266710 295170 270560 257070 293370 337500 326700 357820 308640 240130 299870 382630 329590 358930 241690 193920 276240 289030 277600 297410 273400 267540 299180 337250 333070 358250 315030 259160 307210 380600 315260 341060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 965980000 4769 3758 4517 8942;8943;8944 7258 7258 1 9606 Homo sapiens 0.03783552246613908 DQNTVETLQR Unmodified 1202.5891 0.58912916 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 37.358 37.388 2 5.4497E-19 8586 20230619_1881_Aki_TMTPro18x_K_F2 261.16 215.03 108560 65322 96173 103100 127640 138750 135890 130190 195010 143370 150580 174370 164340 147510 132660 143730 192110 177280 100120 60180 99260 101420 130420 137350 138250 133930 193400 145260 157300 174560 165920 152840 138780 146360 183130 168080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3305899999.9999995 4770 2337;3778;3779 4518 8945;8946 7259 7259 1 9606 Homo sapiens -0.004061842012561101 DQNVFDSK Unmodified 951.42977 0.42977497 3327 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;Q71V07 HEL103;SRP72 Signal recognition particle subunit SRP72 yes no 0 0 0 3.5 0.5 1 1 45.319 45.363 2 0.00032293 11884 20230619_1883_Aki_TMTPro18x_K_F4 166.61 112 108040 67013 98975 104470 117120 122780 113890 116740 163090 134410 150470 152110 159200 132670 123020 138460 180530 165000 99680 61719 101590 102610 120190 122600 116530 120130 162780 135510 155310 152930 160530 137850 128980 140490 172070 156490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79920000 4771 3327 4519 8947;8948 7260;7261 7261 2 9606 Homo sapiens -0.047882727585715656 DQNYPGAIAIHHPNVAEK Unmodified 1972.9755 0.97552317 2782 CON__P15636 yes yes 0 0 0 5.89 1.1 1 2 4 1 1 46.697 46.769 3;4 1.1509E-09 10197 20230619_1887_Aki_TMTPro18x_K_F7 137.99 124.4 + 5563400 3979100 5797000 5851300 8004100 6491000 7329800 7626100 8821300 7005000 9051400 9369400 6919800 6864500 7700200 8354700 7822800 9130600 5142100 3659800 5900500 5764000 8103300 6545000 7475600 7694700 8902200 7184700 9185600 9320900 7173600 7236600 7827800 8413500 7492600 8659300 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 54151000000 4772 2782 4520 8949;8950;8951;8952;8953;8954;8955;8956;8957 7262;7263;7264;7265;7266;7267;7268;7269;7270;7271 7269 10 0.027954428442171775 DQQEAALVDMVNDGVEDLR Oxidation (M) 2131.9692 0.96917674 3419;2729 C7DJS2;B2C310;A0A3B6XSH2;V9HWE9;P09211;A8MX94;C7DJS1 GSTP1;HEL-S-22 Glutathione S-transferase P no no 0 1 0 1 0 1 49.755 49.755 3 4.2478E-05 14323 20230619_1880_Aki_TMTPro18x_K_F1 88.264 78.342 43875 37837 38824 40744 37885 42296 43354 45690 48478 52534 59372 53209 56510 49788 57425 59373 66752 70348 40545 34664 39857 40953 39591 42745 43577 46616 49536 52735 60244 53905 57825 51993 58904 60114 63803 66687 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37916000 4773 2729;3419 4521 8958 7272;7273 7273 1637 2 9606 Homo sapiens -0.05152907960109587 DQQEAALVDMVNDGVEDLR Unmodified 2115.9743 0.97426212 3419;2729 C7DJS2;B2C310;A0A3B6XSH2;V9HWE9;P09211;A8MX94;C7DJS1 GSTP1;HEL-S-22 Glutathione S-transferase P no no 0 0 0 2 1 1 1 63.691 63.707 3 7.384399999999999E-40 19991 20230619_1880_Aki_TMTPro18x_K_F1 261.66 244.17 47374 37594 43246 47051 44056 51275 54493 45750 47138 53230 44736 47539 51906 55985 52957 66113 55667 54158 43765 34500 44319 46789 45977 51398 54094 47346 48398 53233 46373 48821 52887 57940 54054 65575 53225 51571 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 215250000 4774 2729;3419 4521 8959;8960 7274;7275 7274 2 9606 Homo sapiens -0.03908604097478019 DQRDPMYDR Oxidation (M) 1210.5037 0.50368497 4550 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 yes yes 0 1 1 1 0 1 26.702 26.702 3 0.068572 4752 20230619_1880_Aki_TMTPro18x_K_F1 52.167 35.914 8806.6 7909 8444.3 8389.5 15042 11669 10881 12805 13166 9569.4 11139 10597 10662 10199 9535.1 11094 13607 10325 8145.4 7243.7 8700.5 8482.5 14955 11591 11284 12905 13196 9880.4 11499 10706 10857 10573 9947.6 11088 12957 9826.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6870700 4775 4550 4522 8961 7276 7276 2812 1 9606 Homo sapiens -0.09314672658570089 DQSAVVVQGLPEGVAFK Unmodified 1742.9203 0.9202997 2144;1327 A0A1W6S962;X5D7Q9;P78347-5;A0A0A0VEB4;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52 GTF2I;GTF2I-RARA General transcription factor II-I no no 0 0 0 7 0 1 60.953 60.995 2 6.0164E-05 18211 20230619_1887_Aki_TMTPro18x_K_F7 103.85 88.651 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4776 1327;2144 4523 8962 7277 7277 1 9606 Homo sapiens 0.07855636323756698 DQSGVQELVK Unmodified 1101.5666 0.5666028 4114 Q6NXE6-2;Q6NXE6;B4E1N1;Q68CW5;H0YH65 ARMC6;DKFZp762A1314 Armadillo repeat-containing protein 6 yes no 0 0 0 3.5 0.5 1 1 47.116 47.177 2 1.1636E-05 12706 20230619_1883_Aki_TMTPro18x_K_F4 185.96 132.49 59444 39352 55224 56918 56123 68300 66163 63590 80579 73537 73204 70024 88914 67247 61404 86486 90169 82126 54868 36199 56487 56171 58571 68056 66561 65549 80981 73709 76087 71190 88915 70516 64644 86280 85939 78080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54538000 4777 4114 4524 8963;8964 7278 7278 1 9606 Homo sapiens 0.01988216401127829 DQSLGNWR Unmodified 974.45699 0.45699277 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 0 0 6 0 1 42.688 42.782 2 0.0018381 10681 20230619_1886_Aki_TMTPro18x_K_F6 136.27 101.34 108260 85239 99941 101690 84506 127380 116460 128240 174160 129020 136610 160710 160400 136780 112990 143850 180510 161860 100010 78190 102050 101710 90251 126780 117350 130920 172500 131410 143050 160810 160790 142260 119610 145370 171930 153610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112150000 4778 1473 4525 8965 7279 7279 1 9606 Homo sapiens -0.03125744427529753 DQSTYISAIR Unmodified 1152.5775 0.57750184 4657 Q9UBU9;E9PIN3 NXF1 Nuclear RNA export factor 1 yes no 0 0 0 6 0 1 45.018 45.107 2 2.3249E-23 11743 20230619_1886_Aki_TMTPro18x_K_F6 213.8 141.66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4779 4657 4526 8966 7280 7280 1 9606 Homo sapiens 0.007316187753986014 DQTDDQVTIDSALATQK Unmodified 1847.8749 0.87486565 3600 Q53GL5;P48735;P48735-2;Q13584 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] yes no 0 0 0 2.33 0.471 2 1 53.611 53.651 3 2.018E-18 15790 20230619_1882_Aki_TMTPro18x_K_F3 178.14 161.2 78882 52617 55119 81040 81684 90200 90132 81346 99745 84892 103820 121730 101550 87868 110100 104460 98344 101850 72674 48436 58540 79540 83032 90274 90621 83866 101160 86740 106380 120720 104110 92580 111120 104600 94233 96751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 614750000 4780 3600 4527 8967;8968;8969 7281;7282 7282 2 9606 Homo sapiens -0.015156787199202881 DQTDFEHR Unmodified 1046.4417 0.44173664 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162;Q7KYX9;A0A0S2Z4A8;Q7Z683 PFKM;DKFZp779O048 ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 1 0 1 30.596 30.596 3 2.3102E-11 6199 20230619_1880_Aki_TMTPro18x_K_F1 234.93 206.03 63322 42502 63253 65315 83108 87771 66693 73004 89551 67719 94622 97499 79901 72342 97845 46859 111970 106090 58486 39123 64557 64341 84326 86688 68932 75448 90036 69668 96247 96690 82907 74164 99664 50978 106950 100160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 304670000 4781 116 4528 8970 7283 7283 1 9606 Homo sapiens -0.07962656015388347 DQTIVDPFSSK Unmodified 1235.6034 0.60338224 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 5.5 0.5 1 1 55.815 55.884 3 2.6014E-06 16208 20230619_1885_Aki_TMTPro18x_K_F5 149.23 121.48 111120 91218 116100 133320 111160 135340 130540 126540 157980 138510 151170 141290 149650 124930 137500 162310 136670 151100 102790 83844 117570 131130 116490 136430 131350 130240 159040 139480 155280 142850 152180 131380 140140 161810 130870 143580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 211200000 4782 4191 4529 8971;8972 7284;7285 7284 2 9606 Homo sapiens -0.004995317729708404 DQTKPTPLILDEQGR Unmodified 1709.8948 0.89481323 2241 B4DLS8;Q53GV6;B2R791;O43395;B4DM28;O43395-3 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes no 0 0 1 4.5 0.5 1 1 47.391 47.451 3 2.2619E-10 12822 20230619_1883_Aki_TMTPro18x_K_F4 149.3 123.19 173160 149880 157640 169660 177780 201530 197960 193030 221530 194720 197520 183120 207410 157900 191620 208510 192270 175160 160050 137370 161830 170170 183700 201190 199110 197820 223340 196390 204130 185670 210490 166430 195260 206820 183840 166780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 468020000 4783 2241 4530 8973;8974 7286;7287 7286 2 9606 Homo sapiens 0.06826161801313901 DQVAIHEAMEQQTISITK Unmodified 2041.015 0.015004722 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 5.5 0.5 1 1 52.719 52.794 2;4 1.1015E-29 15112 20230619_1886_Aki_TMTPro18x_K_F6 222.27 200.97 78235 54973 72003 75997 51930 78023 78281 69283 73489 95868 76082 86320 97803 69922 72930 92925 86071 91531 72230 50528 73414 75027 56385 78480 77263 72127 75382 95127 78949 87435 97862 73958 75433 92871 82263 86931 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259970000 4784 3892 4531 8975;8976 7288;7289 7289 2 9606 Homo sapiens 0.03613782012757838 DQVANSAFVER Unmodified 1234.5942 0.59421454 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 4.25 2.28 1 1 1 1 41.807 41.852 2 1.9238E-13 10641 20230619_1881_Aki_TMTPro18x_K_F2 218.15 196.4 1361600 1097400 1120300 1284500 1457500 1597100 1455000 1353400 1907500 1643200 1709000 1530800 1776300 1461500 1402100 1854800 1704600 1581800 1257100 1006400 1164300 1285800 1488500 1586000 1480400 1407200 1909300 1642900 1763900 1557900 1792900 1530600 1451500 1841100 1627100 1505700 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 9595100000 4785 3177 4532 8977;8978;8979;8980 7290;7291;7292;7293 7290 4 9606 Homo sapiens -0.0136988033864327 DQVAYLIQQNVIPPFCNLLTVK Unmodified 2572.3723 0.37233044 3093 H7C4F6;O00629;A0A7I2YQ95 KPNA4 Importin subunit alpha-3 yes no 0 0 0 5 0 2 66.406 66.449 3 0.005973 20759 20230619_1885_Aki_TMTPro18x_K_F5 60.747 50.408 4474 3538.4 4271.7 4636.6 1700.7 2353.6 1866.5 2545.6 3915 4074 6255.2 5194.7 3983.4 3508 4913.4 5529.6 5822.3 7038.5 4134.5 3248.9 4317.7 4562.4 1983.9 2557.7 1944.8 2631.9 3959.4 4068.3 6200.2 5172 4182.7 3782.3 5034.3 5605 5570.4 6664.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15852000 4786 3093 4533 8981;8982 7294;7295 7294 2 9606 Homo sapiens 0.149039164999067 DQVDIAVQELLQLK Unmodified 1610.8879 0.88793694 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 5 0 1 65.794 65.837 3 0.0014289 20544 20230619_1885_Aki_TMTPro18x_K_F5 56.527 42.018 8634.4 6347.3 6661 8323.4 7104.3 6993.8 6506.6 7273.6 8720.7 8609.6 8591 8645.1 9162.6 6471.2 8860.4 8894.1 9510.1 9035.6 7963.8 5829.6 6944.4 8223.7 7331.1 7182.2 6667.7 7448.4 8757.4 8628.9 8846.1 8700.2 9310.4 6881.7 9050.8 8906.4 9089.7 8582.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28429000 4787 3402 4534 8983 7296 7296 1 9606 Homo sapiens 0.1069284892075757 DQVTAQEIFQDNHEDGPTAK Unmodified 2242.0138 0.013818748 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 3 1.22 1 2 2 2 1 49.561 49.613 3;4 6.1906E-45 13905 20230619_1882_Aki_TMTPro18x_K_F3 250.81 234.12 763200 602580 676510 750630 684020 810580 775400 805750 908010 928000 934180 987450 1056400 882540 814870 1106500 1026400 1137300 704890 552980 695070 746670 713150 814860 780800 826680 918930 933080 962680 996260 1062900 925790 846190 1109100 980810 1079500 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 3120699999.9999995 4788 3444 4535 8984;8985;8986;8987;8988;8989;8990;8991 7297;7298;7299;7300;7301;7302;7303 7301 7 9606 Homo sapiens -0.057507608224568685 DQWAAAMTLR Unmodified 1161.5601 0.56007764 3688 P61086;P61086-2;P61086-3 UBE2K Ubiquitin-conjugating enzyme E2 K yes no 0 0 0 8 0 1 54.812 54.879 2 1.1963E-05 15656 20230619_1888_Aki_TMTPro18x_K_F8 164.64 124.29 186630 164290 178380 172790 156210 225500 193480 190150 235490 212820 171740 165710 185180 149980 200680 173410 188230 169530 172590 150470 181590 174570 165510 223140 194210 197250 235020 212530 179820 169740 189270 156560 202940 173780 180080 161130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220200000 4789 3688 4536 8992 7304 7304 1 9606 Homo sapiens -0.014240000312383927 DQYANYVVQK Unmodified 1226.5932 0.5931519 998;2590 A0A0C4DG68;B7ZL34;Q8TB72-2;Q8TB72-4;Q8TB72-3;Q8TB72;E9PR38;B4DU15;H0YEH2;Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;H0YDK8;B3KU37 PUM2;PUM1 Pumilio homolog 2;Pumilio homolog 1 no no 0 0 0 7 0 1 48.711 48.798 2 1.9433E-09 13036 20230619_1887_Aki_TMTPro18x_K_F7 202.44 153.65 66354 56787 55969 61725 62037 68156 65458 59856 74163 74468 77054 67146 85385 62562 71904 81447 86467 71911 61294 52030 57844 62027 64081 68270 66063 62129 75200 74270 79210 68390 86181 65726 74203 80986 82490 68455 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73981000 4790 998;2590 4537 8993 7305 7305 1 9606 Homo sapiens -0.011080947075470249 DQYCFECDCFR Unmodified 1598.5588 0.55883336 4524 Q9H7B4;Q9H7B4-3;B3KN46;Q9H7B4-2;A8MXR1 SMYD3 Histone-lysine N-methyltransferase SMYD3 yes no 0 0 0 3 0 1 50.572 50.643 2 4.6304E-11 14408 20230619_1882_Aki_TMTPro18x_K_F3 162.38 162.38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4791 4524 4538 8994 7306 7306 1 9606 Homo sapiens -0.21650370244628903 DQYPYLK Unmodified 925.45453 0.45453316 4102 Q6FHZ7;Q99541;B4DJK9;B4DNH6;Q5SYF3;Q5SYF5;Q5SYF4 ADFP;PLIN2 Perilipin;Perilipin-2 yes no 0 0 0 6 0 1 48.543 48.622 2 0.029387 13293 20230619_1886_Aki_TMTPro18x_K_F6 95.531 52.504 87789 76953 81499 87887 89018 92452 89615 85177 107100 111830 98604 75657 116240 78124 69597 138240 116660 83732 81164 70532 83452 87933 91876 93021 90860 88229 107870 110510 102110 78691 115770 83727 74558 134690 110930 80227 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58919000 4792 4102 4539 8995 7307 7307 1 9606 Homo sapiens -0.011175928852026118 DQYSVIFESGDR Unmodified 1414.6365 0.63647328 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q86UM1;C9JZG1;C9JQN7 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 2.5 0.5 1 1 52.903 52.949 2 1.9382E-17 15442 20230619_1882_Aki_TMTPro18x_K_F3 227.37 188.35 197930 135270 171330 194610 150730 200590 190710 183160 219230 248010 220790 228210 281600 224840 213460 287620 243660 270710 182630 124400 176130 191650 159630 201850 190870 190090 222030 246570 229120 232480 282150 235440 220340 286850 233030 257200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 221120000 4793 487 4540 8996;8997 7308;7309 7309 2 9606 Homo sapiens -0.054259497209159235 DQYVSPETVTVR Unmodified 1392.6885 0.68850885 2770 CON__ENSEMBL:ENSBTAP00000034412 yes yes 0 0 0 4 0 1 44.942 44.987 2 8.9035E-07 11709 20230619_1883_Aki_TMTPro18x_K_F4 160.67 148.44 + 26922 31959 31853 45099 47417 51321 49171 49234 66157 40619 82179 90560 53472 75851 108660 61660 101730 162010 25002 29330 32272 44510 48069 51361 49986 50245 66878 43083 82456 89168 58314 77975 108900 67915 97816 152600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59890000 4794 2770 4541 8998 7310 7310 1 0.007872136928199325 DRAGSIVLK Unmodified 957.56073 0.56072956 3245 O15511;B1ALC0;O15511-2;B3KTE1 ARPC5 Actin-related protein 2/3 complex subunit 5 yes no 0 0 1 1 0 1 40.758 40.758 3 0.0047716 10417 20230619_1880_Aki_TMTPro18x_K_F1 80.706 15.668 165390 146830 148110 160630 231520 212620 168420 190880 220010 206420 208810 193030 206600 158680 160850 257290 235190 179770 152880 134520 153140 161800 231990 210720 175120 196790 220880 207390 214480 195600 208730 169980 168990 252340 223930 171770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131320000 4795 3245 4542 8999 7311 7311 1 9606 Homo sapiens 0.08025162680121412 DRAPGAAGPPSGQIGNR Unmodified 1619.8128 0.81281494 2833 H3BNG0;H3BMU7;H3BSK2;D3DW69;H3BM86;H3BRU1;Q5XKK7-2;Q5XKK7-3;Q5XKK7 FAM219B;C15orf17 Protein FAM219B yes no 0 0 1 6.5 0.5 1 1 32.101 32.165 3 4.1736E-09 6191 20230619_1887_Aki_TMTPro18x_K_F7 129.43 115.76 15386 11188 12893 14220 16853 17627 14468 16946 18151 15352 19049 19247 15316 11836 18287 15679 18995 15805 14198 10273 13369 14155 17133 17550 14847 17309 18306 15717 19344 19110 15883 12658 18567 15711 18146 15022 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 16712000 4796 2833 4543 9000;9001 7312 7312 1 9606 Homo sapiens 0.027701042328999392 DRCTLAEK Unmodified 991.47568 0.4756793 3495 V9HWI5;P23528;G3V1A4;E9PK25;E9PP50 HEL-S-15;CFL1 Cofilin-1 yes no 0 0 1 4.5 0.5 1 1 34.156 34.226 3 0.0013804 7195 20230619_1883_Aki_TMTPro18x_K_F4 118.91 40.392 474630 223860 621080 559750 1098500 845050 648550 861510 445830 441150 676470 604340 517080 496300 619120 233130 747020 506110 438830 208070 624950 540980 1087400 833350 674770 866840 475160 472790 676090 602430 537990 501660 632520 255190 711840 478700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2270900000 4797 3495 4544 9002;9003 7313;7314 7313 2 9606 Homo sapiens -0.020399508479840733 DRDDEEAAPLLR Unmodified 1398.6739 0.67392142 1844 A0A8V8TQF3;B3KVJ8;A0A8V8TPE0;Q96RY8;H0Y2M6;P51798-2;P51798 CLCN7 Chloride channel protein;H(+)/Cl(-) exchange transporter 7 yes no 0 0 1 1 0 1 39.685 39.685 3 0.00018224 9938 20230619_1880_Aki_TMTPro18x_K_F1 81.877 50.692 108100 81115 97741 108700 115200 129330 117630 117520 158270 125600 141510 135190 149030 119890 114710 150930 155090 131970 99829 74510 100490 107750 118460 128920 119690 121080 158160 126880 146200 136370 150230 125800 119670 150020 147840 125640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52966000 4798 1844 4545 9004 7315 7315 1 9606 Homo sapiens -0.009468584552905668 DRDGYSYGSR Unmodified 1174.5003 0.50031415 1567 A0A590UJK4;A0A590UK01;A0A590UJP7;Q59GY3;A8K588;A0A590UK80;Q13247-3;Q13247;V9HVZ0;B5BU15;Q13247-2 SRSF6;HEL-S-91;SFRS6 Serine/arginine-rich splicing factor 6 yes no 0 0 1 3.5 1.12 1 1 1 1 28.942 29.022 3 0.00017093 5183 20230619_1882_Aki_TMTPro18x_K_F3 125.23 103.18 42382 33160 42873 45298 64538 61674 57353 53680 70183 56840 61533 56383 64985 48890 56727 48214 68093 57562 39182 30461 43845 44947 65067 60953 58610 55470 70406 57298 63649 56998 65789 50693 58400 49019 64968 54612 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 237030000 4799 1567 4546 9005;9006;9007;9008 7316;7317;7318 7317 3 9606 Homo sapiens -0.07995599440914702 DRDLVTEDTGVR Unmodified 1374.6739 0.67392142 3869 Q5T0F3;Q13823;B4DPI9 GNL2 Nucleolar GTP-binding protein 2 yes no 0 0 1 1.5 0.5 1 1 37.068 37.098 3 0.038783 8810 20230619_1880_Aki_TMTPro18x_K_F1 53.377 24.572 91944 65099 79720 74387 93467 99120 96439 100640 139670 83068 93453 84571 107770 87788 79690 117560 126510 99887 84853 59718 82172 74730 96155 98400 98360 102190 137820 85072 98579 86037 108260 92015 84309 116550 120400 95158 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83458000 4800 3869 4547 9009;9010 7319 7319 1 9606 Homo sapiens 0.0015714154469606 DRDPEAQFEMPYVVR Unmodified 1850.8621 0.8621329 3222 O14744;O14744-2;B2RDD7;O14744-5;O14744-3;O14744-4;B4DV00;H7BZ44;H0YJD3 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed;Protein arginine N-methyltransferase 5 yes no 0 0 1 3.5 0.5 1 1 52.316 52.36 3 6.506299999999999E-19 15081 20230619_1883_Aki_TMTPro18x_K_F4 209.13 181.49 128700 97921 120110 107310 102840 148340 130950 131770 141650 143140 140830 163340 179550 145520 126220 195620 179930 204070 118890 89764 122440 108200 109230 146430 130770 136030 143730 144680 146330 164320 179490 153390 132640 196020 171800 193640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 369520000 4801 3222 4548 9011;9012 7320 7320 1 9606 Homo sapiens -0.029263685932164663 DRDPEFYK Unmodified 1068.4876 0.4876242 4730 Q9Y3T9;B3KNC3 NOC2L Nucleolar complex protein 2 homolog yes no 0 0 1 3 0 1 40.492 40.548 3 0.022467 9848 20230619_1882_Aki_TMTPro18x_K_F3 82.645 59.409 117540 99303 104850 114810 165000 151340 138120 136940 262380 150090 161120 137890 144140 122490 127290 172000 165730 132510 108610 91040 108500 115160 165950 150030 144490 141200 255860 150900 169080 140160 146940 129430 132090 169720 157960 126400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123820000 4802 4730 4549 9013 7321 7321 1 9606 Homo sapiens -0.043880108331450174 DRDVQDETYR Unmodified 1295.5742 0.57420737 693 A0A024RBS6;F5H1S9;G8JLB3;E5KMT6;E5KMT5;Q9Y606-2;Q9Y606;F5GXL3 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial yes no 0 0 1 1 0 1 30.348 30.348 2 0.0070251 6163 20230619_1880_Aki_TMTPro18x_K_F1 94.692 77.366 2118 1100.5 2508.9 2601.5 3026.6 4533.2 2716.2 2462.2 4772.4 3225.5 4731.5 3970.3 3153.2 2699.7 2022.8 2021 3842.5 3899.4 1957 1021.2 2526 2523.9 3107.2 4383.6 2819.2 2679.1 4734.6 3247 4778 3952.3 3215.9 2793.4 2177.2 2147.1 3659.3 3683.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6274000 4803 693 4550 9014 7322 7322 1 9606 Homo sapiens -0.06175676069256042 DRDYFDYSR Unmodified 1235.5207 0.52071524 2672 B7WP74;Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog yes no 0 0 1 3 0 1 40.605 40.664 3 0.066688 9906 20230619_1882_Aki_TMTPro18x_K_F3 47.706 41.465 22142 17190 27414 26094 27780 31249 26865 31036 39158 26754 35791 32344 34406 30562 32377 29993 33487 35629 20508 15811 27406 25683 28815 31187 27536 31594 39007 27465 36790 32543 35070 31554 33007 30477 32044 33773 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16218000 4804 2672 4551 9015 7323 7323 1 9606 Homo sapiens -0.08762428781119525 DRDYSDHPSGGSYR Unmodified 1610.671 0.67096131 3564;3963 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;B3KRG5;H3BUY5;Q96E39;Q2VIN3 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 0 1 5 0 1 27.274 27.346 3 0.030861 4798 20230619_1885_Aki_TMTPro18x_K_F5 57.136 51.232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4805 3564;3963 4552 9016 7324 7324 1 9606 Homo sapiens -0.10994733580128013 DREAAEGLGSHER Unmodified 1425.6597 0.65966834 4021 Q59EF6;B4E1R7;B2RCM3 yes no 0 0 1 1.5 0.5 1 1 25.278 25.313 4 3.3466E-16 4966 20230619_1880_Aki_TMTPro18x_K_F1 191.19 169.83 31863 24125 29125 31368 41001 37693 45722 42945 64507 43374 56237 51471 47764 45821 51483 53989 64166 58150 29428 22153 30008 31170 41750 37769 46366 43518 64219 44103 57687 51735 49251 47861 52997 54350 61229 55209 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 329500000 4806 4021 4553 9017;9018 7325;7326 7325 2 9606 Homo sapiens -0.03613510883587878 DREDFVPFTGEK Unmodified 1438.6729 0.67285879 2139 A8K9L8;Q9NZR1;Q4G0W6;G5EA42;Q9NZR1-2 TMOD2 Tropomodulin-2 yes no 0 0 1 4 0 1 49.719 49.754 3 0.00015667 13843 20230619_1883_Aki_TMTPro18x_K_F4 109.07 64.308 118800 107690 126420 130720 95469 113840 123350 120330 141310 153360 164480 179920 186270 165390 173200 173280 179320 212770 109980 98754 127350 129940 102420 116550 123380 123430 143910 154010 168740 180890 188830 171520 176700 176220 171750 201550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133360000 4807 2139 4554 9019 7327 7327 1 9606 Homo sapiens -0.028930728241903125 DREDLVPYTGEK Unmodified 1420.6834 0.68342347 3518 P28289 TMOD1 Tropomodulin-1 yes yes 0 0 1 3.5 0.5 1 1 44.846 44.904 3 7.3155E-05 11796 20230619_1882_Aki_TMTPro18x_K_F3 117.2 94.972 427990 342090 443400 545480 467040 504320 512020 508300 616230 572020 630370 603080 709270 557770 467260 610250 704520 661000 395820 314800 450120 533230 484430 512980 516910 520900 622370 575760 649000 609400 709750 579940 493240 614850 671480 627450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 401930000 4808 3518 4555 9020;9021 7328;7329 7328 2 9606 Homo sapiens -0.010090901697822119 DREDYVPYTGEK Unmodified 1470.6627 0.66268803 4034 Q5HYL6;Q9NYL9 DKFZp686E1899;TMOD3 Tropomodulin-3 yes no 0 0 1 3.5 0.5 1 1 42.788 42.843 3 3.838E-05 10835 20230619_1882_Aki_TMTPro18x_K_F3 120.59 99.031 233890 188510 226370 234070 301760 292250 307000 307390 364850 302710 365130 317520 337800 277910 332470 351140 346190 337010 216190 172980 231750 233450 307360 291550 310950 312760 368140 306720 373100 320640 345310 291870 339040 350860 331040 320280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 125930000 4809 4034 4556 9022;9023 7330;7331 7330 2 9606 Homo sapiens -0.05381680549453449 DREEALHQFR Unmodified 1299.632 0.63199703 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;Q5S4N1;B4E132;A0A0J9YVQ7;A0A087WVZ1 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 1 3.5 1.12 1 1 1 1 32.289 32.359 4 0.00026898 6484 20230619_1882_Aki_TMTPro18x_K_F3 128.01 83.706 185100 143350 169630 191750 213630 231110 195230 205460 279680 216080 216390 197950 232890 179280 181160 249070 234010 224080 170980 131660 174380 190110 218080 230100 200490 211890 277500 217430 225500 201310 234670 189310 188410 247560 223320 213140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 650860000 4810 1018 4557 9024;9025;9026;9027 7332;7333 7332 2 9606 Homo sapiens -0.005833693531712925 DREEDEEDAYER Unmodified 1554.607 0.60702365 3611 P49756;Q16083 RBM25 RNA-binding protein 25 yes no 0 0 1 1 0 1 31.283 31.283 3 1.7004E-06 6513 20230619_1880_Aki_TMTPro18x_K_F1 145 132.73 54689 28173 46165 67241 58549 69876 63549 60441 93721 80102 91151 107140 96741 96084 65943 104840 107670 117820 50387 26147 47932 64610 60087 70158 64680 62964 93617 80780 93938 107130 97233 99875 70118 105820 102680 111730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222830000 4811 3611 4558 9028 7334 7334 1 9606 Homo sapiens -0.1480955852769057 DREEDEEDAYERR Unmodified 1710.7081 0.70813467 3611 P49756;Q16083 RBM25 RNA-binding protein 25 yes no 0 0 2 1 0 2 29.347 29.347 3;4 1.324E-05 5735 20230619_1880_Aki_TMTPro18x_K_F1 130.24 98.168 10306 7555.6 12067 11954 18424 16407 15059 12184 15884 14531 17247 14290 14167 13933 17692 11481 14935 12830 9537 6954.8 12202 11760 18506 16162 15397 12808 16187 14563 17485 14506 14732 14249 17741 11677 14301 12180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47556000 4812 3611 4559 9029;9030 7335;7336 7335 2 9606 Homo sapiens -0.11879106824994778 DREGFFTNGLTLGAK Unmodified 1624.8209 0.82092001 2552;2741 C9J0J7;G5E9Q6;B4DNH1;D3DNI2;P35080-2;D3DNI3;C9JQ45;C9J712;P35080;C9J2N0 PFN2 Profilin;Profilin-2 no no 0 0 1 1.5 0.5 1 1 55.298 55.308 3 5.1623E-14 16528 20230619_1880_Aki_TMTPro18x_K_F1 181.51 150.12 140610 116370 136360 159850 125290 162490 123810 129820 152560 143240 156780 154620 151520 142130 177960 156770 152980 178520 130000 106890 138850 157800 131230 163280 125900 135290 153940 144450 160480 156050 156120 147770 179010 158600 146790 169240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 343560000 4813 2552;2741 4560 9031;9032 7337 7337 1 9606 Homo sapiens 0.033502384296525634 DRELDLR Unmodified 915.47739 0.47739386 3422 Q53G61;Q53G21;P09661;H0YKK0;Q6NVW9;Q9UEN1;O95485 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 1 2.5 0.5 1 1 34.462 34.521 3 0.009098 7469 20230619_1881_Aki_TMTPro18x_K_F2 96.711 7.4122 394350 309820 362280 376830 497860 485920 435040 458700 657350 494570 549430 516300 510030 464870 470270 594040 597960 542670 364310 284260 372720 376510 504720 482640 449040 471250 652290 498990 566710 521750 520320 487820 486630 591660 570510 516180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 453270000 4814 3422 4561 9033;9034 7338 7338 1 9606 Homo sapiens 0.016274262322781397 DREPYFDR Unmodified 1096.4938 0.49377221 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1;F8VU51;H0YI23;B4DMQ9 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 1 2 0 1 35.269 35.326 3 0.00083712 7803 20230619_1881_Aki_TMTPro18x_K_F2 134.25 97.852 64089 50902 53149 71365 80514 86312 75338 77863 129640 84576 93036 85295 85260 77145 71892 82167 101080 93004 59167 46770 55425 70531 81442 85936 77870 80292 127380 85260 96738 86296 86709 80113 75003 83071 96373 88250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62853000 4815 3610 4562 9035 7339 7339 1 9606 Homo sapiens -0.05061492601635109 DREVAEGGLPR Unmodified 1197.6102 0.61019895 4440 Q9BUA3;H0YGK9;H0YGY5 C11orf84 Uncharacterized protein C11orf84 yes no 0 0 1 2.5 0.5 1 1 33.905 33.966 3 0.00016382 7251 20230619_1881_Aki_TMTPro18x_K_F2 107.09 65.091 39184 27969 35101 43277 46670 45691 39300 44077 56672 46619 56109 51126 48180 44308 44858 53804 53491 56393 36172 25741 36208 42447 47362 45980 40600 45202 56688 47137 57200 51500 49297 46419 46202 54033 51116 53524 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47483000 4816 4440 4563 9036;9037 7340 7340 1 9606 Homo sapiens 0.01929825898287163 DREVGIPPEQSLETAK Unmodified 1767.9003 0.90029254 622 P61158;A0A024RAI1;Q59FV6;B4DXW1;B4DTI0 ACTR3 Actin-related protein 3 yes no 0 0 1 3.5 0.5 1 1 45.589 45.665 3 4.3708E-06 12062 20230619_1883_Aki_TMTPro18x_K_F4 111.39 86.453 53396 55215 63464 67693 79107 105070 76051 78016 91176 92054 85563 94485 98766 81281 75621 90730 103390 101170 49532 50616 63921 67797 80981 102740 77325 81907 91872 92379 88665 95303 99292 84813 78915 91566 98641 95990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84957000 4817 622 4564 9038;9039 7341;7342 7342 2 9606 Homo sapiens 0.04705840593146604 DRFTDILVR Unmodified 1133.6193 0.61930707 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 1 7.5 0.5 1 1 48.173 48.245 3 0.00025454 12794 20230619_1888_Aki_TMTPro18x_K_F8 127.76 84.253 179920 178490 138700 155150 138830 185440 132020 162690 308750 240500 192790 267740 298490 289920 141280 432580 384090 447180 166280 163170 144430 159130 144780 184790 138940 169750 299930 240040 208110 271430 294460 305740 161460 432220 365580 424350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 224240000 4818 3246 4565 9040;9041 7343;7344 7344 2 9606 Homo sapiens 0.05784219254633172 DRFVGQSEGK Unmodified 1121.5465 0.54653606 4613 Q9NWH9;H7C3F4;A0A024R5U7;A0A024R5X3;Q9NWH9-3;H0YMM0 SLTM SAFB-like transcription modulator yes no 0 0 1 5 0 1 35.954 36.046 3 0.00018821 7914 20230619_1885_Aki_TMTPro18x_K_F5 107.97 87.132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4819 4613 4566 9042 7345 7345 1 9606 Homo sapiens -0.009375345387979905 DRFVNDYDK Unmodified 1170.5306 0.53055165 3884 Q14257;Q14257-2;A8MXP8 RCN2 Reticulocalbin-2 yes no 0 0 1 3.5 0.5 1 1 40.851 40.902 3 0.0032989 9988 20230619_1882_Aki_TMTPro18x_K_F3 87.667 62.876 246890 209600 227470 246100 338640 317470 284930 293020 538320 305960 361900 306660 299370 252300 324430 323310 388350 319460 228200 192190 234400 246480 341640 315230 297970 301280 526170 309100 376420 309700 308880 265820 332950 323560 370480 303720 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 262250000 4820 3884 4567 9043;9044 7346;7347;7348 7346 3 9606 Homo sapiens -0.04789240775721737 DRGFELTFK Unmodified 1111.5662 0.56620887 619 A0A0C4DGS1;A0A024RAD5;P39656;P39656-3;U3KQ84 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 1 5.33 3.09 1 1 1 51.307 51.358 3 0.020666 14204 20230619_1887_Aki_TMTPro18x_K_F7 66.595 26.594 126590 96299 93606 126870 99562 132730 109810 121500 176350 146940 152650 182820 189140 156320 120420 217680 183370 213880 116750 88437 98144 125610 103620 133440 112170 125590 174880 148320 159420 183090 188660 165350 127690 217230 175050 203070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 568470000 4821 619 4568 9045;9046;9047 7349;7350 7350 2 9606 Homo sapiens 0.014888414719507637 DRGFEYDGK Unmodified 1085.4778 0.47778779 2141 A8K9T8;Q9BYT8;B3KU23;E9PCB6;Q9BQD0;H0YAK4;Q96K48 NLN Neurolysin, mitochondrial yes no 0 0 1 3.5 0.5 1 1 40.064 40.113 3 0.030404 9665 20230619_1882_Aki_TMTPro18x_K_F3 62.408 39.668 201340 156710 180430 196420 249590 213150 231300 211000 320280 242760 282660 263490 243250 223130 217350 283580 307220 270100 185960 143830 186090 195320 253000 214400 236890 216620 319450 244460 289850 265330 248520 234580 226790 283060 292820 256820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 311970000 4822 2141 4569 9048;9049 7351 7351 1 9606 Homo sapiens -0.06153198838546814 DRGLLEDER Unmodified 1101.5415 0.54145068 1902 A1L020 MEX3A RNA-binding protein MEX3A yes yes 0 0 1 1.5 0.5 1 1 35.135 35.163 3 0.0024777 8046 20230619_1880_Aki_TMTPro18x_K_F1 91.549 45.548 68041 52328 64174 68442 89207 90722 81805 81371 108180 79294 88198 87313 83034 70686 75723 88577 100620 88242 62862 48050 65909 68071 90471 89840 83692 83704 107830 80555 91186 87735 84602 74402 78568 88670 95946 83861 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69084000 4823 1902 4570 9050;9051 7352 7352 1 9606 Homo sapiens -0.005258384014496187 DRGLTEFPADLQK Unmodified 1488.7573 0.75725712 584 H3BSW0;A0A024R9M3;A0A3B3ISV5;Q8N9N7 LRRC57 Leucine-rich repeat-containing protein 57 yes no 0 0 1 6 0 1 50.654 50.731 3 4.6616E-05 14238 20230619_1886_Aki_TMTPro18x_K_F6 115.34 63.095 70661 61367 67950 75615 63012 61765 76559 67396 89976 73931 73302 61833 72743 66791 72556 80024 72428 77536 65343 56290 69217 75020 66160 63673 76798 68690 90190 74047 75902 63550 74290 69425 73821 80045 69335 73652 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33367000 4824 584 4571 9052 7353 7353 1 9606 Homo sapiens 0.03242877992556714 DRIEIFPSR Unmodified 1131.6037 0.60365701 384 Q9H3H0;A0A024R683;Q9Y5K8;Q8N5Z9;Q9NW63;G3V2V6;G3V559;Q6PJ05;G3V3T8;G3V341 VATD;ATP6V1D V-type proton ATPase subunit D yes no 0 0 1 6.5 0.5 1 1 44.533 44.619 3 0.0047059 11241 20230619_1887_Aki_TMTPro18x_K_F7 81.017 52.059 135910 111680 130590 137780 154350 167050 155420 156180 236520 149060 167170 151410 172400 135780 149670 159430 176810 183230 125640 102460 133500 137380 158610 166450 159070 160090 233300 151310 174850 153170 174680 141930 154140 161130 168960 173750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106350000 4825 384 4572 9053;9054 7354 7354 1 9606 Homo sapiens 0.04311932737573443 DRIEITSLLPSR Unmodified 1398.7831 0.78307794 1900 A0PJK4;B3KTT0;Q8NFH3;Q8TEA6;Q8NFH3-2 NUP43 Nucleoporin Nup43 yes no 0 0 1 1 0 1 53.292 53.292 3 0.0031713 15779 20230619_1880_Aki_TMTPro18x_K_F1 66.215 48.484 34252 37018 33649 43140 37793 48263 36999 50700 60953 44283 38637 61359 50524 50840 35024 59338 48741 58185 31730 33913 34357 43128 39009 48454 38105 51421 59830 45640 41342 61100 50532 53182 36783 59359 46568 55242 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118830000 4826 1900 4573 9055 7355 7355 1 9606 Homo sapiens 0.09963772234846147 DRIPEER Unmodified 913.46174 0.4617438 1959 E7EW84;A5YP36;B4DEZ1;B3KXY5;B7Z6G5;Q8TAG9-2;Q8TAG9;Q9NTA6;B2RDH5 EXOC6;SEC15L3;DKFZp761I2124 Exocyst complex component 6 yes no 0 0 1 1 0 1 28.959 28.959 3 0.01676 5602 20230619_1880_Aki_TMTPro18x_K_F1 84.476 55.327 17327 11368 19839 19431 25642 24486 19296 21747 33551 20619 28315 32663 26544 25600 22523 15508 31629 27997 16021 10480 20021 19015 25998 24311 20269 22374 33115 21293 29237 32334 26986 26102 23433 16476 30149 26473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9072200 4827 1959 4574 9056 7356 7356 1 9606 Homo sapiens 0.0015513971522977954 DRLEFWCTDVK Unmodified 1467.6816 0.68164933 179 Q53GN6;A0A024R201;Q9UNM6;J3KNQ3;B2RBM7;Q9UNM6-2;B4DJ66;H0YD73 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 1 6.5 0.5 1 1 54.536 54.606 3 0.001909 15587 20230619_1887_Aki_TMTPro18x_K_F7 77.26 65.341 88337 74175 72491 91041 78795 94488 89900 91469 130640 115380 86351 79256 105090 84331 89142 117630 96932 102430 81575 68044 75177 90580 81818 95205 91211 94269 129060 114290 91435 82299 105900 88627 91517 116730 92707 97429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 337940000 4828 179 4575 9057;9058 7357 7357 1 9606 Homo sapiens -0.033484224594076295 DRLEHMLK Unmodified 1040.5437 0.54369929 1793 Q96I59;A0A8Q3SHT5;B3KPX5;A0A8Q3SHL5;A0A8Q3SIK4;A0A8Q3WKF4;B2RD66;A0A8Q3WKI6;A0A8Q3SHT7;A0A8Q3WLI0;H0YE96;A0A8Q3WKD2;Q96I59-2;Q9H5H1;A0A8Q3SHN6 NARS2 Probable asparagine--tRNA ligase, mitochondrial yes no 0 0 1 7 0 1 41.129 41.198 4 0.068179 9737 20230619_1887_Aki_TMTPro18x_K_F7 64.04 25.954 66978 62668 60599 68924 81020 88095 79461 75428 115560 55920 56936 39369 47387 36598 70912 52170 51963 47662 61939 57406 62451 69345 82568 87352 81243 77409 113140 57199 60676 40713 49771 38697 70544 51982 49871 45333 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31898000 4829 1793 4576 9059 7358 7358 1 9606 Homo sapiens 0.025049188026514457 DRLEQLER Unmodified 1057.5516 0.55162144 1016 A0A0D9SEN2;P21127-3;A0A0D9SER5;A0A0D9SEI3;B4E3D9;P21127-2;P21127-8;P21127;Q9UQ88-3;Q9UQ88-4;Q9UQ88-2;P21127-9;P21127-6;Q5QPR3;Q9UQ88;Q5QPR4;B4E0M9;B4E0N4;Q9UQ88-9;E7ESP2;J3KS35;Q6PK02;Q05C84;Q59GL4 CDK11B;CDK11A;CDC2L1;CDC2L2 Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A yes no 0 0 1 2 0 1 35.866 35.922 3 0.00076211 8042 20230619_1881_Aki_TMTPro18x_K_F2 135.71 85.008 88261 69897 81846 91829 112460 132520 109960 115800 190270 111750 108960 101200 108910 92811 98804 110980 117920 112400 81547 64178 84218 91431 114570 130480 113390 119270 185810 113040 115530 102970 110740 96994 101770 111280 112600 106760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82035000 4830 1016 4577 9060 7359 7359 1 9606 Homo sapiens 0.025147693238068314 DRLHTIR Unmodified 909.51445 0.51444807 255 B4DTV1;B4E3I5;A0A024R3N3;A0A140VJE9;Q06481-5;Q06481-4;Q06481-2;Q06481-3;Q06481-6;Q06481;B4DKY3 APLP2 Amyloid-like protein 2 yes no 0 0 1 8 0 1 23.234 23.276 3 0.07169 3852 20230619_1888_Aki_TMTPro18x_K_F8 58.917 30.811 18100 12550 15504 20804 20094 21571 17611 16586 26756 18124 21820 16956 20214 17033 18658 20678 22767 19251 16701 11562 16064 20316 20463 21632 18175 17341 26512 18228 22511 17295 20613 17761 19237 20637 21719 18313 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3459100 4831 255 4578 9061 7360 7360 1 9606 Homo sapiens 0.056071425687036935 DRNCLDPFTSR Unmodified 1379.6252 0.62519709 4567 Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3;E9PI04;E9PSI0 RIC8A Synembryn-A yes no 0 0 1 6 0 1 42.395 42.489 3 0.0066432 10545 20230619_1886_Aki_TMTPro18x_K_F6 87.026 69.294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4832 4567 4579 9062 7361 7361 1 9606 Homo sapiens -0.04943050296037654 DRNLQEGNLER Unmodified 1342.6589 0.65894006 3852 Q13445;K7EIN4;K7EQ63 TMED1 Transmembrane emp24 domain-containing protein 1 yes no 0 0 1 2 0 1 32.093 32.154 3 0.00010674 6556 20230619_1881_Aki_TMTPro18x_K_F2 122.42 86.778 27835 20679 23680 26453 40402 33294 38637 35499 43745 36823 37019 45916 38685 31382 34470 45908 49056 42869 25691 18987 24662 26331 40516 33225 39184 36150 44003 37420 38431 45690 39243 33610 35991 45694 46752 40772 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51667000 4833 3852 4580 9063 7362 7362 1 9606 Homo sapiens 0.0013169446735901147 DRPAMQLYQPGAR Oxidation (M) 1517.7409 0.74089555 2405 B3KSJ3;Q9BZI7-2;Q9BZI7 UPF3B Regulator of nonsense transcripts 3B yes no 0 1 1 8 0 1 34.791 34.783 3 0.00064735 7401 20230619_1888_Aki_TMTPro18x_K_F8 93.623 74.838 18993 15647 20798 20863 20693 26480 23752 24048 26973 22047 28553 28329 26677 22852 23784 26121 28434 29216 17577 14367 20983 20712 21609 26279 23876 24681 27330 22587 29134 28298 27152 23925 24506 26364 27166 27714 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34846000 4834 2405 4581 9064 7363 7363 1482 1 9606 Homo sapiens 0.002734735548074241 DRPASGSPFQLFLSK Unmodified 1648.8573 0.85730551 809 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2;B4E0F9;A0A087WWG9 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 0 0 1 4.5 0.5 1 1 60.1 60.102 3 3.9939E-07 18367 20230619_1883_Aki_TMTPro18x_K_F4 121.23 93.143 68987 53427 54189 60331 40485 67742 51929 51515 80102 90355 69872 59857 91934 65512 55803 104160 72689 67292 63656 48986 56128 60454 43725 67531 52574 54773 79705 88338 73010 62398 91342 69465 58581 101840 69347 64324 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83982000 4835 809 4582 9065;9066 7364;7365 7364 2 9606 Homo sapiens 0.05883115326355437 DRPFFAGLVK Unmodified 1148.6342 0.63422886 3490;1446 A0A384MTW7;P15531;P15531-2;E7ERL0;E5RHP0;Q32Q12;P22392-2;J3KPD9 NME1;NME1-NME2;NME2 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 0 1 3.5 0.5 1 1 54.236 54.267 3 1.1705E-05 15868 20230619_1883_Aki_TMTPro18x_K_F4 155 79.708 1949700 2192900 1859900 1564200 1980900 2749100 1583800 1770600 2122600 598870 507800 347590 407930 315160 1261100 409940 365390 305620 1806400 2001300 1897000 1649400 2043300 2668200 1636900 1844000 2063300 664120 593280 364520 459770 331430 1213200 407390 357850 291600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 10218000000 4836 1446;3490 4583 9067;9068 7366;7367;7368 7368 3 9606 Homo sapiens 0.06585711122625071 DRPFFPGLVK Unmodified 1174.6499 0.64987892 3490;3276 O60361;Q32Q12;P22392-2;J3KPD9;Q6FHN3;P22392;F6XY72 NME2P1;NME1-NME2;NME2 Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 0 1 3 0.816 1 1 1 53.84 53.872 3 7.6503E-05 15693 20230619_1883_Aki_TMTPro18x_K_F4 137.89 89.957 4605200 4127500 4204900 3993600 4280000 5082800 3053000 4583600 3448200 2243900 1899000 1036600 1578300 1159800 3642800 1589000 1494100 975360 4257800 3777400 4303200 4061800 4411900 5046500 3168200 4649200 3427900 2357500 2005900 1115900 1716400 1216200 3537800 1562400 1446700 934810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7253599999.999999 4837 3276;3490 4584 9069;9070;9071 7369;7370 7370 2 9606 Homo sapiens 0.06953997639629961 DRPHEGTRPVR Unmodified 1318.6854 0.68542958 373 A0A024R611;P31146;Q59G88;H3BRY3;H3BTU6;H3BRJ0;Q6ZW98 CORO1A Coronin;Coronin-1A yes no 0 0 2 5.5 0.5 1 1 22.993 23.047 4 0.0013959 3779 20230619_1885_Aki_TMTPro18x_K_F5 92.866 21.643 31772 20266 31548 28877 38928 35286 31543 25694 40468 33940 46312 47114 37243 30648 37223 29102 45227 39699 29336 18642 32146 28530 39609 34993 32507 27160 40918 34276 46844 46641 38292 32085 38244 29894 43158 37614 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105720000 4838 373 4585 9072;9073 7371 7371 1 9606 Homo sapiens 0.038834281493336675 DRPVSQPSLVGSK Unmodified 1368.7361 0.73612775 2828 Q9H4A3-7;Q9H4A3;D3DUP1;F5GWT4;D3DUP2;Q9H4A3-6;Q9H4A3-2;Q9H4A3-5;F6UYG0 WNK1 Serine/threonine-protein kinase WNK1 yes no 0 0 1 8 0 1 39.938 39.928 3 4.8559E-05 9447 20230619_1888_Aki_TMTPro18x_K_F8 115.04 83.852 71446 45292 61737 77392 69407 83055 71024 73373 101130 79630 85118 91667 98740 82179 76401 100770 111000 114880 65897 41761 63737 75514 71662 83269 72438 75809 100640 80571 88693 92205 99317 86094 80125 101670 105900 108950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18998000 4839 2828 4586 9074 7372 7372 1 9606 Homo sapiens 0.06650912683676324 DRPYDYK Unmodified 955.43995 0.43994572 4500 Q9H2G2;Q9H2G2-2;B4DZC9 SLK STE20-like serine/threonine-protein kinase yes no 0 0 1 5 0 1 37.018 37.11 3 0.015048 8332 20230619_1885_Aki_TMTPro18x_K_F5 96.027 35.055 72462 47259 61127 73395 118290 119800 85988 78846 149060 94499 103940 91267 98628 76152 94435 84844 118040 92154 66832 43513 63957 72484 117550 116670 90412 83782 146340 94747 108410 92297 100620 79568 97335 85569 112530 87546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57829000 4840 4500 4587 9075 7373 7373 1 9606 Homo sapiens -0.039556650333452126 DRQHGPVVELNR Unmodified 1418.7379 0.73785908 1043 A0A0J9YVP0;O95714 HERC2 E3 ubiquitin-protein ligase HERC2 yes no 0 0 1 5 0 1 30.754 30.831 4 0.0030953 5969 20230619_1885_Aki_TMTPro18x_K_F5 85.42 46.154 16317 8876.5 14699 16925 22088 19875 17711 20846 17044 15840 25892 27141 23631 22206 17816 15572 22358 24936 15044 8204 15184 16455 22205 19892 18107 21091 17740 16613 26049 26864 23922 22713 18457 16291 21366 23576 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9324600 4841 1043 4588 9076 7374 7374 1 9606 Homo sapiens 0.04523966492342879 DRQQLYK Unmodified 949.49813 0.49812931 958 A0A0A0MSZ9;Q05048;A3KFI9;A0A087WV92 CSTF1 Cleavage stimulation factor subunit 1 yes no 0 0 1 7.5 0.5 1 1 34.756 34.79 3 0.015637 7423 20230619_1888_Aki_TMTPro18x_K_F8 90.37 57.76 101310 61582 110010 115200 147680 169940 134630 141860 175700 119520 167120 178810 162270 148950 141250 96062 211710 189300 93598 56867 111650 112530 150160 166910 137760 146230 176090 123910 171700 177680 164920 151890 147610 102770 201730 178890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81206000 4842 958 4589 9077;9078 7375;7376 7376 2 9606 Homo sapiens 0.021360166119507085 DRRPVHLDQAAFR Unmodified 1579.8332 0.83315645 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 0 2 1 0 1 32.894 32.894 4 1.0271E-07 7135 20230619_1880_Aki_TMTPro18x_K_F1 155.43 112.13 38665 30365 42618 43402 44385 48165 52499 50671 55326 41149 42134 33719 42512 36482 40722 46640 47962 41185 35774 27908 43003 42819 46154 48385 52538 51336 55633 41899 43818 34722 43310 38079 41870 46385 45773 39200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74568000 4843 2350 4590 9079 7377 7377 1 9606 Homo sapiens 0.06643319683371374 DRSEEEFER Unmodified 1195.5105 0.51054449 250 A0A024R3K9;A0A024R3N2;Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59;B4DSL1 NFRKB Nuclear factor related to kappa-B-binding protein yes no 0 0 1 1 0 1 30.803 30.803 3 0.00014456 6310 20230619_1880_Aki_TMTPro18x_K_F1 137.98 106.55 27241 22986 21966 26640 28860 29134 29675 26987 31124 29433 34714 35178 31232 32018 30606 35854 39003 32922 25153 21074 22884 26634 29442 29235 29910 27797 31759 29797 35302 35353 32002 33298 31624 35795 37194 31323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15485000 4844 250 4591 9080 7378 7378 1 9606 Homo sapiens -0.07939036506331831 DRTGFAVIHDAAR Unmodified 1427.727 0.72696004 3584 P42773;Q6ICV4 CDKN2C Cyclin-dependent kinase 4 inhibitor C yes no 0 0 1 6.5 0.5 1 1 36.763 36.831 4 0.00015505 7992 20230619_1887_Aki_TMTPro18x_K_F7 109.07 83.687 55690 46543 54239 48136 60199 55813 53322 58320 61197 54607 63739 52921 62852 52534 54362 57358 69858 61180 51491 42629 55250 48632 61801 55964 54444 59281 61986 55345 65156 53842 63777 54475 56295 57772 66630 58101 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87621000 4845 3584 4592 9081;9082 7379 7379 1 9606 Homo sapiens 0.030205641180373277 DRTQEFLSACK Unmodified 1353.6347 0.63469914 2941 E9PP18;E9PRW9;E9PNU4;Q13190-3;Q13190-2;Q13190-4;Q13190 STX5 Syntaxin-5 yes no 0 0 1 7 0 1 43.265 43.344 3 0.0073324 10657 20230619_1887_Aki_TMTPro18x_K_F7 81.709 52.41 36326 29822 37027 39424 40288 45193 44480 48067 57669 41613 48837 50089 49921 39315 43669 55854 60873 65621 33596 27380 37624 39101 41724 45315 45012 48722 57589 42678 50570 50134 50623 41811 45533 56360 58110 62206 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37570000 4846 2941 4593 9083 7380 7380 1 9606 Homo sapiens -0.02797282010510571 DRVALSNMNVIDR Oxidation (M) 1517.762 0.76202492 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;B3KU93;A0A8V8TQ95;B3KTP2;A6NEC2;E9PPZ2;B7Z6T6;A0A7I2V604 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 1 1 5.5 0.5 1 1 38.66 38.747 3 0.018333 9017 20230619_1886_Aki_TMTPro18x_K_F6 65.895 42.717 31434 25118 32112 35385 42719 40915 37554 41741 45161 31218 40111 38205 37970 35794 38128 40143 39367 39605 29067 23080 32735 34954 43353 40975 38407 42293 45326 32350 41289 38422 38854 37208 38848 40239 37656 37622 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49866000 4847 2933 4594 9084;9085 7381 7381 1745 1 9606 Homo sapiens 0.023854388636664225 DRVEISPEQLSAASTEAER Unmodified 2087.0131 0.013090467 3591 X6RJS7;P46736-2;P46736-3;P46736;A0A0A0MS96;P46736-5 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes no 0 0 1 3 0 1 46.97 47.049 3 2.7173E-25 12806 20230619_1882_Aki_TMTPro18x_K_F3 215.62 188.59 46649 34026 37058 35331 34363 47721 40751 41702 52816 49898 54058 50226 53723 53210 56250 52700 61540 63877 43033 31183 38402 35757 36202 47166 41099 43221 53158 50026 55373 51086 55017 54752 57426 53608 58846 60543 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82363000 4848 3591 4595 9086 7382 7382 1 9606 Homo sapiens 0.013064445285635884 DRVELLR Unmodified 899.51886 0.51886475 4146 Q765P7 MTSS1L MTSS1-like protein yes yes 0 0 1 5 0 1 37.079 37.172 3 0.011153 8358 20230619_1885_Aki_TMTPro18x_K_F5 94.302 9.2384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4849 4146 4596 9087 7383 7383 1 9606 Homo sapiens 0.06508606991621946 DRVGQNLPR Unmodified 1053.5679 0.56794021 1698 A0A7P0T8J7;A2A2Q9;A0A7P0TA70;Q9Y312 AAR2 Protein AAR2 homolog yes no 0 0 1 7 0.816 1 1 1 30.91 30.958 3 0.00059001 5694 20230619_1887_Aki_TMTPro18x_K_F7 114.84 89.455 51466 58595 49937 47840 68963 61145 49266 62352 70469 59816 61215 56274 60412 51429 57287 60234 71301 59259 47694 53520 51097 49447 69527 60944 51509 63486 70227 60497 63167 57148 61555 53681 59092 60330 68001 56339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33276000 4850 1698 4597 9088;9089;9090 7384 7384 1 9606 Homo sapiens 0.04329895280557139 DRVHHEPQLSDK Unmodified 1459.7168 0.71678929 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-2;O43852-4;A0A024R755;B3KNG6;O43852-10;O43852-6;O43852-5;O43852-13;O43852-9;O43852-11;O43852-14;O43852-8;O43852-7;O43852-12 CALU Calumenin yes no 0 0 1 3.5 0.957 1 2 2 1 29.977 30.054 4;5 0.00034741 5561 20230619_1883_Aki_TMTPro18x_K_F4 102.87 72.814 88370 63054 91391 89662 131960 120880 109310 132620 145250 104120 123540 138990 124710 104500 122970 123150 146030 131310 81671 57971 93155 88779 133110 120150 112670 133810 144960 107840 127940 138340 127190 109900 126330 123920 139390 124680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 546980000 4851 2386 4598 9091;9092;9093;9094;9095;9096 7385;7386 7386 2 9606 Homo sapiens 0.005319563927969284 DRVQVER Unmodified 900.47773 0.47772821 2433 B3KWQ6;P41219;P41219-2;F8W835 PRPH Peripherin yes no 0 0 1 3 0 1 23.096 23.248 3 0.024679 3811 20230619_1882_Aki_TMTPro18x_K_F3 79.713 13.283 819390 461670 1006100 964150 1027800 1312000 892580 1082700 755340 824490 1163800 1461600 1093800 1034800 1033100 670980 1483400 1229500 757620 427240 1006600 935990 1062700 1293500 905140 1114800 793620 865850 1173900 1438600 1116600 1062100 1074200 712800 1413200 1162800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 393660000 4852 2433 4599 9097 7387 7387 1 9606 Homo sapiens 0.023508459521394798 DRVTDALNATR Unmodified 1230.6317 0.63166267 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 1 6.29 1.03 2 2 2 1 38.044 38.108 2;3 1.2534E-11 8736 20230619_1886_Aki_TMTPro18x_K_F6 175.49 134.46 365410 285720 316020 354470 403490 427890 388140 402450 525530 422780 436680 419510 442230 382730 365580 493130 465500 478100 337410 262200 326660 353250 412000 426570 396390 413330 523830 426350 452210 425010 447720 401820 379330 492540 444510 454220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7067899999.999999 4853 272 4600 9098;9099;9100;9101;9102;9103;9104 7388;7389;7390 7389 3 9606 Homo sapiens 0.02557210926966036 DRVTNQPIGGR Unmodified 1211.6371 0.6370824 2676 Q6DKI9;Q9BSR4;Q4QRK8;B7Z1W6;Q9H9Y6-4;Q9H9Y6-5;Q9H9Y6-2;Q9H9Y6;Q9H9Y6-3;Q9H6S8 POLR1B DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA2 yes no 0 0 1 6.5 0.5 1 1 29.563 29.632 3 0.00030044 5215 20230619_1887_Aki_TMTPro18x_K_F7 109.39 90.774 36135 25549 36191 41135 50922 47176 44965 45774 51430 45699 48869 48236 50695 36624 39387 38685 53437 45170 33385 23527 37000 40314 51500 47216 45879 46853 51928 46268 50321 48440 51111 38311 41016 39212 50935 42864 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14470000 4854 2676 4601 9105;9106 7391 7391 1 9606 Homo sapiens 0.03972934509465631 DRYDSFIELQEK Unmodified 1541.7362 0.73618733 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 1 3.5 1.12 1 1 1 1 52.378 52.427 3 0.00023602 15102 20230619_1883_Aki_TMTPro18x_K_F4 110.9 81.993 2406100 1892900 2149100 2423000 2454900 2667400 2645200 2686900 3967100 3246200 2888600 2692700 3088500 2495600 2486400 3132600 2993100 3207200 2222400 1737600 2210900 2406400 2533600 2679300 2695600 2757700 3922600 3235900 3020700 2752200 3117200 2616000 2570500 3139900 2860300 3044600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 913730000 4855 4414 4602 9107;9108;9109;9110 7392 7392 1 9606 Homo sapiens -0.013011321069598125 DRYYGINDPVADK Unmodified 1524.7209 0.72087161 4611 Q9NW64-2;Q9NW64 RBM22 Pre-mRNA-splicing factor RBM22 yes no 0 0 1 4.5 0.5 1 1 46.144 46.204 3 2.0471E-05 12142 20230619_1885_Aki_TMTPro18x_K_F5 119.45 98.493 84801 77814 80866 107440 91934 120720 105680 106350 131070 124500 123120 110590 124620 103560 98377 136330 140110 129510 78443 71449 82838 106160 95179 120660 106520 110120 131770 124470 126640 112730 125920 108810 103010 135970 133580 123120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210650000 4856 4611 4603 9111;9112 7393 7393 1 9606 Homo sapiens -0.020499989041809386 DSAIPVESDTDDEGAPR Unmodified 1772.7701 0.77006623 2409 B3KT11;C9JA08;Q96D46;B3KMN5;B4DKU1 NMD3 60S ribosomal export protein NMD3 yes no 0 0 0 1 0 1 43.478 43.478 2 7.3035E-71 11622 20230619_1880_Aki_TMTPro18x_K_F1 321.79 296.4 26279 23281 23288 25147 24998 27016 31456 29610 35620 28837 33487 34241 36289 33400 30465 38569 38780 36051 24289 21327 23947 25281 26007 27246 31458 30056 35938 29365 34582 34506 36698 34733 31584 38514 37005 34278 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61540000 4857 2409 4604 9113 7394 7394 1 9606 Homo sapiens -0.08540800196533382 DSAIQQQVANLQMK Oxidation (M) 1588.7879 0.78790532 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 0 7.5 0.5 1 1 52.587 52.661 3 0.0022415 14692 20230619_1888_Aki_TMTPro18x_K_F8 71.529 52.454 115070 89853 99658 121660 115140 114640 121300 127020 133820 133860 142260 137240 142680 117130 147350 139080 133010 141530 106250 82534 102870 120130 118480 116760 122350 129100 135970 134980 145580 138510 145770 122670 148920 139590 127460 134370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 376900000 4858 3881 4605 9114;9115 7395 7395 2547 1 9606 Homo sapiens 0.01706288315290294 DSAIQQQVANLQMK Unmodified 1572.793 0.7929907 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 8 0 1 55.418 55.48 3 8.911E-06 15973 20230619_1888_Aki_TMTPro18x_K_F8 117.93 96.375 61837 55558 60528 66580 59370 68405 66781 71538 87797 73152 78760 68180 77127 68224 83707 90005 88164 85342 57204 50941 61618 66368 62017 69103 67566 72896 87839 73728 81108 69530 79112 71516 85284 89816 84292 81118 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96500000 4859 3881 4605 9116 7396 7396 1 9606 Homo sapiens 0.029505921779218625 DSAQCAAIAER Unmodified 1190.535 0.5349851 4394 Q96RS6;Q96RS6-3;Q96RS6-2;A0A7I2V457 NUDCD1 NudC domain-containing protein 1 yes no 0 0 0 2.5 0.5 1 1 34.917 34.976 2 6.273E-06 7649 20230619_1881_Aki_TMTPro18x_K_F2 157.28 142.61 165970 108500 149200 158140 152910 179530 168050 160790 212200 183120 208440 184040 221490 175910 153780 206250 260860 227570 153140 99819 153080 155840 159140 179410 169920 166180 213420 184010 214330 186650 222460 183440 163740 207800 248320 216050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221440000 4860 4394 4606 9117;9118 7397 7397 1 9606 Homo sapiens -0.05266099624486742 DSAQESVITR Unmodified 1104.5411 0.54111633 1740 A0A804HKD7;F1LJ00;Q5R372-4;Q5R372;Q5R372-3 TBC1D18;RABGAP1L Rab GTPase-activating protein 1-like yes no 0 0 0 2 0 1 35.61 35.667 2 0.00093555 7938 20230619_1881_Aki_TMTPro18x_K_F2 108.7 62.271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4861 1740 4607 9119 7398 7398 1 9606 Homo sapiens -0.0069725812129490805 DSAQNSVIIVDK Unmodified 1287.667 0.66704513 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TND0 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 4.5 0.5 1 1 49.173 49.23 3 3.1735E-05 13592 20230619_1883_Aki_TMTPro18x_K_F4 120.14 72.132 572840 413360 464670 480200 469310 555910 429980 402740 555270 475930 428220 377560 421850 370800 407020 513360 437560 360180 528470 379210 481100 480430 486910 552920 439760 424110 553560 474500 444720 387810 430230 390040 416410 504750 417830 344010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1061499999.9999999 4862 1817 4608 9120;9121 7399;7400 7399 2 9606 Homo sapiens 0.03471828664123677 DSAQRDDMIFEDCGDVPSEPK Oxidation (M) 2426.0002 0.0002188736 1923 Q6LEU2;A3KLL5;P05026-2;P05026;A0A8I5KNT2;B7Z9S8;A6NGH2 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 1 1 1 0 1 48.4 48.4 3 5.1481E-05 13712 20230619_1880_Aki_TMTPro18x_K_F1 89.011 77.868 15406 12016 13443 20655 18682 24251 19011 21988 25222 20389 21529 22203 24400 15555 18994 25344 18932 23653 14226 11069 13948 20169 19043 24172 19338 22569 25186 20751 22385 22244 24518 16802 19443 25194 18147 22466 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20891000 4863 1923 4609 9122 7401 7401 1235 1 9606 Homo sapiens -0.15574122708221694 DSAQRDDMIFEDCGDVPSEPK Unmodified 2410.0053 0.0053042515 1923 Q6LEU2;A3KLL5;P05026-2;P05026;A0A8I5KNT2;B7Z9S8;A6NGH2 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 1 2 0 1 51.223 51.268 3 2.0333E-11 14984 20230619_1881_Aki_TMTPro18x_K_F2 129.02 122.15 24083 22340 21631 26929 24698 37749 34133 32754 46821 35032 31329 34768 35242 27584 32468 42643 39778 48375 22269 20482 22279 26950 25772 37205 34226 33859 46330 35303 33067 35068 35715 29512 33528 42889 38048 45855 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19273000 4864 1923 4609 9123 7402 7402 1 9606 Homo sapiens -0.14329818845590125 DSAQTSVTQAQR Unmodified 1290.6164 0.61640654 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 3.5 0.5 1 1 30.336 30.416 2 4.9806E-13 5746 20230619_1882_Aki_TMTPro18x_K_F3 211.46 184.14 17066 9985.1 25311 27634 40254 41327 26235 33245 30931 17738 30647 35949 27579 28280 32328 10593 34713 29805 15816 9289.2 25257 26589 40215 40529 27434 34091 31187 19333 31371 35369 28502 28482 32795 12084 33156 28123 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37388000 4865 349;3906 4610 9124;9125 7403;7404 7403 2 9606 Homo sapiens -0.017277006608765078 DSAVAISGADSR Unmodified 1147.5469 0.54692999 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 2.5 0.5 1 1 37.582 37.639 2 1.2749E-17 8644 20230619_1882_Aki_TMTPro18x_K_F3 266.39 233.55 119100 82331 118590 118510 138860 143520 123510 120870 173530 137750 178430 180880 167460 149670 158420 129850 203940 186800 110020 75716 120790 116990 142240 142700 126990 125520 173990 139720 182350 180530 170910 154400 163590 134110 194570 176890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115290000 4866 594 4611 9126;9127 7405;7406 7406 2 9606 Homo sapiens -0.020941596096236026 DSAVNAICYGAK Unmodified 1267.5867 0.58668632 1807 O60832;A0A8Q3WLC8;A0A8Q3SIY6;A0A8Q3SIS9;A0A8Q3SJE8;A0A8Q3WLD1;A0A8Q3WLG7;A0A8Q3SIX2;C9IYT0;O60832-2;A0A8V8TKY9 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 0 0 0 7 0 1 48.252 48.338 2 0.0056862 12820 20230619_1887_Aki_TMTPro18x_K_F7 96.89 80.316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4867 1807 4612 9128 7407 7407 1 9606 Homo sapiens -0.03640355930588157 DSCIGVDDR Unmodified 1035.4291 0.42912304 2591 B4DUC9;Q8WW59 SPRYD4 SPRY domain-containing protein 4 yes no 0 0 0 1 0 1 36.346 36.346 2 0.002713 8501 20230619_1880_Aki_TMTPro18x_K_F1 98.582 51.588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4868 2591 4613 9129 7408 7408 1 9606 Homo sapiens -0.08717435469930024 DSCPLDCK Unmodified 993.38957 0.38956641 2236 B2R6F3;P84103-2;P84103;A0A087X2D0 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 yes no 0 0 0 3.5 0.5 1 1 41.292 41.343 2 0.001695 10185 20230619_1882_Aki_TMTPro18x_K_F3 138.54 99.753 631850 345710 779250 756600 1066100 1319800 858660 1083100 1114500 665960 1078600 1198700 1001100 993010 1019100 485670 1182100 1245600 584170 320240 783660 736780 1080300 1284900 886300 1110800 1117600 712430 1105800 1184800 1026100 1004500 1041900 540610 1129900 1174800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 688280000 4869 2236 4614 9130;9131 7409;7410 7409 2 9606 Homo sapiens -0.10739278745006686 DSDAGSSTPTTSTR Unmodified 1381.5957 0.59573068 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;A0A2R8YF80;B4E0F1;B4DSI8;B3KNW7;A0A2R8Y523;A0A2R8Y5K3;K7EQF0;A0A2R8YFK5;K7EP28 SMARCA4 Transcription activator BRG1 yes no 0 0 0 1 0 1 28.687 28.687 2 0.0054708 5492 20230619_1880_Aki_TMTPro18x_K_F1 72.652 51.782 2295.9 1545.8 1912.1 1818.2 1751.7 3226.3 2869.3 3450.7 2705 2221.6 4256 2705.8 2452 1960.8 3384.4 2041.6 2847.3 4085.9 2117.6 1418.7 1973.8 1833.3 1872.2 3156.1 2825.1 3472.8 2818.1 2324.7 4205.3 2706.4 2601.3 2055.5 3388.6 2168 2738.1 3854.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1560900 4870 1348 4615 9132 7411 7411 1 9606 Homo sapiens -0.07980335831189223 DSDDSAATPQDETVEER Unmodified 1863.7606 0.76062375 1384 A0A2X0SFJ0;O75962-4;O75962;E7EPJ7;O75962-5;O75962-2;A0A8V8TNC6;E7EWP2;D3DTD2;A0A1W2PRD7;A0A8V8TLX5 TRIO Triple functional domain protein yes no 0 0 0 1 0 1 36.206 36.206 3 2.1108E-18 8450 20230619_1880_Aki_TMTPro18x_K_F1 177.39 167.74 16129 10046 10845 14955 19727 21880 23406 21445 30629 18679 19775 23027 20031 15320 18375 20682 22301 21046 14851 9247.1 11623 14778 19910 21579 23574 21862 30320 19177 20832 22910 20356 16345 18943 20711 21291 19990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52824000 4871 1384 4616 9133 7412 7412 1 9606 Homo sapiens -0.13670613272711307 DSDDVPMVLVGNK Oxidation (M) 1403.6602 0.66024519 1729;3377 A0A804HJ06;X5D945;P01112-2;P01112;A0A8C8MQR2;Q5U091;P01111 HRAS;NRAS GTPase HRas;GTPase HRas, N-terminally processed;GTPase NRas no no 0 1 0 3.5 0.5 1 1 52.807 52.848 3 0.021367 15288 20230619_1883_Aki_TMTPro18x_K_F4 52.555 31.602 54246 38510 50658 52535 52406 67329 58032 57147 74458 58728 59572 54264 55701 57258 57680 64609 67223 69318 50091 35390 51810 52079 54557 66687 58683 59119 74281 59189 61623 55427 57154 59326 59184 65052 64241 65781 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54328000 4872 1729;3377 4617 9134;9135 7413 7413 1133 1 9606 Homo sapiens -0.02543852278745362 DSDDVPMVLVGNK Unmodified 1387.6653 0.66533057 1729;3377 A0A804HJ06;X5D945;P01112-2;P01112;A0A8C8MQR2;Q5U091;P01111 HRAS;NRAS GTPase HRas;GTPase HRas, N-terminally processed;GTPase NRas no no 0 0 0 4 0.816 1 1 1 57.502 57.534 3 0.00080098 17306 20230619_1883_Aki_TMTPro18x_K_F4 88.021 76.915 128090 104710 118040 117530 96551 144610 120840 114270 149660 143700 147140 136390 153470 124610 142990 165510 169130 167400 118360 95979 120460 118020 103010 143410 121340 119630 150720 143490 151290 138470 155930 131140 147150 165690 161550 158980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133470000 4873 1729;3377 4617 9136;9137;9138 7414 7414 1 9606 Homo sapiens -0.012995484161365312 DSDEADLVLAK Unmodified 1174.5717 0.57174776 1933 A4D177;Q13185 CBX3 Chromobox protein homolog 3 yes no 0 0 0 1 0 1 53.379 53.379 2 0.014811 15738 20230619_1880_Aki_TMTPro18x_K_F1 77.677 45.457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4874 1933 4618 9139 7415 7415 1 9606 Homo sapiens -0.008555245269008083 DSDKTDTDWR Unmodified 1237.5211 0.52110917 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;F8VP89;F8VSC7;F8W0K0 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 1 2.5 0.5 1 1 38.087 38.146 3 0.029102 8822 20230619_1882_Aki_TMTPro18x_K_F3 61.235 40.772 148810 103290 134670 146620 175430 190710 175430 172020 242840 185880 201170 173100 197150 133890 169090 133340 210100 130330 137360 94971 138670 145020 179120 189030 178880 177350 241730 186860 207930 174940 199820 139550 174460 133990 200080 124110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 316930000 4875 2578 4619 9140;9141 7416 7416 1 9606 Homo sapiens -0.08815053851935772 DSDLATQNRPLWQCFLGR Unmodified 2176.0484 0.048370536 3001 G1UI16;Q29RF7;Q29RF7-3;H0Y9X6 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 1 2 0 1 60.352 60.363 3 2.5183E-38 18760 20230619_1881_Aki_TMTPro18x_K_F2 246.95 218.87 49156 30212 40148 42851 38135 45470 40961 43885 53194 44055 36215 42706 52749 41937 34539 49129 53810 52610 45314 27795 41517 42261 39919 45723 41521 44942 52834 44498 38704 43374 52455 43690 36582 49404 51290 49936 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45109000 4876 3001 4620 9142 7417 7417 1 9606 Homo sapiens 0.00738828575322259 DSDPEFR Unmodified 864.36136 0.36136105 2917 E9PHT6;Q9NVE7;Q7RTX2;B4DHW9;H0YA26 PANK4 Pantothenate kinase 4 yes no 0 0 0 1 0 1 35.361 35.361 2 0.060162 8144 20230619_1880_Aki_TMTPro18x_K_F1 81.635 74.484 32890 19812 29154 33087 43947 48219 35953 40280 50583 28426 39396 39057 39639 31036 35871 25907 45393 38563 30334 18266 30171 32490 44299 47401 37161 41365 50179 29732 40948 38893 40263 32033 37006 26861 43293 36518 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26240000 4877 2917 4621 9143 7418 7418 1 9606 Homo sapiens -0.07624517338422265 DSDQLDVIQENR Unmodified 1430.6638 0.66375066 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;Q5T4S7-5 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 1 0 1 45.511 45.511 3 6.4171E-07 12525 20230619_1880_Aki_TMTPro18x_K_F1 116.81 83.808 30443 24663 38971 37900 44808 42738 43572 48746 49456 43233 51512 52086 50934 44331 47246 36305 55849 58333 28214 22685 38954 37249 45972 42984 44207 49217 50110 44254 52733 52189 51836 45589 48519 37883 53370 55162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22653000 4878 4061 4622 9144 7419 7419 1 9606 Homo sapiens -0.034354661805537035 DSDSSVLTR Unmodified 978.4618 0.46180338 3294 O75157-2;O75157 TSC22D2 TSC22 domain family protein 2 yes no 0 0 0 2 0 1 35.71 35.767 2 1.0784E-05 7976 20230619_1881_Aki_TMTPro18x_K_F2 171.99 93.217 41733 26379 41154 46499 55143 60811 43978 47688 63825 52849 63667 70220 61514 51900 50281 44349 79298 68448 38530 24333 42090 45442 55912 60073 45614 49758 63860 53690 65255 69809 62342 53769 52884 46061 75516 64796 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39365000 4879 3294 4623 9145 7420 7420 1 9606 Homo sapiens -0.02828905075421062 DSEAELQR Unmodified 946.43559 0.43558863 1949 Q8TC62;E7EPK1;A4GYY8;Q3LIE9;Q16181;Q16181-2;E7ES33;B4DUD6;B4DNE4;A8K3D0;A0A024RA87;A0A023T695;G3V1Q4;B4DPQ6;Q5JXL7;A0A0U1RRM2 SEPT7;DKFZp686F17268;Nbla02942;DKFZp586I031 Septin-7 yes no 0 0 0 1 0 1 32.539 32.539 2 0.0016577 6969 20230619_1880_Aki_TMTPro18x_K_F1 139.14 90.351 44950 21427 51659 50915 68213 84540 52514 76326 92249 50789 86780 119070 89196 83475 66000 42533 123160 121800 41507 19894 52168 49377 69263 82640 55142 77792 91329 54830 89565 116400 89966 85152 70529 47917 117270 114850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115410000 4880 1949 4624 9146 7421 7421 1 9606 Homo sapiens -0.039771742468929006 DSEAELQRR Unmodified 1102.5367 0.53669966 1949 Q8TC62;E7EPK1;A4GYY8;Q3LIE9;Q16181;Q16181-2;E7ES33;B4DUD6;B4DNE4;A8K3D0;A0A024RA87;A0A023T695;G3V1Q4;B4DPQ6;Q5JXL7;A0A0U1RRM2 SEPT7;DKFZp686F17268;Nbla02942;DKFZp586I031 Septin-7 yes no 0 0 1 1.5 0.5 1 1 28.71 28.747 3 7.7241E-05 5524 20230619_1880_Aki_TMTPro18x_K_F1 129.38 101.64 29082 14971 34205 33223 46021 38037 35959 42210 45581 32871 49882 51081 45156 45709 38280 24912 64908 48061 26868 13876 34472 32093 46497 38189 37163 42571 46003 34290 50764 50816 45984 46218 40429 26720 61730 45465 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34202000 4881 1949 4625 9147;9148 7422 7422 1 9606 Homo sapiens -0.010467225441971095 DSEDVPMVLVGNK Unmodified 1401.681 0.68098063 3099;636 I1SRC5;Q14015;Q14014;L7RSL8;P01116;A0A221ZRZ5;A0A8I5KYH6;A0A8I5KUB5;A0A8I5KQ21;A0A3G1LBH1;A0A024RAV5;P01116-2 KRAS GTPase KRas;GTPase KRas, N-terminally processed no no 0 0 0 3.5 0.5 1 1 57.505 57.523 3 0.0015889 17305 20230619_1883_Aki_TMTPro18x_K_F4 77.597 65.237 286470 229860 259650 266920 261820 280230 280890 253150 374670 273090 300490 258140 310490 243240 301550 326980 271870 287920 264650 210780 266050 266750 272450 281830 284920 261150 373080 274770 311950 262530 315990 255890 305320 324990 260520 273820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106420000 4882 3099;636 4626 9149;9150 7423 7423 1 9606 Homo sapiens -0.0037926189909285313 DSEEAEIIR Unmodified 1060.5037 0.50366819 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 1 0 1 40.703 40.703 2 0.018021 10393 20230619_1880_Aki_TMTPro18x_K_F1 78.516 60.481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4883 261 4627 9151 7424 7424 1 9606 Homo sapiens -0.02416349386908223 DSEENPATEERPEK Unmodified 1629.7118 0.71182307 2852 Q9P2W9;D6RF48;D6RC71 STX18 Syntaxin-18 yes no 0 0 1 1 0 1 35.043 35.043 3 1.4345E-05 7989 20230619_1880_Aki_TMTPro18x_K_F1 117.2 104.84 72388 42658 60882 78221 84706 110430 81163 82907 127070 91728 105020 136540 134210 118820 82040 106450 175380 166540 66731 39386 63292 76378 86260 108480 83411 86840 125890 93710 110200 135850 133720 122540 89607 110460 166840 157580 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 31461000 4884 2852 4628 9152 7425;7426;7427 7426 3 9606 Homo sapiens -0.07784437051168425 DSEPLGIEEAQIGK Unmodified 1484.7359 0.73585297 2707 B7ZKR9;O95602;B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 yes no 0 0 0 2.5 0.5 1 1 54.287 54.322 3 0.0036325 16099 20230619_1882_Aki_TMTPro18x_K_F3 54.898 39.008 81975 65181 72289 81555 79393 89224 79252 86564 148250 73977 74857 74545 71593 74890 71735 73317 326410 79873 75712 59817 74398 81110 82083 89571 81995 88267 143940 75638 80091 75668 73693 77107 86867 74078 308140 76698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27546000 4885 2707 4629 9153;9154 7428 7428 1 9606 Homo sapiens 0.012874481731842025 DSETGENIR Unmodified 1019.452 0.45196697 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 1 0 1 30.52 30.52 2 3.369E-08 6171 20230619_1880_Aki_TMTPro18x_K_F1 205.36 180.44 52051 18882 56775 59882 101410 106470 70207 90828 88800 54336 90845 107440 69350 80460 81429 26326 104970 97801 47999 17678 57961 57611 100940 103670 73212 92815 89344 58529 92298 105600 72199 80997 83569 31523 100150 92160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205330000 4886 1488 4630 9155 7429 7429 1 9606 Homo sapiens -0.056980930808094854 DSETSFVPTNMAVNYVQHNR Unmodified 2308.0542 0.054243775 4107 Q9P0Q6;Q6GVN4;Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes no 0 0 0 7 0 1 53.039 53.11 3 4.2136E-30 14940 20230619_1887_Aki_TMTPro18x_K_F7 211.78 186.88 35732 28799 36290 42126 34405 44929 41975 40823 44281 47269 41937 38694 46303 39219 40750 53529 48283 48525 33041 26473 36837 41460 36137 45094 41957 42164 44919 47169 43309 39716 46864 41199 42022 53241 46126 46141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92649000 4887 4107 4631 9156 7430 7430 1 9606 Homo sapiens -0.04746117703643904 DSETVDEDEEVDPALTVGTIK Unmodified 2261.0434 0.043447122 1532 A0A3B3IUD7;Q14690;B4DH82 PDCD11 Protein RRP5 homolog yes no 0 0 0 1.5 0.5 1 1 59.271 59.277 3 1.6209999999999999E-22 18190 20230619_1880_Aki_TMTPro18x_K_F1 170.89 161.23 24164 21588 28294 29686 23940 29666 28141 27478 28087 34993 33978 36572 40941 29748 30256 39545 37468 40927 22388 19823 28345 29307 25332 29938 28147 28432 28891 34994 34898 36818 41023 31455 31404 39628 35803 38845 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64011000 4888 1532 4632 9157;9158 7431 7431 1 9606 Homo sapiens -0.03663286387654807 DSFLADQLDPIYVAYNM Unmodified 1973.9081 0.90808003 4644 Q9P265;Q96IB4 DIP2B Disco-interacting protein 2 homolog B yes no 0 0 0 5 0 1 68.143 68.186 2 0.016646 21443 20230619_1885_Aki_TMTPro18x_K_F5 68.069 61.536 0 0 0 1333.5 0 0 800.04 0 813.59 894.98 0 815.48 0 1832.6 1090.7 0 0 0 0 0 0 1213.9 0 0 756.64 0 797.06 856.28 0 859 0 1751.5 1023.6 0 0 0 0 0 0 1 0 0 1 0 1 1 0 1 0 1 1 0 0 0 2593300 4889 4644 4633 9159 7432 7432 1 9606 Homo sapiens -0.039917682015811806 DSFPNFLACK Unmodified 1197.5488 0.54884425 3464 P17568 NDUFB7 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 yes yes 0 0 0 1 0 1 61.064 61.064 3 0.00054635 18887 20230619_1880_Aki_TMTPro18x_K_F1 99.568 71.391 74373 62918 66755 77733 89651 105580 82681 92121 105490 51313 46182 36765 45100 38065 67403 46282 49595 39266 68727 57719 68865 77625 91232 104310 84442 93901 103670 53716 50115 38096 47137 39664 67043 46058 47553 37407 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54844000 4890 3464 4634 9160 7433 7433 1 9606 Homo sapiens -0.0420282212537586 DSFPWEVPK Unmodified 1103.5288 0.52876073 1192 A0A140VJP5;P31153;B4E1K2 MAT2A S-adenosylmethionine synthase isoform type-2 yes no 0 0 0 7 0 1 60.049 60.095 3 0.0024979 17867 20230619_1887_Aki_TMTPro18x_K_F7 72.607 53.827 39724 33027 42858 40165 34226 44947 37301 35551 52761 43366 38049 39388 42746 34318 37163 48299 46316 50278 36759 30295 43132 40043 36394 44860 37918 37187 52280 43322 39939 39996 43218 36327 38456 48382 44254 47719 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59138000 4891 1192 4635 9161 7434 7434 1 9606 Homo sapiens -0.018862497936879663 DSFPWEVPKK Unmodified 1231.6237 0.62372375 1192 A0A140VJP5;P31153;B4E1K2 MAT2A S-adenosylmethionine synthase isoform type-2 yes no 0 0 1 1 0 1 54.776 54.776 3 0.00049969 16300 20230619_1880_Aki_TMTPro18x_K_F1 105.86 80.478 93092 74043 93513 87916 100020 100390 89028 95141 105430 116190 110570 88761 107860 82435 105410 110860 90725 80494 86068 67915 94994 87843 103030 100500 90973 98075 106780 115450 112940 91207 109960 86767 106450 109250 86876 76813 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93129000 4892 1192 4636 9162 7435 7435 1 9606 Homo sapiens 0.017176836774979165 DSGACFSASEPDAVHVVLDR Unmodified 2130.964 0.96403178 2674 H0YER3;B7Z1J9;B7ZKW3;B7ZKW4;Q8NB37-3;Q8NB37 PDDC1 Parkinson disease 7 domain-containing protein 1 yes no 0 0 0 3 0 1 52.658 52.717 3 1.2793E-29 15374 20230619_1882_Aki_TMTPro18x_K_F3 197.84 155.78 36753 38646 43423 42537 41316 42608 47077 45510 33077 34720 43695 27757 28650 26945 59885 26540 26722 28989 34096 35388 43518 42666 43149 43167 46728 46011 34895 35436 43635 28523 31174 27801 58334 26926 25904 27500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44352000 4893 2674 4637 9163 7436 7436 1 9606 Homo sapiens -0.0562116703213178 DSGAIASFLAEGK Unmodified 1264.6299 0.62993134 4400 Q96T92 INSM2 Insulinoma-associated protein 2 yes yes 0 0 0 7 0 1 61.234 61.273 3 0.0066698 18364 20230619_1887_Aki_TMTPro18x_K_F7 69.03 58.396 138960 131310 142410 141380 98552 137800 136910 113430 136930 165050 144820 158960 188620 138610 169030 173170 178110 187210 128640 120260 143740 141960 107060 139060 135850 119060 140000 163840 150260 160870 190030 145630 172740 174240 170390 177630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27034000 4894 4400 4638 9164 7437 7437 1 9606 Homo sapiens 0.008201571183690248 DSGCCVQNDHSGCIQTQR Unmodified 2120.8422 0.84221886 4128 Q6ZWP8;Q6PJF5-2;Q6PJF5 FLJ00080;RHBDF2 Inactive rhomboid protein 2 yes no 0 0 0 3 0 1 30.653 30.739 3 2.6464000000000002E-24 5890 20230619_1882_Aki_TMTPro18x_K_F3 212.9 209.51 5858.9 2311.2 2930.5 3053.1 4439 5654.5 5416.6 3657.5 5169.7 6515.7 5370.2 5079 7391.9 4381.5 4525.4 7738.3 7757.8 4717.2 5377.7 2130.6 3246 3054.3 4529.7 5472.2 5389.8 3951.9 5298.9 6388.6 5584.2 5200.3 7334.4 4725.3 4846.9 7543.5 7370.3 4523.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8994800 4895 4128 4639 9165 7438 7438 1 9606 Homo sapiens -0.1733685565777705 DSGDVAALR Unmodified 902.44576 0.44575938 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2YQI1;A0A7I2V4R2;B7ZA24;P40763-3;P40763-2;A0A7I2YQD2;A0A7I2V4R3;A0A7I2V395;A0A7I2V2G1;A0A7I2V552;A0A7I2V4F6;A0A7I2V2T1;B5BTZ6 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 0 0 2 0 1 38.032 38.095 2 0.0078313 8979 20230619_1881_Aki_TMTPro18x_K_F2 102.51 43.596 64601 44754 65867 90634 95559 112810 87892 95484 131320 95679 97732 99833 101370 92245 82804 85289 112730 107390 59688 41353 67417 87908 96837 111880 90364 98723 129900 96915 101990 100860 102540 95049 86185 87062 107530 101780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135700000 4896 1660 4640 9166 7439 7439 1 9606 Homo sapiens -0.009365665216705565 DSGFTIVSPLDI Unmodified 1262.6394 0.63943339 200 B9A6K1;A0A024R2J9;A0A024R2H0;Q92609;Q92609-2 TBC1D5 TBC1 domain family member 5 yes no 0 0 0 4.5 0.5 1 1 66.385 66.413 2 6.3772E-05 20974 20230619_1883_Aki_TMTPro18x_K_F4 126.41 112.9 13417 11567 11641 15010 14714 17640 10991 10906 13486 12869 15879 18682 15884 13615 15757 17304 15261 21106 12397 10616 12037 14896 14962 17481 11382 11669 13695 13083 16200 18525 16203 14407 16009 17536 14647 19985 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22179000 4897 200 4641 9167;9168 7440;7441 7440 2 9606 Homo sapiens 0.018619254039322186 DSGITYLGIK Unmodified 1065.5706 0.57062555 2665 K7ES89;B5BUI8;P51452-2;P51452 DUSP3 Dual specificity protein phosphatase 3 yes no 0 0 0 8 0 1 55.916 55.978 2 0.0093419 16114 20230619_1888_Aki_TMTPro18x_K_F8 96.668 65.594 42913 35786 46275 44829 40297 43580 45889 45371 53617 50674 49732 42293 55426 39445 45875 60220 56573 54653 39711 32835 46626 44527 42470 44211 46200 46372 54036 50679 51399 43274 55894 41920 47486 59820 54012 51976 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47638000 4898 2665 4642 9169 7442 7442 1 9606 Homo sapiens 0.04046305894826219 DSGLKPFEQVK Unmodified 1246.6558 0.65575216 2140 B7Z3Z9;E7EPM6;P33121;P33121-2;A8K9T3;B4E0R0;P33121-3;H0Y9Z9;H0Y9U7 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes no 0 0 1 7.5 0.5 1 1 48.855 48.931 3 0.00045673 13076 20230619_1888_Aki_TMTPro18x_K_F8 99.5 83.276 479180 407360 431530 469440 382410 431920 399840 396660 482300 574960 640670 598710 567360 493070 692360 575710 629190 558580 442830 373440 441740 468560 401900 438970 405030 412610 493230 572080 646630 603110 587220 516370 697680 576710 602120 530980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 165770000 4899 2140 4643 9170;9171 7443;7444;7445 7444 3 9606 Homo sapiens 0.04229051360653102 DSGNIPEAIASYR Unmodified 1391.6681 0.66810776 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2;O15294-4 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 0 5 0 1 50.905 50.981 2 1.3381E-05 14176 20230619_1885_Aki_TMTPro18x_K_F5 158.25 142.37 69660 51159 51092 62349 48817 61196 61461 57827 66503 76441 77947 75616 80297 67981 76532 96241 85468 82977 64230 46951 53489 62022 51332 61883 61396 59829 67961 76218 79530 76587 81702 71852 78492 95457 81672 78961 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109940000 4900 1842 4644 9172 7446 7446 1 9606 Homo sapiens -0.012059569669645498 DSGPPPSTVSEAEFEDIMK Oxidation (M) 2050.9041 0.90411687 2481 Q8N684-3;Q8N684;Q8N684-2;B4DGF8;F5H669 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 0 1 0 3 0 1 54.951 54.997 3 0.019223 16343 20230619_1882_Aki_TMTPro18x_K_F3 55.094 45.931 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4901 2481 4645 9173 7447 7447 1521 1 9606 Homo sapiens -0.07929902485966522 DSGRDYVAQFEASALGK Unmodified 1812.8642 0.86424139 2781 CON__P15497 yes yes 0 0 1 7 0 1 58.88 58.929 4 9.7759E-09 17345 20230619_1887_Aki_TMTPro18x_K_F7 124.43 96.785 + 25940 45899 53468 30991 66204 70502 56675 60979 69759 68467 97041 93885 58677 59534 100070 60771 71576 107320 24371 41834 52084 33140 67423 68132 58144 63089 71343 69546 96639 92963 63085 62623 99254 63767 69006 101300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73832000 4902 2781 4646 9174 7448 7448 1 -0.009676165837390727 DSGRGDSVSDSGSDALR Unmodified 1679.7347 0.73468378 2235 B4DKX4;B2R6E2;Q53EL6-2;Q53EL6;Q5VZS7 PDCD4 Programmed cell death protein 4 yes no 0 0 1 1 0 1 32.089 32.089 2 0.0015039 6819 20230619_1880_Aki_TMTPro18x_K_F1 85.554 41.784 1834.9 1398.1 1474.8 2144.8 2796.9 2840.5 3423.9 3371 4456 2366 2596 3855.5 3764 3702.6 3361.2 3783.8 4230.5 4182 1693.2 1286.2 1553.2 2112.4 2817.3 2830.5 3442.7 3379.9 4400.6 2494.4 2811.3 3839.7 3791 3825.7 3475 3822.5 4038.9 3968.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5838100 4903 2235 4647 9175 7449 7449 1 9606 Homo sapiens -0.07799417933665609 DSGSFVAFQNIPGSELMSSFAK Unmodified 2318.0889 0.088897947 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 2 0 1 64.858 64.865 3 1.7478E-12 20744 20230619_1881_Aki_TMTPro18x_K_F2 137.39 125.43 51725 37969 47424 50751 39588 51175 54247 53561 48699 57557 51169 49882 57093 48862 48597 58989 50121 51465 47765 34880 48448 50207 42177 51743 53691 54661 50077 57698 52638 50960 57675 50968 49709 58670 47950 48957 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180970000 4904 3578 4648 9176 7450 7450 1 9606 Homo sapiens -0.017422946154965757 DSGSISLQETR Unmodified 1191.5731 0.57314474 4500 Q9H2G2;Q9H2G2-2;B4DZC9 SLK STE20-like serine/threonine-protein kinase yes no 0 0 0 2.5 0.5 1 1 39.359 39.42 2 0.0065952 9380 20230619_1882_Aki_TMTPro18x_K_F3 82.445 64.459 38015 25652 33665 33557 43484 40246 40737 37116 49014 43804 36691 44520 50345 37053 35088 57589 49794 46297 35080 23568 34697 33327 44276 40137 41470 38318 49005 43948 38862 44908 50209 39560 36883 56839 47476 44105 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83478000 4905 4500 4649 9177;9178 7451 7451 1 9606 Homo sapiens -0.014978904381450775 DSGSQEVLSELR Unmodified 1318.6365 0.63647328 2653 B4E343;Q9BVJ6;Q9BVJ6-3;Q9BVJ6-2;X6RJY0 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 0 0 0 1.5 0.5 1 1 48.698 48.73 2 1.3096E-12 13840 20230619_1881_Aki_TMTPro18x_K_F2 199.8 146.28 78886 61138 67686 87602 88697 96884 87738 86688 102340 93639 99818 94208 106550 87432 87769 109640 106370 107700 72834 56196 70128 86351 90478 97008 88953 89462 103330 94313 102770 95439 107640 91603 90729 109650 101610 102310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37126000 4906 2653 4650 9179;9180 7452 7452 1 9606 Homo sapiens -0.010099497208784669 DSGTDDQEEEPLER Unmodified 1618.6595 0.65945315 329 B4DMW4;A0A024R5B3;E9PN81;Q8TDP1 AYP1;RNASEH2C Ribonuclease H2 subunit C yes no 0 0 0 1 0 1 37.731 37.731 2 5.0851E-19 9083 20230619_1880_Aki_TMTPro18x_K_F1 186.02 173.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4907 329 4651 9181 7453 7453 1 9606 Homo sapiens -0.12513020184724155 DSGTDDQEEEPLERDFDR Unmodified 2151.8829 0.88286415 329 B4DMW4;A0A024R5B3;E9PN81;Q8TDP1 AYP1;RNASEH2C Ribonuclease H2 subunit C yes no 0 0 1 1 0 1 45.094 45.094 3 4.0249E-14 12327 20230619_1880_Aki_TMTPro18x_K_F1 164.8 155.27 21759 13373 20480 21961 25928 25036 22262 21829 27560 27835 28755 26860 30550 24155 20670 28695 28297 30748 20079 12326 20995 21498 26385 25009 22826 22683 27840 27785 29496 27225 30644 25261 21658 28853 27017 29174 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113520000 4908 329 4652 9182 7454 7454 1 9606 Homo sapiens -0.1470019626112844 DSGVQACFNR Unmodified 1152.4982 0.49820566 3738 P63096;P63096-2;A0A3B3ITM0 GNAI1 Guanine nucleotide-binding protein G(i) subunit alpha-1 yes no 0 0 0 4.5 0.5 1 1 38.683 38.75 2 1.1358E-06 9015 20230619_1885_Aki_TMTPro18x_K_F5 177.7 120.98 133370 117120 122380 130000 110490 121080 137660 127200 153430 148410 155040 144340 173610 141130 123580 193290 190280 164860 123300 107320 125110 130170 116460 123310 137710 130140 155480 148760 159680 146750 174250 148430 130600 191600 181230 156980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170600000 4909 3738 4653 9183;9184 7455 7455 1 9606 Homo sapiens -0.07194351450357317 DSGVVGARPR Unmodified 1012.5414 0.5413911 19 A0A024QZ09;Q96G74-3;Q96G74-5;Q96G74;Q96G74-2 OTUD5 OTU domain-containing protein 5 yes no 0 0 1 6 0 1 28.51 28.542 3 0.0030472 5284 20230619_1886_Aki_TMTPro18x_K_F6 83.456 71.23 24332 25568 30669 27024 29760 31142 25767 26271 37701 26870 30928 30156 24397 25542 27282 17955 33357 25857 22588 23405 30584 27244 30869 31085 26595 27195 37423 27252 31760 30283 25286 26087 27971 18645 31805 24503 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4333000 4910 19 4654 9185 7456 7456 1 9606 Homo sapiens 0.03562206389244693 DSHGVAQVR Unmodified 967.48354 0.48354187 3712 P62277;J3KMX5;E9PS50 RPS13 40S ribosomal protein S13 yes no 0 0 0 4 1.87 1 1 1 1 24.465 24.507 3 2.9345E-05 3882 20230619_1885_Aki_TMTPro18x_K_F5 146.23 103.15 586880 258250 668620 766010 1028600 861830 782850 974780 880900 506020 850150 862680 569300 617410 754420 326960 702280 651880 541730 241050 678030 732110 1031000 866310 807090 975110 888940 547490 861780 850940 599500 629170 758590 353010 672090 615900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 336840000 4911 3712 4655 9186;9187;9188;9189 7457;7458;7459;7460 7459 4 9606 Homo sapiens -0.0015005553619857892 DSIIYLTADSPNVMTTFR Unmodified 2042.9983 0.99829203 4150 Q7L0Y3;C9JVB6 TRMT10C Mitochondrial ribonuclease P protein 1 yes no 0 0 0 8 0 1 63.303 63.325 3 2.3194E-06 19250 20230619_1888_Aki_TMTPro18x_K_F8 97.095 86.151 59286 43347 48957 60402 52308 51371 56078 56598 61304 77244 76343 83781 98663 75403 76353 83580 62675 71305 54705 39840 50700 59460 54145 52765 56506 58029 62858 77122 78633 84432 98826 78501 77322 83172 60159 67824 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 245630000 4912 4150 4656 9190 7461 7461 1 9606 Homo sapiens 0.018512811267783036 DSIKLDDDSERK Unmodified 1419.6842 0.68415175 2126 A8K8U1;Q86VP6;Q86VP6-2;F5H6I6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 2 3 0.816 1 1 1 39.541 39.596 4 0.0023961 9388 20230619_1883_Aki_TMTPro18x_K_F4 70.889 49.638 238930 177420 189330 212030 235570 243330 220650 257230 284780 311680 333080 261190 258400 190660 188390 217850 247390 153190 220420 162790 197250 211730 240740 244070 225450 263070 288490 310410 335520 265070 262550 200500 196190 214860 235470 146530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 542070000 4913 2126 4657 9191;9192;9193 7462;7463 7463 2 9606 Homo sapiens -0.008902955207076957 DSILSEMK Unmodified 921.44773 0.44773322 4191 Q9UQE7;Q86VX4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 4 0 1 54.12 54.136 3 0.0013447 15863 20230619_1883_Aki_TMTPro18x_K_F4 95.815 65.648 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4914 4191 4658 9194 7464 7464 1 9606 Homo sapiens -0.01613273828070305 DSIPSEVDYETR Unmodified 1409.6311 0.63105355 1150 A0A0U1RQI9;Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes no 0 0 0 1 0 1 45.964 45.964 3 1.441E-05 12713 20230619_1880_Aki_TMTPro18x_K_F1 116.03 110.53 18603 13996 19234 15519 17623 21553 19343 18131 21111 21944 21623 23964 24540 21846 21903 24187 27679 23962 17198 12832 19441 15638 18494 21257 19464 18859 21439 22038 22306 24155 24841 22723 22648 24252 26402 22775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16771000 4915 1150 4659 9195 7465 7465 1 9606 Homo sapiens -0.057376733034061544 DSISAVSSEK Unmodified 1021.4928 0.49276916 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 3.5 0.5 1 1 42.719 42.763 2 3.5809E-11 10815 20230619_1882_Aki_TMTPro18x_K_F3 202.44 145.39 74070 39772 75617 100790 105830 115060 89251 95945 110610 83530 135100 160720 113420 115460 135790 65326 152730 165380 68356 36948 77286 96774 107100 114710 91642 99058 112280 87466 136720 157930 117630 117950 138220 72285 146060 155970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42932000 4916 630 4660 9196;9197 7466;7467 7466 2 9606 Homo sapiens -0.017117517611723088 DSIVAELDREMSR Unmodified 1519.7301 0.73005609 3188 Q53HJ6;M0QXB4;O14579;Q7Z4Z1;O14579-3 COPE Coatomer subunit epsilon yes no 0 0 1 3 0 1 56.734 56.77 3 2.1326E-06 17135 20230619_1882_Aki_TMTPro18x_K_F3 139.77 121.19 133490 120890 124510 129190 129780 134600 136770 143930 161780 149980 136650 130460 166170 124480 142340 197330 156650 140810 123450 110720 127330 129940 134560 135990 138290 146520 162460 150670 142630 133280 167450 132460 146250 193800 149630 134390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121560000 4917 3188 4661 9198 7468 7468 1 9606 Homo sapiens -0.009019736101208764 DSIVQGFQWGTR Unmodified 1392.6786 0.67861287 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2;K7EP67;K7EJ74 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 1.5 0.5 1 1 57.536 57.536 2;3 8.4846E-06 17495 20230619_1880_Aki_TMTPro18x_K_F1 143.73 121.6 123630 106390 124590 125420 121380 141630 132980 129640 174660 147070 150610 134810 157950 123200 141340 151620 136320 148590 114360 97548 126450 125340 126760 141710 134690 133730 174540 147410 155850 137080 160100 129040 143810 151720 130560 141120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89480000 4918 2436 4662 9199;9200 7469;7470 7469 2 9606 Homo sapiens -0.0020192952188153868 DSKPPGNLK Unmodified 954.51345 0.51344502 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 7.5 0.5 1 1 38.499 38.523 3 0.0037504 8874 20230619_1888_Aki_TMTPro18x_K_F8 85.533 51.455 50851 25263 66532 65595 93318 104760 66878 92963 74776 58375 92589 104040 81800 76295 87871 41607 98130 89339 47025 23492 66671 63357 94083 102570 69312 94771 76365 62230 93780 102520 84152 77787 89542 45209 93730 84381 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45363000 4919 3758 4663 9201;9202 7471 7471 1 9606 Homo sapiens 0.034368834091424105 DSKPSSTPR Unmodified 973.48287 0.48287317 1089;2882 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;Q9BTI9;Q9NX34;A0A024RAP1;V9HVU7;E5RI98 NPM1;CLEC2D Nucleophosmin no no 0 0 1 5.5 0.5 1 1 29.007 29.06 3 0.052964 5428 20230619_1886_Aki_TMTPro18x_K_F6 44.564 30.002 32222 14456 57091 52761 112420 78408 68049 97165 44398 24695 69475 77804 29884 48382 85078 12859 57904 46329 29902 13564 56673 50426 110700 77776 70561 95933 47460 30385 68536 75546 34492 48890 83635 15623 55585 43691 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 339270000 4920 1089;2882 4664 9203;9204 7472 7472 1 9606 Homo sapiens -0.004928949759005263 DSLDPSFTHALR Unmodified 1357.6626 0.66262845 1883 A0A994J7I5;O75525-2;O75525 KHDRBS3 KH domain-containing, RNA-binding, signal transduction-associated protein 3 yes no 0 0 0 5 0 1 46.715 46.792 3 0.00010412 12409 20230619_1885_Aki_TMTPro18x_K_F5 110.58 90.748 56755 42923 52002 50555 53953 62201 52547 54485 60606 41577 45833 46474 44746 39549 53483 51238 57936 55614 52418 39375 53237 50592 55894 61832 53327 55848 60641 42897 47703 46754 46146 41641 54463 51551 55374 52785 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52977000 4921 1883 4665 9205 7473 7473 1 9606 Homo sapiens -0.0018963575876114191 DSLDPSFTHAMQLLTAEIEK Unmodified 2245.0936 0.093648974 3807 Q07666;B4DDX2;B2R7B5;Q07666-2;B4E043;Q07666-3 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 0 0 0 8 0 1 65.157 65.176 3 0.00037163 20009 20230619_1888_Aki_TMTPro18x_K_F8 80.585 64.994 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4922 3807 4666 9206 7474 7474 1 9606 Homo sapiens 0.020905895272790076 DSLDQFDCK Unmodified 1126.4601 0.46008882 2082 A8K5Y7;Q9HAV4;B3KPQ5;B3KNC6;H0Y3W3 XPO5 Exportin-5 yes no 0 0 0 2.5 0.5 1 1 49.627 49.696 3 0.0020456 13970 20230619_1882_Aki_TMTPro18x_K_F3 90.15 73.377 109060 98682 90997 94696 108880 114610 103780 106170 153050 116760 97697 94367 111790 102390 111270 128350 111840 116570 100770 90303 94218 96291 111640 114270 106410 109290 150890 116880 103450 97129 113700 106710 113280 127860 107030 110820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123770000 4923 2082 4667 9207;9208 7475 7475 1 9606 Homo sapiens -0.09808282155699999 DSLIDSLT Unmodified 862.42838 0.42837799 3667 P56537;P56537-2 EIF6 Eukaryotic translation initiation factor 6 yes no 0 0 0 2 0.816 1 1 1 62.504 62.517 2 0.00067954 19733 20230619_1881_Aki_TMTPro18x_K_F2 158.53 143.76 133080 111940 112100 129960 128190 156300 120380 127010 199370 145530 147860 138120 148610 133510 147080 157800 152210 183790 122920 102630 115970 130090 132010 155370 124240 132250 196430 146040 154080 140450 151660 139190 149940 159590 145800 174180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115310000 4924 3667 4668 9209;9210;9211 7476;7477 7476 2 9606 Homo sapiens -0.0083390684733331 DSLIFLVDASK Unmodified 1206.6496 0.64960415 150 A0A024R1N4;P12956;P12956-2;B2RDN9 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 7 0.816 2 2 2 63.269 63.303 2;3 3.6081E-12 19317 20230619_1887_Aki_TMTPro18x_K_F7 257.15 199.59 1467100 1044100 1225900 1286900 1230500 1456300 1430500 1325100 1792300 1520700 1541800 1520000 1647100 1530800 1808400 1659100 1540500 1882600 1353600 958500 1266000 1282000 1285100 1456600 1441500 1368400 1794800 1527500 1598700 1543700 1686000 1585400 1820600 1678200 1478900 1784500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3869199999.9999995 4925 150 4669 9212;9213;9214;9215;9216;9217 7478;7479;7480 7479 3 9606 Homo sapiens 0.0545453312911377 DSLINLK Unmodified 801.45962 0.45961853 4235 Q8N5K1;D6RCF4 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes no 0 0 0 7 0.816 1 1 1 52.821 52.895 2 0.0068644 14882 20230619_1887_Aki_TMTPro18x_K_F7 138.24 21.339 229300 199820 220910 231230 255760 256730 288540 271350 375130 249780 257090 245580 236210 197670 279670 299080 293880 278120 212050 183170 225700 231360 263710 258100 291510 275650 372120 253690 268430 248070 243890 210840 284510 297670 280930 264440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 343580000 4926 4235 4670 9218;9219;9220 7481 7481 1 9606 Homo sapiens 0.05094710977436989 DSLLGDK Unmodified 746.38103 0.38103386 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 3.5 0.5 1 1 47.215 47.276 2 0.017133 12715 20230619_1883_Aki_TMTPro18x_K_F4 109.01 34.597 302140 213060 253670 268080 318280 319980 298730 298660 477350 348850 374440 314600 356040 285880 305090 291870 377790 301190 278770 195640 262730 266890 325200 319220 307720 307850 471670 349190 387660 320010 361520 296310 315030 293840 360240 286250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 320840000 4927 1091 4671 9221;9222 7482 7482 1 9606 Homo sapiens -0.0023014132766547846 DSLLQDGEFSMDLR Oxidation (M) 1640.7352 0.73520105 3400 P07737;K7EJ44 PFN1 Profilin-1 yes no 0 1 0 1.75 0.829 2 1 1 57.199 57.216 2;3 1.0566E-08 17265 20230619_1882_Aki_TMTPro18x_K_F3 148.66 135.78 69086 56697 61322 71400 71402 68741 74397 77868 83131 71251 74482 68922 75998 60728 85247 79954 96790 84985 63823 52029 63141 70866 73391 69947 75112 78739 83827 72295 76889 69848 77953 63964 87122 80331 92415 80709 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1858699999.9999998 4928 3400 4672 9223;9224;9225;9226 7483;7484;7485 7485 2012 3 9606 Homo sapiens -0.059537145381909795 DSLLQDGEFSMDLR Unmodified 1624.7403 0.74028642 3400 P07737;K7EJ44 PFN1 Profilin-1 yes no 0 0 0 2.5 1.12 1 1 1 1 61.872 61.883 2 2.0023E-83 19191 20230619_1882_Aki_TMTPro18x_K_F3 366.4 310.14 195460 163510 177380 194220 135860 191970 182400 180620 188870 241560 215050 218520 251190 193330 217480 261440 238030 241500 180620 149940 181210 193610 146010 193970 181500 186960 193380 240060 221020 222020 253480 203960 223120 260380 227570 229580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 993000000 4929 3400 4672 9227;9228;9229;9230 7486;7487 7487 2 9606 Homo sapiens -0.04709410675559411 DSLPPSPLLFPGK Unmodified 1366.7497 0.74965254 4242 Q8NBF2 NHLRC2 NHL repeat-containing protein 2 yes yes 0 0 0 1.5 0.5 1 1 62.045 62.05 3 0.046657 19311 20230619_1880_Aki_TMTPro18x_K_F1 45.507 38.301 126450 103950 113720 125640 112770 128270 135960 127740 131050 144620 137670 129410 134200 124760 158560 136220 126040 135710 116830 95352 116650 125150 117850 129500 135600 131010 134130 144770 140820 131900 138260 129420 158900 136760 120980 128860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64371000 4930 4242 4673 9231;9232 7488 7488 1 9606 Homo sapiens 0.08094770462912493 DSLRDESQR Unmodified 1104.516 0.51596421 4196 Q86WV7;Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 yes no 0 0 1 1 0 1 27.441 27.441 3 0.00025206 4985 20230619_1880_Aki_TMTPro18x_K_F1 131.45 97.658 22091 19465 31701 21143 38775 37691 23322 30486 40115 16412 36187 36684 26342 27434 28819 11358 33086 29456 20510 17833 31429 21455 39274 36706 24965 31242 39652 18004 36878 35991 27350 27741 29396 12750 31590 27799 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35517000 4931 4196 4674 9233 7489 7489 1 9606 Homo sapiens -0.032113129238496185 DSLRPEAAR Unmodified 1013.5254 0.52540669 3637 Q9BW75;Q96CV8;P52888;K7EP46;B4DU96;K7EKB6 THOP1 Thimet oligopeptidase yes no 0 0 1 3 0.816 1 1 1 29.724 29.801 3 0.00022712 5508 20230619_1882_Aki_TMTPro18x_K_F3 121.8 94.055 111820 81943 118520 132980 175750 196460 145800 173910 205470 138400 167260 160090 143050 132540 156810 115200 161100 142150 103380 75452 120800 130820 177330 193210 150600 178140 204190 142570 172310 160580 147500 136690 159210 117720 153970 134800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 131280000 4932 3637 4675 9234;9235;9236 7490;7491;7492 7490 3 9606 Homo sapiens 0.019185001523283063 DSLSDDVVK Unmodified 976.47131 0.47130543 129 B2R923;A0A024R159;Q6YN16-2;Q6YN16;B4DWC7;B4E136 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes no 0 0 0 2 0 1 46.467 46.546 3 0.044785 12870 20230619_1881_Aki_TMTPro18x_K_F2 49.368 10.349 23749 18900 22779 28532 30451 34092 28202 31463 41530 29617 33759 32617 31454 26640 28201 32067 33180 30897 21949 17381 23372 28073 30994 33977 28973 32265 41204 30147 34884 32784 32028 27960 29029 32063 31682 29367 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19188000 4933 129 4676 9237 7493 7493 1 9606 Homo sapiens -0.017871367898919743 DSLSPGQERPYSTVR Unmodified 1690.8275 0.82746195 2064 A8K548;Q8IZL8;C9JFV4;B4DR36;E7EV54;B4DEX7;O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 0 0 1 5 0.816 1 1 1 37.267 37.335 3 4.5782E-25 8405 20230619_1885_Aki_TMTPro18x_K_F5 223.9 195.7 200810 146870 196190 199490 219440 221360 231670 236360 242980 242250 257870 250560 262180 206050 239270 244750 243720 229550 185520 134940 200030 197430 226230 222530 233270 240540 247540 244700 264020 252500 266210 216110 243980 244500 233050 218240 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 227440000 4934 2064 4677 9238;9239;9240 7494;7495;7496;7497 7494 4 9606 Homo sapiens 0.009681315903662835 DSLVLNNITR Unmodified 1143.6248 0.62478638 3663 Q6PJJ2;P56182;Q53FR7;Q96J73;B4DZM3 RRP1 Ribosomal RNA processing protein 1 homolog A yes no 0 0 0 7 0 1 49.969 50.051 2 0.00032783 13600 20230619_1887_Aki_TMTPro18x_K_F7 133.44 100.08 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4935 3663 4678 9241 7498 7498 1 9606 Homo sapiens 0.058718980464163906 DSLYAQGK Unmodified 880.42905 0.42904669 3022 H0Y5B4;H7BZ11;J3KQN4;P83881;H7BY91;H0Y3V9 RPL36A;RPL36A-HNRNPH2 60S ribosomal protein L36a yes no 0 0 0 5.67 0.471 1 2 41.853 41.943 2 1.2811E-05 10314 20230619_1886_Aki_TMTPro18x_K_F6 166.45 113.81 253010 133610 319860 306090 408380 483040 331710 398820 409950 221760 326180 341910 333980 292910 292440 156560 439110 341270 233950 123890 320630 296900 415330 472560 341510 408270 409210 237620 339010 339810 338880 296730 305350 170360 418040 322540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 773380000 4936 3022 4679 9242;9243;9244 7499;7500 7500 2 9606 Homo sapiens -0.015950674076179894 DSLYAQGR Unmodified 908.43519 0.4351947 2213 B2R4V2;Q969Q0 RPL36AL 60S ribosomal protein L36a-like yes no 0 0 0 4 0 1 35.852 35.899 2 0.0029193 7892 20230619_1883_Aki_TMTPro18x_K_F4 120.92 85.288 312440 203420 309350 362650 425150 451870 366470 428040 530620 353250 387510 356330 433480 359040 348410 296900 504620 424040 288510 187650 316540 353980 431050 449350 377960 436690 525130 361530 405980 361700 437070 367290 364040 306670 480750 401700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 343740000 4937 2213 4680 9245 7501 7501 1 9606 Homo sapiens -0.022685491760853438 DSLYVDGDCTMDIR Oxidation (M) 1674.6865 0.68653629 2552;2741 C9J0J7;G5E9Q6;B4DNH1;D3DNI2;P35080-2;D3DNI3;C9JQ45;C9J712;P35080;C9J2N0 PFN2 Profilin;Profilin-2 no no 0 1 0 1.5 0.5 1 1 47.877 47.913 3 4.3555E-09 13490 20230619_1880_Aki_TMTPro18x_K_F1 161.21 154.15 133220 116360 142210 152950 136000 133000 131410 130750 136590 136800 175270 161640 143960 133870 145360 165390 156960 173010 123310 106800 143640 151180 141460 136000 133040 133990 140350 138670 176550 162140 148050 140610 148550 166060 150180 164180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 378860000 4938 2552;2741 4681 9246;9247 7502;7503 7502 1549 2 9606 Homo sapiens -0.12381951169595595 DSLYVDGDCTMDIR Unmodified 1658.6916 0.69162167 2552;2741 C9J0J7;G5E9Q6;B4DNH1;D3DNI2;P35080-2;D3DNI3;C9JQ45;C9J712;P35080;C9J2N0 PFN2 Profilin;Profilin-2 no no 0 0 0 2 0.816 1 1 1 53.163 53.194 2 3.9563E-30 15815 20230619_1881_Aki_TMTPro18x_K_F2 267.02 231.79 122790 101290 134300 140170 92323 116420 105840 113820 113790 136570 139790 154360 153440 136880 129530 161620 160720 171880 113640 93044 134870 138030 99669 119420 106340 117130 116620 137300 142890 155270 155090 143060 134040 162490 153550 163110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 236010000 4939 2552;2741 4681 9248;9249;9250 7504;7505 7505 2 9606 Homo sapiens -0.11137647306964027 DSNKPVTIPENSEIK Unmodified 1669.8523 0.85227972 2068 D6W5H1;A8K583;Q14966-4;Q14966-3;Q14966;B4E187 ZNF638 Zinc finger protein 638 yes no 0 0 1 5 0 1 46.412 46.489 3 0.0019569 12256 20230619_1885_Aki_TMTPro18x_K_F5 80.488 64.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4940 2068 4682 9251 7506 7506 1 9606 Homo sapiens 0.044147666731305435 DSNNLCLHFNPR Unmodified 1485.6783 0.67829529 1431 A0A384MR27;P09382 LGALS1 Galectin-1 yes no 0 0 0 7 0.816 1 1 1 43.382 43.427 3 4.9039E-18 10649 20230619_1887_Aki_TMTPro18x_K_F7 229 201.59 417330 332440 393970 401710 580910 646350 590740 658030 725640 478750 453620 470020 540640 417060 397900 517990 457530 457160 385650 304970 405140 403290 589110 635120 598930 666030 720230 493560 481990 475940 542100 437410 411080 515200 437180 434860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5235000000 4941 1431 4683 9252;9253;9254 7507;7508;7509 7508 3 9606 Homo sapiens -0.04511672513376652 DSPCQLEALK Unmodified 1159.5543 0.55432356 1206 A0A140VJT8;P13489;A0A024RC87 RNH1 Ribonuclease inhibitor yes no 0 0 0 4 0 1 50.03 50.065 2 2.9046E-09 13983 20230619_1883_Aki_TMTPro18x_K_F4 226.39 184.28 152460 130370 134050 148620 161430 191180 183580 172910 219790 200400 188220 174390 210580 162090 192750 227630 215280 208100 140870 119500 138250 149160 166290 189660 184840 178600 220620 200350 195500 177910 213290 171160 197750 226490 205710 197890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161980000 4942 1206 4684 9255 7510 7510 1 9606 Homo sapiens -0.01907143333573913 DSPDLLLLLR Unmodified 1153.6707 0.67067394 1587 A0A5H1ZRP4;Q8WX92-2;Q8WX92 NELFB Negative elongation factor B yes no 0 0 0 7 0 1 63.757 63.787 2 0.00091885 19548 20230619_1887_Aki_TMTPro18x_K_F7 107.15 59.58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4943 1587 4685 9256 7511 7511 1 9606 Homo sapiens 0.09998543228653034 DSPLETK Unmodified 788.3916 0.39159855 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 3 0 1 41.595 41.658 2 0.0076297 10306 20230619_1882_Aki_TMTPro18x_K_F3 123.69 55.932 118540 67055 147210 154130 192970 234330 170310 192200 209360 159000 223350 287870 210780 193930 196030 112890 268810 294360 109620 62157 147920 149330 196360 229640 174310 198330 211400 166430 228370 282760 214970 198990 203130 125180 256670 277570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62669000 4944 3758 4686 9257 7512 7512 1 9606 Homo sapiens -0.011061586732353135 DSPLLLQQISAMR Oxidation (M) 1486.7814 0.78136338 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;E7EWF7 DCTN1;DKFZp686I0746 Dynactin subunit 1 yes no 0 1 0 1 0 1 56.371 56.371 3 0.0033469 16990 20230619_1880_Aki_TMTPro18x_K_F1 74.769 57.743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4945 1717 4687 9258 7513 7513 1118 1 9606 Homo sapiens 0.057443951545792515 DSPLQGSGQQNSQAGQR Unmodified 1756.8089 0.80885177 1017 E7EN19;Q53TX8;A0A0D9SEY1;B7Z388;O95819-3;O95819-6;G5E948;V9HWH3;O95819-2;B7Z3V5;O95819;O95819-5;H7C360;O95819-4;E7ENQ1;Q5MD60;E7EX83;H7C0P6 MAP4K4;HEL-S-31 Mitogen-activated protein kinase kinase kinase kinase 4 yes no 0 0 0 3.5 0.5 1 1 33.241 33.305 3 2.1857999999999998E-38 6842 20230619_1883_Aki_TMTPro18x_K_F4 254.72 219.9 9896.3 5602 8782.7 8927.7 9701.9 12555 8885.3 8305.5 9616.4 8639.5 13698 11999 11404 10591 9279.3 7386.4 13596 10366 9124.7 5163.4 9029.9 8782 10001 12314 9034.1 8791.2 9905.7 8822.2 13745 11982 11618 10800 9698.8 7650.5 12944 9825.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59840000 4946 1017 4688 9259;9260 7514 7514 1 9606 Homo sapiens -0.039280300514519695 DSPSVWAAVPGK Unmodified 1212.6139 0.61388734 3400 P07737;CON__P02584;I3L3D5 PFN1 Profilin-1 yes no 0 0 0 5.2 3.06 1 1 1 2 54.772 54.81 2;3 9.2016E-07 15613 20230619_1888_Aki_TMTPro18x_K_F8 160.36 122.77 1100800 955380 1045400 1053500 973540 1127100 1073000 1078100 1171300 1375300 1248400 1212400 1476800 1199900 1237500 1482400 1385400 1408200 1017900 875420 1065600 1057300 1020200 1133300 1079700 1112600 1192300 1368800 1286900 1238000 1488300 1253400 1272100 1480300 1324300 1338200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1713499999.9999998 4947 3400 4689 9261;9262;9263;9264;9265 7515;7516;7517 7516 3 9606 Homo sapiens 0.016084956720987975 DSPTLSNSGIR Unmodified 1145.5677 0.56766543 466 A0A024R7P3;A0A024R7N2;Q9HD20-2;Q9HD20;Q8NC73;Q6ZUA1;Q9HD20-3;Q8N3E5 ATP13A1;DKFZp761L1623 Manganese-transporting ATPase 13A1 yes no 0 0 0 5 0 2 38.938 39.029 2 2.6607E-12 9125 20230619_1885_Aki_TMTPro18x_K_F5 246.59 181.33 37028 26179 34215 34382 45469 50507 47089 47164 57563 49803 58976 57489 58065 49172 53489 54773 63979 64226 34188 24048 35168 34257 46404 49762 47696 48464 58072 50442 60389 57742 59079 51306 55056 55479 61115 60902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30243000 4948 466 4690 9266;9267 7518;7519 7518 2 9606 Homo sapiens 0.0007043077002890641 DSQAALPK Unmodified 828.43413 0.43413207 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;D6RFI1;D6RCR4 DBN1 Drebrin yes no 0 0 0 4.5 0.5 1 1 40.11 40.176 2 0.0018381 9591 20230619_1885_Aki_TMTPro18x_K_F5 136.27 99.109 262020 172710 316150 326320 393130 430070 321620 384540 381120 313120 445690 494020 381600 375250 415790 220410 482950 456600 242400 159450 317830 317990 400240 425670 330580 393940 387120 325810 451830 488770 393470 382810 424780 237910 461260 431280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 156380000 4949 1396 4691 9268;9269 7520;7521 7521 2 9606 Homo sapiens 0.013052364549821505 DSQDAGGFGPEDR Unmodified 1349.5484 0.54838655 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1 PLEC Plectin yes no 0 0 0 1 0 1 38.388 38.388 2 1.7047E-27 9370 20230619_1880_Aki_TMTPro18x_K_F1 250.51 231.24 43950 37938 38367 38992 60329 65346 69185 71170 99332 68976 71813 77558 72464 65118 68231 89003 81694 74082 40610 34742 39795 39669 61214 64217 70103 72188 98287 70143 75036 77950 73793 68793 70313 88163 77981 70549 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61491000 4950 3921 4692 9270 7522 7522 1 9606 Homo sapiens -0.11240570311497322 DSQGENMFLR Oxidation (M) 1211.5241 0.52408606 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2 NUP93 Nuclear pore complex protein Nup93 yes no 0 1 0 3 0 1 40.838 40.897 2 0.076052 10003 20230619_1882_Aki_TMTPro18x_K_F3 56.916 50.466 23094 19083 24362 27548 34584 28604 28565 27385 35458 28436 37341 33883 31358 27320 31985 29669 33512 32592 21365 17538 24803 27127 34883 28835 29361 28100 35777 28861 37937 33940 32226 28519 32585 29952 32043 30928 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32499000 4951 4222 4693 9271 7523 7523 2703 1 9606 Homo sapiens -0.0732150199876287 DSQGENMFLR Unmodified 1195.5292 0.52917144 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 3 0 1 46.629 46.707 2 0.00051666 12655 20230619_1882_Aki_TMTPro18x_K_F3 121.6 82.641 138070 107410 127910 148230 142490 162900 146310 147960 187890 168450 160290 166210 189200 154500 165280 179520 192660 195920 127550 98686 131130 146470 147090 163220 148570 152740 187990 169150 167050 168420 191040 161160 170070 180880 184100 185900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67179000 4952 4222 4693 9272 7524 7524 1 9606 Homo sapiens -0.06077198136131301 DSQICELK Unmodified 991.46445 0.46444592 2116 A8K878;P55145 MANF Mesencephalic astrocyte-derived neurotrophic factor yes no 0 0 0 3.5 0.5 1 1 45.374 45.434 2 1.7539E-07 12036 20230619_1882_Aki_TMTPro18x_K_F3 215.42 116.04 283750 207000 239440 288360 312150 339610 313370 300730 441350 345930 364150 361900 385950 317350 295490 372400 439170 404980 261860 190250 248320 285040 318820 338580 319660 311150 439060 347950 378030 365170 389030 331840 310390 374940 418570 384430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 191700000 4953 2116 4694 9273;9274 7525;7526 7525 2 9606 Homo sapiens -0.03162772942118863 DSQLGFHR Unmodified 958.46208 0.46207815 802 A0A087WT38;Q96I51-2;Q96I51-3;Q96I51 WBSCR16 Williams-Beuren syndrome chromosomal region 16 protein yes no 0 0 0 5 0 1 34.442 34.53 3 0.0050665 7328 20230619_1885_Aki_TMTPro18x_K_F5 78.377 64.798 64013 57718 56027 59007 62986 67545 64337 64192 86456 60031 58499 54221 54610 57891 59146 52476 63365 51092 59168 52845 57697 59630 64953 67611 65453 65694 85636 60788 61147 55432 56171 59262 60254 52783 60501 48587 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28444000 4954 802 4695 9275 7527 7527 1 9606 Homo sapiens -0.018814405649095534 DSQPPAVPDNR Unmodified 1194.5629 0.56291441 1588 Q15154;Q15154-5;H0YBA1;D3DSQ0;A0A5H1ZRS1;B9EIS5;A2RUU9;Q15154-2;Q15154-4;A0A4W8VX11;E7EV93;Q15154-3;E9PGW9;E5RGQ4 PCM1 Pericentriolar material 1 protein yes no 0 0 0 2 0 1 34.667 34.724 2 9.5834E-09 7554 20230619_1881_Aki_TMTPro18x_K_F2 198.93 157.7 27186 11088 22032 36170 34688 38165 27333 28421 34810 22907 33976 40524 33083 29578 32823 17166 35153 37066 25020 10379 23082 34404 34858 38166 28214 29587 34960 24007 34905 39920 33788 30226 33420 18619 33625 34987 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35208000 4955 1588 4696 9276 7528 7528 1 9606 Homo sapiens -0.026584533727373127 DSQPPAVPDNRR Unmodified 1350.664 0.66402543 1588 Q15154;Q15154-5;H0YBA1;D3DSQ0;A0A5H1ZRS1;B9EIS5;A2RUU9;Q15154-2;Q15154-4;A0A4W8VX11;E7EV93;Q15154-3;E9PGW9;E5RGQ4 PCM1 Pericentriolar material 1 protein yes no 0 0 1 4 0 1 30.38 30.447 3 1.7751E-07 5700 20230619_1883_Aki_TMTPro18x_K_F4 147.33 130 14640 8891.6 14222 13944 17731 19251 14913 16876 21753 16195 20757 19200 15443 13556 18949 13353 21018 18368 13513 8190.7 14531 13730 18077 19002 15417 17378 21708 16504 21103 19161 16102 14163 19289 13722 20071 17402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55140000 4956 1588 4697 9277 7529 7529 1 9606 Homo sapiens 0.002719983299584783 DSQPWEQALGR Unmodified 1285.6051 0.60511357 2790 CON__Q03247 yes yes 0 0 0 4 0 1 50.827 50.859 2 0.003324 14374 20230619_1883_Aki_TMTPro18x_K_F4 115.91 87.403 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4957 2790 4698 9278 7530 7530 1 9606 Homo sapiens -0.026264779643724978 DSQSASGEERPPEADGK Unmodified 1758.7656 0.76564955 1307 P48634;A0A1U9X982;A0A1U9X9A9;A0A1U9X999;A0A1U9X998;A0A1U9X993;A0A1U9X988;A0A1U9X996;A0A1U9X985;A0A1U9X977;A0A1U9X975;A0A1U9X974;A0A1U9X9A5;A0A1U9X987;A0A1U9X972;P48634-3;P48634-2;P48634-4;B4DZ56 PRRC2A Protein PRRC2A yes no 0 0 1 1 0 1 34.082 34.082 3 0.01191 7634 20230619_1880_Aki_TMTPro18x_K_F1 63.681 46.801 7784.7 3699.8 8165 9532.1 9925.8 12237 9061.8 10529 12658 8770.8 12335 15010 14522 12220 10741 7279.1 14718 15758 7182.3 3440.8 8298.6 9167.4 10163 12113 9301.7 10826 12664 9155.8 12780 14842 14574 12446 11187 7881.5 14050 14874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8336600 4958 1307 4699 9279 7531 7531 1 9606 Homo sapiens -0.08338264619419533 DSQTQAILTK Unmodified 1103.5823 0.58225287 2750 Q13098-7;Q13098;Q13098-5;C9JFE4;A8K070;A0A096LPJ3;A0A096LP07;B4DND6;Q13098-6;Q59F65 GPS1 COP9 signalosome complex subunit 1 yes no 0 0 0 6.5 0.5 1 1 45.678 45.765 2 3.6623999999999995E-19 12011 20230619_1886_Aki_TMTPro18x_K_F6 274.5 153.45 108560 78545 95892 108350 109500 110050 100210 108210 142200 131360 138970 133140 147930 120600 105170 160140 149210 130810 100210 72184 98715 106960 112440 111120 102910 111280 142360 131610 143010 134730 148670 126880 110420 158490 142210 124620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61170000 4959 2750 4700 9280;9281 7532 7532 1 9606 Homo sapiens 0.034605029181648206 DSRDPMYR Unmodified 1038.4553 0.45527821 4550 Q9HCD5;Q5JY17 NCOA5 Nuclear receptor coactivator 5 yes no 0 0 1 2.5 0.5 1 1 29.893 29.974 3 0.0067811 5569 20230619_1882_Aki_TMTPro18x_K_F3 91.069 70.167 40039 26918 32384 38738 54499 48554 47450 42670 54914 38140 50591 46449 44643 41106 43246 46760 54131 47609 36923 24758 33894 38254 54604 48235 48449 43892 55284 39082 51821 46634 45721 42857 44618 46941 51642 45234 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22352000 4960 4550 4701 9282;9283 7533 7533 1 9606 Homo sapiens -0.06241121507810021 DSRPSQAAGDNQGDEVK Unmodified 1772.7925 0.79253301 3803 Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4 THRAP3 yes no 0 0 1 2 0.816 1 1 1 32.839 32.883 3 1.1162E-13 6827 20230619_1881_Aki_TMTPro18x_K_F2 162.42 119.24 322650 164060 431060 454620 673030 836520 524520 658870 612060 447320 718080 757900 643650 651270 610900 248560 734640 718910 298470 152740 432790 439430 676510 811760 540560 679120 621980 473200 728740 750960 658360 654080 626510 283920 701590 677900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 690310000 4961 3803 4702 9284;9285;9286 7534;7535;7536;7537 7535 4 9606 Homo sapiens -0.0629515600828654 DSSAPGGPPER Unmodified 1068.4836 0.48360145 4483 Q9C0E8-2;Q9C0E8;Q9C0E8-4;B7Z829;B7ZLA9;Q9C0E8-3;B7Z7F5 LNP;KIAA1715 Protein lunapark yes no 0 0 0 1.5 0.5 1 1 30.005 30.039 2 0.0085302 6026 20230619_1880_Aki_TMTPro18x_K_F1 83.499 69.729 11991 8026.1 14925 17175 23808 23047 16348 20522 16529 14073 27011 29234 19569 19447 25489 12415 27640 28139 11098 7424.2 15058 16648 23791 22790 16943 20961 17220 15022 26919 28641 20504 20010 25859 13512 26428 26558 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 14702000 4962 4483 4703 9287;9288 7538 7538 1 9606 Homo sapiens -0.047901003268407294 DSSDLPEESRR Unmodified 1289.5848 0.58477206 2367 B3KNW3;B4DR58;Q96RY7-2;Q96RY7 IFT140 Intraflagellar transport protein 140 homolog yes no 0 0 1 1 0 1 31.019 31.019 3 0.007798 6420 20230619_1880_Aki_TMTPro18x_K_F1 58.172 33.79 12960 10330 18016 15728 23032 19567 20774 21326 22110 16713 24160 24298 21555 17819 21049 14969 25743 21378 12020 9501 17936 15493 23403 19542 21124 21539 22504 17369 24580 24097 22056 18450 21635 15470 24555 20253 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5013800 4963 2367 4704 9289 7539;7540 7540 2 9606 Homo sapiens -0.04843693414841255 DSSGQHVDVSPTSQR Unmodified 1598.7285 0.72847619 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;A0A7I2V614;B4DEC3;Q71UF1;B4DW08 ACO2 Aconitate hydratase, mitochondrial yes no 0 0 0 2.5 0.5 1 1 30.295 30.377 3 1.1493E-08 5862 20230619_1881_Aki_TMTPro18x_K_F2 143.93 125.1 10125 6003.5 10713 12086 16701 16297 16569 15151 11631 12974 13378 21346 13475 11558 11191 10953 17729 20877 9351.1 5550.8 10933 11748 16835 16127 16556 15505 12211 13467 13704 20917 13648 12221 11779 11571 16922 19713 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33688000 4964 1050 4705 9290;9291 7541;7542 7541 2 9606 Homo sapiens -0.04693891374540726 DSSPHFQAEQR Unmodified 1300.5796 0.5796271 151 Q9UH99-2;Q9UH99;B4E2A6;A0A024R1P7;A0A8I5QKM0;B4DIU6;Q9UH99-3;B0QY60;A8K129;B0QY64;A0A024R1S6 SUN2;UNC84B SUN domain-containing protein 2 yes no 0 0 0 2.5 0.5 1 1 30.478 30.557 3 8.057400000000001E-31 5934 20230619_1881_Aki_TMTPro18x_K_F2 241.39 196.52 29449 19873 26255 28511 35919 35862 32093 34954 36546 30267 37382 35858 33011 27537 28520 28181 41452 40017 27176 18278 27090 28171 36425 35682 32724 35634 36988 31013 38105 35867 33625 28733 29790 28972 39526 37888 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76363000 4965 151 4706 9292;9293 7543 7543 1 9606 Homo sapiens -0.05863952486765811 DSSQILSASFDQTIR Unmodified 1666.8162 0.81622856 1896 A0MNN4;Q2TAY7;Q2TAY7-2 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes no 0 0 0 5.5 0.5 1 1 56.778 56.85 3 2.5434999999999997E-19 16789 20230619_1886_Aki_TMTPro18x_K_F6 168.78 131.6 34270 29784 34273 40664 31283 36724 36076 37958 51755 40399 37172 43531 43828 36731 38748 43918 45061 46457 31700 27349 34811 40108 32904 37452 36580 38768 51235 40815 39155 43797 44289 38499 39867 44145 43063 44093 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105600000 4966 1896 4707 9294;9295 7544;7545 7545 2 9606 Homo sapiens 0.009493094962408577 DSSSTNLESMDTS Unmodified 1372.53 0.53001888 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3;B3KM30 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 1 0 1 45.819 45.819 2 2.0744E-10 12660 20230619_1880_Aki_TMTPro18x_K_F1 178.22 167.07 27760 23588 28412 31204 29329 38790 30625 33878 48677 34500 34937 37082 43447 25552 29913 39126 47939 42377 25680 21654 28845 30976 30511 38513 31359 34954 47986 34939 36855 37139 43378 27514 31696 39247 45655 40236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95062000 4967 2126 4708 9296 7546 7546 1 9606 Homo sapiens -0.14134493068399934 DSSSTNLESMDTS Oxidation (M) 1388.5249 0.5249335 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3;B3KM30 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 1 0 1 0 1 38.009 38.009 2 0.00014148 9206 20230619_1880_Aki_TMTPro18x_K_F1 128.36 125.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4968 2126 4708 9297 7547 7547 1334 1 9606 Homo sapiens -0.15378796931008765 DSSTCPGDYVLSVSENSR Unmodified 1971.848 0.84799897 3590 P46109 CRKL Crk-like protein yes yes 0 0 0 3 0 1 51.899 51.965 3 0.0070632 15000 20230619_1882_Aki_TMTPro18x_K_F3 64.346 52.37 138790 106270 118190 106200 187230 237020 183280 173260 214270 202940 208540 190730 224640 191850 197690 228270 193920 200940 128130 97338 122820 109000 189230 228230 185870 182040 216350 203260 214800 194330 227460 199750 201470 227210 185630 191120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197020000 4969 3590 4709 9298 7548 7548 1 9606 Homo sapiens -0.09905110602790046 DSSVEVR Unmodified 790.3821 0.38209649 3242 O15371-2;O15371-3;O15371;B4E1K8;B0QYA5;B0QYA6 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 0 1 0 1 31.233 31.233 2 0.058677 6499 20230619_1880_Aki_TMTPro18x_K_F1 82.305 43.087 38533 22723 58277 55970 83490 75198 61562 81665 62119 35772 77017 82603 40280 59583 74718 24197 79578 73504 35719 21087 57898 53997 83939 74687 63442 81703 63682 40030 76804 80909 44083 60269 75354 27821 76050 69314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25780000 4970 3242 4710 9299 7549 7549 1 9606 Homo sapiens -0.021479269587530325 DSSYPFANK Unmodified 1027.4611 0.4610751 4082 Q5VZL5-2;Q5VZL5-4;Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes no 0 0 0 6 0 1 47.474 47.555 2 0.002713 12826 20230619_1886_Aki_TMTPro18x_K_F6 98.582 66.361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4971 4082 4711 9300 7550 7550 1 9606 Homo sapiens -0.05155699724468832 DSTEVEISTGER Unmodified 1321.5998 0.59975342 4383 Q96N67;Q96N67-6;Q96N67-2;Q96N67-5;Q96N67-3;Q96N67-4;A0A2X0SSK2;Q96N67-7;A0A1B0GUE9;A0A0U1RQT6 DOCK7 Dedicator of cytokinesis protein 7 yes no 0 0 0 1 0 1 39.669 39.669 2 1.2042E-06 9973 20230619_1880_Aki_TMTPro18x_K_F1 157.38 136.51 18830 13318 13862 16310 17645 22299 17161 21456 24817 21259 25545 26800 25015 19309 24330 27042 27518 29536 17359 12225 14569 16302 18067 22065 17575 21955 24863 21665 26159 26709 25505 20582 24945 27179 26313 28020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38410000 4972 4383 4712 9301 7551 7551 1 9606 Homo sapiens -0.04818246337481469 DSTFDLPADSIAPFHICYYGR Unmodified 2444.1107 0.11069602 4223 Q8N1G2 CMTR1 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 yes yes 0 0 0 7 0 1 62.411 62.447 3 1.7013E-05 18935 20230619_1887_Aki_TMTPro18x_K_F7 92.492 83.445 27779 24787 28994 32543 22023 30421 33438 28476 29770 43778 43603 46322 46803 38001 45787 55670 48812 51569 25710 22749 29281 32192 23760 30865 32947 29658 31138 43472 44256 46633 47602 40408 46801 55396 46692 49014 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125270000 4973 4223 4713 9302 7552 7552 1 9606 Homo sapiens -0.05359489866987133 DSTGAADPPQPHIVGIQSPDQQAALAR Unmodified 2739.3576 0.35761966 3138 J3KTF5;Q9BQ95;Q9BQ95-3 ECSIT Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial yes no 0 0 0 4 0 1 48.124 48.164 3 9.8421E-15 13144 20230619_1883_Aki_TMTPro18x_K_F4 102.95 96.582 7193.4 5322.5 5499.8 7327.4 8673.8 7982.8 7285.5 6729.6 8666.9 9846.3 11028 9184 9828.4 8558.4 8438.6 9112.6 10541 12005 6634.6 4890.9 5784.2 7238.2 8714.9 7997.7 7467.7 7046.7 8850.7 9764.4 11136 9335 10004 8884 8725.7 9307.6 10075 11366 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35951000 4974 3138 4714 9303 7553 7553 1 9606 Homo sapiens 0.057515158854585025 DSTLIMQLLR Oxidation (M) 1204.6486 0.64855829 2805;3709;3511;145;3701;3535;3536 D0PNI1;P63104;E7EX29;B0AZS6;P63104-2;B7Z2E6;H0YB80;Q2F831;P27348;B4DMT8;Q53S41;B4DY04;V9HWD6;P31946-2;P31946;B5BU24;A0A024R1K7;Q04917;B2R6N6;Q9H4N8;P31947-2;P31947;P61981;B3KNB4;B4DE78;B4DHC4;V9HW98;P62258;G9K389;G9K388;P62258-2;B7ZA86;K7EM20 YWHAZ;YWHAQ;HEL-S-1;YWHAB;YWHAH;SFN;YWHAG;HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon no no 0 1 0 2 0.816 1 1 1 62.328 62.341 2 0.0014945 19361 20230619_1880_Aki_TMTPro18x_K_F1 99.136 83.474 505650 453420 413650 516090 536020 558380 497460 482330 575420 275550 305220 195960 179720 166810 474560 213400 201580 178340 467140 415540 430240 516520 546120 559850 505980 492660 569990 287740 320210 202070 201370 175450 460880 212600 195350 169850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 419230000 4975 2805;3511;3535;145;3536;3701;3709 4715 9304;9305;9306 7554 7554 60 1 9606 Homo sapiens 0.05441995488581597 DSTLIMQLLR Unmodified 1188.6536 0.65364367 2805;3709;3511;145;3701;3535;3536 D0PNI1;P63104;E7EX29;B0AZS6;P63104-2;B7Z2E6;H0YB80;Q2F831;P27348;B4DMT8;Q53S41;B4DY04;V9HWD6;P31946-2;P31946;B5BU24;A0A024R1K7;Q04917;B2R6N6;Q9H4N8;P31947-2;P31947;P61981;B3KNB4;B4DE78;B4DHC4;V9HW98;P62258;G9K389;G9K388;P62258-2;B7ZA86;K7EM20 YWHAZ;YWHAQ;HEL-S-1;YWHAB;YWHAH;SFN;YWHAG;HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon no no 0 0 0 3 0.816 1 1 1 63.55 63.566 2 1.3381E-13 20210 20230619_1881_Aki_TMTPro18x_K_F2 227.62 170.57 3204500 2847600 2809000 3265300 1416200 3942600 1880900 3834400 2363300 1715000 1619300 1054500 1116800 933720 2807000 1228200 1238500 1035600 2961700 2610000 2870100 3272300 1520200 3925900 1891800 3862000 2347900 1826000 1673800 1099700 1234700 983210 2729200 1223900 1198800 986400 2 2 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 3448599999.9999995 4976 2805;3511;3535;145;3536;3701;3709 4715 9307;9308;9309 7555;7556 7555 2 9606 Homo sapiens 0.06686299351213165 DSTLTEPVVMALLK Unmodified 1515.8218 0.82183121 1806 H0YJU0;Q86U13;Q96B13;Q96L51;Q96L52;Q7L7W2;A0A8Q3WKR3;Q13362-2;Q13362-3;Q13362;Q13362-4;Q13362-5 PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform yes no 0 0 0 8 0 1 64.435 64.456 3 1.0126E-08 19740 20230619_1888_Aki_TMTPro18x_K_F8 154.28 133.05 38739 29879 36138 37819 28774 38375 35243 33818 45932 47519 41274 42046 54057 41959 35793 53096 53506 47225 35788 27426 36831 37546 30721 38645 35498 35238 46038 47137 43108 42930 53890 43891 37787 52798 50979 44940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128000000 4977 1806 4716 9310 7557 7557 1 9606 Homo sapiens 0.08455316754361775 DSTTDEQLFR Unmodified 1210.5466 0.54659564 2637 B4E069;H0YLH3;Q6FHF7;Q92696;D3DS70 RABGGTA Geranylgeranyl transferase type-2 subunit alpha yes no 0 0 0 1 0 1 44.884 44.884 2 2.3681E-05 12248 20230619_1880_Aki_TMTPro18x_K_F1 158.57 134.99 35459 26097 34190 36840 37460 40708 34831 36981 49254 42642 44102 49599 36384 41070 42633 42019 51769 48255 32758 23988 34897 36359 38606 40778 35726 38188 49138 43021 45198 49711 37761 42653 43742 42567 49419 45780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31645000 4978 2637 4717 9311 7558 7558 1 9606 Homo sapiens -0.05025579329480934 DSTVAVVVYDITNVNSFQQTTK Unmodified 2428.2122 0.21218421 342 P20340;A0A024R5J5;B7Z5Z9 RAB6A Ras-related protein Rab-6A yes no 0 0 0 8 0 1 64.601 64.622 3 1.8323E-18 19811 20230619_1888_Aki_TMTPro18x_K_F8 169.39 90.596 19638 13195 21570 21949 17748 12511 14750 19175 19389 19551 20155 20947 18704 24070 26733 22660 28700 29031 18153 12158 21678 21322 18605 13531 15222 19141 19528 19779 20602 21310 19579 24626 27128 23165 27443 27505 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44375000 4979 342 4718 9312 7559 7559 1 9606 Homo sapiens 0.055206600365636405 DSVFLSCSEDNR Unmodified 1427.5987 0.59870757 93 A0A024R0H7;Q9BQA1;H0Y711;Q9BQA1-2 WDR77 Methylosome protein 50 yes no 0 0 0 2 0.816 1 1 1 46.658 46.71 3 8.6771E-10 12920 20230619_1881_Aki_TMTPro18x_K_F2 176.78 171.62 91652 53711 95065 102360 119530 129880 116530 114770 124240 114390 118500 124600 127240 110740 120190 87520 159310 128670 84624 49622 96704 99637 122100 128810 117900 118270 125920 115970 122300 125440 129310 113520 124300 90750 151840 121890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 263510000 4980 93 4719 9313;9314;9315 7560 7560 1 9606 Homo sapiens -0.09798783978021675 DSVNPGVMVLLGCGALSSTCGQLASYPLALVR Unmodified 3304.6618 0.66178888 2648 B7ZB41;B4E290;Q6NUK1-2;Q6NUK1 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes no 0 0 0 5 0 1 66.406 66.449 3 7.152399999999999E-22 20762 20230619_1885_Aki_TMTPro18x_K_F5 146.89 140.01 1811.7 1235.9 1300.5 1509.7 897.26 1239.7 1798.7 1425.5 2229.1 1240.7 1065.8 1856.3 2284.5 1687.8 1764.4 1303.3 999.79 979.14 1669.6 1134.7 1359.5 1498.9 991.81 1277.8 1772.4 1440.7 2197.6 1284.7 1207.2 1847.4 2265.7 1726.2 1758.4 1300.3 963.84 933.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8815100 4981 2648 4720 9316 7561 7561 1 9606 Homo sapiens 0.10164445211830753 DSVPSLQGEK Unmodified 1058.5244 0.52440364 3693 P61244;P61244-2;Q8TAX8;G3V563;Q8IYC6;G3V2R5;A0A024R682;Q6V3B1;P61244-3;P61244-4;A0A494C130;P61244-5;P61244-6 MAX Protein max yes no 0 0 0 4.5 0.5 1 1 45.188 45.249 3 0.00057037 11752 20230619_1883_Aki_TMTPro18x_K_F4 98.257 67.693 366730 106820 206910 250290 211330 201500 171270 166160 231850 100170 104200 84390 86523 73119 113960 83442 103950 96911 336520 99558 223640 240000 218430 206490 176910 170660 227300 104590 112060 86108 90226 76391 114670 84538 99503 91930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60524000 4982 3693 4721 9317;9318 7562 7562 1 9606 Homo sapiens -0.0025175900723297673 DSVVAGFQWATK Unmodified 1307.651 0.65100113 3447 P13639;Q8TA90;B4DPU3;Q6W6M8 EEF2 Elongation factor 2 yes no 0 0 0 3.67 3.09 1 1 1 60.746 60.76 3 1.1408E-09 18907 20230619_1881_Aki_TMTPro18x_K_F2 171.26 144.63 1066400 870600 978360 936000 787300 1011100 990270 994420 1151800 1389500 1190000 1143200 1385600 1169600 1070600 1357400 1268700 1307000 985350 797730 998170 941510 839870 1016500 992140 1027300 1167300 1375400 1227100 1172400 1393000 1215800 1106700 1357400 1212200 1241800 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1994699999.9999998 4983 3447 4722 9319;9320;9321 7563;7564;7565;7566 7565 4 9606 Homo sapiens 0.009481672178935696 DSWNAGIMTVMSALSVAPSK Unmodified 2064.002 0.001997195 1164 A0A140TA86;Q5XKP0 QIL1 Protein QIL1 yes no 0 0 0 5 0 1 66.32 66.363 3 9.1606E-08 20702 20230619_1885_Aki_TMTPro18x_K_F5 102.98 94.478 26030 17967 21670 24790 23977 29640 32505 33756 32767 29204 34627 33319 36454 32136 30207 34168 41085 41175 24012 16515 22442 24536 24978 29678 32283 34067 33418 29884 35508 33617 36867 33302 31447 34683 39205 39033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61050000 4984 1164 4723 9322 7567 7567 1 9606 Homo sapiens 0.012556276290524693 DSWVDIFR Unmodified 1036.4978 0.49779495 2802 CON__Q3ZBS7 yes yes 0 0 0 6 0.816 1 1 1 62.623 62.667 2 0.00014084 19295 20230619_1886_Aki_TMTPro18x_K_F6 174.69 103.34 + 290570 272120 296120 442640 708320 917640 431800 459320 1632400 1398600 2497200 3555400 790330 2078300 1803000 1299800 1912900 3221100 268970 250340 307590 438160 699500 880890 488370 526720 1625100 1429200 2454000 3454600 918250 2145900 1819500 1428000 1838200 3034200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3040499999.9999995 4985 2802 4724 9323;9324;9325 7568;7569 7568 2 9606 Homo sapiens -0.01899403107904618 DSYDSYATHNE Unmodified 1300.4844 0.48438931 3874 Q14011;Q53XX5 CIRBP Cold-inducible RNA-binding protein yes no 0 0 0 2 0.707 1 2 1 37.388 37.418 2 2.7088E-06 8934 20230619_1880_Aki_TMTPro18x_K_F1 163.91 158.27 163100 114470 131610 164060 180660 186300 170810 180980 232760 195990 232330 258960 197320 189700 156480 205190 267420 264840 150440 105260 137230 161800 183590 186560 174680 185660 233430 199220 236940 257540 200830 198730 166230 209130 254780 250930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 642280000 4986 3874 4725 9326;9327;9328;9329 7570;7571;7572 7570 3 9606 Homo sapiens -0.1538335046843713 DSYESYGNSR Unmodified 1176.4683 0.46834532 3564;3963 P38159;P38159-2;B4E352;B3KRG5;H3BUY5;Q96E39;Q2VIN3 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 0 0 2 0.816 1 1 1 34.725 34.765 2 1.3424E-14 7546 20230619_1881_Aki_TMTPro18x_K_F2 241.4 223.67 195270 106160 198330 207030 298740 314320 235820 258190 308020 257730 328810 307160 318170 274530 254470 164630 354660 319870 180210 98154 202750 201970 300670 308250 243700 267490 310370 262160 335650 308260 322100 278680 264860 176230 338130 302290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 782160000 4987 3564;3963 4726 9330;9331;9332 7573;7574;7575 7574 3 9606 Homo sapiens -0.11283011914702001 DSYGGPPR Unmodified 847.38243 0.38243085 3564;3963 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;B3KRG5;H3BUY5;Q96E39;Q2VIN3 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 0 0 2.5 1.12 1 1 1 1 31.927 31.978 2 0.00029552 6465 20230619_1881_Aki_TMTPro18x_K_F2 167.24 88.09 234480 129680 247550 265960 388300 485570 306400 358270 479960 225070 338580 326210 312210 286040 283250 141140 347230 331930 216480 119980 252680 259860 390760 470900 318970 370960 472530 238310 352690 325070 318330 288870 291240 155360 331510 313300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 563560000 4988 3564;3963 4727 9333;9334;9335;9336 7576;7577;7578 7576 3 9606 Homo sapiens -0.047365072388970475 DSYGGPPRR Unmodified 1003.4835 0.48354187 3564;3963 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;B3KRG5;H3BUY5;Q96E39;Q2VIN3 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 0 1 5.5 0.5 1 1 27.282 27.335 3 0.00019998 4772 20230619_1885_Aki_TMTPro18x_K_F5 120.87 59.19 69469 44262 70501 73233 93997 94677 88965 92285 101990 85458 105150 106540 107970 87705 92912 70318 135570 119450 64155 40791 71897 71819 95574 94027 90398 94238 103230 87392 107860 106510 109400 90264 96953 73769 129190 112990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75282000 4989 3564;3963 4728 9337;9338 7579;7580 7579 2 9606 Homo sapiens -0.018060555361898878 DSYVGDEAQSK Unmodified 1197.515 0.51496116 3112;3679;2695;3167 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;A6NL76;B3KW67;Q7Z7J6;A0A804HKV3;B4DUI8;B7Z6I1;F6QUT6;F6UVQ4;C9JFL5;B8ZZJ2;F8WB63;P63261;I3L4N8;Q8WVW5;B4E3A4;B4DVQ0;A0A6Q8PFE4;I3L3I0;I3L1U9;J3KT65;I3L3R2;A1E282;K7EM38;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;E7EVS6;A0A2R8Y793;B3KUD3;A0A2R8YGF8;A0A6Q8PH58;G5E9R0;C9JZR7;C9JUM1;C9JTX5 ACTA1;ACTC1;ACTA2;ACTG2;ACTG1;ACTB;PS1TP5BP1 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 0 0 3.86 2.1 1 1 1 2 1 1 40.45 40.493 2 1.2479E-39 10289 20230619_1880_Aki_TMTPro18x_K_F1 306.51 258.66 1047800 508380 1255000 1359900 2311300 2634400 1553400 2033100 2168000 1331600 1940400 2056900 1922700 1744300 1689100 685770 1994400 1761300 968020 473100 1274200 1317600 2298200 2550800 1629800 2097500 2162200 1407300 2001100 2042500 1952500 1754300 1732600 770180 1903700 1662300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7028899999.999999 4990 2695;3112;3167;3679 4729 9339;9340;9341;9342;9343;9344;9345 7581;7582;7583;7584;7585;7586 7581 6 9606 Homo sapiens -0.0758957208342963 DTAASGYGTQNIR Unmodified 1352.6321 0.6320566 796 A8K670;A0A075B6F9;Q9Y314;M0R3B2;M0R1T7;M0QX85;B4DUN3;M0R1K2 NOSIP Nitric oxide synthase-interacting protein yes no 0 0 0 4 0 1 37.14 37.184 2 1.7501E-46 8398 20230619_1883_Aki_TMTPro18x_K_F4 265.12 224.09 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4991 796 4730 9346 7587 7587 1 9606 Homo sapiens -0.03015414143783346 DTAAWTVGR Unmodified 975.47739 0.47739386 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9;J3QKQ5 KPNB1 Importin subunit beta-1 yes no 0 0 0 6 0.816 1 1 1 43.675 43.759 2 0.00060941 11096 20230619_1885_Aki_TMTPro18x_K_F5 129.72 98.432 826490 715240 815090 715590 807680 902900 910010 854910 927850 956570 995900 929130 1089200 839070 953080 979450 1056600 949360 764420 654830 828280 725820 842210 898080 912310 879310 947280 960420 1022200 941650 1101600 876340 977340 980360 1009200 902420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1357100000 4992 3904 4731 9347;9348;9349 7588;7589 7588 2 9606 Homo sapiens -0.011325737677225334 DTADVVHPFFLAQK Unmodified 1586.8093 0.80929269 587 A0A024R9P0;Q9NVX0-3;Q9NVX0 CEP27;HAUS2 HAUS augmin-like complex subunit 2 yes no 0 0 0 7 0 1 57.296 57.351 3 0.00019751 16710 20230619_1887_Aki_TMTPro18x_K_F7 76.588 47.612 63606 59258 61147 76035 70586 82147 72162 79675 82991 79609 72739 82964 84229 77508 74017 88455 85454 92322 58847 54365 62558 75462 72662 82528 73017 81549 83568 80566 75687 83862 85172 80691 76157 88891 81699 87621 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8687500 4993 587 4732 9350 7590 7590 1 9606 Homo sapiens 0.039360414063139615 DTAQQGVVNFPYDDFIQCVMSV Oxidation (M) 2548.125 0.12502546 2734 C9J0K6;P30626-2;P30626;B4DHQ6 SRI Sorcin yes no 0 1 0 5.5 1.12 1 1 1 1 66.7 66.73 3 5.1791E-05 21046 20230619_1886_Aki_TMTPro18x_K_F6 73.448 69.716 17816 17291 21900 23941 24068 25400 22494 21573 19953 21927 26265 25180 25589 17203 22521 21445 21816 23059 16524 15874 21949 23640 24755 25486 22707 22324 20732 22229 26614 25145 25952 18254 22911 21577 20889 21880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 39593000 4994 2734 4733 9351;9352;9353;9354 7591;7592 7591 1640 2 9606 Homo sapiens -0.0871120550100386 DTAQQGVVNFPYDDFIQCVMSV Unmodified 2532.1301 0.13011083 2734 C9J0K6;P30626-2;P30626;B4DHQ6 SRI Sorcin yes no 0 0 0 6 0.816 1 1 1 68.913 68.949 3 0.009525 21678 20230619_1887_Aki_TMTPro18x_K_F7 53.553 51.177 5363.2 3090.8 4209.8 3064.3 3642.3 2261.8 3845.4 4046.1 3007.6 5118.9 4431.1 5751 4509.6 4988.2 4976 4203.1 5949.3 3196.2 4941.2 2834.6 4353.8 3005.1 3736.7 2368.6 3838.9 4038 3033.9 5010.1 4446.1 5774.1 4630.6 5121.1 4994.5 4067 5663.7 3036.2 3 3 3 2 2 2 2 3 1 2 2 3 3 3 2 2 3 2 14433000 4995 2734 4733 9355;9356;9357 7593;7594 7594 2 9606 Homo sapiens -0.07466901638417767 DTASLSTTPSESPR Unmodified 1447.6791 0.67906638 2679 B7Z4J7;F5H039;B7Z2B5;Q9NQX3;Q9NQX3-2;B7Z374;G3V582;H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 3 0 1 37.857 37.91 3 2.3284E-16 8736 20230619_1882_Aki_TMTPro18x_K_F3 162.72 150.17 36197 30796 33389 36706 39688 36204 35789 40948 43512 40913 42385 46932 45368 41826 41682 45424 51016 46185 33457 28241 34252 36587 40580 36782 36570 41493 43857 41529 43702 47186 46066 43485 42982 45628 48688 43876 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63510000 4996 2679 4734 9358 7595 7595 1 9606 Homo sapiens -0.026865993833325774 DTAVQGNIR Unmodified 972.49886 0.49885759 1429 A0A384MQX5;Q9UBV8 PEF1 Peflin yes no 0 0 0 3.5 0.5 1 1 33.453 33.513 2 6.8052E-05 6966 20230619_1882_Aki_TMTPro18x_K_F3 171.53 141.96 73205 35184 85347 89842 117240 128830 92544 112110 108550 66188 118050 130390 93312 95028 112120 45312 120270 110720 67609 32712 86187 86624 118580 126790 95310 114420 109840 71353 119700 128150 97010 96537 113740 50235 114920 104510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63514000 4997 1429 4735 9359;9360 7596;7597 7596 2 9606 Homo sapiens 0.011508112610044918 DTAYPETNDAIPMISK Unmodified 1764.824 0.82401605 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 4 0.816 1 1 1 57.327 57.36 3 1.1409E-05 16804 20230619_1885_Aki_TMTPro18x_K_F5 100.43 83.76 28132 27349 32512 35129 30781 39655 35089 33748 36722 40496 38257 37286 43654 39290 39274 45107 46135 46591 26077 25087 32661 34887 32253 39605 35189 35070 37411 40474 39414 38075 44195 40770 40424 45301 44078 44235 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137200000 4998 4191 4736 9361;9362;9363 7598 7598 1 9606 Homo sapiens -0.027802992985016317 DTDDVPMILVGNK Unmodified 1415.6966 0.6966307 655 P61224;P61224-3;A0A024RB87;F5H7Y6;E7ESV4;F5GX62;A6NIZ1;P61224-4;Q9BXV4;F5H004;B7ZB78;F5GZG1;F5H823;F5H6R7 RAP1B Ras-related protein Rap-1b;Ras-related protein Rap-1b-like protein yes no 0 0 0 4 0.816 1 1 1 60.797 60.824 3 0.018382 18670 20230619_1883_Aki_TMTPro18x_K_F4 59.898 44.696 73059 58342 75071 82880 74482 95521 76020 85553 121150 84947 87618 118620 113170 95981 85000 134730 120020 151040 67561 53614 76141 81811 77643 95340 77964 88070 119450 86987 92762 118110 113410 101800 89148 135510 114710 143170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168820000 4999 655 4737 9364;9365;9366 7599 7599 1 9606 Homo sapiens 0.005410246179735623 DTDFEHR Unmodified 918.38316 0.38315913 3469 P17858;P17858-2;Q7L2M7;Q9BSP4;B3KNQ7 PFKL ATP-dependent 6-phosphofructokinase, liver type yes no 0 0 0 1 0 1 30.45 30.45 3 1.9376E-06 6145 20230619_1880_Aki_TMTPro18x_K_F1 196.98 184.02 30548 17471 36699 36611 47527 45352 37670 39714 47316 31678 54522 60149 39736 42528 53091 21352 52915 50935 28241 16168 36918 35479 48188 45048 38872 40758 47853 33333 55010 59110 41709 43311 53562 23566 50616 48072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34424000 5000 3469 4738 9367 7600 7600 1 9606 Homo sapiens -0.07929712589850624 DTDGGPKEEESPV Unmodified 1358.5838 0.58376901 90 B4DKS0;A0A024R0H1;P53985;B2R6A5 SLC16A1 Monocarboxylate transporter 1 yes no 0 0 1 1.5 0.5 1 1 41.391 41.43 2 0.070308 10485 20230619_1881_Aki_TMTPro18x_K_F2 36.424 20.535 69330 43729 74381 71059 90997 101250 90296 91115 106910 96726 114960 128130 104160 86678 94092 97509 131930 118790 64054 40292 75378 69879 93194 99814 91602 93912 108240 98403 117170 127170 106190 91364 97954 99000 125770 112650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113820000 5001 90 4739 9368;9369 7601 7601 1 9606 Homo sapiens -0.08117952574389165 DTDIQGFLK Unmodified 1035.5237 0.52367535 4222 Q8N1F7;A8K897;H3BVG0;H3BV11;H3BRI8;H3BM93;H3BNN5 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 5.5 0.5 1 1 56.312 56.38 2;3 1.8478E-10 16393 20230619_1885_Aki_TMTPro18x_K_F5 185.72 125.24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5002 4222 4740 9370;9371 7602;7603 7602 2 9606 Homo sapiens 0.007334463437018712 DTDIVDEAIYYFK Unmodified 1590.7454 0.74535503 2206 Q2LE71;B2R4D5;O15145;B4DM63;F8VR50;C9JZD1 ARPC3 Actin-related protein 2/3 complex subunit 3 yes no 0 0 0 4 0.816 1 1 1 65.501 65.53 3 0.0011568 20765 20230619_1882_Aki_TMTPro18x_K_F3 83.314 70.214 9760 7438 7639.1 9644.2 11506 11756 8283.8 10196 13689 11775 8662.1 10010 11260 9246.4 9291.3 12694 11453 12926 9004.7 6829.5 8003.3 9580.9 11569 11694 8706.2 10559 13450 11769 9244 10212 11319 9750.1 9621.2 12702 10947 12270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174120000 5003 2206 4741 9372;9373;9374 7604 7604 1 9606 Homo sapiens -0.026387835412833738 DTDSEEEIR Unmodified 1092.4571 0.45711193 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;Q9BRL5;A8K1M2;Q96HY3;A0A590UJI2;G3V361;G3V226;A0A590UJC0 CALM3;CALM2;CALM1 yes no 0 0 0 1 0 1 33.343 33.343 2 3.3085E-17 7305 20230619_1880_Aki_TMTPro18x_K_F1 251.33 229.2 447390 201200 564530 582180 608840 791290 582430 691840 666850 486190 778790 1096700 791350 873220 724880 347430 1087900 1213300 413420 187660 564640 558510 628900 780750 591940 708110 678060 521150 796480 1076200 805740 880340 756110 407330 1038200 1142700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1118100000 5004 2325 4742 9375 7605;7606 7605 2 9606 Homo sapiens -0.0854183400886086 DTDSEEEIREAFR Unmodified 1595.7063 0.70634376 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;Q9BRL5;A8K1M2;Q96HY3;A0A590UJI2;G3V361;G3V226;A0A590UJC0 CALM3;CALM2;CALM1 yes no 0 0 1 2 0.816 1 1 1 46.456 46.508 3 1.396E-45 12885 20230619_1880_Aki_TMTPro18x_K_F1 292.79 259.01 718600 687270 714190 687330 642320 681070 773860 742030 753510 700190 773330 733290 831240 746080 829270 896460 797710 954280 665130 629010 724610 694730 675930 691060 772220 752910 769400 710950 795040 744030 846630 777090 841990 901460 764630 905190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11520000000 5005 2325 4743 9376;9377;9378 7607;7608 7607 2 9606 Homo sapiens -0.06768115842987754 DTDSINLYK Unmodified 1067.5135 0.5135046 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;A0A7I2YQX3;B3KWD0 XPO1 Exportin-1 yes no 0 0 0 4.5 0.5 2 2 50.008 50.063 2;3 2.6094E-06 13767 20230619_1885_Aki_TMTPro18x_K_F5 189 144.61 320420 252310 286580 319470 339310 370300 339130 319370 428060 399950 442610 417920 417890 386770 385970 486980 501720 478270 295950 231580 294920 317700 348460 369450 344650 332000 431540 400600 452130 422640 426120 405130 399990 486970 478760 454440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 776360000 5006 3228 4744 9379;9380;9381;9382 7609;7610 7610 2 9606 Homo sapiens -0.017551613815157907 DTEAGETFSSVQANLSK Unmodified 1782.8272 0.82718718 3546 P35251-2;P35251;Q14756 RFC1;LLDBP Replication factor C subunit 1 yes no 0 0 0 4 0 1 54.097 54.113 3 1.328E-10 15852 20230619_1883_Aki_TMTPro18x_K_F4 144.29 129.86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5007 3546 4745 9383 7611 7611 1 9606 Homo sapiens -0.032913329201392116 DTEEVELK Unmodified 961.46041 0.4604064 1136 B3KQF0;A0A0S2Z5M1;Q9UGP8;B3KWU4;A0A0S2Z518 SEC63 Translocation protein SEC63 homolog yes no 0 0 0 1 0 1 45.207 45.207 2 0.0016051 12373 20230619_1880_Aki_TMTPro18x_K_F1 115.49 32.489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5008 1136 4746 9384 7612 7612 1 9606 Homo sapiens -0.02186539164176793 DTEMLATGAQDGK Unmodified 1335.5976 0.59764493 1896 A0MNN4;Q2TAY7;Q2TAY7-2 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes no 0 0 0 3 0 1 46.314 46.392 3 0.0067208 12482 20230619_1882_Aki_TMTPro18x_K_F3 55.841 32.956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5009 1896 4747 9385 7613 7613 1 9606 Homo sapiens -0.05672998346926761 DTEPGPASGGTLGPSGEEAPRPR Unmodified 2234.0564 0.056352265 4146 Q765P7 MTSS1L MTSS1-like protein yes yes 0 0 1 3 0 1 38.407 38.46 3 0.033216 8974 20230619_1882_Aki_TMTPro18x_K_F3 45.737 6.2284 7004.4 6756.3 11160 9893.9 10522 10931 9251.4 13281 12775 8924.7 13619 13284 12580 11132 9570.9 9966.5 12653 14340 6515.8 6206.8 10971 9751 10935 11025 9528.4 13278 12829 9386.6 13879 13220 12733 11494 9957.8 10279 12089 13567 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11710000 5010 4146 4748 9386 7614 7614 1 9606 Homo sapiens -0.011313656941638328 DTEPLIQTAK Unmodified 1114.587 0.58700389 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;Q96GI1 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 4 0 1 47.326 47.368 2 6.624E-11 12763 20230619_1883_Aki_TMTPro18x_K_F4 250.06 205.62 184230 129120 125510 167360 153010 215400 159770 156100 314420 229000 249950 360480 377820 341810 181170 715020 228290 586080 169750 118600 133100 166360 157800 212680 165330 165600 308810 231890 265500 360080 372450 372500 193460 703460 220440 556710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 346380000 5011 2633 4749 9387 7615 7615 1 9606 Homo sapiens 0.034293870609417354 DTEQVDNWMSK Unmodified 1351.5714 0.57143018 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 3 0 1 53.055 53.114 2 0.021552 15533 20230619_1882_Aki_TMTPro18x_K_F3 72.2 61.677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5012 1022;3868 4750 9388 7616 7616 1 9606 Homo sapiens -0.09029267518417328 DTFEHDPSESIDEFNK Unmodified 1908.8014 0.80136636 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8;Q9NYF8-4;E9PJA7 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 0 1.67 0.471 1 2 51.006 51.029 3 1.8119E-14 14902 20230619_1881_Aki_TMTPro18x_K_F2 172.43 149.06 24125 20227 20785 27210 20996 32006 25912 26792 36672 31482 26504 46407 41049 42098 26636 54545 55165 75329 22286 18573 21447 26949 22022 31852 26164 27864 36356 32041 28428 46254 40844 44218 29073 55671 52646 71254 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138920000 5013 4629 4751 9389;9390;9391 7617;7618 7618 2 9606 Homo sapiens -0.11668227162431322 DTFLGPVLK Unmodified 988.55933 0.55933258 4730 Q9Y3T9;B3KNC3;Q9H9J5;B4DY21 NOC2L Nucleolar complex protein 2 homolog yes no 0 0 0 8 0 1 59.428 59.469 2 0.00079254 17586 20230619_1888_Aki_TMTPro18x_K_F8 143.89 95.971 107280 95862 99407 112650 102290 124780 124450 111610 122070 130650 95901 114040 146470 100980 109970 161970 142500 155390 99198 87881 101790 112540 106690 124950 124080 115470 123630 130510 101960 116090 146040 107950 114550 161230 136120 147610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45604000 5014 4730 4752 9392 7619 7619 1 9606 Homo sapiens 0.06459528591381059 DTFTPSGQEPILTEK Unmodified 1661.8148 0.81483158 275;1599 A0A024R3Z1;Q6NYC5;E7EV03;A0A669KB77;P11137-3;P11137 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 0 4 0 1 54.357 54.373 3 0.0015353 15951 20230619_1883_Aki_TMTPro18x_K_F4 81.311 61.733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5015 275;1599 4753 9393 7620 7620 1 9606 Homo sapiens 0.010396754074690762 DTFTVEAHSNETIGSVR Unmodified 1861.8806 0.88061973 1150 A0A0U1RQI9;Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes no 0 0 0 3 0 1 43.732 43.802 3 0.00031718 11313 20230619_1882_Aki_TMTPro18x_K_F3 77.468 66.524 37188 31447 42556 39526 45289 44452 48824 46948 80847 39744 56771 52711 45394 46320 52296 52262 68198 55124 34435 28854 42803 39333 46922 44645 49981 47607 79402 41038 58853 52755 47107 48262 53929 52589 65007 52375 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39152000 5016 1150 4754 9394 7621 7621 1 9606 Homo sapiens -0.01584535417623556 DTFYIFNHVDIK Unmodified 1510.7456 0.7456298 9 B3KSG9;A0A024QYR8;Q99805 TM9SF2 Transmembrane 9 superfamily member 2 yes no 0 0 0 7.5 0.5 1 1 60.255 60.296 3 0.00014619 17917 20230619_1888_Aki_TMTPro18x_K_F8 105.03 73.801 89711 70095 72284 81618 72258 86395 95754 94112 119230 98671 91773 92038 99856 95563 94305 116170 99426 118410 82796 64285 74956 81563 75813 87170 95865 95725 118990 99328 95815 93896 101490 99519 96406 116460 95212 112370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71050000 5017 9 4755 9395;9396 7622 7622 1 9606 Homo sapiens 0.01068680969228808 DTGIFLDLMHLK Unmodified 1401.7326 0.73262227 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 3.67 3.09 1 1 1 63.446 63.456 3 8.8098E-10 19302 20230619_1888_Aki_TMTPro18x_K_F8 176.51 129.92 747630 615360 681890 712110 599500 780720 748690 731220 893780 854150 840000 838870 592380 1068800 558210 1204800 543900 1042700 690830 564210 697260 712260 634500 782970 750790 753770 899870 856790 853390 860870 614700 1099200 571400 1197600 524000 990220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1120400000 5018 150 4756 9397;9398;9399 7623;7624;7625 7625 3 9606 Homo sapiens 0.047825265854953614 DTGKTPVEPEVAIHR Unmodified 1647.858 0.8580338 3681 P60866;P60866-2;E5RJX2;E5RIP1 RPS20 40S ribosomal protein S20 yes no 0 0 1 4 0.816 1 1 1 39.614 39.676 4 3.7994E-10 9382 20230619_1883_Aki_TMTPro18x_K_F4 150.59 118.5 129380 131570 153120 141250 156300 136120 161430 145480 113650 126140 143790 78575 85343 58143 167850 59590 56163 41220 120000 120460 153510 141900 161730 138410 161060 147500 119690 126970 143290 81365 92610 60811 162470 59209 54712 39400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 924610000 5019 3681 4757 9400;9401;9402 7626 7626 1 9606 Homo sapiens 0.06001909975407216 DTGLGLSPTASLR Unmodified 1286.683 0.68302954 2768 CON__ENSEMBL:ENSBTAP00000024146 yes yes 0 0 0 7.5 0.5 1 1 49.903 49.979 2 1.8352E-27 13555 20230619_1887_Aki_TMTPro18x_K_F7 249.22 205.78 + 37925 55161 57392 44653 186840 227880 122370 118460 182750 50202 72247 106770 52549 61017 94351 61005 84343 108930 35387 50351 58616 48305 182340 213930 128750 126600 177950 56458 78764 104190 56416 64397 94478 64084 80966 102870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78876000 5020 2768 4758 9403;9404 7627 7627 1 9606 Homo sapiens 0.051155349010286955 DTGLPGCQSSLLR Unmodified 1402.6875 0.68746299 357 B4DZH5;A0A024R5T1;A0A024R5Z0;Q99081;Q99081-3;B4DGI9;H0YNQ5 TCF12 Transcription factor 12 yes no 0 0 0 6.5 0.5 1 1 48.263 48.346 2 7.3953E-21 12822 20230619_1887_Aki_TMTPro18x_K_F7 227.14 185.25 73552 52888 59658 62400 48030 54434 57068 60812 56835 64884 67187 53960 62951 55635 57239 70109 65550 62907 67854 48527 61591 62157 51091 55806 57062 61793 58355 65000 68171 55400 64126 58093 58836 69782 62619 59836 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69107000 5021 357 4759 9405;9406 7628 7628 1 9606 Homo sapiens 0.00222676052294446 DTGNFVIGQILSDQSR Unmodified 1748.8693 0.86932676 1981 P09884;A6NMQ1 POLA1 DNA polymerase alpha catalytic subunit;DNA polymerase yes no 0 0 0 7.5 0.5 1 1 62.199 62.231 3 0.012595 18802 20230619_1887_Aki_TMTPro18x_K_F7 61.167 49.727 128070 110550 117170 128130 114920 128810 133830 124990 136460 146660 140690 139360 152710 130790 135080 164160 152990 172910 118380 101340 119970 127990 120070 130140 133940 128580 139130 146820 144670 141540 154660 136990 138830 164820 146340 164070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117180000 5022 1981 4760 9407;9408 7629 7629 1 9606 Homo sapiens 0.024846872788884866 DTGNIGQER Unmodified 988.45739 0.4573867 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 31.062 31.095 2 0.00058999 6116 20230619_1881_Aki_TMTPro18x_K_F2 130.41 93.711 27547 15441 32420 29191 51221 53787 43254 53327 48769 25475 52505 58806 35964 46287 51390 14266 58719 53184 25459 14267 32793 28658 51470 52475 44264 53721 49390 28275 53040 57709 38073 46427 52176 17161 56073 50123 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40656000 5023 2337;3778;3779 4761 9409;9410 7630;7631 7631 2 9606 Homo sapiens -0.037303694983279456 DTGQLYAALHHR Unmodified 1380.6898 0.68984625 2698 Q9H6Z4;Q9H6Z4-2;Q9H6Z4-3;Q53GE1;B7Z7F3;Q308M8;B7Z5P4;K7EIJ4 RANBP3 Ran-binding protein 3 yes no 0 0 0 7.5 0.5 1 1 40.593 40.624 4 7.8852E-07 9723 20230619_1888_Aki_TMTPro18x_K_F8 115.91 90.478 54834 49268 57312 57535 55355 63670 61824 59498 75050 63629 60723 56556 69637 57300 61953 67769 67941 66968 50753 45163 57989 57520 57855 63826 62367 61186 75125 63908 63338 57786 70422 59655 63494 67874 64941 63619 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 212220000 5024 2698 4762 9411;9412 7632;7633 7633 2 9606 Homo sapiens 0.014728925722465647 DTHDQLSEPSEVR Unmodified 1511.6852 0.68521439 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0;Q96IE3 PLEC;PLEC1 Plectin yes no 0 0 0 1 0 1 34.141 34.141 3 1.8988000000000002E-57 7646 20230619_1880_Aki_TMTPro18x_K_F1 282.12 256 33928 7797.4 25144 31123 45238 35366 45277 44241 63199 45163 50959 54819 48325 45938 35457 54432 45836 50064 31164 7383.4 26604 29524 45334 35628 46155 44600 62817 45916 52743 54913 48839 48088 36964 54267 43785 47582 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76866000 5025 3921 4763 9413 7634 7634 1 9606 Homo sapiens -0.05016081151825347 DTHKPGEMPYVCQVCQYR Unmodified 2266.9922 0.99217757 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67 POGZ Pogo transposable element with ZNF domain yes no 0 0 1 8 0 1 44.387 44.406 4 3.073E-13 11276 20230619_1888_Aki_TMTPro18x_K_F8 147.92 129.62 73544 26365 65867 73208 63306 58200 67179 67119 79353 92398 85703 82946 97519 80603 69834 103170 82458 97625 67707 24609 67531 69803 66005 60147 67915 68646 80499 91716 88095 84573 97823 84432 72389 102900 78878 92728 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40428000 5026 4164 4764 9414 7635;7636 7636 2 9606 Homo sapiens -0.09063883647968396 DTIEEHR Unmodified 898.41446 0.41445926 401 P23381;A0A024R6K8;P23381-2 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 0 0 1 0 1 26.784 26.784 3 0.0023875 4813 20230619_1880_Aki_TMTPro18x_K_F1 113.89 55.311 4833.4 4531.8 6465.5 6217.4 9383.8 8576.3 8944.3 9380.3 8591 3954.4 9009.7 12601 7047.7 6358.5 10032 4129 9352.9 8875.7 4485.8 4160.5 6474.1 6172.3 9482 8512.5 9032.8 9383.5 8763.6 4549.2 9169.7 12174 7398.1 6643.8 10078 4471.2 8952 8381.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12011000 5027 401 4765 9415 7637 7637 1 9606 Homo sapiens -0.03881139555755908 DTILHDNLK Unmodified 1067.5611 0.56112349 526 A0A024R8M0;Q14344;Q14344-2;B4DWV9 GNA13 Guanine nucleotide-binding protein subunit alpha-13 yes no 0 0 0 4.5 0.5 1 1 44.062 44.123 3 0.00017867 11259 20230619_1885_Aki_TMTPro18x_K_F5 128.91 86.796 91287 76869 86578 89920 98507 98815 93748 94545 124000 100270 119690 110760 119410 96211 95329 115780 128500 116420 84390 70481 88521 89874 101230 99194 95745 97041 124350 101400 122890 111540 120730 100780 99298 116010 122540 110610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189170000 5028 526 4766 9416;9417 7638 7638 1 9606 Homo sapiens 0.03004537609331237 DTLENTIGHR Unmodified 1154.568 0.56799978 1457 H3BS70;Q96DC0;A0A384NKJ3;P42126-2;P42126 ECI1;DCI Enoyl-CoA delta isomerase 1, mitochondrial yes no 0 0 0 3.5 0.5 1 1 37.196 37.245 3 1.2362E-14 8468 20230619_1882_Aki_TMTPro18x_K_F3 237.93 190.73 26616 20861 19893 24587 29962 38000 36886 30759 116340 26976 30170 34251 28514 30569 31639 27765 34954 39709 24553 19134 20965 24689 30738 37225 39098 31832 110250 27918 34934 34299 29397 31492 32279 28629 33444 37572 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107710000 5029 1457 4767 9418;9419 7639 7639 1 9606 Homo sapiens -0.0031014951009638025 DTLESEMR Oxidation (M) 995.42298 0.42297503 3295 O75165 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 0 1 0 1 0 1 32.774 32.774 2 0.025431 7090 20230619_1880_Aki_TMTPro18x_K_F1 77.058 71.899 12447 9559.5 13336 15801 19140 21088 12699 20119 28442 15064 22027 23261 17393 14965 16783 20184 22967 21735 11512 8802.6 13572 15501 19282 20888 13676 20464 27773 15764 22696 22970 17881 15979 17437 20275 21907 20632 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9694000 5030 3295 4768 9420 7640 7640 1930 1 9606 Homo sapiens -0.0749195370143525 DTLFCYHK Unmodified 1082.4855 0.48551571 4491;3802 Q05CW7;Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 no no 0 0 0 8 0 1 47.486 47.545 3 0.0090868 12494 20230619_1888_Aki_TMTPro18x_K_F8 78.149 43.762 273580 225110 261470 269710 300350 361820 326850 323390 398570 288100 295490 290220 303090 265310 326760 320600 342780 311440 252890 206470 267320 269930 309970 357900 330110 332010 397550 293390 308420 293820 310350 277380 332680 320820 327590 296020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132050000 5031 3802;4491 4769 9421 7641 7641 1 9606 Homo sapiens -0.05242762842635784 DTLGLFLR Unmodified 933.52837 0.5283668 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 2 0 1 60.623 60.634 2 0.037561 18887 20230619_1881_Aki_TMTPro18x_K_F2 73.324 38.075 179340 163680 175840 199920 164510 208540 188740 204220 233960 193190 180790 181590 184320 170590 202010 204650 195240 206980 165920 150100 178920 199020 172710 210060 190330 208610 233580 195560 188220 184530 188960 178100 204750 205240 186950 196520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41454000 5032 3312 4770 9422 7642 7642 1 9606 Homo sapiens 0.05894375277136987 DTLQSELVGQLYK Unmodified 1492.7773 0.77732386 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;O00429-7;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402 DNM1L Dynamin-1-like protein no no 0 0 0 7 0 1 61.69 61.729 3 0.0079463 18552 20230619_1887_Aki_TMTPro18x_K_F7 67.275 48.064 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5033 3212;3213 4771 9423 7643 7643 1 9606 Homo sapiens 0.05064628932541382 DTLSIHYLMLPR Unmodified 1457.7701 0.77007041 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2;Q7L4K8 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 2 0 1 56.772 56.788 3 9.6353E-05 17287 20230619_1881_Aki_TMTPro18x_K_F2 108.35 89.105 13699 8482.1 14911 17789 12083 20750 15164 11334 19061 14475 11620 9966.9 12598 9768.8 12795 13972 12675 11682 12657 7846.2 15030 17208 12919 20507 15221 12331 18893 14348 12307 10321 12833 10312 13007 13842 12122 11123 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9239600 5034 1736 4772 9424 7644 7644 1 9606 Homo sapiens 0.05949617851069888 DTLVADNLDQATR Unmodified 1430.7001 0.70013617 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;B3KVJ5 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 2.5 0.5 1 1 48.166 48.241 2 4.9467E-21 13367 20230619_1882_Aki_TMTPro18x_K_F3 273.44 198.6 196820 148000 166370 179680 169120 187840 205010 188570 226070 222990 214260 211120 238350 195940 196770 246110 228620 215090 181670 135810 171680 178980 176500 189360 205230 193560 228700 223180 221400 214390 240500 205270 202850 244650 218340 204670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 165970000 5035 4593 4773 9425;9426 7645;7646 7646 2 9606 Homo sapiens 0.002014107161812717 DTLYEAVR Unmodified 965.48181 0.48181054 3732 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 3.5 0.5 1 1 44.463 44.522 2 0.00094971 11484 20230619_1883_Aki_TMTPro18x_K_F4 152.41 110.91 972970 756370 759700 893100 1016900 1185500 982230 1053000 1498400 992120 980210 838860 927620 750120 950710 1014800 971970 813210 897770 693790 794240 894390 1037000 1173400 1007800 1082700 1475100 1002500 1026800 856300 949530 790700 967830 1004100 928660 775110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1855299999.9999998 5036 3732 4774 9427;9428 7647;7648 7648 2 9606 Homo sapiens -0.0023110934480428114 DTMDAINVLSK Unmodified 1205.5962 0.59618837 2443 B3KY42;Q96PZ0;Q96PZ0-2;E7EUH7;A3R6R7;H0Y863 PUS7 Pseudouridylate synthase 7 homolog yes no 0 0 0 5.5 0.5 1 1 58.224 58.287 3 0.021337 17393 20230619_1886_Aki_TMTPro18x_K_F6 49.448 32.012 45767 36660 45043 45656 40531 57539 52775 45516 59583 51555 50235 61143 66732 55855 53132 72718 68951 63030 42308 33640 45775 45517 42891 56972 52693 47517 59936 52107 52773 61456 66956 58661 55245 72207 65778 59991 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51277000 5037 2443 4775 9429;9430 7649 7649 1 9606 Homo sapiens 0.0016141235496434092 DTNFGTNCICR Unmodified 1356.5551 0.55506861 3574 P41223;P41223-2;C9JCD9 BUD31 Protein BUD31 homolog yes no 0 0 0 6 0 1 42.101 42.195 2 1.0335999999999999E-22 10428 20230619_1886_Aki_TMTPro18x_K_F6 243.53 214.37 138950 102230 114220 125280 132280 168730 144170 130440 182780 144070 140800 138980 163990 116470 147260 171840 155720 159330 128210 93827 118460 125160 136600 166390 145780 136280 182280 144840 147440 140630 165700 123910 150640 171010 148930 151450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132080000 5038 3574 4776 9431 7650 7650 1 9606 Homo sapiens -0.10894671956134516 DTNGSQFFITTVK Unmodified 1456.7198 0.71980898 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 0 0 5.33 3.09 1 1 1 57.695 57.747 2;3 6.4285E-08 16847 20230619_1888_Aki_TMTPro18x_K_F8 130.2 111.74 81256 68545 83269 84126 87039 105520 95440 107330 120300 94533 103320 97621 116030 90306 122800 112760 103510 120310 75165 62878 84499 83977 90439 105080 96533 109120 120390 96361 107350 98794 118260 94639 123640 113410 99341 114130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 417730000 5039 1716 4777 9432;9433;9434 7651;7652 7652 2 9606 Homo sapiens 0.00971786726904611 DTNIDHGQPRPPSNR Unmodified 1702.8135 0.81354322 433 A0A024R784;O15164-2;O15164;B4DYZ9 TRIM24 Transcription intermediary factor 1-alpha yes no 0 0 1 4 0 1 23.187 23.253 4 3.7994E-10 3856 20230619_1883_Aki_TMTPro18x_K_F4 150.59 116.9 7023.2 5865.6 8461 8438.8 10681 11965 9276 11736 15282 8582.4 9914.1 9791.6 11085 11664 9650 10729 11772 8990.9 6506 5390.1 8508.8 8355.4 10891 11820 9621 11910 14994 8896.7 10472 9956.5 11229 11906 9959.7 10700 11223 8568.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26785000 5040 433 4778 9435 7653 7653 1 9606 Homo sapiens -0.009751011180469504 DTPDEPWAFPAR Unmodified 1400.6361 0.63607935 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 0 3 0.816 1 1 1 54.938 54.965 2 1.2566E-12 16303 20230619_1882_Aki_TMTPro18x_K_F3 200.56 174.05 218480 184800 212860 222930 196910 262720 234250 244530 303820 279190 269360 271120 320380 256010 253930 339920 315810 322080 202020 169490 216580 222540 207280 262120 236210 251930 304220 280160 280160 275210 322170 269090 263270 338970 301610 306080 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 180070000 5041 1229 4779 9436;9437;9438 7654;7655 7655 2 9606 Homo sapiens -0.04821324650106362 DTPENNPDTPFDFTPENYK Unmodified 2239.9546 0.95457253 2101 Q9UEH5;Q6IPW4;Q6IB76;A8K750;E7EPT4;P19404 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes no 0 0 0 3 1 1 1 60.381 60.383 3 7.0544E-15 18483 20230619_1883_Aki_TMTPro18x_K_F4 161.75 154.8 30108 33274 33674 43675 42407 46649 38965 42955 50070 36521 38406 34255 41674 36050 33496 38244 39572 44870 27928 30518 34102 43268 43271 46855 39831 43963 49885 37220 40058 34966 42053 37259 34568 38753 37840 42529 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55730000 5042 2101 4780 9439;9440 7656;7657 7657 2 9606 Homo sapiens -0.11580656836622438 DTPGFIVNR Unmodified 1017.5243 0.52434406 1026 Q16836-2;Q16836-3;Q16836;E9PF18;A0A0D9SFP2;B3KTT6;A0A140VK76;B2RB06;A0A0A0MSE2;A0A804HLB5;A0A1W2PNM1;A0A1W2PQ78;A0A804HKJ2;A0A1W2PQV5 HADH Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes no 0 0 0 6 0 1 45.605 45.691 2 0.00080564 11965 20230619_1886_Aki_TMTPro18x_K_F6 122.74 103.97 566000 449880 531250 561110 596500 672560 590680 658380 669680 606990 683200 695930 728780 639840 626340 691900 718240 770290 523000 412850 543710 559010 614540 671220 598630 671970 678200 618980 702350 700700 737650 664610 644140 698700 686680 730610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 792740000 5043 1026 4781 9441 7658 7658 1 9606 Homo sapiens 0.016282857834198694 DTPIPHQR Unmodified 962.49338 0.49337828 2151 D6RGW8;A8KAE3;O00238;O00238-2 BMPR1B Receptor protein serine/threonine kinase;Bone morphogenetic protein receptor type-1B yes no 0 0 0 4 0 1 29.058 29.128 3 0.00040553 5282 20230619_1883_Aki_TMTPro18x_K_F4 110.31 73.915 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5044 2151 4782 9442 7659 7659 1 9606 Homo sapiens 0.010631324691871669 DTPLSLACSGGR Unmodified 1232.5819 0.58193529 4207;3056 Q8IWZ3-6;Q8IWZ3-4;Q8IWZ3;E9PDP5;Q8TEF1;Q7Z586;H3BLS9;Q9NXF0;H7C2F5;B4DR08;H0YLQ3;H0YM23;O75179-6;O75179-7;O75179-2;O75179;B4DTP3;O75179-3 ANKHD1;FLJ00246;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 6 0 1 46.568 46.652 2 3.62E-09 12434 20230619_1886_Aki_TMTPro18x_K_F6 173.64 145.11 37058 31911 29791 34597 30187 34085 32620 35685 41918 43182 42505 41656 47784 36623 36234 53310 57296 56604 34222 29236 30900 34723 31430 34555 33048 36538 42222 43188 43791 42211 48050 38856 38304 53426 54612 53731 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40152000 5045 4207;3056 4783 9443 7660 7660 1 9606 Homo sapiens -0.025052400733329705 DTPQEMEQTR Unmodified 1233.5296 0.52956537 964 Q13617-2;Q13617;A0A0A0MTN0;A0A8I5QJI3;A0A8I5KYP8;A0A140VKB1;A0A8I5KUA9;A0A8I5KQQ5;Q5T2B5;A0A8I5KVR3 CUL2 Cullin-2 yes no 0 0 0 1 0 1 35.149 35.149 2 4.0001E-05 8031 20230619_1880_Aki_TMTPro18x_K_F1 150.1 112.38 29256 19797 27207 29575 35096 34181 34239 34074 44892 40324 39207 39090 45184 35438 33908 38324 45460 44315 27007 18216 27937 29114 35793 34213 34890 34977 44910 40393 40739 39603 45381 36857 35337 38789 43376 42031 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28559000 5046 964 4784 9444 7661 7661 1 9606 Homo sapiens -0.07785823206927489 DTPTSAGPNSFNK Unmodified 1334.6103 0.61025853 4283 Q8WW12;Q8WW12-3 PCNP PEST proteolytic signal-containing nuclear protein yes no 0 0 0 5.67 0.471 1 2 43.022 43.112 2;3 9.6929E-16 10823 20230619_1886_Aki_TMTPro18x_K_F6 215.08 172.97 101330 78756 105840 102180 102370 120740 107440 101280 144430 137540 143000 142470 148820 126040 123380 162380 176100 149600 93706 72308 107070 101500 106860 120220 109190 105800 144990 137270 146990 143880 150550 132460 129020 161770 167800 142320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 479060000 5047 4283 4785 9445;9446;9447 7662;7663 7663 2 9606 Homo sapiens -0.04366218892369034 DTQGFGEESR Unmodified 1124.4734 0.4734307 2671 E9PP42;E9PNA8;E9PLH2;M0QYU9;M0R0R3;M0R2G5;B7WNH4;Q9BQ49 SMIM7 Small integral membrane protein 7 yes no 0 0 0 1 0 1 35.284 35.284 2 0.00011205 8094 20230619_1880_Aki_TMTPro18x_K_F1 126.71 93.867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5048 2671 4786 9448 7664 7664 1 9606 Homo sapiens -0.08382708052090493 DTQLQQIVDK Unmodified 1186.6194 0.61936665 4201 Q86YQ0;F6U1T9;D3YTA9;H7BYZ3;P63098 HZGJ;PPP3R1 Calcineurin subunit B type 1 yes no 0 0 0 4.5 0.5 1 1 51.777 51.828 3 0.086168 14561 20230619_1885_Aki_TMTPro18x_K_F5 37.94 24.034 68700 63770 63966 71324 57267 75089 61877 67786 88290 84764 83379 85560 99877 84442 82964 116140 102360 118730 63543 58427 65322 71468 60296 75471 62971 70201 88277 84813 86496 86842 100630 88833 85921 116230 97860 112690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148080000 5049 4201 4787 9449;9450 7665 7665 1 9606 Homo sapiens 0.03352174463952906 DTQSGSLLFIGR Unmodified 1292.6725 0.67246486 346 P50454;A0A024R5K8;A8K259;B4DN87;E9PKH2;H0YEP8 SERPINH1 Serpin H1 yes no 0 0 0 7.5 0.5 1 1 55.306 55.368 2 1.2075E-07 15852 20230619_1888_Aki_TMTPro18x_K_F8 174.77 152.64 128340 104770 110510 129010 132760 148570 402850 409270 474160 169680 164240 223080 209120 169630 230310 240080 214520 240870 118530 96125 114510 128860 143360 154540 391990 393400 465350 186150 185600 222370 213120 180460 233010 240130 205580 228670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 525260000 5050 346 4788 9451;9452 7666;7667 7667 2 9606 Homo sapiens 0.03783552246613908 DTQTSITDSCAVYR Unmodified 1615.7148 0.71479996 4014 Q549N5;Q9Y5M8 SRPRB Signal recognition particle receptor subunit beta yes no 0 0 0 3.5 0.5 2 2 42.607 42.662 2;3 3.3956E-12 10766 20230619_1882_Aki_TMTPro18x_K_F3 226.73 209.5 128550 95111 115010 112500 130950 142410 141070 135960 171720 130230 139590 124920 138030 99778 131200 136170 142950 141570 118690 87261 118190 112610 135080 141600 142560 139170 171790 131830 144560 126280 140500 105780 134210 136530 136650 134420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 449580000 5051 4014 4789 9453;9454;9455;9456 7668;7669 7668 2 9606 Homo sapiens -0.06842885197966098 DTSASAVAVGLK Unmodified 1117.5979 0.59790293 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 6.5 0.5 2 2 48.784 48.866 2;3 1.3569E-12 13058 20230619_1887_Aki_TMTPro18x_K_F7 241.13 165.39 717630 607020 700720 766880 779290 897800 853460 785850 885630 912710 929790 894270 900240 767730 849260 939250 960410 867650 663580 556990 714920 762890 805420 895250 857130 814110 902440 915080 950420 904470 917390 805080 871080 936930 917190 825200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1532399999.9999998 5052 2908 4790 9457;9458;9459;9460 7670;7671;7672 7671 3 9606 Homo sapiens 0.04380789435231236 DTSATTALELVAGER Unmodified 1532.7682 0.76821573 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 3.5 0.5 1 1 58.197 58.214 3 3.5062E-11 17713 20230619_1882_Aki_TMTPro18x_K_F3 165.64 117.2 80811 63585 77225 83083 83573 94159 100450 93005 111320 125270 142070 164950 172160 157160 115150 174840 158310 219920 74678 58381 78895 82441 86778 94338 100630 95985 114080 126080 145720 165370 172130 163310 120830 177730 151480 208180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116280000 5053 128 4791 9461;9462 7673;7674 7673 2 9606 Homo sapiens 0.023142355761592626 DTSEDIEELVEPVAAHGPK Unmodified 2034.9746 0.9745797 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V641;A0A7I2V479 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 3 0.816 1 1 1 58.156 58.172 3 3.4583E-31 17923 20230619_1881_Aki_TMTPro18x_K_F2 227 217.72 83315 65680 70807 86901 69126 99343 98248 84203 95601 101500 108760 105780 112660 92272 98300 117020 108890 123280 76926 60312 73089 86132 72897 99092 97254 87578 98073 101780 111120 106770 114150 96965 100910 117480 104180 116980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 207780000 5054 832 4792 9463;9464;9465 7675;7676 7675 2 9606 Homo sapiens -0.001508611059989562 DTSENADGQSDENKDDYTIPDEYR Unmodified 2776.122 0.12198481 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;P43243-2;B4DRS1;B3KM87;Q5CZA7;B4DF66;Q9H4N1;Q68E03 MATR3;DKFZp686K23100;DKFZp686K0542;DKFZp686L22104 Matrin-3 yes no 0 0 1 1 0 1 47.095 47.095 4 2.0077999999999999E-19 13142 20230619_1880_Aki_TMTPro18x_K_F1 161.68 151.54 25405 20936 19659 25920 21349 28525 20956 19449 35932 35283 40094 50291 52478 48887 29394 66845 58972 75097 23449 19208 20514 25783 22119 28432 21613 20940 35932 35295 41513 50345 52132 51408 32141 67216 56250 71181 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21150000 5055 1059 4793 9466 7677 7677 1 9606 Homo sapiens -0.1950313061106499 DTSEYIIQAYK Unmodified 1329.6452 0.64524705 2127 A8K8X0;Q14CX7-2;Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes no 0 0 0 6 0 1 55.609 55.686 3 0.00033081 16335 20230619_1886_Aki_TMTPro18x_K_F6 80.706 62.438 68352 60678 59955 69551 59387 78421 65378 76919 85339 86598 85923 89743 91238 79937 79837 99359 95798 102560 63173 55614 61665 69632 62050 78569 66226 78904 85860 87091 88376 90635 92440 83804 82376 99653 91551 97351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47362000 5056 2127 4794 9467 7678 7678 1 9606 Homo sapiens -0.006389760844058401 DTSFSGLSLEEYK Unmodified 1474.6828 0.68275477 4421 Q9BRT2;V5IRT4;Q5TAQ0 UQCC2 Ubiquinol-cytochrome-c reductase complex assembly factor 2 yes no 0 0 0 5 0.707 1 2 1 59.871 59.91 2;3 1.2802E-07 17884 20230619_1885_Aki_TMTPro18x_K_F5 136.48 108.73 62950 59716 64467 67178 67340 80847 73299 74931 87052 79035 79437 84782 85369 75435 88985 84859 86331 95548 58278 54711 65433 67425 69940 80577 73992 77057 87598 79851 82181 85474 87130 78624 90255 85739 82691 90605 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 110590000 5057 4421 4795 9468;9469;9470;9471 7679;7680;7681 7680 3 9606 Homo sapiens -0.03559929609446044 DTSISCYK Unmodified 972.42225 0.42224675 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 5.5 0.5 1 1 43.894 43.979 2 2.1208E-06 11203 20230619_1886_Aki_TMTPro18x_K_F6 155.75 81.627 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5058 385 4796 9472;9473 7682;7683 7683 2 9606 Homo sapiens -0.06506748350500402 DTSLYRPALEELR Unmodified 1561.81 0.81002097 3840 Q59EG8;Q13200;B4DM22;Q9NSM5;H7C2Q3;C9JPC0 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 1 5.5 0.5 1 1 49.751 49.828 3 3.0714E-11 13664 20230619_1885_Aki_TMTPro18x_K_F5 188.09 152.86 201360 153690 176050 222260 182060 229710 225940 208620 292890 247540 238030 241280 258200 217210 211720 284300 240440 263790 185920 141290 181370 218770 190200 231100 227210 215710 292300 248040 247650 244450 260700 228400 218110 283250 229930 250680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118480000 5059 3840 4797 9474;9475 7684;7685 7684 2 9606 Homo sapiens 0.051588360553751045 DTSLYRPALEELRR Unmodified 1717.9111 0.911132 3840 Q59EG8;Q13200;B4DM22;Q9NSM5;H7C2Q3;C9JPC0 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 2 7.67 0.471 1 2 45.809 45.864 3;4 9.3426E-05 11727 20230619_1887_Aki_TMTPro18x_K_F7 98.439 77.776 82193 68455 76623 87595 83758 107680 92366 92940 127480 92586 93289 90872 99060 78632 93490 101440 99868 98279 75968 62825 78497 87122 86862 106970 93682 95947 126420 93627 97557 91947 100640 82747 95560 101370 95480 93386 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 752030000 5060 3840 4798 9476;9477;9478 7686;7687 7686 2 9606 Homo sapiens 0.08089287758070896 DTSNDPGQLLR Unmodified 1214.5891 0.58912916 4328 Q96BN8 OTULIN Ubiquitin thioesterase otulin yes yes 0 0 0 3 0 1 43.584 43.654 2 6.9037E-07 11204 20230619_1882_Aki_TMTPro18x_K_F3 164.66 132.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5061 4328 4799 9479 7688 7688 1 9606 Homo sapiens -0.009581842012266861 DTSPVFQR Unmodified 948.46649 0.46649483 4594 Q9NU22;Q6ZVV6 MDN1 Midasin yes no 0 0 0 4.5 0.5 1 1 38.983 39.05 2 0.0019869 9133 20230619_1885_Aki_TMTPro18x_K_F5 133.9 94.255 38306 31091 34894 39155 43575 46215 38448 39252 43833 46138 44614 48403 51934 40434 53326 46602 54162 47670 35393 28532 35881 38961 44437 46043 39239 40764 44424 46327 46099 48741 52812 42316 54204 46818 51769 45290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70794000 5062 4594 4800 9480;9481 7689 7689 1 9606 Homo sapiens -0.009799761419913011 DTSSSTVVSTQR Unmodified 1266.6052 0.60517315 2994 F8W8I6;Q59G98;P31483;P31483-3;E5RGV5 TIA1 Nucleolysin TIA-1 isoform p40 yes no 0 0 0 4 0 1 32.194 32.255 2 9.5303E-05 6444 20230619_1883_Aki_TMTPro18x_K_F4 120.77 103.54 8058 4818.1 10528 6657.8 17593 16956 11018 15241 12240 6246.8 13008 14683 13230 10053 11762 4977.4 13791 11641 7457.4 4432 10568 6712.7 17514 16323 11542 15426 12409 7055.6 13331 14359 13417 10262 12058 5481.1 13161 10994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9329300 5063 2994 4801 9482 7690 7690 1 9606 Homo sapiens -0.017465227550019335 DTSVEGSEMVPGK Oxidation (M) 1350.5973 0.59731058 1074 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;P18754-2;C9JW69;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4 RCC1 Regulator of chromosome condensation yes no 0 1 0 2.5 0.5 1 1 42.332 42.404 3 1.4044E-06 10639 20230619_1882_Aki_TMTPro18x_K_F3 138.75 115.84 36588 28150 35393 35740 37394 46688 39338 39573 56641 45857 46963 56389 53802 48907 47685 55910 64077 68252 33810 25840 36092 35609 38813 46200 40080 41084 56315 46362 48997 56488 54451 51066 49546 56735 61179 64680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81842000 5064 1074 4802 9483;9484 7691 7691 636 1 9606 Homo sapiens -0.06396418066788101 DTSVEGSEMVPGK Unmodified 1334.6024 0.60239596 1074 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;P18754-2;C9JW69;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4 RCC1 Regulator of chromosome condensation yes no 0 0 0 3 0 1 46.651 46.73 3 0.0015367 12644 20230619_1882_Aki_TMTPro18x_K_F3 85.845 70.969 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5065 1074 4802 9485 7692 7692 1 9606 Homo sapiens -0.051521142041565327 DTTINEIEDTFR Unmodified 1452.6733 0.67325272 1935 A4D1K0;Q16864;Q16864-2 ATP6V1F V-type proton ATPase subunit F yes no 0 0 0 1 0 1 60.279 60.279 2 3.0111E-05 18607 20230619_1880_Aki_TMTPro18x_K_F1 136.96 70.199 47913 39730 48576 55774 44015 57258 52820 51892 59860 62412 62909 60565 67571 52635 56964 67042 58656 68227 44313 36500 49277 55001 46387 57630 52978 53677 60726 62455 64581 61311 68271 55348 58265 67174 56171 64755 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31443000 5066 1935 4803 9486 7693 7693 1 9606 Homo sapiens -0.03497697894999874 DTTLNWK Unmodified 876.43413 0.43413207 3498 Q6FGU2;P23919;Q53F55;P23919-2;H7C312;H7BZ20 DTYMK Thymidylate kinase yes no 0 0 0 6.5 0.5 1 1 49.794 49.875 2 0.0042578 13497 20230619_1887_Aki_TMTPro18x_K_F7 149.48 93.767 407900 353080 396910 369340 399490 483420 457430 440190 547560 475990 474980 446610 499940 394480 434410 419840 524900 429690 377220 323380 404070 373400 416770 479220 460580 453550 549690 478440 491600 452880 506220 410190 447740 422170 500680 408360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 209930000 5067 3498 4804 9487;9488 7694 7694 1 9606 Homo sapiens -0.009027635450024718 DTTVGTLSQR Unmodified 1076.5462 0.54620171 2310 B2RD27;P51665;B4DXI8 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes no 0 0 0 4.5 0.5 1 1 37.177 37.245 2 8.4835E-08 8377 20230619_1885_Aki_TMTPro18x_K_F5 193.1 119.44 226340 166010 180170 215920 259390 281960 242210 239430 331740 260760 276290 273150 289170 239770 238630 275630 327470 280160 208810 152460 188280 214710 262940 279110 247850 248070 330520 262980 286540 275620 292390 250360 248620 276570 312140 266220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 328240000 5068 2310 4805 9489;9490 7695;7696 7696 2 9606 Homo sapiens 0.010990457413299737 DTVATQLSEAVDATR Unmodified 1575.774 0.77402939 1189 A0A140VJN8;O60664-4;O60664-3;O60664;K7EL96;K7ERZ3 PLIN3 Perilipin-3 yes no 0 0 0 4 0.707 1 2 1 55.46 55.499 2;3 4.0042E-14 16573 20230619_1882_Aki_TMTPro18x_K_F3 180.85 156.6 26138 28885 33924 30135 30179 41398 33505 39511 43145 30746 29104 31885 29893 31896 27637 36196 33609 35712 24282 26434 33745 30503 31790 40949 33905 40230 42816 31603 30575 32327 30437 33099 28521 36255 32114 33917 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 371320000 5069 1189 4806 9491;9492;9493;9494 7697;7698 7697 2 9606 Homo sapiens 0.00917334087830568 DTVDPVQDEMLAR Oxidation (M) 1503.6875 0.68752257 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5;Q9BWF4 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 1 0 1 0 1 45.166 45.166 2 0.00023548 12356 20230619_1880_Aki_TMTPro18x_K_F1 104.07 84.08 85548 69370 74053 83665 81877 80221 81995 77697 84633 103650 104490 94008 101170 84854 85639 110220 91970 96772 79011 63633 76338 83275 84370 81373 82773 80267 86959 103030 106040 95602 102600 89168 87849 109530 87968 92040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227440000 5070 2702 4807 9495 7699 7699 1621 1 9606 Homo sapiens -0.04417368738359073 DTVDPVQDEMLAR Unmodified 1487.6926 0.69260795 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5;Q9BWF4 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 1.5 0.5 1 1 50.484 50.51 2 9.4834E-22 14535 20230619_1880_Aki_TMTPro18x_K_F1 283.63 240.33 173620 141860 157500 153770 127710 156320 151890 153310 180720 189320 174680 163190 203920 155910 156380 198600 179280 170410 160420 130000 160870 154440 135870 157840 152720 157780 182350 188610 180660 166650 204820 163390 161350 197190 171250 162180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 232130000 5071 2702 4807 9496;9497 7700;7701 7700 2 9606 Homo sapiens -0.03173064875727505 DTVILPIK Unmodified 897.55352 0.55351892 1687 A0A7P0T7Z9;A0A7P0T9B4;A0A7P0TAM5;A0A7P0T9U2;Q8NBU5-2;Q8NBU5;A0A7P0Z4J1;B4E2J1 ATAD1 ATPase family AAA domain-containing protein 1 yes no 0 0 0 8 0 1 56.552 56.609 2 0.010797 16405 20230619_1888_Aki_TMTPro18x_K_F8 92.925 47.295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5072 1687 4808 9498 7702 7702 1 9606 Homo sapiens 0.10064430079717113 DTVPLPPGGAR Unmodified 1078.5771 0.57710791 1445 Q6IB91;A0A384MTT2;Q16822;H0YM31;Q16822-2 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 5 0 1 43.172 43.252 2 0.067671 10882 20230619_1885_Aki_TMTPro18x_K_F5 57.96 32.788 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5073 1445 4809 9499 7703 7703 1 9606 Homo sapiens 0.04096243846242942 DTVSEDTIR Unmodified 1034.488 0.48801813 493 A0A024R850;Q96E11-8;Q96E11-3;Q96E11 MRRF Ribosome-recycling factor, mitochondrial yes no 0 0 0 1 0 1 36.76 36.76 2 0.0083297 8720 20230619_1880_Aki_TMTPro18x_K_F1 88.177 50.044 14151 11906 14172 13655 15750 19888 13342 17114 17246 18267 24374 20486 24941 20643 17444 20292 26596 21748 13088 10915 14415 13731 16198 19568 13734 17689 17632 18469 24657 20720 25080 21274 18387 20474 25325 20659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38891000 5074 493 4810 9500 7704 7704 1 9606 Homo sapiens -0.027846359039585877 DTVTISGPQAPVFEFVEQLR Unmodified 2232.1426 0.14264808 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 6.5 0.5 1 1 65.245 65.281 3 3.6510000000000003E-45 20182 20230619_1887_Aki_TMTPro18x_K_F7 257.56 240.54 110510 71500 88381 108220 64462 75270 87171 90830 92469 124210 142110 127470 120990 112840 112160 170930 124870 129860 101880 65814 91374 105800 69546 78939 86833 92657 95935 123760 142430 128910 123790 119830 115250 168360 119390 123760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290980000 5075 3606 4811 9501;9502 7705 7705 1 9606 Homo sapiens 0.07586245878474074 DTWHQVYR Unmodified 1103.5148 0.514842 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YFD1;Q6PEK6;H7C141 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 6.5 0.5 1 1 36.821 36.889 3 1.5705E-05 8285 20230619_1886_Aki_TMTPro18x_K_F6 167.9 133.09 77670 64378 79945 80344 106540 107290 114120 105370 138310 94996 105900 113410 104800 91012 111350 96974 115610 106670 71843 59069 81436 80191 108700 106420 115290 107500 138090 97202 110210 113510 107340 94927 113260 97958 110510 101250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 124050000 5076 2865 4812 9503;9504 7706;7707 7706 2 9606 Homo sapiens -0.03277482502107887 DTYFLSSEECITAGDFQNK Unmodified 2223.963 0.96302873 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;B4DG89 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 0 4.5 0.5 1 1 61.705 61.731 3 0.0038645 18639 20230619_1885_Aki_TMTPro18x_K_F5 67.418 59.425 60799 54835 54196 64200 59248 77105 68303 66240 80881 68355 65476 69242 78914 65204 72301 81531 77279 84440 56205 50267 55761 64222 61507 76716 68709 68483 81059 69038 68526 70130 79799 68274 73964 81801 73941 80144 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171030000 5077 534 4813 9505;9506 7708;7709 7709 2 9606 Homo sapiens -0.09999426191598104 DTYGVRPLFK Unmodified 1194.6397 0.63970816 3409 P08243-2;P08243;P08243-3;B4DY32;F8WEJ5;C9J057;C9JT45 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 1 3 0 2 49.248 49.326 3 0.013387 13836 20230619_1882_Aki_TMTPro18x_K_F3 73.781 51.695 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5078 3409 4814 9507;9508 7710;7711 7711 2 9606 Homo sapiens 0.05017389914382875 DTYIENEK Unmodified 1010.4557 0.45565537 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 2.5 0.5 1 1 42.405 42.477 2 5.8001E-05 10952 20230619_1881_Aki_TMTPro18x_K_F2 186.33 137.58 133240 79200 160110 190250 242310 264310 192120 234580 293390 164120 273820 309250 234550 221280 235820 106830 294390 271090 123200 73458 161830 183690 243940 260710 199790 239730 291780 174260 280350 304040 240870 225150 242250 118850 280940 255830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147460000 5079 3384 4815 9509;9510 7712 7712 1 9606 Homo sapiens -0.04915423306943012 DTYLLYEGR Unmodified 1128.5451 0.54513908 1732 Q8N9Q7;A0A804HJB7;Q9BSH4 CCDC44;TACO1 Translational activator of cytochrome c oxidase 1 yes no 0 0 0 3 0 1 50.322 50.397 2 0.050687 14297 20230619_1882_Aki_TMTPro18x_K_F3 61.56 43.248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5080 1732 4816 9511 7713 7713 1 9606 Homo sapiens -0.013991686275630855 DVAAHFLAR Unmodified 998.52976 0.52976379 1491 B4DG74;B7ZB23;B7Z801;C9JRT8;A0A8V8TNW3;B3KWA8;B7Z2C7;A0A384P5Q5;A0A8V8TP58;O95622-2;O43306-2;O43306;O95622 ADCY5;ADCY6 Adenylate cyclase type 5;Adenylate cyclase type 6 yes no 0 0 0 8 0 1 43.61 43.62 3 0.0015699 10936 20230619_1888_Aki_TMTPro18x_K_F8 96.331 72.176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5081 1491 4817 9512 7714 7714 1 9606 Homo sapiens 0.030440093659080958 DVACGANHTLVLDSQK Unmodified 1726.8308 0.83083277 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 5 0.816 1 1 1 44.709 44.78 3 4.5042E-11 11522 20230619_1885_Aki_TMTPro18x_K_F5 152.71 93.102 463760 309120 378520 409360 387840 448440 419060 437920 507470 535840 532130 554120 628900 511940 444520 736890 688700 725780 427680 284060 391930 405640 403470 450160 423580 450650 513290 536830 548960 560610 630150 541480 470370 735280 656840 689330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1347400000 5082 617 4818 9513;9514;9515 7715;7716;7717 7716 3 9606 Homo sapiens -0.0035094162728910305 DVACGANHTLVLDSQKR Unmodified 1882.9319 0.93194379 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 1 7.5 0.5 1 1 40.595 40.625 4 6.8191E-30 9468 20230619_1887_Aki_TMTPro18x_K_F7 225.69 193.07 149840 169500 172520 157250 187510 171430 169290 170840 166640 164180 188770 141390 176540 132990 201440 138830 146590 133310 139060 154960 173440 160190 192710 172490 171780 174370 170820 165580 191860 144430 181530 137870 201020 139340 140690 126730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1183800000 5083 617 4819 9516;9517 7718 7718 1 9606 Homo sapiens 0.02579510075406688 DVAEAKPELSLLGDGDH Unmodified 1764.853 0.853008 1185 A0A140VJL6;Q2TAA2;H7C5G1;Q6NVV8;Q05D21;Q2TAA2-2 IAH1 Isoamyl acetate-hydrolyzing esterase 1 homolog yes no 0 0 1 5 0 1 55.787 55.852 3 0.0024256 16190 20230619_1885_Aki_TMTPro18x_K_F5 68.413 60.098 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5084 1185 4820 9518 7719 7719 1 9606 Homo sapiens 0.001175613221448657 DVAENAGLFIDFVQR Unmodified 1692.8471 0.84713476 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67;Q7Z3K3-3;B4DSK8 POGZ Pogo transposable element with ZNF domain yes no 0 0 0 6 0 1 63.702 63.748 3 0.0046968 19799 20230619_1886_Aki_TMTPro18x_K_F6 66.809 42.619 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5085 4164 4821 9519 7720 7720 1 9606 Homo sapiens 0.028425076011217243 DVAEVDTVRR Unmodified 1158.5993 0.59929991 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0 PLEC;PLEC1 Plectin yes no 0 0 1 2.5 0.5 1 1 35.048 35.107 3 8.1884E-10 7705 20230619_1881_Aki_TMTPro18x_K_F2 196.06 151.3 36118 25653 32386 34852 51575 50022 51936 53371 76625 49154 50371 47533 55627 46268 46770 59013 61050 54383 33341 23574 33516 34638 52058 49510 53056 54144 75539 49915 53113 48326 56209 48444 48567 58803 58228 51727 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54677000 5086 3921 4822 9520;9521 7721 7721 1 9606 Homo sapiens 0.0263442352400034 DVAHLGPDPQPPYSR Unmodified 1647.8005 0.80051892 1284 A0A1C7CYX9;Q59GB4;A9CQZ4 DPYSL2 yes no 0 0 0 4.5 0.5 1 1 43.157 43.219 3 2.036E-05 10869 20230619_1883_Aki_TMTPro18x_K_F4 104.86 89.654 104190 84171 111140 113570 120240 130050 128330 131770 148490 119690 146140 152260 138230 137350 147070 125430 155640 151550 96387 77301 112480 112490 124370 130270 129570 134170 149910 122650 149780 152560 141890 141470 149740 127800 148800 143680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 205990000 5087 1284 4823 9522;9523 7722;7723 7722 2 9606 Homo sapiens 0.0025306776985871693 DVAIEIEER Unmodified 1072.5401 0.5400537 138 H7C441;C9JXG5;F8WCP5;A0A024R1D6;Q13769;C9JXU6;F5GZF3;C9JCL9 THOC5;hCG_2011153 THO complex subunit 5 homolog yes no 0 0 0 1 0 1 47.581 47.581 2 0.0088973 13375 20230619_1880_Aki_TMTPro18x_K_F1 87.149 57.482 33139 31845 31298 33121 31624 26614 35793 37278 43137 38707 40595 46383 41046 34735 43202 43598 48915 48452 30662 29155 31954 33290 32880 27691 36079 37389 43418 39262 41839 46327 41989 36685 44209 43939 46743 45971 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16195000 5088 138 4824 9524 7724 7724 1 9606 Homo sapiens 0.006685275098107013 DVAIKEPLVDVVDPK Unmodified 1635.9083 0.90833803 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3S6H7G3;A0A3Q8ATF5;Q5U8W9;A0A3Q8APW9;A0A3Q8B022;A0A3Q8APX7;A0A3S6H7Z6;A0A3Q8AIR8;A0A3S6H7Y4;A0A3Q8B027;B4DJ87;E9PIX6;A0A3S6H765;A0A3Q8BCJ2;A0A3S6H8A6;A0A3Q8BCI7;E9PQ98;A0A3S6H824;A0A3S6H950;A0A3S6H942;A0A3S6H7K8;A0A3Q8AIS2;A0A3Q8APY3;A0A3S6H960;A0A3Q8B4M4;A0A3Q8AIS5;A0A3Q8B9M1;A0A3S6H8W3;A0A3S6H7E4;A0A3S6H7Y8 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 yes no 0 0 1 5.5 1.12 1 1 1 1 58.33 58.375 3 3.3921E-05 17432 20230619_1886_Aki_TMTPro18x_K_F6 101.05 77.819 629450 523680 543280 604730 589530 662030 648740 634180 649300 821970 827770 716960 774850 606530 754460 697540 631880 597070 581430 480120 560150 604890 610450 664590 650860 654760 669290 817060 837890 728840 790800 634300 760470 694240 605520 568290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 521290000 5089 1536 4825 9525;9526;9527;9528 7725;7726;7727 7727 3 9606 Homo sapiens 0.11582019580532688 DVAPQAPVHFLVIPK Unmodified 1629.9243 0.92426287 4004 Q8WYJ5;Q53HJ8;Q9BX68 HINT2 Histidine triad nucleotide-binding protein 2, mitochondrial yes no 0 0 0 2 0 1 58.091 58.106 4 1.0197E-13 17877 20230619_1881_Aki_TMTPro18x_K_F2 136.39 109.43 32987 28695 34231 44282 31088 35641 42730 42423 44036 41889 43567 47364 41211 35992 47751 44750 47418 56254 30524 26387 34692 43301 32848 36831 42449 42879 44755 42513 44666 47437 42454 37977 48409 45477 45433 53276 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18749000 5090 4004 4826 9529 7728 7728 1 9606 Homo sapiens 0.1344977060812198 DVASTAGEEGDTSLR Unmodified 1506.6798 0.67979466 237 A0A024R3D4;Q8ND24;E9PRE9 DKFZp547C195;RNF214 RING finger protein 214 yes no 0 0 0 1 0 1 40.017 40.017 2 4.2263999999999997E-91 10079 20230619_1880_Aki_TMTPro18x_K_F1 382.31 364.08 43907 33605 36453 41576 41147 46308 45198 44258 52584 51567 61853 54984 56588 45112 49568 63275 61888 56077 40526 30841 37755 41390 42510 46420 45567 45554 53500 51828 62735 55380 57574 47819 51283 62850 59055 53360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58598000 5091 237 4827 9530 7729 7729 1 9606 Homo sapiens -0.05327804734270103 DVAVEEFPRK Unmodified 1188.6139 0.61388734 553 Q6MZT2;A0A024R906;Q16832 DKFZp686D1354;DDR2 Discoidin domain-containing receptor 2 yes no 0 0 1 4 0 1 45.028 45.072 3 0.021109 11777 20230619_1883_Aki_TMTPro18x_K_F4 63.32 43.033 73046 64240 75173 66297 75980 71471 74215 60980 98521 68683 66267 66004 69751 57320 75788 70938 63723 75976 67591 58826 76122 66905 78746 71715 75652 63278 97638 69004 69679 66832 71351 60159 76273 71365 61171 72064 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55106000 5092 553 4828 9531 7730 7730 1 9606 Homo sapiens 0.02712495672130899 DVAVMQLR Oxidation (M) 946.4906 0.49060109 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITV3;A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 1 0 4.5 0.5 1 1 40.057 40.123 2 0.07869 9608 20230619_1885_Aki_TMTPro18x_K_F5 63.48 38.557 61074 49252 57866 64337 70932 73070 66097 71749 100520 75233 73138 63624 68294 56771 69577 75494 78448 68563 56444 45217 59276 63838 72547 73202 67974 73452 99298 75551 76046 64926 69933 59786 71247 75161 74905 65231 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123270000 5093 3647 4829 9532;9533 7731 7731 2334 1 9606 Homo sapiens 0.015215410200198676 DVAVMQLR Unmodified 930.49569 0.49568646 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITV3;A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 6.5 0.5 1 1 47.533 47.617 2 0.005101 12874 20230619_1886_Aki_TMTPro18x_K_F6 128.37 81.8 235670 207360 240260 218560 239420 298380 254680 259820 341430 222100 219450 207480 232580 177810 239360 257390 251420 219520 218060 189920 243580 220980 249570 294760 258550 267000 337720 226310 231430 210470 237230 188650 244030 255210 240220 209020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159690000 5094 3647 4829 9534;9535 7732;7733 7732 2 9606 Homo sapiens 0.027658448826286985 DVAWAPSIGLPTSTIASCSQDGR Unmodified 2388.138 0.1379734 3660 P55735-2;P55735;P55735-4;P55735-3;A8MXL6;Q59FA6 SEC13 Protein SEC13 homolog yes no 0 0 0 7.5 0.5 1 1 62.159 62.192 3 2.2654E-19 18796 20230619_1887_Aki_TMTPro18x_K_F7 154.56 144.87 49788 46939 46129 47634 44981 50898 55776 49434 54094 59228 64181 69694 65798 56606 59437 72838 66695 70543 46054 42967 47163 48122 47102 51213 55559 50890 55622 59635 65487 69831 66805 59664 61029 72768 63770 67012 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 621620000 5095 3660 4830 9536;9537 7734 7734 1 9606 Homo sapiens -0.0005700632655134541 DVAYQYVK Unmodified 984.49165 0.49164694 1034 A0A0G2JLD8;E7EUY5;Q567R6;A4D1U3;B7Z268;Q04837;C9K0U8 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial yes no 0 0 0 6.5 0.5 1 1 47.997 48.08 2 0.0024859 12734 20230619_1887_Aki_TMTPro18x_K_F7 125.96 93.741 51236 37559 42546 40679 47578 185080 47758 37761 357560 63487 52606 78394 65929 70269 51450 107460 102450 93750 47279 34432 44173 42557 50826 172440 57296 49382 333520 64174 68899 78611 66522 74615 55694 106440 97474 89222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 242170000 5096 1034 4831 9538;9539 7735 7735 1 9606 Homo sapiens -0.0012192133942789951 DVCLYPR Unmodified 921.43784 0.43783723 3265 O43776;B4DN60 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 0 6 0.816 1 1 1 44.498 44.582 2 0.026211 11456 20230619_1885_Aki_TMTPro18x_K_F5 96.964 60.769 535340 425190 507600 552770 493760 567370 586280 553650 624910 831020 855360 940690 994650 820290 745510 985440 1023900 1101800 494710 390360 518060 547890 516640 572280 587140 574130 644570 827960 873170 945630 998850 859120 779160 993360 977490 1045000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 671290000 5097 3265 4832 9540;9541;9542 7736;7737 7736 2 9606 Homo sapiens -0.02602417042783145 DVCTELLPLIKPQGR Unmodified 1737.9447 0.94474031 1468 A0A384NL53;P16152 CBR1 Carbonyl reductase [NADPH] 1 yes no 0 0 1 2 0 1 59.849 59.861 3 2.0859E-14 18619 20230619_1881_Aki_TMTPro18x_K_F2 189.13 175.17 638440 578530 631510 574690 611390 662370 663790 651760 622050 750040 738310 652090 699910 575020 762360 685650 670350 529590 590690 529550 641400 582420 637720 663300 665300 669060 641350 749430 750060 663940 718160 601470 768570 678930 641300 505180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 560840000 5098 1468 4833 9543 7738 7738 1 9606 Homo sapiens 0.10528573205601788 DVCTFLR Unmodified 909.43784 0.43783723 3411 Q8TBT6;P08574 CYC1 Cytochrome c1, heme protein, mitochondrial yes no 0 0 0 7 0.816 1 1 1 49.809 49.887 2 0.0044676 13513 20230619_1887_Aki_TMTPro18x_K_F7 148.07 59.334 742250 681100 670470 647300 618970 683570 768650 816290 825070 530710 460830 500250 617530 490210 836820 617350 631350 573410 686310 623200 686190 657790 651140 691880 768060 816910 822160 551050 497840 509210 635490 512870 834460 616620 605660 545300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 556820000 5099 3411 4834 9544;9545;9546 7739;7740 7739 2 9606 Homo sapiens -0.020504170427898316 DVDDATLSR Unmodified 990.4618 0.46180338 2433 B3KWQ6;P41219;P41219-2;F8W835 PRPH Peripherin yes no 0 0 0 1.5 0.5 1 1 38.042 38.073 2 4.5076E-08 9217 20230619_1880_Aki_TMTPro18x_K_F1 200.88 152.09 1071100 638860 902390 1017300 945460 1008400 853580 940460 1371600 1151200 1585900 1712900 1435900 1406600 1444000 954260 1886000 1729300 987480 588660 931770 995480 977460 1018500 882600 971450 1375100 1169800 1611200 1701400 1472100 1437100 1489700 1011400 1799200 1634800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2800400000 5100 2433 4835 9547;9548 7741 7741 1 9606 Homo sapiens -0.033809050754143755 DVDDFFEHER Unmodified 1307.5418 0.54184461 2117 A8K885;Q9UNH7;A0A0A0MRI2;B4DJS7;Q9UNH7-2;Q5QTQ6;G3V5X9 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 1 0 1 49.466 49.466 3 4.131E-14 14104 20230619_1880_Aki_TMTPro18x_K_F1 226.2 209.57 84387 67535 68274 79569 67911 75021 80612 73974 92744 83771 87513 88353 94725 78438 87211 104600 91814 110980 77896 61939 70759 79312 70961 76201 80902 75951 93567 84299 90360 89189 96082 82645 89173 104990 87935 105270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152970000 5101 2117 4836 9549 7742 7742 1 9606 Homo sapiens -0.09962463472243144 DVDETGITVASLER Unmodified 1503.7417 0.74166663 2690 B7Z592;Q8WU90;H7C466 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes no 0 0 0 1.5 0.5 1 1 53.526 53.54 2 1.3774999999999999E-36 15970 20230619_1881_Aki_TMTPro18x_K_F2 278.51 241.16 235490 205110 224740 249670 190330 200970 220690 217340 221820 276170 246660 210330 278310 213770 210650 294960 248910 258680 217760 188110 228790 247870 201150 207380 220930 222550 227240 273840 252990 216800 279680 224830 217980 292810 237850 246040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 232450000 5102 2690 4837 9550;9551 7743;7744 7744 2 9606 Homo sapiens 0.00994546684864872 DVDETISWIK Unmodified 1204.5976 0.59756858 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4.5 0.5 1 1 61.307 61.334 3 0.00012467 18878 20230619_1883_Aki_TMTPro18x_K_F4 125.48 70.872 285130 235350 258290 303550 251430 353670 298420 318920 396970 319140 342330 351050 342940 294560 357960 406440 341860 412310 263460 216020 264890 301500 263800 352780 301220 328170 396370 323670 353940 353200 350730 311600 363150 406790 327730 391290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102540000 5103 1022;3868 4838 9552;9553 7745;7746 7745 2 9606 Homo sapiens 0.003453697153872781 DVDEYERR Unmodified 1080.4836 0.48360145 4398 Q96T58 SPEN Msx2-interacting protein yes yes 0 0 1 1 0 1 32.432 32.432 3 0.013624 6971 20230619_1880_Aki_TMTPro18x_K_F1 72.23 48.275 17220 12603 22161 22536 26881 23651 22246 29251 30199 25759 29122 28424 30218 27205 29145 27272 39127 33232 15950 11620 22164 21951 27376 23957 22967 29379 30265 26302 29973 28700 30778 28109 30191 27746 37299 31522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9781000 5104 4398 4839 9554 7747 7747 1 9606 Homo sapiens -0.0534210032685678 DVDFELIK Unmodified 977.50696 0.50696266 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 2.8 0.748 2 2 1 59.916 59.933 2;3 0.0015162 18278 20230619_1883_Aki_TMTPro18x_K_F4 141.39 37.471 492200 395830 415610 478400 449780 503140 470400 471350 555600 571510 534400 538130 608990 502480 524580 619510 529990 595490 454490 363110 429440 476640 465400 506230 475780 486430 560720 571250 552550 546620 615020 525780 535770 619060 507500 565610 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1375100000 5105 2633 4840 9555;9556;9557;9558;9559 7748;7749;7750 7750 3 9606 Homo sapiens 0.017309454577684846 DVDGATLAR Unmodified 916.46141 0.46140945 3949 Q16352;Q59EM6 INA Alpha-internexin yes no 0 0 0 2 0.816 1 1 1 38.084 38.123 2 6.7693E-06 9004 20230619_1881_Aki_TMTPro18x_K_F2 180.34 119.66 441970 321030 414990 317210 100620 117750 163060 154840 168530 358360 457660 455040 407900 329560 362160 369530 557750 480620 408180 294090 418260 318600 131240 135440 161860 161510 183300 353720 453660 453090 415650 346390 379850 376890 531230 455600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 353810000 5106 3949 4841 9560;9561;9562 7751;7752 7751 2 9606 Homo sapiens -0.00016280004626878508 DVDGFHVINVGR Unmodified 1326.668 0.66804818 1651 A0A7I2V2U6;B2R7W0;P13995;P13995-2;B8ZZU9;A0A7I2YQD4;A0A7I2V482 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes no 0 0 0 5.5 0.5 1 1 48.855 48.932 3 9.7008E-06 13479 20230619_1886_Aki_TMTPro18x_K_F6 142.71 113.98 152930 130300 131270 143640 133010 153530 169000 151270 198610 129610 132870 153620 147810 113440 147850 168820 158730 165930 141280 119400 135280 144140 139120 154470 169120 154200 197800 132990 140250 153520 150350 121300 151060 168520 151820 157600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 762480000 5107 1651 4842 9563;9564 7753;7754 7754 2 9606 Homo sapiens 0.017780878236862918 DVDGLDR Unmodified 788.36645 0.36644643 1411 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;P35221-3;B3KSR8 CTNNA1 Catenin alpha-1 yes no 0 0 0 1 0 1 37.289 37.289 2 0.005588 8914 20230619_1880_Aki_TMTPro18x_K_F1 139.68 84.893 91354 51432 97815 89997 146900 136760 117270 131820 141780 105100 129860 114850 130200 96141 96106 67826 141000 125120 84357 47466 99485 88295 147720 134610 120730 134190 142480 108000 133660 115490 131180 98461 100630 71921 134370 118290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62534000 5108 1411 4843 9565 7755 7755 1 9606 Homo sapiens -0.03620213475812761 DVDIIDHHDNTYTVK Unmodified 1783.8377 0.83769228 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 0 3.5 1.12 1 1 1 1 45.716 45.786 4 0.00013057 12229 20230619_1882_Aki_TMTPro18x_K_F3 95.651 84.037 123850 74031 107490 122780 121160 157710 94265 77441 103930 130540 162770 163030 157560 129780 128290 157980 156480 172550 114200 68251 110840 120270 124300 154880 96976 86195 107780 130110 163960 162900 159540 136470 132700 159030 149550 163680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1487099999.9999998 5109 3484 4844 9566;9567;9568;9569 7756 7756 1 9606 Homo sapiens -0.022873054750562005 DVDLEFLAK Unmodified 1048.5441 0.54407645 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0TAQ1;Q96IF9;Q0IIN5;Q9NTC4 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 4 0.707 1 2 1 61.755 61.782 3 0.0040883 19165 20230619_1882_Aki_TMTPro18x_K_F3 66.692 38.95 84867 69963 102440 108650 95089 103410 103790 107180 123660 118230 116500 112200 121920 113780 116680 123330 126990 134350 78612 64354 102520 106440 99544 105010 104800 109530 124590 118730 120090 114250 124100 117810 119350 124380 121450 127460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 485020000 5110 3656 4845 9570;9571;9572;9573 7757;7758;7759 7757 3 9606 Homo sapiens 0.02174617003538515 DVDNALR Unmodified 801.39808 0.39808091 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 2 0 1 36.925 36.985 2 0.058337 8482 20230619_1881_Aki_TMTPro18x_K_F2 75.972 35.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5111 1292 4846 9574 7760 7760 1 9606 Homo sapiens -0.010562207218640651 DVDNAYMIK Unmodified 1067.4957 0.49574604 2787 CON__P35908v2;CON__P35908;P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 4 0 1 50.573 50.605 2 0.0016139 14260 20230619_1883_Aki_TMTPro18x_K_F4 103.55 71.326 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5112 2787 4847 9575 7761 7761 1 9606 Homo sapiens -0.035301999080502355 DVDSLLAK Unmodified 859.4651 0.46509784 4798 yes no 0 0 0 4 0.707 1 2 1 47.603 47.662 3 0.0044142 12902 20230619_1883_Aki_TMTPro18x_K_F4 86.011 1.5351 + 1218300 711860 968400 1146800 1305500 1369100 1232000 1301100 1802200 1191000 1449800 1424800 1678000 1272600 1259100 1416300 1711800 1546800 1122600 656110 1010600 1124500 1328500 1365500 1263600 1330800 1787600 1218000 1513200 1431300 1684900 1326100 1313400 1427800 1632300 1468400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1302300000 5113 4798 4848 9576;9577;9578;9579 7762 7762 1 9606 Homo sapiens 0.029743897692469545 DVDTYYLSNLVK Unmodified 1428.7137 0.71366097 206 D2CPI9;D2CPJ0;X5DRB1;D9I4E1;A8K146;A0A024R2M8;Q01831-2;Q01831 XPC DNA repair protein complementing XP-C cells yes no 0 0 0 7 0 1 61.952 61.991 3 0.014061 18711 20230619_1887_Aki_TMTPro18x_K_F7 64.121 18.841 195980 163860 202870 241830 207060 259140 221270 221140 257360 275510 267900 275240 282360 261810 252810 300370 289080 333400 181300 150620 205840 237870 215380 259700 223450 230040 260730 275560 275040 278950 286490 272520 259880 302930 276550 316160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195830000 5114 206 4849 9580 7763 7763 1 9606 Homo sapiens 0.0164526849541744 DVECGEGHFCHDNQTCCR Unmodified 2279.8201 0.82010321 2502 B4DJI2;P28799;K7EKL3;K7EQ05;B4E1G5;P28799-3;K7EQI0 GRN Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 yes no 0 0 0 1.5 0.5 1 1 31.834 31.865 4 4.4116E-30 6441 20230619_1881_Aki_TMTPro18x_K_F2 223.29 220.4 6365 5499.7 8331.5 8534.7 8858.8 7931.2 5294.3 6699.4 9818.5 8768.6 10753 8799 9697.1 6183 7340.2 10776 9189.9 8364.6 5902.6 5057.8 8302.6 8357.4 9055.2 8040.8 5695.9 6984.4 9781.6 8754.3 10922 8854.3 9804.9 6712.5 7626.8 10609 8769.2 7973.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28373000 5115 2502 4850 9581;9582 7764 7764 1 9606 Homo sapiens -0.26861403397742833 DVEDEILWVGER Unmodified 1458.6991 0.69907354 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1 0 1 62.086 62.086 2 4.7027E-13 19326 20230619_1880_Aki_TMTPro18x_K_F1 211.86 188.34 94234 63957 69887 80756 80511 95590 104080 92349 121160 109480 96699 114640 123280 107830 112030 133040 113150 135000 86856 58738 73273 80358 83546 95438 104020 95044 121510 109930 101670 115890 124470 112780 114300 133330 108400 128120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81951000 5116 2337;3778;3779 4851 9583 7765 7765 1 9606 Homo sapiens -0.011928036527251606 DVEDFLSPLLGK Unmodified 1331.6973 0.69728262 325 A0A024R578;Q13405;H0YDP7;Q59GE9 MRPL49 39S ribosomal protein L49, mitochondrial yes no 0 0 0 6 0.816 1 1 1 65.246 65.284 3 7.1688E-05 20223 20230619_1887_Aki_TMTPro18x_K_F7 114.86 83.223 82838 75760 87490 96298 91577 103720 95161 104810 107500 107120 105570 93732 119070 99913 99334 103420 105340 114660 76690 69502 88606 95656 94909 104330 96167 107020 108790 107740 108910 96009 120140 103100 101710 104490 100800 108750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165300000 5117 325 4852 9584;9585;9586 7766 7766 1 9606 Homo sapiens 0.04470187329320652 DVEDMFSR Oxidation (M) 1013.4124 0.41241035 3938 Q15717;Q15717-2;M0QZR9;M0R055 ELAVL1 ELAV-like protein 1 yes no 0 1 0 1.5 0.5 1 1 41.449 41.488 2 0.039067 10724 20230619_1880_Aki_TMTPro18x_K_F1 70.856 59.787 97249 66559 76639 93286 112280 111340 107900 111680 133880 99754 104770 99912 113060 89003 101660 112550 121690 112480 89674 61195 80196 92208 113680 111220 109800 113720 133690 101520 109190 101110 114570 93453 104740 112690 116180 106870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82178000 5118 3938 4853 9587;9588 7767 7767 2616 1 9606 Homo sapiens -0.09375936355866088 DVEDMFSR Unmodified 997.4175 0.41749572 3938 Q15717;Q15717-2;M0QZR9;M0R055 ELAVL1 ELAV-like protein 1 yes no 0 0 0 1.5 0.5 1 1 51.657 51.68 2 0.0016199 15169 20230619_1881_Aki_TMTPro18x_K_F2 155.88 121.05 281060 232230 255720 285060 240450 336070 273430 308500 382920 355620 328230 301770 359660 299480 310130 373400 350920 357180 259710 213050 261900 284180 252680 335150 277250 318150 381760 355370 340470 308850 363730 312990 318830 372950 335410 339400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 401900000 5119 3938 4853 9589;9590 7768 7768 1 9606 Homo sapiens -0.08131632493257257 DVEEEKFPTQLSR Unmodified 1576.7733 0.77330111 1896 A0MNN4;Q2TAY7;Q2TAY7-2 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes no 0 0 1 3.5 0.5 1 1 47.215 47.275 3 0.013737 12912 20230619_1882_Aki_TMTPro18x_K_F3 66.331 46.225 248590 223470 263230 243140 263680 264920 287440 265600 247550 290010 315040 226520 258690 186160 321180 227340 274580 265350 230120 204720 266040 244390 274080 266420 287320 271950 257260 289700 317160 231670 268430 195850 322400 230210 263100 251660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 191130000 5120 1896 4854 9591;9592 7769 7769 1 9606 Homo sapiens 0.00798539438824264 DVEEGDEKFE Unmodified 1195.4881 0.48807771 1128 A0A0S2Z5I7;Q9Y3A5;A0A8V8TMR6;A0A8V8TLA5;A0A8V8TLC6 SBDS Ribosome maturation protein SBDS yes no 0 0 1 1 0 1 46.246 46.246 2 0.00010962 12812 20230619_1880_Aki_TMTPro18x_K_F1 145.72 108.38 127200 97756 103150 131330 123970 134730 121750 128000 180780 150570 157300 163060 181920 139380 126160 196940 191520 161640 117390 89791 107260 129850 127230 135820 124690 131840 179840 151420 163520 164240 182220 147600 133260 194790 182410 154010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78413000 5121 1128 4855 9593 7770 7770 1 9606 Homo sapiens -0.10184680694601411 DVEFEVVGDAPEK Unmodified 1432.6722 0.67219008 1535 B3KMZ6;B2RDF5;A0A3R5W301;Q9UBT2;Q9UBT2-2;B3KNA3;U3KQ93 UBA2 SUMO-activating enzyme subunit 2 yes no 0 0 0 2 0.816 1 1 1 55.614 55.635 3 1.5199E-06 16851 20230619_1881_Aki_TMTPro18x_K_F2 105.43 86.595 89835 72848 91371 104730 81427 102800 97126 106430 124630 118950 119610 133610 139710 121420 103730 157810 137970 170440 83075 66949 92637 103080 85925 104120 97910 108810 125220 120000 123890 134590 140300 127580 108320 158520 131910 161630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 347220000 5122 1535 4856 9594;9595;9596 7771;7772 7772 2 9606 Homo sapiens -0.026839122639103152 DVEGSTSPQIGDK Unmodified 1331.6205 0.62048887 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;E9PLT0;E9PNG3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;Q9UG93 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 yes no 0 0 0 3 0 1 43.298 43.368 3 0.0006202 11091 20230619_1882_Aki_TMTPro18x_K_F3 90.412 44.004 58556 39691 54903 64043 64707 67952 61548 62587 93775 78402 80805 105940 103970 80685 64373 106480 107240 124350 54059 36556 56271 62679 66395 68275 63225 64752 93184 79259 84637 105390 103490 85470 68757 107440 102310 117860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58813000 5123 88 4857 9597 7773 7773 1 9606 Homo sapiens -0.03205655957822273 DVEQQFK Unmodified 892.42905 0.42904669 3892 Q4ZG57;Q14566 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 4 0.816 1 1 1 44.211 44.277 2 0.02892 11433 20230619_1883_Aki_TMTPro18x_K_F4 101.33 35.07 217490 142000 208970 229260 203990 239220 224820 215230 293440 286260 319430 302230 300170 262160 241870 274450 362970 273700 200790 130810 213050 224330 213080 240460 227630 223500 296030 286050 325440 304690 304340 272350 253790 275520 345500 260300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 391270000 5124 3892 4858 9598;9599;9600 7774 7774 1 9606 Homo sapiens -0.021470674076113028 DVESYIHR Unmodified 1017.488 0.48795855 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;Q9NR30-2 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 3.5 0.5 1 1 40.87 40.921 3 1.1616E-07 9927 20230619_1883_Aki_TMTPro18x_K_F4 194.2 163.94 464040 316880 377940 456040 436670 420580 449450 445830 559430 567080 501640 505480 570230 446090 415900 597470 491510 483900 427980 291430 392350 448470 449160 428640 455760 457000 561790 564730 520230 513910 572260 470180 430810 591110 469490 460840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 515810000 5125 1748 4859 9601;9602 7775;7776;7777 7777 3 9606 Homo sapiens -0.020085911132809997 DVETLEAPEGRPDSGVPSLR Unmodified 2123.0495 0.049475973 2715 B7ZMD6;Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes no 0 0 1 3 0 1 49.024 49.101 3 4.4583E-26 13742 20230619_1882_Aki_TMTPro18x_K_F3 200.67 182.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5126 2715 4860 9603 7778 7778 1 9606 Homo sapiens 0.032873214252049365 DVETLQQTIEEK Unmodified 1431.7093 0.70930387 1791 Q14789-2;A0A8Q3SHP0;Q14789;Q14789-3;Q14789-4;A0A8J9C4H3;E7EU81;A0A8Q3WKE2;A0A8Q3SHI9;C9J8Q0;A0A8Q3SHH2;A0A8Q3WK92;A0A8Q3WKA7;H0Y867;A0A8Q3SHQ4;A0A8Q3WLC9;A0A8Q3SHQ5;H7C5I7;A0A8Q3SHM0;A0A8Q3SHH5;A0A8Q3SHQ9;B4DTZ9;B4DL98;B4DQW7 GOLGB1 Golgin subfamily B member 1 yes no 0 0 0 2 0 1 56.838 56.854 3 0.0047351 17338 20230619_1881_Aki_TMTPro18x_K_F2 62.338 37.484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5127 1791 4861 9604 7779 7779 1 9606 Homo sapiens 0.010717592818537014 DVEVTKEEFVLAAQK Unmodified 1704.8934 0.89341625 4002 Q53GR7;Q9UJS0;Q9UJS0-2;B7Z2E2;Q75KX8 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes no 0 0 1 5 0 1 58.848 58.902 3 0.0064856 17446 20230619_1885_Aki_TMTPro18x_K_F5 62.287 50.495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5128 4002 4862 9605 7780 7780 1 9606 Homo sapiens 0.06916527712564857 DVEVVRPLEK Unmodified 1182.6608 0.66083754 2830 D3DVC4;P48681 NES Nestin yes no 0 0 1 5 0.816 1 1 1 45.806 45.874 3 0.00074806 11982 20230619_1885_Aki_TMTPro18x_K_F5 99.276 67.904 423610 334210 356210 357580 423090 496730 564290 541220 700480 558920 487260 445530 619060 420560 448860 660910 504490 488930 391100 306260 368670 361280 438490 492720 564480 549990 697170 560750 515270 457080 618950 447680 463680 650010 482040 466260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 749830000 5129 2830 4863 9606;9607;9608 7781 7781 1 9606 Homo sapiens 0.07681355223280661 DVFANYLTSNFQAPGVK Unmodified 1869.9261 0.92611336 4115 Q6NZY4;A8K559;Q6NZY4-2;F5H6J5;F5GX80 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes no 0 0 0 2.5 0.5 1 1 63.158 63.178 4 0.050323 19753 20230619_1882_Aki_TMTPro18x_K_F3 46.249 35.967 20642 15340 19784 21265 17775 20265 20822 18139 19193 25917 24881 21482 27001 20490 21624 25460 24024 22927 19069 14097 20148 20969 18702 20516 20774 18897 19904 25631 25327 21983 27214 21445 22236 25354 22955 21807 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95436000 5130 4115 4864 9609;9610 7782 7782 1 9606 Homo sapiens 0.02594734835406598 DVFFYQADDEHYIPR Unmodified 1913.8584 0.85842773 3493 P23258;A0A1B4Z394;A0A7P0T9G6;Q9NRH3;K7EIS0;K7EKE5 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain;Tubulin gamma chain yes no 0 0 0 3.5 1.12 1 1 1 1 56.254 56.285 3 6.7473E-19 16885 20230619_1882_Aki_TMTPro18x_K_F3 205.28 188.2 194920 156040 179210 196450 170900 208230 206190 200530 240210 210950 201230 194960 208120 184530 215990 233750 227080 224800 180090 143200 183360 195220 179340 209430 206880 205690 241180 212230 208610 198370 212660 193270 220200 233560 217150 213620 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 320950000 5131 3493 4865 9611;9612;9613;9614 7783;7784;7785;7786 7784 4 9606 Homo sapiens -0.06194715095398351 DVFHMVVEVPR Oxidation (M) 1342.6704 0.67035637 3922 Q15181;V9HWB5;Q5SQT6 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 1 0 5 0.816 1 1 1 48.588 48.652 3 4.9781E-05 13286 20230619_1886_Aki_TMTPro18x_K_F6 126.71 96.902 141130 106940 115270 140410 143920 117830 134770 127840 160220 128740 145230 122520 141770 115710 136930 146880 129640 131980 130240 98207 119770 138720 146760 121210 137180 130010 161100 129940 149420 124570 144530 121240 138980 146250 124120 125500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 768630000 5132 3922 4866 9615;9616;9617 7787;7788 7788 2595 2 9606 Homo sapiens 0.012728002371432012 DVFHMVVEVPR Unmodified 1326.6754 0.67544174 3922 Q15181;V9HWB5;Q5SQT6 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 0 0 6.5 0.5 1 1 55.509 55.577 3 1.3692E-07 16240 20230619_1886_Aki_TMTPro18x_K_F6 168.94 148.1 149660 126530 144670 140590 106840 140320 143540 134980 146280 183240 164130 154600 174740 140150 150120 181620 161120 172420 138370 115960 146810 140900 115120 141790 142760 139580 149760 181660 167950 157760 176760 147300 153870 181230 154130 163820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 304060000 5133 3922 4866 9618;9619 7789;7790 7789 2 9606 Homo sapiens 0.025171040997747696 DVFIIQTVSK Unmodified 1148.6441 0.64412484 16 E7EPA1;B2R7R5;A0A024QYY3;O60256-3;O60256;C9K0K7;C9JDU5;C9JJS3;I3L331;I3L164;C9JDH0;E7EW35 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes no 0 0 0 4.5 3.5 1 1 59.798 59.816 3 0.010794 18420 20230619_1880_Aki_TMTPro18x_K_F1 68.069 48.307 74632 64883 73646 76156 57624 66464 68767 73180 84438 74624 69253 57025 76550 61907 68741 88770 72921 66548 69029 59486 74664 75887 61469 68109 69214 74336 84521 74828 72004 58950 77515 65117 70379 87472 69686 63466 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55436000 5134 16 4867 9620;9621 7791;7792 7791 2 9606 Homo sapiens 0.07574854337326542 DVFRDPALK Unmodified 1059.5713 0.57129425 166 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7;Q6LCU2 RPL27 60S ribosomal protein L27 yes no 0 0 1 6.5 1.12 1 1 1 1 47.197 47.27 3 0.0011372 12281 20230619_1887_Aki_TMTPro18x_K_F7 101.48 74.383 1736200 1463500 1439300 1678500 1693900 1806400 1798000 1925300 2402300 1952300 1836700 1600300 2001600 1663300 1615600 2282200 1909900 1791000 1603500 1341600 1492000 1679400 1743300 1820100 1825100 1958700 2389800 1962000 1916200 1644700 2019600 1746200 1669600 2254000 1823800 1706700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2779500000 5135 166 4868 9622;9623;9624;9625 7793;7794 7794 2 9606 Homo sapiens 0.04389145334539535 DVFSPIGER Unmodified 1018.5084 0.50835964 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B3KU93;A0A8V8TQ95;B7Z1H4;B7Z1V9 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 4 0.816 1 1 1 49.591 49.654 2 2.0629E-05 13825 20230619_1883_Aki_TMTPro18x_K_F4 168.54 114.65 352730 329200 338590 342690 337990 376670 377140 410040 448270 417240 444000 408050 424640 372550 413770 467410 422530 495230 326340 301420 345150 345680 352310 379220 380330 416620 452370 421010 454670 413730 433550 390520 421760 469550 404690 469810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 347830000 5136 2933 4869 9626;9627;9628 7795 7795 1 9606 Homo sapiens -0.00015420453473780071 DVGAQILLHSHK Unmodified 1316.7201 0.72008375 2598 Q96KP4;B4DV28;A0A024R382;Q96KP4-2;B4DPF1;Q9NW02;Q9H7K8 CNDP2;FLJ00064 Cytosolic non-specific dipeptidase yes no 0 0 0 4.5 3.5 1 1 45.037 45.051 4 9.6058E-07 12328 20230619_1880_Aki_TMTPro18x_K_F1 146.07 121.78 91483 60910 71939 78807 73391 87353 80813 81580 124150 83297 92291 98934 96562 92123 79475 102490 110970 107460 84344 55959 74770 78218 76504 87526 82364 83799 122610 84675 96388 99505 97725 95751 82978 103050 105850 102030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 116080000 5137 2598 4870 9629;9630 7796;7797;7798 7797 3 9606 Homo sapiens 0.07439251237474309 DVGNLLR Unmodified 785.43955 0.43955179 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JVD8;C9J578 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 6.5 0.5 1 1 46.803 46.889 2 0.039727 12546 20230619_1886_Aki_TMTPro18x_K_F6 90.862 38.844 126580 107680 127890 127820 125610 132740 127730 128600 169570 137260 161180 127790 139110 116960 149210 155020 146220 120680 117080 98741 129750 127530 130730 133800 129990 131900 169890 138050 164580 129970 143140 122980 151410 153260 139760 115080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 340090000 5138 4593 4871 9631;9632 7799 7799 1 9606 Homo sapiens 0.03824960037479741 DVGRPNFEEGGPTSVGR Unmodified 1772.8442 0.84417465 288 Q6Y7W6;Q6Y7W6-5;Q6Y7W6-4;A0A024R4A5;E7ESB6;B4DRT8 GIGYF2;TNRC15 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 0 0 1 4 0 1 40.797 40.84 3 4.7957E-38 9903 20230619_1883_Aki_TMTPro18x_K_F4 204.23 186.83 215170 168940 196490 229070 201180 245610 231850 241790 247360 267050 250580 272830 294830 220390 243530 308760 290890 284370 198770 155180 201460 226540 209640 246910 232530 247930 251450 268620 259010 274920 296900 233840 251510 307280 277820 270370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 337090000 5139 288 4872 9633 7800 7800 1 9606 Homo sapiens -0.011333675236983254 DVGRPQPGR Unmodified 980.51518 0.51517635 1438 A0A384MTL2;P37802;P37802-2;X6RJP6;B7Z5A2 TAGLN2 Transgelin-2 yes no 0 0 1 5 0 2 24.494 24.562 3 6.5225E-05 3887 20230619_1885_Aki_TMTPro18x_K_F5 128 102.19 115190 52057 152320 141810 153460 161270 169120 203720 206190 167720 197340 228180 234320 188220 164920 100770 227250 210200 106500 48486 151610 136000 159600 162380 170860 204100 207490 173240 204630 227220 234630 191040 171970 109050 216710 198560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 185800000 5140 1438 4873 9634;9635 7801;7802 7801 2 9606 Homo sapiens 0.02413937217761486 DVHLELK Unmodified 852.47052 0.47051757 1372 E5RHA5;V9GYZ0;Q6P1K9;A0A2R8YF29;B3KWN3;A0A8C8KBT8;Q8TE04-3;Q9H999;Q8TE04-2;Q8TE04-4;Q9BZ23-3;Q9BZ23-4;Q9BZ23;Q8TE04 PANK3;PANK2;PANK1 Pantothenate kinase 1;Pantothenate kinase 3;Pantothenate kinase 2, mitochondrial yes no 0 0 0 4.5 0.5 1 1 45.147 45.208 3 0.0054871 11839 20230619_1883_Aki_TMTPro18x_K_F4 101.99 67.181 40969 24395 33511 37097 33503 35482 37278 37591 44876 40740 52042 52082 52588 38089 41747 56133 48809 49883 37761 22466 34680 36387 34919 36041 37614 38354 45543 41345 53065 51916 53093 40713 43114 55724 46640 47442 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45257000 5141 1372 4874 9636;9637 7803 7803 1 9606 Homo sapiens 0.038381133517077615 DVHNIYGLYVHMATADGLR Unmodified 2144.0473 0.047307904 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 2 0 1 59.117 59.129 4 5.0036E-31 18270 20230619_1881_Aki_TMTPro18x_K_F2 227.47 204.57 21905 12565 22578 23226 19656 21616 22540 19908 27235 22963 25414 27156 27556 28626 27368 29034 24656 34382 20222 11604 22838 22542 20728 21927 22706 20558 27394 23191 26271 27430 28078 29485 27696 29465 23684 32563 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16872000 5142 3900;2497 4875 9638 7804 7804 1 9606 Homo sapiens 0.021046142064278683 DVHTLLDR Unmodified 967.50869 0.50869399 4560 Q9NPD3;A0A994J4D9;E9PI41 EXOSC4 Exosome complex component RRP41 yes no 0 0 0 3.5 0.5 1 1 42.028 42.081 3 0.00022667 10442 20230619_1883_Aki_TMTPro18x_K_F4 144.09 114.01 101340 37985 100080 99587 100630 97263 98369 98672 117860 118480 128980 131910 138650 107470 109810 142670 130540 131620 93376 35398 101740 95379 104340 98488 99968 101260 119440 119080 132220 132500 139760 113540 113500 142090 124700 125130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184810000 5143 4560 4876 9639;9640 7805;7806 7806 2 9606 Homo sapiens 0.02363999266378869 DVIAINQDPLGK Unmodified 1281.6929 0.69286595 1530 A0A6Q8PFA9;Q53Y83;Q53HF3;A0A3B3IUC4;P06280;A0A6Q8PHD1 GLA Alpha-galactosidase A yes no 0 0 0 5.5 0.5 1 1 57.201 57.266 3 0.0022475 16770 20230619_1885_Aki_TMTPro18x_K_F5 61.11 43.379 179970 140880 154170 175310 205210 188570 183210 192780 215320 175080 188380 158810 187710 150410 182420 194310 159140 171870 166170 129280 159590 174390 208330 189870 187000 196150 216390 177460 194330 161860 191250 157780 184390 193280 152580 163440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 322650000 5144 1530 4877 9641;9642 7807;7808 7807 2 9606 Homo sapiens 0.06328722906391704 DVIATDK Unmodified 760.39668 0.39668393 3570 V9HWF2;P40925;P40925-3;A0A5K1VW95;C9JF79;C9JRL4;C9JLV6 HEL-S-32;MDH1 Malate dehydrogenase;Malate dehydrogenase, cytoplasmic yes no 0 0 0 4 0 1 42.368 42.412 2 0.067448 10582 20230619_1883_Aki_TMTPro18x_K_F4 73.248 28.527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5145 3570 4878 9643 7809 7809 1 9606 Homo sapiens 0.006901451893895683 DVIATDKEDVAFK Unmodified 1449.7351 0.73512469 3570 V9HWF2;P40925;P40925-3;A0A5K1VW95;C9JF79;C9JRL4;C9JLV6 HEL-S-32;MDH1 Malate dehydrogenase;Malate dehydrogenase, cytoplasmic yes no 0 0 1 4.5 0.5 1 1 51.986 52.036 3 3.2645E-08 14887 20230619_1883_Aki_TMTPro18x_K_F4 143.38 107.07 256510 203010 236690 268430 280790 289990 307450 301150 297950 328660 321860 278580 337680 283720 303900 305200 297840 240380 236990 186410 242950 265960 288670 291870 308150 307580 305250 329100 329530 285350 342440 293590 309270 302820 284630 229210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1291400000 5146 3570 4879 9644;9645 7810 7810 1 9606 Homo sapiens 0.028246535241123638 DVICLIK Unmodified 859.48372 0.48372479 1809 A0A8V8NBT1;Q12769;G3V198;E9PR16;Q12769-3 NUP160 Nuclear pore complex protein Nup160 yes no 0 0 0 8 0 1 58.277 58.323 3 0.031993 17106 20230619_1888_Aki_TMTPro18x_K_F8 68.422 11.318 38238 35607 40455 43699 45073 48888 39317 41960 51596 47014 45547 41679 54353 40907 41022 60596 51616 53264 35405 32652 40992 43528 46308 48890 40373 43474 51646 47103 47358 42578 54538 43284 42642 60102 49295 50662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27156000 5147 1809 4880 9646 7811 7811 1 9606 Homo sapiens 0.04836228139447485 DVIDEPIIEEPSR Unmodified 1510.7515 0.75150304 577 A0A024R9J0;O60216;A0A8I5KWV3 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 0 0 1 0 1 53.392 53.392 2 2.3031E-12 15715 20230619_1880_Aki_TMTPro18x_K_F1 226.4 193.17 72383 57363 65241 74222 64986 80656 76431 71723 89553 86256 89905 89540 101800 80481 79374 99042 86910 101890 66863 52661 66933 73634 67930 80841 76799 74302 90508 86517 92721 90461 102410 84334 81639 99329 83186 96693 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 240560000 5148 577 4881 9647 7812 7812 1 9606 Homo sapiens 0.01655734690234567 DVIEEHGPSEK Unmodified 1238.5779 0.57789577 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;P51114-3;B4DM78;H7C4S4 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 0 2 0.816 1 1 1 38.277 38.316 3 1.4346E-05 8925 20230619_1882_Aki_TMTPro18x_K_F3 142.19 108.96 258870 212470 232930 269560 307440 322420 269940 270790 401520 299870 321140 293780 309380 276160 251650 333090 346580 308460 239180 194990 240080 268130 312630 320880 278320 280980 398120 301650 332440 298090 313620 288380 262590 332210 330430 293370 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 317500000 5149 1029 4882 9648;9649;9650 7813;7814;7815 7815 3 9606 Homo sapiens -0.0318500629537084 DVIEEYFK Unmodified 1041.5019 0.50187728 3501 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 0 3.5 0.957 1 2 2 1 60.971 60.992 2;3 0.0027265 18826 20230619_1882_Aki_TMTPro18x_K_F3 131.06 68.348 1393700 1148200 1180300 1453700 1364400 1545300 1385200 1469500 2273300 1744000 1537900 1429000 1583800 1368800 1334600 1869300 1193500 1613300 1287200 1053700 1221200 1443700 1405800 1553800 1422300 1513400 2235300 1739800 1613200 1463600 1603300 1440300 1357000 1854400 1146200 1533500 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 4421200000 5150 3501 4883 9651;9652;9653;9654;9655;9656 7816;7817;7818;7819;7820 7817 5 9606 Homo sapiens -0.017213584048704433 DVIELTDDSFDK Unmodified 1395.6406 0.64055561 1478 A0A384NPU5;Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 0 2.33 1.11 2 1 2 1 60.746 60.763 2;3 2.1435000000000002E-45 18798 20230619_1880_Aki_TMTPro18x_K_F1 265.01 235.54 292870 244260 270250 277900 265050 304440 303280 314700 329570 375580 372780 387870 393620 341110 375070 443580 409360 436720 270670 223910 276400 278350 276890 306110 304510 322350 336250 376560 381500 391660 400240 358790 384010 443510 391530 414770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 560870000 5151 1478 4884 9657;9658;9659;9660;9661;9662 7821;7822;7823;7824 7821 4 9606 Homo sapiens -0.041439050178723846 DVIIADCGK Unmodified 989.48518 0.48518136 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 0 0 4 0.816 2 2 2 47.854 47.919 2;3 0.00066442 13182 20230619_1882_Aki_TMTPro18x_K_F3 141.48 95.054 1489700 1142400 1254300 1316700 1565500 1604500 1575600 1532300 2073500 1761900 1966900 2014600 2057800 1637500 1815300 2239200 2180200 2163100 1375100 1047700 1298700 1319500 1602200 1599600 1603000 1576400 2079000 1776700 2027100 2021600 2085500 1733600 1872600 2235000 2082300 2055400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4344200000 5152 1716 4885 9663;9664;9665;9666;9667;9668 7825;7826;7827;7828 7825 4 9606 Homo sapiens -0.00998182562443617 DVIINQEGEYIK Unmodified 1419.7246 0.72456001 4548 Q9HC35;Q9HC35-2;B6EXY3;C1PHA1;J7MA22;C1PHA0 EML4;EML4-ALK variant 7;EML4-ALK;EML4-ALK variant 6 Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 0 3.25 0.829 1 1 2 53.866 53.898 2;3 2.8715E-07 15775 20230619_1883_Aki_TMTPro18x_K_F4 154.66 134.87 88974 67293 82209 80549 71047 77928 85371 73405 92402 91747 96168 91944 93328 85258 96301 108020 93497 107550 82181 61740 83892 80247 75075 78919 85471 75849 93883 91763 98360 93145 95516 89347 97792 108120 89582 102110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 432020000 5153 4548 4886 9669;9670;9671;9672 7829;7830 7830 2 9606 Homo sapiens 0.031486708697229915 DVINVFHR Unmodified 998.52976 0.52976379 3134 J3KRL1;J3QSH2;Q96S94-5;Q96S94-2;Q96S94-4;Q96S94 CCNL2 Cyclin-L2 yes no 0 0 0 8 0 1 45.879 45.918 3 0.014698 11854 20230619_1888_Aki_TMTPro18x_K_F8 78.77 57.798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5154 3134 4887 9673 7831 7831 1 9606 Homo sapiens 0.030440093659080958 DVIRPGMR Unmodified 942.50692 0.50691985 3503 Q6FI51;Q6FHS4;P25685;A0A7I2V3K7;P25685-2;B4DKK9 DNAJB1 DnaJ homolog subfamily B member 1 yes no 0 0 1 4.5 3.5 1 1 34.126 34.124 3 0.0016078 7647 20230619_1880_Aki_TMTPro18x_K_F1 117.4 70.833 103330 80572 98435 116360 118920 139930 123040 126990 154020 134500 156960 161820 168570 141690 130280 140180 193590 177990 95481 74063 100840 114810 122130 139340 124770 130820 155200 136410 161390 162320 169900 146800 136680 142990 184500 168710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63010000 5155 3503 4888 9674;9675 7832;7833 7832 2 9606 Homo sapiens 0.03336666976781544 DVITHVVCTK Unmodified 1170.6067 0.60669348 1443 F5H7P7;B4DT22;A0A384MTS1;Q96BP3;D6R9Q1;D6RB19;D6RHV0 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes no 0 0 0 8 0 1 45.256 45.284 3 0.00052829 11598 20230619_1888_Aki_TMTPro18x_K_F8 100.55 85.352 57612 49202 53851 53321 60556 66299 62735 60847 68870 69523 71110 68061 72549 57825 68243 77582 75733 69883 53258 45079 55115 53704 62434 65953 63321 62760 69925 69753 72901 68839 73773 61039 69933 77190 72348 66479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114720000 5156 1443 4889 9676 7834 7834 1 9606 Homo sapiens 0.028214398000500296 DVKPDNMLLDK Unmodified 1286.654 0.6540376 1340;1153 A0A2P9DU05;A0A8V8TL82;O75116;D6REE7;A0A0U1RQV4;D9ZGF8;Q13464 ROCK2;ROCK1 Rho-associated protein kinase 2;Rho-associated protein kinase;Rho-associated protein kinase 1 no no 0 0 1 6 0 1 51.152 51.229 3 0.038121 14453 20230619_1886_Aki_TMTPro18x_K_F6 55.213 31.382 122350 106280 133910 129820 117920 132870 130360 119900 132890 160880 160790 148490 157080 125430 153540 165090 169600 166180 113260 97474 134800 129240 124050 133850 130870 124520 136490 159970 163440 150550 160210 132310 157140 165280 162100 157840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44616000 5157 1340;1153 4890 9677 7835 7835 1 9606 Homo sapiens 0.02217674280382198 DVKPENLLYTSK Unmodified 1405.7453 0.74529545 3603 P49137-2;P49137;C9J8E1;B5BUJ8;B2R8Z2;A8K4K4;A0A024R2W7;Q16644 MAPKAPK2;MAPKAPK3 MAP kinase-activated protein kinase 2;MAP kinase-activated protein kinase 3 yes no 0 0 1 7.5 0.5 1 1 51.204 51.281 3 0.0032289 14017 20230619_1888_Aki_TMTPro18x_K_F8 73.386 58.825 114790 86388 93111 119020 146400 173520 146910 141340 174930 163180 138530 129810 181190 124740 132590 176150 152670 142060 105920 79377 97388 118130 148040 170510 148850 147140 175280 162800 145610 133180 181090 131680 137020 174150 145810 135330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200840000 5158 3603 4891 9678;9679 7836 7836 1 9606 Homo sapiens 0.05865261249368814 DVKPHNVMIDHQQK Oxidation (M) 1703.8413 0.84133787 3067 P19784;H3BNI9 CSNK2A2 Casein kinase II subunit alpha' yes no 0 1 1 7 0 1 35.182 35.254 5 0.031219 7513 20230619_1887_Aki_TMTPro18x_K_F7 50.843 34.537 23558 15322 23736 25581 31120 31029 27122 29927 30066 28608 27282 25117 29733 23531 28440 24072 30318 24650 21757 14121 24214 25047 31607 30929 27677 30599 30369 28878 28219 25601 30196 24368 29018 24233 28951 23427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58439000 5159 3067 4892 9680 7837 7837 1791 1 9606 Homo sapiens 0.017570858178032722 DVKPKPIADAK Unmodified 1180.6816 0.68157298 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;A0A024R2V0;P27816-4;Q86Y04;P27816-5;B5MEG9;H7C4C5 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 2 8 0 1 41.19 41.184 4 0.062934 9978 20230619_1888_Aki_TMTPro18x_K_F8 49.929 34.727 62876 48083 64006 62097 76608 73407 70254 70073 70305 64287 82589 51383 52939 33661 83774 34182 38399 25973 58125 44147 65087 61715 78299 73318 71233 71648 72054 64875 82703 52208 56284 35384 81865 34059 37092 24802 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32715000 5160 2902 4893 9681 7838 7838 1 9606 Homo sapiens 0.0984594560293317 DVKPSNILVNSR Unmodified 1340.7412 0.74121312 1774;3554 A0A8I5KVF6;A0A8I5QJL9;A0A8I5QJ96;A0A8I5KYS7;B4DFY5;A4QPA9;A0A8I5KYB4;Q02750-2;Q02750;A0A8I5KXN4;P36507;Q7Z370;B3KS97 MAP2K1;MAP2K2;DKFZp686L02273 Dual specificity mitogen-activated protein kinase kinase 1;Dual specificity mitogen-activated protein kinase kinase 2 no no 0 0 1 1.5 0.5 1 1 44.442 44.484 3 0.062969 11890 20230619_1881_Aki_TMTPro18x_K_F2 45.992 24.993 369040 286200 390340 366050 401950 377210 410950 408100 430990 412690 401940 342560 367010 282580 416360 345290 337860 237740 341290 262730 394690 363400 416200 381470 414570 414870 436850 414620 411990 348990 377710 296800 417750 340290 323330 227310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 354800000 5161 1774;3554 4894 9682;9683 7839 7839 1 9606 Homo sapiens 0.08447216546323943 DVLDVYIEHR Unmodified 1257.6354 0.63535107 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B4DDF5;P33993-2;A0A0S2Z441 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 2.5 0.5 1 1 51.697 51.749 3 6.503E-10 14909 20230619_1882_Aki_TMTPro18x_K_F3 175.15 127.15 163090 129980 168880 168730 155690 163020 166070 160310 219940 174870 197880 189300 193680 189250 172670 207150 197320 204610 150830 119330 170850 167150 163040 165250 168530 164420 219960 176530 203790 191610 197000 196040 177510 207660 188610 194340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 628200000 5162 1091 4895 9684;9685 7840;7841 7841 2 9606 Homo sapiens 0.01683880700852569 DVLETFTVK Unmodified 1050.5597 0.55972651 810 B4DPP0;A6NNI4;A0A2R8Y478;A0A7I2V3T7;G8JLH6;A0A087WU13;F5GXT1;P21926;A0A7I2V3T0 CD9 Tetraspanin;CD9 antigen yes no 0 0 0 7 0 1 59.951 59.997 2 6.7235E-06 17808 20230619_1887_Aki_TMTPro18x_K_F7 180.44 116.95 32112 21742 22067 53262 48081 85448 33116 32322 51393 49122 44441 56327 58714 54438 42644 65400 62945 87516 29584 20161 23868 51434 47810 82595 34792 37158 51097 49043 46607 56764 58766 56814 44900 66697 60200 82798 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10798000 5163 810 4896 9686 7842 7842 1 9606 Homo sapiens 0.036469035205982436 DVLETPVDLAGFPVLLSDTAGLR Unmodified 2397.2791 0.27914156 4318 Q96H44;Q969Y2-3;Q969Y2;Q969Y2-4;Q969Y2-2 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial yes no 0 0 0 6.5 0.5 1 1 66.83 66.863 3 1.7262E-08 20867 20230619_1887_Aki_TMTPro18x_K_F7 106.69 101.71 2755.7 3431.2 2316.9 1324.3 2321.4 2129.4 2469 3034.1 3080.6 2143 5540.8 2324.2 3879.2 2644.1 2511.7 3376.2 2757.5 2564.4 2553.1 3122.3 2383.5 1531.7 2413.4 2120.3 2503.5 3009.3 3189.6 2220.1 5470.4 2379.4 3939.9 2757.3 2596.8 3333.3 2634.7 2445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7506900 5164 4318 4897 9687;9688 7843 7843 1 9606 Homo sapiens 0.13639315318323497 DVLEVGELAK Unmodified 1071.5812 0.58119023 2895 E7EQ69;Q9GZZ1;C9J5D1;C9JZU6 NAA50 N-alpha-acetyltransferase 50 yes no 0 0 0 2.5 0.5 1 1 57.673 57.697 3 2.9311E-05 17470 20230619_1882_Aki_TMTPro18x_K_F3 142.83 86.097 79633 65915 75375 75544 60671 72622 75860 75047 84003 107320 99766 86197 97704 81198 91425 113470 98737 97537 73607 60430 76705 75497 64648 73727 75903 77357 85850 106050 101440 88347 99469 85638 93606 112550 94392 92814 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175490000 5165 2895 4898 9689;9690 7844 7844 1 9606 Homo sapiens 0.04826288549293167 DVLEYVVFEK Unmodified 1239.6387 0.63870511 812 A0A0G2JMS5;A0A087WU62;A0A087X2D5;B4DEF8;Q9BRJ2 MRPL45 39S ribosomal protein L45, mitochondrial yes no 0 0 0 5 0 1 63.597 63.642 3 0.015732 19586 20230619_1885_Aki_TMTPro18x_K_F5 64.906 40.012 121150 105230 122880 130390 112850 160410 135760 137360 194480 155670 146660 168870 185860 158870 148270 199600 185710 207980 112080 96527 124630 129990 119010 159300 137340 142400 192830 156880 154550 170490 186730 166370 153790 200220 177480 197370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94675000 5166 812 4899 9691 7845 7845 1 9606 Homo sapiens 0.028471307548443292 DVLGMAQDEMAQAFEDWNK Oxidation (M) 2212.9405 0.94051915 3630 P52209-2;P52209;B4E2U0;B4DL86;K7EPF6;B4DV68;K7ELN9 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 1 0 5.5 0.5 1 1 65.243 65.287 3 4.7787E-05 20296 20230619_1885_Aki_TMTPro18x_K_F5 87.16 82.722 4855.1 5424.4 4592.3 7133.9 4982.6 6937.5 5793.9 5727.3 7002.9 7369.4 7029.7 6423.6 5393.2 6317.1 6555.7 6847.5 5820.2 9350.1 4497.6 4975 4710.4 7054.9 5179.9 6998.4 5831.5 5981 7068.2 7332.7 7137.3 6560.2 5622.3 6546 6608.7 7010.9 5600.3 8841.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30752000 5167 3630 4900 9692;9693 7846 7846 2319 1 9606 Homo sapiens -0.11743348860909464 DVLGMAQDEMAQAFEDWNK Unmodified 2196.9456 0.94560453 3630 P52209-2;P52209;B4E2U0;B4DL86;K7EPF6;B4DV68;K7ELN9 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 5.5 0.5 1 1 66.453 66.496 3 0.0034592 20949 20230619_1886_Aki_TMTPro18x_K_F6 67.995 63.285 2880.5 3185.1 3061.1 4106.6 3849.4 3442.2 4303.5 5505.5 3934.3 5126.1 5255.8 3992 4289.7 4576 3646.4 4732.2 5444 3959.6 2670.8 2920.7 3112.5 4063.4 3939 3579.9 4304.8 5466.8 4085.7 5161.3 5278.6 4128.7 4385.7 4705 3823.9 4707.6 5181.1 3774.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17740000 5168 3630 4900 9694;9695 7847 7847 1 9606 Homo sapiens -0.10499044998277896 DVLILGGGDGGILCEIVK Unmodified 1826.9812 0.9811854 3636 P52788;B4DE40;P52788-2;H7C2R7 SMS Spermine synthase yes no 0 0 0 7 0 1 64.702 64.729 3 8.7802E-24 19980 20230619_1887_Aki_TMTPro18x_K_F7 199.65 155.66 76844 61074 69088 77075 55239 57457 66740 64968 63781 89129 96627 81998 93509 90867 89838 99434 92639 98784 70983 56053 70654 76274 58754 59788 66597 66536 66535 88528 97368 83931 95417 93853 91630 99730 88652 93810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 365680000 5169 3636 4901 9696 7848 7848 1 9606 Homo sapiens 0.10077405311722032 DVLIPGK Unmodified 740.44324 0.44324019 1425 A0A8I5KU76;A0A384MEE7;Q9BS26;A0A8I5KW59 ERP44 Endoplasmic reticulum resident protein 44 yes no 0 0 0 6.5 0.5 1 1 50.667 50.746 2 0.038034 13907 20230619_1887_Aki_TMTPro18x_K_F7 97.068 20.221 336640 253880 281630 299150 370980 457570 382440 338360 516580 381230 381660 431020 412980 348850 419690 459200 443230 449220 310710 232900 292210 300390 379330 447820 388740 355080 512960 384930 399700 432450 420910 368340 428170 459010 423890 426750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 389220000 5170 1425 4902 9697;9698 7849 7849 1 9606 Homo sapiens 0.06263629811337523 DVLLQVDDERR Unmodified 1356.6997 0.69974224 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 1 2 0.816 1 1 1 44.728 44.779 3 1.0098E-17 12010 20230619_1881_Aki_TMTPro18x_K_F2 244 209.5 212570 166010 194250 221390 230520 246680 258890 247330 329190 296730 306760 300760 324870 253380 284920 297220 314960 304730 196360 152460 199580 219310 237410 247530 261450 253950 330420 297430 316500 303510 328950 265380 292140 298380 300990 289390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 932880000 5171 148 4903 9699;9700;9701 7850;7851 7851 2 9606 Homo sapiens 0.035660357869574 DVLLTELSNCTVR Unmodified 1518.7712 0.77119262 3943 Q15814 TBCC Tubulin-specific chaperone C yes yes 0 0 0 6 0 1 60.209 60.267 3 4.1501E-16 18217 20230619_1886_Aki_TMTPro18x_K_F6 167.3 155.13 22197 17298 23767 23411 25723 25866 26488 27255 31874 25494 23177 24207 26769 23932 28003 27211 29780 31148 20531 15889 24037 23175 26566 26003 26828 27695 31815 25833 24363 24625 27281 24874 28547 27515 28486 29538 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95944000 5172 3943 4904 9702 7852 7852 1 9606 Homo sapiens 0.03255787429316115 DVLNDTAPR Unmodified 999.49852 0.49852324 2024;1277 A0A1B0GVU9;Q9H3A5;Q9BUZ3;B4DDN1;Q96AW5;H7C0R3;Q53HS0;A8K3A8;P47897-2;P47897;B4DNN3 QARS Glutamine--tRNA ligase no no 0 0 0 2 0 1 39.9 39.97 2 4.3898E-06 9791 20230619_1881_Aki_TMTPro18x_K_F2 205.12 165.07 120260 94731 112310 99706 134710 148990 128480 131640 176810 151090 167020 170940 164320 136030 136910 184230 193400 167760 111110 86798 115010 101000 138100 146560 131400 136130 176930 152320 171680 171490 166540 143990 143070 183290 184320 159610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108460000 5173 1277;2024 4905 9703 7853 7853 1 9606 Homo sapiens -0.001246084588501617 DVLPNNR Unmodified 826.42972 0.42971539 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 4 0 1 36.009 36.054 2 0.026046 7961 20230619_1883_Aki_TMTPro18x_K_F4 97.071 77.594 76781 47968 75288 73737 94744 99655 82253 78467 104230 77881 96659 99930 100220 75552 84527 54831 109570 91968 70881 44169 76875 72647 96538 98296 84333 81624 104560 79474 99685 99527 101370 77734 87428 57622 104480 87023 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193300000 5174 1552 4906 9704 7854 7854 1 9606 Homo sapiens 0.009557720320913177 DVLQAETSQQLCCQK Unmodified 1806.824 0.82403283 2117 A8K885;Q9UNH7;A0A0A0MRI2;B4DJS7;Q9UNH7-2;Q5QTQ6 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 5 0.816 1 1 1 49.927 49.99 3 8.282599999999999E-19 13731 20230619_1885_Aki_TMTPro18x_K_F5 202.25 167.43 258750 197510 224050 253620 249020 279440 265830 268070 313410 310270 322770 331340 370610 282170 274100 362980 390190 348770 238900 181330 231050 251820 257310 280320 268540 275770 317060 311950 332760 333800 372030 297080 287290 362400 371930 331570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290470000 5175 2117 4907 9705;9706;9707 7855;7856 7856 2 9606 Homo sapiens -0.047106225701327276 DVLSVAFSSDNR Unmodified 1308.631 0.63099397 2907 P63244;E9KL35;J3KPE3;H0Y8W2;H0YAF8;H0YAM7;D6RHH4;D6R9L0;D6R9Z1;D6RFX4;B4DVD2;D6RFZ9;E9PD14;D6RAU2 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 5.33 1.11 2 1 2 1 56.126 56.173 2;3 4.4069E-40 16504 20230619_1886_Aki_TMTPro18x_K_F6 347.98 328.71 354930 296730 308730 350090 321210 366760 358140 360890 431410 387240 366000 340520 390460 324930 367900 398730 383020 380990 327880 272100 317910 349420 333960 369500 361210 369790 432740 388640 379520 347400 396650 339660 375510 398440 366320 362060 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2803100000 5176 2907 4908 9708;9709;9710;9711;9712;9713 7857;7858;7859 7859 3 9606 Homo sapiens -0.010976285126844232 DVLTAHPAAPGPVSR Unmodified 1486.7892 0.78922595 1255 O94901-9;A0A146IHP0;E9PHI4;A7MCZ7;O94901;O94901-5;H0Y742;A4D2Q0;H7C3X3;O94901-3;O94901-7;O94901-2 SUN1;UNC84A SUN domain-containing protein 1 yes no 0 0 0 7 0 1 40.595 40.662 3 1.6331E-06 9519 20230619_1887_Aki_TMTPro18x_K_F7 130.03 116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5177 1255 4909 9714 7860 7860 1 9606 Homo sapiens 0.06530290466344013 DVLVGADSVR Unmodified 1029.5455 0.54547343 538 K7EJ35;A0A024R8T9;O43760;O43760-2 SYNGR2 Synaptogyrin;Synaptogyrin-2 yes no 0 0 0 3 0 1 45.308 45.384 2 0.0059811 12006 20230619_1882_Aki_TMTPro18x_K_F3 87.258 56.461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5178 538 4910 9715 7861 7861 1 9606 Homo sapiens 0.03188251092274186 DVLVLLHK Unmodified 935.5804 0.58040237 3274 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 yes yes 0 0 0 2 0 1 56.438 56.456 3 0.022159 17174 20230619_1881_Aki_TMTPro18x_K_F2 72.547 39.707 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5179 3274 4911 9716 7862 7862 1 9606 Homo sapiens 0.11003538690897585 DVMDALILK Unmodified 1016.5576 0.55761802 4224 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 6 0 1 62.839 62.887 3 0.038271 19438 20230619_1886_Aki_TMTPro18x_K_F6 46.158 16.685 26952 23427 25827 24736 22886 29508 26236 28458 33642 29671 25743 27442 26860 23528 24537 32200 25982 28824 24923 21457 26282 24953 24143 29451 26496 29165 33539 29860 26843 27826 27277 24852 25116 32006 24866 27402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31129000 5180 4224 4912 9717 7863 7863 1 9606 Homo sapiens 0.05000151511126205 DVMPEVNK Oxidation (M) 946.44298 0.44298219 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;B4DVJ0;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;A0A0J9YXP8;K7ERC6;K7EPY4;K7EP41 GPI Glucose-6-phosphate isomerase yes no 0 1 0 3 0 1 40.713 40.772 2 0.011359 9946 20230619_1882_Aki_TMTPro18x_K_F3 93.561 51.332 46362 26608 48102 48344 64566 95866 48510 67259 87304 43037 59362 74070 59728 64876 57019 50904 91815 95878 42803 24567 48990 47594 65611 92549 51066 69962 85477 45852 62323 73435 60974 66474 59909 53911 87540 90573 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19583000 5181 1326 4913 9718 7864 7864 829 1 9606 Homo sapiens -0.0323815797082716 DVMPEVNK Unmodified 930.44807 0.44806757 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;B4DVJ0;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;A0A0J9YXP8;K7ERC6;K7EPY4;K7EP41 GPI Glucose-6-phosphate isomerase yes no 0 0 0 4 0 1 46.958 47 2 2.0901E-05 12607 20230619_1883_Aki_TMTPro18x_K_F4 150.05 98.326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5182 1326 4913 9719 7865 7865 1 9606 Homo sapiens -0.019938541082183292 DVMQQQLAEYQELLDVK Unmodified 2049.0089 0.0088567119 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 0 0 4.5 1.12 1 1 1 1 64.381 64.414 3 1.9857E-07 19917 20230619_1885_Aki_TMTPro18x_K_F5 120.24 100.92 72728 36425 67376 68150 51098 57256 64520 59144 68759 69528 71573 75284 88338 71517 74728 91516 79945 91716 67045 33672 68642 66037 54741 58723 64434 60617 69941 69890 74061 76066 88955 74970 76613 91601 76522 87067 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 321270000 5183 1473 4914 9720;9721;9722;9723 7866;7867 7867 2 9606 Homo sapiens 0.026312637812679895 DVMSDETNNEETESPSQEFVNITK Oxidation (M) 2758.1763 0.17632856 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 1 0 1.5 0.5 1 1 56.085 56.094 3 3.4801000000000005E-27 16889 20230619_1880_Aki_TMTPro18x_K_F1 191.73 185.5 49797 37355 41718 48581 47220 43595 43254 44629 42971 51048 55035 58973 57284 46564 56973 65715 55342 64459 45960 34303 43156 48067 48452 44510 43863 45710 44321 51457 56036 59100 58354 49456 57903 65630 53030 61203 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 79275000 5184 630 4915 9724;9725 7868;7869;7870 7868 362 3 9606 Homo sapiens -0.13243254783901648 DVMSDETNNEETESPSQEFVNITK Unmodified 2742.1814 0.18141394 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 2 0.756 2 3 2 59.327 59.341 3;4 2.8158E-44 18131 20230619_1882_Aki_TMTPro18x_K_F3 230.77 224.12 25641 19267 23716 25947 18999 25238 20365 22579 28143 29589 28595 32168 32741 26783 32408 32075 29600 37432 23682 17699 24194 25639 20199 25501 20714 23440 28266 29606 29527 32339 33255 28099 32807 32448 28402 35468 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 255530000 5185 630 4915 9726;9727;9728;9729;9730;9731;9732 7871;7872;7873 7873 3 9606 Homo sapiens -0.11998950921315554 DVNAAIATIK Unmodified 1014.571 0.5709599 2408;4144 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;P0DPH7-2;Q6PEY2;Q8N532 TUBA1B;TUBA1A;TUBA1C;TUBA2;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-3E chain no no 0 0 0 7.2 0.748 1 2 2 53.644 53.715 2;3 2.7342E-09 15202 20230619_1888_Aki_TMTPro18x_K_F8 226.2 130.17 3161700 2665800 2802300 2987500 2780200 3195100 3011300 2953800 3482000 3725300 4376100 4646600 4096900 3793800 3386900 4450300 4547800 4686400 2921300 2443200 2877300 2994100 2898200 3210300 3038600 3055800 3556400 3751100 4436300 4646000 4159200 3974300 3526600 4471800 4341100 4448100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127520000000 5186 2408;4144 4916 9733;9734;9735;9736;9737 7874;7875 7875 2 9606 Homo sapiens 0.06425725614724342 DVNCPFK Unmodified 878.39564 0.39563807 4012 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 C14orf166 UPF0568 protein C14orf166 yes no 0 0 0 6 0 1 45.231 45.32 2 0.01504 11804 20230619_1886_Aki_TMTPro18x_K_F6 111.82 82.006 472600 408030 517230 471310 623430 603980 622240 550090 610160 585260 627310 514070 570850 457460 676240 643770 619630 544800 437490 374040 522980 472720 638140 599750 626990 566660 622980 587510 639910 523800 589150 483660 682470 638530 592880 518770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 382230000 5187 4012 4917 9738 7876 7876 1 9606 Homo sapiens -0.04842392451166688 DVNFEFPEFQL Unmodified 1383.6347 0.63468237 3703 P62081 RPS7 40S ribosomal protein S7 yes yes 0 0 0 3.5 1.71 1 1 1 1 1 1 67.206 67.23 2 3.5688E-05 21038 20230619_1885_Aki_TMTPro18x_K_F5 172.94 158.73 195380 161610 177480 194300 166130 179510 180380 203980 203300 209070 211250 191850 204220 165890 176080 237410 209610 196850 180540 148230 181690 193400 173880 183240 181890 206780 206190 210420 215900 194820 207280 175750 181740 234970 200140 187450 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 595720000 5188 3703 4918 9739;9740;9741;9742;9743;9744 7877;7878;7879;7880;7881 7880 5 9606 Homo sapiens -0.041789587388393556 DVNLASCAADGSVK Unmodified 1405.6507 0.65074314 2249 Q6IAP9;Q5T1M7;B2R7V4;Q59EL4;O43172-2;O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes no 0 0 0 5 0 1 48.118 48.195 3 1.6798E-06 12964 20230619_1885_Aki_TMTPro18x_K_F5 121.13 106.97 46643 42988 39810 42544 45735 46388 47348 47362 56725 45893 46193 42243 46239 43275 49569 49251 46763 46636 43112 39346 41109 43083 47077 46675 47928 48274 56814 46375 47879 43111 47376 44905 50190 49258 44769 44324 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98920000 5189 2249 4919 9745 7882 7882 1 9606 Homo sapiens -0.035856205642858185 DVNQQEFVR Unmodified 1133.5465 0.54653606 2186 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QYF7;M0R140 RPS19 40S ribosomal protein S19 yes no 0 0 0 3 0.816 1 1 1 40.486 40.544 2 0.00037491 9825 20230619_1882_Aki_TMTPro18x_K_F3 138.06 108.98 1757600 1401200 1415800 1679100 1780300 1970400 1834100 1746900 2326100 2108500 2262300 2130700 2220700 1874200 1784000 2480100 2329100 2268900 1622300 1285300 1473800 1676300 1823500 1965400 1860700 1809900 2338800 2113000 2320700 2154500 2247400 1973500 1855700 2468700 2222700 2157400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4580500000 5190 2186 4920 9746;9747;9748 7883;7884 7883 2 9606 Homo sapiens -0.014895345388140413 DVNVNFEK Unmodified 963.46616 0.46616048 647 A0A024RB32;Q15185-4;Q15185;A0A087WYT3;B3KUY2;Q15185-3;B4DDC6;Q15185-2 PTGES3 Prostaglandin E synthase 3 yes no 0 0 0 5 0.816 2 2 2 48.761 48.825 2;3 0.0010685 13404 20230619_1883_Aki_TMTPro18x_K_F4 149.72 84.468 1743100 1346200 1408500 1477100 1617600 1819000 1625000 1572400 2179800 1945400 2038000 2076600 2270000 1740100 1672000 2454300 2341800 2013000 1608600 1234000 1462100 1485800 1666000 1808200 1654900 1633400 2183400 1951000 2107200 2091500 2280400 1843800 1751900 2427900 2231900 1917900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3794699999.9999995 5191 647 4921 9749;9750;9751;9752;9753;9754 7885;7886 7885 2 9606 Homo sapiens -0.017033958618526412 DVPAYSQDTFK Unmodified 1269.5877 0.58773217 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 5 0.816 1 1 1 49.916 49.978 2 7.5991E-10 13953 20230619_1883_Aki_TMTPro18x_K_F4 225.22 175.18 188210 153840 171930 192440 205090 231160 219590 217960 278860 244850 255610 263510 269800 221590 252000 281980 258820 278980 173910 141170 176660 191660 210950 230490 222340 224280 279730 246660 264020 265270 274010 233170 257120 282140 247710 264930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 208930000 5192 3384 4922 9755;9756;9757 7887;7888;7889 7887 3 9606 Homo sapiens -0.03627818290033247 DVPEEQEHMR Oxidation (M) 1284.5405 0.54046441 377 Q6NUM7;A0A024R640;Q9NUQ2;H0YC22 AGPAT5 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon yes no 0 1 0 1 0 1 28.235 28.235 3 1.9677E-05 5264 20230619_1880_Aki_TMTPro18x_K_F1 143.5 120.94 4924.7 3327.4 2901.8 5479.3 6802.7 5997.9 5169.2 5825.2 8752.4 3814.7 5811 5556.5 5048.2 5996.6 6226 5172.6 5832.3 4664.3 4533.3 3065.5 3188.4 5355.7 6714.3 6021.9 5411.6 5909.3 8577.6 4028 6066.5 5581.9 5245.1 6116.9 6282.3 5188.6 5576 4439.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34628000 5193 377 4923 9758 7890 7890 231 1 9606 Homo sapiens -0.09042420832656717 DVPEEQEHMR Unmodified 1268.5455 0.54554978 377 Q6NUM7;A0A024R640;Q9NUQ2;H0YC22 AGPAT5 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon yes no 0 0 0 1 0 1 32.068 32.068 3 6.2019E-20 6794 20230619_1880_Aki_TMTPro18x_K_F1 232.88 196.36 14667 10021 17030 14612 20520 23883 20946 20439 27601 16809 21250 19615 19167 16888 21110 17082 21012 18783 13566 9218 17146 14499 21062 23355 21291 21014 27445 17293 22003 19702 19726 17519 21402 17274 20090 17830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31382000 5194 377 4923 9759 7891 7891 1 9606 Homo sapiens -0.07798116970025148 DVPEEQEHMRR Unmodified 1424.6467 0.64666081 377 Q6NUM7;A0A024R640;Q9NUQ2;H0YC22 AGPAT5 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon yes no 0 0 1 1.5 0.5 1 1 28.685 28.723 4 0.00039898 5227 20230619_1881_Aki_TMTPro18x_K_F2 87.298 64.578 6741.1 7615.6 8372.8 7862.6 9777.1 12112 9945 9270.7 9522.8 6594.7 7216.1 10746 9071.9 8312.9 12589 7649.7 12746 7852.6 6260.6 6968.4 8390.5 7978.4 10051 11858 10003 9597.8 9627.5 6940.3 7629.3 10626 9374.2 8613 12718 7728.1 12160 7474.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13544000 5195 377 4924 9760;9761 7892 7892 1 9606 Homo sapiens -0.048676652673293574 DVPFFEGLEGSIDTGITVSR Unmodified 2138.0532 0.053164368 3790 Q02952-3;Q02952-2;Q02952 AKAP12 A-kinase anchor protein 12 yes no 0 0 0 5 0 1 64.714 64.758 3 0.055216 20032 20230619_1885_Aki_TMTPro18x_K_F5 40.622 25.927 18129 16884 19017 21379 17248 24125 21157 21380 24608 25818 23448 26879 26002 25701 23156 27923 24235 28231 16784 15488 19239 21252 18201 24110 21216 22151 24843 25890 24248 27184 26347 26651 23685 28030 23205 26796 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3804600 5196 3790 4925 9762 7893 7893 1 9606 Homo sapiens 0.029659911991075205 DVPGFAIGGLSGGESK Unmodified 1489.7413 0.7412727 4465 Q9BXR0;B2RAR3;K7EPI1 QTRT1 Queuine tRNA-ribosyltransferase yes no 0 0 0 7 0 1 59.119 59.169 3 0.00060415 17471 20230619_1887_Aki_TMTPro18x_K_F7 74.428 55.596 39437 41225 44082 45003 39615 41040 46654 39312 38934 49810 48579 42322 49122 38197 56170 43756 39306 41805 36565 37748 44330 45105 41626 41792 46405 40594 40537 49527 49400 43166 50396 39855 55995 43819 37788 39718 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32091000 5197 4465 4926 9763 7894 7894 1 9606 Homo sapiens 0.015991717556744334 DVPIVHTETK Unmodified 1137.603 0.60298831 3431 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;P11171-5;Q4VB87;A0A3B3ITP0;A0A2R8Y7Y3;P11171-6;B7Z5L2 EPB41 Protein 4.1 yes no 0 0 0 4 0.816 1 1 1 41.103 41.166 3 0.00057434 10090 20230619_1883_Aki_TMTPro18x_K_F4 98.04 33.666 114950 88108 129960 111010 122500 131110 108810 107860 127160 142560 186340 173100 156410 119250 155450 156700 162810 153560 106370 80875 130510 110520 127420 130550 111210 112740 130860 143100 186990 172560 160410 126790 158510 156700 155640 145920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 370030000 5198 3431 4927 9764;9765;9766 7895 7895 1 9606 Homo sapiens 0.039690932978373894 DVPLGTPLCIIVEK Unmodified 1552.8535 0.85346569 239 P10515;A0A024R3D8;Q86YI5;A0A7P0TBE2;A0A7P0TAX2;A0A7P0TAG1;B4DJX1;A0A7P0TBK2;A0A7P0T997;A0A7P0Z4G4;H0YDD4;A0A7P0TA47;B4DS43;Q16791 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial;Acetyltransferase component of pyruvate dehydrogenase complex yes no 0 0 0 8 0 1 63.333 63.356 2 5.806E-16 19231 20230619_1888_Aki_TMTPro18x_K_F8 244.18 187.62 98345 83436 87827 110910 86823 106140 109870 121790 114750 118630 108490 112570 124290 102950 105740 142270 135130 131730 90877 76600 90241 109660 90972 108000 109620 123220 116440 119830 112320 114280 125490 108600 109680 141630 128980 125240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 270970000 5199 239 4928 9767 7896 7896 1 9606 Homo sapiens 0.09915309508255632 DVPLHALYDNVEK Unmodified 1511.762 0.76200815 3409 P08243-2;P08243;P08243-3;F8WEJ5 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 4.5 0.5 1 1 52.686 52.734 3 4.6817E-06 14934 20230619_1885_Aki_TMTPro18x_K_F5 127.36 99.494 154490 129480 134790 124300 135760 165930 143950 127510 162620 119850 116980 168840 140240 107160 166790 140690 137980 181020 142720 118520 138530 126590 141350 163790 145210 132790 162720 123100 123640 166910 143570 114430 167410 143160 132590 171350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200530000 5200 3409 4929 9768;9769 7897 7897 1 9606 Homo sapiens 0.026597621353175782 DVPNHGFR Unmodified 940.45151 0.45151346 3801 Q05BQ5;K7EQ11;Q05BQ5-3 MBTD1 MBT domain-containing protein 1 yes no 0 0 0 5 0 1 31.891 31.971 3 0.0039785 6377 20230619_1885_Aki_TMTPro18x_K_F5 94.302 70.313 30709 24240 25181 28738 41697 48142 37805 37998 56792 30894 40729 43806 37374 35276 39138 33050 38472 34259 28347 22234 26317 28896 41967 46964 38896 39318 56043 32058 42418 43586 38363 36524 39694 33347 36787 32542 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24533000 5201 3801 4930 9770 7898 7898 1 9606 Homo sapiens -0.021094232193377138 DVPNNQLR Unmodified 954.48829 0.4882929 881;2415 Q96MZ5;A0A087X0Q1;Q7Z739;Q8NA80;A0A024R7W5;B4DPX9;A0A087WY31;Q658Z6;Q8N3V9;B4DT65;B3KTL8;Q9BYJ9 YTHDF3;DKFZp451J085;DKFZp451A052;YTHDF1 YTH domain-containing family protein 3;YTH domain-containing family protein 1 no no 0 0 0 3.5 0.5 1 1 34.744 34.8 2 0.0026287 7409 20230619_1883_Aki_TMTPro18x_K_F4 123.69 88.797 59272 34618 62775 69754 87065 84640 71128 75272 85399 62799 86804 89143 83916 68089 77319 46200 90317 83082 54736 32011 63866 67674 88004 84206 73098 77215 86164 64970 88879 88525 85400 69829 79273 48955 86239 78547 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69035000 5202 881;2415 4931 9771;9772 7899;7900 7900 2 9606 Homo sapiens 0.009228286065649627 DVPNPNQDDDDDEGFSFNPLK Unmodified 2376.9982 0.99822826 133 A0A024R179;Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes no 0 0 0 2 0 1 61.896 61.906 3 7.9727E-08 19452 20230619_1881_Aki_TMTPro18x_K_F2 97.488 85.185 20156 14634 18878 22773 17739 22349 20899 19696 20953 21345 26496 24109 22219 21183 22287 29481 23077 27080 18615 13468 19293 22306 18621 22554 20898 20362 21553 21568 26722 24279 22829 22369 22749 29335 22100 25732 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101850000 5203 133 4932 9773 7901 7901 1 9606 Homo sapiens -0.1351909213012732 DVPNSQLR Unmodified 927.47739 0.47739386 2661 B5BU99;Q9Y5A9;Q9Y5A9-2 YTHDF2 YTH domain-containing family protein 2 yes no 0 0 0 3.5 0.5 1 1 35.448 35.505 2 1.437E-05 7731 20230619_1883_Aki_TMTPro18x_K_F4 143.61 86.507 19466 16522 22802 25840 29770 29748 26581 28812 32181 21486 28175 29710 25627 22515 30596 16701 28460 25649 18030 15197 23005 25365 30258 29757 27162 29302 32267 22370 29006 29525 26474 23159 30826 17427 27231 24277 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17121000 5204 2661 4933 9774;9775 7902;7903 7903 2 9606 Homo sapiens 0.010754262322734576 DVPSTER Unmodified 802.3821 0.38209649 2929 E9PKP7;P17480-2;P17480;A0A994J4N4;A8K962;B4DNQ1;O00164;Q05BZ1;B4DLB0 UBTF Nucleolar transcription factor 1 yes no 0 0 0 1 0 1 30.549 30.549 2 0.081343 6206 20230619_1880_Aki_TMTPro18x_K_F1 69.093 20.589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5205 2929 4934 9776 7904 7904 1 9606 Homo sapiens -0.026999269587577146 DVPVAEEVSALFAGELNPVAPK Unmodified 2251.1736 0.17361385 1855 A0A8V8TQW4;O14617-4;O14617;O14617-5;O14617-2;Q6PK82;O14617-3 AP3D1 AP-3 complex subunit delta-1 yes no 0 0 0 5 1.41 1 1 1 1 1 66.378 66.41 3 5.2218E-17 20663 20230619_1887_Aki_TMTPro18x_K_F7 153.11 136.24 37011 33617 35678 33579 29466 31056 34750 36451 37132 43287 42718 45724 46101 41796 42612 49643 42666 50483 34236 30773 36243 33920 31230 31746 34833 37046 37949 43436 43738 46170 46790 43647 43438 49789 40876 47912 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 66232000 5206 1855 4935 9777;9778;9779;9780;9781 7905;7906;7907 7907 3 9606 Homo sapiens 0.09807399192732191 DVPVYLFSR Unmodified 1094.576 0.57604528 4125 Q6PCE3 PGM2L1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 1 0 1 59.029 59.029 2 0.0004676 18108 20230619_1880_Aki_TMTPro18x_K_F1 134.77 81.056 78105 68007 70462 79992 77561 103760 87602 87475 109280 98555 87412 86584 94473 85138 87298 111790 121730 115880 72192 62352 72408 80096 80465 102700 88389 90761 109240 98699 91019 88424 95949 89286 90928 112050 116100 110050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66789000 5207 4125 4936 9782 7908 7908 1 9606 Homo sapiens 0.03254029477329823 DVQDELR Unmodified 873.41921 0.41921028 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72;B3KM27 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 1 0 1 38.949 38.949 2 0.0011505 9602 20230619_1880_Aki_TMTPro18x_K_F1 171.38 86.025 199730 162510 179800 185740 232440 234090 215360 218890 275120 188230 212290 179960 180840 152200 201120 156300 210520 165450 184530 148990 185100 186350 236780 232770 219930 223790 274100 191790 219210 182200 186550 158170 204400 157690 201020 157210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150060000 5208 128 4937 9783 7909 7909 1 9606 Homo sapiens -0.022562554130104218 DVQDSLTVSNEAQTAK Unmodified 1704.8166 0.81662249 3638 P52907;A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 yes no 0 0 0 4 0.816 1 1 1 47.774 47.839 3 4.1638E-20 13137 20230619_1882_Aki_TMTPro18x_K_F3 216.07 196.23 251150 188520 219680 230370 231970 276540 266840 256220 311320 314360 355420 319960 369670 286990 282940 386450 382600 355740 231870 173000 226070 229830 241190 275630 268410 264700 316380 314790 362840 323720 372590 302470 295310 384710 364920 338300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1466899999.9999998 5209 3638 4938 9784;9785;9786 7910;7911;7912 7910 3 9606 Homo sapiens -0.007593155745553304 DVQEIATVVVPK Unmodified 1296.7289 0.7289171 652 A0A024RB76;Q9BRT6 C12orf31;LLPH Protein LLP homolog yes no 0 0 0 6 0 1 59.071 59.136 3 0.00018011 17790 20230619_1886_Aki_TMTPro18x_K_F6 100.55 79.599 46823 44543 54560 46875 40430 49708 53900 49432 51844 48969 43356 50234 71349 55216 40152 69010 68380 63854 43399 40786 54530 47231 43474 50052 53516 50523 52627 49569 46131 51130 70445 57543 43089 68750 65122 60720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44700000 5210 652 4939 9787 7913 7913 1 9606 Homo sapiens 0.09242180083265339 DVQEIFR Unmodified 905.46068 0.46068117 724;3204 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;F6TRA5;Q59G92;A0A0A0MT12;B4DIJ6;F6S4E6;B4DIZ8;A0A140T973;A0A140T9K1;A0A140T9L4;O00148;B4DX78;O00148-2;K7EQN7;A0A024R7H0;O00148-3 DDX39B;hCG_2005638;DDX39A;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A no no 0 0 0 4 0.816 1 1 1 49.823 49.885 2 0.001683 13909 20230619_1883_Aki_TMTPro18x_K_F4 166.86 108.28 1851000 1699700 1643000 2009800 2001200 2329400 2063700 1943400 2386400 2156300 2280000 2135800 2270100 1951400 2181100 2287500 2296300 2401900 1711300 1558100 1694200 2007800 2053800 2322400 2086600 2018300 2408200 2168200 2343100 2163600 2313200 2037000 2226500 2299500 2196700 2279800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3151399999.9999995 5211 724;3204 4940 9788;9789;9790 7914;7915 7915 2 9606 Homo sapiens 0.004169253463260247 DVQELLTQYTK Unmodified 1336.6874 0.68744622 1672 A0A7P0PJI2;A0A7I2V5K0;P61011;G3V4F7;B4DDS7;P61011-2 SRP54 Signal recognition particle 54 kDa protein yes no 0 0 0 6.5 0.5 1 1 61.754 61.801 3 5.191E-09 18574 20230619_1887_Aki_TMTPro18x_K_F7 174.42 146.25 229140 186640 236200 247720 214220 246400 249190 243790 234200 282810 274700 247450 299570 240460 255760 325290 285840 318490 211930 171370 239100 245120 225150 249160 248890 250310 241320 282550 280840 252780 302770 252870 262900 324910 273420 302450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 263890000 5212 1672 4941 9791;9792 7916 7916 1 9606 Homo sapiens 0.03256999323934906 DVQEQLSR Unmodified 973.48287 0.48287317 1340 A0A2P9DU05;A0A8V8TL82;O75116;E9PF63;A0A8V8TL90;Q14DU5;B4DRJ9 ROCK2 Rho-associated protein kinase 2 yes no 0 0 0 2.5 0.5 1 1 36.712 36.768 2 0.0024491 8397 20230619_1881_Aki_TMTPro18x_K_F2 139.74 96.87 38541 24311 33786 34411 41302 42396 37990 41401 51603 47642 56891 51611 59752 41879 41194 42846 59052 52115 35551 22363 34826 34021 42229 42240 38930 42511 51998 47940 58176 51884 59957 43628 43204 43559 56280 49426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68764000 5213 1340 4942 9793;9794 7917 7917 1 9606 Homo sapiens -0.004928949759005263 DVQFEHGYR Unmodified 1149.5203 0.52032131 7 B4DKC1;A0A0C4DFM1;A0A024QYR3;Q92544;B4DH88;B4DYH6 TM9SF4 Transmembrane 9 superfamily member 4 yes no 0 0 0 3.5 0.5 1 1 36.578 36.628 3 1.5601E-08 8220 20230619_1882_Aki_TMTPro18x_K_F3 177.78 151.66 59976 45273 55348 58480 63548 69597 66453 65450 82409 71192 96030 91114 91329 71341 73349 79268 100900 97187 55396 41569 56754 58114 65466 69434 67333 67310 83514 72264 97613 90947 92477 74706 76451 80516 96250 92132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142310000 5214 7 4943 9795;9796 7918 7918 1 9606 Homo sapiens -0.04845803710304608 DVQGTDASLDEELDR Unmodified 1661.738 0.73803782 4673 Q9UJZ1;A0A087WYB4;Q9UJZ1-2 STOML2 Stomatin-like protein 2, mitochondrial yes no 0 0 0 1 0 1 48.501 48.501 2 9.737599999999999E-19 13744 20230619_1880_Aki_TMTPro18x_K_F1 213.18 172.59 27153 19087 25849 35400 27836 35741 31808 29192 41317 34926 37023 46313 44022 39707 36644 37815 40012 49240 25075 17611 26463 34365 28920 35928 32122 30457 41368 35360 38552 46231 44373 41076 37586 38671 38315 46614 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28633000 5215 4673 4944 9797 7919 7919 1 9606 Homo sapiens -0.06636167879651111 DVQGTDASLDEELDRVK Unmodified 1888.9014 0.90141475 4673 Q9UJZ1;A0A087WYB4;Q9UJZ1-2 STOML2 Stomatin-like protein 2, mitochondrial yes no 0 0 1 3 0 1 52.608 52.667 3 3.7173E-30 15314 20230619_1882_Aki_TMTPro18x_K_F3 233.38 209.1 119530 106010 112910 129300 118330 130750 140550 135460 136030 140430 138440 131480 162160 124880 144550 169010 149900 158920 110530 97226 115450 128690 123050 132220 140280 138220 139000 141370 142940 133760 163820 131430 147730 168490 143440 151010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 399550000 5216 4673 4945 9798 7920 7920 1 9606 Homo sapiens -0.00747989828619211 DVQGWGENDR Unmodified 1174.5003 0.50031415 3705;3704 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;B4DJ75;B7ZB67;P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;E9PMD7;B3KXM2;P62136-3 HEL-S-80p;PPP1CB;PPP1CA Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit no no 0 0 0 2 0 1 41.048 41.125 2 1.0259E-06 10315 20230619_1881_Aki_TMTPro18x_K_F2 157.78 141.63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5217 3705;3704 4946 9799 7921 7921 1 9606 Homo sapiens -0.07995599440914702 DVQIGDIVTVGECRPLSK Unmodified 1985.0252 0.025175478 3713 P62280;M0R1H5 RPS11 40S ribosomal protein S11 yes no 0 0 1 7.5 0.5 2 2 56.899 56.953 3;4 1.2346E-18 16540 20230619_1888_Aki_TMTPro18x_K_F8 180.41 158.93 1421700 1232700 1203200 1554900 1234100 1291400 1433100 1494300 1314900 1529200 966940 1212800 1722400 1747500 779300 2429400 910430 1693200 1313500 1131000 1243000 1540100 1284100 1330800 1429900 1513600 1335500 1533900 1042400 1265200 1691300 1818900 825900 2384100 875250 1613200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 19196000000 5218 3713 4947 9800;9801;9802;9803 7922;7923;7924 7924 3 9606 Homo sapiens 0.07206389738007601 DVQLHLER Unmodified 1008.5352 0.53524309 1742 A0A8I5KP17;A0A8I5KWX5;A0A8I5KYJ9;A0A8I5KYW6;A0A8I5KXE7;A0A8I5QKX2;A0A8I5KU09;A0A804HLG9;A0A8I5KTB6;Q16514-2;Q16514 TAF12 Transcription initiation factor TFIID subunit 12 yes no 0 0 0 3 0 1 39.352 39.406 3 0.0029639 9325 20230619_1882_Aki_TMTPro18x_K_F3 88.177 27.285 47039 36564 38737 42155 44538 49333 43825 45853 55436 46255 51022 51149 49717 46345 49651 55565 58672 50579 43419 33531 40146 42213 45826 49268 44592 47089 55615 46897 52504 51560 50822 48420 51017 55400 55994 48123 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49272000 5219 1742 4948 9804 7925 7925 1 9606 Homo sapiens 0.03131688157714052 DVQMLQDAISK Oxidation (M) 1262.6177 0.61765209 437 A0A024R7B7;Q16543;K7EQA9;A1L0W4;K7EIU0;K7EL68 CDC37;MBD5 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 1 0 6 0 1 53.213 53.29 3 0.00024197 15277 20230619_1886_Aki_TMTPro18x_K_F6 101.39 76.832 77693 67654 68180 76702 75203 86228 83845 76288 94460 67017 77802 68909 71849 62357 72456 75201 78068 76283 71797 62006 70217 76846 77845 86250 84334 78409 94857 68349 80300 69711 73569 65216 73992 75420 74628 72449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202050000 5220 437 4949 9805 7926 7926 269 1 9606 Homo sapiens -0.0031520261634341296 DVQMLQDAISK Unmodified 1246.6227 0.62273747 437 A0A024R7B7;Q16543;K7EQA9;A1L0W4;K7EIU0;K7EL68 CDC37;MBD5 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 0 0 7 0 1 58.626 58.675 3 0.01449 17260 20230619_1887_Aki_TMTPro18x_K_F7 64.65 11.958 190080 149210 160190 179720 153210 214000 199730 187010 204840 240050 221790 190590 262080 220440 201850 257040 238530 284570 175490 136890 165300 179410 161340 213070 198830 194320 209290 238280 228270 196880 263330 228490 208660 259070 228190 269830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1399800000 5221 437 4949 9806 7927 7927 1 9606 Homo sapiens 0.009291012462881554 DVQNFPAATDEK Unmodified 1333.615 0.61500956 1901 A0RZB8;Q6URC4;O60610-2;O60610-3;O60610;A0A1E1ERW3;A0A2R8Y5N1;Q7KZJ7;Q96IL1;B4DVR3 DIAPH1 Protein diaphanous homolog 1 yes no 0 0 0 3 0 1 46.922 47.001 3 0.0119 12770 20230619_1882_Aki_TMTPro18x_K_F3 62.908 43.584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5222 1901 4950 9807 7928 7928 1 9606 Homo sapiens -0.03845334749621543 DVQTALALAK Unmodified 1028.5866 0.58660996 1085 A0A0S2Z410;Q99714;A0A804HHW5;Q99714-2;Q5H928;A0A0S2Z434 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 7.5 0.5 1 1 55.955 56.015 3 0.00028768 16137 20230619_1888_Aki_TMTPro18x_K_F8 113.69 72.257 130460 103190 124180 145470 160920 173750 178170 174490 200160 174010 195060 204850 193390 173750 195620 191590 171110 192180 120560 94823 127380 143750 164680 173530 179260 178190 202370 176850 200400 205490 197560 181120 197520 192320 164100 182450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 354040000 5223 1085 4951 9808;9809 7929;7930 7930 2 9606 Homo sapiens 0.07346012131756652 DVQTYYGQVLK Unmodified 1312.6663 0.66631685 4546 Q9HBK9-2;Q9HBK9 AS3MT Arsenite methyltransferase yes no 0 0 0 8 0 1 54.132 54.203 2 0.037312 15369 20230619_1888_Aki_TMTPro18x_K_F8 80.688 61.908 15365 13341 14807 17756 13219 18981 15132 14932 15659 18507 18315 17243 20285 18068 16511 26261 23666 25020 14209 12247 15086 17575 13942 18995 15171 15635 16045 18476 18743 17613 20475 19041 17306 26155 22583 23773 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23672000 5224 4546 4952 9810 7931 7931 1 9606 Homo sapiens 0.022490340150852717 DVSDQIGNEEQVEDTFQK Unmodified 2079.9233 0.92327241 4594 Q9NU22;Q6AI22;Q6PJJ1 MDN1;DKFZp686H16106 Midasin yes no 0 0 0 1 0 1 55.336 55.336 3 0.0028559 16578 20230619_1880_Aki_TMTPro18x_K_F1 69.522 60.238 13776 11338 14087 15914 11544 15626 14371 13151 18941 12971 13545 17625 16351 13181 13795 16490 14578 15894 12741 10416 14261 15683 12297 15755 14465 13615 18804 13273 14300 17521 16475 13915 14131 16478 13950 15098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59195000 5225 4594 4953 9811 7932 7932 1 9606 Homo sapiens -0.07349229870715135 DVSELTGFPEMLGGR Oxidation (M) 1622.761 0.76102187 3534 V9HWH7;P31939;B2R7P8;P31939-2;F8WEF0 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes no 0 1 0 4 0 1 59.882 59.884 2 0.0010872 18281 20230619_1883_Aki_TMTPro18x_K_F4 88.134 72.472 17912 18691 17836 18097 19590 20131 19952 23728 20324 20106 24941 23940 23892 22276 25480 24124 25475 28875 16591 17098 18151 18371 20204 20298 20125 23882 20863 20622 25327 24088 24503 23127 25875 24483 24398 27363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87483000 5226 3534 4954 9812 7933 7933 2198 1 9606 Homo sapiens -0.025448202959296395 DVSELTGFPEMLGGR Unmodified 1606.7661 0.76610724 3534 V9HWH7;P31939;B2R7P8;P31939-2;F8WEF0 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes no 0 0 0 5 0.816 1 1 1 62.856 62.882 3 1.6722E-33 19228 20230619_1885_Aki_TMTPro18x_K_F5 209.11 153.02 60271 50861 62857 65313 49020 61377 66238 60426 64555 70076 78529 68330 75283 73728 77973 86002 72119 83386 55762 46677 63455 64722 52503 62325 65761 62090 66416 70256 79724 69703 77114 76481 78970 86062 69137 79186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 470640000 5227 3534 4954 9813;9814;9815 7934;7935 7934 2 9606 Homo sapiens -0.013005164332980712 DVSGPMPDSYSPR Oxidation (M) 1422.6085 0.60854397 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;A0A140T954 VARS Valine--tRNA ligase yes no 0 1 0 3.5 0.5 1 1 39.876 39.932 2 8.5798E-05 9507 20230619_1882_Aki_TMTPro18x_K_F3 115.89 89.372 41518 31216 38171 41210 38427 40720 38529 37303 46129 55551 63223 46847 59374 41289 48033 60457 51572 52904 38345 28669 39069 40782 39903 41143 39100 38838 47272 54888 63761 47833 60104 43830 49310 59983 49319 50323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50399000 5228 725 4955 9816;9817 7936;7937 7936 436 2 9606 Homo sapiens -0.08585595972658666 DVSGPMPDSYSPR Unmodified 1406.6136 0.61362935 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;A0A140T954 VARS Valine--tRNA ligase yes no 0 0 0 3.5 0.5 1 1 44.441 44.499 2 1.0105E-56 11489 20230619_1883_Aki_TMTPro18x_K_F4 334.13 303.34 185320 155310 178550 185060 160570 203340 197590 182030 229080 295430 296610 287660 321270 257460 258210 336900 328430 338740 171340 142430 181750 184700 169450 203720 198100 190490 234570 292190 302090 291400 324030 270880 267990 337130 313630 321680 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 175790000 5229 725 4955 9818;9819 7938;7939;7940 7939 3 9606 Homo sapiens -0.07341292110049835 DVSHEIIQHEVK Unmodified 1432.731 0.73104237 1366 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 0 0 0 4 0 1 41.05 41.092 4 5.7273E-05 10033 20230619_1883_Aki_TMTPro18x_K_F4 119.25 97.696 87636 73009 77951 78596 101340 111220 95111 100820 174990 103910 116170 107190 127160 96985 106860 104950 125690 114470 80970 66894 80347 79373 103430 109770 98657 103740 171170 105140 122330 108360 128430 100870 110040 105880 120000 108660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85720000 5230 1366 4956 9820 7941 7941 1 9606 Homo sapiens 0.03198608821048765 DVTEAEQAEEQAR Unmodified 1474.6536 0.65357991 3820 Q12788;A0JLS5;J3KNP2 TBL3 Transducin beta-like protein 3 yes no 0 0 0 1 0 1 40.266 40.266 2 0.00020319 10210 20230619_1880_Aki_TMTPro18x_K_F1 110.44 96.445 28518 17268 20921 31944 30536 48518 31809 33319 45050 30708 43432 70259 56991 53935 38539 50211 71660 81367 26268 15943 22118 31210 31154 47384 32392 35034 45027 32416 45389 68897 56935 55968 41404 52221 68311 76917 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39275000 5231 3820 4957 9821 7942 7942 1 9606 Homo sapiens -0.06476073905764679 DVTGAEALLER Unmodified 1172.6037 0.60371659 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 53.109 53.155 2 1.3032E-06 15544 20230619_1882_Aki_TMTPro18x_K_F3 167.09 104.43 608000 491580 519800 594790 566510 650570 665410 677280 821100 720490 705510 720410 807250 646760 740270 797350 745600 830440 561480 450950 536620 592970 588020 654190 669840 691120 822950 726010 733880 728930 817220 677840 754570 800530 713920 788090 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1347900000 5232 1022;3868 4958 9822;9823 7943;7944;7945 7945 3 9606 Homo sapiens 0.02431887946909228 DVTLENR Unmodified 845.4243 0.42429566 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 0 1.5 0.5 1 1 36.509 36.538 2 0.020943 8347 20230619_1881_Aki_TMTPro18x_K_F2 103.91 55.733 53680 40944 58182 65164 73784 87357 62889 63622 78322 58238 79485 92624 87070 69720 84709 51902 104650 108330 49650 37685 59008 64042 75174 86054 64531 66513 78894 60241 81927 91603 88498 71821 87087 55701 99959 102280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 348820000 5233 3609 4959 9824;9825 7946 7946 1 9606 Homo sapiens -0.0045995155037417135 DVTNNVHYENYR Unmodified 1522.6801 0.68006943 1949 Q8TC62;E7EPK1;A4GYY8;Q3LIE9;Q16181;Q16181-2;E7ES33;B4DUD6;B4DNE4;A8K3D0;A0A024RA87;A0A023T695;G3V1Q4;B4DPQ6;Q59EY4 SEPT7;DKFZp686F17268;Nbla02942 Septin-7 yes no 0 0 0 3.5 0.5 1 1 37.353 37.402 3 1.5975000000000002E-41 8473 20230619_1883_Aki_TMTPro18x_K_F4 273.3 254.84 185110 150940 192410 188570 240030 256910 244280 234250 293090 264390 300370 281680 290240 264600 251940 287080 297360 271570 171220 138500 195560 188250 245630 254090 247510 241630 296010 266220 307210 284680 294870 274570 259560 287210 283900 258200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1149600000 5234 1949 4960 9826;9827 7947;7948 7948 2 9606 Homo sapiens -0.06036340223749903 DVVEPLLRPQWYVR Unmodified 1768.9624 0.96243929 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32 VARS Valine--tRNA ligase yes no 0 0 1 2.5 0.5 1 1 59.095 59.116 3 2.8966E-17 18219 20230619_1881_Aki_TMTPro18x_K_F2 216.88 190.74 290370 246720 280030 290230 250620 316250 279200 297160 371370 404240 352320 356560 409580 339160 344370 443390 390040 416180 268480 226220 284970 289920 263920 317350 282830 307660 372710 401360 364850 363550 413090 356010 354400 442070 372920 395480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 258490000 5235 725 4961 9828;9829 7949;7950;7951 7949 3 9606 Homo sapiens 0.10871656522772355 DVVEQMEK Unmodified 976.45355 0.45354688 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7;H0YJZ8;G3V5G2 KTN1 Kinectin yes no 0 0 0 3 0 1 46.97 47.049 2 0.036383 12775 20230619_1882_Aki_TMTPro18x_K_F3 74.376 32.267 36151 31598 34508 45582 37277 40886 40577 49805 50532 52181 54801 56085 58168 48103 40822 67039 68900 58334 33430 29032 35300 44803 38604 41891 41055 50309 51100 52706 56153 56518 58457 50872 43506 66496 65579 55536 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24282000 5236 380 4962 9830 7952 7952 1 9606 Homo sapiens -0.03562175316403682 DVVICPDASLEDAK Unmodified 1530.7236 0.72357373 4402 V9HWC2;Q99497;K7ELW0;K7EN27 HEL-S-67p;PARK7 Protein deglycase DJ-1 yes no 0 0 0 3 0.816 1 1 1 55.429 55.454 3 9.6616E-09 16533 20230619_1882_Aki_TMTPro18x_K_F3 124.51 106.1 314590 238630 292270 305250 271010 341080 300540 305530 538840 349890 329150 410130 434060 388350 332550 521740 510550 620030 290590 219080 298540 303240 284860 341250 308530 315810 526620 353620 352540 412930 435340 408430 350850 526960 487530 587470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 549580000 5237 4402 4963 9831;9832;9833 7953;7954;7955 7954 3 9606 Homo sapiens -0.020559115615242263 DVVICPDASLEDAKK Unmodified 1658.8185 0.81853675 4402 V9HWC2;Q99497;K7ELW0;K7EN27 HEL-S-67p;PARK7 Protein deglycase DJ-1 yes no 0 0 1 3.83 1.07 1 1 2 2 52.018 52.068 3;4 2.0328E-10 15048 20230619_1882_Aki_TMTPro18x_K_F3 148.24 118.43 2131800 1695700 1914800 2175200 1882400 2140300 2279400 2149600 2325800 2622600 2512100 2527200 2807800 2199600 2457500 2962900 2546300 2710500 1969200 1556600 1964400 2156600 1969100 2167100 2276800 2208700 2376200 2621500 2581800 2559200 2838200 2320800 2512900 2949500 2436600 2576500 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 6325199999.999999 5238 4402 4964 9834;9835;9836;9837;9838;9839 7956;7957;7958;7959 7957 4 9606 Homo sapiens 0.015480219096389192 DVVMVHEPK Unmodified 1052.5325 0.5324659 1621 B0AZS5;A0A6Q8PFA6;A0A6Q8PH57;O00139-2;A0A6Q8PGH7;A0A6Q8PG37;B4DM85;O00139-1;O00139-5;O00139;O00139-4;A0A6Q8PGG1;D6R9M0 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 4 0 1 41.513 41.556 3 0.0047402 10219 20230619_1883_Aki_TMTPro18x_K_F4 61.765 37.914 88068 118030 107610 103690 93077 122760 102850 90885 106380 109770 120400 97778 103830 84649 127250 104470 116320 98194 81908 107820 107460 106230 98184 122020 103280 95600 108730 109590 122050 99427 107560 88822 128240 104400 111270 93398 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63262000 5239 1621 4965 9840 7960 7960 1 9606 Homo sapiens 0.008300967085460798 DVVNASTVEFLR Unmodified 1348.6987 0.69867961 4778 yes no 0 0 0 4 0.894 2 1 2 45.772 45.842 3 0.0068837 11995 20230619_1885_Aki_TMTPro18x_K_F5 55.401 22.172 + 993090 605260 1162400 1321000 1233300 1476800 1289700 1214800 879760 1130400 1127000 1497200 1425200 889390 1307700 1364700 1313700 1960800 918120 560310 1168900 1275500 1276200 1473900 1285000 1257700 931080 1156900 1160900 1481700 1437100 964880 1332700 1396400 1261400 1853700 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 4914700000 5240 4778 4966 9841;9842;9843;9844;9845 7961;7962 7962 2 9606 Homo sapiens 0.038278214180763825 DVVQAYPEVR Unmodified 1174.5982 0.59823728 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 3.5 0.5 1 1 44.818 44.877 2 1.865E-05 11650 20230619_1883_Aki_TMTPro18x_K_F4 161.17 124.78 316770 227980 281910 340470 334410 365640 368020 346230 431370 439920 404350 423360 457400 397460 361610 457930 454190 440740 292420 209720 290450 334710 344220 367280 370950 357610 435060 439130 418500 429530 460740 414010 375020 458000 433580 418850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1510899999.9999998 5241 3811 4967 9846;9847 7963 7963 1 9606 Homo sapiens 0.01792209155087221 DVVTAAGDMLK Unmodified 1118.5642 0.56415996 58 Q53FJ5;A0A024QZQ2;Q59EN5;P07602;P07602-2;P07602-3;B4DRB7;Q5BJH1 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes no 0 0 0 6 0 1 57.21 57.282 2 7.3237E-05 16972 20230619_1886_Aki_TMTPro18x_K_F6 161.17 129.24 103010 82512 86988 107510 83715 112170 95796 103510 142250 158770 136270 198030 181700 158230 111770 236120 208400 293700 95114 75751 89792 106530 87827 112820 97340 107830 142230 158670 142400 197790 180830 168720 120940 238790 199050 278040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150650000 5242 58 4968 9848 7964 7964 1 9606 Homo sapiens 0.009620446718372477 DVVVELK Unmodified 800.46437 0.46436956 4714 Q9Y333 LSM2 U6 snRNA-associated Sm-like protein LSm2 yes yes 0 0 0 3.5 0.5 1 1 51.874 51.921 2 0.022375 14873 20230619_1883_Aki_TMTPro18x_K_F4 101.99 23.492 537560 423170 490410 534570 557580 651860 521810 533540 759770 730000 745000 796850 884490 599030 572110 859040 878810 916060 496590 388400 503360 532090 573770 647480 535620 558440 760210 729420 771000 799120 882690 638980 605760 861270 838130 869340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 430330000 5243 4714 4969 9849;9850 7965 7965 1 9606 Homo sapiens 0.0561559512018448 DVVVQHVHFDGLGR Unmodified 1576.811 0.81102402 4742 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 6.5 0.5 1 1 45.708 45.794 4 1.0484E-16 11632 20230619_1887_Aki_TMTPro18x_K_F7 179.56 150.65 70209 55627 71199 73049 84811 96500 88922 95340 124360 68956 64676 70616 71234 59705 72020 67254 68177 76123 64915 51075 72473 72646 87205 95739 90468 96730 122150 71257 69503 71234 72549 62368 72984 67978 65323 72178 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 386270000 5244 4742 4970 9851;9852 7966;7967 7967 2 9606 Homo sapiens 0.04569095214924346 DVWGIEGPIDAAFTR Unmodified 1645.81 0.81002097 2802 CON__Q3ZBS7;B7Z553;D9ZGG2;P04004 VTN Vitronectin;Vitronectin V65 subunit;Vitronectin V10 subunit;Somatomedin-B yes no 0 0 0 5.5 0.5 2 2 63.711 63.757 2;3 6.2269000000000005E-25 19621 20230619_1885_Aki_TMTPro18x_K_F5 280.21 223.48 + 82756 86896 92433 162720 218470 289440 167540 158160 346460 513130 922940 1407300 531420 766800 1083400 555790 839040 1364600 76732 80073 95507 159340 216330 279860 177600 180560 365280 526140 906730 1363600 582630 799940 1075800 608790 808790 1285600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4677500000 5245 2802 4971 9853;9854;9855;9856 7968;7969;7970 7969 3 9606 Homo sapiens 0.01294836055376436 DVYEEFDEK Unmodified 1172.4873 0.48734943 1981 P09884;A6NMQ1;A0A7I2V2V3 POLA1 DNA polymerase alpha catalytic subunit;DNA polymerase yes no 0 0 0 2 0 1 52.806 52.839 2 0.0041589 15676 20230619_1881_Aki_TMTPro18x_K_F2 92.051 50.603 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5246 1981 4972 9857 7971 7971 1 9606 Homo sapiens -0.09199475343666563 DVYHLNR Unmodified 915.45626 0.45626449 3149;3108 J3QSH4;Q14119;Q9HD72;A8K6Y8;A0A024R1H7;A0A024R1F8;Q59HH1;A0A024R1M5;Q9HBE1-4;Q9HBE1-2;Q9HBE1-3;Q9HBE1;Q9UJ31;Q59GP8;I3L2Z5;Q8WZ46;Q8IUI2;P56270-3;P56270;P56270-2 VEZF1;ZNF278;PATZ1;A-328A3.4;MAZ Vascular endothelial zinc finger 1;POZ-, AT hook-, and zinc finger-containing protein 1;Myc-associated zinc finger protein no no 0 0 0 5 0.816 1 1 1 34.64 34.702 3 0.0015703 7412 20230619_1885_Aki_TMTPro18x_K_F5 139.92 101.68 50021 35844 49796 40703 55149 63747 57656 61168 78487 49590 58319 49216 46909 44751 57101 43584 58301 44539 46216 32877 50636 41042 56985 62641 58624 62312 77857 50787 60237 49859 48766 46228 57870 43925 55675 42344 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149430000 5247 3149;3108 4973 9858;9859;9860 7972 7972 1 9606 Homo sapiens -0.004845390765694901 DVYLSPR Unmodified 848.43922 0.43921744 3564;3963 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;B3KRG5;H3BUY5;Q96E39;Q2VIN3 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 0 0 4.5 0.5 1 1 41.803 41.867 2 0.0069009 10245 20230619_1885_Aki_TMTPro18x_K_F5 129.4 31.264 272580 203240 244000 249140 292710 342740 302120 283010 356770 242960 280830 254450 269840 227490 297830 283630 327140 261960 251690 186530 251050 249030 300730 338030 305640 292180 356930 248330 291140 257120 277150 238490 303870 282980 312270 249280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1185300000 5248 3564;3963 4974 9861;9862 7973 7973 1 9606 Homo sapiens 0.0089354031762241 DVYTGDALR Unmodified 1008.4876 0.4876242 1227 Q53FT8;A0A140VK45;P20618 PSMB1 Proteasome subunit beta type;Proteasome subunit beta type-1 yes no 0 0 0 2 0 1 42.851 42.932 2 0.08278 11174 20230619_1881_Aki_TMTPro18x_K_F2 58.083 37.181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5249 1227 4975 9863 7974 7974 1 9606 Homo sapiens -0.016280108331329757 DWDDDQND Unmodified 1021.3261 0.32609776 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C2U0 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 1 0 1 45.462 45.462 2 0.0074238 12479 20230619_1880_Aki_TMTPro18x_K_F1 107.66 107.66 88830 48785 98176 102120 112920 137590 105940 112490 132080 99184 126970 144190 140460 113040 113590 85905 167060 140380 82041 45155 99212 99088 116050 135720 108060 116290 132760 102390 131190 143150 141650 116280 118750 89919 159140 132860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153930000 5250 3621 4976 9864 7975 7975 1 9606 Homo sapiens -0.18371224656891627 DWEANACK Unmodified 992.40218 0.40218001 3806 Q06210-2;Q06210;A0A6I8PTT9 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 0 4 0 1 43.819 43.863 3 0.056119 11264 20230619_1883_Aki_TMTPro18x_K_F4 49.96 33.736 54966 46397 59185 55670 62559 65690 67328 69967 81384 61085 70348 77726 75481 69247 69381 70513 96961 85917 50868 42552 59800 55618 64818 65771 68048 70934 81606 62749 72974 77853 76658 71767 72176 71703 92429 81482 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23744000 5251 3806 4977 9865 7976 7976 1 9606 Homo sapiens -0.09432499290448959 DWEDDSDEDMSNFDR Oxidation (M) 1890.6486 0.64863046 647 A0A024RB32;Q15185-4;Q15185;A0A087WYT3;B3KUY2;B4DDC6;Q15185-2 PTGES3 Prostaglandin E synthase 3 yes no 0 1 0 1 0 1 47.909 47.909 2 3.7646E-05 13496 20230619_1880_Aki_TMTPro18x_K_F1 110.08 104.35 12346 9573.6 10543 11909 6928.7 12941 9720.4 12566 16198 16221 16984 17668 23477 20547 16973 23639 22440 23761 11398 8786.1 10819 11848 7618.3 12985 9850.4 12953 16170 16250 17669 17980 23454 21261 17712 23692 21427 22562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56885000 5252 647 4978 9866 7977 7977 386 1 9606 Homo sapiens -0.2610679062136114 DWEDDSDEDMSNFDR Unmodified 1874.6537 0.65371584 647 A0A024RB32;Q15185-4;Q15185;A0A087WYT3;B3KUY2;B4DDC6;Q15185-2 PTGES3 Prostaglandin E synthase 3 yes no 0 0 0 1 0 1 53.788 53.788 2 8.9766E-107 15899 20230619_1880_Aki_TMTPro18x_K_F1 402.49 402.49 15720 15331 16220 15767 9660.7 22703 15697 19169 26483 29412 27003 27064 39775 36435 20790 37062 36218 38654 14558 14034 16350 15985 10832 22324 15823 20079 26415 29123 28211 27909 39319 37306 22416 37275 34521 36688 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46105000 5253 647 4978 9867 7978 7978 1 9606 Homo sapiens -0.2486248675875231 DWEMHVHFK Unmodified 1227.5495 0.54951295 1479 A8K7T4;A0A384NPY7;Q12907;B4DWN1;A0A8Q3WK65;D6RBV2;D6RIU4;D6RDX1;D6RBH1 LMAN2 Vesicular integral-membrane protein VIP36 yes no 0 0 0 6.5 0.5 1 1 47.894 47.978 4 0.00021106 13043 20230619_1886_Aki_TMTPro18x_K_F6 133.57 111.38 35416 32997 37669 38847 30892 32691 35209 32558 45568 42742 40013 44187 46613 35654 43539 43371 46237 49873 32794 30246 37978 38681 32738 33540 35578 33568 45624 42701 41635 44476 47195 37499 44475 43823 44239 47288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119100000 5254 1479 4979 9868;9869 7979 7979 1 9606 Homo sapiens -0.055159826856652217 DWEQFEYK Unmodified 1143.4873 0.48728985 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;Q14980-5;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q86XH4;F5H0Z7;F5H763;F5H3L6;F5H2F3;G1UI36;F5GZW1;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 3.33 0.471 2 1 56.985 57.008 2;3 1.9266E-05 17061 20230619_1883_Aki_TMTPro18x_K_F4 191.78 119.64 276470 255550 267250 291730 294010 335570 319630 330430 368970 335330 354580 349270 365340 305550 337280 357080 348160 369540 255780 234180 272840 292280 304110 335900 322330 338000 372450 339100 364910 352510 371140 319390 344180 358670 333160 350780 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 196380000 5255 349;3906 4980 9870;9871;9872 7980;7981;7982 7982 3 9606 Homo sapiens -0.07871430552995662 DWEQFHQPR Unmodified 1241.5578 0.55776945 4523 Q9H773 DCTPP1 dCTP pyrophosphatase 1 yes yes 0 0 0 4 0.816 1 1 1 41.409 41.472 3 1.4284E-07 10170 20230619_1883_Aki_TMTPro18x_K_F4 193.38 167.33 46674 30908 47492 49801 40942 53196 45881 45747 63231 61488 58763 66654 71617 58329 59160 64886 63268 68675 43113 28470 48097 48755 43270 53321 46525 47681 63279 61475 61106 67105 72075 60806 60635 65301 60532 65168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191180000 5256 4523 4981 9873;9874;9875 7983 7983 1 9606 Homo sapiens -0.05334712444687284 DWGEHNQR Unmodified 1040.4424 0.44240534 3876 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 0 2.5 0.5 1 1 28.857 28.944 3 0.00033222 5371 20230619_1881_Aki_TMTPro18x_K_F2 147.29 116.72 80037 48881 71974 82618 108220 114270 103180 106350 137770 102810 111200 113130 120170 94805 91328 73941 118200 107640 73829 45071 74401 81009 109440 112920 105340 109050 137250 104480 115700 113670 120960 97384 94748 76602 112760 101920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71980000 5257 3876 4982 9876;9877 7984 7984 1 9606 Homo sapiens -0.07619816575675031 DWGVALVTLHGR Unmodified 1322.7095 0.70951906 2324 B2RDV7;Q96G46;D6W636;Q96G46-3;O95323 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)];tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes no 0 0 0 2 0 1 55.214 55.234 3 4.8524E-08 16682 20230619_1881_Aki_TMTPro18x_K_F2 145.08 125.6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5258 2324 4983 9878 7985 7985 1 9606 Homo sapiens 0.061072685830367845 DWHRPCLK Unmodified 1110.5393 0.53928261 3616 P50238 CRIP1 Cysteine-rich protein 1 yes yes 0 0 1 2 0 1 38.461 38.524 4 0.0014861 9138 20230619_1881_Aki_TMTPro18x_K_F2 122.13 88.174 100660 14615 79475 58131 92537 71662 194970 201820 270360 317560 383270 416420 366000 376600 284810 376250 344390 464770 92438 13942 82645 55432 97717 74387 192860 200070 275590 317560 387220 416740 370640 389540 294890 382800 329770 440060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133160000 5259 3616 4984 9879 7986 7986 1 9606 Homo sapiens -0.011565456202561109 DWHRPCLR Unmodified 1138.5454 0.54543062 3639 Q53FN1;P52943;H0YFA4;P52943-2;H0YHD8 CRIP2 Cysteine-rich protein 2 yes no 0 0 1 2 0 1 33.726 33.782 3 0.010971 7147 20230619_1881_Aki_TMTPro18x_K_F2 77.046 52.711 27947 8678.9 26184 25530 27873 26182 30753 31354 42470 40141 35689 38819 43254 37585 34956 42813 39211 43651 25728 8122.3 26763 24384 28883 26523 31197 31899 42349 40064 37280 39411 43522 39089 35971 42965 37507 41435 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16792000 5260 3639 4985 9880 7987 7987 1 9606 Homo sapiens -0.018300273887462026 DWILPSDYDHAEAEAR Unmodified 1886.8435 0.84350594 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-2;O43852-4;A0A024R755;B3KNG6;O43852-5;O43852-9;O43852-15;H0Y875;B3KQK3 CALU Calumenin yes no 0 0 0 1.5 0.5 1 1 53.432 53.446 3 1.1723E-25 15948 20230619_1881_Aki_TMTPro18x_K_F2 222.42 204.51 152140 123560 142210 138870 131400 158160 163320 159530 157240 188190 179410 237700 228960 178840 204270 241760 220220 257290 140600 113260 145130 139310 138270 158500 162680 163660 161620 190040 185640 236910 230830 189810 209240 242670 210810 244070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 670780000 5261 2386 4986 9881;9882 7988;7989 7989 2 9606 Homo sapiens -0.064442069633742 DWLFAPHYR Unmodified 1203.5825 0.58252764 3908 Q15008;Q15008-4;B3KT66;Q15008-3;Q15008-2 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 1.5 0.5 1 1 52.916 52.932 3 0.00023251 15699 20230619_1881_Aki_TMTPro18x_K_F2 107.57 95.981 86556 64304 79728 84856 89761 101700 95860 104710 118290 85494 96280 96052 89094 81434 88698 101160 92509 113430 79938 59061 81748 84226 92673 101600 96995 106210 118240 87800 99508 96588 91191 85516 90491 101980 88620 107530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73411000 5262 3908 4987 9883;9884 7990;7991 7991 2 9606 Homo sapiens -0.01112032571313648 DWLSQNVYTCQVEHNK Unmodified 2019.9109 0.910874 2793 CON__Q1RMK2 yes yes 0 0 0 7 0 1 52.962 53.033 3 8.2823E-15 14941 20230619_1887_Aki_TMTPro18x_K_F7 185.67 163.86 + 25741 21346 24268 42596 49221 62009 37115 39892 61202 33249 46608 49617 34019 31583 44699 33442 35206 52798 23792 19705 25272 41427 48941 60658 38836 42107 60292 34525 47983 49001 35639 33278 44687 34691 33898 49878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25846000 5263 2793 4988 9885 7992 7992 1 -0.05828500024108507 DWNIPFK Unmodified 918.45995 0.45995289 4471 Q9BYG3;C9J808;C9J6C5;B4DSM4 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 0 0 0 1 0 1 60.402 60.402 2 0.090236 18661 20230619_1880_Aki_TMTPro18x_K_F1 75.213 31.509 159130 132410 144590 156000 135390 182390 156180 167680 176480 185740 167980 175020 200140 154360 174060 204000 195850 202870 147050 121420 148060 155960 142230 182020 156960 172740 178440 186400 174200 177460 201920 162630 178820 204040 187230 192670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118980000 5264 4471 4989 9886 7993 7993 1 9606 Homo sapiens -0.002538693027190675 DWNTLIVGK Unmodified 1044.5604 0.56039521 3222 O14744;O14744-2;B2RDD7;O14744-4;G3V580;G3V5L5;G3V2L6 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed;Protein arginine N-methyltransferase 5 yes no 0 0 0 1.5 0.5 1 1 60.199 60.199 2;3 0.0017473 18716 20230619_1881_Aki_TMTPro18x_K_F2 94.692 82.466 93420 79974 94102 94762 98241 120430 113570 109250 119510 115600 106470 99731 125230 100420 118300 111200 115450 117700 86414 73332 95629 94835 102200 119550 113790 112530 120940 116040 110650 102000 126840 104200 120210 111970 110500 111710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72576000 5265 3222 4990 9887;9888 7994;7995 7995 2 9606 Homo sapiens 0.03989742960266085 DWNVDLIPK Unmodified 1098.571 0.5709599 1080;2533 A0A0S2Z3X8;P31150;B4DHX4;B4DH24;G5E9U5;Q6IAT1;B4DLV7;P50395;P50395-2;Q5SX87;Q5SX86;V9GYF8;Q5SX90;V9GYJ7 GDI1;GDI2 Rab GDP dissociation inhibitor alpha;Rab GDP dissociation inhibitor beta no no 0 0 0 6 0 1 61.487 61.542 2 0.00010125 18788 20230619_1886_Aki_TMTPro18x_K_F6 155.42 81.756 105070 81419 100090 112090 87525 124790 98790 101440 143330 125440 132750 154740 146740 141090 132150 146050 146780 181070 97088 74802 102000 110780 92533 124590 100360 105920 143030 126470 137440 155220 148750 146210 135530 148610 140530 171480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108650000 5266 1080;2533 4991 9889 7996 7996 1 9606 Homo sapiens 0.02561725614691568 DWQEGGYTINDKPNPR Unmodified 1888.8704 0.8703894 2485 B4DH39;Q8TAF6;O60488-2;O60488;A0A804HI36;H0Y9A0 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes no 0 0 1 5.67 0.471 1 2 46.789 46.869 3 4.2252E-20 12426 20230619_1885_Aki_TMTPro18x_K_F5 216.71 188.08 32107 31367 38604 36634 18302 24110 26710 26947 28364 45686 38804 39307 44399 34455 37796 55251 45197 40746 29774 28745 38354 36421 20855 25405 26546 27852 29300 44936 39567 40038 44804 36799 39055 54322 43142 38871 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117190000 5267 2485 4992 9890;9891;9892 7997;7998 7997 2 9606 Homo sapiens -0.03849098352179681 DWQSYYYHHPQDR Unmodified 1793.7546 0.75463136 3957 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 6 0 1 41.234 41.328 4 0.00015671 10093 20230619_1886_Aki_TMTPro18x_K_F6 100.28 95.735 28661 25162 36118 35619 33204 41778 40913 34809 55120 34789 34064 31837 29971 25680 30780 33126 36357 32740 26572 23114 36035 35181 34968 41595 41214 36062 54437 35122 35746 32251 30776 27089 31604 33142 34707 31114 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40252000 5268 3957 4993 9893 7999 7999 1 9606 Homo sapiens -0.11049577412404687 DWQSYYYHHPQDRDR Unmodified 2064.8827 0.88268542 3957 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 1 6 0 1 38.396 38.478 5 0.0020615 8929 20230619_1886_Aki_TMTPro18x_K_F6 74.769 70.582 28366 15323 37185 31472 58075 32613 37371 41281 28055 18731 34644 23557 17057 16810 40517 22005 20996 18709 26241 14179 37273 30470 57812 33143 38629 40962 29333 20270 34437 23540 19072 17815 39611 21908 20262 17814 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14354000 5269 3957 4994 9894 8000 8000 1 9606 Homo sapiens -0.1071606188916121 DWRPAITIK Unmodified 1098.6186 0.61857879 2061 H3BQQ9;A8K503;Q7KZS0;B0QYN7;P63279 UBE2I SUMO-conjugating enzyme UBC9 yes no 0 0 1 3.5 0.5 1 1 50.802 50.853 3 0.0050898 14519 20230619_1882_Aki_TMTPro18x_K_F3 79.201 41.505 3899600 3110800 3940100 4081900 3507300 4618800 4363700 4293900 4805900 4645300 4756000 4612500 4454500 3819500 4475000 4866700 4701000 5085500 3605600 2856100 3994700 4049200 3706000 4619800 4364700 4418600 4868300 4675000 4868500 4657900 4557100 4022000 4565000 4884700 4498400 4826500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2070299999.9999998 5270 2061 4995 9895;9896 8001;8002 8001 2 9606 Homo sapiens 0.07321424605538596 DWSNDVR Unmodified 890.38824 0.38824451 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2.5 0.5 1 1 40.011 40.074 2 0.006075 9845 20230619_1881_Aki_TMTPro18x_K_F2 135.87 73.868 246810 225700 222700 261550 298460 320280 290410 280140 369670 287770 331640 321810 339970 244530 264920 303400 373010 336510 228200 206870 229610 261920 303910 318560 295610 289190 370340 291620 342230 322580 342960 258150 276860 305680 355600 319410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 277350000 5271 3758 4996 9897;9898 8003 8003 1 9606 Homo sapiens -0.06133408727237111 DWTDYDEK Unmodified 1070.4193 0.41926986 4614 Q9NWV4;D3DQ38 C1orf123 UPF0587 protein C1orf123 yes no 0 0 0 1.67 0.471 1 2 50.092 50.127 2;3 0.0052415 14492 20230619_1881_Aki_TMTPro18x_K_F2 79.059 54.183 76826 55428 73919 73410 73123 78305 76971 82564 111960 88977 91507 101400 95170 83056 93607 98415 110900 101880 70964 50917 75308 72735 76172 78906 78476 84210 111200 89996 95077 101730 96988 87078 96188 98838 105880 96759 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118870000 5272 4614 4997 9899;9900;9901 8004;8005 8005 2 9606 Homo sapiens -0.11312300203667291 DWTHQGIAK Unmodified 1054.5196 0.51959303 3898 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A8V8TKZ9;Q68CS2;A0A8V8TLW1;Q92539 LPIN1;DKFZp781P1796;LPIN2 Phosphatidate phosphatase LPIN1;Phosphatidate phosphatase LPIN2 yes no 0 0 0 7 0 1 42.67 42.745 3 0.00059 10394 20230619_1887_Aki_TMTPro18x_K_F7 98.048 68.701 44708 40997 42845 49416 50889 51171 52672 51998 62871 56674 65108 61940 62714 57335 52575 61371 68265 64891 41357 37590 43836 49237 52245 51650 53316 53197 63536 57202 66554 62501 63640 59493 54553 61785 65140 61609 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61805000 5273 3898 4998 9902 8006 8006 1 9606 Homo sapiens -0.005485983593416677 DWVLNEFK Unmodified 1049.5182 0.51819605 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 6.5 0.5 2 2 61.888 61.934 2;3 0.0018656 18967 20230619_1886_Aki_TMTPro18x_K_F6 135.83 92.127 1213400 1013000 1137400 1260900 997900 1494700 1253900 1280200 1623500 1256700 1084300 965840 1199500 983890 1097400 1299200 1098800 1078700 1121600 929420 1160900 1255800 1058300 1487600 1260700 1321900 1610800 1263600 1142100 995050 1215700 1031100 1118900 1287700 1051100 1026900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1396400000 5274 3137 4999 9903;9904;9905;9906 8007;8008 8007 2 9606 Homo sapiens -0.004582324480907118 DWVLNEFR Unmodified 1077.5243 0.52434406 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7;A0A0U1RQJ0 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 5.5 0.5 1 1 60.248 60.303 2 0.0019506 18017 20230619_1885_Aki_TMTPro18x_K_F5 134.48 98.598 272060 217620 259700 269660 213480 324110 268650 272370 377970 296820 282920 286360 292540 286420 327920 301180 305520 337780 251430 199690 264310 268730 227820 322190 271050 282460 374840 298640 295290 291140 300230 296150 331450 304580 292760 320320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 502040000 5275 1328 5000 9907;9908 8009;8010 8009 2 9606 Homo sapiens -0.011317142165808036 DWYPHSR Unmodified 959.42496 0.42496436 3383 V9HW43;P04792;A0A6Q8PFK8;A0A6Q8PGK1;A0A6Q8PHJ6;A0A6Q8PFE7;A0A6Q8PF43;A0A6Q8PHA6;A0A6Q8PH65;A0A6Q8PGY2;A0A8E9ZT92 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 0 0 0 6 0.816 1 1 1 37.173 37.248 3 0.012046 8408 20230619_1886_Aki_TMTPro18x_K_F6 85.212 61.783 54138 29861 53032 68190 62740 82934 74386 98181 365240 208110 188760 267980 298280 222990 116900 259000 258880 299380 49949 27681 54233 65832 65470 82996 83060 102070 348160 206700 206880 267470 292340 233580 130680 261500 246600 283770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212960000 5276 3383 5001 9909;9910;9911 8011 8011 1 9606 Homo sapiens -0.05637112110662201 DYAAYNVLDDPELR Unmodified 1652.7682 0.76821573 1405 A0A384MDT9;Q86SX6 GLRX5 Glutaredoxin-related protein 5, mitochondrial yes no 0 0 0 3 0.816 1 1 1 59.466 59.481 3 4.6505E-07 18204 20230619_1882_Aki_TMTPro18x_K_F3 136.33 121.87 84477 66262 78616 79435 65201 75920 81200 87702 96932 100720 97261 92609 99935 83331 92326 103160 96353 100100 78049 60787 80154 79131 69280 77308 81475 89106 97902 100820 99858 94083 101530 87328 94302 103150 92177 95098 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158700000 5277 1405 5002 9912;9913;9914 8012;8013 8013 2 9606 Homo sapiens -0.03205764423819346 DYAFIHFDER Unmodified 1311.5884 0.58840088 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2YQV8;B7Z213;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 3.5 1.12 1 1 1 1 52.035 52.086 3 6.905E-07 14915 20230619_1883_Aki_TMTPro18x_K_F4 169.58 149.11 529190 370370 443810 490910 468200 552950 504230 513040 691230 594890 558280 555620 608450 521700 604400 649660 616750 679890 488230 340270 458620 486560 486210 553370 512020 529000 688220 595960 581290 564770 619310 546160 615620 652330 590420 645210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1710499999.9999998 5278 1680;2265 5003 9915;9916;9917;9918 8014;8015;8016 8015 3 9606 Homo sapiens -0.05492978850270447 DYAFIHFDERDGAVK Unmodified 1781.8373 0.83729835 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2YQV8;B7Z213;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 1 5.5 0.5 1 1 51.668 51.744 4 0.00021242 14537 20230619_1885_Aki_TMTPro18x_K_F5 95.654 71.613 78632 89107 79463 67400 91216 56702 78624 88437 74659 83683 72288 66102 69437 60637 85205 89719 88873 78878 72890 81351 80689 69895 93101 59104 79948 87979 76297 84219 74165 67772 71734 64264 86589 89069 84928 75070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200820000 5279 1680;2265 5004 9919;9920 8017 8017 1 9606 Homo sapiens -0.0223468040426269 DYAFVHFEDR Unmodified 1297.5728 0.57275081 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PH35;B4DMD1;A0A286YEZ8 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 3.5 1.12 1 1 1 1 49.332 49.394 3 2.4713E-07 13842 20230619_1882_Aki_TMTPro18x_K_F3 220.82 184.5 586660 530380 579490 557320 567990 656900 641850 635620 855650 663590 633470 583770 629510 599850 703890 702010 668030 704310 542770 485710 589010 562310 593460 656370 649370 651440 850220 667280 660080 597090 646670 623470 712490 703990 639760 668800 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2002999999.9999998 5280 3254 5005 9921;9922;9923;9924 8018;8019;8020;8021 8019 4 9606 Homo sapiens -0.06413265367336862 DYAFVHMER Oxidation (M) 1182.5128 0.51279309 2142;4410 A8K9U0;Q9BWF3;E9PB51;Q9BWF3-4;D6R9K7;J3QRR5;Q9BWF3-3;Q9BWF3-2;Q9BQ04;E9PLB0;E9PM61;U3KQD5 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B no no 0 1 0 3.5 0.5 1 1 38.009 38.057 3 0.016032 8770 20230619_1882_Aki_TMTPro18x_K_F3 63.32 45.808 74127 57953 72258 80377 92249 87194 79322 86245 116940 95587 116660 99892 98238 83699 91104 104510 131370 108890 68510 53246 73881 79397 93851 87656 81906 88404 116890 96278 118760 100740 100560 87980 95053 104890 125150 103460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205620000 5281 2142;4410 5006 9925;9926 8022 8022 1339 1 9606 Homo sapiens -0.07116279302226758 DYAFVHMER Unmodified 1166.5179 0.51787847 2142;4410 A8K9U0;Q9BWF3;E9PB51;Q9BWF3-4;D6R9K7;J3QRR5;Q9BWF3-3;Q9BWF3-2;Q9BQ04;E9PLB0;E9PM61;U3KQD5 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B no no 0 0 0 4.5 0.5 1 1 43.957 44.001 3 0.00066462 11272 20230619_1883_Aki_TMTPro18x_K_F4 107.24 92.577 102350 100270 104480 116950 107320 124930 109580 131650 147270 131420 150070 117960 167270 131900 104810 143930 146090 140650 94770 91886 106080 116860 111420 125880 111600 133940 147960 132470 154260 121000 167150 136300 110160 144150 139340 133650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167280000 5282 2142;4410 5006 9927;9928 8023;8024 8023 2 9606 Homo sapiens -0.058719754395951895 DYAPPPR Unmodified 814.39735 0.39735263 3564;3963 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;B3KRG5;H3BUY5;Q96E39;Q2VIN3 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 0 0 3.5 1.12 1 1 1 1 33.737 33.802 2 0.0044359 6992 20230619_1883_Aki_TMTPro18x_K_F4 148.28 94.225 261910 149230 275660 308350 376600 421950 317480 353730 432320 314220 400620 388260 391250 333700 341200 203110 425300 410760 241820 138070 280590 299420 381820 416140 327130 364890 432250 322210 411940 388660 397280 339420 351660 218320 406010 387990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 375680000 5283 3564;3963 5007 9929;9930;9931;9932 8025;8026 8026 2 9606 Homo sapiens -0.017270153709091574 DYAVSTVPVADGLHLK Unmodified 1683.8832 0.88318591 2229 B2R644;O94760;B4E3V1;B4DYP1;B4DGT0;O94760-2 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 6.5 0.5 1 1 55.524 55.592 3 1.0121E-25 16017 20230619_1887_Aki_TMTPro18x_K_F7 186.85 163.62 227160 210940 226140 187450 117710 126200 202780 211820 212790 275320 246640 242670 275190 214290 224520 321450 263040 274580 210220 192900 227920 190850 133070 134460 200050 212150 217830 273620 252650 246970 277430 227700 231870 318370 251380 261260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 207860000 5284 2229 5008 9933;9934 8027;8028 8028 2 9606 Homo sapiens 0.06859964778004723 DYCAHHLIR Unmodified 1183.5557 0.55566096 3464 P17568 NDUFB7 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 yes yes 0 0 0 6.5 0.5 1 1 31.412 31.478 3 1.4284E-05 5920 20230619_1887_Aki_TMTPro18x_K_F7 166.3 136.63 40542 32468 47355 49147 68270 69072 56557 56664 68716 47645 55754 51136 56629 53831 48667 45312 57192 53857 37536 29859 47857 48491 68891 68038 58068 58493 68746 48805 57813 51860 57438 54977 50076 46174 54615 51075 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37579000 5285 3464 5009 9935;9936 8029;8030 8030 2 9606 Homo sapiens -0.028774644541499583 DYCNDLK Unmodified 926.38038 0.38038194 1875 A0A994J595;P54289-4;P54289-5;P54289;Q9UIU0;P54289-3;P54289-2;A0A994J5M8;H0Y715;Q9UDQ3 CACNA2D1;WUGSC:H_DJ0560O14.1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 3 0 1 43.169 43.235 2 0.021678 11014 20230619_1882_Aki_TMTPro18x_K_F3 92.439 65.837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5286 1875 5010 9937 8031 8031 1 9606 Homo sapiens -0.08575304039027287 DYDAMGSQTK Oxidation (M) 1130.455 0.45500344 4699 Q9Y230;B3KNL2;Q9Y230-2;M0R0Y3 RUVBL2 RuvB-like 2 yes no 0 1 0 2.5 0.5 1 1 36.519 36.575 3 0.0015243 8197 20230619_1882_Aki_TMTPro18x_K_F3 85.622 68.597 26134 16952 27577 35204 37422 36209 36255 38791 45314 36793 42574 45420 47764 40457 42163 36803 49277 55862 24145 15675 28085 34025 38026 36577 36898 39397 45519 37566 44053 45532 48321 41733 43335 38126 47124 52832 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26790000 5287 4699 5011 9938;9939 8032 8032 2863 1 9606 Homo sapiens -0.10500586018315516 DYDAMGSQTK Unmodified 1114.4601 0.46008882 4699 Q9Y230;B3KNL2;Q9Y230-2;M0R0Y3 RUVBL2 RuvB-like 2 yes no 0 0 0 4 0 1 42.144 42.187 3 0.04218 10488 20230619_1883_Aki_TMTPro18x_K_F4 57.149 46.539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5288 4699 5011 9940 8033 8033 1 9606 Homo sapiens -0.09256282155683948 DYDDMSPR Oxidation (M) 1013.376 0.37602484 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;B3KU16 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 1 0 1.33 0.471 2 1 32.419 32.44 2 0.004167 7165 20230619_1880_Aki_TMTPro18x_K_F1 113.41 101.92 106010 78682 105120 105550 156270 152810 135460 146660 184610 138730 162880 160160 158330 150860 155740 164350 204110 173740 97965 72280 107620 105000 157640 150810 139280 149950 184280 141390 167920 161370 161800 156560 161110 165450 194610 165030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1166100000 5289 1865 5012 9941;9942;9943 8034;8035;8036 8036 1195 3 9606 Homo sapiens -0.13012813252578326 DYDDMSPR Unmodified 997.38111 0.38111022 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;B3KU16 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 1.5 0.5 1 1 38.443 38.475 2 9.3603E-07 9346 20230619_1880_Aki_TMTPro18x_K_F1 201.49 190 161110 115140 143520 155520 207360 222690 190080 186830 276650 198620 201340 205390 229750 187700 185310 220860 256720 220180 148730 105800 148300 154550 210030 219240 195190 193610 273770 200540 211320 207620 231540 195990 193330 221280 244690 209270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 692140000 5290 1865 5012 9944;9945 8037;8038 8037 2 9606 Homo sapiens -0.11768509389969495 DYDEEEQGYDSEK Unmodified 1605.5955 0.59545591 3797 Q5T760;Q05519-2;Q05519;Q6MZM2;Q6N079;Q5T757 SRSF11;DKFZp686D02116;DKFZp686P22142 Serine/arginine-rich splicing factor 11 yes no 0 0 0 1 0 1 43.173 43.173 3 0.00011838 11528 20230619_1880_Aki_TMTPro18x_K_F1 97.463 92.148 13383 11359 11797 15572 14851 14273 15294 17922 19308 14428 16969 16840 17329 10794 15960 19137 19140 17403 12366 10432 12182 15359 15189 14616 15520 17959 19332 14839 17534 16797 17588 11788 16446 18988 18270 16554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43883000 5291 3797 5013 9946 8039 8039 1 9606 Homo sapiens -0.18311800341689377 DYDHLFK Unmodified 936.43413 0.43413207 3926 Q15286;F5H157;Q15286-2;F5H7F8;B4DTA6 RAB35 Ras-related protein Rab-35 yes no 0 0 0 4.5 0.5 1 1 48.423 48.481 3 0.017909 13077 20230619_1885_Aki_TMTPro18x_K_F5 76.899 46.329 146130 95175 115730 134180 133150 132040 132980 142450 162710 183340 178810 164680 197240 159570 151620 203370 182400 171370 134720 87530 120430 132240 136920 133940 135050 145860 164880 182500 183350 167930 198510 167100 156960 201730 174150 163150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 213760000 5292 3926 5014 9947;9948 8040 8040 1 9606 Homo sapiens -0.03662763545003145 DYDRGYDSR Unmodified 1145.4738 0.47376505 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;F8VX11 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 1 1.5 0.5 1 1 30.753 30.785 3 0.0032166 6006 20230619_1881_Aki_TMTPro18x_K_F2 88.056 70.845 34084 32202 36937 29647 58174 31919 36671 47385 50554 40515 45850 27855 35545 30324 40127 30560 53059 34141 31568 29454 37510 30246 57931 32569 38682 47097 50515 40932 46692 28995 36841 31234 41374 30941 50511 32458 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19456000 5293 2578 5015 9949;9950 8041 8041 1 9606 Homo sapiens -0.0931528833223183 DYDSFVLPLLEDK Unmodified 1552.7661 0.76609047 2981 F8W1Q9;F8VS81;Q12792;Q12792-3 TWF1 Twinfilin-1 yes no 0 0 0 5.5 0.5 1 1 65.044 65.088 3 0.00072597 20211 20230619_1885_Aki_TMTPro18x_K_F5 89.013 74.855 18913 15095 16491 17259 16520 20087 16649 16441 22430 19703 21015 24804 28354 17798 17543 29935 27161 28542 17467 13840 16959 17290 17192 20014 16961 17141 22468 19899 21960 24718 28160 19255 18628 29765 25904 27119 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69616000 5294 2981 5016 9951;9952 8042 8042 1 9606 Homo sapiens 0.011818068383718128 DYDSTCVFCR Unmodified 1321.5067 0.50672144 4572 Q9NQE9 HINT3 Histidine triad nucleotide-binding protein 3 yes yes 0 0 0 4 0 1 46.462 46.505 2 1.285E-06 12416 20230619_1883_Aki_TMTPro18x_K_F4 175.51 165.73 40639 33868 35556 48523 37089 29364 43172 40447 45799 52774 61518 64339 60803 53791 54422 55157 69211 69179 37543 31122 36630 47529 38481 31430 43265 40930 47149 52998 62362 64408 61794 55913 56270 56192 66078 65558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28356000 5295 4572 5017 9953 8043 8043 1 9606 Homo sapiens -0.14117165596030645 DYEEIGPSICR Unmodified 1337.5922 0.59216562 622 P61158;A0A024RAI1;Q59FV6;B4DXW1;B4DT29;B4DTI0;B4E1U3 ACTR3 Actin-related protein 3 yes no 0 0 0 2.5 0.5 1 1 47.712 47.787 2 3.0191E-09 13429 20230619_1881_Aki_TMTPro18x_K_F2 231.16 216.01 212870 168150 196480 217830 239220 284160 234280 231460 276440 283500 271970 265930 292400 235070 233720 330320 295550 299770 196670 154370 201750 216690 245220 281030 237800 241440 279230 283240 280040 269830 294960 248580 242650 328400 282210 285030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 332210000 5296 622 5018 9954;9955 8044;8045 8044 2 9606 Homo sapiens -0.06312677138748768 DYEEVGVDSVEGEGEEEGEEY Unmodified 2347.8976 0.89757075 2408;4144 P68363;B3KT06;A8JZY9;P68363-2;B4DN58;Q71U36;Q71U36-2;B4DQK4;Q9UQM3 TUBA1B;TUBA1A Tubulin alpha-1B chain;Tubulin alpha-1A chain no no 0 0 0 1.75 0.829 2 1 1 59.506 59.516 2;3 5.212E-22 18246 20230619_1880_Aki_TMTPro18x_K_F1 231.92 231.92 90610 75234 86287 98315 64732 84351 82429 85203 95415 123250 124250 127000 141180 116900 112110 146020 134900 145920 83759 69063 87768 97193 69545 86350 82561 88029 97740 122590 126850 128430 142150 122470 115960 146160 128930 138560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7742599999.999999 5297 2408;4144 5019 9956;9957;9958;9959 8046;8047 8046 2 9606 Homo sapiens -0.2224621369423403 DYEILFK Unmodified 926.47493 0.47493425 1681 A0A7I2YQQ3;A8K335;Q92820;A0A7I2V5X9;B4DVI2;A0A7I2V5P2 GGH Gamma-glutamyl hydrolase yes no 0 0 0 6 0 1 60.916 60.974 2 0.019421 18520 20230619_1886_Aki_TMTPro18x_K_F6 105.95 26.35 376140 320260 345430 436550 357450 406380 421290 437990 458150 410480 410390 427160 448030 360700 388140 462140 434970 481760 347660 294100 354230 430760 372190 413830 422230 444600 462690 416810 425060 430710 453140 379760 398760 463640 416050 457200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227350000 5298 1681 5020 9960 8048 8048 1 9606 Homo sapiens 0.008755777746387139 DYETATLSEIK Unmodified 1268.6136 0.61361257 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;B4DFY0;B3KUX9;B7Z2W3;H7C5W8 ACTN1 Alpha-actinin-1 yes no 0 0 0 2.71 1.03 1 2 2 2 53.879 53.906 2;3 2.2198E-17 16158 20230619_1881_Aki_TMTPro18x_K_F2 227.88 177 284660 236540 277830 235680 230110 251140 311000 309180 344080 376840 315000 324330 377490 301720 327160 427390 316460 361540 263190 216590 281850 238640 244940 254260 309950 313530 347820 375510 327370 330930 380750 318670 333560 423480 303200 343930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1959199999.9999998 5299 387 5021 9961;9962;9963;9964;9965;9966;9967 8049;8050;8051 8049 3 9606 Homo sapiens -0.009949688383812827 DYEVSDSAPHLEGLAEFQENVR Unmodified 2504.1456 0.1455612 4547 Q9HBM1 SPC25 Kinetochore protein Spc25 yes yes 0 0 0 3 0 1 57.225 57.258 3 5.5735E-24 17315 20230619_1882_Aki_TMTPro18x_K_F3 190.57 175.91 28545 26431 32482 26832 26253 32210 34966 29093 25852 32692 34561 26695 33613 24996 38718 22269 23690 28690 26447 24196 32548 27163 27980 32098 34478 30043 27221 32651 34978 27317 34524 25733 38362 22838 22846 27163 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61667000 5300 4547 5022 9968 8052 8052 1 9606 Homo sapiens -0.04634575525278706 DYFEEYGK Unmodified 1049.4342 0.43419164 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28;A0A087WUI2;I6L957;A0A7I2V4N0;A0A7I2YQN4 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 3 0.816 2 2 2 52.726 52.765 2;3 0.0008894 15361 20230619_1882_Aki_TMTPro18x_K_F3 153.78 123.21 2354900 1634100 1945400 2638900 2103200 3128800 2466800 2488100 4060700 3186300 3107000 3882400 4077200 3666700 2676200 4796000 4085400 4836500 2172300 1504900 2018000 2585600 2192600 3108400 2513900 2605300 4006900 3207500 3278200 3902400 4067300 3847800 2835800 4796800 3900400 4590600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4756600000 5301 3491 5023 9969;9970;9971;9972;9973;9974 8053;8054;8055;8056 8055 4 9606 Homo sapiens -0.08854808335672715 DYFEQYGK Unmodified 1048.4502 0.45017606 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;A0A7I2YQX9;F8VZ49;Q32P51;A0A024QZ98;A0A2R8Y4L2;F8VTQ5;A0A7I2V5U9 HNRNPA1;HNRPA1;hCG_2020860;HNRNPA1L2;RP11-78J21.1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 4.5 1.5 1 2 2 2 2 1 51.828 51.888 2;3 0.00012554 14815 20230619_1883_Aki_TMTPro18x_K_F4 176.84 144.62 1931400 1431200 1633100 1935100 1911900 2315300 2029700 2012500 3048200 2404400 2351400 2175600 2540500 2004500 2136200 2512000 2250900 2366400 1782600 1314900 1690100 1916800 1971300 2304500 2070000 2087100 3018400 2404100 2451700 2213900 2566800 2101000 2187800 2507000 2153400 2248800 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 10014000000 5302 640 5024 9975;9976;9977;9978;9979;9980;9981;9982;9983;9984 8057;8058;8059;8060 8058 4 9606 Homo sapiens -0.07211102098744959 DYFFALAHTVR Unmodified 1338.6721 0.67207093 3432 Q59GM9;P11216 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 2.5 0.5 1 1 57.153 57.178 3 2.3593E-09 17262 20230619_1882_Aki_TMTPro18x_K_F3 155.48 124.11 96747 78325 88345 95116 82036 105930 101370 101610 133130 88548 94384 91224 96200 84790 115190 98138 97999 109770 89389 71853 90413 94824 86422 106160 102050 103760 132120 90371 98768 92315 99049 88392 115760 99111 94013 104100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 177640000 5303 3432 5025 9985;9986 8061;8062 8062 2 9606 Homo sapiens 0.016281773174114278 DYFGAHTYELLAK Unmodified 1526.7405 0.74054442 3630 P52209-2;P52209;B4E2U0;B4DL86;B4DV68;A9Z1X1 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 8 0 1 57.264 57.315 4 0.0018815 16715 20230619_1888_Aki_TMTPro18x_K_F8 81.92 67.044 43930 122080 55753 50299 39338 77576 46630 45719 54781 54946 47012 51571 53063 46570 76132 59483 71818 60950 41320 110960 55409 57275 42608 75794 46880 49148 55069 54970 48956 52322 55082 48889 76672 59703 68681 57915 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52056000 5304 3630 5026 9987 8063 8063 1 9606 Homo sapiens -0.0017562289338002302 DYGCIVK Unmodified 853.40039 0.4003891 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 0 6 0 1 46.381 46.464 2 0.017711 12339 20230619_1886_Aki_TMTPro18x_K_F6 108.24 65.238 315620 250730 283450 305580 355990 383160 383620 337050 422610 403240 413020 428730 453540 384110 358910 518670 566690 488570 291540 230040 291870 305080 364760 380550 386200 349370 428010 404870 426010 432730 457360 404760 378940 516870 539660 464650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82637000 5305 1532 5027 9988 8064;8065 8064 2 9606 Homo sapiens -0.032175083083984646 DYGEIFNVQLPDKEER Unmodified 1950.9323 0.93232095 573 A0A024R9G7;Q6PL18;A0A0B4J211 ATAD2 ATPase family AAA domain-containing protein 2 yes no 0 0 1 5 0 1 59.211 59.265 3 2.1157E-14 17593 20230619_1885_Aki_TMTPro18x_K_F5 172.2 154.92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5306 573 5028 9989 8066 8066 1 9606 Homo sapiens -0.00510791723741022 DYGHGSYGGQR Unmodified 1195.5006 0.5006485 4029 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-2 ZNF326 DBIRD complex subunit ZNF326 yes no 0 0 0 8 0 1 28.529 28.555 3 0.00014551 5152 20230619_1888_Aki_TMTPro18x_K_F8 115.91 100.02 6601.6 4930.4 8178.8 8260.8 10925 11137 8555.6 7954.3 10945 8384.9 12273 13074 13103 10353 6571.1 8151.3 15001 10612 6113.1 4541.4 8216.9 8098.7 11059 10968 8838.8 8362.1 11058 8601.6 12560 12960 13038 10656 7267.7 8362.7 14241 10069 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4753400 5307 4029 5029 9990 8067 8067 1 9606 Homo sapiens -0.0892817972105604 DYGHSSSRDDYPSR Unmodified 1640.6815 0.68152599 3564;3963 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;B3KRG5;H3BUY5;Q96E39;Q2VIN3 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 0 1 3.5 1.5 1 1 27.626 27.701 3;4 0.035816 5007 20230619_1885_Aki_TMTPro18x_K_F5 52.265 39.065 4477.3 4913.1 4680.6 4395.6 7548.7 6244.4 4966.5 5857.9 6840.1 6533.1 6101.9 4372.8 4806.9 4390.4 6135.2 4342.9 5432.2 6398.4 4150.4 4490.9 4775.6 4510.9 7531.3 6174.8 5217.3 6022.2 6837.1 6502.1 6228.6 4539.3 5011.5 4531 6167 4485.3 5211 6051.9 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6924500 5308 3564;3963 5030 9991;9992 8068;8069 8069 2 9606 Homo sapiens -0.11318750925670429 DYGNSPLHR Unmodified 1057.4941 0.49410656 1159;1980 P26599;P26599-2;A0A0U1RRM4;P26599-1;A0A7I2V621;A0A0D9SF20;A0A087WUW5;K7ELW5;A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 no no 0 0 0 6.67 1.25 1 1 1 33.123 33.18 3 2.7563E-12 6785 20230619_1888_Aki_TMTPro18x_K_F8 195.79 160.52 81381 72967 91383 87145 98137 110690 91950 96801 118010 85724 98020 78780 79660 65773 103990 72815 89878 72302 75372 66902 92070 87167 101270 109820 93902 99526 117830 87087 100620 79906 83017 68666 104350 73143 86009 68743 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71698000 5309 1159;1980 5031 9993;9994;9995 8070;8071 8071 2 9606 Homo sapiens -0.03234072881764405 DYGVLLEGSGLALR Unmodified 1461.7827 0.78274359 1441 A0A384MTR2;P30048-2;P30048;Q53HC2 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes no 0 0 0 7.5 0.5 1 1 62.4 62.43 3 2.4405E-12 18899 20230619_1887_Aki_TMTPro18x_K_F7 190.1 155.85 168080 134090 153980 172990 160060 161310 193170 191950 219230 185550 186290 181040 204130 174380 210310 213780 213510 241220 155280 123090 157800 171370 166580 164730 193610 193820 220470 187770 193490 183860 208090 182250 213950 215700 204440 228720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1940599999.9999998 5310 1441 5032 9996;9997 8072;8073 8072 2 9606 Homo sapiens 0.07032352515011553 DYHFKVDNDENEHQLSLR Unmodified 2258.0352 0.035222893 1089 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;A0A7I2V4G8;A0A7I2V3G5;A0A7I2V579 NPM1 Nucleophosmin yes no 0 0 1 4 0.816 2 2 2 43.585 43.65 4;5 1.6723E-48 11056 20230619_1885_Aki_TMTPro18x_K_F5 284.46 271.05 501780 79884 427980 432610 559130 184350 459020 601300 267680 475060 467060 239940 314150 205180 399740 239580 203890 173900 461080 76927 442260 404480 563910 215220 463470 581590 292440 478500 461850 253610 328680 215040 393300 237110 196770 165980 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1174600000 5311 1089 5033 9998;9999;10000;10001;10002;10003 8074;8075;8076;8077 8076 4 9606 Homo sapiens -0.04347331003009458 DYIHVVDLAK Unmodified 1171.6237 0.62372375 1466 A0A384NL38;Q14376;Q5QPP9;Q5QPP3;Q5QPP4;A0A024RAB7;Q14376-2 GALE UDP-glucose 4-epimerase yes no 0 0 0 7 0 1 53.3 53.368 3 0.0018347 15073 20230619_1887_Aki_TMTPro18x_K_F7 96.015 57.612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5312 1466 5034 10004 8078 8078 1 9606 Homo sapiens 0.04477683677509958 DYIPVDQEELR Unmodified 1375.662 0.66195975 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 1 0 1 51.154 51.154 2 1.7517E-16 14840 20230619_1880_Aki_TMTPro18x_K_F1 219.03 187.61 61859 52260 56608 66807 52850 74259 61748 61962 84747 90141 81141 96747 95175 75791 80666 89324 90927 103140 57171 47959 57965 66343 55613 74205 62458 64911 84954 89791 84126 97105 95973 79633 82898 90292 86984 97767 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138420000 5313 3881 5035 10005 8079 8079 1 9606 Homo sapiens -0.010844751984905088 DYIPVDQEELRDYVK Unmodified 1880.9156 0.91560825 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 4.5 0.5 1 1 57.489 57.521 3 2.9111E-08 17292 20230619_1883_Aki_TMTPro18x_K_F4 142.4 119.3 132540 121920 124710 130990 124860 129930 136900 138910 126990 170740 162540 153900 170480 133890 158050 193850 181060 181560 122590 111660 127360 131600 129900 131760 137110 142120 131580 170220 165400 156400 173080 142000 162400 193030 173020 172570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 472440000 5314 3881 5036 10006;10007 8080 8080 1 9606 Homo sapiens 0.010387073903075361 DYIVVGSDSGR Unmodified 1166.5568 0.5567664 3931 Q15393;A8K6V3;Q15393-2;J3QL37;J3QRB2 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 3.5 0.5 1 1 45.07 45.129 2 4.0313E-13 11776 20230619_1883_Aki_TMTPro18x_K_F4 217.63 201.41 398490 309030 331750 388500 433640 485720 432830 401170 574420 462570 482420 476210 474070 421110 426080 495180 494730 544140 367840 283640 344460 386930 442810 481820 440580 417380 573220 464990 498820 480980 482050 440140 438300 498950 473030 516130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 386460000 5315 3931 5037 10008;10009 8081;8082 8082 2 9606 Homo sapiens -0.019849716042244836 DYIYAVTPLLEDALMDR Unmodified 1996.9816 0.98157933 3309 O75533;Q9NTB4;H7C341 SF3B1;DKFZp434M052 Splicing factor 3B subunit 1 yes no 0 0 0 5.5 0.5 1 1 66.493 66.536 3 1.449E-09 20784 20230619_1885_Aki_TMTPro18x_K_F5 108.56 98.712 8054.9 4921.7 7072.5 7565.9 6148.9 5840.8 8331.2 9487.2 10168 8870.1 8590.9 8877.6 11326 8326.9 10613 11174 9903.4 8933 7428.8 4532.4 7254.7 7402.6 6515.3 6119.7 8332.4 9420.3 10190 8995.7 9012.1 8998.7 11430 8760.6 10768 11057 9475.7 8512 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13120000 5316 3309 5038 10010;10011 8083;8084 8083 2 9606 Homo sapiens 0.022967802408629723 DYIYAVTPLLEDALMDR Oxidation (M) 2012.9765 0.97649395 3309 O75533;Q9NTB4;H7C341 SF3B1;DKFZp434M052 Splicing factor 3B subunit 1 yes no 0 1 0 5.5 0.5 1 1 65.903 65.946 3 0.044275 20727 20230619_1886_Aki_TMTPro18x_K_F6 41.513 29.537 5198.7 4300.3 5481.8 6494.3 4413.9 5381.8 6619.8 4817.5 5499.8 7391.9 9246.9 10258 9604.8 8966.6 7969.3 8745.1 8798.1 11334 4809.6 3954.1 5536.8 6359.4 4726.9 5511.3 6511.8 5040 5818.4 7417.2 9333 10235 9716.7 9278.5 8183.4 8934.7 8427.5 10729 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51863000 5317 3309 5038 10012;10013 8085 8085 1933 1 9606 Homo sapiens 0.01052476378231404 DYLDFLDDEEDQGIYQSK Unmodified 2191.9433 0.94333915 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 1 0 1 63.852 63.852 3 1.0858E-13 20065 20230619_1880_Aki_TMTPro18x_K_F1 151.04 143.24 40275 31785 30396 41148 28812 45849 43679 36414 40054 58849 52912 49754 60829 49663 49815 58568 49955 57381 37157 29180 31766 40817 30568 45754 43052 38470 41607 57979 54005 50913 61279 51724 50908 58623 47847 54486 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87519000 5318 1104 5039 10014 8086 8086 1 9606 Homo sapiens -0.10495478930761237 DYLHLPPEIVPATLR Unmodified 1732.9512 0.9512059 3594;1322 A0A1W2PQS6;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A2R8Y6L3;S4R435;P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 no no 0 0 0 7.5 0.5 1 1 61.05 61.086 3 1.0285E-10 18184 20230619_1888_Aki_TMTPro18x_K_F8 157.23 134 173660 122850 169970 218120 157680 276630 203610 212520 304080 275550 254330 300650 320420 290580 263160 332810 314040 409840 160410 113280 173230 212920 167000 273380 205690 223200 302130 276070 266430 303600 322410 302360 271830 337830 300640 388100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1799699999.9999998 5319 1322;3594 5040 10015;10016 8087;8088 8088 2 9606 Homo sapiens 0.11404834428640243 DYLHYHIK Unmodified 1087.5451 0.5450795 3234 Q53R19;O15144;A0A024R408;H7C3F9 ARPC2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 7.5 0.5 1 1 43.184 43.228 4 0.0017854 10774 20230619_1888_Aki_TMTPro18x_K_F8 117.04 96.707 244670 162460 224200 278050 308360 384420 288250 282500 373840 293630 258320 184510 262350 201630 275710 302830 281230 223320 225810 149760 231110 272320 313640 378000 294280 295850 371330 293170 270200 193220 268190 212860 280570 298170 268630 213170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 246520000 5320 3234 5041 10017;10018 8089 8089 1 9606 Homo sapiens 0.004808761630556546 DYLHYIR Unmodified 978.49232 0.49231565 3713 P62280;M0QZC5;M0R1H5 RPS11 40S ribosomal protein S11 yes no 0 0 0 5.33 3.09 1 1 1 45.265 45.322 3 0.0039466 11416 20230619_1887_Aki_TMTPro18x_K_F7 107.66 65.549 198750 160660 174920 197660 212990 231640 226680 221720 304000 194500 192050 158350 185430 159480 189310 202230 217550 173820 183580 147400 180400 197000 218740 231430 230000 226450 300520 197190 201810 162630 189750 166720 194040 200920 207570 165560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 768730000 5321 3713 5042 10019;10020;10021 8090;8091;8092 8091 3 9606 Homo sapiens 0.002209181002740479 DYLLCDYNR Unmodified 1230.5339 0.53392246 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;B1AK85;A0A6I8PRV6 CAPZB F-actin-capping protein subunit beta yes no 0 0 0 4 0.816 1 1 1 50.672 50.731 2 1.0675E-05 14286 20230619_1883_Aki_TMTPro18x_K_F4 172.21 157.44 525950 468610 448070 531580 490530 511040 552490 572010 694290 648510 597990 531740 572110 536180 614430 641170 651410 618060 486000 429460 462770 531530 507970 519960 557780 582090 695470 647870 616610 545480 587180 558380 626230 641300 622680 587400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 969620000 5322 1434 5043 10022;10023;10024 8093;8094 8094 2 9606 Homo sapiens -0.0721231399336375 DYLQLLR Unmodified 919.51272 0.51271674 3181 L0R6Q1 SLC35A4 yes yes 0 0 0 1 0 1 58.268 58.268 2 0.0092624 17806 20230619_1880_Aki_TMTPro18x_K_F1 119.56 56.578 53592 36124 47262 65714 57084 89792 67671 63268 100340 62042 67657 80421 65950 62347 76935 71841 77389 94156 49452 33327 48841 64138 59088 88233 68558 66459 98927 63433 70986 80158 67950 65405 78042 73300 74157 89132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234200000 5323 3181 5044 10025 8095 8095 1 9606 Homo sapiens 0.04974088760104678 DYNASASTISPPSSMEEDK Oxidation (M) 2043.8579 0.85789496 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 1 0 2 1 1 1 46.042 46.08 3 1.3043E-07 12258 20230619_1882_Aki_TMTPro18x_K_F3 112.55 103.45 32347 24618 29921 31534 33480 31481 28962 31369 35133 33880 45191 50260 48479 40976 45012 45137 54259 53897 29879 22602 30647 31278 34346 31851 29681 32130 35836 34600 46072 49962 49211 42796 46341 45783 51823 51100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98535000 5324 630 5045 10026;10027 8096;8097 8097 363 2 9606 Homo sapiens -0.12227967388048455 DYNASASTISPPSSMEEDK Unmodified 2027.863 0.86298034 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 3 0 1 49.994 50.069 3 4.9186E-07 14154 20230619_1882_Aki_TMTPro18x_K_F3 107.72 98.066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5325 630 5045 10028 8098 8098 1 9606 Homo sapiens -0.10983663525439624 DYNDADMAR Oxidation (M) 1085.4084 0.4083876 3899 Q14696;H0YLI4;Q14696-2 MESDC2 LDLR chaperone MESD yes no 0 1 0 1 0 1 31.568 31.568 2 0.047061 6601 20230619_1880_Aki_TMTPro18x_K_F1 65.305 60.522 18787 10320 21853 24044 28494 31029 24742 30708 38093 28146 35302 39994 33414 32443 32309 21452 44583 43043 17360 9569.8 22057 23218 28984 30809 25586 31306 37902 28959 36296 39764 34151 33143 33486 22980 42527 40659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41350000 5326 3899 5046 10029 8099 8099 2576 1 9606 Homo sapiens -0.1309002584960126 DYNPYPYSDAINTYDK Unmodified 1937.8319 0.8319382 1818 Q7Z460;Q7Z460-3;Q7Z460-5;Q7Z460-4;Q7Z460-2;A0A8V8TLP7;F8WA11;A0A8V8TQK9;A0A8V8TRF6;H0Y5T1;B7Z4E5;B7Z7Q8;B7Z5R7;Q68D09;B7Z2P0;B7Z7C4;B7Z4J0 CLASP1;DKFZp686D1968 CLIP-associating protein 1 yes no 0 0 0 5.5 0.5 1 1 56.723 56.79 3 5.9093E-06 16584 20230619_1885_Aki_TMTPro18x_K_F5 110.56 100.5 22135 19011 20567 24139 21969 24007 26973 20417 28498 31038 29220 32324 35271 29149 29113 36722 32702 34504 20462 17444 21070 23946 22840 24208 26935 21416 28997 30843 30230 32639 35509 30573 29953 36635 31267 32789 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80856000 5327 1818 5047 10030;10031 8100 8100 1 9606 Homo sapiens -0.09946448777373007 DYPFHEEF Unmodified 1082.4345 0.434526 435 A0A024R7A8;P15121 AKR1B1 Aldose reductase yes no 0 0 0 2 0.816 1 1 1 53.65 53.677 2 0.033633 16033 20230619_1881_Aki_TMTPro18x_K_F2 76.833 71.467 460700 370200 393640 491660 406260 393910 429500 424680 433490 497160 506240 497110 514650 429140 509310 540410 511750 517390 425430 339940 406130 485130 421270 406610 432000 433910 444660 498350 516390 502420 524610 450810 518310 539930 489650 491650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1369500000 5328 435 5048 10032;10033;10034 8101 8101 1 9606 Homo sapiens -0.10339388615807366 DYPLIPVGK Unmodified 1000.5593 0.55933258 1490 B4DWK8;A0A384P5Q0;P04040;Q8TAK2 CAT Catalase yes no 0 0 0 8 0 1 56.672 56.729 2 0.048074 16450 20230619_1888_Aki_TMTPro18x_K_F8 77.282 43.732 59384 50838 52955 54450 62797 72574 68515 65176 91433 65950 68194 74771 70047 62421 74939 76211 79045 80011 54878 46573 54497 54949 64681 71848 69417 67112 90846 66939 71203 75080 71704 65513 76350 76575 75597 75951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35554000 5329 1490 5049 10035 8102 8102 1 9606 Homo sapiens 0.05907528591387745 DYPVVSIEDPFDQDDWGAWQK Unmodified 2509.1074 0.10738478 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2 ENO1 Alpha-enolase;Enolase yes no 0 0 0 4 1.78 1 2 2 2 2 2 1 65.154 65.179 3;4 2.3974E-16 20635 20230619_1882_Aki_TMTPro18x_K_F3 153.21 145.22 94786 77150 95511 91351 79443 99560 101350 96111 94429 109970 116410 126050 124650 100830 121250 129820 114150 127190 87648 70756 96715 91231 84428 99957 100750 98821 97528 110840 118860 126370 126740 106380 123020 129820 109380 120780 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 2001999999.9999998 5330 293 5050 10036;10037;10038;10039;10040;10041;10042;10043;10044;10045;10046;10047 8103;8104;8105;8106 8103 4 9606 Homo sapiens -0.08680461440008003 DYQDLLQVK Unmodified 1120.5764 0.57643921 797 A0A075B7B1;O15061-2;O15061;H0YL34;C9JIE4;O15061-3 SYNM Synemin yes no 0 0 0 6 0 1 58.048 58.117 2 0.0018387 17332 20230619_1886_Aki_TMTPro18x_K_F6 114.97 72.681 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5331 797 5051 10048 8107 8107 1 9606 Homo sapiens 0.02097404406526948 DYQELMNTK Unmodified 1140.5121 0.51212439 2778 H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2;H6VRF9 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 4.5 0.5 1 1 51.392 51.444 2 0.0021393 14400 20230619_1885_Aki_TMTPro18x_K_F5 118.4 56.753 + 19503 16478 24701 33428 342650 38134 118940 33270 56603 24822 28678 27843 32647 118350 31541 27088 28520 39228 18077 15214 29068 32377 321860 39027 130570 34358 60369 25846 30981 31191 33763 113880 31904 29458 27391 37091 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49080000 5332 2778 5052 10049;10050 8108 8108 1 9606 Homo sapiens -0.052511187419213456 DYQGPLK Unmodified 819.41267 0.41266834 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;K7EIE7 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 5.8 0.748 2 2 1 43.819 43.904 2;3 0.028548 11161 20230619_1886_Aki_TMTPro18x_K_F6 101.28 63.151 696060 444930 598610 613970 604060 609650 626900 558420 801610 682600 780020 666820 750920 611160 676010 699460 862010 684670 642000 409130 616230 606000 627720 615740 636130 577690 805410 683140 799150 676150 763760 637080 699030 700660 821740 651110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 729050000 5333 161 5053 10051;10052;10053;10054;10055 8109;8110 8110 2 9606 Homo sapiens -0.004261485736947179 DYQLSEEEAR Unmodified 1238.5415 0.54151026 2968 F5H1A5;Q8IV81;Q12872;Q12872-2 SFSWAP;SFRS8 Splicing factor, suppressor of white-apricot homolog yes no 0 0 0 1 0 1 40.023 40.023 2 1.8439E-13 10103 20230619_1880_Aki_TMTPro18x_K_F1 221.83 150.48 39062 28741 34367 46115 36388 49661 42525 39629 56573 44036 99476 139810 57122 61584 48909 68223 71422 65431 36061 26459 35417 45137 37911 49670 42974 41380 58348 47142 98413 134780 59334 66271 51233 68266 68077 62199 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57810000 5334 2968 5054 10056 8111 8111 1 9606 Homo sapiens -0.06821883192105815 DYQNVPGIEK Unmodified 1161.5666 0.5666028 3763 P82914;B4DYW3;Q59EA6 MRPS15 28S ribosomal protein S15, mitochondrial yes no 0 0 0 5 0 1 48.375 48.451 2 0.0081507 13102 20230619_1885_Aki_TMTPro18x_K_F5 83 43.291 24780 17866 20888 24406 25360 30648 23424 22113 25891 26193 28203 25803 29605 26078 24530 32055 29085 26763 22867 16418 21632 24174 25970 30311 23809 23295 26339 26255 28868 26243 29937 27196 25326 31801 27768 25484 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28119000 5335 3763 5055 10057 8112 8112 1 9606 Homo sapiens -0.007717835988614752 DYQYSDQGIDY Unmodified 1365.5361 0.53609053 3933 Q15417;Q15417-3;Q15417-2 CNN3 Calponin-3 yes no 0 0 0 1.5 0.5 1 1 54.508 54.52 2 5.4673E-06 16362 20230619_1881_Aki_TMTPro18x_K_F2 157.68 146.19 120310 95078 112690 117660 76965 95308 95361 94598 103190 158710 158700 134240 158950 143610 122490 174470 147040 145900 111160 87246 114590 116700 83371 98067 95454 98438 107110 156150 160010 137790 160520 149400 126840 173090 140440 138880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 542850000 5336 3933 5056 10058;10059 8113;8114 8114 2 9606 Homo sapiens -0.1320560677454523 DYSDHPSGGSYR Unmodified 1339.5429 0.54290725 3564;3963 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;B3KRG5;H3BUY5;Q96E39;Q2VIN3 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 0 0 2 0 1 30.281 30.35 3 0.0053348 5855 20230619_1881_Aki_TMTPro18x_K_F2 77.597 65.676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5337 3564;3963 5057 10060 8115 8115 1 9606 Homo sapiens -0.11328249103326016 DYSGQGVVK Unmodified 951.46616 0.46616048 4000 Q59ER5;Q53H17;Q53GN4;A0A8V8TNU2;A0A8V8TNT7;O75083;A0A8V8TP22;A0A8V8TQ74;A0A8V8TQK0;V9HWG7;A0A8V8TP31;B3KXN4;B4DY05;A0A8V8TQ69;O75083-3 WDR1;HEL-S-52 WD repeat-containing protein 1 yes no 0 0 0 6 0 1 41.69 41.785 2 0.00058655 10275 20230619_1886_Aki_TMTPro18x_K_F6 152.79 107.16 77135 53360 93449 106800 144080 150170 123930 122780 131880 109820 136720 144450 138040 120520 115480 78202 153920 154730 71381 49296 94417 103890 144980 147840 126350 126980 134040 112790 140140 144120 139810 122970 119720 83683 146910 146140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128970000 5338 4000 5058 10061 8116 8116 1 9606 Homo sapiens -0.011513958618479592 DYSGYQR Unmodified 887.37735 0.37734547 3890 Q14444-2;Q14444;G3V153;B3KXU8;B4DSF8 CAPRIN1 Caprin-1 yes no 0 0 0 3.5 0.5 1 1 33.529 33.589 2 0.0044471 6941 20230619_1883_Aki_TMTPro18x_K_F4 148.21 114.51 134500 72973 202060 202880 265380 306430 212140 252820 246470 169700 275860 295630 230510 236320 242690 99219 294920 257350 124620 67921 200600 195260 269180 300410 218230 259650 249930 179910 279820 292100 237560 238450 248610 111290 281410 242890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 208160000 5339 3890 5059 10062;10063 8117;8118 8118 2 9606 Homo sapiens -0.07084811101515243 DYSSGFGGK Unmodified 916.39266 0.39266118 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;Q76MU0 CTTN;EMS1 Src substrate cortactin yes no 0 0 0 6 0.707 1 2 1 44.627 44.712 2;3 0.00021545 11198 20230619_1887_Aki_TMTPro18x_K_F7 143.73 95.828 223640 167410 203690 257830 264270 274840 269110 254920 399790 297620 330480 327510 332440 272540 290960 289130 392800 340900 206530 154030 209810 252970 269980 276110 274900 263030 396780 299670 342310 329180 337330 283940 302170 293210 374480 323430 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 352600000 5340 1413 5060 10064;10065;10066;10067 8119;8120;8121 8121 3 9606 Homo sapiens -0.06887944304298799 DYSVTANSK Unmodified 983.45599 0.45598972 1577 P07195;Q5U077;A0A5F9ZHM4;A0A3B3IS95;A8MW50;C9J7H8;F5H793 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 5 0.816 1 1 1 40.342 40.416 2 3.489E-17 9687 20230619_1886_Aki_TMTPro18x_K_F6 250.47 205.3 393420 192390 478510 436840 674400 1123500 483040 627350 790160 300400 534090 667520 500480 548060 583310 235510 678390 662780 363520 178450 482110 429120 683360 1070800 507820 665690 775540 333680 559570 656260 516840 552570 594920 266830 648060 625040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 522970000 5341 1577 5061 10068;10069;10070 8122;8123;8124 8123 3 9606 Homo sapiens -0.036400035870883585 DYTQMNELQR Oxidation (M) 1312.5718 0.57176453 3398 Q7L4Q3;P07203;A0A994J707;A0A994J702;A0A994J430;A0A994J4K6;A0A7I2YMD7;A0A7I2UQ36;P07203-2 GPX1 Glutathione peroxidase;Glutathione peroxidase 1 yes no 0 1 0 3 0 1 37.498 37.551 2 0.0076834 8595 20230619_1882_Aki_TMTPro18x_K_F3 78.516 68.928 19741 13672 22218 20818 27575 31110 25842 31824 30648 27599 30842 34262 33479 31556 27909 28698 39534 36002 18255 12582 22438 20570 28176 30676 26321 32318 30956 28322 31769 34375 33853 32482 29120 29297 37689 34130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13135000 5342 3398 5062 10071 8125 8125 2009 1 9606 Homo sapiens -0.07201847798546623 DYTSGAMLTGELK Unmodified 1384.6544 0.65443153 401 P23381;A0A024R6K8;P23381-2 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 0 0 6 0 1 56.054 56.128 2 0.0011106 16494 20230619_1886_Aki_TMTPro18x_K_F6 94.465 79.799 11630 7842.7 9582.4 10806 7054.5 12589 10723 10191 13749 17415 11808 21825 19065 18581 13794 24754 23999 35220 10727 7209.7 9880.3 10687 7674.3 12526 10691 10774 13791 17344 12589 21815 19009 19606 14747 25319 22941 33300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10054000 5343 401 5063 10072 8126 8126 1 9606 Homo sapiens -0.022509507904032944 DYTSGAMLTGELKK Unmodified 1512.7494 0.74939455 401 P23381;A0A024R6K8;P23381-2 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 0 1 8 0 1 52.586 52.662 3 9.188E-09 14691 20230619_1888_Aki_TMTPro18x_K_F8 135.91 118.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5344 401 5064 10073 8127 8127 1 9606 Homo sapiens 0.013529826807825884 DYTYEELLNR Unmodified 1314.6092 0.6091959 2657 Q6IBR8;B5BU01;P20042;Q96I16 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 3 0.816 1 1 1 54.44 54.468 2 1.6468E-09 15973 20230619_1883_Aki_TMTPro18x_K_F4 204.91 156.87 269420 230180 234800 282930 251070 289680 271870 278560 326820 335520 321990 336050 359200 290580 332040 388250 329410 393380 248930 211140 241950 281440 260320 292150 274640 286880 329820 336030 332330 339610 364010 306500 338310 388680 315650 373350 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 856050000 5345 2657 5065 10074;10075;10076 8128;8129;8130 8130 3 9606 Homo sapiens -0.03552433261279475 DYVAPTANLDQK Unmodified 1333.6514 0.65139506 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 0 4.67 0.471 1 2 48.682 48.745 2;3 2.9585E-09 13396 20230619_1883_Aki_TMTPro18x_K_F4 208.56 175.15 210770 170680 174980 202500 206100 223910 217540 217190 288180 261830 266460 273990 259410 218290 248780 302180 277250 284150 194610 156540 181370 202170 212110 224690 220810 223540 288680 262640 274140 275730 264500 231420 255040 301140 265050 270050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 372790000 5346 1229 5066 10077;10078;10079 8131;8132 8131 2 9606 Homo sapiens -0.0020845785290930507 DYVAQFEASALGK Unmodified 1397.6827 0.68269519 2781 CON__P15497 yes yes 0 0 0 6.5 0.5 1 1 62.292 62.335 3 5.8926E-06 18849 20230619_1887_Aki_TMTPro18x_K_F7 122.52 117.07 + 405230 483100 646500 415340 702540 881130 683450 695660 841940 763090 1112600 1301600 722250 833900 1237300 822210 951410 1527000 377620 441360 636320 431880 725170 851420 695510 724920 858400 783920 1113800 1280000 775060 874700 1231300 867000 917050 1440700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 837230000 5347 2781 5067 10080;10081 8133;8134 8134 2 -0.00023884818801889196 DYVAVAR Unmodified 792.413 0.41300269 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4 0.816 1 1 1 38.458 38.521 2 0.0077204 8915 20230619_1885_Aki_TMTPro18x_K_F5 122.98 45.605 437860 312150 394090 419100 517180 508570 452700 493430 728580 504940 564520 568170 561960 490340 512080 479540 658180 579040 404220 286800 405870 415570 525910 507210 468610 505260 719400 512130 586690 571130 571560 507870 529410 487810 627780 549210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 474220000 5348 3758 5068 10082;10083;10084 8135;8136 8136 2 9606 Homo sapiens 0.00849271146148567 DYVDLFR Unmodified 926.44978 0.44978213 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5 0 1 57.863 57.922 2 0.0042703 17042 20230619_1885_Aki_TMTPro18x_K_F5 149.4 112.02 282920 236090 253950 294880 270630 340140 302480 304690 468740 356280 341510 292870 291900 284430 334390 321540 305980 322080 261420 216620 260940 293490 281360 339590 308130 315040 462670 355730 353910 299990 301780 295560 337660 322630 293140 305850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159080000 5349 3758 5069 10085 8137 8137 1 9606 Homo sapiens -0.01638477027938734 DYVIEDDVNMAIR Oxidation (M) 1567.7188 0.7188227 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5;Q9BWF4 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 1 0 1.5 0.5 1 1 54.982 54.993 3 0.0097766 16568 20230619_1881_Aki_TMTPro18x_K_F2 64.313 49.623 51658 46257 51296 51412 38460 53198 48417 47589 63924 59128 48793 57146 64893 44264 56886 65214 53462 62874 47792 42384 51955 51539 41344 53522 48731 49324 63667 59091 51536 57638 65265 47244 57846 65037 51250 59708 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110740000 5350 2702 5070 10086;10087 8138 8138 1622 1 9606 Homo sapiens -0.04232795704274395 DYVQEVTK Unmodified 980.48148 0.48147619 4501 Q9H2J4;H7BZP2;B7Z6S0;C9JST4 PDCL3 Phosducin-like protein 3 yes no 0 0 0 3.33 0.471 2 1 46.16 46.22 2 0.0027143 12260 20230619_1883_Aki_TMTPro18x_K_F4 122.33 69.163 106610 77867 96603 105990 124040 135060 121560 112620 172940 127880 153050 140060 147400 122240 130510 146430 161230 141680 98438 71547 99438 105060 126710 133840 124230 117030 172300 128930 157590 141110 149830 127960 134780 146460 153830 134690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182170000 5351 4501 5071 10088;10089;10090 8139;8140 8140 2 9606 Homo sapiens -0.009545290646542526 DYYFALAHTVR Unmodified 1354.667 0.66698555 1055;2254 B4DRW6;B2RB32;A0A0M4FEM1;P11217;P11217-2;Q6P1L4;E9PK47;B2R825;P06737-2;P06737 PYGM;PYGL Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, muscle form;Glycogen phosphorylase, liver form no no 0 0 0 2 0.816 1 1 1 51.648 51.685 3 0.00046929 15149 20230619_1881_Aki_TMTPro18x_K_F2 83.617 68.931 24814 21245 26361 24414 19495 26846 23417 23895 28805 22682 22000 26088 23615 20025 29660 26888 27546 24945 22963 19475 26538 24437 20944 26885 23563 24587 28753 23102 23007 26117 24341 21213 29920 26812 26358 23723 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58991000 5352 1055;2254 5072 10091;10092;10093 8141 8141 1 9606 Homo sapiens 0.0038387345477985946 DYYINIR Unmodified 955.47633 0.47633123 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 6.5 0.5 1 1 48.952 49.034 2 0.0075463 13500 20230619_1886_Aki_TMTPro18x_K_F6 132.96 105.84 424790 370410 400340 421020 424570 467020 438660 425340 526720 539510 528080 518270 555900 445680 475180 571580 570290 570120 392760 339490 409190 421720 439620 467940 444240 440480 531910 538510 542820 524650 562530 468960 490390 571990 544730 541520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 877800000 5353 3246 5073 10094;10095 8142;8143 8142 2 9606 Homo sapiens -0.003187881366216061 DYYQTLGLAR Unmodified 1198.5982 0.59823728 3503 Q6FI51;Q6FHS4;P25685;M0QXK0;B4DKK9 DNAJB1 DnaJ homolog subfamily B member 1 yes no 0 0 0 7.5 0.5 1 1 52.607 52.68 2 0.00033158 14694 20230619_1888_Aki_TMTPro18x_K_F8 151.83 134.26 184090 151920 156890 185210 195980 261100 196540 205140 262590 118100 114240 113120 115630 98076 166620 138250 138710 124430 170020 139360 162460 185220 201030 256820 200050 211070 257420 124200 124360 114690 120460 103780 166830 137610 132890 118380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 376920000 5354 3503 5074 10096;10097 8144 8144 1 9606 Homo sapiens 0.006882091551005942 EAAAALVEEETRR Unmodified 1443.7318 0.73177065 2250 Q53HE3;B2R7W3;O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes no 0 0 1 2.5 0.5 1 1 45.615 45.694 3 0.03463 12414 20230619_1881_Aki_TMTPro18x_K_F2 50.94 22.735 723490 515480 680170 724880 725630 1028900 697990 711030 1264300 881210 962160 918320 980000 822510 787560 885620 1059400 992540 668120 473860 695700 718290 752520 1009200 722660 752760 1242600 883980 1001300 927300 990810 855190 819710 894710 1010500 941830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 663870000 5355 2250 5075 10098;10099 8145 8145 1 9606 Homo sapiens 0.027654034701072305 EAAALGSR Unmodified 773.40317 0.40316629 502 A0A024R883;O75348 ATP6V1G1 V-type proton ATPase subunit G 1 yes no 0 0 0 3 0 1 32.86 32.932 2 0.013689 6737 20230619_1882_Aki_TMTPro18x_K_F3 87.476 42.395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5356 502 5076 10100 8146 8146 1 9606 Homo sapiens 0.007400831407608166 EAAASGLPLMVIIHK Unmodified 1548.8698 0.86978446 3365 O95881 TXNDC12 Thioredoxin domain-containing protein 12 yes yes 0 0 0 2 0 1 61.361 61.371 3 4.6538E-14 19199 20230619_1881_Aki_TMTPro18x_K_F2 178.67 130.03 61111 57031 55280 50884 42798 61620 55020 65327 57560 65118 64043 70597 81587 59859 78130 73922 70110 78661 56512 52155 56440 52107 45895 61583 54905 66430 58806 65951 66236 71047 82463 62895 79044 74338 67218 74631 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 521020000 5357 3365 5077 10101 8147 8147 1 9606 Homo sapiens 0.11730435465074152 EAAATEIR Unmodified 859.43995 0.43994572 3668 P56545;P56545-3;P56545-2 CTBP2 C-terminal-binding protein 2 yes no 0 0 0 1.5 0.5 1 1 33.745 33.773 2 0.0076448 7483 20230619_1880_Aki_TMTPro18x_K_F1 107.01 34.774 72530 32718 87688 94981 118770 132490 81830 101060 117550 84594 128770 158430 109220 106120 118890 52134 139280 143540 66995 30518 88307 91126 119970 130260 85840 104950 118030 88669 130940 155470 112640 108360 121470 58605 133090 135350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57867000 5358 3668 5078 10102;10103 8148;8149 8148 2 9606 Homo sapiens 0.004603349666808754 EAAATEIRR Unmodified 1015.5411 0.54105675 3668 P56545;P56545-3;P56545-2 CTBP2 C-terminal-binding protein 2 yes no 0 0 1 3.67 0.471 1 2 29.413 29.499 3 1.431E-07 5376 20230619_1883_Aki_TMTPro18x_K_F4 150.27 51.809 74661 51337 86430 78031 109910 98648 81777 94944 95849 74513 110090 105580 89342 79839 94794 51274 114720 101260 69058 47243 87076 76873 111360 98123 84604 96669 97316 77356 111350 104850 92130 81736 97141 54935 109480 95696 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 169970000 5359 3668 5079 10104;10105;10106 8150;8151;8152 8152 3 9606 Homo sapiens 0.03390786669388035 EAAAVAPPER Unmodified 1009.5193 0.51925868 4395 Q96SB3 PPP1R9B Neurabin-2 yes yes 0 0 0 2 0 1 35.053 35.109 2 0.0087873 7719 20230619_1881_Aki_TMTPro18x_K_F2 95.523 80.372 59867 36828 66437 65308 75253 95837 71407 79037 88851 74438 98717 102380 103630 88644 91952 54246 102030 101320 55321 33979 67083 63960 77475 94117 72800 81750 89856 76365 101050 102110 105040 90130 94044 57840 97515 95737 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66941000 5360 4395 5080 10107 8153 8153 1 9606 Homo sapiens 0.014879819208090339 EAADGYQR Unmodified 908.39881 0.39880919 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;H0YGI8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 1.5 0.5 1 1 29.748 29.783 2 0.00099017 5935 20230619_1880_Aki_TMTPro18x_K_F1 170.87 104.97 25431 9282.7 41624 42390 59261 64058 36364 64329 38137 21895 56283 63596 27126 42097 54490 7916.6 61593 55761 23558 8787.4 41194 40302 59493 63044 38158 64486 39362 25648 55706 61885 30039 42277 55054 11341 58822 52477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39760000 5361 2088 5081 10108;10109 8154 8154 1 9606 Homo sapiens -0.059054260727975816 EAADMLK Unmodified 776.37384 0.37383999 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;A0A8V8TQT5;A0A994J3G5;O00429-7;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402 DNM1L Dynamin-1-like protein no no 0 0 0 3.5 0.5 1 1 45.95 45.994 2 0.023523 12165 20230619_1883_Aki_TMTPro18x_K_F4 100.45 0 151730 111540 142390 190730 190250 182080 180240 176050 259630 177660 184660 168020 178790 152140 168320 131050 239900 164880 140140 102770 146400 185790 193500 184610 184650 180380 256780 179370 192600 170400 182290 156430 175040 134080 228330 156520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38049000 5362 3212;3213 5082 10110;10111 8155;8156 8156 2 9606 Homo sapiens -0.0232919719973097 EAADPLASK Unmodified 900.45526 0.45526144 3646 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 3.5 0.5 1 1 44.605 44.663 2 0.0039153 11518 20230619_1883_Aki_TMTPro18x_K_F4 108.43 4.4194 207070 123030 175490 177420 229920 251130 233870 249220 347600 264200 323500 330410 331680 298070 295400 257450 412370 369080 190900 113230 181740 175640 234890 248220 239020 255000 346370 268420 333380 331210 336770 306460 307220 265770 393120 349530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 360630000 5363 3646 5083 10112;10113 8157;8158 8158 2 9606 Homo sapiens 0.001052017638471625 EAAEEKEEEPEAEEEEVAAK Unmodified 2244.9758 0.97576149 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7;P07197-2;Q9UK51 NEFM;NEF3 Neurofilament medium polypeptide yes no 0 0 1 1 0 1 45.626 45.626 3 4.744E-17 12548 20230619_1880_Aki_TMTPro18x_K_F1 168.64 143.74 74509 58232 64667 62205 33899 47679 28983 27469 37432 76197 127210 153610 88895 116510 112720 103610 141700 171190 68802 53364 66003 62326 37653 48884 29929 30871 41245 76688 124810 151040 93346 120580 115760 108130 135500 161770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48615000 5364 1958 5084 10114 8159 8159 1 9606 Homo sapiens -0.09692736318356765 EAAEGLGSHER Unmodified 1154.5316 0.53161428 4021 Q59EF6;B4E1R7;B2RCM3 yes no 0 0 0 1 0 1 29.292 29.292 3 7.7866E-10 5714 20230619_1880_Aki_TMTPro18x_K_F1 191.33 156.57 9150.4 6476.6 7005.9 9636.2 13843 14049 12892 11359 17870 11543 12713 13677 14105 11413 13495 8121.8 17549 16365 8437.6 5957.9 7415.3 9518.9 13816 13808 13189 11797 17700 11738 13355 13696 14325 11689 13925 8693.1 16743 15461 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14052000 5365 4021 5085 10115 8160 8160 1 9606 Homo sapiens -0.03947026406808618 EAAEIYR Unmodified 850.41848 0.418482 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 2 0 1 37.378 37.438 2 0.0085426 8658 20230619_1881_Aki_TMTPro18x_K_F2 120.52 54.384 137670 104890 120610 132060 154170 165290 135580 140150 242730 170120 184200 165440 176980 132340 144670 141010 189580 161170 127110 96281 124500 131540 157210 164060 141030 145680 238650 170380 191200 167010 179260 138200 150110 142720 180760 152970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192240000 5366 2297 5086 10116 8161 8161 1 9606 Homo sapiens -0.012710500620414678 EAAEMGK Unmodified 734.32689 0.3268898 1560;3997;1378 Q05639;A0A2U3TZH3;A0A2R8Y488;A0A2R8Y660;A0A2R8YDN5;Q6NSH7;A0A4D5RAE1;A0A4D5RA53;A0A4D5RA40;A0A4D5RA74;A0A4D5RAA6;A0A4D5RAC3;A0A4D5RAB4;A0A4D5RAB0;P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A8K9C4;A0A4D5RAC9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;Q53G89;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q9H2I7;A0A4D5RA52;A0A087WV01;Q9NZS6;A0A4D5RA61;A0A4D5RBK4;A0A4D5RAF1;A0A4D5RBI9;A0A4D5RBD4;A0A4D5RBH1;A0A4D5RA69;A6PW80;A0A4D5RBL9;Q5JR01;A0A4D5RAA9;Q53GE9 EEF1A2;EEF1A1;EEF1A1P5 Elongation factor 1-alpha 2;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 2.5 0.5 1 1 37.88 37.938 2 0.023523 8871 20230619_1881_Aki_TMTPro18x_K_F2 100.45 58.949 159470 101110 265130 241220 423570 349640 234820 442630 228540 144110 316990 375320 169500 239860 353230 108970 310350 275090 148060 93733 262550 233430 421120 347350 248270 437110 236270 168350 315330 365730 186960 244550 352210 121770 297110 259650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155200000 5367 1378;1560;3997 5087 10117;10118 8162;8163 8162 2 9606 Homo sapiens -0.05090056750873373 EAAENSLVAYK Unmodified 1193.5928 0.59281755 3709 V9HW98;P62258;G9K389;G9K388;P62258-2;B7ZA86;K7EM20 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 0 0 4 0.816 1 1 1 49.012 49.076 3 6.8769E-05 13566 20230619_1883_Aki_TMTPro18x_K_F4 109.24 93.48 1860400 1341100 1602700 1651100 1722900 1862200 1603000 1803000 2131800 2157000 2190500 2527900 2320800 1702900 1904300 2636300 2536900 2489800 1717000 1231000 1651300 1645000 1778300 1865900 1640600 1855000 2145200 2171500 2252100 2520900 2343500 1833800 1982700 2623700 2420800 2366600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2973299999.9999995 5368 3709 5088 10119;10120;10121 8164;8165;8166 8165 3 9606 Homo sapiens 0.003764855726103633 EAAEVLQNNRR Unmodified 1298.6691 0.66911081 305 A0A024R4T4;P61081;M0QX69 UBE2M NEDD8-conjugating enzyme Ubc12 yes no 0 0 1 4.5 0.5 1 1 34.466 34.535 3 3.9415E-06 7341 20230619_1885_Aki_TMTPro18x_K_F5 145.55 108.21 51965 43688 49877 57211 71496 57988 58786 60475 79524 64811 75456 70322 70939 53964 63331 72705 83051 68673 48043 40103 51180 56668 72086 58690 60646 61728 79639 65454 77359 70620 72162 57213 65667 72508 79173 65321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196280000 5369 305 5089 10122;10123 8167 8167 1 9606 Homo sapiens 0.03172302192592724 EAAFSLAEAK Unmodified 1035.5237 0.52367535 384 Q9H3H0;A0A024R683;Q9Y5K8;G3V2S6;Q8N5Z9;Q9NW63;G3V559;H0YJ55;G3V3T8;H0YJS0;G3V5S7 VATD;ATP6V1D V-type proton ATPase subunit D yes no 0 0 0 4.33 0.471 2 1 52.753 52.8 2 8.7458E-06 15285 20230619_1883_Aki_TMTPro18x_K_F4 147.95 131.17 76195 67205 70827 75811 64043 79774 79307 77073 96974 91982 96059 98070 103170 84442 93596 108930 101430 119110 70448 61589 72337 75926 67575 80304 79629 79337 97743 92361 98922 98838 104600 88882 95867 109580 97093 112960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98369000 5370 384 5090 10124;10125;10126 8168;8169 8168 2 9606 Homo sapiens 0.007334463437246086 EAAGEGPALYEDPPDQK Unmodified 1785.8057 0.80572345 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1;G3V3C7;A0A0C4DGK8;G3V5M0;G3V359;G3V5D9;G3V3Y6 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 0 1.75 0.829 2 1 1 48.472 48.508 3;4 5.4909E-24 13721 20230619_1880_Aki_TMTPro18x_K_F1 212.39 200.25 307710 238050 271150 284570 287730 299410 316150 284240 337550 316290 342440 357520 387960 317450 358410 414660 366840 409300 284150 218380 278800 283810 298250 301390 317750 292440 342860 319250 353260 359860 393010 333950 365770 414650 351200 388650 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1837099999.9999998 5371 3515 5091 10127;10128;10129;10130 8170;8171;8172;8173 8170 4 9606 Homo sapiens -0.05574717948866237 EAAGGNDSSGATSPINPAVALE Unmodified 2026.9443 0.9443422 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;Q7Z2J6;H3BLW5 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 2 0.816 1 1 1 59.177 59.191 3 1.5215E-05 18070 20230619_1882_Aki_TMTPro18x_K_F3 72.015 56.761 48719 44085 39436 46636 39719 51252 50573 54556 57487 58162 58688 53322 57342 52681 64364 57880 59345 63037 45008 40374 40895 46966 41612 51548 50583 55580 58224 58437 60085 54347 58918 54639 65014 58394 56855 59804 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88970000 5372 2005 5092 10131;10132;10133 8174;8175 8175 2 9606 Homo sapiens -0.028052197711531335 EAAGTTAAAGTGGATEQPPR Unmodified 1812.8602 0.86021864 3252 O43290;E9PQI8;B4DP43 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 0 3 0 1 34.788 34.849 3 6.2099E-37 7485 20230619_1882_Aki_TMTPro18x_K_F3 233.63 216.88 9546.7 6417.9 6466.5 8250.6 9620 9495.8 7122.4 10214 15041 9003.9 11398 11826 9495.7 8569 8852.3 9407.1 12990 10328 8794.2 5895.6 6879.7 8196.3 9693.1 9525.4 7573 10343 14707 9259.9 11780 11766 9731.2 8987.2 9243.1 9491.1 12370 9809.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140580000 5373 3252 5093 10134 8176 8176 1 9606 Homo sapiens -0.013697060774347847 EAAHLLNDALSIR Unmodified 1421.7627 0.76267685 740 A0A024RCZ8;Q9NSK0;Q9NSK0-3;Q9NSK0-5;C9J8T5;Q9NSK0-4 KLC4 Kinesin light chain 4 yes no 0 0 0 7 0 1 56.255 56.313 3 0.080149 16220 20230619_1887_Aki_TMTPro18x_K_F7 38.376 13.584 56072 13057 30038 48468 41153 24341 51383 56244 66790 60283 64549 60639 78201 58321 35465 82870 37254 71575 51417 12334 32938 45658 42062 27161 51667 55362 67065 60702 66832 61537 77275 61557 37196 82100 35864 67976 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147230000 5374 740 5094 10135 8177 8177 1 9606 Homo sapiens 0.06866601575029563 EAALGAGFSDK Unmodified 1064.5138 0.51383895 3658 P55084-2;P55084;B4DY96;B5MD38;F5GZQ3;B4DDC9;D6W539;C9JEY0;C9JE81;Q92799 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 4.5 0.5 1 1 49.119 49.176 2 3.1904E-09 13561 20230619_1883_Aki_TMTPro18x_K_F4 190.86 135.18 200490 155930 169420 196640 284770 284330 291630 263540 333550 256820 287730 304820 299140 258380 263890 319170 316260 285410 185090 143120 176620 196340 286700 280420 294660 270480 335380 261540 297970 305760 303370 271140 272140 317740 301880 271560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 427350000 5375 3658 5095 10136;10137 8178 8178 1 9606 Homo sapiens -0.015837416616705013 EAALILGVSPTANK Unmodified 1382.7769 0.77692993 1145 A0A0S2Z5X1;Q96DA6;A0A8I5KQT8;Q96DA6-2 DNAJC19 Mitochondrial import inner membrane translocase subunit TIM14 yes no 0 0 0 4.5 3.5 1 1 58.281 58.305 3 0.00063073 17113 20230619_1888_Aki_TMTPro18x_K_F8 87.233 61.086 192420 198880 223680 205080 230540 271710 265010 253940 269850 178800 162580 138930 166860 131190 252070 168740 149590 157570 178460 182030 224670 207630 239830 269300 265280 258600 270120 183680 172120 142740 174080 137650 248710 168610 144170 149750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 173330000 5376 1145 5096 10138;10139 8179;8180 8180 2 9606 Homo sapiens 0.10085254003342925 EAALSTALSEK Unmodified 1118.5819 0.58191851 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80;A0A6Q8PGH0 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 4.8 0.748 2 2 1 52.125 52.179 2;3 5.1399E-06 14960 20230619_1883_Aki_TMTPro18x_K_F4 182.28 125.11 979500 773960 765320 1070500 1264000 1387600 1272600 1282600 1945200 1320800 1441100 1513400 1465500 1325900 1213100 1531900 1498900 1631100 903880 711040 804840 1060000 1275400 1376300 1302000 1318400 1921500 1340200 1503300 1521400 1483900 1384400 1255600 1540700 1432300 1547700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1884099999.9999998 5377 1428 5097 10140;10141;10142;10143;10144 8181;8182;8183 8181 3 9606 Homo sapiens 0.027370831983262178 EAALVQQEEEK Unmodified 1272.6198 0.61976058 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DYA2;B4DRG9;B4E3R6 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 0 1.5 0.5 1 1 45.228 45.269 3 4.0601E-05 12400 20230619_1880_Aki_TMTPro18x_K_F1 134.13 108.66 111390 79008 98220 119160 133030 121730 118370 129040 164120 126440 155060 143230 155200 144310 136830 142710 183660 158030 102810 72692 101480 117010 134950 123090 121620 131240 164120 128530 159420 144760 157650 148700 142060 144300 175090 150030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218620000 5378 1555 5098 10145;10146 8184 8184 1 9606 Homo sapiens -0.005644506068620103 EAAPDAGAEPITADSDPAYSSK Unmodified 2161.9651 0.96513722 2414 B3KTJ9;Q8N163-2;Q8N163;E5RHJ4 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 1 0 1 48.863 48.863 3 2.1993999999999998E-23 13885 20230619_1880_Aki_TMTPro18x_K_F1 179.58 171.4 52622 39801 39135 49141 47236 54321 56013 56901 56017 63477 59908 59795 68628 53792 57368 73257 63926 65681 48532 36528 41069 48921 48697 54589 55961 58114 57276 63664 61662 60687 69201 56730 58985 72832 61113 62458 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135640000 5379 2414 5099 10147 8185 8185 1 9606 Homo sapiens -0.06936674182179559 EAAQLREER Unmodified 1100.5574 0.5574351 2288;2925 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;H0YE58;P29692;P29692-3;E9PK01;P29692-4;E9PQZ1;E9PI39;E9PQ49;E9PL71 EEF1D Elongation factor 1-delta no no 0 0 1 1 0 1 29.227 29.227 3 0.00012929 5654 20230619_1880_Aki_TMTPro18x_K_F1 139.39 88.117 33865 16224 28699 33388 46693 63300 34491 40032 73521 42000 53660 72912 70694 70011 38735 38595 89886 93143 31194 15025 29893 32636 46945 61133 36668 42536 71807 43393 56803 72403 70222 70679 42760 42347 85530 87878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133670000 5380 2288;2925 5100 10148 8186 8186 1 9606 Homo sapiens 0.011178678354781368 EAASILQELQVETYGSMEK Unmodified 2125.0249 0.024900707 1088 A0A0S2Z489;O00232-2;O00232;A0A0S2Z476 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 5 0 1 64.423 64.467 3 5.5264E-05 19951 20230619_1885_Aki_TMTPro18x_K_F5 88.264 78.476 20601 15563 15406 18104 17506 21123 22035 22410 18506 22491 25359 24611 18616 23263 26506 23315 24270 36457 19000 14275 16136 18117 18153 21156 21849 22803 19330 22777 25414 24845 19634 24033 26678 24170 23327 34443 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52202000 5381 1088 5101 10149 8187 8187 1 9606 Homo sapiens 0.007389252275061153 EAASQRPLSSSASNR Unmodified 1559.7652 0.76519604 895 H0YJP0;A0A8I5QJU2;A0A087X2H1;Q9ULT8;Q2KQ74 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes no 0 0 1 6 0 1 27.914 27.946 3 0.04795 5045 20230619_1886_Aki_TMTPro18x_K_F6 46.964 32.707 2380.7 1484.3 2193.6 1894.8 1892.8 3161.8 2527.1 2558.1 2727.2 2608.5 2927.5 2211.6 3473.6 2606.5 1377.9 3081.7 3907.1 1580 2196.7 1363.9 2239.1 1896.6 2015.8 3083.7 2518.1 2654.5 2774.4 2623 3009.9 2280.8 3428.3 2700.2 1585.9 3000.9 3697.7 1525.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17312000 5382 895 5102 10150 8188 8188 1 9606 Homo sapiens 0.007704052420649532 EAATLEVERPLPMEVEK Oxidation (M) 1955.9874 0.98739299 2314 B2RDE8;A0A384NPW1;P51858;A8K8G0;B7Z958;B7Z525;P51858-2;P51858-3 HDGF Hepatoma-derived growth factor yes no 0 1 1 3.5 1.12 1 1 1 1 49.308 49.371 3 8.7615E-07 13659 20230619_1883_Aki_TMTPro18x_K_F4 118.47 93.148 579530 477400 535340 654850 709830 667260 654180 597660 640460 677940 729780 678250 706110 602980 662710 756280 667900 731130 535560 438480 550690 646560 721020 672440 662360 617850 657160 680830 743230 686310 719270 632550 675510 755870 639430 694470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1715399999.9999998 5383 2314 5103 10151;10152;10153;10154 8189;8190 8190 1424 2 9606 Homo sapiens 0.047638787525556836 EAATLEVERPLPMEVEK Unmodified 1939.9925 0.99247837 2314 B2RDE8;A0A384NPW1;P51858;A8K8G0;B7Z958;B7Z525;P51858-2;P51858-3 HDGF Hepatoma-derived growth factor yes no 0 0 1 4 0.816 1 1 1 53.515 53.563 3 4.2551E-10 15590 20230619_1883_Aki_TMTPro18x_K_F4 144.01 115 1041400 876950 996710 1118900 981340 1304800 1104600 1125200 1265800 1388900 1268400 1307300 1439400 1234100 1049900 1476500 888890 1506300 962750 804770 1017000 1112200 1025900 1300600 1111900 1168800 1281700 1387100 1308600 1328200 1444700 1288400 1068200 1480300 856320 1428100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6066399999.999999 5384 2314 5103 10155;10156;10157 8191;8192 8191 2 9606 Homo sapiens 0.060081826151645146 EAATQAQQTLGSTIDK Unmodified 1660.8268 0.82679325 2024 Q53HS0;A8K3A8;P47897-2;P47897;B4DNN3;C9J165;A0A0U1RQT0;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;F2Z2V6;B7Z840;I3QNU8 QARS Glutamine--tRNA ligase yes no 0 0 0 5.5 0.5 1 1 49.774 49.85 3 0.00047173 13871 20230619_1886_Aki_TMTPro18x_K_F6 68.481 57.846 50968 48507 47763 55582 51620 63971 64662 53429 67115 49511 65408 62811 62789 55129 60304 73491 64028 70165 47152 44448 48912 55653 53713 63801 64479 55257 68071 50699 67065 62971 64063 58066 61648 73330 61268 66656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 287510000 5385 2024 5104 10158;10159 8193 8193 1 9606 Homo sapiens 0.02281292150655645 EAAWAITNATSGGSAEQIK Unmodified 1903.9276 0.92756992 3632 Q5BKZ2;P52294;B3KXZ2;B3KWR2 KPNA1 Importin subunit alpha;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes no 0 0 0 7 0 1 55.844 55.905 3 1.1872E-07 16113 20230619_1887_Aki_TMTPro18x_K_F7 115.2 95.106 42145 39500 45675 44137 38794 50933 48716 51762 62219 61950 52177 48890 62434 51779 55644 68319 63156 62130 39033 36189 46005 44306 41180 50997 48972 53066 62254 61677 54433 50349 63078 54205 57186 68003 60347 59081 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55662000 5386 3632 5105 10160 8194 8194 1 9606 Homo sapiens 0.011763241334847407 EAAWAITNATSGGTPEQIR Unmodified 1971.965 0.96501806 2495 B4DII5;B4DWX3;O60684 KPNA6 Importin subunit alpha;Importin subunit alpha-7 no no 0 0 0 6 0 1 54.13 54.207 3 1.0919E-11 15717 20230619_1886_Aki_TMTPro18x_K_F6 126.07 104.84 42434 41681 46955 41812 38929 46207 44624 52747 52443 46591 48653 39728 52805 49547 47977 50247 56417 46112 39321 38146 47172 42324 41246 46552 44947 53232 52819 47222 50218 41028 53573 50805 49343 50255 53826 43879 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 419000000 5387 2495 5106 10161 8195 8195 1 9606 Homo sapiens 0.017914153990886916 EAAYHPEVAPDVR Unmodified 1452.6997 0.69974224 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 2.5 0.5 1 1 38.207 38.265 3 6.8176E-09 8871 20230619_1882_Aki_TMTPro18x_K_F3 142.38 120.19 118150 92807 111350 120030 128700 147710 140160 139810 170310 153780 162820 157940 164670 147130 147530 168030 177070 166870 109180 85203 114010 119330 132720 147050 141570 143720 171460 154850 167440 159820 167270 153200 152060 168410 169060 158550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 382360000 5388 1292 5107 10162;10163 8196;8197 8197 2 9606 Homo sapiens -0.008499642130118445 EACFAVEGPK Unmodified 1106.5066 0.50664508 2776 CON__P02769 yes yes 0 0 0 4.8 0.748 2 2 1 48.007 48.069 2;3 3.8554E-05 12938 20230619_1885_Aki_TMTPro18x_K_F5 150.85 120.28 + 104030 188870 241110 120090 609420 719270 364300 314360 586870 232100 229390 278290 157110 208050 206160 235020 349640 450370 97976 172080 238450 134800 597740 672510 387730 346450 570180 241580 249350 277890 165910 218380 216880 247580 333840 425110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1509899999.9999998 5389 2776 5108 10164;10165;10166;10167;10168 8198;8199 8199 2 9606 Homo sapiens -0.04234797533740675 EACGVIVELIK Unmodified 1229.669 0.66895938 1442 B5BUB1;A0A384MTR5;Q9Y265;Q9Y265-2 RUVBL1 RuvB-like 1 yes no 0 0 0 7 0 1 62.089 62.125 3 0.00076769 18774 20230619_1887_Aki_TMTPro18x_K_F7 79.82 62.011 47264 43665 45937 54216 62980 53418 63122 60037 76599 57975 65986 56373 60742 53586 60868 61148 55552 61118 43729 40047 47069 53876 63960 54273 64019 60832 76783 58689 67911 57255 62172 55764 61605 61331 53242 58030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288320000 5390 1442 5109 10169 8200 8200 1 9606 Homo sapiens 0.0633116614840219 EACPELDYFVVFSSVSCGR Unmodified 2220.982 0.98199003 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 6.67 0.471 1 2 64.566 64.6 2;3 1.7241E-14 19889 20230619_1887_Aki_TMTPro18x_K_F7 149.86 145.51 53001 32658 62557 47256 50920 57803 58749 51832 80284 53215 54301 69840 66988 71970 68466 77715 78427 85848 49006 30052 62486 46681 54045 57495 59438 53426 79458 54298 57616 70205 68170 74404 70196 78435 74994 81426 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 195940000 5391 3606 5110 10170;10171;10172 8201;8202 8201 2 9606 Homo sapiens -0.07966168101620497 EACWTISNITAGNR Unmodified 1591.7413 0.74128948 2495;3632 B4DII5;B4DWX3;O60684;Q5TFJ7;Q5BKZ2;P52294;B3KXZ2;B3KWR2 KPNA6;KPNA1 Importin subunit alpha;Importin subunit alpha-7;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed no no 0 0 0 8 0 1 53.863 53.934 2 1.3729999999999998E-21 15249 20230619_1888_Aki_TMTPro18x_K_F8 224.42 209.86 119600 105810 123350 129490 104890 135400 124720 124120 150680 154770 136470 127020 167390 133490 142550 178040 150490 159880 110680 97040 124770 128910 111120 136180 125440 128400 151570 153970 141970 130510 168630 139900 146030 177070 143970 152020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 268610000 5392 2495;3632 5111 10173 8203;8204 8203 2 9606 Homo sapiens -0.03091151516014179 EADASPASAGICR Unmodified 1303.5827 0.58266357 3143 J3QL54;Q9BW27-3;Q9BW27;Q9BW27-2;J3QLD4;J3QLV0;B7Z3C2;B4DYG7 NUP85 Nuclear pore complex protein Nup85 yes no 0 0 0 2.5 0.5 1 1 37.014 37.071 2 1.0036E-20 8377 20230619_1882_Aki_TMTPro18x_K_F3 221.5 203.19 80783 61853 67719 72210 76496 84793 77085 79681 99871 96031 96586 87378 106850 82044 77168 106570 130700 107920 74568 56733 70033 72250 78854 84683 78400 82166 100350 95937 99593 88970 107320 86164 82094 106680 124370 102570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94377000 5393 3143 5112 10174;10175 8205;8206 8206 2 9606 Homo sapiens -0.056984454242638094 EADDIVNWLK Unmodified 1201.5979 0.59790293 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;B4DNL5;A0A7P0T8J3;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;A0A7P0Z4J0;B4DJS0;A0A7P0Z4S2;A0A7P0TAX9 P4HB Protein disulfide-isomerase yes no 0 0 0 4.5 1.12 1 1 1 1 62.841 62.874 3 0.0017372 19419 20230619_1886_Aki_TMTPro18x_K_F6 73.885 50.509 34126 27252 35767 34284 31758 42896 36791 37609 46818 46567 35695 41474 43313 34043 42758 44532 37399 43585 31563 25010 36137 34161 33513 42580 37118 39013 46723 46432 37529 42046 43916 35934 43205 44525 35878 41384 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 596650000 5394 537 5113 10176;10177;10178;10179 8207 8207 1 9606 Homo sapiens 0.005167894352325675 EADEDAVQFANR Unmodified 1363.6004 0.60042213 4186 Q8NDD3;Q86UL3 DKFZp586M1819;AGPAT6 Glycerol-3-phosphate acyltransferase 4 yes no 0 0 0 1 0 1 43.238 43.238 2 4.3921E-19 11526 20230619_1880_Aki_TMTPro18x_K_F1 242.59 30.379 84301 63565 69186 80965 66886 75140 73678 65710 82378 93275 96927 87789 95316 79052 81436 109430 97421 98297 77797 58357 71569 80237 69897 76218 74176 68568 84058 92620 98614 89131 96665 83439 84095 108770 93064 93478 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60409000 5395 4186 5114 10180 8208 8208 1 9606 Homo sapiens -0.06683406897741406 EADEMHTLLQLECEK Oxidation (M) 1860.8234 0.82336413 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7;B3KWP6;B7Z6P3;G3V5P0 KTN1 Kinectin yes no 0 1 0 1 0 1 51.66 51.66 3 0.051777 15031 20230619_1880_Aki_TMTPro18x_K_F1 46.926 35.312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5396 380 5115 10181 8209 8209 233 1 9606 Homo sapiens -0.07261462009864772 EADEMHTLLQLECEK Unmodified 1844.8284 0.82844951 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7;B3KWP6;B7Z6P3;G3V5P0 KTN1 Kinectin yes no 0 0 0 3 0.816 1 1 1 58.374 58.389 3 1.3032E-09 17665 20230619_1883_Aki_TMTPro18x_K_F4 145.49 134.55 35992 29846 34854 36544 27619 32025 31824 32507 40741 43137 36717 40192 48471 36309 40464 46350 50264 49360 33275 27380 35398 36303 29404 32743 32137 33468 40880 42935 38396 40789 48695 38148 41858 46564 47991 46853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175670000 5397 380 5115 10182;10183;10184 8210 8210 1 9606 Homo sapiens -0.060171581472332036 EADGILKPLPK Unmodified 1179.6863 0.68632401 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 1 7.5 0.5 1 1 50.338 50.417 3 0.0023026 13671 20230619_1888_Aki_TMTPro18x_K_F8 84.053 50.168 1242500 997450 1174400 1221500 973920 1127800 1161700 1167800 1349200 1512200 1758900 1974400 1632400 1415200 1822900 1692700 1597500 1825200 1148300 915130 1195900 1214200 1033300 1148600 1167100 1199900 1380300 1523100 1781800 1963400 1678700 1492500 1837200 1704500 1532300 1731400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 736250000 5398 1637 5116 10185;10186 8211;8212 8212 2 9606 Homo sapiens 0.10366829745703399 EADGSETPEPFAAEAK Unmodified 1647.7264 0.7264105 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 0 1.33 0.471 2 1 49.373 49.393 2;3 1.5735E-08 14169 20230619_1881_Aki_TMTPro18x_K_F2 138.73 122.33 231170 179570 210390 217540 220720 219550 239480 232910 262350 263090 283530 264090 271940 236020 267130 312760 273320 274610 213530 164750 215620 216660 228810 222260 241120 237850 266830 264280 289300 267280 277700 248360 272330 310810 261460 261220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 614990000 5399 1229 5117 10187;10188;10189 8213;8214;8215 8214 3 9606 Homo sapiens -0.0715436490297634 EADIDGDGQVNYEEFVQMMTAK Oxidation (M) 2505.0676 0.067570157 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;A8K1M2;Q96HY3;M0QZ52 CALM3;CALM2 yes no 0 1 0 2.75 1.48 1 1 1 1 63.098 63.12 3 5.5087E-24 20194 20230619_1881_Aki_TMTPro18x_K_F2 189.51 177.76 118990 78875 113780 146710 114540 124920 136080 119720 139130 158440 178090 176900 186490 143380 155470 181020 169850 203680 109860 72798 116230 142140 119460 127770 136060 123830 143170 158570 181220 177620 188470 151090 159590 182490 162610 193100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 425460000 5400 2325 5118 10190;10191;10192;10193 8216;8217;8218;8219 8217 1430;1431 4 9606 Homo sapiens -0.12476092497126956 EADIDGDGQVNYEEFVQMMTAK 2 Oxidation (M) 2521.0625 0.062484779 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;A8K1M2;Q96HY3;M0QZ52 CALM3;CALM2 yes no 0 2 0 3.4 1.02 1 2 1 1 58.269 58.301 3 1.1301E-17 18267 20230619_1882_Aki_TMTPro18x_K_F3 164.98 157.36 87546 62150 80156 107930 80274 84410 90325 93286 97934 103150 113950 117080 118820 96924 98899 128730 103320 124960 80828 57287 82202 104830 83623 87298 90762 95007 100000 104100 116370 117570 120120 102330 101340 128550 98962 118650 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 233790000 5401 2325 5118 10194;10195;10196;10197;10198 8220;8221;8222;8223;8224 8222 1430;1431 5 9606 Homo sapiens -0.13720396359804 EADIDGDGQVNYEEFVQMMTAK Unmodified 2489.0727 0.072655535 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;A8K1M2;Q96HY3;M0QZ52 CALM3;CALM2 yes no 0 0 0 3.78 1.31 2 2 2 2 1 64.763 64.791 3;4 6.1727E-39 20051 20230619_1885_Aki_TMTPro18x_K_F5 242.16 234.26 350050 229720 320660 364210 236790 325770 331850 335400 351630 426550 424990 451930 487440 426210 393430 525120 436770 533200 323050 211560 327260 356070 255700 332240 329900 344520 360350 426840 435450 456810 491090 445690 404880 526160 418150 506000 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 2960099999.9999995 5402 2325 5118 10199;10200;10201;10202;10203;10204;10205;10206;10207 8225;8226;8227;8228;8229;8230;8231;8232;8233 8232 9 9606 Homo sapiens -0.11231788634540862 EADKLEQANDDAR Unmodified 1473.6696 0.66956432 3195 M0QZQ8;Q8IUR0 TRAPPC5 Trafficking protein particle complex subunit 5 yes no 0 0 1 1.5 0.5 1 1 38.615 38.648 3 0.013086 9210 20230619_1881_Aki_TMTPro18x_K_F2 66.706 39.677 47030 32147 47584 51915 55504 57530 53960 56000 70816 67814 67847 66589 69347 52959 56591 58017 78601 71865 43447 29608 48432 50848 56980 57698 55021 57620 71085 67867 69787 67160 70103 55403 58986 58992 74945 68136 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55500000 5403 3195 5119 10208;10209 8234;8235 8235 2 9606 Homo sapiens -0.048323676688596606 EADLAAQEEAAKK Unmodified 1372.6834 0.68342347 4721 Q9Y3B7;Q53G19;Q9Y3B7-2 MRPL11 39S ribosomal protein L11, mitochondrial yes no 0 0 1 3 0 1 44.061 44.13 3 2.972E-05 11450 20230619_1882_Aki_TMTPro18x_K_F3 117.2 93.599 103010 88557 108620 120140 147520 156370 152000 145900 191970 135420 172110 149470 157810 165860 150780 138190 200070 152530 95322 81315 110550 119170 150250 155110 154150 149480 192270 138020 176740 151750 161460 168960 156070 140210 190620 144900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184580000 5404 4721 5120 10210 8236 8236 1 9606 Homo sapiens 0.011989098302365164 EADPESEADR Unmodified 1117.4524 0.4523609 2991 F8W785;O00461 GOLIM4 Golgi integral membrane protein 4 yes no 0 0 0 1 0 1 31.194 31.194 2 1.6013E-07 6461 20230619_1880_Aki_TMTPro18x_K_F1 154.85 126.45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5405 2991 5121 10211 8237 8237 1 9606 Homo sapiens -0.10166718151617715 EADPGETPSEAPSEAR Unmodified 1641.7118 0.71182307 804 Q9NQ66;A0A0D9SF51;Q9NQ66-2;A0A087WT80;A0A087WW73;A0A1B0GWB6;A0A0D9SG17;B3KXN8;H0YCJ2 PLCB1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1;Phosphoinositide phospholipase C yes no 0 0 0 1 0 1 35.575 35.575 2 0.0017214 8219 20230619_1880_Aki_TMTPro18x_K_F1 100.55 94.83 11036 7544.2 8081.8 14787 12362 14793 11898 13349 13788 13227 13077 15944 12557 14600 11170 12856 17580 16732 10172 6967.6 8562.3 14312 12508 14909 12080 13736 13914 13458 13446 16002 12802 14999 11745 13161 16752 15854 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49386000 5406 804 5122 10212 8238 8238 1 9606 Homo sapiens -0.08336437051116263 EADSVYGEWVPVEK Unmodified 1606.7515 0.75150304 3474 P18583-5;P18583-9;P18583;P18583-7;P18583-4;P18583-3;P18583-10;P18583-2;H7C1M2;A0A994J4Y9;A0A8Q3SI10;Q6ZRV7;J3QSZ5;B3KRA1;H7C2G8 SON Protein SON yes no 0 0 0 4 0 1 59.941 59.944 3 0.007481 18299 20230619_1883_Aki_TMTPro18x_K_F4 63.185 45.268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5407 3474 5123 10213 8239 8239 1 9606 Homo sapiens -0.02760265309780152 EADVMEYAVNCHVITWER Unmodified 2220.9932 0.99322342 2152 A8KAH1;P48651 PTDSS1 Phosphatidylserine synthase 1 yes no 0 0 0 5.5 0.5 1 1 59.839 59.896 3 1.68E-09 17882 20230619_1885_Aki_TMTPro18x_K_F5 104.03 99.784 40423 38495 48422 47159 40185 46093 47071 49745 48406 43082 40961 41726 48409 41048 45739 47398 45579 49966 37477 35297 48393 46918 42561 46771 47131 50389 48943 43859 42721 42411 49044 42711 46559 47669 43642 47414 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27427000 5408 2152 5124 10214;10215 8240;8241 8240 2 9606 Homo sapiens -0.06843346007417495 EAEAAEAEEPWGEEAR Unmodified 1772.7489 0.74893686 333 E7EN32;A0A024R5E3;A0A024R5D2;A0A5F9ZHS3;O00255-2;O00255;Q9UE24;A0A8C8KI72;A0A024R570;O00255-3 MEN1 Menin yes no 0 0 0 1 0 1 47.278 47.278 3 0.025618 13257 20230619_1880_Aki_TMTPro18x_K_F1 48.59 42.866 90870 81613 100540 83420 90314 119590 110670 99910 117120 67507 61204 48707 60896 45704 81790 62074 64653 48325 84150 74724 101110 84643 95283 117710 110570 102560 116570 69501 65394 50273 63125 48136 81740 61416 61912 46104 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35779000 5409 333 5125 10216 8242 8242 1 9606 Homo sapiens -0.10652765505346906 EAEAAFLNVYK Unmodified 1253.6292 0.62920306 1365 P39880-3;P39880-9;A0A2R8Y852;A0A2R8YDI1;Q13948-10;Q13948-2;Q13948-9;Q13948;P39880-6;P39880-4;P39880-5;P39880-2;P39880;A0A097ZMP4;A0A097ZMP6;B4DMN0 CUX1;CUX1-RETc;CUX1-RETa Homeobox protein cut-like 1;Protein CASP yes no 0 0 0 6 0 1 58.831 58.896 3 0.010983 17664 20230619_1886_Aki_TMTPro18x_K_F6 67.08 33.855 29850 24781 27227 27156 25995 29722 30029 28766 43926 34024 35998 32238 36314 30371 35231 38476 39230 36428 27584 22709 27859 27277 27247 29846 30465 29595 43611 34079 37293 32767 37006 31821 36082 38411 37477 34631 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14578000 5410 1365 5126 10217 8243 8243 1 9606 Homo sapiens 0.012533624693332968 EAEAAIYHLQLFEELRR Unmodified 2087.08 0.079988241 3451 V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7;Q9UKK4;Q9NYI7;Q9UN47 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM yes no 0 0 1 6.5 0.5 1 1 59.557 59.611 4 2.3566999999999998E-39 17623 20230619_1887_Aki_TMTPro18x_K_F7 266.28 238.19 152660 113650 144660 139860 108780 158310 124870 98251 216030 152360 115840 179570 177350 194940 213380 193540 148630 225690 141020 104310 147070 139300 116780 157240 127710 106120 210860 152220 126800 181350 181050 200340 212690 196400 143370 213740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 466330000 5411 3451 5127 10218;10219 8244 8244 1 9606 Homo sapiens 0.07993144600914093 EAEAAMFHR Oxidation (M) 1076.4709 0.47092828 370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;Q504U3 PKM2;PKM Pyruvate kinase;Pyruvate kinase PKM yes no 0 1 0 2.5 0.5 1 1 32.695 32.761 3 0.034322 6781 20230619_1881_Aki_TMTPro18x_K_F2 49.444 38.921 223160 188830 208690 211040 243660 245190 254470 264640 308240 264720 314110 300110 315300 254890 256750 302160 347040 296070 206280 173060 213720 211870 250520 245890 257630 268940 311030 268640 321880 301660 318960 266940 267320 302430 330820 281460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95303000 5412 370 5128 10220;10221 8245 8245 223 1 9606 Homo sapiens -0.0642483499075297 EAEAAMFHR Unmodified 1060.476 0.47601366 370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;Q504U3 PKM2;PKM Pyruvate kinase;Pyruvate kinase PKM yes no 0 0 0 3.5 0.5 1 1 38.097 38.145 3 2.6532E-05 8797 20230619_1882_Aki_TMTPro18x_K_F3 156.62 123.39 59788 108320 60536 70876 81259 91916 81558 70062 98877 91734 86201 80691 82418 77529 81468 81187 87612 80040 55709 98709 61820 75046 82806 90999 82693 73683 99259 91271 88842 82285 84251 80250 83193 81480 83715 76062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204580000 5413 370 5128 10222;10223 8246 8246 1 9606 Homo sapiens -0.05180531128121402 EAEALLQSMGLTPESPIVPPPMSPSSK Unmodified 2792.3976 0.39761849 3849 Q13409-2;Q13409-3;Q13409-6;E7EQL5;E7EV09;E7EQU2;E7ETL8;E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 0 8 0 1 65.092 65.112 4 3.5629E-09 20004 20230619_1888_Aki_TMTPro18x_K_F8 115.55 96.833 12373 10631 12639 10854 8957.5 12840 13671 10734 12428 16861 15486 18953 17431 13488 15727 18210 17100 20387 11447 9734.6 12756 10978 9738 12784 13473 11284 12873 16766 15855 18943 17637 14351 16113 18336 16371 19329 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14581000 5414 3849 5129 10224 8247 8247 1 9606 Homo sapiens 0.07311558449464428 EAEAPAGGDPAGLLPPEWEEDEER Unmodified 2563.1351 0.1350561 2420 B3KUH0;Q8WUX9;E5RJI3;E5RIU9;Q8WUX9-2;E5RFR8 CHMP7 Charged multivesicular body protein 7 yes no 0 0 0 1 0 1 61.134 61.134 3 2.29E-19 18925 20230619_1880_Aki_TMTPro18x_K_F1 146.99 144.07 6653.7 4941.6 5150.5 6543.5 7038.4 5012.4 6139.6 6384.8 6537 6618.4 7404 7516.9 7054.4 7002.1 8354.5 7909.5 8716.8 9445.7 6137.5 4538.9 5389.7 6455.9 7119.2 5223.7 6256.4 6436.5 6673.8 6701.7 7545 7574.7 7279.9 7285.5 8490.3 8020.9 8341.7 8952.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45527000 5415 2420 5130 10225 8248 8248 1 9606 Homo sapiens -0.08398602970373759 EAEDELSAR Unmodified 1018.4567 0.456718 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0;A4VCH6 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 1 0 1 36.012 36.012 2 1.0168E-11 8367 20230619_1880_Aki_TMTPro18x_K_F1 219.56 176.73 70198 39695 80735 83508 116500 126480 94264 100060 115440 80470 125120 143100 118910 107600 120440 59131 140820 134800 64865 36738 81688 81190 117570 123930 97009 103510 116630 84346 127780 141070 121680 109640 123210 64652 134500 127250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 270740000 5416 2417 5131 10226 8249 8249 1 9606 Homo sapiens -0.051772089380278885 EAEDGFRK Unmodified 950.44576 0.44575938 1156 Q6FIA3;A0A0U1RR22;Q9UNF0-2;Q9UNF0;A0A024R4X1;B0QYG7;B0QYG8;A2VCM5;F6U236;B4DFJ9;Q5TZC3;Q9BY11 PACSIN2;PACSIN1 Protein kinase C and casein kinase substrate in neurons protein 2;Protein kinase C and casein kinase substrate in neurons protein 1 yes no 0 0 1 2.5 0.5 1 1 36.472 36.529 3 0.0035052 8187 20230619_1882_Aki_TMTPro18x_K_F3 86.205 68.579 111960 60615 120960 127370 162820 162060 140470 152310 182850 125850 187000 170780 151110 141770 146510 84139 208570 172750 103370 56112 122770 123470 165110 160920 144270 155530 183750 130080 189960 170290 155280 144210 152110 90663 198710 163270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73273000 5417 1156 5132 10227;10228 8250 8250 1 9606 Homo sapiens -0.03144566521655179 EAEDGIIAYDDCGVK Unmodified 1653.7192 0.71921663 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;Q96L66;A0A8I5KTQ3;E9PLT0;E9PNG3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;Q9UG93 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 yes no 0 0 0 2 0.816 1 1 1 53.206 53.236 3 1.5068E-10 15656 20230619_1880_Aki_TMTPro18x_K_F1 151.3 131.72 157320 123590 131200 156900 117460 138630 140900 143550 158080 210810 197540 159940 214440 172470 136950 243820 186700 165960 145240 113440 135400 155450 123880 141690 141320 148100 161890 207830 201190 165310 214590 181240 143960 239200 178010 158530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 712170000 5418 88 5133 10229;10230;10231 8251;8252 8251 2 9606 Homo sapiens -0.08149420775089311 EAEDNIR Unmodified 845.38791 0.38791015 3289 O60925 PFDN1 Prefoldin subunit 1 yes yes 0 0 0 1 0 1 30.459 30.459 2 0.020718 6175 20230619_1880_Aki_TMTPro18x_K_F1 104.21 56.035 19384 9363 27049 26370 51394 44990 29229 44060 31106 17713 39640 47374 20250 29810 38758 8311 46980 35920 17937 8723.4 27182 25445 50750 44041 30862 44323 31854 20206 39501 46101 22255 30149 39362 10350 44794 33865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12079000 5419 3289 5134 10232 8253 8253 1 9606 Homo sapiens -0.04096828447086409 EAEDSLRR Unmodified 974.47812 0.47812215 3265 O43776;K7EIU7;K7EPK2;B4DF91;B4DGT6;O43776-2;K7EMQ6;K7EJ19 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 1 1.5 0.5 1 1 28.309 28.346 3 0.00073768 5384 20230619_1880_Aki_TMTPro18x_K_F1 115.49 51.287 32048 15822 45024 47431 60854 56675 49797 65176 59007 39198 62266 75475 49435 53768 60616 25675 79428 82558 29660 14761 44897 45369 61552 56752 51183 65266 59625 42104 63280 74147 51491 54705 62279 29548 75836 77799 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41026000 5420 3265 5135 10233;10234 8254 8254 1 9606 Homo sapiens -0.010137791186593859 EAEDVIWEDSASENQEGLRK Unmodified 2304.0506 0.050598185 3316 Q6UQL6;O75792 RNASEH2A Ribonuclease;Ribonuclease H2 subunit A yes no 0 0 1 1 0 1 52.192 52.192 3 0.0056549 15281 20230619_1880_Aki_TMTPro18x_K_F1 65.085 56.293 16447 20177 14742 15673 16577 20424 13953 13830 18148 20222 18310 16456 21101 18105 14832 21470 22133 21921 15243 18420 15149 16276 17033 20160 14356 14753 18281 19990 18879 16938 21158 18806 15632 21526 21105 20817 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32741000 5421 3316 5136 10235 8255 8255 1 9606 Homo sapiens -0.049265089964592335 EAEEAEREER Unmodified 1246.5426 0.5425729 4363 Q96HY6;A0A0A0MRX2;Q96HY6-2;Q6UW46 DDRGK1;UNQ2523 DDRGK domain-containing protein 1 yes no 0 0 1 1 0 1 27.022 27.022 3 0.00018983 4863 20230619_1880_Aki_TMTPro18x_K_F1 122.69 80.48 9737.3 4190.3 12315 10042 17919 16650 16510 18835 14644 8153 15560 17111 9672.3 15270 15479 4821.7 19418 16016 8996.9 3893.9 12365 9744.3 18090 16376 16676 18792 15024 9088 15687 16890 10387 15237 15793 5678.8 18517 15106 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11303000 5422 4363 5137 10236 8256 8256 1 9606 Homo sapiens -0.0708366882320206 EAEEEFWYR Unmodified 1257.5302 0.53021729 1518 A0A3B3IT57;A0A7I2V620;E9PH64;B7Z7N1;E7EWZ0;E9PF49;Q9Y6M9 NDUFB9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes no 0 0 0 1.5 0.5 1 1 52.691 52.708 2 6.6833E-05 15465 20230619_1880_Aki_TMTPro18x_K_F1 161.02 140.69 115810 112450 124310 138420 145910 176800 152100 164550 180400 138390 147500 154600 159810 141400 151340 149230 151350 156900 107280 103110 126020 138140 150140 175520 153880 168190 180760 141840 153490 155770 162360 146680 154030 150300 144840 148920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128480000 5423 1518 5138 10237;10238 8257 8257 1 9606 Homo sapiens -0.08824660495588432 EAEEPGPDSENSQENPPLR Unmodified 2093.9138 0.91377035 932 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6 MADD MAP kinase-activating death domain protein yes no 0 0 0 1 0 1 39.768 39.768 3 1.9067E-14 10020 20230619_1880_Aki_TMTPro18x_K_F1 126.07 120.55 10856 7754.2 9335.2 11089 12782 14446 13333 13804 16691 12076 15487 14415 14499 11932 13874 15382 20272 19487 10019 7129.5 9674.3 10963 13029 14332 13511 14097 16745 12377 15895 14457 14805 12580 14480 15624 19329 18468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16169000 5424 932 5139 10239 8258 8258 1 9606 Homo sapiens -0.08942998156180693 EAEETQSTLQAECDQYR Unmodified 2056.8644 0.86437732 1989 Q9P2E9;A7BI36;Q9P2E9-3;A1A5C5;A1A5C4;F8W7S5;B3KSG1;A0A087WU26 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 1 0 1 44.12 44.12 3 1.611E-09 11939 20230619_1880_Aki_TMTPro18x_K_F1 137.17 128.78 8062.4 5642.5 8994.5 7790.1 11102 10144 10345 10293 11947 11168 13110 11148 12453 10584 11834 12537 13752 15539 7455.5 5186.3 9081.6 7723.9 11327 10086 10526 10524 12124 11241 13354 11310 12702 11046 12154 12731 13151 14721 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40293000 5425 1989 5140 10240 8259 8259 1 9606 Homo sapiens -0.1217802943665447 EAEEVYR Unmodified 894.40831 0.40831125 4715 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 0 0 0 1 0 1 34.71 34.71 2 0.039915 7834 20230619_1880_Aki_TMTPro18x_K_F1 90.777 60.058 104180 47045 107860 120490 157300 172740 119580 152150 154200 109000 153240 165020 154880 138350 128850 66939 174230 152670 96095 43761 110070 116150 158510 170060 123910 155600 154940 114250 157380 163910 156850 139880 133620 73450 166120 144180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 461820000 5426 4715 5141 10241 8260 8260 1 9606 Homo sapiens -0.04311657787286549 EAEGAPQVEAGK Unmodified 1184.5673 0.56733108 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;C9J813;Q6PJM5;B4E3I0 CALD1 Caldesmon yes no 0 0 0 2 0 1 39.9 39.97 2 4.4945E-05 9798 20230619_1881_Aki_TMTPro18x_K_F2 155.99 115.26 27610 13962 28395 30607 58794 72894 39365 45948 42928 27894 50807 52129 48575 42277 45352 26270 51992 49770 25476 12939 29260 30030 58209 69811 40938 48276 43785 29938 51668 51477 49494 43102 46428 28042 49666 47031 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42817000 5427 3798 5142 10242 8261 8261 1 9606 Homo sapiens -0.017569889498190605 EAEGSSAEYKK Unmodified 1197.5513 0.55134667 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;P49321-2;Q5T626;Q5T624;Q9P1N1;O95138;H0YDS9;H0YF33;E9PRH9 NASP Nuclear autoantigenic sperm protein yes no 0 0 1 3.5 0.5 1 1 36.658 36.708 3 7.1878E-05 8196 20230619_1883_Aki_TMTPro18x_K_F4 127.56 109.15 120890 43781 190370 201250 361170 299710 212320 288360 171150 124360 286650 313550 136710 212280 259490 58673 271240 215350 111930 41457 190080 191220 356540 295170 221770 290790 180950 140100 282500 306040 150720 213810 261210 70937 259020 203090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60752000 5428 3605 5143 10243;10244 8262;8263 8263 2 9606 Homo sapiens -0.039526951867401294 EAEHHCLLHSPIPVNCPIR Unmodified 2278.1099 0.10992494 4596 Q9NUJ1-2;Q9NUJ1 ABHD10 Mycophenolic acid acyl-glucuronide esterase, mitochondrial yes no 0 0 0 7 0 1 41.248 41.319 4 2.6799E-14 9790 20230619_1887_Aki_TMTPro18x_K_F7 149 136.72 24517 20588 23305 20990 26798 30889 28645 28984 37583 24404 25762 27319 26550 22398 26809 24321 27497 28917 22665 18855 23818 21312 27635 30442 29039 29607 37269 25024 27037 27429 27089 23375 27280 24676 26312 27412 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31009000 5429 4596 5144 10245 8264 8264 1 9606 Homo sapiens 0.021994370029915444 EAEILSVLSHR Unmodified 1252.6776 0.67755023 2098 D4Q8H0;A8K710;Q9NYL2-3;Q9NYL2-2;Q9NYL2;C9J3F7 pk;ZAK Mitogen-activated protein kinase kinase kinase MLT yes no 0 0 0 6.5 0.5 1 1 55.458 55.526 3 2.1711E-09 16257 20230619_1886_Aki_TMTPro18x_K_F6 185.99 150.38 19458 16606 18715 19964 18126 22525 20269 24202 25012 21729 21214 20992 22258 18999 20817 26797 21601 27767 17992 15229 19075 19924 18960 22614 20470 24528 25055 22071 21989 21294 22619 20080 21273 26836 20703 26340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14703000 5430 2098 5145 10246;10247 8265 8265 1 9606 Homo sapiens 0.06131856109232103 EAEKPAVPETAGIK Unmodified 1438.7668 0.76675917 2571 B4DQG8;Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 yes no 0 0 1 5 0 1 45.385 45.463 3 0.0088349 11827 20230619_1885_Aki_TMTPro18x_K_F5 62.287 48.625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5431 2571 5146 10248 8266 8266 1 9606 Homo sapiens 0.06492646278070424 EAELDVNEELDK Unmodified 1402.6464 0.64636926 1628 A0A6Q8PFU3;P43034;A0A6Q8PG63;I3L495 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 0 1 0 1 52.581 52.581 3 0.034125 15360 20230619_1880_Aki_TMTPro18x_K_F1 49.298 27.741 14567 14307 15593 17463 18652 19017 19201 20607 22937 20566 20299 17144 20428 18399 20254 22380 22440 21837 13495 13117 15812 17399 19135 19153 19443 20932 23049 20688 20937 17621 20847 19147 20731 22389 21445 20749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21517000 5432 1628 5147 10249 8267 8267 1 9606 Homo sapiens -0.038848065061984016 EAELLEPLMPAIR Oxidation (M) 1496.7909 0.79086543 3646 P53618;E9PP73 COPB1 Coatomer subunit beta yes no 0 1 0 3.5 0.5 1 1 59.592 59.608 3 0.032347 18275 20230619_1882_Aki_TMTPro18x_K_F3 46.481 26.719 12900 9386.1 14266 11718 12116 14663 15603 12826 15062 14712 15445 18241 19109 15178 15066 20603 19704 18771 11931 8616.6 14334 11686 12850 14558 15512 13289 15393 14877 16007 18255 19192 16042 15677 20498 18801 17851 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21330000 5433 3646 5148 10250;10251 8268 8268 2331 1 9606 Homo sapiens 0.06234163440103657 EAELLEPLMPAIR Unmodified 1480.796 0.79595081 3646 P53618;E9PP73 COPB1 Coatomer subunit beta yes no 0 0 0 4 0 1 63.058 63.064 3 5.5349E-06 19632 20230619_1883_Aki_TMTPro18x_K_F4 123.95 107.07 21586 17893 24185 23647 20029 27619 23651 23616 32110 30919 26820 31286 35234 30753 27076 31523 39375 38168 19981 16427 24292 23458 21281 27519 23903 24597 32039 30882 28157 31701 35327 31791 28376 32025 37547 36186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32623000 5434 3646 5148 10252 8269 8269 1 9606 Homo sapiens 0.07478467302712488 EAELTEINRR Unmodified 1229.6364 0.6364137 3786 Q01970-2;Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes no 0 0 1 3 0 1 37.375 37.428 3 0.00010973 8535 20230619_1882_Aki_TMTPro18x_K_F3 130.94 70.507 43788 37766 46229 43533 61356 68967 59011 59845 68666 56320 68269 67273 59787 51558 59005 67511 67914 62201 40522 34620 46977 43833 62482 67595 59928 61645 69339 57461 69685 67295 61265 54521 60552 67268 64854 59156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47956000 5435 3786 5149 10253 8270 8270 1 9606 Homo sapiens 0.03078095069736264 EAEMEEHREHIK Oxidation (M) 1552.694 0.69400493 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C044;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 1 1 1.5 0.5 2 2 29.057 29.093 4;5 0.00018203 5334 20230619_1881_Aki_TMTPro18x_K_F2 102.66 83.799 54360 41862 46651 49474 61403 60957 54585 56111 67377 48499 63986 65074 72225 53137 55456 58564 71690 63876 50188 38400 48258 49493 62415 60678 55829 57455 67719 49961 66156 64923 72611 55526 57592 59059 68382 60642 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 139910000 5436 1676;2901 5150 10254;10255;10256;10257 8271;8272 8272 1091 2 9606 Homo sapiens -0.06023430786967765 EAEMEEHREHIK Unmodified 1536.6991 0.69909031 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C044;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 1 2 0 1 32.371 32.431 4 1.2977E-06 6670 20230619_1881_Aki_TMTPro18x_K_F2 150.16 122.3 32657 32231 27279 30628 31775 34869 34008 30918 40224 43731 38353 40788 40021 31592 34679 44816 44157 35843 30195 29483 28247 31136 32728 34874 34340 32206 40588 43415 39523 41210 40534 33589 35934 44294 42100 34170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58634000 5437 1676;2901 5150 10258 8273 8273 1 9606 Homo sapiens -0.04779126924358934 EAENPEGEEK Unmodified 1130.4728 0.472762 2314 B2RDE8;A0A384NPW1;P51858;A8K8G0;B7Z958;B7Z525;P51858-2;P51858-3 HDGF Hepatoma-derived growth factor yes no 0 0 0 1 0 1 35.468 35.468 2 8.7444E-07 8165 20230619_1880_Aki_TMTPro18x_K_F1 181.53 136.16 49027 20923 66021 71485 125790 123830 76999 105340 81823 54489 95444 114830 69850 80989 92514 25844 109700 98053 45329 19604 66558 68588 124460 120720 80698 107440 83522 59635 96338 112540 73331 81706 94237 31135 104710 92409 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41129000 5438 2314 5151 10259 8274 8274 1 9606 Homo sapiens -0.08725547491803809 EAEQLCHR Unmodified 1041.4662 0.46617725 4263 Q8TB45-2;Q8TB45 DEPTOR DEP domain-containing mTOR-interacting protein yes no 0 0 0 2 0 1 28.496 28.571 3 0.00022352 5203 20230619_1881_Aki_TMTPro18x_K_F2 156.01 135.38 14243 17473 20217 20259 28759 30478 23430 24956 28055 18451 30058 30535 22113 21561 24568 18161 30280 29206 13257 16001 20168 20363 29032 29920 24082 25698 28349 19378 30403 30141 22960 22351 25217 18946 28909 27627 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11657000 5439 4263 5152 10260 8275 8275 1 9606 Homo sapiens -0.05289719133520521 EAEQMGNELER Oxidation (M) 1320.5616 0.56159378 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 1 0 1 0 1 33.397 33.397 3 0.00019148 7346 20230619_1880_Aki_TMTPro18x_K_F1 107.03 90 18516 12514 20500 22380 27180 25360 22250 26007 28037 22956 26122 26428 24001 22141 23604 21513 29720 29726 17118 11542 20764 21815 27538 25428 22910 26431 28147 23473 26800 26520 24563 22952 24334 22096 28377 28147 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56633000 5440 349;3906 5153 10261 8276 8276 209 1 9606 Homo sapiens -0.08586455523800396 EAEQMGNELER Unmodified 1304.5667 0.56667916 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 1 0 1 41.048 41.048 2 1.0060999999999999E-22 10523 20230619_1880_Aki_TMTPro18x_K_F1 244.16 190.39 121860 94321 95605 109100 135040 145680 133410 124980 162280 137500 159960 156340 156710 134940 136970 161870 169160 155880 112440 86502 99985 109440 137180 144090 135430 129450 163510 138940 164030 157190 159150 141290 141540 161830 161450 148170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236830000 5441 349;3906 5153 10262 8277 8277 1 9606 Homo sapiens -0.07342151661168828 EAEREGATEEAVR Unmodified 1445.6746 0.6746497 4447 Q9BV20;Q9BV20-2 MRI1 Methylthioribose-1-phosphate isomerase yes no 0 0 1 1 0 1 29.353 29.353 3 6.349E-08 5737 20230619_1880_Aki_TMTPro18x_K_F1 158.31 123.62 65188 46850 74733 67823 89783 87778 75777 82682 88373 76028 100860 92077 92276 84056 88610 52787 119490 99442 60305 43081 75286 67030 91591 87132 77659 84612 89758 77706 102460 92438 94332 85364 91655 56289 113890 94029 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93242000 5442 4447 5154 10263 8278 8278 1 9606 Homo sapiens -0.030360638062575163 EAESASENEEIDISK Unmodified 1649.7268 0.72680443 1333 B3KY15;B3KXG5;A0A286YEZ9;A0A2C9F2R7;O94915-2;O94915 FRYL Protein furry homolog-like yes no 0 0 0 1 0 1 47.157 47.157 3 8.2449E-06 13181 20230619_1880_Aki_TMTPro18x_K_F1 115.82 103.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5443 1333 5155 10264 8279 8279 1 9606 Homo sapiens -0.07206989973792588 EAESCDCLQGFQLTHSLGGGTGSGMGTLLLSK Unmodified 3310.5268 0.52681154 3970 Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00 TUBB8 Tubulin beta-8 chain yes no 0 0 0 7.5 0.5 1 1 82.725 82.739 4 0.043775 25084 20230619_1888_Aki_TMTPro18x_K_F8 42.973 0 0 2531 1635.5 2344.6 2374.8 1896.5 2154.3 1434.2 2646.9 1400.8 2022.5 1204.7 1612.3 1858.9 2241.2 2809.2 2885.5 1868.2 0 2307.6 1511.6 2377.2 2392.3 1945.6 2197.4 1399.2 2638.6 1335.6 2082.2 1222.3 1693.5 1942.6 2306.3 2753.4 2747.5 1788.1 0 2 1 2 2 2 2 1 2 1 2 1 2 2 2 2 2 2 3328400 5444 3970 5156 10265;10266 8280 8280 1 9606 Homo sapiens -0.03603079720687674 EAESLIAK Unmodified 859.4651 0.46509784 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 4 0.816 1 1 1 47.587 47.652 2 0.002215 13069 20230619_1882_Aki_TMTPro18x_K_F3 130.27 27.558 393110 271190 336940 359710 419850 460210 422330 409840 579240 457220 503380 514150 528440 417220 424260 485450 582280 542680 362710 249170 348340 357220 430000 456530 430350 423420 577830 461580 521030 516020 533560 437390 442270 489770 555320 514980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1126800000 5445 3756 5157 10267;10268;10269 8281 8281 1 9606 Homo sapiens 0.029743897692469545 EAESSPFVER Unmodified 1149.5302 0.5302173 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;B4DU71;B4DHT9 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 2 0.816 1 1 1 40.744 40.788 2 8.8274E-14 10132 20230619_1881_Aki_TMTPro18x_K_F2 232.83 200.61 486760 367680 377540 445620 541950 558800 549700 541820 765250 564190 602960 633770 609060 519370 577580 717140 683670 672430 449040 337380 395510 445060 550460 556180 560050 555220 760310 571540 626710 636570 620160 549840 594510 714550 653030 639190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2637500000 5446 3452 5158 10270;10271;10272 8282;8283 8283 2 9606 Homo sapiens -0.03856660495557662 EAEVVLCGGTESMSQAPYCVR Unmodified 2342.0341 0.034101959 2292 B2RB23;P42765;A0A0B4J2A4;B3KNP8;K7EME0;K7EJB1;K7EJ68 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes no 0 0 0 4.5 0.5 1 1 55.955 55.992 3 3.0996000000000002E-30 16258 20230619_1885_Aki_TMTPro18x_K_F5 209.45 194.36 18155 18982 19922 17866 22200 24321 22150 22060 21903 26007 23944 23372 27185 23122 22374 30011 27587 28741 16830 17359 20113 18238 22866 24066 22336 22788 22441 25988 24607 23848 27418 24226 23167 29952 26353 27307 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 314270000 5447 2292 5159 10273;10274 8284 8284 1 9606 Homo sapiens -0.08323372750055569 EAEYEESVAK Unmodified 1153.5139 0.51389853 4064 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 WDR3 WD repeat-containing protein 3 yes no 0 0 0 1 0 1 42.809 42.809 3 0.0028327 11360 20230619_1880_Aki_TMTPro18x_K_F1 78.655 62.692 29183 19707 33270 35123 45989 42348 41045 36862 44348 33888 42310 50395 41255 38263 43211 32883 59471 51630 26987 18176 33651 34268 46549 42146 41761 37981 44879 34927 43527 49955 42275 39588 44737 34216 56690 48869 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31890000 5448 4064 5160 10275 8285 8285 1 9606 Homo sapiens -0.05671786452330707 EAEYFELPELVR Unmodified 1493.7402 0.74021007 1186 B3KY04;A0A140VJM4;Q96CX2 KCTD12 BTB/POZ domain-containing protein KCTD12 yes no 0 0 0 2.5 1.12 1 1 1 1 62.682 62.693 2 1.3914E-12 19529 20230619_1882_Aki_TMTPro18x_K_F3 198.62 168.96 114880 96203 111540 114370 127610 178030 175600 193320 237210 232550 270760 286060 255180 245720 243960 275060 278490 327060 106220 88224 113950 114880 132950 175420 176140 197320 239390 234540 275620 286580 260610 256260 250370 278750 266460 309920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 380480000 5449 1186 5161 10276;10277;10278;10279 8286 8286 1 9606 Homo sapiens 0.013089573867773652 EAFCQLLQLMK Unmodified 1379.6941 0.69412828 3241 O15357;O15357-2 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 0 0 0 4 0 1 65.094 65.103 3 0.0083583 20446 20230619_1883_Aki_TMTPro18x_K_F4 75.819 44.223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5450 3241 5162 10280 8287 8287 1 9606 Homo sapiens 0.019468976792950343 EAFDEVDMAHR Unmodified 1318.5612 0.56119985 4618 Q9NX46;B4DHV5 ADPRHL2 Poly(ADP-ribose) glycohydrolase ARH3 yes no 0 0 0 1 0 1 42.973 42.973 3 2.3002E-05 11400 20230619_1880_Aki_TMTPro18x_K_F1 130.16 115.6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5451 4618 5163 10281 8288 8288 1 9606 Homo sapiens -0.08533830452984148 EAFEISK Unmodified 822.41233 0.41233399 145 A0A024R1K7;Q04917;B2R6N6;Q9H4N8;A2IDB2 YWHAH 14-3-3 protein eta yes no 0 0 0 5 0 1 49.41 49.487 3 0.036747 13477 20230619_1885_Aki_TMTPro18x_K_F5 63.486 11.699 27968 22528 25310 25727 26131 26471 25745 24134 48360 31683 34126 29899 35364 23831 26183 32886 33548 28238 25838 20655 25940 25736 27102 26674 26664 25026 47362 31605 35684 30242 35586 25284 27228 32623 31991 26889 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13627000 5452 145 5164 10282 8289 8289 1 9606 Homo sapiens -0.005975682935741133 EAFGFIER Unmodified 967.47633 0.47633123 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;E9PLT0;E9PNG3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;A0A8I5KPQ8;A0A8I5KS07;A0A8I5KW29;A0A8I5KYL4;A0A8I5KNL1 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 0 4.5 0.5 1 1 53.164 53.21 2 0.0066198 15446 20230619_1883_Aki_TMTPro18x_K_F4 110.03 82.896 344280 286640 301040 344240 312330 362910 325970 352740 613390 499360 380920 286280 420750 291180 317810 467430 394630 360760 318050 262890 309830 343150 324750 365350 336590 364750 599310 490740 402600 300740 423000 309900 330040 460440 376600 343900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 294070000 5453 88 5165 10283;10284 8290 8290 1 9606 Homo sapiens -0.008707881366376569 EAFGQAHTNHK Unmodified 1238.5792 0.57923317 4271 Q8TD16;Q8TD16-2 BICD2 Protein bicaudal D homolog 2 yes no 0 0 0 6 0 1 30.333 30.364 4 2.9216E-06 5925 20230619_1886_Aki_TMTPro18x_K_F6 154.36 126.69 24627 15318 26519 28473 33336 35157 32470 30333 45135 33669 43200 39842 41477 35229 30044 22133 51176 39958 22752 14142 26896 27733 34067 34915 33168 31418 45136 34070 44292 39984 41861 35827 31865 23483 48683 37805 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33446000 5454 4271 5166 10285 8291 8291 1 9606 Homo sapiens -0.03051327415982996 EAFISEEEIAK Unmodified 1264.6187 0.61869795 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 2 0.816 1 1 1 54.379 54.403 3 0.00088822 16126 20230619_1882_Aki_TMTPro18x_K_F3 91.937 69.02 50808 44938 53458 51591 53295 59641 54738 57993 69570 50790 52681 52759 58375 44271 52337 61173 59171 58607 47025 41190 54068 51683 55431 59665 55578 59156 69314 51808 55093 53215 59089 46861 53751 61030 56545 55694 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131710000 5455 4372 5167 10286;10287;10288 8292 8292 1 9606 Homo sapiens -0.003026649757657651 EAFLQEVWK Unmodified 1148.5866 0.58660996 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;P26640-2 VARS Valine--tRNA ligase yes no 0 0 0 7 0 1 62.225 62.261 2 0.0022935 18815 20230619_1887_Aki_TMTPro18x_K_F7 100.48 58.497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5456 725 5168 10289 8293 8293 1 9606 Homo sapiens 0.018260121317553057 EAFQLFDR Unmodified 1024.4978 0.49779495 2989 F8W1R7;P60660-2;P60660;G3V1V0;B7Z6Z4;J3KND3;G8JLA2;G3V1Y7 MYL6 Myosin light polypeptide 6 yes no 0 0 0 5 0.816 1 1 1 56.589 56.636 2 0.0013866 16494 20230619_1885_Aki_TMTPro18x_K_F5 143.45 96.102 364510 322890 299570 345980 396310 435240 367710 415640 772310 470410 421570 366680 423830 346910 389860 439470 394980 421350 336730 295770 311440 348760 404250 433010 384550 427110 749070 470130 448550 376420 430950 363560 397610 438990 378050 400300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 869790000 5457 2989 5169 10290;10291;10292 8294;8295 8294 2 9606 Homo sapiens -0.013474031079113047 EAFSDGITSVK Unmodified 1152.5663 0.56626845 3409 P08243-2;P08243;P08243-3;B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 5 0 1 51.507 51.582 2 4.9471E-12 14416 20230619_1885_Aki_TMTPro18x_K_F5 206.48 134 93447 69608 68926 72569 72309 76988 70205 57780 95819 108400 111030 140790 115950 97736 125410 116090 112440 139840 86171 63788 72111 73123 74878 77140 71697 61780 96850 107820 113650 139830 118600 103220 126600 117720 107900 132470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31935000 5458 3409 5170 10293 8296 8296 1 9606 Homo sapiens -0.003912033187361885 EAFSLFDK Unmodified 955.4651 0.46509784 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;Q9BRL5;A8K1M2;M0QZ52;G3V479;F8WBR5;P27482 CALM3;CALM2;CALM1;CALML3 Calmodulin-like protein 3 yes no 0 0 0 6.75 0.829 2 1 1 60.065 60.115 2 0.0016679 18422 20230619_1886_Aki_TMTPro18x_K_F6 149.65 64.442 5052600 4197300 4222100 4794500 3773200 4932800 4599300 4832400 7425000 6047900 5311000 6063300 6857100 7104500 3477100 9391400 4175700 7387700 4666100 3847900 4355500 4795500 3990800 4974600 4675700 4975800 7318500 6054000 5615500 6194400 6798500 7406000 3668600 9270600 4010800 7026400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 8039399999.999999 5459 2325 5171 10294;10295;10296;10297 8297;8298;8299;8300 8298 4 9606 Homo sapiens -0.01441610230756396 EAFSLFDKDGDGTITTK Unmodified 1843.884 0.88397377 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;Q9BRL5;A8K1M2;M0QZ52;G3V479;F8WBR5 CALM3;CALM2;CALM1 yes no 0 0 1 6.5 0.957 1 2 2 1 58.91 58.965 3;4 9.5035E-10 17383 20230619_1888_Aki_TMTPro18x_K_F8 141.97 132.23 856520 858040 1094200 996480 1032200 791580 1067700 1027800 546910 849080 998150 320810 328880 196560 1373000 115180 127640 56543 794930 786220 1089800 993140 1073100 822620 1059600 1029000 605110 850130 971080 346700 404110 203390 1302200 117990 133670 54587 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6099099999.999999 5460 2325 5172 10298;10299;10300;10301;10302;10303 8301;8302;8303 8303 3 9606 Homo sapiens -0.004212853636545333 EAFVHVVTLEDMR Unmodified 1544.7657 0.76571331 4096 Q69YJ7;Q9NTZ6;B3KQH4 DKFZp667H197;RBM12 RNA-binding protein 12 yes no 0 0 0 4.5 0.5 1 1 55.143 55.183 3 8.9594E-08 15936 20230619_1885_Aki_TMTPro18x_K_F5 119.17 103.41 25897 20358 27142 26267 21584 29435 27671 25609 35830 35055 28696 28581 30879 27155 28146 35710 32028 34287 23950 18689 27386 26083 23075 29422 27797 26681 35770 34737 29872 29256 31331 28513 28926 35644 30622 32573 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80021000 5461 4096 5173 10304;10305 8304 8304 1 9606 Homo sapiens 0.015121086375302184 EAGAGGLAIAVEGPSK Unmodified 1425.7464 0.74635808 3484 P21333;P21333-2;Q60FE5;Q60FE6;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91;H0Y5C6 FLNA;FLJ00119 Filamin-A yes no 0 0 0 4.67 0.471 1 2 52.861 52.916 2;3 1.3304E-07 15012 20230619_1885_Aki_TMTPro18x_K_F5 158.58 136.49 232570 179000 207910 242020 271940 296080 268880 264850 293980 308540 308280 338920 310830 258770 306290 347100 312000 336640 214790 164430 214430 239830 277340 294540 272030 273880 298810 310350 315990 339890 316890 274220 312090 346680 298630 319760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 778060000 5462 3484 5174 10306;10307;10308 8305;8306 8305 2 9606 Homo sapiens 0.05051475618256518 EAGDVCYADVQK Unmodified 1353.5871 0.58708025 3844 Q13242;H0YIB4 SRSF9 Serine/arginine-rich splicing factor 9 yes no 0 0 0 2.33 0.471 2 1 45.78 45.859 2 3.4292E-09 12253 20230619_1882_Aki_TMTPro18x_K_F3 199.09 164.56 44921 40442 40843 44942 48207 48793 43292 45499 58803 59781 64509 64786 61724 49807 47979 71875 77639 72133 41532 37055 41953 45076 49363 49002 44431 47087 59269 59799 65770 65050 62446 53048 50797 71807 73960 68530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91896000 5463 3844 5175 10309;10310;10311 8307;8308 8308 2 9606 Homo sapiens -0.07556981001403074 EAGDVCYADVYR Unmodified 1416.598 0.59797928 3140 J3KTL2;Q07955;Q59FA2;Q07955-3;Q07955-2;A8K1L8;J3KSR8;A0A2I7N9Y9;B7Z570 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 1.75 0.829 2 1 1 46.397 46.449 2 2.9182E-17 12501 20230619_1882_Aki_TMTPro18x_K_F3 219.5 167.77 905130 707600 711750 891090 815280 927670 918710 895400 1082600 1087200 1075700 1026800 1172100 971870 956160 1214800 1089000 1194300 835240 649460 741830 885060 842310 934510 925200 922190 1093600 1086800 1107700 1043600 1182800 1017400 984900 1214900 1041400 1134200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2330500000 5464 3140 5176 10312;10313;10314;10315 8309;8310;8311 8311 3 9606 Homo sapiens -0.09365578627102877 EAGEGGEAEAPAAEGGK Unmodified 1528.6641 0.66414459 3524 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 1 0 1 37.875 37.875 3 1.3316E-23 9141 20230619_1880_Aki_TMTPro18x_K_F1 169.37 154.21 62648 27897 66275 76805 76039 125280 70862 85041 94963 86524 120000 195260 136540 169120 106740 99754 211930 276550 57792 25992 67282 74020 78438 121850 72557 89694 96332 90728 123140 192050 137890 171620 114830 111250 202210 260560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 251990000 5465 3524 5177 10316 8312;8313 8313 2 9606 Homo sapiens -0.07904091251361933 EAGELKPEEEITVGPVQK Unmodified 1952.0102 0.01023692 3646 P53618 COPB1 Coatomer subunit beta yes yes 0 0 1 4.67 0.471 1 2 51.891 51.95 3;4 2.3384E-05 14602 20230619_1885_Aki_TMTPro18x_K_F5 95.666 74.415 222390 200980 233530 246810 228770 265160 258370 253840 286210 299600 288440 273470 310090 250010 294340 327880 302520 308910 205860 184320 236330 245730 238860 266470 259700 261330 290240 299530 296720 278120 314940 262860 300220 327080 289420 293590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 360860000 5466 3646 5178 10317;10318;10319 8314;8315 8315 2 9606 Homo sapiens 0.07231221141614697 EAGENWQENPETYEDSFYK Unmodified 2334.9553 0.95530082 1875 A0A994J595;P54289-4;P54289-5;P54289;Q9UIU0;P54289-3;P54289-2;A0A994J5M8;H0Y715;Q9UDQ3 CACNA2D1;WUGSC:H_DJ0560O14.1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 2 0 1 58.342 58.355 3 3.8262E-21 17938 20230619_1881_Aki_TMTPro18x_K_F2 193.9 186.79 26387 21922 28074 26459 15212 15300 24564 27278 23985 30339 31985 34512 33999 29555 34860 38277 35705 40007 24415 20107 28171 26228 17044 16603 24242 27127 24804 30593 32556 34684 34678 31109 35501 38410 34184 37964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28056000 5467 1875 5179 10320 8316 8316 1 9606 Homo sapiens -0.1587786218756264 EAGEQGDIEPR Unmodified 1199.5418 0.54184461 3846 Q13283;Q5U0Q1;Q6FI03;Q32P45;A0A7I2YQN9;A0A7I2V5M7;A0A7P0P2U7;B7Z8K4;Q6ZP53;A0A7I2V2X7;A0A7I2V548;A0A7I2V496 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 1 0 1 34.441 34.441 2 1.1316E-12 7745 20230619_1880_Aki_TMTPro18x_K_F1 215.84 180.02 475070 265440 462910 525630 625880 662500 562070 589440 703740 581470 699390 652300 725080 559990 539770 398280 787800 690630 438320 245440 474050 510650 635520 657430 574810 606880 708380 590510 718280 655480 730170 572900 564920 419730 750690 653230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 913010000 5468 3846 5180 10321 8317 8317 1 9606 Homo sapiens -0.04994463472235111 EAGFGGGPNATITTSLK Unmodified 1619.8155 0.81550028 3397 P07199 CENPB Major centromere autoantigen B yes yes 0 0 0 8 0 1 53.756 53.827 3 2.8156E-06 15204 20230619_1888_Aki_TMTPro18x_K_F8 105.39 96.46 47259 46632 55297 57441 53136 75016 65429 66447 83875 65704 78938 79065 75563 64631 68901 84189 80609 87064 43817 42756 55515 57347 55825 74276 65826 68445 84114 66888 81066 79211 76927 68171 70915 84400 77057 82639 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131200000 5469 3397 5181 10322 8318 8318 1 9606 Homo sapiens 0.030385148471850698 EAGGGGVGGPGAK Unmodified 1012.4938 0.49377221 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 0 4 0 1 35.836 35.884 2 1.589E-07 7882 20230619_1883_Aki_TMTPro18x_K_F4 158.79 122.39 29299 13771 41930 39961 57868 63622 45424 62596 47575 34933 58314 62157 43317 47906 50355 19533 64827 62368 27116 12841 41770 38468 58473 62442 46650 63215 48699 37607 58707 61331 45101 48384 51701 22588 61869 58792 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33360000 5470 4246 5182 10323 8319 8319 1 9606 Homo sapiens -0.011974926016137033 EAGITEK Unmodified 746.38103 0.38103386 3674 V9HWK1;P60174;P60174-3;B4DUI5;Q53HE2;P60174-4;Q2QD09;U3KPZ0;U3KQF3 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 2.5 0.5 1 1 38.621 38.681 2 0.007829 9194 20230619_1881_Aki_TMTPro18x_K_F2 122.13 55.093 80879 29910 123020 125390 195900 192680 125200 182610 131130 64854 170860 198180 91420 129060 156050 45455 180840 144050 74854 28227 122530 119450 195520 189290 130740 183960 134450 75906 170240 192650 99252 130770 158270 52943 172530 135910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136950000 5471 3674 5183 10324;10325 8320 8320 1 9606 Homo sapiens -0.0023014132766547846 EAGKEPAEGGGGDGSHR Unmodified 1609.7081 0.70807509 2013 Q9HCJ6;A8K288 VAT1L Synaptic vesicle membrane protein VAT-1 homolog-like yes no 0 0 1 1 0 1 27.693 27.693 4 6.6679E-09 5101 20230619_1880_Aki_TMTPro18x_K_F1 131.18 119.21 5279.8 3259 10143 8745.1 9175.6 7367.9 12447 19433 17961 6676.9 10135 11234 8458.8 8323.2 11552 4236.2 11846 8057.6 4911.8 3029 9876 8370.3 9667.2 7821 12541 18652 17623 7570 10706 11096 8845.2 8462 11666 4563.5 11306 7626.5 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3829500 5472 2013 5184 10326 8321;8322 8322 2 9606 Homo sapiens -0.07239062034341259 EAGLAPVPMIIFAK Unmodified 1455.816 0.81595797 1273 H0Y5R6;A0A494C0S8;A0A1B0GVN9;A0A494C0Q8;P06132;A0A494C085 UROD Uroporphyrinogen decarboxylase yes no 0 0 0 3 0 1 64.295 64.327 3 4.6055E-05 20274 20230619_1882_Aki_TMTPro18x_K_F3 101.53 98.211 33885 26850 27960 32278 26082 32541 32026 34727 36380 31603 38187 36709 35507 32935 34754 38213 39319 40649 31281 24631 28898 32158 27448 32927 32094 35241 36856 32265 38969 36929 36310 34365 35626 38443 37585 38577 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65456000 5473 1273 5185 10327 8323 8323 1 9606 Homo sapiens 0.1062826303334532 EAGLSWK Unmodified 789.4021 0.40210366 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C0V6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 6.5 0.5 1 1 49.462 49.543 2 0.019115 13363 20230619_1887_Aki_TMTPro18x_K_F7 111.82 22.142 650270 595110 658380 624760 664990 759640 733650 730590 861800 860220 848180 708740 896470 623900 739190 774650 810900 685140 601800 544970 668080 630710 692350 757460 739800 751570 870400 857840 871860 723780 904950 655020 758520 771010 774300 652150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 358800000 5474 1676;2901 5186 10328;10329 8324;8325 8325 2 9606 Homo sapiens -0.0010213122815230236 EAGLVAQHPPAR Unmodified 1244.6626 0.66256887 4416 Q9BRJ6;C9JQV0;A0A024R836;H7C0T1;H7C2R9 C7orf50;MGC11257 Uncharacterized protein C7orf50 yes no 0 0 0 4.5 0.5 1 1 33.608 33.678 3 9.0657E-08 7009 20230619_1883_Aki_TMTPro18x_K_F4 148.76 125.98 55456 40169 55252 52857 69844 75845 59065 74406 75762 70779 76730 82794 78307 75472 74129 69904 94412 85722 51240 36896 56342 52645 71123 74902 60743 75942 76287 72094 78789 83222 79753 77776 76540 71249 90077 81284 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157070000 5475 4416 5187 10330;10331 8326;8327 8326 2 9606 Homo sapiens 0.05002409031862953 EAGMQPQLQIR Oxidation (M) 1285.6449 0.6448699 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2;A0A024R3G0 HYOU1 Hypoxia up-regulated protein 1 yes no 0 1 0 5 0 1 40.892 40.98 2 0.0017269 9927 20230619_1885_Aki_TMTPro18x_K_F5 110.88 72.076 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5476 874 5188 10332 8328 8328 506 1 9606 Homo sapiens 0.013473257147097684 EAGMQPQLQIR Unmodified 1269.65 0.64995528 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2;A0A024R3G0 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 6 0 1 45.453 45.539 2 8.0565E-06 11898 20230619_1886_Aki_TMTPro18x_K_F6 151.83 58.564 120310 95541 96309 117130 120080 139700 133930 132740 169060 132100 132470 142990 142660 122250 150880 155290 159760 154160 111040 87661 100340 116780 123390 139370 135250 136070 168690 133950 138200 143980 145710 128530 153790 155450 152730 146460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130310000 5477 874 5188 10333 8329 8329 1 9606 Homo sapiens 0.025916295773413367 EAGNINQSLLTLGR Unmodified 1484.7947 0.79470526 1656 A0A7I2V3A9;B2RAM6;P52732;A0A7I2V3V3;A0A7I2YQY4 KIF11 Kinesin-like protein;Kinesin-like protein KIF11 yes no 0 0 0 8 0 1 54.967 55.033 2 6.218E-16 15739 20230619_1888_Aki_TMTPro18x_K_F8 226.53 183.29 65249 53456 58636 63181 36220 63247 54527 55415 65523 83585 73028 57548 73869 54702 56671 80818 60928 66183 60284 49024 59828 63011 40105 63727 54298 57899 66509 82153 74478 59550 74484 57946 58304 79900 58291 62997 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159490000 5478 1656 5189 10334 8330 8330 1 9606 Homo sapiens 0.07169969258188758 EAGPSVAVDSSGR Unmodified 1230.584 0.58404378 1846 A0A8V8TPU9;A0A8V8TQD7;B8QGS9;Q99959-2;Q99959 PKP2 Plakophilin-2 yes no 0 0 0 2 0 1 36.683 36.741 2 0.0074608 8381 20230619_1881_Aki_TMTPro18x_K_F2 79.201 55.645 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5479 1846 5190 10335 8331 8331 1 9606 Homo sapiens -0.022024880638582545 EAGSQKDENLALYVENQFR Unmodified 2210.0604 0.060375011 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TND0;A0A8V8TLK4 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 1 4.5 1.12 1 1 1 1 59.761 59.798 3 3.3997E-07 18264 20230619_1883_Aki_TMTPro18x_K_F4 108.34 99.631 129970 117440 135500 125000 100990 108880 114930 108050 100740 119340 118120 93260 96105 76420 106030 95645 82812 79178 120300 107570 136580 125510 107920 111390 114750 110800 104200 119150 119280 95329 99168 80426 106310 94935 79434 75391 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342520000 5480 1817 5191 10336;10337;10338;10339 8332;8333 8332 2 9606 Homo sapiens 0.003747237995867181 EAGVEMGDEDDLSTPNEK Oxidation (M) 1950.8 0.80004573 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 1 0 1 0 1 45.116 45.116 3 7.2549E-19 12296 20230619_1880_Aki_TMTPro18x_K_F1 179.9 166.49 122450 104110 96527 105340 127620 113160 128130 123050 140660 151330 150660 148990 169410 137270 141550 189550 159640 168460 113060 95332 100700 106460 129960 114200 129520 125770 143100 151330 154900 151040 170950 144760 145700 188310 152630 160200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 248570000 5481 1207 5192 10340 8334;8335 8334 740 2 9606 Homo sapiens -0.13732229313495736 EAGVEMGDEDDLSTPNEK Unmodified 1934.8051 0.80513111 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 1.33 0.471 2 1 49.47 49.499 3 6.7987E-10 14225 20230619_1881_Aki_TMTPro18x_K_F2 138.91 128.25 40428 35382 40383 41227 36716 50547 53043 50415 53331 48745 59792 49455 65819 52079 53257 66475 62645 64667 37398 32436 41001 41290 38928 50377 52540 51465 54533 49390 61229 50352 66362 54415 54969 66426 59862 61432 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 339040000 5482 1207 5192 10341;10342;10343 8336;8337 8337 2 9606 Homo sapiens -0.12487925450864168 EAGVFVPR Unmodified 873.47085 0.47085192 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 6 0.816 1 1 1 44.089 44.174 2 0.0099608 11252 20230619_1885_Aki_TMTPro18x_K_F5 100.19 79.906 710890 613910 670240 625800 513830 614110 611260 580520 712640 848980 832680 797810 890740 679780 751790 934060 891180 815420 657260 562150 681580 631390 549310 621440 614220 602710 725730 841860 850850 808380 900170 718780 775590 927390 850810 776030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2428300000 5483 161 5193 10344;10345;10346 8338;8339 8338 2 9606 Homo sapiens 0.029055330715777927 EAHAQSIGMNR Unmodified 1212.567 0.56695393 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 5.67 1.7 1 1 1 29.839 29.892 3 7.5847E-13 5502 20230619_1883_Aki_TMTPro18x_K_F4 178.53 163.56 72420 38190 73705 73697 89969 93531 76536 83290 96702 86304 104170 98441 101980 87941 81917 73731 113540 97389 66826 35309 74993 71707 91789 92789 78612 85850 97642 87459 106360 99003 103220 90337 85338 75690 108220 92309 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 114990000 5484 1104 5194 10347;10348;10349 8340;8341;8342 8340 3 9606 Homo sapiens -0.03082687150640595 EAHAQSIGMNR Oxidation (M) 1228.5619 0.56186855 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3 DNA helicase;DNA replication licensing factor MCM3 yes no 0 1 0 5.67 1.7 1 1 1 23.191 23.234 3 0.00092558 3782 20230619_1883_Aki_TMTPro18x_K_F4 97.779 86.949 2950.4 2264.1 3889.9 4291.8 5480.5 4810.3 3794.9 5802.3 6415.9 3381.6 3887.8 4621.1 3433.1 4446.6 6082 3698.6 3981.5 5455.7 2734.3 2089 3897.4 4171.9 5514.6 4846.3 4008.5 5788.4 6278.5 3589.3 4097.6 4628.1 3653.9 4548 6009.4 3835.1 3840 5157.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6994100 5485 1104 5194 10350;10351;10352 8343;8344;8345 8343 679 3 9606 Homo sapiens -0.043269910132721634 EAHEPLAVADAK Unmodified 1249.6303 0.63026569 4712 Q9Y2X3;B3KN82;B4DUY3 NOP58 Nucleolar protein 58 yes no 0 0 0 3 0.816 1 1 1 40.486 40.551 3 2.8418E-05 10043 20230619_1881_Aki_TMTPro18x_K_F2 120.57 104.71 431770 168470 350840 449670 513000 493820 473960 456790 593820 525550 597310 585720 544520 505800 494220 619890 615080 610410 397320 157010 366090 430850 518790 494800 483670 471160 598090 529480 610190 589360 555440 530160 510820 620210 587300 579890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 807390000 5486 4712 5195 10353;10354;10355 8346;8347;8348 8346 3 9606 Homo sapiens 0.01543576838230365 EAHLPPGAMAAVGLSWEECK Unmodified 2152.0081 0.0081452054 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 6 0.816 1 1 1 58.982 59.038 3;4 5.2335E-17 17773 20230619_1886_Aki_TMTPro18x_K_F6 167.97 161.86 208130 152110 222630 217610 182630 204790 223870 208770 227340 262060 245020 228020 262320 221970 233060 270100 242780 248820 192440 139840 224320 214200 193910 208110 223530 214490 232310 260900 251210 232870 265760 231730 238250 269370 232240 236540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 297740000 5487 3606 5196 10356;10357;10358 8349;8350 8349 2 9606 Homo sapiens -0.02177854139426927 EAIDSYIK Unmodified 937.47566 0.47566253 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 4.5 0.5 1 1 50.98 51.033 2 0.00059112 14482 20230619_1883_Aki_TMTPro18x_K_F4 160.54 114.17 420290 345780 348860 449350 434370 448280 429670 433720 840660 553070 511660 460080 474320 410430 448830 548660 542350 495750 388090 317400 362170 445080 445090 453140 445750 447280 819180 550520 538250 469730 484410 432310 462560 545880 517690 471600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 488320000 5488 826 5197 10359;10360 8351 8351 1 9606 Homo sapiens 0.00442372423674442 EAIEGTYIDK Unmodified 1137.5554 0.55536941 3713 P62280;M0QZC5 RPS11 40S ribosomal protein S11 yes no 0 0 0 2.75 0.829 2 1 1 49.577 49.634 2;3 7.5132E-07 13907 20230619_1882_Aki_TMTPro18x_K_F3 205.09 149.42 730690 521390 558880 658330 700990 793620 703230 692810 1089200 830720 655740 666540 953620 748590 491330 1063400 696500 882150 673800 478740 584780 655150 718310 789870 720280 718270 1070500 828170 705580 687400 941790 786360 522340 1051600 665710 839120 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1325400000 5489 3713 5198 10361;10362;10363;10364 8352;8353;8354 8353 3 9606 Homo sapiens -0.007906056930096383 EAIESAIGGNAYQHSK Unmodified 1673.8009 0.80091285 3740 P63172 DYNLT1 Dynein light chain Tctex-type 1 yes yes 0 0 0 6 0 1 46.08 46.166 3 1.473E-42 12187 20230619_1886_Aki_TMTPro18x_K_F6 272.24 230.27 227100 196130 214650 231370 217640 242420 246220 233600 295000 283650 322960 309640 349070 295230 280630 332820 345300 345330 209970 179830 219240 230940 226700 244140 248120 240660 298840 284860 331010 312780 352200 307030 290420 334410 329750 327860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 312660000 5490 3740 5199 10365 8355 8355 1 9606 Homo sapiens -0.009035573009441578 EAIIPGSVYDR Unmodified 1218.6245 0.62445203 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A8A5YP40;B3KY55;Q6ZUC8 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 4.5 0.5 1 1 49.656 49.712 2 1.0355E-06 13805 20230619_1883_Aki_TMTPro18x_K_F4 167.69 112.31 109490 99027 99949 102830 110760 133330 118730 124050 165240 152680 151260 136620 150940 137820 138150 159830 160690 167700 101240 90678 102520 103990 114600 132310 120680 128060 165130 152350 155710 139520 153550 143290 142080 160640 153580 159170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158320000 5491 462 5200 10366;10367 8356 8356 1 9606 Homo sapiens 0.02388478326565746 EAILDIITSR Unmodified 1129.6343 0.63428844 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;Q6ZP35;E7EMC6;E5RJF5;E5RK63;A0A0S2Z301;E5RI05;E5RFF0;E5RIU8;E5RJR0;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 0 7.5 0.5 1 1 62.4 62.43 2 8.1571E-07 18898 20230619_1887_Aki_TMTPro18x_K_F7 182.39 140.1 579520 559420 565250 658730 710010 843580 629400 673180 877780 715250 837230 762140 680150 696230 879690 820340 811420 939340 536360 512730 578160 659300 724860 835010 647040 700480 877890 722600 853820 769850 709410 726580 887000 829200 777910 890460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2287900000 5492 1062;1064 5201 10368;10369 8357 8357 1 9606 Homo sapiens 0.07465666331927423 EAINQETVQQR Unmodified 1314.6528 0.65279205 275;1599 A0A024R3Z1;Q6NYC5;E7EV03;A0A669KB77;P11137-3;P11137 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 0 2.5 0.5 1 1 35.46 35.517 2 1.5409E-16 7878 20230619_1881_Aki_TMTPro18x_K_F2 221.91 195.31 41391 27841 40716 43547 37547 42609 50343 50853 73067 59118 65082 65449 64117 57370 54682 43156 75066 73161 38225 25633 41395 42667 39641 43324 50706 51600 72766 59523 67091 65821 65059 58732 56824 45318 71612 69178 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48971000 5493 275;1599 5202 10370;10371 8358;8359 8358 2 9606 Homo sapiens 0.008051762358491033 EAINVEQAFQTIAR Unmodified 1588.8209 0.82092001 1257 A0A158RFU6;P51149;A0A6Q8PG52;A0A6Q8PH84;C9J8S3;A0A6Q8PGE6;C9J4V0;C9J4S4 RAB7A Ras-related protein Rab-7a yes no 0 0 0 6.5 0.5 2 2 61.978 62.023 2;3 2.5095E-37 18689 20230619_1887_Aki_TMTPro18x_K_F7 221.63 201.88 734840 581430 628870 704020 564190 649120 686740 705940 765010 811980 834910 815510 881900 751100 807030 943760 796740 920510 678530 533420 647140 700310 594950 661900 688010 720170 777960 814880 855280 825850 894920 787090 822220 943600 763270 874100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4319000000 5494 1257 5203 10372;10373;10374;10375 8360;8361;8362 8362 3 9606 Homo sapiens 0.05006238429655241 EAIQHPADEK Unmodified 1136.5462 0.54620171 572 Q9NUQ9;A0A024R9G4;A0A8V8TMP7;Q68D08;E5RI16;E5RJL8;E5RIR8;E5RJE1;E5RGI7 FAM49B;DKFZp686B04128 Protein FAM49B yes no 0 0 0 2.5 0.5 1 1 33.989 34.05 3 8.5712E-06 7273 20230619_1881_Aki_TMTPro18x_K_F2 138.45 106.44 141640 75219 197520 233980 272750 271620 172100 220210 200690 143640 232500 272260 181120 188560 238990 88435 244230 242860 131110 70206 197250 223300 274320 270350 180500 226480 203880 153220 235170 267390 189440 191950 241430 99642 233620 229030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281990000 5495 572 5204 10376;10377 8363;8364 8363 2 9606 Homo sapiens -0.01660954258682068 EAIREHQMAK Unmodified 1211.6081 0.60809046 1319 P23193;A0A384MTX4;A0A1W2PPZ5;B7Z4W0;P23193-2;A0A1W2PRL9;B7Z4S1 TCEA1 Transcription elongation factor A protein 1 yes no 0 0 1 5.5 0.5 1 1 32.286 32.344 4 0.054387 6656 20230619_1886_Aki_TMTPro18x_K_F6 60.641 42.582 32826 29947 36009 30750 50850 41275 42110 43486 56602 37650 43994 30068 36155 31734 39919 35484 53709 34816 30400 27419 36487 31161 51306 41041 43404 44089 56277 38174 45296 30985 37359 32883 41253 35579 51124 33145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13647000 5496 1319 5205 10378;10379 8365 8365 1 9606 Homo sapiens 0.010750738888191336 EAISLVCEAVPGAK Unmodified 1442.7439 0.74391524 2520 B4DL02;P29353-3;P29353-2;P29353-7;P29353;P29353-6;Q5T181;Q5T182 SHC1 SHC-transforming protein 1 yes no 0 0 0 7 0 1 58.926 58.976 3 0.009398 17422 20230619_1887_Aki_TMTPro18x_K_F7 66.215 45.345 50856 42013 49388 51667 50560 53955 49967 51537 56474 56066 58628 52493 58194 43124 66736 55820 51051 56905 47017 38544 50316 51419 52404 54341 50641 52938 57263 56306 60016 53155 59746 45503 66788 55986 49037 54016 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21374000 5497 2520 5206 10380 8366 8366 1 9606 Homo sapiens 0.04025303888943199 EAITHLLGVALTR Unmodified 1392.8089 0.80889876 2356 B4E0B7;B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00;A0PJ76 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 5 0 1 60.994 61.044 3 2.0672E-06 18340 20230619_1885_Aki_TMTPro18x_K_F5 137.8 101.85 20757 21134 23352 23529 19607 22976 24638 22992 30574 22486 26413 28741 28039 27312 26465 30196 28964 30440 19243 19356 23453 23569 20808 23280 24733 23489 30611 22963 27384 28851 28518 28351 27099 30304 27699 28904 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72970000 5498 2356 5207 10381 8367 8367 1 9606 Homo sapiens 0.1282066647713691 EAKEEEGKEEEGGEEEEAEGGEEETK Unmodified 2866.1636 0.16357485 3438 P12036-2;P12036 NEFH Neurofilament heavy polypeptide yes no 0 0 2 1 0 1 40.165 40.165 4 1.9458E-09 10174 20230619_1880_Aki_TMTPro18x_K_F1 119.33 109.61 19953 16285 15560 15496 4708.2 7631.8 6096.5 8826.4 11309 35492 38161 62470 50443 48687 21882 73421 69380 59473 18416 14907 16001 15629 5832.3 8358.8 6277.8 9665.3 12393 35211 38544 61689 49823 51903 25656 72442 65854 56672 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51617000 5499 3438 5208 10382 8368 8368 1 9606 Homo sapiens -0.19486039433013502 EAKPDELMDSK Unmodified 1261.586 0.58601761 2148 A8KA83;Q9P0L0;Q9P0L0-2 VAPA Vesicle-associated membrane protein-associated protein A yes no 0 0 1 3 0 1 45.396 45.472 3 0.00019298 12052 20230619_1882_Aki_TMTPro18x_K_F3 116.19 22.84 371530 325620 365450 420560 372030 448360 476160 479840 610130 535350 601580 629600 630230 521920 537710 676460 679040 676370 343650 298820 372310 417240 389180 451850 478110 489510 613280 541030 618950 631380 637970 550090 556970 676870 648320 642430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 380250000 5500 2148 5209 10383 8369 8369 1 9606 Homo sapiens -0.03431195370262685 EALAEAALESPRPALVR Unmodified 1791.9843 0.98429694 2231 B2R6A3;O14745;O14745-2;J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF;Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 0 0 1 6 0 1 53.358 53.435 3 5.1768E-14 15374 20230619_1886_Aki_TMTPro18x_K_F6 166.48 126.41 155200 128670 147350 148070 132310 153470 181440 188910 196350 188830 162800 147480 207840 158930 160970 230760 193170 195780 143460 117960 150150 148110 139990 155590 180560 190450 197920 189580 170460 152180 208390 167440 166680 228550 184530 186310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 314350000 5501 2231 5210 10384 8370 8370 1 9606 Homo sapiens 0.11998416480651031 EALCGCTVNVPTLDGR Unmodified 1760.8186 0.81855352 3503 Q6FI51;Q6FHS4;P25685;A0A7I2V3K7;P25685-2;M0R080 DNAJB1 DnaJ homolog subfamily B member 1 yes no 0 0 0 6 0 1 53.329 53.406 2 2.2904E-14 15381 20230619_1886_Aki_TMTPro18x_K_F6 237.07 24.972 20510 17855 21159 21737 19291 24307 22890 20371 26325 27204 24888 23903 26776 19075 25121 28950 26547 33178 18977 16375 21420 21666 20307 24290 22976 21273 26580 27029 25681 24256 27165 20388 25676 29152 25432 31444 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98943000 5502 3503 5211 10385 8371 8371 1 9606 Homo sapiens -0.03142301361958744 EALDDVTLPR Unmodified 1127.5823 0.58225287 1507 P14735;A0A7I2V610;A0A3B3ISG5;A0A7I2V2P6;A0A7I2V3E3;A0A7I2YQV5;Q59GA5;P14735-2;B3KSB8;B7Z7W6;A0A7I2V3K9;A0A7I2V4Q3;A0A7I2V2S1 IDE Insulin-degrading enzyme yes no 0 0 0 2 0 1 50.93 50.975 2 4.0469E-07 14876 20230619_1881_Aki_TMTPro18x_K_F2 150.27 68.971 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5503 1507 5212 10386 8372 8372 1 9606 Homo sapiens 0.023565029181781938 EALDVLGAVLK Unmodified 1126.6598 0.6597749 623 Q92552-2;D6RH20;A0A024RAJ1;A0A8Q3WKZ8;A0A8Q3SHR4;A0A8Q3WL16;B4DT94;G5EA06;A0A8Q3WKF1;Q92552;Q6PKB3;B4DKI9;Q8N6F2 MRPS27 28S ribosomal protein S27, mitochondrial yes no 0 0 0 8 0 1 64.071 64.091 3 0.0010169 19588 20230619_1888_Aki_TMTPro18x_K_F8 90.685 44.079 43163 39090 40550 42947 43798 53242 51269 48767 57660 46146 48087 43443 48464 48436 50223 53554 43682 49096 39919 35812 41486 43201 45483 52951 51441 50058 57961 46735 49787 44435 49578 50033 50701 53484 41895 46659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24874000 5504 623 5213 10387 8373 8373 1 9606 Homo sapiens 0.10151140854372898 EALEAYRR Unmodified 1006.5196 0.51959303 488 A0A024R829;Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 yes no 0 0 1 5 0.816 1 1 1 34.884 34.947 3 0.00033386 7525 20230619_1885_Aki_TMTPro18x_K_F5 152.63 106.2 120410 101660 110810 113110 162210 153490 127730 129030 212490 129020 135260 104440 124260 91706 122500 132530 129730 96793 111290 93170 114110 113840 163490 151680 133320 133460 208360 129860 141690 106860 127030 97206 125040 130510 123830 92434 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76408000 5505 488 5214 10388;10389;10390 8374;8375 8374 2 9606 Homo sapiens 0.016594016406543233 EALEEFYGR Unmodified 1112.5138 0.51383895 4502 Q9H2P9-3;Q9H2P9-2;Q9H2P9-6;Q9H2P9-4;Q9H2P9;Q9H2P9-5 DPH5 Diphthine synthase yes no 0 0 0 2.5 0.5 1 1 52.193 52.245 2 0.01565 15153 20230619_1882_Aki_TMTPro18x_K_F3 74.92 60.402 295470 244240 284200 284150 301440 339780 331970 322920 415200 322880 312460 310990 350320 293360 322950 348460 365800 299490 273140 223940 289920 284500 312760 339000 335420 331030 413980 326190 327080 315720 355110 306060 331350 346520 349120 285220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112630000 5506 4502 5215 10391;10392 8376 8376 1 9606 Homo sapiens -0.03791741661666492 EALEHLCTYEK Unmodified 1391.6391 0.63911582 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;Q9BXJ9-4;A0A8V8TQT7 NAA15;NARG1 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 5 0.816 1 1 1 47.145 47.212 3 2.5681E-06 12572 20230619_1885_Aki_TMTPro18x_K_F5 149.49 126.61 384990 304580 363310 355610 345010 412910 361720 352990 466030 466490 483980 465380 496210 400400 408170 522060 497680 492070 355750 279330 370550 355760 360750 411820 367090 367800 469670 465430 495990 470410 501770 421660 422170 520650 475270 467710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 302000000 5507 2297 5216 10393;10394;10395 8377;8378 8378 2 9606 Homo sapiens -0.04103817587611047 EALELTDTGLLSGSEER Unmodified 1818.8847 0.88470206 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2 0 1 59.5 59.512 2 2.6187000000000003E-84 18454 20230619_1881_Aki_TMTPro18x_K_F2 342.43 296.55 31792 25622 30835 31333 24880 28936 31505 38058 31592 35740 37948 42314 42070 34386 42317 44207 40491 47339 29387 23506 31318 31160 26499 29647 31420 38172 32450 36412 38858 42392 42802 36258 42938 44435 38807 44905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22369000 5508 3881 5217 10396 8379 8379 1 9606 Homo sapiens 0.008015092854066097 EALENCITLQDFNR Unmodified 1721.8043 0.80428367 4409 Q9BPX3;Q6NUR1;H0Y9Z8 NCAPG Condensin complex subunit 3 yes no 0 0 0 4 0 1 57.484 57.487 2 3.1355E-05 17274 20230619_1883_Aki_TMTPro18x_K_F4 134.49 119.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5509 4409 5218 10397 8380 8380 1 9606 Homo sapiens -0.02774630518615595 EALEPSGENVIQNK Unmodified 1526.7577 0.75765105 2318 B2RDK6;O75477 ERLIN1 Erlin-1 yes no 0 0 0 3.5 0.5 1 1 48.571 48.629 3 1.2378E-11 13503 20230619_1882_Aki_TMTPro18x_K_F3 132.79 116.57 96608 79366 82349 95324 98574 115710 120870 103080 132050 91837 118120 102100 134190 102630 116270 120050 118500 127910 89224 72796 85196 95207 101780 115150 120830 105930 133160 93841 122440 103340 135510 106830 118690 120790 113420 121370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 559150000 5510 2318 5219 10398;10399 8381 8381 1 9606 Homo sapiens 0.015342529217832634 EALEQGPR Unmodified 898.45084 0.45084476 175 B3KVB0;K7ESN3;A0A024R1Y7;Q8N2G8-2;Q8N2G8-3;Q8N2G8 GHDC;LGP1 GH3 domain-containing protein yes no 0 0 0 2 0 1 34.337 34.394 2 0.0065893 7424 20230619_1881_Aki_TMTPro18x_K_F2 110.12 67.089 18097 10293 19533 19584 26098 27531 24996 27910 33956 21766 32145 32327 27959 25514 32112 15127 35496 36483 16713 9510.6 19823 19106 26559 27227 25543 28309 33953 22666 32890 32087 28879 26015 32670 16619 33936 34422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11568000 5511 175 5220 10400 8382 8382 1 9606 Homo sapiens -0.002442626590436703 EALEVDWSSEK Unmodified 1291.5932 0.59321148 107 A0A024R0R4;Q9UBE0;M0QZS6;B3KNJ4;Q9UBE0-2;Q9UBE0-3;M0QX65;B4DY66 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes no 0 0 0 2.5 0.5 1 1 55.359 55.4 3 0.0011851 16534 20230619_1882_Aki_TMTPro18x_K_F3 73.632 58.092 37191 25405 32762 38836 35055 33282 37005 34257 49476 34323 42815 35990 37140 36959 40637 43699 41915 35578 34320 23382 33712 38024 36272 34101 37574 34958 49363 34776 43952 36544 38294 38408 41348 43350 40048 33902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76972000 5512 107 5221 10401;10402 8383;8384 8384 2 9606 Homo sapiens -0.04092139498220604 EALFNEFVAAAR Unmodified 1336.6776 0.67755023 1699 A0A7P0T8N8;O14776-2;O14776;G3V220 TCERG1 Transcription elongation regulator 1 yes no 0 0 0 7.5 0.5 1 1 62.821 62.852 2 1.7915E-05 19086 20230619_1887_Aki_TMTPro18x_K_F7 140.78 111.82 95857 90314 111090 105950 120060 134840 125330 107110 113110 117510 129400 87006 90029 71296 165170 77272 67737 80906 88837 82779 111700 106100 124050 133540 125680 111650 116560 117280 130140 89249 96533 74445 160790 78053 65844 76759 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196440000 5513 1699 5222 10403;10404 8385 8385 1 9606 Homo sapiens 0.022678561092561722 EALGDAQQSVR Unmodified 1172.5786 0.57856447 1609 Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2;K7EIH8;K7ER44;K7EK03;K7EPP7;K7ESP1;K7ELJ8;K7EJV7;K7EN19;K7EJL5;K7EJE9;A0A6I8PR93 DNAJC7 DnaJ homolog subfamily C member 7 yes no 0 0 0 2 0.816 1 1 1 37.259 37.297 2 3.0828E-17 8522 20230619_1882_Aki_TMTPro18x_K_F3 238.73 197.08 62060 40235 50115 61491 68134 78945 63183 60458 110220 66519 77071 66722 75752 66268 55748 68058 77432 70485 57220 37039 52246 60520 69371 78043 65387 63210 108150 67048 80454 67748 76450 68466 58301 68472 73828 66946 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271230000 5514 1609 5223 10405;10406;10407 8386 8386 1 9606 Homo sapiens -0.000821668556682198 EALGGQALYPHVLVK Unmodified 1593.8879 0.88787736 95 Q9BUJ2;A0A0A0MRA5;Q9BUJ2-2;Q9BUJ2-4;A8K6U7;A8K3W4;B7Z4B8;A0A024R0J9;Q9BUJ2-3;A8K5K0;M0QYZ0;M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 1.5 0.5 1 1 53.996 54.01 3 6.2355E-14 16201 20230619_1881_Aki_TMTPro18x_K_F2 173.36 131.35 332570 277680 298720 332320 304520 355320 346770 331530 403360 394590 379010 401530 410850 337580 373260 467880 416930 454700 307300 254670 306580 331420 317270 357010 348910 342100 406860 395650 391560 405180 416500 357270 383170 467040 398750 431880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 219080000 5515 95 5224 10408;10409 8387;8388;8389 8389 3 9606 Homo sapiens 0.11468893711366945 EALGHQVIR Unmodified 1021.5669 0.56687757 1751 A0A8I5KQS8;A0A8I5KX97;A0A8I5KS21;A0A8I5KWC6;A0A8I5KP51;Q5T160 RARS2 Probable arginine--tRNA ligase, mitochondrial yes no 0 0 0 6 0 1 34.487 34.533 3 0.00073837 7446 20230619_1886_Aki_TMTPro18x_K_F6 104.01 79.119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5516 1751 5225 10410 8390 8390 1 9606 Homo sapiens 0.05695680911662748 EALGIPAAASFK Unmodified 1173.6394 0.63937381 3534;2560 B4DP06;V9HWH7;P31939;B2R7P8;P31939-2 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 0 3.67 3.09 1 1 1 57.829 57.851 3 2.1704E-05 17580 20230619_1880_Aki_TMTPro18x_K_F1 122.33 87.438 186060 155580 169790 194320 178040 229380 205710 212960 262000 243730 250650 229050 242010 212300 236780 266740 252100 267590 171950 142750 174160 193490 185400 228810 207550 219460 263220 244290 257180 232750 247080 222420 241890 267130 241170 254090 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 533120000 5517 2560;3534 5226 10411;10412;10413 8391;8392;8393 8391 3 9606 Homo sapiens 0.059499701945469496 EALIAASETLK Unmodified 1144.634 0.63395408 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;B3KVJ5 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 6 0 1 57.47 57.541 3 3.3998E-06 17080 20230619_1886_Aki_TMTPro18x_K_F6 145.55 134.72 55829 45739 50182 47367 50267 53137 50264 53652 69077 65967 67539 55374 66408 46169 58955 75878 55442 55152 51580 41896 51421 47818 52237 53339 51283 55079 69247 65691 69220 56455 67378 49523 59985 74561 53078 52604 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66817000 5518 4593 5227 10414 8394 8394 1 9606 Homo sapiens 0.0674224661208882 EALICPTCNVTIHNR Unmodified 1796.8662 0.86617242 1584 A0A8Q3SIN5;D3DVA5;V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;B4DJ49;B7Z977;V9GYF5;V9GYG5;V9GZ14 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 0 0 0 8 0 1 44.054 44.073 3 3.8994999999999995E-19 11135 20230619_1888_Aki_TMTPro18x_K_F8 177.84 167.36 62080 52178 66840 68693 82615 80814 78464 68743 73346 69061 85923 85635 72585 63949 94805 83321 96316 123180 57450 47899 67740 68160 84326 80545 79195 71114 75486 70282 87037 85477 75577 67756 96043 85659 92326 116470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55221000 5519 1584 5228 10415 8395;8396 8396 2 9606 Homo sapiens -0.00038602371114393463 EALLSSAVDHGSDEVK Unmodified 1655.8002 0.80024414 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 3 0 1 49.619 49.695 3 0.00020424 13975 20230619_1882_Aki_TMTPro18x_K_F3 94.339 80.939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5520 3756 5229 10416 8397 8397 1 9606 Homo sapiens -0.001423967407163218 EALNSCNKR Unmodified 1090.5189 0.5189411 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 1 7.5 0.5 1 1 31.515 31.566 3 0.0027987 6174 20230619_1888_Aki_TMTPro18x_K_F8 87.789 71.157 68938 39166 137250 93403 216680 146410 149560 180340 87917 72259 123670 87182 67382 63228 195740 22569 60197 32106 64147 36330 134560 90602 215880 144900 152960 178810 94425 79140 122780 87119 76509 63830 188330 24471 58712 30496 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206890000 5521 1658 5230 10417;10418 8398 8398 1 9606 Homo sapiens -0.022697610706927662 EALNVINTHTK Unmodified 1238.6619 0.66190017 3327 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;O76094-2;Q71V07;R4GNC1;D6RDY6 HEL103;SRP72 Signal recognition particle subunit SRP72 yes no 0 0 0 7.5 0.5 1 1 43.931 43.981 3 1.0997E-09 11074 20230619_1888_Aki_TMTPro18x_K_F8 190.1 123.42 281450 222320 276190 296030 314580 372700 325920 321910 408110 406580 416990 430600 468660 392470 373670 480060 524190 486890 260150 204160 281740 293810 324350 369780 330490 334590 411600 407200 429660 434780 472290 410770 390510 481070 499830 462520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 411660000 5522 3327 5231 10419;10420 8399;8400 8400 2 9606 Homo sapiens 0.05211569592165688 EALPDGVNISK Unmodified 1141.5979 0.59790293 488 A0A024R829;Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 yes no 0 0 0 4.5 0.5 2 2 51.343 51.394 2;3 0.00099646 14649 20230619_1883_Aki_TMTPro18x_K_F4 120.06 91.104 159310 146630 146250 145690 512810 189540 316970 178150 233020 164020 184340 169930 182680 251420 180460 193430 184290 171600 147320 134210 154740 147890 495150 189220 327740 182780 240350 167010 191380 175120 187070 253120 183830 194160 176200 163260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 369890000 5523 488 5232 10421;10422;10423;10424 8401;8402 8401 2 9606 Homo sapiens 0.03276789435244609 EALPGSGQAR Unmodified 984.49886 0.49885759 2556 B4DNR3;B4DQI4;F8W9U3;V9HW87;Q96IU4 ABHD14B;HEL-S-299 Alpha/beta hydrolase domain-containing protein 14B yes no 0 0 0 3.5 0.5 1 1 34.241 34.296 2 0.0017753 7240 20230619_1883_Aki_TMTPro18x_K_F4 102.01 58.797 29615 16326 29453 29808 46928 43543 40865 49989 55078 33826 50503 53090 43608 39688 47604 26390 53974 52976 27327 15078 30192 29164 47156 43122 41997 50149 55028 35655 51751 52539 44938 40695 48566 28294 51574 50038 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54453000 5524 2556 5233 10425;10426 8403 8403 1 9606 Homo sapiens 0.0059881126099980975 EALQDVEDENQ Unmodified 1288.5419 0.54190419 3709 V9HW98;P62258;P62258-2;B7ZA86;I3L0W5 HEL2;YWHAE 14-3-3 protein epsilon yes no 0 0 0 1 0 1 48.298 48.298 2 2.2469E-06 13622 20230619_1880_Aki_TMTPro18x_K_F1 164.96 158.27 145730 121620 140530 132290 146010 174190 152140 149030 168680 182790 206500 192550 221240 169760 193900 212350 221160 197990 134730 111440 143240 133330 151520 172390 153620 154870 172480 183220 210620 194360 223900 178170 199250 211860 211180 188290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3598199999.9999995 5525 3709 5234 10427 8404 8404 1 9606 Homo sapiens -0.0908250826287258 EALQLMATYLPK Unmodified 1376.7374 0.7373733 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 3.5 0.5 1 1 63.822 63.841 3 0.018789 20063 20230619_1882_Aki_TMTPro18x_K_F3 60.628 42.897 130580 96389 101790 126530 105700 131360 123960 117980 155390 144810 137280 142820 127550 141380 127540 175320 160250 155920 120450 88527 106020 125310 110210 132110 124860 122210 155790 144920 141320 145060 130780 147500 131770 174420 152980 148310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199000000 5526 832 5235 10428;10429 8405 8405 1 9606 Homo sapiens 0.06407410728252216 EALQNINDQSDR Unmodified 1401.6484 0.64843495 1284 A0A1C7CYX9;Q59GB4;A9CQZ4 DPYSL2 yes no 0 0 0 2 0.816 1 1 1 39.852 39.887 2 2.2762E-17 9767 20230619_1881_Aki_TMTPro18x_K_F2 224.66 182.47 112450 89631 94691 113850 75546 73110 87992 81853 116220 118310 115570 121400 137570 94781 94508 144360 140180 122350 103830 82267 97462 112450 80334 77281 88902 84095 116820 117700 119550 122210 137560 101330 99648 142890 133560 116510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147150000 5527 1284 5236 10430;10431;10432 8406;8407 8406 2 9606 Homo sapiens -0.036323329777360414 EALQPLINR Unmodified 1052.5978 0.59784335 4383 Q96N67;Q96N67-6;Q96N67-2;Q96N67-5;Q96N67-3;Q96N67-4;A0A2X0SSK2;B3KRG0;A0A1B0GWE0;B4DSH0;A4FU72 DOCK7 Dedicator of cytokinesis protein 7 yes no 0 0 0 8 0 1 47.806 47.865 2 0.011505 12626 20230619_1888_Aki_TMTPro18x_K_F8 82.426 54.319 64174 51459 57619 65384 68580 69373 68536 73088 82053 70475 76935 76267 80345 69778 71165 83133 81152 83831 59282 47230 59281 64937 70349 69945 69531 74329 82596 71557 79315 76975 81476 72890 73145 83333 77568 79606 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13786000 5528 4383 5237 10433 8408 8408 1 9606 Homo sapiens 0.07364834225904815 EALQQQHSVQVDQLR Unmodified 1777.9071 0.90710925 818 D3DWY0;C9J2V2;A0A087X0G7;A0A087WUW6;A0A087X1B1;A0A8I5KQX1;Q9Y6K9;Q9Y6K9-2;C9JN51 IKBKG NF-kappa-B essential modulator yes no 0 0 0 4.5 0.5 1 1 40.131 40.197 3 3.5156E-42 9618 20230619_1885_Aki_TMTPro18x_K_F5 241.8 212.99 61674 45666 65023 69240 77125 75068 75917 74886 91757 72110 83587 76340 85036 69362 78619 68076 79137 80192 57020 42010 65972 68038 79048 75460 77098 76449 92192 73195 86157 77086 86410 71746 80026 69153 75720 76034 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77140000 5529 818 5238 10434;10435 8409;8410 8410 2 9606 Homo sapiens 0.04927198264363142 EALREDCAAQAQR Unmodified 1516.7052 0.70523832 4417 Q9BRY6;Q9BRK4;B4DP66 LZTS2 Leucine zipper putative tumor suppressor 2 yes no 0 0 1 2 0 1 31.524 31.587 3 0.00014755 6335 20230619_1881_Aki_TMTPro18x_K_F2 99.498 81.581 10685 7292.1 9352.4 9439.6 11872 14442 11325 11105 15283 10796 12704 15177 11695 11692 9533 11322 17759 13545 9859.7 6698.7 9651.5 9418.9 12139 14142 11569 11567 15227 11072 13124 15079 11889 12147 10193 11505 16883 12857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8784100 5530 4417 5239 10436 8411 8411 1 9606 Homo sapiens -0.03244608692853035 EALTYDGALLGDR Unmodified 1392.6885 0.68850885 3913;3914 Q15056;A0A7I2V4E4;Q75MU1;B4DMV6;Q75MU2;Q15056-2;A0A7I2V385;A4D198 EIF4H;WBSCR1;LOC392647 Eukaryotic translation initiation factor 4H no no 0 0 0 3 0.816 2 2 2 54.893 54.924 2;3 2.4953999999999997E-59 16148 20230619_1883_Aki_TMTPro18x_K_F4 291.24 248.96 452490 388430 402910 444020 388320 471760 435500 434780 562400 580850 515170 507660 581240 495200 493080 635570 528230 576000 418160 356050 413480 444270 406450 474130 440320 450610 564250 577090 533550 518320 586970 518650 505700 632680 505390 547540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1575999999.9999998 5531 3913;3914 5240 10437;10438;10439;10440;10441;10442 8412;8413;8414;8415 8415 4 9606 Homo sapiens 0.007872136928426698 EALVDTLTGILSPVQEVR Unmodified 1939.0626 0.062606842 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 7.6 0.49 2 3 65.348 65.371 2;3 3.0485999999999998E-59 20235 20230619_1887_Aki_TMTPro18x_K_F7 302.35 259.75 33423 27504 33238 34211 24425 33035 31949 28648 28859 38824 44740 43701 40327 40004 40661 44509 42718 50658 30905 25236 33659 33983 26304 33384 31708 29867 30229 38826 44963 44024 41344 41607 41480 44989 40907 48021 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 214160000 5532 4386 5241 10443;10444;10445;10446;10447 8416;8417;8418 8416 3 9606 Homo sapiens 0.1306380427527074 EAMDPIAELLSQLSGVR Oxidation (M) 1843.935 0.93496349 4640 Q9P0J7 KCMF1 E3 ubiquitin-protein ligase KCMF1 yes yes 0 1 0 7.5 0.5 1 1 67.13 67.151 3 0.00038807 20997 20230619_1887_Aki_TMTPro18x_K_F7 72.583 64.78 4652.5 3774.6 3273.5 4544.3 3336.9 4592.2 5575.4 3991.5 2724 4352.9 5257.5 5083 4873.2 2852.4 2908.2 4617.7 5839 4798.3 4291.3 3462.4 3451.5 4524.6 3523.5 4624.4 5400.7 4135.5 3040.2 4396.1 5255.5 5052.2 4885.2 3114.8 3162.6 4616.2 5551.2 4559.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9125000 5533 4640 5242 10448;10449 8419 8419 2840 1 9606 Homo sapiens 0.0467534040958526 EAMEDGEIDGNK Oxidation (M) 1322.5296 0.52962495 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;B3KTP9;A0A7I2V699;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 1 0 1.33 0.471 2 1 39.773 39.773 3 3.4282E-06 9669 20230619_1880_Aki_TMTPro18x_K_F1 141.44 120.64 319500 224530 291280 296720 372290 398620 360670 384950 512090 352390 454820 489640 498430 418410 421530 429300 547600 465660 294960 206280 299490 295050 380220 394980 368950 393230 510230 362390 471370 488430 503770 434480 436930 433330 522160 442200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2829700000 5534 1658 5243 10450;10451;10452 8420;8421;8422;8423 8421 1073 4 9606 Homo sapiens -0.11873867997610432 EAMEDGEIDGNK Unmodified 1306.5347 0.53471033 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;B3KTP9;A0A7I2V699;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 0 1.5 0.5 1 1 43.851 43.892 3 1.6169E-10 11795 20230619_1880_Aki_TMTPro18x_K_F1 191.04 185.99 548980 362240 449930 499620 554600 632470 552160 580380 861970 683550 687860 786530 887000 713320 602010 798520 936290 766720 506250 333040 467190 494840 568750 628090 566240 599100 853410 688970 722880 791020 885570 742780 636590 798800 891430 729190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3344399999.9999995 5535 1658 5243 10453;10454 8424;8425 8424 2 9606 Homo sapiens -0.10629564134978864 EAMEHPYFYPVVK Unmodified 1608.7647 0.76465068 3067 P19784;H3BNI9;H3BSA1 CSNK2A2 Casein kinase II subunit alpha' yes no 0 0 0 7 0 1 53.917 53.985 3 8.8227E-05 15311 20230619_1887_Aki_TMTPro18x_K_F7 103.88 74.553 76441 60154 63570 80631 63157 81275 83092 81286 97369 94277 90628 96900 101470 88668 95813 112990 103070 119990 70568 55246 65769 79721 66305 82095 83044 83404 98128 94675 93831 97980 102980 93027 98031 113490 98663 113830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212260000 5536 3067 5244 10455 8426 8426 1 9606 Homo sapiens -0.015381057314016289 EAMEHPYFYTVVK Oxidation (M) 1628.7545 0.75447993 1352 Q5U5J2;P68400;A0A2R8Y5A0;B2R6D7;E7EU96;Q2I0Y7;A0A2R8YD58;A0A2R8YFU2;B5BUH5;A0A2R8YF43;A0A2R8YDP2;P68400-2;Q8NEV1;A0A087WY74 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 yes no 0 1 0 6.5 0.5 1 1 49.549 49.63 3 0.0056851 13725 20230619_1886_Aki_TMTPro18x_K_F6 68.463 48.886 62070 56643 71574 70768 79693 74126 67159 75134 87228 78898 75938 82501 91029 70860 77164 101000 89543 86732 57508 51955 72005 70367 81698 74767 69105 76769 87315 79654 79139 83221 91742 75076 79524 100140 85535 82540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125230000 5537 1352 5245 10456;10457 8427 8427 856 1 9606 Homo sapiens -0.03474713456648715 EAMGIYISTLK Unmodified 1224.6424 0.64241028 3356 O95433;O95433-2;G3V438;H0YJG7;H0YJU2 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 1.5 0.5 1 1 61.16 61.166 3 0.049045 18963 20230619_1880_Aki_TMTPro18x_K_F1 45.915 24.409 15047 14234 14460 15684 15600 16173 15465 14440 18217 18105 19626 18961 18995 18490 18878 20920 21641 21542 13923 13039 14760 15729 16106 16288 15688 14976 18461 18133 20040 19200 19420 19207 19362 21013 20679 20454 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 263750000 5538 3356 5246 10458;10459 8428 8428 1 9606 Homo sapiens 0.0390747725705296 EAMNDPLLER Unmodified 1186.5652 0.56522259 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 2 0 1 48.347 48.418 2 3.3382E-05 13685 20230619_1881_Aki_TMTPro18x_K_F2 163.66 108.58 169570 172300 180640 189930 173710 200610 196730 178620 237990 223210 228880 197250 245450 207500 217790 241160 228320 223130 157120 157800 182550 190550 181690 201610 198290 185260 239740 222530 235750 201910 248650 215500 222660 240750 218320 212140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 456710000 5539 3246 5247 10460 8429 8429 1 9606 Homo sapiens -0.020597409592710392 EAMNHPGHLK Oxidation (M) 1148.5397 0.53967654 2183 B0YJ76;P00374;A0A024RAQ3;P00374-2 DYR;DHFR Dihydrofolate reductase yes no 0 1 0 5.75 0.829 2 1 1 28.378 28.45 3;4 0.0030933 5093 20230619_1885_Aki_TMTPro18x_K_F5 88.056 60.958 69664 41788 54141 62388 68513 72253 62906 66309 94795 70638 77018 67741 70400 62851 62690 57957 65848 54112 64190 38473 56545 61407 69956 72162 64724 68253 93981 71135 79481 68733 71715 64719 64026 58144 62891 51480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 54148000 5540 2183 5248 10461;10462;10463;10464 8430;8431;8432 8430 1355 3 9606 Homo sapiens -0.02865170691052299 EAMNHPGHLK Unmodified 1132.5448 0.54476192 2183 B0YJ76;P00374;A0A024RAQ3;P00374-2 DYR;DHFR Dihydrofolate reductase yes no 0 0 0 6.5 0.5 1 1 32.09 32.155 4 0.0017856 6644 20230619_1886_Aki_TMTPro18x_K_F6 81.865 38.838 18823 10865 17478 19795 18394 21892 18935 19098 26998 19207 29348 23160 23583 23381 19298 18182 23101 20056 17363 10031 17895 19265 19079 21895 19313 19711 27091 19551 29693 23359 24068 23820 19901 18472 22045 19040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59424000 5541 2183 5248 10465;10466 8433 8433 1 9606 Homo sapiens -0.016208668284207306 EAMSAYNSHEEGR Oxidation (M) 1495.5998 0.5997702 1056 A0A0S2A4E4;A0A0M4G3H8;P35573-2;P35573-3;P35573;G1UI17 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes no 0 1 0 1 0 1 27.639 27.639 3 6.2009E-07 5041 20230619_1880_Aki_TMTPro18x_K_F1 142.83 138.03 3826.4 1238.1 3136.5 2774.4 3441 3119.2 3724.1 3068.2 3693.7 2599.9 2174.6 2319.9 2061 2884.6 2433.3 2254.6 4142.8 2393.4 3519.6 1151.8 3245.1 2678.6 3553.2 3125.7 3735.3 3127.2 3702.1 2647.4 2300.4 2385.7 2136 2919.1 2560.2 2285.2 3935.1 2278.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3882800 5542 1056 5249 10467 8434 8434 614 1 9606 Homo sapiens -0.128205696091527 EAMSAYNSHEEGR Unmodified 1479.6049 0.60485558 1056 A0A0S2A4E4;A0A0M4G3H8;P35573-2;P35573-3;P35573;G1UI17 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes no 0 0 0 1.5 0.5 1 1 32.537 32.567 3 2.6711E-08 6742 20230619_1881_Aki_TMTPro18x_K_F2 163.33 156.85 6793.6 4125.5 6178.8 7745.6 6339.3 9392.6 7467.8 7459.6 10262 7422.7 8685 9532.3 7426.7 7151 10519 8115.6 10337 9350.8 6267 3809.8 6343.1 7535.9 6627.7 9315.4 7548.5 7755.4 10221 7574.4 8941.3 9497.5 7773.9 7502.2 10618 8217.2 9885.5 8872 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16224000 5543 1056 5249 10468;10469 8435 8435 1 9606 Homo sapiens -0.1157626574652113 EAMVAFFNSAVASAEEEQAR Unmodified 2155.9844 0.98443288 854 A0A087WYC0;A0A8I5KT73;A0A1W2PQY5;A0A8I5KNZ1;A0A8I5QJQ7;A0A6Q8KRG2;B7ZC06;A0A8I5KZ68;A0A8J9BZL8;Q08379;Q08379-2;Q5HYE0 GOLGA2;DKFZp686K0319 Golgin subfamily A member 2 yes no 0 0 0 5.5 0.5 1 1 64.743 64.788 3 1.2703E-17 20076 20230619_1885_Aki_TMTPro18x_K_F5 169.49 157.64 7336.1 5982.9 6342.2 8380 8366.2 10253 9670.5 9729.5 9216.3 8105 10441 8645.3 9754.9 10311 10991 10762 12145 10870 6775.7 5496.6 6571.4 8284.8 8571.7 10207 9659.1 9931.5 9455.7 8299.2 10618 8823.7 10051 10596 11216 10816 11600 10328 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35375000 5544 854 5250 10470;10471 8436 8436 1 9606 Homo sapiens -0.047319963722202374 EAMVQAEEAAAEITR Oxidation (M) 1633.7618 0.76175015 2138 A8K9K6;O00567;A0PJ92;A0A494C128;H0YDU4;H0Y653;Q9BSN3 NOP56 Nucleolar protein 56 yes no 0 1 0 1 0 1 50.488 50.488 3 8.4133E-08 14547 20230619_1880_Aki_TMTPro18x_K_F1 128.9 99.555 26626 21654 25428 27732 23507 30487 29627 26277 36461 29666 28076 30311 32081 25825 29018 30737 33064 32402 24610 19875 25923 27536 24780 30510 29716 27240 36408 29840 29392 30579 32467 27058 29793 30898 31592 30761 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14826000 5545 2138 5251 10472 8437 8437 1337 1 9606 Homo sapiens -0.02978025646871174 EAMVQAEEAAAEITR Unmodified 1617.7668 0.76683553 2138 A8K9K6;O00567;A0PJ92;A0A494C128;H0YDU4;H0Y653;Q9BSN3 NOP56 Nucleolar protein 56 yes no 0 0 0 3.67 1.7 1 1 1 59.894 59.928 3 6.4165E-15 18578 20230619_1881_Aki_TMTPro18x_K_F2 160.81 131.47 47762 41769 44722 57203 47622 48431 53014 54792 56121 52368 54014 48005 56106 50251 58076 58194 55601 57285 44160 38355 45798 56366 49349 49788 53244 55484 56911 52926 55586 49050 57303 52176 58886 58306 53235 54413 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 308950000 5546 2138 5251 10473;10474;10475 8438;8439 8438 2 9606 Homo sapiens -0.017337217842396058 EANALAAGHPAQAVAINAR Unmodified 1843.9653 0.96529283 859 A0A087WYQ1;O15020-2;O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes no 0 0 0 7.5 0.5 1 1 41.656 41.69 3 2.7643E-05 10139 20230619_1888_Aki_TMTPro18x_K_F8 92.679 76.014 31658 24726 29023 34900 34432 37599 32534 32973 38236 30685 40978 40193 40079 32990 36950 36501 43893 40836 29245 22722 29816 34424 35297 37701 33097 33957 38704 31438 41868 40142 40781 34457 38006 36871 41908 38752 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60067000 5547 859 5252 10476;10477 8440;8441 8441 2 9606 Homo sapiens 0.07706879909665076 EANDALNAYVCK Unmodified 1366.6187 0.61871473 4094 Q68E01-2;Q68E01 INTS3 Integrator complex subunit 3 yes no 0 0 0 5 0 1 51.345 51.42 3 0.00010618 14367 20230619_1885_Aki_TMTPro18x_K_F5 83.573 60.435 67008 55530 60233 68432 70833 69731 79683 76712 93046 85317 88300 86408 105730 84683 88751 98235 99419 92325 61914 50944 61959 68073 72931 70600 80218 78122 93846 85817 91563 87642 106520 88144 91182 98151 94971 87779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59235000 5548 4094 5253 10478 8442 8442 1 9606 Homo sapiens -0.04992988247408903 EANEILQR Unmodified 971.50361 0.50360861 1454;427 P20839-6;B4DNJ7;P20839-5;P20839-7;P20839-3;P20839;P20839-2;P20839-4;Q6ZNB1;A0A024R725;C9J381;B3KRZ3;Q5H9Q6;A0A3B3IRL5;C9K0R9;A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5;B7Z1G4;Q6QE17 IMPDH1;IMPDH;DKFZp781N0678;IMPDH2 Inosine-5'-monophosphate dehydrogenase 1;Inosine-5'-monophosphate dehydrogenase;Inosine-5'-monophosphate dehydrogenase 2 no no 0 0 0 2.5 0.5 1 1 40.141 40.204 2 0.0027232 9879 20230619_1881_Aki_TMTPro18x_K_F2 122.19 45.13 695520 486380 568400 627300 641770 662500 637170 664180 881160 799220 877670 816830 904750 729150 751960 947660 984950 858590 641570 446730 589320 622360 661100 667410 650330 681940 883530 801250 901160 825960 915240 766630 781220 943260 939270 816900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 816960000 5549 427;1454 5254 10479;10480 8443;8444 8443 2 9606 Homo sapiens 0.016716954037519827 EANELQQWINEK Unmodified 1500.7209 0.72087161 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 3.5 0.5 1 1 60.912 60.928 3 8.5788E-10 18675 20230619_1883_Aki_TMTPro18x_K_F4 176.97 155.72 109840 89673 109780 111620 101610 123450 122710 130480 136390 147240 133620 147910 153890 130180 146860 157970 153060 176470 101560 82281 111430 111100 106850 124060 122970 133210 138170 147880 138240 149470 156080 136390 149870 159300 146540 167330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118230000 5550 1022;3868 5255 10481;10482 8445 8445 1 9606 Homo sapiens -0.00945998904148837 EANHSEGQEGSEEADMR Unmodified 1874.7337 0.7336975 1762 A0A8I5KWD5;A0A8I5KUL6;A0A8I5KSI3;A0A8I5KRM5;Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 NEK1 Serine/threonine-protein kinase Nek1 yes no 0 0 0 1 0 1 28.665 28.665 3 0.0053097 5478 20230619_1880_Aki_TMTPro18x_K_F1 67.416 66.592 815.45 0 637.54 1071.8 1122.8 1015.3 0 857.39 904.51 0 812.94 1408.2 1089.3 1522 1900.9 737.23 2131.9 1452.9 747.96 0 670.97 990.08 1099.1 1025.2 0 863.18 863.54 0 856 1368.9 1146.3 1521.8 1924.4 797.72 2032.9 1374.9 1 0 1 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 3188100 5551 1762 5256 10483 8446 8446 1 9606 Homo sapiens -0.1686800036486602 EANLAAIIER Unmodified 1098.6033 0.60332266 2878 E5RGX5;Q93045;B7Z4N6;Q93045-2;B7Z5W7 STMN2 Stathmin;Stathmin-2 yes no 0 0 0 4 0.816 1 1 1 54.725 54.767 2 0.00027755 16070 20230619_1883_Aki_TMTPro18x_K_F4 133.89 92.947 720430 646940 682720 654290 281620 276680 393050 382640 408250 746320 775560 632200 682740 639300 588930 677470 692800 624860 666270 592280 690120 655940 327100 311660 391480 393910 430730 730660 773230 647310 695530 661030 606720 677110 661390 594300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1241300000 5552 2878 5257 10484;10485;10486 8447 8447 1 9606 Homo sapiens 0.05796513017708094 EANLAASFGK Unmodified 1006.5084 0.50835964 425 B4DFL1;E9PEX6;B4DMK9;A0A024R713;P09622;P09622-2;P09622-3 DLD Dihydrolipoyl dehydrogenase;Dihydrolipoyl dehydrogenase, mitochondrial yes no 0 0 0 7.5 0.5 1 1 51.672 51.748 3 0.0017927 14273 20230619_1888_Aki_TMTPro18x_K_F8 87.184 70.346 226640 187040 216010 228560 247910 253830 275080 274500 266660 267760 259560 228490 282670 253160 208170 330460 274450 268740 209500 171590 220880 227800 255480 255280 275520 278760 271970 269780 267390 234890 284380 264300 217340 327020 261910 255930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 460310000 5553 425 5258 10487;10488 8448;8449 8449 2 9606 Homo sapiens 0.005365795465195333 EANLQALIATGGDINAAIER Unmodified 2039.0647 0.064732107 187;2631;2630 Q9UHD9;B4DZF1;B4DZF6;Q59F94;Q9NRR5;D3DVA8;A0A024R258;B3KNI8;B3KNI2;Q9UMX0-2;Q9UMX0;Q9UMX0-3 UBQLN2;UBQLN4;UBQLN1 Ubiquilin-2;Ubiquilin-4;Ubiquilin-1 no no 0 0 0 6.5 0.5 1 1 63.226 63.266 3 6.0039E-05 19600 20230619_1886_Aki_TMTPro18x_K_F6 84.166 67.422 172290 144770 159650 134990 129590 197420 170780 194210 180010 126180 122650 116180 132560 100500 133860 120720 125040 110880 159240 132480 162700 138130 138540 194730 170170 196650 180400 130910 128980 117940 134960 105310 135530 120500 119630 105470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 413370000 5554 2630;2631;187 5259 10489;10490 8450 8450 1 9606 Homo sapiens 0.08676233013102319 EANNFLWPFK Unmodified 1264.6241 0.6240581 3473;3341 P18124;A0A024R814;A8MUD9;O95036 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 no no 0 0 0 2.2 0.748 1 2 2 63.66 63.676 2;3 0.00052773 19966 20230619_1882_Aki_TMTPro18x_K_F3 100.58 53.979 908390 793730 956710 968090 821450 998670 1052700 1066700 1092800 1197600 883370 837200 1167800 941900 883840 1305700 1112100 1138600 840690 727970 966060 964040 870550 1008900 1049400 1088300 1104100 1192200 928240 870320 1169400 987820 918680 1295600 1062000 1083100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2421200000 5555 3473;3341 5260 10491;10492;10493;10494;10495 8451;8452 8452 2 9606 Homo sapiens 0.002331033973405283 EANQAINPK Unmodified 983.50361 0.50360861 3137 P17844;J3KTA4;P17844-2;B4DN41;B4DNG2;A0A0G2JLI4 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 5 0 1 37.928 38.02 2 0.0032188 8708 20230619_1885_Aki_TMTPro18x_K_F5 99.139 65.061 20152 10064 26718 24442 36550 46072 32247 34339 31730 23985 33746 37055 28149 34069 32955 13301 37149 34379 18639 9345.7 26739 23751 37091 44623 32756 35595 32399 25214 34320 36879 29204 34121 33544 14954 35484 32440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20646000 5556 3137 5261 10496 8453 8453 1 9606 Homo sapiens 0.011196954037473006 EANQQQQFNR Unmodified 1261.58 0.57996145 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 3 0.816 1 1 1 30.531 30.607 2 5.5865E-07 5811 20230619_1882_Aki_TMTPro18x_K_F3 186.16 145.13 40129 17559 45649 44010 59741 73138 49222 63976 56160 37872 60003 71785 61916 54345 64368 26126 71415 72971 37041 16330 46121 42599 60707 71444 50505 65240 56898 40720 61562 70665 63256 55184 65578 29459 68272 68806 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 104710000 5557 1022;3868 5262 10497;10498;10499 8454;8455;8456 8455 3 9606 Homo sapiens -0.04036532766917844 EANSIIITPGYGLCAAK Unmodified 1776.908 0.90802046 87 Q2TB59;A0A024R0C3;Q13423;E9PCX7;A0A590UK15;Q8N5H5;B4DS88;B4DMN9 NNT NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 4.5 3.5 1 1 59.583 59.603 3 2.0491E-09 18305 20230619_1880_Aki_TMTPro18x_K_F1 134.85 107.42 59900 55246 65570 71518 60163 74566 76340 75950 73820 76244 74190 73606 88825 74938 76064 79824 73786 76159 55476 50690 66111 70924 63374 75172 75971 77507 75396 76955 76746 74897 89566 77519 77465 79936 70636 72366 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199690000 5558 87 5263 10500;10501 8457;8458 8457 2 9606 Homo sapiens 0.050642765890643204 EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK Unmodified 2914.2952 0.29519815 3524 P29966;Q6NVI1 MARCKS Myristoylated alanine-rich C-kinase substrate yes no 0 0 0 1.71 0.7 3 3 1 47.406 47.45 3;4;5 1.6326E-30 13266 20230619_1880_Aki_TMTPro18x_K_F1 180.35 170.76 403790 299490 405890 424160 364360 465820 407570 402590 491520 458840 494740 552160 524380 494800 502010 580930 595350 688960 373170 275290 411680 418500 383520 466170 411180 417290 496040 463700 509190 554330 533630 516750 516490 588170 569370 652890 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 3955099999.9999995 5559 3524 5264 10502;10503;10504;10505;10506;10507;10508 8459;8460;8461;8462;8463;8464 8459 6 9606 Homo sapiens -0.0853776455469415 EAPAGALAAVLK Unmodified 1109.6445 0.64445919 439 A0A024R7D0;P49366;M0R253;M0QX43;A0A3B3IU31;B4DU50;B4E3M2;Q5J8M5;A0A024R7G5;A0A024R7E9;P49366-2 DHPS Deoxyhypusine synthase yes no 0 0 0 8 0 1 59.495 59.537 3 0.0023389 17597 20230619_1888_Aki_TMTPro18x_K_F8 73.848 54.211 35946 26996 34111 33319 28465 32874 31416 31813 43797 37855 33277 29897 34698 28761 36040 36842 30797 31455 33207 24777 34710 33132 30133 33253 31896 32735 43495 37711 34682 30682 35424 30137 36341 36593 29522 29930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16762000 5560 439 5265 10509 8465 8465 1 9606 Homo sapiens 0.09402274057151772 EAPALVAAGGAPEDDEEDDGRGR Unmodified 2296.0204 0.020360689 4206 Q8IWF6 DENND6A Protein DENND6A yes yes 0 0 1 1 0 1 43.288 43.288 3 9.3628E-27 11570 20230619_1880_Aki_TMTPro18x_K_F1 191.78 188.59 11241 7796.5 8311.3 12798 11764 10238 10404 11418 12138 8854.5 12491 11450 12326 11326 12284 14804 15742 12907 10362 7181.7 8761 12467 11898 10575 10625 11520 12267 9170.2 12787 11523 12594 11862 12696 14707 15009 12290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29222000 5561 4206 5266 10510 8466 8466 1 9606 Homo sapiens -0.07580867661681623 EAPAPPK Unmodified 708.38064 0.38063993 3724 P62750;O95014 RPL23A;WUGSC:H_DJ0855D21.2 60S ribosomal protein L23a yes no 0 0 0 4.5 0.5 1 1 37.022 37.065 2 0.029188 8372 20230619_1883_Aki_TMTPro18x_K_F4 95.62 23.387 43681 24213 51709 59144 68722 82315 55649 74779 69207 44861 64336 78585 65622 60600 61658 32766 80413 76287 40371 22473 52165 57077 69738 81200 57340 76064 69457 47990 66391 77551 66793 61654 63631 35914 76729 72012 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40472000 5562 3724 5267 10511;10512 8467;8468 8467 2 9606 Homo sapiens 0.014784837431420783 EAPAQPAPEK Unmodified 1036.5189 0.51892433 3804 Q15428;Q05DF2;K7EMT0 SF3A2 Splicing factor 3A subunit 2 yes no 0 0 0 3 0 1 37.16 37.214 3 0.0030536 8448 20230619_1882_Aki_TMTPro18x_K_F3 76.843 62.17 29970 19043 30368 31852 43115 50283 34750 40007 45142 34667 45653 50777 39700 40538 42111 31723 52566 42426 27677 17553 31018 31326 43590 49178 35857 41416 45379 35834 46594 50434 40878 41658 43291 32665 50124 40221 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40329000 5563 3804 5268 10513 8469 8469 1 9606 Homo sapiens 0.002125622009543804 EAPASVVPFVR Unmodified 1170.6397 0.63970816 2722 B9A018;Q53GS9;Q53GS9-3;F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 0 0 0 7 0 1 52.607 52.677 2 1.874E-08 14809 20230619_1887_Aki_TMTPro18x_K_F7 174.02 130.25 85430 77827 94615 97612 93775 101660 102390 95941 104960 103000 107620 105190 110830 90768 104540 116130 114250 106690 79121 71389 95355 97009 97642 102370 102840 98633 106910 103790 110430 106230 112700 95447 107010 115740 109170 101470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71149000 5564 2722 5269 10514 8470 8470 1 9606 Homo sapiens 0.06121389914437714 EAPCVLIYIPDGHTK Unmodified 1711.8603 0.86034198 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 6.5 0.5 1 1 56.605 56.671 3 1.2367E-10 16408 20230619_1887_Aki_TMTPro18x_K_F7 154.65 139.11 234940 183750 202760 240830 212100 232740 246940 245330 246520 287860 261470 269320 298820 242160 265860 327220 299200 315310 216940 168720 209030 238370 220510 236240 246980 250920 252060 287960 269280 273360 302170 255260 273110 326600 286060 299550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1289100000 5565 3402 5270 10515;10516 8471;8472;8473 8473 3 9606 Homo sapiens 0.032886223888226596 EAPDGCPDHVLR Unmodified 1364.6143 0.61429805 4651 Q9UBB6-2;Q9UBB6;C9J5H8 NCDN Neurochondrin yes no 0 0 0 2 0 1 35.658 35.715 3 1.0983E-09 7963 20230619_1881_Aki_TMTPro18x_K_F2 172.11 142.34 36414 27321 33292 42238 41971 43515 43189 43509 52269 45679 58671 57126 53587 51764 49288 48275 70516 63267 33630 25138 34263 41417 42937 43894 43754 44518 52947 46412 59655 57294 54710 53377 51355 49416 67214 59959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100900000 5566 4651 5271 10517 8474 8474 1 9606 Homo sapiens -0.053424526703338415 EAPEELLAYEGVR Unmodified 1474.7304 0.73037367 3820 Q12788;A0JLS5;J3KNP2 TBL3 Transducin beta-like protein 3 yes no 0 0 0 2 0 1 57.132 57.149 3 4.2694E-05 17457 20230619_1881_Aki_TMTPro18x_K_F2 115.8 96.982 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5567 3820 5272 10518 8475 8475 1 9606 Homo sapiens 0.011997693813555088 EAPETDTSPSLWDVEFAK Unmodified 2020.9266 0.92656687 4303 Q92665 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 0 0 0 3.5 0.5 1 1 62.488 62.505 3 0.072789 19473 20230619_1882_Aki_TMTPro18x_K_F3 38.057 27.861 43484 41093 46049 49053 51379 55419 52950 53124 63810 57298 57285 58429 58946 55419 60689 62022 61504 65119 40267 37671 46664 48972 52983 55514 53633 54539 64128 57738 59175 59163 60231 57598 61736 62396 58864 61804 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44763000 5568 4303 5273 10519;10520 8476 8476 1 9606 Homo sapiens -0.043059350260364226 EAPPMEKPEVVK Unmodified 1352.701 0.70098779 984 K7EM56;A0A0B4J2B4;S4R417;K7EQJ5;K7ELC2;P62841;S4R456;K7EJ78 RPS15 40S ribosomal protein S15 yes no 0 0 1 5 0.816 2 2 2 46.425 46.493 3;4 3.6549E-05 12392 20230619_1883_Aki_TMTPro18x_K_F4 129.71 111.9 287800 242190 277800 289520 277940 326920 315880 298650 375300 374610 366300 350870 394850 320260 310670 424690 401040 381820 266090 222110 283140 289010 289950 327090 318110 309110 378720 373860 377290 356370 398060 336930 323000 422360 382710 363180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1601799999.9999998 5569 984 5274 10521;10522;10523;10524;10525;10526 8477;8478;8479 8477 3 9606 Homo sapiens 0.03874533831503868 EAPPMEKPEVVK Oxidation (M) 1368.6959 0.69590241 984 K7EM56;A0A0B4J2B4;S4R417;K7EQJ5;K7ELC2;P62841;S4R456;K7EJ78 RPS15 40S ribosomal protein S15 yes no 0 1 1 5.5 0.5 1 1 42.42 42.509 3 0.086611 10488 20230619_1885_Aki_TMTPro18x_K_F5 45.115 29.359 140670 101900 117930 124500 146990 147250 142600 132790 167300 150300 160300 143430 172410 137500 140360 188020 170680 164440 129810 93531 122150 124180 150240 146890 144760 137140 168750 150820 165180 145880 174030 144720 145230 186660 162970 156460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253160000 5570 984 5274 10527;10528 8480 8480 558 1 9606 Homo sapiens 0.026302299688722997 EAPPPVLLTPK Unmodified 1160.6805 0.68051035 1307 P48634;A0A1U9X982;A0A1U9X9A9;A0A1U9X999;A0A1U9X998;A0A1U9X993;A0A1U9X988;A0A1U9X996;A0A1U9X985;A0A1U9X977;A0A1U9X975;A0A1U9X974;A0A1U9X9A5;A0A1U9X987;A0A1U9X972;P48634-3;P48634-2;B4DLY2 PRRC2A Protein PRRC2A yes no 0 0 0 7.5 0.5 1 1 53.932 54.001 3 0.0012681 15361 20230619_1887_Aki_TMTPro18x_K_F7 88.24 78.906 60450 48441 55039 59233 55585 67504 66266 70596 72693 68176 71473 64828 77107 58946 72781 75503 71822 78430 55848 44443 56407 59050 58041 67684 66408 71817 73636 68927 73599 65814 78261 61919 74049 75761 68774 74438 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96116000 5571 1307 5275 10529;10530 8481 8481 1 9606 Homo sapiens 0.10659731234022729 EAPTAYSLLIMHR Oxidation (M) 1516.7708 0.77079869 2042 Q53H22;A8K4H7;Q06203 PPAT Amidophosphoribosyltransferase yes no 0 1 0 1 0 1 51.035 51.035 3 1.8772E-06 14767 20230619_1880_Aki_TMTPro18x_K_F1 136.3 116.69 21841 19506 18836 24535 19513 27194 24652 22538 26704 24563 28260 23343 27217 19849 24526 28726 27436 29000 20184 17894 19439 24386 20404 27175 24615 23411 27135 24687 28841 23664 27661 21078 25172 28724 26233 27536 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69514000 5572 2042 5276 10531 8482 8482 1283 1 9606 Homo sapiens 0.03308412500132363 EAQDDLVK Unmodified 916.45018 0.45017606 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;B7Z9R6 EZR;HEL-S-105 Ezrin yes no 0 0 0 1.5 0.5 1 1 42.482 42.522 2 0.010685 11195 20230619_1880_Aki_TMTPro18x_K_F1 108.81 45.322 60125 30463 61310 81790 115270 113970 74386 95562 98091 82285 100600 98413 99618 75745 94560 59532 116820 103740 55473 28344 63090 78644 114300 112300 78146 98468 98682 84381 103040 98353 101410 78133 97262 62676 111470 98110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140880000 5573 3456 5277 10532;10533 8483 8483 1 9606 Homo sapiens -0.011391020987730371 EAQELSQNSAIK Unmodified 1316.6572 0.65720872 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 3.5 0.5 1 1 43.846 43.903 3 5.8902E-07 11202 20230619_1883_Aki_TMTPro18x_K_F4 148.13 102.25 152580 100670 130340 131250 161650 159610 156460 166130 222460 197650 190950 182850 227530 163290 156030 201930 217670 179970 140740 92499 134700 130430 165320 159430 160070 170020 221670 197680 198830 185650 227520 171250 163550 200950 207400 171310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 710490000 5574 1748 5278 10534;10535 8484 8484 1 9606 Homo sapiens 0.011546406587513047 EAQGNSSAGVEAAEQRPVEDGER Unmodified 2385.0793 0.079272552 722 A0A1U9X8D3;A0A1U9X8D1;A0A1U9X8C7;A0A1U9X8C1;A0A0G2JHC2;A0A024RCJ8;Q6NYC8;Q6NYC8-2 hCG_1821276;PPP1R18 Phostensin yes no 0 0 1 1 0 1 35.183 35.183 3 5.898899999999999E-88 8061 20230619_1880_Aki_TMTPro18x_K_F1 319.88 308.14 43647 35986 39461 52472 63680 68271 58376 58438 69666 60779 53097 55018 65179 46579 45187 66372 56342 58489 40329 33076 40882 51795 64093 67594 59479 60427 69701 61148 55777 55835 65144 49408 47035 65873 53815 55629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71785000 5575 722 5279 10536 8485 8485 1 9606 Homo sapiens -0.057863913673372736 EAQLGNHQICR Unmodified 1324.6306 0.63061682 798 A0A075B7B2;Q9NVK3;Q6MZP1;Q9NV73;A0A994J3X0;Q96AE7-2;Q96AE7 TTC17;DKFZp686D20222 Tetratricopeptide repeat protein 17 yes no 0 0 0 5 0 1 32.477 32.559 3 4.9121E-09 6607 20230619_1885_Aki_TMTPro18x_K_F5 175.49 153.73 15879 12304 16187 16399 21176 20325 19475 17685 21186 18467 21618 20916 20346 13898 23902 16244 25066 19582 14681 11300 16491 16273 21530 20200 19784 18275 21496 18698 22109 20879 20952 14711 24260 16498 23934 18584 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21521000 5576 798 5280 10537 8486 8486 1 9606 Homo sapiens -0.01871326713558119 EAQLYAAQAHLK Unmodified 1341.7041 0.70409934 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;P49321-2;Q5T626;Q5T624;Q9P1N1;O95138;H0YF33;E9PRH9;E9PI86 NASP Nuclear autoantigenic sperm protein yes no 0 0 0 7.5 0.5 1 1 45.956 46.019 3 1.6393E-05 11866 20230619_1888_Aki_TMTPro18x_K_F8 128.21 92.254 240800 205560 227480 232800 244980 273740 246920 234930 257890 222720 249650 203170 258640 205620 236610 267670 264320 254020 222620 188410 232480 233450 253170 272860 249220 242400 261690 225270 256620 207550 262570 215380 242690 267130 252560 241450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2904400000 5577 3605 5281 10538;10539 8487;8488 8487 2 9606 Homo sapiens 0.046915450005371895 EAQNLSAMEIR Oxidation (M) 1276.6082 0.60815004 2081 A8K5W7;Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes no 0 1 0 3 0 1 39.427 39.481 2 0.062236 9394 20230619_1882_Aki_TMTPro18x_K_F3 58.699 51.845 32812 29237 27891 31628 42906 33804 32487 36136 37877 39254 45738 43770 41872 37177 40133 48552 48377 44969 30319 26783 28968 31786 43012 34120 33542 36827 38611 39631 46373 44033 42791 39151 41342 48383 46183 42762 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48432000 5578 2081 5282 10540 8489 8489 1301 1 9606 Homo sapiens -0.019089709018544454 EAQNLSAMEIR Unmodified 1260.6132 0.61323542 2081 A8K5W7;Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 46.403 46.464 2 0.00031118 12539 20230619_1882_Aki_TMTPro18x_K_F3 120.86 63.808 97570 85681 85773 87921 97077 115130 105460 104840 125910 122040 114480 120180 135310 112320 103690 133700 135430 146150 90171 78458 88312 89010 100280 114140 106460 108250 126710 122390 118920 121810 135950 117300 107920 134610 129350 138640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154140000 5579 2081 5282 10541;10542 8490 8490 1 9606 Homo sapiens -0.006646670392228771 EAQNTCAMLTTFNEIDMSNIQEMR Unmodified 2846.2343 0.23433468 390 A0A024R6C9;P36957;Q6IBS5;P36957-2;Q86TQ8;Q86TW7;Q86SW4 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes no 0 0 0 5 0 1 63.416 63.462 3 1.673E-13 19469 20230619_1885_Aki_TMTPro18x_K_F5 133.95 126.92 5522.5 5425 5845.2 7527.1 6668.4 5513.8 8112.5 6279.9 5768.8 8262.8 8551.6 8678.6 8943.1 7137.5 7191.6 7274.9 7750.9 8649.2 5115.4 4980.4 5932.8 7399.4 6876.2 5751 8021.1 6425.2 6130.8 8250 8661.2 8733.6 9026.1 7425.2 7375.2 7386 7416.8 8197.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53158000 5580 390 5283 10543 8491 8491 1 9606 Homo sapiens -0.11493310935475165 EAQQQQHLYR Unmodified 1299.632 0.63199703 4306 Q92793-2;Q92793;O60424 CREBBP;CBP CREB-binding protein yes no 0 0 0 3.5 0.5 1 1 28.676 28.768 3 2.2913E-07 5148 20230619_1883_Aki_TMTPro18x_K_F4 182.46 152.53 15106 10618 14512 16042 19341 23690 20586 21317 22302 19936 23429 17788 22497 18554 18372 15027 27699 21578 13951 9769.5 14879 15845 19759 23303 20735 21891 22657 20165 23901 18192 22798 18946 19246 15537 26369 20448 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18473000 5581 4306 5284 10544;10545 8492 8492 1 9606 Homo sapiens -0.005833693531485551 EAQQYSEALASTR Unmodified 1452.6845 0.68448611 2812 Q5VZR0;D3DRP5;Q9H4G4;B4DQC5 GLIPR2;C9orf19 Golgi-associated plant pathogenesis-related protein 1 yes no 0 0 0 3.5 0.5 1 1 43.894 43.951 2 3.6435E-15 11255 20230619_1883_Aki_TMTPro18x_K_F4 219.74 182.18 44441 35560 40338 42194 40725 42526 49934 45118 57111 49617 58264 57348 61563 47870 49941 63697 62430 59033 41057 32616 41337 42084 42511 43051 50022 46055 57784 50149 59850 57579 62154 50535 51752 63454 59588 56131 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97178000 5582 2812 5285 10546;10547 8493 8493 1 9606 Homo sapiens -0.02374875800865084 EAQTLDSQIQETSI Unmodified 1561.7471 0.74714594 2902 P27816;E7EVA0;P27816-2;A0A024R2V0;P27816-4;Q86Y04;Q8NDS5 MAP4;DKFZp547H1810 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 0 1.5 0.5 1 1 56.954 56.962 2 0.0024972 17389 20230619_1881_Aki_TMTPro18x_K_F2 85.958 70.067 21083 16472 14593 16108 17436 21928 20036 17351 18198 19136 21864 21106 27556 21012 21564 22763 20524 23969 19440 15084 15421 16379 17986 21629 19989 18095 18797 19309 22503 21342 27634 21783 21983 22913 19671 22740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41755000 5583 2902 5286 10548;10549 8494 8494 1 9606 Homo sapiens -0.011257745233251626 EAQTLQQYR Unmodified 1135.5622 0.56218613 1823 A0A8V8TP16;P51692;A0A8V8TM91;A0A8V8TMR0;A0A8V8TP21;A0A8V8TP00;A0A8V8TM84;Q59H39;A0A8V8TMP4;P42229;A0A384N5W4;A8K6I5;A0A7I2YQY3;Q8WWS9;K7EK35;A0A7I2V380;Q59GY7;Q8WW55;A0A7I2YQF1;K7EIF9;P42229-2 STAT5B;STAT5A Signal transducer and activator of transcription 5B;Signal transducer and activator of transcription;Signal transducer and activator of transcription 5A yes no 0 0 0 4 0 1 38.199 38.241 2 1.7245E-07 8818 20230619_1883_Aki_TMTPro18x_K_F4 155.42 136.64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5584 1823 5287 10550 8495 8495 1 9606 Homo sapiens -0.0001724802177704987 EAQVYQAFK Unmodified 1082.5397 0.53965977 4365 Q96I99;Q3ZCW5;E9PDQ8;Q96I99-2;B7Z2D5 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 7 0 1 50.819 50.897 3 0.001822 13998 20230619_1887_Aki_TMTPro18x_K_F7 91.584 62.841 272090 218700 227270 247080 263680 324850 283630 285270 380920 257790 259470 257710 310580 240750 249300 328030 302790 290500 251220 200490 235320 248240 272090 321610 287690 293370 377390 262320 274090 261270 312410 253580 257960 325900 289100 276360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108590000 5585 4365 5288 10551 8496 8496 1 9606 Homo sapiens 0.0016915258061089844 EARDEYHCK Unmodified 1206.5088 0.50877035 260 A0A024R3R5;Q14739 LBR Lamin-B receptor yes no 0 0 1 2 0 1 28.292 28.366 4 0.057624 5155 20230619_1881_Aki_TMTPro18x_K_F2 61.65 40.186 9909 4568.8 16696 11871 20975 11564 12346 18696 9342.7 7827.2 15416 15374 10607 11028 13867 5091 15043 10908 9189.6 4250.5 16411 11390 21098 11894 12894 18300 9922 8703.2 15328 15115 11143 11198 14057 5569.8 14353 10314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4341200 5586 260 5289 10552 8497 8497 1 9606 Homo sapiens -0.08622368795954571 EASDPQPEEADGGLK Unmodified 1541.6845 0.68454569 3638 P52907;A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 yes no 0 0 0 1.5 0.5 1 1 43.151 43.192 3 4.0318000000000004E-25 11478 20230619_1880_Aki_TMTPro18x_K_F1 220.21 192.8 653320 501580 561970 621520 689890 747240 710040 739490 871590 855440 950900 906380 956840 769650 837670 1044500 1067000 948230 603170 460320 580770 619460 707350 745920 719780 758860 881930 859870 971700 913730 970620 812970 867650 1039200 1017900 902090 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1241300000 5587 3638 5290 10553;10554 8498;8499;8500 8498 3 9606 Homo sapiens -0.06462920591548027 EASEVKPPR Unmodified 1011.5349 0.53490874 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5KV76;A0A8I5KRF4;A0A8I5KSH0;A0A8I5KVZ4;A0A8I5KQU6;A0A8I5KRC9;A0A8I5KTR5;A0A8I5KPV0 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 1 4.5 0.5 1 1 33.557 33.627 3 0.0012976 6926 20230619_1883_Aki_TMTPro18x_K_F4 97.565 82.896 77865 40441 80918 90332 96832 105800 86338 91467 122320 89129 134690 158100 145760 129700 105680 75257 182990 177320 71858 37486 82232 87212 99090 105390 88803 94406 122910 92377 138190 156230 146610 131940 112240 82321 174300 167360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57957000 5588 1785 5291 10555;10556 8501;8502 8501 2 9606 Homo sapiens 0.02960268437857394 EASFEYLQNEGER Unmodified 1570.69 0.68996541 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49;Q59FY4;O00763;O00763-2;O00763-3;B4DYM0;Q59GJ9;B4DYJ7;F8W8T8;Q4G170;H0YGH5 ACACA;hCG_30204;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase yes no 0 0 0 1 0 1 49.762 49.762 2 2.4299E-07 14284 20230619_1880_Aki_TMTPro18x_K_F1 152.85 141.32 17671 16933 16867 18188 10500 12177 12876 15109 13295 20608 20322 18948 23813 16847 16940 26648 23430 19464 16351 15507 17109 18198 11480 12847 12885 15383 13833 20462 20655 19257 23846 17971 17757 26189 22327 18578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20837000 5589 3833 5292 10557 8503 8503 1 9606 Homo sapiens -0.07255197009044423 EASGILK Unmodified 716.40685 0.40685468 4674;4287 Q9UK45;J3QRN1;Q8WXE0-2;Q8WXE0 LSM7;CASKIN2 U6 snRNA-associated Sm-like protein LSm7;Caskin-2 no no 0 0 0 6 0 1 44.057 44.148 2 0.015623 11270 20230619_1886_Aki_TMTPro18x_K_F6 111.04 47.888 363570 193260 348220 359590 446000 458200 387960 416620 500980 325010 422210 394150 428770 343610 406510 218040 501420 419240 335330 178570 356480 350480 453930 454660 398070 425950 500220 335830 436980 395120 436290 349880 417860 233040 478270 396360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 414040000 5590 4674;4287 5293 10558 8504 8504 1 9606 Homo sapiens 0.03730752914611912 EASILLGD Unmodified 816.4229 0.42289868 4560 Q9NPD3 EXOSC4 Exosome complex component RRP41 yes yes 0 0 0 1.5 0.5 1 1 60.4 60.406 2 0.050883 18810 20230619_1881_Aki_TMTPro18x_K_F2 70.912 53.986 31702 23881 31384 35559 27975 33191 33273 34336 35523 37217 38351 43792 38509 34775 40964 46219 42684 43841 29297 21963 31884 34906 29486 33752 33327 35086 36184 37645 39271 43848 39430 36754 41737 46115 40831 41662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73878000 5591 4560 5294 10559;10560 8505 8505 1 9606 Homo sapiens 0.007344143608634113 EASLGEASK Unmodified 890.43453 0.434526 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 3 0 1 39.962 40.018 2 0.0061903 9599 20230619_1882_Aki_TMTPro18x_K_F3 92.051 27.484 33614 22448 42596 43413 71287 68416 54585 73916 60049 39138 72521 76336 51928 50221 66195 28439 73943 72191 31115 20730 42950 42420 71222 67378 56224 74129 61241 42534 72967 74885 54368 51525 67272 31503 70661 68110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36903000 5592 2337;3778;3779 5295 10561 8506 8506 1 9606 Homo sapiens -0.015073886158120331 EASMVITESPAALQLR Unmodified 1714.8924 0.89237039 501 B4E2V5;B4DZK8;A0A024R882;P27105-2;P27105 STOM Erythrocyte band 7 integral membrane protein yes no 0 0 0 6 0 1 58.407 58.473 3 0.014402 17506 20230619_1886_Aki_TMTPro18x_K_F6 59.421 48.316 61078 51949 59987 60284 65370 59704 69537 69518 72186 66384 68317 58177 61505 44671 75009 59229 58531 49537 56483 47626 61097 60222 67477 60687 69961 70252 73224 66990 69945 59004 63557 47322 75037 58802 56099 47186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25111000 5593 501 5296 10562 8507 8507 1 9606 Homo sapiens 0.06351990072039371 EASPNPEDGIVR Unmodified 1282.6153 0.61534391 3230 O15031 PLXNB2 Plexin-B2 yes yes 0 0 0 1 0 1 40.345 40.345 2 1.8977E-06 10255 20230619_1880_Aki_TMTPro18x_K_F1 150.09 116.9 31808 25508 30764 31257 30542 31540 35309 33101 43008 40351 48560 50473 44906 40412 39064 41656 46432 44941 29400 23403 31336 31106 31863 31918 35564 33915 43575 40701 49404 50420 45685 42069 40246 42025 44345 42656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27294000 5594 3230 5297 10563 8508 8508 1 9606 Homo sapiens -0.014659150297802626 EASRPPEEPSAPSPTLPAQFK Unmodified 2235.1172 0.11716161 991 B3KTK5;Q53GS8;H0Y3X6;B3KM78;A0A0C4DFX9;Q9H3P2;B3KSP0;Q9H3P2-7 NELFA;WHSC2 Negative elongation factor A yes no 0 0 1 6 0 1 49.473 49.551 4 0.0066933 13693 20230619_1886_Aki_TMTPro18x_K_F6 67.928 46.329 66205 62536 63165 73221 64567 68482 72080 67048 80797 79043 90524 82780 87297 83258 88215 83613 83525 93489 61253 57317 64497 73008 67145 69604 72515 68955 82188 79375 92240 83909 89284 85863 89407 84597 80031 88655 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133780000 5595 991 5298 10564 8509 8509 1 9606 Homo sapiens 0.049007713560968114 EASSCAVNLVLR Unmodified 1317.6711 0.67108465 1812 X5D7P8;A0A8V8TKT5;Q6E0B2;X5DP03;X5D2U3;Q9UEW8-2;Q9UEW8 STK39 STE20/SPS1-related proline-alanine-rich protein kinase yes no 0 0 0 7.5 0.5 1 1 50.949 51.027 2 2.6782E-05 13954 20230619_1888_Aki_TMTPro18x_K_F8 142.94 123.33 131030 105820 111880 115490 88919 109120 114340 104010 123000 159320 138450 143580 162320 129280 126430 175250 156170 159770 121000 96984 114920 115810 94994 110740 114110 108130 125640 157510 142370 145960 163170 136300 131100 174350 149160 151900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161750000 5596 1812 5299 10565;10566 8510 8510 1 9606 Homo sapiens 0.02495594886181607 EASSSACDLPR Unmodified 1191.519 0.51900068 2440 B3KXN9;Q96SZ5 ADO 2-aminoethanethiol dioxygenase yes no 0 0 0 2 0 1 35.448 35.505 2 5.3343E-17 7867 20230619_1881_Aki_TMTPro18x_K_F2 235.66 225.43 53400 36663 56050 55239 52517 57452 51077 49378 74919 71651 76422 79087 81693 64262 63665 63214 94299 82409 49348 33737 56649 54268 54826 57733 52341 51616 75038 71466 78554 79385 82345 66777 66733 64622 89846 78113 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46281000 5597 2440 5300 10567 8511 8511 1 9606 Homo sapiens -0.0690980586139176 EASSTQDTGKLPVK Unmodified 1459.7518 0.75183739 2025 B5BU52;B2R6Q4;A8K3B6;P41240;B4DMZ0;B4DP99 CSK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase CSK yes no 0 0 1 7 0 1 42.424 42.499 3 0.0081243 10277 20230619_1887_Aki_TMTPro18x_K_F7 78.486 67.852 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5598 2025 5301 10568 8512 8512 1 9606 Homo sapiens 0.040351544100758474 EASSVSEELHK Unmodified 1214.5779 0.57789577 1260 A0A1B0GVH5;A0A1B0GTC3;B3KU60;Q9C0B1;A0A1B0GUC3;A0A1B0GU26;A0A1B0GTC5;A0A1B0GV98;A0A1B0GTY1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes no 0 0 0 3 0 1 40.786 40.845 3 4.3149E-09 9961 20230619_1882_Aki_TMTPro18x_K_F3 153.34 118.45 55939 50297 60042 57006 69822 71021 69306 60545 70623 59880 72924 67042 60023 45385 64800 53996 70236 65549 51789 46093 60776 57220 71664 70543 69942 62585 71912 60782 74122 67005 61858 48026 66046 54804 67116 62153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26604000 5599 1260 5302 10569 8513 8513 1 9606 Homo sapiens -0.020810062953842134 EATAGNPGGQTVR Unmodified 1256.6109 0.61092723 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 3.5 0.5 1 1 30.715 30.79 2 2.1657E-07 5851 20230619_1883_Aki_TMTPro18x_K_F4 185.25 151.99 19397 10740 28446 22194 46156 57734 30644 39547 35142 26771 43780 57620 39445 42571 44543 19097 47038 47580 17968 9938.3 28378 21910 46162 55211 31970 41269 35856 28694 44429 56498 40691 43144 45196 21257 44986 44888 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61874000 5600 2980 5303 10570;10571 8514;8515 8515 2 9606 Homo sapiens -0.007113794526730999 EATDAIGHLDR Unmodified 1196.5786 0.57856447 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;Q59GP7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 2.5 0.5 1 1 39.184 39.245 3 6.502999999999999E-40 9407 20230619_1881_Aki_TMTPro18x_K_F2 247.96 185.37 245790 182420 214500 242290 274840 294670 267570 269390 362880 279630 333820 304690 325560 255470 285770 316060 318100 306520 226910 167560 221570 240370 280690 293390 273090 277210 362810 283010 343230 306690 330520 268420 293240 316030 303960 291270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2500200000 5601 3823 5304 10572;10573 8516;8517 8516 2 9606 Homo sapiens -0.011861668557003213 EATDPRPCEVENAVESWR Unmodified 2143.9593 0.95928076 1928 Q53GE2;Q53GC7;A4D0V4;P47755;C9JUG7;F8W9N7;P47755-2;B4DE01 CAPZA2 F-actin-capping protein subunit alpha-2 yes no 0 0 1 2.5 0.5 1 1 51.791 51.843 3 5.5704E-07 15221 20230619_1881_Aki_TMTPro18x_K_F2 117.07 108.98 83429 66573 87526 90467 67604 80912 72746 69925 91527 88940 85891 75955 90101 75197 97306 96217 96454 93709 77164 61147 88278 89254 72007 82276 73682 72749 91976 88507 88533 77718 92160 78727 98765 96216 92276 89042 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 146760000 5602 1928 5305 10574;10575 8518;8519 8518 2 9606 Homo sapiens -0.06694051174827109 EATELWGK Unmodified 932.46035 0.46034682 4545 Q9HB40;B4DP22;Q9HB40-2 SCPEP1 Retinoid-inducible serine carboxypeptidase yes no 0 0 0 4.5 0.5 1 1 51.869 51.92 2 0.0020288 14565 20230619_1885_Aki_TMTPro18x_K_F5 144.38 114.19 144130 127840 136320 164630 194090 228690 235970 237970 298040 206060 228040 217560 194740 173630 180230 205730 233970 212630 133280 117300 140260 164040 198350 226500 237210 241510 296940 210450 235700 218910 199270 182220 186630 206550 223200 201960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 119710000 5603 4545 5306 10576;10577 8520;8521 8521 2 9606 Homo sapiens -0.008584943735286288 EATGHFQESEPFSHIDPEESEETR Unmodified 2787.1896 0.18961086 2356 B4E0B7;B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 1 0 1 45.392 45.392 4 1.143E-35 12464 20230619_1880_Aki_TMTPro18x_K_F1 217.93 207.81 12884 6924.6 13774 15034 12078 12059 14561 15607 13254 15203 15219 15169 15749 12825 17773 14728 14223 15773 11895 6414.1 13898 14467 12727 12490 14508 15689 13665 15373 15555 15320 16142 13413 17825 14839 13653 14964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56608000 5604 2356 5307 10578 8522 8522 1 9606 Homo sapiens -0.13249635889633282 EATNDDPWGPSGQLMGEIAK Unmodified 2114.9579 0.95788377 1109 A0A0S2Z4Y4;A0A0S2Z5H3;Q14677;Q14677-3;Q14677-2 CLINT1 Clathrin interactor 1 yes no 0 0 0 3.67 0.471 1 2 61.989 62.006 3 2.2083E-05 19270 20230619_1882_Aki_TMTPro18x_K_F3 92.31 81.472 18262 13924 16577 17721 17961 19090 16260 16831 23895 17643 17277 19623 20864 18755 22010 21346 19483 22469 16866 12783 17003 17600 18515 19150 16730 17375 23638 17866 18216 19799 21242 19508 22219 21475 18686 21319 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158240000 5605 1109 5308 10579;10580;10581 8523;8524 8523 2 9606 Homo sapiens -0.05499685263612264 EATNPPVIQEEK Unmodified 1353.6776 0.67760981 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KPY2;B4DDM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 2.5 0.5 1 1 44.153 44.23 2 7.0773E-10 11756 20230619_1881_Aki_TMTPro18x_K_F2 203.51 112.89 50534 37105 35458 42671 43831 53159 46897 47636 80109 62246 63882 83334 82025 74611 48021 111230 110890 128700 46582 34034 37450 42770 45093 52828 48100 49436 79047 62827 67173 83372 81651 79182 53254 111940 105610 121990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 93863000 5606 2389 5309 10582;10583 8525;8526 8525 2 9606 Homo sapiens 0.014918113185785842 EATNPPVIQEEKPK Unmodified 1578.8253 0.82533668 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KPY2;B4DDM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 1 4.29 1.03 2 2 2 1 43.269 43.338 3;4 1.0654E-08 11052 20230619_1882_Aki_TMTPro18x_K_F3 157.8 139.06 330770 253060 306530 307720 361560 396640 385770 362650 444100 407140 453660 453750 441470 371660 439390 446850 469540 421470 305550 232200 314260 307480 371930 393570 389280 374010 449370 410590 464520 455760 450840 389990 448520 446460 448630 400760 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1853099999.9999998 5607 2389 5310 10584;10585;10586;10587;10588;10589;10590 8527;8528;8529;8530 8527 4 9606 Homo sapiens 0.05907702852550756 EATTDFTVDSRPLTQVGGDHIK Unmodified 2386.1765 0.1764674 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 1 5.5 0.5 1 1 49.453 49.53 4 3.1173E-23 13701 20230619_1886_Aki_TMTPro18x_K_F6 185.71 169.77 56123 45404 54413 53074 45154 56423 59942 56521 64168 65677 65069 69603 72116 58839 64599 77282 78394 72382 51878 41637 55281 53035 48081 56796 59720 57991 65183 65996 67061 70116 73020 62025 66649 77054 74832 68823 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173840000 5608 3299 5311 10591;10592 8531 8531 1 9606 Homo sapiens 0.03882622579567396 EATTEFSVDAR Unmodified 1224.5622 0.5622457 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 0 0 1.5 0.5 1 1 43.339 43.38 2 3.0427000000000003E-30 11367 20230619_1881_Aki_TMTPro18x_K_F2 269.14 228.15 322060 259090 274600 299400 442600 477220 395390 373630 491350 385210 449210 465350 415100 384520 419650 428640 448890 440890 297410 237580 285600 301310 445340 466730 404120 389100 493120 391430 461520 466020 425210 401440 428310 430760 429150 418650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 726080000 5609 3484 5312 10593;10594 8532;8533 8533 2 9606 Homo sapiens -0.04105292812414518 EATVPCSATGR Unmodified 1147.5292 0.52917144 3847 Q13308;Q13308-6;Q13308-4;Q13308-5;Q59FV9 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 3.5 0.5 1 1 34.286 34.342 2 2.1227E-08 7239 20230619_1883_Aki_TMTPro18x_K_F4 171.33 140.74 52965 24954 60482 53088 81322 92882 67051 82381 81468 65884 94619 119590 86561 90539 96372 39423 99162 106370 48903 23125 61085 51781 82464 90579 68934 84380 82627 69109 96301 117780 89163 91633 97654 44391 94901 100300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109760000 5610 3847 5313 10595;10596 8534;8535 8535 2 9606 Homo sapiens -0.03869198136112573 EATWTMSNITAGR Unmodified 1436.6718 0.67181293 1653 A0A7I2V351;A0A7I2V487;Q7Z726;A8K7D9;A0A7I2YQE1;P52292;A0A7I2V3Z3 KPNA2 Importin subunit alpha;Importin subunit alpha-1 yes no 0 0 0 7.5 0.5 1 1 52.216 52.292 2 1.4875E-15 14523 20230619_1888_Aki_TMTPro18x_K_F8 254.19 219.81 133400 94888 123360 129280 75173 143910 125010 115590 172580 172410 136200 107460 171730 123430 107910 179610 144010 139220 123170 87197 125540 127870 83825 143590 124610 121560 171750 169320 142710 112700 171000 129880 113240 177100 137400 132680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187400000 5611 1653 5314 10597;10598 8536 8536 1 9606 Homo sapiens -0.02905610464745223 EATWVVDVK Unmodified 1045.5444 0.5444108 1485 B4E0J3;H0YF61;B2R761;A0A384NY87;P22307-6;P22307-2;P22307-4;P22307-7;P22307-8;P22307 SCP2 Non-specific lipid-transfer protein yes no 0 0 0 5.5 0.5 1 1 55.779 55.848 3 0.037259 16206 20230619_1885_Aki_TMTPro18x_K_F5 53.756 31.764 33376 25960 36830 36975 35372 36610 37129 36303 39618 37477 37693 32398 42607 33060 37337 41098 46652 39043 30879 23859 37100 36426 36872 37039 37425 37146 40152 37666 38945 33175 43068 34525 38590 41045 44494 37133 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81968000 5612 1485 5315 10599;10600 8537 8537 1 9606 Homo sapiens 0.023460367233838042 EAVAMESYAK Oxidation (M) 1113.5012 0.50122535 3756 V9HW96;P78371;F5GWF6;P78371-2;B7Z4R3;Q9H369 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 1 0 3.5 0.5 1 1 41.191 41.242 2 0.00020995 10129 20230619_1882_Aki_TMTPro18x_K_F3 133.99 120.96 92579 69387 88376 101150 120280 116170 96336 104410 158050 105390 131170 117520 112060 96909 114380 113540 130350 122370 85529 63799 90648 99676 121780 116070 100420 107490 156250 106950 134890 118120 115120 101520 117140 114340 124510 116170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148570000 5613 3756 5316 10601;10602 8538 8538 2424 1 9606 Homo sapiens -0.050985211162242194 EAVAMESYAK Unmodified 1097.5063 0.50631073 3756 V9HW96;P78371;F5GWF6;P78371-2;B7Z4R3;Q9H369 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 4 0 1 47.479 47.521 2 2.9537E-07 12826 20230619_1883_Aki_TMTPro18x_K_F4 190.02 142.15 238070 185740 198260 219290 253700 262230 223880 244960 365450 274340 287660 252860 297770 245860 258010 300480 311460 254030 219770 170370 205620 219280 258590 261590 231800 252120 360960 275300 298910 257620 301740 256720 266220 298390 297090 241980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 264040000 5614 3756 5316 10603 8539 8539 1 9606 Homo sapiens -0.03854217253592651 EAVAPVQEESDLEK Unmodified 1542.7413 0.74133228 3849 Q13409-2;Q13409-3;Q13409-6;Q13409;Q13409-5;Q13409-7;A0A140VKE9;B4DPZ3;E7EQL5;E7EV09;E7EQU2;E7EMU4;E7ESD3;E7ETL8;E9PGG1;E7ET01;E7ERH4;E7ERR6;E7EUM4;E7EU01;Q53SA6 DYNC1I2;DNCI2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 0 1.5 0.5 1 1 48.273 48.309 3 1.0499E-08 13642 20230619_1881_Aki_TMTPro18x_K_F2 153.7 125.61 161800 134590 156460 180040 160880 183670 152800 158740 185950 192960 209420 231530 233340 197950 191490 263820 256540 279970 149590 123580 159580 178060 166660 184860 155650 164860 188580 194360 214920 232200 235460 208780 199450 264720 244990 265660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 704460000 5615 3849 5317 10604;10605 8540 8540 1 9606 Homo sapiens -0.008328730350058322 EAVCEVALDYKK Unmodified 1423.7017 0.70171607 2337 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 1 6 0 1 50.843 50.92 3 0.00078469 14312 20230619_1886_Aki_TMTPro18x_K_F6 91.914 70.357 104290 87246 90821 98458 95661 93040 111180 107640 125770 121310 120120 125630 128930 94206 114090 131480 137670 138970 96342 79971 93490 98488 99336 94893 111640 109340 127100 121970 123930 126260 130520 100270 117670 131890 131510 131910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168600000 5616 2337 5318 10606 8541 8541 1 9606 Homo sapiens 0.006813284805730291 EAVCIVLSDDTCSDEK Unmodified 1839.7866 0.78664427 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1;A0A7P0TBK7;A0A7P0Z4D1;A0A7P0T946;A0A7P0T971 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 0 3 0 1 56.158 56.195 3 2.5849E-08 16877 20230619_1882_Aki_TMTPro18x_K_F3 134.25 125 18013 15108 21448 21829 20829 22062 22588 20401 28211 26764 26360 23997 25652 21121 23244 25831 24480 23864 16685 13883 21494 21490 21722 22252 22845 21135 28348 26631 27082 24392 26084 22134 23761 25767 23406 22690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12514000 5617 3656 5319 10607 8542 8542 1 9606 Homo sapiens -0.0996575862645841 EAVDLANR Unmodified 886.45084 0.45084476 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A494C1D7;Q03001-9;B4DSS9;Q03001-3;Q6P0N6 DST Dystonin yes no 0 0 0 2.5 0.5 1 1 38.138 38.196 2 0.010701 8916 20230619_1881_Aki_TMTPro18x_K_F2 98.009 50.16 43198 29810 44254 53167 62768 73698 51626 50383 71412 57785 66512 67264 72371 62977 63869 47609 82857 76011 39913 27492 45202 51965 63504 72380 53299 53287 71410 58356 68724 67662 73299 64330 66043 49739 79046 71920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93854000 5618 1693 5320 10608;10609 8543 8543 1 9606 Homo sapiens 0.003077373409496431 EAVEENGVITDK Unmodified 1302.6303 0.63032527 4376 V9HWH0;Q96KB5;Q96KB5-2 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase yes no 0 0 0 2 0 1 45.423 45.504 3 0.029716 12374 20230619_1881_Aki_TMTPro18x_K_F2 52.555 35.981 111760 80239 125870 124310 146450 175000 145260 146900 184980 132470 149050 158810 148550 127040 142300 127310 174570 157070 103370 73845 127020 122520 150580 172360 147740 151600 184600 135570 154660 158880 151380 132140 146500 129660 166600 148940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56585000 5619 4376 5321 10610 8544 8544 1 9606 Homo sapiens -0.008884679524499006 EAVELPLTHFELYK Unmodified 1687.8821 0.88212328 2016 A8K2M0;P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 6 0 1 61.659 61.713 3 6.6506E-13 18883 20230619_1886_Aki_TMTPro18x_K_F6 193.16 152.58 180080 142960 167250 198760 173550 210780 193940 199230 225530 236690 206410 227180 231820 187930 207200 250640 222220 243920 166390 131340 171280 196200 180530 211870 195360 205330 227390 236880 213930 229640 234570 198510 212200 250360 212630 231670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 293910000 5620 2016 5322 10611 8545 8545 1 9606 Homo sapiens 0.0656975040906218 EAVFATCGQQVDIWDEQR Unmodified 2150.9691 0.96911716 801 A0A087WT20;Q9NV06;A0A087X1F8;B3KME9;E5RHM4 DCAF13 DDB1- and CUL4-associated factor 13 yes no 0 0 0 3 0 1 59.993 60.021 3 1.1811E-18 18446 20230619_1882_Aki_TMTPro18x_K_F3 176.28 167.57 13780 14431 14433 17470 13622 14196 16675 16867 18907 17665 18098 19372 21405 14229 17413 19550 17303 17568 12769 13226 14613 17351 14287 14670 16707 17074 19103 17856 18758 19412 21522 15142 17782 19445 16558 16706 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13762000 5621 801 5323 10612 8546 8546 1 9606 Homo sapiens -0.06032863169457414 EAVFDDDMEQLR Unmodified 1466.6348 0.63475872 1818 Q7Z460;Q7Z460-3;Q7Z460-5;Q7Z460-4;Q7Z460-2;A0A8V8TLP7;F8WA11;A0A8V8TQK9;A0A8V8TRF6;H0Y5T1;B7Z4E5;B7Z7Q8;B7Z5R7;Q68D09;B7Z2P0;B7Z7C4 CLASP1;DKFZp686D1968 CLIP-associating protein 1 yes no 0 0 0 1 0 1 54.859 54.859 2 0.00015832 16359 20230619_1880_Aki_TMTPro18x_K_F1 114.86 96.702 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5622 1818 5324 10613 8547 8547 1 9606 Homo sapiens -0.07989326801157404 EAVFFQSHSAR Unmodified 1277.6153 0.61528433 3559 P36954 POLR2I DNA-directed RNA polymerase II subunit RPB9 yes yes 0 0 0 7.5 0.5 1 1 40.841 40.872 3 1.4832E-05 9604 20230619_1887_Aki_TMTPro18x_K_F7 142.04 120.17 120920 109130 120470 117580 149980 178700 147510 139790 228670 77535 69471 77409 85467 59839 82993 78421 102660 69791 111880 99959 122870 118870 153640 175140 151210 143830 221560 82040 79521 78020 86630 63334 85476 78048 97802 66499 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115520000 5623 3559 5325 10614;10615 8548 8548 1 9606 Homo sapiens -0.01241870239095988 EAVGDLLDAFK Unmodified 1176.6027 0.60265396 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;A0A6Q8PFB2;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;C9J2Z7;C9K073 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 6 0 1 63.737 63.783 3 5.2743E-05 19814 20230619_1886_Aki_TMTPro18x_K_F6 125.74 106.96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5624 1676;2901 5326 10616 8549 8549 1 9606 Homo sapiens 0.021416735779894225 EAVLLLK Unmodified 784.50584 0.50584045 3558 Q59GY2;P36578;H3BM89;B4DMJ2;Q53G74;B4DFI6;H3BTP7 RPL4 60S ribosomal protein L4 yes no 0 0 0 7.5 0.5 1 1 57.033 57.087 2 0.016136 16613 20230619_1887_Aki_TMTPro18x_K_F7 110.35 24.499 3141400 2611800 2671000 2938000 2841100 3266200 1356000 3340900 3130200 3601600 2303100 2840000 3853300 2805600 1658700 6103100 1375400 3598700 2901500 2394000 2754700 2945500 2904900 3279900 1515200 3408200 3064400 3601400 2469500 2921300 3775700 3068300 1735800 5925300 1334100 3436500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4336500000 5625 3558 5327 10617;10618 8550;8551 8550 2 9606 Homo sapiens 0.10496775879505549 EAVLLNLK Unmodified 898.54877 0.54876789 1906 A1MA90;Q9H9J2 MRPL44 39S ribosomal protein L44, mitochondrial yes no 0 0 0 8 0 1 57.654 57.706 3 0.00068985 16812 20230619_1888_Aki_TMTPro18x_K_F8 117.04 53.556 47388 40448 37066 47624 57028 68671 55508 61014 81459 30843 29424 26607 30001 24021 36074 33845 34870 28624 43751 37087 38889 47764 57735 67640 56801 62021 79286 32763 32656 27165 30909 25386 36494 33569 33332 27265 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37256000 5626 1906 5328 10619 8552 8552 1 9606 Homo sapiens 0.09543545936946884 EAVQLVNTREEVEDLCR Unmodified 2059.0004 0.0004172906 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 1 2.5 0.5 1 1 50.631 50.693 3 2.8035E-30 14438 20230619_1882_Aki_TMTPro18x_K_F3 235.73 189.43 148660 141670 146330 144870 147460 146860 158430 158800 153800 181950 161110 144840 186920 140610 163940 202960 187840 190240 137590 129690 148830 146190 153210 148760 159030 161990 157460 181440 165990 148700 188760 148600 168650 202100 179510 180820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1088100000 5627 3654 5329 10620;10621 8553;8554 8554 2 9606 Homo sapiens 0.013277098646540253 EAVRPGVLR Unmodified 995.58761 0.58761301 2440 B3KXN9;Q96SZ5 ADO 2-aminoethanethiol dioxygenase yes no 0 0 1 5.33 3.09 1 1 1 34.041 34.067 3 0.00075731 7116 20230619_1888_Aki_TMTPro18x_K_F8 110.76 90.469 118070 94305 127500 136610 129330 149790 139010 132060 165580 161080 184760 183270 171330 142680 157740 168920 199430 178300 109230 86681 128830 134600 134510 150010 140450 136960 167900 161920 188050 183660 174650 149920 162990 169830 190260 169330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65247000 5628 2440 5330 10622;10623;10624 8555;8556 8556 2 9606 Homo sapiens 0.08964271291324621 EAVTEILGIEPDREK Unmodified 1697.8836 0.88357984 2916 E9PGT1;Q15631;B3KRM8;H7C1D4;B7Z5D9;Q53GR3 TSN Translin yes no 0 0 1 5 0.816 1 1 1 56.939 56.985 3 2.6295E-10 16606 20230619_1885_Aki_TMTPro18x_K_F5 145.94 114.94 161820 142760 163500 171840 159540 189850 162490 173200 208730 208100 208860 203420 214200 193190 207990 222550 222320 235930 149710 130910 165940 171390 166290 190220 165180 179000 210090 208340 214490 206390 218230 201160 212490 223890 212670 223890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1459899999.9999998 5629 2916 5331 10625;10626;10627 8557 8557 1 9606 Homo sapiens 0.06255339707195162 EAVTFLR Unmodified 834.45995 0.45995289 390 A0A024R6C9;P36957;Q6IBS5;P36957-2;Q16187 DLST;E2k Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes no 0 0 0 6.5 0.5 1 1 47.889 47.973 2 0.0084502 12648 20230619_1887_Aki_TMTPro18x_K_F7 120.65 66.935 436630 384310 408830 473090 534090 623290 577010 553510 774840 489520 449480 446410 503710 395610 498420 491590 509640 514830 403720 352490 420030 472320 546640 617130 584880 568500 764460 497520 478900 453510 512070 415110 507490 493790 487550 488720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 291550000 5630 390 5332 10628;10629 8558;8559 8559 2 9606 Homo sapiens 0.03610130697268232 EAVTHIGR Unmodified 881.47191 0.47191456 3393 P06730;P06730-2;Q32Q75;X5D7E3;D6RBW1;P06730-3 EIF4E Eukaryotic translation initiation factor 4E yes no 0 0 0 4.5 0.5 1 1 30.997 31.068 2 0.0084127 6070 20230619_1885_Aki_TMTPro18x_K_F5 104.75 77.626 58104 37784 56717 59990 73013 73534 62920 71721 91008 71392 84697 80041 81217 73063 71763 49603 95169 89562 53648 34800 57982 58908 74280 73272 64910 73350 90807 72477 86990 80577 82598 74406 74298 52541 90792 84664 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 72489000 5631 3393 5333 10630;10631 8560;8561;8562 8562 3 9606 Homo sapiens 0.02643747440470179 EAVTTLK Unmodified 760.43307 0.43306943 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJA1;A0A804HKK7;A0A804HKX6 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 6 0 1 43.198 43.292 2 0.0074835 10903 20230619_1886_Aki_TMTPro18x_K_F6 124.83 19.444 404330 191200 476070 485430 646020 722820 530920 645490 551130 449560 700480 854220 650610 605570 708470 276000 778240 747190 373430 177770 480250 468540 654320 710360 543110 659220 565710 477050 710730 839200 668600 615610 720740 310550 743720 704800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221040000 5632 1723 5334 10632 8563 8563 1 9606 Homo sapiens 0.043270220860904374 EAVVQEPER Unmodified 1055.5247 0.52473799 2338 B7Z6D5;B3GQE6;Q96GQ7;Q53G15 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 0 0 1 0 1 35.347 35.347 2 0.00083667 8106 20230619_1880_Aki_TMTPro18x_K_F1 121.64 55.759 69343 43700 63259 70521 106260 114810 86515 89744 131630 80755 97812 100160 100210 87196 89879 62421 122600 100760 63981 40263 65459 69523 106520 112120 89711 93134 130040 82823 102050 100290 101770 89106 93209 65376 116830 95376 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129640000 5633 2338 5335 10633 8564 8564 1 9606 Homo sapiens -0.0008033928738768736 EAVVWEAASMSQK Unmodified 1434.6813 0.68131498 2472 B4DF80;Q9H6R4-4;Q9H6R4;A0A0A0MRW6;Q9H6R4-2;B3KPN5;Q9H6R4-3 NOL6 Nucleolar protein 6 yes no 0 0 0 6 0 1 58.043 58.111 3 9.3627E-05 17322 20230619_1886_Aki_TMTPro18x_K_F6 102.73 82.892 40998 33780 38500 38934 33928 47237 39024 35960 53023 49003 47138 45863 49958 40348 41726 54727 46169 44637 37893 30971 39261 39006 35850 46862 39483 37872 52989 48757 48743 46524 50497 42559 42893 54164 44120 42509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33912000 5634 2472 5336 10634 8565 8565 1 9606 Homo sapiens -0.018638421792502413 EAWPHIK Unmodified 879.46029 0.46028724 3630 P52209-2;P52209;B4E2U0;B4DL86;K7EM49;K7EMN2;K7EPF6 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 7 0 1 44.933 45.019 3 0.0030237 11322 20230619_1887_Aki_TMTPro18x_K_F7 105.95 71.869 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5635 3630 5337 10635 8566 8566 1 9606 Homo sapiens 0.01573550417140268 EAYEAGLIGK Unmodified 1049.5393 0.53932542 2460 Q96ID4;B4DE93;G3V0I5;E5KNH5;P49821-2;P49821;E9PJL9;H0YE81;E9PLC6;E9PQP1;E9PMX3 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 4.5 0.5 1 1 51.205 51.232 2;3 0.0013033 14557 20230619_1883_Aki_TMTPro18x_K_F4 109.29 67.181 68387 58848 67458 74574 87058 98411 85891 81465 108550 74100 88350 79040 90068 71560 79618 91013 92274 86769 63249 53997 68951 74306 88898 97299 87328 84204 108370 75526 91598 79848 91359 75106 81904 90878 88127 82479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33469000 5636 2460 5338 10636;10637 8567;8568 8567 2 9606 Homo sapiens 0.01653732860791024 EAYGAVTQTVR Unmodified 1193.6041 0.60405094 3920 Q6FGV9;Q15126 PMVK Phosphomevalonate kinase yes no 0 0 0 5.5 0.5 1 1 40.795 40.887 2 3.3518E-11 9876 20230619_1885_Aki_TMTPro18x_K_F5 184.71 146.89 201730 147320 149970 194030 212610 237120 208670 197800 250210 211320 241560 237140 216920 186390 218370 237320 258860 233290 186010 135320 157870 192550 215990 235570 211810 205190 252060 213720 247150 237910 222310 196590 224360 237400 247110 221710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159850000 5637 3920 5339 10638;10639 8569;8570;8571 8569 3 9606 Homo sapiens 0.014993076667451533 EAYMGNVLQGGEGQAPTR Oxidation (M) 1892.8687 0.86867484 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHH9;H0YEL7;P24752-2;A0A5F9ZHL7;E9PRQ6 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 1 0 4 0.707 1 2 1 43.049 43.1 2;3 1.5902E-14 10953 20230619_1882_Aki_TMTPro18x_K_F3 166.37 155.59 57727 51893 48747 54195 63432 58219 66001 61722 75310 69504 87045 82260 90225 73874 75336 80418 93024 101430 53343 47521 50511 54624 64727 58705 66670 63035 76629 70225 88847 82677 91262 76870 77873 81866 88892 96088 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 352860000 5638 1208 5340 10640;10641;10642;10643 8572;8573;8574;8575 8572 744 4 9606 Homo sapiens -0.042044754324706446 EAYMGNVLQGGEGQAPTR Unmodified 1876.8738 0.87376021 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHH9;H0YEL7;P24752-2;A0A5F9ZHL7;E9PRQ6 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 4.5 0.5 1 1 49.531 49.587 3 1.9703E-48 13560 20230619_1885_Aki_TMTPro18x_K_F5 210.57 204.54 127510 109110 118440 128250 130190 158470 143150 144240 177900 138810 139990 133890 165010 139510 150210 168120 169360 166040 117870 100040 121330 128350 134840 157600 144630 148170 177670 140540 146470 136440 166950 145260 154150 168320 161840 157740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 568880000 5639 1208 5340 10644;10645 8576;8577 8577 2 9606 Homo sapiens -0.029601715698390763 EAYPDHTQFEK Unmodified 1363.6044 0.60444487 253 A0A024R3M1;Q9P016;Q9P016-2 THYN1 Thymocyte nuclear protein 1 yes no 0 0 0 3.5 0.5 1 1 41.344 41.395 3 3.0466E-07 10150 20230619_1883_Aki_TMTPro18x_K_F4 167.6 155.73 165560 127670 153350 165950 220760 219940 214330 208400 281330 192420 248640 240060 236600 201670 214970 228000 258040 252670 152940 117220 157880 165130 223740 218070 218430 213260 281140 196960 256020 240360 240890 210690 221420 230060 246440 239750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 282670000 5640 253 5341 10646;10647 8578;8579 8579 2 9606 Homo sapiens -0.06281317404045694 EAYPEEAYIADLDAK Unmodified 1696.7832 0.7831971 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 2.4 1.02 1 2 1 1 61.127 61.138 2;3 1.477E-13 19095 20230619_1881_Aki_TMTPro18x_K_F2 208.27 169.48 149570 141090 143160 145590 120300 155480 148400 159870 166090 171760 166390 177950 189590 156480 195100 217800 190020 198350 138390 129170 145660 146890 127720 156580 148630 163300 168280 173100 171860 179700 192990 165350 198150 216730 181920 188570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2262300000 5641 161 5342 10648;10649;10650;10651;10652 8580;8581;8582 8581 3 9606 Homo sapiens -0.03732317346475611 EAYPGDVFYLHSR Unmodified 1552.731 0.73104237 3504 V9HW26;P25705;P25705-2;P25705-3 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 6.17 1.07 2 2 1 1 50.149 50.226 3 9.8744E-22 13942 20230619_1886_Aki_TMTPro18x_K_F6 192.4 156.08 509580 381810 397010 515540 518240 564440 563640 555680 748930 602220 586310 587190 547210 573780 579850 723940 561860 700270 470080 350760 415250 510040 530450 566770 571030 569530 745610 606100 607580 596590 562100 599760 588960 723320 538720 664860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2045699999.9999998 5642 3504 5343 10653;10654;10655;10656;10657;10658 8583;8584;8585 8584 3 9606 Homo sapiens -0.02321391178884369 EAYTAVVYHNR Unmodified 1321.6415 0.64149908 4383 Q96N67;Q96N67-6;Q96N67-2;Q96N67-5;Q96N67-3;Q96N67-4;A0A2X0SSK2 DOCK7 Dedicator of cytokinesis protein 7 yes no 0 0 0 6.5 0.5 1 1 38.748 38.821 3 8.2609E-13 9043 20230619_1886_Aki_TMTPro18x_K_F6 179.57 155.83 39890 22370 40409 39462 44707 44590 42171 43289 67965 41439 44728 67357 69346 62213 38261 70668 92516 103870 36816 20648 41056 38495 46041 44655 43451 44277 66795 42834 48170 66999 68620 64816 42623 72617 88073 98264 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86306000 5643 4383 5344 10659;10660 8586 8586 1 9606 Homo sapiens -0.006456010676174628 EAYVNANQAR Unmodified 1134.5418 0.54178503 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 0 4 0 1 34.363 34.413 2 1.5966E-06 7299 20230619_1883_Aki_TMTPro18x_K_F4 170.95 150.64 57753 28755 65076 65538 79361 92161 61898 77666 78716 68417 98274 102760 89529 77239 77215 45761 103230 91569 53328 26670 65708 63434 80883 90747 64024 80053 79959 70690 99530 101810 91075 78893 79981 49174 98437 86530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120830000 5644 1140 5345 10661 8587 8587 1 9606 Homo sapiens -0.020104186815842695 EAYYWLR Unmodified 999.48142 0.48141661 247 A0A024R3J7;P46977;P46977-2 hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 0 0 7.5 0.5 1 1 53.901 53.97 2 0.0073036 15240 20230619_1888_Aki_TMTPro18x_K_F8 126.24 87.452 254380 239630 252920 277480 313770 397210 321640 351600 503960 197260 176430 156060 170730 152160 292130 198560 194820 176790 235430 219610 258200 278670 322060 391350 329200 358020 489060 207050 196260 160410 180340 159520 289030 197880 187220 168220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 347300000 5645 247 5346 10662;10663 8588 8588 1 9606 Homo sapiens -0.018344842740020795 ECACAGLAR Unmodified 1006.4324 0.43243428 4169 Q7Z4Q2;A0A8I5KQT3 HEATR3 HEAT repeat-containing protein 3 yes no 0 0 0 4 0 1 33.816 33.87 2 0.00036931 7091 20230619_1883_Aki_TMTPro18x_K_F4 138.26 122.82 30957 18107 31694 31379 34996 38592 30920 32635 37101 30819 31130 30439 34872 27486 21869 27319 44615 36523 28580 16705 32177 30672 35987 38319 31617 33697 37208 31250 32360 30812 34867 28470 23745 27954 42411 34622 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26247000 5646 4169 5347 10664 8589 8589 1 9606 Homo sapiens -0.07052463896911831 ECADLWPR Unmodified 1045.4651 0.46511462 153 Q9BTQ7;A0A024R1Q8;P62829;J3KTJ3 RPL23 60S ribosomal protein L23 yes no 0 0 0 3.5 0.5 1 1 48.401 48.46 2 0.022051 13181 20230619_1883_Aki_TMTPro18x_K_F4 87.181 59.656 345410 288320 314740 338810 376250 426300 380660 403240 543970 418440 374100 346940 401750 317460 355720 421740 424230 418940 319200 264380 323370 339200 386530 423900 388470 413730 537950 420210 392780 354590 406960 334160 366670 421760 405210 397960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 339980000 5647 153 5348 10665;10666 8590;8591 8591 2 9606 Homo sapiens -0.05579933502417589 ECCDKPLLEK Unmodified 1290.5948 0.59480816 2776 CON__P02769 yes yes 0 0 1 5 0.816 1 1 1 45.303 45.373 3 0.00074249 11877 20230619_1883_Aki_TMTPro18x_K_F4 99.5 74.063 + 310350 998050 1258100 391020 4444100 4592800 1849200 2024600 3438100 984710 1123900 1330000 513040 750520 921330 819020 1340100 1569900 299470 906850 1241500 500320 4293000 4267800 2061000 2212700 3315200 1068800 1236600 1314400 566530 796460 952340 863990 1279800 1482300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1633199999.9999998 5648 2776 5349 10667;10668;10669 8592;8593;8594 8592 3 9606 Homo sapiens -0.0388654500541179 ECCHGDLLECADDR Unmodified 1748.6553 0.65525294 2776 CON__P02769 yes yes 0 0 0 1.5 0.5 1 1 38.836 38.87 3 3.1221E-22 9577 20230619_1880_Aki_TMTPro18x_K_F1 228.03 223.32 + 32281 82492 115610 47115 330000 485700 209050 187210 351740 103800 108030 157010 64493 93791 90526 90030 156540 276190 30883 75083 113540 56124 323600 450650 221750 209270 339850 111800 120720 154640 68943 98749 95276 100850 149970 259920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 441520000 5649 2776 5350 10670;10671 8595 8595 1 9606 Homo sapiens -0.1891284747532609 ECCHGDLLECADDRADLAK Unmodified 2246.9355 0.93545055 2776 CON__P02769 yes yes 0 0 1 3 0.816 1 1 1 45.231 45.299 4 2.0158E-14 12248 20230619_1881_Aki_TMTPro18x_K_F2 160.3 141.42 + 486310 1123300 1293300 506780 3391200 3911200 2040500 1879900 2886500 910780 975850 1176000 625060 756870 911670 951360 1288200 2021000 460970 1021500 1274100 608220 3321000 3650300 2158600 2031600 2811800 986320 1077500 1167600 665950 805560 943280 1011900 1233900 1905500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2686300000 5650 2776 5351 10672;10673;10674 8596;8597;8598 8596 3 9606 Homo sapiens -0.13813975995208239 ECCVTAGGR Unmodified 1008.4117 0.41169884 3267 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 0 0 0 3 0 1 30.21 30.304 2 0.0023169 5722 20230619_1882_Aki_TMTPro18x_K_F3 107.57 92.799 9213.5 6615.9 13428 14392 16765 20116 12926 17346 17078 11285 15236 21724 18054 14622 16895 6716.1 18838 19677 8545.2 6119.6 13347 13952 17056 19821 13398 17740 17075 12051 15887 21299 18276 14915 17248 7636.7 18011 18549 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10332000 5651 3267 5352 10675 8599 8599 1 9606 Homo sapiens -0.0921705427656434 ECDYSIDGINR Unmodified 1340.5667 0.56667916 4740 Q9Y4G6;A0A1B0GVU7;G1UI21;H0YMT1;H0YN01 TLN2 Talin-2 yes no 0 0 0 2 0 1 45.471 45.553 2 0.0014466 12399 20230619_1881_Aki_TMTPro18x_K_F2 114.4 62.965 27413 20313 21343 27125 30917 33321 29292 27321 40609 28928 33096 40914 35687 28149 35732 36141 43352 37212 25287 18660 22365 26896 31342 33084 29956 28382 40395 29538 34480 40537 36342 29880 36752 36251 41362 35355 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50009000 5652 4740 5353 10676 8600 8600 1 9606 Homo sapiens -0.08998151661171505 ECEDTHLGEEVDR Unmodified 1587.6471 0.64711432 3269 O43847;O43847-2;B4DRI0;Q6UUU9;G3V1R5;H0Y5G9 NRD1 Nardilysin yes no 0 0 0 1 0 1 35.687 35.687 3 5.2996E-05 8270 20230619_1880_Aki_TMTPro18x_K_F1 111.38 98.243 27247 16269 25747 28748 28473 42507 30862 29010 50139 29650 33937 52999 49089 46222 34540 41142 53006 75730 25141 15012 26354 28150 29553 41576 31550 30602 49282 30706 36356 52450 48987 47656 36438 43331 50694 71479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93891000 5653 3269 5354 10677 8601 8601 1 9606 Homo sapiens -0.12320335128765691 ECEGIVPVPLAEK Unmodified 1439.733 0.7330162 3764 P82932 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 0 0 0 4.5 0.5 1 1 57.186 57.219 3 9.9937E-05 17166 20230619_1883_Aki_TMTPro18x_K_F4 101.39 83.656 80718 61448 72653 73408 76656 88345 79424 82773 90713 73325 62131 59623 79813 50660 69126 80589 74120 72491 74544 56375 74540 73362 79443 88065 80274 84668 90642 74221 65854 60891 80290 54220 70817 80007 70858 68944 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107860000 5654 3764 5355 10678;10679 8602 8602 1 9606 Homo sapiens 0.03073901514676436 ECELYVQK Unmodified 1067.4957 0.49574604 2223 P10644;B2R5T5;Q68DQ4;K7EM13;P10644-2;K7EPB2;K7EMZ6;K7EPR5;K7EJ40;K7EK41;A6YCE1;K7EIE5;K7EMU2;A6YCE2;K7EQK3;Q96P62;Q15300;X6RAV4 PRKAR1A;DKFZp779L0468;PRKAR1A/RARA fusion;RET/PTC2 cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 0 0 0 4.33 0.471 2 1 46.545 46.6 2;3 0.0027356 12452 20230619_1883_Aki_TMTPro18x_K_F4 121.99 78.285 109840 85287 101460 114430 112380 125500 140880 144440 176170 145850 159800 175210 172450 146910 135900 161510 185350 179950 101470 78333 104040 113310 116700 126470 141440 146270 176700 148250 165340 175530 173920 153260 141700 163030 176820 170740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147700000 5655 2223 5356 10680;10681;10682 8603;8604 8604 2 9606 Homo sapiens -0.03530199908027498 ECENCDCLQGFQLTHSLGGGTGSGMGTLLISK Oxidation (M) 3442.5262 0.52615961 983 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;G3V2A3 TUBB3 Tubulin beta-3 chain yes no 0 1 0 7 0 1 60.211 60.257 4 4.4629E-81 17896 20230619_1887_Aki_TMTPro18x_K_F7 286.31 281.1 53667 49922 54496 57057 47168 42611 47212 44864 38550 58505 54315 54452 47088 46550 41623 55723 55976 65395 49673 45747 55172 56868 49469 44290 47385 46080 40486 58221 54670 55174 48080 48758 43297 56343 53484 61975 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135960000 5656 983 5357 10683 8605;8606 8605 550 2 9606 Homo sapiens -0.09740242432053492 ECEPPSAGAAVTAR Unmodified 1414.6511 0.65107749 4483 Q9C0E8-2;Q9C0E8;Q9C0E8-4;B7Z829;B7ZLA9;Q9C0E8-3 LNP;KIAA1715 Protein lunapark yes no 0 0 0 3 0 1 36.996 37.05 2 0.012239 8369 20230619_1882_Aki_TMTPro18x_K_F3 71.085 44.482 15904 11916 12233 16510 15427 17133 15896 15931 21792 18030 21910 24396 24116 21177 18963 23325 26552 26980 14670 10950 12806 16293 15805 17247 16179 16421 21857 18314 22580 24366 24310 22062 19815 23596 25334 25585 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18085000 5657 4483 5358 10684 8607 8607 1 9606 Homo sapiens -0.039662008444338426 ECEPPSAGAAVTARPGQEIR Unmodified 2095.0117 0.011650679 4483 Q9C0E8-2;Q9C0E8;Q9C0E8-4;B7Z829;B7ZLA9;Q9C0E8-3 LNP;KIAA1715 Protein lunapark yes no 0 0 1 3.5 0.5 1 1 38.854 38.903 3 2.8127E-24 9078 20230619_1883_Aki_TMTPro18x_K_F4 194.14 159.45 51209 50609 47125 54026 46728 44963 48020 49425 46633 51183 53414 50453 55659 46172 59114 56546 58784 60490 47382 46340 48232 54185 48548 46303 48331 50249 47888 51590 54585 51130 56887 48335 60017 56886 56259 57405 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 163500000 5658 4483 5359 10685;10686 8608;8609 8609 2 9606 Homo sapiens 0.007945319587634003 ECFLIQPK Unmodified 1033.5267 0.52665224 2737 C9J384;D3DN44;Q9BQ75-2;Q9BQ75 CMSS1;hCG_2023567 Protein CMSS1 yes no 0 0 0 7 0 1 53.75 53.817 3 0.008781 15275 20230619_1887_Aki_TMTPro18x_K_F7 71.501 45.563 68344 53680 63264 64821 66615 71651 73772 70524 80182 70038 65733 57750 70718 55065 63504 78809 73920 76924 63141 49247 64748 64651 69116 71919 74156 72113 80742 70457 68290 59155 71660 58184 65363 78654 70646 73072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63145000 5659 2737 5360 10687 8610 8610 1 9606 Homo sapiens 0.011229981968654101 ECFTYVLK Unmodified 1058.5107 0.51066783 4578 Q9NQW7-4;Q9NQW7-3;Q5T6H7;B3KSI7;Q9NQW7-2;Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 8 0 1 56.041 56.103 2 0.001197 16192 20230619_1888_Aki_TMTPro18x_K_F8 159.04 101.76 186060 146540 177490 172090 153160 175440 204380 185400 235890 212020 188730 172610 198640 159120 194420 224650 197770 199620 171940 134400 180650 171830 162470 177400 204020 189460 236630 211700 196210 176660 202180 168100 198130 223200 189210 189860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84453000 5660 4578 5361 10688 8611 8611 1 9606 Homo sapiens -0.016247080400262348 ECFVCTACR Unmodified 1201.4678 0.46783351 3098 Q53T40;I0CE67;Q6I9R8;Q2TSB7;Q2XQU9;Q14192 FHL2;AAG11 Four and a half LIM domains protein 2 yes no 0 0 0 6 0 1 40.932 41.026 2 9.9332E-16 9955 20230619_1886_Aki_TMTPro18x_K_F6 182.53 172.62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5661 3098 5362 10689 8612 8612 1 9606 Homo sapiens -0.1248416943144548 ECGHDVTCPVAK Unmodified 1371.5911 0.59111977 1724 A0A804HK74;F2Z2B9;B3KRS1;A0A804HI27;A0A804HL95;A0A804HJQ4;A0A804HJS9;Q53EQ3;A0A804HJ08;A0A804HJH7;Q9BSJ2;Q9BSJ2-4;B4DS45;Q9BSJ2-3;B3KTU7 TUBGCP2 Gamma-tubulin complex component 2 yes no 0 0 0 4 0 1 36.504 36.55 3 1.77E-05 8141 20230619_1883_Aki_TMTPro18x_K_F4 126.76 112.41 47234 27811 44406 44481 48296 51062 46782 52937 58952 53809 48618 50148 62280 43863 43748 50007 75895 60685 43578 25629 45397 43625 49826 51158 47652 53945 58984 54226 50956 50844 62229 45848 46607 50730 72200 57582 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47216000 5662 1724 5363 10690 8613 8613 1 9606 Homo sapiens -0.07981214779283619 ECGQLLISENQK Unmodified 1417.6871 0.68712864 1028 A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0;Q5JRC6;Q8IWS0-4;Q8IWS0-2;A0A8I5QJH7;A0A8I5KVG8;A0A8I5KWC2 PHF6 PHD finger protein 6 yes no 0 0 0 4 0 1 48.615 48.653 2 0.015948 13350 20230619_1883_Aki_TMTPro18x_K_F4 84.17 65.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5663 1028 5364 10691 8614 8614 1 9606 Homo sapiens -0.005007436675441568 ECGVENIR Unmodified 975.44438 0.44437918 1559 K7EJX5;B4DSA4;A0A499FJN5;Q7KZA3;Q53FU1;Q5TZY0;P22830;P22830-2 FECH;DKFZp686P18130 Ferrochelatase;Ferrochelatase, mitochondrial yes no 0 0 0 2 0 1 35.533 35.59 2 0.0020362 7916 20230619_1881_Aki_TMTPro18x_K_F2 133.12 101.83 30995 21852 32867 28286 46132 48201 38343 45575 47846 34797 58963 59515 43988 48731 45315 35780 71482 68885 28650 20070 33400 28307 46647 47162 39431 46417 48560 36513 59316 58925 45534 49921 47442 38048 68122 65086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37333000 5664 1559 5365 10692 8615 8615 1 9606 Homo sapiens -0.044325238820761115 ECGVTATFDASR Unmodified 1312.5718 0.57176453 383 P49757-2;A0A024R6C4;B2RCI6;A0A024R681;P49757-4;A0A024R684;A0A024R6F4;P49757-3;P49757;G3V3Z8;G3V3R1;Q86SW6;G3V3M5;Q86SW5;P49757-7;P49757-6;P49757-8;P49757-5 NUMB Protein numb homolog yes no 0 0 0 3 0 1 43.21 43.275 2 7.5494E-05 11055 20230619_1882_Aki_TMTPro18x_K_F3 122.74 97.523 51364 35246 50992 53393 52278 61998 49601 59559 68686 80491 87738 95017 111000 85677 65888 74282 118760 108540 47444 32435 51862 52522 54199 61952 50813 61540 69727 80651 90121 95403 110380 88178 70740 76727 113050 102770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30114000 5665 383 5366 10693 8616 8616 1 9606 Homo sapiens -0.07201847798546623 ECHLNADTVSSK Unmodified 1359.6089 0.60887832 1172 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087X253;B4DWG4;B4E261;Q96EL6;B4DIL5 AP2B1;DKFZp781K0743 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 4 0 1 36.972 37.016 3 3.8421E-05 8368 20230619_1883_Aki_TMTPro18x_K_F4 119.25 104.05 58997 31939 51845 57504 63193 59603 61147 63537 76792 66834 82440 64586 77419 67350 52549 67955 85418 80251 54383 29494 53452 55962 64647 60188 62264 64716 77521 67329 83927 65833 78027 69439 55768 68923 81374 76111 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206050000 5666 1172 5367 10694 8617 8617 1 9606 Homo sapiens -0.05654176252801335 ECLAETER Unmodified 1006.439 0.43895945 3217 Q6IAV4;O14519-2;O14519;O75956 DOC-1R;CDK2AP1;CDK2AP2 Cyclin-dependent kinase 2-associated protein;Cyclin-dependent kinase 2-associated protein 1;Cyclin-dependent kinase 2-associated protein 2 yes no 0 0 0 1 0 1 34.536 34.536 2 0.0038014 7770 20230619_1880_Aki_TMTPro18x_K_F1 118.32 61.946 39123 21780 44642 40873 55803 67214 53142 57172 72602 43160 58257 56459 59089 48534 44721 33029 63614 57502 36146 20122 45047 40023 57071 65676 54331 58693 72175 44840 60444 56426 59604 49547 46697 34856 60640 54379 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136450000 5667 3217 5368 10695 8618 8618 1 9606 Homo sapiens -0.06400247464534914 ECLPLIIFLR Unmodified 1272.7264 0.72641468 2202 Q96IR1;B2R491;P62701;Q53HV1;B7Z1M6 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform yes no 0 0 0 3.5 0.5 1 1 65.173 65.195 2 8.0344E-06 20476 20230619_1883_Aki_TMTPro18x_K_F4 166.68 145.71 308940 247760 309700 309640 289950 362440 338010 326390 470690 390520 285040 282070 395530 324160 268220 422280 366940 428200 285640 227360 314300 308320 304580 361560 341990 337580 464710 388290 305850 292780 394240 338410 281300 422590 350560 406420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 244860000 5668 2202 5369 10696;10697 8619;8620;8621 8621 3 9606 Homo sapiens 0.10096053144616235 ECLQALEFLHANQVIHR Unmodified 2077.0527 0.052727633 3839 Q13177;A8K5M4;H7C1X3 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase yes no 0 0 0 8 0 1 55.213 55.28 4 0.00015593 15834 20230619_1888_Aki_TMTPro18x_K_F8 90.754 68.101 55717 46033 54585 51944 58971 46933 61237 45458 40630 42045 45331 31252 50468 30534 45265 35813 29908 28238 51514 42197 55571 51935 60762 47876 60967 46514 42772 42340 46438 32240 50980 31857 45219 35519 28753 26907 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1109900000 5669 3839 5370 10698 8622 8622 1 9606 Homo sapiens 0.057283377889234544 ECLQHPGGATPVCVYTR Unmodified 1943.8982 0.89820083 4476 Q9BZE9;Q9BZE9-2;Q9BZE9-3;J3QL04;J3QR12;Q9BZE9-4;J3QRW3;J3KRG1 ASPSCR1 Tether containing UBX domain for GLUT4 yes no 0 0 0 7.5 0.5 1 1 41.682 41.716 3 1.9634E-18 9949 20230619_1887_Aki_TMTPro18x_K_F7 178.57 146.21 54466 40637 43648 54345 40545 48270 49410 58891 56209 55417 58687 61785 62250 55602 54864 61267 68458 69839 50253 37328 45260 53670 42660 49496 49549 59322 56976 56366 60270 62225 63099 57859 56704 61940 65378 66237 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168160000 5670 4476 5371 10699;10700 8623;8624 8623 2 9606 Homo sapiens -0.035992346879766046 ECLSLDPEER Unmodified 1246.55 0.54996646 2439 Q8NI08;Q8NI08-2;B3KXK4;H0UI55;Q8N3C8;Q8NI08-7;Q8N4U9;Q3LID7;Q6PK00 NCOA7;DKFZp761B2210;Nbla00052 Nuclear receptor coactivator 7 yes no 0 0 0 1 0 1 46.4 46.4 2 2.5942E-05 12869 20230619_1880_Aki_TMTPro18x_K_F1 132.01 113.7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5671 2439 5372 10701 8625 8625 1 9606 Homo sapiens -0.0634465254713632 ECMAGTSGSEEVK Unmodified 1383.5646 0.56463025 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7;B3KWP6;B7Z6P3;G3V5P0 KTN1 Kinectin yes no 0 0 0 2 0 1 40.321 40.395 3 0.0044885 9986 20230619_1881_Aki_TMTPro18x_K_F2 76.868 61.895 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5672 380 5373 10702 8626 8626 1 9606 Homo sapiens -0.11180948461287699 ECMSHYLR Unmodified 1094.4637 0.46373441 2625 B4DYP7;Q96CW5-2;Q96CW5 TUBGCP3 Gamma-tubulin complex component 3 yes no 0 0 0 6.5 0.5 1 1 37.43 37.501 3 6.834E-05 8266 20230619_1887_Aki_TMTPro18x_K_F7 151.04 134.26 32822 24425 33651 34665 31365 39102 34079 40764 63872 32932 28804 29624 29045 22754 30219 27818 34999 29907 30338 22452 34090 34221 32928 39215 35115 41296 61889 33661 31213 29982 29704 23984 30955 27999 33405 28402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28068000 5673 2625 5374 10703;10704 8627 8627 1 9606 Homo sapiens -0.07971890862836517 ECNPPNSQPASYQR Unmodified 1646.7107 0.71071763 1663 A0A7I2V4F2;A0A7I2V629;Q2NKQ6;E9PG73;A0A7I2V5Q5;Q13427;Q32LZ0;C9JM79;Q13427-2 PPIG Peptidyl-prolyl cis-trans isomerase G yes no 0 0 0 4 0 1 33.471 33.524 3 4.1353E-07 6908 20230619_1883_Aki_TMTPro18x_K_F4 137.4 126.13 10785 8841.9 13452 10669 11646 12823 12465 12645 16016 11946 11027 8320.4 14660 9913.6 8702.6 11610 15727 11390 9993.5 8110.4 13398 10661 12260 12800 12634 12907 15911 12012 11682 8677.5 14556 10280 9354.9 11619 14950 10837 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22828000 5674 1663 5375 10705 8628 8628 1 9606 Homo sapiens -0.08676929901048425 ECPAIDYTR Unmodified 1123.4968 0.49680868 4826 S4R3N1;B4DM50;A8K012;A0A024R3X9;Q9Y3A3-2;Q9Y3A3-3;Q9Y3A3 HSPE1-MOB4;MOB4;PREI3 MOB-like protein phocein yes no 0 0 0 3 0 1 41.143 41.202 2 1.0327E-05 10100 20230619_1882_Aki_TMTPro18x_K_F3 172.94 125.09 134370 110140 124800 127670 123210 133450 134920 132250 173220 168330 177190 163480 185770 150960 138290 195670 200890 181820 124180 100990 127560 127610 128480 134530 136560 136160 174460 168070 181820 165850 187080 158520 145230 194970 191470 172910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109280000 5675 4826 5376 10706 8629 8629 1 9606 Homo sapiens -0.05999985539142472 ECPFVIKPK Unmodified 1116.6002 0.60015154 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H962;B4DGF6;A0A994J6V7;A0A087X1S3;Q5H964 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 1 2 0 1 49.085 49.15 3 0.0026724 14074 20230619_1881_Aki_TMTPro18x_K_F2 90.629 64.031 160780 138740 172080 169160 157350 163250 164500 171720 193620 187450 183320 183980 169160 140850 173230 166630 174810 143560 148800 127250 173600 168310 164720 165780 166440 175270 195210 188460 187970 185390 173260 148060 176120 165810 167030 136720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147300000 5676 594 5377 10707 8630 8630 1 9606 Homo sapiens 0.04651546639342996 ECPPHAEQR Unmodified 1122.4876 0.48764097 282 A0A024R471;Q9H9Q2;Q53GQ2;J3KQ34;A0A087X1P5;Q9H9Q2-2;B3KW51;J3QT73;B3KV02;A0A024R478 COPS7B COP9 signalosome complex subunit 7b yes no 0 0 0 1 0 1 23.091 23.091 3 0.036093 3771 20230619_1880_Aki_TMTPro18x_K_F1 59.645 35.81 57817 36837 62662 56393 89139 78829 68717 91238 76383 65503 74673 83212 67975 57843 75517 48210 90826 73947 53425 33915 63581 55651 89783 78302 70774 91562 77307 68074 76483 82740 69963 60022 77338 50139 86637 70024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70437000 5677 282 5378 10708 8631 8631 1 9606 Homo sapiens -0.06870334104792164 ECPSDECGAGVFMASHFDR Unmodified 2170.8507 0.85065829 1332 Q5RKT7;A0A248RGE3;P62979;B2RDW1;Q8WYN9 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a yes no 0 0 0 3.5 1.71 1 1 1 1 1 1 50.242 50.294 3 6.0184E-61 14090 20230619_1883_Aki_TMTPro18x_K_F4 309.33 305.61 443850 346030 393220 399320 329750 402220 415180 394490 437160 492110 305400 352060 572400 397500 304460 617570 566070 599060 409910 317320 402770 399070 350230 406350 414350 406170 439790 487860 331320 365420 562770 420770 330460 614930 539320 569060 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 2926599999.9999995 5678 1332 5379 10709;10710;10711;10712;10713;10714 8632;8633;8634;8635;8636;8637;8638 8637 7 9606 Homo sapiens -0.1879330174115239 ECPSDECGAGVFMASHFDR Oxidation (M) 2186.8456 0.84557291 1332 Q5RKT7;A0A248RGE3;P62979;B2RDW1;Q8WYN9 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a yes no 0 1 0 2.5 1.12 1 1 1 1 45.344 45.394 3 1.074E-14 12288 20230619_1881_Aki_TMTPro18x_K_F2 153.68 145.29 263710 210510 240650 266180 288940 290820 280220 245200 319590 295960 211950 238650 333690 238830 216540 381850 366470 374620 243630 193200 247220 264500 295940 291260 284110 255120 319420 294800 227950 244980 331080 254210 231430 380430 349240 355860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 741070000 5679 1332 5379 10715;10716;10717;10718 8639;8640;8641 8639 843 3 9606 Homo sapiens -0.20037605603738484 ECPSVLEYK Unmodified 1123.522 0.52196079 183 A0A024R222;B4DHQ3;Q9Y617;A0A024R280;Q9Y617-2;B4DHX7 PSAT1 Phosphoserine aminotransferase yes no 0 0 0 4.33 0.471 2 1 49.956 50.004 2;3 0.00015803 13736 20230619_1885_Aki_TMTPro18x_K_F5 131.5 102.42 302840 262350 291780 225620 214120 251450 210490 208340 242750 328270 372180 492400 367830 326870 427450 422970 441320 533390 280050 239920 295670 231600 228670 251570 213820 219140 250940 330090 376550 486370 378450 347680 434380 429650 422760 505110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 366420000 5680 183 5380 10719;10720;10721 8642;8643 8643 2 9606 Homo sapiens -0.03485930736565024 ECQEESFWK Unmodified 1241.5023 0.50228798 4015 Q56VL3;D6RD77;J3KPI9;Q56VL3-2 OCIAD2 OCIA domain-containing protein 2 yes no 0 0 0 3 0 1 51.455 51.52 2 0.0027694 14839 20230619_1882_Aki_TMTPro18x_K_F3 112.75 92.962 43153 43720 48488 30122 45160 58372 53303 47218 66718 58498 43521 39748 61491 46231 40235 60763 48910 46697 40003 39905 48668 31997 47460 56656 53663 49272 66314 57996 46483 41441 61153 48271 41878 59982 46698 44510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29151000 5681 4015 5381 10722 8644 8644 1 9606 Homo sapiens -0.1088030674732181 ECREEILK Unmodified 1075.5332 0.53319418 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 2.5 0.5 1 1 38.244 38.302 3 0.0009774 8886 20230619_1882_Aki_TMTPro18x_K_F3 124.92 101.32 230500 152000 199620 210420 247310 278070 241850 268560 333430 353100 246940 273460 463720 315440 165880 550960 515850 442900 212650 139760 206140 208550 253240 275760 246960 277020 331680 349990 266690 283030 452180 336760 195310 542540 489670 422080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 349580000 5682 3758 5382 10723;10724 8645 8645 1 9606 Homo sapiens -0.001551086423887682 ECREPELGLEELLR Unmodified 1741.8669 0.86688392 4634 Q9NZL4;Q9NZL4-3;Q9NZL4-2 HSPBP1 Hsp70-binding protein 1 yes no 0 0 1 3 0 1 57.189 57.221 3 1.6118E-08 17305 20230619_1882_Aki_TMTPro18x_K_F3 141.85 123.74 74921 56788 75415 70591 66771 74073 76577 75325 77149 87299 93512 82713 98899 76511 94370 98607 91630 93678 69249 52121 76407 70228 70288 74672 76706 77185 79260 87422 95350 84030 100480 80333 95915 98450 87711 89021 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155250000 5683 4634 5383 10725 8646;8647 8647 2 9606 Homo sapiens 0.025625155496072693 ECSIYLIGGSIPEEDAGK Unmodified 1936.9088 0.90880832 4576 V9HW91;Q9NQR4;H7C579;B4DFB1;B7Z3F9 HEL-S-8a;NIT2 Omega-amidase NIT2 yes no 0 0 0 3.5 0.5 1 1 60.977 60.993 3 7.0844E-08 18726 20230619_1883_Aki_TMTPro18x_K_F4 120.63 109.01 71806 57858 67285 75422 75563 85189 58368 59465 91411 64266 62159 67552 70819 63846 69563 80136 77356 65998 66356 53117 68880 74811 77473 84808 60880 62683 90052 64891 65569 68314 71997 66799 71242 79455 73860 62877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 544340000 5684 4576 5384 10726;10727 8648 8648 1 9606 Homo sapiens -0.022169735525267242 ECSLQVPEDELVSTLK Unmodified 1845.903 0.90299466 3434 Q5HY81;P11441;F8WB70;B4DDK5 UBL4A Ubiquitin-like protein 4A yes no 0 0 0 4 0 1 61.917 61.922 3 0.048543 19140 20230619_1883_Aki_TMTPro18x_K_F4 43.791 31.024 16931 23920 22014 34815 20227 23866 26760 25608 24507 17103 21587 34038 34653 20806 24250 26799 24323 20293 15765 21951 21996 34089 21311 24991 26532 25859 24957 18251 22940 33311 34396 22223 24857 26470 23244 19358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 345300000 5685 3434 5385 10728 8649 8649 1 9606 Homo sapiens 0.013879279357752239 ECSPWMSDFK Oxidation (M) 1301.5057 0.5056588 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 5 0 1 52.585 52.658 2 0.038814 14895 20230619_1885_Aki_TMTPro18x_K_F5 84.615 71.988 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5686 3758 5386 10729 8650 8650 2435 1 9606 Homo sapiens -0.13303379964986561 ECSPWMSDFK Unmodified 1285.5107 0.51074418 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 6 0.816 1 1 1 57.649 57.709 3 0.0045073 17126 20230619_1886_Aki_TMTPro18x_K_F6 72.096 59.115 54972 47114 58619 61483 51913 69060 62858 67378 82001 66517 58678 64801 80562 58270 58067 80273 77998 77673 50874 43243 59177 61006 54859 69179 63341 68910 81516 67250 62279 65652 80422 61535 60662 80095 74433 73803 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 242910000 5687 3758 5386 10730;10731;10732 8651 8651 1 9606 Homo sapiens -0.12059076102354993 ECTLLPETAHPDAAFQLTHAAQQLK Unmodified 2789.3807 0.38066329 2505 H3BRY6;B4DWZ3;B4DVT3;B4DJL6;Q96SY0-4;Q96SY0-3;Q96SY0 VWA9 von Willebrand factor A domain-containing protein 9 yes no 0 0 0 7 0 1 57.498 57.554 4 3.8740999999999996E-44 16814 20230619_1887_Aki_TMTPro18x_K_F7 218.69 205.65 44594 39851 43277 43449 45997 47434 47782 50130 54188 51392 51539 49933 54549 44782 47130 58012 56535 60520 41249 36508 44109 43662 47591 47749 48285 51047 54744 51826 53121 50605 55225 47081 48636 58188 54029 57441 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16359000 5688 2505 5387 10733 8652 8652 1 9606 Homo sapiens 0.057548186786334554 ECVGPPDPDLEPGETS Unmodified 1697.709 0.70904588 835 Q4V328-4;A0A994J436;A0A994J4V9;A0A994J6P1;A0A087WXA6;A0A994J489;A0A994J4J8;A0A994J472;A0A994J4U4;A0A994J4F7;A0A994J6V9;A8K7Z3;A0A994J7B3;A0A994J484;A0A994J6U6;A0A994J720;A0A994J4V2;A0A994J488;A0A994J783;Q4V328;A0A087WW92;A0A994J745;A0A994J4N3;A0A994J4H0;A0A994J6Q0;A0A994J4B5;A0A994J4E1;A0A087WT45;A0A994J7A3;A0A994J6M6;A0A994J3X9;A0A994J772;A0A994J467;A0A994J4D1;A0A994J447 GRIPAP1 GRIP1-associated protein 1 yes no 0 0 0 1 0 1 53.518 53.518 2 0.0086242 15847 20230619_1880_Aki_TMTPro18x_K_F1 70.977 56.819 7322 7609.2 5654.4 7469.6 6708.9 6509.9 6217.2 5870.1 10024 10043 8333.3 7713.7 12440 8519.1 9553.5 10628 8208.5 9236.8 6769.1 6961.4 5907.3 7544.2 6877.1 6650.5 6412.2 6155.1 9939.8 9861.3 8802.1 7964.9 12412 8883.1 9697.2 10566 7874 8784.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18088000 5689 835 5388 10734 8653 8653 1 9606 Homo sapiens -0.11190028500323024 ECVPNSNER Unmodified 1103.4666 0.46657118 2791 CON__Q0IIK2;CON__Q29443 yes no 0 0 0 1 0 1 30.292 30.292 2 0.015397 6091 20230619_1880_Aki_TMTPro18x_K_F1 75.378 59.224 + 7345.8 2889.5 9414.1 6643.1 18344 24307 8691.7 7953.8 13250 4834.4 7857.7 13559 8839.5 8247.4 7770.5 3830.5 11477 14132 6786.3 2684.8 9510.2 6610.8 18128 22841 9460.6 9167.9 13008 5349.5 8395.8 13160 8951 8455 8102.3 4508.9 10964 13303 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3341500 5690 2791 5389 10735 8654 8654 1 -0.08102344204326073 ECVQQLAENTR Unmodified 1346.6249 0.62486274 396 A0A024R6H1;O15270 SPTLC2 Serine palmitoyltransferase 2 yes no 0 0 0 4 0 1 42.119 42.162 2 0.00017614 10477 20230619_1883_Aki_TMTPro18x_K_F4 120.77 98.684 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5691 396 5390 10736 8655 8655 1 9606 Homo sapiens -0.034584700159030035 EDAAGTSGLGELNSR Unmodified 1475.6852 0.68521439 4060 Q5T3I0;Q5T3I0-3;A0A0A0MRK1;E9PAV9;A8KAG1;F8W895 GPATCH4 G patch domain-containing protein 4 yes no 0 0 0 2 0 1 43.152 43.233 2 1.7872E-42 11331 20230619_1881_Aki_TMTPro18x_K_F2 289.45 245.64 37806 31399 34326 37520 34917 39234 39345 34535 45438 42175 44043 36747 50261 37218 37342 52606 43269 41230 34934 28797 35189 37410 36360 39442 39594 35828 45888 42071 45461 37620 50450 39204 38611 51935 41328 39289 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41390000 5692 4060 5391 10737 8656 8656 1 9606 Homo sapiens -0.03360081151799932 EDAANNYAR Unmodified 1022.4417 0.44173664 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;F8VQQ4;F8VVB9;F8VRZ4;F8VS66;F8VWV9;F8VX09;A6NHL2-2;A6NHL2;Q6QMJ5;C9K0S6;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;P0DPH7-2;C9J2C0;Q9NY65-2;Q9NY65;Q7Z3M3;A0A7P0T945;Q8N532;A0A7P0TA31 TUBA1B;TUBA1A;TUBA1C;TUBAL3;TUBA1;TUBA8;TUBA4A;TUBA2;DKFZp686L04275 Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain no no 0 0 0 2 0.816 1 1 1 31.465 31.514 2 9.1227E-06 6575 20230619_1880_Aki_TMTPro18x_K_F1 175.44 137.29 207590 74137 267110 273170 361870 414520 257710 361880 274640 208230 423720 554130 319720 406410 399720 108270 536850 477940 191730 69706 267820 260900 365560 406660 266900 369020 284230 229140 424200 540940 334380 408000 410910 135330 511920 450250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3541899999.9999995 5693 2408;3747;4144 5392 10738;10739;10740 8657;8658;8659 8657 3 9606 Homo sapiens -0.06858656015390352 EDAATFSSLR Unmodified 1095.5197 0.51965261 4271 Q8TD16;Q8TD16-2;A0A087WYJ7;A8MVZ6;Q96G01-4;Q96G01-3;Q96G01 BICD2;BICD1 Protein bicaudal D homolog 2;Protein bicaudal D homolog 1 yes no 0 0 0 3 0 1 45.017 45.09 2 1.8539E-09 11881 20230619_1882_Aki_TMTPro18x_K_F3 203.19 188.41 121780 81132 104340 104650 113900 117390 117450 117300 157470 128540 112140 120350 146660 113370 114870 157980 142840 122780 112340 74534 107580 103940 117700 117750 119420 120120 156350 129140 118730 122350 147050 119540 119140 155940 136260 117070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53534000 5694 4271 5393 10741 8660 8660 1 9606 Homo sapiens -0.024286431500058825 EDAEHHPDEDVDESES Unmodified 1838.6715 0.6714744 4045 Q8IXG0;Q69YP1;Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 crn;DKFZp762M013;CRNKL1 Crooked neck-like protein 1 yes no 0 0 0 1 0 1 31.457 31.457 3 6.329E-11 6562 20230619_1880_Aki_TMTPro18x_K_F1 145.71 139.8 13479 6300.9 10011 14024 14130 25458 13738 15375 27882 17592 18981 28516 29353 25803 14285 21965 35957 35162 12404 5843.9 10557 13645 14459 24599 14298 16457 27225 18032 20386 28324 28948 26513 16025 22849 34188 33260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77064000 5695 4045 5394 10742 8661 8661 1 9606 Homo sapiens -0.2143144823221519 EDAGGMIQR Oxidation (M) 991.43929 0.4392938 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 1 0 1 0 1 30.366 30.366 2 0.009601 6130 20230619_1880_Aki_TMTPro18x_K_F1 80.438 54.266 14671 8017.9 13941 11560 18204 17230 20303 16123 21779 17755 20336 21049 20190 21216 18970 15778 25381 26460 13532 7382.4 14273 11460 18604 16970 20378 16596 22031 17971 20933 21212 20587 21591 19646 16553 24230 25015 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13002000 5696 2863 5395 10743 8662 8662 1702 1 9606 Homo sapiens -0.05676827744673574 EDAIEHFMK Unmodified 1118.5066 0.50664508 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 4 0.816 1 1 1 51.176 51.233 3 0.00061225 14528 20230619_1883_Aki_TMTPro18x_K_F4 98.943 63.529 122860 92826 113250 132170 104520 144380 134550 131350 176000 160450 154150 227150 270810 244380 143720 361290 306460 422640 113480 85324 115880 130340 110380 144660 135180 135920 176170 162750 164640 228320 266980 257710 158610 363830 292450 400350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 264770000 5697 261 5396 10744;10745;10746 8663 8663 1 9606 Homo sapiens -0.04786797533756726 EDALPGQK Unmodified 856.42905 0.42904669 1707 B4DY23;A0A7P0TA85;Q54A51;B4DNE1;P35613-2;P35613;A0A7P0TB04;A8MZ77;I3L192;A0A2R8YDZ0 hEMMPRIN;BSG Basigin yes no 0 0 0 3 0 2 41.238 41.297 2;3 0.021564 10215 20230619_1882_Aki_TMTPro18x_K_F3 87.616 58.043 122530 54575 115420 112650 145550 155020 118010 153120 158120 112360 154520 191500 136590 138000 143870 88350 181150 168220 112920 50567 118240 109460 148110 153380 121930 155360 158490 118170 158180 188770 140510 141440 147900 94260 172880 158970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 189470000 5698 1707 5397 10747;10748 8664;8665 8665 2 9606 Homo sapiens -0.004910674075972565 EDAMAMVDHCLK 2 Oxidation (M) 1450.5891 0.58907086 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;H0Y8T4;P43243-2;B4DRS1;B3KM87;Q5CZA7;B4DF66;Q9H4N1 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 yes no 0 2 0 3 0.816 1 1 1 40.191 40.248 3 0.010905 9674 20230619_1882_Aki_TMTPro18x_K_F3 63.473 50.706 101730 78891 102550 97988 122720 118310 113370 116080 129200 122610 132420 124570 127950 92971 104240 126230 127190 114270 94047 72401 104360 97681 125500 118080 115370 118880 130870 123610 135430 125330 129500 98755 107800 125580 121380 108710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132720000 5699 1059 5398 10749;10750;10751 8666;8667 8667 620;621 2 9606 Homo sapiens -0.1182001157940249 EDAMAMVDHCLK Unmodified 1418.5992 0.59924161 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;H0Y8T4;P43243-2;B4DRS1;B3KM87;Q5CZA7;B4DF66;Q9H4N1 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 yes no 0 0 0 4.5 1.12 1 1 1 1 52.377 52.436 3 1.123E-09 15098 20230619_1883_Aki_TMTPro18x_K_F4 150.21 124.83 610220 485620 560430 603400 410300 620790 619050 622620 672940 768560 558470 624170 852550 680390 485820 917120 806230 853500 563780 445620 571700 599960 445090 626050 613830 639760 678980 764480 591340 642140 843460 712830 520530 912860 768620 811150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 499500000 5700 1059 5398 10752;10753;10754;10755 8668;8669 8668 2 9606 Homo sapiens -0.0933140385416209 EDAMAMVDHCLK Oxidation (M) 1434.5942 0.59415623 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;H0Y8T4;P43243-2;B4DRS1;B3KM87;Q5CZA7;B4DF66;Q9H4N1 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 yes no 0 1 0 4 0 1 46.308 46.351 3 0.017686 12315 20230619_1883_Aki_TMTPro18x_K_F4 58.098 44.436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5701 1059 5398 10756 8670 8670 620;621 1 9606 Homo sapiens -0.10575707716793659 EDAPIGPHLQSMPSEQIR Oxidation (M) 2019.9684 0.96838888 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 1 0 3 0 1 42.36 42.426 3 7.2284E-06 10635 20230619_1882_Aki_TMTPro18x_K_F3 96.379 84.384 45007 37063 44162 49378 49522 59994 52234 50738 55784 55414 52322 59457 55856 42449 46442 55644 50966 63546 41612 34031 45053 48973 51128 59626 52617 52604 56518 55869 54043 59563 56415 45082 47697 56115 48807 60226 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81246000 5702 3152 5399 10757 8671 8671 1830 1 9606 Homo sapiens -0.0007965781851453357 EDAQEIADTPSGDK Unmodified 1474.6423 0.64234652 1064 A0A0S2Z377;E5RK69 ANXA6 Annexin yes no 0 0 0 1 0 1 43.181 43.181 3 2.8261E-05 11496 20230619_1880_Aki_TMTPro18x_K_F1 98.253 84.421 37849 26744 34789 37273 49699 54048 45498 46472 54791 45485 53832 53446 54433 46850 50784 42657 65715 55585 34945 24583 35835 36979 50343 53194 46398 47957 55227 46288 55300 53660 55381 48338 52475 43690 62661 52695 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47370000 5703 1064 5400 10758 8672 8672 1 9606 Homo sapiens -0.07598895999922206 EDAQVAAEILEIADTPSGDK Unmodified 2070.9957 0.99570907 1062 A0A0S2Z2Z6;P08133-2;P08133;B7Z582;Q6ZP35;E7EMC6 ANXA6 Annexin A6;Annexin yes no 0 0 0 1.5 0.5 1 1 64.183 64.186 3 3.6125E-11 20193 20230619_1880_Aki_TMTPro18x_K_F1 123.43 112.97 27529 22166 24876 30207 29486 36424 26112 31124 30346 45559 48402 52343 51233 45163 45445 54835 53853 69826 25433 20360 25593 29908 30217 36224 26688 32533 31463 45449 48957 52577 51933 47352 46836 55750 51555 66104 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 482120000 5704 1062 5401 10759;10760 8673 8673 1 9606 Homo sapiens 0.003051042028801021 EDAVEVLAIDNTSVR Unmodified 1629.821 0.82097959 752 A0A0S2Z4X4;T1WHH0;A0A2S1PH13;A0A2S1PH16;B2R6K1;A0A2S1PH34;A0A2S1PH23;A0A2S1PH20;A0A2S1PH09;A0A024RD82;P22033 MUT Methylmalonyl-CoA mutase, mitochondrial yes no 0 0 0 2 0 1 57.266 57.283 3 0.066659 17553 20230619_1881_Aki_TMTPro18x_K_F2 40.493 28.517 21516 20021 18644 22118 17867 22328 20029 17746 23449 23496 23174 24790 28378 25448 21301 24176 24067 25169 19891 18341 19190 22166 18711 22460 20174 18615 23695 23490 24022 25117 28469 26157 21953 24368 23008 23891 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47151000 5705 752 5402 10761 8674 8674 1 9606 Homo sapiens 0.03126193638968289 EDDALWPPPDR Unmodified 1309.5939 0.59388018 3696;5 P61326;F5H6P7;F5H3U9;A0A023T6R1;Q96A72;F5H6N1 MAGOH;MAGOHB;FLJ10292 Protein mago nashi homolog;Protein mago nashi homolog 2 no no 0 0 0 1 0 1 51.836 51.836 2 0.0021377 15106 20230619_1880_Aki_TMTPro18x_K_F1 101.38 83.517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5706 3696;5 5403 10762 8675 8675 1 9606 Homo sapiens -0.048533000584939145 EDDGVPVICQVEHPAVTGNLQTQR Unmodified 2661.2817 0.28167753 891 Q9BY67-3;Q9BY67-4;X5D7A8;Q9BY67;Q9BY67-5;X5DNF2;X5DQR8;X5DQS5;X5D8W0;A0A087X1W8;A0A0A0MTJ8;A0A4Z1;A0A087X0T8;Q9BY67-2;F5H8J9 CADM1 Cell adhesion molecule 1 yes no 0 0 0 3.5 0.5 1 1 51.365 51.393 3 2.0896E-20 14644 20230619_1883_Aki_TMTPro18x_K_F4 167.88 147.07 13613 7390.9 9396.6 12065 7714.1 14157 11972 11001 18828 12347 8498.5 13609 18197 13413 7958.3 26310 21077 24038 12529 6815.9 9894.9 11814 8329.4 14062 12022 11498 18374 12467 9651.4 13767 17788 14530 9099 26039 20060 22845 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60469000 5707 891 5404 10763;10764 8676;8677 8677 2 9606 Homo sapiens 0.017487957136381738 EDDLNSFNATDLK Unmodified 1480.6682 0.66816734 1222 A0A140VK27;P09960;B4DVZ8;P09960-2;P09960-4;P09960-3;Q49AK0 LTA4H Leukotriene A-4 hydrolase;Leukotriene A(4) hydrolase yes no 0 0 0 2 0.816 1 1 1 55.959 55.989 3 5.6175E-06 16971 20230619_1881_Aki_TMTPro18x_K_F2 96.371 73.65 52511 46086 49300 49568 54897 65715 57994 54533 63209 59665 72234 60869 64748 59635 62618 79835 70014 79012 48553 42217 50442 49998 56710 64973 58459 56620 64429 60087 73284 61791 66253 62605 64223 79798 66980 75022 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 331120000 5708 1222 5405 10765;10766;10767 8678;8679 8679 2 9606 Homo sapiens -0.05294001757602018 EDEAPILEQR Unmodified 1198.583 0.58298115 1971 A6NHN7;A6NHB5;Q14202-2;Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes no 0 0 0 1 0 1 43.798 43.798 2 0.0015037 11784 20230619_1880_Aki_TMTPro18x_K_F1 106.2 71.099 39377 27786 34464 33024 37726 42804 35591 38631 47903 46592 48284 53193 56360 49799 37734 49935 60958 52973 36342 25499 35455 33058 38916 42446 36406 39950 48136 46875 49880 53560 56415 51480 40041 50320 58044 50311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22852000 5709 1971 5406 10768 8680 8680 1 9606 Homo sapiens -0.008367024327753825 EDEEEDDDVVAPKPPIEPEEEK Unmodified 2537.1181 0.11806863 3849 Q13409-2;Q13409-3;Q13409-6;Q13409;Q13409-5;Q13409-7;A0A140VKE9;Q59GU5;E7EQL5;E7EV09;E7EQU2;E7EMU4;E7ESD3 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 1 1 0 1 51.231 51.231 4 5.3594E-12 14882 20230619_1880_Aki_TMTPro18x_K_F1 135.21 128.78 31888 23206 24004 34944 26733 36153 31164 31618 51756 45720 42402 60585 57924 60565 39654 87186 73498 123980 29405 21348 25157 34305 27786 36334 31782 33005 51194 45941 44721 60843 57889 63892 42796 89056 70345 117180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53073000 5710 3849 5407 10769 8681 8681 1 9606 Homo sapiens -0.0890056836688018 EDEEESLNEVGYDDIGGCR Unmodified 2184.8753 0.87533594 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 0 1 0 1 52.167 52.167 3 0.065466 15241 20230619_1880_Aki_TMTPro18x_K_F1 39.067 35.347 17782 40756 42708 15102 111850 146220 74395 68462 101120 38202 38268 56493 26523 34392 41513 43400 49992 88987 16818 37040 42236 19120 109860 136100 77886 74376 98841 40978 41855 55728 28290 36694 42444 45985 48020 83895 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44018000 5711 3656 5408 10770 8682 8682 1 9606 Homo sapiens -0.1697067185305059 EDEEESLNEVGYDDIGGCRK Unmodified 2312.9703 0.97029895 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 1 1 0 1 49.298 49.298 3 3.305E-08 14084 20230619_1880_Aki_TMTPro18x_K_F1 115.63 107.03 22816 18407 21095 26825 21327 27722 26452 30183 30237 31018 30426 34515 34329 29572 23512 35677 32275 32931 21083 16920 21619 26397 22311 27999 26499 30678 30608 31400 31393 34704 34408 30980 24650 35566 30800 31304 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81755000 5712 3656 5409 10771 8683 8683 1 9606 Homo sapiens -0.13366738381864707 EDEETLAR Unmodified 961.43525 0.43525428 1125 A0A0S2Z5E9;Q69YN2-3;Q69YN2;D3DR67;Q69YN2-2 CWF19L1 CWF19-like protein 1 yes no 0 0 0 1 0 1 34.218 34.218 2 0.046577 7665 20230619_1880_Aki_TMTPro18x_K_F1 72.038 45.815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5713 1125 5410 10772 8684 8684 1 9606 Homo sapiens -0.047005939667656094 EDEVEEWQHR Unmodified 1355.5742 0.57420737 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;B7Z9R6 EZR;HEL-S-105 Ezrin yes no 0 0 0 1 0 1 39.732 39.732 3 2.4333E-15 9969 20230619_1880_Aki_TMTPro18x_K_F1 218.6 173.53 43307 26966 52434 57155 56969 63130 53748 75258 67214 49232 65552 83575 76281 75526 61806 74577 94650 104780 40055 24948 52599 55276 58726 63591 54864 75299 67583 52198 67914 83007 76937 78096 64985 76607 90313 99168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93207000 5714 3456 5411 10773 8685 8685 1 9606 Homo sapiens -0.08935676069245346 EDFDSLLQSAK Unmodified 1251.5983 0.59829686 1704 P08195-4;P08195-5;P08195;P08195-3;A0A7P0Z4P5;A0A7P0TAN7;A0A7P0Z4A0;A0A7P0T9F7;F5GZS6;P08195-2;A0A7P0TBF8;B4E2Z3;F5H056;F5GZI0;A0A7P0TAS6;A0A024R599;A0A7P0T8U7;A0A7P0T8F1;H0YH36;A0A7P0TAT7 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 0 4.67 0.471 1 2 60.946 60.973 2;3 3.3116E-11 18293 20230619_1885_Aki_TMTPro18x_K_F5 190.86 157.6 74218 55873 63494 71218 41484 61635 57840 62198 80706 95881 97535 137530 123410 103560 112150 155030 130430 177000 68511 51296 65116 70533 45468 63035 58132 64438 81673 96319 100690 136510 124610 110680 115500 156020 124940 167710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 488580000 5715 1704 5412 10774;10775;10776 8686;8687 8687 2 9606 Homo sapiens -0.017438356355796714 EDFEWVYTDQPHADR Unmodified 1906.8122 0.81220581 256 A0A024R3P1;O15121 DEGS1 Sphingolipid delta(4)-desaturase DES1 yes no 0 0 0 1 0 1 53.197 53.197 3 0.059411 15662 20230619_1880_Aki_TMTPro18x_K_F1 50.874 43.672 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5716 256 5413 10777 8688 8688 1 9606 Homo sapiens -0.10492779997503021 EDFGQEK Unmodified 851.36611 0.36611208 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 2 0 1 40.913 40.986 2 0.029006 10252 20230619_1881_Aki_TMTPro18x_K_F2 84.743 26.166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5717 630 5414 10778 8689 8689 1 9606 Homo sapiens -0.06551633195670092 EDFPWSGK Unmodified 964.42905 0.42904669 635 A0A024RAV2;P46063;F8WA66;F8WD97;F5H4P4;F5H3W0;F5H2L2 RECQL ATP-dependent DNA helicase Q1 yes no 0 0 0 5 0 1 54.903 54.97 3 0.0070015 15814 20230619_1885_Aki_TMTPro18x_K_F5 84.743 63.841 37390 29915 33221 38861 34832 44181 42058 42857 52601 42982 44223 48446 50268 46089 40460 52196 51969 58899 34537 27463 34164 38570 36316 44220 42304 43877 52631 43624 46051 48856 50685 47937 42017 52693 49661 55846 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26135000 5718 635 5415 10779 8690 8690 1 9606 Homo sapiens -0.05459067407616658 EDFSDMVAEHAAK Unmodified 1448.6242 0.62419403 3850 Q13435;E9PPJ0;Q7Z3K9;H0YEX5 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 0 4.5 0.5 1 1 49.666 49.722 3 0.0089203 13668 20230619_1885_Aki_TMTPro18x_K_F5 67.275 48.443 46091 46293 48309 43432 34198 44721 44769 40996 60848 57451 53256 51126 52463 52305 53898 70281 61450 61043 42697 42341 48653 44163 36998 45062 45032 42590 60772 57018 54954 52259 53707 54823 55291 69771 58719 58079 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 256320000 5719 3850 5416 10780;10781 8691 8691 1 9606 Homo sapiens -0.08217309455608302 EDFVLTVTGK Unmodified 1107.5812 0.58119023 946 U3KQE8;A0A0A0MRX8;A0A1B0GU97;Q5VW28;A0A1B0GW37;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;A0A2R8Y7V8;O00712-4;O00712-5;A0A1B0GWJ4;A0A1B0GVN4;A0A1B0GTC1;B4DS74;U3KPY9;A0A0S2Z4H3;Q5W0Y9;O00712-2 NFIB Nuclear factor 1;Nuclear factor 1 B-type no no 0 0 0 6 0 1 59.944 60.005 2 0.023727 18120 20230619_1886_Aki_TMTPro18x_K_F6 87.149 24.073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5720 946 5417 10782 8692 8692 1 9606 Homo sapiens 0.0317028854929049 EDGAISTIVLR Unmodified 1172.6401 0.6401021 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 4 0.816 1 1 1 52.551 52.603 2 1.2631E-06 15221 20230619_1883_Aki_TMTPro18x_K_F4 188.04 153.95 890510 794190 863510 984420 738790 970090 998570 891210 933740 1114100 1078600 1080300 1171500 952260 973170 1308200 1196800 1246600 823680 728460 878570 978190 785090 979950 989860 922410 961540 1112700 1103900 1094200 1183200 1005500 1007300 1304400 1143300 1184500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2208900000 5721 3621 5418 10783;10784;10785 8693;8694;8695 8694 3 9606 Homo sapiens 0.060687648435987285 EDGELNLMK Oxidation (M) 1063.4856 0.48557529 4746 Q9Y5B9;Q0VGA3 SUPT16H FACT complex subunit SPT16 yes no 0 1 0 2.5 0.5 2 2 46.841 46.917 2;3 0.0019808 13010 20230619_1881_Aki_TMTPro18x_K_F2 86.744 48.442 120980 98881 122400 124870 123010 133110 128440 123900 149130 143890 159060 181590 180260 152080 160400 194200 185360 206120 111880 90743 124230 124080 127870 133780 129860 127790 151170 145510 163810 181630 182370 160070 165030 195040 177250 195570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190270000 5722 4746 5419 10786;10787;10788;10789 8696;8697;8698 8697 2890 3 9606 Homo sapiens -0.0436280763326522 EDGLAQQQTQLNLR Unmodified 1612.8169 0.81689726 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 3.5 0.5 1 1 46.185 46.246 3 1.7637999999999998E-22 12235 20230619_1883_Aki_TMTPro18x_K_F4 234.52 212.75 231070 194270 225420 209160 216910 251580 219380 213390 249660 284790 289280 303620 310630 267720 257080 344040 312680 325570 213660 177990 229220 210670 226190 250370 222110 222560 254430 284550 295920 306170 313870 281320 265920 343210 298720 309380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4121299999.9999995 5723 3606 5420 10790;10791 8699;8700 8699 2 9606 Homo sapiens 0.03500148935950165 EDGLPTGYLFVWHK Unmodified 1660.8249 0.82494275 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;Q6ZME7;H0Y827;Q96AY3-2 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 0 0 8 0 1 62.21 62.238 3 9.6259E-09 18745 20230619_1888_Aki_TMTPro18x_K_F8 122.46 114.07 121080 107230 90922 80417 89261 112490 129390 106970 126960 129160 113540 161390 142210 119820 148670 149640 132040 173480 111790 97969 94828 84000 94070 111270 127970 110290 129010 130300 118770 160780 144510 126570 150170 151220 126780 164370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 247800000 5724 167 5421 10792 8701 8701 1 9606 Homo sapiens 0.020963279233455978 EDGMVPFVFVGTK Oxidation (M) 1440.6959 0.69590241 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;P51114-3;B4DM21;B4DM78;B4DGH9;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 1 0 6 0 1 61.484 61.539 3 0.013835 18787 20230619_1886_Aki_TMTPro18x_K_F6 60.196 47.078 136350 138700 157670 168060 156970 155830 160220 164590 174900 196320 207530 213620 198530 181660 188740 226710 205790 234930 126440 127130 158420 167180 162990 158790 161920 168420 178750 197160 211040 215010 202530 190770 193270 227440 196940 222950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230040000 5725 1029 5422 10793 8702 8702 597 1 9606 Homo sapiens -0.006817700311103181 EDGMVPFVFVGTK Unmodified 1424.701 0.70098779 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;P51114-3;B4DM21;B4DM78;B4DGH9;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 0 7 0 1 63.233 63.266 3 4.0737E-08 19312 20230619_1887_Aki_TMTPro18x_K_F7 131.06 117.03 291710 225050 290370 330330 229350 293170 262160 291230 306340 402210 299890 290620 357150 297010 338510 382240 332160 353800 269630 206920 294400 324320 244310 299060 264040 300570 310010 397000 310490 300240 361740 310790 344450 381030 318020 336270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 339150000 5726 1029 5422 10794 8703 8703 1 9606 Homo sapiens 0.0056253383152125025 EDGNEEDKENQGDETQGQQPPQR Unmodified 2627.0968 0.096773109 3745 P67809;H0Y449;A0JLU4;Q2VIK8 YBX1 Nuclease-sensitive element-binding protein 1 yes no 0 0 1 1.5 0.5 1 1 33.349 33.378 4 4.5501999999999996E-88 7289 20230619_1880_Aki_TMTPro18x_K_F1 331.46 322.55 51648 28477 68874 68377 81331 96426 79426 83031 84404 82796 101790 82667 97618 72116 81304 36505 81841 42584 47792 26422 68732 66058 83440 94965 80381 85705 86380 83690 103280 83518 98871 72916 82719 37788 78028 40526 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 596020000 5727 3745 5423 10795;10796 8704 8704 1 9606 Homo sapiens -0.15169140623083877 EDGNEEDKENQGDETQGQQPPQRR Unmodified 2783.1979 0.19788414 3745 P67809;H0Y449;A0JLU4;Q2VIK8 YBX1 Nuclease-sensitive element-binding protein 1 yes no 0 0 2 1.5 0.5 1 1 30.8 30.832 4 2.5231E-63 6277 20230619_1880_Aki_TMTPro18x_K_F1 283.55 275.63 134260 115390 156330 132530 187970 140400 160760 172490 132500 168440 179950 96129 156800 99051 155800 84485 127210 66100 124350 105780 157210 132680 191310 142330 162940 173770 138660 168100 180840 101120 160380 101520 156440 84383 121560 63201 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 354720000 5728 3745 5424 10797;10798 8705;8706 8705 2 9606 Homo sapiens -0.12238688920342611 EDGPSVFGSFFLQHCVTMNTPVEK Unmodified 2725.2516 0.25162295 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 8 0 1 62.684 62.709 4 3.159E-13 18950 20230619_1888_Aki_TMTPro18x_K_F8 130.83 119.37 104690 91823 107570 116280 107460 124830 131790 125540 127890 154790 140530 151690 156350 133500 132710 149600 141350 151990 96867 84246 109110 115530 112280 125580 131350 128990 131180 154710 144360 153420 157930 139170 135940 150180 135230 144300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86453000 5729 1723 5425 10799 8707 8707 1 9606 Homo sapiens -0.041992792759174336 EDGQEYAQVIK Unmodified 1278.6092 0.6091959 3595 P47813;A6NJH9;O14602 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 0 0 0 2.5 0.5 1 1 48.036 48.111 2 2.3345E-09 13293 20230619_1882_Aki_TMTPro18x_K_F3 221.5 107.79 79262 54831 57401 79969 61646 81410 78389 75951 111280 102750 102260 144350 154000 129820 69777 186480 183230 188150 73054 50433 60353 78648 64367 82031 79042 78729 111170 103720 107770 144160 151670 137360 79339 186190 174250 178670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183130000 5730 3595 5426 10800;10801 8708 8708 1 9606 Homo sapiens -0.01896433261299535 EDGSGDRGDGPFR Unmodified 1363.5753 0.57527001 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 1 1.5 0.5 2 2 33.34 33.368 3 9.4331E-11 7041 20230619_1880_Aki_TMTPro18x_K_F1 175.21 140.52 151940 119750 134730 136640 182840 184720 177340 168170 219440 185530 203810 211890 211370 184660 184960 225400 249980 219210 140330 109800 139030 137270 185920 182830 180360 173390 220470 187470 210200 213030 214350 193480 192340 225400 238330 208390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2210400000 5731 3444 5427 10802;10803;10804;10805 8709;8710;8711 8709 3 9606 Homo sapiens -0.09197461700318854 EDGVITASEDR Unmodified 1190.5415 0.54151026 285 C9JJ54;A0A024R488;Q8IWB7;A0A494C0A6 WDFY1 WD repeat and FYVE domain-containing protein 1 yes no 0 0 0 1 0 1 38.805 38.805 2 7.1184E-23 9549 20230619_1880_Aki_TMTPro18x_K_F1 250.92 188.26 52970 38997 44858 50169 62873 67327 66656 61461 85588 70475 73769 75838 79824 70762 67377 83885 90498 77998 48888 35809 46556 49960 64013 66643 67521 63431 85614 70954 76509 76587 80738 73828 70094 83715 86278 74191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66424000 5732 285 5428 10806 8712 8712 1 9606 Homo sapiens -0.046138831921098244 EDGVTPYMIFFK Unmodified 1445.6901 0.69008876 986 A0A0P1J1R0;Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;A0A024RDY2;P13693-2;B4DKJ4;H0YCX0 TPT1 Translationally-controlled tumor protein no no 0 0 0 8 0 1 64.486 64.507 3 1.0398E-07 19717 20230619_1888_Aki_TMTPro18x_K_F8 137.89 105.83 53932 37151 52083 54834 37971 65729 52462 55594 67984 76284 61910 61951 89231 65290 59616 98945 80605 78646 49806 34177 52895 54038 41166 65323 52557 58024 68225 75563 64970 63702 88749 69052 62517 97628 76905 74921 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102460000 5733 986 5429 10807 8713 8713 1 9606 Homo sapiens -0.014928685427776145 EDIGVGSYSVCK Unmodified 1312.5969 0.59691665 1408 B1AXG1;P51812;A0A384MDW3;B7ZB17;B4DG22;B4DKZ2;A0A2R8Y603;Q15349-2;Q15349-3;Q15349;F2Z2J1;Q9UK32-2;Q9UK32;B7Z3B5;Q7Z2J4 RPS6KA3;RPS6KA2;RPS6KA6 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-2;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-6 yes no 0 0 0 5 0 1 50.399 50.475 3 0.001035 13972 20230619_1885_Aki_TMTPro18x_K_F5 88.021 71.767 54547 39644 45291 53255 49043 63042 53805 49201 82728 53031 61680 52701 68853 59288 47854 67592 65331 69134 50332 36422 46894 52760 50923 62656 54831 51343 81694 53486 64487 53809 69076 61385 50106 67818 62365 65634 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18137000 5734 1408 5430 10808 8714 8714 1 9606 Homo sapiens -0.046877929959691755 EDIIQGFR Unmodified 976.49779 0.49779495 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 4 0 1 51.205 51.232 2 0.00054064 14546 20230619_1883_Aki_TMTPro18x_K_F4 161.68 103.51 714980 491300 543550 676360 508340 792150 615450 680720 1097900 874650 806590 1438100 1484900 1423900 643910 2103500 1935300 2815400 659150 451610 566950 668930 536980 788910 629050 708450 1079700 891710 874040 1434100 1457000 1505300 749190 2137300 1845300 2663300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 571030000 5735 3444 5431 10809 8715 8715 1 9606 Homo sapiens 0.00860596892096055 EDIKPLK Unmodified 841.49092 0.49091866 2724 P11387;B9EG90;A0A7P0T9R7;Q6NWZ5;Q6PK95 TOP1 DNA topoisomerase 1 yes no 0 0 1 7 0 1 43.404 43.483 3 0.03082 10682 20230619_1887_Aki_TMTPro18x_K_F7 76.899 9.1416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5736 2724 5432 10810 8716 8716 1 9606 Homo sapiens 0.06383284011519663 EDILWCTEMER Unmodified 1480.6327 0.63265023 4759 Q9Y6K1;A0A0C4DG02;Q9Y6K1-2;Q6PJ37;Q8WVA9 DNMT3A DNA (cytosine-5)-methyltransferase 3A yes no 0 0 0 2.5 0.5 1 1 57.734 57.758 2 2.24E-06 17698 20230619_1881_Aki_TMTPro18x_K_F2 164.97 150.81 28343 24363 30244 29113 16597 26299 24575 26035 32620 33364 32202 35019 42387 32057 26982 43568 37401 38668 26231 22342 30358 28985 18606 26787 24591 26818 32773 33379 33503 35382 42187 33784 28375 43271 35693 36775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31780000 5737 4759 5433 10811;10812 8717 8717 1 9606 Homo sapiens -0.08844078810625433 EDITQSAQHALR Unmodified 1367.6793 0.67934115 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;Q59GP7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 4 0 1 39.396 39.438 3 1.1967999999999999E-40 9293 20230619_1883_Aki_TMTPro18x_K_F4 253.16 193.74 117980 84860 98787 113570 118220 133900 125750 130560 124600 138270 126540 142380 131190 105630 127480 130610 134980 141070 108860 77964 102340 112570 121510 133740 126330 133780 127210 139380 130080 143010 133540 111540 130130 131430 129120 133860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 899980000 5738 3823 5434 10813 8718 8718 1 9606 Homo sapiens 0.010208651272023417 EDITSSAQFALR Unmodified 1336.6623 0.6622941 2331 B2RNR6;Q96KR1;B3KP82;B3KVS4 ZFR Zinc finger RNA-binding protein yes no 0 0 0 5 0 2 51.746 51.82 2;3 0.0020671 14545 20230619_1885_Aki_TMTPro18x_K_F5 84.999 53.77 111230 91666 104140 120320 107780 125350 121430 115600 136840 135970 119190 126810 135130 112210 126320 140930 131710 145470 102800 84153 106540 119190 112110 126130 122100 119350 137910 136060 123890 128620 136980 117790 128990 141370 126070 138070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69571000 5739 2331 5435 10814;10815 8719;8720;8721 8721 3 9606 Homo sapiens 0.007429445213801955 EDIVVPVYLR Unmodified 1201.6707 0.67067394 2370 B3KP28;B4DGK3;G5E9A6;Q6P453;P51784 USP11 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 11 yes no 0 0 0 5.5 0.5 1 1 58.863 58.922 2 0.0096724 17464 20230619_1885_Aki_TMTPro18x_K_F5 79.474 52.872 103780 82166 94794 105180 87443 113850 107740 105080 124690 120030 111470 118540 124780 115220 114950 132060 123100 130740 95873 75423 97020 104420 92129 114210 107980 108370 125570 120490 115630 120280 126530 119810 117610 132330 117750 124160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20373000 5740 2370 5436 10816;10817 8722;8723 8723 2 9606 Homo sapiens 0.07790543228657043 EDIYAVEIVGGATR Unmodified 1491.7569 0.75692277 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;O14992 HSPA4;HEL-S-5a;HS24/p52 Heat shock 70 kDa protein 4 yes no 0 0 0 3.2 0.748 1 2 2 57.673 57.691 2;3 8.6429E-12 17480 20230619_1882_Aki_TMTPro18x_K_F3 179.41 154.86 137390 112610 117500 133430 113220 133370 126220 134440 157070 163360 155160 160300 174050 145500 153080 189740 159140 178590 126890 103280 121050 133050 118460 134900 127510 138030 158280 163450 160140 162390 176030 152920 156580 189220 152340 169680 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 522320000 5741 3544 5437 10818;10819;10820;10821;10822 8724;8725;8726 8725 3 9606 Homo sapiens 0.030714582726886874 EDIYSGGGGGGSR Unmodified 1210.5214 0.52144352 3836 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 2 0.816 1 1 1 35.67 35.708 2 1.0527E-27 7921 20230619_1881_Aki_TMTPro18x_K_F2 256.92 242.76 202160 120820 223190 229790 302880 327530 250250 275820 301550 247250 342490 338520 340420 295180 288010 165330 377490 328180 186780 111600 226190 224160 306850 322390 257080 284480 305700 254320 349280 337790 345070 299230 297980 177810 359980 310160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1376000000 5742 3836 5438 10823;10824;10825 8727;8728;8729 8728 3 9606 Homo sapiens -0.07539634132035644 EDKGEDSEPVTSK Unmodified 1419.6365 0.63653286 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A8Q3WLE0;Q6ZSB8;Q6ZT55 ENAH Protein enabled homolog yes no 0 0 1 2 0 1 37.917 37.981 3 7.7855E-05 8891 20230619_1881_Aki_TMTPro18x_K_F2 110.44 92.521 24520 10461 23735 29871 35694 55299 27828 43877 44848 29646 43299 78302 43768 49459 39293 21260 69214 70912 22599 9757.5 24411 28841 36084 53627 29073 45190 44604 32211 44746 76120 44560 50457 41577 24661 65946 66820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44489000 5743 918 5439 10826 8730 8730 1 9606 Homo sapiens -0.05649994511577461 EDKLECSEELGDLVK Unmodified 1762.8295 0.82949536 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;A0A087WX41;P53675-2;P53675;A4FU99 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 1 3.5 1.12 1 1 1 1 55.964 55.997 3 8.7443E-11 17005 20230619_1881_Aki_TMTPro18x_K_F2 161.99 122.83 756540 648060 719270 798470 599910 725380 787420 796350 744360 1005100 853050 833680 969600 725440 847210 1003200 791120 788790 699470 594470 732550 793160 637900 740630 782120 814220 766530 998710 875160 850400 979180 766860 861440 991300 757460 751480 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3530299999.9999995 5744 826 5440 10827;10828;10829;10830 8731;8732;8733;8734 8732 4 9606 Homo sapiens -0.02140620506702362 EDKYEEEIK Unmodified 1181.5452 0.54519866 1095;1096;3746;3405 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;Q6LDX7;Q8NI98;A0A494C034;A0A2R8Y6A3;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;P06753-7;Q8NAH0;Q5VU62;P67936;V9HW56;A0A2R8Y5V9;B4DVY2;B4DTB1;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A5F9UN72;K7EPB9;U3KQK2;Q5TCU3;P07951;V9HW25;CON__Q3SX28;A7XZE4;P07951-2;P07951-3 TPM3;DKFZp686J1372;TPM3-ROS1;OK/SW-cl.5;HEL-S-82p;TPM4;HEL-S-108;TPM2;HEL-S-273;TPM2b Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor;Tropomyosin alpha-4 chain;Tropomyosin beta chain no no 0 0 1 2 0.816 1 1 1 43.674 43.725 3 0.0020978 11509 20230619_1881_Aki_TMTPro18x_K_F2 93.345 30.062 + 3367700 2308000 2723000 3213200 3742300 4302300 3871500 3953700 5437800 4367100 4520000 4810500 5357600 4258400 3349400 5477000 5325400 4928300 3105900 2121800 2838700 3183200 3815700 4258200 3942200 4072800 5412400 4407800 4716100 4845700 5346400 4475400 3561800 5447200 5073400 4688200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6494199999.999999 5745 1095;1096;3746;3405 5441 10831;10832;10833 8735;8736;8737 8735 3 9606 Homo sapiens -0.03831213418243351 EDLDKVEPAVIEAQNAVK Unmodified 1967.0211 0.021135958 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 5 0 1 57.425 57.483 4 4.5072E-09 16865 20230619_1885_Aki_TMTPro18x_K_F5 127.22 105.98 63656 46349 60952 60991 46748 50940 59813 64948 66691 67423 73461 63756 68393 55175 72847 85191 63322 65984 58800 42573 61924 60283 50036 52593 59812 65443 67809 67869 74780 64686 70138 58770 73547 84015 60697 62866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82494000 5746 3881 5442 10834 8738 8738 1 9606 Homo sapiens 0.07630623515956358 EDLELINK Unmodified 972.51278 0.51277632 2323 F5H8H2;B7Z301;B2RDU6;Q59ET9;Q03426;A0A1B0GWC2;A0A8V8TMD0;F5H092 MVK Mevalonate kinase yes no 0 0 0 3 0 1 52.961 53.02 3 0.082645 15492 20230619_1882_Aki_TMTPro18x_K_F3 52.716 24.548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5747 2323 5443 10835 8739 8739 1 9606 Homo sapiens 0.025420439694244124 EDLESSGLQR Unmodified 1132.536 0.53603095 4675;4676 Q9UK76;J3KT51;Q9UK76-2;Q9UK76-3;J3KSH8 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed no no 0 0 0 1.5 0.5 1 1 39.574 39.574 2 2.6462999999999998E-23 9630 20230619_1881_Aki_TMTPro18x_K_F2 211.45 186.52 277630 163510 210520 275630 237840 317590 282610 266890 424490 340380 347000 385820 433650 328180 277890 411710 441300 441120 255750 150790 220340 269380 246970 316500 286530 278200 421130 341720 363470 387590 432360 345060 295050 413600 420660 418670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237730000 5748 4675;4676 5444 10836;10837 8740;8741 8741 2 9606 Homo sapiens -0.024935619838970524 EDLLDQLK Unmodified 972.51278 0.51277632 1781 Q6NUN2;A3F769;A3F768;A0A8I5KX72;O15226;O15226-2;A2I829 NKRF;NRF NF-kappa-B-repressing factor yes no 0 0 0 4 0 1 59.3 59.303 2 0.029653 18036 20230619_1883_Aki_TMTPro18x_K_F4 86.67 21.418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5749 1781 5445 10838 8742 8742 1 9606 Homo sapiens 0.02542043969435781 EDLMGLAIGTHGANIQQAR Oxidation (M) 2009.9953 0.99527233 1885;1771 A0A8I5KT56;Q06787-6;R9WQY1;A8MQB8;A0A8I5KZ21;G3V0J0;X5D907;Q06787-5;Q06787-4;Q06787-7;Q06787-2;Q06787-8;A0A087WXI3;A0A087WVL8;A0A8I5KS01;X5DQX7;A0A8I5KWH0;W5ZQ92;A0A087WY29;R9WNI0;A0A8I5KTZ9;Q06787-3;Q06787-9;Q06787;A0A8I5KUC2;A0A8I5KTT6;A0A0K0MJ24;Q06787-11;Q06787-10;A0A8I5KYA7;Q59GC1;R9WPL0;Q8IXW7;A0A994J7P9;P51116 FMR1;FXR2 Fragile X mental retardation protein 1;Fragile X mental retardation syndrome-related protein 2 no no 0 1 0 6 0 1 47.431 47.511 3 6.085600000000001E-25 12782 20230619_1886_Aki_TMTPro18x_K_F6 206.75 190.43 23563 18200 23248 28469 29184 27052 30557 24664 36678 31485 35399 35251 35312 30896 29029 30784 38578 36787 21778 16746 23760 27866 29846 27413 30898 25573 36951 31588 36367 35456 35758 32012 30164 31271 36806 34883 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114550000 5750 1771;1885 5446 10839 8743 8743 1147 1 9606 Homo sapiens 0.03067450792696036 EDLMGLAIGTHGANIQQAR Unmodified 1994.0004 0.0003577111 1885;1771 A0A8I5KT56;Q06787-6;R9WQY1;A8MQB8;A0A8I5KZ21;G3V0J0;X5D907;Q06787-5;Q06787-4;Q06787-7;Q06787-2;Q06787-8;A0A087WXI3;A0A087WVL8;A0A8I5KS01;X5DQX7;A0A8I5KWH0;W5ZQ92;A0A087WY29;R9WNI0;A0A8I5KTZ9;Q06787-3;Q06787-9;Q06787;A0A8I5KUC2;A0A8I5KTT6;A0A0K0MJ24;Q06787-11;Q06787-10;A0A8I5KYA7;Q59GC1;R9WPL0;Q8IXW7;A0A994J7P9;P51116 FMR1;FXR2 Fragile X mental retardation protein 1;Fragile X mental retardation syndrome-related protein 2 no no 0 0 0 7 0 1 53.478 53.545 3 6.973E-61 15148 20230619_1887_Aki_TMTPro18x_K_F7 308.29 293.09 54433 49139 58216 50697 54147 61973 61148 62384 76877 72636 66709 64948 71521 60160 65380 72680 69995 76854 50394 44994 58720 51270 56781 61840 61745 63949 77038 72638 69119 66119 72553 62900 66889 73047 66973 72927 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 642960000 5751 1771;1885 5446 10840 8744 8744 1 9606 Homo sapiens 0.04311754655327604 EDLNCQEEEDPMNK Unmodified 1749.6822 0.6821792 3162 K7EL20;O75821;Q6IAM0;A8K5K5;K7ENA8;B7Z1G0 EIF3G Eukaryotic translation initiation factor 3 subunit G yes no 0 0 0 1.5 0.5 1 1 46.594 46.633 3 6.7157E-09 12944 20230619_1880_Aki_TMTPro18x_K_F1 159.58 158.22 56146 35640 44605 50083 51437 57601 58400 55565 65972 73848 63385 65645 86004 67877 51777 90072 79246 72712 51756 32780 46413 49474 53114 57616 58697 57387 66764 73407 66121 67108 85424 71124 54977 89073 75511 69270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 382210000 5752 3162 5447 10841;10842 8745 8745 1 9606 Homo sapiens -0.16267460383141952 EDLQELNDR Unmodified 1130.5204 0.52038089 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;Q8N519;A0A6Q8PF80;A0A6Q8PGH0;A0A6Q8PF59;A0A6Q8PFM1;W5X314 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 1 0 1 41.751 41.751 2 1.042E-06 10829 20230619_1880_Aki_TMTPro18x_K_F1 192.26 153.47 564230 432760 421920 595600 818710 951140 811950 869750 1243100 745110 827940 1008100 929050 816630 729620 918510 315460 1009500 520430 397600 447730 592260 820340 932450 831430 890330 1223900 768760 874300 1004600 935160 853860 723980 925960 310630 955320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2194800000 5753 1428 5448 10843 8746 8746 1 9606 Homo sapiens -0.03965848500956781 EDLQLDK Unmodified 859.42871 0.42871234 2144;1327 A0A1W6S962;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;A0A494C0Q7 GTF2I General transcription factor II-I no no 0 0 0 3 0 1 46.573 46.651 2 0.026328 12606 20230619_1882_Aki_TMTPro18x_K_F3 90.657 21.87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5754 1327;2144 5449 10844 8747 8747 1 9606 Homo sapiens -0.006624871274652833 EDLRLPEGDLGK Unmodified 1340.6936 0.69359423 3110 I3L397;I3L504;P63241;P63241-2 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 yes no 0 0 1 4 1.41 1 1 1 1 1 49.942 50.007 3 1.618E-05 14123 20230619_1882_Aki_TMTPro18x_K_F3 133.16 89.877 4127700 3348700 3741900 4237000 3834200 4477900 4379100 4217200 4774200 5531400 5380100 5213800 5912400 5059200 5101300 6235600 5622200 5808100 3813600 3073200 3838100 4208400 3992800 4503400 4396500 4361900 4870100 5509500 5513400 5303400 5979000 5285800 5236800 6220300 5375500 5520400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 7696699999.999999 5755 3110 5450 10845;10846;10847;10848;10849 8748;8749;8750;8751 8749 4 9606 Homo sapiens 0.036875175554541784 EDLTEIR Unmodified 874.43961 0.43961137 691 P05388;A8K4Z4;A0A024RBS2;F8VU65;P05388-2;Q53HW2;Q53HK9;F8VWS0;Q6NSF2;F8VPE8;G3V210;F8VW21;F8VRK7;F8VQY6;Q8NHW5;F8VZS0;B4E3D5;F8VS58;F8VWV4 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 1.5 0.5 1 1 42.33 42.37 2 0.0038271 11105 20230619_1880_Aki_TMTPro18x_K_F1 152.39 55.319 1080700 678690 889930 1127100 1006500 1594900 1224400 1203800 1876300 1531200 1738300 2005600 2031800 1659700 1360700 2058300 2225400 2071800 996410 625560 923870 1106100 1047600 1566200 1241300 1265600 1867800 1545700 1803400 2002500 2033000 1744400 1446900 2060600 2119900 1968300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2211300000 5756 691 5451 10850;10851 8752;8753 8752 2 9606 Homo sapiens -0.0026308475318046476 EDLTEIRDMLLANK Oxidation (M) 1675.8451 0.84508585 691 P05388;A8K4Z4;A0A024RBS2;F8VU65;P05388-2;Q53HW2;Q53HK9;F8VWS0;Q6NSF2;F8VPE8;G3V210;F8VW21;F8VRK7;F8VQY6;Q8NHW5;F8VZS0;B4E3D5;F8VS58;F8VWV4 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 1 1 6 0 1 60.217 60.274 3 0.0018354 18242 20230619_1886_Aki_TMTPro18x_K_F6 79.744 67.768 46602 44177 49300 48550 51945 50587 51468 51087 57196 53415 57983 51734 48653 44040 54294 56221 52932 50717 43155 40466 49880 48725 53674 51047 52115 52221 57963 53809 59016 52366 50234 46307 55048 55993 50643 48238 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214850000 5757 691 5452 10852 8754 8754 422 1 9606 Homo sapiens 0.0341971080104031 EDLYLKPIQR Unmodified 1273.703 0.7030367 3447 P13639;Q8TA90;Q6PK56;B4DRE8 EEF2 Elongation factor 2 yes no 0 0 1 7 0.816 1 1 1 48.078 48.153 3 1.0357E-05 12718 20230619_1887_Aki_TMTPro18x_K_F7 156.83 135.26 3778400 3270900 3648500 3748500 3048100 3753900 3775900 3688700 3591200 4691900 4957700 3898100 4291200 3063300 4574700 3337600 3061100 1950400 3494100 2998200 3709100 3747700 3235300 3794200 3761800 3799800 3726600 4660800 4987000 3965100 4406700 3202900 4556200 3277700 2935800 1871300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5404800000 5758 3447 5453 10853;10854;10855 8755;8756 8755 2 9606 Homo sapiens 0.07713330631645476 EDMAALEK Oxidation (M) 921.41135 0.41134771 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;B4DN58;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;B4DQK4;Q9UQM3 TUBA1B;TUBA4A;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 0 1 0 2 0.707 1 2 1 41.254 41.307 2 0.0082487 10377 20230619_1880_Aki_TMTPro18x_K_F1 97.635 54.512 1561800 950370 1327600 1549400 1545600 1824300 1555300 1616900 2316500 1769400 2231600 2483900 2183100 2064800 1966800 1949300 2508000 2427700 1440000 875880 1372800 1517800 1591500 1817900 1591000 1670400 2311000 1803200 2292700 2473800 2221300 2136800 2033400 1987900 2393900 2301100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1912399999.9999998 5759 2408;3747;4144 5454 10856;10857;10858;10859 8757;8758;8759;8760 8757 1486 4 9606 Homo sapiens -0.052501507247939116 EDMAALEK Unmodified 905.41643 0.41643309 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;B4DN58;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;B4DQK4;Q9UQM3 TUBA1B;TUBA4A;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 0 0 0 2.5 1.12 1 1 1 1 47.409 47.459 2 0.010092 12966 20230619_1882_Aki_TMTPro18x_K_F3 99.802 52.059 1249600 822100 1020600 1175000 1065500 1467900 1126400 1192200 1863800 1488800 1606600 1889600 1884200 1607300 1440500 1691300 2031500 1901700 1152300 756150 1057700 1160700 1109300 1454700 1154900 1244900 1845700 1502200 1673800 1889300 1893900 1671700 1506400 1709400 1937100 1804500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5792800000 5760 2408;3747;4144 5454 10860;10861;10862;10863 8761 8761 1 9606 Homo sapiens -0.04005846862173712 EDMAVHVR Oxidation (M) 971.44946 0.44946455 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;H0Y659;Q5H935;Q53FW4 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 1 0 1.5 0.5 1 1 28.39 28.39 3 0.0034485 5025 20230619_1881_Aki_TMTPro18x_K_F2 92.439 72.653 23790 15007 23030 21257 25091 31100 21269 27724 32724 16387 21669 26302 18596 16001 18873 18433 21327 20371 21961 13805 23478 21080 25850 30601 22037 28232 32188 17493 22646 25894 19099 16965 19319 18597 20375 19331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10032000 5761 594 5455 10864;10865 8762;8763 8763 345 2 9606 Homo sapiens -0.03740220019449225 EDMAVHVR Unmodified 955.45455 0.45454993 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;H0Y659;Q5H935;Q53FW4 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 2.5 0.5 1 1 33.856 33.918 3 0.00017338 7133 20230619_1882_Aki_TMTPro18x_K_F3 143.61 125.76 56559 41051 53892 62463 62482 65277 59348 59408 81376 69113 76908 89020 79395 73418 70975 77289 107570 88686 52241 37769 55140 61318 64153 65649 60702 61379 81446 69965 79297 88888 80640 76426 74362 78234 102430 84183 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64790000 5762 594 5455 10866;10867 8764;8765 8765 2 9606 Homo sapiens -0.024959161568403943 EDMEEDQEHTYR Oxidation (M) 1596.5998 0.59982978 7 B4DKC1;A0A0C4DFM1;A0A024QYR3;Q92544;B4DH88 TM9SF4 Transmembrane 9 superfamily member 4 yes no 0 1 0 1 0 1 29.17 29.17 3 4.8119E-05 5643 20230619_1880_Aki_TMTPro18x_K_F1 116.06 111.26 8270.6 5091.2 13182 11402 18845 16641 14435 15717 14537 15044 21219 16510 15572 16015 15039 9866.1 17980 16376 7673.4 4715.1 13052 11057 18959 16406 14825 16092 15065 15283 21175 16682 16062 16209 15435 10399 17163 15491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9564900 5763 7 5456 10868 8766 8766 2 1 9606 Homo sapiens -0.1746061439978348 EDMEYALR Oxidation (M) 1041.4437 0.44371047 3844 Q13242;A8K3M9;H0YIB4 SRSF9 Serine/arginine-rich splicing factor 9 yes no 0 1 0 1 0 1 39.089 39.089 2 0.0065074 9643 20230619_1880_Aki_TMTPro18x_K_F1 104.37 62.474 74373 43430 50254 79718 64132 77675 60681 68211 89243 86893 104730 122010 107660 98109 66695 124610 127100 130550 68463 40101 53442 77380 65602 78412 62284 70864 89901 87895 106890 121450 107940 103340 72197 124950 121050 123920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192760000 5764 3844 5457 10869 8767 8767 2517 1 9606 Homo sapiens -0.075353633217901 EDMEYALR Unmodified 1025.4488 0.44879585 3844 Q13242;A8K3M9;H0YIB4 SRSF9 Serine/arginine-rich splicing factor 9 yes no 0 0 0 1.5 0.5 1 1 45.805 45.846 2 0.0053077 12505 20230619_1881_Aki_TMTPro18x_K_F2 113.89 67.518 335500 226090 271570 306760 297840 356980 312460 320330 441050 353980 365810 409720 431100 356700 316380 427290 453710 449980 309390 207810 281820 303710 308320 356190 318120 330680 438860 357870 381850 411550 432570 373480 331910 429190 432760 427170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 205340000 5765 3844 5457 10870;10871 8768;8769 8769 2 9606 Homo sapiens -0.0629105945918127 EDMPPEHVR Oxidation (M) 1124.4921 0.49205765 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 1 0 1 0 1 27.441 27.441 3 0.0004293 4980 20230619_1880_Aki_TMTPro18x_K_F1 110.76 90.427 14823 8650.9 15512 16083 20697 21199 17636 19608 24318 17793 25181 25805 24479 21137 19761 19278 34709 30874 13688 7989.3 15779 15686 21002 21001 18170 20087 24401 18335 25759 25673 24800 21871 20995 20053 33038 29216 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21761000 5766 1863 5458 10872 8770;8771 8770 1191 2 9606 Homo sapiens -0.06520869681889963 EDMPPEHVR Unmodified 1108.4971 0.49714303 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 1 0 1 31.749 31.749 3 0.0022388 6680 20230619_1880_Aki_TMTPro18x_K_F1 90.15 72.92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5767 1863 5458 10873 8772 8772 1 9606 Homo sapiens -0.05276565819258394 EDMPPEHVRK Oxidation (M) 1252.587 0.58702067 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 1 1 3 0 1 30.187 30.28 4 0.070636 5688 20230619_1882_Aki_TMTPro18x_K_F3 52.579 35.143 14477 10136 11866 14621 17668 18992 15793 20632 22795 15194 19907 17084 17825 16286 15261 18439 23148 18859 13355 9321.2 12375 14448 17858 18903 16253 20799 22679 15716 20443 17254 18155 16934 16014 18510 22042 17923 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13387000 5768 1863 5459 10874 8773 8773 1191 1 9606 Homo sapiens -0.029169362107040797 EDMTYAVR Oxidation (M) 999.43315 0.43314579 3140 J3KTL2;Q07955;Q59FA2;Q07955-3;Q07955-2;A8K1L8;J3KSR8;A0A2I7N9Y9;B7Z570 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 1 0 1.5 0.5 1 1 34.692 34.72 2 0.0014701 7545 20230619_1881_Aki_TMTPro18x_K_F2 134.81 111.79 158210 94327 107010 158380 157720 179110 146330 173320 239470 159200 205730 191050 195380 166920 122740 202430 234770 194090 145650 86977 114040 154780 159870 179280 151050 177020 237010 162790 211940 191860 196420 174810 132700 202150 223260 184580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 332910000 5769 3140 5460 10875;10876 8774;8775 8775 1824 2 9606 Homo sapiens -0.06659345976208897 EDMTYAVR Unmodified 983.43823 0.43823117 3140 J3KTL2;Q07955;Q59FA2;Q07955-3;Q07955-2;A8K1L8;J3KSR8;A0A2I7N9Y9;B7Z570 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 2.5 0.5 1 1 40.959 41.026 2 0.00011668 10030 20230619_1882_Aki_TMTPro18x_K_F3 178.08 142.98 474740 300410 305040 430940 397050 493520 387110 454080 641460 493450 531510 520230 618170 507300 325680 654480 708410 560920 437060 276380 326160 424950 406300 493100 398680 467470 634320 497860 553650 526880 614610 531420 359190 649100 673080 534300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1172600000 5770 3140 5460 10877;10878 8776;8777 8777 2 9606 Homo sapiens -0.05415042113600066 EDNYRGPAVR Unmodified 1175.5683 0.56833414 4753 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 1 4 0 1 31.081 31.145 3 0.0029291 6016 20230619_1883_Aki_TMTPro18x_K_F4 84.17 48.226 31585 21719 37387 29691 50276 43545 32254 41126 33258 30741 40206 44878 46232 39980 42481 26399 41833 47697 29221 19963 37618 29523 50609 42946 33650 41869 34121 32049 41226 44719 46806 40707 43136 27997 40073 45055 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9221200 5771 4753 5461 10879 8778 8778 1 9606 Homo sapiens -0.012427297902377177 EDPDMASAVAAIR Unmodified 1344.6344 0.63436479 3882 Q14232;F5H0D0;Q14232-2;H0YGG4 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes no 0 0 0 3 0 1 52.205 52.27 2 1.3320999999999999E-21 15172 20230619_1882_Aki_TMTPro18x_K_F3 240.1 197.5 40672 30397 39082 41849 35511 55749 42154 50799 62263 53586 45697 74340 86638 79004 41651 94921 100840 140570 37575 27931 39817 41491 37520 55144 42751 52285 61667 54680 49596 74660 85106 82232 46714 97484 96182 132880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43418000 5772 3882 5462 10880 8779 8779 1 9606 Homo sapiens -0.02416701730362547 EDPFVFIPEDDPLFPPIEK Unmodified 2243.1038 0.10380295 3813 Q08J23-2;Q08J23;Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 0 0 0 3 1.41 1 1 1 1 1 66.256 66.275 3 0.013442 21322 20230619_1881_Aki_TMTPro18x_K_F2 53.779 45.491 7271.4 4484.2 5268.2 7189.5 4803.7 4740.1 5936.6 5805.8 5354.8 10331 7252.9 8800.5 8451.1 6718.7 7736.4 10704 8977.5 10085 6698 4131.5 5521.6 7001.4 5055 5003.7 5905 5981.4 5590.8 10139 7416.6 8924.1 8551 7213 7965 10647 8585.2 9581.7 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29139000 5773 3813 5463 10881;10882;10883;10884;10885 8780 8780 1 9606 Homo sapiens 0.03197520524054198 EDPIGAGALYDYGR Unmodified 1495.6943 0.69432251 2 A0A0A0PZ76;Q4GLZ5;V9M958;V9K2Q7;V9JR71;V9JDL3;V9JBQ6;V9J6I9;V9J4J6;V9J1G8;Q8WCX7;V9N931;U5Z977;T1Q6P2;T1Q6I5;T1Q524;R9Y8B2;Q9B302;Q9B2Y0;Q9B2U4;Q9B1K4;U5Z8L9;U3L5W2;H9QNZ6;Q9B0M9;Q6VKJ8;Q8HG31;Q6VLM1;Q8HAX7;Q7YEG7;Q7YCE9;Q7YCC3;Q7Y668;Q7GXW8;Q7GWZ6;Q7GRU6;Q8HG29;Q6VII9;Q4ZEJ2;Q6RRP1;Q6RRL4;Q6RR68;Q6RMK3;Q5XRX3;Q5XRI0;Q5S9S1;Q541N0;Q4GSE3;L7S6V9;A0A1U9XMF5;L7NVW1;Q4G7B0;Q4F694;Q4F4P8;Q4F4M2;Q4F3Y8;Q4F290;Q4F0F3;L7XUF6;Q4F0B4;Q305V5;Q4GIS7;Q305R6;Q2HLE2;Q20CU2;Q0ZEY1;Q0G8P9;L7YIF0;Q4EWR6;A0A8E5NJZ6;A1DUW2;H9QNX0;Q305Y1;Q4GE26;L7XZW0;I3Q2Q4;L7NV95;K7WVK8;K7WBE4;K4GXX7;J7LLQ9;J7HR70;L7XJA6;J3RFY3;J3QZS3;I1SYL0;L7S6N1;H9SWX0;H9SS69;H9SPJ6;H9SCA6;H9SBJ6;H9S7N1;J3RF73;Q4GN61;L7XU16;Q8HAZ5;A0A0A0PMV0;A0A8A6VJN5;A0S9S4;H9QH02;H9QE77;H9Q8L4;H9Q1I1;H9PPP7;H9PHK1;H9P7D9;H9P0H1;H9NZ79;G9LF58;H9NWC8;H9E7R9;H9E7L7;H9E7J1;H7BU52;H6TVT6;G9LKY6;G9LKQ8;G9LGV6;G9LGM8;H9LLK6;G9LFR6;G9LCN7;E5QBL9;G9B0P8;G9AZH0;B9ECT7;B9EEZ1;G5D8P0;G5D8K1;G4W466;G4W036;G3M8K8;G3M3S3;G3CA57;G3CA18;G3C9Z2;G1JVH5;F6N1U0;F6MZF8;F2WG63;E9LAG9;E9L8Y6;E9L8W0;E9JWL7;E5KYG1;E5KYE8;E5KYD5;C8YA62;E5DY72;E5DY33;E5DY20;D8L5G9;D6R5P0;D6C1N3;D2KI69;C9D643;H9QLS9;B3VLA5;E5DYD7;C8XWK4;C8XV66;C7B3B7;B8RC54;B8R3C2;B4YG26;B4YG13;B4YBV7;C8YC64;C8YCT5;B2Y8L1;B2D5P9;A6Z1T4;B2D3W3;B1W9K7;B0Z776;A7XTS4;A7LER5;A6ZHJ2;A6ZGV0;A6ZDH3;A6ZBM4;A6YZJ2;E5E1V9;A6YXL7;A6YXB3;A6YX87;A6YWD9;A4ZMD8;A1DVP8;A1DVF7;B2XHG7;B2XQV4;A0A1W6Q5M3;A0A1W6EQ87;A0A343LHW6;A0A410RF09;A0A6B9RBN2;A0A6B9R9U8;A0A3G5BVR3;A0A4D6FPU0;A0A346M088;A0A343YSJ3;A0A343YSA2;A0A343YS84;A0A343YS63;A0A343VEG0;A0A343VE30;A0A343UGN4;A0A343UAU3;A0A343SX69;A0A343SU63;A0A346M0J0;A0A343R0P6;A0A343R0G8;A0A343R0F4;A0A343R0E2;A0A343R0C7;A0A6B9RCW7;A0A6B9RE42;A0A6B9REQ2;A0A8A6VG61;A0A3S9JI62;A0A3S9JHQ7;A0A3S8PUR6;A0A3S5HPG9;A0A649YH45;A0A3Q8R2B1;A0A6B9Q990;A0A6B9RAN5;A0A8A6VIQ8;A0A8A0WQL1;A0A6B9RG54;A0A8A0WPU9;A0A7D5PNM8;A0A7D5PIA8;A0A7D5PHA9;A0A6M6D3I4;A0A6H0MVH5;A0A6H0MT10;A0A6G9L5T8;A0A6G7GCT9;H9S313;A0A343LFB1;A0A343KU39;A0A218N8X2;A0A7D5TJ37;A0A0A0PU97;A0A0A0PPX2;A0A0A0PWY2;A0A3S9JHX1;A0A0A0PSE8;A0A0A0PYV6;A0A0A0PXR7;A0A0A0PXN1;X2C0V5;A0A0A0PRG6;X2C0I6;X2C0I9;X2C0J3;X2C0J7;A0A0A0PVF3;A0A0A0PMS4;A0A0A0PV27;A0A0A0PMJ8;A0A0A0PWW8;A0A7T5BMN8;A0A0A0PPE7;A0A343KSU7;A0A345ALM5;A0A343KLH3;A0A343KKM4;A0A343R0H9;A0A345AIS6;A0A343YSN0;A0A345AJR3;A0A346M043;A0A346LZS7;A0A345ALS8;A0A345ALF0;A0A0A0PPV1;A0A345AKK1;A0A345AK82;A0A345AK58;A0A345AJX8;A0A345AJC1;A0A345AJA8;A0A345AIW5;X2CLX6;A0A343IN94;A0A3T0U9B9;A0A455LBB4;A0A1S6NXQ2;A0A4D6CRT0;A0A343GLR0;A0A141ZRI9;A0A8B6QR71;A0A343FU89;A0A343FRU4;A0A343F746;A0A343F3T7;A0A343ERW5;A0A343I7I2;A0A343E9A7;A0A343E981;A0A343G1C3;A0A141ZRG3;A0A141ZQW8;A0A141ZQP0;A0A059RMZ8;A0A059RJ10;A0A059RI68;A0A059RG71;A0A343HXH0;A0A059QTJ2;A0A343GPN7;A0A343HGY0;A0A4D6FHS9;A0A141ZT09;A0A1S6MTN6;A0A1S6MSJ1;A0A1S5SIL1;A0A1P8SH24;A0A1L1ZEF0;A0A1J0QN41;A0A1J0Q0D7;A0A1J0PWD1;A0A143FYP7;A0A141ZSL6;A0A059RBF9;A0A141ZSC5;A0A141ZRQ4;A0A1Z4VK92;A0A342LF89;A0A342Y9S2;A0A342YB92;A0A343JIW4;A0A343J412;A0A343J3Z9;A0A059QQW3;A0A343JJA6;A0A059QLG0;A0A343KKE3;A0A097Q221;A0A096WNH2;A0A096W049;A0A075X6N0;A0A075C7T2;A0A068C695;A0A0E3JV88;A0A343G5J2;A0A059QPR0;A0A649YFE0;A0A0D4WPD0;A0A649YEW0;A0A5P9RNE4;A0A5P8DNJ3;A0A5B9R8S7;A0A4Y6AA63;A0A4Y6A3Z8;A0A343JYI0;A0A0E3M0M8;A0A343E9F9;A0A097Q4B7;A0A059S6I0;A0A023R5S7;A0A059RR87;A0A023R385;A0A023QQE5;A0A023QFF6;A0A023Q568;A0A023I8P3;A0A023I8N0;A0A023I852;A0A059RNZ2;A0A059QF73;A0A068BPU9;A0A0G2UP70;A0A109QTL5;A0A0X9TT95;A0A0U2DZT5;A0A0P0K707;A0A0N7AHK7;A0A0N6YMM8;A0A023I7W4;A0A343JJ40;A0A0G2UR40;P03923 ND6;NADH6;MT-ND6 NADH-ubiquinone oxidoreductase chain 6 yes no 0 0 0 3.5 0.5 1 1 54.869 54.898 2 0.0001542 16323 20230619_1882_Aki_TMTPro18x_K_F3 120.55 92.152 61371 48414 59019 64687 59954 79645 74010 68447 73753 70824 81652 87809 92054 78487 74512 98932 88932 105870 56717 44462 60225 64162 62670 79095 73794 70785 75451 71981 83893 88091 92796 82349 77015 99397 85067 100420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26991000 5774 2 5464 10886;10887 8781;8782 8781 2 9606 Homo sapiens -0.03369687795475329 EDPLIIPVPASENPFR Unmodified 1792.9359 0.93594977 2199 B1APZ0;P50150 GNG4 Guanine nucleotide-binding protein subunit gamma;Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4 yes no 0 0 0 4.5 0.5 2 2 63.015 63.042 2;3 3.4987E-14 19634 20230619_1883_Aki_TMTPro18x_K_F4 224.24 168.84 54672 46538 46533 55443 43351 45105 42677 47182 59425 51614 64247 73644 67684 59848 63149 64711 64150 68535 50504 42676 47937 55127 45296 46464 43623 48206 59748 52604 65900 73273 68762 62420 64359 65170 61399 65038 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 507470000 5775 2199 5465 10888;10889;10890;10891 8783;8784 8783 2 9606 Homo sapiens 0.07119922840820436 EDPLLTPVPASENPFR Unmodified 1780.8996 0.89956426 3007 G3V3J9;G3V2N0;P59768 GNG2 Guanine nucleotide-binding protein subunit gamma;Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 yes no 0 0 0 4.5 0.5 2 2 61.299 61.318 2;3 2.8179E-15 18859 20230619_1883_Aki_TMTPro18x_K_F4 234.92 208.98 244410 206160 240800 262250 200790 262070 247000 259150 454000 302000 287140 321190 366640 304950 283060 401900 378690 432150 226010 189180 244480 260220 213720 264840 252660 266110 443720 303920 306010 324710 367860 320320 295250 403600 361770 409950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 802900000 5776 3007 5466 10892;10893;10894;10895 8785;8786;8787;8788 8787 4 9606 Homo sapiens 0.04035045944101512 EDPNLVPSISNK Unmodified 1311.667 0.66704513 1471 P10606;A0A384NL93;Q6FHM4 COX5B Cytochrome c oxidase subunit 5B, mitochondrial yes no 0 0 0 4.67 0.471 1 2 51.572 51.623 2;3 2.2181E-05 14704 20230619_1883_Aki_TMTPro18x_K_F4 94.538 83.033 143730 105100 125280 182180 150410 189230 182250 189390 254400 145070 156360 164290 194840 173950 136430 186290 212150 203120 132670 96861 129590 177530 155440 190610 184000 192310 250820 149830 166700 166340 195050 179760 144200 187810 202190 192780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 670690000 5777 1471 5467 10896;10897;10898 8789;8790 8789 2 9606 Homo sapiens 0.02367828664159788 EDPNLVPSISNKR Unmodified 1467.7682 0.76815616 1471 P10606;A0A384NL93;Q6FHM4 COX5B Cytochrome c oxidase subunit 5B, mitochondrial yes no 0 0 1 7 0 1 45.396 45.481 3 0.0014885 11516 20230619_1887_Aki_TMTPro18x_K_F7 81.632 55.508 125210 147090 198800 156850 254780 261540 259320 189230 187240 145420 168090 118930 142180 105160 253560 98467 112580 124080 116660 134610 196450 159060 259730 254960 258810 197250 193950 148630 172200 121600 150940 108740 247240 101000 109160 117540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98971000 5778 1471 5468 10899 8791 8791 1 9606 Homo sapiens 0.05298280366855579 EDPTAVACTFSCMMK Oxidation (M) 1762.7034 0.70344869 4753 Q9Y678;B3KW21;Q8WUI6;H0Y8X7;H0Y8G2 COPG1;COPG Coatomer subunit gamma-1 yes no 0 1 0 6.5 0.5 1 1 56.954 57.018 3 0.0090866 16663 20230619_1887_Aki_TMTPro18x_K_F7 63.16 58.612 30520 22714 26142 30728 25174 29187 29018 30350 37214 30170 31254 26775 30750 25444 31994 34459 31776 32541 28171 20867 26934 30346 26364 29649 29291 30922 37187 30412 32299 27322 31456 26772 32514 34367 30410 30925 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14704000 5779 4753 5469 10900;10901 8792 8792 2898 1 9606 Homo sapiens -0.14739489879639223 EDPTSFR Unmodified 850.3821 0.38209649 1375 B4DRA5;B4DJW8;A0A2R8YFH5;Q15437;Q5QPE1;B4DS04 SEC23B Protein transport protein Sec23B yes no 0 0 0 2 0 1 37.82 37.883 2 0.0090138 8846 20230619_1881_Aki_TMTPro18x_K_F2 106.42 69.387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5780 1375 5470 10902 8793 8793 1 9606 Homo sapiens -0.049079269587537055 EDPTVSALLTSEK Unmodified 1388.7035 0.70349021 2269 V9HWG9;B2R983;P78417;Q5TA02;P78417-3;P78417-2;Q5TA01 HEL-S-21;GSTO1 Glutathione S-transferase omega-1 yes no 0 0 0 3.2 0.748 1 2 2 57.736 57.753 2;3 2.5936E-07 17410 20230619_1883_Aki_TMTPro18x_K_F4 185.96 157.79 66889 55910 63654 68727 64719 81842 66877 68769 94784 90678 89769 94728 105290 87390 85554 113020 109910 114810 61834 51290 64986 68515 67341 81443 68179 71736 94806 90629 93027 95747 106040 91758 88841 113170 104960 109010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259740000 5781 2269 5471 10903;10904;10905;10906;10907 8794;8795;8796 8796 3 9606 Homo sapiens 0.024686607701596586 EDQQTVLKPQFYEIK Unmodified 1864.9571 0.95707914 1794 A0A8Q3SHT1;A0A8Q3SHX7;Q9BSC4;A0A8Q3SHW5;B4DS83;Q9BSC4-2;Q9BSC4-4 NOL10 Nucleolar protein 10 yes no 0 0 1 7 0 1 55.316 55.377 3 1.4841E-07 15924 20230619_1887_Aki_TMTPro18x_K_F7 128.9 104.36 50778 43163 44732 54387 38494 58213 54170 49329 54311 67686 68163 69550 68809 61255 50968 78422 71147 71220 46918 39604 45933 54031 41026 58333 53718 51522 55920 67462 69300 70243 69390 64342 53409 78047 67879 67721 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154070000 5782 1794 5472 10908 8797 8797 1 9606 Homo sapiens 0.05919888149651342 EDQSILCTGESGAGK Unmodified 1550.6883 0.68825085 148;3549;1719;4165 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;A0A8I5KYI1;Q5BKV1;A0A8I5KU92;A0A494C024;A0A2R8Y4C3;A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43 MYH9;MYH11;MYH10;MYH14 Myosin-9;Myosin-11;Myosin-10;Myosin-14 no no 0 0 0 2 0 1 47.157 47.233 3 1.1177E-07 13172 20230619_1881_Aki_TMTPro18x_K_F2 105.28 82.474 187960 161640 190310 191870 217390 269540 256500 232290 261920 209020 205530 196000 224040 174780 207980 220510 216780 219450 173880 148210 193640 192310 224880 265720 256390 239250 264150 212220 214320 198940 227230 183510 212330 220770 207340 208440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109250000 5783 148;1719;3549;4165 5473 10909 8798 8798 1 9606 Homo sapiens -0.06506574089303285 EDQTEYLEER Unmodified 1310.5626 0.56263964 751;3177;4017 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;Q86U12;G3V2J8;A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF7;Q58FF6 EL52;HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 no no 0 0 0 4.71 2.49 1 1 1 2 1 1 41.106 41.155 2 2.8047E-09 10533 20230619_1880_Aki_TMTPro18x_K_F1 195.27 142.55 879700 639120 693580 806830 758370 956340 826510 833650 1085200 1142300 1156300 1204400 1087800 1043100 540520 1955000 695600 1225700 811440 586790 721840 802750 786310 952600 837410 868300 1094100 1139900 1179300 1216100 1087200 1127600 576140 1904600 667720 1169900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 46086000000 5784 3177;751;4017 5474 10910;10911;10912;10913;10914;10915;10916 8799;8800;8801;8802;8803 8799 5 9606 Homo sapiens -0.08021917883252172 EDQTEYLEERR Unmodified 1466.6638 0.66375066 751;3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;Q86U12;G3V2J8;A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF7 EL52;HSP90AA1;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 0 0 1 1.5 0.5 1 1 36.433 36.462 3 2.7047E-17 8527 20230619_1880_Aki_TMTPro18x_K_F1 231.67 206.82 168020 198920 166320 140330 193280 138720 150220 171350 150000 161640 170790 121400 174490 121020 168260 193780 191450 123620 155780 181510 169200 146900 196860 141620 154130 172440 153810 162570 174100 125380 177500 128750 172600 189570 182490 118410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 605000000 5785 3177;751 5475 10917;10918 8804;8805 8804 2 9606 Homo sapiens -0.05091466180556381 EDQVIQLMNAIFSK Unmodified 1634.8338 0.83379288 1878 B2RE46;A0A994J5J1;P04844-2;P04844;B4DJL0;Q5JYR4;Q5JYR7 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 0 0 2 0 1 67.328 67.335 3 0.0046336 21729 20230619_1881_Aki_TMTPro18x_K_F2 73.022 58.332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5786 1878 5476 10919 8806 8806 1 9606 Homo sapiens 0.041769334975469974 EDRPGGHIVAETPR Unmodified 1532.7696 0.76955314 845 A0A087WXA3;A6NNA2 SRRM3 Serine/arginine repetitive matrix protein 3 yes no 0 0 1 3 0 1 30.426 30.519 4 7.4326E-05 5788 20230619_1882_Aki_TMTPro18x_K_F3 108.36 90.254 25691 18654 21361 23746 12545 15077 19231 19279 24116 25561 28684 27807 28668 24445 27182 29166 31628 29330 23706 17129 21939 23454 13936 16002 19170 19589 24469 25559 29207 28019 29191 25575 27922 29239 30202 27865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29731000 5787 845 5477 10920 8807 8807 1 9606 Homo sapiens 0.024479144556153187 EDRPITIK Unmodified 970.54475 0.54474515 2943 E9PQR7;Q548N1;Q9UK41;Q9UK41-2;E9PM90;A0A0S2Z5H5 VPS28 Vacuolar protein sorting-associated protein 28 homolog yes no 0 0 1 6 0 1 39.49 39.578 3 0.012104 9345 20230619_1886_Aki_TMTPro18x_K_F6 78.655 16.964 81692 56338 63073 76399 76886 93976 75283 81835 157260 92067 102520 132940 132790 120420 69635 166800 184720 177110 75321 51776 65916 75695 79025 93375 78469 84712 153190 93925 109160 132720 131800 127030 78801 167120 175570 168140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136290000 5788 2943 5478 10921 8808 8808 1 9606 Homo sapiens 0.0582945644322308 EDRYEEEIK Unmodified 1209.5513 0.55134667 3083;2862 P09493-3;D9YZV5;P09493-4;Q15657;P09493-10;A0A0K0K1I0;P09493-8;Q8TCG4;P09493-9;P09493;D9YZV4;Q6ZN40;A0A0S2Z4G6;P09493-6;C9IZA2;H0YL42;H7BYY1;B7Z596;F5H7S3;Q1ZYL5;P09493-2;B7Z722;D9YZV7;P09493-5;A0A494BZZ2;H0YKJ4;H0YK48;Q59GR8;A0A024R5W6;P09493-7;A0A994J554;A0A494C0V8 TPM1 Tropomyosin alpha-1 chain no no 0 0 1 1.5 0.5 1 1 39.904 39.939 3 0.03207 9759 20230619_1881_Aki_TMTPro18x_K_F2 60.167 39.737 223530 182220 211860 282280 460270 612160 494410 514860 769510 401560 401810 423160 512030 410370 369040 494890 480720 443520 206600 167610 220700 280800 460660 591130 504200 529150 752600 413490 434300 428400 512410 428220 384610 492740 458620 421930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 762420000 5789 2862;3083 5479 10922;10923 8809 8809 1 9606 Homo sapiens -0.04504695186733443 EDSAPPSSVAR Unmodified 1114.5255 0.52546627 2806 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;Q9BZE4-2;B4DHR2;Q9BZE4-3 GTPBP4 Nucleolar GTP-binding protein 1 yes no 0 0 0 1.5 0.5 1 1 32.216 32.246 2 7.542E-12 6573 20230619_1881_Aki_TMTPro18x_K_F2 200.11 181.38 32448 16951 38650 36271 49670 62100 36962 47717 44104 31464 40807 53175 49482 44568 38037 24498 56346 51667 29983 15700 38899 35337 50434 60436 38267 49267 44374 33355 42477 52634 49715 45211 39805 26515 53702 48803 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37229000 5790 2806 5480 10924;10925 8810;8811 8811 2 9606 Homo sapiens -0.02721544638325213 EDSAPSKPVVGIIYPPPEVR Unmodified 2149.1419 0.1419198 146 A0A024R1K8;Q15459;Q15459-2;F8WB66 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 1 7 0 1 55.336 55.397 3 4.8611E-11 15947 20230619_1887_Aki_TMTPro18x_K_F7 123.6 110.72 34427 28669 28496 33808 31605 38102 34466 37271 43102 44384 44796 48600 55575 48175 34308 64399 62246 69346 31792 26290 29524 33776 32713 38180 34859 38313 43513 44609 46349 49159 55406 50571 36971 64628 59335 65787 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74088000 5791 146 5481 10926 8812 8812 1 9606 Homo sapiens 0.11331451229443701 EDSAVFYELK Unmodified 1199.571 0.57101948 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 0 0 3.67 0.471 1 2 58.139 58.156 2;3 4.4234E-05 17675 20230619_1882_Aki_TMTPro18x_K_F3 166.19 116.06 113230 95958 105150 115190 105630 120870 126760 124700 131040 131410 135800 128300 142000 128790 128570 137190 136020 145410 104670 88004 107570 114840 110280 121880 126720 127310 133460 132360 139340 130440 144140 133270 131440 138180 130130 137990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46987000 5792 117 5482 10927;10928;10929 8813;8814 8813 2 9606 Homo sapiens -0.020783191759619513 EDSNLTLQEK Unmodified 1175.567 0.56699673 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4DNP4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 3 0 1 44.956 45.028 2 0.0037204 11841 20230619_1882_Aki_TMTPro18x_K_F3 96.143 46.642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5793 707 5483 10930 8815 8815 1 9606 Homo sapiens -0.013764086696937738 EDSQRPGAHLTVK Unmodified 1436.7372 0.73719038 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;A0A7I2YQX9;F8VZ49;Q32P51;A0A024QZ98;B4DP35;F8W646 HNRNPA1;HNRPA1;hCG_2020860;HNRNPA1L2;RP11-78J21.1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 1 6.22 1.31 1 2 2 2 2 34.26 34.311 3;4 0.00013947 7338 20230619_1886_Aki_TMTPro18x_K_F6 110.44 73.012 474660 372380 477320 525760 591290 626700 553540 554730 424460 548460 543650 611220 558700 421320 412710 578840 643720 650000 438810 342200 486630 519440 603510 624330 556570 571540 445260 556050 553220 610980 562610 449520 435900 582560 613710 616590 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 8801000000 5794 640 5484 10931;10932;10933;10934;10935;10936;10937;10938;10939 8816;8817;8818;8819 8817 4 9606 Homo sapiens 0.03629127052590775 EDSSSAEFLEK Unmodified 1240.5459 0.54592694 3862 Q59GU6;Q53HL9;Q53GY8;Q13596;Q13596-2;Q13596-3;H0YK42 SNX1 Sorting nexin-1 yes no 0 0 0 1 0 1 49.725 49.725 3 0.087491 14264 20230619_1880_Aki_TMTPro18x_K_F1 29.544 11.68 27068 26400 28849 24780 28347 30032 29691 32261 38025 27537 30426 28332 31548 26547 30212 33143 34409 32283 25073 24149 29123 25263 29517 30040 30125 32662 37929 28125 31611 28692 32106 27792 30991 33144 32867 30679 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35222000 5795 3862 5485 10940 8820 8820 1 9606 Homo sapiens -0.06472418769180877 EDSVKPGAHLTVK Unmodified 1379.7409 0.74087877 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;Q65ZQ3;P51991-2;B4DDB6;B4E3E6 HNRNPA3;D10S102;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 1 7.5 0.5 2 2 40.793 40.823 3;4 0.00044374 9581 20230619_1887_Aki_TMTPro18x_K_F7 94.287 63.059 359000 283410 348710 417680 439190 459870 420010 429480 328880 429580 500160 540190 441720 338340 403890 405590 468690 504970 331810 260570 356840 411070 448040 461040 422020 440940 347400 437030 502840 536230 450560 359460 414960 412060 448060 478440 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3493599999.9999995 5796 1469;2450 5486 10941;10942;10943;10944 8821;8822;8823;8824 8821 4 9606 Homo sapiens 0.06619796826453239 EDTEEHHLR Unmodified 1164.516 0.51596421 3491;640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;A0A7I2YQX9;F8VZ49;Q32P51;A0A024QZ98;A0A2R8Y4L2;F8VTQ5;A0A7I2V5U9;P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28;A0A087WUI2;I6L957;A0A7I2V4N0;A0A7I2YQN4 HNRNPA1;HNRPA1;hCG_2020860;HNRNPA1L2;RP11-78J21.1;HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoproteins A2/B1 no no 0 0 0 1 0 1 23.087 23.087 3 1.6462E-12 3765 20230619_1880_Aki_TMTPro18x_K_F1 229.55 179.51 1014400 307860 997960 1316900 1306700 1658000 1168600 1440000 1776500 1097000 1670700 2405900 1997000 1955400 1348400 912690 2863300 3135600 934150 291250 1021900 1248500 1332100 1642600 1205500 1477000 1768500 1168200 1737300 2363600 2000400 1978400 1463400 1059600 2726900 2953600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3311799999.9999995 5797 640;3491 5487 10945 8825 8825 1 9606 Homo sapiens -0.0597131292386166 EDTEEHHLRDYFEEYGK Unmodified 2195.9396 0.93959117 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28;A0A087WUI2;I6L957;A0A7I2V4N0;A0A7I2YQN4 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 1 2 0.816 2 2 2 49.021 49.069 3;4;5 2.2889E-13 13702 20230619_1882_Aki_TMTPro18x_K_F3 161.33 144.64 420550 323870 326020 379270 333230 381720 366460 428750 485760 465490 438260 541430 611570 537640 380100 1012600 878920 989560 388000 297060 339470 378590 347020 386910 371390 435590 486480 470830 459890 547050 608570 579710 421670 1006300 836890 939730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1881199999.9999998 5798 3491 5488 10946;10947;10948;10949;10950;10951 8826;8827;8828 8828 3 9606 Homo sapiens -0.11054103913920699 EDTEEHHLRDYFEQYGK Unmodified 2194.9556 0.95557559 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;A0A7I2YQX9;F8VZ49;Q32P51;A0A024QZ98;A0A2R8Y4L2;F8VTQ5;A0A7I2V5U9 HNRNPA1;HNRPA1;hCG_2020860;HNRNPA1L2;RP11-78J21.1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 1 3.14 1.25 1 1 2 2 1 48.579 48.633 3;5 5.5015E-09 13525 20230619_1882_Aki_TMTPro18x_K_F3 124.26 115.77 129500 121740 119260 122130 110100 116750 112990 126500 138780 131410 125760 130460 159580 130750 121930 234370 200790 218840 119780 111430 121860 123340 115200 118780 114640 128670 139460 132530 131120 132740 160100 140360 129640 232580 191470 207950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1396600000 5799 640 5489 10952;10953;10954;10955;10956;10957;10958 8829;8830 8829 2 9606 Homo sapiens -0.09410397677038418 EDTEEYNLR Unmodified 1167.5044 0.50439647 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;Q65ZQ3;P51991-2;B4DDB6;B4E3E6 HNRNPA3;D10S102;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 1 0 1 39.236 39.236 2 6.3026E-12 9693 20230619_1880_Aki_TMTPro18x_K_F1 228.45 216.24 334270 209360 291870 366590 368200 490890 352410 390140 607120 442230 514030 747550 705320 640430 419250 791990 903820 1026700 308320 193110 301720 358450 377300 484140 364010 406930 599980 453940 541270 741150 701140 672140 460160 805260 860940 972230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2459900000 5800 1469;2450 5490 10959 8831;8832;8833 8831 3 9606 Homo sapiens -0.07265554737864477 EDTEEYNLRDYFEK Unmodified 1849.8006 0.80063808 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;Q65ZQ3;P51991-2;B4DDB6;B4E3E6 HNRNPA3;D10S102;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 1 4 0.816 1 1 1 55.364 55.403 3 7.1217E-05 16378 20230619_1883_Aki_TMTPro18x_K_F4 98.676 78.026 372080 373200 339350 338910 342210 340430 345850 388980 417640 467300 432410 426180 533080 439300 411640 688530 640240 617880 344290 341260 347400 345530 355210 345670 350950 395930 422480 466730 447210 435520 535320 465930 434860 683000 610210 587690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 195660000 5801 1469;2450 5491 10960;10961;10962 8834;8835 8835 2 9606 Homo sapiens -0.09027021811493796 EDTESLEIFQNEVAR Unmodified 1778.8323 0.83227255 1425 A0A8I5KU76;A0A384MEE7;Q9BS26;A0A8I5KW59;A0A8I5KVZ0 ERP44 Endoplasmic reticulum resident protein 44 yes no 0 0 0 1.5 0.5 1 1 58.62 58.627 3 1.1951E-10 17929 20230619_1880_Aki_TMTPro18x_K_F1 155.17 138.1 98622 75838 98526 103710 74719 90979 95133 102430 100560 155610 141320 137300 168260 145290 140630 184440 164380 165650 91158 69672 99771 102280 80101 93203 95009 105250 104030 153770 144220 140530 169580 151670 145040 183540 157060 157530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 786490000 5802 1425 5492 10963;10964 8836;8837 8836 2 9606 Homo sapiens -0.025990290575464314 EDTLLLIGHLER Unmodified 1407.7722 0.7721789 4301 Q92621;B4DM61 NUP205 Nuclear pore complex protein Nup205 yes no 0 0 0 4.5 0.5 1 1 57.489 57.521 3 0.011132 16882 20230619_1885_Aki_TMTPro18x_K_F5 66.285 43.049 59710 53096 57083 54590 62039 66272 59186 57832 83250 67261 82204 78514 78830 71232 60742 76103 81443 86086 55222 48618 58257 55195 64006 65970 60591 59921 83339 67867 84179 78969 79746 73966 63314 76915 77756 81642 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 187380000 5803 4301 5493 10965;10966 8838;8839 8839 2 9606 Homo sapiens 0.08460369860540595 EDTQTLQSLQK Unmodified 1289.6463 0.64630969 2830 D3DVC4;P48681 NES Nestin yes no 0 0 0 3.5 0.5 1 1 46.888 46.949 3 1.8269E-06 12583 20230619_1883_Aki_TMTPro18x_K_F4 134.13 111.01 270160 194740 241280 232650 324050 262570 332030 328860 488500 385160 369560 360140 417820 301050 335180 465220 440950 402800 249410 178710 248630 232400 329840 265040 338910 332740 483880 385640 386680 364960 420780 321360 348830 460940 420620 383380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 937880000 5804 2830 5494 10967;10968 8840;8841 8841 2 9606 Homo sapiens 0.013072382844939057 EDTVQVSTLLRPPHCPR Unmodified 2004.0211 0.021093153 167 A0A024R1W3;Q96AY3;Q658U4;Q8NAG5;Q6ZME7;K7ESG6;K7ELI6 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10;Peptidyl-prolyl cis-trans isomerase yes no 0 0 1 8 0 2 46.094 46.132 3;4 1.8342E-13 11953 20230619_1888_Aki_TMTPro18x_K_F8 141.86 115.71 36266 27745 35704 38143 39733 43182 41267 38120 59827 46959 48753 47608 47770 42035 47184 49019 54123 54794 33517 25491 36392 37719 41022 43164 42074 39539 59417 47045 50489 48112 48781 43919 48383 49465 51722 51980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 407840000 5805 167 5495 10969;10970 8842;8843 8843 2 9606 Homo sapiens 0.059243450349640625 EDVAAYITR Unmodified 1036.5189 0.51892433 408 A0A024R6R2;Q8TD30-2;Q8TD30;H3BU54 GPT2 Alanine aminotransferase 2 yes no 0 0 0 4 0 1 48.852 48.89 2 0.016602 13484 20230619_1883_Aki_TMTPro18x_K_F4 73.196 44.115 58917 45298 64705 62206 50884 60726 54280 58986 62338 114730 133000 156130 148190 126870 109970 127230 152070 160030 54503 41617 65019 61415 54069 61473 54894 61881 66052 114110 133900 155490 148950 131870 114910 129650 145150 151620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34379000 5806 408 5496 10971 8844 8844 1 9606 Homo sapiens 0.00212562200931643 EDVEVAESPLR Unmodified 1242.6092 0.6091959 1845 Q99567;J3KMX1;A0A8V8TPS0;A0A8V8TPT0;A0A8V8TQB1;A0A8V8TQZ0;A0A8V8TQC3;A0A8V8TQC2;A0A8V8TQA5;B4DP20;B7Z5I6 NUP88 Nuclear pore complex protein Nup88 yes no 0 0 0 1 0 1 46.052 46.052 2 1.802E-08 12746 20230619_1880_Aki_TMTPro18x_K_F1 174.8 125.71 52065 41168 50598 56336 58559 63046 55864 61821 65622 64322 64119 60460 77363 50557 59030 74553 69030 68123 48121 37817 51671 55720 60126 63207 56807 63285 66276 64747 66393 61259 77567 53814 60984 74122 65944 64775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70523000 5807 1845 5497 10972 8845 8845 1 9606 Homo sapiens -0.002404332612968574 EDVFVHQTAIK Unmodified 1285.6667 0.6666512 3745 P67809;H0Y449;Q6PKI6;Q7KZ24;A0A024RAQ1;A0A384MDP4;B2RCC2;A0A024RAV4;P16989;Q59EB5;P16989-2;P16989-3;Q9Y2T7;Q96GD7;A0A0D9SEI8 YBX1;CSDA;YBX3;YBX2 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 3;Y-box-binding protein 2 yes no 0 0 0 5 0 1 46.223 46.3 3 0.00012363 12170 20230619_1885_Aki_TMTPro18x_K_F5 117.79 89.618 80043 62793 81355 105270 77151 109090 81541 87648 90273 96923 104580 125730 117750 106270 81833 151650 145440 190370 74005 57828 82636 102750 80781 109410 82293 91311 92090 98329 107300 125710 118170 112680 87760 153570 138850 180240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182330000 5808 3745 5498 10973 8846 8846 1 9606 Homo sapiens 0.035244537349626626 EDVLEQR Unmodified 887.43486 0.43486035 3267 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 0 0 0 1 0 1 38.805 38.805 2 0.030841 9560 20230619_1880_Aki_TMTPro18x_K_F1 94.874 33.313 124250 56221 80060 113320 90901 128690 92535 105640 156930 150580 154100 160740 170350 141820 91081 142190 213220 193970 114230 52067 85387 109770 94090 128260 95205 110690 156130 150140 158830 161970 169680 147040 101010 145620 202690 183760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82842000 5809 3267 5499 10974 8847 8847 1 9606 Homo sapiens -0.013359688959440064 EDVLSFIQMHR Unmodified 1373.6762 0.67617003 4223 Q8N1G2 CMTR1 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 yes yes 0 0 0 8 0 1 58.73 58.772 3 3.0466E-07 17301 20230619_1888_Aki_TMTPro18x_K_F8 167.6 128.33 17966 16550 18602 18559 21393 20470 17735 17599 22839 23252 25696 26241 25957 24313 25301 27375 28143 27937 16631 15164 18878 18608 21884 20505 18261 18332 23101 23294 26245 26439 26469 25294 25907 27488 26898 26529 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84406000 5810 4223 5500 10975 8848 8848 1 9606 Homo sapiens 0.004278987488078201 EDVLTLLLPVMGDSK Unmodified 1628.8695 0.86950968 3840 Q59EG8;Q13200;B4DM22;Q9NSM5;Q13200-3;Q13200-2;Q13041 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 7 0.816 1 1 1 66.548 66.577 3 2.6428E-06 20545 20230619_1888_Aki_TMTPro18x_K_F8 119.32 83.579 40434 29480 33317 43338 35779 51878 43615 45460 53327 47005 49106 55687 50182 46149 51168 56114 53884 60528 37309 27111 34554 42703 37309 51611 43815 46925 53588 47701 50682 55805 51259 48430 52194 56462 51576 57418 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 139950000 5811 3840 5501 10976;10977;10978 8849;8850;8851;8852 8852 4 9606 Homo sapiens 0.08022970954516495 EDVPEQGKDDVR Unmodified 1385.6423 0.64228694 4239 Q8N806;B2RDC9;E9PCJ7;Q05DA8;G3V336 UBR7 Putative E3 ubiquitin-protein ligase UBR7 yes no 0 0 1 1.5 0.5 1 1 36.492 36.521 3 0.000174 8311 20230619_1881_Aki_TMTPro18x_K_F2 107.39 89.47 108370 68446 88902 113370 112860 141730 109250 116470 190600 128420 150030 165300 183670 155340 108060 149720 219030 192020 99911 63083 92456 111040 115590 140470 112820 121050 187750 130460 157270 165750 182920 160320 117530 152790 208310 182030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100400000 5812 4239 5502 10979;10980 8853;8854 8854 2 9606 Homo sapiens -0.03510851209262 EDVTFEDHPLNPNPDSR Unmodified 1980.8813 0.88134801 508 A0A024R8B1;B4DHM6;Q59F95;A0A024R8C8;Q9NVG8-2;Q9NVG8 TBC1D13 TBC1 domain family member 13 yes no 0 0 0 1 0 1 45.298 45.298 3 5.1095E-30 12433 20230619_1880_Aki_TMTPro18x_K_F1 191.93 175.24 22015 17092 21229 21342 21926 26472 21086 20436 32797 19522 19340 22929 21463 19315 21418 22720 27191 23745 20345 15687 21642 21268 22741 26234 21663 21276 32176 19918 20594 22992 21859 20217 22103 22832 25936 22554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37176000 5813 508 5503 10981 8855 8855 1 9606 Homo sapiens -0.06985740768573123 EDYVGGQSHR Unmodified 1146.5054 0.50539953 1366 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8;B4DZQ0 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 0 0 0 2 0 1 28.75 28.822 3 0.00057447 5265 20230619_1881_Aki_TMTPro18x_K_F2 97.456 84.103 5739.4 4208.6 5281.3 6309 9114.3 11452 6788.9 7057.2 9220.1 5394.3 10800 8932.1 6411.9 7431.4 5934.3 5698.3 9211.3 8814.9 5300.1 3871.3 5468.4 6257.1 9118.5 11081 7054.9 7467.4 9294.1 5660.2 10798 8864 6675.9 7616.3 6222.4 5930.7 8778.8 8340.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15644000 5814 1366 5504 10982 8856 8856 1 9606 Homo sapiens -0.06199295578267083 EEAADLSSLK Unmodified 1061.5241 0.52406928 4423 Q9BRX8-2;Q9BRX8 FAM213A Redox-regulatory protein FAM213A yes no 0 0 0 2.5 0.5 1 1 50.197 50.261 2 1.4699E-06 14263 20230619_1882_Aki_TMTPro18x_K_F3 193.82 96.754 222710 195930 220730 205420 245710 253340 272080 281080 346870 316090 323920 308080 348500 254820 265820 395670 360500 339350 206010 179440 224680 207500 253910 253300 275100 286020 348180 317340 334270 311570 350800 272180 277700 391770 343860 322990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190070000 5815 4423 5505 10983;10984 8857;8858 8858 2 9606 Homo sapiens -0.004231787271010035 EEAAEYAK Unmodified 909.40798 0.40797689 1910 Q96DV6;A2A3R6;P62753;A2A3R5 RPS6 40S ribosomal protein S6 yes no 0 0 0 2 0 1 39.752 39.822 2 0.0177 9734 20230619_1881_Aki_TMTPro18x_K_F2 91.069 60.456 37339 25043 52345 52630 57931 70577 53305 64163 65993 45645 52659 70731 59633 65902 40650 42575 103710 96019 34603 23158 52019 51066 59638 69777 54440 65469 65928 47926 55059 70417 59927 66911 45145 46141 98562 90662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37926000 5816 1910 5506 10985 8859 8859 1 9606 Homo sapiens -0.05035077507147889 EEADRYQR Unmodified 1065.4839 0.4839358 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;Q6MZR8;A8K7A6;Q68EN4;Q5H934 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 1 1 0 1 26.322 26.322 3 0.01358 4617 20230619_1880_Aki_TMTPro18x_K_F1 75.213 62.586 6326.2 4115.8 7400 5074.1 13004 8970.2 5531.7 8760.6 7038.2 4227.7 8228 6990.8 5366.3 6084.6 8862.9 3692.5 7277.9 5109.1 5850.4 3779.7 7487.1 5102.3 12822 8782.8 6071.7 8829.9 7124.1 4601.8 8257.6 6946.7 5741.3 6172.2 8833.7 3847.7 6963.7 4845.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1234600 5817 1432 5507 10986 8860 8860 1 9606 Homo sapiens -0.046186806070181774 EEAENTLQSFR Unmodified 1322.6103 0.61025853 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 0 0 2.5 1.12 1 1 1 1 46.676 46.726 2 3.2934000000000005E-30 12884 20230619_1881_Aki_TMTPro18x_K_F2 267.29 215.06 882060 592650 649060 675600 1364500 1841200 1237700 1156900 1647500 1431600 1442700 1623600 1606700 1427700 1338500 1544200 1447200 1579100 812920 543770 690380 690090 1361300 1756500 1266500 1235400 1647100 1439300 1498000 1632000 1622400 1485000 1373000 1551400 1384600 1499000 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 6883299999.999999 5818 3414 5508 10987;10988;10989;10990 8861;8862;8863;8864 8862 4 9606 Homo sapiens -0.03814218892398458 EEAERLEK Unmodified 1002.4982 0.49818889 2184 P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;P35241-2 RDX Radixin yes no 0 0 1 2 0 1 36.348 36.406 3 0.052173 8264 20230619_1881_Aki_TMTPro18x_K_F2 61.679 22.903 40735 26197 56341 54999 67018 62568 51446 66819 60261 52809 80039 76257 61882 59063 57441 38425 82804 70775 37735 24229 56064 53238 68229 62764 53131 67557 61619 54816 80353 75741 63575 60405 59772 40830 78898 66924 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44140000 5819 2184 5509 10991 8865 8865 1 9606 Homo sapiens -0.0029602817870681974 EEAETPAEATGKPQR Unmodified 1612.7693 0.76927837 2595 B4DUT2;A0A024R7C4;A0A494C108;Q8N9T8 FLJ12949;KRI1 Protein KRI1 homolog yes no 0 0 1 2 0 1 35.376 35.433 3 6.9427E-14 7845 20230619_1881_Aki_TMTPro18x_K_F2 153.94 140.22 40104 22734 37212 44653 50630 63449 42821 48127 65224 50210 36678 39393 69527 50099 39456 50373 74153 57758 36990 21017 38295 43474 51432 62318 44306 50248 64078 50374 40397 40834 68480 51414 42609 50998 70500 54840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32704000 5820 2595 5510 10992 8866 8866 1 9606 Homo sapiens -0.012595500549196004 EEAGAQGRPLR Unmodified 1182.6105 0.6105333 722 A0A1U9X8D3;A0A1U9X8D1;A0A1U9X8C7;A0A1U9X8C1;A0A0G2JHC2;A0A024RCJ8;Q6NYC8;Q6NYC8-3 hCG_1821276;PPP1R18 Phostensin yes no 0 0 1 3 0 1 23.18 23.332 3 0.0014418 3842 20230619_1882_Aki_TMTPro18x_K_F3 93.096 51.593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5821 722 5511 10993 8867 8867 1 9606 Homo sapiens 0.026532456181257658 EEAGGEAAAAAAAER Unmodified 1372.6219 0.62188585 1061 A0A0S2Q0B1;O14497;O14497-2 ARID1A AT-rich interactive domain-containing protein 1A yes no 0 0 0 1 0 1 38.38 38.38 2 9.6689E-11 9356 20230619_1880_Aki_TMTPro18x_K_F1 166.6 102.31 42763 33531 39422 46277 48652 55309 47434 45912 61658 57998 60488 68085 62678 59126 48493 65525 73144 72668 39506 30806 40506 45778 49817 55016 48328 47885 61967 58297 62240 68326 63293 61602 51013 66095 69743 68947 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62834000 5822 1061 5512 10994 8868 8868 1 9606 Homo sapiens -0.04952021869053169 EEAGGGISEEEAAQYDR Unmodified 1809.7653 0.7653152 107 A0A024R0R4;Q9UBE0;M0QZS6;B3KNJ4;Q9UBE0-2;Q9UBE0-3;A0A590UK93;A0A590UKC5;M0R375 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes no 0 0 0 1 0 1 42.674 42.674 3 0.0065285 11329 20230619_1880_Aki_TMTPro18x_K_F1 66.106 64.226 68984 52404 79818 80275 100460 112060 99505 100200 120650 90101 118130 109540 106680 85725 106990 86753 108280 126790 63842 48210 80507 79157 102690 110580 101030 102890 121470 92246 120770 109540 109210 89348 108750 89463 103720 119940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 350750000 5823 107 5513 10995 8869 8869 1 9606 Homo sapiens -0.10717684339238076 EEAIEHNYGGHDDDLSVR Unmodified 2054.893 0.89297533 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8;F5H2X1;B7Z842 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 1 0 1 39.406 39.406 4 7.235E-60 9807 20230619_1880_Aki_TMTPro18x_K_F1 308.27 291.96 60409 37334 48676 59537 52377 59719 52641 56546 64603 72726 72091 85918 85416 72317 54868 102570 100760 116340 55683 34395 50540 58259 54185 60272 53456 58426 65501 73017 74247 86162 85352 76664 59133 103180 96075 110290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218150000 5824 1601 5514 10996 8870 8870 1 9606 Homo sapiens -0.09227543745282674 EEAPDILCLQETK Unmodified 1544.7392 0.73922379 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1;G3V3C7;A0A0C4DGK8;H7C4A8;G3V5M0;G3V359;G3V5D9 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 0 2.86 1.25 1 2 2 1 1 57.514 57.537 2;3 1.3669E-27 17413 20230619_1882_Aki_TMTPro18x_K_F3 296.75 230.45 725050 564540 594010 721940 588030 744270 691510 740860 944140 778800 763950 961150 1091700 952580 680100 1288500 1208800 1359800 669230 518240 615110 716280 615580 750530 699010 758160 940250 791100 807470 967560 1085200 1000600 731380 1291300 1152500 1290300 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 2959199999.9999995 5825 3515 5515 10997;10998;10999;11000;11001;11002;11003 8871;8872;8873;8874;8875 8873 5 9606 Homo sapiens -0.011356250444805482 EEAQAEIEQYR Unmodified 1364.6208 0.62082322 502 A0A024R883;O75348;A0A7I2V4K4;A0A7I2V3Q6;A0A7I2V375 ATP6V1G1 V-type proton ATPase subunit G 1 yes no 0 0 0 1.5 0.5 1 1 43.756 43.798 2 3.4167E-13 11772 20230619_1880_Aki_TMTPro18x_K_F1 217.78 190.45 293510 221640 250070 261830 225290 277040 267200 263850 313120 384670 387660 407240 422560 351130 313740 455500 441870 437940 270940 203320 257360 261370 237490 278680 268520 273710 319690 382850 395740 410470 425030 369570 328800 454640 421510 416160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 453350000 5826 502 5516 11004;11005 8876;8877 8876 2 9606 Homo sapiens -0.04690236237956924 EEAQMEVEQYR Unmodified 1410.6085 0.60854397 2957 F2Z307;O95670;Q6NVJ2;H0Y474 ATP6V1G2-DDX39B;ATP6V1G2 V-type proton ATPase subunit G 2 yes no 0 0 0 1 0 1 43.322 43.322 2 3.8728E-05 11575 20230619_1880_Aki_TMTPro18x_K_F1 143.24 93.871 16861 14216 19745 25156 21007 20072 22105 22813 28766 20548 29279 33324 25230 23112 29759 23678 32070 37232 15616 13098 19866 24418 21726 20738 22434 23075 28902 21282 29874 32890 26107 24212 30276 24561 30697 35200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15087000 5827 2957 5517 11006 8878 8878 1 9606 Homo sapiens -0.08033595972642615 EEAQPIVTK Unmodified 1013.5393 0.53932542 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 3.67 0.471 1 2 42.525 42.579 2 4.9275E-05 10727 20230619_1882_Aki_TMTPro18x_K_F3 163.88 110.41 66399 28981 64186 85650 94817 134130 83169 107540 130380 86450 111150 169940 130440 129140 94327 71283 169200 176460 61202 27049 66017 82292 96086 131120 86004 111080 129240 91122 116130 167020 131010 131520 100540 78537 161220 166470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94077000 5828 3957 5518 11007;11008;11009 8879;8880 8879 2 9606 Homo sapiens 0.03309732860770964 EEAQSLEDLAGFK Unmodified 1435.6831 0.68308912 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 3.5 0.5 1 1 61.386 61.402 3 2.0766E-05 18968 20230619_1882_Aki_TMTPro18x_K_F3 118.24 102.67 121720 90724 102800 119950 87041 108400 101950 113550 128760 132310 118000 103060 140710 110950 108320 136990 111610 111380 112340 83327 105870 118560 92250 110570 102820 116130 129310 131830 122430 106280 141280 115600 111060 135740 106750 106060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127090000 5829 3588 5519 11010;11011 8881 8881 1 9606 Homo sapiens -0.01732509889643552 EEASDYLELDTIK Unmodified 1524.7195 0.71953421 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;A0A7P0TBC2;Q96GW1 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 3 0.816 1 1 1 59.93 59.951 2;3 8.8636E-36 18622 20230619_1881_Aki_TMTPro18x_K_F2 312.65 276.07 135680 98656 114150 146110 117900 190360 143900 159630 213500 197680 201320 277770 274940 255210 199090 319900 296830 392110 125200 90739 118080 144100 123530 188200 145730 166190 213110 200280 210780 277520 274950 267400 209880 324040 283720 371310 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 113910000 5830 3452 5520 11012;11013;11014 8882;8883;8884;8885 8883 4 9606 Homo sapiens -0.0218367778359152 EEASGSSVTAEEAK Unmodified 1393.6209 0.6208828 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 1.5 0.5 1 1 38.45 38.481 2 3.5919999999999996E-28 9408 20230619_1880_Aki_TMTPro18x_K_F1 244.95 207.39 22067 14512 31766 28590 46908 61434 35895 47815 41093 33009 51894 68220 43979 50535 49232 21291 62119 60155 20454 13406 31683 28114 47287 59248 37032 49341 41954 35229 52511 66949 45480 51136 50519 24144 59297 56731 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72650000 5831 3444 5521 11015;11016 8886 8886 1 9606 Homo sapiens -0.06018281028605088 EEASGSSVTAEEAKK Unmodified 1521.7158 0.71584581 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 1 3 0.707 1 2 1 38.602 38.657 3 7.7786E-14 8988 20230619_1883_Aki_TMTPro18x_K_F4 171.76 130.71 40123 24298 54473 50164 79751 97425 61468 79190 67443 49022 82439 96104 68652 71044 79005 31834 87118 78208 37150 22473 54508 49099 80387 94411 63285 81277 68868 52606 83389 94471 71073 72010 80329 35390 83214 73824 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 385410000 5832 3444 5522 11017;11018;11019;11020 8887;8888 8888 2 9606 Homo sapiens -0.024143475574192053 EEASNFR Unmodified 851.37735 0.37734547 1225 Q6IB71;A0A140VK43;P25788-2;P25788;G3V4X5 PSMA3 Proteasome subunit alpha type;Proteasome subunit alpha type-3 yes no 0 0 0 1 0 1 32.853 32.853 2 0.0045027 7113 20230619_1880_Aki_TMTPro18x_K_F1 147.83 104.83 53234 25112 63452 63752 85853 112460 64223 86198 238140 58644 75547 90956 84717 72279 84209 35450 91416 92666 49172 23348 63959 61743 87331 109270 71243 89049 225640 62171 85592 90112 86234 73297 85753 39586 87406 87404 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57107000 5833 1225 5523 11021 8889 8889 1 9606 Homo sapiens -0.05428811101523934 EEAVAEVVTITK Unmodified 1287.6922 0.69219725 1958 E7ESP9;A5YM63;P07197;P07197-2 NEFM Neurofilament medium polypeptide yes no 0 0 0 4 0.816 1 1 1 57.716 57.748 3 0.00012941 17407 20230619_1883_Aki_TMTPro18x_K_F4 92.925 63.236 49540 41270 47680 45528 39020 50714 42292 37099 53784 46741 62424 87186 65649 71248 57660 76484 92281 125850 45799 37822 48447 45709 41390 50577 42829 39154 54443 47982 63942 86078 66667 74278 60797 79457 88192 118890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148930000 5834 1958 5524 11022;11023;11024 8890 8890 1 9606 Homo sapiens 0.05985883466701125 EEAWVIGSVVAR Unmodified 1314.6932 0.6932003 3488 Q3B7A7;Q59HH3;P22102;B4DJ93;A0A140TA71 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 5.5 0.5 1 1 59.229 59.289 3 2.113E-05 17834 20230619_1886_Aki_TMTPro18x_K_F6 97.779 76.877 24528 21040 24388 24700 25533 29757 24634 29448 32313 35865 32093 36857 39424 35101 31199 42519 39581 52238 22686 19291 24804 24717 26433 29699 25147 30255 32515 35929 33283 37302 39633 36671 32400 43111 37878 49467 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104080000 5835 3488 5525 11025;11026 8891 8891 1 9606 Homo sapiens 0.04844142626257053 EEAYNSLMK Oxidation (M) 1099.4856 0.48557529 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HHY9;A0A804HJA1;A0A804HLL8 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 1 0 5 0 1 44.327 44.406 2 0.03158 11376 20230619_1885_Aki_TMTPro18x_K_F5 85.064 57.539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5836 1723 5526 11027 8892 8892 1126 1 9606 Homo sapiens -0.060188076332678975 EECPAVR Unmodified 859.3858 0.38580166 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;Q96C96 P4HB Protein disulfide-isomerase yes no 0 0 0 1 0 1 30.629 30.629 2 0.0066578 6198 20230619_1880_Aki_TMTPro18x_K_F1 131.3 80.762 38629 19967 44367 47306 66317 72166 55645 70581 67663 38017 65054 96040 60124 68357 63898 33670 100070 104680 35681 18529 44942 45798 66853 70979 57123 71308 68016 41952 66875 93780 61861 69578 66727 38465 95431 98661 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42950000 5837 537 5527 11028 8893 8893 1 9606 Homo sapiens -0.049515804565544386 EECPVFTPPGGETLDQVK Unmodified 2001.9354 0.93535742 4570 Q9NQ88 TIGAR Fructose-2,6-bisphosphatase TIGAR no no 0 0 0 3 0 1 57.748 57.781 3 0.031544 17532 20230619_1882_Aki_TMTPro18x_K_F3 46.131 37.13 19516 19634 21534 23497 16910 22391 21828 20632 28920 21081 22623 23164 25832 23336 24120 25990 25548 28565 18087 17995 21654 23398 18098 22679 21942 21225 28782 21368 23652 23435 26194 24205 24646 26214 24451 27093 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7333000 5838 4570 5528 11029 8894 8894 1 9606 Homo sapiens -0.025532846612577487 EEDGSLSLDGADSTGVVAK Unmodified 1848.8589 0.85888124 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 2.5 0.5 1 1 53.192 53.238 3 2.2451E-20 15874 20230619_1881_Aki_TMTPro18x_K_F2 191.93 159.65 30194 21138 23060 29892 23904 36398 28509 29321 45858 40175 42435 54497 56346 54086 31679 71203 66025 101610 27840 19434 24086 29528 25020 36115 29005 30738 45591 40492 44350 54675 55980 56729 34774 72827 63086 96057 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158610000 5839 2263 5529 11030;11031 8895 8895 1 9606 Homo sapiens -0.031593849568935184 EEDPATGTGDPPR Unmodified 1340.5844 0.58443771 1213 A0A140VJZ1;P45974-2;P45974;F5H571 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 1 0 1 33.575 33.575 2 1.8871E-10 7365 20230619_1880_Aki_TMTPro18x_K_F1 218.11 184.22 45495 25649 42946 46717 60111 67741 59666 55551 67615 56187 70640 63039 60679 50085 61590 24711 54489 47179 41966 23685 44129 45674 61089 66580 60408 57607 68494 56987 71851 63184 62251 50791 62009 26637 52153 44599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58222000 5840 1213 5530 11032 8896 8896 1 9606 Homo sapiens -0.07223113134682535 EEDRPPLR Unmodified 1010.5145 0.51450765 3646 P53618 COPB1 Coatomer subunit beta yes yes 0 0 1 1.5 0.5 1 1 29.913 29.948 3 0.00030734 5947 20230619_1880_Aki_TMTPro18x_K_F1 144.09 92.743 85954 82742 86660 90225 110490 114050 101770 103040 142940 108440 118380 110060 121900 106050 103400 122880 140170 128210 79572 75782 88344 90841 112660 113320 104360 106140 142210 109450 122680 111590 123490 110420 107600 123460 133670 121770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123450000 5841 3646 5531 11033;11034 8897;8898 8897 2 9606 Homo sapiens 0.009670977780501744 EEECHFYAGGQVYPGEASR Unmodified 2184.9171 0.91708159 3838 V9HW63;Q13162;A6NG45 HEL-S-97n;PRDX4 Peroxiredoxin-4 yes no 0 0 0 2 0 1 43.725 43.807 3 2.923E-17 11585 20230619_1881_Aki_TMTPro18x_K_F2 165.66 158.61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5842 3838 5532 11035 8899 8899 1 9606 Homo sapiens -0.12798026583277533 EEEDNPKGEGTEQEPSTTPEADDDGRR Unmodified 2987.25 0.25003887 2834 D3DWL9;Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes no 0 0 2 1 0 1 35.391 35.391 4 9.9112E-14 8152 20230619_1880_Aki_TMTPro18x_K_F1 134.28 123.02 21551 13224 16652 17282 18383 22407 17346 19273 22788 21459 23666 22024 22651 22633 21981 26250 25804 25417 19859 12155 17353 17184 18971 22189 17727 19955 22939 21597 24183 22369 23145 23501 22599 26263 24649 24151 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31918000 5843 2834 5533 11036 8900 8900 1 9606 Homo sapiens -0.16409615087832208 EEEEFNTGPLSVLTQSVK Unmodified 2005.9844 0.9844161 3719 P62316;P62316-2;K7ERG4 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 0 0 0 5.25 0.829 1 1 2 63.305 63.339 3 9.7982E-14 19692 20230619_1883_Aki_TMTPro18x_K_F4 152.89 136.09 79147 77845 83428 92326 89072 103120 89906 102480 98995 97603 104930 103380 114360 96212 105180 115400 100360 115210 73310 71348 84535 92199 92124 103440 90943 104570 100600 99070 107790 104490 115960 100500 106910 115620 96169 109370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 502220000 5844 3719 5534 11037;11038;11039;11040 8901;8902;8903 8901 3 9606 Homo sapiens 0.021663268993961537 EEEFLTNELSR Unmodified 1365.6412 0.64122431 41 Q05CP8;A0A024QZJ7;Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes no 0 0 0 1 0 1 53.851 53.851 2 1.6757E-07 15960 20230619_1880_Aki_TMTPro18x_K_F1 169.65 141.64 42236 29261 36649 42704 32037 55292 39483 50275 68227 55995 63048 72953 79090 73610 42856 91724 91987 106410 38974 26914 37685 42161 34075 54766 40286 51826 67631 56847 65635 73351 78593 76853 47202 92539 87638 100860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23535000 5845 41 5535 11041 8904 8904 1 9606 Homo sapiens -0.026970655781497044 EEEGLQLR Unmodified 972.48762 0.4876242 3632 Q5BKZ2;P52294;C9JYI4;C9J352;C9JWD9;F2Z3G4;C9J4U1 KPNA1 Importin subunit alpha;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes no 0 0 0 1 0 1 40.928 40.928 2 0.0019506 10502 20230619_1880_Aki_TMTPro18x_K_F1 149.4 0 52287 39184 49571 50800 54009 63368 48632 57463 77998 69588 67026 67458 76723 60675 58153 81172 79421 79779 48302 35981 50652 50509 55703 62974 50277 59396 77371 69644 69679 68366 77110 63921 60761 81088 75786 75788 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48041000 5846 3632 5536 11042 8905 8905 1 9606 Homo sapiens 0.0002798916685833319 EEEGTGVVHQAPYFGAEDYR Unmodified 2252.9974 0.9974404 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;A0A804HK69;A0A804HKU1;A0A804HIG2 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 2 0.816 1 1 1 47.097 47.149 3 3.5339E-31 12830 20230619_1882_Aki_TMTPro18x_K_F3 218.05 213.89 189110 162660 174700 185760 176070 208180 202750 206630 256880 253710 247720 332950 358750 329090 199720 450180 415080 459500 174810 149100 178780 186050 183710 208780 204570 212470 258430 256370 259830 334360 355500 345850 219170 450130 395370 436170 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 593300000 5847 1736 5537 11043;11044;11045 8906;8907;8908 8908 3 9606 Homo sapiens -0.07893841988516215 EEEGVKYER Unmodified 1137.5302 0.53021729 4263 Q8TB45-2;Q8TB45 DEPTOR DEP domain-containing mTOR-interacting protein yes no 0 0 1 2 0 1 34.504 34.56 3 0.015873 7514 20230619_1881_Aki_TMTPro18x_K_F2 68.657 29.035 19163 11530 19780 23231 47016 45919 38937 41828 32897 19301 30458 27009 21576 18179 35122 11614 19878 16152 17695 10660 20476 22766 46389 44596 39521 42378 33705 20955 30986 26779 22924 18696 34502 12114 19141 15307 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15179000 5848 4263 5538 11046 8909 8909 1 9606 Homo sapiens -0.03304660495587086 EEEIAALVIDNGSGMCK Acetyl (Protein N-term);Oxidation (M) 1892.8496 0.84957888 3112;3167 P63261;I3L4N8;B4E3A4;A0A804GS07;B4DVQ0;I3L3I0;I3L1U9;J3KT65;I3L3R2;A0A7P0TBL1;K7EM38 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 1 1 0 2 0.816 1 1 1 64.018 64.031 2;3 3.2174E-23 20740 20230619_1881_Aki_TMTPro18x_K_F2 105.03 88.894 184950 135080 170650 168160 250630 226080 214350 229120 214330 197060 200150 186760 208560 180740 198840 213720 174340 212510 170790 124000 175670 167910 252620 224390 218250 232870 217870 200560 206340 189990 212110 188390 201110 214140 167300 201710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 586780000 5849 3112;3167 5539 11047;11048;11049 8910;8911 8910 1807 2 9606 Homo sapiens -0.061131928383929335 EEEIAALVIDNGSGMCK Acetyl (Protein N-term) 1876.8547 0.85466426 3112;3167 P63261;I3L4N8;B4E3A4;A0A804GS07;B4DVQ0;I3L3I0;I3L1U9;J3KT65;I3L3R2;A0A7P0TBL1;K7EM38 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 1 0 0 3.14 1.25 1 1 2 2 1 65.805 65.825 2;3 1.7134000000000001E-71 21137 20230619_1881_Aki_TMTPro18x_K_F2 191.53 175.27 420770 304090 409410 432880 394610 520190 488280 529780 554670 520550 441290 471290 582080 497500 507740 533290 498080 582300 388710 279560 416920 427630 414290 519200 488990 540040 557040 525180 464530 481480 586090 514390 517230 538030 477240 552250 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1607099999.9999998 5850 3112;3167 5539 11050;11051;11052;11053;11054;11055;11056 8912;8913;8914;8915;8916 8912 5 9606 Homo sapiens -0.048688889757841025 EEEIEVDSR Unmodified 1104.4935 0.49349744 3905 Q14978-3;B2RAU8;A0A0A0MRM9;Q14978;Q14978-2;Q96J17 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 0 0 0 1 0 1 38.81 38.81 2 0.08371 9603 20230619_1880_Aki_TMTPro18x_K_F1 61.691 40.79 34504 23862 33678 38720 34115 43516 41897 42171 47586 44671 50091 57700 55968 54530 45705 62140 67163 61178 31868 21978 34330 37918 35659 43570 41970 43247 48245 45419 51577 57881 56519 56710 47927 62224 64013 58139 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34094000 5851 3905 5540 11057 8917 8917 1 9606 Homo sapiens -0.05456957112141936 EEELRKEEER Unmodified 1345.6474 0.64737232 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;B3KSQ7 DBN1 Drebrin yes no 0 0 2 1.5 0.5 1 1 33.403 33.432 4 0.0019366 7336 20230619_1880_Aki_TMTPro18x_K_F1 92.866 54.871 58875 39546 66742 63708 88004 79697 77737 64666 74000 60170 81745 62741 60717 49815 91987 28892 55988 36074 54439 36424 67426 62527 89265 79046 78847 67022 75836 61161 82523 63132 64049 50723 90642 30003 53779 34260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52047000 5852 1396 5541 11058;11059 8918 8918 1 9606 Homo sapiens -0.011625473466210678 EEEMGEEEEVER Oxidation (M) 1509.5777 0.57769735 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YDJ9;A0A2R8YDW2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y5M9;A0A2R8YE38 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 1 0 1 0 1 34.064 34.064 2 0.0075732 7621 20230619_1880_Aki_TMTPro18x_K_F1 72.434 63.853 6722.6 3821.2 6607.9 7895.2 5688.9 10887 7770.4 8100.1 12531 8200.8 10077 11914 9702.3 10334 7668.1 6288 11327 13449 6203.5 3535.4 6722.7 7665.5 6083.7 10697 7858.7 8470.8 12378 8408.6 10446 11857 9835.8 10498 8027.3 6790.2 10817 12690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13778000 5853 1005 5542 11060 8919 8919 567 1 9606 Homo sapiens -0.1567083886823184 EEEMMIR Oxidation (M) 952.3994 0.39940282 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 1 0 1 0 1 36.641 36.641 2 0.036301 8633 20230619_1880_Aki_TMTPro18x_K_F1 87.284 77.696 112490 83498 103470 120290 128380 147510 126720 123500 150260 120250 136700 133840 144300 120160 125960 144610 152650 143940 103880 76766 106340 118730 131430 146490 128570 127760 151120 122200 141200 134860 146180 125700 129980 144840 145740 136750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93612000 5854 1450 5543 11061 8920 8920 943 1 9606 Homo sapiens -0.07870090739606894 EEEMMIR Unmodified 936.40449 0.4044882 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 1 0 1 42.565 42.565 2 0.020277 11211 20230619_1880_Aki_TMTPro18x_K_F1 104.8 79.062 156340 121500 150320 152280 154300 193250 180520 171980 198210 180270 184450 200060 211400 164390 166330 203120 222720 188520 144470 111510 153320 151790 160860 191740 181020 177390 200370 182380 191150 200960 212710 172830 173220 202580 212320 179340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161060000 5855 1450 5543 11062 8921 8921 1 9606 Homo sapiens -0.06625786876986695 EEENASVIDSAELQAYPALVVEK Unmodified 2503.233 0.23297923 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 3 0 1 62.782 62.812 3 1.5197E-13 19600 20230619_1882_Aki_TMTPro18x_K_F3 137.45 125.66 9688.8 9854.4 11665 10094 7913.6 13382 12411 13117 17114 13489 14167 17793 16040 15677 12308 22374 17320 23086 8987.7 9019.1 11627 10227 8676.1 13268 12400 13424 17036 13751 14776 17802 16156 16583 12916 22381 16563 21899 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16688000 5856 3758 5544 11063 8922 8922 1 9606 Homo sapiens 0.04149205625617469 EEERQEALR Unmodified 1158.5629 0.56291441 4131 Q6PUV4;D6RGY3;D6R960;D6RI05;D6RBA5;D6RAG3;D6RI11;B4DEW3;O14810 CPLX2;CPLX1 Complexin-2;Complexin-1 yes no 0 0 1 1 0 1 27.943 27.943 3 4.4105E-06 5170 20230619_1880_Aki_TMTPro18x_K_F1 170.47 120.76 34023 14350 31359 12917 2032.7 1840.9 7450.8 8907 9853.7 31204 45484 71082 54928 56847 33433 32750 89209 87841 31344 13177 31503 13084 4591.8 2891.4 7364.6 9236.9 11375 31503 45544 69720 54853 57848 37436 36381 84806 82853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61795000 5857 4131 5545 11064 8923 8923 1 9606 Homo sapiens -0.010024533727346352 EEEVHQMR Oxidation (M) 1072.4608 0.46075752 2510 B4DK97;Q5T655 CFAP58 Cilia- and flagella-associated protein 58 yes no 0 1 0 1 0 1 28.065 28.065 3 0.05541 5227 20230619_1880_Aki_TMTPro18x_K_F1 45.081 23.618 9253.9 4255.6 8464.2 10767 14520 12613 9498.4 16589 15417 9515.9 12947 16440 13072 12134 13923 6489.9 16135 15915 8527.4 3957 8762.3 10351 14456 12697 10065 16462 15255 10206 13430 16209 13387 12365 14222 7165.7 15415 15017 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5054100 5858 2510 5546 11065 8924 8924 1536 1 9606 Homo sapiens -0.07257442715990692 EEEVTGPVIAPLFPQK Unmodified 1752.9298 0.92980175 3312 O75643;A4FU77;B4E150;Q9UNV9;A2RRQ7;Q7L5W4;Q9P172 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 5.5 0.5 1 1 62.167 62.217 3 0.00027321 19106 20230619_1886_Aki_TMTPro18x_K_F6 87.083 68.487 149710 121400 164710 167000 126590 175950 154970 164890 182240 174480 172840 181910 155040 153370 179410 171890 164850 202580 138540 111510 165550 165000 135550 176860 155560 169470 183720 176060 177120 183310 160090 160090 181180 174180 158130 191950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 226230000 5859 3312 5547 11066;11067 8925;8926 8926 2 9606 Homo sapiens 0.08345404609281104 EEFASTCPDDEEIELAYEQVAK Unmodified 2572.1163 0.11629449 1305 A0A1U9X8Y4;Q5SRT3;Q53FB0;O00299 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 yes no 0 0 0 2 0.816 1 1 1 62.722 62.735 3 9.9419E-13 19580 20230619_1882_Aki_TMTPro18x_K_F3 140.95 133.84 44756 39683 51848 43619 28459 26583 35288 40384 39073 60153 54683 49462 64588 58624 49570 58775 46884 58226 41460 36358 51658 43562 31540 28532 35383 40827 40315 59369 55754 51010 64893 60176 50578 59013 44962 55268 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 696810000 5860 1305 5548 11068;11069;11070 8927 8927 1 9606 Homo sapiens -0.10687900656421334 EEFEHQQK Unmodified 1073.4778 0.47778779 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96BE0;E9PS65;Q96H53;E9PM13;Q9NZ87;Q9NWW3 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 0 0 1.5 0.5 1 1 34.446 34.475 3 0.00055814 7448 20230619_1881_Aki_TMTPro18x_K_F2 117.89 89.872 376370 144840 377590 432710 552980 773730 397450 642140 784510 380850 597050 1146100 870590 968040 455100 479650 1452900 1529100 346880 135340 386570 416980 558510 752210 422100 657520 768590 423020 636400 1120500 862960 978700 525080 548430 1381000 1441000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1714399999.9999998 5861 3430 5549 11071;11072 8928 8928 1 9606 Homo sapiens -0.05601198838508026 EEFGAEPELAVSAPGR Unmodified 1657.7948 0.79476484 3624 V9HWE7;P51570;Q6ZP37;Q71UH7;K7EII7;K7ERJ9;B4E1A8;K7ERN9 HEL-S-19;GALK1 Galactokinase yes no 0 0 0 2 0 1 52.836 52.869 3 5.2277E-11 15701 20230619_1881_Aki_TMTPro18x_K_F2 109.35 85.973 45076 34305 37089 40167 40837 49155 45592 44765 54520 45271 48208 42444 47308 41363 52396 48436 50210 50117 41601 31467 38423 40203 42313 48916 45961 46044 54754 45668 49697 43212 48561 43080 53047 48669 48061 47584 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22972000 5862 3624 5550 11073 8929 8929 1 9606 Homo sapiens -0.007820755324701167 EEFTAFLHPEEFEHMK Unmodified 2019.9037 0.90366336 3928 V9HW95;Q15293;Q15293-2;Q5J7V8;E9PP27 HEL-S-84;RCN1 Reticulocalbin-1 yes no 0 0 0 4.5 1.12 1 1 1 1 60.536 60.571 4 1.2823000000000002E-25 18114 20230619_1885_Aki_TMTPro18x_K_F5 227.89 204.09 45975 38230 45489 65021 64367 98672 77820 74562 92633 69077 67940 80614 83400 64129 77519 86387 85129 92189 42513 35206 46712 63800 65955 96538 78069 77685 92491 70519 71644 80747 84325 67905 79399 86745 81426 87475 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137430000 5863 3928 5551 11074;11075;11076;11077 8930;8931 8930 2 9606 Homo sapiens -0.0654923262450211 EEFTAFLHPEEYDYMK Unmodified 2047.8873 0.88734459 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-2;O43852-4;A0A024R755;B3KNG6;O43852-10;O43852-6;O43852-15;H0Y875 CALU Calumenin yes no 0 0 0 4 1 1 1 62.048 62.087 3 2.6429E-06 19296 20230619_1882_Aki_TMTPro18x_K_F3 116.58 103.6 147220 114390 136540 149420 115820 150940 151180 145260 185810 203770 195580 235410 224280 190560 170350 246510 253500 303690 136000 105030 139390 148020 123150 152330 151470 150410 187840 203730 201660 235900 225520 201090 179200 249740 242090 287660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 186820000 5864 2386 5552 11078;11079 8932;8933 8932 2 9606 Homo sapiens -0.09468358581239045 EEFTSGGPLGQK Unmodified 1248.5986 0.59863121 1628 A0A6Q8PFU3;P43034;A0A6Q8PFT2;A0A6Q8PG63;A0A6Q8PH33;P43034-2 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 0 5 0.816 1 1 1 49.41 49.473 3 2.0775E-05 13522 20230619_1885_Aki_TMTPro18x_K_F5 110.08 52.511 113400 88593 93502 104930 81759 113830 102980 108500 152180 133780 132920 166080 167190 155980 125970 191960 182810 185030 104670 81264 96557 104750 86755 114260 104130 111890 151460 134900 138950 166770 167760 163030 132320 191740 174380 175810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 361860000 5865 1628 5553 11080;11081;11082 8934 8934 1 9606 Homo sapiens -0.015724159157116446 EEGASPLDFD Unmodified 1078.4455 0.44548461 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;B4DSK5;B7Z9U2;B4DH19;B4DGR3;A0A994J5C5;A0A994J855;A0A994J5Y2;Q96D47;D3DXJ4;Q9H3V6 NSF Vesicle-fusing ATPase yes no 0 0 0 1 0 1 58.593 58.593 2 0.0023798 17922 20230619_1880_Aki_TMTPro18x_K_F1 101.41 96.046 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5866 1435 5554 11083 8935 8935 1 9606 Homo sapiens -0.09060031032186089 EEGCTHVIVTTACGSLR Unmodified 1888.8771 0.87713103 1161;3805 Q13126-2;Q13126-3;B4DUC8;A0A384ME80;Q13126;Q13126-4;A0A140CZL4;J3QSB7;Q6FHT1;Q6FHP1;A0A140CZL5;Q13126-7;Q13126-6;Q13126-5;A0A140CZL6;A0A2R8Y4K0;Q05DJ2;Q8WV80 MTAP S-methyl-5'-thioadenosine phosphorylase;Purine nucleoside phosphorylase no no 0 0 0 5 0 1 42.444 42.526 3 2.4739E-09 10595 20230619_1885_Aki_TMTPro18x_K_F5 132.61 106.75 26320 23352 30825 35061 35123 40761 37133 35389 45657 42080 45919 49279 47618 42070 46346 42602 48371 51300 24385 21466 31035 34496 36209 40644 37582 36713 46033 42402 47202 49431 48494 43665 47241 43307 46282 48622 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89626000 5867 1161;3805 5555 11084 8936 8936 1 9606 Homo sapiens -0.03175244787462361 EEGEAFAR Unmodified 907.40356 0.40356022 473;4277 A0A024R7V6;P61019;P61019-2;A0A0A1HAW1;H7C125;O75546;Q8WUD1;A0A3B3ITL1;Q5HYI5;B4DUD4;Q8WUD1-2;Q96K32 RAB2;RAB2A;RAB2B;DKFZp313C1541 Ras-related protein Rab-2A;Ras-related protein Rab-2B no no 0 0 0 1 0 1 35.748 35.748 2 0.00077368 8279 20230619_1880_Aki_TMTPro18x_K_F1 156.4 115.55 85451 52491 66707 82810 79458 93434 74737 82506 125110 91214 105890 138340 117850 114310 88299 114970 172310 172180 78748 48354 69609 81206 81600 93368 77180 85289 123740 93237 110230 137380 118710 118740 95080 118630 164050 162930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209900000 5868 473;4277 5556 11085 8937 8937 1 9606 Homo sapiens -0.05384541930038722 EEGETADTVGCCSLR Unmodified 1682.6876 0.68759893 2724 P11387;B9EG90;A0A7P0T852 TOP1 DNA topoisomerase 1 yes no 0 0 0 1 0 1 40.222 40.222 3 1.2098E-14 10168 20230619_1880_Aki_TMTPro18x_K_F1 190.24 174.12 24935 16045 23410 23769 23034 32924 22810 29878 36329 31183 30241 42616 47168 39328 27470 60066 55814 61953 23014 14765 23910 23481 24042 32495 23448 30744 36012 31809 32111 42651 46703 41772 30025 60020 53171 58801 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135100000 5869 2724 5557 11086 8938 8938 1 9606 Homo sapiens -0.12643736800646366 EEGFPIRPHYFWPLLVGR Unmodified 2212.1582 0.15817898 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 1 5 0 1 61.869 61.917 4 0.038468 18806 20230619_1885_Aki_TMTPro18x_K_F5 53.554 42.919 46257 36244 42922 54066 48331 53094 49055 48564 59028 48655 52985 56070 59699 52644 54622 60460 61237 63013 42736 33328 44026 53083 49813 53641 49725 49954 59307 49423 54965 56481 60497 54821 56029 60760 58539 59816 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77497000 5870 1723 5558 11087 8939 8939 1 9606 Homo sapiens 0.1005862197685019 EEGGENLDQAR Unmodified 1216.532 0.53200821 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 0 1 0 1 33.361 33.361 2 4.3829E-12 7311 20230619_1880_Aki_TMTPro18x_K_F1 207.86 149.27 60336 21257 72520 87805 110030 164830 84027 96903 111180 72630 135760 207470 139550 146670 122940 53909 162680 185620 55685 20059 73363 83962 110990 158970 87114 103050 112510 78900 138770 202030 141720 148360 127100 63291 155430 174820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133210000 5871 1062;1064 5559 11088 8940 8940 1 9606 Homo sapiens -0.0675965147761417 EEGGLYR Unmodified 822.38718 0.38718187 1531 D3DVA3;B4DF47;A0A3B3IUD2;A8K3J5;Q9BUK6-7;Q9BUK6-3;Q9BUK6-2;Q9BUK6;B4DHK3;Q9BUK6-4 MSTO1 Protein misato homolog 1 yes no 0 0 0 1.5 0.5 1 1 35.223 35.251 2 0.076151 7688 20230619_1881_Aki_TMTPro18x_K_F2 74.415 16.952 108030 54617 103480 116990 144860 156560 117820 134910 147330 140800 183290 195160 176770 154240 160950 107420 188820 178720 99618 50596 106190 113390 146510 154700 121350 139430 149820 143630 186130 194090 179870 158030 165160 112900 180320 169030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 391290000 5872 1531 5560 11089;11090 8941 8941 1 9606 Homo sapiens -0.031116230961401925 EEGHAGPDDNEEVMR Oxidation (M) 1699.6744 0.6743917 3519 P29083;Q53F88 GTF2E1 General transcription factor IIE subunit 1 yes no 0 1 0 1 0 1 29.02 29.02 3 0.00062647 5618 20230619_1880_Aki_TMTPro18x_K_F1 78.326 66.41 2690.9 2273.7 3037.6 4831.6 3119.9 6303.5 5452.1 2881.5 6072.8 4775.5 5644.6 5589 4373.1 3903.5 5142.7 8116.7 7044.8 7740.9 2491.3 2100.9 3075 4676.4 3317.8 6172 5371.2 3240.9 6125.1 4756.6 5757 5587 4545.3 4302.8 5338.1 8056.2 6726.9 7353.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9809400 5873 3519 5561 11091 8942 8942 2184 1 9606 Homo sapiens -0.1474585158841819 EEGIGPENLR Unmodified 1112.5462 0.54620171 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 1 0 1 42.515 42.515 2 3.4167E-05 11193 20230619_1880_Aki_TMTPro18x_K_F1 131.5 91.401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5874 3833 5562 11092 8943 8943 1 9606 Homo sapiens -0.005569542586727039 EEGKPLQQEK Unmodified 1184.6037 0.60371659 1958 E7ESP9;A5YM63;P07197;P07197-2 NEFM Neurofilament medium polypeptide yes no 0 0 1 3.5 0.5 1 1 37.909 37.957 3 0.013757 8706 20230619_1883_Aki_TMTPro18x_K_F4 68.484 53.218 78171 44715 86511 85901 69893 91387 58837 64202 63233 75452 142640 188550 95025 114880 134580 59426 132530 117900 72210 41320 86918 83351 73719 91275 60267 67865 67228 79024 140900 183470 100550 117810 135610 64174 126720 111410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74211000 5875 1958 5563 11093;11094 8944 8944 1 9606 Homo sapiens 0.018798879469159147 EEGRYDEEVEVYR Unmodified 1671.7376 0.73764389 4050 Q5SNT2;Q5SNT2-2;H0Y4R5 TMEM201 Transmembrane protein 201 yes no 0 0 1 1 0 1 41.106 41.106 3 0.00011374 10583 20230619_1880_Aki_TMTPro18x_K_F1 104.81 83.046 106350 70221 96358 101420 102420 113240 109500 114240 143120 125350 127070 122630 135340 123040 110990 110710 131960 113650 98145 64594 98836 99993 106170 113600 111040 116900 143230 126070 131430 124590 136780 126240 114430 111660 125930 107980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237700000 5876 4050 5564 11095 8945 8945 1 9606 Homo sapiens -0.07135542808850914 EEGSFQSCSFCK Unmodified 1464.565 0.5649646 1985 B3KTR9;A6XAA7;O60565-2;O60565 GREM1 Gremlin;Gremlin-1 yes no 0 0 0 4.5 0.5 1 1 47.549 47.608 3 0.00010564 12906 20230619_1883_Aki_TMTPro18x_K_F4 100.38 86.47 78209 57118 67129 74808 65908 77731 68419 78380 102430 127020 93529 137200 142800 118150 92108 179970 203990 173650 72184 52461 69138 74125 68759 78386 69921 81294 102300 126030 98771 138080 141910 125770 101190 179210 193880 165110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147770000 5877 1985 5565 11096;11097 8946 8946 1 9606 Homo sapiens -0.1487352874141834 EEGSPLELER Unmodified 1157.5564 0.55643205 1704 P08195-4;P08195-5;P08195;P08195-3;A0A7P0Z4P5;A0A7P0TAN7;A0A7P0Z4A0;A0A7P0T9F7;F5GZS6;P08195-2;A0A7P0TBF8;B4E2Z3;F5H056;F5GZI0 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 0 1 0 1 44.738 44.738 2 0.014463 12207 20230619_1880_Aki_TMTPro18x_K_F1 72.365 55 31803 24889 27442 28831 34217 34219 35355 33090 39120 35974 43965 45870 43079 31187 36488 44040 46901 49676 29366 22825 28347 28870 35019 34182 35693 33967 39816 36497 44847 45626 43652 33361 37837 44336 44793 47113 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30686000 5878 1704 5566 11098 8947 8947 1 9606 Homo sapiens -0.01604391324099197 EEGTPLTLYYSHWR Unmodified 1750.8315 0.83148469 4730 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 NOC2L Nucleolar complex protein 2 homolog yes no 0 0 0 7 0 1 54.829 54.893 3 1.3575000000000002E-29 15690 20230619_1887_Aki_TMTPro18x_K_F7 264.28 247 47537 39148 41898 38430 55706 53119 49077 42731 77980 44305 42534 49171 51250 46168 49264 55172 50771 48889 43915 35843 43205 39090 56598 52408 50708 44425 76312 44938 45735 49590 51974 48172 50245 54936 48550 46508 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107350000 5879 4730 5567 11099 8948 8948 1 9606 Homo sapiens -0.013897789159273088 EEGVLTLWR Unmodified 1101.5819 0.58185893 3104 I3L1P8;Q6IBH0;Q02978;Q02978-2 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 4.5 0.5 1 1 59.414 59.442 2 0.0014108 17657 20230619_1885_Aki_TMTPro18x_K_F5 116.05 93.92 81615 62520 80741 85858 70999 97090 96353 92522 104020 84575 94961 87254 107850 92191 90732 101540 90768 103170 75431 57441 82012 84918 75339 97145 95910 94637 105090 86039 98365 88703 108850 95435 92630 101960 86932 97930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62407000 5880 3104 5568 11100;11101 8949 8949 1 9606 Homo sapiens 0.035131279889810685 EEHCVFR Unmodified 975.42325 0.4232498 1516 Q12756-3;A0A3B3ITW6;A0A3B3ITF7;Q12756;Q12756-2;A0A3B3ITE5;A0A3B3IUA1;A0A3B3IT28;A0A3F2YNW9;A0A3B3IU40;X5D7J0;A0A3B3ITK3 KIF1A Kinesin-like protein KIF1A;Kinesin-like protein yes no 0 0 0 2.5 0.5 1 1 30.993 31.069 3 0.005004 6160 20230619_1881_Aki_TMTPro18x_K_F2 108.24 61.672 28175 21326 26444 28998 24911 21566 18979 23260 22983 24030 32889 36139 31124 26830 24105 29906 38440 29266 26027 19592 26980 28554 25804 22427 19647 23680 23581 24598 33209 35817 31500 28129 25454 29956 36577 27837 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28802000 5881 1516 5569 11102;11103 8950 8950 1 9606 Homo sapiens -0.06544489190923741 EEHGGLIR Unmodified 909.46683 0.46682918 2658 B5BU25;P26368-2;P26368;K7ELP8 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 0 0 0 2.5 0.5 1 1 29.689 29.774 3 0.00014497 5507 20230619_1882_Aki_TMTPro18x_K_F3 143.89 80.58 85849 49492 71300 76882 104140 103000 100780 93663 131450 97325 104650 111760 109550 91460 94485 107650 131740 117020 79124 45598 74163 75691 105470 101950 102670 96429 131020 98682 108880 112100 110980 95883 98462 108410 125590 111100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 371790000 5882 2658 5570 11104;11105 8951;8952 8952 2 9606 Homo sapiens 0.008474435778566658 EEHLCTQR Unmodified 1071.4767 0.47674194 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;B4DQ80;Q8NI98;A0A024R4K5;A0A0S2Z4I4;P06753-5;P06753-7 TPM3;DKFZp686J1372;OK/SW-cl.5;hCG_1787567 Tropomyosin alpha-3 chain no no 0 0 0 2 0.816 1 1 1 24.531 24.606 3 4.1721E-05 3850 20230619_1881_Aki_TMTPro18x_K_F2 173.73 154.95 463670 151330 586370 623270 830570 861960 630840 831130 753780 467350 818990 962650 749390 702280 668720 299810 868380 876630 428070 142890 589230 592720 837450 851700 652100 841000 762240 507030 835020 944920 763680 711950 690290 341370 828990 826480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1987799999.9999998 5883 1095;1096 5571 11106;11107;11108 8953;8954 8954 2 9606 Homo sapiens -0.05613736479062936 EEHPFEK Unmodified 914.4134 0.41339662 2217 B2R5J1;I3L3J4;H6UMI1;Q6IAW1;O95166 GABARAP Gamma-aminobutyric acid receptor-associated protein yes no 0 0 0 2.5 0.5 1 1 36.832 36.889 3 0.005915 8345 20230619_1882_Aki_TMTPro18x_K_F3 100.15 56.637 142520 40408 101510 141730 151010 158720 125610 140660 263420 171180 196550 268710 251860 254130 142820 263070 303570 344100 130930 38022 107480 134730 152600 158600 132290 145790 257640 174620 207500 267730 250610 262970 156680 268360 289180 325820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 83269000 5884 2217 5572 11109;11110 8955;8956 8956 2 9606 Homo sapiens -0.04723353924669027 EEHTQEEGTVPSR Unmodified 1497.6696 0.66956432 3572 P41162 ETV3 ETS translocation variant 3 yes yes 0 0 0 1 0 1 27.96 27.96 3 6.2188E-08 5197 20230619_1880_Aki_TMTPro18x_K_F1 154.47 135.85 2165.6 1612.3 2758.2 3203.3 4559.6 4777.7 4242.8 5010.1 5563.6 2389.2 3796.6 8118.3 6541.1 5905.3 2821.3 2012.9 5519.5 6999 2005.8 1488.8 2783 3121.7 4583.2 4713.2 4335.4 5031.5 5513.4 2732.9 4123.1 7886.4 6416.6 5959.9 3078.1 2368.7 5265.2 6589.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5788000 5885 3572 5573 11111 8957 8957 1 9606 Homo sapiens -0.059363676688462874 EEIAEYR Unmodified 908.42396 0.42396131 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 0 1 0 1 38.99 38.99 2 0.0070326 9616 20230619_1880_Aki_TMTPro18x_K_F1 128.37 67.976 145400 94071 106190 124750 88614 118670 75184 71755 130020 149450 235110 309540 193370 232750 177580 196900 314860 315890 133970 86458 110950 123300 93484 119350 78430 78814 133430 151750 234880 304020 198510 240450 188520 205060 299930 298770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183030000 5886 1958 5574 11112 8958 8958 1 9606 Homo sapiens -0.033913712702315024 EEIAEYRR Unmodified 1064.5251 0.52507234 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 1 2.5 0.5 1 1 33.737 33.798 3 0.00035463 7084 20230619_1882_Aki_TMTPro18x_K_F3 135.83 94.29 121250 110420 121670 102930 103550 95706 69494 73794 85952 115310 176070 185500 136600 139120 160890 146120 214780 189200 112190 101020 123080 104590 107980 96995 72780 78096 90238 116390 174770 183520 142000 145300 166060 149190 204810 179340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112830000 5887 1958 5575 11113;11114 8959;8960 8960 2 9606 Homo sapiens -0.004609195675357114 EEIDHAEYYLYK Unmodified 1571.7144 0.71438925 623 Q92552-2;D6RH20;A0A024RAJ1;A0A8Q3WKZ8;A0A8Q3SHR4;A0A8Q3WL16;B4DT94;G5EA06;A0A8Q3WKF1;Q92552;A0A8Q3WKI2;A0A8Q3WK88;A0A8Q3WKH0;A0A8Q3WKS8 MRPS27 28S ribosomal protein S27, mitochondrial yes no 0 0 0 4 0 1 52.947 52.966 3 0.0023782 15337 20230619_1883_Aki_TMTPro18x_K_F4 69.451 49.873 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5888 623 5576 11115 8961 8961 1 9606 Homo sapiens -0.04859936855518754 EEIEAQIK Unmodified 958.49713 0.49712625 3123 J3KN29;O00233;F5H5V4;F5GX23;O00233-2;F5H7X1;O00233-3 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes no 0 0 0 2 0 1 46.588 46.668 3 0.060143 12897 20230619_1881_Aki_TMTPro18x_K_F2 50.909 10.907 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5889 3123 5577 11116 8962 8962 1 9606 Homo sapiens 0.016217574523807343 EEIGNVQLEK Unmodified 1157.5928 0.59281755 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;G3V4Y7;H0YJZ8;G3V5G2 KTN1 Kinectin yes no 0 0 0 2.5 0.5 1 1 49.584 49.662 2 1.3727E-06 13942 20230619_1882_Aki_TMTPro18x_K_F3 203.55 126.27 108240 84036 83324 97879 85710 89719 101590 95134 120910 126720 143430 130820 133380 112720 116840 146490 148300 135230 99866 77073 86835 97619 89312 91512 102110 97697 122970 126490 145550 132070 135670 118640 121000 145950 141490 128610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183290000 5890 380 5578 11117;11118 8963;8964 8964 2 9606 Homo sapiens 0.02032485572613041 EEIHEYR Unmodified 974.44576 0.44575938 3949 Q16352;Q59EM6 INA Alpha-internexin yes no 0 0 0 1 0 1 30.726 30.726 3 0.00026394 6279 20230619_1880_Aki_TMTPro18x_K_F1 166.05 111.48 81646 46351 75077 70429 14716 19131 23453 24952 33677 82350 112400 121480 98060 95984 90010 76676 121770 141360 75302 42695 75829 68482 20371 23384 23652 26739 36959 81239 111020 120550 100220 98852 93350 81023 116340 133510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52126000 5891 3949 5579 11119 8965 8965 1 9606 Homo sapiens -0.042485665216759116 EEIIPVAAEYDK Unmodified 1375.6871 0.68711187 1063 P11310-2;P11310;Q5HYG7;Q5T4U5;A0A0S2Z366;B4DWX6;B7Z9I1;F6YB23;A0A7P0T932;A0A7P0TB51;A0A7P0TA63;A0A7P0T8J9;A0A7P0TBD1;A0A7P0TAB2;A0A7P0TA39;E9PJM9;A0A7P0TB28;A0A7P0T9W7;E9PRX4 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 2.67 0.471 1 2 56.589 56.619 2;3 3.8799E-08 17038 20230619_1882_Aki_TMTPro18x_K_F3 192.3 144.48 62096 50406 59856 71866 58331 68022 75015 63537 71812 82024 88018 82082 87653 71588 85295 87984 88398 97714 57398 46320 61054 70724 61161 68952 74558 65769 74015 81892 89504 82990 89328 75095 86965 88686 84613 92672 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 325590000 5892 1063 5580 11120;11121;11122 8966;8967 8967 2 9606 Homo sapiens 0.01429579604086939 EEIKPIR Unmodified 883.51272 0.51271674 337 A0A024R5F4;P50416;P50416-2;H3BMD2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 1 5.5 0.5 1 1 38.009 38.093 3 0.070832 8749 20230619_1885_Aki_TMTPro18x_K_F5 58.981 23.101 67618 50039 67229 70480 116880 124460 119000 112800 163750 67951 75211 86173 82278 58940 74458 75889 72365 79841 62484 45993 69124 70174 117560 121440 121070 114800 160450 71814 81711 85738 83340 62632 75746 76209 69310 75764 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121670000 5893 337 5581 11123;11124 8968 8968 1 9606 Homo sapiens 0.0663008876007325 EEILLACEGGTGTCVR Unmodified 1763.8182 0.81821917 4486 Q9GZN8-2;Q9GZN8 C20orf27 UPF0687 protein C20orf27 yes no 0 0 0 3 0 1 51.762 51.827 2 1.7856E-07 14977 20230619_1882_Aki_TMTPro18x_K_F3 161.25 126.88 17615 14636 15113 16552 12025 16042 16465 16145 25253 24097 21349 26078 31809 27840 17934 37816 36075 36190 16270 13416 15526 16556 12899 16262 16612 16703 25085 24001 22558 26452 31503 29181 19591 37685 34341 34391 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37812000 5894 4486 5582 11125 8969 8969 1 9606 Homo sapiens -0.03313721081849508 EEILSGALR Unmodified 986.53966 0.53965977 1761 A0A8I5KY07;A0A8I5KRP1;A0A8I5KRK1;A0A8I5KYQ0;A0A8I5KZB3;Q9H2M9;A0A8I5QJC9;A0A8I5KSQ5;A0A8I5QJG4;A0A8I5KUS2;Q9H2M9-2;F8WDJ2 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 4 0 1 50.146 50.181 2 0.00017622 14068 20230619_1883_Aki_TMTPro18x_K_F4 145.13 19.632 149850 115840 149680 166730 143840 184010 155590 150700 197370 200310 185210 203630 205920 175200 193210 203730 207380 217810 138510 106480 152100 164330 150450 183900 157510 157630 198330 199930 191640 205480 208920 183210 197530 205040 198350 206690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154320000 5895 1761 5583 11126 8970 8970 1 9606 Homo sapiens 0.04585152580625618 EEIQDASQLPPAFDLFEAFAK Unmodified 2365.1478 0.14779303 4524 Q9H7B4;Q3B7A0;B0QZ88;Q9H7B4-3;B0QZA0 SMYD3 Histone-lysine N-methyltransferase SMYD3 yes no 0 0 0 6.5 0.5 1 1 67.088 67.121 3 5.4875E-05 21198 20230619_1886_Aki_TMTPro18x_K_F6 82.36 68.198 4678.9 4237.5 3794.8 4220.8 3082.3 5795.1 4892.4 6153.2 6403.3 4950.7 4546.4 8006.7 6452.3 6779.4 6530.2 10437 12350 10640 4322.5 3878.9 3924.2 4287.4 3330.1 5743.2 4875.5 6224.8 6360.7 5161.9 4861.3 7947.8 6548.4 7218.6 6980.6 10427 11748 10110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8268800 5896 4524 5584 11127;11128 8971;8972 8971 2 9606 Homo sapiens 0.019825049504106573 EEIQETQTPTHSR Unmodified 1554.7274 0.72741355 4471 Q9BYG3;H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 0 0 0 1.5 0.5 1 1 30.754 30.787 3 6.1554999999999994E-46 6293 20230619_1880_Aki_TMTPro18x_K_F1 252.14 145.88 44012 31536 43482 48184 58961 61604 50135 56428 78263 48155 56648 67208 64744 51554 47304 47796 71048 68257 40661 29018 44469 47439 59811 61139 51922 57768 77189 49748 59532 66782 65001 53532 49714 49239 67730 64624 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 202990000 5897 4471 5585 11129;11130 8973;8974;8975 8974 3 9606 Homo sapiens -0.027761057434418035 EEIQSSISGVTAAYNR Unmodified 1723.8377 0.83769228 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;A0A0J9YXZ5;Q6P1N4;A0A087WWP1 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 6.33 0.471 2 1 52.193 52.269 2;3 2.5074999999999997E-52 14860 20230619_1886_Aki_TMTPro18x_K_F6 347.29 255.98 71595 62661 74378 77191 83204 91322 86947 86860 88169 95173 102410 88983 96013 81859 99541 97146 91838 96046 66252 57475 75478 76951 85796 91173 87510 89250 90353 95537 104060 90426 98339 85491 100720 97331 87974 91221 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 332620000 5898 707 5586 11131;11132;11133 8976;8977 8976 2 9606 Homo sapiens 0.0047269452497857856 EEISATQIIVCTPEK Unmodified 1716.8604 0.86040156 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 4.5 0.5 1 1 56.314 56.349 3 6.2067E-08 16412 20230619_1885_Aki_TMTPro18x_K_F5 136.17 106.19 44945 37077 43594 43665 41741 48962 53874 43264 58525 50152 50498 55891 55332 49161 44467 60873 59043 63943 41551 34001 44380 43633 43850 48979 53728 44814 59016 50519 52430 56246 55837 51545 46305 61104 56385 60683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223460000 5899 3312 5587 11134;11135 8978 8978 1 9606 Homo sapiens 0.03064577598206597 EELALLDGSNVVFK Unmodified 1532.8086 0.80862399 3236 Q5STK2;O15212;I7HJT1;A2AB88 PFDN6;HKE2 Prefoldin subunit 6 yes no 0 0 0 6 0 1 63.165 63.214 3 0.02284 19576 20230619_1886_Aki_TMTPro18x_K_F6 55.196 37.707 272630 154900 164470 184310 194320 267010 221800 199480 289440 206980 166510 310140 307870 215780 166690 286860 258650 351800 250790 142300 176710 184740 201040 262030 223920 208730 286130 212110 183640 306520 302860 229680 177740 290340 247230 333110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 445700000 5900 3236 5588 11136 8979 8979 1 9606 Homo sapiens 0.0635320196658995 EELDFQK Unmodified 907.42871 0.42871234 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80;A0A6Q8PGH0 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 2 0.816 1 1 1 49.263 49.309 2 0.0077507 14141 20230619_1881_Aki_TMTPro18x_K_F2 130.04 72.48 711790 513070 486480 695180 834830 1132100 906480 1021800 1734400 978840 1038000 1608000 1555800 1370400 819490 1996200 1947100 2274300 655960 471440 519920 692230 845440 1108100 934130 1049800 1690100 1012500 1123000 1595800 1538700 1454300 915080 2007400 1854300 2156000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1349900000 5901 1428 5589 11137;11138;11139 8980;8981 8980 2 9606 Homo sapiens -0.028704871274612742 EELEEEQR Unmodified 1060.4673 0.46728269 1537;3770 A0A481SVA1;P84157;A0A481SVJ4;A0A481SVD9;P84157-3;A0A481SU50;A0A481SVT9;K7EPS4;P84157-2;K7EQX8;Q6ZR64 MXRA7 Matrix-remodeling-associated protein 7 no no 0 0 0 1 0 1 34.214 34.214 2 0.00053256 7660 20230619_1880_Aki_TMTPro18x_K_F1 183.89 143.85 42376 19690 55574 57040 49101 78324 56682 69869 84820 60473 111230 184310 109350 119960 118180 50159 161920 181690 39179 18361 55300 54730 51926 77236 57645 71733 85683 65387 113310 178910 112300 122150 122040 59114 154640 171100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61946000 5902 1537;3770 5590 11140 8982 8982 1 9606 Homo sapiens -0.06053226283620461 EELEEEQRTEE Unmodified 1419.6001 0.60014735 3770 P84157-2;K7EQX8;Q6ZR64 MXRA7 Matrix-remodeling-associated protein 7 yes no 0 0 1 1 0 1 37.038 37.038 2 3.179E-08 8785 20230619_1880_Aki_TMTPro18x_K_F1 179.1 142.68 140820 90543 117360 149320 115190 151810 151870 155460 251710 187040 244680 339430 261150 264840 233650 226410 365930 431300 129860 83437 121380 145880 121250 153260 154030 159510 250150 192100 252690 334720 265160 273640 245330 239590 349290 407240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278750000 5903 3770 5591 11141 8983 8983 1 9606 Homo sapiens -0.09286871408289699 EELEEICK Unmodified 1048.4747 0.47467625 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DYA2;H0YHU8 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 0 1.33 0.471 2 1 48.707 48.729 2;3 0.0016547 13862 20230619_1880_Aki_TMTPro18x_K_F1 139.19 92.119 53370 44885 47052 56528 55549 68184 55939 59172 76771 62601 71174 87012 89459 83271 64209 115370 111170 117590 49310 41185 48516 56262 57146 67834 57021 61168 76778 63876 74164 87157 89639 87668 68613 115370 105960 111640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60303000 5904 1555 5592 11142;11143;11144 8984;8985 8985 2 9606 Homo sapiens -0.04762210007561407 EELEEVIK Unmodified 987.51244 0.51244197 1160 A0A109NGN6;P28066;Q5U0A0;P28066-2 PSMA5 Proteasome subunit alpha type-5;Proteasome subunit alpha type yes no 0 0 0 2 0 1 53.271 53.304 2 0.0025151 15875 20230619_1881_Aki_TMTPro18x_K_F2 125.5 64.908 68844 40844 50352 68279 59876 111770 65674 70572 318570 80896 69441 133320 151580 129030 63914 198770 187570 248080 63407 37660 52998 67152 62581 108600 73372 75214 299540 83471 86765 132830 148240 136980 74119 200890 178690 234880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48765000 5905 1160 5593 11145 8986 8986 1 9606 Homo sapiens 0.018186242495858096 EELEFEVPFR Unmodified 1293.6241 0.62411768 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 2.5 0.5 1 1 61.459 61.469 2 3.5211E-05 19029 20230619_1882_Aki_TMTPro18x_K_F3 131.44 101.25 76971 55390 71261 85199 60633 97752 79020 88393 110760 95538 104070 131210 148030 137700 97233 179970 162360 228540 71076 50971 72829 83693 64631 97553 79612 91135 110740 97331 109140 131890 147440 144070 103840 182590 155180 216310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88405000 5906 4746 5594 11146;11147 8987;8988 8988 2 9606 Homo sapiens -0.010949413932848984 EELEGQLGPMAQETQAR Unmodified 1885.884 0.88399055 2790 CON__Q03247 yes yes 0 0 0 2 0 1 50.792 50.843 3 1.0879E-15 14819 20230619_1881_Aki_TMTPro18x_K_F2 163.84 154.47 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5907 2790 5595 11148 8989 8989 1 9606 Homo sapiens -0.023516086352401544 EELEQASQAHGAR Unmodified 1424.6644 0.66441937 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 2 0 1 32.782 32.84 3 5.7985E-90 6826 20230619_1881_Aki_TMTPro18x_K_F2 277.1 245.34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5908 349;3906 5596 11149 8990 8990 1 9606 Homo sapiens -0.0309262674081765 EELEQTYHAK Unmodified 1246.583 0.58298115 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 LMNB1 Lamin-B1 yes no 0 0 0 2.5 0.5 1 1 39.953 40.016 3 1.2653E-05 9808 20230619_1881_Aki_TMTPro18x_K_F2 147.62 114.4 267140 173300 210520 242830 247810 274680 200780 240430 405730 348490 382360 488560 499480 483750 266800 646390 694430 679320 246260 159370 219250 239810 253820 274520 211580 250840 400780 350980 398820 489630 495980 507440 301070 647520 660190 644930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1115900000 5909 3482 5597 11150;11151 8991 8991 1 9606 Homo sapiens -0.03044702432748636 EELFIQK Unmodified 905.48583 0.48583328 743 B4DSD7;E9PFR3;A0A024RD11;Q14738;A8K6Y2;Q59EF0;H0Y8C4 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes no 0 0 0 6 0 1 59.772 59.834 3 0.090541 18060 20230619_1886_Aki_TMTPro18x_K_F6 44.135 1.1085 25669 21045 23275 28353 25489 16977 22901 24885 23883 42626 39347 40200 45875 39360 33960 49277 46585 51184 23718 19326 23888 27884 26147 18248 23299 25354 24987 42015 39921 40890 46053 41161 35525 49417 44482 48578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3923000 5910 743 5598 11152 8992 8992 1 9606 Homo sapiens 0.02930980148892104 EELFIVSK Unmodified 963.5277 0.5276981 435 A0A024R7A8;P15121;Q59EL5;E9PCX2;E9PEF9 AKR1B1 Aldose reductase yes no 0 0 0 6 0 1 57.659 57.728 3 0.016942 17168 20230619_1886_Aki_TMTPro18x_K_F6 71.223 30.791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5911 435 5599 11153 8993 8993 1 9606 Homo sapiens 0.04447535837425676 EELGFRPEYSASQLK Unmodified 1752.8683 0.86826413 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9;Q05D33;Q6PJL0 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 1 6.5 0.5 1 1 50.979 51.056 3 0.084836 14376 20230619_1886_Aki_TMTPro18x_K_F6 31.677 12.888 124200 108230 104850 141170 116960 152000 127310 125470 160470 163510 154670 162180 164000 130550 132240 187040 170030 174560 114740 99331 108550 139910 121090 152210 128770 131060 161450 163180 159380 163630 165560 138720 137420 186170 162350 165910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138490000 5912 261 5600 11154;11155 8994 8994 1 9606 Homo sapiens 0.021944729100141558 EELGLIEQAYDNPHEALSR Unmodified 2183.0495 0.049475973 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 2.5 0.5 1 1 57.201 57.226 3 1.2496E-72 17291 20230619_1882_Aki_TMTPro18x_K_F3 271.72 258.6 67582 51366 62369 73332 58431 84456 70014 71067 85048 78906 79923 86911 93211 75670 77351 91261 89205 98156 62424 47214 63824 72350 61507 84175 70395 73745 85586 79594 82860 87475 93942 79277 79668 91801 85298 93123 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 567860000 5913 1863 5601 11156;11157 8995;8996 8996 2 9606 Homo sapiens 0.005273214252611069 EELIGIAYNR Unmodified 1176.6139 0.61388734 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8;H0YJB6 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 5.5 0.5 1 1 53.147 53.222 2 0.0013901 15146 20230619_1885_Aki_TMTPro18x_K_F5 131.41 83.56 79651 64572 77133 89276 75436 82005 85769 89170 106910 126190 115140 131630 148350 114190 96675 157160 149750 169180 73628 59317 78610 88014 78791 83637 86559 91592 108190 125670 119240 132760 147870 120720 102480 157710 142900 160480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117050000 5914 385 5602 11158;11159 8997 8997 1 9606 Homo sapiens 0.032644956721242124 EELKPDQK Unmodified 985.50803 0.50802529 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;Q96K98;Q96K97;Q9UHB9-3 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 1 4 0 1 38.959 39.002 3 0.014106 9133 20230619_1883_Aki_TMTPro18x_K_F4 73.985 45.242 75173 33008 92691 104210 146400 152740 115730 145750 120870 87078 143930 179940 126990 132700 148370 59799 171280 175520 69444 30856 93573 99854 146860 150440 118710 147730 123600 93964 146150 176630 131330 134580 151250 68046 163690 165470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65533000 5915 4661 5603 11160 8998 8998 1 9606 Homo sapiens 0.014691598266608707 EELLEYEEK Unmodified 1180.5499 0.54994968 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 1 0 1 53.295 53.295 3 0.035799 15734 20230619_1880_Aki_TMTPro18x_K_F1 54.608 37.937 16695 14916 21193 17758 17283 20481 20277 19311 23915 17838 18223 20607 20038 16383 18751 23587 21134 29056 15480 13676 21076 17747 18344 20475 20388 19774 23913 18201 19062 20656 20334 17431 19252 23872 20252 27511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10916000 5916 1213 5604 11161 8999 8999 1 9606 Homo sapiens -0.03310329275473123 EELLFGGK Unmodified 891.47018 0.47018322 2017 Q68E10;E9PB90;A8K2U2;P52789;Q53SG7;Q7Z7Q6 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 yes no 0 0 0 5 0 1 56.296 56.357 2 0.0026042 16377 20230619_1885_Aki_TMTPro18x_K_F5 124.08 42.782 96336 70150 81394 92018 80706 112340 88939 86369 103940 120580 116040 132640 138660 114260 131960 147570 144440 146600 88904 64432 84003 91352 84350 111400 89683 90958 105640 120390 119610 133450 140470 120240 135080 147660 138100 139240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32923000 5917 2017 5605 11162 9000 9000 1 9606 Homo sapiens 0.020106936318711632 EELMESR Oxidation (M) 908.39095 0.39094662 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 LMNB1 Lamin-B1 yes no 0 1 0 1 0 1 32.076 32.076 2 0.030264 6781 20230619_1880_Aki_TMTPro18x_K_F1 90.862 32.043 67454 42499 60837 66196 82383 85957 56387 62405 77959 71334 87373 87783 79638 77604 80618 63729 98142 93019 62232 39139 62679 65104 83197 84866 59073 65613 78569 72156 88864 87979 81648 79646 82827 65969 93697 88058 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227390000 5918 3482 5606 11163 9001 9001 2128 1 9606 Homo sapiens -0.0669132138458508 EELMESR Unmodified 892.39603 0.396032 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 LMNB1 Lamin-B1 yes no 0 0 0 1.5 0.5 1 1 38.501 38.532 2 0.0056347 9406 20230619_1880_Aki_TMTPro18x_K_F1 139.31 31.884 205010 134630 179790 180660 206040 243140 168790 164350 245470 215660 246770 259670 266230 223150 208800 200880 278990 255550 189140 123740 185100 179390 211300 239260 174770 174750 245750 216720 253960 260200 268400 230290 217140 205350 266100 242230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 362950000 5919 3482 5606 11164;11165 9002 9002 1 9606 Homo sapiens -0.054470175219762496 EELMSEGVIQYDDHCR Unmodified 1979.8353 0.8353258 1361 E7ETD6;E9PE19;A0A2R8Y7Q1;J3QQK4;Q12830-4;Q12830-2;Q12830;F5GXF5;B4DDK2;B4DM40 BPTF Nucleosome-remodeling factor subunit BPTF yes no 0 0 0 1.5 0.5 1 1 49.979 50.008 3 0.00012369 14485 20230619_1881_Aki_TMTPro18x_K_F2 92.8 89.792 73265 59180 74831 82078 69643 84467 73278 78651 97619 88896 86158 88728 91136 84572 78254 97164 98853 100640 67753 54366 75852 81014 72945 85064 74458 81025 97616 89321 89157 89940 92320 88021 81042 97580 94395 95547 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40315000 5920 1361 5607 11166;11167 9003;9004 9004 2 9606 Homo sapiens -0.11539845266656812 EELNAISGPNEFAEFYNR Unmodified 2098.9596 0.95959833 2066 B3KY12;A8K7V1;A8K566;Q12874;Q53HM6 SF3A3 Splicing factor 3A subunit 3 yes no 0 0 0 4 0 1 61.907 61.912 3 1.3682E-38 19115 20230619_1883_Aki_TMTPro18x_K_F4 252.3 234.2 41262 33545 33258 39492 42141 44460 45082 34750 48817 49862 45315 44095 58493 44783 48414 61289 60720 69743 38091 30763 34623 39448 43150 44376 45363 36607 49422 49432 47227 45073 58784 47096 50159 61745 58040 66120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 263510000 5921 2066 5608 11168 9005 9005 1 9606 Homo sapiens -0.045923081833279866 EELQANGSAPAADKEEPAAAGSGAASPSAAEK Unmodified 2981.385 0.38501621 3524 P29966;Q6NVI1 MARCKS Myristoylated alanine-rich C-kinase substrate yes no 0 0 1 2.5 0.5 1 1 44.179 44.257 4 6.8136E-30 11484 20230619_1882_Aki_TMTPro18x_K_F3 170.32 159.01 30260 18636 28117 29076 23266 40277 29727 29475 38917 37041 43883 54095 46305 41888 41608 48539 52030 64143 27921 17164 28691 28629 24861 39576 29892 31066 39307 37560 44961 53699 46986 43963 43010 49517 49765 60714 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 213270000 5922 3524 5609 11169;11170 9006;9007 9007 2 9606 Homo sapiens -0.026420901554047305 EELQSGVDAANSAAQQYQR Unmodified 2063.9508 0.95082456 707 P46940;A4QPB0;A0A024RC65;A0A0J9YXZ5;Q6P1N4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 4.5 0.5 1 1 49.481 49.537 3 7.9739E-61 13775 20230619_1883_Aki_TMTPro18x_K_F4 307.19 286.64 41173 34217 38714 44013 43915 43600 39721 43668 54387 56115 58879 60013 63824 58102 50889 64671 68372 76686 38057 31405 39629 43633 45086 44137 40768 44935 54782 56170 60403 60684 64409 60349 53018 65511 65307 72679 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 167210000 5923 707 5610 11171;11172 9008;9009 9008 2 9606 Homo sapiens -0.03859281819768512 EELRELNDR Unmodified 1172.5786 0.57856447 3482;1473 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5;Q03252;A0A384NPH0 LMNB1;LMNB2 Lamin-B1;Lamin-B2 no no 0 0 1 1.5 0.5 1 1 37.027 37.057 3 1.3498E-05 8786 20230619_1880_Aki_TMTPro18x_K_F1 190.88 141.53 482130 385500 467750 456890 577280 602120 485260 541550 621390 555690 682140 614600 636350 600170 559460 605580 819050 707810 445640 353570 477830 457540 588490 596580 499120 557530 627520 562880 694410 621100 647920 619740 584760 614110 780380 671600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 579450000 5924 3482;1473 5611 11173;11174 9010;9011 9010 2 9606 Homo sapiens -0.000821668556682198 EELSNVLAAMR Oxidation (M) 1247.618 0.61798644 4731 Q9Y3U8 RPL36 60S ribosomal protein L36 yes yes 0 1 0 4.5 0.5 1 1 50.311 50.364 2 0.068269 14154 20230619_1883_Aki_TMTPro18x_K_F4 57.149 40.924 163330 130300 149300 167100 153270 198360 174530 172730 206110 146710 148640 142090 168420 138640 156310 178610 171690 168770 150900 119600 153040 166090 159760 197520 175680 177550 205730 149670 156050 144470 170710 145260 160130 178230 164100 160410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 197690000 5925 4731 5612 11175;11176 9012;9013 9012 2884 2 9606 Homo sapiens 0.004082171035179272 EELSNVLAAMR Unmodified 1231.6231 0.62307182 4731 Q9Y3U8 RPL36 60S ribosomal protein L36 yes yes 0 0 0 6.5 0.5 1 1 61.085 61.133 2 7.7735E-12 18258 20230619_1887_Aki_TMTPro18x_K_F7 199.54 168.47 830740 655310 709710 723910 607170 982330 795720 857010 973350 746210 577910 600090 797810 613270 677990 887430 780170 776170 767060 600680 729980 729010 646890 970080 796840 880740 965570 756240 621370 616720 801490 646990 698320 880470 745450 738400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4530000000 5926 4731 5612 11177;11178 9014;9015 9015 2 9606 Homo sapiens 0.01652520966126758 EELTLEGIR Unmodified 1058.5608 0.56078914 2105 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;B4DNH2;J3KTB5;J3KSZ0;B4DKP9;J3KTN0 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 0 0 2 0 1 50.897 50.944 2 2.8673E-05 14869 20230619_1881_Aki_TMTPro18x_K_F2 167.23 96.704 523890 362560 389480 477220 415160 441280 455500 431490 631080 521100 487560 478020 606290 355740 360500 638400 483720 458640 482940 333100 407690 471910 430820 448780 462160 444070 627160 520740 511730 483390 602400 386420 379250 626050 461460 437620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 469440000 5927 2105 5613 11179 9016 9016 1 9606 Homo sapiens 0.03385117889456524 EELVAAVEDVR Unmodified 1228.6299 0.62993134 1411;3506 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;E5RIB1;E5RGY6;E5RG03;E5RHV7;E5RJL0;E5RIE0;P26232-2;P26232-5;P26232;P26232-3;C9IZ88 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 0 2 0 1 57.166 57.183 3 0.00016072 17471 20230619_1881_Aki_TMTPro18x_K_F2 93.345 66.672 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5928 1411;3506 5614 11180 9017 9017 1 9606 Homo sapiens 0.024761571183717024 EELYQNLTR Unmodified 1164.5775 0.57750184 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4.5 0.5 1 1 47.926 48.002 2 2.6858E-11 13029 20230619_1883_Aki_TMTPro18x_K_F4 179.51 141.78 60133 52160 54709 60765 62226 63865 59165 62025 66749 80256 90272 105550 100890 85537 74019 88758 94245 104400 55582 47819 56164 60708 63940 64333 60105 63988 68577 80866 92046 105260 101350 89069 76939 89982 90048 98958 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121420000 5929 1022;3868 5615 11181;11182 9018;9019 9018 2 9606 Homo sapiens 0.0017961877540528803 EEMHLEDSANFIK Oxidation (M) 1577.7032 0.70317264 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 1 0 2 0 1 47.412 47.487 3 0.0064174 13286 20230619_1881_Aki_TMTPro18x_K_F2 61.42 42.096 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5930 1076 5616 11183 9020 9020 638 1 9606 Homo sapiens -0.062570822213047 EEMHLEDSANFIK Unmodified 1561.7083 0.70825802 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 0 0 3.5 0.5 1 1 51.749 51.814 3 7.3816E-11 14955 20230619_1882_Aki_TMTPro18x_K_F3 174.05 160.91 81433 68859 89870 93100 71042 83717 90194 83146 93076 99844 95862 92570 124600 97988 111280 120090 117830 130300 75379 63230 90334 91900 75797 85337 89949 85476 94839 99798 99479 94541 125570 102140 113800 120860 112760 123610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123740000 5931 1076 5616 11184;11185 9021;9022 9021 2 9606 Homo sapiens -0.050127783586958685 EEMIHNLQ Oxidation (M) 1028.4597 0.45969489 1088 A0A0S2Z489;O00232-2;O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 1 0 1 0 1 36.706 36.706 2 0.074625 8637 20230619_1880_Aki_TMTPro18x_K_F1 64.236 58.87 33490 26379 27867 33989 44567 43236 39242 38597 53233 40921 44686 46247 44823 39154 39514 43330 51733 45894 30917 24217 29059 33807 44818 42925 40283 39811 53069 41425 46258 46460 45514 40839 40965 43613 49339 43584 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73946000 5932 1088 5617 11186 9023 9023 649 1 9606 Homo sapiens -0.05339657084891769 EEMQAQLR Unmodified 1003.4757 0.4756793 151 Q9UH99-2;Q9UH99;B4E2A6;A0A024R1P7;A0A8I5QKM0;B4DIU6;Q9UH99-3;B0QY60;A8K129;B0QY64;Q6NT72 SUN2;UNC84B SUN domain-containing protein 2 yes no 0 0 0 2 0 1 37.74 37.803 2 0.0044648 8815 20230619_1881_Aki_TMTPro18x_K_F2 116.37 71.924 66492 43883 53613 58961 74855 82681 80007 78099 96782 74860 83595 87958 89667 72104 85169 87558 91483 85178 61310 40334 55899 58601 76262 81680 80841 79998 97053 76269 86692 88171 91090 75721 87042 87608 87426 80951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87060000 5933 151 5618 11187 9024 9024 1 9606 Homo sapiens -0.025919508479887554 EENAEQQALAAK Unmodified 1300.6259 0.62590859 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 2.5 0.5 1 1 44.061 44.13 2;3 3.9809000000000004E-25 11746 20230619_1881_Aki_TMTPro18x_K_F2 215.87 175.52 67386 57023 67160 73543 76628 85152 72879 73669 100080 89695 95670 99229 103740 82214 93087 98298 113240 100680 62321 52335 68420 73045 78798 84959 74546 76485 100230 90115 98731 99711 105100 86243 95976 98646 108060 95644 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66129000 5934 4191 5619 11188;11189 9025;9026 9025 2 9606 Homo sapiens -0.012379323753293647 EENCAILK Unmodified 975.46953 0.46953129 3637 Q9BW75;Q96CV8;P52888;K7EP46;B4DU96 THOP1 Thimet oligopeptidase yes no 0 0 0 3 0 1 44.218 44.291 2 0.0089897 11498 20230619_1882_Aki_TMTPro18x_K_F3 103.56 53.219 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5935 3637 5620 11190 9027 9027 1 9606 Homo sapiens -0.019184690794986636 EENIQTLLINPNIATVQTSQGLADK Unmodified 2709.4185 0.41848859 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 7 0 1 62.973 63.005 4 0.0054452 19223 20230619_1887_Aki_TMTPro18x_K_F7 63.893 50.162 52823 37837 52431 46485 46151 51875 49816 53059 58316 61063 57329 68464 73349 56907 55945 74754 71034 75866 48803 34731 53158 46331 48552 52075 50313 54325 58938 61495 59630 68753 73503 60048 58132 74836 67852 72029 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 365050000 5936 2980 5621 11191 9028 9028 1 9606 Homo sapiens 0.13215608145083024 EENLFSWK Unmodified 1051.4975 0.4974606 3565 P38432 COIL Coilin yes yes 0 0 0 5.5 0.5 1 1 60.107 60.164 2 0.00047538 18190 20230619_1886_Aki_TMTPro18x_K_F6 175.51 100.77 78952 69159 85022 80587 68770 94733 94487 94505 99546 99366 93353 88135 109160 85275 92267 100190 92821 107230 73083 63400 85627 80668 73525 94673 93955 96667 100910 99821 96728 89906 110040 88915 94198 100820 88905 101720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37390000 5937 3565 5622 11192;11193 9029 9029 1 9606 Homo sapiens -0.026228228277886956 EENNHLQEELER Unmodified 1538.6961 0.69611342 3050 H0YJ97;Q15643-2;Q15643 TRIP11 Thyroid receptor-interacting protein 11 yes no 0 0 0 1 0 1 37.17 37.17 3 9.939E-10 8873 20230619_1880_Aki_TMTPro18x_K_F1 158.52 121.38 19484 15374 19956 20429 19849 25493 22944 20685 30376 23889 25753 28993 30303 26067 20673 27329 33433 32505 18016 14118 20241 20276 20748 25272 23175 21559 30321 24149 26847 29091 30343 27057 21930 27713 31859 30822 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32057000 5938 3050 5623 11194 9030 9030 1 9606 Homo sapiens -0.05168678777522473 EENPEGPPNANEDYR Unmodified 1729.718 0.71797108 1812 X5D7P8;A0A8V8TKT5 STK39 yes no 0 0 0 1 0 1 37.292 37.292 3 0.0039508 8905 20230619_1880_Aki_TMTPro18x_K_F1 70.134 60.476 27504 18022 23087 26687 29037 25336 31674 30683 38154 27395 34285 28553 29370 26243 28643 31075 34372 28193 25367 16584 23927 26216 29725 25852 31970 30894 38297 27914 35103 28891 30113 27391 29467 30985 32789 26831 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8488900 5939 1812 5624 11195 9031 9031 1 9606 Homo sapiens -0.1176991881959566 EENRRPLTEPPVR Unmodified 1591.8431 0.84305243 3336 O94888;C9JAT7;B4E126 UBXN7 UBX domain-containing protein 7 yes no 0 0 2 4.5 0.5 1 1 30.807 30.878 4 6.3438E-06 5859 20230619_1883_Aki_TMTPro18x_K_F4 131.66 97.478 36765 31430 30976 43012 37271 50116 39032 46358 56568 52259 51290 58278 60452 52941 37628 66486 66307 66507 33961 28863 32128 42547 38382 50016 39799 47755 56434 52697 53282 58707 60368 55492 40406 66506 63166 63168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210000000 5940 3336 5625 11196;11197 9032 9032 1 9606 Homo sapiens 0.07080462898079531 EENSTEEQALEDQNAK Unmodified 1833.7864 0.78644457 4579 Q9NQZ2 UTP3 Something about silencing protein 10 yes yes 0 0 0 1 0 1 43.143 43.143 3 9.4577E-26 11468 20230619_1880_Aki_TMTPro18x_K_F1 226.39 216.19 64430 49885 56588 63664 77423 90587 74195 71655 97206 77081 85784 88682 96110 70493 67435 86515 97373 89674 59496 45794 58504 63484 78784 89101 75673 74650 97222 78019 88979 88885 96354 74212 70828 86803 92823 85168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133880000 5941 4579 5626 11198 9033 9033 1 9606 Homo sapiens -0.09709719030388442 EENTIILQQLLPLR Unmodified 1678.9618 0.96177059 2141 A8K9T8;Q9BYT8;B3KU23;E9PCB6;Q9BQD0;H0YAK4 NLN Neurolysin, mitochondrial yes no 0 0 0 8 0 1 63.971 63.994 2 2.5494E-12 19538 20230619_1888_Aki_TMTPro18x_K_F8 222.49 200.41 28556 15936 20429 24617 16413 27371 23412 24835 34340 28717 27245 34914 37073 35560 22890 48071 44447 45168 26290 14684 21405 24166 17670 27374 23535 25651 34074 29027 28749 35197 36911 37293 24855 47862 42324 42929 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148240000 5942 2141 5627 11199 9034 9034 1 9606 Homo sapiens 0.14944817083096495 EEPAAAGSGAASPSAAEK Unmodified 1599.7376 0.73764389 3524 P29966;Q6NVI1 MARCKS Myristoylated alanine-rich C-kinase substrate yes no 0 0 0 2.5 0.5 1 1 38.818 38.878 3 6.224799999999999E-19 9263 20230619_1881_Aki_TMTPro18x_K_F2 184.8 170.11 54397 28690 55232 61530 57485 106300 60120 58392 120820 70244 107020 176310 141370 167540 82492 105170 255570 340760 50194 26572 56162 59903 60073 102810 62310 63334 118890 73790 112320 173600 140940 169940 94594 119720 243440 320850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 428440000 5943 3524 5628 11200;11201 9035;9036 9035 2 9606 Homo sapiens -0.038235428088682966 EEPCLLK Unmodified 887.44225 0.44225391 3484 P21333;P21333-2;Q60FE5;Q60FE6;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5F3;H7C2E7 FLNA;FLJ00119 Filamin-A yes no 0 0 0 3.5 0.5 1 1 47.764 47.824 2 0.019071 13170 20230619_1882_Aki_TMTPro18x_K_F3 106.42 59.348 241210 170460 190430 212100 241160 291680 288590 260190 319090 294300 302340 354660 336370 292870 273270 352300 370570 362850 222460 156500 198660 211780 248080 288100 288980 268920 322650 297510 312790 355080 339390 307220 284780 353440 353560 344550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 293790000 5944 3484 5629 11202;11203 9037 9037 1 9606 Homo sapiens -0.005969526198668973 EEPFFPPPEEFVFIHAVPVEER Unmodified 2640.29 0.2900406 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 4.5 0.5 1 1 63.801 63.828 3 4.3932E-12 19679 20230619_1885_Aki_TMTPro18x_K_F5 124.86 116.57 24237 24171 20388 28111 25487 29585 30378 26553 26588 33565 34958 32409 37743 28569 31227 36642 31291 47906 22413 22148 21162 28075 26205 29738 30219 27538 27665 33498 35577 32835 38089 30065 31908 37297 30053 45321 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123600000 5945 3957 5630 11204;11205 9038;9039 9039 2 9606 Homo sapiens 0.03550717692633043 EEPGEDFPAAR Unmodified 1216.536 0.53603095 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TND0;A0A8V8TLK4 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 1 0 1 41.516 41.516 2 0.0076701 10792 20230619_1880_Aki_TMTPro18x_K_F1 79.489 49.715 40150 30315 26203 28593 39668 48012 37919 32216 44175 37528 42998 45338 43091 42421 39452 43077 43488 46589 37001 27756 28002 29276 40170 46721 38499 34151 44584 37918 44191 45567 43845 43862 40425 43470 41591 44202 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15284000 5946 1817 5631 11206 9040 9040 1 9606 Homo sapiens -0.06357561983918458 EEPGPLR Unmodified 796.40792 0.40791731 2565 H3BUV2;B4DPA0;E5KTI5;P78549-3;P78549-2;P78549;A0A494C106;H3BPD5 NTHL1 Endonuclease III-like protein 1 yes no 0 0 0 1.5 0.5 1 1 35.051 35.079 2 0.074261 7737 20230619_1881_Aki_TMTPro18x_K_F2 75.269 58.714 21682 13828 22315 23921 28357 30564 31849 30838 33835 28875 36115 39656 35299 31013 29355 23726 43553 37960 20026 12752 22722 23400 29056 30390 31963 31433 34421 29617 36930 39441 35788 31901 30701 24779 41495 35924 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27525000 5947 2565 5632 11207;11208 9041 9041 1 9606 Homo sapiens 0.0015696728353304934 EEPGSDSGTTAVVALIR Unmodified 1700.8581 0.85809337 2230 Q6IAU5;B2R665;O15355;B4DDC8;B3KXL8;Q96IN7;Q59GB2 PPM1G Protein phosphatase 1G yes no 0 0 0 3.33 0.471 2 1 55.617 55.642 2 4.543099999999999E-40 16604 20230619_1882_Aki_TMTPro18x_K_F3 277.11 253.26 28586 23541 29460 33842 23816 34814 28326 31156 39637 41122 34179 45656 51175 39151 32198 52984 49802 64039 26440 21633 29803 33325 25392 35016 28662 32348 39565 41166 36123 45894 50780 41371 34165 53564 47579 60655 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207620000 5948 2230 5633 11209;11210;11211 9042;9043 9042 2 9606 Homo sapiens 0.035698651847496876 EEPIYIITEYMAK Unmodified 1598.7902 0.79019673 2023;3404 A8K379;P07948;B4DQ79;Q6NUK7;P07948-2 LYN Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lyn no no 0 0 0 5.5 0.5 1 1 64.847 64.892 3 4.5282E-10 20305 20230619_1886_Aki_TMTPro18x_K_F6 169.89 143.26 92785 89171 100210 108270 86475 110580 82265 71448 91894 106550 111380 111700 114970 97976 116740 111400 116180 142590 85946 81753 101020 107770 90911 110740 83554 76728 93935 105980 113540 112670 117290 102290 118620 113480 111340 135000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236810000 5949 2023;3404 5634 11212;11213 9044 9044 1 9606 Homo sapiens 0.014753240004210966 EEPLTPR Unmodified 840.43413 0.43413207 3241 O15357;O15357-2 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 0 0 0 2 0 1 35.644 35.7 2 0.037414 7961 20230619_1881_Aki_TMTPro18x_K_F2 91.906 53.668 47576 32602 49811 45582 65592 67589 57318 54411 87787 64723 85026 82591 79659 71554 73223 51277 89741 81872 43965 29974 50619 45244 66674 66374 59197 56769 87497 65476 87095 82609 81200 73124 75351 53652 85649 77467 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24197000 5950 3241 5635 11214 9045 9045 1 9606 Homo sapiens 0.0075323645500020575 EEPSNPFLAFVEK Unmodified 1505.7402 0.74021007 1947 A4FUT8;Q7LBC6;Q7LBC6-2 JMJD1B;KDM3B Lysine-specific demethylase 3B yes no 0 0 0 5.5 0.5 1 1 63.846 63.892 3 0.0034406 19700 20230619_1885_Aki_TMTPro18x_K_F5 71.548 56.858 61210 72808 84344 56359 124090 81403 93559 97588 89566 60856 70545 61304 72852 53890 107910 54578 74601 63214 56937 66472 84114 58767 124390 81001 96000 97530 90677 63496 73413 62015 75862 55926 106970 55496 71620 59991 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133060000 5951 1947 5636 11215;11216 9046;9047 9046 2 9606 Homo sapiens 0.007569573867158397 EEPSVAPSSTGK Unmodified 1187.567 0.56699673 1143 A0A0S2Z5U1;Q8N183;A0A0S2Z5U2 NDUFAF2 Mimitin, mitochondrial yes no 0 0 0 3 0 1 39.44 39.494 3 0.0014762 9392 20230619_1882_Aki_TMTPro18x_K_F3 83.226 71.36 59545 44584 61294 67944 69420 92057 67460 77641 86762 73366 92126 92670 100920 80021 89740 73411 104940 92838 55044 41016 62299 66962 71562 90846 68766 80165 87459 74996 94648 92759 102150 82657 92186 75030 100180 88017 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78622000 5952 1143 5637 11217 9048 9048 1 9606 Homo sapiens -0.0192840866966435 EEPWVDPNSPVLLEDPVLCALAK Unmodified 2590.2989 0.29889072 3794 Q04828;H0Y804;B4DK69;P52895;Q59GU2 AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C2 yes no 0 0 0 5.5 0.5 1 1 66.04 66.083 3 1.8047E-08 20615 20230619_1885_Aki_TMTPro18x_K_F5 106.03 95.626 2382 2327.2 1861.6 3993.5 5302.8 8347.2 14350 15045 20503 3757.5 3697.3 5534.7 3942.9 4030.1 5219 4901.7 4003.1 6003.8 2201.2 2142.3 2015.2 3954.3 5504.8 8245.2 14098 14591 19800 4479.5 4610.4 5491.9 4089.8 4249.9 5216.6 4974.2 3855.7 5683.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35068000 5953 3794 5638 11218;11219 9049 9049 1 9606 Homo sapiens 0.0673532326682107 EEPYFGMGK Unmodified 1056.4586 0.45863226 1260 A0A1B0GVH5;A0A1B0GTC3;B3KU60;Q9C0B1;A0A1B0GUC3;A0A1B0GU26;A0A1B0GTC5;A0A1B0GV98;A0A1B0GTY1;A0A1B0GTI3 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes no 0 0 0 4 0 1 52.471 52.495 2 0.028086 15155 20230619_1883_Aki_TMTPro18x_K_F4 70.856 47.837 81198 58315 71721 77747 65134 86288 79553 81920 89905 107670 96823 98373 114080 97532 97467 113090 105790 113160 74951 53574 73600 77017 68709 86460 79724 84659 91396 107130 99777 100240 115090 101470 99951 113350 101190 107450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11767000 5954 1260 5639 11220 9050 9050 1 9606 Homo sapiens -0.06733871453798201 EEQEETSAIR Unmodified 1190.5415 0.54151026 2096 B3KM89;A8K6V0;O94855;O94855-2;E9PDM8;Q49AI3;E9PC44;Q4W5D3 SEC24D Protein transport protein Sec24D yes no 0 0 0 1 0 1 33.567 33.567 2 1.7097E-13 7407 20230619_1880_Aki_TMTPro18x_K_F1 223.36 190.52 38573 15666 37913 41474 55533 89066 52980 71058 89296 44232 56723 106040 100970 86777 39914 50173 121090 121850 35550 14593 38898 40310 56516 85879 54678 73048 87497 48116 61910 103980 98848 88277 46177 54990 115080 114970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53588000 5955 2096 5640 11221 9051 9051 1 9606 Homo sapiens -0.046138831921098244 EEQMDGTVTLK Unmodified 1249.586 0.58601761 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;F5GWI0;B7Z859 DDB1 DNA damage-binding protein 1 yes no 0 0 0 3 0 1 47.995 48.074 2 0.0012865 13335 20230619_1882_Aki_TMTPro18x_K_F3 110.14 70.091 12142 11745 9543.4 11173 11136 9687.4 14376 10706 16299 14390 17632 14559 17056 13906 10786 17943 18447 16632 11220 10744 9944.3 11319 11513 9949.6 14353 10979 16535 14358 17971 14769 17130 14581 11540 17871 17563 15818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71966000 5956 1710 5641 11222 9052 9052 1 9606 Homo sapiens -0.028791953702466344 EEQSQITSQVTGQIGWR Unmodified 1945.9494 0.949368 853 Q96CW1;Q96CW1-2;A0A087WY71;B4E304;E9PFW3;B4DNB9;C9JPV8;C9JGT8;B4DJB1;H7C4C3;B4DFM1;C9JTK4;B4DTI4;B7Z4N2 AP2M1 AP-2 complex subunit mu yes no 0 0 0 7 0 1 54.239 54.303 3 3.315E-09 15473 20230619_1887_Aki_TMTPro18x_K_F7 128.18 114.46 33294 26583 29022 33075 29131 35553 34535 37049 46144 34769 36595 36723 46039 32069 38685 39519 39298 39000 30748 24394 29869 32902 30452 35786 34863 37678 45940 35341 38405 37046 46291 33659 39504 39564 37592 37049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21057000 5957 853 5642 11223 9053 9053 1 9606 Homo sapiens 0.014231288820610644 EERDDETDEPKPK Unmodified 1586.706 0.70600941 4208 Q8IX12-2;Q8IX12;A0A0C4DGG8;F5H1H2 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 0 0 2 2 0 1 34.079 34.135 4 0.0008996 7340 20230619_1881_Aki_TMTPro18x_K_F2 91.858 78.202 11142 6420.8 12531 12115 20447 22972 14333 18562 22716 11386 20708 29044 18590 24063 14671 12569 32721 41500 10295 5931.5 12730 11896 20465 22287 15071 19063 22539 12452 21295 28478 18933 24375 15972 14437 31194 39078 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15053000 5958 4208 5643 11224 9054 9054 1 9606 Homo sapiens -0.0638753556283973 EEREYEQDQSSSR Unmodified 1641.6867 0.68667095 1665 A0A7I2V4I5;Q5T200-2;Q5T200;Q32Q34;A0PJJ2 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 0 0 1 1 0 1 27.721 27.721 3 0.080574 5123 20230619_1880_Aki_TMTPro18x_K_F1 42.789 30.429 1060.9 0 1297.9 1083.2 3855.8 1609.2 2015.2 3000.3 2595.4 2074.1 2499.9 2326.9 2660.8 2713.1 1932.6 1268.1 2758.3 2368.5 976.7 0 1332.5 1011.5 3732.4 1623 2157.6 2938.9 2608.4 2152.9 2574.2 2362.8 2679.3 2709.3 2019.4 1362.2 2628.4 2239.3 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3411500 5959 1665 5644 11225 9055 9055 1 9606 Homo sapiens -0.10850491853693711 EESAADWALYTYEDGSDDLK Unmodified 2276.9597 0.95971749 1396 A0A2Z6ATB6;Q16643;Q16643-3;D6R9W4;D6RFI1 DBN1 Drebrin yes no 0 0 0 1.5 0.5 1 1 62.91 62.915 3 2.3665E-08 19946 20230619_1881_Aki_TMTPro18x_K_F2 116.6 107.32 52022 39386 52530 65102 43301 56375 45303 52885 58270 56862 55618 56490 52451 56835 59620 60984 58748 78594 48085 36270 53255 63462 45852 57536 46013 54387 58531 57255 57074 57377 54058 58816 60467 62194 56355 74389 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 198360000 5960 1396 5645 11226;11227 9056;9057 9056 2 9606 Homo sapiens -0.12768397764693873 EESAASGGAAYTK Unmodified 1240.5572 0.55716033 1525;3803 Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4;A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 no no 0 0 0 3 0 1 38.593 38.646 2 1.4221E-05 9033 20230619_1882_Aki_TMTPro18x_K_F3 130.01 112.68 13270 5979.9 15139 16904 20467 32516 18600 24073 20276 19085 28192 35655 24882 30525 24701 8350.7 34727 37195 12250 5574.3 15328 16344 20863 31444 18933 25021 20860 20063 28460 35202 25559 30476 25580 10421 33147 35013 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18087000 5961 3803;1525 5646 11228 9058 9058 1 9606 Homo sapiens -0.05349596675068824 EESDDEAAVEEEEEEK Unmodified 1865.7174 0.71742154 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;A0A7P0TBC2 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 1 0 1 46 46 3 4.4607E-11 12620 20230619_1880_Aki_TMTPro18x_K_F1 152.88 145.92 20595 15935 18593 23275 24235 37846 21364 26606 54290 34015 41049 70359 51974 56995 35657 79803 74962 122850 19022 14651 19179 23065 24817 36865 22713 28150 52851 35147 43382 69300 52075 60425 38977 82060 71674 116060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205110000 5962 3452 5647 11229 9059 9059 1 9606 Homo sapiens -0.18080847840633396 EESEAEAPR Unmodified 1016.4411 0.44106794 2830 D3DVC4;P48681;Q2YDX4;Q9H6U9 NES Nestin yes no 0 0 0 1 0 1 29.532 29.532 2 0.0015344 5819 20230619_1880_Aki_TMTPro18x_K_F1 114.89 91.338 5374.7 966.03 6763.2 7295.7 8131.9 12739 11898 11628 15691 7952.5 9481 13624 11669 10576 13103 4649.5 11287 15572 4956.2 943.72 6788.8 6902.8 8469.5 12414 11882 11854 15493 8421.3 10150 13443 11912 10708 13151 5406.2 10847 14659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6023800 5963 2830 5648 11230 9060 9060 1 9606 Homo sapiens -0.06649495455087617 EESESTAVGQAHSDISK Unmodified 1773.8017 0.80170071 3790 Q02952-3;Q02952-2;Q02952 AKAP12 A-kinase anchor protein 12 yes no 0 0 0 2.5 0.5 1 1 38.994 39.06 3 1.3097E-23 9365 20230619_1881_Aki_TMTPro18x_K_F2 233.12 216.44 53955 36944 40168 43505 32247 49523 37918 37403 49701 60338 60146 84678 70179 71000 48100 85074 93387 108310 49734 33904 41860 43470 34446 49320 38292 39683 50440 60487 61792 84323 70388 74401 52007 86438 89018 102570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78194000 5964 3790 5649 11231;11232 9061;9062 9061 2 9606 Homo sapiens -0.054248074425686355 EESESVLTLK Unmodified 1133.5816 0.58158416 1092 A0A0S2Z4B5;Q08209;A0A0S2Z4C6;Q08209-2;Q08209-3;E7ETC2;Q08209-5;Q9UMM5;Q5F2F8;P16298-4;P16298-2;P16298-3;Q08209-4;P16298;B7Z781;Q5F2G0;B7Z6P2 PPP3CA;PPP3CB Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 3 0 1 51.678 51.744 2 0.077861 14976 20230619_1882_Aki_TMTPro18x_K_F3 60.892 18.605 38789 31913 41702 41632 38926 45367 43536 41783 50394 50367 50266 52533 52460 46349 47762 58071 58524 63956 35891 29296 42081 41294 40792 45502 43851 43171 50959 50514 51690 53023 53273 48638 49303 58462 55929 60663 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34094000 5965 1092 5650 11233 9063 9063 1 9606 Homo sapiens 0.020136634784648777 EESGKPGAHVTVK Unmodified 1337.6939 0.69392858 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28;A0A087WUI2;I6L957;A0A7I2V4N0;A0A7I2YQN4 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 1 7 0.816 1 1 1 35.761 35.801 4 4.933E-08 7599 20230619_1887_Aki_TMTPro18x_K_F7 164.93 100.63 1345600 798590 1537200 1645100 2121500 2149800 1754100 1858300 1676900 1600500 1973300 2115100 1949600 1521000 1598900 1032400 2210500 2049500 1243500 738660 1554700 1596600 2145000 2127700 1788400 1911400 1724700 1646600 2010300 2101400 1973200 1564700 1662300 1104200 2108000 1936500 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5558200000 5966 3491 5651 11234;11235;11236 9064;9065;9066;9067;9068 9066 5 9606 Homo sapiens 0.03858937275322205 EESGVSVSNSQPTNESHSIK Unmodified 2114.9716 0.97161958 1329 A0A220K8H0;Q99808;Q99808-2 SLC29A1 Equilibrative nucleoside transporter 1 yes no 0 0 0 3 0 1 38.331 38.384 3 1.4906E-22 8936 20230619_1882_Aki_TMTPro18x_K_F3 182.49 165.99 9818.6 9583.8 7434.3 9513.2 5676.3 6980.3 5864.1 5326.7 12130 14825 13307 21452 20280 15331 8934.3 29336 27563 33439 9071.6 8770.3 7734.2 9581.6 6066.7 7221.8 6098.1 5822 12072 14672 13939 21263 19949 16768 10428 29409 26233 31696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18032000 5967 1329 5652 11237 9069 9069 1 9606 Homo sapiens -0.04126736230819006 EESLADDLFR Unmodified 1193.5564 0.55643205 1813 O60934;A0A8V8TM88;A0A8V8TM80;A6H8Y5;A8K1D3;A0A8V8TKW6;A0A8V8TMH1;A0A0C4DG07;A0A087X1V5 NBN Nibrin yes no 0 0 0 1 0 1 58.173 58.173 2 0.045664 17753 20230619_1880_Aki_TMTPro18x_K_F1 74.424 56.56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5968 1813 5653 11238 9070 9070 1 9606 Homo sapiens -0.032603913241018745 EESQIPVDEVFFHR Unmodified 1730.8264 0.82639932 2225 B2R5U7;Q03701 CEBPZ CCAAT/enhancer-binding protein zeta yes no 0 0 0 2.5 0.5 1 1 55.651 55.682 3 6.7081E-07 16625 20230619_1882_Aki_TMTPro18x_K_F3 132.06 106.59 128330 105690 129770 140310 135730 145440 136420 146510 157590 160020 156960 164870 166970 139650 162390 181130 173480 176520 118680 97042 131850 138900 140520 146700 138230 149940 159400 161120 161580 166300 169870 147080 165920 181040 165900 167700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259530000 5969 2225 5654 11239;11240 9071;9072 9072 2 9606 Homo sapiens -0.00978082778578937 EESREPAPASPAPAGVEIR Unmodified 1961.9807 0.98066813 1217 Q6DEN2;A0A140VK07;Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 1 3 0 1 39.418 39.473 3 6.002799999999999E-40 9364 20230619_1882_Aki_TMTPro18x_K_F3 263.9 227.71 82054 70807 87790 93401 84203 89101 83014 78163 75880 120110 98373 98521 128410 89803 90513 130020 107680 105120 75943 64996 88666 92393 87637 90197 83612 81755 78880 118410 101160 100700 128170 95123 93872 128500 102850 100120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196120000 5970 1217 5655 11241 9073 9073 1 9606 Homo sapiens 0.03815701916164471 EESSELEQPFAQDTSSVGPDR Unmodified 2307.0139 0.013878328 2020;3876 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;Q14151;A0PJ47 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 0 1 0 1 51.534 51.534 3 1.1625E-26 14979 20230619_1880_Aki_TMTPro18x_K_F1 203.17 193.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5971 2020;3876 5656 11242 9074 9074 1 9606 Homo sapiens -0.08734805613039498 EESSELEQPFAQDTSSVGPDRK Unmodified 2435.1088 0.10884135 2020;3876 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;Q14151;A0PJ47 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 1 1 0 1 48.83 48.83 3 1.8838000000000002E-30 13891 20230619_1880_Aki_TMTPro18x_K_F1 196.3 181.94 10314 7815.5 9540.4 11112 6021.8 12589 10542 10284 18234 14157 13365 20360 22415 23545 8627.3 34180 29846 39639 9526.7 7183.7 9720.8 10963 6718.9 12546 10600 10774 17940 14311 14364 20512 21997 24730 10331 34392 28420 37556 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15398000 5972 2020;3876 5657 11243 9075 9075 1 9606 Homo sapiens -0.05130872141853615 EESSGTPAHQMNLR Unmodified 1555.7049 0.70490397 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 3 0 1 32.807 32.878 3 1.009E-28 6728 20230619_1882_Aki_TMTPro18x_K_F3 197.36 171.64 7461.5 6312.7 7803.8 10079 10495 9499.7 9049.9 9360.2 12020 10059 10015 13900 14537 11371 9576.3 15929 17543 19119 6903.5 5808.1 7950 9852.9 10637 9648.3 9299.3 9595.4 12001 10248 10589 13848 14462 12061 10300 16089 16719 18120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56997000 5973 385 5658 11244 9076 9076 1 9606 Homo sapiens -0.05072028412701002 EESSYILESNRK Unmodified 1453.7049 0.7048872 4149 Q7L099-4;Q7L099-3;B4DG59;B4DKC2;Q7L099;Q7L099-2 RUFY3 Protein RUFY3 yes no 0 0 1 4 0 1 42.243 42.286 3 0.00016401 10560 20230619_1883_Aki_TMTPro18x_K_F4 105.65 91.746 43004 32806 42839 49975 45730 40511 42989 51723 52464 54311 69346 75087 58126 54206 44617 69280 72516 71082 39747 30178 43599 48922 47132 41950 43846 52135 53568 55343 69871 74579 59092 57359 47286 69403 69103 67500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95830000 5974 4149 5659 11245 9077 9077 1 9606 Homo sapiens -0.0038170514105786424 EESVEAVK Unmodified 889.43928 0.43927702 2830 D3DVC4;P48681 NES Nestin yes no 0 0 0 2 0 1 41.549 41.626 2 0.035637 10580 20230619_1881_Aki_TMTPro18x_K_F2 75.043 30.908 49807 28169 42228 56764 52327 78440 64142 73043 90216 71586 78226 99191 95215 89628 58369 100240 119700 132990 45908 26052 43807 55180 54097 77428 64772 74918 89896 73311 81652 99093 95025 93328 63617 102250 114030 125920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17261000 5975 2830 5660 11246 9078 9078 1 9606 Homo sapiens -0.009865044730418049 EESWESGR Unmodified 978.40429 0.4042885 4568 Q9NQ29-3;Q9NQ29;Q53G47;D3DU41;B8ZZ08 LUC7L Putative RNA-binding protein Luc7-like 1 yes no 0 0 0 1 0 1 36.465 36.465 2 0.00059207 8554 20230619_1880_Aki_TMTPro18x_K_F1 160.52 115.82 85986 64694 81628 87615 77920 97548 80724 85469 112600 120080 121250 123360 119800 101090 105400 102070 147430 119210 79436 59433 83268 86702 81468 97573 82258 89062 113300 119600 123920 124230 121660 105100 109710 103540 140460 113150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80459000 5976 4568 5661 11247 9079 9079 1 9606 Homo sapiens -0.0857774728098093 EESWGPPR Unmodified 956.43519 0.4351947 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 3 0 1 40.783 40.842 2 0.010772 9990 20230619_1882_Aki_TMTPro18x_K_F3 97.798 83.802 46620 31016 50024 54300 64031 63987 61025 67326 78751 47207 59834 54895 56976 53070 76301 48719 67557 68193 43084 28601 50765 53018 65283 64016 62247 67990 78353 49078 62164 55353 59191 54583 76609 50208 64727 64562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24851000 5977 3152 5662 11248 9080 9080 1 9606 Homo sapiens -0.044765491760927034 EETAGSYDSR Unmodified 1113.4574 0.45744628 1901 A0RZB8;Q6URC4;O60610-2;O60610-3;O60610;A0A1E1ERW3;A0A2R8Y5N1;A0A2R8YEF8 DIAPH1 Protein diaphanous homolog 1 yes no 0 0 0 1 0 1 31.439 31.439 2 1.0124E-06 6569 20230619_1880_Aki_TMTPro18x_K_F1 179.51 151.4 7465.7 4405.5 9724.8 9185.6 11364 15645 5068.7 12506 11090 9656.8 12792 24963 18477 20945 9179 7834.7 34153 34416 6908.6 4075.8 9710 8958 11540 15237 5691.2 12898 11031 10380 13361 24448 18300 21054 10862 9573.4 32438 32406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13641000 5978 1901 5663 11249 9081 9081 1 9606 Homo sapiens -0.09474414289002198 EETDKEEPASK Unmodified 1261.5674 0.56739066 2662 B5BUB5;P05455;Q14730 SSB Lupus La protein yes no 0 0 1 2 0 1 35.838 35.894 3 0.0029148 8037 20230619_1881_Aki_TMTPro18x_K_F2 79.659 65.401 10002 5211.9 18254 18482 33947 29705 21766 33753 19349 10162 24533 29411 12777 19441 29552 5609.5 29335 25822 9290.9 4882 18085 17698 33599 29258 22614 33531 20007 12106 24477 28623 14268 19627 29607 7071.4 28045 24325 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13712000 5979 2662 5664 11250 9082 9082 1 9606 Homo sapiens -0.05293033740485953 EETEELK Unmodified 876.40764 0.40764254 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356;A8WDG6 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 1 0 1 40.321 40.321 2 0.0010412 10249 20230619_1880_Aki_TMTPro18x_K_F1 173.59 45.108 104740 36880 114440 145580 168970 243940 123040 196640 177870 114100 207280 348920 175910 236500 161040 74865 350700 348730 96578 34752 116510 139030 170520 237660 128630 201800 178940 126900 210830 338990 180630 238960 173960 93457 333700 328330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123720000 5980 150 5665 11251 9083 9083 1 9606 Homo sapiens -0.035504972269791324 EETGQVLER Unmodified 1059.5197 0.51965261 245 B2R642;A8K6A6;A0A024R3I5;P43121;B3KXZ9;P43121-2 MCAM Cell surface glycoprotein MUC18 yes no 0 0 0 1.5 0.5 1 1 36.49 36.519 2 8.5666E-05 8571 20230619_1880_Aki_TMTPro18x_K_F1 157.96 87.688 211560 145940 194140 259640 199910 206650 249050 252680 338850 265780 292540 312900 306900 266540 252140 258290 349720 322450 195300 134580 199160 251960 208570 213920 250960 255420 337980 269440 303010 313780 310320 276090 262740 263300 333480 305680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252680000 5981 245 5666 11252;11253 9084;9085 9084 2 9606 Homo sapiens -0.007726431500032049 EETNEIQVVNEEPQRDR Unmodified 2083.977 0.97703931 2360 B3KNK9;Q8NBJ4-2;Q8NBJ4 GOLPH2;GOLM1 Golgi membrane protein 1 yes no 0 0 1 1 0 1 39.642 39.642 3 5.1543E-09 9954 20230619_1880_Aki_TMTPro18x_K_F1 101.67 84.789 9937.9 7293.3 8771.7 9158.8 8490.8 9820.7 8489.7 10286 10150 11168 12884 13002 12385 10765 11572 16894 22604 16197 9174.4 6695.5 9004.7 9106.3 8851 9889.7 8621.9 10495 10358 11290 13069 13053 12634 11498 12417 16821 21477 15415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16765000 5982 2360 5667 11254 9086 9086 1 9606 Homo sapiens -0.021590126482806227 EETPEVTK Unmodified 931.44984 0.44984171 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 2 0 1 39.629 39.699 2 0.00074441 9659 20230619_1881_Aki_TMTPro18x_K_F2 125.31 82.191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5983 630 5668 11255 9087 9087 1 9606 Homo sapiens -0.0186252181861164 EETPGQRPAVTETHQLAELNEK Unmodified 2476.2194 0.21939485 1230 Q9UQ35;A0A140VK53;Q9UQ35-2;I3L4D8;I3L182;Q9UQ39;Q05CV9;Q05BI2;I3L1I8;Q9UQ35-3;A0A087X1W1;I3L1C0 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 0 0 1 2.5 0.5 1 1 42.668 42.741 4 4.3986E-08 11125 20230619_1881_Aki_TMTPro18x_K_F2 111.13 94.834 33702 22678 33310 34530 38424 42987 45554 45078 47927 44415 43579 54842 56052 38463 40541 43737 60569 59933 31126 20872 33964 34000 39694 42854 45579 45883 48529 45227 45528 54592 56033 40558 42615 44760 57754 56755 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 317070000 5984 1230 5669 11256;11257 9088 9088 1 9606 Homo sapiens 0.0403339263698399 EETQPPVALK Unmodified 1110.5921 0.59208927 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 0 4 0 1 46.298 46.341 2 1.4842E-06 12295 20230619_1883_Aki_TMTPro18x_K_F4 172.59 119.88 101770 72889 79329 98847 95784 108690 103740 94419 129570 117630 130910 120140 143530 115740 106850 145210 146320 121780 93860 66976 82826 97764 98522 108820 104890 98103 130560 117780 134670 121790 144340 121090 111680 144030 139450 116000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110830000 5985 4246 5670 11258 9089 9089 1 9606 Homo sapiens 0.041216909235345156 EETQPPVALKK Unmodified 1238.6871 0.68705229 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 1 7 0.816 1 1 1 44.088 44.152 3 0.0019181 11315 20230619_1886_Aki_TMTPro18x_K_F6 84.479 64.64 425640 366700 424490 431780 514480 514040 529250 436070 492580 492030 589440 368950 439490 339210 525450 290310 337270 238730 393700 336220 432690 431810 527020 512000 531510 452560 507560 490610 592350 379490 456760 348510 521090 290560 323830 227650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 790780000 5986 4246 5671 11259;11260;11261 9090 9090 1 9606 Homo sapiens 0.07725624394720398 EETVNDPEEAGHR Unmodified 1481.6383 0.63826419 2138 A8K9K6;O00567;Q9BSN3 NOP56 Nucleolar protein 56 yes no 0 0 0 1 0 1 30.932 30.932 3 2.2448E-21 6321 20230619_1880_Aki_TMTPro18x_K_F1 225.97 221.25 17015 8686.6 15953 17967 20695 23329 17487 19173 28234 20912 22842 30751 26211 21724 19387 19784 30220 28611 15689 8041.9 16377 17430 21064 23069 18149 19919 27924 21355 23878 30422 26329 22612 20431 20408 28799 27087 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 421700000 5987 2138 5672 11262 9091 9091 1 9606 Homo sapiens -0.08328940702972432 EEVDRYR Unmodified 965.45666 0.45665842 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 1 1.5 0.5 1 1 30.217 30.252 3 0.0042338 5826 20230619_1881_Aki_TMTPro18x_K_F2 110.81 53.704 32761 23935 34312 37628 27892 31557 30013 35978 37639 35877 42030 46274 44367 35244 34935 36250 53672 45008 30285 22030 34644 36783 29551 32455 30414 36450 38079 36567 43033 46107 44758 36789 36724 36901 51112 42688 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39574000 5988 3833 5673 11263;11264 9092 9092 1 9606 Homo sapiens -0.02745164147381729 EEVEDLCR Unmodified 1048.4495 0.44952413 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 1 0 1 40.482 40.482 2 0.01247 10302 20230619_1880_Aki_TMTPro18x_K_F1 95.741 72.912 201790 112060 249610 255390 295170 308600 269980 278760 310920 209930 278750 317160 261390 253340 308640 215330 344040 277280 186590 103870 250290 246550 302080 307080 274990 285050 312770 219280 287140 314790 269850 261280 314410 220820 328370 262950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195270000 5989 3654 5674 11265 9093 9093 1 9606 Homo sapiens -0.07276264810138855 EEVGQYLKK Unmodified 1092.5815 0.58152458 4105 Q6GMV3 PTRHD1 Putative peptidyl-tRNA hydrolase PTRHD1 yes yes 0 0 1 8 0 1 46.731 46.78 3 0.045714 12200 20230619_1888_Aki_TMTPro18x_K_F8 52.49 18.623 42808 44764 47635 48279 60112 50458 61665 59397 60546 55280 57245 40706 43840 32606 63989 37376 36628 34653 39689 40985 48168 48533 61332 51123 62040 59942 61598 55632 58235 41742 46058 34187 63058 37423 35296 32949 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31829000 5990 4105 5675 11266 9094 9094 1 9606 Homo sapiens 0.038937082691290925 EEVLPVGK Unmodified 869.48583 0.48583328 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 4 0 1 48.124 48.164 2 0.0058911 13142 20230619_1883_Aki_TMTPro18x_K_F4 112.17 66.541 43745 33906 33362 42910 29804 46958 35803 36510 59549 58788 52466 57263 70999 54699 29627 80889 74776 83094 40357 31123 34772 42622 31590 46904 36481 38619 59072 58205 54934 58133 69923 57932 33633 80813 71166 78870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34419000 5991 3588 5676 11267 9095 9095 1 9606 Homo sapiens 0.04586980148917519 EEVMEPPLEEESLEAK Oxidation (M) 1873.8503 0.85029038 2830 D3DVC4;P48681;Q2YDX4;Q9H6U9 NES Nestin yes no 0 1 0 1 0 1 53.44 53.44 3 3.5383E-06 15795 20230619_1880_Aki_TMTPro18x_K_F1 112.96 96.782 79017 55423 66011 67696 67454 85262 90781 100380 120490 106780 102860 96408 114860 82138 88264 120100 115550 112390 72901 50876 68202 67620 70738 85191 91080 101590 120340 107260 106800 97919 115510 87281 91901 119540 110270 106840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122080000 5992 2830 5677 11268 9096;9097 9097 1691 2 9606 Homo sapiens -0.05168074917673948 EEVMEPPLEEESLEAK Unmodified 1857.8554 0.85537576 2830 D3DVC4;P48681;Q2YDX4;Q9H6U9 NES Nestin yes no 0 0 0 1.5 0.5 1 1 57.697 57.705 3 0.0002715 17594 20230619_1880_Aki_TMTPro18x_K_F1 87.148 76.204 48145 43553 49297 52931 56374 61153 64530 67132 73096 79153 57039 62209 63611 53953 67198 71427 63749 69946 44557 39939 50120 52804 58203 61355 64842 68450 73433 78810 59625 63596 64889 56870 68104 71401 61071 66428 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268640000 5993 2830 5677 11269;11270 9098 9098 1 9606 Homo sapiens -0.0392377105504238 EEVNDRPVR Unmodified 1112.5574 0.5574351 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DM27 PRRC2C Protein PRRC2C yes no 0 0 1 1.5 0.5 1 1 28.15 28.187 3 0.00026912 4967 20230619_1881_Aki_TMTPro18x_K_F2 114.5 93.595 35254 16115 35814 41489 41280 53825 40700 43659 57330 37868 49269 49798 50549 42591 38346 26785 57756 46962 32513 14990 36461 39907 42524 53180 41584 45146 57063 38992 50966 49732 50986 43363 40204 28348 54998 44431 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34529000 5994 2894 5678 11271;11272 9099;9100 9100 2 9606 Homo sapiens 0.0056586783548482344 EEVNETYGDGDGR Unmodified 1439.5801 0.58008061 903 Q9H3X2;Q96T14;Q86XV5;H0Y873;Q8N8Q2;D3DX07;Q6ZNF7;A0A090N7Y0;Q96P47-5;Q96P47;Q96P47-2;Q96P47-4 DKFZp761E2216;AGAP3;CENTG3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 yes no 0 0 0 1 0 1 36.25 36.25 2 2.7079E-15 8482 20230619_1880_Aki_TMTPro18x_K_F1 208.72 169.7 11932 6410.3 11320 14348 11257 16325 11636 14491 16753 16271 20262 24937 29434 27570 14761 18987 36652 40595 11005 5940.9 11571 13842 11750 16289 11880 14976 16920 16623 21035 24991 29091 27921 16496 20411 34884 38314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24831000 5995 903 5679 11273 9101 9101 1 9606 Homo sapiens -0.12212622348260993 EEVSSWR Unmodified 891.40865 0.4086456 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 2 0 1 39.525 39.595 2 0.011287 9610 20230619_1881_Aki_TMTPro18x_K_F2 103.91 75.653 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5996 3152 5680 11274 9102 9102 1 9606 Homo sapiens -0.041402380674185224 EEVTELLAR Unmodified 1058.5608 0.56078914 2873 E5KT65;P19388;B4DJ89;A0A087WWX0;A0A087WVZ9;A0A0A0MQR7 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes no 0 0 0 3 0 1 53.015 53.074 2 7.5582E-07 15514 20230619_1882_Aki_TMTPro18x_K_F3 147.19 88.268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5997 2873 5681 11275 9103 9103 1 9606 Homo sapiens 0.03385117889479261 EEVVLLTHGDSVDK Unmodified 1539.7781 0.77805214 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 2 1 1 1 50.022 50.059 3 1.1512E-11 14131 20230619_1882_Aki_TMTPro18x_K_F3 174.47 145.71 186220 147980 155140 167600 151310 193460 175240 186390 212280 216190 196230 193590 225630 184160 166530 224830 203710 199650 171920 135670 160230 168030 158460 193470 176480 191630 213640 216220 203280 197250 226510 192450 172750 223710 194520 189910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 459390000 5998 1182 5682 11276;11277 9104;9105 9105 2 9606 Homo sapiens 0.02975423581551695 EEYEAHQDR Unmodified 1175.4843 0.48432973 1303 B4DVB5;A0A1U9X8F2;A0A1U9X8F1;Q06587;A0A024RCR9;B4DW57;Q06587-2 RING1 E3 ubiquitin-protein ligase RING1 yes no 0 0 0 1 0 1 26.448 26.448 3 0.00071667 4692 20230619_1880_Aki_TMTPro18x_K_F1 94.692 87.804 3700.4 1534.6 4012.5 4604.9 6343.4 4979.2 3970.1 3744.9 4258.6 2253.1 4371 5590.4 6474.3 3727.2 3575.5 2322 5978.5 4991.8 3413.5 1433.3 4085 4394.7 6324.2 4977.6 4150.6 3876.5 4322.3 2461.8 4576.3 5455.1 6392.2 3841.5 3811 2510 5690.1 4716.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1925800 5999 1303 5683 11278 9106 9106 1 9606 Homo sapiens -0.0963930567781972 EEYEGPNK Unmodified 964.41379 0.41379055 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 1.33 0.471 2 1 38.278 38.309 2 0.001186 9044 20230619_1881_Aki_TMTPro18x_K_F2 147.06 96.933 46487 17946 59622 66766 94908 110350 82028 100080 81617 63476 90492 131330 93986 99361 99565 36175 123710 123080 42944 16867 60067 63860 95432 107890 83478 101910 83461 68169 92896 128910 96223 100200 102110 42458 118130 115990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65657000 6000 1450 5684 11279;11280;11281 9107;9108 9108 2 9606 Homo sapiens -0.06983978995469897 EEYGFLPVPLR Unmodified 1318.6921 0.69213767 4243 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 yes yes 0 0 0 7 0 1 62.067 62.103 2 0.03969 18739 20230619_1887_Aki_TMTPro18x_K_F7 74.376 44.567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6001 4243 5685 11282 9109 9109 1 9606 Homo sapiens 0.04553928257359985 EEYQLVQVEQK Unmodified 1391.6933 0.69325988 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 3.29 1.03 2 2 2 1 51.21 51.262 2;3 1.7392E-08 14701 20230619_1882_Aki_TMTPro18x_K_F3 202.03 156.67 131680 105540 119270 132340 109640 127640 134390 136000 156030 154530 147230 144640 182110 143000 133940 201630 181800 166000 121650 96850 122140 131390 115410 129610 134760 138860 157440 154890 152930 147350 182440 150680 140060 199470 173380 158110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1021199999.9999999 6002 1748 5686 11283;11284;11285;11286;11287;11288;11289 9110;9111 9111 2 9606 Homo sapiens 0.013080978356356354 EFADSLGIPFLETSAK Unmodified 1723.8669 0.86686715 3725;4495 Q5U0I6;P62820;B7Z8M7;E7END7;P62820-2;Q96RD8;Q9H0U4;E9PLD0;Q6FIG4;Q92928 RAB1A;RAB1B;RAB1C Ras-related protein Rab-1A;Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C no no 0 0 0 5 2.16 1 1 1 1 1 1 64.495 64.519 3 4.5107E-08 19719 20230619_1888_Aki_TMTPro18x_K_F8 125.73 97.758 98539 82514 95678 97033 79530 98599 93428 96174 116440 116100 118390 131980 125440 109640 120260 133790 115920 130220 91108 75662 97202 96849 84387 99523 94156 98964 117410 116740 121780 132470 127560 115080 122220 133830 111050 123670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3015599999.9999995 6003 3725;4495 5687 11290;11291;11292;11293;11294;11295 9112;9113 9113 2 9606 Homo sapiens 0.03388838821229001 EFAGEDTSDLFLEER Unmodified 1756.7792 0.77917435 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2V2H0;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V488;B7ZB16;B4DR01;B3KWD0 XPO1 Exportin-1 yes no 0 0 0 2 0.816 1 1 1 60.144 60.157 2 3.58E-63 18557 20230619_1880_Aki_TMTPro18x_K_F1 318.57 295.99 103980 80095 87840 102280 76218 101300 93345 93785 110730 114610 124340 138960 144370 125750 116990 162910 165590 192880 95993 73528 90502 101430 80749 102290 93699 96925 112390 115460 127880 139550 145480 132140 122380 164620 158150 182780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 128130000 6004 3228 5688 11296;11297;11298 9114;9115 9114 2 9606 Homo sapiens -0.06894406840206102 EFAILHQNLK Unmodified 1211.6663 0.66625727 4378 Q96L92-3;Q96L92;A0A2R8Y8A7;A0A5H1ZRP6;Q96L92-2 SNX27 Sorting nexin-27 yes no 0 0 0 1 0 1 50.776 50.776 3 0.0029478 14669 20230619_1880_Aki_TMTPro18x_K_F1 87.066 53.837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6005 4378 5689 11299 9116 9116 1 9606 Homo sapiens 0.06889078805738791 EFAQIIK Unmodified 847.48035 0.48035398 3406 P07954-2;A0A804HI24;A0A0S2Z4C3;P07954 FH Fumarate hydratase, mitochondrial yes no 0 0 0 7.5 0.5 1 1 53.723 53.792 2 0.007829 15238 20230619_1887_Aki_TMTPro18x_K_F7 128.57 34.304 427180 331010 356100 402890 444370 458670 470340 463630 580410 450880 488920 446360 514810 415890 466570 527200 499010 469930 394320 303720 369260 401720 455360 459780 475940 472930 581020 456500 506760 452690 522210 435920 477410 524650 476930 447050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 731050000 6006 3406 5690 11300;11301 9117;9118 9117 2 9606 Homo sapiens 0.05051301357104876 EFARPEDCPR Unmodified 1275.5666 0.56661958 4040 Q5JSZ5;Q5H9R5 PRRC2B;DKFZp781F05101 Protein PRRC2B yes no 0 0 1 2 0 1 33.824 33.88 3 0.031717 7227 20230619_1881_Aki_TMTPro18x_K_F2 60 34.563 43870 26105 42284 46073 51473 55824 49915 52319 62017 45965 54362 57696 57889 49113 48807 51991 65430 55637 40484 24088 43246 44980 52710 55595 50792 53517 62138 47182 56303 57748 58558 51093 50718 52403 62375 52842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12786000 6007 4040 5691 11302 9119 9119 1 9606 Homo sapiens -0.060141068705206635 EFCAFSQTLQPQNR Unmodified 1724.7941 0.79405333 4110 Q6IN85;G3V5A2;H0YIY8;G3V5Z3;A0A024R6M2;Q6IN85-5;Q6IN85-4;Q6IN85-2 SMEK1;KIAA2010 Serine/threonine-protein phosphatase 4 regulatory subunit 3A no no 0 0 0 4.5 3.5 1 1 54.102 54.102 2;3 1.4695E-08 16058 20230619_1880_Aki_TMTPro18x_K_F1 109.47 99.931 38485 31005 36335 37033 29717 40998 36630 37203 46158 47088 44343 47250 50632 44159 38649 54464 48872 51282 35566 28439 37002 36962 31662 41054 36840 38532 46431 47072 45862 47852 50923 46190 40165 54342 46679 48733 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15590000 6008 4110 5692 11303;11304 9120;9121 9120 2 9606 Homo sapiens -0.03935193453185093 EFCENLSADCR Unmodified 1399.5496 0.54964888 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6;A0A994J6A3 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 2 0.816 1 1 1 44.302 44.354 2 2.2304E-30 11840 20230619_1881_Aki_TMTPro18x_K_F2 275.13 229.45 375370 255400 297120 354570 305810 370120 357500 316210 392920 428720 421220 442530 442390 388090 355220 518740 521630 530390 346130 234800 308860 349940 318820 371730 358500 329970 399650 427690 431820 446800 446960 409010 372840 519300 497550 503610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 449180000 6009 1860 5693 11305;11306;11307 9122;9123 9123 2 9606 Homo sapiens -0.13414395538598 EFCQQEVEPMCK Oxidation (M) 1599.6367 0.63674933 4350 Q96FW1;Q659F9;F5H6Q1;B4DPD5;F5GYN4;F5GYJ8;F5H3F0;B3KUV5;Q96FW1-2 OTUB1;DKFZp564E242 Ubiquitin thioesterase OTUB1 yes no 0 1 0 3 0.816 1 1 1 45.214 45.282 3 0.0016086 11999 20230619_1882_Aki_TMTPro18x_K_F3 76.522 66.197 85099 72624 85961 95938 102840 100500 100210 100130 99379 88860 114160 97025 109620 84908 87212 129970 132180 127140 78717 66668 87550 95014 105280 101290 101200 102040 101830 90660 116100 97904 110950 90399 91795 129570 126000 120800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 371680000 6010 4350 5694 11308;11309;11310 9124 9124 2743 1 9606 Homo sapiens -0.13908357379204972 EFCQQEVEPMCK Unmodified 1583.6418 0.64183471 4350 Q96FW1;Q659F9;F5H6Q1;B4DPD5;F5GYN4;F5GYJ8;F5H3F0;B3KUV5;Q96FW1-2 OTUB1;DKFZp564E242 Ubiquitin thioesterase OTUB1 yes no 0 0 0 3.5 0.5 1 1 49.46 49.516 3 6.2987E-05 13743 20230619_1883_Aki_TMTPro18x_K_F4 116.01 96.433 332320 280680 370030 332340 314350 352850 370950 357450 390200 378660 457660 435620 450810 398820 391900 511120 525490 523180 307640 257380 371690 331850 332340 355400 371530 365500 398960 383300 465900 438780 457740 418460 407580 512120 501480 496800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 704740000 6011 4350 5694 11311;11312 9125;9126 9126 2 9606 Homo sapiens -0.1266405351659614 EFDEDSEDR Unmodified 1140.4207 0.42072643 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;A0A0S2Z5W9;Q9UHD8-4;Q9UHD8-8;Q9UHD8-9;A0A6Q8PHC2 SEPT9 Septin-9 yes no 0 0 0 1 0 1 36.74 36.74 2 1.9317E-17 8663 20230619_1880_Aki_TMTPro18x_K_F1 257.96 233.04 72814 32503 73693 88178 83327 100120 97416 95786 120050 96802 140150 158140 135130 128560 111320 60768 153730 154970 67145 30273 75046 84497 86253 100090 98095 98223 121650 99683 142710 156530 137040 130050 115660 67618 146680 146190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89615000 6012 541 5695 11313 9127 9127 1 9606 Homo sapiens -0.1438671090556909 EFDEDSEDRLVNEK Unmodified 1723.7537 0.75368788 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;A0A0S2Z5W9;Q9UHD8-4;Q9UHD8-8;Q9UHD8-9;A0A6Q8PHC2 SEPT9 Septin-9 yes no 0 0 1 1.5 0.5 1 1 47.012 47.05 3 3.6184E-07 13118 20230619_1880_Aki_TMTPro18x_K_F1 140.45 132.48 304720 237400 274540 280860 254570 288260 336380 324620 340200 397020 406060 389740 449920 367290 374720 463970 371630 401030 281450 217760 281190 280300 268250 291790 334580 331040 349230 397010 415300 395390 454030 384710 382710 460940 355810 381460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1120100000 6013 541 5696 11314;11315 9128 9128 1 9606 Homo sapiens -0.07923881362626162 EFDELNPSAQR Unmodified 1304.5997 0.59969384 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 0 0 2 0.816 1 1 1 46.784 46.836 2 1.2054E-07 12927 20230619_1881_Aki_TMTPro18x_K_F2 169.76 152.44 190550 165170 187950 201100 219950 223780 228420 217840 283480 234090 257530 239160 284390 236660 227950 285040 254540 261210 176240 151490 191690 200450 226080 224500 231460 223410 284510 236010 266440 242660 286690 246750 234570 284180 243330 248330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 451430000 6014 1076 5697 11316;11317;11318 9129;9130 9129 2 9606 Homo sapiens -0.04042201546826618 EFDMILGK Oxidation (M) 967.46847 0.46846866 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2 NUP93 Nuclear pore complex protein Nup93 yes no 0 1 0 5.5 0.5 1 1 57.876 57.938 3 0.023987 17069 20230619_1885_Aki_TMTPro18x_K_F5 62.464 53.25 53242 46522 52555 51462 53538 58937 55997 55634 64840 58724 60302 60701 64662 47934 60137 66484 59095 65861 49247 42629 53451 51688 55607 58971 56602 57146 65372 59249 62280 61114 65590 50879 61212 66456 56598 62536 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56785000 6015 4222 5698 11319;11320 9131;9132 9131 2704 2 9606 Homo sapiens -0.01656683448379681 EFDMILGK Unmodified 951.47355 0.47355404 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 6 0 1 61.618 61.673 3 0.074554 18872 20230619_1886_Aki_TMTPro18x_K_F6 40.002 12.381 15053 14544 16874 13973 13685 16970 14549 17544 20833 13701 16769 17032 17939 15745 15769 17931 16673 18197 13949 13306 16924 14217 14512 16948 14827 17770 20679 14167 17446 17108 18173 16395 16135 17994 15955 17275 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27785000 6016 4222 5698 11321 9133 9133 1 9606 Homo sapiens -0.004123795857708501 EFDPTITDASLSLPSR Unmodified 1747.8628 0.8628444 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;C9J813;Q6PJM5;Q6P707;Q05DR4 CALD1 Caldesmon yes no 0 0 0 4.2 0.748 1 2 2 60.664 60.691 2;3 1.4771999999999998E-19 18588 20230619_1883_Aki_TMTPro18x_K_F4 209.56 196.42 61892 47609 59165 73179 79304 88484 80394 80458 100010 75354 71042 65806 78651 67410 74342 82917 74722 77778 57188 43798 60728 71943 80848 88088 81558 82601 99579 76207 74557 67341 79842 70306 75742 82765 71511 73917 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 249860000 6017 3798 5699 11322;11323;11324;11325;11326 9134;9135 9134 2 9606 Homo sapiens 0.01882749327523925 EFDQLTPEESQAR Unmodified 1548.7056 0.70561548 3193 Q96D15;M0QZH0;M0QYB8 RCN3 Reticulocalbin-3 yes no 0 0 0 1 0 1 47.127 47.127 2 5.2011E-11 13178 20230619_1880_Aki_TMTPro18x_K_F1 221.09 189.16 23860 17748 20549 19844 20505 23634 23723 22290 26679 28531 31681 31516 31809 32364 32744 38598 33213 38187 22025 16274 21146 19928 21407 23584 23827 23032 27216 28596 32281 31906 32540 33659 33341 38647 31808 36257 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24669000 6018 3193 5700 11327 9136 9136 1 9606 Homo sapiens -0.04678910491998067 EFEDDLVK Unmodified 993.46549 0.46549177 2131 A8K946;O43148;O43148-2;Q05D80;K7EPP5;Q05DQ2 RNMT mRNA cap guanine-N7 methyltransferase yes no 0 0 0 1 0 1 52.836 52.836 2 0.0039729 15515 20230619_1880_Aki_TMTPro18x_K_F1 112.94 68.806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6019 2131 5701 11328 9137 9137 1 9606 Homo sapiens -0.03150235301563953 EFEDPRDAPPPTR Unmodified 1525.7161 0.71612058 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-3 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 1 2.5 0.5 1 1 38.78 38.84 3 0.025543 9252 20230619_1881_Aki_TMTPro18x_K_F2 49.31 30.067 215360 179900 206270 207840 235170 240340 218460 236540 272690 264540 281370 235010 269760 225230 242490 265510 260860 261800 199090 164940 210690 208100 241500 240580 223010 242550 275110 264990 287420 239760 274350 234840 248210 265910 249420 248690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 594500000 6020 33 5702 11329;11330 9138 9138 1 9606 Homo sapiens -0.025708830469284294 EFEDRDR Unmodified 965.42027 0.42027292 417;2099 A0A024R6X2;Q13951;J3KS23;A0A494C0A9;A8K719;Q13951-2 CBFB Core-binding factor subunit beta no no 0 0 1 1 0 1 29.164 29.164 3 0.0023285 5667 20230619_1880_Aki_TMTPro18x_K_F1 135.84 95.27 143750 63066 142940 165200 255550 295510 242320 259810 331530 204230 267580 265240 258330 220480 226470 100160 299700 254230 132530 58702 147180 159870 256420 287790 247670 266210 329650 211510 277060 264710 262510 222760 234140 111670 285730 240010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120580000 6021 417;2099 5703 11331 9139 9139 1 9606 Homo sapiens -0.06382041044093967 EFEEDLTGIDDR Unmodified 1437.626 0.62596817 3420 P09455;A0A0A0MQT0;A0A0A0MTB9;H0YAK8;P09455-2;P09455-3 RBP1 Retinol-binding protein 1 yes no 0 0 0 1 0 1 54.541 54.541 2 5.3471999999999994E-40 16212 20230619_1880_Aki_TMTPro18x_K_F1 292.2 250.33 190140 145660 154050 192860 129160 174590 203820 198110 252050 187610 208840 261270 211390 182990 231680 234020 245120 284690 175470 133780 159430 190620 138530 178350 202580 200600 252010 192450 216840 259110 216700 194040 236000 237160 234670 269720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1057799999.9999999 6022 3420 5704 11332 9140 9140 1 9606 Homo sapiens -0.07533977166031036 EFEEDLTGIDDRK Unmodified 1565.7209 0.72093119 3420 P09455;A0A0A0MQT0;A0A0A0MTB9;H0YAK8;P09455-2;P09455-3 RBP1 Retinol-binding protein 1 yes no 0 0 1 1.8 0.748 2 2 1 51.527 51.558 3;4 3.4885E-21 14954 20230619_1880_Aki_TMTPro18x_K_F1 220.19 198.84 2410700 2141600 2160100 2202500 1728700 1906100 2762600 2691800 2493900 2534900 2663600 2682700 2738000 2878500 2029700 3854300 2290800 3296100 2228400 1961000 2209500 2217900 1856600 1969000 2717400 2691700 2562100 2574000 2727800 2726800 2762300 3010900 2101600 3820600 2196300 3132900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4430600000 6023 3420 5705 11333;11334;11335;11336;11337 9141;9142;9143;9144 9141 4 9606 Homo sapiens -0.039300436948451534 EFEEESKQPGVSEQQR Unmodified 1905.8704 0.87044898 317 A0A024R534;O94776 MTA2 Metastasis-associated protein MTA2 yes no 0 0 1 1.67 0.471 1 2 39.592 39.638 3;4 3.6389E-11 9620 20230619_1881_Aki_TMTPro18x_K_F2 159.69 143.39 356490 307490 366320 337860 536800 554890 496290 462740 476240 414350 448110 336200 383210 277150 451360 279670 302450 211050 329820 281750 373710 341670 542500 542650 501960 477600 485080 419090 457700 343020 395830 288150 448570 277850 290190 201520 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 251030000 6024 317 5706 11338;11339;11340 9145;9146;9147;9148 9147 4 9606 Homo sapiens -0.04625143142880006 EFEFSQLPLK Unmodified 1236.639 0.63903946 4014 Q549N5;Q9Y5M8;H7C4H2 SRPRB Signal recognition particle receptor subunit beta yes no 0 0 0 7 0 1 61.962 62 3 0.001581 18691 20230619_1887_Aki_TMTPro18x_K_F7 98.055 64.646 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6025 4014 5707 11341 9149 9149 1 9606 Homo sapiens 0.03018550474712356 EFENPEVPREDQQQQHQQR Unmodified 2421.1058 0.10576207 577 A0A024R9J0;O60216;A0A8I5KWV3 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 0 1 1.5 0.5 1 1 35.324 35.352 4 5.0930999999999996E-39 7817 20230619_1881_Aki_TMTPro18x_K_F2 251.35 213.72 77081 66600 71373 82911 78752 89161 86623 84026 98483 92983 96081 94831 104930 85901 78429 92319 109840 108510 71256 61098 73166 82458 81466 89565 87242 86450 99567 93567 99039 95873 105560 89292 82023 93536 104780 102900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 275780000 6026 577 5708 11342;11343 9150;9151;9152 9152 3 9606 Homo sapiens -0.047946576853973966 EFEPLLNWMK Unmodified 1305.6427 0.64274463 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;B4DU71;B4DHT9;Q58FF2 HSP90B1;HEL-S-125m;TRA1;GRP94c Endoplasmin yes no 0 0 0 4.5 3.5 1 1 64.435 64.456 2;3 5.82E-06 19712 20230619_1888_Aki_TMTPro18x_K_F8 160.16 136.79 769380 711830 740940 746690 669190 936620 912490 930750 1067500 741260 663220 589210 644240 630290 917570 838890 791780 626460 711790 651820 754380 754160 709030 932200 910450 945850 1061600 755370 698850 607240 671860 659270 920820 828130 757640 597870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1520999999.9999998 6027 3452 5709 11344;11345 9153;9154 9154 2 9606 Homo sapiens 0.0021489697692231857 EFEPLLNWMK Oxidation (M) 1321.6377 0.63765925 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;B4DU71;B4DHT9;Q58FF2 HSP90B1;HEL-S-125m;TRA1;GRP94c Endoplasmin yes no 0 1 0 7 0 1 62.684 62.719 3 9.4838E-05 19049 20230619_1887_Aki_TMTPro18x_K_F7 125.71 92.625 405740 332480 342230 406500 462540 419020 466050 469620 532390 379910 361090 343330 333010 296640 414770 420110 359650 363770 374690 305010 355050 404630 470490 424160 471530 473840 531430 387830 377410 348890 344790 313950 417330 417030 344670 346090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 520440000 6028 3452 5709 11346 9155 9155 2098 1 9606 Homo sapiens -0.010294068857092498 EFEQLRK Unmodified 948.50288 0.50288033 2653 B4E343;Q9BVJ6;Q9BVJ6-3;Q9BVJ6-2;X6RJY0 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 0 0 1 6.5 0.5 1 1 41.762 41.845 3 0.069448 10027 20230619_1887_Aki_TMTPro18x_K_F7 53.17 28.835 64764 52881 66070 81255 85044 80282 85892 76153 95389 84469 84474 83292 88276 75177 82542 96847 97305 90304 59895 48637 67377 79656 86743 81169 86804 78353 96203 84917 87351 84363 89726 78954 84926 96568 92909 85866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113040000 6029 2653 5710 11347;11348 9156 9156 1 9606 Homo sapiens 0.026569007547209367 EFESVLVDAFSHVAR Unmodified 1704.8471 0.84713476 4574 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 0 0 7 0 1 63.649 63.681 3 3.0784E-14 19513 20230619_1887_Aki_TMTPro18x_K_F7 183.96 169.53 20711 17757 21003 25583 23843 24416 29180 23619 19093 20689 29677 29076 31421 23702 32791 32232 27455 31660 19159 16316 21386 25164 24635 24758 28796 24137 20437 21310 30040 28986 32043 25083 33024 32223 26350 30062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230050000 6030 4574 5711 11349 9157 9157 1 9606 Homo sapiens 0.022905076011056735 EFEVYGPIK Unmodified 1080.5492 0.54916182 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-3;M0QYR1 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 0 5.5 0.5 1 1 56.132 56.206 3 0.0015151 16554 20230619_1886_Aki_TMTPro18x_K_F6 93.551 76.225 63141 48929 56200 67964 55966 74596 67172 70148 77735 42204 43155 35469 43663 34805 50071 49358 40978 37113 58313 44958 57755 67125 58580 74765 67389 71225 77094 44012 45899 36370 44843 36692 50297 48688 39269 35394 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74504000 6031 33 5712 11350;11351 9158;9159 9159 2 9606 Homo sapiens 0.012109208661286175 EFEVYGPIKR Unmodified 1236.6503 0.65027285 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-3;M0QYR1 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 1 7.5 0.5 1 1 48.621 48.698 3 0.057601 13011 20230619_1888_Aki_TMTPro18x_K_F8 46.475 22.489 93304 104300 134720 113290 136390 131220 152970 109450 106930 109290 111400 84540 111250 67405 177560 84182 72234 66581 86790 95479 133300 113980 141560 130930 151810 113440 111760 109700 114100 86421 116380 71107 173050 83658 70092 63447 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174020000 6032 33 5713 11352;11353 9160 9160 1 9606 Homo sapiens 0.041413725688244085 EFFVGLSK Unmodified 925.49092 0.49091866 3364;2229 V9HW53;O95865;H0Y7N1;A0A140T971;Q5SSV3;Q5SRR8;B2R644;O94760;B4E3V1;B4DYP1;B4DGT0;O94760-2 HEL-S-277;DDAH2;DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2;N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 no no 0 0 0 5 3 1 1 60.097 60.121 2 0.0014855 17839 20230619_1888_Aki_TMTPro18x_K_F8 150.28 94.267 143970 125720 136530 130680 120650 133570 152320 149420 180910 172510 185500 176900 176530 159780 177810 190680 183250 208440 133120 115130 139050 131720 127470 135270 152650 152170 182810 173250 189670 178860 180580 167010 181170 192080 175460 197700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118150000 6033 3364;2229 5714 11354;11355 9161;9162 9162 2 9606 Homo sapiens 0.02519284011543732 EFGATECINPQDFSK Unmodified 1741.7618 0.76175015 3436 Q6IRT1;Q6FI45;P11766;H0YAG8 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 yes no 0 0 0 5 0 1 57.082 57.141 3 1.2373E-07 16725 20230619_1885_Aki_TMTPro18x_K_F5 126.71 112.01 94214 77019 77541 102410 76790 120690 93400 91959 173110 119550 114060 151400 155580 151310 121880 190250 169700 232200 86989 70718 80343 101490 80762 119890 95590 96705 169360 120520 121820 152240 156100 158110 127570 192660 162330 219870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86016000 6034 3436 5715 11356 9163 9163 1 9606 Homo sapiens -0.0794602564685647 EFGDQAEAAQDATLTTTTFQNEDEK Unmodified 2759.2046 0.20459222 4409 Q9BPX3;Q6NUR1 NCAPG Condensin complex subunit 3 yes no 0 0 0 1.75 0.829 2 1 1 57.827 57.842 3 2.2192000000000002E-45 17733 20230619_1881_Aki_TMTPro18x_K_F2 240.87 221.15 33356 23614 28464 28274 22318 26151 29307 23859 27124 34532 34137 30280 35998 29575 27525 32523 32702 37056 30780 21672 29228 28151 23870 26558 29083 24840 28067 34191 34743 30910 36268 30707 28453 32874 31269 35132 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58547000 6035 4409 5716 11357;11358;11359;11360 9164;9165;9166 9165 3 9606 Homo sapiens -0.10464188812375141 EFGFSGLNVK Unmodified 1096.5553 0.55530983 3873 Q14008-2;Q14008;Q14008-3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 1 0 1 58.901 58.901 2 0.00018281 18053 20230619_1880_Aki_TMTPro18x_K_F1 159.79 110.43 94338 73729 78542 101850 60639 82818 79148 91800 110700 122090 105500 135990 150010 134980 91559 207630 171980 213390 87087 67738 80981 100260 65126 85345 79756 93980 110910 122180 110560 137450 149070 143090 99230 207390 164060 202470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39865000 6036 3873 5717 11361 9167 9167 1 9606 Homo sapiens 0.010894390976545765 EFGNLTR Unmodified 835.41882 0.41881635 2688 B7Z4A1;O14949 UQCRQ Cytochrome b-c1 complex subunit 8 yes no 0 0 0 5.5 0.5 1 1 42.271 42.36 2 0.016876 10500 20230619_1886_Aki_TMTPro18x_K_F6 109.36 58.391 148350 106000 132630 153410 160150 208830 192390 169550 252660 145270 180090 196620 191450 176360 179890 191080 212430 229770 136950 97474 136660 151640 165410 205900 193790 175350 250660 149960 188800 196630 194650 183330 184990 193920 203050 217760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 389120000 6037 2688 5718 11362;11363 9168 9168 1 9606 Homo sapiens -0.00547630342202865 EFGNPNRPVASTR Unmodified 1443.7219 0.72187466 4670 Q9UJK0 TSR3 Ribosome biogenesis protein TSR3 homolog yes yes 0 0 1 7.5 0.5 1 1 33.992 34.031 3 0.0013267 7046 20230619_1888_Aki_TMTPro18x_K_F8 67.648 40.533 19717 11785 20878 25496 21149 27204 24013 24110 34263 25331 22391 26002 28373 20152 20243 27624 31566 25443 18210 10910 21150 24609 22068 27273 24353 24883 33836 25575 23807 26158 28374 21390 21389 27495 30050 24212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38575000 6038 4670 5719 11364;11365 9169 9169 1 9606 Homo sapiens 0.017762602554057594 EFGPVVIDYGK Unmodified 1222.6234 0.6233894 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9;Q9NRC3 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 6 0.816 1 1 1 59.655 59.709 3 0.00032456 18004 20230619_1886_Aki_TMTPro18x_K_F6 100.55 81.283 219580 182400 214820 218050 208300 238540 239050 238830 265250 298030 267410 281220 303330 247790 258830 331290 281520 326120 203020 167290 218550 217610 217780 239680 240100 245510 269100 297440 275910 285090 306270 261190 265650 331050 269450 309640 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 229650000 6039 3881 5720 11366;11367;11368 9170;9171;9172 9170 3 9606 Homo sapiens 0.020982639576459405 EFGTNIK Unmodified 807.41267 0.41266834 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;Q58FF3;Q58FF2 HSP90B1;HEL-S-125m;TRA1;HSP90B2P;GRP94c Endoplasmin;Putative endoplasmin-like protein yes no 0 0 0 6 0.816 1 1 1 45.855 45.938 2 0.018415 12056 20230619_1886_Aki_TMTPro18x_K_F6 113.5 38.31 1141400 849080 887020 1002300 1321300 1325700 1275900 1290200 1614300 1296500 1450900 1614000 1200700 1564300 899400 2372800 846310 1622800 1052900 778960 929410 1003900 1336900 1315500 1299000 1320300 1617700 1320500 1485800 1624400 1222800 1653800 925770 2325000 815630 1546500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2112099999.9999998 6040 3452 5721 11369;11370;11371 9173;9174;9175 9174 3 9606 Homo sapiens 0.001258514262758581 EFGVSPDK Unmodified 877.41815 0.41814765 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32;H0Y426 VARS Valine--tRNA ligase yes no 0 0 0 3.5 0.5 2 2 45.902 45.961 2;3 0.008192 12275 20230619_1882_Aki_TMTPro18x_K_F3 112.84 56.831 260860 199110 223270 237660 249140 276980 266610 272100 332800 335870 370520 365350 379660 321340 323590 417750 419160 374950 240820 182670 230420 237400 257410 277010 269890 279960 336820 336930 378670 368220 384600 337930 335820 415590 399820 356750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 639030000 6041 725 5722 11372;11373;11374;11375 9176;9177 9176 2 9606 Homo sapiens -0.0254646978190749 EFGVTTGR Unmodified 865.42938 0.42938104 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 0 0 4.5 0.5 1 1 39.746 39.812 2 0.014291 9421 20230619_1885_Aki_TMTPro18x_K_F5 94.114 47.048 94117 57165 76182 96376 98231 124160 111740 96907 147610 108510 113510 133820 133880 105260 111870 135060 136600 127320 86750 52708 79372 94354 100880 122710 112870 101250 146880 109920 119070 133700 134930 111100 115630 134750 130390 121050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145810000 6042 351 5723 11376;11377 9178 9178 1 9606 Homo sapiens -0.00871647687768018 EFHGLGDCIIK Unmodified 1287.6282 0.6281572 1072 A0A0S2Z3H3;P12235;A8K787;V9GYG0;A0A0S2Z3C4;Q59EP7 SLC25A4 ADP/ATP translocase 1 yes no 0 0 0 6.5 0.5 1 1 51.059 51.136 3 4.5E-05 14397 20230619_1886_Aki_TMTPro18x_K_F6 116.54 74.538 397770 419170 432140 469050 343550 407290 428990 438220 494350 492670 371430 354520 520600 395000 360930 546450 478170 449620 368730 383890 435040 468960 366320 417360 429740 447040 495470 490850 393160 367760 518870 414360 377300 540710 456170 428180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 641800000 6043 1072 5724 11378;11379 9179 9179 1 9606 Homo sapiens -0.004151751712470286 EFHGNIIK Unmodified 956.50797 0.50796571 4307 Q92804-2;Q92804;B4E312;A0A0J9YYE0 TAF15 TATA-binding protein-associated factor 2N yes no 0 0 0 7.5 0.5 1 1 42.075 42.114 3 0.0036446 10333 20230619_1888_Aki_TMTPro18x_K_F8 95.358 56.054 94239 57090 83022 96138 108610 103530 108690 109380 128820 92680 107780 90247 92210 84882 93546 108270 112140 95414 86913 52639 85721 93916 110710 104240 110170 110880 129120 94550 110780 91674 94746 88925 96204 107670 107000 90822 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 918850000 6044 4307 5725 11380;11381 9180 9180 1 9606 Homo sapiens 0.02797204617331772 EFHLNESGDPSSK Unmodified 1445.6423 0.64228694 1789 A0A8J8YYJ1;Q01105-3;A0A8I5KS71;B2RCX0;A0A024R895;Q5VXV3;A0A0C4DFV9;Q01105-4;Q01105-2;Q01105;P0DME0 SET;SETSIP Protein SET;Protein SETSIP yes no 0 0 0 4 1.41 1 1 1 1 1 42.556 42.629 3 6.5466E-16 10718 20230619_1882_Aki_TMTPro18x_K_F3 178.23 156.46 1468100 512090 1164700 1440400 1551700 1493000 1549600 1588100 1705500 1767700 1793800 1766300 1809500 1490800 1367800 1954100 1848100 1940000 1350300 478250 1215600 1376900 1580200 1506600 1567300 1620400 1733000 1776400 1836200 1784300 1825300 1571600 1428400 1953600 1764300 1842400 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3456299999.9999995 6045 1789 5726 11382;11383;11384;11385;11386 9181;9182;9183;9184;9185 9182 5 9606 Homo sapiens -0.06270851209228567 EFHVLPYR Unmodified 1059.5502 0.55016488 4055 Q5SWX8;Q5SWX8-4;Q5SWX8-2 ODR4 Protein odr-4 homolog yes no 0 0 0 8 0 1 45.249 45.277 3 0.00014795 11588 20230619_1888_Aki_TMTPro18x_K_F8 147.52 118.43 38863 21156 37444 39863 44644 47843 57742 50482 59643 57736 56829 63223 57475 51076 54306 60327 58515 73439 35849 19550 38293 38798 46129 47803 57479 51592 60541 58123 58518 63490 58507 53587 55549 61187 56050 69559 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69525000 6046 4055 5727 11387 9186 9186 1 9606 Homo sapiens 0.022771800257032737 EFIANHPDYK Unmodified 1232.5826 0.58258722 1371 B4E2I4;E1CEI4;Q14TF0;A0A2R8YEL6;P48506;A0A2R8Y648 GCLC Glutamate--cysteine ligase catalytic subunit yes no 0 0 0 4.5 0.5 1 1 43.578 43.641 3 0.0011398 11051 20230619_1885_Aki_TMTPro18x_K_F5 80.245 61.465 56397 43044 51065 51627 51252 54274 54120 51076 73886 69629 74069 67541 79163 71677 66532 87558 89373 91114 52086 39491 52317 51479 53328 54627 55014 52905 74155 69351 76147 68857 80089 74636 69254 87864 85303 86496 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97662000 6047 1371 5728 11388;11389 9187 9187 1 9606 Homo sapiens -0.02440077361961812 EFIEAEMK Unmodified 995.46338 0.46338328 87 Q2TB59;A0A024R0C3;Q13423;A0A590UJM2;A0A590UK29;E9PCX7;A0A590UK15;A0A590UJI3 NNT NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 2.5 0.5 1 1 53.501 53.541 3 0.0058667 15712 20230619_1882_Aki_TMTPro18x_K_F3 90.657 53.465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6048 87 5729 11390;11391 9188;9189 9189 2 9606 Homo sapiens -0.034529873110159315 EFIEGVSQFSVK Unmodified 1368.6925 0.6925316 4201 Q86YQ0;F6U1T9;D3YTA9;H7BYZ3;P63098 HZGJ;PPP3R1 Calcineurin subunit B type 1 yes no 0 0 0 7.5 0.5 1 1 61.135 61.171 3 1.2031E-05 18268 20230619_1888_Aki_TMTPro18x_K_F8 133.05 106.93 626200 611390 661570 698810 592570 603810 753610 702510 720360 862520 772420 653020 734270 643710 821010 818980 709600 728350 580000 560180 668290 697630 624480 620440 749590 715280 738550 856390 787930 672430 754680 673600 827210 815190 680140 692680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 618370000 6049 4201 5730 11392;11393 9190;9191 9191 2 9606 Homo sapiens 0.022933031865704834 EFIQEPAK Unmodified 960.49165 0.49164694 3222 O14744;O14744-2;B2RDD7;O14744-5;O14744-3;O14744-4;G3V580;G3V5L5;G3V2L6;C9JSX3 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed;Protein arginine N-methyltransferase 5 yes no 0 0 0 4 0 1 47.307 47.349 3 0.00072511 12768 20230619_1883_Aki_TMTPro18x_K_F4 104.44 76.695 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6050 3222 5731 11394 9192 9192 1 9606 Homo sapiens 0.009820786605587273 EFLAHSAK Unmodified 901.46577 0.46576654 4368 Q96J01;D6RGZ2;Q96J01-2 THOC3 THO complex subunit 3 yes no 0 0 0 7 0 1 40.12 40.186 3 0.0012271 9266 20230619_1887_Aki_TMTPro18x_K_F7 116.73 76.728 285460 223580 251060 242570 286850 352700 296800 285210 443630 183180 197400 151640 186630 145200 248610 202360 219410 147530 263620 204920 258440 244920 296040 346680 302960 293260 432920 190270 213450 155510 193790 153020 249820 199540 209720 140970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 314990000 6051 4368 5732 11395 9193 9193 1 9606 Homo sapiens 0.01109229208952911 EFLEDYDDDRDDPK Unmodified 1770.7221 0.7220534 3611 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 1.5 0.5 1 1 50.503 50.528 3 4.34E-05 14696 20230619_1881_Aki_TMTPro18x_K_F2 107.73 98.48 123400 103550 119430 134850 123670 146940 139010 133210 144800 145750 146540 144590 152520 132310 143570 160710 154430 160940 114100 95048 121830 133730 128610 147310 139450 137400 147290 146600 150530 146460 155070 138390 146840 161010 147690 152830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 389990000 6052 3611 5733 11396;11397 9194 9194 1 9606 Homo sapiens -0.132478741165869 EFLGTYNK Unmodified 970.476 0.47599688 378 A0A024R648;Q9Y5J7;A0A1W2PRH9;A0A1W2PQS5;G3V502;G3V2F3 TIMM9 Mitochondrial import inner membrane translocase subunit Tim9 yes no 0 0 0 7.5 0.5 1 1 50.522 50.601 2 0.0055228 13855 20230619_1887_Aki_TMTPro18x_K_F7 113.26 76.861 138110 116790 125330 145850 167510 166430 155240 160690 205750 156170 182480 148370 157410 127280 165620 187450 169500 158430 127640 107150 129110 145150 170290 166640 158760 164410 205640 157930 187000 150490 161810 135160 168610 185720 162060 150830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 282780000 6053 378 5734 11398;11399 9195 9195 1 9606 Homo sapiens -0.010422078564715775 EFLHAQEEVK Unmodified 1228.6088 0.60880197 2016 A8K2M0;P43686 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 4 0 1 44.15 44.194 3 0.00047956 11365 20230619_1883_Aki_TMTPro18x_K_F4 103.21 93.526 161180 128300 149670 164810 170500 190230 172310 177870 224620 201090 208100 211330 226000 187800 189880 248150 248660 228160 148920 117770 153410 163750 175630 190130 175260 183160 225200 202370 215050 213360 228420 197670 197280 247100 237210 216990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146420000 6054 2016 5735 11400 9196 9196 1 9606 Homo sapiens 0.003641918095127039 EFLHNQGK Unmodified 971.48248 0.48247924 4514 Q9H4A4;A6NKB8;Q7RU04 RNPEP Aminopeptidase B yes no 0 0 0 6.67 0.471 1 2 38.368 38.437 3 0.0001857 8833 20230619_1886_Aki_TMTPro18x_K_F6 146.81 113.97 217030 168380 204450 205230 243390 217900 233210 230470 299060 250060 295940 284750 284490 260630 254950 262330 329080 285020 200520 154500 209250 204460 249180 219830 237760 235120 300630 252840 303160 286710 289510 269660 263870 264890 313840 270630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 424420000 6055 4514 5736 11401;11402;11403 9197;9198 9197 2 9606 Homo sapiens -0.004402699050956471 EFLPILQEEPLPPLALVPFTEEEQR Unmodified 2933.5426 0.54262647 288 Q6Y7W6;Q6Y7W6-5;Q6Y7W6-4;A0A024R4A5;Q6Y7W6-3;I1E4Y6;E7ESB6;B4DRT8;C9JHW1;B4DLU7;C9JHT0;C9J0V6;C9JXQ0;F8WCD5;C9JPV7;C9JRZ2 GIGYF2;TNRC15 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 0 0 0 5 0 1 67.684 67.727 3 0.043529 21268 20230619_1885_Aki_TMTPro18x_K_F5 41.76 38.616 0 0 0 1396 725.53 0 0 1071.6 0 647.94 1027.3 1250.2 0 0 1171.8 0 0 996.66 0 0 0 1272 670.48 0 0 1008.5 0 690.9 963.67 1197 0 0 1100.3 0 0 932.42 0 0 0 1 1 0 0 1 0 1 1 1 0 0 1 0 0 1 8532100 6056 288 5737 11404 9199 9199 1 9606 Homo sapiens 0.15319685912572822 EFLQINSLGK Unmodified 1147.6237 0.62372375 852 Q6ICJ4;A0A087WY67;Q6IB75;G9J6Q6;G9J6Q5;G9J6Q4;B2R533;P0CG30;P0CG29 Em:AP000351.3;GSTT2;GSTT2B Glutathione S-transferase theta-2B;Glutathione S-transferase theta-2 yes no 0 0 0 3.67 3.09 1 1 1 59.2 59.218 3 0.00040572 18158 20230619_1880_Aki_TMTPro18x_K_F1 107.24 85.198 231020 215730 227830 253020 269970 319210 292020 289440 318580 322180 314900 321940 329520 288400 325730 359960 333300 382220 213790 197740 232550 253320 277830 317050 293950 298560 323040 323860 324010 325730 335730 302410 331920 361710 319160 362620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158840000 6057 852 5738 11405;11406;11407 9200;9201 9200 2 9606 Homo sapiens 0.055816836775193224 EFLQTESPESTELQSR Unmodified 1879.88 0.87995103 4288 Q8WXH0-2;Q8WXH0;D4YW74;G3V5X4;A0A0C4DGK3;Q8WXH0-7;Q7Z362;Q8WXH0-13;Q8WXH0-3;Q6MZP0;Q8WXH0-5;Q8WXH0-10;Q8WXH0-4;Q8WXH0-12;Q8WXH0-11;Q8WXH0-6 SYNE2;TROPH;DKFZp686J1895;DKFZp686M09200 Nesprin-2 yes no 0 0 0 2 0 1 50.629 50.681 3 0.00024088 14776 20230619_1881_Aki_TMTPro18x_K_F2 88.319 77.264 52720 42530 45356 53384 51104 60381 59301 59254 71166 55634 59755 57092 59905 43500 52735 56952 57675 58731 48688 39029 46833 53103 52910 60485 59664 60514 71319 56483 61827 57448 60749 46069 54047 57102 55142 55760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29549000 6058 4288 5739 11408 9202 9202 1 9606 Homo sapiens -0.024793748573301855 EFLVAGGEDFK Unmodified 1210.587 0.58700389 4727 Q9Y3F4;Q9Y3F4-2;B0AZV0;H0YH33 STRAP Serine-threonine kinase receptor-associated protein yes no 0 0 0 4.67 0.471 1 2 58.757 58.795 2;3 1.2092E-06 17839 20230619_1883_Aki_TMTPro18x_K_F4 136.96 118.18 365610 314520 337630 395430 329150 386320 356410 371050 561080 462930 413180 401630 458780 341970 378860 477450 458370 426700 337970 288570 345530 392510 343950 390960 364050 382570 553990 461330 432640 408510 462820 362100 391580 474480 437580 405940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 445800000 6059 4727 5740 11409;11410;11411 9203;9204 9203 2 9606 Homo sapiens -0.009866129390502465 EFLVQLK Unmodified 875.51165 0.5116541 2992 F8W8C1;Q6ZTA4;Q6ZTA4-2 TRIM67 Tripartite motif-containing protein 67 yes no 0 0 0 4.5 3.5 1 1 58.998 59.018 2 0.011157 18081 20230619_1880_Aki_TMTPro18x_K_F1 121.52 26.633 177340 147760 153240 151780 135980 164170 179720 183740 222410 198550 199940 191470 207400 175130 200810 215670 225660 223130 163810 135330 157430 153250 144010 165550 179990 186700 223190 199690 206480 194210 211160 183380 205770 216450 215650 211860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 348460000 6060 2992 5741 11412;11413 9205;9206 9205 2 9606 Homo sapiens 0.06891874391180863 EFMPPGLQELIPFVK Unmodified 1743.927 0.92696498 3609 Q53HA4;Q5T5C7;P49591 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 0 2 0 1 66.459 66.466 3 1.3139E-07 21385 20230619_1881_Aki_TMTPro18x_K_F2 125.53 110.84 12636 9264.1 8980.8 11073 7983.2 9002 8295.7 9406 16549 11610 13141 16653 19983 23529 10753 29046 26432 41421 11648 8500.6 9422 11007 8409.2 9271.9 8602.6 9645.4 16245 11794 13952 16936 19807 24327 12069 29723 25242 39156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20921000 6061 3609 5742 11414 9207 9207 1 9606 Homo sapiens 0.0847585795077066 EFMQHAR Unmodified 917.41777 0.41777049 812 A0A0G2JMS5;A0A087WU62;A0A087X2D5;B4DEF8;Q9BRJ2 MRPL45 39S ribosomal protein L45, mitochondrial yes no 0 0 0 5.5 0.5 1 1 32.02 32.077 3 0.0056045 6444 20230619_1885_Aki_TMTPro18x_K_F5 105.39 82.371 28939 20263 20910 23033 28403 31525 27609 22022 37302 27536 31184 28115 26334 23734 22370 30401 36457 27279 26674 18588 22035 23139 28928 31022 28156 23316 37172 27587 32039 28381 26872 24968 23635 30246 34682 25977 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34520000 6062 812 5743 11415;11416 9208 9208 1 9606 Homo sapiens -0.04424167982745075 EFMQHAR Oxidation (M) 933.41269 0.41268512 812 A0A0G2JMS5;A0A087WU62;A0A087X2D5;B4DEF8;Q9BRJ2 MRPL45 39S ribosomal protein L45, mitochondrial yes no 0 1 0 5 0 2 27.09 27.161 3 0.014566 4753 20230619_1885_Aki_TMTPro18x_K_F5 79.454 67.228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6063 812 5743 11417;11418 9209;9210 9210 480 2 9606 Homo sapiens -0.05668471845353906 EFMWALK Unmodified 923.45751 0.45751004 3673 P58546;Q69YG1;C9JL85 MTPN;DKFZp761E1322 Myotrophin yes no 0 0 0 1.5 0.5 1 1 62.322 62.327 2 0.018143 19654 20230619_1881_Aki_TMTPro18x_K_F2 107.66 25.986 378500 332650 345480 385050 335460 421000 427670 446300 568040 511270 451770 442810 480870 422550 417570 526950 499180 552900 349900 304930 353900 385120 352410 423500 430110 455760 566080 511280 470120 451990 487090 442150 430860 528960 477190 524670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 373370000 6064 3673 5744 11419;11420 9211;9212 9212 2 9606 Homo sapiens -0.007280410320390729 EFMWALK Oxidation (M) 939.45242 0.45242467 3673 P58546;Q69YG1;C9JL85 MTPN;DKFZp761E1322 Myotrophin yes no 0 1 0 8 0 1 59.122 59.164 2 0.013492 17425 20230619_1888_Aki_TMTPro18x_K_F8 108.24 63.627 197940 165250 175010 191690 215570 209580 228820 217470 256430 223270 238610 202040 215720 185930 220890 250610 217930 229880 182880 151510 180380 191700 220900 210860 230720 221780 258860 224750 244440 205750 221160 195730 224540 249560 208630 218520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139200000 6065 3673 5744 11421 9213 9213 2371 1 9606 Homo sapiens -0.01972344894647904 EFNAEVHR Unmodified 1000.4726 0.47264284 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9 RPL5 60S ribosomal protein L5 yes no 0 0 0 3.33 1.25 1 1 1 33.551 33.612 3 1.9833E-07 7093 20230619_1881_Aki_TMTPro18x_K_F2 186.16 141.81 450330 286330 368640 448030 474450 497270 472150 459470 684480 528790 576830 604220 589410 493530 467730 605830 614660 571220 415210 263690 383320 439480 484770 498110 482500 473950 680520 533380 597390 606190 595510 518580 486620 604690 586380 543070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2063299999.9999998 6066 1916 5745 11422;11423;11424 9214;9215;9216;9217 9214 4 9606 Homo sapiens -0.027574579104793884 EFNAEVHRK Unmodified 1128.5676 0.56760585 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9 RPL5 60S ribosomal protein L5 yes no 0 0 1 6 0.816 1 1 1 33.605 33.674 4 0.00032478 7048 20230619_1885_Aki_TMTPro18x_K_F5 121.73 95.219 765400 559940 715080 703100 1039400 803420 871040 893620 1033800 808000 936860 760770 900470 693950 778330 876630 1019600 743220 706890 514050 734950 699880 1047100 807760 892970 904120 1039600 820050 962840 773190 914170 727870 807340 870340 971290 708340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2061799999.9999998 6067 1916 5746 11425;11426;11427 9218;9219 9218 2 9606 Homo sapiens 0.008464755607064944 EFNAFVLDK Unmodified 1081.5444 0.5444108 3924 Q15269 PWP2 Periodic tryptophan protein 2 homolog yes yes 0 0 0 6.5 0.5 1 1 60.743 60.793 2 0.00624 18463 20230619_1886_Aki_TMTPro18x_K_F6 100.88 55.248 89416 78080 86546 94259 89342 93852 97038 96809 98255 105930 102810 88683 93603 74995 110590 106550 90646 97358 82693 71604 88238 93870 92734 95028 97459 98939 100260 106010 104820 90407 96573 79507 111050 106060 86969 92544 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78567000 6068 3924 5747 11428;11429 9220 9220 1 9606 Homo sapiens 0.006900367233583893 EFNCHHVVR Unmodified 1196.5509 0.55090993 2739 P08069;C9J5X1 IGF1R Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain;Tyrosine-protein kinase receptor yes no 0 0 0 5.5 0.5 1 1 28.284 28.336 3 0.0002183 5231 20230619_1886_Aki_TMTPro18x_K_F6 113.22 88.002 12128 9176.5 13710 13778 17431 14547 11546 12514 18793 11386 13535 12632 14187 10674 11216 11791 14485 11776 11221 8440.1 13841 13540 17628 14613 12212 12897 18508 11623 14150 12706 14313 11139 11639 11831 13809 11195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7142100 6069 2739 5748 11430;11431 9221 9221 1 9606 Homo sapiens -0.039503485968907626 EFNEDGALAVLQQFK Unmodified 1707.8468 0.84680041 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;A0A7I2V346;A0A7I2V5Q6;A0A7I2YQV8;F6UXX1;A0A7I2V4J0;B2R8Z8;O60506;O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 7.5 0.5 1 1 64.312 64.338 3 0.083387 19737 20230619_1887_Aki_TMTPro18x_K_F7 37.034 24.157 19312 15651 18281 17368 17069 21851 18087 19390 23319 18014 17834 16896 23664 19063 23358 23431 19789 23534 17849 14346 18635 17465 17888 21695 18345 19935 23234 18263 18811 17296 23943 19832 23562 23481 18994 22338 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6931699999.999999 6070 1680;2265 5749 11432;11433 9222 9222 1 9606 Homo sapiens 0.02119087881260384 EFNEEGALSVLQQFK Unmodified 1737.8574 0.85736509 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-3;A0A6Q8PH35 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 6.8 0.748 2 2 1 64.06 64.094 2;3 8.815900000000001E-25 19688 20230619_1887_Aki_TMTPro18x_K_F7 276.41 233.67 269800 215120 253730 280170 245500 308270 282480 258250 308200 313620 329920 313550 332990 299620 315780 342350 318630 379500 249320 197500 259170 277880 256980 308340 283490 268880 313430 314070 337530 317920 339010 311800 321750 345350 305260 359830 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1943599999.9999998 6071 3254 5750 11434;11435;11436;11437;11438 9223;9224;9225 9225 3 9606 Homo sapiens 0.017950705356952312 EFNKYDTDGSK Unmodified 1302.5728 0.57281039 622 P61158;A0A024RAI1;Q59FV6;B4DXW1;B4DT29;B4DTI0 ACTR3 Actin-related protein 3 yes no 0 0 1 5 0 1 43.088 43.169 3 0.0003875 10847 20230619_1885_Aki_TMTPro18x_K_F5 103.88 91.048 137310 121590 143560 154220 249440 198510 182570 177680 179310 184990 211980 112540 128070 77704 195020 66501 85862 37773 127080 111560 146870 153610 248250 197090 187860 183080 184210 184320 211710 116470 136150 80877 190390 65870 82875 36358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94338000 6072 622 5751 11439 9226 9226 1 9606 Homo sapiens -0.06637310158021137 EFNLNELYQR Unmodified 1324.6412 0.64116473 2245 B7Z4Y0;B2R7I0;Q9Y320-2;Q9Y320 TMX2 Thioredoxin-related transmembrane protein 2 yes no 0 0 0 6 0 1 57.575 57.644 2 0.0008204 17136 20230619_1886_Aki_TMTPro18x_K_F6 123.96 105.8 31993 25981 29771 38610 34810 39722 40538 38215 46685 43278 44891 41633 43217 35934 37663 49871 44374 46477 29564 23886 30564 37940 35930 40031 40716 39291 47130 43425 46041 42173 43898 37994 38836 49663 42406 44172 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78018000 6073 2245 5752 11440 9227 9227 1 9606 Homo sapiens -0.008170207874627522 EFPDQHH Unmodified 908.37768 0.37767982 3343 O95139;A0A087WZX2;O95139-2 NDUFB6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 yes no 0 0 0 1.5 0.5 1 1 30.982 31.015 3 0.0061507 6385 20230619_1880_Aki_TMTPro18x_K_F1 94.539 89.173 66195 40141 70601 79822 105820 95957 94499 91099 122910 66464 96021 101740 88905 80898 90428 51719 115650 98569 61144 37103 71921 77479 106680 95672 96758 92773 122310 69671 99515 100910 91107 82617 93086 55203 110290 93187 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93822000 6074 3343 5753 11441;11442 9228 9228 1 9606 Homo sapiens -0.08017391381667949 EFPGLAGVK Unmodified 916.50182 0.5018177 4089 Q86UY0;Q6EHZ3;Q658S9;Q8NBS9;A0A024QZV0;Q8NBS9-2 TXNDC5;STRF8;DKFZp666I134;hCG_1811539 Thioredoxin domain-containing protein 5 yes no 0 0 0 7.5 0.5 1 1 55.309 55.372 3 0.0002201 15743 20230619_1888_Aki_TMTPro18x_K_F8 106.6 71.243 115020 100160 106930 109090 113680 117140 127390 130470 149130 107350 105670 90452 104180 86587 130610 117030 106720 111860 106340 91768 109410 109610 117890 118190 128300 131720 148840 109280 110360 92577 107620 91080 130960 116870 102380 106280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 627810000 6075 4089 5754 11443;11444 9229 9229 1 9606 Homo sapiens 0.04022686385803809 EFPNFDK Unmodified 895.40758 0.40758296 4516 Q9H4L7;Q9H4L7-2 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 0 0 0 5 0.816 1 1 1 52.859 52.907 2 0.0344 15064 20230619_1885_Aki_TMTPro18x_K_F5 99.755 41.178 121460 96994 103010 120980 94681 123660 102160 112030 146260 148430 138940 131570 156220 123160 102370 168500 152970 150250 112160 89008 106160 120210 99494 124530 103980 116210 146280 147580 143500 134110 156320 129750 108200 167370 145850 142910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59960000 6076 4516 5755 11445;11446;11447 9230;9231 9230 2 9606 Homo sapiens -0.04430452436338328 EFPTVPLVK Unmodified 1028.5906 0.59063271 1248 Q16851-2;A0A140VKE1;A0A7I2YQ74;Q16851;E7EUC7;B4DUP2;A0A087WYS1;Q53QE9;D6W5E6 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes no 0 0 0 1 0 1 59.318 59.318 3 0.0037121 18235 20230619_1880_Aki_TMTPro18x_K_F1 67.897 47.027 89206 82637 86364 91931 69772 93188 91421 81299 85490 101190 100730 88266 97519 81507 107060 94724 95001 92339 82532 75709 87773 92112 74467 93859 90765 84454 88094 100790 102450 89982 100050 85020 107960 94893 90995 87739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17788000 6077 1248 5756 11448 9232 9232 1 9606 Homo sapiens 0.07748101625475101 EFQATAR Unmodified 821.40317 0.40316629 1063 P11310-2;P11310;Q5HYG7;Q5T4U5;A0A0S2Z366;B4DWX6;B7Z9I1;F6YB23;A0A7P0T932;A0A7P0TB51;A0A7P0TA63;A0A7P0T8J9;A0A7P0TBD1;A0A7P0TAB2;A0A7P0TA39;E9PJM9;A0A7P0TB28;A0A7P0T9W7;E9PRX4 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 3 0.816 1 1 1 34.247 34.305 2 0.0073584 7208 20230619_1883_Aki_TMTPro18x_K_F4 125.81 87.008 142380 81650 179440 182310 278220 287780 200130 241590 234070 143130 209800 233230 182910 174910 214840 98954 239320 211090 131690 75641 180660 176990 278870 281740 207470 247220 235270 152800 215450 230520 189210 178350 218580 107350 228550 199410 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 152710000 6078 1063 5757 11449;11450;11451 9233;9234 9234 2 9606 Homo sapiens -0.01467916859246543 EFQDAGEQVVSSPADVAEK Unmodified 2004.9276 0.9276295 611 P31937;A0A024RA75 HIBADH 3-hydroxyisobutyrate dehydrogenase, mitochondrial;3-hydroxyisobutyrate dehydrogenase yes no 0 0 0 2 1 1 1 53.836 53.836 3 4.1398E-07 15936 20230619_1880_Aki_TMTPro18x_K_F1 99.86 87.027 15415 11526 12486 15714 18298 17217 19659 17119 18441 17204 17713 18616 19328 15205 17059 23471 21489 23714 14223 10590 13034 15538 18559 17298 19691 17506 18829 17425 18287 18731 19565 16239 17668 23443 20534 22513 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14502000 6079 611 5758 11452;11453 9235;9236 9235 2 9606 Homo sapiens -0.03463720657123304 EFQECVECFER Unmodified 1531.6072 0.60716376 4121 Q6P3X3;H7C3A3;B4DRC7 TTC27 Tetratricopeptide repeat protein 27 yes no 0 0 0 1.5 0.5 1 1 52.565 52.581 2 0.08224 15433 20230619_1880_Aki_TMTPro18x_K_F1 58.592 33.206 11882 9217.4 9124.8 12891 9188.3 14008 12497 11490 13617 16191 16047 14870 13853 13641 13453 15956 15904 15685 10963 8469.8 9528.9 12720 9665.2 14010 12441 12042 13913 16070 16246 15114 14203 14227 13836 15976 15192 14901 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47993000 6080 4121 5759 11454;11455 9237 9237 1 9606 Homo sapiens -0.137375533330669 EFQEHCR Unmodified 1004.4134 0.4134134 2858 D6W625;Q13111-3;Q13111 CHAF1A Chromatin assembly factor 1 subunit A yes no 0 0 0 2 0 1 27.166 27.242 3 0.0010845 4745 20230619_1881_Aki_TMTPro18x_K_F2 152.31 100.63 15412 5886.7 16675 15538 15250 20783 14108 16406 17877 13052 20910 18564 16552 12763 13348 6754.8 20641 12349 14214 5485.9 16807 14948 15958 20485 14427 16969 18087 13545 21095 18391 16873 13049 13990 7224.5 19621 11700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7512000 6081 2858 5760 11456 9238 9238 1 9606 Homo sapiens -0.08861677196307483 EFQLGESVK Unmodified 1035.5237 0.52367535 526 A0A024R8M0;Q14344;Q14344-2;B4DWV9 GNA13 Guanine nucleotide-binding protein subunit alpha-13 yes no 0 0 0 5 0 1 51.363 51.438 3 0.0016041 14368 20230619_1885_Aki_TMTPro18x_K_F5 96.015 59.681 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6082 526 5761 11457 9239 9239 1 9606 Homo sapiens 0.007334463437246086 EFQQNNWHAVGCGFR Unmodified 1848.8114 0.81143473 1191 A0A8Q3WK80;A0A8Q3WK74;Q9NZL9-4;Q9NZL9-2;Q9NZL9;A0A140VJP2;A8K7A4;A0A8Q3WK84;Q9NZL9-3;A0A8Q3WLC0;A0A8Q3SIE5;A0A8Q3WKR9;E5RJR3;A0A8Q3WLP1;Q9NZL9-5 MAT2B Methionine adenosyltransferase 2 subunit beta yes no 0 0 0 4.5 3.5 1 1 46.889 46.914 3 6.768900000000001E-64 12210 20230619_1888_Aki_TMTPro18x_K_F8 258.6 243.91 119210 98449 115740 114750 132650 153580 125610 119950 156340 145460 140000 127910 158560 134930 134690 168630 155510 161430 110210 90271 118120 115060 136370 151580 128000 125530 156930 145200 145120 130980 160130 140750 138720 168410 148630 153380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342230000 6083 1191 5762 11458;11459 9240;9241 9241 2 9606 Homo sapiens -0.07901853127555114 EFQQYLPVVMGPLMK Unmodified 1778.9099 0.90993471 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6 IPO5;RANBP5 Importin-5 yes no 0 0 0 4 0 1 64.919 64.929 3 0.00063853 20400 20230619_1883_Aki_TMTPro18x_K_F4 82.529 69.762 16617 13196 20819 19226 12829 15181 22659 17719 21781 17910 19299 14853 17865 15296 22957 17836 16495 17326 15395 12131 20675 18871 14208 15710 22244 17953 22116 18005 19840 15251 18514 15901 22870 17872 15850 16459 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39075000 6084 782 5763 11460 9242 9242 1 9606 Homo sapiens 0.051636140732853164 EFQSPDEEMK Oxidation (M) 1254.5074 0.50743294 3309 O75533;Q7Z497 SF3B1 Splicing factor 3B subunit 1 yes no 0 1 0 2 0 1 42.558 42.637 3 0.016582 11042 20230619_1881_Aki_TMTPro18x_K_F2 61.165 44.533 50943 42836 58801 54234 63879 74131 67684 69345 86592 71915 76593 88307 76290 72085 71819 80057 89120 98850 47174 39307 59138 54106 66085 73323 68607 71220 86704 73069 79119 88312 77734 75301 74111 81348 85169 93654 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29897000 6085 3309 5764 11461 9243 9243 1934 1 9606 Homo sapiens -0.10964047675361144 EFQSPDEEMKK Unmodified 1366.6075 0.60748134 3309 O75533;Q7Z497 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 1 4 0 1 44.898 44.942 3 0.00099291 11698 20230619_1883_Aki_TMTPro18x_K_F4 92.247 68.827 98239 72427 87473 92573 98477 110870 113320 100480 121950 116140 117270 128680 123060 107700 110480 128610 130080 121910 90700 66501 89966 92064 101850 110470 113610 103820 123560 116940 120870 129310 124860 112860 113740 128490 124220 115890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64028000 6086 3309 5765 11462 9244 9244 1 9606 Homo sapiens -0.0611581034156643 EFQSPLILDEDQAREPQLQES Unmodified 2471.1816 0.18161236 3968;2412 B3KTC8;B7ZKJ7;Q3KQV9;Q3KQV9-2 UAP1L1 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 no no 0 0 1 3 0 1 60.772 60.801 3 0.042169 18762 20230619_1882_Aki_TMTPro18x_K_F3 44.953 34.319 15751 13785 17003 16235 14301 16347 14942 17013 16431 15346 17515 18631 16777 15428 15322 16893 16362 16114 14580 12639 17121 16204 15088 16538 15092 17288 16694 15695 17894 18655 17083 16087 15672 16908 15643 15314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11971000 6087 2412;3968 5766 11463 9245 9245 1 9606 Homo sapiens 0.004868816515227081 EFQTVPFYIFSESYGGK Unmodified 1997.9411 0.94109472 4545 Q9HB40;Q9HB40-2;I3L506;I3L4Z3 SCPEP1 Retinoid-inducible serine carboxypeptidase yes no 0 0 0 3.67 3.09 1 1 1 64.71 64.72 3 3.0985E-09 20689 20230619_1881_Aki_TMTPro18x_K_F2 129.32 116.84 32725 24956 25388 32068 33829 34452 50210 38938 43493 36967 42811 41786 46141 30701 38564 44569 42850 44904 30191 22913 26585 31828 34871 34762 49410 39448 44624 37609 44098 41850 46568 32804 39618 44562 40971 42639 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 103720000 6088 4545 5767 11464;11465;11466 9246;9247 9246 2 9606 Homo sapiens -0.01795818087225598 EFRPEDQPWLLR Unmodified 1584.8049 0.80487601 3547 Q6IBK5;P35269;B4DXY2;M0QXD6;M0R0Z3;M0R0R9 GTF2F1 General transcription factor IIF subunit 1 yes no 0 0 1 7 0 1 54.586 54.65 3 1.16E-07 15595 20230619_1887_Aki_TMTPro18x_K_F7 141.73 112.94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6089 3547 5768 11467 9248 9248 1 9606 Homo sapiens 0.035865769834344974 EFSFEAWNAK Unmodified 1227.556 0.55603812 2144 X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9 GTF2I General transcription factor II-I yes no 0 0 0 6.5 0.5 1 1 60.815 60.865 3 2.4555E-06 18478 20230619_1886_Aki_TMTPro18x_K_F6 166.34 135.79 136110 107260 136990 139680 121200 166690 143990 140330 191220 165590 158160 173400 170860 160190 152110 178190 173690 195030 125830 98474 138900 138730 128090 165800 145320 145870 190770 166340 164470 175160 173220 166590 156350 179650 166130 184980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 239900000 6090 2144 5769 11468;11469 9249;9250 9249 2 9606 Homo sapiens -0.04863766253288304 EFSGGWRMR Unmodified 1124.5185 0.51854717 1135 B4DRU9;A0A0S2Z5L1;Q9NUQ8-2;Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes no 0 0 1 3 0 1 29.841 29.935 3 0.086051 5588 20230619_1882_Aki_TMTPro18x_K_F3 38.293 3.0687 16804 10517 13629 16240 19576 21880 20102 18748 19468 18008 20555 20987 20287 17441 21366 15678 23726 22609 15491 9684.9 14217 15990 19881 21615 20210 19351 19909 18332 21037 21040 20767 18024 21804 16191 22670 21405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5617200 6091 1135 5770 11470 9251 9251 1 9606 Homo sapiens -0.03873135999901933 EFSGNPIK Unmodified 890.44978 0.44978213 2041 Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637-2;P35637;Q70T18 FUS RNA-binding protein FUS yes no 0 0 0 7 0.816 1 1 1 46.158 46.228 2 0.0014728 12186 20230619_1886_Aki_TMTPro18x_K_F6 142.08 98.376 1366900 1055600 1083100 1247900 1516800 1446500 1491100 1443600 1782100 1425900 1575600 1477400 1671500 1328100 1431600 1764600 1730800 1437300 1261300 968260 1131200 1247100 1539700 1448300 1513200 1474500 1789900 1444300 1629600 1493700 1691300 1397800 1478200 1747100 1651100 1369700 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4046399999.9999995 6092 2041 5771 11471;11472;11473 9252;9253;9254;9255 9252 4 9606 Homo sapiens 0.00017522972052574914 EFSGYVESGLK Unmodified 1214.5819 0.58191851 2493 B4DT77;B4DWU2;B4DHY4;Q53HM8;P20073-2;P20073;B2R7L2;B2R657 ANXA7 Annexin;Annexin A7 yes no 0 0 0 5.5 0.5 1 1 54.439 54.512 3 0.0011149 15620 20230619_1885_Aki_TMTPro18x_K_F5 89.731 77.812 283450 231380 309280 314800 310170 309110 314190 311730 380120 374200 369500 378410 422480 336490 389150 424110 399290 467820 262290 212510 312010 310980 321960 313140 318690 320010 383250 374980 382010 382570 427760 353320 397070 427090 382420 443620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 340940000 6093 2493 5772 11474;11475 9256;9257 9256 2 9606 Homo sapiens -0.01678916801665764 EFSHIAFLTIK Unmodified 1304.7129 0.71287311 1666 A0A7I2V4K5;B4E324;X6R5C5;Q59EV6;X6R8A1;P10619-2;P10619 CTSA;PPGB Carboxypeptidase;Lysosomal protective protein;Lysosomal protective protein 32 kDa chain;Lysosomal protective protein 20 kDa chain yes no 0 0 0 2.5 0.5 1 1 60.129 60.15 3 0.00074357 18483 20230619_1882_Aki_TMTPro18x_K_F3 93.345 70.871 45218 39514 43644 50632 52642 66795 66159 61538 71756 54987 44516 46659 56434 43814 53378 51434 48002 49514 41818 36259 44672 50415 54394 66159 66041 63048 71679 55708 47509 47639 57049 45720 54024 51468 45990 47043 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27927000 6094 1666 5773 11476;11477 9258 9258 1 9606 Homo sapiens 0.07270518637028545 EFSITDVVPYPISLR Unmodified 1734.9192 0.91923707 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;O14992 HSPA4;HEL-S-5a;HS24/p52 Heat shock 70 kDa protein 4 yes no 0 0 0 1 0 1 64.348 64.348 3 1.2367E-10 20258 20230619_1880_Aki_TMTPro18x_K_F1 154.65 140.69 7749.3 7906.3 9239.7 12001 10183 7761.1 8555.3 12275 12809 9428.6 10729 13635 14320 11434 12357 14423 13840 14940 7188 7265.2 9286.5 11724 10435 8278.2 8862.9 12150 12720 9808 11281 13578 14406 12025 12693 14468 13235 14181 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36182000 6095 3544 5774 11478 9259 9259 1 9606 Homo sapiens 0.08117421954852944 EFSIYMTK Unmodified 1017.4841 0.48411873 415 B3KUZ8;A0A024R6W0;P00505;A8K482;P00505-2 GOT2 Aspartate aminotransferase;Aspartate aminotransferase, mitochondrial yes no 0 0 0 8 0 1 57.017 57.068 2 0.00043896 16603 20230619_1888_Aki_TMTPro18x_K_F8 163.99 119.54 85114 66084 88795 103640 79949 118200 95864 104220 285160 115770 96134 109640 127530 113390 113860 120600 129060 133360 78705 60808 89891 101680 84812 117970 101390 107720 271710 116670 108910 111650 128660 117240 116890 121780 123370 126520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97400000 6096 415 5775 11479 9260 9260 1 9606 Homo sapiens -0.023923969313500493 EFSLAGGIWHGR Unmodified 1328.6626 0.66256887 4285 Q8WWM7;A0A024QZB7;A0A0C4DGL7;H3BRB0 ATXN2L Ataxin-2-like protein yes no 0 0 0 2 0 1 52.85 52.883 3 1.0687E-05 15695 20230619_1881_Aki_TMTPro18x_K_F2 118.87 100.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6097 4285 5776 11480 9261 9261 1 9606 Homo sapiens 0.011384090318870221 EFSMMFK Unmodified 918.39795 0.39794625 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 1 0 1 60.365 60.365 3 0.024244 18636 20230619_1880_Aki_TMTPro18x_K_F1 66.993 34.862 36929 29948 30574 34216 29696 38703 35603 37616 42053 40169 39344 36951 45530 35827 37779 38108 39973 40797 34096 27457 31604 34269 31145 38761 35761 38561 42374 40368 40744 37621 45882 37139 38674 38413 38230 38718 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12958000 6098 1022;3868 5777 11481 9262 9262 1 9606 Homo sapiens -0.06451680037707774 EFSPFGSITSAK Unmodified 1269.6241 0.62411768 1667 Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;H0Y5F5;H0YEU6;Q59GZ7;Q53GL4;Q3B867;Q147Y3 PABPC4 Polyadenylate-binding protein 4;Polyadenylate-binding protein no no 0 0 0 3.67 3.09 1 1 1 59.109 59.128 3 2.1781E-07 18121 20230619_1880_Aki_TMTPro18x_K_F1 161.93 139.01 356040 292880 342550 379560 341980 384180 394440 409130 449990 431690 428570 430290 499220 399850 414610 488860 501220 479260 329130 268840 349330 376240 356790 388660 396450 416820 454520 435030 443780 435960 503160 418300 428260 489090 478570 455380 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 455400000 6099 1667 5778 11482;11483;11484 9263;9264;9265 9263 3 9606 Homo sapiens 9.05860672446579E-05 EFSPFGTITSAK Unmodified 1283.6398 0.63976774 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQE4;A0A024R9E2;H0YAP2;H0YB86 PABPC1 Polyadenylate-binding protein 1;Polyadenylate-binding protein yes no 0 0 0 3.67 3.09 1 1 1 59.33 59.348 3 1.2422E-06 17507 20230619_1888_Aki_TMTPro18x_K_F8 145.01 113.37 239590 186330 203290 230190 210790 221620 233680 240380 270730 280390 261530 215590 306490 241750 247450 320970 273820 241310 221190 170990 209790 228770 219010 225240 235470 245300 273520 279270 270380 222970 308460 252730 254520 316620 261510 230160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1844399999.9999998 6100 566 5779 11485;11486;11487 9266;9267 9267 2 9606 Homo sapiens 0.009293451237681438 EFSQSFDAAMK Unmodified 1259.5492 0.54923818 2291 Q5LJB0;B2RB07;Q9Y5K5-2;Q9Y5K5-4;Q9Y5K5-3;Q9Y5K5;Q5LJA5;Q5LJA9;H0Y6Y4 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes no 0 0 0 5.5 0.5 1 1 54.406 54.473 3 3.4556E-05 15607 20230619_1885_Aki_TMTPro18x_K_F5 135.99 120.78 91585 69899 74255 92603 78376 88858 89937 81944 103480 93358 92763 88494 99585 77889 91037 98087 114620 116320 84518 64195 77049 91564 81470 89970 90403 84548 104220 93623 95952 89718 101000 81840 94059 99231 109450 110280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134630000 6101 2291 5780 11488;11489 9268;9269 9268 2 9606 Homo sapiens -0.07015447196181412 EFSSEAR Unmodified 824.36645 0.36644643 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3;Q5CAQ4;I3L0K7;I3L239;I3L2D5 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 1.5 0.5 1 1 33.084 33.113 2 0.00053096 7212 20230619_1880_Aki_TMTPro18x_K_F1 183.89 154.05 130240 62415 170140 173560 225690 208380 156160 204970 174760 129470 230040 265050 165920 180420 235400 70409 247010 242380 120430 58137 170280 166380 227760 207850 162310 207550 178910 138970 230970 259730 174910 183070 237850 82708 236200 228410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 156430000 6102 1211 5781 11490;11491 9270;9271 9270 2 9606 Homo sapiens -0.0527621347580407 EFSTNNPFK Unmodified 1082.5033 0.50327426 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3;Q05CG6;F5H6N4 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 0 7.5 0.5 1 1 51.839 51.915 3 0.00061225 14333 20230619_1888_Aki_TMTPro18x_K_F8 108.98 90.202 343760 287430 325280 345930 320090 388470 339860 368890 406180 322240 296760 266670 319780 258210 344150 344480 332320 286390 317770 263630 332040 345130 333840 389060 343670 376860 405560 326650 310550 273200 326750 271230 348860 341560 317760 272800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184860000 6103 1005 5782 11492;11493 9272;9273 9273 2 9606 Homo sapiens -0.03467724316078602 EFSYLDEEEK Unmodified 1287.5507 0.55067797 4403 Q99543-2;Q99543;H7C3L7;C9IZ83 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes no 0 0 0 1.5 0.5 1 1 53.25 53.267 2 4.8079E-05 15878 20230619_1881_Aki_TMTPro18x_K_F2 163.64 107.08 51333 44206 42814 54720 46161 58296 53232 56462 65042 72652 57926 71123 74851 60220 56598 87759 73456 80458 47416 40551 44334 54428 47969 58620 53626 58230 65398 72494 60582 71873 74990 63942 58979 87237 70167 76471 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94760000 6104 4403 5783 11494;11495 9274;9275 9275 2 9606 Homo sapiens -0.08159534626406639 EFTAQNLGK Unmodified 1006.5084 0.50835964 2400 Q5BKY2;Q6IB98;Q53HR0;Q53HG0;B3KS98;O15372 EIF3H;EIF3S3 Eukaryotic translation initiation factor 3 subunit H yes no 0 0 0 7 0.816 1 1 1 47.786 47.861 3 0.00040876 12562 20230619_1887_Aki_TMTPro18x_K_F7 115.71 72.202 262790 204000 243460 250290 290900 298090 295680 292060 355920 320630 338150 323270 370590 304930 287430 394230 399400 358940 242770 187190 249670 249630 298470 297730 299680 299500 358450 322690 349000 327660 373300 319870 300490 392440 380780 341450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 269690000 6105 2400 5784 11496;11497;11498 9276;9277 9277 2 9606 Homo sapiens 0.00536579546530902 EFTEAVEAK Unmodified 1022.492 0.49204087 2035 Q6FHP5;A8K401;P35232;Q6PUJ7;Q53FV0;C9JZ20;C9JW96;E7ESE2;E9PCW0;A8K9G2 PHB;HEL-S-54e Prohibitin yes no 0 0 0 2.5 0.5 1 1 48.608 48.68 2 7.4419E-06 13544 20230619_1882_Aki_TMTPro18x_K_F3 178.94 116.23 362410 302190 311500 370160 464340 482260 466920 461910 635820 443810 486810 461660 483080 401900 433800 500970 483090 450040 334760 277210 323360 369640 470440 478740 475490 472690 631620 450470 506060 466090 490860 421720 445070 498830 461510 428110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 592050000 6106 2035 5785 11499;11500 9278;9279 9279 2 9606 Homo sapiens -0.01830546410246825 EFTEREQGEVR Unmodified 1378.6477 0.64770667 3423 V9HW74;P09936;D6RE83;B2RD14;A6NLJ7 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 0 1 1.5 0.5 1 1 33.44 33.469 3 4.9948E-17 7328 20230619_1880_Aki_TMTPro18x_K_F1 225.15 179.27 210660 294980 227340 189920 353040 175060 205610 242150 175830 178280 210590 155940 169690 132180 211460 213620 215690 136940 195780 268920 230870 200870 350970 180710 215210 240910 182410 182740 212390 158910 176390 141380 214510 209090 205780 131170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 554540000 6107 3423 5786 11501;11502 9280;9281 9280 2 9606 Homo sapiens -0.02647127626778456 EFTRPEEIIFLR Unmodified 1548.83 0.83002813 2766 CON__ENSEMBL:ENSBTAP00000016046;P23142;Q8NBH6 FBLN1 Fibulin-1 yes no 0 0 1 7 0 1 57.756 57.808 3 0.021701 16922 20230619_1887_Aki_TMTPro18x_K_F7 62.685 30.187 + 45908 38800 44419 44980 52642 65017 53292 55708 78493 53889 53549 65972 59373 55532 65656 63963 62194 75467 42448 35572 45385 45183 54152 63993 54452 57485 77481 54988 56472 66040 60756 58060 66457 64790 59632 71509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10958000 6108 2766 5787 11503 9282 9282 1 9606 Homo sapiens 0.07756631785991885 EFVCFLLQEDPAK Unmodified 1594.7701 0.77012999 1384 A0A2X0SFJ0;O75962-4;O75962;O75962-2;O75962-3 TRIO Triple functional domain protein yes no 0 0 0 6 0 1 64.148 64.194 3 0.031167 20011 20230619_1886_Aki_TMTPro18x_K_F6 49.929 37.783 21067 14439 15826 24905 21064 24837 24153 22881 31450 23519 24766 28811 26622 28370 29254 29009 28061 35485 19420 13310 16652 24257 21584 25055 24379 23542 31336 23920 25843 28986 27279 29294 29636 29506 26912 33608 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48835000 6109 1384 5788 11504 9283 9283 1 9606 Homo sapiens -0.003464269395408337 EFVISDR Unmodified 864.43413 0.43413207 1447 Q14019;A0A384MTY2;H3BT58 COTL1 Coactosin-like protein yes no 0 0 0 3 0.816 1 1 1 45.413 45.48 2 0.0041568 12071 20230619_1882_Aki_TMTPro18x_K_F3 150.17 105.55 1222200 897430 1207700 1242100 1724400 1976600 1739800 1743500 2502500 1852200 2052300 2071000 2122000 1821400 1865300 1907000 2230900 2181800 1129300 824730 1236400 1235300 1752600 1936900 1775700 1799200 2486200 1874500 2129500 2083800 2151900 1891900 1921600 1930500 2130700 2069600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1092500000 6110 1447 5789 11505;11506;11507 9284;9285 9285 2 9606 Homo sapiens -0.0035076354499778972 EFVISDRK Unmodified 992.5291 0.52909508 1447 Q14019;A0A384MTY2;H3BT58 COTL1 Coactosin-like protein yes no 0 0 1 7 0.816 1 1 1 43.466 43.527 3 0.0014759 10683 20230619_1887_Aki_TMTPro18x_K_F7 105.52 74.231 385630 372420 369480 325010 688910 511750 599350 650190 650930 622450 618720 523470 631330 490240 559660 682290 633700 484970 356860 340490 381020 335220 685890 507370 610890 653170 659230 627380 636210 535400 640290 516940 575080 671230 604570 463270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 942430000 6111 1447 5790 11508;11509;11510 9286 9286 1 9606 Homo sapiens 0.03253169926188093 EFVMQEAQQNDDVSK Unmodified 1766.7781 0.77812849 4110 Q6IN85;G3V5A2;Q6IN85-4;H0YJN6 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes no 0 0 0 2 0 1 51.417 51.462 3 0.0018709 15082 20230619_1881_Aki_TMTPro18x_K_F2 79.771 73.334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6112 4110 5791 11511 9287 9287 1 9606 Homo sapiens -0.07458944480754326 EFVMQVK Unmodified 879.45242 0.45242467 478;2084 Q9NUL3;Q4LE57;Q9NUL3-2;Q9NUL3-4;Q9NUL3-7;Q9NUL3-3;Q9NUL3-6;Q9NUL3-8;A0A024R7X7;Q2TBD5;E7EVJ4;E7EPX0;A8K276;E5RJN7;B7Z1P6;E7EVI1;A8K622;Q59F99;O95793-2;O95793-3;O95793;Q5JW30;B3KRE0 STAU2;STAU2 variant protein;STAU1 Double-stranded RNA-binding protein Staufen homolog 2;Double-stranded RNA-binding protein Staufen homolog 1 no no 0 0 0 8 0 1 52.387 52.465 2 0.024608 14620 20230619_1888_Aki_TMTPro18x_K_F8 104.45 68.252 234840 220160 223010 222340 253710 273040 235370 249530 293910 182380 177630 146420 166100 137820 210260 193970 184570 151680 217260 201530 227950 225160 260680 271830 240200 254680 291180 187050 187110 150220 172010 145400 211510 191720 176610 144640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45375000 6113 478;2084 5792 11512 9288;9289 9289 2 9606 Homo sapiens 0.007876551053641379 EFVPGVK Unmodified 774.42759 0.42759012 2841 D6R9Y1;Q6FID7;Q49AE6;Q9BPZ3 PAIP2 Polyadenylate-binding protein-interacting protein 2 yes no 0 0 0 7 0.816 1 1 1 49.736 49.814 2 0.030812 13477 20230619_1887_Aki_TMTPro18x_K_F7 94.887 20.145 530690 423300 470180 494640 522690 601820 560960 522840 749140 671760 597340 443740 742000 511040 389750 845500 630000 511580 490170 388200 483650 495110 540460 598660 568950 543450 746650 664470 624730 464190 735440 542870 418290 824190 599640 489870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 226280000 6114 2841 5793 11513;11514;11515 9290 9290 1 9606 Homo sapiens 0.03135343294297854 EFVSASFDK Unmodified 1028.4815 0.48147619 801 A0A087WT20;Q9NV06;A0A087X1F8 DCAF13 DDB1- and CUL4-associated factor 13 yes no 0 0 0 6 0 1 53.077 53.155 3 0.049377 15202 20230619_1886_Aki_TMTPro18x_K_F6 38.754 22.036 19133 15622 18974 19239 18872 19183 19031 20021 19645 17810 20572 18131 22538 18215 21547 22208 22434 23276 17690 14332 19283 19136 19600 19427 19211 20337 20013 18130 21137 18418 22886 19006 21981 22311 21462 22093 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11167000 6115 801 5794 11516 9291 9291 1 9606 Homo sapiens -0.03162529064661612 EFVTAFK Unmodified 840.43815 0.43815481 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 5.33 3.09 1 1 1 55.292 55.323 2 0.0044055 15908 20230619_1887_Aki_TMTPro18x_K_F7 117.16 51.897 595190 423460 527880 607930 607720 798620 752650 700880 868720 829660 870790 921210 953280 819280 813870 1007500 923850 1024500 549400 389370 543830 600910 630060 790270 753720 726220 878450 834590 897210 927650 963820 858360 837240 1009800 883570 972540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1368200000 6116 909 5795 11517;11518;11519 9292;9293;9294 9293 3 9606 Homo sapiens 0.011553259487186551 EFWEQKPLLIQR Unmodified 1585.8617 0.86166261 1610 A0A6M8YHF9;A0A6M8YDW2;A0A6M8YDW1;Q8IUF8-4;Q8IUF8;Q8IUF8-2;D6RCB6 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA yes no 0 0 1 2 0 1 57.689 57.704 3 2.4324E-05 17690 20230619_1881_Aki_TMTPro18x_K_F2 126.5 111.53 97141 97361 119310 89961 103540 107220 149950 137050 106070 94319 87278 39557 40320 23108 154270 23591 24472 19146 90119 89040 118970 91876 109760 107870 147130 136760 109710 95869 88306 42159 47835 24507 146980 23880 24632 18251 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151930000 6117 1610 5796 11520 9295 9295 1 9606 Homo sapiens 0.09216624539931217 EFWPQEVWSR Unmodified 1362.6357 0.63568542 3562 Q6IAX1;P37268-5;P37268;E9PNM1;B4DND3;A0A1W2PQ47;B7Z9R8;P37268-3;P37268-2;P37268-4;B4DTK0;B4DWP0 FDFT1 Squalene synthase yes no 0 0 0 6.5 0.5 1 1 61.727 61.774 2 0.00038208 18573 20230619_1887_Aki_TMTPro18x_K_F7 128.52 108.38 208580 165750 173770 185900 140230 189310 178540 178700 271410 194130 158570 141590 190380 149160 142970 235530 195220 197470 192560 151950 179010 186180 149880 190900 180620 183700 266580 194000 169200 146570 191080 158250 149620 232850 186300 187960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202990000 6118 3562 5797 11521;11522 9296 9296 1 9606 Homo sapiens -0.031126995792874368 EFYILWTK Unmodified 1098.575 0.57498264 4021 Q59EF6;B4E1R7;B2RCM3;P17655;B4DN77;P17655-2;B3KUH9;Q6ZVC6 CAPN2 Calpain-2 catalytic subunit yes no 0 0 0 2 0 1 63.575 63.584 2 0.056499 20217 20230619_1881_Aki_TMTPro18x_K_F2 67.993 43.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6119 4021 5798 11523 9297 9297 1 9606 Homo sapiens 0.029638151084100173 EFYSEILDK Unmodified 1142.5496 0.54955575 1913 A2IDC7;Q4TT37;A2IDC6;Q13084 MRPL28 39S ribosomal protein L28, mitochondrial yes no 0 0 0 4 0.816 1 1 1 60.756 60.783 3 0.00082099 18230 20230619_1885_Aki_TMTPro18x_K_F5 102.07 46.641 39534 31613 37387 41627 36129 40870 42211 42767 59542 47538 51552 48732 55061 44832 42638 60863 54666 60096 36534 29027 38167 41203 37833 41423 42739 43691 59316 47853 53381 49326 55495 47232 44344 60801 52226 57068 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40337000 6120 1913 5799 11524;11525;11526 9298;9299 9299 2 9606 Homo sapiens -0.016017042046769348 EGAAHAFAQYNLDQFTPVK Unmodified 2106.0171 0.017053633 1928 Q53GE2;Q53GC7;A4D0V4;P47755;C9JUG7;F8W9N7;P47755-2 CAPZA2 F-actin-capping protein subunit alpha-2 yes no 0 0 0 7.5 0.5 1 1 57.752 57.804 3 2.4804E-10 16927 20230619_1888_Aki_TMTPro18x_K_F8 130.56 118.94 69280 57298 70349 79752 47773 64923 67134 66670 80844 90729 86831 93275 99359 86253 79109 111330 99628 119610 64074 52635 71102 78480 52037 66779 67030 68671 81877 90471 89379 94339 100080 90541 82118 111830 95263 113440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 224880000 6121 1928 5800 11527;11528 9300 9300 1 9606 Homo sapiens 0.008285788128887361 EGAAHAFAQYNMDQFTPVK Unmodified 2123.9735 0.97347426 3638 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 0 0 0 7.5 0.5 1 1 55.657 55.719 3 3.2053E-10 15995 20230619_1888_Aki_TMTPro18x_K_F8 126.14 117.32 136680 98046 114550 125520 93852 123540 123220 130810 144310 168730 154610 172920 200380 160270 152820 209010 179280 189920 126120 90036 117980 124490 100150 125190 123250 134130 146400 168570 160230 174910 200740 168340 158010 208020 171350 180550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 431110000 6122 3638 5801 11529;11530 9301;9302 9302 2 9606 Homo sapiens -0.04355353955907049 EGAEEIDR Unmodified 917.40904 0.40903953 4075 Q5VTL8;A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B yes no 0 0 0 1 0 1 32.81 32.81 2 0.0011009 7111 20230619_1880_Aki_TMTPro18x_K_F1 148.99 41.979 19652 8303.9 17962 22220 22194 35071 19388 24955 35188 18804 27301 44518 29646 31566 26066 17054 42225 46330 18104 7734.9 18487 21418 22766 34193 20204 26022 34575 20151 28593 43501 30078 32217 27406 19040 40273 43679 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17066000 6123 4075 5802 11531 9303 9303 1 9606 Homo sapiens -0.05296863138232766 EGAEEIDRHVER Unmodified 1438.6801 0.68006943 4075 Q5VTL8;A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B yes no 0 0 1 1 0 1 31.643 31.643 3 9.7444E-06 6638 20230619_1880_Aki_TMTPro18x_K_F1 138.42 110.21 14510 14257 13225 13402 15287 14648 12013 12311 19766 15413 17244 17009 15329 17192 12438 22899 21900 20988 13424 13041 13566 13632 15630 14683 12545 12824 19584 15477 17717 17218 15611 18006 13279 22780 20856 19958 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16571000 6124 4075 5803 11532 9304 9304 1 9606 Homo sapiens -0.021723402237512346 EGAFSNFPISEETIK Unmodified 1667.8043 0.80426689 1748;2610 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9;B4DW97;Q9BQ39;B4DED6;K0J110;Q53FI9 DDX21;DDX50;mcdrh Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 no no 0 0 0 5 0.707 1 2 1 61.02 61.06 2;3 5.8673E-14 18562 20230619_1886_Aki_TMTPro18x_K_F6 174.59 162.9 392660 349030 409930 441350 329400 405950 413480 420140 480550 553180 488730 450480 556640 439730 452420 582620 491530 526630 363410 320210 414010 437690 351120 413450 414290 431790 486590 548710 503680 461770 560770 461710 464780 579660 470160 500660 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2480800000 6125 1748;2610 5804 11533;11534;11535;11536 9305;9306;9307 9307 3 9606 Homo sapiens -0.002923072469457111 EGALCEENMR Oxidation (M) 1223.4911 0.49107137 3447 P13639;Q8TA90;B4DPU3 EEF2 Elongation factor 2 yes no 0 1 0 1.4 0.49 3 2 34.491 34.514 2;3 0.023012 7860 20230619_1880_Aki_TMTPro18x_K_F1 55.806 48.925 406370 305650 379340 355260 422740 426240 401410 413320 550110 472650 512460 488540 540820 435270 425270 544720 575030 474280 375360 280360 388020 355800 435120 425510 410620 424610 550350 475190 528440 493650 545570 456520 443360 541390 548040 451590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1408500000 6126 3447 5805 11537;11538;11539;11540;11541 9308;9309;9310 9309 2086 3 9606 Homo sapiens -0.11173452113098392 EGALCEENMR Unmodified 1207.4962 0.49615675 3447 P13639;Q8TA90;B4DPU3 EEF2 Elongation factor 2 yes no 0 0 0 2 0.816 1 1 1 38.511 38.549 2 2.3016E-09 9118 20230619_1881_Aki_TMTPro18x_K_F2 199.46 182.07 492740 401360 420600 411060 442790 498160 454960 462890 630900 602180 583460 577340 654210 521530 486140 711130 542720 614290 455060 367620 433510 415760 459090 496530 463480 478900 631040 600540 603650 585530 657250 549890 501710 705480 519220 584220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1340200000 6127 3447 5805 11542;11543;11544 9311;9312 9312 2 9606 Homo sapiens -0.09929148250489561 EGALDLSGLR Unmodified 1029.5455 0.54547343 1445 Q6IB91;A0A384MTT2;Q16822;A0A0S2Z430;H0YML5;Q16822-3;A0A0S2Z4C0 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 4 0 1 51.785 51.812 2 1.5366E-05 14820 20230619_1883_Aki_TMTPro18x_K_F4 162.88 110.75 150120 122610 142010 117570 110930 120420 147600 145060 184260 171220 187530 231780 195040 167960 241450 183530 212440 274830 138750 112240 144320 119380 118720 122210 147870 147210 185700 173440 193000 230180 201010 176280 242800 189450 203970 259830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 302090000 6128 1445 5806 11545 9313 9313 1 9606 Homo sapiens 0.03188251092274186 EGALTAFR Unmodified 863.45012 0.45011648 3908 Q15008;Q15008-4;B3KT66;Q15008-3;Q15008-2;C9J0E9 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 7 0 1 45.708 45.796 2 0.00096987 11640 20230619_1887_Aki_TMTPro18x_K_F7 122.74 51.027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6129 3908 5807 11546 9314 9314 1 9606 Homo sapiens 0.012929426918958598 EGATEEAVR Unmodified 960.45124 0.45123869 4447 Q9BV20;Q9BV20-2 MRI1 Methylthioribose-1-phosphate isomerase yes no 0 0 0 1 0 1 30.919 30.919 2 0.002951 6372 20230619_1880_Aki_TMTPro18x_K_F1 101.64 60.614 11622 5444.9 14173 13990 15034 20594 13305 18934 18120 12423 18967 22111 16779 20527 18120 7738.4 25092 23727 10738 5063.9 14201 13496 15536 20252 13684 19266 18192 13209 19348 21926 17307 20541 18726 8914.5 23931 22372 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8896100 6130 4447 5808 11547 9315 9315 1 9606 Homo sapiens -0.030568877298605912 EGATVYATGTHAQVEDGR Unmodified 1860.8602 0.86021864 540 P32322-3;P32322;A0A024R8U9;E7D7X9;P32322-2;A0A1B2JLU7;E7D7Y0;E2QRB3;Q2TU78;J3QKT4;J3KQ22;B7Z8T1;J3QL24;J3QL32;J3QL23;J3QLK9;J3QR88 PYCR1;PIG45 Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase yes no 0 0 0 3 0.816 1 1 1 36.533 36.586 3 1.2604E-85 8283 20230619_1881_Aki_TMTPro18x_K_F2 357.37 343.95 138910 109420 129450 125940 97247 99115 121550 117630 115520 156960 200600 220720 184020 171330 192950 195740 221340 239780 128340 100340 131750 125570 104130 102760 121100 120030 121470 158320 201260 219450 188850 179600 197640 198770 211630 227210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1039699999.9999999 6131 540 5809 11548;11549;11550 9316;9317;9318 9316 3 9606 Homo sapiens -0.035777060774307756 EGCDPVNR Unmodified 945.39743 0.39742898 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 1 0 1 30.274 30.274 2 0.0022296 6081 20230619_1880_Aki_TMTPro18x_K_F1 130.04 92.945 16870 10047 22334 20174 27042 28222 24626 30840 27251 15701 27006 33103 24958 23155 27266 12140 30140 26996 15614 9289.1 22290 19639 27624 27965 25071 30902 27549 17210 27680 32446 25660 23629 27756 13264 28789 25495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12507000 6132 3598 5810 11551 9319 9319 1 9606 Homo sapiens -0.07745383433211828 EGCLQSELIQFHLK Unmodified 1700.8556 0.85559095 2924 E9PJP2;Q5TF21;A0A994J4H7 SOGA3 Protein SOGA3 yes no 0 0 0 7.5 0.5 1 1 59.72 59.761 3 4.0842E-05 17706 20230619_1888_Aki_TMTPro18x_K_F8 103.83 80.353 34429 29122 28068 34703 20672 29162 29845 25946 33280 33430 29691 32924 36081 29573 34646 37496 42229 42972 31793 26706 28977 34509 22372 29829 29664 26961 33580 33376 30942 33322 36559 31053 35688 37846 40336 40755 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48896000 6133 2924 5811 11552;11553 9320 9320 1 9606 Homo sapiens 0.033197382460912195 EGCTEVSLLR Unmodified 1162.5652 0.56522259 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 3.5 0.5 1 1 45.892 45.952 2 9.1721E-06 12289 20230619_1882_Aki_TMTPro18x_K_F3 166.09 118.51 478440 374910 425410 458070 465500 531940 583140 552840 652990 583570 592980 585890 629530 533200 582210 653980 659250 667740 441870 344000 437490 456810 483770 532710 583070 564130 658710 588330 612820 593060 639180 558200 597510 655810 630080 634050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 682560000 6134 3957 5812 11554;11555 9321;9322 9321 2 9606 Homo sapiens -0.00955740959261675 EGCTVSPETISLNVK Unmodified 1632.8029 0.80288668 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YD53;A0A2R8YGE5;A0A2R8Y4Q3;A0A2R8YE54;A0A2R8Y4G4 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 6 0 1 54.584 54.661 3 8.7606E-11 15852 20230619_1886_Aki_TMTPro18x_K_F6 159.12 136.27 92323 81328 88874 104790 88752 96326 108500 106780 122480 120010 125200 114190 139830 115680 128150 134530 131970 135800 85383 74630 90671 103780 92723 98290 108690 108740 124100 120410 128900 116300 141660 120300 130760 134940 126260 128960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 965620000 6135 2865 5813 11556 9323 9323 1 9606 Homo sapiens 0.011797353926340293 EGDAHPLGALPVGTLINNVESEPGR Unmodified 2541.2823 0.28232946 1593 A0A669KAX9;Q5T653;C9IY40;A0A024RD44 MRPL2 39S ribosomal protein L2, mitochondrial yes no 0 0 0 5 0 1 60.097 60.149 3 7.7065E-09 17957 20230619_1885_Aki_TMTPro18x_K_F5 107.9 89.606 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6136 1593 5814 11557 9324 9324 1 9606 Homo sapiens 0.07333958425033416 EGDFNNLTAAAFHK Unmodified 1533.7212 0.72120596 3924 Q15269 PWP2 Periodic tryptophan protein 2 homolog yes yes 0 0 0 6.5 0.5 1 1 53.884 53.956 3 1.3747E-08 15301 20230619_1887_Aki_TMTPro18x_K_F7 148.66 119.36 78826 57060 70904 76290 69691 83001 77792 85078 85956 98261 83789 94108 104250 85097 93684 108580 96212 102320 72775 52420 72705 75547 72773 83441 78254 87092 87137 98439 87047 95391 105220 89334 95673 108350 92073 97226 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 438960000 6137 3924 5815 11558;11559 9325 9325 1 9606 Homo sapiens -0.024305791843062252 EGDLIAAQAR Unmodified 1042.5407 0.5407224 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80;A0A6Q8PGH0 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 2.5 0.5 1 1 41.643 41.712 2 1.7464E-05 10319 20230619_1882_Aki_TMTPro18x_K_F3 161.79 128.05 1083500 864660 944210 1227300 1762100 1868000 1747000 1758700 2337400 1462800 1717300 1739900 1690000 1427500 1587400 1761400 1887100 1818400 1000600 794570 985160 1217100 1765700 1837200 1778700 1795600 2320100 1504400 1790000 1744000 1721400 1500400 1633400 1767400 1802200 1726800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1665499999.9999998 6138 1428 5816 11560;11561 9326;9327 9327 2 9606 Homo sapiens 0.021153669495106442 EGDLLFTVAK Unmodified 1091.5863 0.58627561 1678 Q13347;A0A7I2YQF8;Q5U0F4;Q53HU7;A0A7I2V613;A0A7I2V607;A0A7I2V3N2;A0A7I2V2M3;A0A7I2V640;A0A7I2YQI2;A0A7I2V3U3;A0A7I2V5V8;A0A7I2YQU2;A0A7P0MRT9;A0A7I2V685;A0A7I2YQI6;Q5TFK1;A0A7I2V4S8;A0A7I2V3K6;A0A7I2YQP9;A0A7I2V4C2;A0A7I2V391;A0A7I2YQN1;A0A7I2V5E4;A0A7I2V3T4;A0A7I2YQX4 EIF3I Eukaryotic translation initiation factor 3 subunit I yes no 0 0 0 5.5 0.5 2 2 60.549 60.603 2;3 2.0652E-06 18357 20230619_1886_Aki_TMTPro18x_K_F6 169.77 92.716 342570 264560 282340 323810 267600 338780 305860 302420 370350 420650 375480 379730 439860 375090 319930 483580 431310 438240 316200 242760 291880 322290 280750 340540 308230 314650 374260 417560 387710 387250 441300 392790 334500 481180 411640 416700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 427300000 6139 1678 5817 11562;11563;11564;11565 9328;9329 9329 2 9606 Homo sapiens 0.04414592411899321 EGDQTSNNIPADIVFVLK Unmodified 1958.9949 0.99492121 3503 Q6FI51;Q6FHS4;P25685;A0A7I2V3K7;P25685-2;M0QXK0;M0R080 DNAJB1 DnaJ homolog subfamily B member 1 yes no 0 0 0 6 0 1 64.076 64.122 3 7.2022E-14 19982 20230619_1886_Aki_TMTPro18x_K_F6 157.42 145.25 58359 54297 64537 68545 61257 77528 66809 66123 72411 76111 82688 83158 83277 73712 78594 93030 90203 99639 54056 49806 65031 68158 64097 77428 67245 68619 73879 76602 84389 83808 84779 77365 80727 93497 86259 94533 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132990000 6140 3503 5818 11566 9330 9330 1 9606 Homo sapiens 0.053783543444524184 EGDREAIVAALLTR Unmodified 1512.826 0.82600539 2338 B7Z6D5;B3GQE6;Q96GQ7;Q53G15 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 0 1 7 0 1 55.909 55.967 3 1.4654E-08 16177 20230619_1887_Aki_TMTPro18x_K_F7 153.22 124.93 55157 53189 57025 57191 60411 63201 61076 63040 73243 66779 60278 60929 69750 57273 64048 71690 67125 69625 51074 48708 57818 57539 62481 63481 61929 64499 73435 67126 62880 62003 70610 59978 65441 71673 64213 66142 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357270000 6141 2338 5819 11567 9331 9331 1 9606 Homo sapiens 0.09010542292276114 EGDRGVITDR Unmodified 1116.5523 0.55234972 4613 Q9NWH9;H7C3F4;A0A024R5U7;A0A024R5X3;Q9NWH9-3 SLTM SAFB-like transcription modulator yes no 0 0 1 2 0 1 30.04 30.108 3 0.00059285 5762 20230619_1881_Aki_TMTPro18x_K_F2 108.9 74.518 20056 22421 22453 14733 26179 16461 21816 22976 20035 21171 25404 22604 22750 17503 18299 20073 30497 18908 18606 20454 22600 15592 26666 16729 22214 22961 20733 21518 25672 22718 23089 18364 19363 20063 28981 18014 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7709000 6142 4613 5820 11568 9332 9332 1 9606 Homo sapiens -0.001264360271534315 EGDRVEIR Unmodified 972.49886 0.49885759 245 B2R642;A8K6A6;A0A024R3I5;P43121;B3KXZ9;P43121-2 MCAM Cell surface glycoprotein MUC18 yes no 0 0 1 1.5 0.5 1 1 30.522 30.555 3 0.0069695 6197 20230619_1880_Aki_TMTPro18x_K_F1 90.629 33.526 159650 111630 151650 178020 172730 154510 189950 194390 228380 181790 213460 201240 222130 194400 193150 187440 251900 209180 147430 102780 155170 173950 177970 158950 191700 195530 229710 185060 219990 203230 225160 200390 200100 189750 240150 198610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 210910000 6143 245 5821 11569;11570 9333;9334 9333 2 9606 Homo sapiens 0.011508112610044918 EGDTGGTMEITEAALVR Unmodified 1748.8251 0.82507869 2625 B4DYP7;Q96CW5-2;Q96CW5;A0A3B3ITE3;A0A087WU06;Q96CW5-3 TUBGCP3 Gamma-tubulin complex component 3 yes no 0 0 0 2 0 1 55.036 55.057 2 0.0013276 16648 20230619_1881_Aki_TMTPro18x_K_F2 73.848 49.504 9482.2 8415.2 11977 11150 7607.8 10218 9861.1 10045 12900 13647 13081 14811 14692 10657 13594 16260 15822 18343 8791.7 7724.2 11890 11025 8321.1 10395 9915.3 10373 12983 13631 13495 14839 14881 11438 13981 16355 15134 17391 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16813000 6144 2625 5822 11571 9335 9335 1 9606 Homo sapiens -0.019380849295885128 EGDTIIVPGVEGPIVTQIR Unmodified 1992.0892 0.089155943 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 0 5 0 1 62.316 62.363 3 0.00012329 18984 20230619_1885_Aki_TMTPro18x_K_F5 77.39 64.623 106420 74624 88932 75184 84268 85759 71521 87697 88577 67852 101770 56826 67819 74618 86613 77557 98878 79617 98181 68382 91600 76115 87585 86018 73497 88867 89657 69356 102020 59024 71312 76483 88365 78043 94354 75669 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202560000 6145 817 5823 11572 9336 9336 1 9606 Homo sapiens 0.13279493166601242 EGDTVIFASDDEQDR Unmodified 1695.7224 0.72238775 2947 Q9ULU8-4;F1T0E5;Q9ULU8-2;Q9ULU8-3;Q9ULU8;A2RRN7;H7BYR4;F8W8P5;B3KX29;X5D7B2;X5DQT2;X5DNG0;H0YFP0;B7ZM57;X5D8X0;X5D2D9;Q86UW7-2;Q86UW7;Q86UW7-3;X5D8W6 CADPS;CADPS2 Calcium-dependent secretion activator 1;Calcium-dependent secretion activator 2 yes no 0 0 0 1 0 1 48.894 48.894 2 0.00037354 13906 20230619_1880_Aki_TMTPro18x_K_F1 122.46 107.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6146 2947 5824 11573 9337 9337 1 9606 Homo sapiens -0.09764454396713518 EGDVEEPTDDSLPTTGDAGGREPMEEK Unmodified 2860.2193 0.21925601 4678 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 1 1 0 1 47.436 47.436 4 1.6903E-14 13325 20230619_1880_Aki_TMTPro18x_K_F1 144.26 135.78 29728 22717 26877 37380 22704 34579 36125 32438 33871 38581 37895 44683 39174 39980 33823 49929 45109 49260 27456 20918 27560 36469 24340 35085 35568 33479 34809 38840 38795 44917 39745 41884 35203 49927 43080 46779 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 50092000 6147 4678 5825 11574 9338;9339 9338 2 9606 Homo sapiens -0.1364448472645563 EGDVLTLLESER Unmodified 1359.6882 0.6881745 2212 B2R4R9;P62857 RPS28 40S ribosomal protein S28 yes no 0 0 0 2 0.816 1 1 1 62 62.013 2 4.8857E-31 19491 20230619_1881_Aki_TMTPro18x_K_F2 270.36 233.98 1868200 1458700 1659700 1836800 1366700 1779300 1772400 1719400 2025500 2157100 1952600 1953600 2222400 1762400 1812000 2390000 2055800 2178600 1725400 1338800 1700300 1823000 1456500 1801600 1771700 1772800 2047600 2150200 2018300 1986300 2239500 1858000 1866500 2378000 1965500 2071100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7198299999.999999 6148 2212 5826 11575;11576;11577 9340;9341;9342 9341 3 9606 Homo sapiens 0.022717939729773207 EGDVLTPEQAR Unmodified 1213.5939 0.59388018 620 Q9UKD2;A0A024RAE1 MRTO4;C1orf33 mRNA turnover protein 4 homolog yes no 0 0 0 1.5 0.5 1 1 40.459 40.459 2 5.0183E-11 10032 20230619_1881_Aki_TMTPro18x_K_F2 180.09 159.11 203230 164040 181470 184790 193310 216110 213540 202020 240240 247630 249240 225880 283820 223820 182300 297200 291440 243810 187740 150380 186360 185390 200490 215880 214950 208570 243710 247200 256510 230420 283730 234850 193800 294160 277460 232310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 318620000 6149 620 5827 11578;11579 9343;9344 9344 2 9606 Homo sapiens -0.004373000584791953 EGDYVLFHHEGGVDVGDVDAK Unmodified 2257.0287 0.028740531 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 2.5 1.12 1 1 1 1 51.315 51.351 4 3.9969E-16 14592 20230619_1883_Aki_TMTPro18x_K_F4 151.23 132.73 126310 106610 141550 125670 115100 127310 124350 132830 140340 157860 158420 149790 168290 142200 164640 187100 172370 173940 116930 97754 142010 125450 121870 128770 125470 135960 142900 157910 162090 152260 171260 149310 168030 186500 164860 165340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2502300000 6150 161 5828 11580;11581;11582;11583 9345 9345 1 9606 Homo sapiens -0.049492689544877067 EGEAGGDAGQGGGFEALGAPLDVR Unmodified 2229.0298 0.029803164 3333 O94819 KBTBD11 Kelch repeat and BTB domain-containing protein 11 yes yes 0 0 0 2 0 1 58.169 58.184 3 0.0079302 17935 20230619_1881_Aki_TMTPro18x_K_F2 54.521 48.358 27640 21143 26478 27052 24864 31202 29386 30540 39441 30928 32812 29129 31015 30295 29034 34497 29305 36847 25539 19410 26979 26891 26124 31208 29678 31248 39314 31206 33870 29716 31645 31425 29608 34715 28089 34945 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9365200 6151 3333 5829 11584 9346 9346 1 9606 Homo sapiens -0.03555054585513062 EGEDAVIVCDVVSSLPPTIIWK Unmodified 2426.2403 0.24031321 806;3082 P13591-1;A0A087WTF6;P13591;P13591-3;P13591-4;A0A087WV75;A0A087WWD4;A0A087WX77;A0A087WTE4;P13591-5;P13591-6;O00557;H7BYX6 NCAM1 Neural cell adhesion molecule 1 no no 0 0 0 6.5 0.5 1 1 66.708 66.741 3 3.9917E-05 20808 20230619_1887_Aki_TMTPro18x_K_F7 83.063 70.4 4931.1 4591 5931.2 7694.9 3741.7 6526.1 5516.2 6577 6565.5 6327.3 8012.7 7312.5 7655.2 6443.7 7290.9 7668.9 6530.6 9261.6 4571.2 4225.3 5922.4 7493.5 4124.8 6678.3 5498.5 6710.4 6681.3 6437.3 8132.3 7355.3 7803.8 6743 7381.7 7774.2 6274.6 8769.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28579000 6152 806;3082 5830 11585;11586 9347 9347 1 9606 Homo sapiens 0.0842426669228189 EGEDDFLEK Unmodified 1080.4611 0.46113468 1636 A0A7P0TAV2;A0A6Q8PGK3;A0A7P0T9G7;B7ZLW8;Q99707;B4DST3;A0A7P0TAJ0;Q99707-2 MTR Methionine synthase yes no 0 0 0 1 0 1 50.861 50.861 2 0.016067 14729 20230619_1880_Aki_TMTPro18x_K_F1 74.165 31.344 30549 25861 23330 25661 23279 30901 30311 26328 36511 32191 36371 39618 33897 31017 32870 42176 44423 45025 28199 23677 24323 26011 24440 30747 30331 27384 36813 32458 37237 39594 34657 32857 34132 42331 42396 42732 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25161000 6153 1636 5831 11587 9348 9348 1 9606 Homo sapiens -0.07587744515149097 EGEDMIAEEHFGSEK Oxidation (M) 1722.7043 0.70429485 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 1 0 1 0 1 43.716 43.716 3 1.207E-05 11735 20230619_1880_Aki_TMTPro18x_K_F1 108.66 99.8 118250 95768 95656 108190 122530 141960 128960 141110 170380 126680 141620 166110 162320 143520 140160 194440 192870 224950 109160 87794 99550 108700 125500 140950 130910 143770 169950 130070 147710 166150 164080 151480 146140 196080 184250 213220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132260000 6154 2337;3778;3779 5832 11588 9349 9349 1445 1 9606 Homo sapiens -0.12814912643125353 EGEDMIAEEHFGSEK Unmodified 1706.7094 0.70938023 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 47.593 47.63 3 3.5803000000000003E-25 13354 20230619_1880_Aki_TMTPro18x_K_F1 222.75 204.02 177430 128710 157170 173970 145700 212980 205060 206060 230200 221470 202610 243040 266970 214610 184120 287990 279040 320130 163800 118260 161380 172440 154300 212060 204050 211360 232060 223670 212200 244770 266530 226310 194510 289660 266350 303570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281360000 6155 2337;3778;3779 5832 11589;11590 9350;9351 9350 2 9606 Homo sapiens -0.11570608780493785 EGEDSSVIHYDDK Unmodified 1492.6318 0.63178183 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y5M9 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 0 1 0 1 41.89 41.89 3 0.00051092 10946 20230619_1880_Aki_TMTPro18x_K_F1 91.858 77.6 44127 36907 48859 42026 61804 64973 59248 62339 66914 44525 52430 55970 54245 39470 57011 51404 62885 63864 40845 33833 49394 42350 63067 63903 60120 63358 67088 46324 54596 55754 55407 41933 58214 52173 60118 60523 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40833000 6156 1005 5833 11591 9352 9352 1 9606 Homo sapiens -0.09482878654330307 EGEEAGPGDPLLEAVPK Unmodified 1706.8363 0.8362953 437 A0A024R7B7;Q16543;Q6FG59;A1L0W4;K7EL68 CDC37;MBD5 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 0 0 1 0 1 57.924 57.924 3 0.0043833 17644 20230619_1880_Aki_TMTPro18x_K_F1 68.413 55.276 58958 43138 60697 65627 59730 97994 58554 54084 50689 80133 79474 87378 90432 67715 70251 95417 96215 101800 54494 39688 61561 64771 62313 95517 58913 58997 53380 79783 80706 87689 90938 72014 73363 95709 91846 96603 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 359190000 6157 437 5834 11592 9353 9353 1 9606 Homo sapiens 0.011150604362001104 EGEEEEENTEEPPQGEEEESMETQE Unmodified 2923.0833 0.083275619 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 1 0 1 46.329 46.329 3 1.2526E-05 12841 20230619_1880_Aki_TMTPro18x_K_F1 89.47 89.47 26347 22492 25599 23429 30136 22668 33605 24025 21576 25977 29348 14750 19335 11714 42016 11653 10860 10877 24363 20601 26114 23596 30915 23054 33297 24526 22979 25791 29260 15406 21052 12214 40439 11769 10693 10339 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23636000 6158 2621 5835 11593 9354;9355 9355 2 9606 Homo sapiens -0.3013426881839223 EGEEEQAINR Unmodified 1173.5262 0.52619455 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;B4E263;A2VDI1;B3KWS1;Q8N7L7;B7ZAU8 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 1 0 1 33.078 33.078 2 2.1514E-09 7213 20230619_1880_Aki_TMTPro18x_K_F1 205.12 100.68 32196 18084 44017 41007 59520 65550 49003 53123 48694 39552 54948 60588 58940 47282 55171 28045 62186 63189 29803 16760 43946 39803 60271 64081 50035 54745 49849 41350 56304 60045 59824 48251 56397 30551 59438 59641 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34750000 6159 2332 5836 11594 9356 9356 1 9606 Homo sapiens -0.05362749989285476 EGEEPTVYSDEEEPKDESAR Unmodified 2294.9663 0.96625943 3209 Q6IB11;O00264;O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 yes no 0 0 1 1 0 1 41.337 41.337 3 1.2058E-36 10659 20230619_1880_Aki_TMTPro18x_K_F1 229.6 222.32 57280 42988 51162 53976 52569 55905 55444 53238 61279 56699 72858 62122 72272 55987 80384 72618 82737 81541 52891 39461 52513 53634 54571 56332 55934 54683 62524 57294 74135 62690 74125 58875 81682 73224 79131 77358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56992000 6160 3209 5837 11595 9357 9357 1 9606 Homo sapiens -0.1294250460391595 EGEEVMFK Oxidation (M) 983.427 0.42699778 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 0 2 0 1 45.318 45.4 2 0.083703 12298 20230619_1881_Aki_TMTPro18x_K_F2 62.546 39.527 70593 57446 63148 63221 72854 72374 70735 68032 78567 71438 85311 82323 80096 62730 85328 81275 86015 75813 65216 52650 64900 63520 74809 72434 71696 69905 79835 72349 86983 82443 82118 66339 86687 81091 82222 72103 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48019000 6161 3881 5838 11596 9358 9358 2548 1 9606 Homo sapiens -0.06537864207712119 EGEEVMFK Unmodified 967.43208 0.43208315 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2 0 1 49.721 49.779 2 0.0019957 14340 20230619_1881_Aki_TMTPro18x_K_F2 111.04 31.023 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6162 3881 5838 11597 9359 9359 1 9606 Homo sapiens -0.052935603451032875 EGEFVAQFK Unmodified 1053.5131 0.51311067 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 5 0.707 1 2 1 54.509 54.562 3 0.00033817 15825 20230619_1886_Aki_TMTPro18x_K_F6 110.55 72.466 291800 245920 283350 281640 260490 280660 303090 293380 288100 305310 288350 272160 330420 268440 301170 347510 285020 291410 269810 225440 288180 281620 273380 284260 302760 299200 294570 306860 297630 277840 334370 281210 306140 344690 272910 277350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2393400000 6163 654 5839 11598;11599;11600;11601 9360;9361;9362 9362 3 9606 Homo sapiens -0.011505363107289668 EGELTVAQGR Unmodified 1058.5356 0.53563702 1473 Q03252;A0A384NPH0 LMNB2 Lamin-B2 yes no 0 0 0 2 0 1 38.136 38.199 2 1.5078E-06 8953 20230619_1881_Aki_TMTPro18x_K_F2 172.25 104.75 171600 125160 134530 145500 182140 218610 198850 194140 321760 110720 126140 130200 138670 111990 133450 122180 158740 126950 158290 114820 140580 146230 186340 214880 203040 197750 312300 117430 139180 130750 140970 116680 137110 122940 151410 120640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 408970000 6164 1473 5840 11602 9363 9363 1 9606 Homo sapiens 0.008710630869245506 EGEMEQVENGLK Unmodified 1361.6133 0.613295 2804 CON__Q9N2I2 yes yes 0 0 0 1 0 1 50.9 50.9 3 0.0098387 14718 20230619_1880_Aki_TMTPro18x_K_F1 67.519 43.914 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6165 2804 5841 11603 9364 9364 1 -0.05304711829876396 EGENTQVAEPEACDQMYESLAR Oxidation (M) 2542.0588 0.058796385 4421 Q9BRT2;V5IRT4 UQCC2 Ubiquinol-cytochrome-c reductase complex assembly factor 2 yes no 0 1 0 1 0 1 46.858 46.858 3 0.00045295 13084 20230619_1880_Aki_TMTPro18x_K_F1 71.651 63.753 6890.9 6763.2 6527.8 7027.2 6529.9 7801.1 7808.4 6675 9941.4 7608.5 9562.2 8011.8 9889.2 8526.6 9274.4 11453 11135 8146.4 6377 6191.3 6665.9 7087.5 6825.3 7806.2 7861.4 6926.4 9980.3 7660.9 9832.3 8148 10057 8926.6 9555.3 11272 10615 7783.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31076000 6166 4421 5842 11604 9365 9365 2770 1 9606 Homo sapiens -0.1505506613361831 EGERPSLR Unmodified 942.48829 0.4882929 4152 Q7L2H7;J3KNJ2;E9PN86;E7ESM3;B4DT09 EIF3M Eukaryotic translation initiation factor 3 subunit M yes no 0 0 1 3 0.816 1 1 1 28.289 28.375 3 0.0047774 4905 20230619_1882_Aki_TMTPro18x_K_F3 86.136 60.019 88403 52265 81661 90091 97808 102870 95730 84208 128930 92022 109020 115180 115190 99989 89380 90284 118960 108030 81551 48212 83802 87960 100290 102590 97619 87587 128550 93396 113070 115300 116190 103130 92968 91897 113460 102460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 345180000 6167 4152 5843 11605;11606;11607 9366;9367 9366 2 9606 Homo sapiens 0.014748286065696448 EGESGECAVAESEDR Unmodified 1623.6319 0.63185819 3035 Q8NFC6;H0Y9Y2 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes no 0 0 0 1 0 1 35.375 35.375 3 0.0003286 8157 20230619_1880_Aki_TMTPro18x_K_F1 89.911 84.832 13436 6678.7 12294 11163 15526 15881 13935 16250 17958 14516 14395 16452 15018 13293 15164 9286.3 17627 17683 12385 6164.3 12623 10965 15828 15703 14271 16515 17921 14825 14981 16484 15322 13616 15519 9886.2 16842 16706 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28886000 6168 3035 5844 11608 9368 9368 1 9606 Homo sapiens -0.15501246716667083 EGETIIELK Unmodified 1030.5546 0.55464113 969 A0A2R8Y484;A0A0A1TSG4;Q08722-2;Q08722-3;Q08722-4;Q08722 CD47 Leukocyte surface antigen CD47 yes no 0 0 0 3 0.816 1 1 1 54.032 54.066 2 3.9048E-07 16225 20230619_1881_Aki_TMTPro18x_K_F2 152.34 84.114 94580 84265 90069 90101 87436 108440 94023 95749 124070 101320 101520 114180 119920 105990 94871 135450 124400 130320 87470 77183 91841 90792 91363 107970 95357 98839 123760 102560 106090 115070 120690 111120 98769 135230 118780 123810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 289720000 6169 969 5845 11609;11610;11611 9369;9370 9369 2 9606 Homo sapiens 0.040585996579466155 EGETMILTLK Unmodified 1133.6002 0.60021112 3252 O43290;B4DDH9;B4DMR4 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 0 5.5 0.5 1 1 58.764 58.823 3 0.0028944 17678 20230619_1886_Aki_TMTPro18x_K_F6 66.595 45.818 27914 24018 29336 29832 23986 36591 34365 32467 34702 34527 32594 33051 34830 30272 36232 35318 34806 39296 25830 22034 29622 29737 25684 36365 34058 33509 35254 34742 33655 33523 35546 31593 36736 35636 33347 37265 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35530000 6170 3252 5846 11612;11613 9371 9371 1 9606 Homo sapiens 0.03875501848665408 EGETVEPYK Unmodified 1050.487 0.4869555 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 2 0.816 1 1 1 42.315 42.362 2 9.2609E-05 11127 20230619_1880_Aki_TMTPro18x_K_F1 176.6 126.56 494970 284010 376630 506200 491280 589480 507020 534900 798330 653180 710180 808500 866130 777380 512740 758030 1040300 991040 455930 262150 395020 493440 502900 588020 519080 553350 792960 659060 739670 812300 863130 802020 557980 774350 989940 939010 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 367080000 6171 3811 5847 11614;11615;11616 9372;9373;9374 9372 3 9606 Homo sapiens -0.03626850272848969 EGFDALDPFIPILVSNYNPK Unmodified 2248.1416 0.14158544 3623 P51398-2;P51398-3;P51398 DAP3 28S ribosomal protein S29, mitochondrial yes no 0 0 0 8 0 1 66.692 66.711 3 0.0058942 20644 20230619_1888_Aki_TMTPro18x_K_F8 63.46 53.121 2887 1827.9 3869.8 4271.2 3571.6 3009.3 3004.6 3851.8 3469.8 3627.5 4645.6 3687.4 3643.7 3713.3 4102.5 5145.6 3571.1 3908.4 2673.2 1693.9 3845 4092.3 3708.8 3156.5 3083 3870.7 3554.7 3678.4 4661.3 3749.7 3775.3 3900.2 4140.7 5075.8 3424.3 3724.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16493000 6172 3623 5848 11617 9375 9375 1 9606 Homo sapiens 0.0674403150960643 EGFHFEETLTGFK Unmodified 1540.7198 0.71980898 4351 Q96G03;B4DN40;Q96G03-2;H0Y921 PGM2 Phosphoglucomutase-2 yes no 0 0 0 5 0.816 1 1 1 58.361 58.403 3 4.5918E-06 17442 20230619_1886_Aki_TMTPro18x_K_F6 127.71 113.28 70555 65194 75818 79020 69250 82876 90739 85230 102570 81332 79490 79090 90049 69835 83997 96962 83373 94271 65333 59778 76523 78732 73062 83552 90584 86823 102840 82375 83115 80126 91244 73810 85563 96806 79853 89527 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165230000 6173 4351 5849 11618;11619;11620 9376 9376 1 9606 Homo sapiens -0.028922132730940575 EGFLESFKK Unmodified 1083.5601 0.56006086 878 E7EVY0;A0A384NLA7;A0A087X0L7;J3KNA0;Q15070-2;Q15070;Q2M1J6 OXA1L Mitochondrial inner membrane protein OXA1L yes no 0 0 1 1.5 0.5 1 1 54.708 54.72 3 0.0026936 16299 20230619_1880_Aki_TMTPro18x_K_F1 88.37 51.609 116760 99386 105070 130070 122320 152520 138110 143600 178360 150080 170040 165930 154940 133360 168350 148020 158690 182130 107910 91227 108160 129070 126340 152250 139560 147470 178960 151860 174190 166620 159250 139460 170320 150490 152090 172540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239570000 6174 878 5850 11621;11622 9377 9377 1 9606 Homo sapiens 0.02162323240418118 EGFYDLSSEDPFGCK Unmodified 1749.7192 0.71921663 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;A0A7I2V3I5;A0A7I2V2T9;A0A7I2V3J7;A0A7I2V682;A0A7I2V407;A0A7I2V2J0;A0A7I2V5R0;E7EPA6;A0A7I2V2R2;A0A7I2V5T9;C9J296 LAMB1 Laminin subunit beta-1 yes no 0 0 0 4.5 0.5 1 1 62.152 62.178 3 0.011182 19251 20230619_1883_Aki_TMTPro18x_K_F4 63.727 53.242 26722 23373 25717 26474 29181 34808 33722 36187 38678 35475 34080 34228 35424 27246 34726 43649 35468 41973 24712 21421 26273 26602 30183 34591 33889 36831 38939 35849 35248 34590 36063 29216 35419 43472 33973 39860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85987000 6175 3015 5851 11623;11624 9378 9378 1 9606 Homo sapiens -0.12565420775081293 EGGAEESAIR Unmodified 1017.4727 0.47270242 49 G5EA31;A0A024QZM6;P53992;B4DSN3 SEC24C Protein transport protein Sec24C yes no 0 0 0 1 0 1 32.703 32.703 2 2.3314E-05 7074 20230619_1880_Aki_TMTPro18x_K_F1 158.76 131.5 41620 18137 55311 59652 74598 85983 60835 73854 72489 47818 80731 95341 64065 64779 75661 35297 88138 88402 38478 16973 55367 57071 75598 84555 62544 75566 73385 51186 81831 93496 66539 66267 77190 39055 84211 83400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87392000 6176 49 5852 11625 9379 9379 1 9606 Homo sapiens -0.035335027011228703 EGGDFVCCALSPR Unmodified 1466.6282 0.62823356 1896 A0MNN4;Q2TAY7;Q2TAY7-2 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 51.329 51.381 2 2.8569E-15 14332 20230619_1885_Aki_TMTPro18x_K_F5 208.17 191.15 144090 123340 128600 139930 132130 152260 144680 132190 155990 180890 179860 174700 200800 156280 175380 205080 186440 187180 133160 113050 132060 140130 137390 152600 145510 137780 159380 180000 184300 177040 202960 164440 179560 204220 178280 177980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 111440000 6177 1896 5853 11626;11627 9380;9381;9382 9382 3 9606 Homo sapiens -0.08641543233534321 EGGDGEEQDVGDAGR Unmodified 1489.5917 0.59170793 4224 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 1 0 1 32.756 32.756 3 0.00045148 7078 20230619_1880_Aki_TMTPro18x_K_F1 67.846 64.895 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6178 4224 5854 11628 9383 9383 1 9606 Homo sapiens -0.13350425324892967 EGGGAIEEEAK Unmodified 1088.4986 0.49858282 645 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 0 0 0 1 0 1 39.906 39.906 2 0.00015927 10067 20230619_1880_Aki_TMTPro18x_K_F1 132.78 47.048 25414 13371 28202 28537 33836 40487 27603 34971 36135 25327 40955 44051 34983 32240 31894 22618 40523 45185 23469 12383 28502 27698 34566 39863 28488 35831 36463 26695 41543 43446 35765 33147 32910 24179 38721 42661 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19927000 6179 645 5855 11629 9384 9384 1 9606 Homo sapiens -0.042126532495103675 EGGGSLAEYHAK Unmodified 1217.5677 0.56766543 2781 CON__P15497 yes yes 0 0 0 4.5 0.5 1 1 37.968 38.036 3 4.4473E-07 8715 20230619_1883_Aki_TMTPro18x_K_F4 153.49 128.45 + 33751 85274 111340 42904 200690 188660 133270 143530 212320 155950 257280 368230 152540 176890 216430 157310 232810 379050 32210 77573 107560 48955 199260 178870 140740 149940 213240 163390 258060 357110 162360 187690 219590 170940 223600 357130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 359640000 6180 2781 5856 11630;11631 9385 9385 1 -0.03241569229953711 EGGLGPLNIPLLADVTR Unmodified 1733.9676 0.96758424 3538 V9HW12;P32119;B4DF70;A6NIW5 HEL-S-2a;PRDX2 Peroxiredoxin-2 yes no 0 0 0 4.5 3.5 1 1 64.879 64.889 3 1.6699999999999998E-19 20450 20230619_1880_Aki_TMTPro18x_K_F1 192.96 173.31 68183 62400 62610 79796 47946 64247 60177 60829 65235 80615 81868 103090 98635 94499 61555 135050 127950 145540 63051 57249 63954 78923 51395 66050 60171 62967 66912 81074 84045 103370 98525 99859 67324 135390 121900 138060 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1280700000 6181 3538 5857 11632;11633 9386;9387;9388 9387 3 9606 Homo sapiens 0.1299591559475175 EGGTVVYGGK Unmodified 965.48181 0.48181054 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;A0A1B0GW82;A0A1B0GUA1;A0A1B0GTJ4;A0A1B0GV49 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 5 0 1 41.709 41.794 2 1.0107E-10 10266 20230619_1885_Aki_TMTPro18x_K_F5 163.32 110.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6182 1415 5858 11634 9389 9389 1 9606 Homo sapiens -0.0023110934479291245 EGGVTFTWVEK Unmodified 1251.6136 0.61355299 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2YQI1;A0A7I2V4R2;B7ZA24;P40763-3;P40763-2;A0A7I2YQD2;A0A7I2V4R3;A0A7I2V395;A0A7I2V2G1;A0A7I2V552;B5BTZ6 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 0 0 6.5 0.5 1 1 59.023 59.08 2 0.00084291 17755 20230619_1886_Aki_TMTPro18x_K_F6 128.03 96.961 55818 44992 55212 65113 63855 79354 80062 80347 74039 107740 96997 101170 104050 87744 95200 112710 104730 120230 51604 41353 56358 64260 66109 79138 79601 82711 76846 107140 98788 102520 105540 92304 97591 113220 100220 114060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122550000 6183 1660 5859 11635;11636 9390 9390 1 9606 Homo sapiens -0.0021892404772643204 EGHGLGSLGK Unmodified 953.49304 0.49304393 458 A8K5G0;A0A024R7K0;M0R2Z9;Q8IX01-4;Q8IX01-3;Q8IX01;B4DSQ4 SFRS14;SUGP2 SURP and G-patch domain-containing protein 2 yes no 0 0 0 7 0 1 38.919 38.982 3 0.0028709 8836 20230619_1887_Aki_TMTPro18x_K_F7 78.342 42.986 56550 26829 56264 59716 63991 54066 61873 66322 69587 60186 83598 85032 79283 63539 57877 72685 74808 71823 52151 24880 57292 57488 65671 55365 62780 66754 70952 61891 84897 84485 80008 66724 60246 72813 71391 68238 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48542000 6184 458 5860 11637 9391 9391 1 9606 Homo sapiens 0.014437127493465596 EGHPVTSEPSRPEPAVFK Unmodified 1962.9799 0.97993984 1461 Q53EW8;A0A384NKQ2;Q16762;B4DVZ4 TST Sulfurtransferase;Thiosulfate sulfurtransferase yes no 0 0 1 5 0 1 39.591 39.681 4 0.0083232 9420 20230619_1885_Aki_TMTPro18x_K_F5 68.82 56.329 36187 14239 36512 42629 55315 49710 54323 58466 61009 44734 47728 45908 48943 42674 38398 51154 47569 44676 33355 13304 37379 40756 55849 49892 55017 58730 61203 45996 49624 46477 49432 44558 39807 50874 45405 42513 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47294000 6185 1461 5861 11638 9392 9392 1 9606 Homo sapiens 0.03696907267089955 EGIAASFAVK Unmodified 991.53385 0.53384611 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;Q75MG1;E9PFD4;E7EMS9 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 0 7.5 0.5 1 1 53.602 53.671 2;3 5.1529E-05 15111 20230619_1888_Aki_TMTPro18x_K_F8 117.7 67.345 309290 276980 294590 297690 330120 398480 363210 366590 481830 226890 220680 200630 210440 185100 235150 225170 218330 207310 286050 253710 301100 300380 341470 394510 367730 372880 472900 236520 238190 204550 216430 193540 237690 224690 208980 197130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 234560000 6186 607 5862 11639;11640 9393;9394 9394 2 9606 Homo sapiens 0.037740540689469526 EGICGSCAMNINGGNTLACTR Oxidation (M) 2270.9501 0.95005475 842 A0A087WXX8;A0A087WWT1;P21912 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes no 0 1 0 6 0 1 39.903 39.992 3 0.0067855 9544 20230619_1886_Aki_TMTPro18x_K_F6 57.045 53.947 6009.9 5769.3 4664.6 7451 5784 7232.4 7140.6 7417.5 8867.9 6030.2 6081.4 5669.4 8081.7 6564.9 6638 8478.8 7859.3 6940.4 5552.9 5292.7 4886.4 7378.8 5967.9 7330.8 7169.7 7528.9 8817.6 6164.7 6455.1 5811.7 8116.9 6843.2 6852.4 8398.5 7501.5 6611.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12957000 6187 842 5863 11641 9395 9395 499 1 9606 Homo sapiens -0.13458227118690047 EGIDPTPYYWYTDQR Unmodified 1902.8424 0.84244331 3265 O43776;B4DN60 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0 1 59.88 59.932 3 0.065396 17872 20230619_1885_Aki_TMTPro18x_K_F5 40.754 35.475 72438 64700 72175 80112 76969 84265 90575 84419 93722 92450 96459 104880 99857 85999 108980 104280 101560 116290 67018 59344 73470 79692 79909 84903 90621 86475 95417 93370 99088 105250 102240 90307 110220 105180 97348 110270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48027000 6188 3265 5864 11642 9396 9396 1 9606 Homo sapiens -0.07286421332310056 EGIESGDPGTDDGR Unmodified 1403.5801 0.58008061 3822 Q12797;Q12797-10 ASPH Aspartyl/asparaginyl beta-hydroxylase yes no 0 0 0 1 0 1 36.19 36.19 2 1.0132E-28 8427 20230619_1880_Aki_TMTPro18x_K_F1 260.97 255.36 50047 24883 42385 51755 83168 97672 82737 75507 118600 69914 87110 95172 87002 79198 76034 67653 106120 102180 46105 23042 44397 50572 83273 94687 84436 78502 117360 71855 90885 94876 88359 81626 79115 70137 101220 96704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100810000 6189 3822 5865 11643 9397 9397 1 9606 Homo sapiens -0.10556622348235578 EGIIHTLIVDNR Unmodified 1378.7569 0.75686319 4607 Q9NVQ4;Q9NVQ4-3;Q9NVQ4-2 FAIM Fas apoptotic inhibitory molecule 1 yes no 0 0 0 6 0 1 51.591 51.668 3 8.4113E-07 14632 20230619_1886_Aki_TMTPro18x_K_F6 122.46 86.749 64730 50786 57872 62814 57270 60106 65157 68408 76519 64643 61175 53974 68425 53950 65227 63652 62187 55715 59786 46604 59376 62426 59750 61185 65596 69201 76683 65224 63766 55310 69423 56186 66203 63380 59485 53026 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89536000 6190 4607 5866 11644 9398 9398 1 9606 Homo sapiens 0.08263503063380995 EGIILFK Unmodified 818.49019 0.49019038 2662 B5BUB5;P05455;Q14730 SSB Lupus La protein yes no 0 0 0 5.33 3.09 1 1 1 59.703 59.731 2 0.016136 17646 20230619_1888_Aki_TMTPro18x_K_F8 110.35 13.383 3356500 2898700 3221900 3691700 3504800 4040900 3881700 3886100 4773400 4216300 3981500 3824100 4242500 3465800 3879600 4580800 4040400 4459700 3103700 2659800 3291700 3667000 3630900 4055500 3918800 3989300 4780500 4232900 4132600 3889200 4303900 3647000 3964400 4576300 3867200 4235600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 897220000 6191 2662 5867 11645;11646;11647 9399;9400;9401 9400 3 9606 Homo sapiens 0.0736848936246588 EGILPERAEEAK Unmodified 1340.6936 0.69359423 1982 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7;O43768-8 ENSA Alpha-endosulfine yes no 0 0 1 2.5 1.12 1 1 1 1 42.92 42.968 3 0.0027946 10867 20230619_1882_Aki_TMTPro18x_K_F3 76.868 39.254 579680 480300 521500 552140 545130 558370 589260 610460 658500 629690 695660 646960 692800 608160 644180 692570 699830 666340 535610 440340 535080 552010 565380 565590 593890 620520 668320 635880 711560 654990 704980 632950 659230 693090 668820 633300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 922410000 6192 1982 5868 11648;11649;11650;11651 9402 9402 1 9606 Homo sapiens 0.036875175554541784 EGILSDEIYCPPETAVLLGSYAVQAK Unmodified 2822.4048 0.40481236 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;J7M2B1 EZR;HEL-S-105;EZR-ROS1 Ezrin;Tyrosine-protein kinase receptor yes no 0 0 0 8 0 2 65.013 65.032 3;4 2.2309E-05 19972 20230619_1888_Aki_TMTPro18x_K_F8 80.293 73.017 11408 8464.1 9673.2 10938 9508.2 10184 9510.8 12487 10302 13446 14881 16162 17673 15914 19180 20493 18497 20539 10530 7772.3 9973.6 10835 9892 10408 9629.4 12616 10648 13610 15191 16287 18024 16660 19448 20518 17719 19500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 24046000 6193 3456 5869 11652;11653 9403;9404 9404 2 9606 Homo sapiens 0.06650614321597459 EGIPALDNFLDK Unmodified 1330.6769 0.67688153 3447 P13639;Q8TA90;B4DPU3 EEF2 Elongation factor 2 yes no 0 0 0 6 0 1 63.215 63.263 3 0.066586 19527 20230619_1886_Aki_TMTPro18x_K_F6 41.644 23.978 78415 64341 65363 75542 59659 75389 70385 64831 91038 89117 86007 81774 98464 87337 78964 112500 93912 105400 72410 59002 67466 75361 62852 76001 70979 67642 91398 88588 88974 83595 99212 91224 81656 112150 89789 100140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66848000 6194 3447 5870 11654 9405 9405 1 9606 Homo sapiens 0.024770166694906948 EGIPALDNFLDKL Unmodified 1443.7609 0.76094551 3447 P13639;Q8TA90;B4DPU3 EEF2 Elongation factor 2 yes no 0 0 1 6.29 1.03 2 2 2 1 65.794 65.829 2;3 4.2761E-06 20640 20230619_1886_Aki_TMTPro18x_K_F6 131.32 89.701 257500 208000 237260 248660 199460 227040 235340 226770 246530 290410 295660 278300 297960 240010 258420 318840 277980 311510 237930 190780 242190 247550 211220 231270 235690 233470 252660 289620 300990 281870 302030 253080 264910 318530 266010 295830 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 6461099999.999999 6195 3447 5871 11655;11656;11657;11658;11659;11660;11661 9406;9407;9408;9409;9410 9407 5 9606 Homo sapiens 0.05681547766403128 EGIPPDQQR Unmodified 1038.5094 0.50942227 1332;3737 Q5RKT7;A0A248RGE3;P62979;B2RDW1;Q96H31;Q5U5U6;Q9UFQ0;Q96C32;Q96MH4;L8B196;F5H747;J3QKN0;L8B4R0;A8K674;L8B4J3;L8B4Z6;L8B4M0;Q66K58;F5GXK7;Q5PY61;P0CG48;L8B4I8;B4DV12;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H265;F5H2Z3;Q5UGI3;F5H388;Q59EM9;P0CG47;M0R1M6;Q49A90;M0R1V7;F5GZ39;J3QSA3;P62987;Q3MIH3;M0R2S1 RPS27A;HEL112;UBC;UBB;DKFZp434K0435;UbC;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 no no 0 0 0 2 0.866 3 2 3 32.809 32.856 2 9.765E-05 7048 20230619_1881_Aki_TMTPro18x_K_F2 156.01 111.03 181540 103050 189180 212860 234200 353800 190350 213020 433500 179300 261120 283860 271110 263690 203620 151000 308440 404430 167600 95343 192450 207400 239810 343330 201850 226400 420020 186970 276390 282520 273570 266930 213730 167880 294760 381090 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 474540000 6196 1332;3737 5872 11662;11663;11664;11665;11666;11667;11668;11669 9411;9412;9413;9414;9415;9416;9417;9418;9419;9420 9416 10 9606 Homo sapiens -0.00829206084586076 EGIPPQQQR Unmodified 1051.5411 0.54105675 2932 F8VSA6;E9PS38;S4R3E9;E9PL57;Q15843 NEDD8;NEDD8-MDP1 NEDD8 yes no 0 0 0 3.5 0.5 1 1 32.005 32.075 2 0.0032846 6505 20230619_1882_Aki_TMTPro18x_K_F3 98.523 67.911 25397 14122 30695 30576 40754 41790 33092 32417 43276 27762 46093 45678 36512 33875 43390 22170 52167 47564 23477 13078 30885 29636 41308 41168 34129 33651 43542 28885 46745 45138 37920 34729 44362 23958 49797 44925 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33880000 6197 2932 5873 11670;11671 9421;9422 9421 2 9606 Homo sapiens 0.0173478666936262 EGIREETVSLR Unmodified 1287.6783 0.67827852 1227 Q53FT8;A0A140VK45;P20618 PSMB1 Proteasome subunit beta type;Proteasome subunit beta type-1 yes no 0 0 1 3 0 1 38.633 38.687 3 8.7571E-05 9038 20230619_1882_Aki_TMTPro18x_K_F3 126.76 76.481 111790 86311 97193 121950 121910 167270 154210 155870 594170 130420 103660 120650 140060 126800 110910 144650 128350 130970 103220 79322 100550 120740 126800 165290 166530 159290 559220 134070 130900 123120 140740 131500 114440 144220 122650 124530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 262560000 6198 1227 5874 11672 9423 9423 1 9606 Homo sapiens 0.045946507582812046 EGITDTAQTIYETAAR Unmodified 1738.8374 0.83735793 4329 Q96BY7 ATG2B Autophagy-related protein 2 homolog B yes yes 0 0 0 4.5 0.5 1 1 57.137 57.169 3 0.00041363 16717 20230619_1885_Aki_TMTPro18x_K_F5 81.713 69.153 49479 31922 34796 34318 24760 36390 35067 36066 57146 30506 32889 46356 43205 44508 54702 49236 43433 50283 45579 29280 36421 34512 26946 36620 35432 36730 55907 31676 35459 46266 44372 46172 54772 49484 41713 47722 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21346000 6199 4329 5875 11673;11674 9424 9424 1 9606 Homo sapiens -0.0025072519488276157 EGITTYFSGNCTMEDAK Oxidation (M) 1938.7975 0.79754331 2654 B4E357;Q5JPB8;Q53HL4;Q53GT4;G3V1D3;G3V180;Q9NY33-4;Q9NY33;E9PQ14;E9PNX5;E9PKK8;E9PPK9 DKFZp686O1117;DPP3 Dipeptidyl peptidase 3 yes no 0 1 0 5 0 1 53.601 53.671 3 0.00028849 15353 20230619_1885_Aki_TMTPro18x_K_F5 73.833 64.176 32658 24588 30847 32758 28097 37810 33724 32946 36391 39178 39537 40311 42473 32497 38503 38623 39460 42724 30169 22585 31465 32469 29611 37716 33769 34163 37065 39290 40552 40595 43037 34128 39276 38945 37768 40524 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70014000 6200 2654 5876 11675 9425 9425 1605 1 9606 Homo sapiens -0.1343035625216089 EGIVALR Unmodified 756.44939 0.4493882 765;2549 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2;B4DN39 CCT6A T-complex protein 1 subunit zeta no no 0 0 0 5.5 1.12 1 1 1 1 43.995 44.069 2 0.015939 11243 20230619_1886_Aki_TMTPro18x_K_F6 110.61 10.545 1348600 1108900 1120200 1233500 1368900 1698500 1354800 1273900 1997200 1297000 1313400 1282000 1390400 1086000 1253600 1553100 1495900 1338700 1245300 1016300 1161600 1241400 1405100 1672300 1385700 1331400 1969000 1311100 1382600 1296300 1410100 1151500 1292100 1540300 1427800 1274300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1697599999.9999998 6201 765;2549 5877 11676;11677;11678;11679 9426;9427;9428 9428 3 9606 Homo sapiens 0.061421480428521136 EGIVALRR Unmodified 912.5505 0.55049923 765;2549 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2;B4DN39 CCT6A T-complex protein 1 subunit zeta no no 0 0 1 1.5 0.5 1 1 37.004 37.034 3 0.0022428 8518 20230619_1881_Aki_TMTPro18x_K_F2 109.36 53.681 211900 254340 232800 193210 284870 208290 212530 247060 232160 227610 258840 249300 274800 214900 233980 231480 296140 266150 196670 232170 235100 200810 288950 210950 219330 249060 236590 231640 264920 250980 277920 223830 242030 234320 282540 252540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118800000 6202 765;2549 5878 11680;11681 9429;9430 9430 2 9606 Homo sapiens 0.09072599745559273 EGIVTATEQEVK Unmodified 1302.6667 0.66671078 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3;Q5CAQ4;I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 2.5 0.5 2 2 50.434 50.497 2;3 2.4906E-17 14366 20230619_1882_Aki_TMTPro18x_K_F3 263.3 167.78 545040 411680 474900 600930 470510 552810 503760 526260 712900 692270 706200 841420 860320 798280 595120 1007000 1021800 1132000 503200 378520 488940 590310 490800 561840 512580 544130 714360 695500 732160 845990 861540 835730 635670 1014200 974260 1073400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1496199999.9999998 6203 1211 5879 11682;11683;11684;11685 9431;9432;9433 9433 3 9606 Homo sapiens 0.027484089442850745 EGIYEAHIR Unmodified 1086.5458 0.54580778 2438 B3KXK0;E9PE15;P51790-4;P51790-5;P51790;P51790-2 CLCN3 Chloride channel protein;H(+)/Cl(-) exchange transporter 3 yes no 0 0 0 3.5 0.5 1 1 37.584 37.632 3 0.00010019 8647 20230619_1882_Aki_TMTPro18x_K_F3 129.63 108.16 30036 19881 33996 31068 35067 36388 40708 40373 59213 39799 39499 38732 47752 33950 39525 36631 50434 44002 27771 18305 34206 30528 36492 36472 41269 40943 58434 40259 41799 39200 48058 35368 40916 37190 48105 41739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36918000 6204 2438 5880 11686;11687 9434 9434 1 9606 Homo sapiens 0.0059967081210743345 EGKEEAEETNVLPK Unmodified 1571.7679 0.76788138 1532 A0A3B3IUD7;Q14690;B4DH82 PDCD11 Protein RRP5 homolog yes no 0 0 1 2 1 1 1 44.735 44.808 3 3.9841E-05 11765 20230619_1882_Aki_TMTPro18x_K_F3 108.89 78.76 82599 60562 70102 83696 95840 105410 97396 98749 116320 107690 118650 117340 121830 98617 103010 135790 131370 131950 76232 55656 72731 82867 97604 104760 98673 101560 117510 108670 121740 118110 123340 104320 106830 135540 125420 125360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84332000 6205 1532 5881 11688;11689 9435;9436 9436 2 9606 Homo sapiens 0.00486815856334033 EGKPEIEGKPESEGEPGSETR Unmodified 2241.0397 0.039699148 1458 D6RD44;A0A384NKK0;Q96EI5;Q96EI5-2 TCEAL4 Transcription elongation factor A protein-like 4 yes no 0 0 2 3 0 1 39.782 39.838 4 0.029209 9536 20230619_1882_Aki_TMTPro18x_K_F3 47.808 47.321 29485 19758 28327 25098 30368 28752 30197 31488 36960 34173 34943 36339 33844 29158 31897 39331 35849 33910 27224 18148 28875 24970 31352 28871 30674 32040 37189 34456 35907 36552 34491 30838 32728 39037 34248 32272 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31996000 6206 1458 5882 11690 9437 9437 1 9606 Homo sapiens -0.03117911370782167 EGKPTIVEEDDPELFK Unmodified 1844.9044 0.90437487 3321 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 1 2.5 0.5 1 1 55.053 55.084 3 8.1667E-11 16619 20230619_1881_Aki_TMTPro18x_K_F2 146.88 103.08 112260 100610 112000 128180 105150 136180 126870 116920 140040 149170 152140 140980 161040 140230 132600 174210 150950 166840 103860 92303 113820 127250 110510 136610 127080 121690 142460 148810 155820 143550 162750 146470 136590 173980 144360 158490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 417750000 6207 3321 5883 11691;11692 9438 9438 1 9606 Homo sapiens 0.01571885296198161 EGKTDYYAR Unmodified 1101.5091 0.50908792 1916 A2RUM7;P46777;Q59GX9;A0A2R8Y4A2;Q9BUV4;R4GNJ2 RPL5 60S ribosomal protein L5 yes no 0 0 1 5 0 1 35.332 35.422 3 0.014504 7719 20230619_1885_Aki_TMTPro18x_K_F5 74.376 51.636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6208 1916 5884 11693 9439 9439 1 9606 Homo sapiens -0.03760625804443407 EGLEETLR Unmodified 945.47673 0.47672516 2388 B3KQI5;P07196;I6L9F6 NEFL Neurofilament light polypeptide no no 0 0 0 1.5 0.5 1 1 42.856 42.856 2 0.0057087 11144 20230619_1881_Aki_TMTPro18x_K_F2 102.51 43.533 168900 136750 174040 134110 68522 98104 89734 86456 127380 159460 199090 201910 193840 168090 174450 188500 224880 235600 156210 125210 174490 135380 80349 101750 90689 91211 130520 158500 200640 201880 197110 175620 180590 191690 214750 223240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92201000 6209 2388 5885 11694;11695 9440;9441 9441 2 9606 Homo sapiens 0.0018058679256682808 EGLEIVK Unmodified 786.44872 0.4487195 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 4 0.816 1 1 1 49.701 49.763 3 0.021511 13855 20230619_1883_Aki_TMTPro18x_K_F4 74.423 12.862 209070 168100 188340 217080 239600 235820 246430 235470 319490 230750 259830 235820 242610 199660 237510 274210 271260 254380 193150 154310 193980 215410 244930 237090 250200 240490 318640 233790 268470 238150 247940 211090 243670 273140 259100 241880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 286750000 6210 3444 5886 11696;11697;11698 9442;9443 9443 2 9606 Homo sapiens 0.04695308603140802 EGLELLK Unmodified 800.46437 0.46436956 293;3183 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2;L0R849 ENO1;EDARADD Alpha-enolase;Enolase no no 0 0 0 5.5 1.12 1 1 1 1 55.084 55.138 2 0.017198 15866 20230619_1885_Aki_TMTPro18x_K_F5 108.92 25.081 7788300 6521100 5990500 7097800 6959200 7533700 7325000 7697300 9587700 9634600 9387300 8688100 6118100 10713000 2777300 15578000 3491800 10664000 7188900 5975400 6255900 7128300 7169000 7592000 7434300 7901700 9630900 9608800 9484200 8948800 6227200 11208000 2999300 15261000 3383600 10155000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 9802900000 6211 293;3183 5887 11699;11700;11701;11702 9444;9445;9446 9445 3 9606 Homo sapiens 0.0561559512018448 EGLELPEDEEEK Unmodified 1415.6304 0.63038485 751;3177;4017 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7;Q58FG0;A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9;Q58FF7;Q58FF6 EL52;HSP90AA1;HSP90AA5P;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 no no 0 0 0 3.38 2.18 2 2 1 1 1 1 50.719 50.77 2;3 1.1711E-09 14615 20230619_1880_Aki_TMTPro18x_K_F1 230.84 172.4 659850 541020 587130 623850 635500 737920 663270 662440 781920 822250 811510 835680 926380 719980 430480 1081800 569350 890480 609590 496050 603460 624790 657640 735850 670920 686170 791550 822830 835590 844270 917750 765620 457950 1068500 545630 846630 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 44856000000 6212 3177;751;4017 5888 11703;11704;11705;11706;11707;11708;11709;11710 9447;9448;9449;9450 9447 4 9606 Homo sapiens -0.06080512743096733 EGLELPEDEEEKK Unmodified 1543.7253 0.72534787 751;3177;4017 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7;Q58FG0;A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9;Q58FF7;Q58FF6 EL52;HSP90AA1;HSP90AA5P;HSP90AB1;HSP90AB3P;HSP90AB4P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4 no no 0 0 1 1.8 0.748 2 2 1 47.916 47.96 3;4 3.6182E-05 13530 20230619_1880_Aki_TMTPro18x_K_F1 117.07 94.198 713160 597760 600430 731620 631860 651980 685910 656910 751570 913190 891570 863670 925340 726780 697480 1064100 1002200 928820 658680 548340 620500 726730 655220 665740 690620 677870 768380 907310 909150 874690 932360 772170 732080 1055200 955400 883900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 11692000000 6213 3177;751;4017 5889 11711;11712;11713;11714;11715 9451;9452;9453 9451 3 9606 Homo sapiens -0.024765792719335877 EGLHYTEVCGYDIASPNAGPLFR Unmodified 2565.1958 0.19582263 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 6.5 0.5 1 1 58.877 58.934 3 3.0553E-34 17370 20230619_1887_Aki_TMTPro18x_K_F7 200.99 193.24 15926 15377 13873 16296 14320 15714 14864 15876 14306 17271 14810 17105 19082 14219 13609 17596 17733 19013 14727 14080 14283 16380 14854 15946 14947 16245 14652 17364 15371 17264 19069 14955 14184 17695 16936 18039 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126320000 6214 1552 5890 11716;11717 9454 9454 1 9606 Homo sapiens -0.024167444011254702 EGLLAIFK Unmodified 889.5273 0.52730417 173;209 A0A2R8Y804;B4DSW9;A0A2R8Y543;A0A2R8Y5C3;B4DL06;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y7Z0;B5BU28;A0A024R2Q3;A0A2R8Y5A3;P35222;A0A0S2Z487;A0A024R1X8;P14923;C9JTX4;C9J826;C9JK18;C9JKY1 CTNNB1;JUP Catenin beta-1;Junction plakoglobin no no 0 0 0 2 0 1 63.437 63.446 2 0.0068953 20166 20230619_1881_Aki_TMTPro18x_K_F2 117.02 35.061 182110 159260 179160 161080 206840 229000 206890 201970 269110 91817 76057 51733 73301 54852 116660 103950 88450 61858 168440 145810 182550 163540 212770 225830 210370 205210 262400 97853 86935 54700 76999 59082 116230 101360 84717 59297 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 315880000 6215 209;173 5891 11718 9455 9455 1 9606 Homo sapiens 0.07812160908224541 EGLLATHPR Unmodified 992.54033 0.54032847 2130 A8K940;Q66K74-2;Q66K74 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 0 5.5 0.5 1 1 35.543 35.615 3 6.4445E-05 7848 20230619_1886_Aki_TMTPro18x_K_F6 126.31 105.41 75198 54928 77226 80969 93870 107370 79395 90342 99171 82456 99455 102280 106010 82616 90984 73468 103760 91981 69502 50516 78547 79932 95857 106130 81552 93226 99884 84390 102320 102220 107220 85435 93379 75087 99075 87211 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22684000 6216 2130 5892 11719;11720 9456;9457 9457 2 9606 Homo sapiens 0.04375992020334252 EGLLCQQQR Unmodified 1130.5502 0.55024123 2708 B7ZKS3;Q86UV5;Q86UV5-8;B7ZKR8;Q86UV5-2;A0A0A0MRS6;Q86UV5-5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes no 0 0 0 5 0 1 39.459 39.549 2 1.4135E-06 9327 20230619_1885_Aki_TMTPro18x_K_F5 137.9 94.135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6217 2708 5893 11721 9458 9458 1 9606 Homo sapiens -0.009811880365987236 EGLLFEGR Unmodified 919.47633 0.47633123 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J432;A0A994J428;B3KRA9;A0A994J4Q4;A0A994J6R6;A0A994J4P6 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 3.5 0.5 1 1 50.591 50.642 2 0.0177 14265 20230619_1883_Aki_TMTPro18x_K_F4 91.069 54.673 802170 597510 674570 800400 954140 1055000 961770 993350 1307200 962820 964880 984590 1142500 899290 951330 1091800 1051100 966650 740350 548870 700960 794660 970060 1045800 979370 1017900 1297800 976180 1013800 995900 1151000 940760 976960 1086800 1004100 919770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 724910000 6218 43 5894 11722;11723 9459 9459 1 9606 Homo sapiens 0.013372118633810715 EGLLLLSRPDR Unmodified 1267.7248 0.72483478 2801 CON__Q3T052 yes yes 0 0 1 8 0 1 49.871 49.943 3 0.00033007 13519 20230619_1888_Aki_TMTPro18x_K_F8 107.51 64.268 + 17237 16687 17940 18748 30111 34289 24897 25514 39374 48064 60073 80222 61308 50322 58868 57444 60971 73656 15962 15287 18358 18963 30208 33296 25856 27268 40143 48320 60846 78870 62390 53273 60015 58525 58404 69741 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27156000 6219 2801 5895 11724 9460 9460 1 0.10168135380217791 EGLLLWCQR Unmodified 1173.5965 0.59646314 387;1069 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;G3V2N5;A0A804HJQ9;G3V2W4;B4DRP5;A0A494C1A0;P35609;P35609-2;A0A804HI95;A0A804HJN7;B7Z2N5;Q08043;B2R8Y4;G3V2X9;A0A087WSZ2;B4DZQ2;B7Z4V1;A0A804HKG0;A0A494C033;A0A494C166;F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;B4E337;B4DSX0 ACTN1;ACTN2;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 no no 0 0 0 2 0 1 58.537 58.55 2 7.3293E-07 18026 20230619_1881_Aki_TMTPro18x_K_F2 163.77 72.733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6220 387;1069 5896 11725 9461 9461 1 9606 Homo sapiens 0.016608768654577943 EGLMLDSHEELYK Unmodified 1562.7287 0.72865911 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2.5 0.5 1 1 52.019 52.084 3 4.9999E-08 15081 20230619_1882_Aki_TMTPro18x_K_F3 157.52 145.35 139530 103680 126180 129230 94376 136750 131980 145080 142000 173380 168420 177160 188150 169110 176120 187560 182500 202860 128840 95173 128870 128540 101840 137810 131310 148340 145290 173750 172500 179370 190870 175680 179730 189020 174690 192440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96080000 6221 3881 5897 11726;11727 9462;9463 9463 2 9606 Homo sapiens -0.03019607698888649 EGLPVALDK Unmodified 940.52295 0.52294707 4012 Q5RLJ0;Q549M8;Q9Y224 C14orf166 UPF0568 protein C14orf166 yes no 0 0 0 4.5 0.5 1 1 53.192 53.237 2 0.012717 15489 20230619_1883_Aki_TMTPro18x_K_F4 80.231 50.422 107470 92970 100780 108130 105530 133110 113820 114050 145290 145540 134920 130550 165640 124140 122330 163650 151570 147560 99360 85231 103070 108280 109650 132250 115250 118640 145900 144990 140180 133040 165930 130430 126990 162790 144710 140340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 518410000 6222 4012 5898 11728;11729 9464 9464 1 9606 Homo sapiens 0.05030651694664812 EGLQNMEAR Oxidation (M) 1062.4764 0.47640759 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;F5H783;F5GXD8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 1 0 1.5 0.5 1 1 31.012 31.045 2 0.013896 6099 20230619_1881_Aki_TMTPro18x_K_F2 72.478 56.816 146990 119830 130820 147300 166070 173670 147400 157510 222540 184330 194700 185260 183280 151490 182700 194010 210050 186730 135790 109940 134840 146820 169320 173280 152010 162700 221250 184970 200490 186920 187410 159640 187360 193850 200550 177520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 337720000 6223 2088 5899 11730;11731 9465;9466 9466 1312 2 9606 Homo sapiens -0.052331561989376496 EGLQNMEAR Unmodified 1046.4815 0.48149296 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;F5H783;F5GXD8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 2.5 0.5 1 1 38.429 38.487 2 0.00030789 8966 20230619_1882_Aki_TMTPro18x_K_F3 140.45 93.379 699860 523460 560960 621630 615040 686670 634230 596750 930950 773000 845280 857830 835290 712270 711590 918120 946460 868340 645730 480250 582540 620550 636090 687480 647350 620770 927650 774870 870670 862180 847260 750250 739850 915930 902760 825560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 782800000 6224 2088 5899 11732;11733 9467;9468 9468 2 9606 Homo sapiens -0.039888523363288186 EGLRPGDTTSTFCGTPNYIAPEILR Unmodified 2764.349 0.34902881 2308 B2RCZ4;B5BUK7;P41743 PRKCI Protein kinase C;Protein kinase C iota type yes no 0 0 1 8 0 1 58.118 58.164 3 0.00070158 17092 20230619_1888_Aki_TMTPro18x_K_F8 71.54 61.42 4438.2 4728.5 5837.5 4846.3 3835.9 4777.2 4874.5 6800.9 6688.8 7511.1 5504.2 7043.5 5724.4 5655 8015.4 8085.5 6624 7104.2 4122.4 4327.1 5777.6 4891.6 4174.2 4883.1 4918.6 6818.8 6672.2 7533 5728.3 7119.2 5949.8 6002.8 8034.3 8031.3 6354.5 6756.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19633000 6225 2308 5900 11734 9469 9469 1 9606 Homo sapiens 0.03742825924655335 EGLTGTGTGPSR Unmodified 1131.552 0.55201537 2000 A8K0R1;P25686;C9J1G2;E7ETU0;C9JX00;B4DF16;C9JRD2;C9JXB9;P25686-2 DNAJB2 DnaJ homolog subfamily B member 2 yes no 0 0 0 4 0 1 34.656 34.706 2 9.2173E-06 7429 20230619_1883_Aki_TMTPro18x_K_F4 143.5 125.18 14006 11099 13053 18305 22244 23876 19646 25229 35667 19185 21140 22727 20493 19214 19232 15921 24431 22945 12941 10219 13510 17950 22337 23737 20441 25496 34796 19852 22349 22779 20900 19763 19845 16459 23315 21725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11888000 6226 2000 5901 11735 9470 9470 1 9606 Homo sapiens -0.008498557469692969 EGLVPVSEDPVAIK Unmodified 1451.7872 0.78716026 1642 A0A7G6J4N4;Q14694;Q14694-3;Q14694-2;J3KT19 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 0 0 0 4 0 1 58.047 58.05 3 0.065565 17509 20230619_1883_Aki_TMTPro18x_K_F4 50.102 39.578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6227 1642 5902 11736 9471 9471 1 9606 Homo sapiens 0.07933816937907068 EGLVVRPQR Unmodified 1052.6091 0.60907674 4472 Q9BYN8 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 0 0 1 1 0 1 34.407 34.407 3 0.00031195 7743 20230619_1880_Aki_TMTPro18x_K_F1 122.44 94.037 68037 54478 62261 73451 89356 105280 82015 79318 104670 76661 86857 83669 91700 72889 74488 91554 96847 84365 62860 50033 64216 72980 90577 103410 83778 82749 104560 77917 90121 84305 92614 76535 77369 91255 92360 80253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85717000 6228 4472 5903 11737 9472 9472 1 9606 Homo sapiens 0.08487656320039605 EGLYQYK Unmodified 899.43888 0.43888309 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 6.5 0.5 1 1 46.949 47.035 2 0.031875 12192 20230619_1887_Aki_TMTPro18x_K_F7 94.407 47.841 279320 216830 220230 267660 296430 305270 292190 294340 448950 328350 315410 265340 310440 252200 274470 378140 363720 301730 257740 198980 230050 266570 302040 305650 299480 302290 442860 328430 329240 272120 315390 267240 285220 373370 346720 287630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 233080000 6229 3152 5904 11738;11739 9473;9474 9474 2 9606 Homo sapiens -0.014858794022416077 EGMEAAVEK Unmodified 962.4379 0.43789681 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 0 0 2 0 1 43.766 43.849 2 0.0024542 11613 20230619_1881_Aki_TMTPro18x_K_F2 116.3 66.887 65201 49589 56242 60852 70948 75913 66490 64693 104850 84463 86921 79449 88375 72101 67073 68842 102710 87952 60194 45507 58121 60717 72491 75375 68452 67383 103880 84223 89990 80602 89159 74504 70544 70304 97825 83389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40286000 6230 2350 5905 11740 9475 9475 1 9606 Homo sapiens -0.0448246183344736 EGMFNNANVLFK Oxidation (M) 1398.6602 0.66018561 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 1 0 8 0 1 56.288 56.345 3 2.8758E-05 16254 20230619_1888_Aki_TMTPro18x_K_F8 119.39 103.95 58409 45597 45676 58317 49752 52707 51647 54863 68921 66406 68792 63165 66010 56586 63549 72096 61588 76922 53896 41857 47588 57760 51453 53782 52508 56211 69229 66402 70423 64075 67338 59422 64612 72441 59052 72954 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57458000 6231 128 5906 11741 9476 9476 52 1 9606 Homo sapiens -0.023198074881065622 EGMNIVEAMER 2 Oxidation (M) 1309.5642 0.56423631 2036;3735 P62937;A8K486;V9HWF5;B2RE56;B4DM82;Q71V99;P62937-2 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase no no 0 2 0 1.5 0.5 1 1 37.524 37.554 3 0.0059623 8962 20230619_1880_Aki_TMTPro18x_K_F1 69.03 60.517 45991 30908 42403 48042 58479 52851 48239 53487 60297 45722 60931 48713 42319 42160 50970 42587 50082 43677 42452 28454 43629 47148 59132 53100 49620 54378 60698 46737 61595 49141 44230 43698 51581 42888 47882 41497 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 367300000 6232 2036;3735 5907 11742;11743 9477 9477 1274;1275 1 9606 Homo sapiens -0.07816323390488833 EGMNIVEAMER Oxidation (M) 1293.5693 0.56932169 2036;3735 P62937;A8K486;V9HWF5;B2RE56;B4DM82;Q71V99;P62937-2 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase no no 0 1 0 2 0.816 3 3 3 47.406 47.455 2;3 0.00091314 13582 20230619_1882_Aki_TMTPro18x_K_F3 99.343 82.769 821610 688420 749510 825290 818950 851570 844640 807750 1015100 954920 1004300 912960 971290 825470 948500 1064100 977030 1014600 759290 631380 768790 822590 845820 858420 855410 832340 1023900 956150 1028900 926290 991260 867010 967150 1062400 934800 964070 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 4857900000 6233 2036;3735 5907 11744;11745;11746;11747;11748;11749;11750;11751;11752 9478;9479;9480;9481;9482;9483;9484 9484 1274;1275 7 9606 Homo sapiens -0.06572019527880002 EGMNIVEAMER Unmodified 1277.5744 0.57440707 2036;3735 P62937;A8K486;V9HWF5;B2RE56;B4DM82;Q71V99;P62937-2 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase no no 0 0 0 3.2 1.72 1 1 1 1 1 55.852 55.869 2 2.2788E-07 16574 20230619_1883_Aki_TMTPro18x_K_F4 169.52 144.74 1509100 1335600 1456700 1376400 1034900 1500300 1424800 1425900 1726300 1791000 1604600 1618700 1878900 1521100 1715100 1938000 1757600 1866200 1395800 1223000 1477700 1389400 1122200 1505800 1423900 1471400 1737600 1785400 1664300 1647800 1900600 1594800 1750600 1936100 1682000 1772900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6249399999.999999 6234 2036;3735 5907 11753;11754;11755;11756;11757 9485;9486;9487;9488 9487 4 9606 Homo sapiens -0.05327715665271171 EGMSNNSTTSISQAR Unmodified 1581.7053 0.7052979 2199 B1APZ0;P50150 GNG4 Guanine nucleotide-binding protein subunit gamma;Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4 yes no 0 0 0 4 0 1 35.672 35.72 3 9.7586E-08 7825 20230619_1883_Aki_TMTPro18x_K_F4 130.72 114.58 14490 13957 17510 19669 21463 16289 18307 16384 21383 17248 21331 18565 18028 15123 17778 15776 17703 17120 13437 12817 17598 19344 21832 16749 18737 16772 21592 17432 21725 18676 18488 15750 18067 15928 16935 16248 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19945000 6235 2199 5908 11758 9489 9489 1 9606 Homo sapiens -0.062286534835038765 EGNASGVSLLEALDTILPPTRPTDK Unmodified 2593.3599 0.35991107 1378 Q05639;A0A2U3TZH3;Q59GP5 EEF1A2 Elongation factor 1-alpha 2 yes no 0 0 1 7.5 0.5 1 1 64.534 64.559 3 1.2728E-20 19905 20230619_1887_Aki_TMTPro18x_K_F7 168.25 154.66 30601 18574 23626 21859 4252.8 8855.1 16052 17091 19743 30727 31743 35505 41990 42603 23295 43012 38136 48486 28196 17056 24276 21659 6325.2 10131 15653 17271 20419 30456 32451 36067 41695 43711 24948 43463 36417 45956 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2544900000 6236 1378 5909 11759;11760 9490 9490 1 9606 Homo sapiens 0.1269655157057059 EGNDLYHEMIESGVINLK Unmodified 2059.9885 0.98845562 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079;F8W0P7;H0YI37 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 5 0 1 62.339 62.386 4 3.2056E-09 18969 20230619_1885_Aki_TMTPro18x_K_F5 124.29 100.72 250300 213860 256860 298330 248780 345650 312630 287270 400030 266100 250600 238840 273330 225110 278910 291370 271940 284580 231560 196440 260640 294780 261420 344310 314020 297050 396220 269600 265120 243380 278530 236230 283210 291320 260350 270320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199180000 6237 3391 5910 11761 9491 9491 1 9606 Homo sapiens 0.0008609312149019388 EGNEQLTEEER Unmodified 1332.5794 0.57935233 1638 A0A6Q8PGU6;Q8NB90-2;Q8NB90;Q8NB90-3 SPATA5 Spermatogenesis-associated protein 5 yes no 0 0 0 1 0 1 34.251 34.251 2 5.8911E-17 7706 20230619_1880_Aki_TMTPro18x_K_F1 234.9 207.8 30768 15110 32760 33871 40148 39678 34409 40963 47101 31457 41287 48185 45886 38395 35887 25067 50823 46184 28395 14011 33222 32710 40944 39683 35436 41492 46983 32829 42867 47776 46220 39248 37425 26628 48450 43659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45842000 6238 1638 5911 11762 9492 9492 1 9606 Homo sapiens -0.07363416997304739 EGNFDIVSGTR Unmodified 1193.5677 0.56766543 1110 A0A0S2Z4Y5;Q5QPK2;H0Y368;O60762;A0A804HJ93;A0A804HIK9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes no 0 0 0 3.5 0.5 1 1 46.684 46.744 2 0.00018864 12679 20230619_1882_Aki_TMTPro18x_K_F3 130.23 114.97 93923 75087 81713 99948 93912 100960 110430 98845 121860 114660 118440 109300 104010 100510 104500 117550 120360 115190 86742 68951 84328 98871 97030 101960 110690 101590 123330 114890 120990 110940 106740 104820 107210 117690 114970 109450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271070000 6239 1110 5912 11763;11764 9493 9493 1 9606 Homo sapiens -0.021375692299670845 EGNLELLK Unmodified 914.5073 0.50729701 3761 P82673;H0YG82;P82673-2 MRPS35 28S ribosomal protein S35, mitochondrial yes no 0 0 0 4 0 1 52.671 52.695 2 0.033479 15215 20230619_1883_Aki_TMTPro18x_K_F4 82.749 19.264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6240 3761 5913 11765 9494 9494 1 9606 Homo sapiens 0.04662365177625816 EGNPAEINVER Unmodified 1226.5891 0.58912916 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1 SRRT Serrate RNA effector molecule homolog yes no 0 0 0 1 0 1 39.53 39.53 2 0.0016418 9886 20230619_1880_Aki_TMTPro18x_K_F1 96.067 71.292 47799 31446 37814 55882 53407 68441 58072 51390 82265 67971 64075 94566 89381 79196 54372 107040 103320 120380 44068 29005 39608 54503 54508 67801 58966 54160 81713 68672 67865 94221 88850 83659 58902 107690 98505 114130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28338000 6241 4464 5914 11766 9495;9496 9495 2 9606 Homo sapiens -0.015101842012427369 EGNPAEINVERDEK Unmodified 1598.7536 0.7536283 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1 SRRT Serrate RNA effector molecule homolog yes no 0 0 1 2 0 1 40.432 40.505 3 1.7409E-08 10033 20230619_1881_Aki_TMTPro18x_K_F2 138.01 111.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6242 4464 5915 11767 9497 9497 1 9606 Homo sapiens -0.021798365719632784 EGNQEVPFDVPELWYEDEK Unmodified 2322.0328 0.032822856 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;B4DSR0;A0A804HJI0 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 3 0 1 63.806 63.837 3 1.0857999999999998E-19 20061 20230619_1882_Aki_TMTPro18x_K_F3 182.82 173.77 132930 103650 101900 124390 83841 96692 122560 109600 97101 158060 132260 175350 169340 134160 135670 173960 146510 167160 122640 95087 105970 123570 89578 100200 120570 112470 102080 157500 135970 175630 169970 141870 139370 173690 140210 158770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237820000 6243 1723 5916 11768 9498 9498 1 9606 Homo sapiens -0.07531224251306412 EGNQIPGFPDRK Unmodified 1356.6786 0.67861287 2762 C9JXM3;Q5HYI8 RABL3 Rab-like protein 3 yes no 0 0 1 7 0 1 44.669 44.755 3 0.00055975 11224 20230619_1887_Aki_TMTPro18x_K_F7 94.023 68.011 72307 47831 61272 64347 62792 81323 78081 76957 91553 75564 86136 88680 90303 76597 72913 90827 84211 91621 66696 43963 63226 63839 65648 80794 78243 78877 92221 76873 88810 89043 91210 80155 75175 91039 80515 86987 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55849000 6244 2762 5917 11769 9499 9499 1 9606 Homo sapiens 0.014540704781211389 EGNSPSFFNPEEAATVTSYLK Unmodified 2287.0645 0.064457335 1782 A0A8I5KZ07;Q5JR04;A0A8I5KXC3;Q9HCE1-2;Q9HCE1;B7Z700;B3KQ43 MOV10 Putative helicase MOV-10 yes no 0 0 0 7 0 1 63.527 63.56 3 2.7733E-09 19463 20230619_1887_Aki_TMTPro18x_K_F7 120.52 117.03 32916 26532 31004 39883 62459 57076 55273 52532 66422 49493 37725 58904 58292 46054 51960 57520 51984 61586 30419 24397 32179 39372 62114 56315 56425 53891 65913 50499 41114 58866 58531 48551 52981 57829 49804 58416 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74687000 6245 1782 5918 11770 9500 9500 1 9606 Homo sapiens -0.027592314973844623 EGNVLGHSR Unmodified 967.48354 0.48354187 2197 B1AMV7;Q6P4A7-3;Q6P4A7-2;Q6P4A7 SFXN4 Sideroflexin-4 yes no 0 0 0 4 0.816 1 1 1 28.982 29.064 3 0.0023975 5222 20230619_1883_Aki_TMTPro18x_K_F4 75.474 45.289 67212 46051 86643 88519 113360 99707 86338 102120 98217 79093 112800 114890 99251 90595 104670 57593 122670 123290 62235 42518 86768 85990 114670 100020 89071 103520 99887 82256 114490 114110 102030 92563 107060 62241 117200 116400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 26308000 6246 2197 5919 11771;11772;11773 9501;9502 9502 2 9606 Homo sapiens -0.0015005553618721024 EGNVPNIIIAGPPGTGK Unmodified 1632.8835 0.88352026 2664 Q75MT5;B5BUD2;P35250-2;P35250 RFC2 Replication factor C subunit 2 yes no 0 0 0 4.5 3.5 1 1 57.036 57.062 3 0.00024701 17300 20230619_1880_Aki_TMTPro18x_K_F1 81.854 63.021 148480 129710 135960 156080 144570 170830 154000 165080 181650 152380 148650 149780 168970 145200 181040 185160 159090 171750 137260 118950 139420 155640 149900 171470 155610 168680 182150 154660 155030 152110 172380 152020 182700 184670 152510 163220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 608310000 6247 2664 5920 11774;11775 9503;9504 9503 2 9606 Homo sapiens 0.09239384497846004 EGPAVVGQFIQDVK Unmodified 1485.7827 0.78274359 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 6.5 0.5 1 1 62.349 62.393 3 1.1024E-06 18852 20230619_1887_Aki_TMTPro18x_K_F7 123.1 100.56 330520 273280 305480 318610 283830 320530 323010 317480 342770 386940 381170 380050 409690 356990 363060 459530 408110 493910 305450 250580 312150 318160 297680 323970 324150 326450 349890 387060 390520 385470 415090 374490 373060 461720 390640 468440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1308800000 6248 2126 5921 11776;11777 9505;9506 9506 2 9606 Homo sapiens 0.059283525149794514 EGPDLDRPGSDR Unmodified 1312.6008 0.60075648 4171 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;A0A087WZ99 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 0 0 1 1.5 0.5 1 1 32.749 32.779 3 1.2122E-07 7086 20230619_1880_Aki_TMTPro18x_K_F1 166.7 139.28 177880 119030 146850 175200 177600 194620 180540 182350 237330 187800 231850 250920 228980 193240 190720 228530 246020 237400 164060 109510 152390 172470 182290 194980 183600 187320 238130 191510 238070 249890 232010 203060 197870 229480 234800 225420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 368240000 6249 4171 5922 11778;11779 9507;9508 9507 2 9606 Homo sapiens -0.04303987177922863 EGPDLDRPGSDRQER Unmodified 1725.803 0.80303811 4171 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;A0A087WZ99 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 0 0 2 1.5 0.5 1 1 29.731 29.765 4 5.6151E-11 5897 20230619_1880_Aki_TMTPro18x_K_F1 166.04 137.75 51371 0 0 56539 84260 57536 51783 61552 56258 55284 63824 52409 50210 47153 62678 60957 64951 60617 46812 0 0 52228 79840 58151 54155 62411 57396 56104 64478 53225 52301 49527 63632 61021 62092 57594 2 0 0 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 140620000 6250 4171 5923 11780;11781 9509;9510 9509 2 9606 Homo sapiens -0.03083128563162063 EGPEGNDIR Unmodified 985.44649 0.44648767 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;Q01433-5;Q01433-3;Q01433-4;H0YF16;A0A804H2H4;Q01432-4;Q01432-5;B7Z282;Q01432;Q01432-6 AMPD2;AMPD3 AMP deaminase 2;AMP deaminase 3 yes no 0 0 0 1 0 1 32.085 32.085 2 0.00056199 6821 20230619_1880_Aki_TMTPro18x_K_F1 131.41 103.88 25957 13543 36230 39834 46021 58499 39354 49357 46661 35956 56595 70867 53709 54023 56384 22020 64526 71088 24026 12624 36128 38243 46892 57442 40331 50675 47458 38127 57580 69679 55086 54604 57541 25507 61705 66975 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33288000 6251 1570 5924 11782 9511 9511 1 9606 Homo sapiens -0.046817718726060775 EGPEGNDIRR Unmodified 1141.5476 0.54759869 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;Q01433-5;Q01433-3;Q01433-4;H0YF16;A0A804H2H4 AMPD2 AMP deaminase 2 yes no 0 0 1 1.5 0.5 1 1 27.899 27.937 3 3.8974E-05 5236 20230619_1880_Aki_TMTPro18x_K_F1 128.03 82.898 22805 13630 21271 24050 31406 26353 29942 28648 29761 27253 29101 31843 28890 28617 30946 20919 38406 30760 21040 12577 21898 23446 31709 26530 30259 29074 30305 27757 29910 31976 29625 29214 31781 21736 36621 29139 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82155000 6252 1570 5925 11783;11784 9512;9513 9512 2 9606 Homo sapiens -0.01751320169887549 EGPGEAIVR Unmodified 926.48214 0.48214489 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 2.5 0.5 1 1 37.609 37.666 2 0.0011677 8722 20230619_1881_Aki_TMTPro18x_K_F2 118.32 79.906 99138 71065 81878 81724 54448 57032 91021 89472 105580 121300 146160 154770 138000 121750 128770 150000 158790 141380 91468 65191 84198 81411 59735 60329 90150 90050 108330 121820 147740 154470 140710 128100 132870 149750 151520 134440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181960000 6253 2005 5926 11785;11786 9514 9514 1 9606 Homo sapiens 0.015963103750550545 EGPIDLGACNQDDWISAVRPVIEK Unmodified 2681.3119 0.31191502 2291 Q5LJB0;B2RB07;Q9Y5K5-2;Q9Y5K5-4;Q9Y5K5-3;Q9Y5K5;Q5LJA5;Q5LJA9;H0Y6Y4;B4DW59;B7Z9U9;H0Y4E0 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes no 0 0 1 7 0 1 62.41 62.446 4 7.9585E-13 18924 20230619_1887_Aki_TMTPro18x_K_F7 122.73 116.94 113730 96045 100340 112330 106560 113260 127870 115000 116040 131410 130080 121670 141580 110840 141240 147230 130710 150040 105080 88063 103220 112140 110700 114540 127310 117850 119530 131600 133300 123660 144030 116680 143090 147500 125300 142400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106390000 6254 2291 5927 11787 9515;9516 9515 2 9606 Homo sapiens 0.03851154378889987 EGPIGGESDSEEVR Unmodified 1459.6427 0.64268087 2924 E9PJP2;Q5TF21;A0A994J4H7;A5PLQ8;A1L177;H3BRB8 SOGA3;C6orf174 Protein SOGA3 yes no 0 0 0 1 0 1 38.621 38.621 2 1.6288E-69 9479 20230619_1880_Aki_TMTPro18x_K_F1 342.74 314.97 54623 51598 57081 54992 40199 39972 41092 42861 43122 51980 77567 66460 50554 47462 86267 50685 56574 56142 50576 47251 57490 55103 43074 41675 41532 43871 45151 52445 76765 66193 54125 49728 85261 51311 54413 53268 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48864000 6255 2924 5928 11788 9517 9517 1 9606 Homo sapiens -0.06875476280060866 EGPLCDELIR Unmodified 1200.5809 0.58087266 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;K7EP67;K7EJ74 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 2 0 1 50.757 50.809 2 3.9173E-05 14779 20230619_1881_Aki_TMTPro18x_K_F2 150.53 122.02 295560 241660 269210 284990 261410 299060 294260 289310 333480 333970 330080 309130 350400 285280 313050 361140 352000 340460 273100 221620 275650 284480 273210 301140 296060 297440 337480 334390 339560 314260 355140 299140 321400 360410 336340 323630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 279950000 6256 2436 5929 11789 9518 9518 1 9606 Homo sapiens -0.011394544422273611 EGPLFIHR Unmodified 967.52395 0.52395013 2687 H0YB35;F8W6L0;E7ERK1;B7Z9G3;B7Z405;F5GXT2;Q2NL74;B7ZL55;O43374-2;O43374;C9J798;H0Y980 RASA4;RASA4B Ras GTPase-activating protein 4;Putative Ras GTPase-activating protein 4B yes no 0 0 0 7 0 1 41.739 41.81 3 0.00057532 9999 20230619_1887_Aki_TMTPro18x_K_F7 133.12 93.812 19634 13020 17419 19393 28489 39459 34119 28619 45819 19009 23063 24508 24156 18631 23463 26508 26252 24697 18117 11981 18081 19302 28952 38089 34376 29728 45007 19958 24792 24451 24589 19829 24041 26401 25080 23482 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25250000 6257 2687 5930 11790 9519 9519 1 9606 Homo sapiens 0.038889108542207396 EGPNHQLISYQGR Unmodified 1497.7324 0.73243935 2650 B4E2I9;Q99985;Q99985-2 SEMA3C Semaphorin-3C yes no 0 0 0 6 0 1 36.848 36.916 3 7.5775E-08 8294 20230619_1886_Aki_TMTPro18x_K_F6 151.08 121.59 28951 20220 29658 33713 62987 67182 37704 35005 41811 26630 35193 35929 34221 27232 35124 31982 51344 37982 26751 18628 30587 33312 62096 64635 39591 37758 42079 27701 36390 35771 35013 28639 36570 32409 48876 36061 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39181000 6258 2650 5931 11791 9520 9520 1 9606 Homo sapiens 0.0034824290985397965 EGPSGSGDSQLSASSR Unmodified 1520.6703 0.6702926 3821 Q6AWA4;Q12789;Q6AHZ7;Q12789-3 DKFZp686O0870;GTF3C1;DKFZp686A111 General transcription factor 3C polypeptide 1 yes no 0 0 0 2 0 1 33.365 33.423 2 9.2755E-64 7031 20230619_1881_Aki_TMTPro18x_K_F2 322.81 304.03 22655 8895.1 17808 23419 20391 27875 16969 23681 27133 24006 31138 32458 31025 25660 23396 22047 39001 35994 20843 8287.2 18567 22474 20963 27707 17646 24478 27210 24506 31746 32320 31313 26524 24774 22998 37144 34051 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26412000 6259 3821 5932 11792 9521 9521 1 9606 Homo sapiens -0.06921573019781135 EGPVQFEEDPFGLDK Unmodified 1705.7835 0.78353145 3859 Q6I9S2;Q13573;G3V4X8;B7Z9X2;B4DY36;A0A024R6E3;Q9ULA6 SNW1 SNW domain-containing protein 1 yes no 0 0 0 4 0 1 62.43 62.435 3 0.0080343 19354 20230619_1883_Aki_TMTPro18x_K_F4 60.209 42.703 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6260 3859 5933 11793 9522 9522 1 9606 Homo sapiens -0.04112897626623635 EGPYDVVVLPGGNLGAQNLSESAAVK Unmodified 2583.318 0.31804626 4402 V9HWC2;Q99497;K7EN27 HEL-S-67p;PARK7 Protein deglycase DJ-1 yes no 0 0 0 6.5 0.5 1 1 62.256 62.3 3 4.2168E-39 18833 20230619_1887_Aki_TMTPro18x_K_F7 213.2 200.27 377800 302210 360250 379380 316560 371430 388140 389650 383810 500100 469830 489220 514370 450130 464320 585980 527400 598260 349160 277340 366900 376740 334300 376590 387270 399770 395270 498910 480130 495860 521280 472800 477220 586960 504500 567840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4387100000 6261 4402 5934 11794;11795 9523;9524 9524 2 9606 Homo sapiens 0.08971995882075134 EGPYGLIICPSR Unmodified 1360.6809 0.68092105 2396 B3KRK2;Q53HI2;Q9UJV9;H0Y8L8;A0A499FJW5 DDX41 Probable ATP-dependent RNA helicase DDX41 yes no 0 0 0 8 0 1 55.283 55.345 2 0.000411 15891 20230619_1888_Aki_TMTPro18x_K_F8 128.01 101.5 44715 41330 45927 52376 40828 51964 44088 47362 57172 54224 50414 51848 52726 43462 53016 48581 45868 48406 41389 37913 46519 51969 42973 52456 44691 48890 57246 54368 52161 52430 53733 45390 53487 48750 43973 45969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24908000 6262 2396 5935 11796 9525 9525 1 9606 Homo sapiens 0.015007828915713617 EGPYSISVLYGDEEVPR Unmodified 1908.9105 0.91052288 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 0 0 2.5 1.12 1 1 1 1 60.395 60.409 2;3 6.404300000000001E-30 18756 20230619_1881_Aki_TMTPro18x_K_F2 220.61 184.72 69282 61950 68772 72618 67096 80070 68413 74870 84880 88061 75447 84196 101340 72773 93807 96039 85036 95159 64096 56791 69901 72568 69936 80281 69447 77177 85255 88168 79060 85234 102150 76745 95051 96080 81517 90355 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 161990000 6263 3484 5936 11797;11798;11799;11800 9526;9527;9528;9529 9527 4 9606 Homo sapiens -0.0075759647229460825 EGQCNFR Unmodified 909.3763 0.37629961 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 3 0 1 31.009 31.095 2 0.022415 6020 20230619_1882_Aki_TMTPro18x_K_F3 91.626 83.473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6264 2005 5937 11801 9530 9530 1 9606 Homo sapiens -0.08201348742068149 EGQEDQGLTK Unmodified 1103.5095 0.50948185 1159;1980 P26599;P26599-2;A0A0U1RRM4;P26599-1;A0A7I2V621;A0A0D9SF20;A0A087WUW5;O95758-6;O95758-2;O95758;O95758-5;A0A024R163;O95758-4;O95758-1;O95758-7;A6NLN1 PTBP1;PTBP3;ROD1 Polypyrimidine tract-binding protein 1;Polypyrimidine tract-binding protein 3 no no 0 0 0 1.5 0.5 1 1 38.79 38.79 2;3 2.6807E-05 9267 20230619_1881_Aki_TMTPro18x_K_F2 130.23 112.91 47009 22331 54942 63036 87119 98867 61899 85441 69405 48159 83476 103250 67098 73735 82761 29029 100550 99920 43415 20809 55682 60675 87279 96831 64181 87152 70738 52348 84433 101180 69866 74661 84553 34041 96028 94156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39380000 6265 1159;1980 5938 11802;11803 9531;9532 9532 2 9606 Homo sapiens -0.038132508752369176 EGQEEVLK Unmodified 930.46583 0.46582612 645 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 0 0 0 1.5 0.5 1 1 41.61 41.648 2 0.0049785 10579 20230619_1881_Aki_TMTPro18x_K_F2 126.24 57.456 62230 38773 71809 86275 90972 100430 77412 98568 101220 72601 107350 112550 97995 95312 99695 55670 111140 113550 57530 35902 72519 83301 92628 100340 79642 100090 101880 76015 109480 111790 100470 96799 101720 59979 106240 107220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56168000 6266 645 5939 11804;11805 9533 9533 1 9606 Homo sapiens -0.0021881558171799043 EGQEIASVSDDHTCR Unmodified 1702.7217 0.72167625 2519 B4DKV8;Q8NFH4 NUP37 Nucleoporin Nup37 yes no 0 0 0 1 0 1 35.412 35.412 3 7.812E-20 8145 20230619_1880_Aki_TMTPro18x_K_F1 165.89 147.48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6267 2519 5940 11806 9534 9534 1 9606 Homo sapiens -0.10157572317416452 EGQGNLPVR Unmodified 968.50394 0.50394297 3858 Q13564-3;Q13564-2;Q13564;Q13564-4 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes no 0 0 0 3.5 0.5 1 1 35.055 35.111 2 0.001228 7562 20230619_1883_Aki_TMTPro18x_K_F4 117.76 87.951 167370 107760 160410 178040 231290 232420 217290 214580 263960 194300 236490 239120 244500 210790 208820 171140 276990 259410 154500 99304 164690 174610 234150 230430 221260 219890 264940 198970 244260 239660 247680 216380 216490 177710 264240 245520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 234990000 6268 3858 5941 11807;11808 9535;9536 9536 2 9606 Homo sapiens 0.018431151236200094 EGQGSSAVGFEVPQQDVILPEY Unmodified 2348.1172 0.11722119 3951 Q16566;B2R747 CAMK4 Calcium/calmodulin-dependent protein kinase type IV yes no 0 0 0 3 0.816 1 1 1 64.482 64.498 3 2.5314E-05 20341 20230619_1882_Aki_TMTPro18x_K_F3 88.176 88.176 12081 8816.6 13127 13660 9438.3 11748 12607 10198 13785 14989 10865 12065 15130 11055 11100 12964 14594 13883 11171 8113.5 13197 13366 10188 11983 12564 10665 13879 14804 11478 12333 15107 11552 11560 13043 13925 13179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61607000 6269 3951 5942 11809;11810;11811 9537 9537 1 9606 Homo sapiens -0.0029127343464097066 EGQHYPER Unmodified 1014.4519 0.45190739 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959 SAFB Scaffold attachment factor B1 yes no 0 0 0 1.5 0.5 1 1 23.188 23.223 3 0.00060895 3821 20230619_1880_Aki_TMTPro18x_K_F1 119.62 102.1 81872 37706 105740 112590 163790 159880 120990 146620 139660 111130 168440 183160 127140 124890 141930 65941 166220 173900 75681 35189 106320 108000 164180 157650 125140 149680 142210 116390 169770 180500 131880 127680 144970 73513 158860 164000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168830000 6270 2020 5943 11812;11813 9538 9538 1 9606 Homo sapiens -0.054740482901365795 EGQKPPEGFMAPK Oxidation (M) 1430.6864 0.68640036 3250 O43252;Q4W5H3 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 1 1 6 0 1 42.679 42.773 3 0.03009 10705 20230619_1886_Aki_TMTPro18x_K_F6 60.55 46.644 38823 32026 35251 35020 47867 47689 39181 41221 48340 56658 56480 48021 55231 46368 51215 69360 56234 59824 35873 29349 36284 35298 48472 47141 40307 42942 49109 56168 57449 49144 56215 49099 52532 68738 53780 56909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39706000 6271 3250 5944 11814 9539 9539 1919 1 9606 Homo sapiens -0.011715383166119864 EGQKPPEGFMAPK Unmodified 1414.6915 0.69148574 3250 O43252;Q4W5H3 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 1 7 0 1 45.997 46.084 3 0.0014804 11795 20230619_1887_Aki_TMTPro18x_K_F7 84.173 63.51 77959 56996 73121 70719 85115 111520 88973 76966 103000 102510 104080 101470 127890 86642 102900 117660 129540 121870 72002 52319 74876 70803 87730 108830 89888 81698 104230 102240 107740 102580 128450 91622 106610 117920 123630 115740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53391000 6272 3250 5944 11815 9540 9540 1 9606 Homo sapiens 0.0007276554599684459 EGQRPTQPVYQIQNR Unmodified 1812.9231 0.92309367 102 M0R2N0;M0R0U0;M0QZC7;A0A024R0Q0;Q9H0W8-2;Q9H0W8 SMG9;FLJ12886 Protein SMG9 yes no 0 0 1 7.5 0.5 1 1 35.944 35.973 3 7.6724E-14 7852 20230619_1888_Aki_TMTPro18x_K_F8 175.29 145.36 44807 34242 45927 52875 51774 57582 54302 56666 65733 51723 58874 52113 53417 52780 53093 62296 61981 60036 41424 31504 46694 51898 53396 57821 54959 57817 65990 52584 60446 52967 54740 54890 54536 62299 59203 57053 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78523000 6273 102 5945 11816;11817 9541;9542 9542 2 9606 Homo sapiens 0.0491490450128822 EGQTICVR Unmodified 961.46511 0.46511462 3222 O14744;O14744-2;B2RDD7;O14744-5;O14744-3;O14744-4;B4DV00;H7BZ44;H0YJY6 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed;Protein arginine N-methyltransferase 5 yes no 0 0 0 3.5 0.5 1 1 35.301 35.353 2 0.005139 7704 20230619_1882_Aki_TMTPro18x_K_F3 129.65 100.31 154830 91693 146650 168820 207290 211210 177160 176060 209650 187330 244760 255820 238230 212380 207260 140380 288910 245320 142860 84663 150680 164520 209630 209470 181400 182620 213050 190860 249220 254890 241990 216780 215390 148360 275330 232060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 258730000 6274 3222 5946 11818;11819 9543;9544 9543 2 9606 Homo sapiens -0.017159335024075517 EGQTVSGMFR Unmodified 1110.5128 0.51279309 4070 Q5U5Z3;Q9UL42 PNMA2 Paraneoplastic antigen Ma2 yes no 0 0 0 6 0 1 44.599 44.688 2 7.5476E-05 11570 20230619_1886_Aki_TMTPro18x_K_F6 144.28 131.49 108370 77113 94402 97132 78450 87111 85815 86271 114580 106300 96668 101330 126310 98242 93916 104050 125090 108050 100020 70804 96816 96331 83042 88842 87024 88757 114430 106250 101320 102940 126410 101810 97830 104680 119260 102650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43872000 6275 4070 5947 11820 9545 9545 1 9606 Homo sapiens -0.038042793021986654 EGQVLECSLINSIR Unmodified 1616.8192 0.81920545 1685 Q15147-4;A0A8J8Z831;A0A7P0MRI8;A0A8I5KQI1;A0A8I5KS50;A0A8I5KXD7;A0A8I5KRP3;A0A8I5QL35;A0A8I5KRK2;A0A8I5KR92;A0A8I5KX82;A0A8I5KPD4;A0A8I5QJ53;Q15147-5;Q15147;A0A8I5KXW3;A0A8I5KYY7;A0A8I5QJE7;A0A8I5KQ87;A0A8I5KWR8;A0A8I5KQZ0;B1AJW3;A0A8I5KQF5;A0A8I5KVM8 PLCB4 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 yes no 0 0 0 6 0 1 60.678 60.736 3 0.00056103 18444 20230619_1886_Aki_TMTPro18x_K_F6 88.421 73.155 30363 24130 30920 27735 26148 28946 31069 30845 36546 27371 25181 23078 26178 22986 31649 25468 23636 22905 28075 22126 31271 27749 27674 29227 31214 31286 36445 27735 26417 23628 26947 23843 31610 25435 22687 21785 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6598400 6276 1685 5948 11821 9546 9546 1 9606 Homo sapiens 0.035468613494003876 EGREESEAEAPR Unmodified 1358.6062 0.60623578 2830 D3DVC4;P48681;Q2YDX4;Q9H6U9 NES Nestin yes no 0 0 1 1 0 1 26.509 26.509 3 0.0083138 4610 20230619_1880_Aki_TMTPro18x_K_F1 81.431 68.805 2032.8 0 1781.3 1891.1 4467.3 2645.3 3255.4 3135 3672.6 2776.8 3724 1490.4 4970.2 3788.1 3629.9 1992.5 3537.3 3106.1 1866 0 1869.2 1760.5 4377.6 2630.2 3362.9 3156.9 3718.9 2790.8 3856.7 1657 4964.8 3743 3699.8 2099.7 3382.4 2940 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44273000 6277 2830 5949 11822 9547 9547 1 9606 Homo sapiens -0.05872308386096847 EGRLELQQLQAER Unmodified 1568.8271 0.82706802 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 1 4 0 1 43.063 43.107 3 6.5675E-06 10873 20230619_1883_Aki_TMTPro18x_K_F4 119.17 87.016 66366 70563 66102 61837 77090 71894 92380 90637 101610 95335 85290 65893 99792 67381 77205 101950 86109 77290 61480 64495 67315 63404 79499 72457 92506 91372 102360 95199 88761 68387 100210 71359 79531 100440 82241 73704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114690000 6278 2830 5950 11823 9548 9548 1 9606 Homo sapiens 0.06540756661183877 EGRPPEPTPAK Unmodified 1177.6091 0.60913632 1230 Q9UQ35;A0A140VK53;O60382;Q9UQ35-2 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 0 1 4.5 0.5 1 1 34.013 34.082 3 0.014032 7149 20230619_1883_Aki_TMTPro18x_K_F4 67.519 59.006 178160 123880 186220 206500 253060 263260 230700 241780 284570 241000 278950 302660 302120 259580 267610 212250 335550 313240 164650 114130 189610 202340 256890 261310 235560 248420 286550 245570 287620 302770 306040 266800 276140 219920 320240 296530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217010000 6279 1230 5951 11824;11825 9549 9549 1 9606 Homo sapiens 0.027436115293767216 EGRPSGEAFVELESEDEVK Unmodified 2105.9753 0.97530798 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;D6RBM0;D6RIU0;D6RIT2;D6R9T0;D6RIH9;D6RFM3;D6RJ04;D6RAM1;D6RDU3;E7EN40;E7EQJ0;D6RDL0 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 0 1 2.29 1.03 2 2 2 1 51.325 51.362 3;4 6.0272E-31 14871 20230619_1880_Aki_TMTPro18x_K_F1 192.18 151.66 941460 811170 891490 958710 820140 936170 962200 954480 1008400 1192900 1173000 1122400 1283200 1070900 1158000 1372800 1220100 1289300 870440 743770 909120 955980 861600 948940 963760 980290 1032200 1190300 1200300 1141400 1299900 1122400 1184400 1369400 1167300 1225200 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 4724500000 6280 1427 5952 11826;11827;11828;11829;11830;11831;11832 9550;9551;9552;9553;9554;9555 9550 6 9606 Homo sapiens -0.03344066456929795 EGRPSGEAFVELESEEEVK Unmodified 2119.991 0.99095804 1404 A0A384MDT2;P55795;B4DFK9;B4DP00 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes no 0 0 1 2 0 1 51.905 51.944 3 7.4902000000000005E-25 15281 20230619_1881_Aki_TMTPro18x_K_F2 171.68 130.26 179900 134140 173060 182320 191440 223640 214570 219240 206610 191520 201580 225240 224470 185840 212960 227750 195400 221640 166200 123240 176740 180680 198050 222810 214780 223510 210740 196040 208280 225790 227750 195190 215880 227820 187310 210490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115400000 6281 1404 5953 11833 9556 9556 1 9606 Homo sapiens -0.024237799398633797 EGSALSHVR Unmodified 954.48829 0.4882929 3164 K7ELG9;Q3MHD2;Q3MHD2-2;B4DUG4 LSM12 Protein LSM12 homolog yes no 0 0 0 4.5 1.12 1 1 1 1 30.408 30.475 3 2.4083E-09 5738 20230619_1883_Aki_TMTPro18x_K_F4 192.32 178.87 110360 92708 105830 113450 116080 120820 115880 126070 151990 102380 114980 114840 107920 106900 97249 99477 137220 107690 102030 85042 108070 112980 119770 121750 117980 127790 151150 105210 119380 115750 110030 110080 101280 100570 130700 102310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132120000 6282 3164 5954 11834;11835;11836;11837 9557;9558 9557 2 9606 Homo sapiens 0.009228286065649627 EGSASTEVLR Unmodified 1047.5197 0.51965261 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 2 0 1 36.41 36.468 2 2.4998E-09 8245 20230619_1881_Aki_TMTPro18x_K_F2 197.81 161.41 158520 111520 138520 165190 178560 199200 183670 184240 255220 176890 221880 209450 207590 184360 190160 174080 240160 208500 146300 102580 143160 162750 182630 198430 187030 189060 254290 180340 228470 210320 211610 190450 196330 177110 229080 197790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 258010000 6283 3312 5955 11838 9559 9559 1 9606 Homo sapiens -0.0022064315000989154 EGSGNPTPLINPLAGR Unmodified 1591.8318 0.83181904 666 F8VQF4;F8VRS8;F8W145;F8VUB4;F8VV52;B3KTL6;B2RDX7;A0A024RBD8;Q9NZN8-2;Q9NZN8-4;Q9NZN8 CNOT2 CCR4-NOT transcription complex subunit 2 yes no 0 0 0 7.5 0.5 1 1 53.362 53.432 3 0.013245 15045 20230619_1888_Aki_TMTPro18x_K_F8 41.386 26.696 39255 35305 39689 43398 38722 43737 47261 54978 90169 49832 48715 53389 51017 43629 52690 55111 51592 54861 36323 32379 40295 43182 40618 44453 48453 55224 87638 50820 52057 53703 52097 45930 53503 55178 49396 52098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123910000 6284 666 5956 11839;11840 9560 9560 1 9606 Homo sapiens 0.059576408039447415 EGSGPIAFAHK Unmodified 1112.5615 0.56145784 4690 Q9UNI6 DUSP12 Dual specificity protein phosphatase 12 yes yes 0 0 0 7 0 1 43.385 43.464 3 0.00020359 10689 20230619_1887_Aki_TMTPro18x_K_F7 110.93 74.407 94898 82444 86518 94573 101350 108780 102500 97313 138500 93820 86739 88029 79227 71234 94746 93058 99534 92114 87719 75571 88854 94706 104180 108680 104330 100130 136880 94930 91141 89056 81902 75178 96323 93120 95136 87527 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70176000 6285 4690 5957 11841 9561 9561 1 9606 Homo sapiens 0.009679573291805355 EGSHSPLDSADVR Unmodified 1368.627 0.62697123 933 A0A0A0MRC4;Q86YR5;A0A0A0MSK4;Q86YR5-4 GPSM1 G-protein-signaling modulator 1 yes no 0 0 0 2 0 1 34.903 34.96 3 2.4423E-06 7675 20230619_1881_Aki_TMTPro18x_K_F2 136.3 110.64 22582 20146 23287 19937 21851 22154 23780 24398 30694 26925 30866 31701 31970 28199 26881 32975 34662 30305 20898 18441 23552 20207 22855 22304 24087 24833 30870 27228 31707 31853 32367 29442 27885 32897 33059 28828 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60223000 6286 933 5958 11842 9562 9562 1 9606 Homo sapiens -0.042597180064376516 EGSIWNHQPCFLK Unmodified 1614.7613 0.76129664 1479 A8K7T4;A0A384NPY7;Q12907;B4DWN1;A0A8Q3WK65;D6RBV2;D6RIU4;D6RDX1;D6RBH1 LMAN2 Vesicular integral-membrane protein VIP36 yes no 0 0 0 1.5 0.5 1 1 53.372 53.386 3 0.00042375 15713 20230619_1880_Aki_TMTPro18x_K_F1 93.011 65.149 94732 85297 95069 105910 87329 111300 98097 108410 109840 112860 101050 105380 101300 84273 104750 106490 111510 120050 87653 78236 96510 105330 91734 112030 98704 111040 110940 113570 104160 106570 103550 88848 106840 107400 106680 113850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 164990000 6287 1479 5959 11843;11844 9563;9564 9563 2 9606 Homo sapiens -0.021493557853773382 EGSLLSK Unmodified 732.40177 0.4017693 296 A0A024R4H5;Q53HN4;O00273-2;O00273 DFFA DNA fragmentation factor subunit alpha yes no 0 0 0 5.5 0.5 1 1 45.729 45.81 2 0.017368 12041 20230619_1886_Aki_TMTPro18x_K_F6 108.7 21.413 190980 120920 188650 185870 197250 219880 212430 191730 256130 198830 225280 244130 234740 180070 204220 165970 260570 255290 176320 111340 191950 182740 204680 219030 214610 198100 257040 202050 233110 243400 237750 187320 211070 172140 248730 241550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116460000 6288 296 5960 11845;11846 9565 9565 1 9606 Homo sapiens 0.0248644905201445 EGSLVINSK Unmodified 945.51311 0.51311067 4746 Q9Y5B9;Q0VGA3 SUPT16H FACT complex subunit SPT16 yes no 0 0 0 6.5 0.5 1 1 45.814 45.901 2 8.6765E-05 12076 20230619_1886_Aki_TMTPro18x_K_F6 175.91 115.23 302920 204170 254640 279380 350340 360790 325440 317710 420260 344530 376800 385880 393490 340910 336410 371780 464190 397560 279420 187670 264250 276920 355740 357670 332390 328240 420880 348230 389360 388310 398560 354770 350290 374480 442430 377570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295240000 6289 4746 5961 11847;11848 9566 9566 1 9606 Homo sapiens 0.03817463689279066 EGSPANWK Unmodified 887.41373 0.41373097 3368 Q6FI97;Q53FS0;O96019;O96019-2;D3DNS0 BAF53A;ACTL6A Actin-like protein 6A yes no 0 0 0 5.5 0.5 1 1 43.622 43.709 2 0.0076725 11087 20230619_1885_Aki_TMTPro18x_K_F5 121.31 87.224 359990 267110 323040 339140 424970 530720 402180 421380 584360 455040 511010 500080 530600 442820 429190 423590 599840 522670 332400 245230 332950 338970 433670 519380 412350 438710 581690 459860 528340 503560 536220 457850 447530 431600 571740 495670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 269840000 6290 3368 5962 11849;11850 9567;9568;9569 9567 3 9606 Homo sapiens -0.034479342048143735 EGSQGELTPANSQSR Unmodified 1559.7176 0.71757715 2750 Q13098-7;Q13098;Q13098-5;C9JFE4;A8K070;A0A096LPJ3;A0A096LP07;J3QQX0 GPS1 COP9 signalosome complex subunit 1 yes no 0 0 0 2 0 1 33.573 33.631 2 8.5794E-14 7108 20230619_1881_Aki_TMTPro18x_K_F2 186.16 164.79 17023 9921.9 23573 23221 26466 31237 26433 25537 37205 29130 30209 32892 39001 30579 26931 21870 38534 31240 15762 9198.9 23447 22434 27277 30816 26979 26577 37001 29391 31710 33104 38945 31186 28202 22666 36706 29600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50795000 6291 2750 5963 11851 9570 9570 1 9606 Homo sapiens -0.03989293748804812 EGSRTDDEVVQR Unmodified 1389.6484 0.64843495 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0TAY2;Q59FC6;A0A7P0TBC2;Q96GW1;A0A7P0T885;A0A7P0T8R3;A0A7P0Z405;B4DQX3;A0A7P0TAG4;A0A7P0Z4B4;A0A7P0T8C8;A0A7P0TAC2 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 1 1 0 1 28.729 28.729 3 1.2378E-05 5498 20230619_1880_Aki_TMTPro18x_K_F1 136.27 99.983 10903 5473.3 12081 14757 16471 16021 13587 15954 18292 14456 16507 16655 16501 14147 15844 9943.8 19224 20344 10066 5093.2 12253 14135 16672 16089 14017 16258 18288 14762 17021 16710 16814 14471 16276 10661 18369 19209 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13010000 6292 3452 5964 11852 9571 9571 1 9606 Homo sapiens -0.030803329777199906 EGSTAQLIINTEK Unmodified 1402.7304 0.73037367 1129 O00203;O00203-3;A0A0S2Z5J4;A8K586;A0A8Q3WKJ9;A0A8Q3WL34;A0A8Q3WKK0;A0A8Q3SHS6 AP3B1 AP-3 complex subunit beta-1;AP-3 complex subunit beta yes no 0 0 0 5 0 1 51.842 51.915 3 1.8345E-09 14574 20230619_1885_Aki_TMTPro18x_K_F5 157.22 129.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6293 1129 5965 11853 9572 9572 1 9606 Homo sapiens 0.045117693814063387 EGSTQQLQTTSPK Unmodified 1403.6892 0.68923713 876 A0A087X0H9;Q5T8P6-5;Q5T8P6-4;Q5T8P6-3;Q5T8P6-2;Q5T8P6 RBM26 RNA-binding protein 26 yes no 0 0 0 5 0 1 38.892 38.983 3 0.00068057 9127 20230619_1885_Aki_TMTPro18x_K_F5 89.613 75.707 16919 13110 23379 19513 22580 28878 24541 25708 31417 23968 31392 29799 24406 24975 26947 21380 34760 33384 15689 12056 23184 19302 23593 28396 24852 26425 31571 24510 31895 29820 25288 25729 27755 22233 33173 31586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29008000 6294 876 5966 11854 9573 9573 1 9606 Homo sapiens 0.003540083418783979 EGSVLDILK Unmodified 972.54916 0.54916182 68 A0A024QZW7;P49790;P49790-3 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 6 0 1 61.215 61.27 3 0.035017 18690 20230619_1886_Aki_TMTPro18x_K_F6 55.064 25.254 22223 19777 20244 21657 21402 22777 20300 24982 30639 23787 22504 22026 25213 20909 22649 25905 24991 26247 20545 18119 20751 21743 22128 23006 20861 25321 30293 24063 23584 22412 25527 21876 23224 25961 23897 24922 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11565000 6295 68 5967 11855 9574 9574 1 9606 Homo sapiens 0.0617892086613665 EGSVTSVNLTK Unmodified 1133.5928 0.59281755 1264 A0A1B0GU86;V9HWA0;B4DNW0;C9JMV9;Q03154-2;Q03154-4;Q03154;A0A1B0GW23;A0A1B0GV31;B4DPC3 HEL-S-5;ABHD14A-ACY1;ACY1 Aminoacylase-1 yes no 0 0 0 6.5 0.5 1 1 46.599 46.685 2 2.5854E-12 12051 20230619_1887_Aki_TMTPro18x_K_F7 212.28 161.22 58372 39785 48645 57665 58157 56745 58339 64812 71792 75926 80195 78389 75029 62282 66848 87965 80475 81064 53844 36593 50411 56738 59645 57639 59247 65931 72734 76183 81632 78948 76350 66129 68992 87531 76870 77066 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53482000 6296 1264 5968 11856;11857 9575;9576 9576 2 9606 Homo sapiens 0.031364855725996676 EGTDSSQGIPQLVSNISACQVIAEAVR Unmodified 2828.3974 0.39743557 4005 Q53HV2;Q99832;F8WBP8 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 7 0 1 63.876 63.906 3 8.8848E-73 19582 20230619_1887_Aki_TMTPro18x_K_F7 267.71 252.01 49889 44237 47888 48484 38690 48551 47015 47773 44515 53478 49138 51529 62137 47278 39861 67970 57385 58493 46140 40529 48682 48640 41175 49076 46878 49016 45738 53659 50762 52279 61923 50017 42049 67352 54743 55653 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1593199999.9999998 6297 4005 5969 11858 9577 9577 1 9606 Homo sapiens 0.056372747739260376 EGTEAWEAAMK Unmodified 1221.5336 0.53358811 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3 0 1 53.091 53.15 3 9.6582E-05 15548 20230619_1882_Aki_TMTPro18x_K_F3 95.483 79.592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6298 3881 5970 11859 9578 9578 1 9606 Homo sapiens -0.06831733713238464 EGTETFADHR Unmodified 1161.5051 0.50506518 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 2 0.816 1 1 1 32.028 32.074 3 3.9752E-11 6793 20230619_1880_Aki_TMTPro18x_K_F1 217.45 192.21 57329 39136 57932 64174 83755 81332 60751 72753 92951 69769 87331 95495 84686 76267 78389 66465 99968 93671 52961 36052 59200 62927 84314 80733 63611 74807 92580 71499 89788 95066 86266 78791 80938 68521 95397 88704 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 229110000 6299 1292 5971 11860;11861;11862 9579;9580 9579 2 9606 Homo sapiens -0.06922715298151161 EGTGTEMPMIGDR 2 Oxidation (M) 1424.5912 0.59117935 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 2 0 1 0 1 36.156 36.156 2 0.016682 8459 20230619_1880_Aki_TMTPro18x_K_F1 68.893 53.231 8533.2 9308.3 9482.9 11826 12231 8196.3 10096 11791 8736.9 11417 15216 12397 10574 8830.3 14587 11639 10860 12390 7914.1 8534.6 9601.7 11689 12380 8661.4 10274 11788 9240 11572 15092 12432 11120 9376.1 14542 11702 10437 11754 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26138000 6300 3789 5972 11863 9581 9581 2471;2472 1 9606 Homo sapiens -0.10413259569963884 EGTGTEMPMIGDR Unmodified 1392.6014 0.6013501 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 2.5 0.5 1 1 47.125 47.202 2 2.3755E-27 13108 20230619_1881_Aki_TMTPro18x_K_F2 243.91 224.15 75704 75259 86388 73249 72778 67152 79841 74150 54212 104690 106800 93834 110010 86813 113310 95121 98836 95944 70177 68856 86560 74161 76650 68630 79397 76100 58981 103720 107200 95514 112230 90271 114260 95573 94685 91130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103830000 6301 3789 5972 11864;11865 9582 9582 1 9606 Homo sapiens -0.07924651844746222 EGTIGDMAILGITESFQVK Unmodified 2008.0187 0.018693117 3756 V9HW96;P78371;P78371-2;B7Z4R3;Q9H369 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 7 0 1 65.519 65.544 2 0.0035625 20314 20230619_1887_Aki_TMTPro18x_K_F7 91.62 79.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6302 3756 5973 11866 9583 9583 1 9606 Homo sapiens 0.05500451786588201 EGTLQHAFLR Unmodified 1170.6146 0.61455605 2281 B2RA56;Q969V3-2;Q969V3;K7EQ66;K7ELZ9;K7ENM2;A0A0C4DGP7;K7EMW4 NCLN Nicalin yes no 0 0 0 8 0 1 43.434 43.445 3 4.2002E-07 10840 20230619_1888_Aki_TMTPro18x_K_F8 172.56 110.15 53061 47367 55567 59460 67058 70401 68274 65001 78549 72442 78128 76812 76905 69837 71152 74214 73627 76321 49111 43452 56436 59193 68747 70245 69075 66982 79413 72968 80116 77540 78280 72482 72608 74629 70441 72458 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97705000 6303 2281 5974 11867 9584 9584 1 9606 Homo sapiens 0.036073351118375285 EGTSNSTSEDGPGDGFTILSSK Unmodified 2184.9659 0.9658655 55 Q9P0M6;A0A024QZP6;A0A7I2V423;Q9HA11;A0A7I2YQD6;A0A7I2YQR8;A0A7I2V6E9;A0A7I2V2N7;Q5SQT3;A0A7I2V5A9;A0A7I2V5G0 H2AFY2 Core histone macro-H2A.2;Core histone macro-H2A;Histone H2A yes no 0 0 0 2.5 0.5 1 1 56.354 56.381 3 1.7772E-10 17146 20230619_1881_Aki_TMTPro18x_K_F2 121.25 111.83 31918 29595 36291 41087 33540 46102 39029 46696 48025 45135 48978 47266 50506 44142 44996 52522 51290 58708 29571 27175 36503 40602 35275 46214 39340 47597 48443 45765 50257 47806 51248 46087 46244 52966 49064 55669 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129070000 6304 55 5975 11868;11869 9585;9586 9585 2 9606 Homo sapiens -0.07921879533159881 EGVDESFIK Unmodified 1022.492 0.49204087 2332 B2RWN5;Q5T3Q7;Q9H583 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 3 0 1 50.657 50.728 3 0.00015479 14447 20230619_1882_Aki_TMTPro18x_K_F3 99.802 69.232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6305 2332 5976 11870 9587 9587 1 9606 Homo sapiens -0.018305464102240876 EGVECEVINMR Unmodified 1334.5959 0.59587079 1402 A0A384MDR8;P11177-3;P11177-2;P11177;C9J634 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes no 0 0 0 2 0 1 48.771 48.836 2 2.3488E-10 13898 20230619_1881_Aki_TMTPro18x_K_F2 194.06 187.68 56949 48039 57657 61025 58706 72065 69353 69491 83362 67782 72883 67040 79785 64500 70995 85535 81091 83342 52674 44082 58564 60704 61250 71949 69735 71115 83664 68610 75531 68077 80785 67748 72986 85447 77505 79173 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65254000 6306 1402 5977 11871 9588 9588 1 9606 Homo sapiens -0.0580433063653345 EGVEHQLR Unmodified 966.48829 0.4882929 2303 J3QR41;J3KTD6;J3QLN8;J3KT86;B2RC06;Q96GD4-3;Q96GD4-4;Q96GD4;Q96GD4-5 AURKB Aurora kinase B yes no 0 0 0 2 0 1 29.322 29.394 3 4.0626E-05 5479 20230619_1881_Aki_TMTPro18x_K_F2 160.88 75.031 25606 20136 21519 25038 26475 24612 20481 25546 30453 26502 29266 26762 30787 24125 24609 18044 29593 20594 23640 18479 22283 24877 26943 24956 21324 26048 30410 26747 30121 27052 31066 24666 25365 18404 28204 19567 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23683000 6307 2303 5978 11872 9589 9589 1 9606 Homo sapiens 0.003708286065716493 EGVGPVEQEGVRR Unmodified 1410.7215 0.72154031 4318 Q96H44;Q969Y2-3;Q969Y2;Q969Y2-4;Q969Y2-2 GTPBP3 tRNA modification GTPase GTPBP3, mitochondrial yes no 0 0 1 2 0 1 33.873 33.929 3 0.00081555 7241 20230619_1881_Aki_TMTPro18x_K_F2 86.467 63.039 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6308 4318 5979 11873 9590 9590 1 9606 Homo sapiens 0.0326084053554041 EGVHGGGLNK Unmodified 966.48829 0.4882929 2741 C9J712;P35080;C9J2N0 PFN2 Profilin-2;Profilin yes no 0 0 0 5 0.816 1 1 1 33.506 33.566 3 4.291E-06 7077 20230619_1886_Aki_TMTPro18x_K_F6 151.22 103.64 48422 24136 71796 78211 80182 74107 58020 67369 61817 42043 81670 91489 61723 68033 69818 25012 89601 87482 44844 22559 71116 74363 81852 75021 59999 68661 63433 45363 82066 89743 64121 68665 71686 29480 85524 82437 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 240090000 6309 2741 5980 11874;11875;11876 9591 9591 1 9606 Homo sapiens 0.0037082860658301797 EGVHGGLINK Unmodified 1022.5509 0.55089316 3400 P07737;K7EJ44 PFN1 Profilin-1 yes no 0 0 0 7 0.816 1 1 1 39.147 39.192 3 4.2276E-10 8882 20230619_1887_Aki_TMTPro18x_K_F7 170.68 135.24 674020 435650 567830 622140 660280 730280 655330 655680 911110 903590 928850 1011500 1095900 937410 740120 1266700 1154700 1154400 621610 400730 587350 614130 679150 728410 668930 681590 914770 903470 959490 1019800 1096800 986530 784670 1259700 1100800 1097600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4429900000 6310 3400 5981 11877;11878;11879 9592;9593 9593 2 9606 Homo sapiens 0.0405197467475773 EGVHGGLINKK Unmodified 1150.6459 0.64585618 3400 P07737;K7EJ44 PFN1 Profilin-1 yes no 0 0 1 3.67 3.09 1 1 1 37.887 37.911 3;4 0.00026108 8668 20230619_1888_Aki_TMTPro18x_K_F8 112.15 78.281 227020 190700 193430 214080 247580 230290 239620 232750 280340 283450 298400 266250 292920 228700 275730 293730 301880 242990 209700 174790 200170 214550 252450 231880 243300 238950 284080 283210 304850 269910 298180 240610 282200 291280 288180 231550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 205370000 6311 3400 5982 11880;11881;11882 9594;9595;9596 9596 3 9606 Homo sapiens 0.07655908145943613 EGVHGGTLNK Unmodified 1010.5145 0.51450765 2552 C9J0J7;G5E9Q6;B4DNH1;D3DNI2;P35080-2;D3DNI3 PFN2 Profilin;Profilin-2 yes no 0 0 0 5.5 0.5 1 1 33.918 33.984 3 5.5051E-06 7256 20230619_1886_Aki_TMTPro18x_K_F6 153.1 74.838 114940 49178 137200 144700 219280 225340 129860 175550 172350 116900 206860 284940 168980 204650 197430 89141 256650 280270 106140 45902 138740 139080 218780 220410 137620 181140 174310 126460 209530 278470 175470 207520 202910 102510 245150 264090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 146440000 6312 2552 5983 11883;11884 9597;9598 9598 2 9606 Homo sapiens 0.00967097778061543 EGVHGGTLNKK Unmodified 1138.6095 0.60947067 2552 C9J0J7;G5E9Q6;B4DNH1;D3DNI2;P35080-2;D3DNI3 PFN2 Profilin;Profilin-2 yes no 0 0 1 8 0 1 33.766 33.762 4 1.6374E-06 6993 20230619_1888_Aki_TMTPro18x_K_F8 136.53 107.8 150200 75361 224110 192170 387180 311040 227490 271940 200450 121810 223330 211860 133340 156150 316180 47417 166170 148020 139110 70046 223580 185840 383760 304620 238030 276320 206400 133930 224420 209020 147720 157040 308510 55960 160310 139590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104980000 6313 2552 5984 11885 9599 9599 1 9606 Homo sapiens 0.045710312492246885 EGVIEAGAFQGGQR Unmodified 1417.695 0.69499121 3640 P53367-2 ARFIP1 Arfaptin-1 yes yes 0 0 0 4 0 1 46.559 46.602 2 2.3162E-11 12453 20230619_1883_Aki_TMTPro18x_K_F4 183.03 155.51 36944 35810 41951 39436 30869 39851 31462 30020 42235 43114 46408 45554 44237 37471 41809 49007 51965 51314 34239 32800 42013 39547 33011 40047 32056 31719 42588 42957 47312 45866 45110 39533 43157 49167 49617 48716 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37421000 6314 3640 5985 11886 9600 9600 1 9606 Homo sapiens 0.002851516442206048 EGVILTNESAASTGQPDNDVTEGQR Unmodified 2587.1998 0.19978162 3813 Q08J23-2;Q08J23;Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 0 0 0 1 0 1 47.901 47.901 3 0.004388 13444 20230619_1880_Aki_TMTPro18x_K_F1 62.1 53.281 7944.9 5271.1 8212.8 11174 8632.6 7582.7 7883.1 9830.3 10148 11377 10873 10526 12919 9841.2 11026 13186 14913 11846 7339.8 4875.2 8340.7 10740 8900.9 7988 8070.5 9928.4 10251 11384 11208 10706 13027 10355 11470 13116 14210 11277 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49203000 6315 3813 5986 11887 9601 9601 1 9606 Homo sapiens -0.030330281644182833 EGVKFDESEK Unmodified 1166.5455 0.54553301 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;B4DU71;B4DHT9 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 1 4 0.816 1 1 1 42.632 42.696 3 0.00047203 10655 20230619_1885_Aki_TMTPro18x_K_F5 110.39 79.314 59701 50982 62334 58862 77741 71808 80281 75884 87071 67973 86149 69728 64054 47140 83146 50174 62957 46921 55239 46737 63306 59002 79473 71766 80990 77024 88178 69181 87389 69966 66899 49556 82910 50312 60321 44659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1132600000 6316 3452 5987 11888;11889;11890 9602 9602 1 9606 Homo sapiens -0.031077936984047483 EGVKTENNDHINLK Unmodified 1609.806 0.80599822 536 A0A024R8S3;P61956-2;P61956 SUMO2 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2 yes no 0 0 1 4.5 1.12 1 1 1 1 39.852 39.922 4 6.1424E-07 9516 20230619_1883_Aki_TMTPro18x_K_F4 140.74 118.08 490300 659870 781320 556180 1139300 567150 880510 645130 276690 508190 663030 129380 139180 60689 1058800 51296 54665 40696 457420 602590 772680 571650 1140200 577050 884360 650470 332220 508440 637520 147520 200560 65032 999590 54371 61914 38817 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 404400000 6317 536 5988 11891;11892;11893;11894 9603;9604;9605 9603 3 9606 Homo sapiens 0.02548746561660664 EGVLTGSPEQK Unmodified 1143.5772 0.57716749 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 4 0 1 43.903 43.947 2 0.004706 11268 20230619_1883_Aki_TMTPro18x_K_F4 107.45 76.083 36661 27334 32273 33332 30455 32052 30575 28977 42180 45944 44846 57424 59012 49671 29845 62605 68322 64751 33847 25085 33119 33156 31802 32452 31190 30288 42463 45875 46546 57481 58431 52174 33162 62721 64974 61491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18545000 6318 2863 5989 11895 9606 9606 1 9606 Homo sapiens 0.011121990555693628 EGVMVAK Oxidation (M) 748.37893 0.37892537 3921;3594;1322 Q15149;A0A1W2PQS6;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A2R8Y6L3;P46783;Q59GE4;Q9NQ39 PLEC;RPS10;RPS10P5 Plectin;40S ribosomal protein S10;Putative 40S ribosomal protein S10-like no no 0 1 0 4.8 0.748 2 2 1 39.418 39.489 2 0.042492 9225 20230619_1885_Aki_TMTPro18x_K_F5 83.614 40.548 308420 157460 322310 359250 460880 432260 388780 454360 439870 325140 452880 450460 405410 358460 432310 220130 487630 449090 284620 146030 328470 346800 465210 431820 397930 459000 445260 339380 462030 448240 416640 365710 440950 236980 465760 424260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 515920000 6319 3921;1322;3594 5990 11896;11897;11898;11899;11900 9607;9608 9607 827 2 9606 Homo sapiens -0.005328933371174571 EGVMVAK Unmodified 732.38401 0.38401075 3921;3594;1322 Q15149;A0A1W2PQS6;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A2R8Y6L3;P46783;Q59GE4;Q9NQ39 PLEC;RPS10;RPS10P5 Plectin;40S ribosomal protein S10;Putative 40S ribosomal protein S10-like no no 0 0 0 5 0.816 1 1 1 43.24 43.313 2 0.030812 10902 20230619_1886_Aki_TMTPro18x_K_F6 94.887 34.736 343070 195910 400480 402080 437890 532210 429890 461760 528370 387620 516580 544690 490450 433830 471240 253480 601930 521500 317070 181230 402680 390420 452040 526120 437110 474550 531590 400740 529600 541550 500670 441880 485440 273410 574100 492780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 489870000 6320 3921;1322;3594 5990 11901;11902;11903 9609 9609 1 9606 Homo sapiens 0.0071141052549137385 EGVQGPLNVSLSEEGK Unmodified 1641.821 0.82097959 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 3.5 0.5 1 1 53.964 54.017 3 0.00043305 15785 20230619_1883_Aki_TMTPro18x_K_F4 84.213 66.707 86487 66917 73700 80154 76431 100920 85464 97617 111100 103860 114990 109380 121010 104900 122100 117150 121750 120860 79847 61390 76032 80138 79623 100350 86474 100060 111860 104820 118040 110690 123370 109000 124090 117760 116490 114760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129650000 6321 3440 5991 11904;11905 9610;9611 9611 2 9606 Homo sapiens 0.025741936389977127 EGVTAMHK Unmodified 871.42219 0.42218717 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q5T9A4;Q5T9A4-3;A0A5K1VW56;Q9H834;Q5SV16;Q8N3E6;Q5T2N8 ATAD3A;ATAD3B;DKFZp761L1023;ATAD3C ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3C yes no 0 0 0 5.5 0.5 1 1 36.094 36.17 3 0.0017892 8016 20230619_1886_Aki_TMTPro18x_K_F6 110.87 65.242 36328 20955 46255 51280 52393 62141 56338 62168 66799 44065 62917 57874 62262 49896 62762 31491 62557 57300 33605 19446 46298 49374 54057 61931 56909 63009 67196 45957 64681 57848 63559 50808 63619 33497 59820 54170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51277000 6322 4603 5992 11906;11907 9612 9612 1 9606 Homo sapiens -0.01866703559835514 EGVVECSFVK Unmodified 1152.5485 0.5485099 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 5.25 0.829 1 1 2 50.594 50.656 2;3 1.2328E-06 14196 20230619_1886_Aki_TMTPro18x_K_F6 150.08 107.48 362080 291320 299350 341190 344580 360470 364390 356690 442930 410350 433040 381090 435280 393090 412660 471500 413630 444640 334290 267160 310220 340760 354980 363090 368640 366110 446340 411110 444520 388940 443240 409140 420420 470910 395960 422490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2221000000 6323 297 5993 11908;11909;11910;11911 9613;9614;9615 9615 3 9606 Homo sapiens -0.021662418452251586 EGWEYVK Unmodified 909.42323 0.42323303 1164 A0A140TA86;Q5XKP0 QIL1 Protein QIL1 yes no 0 0 0 4 0 1 50.635 50.666 2 0.076788 14308 20230619_1883_Aki_TMTPro18x_K_F4 74.127 27.562 210570 178870 180340 196390 216550 233090 242980 240620 285190 259600 254990 224450 237800 198120 221160 259330 294430 259260 194520 163910 186370 197450 222840 233160 244680 245730 286900 260310 262070 228680 242530 208540 229430 259490 280760 246380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183880000 6324 1164 5994 11912 9616 9616 1 9606 Homo sapiens -0.03510165919283281 EGWPSSAYGVTK Unmodified 1280.6037 0.60371659 1468 A0A384NL53;P16152 CBR1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 7.33 0.471 2 1 51.9 51.976 2;3 2.5571E-07 14498 20230619_1887_Aki_TMTPro18x_K_F7 162.26 124.78 570430 446740 533810 541230 548010 591580 611290 600080 635650 612880 572860 535640 655950 525320 597190 671840 666560 607640 527040 409870 545570 539620 569690 594660 613470 612750 643920 616400 594180 547250 663910 550130 612500 669000 636680 578040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 351400000 6325 1468 5995 11913;11914;11915 9617;9618;9619;9620 9618 4 9606 Homo sapiens -0.02536112053121542 EGYAWAEDK Unmodified 1067.456 0.45598972 4728 Q9Y3I0;B4DNA0 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 2.5 0.5 1 1 49.011 49.082 2 0.00065684 13727 20230619_1882_Aki_TMTPro18x_K_F3 143.7 93 266180 239090 262280 271370 296660 320390 314990 303670 398490 356450 349260 334220 401550 319910 332450 369090 379330 369820 246250 219110 267340 272120 305980 319960 319030 312770 399290 356900 362780 339860 404780 333210 342050 370070 362430 351280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 313230000 6326 4728 5996 11916;11917 9621;9622 9622 2 9606 Homo sapiens -0.07504003587109764 EGYGGFR Unmodified 784.3504 0.35040244 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9;Q8NI92 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 yes no 0 0 0 5 0 1 38.075 38.168 2 0.04529 8778 20230619_1885_Aki_TMTPro18x_K_F5 88.35 59.838 178860 136960 160510 179280 175790 178800 185620 188690 249900 226020 221590 259260 254820 199920 195160 260480 268350 244460 165180 125770 164910 177560 181680 181100 188560 193100 249830 227450 230310 259560 256160 211400 203890 259700 255880 232440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192780000 6327 1748 5997 11918 9623 9623 1 9606 Homo sapiens -0.050398749220448735 EGYNNPPISGENLIGLSR Unmodified 1928.9592 0.9592044 4749 Q9Y5Q8-2;Q9Y5Q8;Q9Y5Q8-3;Q5T7U1;Q5T7U4;B7Z1V3;Q5T7U0 GTF3C5 General transcription factor 3C polypeptide 5 yes no 0 0 0 6.5 0.5 1 1 56.703 56.768 3 0.00011001 16784 20230619_1886_Aki_TMTPro18x_K_F6 87.228 57.873 146030 120240 130310 146340 123020 127700 130940 132210 142030 152610 155460 149860 170260 137740 150480 171270 161810 161140 134920 110300 133640 145410 128550 130700 131980 135350 144690 153030 159480 151900 172310 144280 154110 170950 154700 153160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49310000 6328 4749 5998 11919;11920 9624 9624 1 9606 Homo sapiens 0.03188316887485598 EGYSGVGLLSR Unmodified 1136.5826 0.58258722 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1;G3V3C7;A0A0C4DGK8;H7C4A8;G3V5M0;G3V359 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 0 7 0.816 1 1 1 48.728 48.806 2 5.4782E-12 12995 20230619_1887_Aki_TMTPro18x_K_F7 205.18 137.16 900860 780220 805480 866050 800890 916020 924820 889280 986910 1032600 1034000 966530 1083000 887420 1015100 1173000 1089200 1123000 832570 714970 826530 868500 836010 922100 927310 914260 1004200 1033800 1060500 982050 1100400 933310 1038400 1170800 1041700 1067000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2108199999.9999998 6329 3515 5999 11921;11922;11923 9625;9626;9627 9626 3 9606 Homo sapiens 0.01975922638052907 EGYTIYK Unmodified 872.42798 0.42798405 1549 A0A494C0R8;K7EIG1;O75153;I3L2B0 CLUH Clustered mitochondria protein homolog yes no 0 0 0 6.5 0.5 1 1 46.745 46.83 2 0.013637 12525 20230619_1886_Aki_TMTPro18x_K_F6 113.7 65.879 60190 48757 53035 59619 54336 65521 62836 54248 76039 89595 80664 77214 88681 69095 62304 94488 91190 81152 55598 44731 54539 59381 56643 65549 63254 57162 76990 88277 82832 78672 88983 72906 65587 93701 86901 77257 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45709000 6330 1549 6000 11924;11925 9628 9628 1 9606 Homo sapiens -0.013332817765217442 EGYVLTAVEGTIGDFK Unmodified 1697.8512 0.85121708 1037;1668 A0A0G2JN29;Q15155;A0A0G2JP90;A0A7I2V4T6;A0A7I2V6B0;J3KN36;Q5JPE7-2;P69849;Q5JPE7;A0A7I2V3P4;A0A7I2V2Z5;Q5JPE7-3;Q1LZN2 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 2;Nodal modulator 3 no no 0 0 0 6.5 0.5 1 1 64.604 64.641 3 2.8925E-11 20187 20230619_1886_Aki_TMTPro18x_K_F6 158.89 131.69 37729 25534 26736 40222 26369 41108 40768 40776 50352 36678 40481 45655 42566 35862 49082 46128 42908 49644 34765 23510 28173 39384 27939 41437 40542 41583 50298 37581 42145 45611 43683 37858 49440 46395 41160 47090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94724000 6331 1037;1668 6001 11926;11927 9629 9629 1 9606 Homo sapiens 0.03020552304155899 EGYVPQEEVPVYENK Unmodified 1778.8363 0.8362953 4418 Q9BRP8-2;Q9BRP8 WIBG Partner of Y14 and mago yes no 0 0 0 2.5 0.5 1 1 52.683 52.729 3 1.6832E-05 15356 20230619_1882_Aki_TMTPro18x_K_F3 107.74 98.804 78893 69256 83848 97902 96557 115700 96570 95127 104550 122200 95636 104600 124190 89156 103600 118330 110870 120710 73021 63617 85053 96684 99345 115130 97618 99319 105890 121500 99855 106400 124750 94127 106190 118530 106080 114590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238830000 6332 4418 6002 11928;11929 9630 9630 1 9606 Homo sapiens -0.021969395637825073 EHAALEPR Unmodified 921.46683 0.46682918 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;B4DEC3;Q71UF1;B4DW08;O75944 ACO2;ACON Aconitate hydratase, mitochondrial yes no 0 0 0 1.5 0.5 1 1 28.044 28.082 3 0.0018431 5300 20230619_1880_Aki_TMTPro18x_K_F1 99.136 64.036 38166 21948 34939 45675 56845 46614 42963 54354 55671 38303 54577 57319 48398 49254 43113 35612 57418 52159 35201 20308 36131 44141 56841 47237 44536 54545 55885 40162 55783 57035 49406 50324 44676 36970 54762 49385 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 191330000 6333 1050 6003 11930;11931 9631;9632 9631 2 9606 Homo sapiens 0.002954435778519837 EHACVVAGLR Unmodified 1110.5604 0.56041199 943 J3QKK8;A0A0A0MRV4;J3KPF5;A0A2P0CTB1;J3KPF6;A0A0G2JRR6;A0A0G2JSF1;A0A0A0MT35;A0A2P0CU24;J3KRV9;A0A2P0CTH9;Q8TBF2-2;Q8TBF2;Q8TBF2-7;Q8TBF2-3;Q8TBF2-4;Q8TBF2-6 FAM213B Prostamide/prostaglandin F synthase yes no 0 0 0 6.5 0.5 1 1 34.88 34.945 3 4.0708E-05 7611 20230619_1886_Aki_TMTPro18x_K_F6 140.75 109.68 28214 14531 26304 27212 35306 32308 35415 32241 37790 31720 38485 36845 34304 30487 36987 29126 42291 36793 26014 13431 27016 26488 35911 32277 35762 32935 38364 32249 39268 36952 35284 31590 37809 29749 40374 34885 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19655000 6334 943 6004 11932;11933 9633 9633 1 9606 Homo sapiens 0.00955419688625625 EHALAQAELLK Unmodified 1221.6717 0.67173657 2015 A8K2G0;O15126;O15126-2;A0A087WZA6;B4E2V7;A0A087WXB0;A0A087WTX8 SCAMP1 Secretory carrier-associated membrane protein 1 yes no 0 0 0 5.5 0.5 1 1 47.054 47.133 3 7.3185E-05 12543 20230619_1885_Aki_TMTPro18x_K_F5 124.12 94.651 108450 58779 102420 107820 119460 108260 110350 117970 149770 130160 139040 145740 133940 112990 111860 153130 136570 158690 100030 54296 104790 104800 122390 109650 113030 120160 149880 131370 142930 146150 135830 119760 115750 153410 130590 150580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239130000 6335 2015 6005 11934;11935 9634 9634 1 9606 Homo sapiens 0.06976757597567484 EHALLAYTLGVK Unmodified 1313.7343 0.73433683 1560;3997;1378 Q05639;A0A2U3TZH3;Q59GP5;A0A2R8Y488;A0A2R8Y660;P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;A0A4D5RA98;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;Q9H2I7;A0A4D5RA52;A0A087WV01;Q53HR1;Q9NZS6;Q16577;A0A4D5RA61;A0A4D5RBK4;A0A4D5RAF1;A0A4D5RBI9;A9X7H1;Q53GE9 EEF1A2;EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha 2;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 2.25 0.722 1 8 2 1 66.958 66.991 3 8.1392E-18 16527 20230619_1880_Aki_TMTPro18x_K_F1 181.31 137.01 287480 134850 240180 272320 230910 238940 272110 268540 306250 336020 314420 302870 346870 268650 282340 351210 301380 308500 264750 124840 247950 263060 241440 244660 273070 274140 310610 334880 323500 307630 349730 282710 289680 349030 288220 293390 8 7 8 8 7 8 8 8 8 8 8 7 8 8 8 8 8 7 55581000000 6336 1378;1560;3997 6006 11936;11937;11938;11939;11940;11941;11942;11943;11944;11945;11946;11947 9635;9636;9637;9638;9639;9640;9641;9642;9643;9644 9635 10 9606 Homo sapiens 0.09001903665716782 EHALTSGTIK Unmodified 1055.5611 0.56112349 479 E5RHG8;A0A024R7Y5;Q15369;Q15369-2;R4GMY8;A0A8I5KYG1;A0A8J9AD82 TCEB1 Transcription elongation factor B polypeptide 1 yes no 0 0 0 6.5 0.5 1 1 38.005 38.075 3 0.021498 8509 20230619_1887_Aki_TMTPro18x_K_F7 61.213 42.115 30905 26468 33867 36147 70251 39154 51196 41043 43216 30835 36590 31476 37196 27762 42924 36012 38194 30117 28608 24305 34675 35745 69233 39505 52434 41557 44208 31746 37875 31842 38186 29204 43244 35753 36533 28697 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35604000 6337 479 6007 11948;11949 9645 9645 1 9606 Homo sapiens 0.035565376093245504 EHAMLAK Oxidation (M) 814.40072 0.40072345 3455;2572 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6;B4DQM6;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B no no 0 1 0 5 0 1 32.41 32.492 3 0.012567 6556 20230619_1885_Aki_TMTPro18x_K_F5 82.671 59.148 70144 22041 60604 68256 107220 79059 88355 87619 94797 73281 92815 78325 84467 77148 85179 45752 94419 83322 64537 20651 63062 65186 106880 79323 90347 88524 96066 75015 94871 79234 86539 78002 86882 48728 90173 78782 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96643000 6338 3455;2572 6008 11950 9646 9646 1561 1 9606 Homo sapiens -0.013900885885504977 EHAMLAK Unmodified 798.40581 0.40580882 3455;2572 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6;B4DQM6;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B no no 0 0 0 6 0 1 36.223 36.283 3 0.0045592 8066 20230619_1886_Aki_TMTPro18x_K_F6 105.95 78.422 117930 39993 106740 115140 144460 131480 128760 128700 177450 142630 161440 159230 166900 121950 126120 109160 180240 139840 108560 37379 109940 110160 146530 131570 132200 132040 177290 143970 166540 159520 168140 126480 131830 111700 171650 132640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82765000 6339 3455;2572 6008 11951 9647 9647 1 9606 Homo sapiens -0.00145784725930298 EHAPSIIFMDEIDSIGSSR Unmodified 2102.9943 0.99426928 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8;Q59GS3;J3QSA9;J3QQM1 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 3.5 0.5 1 1 61.656 61.672 3 3.9539000000000005E-25 19024 20230619_1883_Aki_TMTPro18x_K_F4 212.69 202.78 24274 14947 23224 24735 22158 26458 25578 23769 34097 27120 27250 28740 29583 25690 26295 29008 24484 29040 22403 13778 23675 24182 23224 26543 25848 24568 33962 27299 28390 28993 29964 26773 26713 29094 23475 27566 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103830000 6340 1202 6009 11952;11953 9648 9648 1 9606 Homo sapiens -0.01310808366861238 EHCEEYGR Unmodified 1078.4138 0.41380733 4728 Q9Y3I0;B4DNA0 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 1 0 1 23.166 23.166 3 0.04265 3823 20230619_1880_Aki_TMTPro18x_K_F1 58.23 50.951 38839 23727 46675 48831 73149 65748 54520 62277 62050 49340 63796 74199 53186 52756 58294 33899 80291 63945 35917 21943 47153 47426 73252 65107 56307 63491 62820 51314 64990 73381 54936 54122 60253 36141 76496 60477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99736000 6341 4728 6010 11954 9649 9649 1 9606 Homo sapiens -0.12226302267117717 EHCLVGVK Unmodified 940.48004 0.4800364 4184 Q86U44;B3KSH0 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes no 0 0 0 6.5 0.5 1 1 38.328 38.401 3 0.0047529 8884 20230619_1886_Aki_TMTPro18x_K_F6 91.853 63.11 54916 24123 46637 51015 57021 50351 58261 49697 73307 61481 69000 57688 60503 51087 54516 68695 75557 71629 50569 22363 48233 49253 58382 50942 59104 51161 73610 61423 70535 58568 61760 53862 56780 68864 72062 68016 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76343000 6342 4184 6011 11955;11956 9650 9650 1 9606 Homo sapiens 0.00741558365587025 EHCPAGQPVK Unmodified 1121.5288 0.52877751 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 4.5 0.5 1 1 31.241 31.312 3 0.00031955 6052 20230619_1883_Aki_TMTPro18x_K_F4 97.277 78.532 36968 11448 41430 37494 52964 59941 45885 55498 48644 32509 46526 44571 46672 47448 44619 26130 52351 47520 34084 10742 41866 35972 53909 58731 46793 56341 49256 34484 47835 44799 47588 47715 45725 27871 49981 44926 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 50083000 6343 1863 6012 11957;11958 9651;9652 9651 2 9606 Homo sapiens -0.027125730653324354 EHDPVGQMVNNPK Oxidation (M) 1479.6776 0.67762659 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DS32 CSE1L Exportin-2 yes no 0 1 0 3.5 0.5 1 1 35.197 35.249 3 2.6079E-06 7612 20230619_1883_Aki_TMTPro18x_K_F4 132.5 129.06 94319 32301 87160 101170 123930 98385 106390 109660 129620 120080 151190 137620 144800 135010 104580 134430 151600 153030 86843 30248 89722 96338 125090 99923 109020 111530 131560 121350 153660 138890 146180 139290 109810 136060 144610 145150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 208280000 6344 1462 6013 11959;11960 9653;9654 9654 964 2 9606 Homo sapiens -0.043025119530739175 EHDPVGQMVNNPK Unmodified 1463.6827 0.68271197 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DS32 CSE1L Exportin-2 yes no 0 0 0 4.5 0.5 1 1 40.628 40.693 3 1.979E-11 9839 20230619_1883_Aki_TMTPro18x_K_F4 151.55 135.66 385380 132280 357670 362080 391790 379040 398790 390240 481450 531250 511230 496080 546560 440990 396290 570150 525420 545340 354840 123480 366100 346610 404190 381980 404290 401630 487390 528190 524340 503370 549480 463670 413720 568950 501610 518150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 729650000 6345 1462 6013 11961;11962 9655;9656;9657 9655 3 9606 Homo sapiens -0.030582080904423492 EHDQLIEK Unmodified 1010.5033 0.50327426 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;A0A7I2YQX3;C9JKM9 XPO1 Exportin-1 yes no 0 0 0 2.5 0.5 1 1 38.3 38.358 3 0.001041 9040 20230619_1881_Aki_TMTPro18x_K_F2 118.67 68.063 261350 82736 198030 229250 268700 204610 269290 269740 368280 305510 343820 389860 388620 353950 232510 363540 420740 423950 240260 77310 207590 218930 273120 210230 274430 272060 368440 309500 355920 390600 388140 366730 250280 368170 400760 402020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 528660000 6346 3228 6014 11963;11964 9658;9659 9658 2 9606 Homo sapiens -0.0015572431608461557 EHDYRDEHLDFIQSHLR Unmodified 2209.0301 0.030077935 419 A0A024R6Z0;O43237-2;O43237;B4E2E0;B4DHD8 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 1 4 0 1 42.159 42.202 5 3.8338E-09 10483 20230619_1883_Aki_TMTPro18x_K_F4 136.2 126.45 24233 17624 22095 24032 25558 21505 29909 27887 35818 28881 30574 27823 31326 25424 22749 36034 30203 30588 22376 16194 22683 23714 26346 22099 30071 28080 35923 29112 31617 28242 31541 26865 23770 35695 28828 29109 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64634000 6347 419 6015 11965 9660 9660 1 9606 Homo sapiens -0.02607590075012922 EHEADTANMSDK Oxidation (M) 1362.5358 0.53577296 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;A0A8V8TR41 NAA15;NARG1 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 1 0 1 0 1 28.844 28.844 3 0.0001886 5542 20230619_1880_Aki_TMTPro18x_K_F1 96.604 90.364 7588.4 3052.7 7916.1 7031 11652 11515 8646.4 10965 13752 9861.1 14641 17892 17217 14639 8244.7 9210 20520 16734 6997 2836 8062.3 6827.1 11725 11285 9055.6 11202 13742 10276 15098 17669 17074 14926 9220.3 9764 19489 15828 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14426000 6348 2297 6016 11966 9661 9661 1420 1 9606 Homo sapiens -0.13099349766116575 EHEDYCGAR Unmodified 1135.4353 0.43527105 681 A0A024RBK4;O14545;F8VNX8;F8VVF3;O14545-2 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes no 0 0 0 1 0 1 25.68 25.68 3 0.0043503 4414 20230619_1880_Aki_TMTPro18x_K_F1 75.378 64.855 2779.9 0 2791 2408.5 5271.1 2918.2 2351.5 2400.4 2295.6 2875.4 4188.3 5874.5 3562.4 5757.2 3064 1808.8 5564.5 4833.9 2554.6 0 2864 2236.1 5177.5 2903.1 2542 2502.4 2421.6 2971.9 4191.5 5811 3652 5723.3 3254.6 2057.2 5294.8 4561.9 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1603400 6349 681 6017 11967 9662 9662 1 9606 Homo sapiens -0.1270291723842547 EHEEAVSVDR Unmodified 1169.5313 0.53127993 1161 Q13126-2;Q13126-3;B4DUC8;A0A384ME80;Q13126;Q13126-4;A0A140CZL4;Q6FHT1;Q6FHP1 MTAP S-methyl-5'-thioadenosine phosphorylase yes no 0 0 0 1 0 1 29.114 29.114 3 8.3948E-15 5624 20230619_1880_Aki_TMTPro18x_K_F1 239.54 193.54 49082 7019.9 35326 47577 57891 36985 49305 62973 79472 52943 72572 84104 81926 71391 38164 46656 74352 91587 45045 6845.5 37408 44501 57996 38775 51144 62247 78881 55011 75186 83458 81273 72797 41620 49779 70909 86451 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292780000 6350 1161 6018 11968 9663 9663 1 9606 Homo sapiens -0.04670446126669958 EHELLEQQK Unmodified 1152.5775 0.57750184 3850 Q13435;E9PJ04;H0YCG1;E9PJT3 SF3B2 Splicing factor 3B subunit 2 yes no 0 0 0 2 0.816 1 1 1 38.25 38.289 3 0.00011598 9003 20230619_1881_Aki_TMTPro18x_K_F2 120.99 82.685 380830 111290 293930 375190 424720 297330 406280 426560 547730 410340 483110 505550 486800 420870 338690 480010 405030 474730 350060 104570 308070 355700 429400 309450 414930 426470 546950 418580 498750 506080 489750 439920 351490 480740 387370 450700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 737040000 6351 3850 6019 11969;11970;11971 9664;9665 9664 2 9606 Homo sapiens 0.007316187753986014 EHEVFQR Unmodified 943.45118 0.45117911 409 A0A024R6S1;O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes no 0 0 0 2.5 0.5 1 1 30.235 30.316 3 0.0002906 5820 20230619_1881_Aki_TMTPro18x_K_F2 173.85 130.85 148460 60311 123410 143580 175550 125770 160910 180760 226820 177390 197220 196510 208820 180210 147110 222400 178260 187200 136660 56061 128270 137820 177460 129810 165110 180710 226040 180080 204130 198180 209860 188570 152830 220640 170320 178150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 587680000 6352 409 6020 11972;11973 9666;9667 9666 2 9606 Homo sapiens -0.022808429391830032 EHEVTIFVR Unmodified 1128.5928 0.59275797 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;K7EIE7 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 4 0.816 1 1 1 42.133 42.196 3 9.8677E-05 10495 20230619_1883_Aki_TMTPro18x_K_F4 138.98 90.692 712660 190680 606380 653780 602000 408300 613180 670420 784480 772870 967940 829460 937350 777450 553710 821900 768410 959770 655390 179420 624620 618370 624450 437340 623380 669640 796510 777110 981430 838260 939200 806370 583230 832130 734460 909440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1270800000 6353 161 6021 11974;11975;11976 9668;9669 9669 2 9606 Homo sapiens 0.03360530363283942 EHFAQFGHVR Unmodified 1226.5945 0.59448931 816 A0A087WUN7;H0YJ40;G3V4X6;G3V2S9;Q9GZT3-2;Q9GZT3;H0YJW7;H0YJ07;H0YJU7 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes no 0 0 0 7.5 0.5 1 1 34.773 34.806 3 4.7145E-14 7394 20230619_1888_Aki_TMTPro18x_K_F8 194.06 162.46 69650 30967 58173 66839 73770 59964 65883 68182 81907 66529 71700 60903 67155 55338 69601 60110 61575 58979 64132 28715 60302 64401 75064 61342 67383 69048 82094 67175 73781 61923 68775 57534 70236 60306 58974 56040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102390000 6354 816 6022 11977;11978 9670;9671 9671 2 9606 Homo sapiens -0.00974415828113706 EHFGTVK Unmodified 816.413 0.41300269 2916 E9PGT1;Q15631;B3KRM8;H7C1D4;B7Z5D9;Q53GR3;Q15631-2 TSN Translin yes no 0 0 0 6 0.816 1 1 1 36.392 36.466 3 0.0058207 8109 20230619_1886_Aki_TMTPro18x_K_F6 104.37 26.042 132190 42219 110370 133190 150070 124170 130510 139940 184060 122610 169520 142790 154840 126920 149300 117090 161110 127790 121600 39568 114610 126720 152040 126530 134380 141420 183640 125560 173760 143600 158200 130950 152370 118560 153810 121390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 424250000 6355 2916 6023 11979;11980;11981 9672 9672 1 9606 Homo sapiens -0.0025472885386079724 EHFQDDVFNEK Unmodified 1406.6103 0.61025853 426 P43490;A0A024R718;A0A7P0T9I9;A0A7P0T895;A0A7P0T8L3;A0A7P0T973;A0A7P0TAS5;A0A7P0T931;A0A7P0T8D2;A0A0C4DFS8;A0A7P0TA73;A0A7P0TBB7;A0A7P0T941;A0A7P0Z466;A0A7P0Z4N0;A0A7P0T9F0;A0A7P0TB17;A0A7P0T8Z3;A0A7P0T8R4;A0A7P0TAI8 NAMPT;PBEF1 Nicotinamide phosphoribosyltransferase yes no 0 0 0 2.67 1.25 1 1 1 46.616 46.657 3 0.00026517 13021 20230619_1880_Aki_TMTPro18x_K_F1 105.65 80.796 259790 155060 215470 246780 292780 269840 261850 274680 366530 256790 266520 269600 249820 222090 254470 260150 257440 295700 239480 142880 223840 241850 297050 271240 268960 279770 363200 261070 277440 271500 255830 232690 258900 262790 246560 280340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166280000 6356 426 6024 11982;11983;11984 9673;9674 9673 2 9606 Homo sapiens -0.07678218892397126 EHGAFDAVK Unmodified 972.46649 0.46649483 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 39.205 39.253 3 3.5519E-05 9223 20230619_1883_Aki_TMTPro18x_K_F4 135.55 99.024 710170 259190 542360 586510 705820 609900 636020 621750 861930 730280 870670 839740 904960 726200 676400 989350 991170 869150 653120 240900 567350 565160 717850 615110 652230 637370 865250 735870 893780 844330 911690 766650 710890 982310 944460 827240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 993030000 6357 2973 6025 11985;11986 9675;9676 9676 2 9606 Homo sapiens -0.020839761420006653 EHGAVAVER Unmodified 966.48829 0.4882929 3993 Q53FE8;Q9UNZ2;Q9UNZ2-5;Q53FF5;F2Z2K0;Q9UNZ2-6;Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 yes no 0 0 0 1 0 1 26.58 26.58 3 0.0010287 4683 20230619_1880_Aki_TMTPro18x_K_F1 93.667 64.58 7100.4 3321.1 5834.9 6365.1 8610 7924.8 7797 7094.5 7108.1 7403.1 10610 7901 7264.7 8328.1 8567.8 4909 8186.8 7588.6 6538.3 3072.5 6075.8 6192.3 8689.4 7875.1 7887.7 7314.6 7414.9 7481.8 10559 8016 7593.2 8390.5 8647.8 5152.6 7832.6 7181.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7833400 6358 3993 6026 11987 9677 9677 1 9606 Homo sapiens 0.003708286065716493 EHGLIFMETSAK Oxidation (M) 1377.6599 0.65985126 473;4277 A0A024R7V6;P61019;P61019-2;H7C125;O75546;Q8WUD1;A0A3B3ITL1;Q5HYI5;B4DUD4;Q8WUD1-2;Q96K32 RAB2;RAB2A;RAB2B;DKFZp313C1541 Ras-related protein Rab-2A;Ras-related protein Rab-2B no no 0 1 0 5 0.816 1 1 1 44.889 44.959 3 8.504E-05 11610 20230619_1885_Aki_TMTPro18x_K_F5 109.72 97.361 169480 99726 160170 177280 200870 168050 194890 188740 211050 179080 238540 205830 218700 200290 212940 206050 223900 221800 156370 92035 164130 172440 204850 171130 197360 191190 215000 182360 242370 207750 223640 207040 217200 207910 214110 210510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 309630000 6359 473;4277 6027 11988;11989;11990 9678;9679 9679 291 2 9606 Homo sapiens -0.0138722720791975 EHGLIFMETSAK Unmodified 1361.6649 0.66493664 473;4277 A0A024R7V6;P61019;P61019-2;H7C125;O75546;Q8WUD1;A0A3B3ITL1;Q5HYI5;B4DUD4;Q8WUD1-2;Q96K32 RAB2;RAB2A;RAB2B;DKFZp313C1541 Ras-related protein Rab-2A;Ras-related protein Rab-2B no no 0 0 0 6 0.816 1 1 1 49.918 49.996 3 8.7407E-06 13881 20230619_1886_Aki_TMTPro18x_K_F6 136.7 95.297 328000 210550 292360 330530 296930 331900 345910 333100 382980 367460 386700 354280 394240 341110 392510 415860 360890 385980 302610 193900 300270 323780 309500 335380 347080 341210 388180 369180 396760 360040 402010 356210 397570 414990 345780 366830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 907380000 6360 473;4277 6027 11991;11992;11993 9680;9681 9680 2 9606 Homo sapiens -0.001429233453109191 EHGLNPDVVQNIQDICNSK Unmodified 2179.0328 0.032780052 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;A0A7P0T8C6;Q7Z2W4-3 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 0 6 0 1 53.944 54.021 3 2.261E-39 15628 20230619_1886_Aki_TMTPro18x_K_F6 250.1 236.68 61335 29479 52327 61380 47605 49455 54494 55620 60334 67444 63208 60973 81823 61969 57159 81892 67109 73275 56499 27304 53879 59153 50008 51015 54751 56728 61315 67318 65492 62264 81696 64976 59245 81416 64156 69666 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233950000 6361 2740 6028 11994 9682 9682 1 9606 Homo sapiens -0.009575027323535323 EHGQCADVDECSLAEK Unmodified 1846.7462 0.74617644 4135 Q6UXH1-4;Q6UXH1;Q6UXH1-6;Q6UXH1-5 CRELD2 Cysteine-rich with EGF-like domain protein 2 yes no 0 0 0 2 0 1 40 40.07 3 0.00020607 9835 20230619_1881_Aki_TMTPro18x_K_F2 94.203 82.411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6362 4135 6029 11995 9683 9683 1 9606 Homo sapiens -0.14332680226198136 EHHFEAIALVEK Unmodified 1421.7303 0.73031409 3062 H3BLU7;V9HWA2;O43488 AKR7A2;HEL-S-166mP Aflatoxin B1 aldehyde reductase member 2 yes no 0 0 0 4.5 0.5 1 1 46.484 46.544 4 0.00029331 12305 20230619_1885_Aki_TMTPro18x_K_F5 98.353 77.69 44337 12073 24402 35719 40150 25195 41672 45085 59032 38700 51939 60382 59346 53786 26718 59590 30350 72419 40673 11316 26732 33952 40428 26733 42437 44521 58791 40134 53945 60105 58796 55994 28146 60402 29295 68494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53513000 6363 3062 6030 11996;11997 9684 9684 1 9606 Homo sapiens 0.03631814172013037 EHHGNAMQPSVK Oxidation (M) 1349.6146 0.6146324 42 A0A024QZK4;Q96FC7;Q96FC7-2 PHYHIPL Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 1 0 5.25 0.433 3 1 26.007 26.068 4 0.0022658 4802 20230619_1885_Aki_TMTPro18x_K_F5 85.845 72.645 46254 3175.8 29311 34389 27296 15865 29803 44611 48300 47617 61922 64530 64322 50876 24064 57576 31108 55623 42395 3079.6 31158 31883 28549 18076 30526 43640 48677 48434 62930 64281 63609 53280 25767 57546 29865 52762 5 2 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 49096000 6364 42 6031 11998;11999;12000;12001 9685;9686;9687;9688;9689 9687 15 5 9606 Homo sapiens -0.046190329504725014 EHHGNAMQPSVK Unmodified 1333.6197 0.61971778 42 A0A024QZK4;Q96FC7;Q96FC7-2 PHYHIPL Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 0 5.5 0.5 1 1 29.923 29.976 4 0.00019334 5775 20230619_1886_Aki_TMTPro18x_K_F6 86.911 72.22 41766 9886.7 25855 23085 25134 19028 29654 35976 46566 38440 44695 53639 56717 42455 23396 48498 23564 43784 38327 9235.9 27546 22185 26292 19934 30171 35627 46380 39172 46472 53363 55863 44484 24536 48306 22684 41562 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22615000 6365 42 6031 12002;12003 9690;9691 9691 2 9606 Homo sapiens -0.033747290878636704 EHHWVPR Unmodified 959.47258 0.47258326 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;Q2TU89;H0YCH5 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 5 0 1 27.403 27.476 3 0.012239 4837 20230619_1885_Aki_TMTPro18x_K_F5 83.614 50.774 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6366 3752 6032 12004 9692 9692 1 9606 Homo sapiens -0.008774131198151736 EHIAASVSIPSEK Unmodified 1366.7092 0.70924429 731 P46379-3;P46379;P46379-2;A0A7I2V508;A0A0G2JK23;A0A024RCR6;A0A1U9X7A6;A0A1U9X7A9;A0A7P0MQS5;P46379-5;A0A0G2JL47;P46379-4;X6REW1;A0A0G2JJM1;F6S6P2;F6TC96;F6WML8;F6X9W3;F6VEM6;F6U341;A0A1B0GX79;A0A0G2JJR8;A0A7I2V3H1;F6XTU0;F6U1F2;F6UR09 BAG6;BAT3 Large proline-rich protein BAG6 yes no 0 0 0 5.5 0.5 1 1 44.369 44.454 3 1.7825E-05 11406 20230619_1885_Aki_TMTPro18x_K_F5 118.87 92.159 97781 56718 89639 106210 101470 101730 111100 109460 133720 117420 125610 139740 148040 121040 111710 124660 149200 129210 90189 52388 92008 103050 104680 103330 112140 111540 134600 118940 130300 140150 148660 125670 116360 125450 142250 122750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253360000 6367 731 6033 12005;12006 9693 9693 1 9606 Homo sapiens 0.040558040725272804 EHIEQQIQTYQR Unmodified 1571.7692 0.76921879 934 Q63HP7;Q5G0E1;A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5 DKFZp686P1551;EXOC7 Exocyst complex component 7 yes no 0 0 0 4 0 1 39.444 39.487 3 1.6658E-13 9323 20230619_1883_Aki_TMTPro18x_K_F4 210.15 164.89 38929 20832 35824 42339 40918 37888 41318 45129 51740 45717 57622 62593 58967 51019 45254 47185 63212 59628 35895 19275 36755 40897 42074 38799 41974 45626 52324 46682 58914 62356 59504 52808 47255 48177 60283 56516 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107750000 6368 934 6034 12007 9694 9694 1 9606 Homo sapiens 0.0062049473574461445 EHIMQMLQNPDWK Oxidation (M) 1684.7701 0.77014677 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6 IPO5;RANBP5 Importin-5 yes no 0 1 0 7.5 0.5 1 1 52.231 52.306 3 0.013633 14529 20230619_1888_Aki_TMTPro18x_K_F8 60.401 47.338 100480 77794 106330 109280 114700 120330 116660 120110 125160 125700 124140 127230 140700 119450 120340 149070 132190 140010 92921 71489 107660 107900 118460 120820 117810 122850 127050 126780 128160 128870 142110 125030 123550 148740 126420 133050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157390000 6369 782 6035 12008;12009 9695 9695 471 1 9606 Homo sapiens -0.04484750211213395 EHINLGCDMDFDIAGPSIR Oxidation (M) 2174.9725 0.97248798 1286 A0A1L1UHR1;P21796;B3KTS5;C9JI87 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 1 0 3.5 0.5 1 1 54.163 54.194 3 1.9067000000000002E-25 16014 20230619_1882_Aki_TMTPro18x_K_F3 214.9 205.15 67813 34547 68603 79979 103040 72679 102750 95024 91346 83639 84179 84846 103430 85389 86954 96708 70202 83377 62563 32047 70179 76871 103910 74582 103210 95254 93454 85163 87569 86135 104120 88653 87847 96244 67422 79285 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 667630000 6370 1286 6036 12010;12011 9696;9697 9696 814 2 9606 Homo sapiens -0.0679993638709675 EHINLGCDMDFDIAGPSIR Unmodified 2158.9776 0.97757336 1286 A0A1L1UHR1;P21796;B3KTS5;C9JI87 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 0 5 0 1 58.635 58.691 3 1.2809000000000001E-24 17356 20230619_1885_Aki_TMTPro18x_K_F5 199.41 191.22 26222 20023 27385 24424 22387 24576 30252 25513 34540 27955 28413 25636 30205 25075 21882 27961 23621 22941 24245 18373 27631 24320 23856 24865 30169 26079 34677 28069 29489 26121 30371 26034 22527 27759 22579 21845 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33782000 6371 1286 6036 12012 9698 9698 1 9606 Homo sapiens -0.055556325245106564 EHIPGTLR Unmodified 921.50321 0.50321468 1745 A0A8C8MSB2;B2R673;O00330-3;O00330;E9PLU0;E9PRI6 PDHX Pyruvate dehydrogenase protein X component, mitochondrial yes no 0 0 0 5.5 0.5 1 1 34.252 34.339 3 0.0013456 7282 20230619_1885_Aki_TMTPro18x_K_F5 115.49 95.165 31697 18261 30024 34985 40256 39705 43083 41002 46573 28250 38822 33632 35831 31413 30567 37286 34761 34587 29243 16873 30824 33987 41042 39800 43361 41465 46859 29429 40026 33876 36425 32773 31445 37207 33217 32881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49343000 6372 1745 6037 12013;12014 9699;9700 9699 2 9606 Homo sapiens 0.039323204745642215 EHIYDLR Unmodified 944.47158 0.4715802 1109 A0A0S2Z4Y4;A0A0S2Z5H3;Q14677;Q14677-3;Q14677-2 CLINT1 Clathrin interactor 1 yes no 0 0 0 3 0 1 38.099 38.152 3 0.0038123 8817 20230619_1882_Aki_TMTPro18x_K_F3 113.89 56.786 60007 25957 53285 68188 77996 67907 65914 66171 114220 87381 84323 84634 85514 74806 73298 90293 65860 79076 55272 24165 55124 65282 78706 68623 68603 68292 112390 87169 87942 85695 86667 78283 74443 89820 63178 75178 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123710000 6373 1109 6038 12015 9701 9701 1 9606 Homo sapiens -0.0028767227938715223 EHLELFWSR Unmodified 1215.6037 0.60365701 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;J3KS13 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 6.5 0.5 1 1 52.985 53.059 3 1.0046E-08 15200 20230619_1886_Aki_TMTPro18x_K_F6 178.55 156.67 168790 75508 147140 165580 126350 138730 170940 172070 228100 189520 173670 178820 199280 183650 166040 203220 144690 194170 155470 70033 151080 159330 134210 142930 171500 173970 226890 190360 181870 182180 201070 190250 168480 203310 138990 184340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 285800000 6374 826 6039 12016;12017 9702;9703 9702 2 9606 Homo sapiens 0.00447932737552037 EHLGHESDNLLFVQITGK Unmodified 2036.0327 0.032703697 4103 Q6FI81-3;Q6FI81;H3BV90;H3BT65;H3BUG4;B4DHB9;H3BPG7 CIAPIN1 Anamorsin yes no 0 0 0 6 0 1 50.694 50.771 5 0.019638 14259 20230619_1886_Aki_TMTPro18x_K_F6 56.407 33.604 25033 30363 31211 28335 31757 38297 35707 28605 33733 28841 37833 31717 31876 35406 40195 35980 47396 40367 23265 27755 31191 28935 33043 37761 35706 29919 34606 29253 38344 32234 33184 36400 41097 36410 45230 38320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17963000 6375 4103 6040 12018 9704 9704 1 9606 Homo sapiens 0.05612865329908345 EHLLDQLK Unmodified 994.54475 0.54474515 1656 A0A7I2V3A9;B2RAM6;P52732;Q59GZ5 KIF11 Kinesin-like protein;Kinesin-like protein KIF11 yes no 0 0 0 5.5 0.5 1 1 48.358 48.436 3 0.010069 13252 20230619_1886_Aki_TMTPro18x_K_F6 75.043 38.597 30314 22246 27142 29648 31087 34156 32377 28912 45979 33247 32157 31835 34193 27384 27949 34029 31787 32625 27988 20435 27911 29382 32044 34074 32968 30025 45488 33362 33720 32230 34533 28754 28776 33994 30382 30999 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230650000 6376 1656 6041 12019;12020 9705 9705 1 9606 Homo sapiens 0.047254564432250845 EHLLQSNIGTGEK Unmodified 1424.726 0.72595699 4076 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 5.5 0.5 1 1 42.968 43.056 3 0.013257 10817 20230619_1885_Aki_TMTPro18x_K_F5 63.894 41.662 85455 49441 77278 90884 82558 85426 96542 96026 86733 98808 117440 135240 138370 122220 85605 105050 166770 141180 78811 45654 79345 88239 85638 86989 96258 97480 90184 100770 120020 135110 138150 125600 92539 107830 158600 133800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141810000 6377 4076 6042 12021;12022 9706 9706 1 9606 Homo sapiens 0.030583049584492983 EHLLTNHLK Unmodified 1103.6087 0.60874239 560 A0A024R983;P10155;P10155-3;P10155-5;P10155-4;B3KN94 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 0 0 7.5 0.5 1 1 38.349 38.374 4 0.0003274 8610 20230619_1887_Aki_TMTPro18x_K_F7 123.75 66.199 347930 61700 268580 336260 383180 253650 364350 389590 468490 395490 444340 426830 475620 386420 270800 558830 334610 460440 319540 59319 281360 315420 387450 265740 371610 388760 470250 400330 457920 431000 474580 408940 284170 552400 320410 437910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 269310000 6378 560 6043 12023;12024 9707;9708 9707 2 9606 Homo sapiens 0.06108236600175587 EHLNEPGTR Unmodified 1051.5047 0.50467125 4702 Q9Y263;E5RIM3;H0YBW4 PLAA Phospholipase A-2-activating protein yes no 0 0 0 2 0 1 26.948 27.026 3 3.0226E-05 4629 20230619_1881_Aki_TMTPro18x_K_F2 137.95 124.55 4825.5 1709.3 4903.7 6920.4 6893.7 7598.6 9776.1 9614.7 11497 7025.7 10983 10736 9662.1 7644.1 7347.4 5959.7 10280 10060 4446.8 1611.9 5021.3 6557.4 7079.7 7665 9734.6 9614.6 11568 7355.5 11229 10623 9790.7 7904.2 7665.5 6251 9805.9 9512.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9995200 6379 4702 6044 12025 9709 9709 1 9606 Homo sapiens -0.019020902273268803 EHLNQGSSQETDK Unmodified 1471.6539 0.65391426 3446 P13521;B4DQJ6 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 2 0 1 31.365 31.428 3 8.6185E-08 6274 20230619_1881_Aki_TMTPro18x_K_F2 148.48 121.76 11198 3965.9 11063 19073 11508 11529 14791 22612 20283 10498 22558 26766 16952 18632 14844 9675.3 24580 22519 10317 3762.4 11305 17888 12005 12450 14909 22007 20376 11746 22813 26140 17415 19000 15637 10607 23410 21260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10499000 6380 3446 6045 12026 9710 9710 1 9606 Homo sapiens -0.0630465418591939 EHMDAINHDTK Oxidation (M) 1325.567 0.56701351 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 1 0 2 0 1 28.163 28.238 4 0.0017469 5027 20230619_1881_Aki_TMTPro18x_K_F2 91.313 75.926 8936.3 2493.1 7440.7 12012 13071 7047.2 9419.6 13560 11975 10323 11037 12358 11788 8810.8 6537.5 8356.1 10283 12500 8217.7 2370.7 7784.4 11263 12983 7651.2 9795.8 13310 12021 10657 11401 12324 11751 9192.9 6957.2 8630.9 9817.6 11821 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9271600 6381 4191 6046 12027 9711 9711 2697 1 9606 Homo sapiens -0.08274731941332902 EHMGDILYK Oxidation (M) 1120.5223 0.52229515 3566 P38606-2;P38606;B7Z2V6;A0A994J477 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 1 0 4 0 1 41.018 41.06 3 0.0054495 9992 20230619_1883_Aki_TMTPro18x_K_F4 71.349 44.251 81895 54329 100460 115930 130390 150010 123320 129800 165280 124260 165360 183990 165230 164710 158730 173380 182870 218530 75779 50254 101070 112310 132940 148500 126050 133850 165820 127810 169780 183440 168520 170910 162950 176570 174990 206950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96591000 6382 3566 6047 12028 9712 9712 2233 1 9606 Homo sapiens -0.03314511016696997 EHMGNVVEALIALTN Unmodified 1609.8134 0.81339179 350 A0A024R5Q1;Q9NX55 hCG_2003792;HYPK Huntingtin-interacting protein K yes no 0 0 0 7.5 0.5 1 1 65.368 65.391 3 0.067897 20139 20230619_1888_Aki_TMTPro18x_K_F8 40.237 26.575 21514 17121 20690 21629 22914 17622 22451 23627 20874 24843 26830 22886 25623 22216 22292 26478 26927 26477 19883 15713 21115 21429 23544 18284 22630 23754 21611 24966 27166 23319 26034 23165 23006 26528 25715 25149 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34338000 6383 350 6048 12029;12030 9713;9714 9714 2 9606 Homo sapiens 0.03287762837749142 EHMMDGVTTR Oxidation (M) 1191.5012 0.50124213 3184 Q2TSD3;L7RSM7;P17252;A0A169TED2;Q59FI5 PRKCA Protein kinase C;Protein kinase C alpha type yes no 0 1 0 2 0 1 28.713 28.785 3 0.0018478 5274 20230619_1881_Aki_TMTPro18x_K_F2 82.171 63.391 11272 10355 8754.9 10145 13722 10263 11316 12126 15617 12130 12671 11019 15815 12908 10796 9520.7 12666 12202 10412 9476.5 9179.3 10273 13771 10432 11678 12255 15546 12235 13258 11300 15799 13083 11161 9779.6 12097 11563 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11931000 6384 3184 6049 12031 9715 9715 1848 1 9606 Homo sapiens -0.0868484438788073 EHMQPTHPIR Oxidation (M) 1260.6033 0.60333943 3701 P61981;B3KNB4;B4DE78;B4DHC4 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes no 0 1 0 4.5 1.12 1 1 1 1 23.001 23.083 3 4.2199E-06 3786 20230619_1885_Aki_TMTPro18x_K_F5 160.77 135.3 94976 24982 76849 91793 106320 68543 103050 109910 124780 109490 131670 141200 125930 112750 88361 139290 124560 138720 87311 23558 80051 86802 107690 72016 104760 109430 126100 111610 134520 140960 126980 118580 92802 139360 118920 131710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 330010000 6385 3701 6050 12032;12033;12034;12035 9716;9717 9717 2388 2 9606 Homo sapiens -0.016538102539470856 EHMQPTHPIR Unmodified 1244.6084 0.60842481 3701 P61981;B3KNB4;B4DE78;B4DHC4 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes no 0 0 0 5.5 0.5 1 1 24.784 24.835 3 4.9378E-10 3847 20230619_1885_Aki_TMTPro18x_K_F5 179.57 148.08 99779 41350 92803 116350 183230 125290 133540 135050 130540 116070 152280 183730 144390 270090 124480 133440 142740 150900 91925 38564 96261 111290 181200 126290 137420 136820 134020 120520 155080 186240 147660 267810 127990 137390 136460 143110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 233540000 6386 3701 6050 12036;12037 9718;9719 9718 2 9606 Homo sapiens -0.0040950639131551725 EHNPTQYEER Unmodified 1301.5636 0.56364269 4493 Q9H0C8;F8SNU7;H7C2I8 ILKAP;ILKAP3 Integrin-linked kinase-associated serine/threonine phosphatase 2C yes no 0 0 0 1 0 1 28.384 28.384 3 1.2053E-05 5330 20230619_1880_Aki_TMTPro18x_K_F1 125.97 108.5 12966 4629.3 8552.9 16196 15045 12727 16123 14708 19500 14082 18277 19134 21235 13680 11087 16720 16940 19161 11913 4346.2 9197.8 15325 15126 13165 16282 14887 19604 14424 18928 19011 21069 14472 11807 16872 16167 18165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94098000 6387 4493 6051 12038 9720 9720 1 9606 Homo sapiens -0.07507658723670829 EHNVFQNK Unmodified 1014.4883 0.4882929 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 0 6 0.816 1 1 1 36.432 36.505 3 0.00032935 8160 20230619_1886_Aki_TMTPro18x_K_F6 135.83 100.54 201110 84930 173100 167490 219580 189630 200700 214180 279970 204620 272390 265330 251190 208500 203960 230640 264120 280260 185180 78664 178750 162580 223690 190620 205920 216810 280090 209250 278740 264750 254800 218180 211700 234110 252240 265610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 310800000 6388 380 6052 12039;12040;12041 9721;9722 9722 2 9606 Homo sapiens -0.018371713934357103 EHNVVAPYK Unmodified 1055.54 0.53999412 2137 B2RA06;A8K9G4;Q92636;Q92636-2;B4E3V9 NSMAF Protein FAN yes no 0 0 0 6 0 1 37.702 37.778 3 0.032668 8634 20230619_1886_Aki_TMTPro18x_K_F6 49.35 32.325 45703 29898 38993 40984 45943 49406 44626 46224 56960 51463 56540 56041 63328 53991 50484 59810 59123 62997 42156 27488 40282 40581 47163 49241 45458 47572 57308 51891 58308 56629 63812 56073 52090 60165 56512 59787 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21951000 6389 2137 6053 12042 9723 9723 1 9606 Homo sapiens 0.01444572300465552 EHPDAWTR Unmodified 1010.457 0.45699277 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V2S3;A0A7I2V3N0;A0A7I2V4A3;A0A7I2YQX3;C9JKM9;C9J673;A0A7I2V2C5;A0A7I2V3J1;A0A7I2YQP1;A0A7P0Z4B7;F8WF71;C9IYM2 XPO1 Exportin-1 yes no 0 0 0 2.5 0.5 1 1 32.187 32.256 3 4.4899E-05 6571 20230619_1881_Aki_TMTPro18x_K_F2 171.73 142.4 198170 147680 188750 191890 233230 234040 223280 243730 259750 243800 276140 279250 276280 233830 246270 249750 324740 266030 183070 135610 193180 190740 238350 233710 226900 248220 263180 247440 282550 280310 280610 243550 255260 251660 309540 252720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 475680000 6390 3228 6054 12043;12044 9724;9725 9724 2 9606 Homo sapiens -0.047817444275324306 EHPFLVK Unmodified 868.48069 0.48068833 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7.5 0.5 1 1 43.401 43.445 3 0.0056623 10650 20230619_1887_Aki_TMTPro18x_K_F7 105.12 69.236 365500 248350 366830 386780 340030 458950 415200 388740 526940 450480 509240 563650 563340 453060 480030 552230 492670 555510 337620 228630 372380 379940 358140 456600 417690 403780 529480 455620 525970 563230 569070 476250 490720 553340 471690 527360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 502670000 6391 3758 6055 12045;12046 9726;9727 9726 2 9606 Homo sapiens 0.04118721076940801 EHPNYVDCYLR Unmodified 1464.6456 0.64559818 2097 Q6PD62;A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog yes no 0 0 0 4.5 0.5 1 1 42.905 42.968 3 0.075861 10799 20230619_1885_Aki_TMTPro18x_K_F5 30.336 19.506 66510 49217 64045 77091 80435 75842 89829 78222 105440 83358 85372 87994 86440 80691 85103 100740 92928 86771 61444 45296 65589 75499 82414 76843 90441 79933 105670 84163 88613 88897 88194 84475 87080 100100 88795 82586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100630000 6392 2097 6056 12047;12048 9728 9728 1 9606 Homo sapiens -0.06813879636229103 EHPTVVPSHK Unmodified 1129.588 0.58800695 84 Q96S66;A0A6Q8PG75;Q96S66-2;A0A6Q8PEZ7;A0A024R0G0;A0A6Q8PHQ1;A0A6Q8PG30;A0A024R095;A0A6Q8PGA4;Q96S66-4;Q96S66-3;A0A8I5KRC0;A0A6Q8PG14;Q5T1P5;A0A6Q8PFF7 CLCC1 Chloride channel CLIC-like protein 1 yes no 0 0 0 6 0 1 31.625 31.658 4 0.024539 6426 20230619_1886_Aki_TMTPro18x_K_F6 64.439 39.053 18242 13944 21127 23627 24753 25591 23294 28421 23772 20468 33676 38578 27399 28764 28596 19767 37012 35727 16883 12844 21289 23078 25360 25780 23613 28623 24551 21651 33848 37983 28259 29503 29470 20935 35322 33769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19776000 6393 84 6057 12049 9729 9729 1 9606 Homo sapiens 0.02839646220513714 EHPVIESHPDNALEDLRLDKPFPELR Unmodified 3065.557 0.55704775 3858 Q13564-3;Q13564-2;Q13564;Q13564-4;H3BMR3;J3QRA5 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes no 0 0 2 6 0 1 54.572 54.649 5 0.092294 15856 20230619_1886_Aki_TMTPro18x_K_F6 41.188 22.941 27205 25260 28936 29849 24672 34611 30214 31573 37234 32156 35909 29592 33286 30325 35957 37409 29219 32321 25190 23155 29201 29833 26176 34550 30371 32474 37455 32407 36754 30223 34186 31618 36156 37194 28043 30741 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141710000 6394 3858 6058 12050 9730 9730 1 9606 Homo sapiens 0.10689151113410844 EHPVKQELER Unmodified 1263.6571 0.65714914 2813 D3DRX8;J3KPZ4;Q13901 hCG_2017386;C1D Nuclear nucleic acid-binding protein C1D yes no 0 0 1 4 0 1 33.077 33.134 4 0.0062354 6796 20230619_1883_Aki_TMTPro18x_K_F4 80.834 62.103 29627 29429 35041 33184 47244 35913 45049 36863 33924 39003 48873 24452 22581 17331 47669 14291 21492 15221 27473 26959 35304 33258 47864 36185 45201 37663 35777 38836 48169 25281 25015 17977 46402 14577 20773 14470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14174000 6395 2813 6059 12051 9731 9731 1 9606 Homo sapiens 0.03586685449408833 EHPVVISK Unmodified 907.51272 0.51271674 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 6.5 0.5 1 1 37.926 37.996 3 0.0012922 8452 20230619_1887_Aki_TMTPro18x_K_F7 116.05 67.489 271140 161620 232580 241480 349660 311850 295550 310800 355940 335380 396410 367760 395110 341130 323220 367510 412760 365930 250000 148800 241190 238170 352070 310070 303020 318110 360800 338670 404450 371120 399950 354110 335090 368730 393740 347750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 422090000 6396 2980 6060 12052;12053 9732;9733 9733 2 9606 Homo sapiens 0.05526088760097991 EHPWEVMPDLYFYRDPEEIEK Oxidation (M) 2737.237 0.23701875 205 C9J9K3;A0A8V8TMX1;A0A024R2L6;A0A0C4DG17;A0A8V8TLA4;P08865;A0A8I5KQE6;Q96RS2;A0A8V8TMP3 RPSA 40S ribosomal protein SA yes no 0 1 1 3 0 1 59.18 59.209 4 2.58E-07 18117 20230619_1882_Aki_TMTPro18x_K_F3 105.32 98.86 16965 10642 12562 17740 14734 18011 15535 17192 24293 22896 21850 27973 28686 28256 16533 47231 33012 58017 15630 9808.9 13193 17317 15197 18159 15885 17773 24165 23000 22855 28209 28534 30143 18117 47645 31599 54899 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32656000 6397 205 6061 12054 9734 9734 126 1 9606 Homo sapiens -0.06211028152256404 EHPWEVMPDLYFYRDPEEIEK Unmodified 2721.2421 0.24210413 205 C9J9K3;A0A8V8TMX1;A0A024R2L6;A0A0C4DG17;A0A8V8TLA4;P08865;A0A8I5KQE6;Q96RS2;A0A8V8TMP3 RPSA 40S ribosomal protein SA yes no 0 0 1 4.5 1.12 1 1 1 1 61.573 61.607 4 0.01383 19097 20230619_1882_Aki_TMTPro18x_K_F3 62.663 52.24 32758 33438 34431 43269 47841 59602 50391 46338 50972 48311 40847 49613 57842 52886 43219 59588 52301 69092 30350 30670 35111 43070 48736 58699 50647 48312 51534 48788 43187 50406 57838 54804 44802 60250 50070 65462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152230000 6398 205 6061 12055;12056;12057;12058 9735 9735 1 9606 Homo sapiens -0.0496672428967031 EHPYGRY Unmodified 920.41407 0.41406533 3807 Q07666;B4DDX2;B2R7B5;Q07666-2;B4E043;Q07666-3;Q5VWX1 KHDRBS1;KHDRBS2 KH domain-containing, RNA-binding, signal transduction-associated protein 1;KH domain-containing, RNA-binding, signal transduction-associated protein 2 yes no 0 0 1 4.5 1.12 1 1 1 1 28.601 28.673 3 0.085519 5023 20230619_1883_Aki_TMTPro18x_K_F4 44.42 23.938 48812 38885 43675 46514 73663 68547 58638 66226 85877 20190 22413 23368 24409 19646 35035 20177 28823 17524 45088 35668 45247 46640 73701 67607 60783 66547 83219 23090 26099 23488 25375 20413 35007 20174 27559 16714 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59614000 6399 3807 6062 12059;12060;12061;12062 9736 9736 1 9606 Homo sapiens -0.04932514484960393 EHQHEEIQNVR Unmodified 1417.6698 0.66983909 4099 Q6DD88;F5H6I7;B4DXC4 ATL3 Atlastin-3 yes no 0 0 0 1.5 0.5 1 1 23.107 23.142 4 2.4514E-12 3802 20230619_1880_Aki_TMTPro18x_K_F1 166.87 139.01 52041 20331 46213 51758 67871 53386 61917 64042 73160 67983 72133 65274 81027 63867 59967 83436 73668 85497 47919 18929 47766 49658 68478 54100 63112 64775 73869 68416 74373 66406 81388 66998 62240 83567 70435 81141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221190000 6400 4099 6063 12063;12064 9737 9737 1 9606 Homo sapiens -0.022289031583341057 EHQISPGDFPSLR Unmodified 1481.7263 0.72629134 2224 Q9H4M9;B2R5U3;A0A024R571;B4DMV9;B4DR44;B4DTR4;B4DZH9;C9J2Z4;C9JC03 EHD1 EH domain-containing protein 1 yes no 0 0 0 5.5 0.5 1 1 46.414 46.494 3 0.0010372 12284 20230619_1885_Aki_TMTPro18x_K_F5 72.681 58.328 47956 37097 43425 45438 46737 51060 51736 47096 63785 44662 41955 42095 47672 37620 47547 51360 45517 46702 44294 34041 44553 45278 48441 51118 52218 48337 63383 45235 44335 42719 48456 39690 48261 51120 43578 44403 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64004000 6401 2224 6064 12065;12066 9738 9738 1 9606 Homo sapiens 0.004697246783280207 EHSDYVR Unmodified 904.40389 0.40389457 3028 H0Y8P4;Q8TED0;Q8TED0-3 UTP15 U3 small nucleolar RNA-associated protein 15 homolog yes no 0 0 0 1 0 1 25.801 25.801 3 0.085129 4418 20230619_1880_Aki_TMTPro18x_K_F1 44.395 29.877 2251.6 1596.5 2210 2993.8 4432.2 3681.3 3227 4738.2 4289 2483.4 4999.4 3909 2686.8 3474.5 3658.4 2027 4182.6 2815.5 2079.9 1473.2 2285.2 2915.3 4387.8 3694.1 3359 4702.1 4326.2 2674.9 4987.6 3893.2 2869.7 3516.1 3722.3 2111.2 3987.3 2670.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1769200 6402 3028 6065 12067 9739 9739 1 9606 Homo sapiens -0.05213122210193433 EHSEEPGICEEQNPEAER Unmodified 2138.8811 0.88109002 2333 B4DYK9;B7ZMH1;B2RWN6;F5H1N7;B7ZVZ4;A0A2R8Y6P1;Q6ZU35 KIAA1211 Uncharacterized protein KIAA1211 yes no 0 0 0 1 0 1 34.563 34.563 3 5.337E-49 7791 20230619_1880_Aki_TMTPro18x_K_F1 286.73 283.46 14651 4203.9 9356.3 9484.7 9215.9 8155.5 9774.3 9354.2 11720 11188 15476 17285 18821 11536 11406 17639 12594 14571 13452 3915.9 9938.6 9121.3 9600.2 8372.1 9887.6 9529.9 11975 11389 15849 17081 18716 12421 11831 17437 12052 13865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105060000 6403 2333 6066 12068 9740 9740 1 9606 Homo sapiens -0.1427952855069634 EHSNPNYDK Unmodified 1102.468 0.46795139 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3 0 1 30.073 30.167 3 0.00034884 5673 20230619_1882_Aki_TMTPro18x_K_F3 117.7 91.025 8656 5200 15181 15159 24723 18166 16582 23764 15648 9360.3 20070 26286 12335 14347 22620 8568.1 24856 21169 8040.6 4842.6 15009 14518 24611 18267 17188 23489 16136 10729 20106 25488 13352 14873 22863 9455.4 23735 19986 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13214000 6404 3881 6067 12069 9741 9741 1 9606 Homo sapiens -0.07918386843903136 EHTALLK Unmodified 810.45995 0.45995289 2764 C9K025;P18077;F8WBS5;F8WB72 RPL35A 60S ribosomal protein L35a yes no 0 0 0 6 0.816 1 1 1 37.556 37.634 3 0.0010813 8562 20230619_1886_Aki_TMTPro18x_K_F6 152.39 105.82 849550 288320 718310 772990 985230 774800 941760 952980 1190500 948200 953700 864770 1187700 924540 730410 1072700 1096000 925750 781680 269050 744600 740130 999270 787280 959390 960910 1189100 956510 998650 884410 1182800 959850 772740 1066500 1044000 881460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3318799999.9999995 6405 2764 6068 12070;12071;12072 9742;9743 9742 2 9606 Homo sapiens 0.04714130697288965 EHTAWVVK Unmodified 968.50797 0.50796571 1825 A0A8V8TMD9;Q8N122-3;Q8N122;Q6DKI0 RPTOR;raptor Regulatory-associated protein of mTOR yes no 0 0 0 7.5 0.5 1 1 41.898 41.932 3 0.0040721 10068 20230619_1887_Aki_TMTPro18x_K_F7 93.195 74.098 38019 26682 39082 42671 42719 48273 48002 47043 54304 41890 55947 53779 52539 48168 53450 52167 62043 50278 35132 24568 39696 41829 44233 48332 48286 48016 54962 42998 57168 53899 53805 50052 54797 52268 59198 47818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21029000 6406 1825 6069 12073;12074 9744 9744 1 9606 Homo sapiens 0.0224520461732709 EHTAYYIK Unmodified 1023.5025 0.50254598 3533 P31930;B4DUL5;B4DZB9 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 6.5 0.5 1 1 39.491 39.568 3 0.00025129 9068 20230619_1887_Aki_TMTPro18x_K_F7 153.78 97.347 336230 136680 279030 341900 474900 398020 464610 458610 582600 241170 287310 261860 273040 237690 288080 304690 298030 251800 309490 127170 291470 328750 476780 399440 472180 458480 573920 256590 307950 264530 280050 249390 293300 302140 284730 239890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 448930000 6407 3533 6070 12075;12076 9745;9746 9746 2 9606 Homo sapiens -0.008265189651410765 EHTEEDFK Unmodified 1033.4353 0.43525428 2976 F5H702;Q96GC5-3;Q96GC5;F5H8D0 MRPL48 39S ribosomal protein L48, mitochondrial yes no 0 0 0 2.25 0.829 1 1 2 35.823 35.861 3 3.1239E-05 8298 20230619_1880_Aki_TMTPro18x_K_F1 178.94 105.68 245160 96937 239840 307240 397880 304140 327340 368420 391200 280210 409920 398810 384230 355550 291400 200670 396760 395660 225920 90696 246710 292500 397890 309150 336130 369540 395190 291620 418330 397830 388760 360110 303230 215430 378590 373740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 155220000 6408 2976 6071 12077;12078;12079;12080 9747;9748;9749;9750 9747 4 9606 Homo sapiens -0.08012593966759596 EHTLAWK Unmodified 883.4552 0.45520186 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2;F8WD69;C9JBJ1;C9JTV6;C9JZG2;C9JKQ7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 7.5 0.5 1 1 42.048 42.085 3 0.00055784 10067 20230619_1887_Aki_TMTPro18x_K_F7 155.51 110.82 315770 142890 275500 271920 330080 324440 314760 330850 410350 357630 349000 330040 394110 291430 305180 339450 332320 318600 290860 132210 283940 264550 338070 324110 321210 338120 410210 359250 362690 335000 396280 304640 313560 339120 317600 302880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 310560000 6409 3488 6072 12081;12082 9751;9752 9751 2 9606 Homo sapiens 0.008812465545133819 EHTQLLQQSSSQK Unmodified 1512.7532 0.75323437 497 A0A6Q8PF55;A0A6Q8PHH6;A0A6Q8PFI6;A0A6Q8PH70;A0A6Q8PFW1;A0A6Q8PGT8;A0A6Q8PFL5;A0A6Q8PFT9;A0A6Q8PGW1;A0A6Q8PG02;A0A6Q8PGF7;A0A024R870;A0A6Q8PGB2;Q6UWE0-2;Q6UWE0 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 yes no 0 0 0 6 0 1 36.43 36.49 3 1.8453E-06 8150 20230619_1886_Aki_TMTPro18x_K_F6 132.79 106.02 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6410 497 6073 12083 9753 9753 1 9606 Homo sapiens 0.01736788498851638 EHVDVIAK Unmodified 909.49198 0.4919813 1532 A0A3B3IUD7;Q14690 PDCD11 Protein RRP5 homolog yes no 0 0 0 3 0 1 39.367 39.421 3 0.0090281 9372 20230619_1882_Aki_TMTPro18x_K_F3 78.334 45.494 29263 18417 28075 26120 34743 35359 34263 32356 51888 35222 37985 42662 39316 31530 34251 41622 45683 39045 27011 16942 28705 25865 35559 34984 35096 33337 51258 35706 39707 42586 39851 33421 35587 41499 43552 37136 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42034000 6411 1532 6074 12084 9754 9754 1 9606 Homo sapiens 0.03361498380422745 EHVEEISELFYDAK Unmodified 1707.7992 0.79918151 1442 B5BUB1;A0A384MTR5;Q9Y265;H7C4G5 RUVBL1 RuvB-like 1 yes no 0 0 0 2.5 0.5 1 1 60.483 60.504 3 2.8448E-07 18619 20230619_1882_Aki_TMTPro18x_K_F3 140.08 115.52 41153 16589 34470 46601 38694 34506 40421 40040 51498 47318 42674 52333 57401 42651 40979 62669 47005 60734 37881 15474 35697 44367 39873 35906 40990 40746 51508 47584 44892 52563 57302 45396 42418 62473 45011 57656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112070000 6412 1442 6075 12085;12086 9755 9755 1 9606 Homo sapiens -0.026406111095866436 EHVGTDQFGNK Unmodified 1230.5629 0.56291441 1143 A0A0S2Z5U1;Q8N183;A0A0S2Z5U2;D6RA56;A0PJB9;A0A7I2V3X5;A0A7I2V4Z7;A0A0S2Z5T4;A0A7I2YQX2 NDUFAF2 Mimitin, mitochondrial yes no 0 0 0 4 0 1 37.854 37.897 3 3.8097E-05 8671 20230619_1883_Aki_TMTPro18x_K_F4 127.92 108.18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6413 1143 6076 12087 9756 9756 1 9606 Homo sapiens -0.04314453372717253 EHVIEALR Unmodified 965.52943 0.52942943 3513 X1WI28;X5D2T3;P27635;F8W7C6;H7C123;X5D7P1;H7C2C5 RPL10 60S ribosomal protein L10 yes no 0 0 0 4 0.816 1 1 1 38.698 38.76 3 3.547E-05 9014 20230619_1883_Aki_TMTPro18x_K_F4 176.84 117.92 388960 138080 308820 400800 382330 376510 430070 417330 571570 382360 355040 369890 486290 388370 271410 507090 389300 460730 357770 129030 322030 382250 392650 383090 434890 422700 565250 388360 380010 376990 481960 406370 287610 504340 371840 437830 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1019599999.9999999 6414 3513 6077 12088;12089;12090 9757;9758;9759 9758 3 9606 Homo sapiens 0.045285896460427466 EHVIEALRR Unmodified 1121.6305 0.63054046 3513 X1WI28;X5D2T3;P27635;F8W7C6;H7C123;X5D7P1;H7C2C5 RPL10 60S ribosomal protein L10 yes no 0 0 1 7.5 0.5 1 1 35.495 35.525 3 0.00010035 7509 20230619_1887_Aki_TMTPro18x_K_F7 140.75 27.912 156140 75467 143190 143090 168110 157390 162140 174010 193780 172910 155200 146520 204780 146110 134100 186830 171780 155680 143910 69793 146870 139070 172330 158400 164830 176510 194170 174040 163080 150010 203920 152990 139970 185210 163880 148260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 472140000 6415 3513 6078 12091;12092 9760;9761 9760 2 9606 Homo sapiens 0.07459041348738538 EHVNVVFIGHVDAGK Unmodified 1619.842 0.8419898 3455;2572 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6;H3BSV8;B4DQM6;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B no no 0 0 0 6.5 0.5 1 1 46.465 46.551 4 6.976E-14 11977 20230619_1887_Aki_TMTPro18x_K_F7 152.71 139.31 65441 26703 61675 70824 58041 54405 70634 63836 86048 82874 79784 87922 87676 75328 65128 96010 75974 93104 60293 24875 62957 67602 60861 56428 70950 65123 86551 82891 82524 88579 88173 79201 67402 95893 72705 88398 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 550990000 6416 3455;2572 6079 12093;12094 9762 9762 1 9606 Homo sapiens 0.05686248529150362 EHVVAASK Unmodified 839.45012 0.45011648 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 5.5 0.5 1 1 32.287 32.345 3 0.043572 6558 20230619_1885_Aki_TMTPro18x_K_F5 56.258 24.886 19303 9569.4 25512 23915 35982 31744 26207 32040 30395 17202 32726 28889 19687 22226 25609 12992 27661 23312 17852 8891.6 25534 23054 36209 31499 27144 32298 30750 18548 32875 28582 20823 22639 25978 13830 26416 22048 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13283000 6417 12 6080 12095;12096 9763 9763 1 9606 Homo sapiens 0.02396942691905224 EHYAELR Unmodified 916.44028 0.44028008 3842 Q9NUF9;Q13232 c371H6.2;NME3 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase 3 yes no 0 0 0 2.5 0.5 1 1 31.355 31.429 3 1.6081E-06 6258 20230619_1881_Aki_TMTPro18x_K_F2 197.65 145.96 62470 33245 60484 69667 83113 75952 79579 76959 114060 75080 97652 102850 101940 89846 82707 90605 101980 98575 57623 30777 61990 67373 84382 76324 81462 78526 113440 76911 101150 102710 103030 93121 85544 91476 97360 93555 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76256000 6418 3842 6081 12097;12098 9764;9765 9764 2 9606 Homo sapiens -0.02128245313485877 EHYVDLK Unmodified 902.44978 0.44978213 3490;1446 A0A384MTW7;P15531;P15531-2;E7ERL0;E5RHP0;Q32Q12;P22392-2;J3KPD9 NME1;NME1-NME2;NME2 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 0 0 4.43 1.29 2 2 2 1 40.714 40.777 2;3 0.0031522 9837 20230619_1883_Aki_TMTPro18x_K_F4 112.94 65.198 2797300 1128900 2392700 2728800 3033200 2452800 2852400 2813000 3800100 3432000 3983500 3588500 3882100 3233100 3039700 3899600 3753700 3584400 2575300 1049800 2474700 2617900 3090600 2509200 2915500 2866000 3823700 3440800 4069700 3626000 3925100 3381700 3149900 3888200 3583400 3408400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 11804000000 6419 1446;3490 6082 12099;12100;12101;12102;12103;12104;12105 9766;9767;9768;9769;9770 9767 5 9606 Homo sapiens -0.005344770279521072 EIAAVFQDNR Unmodified 1161.5778 0.57783619 2463 B4DEH0;Q7Z7H8;Q7Z7H8-2 MRPL10 39S ribosomal protein L10, mitochondrial yes no 0 0 0 4 0 1 51.565 51.592 2 0.00034527 14707 20230619_1883_Aki_TMTPro18x_K_F4 130.41 104.85 351570 278620 306520 339810 300450 337350 356740 322460 399190 434060 429170 403450 442920 410060 430060 493540 449860 427490 324680 255630 315250 338120 314240 341020 357720 333560 405680 431810 439410 411340 451230 426970 438990 490800 430070 406810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146060000 6420 2463 6083 12106 9771 9771 1 9606 Homo sapiens 0.0035103849527331477 EIADGLCLEVEGK Unmodified 1431.6915 0.69154532 986 A0A0P1J1R0;Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;E9PJF7;B4DKJ4;Q9UP43;B4DLD6 TPT1 Translationally-controlled tumor protein yes no 0 0 0 3 0 1 59.386 59.415 3 0.00089047 18172 20230619_1882_Aki_TMTPro18x_K_F3 96.059 66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6421 986 6084 12107 9772 9772 1 9606 Homo sapiens -0.007032792446580061 EIADYLAAGKDER Unmodified 1449.71 0.70997257 2078 P53990-4;P53990;P53990-2;A8K5S3;P53990-5;H3BMU1;P53990-3;B4DLP1;H3BUI0;B4DM80;H3BQF7;F5GXM3;B4DHF3;H3BRE2;H3BPP6 IST1 IST1 homolog yes no 0 0 1 4 0.816 1 1 1 51.789 51.844 3 8.4009E-07 14841 20230619_1883_Aki_TMTPro18x_K_F4 143.58 112.54 208940 189140 208100 219510 217840 234550 213110 224480 273110 307300 325180 316930 325140 270910 276570 358000 349390 335780 193320 173360 211650 219430 225430 235890 217130 232210 277080 306370 331050 319830 329540 285560 286560 356870 333500 319210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251930000 6422 2078 6085 12108;12109;12110 9773 9773 1 9606 Homo sapiens 0.0031059872155765333 EIAEAYDVLSDPR Unmodified 1476.7096 0.70963822 3503 Q6FI51;Q6FHS4;P25685;M0QXK0;B4DKK9 DNAJB1 DnaJ homolog subfamily B member 1 yes no 0 0 0 2.5 0.5 1 1 58.993 59.007 2;3 7.4226E-08 18009 20230619_1882_Aki_TMTPro18x_K_F3 145.46 107.16 49191 36904 43192 45459 39590 50263 46724 51856 57320 56211 58668 52551 56084 50488 56226 57376 55770 59286 45416 33869 44341 45277 41681 50480 47048 52959 57843 56467 59980 53469 57342 52510 57156 57655 53389 56277 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40545000 6423 3503 6086 12111;12112 9774;9775;9776 9776 3 9606 Homo sapiens -0.009648209982970002 EIAEAYLGK Unmodified 992.51786 0.51786169 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;P11142-2;Q53HF2;E9PN89;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PPY6;E9PI65;A4D111;E9PK54 HSPA8;HEL-S-72p;LOC401308 Heat shock cognate 71 kDa protein no no 0 0 0 6.14 1.25 1 1 2 2 1 53.967 54.031 2;3 8.738E-05 15353 20230619_1887_Aki_TMTPro18x_K_F7 157.68 53.844 476870 388130 411580 465740 441100 498240 474470 483690 573370 569190 575740 540230 638930 505410 506170 671220 568510 550860 440440 356010 424300 464410 457130 501060 479580 497390 578780 569850 592970 548900 643530 531280 521400 664660 543230 524550 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 5789300000 6424 3430;2926 6087 12113;12114;12115;12116;12117;12118;12119 9777;9778;9779;9780 9780 4 9606 Homo sapiens 0.02130347832053303 EIAEELFTR Unmodified 1106.5608 0.56078914 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;Q01433-5;A0A7P0Z4H6;A0A590UJX5;A0A590UK85;A0A7P0T999;E9PJF6;A0A7P0TB79;E9PIJ1 AMPD2 AMP deaminase 2 yes no 0 0 0 2.5 0.5 1 1 57.087 57.112 2 1.0069E-05 17248 20230619_1882_Aki_TMTPro18x_K_F3 173.48 147.3 105620 100380 110740 132550 113370 139370 126640 126060 159630 136970 136360 145070 141920 141100 158830 173170 161260 191010 97798 92116 112260 131250 118050 140060 127930 130030 159780 138170 141360 146810 145640 147310 161440 174450 154470 181120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 358350000 6425 1570 6088 12120;12121 9781 9781 1 9606 Homo sapiens 0.011771178894605328 EIAENALGK Unmodified 943.49746 0.4974606 44 Q53F48;A0A024QZK8;P31942-2;P31942;P31942-3 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes no 0 0 0 5 0 1 47.529 47.606 3 0.00076853 12733 20230619_1885_Aki_TMTPro18x_K_F5 103.8 66.246 56543 46493 57159 55953 69186 64762 61116 65055 74550 68184 69693 68678 72461 69240 58900 77021 81649 68417 52290 42645 58167 55864 70621 64862 62523 66502 75006 68777 71832 69738 73301 71767 61482 76751 77809 65122 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43494000 6426 44 6089 12122 9782 9782 1 9606 Homo sapiens 0.023451771722420744 EIAQDFK Unmodified 849.42323 0.42323303 2210;3750 B4E380;K7EK07;B2R4P9;P84243;K7EMV3;A0A590UJJ6;B4DEB1;A8K4Y7;B2R6Y1;A0A1X8XL64;K7ES00;Q6TXQ4;Q71DI3;Q16695;P68431 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A Histone H3;Histone H3.3;Histone H3.2;Histone H3.1t;Histone H3.1 no no 0 0 0 4.57 2.06 1 2 2 1 3 2 2 1 47.956 48.023 2;3 0.0020874 13197 20230619_1882_Aki_TMTPro18x_K_F3 125.58 25.194 8136200 6677400 6835700 7339100 7819600 8844900 8493600 8020100 10891000 8243900 9335600 8949500 9560200 8109200 7826800 9034400 10222000 9791100 7513500 6119500 7070600 7378900 8071200 8812400 8595500 8257400 10888000 8348100 9656200 9027600 9670500 8442700 8127700 9103100 9754000 9293200 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 46926000000 6427 2210;3750 6090 12123;12124;12125;12126;12127;12128;12129;12130;12131;12132;12133;12134;12135;12136 9783;9784;9785;9786;9787;9788;9789;9790;9791;9792 9785 10 9606 Homo sapiens -0.007501659192826082 EIAQDFKTDLR Unmodified 1334.683 0.68302954 2210;3750 B4E380;K7EK07;B2R4P9;P84243;K7EMV3;A0A590UJJ6;B4DEB1;A8K4Y7;B2R6Y1;A0A1X8XL64;K7ES00;Q6TXQ4;Q71DI3;Q16695;P68431 H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A Histone H3;Histone H3.3;Histone H3.2;Histone H3.1t;Histone H3.1 no no 0 0 1 5 0.816 1 1 1 50.102 50.165 3 6.37E-05 13816 20230619_1885_Aki_TMTPro18x_K_F5 123.28 101.64 737920 1362300 1019100 692120 1225400 642780 892520 896990 567000 637480 824430 532850 443100 360770 1088500 326660 401110 372200 689840 1239900 1011900 756940 1240300 663930 910270 891740 606680 654020 816480 540500 493890 376280 1053400 333920 390220 353140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1466799999.9999998 6428 2210;3750 6091 12137;12138;12139 9793;9794 9793 2 9606 Homo sapiens 0.02907534901055442 EIAQEFKTDLR Unmodified 1348.6987 0.69867961 4066 Q5TEC6;A0A590UJL8 HIST2H3PS2 Histone H3 yes no 0 0 1 5 1.41 1 1 1 1 1 51.602 51.665 3 0.00028956 14729 20230619_1883_Aki_TMTPro18x_K_F4 110.08 87.065 3952300 3595700 3243100 3352500 3268000 3700600 3961400 4120300 4962400 3848300 3867800 3390500 4340300 3991000 3893800 3940600 3681800 3421900 3651700 3289600 3354900 3413900 3415000 3727400 3984300 4171600 4952000 3892800 4037300 3485500 4395400 4092800 3955800 3932900 3523000 3256600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 18428000000 6429 4066 6092 12140;12141;12142;12143;12144 9795;9796;9797;9798 9795 4 9606 Homo sapiens 0.038278214180763825 EIAVHIGDRDNAVR Unmodified 1563.8118 0.8117523 3873 Q14008-2;Q14008;Q14008-3;Q8IYN5 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 1 4.5 0.5 1 1 38.053 38.12 4 1.3789E-08 8769 20230619_1883_Aki_TMTPro18x_K_F4 130.24 97.502 92556 71618 101650 107580 151110 120440 105260 131410 128550 139900 159000 154000 129920 128680 136180 132990 172050 140880 85624 65866 103210 105830 151460 121150 109620 133620 130940 141300 160400 154820 133970 133720 140310 134050 164060 133840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161220000 6430 3873 6093 12145;12146 9799 9799 1 9606 Homo sapiens 0.052398898639921754 EIAVTVK Unmodified 758.4538 0.45380487 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 6.5 0.5 1 1 46.804 46.889 3 0.011112 12139 20230619_1887_Aki_TMTPro18x_K_F7 91.041 20.774 299600 195120 255640 290070 283040 279940 296190 279080 372090 336140 368010 375360 399670 327050 279590 362340 442990 400870 276350 179560 263920 284890 292150 283840 300190 286820 374530 337950 379020 377590 401270 340920 295860 365480 421980 380490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 311020000 6431 4005 6094 12147;12148 9800;9801 9801 2 9606 Homo sapiens 0.06491612465754315 EICCYSISCK Unmodified 1318.5356 0.53557872 559 A0A024R977;Q96BM9;B4DQT8;B4E1J8;Q9NVJ2 ARL8A;ARL8B ADP-ribosylation factor-like protein 8A;ADP-ribosylation factor-like protein 8B yes no 0 0 0 7.33 0.471 2 1 48.908 48.988 2;3 0.00031791 13134 20230619_1887_Aki_TMTPro18x_K_F7 149.72 111.43 163680 121630 153270 157000 180850 191960 163170 171070 208200 176720 180350 182500 176670 160870 181520 186560 189880 202470 151180 111680 156970 156090 185240 190980 166960 176320 208410 178560 186230 184280 180750 168000 184990 187950 181680 192090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 473440000 6432 559 6095 12149;12150;12151 9802;9803 9802 2 9606 Homo sapiens -0.11094764291283354 EICELTGIDQSVLER Unmodified 1760.8615 0.86146419 2174 E9PDF6;B0I1S9;O43795-2;O43795 MYO1B Unconventional myosin-Ib yes no 0 0 0 3 0 1 60.985 61.014 3 1.1571000000000002E-25 18819 20230619_1882_Aki_TMTPro18x_K_F3 236.42 199.57 74565 55869 73231 79451 70307 76535 80169 83061 93235 82987 78317 76500 95710 75435 88273 100470 88989 91784 68902 51355 74494 78248 73530 77745 80678 84401 93656 83694 81817 77975 96743 79197 90001 100040 85157 87259 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41484000 6433 2174 6096 12152 9804;9805 9804 2 9606 Homo sapiens 0.01146791967084937 EICQLLN Unmodified 888.4375 0.43750288 2096 B3KM89;A8K6V0;O94855;O94855-2;E9PDM8 SEC24D Protein transport protein Sec24D yes no 0 0 0 4 0 1 58.951 58.953 2 0.063545 17886 20230619_1883_Aki_TMTPro18x_K_F4 74.415 55.633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6434 2096 6097 12153 9806 9806 1 9606 Homo sapiens -0.011178367626371255 EICSLFGEAPQNLSQTQR Unmodified 2076.9899 0.9898526 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J583;A0A994J7K1 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 0 7 0 1 59.366 59.414 3 2.166E-16 17561 20230619_1887_Aki_TMTPro18x_K_F7 139.08 129.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6435 1867 6098 12154 9807 9807 1 9606 Homo sapiens -0.0055627278975407535 EICWNLQNIR Unmodified 1344.6609 0.66085431 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1 SRRT Serrate RNA effector molecule homolog yes no 0 0 0 4.5 3.5 1 1 56.989 57.015 2 1.6582E-06 17246 20230619_1880_Aki_TMTPro18x_K_F1 170.05 105.78 189060 158890 167870 191370 179490 215520 197860 201970 232180 147960 137350 120650 142900 130590 169070 163870 149070 129290 174690 145730 172630 190900 186240 215740 199450 205810 230580 151790 145610 124230 147010 136070 170330 162250 142680 123240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181820000 6436 4464 6099 12155;12156 9808;9809 9808 2 9606 Homo sapiens 0.002310319516027448 EIDDEANSYFQR Unmodified 1485.6372 0.63720156 1957 A5YKK6;A5YKK6-2;A5YKK6-3;A5YKK6-4;B3KPW6;H3BMH0;H3BR89 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 1 0 1 49.702 49.702 2 2.7528E-31 14244 20230619_1880_Aki_TMTPro18x_K_F1 279.62 238.18 35064 28260 27095 33761 28030 35858 31450 33487 37587 40865 43610 38333 38560 37479 37802 44751 41125 45114 32359 25921 28246 33664 29201 36038 31713 34566 38192 40828 44203 39026 39510 39058 38678 44854 39343 42831 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32706000 6437 1957 6100 12157 9810 9810 1 9606 Homo sapiens -0.086191550718695 EIDDSVLGQTGPYR Unmodified 1548.742 0.74200098 3189 M0QXU7;Q9UPE4;Q53G69;O43615 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 yes no 0 0 0 4 0.816 1 1 1 52.066 52.12 2 1.539E-36 15100 20230619_1882_Aki_TMTPro18x_K_F3 331.73 233.21 66531 53154 57266 71414 72207 72856 74467 75139 82058 85857 83483 96214 94307 77668 85411 88659 88559 103400 61439 48816 59250 70614 73850 73624 75181 76898 83282 86487 86153 96512 95462 81340 87203 89734 84805 97995 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115020000 6438 3189 6101 12158;12159;12160 9811;9812 9811 2 9606 Homo sapiens -0.010420335952858295 EIDDTYIEDAADVDAR Unmodified 1809.7905 0.79046732 2446 Q99459;B3KY60;B4DSH1 CDC5L Cell division cycle 5-like protein yes no 0 0 0 1 0 1 56.564 56.564 2 6.5703E-14 17086 20230619_1880_Aki_TMTPro18x_K_F1 207.66 183.67 22028 14892 19588 26808 18480 32497 25688 24971 29844 35973 27723 33188 38102 33696 27010 35176 33170 41776 20328 13737 20148 26129 19582 32206 25604 26324 30134 35685 29026 33799 38044 34832 28048 35670 31737 39578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25414000 6439 2446 6102 12161 9813 9813 1 9606 Homo sapiens -0.08203629536706103 EIDGGLETLR Unmodified 1101.5666 0.5666028 3563 P38117-2;P38117;M0QY67 ETFB Electron transfer flavoprotein subunit beta yes no 0 0 0 2 0 1 49.16 49.225 2 2.0598E-05 14083 20230619_1881_Aki_TMTPro18x_K_F2 160.16 96.684 385630 335890 342550 361300 417540 461050 491050 449760 599360 372000 433260 452480 442450 381490 401860 412170 400560 492250 356400 307710 352900 364250 429960 458460 493800 458240 596970 383030 452860 453330 449410 397540 409370 418170 383900 466360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 441870000 6440 3563 6103 12162 9814 9814 1 9606 Homo sapiens 0.01988216401127829 EIDMLLK Unmodified 860.46774 0.46774038 2235 B4DKX4;B2R6E2;Q53EL6-2;Q53EL6 PDCD4 Programmed cell death protein 4 yes no 0 0 0 6 0 1 59.927 59.989 3 0.053342 18113 20230619_1886_Aki_TMTPro18x_K_F6 60.788 19.286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6441 2235 6104 12163 9815 9815 1 9606 Homo sapiens 0.03192521902542467 EIEAEIQALR Unmodified 1170.6245 0.62445203 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 0 2.5 0.5 1 1 56.653 56.68 2 1.8276E-07 17251 20230619_1881_Aki_TMTPro18x_K_F2 191.67 135.95 283190 244290 244390 247100 165550 197770 144780 142890 194140 261990 360740 397720 275000 304470 364450 307010 364060 428710 261650 223680 250210 248790 177990 202670 149110 153240 201650 262430 358900 394210 288040 317040 368720 315480 348780 405670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 326190000 6442 1958 6105 12164;12165 9816;9817;9818 9816 3 9606 Homo sapiens 0.04596478326539 EIEDFDSLEALR Unmodified 1435.6831 0.68308912 162 A0A024R1U0;P46060;B4DY16;B0QYT5;B0QYT4 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 0 1.5 0.5 1 1 61.326 61.331 2 1.4589E-23 19014 20230619_1880_Aki_TMTPro18x_K_F1 247.54 185.76 249390 204340 228770 295330 212480 296180 268180 269630 330210 352280 299510 319750 361730 283610 292070 357420 348850 378450 230440 187800 234360 290570 224100 298590 269080 279540 331940 350610 311540 324720 363800 297860 301720 358950 333430 359120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 400290000 6443 162 6106 12166;12167 9819;9820 9819 2 9606 Homo sapiens -0.017325098896208146 EIEDPEDR Unmodified 1001.4302 0.4301689 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2;A0A7P0Z484;A0A7P0TAR9;Q16094;Q6ZP56 CANX Calnexin yes no 0 0 0 1 0 1 36.706 36.706 2 0.0011009 8653 20230619_1880_Aki_TMTPro18x_K_F1 148.99 102.32 179660 90901 178440 221870 227120 309170 243290 241530 344990 223540 296910 376170 282890 287310 283780 156180 343770 390160 165730 84412 182470 214050 233140 304000 247380 251000 343240 231810 306820 371340 289580 292410 291130 172590 328660 367920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 286380000 6444 1700 6107 12168 9821 9821 1 9606 Homo sapiens -0.07048897829372436 EIEELQSQAQALSQEGK Unmodified 1886.9222 0.92215019 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 4 1 1 1 60.207 60.236 3 3.328E-09 18510 20230619_1882_Aki_TMTPro18x_K_F3 128.11 112.17 43781 34981 37227 43908 37822 44776 47179 43842 51704 59173 48884 50260 56523 45599 48243 59388 49369 59436 40427 32102 38420 43613 39529 45186 47155 45269 52367 58699 50630 51253 57034 47945 49330 59425 47295 56415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50989000 6445 2337;3778;3779 6108 12169;12170 9822;9823 9822 2 9606 Homo sapiens 0.014166005510560353 EIEESKEPGVEDTEWSNTQTEEAIQTR Unmodified 3134.4164 0.41637591 1689 Q99986;A0A7P0TA65;A0A7P0T824;A0A7P0TA16;H0YJF7;A0A7P0TBE4;A8K245;A0A7P0T9E5;A0A7P0T838;A0A7P0TB15;A0A7P0T9T1;A0A7P0T952;A0A7P0Z4A4 VRK1 Serine/threonine-protein kinase VRK1 yes no 0 0 1 1 0 1 51.386 51.386 4 0.013644 14884 20230619_1880_Aki_TMTPro18x_K_F1 57.058 46.543 12324 8837.3 11595 11442 12821 13172 12381 14664 14241 12533 13593 14535 14567 11771 13883 13180 15345 17757 11381 8116.4 11855 11367 13205 13223 12575 14813 14375 12838 14028 14569 14801 12318 14206 13479 14685 16809 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105740000 6446 1689 6109 12171 9824 9824 1 9606 Homo sapiens -0.06545561911980258 EIEEYIHKPK Unmodified 1284.6714 0.67140222 3579 P42285;B4E3M6 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 0 1 6 0 1 46.481 46.565 4 0.0009708 12374 20230619_1886_Aki_TMTPro18x_K_F6 104.22 82.664 298380 238840 267650 285210 272560 332250 294010 304940 381860 279940 282880 266660 326450 255020 277880 327250 309220 291800 275630 219080 274650 284860 283770 331700 297900 312700 379850 284100 296650 271130 329400 267330 285410 325580 295440 277590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162220000 6447 3579 6110 12172 9825;9826 9825 2 9606 Homo sapiens 0.04045337877687416 EIEGEEIEIVLAKPPDK Unmodified 1908.0092 0.0091742879 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH35;B4DMD1;A0A286YEZ8;Q7Z334 HNRNPR;HNRPR;DKFZp686A13234;DKFZp686O0665 Heterogeneous nuclear ribonucleoprotein R yes no 0 0 1 5 0 1 60.933 60.983 3 4.8927E-09 18316 20230619_1885_Aki_TMTPro18x_K_F5 126.63 111.7 63205 48451 53580 60230 51398 69291 54729 59937 71823 63145 58498 71711 75076 67220 60128 94576 74113 93068 58347 44467 55245 59964 53807 69131 55536 61958 71683 63937 61451 72279 75436 70912 62377 94400 70907 88343 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212500000 6448 3254 6111 12173 9827 9827 1 9606 Homo sapiens 0.09149006772713619 EIEHNLSK Unmodified 968.49271 0.49270958 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7;Q32P42;A8K3I2;E7EN38;A0A494C122;E7ESD9;A0A494BZX5;A0A494C0Y7 RAD50 DNA repair protein RAD50 yes no 0 0 0 1 0 1 52.762 52.762 3 0.046976 15459 20230619_1880_Aki_TMTPro18x_K_F1 49.418 17.287 41469 46344 33406 38392 34097 39522 40103 43643 57550 47725 45862 32953 49592 43886 41210 45890 39725 33863 38371 42336 34649 39489 35590 40014 40620 44387 57151 47602 47667 34543 50106 45005 41994 45410 37982 32313 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26203000 6449 4309 6112 12174 9828 9828 1 9606 Homo sapiens 0.0072029302948521945 EIEIDIEPTDK Unmodified 1300.6398 0.63982732 2932 F8VSA6;E9PS38;S4R3E9;E9PL57;Q15843 NEDD8;NEDD8-MDP1 NEDD8 yes no 0 0 0 1.5 0.5 2 2 56.663 56.669 2;3 0.00021706 17309 20230619_1881_Aki_TMTPro18x_K_F2 135.86 113.12 74051 55525 60475 79877 51982 75450 68027 68824 88629 131380 131990 130490 136480 118970 100720 157110 146680 178530 68334 51045 62573 78550 55309 76426 68337 72449 91012 129340 133500 132140 137500 125150 105910 158270 140120 169230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290950000 6450 2932 6113 12175;12176;12177;12178 9829;9830;9831 9831 3 9606 Homo sapiens 0.001533003330905558 EIEIDIEPTDKVER Unmodified 1684.8519 0.85194536 2932 F8VSA6;E9PS38;S4R3E9;E9PL57;Q15843 NEDD8;NEDD8-MDP1 NEDD8 yes no 0 0 1 1.5 0.5 1 1 52.758 52.774 3 4.1012E-12 15633 20230619_1881_Aki_TMTPro18x_K_F2 189.09 164.68 300040 278840 318350 331970 319950 350270 349540 335050 302710 384980 363210 294880 354420 259860 405420 298740 274070 221470 277810 255620 321970 331180 332730 352530 349410 344680 313880 383450 369170 302300 363910 271420 403510 295700 263130 211360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 969430000 6451 2932 6114 12179;12180 9832 9832 1 9606 Homo sapiens 0.03691346953200991 EIELENDLK Unmodified 1101.5554 0.55536941 1356 Q15813-2;Q15813;A0A2R8Y5Q8;A0A2R8Y7E7;A0A2U3TZJ6;A0A2R8Y6Q1 TBCE Tubulin-specific chaperone E yes no 0 0 0 1.5 0.5 1 1 53.629 53.657 2;3 0.0030391 16044 20230619_1881_Aki_TMTPro18x_K_F2 114.86 66.575 197510 148980 180450 222630 190690 233030 214790 216170 244840 257150 252840 240660 263170 222330 217740 288220 264570 281610 182420 137020 185170 218760 198150 234330 216110 223120 248160 257190 259360 244530 266140 233460 225200 287990 252810 267480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104260000 6452 1356 6115 12181;12182 9833;9834 9834 2 9606 Homo sapiens 0.008653943069930392 EIELTHR Unmodified 896.47158 0.4715802 2241 B4DLS8;Q53GV6;B2R791;O43395;B4DM28;O43395-3 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes no 0 0 0 2.5 0.5 1 1 34.717 34.776 3 1.2445E-09 7481 20230619_1882_Aki_TMTPro18x_K_F3 204.1 165.86 203030 147380 170720 183600 232850 247340 229410 228530 336760 257980 266590 287060 313380 249810 217380 268100 293290 282020 187350 135300 177130 183270 237060 244850 234680 235480 334040 260240 278850 288720 313760 259960 227190 269780 279810 267760 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 114290000 6453 2241 6116 12183;12184 9835;9836;9837;9838 9837 4 9606 Homo sapiens 0.019203277206202074 EIENAAEEPR Unmodified 1156.536 0.53603095 4374 Q96K76-4 USP47 Ubiquitin carboxyl-terminal hydrolase 47 yes yes 0 0 0 1 0 1 37.03 37.03 2 0.00034877 8789 20230619_1880_Aki_TMTPro18x_K_F1 112.13 73.837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6454 4374 6117 12185 9839 9839 1 9606 Homo sapiens -0.035975619839064166 EIENEDMR Oxidation (M) 1050.4288 0.42878869 1901 A0RZB8;Q6URC4;O60610-2;O60610-3;O60610;A0A1E1ERW3;A0A2R8Y5N1 DIAPH1 Protein diaphanous homolog 1 yes no 0 1 0 1 0 1 31.66 31.66 2 0.073636 6607 20230619_1880_Aki_TMTPro18x_K_F1 64.42 59.261 17964 11637 18988 20173 24788 20492 17902 24806 24101 23071 30105 31420 28331 23755 26200 18310 35531 31076 16597 10730 19284 19668 25059 20800 18670 24980 24438 23651 30531 31235 28872 24486 27146 19230 33875 29398 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24267000 6455 1901 6118 12186 9840 9840 1216 1 9606 Homo sapiens -0.09440855189791364 EIERPFETYK Unmodified 1310.6507 0.65066678 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 1 5 0.816 1 1 1 46.626 46.694 3 0.015408 12350 20230619_1885_Aki_TMTPro18x_K_F5 65.695 43.667 133870 109100 124390 133040 99551 103140 129620 119770 137500 162120 177430 124010 168130 137750 119280 161340 153600 129610 123710 100080 126820 132040 106130 107000 129250 122400 141270 160390 179320 128280 169520 142910 124270 159870 146470 123530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108840000 6456 3588 6119 12187;12188;12189 9841 9841 1 9606 Homo sapiens 0.0077674749804828025 EIESEIDSEEELINK Unmodified 1775.8313 0.8312695 3892 Q4ZG57;Q14566 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 1 0 1 61.336 61.336 3 6.0795E-06 19011 20230619_1880_Aki_TMTPro18x_K_F1 116.51 104.24 33768 27339 32903 35052 25091 32002 30311 36536 35378 35318 37982 34624 33177 29551 33665 32774 33744 35911 31215 25094 33393 34731 26863 32682 30453 36968 35851 35725 38615 35016 34040 30822 34226 33065 32301 34067 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157350000 6457 3892 6120 12190 9842 9842 1 9606 Homo sapiens -0.025612882170435114 EIESSPQYR Unmodified 1107.5197 0.51965261 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;A0A024QZ91;A0A024QZC0;Q8WWM7-7;H3BSK9 ATXN2L Ataxin-2-like protein yes no 0 0 0 2.5 0.5 1 1 36.573 36.629 2 5.3419E-05 8313 20230619_1881_Aki_TMTPro18x_K_F2 163.2 130.88 133030 88746 110860 132500 137360 156210 143570 139200 193580 150230 167240 173710 168150 141520 149580 157790 201840 183530 122690 81664 115010 130430 140920 155700 145870 143700 193180 152050 172890 174150 170760 147940 155350 159730 192490 174110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159170000 6458 4285 6121 12191;12192 9843 9843 1 9606 Homo sapiens -0.02980643149999196 EIEVGGGRK Unmodified 943.50869 0.50869399 3703 P62081;B5MCP9 RPS7 40S ribosomal protein S7 yes no 0 0 1 5.5 0.5 1 1 36.233 36.309 3 0.0013603 7988 20230619_1885_Aki_TMTPro18x_K_F5 92.051 42.091 408170 181260 476630 459070 681980 602510 481920 622820 547380 396970 640520 619070 518960 508200 532380 234210 680410 547460 376870 168590 481190 442250 685470 598570 500120 628390 556950 420080 647330 614320 534640 513420 547520 258410 648660 517140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1038699999.9999999 6459 3703 6122 12193;12194 9844 9844 1 9606 Homo sapiens 0.03467999266399602 EIEVLER Unmodified 886.476 0.47599688 174 A0A024R207;B2RCL4;A0A024R1Y6;O75781-2;O75781;B7Z649;B3KMX3 PALM Paralemmin-1 yes no 0 0 0 1 0 1 46.243 46.243 2 0.026029 12825 20230619_1880_Aki_TMTPro18x_K_F1 97.093 4.9064 82030 65121 72452 95553 75572 76953 88022 82257 104840 86465 104530 94054 101860 78593 90502 97305 106270 104270 75763 59867 74578 93697 78574 79344 88532 83850 105750 87418 107060 94675 103460 82617 93134 97851 101510 98968 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90042000 6460 174 6123 12195 9845 9845 1 9606 Homo sapiens 0.028217921435384596 EIEVLNK Unmodified 843.47018 0.47018322 3129 J3KQ32;Q9NTK5;Q53SQ6;Q9NTK5-2;B4DK14;Q9NTK5-3;C9JCJ9 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 0 4.5 0.5 1 1 49.715 49.771 2 0.01296 13873 20230619_1883_Aki_TMTPro18x_K_F4 114.6 23.561 1323500 1121600 1176700 1350200 1274700 1455300 1249400 1280800 1864600 1620900 1825500 1867100 1974900 1568200 1288800 2056800 2039500 2008800 1222900 1028700 1210000 1345900 1317600 1459700 1280400 1329800 1862500 1628200 1880300 1874600 1978200 1653600 1368300 2054000 1943900 1908600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 331890000 6461 3129 6124 12196;12197 9846 9846 1 9606 Homo sapiens 0.04218693631867154 EIEVPDQYGTIR Unmodified 1418.7042 0.70415892 4548 Q9HC35;B5MBZ0;Q9HC35-2 EML4 Echinoderm microtubule-associated protein-like 4 yes no 0 0 0 2 0 1 51.313 51.358 2 2.3649E-05 15038 20230619_1881_Aki_TMTPro18x_K_F2 162 113.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6462 4548 6125 12198 9847 9847 1 9606 Homo sapiens 0.011555002098930345 EIFDIAFPDEQAEALAVER Unmodified 2162.0532 0.053164368 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 1.5 0.5 1 1 64.453 64.457 3 5.9949E-16 20585 20230619_1881_Aki_TMTPro18x_K_F2 169.28 152.06 19826 15058 18227 20302 17458 24419 21194 22667 25913 25302 25701 30860 32967 29954 25257 33407 29090 37071 18312 13833 18657 20120 18346 24322 21303 23343 26131 25605 26726 31039 33065 31105 26078 33696 27851 35142 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34393000 6463 2417 6126 12199;12200 9848 9848 1 9606 Homo sapiens 0.018619911991208937 EIFEQPESVVNTMR Unmodified 1677.8032 0.80322103 3806 Q06210-2;Q06210;A0A6I8PRN4;A0A6I8PTT9 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 0 3.5 0.5 1 1 57.729 57.747 3 0.00077591 17370 20230619_1883_Aki_TMTPro18x_K_F4 84.759 71.097 110180 87946 100780 107090 93368 117730 109530 111300 128950 115150 108760 112190 127480 109060 117130 134790 123330 129120 101790 80685 103100 106730 98164 118060 110110 114250 129470 116120 113390 113950 129040 113960 119730 134670 117980 122680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82225000 6464 3806 6127 12201;12202 9849;9850 9850 2 9606 Homo sapiens -0.008568448875166723 EIFGLYGQTTGK Unmodified 1312.6663 0.66631685 4052 Q5SQT9;Q9NR31;Q6FID4;B2R679;Q9NR31-2;H0Y5E8 SAR1A;SARA1 GTP-binding protein SAR1a yes no 0 0 0 4.5 3.5 1 1 58.384 58.407 2;3 0.00013598 17843 20230619_1880_Aki_TMTPro18x_K_F1 144.17 114.7 124860 101510 138750 143710 128170 159940 152070 141660 174260 169890 176650 180680 182130 158740 208580 178960 179170 219510 115560 93275 139690 141830 134730 160000 152640 146780 176360 170550 181480 182150 186950 165590 209850 181870 171990 207910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 397080000 6465 4052 6128 12203;12204 9851;9852 9851 2 9606 Homo sapiens 0.022490340150852717 EIFLSQPILLELEAPLK Unmodified 1952.1234 0.12341618 3705;3704;685 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;B4DJ75;B7ZB67;H0Y3Y6;C9JP48;B4E163;C9J9S3;A0A8V8TR83;F8WE71;P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;E9PMD7;B3KXM2;A0A024RBP2;F8W0W8;P36873;P36873-2;Q9UPN1;F8VYE8;F8VR82;A0A087WYY5 HEL-S-80p;PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 7.5 0.5 1 1 66.626 66.647 3 1.892E-18 20767 20230619_1887_Aki_TMTPro18x_K_F7 179.14 159.57 51261 37286 42790 50316 41933 51256 54723 52464 50809 55954 54000 56149 58487 44814 53235 68943 53965 64373 47302 34258 44217 49742 44005 51764 54313 53618 52141 56342 55474 56631 59264 47894 54359 68583 51698 61152 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 60900000 6466 3705;3704;685 6129 12205;12206 9853;9854;9855 9853 3 9606 Homo sapiens 0.1854394132556081 EIFNFVLK Unmodified 1008.5644 0.56441796 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2.5 0.5 1 1 63.449 63.469 3 0.0058786 20177 20230619_1881_Aki_TMTPro18x_K_F2 88.294 49.937 126610 111700 121350 130740 116720 129570 143370 132300 148090 118780 120390 92290 110610 89764 134630 122240 119770 107410 117090 102400 123710 130490 122310 131190 143130 134650 149390 120020 124280 94957 114310 94424 135590 121530 114650 102220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 468580000 6467 3758 6130 12207;12208 9856;9857 9856 2 9606 Homo sapiens 0.06047832454009949 EIGDYIR Unmodified 864.43413 0.43413207 1807 O60832;A0A8Q3WLC8;A0A8Q3SIY6;A0A8Q3SIS9;A0A8Q3SJE8;A0A8Q3WLD1;A0A8Q3WLG7;A0A8Q3SIX2;C9IYT0;O60832-2;A0A8Q3WLE4;U5UA77;A0A8Q3WLW8;H7C2Q2;U5U7S7 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 0 0 0 3.5 0.5 1 1 46.96 47.021 2 0.011694 12803 20230619_1882_Aki_TMTPro18x_K_F3 116.3 53.012 358550 296460 337000 416530 358470 443890 459050 456720 489800 409980 524110 519890 494870 330830 478810 404280 504070 451400 331400 272360 345080 410960 373710 446810 457910 464550 498070 420100 534850 516370 504570 351760 488120 407990 481680 428430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 317110000 6468 1807 6131 12209;12210 9858;9859 9858 2 9606 Homo sapiens -0.0035076354498642104 EIGELTQLK Unmodified 1029.5706 0.57062555 2182 B0YJ73;Q15404;Q32Q10;Q15404-2 RSU1 Ras suppressor protein 1 yes no 0 0 0 6 0 1 55.481 55.557 3 0.0030661 16256 20230619_1886_Aki_TMTPro18x_K_F6 84.615 16.599 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6469 2182 6132 12211 9860 9860 1 9606 Homo sapiens 0.057023058948516336 EIGFINYYGMQR Oxidation (M) 1505.6973 0.6972994 2443 B3KY42;Q96PZ0;Q96PZ0-2;B3KRB2;E7EUH7 PUS7 Pseudouridylate synthase 7 homolog yes no 0 1 0 1 0 1 56.035 56.035 2 0.071266 16901 20230619_1880_Aki_TMTPro18x_K_F1 54.982 38.311 14187 10480 13936 14241 15782 15536 12742 15588 15321 19008 18059 17803 18340 14880 16811 20240 18357 19032 13108 9628.9 14201 14089 16155 15616 13120 16002 15597 18979 18409 18030 18631 15733 17226 20175 17553 18087 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27938000 6470 2443 6133 12212 9861 9861 1510 1 9606 Homo sapiens -0.03532135942350578 EIGGLTQVNK Unmodified 1057.5768 0.57677356 1061 A0A0S2Q0B1;O14497;O14497-2;H0Y488;A0A1B0GTU5;O14497-3;Q96TA9;Q4LE49 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A yes no 0 0 0 6.5 0.5 1 1 48.179 48.262 3 0.0013693 12736 20230619_1887_Aki_TMTPro18x_K_F7 78.655 18.116 63619 48477 61692 66181 67577 72992 65869 73619 83422 73406 83710 86493 80409 68637 71099 92514 93039 81402 58787 44536 62938 65460 69701 73296 67088 75142 83970 74599 85732 86639 81755 72618 73788 91902 88727 77477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278640000 6471 1061 6134 12213;12214 9862 9862 1 9606 Homo sapiens 0.05028824126384279 EIGISNPLHR Unmodified 1134.6146 0.61455605 1362 A0A2R8Y7R9;Q13136;Q13136-2;H0YDW2;Q59FZ5;H0YHJ4;A0A1B0GVT3;G3V200;H0YIJ4;H0YHK3;B7Z7Y5;Q4LE62;O75334-7;O75334-8;O75334-6;O75145-2;O75145;O75334-2;O75334-4;O75334-3;O75334;O75334-5 PPFIA1;PPFIA2;PPFIA2 variant protein;PPFIA3 Liprin-alpha-1;Liprin-alpha-2;Liprin-alpha-3 yes no 0 0 0 7.5 0.5 1 1 43.449 43.494 3 1.6089E-05 10903 20230619_1888_Aki_TMTPro18x_K_F8 145.23 111.27 25601 20669 21386 24853 27580 31659 33425 35174 31510 29601 29304 27765 33622 24824 25830 31710 32668 27954 23638 18959 22199 24848 28320 31570 33295 35522 32125 30150 30345 28187 33788 26082 26810 31529 31158 26608 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26786000 6472 1362 6135 12215;12216 9863 9863 1 9606 Homo sapiens 0.05263335111840206 EIGMWYAK Unmodified 996.47389 0.47388839 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 0 0 8 0 1 57.253 57.304 2 0.025976 16692 20230619_1888_Aki_TMTPro18x_K_F8 89.142 48.874 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6473 4503 6136 12217 9864 9864 1 9606 Homo sapiens -0.02448959865944289 EIGNIISDAMK Oxidation (M) 1205.5962 0.59618837 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;B7Z5E7;B7Z4F6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;B7Z532;Q53SE2;E7ESH4;E7EXB4 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 1 0 5.5 1.12 1 1 1 1 55.117 55.171 3 4.219E-05 15904 20230619_1885_Aki_TMTPro18x_K_F5 129.74 74.192 379870 297440 339860 399370 399150 381900 436250 409150 488440 359500 392900 363390 414690 320850 374410 470560 387640 433800 350850 273180 349780 394640 410540 388220 439140 414950 490430 366310 408380 367740 420460 340380 382730 468080 371080 412250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1211100000 6474 272 6137 12218;12219;12220;12221 9865;9866;9867 9866 164 3 9606 Homo sapiens 0.0016141235494160355 EIGNIISDAMK Unmodified 1189.6013 0.60127375 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;B7Z5E7;B7Z4F6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;B7Z532;Q53SE2;E7ESH4;E7EXB4 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 6.5 0.5 1 1 61.547 61.594 3 4.3964E-09 18486 20230619_1887_Aki_TMTPro18x_K_F7 177.47 124.68 3007900 2397000 2756400 3262400 2565300 3304200 3388000 3567900 3766400 3292700 2854300 2728400 3341500 2633600 2966300 3615100 3220700 3065200 2778900 2201600 2822200 3223300 2706100 3341900 3379800 3618700 3779000 3325800 2992200 2794000 3376400 2772400 3040500 3584400 3078000 2917700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2682000000 6475 272 6137 12222;12223 9868;9869 9869 2 9606 Homo sapiens 0.014057162175731719 EIGNIISDAMKK Unmodified 1317.6962 0.69623677 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;B7Z5E7;B7Z4F6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;B7Z532;Q53SE2;E7ESH4;E7EXB4 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 1 1.5 0.5 1 1 59.492 59.505 3 3.0845E-05 18259 20230619_1880_Aki_TMTPro18x_K_F1 119.88 102.08 171430 180730 184240 149990 192780 161300 193770 196940 173140 159790 155980 120190 161170 109850 189820 159380 137920 115140 158900 165130 185940 154480 199060 163370 194760 197660 176920 162210 160950 123660 165450 116370 189480 157010 132310 109910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147000000 6476 272 6138 12224;12225 9870;9871;9872 9870 3 9606 Homo sapiens 0.05009649688759055 EIGQSVDEVEK Unmodified 1231.5932 0.59321148 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 2 0.707 1 2 1 46.501 46.56 2;3 4.6342E-09 12844 20230619_1881_Aki_TMTPro18x_K_F2 214.26 115.25 128260 103220 118770 120710 146360 167200 163220 161770 201150 164350 184070 185520 190640 155950 158990 221890 212220 200560 118510 94659 121900 121110 150400 165400 164700 165650 201960 166670 189910 186500 192880 165300 165510 220530 202460 190770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 669420000 6477 2337;3778;3779 6139 12226;12227;12228;12229 9873;9874 9874 2 9606 Homo sapiens -0.013321394981858248 EIGSTMSGR Unmodified 936.43348 0.43348014 1418 A0A384ME24;O00422;O00422-2;H7BZW6 SAP18 Histone deacetylase complex subunit SAP18 yes no 0 0 0 4 0.816 1 1 1 36.078 36.142 2 0.0033795 7956 20230619_1885_Aki_TMTPro18x_K_F5 97.635 66.406 96731 67895 95475 104690 121680 131220 122850 116260 163130 118910 119250 118150 138530 107120 117420 114420 151830 119660 89355 62487 97550 102980 124380 130290 124970 119870 162060 120130 125230 119590 139750 111310 121630 115190 144720 113720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 185760000 6478 1418 6140 12230;12231;12232 9875;9876 9876 2 9606 Homo sapiens -0.03727926256351566 EIGYTHMK Oxidation (M) 993.45897 0.45896661 2664 Q75MT5;B5BUD2;P35250-2;P35250;A0A087WVY3 RFC2 Replication factor C subunit 2 yes no 0 1 0 6 0 1 35.345 35.398 3 0.0063683 7772 20230619_1886_Aki_TMTPro18x_K_F6 80.684 51.957 101940 62689 84998 92469 109980 115470 110090 104110 132660 102140 117450 99566 115780 95492 106300 99671 120360 107190 93983 57700 88173 91194 112290 114730 111650 107090 133160 103340 121020 101120 117760 98894 108990 100550 114940 101780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96723000 6479 2664 6141 12233 9877 9877 1611 1 9606 Homo sapiens -0.03802451733918133 EIGYTHMK Unmodified 977.46405 0.46405199 2664 Q75MT5;B5BUD2;P35250-2;P35250;A0A087WVY3 RFC2 Replication factor C subunit 2 yes no 0 0 0 6.5 0.5 1 1 39.938 40.015 3 0.02999 9246 20230619_1887_Aki_TMTPro18x_K_F7 63.076 45.017 223070 158380 202010 224220 230040 245010 244330 259500 303610 296970 289750 294510 332300 241590 252600 339100 325660 280080 205930 145610 207520 221250 237170 246470 247370 265020 305510 298010 299730 297350 333800 256200 262750 335650 310570 266810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 111270000 6480 2664 6141 12234;12235 9878;9879 9879 2 9606 Homo sapiens -0.02558147871309302 EIHDGLDFYYSSK Unmodified 1572.7096 0.70963822 2409 B3KT11;C9JA08;Q96D46;B3KMN5;B4DKU1;C9J0B9 NMD3 60S ribosomal export protein NMD3 yes no 0 0 0 4.5 0.5 1 1 53.333 53.379 3 0.015632 15249 20230619_1885_Aki_TMTPro18x_K_F5 62.042 45.298 27969 20099 37469 37745 34654 33713 37079 37344 40647 37096 41592 46647 45148 41264 38962 50242 54906 51902 25915 18547 37226 36596 36220 34466 37375 37909 41238 37794 42818 46747 45711 43199 40668 50403 52359 49290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86337000 6481 2409 6142 12236;12237 9880 9880 1 9606 Homo sapiens -0.05380820998288982 EIHKPGYLANDR Unmodified 1411.7208 0.72081203 2184 P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;Q05CU6;Q6PKD3;P35241-3;E9PNV3;A0A2R8Y5P0 RDX Radixin yes no 0 0 1 7.5 0.5 1 1 38.55 38.575 4 0.00073525 8631 20230619_1887_Aki_TMTPro18x_K_F7 95.981 68.774 59541 47012 53596 57224 58946 64891 62318 55249 63888 68743 70717 56365 72760 47369 67258 63639 63750 49723 54998 43132 55042 57047 60899 64824 62684 57485 65304 68372 72231 57516 73817 50077 68270 62933 60933 47426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 405810000 6482 2184 6143 12238;12239 9881 9881 1 9606 Homo sapiens 0.03142045886511369 EIHQDWANR Unmodified 1167.5421 0.54211939 4279 Q8WUW1;Q8WUW1-2 BRK1 Protein BRICK1 yes no 0 0 0 3.5 0.5 1 1 35.5 35.553 3 5.3205E-07 7802 20230619_1882_Aki_TMTPro18x_K_F3 189.38 171.94 87811 56604 73362 82531 98529 120390 94646 103600 133540 84825 89958 91694 97653 78111 83812 88213 117150 102670 80978 52080 76178 81660 100450 118400 96819 106430 131970 87050 94676 92326 98791 81603 87321 89281 111660 97415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148190000 6483 4279 6144 12240;12241 9882 9882 1 9606 Homo sapiens -0.03494998961741658 EIHQFNR Unmodified 942.46716 0.46716353 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 5 0.816 1 1 1 31.516 31.575 3 0.0014123 6230 20230619_1885_Aki_TMTPro18x_K_F5 135.87 111.01 100250 61107 89001 88407 108330 115000 125960 114450 153880 121790 127570 123380 133660 110250 106630 122120 147450 125550 92467 56234 91652 87377 111490 114230 126760 117140 154030 122820 132330 124740 134960 114810 111230 122690 140530 119300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 402000000 6484 2337;3778;3779 6145 12242;12243;12244 9883;9884 9883 2 9606 Homo sapiens -0.006371367022893537 EIHTVPDMGK Unmodified 1125.5488 0.54884425 1720 Q15257;Q15257-2;Q15257-3;A0A804CD06;A6PVN5;B4DZF8;Q15257-4;Q68CR8;B4DLX5;Q5T949;A6PVN6 PPP2R4;DKFZp781M17165 Serine/threonine-protein phosphatase 2A activator yes no 0 0 0 5 0 1 42.581 42.663 3 0.019145 10625 20230619_1885_Aki_TMTPro18x_K_F5 64.103 45.274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6485 1720 6146 12245 9885 9885 1 9606 Homo sapiens -0.008908221253477677 EIICEQAAIK Unmodified 1173.6064 0.60635913 4113 Q6NX51;Q96A65;B7Z321;B7Z689;B7Z502;B3KTF7;B7Z4J9 EXOC4 Exocyst complex component 4 yes no 0 0 0 4.5 0.5 1 1 49.861 49.917 3 0.0021602 13962 20230619_1883_Aki_TMTPro18x_K_F4 84.17 52.739 44385 35615 47483 48237 46565 48859 47838 43544 61491 48362 55640 50573 60932 46978 52621 65075 53889 54010 41060 32710 47961 47677 48466 49241 48582 45008 61595 48727 57551 51178 61592 49537 53795 64449 51549 51416 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80831000 6486 4113 6147 12246;12247 9886 9886 1 9606 Homo sapiens 0.026500200802047402 EIIDLVLDR Unmodified 1084.6128 0.61282471 2408;4144 P68363;B3KT06;A8JZY9;B3KPS3;F8VQQ4;F8VVB9;F8VRZ4;F8VS66;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;B4DQK4;Q8N532 TUBA1B;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 0 0 0 4 1.41 1 1 1 1 1 63.587 63.615 2 5.7748E-08 19834 20230619_1883_Aki_TMTPro18x_K_F4 195.88 128.72 1114700 782970 891990 1079500 734400 1132000 982960 984530 1278100 1423200 1373300 1551100 1646500 1459300 1229800 2137100 1403100 2472700 1028200 719650 923780 1065900 785600 1136300 986010 1027900 1290100 1418900 1417100 1566400 1652500 1544600 1273000 2152100 1348200 2341100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1854799999.9999998 6487 2408;4144 6148 12248;12249;12250;12251;12252 9887;9888;9889 9888 3 9606 Homo sapiens 0.07390281303219126 EIIEVLQK Unmodified 970.5699 0.56989727 3932 Q15397;B2RDG4 KIAA0020 Pumilio domain-containing protein KIAA0020 yes no 0 0 0 5.5 0.5 1 1 58.611 58.672 3 0.00022165 17540 20230619_1886_Aki_TMTPro18x_K_F6 134.3 41.642 62247 46628 53691 61764 54922 71603 65387 62797 73736 73223 71512 69067 90865 66273 61900 89713 75170 83796 57462 42827 55338 61236 57345 71419 65572 65045 74588 73334 74276 70254 90678 69745 64343 89356 71853 79621 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88887000 6488 3932 6149 12253;12254 9890 9890 1 9606 Homo sapiens 0.08343511245800528 EIIINAVR Unmodified 926.55492 0.5549159 2856 D6W4Z6;P31350;P31350-2;A0A7P0SBL1;A0A286YFD6;B3KS26;Q8N6S3 hCG_23833;RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes no 0 0 0 8 0 1 49.24 49.312 2 0.06991 13248 20230619_1888_Aki_TMTPro18x_K_F8 68.214 45.323 232300 175510 203560 234360 173320 243740 230760 216370 279440 279080 250210 237300 278400 214770 215220 301150 258890 234800 214480 161210 208980 231880 184510 244980 230810 224670 280850 277470 259160 242100 280130 226890 222840 297280 247110 223810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159290000 6489 2856 6150 12255 9891 9891 1 9606 Homo sapiens 0.08870064168468161 EIINQQR Unmodified 899.48248 0.48247924 511 A0A8Q3SHZ4;A0A494C1F2;A0A024R8B6;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A8Q3WLX1;Q7Z3C4 NUP214;DKFZp686J0330 Nuclear pore complex protein Nup214 yes no 0 0 0 3.5 0.5 1 1 34.8 34.856 2 0.0075423 7389 20230619_1883_Aki_TMTPro18x_K_F4 124.37 81.307 33345 17961 37592 43741 57263 61356 39683 55146 50891 36070 54625 59625 48629 45886 48463 27583 55349 50685 30800 16672 38158 42220 57447 60506 41425 56212 51302 38204 55639 58954 49842 46814 49542 29385 52859 47914 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35391000 6490 511 6151 12256;12257 9892 9892 1 9606 Homo sapiens 0.028717300948983393 EIIPTSEFINSK Unmodified 1376.7187 0.71874635 1635 Q14669;A0A6Q8PGG9;Q14669-3;Q14669-2;A0A6Q8PHK0;A0A994J569;A0A994J4J0;H7C1L9;C9JLD7;A0A994J755;A0A994J4J6;Q14669-4 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 0 0 0 6 0 1 58.85 58.915 3 0.03904 17667 20230619_1886_Aki_TMTPro18x_K_F6 56.205 38.473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6491 1635 6152 12258 9893 9893 1 9606 Homo sapiens 0.04545572358051686 EIISHDTR Unmodified 969.48796 0.48795855 311 P00387-3;P00387;P00387-2;A0A8J8YWN6;A0A8I5KR71;A0A024R4X0;A0A8I5KW26;A0A8I5QKX1;A0A8I5KYU1;A0A8I5QKT9;A0A8I5KPU0;B1AHF3;A0A8I5KVD2;A0A8I5QKL2 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form;NADH-cytochrome b5 reductase yes no 0 0 0 2.5 0.5 1 1 30.605 30.681 3 7.0652E-05 5977 20230619_1881_Aki_TMTPro18x_K_F2 168.27 119.7 48697 27663 58732 74963 107520 91529 73765 104160 82142 61355 89036 100120 67515 66900 78444 42707 88574 95570 45019 25727 59622 71929 106680 91540 76663 104300 83408 65439 90178 98670 70173 68836 79933 46384 84697 90187 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49820000 6492 311 6153 12259;12260 9894;9895 9894 2 9606 Homo sapiens 0.0019940888671499124 EIISNLAK Unmodified 886.51238 0.51238239 3309 O75533;Q7Z497 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 0 7.5 0.5 1 1 51.438 51.515 2 0.0046878 14191 20230619_1888_Aki_TMTPro18x_K_F8 127.46 29.005 400320 335770 372730 393560 419170 501170 448580 434810 549760 461360 494140 444290 467000 372600 459000 507970 515840 493750 370010 307880 381820 394120 433020 497040 453620 449460 551820 464550 508090 449680 477030 394000 470290 507330 492850 469200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 560570000 6493 3309 6154 12261;12262 9896 9896 1 9606 Homo sapiens 0.06458669040239329 EIIYTLK Unmodified 878.51132 0.51131975 1724 A0A804HK74;F2Z2B9;B3KRS1;A0A804HI27;A0A804HL95;A0A804HJQ4;A0A804HJS9;Q53EQ3;A0A804HJ08;A0A804HJH7;Q9BSJ2;Q9BSJ2-4;B4DS45;Q9BSJ2-3;B3KTU7 TUBGCP2 Gamma-tubulin complex component 2 yes no 0 0 0 8 0 1 55.58 55.642 2 0.0053195 16010 20230619_1888_Aki_TMTPro18x_K_F8 141.78 43.649 74849 65346 63708 76339 64995 72931 72463 71300 90824 82390 85172 85742 86740 67794 83220 96719 101880 102480 69154 59908 65739 76146 67675 73986 73195 73275 91244 82785 87727 86306 88298 72092 85789 96998 97298 97268 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11792000 6494 1724 6155 12263 9897 9897 1 9606 Homo sapiens 0.06720454671346943 EILAELTGR Unmodified 1000.5553 0.55530983 699 P08559-4;P08559-2;P08559;Q5JPU2;P08559-3;A0A024RBX9;Q53GE3;A5YPB6;Q5JPU0;Q5JPU1;Q5JPT9 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha yes no 0 0 0 5 0 1 59.035 59.089 2 0.00025249 17521 20230619_1885_Aki_TMTPro18x_K_F5 116.52 61.745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6495 699 6156 12264 9898 9898 1 9606 Homo sapiens 0.05505439097669296 EILDAFDK Unmodified 949.47566 0.47566253 58 Q53FJ5;A0A024QZQ2;Q59EN5;P07602;P07602-2;P07602-3;B4DEK5;B4DRB7;A0A0J9YXB8 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes no 0 0 0 3 0.816 1 1 1 59.901 59.916 2;3 0.0038513 18271 20230619_1883_Aki_TMTPro18x_K_F4 126.41 58.396 160280 128870 132120 178010 155010 216640 177820 174920 269790 189670 204350 302580 241730 261010 178580 343500 315030 416210 147980 118390 137250 176080 160420 215010 180680 182060 266790 194570 214950 300560 243130 274740 191180 347350 300800 394170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 508000000 6496 58 6157 12265;12266;12267 9899;9900 9900 2 9606 Homo sapiens -0.0010962757633024012 EILGTAQSVGCNVDGR Unmodified 1674.7995 0.79953264 3530 P30050;Q59FI9;P30050-2 RPL12 60S ribosomal protein L12 yes no 0 0 0 5 0.816 2 2 2 49.089 49.153 2;3 4.7369E-52 13362 20230619_1885_Aki_TMTPro18x_K_F5 295.86 199.53 264230 224920 252350 253010 241280 284850 282600 255840 328130 326930 293800 284520 328260 272910 287580 360510 331000 321470 244300 206150 257210 253710 252820 285000 283900 265320 330490 325390 304500 290450 332020 286550 295940 358470 316210 305780 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 10292000000 6497 3530 6158 12268;12269;12270;12271;12272;12273 9901;9902;9903 9902 3 9606 Homo sapiens -0.010875146613898323 EILINTLHK Unmodified 1079.6339 0.63389451 1924 B3KT81;A3KMH1-2;A3KMH1-3;A3KMH1 VWA8 von Willebrand factor A domain-containing protein 8 yes no 0 0 0 1 0 1 50.932 50.932 3 0.00021875 14753 20230619_1880_Aki_TMTPro18x_K_F1 112.13 75.705 30679 27078 35012 37506 34511 45280 43949 42278 54693 43824 48824 48325 53285 47211 44663 57900 60033 59476 28415 24867 35231 37111 36195 45097 44084 43442 54833 44377 50553 48851 53866 49294 46488 58059 57287 56476 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14662000 6498 1924 6159 12274 9904 9904 1 9606 Homo sapiens 0.09726291402739662 EILIPVFK Unmodified 957.5899 0.58990443 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 1.5 0.5 2 2 62.955 62.96 2;3 0.0024416 19950 20230619_1881_Aki_TMTPro18x_K_F2 126.67 53.452 1411500 1316600 1437500 1680000 1104400 1144600 1236600 1175800 1355400 1617900 1818500 1562200 1950800 1544100 1657800 1875900 1742900 1789900 1306500 1207800 1454200 1659500 1176400 1199400 1244100 1212300 1393500 1609400 1847800 1589100 1971700 1611500 1696900 1874400 1667100 1700800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1769899999.9999998 6499 161 6160 12275;12276;12277;12278 9905;9906;9907 9907 3 9606 Homo sapiens 0.10941306976428677 EILPFEK Unmodified 874.48002 0.48001963 4613 Q9NWH9;H7C3F4;A0A024R5U7;A0A024R5X3;Q9NWH9-3 SLTM SAFB-like transcription modulator yes no 0 0 0 4.5 0.5 1 1 56.829 56.863 2 0.019704 16626 20230619_1885_Aki_TMTPro18x_K_F5 109.86 20.313 98050 90914 87241 106870 108340 119470 105800 115690 140140 120410 110360 108790 123510 106460 111260 125340 125840 134240 90656 83334 89957 106770 110880 119780 107870 118530 139640 121140 115190 110910 125090 110930 114240 126100 120320 127370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41346000 6500 4613 6161 12279;12280 9908 9908 1 9606 Homo sapiens 0.03775881637238854 EILSEVER Unmodified 973.50803 0.50802529 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 2 0.816 1 1 1 47.691 47.741 2 1.1937E-06 13399 20230619_1880_Aki_TMTPro18x_K_F1 196.77 28.691 696540 597820 613590 696070 748390 818840 755920 743210 1003700 808220 876350 835050 931610 762860 807050 945050 971980 917580 643630 548080 632750 696480 767460 817090 769160 766230 1002900 814720 907110 844500 943160 799040 832690 944840 928010 872010 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5825200000 6501 2435 6162 12281;12282;12283 9909;9910;9911 9909 3 9606 Homo sapiens 0.020211598266769215 EILTCGR Unmodified 847.42219 0.42218717 563;3927 A0A024R9B5;B4DMM7;Q15291;B4DLF8;Q15291-2 RBBP5 Retinoblastoma-binding protein 5 no no 0 0 0 5.5 0.5 1 1 39.569 39.658 2 0.037414 9355 20230619_1885_Aki_TMTPro18x_K_F5 91.906 78.858 107560 74618 98712 105310 116340 123040 110650 114900 155370 109950 129280 125950 128950 106540 107870 122160 136990 114800 99292 68606 101300 104030 119360 122870 113270 117800 154550 111970 133790 126510 130640 111350 111740 122070 130640 109200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104920000 6502 563;3927 6163 12284;12285 9912 9912 1 9606 Homo sapiens -0.0076270355982615 EILVEESNVQR Unmodified 1314.6779 0.67794416 374 Q5U086;A0A024R625;P60510;H3BTA2;H3BV22;I3L4X0 PPP4C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 4 catalytic subunit yes no 0 0 0 1.5 0.5 1 1 46.122 46.161 2 2.1517E-17 12643 20230619_1881_Aki_TMTPro18x_K_F2 286.53 206.07 62619 53119 54220 65537 59693 66729 64916 63695 77254 79783 75164 79917 82357 71750 67338 80751 83885 88855 57851 48729 55930 65168 61753 67322 65527 65722 77965 79776 77549 80811 83139 74768 69725 81419 80135 84291 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116260000 6503 374 6164 12286;12287 9913 9913 1 9606 Homo sapiens 0.03319231038426551 EILVGDVGQTVDDPYATFVK Unmodified 2165.0892 0.089215523 3495 V9HWI5;P23528;G3V1A4;E9PK25;E9PP50;B4E112;E9PQB7;E9PLJ3;E9PS23 HEL-S-15;CFL1 Cofilin-1 yes no 0 0 0 4 1.73 1 1 2 2 2 1 1 63.265 63.291 2;3;4 1.296E-36 19705 20230619_1883_Aki_TMTPro18x_K_F4 223.5 208.72 1211100 1000800 1125300 1198500 942960 1370300 1256800 1197100 1384600 1719800 1615700 1589600 1785000 1631100 1410000 1976300 1649800 1813000 1119300 917910 1148500 1196400 1005100 1367900 1253300 1248900 1414200 1706000 1653700 1621400 1799400 1698800 1456900 1969700 1577300 1723100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 11565000000 6504 3495 6165 12288;12289;12290;12291;12292;12293;12294;12295;12296;12297 9914;9915;9916;9917 9915 4 9606 Homo sapiens 0.0532744837591963 EILWRPK Unmodified 940.54944 0.54943659 3409 P08243-2;P08243;P08243-3;B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 1 3 0 1 47.656 47.735 3 0.011995 13131 20230619_1882_Aki_TMTPro18x_K_F3 94.662 27.98 314530 216660 266120 238320 214530 232250 202150 197470 223840 357560 397890 505150 414310 288890 427380 359050 372250 521270 290180 198700 273310 238970 226720 234680 205580 208580 234270 356860 401570 498130 422310 309280 430990 368920 357730 492840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 392740000 6505 3409 6166 12298 9918 9918 1 9606 Homo sapiens 0.0767838537666421 EIMEHIR Unmodified 926.46439 0.46438634 1795 A0A8Q3SHU8;P82663;E7EPW2;P82663-2 MRPS25 28S ribosomal protein S25, mitochondrial yes no 0 0 0 4 0 1 38.055 38.098 3 0.0057367 8773 20230619_1883_Aki_TMTPro18x_K_F4 97.033 69.508 34271 30199 40328 40653 50678 55143 48497 45160 55810 51492 53812 58335 58684 45737 45623 50107 64594 52719 31751 27725 40624 40372 51743 54426 49241 46997 56370 51922 55535 58449 59108 47844 47686 50423 61537 50089 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36838000 6506 1795 6167 12299 9919 9919 1 9606 Homo sapiens -0.0017872815144528431 EIMLAAK Oxidation (M) 790.42588 0.42587556 1471;4101 P10606;A0A384NL93;Q6FHM4;Q6FHJ9 COX5B Cytochrome c oxidase subunit 5B, mitochondrial no no 0 1 0 6 0 1 46.805 46.889 3 0.019822 12524 20230619_1886_Aki_TMTPro18x_K_F6 74.415 36.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6507 1471;4101 6168 12300 9920 9920 976 1 9606 Homo sapiens 0.022279662140363143 EINSDQATQGNISSDR Unmodified 1733.7816 0.78163397 3001 G1UI16;Q29RF7;B3KMN2;Q96DB6 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 0 2 0 1 37.403 37.463 3 3.6025999999999997E-53 8666 20230619_1881_Aki_TMTPro18x_K_F2 249.71 246.22 31037 19827 29028 32703 39375 39993 34054 34357 42648 33773 39473 39748 45847 33881 39543 36481 45277 43722 28644 18271 29827 32036 39929 39748 34907 35475 42818 34367 40926 39883 46259 35313 40616 37035 43255 41456 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111020000 6508 3001 6169 12301 9921 9921 1 9606 Homo sapiens -0.05590558382527888 EINTNQEALKR Unmodified 1314.6892 0.68917755 1862 Q93050-3;Q93050;Q93050-1;A0A994J3Z0;K7EN36;K7ENA1;Q5CZH6;Q53ET5;Q53X12;A0A994J3Z9;A0A994J735;A0A994J6N3;A0A994J728;A0A994J4L1;K7EPG4;K7ERA6;A0A994J6N0;A0A994J4L9;A0A994J731;A0A994J4L6;K7EM24 ATP6V0A1;DKFZp686N0561 V-type proton ATPase 116 kDa subunit a isoform 1;V-type proton ATPase subunit a yes no 0 0 1 6 0 1 38.263 38.341 3 6.5143E-05 8840 20230619_1886_Aki_TMTPro18x_K_F6 129.34 87.234 46731 43582 49210 50633 55999 43484 62168 55063 54741 43678 48410 37250 40214 29975 62687 25606 31501 21671 43267 39944 49879 50491 57605 44839 62078 55176 55893 44551 49591 37870 42302 30948 61419 25716 30374 20661 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62829000 6509 1862 6170 12302 9922 9922 1 9606 Homo sapiens 0.04442053132538604 EIPSHVLSK Unmodified 1008.5604 0.56039521 479 E5RHG8;A0A024R7Y5;Q15369;Q15369-2;A0A8I5KYG1;A0A8J9AD82 TCEB1 Transcription elongation factor B polypeptide 1 yes no 0 0 0 7.5 0.5 1 1 43.666 43.71 3 5.9634E-05 10961 20230619_1888_Aki_TMTPro18x_K_F8 143.89 94.175 359040 330120 304580 345130 350670 379200 386820 358910 416550 408800 451650 475160 456960 375580 365790 482230 513040 482090 331830 302280 314880 347880 361620 380590 388780 369520 424070 412470 462040 475990 461930 396350 382320 482530 489240 458010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 976970000 6510 479 6171 12303;12304 9923;9924 9924 2 9606 Homo sapiens 0.05645742960280131 EIPVESIEEVSK Unmodified 1357.6977 0.69767655 3279 O60502-4;O60502;O60502-2;O60502-3;H7C3X0 MGEA5 Protein O-GlcNAcase yes no 0 0 0 2.5 0.5 1 1 56.616 56.643 3 6.9613E-05 17067 20230619_1882_Aki_TMTPro18x_K_F3 115.14 85.593 96704 73341 99318 100420 91604 97906 98782 101360 114600 96540 97374 105470 105190 82437 105920 114900 102000 110900 89398 67383 100550 99158 95935 99264 99709 103200 115130 98106 101140 105900 107100 87532 107530 114690 97693 105340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115730000 6511 3279 6172 12305;12306 9925;9926 9926 2 9606 Homo sapiens 0.03313562258517777 EIPYTFEDR Unmodified 1168.5401 0.5400537 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4;H0YIZ0;G3V2Y4 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 2.5 1.12 1 1 1 1 51.426 51.462 2 2.3949E-08 15062 20230619_1881_Aki_TMTPro18x_K_F2 209.19 126.19 356690 317350 333160 362100 403390 448890 421040 427570 544310 486320 509750 571270 556600 500230 580490 551570 564610 688360 329820 290860 341660 363200 414190 446900 427230 439770 546090 491080 527230 573480 567890 521120 588860 561190 541220 651910 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 790790000 6512 657 6173 12307;12308;12309;12310 9927;9928 9927 2 9606 Homo sapiens -0.03747472490204018 EIQAPASADIR Unmodified 1169.6041 0.60405094 3267 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 0 0 0 3.5 0.5 1 1 42.612 42.678 2 9.2987E-12 10759 20230619_1882_Aki_TMTPro18x_K_F3 195.8 155.37 104090 81783 98666 110310 116850 117510 111580 116350 135850 124190 140690 143060 149120 116920 132030 158090 166160 148510 96188 75116 101000 109130 119750 118270 113590 119150 137200 125680 144490 143550 151090 123650 136580 157590 158530 141220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103170000 6513 3267 6174 12311;12312 9929;9930 9929 2 9606 Homo sapiens 0.0260330766673178 EIQDSQVPLEK Unmodified 1284.6561 0.65614609 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 3.5 0.5 1 1 48.76 48.797 3 0.001674 13459 20230619_1883_Aki_TMTPro18x_K_F4 84.289 52.858 54473 40603 53921 56390 51983 57314 56791 63496 72593 69546 68231 67217 74502 61735 70129 74694 70781 70956 50338 37313 54804 55662 54301 58015 57497 64578 72898 69890 70480 68168 75618 64554 71449 74636 67717 67433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38269000 6514 2830 6175 12313;12314 9931;9932 9932 2 9606 Homo sapiens 0.02520426289856914 EIQEPDPTYEEK Unmodified 1476.662 0.66201933 2629 B7ZAX9;B4DZC0;O60264;Q4W5G3 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 1.33 0.471 2 1 46.763 46.79 2;3 4.1745E-07 13037 20230619_1880_Aki_TMTPro18x_K_F1 191.79 152.76 166060 144010 153670 153230 186750 215290 179720 194910 241590 204570 200720 187500 215110 184570 185070 232900 206850 212500 153510 131920 157640 154870 191380 212540 183530 200650 240960 205830 208360 191150 217700 193030 190190 231980 197740 202030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 771720000 6515 2629 6176 12315;12316;12317 9933;9934 9933 2 9606 Homo sapiens -0.05724519989098553 EIQEPLESVEVNQETFR Unmodified 2045.9906 0.99056411 2830 D3DVC4;P48681 NES Nestin yes no 0 0 0 1.5 0.5 1 1 57.271 57.279 2;3 1.0058999999999999E-37 17519 20230619_1881_Aki_TMTPro18x_K_F2 297.83 226.89 80382 54457 58974 65073 68094 76480 85431 97945 96178 90225 84029 94652 106610 73148 87460 122450 83137 83394 74083 49986 61878 65029 70541 76950 85461 98295 96912 91689 87841 95207 107050 78777 89232 119970 79589 79621 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 185790000 6516 2830 6177 12318;12319 9935;9936 9936 2 9606 Homo sapiens 0.009408451308672738 EIQGFFNIPVDNLR Unmodified 1660.8573 0.85730551 16 E7EPA1;B2R7R5;A0A024QYY3;O60256-3;O60256;C9K0K7;C9JDU5;C9JJS3;O60256-4;O60256-2;I3L0S1 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes no 0 0 0 8 0 1 63.495 63.518 3 0.0047782 19311 20230619_1888_Aki_TMTPro18x_K_F8 72.523 59.386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6517 16 6178 12320 9937 9937 1 9606 Homo sapiens 0.053311153263621236 EIQMLAR Unmodified 859.45857 0.45857268 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;Q5S4N1;B4E132;B4E010 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 6.5 0.5 1 1 45.756 45.843 2 0.011039 12037 20230619_1886_Aki_TMTPro18x_K_F6 117.18 41.933 317570 255720 272750 279840 312780 350940 317400 309350 416620 327010 298370 317500 342110 276890 293830 392310 377380 269020 293280 234360 281450 281650 322180 348590 322710 319350 414000 329490 313700 321460 345560 292920 304750 385230 359520 257220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 318700000 6518 1018 6179 12321;12322 9938 9938 1 9606 Homo sapiens 0.02322173336870037 EIQNLIK Unmodified 856.50182 0.5018177 4332 Q96CN7 ISOC1 Isochorismatase domain-containing protein 1 yes yes 0 0 0 7.5 0.5 1 1 52.302 52.376 2;3 0.007949 14582 20230619_1888_Aki_TMTPro18x_K_F8 98.418 23.229 517570 445750 452110 572190 691000 814010 652120 642300 859030 752010 812600 834720 808760 767430 704400 869550 342630 977500 478240 409050 469170 570220 698710 800610 665820 670840 861360 757160 835740 841400 820520 799030 699410 877710 335720 924960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 826680000 6519 4332 6180 12323;12324 9939;9940 9940 2 9606 Homo sapiens 0.06782686385804482 EIQPGAFR Unmodified 916.47667 0.47666558 4302 Q92626;C9J4I9;H7C1W1;Q92626-2 PXDN Peroxidasin homolog yes no 0 0 0 5 0 1 42.805 42.888 2 0.059713 10722 20230619_1885_Aki_TMTPro18x_K_F5 66.682 10.671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6520 4302 6181 12325 9941 9941 1 9606 Homo sapiens 0.015086315832377295 EIQSSNLETAMSVIGDR Unmodified 1848.8887 0.88874158 350 A0A024R5Q1;Q9NX55 hCG_2003792;HYPK Huntingtin-interacting protein K yes no 0 0 0 4.5 0.5 1 1 60.665 60.691 3 4.9854E-48 18182 20230619_1885_Aki_TMTPro18x_K_F5 210.2 196.57 32043 25216 31659 31734 30417 32241 34446 36538 34033 43170 37894 37788 40310 31640 36867 43582 40201 45098 29619 23144 32173 31530 31782 32666 34504 37194 34904 43079 38807 38394 40883 33495 37773 43665 38465 42801 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96395000 6521 350 6182 12326;12327 9942 9942 1 9606 Homo sapiens -0.0017472449251272337 EIQSSNLETAMSVIGDRR Unmodified 2004.9899 0.9898526 350 A0A024R5Q1;Q9NX55 hCG_2003792;HYPK Huntingtin-interacting protein K yes no 0 0 1 6.5 0.5 1 1 55.193 55.262 3 4.8449E-85 15836 20230619_1887_Aki_TMTPro18x_K_F7 340.75 297.96 121860 104950 120410 123750 110860 124150 120060 128740 121720 156350 130910 137000 156670 127850 139430 164990 161790 165730 112710 96224 122300 123480 116150 125640 120670 131900 124520 155860 135070 139620 158250 134210 143460 165170 154610 157390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 946060000 6522 350 6183 12328;12329 9943;9944 9943 2 9606 Homo sapiens 0.027557272101830677 EIQSVYIR Unmodified 1006.5447 0.54474515 4058 Q8NBG9;Q5T171;Q5T170;Q9BRQ0 PYGO2 Pygopus homolog 2 yes no 0 0 0 6 0 1 45.792 45.878 2 0.0095993 12060 20230619_1886_Aki_TMTPro18x_K_F6 101.25 82.477 114390 82800 131410 142450 170440 169700 137330 142680 166640 135770 156190 163540 158430 142630 147330 131120 179430 172590 105820 76305 132690 139190 172910 168870 141340 147450 167640 138510 160890 163990 161180 147230 151680 134340 171320 163510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48545000 6523 4058 6184 12330 9945 9945 1 9606 Homo sapiens 0.0417345644324314 EIQTAVR Unmodified 815.45012 0.45011648 73;721 U3KQK0;A0A024QZZ7;A0A024RCJ9;A0A024RCL8;B2R4S9;B4DR52;I6L9F7;Q5QNW6-2;Q99879;Q99877;Q5QNW6;P62807;P58876;O60814;Q93079;Q99880;P57053;A8K9J7;Q0D2M2;A0A024RCJ2;Q16778;P33778;P23527;P06899 HIST1H2BN;HIST1H2BD;HIST1H2BK;HIST1H2BI;HIST1H2BM;HIST2H2BF;HIST1H2BC;HIST1H2BH;HIST1H2BL;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO Histone H2B;Histone H2B type 2-F;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-H;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J no no 0 0 0 4 2 1 1 1 1 1 1 1 35.371 35.424 2 0.0029915 7818 20230619_1881_Aki_TMTPro18x_K_F2 158.03 82.113 1409000 698840 1686200 1612200 2089800 2300900 1710900 2095300 1838200 1242500 2107800 2328900 1892700 1904500 2162900 722610 2216700 2117000 1301800 648340 1695300 1560500 2127900 2267500 1752800 2131000 1873200 1335000 2142800 2298300 1952900 1916000 2189300 828360 2119700 1996300 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 80790000000 6524 73;721 6185 12331;12332;12333;12334;12335;12336;12337 9946;9947;9948;9949;9950;9951 9947 6 9606 Homo sapiens 0.03500942691914588 EIQTLLSHK Unmodified 1067.5975 0.597509 2147 A8KA74;P78316;E9PFK5;P78316-2;Q96GC8 NOP14 Nucleolar protein 14 yes no 0 0 0 8 0 1 50.362 50.438 3 0.0015504 13706 20230619_1888_Aki_TMTPro18x_K_F8 81.09 44.406 175450 150640 145360 197560 185630 222970 201210 188450 216470 213300 161140 173750 223250 169200 189980 227800 220310 210570 162050 138280 151130 195860 190260 222680 202330 195610 217680 213090 170770 178000 224220 177910 195640 226890 210430 200220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 273250000 6525 2147 6186 12338 9952 9952 1 9606 Homo sapiens 0.06641414506043475 EIQTTTGNQQVLVR Unmodified 1585.8424 0.84238373 1120 A0A0S2Z583;Q8TC12;A0A0S2Z575;Q8TC12-2;Q8TC12-3 RDH11 Retinol dehydrogenase 11 yes no 0 0 0 6 0 1 43.319 43.413 3 4.2421E-05 10961 20230619_1886_Aki_TMTPro18x_K_F6 103.14 88.879 213520 145980 226690 229300 236710 286900 234330 270150 308380 284560 322010 336450 366610 259930 305420 347470 364530 346940 197330 134400 229370 225380 245310 285160 238850 277400 310480 288390 331720 336680 369520 275480 315120 347610 348080 329600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 248510000 6526 1120 6187 12339 9953 9953 1 9606 Homo sapiens 0.07289623458359529 EIQVIPLQRDDED Unmodified 1568.7682 0.76821574 489 A0A024R830;A0A140VJL8;P29218;P29218-3 IMPA1 Inositol monophosphatase 1 yes no 0 0 1 1.5 0.5 1 1 54.249 54.261 2 0.00021365 16110 20230619_1880_Aki_TMTPro18x_K_F1 125.23 81.457 83512 66972 81127 81716 69502 69142 76851 69370 76441 86212 89680 88692 92460 73111 89076 95275 92148 101860 77194 61443 82418 81170 73239 70919 77090 71362 78477 86274 91519 89407 94071 77142 90846 95732 88204 96642 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64566000 6527 489 6188 12340;12341 9954;9955 9954 2 9606 Homo sapiens 0.0065823557620205975 EIQVQHPAAK Unmodified 1119.6037 0.60365701 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;E9PRC8;Q5SZX6;Q5SZX9 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 6.5 1.12 1 1 1 1 36.755 36.809 3 0.0005767 7965 20230619_1887_Aki_TMTPro18x_K_F7 97.911 65.071 197570 131350 195320 204150 283870 281060 230120 246820 285540 222910 271160 249510 272750 229700 245640 193410 272660 247970 182460 120930 199940 201070 286250 277550 236880 253770 287030 227520 278780 251420 277020 235770 251430 198210 260450 235040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2989999999.9999995 6528 2435 6189 12342;12343;12344;12345 9956;9957;9958 9958 3 9606 Homo sapiens 0.04863932737566756 EIRDLYVNIQPVQEPK Unmodified 1940.0367 0.036726442 2123 A8K8K1;O00442;O00442-2 RTCA RNA 3'-terminal phosphate cyclase yes no 0 0 1 7 0 1 55.279 55.34 3 0.039288 15884 20230619_1887_Aki_TMTPro18x_K_F7 55.097 39.462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6529 2123 6190 12346 9959 9959 1 9606 Homo sapiens 0.10430954823641514 EIRDQGSCGSCWAFGAVEAISDR Unmodified 2570.1278 0.12781942 226 P07858;E9PHZ5;A0A024R374;A8K2H4;B4DL49;A0A7P0NGZ6;A0A7I2YQK9;A0A7I2V668;E9PQM1;E9PR21;E9PSG5;A0A7I2V4Z9;E9PLY3;A0A7I2V4S6;E9PKQ7;E9PNL5 CTSB Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes no 0 0 1 5.5 0.5 1 1 58.762 58.823 3 6.1464E-103 17609 20230619_1886_Aki_TMTPro18x_K_F6 340.49 314.56 56759 52511 47403 38824 59090 58246 79071 71288 78685 31891 32050 33952 39944 37326 63015 62081 46663 55193 52455 47963 49074 40694 60928 57782 78466 70858 78164 34479 35512 34597 41655 39675 62769 61596 44864 52465 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158150000 6530 226 6191 12347;12348 9960;9961 9961 2 9606 Homo sapiens -0.09443937323476348 EIRPTYAGSK Unmodified 1120.5877 0.58767259 3217 Q6IAV4;O14519-2;O14519;O75956;F5GZF0;E9PKR4 DOC-1R;CDK2AP1;CDK2AP2 Cyclin-dependent kinase 2-associated protein;Cyclin-dependent kinase 2-associated protein 1;Cyclin-dependent kinase 2-associated protein 2 yes no 0 0 1 8 0 1 37.696 37.682 3 0.036966 8558 20230619_1888_Aki_TMTPro18x_K_F8 57.52 29.439 263280 209640 336660 304870 484500 396360 388840 411110 334740 295810 371210 239870 254480 188040 475990 224660 258680 173090 243970 192710 337750 301290 487480 394410 396100 415660 345420 303330 373620 244770 273480 197710 466710 223160 249010 165260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121740000 6531 3217 6192 12349 9962 9962 1 9606 Homo sapiens 0.032202265006844755 EIRPVCR Unmodified 928.49127 0.49126979 724 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;Q59G92;B4DIJ6;B4DIZ8;H0YCC6 DDX39B;hCG_2005638 Spliceosome RNA helicase DDX39B yes no 0 0 1 6.83 1.07 1 1 2 2 29.996 30.054 2;3 0.0059851 5818 20230619_1886_Aki_TMTPro18x_K_F6 111.04 86.113 184590 136930 171290 184230 225000 210600 219650 225050 255860 182890 216230 184670 215460 176460 203990 184780 246660 191650 170490 125800 175960 182500 229080 211340 222850 227740 256780 187270 223480 187270 219390 182790 209850 186030 235210 182160 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1489199999.9999998 6532 724 6193 12350;12351;12352;12353;12354;12355 9963;9964;9965;9966 9964 4 9606 Homo sapiens 0.024163804597378657 EISEAFTSTGFDR Unmodified 1458.6627 0.66268803 4463 Q9BXK5;Q86T62;E9PDD6;A0A087WTL4;A0A087WX97;Q9BXK5-2 BCL2L13;DKFZp451F173 Bcl-2-like protein 13 yes no 0 0 0 3.5 0.5 1 1 55.282 55.293 2 3.1855E-07 16361 20230619_1883_Aki_TMTPro18x_K_F4 169.82 147.67 34605 33522 30821 33654 30912 36864 36951 38140 45539 34153 29598 32574 37277 33149 36241 36434 39040 42416 32006 30680 31648 34040 32305 37072 37163 38764 45253 34707 31483 33156 37774 34358 37025 36894 37350 40211 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16729000 6533 4463 6194 12356;12357 9967;9968 9968 2 9606 Homo sapiens -0.048296805494373984 EISEGDEVEVYSR Unmodified 1510.6787 0.67873203 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;C9JAJ4 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 0 1.5 0.5 1 1 46.289 46.289 2 1.157E-28 12814 20230619_1880_Aki_TMTPro18x_K_F1 266.12 234.7 184100 142210 180530 216740 187080 225050 226400 217710 259430 280870 263240 263090 303140 235930 220970 299360 285070 279680 170140 130810 184060 212730 195020 226650 226990 224630 262760 279910 271550 266960 304110 247710 230110 298480 272090 265870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 329740000 6534 1029 6195 12358;12359 9969;9970;9971 9969 3 9606 Homo sapiens -0.05618019103167171 EISFAYEVLSNPEKR Unmodified 1780.8996 0.89956426 409 A0A024R6S1;O60884;T2DN57;T2DPK5 DNAJA2 DnaJ homolog subfamily A member 2 yes no 0 0 1 7 0 1 59.866 59.912 3 7.5208E-11 17794 20230619_1887_Aki_TMTPro18x_K_F7 161.94 128.67 107990 110380 123310 123170 115120 114460 122050 111170 100600 154110 149450 108730 113520 81750 160030 77986 81636 60406 100130 101100 123840 123280 120190 116430 122090 114980 105850 151930 149290 111470 118960 85102 157130 77751 78720 57638 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28655000 6535 409 6196 12360 9972 9972 1 9606 Homo sapiens 0.040350459440787745 EISLWFKPEELVDYK Unmodified 1894.9717 0.97166657 3490 Q32Q12;P22392-2;Q6FHN3;P22392 NME1-NME2;NME2 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B yes no 0 0 1 7 0 1 63.513 63.546 4 0.00024369 19488 20230619_1887_Aki_TMTPro18x_K_F7 95.347 83.182 69292 50628 60021 59751 47452 56390 59457 56409 67588 70772 70660 68221 77066 64587 69716 90338 71055 72579 63958 46450 61551 59571 50669 57283 59527 58030 68541 70679 72618 69298 78092 68083 71213 89314 67982 69119 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189120000 6536 3490 6197 12361 9973 9973 1 9606 Homo sapiens 0.05997960297827376 EISNSDGTRPVGMLGK Unmodified 1659.825 0.82501911 4611 Q9NW64-2;Q9NW64;E5RJW4 RBM22 Pre-mRNA-splicing factor RBM22 yes no 0 0 1 7 0 1 45.953 46.041 3 0.0002921 11750 20230619_1887_Aki_TMTPro18x_K_F7 90.498 69.765 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6537 4611 6198 12362 9974 9974 1 9606 Homo sapiens 0.021499598610489556 EISPTER Unmodified 830.4134 0.41339662 3214 O00451;O00451-2;O00451-3;E5RGR6;B4DS89 GFRA2 GDNF family receptor alpha-2 yes no 0 0 0 1.5 0.5 1 1 32.989 33.018 2 0.0057599 7171 20230619_1880_Aki_TMTPro18x_K_F1 138.33 49.69 44539 26369 49271 54097 236450 255530 55137 69820 82772 44842 117660 196810 71720 119280 175140 30927 158450 221260 41149 24388 52436 54702 225980 238760 66997 83401 84117 51482 117780 189840 79947 120830 174560 43595 152200 207900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86457000 6538 3214 6199 12363;12364 9975;9976 9975 2 9606 Homo sapiens -0.008593539246589899 EISTEEQLR Unmodified 1103.5459 0.54586736 2274 P98170;B2R9R2 XIAP E3 ubiquitin-protein ligase XIAP yes no 0 0 0 1 0 1 39.671 39.671 2 0.003395 9936 20230619_1880_Aki_TMTPro18x_K_F1 95.502 71.347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6539 2274 6200 12365 9977 9977 1 9606 Homo sapiens -0.0017637397852467984 EISYENTQISR Unmodified 1338.6416 0.64155866 2154 A8KAK1;Q9NYU2-2;Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 3.5 0.5 1 1 42.642 42.697 2 8.1685E-12 10692 20230619_1883_Aki_TMTPro18x_K_F4 223.78 188.27 49210 35530 40638 48539 54356 60415 55832 52712 68803 61396 71740 79558 64800 59710 65487 74827 72310 75900 45404 32650 42254 48079 55456 60002 56587 54627 69439 62149 73219 79253 66426 63008 67011 74986 69144 72066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140950000 6540 2154 6201 12366;12367 9978 9978 1 9606 Homo sapiens -0.014216458582723135 EISYIMK Oxidation (M) 898.447 0.44700494 4784 yes no 0 1 0 4.5 3.2 2 1 1 2 54.919 54.955 2 0.031882 16390 20230619_1880_Aki_TMTPro18x_K_F1 89.903 29.104 + 1174700 755400 1059900 1230400 1047500 1259900 1422000 1209500 193170 1417500 1463500 1583600 2063800 1499000 1306600 1933700 1345300 1509400 1083800 696000 1087400 1203100 1096900 1269800 1375100 1245500 322120 1423600 1468900 1597800 2048500 1572400 1347600 1910800 1287900 1437600 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3030999999.9999995 6541 4784 6202 12368;12369;12370;12371;12372;12373 9979;9980 9979 2911 2 9606 Homo sapiens -0.0062806847711271985 EISYIMK Unmodified 882.45209 0.45209032 4784 yes no 0 0 0 1 0 1 58.877 58.877 2 0.022723 17984 20230619_1880_Aki_TMTPro18x_K_F1 101.52 9.2029 + 446000 287370 394890 440590 316100 491470 532290 472890 39176 590350 505250 640960 885550 902390 124360 931290 353120 604080 411470 264560 404790 432800 340330 492110 509370 487690 88939 590990 513240 657400 856330 922450 157100 914870 337390 576300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 698970000 6542 4784 6202 12374 9981 9981 1 9606 Homo sapiens 0.006162353854961111 EITALAPSTMK Oxidation (M) 1176.606 0.60602477 3112;3679;2695 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;A6NL76;Q7Z7J6;A0A804HKV3;Q13707;P63267-2;B4DUI8;B3KPP5;P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;Q96FU6;Q96DE1;A5GZ75;A4UCT3;F1BXA6;A0A2R8YFE2;Q9UE89;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;B3KUD3 ACTA1;ACTC1;ACTA2;ACTG2;ACTG1;ACTB;PS1TP5BP1 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 1 0 6.56 2.06 1 1 4 3 49.595 49.662 2;3 4.6513E-05 13538 20230619_1886_Aki_TMTPro18x_K_F6 128.01 105.37 811520 613850 699390 774290 883930 1041400 959130 903190 1097900 944260 894560 860060 1007000 800790 841570 1050600 971540 908440 749180 563500 723230 772070 906460 1029400 966480 933210 1102400 950040 931990 875330 1016100 841340 866980 1043200 927870 864580 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 39167000000 6543 2695;3112;3679 6203 12375;12376;12377;12378;12379;12380;12381;12382;12383 9982;9983;9984;9985;9986;9987;9988;9989;9990;9991 9983 1615 10 9606 Homo sapiens 0.024786003603367135 EITALAPSTMK Unmodified 1160.6111 0.61111015 3112;3679;2695 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;A6NL76;Q7Z7J6;A0A804HKV3;Q13707;P63267-2;B4DUI8;B3KPP5;P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;Q96FU6;Q96DE1;A5GZ75;A4UCT3;F1BXA6;A0A2R8YFE2;Q9UE89;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;B3KUD3 ACTA1;ACTC1;ACTA2;ACTG2;ACTG1;ACTB;PS1TP5BP1 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 0 0 4.17 2.54 1 1 1 1 1 1 53.25 53.291 3 6.3279E-06 14901 20230619_1888_Aki_TMTPro18x_K_F8 113.27 90.391 1010000 831010 902260 956820 1188800 1341500 1220300 1162500 1374700 1162700 1061900 965650 1388400 1021900 1030800 1194000 1076500 978160 933150 761910 930330 961020 1213500 1323200 1232700 1199600 1379500 1169900 1117600 991680 1388600 1062000 1057800 1184800 1028800 931710 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 40365000000 6544 2695;3112;3679 6203 12384;12385;12386;12387;12388;12389 9992;9993;9994;9995 9995 4 9606 Homo sapiens 0.03722904222968282 EITFLDAK Unmodified 935.4964 0.49639797 1616 Q27J81;Q27J81-2;A0A6Q8PHA2;A0A6Q8PH71;A0A6Q8PHG2;A0A6Q8PGN3;A0A6Q8PF44;A0A6Q8PH25;A0A6Q8PF29;A0A087X118;A0A6Q8PFW4;A0A6Q8PGC7;A0A0A0MQU1;A0A6Q8PH63;A0A6Q8PGU8;A0A6Q8PH59;A0A6Q8PFN5;A0A6Q8PFB9;A0A6Q8PGY8 INF2 Inverted formin-2 yes no 0 0 0 4.5 0.5 1 1 57.144 57.177 3 0.0038646 16746 20230619_1885_Aki_TMTPro18x_K_F5 84.498 43.068 30740 32160 29685 31217 26344 31857 29113 29063 35341 31214 32564 35192 31745 26938 30667 37293 34526 39108 28465 29419 30202 31633 27737 32117 29396 29951 35528 31557 33525 35267 32379 28608 31456 37388 33029 37109 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26877000 6545 1616 6204 12390;12391 9996 9996 1 9606 Homo sapiens 0.026069628033155823 EITSLHER Unmodified 983.50361 0.50360861 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 3 0 1 33.206 33.277 3 8.3582E-05 6887 20230619_1882_Aki_TMTPro18x_K_F3 167.23 124.36 23943 20016 26954 24945 35779 34266 29772 36373 29494 25904 31824 30611 26118 25520 32877 26290 32377 34642 22166 18364 27243 24920 36248 33998 30383 36702 30146 26874 32301 30701 27180 26529 33249 26895 30998 32806 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15854000 6546 3440 6205 12392 9997 9997 1 9606 Homo sapiens 0.01119695403770038 EITTEGQVQVLK Unmodified 1343.7296 0.72964538 4665 Q9UI26;Q9UI26-2;F8WDV0;B3KN03 IPO11 Importin-11 yes no 0 0 0 5 0 1 50.886 50.961 3 0.0021174 14171 20230619_1885_Aki_TMTPro18x_K_F5 76.255 56.149 134250 109910 120370 135920 117680 126320 131600 134460 143850 157240 156430 144160 179740 139600 123950 202940 179010 198480 124030 100850 123470 135010 122830 128670 132310 137420 146460 157270 160780 146940 180010 147580 130510 202400 170870 188490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71396000 6547 4665 6206 12393 9998 9998 1 9606 Homo sapiens 0.07152974732321127 EITTFEGCK Unmodified 1083.4907 0.49066067 430 A0A024R753;Q9NW13;A0A0S2Z5E5;C9JE21;C9JAA9;B4DJ90 RBM28 RNA-binding protein 28 yes no 0 0 0 4 0 1 48.601 48.639 3 0.0045384 13305 20230619_1883_Aki_TMTPro18x_K_F4 74.173 50.184 72751 54006 70088 71226 78131 85989 85745 79622 109200 115770 127700 152220 123180 125100 126900 154730 144470 153820 67211 49603 71554 70704 80760 85684 86729 82766 110680 116170 130130 151910 126190 131380 130100 154890 138130 146070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85456000 6548 430 6207 12394 9999 9999 1 9606 Homo sapiens -0.04774503770636329 EIVAEAER Unmodified 915.46616 0.46616048 406 A0A024R6Q1;P55010;Q6IBU0 EIF5 Eukaryotic translation initiation factor 5 yes no 0 0 0 1 0 1 39.117 39.117 2 0.019409 9673 20230619_1880_Aki_TMTPro18x_K_F1 89.542 50.244 190680 127950 149840 179980 180590 239680 181760 190070 330130 224930 263380 331850 295420 279690 201300 293450 356700 350500 175800 117650 156300 178130 185920 236530 187680 198540 324890 229020 275040 330070 296420 290820 215420 297590 339740 332330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285190000 6549 406 6208 12395 10000 10000 1 9606 Homo sapiens 0.005046041381433497 EIVHIQAGQCGNQIGTK Unmodified 1851.9261 0.92613014 2562;3176 B4DP54;Q9BUF5;K7ESQ3;K7EQT3;K7EJ64;K7ERA8;K7EJZ4;K7EL29;K7EN98;K7EPE5;K7ESM5 TUBB6 Tubulin beta-6 chain no no 0 0 0 7.5 0.5 1 1 44.708 44.765 3 7.096E-24 11220 20230619_1887_Aki_TMTPro18x_K_F7 210.57 192.77 182890 128510 158660 178030 151480 192980 184250 170550 204020 225350 205390 211730 254480 208090 196400 263430 255610 260170 168780 118120 163230 175840 159060 193390 184470 177290 206970 224410 212820 215460 255410 217760 204370 263440 244030 247130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 345520000 6550 2562;3176 6209 12396;12397 10001;10002 10001 2 9606 Homo sapiens 0.034244115637648065 EIVHLQAGQCGNQIGAK Unmodified 1821.9156 0.91556545 3748;3381;3201 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B4DNW1;M0R2T4;M0R2D3;P04350;B4DJ43;B4DFH6;M0QY85;M0R0X0;M0QY37;M0QX14;M0QZL7;M0QYM7;M0R278;M0R042 TUBB2C;TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 0 0 6.4 2.01 1 1 1 4 3 49.261 49.309 2;3;4 4.3923E-30 12262 20230619_1880_Aki_TMTPro18x_K_F1 227.63 0 1263800 956970 1110800 1198600 995860 1267700 1280400 1135700 1261700 1462400 1422300 1428500 1561800 1325500 1360600 1621000 1509300 1587800 1166900 878390 1140200 1191400 1052500 1273300 1273900 1178600 1293900 1459200 1457900 1448300 1580000 1386400 1396700 1621600 1443200 1508200 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 26289000000 6551 3748;3201;3381 6210 12398;12399;12400;12401;12402;12403;12404;12405;12406;12407 10003;10004;10005;10006;10007;10008;10009;10010 10003 8 9606 Homo sapiens 0.03748428909352697 EIVHTFK Unmodified 872.4756 0.47560295 962 A0A0A0MTB8;Q8NI36 WDR36 WD repeat-containing protein 36 yes no 0 0 0 7.5 0.5 1 1 42.721 42.76 3 0.0015921 10405 20230619_1887_Aki_TMTPro18x_K_F7 139.31 78.352 125300 94484 113890 127690 130360 135310 146030 134250 167930 168420 167910 172030 179230 144230 146050 205240 209830 181100 115710 86798 116980 126290 134490 136230 146960 138170 169890 168490 172770 173580 181010 152920 152940 203730 199950 172370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 177790000 6552 962 6211 12408;12409 10011;10012 10011 2 9606 Homo sapiens 0.03426417214348021 EIVLADVIDNDSWR Unmodified 1643.8155 0.81550028 3489 P22234;P22234-2;E9PBS1;B4DGX3;D6RF62 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 3 0.816 1 1 1 63.576 63.595 2;3 2.8662E-37 19835 20230619_1883_Aki_TMTPro18x_K_F4 296.52 258.43 116730 90887 113110 115850 97492 123460 103160 95555 128110 131960 136590 138210 142470 136010 138360 143580 146020 165360 107880 83430 114980 115020 102830 123600 104500 100580 129480 131660 140020 139930 145130 140750 141230 145370 139770 156760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 330490000 6553 3489 6212 12410;12411;12412 10013;10014;10015 10015 3 9606 Homo sapiens 0.019345148471757057 EIVNNIR Unmodified 856.47667 0.47666558 3433 P11388;P11388-2;P11388-3;P11388-4 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 5 0 1 39.753 39.843 2 0.026046 9430 20230619_1885_Aki_TMTPro18x_K_F5 97.071 39.969 255470 183450 254890 278090 335690 362650 289700 363370 353120 275320 340360 358740 291320 282790 315320 275260 333530 327150 236040 168780 260310 274050 341090 360140 296920 368550 355350 285530 347830 357770 300270 293660 320990 279820 318900 310210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184820000 6554 3433 6213 12413 10016 10016 1 9606 Homo sapiens 0.04268631583227034 EIVNNVR Unmodified 842.46102 0.46101552 1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;Q59H80;Q6W6M6 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 0 0 0 4 0 1 36.186 36.232 2 0.015923 8045 20230619_1883_Aki_TMTPro18x_K_F4 110.63 59.061 44679 31057 45941 46003 51596 51927 49315 51322 60675 50162 55977 56539 61275 50835 51845 40136 71615 61457 41284 28571 46640 45298 53057 52041 50218 52437 60960 50973 57881 56879 61932 52101 53900 41742 68259 58184 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23068000 6555 1843 6214 12414 10017 10017 1 9606 Homo sapiens 0.033483450661947245 EIVPVLVSTR Unmodified 1111.6601 0.66010926 2058 A8K4W5;Q59GW6;Q9BWD1;Q9BWD1-2 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes no 0 0 0 5.33 3.09 1 1 1 54.745 54.788 2 0.0041634 15581 20230619_1888_Aki_TMTPro18x_K_F8 92.239 74.726 500540 411230 433530 486710 350350 383070 413280 414560 450300 485550 478680 417050 528770 444600 439440 558130 488710 470910 462330 377130 444960 484070 372340 396110 414470 423430 458030 484800 491510 427820 533800 463690 451800 553850 466990 448260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 790390000 6556 2058 6215 12415;12416;12417 10018;10019 10019 2 9606 Homo sapiens 0.10874560574234238 EIVQDGDHMIIR Oxidation (M) 1440.7031 0.70311306 3420 P09455;A0A0A0MQT0;A0A0A0MTB9;H0YAK8;P09455-2;P09455-3 RBP1 Retinol-binding protein 1 yes no 0 1 0 2 0.816 1 1 1 40.299 40.343 3 3.8819E-10 9925 20230619_1881_Aki_TMTPro18x_K_F2 184.11 152.12 316170 253010 280480 290440 275240 255230 329730 343970 422280 310380 352100 346460 355220 304230 321150 377180 369150 383010 292040 231990 287830 289990 287600 262980 332150 344360 421700 316690 364620 348860 360910 319050 330130 378020 352830 363670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1780899999.9999998 6557 3420 6216 12418;12419;12420 10020;10021 10020 2038 2 9606 Homo sapiens 0.0003896256935149722 EIVQDGDHMIIR Unmodified 1424.7082 0.70819844 3420 P09455;A0A0A0MQT0;A0A0A0MTB9;H0YAK8;P09455-2;P09455-3 RBP1 Retinol-binding protein 1 yes no 0 0 0 3.5 0.5 1 1 45.732 45.792 3 1.0843E-24 12207 20230619_1882_Aki_TMTPro18x_K_F3 262.07 194.35 691430 531380 600030 593630 434330 494010 710730 683570 790930 651380 662030 717740 703630 594910 744190 735850 836480 882120 638400 487180 614710 593640 471980 511580 702980 684560 795450 662030 687760 721430 718930 625420 761060 745340 799760 836130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2433100000 6558 3420 6216 12421;12422 10022;10023 10022 2 9606 Homo sapiens 0.012832664319603282 EIVSGMK Oxidation (M) 778.38949 0.38949006 3634 V9HWE8;P52565;J3KTF8;J3QQX2;J3QW41;A0A0S2Z3D9;J3KRY1;P52565-2 HEL-S-47e;ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 0 1 0 5.2 0.748 1 2 2 39.749 39.829 2;3 0.014116 9422 20230619_1885_Aki_TMTPro18x_K_F5 79.451 42.357 223310 153070 202450 216900 259160 241570 243830 268620 309930 231310 279300 278560 265570 237370 265830 213270 308170 278410 206120 140750 208280 214110 264090 243060 248800 271470 310490 237300 287410 279190 271610 244960 272330 218560 294240 263860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 778900000 6559 3634 6217 12423;12424;12425;12426;12427 10024;10025 10025 2325 2 9606 Homo sapiens -0.0085691068268261 EIVSGMK Unmodified 762.39458 0.39457544 3634 V9HWE8;P52565;J3KTF8;J3QQX2;J3QW41;A0A0S2Z3D9;J3KRY1;P52565-2 HEL-S-47e;ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 0 0 0 6.5 0.5 1 1 45.35 45.436 2 0.007829 11462 20230619_1887_Aki_TMTPro18x_K_F7 128.57 55.527 1789500 1221300 1639500 1647600 1788600 1886100 1843800 1799600 2479200 2064700 2307900 2274300 2518200 2004300 2025200 1967600 2719800 2364200 1651800 1122400 1680100 1631900 1848300 1887200 1875300 1851600 2481600 2080000 2384300 2289600 2539700 2075700 2105700 2000500 2593100 2242600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1469699999.9999998 6560 3634 6217 12428;12429 10026;10027 10027 2 9606 Homo sapiens 0.003873931799262209 EIVTNFLAGFEA Unmodified 1309.6554 0.65541781 3504 V9HW26;P25705;P25705-2;P25705-3 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 6 1.41 1 1 1 1 1 67.435 67.463 2 9.6266E-06 21090 20230619_1887_Aki_TMTPro18x_K_F7 143.37 131.15 85338 64515 76279 80765 78477 86371 92023 91035 101240 85874 105100 81807 98462 80095 94603 96791 98184 105090 78802 59218 78306 80314 81723 87016 92289 92539 102680 86968 107210 83305 100490 83604 96480 97453 93955 99699 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 660390000 6561 3504 6218 12430;12431;12432;12433;12434 10028;10029;10030;10031;10032;10033;10034 10032 7 9606 Homo sapiens 0.012976316408412458 EIVTYTK Unmodified 852.45928 0.45928418 3849 Q13409-2;Q13409-3;Q13409-6;Q13409;Q13409-5;Q13409-7;A0A140VKE9;B4DPZ3;Q59GU5;E7EQL5;E7EV09;E7EQU2;E7EMU4;E7ESD3;E7ETL8;E7ET01 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 0 6.5 0.5 1 1 46.021 46.108 2 0.0035429 12168 20230619_1886_Aki_TMTPro18x_K_F6 154.31 91.466 442550 353720 392670 461690 481540 495710 501530 471150 660570 486650 565150 554820 528480 454360 518630 527790 656180 611130 408770 324740 404780 457700 493770 498180 509190 483610 659470 493440 582640 556830 540310 475960 535160 533840 626190 579740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 338880000 6562 3849 6219 12435;12436 10035;10036 10035 2 9606 Homo sapiens 0.027152912575843402 EIVVIHQDPEALK Unmodified 1489.814 0.81404372 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2;Q7L4K8 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 4 0.816 1 1 1 49.977 50.039 3 4.4782E-11 13972 20230619_1883_Aki_TMTPro18x_K_F4 182.02 138.25 692750 573580 647120 703440 594940 685050 687790 698120 781290 878420 872660 946050 964230 803260 872150 970430 958620 1016200 640270 526190 660730 699560 625000 694450 691280 717210 794890 879900 895570 952210 976710 842260 893810 974790 916770 964470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 820160000 6563 1736 6220 12437;12438;12439 10037;10038 10037 2 9606 Homo sapiens 0.08872925549098909 EIYELEK Unmodified 922.46476 0.46476349 4340 Q96EH3 MALSU1 Mitochondrial assembly of ribosomal large subunit protein 1 yes yes 0 0 0 2.5 0.5 1 1 51.358 51.416 2 0.027787 14761 20230619_1882_Aki_TMTPro18x_K_F3 96.253 28.272 87668 64686 78670 94115 96544 100140 103560 103060 125980 117310 114190 116750 128590 108890 100520 135050 135010 136270 80946 59479 81029 92663 99051 100860 104670 105460 126620 117800 118330 118300 129480 113980 104800 135260 128850 129410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130260000 6564 4340 6221 12440;12441 10039 10039 1 9606 Homo sapiens 0.00042970049389623455 EIYTHFTCATDTK Unmodified 1585.7083 0.70825802 3415;3738;3385 P04899-4;P04899;Q96C71;P04899-2;B3KX51;P04899-6;P04899-3;P04899-5;B3KP24;Q6LCB5;P08754;P63096;P63096-2 GNAI2;WUGSC:H_LUCA15.1;GNAI3;GNAI1 Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-1 no no 0 0 0 6.5 1.12 1 1 1 1 46.963 47.037 3 2.9781E-11 12596 20230619_1886_Aki_TMTPro18x_K_F6 186.13 158.27 412310 365250 396670 464310 414220 403710 433310 440420 375630 487720 467770 478480 505170 378770 391520 507000 502230 549330 381330 335120 404840 459940 428760 413850 434260 448780 390260 489680 477250 482740 508680 401130 406890 509400 479790 521130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 444440000 6565 3385;3415;3738 6222 12442;12443;12444;12445 10040;10041 10040 2 9606 Homo sapiens -0.06116778358705233 EIYTNLGPR Unmodified 1061.5506 0.55055881 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;A0A994J583;A0A994J7K1;O00507;O00507-2 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 0 0 0 6.5 0.5 1 1 45.644 45.732 2 0.00090694 11641 20230619_1887_Aki_TMTPro18x_K_F7 139.74 93.314 61925 53936 66518 66331 68452 77941 78423 73780 86911 77296 74810 67572 61506 51766 77230 70027 75289 66756 57319 49472 67228 66131 71220 77832 78742 75754 87550 77644 76728 68514 63946 54894 78107 69920 71996 63471 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31497000 6566 1867 6223 12446;12447 10042;10043 10043 2 9606 Homo sapiens 0.022245549549097632 EKAEGDVAALNR Unmodified 1271.647 0.64697839 3746 P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1 TPM4;HEL-S-108 Tropomyosin alpha-4 chain yes no 0 0 1 3.5 0.5 1 1 39.205 39.254 3 0.00013892 9301 20230619_1882_Aki_TMTPro18x_K_F3 110.8 89.17 472270 428290 501870 490920 773070 689700 811730 726560 641170 581990 640580 332570 368080 243100 716000 196730 218070 133490 437220 392520 511400 493490 780510 683600 810480 735590 662470 588140 644010 346390 399650 251730 691600 196730 212870 127770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 450180000 6567 3746 6224 12448;12449 10044;10045;10046 10044 3 9606 Homo sapiens 0.022020777241777978 EKAEGDVAALNRR Unmodified 1427.7481 0.74808942 3746 P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1 TPM4;HEL-S-108 Tropomyosin alpha-4 chain yes no 0 0 2 5.5 0.5 1 1 36.305 36.381 4 8.0574E-06 8037 20230619_1885_Aki_TMTPro18x_K_F5 127.78 110.11 113410 109120 138670 116780 208220 147360 170390 161530 136140 107480 120330 64100 73080 50466 146840 37915 53419 42192 105180 99925 139580 117830 208910 147270 172930 162550 139950 110180 121930 66694 79391 51953 142260 38914 51936 40070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99584000 6568 3746 6225 12450;12451 10047;10048 10047 2 9606 Homo sapiens 0.05132529426873589 EKDQADFR Unmodified 1007.4672 0.46722311 507 A0A024R8A7;Q96I24;Q96I24-2 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 0 0 1 3 0 1 34.887 34.948 3 0.025073 7553 20230619_1882_Aki_TMTPro18x_K_F3 68.847 44.055 61528 38148 90712 80094 142620 106580 114910 106510 69967 68497 110190 55855 46156 38598 143960 21863 31613 27616 57031 35288 90387 77742 142670 105800 116110 107780 75356 70820 108190 56831 53615 39524 137800 22975 31305 26183 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31454000 6569 507 6226 12452 10049 10049 1 9606 Homo sapiens -0.03621181492951564 EKEDAQEVELQEGK Unmodified 1630.7686 0.76860967 3790 Q02952-3;Q02952-2;Q02952 AKAP12 A-kinase anchor protein 12 yes no 0 0 1 3 0 1 43.371 43.44 3 9.9317E-05 11118 20230619_1882_Aki_TMTPro18x_K_F3 81.428 71.263 54866 47238 53683 45432 47219 52790 50981 50737 62602 69743 81879 87028 77293 63023 76292 90060 90015 81464 50741 43236 54479 46184 49685 52812 51584 52484 63895 69966 82935 86758 78973 67209 78428 89546 85934 77497 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61611000 6570 3790 6227 12453 10050 10050 1 9606 Homo sapiens -0.021543894946034925 EKEDDEEEEDEDASGGDQDQEER Unmodified 2681.9809 0.98085946 577 A0A024R9J0;O60216 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 0 1 1 0 1 35.156 35.156 4 1.1482E-25 8065 20230619_1880_Aki_TMTPro18x_K_F1 177.03 174.3 6262.1 4040.5 5920 7400.7 8943.3 11523 6815.4 7151.3 11537 10500 10420 12625 11368 10287 6942.7 5846 16538 16282 5780.1 3728.9 6097.9 7238.8 9017.5 11229 7139.3 7695.3 11444 10505 10790 12614 11377 10469 7658.7 6532.7 15729 15355 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34927000 6571 577 6228 12454 10051 10051 1 9606 Homo sapiens -0.29285173775042495 EKEEFAVPENSSVQQFK Unmodified 1994.9585 0.9585357 187;2630 Q9UHD9;B4DZF1;B4DM19;A0A024R258;B3KNI8;B3KNI2;Q9UMX0-2;Q9UMX0;Q9UMX0-4 UBQLN2;UBQLN1 Ubiquilin-2;Ubiquilin-1 no no 0 0 1 5.5 0.5 1 1 51.673 51.749 3 4.7659E-05 14491 20230619_1885_Aki_TMTPro18x_K_F5 95.094 83.655 283320 240700 290470 311150 247630 300100 282830 281740 314590 362700 335480 346800 382720 313010 321240 411100 382530 397300 262100 220910 293960 308260 261760 303820 284280 291330 319870 361670 345330 351650 386150 329250 331620 410490 365510 377450 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 322440000 6572 2630;187 6229 12455;12456 10052;10053;10054 10052 3 9606 Homo sapiens 0.0008547744776024047 EKEELEEIR Unmodified 1173.5877 0.58773217 3611 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 2 0.816 1 1 1 42.442 42.491 3 0.079413 10947 20230619_1881_Aki_TMTPro18x_K_F2 45.359 20.521 273300 245610 317930 287620 533310 545120 368700 381550 586820 308510 382790 349800 334750 288460 360690 340990 352840 285510 253210 225150 322230 290340 532480 528010 387830 398890 576510 317710 400000 351410 344510 302190 365760 338860 337200 272020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285180000 6573 3611 6230 12457;12458;12459 10055 10055 1 9606 Homo sapiens 0.007881817099814725 EKEELMER Unmodified 1062.5016 0.5015597 2184 P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;V9HWC0;P26038;A0A8V8TKR9 RDX;HEL70;MSN Radixin;Moesin yes no 0 0 1 2.5 0.5 1 1 38.829 38.89 3 0.077334 9274 20230619_1881_Aki_TMTPro18x_K_F2 49.5 22.902 348810 310710 441660 377620 430150 413430 436250 408330 408730 471040 512440 388920 460980 296770 503580 306050 373040 233270 323420 284940 440280 376540 446960 415450 438920 419190 422330 469960 517950 395470 473170 310060 502970 304110 357220 222840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 564310000 6574 2184 6231 12460;12461 10056 10056 1 9606 Homo sapiens -0.027191013963602018 EKEPVVVETVEEK Unmodified 1513.7876 0.78755419 4236 Q8N5N7;Q8N5N7-2 MRPL50 39S ribosomal protein L50, mitochondrial yes no 0 0 1 2.5 0.5 1 1 48.538 48.61 3 0.0010094 13487 20230619_1882_Aki_TMTPro18x_K_F3 88.768 68.341 127920 103760 123890 133580 150550 156350 161170 150660 179650 151650 168750 158850 173470 153950 167040 168090 162610 168510 118240 95240 126650 132740 154480 156250 162410 154350 181450 153510 173810 160840 176620 159680 169740 168730 155670 160030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184080000 6575 4236 6232 12462;12463 10057;10058 10058 2 9606 Homo sapiens 0.05121191867078778 EKFEEMIQQIK Oxidation (M) 1437.7174 0.71736614 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;Q96GI1;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 1 1 6.5 0.5 1 1 51.706 51.781 3 0.00046432 14639 20230619_1886_Aki_TMTPro18x_K_F6 105.17 74.628 258310 223290 233130 283230 317560 270360 280080 256700 324940 311140 330230 285520 289990 253030 290380 307600 271830 299710 238740 204880 240370 280860 321640 274310 285900 264780 328740 310820 336510 290050 297250 264960 294370 307760 260460 284650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 628120000 6576 2633 6233 12464;12465 10059 10059 1583 1 9606 Homo sapiens 0.016016149976394445 EKFEEMIQQIK Unmodified 1421.7225 0.72245152 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;Q96GI1;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 1 7.5 0.5 1 1 60.924 60.962 3;4 0.00024447 18165 20230619_1888_Aki_TMTPro18x_K_F8 119.76 71.76 949050 796490 858100 951360 791060 1029200 903320 993690 1198100 1104200 1029900 1001100 1133800 889610 1073300 1193200 1016500 1035500 877000 730460 878950 949120 831980 1033700 913690 1020200 1197300 1107100 1069000 1017500 1150400 937610 1090000 1185000 973250 985120 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 470320000 6577 2633 6233 12466;12467 10060;10061;10062 10062 3 9606 Homo sapiens 0.028459188602482755 EKFENLGIQPPK Unmodified 1398.7507 0.75071518 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PM69;E9PKD5;E9PMD8;E9PN50 PSMC3 26S protease regulatory subunit 6A yes no 0 0 1 1 0 1 51.886 51.886 3 0.04736 15103 20230619_1880_Aki_TMTPro18x_K_F1 48.704 33.549 60028 52256 55909 65922 51837 64435 67088 59433 66097 74198 67077 60995 66008 49665 71509 51560 47066 51229 55496 47944 57151 65416 54622 65142 66719 61489 67479 73776 68714 62090 67577 51750 71161 51842 45298 48645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81886000 6578 4761 6234 12468 10063 10063 1 9606 Homo sapiens 0.06728984831852358 EKFEPTVFR Unmodified 1151.5975 0.597509 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;Q75MG1;E7EMS9;E9PFE3;B7Z6N5;C9JF98;F8WDX8;Q9Y6E2-2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 1 7.5 0.5 1 1 47.553 47.627 3 0.003377 12467 20230619_1887_Aki_TMTPro18x_K_F7 87.298 66.778 710860 655200 696200 684370 797300 842160 833010 821480 1007100 915420 958440 802300 771730 647110 960960 681260 617750 590260 657720 599950 709900 691260 821040 839540 843140 842900 1013800 916800 976750 814310 801980 674440 953380 680090 594180 561690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 724270000 6579 607 6235 12469;12470 10064;10065 10064 2 9606 Homo sapiens 0.027774145060448063 EKIETELR Unmodified 1016.5502 0.55022446 2805 D0PNI1;P63104;E7EX29;B0AZS6;E7ESK7;E9PD24;E7EVZ2 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 1 3.5 0.5 1 1 40.478 40.528 3 0.002855 9807 20230619_1882_Aki_TMTPro18x_K_F3 99.815 26.887 1531400 1417700 1764100 1658400 2062400 2123200 1949800 1637400 1957300 1771800 2197800 1346000 1366800 862800 2580600 614730 659160 441080 1419000 1299500 1776300 1661300 2113300 2101300 1972600 1710500 2001600 1770900 2203700 1369800 1474100 894290 2485900 618990 647750 421580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1116000000 6580 2805 6236 12471;12472 10066;10067 10066 2 9606 Homo sapiens 0.042611352350377274 EKLEAEMEAAR Unmodified 1275.6129 0.61290107 2614 B4DWI8;Q8WXF1;A0A024RDP4;Q8WXF1-2 PSPC1 Paraspeckle component 1 yes no 0 0 1 2.5 0.5 1 1 45.397 45.476 3 0.045955 12033 20230619_1882_Aki_TMTPro18x_K_F3 51.211 34.185 244730 211730 254030 258320 279670 307080 281330 281410 314520 318220 333270 303160 345510 266420 310130 340690 295380 264760 226450 194200 257690 257710 288490 306250 284660 290210 319390 319180 341370 307350 350310 279970 315330 336880 282540 252380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 429770000 6581 2614 6237 12473;12474 10068 10068 1 9606 Homo sapiens -0.013880867590614798 EKLPGELEPVQATQNK Unmodified 1779.9367 0.93667805 3162;3172 K7EL20;O75821;Q6IAM0;K7EP16;K7ER90 EIF3G Eukaryotic translation initiation factor 3 subunit G no no 0 0 1 5.5 0.5 1 1 48.411 48.489 3 3.1601E-14 13217 20230619_1886_Aki_TMTPro18x_K_F6 170 144.68 233930 198310 212480 226760 221980 258690 244150 244330 267150 300100 282190 242480 292830 216740 260870 292680 234420 217880 216190 181790 217880 227130 230580 258860 245640 252030 271680 298490 289000 248020 296710 228520 264560 288650 224430 207790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 609430000 6582 3162;3172 6238 12475;12476 10069;10070 10070 2 9606 Homo sapiens 0.07790717489865528 EKLPLDINPVVHPHGHIFK Unmodified 2189.2109 0.21094283 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 1 2 0 1 49.832 49.891 6 1.1043E-14 14409 20230619_1881_Aki_TMTPro18x_K_F2 153.21 146.1 86474 87446 98155 109180 101620 113080 90710 89654 94264 108750 122650 112190 103460 80106 127170 91139 100310 83488 80168 80181 98840 108490 104960 113520 92282 93764 97018 108950 123650 112630 107210 84291 127210 91120 96119 79440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 413430000 6583 307 6239 12477 10071 10071 1 9606 Homo sapiens 0.16390580039615088 EKNPDMVAGEK Unmodified 1216.5758 0.57578728 2657 Q6IBR8;B5BU01;P20042;Q96I16 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 1 4.5 0.5 1 1 40.302 40.368 3 0.00019943 9694 20230619_1883_Aki_TMTPro18x_K_F4 115.78 80.043 214230 181600 311660 260870 368640 279890 357260 294570 235760 287940 336280 175710 180320 108310 454630 61353 101760 52652 198890 166870 308920 257270 376430 282200 357180 299840 251160 287670 332960 181300 201190 111770 435810 63271 100430 50282 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109110000 6584 2657 6240 12478;12479 10072 10072 1 9606 Homo sapiens -0.023837583048589295 EKPDQDAEGKAEEK Unmodified 1572.7267 0.72674485 3759 P80723;P80723-2 BASP1 Brain acid soluble protein 1 yes no 0 0 2 3 0.816 1 1 1 37.803 37.856 4 0.0010384 8718 20230619_1882_Aki_TMTPro18x_K_F3 87.932 77.465 418330 232350 623820 500990 600460 575880 338880 438220 329740 378380 714350 758690 443790 506070 701750 186780 608250 487950 387610 215150 615090 484530 617320 573280 357940 455710 351490 396870 703680 743490 474260 512970 700950 211580 582040 460710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 504870000 6585 3759 6241 12480;12481;12482 10073;10074 10074 2 9606 Homo sapiens -0.03670945183148433 EKPEEAGHEAEER Unmodified 1509.6696 0.66956432 4594 Q9NU22;Q6AI22 MDN1;DKFZp686H16106 Midasin yes no 0 0 1 1.5 0.5 1 1 30.056 30.09 4 0.0042486 6054 20230619_1880_Aki_TMTPro18x_K_F1 63.128 52.47 6995.3 3755.8 5837.9 7275 7455.3 8903.2 7487.5 7345.4 9078.3 7717.3 8466 10372 10163 6237 10114 5764.5 11813 10330 6445.7 3472.3 6060.8 7069.4 7627.3 8835.4 7594.8 7623.7 9132.3 7860.7 8804.4 10253 10302 6561.8 10353 6069.4 11276 9768.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15607000 6586 4594 6242 12483;12484 10075 10075 1 9606 Homo sapiens -0.06488367668839601 EKPGVESMR Unmodified 1031.507 0.50697943 4706 Q9Y2A7;Q9Y2A7-2;A0A994J4I5;A0A994J6K9;B3KMK7 NCKAP1 Nck-associated protein 1 yes no 0 0 1 5.5 0.5 1 1 36.143 36.219 3 0.090537 8058 20230619_1886_Aki_TMTPro18x_K_F6 43.308 15.09 133420 91079 121870 128520 149470 162050 143870 140810 179970 158300 193080 189830 177510 143470 157230 147280 207490 171510 123150 83745 125210 127110 152980 160800 146500 145790 181720 160050 196740 189660 180680 149770 162940 149360 197790 162770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86186000 6587 4706 6243 12485;12486 10076 10076 1 9606 Homo sapiens -0.007513778138900307 EKPNCLDLR Unmodified 1143.5706 0.57064232 3214 O00451;O00451-2;O00451-3;E5RGR6;B4DS89 GFRA2 GDNF family receptor alpha-2 yes no 0 0 1 6 0 1 41.072 41.166 3 0.049289 10035 20230619_1886_Aki_TMTPro18x_K_F6 54.286 27.745 169950 117740 157810 132200 451290 482230 191700 167140 240370 165680 291320 391510 209500 277890 398960 245140 363600 445680 156910 108000 165480 136620 438630 453850 209770 192430 244010 174820 293950 383020 226090 288330 399570 258560 348800 420880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290920000 6588 3214 6244 12487 10077 10077 1 9606 Homo sapiens 0.004599826231924453 EKPPITVVGDVGGR Unmodified 1422.7831 0.78307794 16;527 E7EPA1;B2R7R5;A0A024QYY3;O60256-3;O60256;O60256-4;O60256-2;I3L0S1;I3L4G9;B4DP31;A0A024R8M4;Q14558;Q14558-2;C9J168 PRPSAP2;PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 2;Phosphoribosyl pyrophosphate synthase-associated protein 1 no no 0 0 1 7.5 0.5 1 1 46.704 46.772 3 9.528E-07 12069 20230619_1887_Aki_TMTPro18x_K_F7 131.4 106.54 544950 469090 469280 501490 525830 606710 587580 519530 630070 677550 694130 680730 727940 624520 688400 710190 806450 770050 503490 429720 484130 505300 543730 603680 590050 541130 642340 676460 710630 688970 740100 650710 707300 715620 770210 730890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 659350000 6589 16;527 6245 12488;12489 10078;10079 10078 2 9606 Homo sapiens 0.08859772234814045 EKPQANVPSALPSLPAGSGLK Unmodified 2060.1266 0.12660408 4659 Q9UEE9;B2R9W9 CFDP1 Craniofacial development protein 1 yes no 0 0 1 2 0 1 54.558 54.582 3 0.001191 16411 20230619_1881_Aki_TMTPro18x_K_F2 67.866 50.584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6590 4659 6246 12490 10080 10080 1 9606 Homo sapiens 0.1389458443222793 EKPQQHNFTHR Unmodified 1420.696 0.69599427 1126 E9PF19;B4DY50;Q96E41;A0A0S2Z5F3;Q8N2L6;B2RB52;A0A384MDS4;Q9Y4P3;F8WDI9;A0A0S2Z5C1;F8WCR3 TBL2 Transducin beta-like protein 2 yes no 0 0 1 8 0 1 27.806 27.836 4 0.0060044 4871 20230619_1888_Aki_TMTPro18x_K_F8 76.522 53.605 8527.7 5371.7 10259 11119 12553 12319 13007 10787 16178 8216.4 10315 9771.7 9006.7 9824.3 9029.1 7657.8 11898 9388.3 7887.3 4967.5 10317 10760 12856 12324 13174 11067 16037 8509.3 10798 9852.7 9255.8 10009 9330.1 7834.4 11339 8907.9 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13050000 6591 1126 6247 12491 10081;10082 10081 2 9606 Homo sapiens 0.002474108037631595 EKPSYDTETDPSEGLMNVLK Unmodified 2252.0518 0.051843739 552 Q6NVY0;A0A024R904;Q9HB71;Q9HB71-3 CACYBP Calcyclin-binding protein yes no 0 0 1 6 0.816 1 1 1 58.947 59.004 4 4.4239E-17 17540 20230619_1885_Aki_TMTPro18x_K_F5 169.28 146.7 126740 91097 106740 125490 80741 118060 102120 98021 123000 129910 108310 94876 120960 109340 138000 155730 138460 151060 116950 83721 109830 123750 86813 119400 102400 102420 123630 128560 112350 98506 123920 114780 140150 155420 132560 143480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 908250000 6592 552 6248 12492;12493;12494 10083;10084 10083 2 9606 Homo sapiens -0.024100109519622492 EKPTDMQNFGLR Oxidation (M) 1450.6875 0.68746299 645 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 0 1 1 6.5 0.5 1 1 42.017 42.102 3 0.013541 10114 20230619_1887_Aki_TMTPro18x_K_F7 68.676 50.58 66521 57863 62144 69848 78698 79596 79175 79676 93508 81713 88050 82575 77605 68244 80519 95437 83393 85068 61501 53064 63784 69684 80413 79773 80232 81436 94195 82513 90111 83359 79696 72279 82072 94844 79774 80902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134800000 6593 645 6249 12495;12496 10085 10085 383 1 9606 Homo sapiens -0.019853239477242823 EKPVCGTTYK Unmodified 1181.5751 0.575059 3890 Q14444-2;Q14444;G3V153;B3KXU8 CAPRIN1 Caprin-1 yes no 0 0 1 5.33 3.09 1 1 1 39.452 39.469 3 0.0010722 9235 20230619_1888_Aki_TMTPro18x_K_F8 95.401 68.286 518750 268720 556840 553990 604690 686080 613420 658410 648160 484570 582820 504500 576980 464830 534010 310860 647380 478870 478860 248740 563220 537310 624520 682440 619280 669690 655160 499880 600300 509870 586910 473080 548660 325110 617150 453670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 781480000 6594 3890 6250 12497;12498;12499 10086;10087;10088 10088 3 9606 Homo sapiens -0.008465529539080308 EKPVDLQNFGLR Unmodified 1414.7569 0.75686319 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 1 1 0 1 52.762 52.762 3 2.7892E-07 15466 20230619_1880_Aki_TMTPro18x_K_F1 139.46 112.21 161190 136110 158390 154270 137350 172940 160730 164720 205950 202040 196620 186080 208810 179930 198720 226350 203460 226090 149050 124760 160810 154620 145210 173260 162160 169800 206920 201750 202640 189490 212260 188280 202680 226610 194780 214660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 642620000 6595 4016 6251 12500 10089 10089 1 9606 Homo sapiens 0.0660750306335558 EKPYFPIPEEYTFIQNVPLEDR Unmodified 2723.3483 0.34828376 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 1 6.14 1.25 1 1 2 2 1 62.987 63.022 3;4 2.7701E-23 19478 20230619_1886_Aki_TMTPro18x_K_F6 180.63 170.09 570590 500040 579430 617600 476260 609310 575110 598270 587840 598330 606030 610850 658830 588550 655310 693770 606660 645350 527910 458660 586620 613990 506050 616330 574910 612050 599030 605040 623460 619000 670660 613210 663980 692740 581180 613330 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 21471000000 6596 3776 6252 12501;12502;12503;12504;12505;12506;12507 10090;10091;10092;10093 10090 4 9606 Homo sapiens 0.055543545472573896 EKSDDILEEGEK Unmodified 1390.6464 0.64636926 2240 B4DXX1;B2R713;Q7Z2T5;Q7Z2T5-2 TRMT1L TRMT1-like protein yes no 0 0 1 2 0 1 45.637 45.719 3 0.0032884 12449 20230619_1881_Aki_TMTPro18x_K_F2 83.087 70.727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6597 2240 6253 12508 10094 10094 1 9606 Homo sapiens -0.03332806506205088 EKVDLVLLGK Unmodified 1112.6805 0.68051035 3563 P38117-2;P38117 ETFB Electron transfer flavoprotein subunit beta yes no 0 0 1 1 0 1 57.215 57.215 3 0.022828 17334 20230619_1880_Aki_TMTPro18x_K_F1 64.199 40.642 80603 72961 84796 92704 96534 104730 106710 112770 117160 93728 119620 99445 90647 73409 102850 71056 89536 84819 74613 66936 86026 92162 99581 105160 107330 114110 118720 95918 121230 99846 93955 76495 103460 72330 85763 80433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222320000 6598 3563 6254 12509 10095 10095 1 9606 Homo sapiens 0.12867731234041457 EKVESELR Unmodified 988.51892 0.51892433 3511 P27348;B4DMT8;E9PG15;Q53RR5 YWHAQ 14-3-3 protein theta yes no 0 0 1 3 0.816 1 1 1 37.629 37.681 3 0.00907 8634 20230619_1882_Aki_TMTPro18x_K_F3 91.584 13.795 1414500 1030100 1443000 1400800 1796400 1560600 1666200 1475900 1835300 1671900 1848800 1142600 1235000 865070 1512200 515340 787850 429890 1307200 946510 1468000 1386300 1831000 1565000 1692500 1519000 1859800 1663300 1864900 1174400 1290500 884250 1487200 522550 758330 410530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1600699999.9999998 6599 3511 6255 12510;12511;12512 10096;10097 10096 2 9606 Homo sapiens 0.0242056220096174 EKYDEEISSLYR Unmodified 1530.7202 0.72020291 1036 O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;A0A7I2V581;Q57Z91;O60282-2;A0A7I2V3V4 KIF5C Kinesin heavy chain isoform 5C;Kinesin-like protein yes no 0 0 1 4 0 1 50.601 50.633 3 7.5868E-07 14263 20230619_1883_Aki_TMTPro18x_K_F4 128.22 117.64 248190 200860 240420 299400 220510 257200 268920 257700 280700 347510 310220 314260 329760 272450 274640 359980 326740 339610 229420 184670 244950 293520 232010 263200 268760 265750 286850 345240 317740 319070 333290 287090 283600 358940 312200 322730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162360000 6600 1036 6256 12513 10098 10098 1 9606 Homo sapiens -0.0239283834384878 EKYDTDFYILDK Unmodified 1548.7348 0.73479034 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 1 6 0.816 1 1 1 57.686 57.746 3 0.00027946 17198 20230619_1886_Aki_TMTPro18x_K_F6 97.121 64.126 376540 328000 347220 400370 393950 387530 418930 363050 460220 449180 481080 478310 467910 429120 493270 575050 481040 496310 348090 300830 356140 398180 405860 392500 422120 375180 467360 450320 492140 482820 479370 451680 500950 570900 460480 472180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 702480000 6601 1207 6257 12514;12515;12516 10099;10100;10101 10100 3 9606 Homo sapiens -0.017627661957249074 EKYDYVGR Unmodified 1028.4927 0.49270958 3235 O15173;O15173-2;U3KQM0;U3KPU8 PGRMC2 Membrane-associated progesterone receptor component 2 yes no 0 0 1 6 0 1 38.43 38.513 3 0.083302 8921 20230619_1886_Aki_TMTPro18x_K_F6 46.457 34.609 219090 184940 212500 220110 268150 261370 263790 245120 279430 249590 339060 260150 218010 174640 325770 153370 197040 123580 202570 169600 217270 219970 273720 260910 266700 251700 285840 252310 339400 260770 231160 181810 321300 153450 189260 117960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139220000 6602 3235 6258 12517 10102 10102 1 9606 Homo sapiens -0.020397069705268223 EKYEITEQR Unmodified 1194.5881 0.58806652 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 RPL6 60S ribosomal protein L6 yes no 0 0 1 3.5 1.12 1 1 1 1 38.207 38.27 3 0.0060773 8810 20230619_1883_Aki_TMTPro18x_K_F4 74.533 46.236 850690 641420 718460 860210 1036000 1026200 984690 1009500 1218400 1045200 1159900 964600 1134100 904040 1016600 1045300 1045200 747620 785210 589190 746390 852620 1049300 1024800 1002800 1033100 1225200 1052400 1190200 981620 1152200 941850 1037400 1031700 997700 714330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3086099999.9999995 6603 680 6259 12518;12519;12520;12521 10103;10104 10104 2 9606 Homo sapiens -0.0014439857018260227 EKYEITEQRK Unmodified 1322.683 0.68302954 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 RPL6 60S ribosomal protein L6 yes no 0 0 2 6 0 1 37.962 38.038 4 0.00093018 8704 20230619_1886_Aki_TMTPro18x_K_F6 100.55 69.076 250700 257000 236870 228590 343780 233280 269530 303250 250080 263750 268940 181670 255780 170490 211500 246260 267800 137170 232070 234950 243120 233620 345410 237750 275620 303700 256870 265990 273850 188170 259070 180360 219100 240100 254780 131920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 532800000 6604 680 6260 12522 10105 10105 1 9606 Homo sapiens 0.034595349010032805 ELAAGAFGTK Unmodified 963.50255 0.50254598 1003 Q59GQ7;A0A0C4DGA6;Q14527-2;Q14527;A8K5B6 HLTF Helicase-like transcription factor yes no 0 0 0 8 0 1 50.226 50.302 3 0.012841 13660 20230619_1888_Aki_TMTPro18x_K_F8 66.758 41.982 32652 24589 31532 31111 26492 30474 32531 28251 42420 30938 31326 33722 36611 26457 35157 38755 32470 39320 30168 22573 32047 30878 28106 30812 32746 29110 42179 31234 32914 33869 37098 28203 35650 38764 31140 37315 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16902000 6605 1003 6261 12523 10106 10106 1 9606 Homo sapiens 0.019334810348595965 ELAALGCSVPVPPVR Unmodified 1563.8443 0.84429799 4366 Q96IR7 HPDL 4-hydroxyphenylpyruvate dioxygenase-like protein yes yes 0 0 0 1 0 1 58.698 58.698 3 0.00022974 17978 20230619_1880_Aki_TMTPro18x_K_F1 92.265 86.986 31556 25695 32088 32526 23962 32598 30178 31734 40819 33026 29135 38237 34545 29186 37408 35200 37279 43350 29182 23581 32437 32291 25765 32922 30406 32519 40505 33478 30754 38238 35227 30735 37970 35737 35712 41065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75696000 6606 4366 6262 12524 10107 10107 1 9606 Homo sapiens 0.08492960942612626 ELAALPK Unmodified 740.44324 0.44324019 4323 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 6.5 0.5 2 2 49.118 49.199 2;3 0.064675 13153 20230619_1887_Aki_TMTPro18x_K_F7 83.801 25.223 362680 296430 339610 367490 433940 445870 458390 449180 594440 476370 467430 453400 499620 396440 430150 552090 491030 455180 335180 271980 348520 366340 443910 445070 464720 459280 592580 479540 486790 459640 505520 419040 442660 546530 468980 433490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1783499999.9999998 6607 4323 6263 12525;12526;12527;12528 10108;10109 10109 2 9606 Homo sapiens 0.06263629811326155 ELAAQLNEEAK Unmodified 1214.6143 0.61428128 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 2.83 1.07 1 1 2 2 48.75 48.796 2;3 5.4155E-34 13607 20230619_1882_Aki_TMTPro18x_K_F3 247.31 169.58 203270 151250 192380 196920 202060 212480 196700 206070 273450 250870 243710 263580 241680 210340 222140 289100 329050 239480 187760 138900 196470 195320 209060 213550 201060 212140 273060 251560 251450 265170 245990 222760 232460 286300 313180 228320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1539799999.9999998 6608 4746 6264 12529;12530;12531;12532;12533;12534 10110;10111;10112 10111 3 9606 Homo sapiens 0.015558706013280243 ELAEAVAGGR Unmodified 971.50361 0.50360861 1535 B3KMZ6;B2RDF5;A0A3R5W301;Q9UBT2;K7EPL2;U3KQ55;K7ES38 UBA2 SUMO-activating enzyme subunit 2 yes no 0 0 0 3.5 0.5 1 1 43.573 43.63 2 0.00060108 11123 20230619_1883_Aki_TMTPro18x_K_F4 120.12 79.09 285510 247540 237870 277100 297540 326900 316340 321170 435070 342190 385340 360780 364020 301340 324080 373540 405530 376400 263740 226850 246760 278100 305150 326710 321410 329000 434160 345460 396510 363550 370350 316660 335010 374240 387010 357580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 273190000 6609 1535 6265 12535;12536 10113;10114 10114 2 9606 Homo sapiens 0.016716954037633514 ELAEDDSILK Unmodified 1131.5659 0.5659341 3666 P56385 ATP5I ATP synthase subunit e, mitochondrial yes yes 0 0 0 1.5 0.5 1 1 53.028 53.044 2;3 3.9753E-07 15593 20230619_1880_Aki_TMTPro18x_K_F1 142.55 81.577 380690 306890 329370 421660 398010 446710 433600 441800 557450 497050 524770 519810 552230 439740 499900 583560 572170 574040 351590 281900 340490 416520 409300 449590 438840 453160 559440 500180 541080 524130 560130 463970 513710 583310 546760 545320 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 324860000 6610 3666 6266 12537;12538 10115;10116;10117;10118 10115 4 9606 Homo sapiens 0.005413769614278863 ELAEDGYSGVEVR Unmodified 1422.6627 0.66268803 3494 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;E9PPU1;H0YCJ7;F2Z2S8;H0YF32;E9PK82;E9PJH4;E9PQ96 RPS3 40S ribosomal protein S3 yes no 0 0 0 2 0.816 1 1 1 46.974 47.025 2 2.2349000000000002E-57 13044 20230619_1881_Aki_TMTPro18x_K_F2 338.87 303.63 599560 491940 511910 589240 571810 642950 593900 617670 741550 748510 720440 708480 828050 650580 640900 879940 775700 739850 553730 451200 528670 587770 590340 645550 602160 636140 746650 748300 744570 719370 832550 685210 663760 872040 740640 704330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2605600000 6611 3494 6267 12539;12540;12541 10119;10120;10121 10120 3 9606 Homo sapiens -0.03173680549434721 ELAEITLDPPPNCSAGPK Unmodified 1907.9299 0.92987811 1279;4379 R4GND1;A0A1B0GX65;Q969T4;R4GN77;Q96LR5 UBE2E3;UBE2E2 Ubiquitin-conjugating enzyme E2 E3;Ubiquitin-conjugating enzyme E2 E2 no no 0 0 0 5 0 1 57.432 57.49 3 0.015865 16899 20230619_1885_Aki_TMTPro18x_K_F5 53.519 33.779 73173 64328 73063 84613 77127 95491 91678 99003 110760 104260 93762 100830 110130 91683 99895 123820 115730 117070 67691 59043 74385 83910 80281 95771 92180 101000 111110 104980 97771 102230 111410 96581 102770 123460 110590 111260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123680000 6612 1279;4379 6268 12542 10122 10122 1 9606 Homo sapiens 0.012230365469804383 ELAEQLGLSTGEK Unmodified 1373.7038 0.70382456 3162;3172 K7EL20;O75821;Q6IAM0;A8K5K5;B7Z1G0;K7ER90 EIF3G Eukaryotic translation initiation factor 3 subunit G no no 0 0 0 5 0.816 1 1 1 56.271 56.319 3 1.3058E-05 16791 20230619_1883_Aki_TMTPro18x_K_F4 119.88 89.056 435340 357160 361550 397890 350070 441240 390770 437910 496140 472960 456390 432230 515940 387040 475830 533390 470500 558390 401990 327370 373500 399170 366430 442770 395060 448340 497990 474900 472580 439350 522410 408840 484630 534830 450830 529770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 875190000 6613 3162;3172 6269 12543;12544;12545 10123;10124 10123 2 9606 Homo sapiens 0.03192080490043736 ELAEQTLNNIK Unmodified 1271.6721 0.67213051 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 6.5 0.5 1 1 54.018 54.09 3 3.9502E-07 15639 20230619_1886_Aki_TMTPro18x_K_F6 166.87 114.08 179590 140730 159480 168250 169050 208310 193340 206440 222980 209970 206310 227470 228990 195120 211360 251820 218860 240990 165860 129090 163910 168210 175730 207500 194470 211040 224840 212550 213610 229040 232160 205310 215880 251420 209480 228930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1128900000 6614 1661 6270 12546;12547 10125 10125 1 9606 Homo sapiens 0.047161325267552456 ELAETLQQK Unmodified 1058.5608 0.56078914 4105 Q6GMV3 PTRHD1 Putative peptidyl-tRNA hydrolase PTRHD1 yes yes 0 0 0 4.5 0.5 1 1 48.941 48.998 2 2.2721E-06 13337 20230619_1885_Aki_TMTPro18x_K_F5 189.7 97.849 73054 60249 65219 78510 75899 87090 87214 80085 103660 98729 98639 100660 102950 85513 82720 112040 120320 104730 67494 55307 67160 77869 78356 87241 87748 82818 104470 98859 101620 101590 104000 90109 86701 111670 114650 99605 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171830000 6615 4105 6271 12548;12549 10126 10126 1 9606 Homo sapiens 0.03385117889456524 ELAFQISK Unmodified 934.51238 0.51238239 724;3204 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;A0A140T9X3;F6WLT2;A0A140T996;F6TRA5;Q59G92;A0A0A0MT12;B4DIJ6;F6S4E6;A0A140T973;A0A140T9K1;A0A140T9L4;F6R6M7;F6QYI9;A0A0G2JJL7;A0A140T9K2;A0A140T9N3;Q7KYK3;K7EN69;O00148;B4DX78;O00148-2;K7EQN7;A0A024R7H0;O00148-3;A0A0D9SEM9;K7EPJ3 DDX39B;hCG_2005638;BAT1;DDX39A;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A no no 0 0 0 7.5 0.5 1 1 55.343 55.405 2 0.0037981 15912 20230619_1887_Aki_TMTPro18x_K_F7 118.33 56.134 116870 95891 115560 125900 124330 133260 141620 134170 146310 124310 118980 118580 133080 114980 127360 147790 143320 132780 108060 88033 117700 124770 128850 134210 141900 136770 147680 126030 124010 120590 135150 120430 130600 147100 136900 126310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 958210000 6616 724;3204 6272 12550;12551 10127 10127 1 9606 Homo sapiens 0.04250669040243338 ELAGHTGYLSCCR Unmodified 1522.6657 0.66568169 1179 B2R6K4;A0A140VJJ8;P62873;F6X3N5;A0A2L0WW42;P62873-2;A0A994J3T6;F6UT28;A0A994J6X8;Q71UM6;B3KVK2 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes no 0 0 0 6.5 0.5 1 1 38.699 38.772 3 3.7600999999999997E-28 8725 20230619_1887_Aki_TMTPro18x_K_F7 254.18 227.4 111980 79995 121990 127510 128950 120160 125300 132320 124030 109640 132710 137940 111950 99619 120220 108960 133610 133570 103540 73649 123190 124730 133060 122330 126590 133760 126700 112840 134910 137430 115340 104510 122780 110770 127710 126610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 432600000 6617 1179 6273 12552;12553 10128;10129 10129 2 9606 Homo sapiens -0.07474451967891582 ELAILLGMLDPAEK Oxidation (M) 1527.8218 0.82183121 3527 V9HWC7;P30041;A4UCS6 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 1 0 7 0 1 65.352 65.379 3 0.00064286 20307 20230619_1887_Aki_TMTPro18x_K_F7 83.729 69.486 37252 25374 27557 44767 32351 37208 31540 34416 40535 40811 47260 60784 62486 55913 37343 80107 77057 98564 34335 23399 28972 43455 33256 38106 32139 35554 41071 41517 48896 60667 62163 59122 40851 80986 73492 93342 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69868000 6618 3527 6274 12554 10130 10130 2191 1 9606 Homo sapiens 0.07903316754368461 ELAILLGMLDPAEK Unmodified 1511.8269 0.82691659 3527 V9HWC7;P30041;A4UCS6 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 0 7.5 0.5 1 1 67.326 67.346 3 6.8984E-07 20860 20230619_1888_Aki_TMTPro18x_K_F8 131.66 110.71 32512 21561 24336 28536 24146 45190 35585 29511 53630 41920 41149 68066 59986 66702 40547 96233 84891 130170 29965 19813 25456 28437 25604 44017 35731 31585 53093 42561 43791 67874 59883 70382 44346 97916 81108 123110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 95839000 6619 3527 6274 12555;12556 10131;10132 10132 2 9606 Homo sapiens 0.0914762061700003 ELAILLGMLDPAEKDEK Unmodified 1883.9914 0.99141573 3527 V9HWC7;P30041;A4UCS6 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 1 7 0 1 65.326 65.353 3 0.029059 20237 20230619_1887_Aki_TMTPro18x_K_F7 50.079 37.719 12327 11607 9401 11166 13948 12981 14727 13405 16170 13588 11633 11777 15975 11991 16205 14247 11825 11142 11387 10620 9871.9 11343 14136 13012 14835 13670 16214 13674 12347 12046 16162 12486 16221 14117 11351 10618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17630000 6620 3527 6275 12557 10133 10133 1 9606 Homo sapiens 0.08477968246256751 ELALALQEALEPAVR Unmodified 1621.9039 0.90392136 4048 Q5RKV6 EXOSC6 Exosome complex component MTR3 yes yes 0 0 0 6 0.816 1 1 1 64.746 64.785 3 1.3506E-10 20263 20230619_1886_Aki_TMTPro18x_K_F6 153.24 129.25 42052 32203 37942 42709 36388 45844 47033 41015 42769 47721 51241 48262 57430 43841 53634 53263 51763 55186 38837 29575 38903 42296 38238 45990 46670 42438 44170 47880 52437 48839 58191 45896 54500 53483 49568 52383 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 221760000 6621 4048 6276 12558;12559;12560 10134;10135;10136 10136 3 9606 Homo sapiens 0.11784555157669274 ELALGQDR Unmodified 900.46649 0.46649483 3128 Q53Y51;J3KQ18;P30046;B4DJQ7;A0A0F7RQT4;A0A0F7RPW6;B5MC82;B4E259;P30046-2;A6NHG4 DDT;DDTL D-dopachrome decarboxylase;D-dopachrome decarboxylase-like protein yes no 0 0 0 2.5 0.5 1 1 40.988 41.055 2 0.026544 10080 20230619_1882_Aki_TMTPro18x_K_F3 83.168 52.664 74782 59504 75384 83033 101160 112820 87652 86627 140840 94323 114280 113820 110150 95509 94587 98922 118180 123270 69142 54671 76961 82257 102780 111200 90763 90516 139240 95643 118270 114030 111860 99324 97781 100710 112880 116810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 242690000 6622 3128 6277 12561;12562 10137 10137 1 9606 Homo sapiens 0.012280238579933211 ELALNTAQFAK Unmodified 1204.6452 0.64518747 3862 Q59GU6;Q53HL9;Q53GY8;Q13596;Q13596-2;Q13596-3;H0YK42 SNX1 Sorting nexin-1 yes no 0 0 0 8 0 1 55.369 55.431 2 1.9019E-08 15910 20230619_1888_Aki_TMTPro18x_K_F8 201.84 140.93 61150 48863 60815 64039 50664 61724 60339 57237 68732 74787 69841 63777 81122 62321 66269 85298 78367 71934 56533 44862 61676 63388 53741 62475 60558 59271 69643 74310 72047 65236 81694 65572 68418 84544 74819 68489 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20420000 6623 3862 6278 12563 10138 10138 1 9606 Homo sapiens 0.05105068706234306 ELALPGELTQSR Unmodified 1312.6987 0.69867961 2532 B4DLT1;O75436;S4R3Q6;O75436-2 VPS26A Vacuolar protein sorting-associated protein 26A yes no 0 0 0 5 0 1 53.791 53.86 2 0.0049392 15431 20230619_1885_Aki_TMTPro18x_K_F5 108.4 75.459 97129 139830 89525 78121 81259 128390 102810 73257 99942 111310 97575 118470 115420 111990 109070 103240 130330 133500 90180 127370 91439 84826 85936 124880 102270 79730 101990 110740 101180 119570 117050 115260 112150 105620 124520 126460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219340000 6624 2532 6279 12564 10139 10139 1 9606 Homo sapiens 0.0548382141807906 ELALQPK Unmodified 797.4647 0.46470391 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHI7;H7C443;A0A6Q8PFZ6;A0A6Q8PF45;A0A6Q8PH49;A0A6Q8PGN7;F8WCK4;A0A6Q8PGZ9;A0A6Q8PFV5;A0A6Q8PFU7 GARS Glycine--tRNA ligase yes no 0 0 0 6.5 0.5 2 2 46.88 46.966 2;3 0.021834 12573 20230619_1886_Aki_TMTPro18x_K_F6 108.24 32.927 484080 358180 415720 456920 454310 465780 470920 459330 599420 610730 687900 767960 692200 586040 665140 731590 775990 779250 446820 328860 428750 453420 469380 470310 477890 473900 606950 613810 702350 766070 705100 618160 683310 735320 741410 739620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 583600000 6625 3576 6280 12565;12566;12567;12568 10140;10141 10140 2 9606 Homo sapiens 0.05787014840041138 ELAMPGEDLK Unmodified 1101.5376 0.53761086 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 3 0 1 53.76 53.813 3 0.00019958 15813 20230619_1882_Aki_TMTPro18x_K_F3 101.38 71.637 137260 108690 132500 155580 141320 152880 153650 162030 190070 162090 165590 155770 170900 146390 160580 187220 180980 179310 126860 99896 135270 153170 146460 154970 155340 164890 190530 163670 171210 158210 173800 153470 164740 186970 172950 170400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86817000 6626 1417 6281 12569 10142 10142 1 9606 Homo sapiens -0.009096442194959309 ELAMPGEDLK Oxidation (M) 1117.5325 0.53252548 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 1 0 3 0 1 47.294 47.373 2 0.023032 12945 20230619_1882_Aki_TMTPro18x_K_F3 94.409 54.141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6627 1417 6281 12570 10143 10143 883 1 9606 Homo sapiens -0.021539480821274992 ELAMQTFGVLK Unmodified 1235.6584 0.6583947 4606 Q9NVP1;Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 0 0 2 0 1 62.089 62.099 3 0.00030304 19500 20230619_1881_Aki_TMTPro18x_K_F2 102.4 68.022 107570 81517 100610 117200 94468 137190 115030 117910 140990 107530 110920 109320 116240 100730 108770 125570 115370 129300 99366 74936 102840 115620 99477 136640 115590 121510 140860 109370 115440 110660 118140 105500 111200 125940 110420 122720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112480000 6628 4606 6282 12571 10144 10144 1 9606 Homo sapiens 0.04999183493964665 ELANQVSK Unmodified 887.47125 0.47124585 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 5.5 0.5 1 1 41.165 41.256 2 0.0026759 10058 20230619_1885_Aki_TMTPro18x_K_F5 134.77 82.082 112540 62754 145260 130920 172970 177710 142980 170820 172170 123270 176580 185490 173040 159300 176530 94334 193900 185860 104110 58075 145140 127140 176520 175880 146940 173630 173730 129080 180900 184470 176960 161800 179930 101260 185300 175590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112690000 6629 1748 6283 12572;12573 10145;10146 10145 2 9606 Homo sapiens 0.023009080007682314 ELANSPDCPQMCAYK Oxidation (M) 1798.7324 0.73244063 3601 P48739;P48739-2;P48739-3;B2R7P6 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 1 0 4.5 0.5 1 1 44.653 44.714 3 0.00026691 11582 20230619_1883_Aki_TMTPro18x_K_F4 89.466 78.679 120950 102840 106920 112130 122400 108530 124920 126180 133960 142310 153990 134460 168850 138920 116010 180070 178710 171320 111760 94227 110010 112510 125790 110550 126120 128100 136820 142700 157500 137180 169370 145360 122710 179600 170330 162840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281560000 6630 3601 6284 12574;12575 10147;10148 10147 2268 2 9606 Homo sapiens -0.13497629258995403 ELANSPDCPQMCAYK Unmodified 1782.7375 0.73752601 3601 P48739;P48739-2;P48739-3;B2R7P6 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 0 0 4.5 0.5 1 1 49.403 49.458 3 5.3675E-08 13519 20230619_1885_Aki_TMTPro18x_K_F5 137.46 126.82 158000 128320 155680 141530 136770 141990 173890 157660 170320 212950 190000 188690 236510 184370 165570 240650 232020 225850 146080 117610 157970 141970 144430 144000 173090 161480 174770 211430 195990 192540 236480 193390 173680 239860 221310 214690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 431840000 6631 3601 6284 12576;12577 10149;10150 10150 2 9606 Homo sapiens -0.12253325396363834 ELAPAVSVLQLFCSSPK Unmodified 1844.9706 0.97062071 4753;1219 Q9Y678;B3KW21;Q8WUI6;A0A140VK12;Q9UBF2;Q9H9B7;Q9UBF2-2;B3KND4;Q9NUP3 COPG1;COPG;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma-2;Coatomer subunit gamma no no 0 0 0 4 0 1 65.424 65.435 4 3.9437E-06 20598 20230619_1883_Aki_TMTPro18x_K_F4 106.36 86.616 18863 15408 19157 18248 20943 19389 17903 22871 21931 20292 25756 27054 24182 24581 20573 27703 27721 30751 17444 14131 19449 18223 21507 19611 18377 23042 22259 20847 26180 27087 24592 25583 21419 27938 26475 29164 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35497000 6632 4753;1219 6285 12578 10151 10151 1 9606 Homo sapiens 0.08193422657245719 ELAPLFEELR Unmodified 1215.6499 0.6499385 3994 Q53FH6;Q9UHA4-2;Q9UHA4 LAMTOR3 Ragulator complex protein LAMTOR3 yes no 0 0 0 3 0 1 62.969 62.999 2 0.012266 19658 20230619_1882_Aki_TMTPro18x_K_F3 81.263 53.934 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6633 3994 6286 12579 10152 10152 1 9606 Homo sapiens 0.05073952848965746 ELAPLQELIEK Unmodified 1281.718 0.71801807 4158 Q9H8S9;Q7L9L4;Q7L9L4-2 MOB1A;MOB1B MOB kinase activator 1A;MOB kinase activator 1B yes no 0 0 0 4 0 1 63.157 63.163 3 0.045393 19688 20230619_1883_Aki_TMTPro18x_K_F4 38.799 19.705 18203 14532 15965 22194 18623 19596 21380 17404 23967 19591 24733 25331 25125 18071 23012 24509 24205 22914 16812 13366 16483 21729 19205 19959 21464 18017 24278 19865 25361 25215 25506 19227 23511 24433 23138 21785 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26520000 6634 4158 6287 12580 10153 10153 1 9606 Homo sapiens 0.08842777708969152 ELAPYDENWFYTR Unmodified 1702.7627 0.76273643 2186 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QYF7;M0R140 RPS19 40S ribosomal protein S19 yes no 0 0 0 4.2 1.17 2 1 1 1 61.896 61.929 2 9.5064E-28 19109 20230619_1883_Aki_TMTPro18x_K_F4 257.92 187.82 1670100 1527600 1736600 1889600 1813700 1989000 1967000 1917200 2112500 2225800 2146600 1974400 2077500 1796500 2202600 2170600 2052700 1937000 1546000 1401000 1760700 1879800 1881500 2002300 1979100 1971900 2146300 2225100 2197300 2010100 2128400 1878600 2229100 2162600 1964600 1842700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2720200000 6635 2186 6288 12581;12582;12583;12584;12585 10154;10155;10156;10157 10155 4 9606 Homo sapiens -0.06053443215637344 ELAQEQAR Unmodified 943.47231 0.47230849 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 0 1.5 0.5 1 1 31.99 32.022 2 0.081669 6807 20230619_1880_Aki_TMTPro18x_K_F1 66.546 36.199 17353 9006.4 21599 19128 29258 32270 26921 35103 29792 21804 30545 40392 27485 25754 29367 14766 32136 31337 16042 8340.9 21691 18650 29710 31668 27388 35273 30182 23302 31244 39606 28252 26465 29897 15997 30715 29591 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9497800 6636 3921 6289 12586;12587 10158 10158 1 9606 Homo sapiens -0.001688776303353734 ELAQIAGRPTEDEDEK Unmodified 1799.8537 0.85373628 2230 Q6IAU5;B2R665;O15355;B4DDC8;B3KXL8 PPM1G Protein phosphatase 1G yes no 0 0 1 2 0.816 1 1 1 44.869 44.921 3 5.5791E-06 12075 20230619_1881_Aki_TMTPro18x_K_F2 113.86 83.806 251350 203480 202420 247510 187880 257830 225540 244280 294830 312190 308320 314550 361550 303650 253050 384240 339460 341550 232020 186670 209800 246430 197960 259520 227440 252270 297120 311970 317920 318940 362190 317800 264730 382060 323970 324850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1593899999.9999998 6637 2230 6290 12588;12589;12590 10159;10160 10159 2 9606 Homo sapiens -0.014196440287832957 ELAQQIEEETIK Unmodified 1429.73 0.73003931 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8;A0A8V8TQ76;A0A8V8TRI2 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 0 0 2 0.707 1 2 1 58.257 58.271 2;3 2.2646E-05 17917 20230619_1881_Aki_TMTPro18x_K_F2 159.99 107.41 118270 103010 110950 117780 111070 123230 123240 124610 143380 146940 152130 131820 159000 128350 151860 156640 136350 148860 109350 94415 113360 117840 115730 124260 124200 127790 145320 146850 155850 134480 161630 134050 153720 156520 130700 141420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116330000 6638 117 6291 12591;12592;12593;12594 10161;10162 10161 2 9606 Homo sapiens 0.03236349661528948 ELAQQIQK Unmodified 956.5291 0.52909508 2105;3883 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3KTB5;J3QL43;J3QR64;J3QLN6;J3KS25;J3QKZ9;B4E047;D3DSD6;Q14240;Q14240-2;E7EQG2;J3KSN7 EIF4A1;hCG_1793424;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 0 6 0.816 2 2 2 44.609 44.693 2;3 0.00030486 11533 20230619_1886_Aki_TMTPro18x_K_F6 142.19 59.627 664790 349640 594680 706550 717280 805230 752070 765330 934830 822410 800040 786820 973600 752830 605610 716480 1059400 936390 612800 323510 612510 684710 736810 805150 761750 786040 936690 827370 834170 798910 970650 776620 647820 732590 1008400 887510 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1994199999.9999998 6639 2105;3883 6292 12595;12596;12597;12598;12599;12600 10163;10164;10165;10166 10165 4 9606 Homo sapiens 0.049091699261907706 ELAQQVQQVAAEYCR Unmodified 1791.8574 0.85738187 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3QRQ7;J3KRZ1 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 7.17 0.687 1 3 2 59.396 59.444 2;3 1.1174E-42 17545 20230619_1887_Aki_TMTPro18x_K_F7 222.16 210.25 281290 227900 298300 313730 227810 346880 312700 301710 315620 368220 305400 272960 391580 323380 270940 421660 397160 342370 260210 209340 300770 310110 245120 346900 310560 313120 321370 365710 317280 283390 391260 337150 285400 417270 378400 326220 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3561699999.9999995 6640 3137 6293 12601;12602;12603;12604;12605;12606 10167;10168;10169;10170;10171 10169 5 9606 Homo sapiens -0.0068725273590644065 ELAQQVQQVADDYGK Unmodified 1690.8162 0.81622856 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 4.83 1.07 1 1 2 2 60.388 60.43 3;4 5.3302E-14 18082 20230619_1885_Aki_TMTPro18x_K_F5 176.4 158.99 298210 265620 303000 317710 272650 318550 304690 315440 353110 372930 391650 396930 376090 358030 356280 442160 419650 460680 275930 243550 307030 316650 286640 322000 307030 324030 358610 374510 399380 400630 383710 374900 366640 443750 401190 437210 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1457599999.9999998 6641 1328 6294 12607;12608;12609;12610;12611;12612 10172;10173;10174;10175 10174 4 9606 Homo sapiens -0.0015469050376850646 ELAQQVTPGDIVSTYGVR Unmodified 1931.9953 0.99525556 4563 Q9NPI1;Q9NPI1-2;I3L4V5;A0A024R6Q8 BRD7 Bromodomain-containing protein 7 yes no 0 0 0 7 0 1 58.802 58.851 3 3.2966E-05 17332 20230619_1887_Aki_TMTPro18x_K_F7 97.32 87.562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6642 4563 6295 12613 10176 10176 1 9606 Homo sapiens 0.06653774064307072 ELAQTTR Unmodified 817.42938 0.42938104 3621 Q53HU0;P50990;P50990-2;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 3 0.816 1 1 1 31.483 31.551 2 0.022665 6180 20230619_1882_Aki_TMTPro18x_K_F3 101.6 46.097 93466 46902 120330 121890 193450 161320 125060 169940 123830 84399 161610 170920 109260 118940 150260 49894 169920 150160 86422 43612 121020 117320 192810 160280 130200 170600 127520 92465 161880 167710 115290 120710 152580 57209 162250 141630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 134170000 6643 3621 6296 12614;12615;12616 10177;10178 10177 2 9606 Homo sapiens 0.013363523122393417 ELASALK Unmodified 730.4225 0.42250475 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;A6NMY6;H0YMU9;H0YM50;B4DNH8;H0YNB8;H0YKS4;A0A7I2V4P4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 6.5 1.12 1 1 1 1 47.876 47.952 2 0.0076297 12977 20230619_1886_Aki_TMTPro18x_K_F6 130.77 0 1068600 756030 814760 856570 1306400 1383800 1037800 1309700 1131000 936940 1090400 955710 1020000 881720 1112600 976240 1148700 924720 985300 693480 856270 863900 1311100 1357600 1065400 1331700 1145000 967560 1117000 967810 1047800 916820 1130800 977250 1097200 879670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3075099999.9999995 6644 368 6297 12617;12618;12619;12620 10179;10180;10181 10179 3 9606 Homo sapiens 0.04651039431666959 ELASGEYFLK Unmodified 1155.5812 0.58119023 3863 Q13601;Q13601-2 KRR1 KRR1 small subunit processome component homolog yes no 0 0 0 5.5 0.5 1 1 57.767 57.831 2 0.0019046 17256 20230619_1886_Aki_TMTPro18x_K_F6 100.02 86.964 23361 14193 19578 21455 17558 22667 22950 18509 24794 24696 25855 28052 25596 24059 20290 31814 26728 27546 21538 13068 20189 21073 18577 22719 22877 19382 25194 24736 26475 28192 25901 25338 21146 31573 25516 26205 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98435000 6645 3863 6298 12621;12622 10182 10182 1 9606 Homo sapiens 0.009622885492717614 ELATLLHMK Unmodified 1054.5845 0.58450147 3086 H7C0G7;Q9H9Q4;C9JWV4;G5E9Q8;Q9H9Q4-2 NHEJ1 Non-homologous end-joining factor 1 yes no 0 0 0 2 0 1 57.561 57.576 3 0.032494 17632 20230619_1881_Aki_TMTPro18x_K_F2 59.426 46.306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6646 3086 6299 12623 10183 10183 1 9606 Homo sapiens 0.05939260122295309 ELATVLSDQPGLLGPK Unmodified 1636.9036 0.903587 4706 Q9Y2A7;Q9Y2A7-2;A0A994J4I5;A0A994J6K9 NCKAP1 Nck-associated protein 1 yes no 0 0 0 7 0 1 62.519 62.555 3 6.9837E-06 18944 20230619_1887_Aki_TMTPro18x_K_F7 108.58 77.508 94002 69968 91762 102470 77999 77301 96314 85311 78383 170260 178980 199020 208800 174210 143080 198250 190760 224860 86855 64338 93246 100450 82468 80288 95593 88952 85238 168210 180270 199790 208990 181840 149600 200160 182290 213160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 367950000 6647 4706 6300 12624 10184 10184 1 9606 Homo sapiens 0.11061135437785197 ELAVEGMHR Oxidation (M) 1056.5022 0.50222841 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;Q9P2J5-3;Q9HAM7;Q9NPU8;Q9NVC0 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 1 0 2.5 0.5 1 1 32.149 32.218 3 0.00049821 6557 20230619_1881_Aki_TMTPro18x_K_F2 107.79 86.886 49419 40426 53387 46514 72101 69695 57118 70563 67650 56444 75908 72297 55606 55298 69474 52881 72960 59715 45727 37065 54125 46811 72935 68759 58837 71583 68593 58277 76599 72106 58107 57432 70497 53629 69682 56694 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132880000 6648 1603 6301 12625;12626 10185;10186 10185 1045 2 9606 Homo sapiens -0.023762619566468857 ELAVEGMHR Unmodified 1040.5073 0.50731378 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;Q9P2J5-3;Q9HAM7;Q9NPU8;Q9NVC0 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 3 0 1 37.794 37.847 3 2.7873E-05 8702 20230619_1882_Aki_TMTPro18x_K_F3 155.84 130.11 171420 124400 163670 167620 209370 197790 188380 180410 221340 200270 235410 236950 233610 182620 200230 227170 248990 223750 158340 114290 167570 166090 213080 197390 192180 186070 224140 202480 240760 237060 236820 192560 207020 227310 237590 212650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 229330000 6649 1603 6301 12627 10187;10188 10188 2 9606 Homo sapiens -0.011319580940153173 ELAVGSL Unmodified 687.38031 0.38030558 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPW9;H7C3P6;A0A8V8TQG1 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 2.5 0.5 1 1 57.678 57.711 2 0.0031544 17471 20230619_1882_Aki_TMTPro18x_K_F3 156.93 110.58 27921 21333 23303 26361 28299 30186 24574 24011 37990 27784 29546 29306 31376 27036 26930 32929 36726 31916 25772 19578 24144 26251 28931 30098 25402 25064 37582 27958 30781 29614 31771 28271 28033 32922 35011 30343 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44557000 6650 1852 6302 12628;12629 10189;10190 10190 2 9606 Homo sapiens 0.024110640232947844 ELAVQIQK Unmodified 927.53893 0.53893149 543 P38919;A0A024R8W0 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 0 6.5 1.12 1 1 1 1 49.696 49.774 2;3 0.0020288 13804 20230619_1886_Aki_TMTPro18x_K_F6 144.38 45.379 299190 246060 284380 287630 303930 333800 334820 308190 376800 353020 377240 364490 403710 337740 349440 423540 422540 394640 276550 225630 290450 287740 315020 333510 337060 317870 381480 354830 388070 368780 408650 353790 360720 422420 403380 375240 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 374560000 6651 543 6303 12630;12631;12632;12633 10191;10192;10193;10194 10191 4 9606 Homo sapiens 0.07226357931574512 ELCELKPK Unmodified 1015.5372 0.53721693 228 A0A024R394;Q9UHD1;A0A024R3C3;Q9UHD1-2;E9PPQ5;E9PIZ4;E9PSD5 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes no 0 0 1 7.5 0.5 1 1 46.213 46.276 3 0.0098344 11865 20230619_1887_Aki_TMTPro18x_K_F7 83.948 52.013 774390 655720 762590 742540 770590 796520 765370 789080 948210 972510 952410 817430 1145900 811260 758130 1338700 1122700 888610 716120 601040 775500 743830 799520 801570 778000 811330 956430 968400 983990 838120 1144300 865100 801010 1309800 1069100 849630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 722080000 6652 228 6304 12634;12635 10195;10196 10195 2 9606 Homo sapiens 0.030069808513189855 ELCQGLGQPGSVLR Unmodified 1512.7719 0.77186132 1206 A0A140VJT8;P13489;A0A024RC87;H0YCR7 RNH1 Ribonuclease inhibitor yes no 0 0 0 7.5 0.5 1 1 50.637 50.715 2 1.0432999999999998E-21 13805 20230619_1888_Aki_TMTPro18x_K_F8 228.87 178.74 119180 104320 120620 117360 117330 133120 149300 147580 146590 175560 171440 175260 190810 150750 172420 204140 183330 200100 110260 95601 122370 117740 122960 133770 148620 150480 150630 175820 175630 177140 193160 159190 176440 203950 175420 190040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 893540000 6653 1206 6305 12636;12637 10197;10198 10198 2 9606 Homo sapiens 0.03598626869074906 ELCQQIHAECK Unmodified 1414.6333 0.63331893 4199 Q86XP3;Q86XP3-2;B3KTL4;B3KX23 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 0 0 4 0 1 40.593 40.636 3 6.3988E-05 9765 20230619_1883_Aki_TMTPro18x_K_F4 126.95 90.645 174520 123310 139120 162100 162770 173340 182950 184670 207670 202080 205150 203530 218810 196030 180260 247130 228920 205180 160970 113270 144760 160640 167800 174690 184040 188320 210100 203360 211150 206400 221170 205040 187030 245000 218390 195420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 264990000 6654 4199 6306 12638 10199 10199 1 9606 Homo sapiens -0.05741239370900075 ELCQSVMPAGVDK Unmodified 1432.669 0.66903574 4301 Q92621;B4DE72;Q6P486;Q6DKH1;Q4VBX7 NUP205 Nuclear pore complex protein Nup205 yes no 0 0 0 5.5 0.5 1 1 51.815 51.89 3 0.052329 14686 20230619_1886_Aki_TMTPro18x_K_F6 35.35 20.148 50210 51812 59949 56718 57861 58677 63364 58290 63676 46676 51633 36969 44495 35038 66756 40250 36628 35344 46578 47446 60033 56937 60329 59210 63582 59285 64309 47529 53185 37963 46645 36499 65682 40182 35328 33627 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116130000 6655 4301 6307 12639;12640 10200 10200 1 9606 Homo sapiens -0.029992019139399417 ELDALDANDELTPLGR Unmodified 1740.853 0.853008 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 2 1 1 1 60.908 60.922 2 1.5103E-111 18838 20230619_1880_Aki_TMTPro18x_K_F1 353.96 306.38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6656 3811 6308 12641;12642 10201;10202 10201 2 9606 Homo sapiens 0.012215613221087551 ELDDATEANEGLSR Unmodified 1518.6798 0.67979466 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 0 1 0 1 43.716 43.716 2 2.7336E-08 11729 20230619_1880_Aki_TMTPro18x_K_F1 158.01 144.66 137150 106790 125100 130990 142250 175290 140410 140110 177260 168610 202770 210370 224870 184720 155370 234320 244280 238350 126690 97993 128400 130850 146590 173040 142850 146330 179490 170210 207750 210890 225530 194020 164550 234650 232830 226360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196970000 6657 3549 6309 12643 10203 10203 1 9606 Homo sapiens -0.05879804734286154 ELDDRDHYGNK Unmodified 1360.6008 0.60075648 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 1 2.5 0.5 1 1 34.631 34.69 4 7.8308E-05 7541 20230619_1881_Aki_TMTPro18x_K_F2 136.7 106.26 72145 53160 79573 80103 99720 112650 87807 94450 142750 110630 131430 132320 124690 112980 92283 130540 159890 136000 66726 48901 80522 79064 101780 110980 90921 98140 141750 111700 135010 132710 126070 118070 98340 131090 152160 129210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157170000 6658 2484 6310 12644;12645 10204 10204 1 9606 Homo sapiens -0.06511987177918854 ELDECYER Unmodified 1112.4444 0.44443876 847 A0A087WXF7;A0A0C4DFW2;Q9UK53-4;Q9UK53-5;Q9UK53-2;Q9UK53 ING1 Inhibitor of growth protein;Inhibitor of growth protein 1 yes no 0 0 0 1 0 1 39.324 39.324 2 0.0025266 9798 20230619_1880_Aki_TMTPro18x_K_F1 125.31 111.32 37828 26150 33825 30678 40474 44606 40651 34782 47575 43699 50369 55177 46109 42500 41422 51762 60665 58949 34914 23997 34776 30798 41537 43829 41179 36462 48170 44051 51386 55050 47016 44734 43321 52236 57846 55920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29699000 6659 847 6311 12646 10205 10205 1 9606 Homo sapiens -0.10728568672743677 ELDEEHSQELK Unmodified 1355.6205 0.62048887 4500 Q9H2G2;Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase yes no 0 0 0 1.5 0.5 1 1 39.937 39.972 3 0.00011066 9811 20230619_1881_Aki_TMTPro18x_K_F2 118.9 78.316 85773 63288 87411 97276 153470 141930 109410 108510 141020 106790 123030 120790 107920 97075 107210 135070 160230 127090 79276 58232 89672 95941 152830 139390 113810 113100 141100 108540 126400 121270 110710 102880 112100 134590 152570 120920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136850000 6660 4500 6312 12647;12648 10206 10206 1 9606 Homo sapiens -0.043096559578089 ELDGERER Unmodified 1002.473 0.47303677 3746 P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1;A0A590UK79;A0A590UJB9;A0A5F9UKJ4 TPM4;HEL-S-108 Tropomyosin alpha-4 chain yes no 0 0 1 1 0 1 27.913 27.913 3 0.0032632 5155 20230619_1880_Aki_TMTPro18x_K_F1 105.1 57.278 29672 13071 43612 45413 80834 68806 58923 73594 65245 28565 57151 69661 41802 46548 55493 16125 59624 54996 27465 12250 43694 43449 80229 67872 60892 73600 65635 32554 58458 68000 43880 47142 56190 19010 56976 51841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148420000 6661 3746 6313 12649 10207 10207 1 9606 Homo sapiens -0.02810082981272899 ELDGHVLK Unmodified 909.49198 0.4919813 998;2590 A0A0C4DG68;B7ZL34;Q8TB72-2;Q8TB72-4;Q8TB72-3;Q8TB72;E9PR38;B4DU15;H0YEH2;Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;H0YDK8;B3KU37;H0YC97 PUM2;PUM1 Pumilio homolog 2;Pumilio homolog 1 no no 0 0 0 4 0 1 42.441 42.484 3 0.005149 10622 20230619_1883_Aki_TMTPro18x_K_F4 90.601 43.534 323490 237120 268460 322290 336360 349240 328820 317200 397410 352810 385440 346140 416470 296860 327170 413590 426930 373950 298500 217870 278600 318690 343860 350390 334040 327290 400430 354580 397000 350320 419530 314240 340210 411250 407150 355790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166450000 6662 998;2590 6314 12650 10208 10208 1 9606 Homo sapiens 0.03361498380411376 ELDIMEPK Unmodified 973.47903 0.47903335 3840 Q59EG8;Q13200;B4DM22;Q9NSM5;Q13200-3;Q13200-2 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 3 0 1 53.818 53.871 2 0.0166 15891 20230619_1882_Aki_TMTPro18x_K_F3 101.72 78.941 99447 75680 92234 106910 99741 121670 120010 112370 139710 125380 121450 122200 129620 106430 110120 142610 127100 138270 91861 69555 94527 105540 103670 121640 120390 115800 140470 125960 125820 123690 131100 112230 113440 142380 121520 131330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102400000 6663 3840 6315 12651 10209 10209 1 9606 Homo sapiens -0.008767007939809446 ELDLSNNCLGDAGILQLVESVR Unmodified 2414.2111 0.21113835 1206 A0A140VJT8;P13489;A0A024RC87;H0YCR7 RNH1 Ribonuclease inhibitor yes no 0 0 0 6 0.816 1 1 1 65.903 65.94 3 2.3481000000000003E-56 20704 20230619_1886_Aki_TMTPro18x_K_F6 286.81 273.62 31237 21656 30060 29618 28740 33940 36149 36324 34473 35796 42289 38934 37793 33462 40513 44074 35041 44460 28848 19904 30618 29317 30162 34032 35978 36924 35515 36288 42813 39231 38840 35251 40872 44130 33645 42189 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 434640000 6664 1206 6316 12652;12653;12654 10210;10211;10212 10211 3 9606 Homo sapiens 0.060601223960020434 ELDLYDNQIK Unmodified 1249.619 0.6190323 1237 A0A140VK83;Q15435;Q15435-3;C9J177;Q15435-2;C9JRC4;B5MBZ8;C9JD73;Q15435-5;Q15435-4;H7C003 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 0 3.5 0.5 1 1 55.273 55.299 3 7.5036E-05 16514 20230619_1882_Aki_TMTPro18x_K_F3 134.51 109.12 118900 104640 118950 144630 122480 135050 136420 144030 153470 145380 155480 156450 158210 133960 153790 167460 172450 176710 109990 96099 121040 142600 127320 137470 137300 146580 155450 147180 159580 157600 161190 140710 157570 168220 164850 167730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 80690000 6665 1237 6317 12655;12656 10213;10214 10213 2 9606 Homo sapiens 0.00420754744095575 ELDPIQK Unmodified 841.45453 0.45453316 3476 Q6IB54;P18859;P18859-2;Q6NZ59;A8MUH2 ATP5J ATP synthase-coupling factor 6, mitochondrial yes no 0 0 0 3.67 0.471 1 2 47.675 47.729 2;3 0.0080361 12955 20230619_1883_Aki_TMTPro18x_K_F4 89.673 11.925 159700 137270 145200 174620 165690 175910 186830 163270 236340 197460 218970 234710 228030 186000 210750 239800 258680 239490 147610 125960 149200 173250 171090 177520 188580 168710 237140 198960 225980 234920 231630 196320 217400 240010 246900 227540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 728940000 6666 3476 6318 12657;12658;12659 10215;10216 10216 2 9606 Homo sapiens 0.02746407114818794 ELDPTNMTYITNQAAVYFEK Oxidation (M) 2363.0991 0.099128282 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 1 0 7 0 1 62.409 62.445 3 7.707E-05 18909 20230619_1887_Aki_TMTPro18x_K_F7 75.533 67.578 123270 106300 120140 135790 132530 150230 136430 135590 123750 153170 158720 151910 163590 129760 148120 160130 132610 179730 113990 97540 122590 134870 136760 150470 137010 140010 128330 153750 161380 153550 165950 136280 150130 161480 127360 170320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 303140000 6667 2088 6319 12660 10217 10217 1313 1 9606 Homo sapiens -0.027897316809230688 ELDPTNMTYITNQAAVYFEK Unmodified 2347.1042 0.10421366 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 8 0 1 64.435 64.456 4 1.2852999999999999E-22 19724 20230619_1888_Aki_TMTPro18x_K_F8 187.47 171.53 37131 30283 38695 40290 27594 36166 36783 36684 37262 45358 41919 47308 48216 44001 44672 54506 45384 48326 34346 27806 39025 39811 29820 36880 36597 37686 38164 45418 43110 47817 48859 46027 45583 54234 43437 45955 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148300000 6668 2088 6319 12661 10218 10218 1 9606 Homo sapiens -0.015454278183369752 ELDQDMVTEDEDDPGSHK Oxidation (M) 2074.8273 0.82732311 2814 D3DS96;Q9NRL2-2;Q9NRL2;Q59G54;A0A087WWN7 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 0 1 0 1 0 1 42.051 42.051 3 0.011663 11039 20230619_1880_Aki_TMTPro18x_K_F1 54.368 45.205 9598.3 9362.8 12409 10836 13199 11707 12775 9427.8 16309 16339 16021 14463 16905 12332 15156 16698 14077 13950 8907.4 8579.6 12370 10838 13611 11733 13009 9983.1 16411 16092 16478 14697 17125 13030 15392 16553 13478 13279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16148000 6669 2814 6320 12662 10219 10219 1678 1 9606 Homo sapiens -0.16709745773096074 ELDSGLAESVSTLIWAAPR Unmodified 2014.0371 0.037120373 2078 P53990-4;P53990;P53990-2;A8K5S3;P53990-5;H3BMU1;P53990-3;H3BUI0;H3BQF7;J3KR23;F5GXM3;B4DHF3 IST1 IST1 homolog yes no 0 0 0 8 0 1 65.519 65.539 3 1.9935E-10 20176 20230619_1888_Aki_TMTPro18x_K_F8 133.52 118.43 6611.8 5178.6 5062.4 6783.7 5972.8 6923.6 7708.4 5974.2 6903.7 7705.7 8864.1 8158.1 10723 7677.2 9915.3 8832.9 6530 8785.4 6100.2 4754.9 5297.5 6716.6 6181 6967.9 7641.9 6222.2 7159.7 7709 9081.3 8248.9 10830 8002.9 9904.8 8859.5 6296.2 8336.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53398000 6670 2078 6321 12663 10220 10220 1 9606 Homo sapiens 0.07066329752842648 ELDSITPEVLPGWK Unmodified 1582.8243 0.82427405 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 0 0 6 0.816 1 1 1 63.036 63.079 3 2.8888E-12 19509 20230619_1886_Aki_TMTPro18x_K_F6 189.33 161.46 218130 190750 208340 245740 222790 259530 242590 272930 253230 264890 235330 224200 281940 213620 256370 262280 250960 245290 201710 175040 212920 243800 230900 261630 243880 277570 256880 266820 244300 229150 284860 223430 260870 261840 240130 233180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 586550000 6671 3954 6322 12664;12665;12666 10221;10222 10222 2 9606 Homo sapiens 0.056174884836536876 ELDSQLNEPR Unmodified 1199.5782 0.57823012 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPW9;A0A8V8TPX4;A0A8V8TRC7;H7C3P6;A0A3B3ITD8 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 1 0 1 41.734 41.734 2 0.03728 10841 20230619_1880_Aki_TMTPro18x_K_F1 65.305 40.97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6672 1852 6323 12667 10223 10223 1 9606 Homo sapiens -0.013575865755228733 ELDTVTLEDIK Unmodified 1274.6606 0.66056277 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 3.5 0.5 1 1 59.784 59.8 3 1.2316E-06 18332 20230619_1882_Aki_TMTPro18x_K_F3 160.18 109.09 204700 166750 174440 196170 186620 226700 214410 204880 235400 238550 233350 222870 246980 204840 231060 282990 237720 250500 189040 152920 180070 196090 193870 226400 215200 211720 238620 238830 240060 226490 250850 216020 235900 281150 227480 238230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 264890000 6673 2361 6324 12668;12669 10224;10225 10224 2 9606 Homo sapiens 0.03421890712775166 ELDVEEAHAASTEEK Unmodified 1656.7479 0.74787422 1436 A0A384MTI8;Q96C86;Q53G42 DCPS m7GpppX diphosphatase yes no 0 0 0 1.5 0.5 1 1 42.655 42.695 3 1.0505E-10 11038 20230619_1881_Aki_TMTPro18x_K_F2 156.96 144.6 149200 127680 156390 178570 208670 265410 226680 228160 268380 222180 276190 267080 238280 192920 226070 256360 282840 264810 138050 117280 159280 177180 213380 260760 228730 235430 271090 226290 281250 266690 243800 204820 233390 256970 269950 251490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 338850000 6674 1436 6325 12670;12671 10226;10227 10227 2 9606 Homo sapiens -0.054229798742653657 ELDYFAK Unmodified 884.42798 0.42798405 1199 P07205;A0A140VJR3;V9HW85 PGK2;HEL-S-272 Phosphoglycerate kinase 2;Phosphoglycerate kinase yes no 0 0 0 5 0 1 52.587 52.66 2 0.021834 14892 20230619_1885_Aki_TMTPro18x_K_F5 102.71 21.417 158710 146670 143450 159820 150280 159830 165340 163900 170260 199170 219820 219020 240730 198290 199120 244160 258380 266440 146760 134350 147190 160380 155930 161800 166050 168130 175270 199930 224080 220810 243040 207710 206730 245720 246700 252800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44343000 6675 1199 6326 12672 10228;10229 10228 2 9606 Homo sapiens -0.018852817765264263 ELEAELEDERK Unmodified 1359.6518 0.65178899 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 1 1.5 0.5 1 1 46.846 46.884 3 2.639E-06 13069 20230619_1880_Aki_TMTPro18x_K_F1 163.83 146.16 190710 148520 170160 155580 181700 214970 195090 190090 250790 248270 248590 237750 283310 229840 240280 317420 283280 251500 176140 136090 174670 157420 188440 212330 197640 197390 252330 247550 256560 241750 285970 241930 247880 313670 270410 239690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 249270000 6676 3549 6327 12673;12674 10230 10230 1 9606 Homo sapiens -0.013650829237349171 ELEAENYHDIK Unmodified 1359.6307 0.63065962 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 2.5 1.12 1 1 1 1 43.754 43.803 3 2.8171E-05 11548 20230619_1881_Aki_TMTPro18x_K_F2 137.95 104.54 403930 332000 398380 418210 470490 536410 536140 534120 644950 563530 621340 625760 670170 533770 529680 682920 670060 636510 373470 304660 406470 416830 485000 533290 539990 546460 649670 569980 640600 629540 675640 561560 549670 680840 639520 605170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 994670000 6677 2337;3778;3779 6328 12675;12676;12677;12678 10231;10232 10231 2 9606 Homo sapiens -0.03477048232571178 ELEAFREELK Unmodified 1262.6507 0.65066678 2239 B2R6S9;P30533;A8K8F6 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes no 0 0 1 4 0 1 53.051 53.071 3 0.030638 15371 20230619_1883_Aki_TMTPro18x_K_F4 60.509 32.421 260470 248820 259020 267570 258530 299540 298990 279860 353540 358770 349970 338560 403960 305970 349420 417530 384830 424630 241090 227860 263320 269210 269820 300100 300780 289400 357080 357780 361500 343640 407750 322830 358620 417940 368140 403100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 338060000 6678 2239 6329 12679 10233 10233 1 9606 Homo sapiens 0.029847474980442712 ELEAHSAEAR Unmodified 1111.5258 0.52580062 4412 Q9BQG0;Q9BQG0-2;I3L1L3 MYBBP1A Myb-binding protein 1A yes no 0 0 0 1 0 1 29.111 29.111 3 6.0871E-10 5629 20230619_1880_Aki_TMTPro18x_K_F1 200.68 142.82 35174 22780 42935 44136 65159 60017 49626 54812 56156 41868 53874 57790 51893 50715 54525 28101 62198 57591 32542 21040 43294 42986 65395 59351 51154 55991 56713 43515 55336 57650 53199 51360 55667 30349 59405 54404 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51129000 6679 4412 6330 12680 10234 10234 1 9606 Homo sapiens -0.025501249184799235 ELEAQEAR Unmodified 944.45632 0.45632407 92 A0A024R0H6;Q8N7H5-3;Q8N7H5-2;Q8N7H5;M0QYC7 PAF1 RNA polymerase II-associated factor 1 homolog yes no 0 0 0 1 0 1 33.763 33.763 2 0.01524 7482 20230619_1880_Aki_TMTPro18x_K_F1 93.267 38.491 27745 14309 32809 33134 45510 54263 35598 48052 42969 27142 40170 50691 35393 37012 41750 21474 50952 48786 25634 13273 33103 32152 46031 53062 36730 48916 43185 29280 41223 49874 36634 37801 42732 23428 48647 46055 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30372000 6680 92 6331 12681 10235 10235 1 9606 Homo sapiens -0.018125838672403916 ELEASEELDTICPK Unmodified 1632.7553 0.75526779 1180 A0A140VJK1;O76003 GLRX3 Glutaredoxin-3 yes no 0 0 0 2 0 1 56.01 56.028 3 8.252E-12 17041 20230619_1881_Aki_TMTPro18x_K_F2 180.09 161.72 112930 97544 114860 123270 96401 129060 121470 125350 139120 151490 125140 136110 155690 128050 124340 183270 146630 151100 104480 89499 116320 122450 102450 129920 121600 128990 140320 151220 130450 138630 156450 135260 128550 181300 140110 143840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268370000 6681 1180 6332 12682 10236 10236 1 9606 Homo sapiens -0.035799635982129985 ELEATVR Unmodified 816.43413 0.43413207 4139 Q702N8-2;Q702N8 XIRP1 Xin actin-binding repeat-containing protein 1 yes no 0 0 0 1.5 0.5 1 1 37.03 37.06 2 0.006381 8520 20230619_1881_Aki_TMTPro18x_K_F2 133.47 18.883 437180 227330 472400 468630 566820 651020 483230 565670 549740 395050 664070 703610 519480 554630 713870 240480 664010 795550 403590 210420 478330 455370 579240 641900 494590 579060 559870 417970 670270 694600 544590 560600 717100 279320 636710 749260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 540360000 6682 4139 6333 12683;12684 10237 10237 1 9606 Homo sapiens 0.018572364549982012 ELEDATETADAMNR Oxidation (M) 1580.6624 0.66243003 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 1 0 1 0 1 41.493 41.493 3 4.2405E-05 10761 20230619_1880_Aki_TMTPro18x_K_F1 97.508 92.229 50845 47943 53332 55676 69540 72344 64312 70614 95587 45103 58935 54309 48021 46806 55854 53101 63382 57635 47079 43939 54225 55822 70824 71858 66089 71550 93953 47329 61688 54519 49801 48835 57056 53527 60531 54715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116920000 6683 148 6334 12685 10238 10238 69 1 9606 Homo sapiens -0.10467468331580676 ELEDATETADAMNR Unmodified 1564.6675 0.66751541 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 0 1 0 1 47.567 47.567 3 1.0167E-37 13327 20230619_1880_Aki_TMTPro18x_K_F1 232.5 212.76 60007 44156 50460 56596 53069 69024 63372 60831 74986 77350 71230 72499 81618 61057 70295 87570 83002 90579 55379 40545 52148 56282 55313 68635 63644 63146 75626 77143 73718 73440 82391 64817 72479 87679 79346 85973 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185290000 6684 148 6334 12686 10239 10239 1 9606 Homo sapiens -0.09223164468971845 ELEDFEMK Unmodified 1039.4532 0.45321253 902 A0A090N7X1;A0A090N7Y2;Q9UG63;Q9UG63-2;C9JHK9;C9JZV3 ABCF2 ATP-binding cassette sub-family F member 2 yes no 0 0 0 2 0 1 55.576 55.597 2 0.049348 16821 20230619_1881_Aki_TMTPro18x_K_F2 78.149 65.793 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6685 902 6335 12687 10240 10240 1 9606 Homo sapiens -0.06493595036272382 ELEDLEGYQNTIVAGSLITK Unmodified 2192.1212 0.12124393 1683 A0A8Q3SIG7;A0A8V8TM87;A0A8V8TM61;F5H578;A0A7N4I394;O75400-2;O75400;Q05C41;B4DPY2;H7C2N3 PRPF40A Pre-mRNA-processing factor 40 homolog A yes no 0 0 0 5 0 1 63.416 63.462 3 1.21E-07 19514 20230619_1885_Aki_TMTPro18x_K_F5 97.083 80.203 26680 23846 23340 28650 23820 29798 27563 26178 40943 24920 25335 25822 22918 22763 25283 29237 25909 26747 24659 21866 24032 28546 24865 29955 27969 26973 40274 25320 26628 26078 23612 23904 25726 29127 24789 25427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96574000 6686 1683 6336 12688 10241 10241 1 9606 Homo sapiens 0.0728681605910424 ELEDLLSPLEELVK Unmodified 1625.8764 0.8763692 38 A0A024QZF1;P37198;M0QXN5 hCG_19665;NUP62 Nuclear pore glycoprotein p62 yes no 0 0 0 5 0 1 67.204 67.246 3 0.013453 21112 20230619_1885_Aki_TMTPro18x_K_F5 62.891 37.713 11537 9320.5 11234 11759 9299.6 13692 10830 11675 9837 11995 13979 11941 12834 13076 14374 12356 13025 16026 10665 8553.7 11414 11699 9877.7 13642 10813 12073 10247 12103 14089 12172 13218 13411 14504 12641 12496 15172 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6330800 6687 38 6337 12689 10242;10243 10243 2 9606 Homo sapiens 0.0884660710676144 ELEDPHAK Unmodified 937.45051 0.45051041 3272 Q5SQH4;O60231;A0A1U9X7L7;A0A1U9X7L6;B4DZ28;Q9P186;Q5SQH5;A0A140T8Y5 DBP2;DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 0 0 0 2 0 2 35.787 35.844 3 0.003394 7997 20230619_1881_Aki_TMTPro18x_K_F2 91.318 68.578 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6688 3272 6338 12690;12691 10244;10245 10244 2 9606 Homo sapiens -0.02071682378903006 ELEEAMAGER Unmodified 1133.5023 0.50228799 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 0 0 1 0 1 45.821 45.821 2 0.0090197 12665 20230619_1880_Aki_TMTPro18x_K_F1 80.986 37.903 73175 55778 72011 83083 73468 80722 80207 82549 111410 105810 116730 121640 114980 101930 92151 109410 126500 133240 67625 51295 73336 81593 76430 81826 81457 84840 111920 106190 119420 122050 116380 106200 96098 111110 120750 126280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50829000 6689 1473 6339 12692 10246 10246 1 9606 Homo sapiens -0.05912306747291041 ELEEDFIK Unmodified 1021.4968 0.4967919 1447 Q14019;A0A384MTY2;H3BT58 COTL1 Coactosin-like protein yes no 0 0 0 2 0.816 2 2 2 55.71 55.73 2;3 0.00058192 16699 20230619_1880_Aki_TMTPro18x_K_F1 160.75 97.266 498020 414970 464320 437560 613020 759640 805100 728590 845450 849940 909950 816470 880590 749980 773440 993540 850860 899910 460300 380140 476950 444540 630680 742820 801300 749290 861460 851520 928590 828780 894580 788600 793920 988610 813680 855560 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3839599999.9999995 6690 1447 6340 12693;12694;12695;12696;12697;12698 10247;10248;10249 10247 3 9606 Homo sapiens -0.013096622674765968 ELEEEAEEEQR Unmodified 1389.5896 0.58958267 4501 Q9H2J4 PDCL3 Phosducin-like protein 3 yes yes 0 0 0 1 0 1 40.443 40.443 2 1.1126E-57 10275 20230619_1880_Aki_TMTPro18x_K_F1 300.09 281.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6691 4501 6341 12699 10250 10250 1 9606 Homo sapiens -0.08962854062724546 ELEEELK Unmodified 888.44403 0.44402805 856 A0A669KB35;Q9UPT6;A0A087WYG2;B7ZMF3;E9PFH7;A8K9K3;Q5JU32;A8K7M6;Q8N5H7-5;Q8N5H7-4;Q8N5H7;Q8N5H7-6;Q8N5H7-2 MAPK8IP3;SH2D3C C-Jun-amino-terminal kinase-interacting protein 3;SH2 domain-containing protein 3C yes no 0 0 0 1 0 1 48.647 48.647 2 0.0074614 13830 20230619_1880_Aki_TMTPro18x_K_F1 125.01 13.972 70997 56613 62104 75582 48914 55225 60213 63158 76251 77644 90425 102530 87095 76921 60155 84026 106820 105090 65570 51989 63702 74490 52213 57570 60597 64410 77318 78423 91994 102030 87776 80567 64347 85430 101740 99598 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18879000 6692 856 6342 12700 10251 10251 1 9606 Homo sapiens -0.004656203302829454 ELEEETNAFNR Unmodified 1350.6052 0.60517315 886 A0A087X142;B7ZVZ1;A6NMH6;A6NFQ9;F8W8I8;Q92599-3;Q92599-2;Q92599-4;Q92599 SEPT8 Septin-8 yes no 0 0 0 1 0 1 46.288 46.288 2 8.6876E-12 12834 20230619_1880_Aki_TMTPro18x_K_F1 210.27 183.68 22882 16829 22193 22840 24447 30122 26483 27000 34090 32336 32573 36733 34602 28904 30907 34367 33867 38675 21140 15462 22645 22662 25307 29822 26818 27934 34241 32531 33605 36806 35073 30369 31678 34679 32409 36670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40872000 6693 886 6343 12701 10252 10252 1 9606 Homo sapiens -0.05610522755000602 ELEEEVNNFQK Unmodified 1377.6412 0.64122431 1492 D6RGI3;A0A384P5S0;D6RER5;Q9NVA2;Q9NVA2-2;Q96KC0;H0Y961;H0Y9G8 SEPT11 Septin-11 yes no 0 0 0 2 0.707 1 2 1 53.514 53.541 2;3 0.00023229 15938 20230619_1881_Aki_TMTPro18x_K_F2 108.47 95.489 62916 56322 58487 70668 61379 71515 68689 78663 86581 70957 80006 79726 84970 86023 83055 79533 87771 100710 58177 51666 59905 70195 63788 72400 69407 79642 86873 72428 82621 80772 86570 88157 84733 81232 84022 95382 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 456810000 6694 1492 6344 12702;12703;12704;12705 10253;10254 10253 2 9606 Homo sapiens -0.03249065578143018 ELEEEWVK Unmodified 1060.5077 0.50769094 3873 Q14008-2;Q14008;Q14008-3;Q8NAH3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 2 0 1 54.235 54.259 2 0.0042389 16286 20230619_1881_Aki_TMTPro18x_K_F2 117.04 42.735 88392 82291 94018 91161 75257 100250 94167 84090 103040 119450 112140 108980 127030 99147 107120 129010 119660 122970 81847 75388 94760 91485 80282 100310 94150 87999 104940 118510 115250 110790 128170 104230 110090 128760 114390 116850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46546000 6695 3873 6345 12706 10255 10255 1 9606 Homo sapiens -0.020142598931897737 ELEEIVQPIISK Unmodified 1396.7813 0.7813466 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 5.67 1.25 1 1 1 62.749 62.78 3 0.00012104 19501 20230619_1883_Aki_TMTPro18x_K_F4 108.35 82.23 153010 119180 134060 147280 128270 167420 155810 168710 186160 190570 170480 183990 202320 175400 205470 206160 193790 210380 141300 109370 137790 146700 134720 167720 156470 172780 187420 191220 177190 186750 205640 182850 208240 206920 185650 199720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 556380000 6696 3429 6346 12707;12708;12709 10256;10257 10256 2 9606 Homo sapiens 0.09882718426229076 ELEELSLEAQGIK Unmodified 1457.7613 0.76133944 817 Q8N5A0;A0A087WUT6;O60841;A0JLR8;Q05CQ1 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 0 3 0 1 61.654 61.683 3 4.6043E-13 19093 20230619_1882_Aki_TMTPro18x_K_F3 177.16 146.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6697 817 6347 12710 10258 10258 1 9606 Homo sapiens 0.05076922695616304 ELEEQFALEAGGYQAGAAR Unmodified 2008.949 0.94903365 2433 B3KWQ6;P41219;P41219-2;H7C5W5 PRPH Peripherin yes no 0 0 0 3 0.816 1 1 1 58.669 58.684 3 1.0371000000000001E-24 18048 20230619_1881_Aki_TMTPro18x_K_F2 203.06 192.97 164300 126890 165940 147730 119640 152140 173800 167430 205280 172220 197980 159640 176130 166620 171020 232410 209020 191200 151880 116380 167660 147660 129560 153840 173110 170120 206840 173500 202250 163190 180380 175000 176440 230000 199500 182110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1464899999.9999998 6698 2433 6348 12711;12712;12713 10259;10260 10259 2 9606 Homo sapiens -0.01508290837750792 ELEEREIDDTYIEDAADVDAR Unmodified 2466.1034 0.10342162 2446 Q99459;B3KY60;B4DSH1 CDC5L Cell division cycle 5-like protein yes no 0 0 1 1 0 1 55.17 55.17 3 9.4753E-10 16490 20230619_1880_Aki_TMTPro18x_K_F1 120.71 111.61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6699 2446 6349 12714 10261 10261 1 9606 Homo sapiens -0.07098595724346524 ELEEWYAR Unmodified 1094.5033 0.50327426 3421 P09496-2;P09496-4;P09496-3;P09496;F8WF69;C9J8P9;P09496-5 CLTA Clathrin light chain A yes no 0 0 0 2 0.816 1 1 1 51.981 52.015 2 0.00077368 15309 20230619_1881_Aki_TMTPro18x_K_F2 156.4 135.5 862390 741580 827440 878780 857060 1019600 950620 981660 1132700 1082000 1014100 1044500 1144300 923330 972910 1201400 1151300 1122700 797410 679990 844340 878170 891270 1019400 958760 1007900 1139200 1087100 1051900 1058000 1155500 971320 1003400 1197800 1099600 1067300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 722270000 6700 3421 6350 12715;12716;12717 10262;10263 10262 2 9606 Homo sapiens -0.0401972431611739 ELEEYLEK Unmodified 1051.5074 0.50735659 395 A0A024R6H0;Q9P2I0;B3KMI0;B3KN45 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes no 0 0 0 2.5 0.5 1 1 56.89 56.914 2 0.034318 17186 20230619_1882_Aki_TMTPro18x_K_F3 76.221 20.545 47934 35175 47019 44476 40436 51459 44166 46212 57389 42812 38787 39393 44432 39095 47981 47764 43626 50621 44288 32294 47727 44250 42702 51364 44738 47475 56948 43385 40938 40150 45351 40802 48489 48019 41832 48024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31522000 6701 395 6351 12718;12719 10264 10264 1 9606 Homo sapiens -0.016336796130417497 ELEEYRR Unmodified 993.48796 0.48795855 1741 P35611-3;E7EV99;P35611;P35611-4;P35611-6;P35611-2;A0A804HL01;E7ENY0;H0Y9H2;Q4TT76;Q16155;H0YG19 ADD1;LA04NC01-25A3.2-001;ADDA Alpha-adducin yes no 0 0 1 2.5 0.5 1 1 33.021 33.086 3 0.0082023 6925 20230619_1881_Aki_TMTPro18x_K_F2 98.418 26.28 36823 28938 32460 44524 41496 49341 41041 39949 54393 47697 55848 60505 47031 48782 46813 50003 63478 63193 34007 26620 33551 43698 42437 49286 41810 41688 54680 48201 56872 60415 48349 50741 48543 50961 60572 59883 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60147000 6702 1741 6352 12720;12721 10265 10265 1 9606 Homo sapiens -0.009045911132830042 ELEFLSMANVELSSLAR Unmodified 1907.9663 0.96626362 3989 Q53F20;Q9BTT0;Q5TB19;B4E0D5;E9PLC4;Q9BTT0-2 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes no 0 0 0 7 0 1 66.033 66.058 2 1.8871E-06 20526 20230619_1887_Aki_TMTPro18x_K_F7 113.65 89.357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6703 3989 6353 12722 10266 10266 1 9606 Homo sapiens 0.04859913443692676 ELEFYLR Unmodified 968.49673 0.49673232 3707 Q5JR94;P62241;Q5JR95;Q9BS10 RPS8 40S ribosomal protein S8 yes no 0 0 0 4 0.816 1 1 1 57.127 57.16 2 0.0061651 17125 20230619_1883_Aki_TMTPro18x_K_F4 140.53 74.269 3202100 2712200 2919600 3191600 2823300 3157400 3236700 3290200 3553500 3247300 3043800 2774500 3476800 2806900 3214200 3676000 3117700 3166700 2959400 2486900 2989500 3184000 2952400 3198900 3249800 3351000 3582300 3270400 3164500 2841600 3521200 2940800 3270300 3650400 2984200 3012900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1694499999.9999998 6704 3707 6354 12723;12724;12725 10267;10268;10269 10267 3 9606 Homo sapiens 0.011223825231809315 ELEGVITK Unmodified 887.4964 0.49639797 3285 O60763;O60763-2 USO1 General vesicular transport factor p115 yes no 0 0 0 4.5 0.5 1 1 50.749 50.803 2 0.018728 14359 20230619_1883_Aki_TMTPro18x_K_F4 97.635 23.704 132090 99455 119400 126400 143290 162750 152730 160250 198920 160450 194030 184490 189190 154430 164510 208380 196020 196500 121980 91305 122760 125920 147340 161720 154860 163830 199660 162940 198990 185330 192060 163140 169700 207740 187250 186760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143600000 6705 3285 6355 12726;12727 10270 10270 1 9606 Homo sapiens 0.048149628033343106 ELEHALEK Unmodified 967.49746 0.4974606 1501 A0A8I5KXV4;F5H345;A0A3B3IRR1;A0A3F2YNY7;P08397-4;P08397-3;P08397-2;P08397;A0A3B3IU56;F5GY90;A0A1W2PNU5;A0A3B3IU34;F5H0P4;F5H226 HMBS Porphobilinogen deaminase yes no 0 0 0 4 0 1 44.12 44.164 3 0.018765 11344 20230619_1883_Aki_TMTPro18x_K_F4 75.378 33.269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6706 1501 6356 12728 10271 10271 1 9606 Homo sapiens 0.01241177172244079 ELEHMVR Oxidation (M) 928.44365 0.44365089 3972 Q496C9;Q8TEA8;A0A2R8YCT7;A0A2R8Y6X2;A0A087WZV9 DTD1 D-tyrosyl-tRNA(Tyr) deacylase;D-tyrosyl-tRNA(Tyr) deacylase 1 yes no 0 1 0 2 0 1 29.031 29.102 3 0.010739 5410 20230619_1881_Aki_TMTPro18x_K_F2 86.472 54.167 107310 67378 96602 105080 124380 116140 100910 108000 122850 106920 140660 141260 134910 115110 123870 97792 150830 133360 99000 62052 99445 103110 126270 116430 103840 110880 124560 109180 143220 140900 137350 118720 127480 100650 143930 126350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81586000 6707 3972 6357 12729 10272 10272 2629 1 9606 Homo sapiens -0.02343318531109162 ELEHMVR Unmodified 912.44874 0.44873627 3972 Q496C9;Q8TEA8;A0A2R8YCT7;A0A2R8Y6X2;A0A087WZV9 DTD1 D-tyrosyl-tRNA(Tyr) deacylase;D-tyrosyl-tRNA(Tyr) deacylase 1 yes no 0 0 0 3 0.816 1 1 1 36.588 36.641 3 0.00022073 8219 20230619_1882_Aki_TMTPro18x_K_F3 178.84 158.29 166660 113410 138500 146270 158420 159180 152880 153800 192210 192500 204960 211800 209750 175120 179400 200740 227770 205600 153720 104180 143350 145190 162840 159900 155720 158530 194140 193060 209900 212840 212490 183210 185740 201540 217300 195310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 223750000 6708 3972 6357 12730;12731;12732 10273;10274 10274 2 9606 Homo sapiens -0.01099014668500331 ELEIEER Unmodified 916.45018 0.45017606 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 1 0 1 41.981 41.981 2 0.0024616 10955 20230619_1880_Aki_TMTPro18x_K_F1 161.6 18.376 416140 283510 328010 388600 422000 490950 435970 435950 604160 452930 531780 528050 565560 459180 398900 578120 592650 568880 383720 260600 342370 384960 432000 487240 443770 449590 602530 459520 550160 530600 568300 482250 420230 577980 565000 540510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 371020000 6709 3152 6358 12733 10275 10275 1 9606 Homo sapiens -0.011391020987502998 ELEIEERER Unmodified 1201.5939 0.59388018 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 1 0 1 36.797 36.797 3 3.9621E-05 8698 20230619_1880_Aki_TMTPro18x_K_F1 156.83 27.969 106770 101310 90148 91660 136950 98351 107580 115740 117740 103260 104170 87009 103670 81875 92068 125340 125600 89308 98701 92649 93594 93569 137390 99566 110500 116650 118870 104530 107370 89043 105280 86910 95847 123150 119600 85340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63181000 6710 3152 6359 12734 10276 10276 1 9606 Homo sapiens 0.0011469994153685548 ELEIESQTEEQPTTK Unmodified 1760.8316 0.83160385 4630 Q9NYH9;B3KX32;B3KQ21;B4DSL9 UTP6 U3 small nucleolar RNA-associated protein 6 homolog yes no 0 0 0 1 0 1 48.133 48.133 3 1.6026E-14 13595 20230619_1880_Aki_TMTPro18x_K_F1 188.92 102.42 18030 15415 19134 19807 23842 25426 27816 22970 27001 26728 29240 27870 28862 24501 24400 29776 31817 31950 16685 14146 19426 19713 24478 25229 27774 23745 27641 26849 29867 28136 29263 25668 25329 29943 30371 30322 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44803000 6711 4630 6360 12735 10277 10277 1 9606 Homo sapiens -0.01837868497227646 ELEIGQAGSQR Unmodified 1186.5942 0.59421454 2356 B4E0B7;B3KMS0;Q15021;B3KY03 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 2.5 0.5 1 1 41.223 41.291 2 6.611E-09 10152 20230619_1882_Aki_TMTPro18x_K_F3 187.16 156.59 168900 125430 151260 145210 158190 189510 164690 154180 180430 204970 228400 221580 236210 192920 175880 223950 247110 215620 155960 115050 155200 145630 164110 187460 166210 161310 184940 204920 232290 223240 237940 201600 184090 223970 235530 205000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142270000 6712 2356 6361 12736;12737 10278;10279 10279 2 9606 Homo sapiens 0.008381196613754582 ELELLGR Unmodified 828.47052 0.47051757 2433 B3KWQ6;P41219;P41219-2;F8W835 PRPH Peripherin yes no 0 0 0 4 0.816 1 1 1 51.264 51.322 2 0.022597 14547 20230619_1883_Aki_TMTPro18x_K_F4 101.69 12.322 658980 521640 521020 587700 459950 544720 545430 551630 634900 733670 776680 827820 822880 768820 830330 862480 866010 942270 608160 478240 540210 587680 485650 554390 548050 568110 647790 734450 792730 833990 839150 799730 846370 869620 828780 893840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2038399999.9999998 6713 2433 6362 12738;12739;12740 10280;10281 10281 2 9606 Homo sapiens 0.049421133517171256 ELENANDLLSATK Unmodified 1416.7096 0.70963822 3440 P12270;P12270-2;Q58F23;Q504U6;A0PJC9 TPR Nucleoprotein TPR yes no 0 0 0 4 0.816 1 1 1 56.523 56.558 3 9.2817E-05 16899 20230619_1883_Aki_TMTPro18x_K_F4 102.9 81.209 69173 58079 67245 75471 64655 72001 75314 59773 70545 71070 77659 71722 88815 65831 74329 87384 88290 89935 63958 53310 68484 74719 67629 72795 75161 62293 72435 71258 79793 72637 89544 69295 76679 87564 84352 85388 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 246850000 6714 3440 6363 12741;12742;12743 10282 10282 1 9606 Homo sapiens 0.017951790017150415 ELENWAGSM Oxidation (M) 1051.4281 0.42806041 4512 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 1 0 1.5 0.5 1 1 55.064 55.074 2 7.2275E-06 16616 20230619_1881_Aki_TMTPro18x_K_F2 174.69 151.11 75614 58721 70167 85066 62881 55858 80242 76610 55980 195530 222910 240470 260730 208030 141000 230080 277000 291470 69855 53980 71698 83344 66184 59231 79297 80054 65553 192310 222450 240860 259160 216970 153480 234000 263820 276140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30303000 6715 4512 6364 12744;12745 10283 10283 2803 1 9606 Homo sapiens -0.09559649838843143 ELEPEAAEEALENGPK Unmodified 1724.8105 0.81047448 257 A0A024R3P9;Q9H3P7 ACBD3 Golgi resident protein GCP60 yes no 0 0 0 1.5 0.5 1 1 57.41 57.41 3 5.2379E-08 17448 20230619_1880_Aki_TMTPro18x_K_F1 90.376 74.983 28411 20592 27701 27747 24651 30611 33693 28788 31993 31856 28437 31350 31686 30911 35757 37017 36393 33595 26246 18919 28162 27470 26103 30681 33385 29632 32558 32021 29527 31832 32462 32200 36329 36910 34795 31955 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97335000 6716 257 6365 12746;12747 10284;10285 10284 2 9606 Homo sapiens -0.02293833806083967 ELEPEMEFEIEPDK Oxidation (M) 1749.7655 0.76549812 4506 Q9H307;B4DTD4;B4E392 PNN Pinin yes no 0 1 0 1.5 0.5 1 1 57.836 57.843 3 0.00044684 17629 20230619_1880_Aki_TMTPro18x_K_F1 88.075 71.409 28048 23009 26525 29652 24971 32955 31582 30784 34198 32294 29974 32662 32280 28118 30981 35481 32017 36394 25924 21120 27077 29437 26282 33007 31539 31643 34527 32571 31077 32981 32818 29544 31611 35574 30654 34541 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106280000 6717 4506 6366 12748;12749 10286 10286 2800 1 9606 Homo sapiens -0.07939400663644847 ELEQANDDLER Unmodified 1330.6001 0.60008777 4622 Q9NXR1-1;Q9NXR1;X5DR54;A0A6Q8PEY3;X5DP35;A0A6Q8PGV6;I3L3G9;A0A6Q8PG46;I3L522;A0A6Q8PHH1;I3L2S8;A0A0J9YYF5 NDE1 Nuclear distribution protein nudE homolog 1 no no 0 0 0 1 0 1 42.225 42.225 2 0.0065735 11099 20230619_1880_Aki_TMTPro18x_K_F1 82.505 59.675 14848 11690 13497 16772 18276 23254 17743 19468 29842 17164 22250 20085 21646 15994 17419 18333 28472 24116 13716 10745 13920 16591 18643 22919 18285 20081 29362 17588 23133 20131 21910 16776 18398 18705 27104 22861 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25874000 6718 4622 6367 12750 10287 10287 1 9606 Homo sapiens -0.0519882661765223 ELEQEEEER Unmodified 1189.5099 0.50987578 4306;1596 A0A669KB12;Q09472;Q7Z6C1;B5A227;Q92793-2;Q92793;O60424;B4E3L4 EP300;CREBBP;CBP Histone acetyltransferase p300;CREB-binding protein no no 0 0 0 1 0 1 35.469 35.469 2 0.0018122 8184 20230619_1880_Aki_TMTPro18x_K_F1 112.3 86.721 29857 14644 35102 35470 38989 55479 34379 41204 49632 30760 55862 58165 46753 40662 41386 22579 61254 57113 27579 13599 35294 34317 40182 54171 35433 42787 49834 32516 56619 57171 47768 41595 43163 24977 58387 53895 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38748000 6719 1596;4306 6368 12751 10288 10288 1 9606 Homo sapiens -0.07729875946029097 ELEQEREDQK Unmodified 1302.6052 0.60517315 3322 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 0 0 1 1 0 1 34.702 34.702 3 0.0033012 7866 20230619_1880_Aki_TMTPro18x_K_F1 81.92 45.335 50928 19709 61725 65664 91538 101180 70609 92679 79651 51532 84802 90416 73426 72826 74388 33912 83895 80815 47019 18467 62274 62895 92141 99296 72751 94092 80713 55493 86311 89368 75409 73640 75917 37480 80157 76273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86340000 6720 3322 6369 12752 10289 10289 1 9606 Homo sapiens -0.03402522755004611 ELEQLFSQYGR Unmodified 1368.6674 0.66737948 1058;945 P26378-4;A0A494C0F8;P26378;P26378-3;P26378-1;P26378-5;P26378-2;A0A494C147;B1APY9;A0A494C1D9;A0A0R4J2E6;B7Z5E0;A0A494C015;A0A494C173;A0A0A0MRX1;Q12926-2;Q12926;B1AM48;C9JB16 ELAVL4;ELAVL2 ELAV-like protein 4;ELAV-like protein;ELAV-like protein 2 no no 0 0 0 6.5 0.5 1 1 62.22 62.256 3 1.6645E-17 18820 20230619_1887_Aki_TMTPro18x_K_F7 234.9 214.61 58951 53768 59533 66683 51515 55166 59982 54156 66010 72004 67365 58586 63318 54326 62647 71445 66910 71978 54554 49314 60344 66129 54355 56655 60187 55914 66999 71401 68823 59963 64725 57102 64003 71520 64013 68341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 468690000 6721 1058;945 6370 12753;12754 10290;10291 10291 2 9606 Homo sapiens -0.0022075161600696447 ELEQVCNPIISGLYQGAGGPGPGGFGAQGPK Unmodified 3054.4869 0.48691928 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4E1T6 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 1 0 2 63.145 63.145 3;4 1.4293999999999998E-21 19761 20230619_1880_Aki_TMTPro18x_K_F1 147.16 128.28 33463 28814 32178 48024 43102 52687 51537 47579 47923 52859 49456 45587 52350 43475 45419 67139 59303 58639 30942 26524 33074 46920 44151 52763 51336 49112 49125 52912 50774 46590 53019 46168 47195 66539 56602 55788 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 183460000 6722 1031 6371 12755;12756 10292;10293 10292 2 9606 Homo sapiens 0.04185529453252457 ELESSEEGGSAEER Unmodified 1507.6274 0.62742474 3151 J9JIC5;Q9HAS0;J3QKQ1;J3KRR1 C17orf75 Protein Njmu-R1 yes no 0 0 0 1 0 1 34.715 34.715 2 8.9821E-05 7885 20230619_1880_Aki_TMTPro18x_K_F1 110.66 85.003 5409.8 2203.3 5864.3 6523.2 9199.6 8596.3 6226.3 6722.2 7148 4897.6 8727.8 9443.3 7310.6 6768.1 6911.7 3632.8 9780.3 9365 4990.1 2057.6 5970.3 6248.2 9199.9 8487 6482.5 6949.8 7282 5189.1 8822.3 9282.1 7492.3 6907 7174.3 4033.1 9327.1 8835.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14770000 6723 3151 6372 12757 10294 10294 1 9606 Homo sapiens -0.10608387867864622 ELETENEER Unmodified 1147.4993 0.4993111 530 A0A024R8P4;Q9BSJ5-3;Q9BSJ5;I3L072;B7Z7E5;Q9BSJ5-2;J3KT60;J3KTJ7 C17orf80 Uncharacterized protein C17orf80 yes no 0 0 0 1 0 1 33.8 33.8 2 0.00067475 7515 20230619_1880_Aki_TMTPro18x_K_F1 127.4 104.33 8535 3639.1 13068 13390 16702 21326 14081 17617 16425 9967.3 15482 18793 17448 14926 19721 6008.8 20334 22540 7903.2 3416.8 12958 12801 17004 20844 14433 18038 16539 10761 16047 18523 17853 15074 19968 7150.6 19465 21226 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10389000 6724 530 6373 12758 10295 10295 1 9606 Homo sapiens -0.0685385860047063 ELETGPK Unmodified 772.39668 0.39668393 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;Q76MU0 CTTN;EMS1 Src substrate cortactin yes no 0 0 0 3 0 1 40.21 40.266 2 0.017198 9722 20230619_1882_Aki_TMTPro18x_K_F3 108.92 50.238 98136 61596 115800 119990 143450 161450 118380 151590 141380 113520 167030 190750 145290 133860 161590 88467 175760 193020 90747 56906 116600 116820 146150 159750 121660 154440 143600 119100 169410 188030 149800 137620 164400 95724 168150 182160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63048000 6725 1413 6374 12759 10296 10296 1 9606 Homo sapiens 0.0013814518938488618 ELEVAEGGK Unmodified 930.46583 0.46582612 437 A0A024R7B7;Q16543;Q6FG59;K7EQA9;K7EKQ2 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 0 0 1.5 0.5 1 1 44.709 44.751 3 0.0010287 12022 20230619_1881_Aki_TMTPro18x_K_F2 96.668 44.265 78561 49049 76424 80315 103140 115950 88196 108600 127150 84506 109180 111960 113200 91081 89822 68186 120010 130630 72520 45202 78236 78958 104710 114300 91025 110730 126470 87603 113010 111650 114280 93546 93287 72453 114610 123380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148240000 6726 437 6375 12760;12761 10297 10297 1 9606 Homo sapiens -0.0021881558169525306 ELEVLLMCNK Oxidation (M) 1263.6203 0.62029463 199 D3YTB1;A0A024R2G7;F8W727;P62910 RPL32 60S ribosomal protein L32 yes no 0 1 0 6 0.816 1 1 1 60.617 60.667 3 0.00013578 18384 20230619_1886_Aki_TMTPro18x_K_F6 119.75 87.738 141150 142500 150590 149020 142050 152590 149730 141960 153090 141080 98577 93858 137860 98240 157840 120590 106720 93021 130780 130450 152030 150090 148350 153880 150650 145760 153740 141230 105500 97559 140240 102470 157120 119420 102510 88694 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 205220000 6727 199 6376 12762;12763;12764 10298;10299 10298 123 2 9606 Homo sapiens -0.0009707048300242604 ELEVLLMCNK Unmodified 1247.6254 0.62538001 199 D3YTB1;A0A024R2G7;F8W727;P62910 RPL32 60S ribosomal protein L32 yes no 0 0 0 6.5 0.5 1 1 62.47 62.514 3 0.0026719 19216 20230619_1886_Aki_TMTPro18x_K_F6 79.974 56.598 246590 209890 231910 225710 186540 258750 259440 255300 264690 235740 153480 155820 250540 167240 188180 265030 225760 213010 227960 192290 236170 227220 199710 258980 257500 260470 265100 236920 166980 162320 249450 177530 194940 261590 215560 202910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 938250000 6728 199 6376 12765;12766 10300 10300 1 9606 Homo sapiens 0.011472333796291423 ELEVMTAK Oxidation (M) 935.46338 0.46338328 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;H0YFY6;Q96HN5;K4DIE0;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 1 0 4 0 1 43.862 43.906 2 0.031686 11257 20230619_1883_Aki_TMTPro18x_K_F4 72.23 37.406 44527 30884 38865 40912 43275 54883 45726 43912 47676 41339 53177 53929 45362 44487 51328 50042 54854 47392 41091 28376 40039 40661 44734 54157 46028 45557 48637 42316 53981 53870 46870 46449 52274 50065 52398 45068 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26924000 6729 349;3906 6377 12767 10301 10301 210 1 9606 Homo sapiens -0.006929873110038898 ELEVMTAK Unmodified 919.46847 0.46846866 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;H0YFY6;Q96HN5;K4DIE0;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 5 0 1 50.137 50.213 3 0.058906 13902 20230619_1885_Aki_TMTPro18x_K_F5 43.083 0.89246 31265 26138 30967 36750 35457 42924 36457 36648 48129 34057 39812 37557 39896 37152 38702 43712 47402 48154 28911 24013 31590 36299 36550 42771 37054 37809 47988 34706 41228 37989 40696 38676 39883 44053 45275 45687 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32904000 6730 349;3906 6377 12768 10302 10302 1 9606 Homo sapiens 0.005513165516049412 ELEVQHPAAK Unmodified 1120.5877 0.58767259 3621 Q53HU0;P50990;P50990-2;Q7Z759;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 4 0.816 1 1 1 37.887 37.95 3 6.4856E-05 8723 20230619_1882_Aki_TMTPro18x_K_F3 136.36 113.78 472930 362050 436190 430340 518930 512890 496230 490690 668740 516610 618870 554800 624640 505740 553520 581460 645170 548530 436840 332140 447270 430190 531780 512070 506930 503480 668970 522270 637010 560200 633860 527350 569270 581260 615740 521700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2899900000 6731 3621 6378 12769;12770;12771 10303;10304;10305 10303 3 9606 Homo sapiens 0.03220226500661738 ELFDELVK Unmodified 991.52261 0.52261272 1168 Q86U79;A0A140VJE0;P55263-2;P55263;P55263-3;A0A5K1VW54;A0A5K1VW94;A0A5F9ZH31;A0A5F9ZH72;A0A5F9ZH83 ADK Adenosine kinase yes no 0 0 0 4.17 1.07 2 2 1 1 61.989 62.017 2;3 0.0016547 19266 20230619_1882_Aki_TMTPro18x_K_F3 139.19 70.959 114300 98862 104770 120560 101230 121110 108460 117000 166700 134690 133620 143980 147680 138390 130290 160760 150990 167540 105650 90675 107270 119970 105840 122320 110750 120290 165140 135560 139310 145560 149580 144070 134110 161480 144380 159000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 306210000 6732 1168 6379 12772;12773;12774;12775;12776;12777 10306;10307 10306 2 9606 Homo sapiens 0.026512319748235313 ELFDVVANPLVNDLIHGK Unmodified 1992.068 0.068026571 1675 H7BYN4;A0A7I2V5Y5;Q02241-2;Q02241;A0A2U3TZL8;A0A2R8Y531;H0YME6;H0YMJ4 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 0 0 0 8 0 1 64.963 64.982 3 0.00010006 19942 20230619_1888_Aki_TMTPro18x_K_F8 88.133 74.706 7103.5 6810.9 8394.8 9278.6 8725 10744 9555.4 9759.6 11671 9851.6 10206 7188.8 12062 9687.3 8129.3 9383.6 9101.3 11550 6585.3 6251.9 8432.8 9183.3 9066.5 10725 9652 10038 11709 9879.3 10596 7515.2 12060 9905.2 8396.8 9552 8715.6 10938 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27521000 6733 1675 6380 12778 10308 10308 1 9606 Homo sapiens 0.11167527857742243 ELFESWCTDK Unmodified 1313.5598 0.55980286 3987 Q53F02;Q9UKF6;G5E9W3;B4DQR2;Q05BZ5 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes no 0 0 0 4.67 0.471 1 2 59.988 60.016 2;3 0.0017372 17895 20230619_1885_Aki_TMTPro18x_K_F5 73.885 56.291 80236 66302 80976 90117 70459 83687 77996 87678 103660 98346 87429 89767 93929 87102 80505 113630 100910 104490 74202 60890 82092 88953 74309 85178 79043 89568 103530 98574 90751 91451 95104 91304 83412 113150 96377 99328 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41968000 6734 3987 6381 12779;12780;12781 10309;10310;10311 10310 3 9606 Homo sapiens -0.0844346454175593 ELFQTPGTDKPTTDEK Unmodified 1805.8683 0.86832371 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 1 4.5 0.5 1 1 49.185 49.261 3 1.0382E-05 13439 20230619_1885_Aki_TMTPro18x_K_F5 107.34 94.784 71820 54774 69604 65094 41946 51911 53606 50336 62725 73668 76663 59483 86942 66602 65672 80121 76115 67709 66365 50249 70437 64748 46135 53468 53720 52190 63985 72774 78307 61342 87340 69215 67806 79567 72667 64472 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44598000 6735 3588 6382 12782;12783 10312;10313 10313 2 9606 Homo sapiens -0.0023757188068884716 ELFSNLQEFAGPSGK Unmodified 1622.794 0.79403656 122 B4DDW1;F8VQX6;A0A8Q3SIA8;H0YI09;A0A024R118;Q9H8H3 METTL7A Methyltransferase-like protein 7A yes no 0 0 0 8 0 1 62.358 62.383 3 5.3784E-14 18799 20230619_1888_Aki_TMTPro18x_K_F8 176.23 156.99 82817 66332 83873 88162 105280 127050 94552 96759 107430 100430 119930 132830 113670 123800 132090 111060 133920 164830 76577 60910 85472 87706 107470 124780 96382 101030 109190 102340 122320 133020 117270 127270 133980 114890 128330 155870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 817150000 6736 122 6383 12784 10314 10314 1 9606 Homo sapiens 0.00755129818480782 ELFSQFGK Unmodified 954.48108 0.48108226 1667 Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;H0Y5F5;H0YCC8 PABPC4 Polyadenylate-binding protein 4;Polyadenylate-binding protein no no 0 0 0 4.5 3.5 1 1 57.87 57.895 3 0.0040768 17627 20230619_1880_Aki_TMTPro18x_K_F1 93.992 70.036 180960 150690 156100 172700 157240 181580 185740 185820 220580 221710 192590 188380 216400 180590 188480 229070 219360 223320 167150 138140 160770 172760 164170 183060 186690 190470 221750 221150 199920 192510 218800 189160 194080 228970 209610 212150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 198080000 6737 1667 6384 12785;12786 10315;10316 10315 2 9606 Homo sapiens 0.002020960061599908 ELFVMAR Unmodified 864.45276 0.45275902 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8;Q59GS3;J3QSA9;J3KRP2;J3QQM1 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 7 0 1 52.906 52.976 2 0.015441 14918 20230619_1887_Aki_TMTPro18x_K_F7 111.28 85.169 100740 77448 95497 104580 81885 118950 111180 111820 132910 111190 98975 97476 99840 100740 117260 115080 107210 119810 93077 71142 97342 103540 87179 118930 111060 114700 132760 112050 103230 99707 102820 104520 118370 115690 102760 113700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43520000 6738 1202 6385 12787 10317 10317 1 9606 Homo sapiens 0.015110748252141093 ELGEDGLK Unmodified 859.42871 0.42871234 1437 A0A384MTJ7;P30837;B4DLJ0 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes no 0 0 0 2 0 1 46.071 46.15 2 0.0069758 12668 20230619_1881_Aki_TMTPro18x_K_F2 117.04 51.784 114140 82158 107680 120410 142080 154630 133980 129730 187900 125870 162370 179470 157450 138580 161130 149310 199150 196000 105420 75559 110520 118820 144740 153150 137170 134180 187110 129190 167700 178340 161120 144880 165810 152520 190150 185680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114790000 6739 1437 6386 12788 10318 10318 1 9606 Homo sapiens -0.006624871274652833 ELGELIPLR Unmodified 1038.6073 0.6073454 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;H0YFY6;Q96HN5;K4DIE0;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 5.5 0.5 1 1 60.388 60.443 2 0.00043766 18282 20230619_1886_Aki_TMTPro18x_K_F6 135.83 102.03 357060 317110 330060 368290 339610 434910 366070 377860 397940 402410 391810 387380 422120 371710 427390 395270 392120 441500 330130 290680 337970 368590 353260 433320 368660 390570 403530 404970 403700 393370 430130 385260 432400 399560 375860 418670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 308810000 6740 349;3906 6387 12789;12790 10319;10320 10320 2 9606 Homo sapiens 0.08958602511415847 ELGENLDQILR Unmodified 1298.683 0.68302954 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 4 0 1 59.44 59.442 2 1.7231E-08 18106 20230619_1883_Aki_TMTPro18x_K_F4 175.66 84.073 76716 57252 58512 74342 53870 65646 67098 64141 71806 83901 73486 81637 99599 86459 61699 104730 101280 112900 70759 52574 60984 73534 56772 66995 67038 66193 73054 83663 76476 83143 99076 90011 65830 105270 96598 107100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139040000 6741 4386 6388 12791 10321 10321 1 9606 Homo sapiens 0.04563534901035382 ELGENLPIEDR Unmodified 1283.6357 0.635745 2118 A8K8B0;P30154;P30154-2;P30154-4;P30154-3;B7Z1G3;P30154-5;H0YDG7 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 1 0 1 49.897 49.897 2 0.0002552 14318 20230619_1880_Aki_TMTPro18x_K_F1 124.46 82.227 52385 36070 39962 53171 44365 67839 54825 54879 75590 70515 66234 65429 82328 63261 51751 84776 72045 78079 48296 33182 41804 52431 46233 67117 55288 57365 75470 70312 69049 66607 82035 66495 54467 84367 68777 74208 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26010000 6742 2118 6389 12792 10322 10322 1 9606 Homo sapiens 0.0052725563004969445 ELGEYGLQAYTEVK Unmodified 1598.7828 0.78280317 1475 P05091;A0A384NPN7;Q53FB6;P05091-2;Q9UN17 ALDH2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 59.984 60.041 3 0.085094 17943 20230619_1885_Aki_TMTPro18x_K_F5 36.993 23.314 74417 72472 75958 67192 83237 93282 89989 75736 123670 43155 46601 35042 39606 26559 55687 46751 39886 45762 68905 66285 77099 68698 86125 91984 91283 77743 120730 45296 51084 35747 41385 28787 55427 46620 38356 43454 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201690000 6743 1475 6390 12793;12794 10323 10323 1 9606 Homo sapiens 0.0073630772430988145 ELGGFTEK Unmodified 879.4338 0.43379771 2187 B1AH87;Q13850;P30536;O76068 TSPO;PBR Translocator protein yes no 0 0 0 4.5 0.5 1 1 48.671 48.728 2 0.0018656 13362 20230619_1883_Aki_TMTPro18x_K_F4 135.83 70.154 673380 569220 629620 660310 1034000 968620 1036800 1000600 1189800 832600 1061800 1148500 1116700 960800 963680 1159500 1253800 1102200 622450 521870 649540 663600 1040800 957190 1049200 1015300 1197000 860620 1098300 1145700 1131200 1007300 999640 1158300 1195700 1048000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 589040000 6744 2187 6391 12795;12796 10324;10325 10324 2 9606 Homo sapiens -0.010741832648591298 ELGGLEGDPSPEEDEGIQK Unmodified 1997.9066 0.90655971 742 Q9BT09;A0A024RD07;A0A024RCZ2 CNPY3;TNRC5 Protein canopy homolog 3 yes no 0 0 0 1.5 0.5 1 1 53.609 53.623 3 1.1955E-24 15818 20230619_1880_Aki_TMTPro18x_K_F1 200.69 183.2 95121 73519 92723 101030 93803 98698 89991 90678 107990 118280 127430 131330 122100 109460 118440 135040 130510 149880 87907 67544 94436 99710 97241 99805 91571 93961 109830 118440 129630 131990 124650 114980 121270 136070 124890 142130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 243550000 6745 742 6392 12797;12798 10326;10327 10326 2 9606 Homo sapiens -0.05247730756605051 ELGHGALAEK Unmodified 1023.5349 0.53490874 4270 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 3.5 0.5 1 1 39.163 39.211 3 0.00011073 9209 20230619_1883_Aki_TMTPro18x_K_F4 128.01 92.474 128360 97700 118110 141450 178320 179820 170480 167590 218960 165050 178160 184500 195570 155930 154060 200310 207170 182360 118560 89819 121880 139670 180210 178630 173740 171970 218570 167650 185470 185510 197080 164140 160560 199450 197530 173490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231810000 6746 4270 6393 12799;12800 10328 10328 1 9606 Homo sapiens 0.02408268437852712 ELGHGQPEAR Unmodified 1092.5312 0.53122035 3126 J3KPH8;Q8WUI4-10;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8 HDAC7 Histone deacetylase;Histone deacetylase 7 yes no 0 0 0 2 0 1 27.203 27.28 3 0.00051291 4806 20230619_1881_Aki_TMTPro18x_K_F2 101.39 81.064 7952.9 4413.1 7170.5 10160 12275 12717 12648 10540 11738 8989.3 12425 13427 11793 10468 11717 8793.4 15276 11849 7333.1 4091.3 7446.3 9803.3 12346 12605 12691 10885 12024 9308.2 12698 13323 12058 10806 12094 9046.3 14558 11234 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2532000 6747 3126 6394 12801 10329;10330 10330 2 9606 Homo sapiens -0.011344013360030658 ELGIQVHSVTR Unmodified 1237.6779 0.67788459 2338 B7Z6D5;B3GQE6;Q96GQ7;A0A087X059 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 0 0 7 0 1 40.44 40.508 3 4.0977E-13 9457 20230619_1887_Aki_TMTPro18x_K_F7 199.21 143.54 71933 59274 57515 67212 81877 80558 81716 85846 77631 77887 85864 78234 84584 75360 78510 94565 100490 86758 66407 54337 60046 67416 83045 80602 82276 87089 79662 79135 87611 79389 86125 78820 81237 94240 95836 82536 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168200000 6748 2338 6395 12802 10331 10331 1 9606 Homo sapiens 0.06855275829070706 ELGISPIMTGK Unmodified 1144.6162 0.61619553 4160 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5;J3KSK6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes no 0 0 0 8 0 1 57.028 57.08 3 0.051998 16591 20230619_1888_Aki_TMTPro18x_K_F8 45.257 2.4686 38920 33135 41985 42446 37774 52474 48926 41632 59272 31333 30929 32095 34961 31454 36756 36484 34197 33808 36021 30408 42354 42223 39956 52017 48968 43033 58573 32316 33266 32542 35663 32721 37201 36439 32741 32141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25840000 6749 4160 6396 12803 10332 10332 1 9606 Homo sapiens 0.049672080856225875 ELGITALHIK Unmodified 1093.6495 0.64954457 1363 A0A2R8Y811;P62263;E5RH77;A4D1M5 RPS14;LOC401404 40S ribosomal protein S14 yes no 0 0 0 8 0 1 52.88 52.955 3 1.0733E-05 14798 20230619_1888_Aki_TMTPro18x_K_F8 151.15 151.15 338250 254270 307730 318560 269740 331170 332310 305980 366320 345500 265960 288700 369850 287970 313240 383560 354740 331950 312380 233400 314670 316610 285210 333270 332440 315480 367510 345440 282340 295630 371410 302240 322170 380810 338860 315920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2093299999.9999998 6750 1363 6397 12804 10333 10333 1 9606 Homo sapiens 0.1064657791978334 ELGIWEPLAVK Unmodified 1253.702 0.70197407 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 7 0.816 1 1 1 63.069 63.104 3 0.00020469 19124 20230619_1888_Aki_TMTPro18x_K_F8 110.84 84.165 1151000 1034500 1075100 1139800 973470 1075900 1187800 1195000 1235400 1471100 1389300 1374900 1394600 1241500 1383000 1603400 1242200 1442900 1064300 947830 1097300 1142200 1025000 1096000 1187100 1220000 1263200 1468400 1418600 1395800 1422700 1303800 1400200 1595900 1191300 1371500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2504100000 6751 2435 6398 12805;12806;12807 10334;10335;10336 10336 3 9606 Homo sapiens 0.08527116262735035 ELGLDEGVDSLK Unmodified 1273.6402 0.64016167 50 Q8WXX5;A0A024QZN2;Q2VIL4 DNAJC9;hCG_2024613 DnaJ homolog subfamily C member 9 yes no 0 0 0 2 0.816 1 1 1 56.895 56.911 3 5.4221E-11 17371 20230619_1881_Aki_TMTPro18x_K_F2 193.22 160.49 224530 181590 211100 223250 207000 248730 239670 244460 262220 267140 263200 237850 278830 219520 224030 300230 275130 277330 207500 166600 215600 222390 216400 249440 240520 250600 265980 267860 270460 242350 281400 231400 232020 298880 262760 263640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 207200000 6752 50 6399 12808;12809;12810 10337;10338 10337 2 9606 Homo sapiens 0.014287200529452093 ELGLNPEK Unmodified 898.476 0.47599688 2058 A8K4W5;Q59GW6;Q9BWD1;Q9BWD1-2 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes no 0 0 0 4 0.816 1 1 1 46.981 47.047 2 0.0025363 12595 20230619_1883_Aki_TMTPro18x_K_F4 125.16 68.614 730890 565650 622340 672880 607470 599640 627150 626300 720660 757680 884180 801990 879090 710690 664320 979600 973060 821460 674780 518900 641120 669920 632520 612910 634460 641730 735460 759940 898360 809830 887140 750190 698040 970300 926980 782460 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 595700000 6753 2058 6400 12811;12812;12813 10339;10340;10341 10340 3 9606 Homo sapiens 0.02269792143522409 ELGLPEELVSR Unmodified 1240.6663 0.66631685 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 3.5 0.5 1 1 57.514 57.532 2 1.6173E-16 17401 20230619_1882_Aki_TMTPro18x_K_F3 220.87 163.77 590430 540590 564240 618770 585370 615240 553200 651150 679370 716330 723650 684580 736480 673660 630730 724390 769760 739450 546160 495420 575870 618610 605520 623470 564050 664210 687120 719400 740550 696140 746630 697820 651400 727780 734950 702290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1128600000 6754 1182 6401 12814;12815 10342;10343 10342 2 9606 Homo sapiens 0.05561034015090627 ELGLREENEGVYNGSWGGR Unmodified 2120.9875 0.98754442 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GW82;A0A1B0GUA1;A0A1B0GTJ4;A0A1B0GV49;A0A0J9YWF7;A0A1B0GUY0;H0YHM6;F8WDY6;F8VVF2;A0A1B0GW65;F8WD33;A0A0J9YWM6 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 1 4 0 1 48.403 48.443 3 1.1313E-24 13265 20230619_1883_Aki_TMTPro18x_K_F4 206.11 181.17 65342 55494 75306 65201 65348 82708 75613 78647 87232 88371 95892 94951 93447 84919 98694 94485 99399 108410 60511 50883 75472 65316 69006 82191 76048 80858 88554 88989 97886 95757 95730 88431 100290 95591 95160 102790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112460000 6755 1415 6402 12816 10344 10344 1 9606 Homo sapiens -0.028109852032685012 ELGMEERPYSSR Oxidation (M) 1468.6616 0.66164217 4618 Q9NX46;B4DHV5;B7ZAN4 ADPRHL2 Poly(ADP-ribose) glycohydrolase ARH3 yes no 0 1 1 2.5 0.5 1 1 34.251 34.309 3 0.001725 7374 20230619_1881_Aki_TMTPro18x_K_F2 88.338 76.28 23732 18772 22242 22238 24687 23406 27041 26399 30831 26275 30793 30137 29976 29237 30894 32935 28962 32540 21928 17218 22752 22200 25487 23661 27244 26761 31173 26687 31561 30406 30685 30364 31306 33013 27754 30898 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57436000 6756 4618 6403 12817;12818 10345 10345 2830 1 9606 Homo sapiens -0.05394218189985622 ELGNDAYK Unmodified 908.42396 0.42396131 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 3.5 0.5 1 1 42.593 42.648 3 0.0029347 10755 20230619_1882_Aki_TMTPro18x_K_F3 98.933 64.856 239560 165100 251850 263460 316220 282140 265300 279650 263480 327340 354600 288460 299910 242600 310180 169830 326220 233360 221390 152030 255740 258120 321380 283890 270590 287060 272460 326900 356730 292850 308140 248130 315280 175920 311330 221310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231790000 6757 2088 6404 12819;12820 10346 10346 1 9606 Homo sapiens -0.033913712702315024 ELGPDGEEAEGPGAGDGPPR Unmodified 1905.8341 0.83406347 1299 A0A1U9X839;A0A1U9X830;P18615;P18615-3;A0A0A0MSN9;B7Z6T4;E9PD43;A0A0A0MT02;A0A0G2JI50 NELFE;RDBP Negative elongation factor E yes no 0 0 0 1 0 1 42.959 42.959 3 1.3492E-29 11410 20230619_1880_Aki_TMTPro18x_K_F1 196.71 164.09 40054 35688 37820 49258 45550 62556 56885 49604 71771 52477 62312 48888 59627 54719 51171 62381 86575 65063 37041 32772 38820 48761 47126 61903 57108 51664 71805 52847 64155 50069 60617 56652 54187 62681 82344 61848 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63625000 6758 1299 6405 12821 10347 10347 1 9606 Homo sapiens -0.08262020039592244 ELGSECGIEFDEEK Unmodified 1640.6876 0.68758215 619 A0A0C4DGS1;A0A024RAD5;P39656;U3KQ84;P39656-2 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 0 1.5 0.5 1 1 54.022 54.036 3 9.6172E-13 16183 20230619_1881_Aki_TMTPro18x_K_F2 192.65 162.51 86518 60956 79602 95735 77771 110960 105840 99265 120680 110180 114520 137110 139540 118410 123950 116370 117750 145920 79879 56113 81558 93946 81900 110660 105510 102540 121840 111620 119050 137220 140850 122680 125930 118660 112920 138180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 508340000 6759 619 6406 12822;12823 10348 10348 1 9606 Homo sapiens -0.10713413529038007 ELGSLPLPLSTSEQR Unmodified 1625.8625 0.86245047 2189 B1AJQ6;Q6LEU0;Q86Y82;B4DSZ1 STX12 Syntaxin-12 yes no 0 0 0 6 0 1 59.929 59.991 2 0.049321 18114 20230619_1886_Aki_TMTPro18x_K_F6 74.611 51.182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6760 2189 6407 12824 10349 10349 1 9606 Homo sapiens 0.07455374398318781 ELGSLPQEAFEK Unmodified 1346.6718 0.67179615 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 5 0 1 57.293 57.352 3 0.002151 16844 20230619_1885_Aki_TMTPro18x_K_F5 75.89 62.672 112960 90730 108880 106280 85379 114170 119320 110780 110990 129480 119140 122900 138820 115920 117470 135130 120240 128860 104410 83206 110610 106200 91572 114740 118110 113930 113980 129620 122750 124800 140010 120830 120080 135090 115080 122420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150850000 6761 4191 6408 12825 10350 10350 1 9606 Homo sapiens 0.012327128068818638 ELGSSVALYSR Unmodified 1180.6088 0.60880197 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3;Q5CAQ4;I3L0K7;I3L239 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 6.5 0.5 1 1 48.205 48.288 2 9.487E-12 12761 20230619_1887_Aki_TMTPro18x_K_F7 195.34 150.92 487980 405010 442170 479090 420530 500840 472120 491010 532630 492680 527750 528100 542620 440430 529670 564550 592100 552270 450910 371410 452900 478100 440360 504540 475080 502360 538900 498920 542420 531690 552640 463830 542440 564560 565640 524820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 567620000 6762 1211 6409 12826;12827 10351;10352 10352 2 9606 Homo sapiens 0.02572191809508695 ELGTVMR Unmodified 804.41637 0.41637351 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;Q9BRL5;A8K1M2;M0QZ52;G3V479;F8WBR5;P27482;B4DUI9;C9J7T9;P02585 CALM3;CALM2;CALM1;CALML3;TNNC2 Calmodulin-like protein 3;Troponin C, skeletal muscle yes no 0 0 0 5.5 1.12 1 1 1 1 41.831 41.898 2 4.9499E-05 10287 20230619_1886_Aki_TMTPro18x_K_F6 148.54 85.252 1613400 1294300 1473200 1444300 1512300 1524200 1615500 1558400 1783400 1793600 1814300 1760500 2044600 1572300 1703100 2247500 2092400 1915800 1490600 1186400 1508400 1448200 1569700 1536900 1628400 1596100 1809300 1799000 1869600 1783600 2062500 1664100 1762300 2227500 1997000 1823800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5187500000 6763 2325 6410 12828;12829;12830;12831 10353;10354;10355;10356 10355 4 9606 Homo sapiens 0.006341979285025445 ELGVATN Unmodified 702.35482 0.35481911 1651 A0A7I2V2U6;B2R7W0;P13995;P13995-2;B8ZZU9;A0A7I2V482;B4DY35;B9A062;A0A7I2V3T1 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes no 0 0 0 2 0 1 44.063 44.146 2 0.035126 11748 20230619_1881_Aki_TMTPro18x_K_F2 82.913 71.545 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6764 1651 6411 12832 10357 10357 1 9606 Homo sapiens -0.008264104991553722 ELGVGIALR Unmodified 926.55492 0.5549159 2888 E7DVW5;Q01469 FABP5 Fatty acid-binding protein, epidermal yes no 0 0 0 4.5 3.04 1 1 1 1 52.528 52.573 2 0.00082156 14624 20230619_1888_Aki_TMTPro18x_K_F8 122.18 43.56 1104500 868600 1008800 1064200 909090 1077800 1118300 1168100 1214200 1206600 1089400 1045000 1176900 1012900 1042400 1261900 1257000 1293200 1020300 796980 1031700 1059100 958580 1090800 1118700 1187900 1227000 1212300 1127200 1067400 1192400 1059400 1075400 1265100 1200900 1227800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4714400000 6765 2888 6412 12833;12834;12835;12836 10358;10359;10360 10360 3 9606 Homo sapiens 0.08870064168468161 ELGVSTNANYK Unmodified 1194.5881 0.58806652 4282 Q8WVY7 UBLCP1 Ubiquitin-like domain-containing CTD phosphatase 1 yes yes 0 0 0 6 0 1 45.754 45.84 3 0.00022964 12006 20230619_1886_Aki_TMTPro18x_K_F6 108.7 93.309 92857 61400 75053 68337 77095 94497 87757 94086 102590 102100 101320 97664 94561 106710 101180 113360 253170 108640 85623 56328 77726 68836 80342 93545 88344 96293 103640 102650 103720 99688 97447 110010 111150 113530 239770 103770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111740000 6766 4282 6413 12837 10361 10361 1 9606 Homo sapiens -0.001443985701598649 ELHGQNPVVTPCNK Unmodified 1591.7777 0.77767498 3000 F8WJN3;Q16630-3;Q16630;Q16630-2;A0A2P1M905;A0A2P1M8Z1 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes no 0 0 0 6.5 0.5 1 1 39.719 39.796 3 0.00026427 9173 20230619_1887_Aki_TMTPro18x_K_F7 93.478 89.575 13496 14703 23180 19084 20234 23112 24689 19404 19434 15509 19086 10825 17980 8863.6 22655 11310 11531 9449.2 12579 13484 22678 18971 21330 22976 24472 19989 20062 15748 19512 11164 18547 9369.5 22277 11260 11126 9002.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42753000 6767 3000 6414 12838;12839 10362 10362 1 9606 Homo sapiens 0.005457253807435336 ELHINLIPNK Unmodified 1189.6819 0.68190733 3177 K9JA46;P07900;P07900-2;Q2VPJ6;G3V2J8;B4DTA5;Q86SX1;Q14568 EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 yes no 0 0 0 4.5 2.29 1 1 1 1 1 1 1 1 52.771 52.822 3 0.002197 14734 20230619_1888_Aki_TMTPro18x_K_F8 83.869 63.662 700360 400730 554210 634370 549720 729870 606800 639430 901430 649250 606870 585220 764070 585420 543130 815650 752650 711120 645270 369300 575660 622240 574840 728050 617500 659650 889380 654430 642910 597560 764270 616270 569230 809240 717820 676680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18798000000 6768 3177 6415 12840;12841;12842;12843;12844;12845;12846;12847 10363;10364 10364 2 9606 Homo sapiens 0.09465365322807884 ELHINLIPNKQDR Unmodified 1588.8685 0.8685389 3177 K9JA46;P07900;P07900-2;Q2VPJ6;G3V2J8;B4DTA5;Q86SX1 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 1 1 0 1 47.663 47.663 3 6.8653E-06 13415 20230619_1880_Aki_TMTPro18x_K_F1 125.83 99.82 170560 192020 249220 224560 268480 226660 282840 227140 138500 221700 227110 85558 107880 56455 328060 49096 45602 32501 158690 175900 246710 224260 276540 229300 279960 231980 153060 219920 223160 92244 123700 59088 312600 49458 46271 31093 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239240000 6769 3177 6416 12848 10365 10365 1 9606 Homo sapiens 0.09765937420502269 ELHIQGNR Unmodified 965.50428 0.50427732 2182 B0YJ73;Q15404;Q32Q10;Q15404-2 RSU1 Ras suppressor protein 1 yes no 0 0 0 4 0.816 1 1 1 31.745 31.818 3 4.0757E-05 6325 20230619_1885_Aki_TMTPro18x_K_F5 159.04 118.69 61933 39788 54754 60561 78046 79070 71938 77899 97032 77019 85972 82409 92891 71484 76778 76676 92571 86533 57136 36628 56598 59668 79064 78509 73648 79598 96941 78088 88983 83054 93782 74424 79220 77529 88377 82107 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 146310000 6770 2182 6417 12849;12850;12851 10366;10367 10367 2 9606 Homo sapiens 0.020145348434766674 ELHPLHR Unmodified 900.49298 0.49298435 2609 B4DWW6;B4DW61;Q8IZ73-2;Q8IZ73 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 yes no 0 0 0 5.5 0.5 1 1 28.064 28.117 3 0.012556 5019 20230619_1885_Aki_TMTPro18x_K_F5 83.614 10.575 26305 13190 21172 23611 30346 29125 27466 28208 34716 28050 30812 30485 28058 26605 25846 29359 37440 33320 24225 12185 22081 23042 30707 29004 28077 28870 34783 28445 31670 30708 28653 27711 26978 29672 35682 31620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11450000 6771 2609 6418 12852;12853 10368;10369 10368 2 9606 Homo sapiens 0.03875757540004088 ELHVGENQIEMLEAEHLK Unmodified 2118.0416 0.041553824 1188 A0A140VJN3;Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes no 0 0 0 2 0 1 54.139 54.167 4 2.4901E-38 16259 20230619_1881_Aki_TMTPro18x_K_F2 249 228.61 27705 17138 28942 27672 29234 28451 26733 29560 31294 30270 29700 31917 38074 29755 31704 34991 31953 36716 25589 15792 29285 27085 30247 28733 27262 30135 31580 30604 30928 32254 38270 31057 32383 35166 30603 34837 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25290000 6772 1188 6419 12854 10370 10370 1 9606 Homo sapiens 0.027254709041244496 ELIDHSPK Unmodified 937.4869 0.48689592 2272 E7EWP0;D3DNS1;B2R9L0;H0Y886;O43674-2;O43674;Q05D62 NDUFB5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes no 0 0 0 4 0.816 1 1 1 39.24 39.303 3 0.00092635 9250 20230619_1883_Aki_TMTPro18x_K_F4 119.86 70.767 165010 131050 149760 180250 258080 237860 244630 239400 330470 174650 224630 225210 216980 182680 213760 205480 242570 210540 152440 120380 155210 178670 258920 236230 249840 242710 327020 181800 235120 225000 221610 191010 218950 206470 231590 200030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 367010000 6773 2272 6420 12855;12856;12857 10371 10371 1 9606 Homo sapiens 0.015651945178206006 ELIECAR Unmodified 889.43275 0.43275186 1292;4740 A0A1S5UZ07;Q9Y490;Q9Y4G6;A0A1B0GVU7;G1UI21;H0YMT1 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 0 3 0 1 40.505 40.561 2 0.074437 9830 20230619_1882_Aki_TMTPro18x_K_F3 75.189 12.472 101910 79640 104840 102200 114320 131800 114780 127580 153560 130870 137260 131790 136750 128300 96248 150040 172780 173180 94225 73110 106390 101760 118110 130900 116930 130640 153540 132170 141460 133690 137840 133610 103100 151550 164580 164240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85052000 6774 1292;4740 6421 12858 10372 10372 1 9606 Homo sapiens -0.01638720905395985 ELIEIISGAAAL Unmodified 1198.6809 0.68090428 2521 P36542-2;B4DL14 ATP5C1 ATP synthase subunit gamma, mitochondrial;ATP synthase subunit gamma yes no 0 0 0 6 0.816 1 1 1 68.565 68.601 2 2.5041E-05 21763 20230619_1886_Aki_TMTPro18x_K_F6 138.54 103.44 8982.6 8470 9014.6 8809.6 15046 14364 16982 11908 15248 11940 15181 14774 16081 11550 14531 14926 11813 15794 8314.1 7754.9 9247.9 8944.7 15175 14056 16934 12346 15616 12159 15618 14769 16290 12208 14657 14993 11356 14977 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 58954000 6775 2521 6422 12859;12860;12861 10373;10374;10375 10374 3 9606 Homo sapiens 0.08951106163249278 ELIEIISGAAALD Unmodified 1313.7078 0.70784731 3555 Q8TAS0;P36542 ATP5C1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial yes no 0 0 0 5 2 1 1 1 1 1 1 1 68.253 68.281 2 1.5679E-05 21489 20230619_1885_Aki_TMTPro18x_K_F5 128.36 96.23 8066.9 6752.2 5688.2 7538.5 9126.3 6105.8 8935.8 8135.2 7613.2 8152.7 10200 6658.9 7278.4 9799.8 9218.3 6852.5 8447.6 9690.6 7442.1 6188.6 6035.1 7436.8 9171.6 6343 8977.1 8174.1 7932.2 8193.8 10196 6945.1 7634.8 9840.3 9284.7 7101.8 8098.7 9169.6 3 3 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 46796000 6776 3555 6423 12862;12863;12864;12865;12866;12867;12868 10376;10377 10377 2 9606 Homo sapiens 0.06354169983774227 ELIEYFK Unmodified 940.49058 0.49058431 3882 Q14232;Q14232-2;H0YGG4 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes no 0 0 0 7 0 1 61.384 61.423 3 0.02164 18404 20230619_1887_Aki_TMTPro18x_K_F7 80.18 43.159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6777 3882 6424 12869 10378 10378 1 9606 Homo sapiens 0.017958642916710232 ELIFEETAR Unmodified 1106.5608 0.56078914 2491 B4DHN0;Q1HBJ4;P28482;Q499G7;P28482-2 MAPK1 Mitogen-activated protein kinase;Mitogen-activated protein kinase 1 yes no 0 0 0 2.5 0.5 1 1 52.218 52.271 2 0.00012571 15410 20230619_1881_Aki_TMTPro18x_K_F2 151.44 95.911 118690 106310 103980 108260 97676 117220 118330 115790 157120 135790 136040 128450 138460 125250 131250 145610 152310 147530 109710 97338 106790 109360 102680 117860 119290 118920 156960 136010 140620 130670 140980 130370 134820 146070 145490 140120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169150000 6778 2491 6425 12870;12871 10379 10379 1 9606 Homo sapiens 0.011771178894605328 ELIIGDR Unmodified 814.45487 0.45486751 3504 V9HW26;P25705;P25705-2;P25705-3;K7EK77;B4DGW3;K7ENJ4 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 3 0.816 1 1 1 45.816 45.883 2 0.0068644 12232 20230619_1882_Aki_TMTPro18x_K_F3 129.68 52.836 1154500 1034800 1029000 1160300 1260500 1423300 1445600 1447800 1789000 1533500 1591100 1604400 1675900 1370600 1481200 1721300 1733800 1698400 1067200 948230 1060300 1165200 1296900 1419900 1456800 1479300 1794500 1547800 1645400 1617900 1698400 1440300 1524900 1722100 1656200 1613500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1298200000 6779 3504 6426 12872;12873;12874 10380;10381;10382 10381 3 9606 Homo sapiens 0.040218268346734476 ELILFSNSDNER Unmodified 1435.6943 0.69432251 3433;1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;Q59H80;P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 0 0 2 0 1 56.596 56.614 2 0.00012284 17245 20230619_1881_Aki_TMTPro18x_K_F2 119.74 98.237 105010 92807 97097 107740 84079 115640 91697 101840 127670 127190 121050 113980 137350 114160 101330 132330 123190 105800 97086 85074 99174 107690 88840 115980 93186 105650 127820 126820 125120 116340 137950 118690 105040 131140 117530 100830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29720000 6780 1843;3433 6427 12875 10383;10384 10383 2 9606 Homo sapiens -0.0060968779544055 ELILHNPVTLK Unmodified 1275.7551 0.75507227 4627 Q9NY93-2;Q9NY93;G3V0G3;H7C3E9 DDX56 Probable ATP-dependent RNA helicase DDX56 yes no 0 0 0 1 0 1 53.285 53.285 3 0.01463 15698 20230619_1880_Aki_TMTPro18x_K_F1 65.395 45.066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6781 4627 6428 12876 10385 10385 1 9606 Homo sapiens 0.12822494045417443 ELIPNIPFQMLLR Unmodified 1582.8905 0.8905199 332 A0A024R5C5;P11498 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 4.5 0.5 1 1 65.666 65.693 2 1.2882E-05 20453 20230619_1885_Aki_TMTPro18x_K_F5 131.52 56.137 19235 19535 20076 21891 14579 23146 21976 20247 20771 27342 27649 30002 25422 19919 23688 23792 27918 30744 17820 17893 20264 21933 15821 23233 21701 21084 21522 27314 27964 29967 25922 21103 24353 24234 26690 29117 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41202000 6782 332 6429 12877;12878 10386 10386 1 9606 Homo sapiens 0.12239025844701246 ELIQTSALNFLTPLR Unmodified 1714.9618 0.96177059 828 A0A140VJU5;A0A994J549;A0A087WW40;Q9Y371;Q9Y371-2;Q9Y371-3 SH3GLB1 Endophilin-B1 yes no 0 0 0 4 0 1 64.47 64.478 3 2.4475E-14 20203 20230619_1883_Aki_TMTPro18x_K_F4 186.08 129.53 21345 17761 19181 20548 16951 23460 24297 20573 24907 25233 24189 21133 23155 20167 22120 26122 20732 25322 19722 16284 19650 20562 18019 23427 24082 21350 25311 25132 24788 21619 23616 21152 22460 26098 19881 24043 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49767000 6783 828 6430 12879 10387 10387 1 9606 Homo sapiens 0.1328881708307108 ELIRDEGVTSLYK Unmodified 1521.8039 0.80387296 2617 C9JPE1;B4DWZ5;O43772 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes no 0 0 1 6 0 1 51.483 51.56 3 0.00047079 14586 20230619_1886_Aki_TMTPro18x_K_F6 94.023 47.417 105480 87272 97139 107710 116150 128080 120370 136420 155350 111520 91665 88880 114900 79734 100760 107790 95397 87062 97480 80066 99728 107380 119330 128140 122180 138030 153690 113420 98044 90980 115760 84109 102450 106700 91269 82942 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61132000 6784 2617 6431 12880 10388 10388 1 9606 Homo sapiens 0.0638431782385851 ELISDNQYR Unmodified 1136.5462 0.54620171 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 3 0 1 42.797 42.862 2 9.9769E-08 10840 20230619_1882_Aki_TMTPro18x_K_F3 194.22 163.15 684340 471360 676670 682850 754180 974730 761660 808830 1030300 879240 1022200 1094900 930840 880040 881000 849960 1200700 1080600 632100 433520 689410 675730 779060 959000 775970 839360 1033400 891780 1045500 1093900 951500 913080 914110 867740 1144900 1024300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 796310000 6785 1104 6432 12881 10389 10389 1 9606 Homo sapiens -0.01660954258682068 ELISFLSEPEILVK Unmodified 1615.9073 0.9072754 1965 A6NDU8 C5orf51 UPF0600 protein C5orf51 yes yes 0 0 0 7 0 1 65.549 65.574 3 2.2816E-05 20348 20230619_1887_Aki_TMTPro18x_K_F7 111.79 96.254 57723 59641 58149 63009 63019 67691 68729 73544 78853 69510 71429 76667 77492 68750 73427 94279 72568 83039 53466 54598 59139 63453 65215 68256 69290 74605 79450 70688 73945 77280 78725 72490 74813 93640 69513 78951 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143460000 6786 1965 6433 12882 10390;10391 10391 2 9606 Homo sapiens 0.12395805211667721 ELISNASDALDK Unmodified 1274.6354 0.63541065 751;3452 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;A0A7P0TBC2;Q96GW1;A0A7P0T885;A0A7P0T8R3;A0A7P0Z405;B4DQX3;F8W026 HSP90AB1;HSP90B1;HEL-S-125m;TRA1 Heat shock protein HSP 90-beta;Endoplasmin no no 0 0 0 5 2 1 1 1 1 1 1 1 54.274 54.327 2;3 4.6565E-10 15887 20230619_1883_Aki_TMTPro18x_K_F4 149.83 119.89 968510 743000 818970 896720 863200 991570 942210 920220 1111200 1127600 1119300 1120300 1258300 1029600 1003700 1299000 835560 1159400 894060 681710 845540 894220 896130 993860 950690 950610 1123200 1128400 1153800 1134800 1267100 1079300 1017600 1292400 803330 1101500 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 39749000000 6787 751;3452 6434 12883;12884;12885;12886;12887;12888;12889 10392;10393;10394;10395;10396 10394 5 9606 Homo sapiens 0.009078359101749811 ELISNASDALEK Unmodified 1288.6511 0.65106071 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;Q9BV61;Q53G55;Q53FS6;Q8N9Z3 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 4.25 0.829 1 1 2 54.513 54.554 2;3 2.9929E-12 15631 20230619_1885_Aki_TMTPro18x_K_F5 201 145.43 454080 392540 448320 494690 409390 509740 482580 486490 531960 539440 576410 580360 575820 499650 569000 603310 613600 646140 419980 360150 455660 491350 430750 513630 484040 500110 540930 543540 589390 584640 587460 523560 581380 606910 586880 613130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1163700000 6788 1211 6435 12890;12891;12892;12893 10397;10398;10399 10399 3 9606 Homo sapiens 0.01828122427218659 ELISNSSDALDK Unmodified 1290.6303 0.63032527 3177 K9JA46;P07900;P07900-2;Q2VPJ6;G3V2J8;B4DTA5;Q86SX1;Q14568 EL52;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 yes no 0 0 0 3 0.816 1 1 1 50.756 50.807 3 2.5632E-06 14440 20230619_1882_Aki_TMTPro18x_K_F3 143.55 111.49 637910 497370 540590 611680 688310 786280 653880 678960 796680 749980 751030 733200 848990 638420 693250 875520 812200 743990 588940 456390 559920 610490 703020 779300 665700 702720 801960 753820 776720 742220 855520 674410 715230 868130 775490 708290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21020000000 6789 3177 6436 12894;12895;12896 10400 10400 1 9606 Homo sapiens -0.0033646795245658723 ELITLAK Unmodified 786.48511 0.485105 2076 A8K5J1;P11172;B5LY71;P11172-3;B5LY64;P11172-2;B5LY70;P11172-4;E9PFD2;B5LY67 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase;Orotidine 5'-phosphate decarboxylase yes no 0 0 0 7.5 0.5 1 1 54.284 54.351 2 0.0069009 15423 20230619_1888_Aki_TMTPro18x_K_F8 129.4 45.783 241200 192800 225050 235610 251260 285780 246490 249450 308330 309790 309910 298630 324000 286670 286670 350490 336090 332340 222880 176890 230410 235070 258990 284340 250760 258910 310790 309590 318400 303360 328580 299420 295240 350000 321070 315860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 517070000 6790 2076 6437 12897;12898 10401 10401 1 9606 Homo sapiens 0.0833218549985304 ELLAALQK Unmodified 884.53312 0.53311783 3142 J3QK89;Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes no 0 0 0 1.33 0.471 2 1 59.02 59.025 2;3 0.0084127 18251 20230619_1881_Aki_TMTPro18x_K_F2 104.75 43.959 103740 94621 105600 126600 106420 137730 124540 121820 146170 99321 107690 95276 113870 88639 121680 104720 104190 103450 96009 86853 107290 125310 111130 137990 125160 124980 145990 101570 112530 96765 116330 92549 122530 104970 99848 98274 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 499380000 6791 3142 6438 12899;12900;12901 10402;10403 10403 2 9606 Homo sapiens 0.08623259419903206 ELLACSHPFSK Unmodified 1287.6282 0.6281572 1066 E9PRV7;A0A0S2Z3I6;A0A0S2Z392;P25098 ADRBK1 Beta-adrenergic receptor kinase 1 yes no 0 0 0 1 0 1 48.669 48.669 3 0.0010761 13850 20230619_1880_Aki_TMTPro18x_K_F1 77.593 53.302 34188 33447 35148 33149 28084 28872 32851 36996 35092 40966 40574 37471 41922 32514 35607 42832 43669 34953 31659 30608 35500 33487 29836 29735 32951 37327 35871 41055 41404 38046 42425 34253 36800 42418 41644 33314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18146000 6792 1066 6439 12902 10404 10404 1 9606 Homo sapiens -0.004151751712470286 ELLADQNLK Unmodified 1042.5659 0.56587452 3896 Q14684;Q14684-2;Q6PJM8 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 0 4.33 0.471 2 1 50.947 50.993 2;3 0.00077166 14195 20230619_1885_Aki_TMTPro18x_K_F5 103.7 46.102 198280 173350 183480 202360 190200 221420 190610 193710 251650 220670 222340 222340 253880 207280 214180 262040 248240 231090 183310 158920 187830 202230 197280 221840 194080 200540 251730 221750 230840 225210 256210 217200 220630 260590 237060 219880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 394910000 6793 3896 6440 12903;12904;12905 10405;10406 10406 2 9606 Homo sapiens 0.04629421752088092 ELLAFQTSEK Unmodified 1164.6027 0.60265396 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;A0A994J766;O00507;O00507-2;A0A994J588;A0A994J4T8 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 0 0 0 6 0 1 55.532 55.608 3 0.047215 16281 20230619_1886_Aki_TMTPro18x_K_F6 47.053 23.448 37677 33578 36206 40302 35582 39240 37119 40546 41474 47450 44062 39001 45833 36978 45469 47587 42185 43848 34847 30789 36914 40139 37056 39797 37497 41506 42151 47313 45136 39926 46682 38786 46075 47436 40406 41681 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24254000 6794 1867 6441 12906 10407 10407 1 9606 Homo sapiens 0.02693673577982736 ELLAVPDNYK Unmodified 1160.6077 0.60773933 183 A0A024R222;B4DHQ3;Q9Y617;A0A024R280;Q9Y617-2 PSAT1 Phosphoserine aminotransferase yes no 0 0 0 6 0.816 1 1 1 55.959 56.025 2 2.7743E-06 16447 20230619_1886_Aki_TMTPro18x_K_F6 169.41 101.18 212570 186500 219170 175590 152820 191470 150040 155500 180170 267890 280670 342660 289370 247690 318330 324930 296100 406340 196700 170660 220790 178660 164140 191710 152690 164390 186220 266800 284140 341000 296370 262790 322040 329780 284280 384680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105830000 6795 183 6442 12907;12908;12909 10408;10409 10409 2 9606 Homo sapiens 0.033859774405982535 ELLDLHK Unmodified 866.48617 0.48616764 3001 G1UI16;Q29RF7;Q29RF7-3;H0Y9L9 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 0 5.5 0.5 1 1 48.683 48.761 3 0.0067099 13226 20230619_1885_Aki_TMTPro18x_K_F5 100.15 23.25 68975 55762 69325 75954 82498 81951 74625 76209 96479 84074 87967 81850 98672 72934 72394 94669 97463 90252 63777 51216 70614 75103 84400 82297 76383 78462 96709 84513 91043 82937 99067 76727 75579 94470 92960 85795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173730000 6796 3001 6443 12910;12911 10410 10410 1 9606 Homo sapiens 0.04758399868774177 ELLEIVK Unmodified 842.51132 0.51131975 1192 A0A140VJP5;P31153;B4DEX8;P31153-2;B4E1K2;B4DN74;B4DFQ8 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase yes no 0 0 0 5 0.816 1 1 1 59.275 59.314 2 0.01296 17604 20230619_1885_Aki_TMTPro18x_K_F5 114.6 35.486 275840 214720 252550 260940 244670 329240 269830 273240 357620 331930 296790 295280 357000 291480 268120 414080 368430 377840 254800 197010 258480 260600 256120 326320 273320 284510 357040 331380 309890 301480 358290 307330 280550 411630 351610 359220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 669180000 6797 1192 6444 12912;12913;12914 10411;10412 10411 2 9606 Homo sapiens 0.08376454671338252 ELLFHHEWVVK Unmodified 1435.7612 0.76122028 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;Q92973-3;A0A7P0T944;A0A7P0T9C0 TNPO1 Transportin-1 yes no 0 0 0 8 0 1 52.219 52.296 4 0.034456 14538 20230619_1888_Aki_TMTPro18x_K_F8 58.676 30.934 40137 28246 38122 40122 27441 38726 35073 31702 67196 48603 44705 68187 60226 61539 36451 109570 94455 139560 37066 25970 38750 39509 29693 39079 35896 33361 65699 48878 47721 68150 60016 66235 41109 110730 90125 132070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140030000 6798 629 6445 12915 10413 10413 1 9606 Homo sapiens 0.060770122769099544 ELLFLSNANPSLLER Unmodified 1714.9254 0.92538508 3623 P51398-2;P51398-3;P51398;V9GYW1;V9GYA7;V9GZ61;V9GYF7 DAP3 28S ribosomal protein S29, mitochondrial yes no 0 0 0 8 0 1 63.345 63.368 3 5.6035E-28 19244 20230619_1888_Aki_TMTPro18x_K_F8 211.75 183.58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6799 3623 6446 12916 10414 10414 1 9606 Homo sapiens 0.09651940186358843 ELLGQGLLLR Unmodified 1110.6761 0.67609367 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 2 0 2 60.9 60.91 2 5.6936E-24 19002 20230619_1881_Aki_TMTPro18x_K_F2 226.64 151.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6800 12 6447 12917;12918 10415;10416 10416 2 9606 Homo sapiens 0.12518266811139256 ELLHSQNTWLNTELK Unmodified 1824.937 0.9370124 3440 P12270;P12270-2;Q58F23;Q504U6;Q9UE33 TPR Nucleoprotein TPR yes no 0 0 0 7.5 0.5 1 1 56.116 56.173 3 4.2246E-08 16240 20230619_1888_Aki_TMTPro18x_K_F8 139.21 114.8 89087 77720 87270 93755 92165 109120 100100 99159 117710 118040 105780 107230 114860 105490 102940 121790 115540 124100 82396 71274 88929 93565 95638 108930 101010 102480 118510 117980 109500 109280 116440 109730 105690 122200 110490 117820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87090000 6801 3440 6448 12919;12920 10417 10417 1 9606 Homo sapiens 0.057541372096920895 ELLIFNK Unmodified 875.51165 0.5116541 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 5 3 1 1 60.433 60.444 2;3 0.016025 17934 20230619_1888_Aki_TMTPro18x_K_F8 83.614 32.648 157450 136990 143560 156220 149450 183470 161900 152040 165650 169240 159930 153090 177330 152900 173080 187430 171790 176200 145550 125560 147170 156550 155260 182720 162640 157980 168410 169670 165120 156210 180240 159550 176080 187130 164410 167460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91314000 6802 261 6449 12921;12922 10418;10419 10419 2 9606 Homo sapiens 0.06891874391192232 ELLIHER Unmodified 908.50797 0.50796571 4328 Q96BN8 OTULIN Ubiquitin thioesterase otulin yes yes 0 0 0 3 0 2 38.077 38.13 3 0.00078911 8828 20230619_1882_Aki_TMTPro18x_K_F3 121.99 21.801 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6803 4328 6450 12923;12924 10420;10421 10421 2 9606 Homo sapiens 0.05005204617327763 ELLIIGGVAAR Unmodified 1110.6761 0.67609367 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3;A0A7I2V421 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 1.5 0.5 1 1 58.714 58.721 2 0.00085953 18127 20230619_1881_Aki_TMTPro18x_K_F2 107.56 59.657 70207 55847 62896 69360 61880 86278 68434 75515 98120 76620 81534 86268 84723 76088 90596 84998 91253 105210 64851 51247 64544 69145 64750 85660 69548 77896 97547 77726 84622 86787 86684 79307 92029 86418 87400 99661 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106280000 6804 1661 6451 12925;12926 10422 10422 1 9606 Homo sapiens 0.12518266811139256 ELLLPDTER Unmodified 1084.5764 0.57643921 2382 Q8TEX9-2;Q8TEX9;B3KQ33;Q59FI4;H0YN14;H0YLV0;H0YL92;H0YKG5;H0YK93 IPO4 Importin-4 yes no 0 0 0 2 0 1 51.221 51.266 2 0.00037491 15006 20230619_1881_Aki_TMTPro18x_K_F2 138.06 83.654 146560 107090 116720 135400 132780 146480 140800 137320 172830 177180 156780 146560 164860 140680 151860 179630 153860 167550 135200 98318 121400 134530 136980 147080 142460 141970 173720 176030 161900 150000 167390 147390 154920 179130 147290 159220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107340000 6805 2382 6452 12927 10423 10423 1 9606 Homo sapiens 0.03753404406529626 ELLLQPVTISR Unmodified 1267.75 0.7499869 2997 F8WCF6;P59998;F8WDD7;A0A0A6YYG9;P59998-3;P59998-2;Q9H7Z5;H7C0A3 ARPC4-TTLL3;ARPC4 Actin-related protein 2/3 complex subunit 4 yes no 0 0 0 3.67 3.09 1 1 1 58.268 58.289 2 5.3303E-07 17748 20230619_1880_Aki_TMTPro18x_K_F1 199.33 182.1 227780 211050 223910 249270 258610 292510 256180 242700 268050 283210 272770 260450 306670 236710 264180 323090 271240 278420 210770 193470 228460 249120 265850 291390 258820 252500 272810 283380 281040 264760 309710 249590 270110 320620 259500 264890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1710599999.9999998 6806 2997 6453 12928;12929;12930 10424;10425 10424 2 9606 Homo sapiens 0.1268219018279524 ELLNFYAWQHR Unmodified 1475.731 0.73098279 4719 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A yes yes 0 0 0 3 0 1 58.365 58.396 3 2.1701E-17 17792 20230619_1882_Aki_TMTPro18x_K_F3 195.51 166.55 24841 17720 27604 28037 20580 30049 31403 27519 33138 28123 24658 30848 36198 28191 29857 35633 33308 35271 22973 16313 27723 27480 22268 30141 31080 28322 33321 28487 26250 31094 36266 29571 30693 35651 31849 33497 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61153000 6807 4719 6454 12931 10426 10426 1 9606 Homo sapiens 0.012146536117370488 ELLNLAENNK Unmodified 1156.6088 0.60880197 2876 G5EA19;U3KQS5;E5RG17;Q6P1N9;H0YBX2;E5RGF2;A0A0D9SGD3;Q6P1N9-2;E5RG62;E5RK70 TATDN1 Putative deoxyribonuclease TATDN1 yes no 0 0 0 5 0.816 1 1 1 55.317 55.367 3 3.5657E-08 16152 20230619_1886_Aki_TMTPro18x_K_F6 192.5 150.96 119860 95752 118890 125430 117100 130070 121520 121470 142110 138600 141010 142360 155250 122670 134410 163300 153540 158390 110810 87912 120860 124280 121930 130980 122950 125170 143610 139290 145350 143730 156960 129380 138260 163080 146750 150470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 151430000 6808 2876 6455 12932;12933;12934 10427;10428 10428 2 9606 Homo sapiens 0.036761918094953216 ELLPEIR Unmodified 868.50182 0.5018177 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;P49321-2;Q5T626;Q5T624;Q9P1N1;H0YDS9;H0YF33;E9PRH9 NASP Nuclear autoantigenic sperm protein yes no 0 0 0 4 0.816 1 1 1 51.8 51.855 2 0.022146 14771 20230619_1883_Aki_TMTPro18x_K_F4 102.3 7.8889 581250 516230 501000 551560 553080 633500 526760 542910 716730 665880 684280 617810 659240 569900 599250 692480 666640 668210 537140 472860 516660 555310 570420 632490 538620 564110 718100 665190 701930 627980 670880 595930 614660 692310 637190 634920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1733999999.9999998 6809 3605 6456 12935;12936;12937 10429;10430;10431 10430 3 9606 Homo sapiens 0.06230686385811168 ELLQESALIR Unmodified 1170.6608 0.66083754 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3;Q5CAQ4;I3L0K7;I3L239 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 4.5 0.5 1 1 55.126 55.166 2 0.00029051 16297 20230619_1883_Aki_TMTPro18x_K_F4 133.23 79.259 418690 349410 392130 440820 373960 377470 407740 403610 477600 478080 472840 501960 532600 451280 415920 647060 582940 636400 386990 320630 400500 436850 390640 387260 411430 412700 482600 479880 488050 507020 536330 477530 435510 645710 556510 604370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 309800000 6810 1211 6457 12938;12939 10432;10433 10432 2 9606 Homo sapiens 0.08233355223273975 ELLQHPFLK Unmodified 1123.639 0.63897988 3839 Q13177;A8K5M4;Q9Y6B5;B2RCU6;O75914-2;O75914;O75914-4;O75914-3 PAK2;PAK3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 3 yes no 0 0 0 1.5 0.5 1 1 52.39 52.41 3 0.00023487 15477 20230619_1881_Aki_TMTPro18x_K_F2 121.83 75.224 372390 318680 340620 371970 328820 360260 358630 354570 381490 426080 414400 395090 444390 366270 398920 480340 428160 442990 344190 292180 348640 371180 343320 365170 360720 364600 388980 425760 424820 401680 450350 384850 408530 478530 409480 421100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1321700000 6811 3839 6458 12940;12941 10434;10435 10435 2 9606 Homo sapiens 0.08210595265359188 ELLSHSAERPER Unmodified 1422.7215 0.72154031 3635 P52735-3;P52735-2;P52735 VAV2 Guanine nucleotide exchange factor VAV2 yes no 0 0 1 3 0.816 1 1 1 31.842 31.909 4 9.5045E-07 6263 20230619_1883_Aki_TMTPro18x_K_F4 155.48 106.74 82640 58887 82100 88487 112370 119840 104520 116430 137740 82859 110920 112910 84224 85760 86040 77829 118560 104090 76349 54175 83941 87302 114140 118670 106850 118230 137130 86534 113900 112330 87039 88890 89200 79849 113020 98636 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71882000 6812 3635 6459 12942;12943;12944 10436;10437 10437 2 9606 Homo sapiens 0.027088405355698342 ELLSSDMKK Unmodified 1049.5427 0.54269624 1610 A0A6M8YHF9;A0A6M8YDW2;A0A6M8YDW1;Q8IUF8-4;Q8IUF8;Q8IUF8-3 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA yes no 0 0 1 7.5 0.5 1 1 46.81 46.878 3 0.012203 12225 20230619_1888_Aki_TMTPro18x_K_F8 69.346 27.805 91302 82519 87092 80721 103320 100730 117980 113620 139520 114330 107100 101430 123530 84932 114780 127180 117510 97233 84447 75525 89032 82028 106350 100720 118710 115160 139590 115150 112110 103060 125020 90445 117080 125420 112260 92744 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66033000 6813 1610 6460 12945;12946 10438 10438 1 9606 Homo sapiens 0.019906596431155776 ELLTEFGYK Unmodified 1098.5597 0.55972651 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 6.33 0.471 2 1 61.319 61.365 3 4.3334E-07 18619 20230619_1886_Aki_TMTPro18x_K_F6 125.16 80 57960 48996 53302 64749 52498 66814 58987 61981 98665 72331 74019 91872 104100 93039 74892 129570 116570 160590 53570 44979 54600 64096 54929 67266 60308 63945 97229 73230 78502 92477 104010 97893 79287 131150 111440 152040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188660000 6814 1417 6461 12947;12948;12949 10439;10440 10439 2 9606 Homo sapiens 0.01438903520556778 ELLTLDEK Unmodified 959.51753 0.51752734 299 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 RPS9 40S ribosomal protein S9 yes no 0 0 0 3.29 1.03 2 2 2 1 54.934 54.967 2;3 9.6794E-05 16316 20230619_1882_Aki_TMTPro18x_K_F3 152.63 79.37 310410 234470 246960 300940 248590 341270 292710 301360 489190 368750 333890 484980 621080 545960 285040 864000 722540 943900 286400 215270 256580 298860 260360 340930 298480 312480 481030 373140 363010 489710 609590 578000 323180 865520 688620 894860 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1273900000 6815 299 6462 12950;12951;12952;12953;12954;12955;12956 10441;10442;10443 10442 3 9606 Homo sapiens 0.036149281121993226 ELLTLDEKDPR Unmodified 1327.6983 0.69834526 299 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 RPS9 40S ribosomal protein S9 yes no 0 0 1 3.5 1.12 1 1 1 1 49.673 49.735 3 8.0517E-05 13984 20230619_1882_Aki_TMTPro18x_K_F3 128.36 90.937 3206200 2819600 2995100 3268700 3155500 3446900 3331400 3422900 3337500 3888100 3671100 3245500 3737400 3001800 3475300 3174100 3004200 2440900 2964500 2584700 3064100 3267100 3269200 3472300 3350300 3510300 3416700 3883600 3751200 3315200 3797300 3113800 3510600 3148000 2875000 2328300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3562199999.9999995 6816 299 6463 12957;12958;12959;12960 10444;10445;10446;10447 10445 4 9606 Homo sapiens 0.04760401698240457 ELLTSFGPLK Unmodified 1103.6227 0.62266112 2658 B5BU25;P26368-2;P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 0 0 0 2 0 1 62.02 62.03 3 0.00014527 19509 20230619_1881_Aki_TMTPro18x_K_F2 121.73 71.693 393860 339920 367480 377830 392390 510530 421270 457890 533010 190830 161920 102340 129900 95154 302920 139830 128140 95036 364120 311500 376030 380290 407240 504740 426370 464070 520780 205120 182160 108070 141730 100850 294430 137830 124070 90862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 438790000 6817 2658 6464 12961 10448 10448 1 9606 Homo sapiens 0.07499469308618245 ELLTTMGDR Unmodified 1034.5066 0.50664508 3147 Q53HL1;J3QRS3;P19105;O14950;Q2F834;Q71U02;Q6IBG1;A0A384NY64;P24844;P24844-2 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 0 0 3.5 0.5 1 1 48.487 48.545 2 0.00032657 13292 20230619_1883_Aki_TMTPro18x_K_F4 139.78 106.39 325350 246690 321340 320850 272710 394220 391680 349400 456350 534000 526360 611550 643850 512050 450410 581830 617460 711540 300680 226520 326210 318870 291090 391790 389970 365050 464430 532060 542240 613490 644050 535520 471360 590400 589820 674110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234560000 6818 3147 6465 12962;12963 10449 10449 1 9606 Homo sapiens -0.009227975337580574 ELLTVGQEHWK Unmodified 1338.6932 0.6932003 1696 A0A7P0T8Z7;A0A7P0Z4A2;A0A7P0Z4A5;A0A7P0T8D4;B2RAU5;A0A7P0T8S8;A0A7P0T8Z2;A0A7P0T8C7;Q9Y5X1;B3KXH8;A0A7P0TBI9;Q59ES5;A0A7P0T8M2 SNX9 Sorting nexin;Sorting nexin-9 yes no 0 0 0 6.5 0.5 1 1 51.821 51.897 3 0.011722 14735 20230619_1886_Aki_TMTPro18x_K_F6 51.979 34.247 52238 49581 54251 46476 52685 72040 69049 61624 72227 63153 56940 65323 66233 56651 69656 62263 68428 71450 48367 45356 54904 47575 55378 70658 68739 63706 72786 63835 59635 65879 67474 59036 70660 63020 65504 67755 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99477000 6819 1696 6466 12964;12965 10450 10450 1 9606 Homo sapiens 0.037401426262931636 ELLVPLTSSMYVPGK Oxidation (M) 1648.8746 0.87459506 4401 Q99471 PFDN5 Prefoldin subunit 5 yes yes 0 1 0 2 0 1 62.017 62.027 3 0.00051468 19506 20230619_1881_Aki_TMTPro18x_K_F2 81.789 65.9 70424 65565 77983 80334 80004 85687 80701 86901 89530 79835 82248 92548 98029 78403 75060 101000 77307 96027 65233 60122 78627 80000 82921 86278 81641 88500 90427 81450 85472 92908 98418 82540 77007 100780 74075 91191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233420000 6820 4401 6467 12966 10451 10451 2761 1 9606 Homo sapiens 0.07611274817122649 ELMDEEDVLQECK Unmodified 1636.696 0.69603835 336 Q5H9R7-5;Q5H9R7;Q5H9R7-2;Q5H9R7-6;Q5H9R7-4;E9PKF6;H7BXH2;A0A024R5F3;Q5H9R7-3;E9PJD8;E9PKG4;E9PNN8 PPP6R3;SAPS3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 0 0 0 1 0 1 57.215 57.215 3 3.1237E-05 17332 20230619_1880_Aki_TMTPro18x_K_F1 116.01 99.379 77159 71530 63561 73661 61598 79841 68002 71365 88868 90440 70595 71533 97549 72306 80789 98142 85793 99556 71302 65489 65739 74317 64477 80082 68845 73986 88717 89826 74471 73510 97846 76008 82821 98225 82133 94494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82575000 6821 336 6468 12967 10452 10452 1 9606 Homo sapiens -0.09684182884052461 ELMGEEILGASLSAPLTSYK Unmodified 2108.0711 0.071122618 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;Q9H8E3;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRU9 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 64.574 64.599 3 4.4547E-05 19749 20230619_1888_Aki_TMTPro18x_K_F8 87.49 67.051 74452 72079 66044 75788 78154 88550 71369 70605 75680 46196 56766 68772 59078 40951 76581 59870 58769 62361 68858 65994 68025 76406 80079 88185 72490 72756 76015 48721 59368 67847 60981 44182 76490 60051 56427 59191 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 667600000 6822 1603 6469 12968;12969 10453;10454 10454 2 9606 Homo sapiens 0.06140990129642887 ELMLHAADVEALQAAK Unmodified 1708.8818 0.8818057 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 5.5 0.5 1 1 57.188 57.254 3 2.1477E-14 16969 20230619_1886_Aki_TMTPro18x_K_F6 171.91 153.31 63834 52916 63506 69599 59610 74000 68414 64280 81889 71343 71274 71430 84032 63757 75913 87920 75881 76971 59028 48579 64527 68955 62543 74247 68884 66556 82227 71762 74190 72286 84922 67317 77402 87316 72610 73220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109590000 6823 3440 6470 12970;12971 10455 10455 1 9606 Homo sapiens 0.055720074175951595 ELMNLTGTIPVPYR Unmodified 1602.844 0.84396364 4407 Q99816;F5H442;L0L6B6 TSG101 Tumor susceptibility gene 101 protein yes no 0 0 0 2.5 0.5 1 1 62.405 62.424 3 0.00024311 19445 20230619_1882_Aki_TMTPro18x_K_F3 71.031 54.777 115910 76355 105890 116570 104080 137450 99000 106470 128530 111440 108460 113050 127380 107770 110060 141140 122160 132330 106970 70285 108450 114610 108380 136580 101080 111040 128480 112480 113080 114570 128600 113100 113060 140700 116840 125740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114420000 6824 4407 6471 12972;12973 10456 10456 1 9606 Homo sapiens 0.06665541222787397 ELMQVVLAR Unmodified 1057.5954 0.59540051 11 A0A2R8YGH5;A0A024QYT6;P61966;H7C1E4;P61966-2 AP1S1 AP-1 complex subunit sigma-1A yes no 0 0 0 1.5 0.5 1 1 58.267 58.274 2 0.01601 17818 20230619_1880_Aki_TMTPro18x_K_F1 74.269 51.882 25103 24135 27361 31607 23622 31159 35230 28378 35164 35610 33261 25758 34178 30882 35599 34510 34892 45145 23255 22144 27591 31289 25165 31465 34829 29398 35755 35317 34218 26794 34932 31905 36133 35214 33462 42729 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180920000 6825 11 6472 12974;12975 10457 10457 1 9606 Homo sapiens 0.0689066249658481 ELNDLAR Unmodified 829.42938 0.42938104 3726 P62837 UBE2D2 Ubiquitin-conjugating enzyme E2 D2 yes yes 0 0 0 2.5 0.5 1 1 41.137 41.205 2 0.013784 10134 20230619_1882_Aki_TMTPro18x_K_F3 113.5 40.46 132970 95572 115170 119690 130770 131520 127050 116330 182300 123050 150140 143390 151480 126780 129340 142840 172810 156290 122730 87744 118710 119040 134540 131790 129980 120130 181090 124780 155530 144140 153560 132190 134380 144000 164810 148360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265700000 6826 3726 6473 12976;12977 10458 10458 1 9606 Homo sapiens 0.00784352312223291 ELNEDKLEK Unmodified 1116.5663 0.56626845 2138 A8K9K6;O00567;A0PJ92;A0A494C128;Q5JXT2 NOP56 Nucleolar protein 56 yes no 0 0 1 3 0.816 1 1 1 44.246 44.312 3 0.05321 11408 20230619_1883_Aki_TMTPro18x_K_F4 51.567 15.142 401320 215590 486800 514220 528460 555840 444380 525070 572090 540400 766890 915500 758850 662650 635520 456650 899660 920580 370950 200040 488070 494720 543140 557710 457470 539000 583040 556600 778100 902700 769090 681360 661910 488800 858380 869380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288730000 6827 2138 6474 12978;12979;12980 10459 10459 1 9606 Homo sapiens 0.012647966812892264 ELNHPNIVK Unmodified 1062.5822 0.58219329 653 A0A024RB77;G3V5T9;P24941;A0A024RB10;P24941-2 CDK2 Cyclin-dependent kinase 2 yes no 0 0 0 6.5 0.5 1 1 40.236 40.314 3 0.0034753 9383 20230619_1887_Aki_TMTPro18x_K_F7 80.986 43.795 208890 143980 182350 181480 214790 250560 198090 204500 267750 208360 240270 200140 240480 196510 198320 273260 240470 190640 192760 132220 187930 181080 220400 247010 202860 212130 267540 210320 247470 203770 243420 206790 205130 268550 229330 182130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 261140000 6828 653 6475 12981;12982 10460 10460 1 9606 Homo sapiens 0.05340547708851773 ELNITAAK Unmodified 858.48108 0.48108226 3703 P62081;B5MCP9;A0A2R8Y623 RPS7 40S ribosomal protein S7 yes no 0 0 0 6.5 1.12 1 1 1 1 47.657 47.733 2 0.0012811 12466 20230619_1887_Aki_TMTPro18x_K_F7 145.13 59.119 689580 521670 530110 575740 744850 706300 703820 666980 920110 736460 824730 762000 885000 711430 684630 849140 900420 755410 636110 478260 555150 578870 755440 703880 718350 685940 920850 741880 852570 771150 891750 742840 712450 845460 858430 719010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3374099999.9999995 6829 3703 6476 12983;12984;12985;12986 10461 10461 1 9606 Homo sapiens 0.04618096006140604 ELNLSFCEIK Unmodified 1251.6169 0.61692381 162 A0A024R1U0;P46060;B4DY16;B4E0U0;H0Y4Q3 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 0 6.5 0.5 1 1 60.571 60.621 3 0.00044786 18037 20230619_1887_Aki_TMTPro18x_K_F7 104.94 83.572 65431 51332 54049 66870 57571 72869 72580 73303 81210 85017 67978 59935 84820 63739 57020 101390 73054 75289 60400 47130 56004 66313 60027 73207 72557 75145 81790 84532 71022 62191 84677 67639 59606 99679 69758 71778 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200390000 6830 162 6477 12987;12988 10462 10462 1 9606 Homo sapiens 0.0011800273462085897 ELNLTEHFGK Unmodified 1186.5982 0.59823728 3315 O75691 UTP20 Small subunit processome component 20 homolog yes yes 0 0 0 5.5 0.5 1 1 49.171 49.248 3 0.046642 13588 20230619_1886_Aki_TMTPro18x_K_F6 46.844 6.9268 121590 94975 140320 150810 120610 148390 169800 133730 153240 132360 158440 146040 173940 153210 153360 186850 203640 161880 112540 87404 140800 147600 128130 149790 167790 137770 157140 134340 162930 148070 176150 159510 159240 185740 194060 154170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172180000 6831 3315 6478 12989;12990 10463 10463 1 9606 Homo sapiens 0.012402091550939076 ELNLVLSVR Unmodified 1041.6182 0.61824444 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 4 0.816 1 1 1 58.158 58.188 2 0.033798 17213 20230619_1885_Aki_TMTPro18x_K_F5 69.915 19.954 41481 39729 40973 44807 33162 46603 49124 45836 50185 50672 40522 41291 43556 43413 50237 52554 45066 45344 38393 36399 41590 44867 35560 46956 48629 47016 50703 50673 42198 42416 44720 45165 50696 52261 43170 43143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88326000 6832 3606 6479 12991;12992;12993 10464 10464 1 9606 Homo sapiens 0.09910004885705348 ELNPEEGEMVEEK Unmodified 1531.6712 0.67120381 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;A0A804HL78;O94854 MACF1;KIAA0754 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5;Uncharacterized protein KIAA0754 yes no 0 0 0 1 0 1 50.066 50.066 3 4.0767E-06 14370 20230619_1880_Aki_TMTPro18x_K_F1 129.77 112.56 36209 27167 32261 37440 30868 39937 38589 34655 45310 46882 37663 42167 47454 40039 38870 48701 48278 54724 33434 24963 33120 36981 32443 40053 38654 36109 45514 46593 39459 42924 47726 41851 40252 49104 46146 51890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34541000 6833 1566 6480 12994 10465 10465 1 9606 Homo sapiens -0.07336494695096007 ELNPSLNFK Unmodified 1060.5553 0.55530983 1957 A5YKK6;A5YKK6-2;A5YKK6-3;A5YKK6-4;B4DTM8 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 8 0 1 54.153 54.225 2 1.2097E-06 15367 20230619_1888_Aki_TMTPro18x_K_F8 157.99 104.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6834 1957 6481 12995 10466 10466 1 9606 Homo sapiens 0.02745439097657254 ELNQHLR Unmodified 908.48281 0.48281359 482 I3L2F8;A0A024R804;A8WFP5;A0A024R8X1;O60675;O15525 MAFG;MAFK;hCG_1991559 Transcription factor MafK;Transcription factor MafG yes no 0 0 0 4.5 0.5 1 1 30.753 30.823 3 0.0023875 5977 20230619_1885_Aki_TMTPro18x_K_F5 120.65 76.837 30030 20170 26944 29094 30517 36816 32739 31644 47747 30379 33438 29276 41979 30335 27949 33065 38857 35845 27713 18552 27699 28736 31536 36504 33325 32650 47169 30787 35304 29831 41884 31435 29293 33325 37051 34028 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17438000 6835 482 6482 12996;12997 10467 10467 1 9606 Homo sapiens 0.024911498147503153 ELNVSFINEK Unmodified 1191.6136 0.61355299 2732 C9J050;C9JEJ2;P49585;B4E322;B2R8P1;Q9Y5K3-2;Q9Y5K3-4;Q9Y5K3-3;Q9Y5K3 PCYT1A;PCYT1B Choline-phosphate cytidylyltransferase A;Choline-phosphate cytidylyltransferase B yes no 0 0 0 6 0 1 56.778 56.85 3 8.877E-05 16828 20230619_1886_Aki_TMTPro18x_K_F6 116.55 75.263 45446 35875 38147 46556 43315 49318 46935 45032 57881 47956 45662 48382 55552 43850 50066 57631 52985 58575 41957 32936 39490 46157 44725 49556 47434 46393 57851 48350 47879 48953 56108 46131 51211 57720 50706 55604 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26009000 6836 2732 6483 12998 10468 10468 1 9606 Homo sapiens 0.025410759522856097 ELNYFAK Unmodified 883.44397 0.44396847 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DWQ3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 8 0 1 52.652 52.727 2 0.0074301 14687 20230619_1888_Aki_TMTPro18x_K_F8 125.25 73.465 875310 736980 764950 799970 881390 903830 849050 857800 946520 1005400 1127000 1039500 1249900 987480 1072000 1221200 1207900 1123400 808680 675280 788060 804400 905230 905540 861290 883380 966400 1009200 1152500 1052700 1262700 1032900 1101500 1217600 1153800 1068300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2066099999.9999998 6837 3374 6484 12999 10469 10469 1 9606 Homo sapiens -0.002415755396214081 ELPAAEPVLSPLEGTK Unmodified 1649.8876 0.88760259 4336 Q96DI9;Q9BY77;F6VRR5;B4E0L0;Q9BY77-2;B4DMM2 POLDIP3 Polymerase delta-interacting protein 3 yes no 0 0 0 4.5 1.12 1 1 1 1 60.737 60.771 3 2.8082E-11 18237 20230619_1885_Aki_TMTPro18x_K_F5 159.22 134.93 93201 79861 86142 107340 91285 112880 103230 92853 126920 107300 103520 118130 112550 99703 112210 116770 128380 129130 86151 73324 88319 106150 94877 113230 104080 96698 126990 108060 107830 118750 114620 104350 115020 117750 122680 122520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 359470000 6838 4336 6485 13000;13001;13002;13003 10470;10471 10471 2 9606 Homo sapiens 0.08865429200886865 ELPAAVAPAGPASLAR Unmodified 1489.8253 0.8252771 1052 A0A0K0K1K7;O95336;M0R261;M0R0U3 PGLS 6-phosphogluconolactonase yes no 0 0 0 8 0 1 52.435 52.512 3 5.2291E-08 14623 20230619_1888_Aki_TMTPro18x_K_F8 90.498 73.866 42403 29578 46797 51724 64644 71887 51188 57253 71020 47595 49290 55193 55774 40987 53303 66607 77725 66157 39207 27269 47467 50625 65403 70783 53005 59221 70321 48898 51920 55236 56606 44126 55660 66446 74050 62884 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238050000 6839 1052 6486 13004 10472 10472 1 9606 Homo sapiens 0.09995747643233699 ELPDLEDLMK Unmodified 1201.59 0.59004036 2121 B4DX01;A8K8F0;Q9HC38-2;Q9Y3E8;Q9HC38;B3KV49;B7Z403 GLOD4 Glyoxalase domain-containing protein 4 yes no 0 0 0 3 0 1 63.497 63.528 2 0.0062553 19893 20230619_1882_Aki_TMTPro18x_K_F3 86.18 51.927 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6840 2121 6487 13005 10473 10473 1 9606 Homo sapiens -0.0026910587657766882 ELPDPQESIQR Unmodified 1310.6466 0.64664404 2791 CON__Q0IIK2;CON__Q29443 yes no 0 0 0 2 0 1 45.543 45.624 2 0.0057242 12404 20230619_1881_Aki_TMTPro18x_K_F2 85.807 65.478 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6841 2791 6488 13006 10474 10474 1 0.0037465800432983087 ELPDVLER Unmodified 969.51311 0.51311067 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 2 0 1 51.625 51.67 2 0.00106 15174 20230619_1881_Aki_TMTPro18x_K_F2 149.91 87.197 151100 133500 142470 156710 148730 165070 179480 170050 213820 179530 183380 180130 184560 161890 184150 205020 203800 209090 139720 122390 145640 156500 154880 166420 180180 173660 214570 181020 189640 182280 188380 169870 188470 205500 194840 198530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105370000 6842 3598 6489 13007 10475 10475 1 9606 Homo sapiens 0.027134636892810704 ELPEFVVYQEIVETTK Unmodified 1922.9877 0.98771056 2975 F5H3Y4;Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 yes no 0 0 0 5.5 0.5 1 1 65.319 65.363 3 0.0095203 20334 20230619_1885_Aki_TMTPro18x_K_F5 64.136 44.558 5965.9 4525.7 4672.3 5188.6 5363.4 4726.3 5238.4 5306.7 5553.6 7300.9 6909.8 7028.2 6998.7 5902.5 7071.1 7413.9 6650.3 8239.8 5504.1 4150.5 4865.3 5181.4 5506.7 4832.9 5301 5434.6 5703.6 7258.7 7031.7 7107 7141.6 6208 7168.5 7470.8 6378 7811.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41026000 6843 2975 6490 13008;13009 10476 10476 1 9606 Homo sapiens 0.06313621744016018 ELPEPTPVK Unmodified 1008.5492 0.54916182 2814 D3DS96;Q9NRL2-2;Q9NRL2;Q59G54 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 0 0 0 4 0 1 47.738 47.779 3 0.0085035 12982 20230619_1883_Aki_TMTPro18x_K_F4 59.153 46.526 143220 111920 107730 113030 175360 313810 159110 154110 374380 96657 93952 103940 134480 106530 103380 153360 127970 113260 132120 102520 113610 116560 177890 298080 167630 166800 357150 101830 111320 105430 134620 112240 107300 150970 122100 108050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98922000 6844 2814 6491 13010 10477 10477 1 9606 Homo sapiens 0.0452292086615671 ELPEQLQEHAIEDK Unmodified 1677.821 0.82097959 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z5X3;B7Z2H3 SAFB Scaffold attachment factor B1 yes no 0 0 0 2.5 0.5 1 1 49.663 49.722 3 5.3173E-12 14311 20230619_1881_Aki_TMTPro18x_K_F2 185.14 132.59 139660 88586 93859 136350 107760 172440 117880 147950 205010 174360 168910 233270 232670 230360 126940 339920 309460 383400 128610 81566 99682 134090 111840 170850 120960 153470 202480 176730 178050 234160 230910 243400 142220 341500 294830 363420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 266820000 6845 2020 6492 13011;13012 10478;10479 10478 2 9606 Homo sapiens 0.009181936389950351 ELPESGIQLGTPR Unmodified 1395.7358 0.73579339 2898;4664 E7ERK9;Q9UI10;Q9HBP7;F8W8L6;Q9UI10-3;Q9UI10-2;Q71US4;B4DUP5;Q59FC8 EIF2B4 Translation initiation factor eIF-2B subunit delta no no 0 0 0 4.5 0.5 1 1 50.954 51.007 2 6.2766E-06 14183 20230619_1885_Aki_TMTPro18x_K_F5 173.6 127.59 51282 45477 47443 53072 51540 62533 58293 57915 60486 66373 65823 60979 73612 61174 64274 75723 74236 81797 47414 41690 48621 53098 53437 62403 58457 59701 61753 66460 67593 62193 74434 63896 66138 76161 70984 77599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129790000 6846 2898;4664 6493 13013;13014 10480 10480 1 9606 Homo sapiens 0.05375492963844408 ELPETDADLK Unmodified 1129.5503 0.55028404 4615 Q9NWY4;A8MVJ9 C4orf27 UPF0609 protein C4orf27;Putative UPF0609 protein C4orf27-like yes no 0 0 0 2 0 1 49.346 49.404 2 0.0060088 14166 20230619_1881_Aki_TMTPro18x_K_F2 87.149 49.421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6847 4615 6494 13015 10481 10481 1 9606 Homo sapiens -0.009309095556318425 ELPEYYELIR Unmodified 1323.6711 0.67106787 1348;1872 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YF80;B4E0F1;B4DSI8;B3KNW7;A0A2R8Y523;A0A2R8Y5K3;K7EQF0;A0A2R8YFK5;B4DSC8;K7EP28;A0A994J7D9;A0A0U1RRF5;A0A994J4C9;A0A0U1RRF8;A0A0A0MSS5;F6UH26;A0A0U1RQU0;A0A0U1RR09;F6XE55;A0A0U1RRN2;A0A0U1RQW7;B1ALG1;B4DNT1;B1ALF6;Q8N9Q1;A0A0U1RR83;A0A1W2PS06;A0A0U1RRG6;A0A0U1RR26;B1ALG2;F6T8Q0;A0A0U1RQX3;A0A0U1RRD6;A0A994J4Z7;P51531-2;P51531;A0A994J501;F6VDE0 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 0 4 0.816 1 1 1 60.465 60.492 2 1.0978E-05 18495 20230619_1883_Aki_TMTPro18x_K_F4 165.15 119.27 125180 101180 103640 127180 101370 122270 118390 112660 138880 144900 141800 135600 141080 126160 139020 160290 143700 156330 115580 92849 107190 126200 106090 123780 119010 116670 140490 144440 145290 137800 143950 132240 141780 160250 137530 148480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116030000 6848 1348;1872 6495 13016;13017;13018 10482 10482 1 9606 Homo sapiens 0.022179181578621865 ELPGHTGYLSCCR Unmodified 1548.6813 0.68133176 3730;4542 Q6FHM2;P62879;C9JIS1;C9JXA5;C9JZN1;E7EP32;P62879-2;Q9HAV0;A0A7I2S2S9;A8K3F6;H7C5J5;A0A6Q8PFW8;A0A6Q8PFE0;A0A6Q8PFV8;A0A6Q8PG88 GNB2;GNB4 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein subunit beta-4 no no 0 0 0 7.5 0.5 1 1 39.834 39.861 3 1.4416E-15 9167 20230619_1887_Aki_TMTPro18x_K_F7 199.96 186.3 113220 85178 115310 126530 127480 134960 123950 121410 134020 99601 118780 120930 113880 89936 127450 120860 122000 117390 104660 78335 117200 124430 131300 135490 125510 124440 135240 102520 122440 120800 116980 95433 129020 120790 116750 111550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 335070000 6849 3730;4542 6496 13019;13020 10483 10483 1 9606 Homo sapiens -0.07106165450841218 ELPGQTLHWGPEATEAAGR Unmodified 2018.981 0.98100248 1039 A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160;Q14160-3;A0A0G2JMS7;Q14160-2;A0PJK8;H0YCG0 SCRIB Protein scribble homolog yes no 0 0 0 4 0 1 50.386 50.418 3 2.387E-10 14191 20230619_1883_Aki_TMTPro18x_K_F4 131.13 125.87 42958 35282 44785 45802 42095 49805 44839 50618 54315 58937 54361 55445 57988 49419 56842 56862 54321 61942 39737 32387 45309 45447 44046 50066 45376 51853 54843 58998 55946 56222 59007 51585 57684 57309 52051 58751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64074000 6850 1039 6497 13021 10484 10484 1 9606 Homo sapiens 0.012271216360204562 ELPPDQAEYCIAR Unmodified 1560.7242 0.72424243 387;1069 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A7I2V4Y4;H9KV75;B7Z565;B4DFY0;B3KUX9;A1L0V1;H0YJW3;F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3;A0A0S2Z3X3;A0A0S2Z3C0 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 no no 0 0 0 2 0 1 48.624 48.689 3 0.0028988 13824 20230619_1881_Aki_TMTPro18x_K_F2 81.278 70.462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6851 387;1069 6498 13022 10485 10485 1 9606 Homo sapiens -0.03369072121768113 ELPPFWEQR Unmodified 1200.5928 0.59275797 1003 Q59GQ7;A0A0C4DGA6;Q14527-2;Q14527;A8K5B6;Q05DF7;Q05DQ5;Q05BZ6 HLTF Helicase-like transcription factor yes no 0 0 0 5.5 0.5 1 1 58.169 58.232 2 0.015582 17201 20230619_1885_Aki_TMTPro18x_K_F5 75.043 30.596 88809 75672 89345 102670 83074 85802 91158 85768 104680 111520 115620 111080 126810 98609 110640 129320 129800 138520 82144 69486 90688 101220 86965 88061 91891 88373 106360 111310 118560 112400 128250 103820 113960 129910 124070 131440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 126330000 6852 1003 6499 13023;13024 10486;10487 10486 2 9606 Homo sapiens 0.00048530363278587174 ELPQFATGENLPR Unmodified 1470.7467 0.74669243 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;Q9BZZ5-5;Q9BZZ5-6;B4DDR3;Q9BZZ5-3 API5 Apoptosis inhibitor 5 yes no 0 0 0 6 0 1 54.048 54.125 3 2.8598E-11 15662 20230619_1886_Aki_TMTPro18x_K_F6 141.82 117.31 65363 57802 67651 74285 68025 79749 82702 75933 94275 84032 83811 77953 80751 64827 85308 79886 75830 66963 60488 53039 68594 73727 71055 80125 82869 78074 94940 84327 86330 78974 82690 68102 86111 79346 72584 63771 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142280000 6853 4478 6500 13025 10488 10488 1 9606 Homo sapiens 0.03014895338151291 ELPQVSFVK Unmodified 1045.5808 0.5807963 1180 A0A140VJK1;O76003 GLRX3 Glutaredoxin-3 yes no 0 0 0 4.5 3.5 1 1 57.22 57.246 2 0.00053834 16639 20230619_1888_Aki_TMTPro18x_K_F8 147.4 71.551 203960 164740 183440 199870 185680 223220 213900 205580 246400 247460 238360 219590 253520 203860 215940 271280 242570 252370 188420 151120 188210 199260 193670 223520 215030 212360 248940 247040 245440 223770 256420 214440 222030 270300 231900 239870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 276000000 6854 1180 6501 13026;13027 10489;10490 10490 2 9606 Homo sapiens 0.05982913620096042 ELPTAFDYVEFTR Unmodified 1586.7617 0.76167379 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 5 0.816 1 1 1 62.856 62.883 2 6.2044E-26 19408 20230619_1886_Aki_TMTPro18x_K_F6 210.35 178.03 78795 56826 69800 85693 54403 91732 92778 77127 98747 96689 92749 106360 106450 102140 107300 124500 107330 125800 72737 52279 71578 84178 59016 91851 91454 80394 100020 97003 96170 107380 108330 106630 109200 124770 102820 119410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 435970000 6855 1022;3868 6502 13028;13029;13030 10491;10492 10492 2 9606 Homo sapiens -0.00823657584578541 ELPTVVFR Unmodified 959.54402 0.54401687 219 A0A024R2Z6;Q9BVP2-2;Q9BVP2 GNL3 Guanine nucleotide-binding protein-like 3 yes no 0 0 0 7.5 0.5 1 1 54.738 54.803 2 0.065872 15655 20230619_1888_Aki_TMTPro18x_K_F8 68.787 37.484 102120 82498 106020 110880 96947 125190 118630 115770 129190 130040 124120 132540 143830 121390 133530 144950 145070 172390 94454 75761 107300 109810 102130 125220 118700 119310 130860 130740 128530 134050 145690 126890 136670 146770 138880 163340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253580000 6856 219 6503 13031;13032 10493 10493 1 9606 Homo sapiens 0.06262661794187352 ELPVNAQNYVR Unmodified 1301.6728 0.67279921 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 0 0 7 0.816 1 1 1 48.47 48.547 2 1.1667E-08 12908 20230619_1887_Aki_TMTPro18x_K_F7 197.27 157.61 379440 256230 279470 333580 316290 388110 344510 350880 364600 404710 401190 364180 423640 345030 401870 485370 408370 412190 349710 235400 293130 331120 326940 387330 346400 362400 372030 404860 410680 371230 430500 363960 409870 481150 390690 392260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 440840000 6857 351 6504 13033;13034;13035 10494 10494 1 9606 Homo sapiens 0.03402971966465884 ELPWPPTFEK Unmodified 1242.6285 0.62847478 2654 B4E357;Q5JPB8;Q53HL4;Q53GT4;G3V1D3;G3V180;Q9NY33-4;Q9NY33 DKFZp686O1117;DPP3 Dipeptidyl peptidase 3 yes no 0 0 0 7.5 0.5 1 1 62.175 62.207 3 0.076704 18717 20230619_1888_Aki_TMTPro18x_K_F8 40.154 17.956 37025 34013 37850 39685 31221 37615 35597 39149 39789 41087 44577 46879 45656 39797 45416 51179 45963 49028 34269 31177 38292 39597 33097 38229 35802 39943 40495 41585 45581 47099 46555 41874 46250 51111 43993 46578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48668000 6858 2654 6505 13036;13037 10495 10495 1 9606 Homo sapiens 0.016865678202748313 ELQAAQAR Unmodified 885.46683 0.46682918 2790 CON__Q03247;A0A0S2Z3V0;A0A346DBY2;J9ZVQ3;A0A0S2Z3D5;P02649;D9ZB55;Q6LBZ1;E9PEV4;E7ERP7;H0Y7L5 APOE Apolipoprotein E yes no 0 0 0 3.5 0.5 1 1 32.725 32.789 2 0.0041195 6688 20230619_1882_Aki_TMTPro18x_K_F3 117.39 65.119 + 11965 11122 17913 16851 30539 36982 22065 25751 30282 22304 59296 84484 24458 35145 68065 17093 81656 96244 11119 10223 17891 16793 30520 35587 23019 26998 31419 24592 58180 81123 28251 36934 68913 22038 78098 90521 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25700000 6859 2790 6506 13038;13039 10496 10496 1 9606 Homo sapiens 0.019514435778546613 ELQAEQEDR Unmodified 1116.5047 0.50473083 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;Q6ZS03;B4DKR8;Q96CF6;Q2HJC8 HDLBP Vigilin yes no 0 0 0 1 0 1 33.574 33.574 2 6.4223E-05 7410 20230619_1880_Aki_TMTPro18x_K_F1 161.44 128.83 48848 27096 66914 70332 94045 102820 72912 87972 90116 59389 89047 115880 85488 78995 94064 36754 100880 103070 45216 25180 66896 67797 94941 101070 75318 90102 90673 63299 91464 113640 87809 80498 95546 41524 96470 97182 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52328000 6860 292 6507 13040 10497 10497 1 9606 Homo sapiens -0.04886135018000459 ELQAHGADELLK Unmodified 1322.683 0.68302954 3234 Q53R19;O15144;Q9BXV5;C9JTV5;G5E9J0 ARPC2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 3.5 0.5 1 1 46.653 46.714 3 0.00017376 12503 20230619_1883_Aki_TMTPro18x_K_F4 101.39 72.432 132300 106570 109560 123430 112620 155720 140290 155290 195950 161380 172790 188580 218080 146720 156210 253360 195840 213990 122150 97717 113370 123710 117890 154920 141550 158760 195460 163640 180380 188950 217990 158450 162670 250360 187120 203600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 590680000 6861 3234 6508 13041;13042 10498 10498 1 9606 Homo sapiens 0.03459534901048755 ELQAQIAELQEDFESEK Unmodified 2005.948 0.94803059 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 0 3 0 1 64.343 64.375 3 0.00021211 20309 20230619_1882_Aki_TMTPro18x_K_F3 84.035 62.802 7925.2 8845.4 8789.2 9066.9 6870.3 10238 9711.4 10054 12085 9859.7 13189 11318 14429 11385 9618.4 14382 13056 14159 7351.5 8093.5 8833.8 9159.2 7385.7 10257 9703.7 10278 12206 10026 13514 11445 14454 11904 10082 14377 12466 13447 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16326000 6862 3549 6509 13043 10499 10499 1 9606 Homo sapiens -0.014705499973388214 ELQCLTPR Unmodified 1015.5121 0.51206481 315 A0A024R4Z6;Q08945;E9PMD4 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 6 0.816 1 1 1 44.069 44.154 2 0.0093246 11248 20230619_1886_Aki_TMTPro18x_K_F6 96.331 64.397 422280 356620 390640 403450 473130 498590 450260 446960 570240 451130 494200 453610 523790 423760 522610 482910 543840 466360 390310 326880 400740 404930 484380 495920 458970 460250 570820 456110 511710 459600 533480 441320 532350 483600 519600 443410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 888600000 6863 315 6510 13044;13045;13046 10500;10501 10501 2 9606 Homo sapiens 0.00492926048730169 ELQDAQEHDAR Unmodified 1310.5851 0.58510641 2582 B4DST5;Q9H3S7;B4DJ12 PTPN23 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type 23 yes no 0 0 0 1 0 1 30.178 30.178 3 2.2667E-12 6073 20230619_1880_Aki_TMTPro18x_K_F1 173.37 126.18 9182.3 6205.6 14730 16304 21090 23122 18220 17264 15238 14875 19708 25424 18120 17078 20371 9492 25507 22346 8523.8 5762.5 14609 15696 21298 22708 18448 17986 15870 15478 19989 25005 18665 17494 20894 10418 24333 21099 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18568000 6864 2582 6511 13047 10502 10502 1 9606 Homo sapiens -0.05776273694959855 ELQDLALQGAK Unmodified 1184.6401 0.6401021 3428 P10645;G5E968;Q86T07 CHGA Chromogranin-A;Vasostatin-1;Vasostatin-2;EA-92;ES-43;Pancreastatin;SS-18;WA-8;WE-14;LF-19;Catestatin;AL-11;GV-19;GR-44;ER-37;GE-25;Serpinin-RRG;Serpinin;p-Glu serpinin precursor yes no 0 0 0 5.5 0.5 1 1 54.757 54.829 3 4.1312E-05 15761 20230619_1885_Aki_TMTPro18x_K_F5 133.91 90.604 75018 72072 79895 143730 67047 66342 108470 110340 111610 122320 117390 109650 128340 98237 81694 122510 122170 102740 69480 66497 80960 138070 71659 73889 107060 110120 113790 122510 120540 111530 128370 103030 86344 121500 116360 97867 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 287990000 6865 3428 6512 13048;13049 10503 10503 1 9606 Homo sapiens 0.05516764843605415 ELQEESGLTVDALHK Unmodified 1667.8366 0.83662965 486 A0A024R819;A0A024R858;P36639;P36639-3;P36639-2;P36639-1 NUDT1 7,8-dihydro-8-oxoguanine triphosphatase yes no 0 0 0 3.5 1.12 1 1 1 1 51.593 51.646 3 0.00032071 14891 20230619_1882_Aki_TMTPro18x_K_F3 90.099 69.636 123430 109080 122430 118620 96820 148880 116300 119190 155680 134500 137080 128400 153640 106210 129740 163340 150030 149380 114180 99933 124090 119440 103520 147490 117400 124210 155580 134990 142150 129970 155010 113410 133650 162320 143350 142040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 661180000 6866 486 6513 13050;13051;13052;13053 10504 10504 1 9606 Homo sapiens 0.029424801560480773 ELQELQDSLNAER Unmodified 1543.7478 0.74781464 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 2 0 1 56.299 56.318 3 1.8688E-15 17125 20230619_1881_Aki_TMTPro18x_K_F2 154.86 130.58 36411 28509 33426 35792 35071 39439 38275 39176 43499 40084 40528 40785 44230 35147 42619 42512 42381 48778 33636 26165 34244 35597 36401 39595 38572 40062 43901 40486 41892 41184 44930 36856 43355 42952 40597 46240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15594000 6867 3440 6514 13054 10505 10505 1 9606 Homo sapiens -0.002309350836185331 ELQELVQYPVEHPDK Unmodified 1822.9101 0.91012895 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;Q9NTC4;Q9HAP0 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 4.5 1.12 1 1 1 1 55.393 55.441 3 8.2343E-19 16369 20230619_1883_Aki_TMTPro18x_K_F4 202.34 165.19 595780 513740 581530 601760 581140 671970 674390 659080 681030 803360 765500 749010 822790 654830 777360 822290 721190 798440 550970 471010 592120 601550 606290 673910 674920 677990 697510 802230 783950 759640 835280 687700 788460 822200 691110 758330 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1066799999.9999999 6868 3656 6515 13055;13056;13057;13058 10506;10507;10508;10509 10507 4 9606 Homo sapiens 0.03159028598497571 ELQEQLK Unmodified 886.476 0.47599688 81 A0A024R071;O75694;B4DLT2;O75694-2 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 3.5 0.5 1 1 44.722 44.781 2 0.033771 11608 20230619_1883_Aki_TMTPro18x_K_F4 96.711 0 89393 67821 92791 92159 117480 123730 111380 105670 143180 111910 129520 132990 134080 117300 109140 97768 164090 133090 82647 62306 94343 91462 119900 122300 113600 109370 143420 113500 133710 133440 135590 120520 114360 100600 156250 126150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103590000 6869 81 6516 13059;13060 10510 10510 1 9606 Homo sapiens 0.02821792143527091 ELQHAALGGTATR Unmodified 1323.6895 0.6895119 3224 Q6FHJ5;O14828-2;O14828 SCAMP3 Secretory carrier-associated membrane protein 3 yes no 0 0 0 6 0.816 1 1 1 35.283 35.355 3 7.5572E-08 7735 20230619_1886_Aki_TMTPro18x_K_F6 132.24 93.281 128140 75233 149610 137700 152170 160380 158950 171140 87503 122970 171050 205780 174810 181080 177530 99059 223470 186050 118440 69462 150150 134190 157710 160590 157850 172800 96613 129210 172060 204080 178640 183190 182530 106040 213110 175920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 394340000 6870 3224 6517 13061;13062;13063 10511;10512;10513 10512 3 9606 Homo sapiens 0.04061472852413317 ELQHELFR Unmodified 1070.5509 0.55089316 1494 A0A384P5W4;Q15058 KIF14 Kinesin-like protein KIF14 yes no 0 0 0 4 0 1 43.004 43.048 3 0.00076775 10849 20230619_1883_Aki_TMTPro18x_K_F4 122.28 85.588 59553 47303 66430 67711 72451 75397 76860 79232 95698 70079 79657 70906 95563 71229 70147 82924 86792 74228 55109 43474 67008 66798 74864 75732 77819 80421 95711 71394 83090 72031 95767 74118 72758 82628 82794 70640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13698000 6871 1494 6518 13064 10514;10515 10514 2 9606 Homo sapiens 0.01843974674761739 ELQLIPDQLR Unmodified 1223.6874 0.68738664 1845 Q99567;J3KMX1;A0A8V8TPS0;A0A8V8TPT0;A0A8V8TQB1;A0A8V8TQZ0;A0A8V8TQC3;A0A8V8TQC2;A0A8V8TRA5;A0A8V8TPT4;A0A8V8TQA5;B4DP20;A0A8V8TQD5 NUP88 Nuclear pore complex protein Nup88 yes no 0 0 0 6 0 1 58.759 58.825 2 0.0015475 17656 20230619_1886_Aki_TMTPro18x_K_F6 105.52 64.672 71554 51219 59159 68711 64106 71494 67990 79047 84245 70290 81875 77198 82889 66312 77605 87858 82974 93733 66018 47059 61257 67982 66363 72237 68860 79969 84755 71723 84126 77757 84289 69928 79365 88234 79411 88926 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27207000 6872 1845 6519 13065 10516 10516 1 9606 Homo sapiens 0.08449044114604476 ELQMHSHLLK Oxidation (M) 1250.6441 0.64414162 4364 Q96HY7;H7C149 DHTKD1 Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial yes no 0 1 0 7.5 0.5 1 1 37.222 37.248 4 0.0063197 8186 20230619_1887_Aki_TMTPro18x_K_F7 73.632 54.019 55593 44879 46581 52376 65111 64351 54291 55310 75211 45530 59803 53883 47871 49375 54880 52173 58087 56910 51332 41155 48367 52431 65879 63982 56000 56871 74708 46865 61526 54213 49640 51190 55845 52665 55538 54007 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61979000 6873 4364 6520 13066;13067 10517 10517 2747 1 9606 Homo sapiens 0.028845310656834044 ELQNEVEK Unmodified 987.48729 0.48728985 4183 Q86U42-2;Q86U42;Q92843-2;A0A7I2V383;B4DEH8;G3V4T2 PABPN1 Polyadenylate-binding protein 2 yes no 0 0 0 2 0 1 42.663 42.744 2 0.0021376 11086 20230619_1881_Aki_TMTPro18x_K_F2 116.3 36.066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6874 4183 6521 13068 10518 10518 1 9606 Homo sapiens -0.0069543055299163825 ELQPQQQPR Unmodified 1122.5782 0.57817054 1289 P55196-5;A8MQ02;P55196;P55196-1;H0Y8U8;A0A804HJ20;A0A1P7ZIN0;G1UI22;J3KN01;P55196-2;P55196-6;P55196-3;Q5TIG5;H0Y948 MLLT4 Afadin yes no 0 0 0 3 0 1 33.207 33.278 2 0.00097201 6866 20230619_1882_Aki_TMTPro18x_K_F3 120.15 97.325 9638.1 7518.8 13154 12667 13270 16739 11638 13081 17148 10462 21165 18588 17916 13412 15291 8292.8 18640 14792 8936.4 6924.9 13069 12413 13749 16519 12012 13547 17273 10975 21357 18328 18248 13746 15738 8806.1 17775 13994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5842800 6875 1289 6522 13069 10519 10519 1 9606 Homo sapiens 0.02178458215144019 ELQQAQTTRPESTQIQPQPGFCIK Unmodified 2784.3865 0.38647695 37 M0QYF4;M0QYA2;A0A024QZE9;Q9NWS0;M0R0J2;M0R3A8;M0QXD5;Q9NWS0-3 PIH1D1;FLJ20643 PIH1 domain-containing protein 1 yes no 0 0 1 8 0 1 50.525 50.601 4 6.7157E-13 13766 20230619_1888_Aki_TMTPro18x_K_F8 126.31 101.1 70082 61786 79862 73656 89501 89657 86162 92123 87863 104380 85701 79233 95197 78009 96381 106870 82585 104530 64909 56652 80409 73656 91998 89535 87161 94207 89479 104030 88435 81567 96876 82080 97294 106760 79302 99230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94981000 6876 37 6523 13070 10520;10521 10521 2 9606 Homo sapiens 0.06565917190209802 ELQQAVLHMEQR Unmodified 1480.7456 0.74564657 2110 Q53GX6;A8K7Q1;Q02818;B4DZX0;Q96BA4;B3KUR6 NUCB1 Nucleobindin-1 yes no 0 0 0 4.33 0.471 2 1 48.913 48.97 3 0.0022464 13332 20230619_1885_Aki_TMTPro18x_K_F5 74.853 51.627 35971 28316 31701 29445 34366 39112 37365 39249 44718 39385 36151 32153 36426 33723 39861 34987 45573 37053 33221 25942 32588 29796 35595 38826 37727 40065 44797 39591 37492 33029 37363 34803 40756 35274 43490 35202 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118440000 6877 2110 6524 13071;13072;13073 10522;10523 10523 2 9606 Homo sapiens 0.0245035769758033 ELQQQLVDAK Unmodified 1170.6245 0.62445203 4599 Q9NUQ3;Q9NUQ3-2 TXLNG Gamma-taxilin yes no 0 0 0 4 0 1 49.623 49.658 3 0.033432 13818 20230619_1883_Aki_TMTPro18x_K_F4 53.569 32.791 83793 71569 86713 91008 87098 94676 96133 91211 106590 108500 110260 106570 116840 95667 95448 126990 125740 118360 77525 65672 87876 90359 90661 95387 96739 93903 108180 108680 113200 107950 118030 100710 99277 126530 119960 112540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23446000 6878 4599 6525 13074 10524 10524 1 9606 Homo sapiens 0.04596478326561737 ELQSLLVEER Unmodified 1214.6507 0.65066678 3552 Q53YD8;P36404 hCG_23373;ARL2 ADP-ribosylation factor-like protein 2 yes no 0 0 0 3 0 1 55.678 55.719 2 7.3493E-11 16652 20230619_1882_Aki_TMTPro18x_K_F3 168.46 113.7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6879 3552 6526 13075 10525 10525 1 9606 Homo sapiens 0.05192747498040262 ELQSMADQEQVSPAAIK Unmodified 1843.8986 0.89857798 540 P32322-3;P32322;A0A024R8U9;E7D7X9;P32322-2;A0A1B2JLU7;E7D7Y0;E2QRB3;Q2TU78;Q8TBX0 PYCR1;PIG45 Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase yes no 0 0 0 4 0 1 54.317 54.333 3 0.00095444 15936 20230619_1883_Aki_TMTPro18x_K_F4 78.078 67.291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6880 540 6527 13076 10526 10526 1 9606 Homo sapiens 0.010384635128957598 ELQSQIQEAR Unmodified 1200.6099 0.6098646 1177 Q86TM7;Q6P184;Q3SX58;A0A140VJI4;B4DEH1;Q9P2X0;Q9P2X0-2 DPM3 Dolichol-phosphate mannosyltransferase subunit 3 yes no 0 0 0 3 0 1 40.064 40.121 2 1.292E-09 9635 20230619_1882_Aki_TMTPro18x_K_F3 207.86 146.97 148080 114810 118970 144460 172440 181550 174480 168970 222280 155350 173450 184210 182870 149220 160870 184580 190800 182450 136660 105380 124250 143890 175010 180480 177150 173130 221580 158740 180720 184530 185300 156950 165740 184740 182210 173350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174270000 6881 1177 6528 13077 10527 10527 1 9606 Homo sapiens 0.017584061784191363 ELQSVEQEVR Unmodified 1215.6095 0.60953025 2345 B3KM73;D3DVL7;B4DU42;Q969Z0-2;Q969Z0;C9J7P5;C9IZN7 TBRG4 Protein TBRG4 yes no 0 0 0 1.5 0.5 1 1 45.77 45.811 2 1.2119E-10 12641 20230619_1880_Aki_TMTPro18x_K_F1 232.63 177.87 201860 168020 178120 189290 192790 232070 216090 204150 258250 272060 286810 296090 313130 261190 261210 313130 338670 314030 186490 154010 183240 190010 199980 230790 217820 212310 261940 272070 294090 298300 316310 273340 271070 313740 323120 298350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 347190000 6882 2345 6529 13078;13079 10528;10529 10528 2 9606 Homo sapiens 0.010349864585805335 ELQSVKPQEAPK Unmodified 1352.73 0.72997974 4311 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 1 7 0 1 42.838 42.913 3 0.024591 10488 20230619_1887_Aki_TMTPro18x_K_F7 61.11 46.234 32624 26558 30629 31474 28962 34469 32126 28443 39254 39819 42042 41470 36207 34539 40200 40875 45264 38998 30150 24357 31262 31422 30334 34492 32430 29793 39696 39691 42753 41782 37359 36170 41089 40872 43216 37084 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38498000 6883 4311 6530 13080 10530 10530 1 9606 Homo sapiens 0.0677239445219584 ELQTLHNLR Unmodified 1122.6146 0.61455605 2727;1036 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;B4DS27;O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;Q57Z91;O60282-2;A0A7I2V352;A0A7I2YQQ7;Q59GB8 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5C Kinesin-1 heavy chain;Kinesin-like protein;Kinesin heavy chain isoform 5C no no 0 0 0 7 0.816 1 1 1 39.706 39.754 3 1.883E-12 9110 20230619_1887_Aki_TMTPro18x_K_F7 206.23 143.45 125130 88766 100030 121240 102390 117200 119870 115430 152130 113430 127660 120790 132710 108430 119310 127790 123590 111700 115410 81575 103870 119670 106780 118750 120810 118040 152030 115060 132300 121930 134620 113260 121840 127210 118120 106310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 616100000 6884 2727;1036 6531 13081;13082;13083 10531;10532 10532 2 9606 Homo sapiens 0.058153351118335195 ELQTSSAGLEEPPLPEDHQEEDDNLQR Unmodified 3075.3905 0.39049551 3138 J3KTF5;Q9BQ95;Q9BQ95-3;A0A8I5KR62 ECSIT Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial yes no 0 0 0 1 0 2 50.157 50.157 3;4 8.3215E-39 14395 20230619_1880_Aki_TMTPro18x_K_F1 204.31 190.99 17539 13193 13890 20967 16524 17748 19127 16779 21116 18072 24050 14683 23713 17196 18854 20778 20207 20477 16182 12143 14497 20471 17030 18162 19188 17259 21495 18105 24452 15191 23957 17864 19343 20799 19323 19451 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82042000 6885 3138 6532 13084;13085 10533;10534 10533 2 9606 Homo sapiens -0.0641841136362018 ELQVELSG Unmodified 873.44436 0.4443624 2878 E5RGX5;Q93045;B7Z4N6;B7Z5W7 STMN2 Stathmin;Stathmin-2 yes no 0 0 0 2 0 1 55.401 55.422 2 0.018802 16755 20230619_1881_Aki_TMTPro18x_K_F2 83.364 76.213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6886 2878 6533 13086 10535 10535 1 9606 Homo sapiens 0.0025779938958976345 ELQVLTK Unmodified 829.49092 0.49091866 4215 Q8IYS1 PM20D2 Peptidase M20 domain-containing protein 2 yes yes 0 0 0 7 0 1 50.732 50.809 3 0.050468 13952 20230619_1887_Aki_TMTPro18x_K_F7 62.546 3.9418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6887 4215 6534 13087 10536 10536 1 9606 Homo sapiens 0.06935284011512977 ELQYLQGHLVSSDLSPR Unmodified 1940.9956 0.99558991 4594 Q9NU22;Q6ZVV6 MDN1 Midasin yes no 0 0 0 7 0 1 54.971 55.035 3 8.1446E-07 15754 20230619_1887_Aki_TMTPro18x_K_F7 115.98 89.437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6888 4594 6535 13088 10537 10537 1 9606 Homo sapiens 0.06273193784159048 ELRDEEQTAESIK Unmodified 1546.7475 0.74748029 3892 Q4ZG57;Q14566 MCM6 DNA replication licensing factor MCM6 yes no 0 0 1 2 0.816 1 1 1 44.358 44.409 3 2.0834E-15 12056 20230619_1880_Aki_TMTPro18x_K_F1 198.74 161.89 1179200 908610 1040700 1102500 988740 1196900 1146500 1149000 1349700 1465000 1517600 1471700 1514700 1284200 1280200 1710100 1560800 1475800 1088900 833690 1068400 1098800 1036800 1201900 1153400 1185500 1370700 1463700 1548400 1487900 1535000 1353000 1323800 1697300 1490100 1404500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1148600000 6889 3892 6536 13089;13090;13091 10538;10539;10540 10538 3 9606 Homo sapiens -0.004023548034638225 ELREGTENER Unmodified 1231.5793 0.57929275 1826 E9PRZ7;E9PNJ4;A0A8V8TMG1;A0A8V8TP73;V5J3L2;A0A8V8TNW5;A0A8V8TMG5;H0YDB2;A0A8V8TNW0;G0XQ39;Q13586-2;Q13586;A0A8V8TMF0 STIM1 Stromal interaction molecule 1 yes no 0 0 1 1 0 1 27.894 27.894 3 0.0027295 5163 20230619_1880_Aki_TMTPro18x_K_F1 76.655 53.419 4762.6 3914.6 7764.2 5783.7 11363 8654 10363 13204 10431 5765.2 7982.9 11790 8054.2 7541.5 10180 5269.5 12922 8672 4426.9 3598.6 7677.1 5733.2 11449 8641.2 10513 12963 10510 6403.5 8341.8 11538 8329 7795.3 10436 5540.4 12308 8216.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4363600 6890 1826 6537 13092 10541 10541 1 9606 Homo sapiens -0.027233722066057453 ELRENTQTTIK Unmodified 1331.7045 0.70449327 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 1 6 0.816 1 1 1 37.798 37.875 3 7.4749E-09 8642 20230619_1886_Aki_TMTPro18x_K_F6 173.19 130.47 756060 785570 766540 592340 1142500 742770 801160 920510 818560 733730 824280 604780 780270 607640 725080 878750 1006300 623260 700370 717350 781610 617690 1143600 745990 828680 922280 833450 747440 842060 621440 795100 641010 754500 864010 957490 596080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2315200000 6891 1865 6538 13093;13094;13095 10542;10543 10543 2 9606 Homo sapiens 0.0519091992975973 ELRPQGSAR Unmodified 1012.5414 0.5413911 3215 O00488;A9J4F5 ZNF593 Zinc finger protein 593 yes no 0 0 1 6 0 1 27.079 27.113 3 0.054722 4780 20230619_1886_Aki_TMTPro18x_K_F6 51.949 30.442 7419.9 4453.5 6306.8 8320.5 10294 9218.4 9226.2 8608.3 10164 9626.8 9280.5 7904.4 8592.4 8838.8 7365.5 3516.6 8455.2 7457.8 6841.1 4112.7 6569.5 8086.8 10334 9239.1 9388.1 8864.4 10270 9626.4 9522.7 8122.2 8742.7 8807.7 7548.8 3855.9 8072.5 7045.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2175600 6892 3215 6539 13096 10544 10544 1 9606 Homo sapiens 0.03562206389244693 ELSAALQDKK Unmodified 1101.603 0.60298831 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;Q14980-5;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 7 0 1 47.297 47.385 3 0.00045756 12369 20230619_1887_Aki_TMTPro18x_K_F7 107.85 57.493 393390 323860 371580 378590 511180 435740 448710 454700 500070 411740 482910 398600 468390 379020 481040 426980 452040 344350 363600 296970 381250 378730 517300 437110 457640 461970 505630 418160 495170 405000 478900 394120 486990 423970 432040 328340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 350000000 6893 349;3906 6540 13097 10545 10545 1 9606 Homo sapiens 0.05625093297862804 ELSANTAAFAK Unmodified 1121.5717 0.57168818 2353 Q53GG3;B3KN57;B3KML1;O60749;O60749-2 SNX2 Sorting nexin-2 yes no 0 0 0 7 0 1 49.498 49.583 3 0.00022964 13412 20230619_1887_Aki_TMTPro18x_K_F7 108.7 89.426 124620 98644 115030 120890 131850 150070 133320 133390 153200 134420 138240 143700 146520 115030 151360 151380 154070 141530 115130 90509 117950 120640 135750 149140 134950 137440 154330 136100 142980 144500 149450 121550 153970 151000 147300 134570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151270000 6894 2353 6541 13098 10546 10546 1 9606 Homo sapiens 0.015765202637339826 ELSAQPEVHR Unmodified 1164.5887 0.58873523 1578 A0A5F9ZHN7;Q9NTJ5;E9PGZ4;B4DVV3;Q9NTJ5-2;F8WDN7 SACM1L Phosphatidylinositide phosphatase SAC1 yes no 0 0 0 2 0 1 33.502 33.56 3 1.7679E-07 7094 20230619_1881_Aki_TMTPro18x_K_F2 151.07 103.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6895 1578 6542 13099 10547 10547 1 9606 Homo sapiens 0.013024408695855527 ELSDDCFQQWGVRPR Unmodified 1891.8635 0.86352988 347 B7Z7Q6;E9PNF7;A0A024R5L0;P42785;P42785-2;E9PLY4;B3KR26;A0A7P0Z451 PRCP Lysosomal Pro-X carboxypeptidase yes no 0 0 1 6 0.816 1 1 1 51.441 51.518 3 5.8348E-25 14555 20230619_1886_Aki_TMTPro18x_K_F6 218.68 197.43 158060 140080 166330 187200 223260 225090 289300 288610 300600 209460 205210 176660 202730 168100 219910 199700 189130 210610 146290 128590 169340 185710 228880 226150 287990 288210 301480 215010 214830 180710 207780 175440 221510 200850 181400 199850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 279390000 6896 347 6543 13100;13101;13102 10548 10548 1 9606 Homo sapiens -0.04672734504447362 ELSDFISYLQR Unmodified 1369.6878 0.68778057 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;A0A8I5KNU9;A0A8I5KPY2;B4DDM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 7.5 0.5 1 1 63.996 64.022 2 5.9602E-17 19525 20230619_1888_Aki_TMTPro18x_K_F8 234.81 182.95 247390 218390 209060 236350 225380 287210 253160 263780 335750 278790 281680 284480 290890 267320 332580 323760 289250 349110 228570 200070 216030 237920 234100 285990 256160 271440 335060 281290 292080 288040 298690 279270 335040 325890 277590 331100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 921940000 6897 2389 6544 13103;13104 10549 10549 1 9606 Homo sapiens 0.01772419043800255 ELSDFLR Unmodified 878.44978 0.44978213 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;B5MCE7;Q75MG1;E9PFD4 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 0 5.5 0.5 1 1 56.165 56.233 2 0.0066578 16335 20230619_1885_Aki_TMTPro18x_K_F5 131.3 26.084 483450 415500 478910 468190 505070 596260 500620 571370 719060 567610 550570 493040 530120 441500 597360 552570 534580 550420 447140 380810 487210 470370 523160 592610 511900 584920 713110 571900 571650 502380 544830 463140 602550 553540 512200 522760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 389440000 6898 607 6545 13105;13106 10550;10551 10550 2 9606 Homo sapiens 0.005695229720458883 ELSDIAHR Unmodified 939.47739 0.47739386 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;H3BR04;H3BUH7;H3BMQ8 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 4.5 1.71 1 1 1 1 1 1 36.7 36.764 3 5.381E-11 8251 20230619_1882_Aki_TMTPro18x_K_F3 224.28 169.73 455900 323930 368480 430800 512940 534510 452160 477150 653490 574430 628180 640720 590620 522920 499240 599120 725460 626590 420540 297600 384070 427460 520100 531340 465590 493890 653160 577560 643930 643310 600040 547220 522250 602120 691240 595210 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3023199999.9999995 6899 3378 6546 13107;13108;13109;13110;13111;13112 10552;10553;10554;10555;10556 10553 5 9606 Homo sapiens 0.005234262322915129 ELSDIALR Unmodified 915.50255 0.50254598 26 A0A024QZ64;P09972;B7Z3K9;B7Z3K7;A8MVZ9;C9J8F3;J3KSV6;J3QKP5;J3QKK1;B7Z1H6 ALDOC Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C yes no 0 0 0 3.5 0.5 1 1 49.64 49.696 2 0.0027239 13858 20230619_1883_Aki_TMTPro18x_K_F4 122.18 17.412 288960 216570 266220 225630 195420 217350 281420 262370 284750 321050 386990 374220 363450 308820 361640 424440 404180 415570 266880 198460 271030 227310 210890 221570 279010 266550 293920 322780 391170 375510 371600 326770 370480 423960 386380 394760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 260350000 6900 26 6547 13113;13114 10557 10557 1 9606 Homo sapiens 0.041414810348555875 ELSDLAR Unmodified 802.41848 0.418482 761 P61077-3;P61077-2;P61077;A0A087WY85;A0A024RDH2;D6R933;D6R9F6;D6RA11;D6RIZ3;D6R980;D6RGD0;A0A024RDJ6 UBE2D3 Ubiquitin-conjugating enzyme E2 D3 yes no 0 0 0 3 0.816 1 1 1 43.081 43.144 2 0.0010518 11001 20230619_1882_Aki_TMTPro18x_K_F3 173.38 0 1066900 746430 843290 920460 1048200 1094500 1016600 957130 1397000 1268600 1316400 1114000 1251000 979780 1006400 1292400 1462600 1229500 983960 685260 878680 917450 1072500 1090600 1038200 995570 1398200 1261200 1349600 1134100 1267200 1032100 1054300 1289300 1393400 1169300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 955250000 6901 761 6548 13115;13116;13117 10558;10559 10559 2 9606 Homo sapiens 0.009369499379545232 ELSDLESAR Unmodified 1018.4931 0.49310351 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 1.5 0.5 1 1 44.94 44.981 2 3.4281E-06 12122 20230619_1881_Aki_TMTPro18x_K_F2 187.3 154.94 411000 339650 363880 405260 508860 528720 445010 450980 581970 510900 537940 540340 566400 446200 494150 577490 600920 589990 379710 311500 375940 405440 515460 523620 456550 467590 583360 514230 555170 544100 573620 470490 510100 578650 573850 560280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 415830000 6902 2980 6549 13118;13119 10560;10561 10561 2 9606 Homo sapiens -0.015403320413156507 ELSDSVTLSSSDR Unmodified 1394.6525 0.65251728 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2;B3KMK3 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 2 0 1 45.131 45.213 2 4.1011999999999994E-46 12214 20230619_1881_Aki_TMTPro18x_K_F2 313.3 272.95 96259 79557 80534 99364 107270 118000 102460 101700 138410 115650 114730 113030 123550 106820 98101 129960 127420 127080 88893 72998 83633 98922 109280 117530 104660 105390 138000 116130 119160 114680 124660 111610 102000 129980 121630 120730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 213910000 6903 81 6550 13120 10562 10562 1 9606 Homo sapiens -0.02902288274640341 ELSEALGQIFDSQR Unmodified 1591.7842 0.78420015 1081 A0A0S2Z3Y1;Q08380;B4DVE1;K7ESM3;K7EKQ5;K7EP36;K7EJY8 LGALS3BP Galectin-3-binding protein yes no 0 0 0 6 0 1 63.675 63.721 3 0.033703 19784 20230619_1886_Aki_TMTPro18x_K_F6 47.844 33.154 96488 69832 91040 104420 84113 111780 95674 94327 115040 117830 110550 110100 115510 112150 111900 117720 110520 98068 89113 64237 92930 102640 88418 111990 96415 98217 115970 117630 113860 112170 117650 115830 113800 117120 105670 93399 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57857000 6904 1081 6551 13121 10563 10563 1 9606 Homo sapiens 0.011979418130749764 ELSEALTR Unmodified 917.48181 0.48181054 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PHH9;A0A6Q8PGW4 GARS Glycine--tRNA ligase yes no 0 0 0 3.5 0.5 1 1 44.162 44.219 2 0.0017531 11466 20230619_1882_Aki_TMTPro18x_K_F3 137.62 46.758 574930 465620 480020 504910 503870 535240 525010 496930 690060 690000 819340 838370 767450 618890 744190 795240 852280 957360 530860 426690 495950 507270 522420 538370 533320 515660 698640 691480 832370 836860 783600 655290 763440 805150 815140 907200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 542240000 6905 3576 6552 13122;13123 10564 10564 1 9606 Homo sapiens 0.019768906551917098 ELSEQIQR Unmodified 1001.5142 0.5141733 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437 EZR;HEL-S-105 Ezrin yes no 0 0 0 2.5 0.5 1 1 38.454 38.513 2 0.001092 9124 20230619_1881_Aki_TMTPro18x_K_F2 155.75 19.641 493310 367460 435730 558110 722970 635720 591990 622450 806820 698630 724850 688640 760930 612030 583860 696300 859380 773870 455450 338040 452280 548570 723940 636850 610910 638680 806530 701940 748590 697000 767120 638670 612580 702380 818990 734520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 638970000 6906 3456 6553 13124;13125 10565;10566 10565 2 9606 Homo sapiens 0.013476780581981984 ELSESVQQQSTPVPLISPK Unmodified 2066.0895 0.089549874 862 Q9ULU4-19;Q9ULU4-18;H7C4X9;A0A087WYS3;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-12;Q9ULU4-14;Q9ULU4-21;Q9ULU4-8;Q9ULU4-23;Q9ULU4-15;Q9ULU4-17;Q9ULU4-6;Q9ULU4-3;Q9ULU4-2;Q9ULU4-4;Q9ULU4-22;A0A087WVZ6;Q5JV90;A0A087WV57;A6H8Y8 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 yes no 0 0 0 7 0 1 57.761 57.813 3 4.8511E-05 16906 20230619_1887_Aki_TMTPro18x_K_F7 89.344 72.945 17636 14382 19491 21587 14677 19868 23160 17448 18927 23934 22758 21878 22902 19496 22460 22579 24971 24283 16322 13224 19595 21174 15861 20151 22724 18190 19692 23771 23177 22217 23349 20358 22985 22736 23863 23048 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9354900 6907 862 6554 13126 10567 10567 1 9606 Homo sapiens 0.09914868095802376 ELSGLGSALK Unmodified 973.54441 0.5444108 2373 B3KPA6;B4DEA8;P49748-2;P49748;P49748-3;Q53HR2;B3KPX1;G3V1M7 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 8 0 1 53.922 53.994 2 1.2967E-07 15265 20230619_1888_Aki_TMTPro18x_K_F8 155.42 72.156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6908 2373 6555 13127 10568 10568 1 9606 Homo sapiens 0.05658036723389159 ELSGLPSGPSAGSGPPPPPPGPPPPPVSTSSGSDESASR Unmodified 3589.7172 0.71724938 2327 B2RDY9;D3DPU2;B4DNW7;B4DI38;B4DNY3;B4DNA3;B4DUZ8 CAP1 Adenylyl cyclase-associated protein yes no 0 0 0 5 0 1 55.066 55.133 4 2.031E-55 15858 20230619_1885_Aki_TMTPro18x_K_F5 222.71 218.05 9033.3 5095.3 5976.7 7684.1 6587.4 6623.2 8376.8 8471.3 9181.6 9531.6 9333.1 8989.4 9521 9775.9 9874.3 9954.1 8823.5 9959.7 8313.2 4693.1 6345 7530.9 6844.7 6819.2 8365.7 8554.9 9316.7 9559 9577.3 9178.3 9737.5 10061 9977.7 10002 8460.3 9455.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50114000 6909 2327 6556 13128 10569 10569 1 9606 Homo sapiens 0.025979447382724175 ELSGTIK Unmodified 746.41742 0.41741937 3530 P30050;Q59FI9;P30050-2;Q76P68 RPL12;cICK0721Q.2 60S ribosomal protein L12 yes no 0 0 0 5.5 1.12 1 1 1 1 43.91 43.984 2 0.0060876 11202 20230619_1885_Aki_TMTPro18x_K_F5 143.85 46.782 1116800 551990 1321500 1435300 1838100 1813500 1512800 1718100 1655300 1271400 1901400 1954600 1740100 1582100 1617600 782520 2001900 1781700 1031700 513310 1333600 1379900 1857400 1801400 1549500 1749400 1686300 1329900 1932500 1939000 1775900 1602600 1663300 858230 1910100 1682500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1671499999.9999998 6910 3530 6557 13129;13130;13131;13132 10570;10571;10572 10570 3 9606 Homo sapiens 0.03406735569046759 ELSIAIR Unmodified 800.4756 0.47560295 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7 1 1 1 48.55 48.622 2 0.02183 13266 20230619_1886_Aki_TMTPro18x_K_F6 102.72 1.8976 246450 199900 219260 246230 232770 253920 264980 256940 279490 274740 282160 278280 296390 244250 256560 302620 302380 299250 227660 183400 225370 244960 241590 256280 265760 262800 284060 276800 289960 281250 300140 256200 264370 302850 288850 284270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 164430000 6911 3758 6558 13133;13134 10573;10574 10573 2 9606 Homo sapiens 0.06738417214330639 ELSLAGNELGDEGAR Unmodified 1529.7322 0.73216458 1206 A0A140VJT8;P13489;A0A024RC87;H0YCR7 RNH1 Ribonuclease inhibitor yes no 0 0 0 1.5 0.5 1 1 51.185 51.207 2 4.2512000000000004E-33 14839 20230619_1880_Aki_TMTPro18x_K_F1 299.16 271.54 106620 82990 85157 98598 97835 120960 109980 108880 141030 135360 140890 132650 143700 113390 141770 160590 133720 159360 98396 76127 88587 98573 101150 120320 111120 112760 141900 135330 144630 134210 146400 120150 143870 160480 128200 151280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 716050000 6912 1206 6559 13135;13136 10575 10575 1 9606 Homo sapiens -0.011512216006394738 ELSLDDPEVEQVSGR Unmodified 1671.7952 0.79515877 2406 C9J5N1;B3KSP9;Q9BTE6;Q9BTE6-2;Q9BTE6-3;L7N2F4 PTGES3L-AARSD1;AARSD1 Alanyl-tRNA editing protein Aarsd1 yes no 0 0 0 1 0 1 53.031 53.031 2 1.162E-32 15603 20230619_1880_Aki_TMTPro18x_K_F1 247.29 210.96 25618 19990 25499 26500 24422 24793 25507 23368 31305 31382 27065 29191 32728 24384 34366 34172 31782 29353 23681 18358 25897 26203 25473 25175 25836 24198 31418 31222 28242 29562 33277 25839 34772 33916 30417 27940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58290000 6913 2406 6560 13137 10576 10576 1 9606 Homo sapiens -0.01386700603279678 ELSPDIAHLASLK Unmodified 1392.7613 0.76127986 4224 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 7.5 0.5 1 1 57.636 57.69 3 5.3946E-11 16853 20230619_1887_Aki_TMTPro18x_K_F7 179.5 124.52 145310 124710 137500 154580 136990 170980 161090 158440 185970 164490 153590 171350 161900 148090 160920 167860 155960 194620 134340 114410 140460 153850 143180 171310 161780 162920 186740 166170 159630 172770 165000 154570 163430 169850 149530 184420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 452010000 6914 4224 6561 13138;13139 10577 10577 1 9606 Homo sapiens 0.08060967486289883 ELSQDSTGR Unmodified 991.45705 0.45705235 3636 P52788;B4DE40;H7C2R7 SMS Spermine synthase yes no 0 0 0 1 0 1 31.583 31.583 2 0.0053041 6616 20230619_1880_Aki_TMTPro18x_K_F1 100.57 58.729 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6915 3636 6562 13140 10578 10578 1 9606 Homo sapiens -0.03901789218173235 ELSQNTDESGLNDEAIAK Unmodified 1932.8912 0.891244 3546 P35251-2;P35251;Q14756 RFC1;LLDBP Replication factor C subunit 1 yes no 0 0 0 1.5 0.5 1 1 50.042 50.068 3 9.7269E-19 14469 20230619_1881_Aki_TMTPro18x_K_F2 179.46 167.16 67080 55801 59959 68520 58211 77970 66697 66723 75887 82957 84410 73392 93775 76924 71895 91824 83008 82317 61979 51191 61543 68261 60966 77838 67061 69371 77174 82693 86514 75116 94348 80033 74216 91451 79309 78288 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 120540000 6916 3546 6563 13141;13142 10579;10580 10580 2 9606 Homo sapiens -0.03788597553807449 ELSSCANVLELTR Unmodified 1490.7399 0.73989249 4284 Q8WWH5;B4DZ90;B3KWQ1 TRUB1 Probable tRNA pseudouridine synthase 1 yes no 0 0 0 5.5 0.5 1 1 54.868 54.935 2 1.9758E-05 15819 20230619_1885_Aki_TMTPro18x_K_F5 136.38 102.51 24353 21867 30365 24774 24140 29964 29499 29867 32853 31214 29211 27897 37264 29911 34324 35110 34640 36023 22578 20040 30223 24870 25721 29899 29550 30544 33144 31382 30492 28554 37625 31079 34975 35249 33150 34200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13212000 6917 4284 6564 13143;13144 10581;10582 10581 2 9606 Homo sapiens 0.014152143952287588 ELSTTLNADEAVTR Unmodified 1518.7526 0.75256567 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;O14992 HSPA4;HEL-S-5a;HS24/p52 Heat shock 70 kDa protein 4 yes no 0 0 0 2.5 0.5 2 2 48.15 48.225 2;3 1.2547E-69 13324 20230619_1882_Aki_TMTPro18x_K_F3 347.75 316.25 195360 167610 200230 213150 217200 238010 240380 251800 293560 283450 271050 263850 324800 241000 250890 317570 319860 289500 180740 153800 203350 211860 224910 239100 242670 257040 295260 284180 281380 268070 326110 253550 260580 316130 305160 275380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1710299999.9999998 6918 3544 6565 13145;13146;13147;13148 10583;10584 10584 2 9606 Homo sapiens 0.013939490591155845 ELTAPDENIPAK Unmodified 1296.6561 0.65614609 2724 P11387;B9EG90;A0A7P0T852;Q9BVT2 TOP1 DNA topoisomerase 1 yes no 0 0 0 4 0 1 49.298 49.335 2 0.022068 13666 20230619_1883_Aki_TMTPro18x_K_F4 77.677 49.509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6919 2724 6566 13149 10585 10585 1 9606 Homo sapiens 0.019684262898636007 ELTAVVQK Unmodified 886.51238 0.51238239 3494 P23396;P23396-2;Q53G83;E9PL09;E9PPU1;H0YCJ7;A7E2S3;F2Z2S8;H0YF32;E9PK82;E9PJH4;E9PQ96 RPS3 40S ribosomal protein S3 yes no 0 0 0 7.25 0.829 1 1 2 48.555 48.63 2;3 0.00074273 13269 20230619_1886_Aki_TMTPro18x_K_F6 123.69 104.08 569170 405770 482360 481610 583080 622230 593220 534140 802980 546270 569710 512380 623300 485050 527690 593530 624690 529870 525210 372350 498720 482050 598370 616610 603610 552140 796130 551130 597330 521120 629790 507140 543940 591000 596110 504300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1980099999.9999998 6920 3494 6567 13150;13151;13152;13153 10586;10587;10588 10586 3 9606 Homo sapiens 0.06458669040250697 ELTDEEAER Unmodified 1090.4778 0.47784737 4703 Q9Y266;Q9H2R7;A0A0A0MSU9;A0A0A0MSS4 NUDC;NPD011 Nuclear migration protein nudC yes no 0 0 0 1 0 1 36.014 36.014 2 4.3398E-17 8348 20230619_1880_Aki_TMTPro18x_K_F1 246.37 112.69 150640 64815 151110 182150 189360 221850 168500 184670 215740 161160 228650 270510 246810 213550 193460 107290 264060 246420 138880 60431 154230 174510 193280 220180 172630 190640 217390 167570 234990 267350 248830 216670 201040 117640 251850 232640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 709560000 6921 4703 6568 13154 10589 10589 1 9606 Homo sapiens -0.06377243629185614 ELTELAR Unmodified 830.44978 0.44978213 284 B3KN05;A0A7P0TA76;B2RBE0;A0A024R487;O95573;A0A7P0TBB1;B3KMA6;A0A7P0T8L6;Q6PIM8 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes no 0 0 0 3 0 1 44.078 44.148 2 0.084335 11471 20230619_1882_Aki_TMTPro18x_K_F3 72.138 5.1036 94843 73251 90428 76986 81349 82755 85387 89785 102800 94936 103130 95447 102570 82059 86945 109770 130000 107140 87634 67121 91988 77606 85305 83461 86455 91353 103740 95685 105700 96483 103980 86577 91177 109650 123810 101870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85086000 6922 284 6569 13155 10590 10590 1 9606 Homo sapiens 0.027775229720418793 ELTGEDVLVR Unmodified 1129.5979 0.59790293 2051 A8K4T6;Q16401-2;Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes no 0 0 0 1.5 0.5 1 1 49.433 49.463 2 2.4066E-05 14186 20230619_1881_Aki_TMTPro18x_K_F2 158.37 108.95 136970 121290 128480 138400 147160 171810 167760 170920 201130 173560 167530 172390 175150 160190 162900 184340 176970 189450 126650 111170 131600 138830 152060 171170 168940 174690 201620 175290 173840 174640 178040 166890 166770 185090 169270 179840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326620000 6923 2051 6570 13156;13157 10591 10591 1 9606 Homo sapiens 0.038287894352379226 ELTHIYR Unmodified 930.49232 0.49231565 3486 P22059;B4DR25 OSBP Oxysterol-binding protein 1;Oxysterol-binding protein yes no 0 0 0 6.5 0.5 1 1 37.323 37.39 3 0.00094126 8489 20230619_1886_Aki_TMTPro18x_K_F6 148.07 26.776 76654 50041 72967 82720 79104 82535 79596 84146 105450 88090 98882 106670 103630 89121 89021 84458 116280 109970 70762 46111 74570 80800 81708 83479 81041 85969 105650 89409 102000 106790 104950 92289 92249 86401 110950 104200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134590000 6924 3486 6571 13158;13159 10592 10592 1 9606 Homo sapiens 0.024289181002814075 ELTHMEYDLEK Unmodified 1406.6388 0.63878147 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-9 DST Dystonin yes no 0 0 0 4.5 3.5 1 1 41.759 41.757 4 0.0080612 10035 20230619_1888_Aki_TMTPro18x_K_F8 70.942 43.532 140150 106420 125130 133020 138540 148850 141100 148170 165250 154330 160610 144730 170470 142290 159260 181220 164170 156430 129420 97678 128600 132370 142950 149310 142900 151550 166810 155380 165330 147410 173120 148900 162540 180050 156980 148870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 182990000 6925 1693 6572 13160;13161 10593;10594 10594 2 9606 Homo sapiens -0.0482723730744965 ELTHMEYDLEK Oxidation (M) 1422.6337 0.63369609 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-9 DST Dystonin yes no 0 1 0 7.5 0.5 1 1 37.304 37.33 4 0.051075 8128 20230619_1887_Aki_TMTPro18x_K_F7 55.401 43.608 64814 55176 56845 70574 104410 78232 76790 75738 77268 76289 83615 75189 84445 66473 78362 85595 69113 71436 59886 50634 59157 70084 103660 78569 79030 77563 78999 77032 85477 76143 85809 69871 79324 84905 66233 67992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117580000 6926 1693 6572 13162;13163 10595 10595 1104 1 9606 Homo sapiens -0.06071541170058481 ELTLLGK Unmodified 772.46945 0.46945494 2871 Q6LES8;E5KSX8;E5KSU5;Q00059;H7BYN3 TFAM Transcription factor A, mitochondrial yes no 0 0 0 7.5 0.5 1 1 55.903 55.963 2 0.022901 16134 20230619_1888_Aki_TMTPro18x_K_F8 107.32 34.278 76598 53682 65357 75492 63448 89545 64798 73034 115060 92706 92120 133100 139210 129330 69856 195640 193640 243800 70678 49352 67373 74584 66385 89033 66818 76281 113450 93966 97824 133220 137550 137050 79797 197770 184430 230870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97797000 6927 2871 6573 13164;13165 10596 10596 1 9606 Homo sapiens 0.0741189898282073 ELTMASLPFTFDVER Unmodified 1754.8549 0.85492225 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 0 0 7 0 1 64.453 64.483 3 6.2275E-08 19863 20230619_1887_Aki_TMTPro18x_K_F7 136.14 123.75 107200 86356 90227 103990 87272 117860 115300 99746 113910 130140 133300 108240 121390 92878 104980 131730 115170 130540 98986 79215 93147 103730 91818 117670 114570 104000 116940 129210 135150 110450 123410 98445 107760 131590 110200 123950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188600000 6928 2350 6574 13166 10597 10597 1 9606 Homo sapiens 0.007688988063819124 ELTNQQEASVER Unmodified 1402.6688 0.66883604 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;Q59F36;O95654;H8Y0Y3 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191;DCTN1/ALK fusion Dynactin subunit 1 yes no 0 0 0 1.5 0.5 1 1 36.843 36.872 2 3.3462999999999995E-40 8716 20230619_1880_Aki_TMTPro18x_K_F1 330.12 284.44 151050 105920 128300 155060 162040 177300 166000 160260 218940 180540 215700 206200 211550 188040 181580 174790 239640 218330 139370 97422 132900 152740 165880 177160 168720 165470 219750 182270 221160 207530 214720 193890 188310 178340 228580 206990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 153000000 6929 1717 6575 13167;13168 10598;10599 10598 2 9606 Homo sapiens -0.016391623179288217 ELTPQVVSAAR Unmodified 1169.6404 0.64043645 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9 VCL;HEL114 Vinculin yes no 0 0 0 6 0 1 44.781 44.87 2 1.9129E-08 11647 20230619_1886_Aki_TMTPro18x_K_F6 183.78 124.17 117460 105190 110240 122910 164170 186160 185830 178470 210220 164910 142550 155160 176130 131640 141920 191590 178430 174250 108620 96425 113530 123510 166890 183240 186700 182410 210050 167180 150990 157190 177020 139800 147210 190440 170340 165700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189320000 6930 51 6576 13169 10600 10600 1 9606 Homo sapiens 0.06240184563466755 ELTSLVK Unmodified 788.46437 0.46436956 1418 A0A384ME24;O00422;O00422-2;H7BZW6;U3KPY7 SAP18 Histone deacetylase complex subunit SAP18 yes no 0 0 0 7 0 1 51.852 51.926 3 0.0065849 14473 20230619_1887_Aki_TMTPro18x_K_F7 94.662 36.085 55862 44266 49502 61070 62171 64086 63083 63070 80756 70642 79764 80530 85903 67248 66524 92211 82778 76388 51595 40666 51073 60305 63606 64553 64086 64715 81203 71308 82130 80895 86531 71116 69025 91304 79000 72745 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42814000 6931 1418 6577 13170 10601 10601 1 9606 Homo sapiens 0.06167595120200531 ELTSTCSPIISK Unmodified 1334.6752 0.67516697 3544 P34932;B4DH02;V9HW33;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8;B0AZS1;B0AZT0;B4DN48 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 0 0 7.5 0.5 2 2 50.795 50.872 2;3 3.731E-31 13961 20230619_1887_Aki_TMTPro18x_K_F7 275.38 216.68 258190 216510 235200 270580 218860 266460 248350 285430 316250 344100 326400 390100 435610 372550 298440 521070 421780 473190 238610 198650 240820 268760 229780 270140 250950 291780 319050 345970 339460 393460 434750 392610 313950 517850 402720 449760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1518599999.9999998 6932 3544 6578 13171;13172;13173;13174 10602;10603 10602 2 9606 Homo sapiens 0.021216395892452056 ELTSTCSPIISKPK Unmodified 1559.8229 0.82289384 3544 P34932;B4DH02;V9HW33;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8;B0AZS1;B0AZT0;B4DN48 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 0 1 2 0 1 48.241 48.312 3 1.372E-11 13666 20230619_1881_Aki_TMTPro18x_K_F2 176.87 150.75 419520 392300 449240 432650 437130 397890 467160 435460 326400 556270 558750 362800 371690 233160 548990 214050 210930 109950 388490 359380 453490 433470 454620 406290 465310 445520 350530 549100 553210 372560 392490 244170 534610 210840 204380 105900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 464360000 6933 3544 6579 13175 10604;10605 10604 2 9606 Homo sapiens 0.06537531123217377 ELTVCSSSEEQR Unmodified 1423.6249 0.62492232 1392 A0A2X0U2G7;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 yes no 0 0 0 1 0 1 38.455 38.455 2 3.7752E-09 9410 20230619_1880_Aki_TMTPro18x_K_F1 202.56 173.47 17229 13267 14781 16340 23440 22007 14805 18057 21148 19733 22023 26762 25374 21374 18499 19969 28043 27750 15907 12174 15348 16319 23421 21744 15636 18756 21233 20071 22723 26641 25471 22160 19465 20522 26737 26276 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22287000 6934 1392 6580 13176 10606 10606 1 9606 Homo sapiens -0.06994514806547159 ELTVSNNDINEAGVR Unmodified 1629.7958 0.79582747 1206 A0A140VJT8;P13489;A0A024RC87;E9PIM9;E9PMJ3;E9PLZ3 RNH1 Ribonuclease inhibitor yes no 0 0 0 2.5 0.5 2 2 46.352 46.431 2;3 2.8958E-42 12786 20230619_1881_Aki_TMTPro18x_K_F2 343.87 287.14 134360 124870 144810 141220 149080 153770 143950 162510 177700 176630 184190 167860 201570 166050 180110 212570 206320 212450 124430 114420 146240 141520 154310 154810 146590 165720 179440 177490 189320 170890 204130 173850 185150 212750 197190 201770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1048099999.9999999 6935 1206 6581 13177;13178;13179;13180 10607;10608 10607 2 9606 Homo sapiens 0.006121388363908409 ELVAHLK Unmodified 808.48069 0.48068833 499 Q5T9B9;A8K2X4;A0A024R878;P17813-2;P17813;Q96CG0;F5GX88;B7Z6Y5;B4DTC8;Q53G87;B4DYI8 ENG Endoglin yes no 0 0 0 7.5 0.5 1 1 43.938 43.989 3 0.011112 10917 20230619_1887_Aki_TMTPro18x_K_F7 91.041 22.62 69877 45794 61529 63246 109070 145280 171650 161800 288220 86719 127180 176910 120670 122720 163600 106660 156640 204090 64469 42104 64061 63522 111620 140900 172660 162070 279740 94783 138170 173530 125630 127520 164910 113060 150270 192640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 293270000 6936 499 6582 13181;13182 10609 10609 1 9606 Homo sapiens 0.06878721076952843 ELVDDSVNNVR Unmodified 1258.6153 0.61534391 1398 B7Z972;A0A384MDK7;A0A3F2YNX8;P22061;P22061-2;F6S8N6;C9J0F2 PCMT1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 2 0 1 44.164 44.247 2 2.8944999999999998E-39 11777 20230619_1881_Aki_TMTPro18x_K_F2 294.11 262.74 140870 105750 120990 143350 146880 146420 146420 148010 182530 184700 201650 188570 198790 162130 169160 209090 200760 186970 130040 97151 125060 141670 150480 147890 148780 152080 184700 184810 205730 190440 201540 170590 174500 208020 191680 177870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 449530000 6937 1398 6583 13183 10610 10610 1 9606 Homo sapiens -0.003619150297708984 ELVEFAQDDDRLR Unmodified 1604.7794 0.77944912 1109 A0A0S2Z4Y4;A0A0S2Z5H3;Q14677;Q14677-3;Q14677-2 CLINT1 Clathrin interactor 1 yes no 0 0 1 1.5 0.5 1 1 51.01 51.033 3 4.7952E-16 14784 20230619_1880_Aki_TMTPro18x_K_F1 180.3 164.91 122380 94644 106400 122680 110940 132080 118900 116540 148740 158710 146240 146590 155170 130560 137360 152660 148260 155940 113000 86896 109590 121670 115260 132470 120350 121270 149850 157780 150540 148770 157230 136410 140680 153210 141800 148050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 501330000 6938 1109 6584 13184;13185 10611;10612 10611 2 9606 Homo sapiens 0.0012505767031143478 ELVEFAQDDDRLREER Unmodified 2018.9657 0.96574634 1109 A0A0S2Z4Y4;A0A0S2Z5H3;Q14677;Q14677-3;Q14677-2 CLINT1 Clathrin interactor 1 yes no 0 0 2 1 0 1 47.396 47.396 4 3.479E-11 13289 20230619_1880_Aki_TMTPro18x_K_F1 162.41 136.69 29218 30775 31335 27110 30265 32636 33896 35251 38581 40713 41570 37540 42368 37381 41608 43170 46088 42803 27081 28130 31614 27796 31609 32671 34125 35959 39173 40753 42523 38266 43192 38870 42577 43267 44030 40671 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111530000 6939 1109 6585 13186 10613 10613 1 9606 Homo sapiens -0.0029778995181004575 ELVEGEMK Unmodified 933.44773 0.44773322 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z5X3;B7Z2H3 SAFB Scaffold attachment factor B1 yes no 0 0 0 2 0 1 46.977 47.053 2 0.0023147 13092 20230619_1881_Aki_TMTPro18x_K_F2 128.69 82.968 157530 126420 143680 168980 161990 198080 174650 163290 269100 211120 224620 221170 224980 199740 192740 251340 259770 231820 145540 116090 147570 167450 167510 197220 178180 170540 266830 211320 232470 223410 228230 209400 200580 250490 247710 220490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120890000 6940 2020 6586 13187 10614 10614 1 9606 Homo sapiens -0.0216527382805225 ELVFKEDGQEYAQVIK Unmodified 1894.9676 0.96764382 3595 P47813;A6NJH9;O14602 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 0 0 1 4.5 0.5 1 1 57.19 57.222 3 0.0048466 16752 20230619_1885_Aki_TMTPro18x_K_F5 69.878 58.187 43567 51972 54145 50790 49657 47458 55676 54324 40699 56267 50612 33340 41891 27048 69115 27981 24690 18399 40481 47527 54027 51404 51958 48458 55363 55069 42779 56005 51033 34677 44200 28205 67121 27713 24009 17600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38653000 6941 3595 6587 13188;13189 10615 10615 1 9606 Homo sapiens 0.05595870804108927 ELVLDNCK Unmodified 989.48518 0.48518136 3990 Q53F35;Q92688-2;Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes no 0 0 0 5 0 1 48.393 48.469 3 0.0006118 13080 20230619_1885_Aki_TMTPro18x_K_F5 131.06 106.91 57082 53400 51224 55456 66956 73155 62772 59973 93384 69092 66291 57031 67990 61306 62574 71108 70965 70058 52785 48893 52784 56080 68258 72357 64438 62411 92270 69062 69290 58627 69125 63617 64235 71219 67811 66555 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41589000 6942 3990 6588 13190 10616 10616 1 9606 Homo sapiens -0.00998182562443617 ELVLDNSR Unmodified 944.49271 0.49270958 1493 A0A384P5U2;P39687;H0YN26;Q6PKH8;Q08AJ6;Q3KPI8;Q1AHP8;H7BZ09 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes no 0 0 0 2.5 0.5 1 1 43.084 43.158 2 0.009171 11248 20230619_1881_Aki_TMTPro18x_K_F2 102.51 85.274 282900 219900 267480 276780 344670 424200 371870 356440 540190 267150 297430 281130 295960 254180 292750 299620 323900 262050 261390 201830 274340 276710 353310 416010 378190 366350 530150 275860 316400 284070 302140 265390 299480 298290 309180 249520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3060599999.9999995 6943 1493 6589 13191;13192 10617 10617 1 9606 Homo sapiens 0.01824293029483215 ELVNNLGEIYQK Unmodified 1418.7405 0.74054442 2224 Q9H4M9;B2R5U3;A0A024R571;B4DMV9;B4DR44;B4DTR4;B4DZH9;C9J2Z4;C9JC03 EHD1 EH domain-containing protein 1 yes no 0 0 0 6.5 0.5 1 1 58.296 58.357 3 9.1226E-06 17145 20230619_1887_Aki_TMTPro18x_K_F7 136.27 115.42 101380 91753 101710 112390 100960 120970 116920 111850 132560 129530 124830 120270 127560 105960 135300 141940 124850 135780 93809 84145 103370 111910 105440 121450 117440 115380 133870 129690 128570 122070 130440 111690 136910 141690 119630 128990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99602000 6944 2224 6590 13193;13194 10618 10618 1 9606 Homo sapiens 0.047923771066280096 ELVPPDTLHSLPK Unmodified 1444.7926 0.79257999 106 A0A2X0SFA4;A0A024R0R1;M0QZR4;A0A8V8TMH9;Q92888-2;Q92888;Q92888-3;M0QZH8;Q49AN3;M0QYS3;M0QYC1;A0A8V8TP90;Q92888-4 ARHGEF1 Rho guanine nucleotide exchange factor 1 yes no 0 0 0 6.5 0.5 1 1 52.209 52.284 3 0.021083 14906 20230619_1886_Aki_TMTPro18x_K_F6 57.792 41.567 85676 75852 80698 92842 74192 93026 86287 85325 126890 102380 111570 93153 102260 86654 113320 116690 118590 106920 79225 69567 82377 92354 78079 93861 87549 88175 126250 102350 114670 94867 105200 91188 115340 116220 113340 101700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48896000 6945 106 6591 13195;13196 10619 10619 1 9606 Homo sapiens 0.08797540520390612 ELVPSSDPIVFVVGAFAHGK Unmodified 2068.0993 0.099326699 4312 Q92979;A8K6D2;V9GYP5;B4DQC7;A0A087WWQ2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes no 0 0 0 2 0 1 64.657 64.665 3 9.067400000000001E-30 20668 20230619_1881_Aki_TMTPro18x_K_F2 203.89 185.74 39616 30544 31886 42538 38302 39281 40569 34183 44806 41854 37482 35479 45676 39256 39974 50658 40520 49374 36560 28066 33192 41900 39335 39856 40880 35513 45134 41720 39150 36461 46092 40979 40842 50617 38825 46876 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44529000 6946 4312 6592 13197 10620 10620 1 9606 Homo sapiens 0.10800100891810871 ELVQQYHQFQCSR Unmodified 1721.7944 0.79438768 4623 Q9NXR7-4;Q9NXR7-3;Q9NXR7;Q9NXR7-1;C9J2G0;A0A075B7D2;F8W733;Q6ZWH1 BRE BRCA1-A complex subunit BRE yes no 0 0 0 8 0 1 43.996 44.015 3 6.4679E-11 11084 20230619_1888_Aki_TMTPro18x_K_F8 176.56 166.77 108100 82187 103410 123440 103850 110600 105290 106530 116030 120610 118160 119650 132340 114320 114850 136010 140760 138280 99877 75590 105540 121030 107860 112700 106460 109540 117760 121110 121760 121350 133820 119260 118640 136400 134410 131320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80573000 6947 4623 6593 13198 10621 10621 1 9606 Homo sapiens -0.03763773733317066 ELVSCSNCTDYQAR Unmodified 1701.7087 0.70866872 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 0 3.5 0.5 1 1 41.517 41.57 3 6.4329E-23 10259 20230619_1882_Aki_TMTPro18x_K_F3 239.87 227.85 83234 75518 77483 84921 116560 104420 107380 94520 125510 101420 111670 105180 117160 119460 107450 113190 125470 120790 76973 69199 79802 85254 117570 103970 109280 97456 126240 102350 115430 107130 119100 122350 110450 114280 119840 114670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 669840000 6948 3609 6594 13199;13200 10622;10623 10622 2 9606 Homo sapiens -0.11411726701135194 ELVSDTNQHVK Unmodified 1268.6361 0.63607935 2118 A8K8B0;P30154;P30154-2;P30154-3;B7Z1G3;P30154-5;H0YDG7 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 3.5 0.5 1 1 38.582 38.63 3 0.088745 9067 20230619_1882_Aki_TMTPro18x_K_F3 27.431 13.752 17725 19660 20947 18854 23329 26008 22649 22598 25430 22741 22699 23912 21556 20348 25078 18883 41189 25978 16451 17979 21035 19217 24020 25690 22965 23319 25640 23017 23387 24084 22243 21033 26284 19418 39149 24655 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95569000 6949 2118 6595 13201;13202 10624 10624 1 9606 Homo sapiens 0.012506753499110346 ELVTIIPNFSLDK Unmodified 1487.8235 0.82354577 4701 Q9Y248;Q53G08 GINS2 DNA replication complex GINS protein PSF2 yes no 0 0 0 1.5 0.5 1 1 64.054 64.058 3 6.0206E-05 20161 20230619_1880_Aki_TMTPro18x_K_F1 109.84 90.083 20771 16663 18840 18757 17724 24533 18385 20938 21155 23578 23357 19776 25623 21629 24265 31134 21701 26668 19189 15276 19285 18851 18565 24277 18601 21695 21500 23574 23938 20346 26009 22751 24598 30862 20822 25359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44509000 6950 4701 6596 13203;13204 10625 10625 1 9606 Homo sapiens 0.09914693834616628 ELVTVLLQHR Unmodified 1206.7085 0.70845643 556 A0A2R8Y544;B2RAA8;A0A024R949;Q9BR61 ACBD6 Acyl-CoA-binding domain-containing protein 6 yes no 0 0 0 2.5 0.5 1 1 56.263 56.3 3 6.878500000000001E-24 17094 20230619_1881_Aki_TMTPro18x_K_F2 188.87 139.78 30053 27910 30278 26422 23082 25018 24372 23983 25700 26818 27610 26601 26106 25178 23778 31677 28612 32002 27815 25535 30599 26820 24575 25406 24567 24657 26192 26944 28165 26980 26605 26351 24533 31722 27352 30380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12335000 6951 556 6597 13205;13206 10626;10627 10626 2 9606 Homo sapiens 0.11337054214141062 ELVVTQLGYDTR Unmodified 1392.7249 0.72489436 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;V9GY25 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 5.5 0.5 1 1 54.729 54.801 2 1.2895E-23 15767 20230619_1885_Aki_TMTPro18x_K_F5 249.83 205.11 138660 122350 126650 149880 140940 159240 164600 154380 187140 190710 183400 187540 193100 161080 191430 222070 201980 222760 128180 112210 130040 149210 145960 160210 165240 159050 189300 190690 188830 189660 196690 170290 195460 222110 193290 211500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155810000 6952 1831 6598 13207;13208 10628;10629 10628 2 9606 Homo sapiens 0.044240905895549076 ELVYPPDYNPEGK Unmodified 1519.7195 0.71947463 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B4DE32;B4E356;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 0 0 0 3.5 0.957 1 2 2 1 54.36 54.4 2;3 0.0024263 16095 20230619_1882_Aki_TMTPro18x_K_F3 89.548 53.589 218220 186000 218010 248200 198210 196600 222840 213660 238510 339020 329440 323630 394920 315750 285530 414750 346600 394150 201830 170770 221320 244840 207920 203200 223880 220550 246220 335270 336440 329080 395630 331300 296380 413630 331360 374410 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1037499999.9999999 6953 150 6599 13209;13210;13211;13212;13213;13214 10630;10631;10632;10633 10631 4 9606 Homo sapiens -0.019596329929299827 ELWLVIHGR Unmodified 1121.6346 0.63456321 1752 A0A8I5KX20;A0A8I5QJ67;A0A8I5KSY3;D6RFH4;A0A8I5KP74;H3BUX2;A0A8I5QKN7;A0A8I5KYK4;J3QR91;A0A8I5KSY8;O43169;Q5HYD9 CYB5B;DKFZp686M0619 Cytochrome b5 type B yes no 0 0 0 4 2 1 1 54.477 54.501 3 5.8056E-05 16367 20230619_1881_Aki_TMTPro18x_K_F2 144.09 102.69 24534 20052 22063 23441 15743 21446 23346 20078 29590 25613 20510 26482 30072 26527 27457 28734 20722 27521 22667 18388 22537 23373 17103 21803 23282 20773 29434 25633 21936 26823 30264 27472 27604 28773 19939 26128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156420000 6954 1752 6600 13215;13216 10634;10635 10634 2 9606 Homo sapiens 0.07861130842479724 ELYEYCIK Unmodified 1116.5161 0.51614714 3574 P41223;P41223-2 BUD31 Protein BUD31 homolog yes no 0 0 0 5 0 1 53.594 53.664 3 0.0022225 15340 20230619_1885_Aki_TMTPro18x_K_F5 106.36 68.675 45198 34658 41527 45583 41880 48411 44757 43569 53722 53226 45152 45239 56987 41979 46590 62844 54264 55093 41749 31827 42520 45163 43589 48620 45238 45107 53921 53042 47243 46198 57260 44542 48072 62329 51851 52407 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130570000 6955 3574 6601 13217 10636 10636 1 9606 Homo sapiens -0.03745029248239007 ELYGVGVEK Unmodified 992.51786 0.51786169 770 Q5U0C2;Q53HK8;A0A024RDQ8;P40938;B4DKE6;P40938-2 RFC3 Replication factor C subunit 3 yes no 0 0 0 6.5 1.12 1 1 1 1 50.776 50.853 2 0.00077421 14054 20230619_1885_Aki_TMTPro18x_K_F5 123.86 60.374 102430 84192 96428 98394 102680 104420 104220 101910 109960 118790 134210 130070 142310 117590 118510 136980 142630 125120 94671 77202 98543 98309 106140 105130 105220 104750 112710 119480 136870 131150 143840 122720 122350 136640 136110 119030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2021799999.9999998 6956 770 6602 13218;13219;13220;13221 10637 10637 1 9606 Homo sapiens 0.02130347832053303 ELYPVEFR Unmodified 1051.5338 0.53384611 2456 J3KT68;B4DDT6;Q5BJF2 TMEM97 Transmembrane protein 97 yes no 0 0 0 4 0.816 1 1 1 53.919 53.965 2 0.0036592 15770 20230619_1883_Aki_TMTPro18x_K_F4 118.74 88.173 316220 277400 290110 324570 299520 355670 311570 320230 388480 351060 356450 334920 367740 327540 350180 427000 388070 406960 292330 254310 297240 324310 311080 356470 315880 330420 390100 352810 367590 340750 374290 343310 358930 426140 371070 386680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 249850000 6957 2456 6603 13222;13223;13224 10638;10639 10638 2 9606 Homo sapiens 0.010140540689462796 ELYVPENK Unmodified 990.50221 0.50221163 3250 O43252;Q05BW9 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 4.5 0.5 1 1 48.091 48.149 2 0.0056633 13096 20230619_1883_Aki_TMTPro18x_K_F4 112.84 27.778 140300 106360 105800 112210 167170 181670 140000 134790 194800 193550 207870 192990 209860 172890 166680 249010 235190 215290 129410 97470 111300 113750 168230 177410 144370 142440 195930 192530 212570 195420 212110 183010 174480 246860 224230 204910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190500000 6958 3250 6604 13225;13226 10640 10640 1 9606 Homo sapiens 0.00658061315004943 EMAAMCLGLAHSLSR Unmodified 1645.7739 0.77385193 4712 Q9Y2X3;B3KN82;H7BZ72 NOP58 Nucleolar protein 58 yes no 0 0 0 2 0 1 54.039 54.067 3 3.1743999999999996E-19 16200 20230619_1881_Aki_TMTPro18x_K_F2 212.35 194.98 40047 30551 38178 37102 32510 40941 45370 39625 47705 42269 41105 40773 46499 36915 43760 46780 42580 48019 37000 28033 38859 36992 34598 41067 45059 40657 48191 42545 42728 41340 47138 38746 44500 46911 40789 45576 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85220000 6959 4712 6605 13227 10641 10641 1 9606 Homo sapiens -0.023204037090181373 EMACPYSVLISGDIK Oxidation (M) 1697.8004 0.80044384 3982 Q52LJ0;Q52LJ0-1 FAM98B Protein FAM98B yes no 0 1 0 6.5 0.5 1 1 60.572 60.623 3 4.2692E-05 18364 20230619_1886_Aki_TMTPro18x_K_F6 96.414 85.626 42862 39368 53342 48031 50739 51635 46468 53874 55098 61130 62478 67025 73432 58867 54888 71165 71971 80343 39744 36100 53230 47866 52743 52008 47426 55054 55993 61550 64245 67494 73702 61674 57174 71777 68754 76182 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106560000 6960 3982 6606 13228;13229 10642;10643 10642 2632 2 9606 Homo sapiens -0.02054436336698018 EMAEAFAGEIPK Unmodified 1291.6118 0.61183843 1042 O94973-2;O94973;B7Z5S9;A0A0G2JS82;O94973-3;A0A8I5KPP9;A0A0G2JQM1;B3KMI7;A0A0G2JRF9;A0A0G2JQA4;E9PPY8;E9PQP4;A0A0G2JQT9;A0A0G2JS17;Q59FN8;A0A0G2JQF7;Q8N2F8 AP2A2 AP-2 complex subunit alpha-2 yes no 0 0 0 5 0 1 58.684 58.741 3 0.00018569 17400 20230619_1885_Aki_TMTPro18x_K_F5 81.92 59.722 36760 27504 37031 39621 34146 34480 37488 33551 46409 35031 29826 36792 44606 32707 36182 40522 36247 42582 33975 25285 37561 38939 35771 35238 37871 34411 46109 35405 32076 37114 44626 34315 36968 40697 34724 40399 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27079000 6961 1042 6607 13230 10644 10644 1 9606 Homo sapiens -0.02230301127997336 EMAEDDDDSFP Oxidation (M) 1285.4292 0.4292422 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O95325 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 1 0 1 0 2 50.631 50.631 2 0.0015814 14269 20230619_1880_Aki_TMTPro18x_K_F1 94.874 94.874 35921 26693 35474 39709 39812 44907 49084 43586 47969 43131 46557 41628 50723 41099 44693 53087 48396 50424 33192 24550 36175 39082 41248 44965 48896 44619 48860 43582 47988 42357 51338 43056 45804 52980 46283 47914 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 50111000 6962 2361 6608 13231;13232 10645;10646 10645 1463 2 9606 Homo sapiens -0.20205525051278528 EMAEDDDDSFP Unmodified 1269.4343 0.43432758 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O95325 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 1 0 1 55.148 55.148 2 0.0091948 16481 20230619_1880_Aki_TMTPro18x_K_F1 82.241 80.869 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6963 2361 6608 13233 10647 10647 1 9606 Homo sapiens -0.18961221188669697 EMAIPVLEAR Unmodified 1127.6009 0.60087982 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 4.5 0.5 1 1 56.427 56.462 2 0.0089712 16430 20230619_1885_Aki_TMTPro18x_K_F5 81.099 53.003 94128 81452 93299 92022 84838 103940 99245 101950 123680 115690 111000 103970 112080 88942 115390 127990 109770 127010 87063 74651 94724 92261 89294 104150 100010 104630 124110 115840 114510 105620 114470 94354 117050 127890 105200 120590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110430000 6964 3654 6609 13234;13235 10648 10648 1 9606 Homo sapiens 0.04218341288378724 EMANLRPEGR Oxidation (M) 1187.5717 0.57170495 2723 B9A6J2;Q15042;Q15042-3;D3DP75;A0A8J9AUI2;Q15042-4;A0A8I5KRH8 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes no 0 1 1 4 0 1 29.326 29.395 3 0.089364 5370 20230619_1883_Aki_TMTPro18x_K_F4 45.908 32.229 23101 15876 21317 23796 28243 29165 23450 25312 31397 29187 31837 31304 31717 28346 31978 30138 37557 30736 21326 14608 21917 23436 28663 28992 24174 26222 31556 29365 32637 31582 32402 29425 32806 30302 35833 29211 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40858000 6965 2723 6610 13236 10649 10649 1631 1 9606 Homo sapiens -0.014578030079064774 EMDEAATAEER Oxidation (M) 1266.5034 0.5034102 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 1 0 1 0 1 30.715 30.715 2 3.0554E-06 6252 20230619_1880_Aki_TMTPro18x_K_F1 160.97 148.68 56551 32287 53923 63358 72116 65567 64582 68960 85275 63377 76422 67686 74395 64318 68250 57424 82276 77523 52172 29846 55307 61402 73194 66193 66191 70060 85275 64525 78668 68422 75721 66124 70217 58984 78553 73436 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82240000 6966 1676;2901 6611 13237 10650 10650 1092 1 9606 Homo sapiens -0.11918137169095644 EMDEAATAEER Unmodified 1250.5085 0.50849557 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 1 0 1 36.754 36.754 2 7.5526E-17 8674 20230619_1880_Aki_TMTPro18x_K_F1 232.63 204.89 188470 123050 161890 168490 177880 207310 180980 187260 251130 236450 215650 209500 265600 200010 188370 196190 266840 234720 173850 113130 166950 166890 183870 206160 184460 193920 250560 235600 224960 213450 265720 206660 197240 199370 254330 222650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218430000 6967 1676;2901 6611 13238 10651 10651 1 9606 Homo sapiens -0.10673833306486813 EMDEQIR Oxidation (M) 935.40185 0.40184566 1095 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;A0A494C0P6;Q6LDX7 TPM3;DKFZp686J1372;TPM3-ROS1 Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor yes no 0 1 0 1 0 1 30.441 30.441 2 0.015955 6136 20230619_1880_Aki_TMTPro18x_K_F1 103.91 76.945 56247 29560 50724 63500 84887 82046 74341 80365 101520 67149 83672 82127 84351 72857 70311 48108 92411 75293 51851 27379 52571 61500 85153 81474 76372 81835 101060 69095 86682 82332 85429 74182 72825 50356 88086 71288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206900000 6968 1095 6612 13239 10652 10652 670 1 9606 Homo sapiens -0.06843919010293575 EMDEQIR Unmodified 919.40693 0.40693104 1095 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;A0A494C0P6;Q6LDX7 TPM3;DKFZp686J1372;TPM3-ROS1 Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor yes no 0 0 0 1 0 1 36.485 36.485 2 0.00093416 8555 20230619_1880_Aki_TMTPro18x_K_F1 175.75 138.73 171960 91807 147520 169770 199550 231960 187610 203760 290490 211590 228560 228750 242950 213940 186460 144350 263160 234940 158480 84822 152830 165680 203190 229010 192960 210220 287420 214170 237940 230730 244950 217620 194560 151430 250850 222290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 246610000 6969 1095 6612 13240 10653 10653 1 9606 Homo sapiens -0.055996151476847444 EMDPEYEEK Oxidation (M) 1184.4543 0.45433474 940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370;D7EZH4 SMARCA1 Probable global transcription activator SNF2L1 yes no 0 1 0 1 0 1 39.356 39.356 3 0.046053 9820 20230619_1880_Aki_TMTPro18x_K_F1 45.022 23.336 33988 25096 36264 39694 47189 50975 48304 43704 52749 42170 50437 59664 50154 44841 46400 37648 59741 51894 31426 23100 36840 39005 48163 50503 48756 45129 53356 43251 51910 59212 51046 46360 47929 38784 56977 49167 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20012000 6970 940 6613 13241 10654 10654 530 1 9606 Homo sapiens -0.1305142545804756 EMDPFHYDYQTLR Unmodified 1713.7457 0.74570615 248 A0A024R3J8;Q9H0Q3;J3QKN1;E9PJ02;E9PHZ3;A0A0A6YYL5;A0A087WZ82;Q9H0Q3-2 FXYD6;FXYD6-FXYD2 FXYD domain-containing ion transport regulator 6 yes no 0 0 0 4 0 1 54.166 54.182 3 0.0010319 15882 20230619_1883_Aki_TMTPro18x_K_F4 93.823 82.131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6971 248 6614 13242 10655 10655 1 9606 Homo sapiens -0.08261687093067849 EMDPVTQLYTMTSTLEYK Unmodified 2148.9959 0.99590876 3867 Q13740-2;F5GXJ9;Q13740;B3KNN9;B4DX43;H7C543 ALCAM CD166 antigen yes no 0 0 0 7 0.816 1 1 1 65.253 65.283 3 5.0412E-14 20056 20230619_1888_Aki_TMTPro18x_K_F8 161.19 140.25 36121 29262 36934 34222 50411 58317 60668 59530 58927 62679 40626 39836 70072 43191 40790 77376 52075 47409 33404 26834 37661 34487 51564 57155 60480 60756 59502 62475 43809 41642 69097 46301 42817 75414 49683 45364 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 319050000 6972 3867 6615 13243;13244;13245 10656 10656 1 9606 Homo sapiens -0.03262935393149746 EMDRETLIDVAR Oxidation (M) 1462.7086 0.70859237 765 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 1 1 2 0.816 1 1 1 41.518 41.565 3 0.03859 10540 20230619_1881_Aki_TMTPro18x_K_F2 57.885 25.822 795150 517130 712790 713090 829340 814990 660220 735250 932380 840420 905310 888700 909730 875800 928590 731290 1098300 1013500 733690 475470 732350 705270 847680 814710 684350 759250 933410 845620 930270 899150 930110 896240 952080 753750 1048600 959930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 985860000 6973 765 6616 13246;13247;13248 10657 10657 465 1 9606 Homo sapiens -0.004253586388358599 EMDRETLIDVAR Unmodified 1446.7137 0.71367774 765 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 0 1 3 0.816 1 1 1 46.077 46.144 3 3.5271E-07 12357 20230619_1882_Aki_TMTPro18x_K_F3 151.78 109.57 1238100 944350 1065700 1239600 952500 1240800 1196300 1171700 1386800 1418500 1323600 1291000 1422200 1115000 1398200 1586500 1376900 1529200 1143000 867210 1096500 1227200 1007000 1252500 1198100 1208600 1400100 1416500 1365300 1310800 1446600 1181400 1422200 1582800 1318700 1452500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1186600000 6974 765 6616 13249;13250;13251 10658;10659 10659 2 9606 Homo sapiens 0.00818945223772971 EMDYETEVEMEK Oxidation (M) 1547.6007 0.60074098 1809 A0A8V8NBT1;Q12769;G3V198;E9PR16;Q12769-3 NUP160 Nuclear pore complex protein Nup160 yes no 0 1 0 1 0 1 50.166 50.166 3 0.021912 14413 20230619_1880_Aki_TMTPro18x_K_F1 53.448 40.247 21776 16926 18964 21430 19870 23894 22193 21836 25556 23115 26958 24611 26098 19771 25367 28036 24206 23507 20108 15537 19530 21300 20656 23922 22348 22487 25887 23342 27540 24774 26607 20993 25759 27781 23167 22378 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17903000 6975 1809 6617 13252 10660 10660 1164 1 9606 Homo sapiens -0.15115536075131786 EMDYETEVEMEK Unmodified 1531.6058 0.60582636 1809 A0A8V8NBT1;Q12769;G3V198;E9PR16;Q12769-3 NUP160 Nuclear pore complex protein Nup160 yes no 0 0 0 1 0 1 53.299 53.299 3 0.014061 15731 20230619_1880_Aki_TMTPro18x_K_F1 64.121 53.177 23668 23088 23492 22048 24943 23768 26527 28317 30067 18310 18692 15491 18402 16772 18875 18424 21799 19563 21910 21122 23887 22404 25808 24030 26765 28337 29941 18972 19685 15921 18830 17347 19343 18554 20814 18577 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24367000 6976 1809 6617 13253 10661 10661 1 9606 Homo sapiens -0.13871232212500217 EMEADERDR Unmodified 1149.4721 0.47205049 3611 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 1 1 0 1 27.928 27.928 3 9.6396E-09 5194 20230619_1880_Aki_TMTPro18x_K_F1 204.86 172.54 21441 11168 31129 32178 42618 48731 29710 42581 34559 19420 39008 43612 28292 31227 39725 11689 47391 36001 19855 10406 30992 30937 43008 47819 30904 43272 35033 21614 39395 42722 29813 31571 40452 13520 45190 33978 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19488000 6977 3611 6618 13254 10662 10662 1 9606 Homo sapiens -0.09670665412500057 EMEAELEDERK Oxidation (M) 1393.6031 0.60312424 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 1 1 1 0 1 37.312 37.312 3 0.039553 8896 20230619_1880_Aki_TMTPro18x_K_F1 79.036 68.13 125220 95226 117900 126580 152110 166210 165390 164950 203590 187380 205390 205750 202680 173560 173160 203260 223400 208540 115680 87460 120970 125760 155690 165010 167120 169140 205260 188760 210490 206960 205600 181660 179530 204000 213160 198070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116440000 6978 148 6619 13255 10663 10663 70 1 9606 Homo sapiens -0.07793319555139533 EMEAELEDERK Unmodified 1377.6082 0.60820962 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 1 1 0 1 43.552 43.552 3 0.00019772 11673 20230619_1880_Aki_TMTPro18x_K_F1 113.77 78.03 298760 242070 253540 277310 303130 341690 351880 354490 439930 421010 410580 438260 491460 363990 389720 541510 541680 483890 275890 221940 262270 278080 312530 340950 354560 362910 442120 422450 426260 441740 494020 387450 407280 537600 516410 460420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 418350000 6979 148 6619 13256 10664 10664 1 9606 Homo sapiens -0.06549015692507965 EMEAPGGPSEDR Oxidation (M) 1289.5194 0.51939461 4485 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 1 0 1 0 1 30.661 30.661 2 0.0047208 6270 20230619_1880_Aki_TMTPro18x_K_F1 80.24 71.377 12853 8484.7 10680 13639 17615 16724 12371 13446 18342 11220 13231 14358 14451 13792 11375 15876 17505 16381 11854 7815.2 11146 13376 17605 16602 12958 13904 18128 11574 13871 14422 14584 14347 11983 15936 16681 15558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10353000 6980 4485 6620 13257 10665 10665 2787 1 9606 Homo sapiens -0.11378430932177253 EMEAPGGPSEDR Unmodified 1273.5245 0.52447999 4485 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 0 0 1 0 1 36.629 36.629 2 0.0005229 8641 20230619_1880_Aki_TMTPro18x_K_F1 104.82 89.558 12928 7784.1 11572 13007 14688 15469 13394 14253 17155 13739 16591 15001 16905 14828 15685 15336 19055 16945 11924 7176.7 11922 12729 14979 15421 13698 14628 17230 13961 17051 15175 17192 15329 16154 15497 18184 16086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9939100 6981 4485 6620 13258 10666 10666 1 9606 Homo sapiens -0.10134127069545684 EMEENFAVEAANYQDTIGR Oxidation (M) 2201.9535 0.95352668 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 1 0 2 0.816 3 3 3 56.474 56.492 2;3 5.5673E-40 16966 20230619_1881_Aki_TMTPro18x_K_F2 261.76 247.29 220270 152690 228670 222680 347410 339180 294650 262940 328610 323810 322140 286650 311300 277280 300850 319330 317270 376820 203550 140440 233300 220540 349680 332430 301080 275460 332760 323000 330130 292460 317650 288670 307150 323360 303810 357080 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3374599999.9999995 6982 3414 6621 13259;13260;13261;13262;13263;13264;13265;13266;13267 10667;10668;10669;10670;10671 10668 2027 5 9606 Homo sapiens -0.09937194477106459 EMEENFAVEAANYQDTIGR Unmodified 2185.9586 0.95861206 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 0 0 2 1.1 2 2 1 60.348 60.353 2;3 1.5019E-100 18733 20230619_1881_Aki_TMTPro18x_K_F2 367.69 324.94 158310 145110 179990 135780 211490 237600 224960 213480 203950 235560 232710 235730 252760 213200 240290 260250 268890 266160 146660 132760 181290 139420 217400 232050 225400 220220 210320 236830 238370 238560 256740 223190 246240 261050 256980 252750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3055099999.9999995 6983 3414 6621 13268;13269;13270;13271;13272 10672;10673;10674 10673 3 9606 Homo sapiens -0.08692890614520365 EMEEPFEK Unmodified 1037.4376 0.43756246 914 P30566;A0A7P0T9A7;A0A7P0Z472;A0A096LNY6;X5D8S6;A0A1B0GTJ7;A0A1B0GWJ0;B4DP46;A0A0A6YY92;A0A7P0T8E4;A0A1B0GTG9;A0A1B0GWF8;X5D2Z4;X5DP48;P30566-2;A8K4X6;B4DUM2;A0A096LPA2 ADSL Adenylosuccinate lyase yes no 0 0 0 1.5 0.5 1 1 49.531 49.56 2 0.0028762 14259 20230619_1881_Aki_TMTPro18x_K_F2 121.05 19.06 64716 47086 48183 65176 52860 62064 65692 65875 73871 65888 72798 71132 75653 61949 64635 81936 85908 79993 59674 43274 50506 64261 54956 63058 65732 67051 74715 66753 74847 71708 76607 65268 67186 81854 81950 76020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85252000 6984 914 6622 13273;13274 10675 10675 1 9606 Homo sapiens -0.07965881553309373 EMEEQMR Oxidation (M) 967.37392 0.37391635 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;P23246-2;H0Y9K7;H0Y9U2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 1 0 1 0 1 28.95 28.95 2 0.068021 5564 20230619_1880_Aki_TMTPro18x_K_F1 71.501 68.664 31770 16494 34059 36662 45767 49530 40583 42065 55453 35810 43689 41697 44142 36765 38745 26313 52195 47888 29327 15288 34600 35489 46485 48896 41669 43313 55117 36752 45376 41878 44792 37574 40160 27861 49780 45272 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35629000 6985 1450 6623 13275 10676 10676 944 1 9606 Homo sapiens -0.11107565262034313 EMEEQMR Unmodified 951.379 0.37900173 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;P23246-2;H0Y9K7;H0Y9U2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 1 0 1 34.985 34.985 2 0.020935 7961 20230619_1880_Aki_TMTPro18x_K_F1 103.92 94.678 75401 42655 78527 73929 89907 118790 89919 92620 122970 88175 102360 90281 112010 93576 86007 62951 128970 117640 69610 39359 79682 72619 92692 116000 91673 96260 122470 89535 106290 91644 112810 94914 90139 66893 122910 111190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89765000 6986 1450 6623 13276 10677 10677 1 9606 Homo sapiens -0.09863261399425483 EMELFFPSSGGCGPANTAK Unmodified 1998.8815 0.88154771 551 E9PNU1;Q59GR0;B4DXC8;A0A024R8Z7;Q9Y5B8-2;Q9Y5B8 NME7 Nucleoside diphosphate kinase 7 yes no 0 0 0 7 0 1 61.578 61.617 3 4.0602E-07 18503 20230619_1887_Aki_TMTPro18x_K_F7 100.27 87.137 118970 153550 130800 107770 126570 100140 118250 120730 94306 116970 118320 83525 110120 85638 138030 105390 100760 72277 110500 140080 131610 112800 131160 102630 119100 121790 98520 117310 119770 86513 113860 89330 137620 103860 96570 69104 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47823000 6987 551 6624 13277 10678 10678 1 9606 Homo sapiens -0.07793780364568192 EMEPLGWIHTQPNESPQLSPQDVTTHAK Oxidation (M) 3185.5088 0.50877693 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q53GM6 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 1 0 5 0 1 52.655 52.727 4 3.4258E-05 14943 20230619_1885_Aki_TMTPro18x_K_F5 73.109 67.268 13112 10978 12973 15020 17978 17372 15509 18517 16402 16452 17901 15480 19033 16667 16349 17435 18378 20091 12125 10082 13274 14864 18191 17416 15818 18770 16727 16706 18328 15813 19265 17200 16790 17654 17577 19048 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29034000 6988 1863 6625 13278 10679 10679 1192 1 9606 Homo sapiens 0.003442894111685746 EMEQLFSQYGR Oxidation (M) 1402.6187 0.61871473 3893 Q96J71;Q14576;Q14576-2 ELAVL3 ELAV-like protein;ELAV-like protein 3 yes no 0 1 0 4 0 1 48.137 48.177 2 0.00022034 13152 20230619_1883_Aki_TMTPro18x_K_F4 121.5 110.35 70791 64229 63074 78987 52282 49328 52631 55291 57121 70639 106240 85543 71158 69335 84312 80720 78808 88221 65444 58905 64618 78161 55127 52316 53278 56550 59849 70976 105020 85704 74382 72616 85189 81370 75521 83679 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39381000 6989 3893 6626 13279 10680 10680 2573 1 9606 Homo sapiens -0.0664898824741158 EMEQLFSQYGR Unmodified 1386.6238 0.6238001 3893 Q96J71;Q14576;Q14576-2 ELAVL3 ELAV-like protein;ELAV-like protein 3 yes no 0 0 0 5.67 0.471 1 2 58.758 58.82 2;3 4.8459E-12 17424 20230619_1885_Aki_TMTPro18x_K_F5 206.73 165.28 140590 118810 138940 146840 101490 129410 121110 131760 149390 165010 168270 177290 176390 153000 169800 183190 170310 198310 130010 108990 140760 145780 109090 132220 121980 135360 151420 165320 172180 178560 179460 160230 172900 184410 163140 188090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 209020000 6990 3893 6626 13280;13281;13282 10681;10682 10681 2 9606 Homo sapiens -0.05404684384802749 EMFEDTVEER Unmodified 1283.534 0.53398204 2910 E9PC52;Q6FHQ0;Q16576;A8K6A2 RBBP7 Histone-binding protein RBBP7 yes no 0 0 0 1 0 1 48.259 48.259 2 5.381299999999999E-19 13660 20230619_1880_Aki_TMTPro18x_K_F1 244.55 216.16 252360 194420 190720 201990 162070 229850 194880 190440 248690 291200 272000 239440 318090 249040 223110 340510 310190 307310 232800 178130 198540 203800 172160 229400 196320 199950 251500 287360 279640 245940 318590 261530 234000 338480 295930 292240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 373180000 6991 2910 6627 13283 10683 10683 1 9606 Homo sapiens -0.09644358783998541 EMFEDTVEER Oxidation (M) 1299.5289 0.52889667 2910 E9PC52;Q6FHQ0;Q16576;A8K6A2 RBBP7 Histone-binding protein RBBP7 yes no 0 1 0 1 0 1 42.288 42.288 2 0.0015949 11089 20230619_1880_Aki_TMTPro18x_K_F1 115.86 106.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6992 2910 6627 13284 10684 10684 1732 1 9606 Homo sapiens -0.1088866264663011 EMFGSGTACVVCPVSDILYK Oxidation (M) 2248.0214 0.021412008 634 A0A024RAV0;P54687-4;P54687;P54687-5;P54687-3;P54687-2 BCAT1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 1 0 8 0 1 62.363 62.388 3 7.0417E-05 18806 20230619_1888_Aki_TMTPro18x_K_F8 77.39 68.226 43648 34325 37636 47059 42376 35508 45200 39522 51226 45070 46227 42042 53983 45511 49897 60257 46813 60727 40304 31532 38846 46312 43646 36904 45580 40287 51643 45182 47982 42988 54649 47622 50705 60305 44917 57623 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1024599999.9999999 6993 634 6628 13285 10685 10685 373 1 9606 Homo sapiens -0.05267784142324672 EMFNYAR Unmodified 929.40654 0.40653711 896 V9HW24;A0A087X2I1;P62333;H0YJC0;H0YJX2;H0YJS8 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 7 0 1 45.44 45.526 2 0.018192 11540 20230619_1887_Aki_TMTPro18x_K_F7 114.72 73.419 125450 102260 119110 123970 135000 172970 147400 141570 225720 145800 140770 132360 149550 119570 132490 160300 162630 164130 115950 93810 121840 124040 139650 170400 150200 146880 221890 146940 148720 134620 151570 125980 136840 160550 155320 155850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104870000 6994 896 6629 13286 10686 10686 1 9606 Homo sapiens -0.06098990076884547 EMFPYEASTPTGISASCR Oxidation (M) 2018.8714 0.87137695 668;675 A0A024RBE7;P42167;G5E972;H0YJH7;A0A024RBH7;P42167-2;Q59G12 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 1 0 5.5 0.5 1 1 50.826 50.903 3 1.0647E-13 14141 20230619_1885_Aki_TMTPro18x_K_F5 145.82 143.41 39664 39523 34320 41269 37921 41330 38142 43986 73525 50176 42942 46518 52182 51230 48802 61756 59219 44080 36685 36181 35401 41551 39194 41872 39519 44900 71634 50336 45918 47560 52883 53189 50324 60874 56455 42110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278250000 6995 668;675 6630 13287;13288 10687 10687 411 1 9606 Homo sapiens -0.09730388089815278 EMFPYEASTPTGISASCR Unmodified 2002.8765 0.87646233 668;675 A0A024RBE7;P42167;G5E972;H0YJH7;A0A024RBH7;P42167-2;Q59G12 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 0 0 5.5 0.5 1 1 55.04 55.112 3 1.606E-24 16042 20230619_1886_Aki_TMTPro18x_K_F6 215.15 200.9 35629 32391 29773 36103 28291 36333 30692 31326 34539 50758 42415 45430 54572 54153 44353 47853 46991 60644 32923 29678 30749 36156 29628 36612 30944 32869 35381 50089 43696 46616 54870 55238 45449 48900 45029 57415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 694780000 6996 668;675 6630 13289;13290 10688 10688 1 9606 Homo sapiens -0.0848608422718371 EMGFTNMTEIQHK Oxidation (M) 1580.6963 0.69631312 4606 Q9NVP1;Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 1 0 5.33 0.471 2 1 45.079 45.159 3 8.5646E-05 11258 20230619_1885_Aki_TMTPro18x_K_F5 98.942 77.989 78314 61674 70359 79485 79326 86171 80319 81488 93116 70330 82201 79047 78438 67169 78015 78776 86412 80428 72337 56618 72321 78881 81737 86517 81326 83287 93620 71981 84675 79488 80169 70286 79803 79073 82555 76396 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143950000 6997 4606 6631 13291;13292;13293 10689;10690 10689 2824;2825 2 9606 Homo sapiens -0.07080718373549644 EMGLPVGTAAIAPIIAAVK Unmodified 1821.0434 0.043391725 1137 Q9BQ52;Q9BQ52-4;B4DT15;A0A0S2Z5M8;B3KT00;G5E9D5;B3KSU9;Q9BQ52-2;E7ES68;B4E365;V9GYS7;H7C2I4 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes no 0 0 0 3 0 1 65.134 65.168 3 0.00010471 20573 20230619_1882_Aki_TMTPro18x_K_F3 80.361 72.45 7949.5 6717.5 11471 9646.1 9816.9 8919.8 9033.5 10663 11410 16263 11199 14577 13806 15395 16130 13198 11315 16716 7379.1 6172.5 11319 9496 10286 9119.3 9240.1 10915 11517 16076 11645 14874 14137 15729 16081 13507 10911 15820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20790000 6998 1137 6632 13294 10691 10691 1 9606 Homo sapiens 0.16571176450702296 EMGQMQVLQMK Unmodified 1321.6192 0.61924877 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90 RAD50 DNA repair protein RAD50 yes no 0 0 0 8 0 1 55.804 55.866 3 0.072136 16065 20230619_1888_Aki_TMTPro18x_K_F8 40.767 19.21 44909 38367 42789 46604 38931 45242 50065 46063 53349 44449 41873 44174 42076 39707 52516 50405 47618 45888 41522 35189 43615 46376 41059 45870 49924 46980 53683 45016 43559 44712 43464 41648 52936 50239 45596 43638 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7454800 6999 4309 6633 13295 10692 10692 1 9606 Homo sapiens -0.028696081235921156 EMGTPDVR Oxidation (M) 919.40693 0.40693104 2204 B2R4C1;P62899;H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899-2;B8ZZK4 RPL31 60S ribosomal protein L31 yes no 0 1 0 1.67 0.471 1 2 31.505 31.547 2 0.012315 6384 20230619_1880_Aki_TMTPro18x_K_F1 92.439 78.931 209980 153640 184580 187530 239220 249820 227910 241020 326380 222720 256350 252990 257690 217950 226630 231040 294390 262070 193840 141010 190440 187450 243980 247710 233430 246240 323790 227210 266290 254290 261580 226710 234740 233710 280790 248700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 662110000 7000 2204 6634 13296;13297;13298 10693;10694;10695 10693 1375 3 9606 Homo sapiens -0.055996151476847444 EMGTPDVR Unmodified 903.41202 0.41201641 2204 B2R4C1;P62899;H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899-2;B8ZZK4 RPL31 60S ribosomal protein L31 yes no 0 0 0 2.5 0.5 1 1 36.788 36.845 2 0.00014084 8403 20230619_1881_Aki_TMTPro18x_K_F2 174.69 151.76 306960 213950 263230 270500 328150 354940 311600 319110 447390 342360 358230 345260 404100 324100 298740 356010 442690 376930 283240 196480 272040 269620 335580 351680 319240 328990 444310 345160 373490 349700 406010 336850 313850 358270 421720 358030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 649540000 7001 2204 6634 13299;13300 10696;10697 10696 2 9606 Homo sapiens -0.043553112850759135 EMGTPLADTPTRPVTR Oxidation (M) 1756.8778 0.87778296 4008 Q53SW3;Q9BPU6 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 1 1 5.5 0.5 1 1 37.623 37.707 3 1.86E-06 8546 20230619_1885_Aki_TMTPro18x_K_F5 119.45 103.14 85744 70835 83383 86323 62773 62809 56372 58687 69915 78215 93817 86625 88762 77198 79484 94286 93997 88613 79272 64979 84564 85610 66647 65252 57738 60826 71434 78248 94845 87287 90321 80822 81870 94119 89758 84245 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 282250000 7002 4008 6635 13301;13302 10698;10699 10698 2644 2 9606 Homo sapiens 0.029619179238352444 EMGTPLADTPTRPVTR Unmodified 1740.8829 0.88286834 4008 Q53SW3;Q9BPU6 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 1 6.5 0.5 1 1 41.667 41.738 3 2.1532E-11 9964 20230619_1887_Aki_TMTPro18x_K_F7 163.9 145.76 151800 123010 157110 138710 91044 114140 99840 92402 104390 163670 157760 144200 163000 128520 132100 155850 156880 147160 140390 112770 158010 138550 100130 116830 100510 97898 108480 160920 159450 146710 164630 134600 136360 155640 149790 139900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 83620000 7003 4008 6635 13303;13304 10700;10701;10702 10702 3 9606 Homo sapiens 0.042062217864440754 EMGVIAAMR Unmodified 976.48341 0.48340722 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KW72;Q96L66;A0A8I5KTQ3;E9PLT0;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;A0A8I5KPQ8;A0A8I5KS07 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 0 7 0 1 50.022 50.103 2 0.0041527 13644 20230619_1887_Aki_TMTPro18x_K_F7 95.741 69.802 291930 221130 242690 297350 227380 310730 312980 290680 341490 356910 288010 282650 375990 303440 310250 353580 344700 305470 269440 203130 250850 294080 240270 312540 311370 300160 344440 354960 301840 290990 377750 315060 318750 351730 329200 290790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107540000 7004 88 6636 13305 10703 10703 1 9606 Homo sapiens -0.005775148520569928 EMHRPELVTK Oxidation (M) 1254.6391 0.63905624 2127 A8K8X0;Q14CX7-2;Q14CX7;H0YHR9 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes no 0 1 1 5.5 0.5 1 1 33.336 33.399 4 0.044927 7034 20230619_1886_Aki_TMTPro18x_K_F6 69.01 29.301 41245 18846 35675 44263 43492 38597 42849 37741 51103 44372 52141 49713 54322 39500 42209 54638 50983 53564 37990 17499 36860 42478 44489 39423 43483 38831 51614 44664 53509 49907 54755 41909 43689 54563 48714 50877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34458000 7005 2127 6637 13306;13307 10704 10704 1335 1 9606 Homo sapiens 0.021922272030451495 EMHVGHLR Oxidation (M) 993.48143 0.48143338 3650 P54136;P54136-2 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 1 0 5.5 0.5 1 1 25.072 25.126 3 0.011391 4225 20230619_1885_Aki_TMTPro18x_K_F5 70.69 55.251 8075.8 2781.8 6427.5 6049.4 6778.1 6084.6 7677.5 9084.1 9809.8 8294.5 8607.6 9179.1 12079 6601.3 7621.3 8897 8319.6 7914.8 7427.8 2551.6 6667.8 5841 7033.1 6215.5 7757.1 9045.4 9824.1 8448.4 9038.2 9190.3 11980 7030.4 7873.1 8845.7 7950.6 7529.4 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8119700 7006 3650 6638 13308;13309 10705;10706 10705 2342 2 9606 Homo sapiens -0.01556807545648553 EMHVGHLR Unmodified 977.48652 0.48651876 3650 P54136;P54136-2 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 29.24 29.293 3 0.00086943 5557 20230619_1886_Aki_TMTPro18x_K_F6 120.46 98.309 21018 7975.2 20232 22156 22527 23339 26229 29365 28378 27845 41578 47146 40335 37178 26046 28744 34830 43856 19363 7440.9 20666 21204 23304 23621 26313 29539 29286 28794 41997 46616 40539 38227 27239 29865 33303 41462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23699000 7007 3650 6638 13310;13311 10707 10707 1 9606 Homo sapiens -0.003125036830283534 EMIDIYSTR Oxidation (M) 1142.5278 0.52777445 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O43242-2;O95325 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 1 0 3 0 1 44.908 44.981 2 0.0016646 11829 20230619_1882_Aki_TMTPro18x_K_F3 108.81 97.296 88256 66174 81892 93988 98268 104280 98913 96280 137730 103500 119020 110110 103020 97242 102710 123470 116220 122820 81516 60826 84035 92723 100840 104470 100860 99121 137230 104510 122230 111120 105730 102070 105320 123560 111110 116640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73504000 7008 2361 6639 13312 10708 10708 1464 1 9606 Homo sapiens -0.03778832224884354 EMIDIYSTR Unmodified 1126.5329 0.53285983 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O43242-2;O95325 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 4 0 1 51.202 51.23 2 6.7235E-06 14549 20230619_1883_Aki_TMTPro18x_K_F4 180.44 159.14 161900 126750 134790 162070 148660 191680 166000 164950 257030 202420 181130 183530 203260 170490 175080 205390 201670 213250 149450 116350 139600 161090 154250 190890 169080 171340 253570 202180 190350 186700 205460 178200 180170 206180 192780 202420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110180000 7009 2361 6639 13313 10709 10709 1 9606 Homo sapiens -0.025345283622755232 EMIFEVLAPLAENDAIK Unmodified 1901.9809 0.98085105 2366 B3KNU0;P52306-4;P52306;P52306-5;B7Z4M5;P52306-6;P52306-2;P52306-3;B7Z2V8 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes no 0 0 0 6 1.41 1 1 1 1 1 66.302 66.33 3 2.3893E-10 20645 20230619_1887_Aki_TMTPro18x_K_F7 144.4 110.72 54994 46852 55415 59967 48951 59469 55232 52649 63176 60419 70311 67284 63546 59115 68848 73344 68842 80670 50868 42996 56191 59466 51574 60005 55594 54497 64169 60867 71501 67752 65352 61987 69947 73869 65950 76499 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 82685000 7010 2366 6640 13314;13315;13316;13317;13318 10710;10711;10712 10712 3 9606 Homo sapiens 0.0659398559184865 EMIFEVLAPLAENDAIK Oxidation (M) 1917.9758 0.97576567 2366 B3KNU0;P52306-4;P52306;P52306-5;B7Z4M5;P52306-6;P52306-2;P52306-3;B7Z2V8 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes no 0 1 0 5 0 1 64.906 64.95 3 0.016402 20156 20230619_1885_Aki_TMTPro18x_K_F5 50.178 32.689 14540 15596 16004 17527 14511 16070 14530 17503 14192 18904 24082 20770 19850 15502 21042 21303 19918 23169 13482 14283 16120 17529 15185 16400 14664 17816 14878 19067 24038 20840 20433 16480 21317 21417 19091 21975 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20802000 7011 2366 6640 13319 10713 10713 1465 1 9606 Homo sapiens 0.05349681729239819 EMIQHCVNANIDEAYK Unmodified 1933.8662 0.866232 2664 Q75MT5;B5BUD2;P35250-2;P35250;A0A087WVY3;H7C5P4;H7C596 RFC2 Replication factor C subunit 2 yes no 0 0 0 5 0 1 48.937 49.014 3 1.4455E-08 13311 20230619_1885_Aki_TMTPro18x_K_F5 139.29 124.04 52290 41934 55269 54312 41571 57336 54052 49933 60648 86723 71418 69143 101330 77825 55834 109180 97389 107590 48368 38495 55698 53871 44685 57557 54005 52508 62002 85126 74005 71327 100290 81716 60167 108950 92850 102170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117850000 7012 2664 6641 13320 10714 10714 1 9606 Homo sapiens -0.06334647161747853 EMKPPTSQEEWEAEFQR Unmodified 2120.9473 0.94731909 4148 Q7KZN9-2;Q7KZN9;A0A3B3IRX1 COX15 Cytochrome c oxidase assembly protein COX15 homolog yes no 0 0 1 4 0 1 52.505 52.529 3 1.9935E-09 15164 20230619_1883_Aki_TMTPro18x_K_F4 137.91 128.81 52045 37572 43231 47095 41105 50673 53135 50175 49558 54098 66121 74610 60625 64581 72956 64926 76225 90661 48021 34495 44651 46827 43230 50943 52777 51421 51339 55072 66916 74448 62721 66934 74110 66704 73000 85785 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20849000 7013 4148 6642 13321 10715 10715 1 9606 Homo sapiens -0.06831667917958839 EMLGGEIIPR Unmodified 1113.5852 0.58522975 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5 DDB1 DNA damage-binding protein 1 yes no 0 0 0 4.5 0.5 1 1 53.345 53.365 2 0.0055305 15191 20230619_1885_Aki_TMTPro18x_K_F5 89.029 41.962 158450 143390 161110 156520 143550 176770 166100 164150 207010 178140 166380 152790 176880 158840 159800 167460 183660 191420 146630 131360 163160 157330 151290 176930 167450 168930 206920 178620 172980 156480 179480 164150 164150 169470 175540 181530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46611000 7014 1710 6643 13322;13323 10716;10717 10717 2 9606 Homo sapiens 0.03298054771335046 EMLQQSK Oxidation (M) 878.41677 0.41676744 751;3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7;A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9;Q58FF7 EL52;HSP90AA1;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 0 1 0 5.75 0.433 1 3 36.563 36.635 2;3 0.017363 8253 20230619_1885_Aki_TMTPro18x_K_F5 101.43 52.869 263250 152920 327020 339220 344620 430810 319080 387140 393460 318040 410780 494540 395740 365310 420320 223240 511410 482320 243470 141640 327270 328090 356220 427140 325810 396540 396990 330530 420630 488990 405800 373730 430840 241800 488230 455470 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 220780000 7015 3177;751 6644 13324;13325;13326;13327 10718;10719;10720;10721;10722 10719 451 5 9606 Homo sapiens -0.027304271423076898 EMLQQSK Unmodified 862.42185 0.42185282 751;3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7;A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9;Q58FF7 EL52;HSP90AA1;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 0 0 0 6 0.816 1 1 1 41.159 41.243 2 0.0046171 10026 20230619_1886_Aki_TMTPro18x_K_F6 147.06 81.282 275930 137030 335430 318590 447070 509830 310110 422480 406300 298500 424360 463560 391350 367850 418490 174190 471610 402570 254970 127150 337310 308950 452040 498530 324030 433920 408820 313490 433420 459350 401980 372440 426570 191830 450240 380190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1059199999.9999999 7016 3177;751 6644 13328;13329;13330 10723 10723 1 9606 Homo sapiens -0.014861232796874901 EMLTADNLDIDNMR Unmodified 1649.7389 0.73890622 2443 B3KY42;Q96PZ0;Q96PZ0-2;B3KRB2 PUS7 Pseudouridylate synthase 7 homolog yes no 0 0 0 2.5 0.5 1 1 58.112 58.134 3 0.076943 17694 20230619_1882_Aki_TMTPro18x_K_F3 38.714 32.416 30772 25268 30132 29888 27659 35281 34722 30060 33616 34941 35996 33858 39208 34242 35957 39113 38151 41170 28450 23172 30633 29879 29143 35140 34564 31213 34413 35027 36952 34449 39765 35570 36760 39334 36503 39071 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30161000 7017 2443 6645 13331;13332 10724 10724 1 9606 Homo sapiens -0.05997368035968975 EMLTLPTFPVVVK Unmodified 1472.8313 0.83127368 4190 Q92777;Q86VA8;Q92777-2;Q59GM1;B3KSV8;A0A024R2F6;B4DI62 SYN2 Synapsin-2 yes no 0 0 0 2.5 0.5 1 1 64.085 64.105 3 0.00037747 20276 20230619_1882_Aki_TMTPro18x_K_F3 93.623 72.372 23915 20673 27323 24166 27252 26643 18163 29955 25595 28519 28634 27548 35118 30093 33481 34473 35999 36972 22147 18953 27436 24170 28050 26842 19128 30295 25813 28860 29515 28117 35561 31197 34218 34709 34426 35086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292560000 7018 4190 6646 13333;13334 10725 10725 1 9606 Homo sapiens 0.11377129830498234 EMMSHAEGQQR Oxidation (M) 1318.5394 0.53941855 1195 A0A140VJQ6;Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 yes no 0 1 0 2.5 0.5 1 1 25.565 25.673 3 0.0073444 4329 20230619_1881_Aki_TMTPro18x_K_F2 68.069 52.529 857.75 1391.8 0 0 0 1651.9 0 0 0 0 1345.3 0 1162.5 0 1119.9 0 1449.2 1228.5 791.44 1261.7 0 0 0 1506.3 0 0 0 0 1299.5 0 1182.8 0 1151.2 0 1381.9 1154.6 1 1 0 0 0 1 0 0 0 0 1 0 1 0 1 0 1 1 1350700 7019 1195 6647 13335;13336 10726 10726 731 1 9606 Homo sapiens -0.10710958473214305 EMMSHAEGQQR Unmodified 1302.5445 0.54450393 1195 A0A140VJQ6;Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 yes no 0 0 0 2 0 1 29.626 29.695 3 0.0013858 5614 20230619_1881_Aki_TMTPro18x_K_F2 98.353 95.035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7020 1195 6647 13337 10727 10727 1 9606 Homo sapiens -0.09466654610582736 EMNDAAMFYTNR Oxidation (M) 1477.5966 0.59659908 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;B4DNY3;B4DNA3;B4DUZ8;Q5T0R2;Q5T0R1;Q5T0R4;Q5T0R3;Q5T0R5;Q5T0R6;Q5T0R7;Q5T0R9 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 1 0 3.6 0.49 2 3 46.036 46.097 2;3 0.00013396 12195 20230619_1883_Aki_TMTPro18x_K_F4 101.32 98.177 73600 58574 70359 69388 83831 87582 81568 93226 105030 93540 99217 97637 98194 82397 92643 103270 102330 101410 68019 53725 71933 69456 85954 87325 83124 94792 105410 94647 102010 98444 99989 86602 94896 103310 97806 96347 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129940000 7021 2327 6648 13338;13339;13340;13341;13342 10728;10729;10730 10728 1437;1438 3 9606 Homo sapiens -0.12309535987492382 EMNDAAMFYTNR Unmodified 1461.6017 0.60168445 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;B4DNY3;B4DNA3;B4DUZ8;Q5T0R2;Q5T0R1;Q5T0R4;Q5T0R3;Q5T0R5;Q5T0R6;Q5T0R7;Q5T0R9 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 0 0 4.5 0.5 1 1 51.424 51.476 3 0.026118 14684 20230619_1883_Aki_TMTPro18x_K_F4 55.213 50.23 124070 98977 111190 108490 119130 144930 124270 133230 185990 107840 98714 108880 116960 105860 116330 131170 124700 116750 114610 90716 114140 109310 123510 143490 126860 136180 182290 110560 106270 110430 118870 110590 118840 130570 119170 111070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120170000 7022 2327 6648 13343;13344 10731 10731 1 9606 Homo sapiens -0.11065232124860813 EMNEFIHK Unmodified 1046.4855 0.48551571 1342 Q8TEZ9;Q6PJQ9;A0A2R8Y2Y1;A0A7P0Z4K1;Q8TF01 SFRS18;PNISR Arginine/serine-rich protein PNISR yes no 0 0 0 5 0 1 46.547 46.623 3 0.014502 12311 20230619_1885_Aki_TMTPro18x_K_F5 74.162 36.686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7023 1342 6649 13345 10732 10732 1 9606 Homo sapiens -0.03586762842610369 EMNPALGIDCLHK Oxidation (M) 1512.7065 0.70648388 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 1 0 5.5 0.5 1 1 48.104 48.182 3 2.6607E-06 12961 20230619_1885_Aki_TMTPro18x_K_F5 132.23 113.4 972640 851250 907120 1013400 1019200 1017500 1019900 1002800 1142400 1114800 1106300 1057500 1218300 980890 1029500 1337400 1176100 1265400 899270 780540 929100 1010200 1049200 1028700 1032200 1028600 1155900 1119000 1141200 1074300 1230700 1033500 1060000 1333200 1124500 1202300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1037099999.9999999 7024 2633 6650 13346;13347 10733;10734 10733 1584 2 9606 Homo sapiens -0.029361106483293042 EMNPALGIDCLHK Unmodified 1496.7116 0.71156925 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 6 0.816 1 1 1 51.826 51.901 3 8.3987E-11 14701 20230619_1886_Aki_TMTPro18x_K_F6 162.1 150.41 490100 438740 465080 462820 440040 513480 512780 460480 537760 588620 495800 497920 679710 530400 533770 649240 613540 556070 453260 401820 474180 466330 461230 514350 513560 477620 545430 585340 518710 510750 680700 552530 550340 645020 585860 529350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2675600000 7025 2633 6650 13348;13349;13350 10735;10736 10735 2 9606 Homo sapiens -0.01691806785697736 EMNPNYTEFK Unmodified 1271.5492 0.54923818 2663;98 P49840;A0A024R0L5;A8MT37;Q68D16;A0A7I2YQG6;A0A7I2V511;A0A7I2V2N4;A0A7I2YQ81;A0A7I2V589;A0A7I2V4Z1;A0A7I2V5B3;A0A7I2V2P8;P49841-2;P49841;B5BUC0;Q6FI27;A0A7I2YQK0;A0A3B3ITW1;A0A7I2V3D8;A0A7I2V4W7 GSK3A;DKFZp686D0638;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta no no 0 0 0 5 0 1 50.722 50.798 2 0.022923 14091 20230619_1885_Aki_TMTPro18x_K_F5 74.464 53.944 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7026 98;2663 6651 13351 10737 10737 1 9606 Homo sapiens -0.07567447196197463 EMPQDLR Unmodified 887.4171 0.41710179 1650 A0A7I2V697;A0A7I2V4T9;A0A7I2V2U2;A0A7I2V5Z3;A0A7I2V588;O43765;B4DEA6;K7EMD6 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 0 0 2 0 1 39.895 39.965 2 0.043195 9773 20230619_1881_Aki_TMTPro18x_K_F2 89.296 66.253 146790 113590 147470 146560 156040 172860 158950 154010 226750 191020 205670 188030 209390 159560 171560 214150 210690 194660 135700 104290 149870 145640 161610 172370 162170 159620 226220 191080 211980 190160 211710 168480 177510 213110 201100 185160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85155000 7027 1650 6652 13352 10738 10738 1 9606 Homo sapiens -0.031110074224557138 EMQDLSEFCSDKPK Oxidation (M) 1728.7335 0.73348649 4319 Q96A33;Q96A33-2 CCDC47 Coiled-coil domain-containing protein 47 yes no 0 1 1 3.5 0.5 1 1 47.125 47.185 4 4.2407E-06 12694 20230619_1883_Aki_TMTPro18x_K_F4 127.71 112.79 80835 70737 77859 93491 88236 88304 88774 92823 108690 96367 95937 99952 99918 79884 93310 120430 104930 108370 74756 64930 79577 92456 90806 89808 90100 94622 109080 97316 99234 100670 101520 85210 95796 119600 100310 103040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70529000 7028 4319 6653 13353;13354 10739 10739 2727 1 9606 Homo sapiens -0.10173091618457875 EMQDLSEFCSDKPK Unmodified 1712.7386 0.73857187 4319 Q96A33;Q96A33-2 CCDC47 Coiled-coil domain-containing protein 47 yes no 0 0 1 5 0 1 51.679 51.754 4 2.6972E-06 14522 20230619_1885_Aki_TMTPro18x_K_F5 122.93 103.87 64235 68927 71469 76557 68081 94928 95092 86702 105080 91155 88182 82813 102160 79077 91181 100630 93140 97351 59568 63119 72028 76942 71837 94371 94576 89266 105780 91676 91854 84367 103250 82880 93073 100570 89126 92484 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63929000 7029 4319 6653 13355 10740 10740 1 9606 Homo sapiens -0.08928787755826306 EMQDVQGALQCYTR Unmodified 1697.7501 0.7501396 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2;O15294-4 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 0 6 0 1 53.944 54.021 3 5.3845E-07 15643 20230619_1886_Aki_TMTPro18x_K_F6 134.81 122.52 52094 40680 50661 51548 40344 50676 50907 48121 65071 45574 47379 43905 50748 39763 51776 45683 50100 47545 48145 37339 51439 51157 43079 51235 51152 49292 64716 46190 49577 44523 51718 41490 52502 45940 47934 45148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73357000 7030 1842 6654 13356 10741 10741 1 9606 Homo sapiens -0.07082545941807439 EMQENDASMR Oxidation (M) 1225.4703 0.47033593 3533 P31930;B4DUL5;B4DZB9 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 1 0 1 0 1 29.399 29.399 2 0.00011841 5750 20230619_1880_Aki_TMTPro18x_K_F1 140.17 112.35 13021 6206.3 18068 17825 25848 27715 22426 22751 30769 13315 22320 21690 22501 18108 20375 10071 24624 23399 12047 5785.4 18051 17149 26135 27134 23058 23330 30468 14255 23298 21514 22856 18393 20930 11031 23510 22088 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15737000 7031 3533 6655 13357 10742 10742 2196 1 9606 Homo sapiens -0.13338042492796376 EMQNLSFQDCYSSK Unmodified 1735.7182 0.71817077 1410 A0A384MDW7;P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes no 0 0 0 6 0 1 53.214 53.291 3 1.6252E-05 15335 20230619_1886_Aki_TMTPro18x_K_F6 114.69 104.06 56435 47953 55696 44697 58080 61342 73180 73140 86109 80898 91710 99983 89318 88953 85812 116150 87254 100910 52191 43882 56621 45708 60530 61072 73302 74077 87176 81922 93786 100300 91154 93453 87580 115340 83565 95953 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253990000 7032 1410 6656 13358 10743 10743 1 9606 Homo sapiens -0.12025958415597415 EMQPTHPIR Oxidation (M) 1123.5444 0.54442757 2805;3511;3535 D0PNI1;P63104;E7EX29;B0AZS6;P63104-2;B7Z2E6;H0YB80;Q2F831;P27348;B4DMT8;Q53S41;B4DY04;V9HWD6;P31946-2;P31946;B5BU24 YWHAZ;YWHAQ;HEL-S-1;YWHAB 14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed no no 0 1 0 4.56 1.67 1 1 2 5 4 3 1 1 26.542 26.611 3 5.1065E-05 4625 20230619_1885_Aki_TMTPro18x_K_F5 143.03 119 2847800 2150200 2516500 2808100 3274300 2976400 2900200 2949700 3589800 3430400 4300700 4022300 3652000 3290300 3417400 3642300 4410200 3922600 2629500 1974500 2595900 2783700 3327800 2997900 2967800 3028400 3644800 3459000 4348000 4032500 3738500 3435900 3535000 3669800 4206700 3724600 21 20 21 23 21 22 22 23 22 22 23 23 23 23 22 22 22 23 15528000000 7033 2805;3511;3535 6657 13359;13360;13361;13362;13363;13364;13365;13366;13367;13368;13369;13370;13371;13372;13373;13374;13375;13376 10744;10745;10746;10747;10748;10749;10750;10751;10752;10753;10754;10755;10756;10757;10758;10759;10760;10761;10762;10763;10764;10765;10766;10767 10758 1673 24 9606 Homo sapiens -0.012402865482727066 EMQPTHPIR Unmodified 1107.5495 0.54951295 2805;3511;3535 D0PNI1;P63104;E7EX29;B0AZS6;P63104-2;B7Z2E6;H0YB80;Q2F831;P27348;B4DMT8;Q53S41;B4DY04;V9HWD6;P31946-2;P31946;B5BU24 YWHAZ;YWHAQ;HEL-S-1;YWHAB 14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed no no 0 0 0 4 2 1 1 1 1 1 1 1 31.031 31.091 3 1.5664E-08 6049 20230619_1885_Aki_TMTPro18x_K_F5 196.79 153.93 265810 201280 248740 247620 300600 308230 298420 298780 383470 296110 346510 362460 351350 307660 314610 323980 401880 338580 245540 184720 254850 247110 308060 306920 303600 305780 384070 301590 357540 363050 356850 319950 325390 326160 383240 321660 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 5604500000 7034 2805;3511;3535 6657 13377;13378;13379;13380;13381;13382;13383 10768;10769;10770;10771;10772;10773 10771 6 9606 Homo sapiens 4.017314358861768E-05 EMQYFMQQWTGTNK Oxidation (M) 1806.7705 0.7705407 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 1 0 4.5 3.5 1 1 57.692 57.718 3 0.00085517 17529 20230619_1880_Aki_TMTPro18x_K_F1 79.022 68.234 68236 61480 64636 84001 64483 67171 68888 73038 81169 82190 87580 83555 83728 77727 91314 99574 85004 99112 63108 56447 66064 82726 67100 69341 69615 74484 82260 82608 89383 84616 85970 81497 92428 99660 81490 94090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 124860000 7035 630 6658 13384;13385 10774;10775 10774 364 2 9606 Homo sapiens -0.10057375282030989 EMQYFMQQWTGTNK Unmodified 1790.7756 0.77562607 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 2.5 0.5 1 1 62.799 62.818 3 1.0287E-11 19584 20230619_1882_Aki_TMTPro18x_K_F3 176.58 159.01 158040 125150 145270 149150 93363 146280 137170 134970 152450 193550 180720 211520 224270 169200 187490 211640 203400 237490 146010 114800 147910 148640 102640 147800 136340 140280 155780 192930 186190 212330 225600 178310 192320 213360 194700 225170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 412050000 7036 630 6658 13386;13387 10776 10776 1 9606 Homo sapiens -0.08813071419399421 EMSCIAEDVIIVTSSLTK Unmodified 1994.9904 0.99042946 4753 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 7 0.816 1 1 1 67.844 67.872 3 1.7427E-06 21059 20230619_1888_Aki_TMTPro18x_K_F8 103.13 95.422 11159 6124.8 7640.9 11655 10093 9267.7 7209.1 8248.4 13372 9641.6 11452 8799.8 12837 8064.1 11452 12935 10384 12585 10270 5660.4 8109.4 11268 10221 9527.3 7628.3 8539 13188 9654.8 11879 8965.6 12971 8614.8 11620 12894 9961 11949 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 50333000 7037 4753 6659 13388;13389;13390 10777;10778;10779 10778 3 9606 Homo sapiens 0.03273385815009533 EMSCIAEDVIIVTSSLTK Oxidation (M) 2010.9853 0.98534408 4753 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 1 0 6 0 1 65.751 65.794 3 0.055748 20654 20230619_1886_Aki_TMTPro18x_K_F6 44.391 34.603 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7038 4753 6659 13391 10780 10780 2899 1 9606 Homo sapiens 0.02029081952400702 EMTGIWR Unmodified 891.42727 0.42727255 2612 B4DWC4;Q6FIC5;Q9Y696;B3KTR3 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 0 0 7.5 0.5 1 1 48.833 48.909 2 0.015722 13073 20230619_1887_Aki_TMTPro18x_K_F7 110.9 65.508 442600 365480 449380 350400 343200 430080 380420 423780 518070 623440 508110 527850 610460 478000 461010 614940 589240 558330 409340 334560 453730 356680 366540 428860 386050 438340 520420 616310 526200 538260 612530 502180 479320 612150 562330 531020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 300330000 7039 2612 6660 13392;13393 10781 10781 1 9606 Homo sapiens -0.02278399697217992 EMTLDEWK Oxidation (M) 1066.4641 0.46411156 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 1 0 2 0 1 51.415 51.46 3 0.0019319 15081 20230619_1881_Aki_TMTPro18x_K_F2 101.6 63.298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7040 4246 6661 13394 10782 10782 2709 1 9606 Homo sapiens -0.06646192661992245 EMTLDEWK Unmodified 1050.4692 0.46919694 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 0 3.5 0.5 1 1 56.593 56.63 2 4.5051E-10 16882 20230619_1883_Aki_TMTPro18x_K_F4 180.93 120.14 142810 130320 140340 146700 122800 173110 152570 158170 249150 180290 155480 138950 164030 134820 150860 163640 166960 153220 132130 119420 142600 147190 130230 172640 155030 163150 244440 179970 164160 142820 166540 140790 154580 163370 159500 145690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139040000 7041 4246 6661 13395;13396 10783;10784 10784 2 9606 Homo sapiens -0.05401888799360677 EMVANWDSLR Unmodified 1219.5656 0.56555694 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;A0A6I8PIP7;Q9P2J5-3;Q9HAM7;Q9NPU8;Q9NVC0;Q9NVP8 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 4.5 0.5 1 1 54.517 54.559 2 4.2983E-05 15658 20230619_1885_Aki_TMTPro18x_K_F5 148.56 129.46 122490 115180 142200 138620 100860 152270 113170 132110 192000 258150 246400 236870 268940 218770 174370 285720 270240 303850 113520 105600 142190 138270 108800 152420 116000 139630 193620 253440 250980 240820 269260 229920 184900 286690 257870 288280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309680000 7042 1603 6662 13397;13398 10785 10785 1 9606 Homo sapiens -0.035443212394284274 EMVDYVANYMEGIEGR Unmodified 1874.8179 0.81788482 1682 A0A7L4XSC9;A0A7M2JGN3;A0A7L4XVG2;Q53Y41;Q6IBS8;A0A7S6PWV5;B4DPL5;A0A7L4XVT7;A0A7L4XUZ5;A0A7S6PWV2;A0A7L4XT53;A0A7L4XT01 DDC yes no 0 0 0 5 0 1 64.667 64.712 3 0.00010747 20030 20230619_1885_Aki_TMTPro18x_K_F5 82.707 64.294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7043 1682 6663 13399 10786 10786 1 9606 Homo sapiens -0.0845314080170283 EMVELPLR Oxidation (M) 1001.5216 0.52156686 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 1 0 3.5 0.5 1 1 48.008 48.068 2 0.011671 13065 20230619_1883_Aki_TMTPro18x_K_F4 93.195 50.195 84145 64080 69285 86642 100110 98505 96078 92716 131710 104070 104930 102610 105530 86159 96681 113880 105450 109020 77660 58865 72179 85758 101440 98593 98142 95426 131030 104590 108920 103700 107260 90898 99049 113670 100830 103590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 451900000 7044 3656 6664 13400;13401 10787 10787 2357 1 9606 Homo sapiens 0.020866943342639388 EMVELPLR Unmodified 985.52665 0.52665224 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 0 4.5 0.5 1 1 53.464 53.51 2 0.046732 15596 20230619_1883_Aki_TMTPro18x_K_F4 71.501 47.944 557680 493290 566580 633270 532490 772450 591990 629170 1042300 756180 741160 740090 757440 695990 767590 867610 795570 842110 516000 452630 574910 629610 559760 766720 607210 655910 1023400 757890 775240 750720 773570 728230 782480 867410 761250 799940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 733780000 7045 3656 6664 13402;13403 10788 10788 1 9606 Homo sapiens 0.0333099819687277 EMVLELIR Unmodified 1001.558 0.55795237 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 6.5 0.5 1 1 61.65 61.689 2 2.4519E-05 18853 20230619_1886_Aki_TMTPro18x_K_F6 133.55 0 418830 372100 381820 447440 399950 527230 437310 448940 648430 371830 331410 290300 325820 272770 405830 368540 349670 336110 387210 341210 391730 446610 416180 525060 445050 461950 635170 378120 354570 298080 336610 287080 407960 367120 335010 319640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178040000 7046 2644;4322 6665 13404;13405 10789;10790 10789 2 9606 Homo sapiens 0.057235712309761766 EMVPAKPPK Oxidation (M) 1011.5423 0.54230231 1903 A1L0T0;M0R026;Q59GP4;E9PJS0;M0QZX5;M0R1B5 ILVBL Acetolactate synthase-like protein yes no 0 1 1 8 0 1 39.241 39.228 4 0.020961 9169 20230619_1888_Aki_TMTPro18x_K_F8 75.378 58.053 39628 28634 37318 43777 45816 49404 45686 47538 58569 45812 53133 60128 56681 51575 51534 57679 68731 65114 36599 26347 38268 43012 46930 49469 46466 48650 58681 46852 54971 60095 57539 53791 53473 58264 65570 61780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18120000 7047 1903 6666 13406 10791 10791 1219 1 9606 Homo sapiens 0.036992847139231344 EMVQNLMVLR Unmodified 1231.6417 0.64169877 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4;A0A8Q3WL93;A0A8Q3WLT0;A0A8Q3WL80;E7EM57;Q0PHS1;A0A8Q3WL83;E9PD92 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 2 0 1 59.369 59.382 2 0.00032589 18363 20230619_1881_Aki_TMTPro18x_K_F2 131.41 93.116 109340 92153 94861 98125 102340 140720 124620 127970 164950 120430 107630 112430 105200 89916 153000 110490 114140 108650 101010 84422 97753 99200 106630 138720 125540 131350 163360 121960 113160 113700 109710 94588 152360 110750 109550 103240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99616000 7048 1464 6667 13407 10792 10792 1 9606 Homo sapiens 0.03514359336372763 EMVVFPLLYPEVFEK Unmodified 1838.9528 0.95284538 573 A0A024R9G7;Q6PL18;Q6PL18-2 ATAD2 ATPase family AAA domain-containing protein 2 yes no 0 0 0 8 0 1 66.594 66.613 3 2.4712E-05 20593 20230619_1888_Aki_TMTPro18x_K_F8 101.3 82.708 13382 12385 14188 15947 8409.7 10536 12712 10320 11823 15276 13774 13267 17316 14205 13404 15811 14360 14190 12390 11363 14270 15740 9310.4 11061 12547 10710 12191 15110 14191 13591 17369 14710 13765 15767 13729 13495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18556000 7049 573 6668 13408 10793 10793 1 9606 Homo sapiens 0.06692707402385167 EMWTEVPK Oxidation (M) 1034.4743 0.47428232 3719 P62316;P62316-2;K7EJB5 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 0 1 0 4 0.816 1 1 1 48.516 48.58 3 0.005804 13315 20230619_1883_Aki_TMTPro18x_K_F4 83.005 53.196 167430 148000 157840 155140 194570 191490 176370 181850 262040 202810 207960 179380 214610 167610 183190 205780 211410 200760 154830 135550 161640 156660 198710 190780 181500 186930 259820 203300 215950 182880 217270 175400 188510 205840 201930 190770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146570000 7050 3719 6669 13409;13410;13411 10794 10794 2400 1 9606 Homo sapiens -0.041575849367291084 EMWTEVPK Unmodified 1018.4794 0.4793677 3719 P62316;P62316-2;K7EJB5 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 0 0 0 4.67 0.471 1 2 53.459 53.505 2;3 0.0055609 15612 20230619_1883_Aki_TMTPro18x_K_F4 89.298 40.502 105290 92656 102410 106300 95336 116770 95854 89971 137480 117190 97648 92876 105280 81323 106400 112760 104060 92074 97380 84927 104180 106370 99781 116680 97900 94522 136130 116320 102370 94990 107230 85962 108080 111640 99501 87716 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230250000 7051 3719 6669 13412;13413;13414 10795;10796 10795 2 9606 Homo sapiens -0.029132810741202775 EMYLQSLFTPGQFTNEALCK Unmodified 2376.113 0.11300421 1809 A0A8V8NBT1;Q12769;G3V198;E9PR16;Q12769-3 NUP160 Nuclear pore complex protein Nup160 yes no 0 0 0 2 0 1 64.627 64.634 3 3.4977E-08 20667 20230619_1881_Aki_TMTPro18x_K_F2 114.34 111.24 4162 3916.1 5271.7 4176.7 4309 3712.8 4443.1 5167.4 4801.2 6546.3 5699 6423.2 7159.3 5580.3 4691.1 6726.7 5348.6 8038.9 3860.6 3586.3 5239.8 4197.1 4544.1 3828.1 4489.7 5212.3 4918.1 6532.4 5870.9 6493.8 7138.8 5850 4862.2 6807.8 5129.7 7611.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12546000 7052 1809 6670 13415 10797 10797 1 9606 Homo sapiens -0.020007774535315548 ENAAAPSPVR Unmodified 1010.5145 0.51450765 174 A0A024R207;B2RCL4;A0A024R1Y6;O75781-2;O75781;B7Z649;B3KMX3 PALM Paralemmin-1 yes no 0 0 0 3.5 0.5 1 1 32.722 32.787 2 0.00042358 6684 20230619_1882_Aki_TMTPro18x_K_F3 126.39 71.776 53745 31581 67828 74406 103760 116230 84220 98597 103230 57002 79875 75588 79783 61324 66106 37314 78020 69442 49717 29282 68318 72061 104410 113830 86645 100770 103000 60485 83000 75396 80742 62529 67948 39788 74475 65647 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39329000 7053 174 6671 13416;13417 10798;10799 10798 2 9606 Homo sapiens 0.009670977780501744 ENADIIR Unmodified 829.42938 0.42938104 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q96T67;Q5T9A4;Q5T9A4-3;Q9H834;Q5T9A4-2 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B yes no 0 0 0 2 0 1 37.117 37.177 2 0.0044379 8563 20230619_1881_Aki_TMTPro18x_K_F2 117.04 39.978 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7054 4603 6672 13418 10800 10800 1 9606 Homo sapiens 0.007843523122346596 ENADPRPPVQFPNLPR Unmodified 1845.9486 0.94858014 4065 Q5TDH0-2;Q5TDH0;Q5TDH0-3 DDI2 Protein DDI1 homolog 2 yes no 0 0 1 8 0 1 49.923 49.996 3 0.00012839 13482 20230619_1888_Aki_TMTPro18x_K_F8 93.909 80.496 40101 39209 38255 44862 48051 49399 44685 46971 53582 51093 53706 52326 56099 44549 45567 57021 58585 59279 37112 35925 39196 44902 49032 49573 45532 48258 54098 51456 55178 52817 56669 46890 47303 57190 55933 56277 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34190000 7055 4065 6673 13419 10801 10801 1 9606 Homo sapiens 0.05944379023685542 ENAEQGEVDMESHR Oxidation (M) 1645.6638 0.66382702 2266 B2R932;P14209-3;P14209 CD99 CD99 antigen yes no 0 1 0 1 0 2 29.279 29.279 3 6.4934E-10 5631 20230619_1880_Aki_TMTPro18x_K_F1 168.69 155.56 4181.4 3627.1 5076 5240 8758.9 6573.7 7078.8 6762.5 9887.7 6855.9 8766.3 10815 10338 8821 8175 9001.7 10036 10069 3874.7 3332.7 5135.4 5175.7 8738.8 6556.9 7316.8 6899.2 9861.3 7050.2 9127 10727 10400 9172.1 8457.7 9101.7 9584.4 9552.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128640000 7056 2266 6674 13420;13421 10802;10803 10802 1411 2 9606 Homo sapiens -0.13317834242820936 ENAEQGEVDMESHR Unmodified 1629.6689 0.6689124 2266 B2R932;P14209-3;P14209 CD99 CD99 antigen yes no 0 0 0 1 0 1 33.464 33.464 3 9.5122E-47 7345 20230619_1880_Aki_TMTPro18x_K_F1 302.41 291.14 25504 19670 21108 24394 30991 32975 26993 30013 31622 37481 38164 36887 39417 36026 32974 45456 54258 49286 23541 18052 21974 24354 31309 32628 27600 31043 32252 37456 38887 37463 39925 37688 34884 45699 51674 46790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 301570000 7057 2266 6674 13422 10804 10804 1 9606 Homo sapiens -0.12073530380189368 ENAEVDGDDDAEEMEAK Oxidation (M) 1881.7058 0.70581099 3389 Q53XC0;P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 1 0 1 0 1 40.631 40.631 3 1.6837E-13 10348 20230619_1880_Aki_TMTPro18x_K_F1 149.86 145.47 41909 22404 35245 44318 41273 60923 47829 43657 66075 56547 60246 81717 74366 63431 56275 70770 78051 105750 38618 20720 36528 43102 42740 59867 48377 46159 66030 57261 62828 81117 74617 66463 58831 72898 74660 99971 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116980000 7058 3389 6675 13423 10805 10805 1998 1 9606 Homo sapiens -0.19977368135641882 ENAGEDPGLAR Unmodified 1127.5207 0.52071524 3760 P81605;P81605-2 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes no 0 0 0 1 0 1 34.494 34.494 2 3.5286E-11 7778 20230619_1880_Aki_TMTPro18x_K_F1 167.09 135.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7059 3760 6676 13424 10806 10806 1 9606 Homo sapiens -0.03794428781111492 ENAPAIIFIDEIDAIATK Unmodified 1943.0252 0.025158703 2016 A8K2M0;P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 4.5 1.71 1 1 1 1 1 1 67.649 67.677 3 2.1155E-09 21197 20230619_1885_Aki_TMTPro18x_K_F5 124.63 110.97 31959 23176 24771 26772 29791 26753 25122 29802 29155 27472 32198 29199 31032 27754 29965 27869 26614 37620 29476 21260 25834 26752 30399 27145 25748 30161 29594 27938 32822 29528 31656 28694 30297 28556 25573 35588 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 88330000 7060 2016 6677 13425;13426;13427;13428;13429;13430 10807;10808;10809;10810;10811 10809 5 9606 Homo sapiens 0.09136713009661435 ENASPAPGTTAEEAMSR Oxidation (M) 1733.7526 0.75264203 731 P46379-3;P46379;P46379-2;A0A7I2V508;A0A0G2JK23;A0A024RCR6;A0A1U9X7A6;A0A1U9X7A9;A0A7P0MQS5;P46379-5;A0A0G2JL47;H0Y710 BAG6;BAT3 Large proline-rich protein BAG6 yes no 0 1 0 2 0 1 34.265 34.322 3 0.07049 7396 20230619_1881_Aki_TMTPro18x_K_F2 40.844 36.453 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7061 731 6678 13431 10812 10812 442 1 9606 Homo sapiens -0.08488419003174386 ENATVAHLVGALR Unmodified 1349.7415 0.74154747 3837 Q6LCB0;Q13158 FADD FAS-associated death domain protein yes no 0 0 0 1 0 1 50.297 50.297 3 6.3066E-05 14495 20230619_1880_Aki_TMTPro18x_K_F1 119.88 96.276 44893 43603 49071 49877 39436 48062 49488 45814 64038 49033 44803 55693 52145 49083 62055 58180 52648 41447 41592 39952 49366 49847 42040 48690 49758 47075 63615 49622 47300 55983 53493 51269 62382 57414 50386 39585 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 373040000 7062 3837 6679 13432 10813 10813 1 9606 Homo sapiens 0.0806663626617592 ENCLHYAR Unmodified 1061.4713 0.47126263 4299 Q92610;H0YM74 ZNF592 Zinc finger protein 592 yes no 0 0 0 4 0 1 31.165 31.229 3 0.0007358 6021 20230619_1883_Aki_TMTPro18x_K_F4 124.08 87.699 19682 13297 17744 19045 20197 21211 22750 17976 32725 22283 25021 18791 24614 23258 18044 22983 25514 23022 18165 12229 18232 18781 20866 21209 23075 18716 32426 22224 25960 19410 24848 23825 18903 23092 24323 21875 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9483200 7063 4299 6680 13433 10814 10814 1 9606 Homo sapiens -0.0570141527089163 ENCMYQACPTQDCNK Unmodified 1917.7114 0.71138761 3514 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 3.5 0.5 1 1 42.294 42.347 3 0.00010499 10575 20230619_1883_Aki_TMTPro18x_K_F4 95.236 91.13 18974 16326 18625 18833 20393 27920 20489 22025 27113 24071 30695 29818 34608 27757 23264 30803 34945 37159 17548 14966 18984 18932 21101 27395 20866 22954 27375 24407 31471 29956 34654 28876 24541 31236 33338 35218 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37117000 7064 3514 6681 13434;13435 10815 10815 1 9606 Homo sapiens -0.2107596263015239 ENCMYQACPTQDCNKK Unmodified 2045.8064 0.80635063 3514 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 1 6.5 0.5 1 1 40.759 40.839 4 0.00058437 9879 20230619_1886_Aki_TMTPro18x_K_F6 81.317 73.42 30965 21171 28047 32612 37611 44957 43253 42175 45471 44701 50851 54728 49312 53245 48571 45222 64518 63655 28581 19486 28920 32134 38489 44431 43338 43338 46404 45354 51887 55027 50435 54522 50261 46622 61570 60267 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63979000 7065 3514 6682 13436;13437 10816 10816 1 9606 Homo sapiens -0.17472029158989244 ENCPACSQLPQNIQFSPSAK Unmodified 2275.0362 0.03615087 2301 J3JZZ9;B2RBP3;Q8TBC4;Q8TBC4-2;F8W8D4;B7Z5F6 UBE1C;UBA3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 8 0 1 53.52 53.591 3 2.487E-11 15069 20230619_1888_Aki_TMTPro18x_K_F8 130.36 120.3 82118 63217 83671 75974 80667 92835 92001 85500 99620 106070 102200 98616 115400 91079 87630 135610 116410 132620 75916 57999 84784 75928 84352 92427 92350 88398 101220 105870 105260 100270 116020 96598 91459 135230 111210 125940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 256510000 7066 2301 6683 13438 10817;10818 10817 2 9606 Homo sapiens -0.05036575949998223 ENCPVPGKPGEAVAAR Unmodified 1650.8148 0.81478877 1407 B5BU32;A0A384MDV9;K7ERV3;P04183;B5BUF9;A0A024R8N6 TK1 Thymidine kinase;Thymidine kinase, cytosolic yes no 0 0 1 6 0 1 39.364 39.452 3 3.8392E-08 9260 20230619_1886_Aki_TMTPro18x_K_F6 133.16 118.07 94647 77514 93116 75529 47854 61663 65442 63437 95033 119060 102130 75870 136070 85526 77235 127870 104470 64519 87506 70967 93916 76367 53895 63503 65965 66170 95575 116020 105670 79410 134800 90222 81340 124140 99415 62098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233160000 7067 1407 6684 13439 10819 10819 1 9606 Homo sapiens 0.015413969264727712 ENDENCGPTTTVFVGNISEK Unmodified 2209.9797 0.97974143 3611 P49756;P49756-2;P49756-3;E9PQU5;E9PSE8;P49756-4 RBM25 RNA-binding protein 25 yes no 0 0 0 2 0 1 54.556 54.58 3 0.00019787 16442 20230619_1881_Aki_TMTPro18x_K_F2 72.568 63.522 15613 10050 12160 14010 14034 13353 12608 12691 14668 17964 16924 18753 21769 16923 13783 22115 19842 21407 14391 9242.4 12674 13809 14386 13542 12864 13156 14943 17892 17472 18937 21678 17798 14536 22074 18937 20334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17495000 7068 3611 6685 13440 10820 10820 1 9606 Homo sapiens -0.07684925305738943 ENDIKPLTSFR Unmodified 1318.6881 0.68811492 260 A0A024R3R5;Q14739;A0A494C1L1;C9JXK0;B4E0Z3 LBR Lamin-B receptor yes no 0 0 1 7.5 0.5 1 1 48.025 48.098 3 0.000386 12698 20230619_1887_Aki_TMTPro18x_K_F7 103.97 89.817 588790 479870 598000 536180 529090 572400 499650 542460 553740 686120 693840 569530 659400 531240 643230 576980 492630 423510 544500 439860 605140 537690 554190 575630 507840 559900 567310 681930 702970 582290 672730 551670 645670 570910 472320 404130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 873020000 7069 260 6686 13441;13442 10821;10822 10821 2 9606 Homo sapiens 0.041518387636415355 ENDPSVMR Unmodified 946.41783 0.41783007 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 1 0 1 33.926 33.926 2 0.0024507 7549 20230619_1880_Aki_TMTPro18x_K_F1 126.52 91.698 22456 15581 25483 22855 16788 21418 18672 17928 24583 26419 32111 25872 29742 23476 25574 19890 33815 31100 20768 14332 25486 22463 18203 21677 18927 18794 25004 26233 32436 26208 30220 24138 26498 20692 32255 29430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12257000 7070 3833 6687 13443 10823 10823 1 9606 Homo sapiens -0.05752212773393239 ENDWYLAYK Unmodified 1200.5451 0.54513908 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;V9H023;V9H0D5;V9H0B2;V9H015;V9H062;Q0ZAJ2 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 6 0 1 58.246 58.315 3 0.0037955 17389 20230619_1886_Aki_TMTPro18x_K_F6 72.006 38.966 58734 47478 58724 53742 46989 51143 47423 56716 61068 59622 57995 57931 63774 47379 59584 62555 60565 67395 54305 43525 59432 53767 49768 52060 48276 57612 61339 60034 59901 58534 64658 50069 60735 62876 57986 63935 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82676000 7071 3585 6688 13444 10824 10824 1 9606 Homo sapiens -0.04711168627591178 ENDYYTPTGEFR Unmodified 1490.6314 0.6313879 247 A0A024R3J7;P46977;P46977-2 hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 0 0 2 0.816 1 1 1 47.116 47.167 2 4.8774E-10 13135 20230619_1881_Aki_TMTPro18x_K_F2 191.53 165.14 289020 224590 266350 313680 298730 363840 366880 361180 419570 406490 435620 466920 474850 405300 434070 469400 449490 522970 267000 206370 273340 310000 309900 363860 367510 370370 425070 410240 448140 469120 481430 423550 443180 473570 430430 495880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 524230000 7072 247 6689 13445;13446;13447 10825;10826 10825 2 9606 Homo sapiens -0.09430253583559534 ENEALLLR Unmodified 956.5291 0.52909508 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 3 0 1 46.425 46.503 2 0.0016679 12527 20230619_1882_Aki_TMTPro18x_K_F3 149.65 35.957 443610 337330 385860 419610 403710 511800 456400 441170 548590 603360 526850 528310 666660 478300 483140 642620 663590 600480 409570 309610 397350 418140 420120 508760 459920 459830 553400 598820 547510 538010 666820 504180 505310 640280 632730 571020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 477560000 7073 385 6690 13448 10827 10827 1 9606 Homo sapiens 0.04909169926213508 ENEFSFEDNAIR Unmodified 1469.6423 0.64228694 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3;Q8TDI0;K7EMY3;Q659D0;Q659F1;F2Z2R5;Q6ZSZ4 CHD4;CHD5;DKFZp434P202;DKFZp434K213 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 yes no 0 0 0 1.5 0.5 2 2 52.168 52.187 2;3 1.573E-19 15249 20230619_1880_Aki_TMTPro18x_K_F1 202.18 177.48 125730 110250 128290 133540 123660 141860 143640 144140 166040 169340 168290 155720 179390 141190 156440 180010 170230 174350 116330 101110 130090 133080 129400 142870 144390 147750 168020 169370 172950 158270 181570 148240 160370 179890 162770 165640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 418670000 7074 1005 6691 13449;13450;13451;13452 10828;10829 10828 2 9606 Homo sapiens -0.07374851209237931 ENENGEEEEEEAEFGEEDLFHQQGDPR Unmodified 3191.2712 0.27116824 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 0 0 1 0 1 53.801 53.801 3 1.3547E-20 15957 20230619_1880_Aki_TMTPro18x_K_F1 157.73 151.76 12792 7481.8 12251 11846 5648.6 9945.2 13610 12444 11359 13928 11282 13922 12962 12925 13113 13905 12839 14246 11804 6894.2 12395 11580 6624.2 10243 13195 12585 11707 13988 11677 14086 13196 13410 13321 13977 12296 13522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 240030000 7075 1473 6692 13453 10830 10830 1 9606 Homo sapiens -0.23681649779064173 ENEQGEVDMESHR Oxidation (M) 1574.6267 0.62671323 916 A0A096LP69 CD99 yes yes 0 1 0 1 0 1 27.915 27.915 3 5.2098E-05 5172 20230619_1880_Aki_TMTPro18x_K_F1 108.23 101.19 1042.8 0 2159.9 2219.4 3062.3 3209.8 2027.8 2165.8 1886.2 1610.1 3152.1 4367.6 2571.7 3451.1 2223.1 2810.2 3288.1 3238.5 966.78 0 2114.6 2065.5 3076.7 3141.6 2102.7 2271.2 1977.7 1741.6 3156.8 4274.7 2635.6 3548 2328.8 2857.7 3135.4 3071.6 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7592000 7076 916 6693 13454 10831 10831 525 1 9606 Homo sapiens -0.13761505788579598 ENEVEEVKEEGPK Unmodified 1514.71 0.71003215 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 1 1.67 0.471 1 2 45.335 45.389 3;4 0.00025341 12328 20230619_1881_Aki_TMTPro18x_K_F2 100.45 88.094 345120 212950 266750 324940 301100 427890 300770 333610 520520 452250 422780 527200 559220 480400 332580 590100 614380 581330 318030 196080 278450 319980 311470 422310 310020 350380 514010 453330 444660 529980 556050 502800 359120 589960 584880 552370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1208200000 7077 4246 6694 13455;13456;13457 10832;10833 10833 2 9606 Homo sapiens -0.026734460691159256 ENEVLEAWK Unmodified 1116.5451 0.54513908 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 3 0.816 1 1 1 56.32 56.348 2;3 0.0015699 16796 20230619_1883_Aki_TMTPro18x_K_F4 87.298 59.556 83020 65602 75043 73070 65484 88139 84201 81226 104320 108350 89096 100230 121620 96135 92362 135670 117690 127030 76689 60138 76763 73409 69451 87805 84426 84167 104620 107820 93607 101990 121690 101430 96074 135070 112420 120720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62419000 7078 2337;3778;3779 6695 13458;13459;13460 10834;10835 10835 2 9606 Homo sapiens -0.008471686275925094 ENFQNWLK Unmodified 1077.5243 0.52434406 1438 A0A384MTL2;P37802;P37802-2;X6RJP6;B7Z5A2 TAGLN2 Transgelin-2 yes no 0 0 0 7.5 0.5 1 1 57.841 57.893 3 0.046524 16964 20230619_1887_Aki_TMTPro18x_K_F7 54.436 36.705 31771 27626 30436 31729 32851 30038 33416 32533 45411 38685 34495 32724 38247 35819 34566 39317 28799 31488 29379 25323 31064 31697 33920 30588 34023 33230 45148 38610 36056 33600 38758 37010 34925 39011 27629 29981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 496860000 7079 1438 6696 13461;13462 10836 10836 1 9606 Homo sapiens -0.01131714216603541 ENFSCLTR Unmodified 1025.46 0.46002924 3570 V9HWF2;P40925;P40925-3;A0A5K1VW95;P40925-2;B9A041;C9JF79;C9JRL4 HEL-S-32;MDH1 Malate dehydrogenase;Malate dehydrogenase, cytoplasmic yes no 0 0 0 5.5 1.12 1 1 1 1 43.016 43.091 2 0.0024793 10809 20230619_1886_Aki_TMTPro18x_K_F6 126.07 91.815 1293400 1061900 1172500 1291500 1360000 1329400 1432400 1403600 1778000 1450600 1720900 1570100 1638900 1470100 1491800 1815600 1901800 1765800 1195000 974120 1204500 1286100 1399100 1343700 1450500 1430200 1788000 1467900 1763500 1586600 1669300 1537500 1543900 1815200 1814700 1678200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1843899999.9999998 7080 3570 6697 13463;13464;13465;13466 10837;10838 10838 2 9606 Homo sapiens -0.05168237365023742 ENFSLDWCK Unmodified 1197.5125 0.51245874 3498 Q6FGU2;P23919;Q53F55;H7BZ20 DTYMK Thymidylate kinase yes no 0 0 0 6 0 1 58.476 58.541 2 0.00037798 17518 20230619_1886_Aki_TMTPro18x_K_F6 137.95 107.3 67621 66406 71639 75672 66458 74789 72220 77545 139860 84576 69088 54792 70674 59868 72234 79274 70464 66106 62636 60841 72383 75674 69735 75774 74531 79191 135680 84340 74171 57198 72188 62629 73367 78597 67407 62943 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58026000 7081 3498 6698 13467 10839 10839 1 9606 Homo sapiens -0.07839699022088098 ENGFGLAECCR Unmodified 1311.5336 0.53360489 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H962;A0A994J6V7;Q8IWJ0 HUWE1 E3 ubiquitin-protein ligase HUWE1 no no 0 0 0 3 0 1 44.435 44.508 2 0.027652 11591 20230619_1882_Aki_TMTPro18x_K_F3 69.276 35.023 24506 22681 26528 30476 24967 29116 25824 29977 36723 34049 43192 42190 42695 36327 33722 37252 49555 51737 22694 20819 26779 30112 26107 29558 26349 30673 37030 34445 43964 42265 43176 37735 35341 38217 47276 48978 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15052000 7082 594 6699 13468 10840 10840 1 9606 Homo sapiens -0.1097005698486555 ENGLEECAGEPLSADPEAR Unmodified 2042.8851 0.88511276 4299 Q92610 ZNF592 Zinc finger protein 592 yes yes 0 0 0 1 0 1 45.238 45.238 3 0.056264 12395 20230619_1880_Aki_TMTPro18x_K_F1 40.844 24.159 15828 15713 18637 20152 19683 22147 16350 18111 23645 21912 22415 25694 26327 25811 15288 29309 28150 24624 14677 14412 18720 20007 20283 22151 16917 18883 23635 22070 23230 25916 26258 26778 16526 29096 26785 23451 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56368000 7083 4299 6700 13469 10841 10841 1 9606 Homo sapiens -0.09461439057031384 ENGTVTAANASTLNDGAAALVLMTADAAK Unmodified 2760.36 0.35998743 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHJ0;A0A5F9ZHD4;A0A5F9ZI66 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 7 0 1 64.305 64.334 3 9.2911E-50 19799 20230619_1887_Aki_TMTPro18x_K_F7 220.13 204.62 18249 14540 20038 19286 17368 19684 18756 24506 23029 24871 27152 27698 32356 22824 29198 31563 29556 34565 16885 13352 20160 19101 18294 19980 18991 24692 23395 25186 27895 27838 32672 24192 29780 31735 28310 32780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131750000 7084 1208 6701 13470 10842 10842 1 9606 Homo sapiens 0.05022183508299349 ENIAEWK Unmodified 888.43413 0.43413207 2257 B2R860;P11908;A0A140VK41;P11908-2;D3YTJ7;H7C540 PRPS2 Ribose-phosphate pyrophosphokinase 2 yes no 0 0 0 4 0 1 50.323 50.354 2 0.040066 14104 20230619_1883_Aki_TMTPro18x_K_F4 90.709 5.9657 161160 116700 149420 145460 191470 230360 180090 181690 269740 190740 235960 209890 225890 183860 227340 179190 240130 223040 148820 107130 153400 145630 195600 225310 184950 189140 268060 193100 243050 211370 230890 190380 231570 182780 229510 211440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116490000 7085 2257 6702 13471 10843 10843 1 9606 Homo sapiens -0.014547635450071539 ENIASVLENYHTESK Unmodified 1732.8268 0.82679325 1183 A0A140VJL0;Q6NVY1;Q6NVY1-2;B9A058;F8W8A6 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes no 0 0 0 5 0 1 53.931 54 3 0.0023124 15472 20230619_1885_Aki_TMTPro18x_K_F5 77.746 66.484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7086 1183 6703 13472 10844 10844 1 9606 Homo sapiens -0.010307078493269728 ENIEEFAMGPEEAVK Unmodified 1691.7713 0.7712522 4114 Q6NXE6-2;Q6NXE6;F5H4P3;F5GWV0;F5GZP0;F5H3X1;F5H052;F5H2X2;F5H2K4 ARMC6 Armadillo repeat-containing protein 6 yes no 0 0 0 2 0.816 1 1 1 59.912 59.926 3 1.4851E-05 18591 20230619_1881_Aki_TMTPro18x_K_F2 109.35 93.76 49891 38438 43197 45039 39212 42088 48191 45244 58845 55681 51784 46885 53508 52692 50319 53712 58180 61341 46065 35257 44388 44921 41307 42872 48393 46291 59067 55468 53507 48199 54464 54211 51677 54380 55612 58169 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59618000 7087 4114 6704 13473;13474;13475 10845;10846 10845 2 9606 Homo sapiens -0.04696257361297285 ENIHYQR Unmodified 958.46208 0.46207815 120 A0A024R104;Q12860-2;Q12860;Q12860-3 CNTN1 Contactin-1 yes no 0 0 0 3 0.816 1 1 1 28.412 28.498 3 0.001768 5043 20230619_1882_Aki_TMTPro18x_K_F3 127.84 104.42 45166 41077 56501 48314 32373 30894 35102 37115 38518 44845 76657 77449 53728 60433 70658 30598 78474 74957 41879 37655 56016 48011 35543 32740 35442 37744 40507 45868 75881 76497 56451 61299 71754 33850 74983 70737 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52589000 7088 120 6705 13476;13477;13478 10847;10848 10847 2 9606 Homo sapiens -0.018814405649095534 ENILEEFSK Unmodified 1107.5448 0.54480473 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PEX7;B4DMD1;A0A6Q8PHG0 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 4 1.22 1 2 2 2 1 60.915 60.944 2;3 4.9145E-05 18681 20230619_1883_Aki_TMTPro18x_K_F4 182.16 112.33 471470 419770 462680 529400 479360 567470 522400 553100 672710 593580 608080 594440 605020 545370 585250 794960 349440 680310 436130 385090 471440 526060 498300 570500 528940 567050 674050 597950 626710 602310 616540 577060 583830 787780 338910 646160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1753299999.9999998 7089 3254 6706 13479;13480;13481;13482;13483;13484;13485;13486 10849;10850;10851 10850 3 9606 Homo sapiens -0.00466588347421748 ENINDEPVDMSAR Oxidation (M) 1504.6464 0.64638604 1158 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RR34;A0A0U1RRK3 GATAD2B Transcriptional repressor p66-beta yes no 0 1 0 1 0 1 37.402 37.402 2 0.029009 8963 20230619_1880_Aki_TMTPro18x_K_F1 65.842 59.309 18815 17882 18840 22014 22751 25859 20715 22421 28824 23877 26745 27239 27952 20723 25338 30661 25986 24139 17416 16398 19214 21936 23288 25777 21259 23179 28811 24165 27591 27292 28345 22116 25877 30273 24844 23003 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24069000 7090 1158 6707 13487 10852 10852 707 1 9606 Homo sapiens -0.08575129777841539 ENINDEPVDMSAR Unmodified 1488.6515 0.65147142 1158 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RR34;A0A0U1RRK3 GATAD2B Transcriptional repressor p66-beta yes no 0 0 0 1 0 1 43.092 43.092 2 4.2428E-11 11481 20230619_1880_Aki_TMTPro18x_K_F1 230.81 213.79 37383 29184 30826 34936 36698 47486 40415 38172 48691 45302 51000 45250 52592 39229 36008 55115 52262 48426 34507 26772 31985 34964 37836 46834 40779 39827 49214 45418 52220 45778 52812 41520 37910 54697 49820 46080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56968000 7091 1158 6707 13488 10853 10853 1 9606 Homo sapiens -0.07330825915232708 ENISEWR Unmodified 932.43519 0.4351947 3683 Q53FW2;P60891;B1ALA9;A0A2R8Y7H4;P60891-2;A0A6Q8PGP2;A0A6Q8PHI4;A0A6Q8PG13;A0A6Q8PGX9 PRPS1 Ribose-phosphate pyrophosphokinase 1 yes no 0 0 0 3 0 1 42.927 42.993 2 0.0073877 10911 20230619_1882_Aki_TMTPro18x_K_F3 125.58 86.778 103690 112900 120620 111070 134940 152710 108670 121070 211420 148230 171480 135660 152140 128830 149300 136470 163470 146010 96208 103280 121260 112940 138540 150600 114290 126520 207750 148180 176670 138150 155780 133570 152570 137610 156150 138650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114330000 7092 3683 6708 13489 10854 10854 1 9606 Homo sapiens -0.03372549176094708 ENIVEAIIHSPELIR Unmodified 1731.9519 0.95193418 3354 O95373;E9PLB2 IPO7 Importin-7 yes no 0 0 0 6 0 1 63.037 63.085 3 8.3102E-20 19545 20230619_1886_Aki_TMTPro18x_K_F6 216.98 165.97 73227 66865 68519 73315 58886 78507 70356 73162 89791 87342 84733 84145 92997 81548 84906 106530 89162 105210 67724 61254 69893 73601 62386 78861 70899 75485 90187 87437 87530 85519 94289 85522 86844 106510 85379 99886 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81525000 7093 3354 6709 13490 10855 10855 1 9606 Homo sapiens 0.11523629077714759 ENKPYALNSEK Unmodified 1291.6408 0.64083038 3446 P13521;C9JQI2 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 1 7 0 1 41.547 41.618 3 0.00020084 9901 20230619_1887_Aki_TMTPro18x_K_F7 115.69 83.415 149280 117660 154320 203200 99986 101460 230660 215260 258080 193380 247920 209630 192480 178420 200330 185500 243390 158230 138040 108400 155900 196790 111530 112820 225730 211610 260430 197090 252170 211160 198730 185320 205840 184880 231870 150890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82221000 7094 3446 6710 13491 10856 10856 1 9606 Homo sapiens 0.006675594926264239 ENLAESSKPTAGGSR Unmodified 1502.7325 0.73249893 3607 P49454 CENPF Centromere protein F yes yes 0 0 1 5 0 1 36.148 36.239 3 0.00041466 8006 20230619_1885_Aki_TMTPro18x_K_F5 90.453 70.072 24704 17639 24709 24235 23862 31217 26296 26923 33898 28232 34982 30116 38956 30869 24981 22473 34840 29325 22825 16211 25090 24019 24969 30919 26615 27831 34121 28542 35958 30513 38954 31397 26173 23120 33201 27801 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29542000 7095 3607 6711 13492 10857 10857 1 9606 Homo sapiens 0.0012419811916970502 ENLAQAVEHR Unmodified 1165.584 0.5839842 1791 Q14789-2;A0A8Q3SHP0;Q14789;Q14789-3;Q14789-4;A0A8J9C4H3;E7EU81;A0A8Q3WKE2;A0A8Q3SHI9;C9J8Q0;A0A8Q3SHH2;A0A8Q3WK92;A0A8Q3WKA7;H0Y867;A0A8Q3SHQ4;A0A8Q3WLC9;A0A8Q3SHQ5;H7C5I7;A0A8Q3SHM0;A0A8Q3SHH5;A0A8Q3SHQ9;Q6PG47 GOLGB1 Golgin subfamily B member 1 yes no 0 0 0 3 0 1 37.978 38.031 3 0.0011673 8773 20230619_1882_Aki_TMTPro18x_K_F3 88.338 68.008 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7096 1791 6712 13493 10858 10858 1 9606 Homo sapiens 0.007815567268153245 ENLATVEGNFASIDER Unmodified 1763.8326 0.83260691 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4H4;A0A7I2V4Y9;B3KTX4;A8K8J9;H0YI98 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 0 0 2 0.816 1 1 1 57.056 57.073 3 2.0104999999999998E-19 17408 20230619_1881_Aki_TMTPro18x_K_F2 206.28 191.81 60565 55460 68024 65567 74644 77989 76870 65547 84762 68121 73091 68199 75145 65140 78116 81722 76917 77843 56102 50841 68564 65558 77012 77658 77597 67927 85397 68767 75621 69179 76782 68163 79336 81633 73611 73973 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 601150000 7097 1406 6713 13494;13495;13496 10859 10859 1 9606 Homo sapiens -0.01875609337662354 ENLDRDIALLK Unmodified 1298.7194 0.71941505 2771 CON__P00735 yes yes 0 0 1 5 0.816 1 1 1 54.517 54.57 3 0.0002762 15617 20230619_1885_Aki_TMTPro18x_K_F5 110.92 69.639 + 288920 250390 316170 360030 510220 559410 429100 400190 752400 1417200 2493100 3462000 1016600 1777900 2262700 1419200 1740400 2475800 267470 230060 322130 356840 512980 547020 448310 447930 816480 1437600 2419200 3358600 1148300 1865700 2245900 1494200 1675400 2337600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2172300000 7098 2771 6714 13497;13498;13499 10860;10861;10862 10861 3 9606 Homo sapiens 0.0820041179774762 ENLEDEYEPR Unmodified 1292.5521 0.55207495 1582 A8K7A0;A0A5F9ZHU7;P49643;A0A024RD43;A0A5F9ZHR0;A0A024RD63;P49643-2 PRIM2;PRIM2A DNA primase large subunit yes no 0 0 0 1 0 1 43.114 43.114 2 0.00021384 11504 20230619_1880_Aki_TMTPro18x_K_F1 137.17 99.446 28725 21525 24875 27548 28098 27366 27828 27841 35328 34514 42767 33195 43420 32325 29049 36855 38161 30904 26518 19763 25648 27322 28916 27709 28314 28589 35852 34491 43466 33769 43577 33626 30334 36613 36374 29442 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43499000 7099 1582 6715 13500 10863 10863 1 9606 Homo sapiens -0.08249900537680332 ENLEEEAIIMK Oxidation (M) 1333.6435 0.64353249 4639 Q9P0J0;Q9P0J0-2;B4DEZ3;K7EJE1;E7ENQ6;B4DQP1 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes no 0 1 0 2 0.816 1 1 1 52.89 52.921 3 0.0006948 15708 20230619_1881_Aki_TMTPro18x_K_F2 91.784 73.822 56273 44187 55692 56261 66454 67653 66069 71185 83823 50757 51536 48856 52127 46084 60647 49502 55532 54483 52017 40560 56783 55986 68145 67629 67173 71904 83007 52392 54428 49615 53610 47815 61174 50009 53174 51700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67921000 7100 4639 6716 13501;13502;13503 10864 10864 2839 1 9606 Homo sapiens -0.009943531647195414 ENLEQAFEVAER Unmodified 1433.6787 0.67867245 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;E9PNZ4;A0A5F9ZGX0;E9PLY5;Q6ZSD7;E9PLY0;Q13696 MACF1;ACF7 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 0 1.5 0.5 1 1 56.032 56.041 2 3.6725E-05 17034 20230619_1881_Aki_TMTPro18x_K_F2 142.83 112.58 58716 43112 46066 62744 53162 63439 60690 63072 85167 73660 73607 94399 99069 96906 58796 126550 112730 149160 54161 39643 48065 61716 54973 64057 61491 64756 84915 74557 77264 95007 98550 101420 63861 127730 107590 141300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49928000 7101 1566 6717 13504;13505 10865 10865 1 9606 Homo sapiens -0.020819743125002788 ENLISALEEAK Unmodified 1215.6347 0.63468237 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 4 0 1 62.285 62.29 3 7.412E-05 19324 20230619_1883_Aki_TMTPro18x_K_F4 123.84 95.11 23338 18453 21789 27619 21017 25430 25503 25276 31542 28476 27354 30273 31637 28592 31211 37306 32021 35242 21564 16969 22290 27092 22041 25863 25637 25929 31624 28672 28476 30601 32148 29998 31825 37215 30652 33483 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58278000 7102 3488 6718 13506 10866 10866 1 9606 Homo sapiens 0.03549041261135244 ENLLDFIK Unmodified 990.5386 0.53859714 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;Q96C96;A0A7P0Z4J0;B4DJS0;A0A7P0Z4S2 P4HB Protein disulfide-isomerase yes no 0 0 0 6.5 0.5 1 1 63.042 63.082 3 0.00039177 19219 20230619_1887_Aki_TMTPro18x_K_F7 143.45 88.675 575470 494620 530800 586130 587530 685430 666260 660280 939840 628030 637230 564070 587240 486390 696870 625470 586440 626970 531950 453540 544220 585750 608760 684920 675280 675340 928820 635180 665540 573250 606070 511800 700240 626620 562450 595340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 711270000 7103 537 6719 13507;13508 10867;10868 10868 2 9606 Homo sapiens 0.042949382117285495 ENLSAAFSR Unmodified 993.48796 0.48795855 3455 P15170-2;P15170-3 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 0 0 0 6.5 0.5 1 1 45.2 45.287 2 0.00035522 11796 20230619_1886_Aki_TMTPro18x_K_F6 142 137.01 806410 619580 785380 874540 836990 958500 903170 842380 1124100 1079900 1101800 1014800 1119500 899110 991850 1212100 1187000 1181700 745220 569410 800950 862940 867700 959960 913520 875140 1131800 1077000 1131500 1029800 1135800 948150 1022800 1210600 1133800 1122700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1122900000 7104 3455 6720 13509;13510 10869;10870 10869 2 9606 Homo sapiens -0.009045911132830042 ENLSYDLVPLK Unmodified 1289.6867 0.68671794 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;A0A0A0MSM0;B4DZB4;R4GN69 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 6 0.816 1 1 1 60.791 60.841 3 0.00017507 18134 20230619_1887_Aki_TMTPro18x_K_F7 113.38 90.846 196860 163670 169420 220060 174990 210740 179620 196490 248250 254880 203430 176270 235630 179100 188410 249910 195130 196730 181840 150290 174770 217360 181780 213430 182990 203240 247460 252110 211990 182690 237080 188500 193130 246850 186640 187410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 308820000 7105 769 6721 13511;13512;13513 10871;10872 10872 2 9606 Homo sapiens 0.053462046749018555 ENLTELSGGQR Unmodified 1202.5891 0.58912916 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;B3KM27;A0A0C4DGE5;Q13497 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 3 0 1 42.015 42.078 2 6.0867E-17 10477 20230619_1882_Aki_TMTPro18x_K_F3 269.33 207.65 106280 84517 87180 97962 105770 113190 111390 111580 155360 128820 136680 132560 144480 116740 105100 146380 138580 134530 98108 77503 90494 98040 108640 113290 113300 114550 154960 129450 141350 133910 145330 122520 109640 145840 132240 127910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166050000 7106 128 6722 13514 10873 10873 1 9606 Homo sapiens -0.004061842012333727 ENLVDGF Unmodified 792.36538 0.3653838 1299 A0A1U9X839;A0A1U9X830;P18615;P18615-3;H9ZYJ1;P18615-4 NELFE;NELF-E Negative elongation factor E yes no 0 0 0 2 0 1 59.943 59.954 2 0.0075915 18604 20230619_1881_Aki_TMTPro18x_K_F2 123.99 107.83 24228 18961 23400 23866 25480 28191 26534 27148 40366 32995 30987 27082 29991 29619 28933 32604 31287 34182 22391 17403 23874 23758 26358 28155 27112 27951 39950 32881 32160 27858 30625 30620 29591 32795 29932 32439 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25701000 7107 1299 6723 13515 10874 10874 1 9606 Homo sapiens -0.03910427844698461 ENLVFLAQK Unmodified 1060.5917 0.59169534 1823 A0A8V8TP16;P51692;A0A8V8TM91;A0A8V8TMR0;A0A8V8TP21;A0A8V8TP00;A0A8V8TM84;Q59H39;A0A8V8TMP4;P42229;A0A384N5W4;A8K6I5;A0A7I2YQY3;Q8WWS9;K7EK35;A0A7I2V380;Q59GY7;A0A7I2YQF1;K7EIF9;P42229-2 STAT5B;STAT5A Signal transducer and activator of transcription 5B;Signal transducer and activator of transcription;Signal transducer and activator of transcription 5A yes no 0 0 0 8 0 1 57.669 57.721 3 0.061446 16889 20230619_1888_Aki_TMTPro18x_K_F8 44.639 28.415 28720 24326 27002 26420 29750 30461 34375 33991 39798 33307 30047 27476 39678 30905 33546 39364 27435 34131 26549 22288 27612 26583 30796 30590 34548 34451 39848 33537 31693 28303 39873 32227 33918 39112 26355 32448 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42596000 7108 1823 6724 13516 10875 10875 1 9606 Homo sapiens 0.06382315994369492 ENLVRPGIDHLGR Unmodified 1474.8005 0.80045934 960 B7Z876;B7Z3A4;A0A0A0MT33;Q9UPN6;Q9UPN6-2;Q9H8B2;Q8NDE9;Q59EY7 SCAF8;DKFZp434J2412 Protein SCAF8 yes no 0 0 1 7.5 0.5 1 1 40.157 40.184 4 5.9057E-11 9312 20230619_1887_Aki_TMTPro18x_K_F7 187.63 162.2 93222 87196 92939 92246 95935 114580 95703 107190 122400 104670 98944 97788 102030 85998 110260 116040 112190 102300 86275 79848 94478 93086 99518 114010 97371 109890 122230 105740 102780 99223 104440 90677 112110 115350 107250 97350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 89028000 7109 960 6725 13517;13518 10876;10877 10876 2 9606 Homo sapiens 0.08205112560517591 ENMAYTVECLR Oxidation (M) 1400.6064 0.60643548 3492 P22695;H3BRG4;H3BSJ9;H3BP04 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 1 0 3 0 1 43.972 44.042 2 0.00016392 11410 20230619_1882_Aki_TMTPro18x_K_F3 127.93 108.83 37822 35459 40827 47578 61824 40881 55472 48546 59766 37962 50375 38088 46120 40746 46565 47127 45226 45023 35028 32546 41552 46961 62152 42093 56397 48818 60190 38980 51866 38834 47237 42273 47273 47141 43283 42786 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52291000 7110 3492 6726 13519 10878 10878 2157 1 9606 Homo sapiens -0.07784347982124018 ENMAYTVECLR Unmodified 1384.6115 0.61152086 3492 P22695;H3BRG4;H3BSJ9;H3BP04 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 4.5 0.5 1 1 50.333 50.387 2 7.9336E-12 14172 20230619_1883_Aki_TMTPro18x_K_F4 222.34 180.9 98371 80271 96971 110780 101130 118230 118610 134890 162770 107400 111340 119110 124920 107780 115260 123260 118060 132240 90949 73735 98790 109450 105310 119310 119930 135870 161090 110460 117300 120020 126640 112380 117570 124100 113030 125450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117590000 7111 3492 6726 13520;13521 10879 10879 1 9606 Homo sapiens -0.0654004411949245 ENMEAISPLK Oxidation (M) 1146.5591 0.55907458 3368 Q6FI97;Q53FS0;O96019;O96019-2;H7C5S0;C9JQT2 BAF53A;ACTL6A Actin-like protein 6A yes no 0 1 0 3.33 0.471 2 1 45.861 45.926 2;3 0.0003867 12282 20230619_1882_Aki_TMTPro18x_K_F3 101.93 79.883 82872 63571 68932 83219 95801 103800 85264 84552 112830 93487 107120 107150 104260 82941 93793 109180 109340 112250 76493 58375 71668 82651 97171 102960 87412 87953 113100 94468 110030 107360 105980 87763 96504 109420 104490 106570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115140000 7112 3368 6727 13522;13523;13524 10880;10881 10880 1969 2 9606 Homo sapiens -0.00834259190787634 ENMEAISPLK Unmodified 1130.5642 0.56415996 3368 Q6FI97;Q53FS0;O96019;O96019-2;H7C5S0;C9JQT2 BAF53A;ACTL6A Actin-like protein 6A yes no 0 0 0 5 0 1 51.661 51.737 2 0.00038515 14523 20230619_1885_Aki_TMTPro18x_K_F5 146.71 104.6 81644 64162 73960 72965 81911 92920 81955 78111 103050 103750 108310 98577 120080 92097 96981 106460 102280 111200 75417 58830 75884 73242 84527 92122 83287 81497 104030 103350 111300 100110 121000 96042 99370 106990 97871 105530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55231000 7113 3368 6727 13525 10882 10882 1 9606 Homo sapiens 0.00410044671821197 ENMEIEERER Oxidation (M) 1349.5881 0.58814288 940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 SMARCA1 Probable global transcription activator SNF2L1 yes no 0 1 1 1 0 1 28.871 28.871 3 0.074808 5561 20230619_1880_Aki_TMTPro18x_K_F1 47.894 40.529 7027.9 7177 5585 10081 13518 9880.6 9476.7 9797.2 11338 8194.2 8064.8 6576.9 7514.4 6091.1 8498.9 7020.8 11600 7391.5 6497.5 6588.9 5934 9929 13271 10016 9839 9972.8 11313 8323.7 8397.2 6738.7 7737.7 6352.7 8785.5 7066.3 11040 7031.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3780200 7114 940 6728 13526 10883 10883 531 1 9606 Homo sapiens -0.07266766632483268 ENMTLQPK Oxidation (M) 975.46953 0.46953129 3433;1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 1 0 5 0 1 38.03 38.123 2 0.035601 8769 20230619_1885_Aki_TMTPro18x_K_F5 71.501 14.22 15610 12411 20783 18794 15952 19808 17636 18467 22813 20563 21414 17697 19947 14591 18425 19646 18970 20746 14471 11414 20598 18467 17008 19909 17859 19012 22884 20586 21944 18003 20315 15439 18800 19718 18157 19686 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13511000 7115 1843;3433 6729 13527 10884 10884 1178 1 9606 Homo sapiens -0.019184690794986636 ENMTLQPK Unmodified 959.47462 0.47461667 3433;1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 0 0 6 0 1 43.767 43.859 2 1.3854E-05 11169 20230619_1886_Aki_TMTPro18x_K_F6 144.12 44.055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7116 1843;3433 6729 13528 10885 10885 1 9606 Homo sapiens -0.00674165216878464 ENNIDHITK Unmodified 1082.5356 0.53563702 556 A0A2R8Y544;B2RAA8;A0A024R949;Q9BR61 ACBD6 Acyl-CoA-binding domain-containing protein 6 yes no 0 0 0 4 0 1 38.128 38.17 3 0.067258 8788 20230619_1883_Aki_TMTPro18x_K_F4 53.569 37.371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7117 556 6730 13529 10886 10886 1 9606 Homo sapiens -0.0023293691310755094 ENNVDAVHPGYGFLSER Unmodified 1902.886 0.88603946 332 A0A024R5C5;P11498;A0A494C101;A0A494C0T2;A0A494C016;P11498-2;E9PRE7 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 4 0.816 1 1 1 48.147 48.213 3 2.453E-18 13106 20230619_1883_Aki_TMTPro18x_K_F4 174.65 157.97 217930 185570 218710 229610 241080 247510 227120 213560 238230 272120 293710 264220 286850 258890 310070 298070 303350 334320 201570 170230 222470 228480 248100 248230 230240 222150 244460 271640 298330 268540 294140 269330 314460 300970 290520 317040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 418440000 7118 332 6731 13530;13531;13532 10887;10888;10889 10888 3 9606 Homo sapiens -0.0292881183515874 ENNVVFNR Unmodified 990.48829 0.4882929 3189 M0QXU7;Q9UPE4;Q53G69;O43615 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 yes no 0 0 0 4.5 0.5 1 1 39.037 39.104 2 0.0023196 9185 20230619_1885_Aki_TMTPro18x_K_F5 128.61 98.422 62342 48405 57326 63092 79014 77609 71482 72561 90152 72102 92002 90891 85350 69959 76721 82349 91003 91881 57590 44444 59001 62686 80118 77277 73081 74461 90782 73492 93992 90729 86900 73522 78986 83074 86939 87165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172340000 7119 3189 6732 13533;13534 10890 10890 1 9606 Homo sapiens -0.007331713934263462 ENNYLNQHVNR Unmodified 1399.6593 0.65927441 2039 A8K4B4;Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7 NUSAP1 Nucleolar and spindle-associated protein 1 yes no 0 0 0 5.5 0.5 1 1 33.632 33.695 3 6.4986E-24 7039 20230619_1885_Aki_TMTPro18x_K_F5 229.16 206.04 45186 27562 38976 39104 38235 41622 36677 37664 45039 38705 44881 38375 45587 34062 38755 41396 44177 35401 41668 25358 40090 38569 39759 41799 37351 38783 45384 39067 46032 38858 46148 35679 39839 41145 42155 33720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85765000 7120 2039 6733 13535;13536 10891;10892 10891 2 9606 Homo sapiens -0.024568858127850035 ENPDIVNQSQQAQAR Unmodified 1696.8129 0.81287452 2352 Q59HA2;B3KMG5;Q6IBL8;Q53ET9;O95376 ARIH2 E3 ubiquitin-protein ligase ARIH2 yes no 0 0 0 3 0 1 37.346 37.4 3 3.2114E-19 8542 20230619_1882_Aki_TMTPro18x_K_F3 181.26 167.51 30673 22216 27167 26108 28941 28395 28995 33755 41314 36355 38415 42374 39425 35057 35912 40864 44421 37509 28315 20383 27903 26095 29926 28675 29625 34164 41265 36786 39616 42484 40060 36691 37073 40775 42372 35687 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40174000 7121 2352 6734 13537 10893 10893 1 9606 Homo sapiens -0.007659405577442158 ENPDIYK Unmodified 877.41815 0.41814765 638 B4DMD3;B4DY34;A0A024RAW9;Q9Y2W2;F5H5G4 WBP11 WW domain-binding protein 11 yes no 0 0 0 3 0 1 42.747 42.812 2 0.047598 10847 20230619_1882_Aki_TMTPro18x_K_F3 90.657 40.617 104440 57583 108700 124380 141050 168910 138240 138720 176260 145040 173070 173580 169740 150390 142270 96565 189630 191840 96409 53325 110670 120530 144020 166560 140700 143960 177160 147210 177530 173970 172100 153180 147500 103400 181000 181200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188730000 7122 638 6735 13538 10894 10894 1 9606 Homo sapiens -0.025464697818961213 ENPDKEEFR Unmodified 1162.5255 0.52546627 403 P51003;A0A024R6M3;B4DHB8;B4DYF4;G3XAH6;A0A024R6J7 PAPOLA Poly(A) polymerase alpha yes no 0 0 1 2.5 0.5 1 1 36.662 36.718 3 0.0046536 8371 20230619_1881_Aki_TMTPro18x_K_F2 69.786 55.667 95252 70560 90653 111960 118290 125640 109890 106880 145000 132280 141090 125430 133340 115030 109040 139240 156110 121800 87990 64948 93010 109740 120490 125550 112340 111180 145550 132180 144450 127350 135240 120250 114060 138480 148670 116000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149510000 7123 403 6736 13539;13540 10895 10895 1 9606 Homo sapiens -0.04929544638321204 ENPFQNLK Unmodified 988.49779 0.49779495 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B3KVT9 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 8 0 1 52.66 52.734 2 0.0063779 14726 20230619_1888_Aki_TMTPro18x_K_F8 101.25 42.657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7124 1984 6737 13541 10896 10896 1 9606 Homo sapiens 0.0030859689209137287 ENPGFDFSGAEISGNYTK Unmodified 1931.8537 0.85373628 2875 E5RFP0;Q8WVJ2 NUDCD2 NudC domain-containing protein 2 yes no 0 0 0 5 0.816 1 1 1 58.663 58.705 3 1.3991E-18 17396 20230619_1885_Aki_TMTPro18x_K_F5 172.95 155.04 111700 93483 108700 116520 101120 116590 109820 114220 123840 142370 146510 141100 149130 123510 142430 160160 157660 162610 103270 85770 110600 115780 105920 117830 110730 117600 126370 142300 149340 142750 151780 129950 145890 160440 150740 154400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 342800000 7125 2875 6738 13542;13543;13544 10897;10898;10899 10898 3 9606 Homo sapiens -0.07491644028777955 ENPHDAVVFHPK Unmodified 1388.6837 0.68369824 1501 A0A8I5KXV4;F5H345;A0A3B3IRR1;A0A3F2YNY7;P08397-4;P08397-3;P08397-2;P08397;A0A3B3IU56;F5GY90;A0A1W2PNU5;A0A3B3IU34;F5H0P4;F5H226 HMBS Porphobilinogen deaminase yes no 0 0 0 4.5 0.5 1 1 38.309 38.377 4 0.0017801 8892 20230619_1883_Aki_TMTPro18x_K_F4 86.291 59.176 34605 35621 35017 35061 36362 37865 42123 39829 45622 50916 59043 50732 52211 46385 57754 52776 59805 49207 32053 32590 35559 35522 37795 38152 42252 40850 46816 50848 59605 51390 53775 48315 58713 52758 57128 46814 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93608000 7126 1501 6739 13545;13546 10900 10900 1 9606 Homo sapiens 0.004903743407567163 ENPLDSSVEFMQIWR Unmodified 1849.8669 0.86688392 3326 O76038;A0A994J4C2 SCGN Secretagogin yes no 0 0 0 6.5 0.5 1 1 64.743 64.779 2 2.163E-10 20002 20230619_1887_Aki_TMTPro18x_K_F7 194.3 163.11 14682 12015 14344 8190.4 5623 7980.5 11435 12719 14936 37238 31379 38374 44049 33633 36713 51009 41841 49650 13573 10974 14431 8620.6 6707 8212.1 11328 13305 15776 36310 32021 38728 44178 35786 37826 50853 40038 47143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61024000 7127 3326 6740 13547;13548 10901 10901 1 9606 Homo sapiens -0.024054844504235007 ENPLLPEEEEQR Unmodified 1481.6998 0.69980182 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;H0YCH5;H0YEC5;H0YD77 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 1 0 1 46.716 46.716 2 3.0066E-10 12975 20230619_1880_Aki_TMTPro18x_K_F1 192.6 166.15 57124 46048 47290 56664 60835 62724 62768 60645 65142 66401 62813 53068 68452 50345 64595 60624 54859 47348 52741 42249 49116 56423 62151 62934 63235 62248 66177 66393 64748 54410 69427 52595 65190 60040 52531 45139 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98191000 7128 3752 6741 13549 10902 10902 1 9606 Homo sapiens -0.02178009003682746 ENPLQFK Unmodified 874.45487 0.45486751 3456;2184 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;J7M2B1;P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;Q05CU6;Q6PKD3;P35241-3;E9PNV3;E9PQ82;A0A2R8Y5P0 EZR;HEL-S-105;EZR-ROS1;RDX Ezrin;Tyrosine-protein kinase receptor;Radixin no no 0 0 0 6.5 0.5 1 1 50.831 50.909 2 0.013784 14280 20230619_1886_Aki_TMTPro18x_K_F6 113.5 50.212 1121900 914450 948290 1097800 1141700 1256500 1122300 1171200 1328200 1494100 1452200 1402600 1739400 1325200 1072100 1823100 1711300 1546000 1036000 838770 981520 1095600 1170800 1256700 1139300 1210600 1347800 1489800 1495400 1426200 1733900 1396300 1141300 1806200 1630000 1472000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1193000000 7129 3456;2184 6742 13550;13551 10903;10904 10903 2 9606 Homo sapiens 0.012618268346727746 ENPPMKPDFSQLQR Unmodified 1685.8195 0.8195398 448 A0A024R7G4;Q9NVP2 ASF1B Histone chaperone ASF1B yes no 0 0 1 8 0 1 48.926 48.992 3 7.8261E-09 13102 20230619_1888_Aki_TMTPro18x_K_F8 161.04 131.94 180020 140790 171090 173030 111810 162740 160020 152760 180230 204120 192000 166240 212000 158500 154340 210560 177950 162140 166350 129190 173700 171990 122470 165050 159270 158170 183050 202370 197070 170310 212840 166560 159570 207900 169920 154580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85821000 7130 448 6743 13552 10905 10905 1 9606 Homo sapiens 0.004062810692403218 ENPPVEDSSDEDDKR Unmodified 1730.7231 0.72311604 4269 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 0 0 1 1 0 1 35.474 35.474 3 2.8574E-05 8199 20230619_1880_Aki_TMTPro18x_K_F1 101.36 83.261 8506.6 4590 9413.4 8122.4 9686.6 10918 9710 10276 11279 10067 12939 14884 13226 9648 11689 7819.3 11479 11263 7856 4237.7 9483.4 7946.9 10041 10806 9843.4 10535 11462 10329 13222 14696 13401 10036 11879 8094.9 10983 10662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15290000 7131 4269 6744 13553 10906 10906 1 9606 Homo sapiens -0.11301659747687154 ENPVLDVVSNPEQTAGEER Unmodified 2081.9865 0.98654137 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B7Z3E7;A8KA50;C9JXV0 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 1 0 1 54.362 54.362 3 0.00011337 16130 20230619_1880_Aki_TMTPro18x_K_F1 78.975 69.692 31153 24901 27253 26897 29597 35222 33797 30218 39150 24911 22653 22554 23615 22513 27476 23358 25183 23432 28772 22819 28049 27119 30705 34870 33976 31080 38884 25426 24074 23003 24278 23262 27721 23481 24105 22262 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37542000 7132 1984 6745 13554 10907 10907 1 9606 Homo sapiens -0.011172443627401663 ENPVYEK Unmodified 877.41815 0.41814765 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9;A0A2R8Y4A2;Q8WYP1 RPL5 60S ribosomal protein L5 yes no 0 0 0 3.5 0.5 1 1 41.147 41.198 2 0.022709 10078 20230619_1882_Aki_TMTPro18x_K_F3 106.04 28.984 394260 197030 492430 514490 714660 773130 533540 690470 617110 463810 716030 771090 662930 618660 699790 283270 760270 710140 364430 183230 495470 496160 719600 759500 551600 704510 627230 490360 728160 762950 680290 625660 711860 315440 726490 670150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 849200000 7133 1916 6746 13555;13556 10908;10909 10908 2 9606 Homo sapiens -0.0254646978190749 ENPYYDSR Unmodified 1042.4356 0.43558863 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 2 0.816 1 1 1 36.235 36.273 2 0.00015326 8155 20230619_1881_Aki_TMTPro18x_K_F2 172.94 43.518 324780 236800 277830 312680 370490 383770 336690 356350 549430 433850 479510 447880 483210 403450 386040 450470 527750 473640 299750 217510 287700 310380 376940 382080 347910 367880 544550 435090 494990 452610 488540 420210 402410 453060 503200 449820 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 822020000 7134 826 6747 13557;13558;13559 10910;10911;10912;10913 10912 4 9606 Homo sapiens -0.0839317424690762 ENQELMK Unmodified 890.41677 0.41676744 2830 D3DVC4;P48681 NES Nestin yes no 0 0 0 3 0 1 41.321 41.38 2 0.0055357 10202 20230619_1882_Aki_TMTPro18x_K_F3 140.09 61.474 48779 27923 48683 49885 70566 83009 73351 90559 93905 74835 82874 103430 101980 81470 82922 44869 107290 93437 45019 25775 49821 48986 71707 81522 74432 91473 94021 77344 86508 102780 102550 82911 85768 48539 102330 88283 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41042000 7135 2830 6748 13560 10914 10914 1 9606 Homo sapiens -0.03282427142301003 ENQELNAHNQELNNR Unmodified 1821.8354 0.83540087 1541 J3KSW8;U6FSN9;A0A494BZV2;Q6WCQ1-3;Q6WCQ1;Q6WCQ1-2;B9EGI2;Q5ZEZ6;H0Y7E2;Q9Y6X7;H0Y2S9 MPRIP;Mprip-Ntrk1 fusion gene;M-RIP;KIAA0864 Tyrosine-protein kinase receptor;Myosin phosphatase Rho-interacting protein yes no 0 0 0 1.5 0.5 1 1 32.334 32.364 3 3.6340000000000003E-25 6642 20230619_1881_Aki_TMTPro18x_K_F2 222.45 205.23 10150 10151 13226 11944 11104 13020 15127 14384 19847 16477 17806 17510 19475 16361 14969 17844 22164 16811 9422 9302.3 13143 11937 11813 13115 15163 14657 19857 16580 18430 17692 19616 16992 15710 17845 21100 15998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46507000 7136 1541 6749 13561;13562 10915 10915 1 9606 Homo sapiens -0.04264341160114782 ENQEPLR Unmodified 884.43519 0.4351947 2830 D3DVC4;P48681 NES Nestin yes no 0 0 0 1 0 1 31.121 31.121 2 0.015435 6433 20230619_1880_Aki_TMTPro18x_K_F1 111.29 37.671 49980 26776 63443 61814 90862 103660 100660 126300 116840 80155 107990 130950 120980 99014 112180 49848 121690 121200 46219 24830 63769 60065 92464 102040 101440 126100 117610 85016 111950 129380 122610 100680 114390 55097 116340 114370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75495000 7137 2830 6750 13563 10916 10916 1 9606 Homo sapiens -0.011645491760873483 ENQGDETQGQQPPQR Unmodified 1710.7558 0.75575357 3745 P67809;H0Y449;A0JLU4;Q2VIK8 YBX1 Nuclease-sensitive element-binding protein 1 yes no 0 0 0 1 0 1 28.662 28.662 3 2.0155000000000003E-25 5441 20230619_1880_Aki_TMTPro18x_K_F1 231.58 213.42 4538 2103.2 5670.5 5139.4 3643.2 9064 5376.8 5267.2 7042.9 6167.2 8248.2 10044 9724.6 10788 6302.4 7996.8 11561 13934 4193.5 1954.2 5639 4983.4 4031.1 8760.1 5375.6 5667.9 7121.9 6311.9 8477.8 10039 9737.4 10952 6768.4 8408.1 11027 13163 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38895000 7138 3745 6751 13564 10917 10917 1 9606 Homo sapiens -0.0711940783414775 ENQGDETQGQQPPQRR Unmodified 1866.8569 0.8568646 3745 P67809;H0Y449;A0JLU4;Q2VIK8 YBX1 Nuclease-sensitive element-binding protein 1 yes no 0 0 1 1 0 1 23.164 23.164 3 7.7434E-06 3818 20230619_1880_Aki_TMTPro18x_K_F1 109.14 98.324 3034.4 2169.7 4072.1 3177.6 7030.3 8710.3 4156.8 5854.6 5247.5 3857.9 7994.3 9589.8 9443 9281.8 5241.1 5869.9 13524 16934 2811.6 1995.4 4089.7 3196.2 6998.5 8316.2 4398.7 6117.2 5387.3 4185.9 8140.4 9461.6 9408 9413.7 5863.5 6567.6 12883 15954 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29480000 7139 3745 6752 13565 10918 10918 1 9606 Homo sapiens -0.0418895613145196 ENQIDPPVVAR Unmodified 1236.6463 0.64625011 2794 CON__Q28107 yes yes 0 0 0 3 0 1 42.547 42.613 2 0.00010082 10706 20230619_1882_Aki_TMTPro18x_K_F3 137.85 94.082 + 41101 35762 46756 45186 65143 85904 60244 55278 91770 73539 121180 159220 95525 93664 114950 67852 107680 128560 38063 32811 47318 45362 66233 83028 61989 59105 92714 75976 122100 155290 99277 97368 115880 72166 103240 121390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59254000 7140 2794 6753 13566 10919 10919 1 9606 Homo sapiens 0.037392830751286965 ENQIPEEAGSSGLGK Unmodified 1514.7213 0.72126554 3053 H0YKX3;Q15004;H0YMA4;A0A0U1RQM0 KIAA0101 PCNA-associated factor yes no 0 0 0 3 0 1 46.131 46.209 3 0.0007234 12396 20230619_1882_Aki_TMTPro18x_K_F3 80.508 61.45 84036 59909 78291 91224 75039 92912 84898 81538 109790 106720 121150 116920 124010 107800 86448 108400 140440 124820 77599 55124 80048 89513 78600 93509 85812 84795 110870 106860 123790 117910 124750 111540 91655 109790 133740 118430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56645000 7141 3053 6754 13567 10920 10920 1 9606 Homo sapiens -0.015506239749583983 ENQTAVDVFR Unmodified 1177.5728 0.57275081 911 C9J931;Q6NZ61;A8K005;A0A090N900;Q15382 RHEB GTP-binding protein Rheb yes no 0 0 0 3 0 1 45.582 45.657 2 5.1905E-07 12144 20230619_1882_Aki_TMTPro18x_K_F3 212.21 125.38 387150 292840 313570 342160 313430 379520 345870 340900 395630 469720 485190 510670 491310 407970 416440 521230 503230 549870 357250 268610 324840 342010 326960 380050 348520 354400 404130 468910 493950 512960 497630 430280 430170 523240 480970 521790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 424060000 7142 911 6755 13568 10921 10921 1 9606 Homo sapiens -0.008932653673355162 ENQWCEEK Unmodified 1121.4448 0.44477311 2881 E5RJR5;E5RI56;P63208 SKP1 S-phase kinase-associated protein 1 yes no 0 0 0 2 0.816 1 1 1 42.118 42.188 2 1.1126E-09 11050 20230619_1880_Aki_TMTPro18x_K_F1 193.1 72.053 246980 177410 229880 228310 264090 310280 266930 270720 380130 318410 304330 268430 347070 268540 236470 256380 388460 281240 228070 162930 235480 227440 272080 306550 272400 280430 377770 317960 317250 274720 347610 276610 250830 259220 369460 267250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 208990000 7143 2881 6756 13569;13570;13571 10922;10923;10924 10922 3 9606 Homo sapiens -0.11109148952891701 ENQWFDVGVIK Unmodified 1333.6667 0.6666512 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4;H7C1C4 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 6.5 0.5 1 1 62.047 62.09 3 0.011823 18753 20230619_1887_Aki_TMTPro18x_K_F7 66.498 43.619 64905 52360 65397 77434 63389 75474 66616 76754 85648 77472 73035 81608 78151 78467 64606 89512 83155 95228 60014 48137 66435 76075 66161 76456 67604 78332 85681 78400 75794 82542 79064 81584 67101 90019 79466 90343 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309160000 7144 1331 6757 13572;13573 10925 10925 1 9606 Homo sapiens 0.013164537349439343 ENSETVVTGSLDDLVK Unmodified 1704.8418 0.84177461 3059 H0YN81;Q9GZS3;H0YMF9;H0YM76;B4E387 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes no 0 0 0 4 0 1 60.052 60.054 3 0.0067524 18374 20230619_1883_Aki_TMTPro18x_K_F4 66.809 47.977 33895 33830 42083 44418 38678 45374 47396 40676 57668 44736 43857 41664 51404 44173 45842 54614 48020 51954 31448 31037 42040 43991 40687 45694 47579 42017 57585 44947 45964 42552 51971 46035 46883 54540 45951 49360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25743000 7145 3059 6758 13574 10926 10926 1 9606 Homo sapiens 0.017547392279766427 ENSKREEEEQQEGGFASPR Unmodified 2205.9887 0.98866663 809 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2;B4E0F9;A0A087WWG9 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 0 0 2 2 0.816 1 1 1 34.822 34.861 4 3.0864E-14 7941 20230619_1880_Aki_TMTPro18x_K_F1 149.53 128.52 28404 25725 31066 25932 24643 28323 26067 31471 25879 33860 41316 36346 38927 31408 32818 35161 32960 31532 26302 23550 31205 26238 26141 28543 26245 31977 27009 34140 41518 36637 39488 32759 33500 35071 31524 29993 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120620000 7146 809 6759 13575;13576;13577 10927 10927 1 9606 Homo sapiens -0.06608815624986164 ENSRPDSSLPETSKK Unmodified 1673.822 0.82204222 632 A0A024RAQ8;Q13426;Q7Z763 XRCC4 DNA repair protein XRCC4 yes no 0 0 2 6 0 1 36.459 36.52 4 0.013305 8145 20230619_1886_Aki_TMTPro18x_K_F6 66.939 52.768 42391 29273 37198 48528 56454 53500 49750 48664 64971 43217 55167 45408 56205 39409 42945 46974 52159 37338 39120 26968 38568 47441 56903 53605 50995 49916 64862 44084 57019 45848 56650 41269 44427 46543 49714 35621 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59072000 7147 632 6760 13578 10928 10928 1 9606 Homo sapiens 0.01208408007869366 ENTEQRAEEIESR Unmodified 1589.7281 0.72814183 1362 A0A2R8Y7R9;Q13136;Q13136-2;H0YDW2;Q59FZ5 PPFIA1 Liprin-alpha-1 yes no 0 0 1 1 0 1 33.073 33.073 3 0.061238 7222 20230619_1880_Aki_TMTPro18x_K_F1 45.825 20.608 13751 11751 11610 13899 16329 16436 14116 13988 14883 11241 12098 9643.2 11389 10342 14959 10050 13100 11774 12703 10775 12054 13890 16521 16377 14382 14387 15001 11469 12506 9895.4 11820 10633 15018 10218 12543 11169 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10919000 7148 1362 6761 13579 10929 10929 1 9606 Homo sapiens -0.04313311094369965 ENTPPALSGTR Unmodified 1141.5728 0.57275081 2856 D6W4Z6;P31350;P31350-2;A0A286YFD6 hCG_23833;RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes no 0 0 0 4 0 1 36.674 36.719 2 4.9086E-06 8205 20230619_1883_Aki_TMTPro18x_K_F4 158.94 111.37 139950 98926 105280 125980 95054 120520 92589 92624 151260 159810 163930 118810 170230 122160 94030 151700 141550 97038 129030 90845 109780 124870 99826 121630 95365 98372 151340 156740 167400 122710 169770 127520 99884 148770 134670 92910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118950000 7149 2856 6762 13580 10930 10930 1 9606 Homo sapiens 0.0076273463266716135 ENTVGLHR Unmodified 924.47773 0.47772821 1879 A0A994J5K1;Q5SXN9;Q10713;Q10713-2 PMPCA Mitochondrial-processing peptidase subunit alpha yes no 0 0 0 5 0 1 29.808 29.884 3 0.0022225 5643 20230619_1885_Aki_TMTPro18x_K_F5 97.431 67.957 14697 9484 17405 14450 21518 19613 18051 18455 18002 16890 24770 25088 18953 22733 18748 14673 23982 21650 13593 8730.6 17493 14253 21888 19418 18413 18889 18598 17404 24843 25005 19564 23074 19332 15286 22879 20498 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8340200 7150 1879 6763 13581 10931 10931 1 9606 Homo sapiens 0.01246845952152853 ENVATTDTLESTTVGTSV Unmodified 1823.8636 0.86363226 3911 Q15046;Q15046-2;Q6ZTI3 KARS Lysine--tRNA ligase yes no 0 0 0 1.5 0.5 1 1 55.95 55.959 2 5.0404E-09 16957 20230619_1881_Aki_TMTPro18x_K_F2 159.64 142.2 26369 19744 24158 27007 23806 26643 29019 28586 33866 35190 33269 33688 33835 30863 27014 36467 34979 35443 24353 18140 24739 26669 24907 27009 29106 29246 34215 35162 34181 34167 34211 32217 28082 36472 33394 33673 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57858000 7151 3911 6764 13582;13583 10932;10933 10933 2 9606 Homo sapiens -0.015345008141366634 ENVIMSQILPCIK Unmodified 1543.8102 0.81022067 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6;A0A994J6A3 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 2.5 0.5 1 1 63.156 63.176 3 0.00086456 20076 20230619_1881_Aki_TMTPro18x_K_F2 87.18 57.121 131160 120570 127710 128750 126140 137920 135540 149330 138940 154250 147250 137700 180900 145340 148140 175490 185130 188220 121340 110420 129990 129560 131370 139090 136310 151830 141830 155080 152090 140890 181980 151360 153400 176490 176800 178630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 296030000 7152 1860 6765 13584;13585 10934;10935 10935 2 9606 Homo sapiens 0.06006796459382713 ENVLIGDGAGFK Unmodified 1218.6245 0.62445203 1063 P11310-2;P11310;Q5HYG7;Q5T4U5;A0A0S2Z366;B4DWX6;B7Z9I1;F6YB23;A0A7P0TB51;A0A7P0T8G6;B4DJE7;A0A7P0TB55;B4DVB1;B4DVE0;A0A0S2Z3A5 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 4.5 1.12 1 1 1 1 55.637 55.686 3 3.3227E-06 16352 20230619_1886_Aki_TMTPro18x_K_F6 124.45 101.08 96260 81786 90595 101630 107970 122470 113710 118280 142680 115880 119420 111460 124870 103450 108670 130950 117620 130890 88987 75031 92842 101270 111010 122140 115190 121020 142720 117160 123790 113160 126490 108460 111410 131080 112550 124270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 363200000 7153 1063 6766 13586;13587;13588;13589 10936;10937 10937 2 9606 Homo sapiens 0.02388478326565746 ENVNATENCISAVGK Unmodified 1604.7464 0.74643444 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6;Q9BVS9 IPO5;RANBP5 Importin-5 yes no 0 0 0 4.5 0.5 1 1 46.862 46.922 3 1.4833E-07 12428 20230619_1885_Aki_TMTPro18x_K_F5 122.93 121.36 210810 224410 242400 238700 249540 231480 267310 237960 196730 337970 321200 258320 309740 226020 267750 360020 344840 297210 195540 205420 243650 239950 258440 235040 266450 245380 210000 333460 322780 265030 314260 241460 277760 355820 328860 283130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1012399999.9999999 7154 782 6767 13590;13591 10938;10939 10939 2 9606 Homo sapiens -0.031748924440762494 ENVNLAQIR Unmodified 1055.5724 0.57235688 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2;Q6P1Q5 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 0 5.5 0.5 1 1 43.961 44.047 2 0.00010342 11237 20230619_1886_Aki_TMTPro18x_K_F6 155.07 91.503 796010 661830 738220 775940 953380 1107800 951560 905010 1276200 630710 667670 599410 590270 498570 749720 625550 741580 591730 735680 606880 758330 778530 974330 1090100 968770 931170 1255300 652640 710120 607030 612810 524340 758360 625140 708580 562940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 421260000 7155 2181 6768 13592;13593 10940;10941;10942 10941 3 9606 Homo sapiens 0.04679359703436603 ENVNSLLPVFEEFLK Unmodified 1776.9298 0.92980175 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 7 0.816 1 1 1 66.726 66.754 3 0.00018107 20641 20230619_1888_Aki_TMTPro18x_K_F8 93.424 74.18 35969 41886 42698 32915 47624 51044 52159 50345 67322 42044 46486 40825 37496 34722 53181 47457 41711 37696 33399 38246 42836 34287 49188 50265 52771 51234 66797 42949 48272 41339 39319 36662 53139 46963 39992 35922 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80085000 7156 2863 6769 13594;13595;13596 10943 10943 1 9606 Homo sapiens 0.07241404609294477 ENVSNCIQLK Unmodified 1203.5918 0.59177169 4682 Q9ULC4;Q9ULC4-3 MCTS1 Malignant T-cell-amplified sequence 1 yes no 0 0 0 6.5 0.5 1 1 47.519 47.604 3 0.0026395 12465 20230619_1887_Aki_TMTPro18x_K_F7 80.24 50.304 267080 221410 267000 292420 276690 333840 300050 302870 360600 323630 323530 300450 355150 275370 272280 336930 353040 342060 246980 203270 271580 289940 287550 333610 303070 312090 362430 325370 334810 305330 357430 288310 283130 337680 336930 324880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 467570000 7157 4682 6770 13597;13598 10944 10944 1 9606 Homo sapiens -0.0018805206793786056 ENVYDELR Unmodified 1036.4825 0.48253882 2629 B7ZAX9;B4DZC0;O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 1 0 1 45.408 45.408 2 0.010693 12421 20230619_1880_Aki_TMTPro18x_K_F1 98.033 66.661 140780 104680 120900 127940 133990 154960 137470 138980 201270 141630 134370 115070 143300 113770 119720 144790 146650 132460 129950 96067 124710 127650 138460 154260 140320 143120 198620 142360 141230 118070 144850 119090 123770 144240 139960 125990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165370000 7158 2629 6771 13599 10945 10945 1 9606 Homo sapiens -0.03424314695780595 ENYAELLEDAFLK Unmodified 1553.7613 0.76133944 883 Q8TBN2;A0A087X0S5;A0A384P5H7;P12109;A0A804HJ28 COL6A1 Collagen alpha-1(VI) chain yes no 0 0 0 4.5 0.5 1 1 65.58 65.608 3 0.0017503 20423 20230619_1885_Aki_TMTPro18x_K_F5 75.462 61.043 6349.2 7703.8 8379.5 8888.4 7042.9 8342.9 8315.1 9944.2 9819.9 11032 10608 11166 12836 9473 12935 9592.3 10602 11244 5904.2 7054.8 8327.1 8875.9 7455.6 8514.9 8365 10073 9959.2 11089 10951 11265 13020 9843.9 13004 9741.9 10171 10659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14483000 7159 883 6772 13600;13601 10946 10946 1 9606 Homo sapiens 0.006609226956243219 ENYTWSQDYTDLEVR Unmodified 1917.8381 0.83808621 2173 Q8IVD9;B0FTY2;A4D2J8 NUDCD3;KIAA1068 NudC domain-containing protein 3 yes no 0 0 0 3 0 1 57.705 57.737 2 0.0097468 17489 20230619_1882_Aki_TMTPro18x_K_F3 66.498 54.521 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7160 2173 6773 13602 10947 10947 1 9606 Homo sapiens -0.0841193054584437 ENYVWNVLLHR Unmodified 1441.7466 0.74663285 1595 Q92538;Q92538-2;Q92538-3;A0A669KBG8;A0A669KB10;A0A7P0RGV0;A0A7I2YQM2;A0A7I2V2L5;A0A7I2V514;A0A7I2YQ65;A0A7I2V3Y5;A0A7I2V529;A0A7I2V4K2;A0A7I2V2L4;A0A7I2V452;A0A7I2V3H2;A0A7I2V3S0 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes no 0 0 0 3 0 1 60.466 60.495 3 2.1239E-06 18627 20230619_1882_Aki_TMTPro18x_K_F3 129.82 109.39 19160 13979 17556 19330 13505 17483 16441 16712 21339 14917 19783 19293 17583 15311 21245 18237 18136 19874 17692 12847 17918 19052 14460 17791 16566 17090 21365 15316 20278 19263 18188 16077 21351 18381 17394 18852 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6251200 7161 1595 6774 13603 10948 10948 1 9606 Homo sapiens 0.04342940128799455 EPAAAISRPR Unmodified 1066.5883 0.5883413 2457;2620 Q59FH4;H0Y5J4;B4DDU5;Q9UJU6-5;Q9UJU6;B4DKZ4;B4DXL9;Q9UJU6-2;Q9UJU6-3;B4DDD6;Q9UJU6-4;B4DUF9;Q9UJU6-6 DBNL Drebrin-like protein no no 0 0 1 7 0.816 1 1 1 31.744 31.789 3 7.5127E-05 6233 20230619_1888_Aki_TMTPro18x_K_F8 119.27 78.11 87369 57938 75046 93802 98274 104790 103300 103120 124110 102500 123760 122300 120470 105060 102150 114470 131110 121020 80597 53370 77729 91852 100400 105040 104480 105450 125150 104260 126810 122690 122230 109420 105850 115230 125100 114910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86113000 7162 2457;2620 6775 13604;13605;13606 10949;10950 10950 2 9606 Homo sapiens 0.05771065940371045 EPAAEIEALLGMDLVR Unmodified 1725.8971 0.89712142 897 A0A090N7T9;Q12765;Q12765-2;A0A024RA21;Q12765-3;C9K052;B8ZZP4;C9J7U9;B4DE46 SCRN1 Secernin-1 yes no 0 0 0 4.5 0.5 1 1 66.608 66.636 3 3.7948E-08 20792 20230619_1885_Aki_TMTPro18x_K_F5 128.9 109.57 10447 8844.4 8462.7 8155.8 9206.1 9251.9 9693.9 11620 11644 9873 12600 11081 10617 11393 13537 13626 14523 12762 9647.2 8092.9 8769.6 8319.7 9517.2 9334.4 9812.4 11652 11778 10109 12791 11221 11056 11847 13769 13610 13874 12137 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11132000 7163 897 6776 13607;13608 10951;10952 10952 2 9606 Homo sapiens 0.06320874214770811 EPACDDPDTEQAALAAVDYINK Unmodified 2405.0693 0.069284717 2780 CON__P12763 yes yes 0 0 0 3 1.58 1 1 1 1 62.211 62.227 3 3.0576E-12 19274 20230619_1883_Aki_TMTPro18x_K_F4 131.18 126.08 + 37862 36874 46824 39833 64851 85687 61964 53704 103560 55634 62638 107610 62232 63797 63081 73072 96179 179070 35120 33768 47078 40580 66025 82397 63848 57137 101350 57816 66474 105230 63713 67839 66039 79120 92278 168660 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 293470000 7164 2780 6777 13609;13610;13611;13612 10953;10954;10955 10954 3 9606 Homo sapiens -0.07704715416957697 EPAFEDITLESERK Unmodified 1662.8101 0.81008055 1683 A0A8Q3SIG7;A0A8V8TM87;A0A8V8TM61;F5H578;A0A7N4I394;O75400-2;O75400;O75400-3;B4DPY2;Q4ZG51 PRPF40A;FNBP3 Pre-mRNA-processing factor 40 homolog A yes no 0 0 1 2.67 1.25 1 1 1 52.135 52.165 3 0.00038892 15251 20230619_1880_Aki_TMTPro18x_K_F1 92.265 34.194 29722 24599 29238 25709 20443 29629 23699 28482 36571 38596 33356 41843 45509 35594 25720 47952 42564 49376 27482 22534 29590 25947 22102 29632 24132 29429 36436 38562 34933 42096 45118 37592 27556 47995 40609 46857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 399480000 7165 1683 6778 13613;13614;13615 10956 10956 1 9606 Homo sapiens 0.005187912646761106 EPAITSQNSPEAR Unmodified 1398.6739 0.67392142 1319 P23193;A0A384MTX4;A0A1W2PPZ5;B7Z4W0;P23193-2;A0A1W2PRL9;E5RIS7 TCEA1 Transcription elongation factor A protein 1 yes no 0 0 0 2 0 1 36.469 36.527 2 8.4873E-06 8303 20230619_1881_Aki_TMTPro18x_K_F2 136.48 109.22 11036 7164 4369.1 9423.7 8152.2 9282.5 9293.3 7930.7 13217 11121 12187 19049 17111 15148 9361.4 23296 25017 34924 10140 6583.6 5081.8 9318.3 8226.1 9365.4 9411.6 8292.7 13199 11316 12804 18844 16965 16198 10600 23874 23853 33012 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8885000 7166 1319 6779 13616 10957 10957 1 9606 Homo sapiens -0.009468584552678294 EPALGPHGPSR Unmodified 1116.5676 0.56760585 864 A0A087WZ13;E9PAU2;Q8IY67-2;K7EQG2 RAVER1 Ribonucleoprotein PTB-binding 1 yes no 0 0 0 4.5 0.5 1 1 32.644 32.714 3 1.0737E-06 6596 20230619_1883_Aki_TMTPro18x_K_F4 137.92 97.816 96271 75561 107550 106870 140690 129240 127900 118310 132420 93217 112280 113480 99464 90812 117680 81146 115910 102580 89083 69438 108780 105630 142910 128780 129810 120990 133720 96234 115650 113480 102830 93901 119040 83036 110830 97249 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94244000 7167 864 6780 13617;13618 10958;10959 10958 2 9606 Homo sapiens 0.013984755607225452 EPALNEANLSNLK Unmodified 1411.7307 0.73070802 1053 A0A384NQ35;A0A0K0K1L8;Q06323-3;Q06323;Q06323-2;Q6FHU3 PSME1 Proteasome activator complex subunit 1 yes no 0 0 0 5 0 1 54.341 54.411 3 0.00054418 15581 20230619_1885_Aki_TMTPro18x_K_F5 101.53 83.723 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7168 1053 6781 13619 10960 10960 1 9606 Homo sapiens 0.04131189101235577 EPALTAVAR Unmodified 926.51853 0.5185304 4175 Q7Z5L9-2 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes yes 0 0 0 5 0 1 41.812 41.897 2 0.0053035 10303 20230619_1885_Aki_TMTPro18x_K_F5 101.25 46.641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7169 4175 6782 13620 10961 10961 1 9606 Homo sapiens 0.052331872717559236 EPAQTEAAASTEPATR Unmodified 1628.7642 0.76419299 2951 F1T0L5;Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 yes no 0 0 0 1 0 1 35.051 35.051 3 8.569E-12 8012 20230619_1880_Aki_TMTPro18x_K_F1 136.01 117.65 5212.4 3312.7 5442.4 6270.1 8423.4 8552.2 7823.7 9409.1 11013 6702.4 7743.5 7063.8 9774.8 8726.9 9220.9 6329.9 10341 8623.2 4814.8 3058.9 5559.6 6114.1 8496 8489.1 8019.4 9472.3 10896 6939.6 8183.9 7214.2 9890.5 8823.1 9430.1 6539.1 9871.8 8172.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19806000 7170 2951 6783 13621 10962 10962 1 9606 Homo sapiens -0.025038539175284313 EPATINYPFEK Unmodified 1307.6398 0.63976774 344 E9PKH6;A0A024R5K3;E9PPW7;Q53G17;O00217;E9PN51;F8W9K7;B4DYI3 NDUFS8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes no 0 0 0 6 0 1 54.981 55.057 3 0.00020674 16017 20230619_1886_Aki_TMTPro18x_K_F6 110.66 87.436 73780 57122 71731 91384 89236 114600 100160 92416 104980 95315 101740 90637 109470 94618 89325 104660 97924 112630 68184 52575 73457 89675 91715 113510 100470 96039 106530 96090 104790 92426 110530 98022 91751 105410 93712 106840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 438850000 7171 344 6784 13622 10963 10963 1 9606 Homo sapiens -0.0017465487624122034 EPCVLGVDEAGR Unmodified 1300.6082 0.60815004 3316 Q6UQL6;O75792;Q6IBG3;A0A2R8Y606;A0A2R8Y658 RNASEH2A;JUNB Ribonuclease;Ribonuclease H2 subunit A yes no 0 0 0 2 0 1 46.171 46.25 2 2.4346E-05 12681 20230619_1881_Aki_TMTPro18x_K_F2 138.76 112.25 46275 31699 40938 42718 31856 49186 40451 37705 55221 48969 51213 56400 59020 57092 37023 72443 79246 77253 42704 29131 41918 42304 34191 48942 40748 39634 55243 49156 53074 56967 59046 59655 40558 72704 75400 73331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68467000 7172 3316 6785 13623 10964 10964 1 9606 Homo sapiens -0.030129709018638096 EPEEVATCVGR Unmodified 1245.566 0.56595087 245 B2R642;A8K6A6;A0A024R3I5;P43121;B3KXZ9 MCAM Cell surface glycoprotein MUC18 yes no 0 0 0 2 0.816 1 1 1 40.629 40.695 2 1.288E-06 10107 20230619_1881_Aki_TMTPro18x_K_F2 167.12 145.97 79230 55685 63890 82823 62403 82984 75104 80138 129360 110430 107590 130800 141610 129930 81624 186360 173950 195670 73080 51227 66287 81356 65539 83775 76643 82882 127820 110680 112960 131900 140800 137000 89738 186530 165690 185670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152200000 7173 245 6786 13624;13625;13626 10965;10966 10966 2 9606 Homo sapiens -0.047009463102540394 EPELLEPIPYEFMA Unmodified 1676.8008 0.80076142 3593 Q6IAX2;P46778;Q59GK9 RPL21 60S ribosomal protein L21 yes no 0 0 0 2.78 1.31 2 2 2 2 1 67.433 67.451 2;3 0.036468 21371 20230619_1883_Aki_TMTPro18x_K_F4 38.787 31.417 24413 18595 16678 20850 14597 24265 19416 23372 31385 29951 24406 33643 36361 35185 22747 50297 45604 64724 22506 17041 17580 20916 15541 24125 19668 24100 31037 30044 25803 34045 36149 37050 24791 51004 43545 61252 5 5 5 6 5 5 6 6 6 6 5 6 6 6 6 6 6 6 59484000 7174 3593 6787 13627;13628;13629;13630;13631;13632;13633;13634;13635 10967;10968 10968 2 9606 Homo sapiens -0.01056693345185522 EPELLEPIPYEFMA Oxidation (M) 1692.7957 0.79567604 3593 Q6IAX2;P46778;Q59GK9 RPL21 60S ribosomal protein L21 yes no 0 1 0 2 0.816 2 2 2 65.862 65.876 2;3 0.032493 21162 20230619_1881_Aki_TMTPro18x_K_F2 64.04 57.937 7253.1 6052.8 10301 11080 8363.7 10478 9515.1 10932 11107 10863 13229 12216 14389 14051 9714.1 19660 17008 20940 6730.9 5579.9 10188 10760 8874.6 10640 9587.3 11135 11307 11027 13511 12429 14447 14724 10267 19703 16230 19861 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2 3 3 3 69245000 7175 3593 6787 13636;13637;13638;13639;13640;13641 10969;10970 10969 2261 2 9606 Homo sapiens -0.023009972078170904 EPESILQVLSQMEK Unmodified 1629.8284 0.82837315 1234 Q2TU84;A0A140VK69;P17174;P17174-2;B7Z1I2 GIG18;GOT1 Aspartate aminotransferase;Aspartate aminotransferase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 65.156 65.183 3 2.817E-13 20431 20230619_1886_Aki_TMTPro18x_K_F6 150.12 92.02 23025 16490 20128 22630 14391 21923 21192 23526 26465 25617 26422 29798 35592 29066 26288 33026 34425 40190 21252 15154 20624 22337 15648 22238 21148 23977 26663 25907 27527 30036 35591 30233 27381 33502 32898 38076 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65493000 7176 1234 6788 13642;13643 10971;10972 10971 2 9606 Homo sapiens 0.03865209915034029 EPEVLSTMAIIVNK Oxidation (M) 1558.8276 0.82764487 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V488;B7ZB16;B4DR01;B3KWD0 XPO1 Exportin-1 yes no 0 1 0 6 0 1 57.849 57.918 3 1.5018E-05 17234 20230619_1886_Aki_TMTPro18x_K_F6 113.24 84.607 34526 30727 34122 41887 39030 36333 39213 39831 45146 38873 45969 43278 45955 38463 44872 46971 48719 60235 31939 28212 34807 41299 40108 37255 39717 40440 45667 39478 47111 43602 46849 40310 45876 47793 46656 57029 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69508000 7177 3228 6789 13644 10973 10973 1899 1 9606 Homo sapiens 0.07058415266010343 EPFFHGHDNYDQLVR Unmodified 1872.8543 0.8543454 1352 Q5U5J2;P68400;A0A2R8Y5A0;B2R6D7;E7EU96;Q2I0Y7;A0A2R8YD58;A0A2R8YFU2;B5BUH5;A0A2R8YF43;A0A2R8YDP2;P68400-2 CSNK2A1 Casein kinase II subunit alpha yes no 0 0 0 4.5 0.5 1 1 46.706 46.766 4 1.2612E-33 12358 20230619_1885_Aki_TMTPro18x_K_F5 212.35 204.19 74241 56739 69010 78358 71466 82482 75244 71989 102660 71068 81052 78598 86177 76158 76445 96571 92119 88520 68581 52133 70632 77375 74229 82828 76478 74280 102070 72194 84373 79439 87377 79688 78881 96209 87963 84176 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152540000 7178 1352 6790 13645;13646 10974;10975 10975 2 9606 Homo sapiens -0.04716759798429848 EPFFHGQDNYDQLVR Unmodified 1863.854 0.85401105 3067 P19784;H3BNI9;H3BSA1 CSNK2A2 Casein kinase II subunit alpha' yes no 0 0 0 5 0 1 51.857 51.931 3 0.00042364 14614 20230619_1885_Aki_TMTPro18x_K_F5 87.647 78.117 46424 38930 41345 48621 49682 38677 48176 52232 51415 76821 77558 87952 104140 80167 67390 76879 87754 99266 42895 35718 42570 48187 50785 40230 48797 53078 53379 76596 79537 88442 103630 82852 70347 78539 83845 94004 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49102000 7179 3067 6791 13647 10976 10976 1 9606 Homo sapiens -0.043361795183045615 EPFGTEGR Unmodified 891.40865 0.4086456 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4;A0A8Q3WL93;A0A8Q3WLT0;A0A8Q3WL80;E7EM57;Q0PHS1;A0A8Q3WL83;E9PD92;Q0PHS6 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 2.5 0.5 1 1 38.12 38.178 2 0.030541 8946 20230619_1881_Aki_TMTPro18x_K_F2 79.596 50.023 102550 63171 81395 94436 110130 154830 120790 102610 176500 157110 174210 253950 243100 206090 144880 264380 281260 329940 94517 58153 85017 93481 112820 150650 122780 109950 176570 158930 182260 251640 241420 217280 157250 267980 268130 312510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225780000 7180 1464 6792 13648;13649 10977 10977 1 9606 Homo sapiens -0.041402380674185224 EPFLQQLK Unmodified 1001.5546 0.55458155 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;B0QY90;B3KNG0;Q7Z5X3;Q8N7H0 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 0 8 0 1 56.367 56.424 2 0.0068057 16287 20230619_1888_Aki_TMTPro18x_K_F8 110.12 45.082 249710 221510 216920 236800 260330 319710 273670 265440 359740 139830 140980 91088 126090 94739 203640 141770 126540 100870 230770 202900 223910 239000 267810 315700 277590 271550 352160 147070 154120 95158 132800 100140 201110 139630 121640 96333 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 429990000 7181 2176 6793 13650 10978 10978 1 9606 Homo sapiens 0.05386644448617517 EPFLSCCQFAESLR Unmodified 1742.7756 0.77562607 2765 CON__ENSEMBL:ENSBTAP00000007350;B4DIE5;A0A3B3ISA6;A0A8V8TLP6;F5GXS0;A0A140TA49;A0A140TA44;A0A140TA32;A0A140TA29;A0A0G2JL54;A0A0G2JPR0;P0C0L4-2;P0C0L5;P0C0L4 C4B;C4A Complement C4-A;Complement C4 beta chain;Complement C4-A alpha chain;C4a anaphylatoxin;C4b-A;C4d-A;Complement C4 gamma chain;Complement C4-B;Complement C4 beta chain;Complement C4-B alpha chain;C4a anaphylatoxin;C4b-B;C4d-B;Complement C4 gamma chain yes no 0 0 0 7 0 1 60.232 60.278 2 0.0032051 17949 20230619_1887_Aki_TMTPro18x_K_F7 100.55 85.352 + 13336 10870 12160 11291 14110 10848 13681 11610 16576 18091 19114 21828 16061 13605 15574 15549 15167 17066 12322 9957.7 12468 11374 14460 11042 13907 11990 16830 18041 19375 21684 16461 14406 15824 15682 14529 16186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14917000 7182 2765 6794 13651 10979 10979 1 9606 Homo sapiens -0.0660507141940343 EPFPTIYVDSQK Unmodified 1422.7031 0.70309628 3265 O43776;K7EIU7;K7EPK2;B4DF91;B4DGT6;O43776-2;K7EJ19;K7EQ35 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 0 7 0.816 1 1 1 58.38 58.436 3 6.9981E-14 17461 20230619_1886_Aki_TMTPro18x_K_F6 182.08 152.15 127750 99387 114340 146240 113140 131060 125090 120640 140210 167800 153900 187350 192460 169850 154870 228110 187040 228750 117990 91379 117440 143540 118030 133400 125930 125310 142740 167620 159150 188680 193490 178830 160340 228090 178940 217110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 428960000 7183 3265 6795 13652;13653;13654 10980;10981 10980 2 9606 Homo sapiens 0.008652858409959663 EPFTFPVK Unmodified 963.50657 0.50656873 230 Q9H0W9;E9PQS1;A0A024R396;A8K718;A0A087WT99;E9PPB5;Q9H0W9-2;E9PLC5;E9PLB3;E9PIP1;E9PSC3;A0A024R3B0;Q9H0W9-3;E9PR95 C11orf54 Ester hydrolase C11orf54 yes no 0 0 0 8 0 1 58.542 58.589 3 0.015027 17215 20230619_1888_Aki_TMTPro18x_K_F8 72.547 42.738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7184 230 6796 13655 10982 10982 1 9606 Homo sapiens 0.023355705285666772 EPFTIAQGK Unmodified 989.5182 0.51819605 3032 H0Y993;P35659;A0A494C028;B4DNW3;A0A494C198;H0Y8X0;D6RDA2;D6R9L5 DEK Protein DEK yes no 0 0 0 7.2 0.748 1 2 2 50.312 50.391 2;3 0.00020548 13658 20230619_1888_Aki_TMTPro18x_K_F8 144.09 102.59 266940 227330 238260 245060 252270 290130 260890 274920 306350 307000 319490 323530 354430 290120 290490 381320 364910 326160 246680 208280 244670 246730 261380 289670 264050 282690 310140 309060 328670 326700 357580 305140 301110 378390 348160 310520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 977060000 7185 3032 6797 13656;13657;13658;13659;13660 10983;10984 10984 2 9606 Homo sapiens 0.023017675519099612 EPGCGCCSVCAR Unmodified 1411.5101 0.51010903 3471 P18065 IGFBP2 Insulin-like growth factor-binding protein 2 yes yes 0 0 0 3.5 0.5 1 1 33.142 33.206 2 2.3114E-06 6786 20230619_1883_Aki_TMTPro18x_K_F4 145.75 143.81 28043 15285 25952 28926 23727 25471 25694 23154 29195 42394 46734 55199 54470 31501 32931 47596 49811 44733 25861 14125 26517 28019 24877 25953 25920 24354 30298 42161 47487 54607 54224 34176 34875 47365 47460 42536 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36523000 7186 3471 6798 13661;13662 10985 10985 1 9606 Homo sapiens -0.17918562085355916 EPGSGSGGGVYWVDSQQK Unmodified 1836.8279 0.82785588 4577 Q9NQT5;Q9NQT5-2;Q9NYS3 EXOSC3;PNAS-3 Exosome complex component RRP40 yes no 0 0 0 5 0 1 50.731 50.806 3 2.284E-09 14123 20230619_1885_Aki_TMTPro18x_K_F5 122.96 96.523 40850 27729 36887 34047 28879 38835 36806 34754 50989 49088 49862 55542 58158 54006 39225 63809 62297 69598 37702 25459 37669 33938 30934 38800 37095 36177 51099 49062 51584 56037 58250 56264 41631 64210 59433 66016 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76072000 7187 4577 6799 13663 10986 10986 1 9606 Homo sapiens -0.05708493480437937 EPGTVALVSK Unmodified 999.56006 0.56006086 4543 Q9HAV7;B4DWV5 GRPEL1 GrpE protein homolog 1, mitochondrial;GrpE protein homolog yes no 0 0 0 6.5 0.5 1 1 48.284 48.367 3 0.0013485 12837 20230619_1887_Aki_TMTPro18x_K_F7 90.827 70.523 135350 115530 126310 126560 135810 145320 140990 140400 170150 151740 160740 182860 155650 142930 165820 180070 185780 179910 125120 105860 129200 127210 140470 145470 142770 144080 171270 153710 165330 182830 159610 150640 169610 180320 177520 170900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 217560000 7188 4543 6800 13664;13665 10987;10988 10988 2 9606 Homo sapiens 0.060263232404167866 EPHMCLVR Oxidation (M) 1056.4845 0.48446985 3916 Q15061 WDR43 WD repeat-containing protein 43 yes yes 0 1 0 5 0.816 1 1 1 29.84 29.898 3 0.0027594 5653 20230619_1885_Aki_TMTPro18x_K_F5 95.531 71.781 54079 42295 49235 50584 63247 68867 61414 62013 67297 46921 48012 41518 44531 35255 51058 47006 46669 41153 49955 38799 50638 50646 64543 68092 62195 63402 67405 48100 49994 42224 45856 37204 51539 46737 44657 39169 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37045000 7189 3916 6801 13666;13667;13668 10989;10990 10990 2593 2 9606 Homo sapiens -0.04151300483158593 EPHMCLVR Unmodified 1040.4896 0.48955523 3916 Q15061 WDR43 WD repeat-containing protein 43 yes yes 0 0 0 6 0 1 37.155 37.223 3 0.00077293 8446 20230619_1886_Aki_TMTPro18x_K_F6 121.99 100.53 74414 63319 74293 78141 86565 103140 85582 74978 102980 73416 67014 60296 66247 53296 77938 70650 74684 57513 68825 58085 75698 77997 89000 101730 86837 78526 102430 73976 70405 61597 68190 56132 78819 70015 71369 54828 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58047000 7190 3916 6801 13669 10991 10991 1 9606 Homo sapiens -0.029069966205270248 EPHPLQFLR Unmodified 1135.6138 0.61382777 2563 F8WE64;C9JLH5;C9JA82;C9J2D6;C9J9N8;C9JEX8;C9IYN7;B4DP60;Q0PNE2-2;Q0PNE2 ELP6 Elongator complex protein 6 yes no 0 0 0 1 0 1 46.14 46.14 3 0.0025131 12760 20230619_1880_Aki_TMTPro18x_K_F1 78.934 40.848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7191 2563 6802 13670 10992 10992 1 9606 Homo sapiens 0.05144540462788427 EPHSFQSR Unmodified 986.45699 0.45699277 4544 Q9HB07;F8VR84;Q8WYI2;F8VQQ3;Q96CT6;H3BPH3 C12orf10;MST024 UPF0160 protein MYG1, mitochondrial yes no 0 0 0 4.4 1.85 2 2 1 25.589 25.679 3 0.0021606 3864 20230619_1883_Aki_TMTPro18x_K_F4 107 14.51 72715 47866 70285 78081 86590 90344 88216 94654 111280 83842 94966 99661 94629 78071 73078 64282 115560 105950 67137 44098 71893 76490 88690 90486 89556 96088 111320 85823 98185 99648 95596 80590 76972 67184 110090 100220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 33243000 7192 4544 6803 13671;13672;13673;13674;13675 10993;10994;10995 10993 3 9606 Homo sapiens -0.036777444275230664 EPIAASTNR Unmodified 957.48796 0.48795855 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 3.5 0.5 1 1 32.943 33.014 2 1.7389E-10 6715 20230619_1883_Aki_TMTPro18x_K_F4 164.96 145.32 27232 14210 34060 31240 42863 53578 39174 45215 44804 31064 46483 52794 38807 38126 40094 20477 48347 49616 25176 13167 34157 30410 43762 52228 39905 46362 45323 32829 47323 52056 39949 38885 41090 22562 46187 46812 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54628000 7193 1022;3868 6804 13676;13677 10996;10997 10997 2 9606 Homo sapiens 0.007514088867083046 EPIEDLSPDR Unmodified 1169.5564 0.55643205 466 A0A024R7P3;A0A024R7N2;Q9HD20-2;Q9HD20 ATP13A1 Manganese-transporting ATPase 13A1 yes no 0 0 0 1 0 1 46.338 46.338 2 0.00062952 12872 20230619_1880_Aki_TMTPro18x_K_F1 119.68 82.122 33639 25637 31682 33145 32559 42465 38497 35762 55371 33843 45192 47996 49307 42241 37170 52110 53300 62958 31077 23539 32380 32971 33995 42057 38972 36960 54954 34793 47025 47918 49641 44291 38987 52761 50908 59648 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28530000 7194 466 6805 13678 10998 10998 1 9606 Homo sapiens -0.021563913241152477 EPIILPCSHNVCLPCAR Unmodified 2034.9802 0.98015632 2992 F8W8C1;Q6ZTA4;Q6ZTA4-2 TRIM67 Tripartite motif-containing protein 67 yes no 0 0 0 1 0 1 51.736 51.736 3 2.0956E-06 15079 20230619_1880_Aki_TMTPro18x_K_F1 109.48 105.93 29615 29398 24542 28316 19284 31169 36522 32873 30755 31438 28709 38103 49680 34987 35107 48367 53966 60623 27382 26895 25320 28742 20975 31331 35630 33439 31597 32045 30535 38277 49321 36954 37067 49021 51498 57426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133160000 7195 2992 6806 13679 10999 10999 1 9606 Homo sapiens 0.004065443994932139 EPIVGSTDYGK Unmodified 1164.5663 0.56626845 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4 0 1 47.259 47.301 2 0.0051763 12746 20230619_1883_Aki_TMTPro18x_K_F4 102.06 81.732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7196 1022;3868 6807 13680 11000 11000 1 9606 Homo sapiens -0.009432033187067645 EPIVGSTDYGKDEDSAEALLK Unmodified 2236.0747 0.074687671 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 2.75 0.829 2 1 1 57.658 57.675 3;4 7.5013E-16 17660 20230619_1881_Aki_TMTPro18x_K_F2 148.38 109.09 119970 99316 110090 124270 102200 121040 127420 122770 135130 155730 157960 161720 170860 144570 138550 183790 168040 185490 110860 91128 112640 123400 107530 122670 127280 126220 138230 155760 161560 163340 172440 151780 143340 184010 160620 176100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 233700000 7197 1022;3868 6808 13681;13682;13683;13684 11001;11002 11001 2 9606 Homo sapiens 0.006093314371810266 EPLGPALAHELR Unmodified 1301.7092 0.70918471 3841 V9HWG1;Q13228-3;Q13228;Q13228-4;B4DPI7;Q13228-2 HEL-S-134P;SELENBP1 Selenium-binding protein 1 yes no 0 0 0 4.5 0.5 1 1 47.066 47.125 3 7.9612E-05 12594 20230619_1885_Aki_TMTPro18x_K_F5 113.82 92.915 20182 17269 21501 18856 20624 24693 28727 23206 28959 24910 21819 23457 25270 23584 23128 28557 30966 29129 18678 15823 21712 19002 21711 24493 28481 23863 29200 25054 22890 23884 25609 24581 24017 28633 29540 27668 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104470000 7198 3841 6809 13685;13686 11003 11003 1 9606 Homo sapiens 0.07039848863178122 EPLGTHGHMK Oxidation (M) 1121.5288 0.52877751 3961 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 1 0 6 0.816 1 1 1 28.89 28.961 4 0.0055351 5305 20230619_1885_Aki_TMTPro18x_K_F5 77.14 60.79 16178 10245 12207 17015 19085 18034 14609 20858 23002 18397 19853 17703 23149 13859 15219 20156 22312 20315 14908 9442.3 12857 16627 19164 18220 15258 21027 22828 18704 20632 17889 23112 14785 16033 20146 21266 19301 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13481000 7199 3961 6810 13687;13688;13689 11004 11004 2627 1 9606 Homo sapiens -0.02712573065309698 EPLLAHVR Unmodified 933.5396 0.53960019 108 B7Z6F7;A0A024R0R6;Q92797;M0R033 SYMPK Symplekin yes no 0 0 0 7 0 1 38.95 39.014 3 0.00086943 8853 20230619_1887_Aki_TMTPro18x_K_F7 120.46 94.63 40481 30803 35297 36167 42161 49292 43060 39775 52702 46778 45404 44908 46643 38735 43068 40192 48439 42067 37375 28255 36400 36255 43323 48627 43646 41476 52852 46868 46978 45442 47395 40248 44133 40489 46250 39959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14523000 7200 108 6811 13690 11005 11005 1 9606 Homo sapiens 0.07017197371283146 EPLMEEYSIATQVWK Unmodified 1822.8811 0.881137 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;Q01433-5;Q01433-3;Q01433-4;H0YF16;A0A804H2H4 AMPD2 AMP deaminase 2 yes no 0 0 0 5 0.816 1 1 1 63.844 63.878 3 0.0009644 19891 20230619_1886_Aki_TMTPro18x_K_F6 74.769 60.35 56587 47482 46477 58625 53443 64651 59058 56717 67287 60737 72408 68771 69122 56910 69103 67738 71793 80224 52255 43560 48242 58346 55189 64723 59469 58618 68249 61428 73889 69072 70633 59694 70413 68597 68724 76034 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182860000 7201 1570 6812 13691;13692;13693 11006 11006 1 9606 Homo sapiens 0.0026116797787381074 EPLSLINVR Unmodified 1039.6026 0.60259438 1871 A0A994J4Y8;Q96HS1-2;Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 0 0 0 8 0 1 55.162 55.229 2 0.0050167 15811 20230619_1888_Aki_TMTPro18x_K_F8 88.177 75.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7202 1871 6813 13694 11007 11007 1 9606 Homo sapiens 0.08437718368668357 EPLTPEEVQSVR Unmodified 1382.7042 0.70415892 4103 Q6FI81-3;Q6FI81;H3BV90;H3BT65;H3BUG4;B4DHB9;H3BPG7 CIAPIN1 Anamorsin yes no 0 0 0 2 0 1 46.371 46.451 2 0.00061253 12803 20230619_1881_Aki_TMTPro18x_K_F2 101.48 73.657 62476 40381 58010 64403 68116 80973 79533 72674 93496 71138 80232 76197 80751 66397 70996 82409 80995 89426 57660 37195 59512 63238 70326 80377 79915 74788 93843 72185 82930 76836 81932 69683 72984 82912 77458 84832 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61682000 7203 4103 6814 13695 11008 11008 1 9606 Homo sapiens 0.028115002098729747 EPLVATNLPGR Unmodified 1165.6455 0.64552182 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 7 0 1 47.817 47.905 2 0.002198 12619 20230619_1887_Aki_TMTPro18x_K_F7 115.23 81.874 290590 228870 258970 276600 236730 270260 296220 272710 316410 315910 305100 281720 367100 277280 260700 388520 351540 318300 268390 209970 265500 275380 249380 273840 295830 279670 320860 315950 316020 287660 367490 292140 272680 384320 335240 303190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 273490000 7204 3578 6815 13696 11009 11009 1 9606 Homo sapiens 0.06932488426082273 EPLVDVVDPK Unmodified 1109.5968 0.5968403 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3S6H7G3;A0A3Q8ATF5;Q5U8W9;A0A3Q8APW9;A0A3Q8B022;A0A3Q8APX7;A0A3S6H7Z6;A0A3Q8AIR8;A0A3S6H7Y4;A0A3Q8B027;B4DJ87;E9PIX6;A0A3S6H765;A0A3Q8BCJ2;A0A3S6H8A6;A0A3Q8BCI7;E9PQ98;A0A3S6H824;A0A3S6H950;A0A3S6H942;A0A3S6H7K8;A0A3Q8AIS2;A0A3Q8APY3;A0A3S6H960;A0A3Q8B4M4;A0A3Q8AIS5;A0A3Q8B9M1;A0A3S6H8W3;A0A3S6H7E4;A0A3S6H7Y8 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 yes no 0 0 0 2.5 0.5 1 1 55.727 55.758 3 0.0012232 16679 20230619_1882_Aki_TMTPro18x_K_F3 91.855 56.631 72723 51530 62561 70790 98765 64521 61437 64794 80382 96726 87923 98751 120970 111910 83397 153380 117170 141660 67111 47359 64910 69809 98435 65852 64727 67034 81313 96115 91333 100680 120730 117150 87727 152580 111950 134590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135070000 7205 1536 6816 13697;13698 11010 11010 1 9606 Homo sapiens 0.04642575066327481 EPLWIRPDAPSR Unmodified 1435.7572 0.75719754 3548 P35520;P35520-2;C9JMA6 CBS Cystathionine beta-synthase yes no 0 0 1 7.5 0.5 1 1 47.311 47.384 3 1.1302E-09 12397 20230619_1888_Aki_TMTPro18x_K_F8 153.52 118.99 278010 231180 266440 259890 222820 274100 251400 255740 290760 331890 367150 362150 352230 313900 357980 391110 401840 405570 257010 211900 270930 260400 235970 275700 253250 264590 297140 332190 372460 364720 360340 329420 366520 392500 384080 385050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 522840000 7206 3548 6817 13699;13700 11011;11012 11012 2 9606 Homo sapiens 0.0567492278323698 EPLYVGVDDDK Unmodified 1248.5874 0.58739782 4606 Q9NVP1;Q4ZG72;Q8N254;H7C452;Q59FR7 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 0 0 1.5 0.5 1 1 52.298 52.318 3 0.0017877 15469 20230619_1881_Aki_TMTPro18x_K_F2 83.182 69.024 108390 91797 100390 102600 94476 118880 111680 108650 139820 118630 111330 115840 134160 108010 115200 126650 129090 128120 100180 84132 102590 102970 99239 118730 112470 111970 139690 119340 116590 117450 135280 112700 118300 127020 123370 121680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116630000 7207 4606 6818 13701;13702 11013 11013 1 9606 Homo sapiens -0.02695238009869172 EPMKDDITGEPLIR Unmodified 1612.8131 0.81305744 1240 F8W1A4;A0A140VK93;P54819-5;P54819-2;P54819;P54819-3;F8VY04;A0A5K1VW67;P54819-6;P54819-4 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes no 0 0 1 4 0.816 1 1 1 50.65 50.709 3 5.9723E-06 14290 20230619_1883_Aki_TMTPro18x_K_F4 119.92 98.862 177790 143460 143710 173840 123970 190580 140930 161770 213220 207250 193870 245700 275250 229200 147540 311000 284600 292130 164120 131600 148750 173230 131460 190660 143420 168460 212480 208270 203540 247120 272400 241260 160740 309640 271030 277630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 387700000 7208 1240 6819 13703;13704;13705 11014 11014 1 9606 Homo sapiens 0.031163431178811152 EPMQTGIK Oxidation (M) 918.44807 0.44806757 3504 V9HW26;P25705;P25705-2;P25705-3;K7EK77;B4DGW3;K7ENJ4;K7ERX7;K7EJP1 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 1 0 4.5 0.5 1 1 38.025 38.093 2 0.027236 8714 20230619_1885_Aki_TMTPro18x_K_F5 74.941 50.738 125360 77495 116680 141910 172830 184280 177420 183530 203470 139980 174920 179800 155850 149260 168540 111630 212290 178920 115670 71531 120270 138430 175180 182980 179350 186340 204410 145110 180050 179600 160450 152990 173230 116760 202470 169350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 121770000 7209 3504 6820 13706;13707 11015;11016 11016 2169 2 9606 Homo sapiens -0.014418541082022784 EPMQTGIK Unmodified 902.45315 0.45315295 3504 V9HW26;P25705;P25705-2;P25705-3;K7EK77;B4DGW3;K7ENJ4;K7ERX7;K7EJP1 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 6 0 1 42.883 42.977 2 0.0066701 10767 20230619_1886_Aki_TMTPro18x_K_F6 117.89 58.909 208600 125760 194710 203500 234460 274100 264260 252010 315860 245540 268920 278750 277530 246800 267610 208610 332180 286460 192470 115890 199660 199930 241390 271130 266180 258780 316750 249680 278590 280220 282660 253690 275490 214830 316890 271420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164300000 7210 3504 6820 13708 11017 11017 1 9606 Homo sapiens -0.0019755024559344747 EPNSENVDISSGGGVTGWK Unmodified 1931.8861 0.88609904 3687 P61026;Q53T70 RAB10 Ras-related protein Rab-10 yes no 0 0 0 4 0.816 1 1 1 53.492 53.54 3 9.4051E-15 15589 20230619_1883_Aki_TMTPro18x_K_F4 159.01 140.18 58694 48615 52523 47065 45854 61585 55253 56459 71179 74198 71082 81623 101140 82866 67709 105080 103150 106990 54229 44504 53747 47897 48538 61058 55674 58486 71665 74282 74286 82582 100700 86630 71599 105220 98377 101590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 905200000 7211 3687 6821 13709;13710;13711 11018 11018 1 9606 Homo sapiens -0.04256856625852379 EPPEQELQR Unmodified 1124.5462 0.54620171 904 A0A804HL29;A0A804HI79;A0A090N8Z0;A0A090N8G7;Q8TA86 RP9;LOC402478 Retinitis pigmentosa 9 protein yes no 0 0 0 1 0 1 36.415 36.415 2 0.0019768 8563 20230619_1880_Aki_TMTPro18x_K_F1 110.76 79.467 18829 12565 18394 22963 23140 23176 19630 20725 30251 21605 24251 30116 27559 22508 21085 26917 30713 29257 17387 11594 18815 22313 23570 23354 20323 21375 29957 22064 25337 29913 27722 23701 22116 27092 29283 27769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15899000 7212 904 6822 13712 11019 11019 1 9606 Homo sapiens -0.011089542586660173 EPPGLIFNK Unmodified 1013.5546 0.55458155 2364 B3KNS8;O75683 SURF6 Surfeit locus protein 6 yes no 0 0 0 8 0 1 55.326 55.388 2 0.0029556 15914 20230619_1888_Aki_TMTPro18x_K_F8 101.6 78.581 47527 33388 42359 47999 36112 39855 38440 36583 41899 52412 52836 53571 57339 44251 48673 59577 55352 58448 43869 30703 43390 47146 38083 40842 38761 38055 42978 52136 53891 54016 57934 46784 50077 59525 52918 55515 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11407000 7213 2364 6823 13713 11020 11020 1 9606 Homo sapiens 0.04834644448612835 EPPLELK Unmodified 824.46437 0.46436956 3234 Q53R19;O15144;A0A024R408;Q9BXV5;H7C3F9 ARPC2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 4 0.816 1 1 1 50.185 50.247 2 0.047565 13873 20230619_1885_Aki_TMTPro18x_K_F5 87.323 45.82 219680 157460 180210 227590 223410 285070 236520 217260 310040 259240 295520 313050 314360 270460 235930 360730 340800 374220 202670 144790 187350 224620 229520 282170 239870 227850 310940 261590 304700 314050 316660 285140 247790 361390 325290 355170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 289030000 7214 3234 6824 13714;13715;13716 11021;11022 11022 2 9606 Homo sapiens 0.045115951201864846 EPPQGAHFLSR Unmodified 1237.6204 0.62036971 2183 B0YJ76;P00374;B4DM58;A0A024RAQ3;P00374-2 DYR;DHFR Dihydrofolate reductase yes no 0 0 0 6.5 0.5 1 1 38.531 38.604 3 2.6693E-17 8670 20230619_1887_Aki_TMTPro18x_K_F7 189.52 143.88 89618 65721 71605 79748 66064 90740 75418 81645 105820 92239 94330 85217 100940 88403 70752 92973 97395 80626 82676 60314 74218 79523 69559 90671 76458 84297 105590 92498 97496 86965 101410 91304 74062 92620 92814 76771 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138290000 7215 2183 6825 13717;13718 11023;11024 11024 2 9606 Homo sapiens 0.011064336234994698 EPPSPGMER Unmodified 998.44913 0.4491302 3663 Q6PJJ2;P56182;Q53FR7;Q96J73 RRP1 Ribosomal RNA processing protein 1 homolog A yes no 0 0 0 2 0 1 35.039 35.096 2 0.015732 7703 20230619_1881_Aki_TMTPro18x_K_F2 65.404 51.896 28825 22890 22973 25489 31650 42638 28610 33580 51095 32687 30252 40211 47991 42227 27908 50846 52984 48307 26604 20983 23978 25747 32231 41585 29702 34878 49921 33373 32833 40551 47514 43931 30238 50745 50420 45927 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26766000 7216 3663 6826 13719 11025 11025 1 9606 Homo sapiens -0.05015639739303879 EPPTDVTPTFLTTGVLSTLR Unmodified 2144.1365 0.13650007 1182 B4DUT7;A0A140VJK6;P49915-2;P49915 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 3.67 3.09 1 1 1 64.139 64.149 3 2.4087E-22 20159 20230619_1880_Aki_TMTPro18x_K_F1 175.21 156.43 90713 72931 77140 97873 65877 83673 83076 84089 87840 182110 169070 191160 218460 180440 123840 231010 205460 250170 83767 66976 79455 96566 69896 85688 83004 88512 92886 178910 171820 193230 216890 189230 132710 232040 196110 237250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 278660000 7217 1182 6827 13720;13721;13722 11026;11027 11026 2 9606 Homo sapiens 0.11019727646907995 EPPYRVPR Unmodified 1012.5454 0.54541385 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 1 7.5 0.5 1 1 34.61 34.643 3 0.0073688 7320 20230619_1888_Aki_TMTPro18x_K_F8 89.698 46.955 150580 161720 150070 135540 187760 169830 152030 186400 141940 164090 170080 128870 153900 117510 159500 188830 179520 124070 139500 147760 152900 139720 190740 169750 155230 188490 146460 165830 172230 132310 157770 125350 163340 184910 171180 118730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191410000 7218 1059 6828 13723;13724 11028 11028 1 9606 Homo sapiens 0.03964295882940405 EPQGALERPPVDHGLAR Unmodified 1840.9544 0.9543938 4364 Q96HY7;C9JWN1 DHTKD1 Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial yes no 0 0 1 4.5 0.5 1 1 37.749 37.817 4 3.7197E-13 8692 20230619_1883_Aki_TMTPro18x_K_F4 155.92 113.82 24485 18826 24082 23101 28461 26073 30596 27690 30769 25931 36418 29876 35978 24287 30236 28872 33869 33733 22629 17275 24554 23027 29223 26191 30727 28136 31529 26424 37030 29995 36413 25515 31039 29216 32370 31988 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208390000 7219 4364 6829 13725;13726 11029 11029 1 9606 Homo sapiens 0.06755477535352838 EPQKPEQPTPR Unmodified 1305.6677 0.66771383 2080 Q9Y4E1;J3KP36;Q9Y4E1-4;Q9Y4E1-1;Q9Y4E1-2;Q9Y4E1-6;Q9Y4E1-3;Q9Y4E1-5;A8K5W5;Q641Q2;Q641Q2-2;B7ZME8;A0A087WYF6;E7ESD2;F8W7U3;B4DF48;B4DHJ2;Q9NVB8;B4DPK9 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A yes no 0 0 1 5 0 1 34.314 34.402 3 0.052679 7278 20230619_1885_Aki_TMTPro18x_K_F5 48.188 41.499 15989 12301 15849 16758 22890 22798 17487 19090 19945 18986 21554 18956 19890 18146 22970 14671 23451 22129 14778 11301 16217 16630 23058 22512 18029 19747 20249 19198 21957 19216 20506 18570 23282 15245 22424 20944 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33886000 7220 2080 6830 13727 11030 11030 1 9606 Homo sapiens 0.027106681038276292 EPQLAFHQR Unmodified 1124.5727 0.57269123 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O43242-2;O95325 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 6 0.816 1 1 1 37.494 37.572 3 2.0444E-06 8561 20230619_1886_Aki_TMTPro18x_K_F6 179.37 147.95 189390 120780 161530 176100 174030 186560 216480 198470 228980 175910 190420 195960 220740 187530 188170 239260 228200 201040 174670 111140 166710 173400 180910 188070 216100 201400 230860 179700 198560 197890 222840 196380 194400 237330 217770 191450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 572040000 7221 2361 6831 13728;13729;13730 11031;11032 11032 2 9606 Homo sapiens 0.01538779423322012 EPSEVPTPK Unmodified 982.49713 0.49712625 733 B4DWA0;A0A024RCT9;P17096;P17096-3 HMGA1 High mobility group protein HMG-I/HMG-Y no no 0 0 0 3.5 0.5 1 1 41.894 41.946 2 0.00032776 10315 20230619_1883_Aki_TMTPro18x_K_F4 139.74 97.549 82706 55188 69276 79479 67216 77601 81557 75002 104280 97715 105560 110310 128150 103460 88385 108480 145870 139090 76285 50761 71527 78212 70461 78529 82087 77450 105000 97958 109210 111160 128200 107290 93846 110580 138970 131810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 320070000 7222 733 6832 13731;13732 11033;11034 11034 2 9606 Homo sapiens 0.0051775745238273885 EPSNYDFVYDCN Unmodified 1521.5718 0.57182411 1941 Q92556;A4D1X5;B4DJV6;Q92556-3;Q92556-2 ELMO1 Engulfment and cell motility protein 1 yes no 0 0 0 2.5 0.5 1 1 57.717 57.741 2 7.9444E-05 17689 20230619_1881_Aki_TMTPro18x_K_F2 121.5 121.5 50385 44864 47667 52182 56386 63915 60617 58958 70716 53295 51201 49950 63039 51359 51959 63790 57251 62187 46594 41125 48815 52254 58020 63626 61160 60418 70663 54111 53958 50946 63434 53605 53389 63778 54761 59064 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33966000 7223 1941 6833 13733;13734 11035 11035 1 9606 Homo sapiens -0.16809892589185438 EPSPPIDEVINTPR Unmodified 1562.794 0.79403656 2495 B4DII5;B4DWX3;O60684;Q5TFJ7;G1UI19;S4R3E5 KPNA6 Importin subunit alpha;Importin subunit alpha-7 yes no 0 0 0 3 0 1 52.008 52.073 2 7.4856E-09 15064 20230619_1882_Aki_TMTPro18x_K_F3 176.18 104.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7224 2495 6834 13735 11036 11036 1 9606 Homo sapiens 0.03515129818470086 EPSYFEIPTK Unmodified 1209.5918 0.59175492 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B4DL23;B4DS35;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 CEP170;CEP170B Centrosomal protein of 170 kDa;Centrosomal protein of 170 kDa protein B yes no 0 0 0 6 0 1 57.093 57.165 3 0.0018554 16927 20230619_1886_Aki_TMTPro18x_K_F6 73.499 66.46 359980 210610 255860 305860 350790 186480 406690 317650 277670 362740 410020 300010 428290 298540 296010 426600 399520 374780 331480 193870 270120 299530 356590 201140 402620 316980 295770 361950 414420 307970 429790 315090 309760 423310 381080 356610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112500000 7225 1960 6835 13736 11037;11038 11037 2 9606 Homo sapiens -0.0046572879630275565 EPTWNFWK Unmodified 1106.5185 0.5185304 4396 Q96SL4 GPX7 Glutathione peroxidase 7 yes yes 0 0 0 1 0 1 61.928 61.928 2 0.029318 19251 20230619_1880_Aki_TMTPro18x_K_F1 87.639 58.478 47131 40529 40853 43122 44049 62179 57991 54177 67881 56150 59667 55333 64108 52002 62476 62708 75090 75655 43547 37126 42114 43596 46005 61219 57936 55940 68222 56654 61780 56129 65213 54359 64253 63561 71728 71718 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14934000 7226 4396 6836 13737 11039 11039 1 9606 Homo sapiens -0.030468127282347268 EPVEAAPAAEPVPAST Unmodified 1534.7515 0.75150304 3952 Q16740;M0R208 CLPP ATP-dependent Clp protease proteolytic subunit, mitochondrial;ATP-dependent Clp protease proteolytic subunit yes no 0 0 0 1 0 1 49.267 49.267 3 3.7045E-05 14015 20230619_1880_Aki_TMTPro18x_K_F1 78.505 69.761 32198 19156 27094 27465 27769 25239 28838 34207 43622 34217 33606 34918 39526 32951 31088 41624 44431 42685 29683 17629 27950 27033 28818 25902 29480 34308 43186 34614 35206 35363 39768 34520 32553 41714 42371 40537 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50466000 7227 3952 6837 13738 11040 11040 1 9606 Homo sapiens 0.005517346902024656 EPVETAVDNNSK Unmodified 1301.6099 0.60992418 4103 Q6FI81-3;Q6FI81;H3BV90;H3BT65;H3BUG4;B4DHB9;H3BQ23 CIAPIN1 Anamorsin yes no 0 0 0 2.5 0.5 1 1 41.833 41.903 3 1.8283E-05 10673 20230619_1881_Aki_TMTPro18x_K_F2 126.12 109.09 144540 106660 164910 176180 191340 217150 186390 208990 234080 196610 231800 242170 231060 207180 205580 180180 264670 239390 133720 98235 166300 172640 196580 216140 189760 213660 235540 200810 237940 242480 234750 213450 212590 184930 252480 226840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 210930000 7228 4103 6838 13739;13740 11041;11042;11043 11041 3 9606 Homo sapiens -0.028816386122571203 EQADFALEALAK Unmodified 1304.6612 0.66123147 4165 Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43;B3KWH4 MYH14 Myosin-14 yes no 0 0 0 4 0 1 61.09 61.093 3 2.1583E-05 18754 20230619_1883_Aki_TMTPro18x_K_F4 122.46 0 111940 96471 107690 106360 106480 128920 127980 133690 148410 145580 150110 140290 167230 122990 139250 172620 147560 161350 103510 88398 109750 106960 111390 128750 128440 136510 150120 146320 154600 142170 168670 130150 142740 171930 141200 153320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 534060000 7229 4165 6839 13741 11044 11044 1 9606 Homo sapiens 0.021087301524630675 EQADYCVSHMK Oxidation (M) 1382.5595 0.55948529 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 1 0 3.5 0.5 1 1 35.241 35.293 3 0.00027488 7641 20230619_1883_Aki_TMTPro18x_K_F4 97.716 85.797 123120 88754 107910 115630 134370 140970 138190 147850 192760 168580 192680 205350 199500 179250 155220 206860 226810 224890 113650 81517 111330 114900 137650 140780 140780 151070 193200 170430 198000 205910 201430 187180 162850 208280 216310 213420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 215280000 7230 1022;3868 6840 13742;13743 11045;11046 11046 586 2 9606 Homo sapiens -0.11649207533287154 EQADYCVSHMK Unmodified 1366.5646 0.56457067 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4 0.816 1 1 1 40.186 40.249 3 4.3711E-05 9633 20230619_1883_Aki_TMTPro18x_K_F4 133.18 100.68 146630 111760 131150 144840 156140 171960 165690 188040 208130 190500 214620 228320 234970 212900 173120 242380 272660 247560 135410 102620 134990 143920 160560 172160 167850 190960 209840 193570 220790 229600 236420 221600 182980 243190 259740 235170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 260470000 7231 1022;3868 6840 13744;13745;13746 11047;11048 11047 2 9606 Homo sapiens -0.10404903670655585 EQAEAEVASLNR Unmodified 1315.6368 0.63680763 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;D6R904;A0A494C0G0;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4 TPM3;DKFZp686J1372 Tropomyosin alpha-3 chain no no 0 0 0 1.5 0.5 1 1 43.879 43.92 2 1.409E-12 11623 20230619_1881_Aki_TMTPro18x_K_F2 223.77 29.94 449550 315620 350140 482280 435740 561860 535180 475840 675660 565840 538180 597550 648760 512740 476320 633560 635790 607420 414560 290450 366250 473890 449570 559710 537680 494670 674730 568370 563690 602120 650380 538210 497030 632820 606590 577310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 804950000 7232 1095;1096 6841 13747;13748 11049;11050 11050 2 9606 Homo sapiens -0.008385300010559149 EQAEAEVASLNRR Unmodified 1471.7379 0.73791866 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;D6R904;A0A494C0G0;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4 TPM3;DKFZp686J1372 Tropomyosin alpha-3 chain no no 0 0 1 2.5 0.5 1 1 40.14 40.203 3 6.6732E-11 9670 20230619_1882_Aki_TMTPro18x_K_F3 178.51 13.487 200090 183660 188280 186550 248320 214410 221290 227120 247990 240480 229590 191510 242930 176190 210920 249220 227050 190760 185060 168140 193050 188680 252020 215250 225520 231410 250530 240820 236740 196310 245790 186210 216130 245900 216830 181940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 819840000 7233 1095;1096 6842 13749;13750 11051;11052 11052 2 9606 Homo sapiens 0.020919217016626135 EQAELEAAR Unmodified 1015.4934 0.49343786 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 0 1 0 1 35.821 35.821 2 0.0020306 8302 20230619_1880_Aki_TMTPro18x_K_F1 101.66 76.845 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7234 3921 6843 13751 11053 11053 1 9606 Homo sapiens -0.0136891232148173 EQAEQWLK Unmodified 1030.5084 0.50835964 4233 Q8N556-2;Q8N556 AFAP1 Actin filament-associated protein 1 yes no 0 0 0 4 0 1 50.764 50.796 2 0.01305 14345 20230619_1883_Aki_TMTPro18x_K_F4 94.692 60.895 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7235 4233 6844 13752 11054 11054 1 9606 Homo sapiens -0.005674204534898308 EQALAVSR Unmodified 872.47158 0.4715802 1233 A0A140VK65;P21281;Q59HF3;H0YC04;H0YAT8;E5RGH6 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 4.5 0.5 1 1 36.185 36.231 2 0.010019 8003 20230619_1883_Aki_TMTPro18x_K_F4 100.02 39.107 127780 71384 136030 147040 155700 165850 142690 163300 163700 134400 179300 187200 169690 155990 179540 98442 200450 168910 117990 66048 137840 142380 159770 166090 145380 166210 166070 139000 182900 186450 174040 158910 183070 104100 191370 159800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210860000 7236 1233 6845 13753;13754 11055;11056 11055 2 9606 Homo sapiens 0.03024327720618203 EQALQLAQK Unmodified 1027.5662 0.56620887 1360 Q9P2R7;Q9P2R7-2;A0A2R8Y6Y7;Q6N0B1;E5KS55;E5KS60;A0A2R8YDQ9;B4DRV2;B7ZAF6;Q7Z503;B4DY87;A0A0S2Z511;Q5T9Q5;B7Z9S6;Q5T9Q8;A0A0U1RRI1 SUCLA2;DKFZp686D0880 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 7 0 1 47.405 47.493 3 0.0020522 12413 20230619_1887_Aki_TMTPro18x_K_F7 90.108 62.095 208220 185360 202130 222640 286620 273740 273560 271010 359080 230840 214210 193680 253950 200180 218370 272210 240620 188050 192600 169960 207210 222460 290480 272980 279020 275910 354930 234620 228180 198780 256220 210060 224190 267550 229650 179700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132640000 7237 1360 6846 13755 11057;11058 11057 2 9606 Homo sapiens 0.05352841471949432 EQCCYNCGKPGHLAR Unmodified 1848.7818 0.78179086 1099 A0A0S2Z4Q3;A0A0S2Z4K2;P62633-2;P62633-8;P62633-5;P62633;P62633-4;P62633-6;P62633-7;P62633-3 CNBP Cellular nucleic acid-binding protein yes no 0 0 1 7.67 0.471 1 2 33.635 33.659 3;4 6.5313E-14 6932 20230619_1888_Aki_TMTPro18x_K_F8 185.27 174.82 134620 71906 123420 142610 124420 146400 135160 142230 143710 163360 189070 173190 188140 137290 153600 149770 154980 111150 124120 66506 126440 138120 129540 147510 136010 146160 147780 164200 191660 174160 190190 143480 156830 148220 147970 106140 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 709930000 7238 1099 6847 13756;13757;13758 11059;11060;11061 11060 3 9606 Homo sapiens -0.10864876459527295 EQCNPETRPVEK Unmodified 1485.6882 0.68819127 115 A0A024R0X8;Q15649-2;Q15649 ZNHIT3 Zinc finger HIT domain-containing protein 3 yes no 0 0 1 3 0 1 33.866 33.931 3 0.00068678 7161 20230619_1882_Aki_TMTPro18x_K_F3 93.766 84.876 24174 12168 24259 28548 29096 36043 27266 27336 33289 26703 34835 36389 38287 32611 34218 20412 40432 31218 22300 11291 24739 27536 29830 35635 27788 28520 33609 27339 35828 36343 38774 33129 35125 21369 38562 29571 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24186000 7239 115 6848 13759 11062 11062 1 9606 Homo sapiens -0.03522529298675181 EQDDLLVLLADQDQK Unmodified 1741.8734 0.87340909 3285 O60763;O60763-2 USO1 General vesicular transport factor p115 yes no 0 0 0 2.5 0.5 1 1 63.571 63.59 3 2.3396E-05 20231 20230619_1881_Aki_TMTPro18x_K_F2 102.38 87.816 19848 14601 17128 20310 18758 20879 19462 19721 25128 22524 24489 28737 27371 23843 23001 28117 30282 37286 18321 13419 17669 20040 19392 21039 19759 20308 25249 22808 25306 28716 27648 24992 23897 28680 28951 35292 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98712000 7240 3285 6849 13760;13761 11063 11063 1 9606 Homo sapiens 0.032147319819614495 EQDIYLPIANVAR Unmodified 1500.7936 0.79364262 671 F8VSL3;A0A024RBG7;P25208 NFYB Nuclear transcription factor Y subunit beta yes no 0 0 0 6 0 1 59.024 59.09 2 0.001333 17740 20230619_1886_Aki_TMTPro18x_K_F6 126.66 77.562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7241 671 6850 13762 11064 11064 1 9606 Homo sapiens 0.06327754889275639 EQDLQLEELR Unmodified 1271.6357 0.635745 3285 O60763;O60763-2 USO1 General vesicular transport factor p115 yes no 0 0 0 1 0 1 49.755 49.755 2 3.5818E-05 14230 20230619_1880_Aki_TMTPro18x_K_F1 152.27 48.726 95729 79096 99992 107620 101500 123330 115880 112960 128760 143410 133310 141440 151670 123850 138080 158260 142470 164700 88556 72641 101310 106520 105780 123240 116420 116930 130750 143220 137430 143060 153520 130200 141010 158780 136420 156280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 281460000 7242 3285 6851 13763 11065 11065 1 9606 Homo sapiens 0.010792556300202705 EQDQRPLHPVANPHAEISTK Unmodified 2266.1454 0.14544204 4620 Q9NX58 LYAR Cell growth-regulating nucleolar protein yes yes 0 0 1 5 0.816 1 1 1 35.564 35.63 5 6.2951E-11 7769 20230619_1885_Aki_TMTPro18x_K_F5 127.54 105.94 83031 64923 80576 85952 99982 102430 97607 95359 101700 94917 99649 104970 110830 99665 97545 113780 108370 115280 76736 59619 82374 85274 102180 102170 98677 97899 103320 96278 102870 105940 112170 103700 100110 114150 103630 109450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 322830000 7243 4620 6852 13764;13765;13766 11066;11067 11066 2 9606 Homo sapiens 0.0630151405603101 EQDQTLLLK Unmodified 1086.5921 0.59208927 1818 Q7Z460;Q7Z460-3;Q7Z460-5;Q7Z460-4;Q7Z460-2;A0A8V8TLP7;F8WA11;A0A8V8TQK9;A0A8V8TRF6 CLASP1 CLIP-associating protein 1 yes no 0 0 0 4 0 1 51.446 51.473 2 0.0042624 14651 20230619_1883_Aki_TMTPro18x_K_F4 91.584 44.386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7244 1818 6853 13767 11068 11068 1 9606 Homo sapiens 0.05225690923566617 EQDYLCHVYVR Unmodified 1480.6769 0.67689831 1655 A0A7I2V3A1;Q9UES0;A0A7I2V4L6;B5BU81;A4D2J0;A0A7I2V3V7;O15498-2;O15498 YKT6 Synaptobrevin homolog YKT6 yes no 0 0 0 5 0 1 44.759 44.837 3 2.6349E-06 11609 20230619_1885_Aki_TMTPro18x_K_F5 132.76 102.51 46744 28562 41082 41428 39324 47189 46996 53024 64758 54049 54717 53997 60881 43404 51384 57412 51507 53703 43111 26285 42185 40858 41266 47386 47496 53762 64537 54575 56864 54470 61430 45897 52459 57246 49296 51039 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 248600000 7245 1655 6854 13768 11069 11069 1 9606 Homo sapiens -0.04421306602148434 EQEAEPEEQEEDSSSDPR Unmodified 2089.8196 0.8195952 3657 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 0 0 0 1 0 1 34.105 34.105 3 1.1201E-13 7625 20230619_1880_Aki_TMTPro18x_K_F1 150.45 146.2 12683 8091.9 12150 15363 19231 20649 18337 17247 22914 19632 21357 22937 25385 22424 17549 18015 30303 29941 11707 7472.2 12515 14966 19393 20389 18669 17919 23019 19829 22163 23101 25427 22931 18686 18841 28868 28313 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48839000 7246 3657 6855 13769 11070 11070 1 9606 Homo sapiens -0.18172181769023155 EQEDYIR Unmodified 951.42977 0.42977497 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B3KME6;Q6AZE1;H0Y4T4;E7EMW0;E7EWM2;Q96L14;E5RG47;E5RGW7 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 0 0 0 1 0 1 36.589 36.589 2 0.0039932 8601 20230619_1880_Aki_TMTPro18x_K_F1 151.27 74.677 63034 34141 50455 69582 66014 81994 64370 60407 96513 80391 97408 100710 95607 90214 75996 74894 109290 110400 58066 31588 52661 67403 67463 81393 65962 63772 96466 80870 99800 100900 96790 92600 79447 77510 104250 104480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42663000 7247 1960 6856 13770 11071 11071 1 9606 Homo sapiens -0.047882727585715656 EQEEEREAIR Unmodified 1287.6055 0.6055075 2145 A8K9X5;Q9UNN5;Q9UNN5-2;B4DEJ6;B3KT28 FAF1 FAS-associated factor 1 yes no 0 0 1 1 0 1 29.557 29.557 3 5.0994E-07 5826 20230619_1880_Aki_TMTPro18x_K_F1 174.84 113.49 74040 46696 73118 69464 79168 81815 63884 84018 102180 83424 105630 97830 98484 84708 76962 67647 132600 121480 68358 42979 74394 68440 81385 81829 66566 85598 101990 84811 107790 98193 99778 86994 81642 71294 126260 114850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93061000 7248 2145 6857 13771 11072 11072 1 9606 Homo sapiens -0.02679103035143271 EQEELRR Unmodified 958.48321 0.48320752 2614 B4DWI8;Q8WXF1;A0A024RDP4;Q8WXF1-2;A0A0U1RQF9 PSPC1 Paraspeckle component 1 no no 0 0 1 1 0 1 26.886 26.886 3 0.035351 4778 20230619_1880_Aki_TMTPro18x_K_F1 69.105 4.3709 14064 6756.9 16406 15961 24528 24768 15957 21744 18944 12563 21562 29272 17732 19563 24065 9620 23267 23610 12989 6272.6 16583 15459 24586 24290 16701 22163 19208 13697 21897 28587 18546 19960 24233 10662 22272 22275 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17346000 7249 2614 6858 13772 11073 11073 1 9606 Homo sapiens 0.002305247439608138 EQEHMINWVEK Oxidation (M) 1457.6609 0.66091389 2057 Q5QNZ2;Q08ET0;A8K4W2;P24539 ATP5F1;hCG_39985 ATP synthase F(0) complex subunit B1, mitochondrial yes no 0 1 0 3.5 0.5 1 1 44.202 44.26 3 0.0015074 11389 20230619_1883_Aki_TMTPro18x_K_F4 81.494 61.754 111480 80309 112430 124810 160840 142340 144280 155510 173590 157570 179230 165140 159970 147360 148030 137280 197190 191030 103020 73912 114900 122570 162540 142930 147340 157950 175370 159370 182670 166690 163430 152110 153380 141160 188160 180890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118020000 7250 2057 6859 13773;13774 11074 11074 1289 1 9606 Homo sapiens -0.04961012839044088 EQEHMINWVEK Unmodified 1441.666 0.66599927 2057 Q5QNZ2;Q08ET0;A8K4W2;P24539 ATP5F1;hCG_39985 ATP synthase F(0) complex subunit B1, mitochondrial yes no 0 0 0 4.5 0.5 1 1 49.17 49.227 3 0.00036058 13618 20230619_1883_Aki_TMTPro18x_K_F4 97.463 68.164 140250 130120 180620 204590 187640 223100 226150 230440 266200 229880 221050 243920 260920 223530 245350 242170 272630 279960 130100 119660 180430 200620 195410 224210 226990 234880 267090 232840 230870 246210 264350 232300 251240 245200 260640 265480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 399250000 7251 2057 6859 13775;13776 11075 11075 1 9606 Homo sapiens -0.03716708976435257 EQEITAVQAR Unmodified 1143.5884 0.58840088 1989 Q9P2E9;A7BI36;Q9P2E9-3;A1A5C5;A1A5C4;F8W7S5 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 2.5 0.5 1 1 38.609 38.668 2 0.0006486 9046 20230619_1882_Aki_TMTPro18x_K_F3 121.9 92.981 44418 34727 39886 32152 41516 48568 46845 46941 62880 44947 55203 60338 55187 49257 51398 54643 69087 68320 41026 31787 40879 32945 43196 47841 47412 47997 62767 46035 57029 60176 56186 51460 53323 55579 65926 64749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77545000 7252 1989 6860 13777;13778 11076 11076 1 9606 Homo sapiens 0.022350211497041528 EQELDTLK Unmodified 974.49204 0.49204087 3433 P11388;P11388-2;P11388-3;P11388-4 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 2.5 0.5 1 1 47.575 47.653 3 0.0035657 13353 20230619_1881_Aki_TMTPro18x_K_F2 95.608 71.453 82844 63507 80838 85273 75297 96966 74130 78035 126960 97184 99554 96514 112810 88066 75221 104910 104850 92859 76558 58332 82230 84452 78846 96687 76456 81540 125180 97277 103910 97736 112910 92032 78944 104400 99946 88369 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98620000 7253 3433 6861 13779;13780 11077 11077 1 9606 Homo sapiens 0.0037745358976053467 EQEMTEMR Oxidation (M) 1068.4216 0.42159482 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 1 0 1 0 2 30.473 30.473 2 0.026278 5868 20230619_1880_Aki_TMTPro18x_K_F1 76.064 51.141 57380 38993 60062 53057 49127 63475 68889 72691 87396 72219 83483 89066 79924 77588 73467 71823 99775 92463 53022 35840 60605 52589 52512 63563 68897 73585 87744 73542 85712 89227 81472 80085 76255 73440 95159 87630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 62752000 7254 1473 6862 13781;13782 11078;11079 11078 978;979 2 9606 Homo sapiens -0.10987911061874911 EQEPDFEEK Unmodified 1149.4826 0.4825984 2587 E7ERS3;B4DTK7;Q86VM9;B4DZ24;H3BP01 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 0 0 0 1 0 1 44.421 44.421 3 0.0003695 12009 20230619_1880_Aki_TMTPro18x_K_F1 103.87 64.024 40527 23483 33157 38590 37555 42244 33352 37669 47749 40955 43263 48421 52550 40498 39457 57118 57267 51442 37349 21650 34387 37747 38604 42312 34332 38883 47650 41458 45022 48563 52711 42918 41430 56758 54580 48941 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21980000 7255 2587 6863 13783 11080 11080 1 9606 Homo sapiens -0.08616359486427427 EQEPMPTVDSHEPR Unmodified 1650.7308 0.73078437 1969 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2 HN1L Hematological and neurological expressed 1-like protein yes no 0 0 0 1 0 1 36.585 36.585 3 9.5157E-12 8561 20230619_1880_Aki_TMTPro18x_K_F1 177.91 160.44 30546 25666 26195 28114 30920 31038 35299 35191 34485 31252 30492 34260 34443 31962 29622 25612 29776 28281 28216 23519 27055 28246 31836 31274 35306 35555 35021 31885 31674 34534 34813 32699 30191 26014 28478 26839 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79769000 7256 1969 6864 13784 11081 11081 1 9606 Homo sapiens -0.06855178961063757 EQEPTERPLK Unmodified 1225.6303 0.63026569 4430 Q9BTC0;Q9BTC0-2;Q9BTC0-3;Q9BTC0-1 DIDO1 Death-inducer obliterator 1 yes no 0 0 1 3 0 1 35.728 35.785 3 0.047621 7875 20230619_1882_Aki_TMTPro18x_K_F3 57.225 39.065 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7257 4430 6865 13785 11082 11082 1 9606 Homo sapiens 0.02647576838239729 EQESCNMANIR Unmodified 1350.5656 0.5656333 4630 Q9NYH9;B3KX32;B3KQ21;Q9P1J8 UTP6 U3 small nucleolar RNA-associated protein 6 homolog yes no 0 0 0 2 0 1 37.089 37.15 2 0.0024044 8551 20230619_1881_Aki_TMTPro18x_K_F2 114.86 109.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7258 4630 6866 13786 11083 11083 1 9606 Homo sapiens -0.09562689301742466 EQEVNILK Unmodified 971.52876 0.52876073 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5 MYH9 Myosin-9 yes no 0 0 0 4 0 1 48.706 48.744 2 0.090127 13411 20230619_1883_Aki_TMTPro18x_K_F4 69.954 16.482 92587 88396 101420 88377 122670 125180 134600 117050 128060 142440 127110 113070 126540 94126 158340 82390 104220 90583 85770 80903 102550 89821 125890 123680 134770 120790 130920 141670 130440 115360 130500 97211 157030 83716 100150 85999 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54328000 7259 148 6867 13787 11084 11084 1 9606 Homo sapiens 0.041857502063294305 EQEYIRR Unmodified 992.50394 0.50394297 1017 E7EN19;Q53TX8;A0A0D9SEY1;B7Z388;O95819-3;O95819-6;G5E948;V9HWH3;O95819-2;B7Z3V5;O95819;O95819-5;H7C360;O95819-4;E7ENQ1;Q5MD60;E7EX83;H7C0P6;H7C3Z6 MAP4K4;HEL-S-31 Mitogen-activated protein kinase kinase kinase kinase 4 yes no 0 0 1 4 0 1 30.168 30.234 3 0.026652 5669 20230619_1883_Aki_TMTPro18x_K_F4 64.265 15.703 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7260 1017 6868 13788 11085 11085 1 9606 Homo sapiens 0.007391151236220139 EQFASTNIAEELVK Unmodified 1577.7937 0.7937022 2366 B3KNU0;P52306-4;P52306;P52306-5;B7Z4M5;P52306-6;P52306-2;P52306-3;B7Z2V8;Q6U7G8;D6RB97 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes no 0 0 0 5 0 1 60.724 60.774 2 0.0012122 18215 20230619_1885_Aki_TMTPro18x_K_F5 116.54 91.684 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7261 2366 6869 13789 11086 11086 1 9606 Homo sapiens 0.027917100986087462 EQFGNNPFSSLAGNSDSSSSQPLR Unmodified 2525.1419 0.14187281 2631 B4DZF6;Q59F94;Q9NRR5;D3DVA8 UBQLN4 Ubiquilin-4 yes no 0 0 0 6.5 0.5 1 1 58.422 58.481 3 3.235E-63 17184 20230619_1887_Aki_TMTPro18x_K_F7 273.45 268.65 27154 25170 27240 25394 28471 28748 30110 29764 34842 37408 41004 39882 38014 34618 40623 37288 40686 42188 25130 23041 27668 25696 29502 28862 30420 30537 35481 37465 41650 40190 39027 36021 41248 37716 38938 40013 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199810000 7262 2631 6870 13790;13791 11087;11088 11088 2 9606 Homo sapiens -0.059692452991384926 EQFLDGDGWTSR Unmodified 1409.6212 0.62115757 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;B4DHR1;K7EJB9 CALR;HEL-S-99n Calreticulin yes no 0 0 0 3 0.816 1 1 1 54.373 54.402 2 1.2895E-23 16305 20230619_1881_Aki_TMTPro18x_K_F2 249.83 205.72 243960 199620 237440 241530 251780 312850 285020 297390 392780 311930 316430 326720 305680 290210 341110 331630 295070 321740 225540 183110 242050 241450 261760 310490 288720 305150 390750 315110 327930 329750 314190 302590 343660 332120 282950 305600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2092199999.9999998 7263 1691 6871 13792;13793;13794 11089;11090;11091 11089 3 9606 Homo sapiens -0.06726816518107626 EQFNEFR Unmodified 968.43519 0.4351947 3928 V9HW95;Q15293;Q15293-2;Q5J7V8 HEL-S-84;RCN1 Reticulocalbin-1 yes no 0 0 0 2.5 0.5 1 1 43.4 43.475 2 0.023847 11125 20230619_1882_Aki_TMTPro18x_K_F3 105.14 83.982 188100 167550 181390 219740 353420 359170 314340 280330 380350 263130 314190 312930 276050 223820 295820 300540 287420 277610 173980 153770 187680 219280 352270 350810 320900 291360 380710 268630 323850 312490 283830 237830 300030 299510 275010 263950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210710000 7264 3928 6872 13795;13796 11092 11092 1 9606 Homo sapiens -0.05028549176086017 EQFVEFR Unmodified 953.46068 0.46068117 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-2;O43852-4;A0A024R755;B3KNG6;O43852-15;H0Y875;B3KQK3 CALU Calumenin yes no 0 0 0 3.5 0.5 1 1 48.577 48.635 2 0.073029 13534 20230619_1882_Aki_TMTPro18x_K_F3 80.684 46.606 670650 528940 514210 638350 620890 767570 702470 697530 932230 754730 789750 855000 851730 659410 856420 836030 856930 993350 618790 485250 537890 637200 640110 764550 710310 718960 930510 763090 820250 856620 867150 696520 870730 846100 820840 941320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 754120000 7265 2386 6873 13797;13798 11093 11093 1 9606 Homo sapiens -0.017910746536585975 EQFWEQAK Unmodified 1064.4927 0.49270958 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;B3KSQ7 DBN1 Drebrin yes no 0 0 0 4.8 0.748 2 2 1 51.572 51.628 2;3 0.0057078 14718 20230619_1883_Aki_TMTPro18x_K_F4 122.28 85.886 440500 395270 415360 422030 423920 504080 460570 425340 515750 505160 504380 482270 557400 437210 509040 498160 521970 542240 407370 362040 424240 425220 441010 501780 463960 442170 521990 505700 520230 489090 564620 456010 519130 502160 499430 514480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1140600000 7266 1396 6874 13799;13800;13801;13802;13803 11094;11095 11094 2 9606 Homo sapiens -0.036957069705295 EQGITLR Unmodified 815.45012 0.45011648 3845 Q13257;A0A0S2Z414;Q13257-2;D6RJE3 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes no 0 0 0 4.5 0.5 1 1 38.85 38.916 2 0.016376 9099 20230619_1883_Aki_TMTPro18x_K_F4 110.03 35.61 570810 416240 506830 488080 497360 559420 492630 467080 616380 586090 649070 564590 687620 545340 501960 686170 719420 558670 526960 381870 519840 488060 517700 558260 500980 486810 622210 585570 665230 573990 691660 570620 526650 679660 685120 532570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 544640000 7267 3845 6875 13804;13805 11096;11097 11096 2 9606 Homo sapiens 0.035009426919032194 EQGNAYYAK Unmodified 1042.472 0.47197413 1609 Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;K7EIH8;K7EK03;K7ESP1;K7ELJ8 DNAJC7 DnaJ homolog subfamily C member 7 yes no 0 0 0 4.5 0.5 1 1 39.697 39.763 2 0.0027824 9396 20230619_1885_Aki_TMTPro18x_K_F5 111.65 70.665 34962 19618 51416 52422 71535 94133 58065 71391 60704 48075 77101 84352 67329 73804 67184 25795 88024 77058 32391 18240 51191 50700 72423 91370 59463 73826 62273 50967 77961 83533 69136 73919 69225 29719 83943 72687 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44884000 7268 1609 6876 13806;13807 11098 11098 1 9606 Homo sapiens -0.047562973502181194 EQGNIEEAVR Unmodified 1143.552 0.55201537 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 0 1 0 1 38.089 38.089 2 3.3408E-16 9237 20230619_1880_Aki_TMTPro18x_K_F1 185.08 137.23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7269 1842 6877 13808 11099 11099 1 9606 Homo sapiens -0.01401855747008085 EQGPTHGHGWDHGK Unmodified 1541.676 0.6759871 2773 CON__P01044-1;CON__Q2KJ62;CON__P01045-1 yes no 0 0 0 4 0.816 1 1 1 28.88 28.963 5 0.00057756 5139 20230619_1883_Aki_TMTPro18x_K_F4 91.207 72.843 + 19755 12374 22211 19498 23872 28783 24413 22720 32013 75559 133080 186400 97466 114530 109870 129150 180050 224400 18259 11397 22371 19219 24703 28258 24892 25092 36220 76775 130590 181580 101460 121200 115500 134780 171900 211970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114420000 7270 2773 6878 13809;13810;13811 11100;11101 11100 2 -0.07318384926838917 EQGPYETYEGSPVSK Unmodified 1669.7471 0.74714594 2555 B4DNN4;Q53GZ5;P23921;B4E0I8;E9PL69;B4DXB0;B4DS95;B4DXD1 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 0 0 0 4 0.816 1 1 1 47.086 47.147 3 8.8194E-06 12683 20230619_1883_Aki_TMTPro18x_K_F4 114.27 95.862 127880 98926 123570 142970 111220 138560 129050 139600 140000 159040 174060 154960 185980 139860 139820 154500 170510 177900 118180 90938 125830 140650 117120 140390 129520 143060 143440 159520 177320 157030 187110 145680 144760 156290 162900 168700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363340000 7271 2555 6879 13812;13813;13814 11102;11103 11102 2 9606 Homo sapiens -0.060937745233559326 EQGQAPITPQQGQALAK Unmodified 1763.9166 0.91661131 3768 Q6ICQ8;P84095 ARHG;RHOG Rho-related GTP-binding protein RhoG yes no 0 0 0 6.5 0.5 1 1 45.559 45.646 3 0.00020666 11956 20230619_1886_Aki_TMTPro18x_K_F6 84.375 62.177 57983 47869 50492 63484 56392 64377 61197 58254 76822 72846 75164 77625 82360 66239 71138 80507 83103 81530 53561 43950 52086 62809 58295 64882 61895 60350 77316 73002 77518 78192 83279 69475 73245 80705 79386 77433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218580000 7272 3768 6880 13815;13816 11104 11104 1 9606 Homo sapiens 0.06520966549874174 EQGQNLAR Unmodified 914.45699 0.45699277 655;2153 P61224;P61224-3;A0A024RB87;F5H7Y6;E7ESV4;F5GX62;A6NIZ1;P61224-4;P61224-2;B7ZB78;Q5U0C3;F5GZG1;F5H823;B7ZAY2;A8KAH9;P62834 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1b-like protein;Ras-related protein Rap-1A no no 0 0 0 2 0.816 1 1 1 28.594 28.656 2 0.010318 5045 20230619_1882_Aki_TMTPro18x_K_F3 99.136 73.196 21181 11746 29698 33099 54519 45756 35610 50764 39147 25057 41562 56609 35209 35356 48160 14008 55544 51708 19611 10935 29834 31796 54022 45404 37149 50784 39729 27643 42382 55228 36796 36051 48954 16643 53046 48727 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 28239000 7273 655;2153 6881 13817;13818;13819 11105;11106 11106 2 9606 Homo sapiens -0.0036574442754044867 EQGVLSFWR Unmodified 1120.5665 0.56654322 3439;3388 P05141;Q6NVC0;P12236;Q6I9V5;Q59EI9 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 0 0 1.5 0.5 1 1 59.786 59.793 2 8.6728E-06 18377 20230619_1880_Aki_TMTPro18x_K_F1 176.38 103.9 958250 873910 905560 956820 948870 1205800 1157300 1202900 1340400 726140 614140 519090 653870 529880 915760 659030 658070 531250 886300 800570 925610 963120 989260 1199900 1159900 1215800 1324400 754210 666140 537470 678480 553210 910900 653960 631250 506400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1711299999.9999998 7274 3388;3439 6882 13820;13821 11107;11108 11107 2 9606 Homo sapiens 0.011082611918027396 EQGVTFPSGDIQEQLIR Unmodified 1915.964 0.96395543 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 4.5 0.5 2 2 58.553 58.583 2;3 9.097199999999999E-38 17707 20230619_1883_Aki_TMTPro18x_K_F4 306.27 224.1 93253 78884 74243 77956 59001 71277 94226 72177 90749 103410 114650 106380 111440 95697 103240 132470 112830 114980 86101 72221 76815 78778 63498 72651 92824 74591 93602 102910 116320 107570 113450 100980 105820 131460 107870 109380 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 833100000 7275 3606 6883 13822;13823;13824;13825 11109;11110;11111 11109 3 9606 Homo sapiens 0.04261201030271877 EQHGVAASCLEDLR Unmodified 1583.7362 0.7362041 296 A0A024R4H5;Q53HN4;O00273-2;O00273;K7ERT1 DFFA DNA fragmentation factor subunit alpha yes no 0 0 0 2.5 0.5 1 1 41.268 41.336 3 1.0556E-28 10154 20230619_1882_Aki_TMTPro18x_K_F3 244.05 204.32 126360 73178 124880 127670 146850 156520 142380 144380 152680 126170 143330 142660 144960 120920 136050 141820 149850 155760 116610 67522 127320 124750 150630 155720 144160 147840 154520 129030 147580 143380 147470 126580 139300 142950 143290 147770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 311890000 7276 296 6884 13826;13827 11112;11113 11113 2 9606 Homo sapiens -0.03231455378613646 EQHIAECMAK Oxidation (M) 1231.5325 0.53254226 4262 Q8TAE8;Q7LAX7 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes no 0 1 0 3 0 1 32.99 33.061 3 0.0021738 6784 20230619_1882_Aki_TMTPro18x_K_F3 78.692 70.204 14907 7667.7 14653 17916 22130 16452 18376 23981 28062 17683 24945 24659 21668 17371 15386 20594 25802 24712 13750 7113.7 15028 17217 22249 16919 19051 23796 27871 18424 25578 24481 21924 18335 16359 20858 24579 23432 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18626000 7277 4262 6885 13828 11114 11114 2713 1 9606 Homo sapiens -0.07396271353786688 EQHPDMSVTK Oxidation (M) 1186.5288 0.52883709 3431;931 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;P11171-5;Q4VB87;Q29RX4;A0A3B3ITP0;A0A2R8Y7Y3;P11171-6;B7Z5L2;B7Z627;Q9Y2J2;Q9Y2J2-2;A0A0A0MSA4;A0A0A0MRA8;A8K968;B3KY28;B3KT50;B7Z2D7;B7Z2G3;B7Z8M8;B7Z338 EPB41;EPB41L3 Protein 4.1;Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 1 0 2.5 0.5 1 1 31.6 31.67 3 0.0016605 6225 20230619_1882_Aki_TMTPro18x_K_F3 84.169 59.787 63626 28606 64069 62045 71294 62506 63552 65082 81856 64789 75895 72337 75077 64487 59534 56861 87741 84447 58671 26526 65113 59874 73175 63215 65114 66310 82066 65756 78062 72812 75943 66420 62346 58818 83655 79928 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 43327000 7278 3431;931 6886 13829;13830 11115;11116 11116 529 2 9606 Homo sapiens -0.05696617855983277 EQHPDMSVTK Unmodified 1170.5339 0.53392246 3431;931 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;P11171-5;Q4VB87;Q29RX4;A0A3B3ITP0;A0A2R8Y7Y3;P11171-6;B7Z5L2;B7Z627;Q9Y2J2;Q9Y2J2-2;A0A0A0MSA4;A0A0A0MRA8;A8K968;B3KY28;B3KT50;B7Z2D7;B7Z2G3;B7Z8M8;B7Z338 EPB41;EPB41L3 Protein 4.1;Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 3 0 1 36.801 36.856 3 6.905E-07 8311 20230619_1882_Aki_TMTPro18x_K_F3 148.78 111.6 76060 32963 72415 67669 76916 73934 69582 68327 96916 84163 97830 90836 83330 73099 78696 82464 104740 94686 70096 30545 73877 65524 79315 74134 71451 70623 97168 84445 99628 91314 85329 76491 81558 83395 99893 89840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60008000 7279 3431;931 6886 13831 11117 11117 1 9606 Homo sapiens -0.04452313993374446 EQHVQDIIPINSHFR Unmodified 1831.9329 0.93293007 1391 Q504W7;A0A2X0TVZ9;Q01968-2;Q01968;A0A8I5KTM3;A0A2R8YF88;Q6PJ10 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes no 0 0 0 7 0 1 45.467 45.553 4 0.00026456 11532 20230619_1887_Aki_TMTPro18x_K_F7 93.51 74.115 89904 71698 83656 93352 105770 115620 100180 107560 122830 101870 103310 99447 111560 88638 99178 116360 116550 104480 83071 65824 85890 92766 108000 115030 102040 110240 123050 103230 107240 100760 112990 93270 102120 115770 111270 99402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89158000 7280 1391 6887 13832 11118 11118 1 9606 Homo sapiens 0.05024092506641864 EQIDIFEGIK Unmodified 1190.6183 0.61830402 4365 Q96I99;Q3ZCW5;E9PDQ8;Q96I99-2;B7Z2D5;Q9Y436;H0Y852 SUCLG2;DKFZp586M2023 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 4 0.816 1 1 1 61.737 61.764 3 0.00033586 19059 20230619_1883_Aki_TMTPro18x_K_F4 99.215 49.715 53578 45748 49989 50959 55300 66710 55812 59739 70985 42880 51476 51278 54327 40624 60700 58606 55544 62354 49528 41925 51171 51255 57113 66091 56714 61046 70582 44545 53877 51368 55627 43234 61318 58814 53241 59160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158870000 7281 4365 6888 13833;13834;13835 11119 11119 1 9606 Homo sapiens 0.03061960095055838 EQIDNLATELCR Unmodified 1460.6929 0.6929423 3353 O95295 SNAPIN SNARE-associated protein Snapin yes yes 0 0 0 3 0 1 55.065 55.106 2 5.0441E-13 16400 20230619_1882_Aki_TMTPro18x_K_F3 211.37 165.37 37885 29086 33692 42210 33122 41664 34820 36218 46618 43639 41306 41077 41596 38563 41308 50964 46471 48754 34986 26740 34619 41511 34568 42024 35382 37583 46618 43645 42644 41745 42463 40504 42350 50861 44429 46322 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13790000 7282 3353 6889 13836 11120 11120 1 9606 Homo sapiens -0.018976451558728513 EQIEHLHR Unmodified 1060.5414 0.5413911 4288 Q8WXH0-2;Q8WXH0;A0A0C4DGK3;Q8WXH0-7;Q7Z362;Q8WXH0-13;G3V4T3;G3V3D4 SYNE2;DKFZp686J1895 Nesprin-2 yes no 0 0 0 3 0 1 29.138 29.24 3 0.0013245 5330 20230619_1882_Aki_TMTPro18x_K_F3 115.71 71.907 8508.2 8811.4 10401 12576 20404 18122 15902 16902 19752 11699 18707 15681 15608 13126 15582 13378 17633 15197 7894.9 8090.6 10569 12455 20246 17881 16408 17206 19828 12238 19086 15671 16027 13637 15945 13550 16834 14424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9151100 7283 4288 6890 13837 11121 11121 1 9606 Homo sapiens 0.013542063892145961 EQILEEFSK Unmodified 1121.5605 0.56045479 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2V5Q6;A0A7I2YQV8;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 3.5 1.2 3 2 2 3 59.297 59.322 2;3 9.2985E-07 18015 20230619_1883_Aki_TMTPro18x_K_F4 212.21 115.27 962210 836060 860130 937710 936430 1081200 989560 981540 1228700 1215100 1159900 1093400 1217200 1029900 1080400 1317700 1202500 1273500 889290 766190 883910 940670 969060 1080300 1002000 1015700 1235900 1212100 1195200 1113800 1234000 1079900 1109200 1316300 1149800 1209700 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1845599999.9999998 7284 1680;2265 6891 13838;13839;13840;13841;13842;13843;13844;13845;13846;13847 11122;11123;11124;11125;11126;11127 11124 6 9606 Homo sapiens 0.0045369816962193 EQILGDEAR Unmodified 1029.5091 0.50908792 1401 Q13724;A0A384MDR6;Q58F09;Q13724-2;A0A8I5KTK5;A0A3B3IRK6;A0A3B3IRW2;A8K9K4;A0A3B3IS52 MOGS;GCS1 Mannosyl-oligosaccharide glucosidase yes no 0 0 0 1 0 1 40.939 40.939 2 7.0881E-05 10498 20230619_1880_Aki_TMTPro18x_K_F1 160.36 97.815 152590 118450 127190 156850 189630 214650 181040 189700 244710 186820 231280 240350 209260 184880 216550 224380 235540 230980 140860 108780 132460 155910 192020 212030 184940 195400 244910 190700 237030 239720 214690 194550 221170 225210 225140 219330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130810000 7285 1401 6892 13848 11128 11128 1 9606 Homo sapiens -0.00448625804438052 EQIQNQLDHLK Unmodified 1364.7048 0.70482762 1032 A0A0G2JIZ4;Q59EC6;A0A1U9X8R9;P14373-2;P14373 TRIM27 Zinc finger protein RFP yes no 0 0 0 5 0 1 48.39 48.467 3 0.01467 13085 20230619_1885_Aki_TMTPro18x_K_F5 65.329 46.058 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7286 1032 6893 13849 11129 11129 1 9606 Homo sapiens 0.037063396496023415 EQIREDILENQFMDSR Oxidation (M) 2037.9426 0.94256806 1487 P28161;A0A384P5E9;P28161-2;F6XZQ7;Q0D2I8;E9PHN6;A8HT81;E9PHN7;E9PLF1;Q9UE37 GSTM2;GSTmu3 Glutathione S-transferase Mu 2 yes no 0 1 1 2.5 0.5 1 1 50.818 50.879 3 0.00061359 14837 20230619_1881_Aki_TMTPro18x_K_F2 83.849 70.222 130510 115100 121740 145210 149030 152870 140960 149140 158060 148130 160980 178910 162580 149490 159560 169590 180870 212660 120670 105590 124930 144240 152360 153940 143160 152600 160180 150690 165240 179200 165830 156230 163550 172470 173070 201410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 227730000 7287 1487 6894 13850;13851 11130 11130 990 1 9606 Homo sapiens -0.03488552060798611 EQIREDILENQFMDSR Unmodified 2021.9477 0.94765344 1487 P28161;A0A384P5E9;P28161-2;F6XZQ7;Q0D2I8;E9PHN6;A8HT81;E9PHN7;E9PLF1;Q9UE37 GSTM2;GSTmu3 Glutathione S-transferase Mu 2 yes no 0 0 1 3 0.816 1 1 1 54.965 54.991 3 9.1106E-34 16593 20230619_1881_Aki_TMTPro18x_K_F2 254.58 239.42 230520 189670 225040 247300 224230 292670 258760 268370 309670 248430 269370 302950 276430 284480 311470 304210 332870 384670 213120 174120 229250 245550 234330 291780 260490 275310 310780 253950 278930 304430 283970 294980 317260 309900 318640 364320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 289580000 7288 1487 6894 13852;13853;13854 11131;11132;11133 11131 3 9606 Homo sapiens -0.0224424819818978 EQISDIDDAVR Unmodified 1259.5994 0.59935949 3649 Q6IBA2;Q59G24;P53999;Q6E433 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes no 0 0 0 1.5 0.5 2 2 46.66 46.699 2;3 1.823E-17 12888 20230619_1881_Aki_TMTPro18x_K_F2 240.45 195.37 310610 250740 267570 318130 313780 328770 342360 326660 404320 355310 355960 338410 408820 316620 317190 426700 388190 347710 286860 230130 276390 315820 323060 331640 345330 334690 406430 357170 369590 343810 411080 333180 328660 422300 370450 331240 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2762000000 7289 3649 6895 13855;13856;13857;13858 11134;11135;11136 11136 3 9606 Homo sapiens -0.02005621266698654 EQITLPEQAK Unmodified 1155.6136 0.61355299 3336 O94888;C9JAT7 UBXN7 UBX domain-containing protein 7 yes no 0 0 0 4 0 1 48.258 48.298 2 1.0606E-06 13185 20230619_1883_Aki_TMTPro18x_K_F4 137.98 104.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7290 3336 6896 13859 11137 11137 1 9606 Homo sapiens 0.0419707595226555 EQIVPKPEEEVAQK Unmodified 1622.8516 0.85155143 188 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;P18621-3;J3QLC8;A0A0A0MRF8;P18621-2 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 yes no 0 0 1 3.33 0.745 1 2 3 46.611 46.675 3;4 7.6647E-07 12926 20230619_1881_Aki_TMTPro18x_K_F2 134.25 122.33 420630 329190 374650 410680 373850 464050 421130 406110 482130 506500 497460 456480 563630 440010 413500 626070 545410 572290 388490 302100 384680 408680 390240 463750 423800 421580 488590 505060 512110 465540 565860 464450 431590 622440 520750 544030 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2567200000 7291 188 6897 13860;13861;13862;13863;13864;13865 11138;11139;11140;11141;11142 11138 5 9606 Homo sapiens 0.06503972024029281 EQIVVDLSHPGVSEDDQVSR Unmodified 2208.0659 0.065854319 3284 O60701;O60701-3;O60701-2;Q9NQ82 UGDH;GDH UDP-glucose 6-dehydrogenase yes no 0 0 0 1.5 0.5 1 1 51.544 51.567 3 9.3612E-55 15146 20230619_1881_Aki_TMTPro18x_K_F2 269.08 246.99 78071 65416 67840 72961 69952 92382 81467 76267 82734 74339 83293 82166 80656 69229 76379 89926 85549 93947 72122 59955 69852 73322 72934 91548 81508 78992 84198 75494 85318 82662 82211 72933 78329 90215 81823 89158 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 179590000 7292 3284 6898 13866;13867 11143;11144 11144 2 9606 Homo sapiens 0.010144025913177757 EQIYDVYR Unmodified 1084.5189 0.51892433 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 46.674 46.735 2 0.012143 12641 20230619_1882_Aki_TMTPro18x_K_F3 96.034 68.151 851290 597580 982570 997920 1221100 1097600 1154500 1133900 1161900 1009300 1200300 829280 726330 622460 1160600 576580 793770 518630 787470 550560 990640 975780 1245000 1103200 1168300 1152500 1183900 1021200 1207200 843580 776440 646530 1148900 579060 761110 494220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 571080000 7293 543 6899 13868;13869 11145 11145 1 9606 Homo sapiens -0.019954377990416106 EQLAAIFK Unmodified 918.51747 0.51746776 1537 A0A481SVA1;P84157;A0A481SVJ4;A0A481SVD9;A0A481SU50;A0A481SVT9 MXRA7 Matrix-remodeling-associated protein 7 yes no 0 0 0 1 0 1 59.023 59.023 2 0.018728 18068 20230619_1880_Aki_TMTPro18x_K_F1 97.431 32.178 128260 118970 109200 113660 92894 128180 129470 131540 187940 98306 93450 72593 81999 70664 143140 88576 103500 83593 118550 108860 112340 115520 99117 128580 130150 133230 184050 100540 99798 74897 86982 73923 141980 88623 99278 79523 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99774000 7294 1537 6900 13870 11146 11146 1 9606 Homo sapiens 0.054949729028635375 EQLAIAEFAR Unmodified 1146.6033 0.60332266 3470 P17987;E7EQR6;F5H282 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 5 0.816 1 1 1 54.604 54.657 2 9.0606E-05 16031 20230619_1883_Aki_TMTPro18x_K_F4 143.5 109.25 574780 471120 486230 563120 503110 592190 533060 538140 721240 658390 603790 617470 671590 533020 605560 721630 613900 660550 530810 432100 502020 561460 522920 595390 541520 556750 719550 657930 628030 625840 679920 562720 618070 718380 587620 627870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2238700000 7295 3470 6901 13871;13872;13873 11147;11148 11147 2 9606 Homo sapiens 0.035885130176893654 EQLAQAMFDHIPVGVGSK Oxidation (M) 1941.9618 0.96184694 4728 Q9Y3I0;B4DNA0;B4DNG5 RTCB tRNA-splicing ligase RtcB homolog yes no 0 1 0 7 0 1 53.737 53.804 3 4.1608E-05 15258 20230619_1887_Aki_TMTPro18x_K_F7 92.31 77.056 44274 37851 39062 46181 46281 44462 48624 42248 51565 46773 59584 50091 51994 48006 52913 55422 50377 54340 40911 34717 40260 45925 47519 45066 48972 43469 52647 47147 60366 50685 53363 49960 53668 55513 48252 51610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125600000 7296 4728 6902 13874 11149 11149 2881 1 9606 Homo sapiens 0.028544490207423223 EQLAQAVAR Unmodified 984.53524 0.53524309 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;Q6ZS03;B4DKR8;H7C0A4;Q5HYC5 HDLBP;DKFZp686L08115 Vigilin yes no 0 0 0 6 0 1 40.641 40.733 2 0.0026976 9814 20230619_1886_Aki_TMTPro18x_K_F6 104.01 35.79 160940 140320 155770 161620 181830 207710 176820 174840 238870 192140 199680 179170 201280 161820 174180 227290 234720 190850 148840 128630 159100 162080 186850 205790 180460 181320 238160 193010 206600 182050 204120 170960 181210 225160 223690 181810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225460000 7297 292 6903 13875 11150 11150 1 9606 Homo sapiens 0.042356881577120475 EQLDMAGAR Oxidation (M) 1005.4549 0.45494386 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;Q59F36 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 1 0 2 0 1 33.002 33.06 2 0.084965 6911 20230619_1881_Aki_TMTPro18x_K_F2 57.108 37.837 27859 21158 26998 27708 37342 37532 28886 32531 45444 34776 41819 44759 36299 29632 40201 29691 46324 40458 25743 19430 27648 27567 37750 37098 30133 33625 45178 35346 42856 44438 37407 31082 41085 30474 44222 38334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21354000 7298 1717 6904 13876 11151 11151 1119 1 9606 Homo sapiens -0.04756541227629896 EQLDMAGAR Unmodified 989.46003 0.46002924 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;Q59F36 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 0 0 2.5 0.5 1 1 39.162 39.223 2 0.019466 9453 20230619_1881_Aki_TMTPro18x_K_F2 85.764 66.661 151300 137370 141700 144600 138950 168230 170380 156850 236910 161860 173720 178660 195110 165610 177800 194470 206990 197880 139930 125800 144750 145820 145640 168080 171930 161200 234810 164030 182170 180210 197690 172790 182800 195120 197700 187950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 95634000 7299 1717 6904 13877;13878 11152 11152 1 9606 Homo sapiens -0.03512237365021065 EQLDNQLDAYMSK Unmodified 1553.7032 0.70317264 4732 X6R700;Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3 CHTOP Chromatin target of PRMT1 protein yes no 0 0 0 4.5 0.5 1 1 58.039 58.095 3 0.00075166 17546 20230619_1883_Aki_TMTPro18x_K_F4 98.253 78.93 52180 49138 54854 53626 42389 53899 61015 59327 64569 68248 69464 67829 69692 63367 64586 77424 68098 72174 48316 45009 55321 53830 45555 54608 60565 60474 65780 68472 71043 68747 70904 66231 66034 77251 65150 68592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53996000 7300 4732 6905 13879;13880 11153;11154 11153 2 9606 Homo sapiens -0.05153082221318073 EQLDPDELETITMHK Unmodified 1797.8455 0.84547978 2154 A8KAK1;Q9NYU2-2;Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 3 0 1 57.288 57.32 3 9.8643E-08 17325 20230619_1882_Aki_TMTPro18x_K_F3 130.56 92.534 87681 85837 90958 83654 94841 118000 112240 109550 127100 78668 74725 75224 88115 66589 98086 83598 86635 88156 81201 78539 92174 85187 98771 116520 112570 111640 126420 81147 79774 76268 89937 69929 98850 84036 83013 83677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116800000 7301 2154 6906 13881 11155 11155 1 9606 Homo sapiens -0.021529142698000214 EQLDSSNSTIAILQTEK Unmodified 1875.9426 0.94255129 3285 O60763;O60763-2 USO1 General vesicular transport factor p115 yes no 0 0 0 4 0.816 1 1 1 57.18 57.212 3 0.00071363 17202 20230619_1883_Aki_TMTPro18x_K_F4 72.359 59.732 73880 59831 74982 86586 77380 98392 89531 84454 106140 104370 90250 110160 121590 95427 79940 140970 123740 135700 68319 54991 76208 85344 80626 98220 90058 87796 106630 104610 94806 111060 121130 101360 84779 140430 118050 128900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 377250000 7302 3285 6907 13882;13883;13884 11156 11156 1 9606 Homo sapiens 0.03961771210902043 EQLEEEEEAK Unmodified 1232.5408 0.54084156 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5 MYH9 Myosin-9 yes no 0 0 0 1 0 1 42.664 42.664 2 1.9884E-13 11258 20230619_1880_Aki_TMTPro18x_K_F1 220.17 156.64 59099 27341 67630 70985 85704 116850 87760 93224 108580 89731 120460 142100 119830 106360 101530 57476 137900 129850 54564 25435 68325 68587 87826 113970 89016 96743 109810 92500 123120 140460 121490 108370 105300 62758 131530 122590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60851000 7303 148 6908 13885 11157 11157 1 9606 Homo sapiens -0.06612722631803081 EQLEHIK Unmodified 895.47633 0.47633123 2025 B5BU52;B2R6Q4;A8K3B6;P41240;B4DMZ0;B4DP99;Q53EL3 CSK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase CSK yes no 0 0 0 4 0 1 39.212 39.254 3 0.013449 9241 20230619_1883_Aki_TMTPro18x_K_F4 87.308 12.669 83696 58319 86023 84474 100030 105830 89454 93985 136290 109050 128380 126280 120590 103630 110460 87656 142240 129210 77337 53635 87378 83417 102560 105110 92269 97215 135780 110000 131700 126570 122880 106860 114110 90755 135700 122330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110010000 7304 2025 6909 13886 11158 11158 1 9606 Homo sapiens 0.02441211863379067 EQLFHEMIR Oxidation (M) 1217.5863 0.58629239 2557 B4DNR6 yes yes 0 1 0 1.5 0.5 1 1 44.485 44.526 2 0.084642 11936 20230619_1881_Aki_TMTPro18x_K_F2 57.177 15.675 59465 41102 51064 70326 117460 127870 107110 99935 132050 75690 94907 98063 88182 79210 88580 105140 107280 106360 54868 37883 53719 69263 116510 124220 109220 103350 131440 78607 98858 97972 90306 83662 91192 105260 102460 101010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124210000 7305 2557 6910 13887;13888 11159 11159 1552 1 9606 Homo sapiens -0.01379730859753181 EQLGEEIDSK Unmodified 1146.5404 0.54044763 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9;Q8NI92 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 yes no 0 0 0 1.5 0.5 2 2 46.932 46.97 2;3 5.5561E-19 13043 20230619_1881_Aki_TMTPro18x_K_F2 243.82 148 339290 276990 321980 330350 338840 359950 375730 366260 470190 480380 442850 416910 495430 356190 337500 575600 503750 429580 313590 254050 328820 329720 351660 361980 379590 376720 472820 477430 457530 424350 496220 381150 356450 565980 479860 409840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 675700000 7306 1748 6911 13889;13890;13891;13892 11160;11161 11161 2 9606 Homo sapiens -0.026960975610109017 EQLGYIVFSGPR Unmodified 1364.7089 0.70885036 1507 P14735;A0A7I2V610;A0A3B3ISG5;A0A7I2V2P6;A0A7I2V3E3;Q59GA5;P14735-2;B3KSB8;B7Z7W6;A0A7I2V3K9 IDE Insulin-degrading enzyme yes no 0 0 0 1 0 1 59.024 59.024 2 0.0006991 18089 20230619_1880_Aki_TMTPro18x_K_F1 120.03 72.21 35873 30885 32185 37094 36423 36092 36198 41599 43356 38706 39263 38153 43967 33079 39406 43556 45707 48065 33154 28323 33088 36944 37477 36713 36747 42026 43602 39252 40674 38605 44486 34875 40521 43837 43687 45596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39924000 7307 1507 6912 13893 11162 11162 1 9606 Homo sapiens 0.041084291432980535 EQLIIPQVPLFNILAK Unmodified 1835.0921 0.092056477 2722 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;Q53GS9-3;Q53GS9-2;B3KPG7;B3KMG1 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 0 0 0 4.5 0.5 1 1 66.629 66.657 3 0.013312 21067 20230619_1883_Aki_TMTPro18x_K_F4 60.474 44.935 5760.2 4469.4 5378.2 4650 4430.1 4973.6 3299 5777.8 4411 5066.1 7237 5103.3 5108.5 4521.3 6813.9 5492.4 5745.5 4481.7 5321.7 4094.9 5473.9 4691.2 4651 5024.8 3440.5 5820 4541.6 5155.1 7186.3 5169.8 5360.5 4731.8 6832.4 5452.6 5498.8 4272.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82491000 7308 2722 6913 13894;13895 11163 11163 1 9606 Homo sapiens 0.20791413082088184 EQLLQSNPVLEAFGNAK Unmodified 1856.9632 0.96322715 2174 E9PDF6;B0I1S9;O43795-2;O43795;E7EQD9;Q05CR5;C9JYW1;Q14777 MYO1B Unconventional myosin-Ib no no 0 0 0 8 0 1 63.374 63.397 3 2.0141E-13 19267 20230619_1888_Aki_TMTPro18x_K_F8 151.48 136.1 81103 66415 78296 88018 76100 92978 93175 89914 93508 86812 95621 92712 105880 80648 85290 111860 89734 102660 74973 60979 79814 87159 79732 93535 92972 92009 95305 88085 98427 93520 106690 85265 87491 111310 85904 97554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 303880000 7309 2174 6914 13896 11164 11164 1 9606 Homo sapiens 0.06902406381186665 EQLMASDDFGR Oxidation (M) 1283.5452 0.54521543 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 1 0 1.5 0.5 1 1 42.914 42.955 2 0.00076458 11415 20230619_1880_Aki_TMTPro18x_K_F1 104.07 92.477 129910 85781 103710 127320 135270 130380 135080 135120 192330 152800 174110 182730 186710 163100 134810 210100 204110 218790 119780 78933 108130 125140 138030 131730 137920 138200 191840 154480 180010 183570 187810 171350 142240 210620 194720 207660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 208610000 7310 1022;3868 6915 13897;13898 11165;11166 11165 587 2 9606 Homo sapiens -0.08521536689909226 EQLMFPFHFVDR Oxidation (M) 1580.7446 0.74458394 3765 Q86WV4;P82933 MRPS9 28S ribosomal protein S9, mitochondrial yes no 0 1 0 8 0 1 59.347 59.389 3 0.04905 17572 20230619_1888_Aki_TMTPro18x_K_F8 42.242 28.814 30565 20174 26873 34129 77346 37315 38710 30126 35900 26322 35762 33407 33956 29737 33491 36448 32111 37286 28200 18595 28340 33323 74925 37442 41150 31213 36746 27048 36612 33504 34692 31142 34007 36558 30773 35387 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9278900 7311 3765 6916 13899 11167 11167 2450 1 9606 Homo sapiens -0.02255856671354195 EQLMREEAEQK Unmodified 1389.6558 0.65582851 3890 Q14444-2;Q14444;G3V153;B3KXU8;E9PLA9 CAPRIN1 Caprin-1 yes no 0 0 1 2.5 0.5 1 1 41.384 41.452 3 4.9787E-09 10470 20230619_1881_Aki_TMTPro18x_K_F2 180.24 153.09 286920 258320 271350 230900 313330 300400 286770 291650 354830 323320 336820 281600 331350 250100 274230 379870 355730 280810 265350 236270 277250 236690 321210 298630 292850 299250 356910 323870 345720 287070 335520 265910 284930 373790 339050 268040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 149940000 7312 3890 6917 13900;13901 11168;11169 11168 2 9606 Homo sapiens -0.023413167016769876 EQLNRPR Unmodified 911.49371 0.49371263 1952 A4UCR9;C9JJ19;P82930 MRPS34 28S ribosomal protein S34, mitochondrial yes no 0 0 1 6 0 1 26.207 26.242 3 0.01861 4491 20230619_1886_Aki_TMTPro18x_K_F6 86.866 41.554 22233 16420 24664 21002 33668 31770 26177 28485 28895 23533 27353 28506 25520 24742 22639 18317 28946 32357 20565 15077 24956 20980 34010 31242 26923 29178 29215 24209 28063 28566 25993 25314 23395 19312 27658 30571 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6502600 7313 1952 6918 13902 11170 11170 1 9606 Homo sapiens 0.03442552189039816 EQLPIFK Unmodified 873.496 0.49600404 2871 Q6LES8;E5KSX8;E5KSU5;Q00059;H7BYN3;Q00059-2;Q05D31;Q3SX57 TFAM Transcription factor A, mitochondrial yes no 0 0 0 8 0 1 55.658 55.72 3 0.059497 16025 20230619_1888_Aki_TMTPro18x_K_F8 51.736 0 89164 78780 94661 91789 92640 100880 107290 102780 112010 116060 124030 125330 124030 105930 121320 133680 128880 133710 82531 72218 95661 91789 96734 101390 107490 105230 114340 116850 126710 126180 126460 111370 123900 133860 123270 126980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45916000 7314 2871 6919 13903 11171 11171 1 9606 Homo sapiens 0.05419587874143872 EQLQALNDR Unmodified 1085.5465 0.54653606 3438 P12036-2;P12036 NEFH Neurofilament heavy polypeptide yes no 0 0 0 3 0 1 40.829 40.888 2 4.9145E-05 9976 20230619_1882_Aki_TMTPro18x_K_F3 182.16 135.69 111030 84190 96614 62859 28870 32672 46050 44164 50194 141590 153320 148770 147380 122500 126530 175650 184360 152210 102510 76959 98072 65048 35869 35742 45782 46963 55302 137900 152120 149830 149610 130000 132480 174190 175610 144940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91000000 7315 3438 6920 13904 11172 11172 1 9606 Homo sapiens 0.0071846546118194965 EQLQDMGLEDLFSPEK Unmodified 1877.8717 0.87169453 2788 CON__P41361 yes yes 0 0 0 4 0 1 63.87 63.878 3 3.3387E-15 19963 20230619_1883_Aki_TMTPro18x_K_F4 190.82 180.19 + 5625.4 6056.8 6580.8 8484.6 9965.8 16082 7147.6 9419.6 17984 42384 78065 129400 45097 63960 93518 46793 65013 103510 5219.2 5559.5 6673.4 8455 10071 15523 7750.8 10997 20090 43620 76242 124910 49485 67109 92428 50628 62746 97576 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58666000 7316 2788 6921 13905 11173 11173 1 -0.03212645098324174 EQLQDMGLEDLFSPEK Oxidation (M) 1893.8666 0.86660915 2788 CON__P41361 yes yes 0 1 0 4 0 1 62.52 62.525 3 0.014512 19393 20230619_1883_Aki_TMTPro18x_K_F4 57.197 46.253 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7317 2788 6921 13906 11174 11174 1666 1 -0.04456948960955742 EQLQGLNDR Unmodified 1071.5309 0.530886 1958;3949 Q16352;E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 INA;NEFM Alpha-internexin;Neurofilament medium polypeptide no no 0 0 0 2.5 0.5 1 1 39.031 39.091 2 2.4343E-05 9368 20230619_1881_Aki_TMTPro18x_K_F2 167.93 98.109 339730 275280 300060 258280 154540 155590 127560 122220 191960 326150 464520 451620 330800 348150 371870 349990 509520 445330 313820 251970 305450 261220 171490 164760 132810 132960 202910 322290 457800 449130 344290 362370 384870 357120 485730 422200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 555280000 7318 3949;1958 6922 13907;13908 11175 11175 1 9606 Homo sapiens -0.002018210558617284 EQLRQEQALLEEIER Unmodified 1882.9749 0.97485447 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1 PLEC Plectin yes no 0 0 1 2 0 1 57.119 57.136 3 5.3523E-08 17461 20230619_1881_Aki_TMTPro18x_K_F2 139.64 83.085 23257 21373 22048 23174 23367 22911 22708 29416 30783 25767 23644 24913 28926 22068 25466 26257 24834 27325 21512 19577 22518 23270 24144 23351 23200 29481 30620 26209 24833 25232 29173 23095 25926 26377 23785 25933 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69850000 7319 3921 6923 13909 11176 11176 1 9606 Homo sapiens 0.06868603404541318 EQLTEEAR Unmodified 974.46689 0.46688876 4656 Q9UBS4;B3KW63;H7C2Y5 DNAJB11 DnaJ homolog subfamily B member 11 yes no 0 0 0 1 0 1 34.672 34.672 2 0.00030423 7832 20230619_1880_Aki_TMTPro18x_K_F1 167.04 122.27 45733 25560 53752 64422 74582 88694 64395 75981 87747 49963 78704 90948 77857 64242 76548 39011 93896 86909 42266 23737 54324 62077 75617 87442 66254 77785 87550 53193 81222 89480 79428 65867 78597 42417 89623 82065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102370000 7320 4656 6924 13910 11177 11177 1 9606 Homo sapiens -0.021366012128055445 EQLTPSQIMSLEK Oxidation (M) 1518.76 0.75995923 2871 Q6LES8;E5KSX8;E5KSU5;Q00059;H7BYN3;Q00059-2 TFAM Transcription factor A, mitochondrial yes no 0 1 0 5.5 0.5 1 1 52.983 53.057 3 4.1453E-06 15070 20230619_1885_Aki_TMTPro18x_K_F5 124.51 100.43 56518 45101 60837 56355 57846 60299 57674 58870 66947 62469 66224 63798 65135 58758 67904 66358 64610 67819 52285 41388 61357 56058 60288 60655 58482 60336 67646 62991 67930 64549 66660 61167 68812 66656 61872 64388 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138460000 7321 2871 6925 13911;13912 11178 11178 1705 1 9606 Homo sapiens 0.021329653352040623 EQLWLANEGLITR Unmodified 1541.8202 0.82019173 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;A0A0J9YXZ5;Q6P1N4;A0A087WWP1 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 6.5 0.5 2 2 61.225 61.271 2;3 0.00069131 18680 20230619_1886_Aki_TMTPro18x_K_F6 89.471 62.798 189130 200020 210140 216340 191910 253610 243200 233750 278470 259760 237780 264270 286320 229350 247330 294430 262780 286210 175370 183130 211570 217700 202450 253130 243310 240870 280120 261320 248190 266840 288750 241240 253300 294230 251440 271850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 229590000 7322 707 6926 13913;13914;13915;13916 11179;11180 11179 2 9606 Homo sapiens 0.0709544378062219 EQMALNHGEEQVR Oxidation (M) 1555.7049 0.70490397 432 A0A024R782;P07738;Q59GR5;B3KUR3 BPGM Bisphosphoglycerate mutase;Phosphoglycerate mutase yes no 0 1 0 2 0 1 31.236 31.299 3 0.0036583 6220 20230619_1881_Aki_TMTPro18x_K_F2 73.415 59.736 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7323 432 6927 13917 11181 11181 268 1 9606 Homo sapiens -0.05072028412701002 EQMEAEIAHLK Unmodified 1297.6336 0.63363651 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 0 3.5 0.5 1 1 51.609 51.655 3 0.0013443 14906 20230619_1882_Aki_TMTPro18x_K_F3 87.498 62.707 260620 208560 235030 255180 223350 279710 258880 260190 296580 293110 320280 348990 343620 292970 320500 345820 369380 390510 240760 191350 240870 254200 234240 280460 260200 268080 300950 296170 328730 349800 348900 306880 329150 349090 353100 370350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 408620000 7324 380 6928 13918;13919 11182;11183 11182 2 9606 Homo sapiens -0.00327496379418335 EQMFAAQEMFK Unmodified 1358.5999 0.59989354 991 B3KTK5;Q53GS8;H0Y3X6;B3KM78;A0A0C4DFX9;Q9H3P2;B3KSP0;Q9H3P2-7 NELFA;WHSC2 Negative elongation factor A yes no 0 0 0 6.5 0.5 1 1 60.153 60.205 3 0.00027933 18197 20230619_1886_Aki_TMTPro18x_K_F6 87.719 81.139 37941 32603 31793 37582 36664 43439 45018 41518 47923 43602 41602 44018 46087 39319 41902 47796 48160 52777 35047 29888 32928 37622 37955 43434 44973 42610 48404 43977 43199 44506 46706 41173 43062 48154 46051 50058 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46211000 7325 991 6929 13920;13921 11184;11185 11184 2 9606 Homo sapiens -0.06506241142824365 EQMLTSPTQ Oxidation (M) 1049.4699 0.46992522 1938 A4D1U5;Q53H12;E9PC15;B4E2Z8;A0A3B3ITD0;A0A0G2JLG5;A0A3B3ISY9 FLJ10842;AGK Acylglycerol kinase, mitochondrial yes no 0 1 0 2 0 1 40.049 40.119 2 0.080456 9877 20230619_1881_Aki_TMTPro18x_K_F2 58.083 44.575 55494 35558 47014 51193 75286 74161 60969 72928 81163 53649 65821 64677 68589 48791 62326 55730 73365 67985 51179 32713 48902 50698 75566 73212 62929 74014 80851 55622 68361 64641 69568 51278 64054 56600 70051 64462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47767000 7326 1938 6930 13922 11186 11186 1238 1 9606 Homo sapiens -0.05283094150331635 EQMQPTHPIR Oxidation (M) 1251.603 0.60300508 145 A0A024R1K7;Q04917;B2R6N6;Q9H4N8;A2IDB2 YWHAH 14-3-3 protein eta yes no 0 1 0 4.86 1.25 1 2 2 1 1 25.3 25.383 3 5.7409E-06 3893 20230619_1885_Aki_TMTPro18x_K_F5 157.14 129.27 236050 182620 215620 253980 275540 269470 308220 293360 321870 289890 342270 338100 316110 275840 289810 343900 358080 325500 218040 167800 221880 250770 282050 271880 309200 298010 327760 294610 349030 339060 322310 290080 299220 343330 341730 309470 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 906860000 7327 145 6931 13923;13924;13925;13926;13927;13928;13929 11187;11188;11189;11190;11191 11189 61 5 9606 Homo sapiens -0.012732299737990616 EQMQPTHPIR Unmodified 1235.6081 0.60809046 145 A0A024R1K7;Q04917;B2R6N6;Q9H4N8;A2IDB2 YWHAH 14-3-3 protein eta yes no 0 0 0 4.5 0.5 1 1 31.152 31.223 3 2.3253E-07 6089 20230619_1885_Aki_TMTPro18x_K_F5 182.28 144.73 68215 43328 85171 79111 101420 107770 93824 116790 95873 71236 99864 113290 95352 90146 97224 55802 117370 89644 63118 39987 85315 77305 103760 106930 95188 117390 97609 75700 102190 112240 97621 91909 99691 58687 111920 84888 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 266850000 7328 145 6931 13930;13931 11192;11193 11193 2 9606 Homo sapiens -0.0002892611116749322 EQNIVFNAETYSNLIK Unmodified 1881.9472 0.94724273 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJA1;A0A804HKK7;A0A804HKX6 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 7.5 0.5 1 1 62.493 62.523 3 0.01571 18832 20230619_1888_Aki_TMTPro18x_K_F8 58.159 37.206 109680 83766 111590 125820 105290 115650 114060 112800 118390 134890 133820 141950 136400 120200 138880 149160 138100 177260 101390 77042 113180 123420 110070 117630 114690 116070 121080 135310 136780 143020 139260 126270 141210 150950 132420 167920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1564499999.9999998 7329 1723 6932 13932;13933 11194 11194 1 9606 Homo sapiens 0.04154700144272283 EQNSALPTSSQDEELMEVVEK Unmodified 2362.0846 0.08460043 1230 Q9UQ35;A0A140VK53;O60382;Q9UQ35-2 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 1.5 0.5 1 1 61.55 61.556 3 5.3878E-08 19283 20230619_1881_Aki_TMTPro18x_K_F2 105.22 91.209 61801 54164 61646 74976 60166 76156 69489 74287 78075 75097 75909 73016 81863 68566 82277 78983 74462 80132 57170 49743 62707 73988 62943 76833 69811 76041 78973 75794 78245 74087 83359 71439 83210 79286 71360 76077 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177210000 7330 1230 6933 13934;13935 11195 11195 1 9606 Homo sapiens -0.041958486197472666 EQNSALPTSSQDEELMEVVEK Oxidation (M) 2378.0795 0.079515052 1230 Q9UQ35;A0A140VK53;O60382;Q9UQ35-2 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 1 0 2 0 2 56.876 56.892 3 0.00018019 17348 20230619_1881_Aki_TMTPro18x_K_F2 80.303 70.246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7331 1230 6933 13936;13937 11196;11197 11196 771 2 9606 Homo sapiens -0.05440152482378835 EQNSPIYISR Unmodified 1205.6041 0.60405094 3005 G3V1D4;Q53FX5;Q9NUP9;H0YI92;H0YIA8;Q9HAP6;O14910 LIN7C;LIN7A;LIN7B Protein lin-7 homolog C;Protein lin-7 homolog B;Protein lin-7 homolog A yes no 0 0 0 5.5 0.5 1 1 41.923 42.013 2 8.7444E-07 10333 20230619_1885_Aki_TMTPro18x_K_F5 181.53 134.33 106640 89845 103620 127730 129550 137780 120480 123900 135080 132380 142510 141190 160050 128410 127800 155160 282780 153170 98603 82548 106040 125930 132240 138220 122480 127770 137130 133610 146600 142550 161410 134320 139150 155310 268160 145980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 219610000 7332 3005 6934 13938;13939 11198;11199 11198 2 9606 Homo sapiens 0.009473076667291025 EQNYCESR Unmodified 1084.4244 0.42437201 4155 Q7L5D6;A0A024R847;Q7L5D6-2;C9JPA8;C9JY46 GET4;C7orf20 Golgi to ER traffic protein 4 homolog yes no 0 0 0 1 0 1 29.184 29.184 2 0.031042 5682 20230619_1880_Aki_TMTPro18x_K_F1 79.148 64.991 7745.3 3595 10760 11437 13004 9632.8 10516 11645 8454.3 7688.5 10525 14273 8820.4 13002 13604 5189.9 19662 15169 7165.6 3360 10710 10869 13210 9920.3 10695 11657 8810.2 8178.4 10665 14124 9329.3 13026 14032 5929.1 18723 14318 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3863200 7333 4155 6935 13940 11200 11200 1 9606 Homo sapiens -0.1144631961271898 EQNYSDDVLANMISEPR Unmodified 1979.8895 0.88946986 1165 A0A218KGR2;P05067;P05067-8;P05067-11;E9PG40;A0A140VJC8;P05067-4;A0A0A0MRG2;P05067-9;P05067-7;P05067-6;P05067-10;B4DGD0;B4DJT9;B4DQM1;B4DM00;P05067-3;P05067-5;B4DMD5;B7Z313 APP Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes no 0 0 0 3 0 1 60.744 60.773 3 3.7754000000000005E-24 18716 20230619_1882_Aki_TMTPro18x_K_F3 214.34 204.14 39769 30771 36231 39163 39165 37361 41470 38678 45889 47300 44229 41726 53205 42480 43201 53044 47891 44364 36734 28246 37154 38839 40473 37966 41814 39664 46467 47175 45829 42657 53524 44359 44417 52624 45752 42242 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34065000 7334 1165 6936 13941 11201 11201 1 9606 Homo sapiens -0.06127929843455604 EQPCCAGLR Unmodified 1089.4695 0.46954807 857 H0YFZ5;H0YFM2;H0YFS8;F5GWT2;J3QK82;A0A087WYJ3;F5H4V9;Q16342-5;Q16342-2;Q16342-4;Q16342-3;Q16342 PDCD2 Programmed cell death protein 2 yes no 0 0 0 4 0 1 34.06 34.113 2 0.0079752 7185 20230619_1883_Aki_TMTPro18x_K_F4 88.819 51.798 13939 10508 14458 14731 14289 18215 14071 14479 21153 15002 12919 13145 16115 12897 13989 12962 20383 16134 12887 9657 14644 14569 14881 18058 14418 15062 20811 15097 13782 13414 16251 13328 14606 13206 19411 15306 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8722700 7335 857 6937 13942 11202 11202 1 9606 Homo sapiens -0.07160792351146483 EQPEKEPELQQYVPQLQNNTILR Unmodified 2793.4297 0.42972197 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 6 0 1 58.55 58.615 4 0.0055042 17598 20230619_1886_Aki_TMTPro18x_K_F6 67.88 51.61 36140 26775 32343 35922 28818 30841 33650 30298 37683 41916 40450 37990 45082 35536 39717 45390 37744 35503 33369 24597 33136 35453 30346 31564 33779 31322 38301 41617 41557 38671 45582 37259 40404 44891 36116 33834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79237000 7336 3152 6938 13943 11203 11203 1 9606 Homo sapiens 0.10474430239173671 EQPGSPEWIQLDK Unmodified 1525.7413 0.7412727 2670 B7SBB1;D2CVN5 AIP yes no 0 0 0 4 0.816 1 1 1 56.766 56.8 3 0.0001992 16563 20230619_1885_Aki_TMTPro18x_K_F5 95.981 78.316 57594 61299 97131 73137 109990 88486 98229 96488 103150 88436 86017 85530 81856 71302 108630 73727 91421 85658 53659 56173 95390 73167 112530 88590 99902 97779 104120 89722 88948 86445 84948 74168 108850 74839 87597 81253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 470150000 7337 2670 6939 13944;13945;13946 11204 11204 1 9606 Homo sapiens -0.0005682824435098155 EQPLDEELK Unmodified 1099.5397 0.53971935 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 1.5 0.5 1 1 48.049 48.084 2 3.5073E-05 13568 20230619_1880_Aki_TMTPro18x_K_F1 166.19 114.19 250110 189990 218440 284720 355760 419310 402110 382040 523480 402250 443890 447540 447640 383970 391620 499800 489740 462380 230920 174730 227160 281260 360340 412690 406080 393300 522800 407130 459290 450310 454260 404180 405220 497980 467440 439670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 415240000 7338 3387 6940 13947;13948 11205;11206 11205 2 9606 Homo sapiens -0.006068922100439522 EQPPTEPGPQSASEVEK Unmodified 1808.8428 0.84283724 2354 B3KMQ6;Q9NZT2-2;Q9NZT2;Q05BV5;V9H0E3;Q6PK21;A0A0A0MRN5 OGFR Opioid growth factor receptor yes no 0 0 0 3 0 1 43.227 43.292 3 0.01741 11039 20230619_1882_Aki_TMTPro18x_K_F3 57.936 46.565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7339 2354 6941 13949 11207 11207 1 9606 Homo sapiens -0.029230464030661096 EQPVFAMTGLR Unmodified 1247.6332 0.63324258 1938 A4D1U5;Q53H12;E9PG39;B4DR72;A0A3B3ISZ0;E9PC15;B4E2Z8;A0A3B3ITD0;A0A0G2JLG5;A0A3B3ISY9;A0A0G2JLD0;A0A3B3ITV0 FLJ10842;AGK Acylglycerol kinase, mitochondrial yes no 0 0 0 8 0 1 55.271 55.333 2 0.019489 15858 20230619_1888_Aki_TMTPro18x_K_F8 87.667 60.537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7340 1938 6942 13950 11208 11208 1 9606 Homo sapiens 0.019331286913711665 EQPWVSVQPR Unmodified 1224.6251 0.62512073 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 6.5 0.5 1 1 47.169 47.253 2 1.5129E-06 12685 20230619_1886_Aki_TMTPro18x_K_F6 195.36 141.58 188050 145950 163270 177380 156700 212760 197380 206540 233390 216890 225260 225550 235340 198060 222190 244150 245400 253630 173640 133910 167970 177020 164790 212200 197790 211650 235350 218930 231960 227700 239260 207680 227570 245070 234630 240770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252720000 7341 3881 6943 13951;13952 11209;11210 11209 2 9606 Homo sapiens 0.021793177662630114 EQQAQQEDPIER Unmodified 1469.6746 0.6746497 4729 Q9Y3P9;B7Z2B4 RABGAP1 Rab GTPase-activating protein 1 yes no 0 0 0 1 0 1 35.468 35.468 2 2.2762E-17 8164 20230619_1880_Aki_TMTPro18x_K_F1 224.66 203.96 15928 11561 17493 15925 16131 18332 18252 17962 23742 19177 23223 25545 20276 17803 17902 21456 32252 25737 14730 10624 17611 15757 16928 18341 18453 18410 23831 19514 23732 25373 20697 18812 19054 21731 30675 24424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16906000 7342 4729 6944 13953 11211 11211 1 9606 Homo sapiens -0.04140063806221406 EQQDLEFAK Unmodified 1106.5244 0.52440364 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DPM7;O95325 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 3 1.41 1 1 1 1 1 48.222 48.276 3 0.0045342 13623 20230619_1881_Aki_TMTPro18x_K_F2 60.899 47.546 402910 296270 328260 351810 399170 442210 400210 395390 494440 581730 652060 693820 721740 520640 529780 653560 729200 680340 371760 271840 340880 351920 409380 439300 406450 412100 505050 581140 664650 693170 724720 550170 553740 655770 695430 646090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 696920000 7343 2361 6945 13954;13955;13956;13957;13958 11212 11212 1 9606 Homo sapiens -0.024597590072289677 EQQEAIEHIDEVQNEIDR Unmodified 2194.0138 0.013818748 1789 A0A8J8YYJ1;Q01105-3;A0A8I5KS71;B2RCX0;A0A024R895;Q5VXV3;A0A0C4DFV9;Q01105-4;Q01105-2;Q01105;P0DME0 SET;SETSIP Protein SET;Protein SETSIP yes no 0 0 0 1.5 0.5 1 1 51.923 51.942 3 1.0163999999999999E-59 15115 20230619_1880_Aki_TMTPro18x_K_F1 299.91 263.52 190640 128560 168830 209770 153260 244430 212810 196900 266760 242920 246860 282870 293450 258400 223810 281530 281110 323020 175920 118430 173450 205400 162740 243130 212710 205750 267860 244390 256430 284400 294830 268580 232300 284690 268700 306210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1812099999.9999998 7344 1789 6946 13959;13960 11213;11214;11215 11213 3 9606 Homo sapiens -0.0354276082243814 EQQEPSSGGSVVPTVQEPK Unmodified 1981.9593 0.95926398 4371 Q96JJ7 TMX3 Protein disulfide-isomerase TMX3 yes yes 0 0 0 3.5 0.5 1 1 46.048 46.109 3 2.533E-10 12402 20230619_1882_Aki_TMTPro18x_K_F3 103.17 90.052 25438 21874 23557 23498 23392 23242 24132 26645 26886 29739 32617 27241 29547 29986 29692 30314 33184 34458 23515 20039 24078 23612 24317 23617 24394 27058 27471 29809 33027 27881 30293 30849 30387 30690 31725 32680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58252000 7345 4371 6947 13961;13962 11216 11216 1 9606 Homo sapiens 0.007562720968053327 EQQHVMEELFQSSFR Unmodified 1893.8679 0.86794655 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5 1.41 1 1 1 1 1 59.824 59.862 3 3.5066E-42 17829 20230619_1885_Aki_TMTPro18x_K_F5 276.75 255.94 183220 156670 195280 201480 171400 207000 201640 212980 255930 178980 149790 142530 176150 134820 157950 197040 168170 186210 169560 143780 197070 199880 180920 208970 203240 216230 253270 181740 159790 146210 178050 142720 161720 196260 160930 176910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 662230000 7346 3758 6948 13963;13964;13965;13966;13967 11217;11218 11217 2 9606 Homo sapiens -0.043232700815224234 EQQIEEHR Unmodified 1067.4996 0.49958587 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;B3KSQ7 DBN1 Drebrin yes no 0 0 0 1 0 1 27.737 27.737 3 2.8039E-05 5094 20230619_1880_Aki_TMTPro18x_K_F1 160.74 116.93 22945 10394 31079 31763 49340 40968 32324 43009 33092 22248 39083 49685 28117 38850 42981 11928 41809 38694 21219 9706.3 31152 30403 49216 40757 33644 43219 33862 24428 39439 48755 29846 38957 43202 14033 39992 36479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101280000 7347 1396 6949 13968 11219 11219 1 9606 Homo sapiens -0.031463940899584486 EQQIVIQSSGGLSK Unmodified 1472.7835 0.78347187 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;H0Y8S0 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 6.5 0.5 1 1 49.348 49.429 3 4.6199E-07 13667 20230619_1886_Aki_TMTPro18x_K_F6 136.39 111.62 531150 392600 493170 523110 542830 669430 613470 571680 829550 716790 712430 868420 925150 769590 640160 1067100 1035900 1127300 490550 360630 505210 519320 562810 663320 620840 594750 828160 721700 746470 871440 924360 812940 680190 1069500 987970 1069800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1849999999.9999998 7348 1488 6950 13969;13970 11220;11221 11220 2 9606 Homo sapiens 0.06599147164047281 EQQIVIQSSGGLSKDDIENMVK Unmodified 2417.2108 0.210804 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;H0Y8S0 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 1 6.67 0.471 1 2 59.348 59.401 3;4 4.4032E-23 17897 20230619_1886_Aki_TMTPro18x_K_F6 182.17 165.68 182940 179840 198110 199080 166400 195560 218610 199290 184280 248770 233560 206450 222450 171380 244120 193200 186680 154240 169490 164720 199550 199530 176660 198160 216410 204710 191910 247300 236750 210250 228170 179160 244390 191840 178940 147030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1570099999.9999998 7349 1488 6951 13971;13972;13973 11222;11223 11222 2 9606 Homo sapiens 0.05888702676156754 EQQLAEIEAR Unmodified 1185.599 0.59896556 1037;1668 A0A0G2JN29;Q15155;A0A0G2JP90;A0A7I2V4D7;A0A7I2V4T6;A0A7I2V6B0;J3KN36;Q5JPE7-2;P69849;Q5JPE7;A0A7I2V3P4;A0A7I2V2Z5;Q5JPE7-3;Q1LZN2 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 2;Nodal modulator 3 no no 0 0 0 1.5 0.5 1 1 44.486 44.528 2 0.0013284 12097 20230619_1880_Aki_TMTPro18x_K_F1 108.9 67.601 104430 77814 91068 114110 114410 131930 126730 122950 168460 144690 136810 148740 149870 122100 130030 167160 172690 169890 96412 71554 94137 112410 117460 131800 128270 126810 167960 145240 142490 149890 151630 129250 135130 167290 164790 161350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145820000 7350 1037;1668 6952 13974;13975 11224 11224 1 9606 Homo sapiens 0.013590038041456864 EQQLPVNEETLFQK Unmodified 1701.8574 0.85736509 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67;Q7Z3K3-3;B4DSK8 POGZ Pogo transposable element with ZNF domain yes no 0 0 0 4 0.816 1 1 1 58.263 58.293 3 9.5939E-13 17600 20230619_1883_Aki_TMTPro18x_K_F4 192.65 161.69 142940 127550 137680 145300 140730 166750 148610 149790 164820 169060 170030 154640 175380 153230 170470 189630 204290 180520 132210 116900 140400 145580 146260 166610 149930 154700 167260 169410 174360 157700 178660 160020 175400 189410 194970 171640 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 233270000 7351 4164 6953 13976;13977;13978 11225;11226;11227 11225 3 9606 Homo sapiens 0.03451070535697909 EQQMVMR Unmodified 920.42081 0.42080696 1833;2535 P61619;A0A8V8TMZ5;B4DR61;B3KNF6;C9JXC6;A0A8V8TMZ3;P61619-3;A0A8V8TN19;B3KME8;F8W776;Q8TC24;B3KQ68;Q9H9S3-2;Q9H9S3-3;Q9H9S3;B3KNG2;Q9NVQ7;H7C1S8;B4DM08 SEC61A1;SEC61A2 Protein transport protein Sec61 subunit alpha isoform 1;Protein transport protein Sec61 subunit alpha isoform 2 no no 0 0 0 3.5 0.5 1 1 36.044 36.095 2 0.027717 7960 20230619_1883_Aki_TMTPro18x_K_F4 96.285 79.321 97840 79380 108690 109790 167220 167850 122870 160120 171850 120190 149520 173940 137440 136510 146210 114470 180810 166260 90548 72920 110360 109110 167800 165130 128050 162890 171270 125300 154110 172760 141260 140830 150240 118410 172560 157420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86685000 7352 1833;2535 6954 13979;13980 11228 11228 1 9606 Homo sapiens -0.04258660920231705 EQQVDGDLLLR Unmodified 1284.6674 0.66737948 3800 Q05B42;Q0D2N8;Q6SZW1-2;Q6SZW1;B4DXM0 SARM1 Sterile alpha and TIR motif-containing protein 1 yes no 0 0 0 2 0 1 50.726 50.777 2 1.2611E-08 14806 20230619_1881_Aki_TMTPro18x_K_F2 180.66 131.86 37566 30772 39730 37717 30917 35664 36250 37764 44970 46233 45675 47507 55926 40380 46130 51462 50490 54048 34753 28231 40032 37509 32973 36270 36537 38662 45370 46303 47283 47925 56238 42514 47351 51663 48290 51294 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42141000 7353 3800 6955 13981 11229 11229 1 9606 Homo sapiens 0.036432483840144414 EQSCELSTCR Unmodified 1268.5125 0.5125351 4119 Q6P2H3-4;Q6P2H3-2;Q6P2H3 CEP85 Centrosomal protein of 85 kDa yes no 0 0 0 2 0 1 33.01 33.068 2 0.010946 6918 20230619_1881_Aki_TMTPro18x_K_F2 85.958 77.095 10795 4581.2 13094 11977 11205 14024 13521 12669 16489 10253 15828 14494 17883 9804.5 12166 10713 17691 14351 9969.2 4265 13078 11502 11861 13975 13592 12977 16572 10630 16343 14369 17882 10344 12766 10959 16850 13604 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7953600 7354 4119 6956 13982 11230 11230 1 9606 Homo sapiens -0.11098067084367358 EQSEVGSMGALLF Oxidation (M) 1382.6388 0.63878147 1833;2535 P61619;A0A8V8TMZ5;B4DR61;B3KNF6;C9JXC6;P61619-3;A0A8V8TN19;B3KME8;B3KNG2;B4DM08 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 no no 0 1 0 2.5 0.5 1 1 62.745 62.765 2 0.011067 19571 20230619_1882_Aki_TMTPro18x_K_F3 71.03 58.414 35506 26728 30636 33174 32201 32335 37926 32392 36737 43625 36769 41342 46250 30998 42055 46729 37740 45253 32778 24531 31564 32964 33452 32777 37861 33406 37552 43397 38179 41702 46638 33189 42629 46605 36203 42969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146730000 7355 1833;2535 6957 13983;13984 11231 11231 1173 1 9606 Homo sapiens -0.03723237307440286 EQSEVGSMGALLF Unmodified 1366.6439 0.64386684 1833;2535 P61619;A0A8V8TMZ5;B4DR61;B3KNF6;C9JXC6;P61619-3;A0A8V8TN19;B3KME8;B3KNG2;B4DM08 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 no no 0 0 0 3.5 0.5 1 1 65.506 65.529 2 0.00031226 20745 20230619_1882_Aki_TMTPro18x_K_F3 100.48 81.805 26477 21934 24340 26946 22143 26990 27686 29332 37029 29992 29456 34758 35151 29531 28562 38716 36806 39564 24469 20122 24891 26805 23363 27337 27882 29821 36876 30431 30857 34889 35393 31120 29671 38773 35155 37559 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 124310000 7356 1833;2535 6957 13985;13986 11232;11233 11232 2 9606 Homo sapiens -0.024789334448087175 EQSICAAEEQPAEDGQGETNK Unmodified 2289.9655 0.96554793 1136 B3KQF0;A0A0S2Z5M1;Q9UGP8;B3KNE7;B3KWU4 SEC63 Translocation protein SEC63 homolog yes no 0 0 0 1 0 1 43.572 43.572 3 4.6214E-23 11664 20230619_1880_Aki_TMTPro18x_K_F1 187.63 171.5 51735 38356 40651 51506 49916 60183 50236 50300 52221 52855 52927 56024 61552 48666 48296 70711 63258 60491 47726 35235 42427 51015 51189 59949 50697 52144 53148 53380 54660 56511 61908 51606 50293 70062 60361 57574 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161140000 7357 1136 6958 13987 11234 11234 1 9606 Homo sapiens -0.12783622524648308 EQSIFGDHRDEEEETHMK Unmodified 2215.944 0.94402462 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;B3KSQ7 DBN1 Drebrin yes no 0 0 1 2 0.816 1 1 1 40.848 40.893 5 0.00031587 10193 20230619_1881_Aki_TMTPro18x_K_F2 83.792 55.888 142290 112930 134160 152070 135670 168750 156870 163940 142000 146840 152800 172140 172140 127250 171190 161900 183810 192740 131490 103720 137120 150530 141470 169180 156540 167350 146000 150010 157300 172040 174900 134700 174740 163880 175810 182710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 987470000 7358 1396 6959 13988;13989;13990 11235 11235 1 9606 Homo sapiens -0.11530962762662966 EQSILELGSLLAK Unmodified 1399.7922 0.79224564 3207 O00231;O00231-2;B4DTS5;J3QRY4 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 5.33 3.09 1 1 1 64.538 64.555 3 7.1376E-08 19759 20230619_1888_Aki_TMTPro18x_K_F8 152.18 125.5 119010 95683 107220 122770 105960 128880 113700 120770 135040 140600 139490 134970 147310 124030 138610 165550 138300 151140 109950 87828 109980 121820 110520 129650 114900 124460 136610 140860 143220 136970 149670 130490 141240 164810 132420 143660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1001299999.9999999 7359 3207 6960 13991;13992;13993 11236;11237 11237 2 9606 Homo sapiens 0.10834120800518576 EQSQLTATQTR Unmodified 1261.6262 0.62624295 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q53GM6 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 3.5 0.5 1 1 32.944 33.008 2 6.586299999999999E-23 6718 20230619_1883_Aki_TMTPro18x_K_F4 252.14 220.38 49515 29243 66061 73828 104470 121940 75160 92718 84650 52487 98198 121120 85927 84859 103530 39013 99056 101980 45833 27150 66360 71392 104700 118850 77835 95624 86089 57329 99773 118480 88977 86290 104350 43695 94839 96186 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68295000 7360 1863 6961 13994;13995 11238;11239 11239 2 9606 Homo sapiens 0.005894873445186022 EQSQPCADNAVLSSGLTAAR Unmodified 2073.9749 0.97493082 3067 P19784;H3BNI9;H3BSA1 CSNK2A2 Casein kinase II subunit alpha' yes no 0 0 0 4 0 1 48.385 48.425 3 2.6752E-11 13260 20230619_1883_Aki_TMTPro18x_K_F4 129.2 119.44 24311 20628 23725 28159 26517 25959 24593 28682 30277 25961 29151 27929 26960 22442 30622 31483 27925 37090 22480 18944 24211 27784 27255 26483 25100 29037 30466 26441 29867 28098 27753 23821 30935 31798 26808 35135 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207870000 7361 3067 6962 13996 11240 11240 1 9606 Homo sapiens -0.019097646577847627 EQTADGVAVIPVLQR Unmodified 1594.8679 0.8678702 1968 A6NFX8;Q9UKK9;A6NJU6;A6NCQ0;H0YEY4 NUDT5 ADP-sugar pyrophosphatase yes no 0 0 0 5 0.816 1 1 1 55.641 55.691 3 5.397999999999999E-19 16109 20230619_1885_Aki_TMTPro18x_K_F5 166.9 145.35 39977 40903 39679 35711 38232 57604 50543 43884 78768 42057 43735 49612 44260 40991 46877 61682 43798 56884 37021 37389 40315 36812 40330 56261 51061 45735 77113 42930 46587 49755 45321 43631 47543 61333 42026 54032 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 267020000 7362 1968 6963 13997;13998;13999 11241 11241 1 9606 Homo sapiens 0.09423097980788953 EQTAQAIANTAR Unmodified 1272.6422 0.64222736 1820 G3V1N5;B4E3L3;A0A8V8TLZ9;Q96RU2-2;Q96RU2;H0YFT9 USP28 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 28 yes no 0 0 0 6 0 1 40.998 41.092 2 1.1056E-11 9984 20230619_1886_Aki_TMTPro18x_K_F6 162.68 137.23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7363 1820 6964 14000 11242 11242 1 9606 Homo sapiens 0.016811935814075696 EQTDQTQAQELHR Unmodified 1582.7336 0.73356156 1157 A0A0U1RRF2;B5MC64;A0A0U1RR64;A0A0U1RRD2;F8WD83;A0A0U1RR76;A6NJ78-3;A6NJ78-2;A6NJ78-4;A6NJ78 METTL15 Probable methyltransferase-like protein 15 yes no 0 0 0 1 0 1 30.225 30.225 3 4.3481E-28 6072 20230619_1880_Aki_TMTPro18x_K_F1 252.14 228.91 7209.6 5990.7 6185.3 7973.3 11194 11537 8744.8 10170 11635 9930.6 11973 11776 15057 12943 11010 5638.4 13976 12089 6659.4 5500.3 6453.7 7930.6 11167 11364 9048.5 10471 11702 10113 12397 11898 15078 12937 11398 6166.1 13330 11420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26795000 7364 1157 6965 14001 11243 11243 1 9606 Homo sapiens -0.03449587511909158 EQTEQILR Unmodified 1015.5298 0.52982336 3488 Q3B7A7;Q59HH3;P22102;B4DJ93;A0A140TA71 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 2.5 0.5 1 1 39.086 39.146 2 0.00094009 9401 20230619_1881_Aki_TMTPro18x_K_F2 152.63 85.598 340410 281020 301900 322510 396750 414140 366010 364450 492650 439470 474490 469140 496560 418440 413100 525560 554860 474760 314490 257640 311400 323510 403910 410820 374660 377690 493930 441240 488480 473350 502270 438880 429950 523270 528960 451760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 386790000 7365 3488 6966 14002;14003 11244 11244 1 9606 Homo sapiens 0.022679645752305078 EQTFSGGTSQDTK Unmodified 1384.6107 0.61065246 1525;3803 Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4;A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 no no 0 0 0 3 0 2 39.609 39.663 2;3 1.7576E-15 9453 20230619_1882_Aki_TMTPro18x_K_F3 195.87 169.86 157370 89128 178920 165240 247210 289200 188050 235190 234900 183450 236590 275310 226820 220340 216260 158500 246810 232200 145400 82322 180900 162110 249950 281560 194640 242400 236570 191050 242490 273210 231490 225740 221430 164650 235750 219820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 200710000 7366 3803;1525 6967 14004;14005 11245;11246;11247 11246 3 9606 Homo sapiens -0.06626843963181273 EQTLISMPYHVCTLK Unmodified 1818.9008 0.90082659 1136 B3KQF0;A0A0S2Z5M1;Q9UGP8;B3KWU4;A0A0S2Z518 SEC63 Translocation protein SEC63 homolog yes no 0 0 0 1 0 1 55.861 55.861 3 0.0024044 16777 20230619_1880_Aki_TMTPro18x_K_F1 77.324 60.897 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7367 1136 6968 14006 11248 11248 1 9606 Homo sapiens 0.024132207169714093 EQVANSAFVER Unmodified 1248.6099 0.6098646 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 0 3 0.816 1 1 1 41.763 41.823 2 2.8439E-12 10345 20230619_1882_Aki_TMTPro18x_K_F3 211.64 174 1154800 911750 936250 1011000 1082300 1196200 1051700 1086300 1395600 1417700 1372300 1829500 833150 1550600 730320 2139600 688610 1347400 1065900 835770 971810 1015500 1113000 1193400 1072900 1126200 1401500 1427700 1388100 1828700 868290 1633900 750620 2092300 663820 1285800 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 11003000000 7368 751 6969 14007;14008;14009 11249;11250;11251;11252 11250 4 9606 Homo sapiens -0.004495938215768547 EQVEPTPEDEDDDIELR Unmodified 2027.8807 0.88073889 815 A0A087WZG9;A0A087WXK2;A0A087WUL4;A0A087WX23;Q86TG7-2;Q86TG7-3;Q86TG7-5;Q86TG7;Q86TG7-4 PEG10 Retrotransposon-derived protein PEG10 yes no 0 0 0 1 0 1 49.073 49.073 3 8.0501E-14 13981 20230619_1880_Aki_TMTPro18x_K_F1 162.59 133.78 31591 35146 33859 37713 25346 30503 28073 25152 29714 42628 45913 39757 43991 39098 37826 48050 45855 44601 29295 32172 34098 37788 27087 31290 28230 26563 30868 42047 46211 40492 44675 40818 39073 47921 43787 42404 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177490000 7369 815 6970 14010 11253 11253 1 9606 Homo sapiens -0.09208624998927917 EQVIAALR Unmodified 898.52362 0.52361577 3653 P54727;B4DEA3;Q53F10;B7Z4W4;B7ZA74;P54727-2;H0Y579 RAD23B UV excision repair protein RAD23 homolog B yes no 0 0 0 7 0.816 1 1 1 47.853 47.928 2 0.0016112 12982 20230619_1886_Aki_TMTPro18x_K_F6 139.88 40.881 1126500 888270 976710 1060100 1004200 1084500 1139900 1164300 1299800 1293400 1295300 1264700 1349300 1132800 1150000 1416100 1333800 1314600 1040200 814810 1005500 1057100 1044800 1096800 1146600 1187200 1315200 1299200 1331200 1281000 1366000 1187800 1184500 1412100 1274300 1249800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1549399999.9999998 7370 3653 6971 14011;14012;14013 11254;11255 11254 2 9606 Homo sapiens 0.07029491134369437 EQVNDLFSR Unmodified 1106.5356 0.53563702 2144 X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9;B4DM07;A0A0D9SF80;A0A087WW90;Q86UP8;A0A494C0I1;A0A494C1N8;Q6EKJ0;Q86UP8-3 GTF2I;GTF2IRD2B;GTF2IRD2 General transcription factor II-I;General transcription factor II-I repeat domain-containing protein 2A;General transcription factor II-I repeat domain-containing protein 2B yes no 0 0 0 4 0.816 1 1 1 48.901 48.965 2 9.6216E-06 13460 20230619_1883_Aki_TMTPro18x_K_F4 174.41 151.67 337500 281960 281490 313010 321870 373830 324880 335460 459190 388390 402470 380050 391030 345250 370530 392810 398620 424740 311690 258410 291420 314390 331760 372560 331510 346690 457750 389660 414900 385060 398600 359830 378830 395720 381300 402980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 660740000 7371 2144 6972 14014;14015;14016 11256 11256 1 9606 Homo sapiens -0.013369369130941777 EQVPGFTPR Unmodified 1029.5243 0.52434406 2973 V9GYY3;F5H2F4;P11586;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TL46;A0A8C8UXK2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 5 0 1 43.423 43.504 2 0.0018593 10975 20230619_1885_Aki_TMTPro18x_K_F5 123.75 80.625 288320 239390 265230 270420 282650 306760 281200 265880 327310 375030 380730 376020 386080 331420 373270 418730 425480 391590 266450 219440 271610 271080 292250 306620 285120 277400 333250 373170 388340 380190 393310 347910 382910 417750 406350 372350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 534170000 7372 2973 6973 14017 11257 11257 1 9606 Homo sapiens 0.010762857834379247 EQVPSLGSNVACGLAYTDYHK Unmodified 2308.0794 0.079395893 1903 A1L0T0;M0R026 ILVBL Acetolactate synthase-like protein yes no 0 0 0 7.5 0.5 2 2 55.595 55.657 3;4 1.2375E-16 16014 20230619_1887_Aki_TMTPro18x_K_F7 164.18 152.93 66940 61527 67627 71384 57874 72150 65067 66729 70335 84747 83613 87740 87099 81321 88376 95716 101220 102800 61951 56393 68521 71303 61142 72775 65403 69036 71959 84754 85363 88709 88904 84839 90592 96331 96729 97563 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 193240000 7373 1903 6974 14018;14019;14020;14021 11258;11259 11258 2 9606 Homo sapiens -0.02232062901066456 EQVVEDRPVGGR Unmodified 1339.6844 0.68442653 2360 B3KNK9;Q8NBJ4-2;Q8NBJ4 GOLPH2;GOLM1 Golgi membrane protein 1 yes no 0 0 1 2 0 1 33.18 33.238 3 1.1405E-06 6970 20230619_1881_Aki_TMTPro18x_K_F2 122.46 96.9 19159 13794 18588 19235 20294 27144 22874 23218 33106 23419 28771 30877 30569 25048 25523 35945 36364 40366 17698 12679 18968 19074 21071 26737 23223 23992 32934 23907 29807 30830 30912 26613 26700 36155 34716 38278 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26091000 7374 2360 6975 14022 11260 11260 1 9606 Homo sapiens 0.028171689897817487 EQVYDAMGEK Unmodified 1168.507 0.50703901 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;Q6PJY7;E9PPR5;E9PNB5 NASP Nuclear autoantigenic sperm protein yes no 0 0 0 3 0 1 47.849 47.928 2 0.026106 13204 20230619_1882_Aki_TMTPro18x_K_F3 72.434 46.315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7375 3605 6976 14023 11261 11261 1 9606 Homo sapiens -0.07047422604546227 EQVYDAMGEKEEAK Unmodified 1625.7243 0.72430201 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;Q6PJY7;E9PPR5;E9PNB5 NASP Nuclear autoantigenic sperm protein yes no 0 0 1 3 0 1 47.493 47.572 3 0.0016518 13035 20230619_1882_Aki_TMTPro18x_K_F3 77.222 61.084 71743 56906 74870 77415 102210 93074 83244 85254 78220 95632 102460 88132 90440 73497 96354 73209 90034 79553 66350 52270 76191 76684 103300 92789 84922 87890 81037 95818 103380 89303 92909 76320 97392 74019 86132 75531 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23822000 7376 3605 6977 14024 11262 11262 1 9606 Homo sapiens -0.06353116912441692 EQWANLEQLSAIR Unmodified 1556.7947 0.79470526 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 7 0 1 61.213 61.252 3 3.6809E-06 18371 20230619_1887_Aki_TMTPro18x_K_F7 131.35 123.04 81310 65616 90869 100450 75454 84771 94430 81227 112890 109540 121170 110040 109800 95070 93339 120090 110180 139210 75252 60350 91342 98326 80105 86803 94686 84070 114250 109220 123330 111220 111660 99918 96296 121250 105460 131910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 283000000 7377 2337;3778;3779 6978 14025 11263 11263 1 9606 Homo sapiens 0.038579692581834024 EQWDTIEELIR Unmodified 1430.7042 0.70415892 569 A0A024R9D7;Q16698-2;Q16698 DECR1 2,4-dienoyl-CoA reductase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 63.357 63.376 2 1.3455E-16 19832 20230619_1882_Aki_TMTPro18x_K_F3 224.58 138.91 169950 145690 159110 198330 164010 191200 198450 204950 235790 194980 209760 214160 231800 206710 196940 249560 223460 266110 157110 133780 162870 195800 171040 194130 199230 208190 236930 198250 217410 216410 234320 215720 202650 250850 213850 252420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203870000 7378 569 6979 14026;14027 11264 11264 1 9606 Homo sapiens 0.006035002098997211 EQWIQDAEECDR Unmodified 1577.6416 0.64163501 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 0 1 0 1 51.316 51.316 2 1.2935E-45 14889 20230619_1880_Aki_TMTPro18x_K_F1 270.74 245.52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7379 3337 6980 14028 11265 11265 1 9606 Homo sapiens -0.12408013920617122 EQWPQCPTIK Unmodified 1285.6125 0.61250714 226 P07858;E9PHZ5;A0A024R374;A8K2H4;B4DL49;A0A7P0NGZ6;A0A7I2YQK9;A0A7I2V668;E9PQM1;A0A7I2V440;E9PR21;E9PSG5;A0A7I2V4Z9;E9PLY3;A0A7I2V4S6;E9PKQ7;E9PNL5;E9PCB3;Q5HYG5;A0A7I2V2J1;A0A7I2V302 CTSB;DKFZp686N0152 Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes no 0 0 0 7.5 0.5 1 1 50.614 50.693 3 0.00012567 13779 20230619_1888_Aki_TMTPro18x_K_F8 125.3 107.16 470210 423030 470530 428290 539200 636890 691080 714330 844500 676230 664000 707780 748990 587570 695490 729130 782070 786810 435070 387290 478990 435330 559160 629940 692400 722860 843990 686580 693830 712980 759030 617880 713100 733560 747470 746690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2152300000 7380 226 6981 14029;14030 11266;11267 11267 2 9606 Homo sapiens -0.0188746168828402 EQYAQEHGLNFQR Unmodified 1618.7488 0.7488177 3920 Q6FGV9;Q15126 PMVK Phosphomevalonate kinase yes no 0 0 0 4.5 0.5 1 1 40.733 40.798 3 1.0914999999999999E-21 9885 20230619_1883_Aki_TMTPro18x_K_F4 234.69 209.83 199940 138320 203840 235390 217560 227760 221180 226320 248370 263100 288220 287750 257000 262740 257050 287080 311280 366000 184730 127480 207110 229470 224890 230760 223740 232340 253130 264650 292490 290160 263630 273070 264560 292400 297690 346590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 713410000 7381 3920 6982 14031;14032 11268 11268 1 9606 Homo sapiens -0.03580675924058596 EQYDTIHR Unmodified 1060.4938 0.49377221 2672 B7WP74;Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog yes no 0 0 0 2 0 1 31.46 31.522 3 7.820400000000001E-30 6308 20230619_1881_Aki_TMTPro18x_K_F2 219.19 188.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7382 2672 6983 14033 11269 11269 1 9606 Homo sapiens -0.034054926016324316 EQYEALQEETR Unmodified 1394.6314 0.6313879 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;E9PNZ4 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 0 1 0 1 42.331 42.331 2 0.00017778 11123 20230619_1880_Aki_TMTPro18x_K_F1 131.17 105.23 39012 27120 35307 32044 46731 46805 39697 38251 47598 55679 55436 58478 58753 45798 47756 60784 58911 60815 36011 24888 36317 32157 47431 46032 40684 40120 48416 55412 56660 58791 59312 48471 49444 60803 56271 57755 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74000000 7383 1566 6984 14034 11270 11270 1 9606 Homo sapiens -0.05014253583544814 EQYLYTK Unmodified 943.4651 0.46509784 1777 D3DUJ0;A0A8I5KVV1;Q8TA92;Q9Y4W6;A0A8I5QJR7 AFG3L2 AFG3-like protein 2 yes no 0 0 0 7 0 1 46.726 46.814 2 0.019542 12122 20230619_1887_Aki_TMTPro18x_K_F7 105.78 51.376 35855 29080 33874 33758 45890 43814 42065 45972 55269 43719 51520 49619 49283 41966 40571 54526 58128 59298 33137 26665 34748 33855 46584 43610 43043 46730 55369 44501 52909 49880 49977 44211 42455 54812 55455 56266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20664000 7384 1777 6985 14035 11271 11271 1 9606 Homo sapiens -0.008896102307630827 EQYPGIEIESR Unmodified 1319.6357 0.635745 3139 J3KTI2;Q9BRT3 MIEN1 Migration and invasion enhancer 1 yes no 0 0 0 2 0.816 1 1 1 47.157 47.209 2 5.467E-06 13190 20230619_1881_Aki_TMTPro18x_K_F2 157.68 116.95 37260 33237 36399 40349 31955 39390 41616 36539 40882 48790 50974 45908 45236 44438 38997 48062 48581 51908 34466 30480 37013 40150 33824 39836 41382 37875 42113 48558 51533 46693 46097 46065 40346 48431 46412 49249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158110000 7385 3139 6986 14036;14037;14038 11272 11272 1 9606 Homo sapiens -0.011287443699529831 EQYSDAPEEIR Unmodified 1335.5943 0.59427411 1859 H0YJQ1;A0A8V8TRJ3;Q8NEJ9-2;Q8NEJ9;H0YJ17;A0A8V8TQS3 NGDN Neuroguidin yes no 0 0 0 1 0 1 40.523 40.523 2 4.192E-12 10327 20230619_1880_Aki_TMTPro18x_K_F1 208.33 188 42806 29338 36156 46223 40046 48623 45585 38159 61681 51288 56193 58152 64510 53277 48204 68471 59352 64420 39490 27011 37409 45277 41516 48718 46107 40097 61676 51386 58266 58578 64801 55917 50033 68275 56715 61211 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85581000 7386 1859 6987 14039 11273 11273 1 9606 Homo sapiens -0.06009925129296789 ERAPEQLR Unmodified 997.53049 0.53049207 2125 H0Y6F5;A8K8Q0;Q9H4I2;Q9H4I2-2 ZHX3 Zinc fingers and homeoboxes protein 3 yes no 0 0 1 3 0 1 28.108 28.219 3 0.01413 4956 20230619_1882_Aki_TMTPro18x_K_F3 68.735 18.922 12870 11012 13814 14553 15601 16377 16735 16937 21693 21213 27796 22725 23832 23600 17598 17670 26463 25149 11911 10109 13986 14430 16091 16436 16965 17376 22046 21263 28009 23035 24178 23999 18492 18275 25225 23812 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5986800 7387 2125 6988 14040 11274 11274 1 9606 Homo sapiens 0.03162804014937137 ERCPACFVGTITGDRR Unmodified 1893.8938 0.89378415 2124 A8K9T9;A8K8N7;O15067;B4DJ26 PFAS Phosphoribosylformylglycinamidine synthase yes no 0 0 2 2 0 1 41.108 41.184 4 0.00020158 10376 20230619_1881_Aki_TMTPro18x_K_F2 93.152 75.452 45641 40866 38567 47042 43848 48446 49485 44350 59322 56282 53807 63941 67663 52363 51146 53739 71165 62113 42174 37456 39900 47014 45307 48802 49848 45937 59678 56485 56126 64105 67819 54502 53409 54450 67834 58940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76521000 7388 2124 6989 14041 11275 11275 1 9606 Homo sapiens -0.01740699110882815 ERDAQAIFER Unmodified 1233.6102 0.61019895 1919 A2VCQ9;O15541 SAMD13;RNF113A RING finger protein 113A yes no 0 0 1 3.5 0.5 1 1 39.931 39.98 3 0.051222 9608 20230619_1882_Aki_TMTPro18x_K_F3 50.786 27.357 62078 51695 46111 71052 67626 71878 86002 70162 85575 61206 64994 72991 74466 57456 62169 69645 81280 72044 57286 47480 48667 70118 69023 72570 85529 71628 86305 62735 68126 73027 75106 60445 64523 69906 77519 68436 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53189000 7389 1919 6990 14042;14043 11276 11276 1 9606 Homo sapiens 0.002738258982617481 ERDDILR Unmodified 915.47739 0.47739386 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9 VCL;HEL114 Vinculin yes no 0 0 1 2 0 1 32.816 32.874 3 0.0094276 6832 20230619_1881_Aki_TMTPro18x_K_F2 94.114 30.629 113590 84202 102440 119020 186060 204590 195270 201630 299770 152310 152400 196150 208820 152770 127890 220800 201600 207900 104890 77397 106410 118400 187090 200230 199300 204740 293190 158190 165940 195690 207480 162660 136050 219770 192230 197580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186060000 7390 51 6991 14044 11277 11277 1 9606 Homo sapiens 0.016274262322781397 ERDENLLK Unmodified 1015.5298 0.52982336 4413 Q9BQP7;Q5QPE8 MGME1 Mitochondrial genome maintenance exonuclease 1 yes no 0 0 1 3 0 1 38.974 39.028 3 0.0035938 9184 20230619_1882_Aki_TMTPro18x_K_F3 101.9 56.735 133060 96663 112370 127890 154830 154020 151270 148090 212480 151450 176400 158230 165180 142650 144070 171500 199390 171180 122790 88792 116600 126900 157390 153650 154530 151770 211340 153240 182020 159920 168030 149180 150060 171780 190040 162690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78490000 7391 4413 6992 14045 11278 11278 1 9606 Homo sapiens 0.022679645752305078 ERDFYFGK Unmodified 1060.4978 0.49779495 2536;702 A0A024RC33;Q15555-4;Q15555-5;Q15555-3;Q15555;Q15691;B4DM33 MAPRE2;MAPRE1 Microtubule-associated protein RP/EB family member 2;Microtubule-associated protein RP/EB family member 1 no no 0 0 1 7 0.816 1 1 1 46.946 47.019 3 0.0020572 12170 20230619_1887_Aki_TMTPro18x_K_F7 141.2 90.589 1240400 1062200 1088800 1162400 876710 925180 1151500 1070100 1373300 1529300 1480300 1229600 1585700 1230400 1236000 1720800 1571700 1402500 1146100 973270 1115800 1163200 935080 957650 1152200 1095900 1391600 1511700 1516200 1263200 1597900 1295500 1284200 1702100 1499400 1336100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1061199999.9999999 7392 702;2536 6993 14046;14047;14048 11279 11279 1 9606 Homo sapiens -0.030034031079139822 ERDQGGFGDR Unmodified 1135.5006 0.5006485 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 0 1 1 0 1 27.907 27.907 3 7.579E-06 5201 20230619_1880_Aki_TMTPro18x_K_F1 172.27 143.88 21810 11737 20899 22195 22601 28302 28356 24274 38383 28043 35811 30223 30037 27512 25856 19447 33217 36474 20117 10847 21349 21614 23539 28036 28545 25186 38373 28238 36560 30484 30658 28064 26736 20647 31733 34451 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40894000 7393 3197 6994 14049 11280 11280 1 9606 Homo sapiens -0.06168179721043998 ERDQGGFGDRNEYGSR Unmodified 1841.8041 0.80410074 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 0 2 2.5 0.5 1 1 29.907 29.988 4 7.8923E-34 5729 20230619_1881_Aki_TMTPro18x_K_F2 258.8 238.96 103080 77523 84507 95225 111270 101400 109310 120830 126760 124130 136460 128240 132090 113110 114750 150880 152730 137580 95123 71146 87834 94818 113300 102570 110880 122130 128540 125370 139280 129590 134170 119150 119280 150160 145660 130870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 273060000 7394 3197 6995 14050;14051 11281;11282 11281 2 9606 Homo sapiens -0.08312914194198129 ERDSELSDTDSGCCLGQSESDK Unmodified 2473.9809 0.98093999 809 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 0 0 1 1 0 2 40.928 40.928 3;4 3.3291E-23 10507 20230619_1880_Aki_TMTPro18x_K_F1 177.87 174.77 45190 38122 44228 39368 29837 40966 37158 39726 46994 54076 50808 37172 57121 39744 35596 61790 49706 38254 41787 34915 44765 39713 32411 41279 37386 41035 47511 53365 52098 38663 57022 42098 37496 60345 47343 36625 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102030000 7395 809 6996 14052;14053 11283;11284 11283 2 9606 Homo sapiens -0.19709123789789373 ERDVILR Unmodified 899.51886 0.51886475 3533 P31930;B4DUL5;B4DZB9 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 1 4 0.816 1 1 1 33.762 33.83 3 0.0028118 7027 20230619_1883_Aki_TMTPro18x_K_F4 125.96 53.139 403520 330740 388390 459880 567310 575060 535440 560670 738120 447920 515840 525860 546220 446450 444690 543030 523600 476300 373010 303830 398920 455120 574210 572370 547670 570640 730700 461660 540950 527870 551730 468140 458860 540190 499890 453270 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 425970000 7396 3533 6997 14054;14055;14056 11285;11286;11287 11286 3 9606 Homo sapiens 0.06508606991621946 ERDVIMR Unmodified 917.47529 0.47528537 2105;3883 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;B4DNH2;J3KSZ0;B4DKP9;J3QL52;Q14240;Q14240-2;E7EQG2;Q9NZE6;B4DJX6;Q96B07 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 1 4 0.816 1 1 1 32.04 32.113 3 0.0029039 6400 20230619_1882_Aki_TMTPro18x_K_F3 124.08 85.841 609010 374280 500480 576350 633270 716720 573440 653410 921200 750400 838140 947560 1007200 844130 597860 1044700 1146400 960330 561430 344680 519850 566910 646810 712310 592440 674240 915140 759690 871250 949610 1003700 884480 647780 1040600 1090300 913700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 725360000 7397 2105;3883 6998 14057;14058;14059 11288;11289 11288 2 9606 Homo sapiens 0.013246742228375297 EREAELGAK Unmodified 1001.5142 0.5141733 1667 Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;H0Y5F5;H0YCC8 PABPC4 Polyadenylate-binding protein 4;Polyadenylate-binding protein yes no 0 0 1 2.5 0.5 1 1 34.598 34.657 3 0.00065919 7528 20230619_1881_Aki_TMTPro18x_K_F2 113.15 46.879 124470 58334 140330 163780 199170 227130 185660 229660 238500 135400 224160 258280 185960 184920 176650 91102 250080 240070 114910 54356 142290 157330 201950 224620 189660 231800 238900 145720 229190 253880 190810 188220 183340 101700 238500 226480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 202790000 7398 1667 6999 14060;14061 11290;11291 11290 2 9606 Homo sapiens 0.013476780581981984 EREAELGAR Unmodified 1029.5203 0.52032131 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;A0A024R9E2;Q3ZCS4;Q9H361;Q5VX58;Q2VIP3;H0YBN4;Q4VXU2;A0A6Q8JFT6;Q4VXU2-2 PABPC1;PABPC3;PABPC1L Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like yes no 0 0 1 1.5 0.5 1 1 28.201 28.238 3 3.9485E-06 5339 20230619_1880_Aki_TMTPro18x_K_F1 172.98 72.735 190140 92359 168140 186750 225040 237970 173850 221530 325340 233650 267330 253170 282480 238090 155190 173610 320570 252930 175200 85498 173550 181310 228180 236210 183000 227590 320300 236320 277290 255470 281930 242830 169220 179930 304650 239640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 905950000 7399 566 7000 14062;14063 11292;11293 11292 2 9606 Homo sapiens 0.0067419628969673795 EREALEAAR Unmodified 1043.536 0.53597137 2175 Q4LE74;M0R300;M0R0P8;B0I1T6;Q13459-2;Q13459 MYO9B variant protein;MYO9B Unconventional myosin-IXb yes no 0 0 1 2 0 1 30.657 30.722 3 0.00030204 5980 20230619_1881_Aki_TMTPro18x_K_F2 121.6 79.899 26449 16457 24430 26786 31692 33960 26729 31439 45099 28248 35818 35199 37929 31936 31154 28968 41467 35487 24405 15165 25104 26278 32246 33722 27807 32192 44475 28971 37259 35309 38332 32901 32350 29535 39534 33658 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18481000 7400 2175 7001 14064 11294 11294 1 9606 Homo sapiens 0.01594482806740416 EREALETER Unmodified 1131.552 0.55201537 3046 H0YHS6;Q9Y2Z4 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial yes no 0 0 1 1 0 1 29.209 29.209 3 1.2494E-06 5661 20230619_1880_Aki_TMTPro18x_K_F1 187.42 125.42 48053 25689 47264 54855 79633 79859 56383 65745 95178 62206 77523 79320 76273 67382 64968 49332 94010 76782 44331 23789 48594 53250 79550 78492 59387 68007 93963 63662 80295 79289 77399 68968 67764 51465 89548 72700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78003000 7401 3046 7002 14065 11295 11295 1 9606 Homo sapiens -0.008498557469920343 ERECNPPNSQPASYQR Unmodified 1931.8544 0.85442176 1663 A0A7I2V4F2;A0A7I2V629;Q2NKQ6;E9PG73;A0A7I2V5Q5;Q13427;Q32LZ0;C9JM79;Q13427-2 PPIG Peptidyl-prolyl cis-trans isomerase G yes no 0 0 1 3.5 0.5 1 1 29.652 29.734 3 1.2324E-12 5430 20230619_1883_Aki_TMTPro18x_K_F4 169.64 151.94 10397 7629.5 9852.1 10683 12073 11416 13115 9788.7 13754 10633 11983 11027 14786 11351 10516 14643 16039 10987 9603.8 7012.4 10091 10543 12376 11454 13171 10148 13898 10725 12491 11201 14797 11872 11093 14447 15257 10493 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28765000 7402 1663 7003 14066;14067 11296;11297 11297 2 9606 Homo sapiens -0.0742312786076127 ERECPTVAPAHSLTK Unmodified 1694.841 0.84100352 2848 Q9UPQ0-10;Q9UPQ0;D6RD46;Q9UPQ0-2;Q9UPQ0-4;G5EA03;E9PDJ9;B7Z2J4;E7EPK0;Q9UPQ0-3;Q9UPQ0-8;Q9UPQ0-5;Q9UPQ0-6;H0Y8P3;Q9UPQ0-9;B7Z5Q8;B7Z3F1;B7Z3G0;B7Z5G6;B7Z656 LIMCH1 LIM and calponin homology domains-containing protein 1 yes no 0 0 1 6.5 0.5 1 1 35.853 35.919 4 3.0396E-10 7937 20230619_1886_Aki_TMTPro18x_K_F6 154.47 114.96 111180 77353 84075 86713 96292 108320 91344 94435 99280 87797 108820 136130 108840 100230 117500 124930 136900 148890 102500 70951 87850 87107 99016 107590 92671 97271 101030 90557 111430 134750 111570 105830 120440 126460 130880 141120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 352740000 7403 2848 7004 14068;14069 11298 11298 1 9606 Homo sapiens 0.021376660979512963 EREDEELNNPMK Oxidation (M) 1518.662 0.6620361 4454 Q9BW85;M0R2S3 CCDC94 Coiled-coil domain-containing protein 94 yes no 0 1 1 2 0 1 36.018 36.075 3 0.0015908 8128 20230619_1881_Aki_TMTPro18x_K_F2 89.189 76.208 12784 9243.4 10873 12498 17726 15773 13211 16482 18080 14211 15773 17807 16275 11202 16782 12798 14228 13431 11798 8493 11311 12394 17733 15724 13737 16716 18047 14591 16329 17678 16596 11866 16892 12886 13632 12753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11932000 7404 4454 7005 14070 11299 11299 2775 1 9606 Homo sapiens -0.07654843260775124 EREEEFK Unmodified 965.44543 0.44542503 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;Q9NYF8-4;H0YF14;H0YF63;B7Z8J9 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 1 1.5 0.5 1 1 35.066 35.095 3 0.0047102 7698 20230619_1881_Aki_TMTPro18x_K_F2 109.48 70.687 415730 215320 434470 506850 697710 680000 557650 630910 846440 478770 678460 623330 566500 532580 538110 266290 726760 621520 383680 199780 444080 489470 699900 672920 579160 643590 837790 497170 698550 622820 580930 538560 556480 292750 692810 586940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 474610000 7405 4629 7006 14071;14072 11300;11301 11301 2 9606 Homo sapiens -0.03867986241516519 EREEIAR Unmodified 901.46174 0.4617438 4550 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 yes yes 0 0 1 1 0 1 23.284 23.284 3 0.0018224 3850 20230619_1880_Aki_TMTPro18x_K_F1 117.02 40.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7406 4550 7007 14073 11302 11302 1 9606 Homo sapiens 0.007071397152230929 EREEIEK Unmodified 931.46108 0.4610751 3851 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 1 1.67 0.471 1 2 33.505 33.543 3 0.0071602 7347 20230619_1880_Aki_TMTPro18x_K_F1 106.93 19.675 202820 268550 214810 292360 383930 339810 254700 359170 247900 138280 305580 369390 175860 229100 300660 95809 331140 289100 188360 245740 220090 293920 381190 340700 264410 359530 254650 158510 305790 359440 190080 233620 304040 109960 316240 272690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 81102000 7407 3851 7008 14074;14075;14076 11303;11304 11303 2 9606 Homo sapiens -0.0073969972447684995 EREEWAK Unmodified 946.45084 0.45084476 2203;3454 B2R4A2;P14927 UQCRB Cytochrome b-c1 complex subunit 7 no no 0 0 1 3 0 1 36.599 36.654 3 0.020013 8260 20230619_1882_Aki_TMTPro18x_K_F3 107.66 62.583 120120 90137 122170 128440 163980 178300 162260 175130 268690 109190 143790 160390 144230 121290 132560 102720 178510 163550 111030 82855 124620 127190 167140 176370 166850 177310 262130 115750 153500 159120 146740 125490 137350 107040 170250 154750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 317190000 7408 2203;3454 7009 14077 11305 11305 1 9606 Homo sapiens -0.0245226265905103 EREEYLAQQK Unmodified 1292.6361 0.63607935 678 H0YIR4;Q05DP9;F8W1J4;H0YHE2;A8K4S8;A0A024RBJ1;Q8WYA0-3;Q8WYA0 IFT81 Intraflagellar transport protein 81 homolog yes no 0 0 1 3 0 1 37.266 37.319 3 0.0022738 8519 20230619_1882_Aki_TMTPro18x_K_F3 88.134 27.967 15276 17108 19035 17108 25692 29646 26045 27767 30358 23782 26256 24158 26950 20430 24379 22198 32878 30245 14187 15651 19120 17456 26171 28983 26368 28366 30500 24270 27147 24388 27355 21318 25289 22734 31357 28652 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23953000 7409 678 7010 14078 11306 11306 1 9606 Homo sapiens 0.0014667534987893305 EREHEFQSK Unmodified 1188.5523 0.55234972 2957 F2Z307;O95670;Q6NVJ2;H0Y474;O95670-3 ATP6V1G2-DDX39B;ATP6V1G2 V-type proton ATPase subunit G 2 yes no 0 0 1 3 0 1 29.572 29.674 4 0.010247 5471 20230619_1882_Aki_TMTPro18x_K_F3 66.19 32.304 44202 24695 56698 72216 65133 67483 68338 77749 74825 50844 85162 89834 58719 64150 73641 28731 85621 87868 40887 23008 56779 68855 66998 68739 68952 78017 76106 54010 85786 88477 61574 65147 75027 32904 81821 82822 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28182000 7410 2957 7011 14079 11307 11307 1 9606 Homo sapiens -0.034384360271587866 ERELEEAR Unmodified 1030.5043 0.5043369 1292;4740 A0A1S5UZ07;Q9Y490;Q9Y4G6;A0A1B0GVU7;G1UI21;H0YMT1;B4DGF3 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 1 1 0 1 29.963 29.963 3 0.00038026 5964 20230619_1880_Aki_TMTPro18x_K_F1 140.45 20.327 97550 46061 86017 108690 142660 148300 118300 138610 188410 114260 162160 160580 137400 133320 123760 69297 179530 160130 89875 42764 89320 104970 143140 146610 122820 141550 186610 118340 166460 159860 140540 135080 128840 75951 171100 151200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140500000 7411 1292;4740 7012 14080 11308 11308 1 9606 Homo sapiens -0.009695099471855428 ERELEEARK Unmodified 1158.5993 0.59929991 1292;4740 A0A1S5UZ07;Q9Y490;Q9Y4G6;A0A1B0GVU7;G1UI21;H0YMT1;B4DGF3 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 2 3 0 1 32.799 32.87 4 0.0063973 6720 20230619_1882_Aki_TMTPro18x_K_F3 79.659 47.136 98425 60281 78086 95747 130350 141590 110210 130340 162240 107510 152900 160180 134540 129710 114130 75120 189340 150550 90712 55535 81908 94298 130860 139370 113890 133240 161720 111580 156510 159050 137110 131930 120320 80743 180170 142330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82164000 7412 1292;4740 7013 14081 11309 11309 1 9606 Homo sapiens 0.0263442352400034 ERELEECQR Unmodified 1247.5564 0.55644882 4688 Q9UNE7;Q9UNE7-2;H3BTA3;H3BS86;H3BUD0 STUB1 E3 ubiquitin-protein ligase CHIP yes no 0 0 1 1 0 1 29.458 29.458 3 2.1157E-08 5780 20230619_1880_Aki_TMTPro18x_K_F1 180.07 78.42 49167 24357 43001 52959 67707 61745 57748 61546 74589 58256 77855 77672 76192 59145 60196 42501 88768 76501 45304 22573 44612 51182 68045 61743 59318 62795 75098 59660 79622 77288 77035 60810 62957 44945 84571 72346 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63914000 7413 4688 7014 14082 11310 11310 1 9606 Homo sapiens -0.057427145957717585 ERELIER Unmodified 943.50869 0.50869399 4252 Q8NE86-3;Q8NE86 MCU Calcium uniporter protein, mitochondrial yes no 0 0 1 2 0 1 32.053 32.113 3 0.0123 6542 20230619_1881_Aki_TMTPro18x_K_F2 98.933 23.079 59294 44657 50983 67126 73888 85794 79421 82180 127590 72596 90477 85491 97335 87218 61765 100570 106650 85581 54737 41075 52946 66134 75227 85203 81169 83929 125560 74417 94768 86356 97529 90559 66116 99903 101470 81522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42603000 7414 4252 7015 14083 11311 11311 1 9606 Homo sapiens 0.03467999266388233 ERELLGK Unmodified 843.48142 0.48141661 644 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8;Q9BSJ8-2 FAM62A;ESYT1 Extended synaptotagmin-1 yes no 0 0 1 5.5 0.5 1 1 40.119 40.209 3 0.027172 9640 20230619_1886_Aki_TMTPro18x_K_F6 82.241 46.622 153150 107120 125190 153630 157150 167880 156310 154650 225600 180100 212060 191330 198000 163240 167310 178070 206950 185160 141270 98500 130140 151420 160840 168350 159740 159610 225170 181110 217380 192810 201060 170130 172910 179100 197470 175870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136250000 7415 644 7016 14084;14085 11312 11312 1 9606 Homo sapiens 0.05341515726013313 ERELQNTVANLHVR Unmodified 1677.8911 0.89106526 1239 Q6IBK3;A8K769;A0A140VK92;O15127;H3BV04;H3BN93;H3BUB6;H3BPL9;B3KU14 SCAMP2 Secretory carrier-associated membrane protein 2 yes no 0 0 1 8 0 1 42.958 42.968 4 2.0932E-11 10676 20230619_1888_Aki_TMTPro18x_K_F8 179.46 143.14 53233 40862 50769 51463 42549 47710 57939 45727 51874 48642 54270 37421 43519 32228 41448 45210 46057 35259 49185 37507 51664 51058 45240 48487 57328 46978 53249 48668 54987 38385 44625 34119 42456 44659 43947 33634 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76288000 7416 1239 7017 14086 11313 11313 1 9606 Homo sapiens 0.0792353681813438 EREMAEIR Unmodified 1032.5022 0.50222841 3482 P20700;E9PBF6;B4DZT3 LMNB1 Lamin-B1 yes no 0 0 1 1.5 0.5 1 1 32.433 32.463 3 0.00062059 6667 20230619_1881_Aki_TMTPro18x_K_F2 126.55 53.758 146630 91480 118330 159090 160750 245990 131270 142890 273080 217030 252170 304140 277050 256780 152880 310370 335900 322540 135160 84374 123500 155950 163770 239500 138410 155070 269180 218300 260880 303110 276440 269110 168600 311230 319520 306270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214230000 7417 3482 7018 14087;14088 11314 11314 1 9606 Homo sapiens -0.012722619566602589 EREMAEMR Oxidation (M) 1066.4536 0.45356365 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8 LMNA Prelamin-A/C;Lamin-A/C yes no 0 1 1 1.5 0.5 1 1 23.124 23.159 3 0.01417 3804 20230619_1880_Aki_TMTPro18x_K_F1 80.755 50.588 192520 102470 134510 219250 297580 377960 235200 344240 570270 248500 313830 369860 323190 278820 216250 293630 409800 358330 177190 94901 144510 213490 295800 368900 250870 350980 550630 260630 334500 366780 324850 291370 232840 298230 389870 339840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 354070000 7418 1428 7019 14089;14090 11315 11315 905 1 9606 Homo sapiens -0.07700498588064875 EREMAEMR Unmodified 1050.4586 0.45864903 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 1 2 0.816 1 1 1 31.058 31.109 3 0.00099406 6121 20230619_1881_Aki_TMTPro18x_K_F2 116.3 94.798 111830 72831 87825 128040 173740 204390 131900 192990 289120 157000 161280 191410 189030 158980 133080 173290 205100 183640 103090 67171 92765 125600 173050 200450 140200 196720 280190 161920 172760 191580 189510 165820 140480 174390 195390 174390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 332560000 7419 1428 7019 14091;14092;14093 11316 11316 1 9606 Homo sapiens -0.06456194725433306 ERENMDTDDER Unmodified 1408.5525 0.55248565 2409 B3KT11;C9JA08;Q96D46;B3KMN5;B4DKU1 NMD3 60S ribosomal export protein NMD3 yes no 0 0 1 1 0 1 26.789 26.789 3 0.00291 4761 20230619_1880_Aki_TMTPro18x_K_F1 79.693 62.667 2832.6 1235.2 2585.9 1804.7 3224.3 4781.7 2561.8 4890.2 3694.9 2369.8 3844.5 3893.2 5021.5 2737.8 5097.8 1841 5560.4 5000.5 2609.7 1139.1 2653.3 1816.2 3293.8 4605.3 2662.9 4909.7 3701.1 2575.8 3990.4 3843.7 5080.7 2826.4 5188.7 2051 5311.8 4718.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7050800 7420 2409 7020 14094 11317 11317 1 9606 Homo sapiens -0.1354484888015577 EREPVELAR Unmodified 1097.5829 0.58292157 3800 Q05B42;Q0D2N8;Q6SZW1-2;Q6SZW1 SARM1 Sterile alpha and TIR motif-containing protein 1 yes no 0 0 1 2 0 1 33.35 33.408 3 3.0856E-05 7022 20230619_1881_Aki_TMTPro18x_K_F2 158.79 114.48 80958 64686 76244 71324 59729 65480 73272 74109 90198 90836 102370 102160 93567 87585 94286 110550 106520 102200 74813 59290 77557 71468 63743 66888 73664 75572 91392 91239 104080 102730 95872 91979 96630 110220 101770 97179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73221000 7421 3800 7021 14095 11318 11318 1 9606 Homo sapiens 0.03803342357900874 EREQCCYNCGKPGHLAR Unmodified 2133.9255 0.92549498 1099 A0A0S2Z4Q3;A0A0S2Z4K2;P62633-2;P62633-8;P62633-5;P62633;P62633-4;P62633-6;P62633-7;P62633-3 CNBP Cellular nucleic acid-binding protein yes no 0 0 2 8 0 1 31.159 31.169 5 3.955E-06 6008 20230619_1888_Aki_TMTPro18x_K_F8 110.22 102.59 13938 7832.8 10234 15235 12715 12350 12560 10760 15652 13642 16585 13647 11835 12381 14705 14680 12553 10673 12835 7240.4 10769 14717 13008 12666 12764 11195 15794 13641 16748 13823 12378 12917 14785 14495 12019 10187 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28786000 7422 1099 7022 14096 11319 11319 1 9606 Homo sapiens -0.09611074419262877 EREQELFNR Unmodified 1219.5945 0.59454889 3122 Q92541;I7GPQ7 RTF1 RNA polymerase-associated protein RTF1 homolog yes no 0 0 1 2.5 0.5 1 1 35.874 35.931 3 1.0649E-08 8031 20230619_1881_Aki_TMTPro18x_K_F2 187.97 104.11 132840 106460 124480 147260 154310 181430 156430 162660 221210 170350 189270 190240 198230 176600 156500 214370 211950 223490 122750 97802 127760 145730 158210 180360 159560 167640 220250 172500 196020 191850 200170 184580 163260 215150 202340 212130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 131060000 7423 3122 7023 14097;14098 11320;11321 11320 2 9606 Homo sapiens -0.0064646061878192995 EREQQDLEFAK Unmodified 1391.6681 0.66810776 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DPM7;O95325 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 1 2.5 0.5 1 1 42.243 42.314 3 0.0023634 10871 20230619_1881_Aki_TMTPro18x_K_F2 83.617 50.209 97692 81373 104660 98390 113300 117060 99752 103570 129440 110740 126820 112160 130270 110050 111780 141960 129740 119070 90397 74638 105810 98233 116610 116680 102330 106920 130040 111640 130270 113860 131980 115240 115150 140780 123880 113380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91005000 7424 2361 7024 14099;14100 11322 11322 1 9606 Homo sapiens -0.012059569669645498 EREQQIEEHR Unmodified 1352.6433 0.64328999 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;B3KSQ7 DBN1 Drebrin yes no 0 0 1 1 0 1 23.087 23.087 4 0.00035412 3787 20230619_1880_Aki_TMTPro18x_K_F1 101.3 77.309 112390 62443 117900 123930 171050 168210 130750 147710 198900 152980 186400 200460 158870 146780 152040 89415 208190 182810 103750 57742 120100 120560 172340 166200 136300 152400 198120 155860 190680 199260 162830 150210 157450 96233 198470 172730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 336160000 7425 1396 7025 14101 11323 11323 1 9606 Homo sapiens -0.018925920496712934 ERESAEQSSGPGPSLRPQNSTTWR Unmodified 2656.259 0.25896825 1307 P48634;A0A1U9X982;A0A1U9X9A9;A0A1U9X999;A0A1U9X998;A0A1U9X993;A0A1U9X988;A0A1U9X996;A0A1U9X985;A0A1U9X977;A0A1U9X975;A0A1U9X974;A0A1U9X9A5;A0A1U9X987;A0A1U9X972;P48634-3;P48634-2;P48634-4;B4DZ56 PRRC2A Protein PRRC2A yes no 0 0 2 6 0 1 36.62 36.688 4 3.8728E-103 8212 20230619_1886_Aki_TMTPro18x_K_F6 346.34 297.25 40543 34481 44615 37978 38434 44541 41884 46278 49751 53100 45971 40621 49939 41173 44585 48894 43809 44921 37530 31597 44849 38188 40518 44588 42306 47307 50131 52914 47481 41831 50575 42876 45413 48779 41931 42704 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87450000 7426 1307 7026 14102 11324;11325 11325 2 9606 Homo sapiens -0.0029108735957379395 ERESIMK Oxidation (M) 907.44332 0.44331654 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 1 1 4.5 0.5 1 1 32.302 32.374 3 0.056843 6397 20230619_1883_Aki_TMTPro18x_K_F4 67.897 19.336 198420 108030 183420 207620 267640 254750 231410 255840 316030 218460 295070 274360 258520 245410 230720 185560 335550 286490 182970 99857 188930 201920 270220 253960 238030 260210 315910 224670 301910 274990 263970 250950 240590 193270 319700 271220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 172100000 7427 543 7027 14103;14104 11326 11326 320 1 9606 Homo sapiens -0.014107382509564559 ERESIMK Unmodified 891.4484 0.44840192 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 1 4.5 0.5 1 1 35.211 35.28 3 0.021624 7635 20230619_1885_Aki_TMTPro18x_K_F5 98.933 52.121 99627 54404 80644 89125 113880 109180 102430 107410 155470 108900 126590 128480 132800 118970 99157 86781 159740 123540 91785 50172 84029 87364 115370 108830 105540 109870 154090 110690 131460 129130 133850 121350 104670 89853 152000 117080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206060000 7428 543 7027 14105;14106 11327 11327 1 9606 Homo sapiens -0.0016643438834762492 ERESLQQMAEVTR Oxidation (M) 1591.7624 0.76241885 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;K7EPW7;A0A7I2V2T6;A2VCQ4;K7EKX1;K7EJ70 PRKCSH Glucosidase 2 subunit beta yes no 0 1 1 2.5 0.5 1 1 33.207 33.272 3 0.0027082 6849 20230619_1882_Aki_TMTPro18x_K_F3 77.726 44.992 39704 32416 36453 37765 55230 53637 44403 54213 61353 36824 52638 51200 47201 39921 45378 47305 45302 52394 36688 29724 37580 37919 55573 53060 45932 54838 61100 38618 54162 50984 48258 41938 46186 47699 43394 49684 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 390180000 7429 444 7028 14107;14108 11328 11328 275 1 9606 Homo sapiens -0.009791862071551805 ERESLQQMAEVTR Unmodified 1575.7675 0.76750423 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;K7EPW7;A0A7I2V2T6;A2VCQ4;K7EKX1;K7EJ70 PRKCSH Glucosidase 2 subunit beta yes no 0 0 1 3.5 0.5 1 1 41.521 41.574 3 5.5362999999999995E-36 10190 20230619_1883_Aki_TMTPro18x_K_F4 269.88 238.54 248410 212880 231880 235220 250940 293140 282820 281150 340660 305020 320120 333350 340410 301950 304440 358760 362340 378830 229630 195070 237280 236570 260240 291770 285070 288640 342880 307950 330370 336100 345230 315470 313710 360570 346240 359550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1096200000 7430 444 7028 14109;14110 11329;11330 11330 2 9606 Homo sapiens 0.002651176554763879 EREVLQLQEEVK Unmodified 1498.7991 0.79912193 4472 Q9BYN8 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 0 0 1 3.5 0.5 1 1 48.897 48.955 3 2.6788E-05 13508 20230619_1883_Aki_TMTPro18x_K_F4 124.48 86.871 63073 50111 64972 67850 72378 75869 74079 70559 76717 94580 105290 113040 119320 98081 82683 113720 118830 134930 58326 46025 65969 67156 74590 75994 74702 73109 79230 94829 107310 113400 119580 102540 86891 115110 113450 127870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 469260000 7431 4472 7029 14111;14112 11331 11331 1 9606 Homo sapiens 0.06967433681074908 ERFAGVDIR Unmodified 1061.5618 0.56179219 3200 M0R210;P62249;M0R3H0;M0R1M5;M0QX76;Q6IPX4;B4DP32 RPS16 40S ribosomal protein S16 yes no 0 0 1 6.5 0.5 1 1 40.542 40.622 3 0.0061933 9768 20230619_1886_Aki_TMTPro18x_K_F6 66.595 26.594 131570 102580 90909 109100 140590 127330 109480 146970 208260 143020 133480 122110 137050 122620 114220 174650 163130 152990 121310 94000 96532 109940 141370 127930 115230 148520 203460 144260 140480 125080 138820 129180 119580 173260 155540 145580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188940000 7432 3200 7030 14113;14114 11332 11332 1 9606 Homo sapiens 0.03347377049021816 ERFDSNCITPGTEFMDNLAK Oxidation (M) 2360.0413 0.041295827 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 1 1 5 0 1 52.725 52.797 3 0.0051004 14970 20230619_1885_Aki_TMTPro18x_K_F5 68.129 59.739 9283.9 10780 11388 9841 10518 13901 12811 10880 14704 15257 12833 10880 13555 10736 9982.4 18192 13427 16260 8623.2 9853.7 11376 10079 11068 13682 12838 11439 14807 15057 13269 11253 13641 11480 10451 18024 12833 15454 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15398000 7433 2350 7031 14115 11333 11333 1458 1 9606 Homo sapiens -0.08432316878042911 ERFDSNCITPGTEFMDNLAK Unmodified 2344.0464 0.046381205 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 0 1 5.5 0.5 1 1 58.479 58.544 3 1.1459E-36 17548 20230619_1886_Aki_TMTPro18x_K_F6 179.87 169.89 40253 34158 42682 42637 36010 63461 43682 48682 67331 56093 45619 53592 68762 47669 38512 76517 58486 71492 37248 31339 43085 42624 38366 62183 44333 50918 66399 56261 48849 54334 67965 50942 41012 76017 55856 67909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101690000 7434 2350 7031 14116;14117 11334;11335 11335 2 9606 Homo sapiens -0.07188013015456818 ERFEEEAR Unmodified 1064.4887 0.48868683 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 1 1.5 0.5 1 1 30.584 30.617 3 0.00097593 6214 20230619_1880_Aki_TMTPro18x_K_F1 115.71 82.337 226160 175340 200770 180190 161840 161790 101190 107710 188770 214580 352780 390340 226140 306240 309640 267390 401110 367300 208860 160640 205200 181450 169730 163970 108620 116840 193680 216510 348990 385220 239610 316070 318190 275110 382660 347930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 399840000 7435 1958 7032 14118;14119 11336 11336 1 9606 Homo sapiens -0.04097796464247949 ERFEFLK Unmodified 967.51272 0.51271674 3485 Q59FI0;Q9HBB2;V9HWB7;P21399 IRP1;HEL60;ACO1 Aconitate hydratase;Cytoplasmic aconitate hydratase yes no 0 0 1 8 0 1 49.027 49.093 3 0.061885 13139 20230619_1888_Aki_TMTPro18x_K_F8 60.478 22.202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7436 3485 7033 14120 11337 11337 1 9606 Homo sapiens 0.027660887600973183 ERFGIVTSSAGTGTTEDTEAK Unmodified 2156.0233 0.023320802 3766 P82979;Q567R9;H0YHG0;A4D286 SARNP;CIP29;LOC402290 SAP domain-containing ribonucleoprotein yes no 0 0 1 4 0 1 44.763 44.807 3 7.3732E-30 11637 20230619_1883_Aki_TMTPro18x_K_F4 202.52 185.23 52137 59125 55108 48294 60172 59951 53817 55214 49814 53523 55115 42334 50392 38144 58666 61250 57371 52473 48348 54005 55753 49893 61852 59707 54546 56668 51223 53829 56034 43424 51939 40728 59453 60676 54871 49950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61970000 7437 3766 7034 14121 11338 11338 1 9606 Homo sapiens -0.008449925368950062 ERGDQTVLILHAK Unmodified 1478.8205 0.82052608 1701 Q06330;D6R927;A0A7P0Z4N7;A0A7P0TBJ4;Q06330-7;Q06330-6;Q06330-4;Q06330-5;A0A7P0T9Y9;A0A7P0T947;B7Z8D8;D6RF98;D6RAT2;D6RA45;A0A7P0TA33;A0A7P0T9W9;D6RCM1;D6RBQ8;D6REP3;D6R946;D6R9K5;A0A7P0T848;A0A7P0T7Z3;D6REC2;D6R9X3;A0A7P0T806;D6RIZ8;A0A7P0T964;D6RB37;A0A7P0T821;D6RIV8 RBPJ Recombining binding protein suppressor of hairless yes no 0 0 1 7.5 0.5 1 1 42.3 42.339 4 0.01596 10216 20230619_1887_Aki_TMTPro18x_K_F7 69.108 47.807 170130 126940 158660 173430 154770 161020 143210 138150 205380 202330 209570 235480 261460 205940 156550 306060 262210 265560 157140 116630 162110 171110 160840 163280 147050 144540 205980 202110 217100 236640 260220 218680 167700 303210 249880 252650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 160320000 7438 1701 7035 14122;14123 11339;11340 11339 2 9606 Homo sapiens 0.10026863500456784 ERGGVINLR Unmodified 1012.5778 0.57777661 4668 Q9UJA5;Q9UJA5-4 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes no 0 0 1 1 0 1 34.849 34.849 3 0.054943 7910 20230619_1880_Aki_TMTPro18x_K_F1 45.161 12.32 34738 24767 32520 33009 41389 41043 41269 44184 45200 38300 40721 45665 40759 42066 40344 37905 50043 48542 32079 22754 33354 32767 42253 40967 41740 44747 45634 39252 42034 45879 41641 43270 41551 38767 47776 45999 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3695200 7439 4668 7036 14124 11341 11341 1 9606 Homo sapiens 0.07199083285934194 ERGLGGEVPGSHQGPDPYR Unmodified 2006.9559 0.95585036 440 K7ELQ9;A0A024R7D3;Q6UW68;K7EM09;K7EPR0 TMEM205;UNQ501 Transmembrane protein 205 yes no 0 0 1 4 0 1 36.089 36.134 4 3.3696E-14 7987 20230619_1883_Aki_TMTPro18x_K_F4 117.03 76.474 58202 43195 50822 59376 63532 59918 65607 67634 78137 56126 68396 58802 65294 59129 51792 68999 68584 64746 53730 39691 52475 58631 64991 60736 66405 68253 78416 57460 70411 59665 66140 61481 53925 68895 65432 61555 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50299000 7440 440 7037 14125 11342 11342 1 9606 Homo sapiens -0.007349331665182035 ERGPYVYR Unmodified 1038.5247 0.52467841 692 F5H5E8;F5H4X0;B4E3I1;A0A0S2Z3N2;B4DZ71;B3KW46;A0A024RBS4;A0A0S2Z3I2;Q59FM4;A0A7P0T9I2;B7ZKQ9;A0A7P0Z4E3;A0A7P0T913;A0A7P0T9B3;Q8WTV0-2;Q8WTV0-4;Q8WTV0;Q8WTV0-5 SCARB1 Scavenger receptor class B member 1 yes no 0 0 1 7 0.816 1 1 1 32.097 32.142 3 0.0021696 6382 20230619_1888_Aki_TMTPro18x_K_F8 112.84 82.272 130210 102660 121830 125480 142030 130710 137430 137220 146940 157110 183950 188150 178190 152250 164540 186900 211710 183940 120310 94193 124740 124950 145610 132010 139180 140280 150670 158610 186770 188410 181440 160030 170270 187040 201910 174840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100540000 7441 692 7038 14126;14127;14128 11343;11344 11344 2 9606 Homo sapiens 0.006957055032899007 ERGTVYFK Unmodified 998.51853 0.5185304 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 1 1.5 0.5 1 1 40.32 40.357 3 0.032034 10243 20230619_1880_Aki_TMTPro18x_K_F1 70.056 26.973 455030 417730 430720 464470 488210 382090 433030 429150 449290 646480 723050 605610 639670 520220 583070 751280 776290 640290 420890 382720 440360 464370 499850 394400 440700 441080 468430 640000 724430 614340 652720 551630 605460 744530 739940 609830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 478230000 7442 3789 7039 14129;14130 11345 11345 1 9606 Homo sapiens 0.01921187271761937 ERHCGELK Unmodified 1027.4869 0.48691269 861 Q6FGS1;Q53GA0;A0A087WYR3;O43399;O43399-5;O43399-7;Q68E05;O43399-2;O43399-4;O43399-3;A0A087WZ51;Q5J908;B4DDV4;O43399-6 TPD52L2;DKFZp686A1765 Tumor protein D54 yes no 0 0 1 5 0 1 27.523 27.595 4 0.024407 4872 20230619_1885_Aki_TMTPro18x_K_F5 68.224 37.653 13263 6183.9 22909 16075 32297 23827 22964 36834 19871 11449 22758 20354 14761 16847 20561 8620.4 21553 22899 12305 5752.7 22553 15535 32422 23802 23648 35994 20494 13181 22860 20159 15622 17056 20794 9633.7 20621 21594 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6378000 7443 861 7040 14131 11346 11346 1 9606 Homo sapiens -0.025731287538292236 ERHDAIFR Unmodified 1042.5308 0.53082642 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;H0YCH5;H0YEC5;H0YD77;H0YCF8;H0YDC0;H0YEN8;H0YD99;H0YEI7;H0YEW3 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 1 4.5 0.5 1 1 28.863 28.936 3 0.0045245 5328 20230619_1885_Aki_TMTPro18x_K_F5 96.331 36.531 46908 25184 38982 45862 56495 60661 55226 56351 73542 51115 44801 47529 49583 43964 44373 46826 63913 49664 43221 23261 40567 44765 57298 60081 56281 57705 72699 51883 47543 48274 50257 45622 46296 47168 60864 47194 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33699000 7444 3752 7041 14132;14133 11347;11348 11348 2 9606 Homo sapiens 0.01126223734809173 ERHPGSFDVVHVK Unmodified 1505.7739 0.77391024 2202 Q96IR1;B2R491;P62701;Q53HV1;C9JEH7;A4FU11;Q496E4;P22090 RPS4X;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 yes no 0 0 1 7 0.816 1 1 1 37.21 37.249 5 5.1041E-07 8367 20230619_1888_Aki_TMTPro18x_K_F8 145.1 125.26 257620 108440 231900 275040 263930 255100 264960 263680 254640 308470 285870 298840 310570 245740 213810 318470 305500 350780 237290 100900 238390 263450 271340 259470 266850 270050 261630 308880 292890 301940 311530 259250 224770 320320 291720 332660 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1058399999.9999999 7445 2202 7042 14134;14135;14136 11349;11350;11351 11351 3 9606 Homo sapiens 0.04125423669165684 ERHQVQLLGR Unmodified 1234.6895 0.68945232 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8;A0A8V8TQ76;A0A8V8TRI2 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 0 1 1 0 1 30.594 30.594 3 0.033093 6245 20230619_1880_Aki_TMTPro18x_K_F1 57.888 35.69 19821 12278 20798 19133 24843 25985 23506 21331 29997 19809 22311 23621 19190 17781 20701 17727 24399 20058 18308 11308 21095 18841 25444 25643 23968 22078 29851 20241 23128 23596 19775 18524 21209 17959 23279 19043 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10932000 7446 117 7043 14137 11352 11352 1 9606 Homo sapiens 0.08149517643073523 ERICSEEER Unmodified 1206.5299 0.52989972 2760 C9JRZ6;A4D1N4;Q9NX63;F8WAR4;A0A286YEX5 CHCHD3 MICOS complex subunit MIC19 yes no 0 0 1 1 0 1 27.435 27.435 3 0.000473 4998 20230619_1880_Aki_TMTPro18x_K_F1 117.7 71.726 12235 8833.1 14715 16349 30728 27690 16514 22110 23102 16407 20140 18346 15092 16233 20465 10461 21277 20176 11324 8148.9 14981 16020 30228 27011 17689 22794 23034 16961 20577 18459 15843 16510 20703 11183 20342 19065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18005000 7447 2760 7044 14138 11353 11353 1 9606 Homo sapiens -0.06510403487072836 ERLDQPMTEIVSR Oxidation (M) 1588.7879 0.78790532 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 1 1 3.5 0.5 1 1 38.284 38.332 3 0.00016606 8904 20230619_1882_Aki_TMTPro18x_K_F3 102.05 69.425 175980 142940 158940 203210 234860 205660 203550 209230 247390 215130 247670 252650 235680 208500 234630 231880 254980 275510 162580 131350 164220 200190 236780 207960 208380 213700 249490 218280 253620 253270 240940 217780 239720 235100 243910 261140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 287070000 7448 134 7045 14139;14140 11354;11355 11354 53 2 9606 Homo sapiens 0.01706288315290294 ERLDQPMTEIVSR Unmodified 1572.793 0.7929907 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 1 4.5 0.5 1 1 45.342 45.403 3 6.8774E-28 11881 20230619_1883_Aki_TMTPro18x_K_F4 249.62 179.52 274610 220540 249380 270410 250050 300730 285910 270260 359770 338560 351060 325600 357120 316710 320570 381570 347460 360390 253700 202340 255600 269370 261010 301060 288450 280070 361940 338260 360650 330980 362650 330350 328460 381060 332280 342480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 915240000 7449 134 7045 14141;14142 11356;11357 11356 2 9606 Homo sapiens 0.029505921779218625 ERLEAEEER Unmodified 1159.5469 0.54692999 2333 B4DYK9;B7ZMH1;B2RWN6;F5H1N7;B7ZVZ4;A0A2R8Y6P1;Q6ZU35;A0A1B0GWF1 KIAA1211 Uncharacterized protein KIAA1211 yes no 0 0 1 1 0 1 29.898 29.898 3 4.7254E-05 5946 20230619_1880_Aki_TMTPro18x_K_F1 135.8 68.069 35147 21863 34183 30547 34318 29720 29033 30220 37835 35399 47533 46705 45454 41838 44504 34063 54707 49644 32444 20109 34765 30133 35449 30147 29883 30986 38415 35849 48215 46722 46436 42910 45770 35267 52210 47005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31690000 7450 2333 7046 14143 11358 11358 1 9606 Homo sapiens -0.02646159609616916 ERLEDLNFPEIK Unmodified 1501.7777 0.77765821 4730 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7;B4DY21 NOC2L Nucleolar complex protein 2 homolog yes no 0 0 1 5 0.816 1 1 1 56.051 56.099 3 2.1556E-05 16314 20230619_1885_Aki_TMTPro18x_K_F5 128.76 87.223 161810 129710 140480 177010 156460 179090 173550 180010 228460 189340 198540 209930 204660 175280 190500 231350 222870 235150 149440 119140 144960 174830 161900 180910 175670 184100 228320 191550 205440 211050 208070 184900 195980 231670 213010 223260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 530940000 7451 4730 7047 14144;14145;14146 11359;11360 11360 2 9606 Homo sapiens 0.046840486523706204 ERLEIER Unmodified 943.50869 0.50869399 4613 Q9NWH9;H7C3F4;A0A024R5U7;A0A024R5X3;Q9NWH9-3 SLTM SAFB-like transcription modulator yes no 0 0 1 2 0 1 33.832 33.889 3 0.039788 7197 20230619_1881_Aki_TMTPro18x_K_F2 75.043 5.4157 52845 44937 53514 54178 73408 66870 68225 64272 102680 71132 76386 73333 82843 67691 66850 87985 92072 82320 48882 41213 54597 54131 74483 66639 70103 66020 101520 71673 79842 74204 83609 71089 69763 87710 87783 78283 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62564000 7452 4613 7048 14147 11361 11361 1 9606 Homo sapiens 0.03467999266388233 ERLEQDLQQMQAK Unmodified 1615.7988 0.79880436 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 5 0 1 49.266 49.343 3 9.9168E-08 13467 20230619_1885_Aki_TMTPro18x_K_F5 151.74 119.24 110780 94157 98964 106690 104670 124600 124090 123320 150180 125560 126530 126200 140500 114710 128740 146530 143850 135130 102370 86304 101670 106980 108930 124600 124760 126110 150510 126850 131550 127740 142390 120390 132040 146050 137430 128500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29448000 7453 3440 7049 14148 11362 11362 1 9606 Homo sapiens 0.01553690689593168 ERLEQEQLER Unmodified 1328.6684 0.66844211 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A8Q3WLE0;A0A075B6E5;A0A0U1RQP7 ENAH Protein enabled homolog yes no 0 0 1 1.5 0.5 1 1 34.33 34.358 3 1.3525E-05 7414 20230619_1881_Aki_TMTPro18x_K_F2 146.16 56.992 332460 264250 304750 352310 359020 389610 367290 379360 475780 411060 429090 418560 423060 352820 372640 466060 477890 424710 307150 242660 312980 348950 369030 390870 373170 389060 476550 414090 442030 422500 429670 372060 386120 463940 455860 404020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 778970000 7454 918 7050 14149;14150 11363;11364 11364 2 9606 Homo sapiens 0.017254627529155186 ERLESLNIQR Unmodified 1256.6837 0.68369824 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 6.5 0.5 1 1 40.034 40.112 2 4.7636E-09 9572 20230619_1886_Aki_TMTPro18x_K_F6 167.93 107.34 40577 32132 35938 39615 43226 43114 44624 40801 52157 40443 47438 44620 44102 41403 43871 48041 51997 49545 37477 29484 37021 39437 44342 43292 45130 41849 52474 41049 48732 45027 45145 43148 45086 48244 49655 47051 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23829000 7455 3152 7051 14151;14152 11365;11366 11365 2 9606 Homo sapiens 0.06562374340751376 ERLYPLRK Unmodified 1073.6346 0.63456321 3583 P42766 RPL35 60S ribosomal protein L35 yes yes 0 0 2 4.5 0.5 1 1 38.258 38.326 4 0.018751 8864 20230619_1883_Aki_TMTPro18x_K_F4 73.208 52.306 165500 240690 178520 139760 228940 151850 177030 201240 180750 174410 155900 111420 153020 107300 137230 194460 171940 98770 153870 219290 180630 150150 231560 154410 181740 201280 183100 175700 160700 116130 155420 115440 142040 188500 163670 95094 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85589000 7456 3583 7052 14153;14154 11367;11368 11367 2 9606 Homo sapiens 0.10069130842475715 ERNGLSLAALK Unmodified 1170.6721 0.67207093 3461 P16401 HIST1H1B Histone H1.5 yes yes 0 0 1 2 0 1 47.708 47.779 3 0.0013832 13418 20230619_1881_Aki_TMTPro18x_K_F2 90.653 29.003 377260 347950 331440 275430 495630 689070 426550 432970 769860 150570 174330 133890 188500 154290 195170 152020 149430 147960 348770 317950 342830 289770 501950 659300 444040 452070 739080 168420 207160 137800 192460 158410 195580 152740 143400 140580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 380650000 7457 3461 7053 14155 11369 11369 1 9606 Homo sapiens 0.09356177317408765 ERNTDQASMPDNTAAQK Oxidation (M) 1891.833 0.83301761 148;1719 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;A0A494C024;A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 1 1 2.5 0.5 1 1 30.816 30.892 3 7.0437E-06 6057 20230619_1881_Aki_TMTPro18x_K_F2 98.062 87.428 29857 10773 22346 24781 31950 39176 29052 40171 50181 38253 45238 56179 53505 52302 26879 42888 70463 57890 27454 10016 23488 24038 32444 38498 30123 40870 49694 39334 47032 56043 53177 53559 30283 44049 66911 54872 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40499000 7458 148;1719 7054 14156;14157 11370;11371 11370 71 2 9606 Homo sapiens -0.07722557680131104 ERNTDQASMPDNTAAQK Unmodified 1875.8381 0.83810299 148;1719 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;A0A494C024;A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 0 1 3 0 1 35.008 35.069 3 3.5736E-18 7568 20230619_1882_Aki_TMTPro18x_K_F3 173.19 157.95 30046 12786 20544 26013 27361 40583 24817 35168 53070 43776 45714 54624 56049 47746 27709 45131 65446 59198 27627 11848 21805 25338 27984 39750 26049 36487 52157 44141 47703 54678 55572 49356 30846 46131 62210 56100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69984000 7459 148;1719 7054 14158 11372 11372 1 9606 Homo sapiens -0.06478253817499535 ERNVEDLSGGELQR Unmodified 1600.7805 0.78051176 3692 P61221;D6R9I9 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 0 1 2 0.816 1 1 1 39.111 39.171 3 8.8477E-07 9419 20230619_1881_Aki_TMTPro18x_K_F2 132.44 91.862 372690 294480 332910 365840 331360 341760 394370 359320 448970 449040 510030 435250 480670 461690 486070 507920 539980 474300 344240 270230 341660 363320 345930 347940 395650 368420 456620 448700 518690 443740 492140 477560 497250 507810 515680 451090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 948540000 7460 3692 7055 14159;14160;14161 11373;11374 11374 2 9606 Homo sapiens 0.004152720392539777 ERPAGADSLSWGAGPR Unmodified 1625.791 0.79101686 4556 Q9NP58-4;Q9NP58;U3THN0;U3TJJ6;A0A1D9ITY9;B4E055 ABCB6 ATP-binding cassette sub-family B member 6, mitochondrial yes no 0 0 1 7 0 1 41.922 41.993 3 6.6325E-08 10086 20230619_1887_Aki_TMTPro18x_K_F7 124.04 101.12 48380 40174 53381 46360 46435 62330 59661 60467 68075 52417 64987 58749 58048 49896 60187 52463 64901 63903 44778 36832 53685 46549 49214 61743 59659 61668 68663 53623 66485 59081 59573 51911 61381 53347 62044 60577 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67290000 7461 4556 7056 14162 11375 11375 1 9606 Homo sapiens 0.003152994843048873 ERPAYAVHGNMLHYVK Oxidation (M) 1899.9414 0.94138627 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITV3;A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 1 1 1.5 0.5 1 1 37.038 37.068 5 1.3945E-05 8571 20230619_1881_Aki_TMTPro18x_K_F2 98.281 78.184 33390 26255 32621 31755 38403 37688 36160 35792 41664 33085 43242 36970 40192 31321 39747 39147 46785 41863 30861 24087 33276 31703 39342 37631 36765 36624 42157 33715 44119 37205 41082 32925 40807 39368 44662 39751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66303000 7462 3647 7057 14163;14164 11376 11376 2335 1 9606 Homo sapiens 0.02741323151622055 ERPAYAVHGNMLHYVK Unmodified 1883.9465 0.94647165 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITV3;A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 1 2.5 0.5 1 1 41.217 41.285 5 1.5387E-05 10150 20230619_1882_Aki_TMTPro18x_K_F3 108.18 81.402 107570 89502 105810 107220 81598 115470 121180 110690 124330 135270 108940 109310 125940 111780 111290 154690 149990 135150 99462 82087 107330 106960 87913 115970 119970 114090 125970 134610 113260 112260 127400 117470 115800 153530 143030 128630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210380000 7463 3647 7057 14165;14166 11377 11377 1 9606 Homo sapiens 0.03985627014230886 ERPDCLDTVLAR Unmodified 1443.714 0.71401209 590 A0A024R9R3;Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes no 0 0 1 4 0 1 44.208 44.252 3 0.00020458 11388 20230619_1883_Aki_TMTPro18x_K_F4 104.41 83.553 37923 33058 39942 40758 63769 48937 45316 45139 54408 55891 62714 76350 62888 60553 67331 62198 63239 79714 35096 30322 40738 40638 63694 48841 47050 46669 55283 56526 64071 75982 64425 63049 68140 63477 60661 75467 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51551000 7464 590 7058 14167 11378 11378 1 9606 Homo sapiens 0.009903649436182604 ERPDLPPIQYEPVLCSR Unmodified 2068.0412 0.041159893 2974 F5H365;Q15436;B4DSQ5;G3V4V1;G3V1W4;G3V3G5;G3V2R6;G3V5X8;G3V4Q2 SEC23A Protein transport protein Sec23A yes no 0 0 1 6 0 1 53.284 53.361 3 4.5000000000000004E-30 15302 20230619_1886_Aki_TMTPro18x_K_F6 231.37 204.48 39946 37611 38494 38697 38265 42647 48157 43202 51040 49226 53538 50841 54783 47015 56387 58263 56338 56350 36961 34433 39229 39070 40029 42857 48061 44269 51922 49482 54864 51437 55949 49214 57318 58259 53904 53542 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 449770000 7465 2974 7059 14168 11379 11379 1 9606 Homo sapiens 0.049860959749366884 ERPDLPPVQYEPVLCSR Unmodified 2054.0255 0.025509829 1375 B4DRA5;B4DJW8;A0A2R8YFH5;Q15437;Q5QPE2 SEC23B Protein transport protein Sec23B yes no 0 0 1 6 0 1 50.843 50.92 3 8.179E-30 14302 20230619_1886_Aki_TMTPro18x_K_F6 221.91 196.97 35898 27574 35044 40474 35242 41229 41442 44449 46734 41172 43444 36943 44202 34477 36899 48832 44267 47001 33174 25353 35711 39810 36778 41684 41597 45090 47162 41660 44711 37664 44729 36423 38125 48698 42302 44651 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53473000 7466 1375 7060 14169 11380 11380 1 9606 Homo sapiens 0.04065809457870273 ERPEGETGDLGK Unmodified 1286.6103 0.61025853 1857 A0A8V8TR54;Q12873;Q12873-3;B4DLC6;B4DKV1;B3KWV4;Q2TAZ1 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 0 0 1 2 0 1 36.042 36.099 3 0.076985 8144 20230619_1881_Aki_TMTPro18x_K_F2 43.761 18.908 22335 12802 19373 22381 26969 27361 25032 24343 34146 25771 36798 34194 30487 28684 29493 24816 36284 36483 20592 11814 20056 21859 27364 27211 25626 25120 34327 26246 37329 34145 31290 29566 30356 25670 34652 34527 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17012000 7467 1857 7061 14170 11381 11381 1 9606 Homo sapiens -0.0215821889239578 ERPFYGR Unmodified 923.46135 0.46134987 3842 Q9NUF9;Q13232 c371H6.2;NME3 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase 3 yes no 0 0 1 7 0.816 1 1 1 32.177 32.222 3 0.016486 6405 20230619_1888_Aki_TMTPro18x_K_F8 89.369 59.562 83763 69108 91583 100060 109300 105790 106930 120700 130980 103100 148530 161150 142000 136450 121950 113130 152150 170530 77517 63513 92686 98564 111960 106880 108740 121790 132610 106920 151330 160070 144300 140300 125980 117320 145410 161300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116350000 7468 3842 7062 14171;14172;14173 11382;11383 11383 2 9606 Homo sapiens -0.0034423521395865464 ERPGFPPR Unmodified 954.50355 0.50354903 755 Q9UN86;Q9UN86-2;A0A024RDE5;A0A024RDB2;A8K6V7;A0A7I2YQD9;A0A7I2V3P9;A0A7I2V3E2;A0A7I2V647;A0A7I2V382;A0A7I2V3Z6;A0A7I2V547 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 1 7.75 0.433 1 3 33.848 33.872 3 0.010476 7460 20230619_1888_Aki_TMTPro18x_K_F8 82.452 49.19 115820 86031 126810 131730 142960 138400 134020 145300 146970 143500 182850 211640 184210 166010 136470 134040 213680 204060 107120 79152 128150 129330 146790 139600 136140 147930 150400 147150 186100 210020 185800 171070 143840 139160 203640 193110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 70451000 7469 755 7063 14174;14175;14176;14177 11384;11385;11386 11385 3 9606 Homo sapiens 0.02447740194418202 ERPGLGSENMDR Unmodified 1359.6201 0.62011171 4199 Q86XP3;Q86XP3-2;B3KTL4;B3KX23;T2DQ69;B3KV84;B3KMI4 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 0 1 2.5 0.5 1 1 32.498 32.564 3 6.5665E-05 6693 20230619_1881_Aki_TMTPro18x_K_F2 117.93 85.603 32591 16491 26974 27023 36001 35782 32863 33660 41657 32321 38461 39626 41223 36322 35522 41660 42745 38002 30022 15215 27999 26528 36593 35462 33585 34490 41786 32981 39735 39800 41731 37839 36652 41562 40795 36150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97758000 7470 4199 7064 14178;14179 11387 11387 1 9606 Homo sapiens -0.04531354158666545 ERPGSEEPPAEPVSFYTQPFSHYGQALCVSFPQPCR Unmodified 4150.8942 0.89418467 4514 Q9H4A4;A6NKB8;Q7RU04;A0A087WU27;A0A087WUS4 RNPEP Aminopeptidase B yes no 0 0 1 8 0 1 61.192 61.224 4 5.5195E-17 18299 20230619_1888_Aki_TMTPro18x_K_F8 132.34 124.28 46163 35759 34681 40918 31009 29097 41710 33910 31942 42615 44958 49023 49199 41889 44216 49386 49915 55576 42583 32791 36162 40756 32743 30462 41134 34593 33653 42765 45738 49223 49839 43848 45394 49838 47743 52700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76411000 7471 4514 7065 14180 11388;11389 11388 2 9606 Homo sapiens -0.05522665974604024 ERPLCPLQPQNR Unmodified 1506.7725 0.77253003 1549 A0A494C0R8;K7EIG1;O75153;I3L2B0 CLUH Clustered mitochondria protein homolog yes no 0 0 1 8 0 1 36.414 36.4 3 0.020823 8045 20230619_1888_Aki_TMTPro18x_K_F8 63.164 39.313 106460 85222 94308 104890 125270 150570 132920 124710 162430 80727 78313 70603 78945 59596 82650 78907 83583 65641 98331 78193 97377 104870 128030 148140 134360 128010 160200 83815 84306 71832 80722 62883 84002 78263 79838 62553 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34606000 7472 1549 7066 14181 11390;11391 11390 2 9606 Homo sapiens 0.03941466308742747 ERPMYGR Unmodified 907.43342 0.43342056 3617 P50402;A0A804HIV7;Q5HY57 EMD Emerin yes no 0 0 1 6 0 1 28.126 28.158 3 0.032872 5135 20230619_1886_Aki_TMTPro18x_K_F6 66.993 52.999 39917 24822 42400 35641 51801 46230 42939 44642 54624 47861 54463 61243 59514 46912 52218 46142 61086 60438 36874 22838 42946 35252 52750 45926 44186 45790 54977 48610 56147 61034 60212 48853 53678 47205 58357 57256 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21542000 7473 3617 7067 14182 11392 11392 1 9606 Homo sapiens -0.02399881465692033 ERPPAPSSFVFQEETK Unmodified 1847.9054 0.90537792 3790;4031 Q5CZB5;Q02952-3;Q02952-2;Q02952 DKFZp686M0430;AKAP12 A-kinase anchor protein 12 no no 0 0 1 5.33 0.471 2 1 49.975 50.051 3 2.4398E-08 13943 20230619_1886_Aki_TMTPro18x_K_F6 137.73 101.34 115510 94232 94637 98090 59024 81389 87321 83863 102410 121110 118690 132050 121210 101650 141070 134730 130000 168590 106650 86320 97363 98591 65090 83650 86930 86553 104190 120680 121270 132470 124540 107680 142470 136750 124750 159630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 413620000 7474 4031;3790 7068 14183;14184;14185 11393;11394 11394 2 9606 Homo sapiens 0.015341444557407158 ERPPEEVAAR Unmodified 1152.5887 0.58873523 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;C9J406;Q3B7X4;B4E2B5;Q05DN3 IMMT MICOS complex subunit MIC60 yes no 0 0 1 1.5 0.5 1 1 29.879 29.913 3 2.5256E-05 5912 20230619_1880_Aki_TMTPro18x_K_F1 152.07 106.07 29064 20476 30744 31785 37480 40281 40515 37855 49389 32271 42217 43050 42006 34399 36773 36841 48686 41173 26864 18846 31204 31267 38474 40015 40928 38699 49454 33274 43643 42928 42636 35901 38139 37230 46416 39088 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 452420000 7475 3954 7069 14186;14187 11395;11396 11395 2 9606 Homo sapiens 0.018544408695561287 ERPPNPIEFLASYLLK Unmodified 1886.0302 0.030184502 4479 Q9C005 DPY30 Protein dpy-30 homolog yes yes 0 0 1 5.5 0.5 1 1 66.101 66.144 3 2.616E-11 20804 20230619_1886_Aki_TMTPro18x_K_F6 162.59 95.792 28353 20595 23125 24861 19618 21753 19665 23949 26956 23786 29390 29217 22581 25492 30610 31395 30066 33522 26159 18900 23876 24723 20686 22287 20077 24309 27122 24214 29752 29306 23687 26700 30962 31571 28796 31804 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34686000 7476 4479 7070 14188;14189 11397 11397 1 9606 Homo sapiens 0.12261061662957218 ERPQETEDPDHCLG Unmodified 1681.7002 0.70021252 3011 H0YJU8;G3V5Q5;Q9BU02 THTPA Thiamine-triphosphatase yes no 0 0 1 1 0 1 34.005 34.005 3 0.011577 7564 20230619_1880_Aki_TMTPro18x_K_F1 55.196 44.091 12608 11390 13253 13177 16790 15914 13448 14680 13282 14701 16714 18090 18207 13067 14810 17640 19001 19954 11671 10440 13456 13200 17046 15866 13759 15080 13690 14950 17060 18041 18359 13899 15367 17772 18146 18924 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36814000 7477 3011 7071 14190 11398 11398 1 9606 Homo sapiens -0.11336957346134113 ERPSQPEGLR Unmodified 1167.5996 0.59963426 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 1 3.5 0.5 1 1 29.465 29.551 3 0.0001113 5400 20230619_1883_Aki_TMTPro18x_K_F4 134.3 84.886 105570 62461 85221 99289 103430 127520 108120 111690 164200 125110 131940 130100 155580 122370 105530 137290 141780 132950 97295 57555 88643 97535 106390 126350 110420 115520 162720 126000 137830 131610 155630 127310 110360 137400 135240 126360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205370000 7478 1676;2901 7072 14191;14192 11399 11399 1 9606 Homo sapiens 0.02253843243852316 ERPSQPEGLRK Unmodified 1295.6946 0.69459728 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 2 7 0.816 1 1 1 32.069 32.113 4 0.0034201 6347 20230619_1888_Aki_TMTPro18x_K_F8 81.676 54.195 134750 99037 119830 131920 150690 152400 146610 153990 184950 175780 193080 195820 199530 163140 170350 189970 212880 180760 124400 90976 123490 130770 153960 152610 149250 157750 186570 177100 197980 196760 202040 170780 176170 189930 203050 171900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 493310000 7479 1676;2901 7073 14193;14194;14195 11400;11401 11400 2 9606 Homo sapiens 0.058577767150154614 ERPSSAIYPSDSFR Unmodified 1610.7689 0.76888444 1584 A0A8Q3SIN5;D3DVA5;V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;B4DJ49;B7Z977;V9GYF5;V9GYG5;V9GZ14 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 0 0 1 6.5 0.5 1 1 41.037 41.118 3 1.4516E-08 9981 20230619_1886_Aki_TMTPro18x_K_F6 153.24 126.51 44179 34983 41601 44068 47053 47457 38109 41407 47907 50618 52644 50633 51973 43626 51047 57160 53140 50648 40823 32107 42554 43797 48194 47609 39279 42962 48473 50662 53749 51180 53015 45940 52073 56844 50807 48184 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150560000 7480 1584 7074 14196;14197 11402 11402 1 9606 Homo sapiens -0.012069249841260898 ERPTPSLNNNCTTSEDSLVLYNR Unmodified 2679.2559 0.25585671 3402 P07814;V9GYZ6;Q3KQZ8;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 1 5.5 0.5 1 1 47.031 47.11 3 5.683500000000001E-103 12622 20230619_1886_Aki_TMTPro18x_K_F6 342.3 318.86 55842 44966 58115 61982 47124 56911 60110 62588 53944 70529 61961 67906 71739 59137 67190 84919 71027 79718 51648 41307 58710 61127 50169 58041 59707 63762 55719 70721 63681 68765 72679 62660 68718 84571 67982 75740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 427030000 7481 3402 7075 14198;14199 11403;11404;11405 11405 3 9606 Homo sapiens -0.01660098528554954 ERPTSLNVFPLADGTVR Unmodified 1870.9901 0.9901106 856 A0A669KB35;Q9UPT6;A0A087WYG2;B7ZMF3;E9PFH7;G1UI24;Q9UPT6-2;Q68CV8 MAPK8IP3;DKFZp762N1113 C-Jun-amino-terminal kinase-interacting protein 3 yes no 0 0 1 1 0 1 53.579 53.579 3 0.00048644 15859 20230619_1880_Aki_TMTPro18x_K_F1 74.87 56.037 36025 29923 39943 39595 32672 40418 38309 38944 44483 43805 46679 49003 42198 42471 42267 47865 43312 52984 33345 27472 40141 39204 34693 40760 38514 40025 45048 44170 47612 49282 43256 44286 43073 48285 41498 50235 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33408000 7482 856 7076 14200 11406 11406 1 9606 Homo sapiens 0.08945514992319659 ERQEQLER Unmodified 1086.5418 0.54178503 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A8Q3WLE0;A0A0U1RQP7 ENAH Protein enabled homolog yes no 0 0 1 1 0 1 23.216 23.216 3 0.00076211 3843 20230619_1880_Aki_TMTPro18x_K_F1 135.71 51.214 111730 51138 155030 159750 232050 241080 180740 245890 195100 127760 231300 250750 174660 177590 205070 72915 231140 244460 103360 47778 155050 153260 233320 237450 185860 247490 199010 139160 233320 246290 181680 180110 208680 85004 220990 230320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 185170000 7483 918 7077 14201 11407;11408 11408 2 9606 Homo sapiens 0.001975813184344588 ERSEELSEAER Unmodified 1333.611 0.61098681 1285 A0A1K0FUB6;Q8WWM9;K7EMC7 CYGB Cytoglobin yes no 0 0 1 1 0 1 30.141 30.141 3 3.5279E-09 6018 20230619_1880_Aki_TMTPro18x_K_F1 184.34 104.52 102190 77868 84604 83600 80433 67352 107080 103240 119340 117590 91919 65125 130090 75744 67393 122230 99505 60314 94319 71369 87324 83843 84462 70259 106770 103350 119880 116460 97011 68990 128380 80353 71692 118460 94624 58087 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 852950000 7484 1285 7078 14202 11409 11409 1 9606 Homo sapiens -0.042474242433627296 ERSEELSEAERK Unmodified 1461.7059 0.70594983 1285 A0A1K0FUB6;Q8WWM9;K7EMC7 CYGB Cytoglobin yes no 0 0 2 2 0.816 1 1 1 33.336 33.379 4 7.4192E-13 7020 20230619_1881_Aki_TMTPro18x_K_F2 197.19 122.73 510280 437120 507180 392110 396570 361050 505350 508480 685250 678380 481730 378930 764190 437240 294790 985730 742650 494430 471960 399880 513010 400170 423260 371460 508820 513470 680510 667430 514790 401510 747870 478580 336480 952020 704510 475730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 632620000 7485 1285 7079 14203;14204;14205 11410;11411;11412 11411 3 9606 Homo sapiens -0.006434907721768468 ERSGVSLAALK Unmodified 1129.6455 0.64552182 1927;3462;3463 Q4VB24;A3R0T8;P10412;A3R0T7;B2R984;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 no no 0 0 1 1.67 0.471 1 2 44.833 44.875 3 0.0026492 12080 20230619_1881_Aki_TMTPro18x_K_F2 81.565 48.445 267960 395500 293490 179140 448050 302780 249510 294410 323660 137650 167480 173110 163920 136670 185270 134530 182480 177940 249210 359950 297290 201330 446410 297800 265540 296890 318970 148880 179130 172980 168480 142130 187570 137830 174590 168560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216110000 7486 1927;3462;3463 7080 14206;14207;14208 11413;11414 11413 2 9606 Homo sapiens 0.0858848842608495 ERTEEPMETEPK Oxidation (M) 1490.6559 0.65588809 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y7I0;A0A2R8Y7M9;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y6G9 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 1 1 1.5 0.5 1 1 32.425 32.455 3 0.00010572 6956 20230619_1880_Aki_TMTPro18x_K_F1 116.19 96.082 124370 93884 121360 137570 163530 175680 153130 163680 186680 157950 195820 187360 187080 165840 152430 178300 218000 179970 114920 86326 124270 135770 166250 174430 156050 167840 188520 160890 199980 188210 189670 172380 159350 179020 207680 171060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143330000 7487 1005 7081 14209;14210 11415;11416 11415 568 2 9606 Homo sapiens -0.06981361492330507 ERTEEPMETEPK Unmodified 1474.661 0.66097347 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y7I0;A0A2R8Y7M9;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y6G9 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 1 1.5 0.5 1 1 35.868 35.896 3 8.4135E-07 8333 20230619_1880_Aki_TMTPro18x_K_F1 146.96 129.26 210850 168350 207850 201900 227610 246170 223040 219860 311400 252000 285410 278380 305870 244480 229590 306540 340260 285500 194920 154430 211640 201760 234860 245000 227880 227280 311020 253940 294770 280380 307920 256610 241310 305650 324110 271590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 232540000 7488 1005 7081 14211;14212 11417;11418 11417 2 9606 Homo sapiens -0.057370576296989384 ERTNEGVIEFR Unmodified 1348.6735 0.67352749 1567 A0A590UJK4;A0A590UK01;A0A590UJP7;Q59GY3;A8K588;A0A590UK80;Q13247-3;Q13247;V9HVZ0 SRSF6;HEL-S-91 Serine/arginine-rich splicing factor 6 yes no 0 0 1 3 0.816 1 1 1 39 39.054 3 6.1444E-09 9182 20230619_1882_Aki_TMTPro18x_K_F3 154.36 116.66 144300 128600 124470 138670 175480 180500 157710 175640 243010 167810 164840 147310 167140 135290 140110 183880 162630 148730 133360 117800 128930 139800 177870 179300 162610 179430 239440 169560 172730 150200 169240 142520 144430 181910 155280 141690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 658270000 7489 1567 7082 14213;14214;14215 11419 11419 1 9606 Homo sapiens 0.013137666154989347 ERVEAGDVIYIEANSGAVK Unmodified 2019.0273 0.027283968 1442 B5BUB1;A0A384MTR5;Q9Y265;Q9Y265-2;E7ETR0;B3KRS7;H7C4I3 RUVBL1 RuvB-like 1 yes no 0 0 1 4 0 1 52.334 52.358 2 1.0653E-10 15065 20230619_1883_Aki_TMTPro18x_K_F4 133.71 124.98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7490 1442 7083 14216 11420 11420 1 9606 Homo sapiens 0.05853141747502377 ERVEELEHR Unmodified 1195.5945 0.59454889 854 A0A087WYC0;A0A8I5KT73;A0A1W2PQY5;A0A8I5KNZ1;A0A8I5QJQ7;A0A6Q8KRG2;B7ZC06;A0A8I5KZ68;A0A8J9BZL8;Q08379;Q08379-2;Q5HYE0;Q5PXD5 GOLGA2;DKFZp686K0319 Golgin subfamily A member 2 yes no 0 0 1 1 0 1 30.428 30.428 3 0.0045083 6176 20230619_1880_Aki_TMTPro18x_K_F1 80.24 43.683 16065 13143 13879 17282 19458 21179 17256 19818 26528 18294 21363 22283 22717 19903 19244 21664 27376 20734 14838 12067 14384 17156 19732 21086 17811 20292 26269 18710 22221 22363 22993 20694 20088 21687 26068 19728 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7932900 7491 854 7084 14217 11421 11421 1 9606 Homo sapiens 0.004575393812501716 ERYEAAIQR Unmodified 1134.5782 0.57817054 3967 Q3KQU3-4;B3KU03;Q6NX58;D3DPS3;Q3KQU3;Q3KQU3-2;C9JIR3 MAP7D1;RPRC1 MAP7 domain-containing protein 1 yes no 0 0 1 4.5 0.5 1 1 32.849 32.919 3 0.0048247 6709 20230619_1883_Aki_TMTPro18x_K_F4 68.626 46.096 66400 49823 71135 72597 88448 93814 80887 88703 99295 72470 87529 98624 87871 79416 77053 66950 105950 97066 61403 45810 72132 71700 90280 93112 82580 90513 99560 74944 90438 98218 89222 81902 80071 69210 101030 91908 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48812000 7492 3967 7085 14218;14219 11422 11422 1 9606 Homo sapiens 0.01626458215105231 ERYGISSMIQSQEKPDR Unmodified 2022.9793 0.97928792 1207 A0A140VJW5;P14868;Q53R85 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 2 7.5 0.5 1 1 44.008 44.059 4 3.2631E-06 11111 20230619_1888_Aki_TMTPro18x_K_F8 110.85 96.23 107650 118720 118080 92847 108470 111430 114830 127420 108370 140850 120720 112990 135940 104180 142310 146250 152370 136970 99834 108410 118770 96359 113470 111790 115330 129320 111480 140680 123950 115720 138500 110060 145170 145750 145590 130250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126220000 7493 1207 7086 14220;14221 11423 11423 1 9606 Homo sapiens 0.008717445557522296 ERYPTFIDALR Unmodified 1379.7197 0.7197494 2315 B5MCF9;B2RDF2;O00541;O00541-2 PES1 Pescadillo homolog yes no 0 0 1 1 0 1 52.327 52.327 3 0.00070704 15279 20230619_1880_Aki_TMTPro18x_K_F1 95.507 60.62 38036 25935 34778 35621 27110 45146 39171 40765 56928 49165 39096 51181 57898 50329 39023 71255 62588 73130 35109 23840 35512 35294 29251 44777 39336 42159 56289 49332 41835 51837 57646 53052 41495 71263 59729 69401 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69744000 7494 2315 7087 14222 11424 11424 1 9606 Homo sapiens 0.04507831517594241 ERYQEVLDK Unmodified 1178.5932 0.5931519 237 A0A024R3D4;Q8ND24;E9PN76;Q8ND24-2 DKFZp547C195;RNF214 RING finger protein 214 yes no 0 0 1 4 0 1 42.327 42.371 3 0.0043279 10574 20230619_1883_Aki_TMTPro18x_K_F4 82.803 44.782 139270 113220 139530 147710 175610 168930 157770 162550 217390 168750 201250 170750 159010 141470 155720 179730 189730 159210 128780 103940 142280 146600 178980 169120 161950 166650 217240 170370 205150 172410 163560 148860 160410 178790 180990 151550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84060000 7495 237 7088 14223 11425 11425 1 9606 Homo sapiens 0.010999052924717034 ERYSYVCPDLVK Unmodified 1527.7392 0.73916421 622 P61158;A0A024RAI1;Q59FV6;B4DXW1;B4DT29;B4DTI0 ACTR3 Actin-related protein 3 yes no 0 0 1 7 0 1 48.048 48.137 3 0.00020052 12740 20230619_1887_Aki_TMTPro18x_K_F7 104.81 70.121 166990 171870 176800 172790 231120 207750 187660 197480 210780 157750 160450 123250 129860 116450 164830 169970 214400 130780 154740 157270 179500 175000 234220 207410 192480 201330 211330 160600 165480 126690 135320 123120 169730 167740 204070 124940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109690000 7496 622 7089 14224 11426 11426 1 9606 Homo sapiens -0.003595802538029602 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR Unmodified 3245.7044 0.70444027 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 1 6.5 0.5 2 2 50.91 50.987 3;4 4.3164E-52 14047 20230619_1887_Aki_TMTPro18x_K_F7 225.56 206.02 41265 29609 34587 37395 36775 37682 39793 41699 43324 42607 49768 44917 38120 38877 46921 45430 49453 62501 38076 27186 35735 37135 38100 38181 40071 42343 44174 43073 50232 45313 39739 40651 47695 46499 47382 59135 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 407770000 7497 1328 7090 14225;14226;14227;14228 11427;11428;11429 11428 3 9606 Homo sapiens 0.17141622927465505 ESAFEFLSSA Unmodified 1086.487 0.4869555 3570 V9HWF2;P40925;P40925-3;P40925-2;B9A041;B8ZZ51 HEL-S-32;MDH1 Malate dehydrogenase;Malate dehydrogenase, cytoplasmic yes no 0 0 0 3.5 1.12 1 1 1 1 64.507 64.524 2 1.5281E-07 20216 20230619_1883_Aki_TMTPro18x_K_F4 192.11 177.69 303070 255930 286510 303060 309760 294300 314360 342720 399310 341490 359820 358530 349890 305870 308820 357460 387680 426280 280170 234680 292800 302200 319820 299550 319400 346680 400270 345730 370530 361440 355620 320060 319380 362070 370440 404010 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1609999999.9999998 7498 3570 7091 14229;14230;14231;14232 11430;11431;11432;11433 11432 4 9606 Homo sapiens -0.052828502728289095 ESAGADTRPTVRPR Unmodified 1511.7805 0.78045218 3307 O75489;Q53FM7;E9PS48;O75489-2;G3V194 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes no 0 0 2 5.5 0.5 1 1 24.959 25.01 4 2.4491E-08 3872 20230619_1885_Aki_TMTPro18x_K_F5 148.41 91.975 36181 33461 35689 40353 51931 54429 49117 42242 61852 38350 48611 41968 49663 37039 37794 44075 50529 44816 33479 30680 36570 40355 52575 53699 50037 43911 61679 39141 50480 42317 50070 38766 39375 44203 48183 42579 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 356890000 7499 3307 7092 14233;14234 11434;11435 11434 2 9606 Homo sapiens 0.04503316829868709 ESAINVAEGK Unmodified 1016.5138 0.51383895 4673 Q9UJZ1;A0A087WYB4;Q9UJZ1-2;Q6ZNW0;F2Z2I8 STOML2 Stomatin-like protein 2, mitochondrial yes no 0 0 0 4 0 1 44.992 45.036 2 0.0014057 11739 20230619_1883_Aki_TMTPro18x_K_F4 129.39 64.676 64856 50542 51727 69509 69756 80069 74369 77099 106020 86193 94713 98839 97069 82505 91900 97843 100690 98329 59852 46433 54030 68733 71267 80070 75657 79204 105700 87052 97832 99208 98761 86446 94057 98095 96234 93397 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41314000 7500 4673 7093 14235 11436 11436 1 9606 Homo sapiens 0.006242583383368583 ESALASADLEEEIHQK Unmodified 1768.8479 0.84792262 1470 A0A384NL74;P42696;A2A2V2;P42696-2 RBM34 RNA-binding protein 34 yes no 0 0 0 1.5 0.5 1 1 51.224 51.246 3 4.9893E-26 14863 20230619_1880_Aki_TMTPro18x_K_F1 234.21 208.65 25039 22008 25723 24232 23170 25472 25216 26457 28617 28531 26648 31054 34292 23381 29049 29767 29891 29123 23169 20165 26024 24322 24323 25695 25425 27013 28902 28792 27798 31132 34467 24733 29680 29775 28586 27671 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212180000 7501 1470 7094 14236;14237 11437 11437 1 9606 Homo sapiens -0.005747425404933892 ESALTLACYK Unmodified 1154.5642 0.56415996 4207;3056 Q8IWZ3-6;Q8IWZ3-4;Q8IWZ3;E9PDP5;Q8TEF1;Q8IWZ3-2;Q8IWZ3-5;D6RHC4;Q8IWZ3-3;H0YM23;O75179-6;O75179-7;O75179-2;O75179;B4DTP3;O75179-3;O75179-4;O75179-5 ANKHD1;FLJ00246;ANKRD17 Ankyrin repeat and KH domain-containing protein 1;Ankyrin repeat domain-containing protein 17 no no 0 0 0 8 0 1 53.478 53.551 2 0.040561 15074 20230619_1888_Aki_TMTPro18x_K_F8 78.816 58.296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7502 4207;3056 7095 14238 11438 11438 1 9606 Homo sapiens -0.006939553281881672 ESAPGLIIATGSVGK Unmodified 1398.7718 0.77184455 242 A0A024R3H2;Q92673 SORL1 Sortilin-related receptor yes no 0 0 0 8 0 1 55.982 56.044 3 0.063351 16157 20230619_1888_Aki_TMTPro18x_K_F8 50.158 35.492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7503 242 7096 14239 11439 11439 1 9606 Homo sapiens 0.08840950140665882 ESAQPPAHL Unmodified 948.46649 0.46649483 3124 J3KNF4;O14618 CCS Copper chaperone for superoxide dismutase yes no 0 0 0 2 0 1 37.518 37.578 2 0.0048447 8718 20230619_1881_Aki_TMTPro18x_K_F2 88.954 72.012 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7504 3124 7097 14240 11440 11440 1 9606 Homo sapiens -0.009799761420026698 ESAREEEEAEQER Unmodified 1590.6758 0.67577191 3237 O15240 VGF Neurosecretory protein VGF;Neuroendocrine regulatory peptide-1;Neuroendocrine regulatory peptide-2;Antimicrobial peptide VGF[554-577] yes yes 0 0 1 1 0 1 29.165 29.165 3 1.9925E-11 5660 20230619_1880_Aki_TMTPro18x_K_F1 190.27 182.55 31742 19588 30319 32061 6508.4 6055 22844 21735 23751 43484 29034 23745 47807 20880 16946 36790 29945 21868 29295 18052 30564 31019 9072.8 8458 22147 21724 24462 42126 30284 24898 46596 22563 18598 35819 28470 20959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47338000 7505 3237 7098 14241 11441 11441 1 9606 Homo sapiens -0.09593894227964483 ESAREEEEAEQERR Unmodified 1746.7769 0.77688294 3237 O15240 VGF Neurosecretory protein VGF;Neuroendocrine regulatory peptide-1;Neuroendocrine regulatory peptide-2;Antimicrobial peptide VGF[554-577] yes yes 0 0 2 1 0 1 27.054 27.054 4 1.1109E-07 4853 20230619_1880_Aki_TMTPro18x_K_F1 144.68 118.96 9113.5 6646.9 11243 9132 2440 3778.3 5013.5 5701.9 8635.4 10589 8515.1 8621.1 15561 6293.2 5615.6 15878 9357.9 7778.1 8437.5 6108.1 11095 8955 3311.2 4270.7 5035.5 5828.2 8604 10374 9035.8 8773.2 15140 7095.3 6148.2 15316 8906.5 7479.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31419000 7506 3237 7099 14242 11442 11442 1 9606 Homo sapiens -0.06663442525268692 ESARQDEGKEEEPEADQEHA Unmodified 2282.9523 0.9523407 3467 Q5U058;P17677;P17677-2 GAP43 Neuromodulin yes no 0 0 2 1.5 0.5 1 1 31.959 31.99 4 9.0814E-55 6746 20230619_1880_Aki_TMTPro18x_K_F1 232.6 225.95 120600 111630 110990 118520 38403 30515 47469 53170 50324 66157 90787 83854 71715 61871 94968 78682 103270 73652 111530 102230 112420 118070 45824 38193 47649 53271 52707 66624 90404 83619 74904 65403 96516 78578 98523 70117 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 285280000 7507 3467 7100 14243;14244 11443;11444 11443 2 9606 Homo sapiens -0.1378173731231982 ESAWTKPDGVK Unmodified 1216.6088 0.60880197 1699 A0A7P0T8N8;O14776-2;O14776;G3V220;B7Z921 TCERG1 Transcription elongation regulator 1 yes no 0 0 1 7.5 0.5 1 1 45.177 45.234 3 0.00022122 11406 20230619_1887_Aki_TMTPro18x_K_F7 96.604 66.546 347750 347190 390320 379740 384730 507570 443610 430970 494580 493470 518710 510100 524640 404990 490450 476550 567140 510100 322320 317960 392960 382620 402190 501680 445500 447170 501960 495890 531280 513430 533400 425260 503440 479700 541500 484350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 347730000 7508 1699 7101 14245;14246 11445;11446 11445 2 9606 Homo sapiens 0.009161918095060173 ESCDSALR Unmodified 936.39709 0.39709463 3638 P52907;A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 yes no 0 0 0 1.5 0.5 1 1 31.175 31.208 2 8.433E-07 6451 20230619_1880_Aki_TMTPro18x_K_F1 203.19 153.15 97057 44770 107450 110630 156630 155440 121540 157190 150410 106010 147980 172530 131360 137260 148890 58689 173410 178440 89581 41609 109010 106780 157730 153700 125560 158980 151330 111930 151420 170710 135610 138630 151930 67252 165710 168190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 140190000 7509 3638 7102 14247;14248 11447;11448 11447 2 9606 Homo sapiens -0.07364803153063804 ESCLEAYTGIVQGLK Unmodified 1666.8236 0.82362212 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 0 0 7 0 1 62.27 62.305 3 1.9576E-10 18848 20230619_1887_Aki_TMTPro18x_K_F7 145.71 121.52 85901 70759 65234 103800 81007 78329 93192 83362 105700 141330 114680 131030 158680 118730 97788 152340 153120 184290 79276 65041 68452 101680 83191 81278 93599 86432 107580 139360 119210 132980 157600 124810 103870 154130 146180 174580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 970030000 7510 3904 7103 14249 11449 11449 1 9606 Homo sapiens 0.016883257722611233 ESDAMFAAER Oxidation (M) 1141.471 0.47098786 1103 O14964;A0A7I2V3F9;A0A7I2V5A3;A0A7I2V3Z1;A0A7I2V6E0;A0A7I2V2K2;A0A7I2V5A2;A0A7I2V3I8;A0A7I2V2D8;A0A7I2V2W5;A0A7I2V2R9;A0A7I2V3J3;A0A0S2Z4R4;A0A7I2V637;B4E1E2;A0A0S2Z4Q4;O14964-2;A0A7I2YQD1;A0A7I2V307;I3L1P5;B4DFP5;A0A7I2V4X6;A0A7I2V628 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 1 0 1 0 1 37.039 37.039 2 0.0090804 8800 20230619_1880_Aki_TMTPro18x_K_F1 74.267 45.868 37603 30847 34250 43889 52408 48261 48377 42464 58044 47412 53328 53582 51389 42647 48272 53986 60779 59904 34745 28345 35395 43276 52834 48353 49275 43940 58369 47865 54852 53752 52371 44963 49862 54380 58026 56838 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42389000 7511 1103 7104 14250 11450 11450 678 1 9606 Homo sapiens -0.09408879781426549 ESDDGTEELEVR Unmodified 1377.5896 0.58958267 2679 B7Z4J7;F5H039;B7Z2B5;Q9NQX3;Q9NQX3-2;B7Z374;B2RDJ7 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 1 0 1 41.334 41.334 2 2.7546E-17 10680 20230619_1880_Aki_TMTPro18x_K_F1 220.82 174.69 31346 20690 27533 36878 24491 33335 27749 29037 39583 33576 35586 47536 38980 35833 32508 37492 48007 49426 28921 19084 28301 35822 25850 33840 28163 30107 39480 34126 36919 47175 39407 37431 34051 38303 45793 46814 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24082000 7512 2679 7105 14251 11451 11451 1 9606 Homo sapiens -0.08410854062731232 ESDGFREEK Unmodified 1095.4833 0.4832671 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 1 1.5 0.5 1 1 35.578 35.607 3 0.0017892 8214 20230619_1880_Aki_TMTPro18x_K_F1 94.804 73.34 171970 88737 203550 245600 312230 321610 258280 290040 337180 215500 328540 309920 261160 261680 269510 127550 334270 315660 158890 82609 206020 235720 314120 318410 266000 296420 338110 224890 334400 308540 269380 264500 276660 141370 319080 297890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 378480000 7513 4629 7106 14252;14253 11452;11453 11452 2 9606 Homo sapiens -0.0606552004671812 ESDGGAGDLEDPW Unmodified 1346.5263 0.52625413 3314 O75688-2 PPM1B Protein phosphatase 1B yes yes 0 0 0 1 0 1 60.529 60.529 2 0.0001995 18722 20230619_1880_Aki_TMTPro18x_K_F1 135.79 128.94 13920 9458.4 12372 14463 11742 15665 14803 14348 16119 17447 17619 16741 16408 13522 17979 18866 18003 24350 12846 8705.4 12704 14201 12353 15706 14790 14834 16411 17442 17953 16922 16855 14351 18264 19172 17269 23046 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9597200 7514 3314 7107 14254 11454 11454 1 9606 Homo sapiens -0.1331479477994435 ESDTGLAPPALWDLAADK Unmodified 1868.9156 0.91560825 1235 C9JX88;A0A140VK70;P35998;Q75L23;C9JLS9;B7Z571 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 5 0 1 63.803 63.849 3 0.019102 19698 20230619_1885_Aki_TMTPro18x_K_F5 49.537 37.371 39808 35722 53588 45262 41795 41993 49856 50323 43791 59484 54513 49806 51114 55669 53202 62956 58091 77122 36937 32772 53057 44917 44464 42917 49662 51072 45455 59298 55264 51222 52459 57603 54395 63904 55666 73031 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265910000 7515 1235 7108 14255 11455 11455 1 9606 Homo sapiens 0.01590707390323587 ESDVGFIPTSGLSGENLITR Unmodified 2091.0484 0.048413341 2136 Q9Y450;Q9Y450-4;B3KNB9;A8K9E1;D9YZV0;B7Z524;J3QT46;H0YES5;H0YDX7;B7Z1K2 HBS1L HBS1-like protein yes no 0 0 0 5 0 1 61.705 61.754 2 0.00011263 18689 20230619_1885_Aki_TMTPro18x_K_F5 115.82 101.91 18138 15260 18088 22724 14959 18216 16660 18025 24154 21363 25121 25416 23401 20762 25781 29142 26097 26550 16775 14028 18359 22262 15859 18748 16943 18529 24204 21540 25659 25474 24057 22001 26211 28995 24969 25244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63427000 7516 2136 7109 14256 11456 11456 1 9606 Homo sapiens 0.04653107056310546 ESDVPLKTEEFEVTK Unmodified 1749.8673 0.86726108 4314 Q969H8;M0QXF7;M0QYN0 MYDGF Myeloid-derived growth factor yes no 0 0 1 5 0.816 1 1 1 53.15 53.206 3 0.00017193 15469 20230619_1883_Aki_TMTPro18x_K_F4 94.717 77.228 234430 163970 193620 194770 189140 188100 220560 204890 200530 248060 279920 198720 207280 159330 281750 172630 164600 131070 216270 150470 200000 194170 197500 191200 220030 209330 208650 246720 279880 202750 217050 166410 278130 171360 158380 125050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 496910000 7517 4314 7110 14257;14258;14259 11457 11457 1 9606 Homo sapiens 0.022322137503806516 ESDWDGIIACHQGK Unmodified 1614.7097 0.709655 962 A0A0A0MTB8;Q8NI36 WDR36 WD repeat-containing protein 36 yes no 0 0 0 5 0 1 49.675 49.751 3 5.3221E-05 13672 20230619_1885_Aki_TMTPro18x_K_F5 98.368 83.682 35102 27842 35511 40990 34472 37832 39684 42638 45640 51725 46144 47927 51574 40902 41647 55198 53988 54959 32455 25597 36057 40261 36028 38595 39909 43462 46227 51650 47561 48583 51985 43200 43280 55181 51542 52199 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29681000 7518 962 7111 14260 11458 11458 1 9606 Homo sapiens -0.07311144269965553 ESDWNQHK Unmodified 1042.4468 0.44682202 621 B7Z6Y2;A0A024RAF1;A0A024RAJ2;A0A024RAI5;A0A024RAI6;A0A024RAI4;A0A024RAF0;A0A024RAE9;A0A024RAG8;A0A024RAF6;A0A024RAJ3;A0A024RAG9;O00499-2;O00499-5;O00499-3;O00499-6;O00499-11;O00499-4;O00499-8;O00499-7;O00499-10;O00499-9;O00499;Q9BTH3;B7Z2Z2 BIN1 Myc box-dependent-interacting protein 1 yes no 0 0 0 3 0 1 35.457 35.514 3 0.021318 7766 20230619_1882_Aki_TMTPro18x_K_F3 67.563 28.541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7519 621 7112 14261 11459 11459 1 9606 Homo sapiens -0.0727035215277283 ESDYFTPQGEFR Unmodified 1474.6365 0.63647328 4269 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 0 0 0 2.5 0.5 1 1 51.344 51.402 2 8.9624E-07 14734 20230619_1882_Aki_TMTPro18x_K_F3 160.61 125.39 55030 43856 52262 54034 48411 67749 57559 53686 74178 69062 70359 68341 77038 62215 59994 84666 65062 80061 50855 40240 53292 53903 50982 67110 58014 56234 74469 68987 72623 69238 77582 65578 61730 84384 62306 76036 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119770000 7520 4269 7113 14262;14263 11460 11460 1 9606 Homo sapiens -0.08185949720927965 ESEAQISWFAPEDHGYGTEVSTK Unmodified 2567.1452 0.14522685 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5;E7EWK3 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 0 0 4 0 1 56.756 56.761 4 0.010704 16984 20230619_1883_Aki_TMTPro18x_K_F4 57.147 49.343 51290 42018 44394 50766 49870 63308 56320 54227 57420 58034 58353 63330 61681 50356 52476 68748 62089 70046 47374 38542 45806 50703 51613 62836 56441 56131 58490 58604 60004 63612 62403 53353 54148 68808 59369 66487 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79765000 7521 4503 7114 14264 11461 11461 1 9606 Homo sapiens -0.07565995245204249 ESEDFIVEQYK Unmodified 1385.6351 0.6350763 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 2 0.816 1 1 1 55.236 55.257 3 1.7654E-12 16459 20230619_1882_Aki_TMTPro18x_K_F3 170.89 139.05 409610 338200 362730 391650 347050 416370 403380 386510 464500 494690 480820 434680 498060 419560 442910 514280 655100 482470 378420 310090 372350 391510 363680 418500 405390 399850 470630 492370 492970 443640 505390 438350 463370 513320 623550 459220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1113400000 7522 3892 7115 14265;14266;14267 11462;11463;11464 11464 3 9606 Homo sapiens -0.042315838096556035 ESEEANEDLRR Unmodified 1346.6062 0.60623578 1791 Q14789-2;A0A8Q3SHP0;Q14789;Q14789-3;Q14789-4;A0A8J9C4H3;E7EU81;A0A8Q3WKE2;A0A8Q3SHI9;C9J8Q0;A0A8Q3SHH2;A0A8Q3WK92;A0A8Q3WKA7;H0Y867;A0A8Q3SHQ4;A0A8Q3WLC9;A0A8Q3SHQ5;H7C5I7;A0A8Q3SHM0;A0A8Q3SHH5;A0A8Q3SHQ9 GOLGB1 Golgin subfamily B member 1 yes no 0 0 1 1 0 1 29.872 29.872 3 4.5389E-17 5925 20230619_1880_Aki_TMTPro18x_K_F1 224.03 192.31 18436 9297.4 15936 21187 28662 30378 21630 27917 32481 21633 29048 36342 33561 33077 21192 20532 41467 36666 16988 8622.6 16618 20507 28594 29938 22555 28503 32308 22671 30191 36077 33574 33558 22876 21747 39446 34672 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37231000 7523 1791 7116 14268 11465 11465 1 9606 Homo sapiens -0.05320308386126271 ESEEGNPVR Unmodified 1015.4571 0.45705235 2579 B4DRS4;O43719 HTATSF1 HIV Tat-specific factor 1 yes no 0 0 0 1 0 1 29.725 29.725 2 0.0031249 5874 20230619_1880_Aki_TMTPro18x_K_F1 113.71 96.78 6441.6 2626.4 7372.4 9145.2 16363 17432 12522 9777.4 14514 8111 12128 17199 12988 12690 9540.3 4415.5 15343 15199 5944.8 2462.8 7559.4 8782.4 16176 16808 12893 10482 14559 8582.4 12624 16860 13081 12804 10051 5193.5 14623 14323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5451500 7524 2579 7117 14269 11466 11466 1 9606 Homo sapiens -0.05005789218182599 ESEEPNQGNNAAADTGHR Unmodified 1895.7994 0.7994093 4527 Q9H7Z3 NRDE2 Protein NRDE2 homolog yes yes 0 0 0 1 0 1 27.23 27.23 3 4.0065E-07 4920 20230619_1880_Aki_TMTPro18x_K_F1 117.18 111.97 0 0 0 1174.1 798.83 0 0 996.35 0 0 0 1830.9 885.2 0 1011.6 0 1325 806.42 0 0 0 1069.9 738.22 0 0 922.35 0 0 0 1706 876.76 0 1037.4 0 1261.1 759.3 0 0 0 1 1 0 0 1 0 0 0 1 1 0 1 0 1 1 9472800 7525 4527 7118 14270 11467 11467 1 9606 Homo sapiens -0.1126584312767136 ESEFCSSSNTR Unmodified 1302.5146 0.51464359 2377 B3KPM6;O94830-2;O94830 DDHD2 Phospholipase DDHD2 yes no 0 0 0 2 0 1 33.895 33.952 2 1.6757E-07 7254 20230619_1881_Aki_TMTPro18x_K_F2 169.65 138.16 13845 7087.3 15608 16567 20354 20129 12856 17017 24127 14829 21689 26140 23554 17439 19791 9979.3 26480 25736 12785 6575.4 15777 15977 20568 20000 13759 17537 23813 15464 22470 25692 23788 17911 20502 11063 25266 24280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14304000 7526 2377 7119 14271 11468 11468 1 9606 Homo sapiens -0.12451315074940794 ESEFDDEPK Unmodified 1094.4404 0.44039923 1525 A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 0 0 0 1 0 1 43.056 43.056 2 2.524E-06 11417 20230619_1880_Aki_TMTPro18x_K_F1 214.29 189.51 177410 129030 154360 177870 223190 235730 211620 215190 292220 218870 249350 238290 248010 225600 207770 222530 285290 242500 163750 118580 159900 176290 226190 233480 216430 221290 291190 221800 257650 240620 251450 232930 216320 224790 271920 230270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105650000 7527 1525 7120 14272 11469 11469 1 9606 Homo sapiens -0.1030433489479492 ESEGLYGQPGDETYQDIFR Unmodified 2202.9706 0.97055695 3915 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 1.5 0.5 1 1 60.325 60.33 3 0.010082 18619 20230619_1880_Aki_TMTPro18x_K_F1 58.564 53.854 30461 31569 32781 31047 36108 39241 40232 38204 36761 31141 34686 24368 31625 22940 43484 33838 27162 30488 28231 28882 33151 31533 37322 39052 40217 38905 37542 31651 35515 25056 32891 24308 43057 33671 26169 28981 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 275300000 7528 3915 7121 14273;14274 11470 11470 1 9606 Homo sapiens -0.08280950599692005 ESEGTLLLSR Unmodified 1103.5823 0.58225287 2375 Q5SZR4;B3KPI5;B4DZR8;Q9Y2W6-3;Q9Y2W6 TDRKH Tudor and KH domain-containing protein yes no 0 0 0 3 0 1 46.608 46.686 2 0.00052533 12631 20230619_1882_Aki_TMTPro18x_K_F3 142.36 74.867 152090 129830 150550 179400 197370 241600 236730 219580 250180 210670 239370 249350 253320 200330 206630 240980 242560 277290 140660 119240 154040 177820 202510 238940 236670 225620 253520 214620 246750 249740 255800 210520 213120 243430 231970 262860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53801000 7529 2375 7122 14275 11471 11471 1 9606 Homo sapiens 0.03460502918187558 ESEITDEDIDGILER Unmodified 1732.8003 0.80030372 2629 B7ZAX9;B4DZC0;O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 1 0 1 59.203 59.203 2 8.409000000000001E-25 18180 20230619_1880_Aki_TMTPro18x_K_F1 229.54 198.11 27815 25769 23417 33525 22417 30590 27859 26004 26699 30439 32001 27815 36408 27543 24842 29614 24289 27558 25707 23645 24207 33157 23559 31035 27742 27023 27494 30445 32736 28358 36433 28546 25462 29602 23267 26184 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44286000 7530 2629 7123 14276 11472 11472 1 9606 Homo sapiens -0.03678441531315002 ESENLASGDQPR Unmodified 1301.5848 0.58477206 454 A0A024R7I5;Q9NXH9-2;Q9NXH9;K7EQQ8;A0A024R7G3;B4DHS5;K7EMZ2 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes no 0 0 0 1 0 1 33.84 33.84 3 0.00015367 7533 20230619_1880_Aki_TMTPro18x_K_F1 104.04 87.664 15904 9555.1 14888 17295 18269 23737 20076 18809 21428 16537 20764 24798 19474 16478 20421 18654 24193 24726 14674 8819.6 15281 16894 18786 23376 20172 19502 21704 17092 21311 24504 19966 17390 20946 19056 23115 23418 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12821000 7531 454 7124 14277 11473 11473 1 9606 Homo sapiens -0.05395693414811831 ESEPQAAAEPAEAK Unmodified 1426.6576 0.65760265 3759 P80723;P80723-2 BASP1 Brain acid soluble protein 1 yes no 0 0 0 2 0.816 1 1 1 38.942 38.982 3 1.9167E-09 9579 20230619_1880_Aki_TMTPro18x_K_F1 167.03 151.39 397250 240830 492980 415950 424500 490130 346260 353470 372280 408930 606540 641040 545610 552660 498650 328080 726670 646740 367470 222130 491200 406440 444210 486580 355170 372260 387030 417410 608790 636660 557230 561060 519420 351800 692520 611200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1160100000 7532 3759 7125 14278;14279;14280 11474;11475 11474 2 9606 Homo sapiens -0.038659844120502385 ESESAPGDFSLSVK Unmodified 1451.678 0.67800374 1416 A0A384ME16;Q6ICN0;B0LPF3;P62993;B3KR50;J3KT38 GRB2 Growth factor receptor-bound protein 2 yes no 0 0 0 3 0.816 1 1 1 53.472 53.505 3 1.951E-05 15588 20230619_1883_Aki_TMTPro18x_K_F4 113.25 96.679 164110 165500 164360 191030 182850 196460 192080 209310 224770 182200 210910 195570 176570 168540 180480 204520 191280 198780 151970 151640 167380 190920 188690 198590 194190 212190 226390 186030 215450 197150 181620 176540 184200 204570 182970 188830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 613820000 7533 1416 7126 14281;14282;14283 11476 11476 1 9606 Homo sapiens -0.029768137522296456 ESESCDCLQGFQLTHSLGGGTGSGMGTLLISK Oxidation (M) 3342.5166 0.51664078 1424;3870 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;Q9UGA2;A1L195;A1L196;Q13885;B2R6L0;A5D907;A5D906 TUBB2B;DKFZp566F223;TUBB2A Tubulin beta-2B chain;Tubulin beta-2A chain no no 0 1 0 7.5 0.5 1 1 60.39 60.43 4 3.4190999999999996E-40 17975 20230619_1887_Aki_TMTPro18x_K_F7 200.52 194.23 46306 39851 47098 63929 54518 54888 54081 59564 53691 45979 45751 47344 47241 41462 41573 50415 47724 57890 42838 36666 47984 62411 55971 56277 54560 60179 54401 47232 47395 47817 47916 43446 42767 50906 45673 54868 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220000000 7534 1424;3870 7127 14284;14285 11477;11478 11477 891 2 9606 Homo sapiens -0.06091687445950811 ESFAEMNR Oxidation (M) 998.41274 0.4127447 3445 P13073;H3BN72;H3BNV9;H3BPG0 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes no 0 1 0 1.5 0.5 1 1 34.008 34.036 2 0.015287 7600 20230619_1880_Aki_TMTPro18x_K_F1 88.954 73.455 168240 139770 164620 197850 281580 285600 236640 263620 458010 179270 241390 233100 203840 193080 222440 168210 220470 215360 155550 128410 169480 196060 282280 281580 247760 268440 444380 187950 256100 232880 210340 199110 225450 172290 210930 204070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 292830000 7535 3445 7128 14286;14287 11479;11480 11479 2083 2 9606 Homo sapiens -0.08652516636016117 ESFAEMNR Unmodified 982.41783 0.41783007 3445 P13073;H3BN72;H3BNV9;H3BPG0 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes no 0 0 0 2 0.816 1 1 1 40.014 40.056 2 0.0012678 9668 20230619_1882_Aki_TMTPro18x_K_F3 145.34 128.38 360640 318460 357220 403440 494560 553510 507870 516080 862050 420450 492550 489030 456210 413640 467330 454810 517920 453010 333610 292180 365610 402320 503930 547330 521680 527110 841780 433130 521050 490920 467720 431160 477710 456400 494600 430530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 378730000 7536 3445 7128 14288;14289;14290 11481;11482 11482 2 9606 Homo sapiens -0.07408212773407286 ESFDGSVR Unmodified 895.40356 0.40356022 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V699;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 0 2 0.816 1 1 1 37.128 37.166 2 2.1813E-10 8840 20230619_1880_Aki_TMTPro18x_K_F1 221.56 131.86 232750 169520 233870 244560 293660 301540 273280 299580 647500 299350 332690 268700 284930 243990 303430 253270 334980 304080 215070 155870 238420 241500 300370 300510 287940 306000 624620 302470 353480 273480 293400 253120 309670 257390 319990 288390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4175699999.9999995 7537 1658 7129 14291;14292;14293 11483 11483 1 9606 Homo sapiens -0.0483254193003404 ESFESQFLADTER Unmodified 1557.6947 0.69471644 898 A0A590UJ56;A0A590UJR3;A0A590UJ50;A0A090N7U0;Q13616;A0A590UJ21;B3KTW0;A0A590UJC4;B4DLA3 CUL1 Cullin-1 yes no 0 0 0 1.5 0.5 1 1 57.116 57.125 2 1.0998E-11 17440 20230619_1881_Aki_TMTPro18x_K_F2 222.2 203.67 43516 37692 41639 44868 42319 47793 49634 49583 52898 56143 49709 46961 61243 48479 51268 66832 55707 57410 40238 34562 42490 44770 44107 48150 49724 50696 53624 56106 51639 48179 61645 50942 52640 66290 53269 54622 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120360000 7538 898 7130 14294;14295 11484 11484 1 9606 Homo sapiens -0.06182312866280881 ESFLVTGSQDCTVK Unmodified 1569.7345 0.73447277 3820 Q12788;A0JLS5;J3KNP2 TBL3 Transducin beta-like protein 3 yes no 0 0 0 5 0 1 52.566 52.64 3 5.9201E-12 14879 20230619_1885_Aki_TMTPro18x_K_F5 184.11 155.56 89522 69494 86278 90837 95430 91149 100240 89872 116850 112840 123990 115330 123800 90627 110290 136790 122880 113970 82727 63810 88064 89983 98437 92159 101290 92557 118380 112880 126800 116200 125620 96767 113230 135360 117390 108530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160290000 7539 3820 7131 14296 11485 11485 1 9606 Homo sapiens -0.02760509187214666 ESFNPESYELDK Unmodified 1456.6358 0.63580458 3614 P49903-2;P49903;Q5T5U6;P49903-4 SEPHS1 Selenide, water dikinase 1 yes no 0 0 0 3.5 1.12 1 1 1 1 55.219 55.254 3 4.2197E-06 16477 20230619_1882_Aki_TMTPro18x_K_F3 127.71 109.35 201100 170920 190990 207770 222810 239480 233390 229710 250300 241480 245380 254340 275340 227540 236820 287630 266290 293300 185920 156770 195440 207220 229150 239560 235230 235660 253910 243820 253360 256770 278210 238820 243410 288240 254690 278420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 406070000 7540 3614 7132 14297;14298;14299;14300 11486;11487;11488 11487 3 9606 Homo sapiens -0.07424789160631917 ESFREQDIYLPIANVAR Unmodified 2020.0378 0.037789075 671 F8VSL3;A0A024RBG7;P25208 NFYB Nuclear transcription factor Y subunit beta yes no 0 0 1 7 0 1 57.002 57.058 3 6.2793E-30 16633 20230619_1887_Aki_TMTPro18x_K_F7 226.79 196.81 49560 42312 45245 46154 43114 47003 50973 49061 52297 51388 54471 44736 55520 43968 52633 54153 54769 54918 45806 38769 46294 46332 45159 47531 50989 50045 53288 51608 55772 45738 56469 45946 53698 54294 52383 52153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27470000 7541 671 7133 14301 11489 11489 1 9606 Homo sapiens 0.06857169192585388 ESFSLVQVQPGVDIIR Unmodified 1785.9625 0.96249887 731 P46379-3;P46379;P46379-2;A0A7I2V508;A0A0G2JK23;A0A024RCR6;A0A1U9X7A6;A0A1U9X7A9;A0A7P0MQS5;P46379-5;A0A0G2JL47;P46379-4 BAG6;BAT3 Large proline-rich protein BAG6 yes no 0 0 0 7 0 1 62.089 62.125 3 2.5849E-08 18772 20230619_1887_Aki_TMTPro18x_K_F7 134.25 106.84 63599 52975 54189 59475 49363 64565 62852 61489 63086 70801 72952 65178 68040 68298 62290 77389 76840 74821 58743 48556 55804 59609 52108 64821 62614 63280 64672 70881 74118 66569 69406 70787 64329 77440 73365 71100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 371880000 7542 731 7134 14302 11490 11490 1 9606 Homo sapiens 0.10095611732117504 ESGASVDEVAR Unmodified 1118.5204 0.52038089 1169 F8VQZ7;A0A140VJE3;P50579-2;P50579;P50579-3;G3V1U3;B3KWL6;F8VSC4 METAP2 Methionine aminopeptidase 2;Methionine aminopeptidase yes no 0 0 0 1 0 1 35.012 35.012 2 1.2598E-08 7985 20230619_1880_Aki_TMTPro18x_K_F1 180.67 160.05 37309 17222 29325 44779 51478 89260 39499 49944 106820 46038 57538 86946 95776 89237 30927 88373 183850 205210 34344 16022 30918 43410 51830 85822 42544 53602 102870 48190 63100 86456 93734 92082 41332 95108 174580 193600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54844000 7543 1169 7135 14303 11491 11491 1 9606 Homo sapiens -0.03413848500963468 ESGLQAAHPNSIFLIDHAWTCR Unmodified 2522.2125 0.21247575 307 A0A024R4U3;Q14166;Q9BR23 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 1 0 1 54.925 54.925 4 1.5329E-37 16355 20230619_1880_Aki_TMTPro18x_K_F1 229.89 216.06 29267 26969 32387 37071 32572 40702 38485 44409 46998 37306 35609 42696 37963 34475 41239 41006 40279 46704 27108 24761 32682 36648 34014 40941 38730 44905 46921 38251 37236 42804 38847 36175 41825 41422 38593 44275 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164230000 7544 307 7136 14304 11492 11492 1 9606 Homo sapiens 0.012258012754045922 ESGPPHMK Oxidation (M) 897.40145 0.40145173 478;2084 Q9NUL3;Q4LE57;Q9NUL3-2;Q9NUL3-4;Q9NUL3-7;Q9NUL3-3;Q9NUL3-6;Q9NUL3-8;A0A024R7X7;Q2TBD5;E7EVJ4;E7EPX0;A8K276;E5RJN7;B7Z1P6;E7EVI1;A8K622;Q59F99;O95793-2;O95793-3;O95793;Q5JW30;Q6PJX3;Q5JW28 STAU2;STAU2 variant protein;STAU1 Double-stranded RNA-binding protein Staufen homolog 2;Double-stranded RNA-binding protein Staufen homolog 1 no no 0 1 0 4 0 1 27.881 27.955 3 0.038914 4843 20230619_1883_Aki_TMTPro18x_K_F4 52.716 35.69 6325.4 3974.2 7026.4 7424.3 10287 8409.5 5916.1 6178.3 6679.1 6272.3 8136.3 8065.9 8116.1 5490.5 8011.1 4610.6 8669.8 8130.7 5845.8 3669.2 7124.1 7219 10286 8381 6248.5 6471.3 6822.9 6389 8278.7 8014.1 8268.1 5713.3 8164.5 4855.4 8285.1 7687.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1923800 7545 478;2084 7137 14305 11493 11493 295 1 9606 Homo sapiens -0.05135293939497387 ESGPPHMK Unmodified 881.40654 0.40653711 478;2084 Q9NUL3;Q4LE57;Q9NUL3-2;Q9NUL3-4;Q9NUL3-7;Q9NUL3-3;Q9NUL3-6;Q9NUL3-8;A0A024R7X7;Q2TBD5;E7EVJ4;E7EPX0;A8K276;E5RJN7;B7Z1P6;E7EVI1;A8K622;Q59F99;O95793-2;O95793-3;O95793;Q5JW30;Q6PJX3;Q5JW28 STAU2;STAU2 variant protein;STAU1 Double-stranded RNA-binding protein Staufen homolog 2;Double-stranded RNA-binding protein Staufen homolog 1 no no 0 0 0 4 0 1 33.67 33.724 3 0.021228 7016 20230619_1883_Aki_TMTPro18x_K_F4 63.673 25.123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7546 478;2084 7137 14306 11494 11494 1 9606 Homo sapiens -0.038909900768885564 ESGPSGIETELR Unmodified 1273.615 0.61500956 962 A0A0A0MTB8;Q8NI36 WDR36 WD repeat-containing protein 36 yes no 0 0 0 1.5 0.5 1 1 43.891 43.933 2 8.1428E-14 11634 20230619_1881_Aki_TMTPro18x_K_F2 217.45 166.85 128750 102510 95722 131130 117460 145650 132010 127530 143610 147520 156730 155910 171390 131740 159630 175600 170090 182890 118780 94095 100560 130180 120890 145720 132590 132100 146210 148270 160840 157130 173800 139090 163200 176110 162730 173590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139110000 7547 962 7138 14307;14308 11495;11496 11496 2 9606 Homo sapiens -0.010853347496322385 ESGRPIKPPR Unmodified 1135.6462 0.64619053 730 P25440-2;P25440;P25440-3;A0A0G2JK44;A0A140T9E9;H0Y6K2;A0A024RCR5;X5CF57;A0A1U9X7A8;P25440-4;A0A1U9X7B8;A0A1U9X7B4;A0A1U9X7B3;A0A140T9V2;A0A0G2JHL0;A0A140T9F7;U3KQA6;E9PIQ3;U3KPW0;H0YDJ7 BRD2 Bromodomain-containing protein 2 yes no 0 0 2 2.5 0.5 1 1 29.819 29.9 4 0.0028352 5657 20230619_1881_Aki_TMTPro18x_K_F2 88.681 60.168 95444 58403 69970 71525 65241 83293 75412 73213 100680 94179 109680 129540 124130 100060 102910 119990 137790 131230 87920 53647 73141 71314 68618 83080 76240 76076 101470 95150 112850 128850 125220 105250 107030 120840 131450 124550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 37638000 7548 730 7139 14309;14310 11497;11498;11499 11497 3 9606 Homo sapiens 0.08379327865782216 ESGSDAWK Unmodified 878.37701 0.37701112 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GW82;A0A1B0GUA1;A0A1B0GTJ4;A0A1B0GV49 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 3.5 0.5 1 1 41.824 41.877 2 0.0036592 10410 20230619_1882_Aki_TMTPro18x_K_F3 118.74 75.922 236540 136320 320300 283000 421310 463580 328470 364860 376360 252690 416060 419420 355000 328530 403220 135580 462740 382090 218960 126120 319680 275840 426950 452460 338280 376410 381700 266690 422460 414790 366720 331830 410890 154080 441620 360590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157890000 7549 1415 7140 14311;14312 11500;11501 11500 2 9606 Homo sapiens -0.06704230821389956 ESGVDIAAGNMLVK Unmodified 1402.7126 0.71261511 3488 Q3B7A7;Q59HH3;P22102;O14660 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 5.67 0.471 1 2 56.847 56.915 2;3 2.4787E-05 16636 20230619_1885_Aki_TMTPro18x_K_F5 110.92 85.205 83726 72365 86857 81335 72287 87862 88344 85111 103630 94765 100290 93228 99666 84443 85941 108830 98475 100600 77471 66320 87729 81535 76738 88292 88640 87407 104540 95233 102960 94471 101100 88677 88454 108440 94114 95632 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112560000 7550 3488 7141 14313;14314;14315 11502;11503 11502 2 9606 Homo sapiens 0.02736730854826419 ESGVDIAAGNMLVK Oxidation (M) 1418.7075 0.70752973 3488 Q3B7A7;Q59HH3;P22102;O14660 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 1 0 5 0 1 51.319 51.394 3 0.0004909 14349 20230619_1885_Aki_TMTPro18x_K_F5 93.766 73.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7551 3488 7141 14316 11504 11504 2147 1 9606 Homo sapiens 0.014924269922175881 ESIEIINK Unmodified 944.51786 0.51786169 1194 A0A140VJQ4;P04181;P04181-2;Q59HE2 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes no 0 0 0 5 0 1 50.114 50.19 3 0.037055 13831 20230619_1885_Aki_TMTPro18x_K_F5 60.478 29.174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7552 1194 7142 14317 11505 11505 1 9606 Homo sapiens 0.04338347832049294 ESIESEIRR Unmodified 1117.5728 0.57275081 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;Q96IF9;Q0IIN5;Q9NTC4 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 1 2.5 0.5 1 1 36.84 36.897 3 1.1355E-06 8342 20230619_1882_Aki_TMTPro18x_K_F3 187.22 142.82 408120 290880 326140 375670 469150 501250 427710 419520 699700 495310 546930 451680 482280 419580 494160 486770 570660 458050 376450 267150 340550 373910 475510 495470 441730 436130 690610 495840 564790 459730 495060 437390 506420 486560 544480 435780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 812160000 7553 3656 7143 14318;14319 11506 11506 1 9606 Homo sapiens 0.01866734632653788 ESIGSELGNSFASNIR Unmodified 1679.8115 0.81147753 4082 Q5VZL5-2;Q5VZL5-4;Q5VZL5 ZMYM4 Zinc finger MYM-type protein 4 yes no 0 0 0 6 0 1 56.052 56.126 3 0.011189 16508 20230619_1886_Aki_TMTPro18x_K_F6 62.525 49.758 42349 32223 36916 40816 35260 43857 42467 45495 47431 39306 35197 31424 45504 30295 36662 48890 40289 41304 39101 29580 37958 40554 37004 44136 42559 46186 47547 39826 37112 32272 45646 32308 37705 48364 38520 39308 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14027000 7554 4082 7144 14320 11507 11507 1 9606 Homo sapiens -0.001235746465226839 ESILGGVLK Unmodified 914.54368 0.54368251 4383 Q96N67;Q96N67-6;Q96N67-2;Q96N67-5;Q96N67-3;Q96N67-4;A0A2X0SSK2;B3KRG0;A0A1B0GWE0;B4DSH0 DOCK7 Dedicator of cytokinesis protein 7 yes no 0 0 0 6.5 0.5 2 2 49.291 49.372 2;3 0.0021632 13282 20230619_1887_Aki_TMTPro18x_K_F7 109.01 50.095 180630 141130 171810 165040 159910 203830 188800 185300 232160 213300 227910 202120 233260 190340 223560 233880 239930 254730 166910 129440 175090 165270 168120 202690 190050 191300 233820 213810 234100 205430 237390 199140 228470 235460 229500 241670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 439930000 7555 4383 7145 14321;14322;14323;14324 11508;11509 11509 2 9606 Homo sapiens 0.08299242074349422 ESIVDVEGVVR Unmodified 1200.635 0.63501672 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53R85;C9J7S3;C9JLC1;C9JQM9 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 3 0.816 1 1 1 52.533 52.571 2 0.00012539 15274 20230619_1882_Aki_TMTPro18x_K_F3 135.72 99.017 848410 727120 760640 856740 724260 855260 873490 847000 974820 1048600 973570 946790 1156200 892070 906170 1206700 1009800 1097500 784060 666700 780120 854630 759880 864810 875260 871360 988050 1045800 1006600 964300 1161700 939040 933280 1200500 965740 1043200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 889650000 7556 1207 7146 14325;14326;14327 11510;11511 11511 2 9606 Homo sapiens 0.04272460980973847 ESKDPADETEAD Unmodified 1305.5208 0.5208344 2660 B5BU83;P16949;Q96CE4 STMN1 Stathmin yes no 0 0 1 1 0 1 37.544 37.544 3 0.00046132 9003 20230619_1880_Aki_TMTPro18x_K_F1 82.362 77.949 169120 106400 219070 249620 340490 391040 259870 272820 264920 226280 348610 422960 281660 334050 382060 145840 362400 308580 156540 98613 220410 241710 341850 381620 266970 285660 272700 237270 351530 416820 294900 337200 384290 159590 346560 291570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 877870000 7557 2660 7147 14328 11512 11512 1 9606 Homo sapiens -0.11970518362409166 ESKEEETSIDVAGKPNEVTK Unmodified 2189.0699 0.069936644 90 B4DKS0;A0A024R0H1;P53985;B4E106 SLC16A1 Monocarboxylate transporter 1 yes no 0 0 2 5 0 1 45.103 45.181 4 5.457E-05 11697 20230619_1885_Aki_TMTPro18x_K_F5 90.399 76.073 226980 189360 227100 253180 276420 278140 263090 253370 283540 296610 308700 286700 315730 245400 287880 315360 266200 245380 209910 173870 231550 250680 282630 278850 266700 261740 288860 297130 315700 290200 320460 258190 292180 311840 254760 233890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285470000 7558 90 7148 14329 11513 11513 1 9606 Homo sapiens 0.02296447294384052 ESKEETPEVTK Unmodified 1275.6194 0.61942623 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 1 3 1 1 1 38.83 38.897 3 0.001934 9291 20230619_1881_Aki_TMTPro18x_K_F2 86.699 63.094 160100 80447 212730 207100 306890 323240 238090 273730 210790 182820 339790 343530 214060 244220 364570 89713 265070 193390 148080 74788 213080 199980 309100 316640 243450 280530 221070 194460 337350 337790 229810 246730 361020 99463 254080 182850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123950000 7559 630 7149 14330;14331 11514;11515 11514 2 9606 Homo sapiens -0.007358703267072997 ESLAEEHEGLVGEGQR Unmodified 1738.8122 0.81220581 2834 D3DWL9;Q10570;B4DEF4 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes no 0 0 0 1.5 0.5 1 1 39.376 39.409 3 1.3714000000000001E-77 9813 20230619_1880_Aki_TMTPro18x_K_F1 284.74 258.33 50954 40107 47445 54474 48067 57022 54486 47081 53055 52092 66463 58044 60394 51808 54097 61465 60399 72188 47078 36840 48546 53839 50075 57223 54524 48961 54636 52571 67234 58494 61529 54173 55515 62185 57810 68408 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136760000 7560 2834 7150 14332;14333 11516 11516 1 9606 Homo sapiens -0.027647799974829468 ESLAESAAAYTK Unmodified 1239.5983 0.59829686 2698 Q9H6Z4;Q9H6Z4-2;Q9H6Z4-3;Q53GE1;B7Z7F3;Q308M8;B7Z5P4;A0A384ME25;K7ESQ0 RANBP3 Ran-binding protein 3 yes no 0 0 0 5.5 0.5 1 1 50.14 50.217 3 0.00013688 13848 20230619_1885_Aki_TMTPro18x_K_F5 106.26 81.514 78378 56650 66341 77570 74018 89060 89339 80039 111450 97672 103870 104040 106090 94454 90827 117300 112930 111650 72329 52058 68598 76734 76803 88945 89822 82890 111940 98013 107010 105030 107540 98925 93994 117120 107830 106110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197140000 7561 2698 7151 14334;14335 11517 11517 1 9606 Homo sapiens -0.01191835635586358 ESLCDSPHQNLSRPLLENK Unmodified 2236.0906 0.090629281 3231 O15042-2;O15042;E7ET15;E7EW00;H0Y8D9;B4DK81;C9JDJ7;C9J5L1;U3KPT1 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 0 0 1 7 0 1 43.865 43.947 4 2.7920999999999996E-19 10885 20230619_1887_Aki_TMTPro18x_K_F7 182.15 160.05 40490 37166 42407 48427 40791 49006 46710 46786 39414 48538 41031 45545 46438 31284 37475 50196 48980 54661 37483 34104 42938 47976 42654 49447 46547 48005 40697 48830 42291 45875 46753 33793 38972 50338 46792 51850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31606000 7562 3231 7152 14336 11518 11518 1 9606 Homo sapiens 0.022027591930964263 ESLEALLQR Unmodified 1057.5768 0.57677356 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 0 4.5 0.5 1 1 56.804 56.837 2 5.4443E-05 16596 20230619_1885_Aki_TMTPro18x_K_F5 163.04 75.713 164340 150050 143070 164900 160210 200380 180650 179970 256100 174990 181990 171710 180870 166650 187530 180750 174990 203520 151900 137460 147530 165790 165970 199450 183190 185120 253390 177240 190110 174340 185050 172820 189850 182720 167750 192960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 367300000 7563 3337 7153 14337;14338 11519 11519 1 9606 Homo sapiens 0.05028824126384279 ESLIDGIK Unmodified 873.48075 0.48074791 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 0 5 0 1 56.68 56.742 2 0.010671 16553 20230619_1885_Aki_TMTPro18x_K_F5 93.162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7564 1439 7154 14339 11520 11520 1 9606 Homo sapiens 0.038946762862906326 ESLIDGIKR Unmodified 1029.5819 0.58185894 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 1 8 0 2 48.435 48.495 3 0.00069886 13473 20230619_1888_Aki_TMTPro18x_K_F8 109.29 0 527580 529870 557570 504740 602420 607320 601800 553550 637320 682650 677920 508180 633240 447970 719310 535810 466220 429770 488760 484690 564190 513660 621580 605670 608000 572600 649240 677640 690800 522030 650750 469160 714950 531810 448270 409460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 305950000 7565 1439 7155 14340;14341 11521;11522 11522 2 9606 Homo sapiens 0.06825127989009161 ESLLAEQR Unmodified 944.49271 0.49270958 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 2.5 0.5 1 1 40.742 40.808 2 0.014429 10165 20230619_1881_Aki_TMTPro18x_K_F2 93.992 60.871 278690 221750 254320 268570 314800 360820 313250 296100 440390 333650 376440 352030 354320 306620 328300 385740 390120 361130 257460 203430 261400 268550 322550 356350 319710 307960 438510 336080 388040 355190 361220 321900 338020 384830 372470 343370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 293530000 7566 3440 7156 14342;14343 11523 11523 1 9606 Homo sapiens 0.018242930294718462 ESLLDLSK Unmodified 903.49131 0.49131259 4819 yes yes 0 0 0 5.29 0.7 1 3 3 55.432 55.494 2;3 0.0018049 16048 20230619_1885_Aki_TMTPro18x_K_F5 136.8 0 + 811790 710070 680610 788640 749680 887130 815710 799230 1202200 920760 908760 817290 919840 755300 849890 999940 994200 951940 749960 650660 704080 791340 776540 887670 830180 825810 1190300 921740 945910 832800 935250 794300 874240 997770 949550 904830 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 868760000 7567 4819 7157 14344;14345;14346;14347;14348;14349;14350 11524;11525 11524 2 9606 Homo sapiens 0.03570658940714111 ESLPALR Unmodified 784.4443 0.44430282 3619 P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96;K7EMQ3;B4DJ53 DNM2 Dynamin-2 yes no 0 0 0 5 0 1 40.957 41.045 2 0.076151 9956 20230619_1885_Aki_TMTPro18x_K_F5 74.415 2.2768 300050 258530 253810 249770 181610 223990 201690 197480 267160 266660 278340 273580 289570 294410 255540 369130 385020 365520 277180 236640 260510 252840 195340 228010 204410 205560 268930 266130 285470 278340 294070 306740 268210 369180 367000 347280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100730000 7568 3619 7158 14351 11526 11526 1 9606 Homo sapiens 0.04345844180227232 ESLPELSTAQQNK Unmodified 1443.7205 0.72053726 282 A0A024R471;Q9H9Q2;Q53GQ2;J3KQ34;J3KQ41;Q9H9Q2-3 COPS7B COP9 signalosome complex subunit 7b yes no 0 0 0 5 0 1 48.463 48.54 3 0.00024183 13117 20230619_1885_Aki_TMTPro18x_K_F5 95.417 57.125 47983 42798 46131 44735 50046 53155 59911 49134 59193 50533 55880 52697 57733 45653 56908 59328 51535 51918 44379 39194 47073 45157 51907 53045 59782 50539 60180 51082 57564 53193 58792 48050 57600 58983 49363 49389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29520000 7569 282 7159 14352 11527 11527 1 9606 Homo sapiens 0.01642581375995178 ESLSGQAVR Unmodified 945.48796 0.48795855 1449 A0A384NPX8;A0A384MTZ1;P47985;P0C7P4 UQCRFS1;UQCRFS1P1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11;Putative cytochrome b-c1 complex subunit Rieske-like protein 1 yes no 0 0 0 3.5 0.5 1 1 34.13 34.19 2 5.5043E-08 7194 20230619_1883_Aki_TMTPro18x_K_F4 196.95 157.73 106560 61976 136410 143680 213570 230410 178160 199560 242210 110490 174970 195560 156590 156950 163920 70629 181500 182780 98580 57450 137310 139330 214760 225500 183620 203530 239930 119270 182020 193190 160940 158610 166990 78978 173500 172410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 145950000 7570 1449 7160 14353;14354 11528;11529 11529 2 9606 Homo sapiens 0.01303408886701618 ESLVVNYEDLAAR Unmodified 1477.7413 0.7412727 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 4.25 0.829 1 1 2 56.906 56.939 2 2.5839E-16 17043 20230619_1883_Aki_TMTPro18x_K_F4 261.22 177.22 284630 230660 250740 278240 217430 288330 260560 254630 303280 356490 334960 322430 362340 314760 310410 379920 330030 345660 262920 211590 257230 277200 230160 289960 261640 265220 308110 353770 343260 328630 366490 328340 318030 378640 315690 328610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 412220000 7571 2702 7161 14355;14356;14357;14358 11530;11531;11532 11531 3 9606 Homo sapiens 0.021511717556677468 ESLWPFLIDK Unmodified 1246.6598 0.6597749 1191 A0A8Q3WK80;A0A8Q3WK74;Q9NZL9-4;Q9NZL9-2;Q9NZL9;A0A140VJP2;A8K7A4;H7C0X7;B7Z1X8;A0A8Q3WLC0;A0A8Q3SIE5;A0A8Q3WK93 MAT2B Methionine adenosyltransferase 2 subunit beta yes no 0 0 0 1 0 1 64.551 64.551 3 0.00049064 20359 20230619_1880_Aki_TMTPro18x_K_F1 96.015 63.517 14884 13201 14349 15567 17785 23842 15604 19334 25988 24153 21563 25052 26610 23362 17221 29978 31457 33768 13766 12103 14683 15631 18200 23366 16185 20172 25725 24191 22560 25330 26577 24509 18533 30187 29976 32024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20332000 7572 1191 7162 14359 11533 11533 1 9606 Homo sapiens 0.046311408543715515 ESMAGNKPANAVLHK Oxidation (M) 1581.7933 0.79332505 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8Y7I0;A0A2R8Y7M9;A0A2R8Y795 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 1 1 8 0 1 38.558 38.544 4 3.2003E-07 8904 20230619_1888_Aki_TMTPro18x_K_F8 135.5 118.42 82064 58790 78163 83438 101790 105320 98153 101070 122290 96224 107020 97308 96284 83990 100200 89704 102320 88445 75793 54048 80110 82500 103750 104730 99903 103380 122520 97590 110000 98307 98813 87369 101870 90035 97778 84070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69379000 7573 1005 7163 14360 11534 11534 569 1 9606 Homo sapiens 0.02570011897751101 ESMATGSIPITVR Unmodified 1360.7021 0.70205043 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;Q9BWF4 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 7.5 0.5 1 1 50.122 50.201 2 2.5199E-10 13597 20230619_1888_Aki_TMTPro18x_K_F8 174.77 152.78 223570 172180 175740 188670 155650 210100 187110 189620 219490 255970 253450 214540 271540 200070 210390 250460 244690 244910 206280 157830 182310 189520 164580 210340 187920 196860 223310 253840 258890 219290 273430 209710 217130 250450 233790 232670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 243920000 7574 2702 7164 14361;14362 11535;11536 11536 2 9606 Homo sapiens 0.0361274820043036 ESMIQLF Unmodified 866.42079 0.42079019 351 B4E1L0;A0A024R5Q7;P30520;G3V5D8;G3V232;B3KTV4;Q8N142;Q8N142-2 ADSS;ADSSL1 Adenylosuccinate synthetase isozyme 2;Adenylosuccinate synthetase isozyme 1 yes no 0 0 0 5.5 0.5 1 1 65.044 65.088 2 0.044438 20195 20230619_1885_Aki_TMTPro18x_K_F5 88.734 71.808 16441 14598 15436 14860 16441 28533 18659 16431 32475 9798.3 9636.9 9537.1 11874 7075.5 11276 11537 8814.1 10354 15203 13366 15790 15161 17171 27512 19083 17444 31314 10312 11057 9621.6 12007 7628.3 11343 11454 8467.7 9840.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49516000 7575 351 7165 14363;14364 11537 11537 1 9606 Homo sapiens -0.01776337648595927 ESMQMQVEAER Unmodified 1336.5751 0.57513535 4673 Q9UJZ1;A0A087WYB4;Q6ZNW0 STOML2 Stomatin-like protein 2, mitochondrial yes no 0 0 0 2 0 1 41.066 41.143 2 0.00012451 10338 20230619_1881_Aki_TMTPro18x_K_F2 135.8 108.17 35018 30283 37493 37217 38020 44948 39255 39087 53435 44444 42850 44055 49308 40588 40140 55042 51258 55185 32410 27778 37890 37118 39524 44724 39946 40476 53203 44648 44742 44641 49693 42757 41676 55037 48963 52399 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49571000 7576 4673 7166 14365 11538 11538 1 9606 Homo sapiens -0.07968921016163222 ESNCYDPER Unmodified 1168.4455 0.44550139 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 0 1 33.083 33.083 2 0.00010024 7152 20230619_1880_Aki_TMTPro18x_K_F1 155.58 142.96 49702 25279 52756 56190 74887 70074 59077 68376 79141 55580 72920 75593 82634 61867 57688 42947 85299 77161 45873 23432 53670 54329 75537 69734 61121 69601 79175 57501 75512 75319 82805 63353 60528 45433 81290 72955 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 380620000 7577 826 7167 14366 11539 11539 1 9606 Homo sapiens -0.1319835430385865 ESNSLEISLIK Unmodified 1231.666 0.66598249 4394 Q96RS6;Q96RS6-3;Q96RS6-2;A0A7I2V457 NUDCD1 NudC domain-containing protein 1 yes no 0 0 0 5.5 0.5 1 1 57.851 57.915 3 0.0011591 17216 20230619_1886_Aki_TMTPro18x_K_F6 89.301 56.803 105350 88099 111780 119910 86747 96845 113190 120740 131720 122310 108560 133850 144990 118710 116550 165980 148680 155550 97475 80905 112690 118190 92797 100210 113220 121760 132250 123860 114230 134850 145490 125450 121060 165290 141990 147820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231200000 7578 4394 7168 14367;14368 11540 11540 1 9606 Homo sapiens 0.05941614295238651 ESNTDQGFFK Unmodified 1171.5146 0.51456723 4549 Q9HC52 CBX8 Chromobox protein homolog 8 yes yes 0 0 0 4 0 1 48.458 48.496 3 0.0016717 13301 20230619_1883_Aki_TMTPro18x_K_F4 72.096 55.871 73978 65513 75180 79676 77946 93737 83685 76891 109660 88599 90770 91538 95784 81656 89127 112410 95259 105010 68449 60081 76350 79474 80997 93322 84823 80055 109440 89076 94241 92505 97300 86170 91221 111980 91152 99777 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28991000 7579 4549 7169 14369 11541 11541 1 9606 Homo sapiens -0.06432947012626755 ESNVQEVR Unmodified 959.46722 0.46722311 1200 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;P67775;B3KUN1;A0A8V8TQA1;Q6I9T8;A0A8V8TRB3;P67775-2;E7ESG8;B7Z2C5 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes no 0 0 0 1.5 0.5 1 1 30.508 30.54 2 0.00085807 6187 20230619_1880_Aki_TMTPro18x_K_F1 154.49 115.7 68466 25668 87734 87590 130170 130980 93440 117820 98584 67402 118080 138240 96111 100370 117020 36108 128580 127380 63241 24072 88132 83800 130710 128730 96603 119860 100770 72984 119450 135670 99897 101390 118800 42706 122900 120020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 84999000 7580 1200 7170 14370;14371 11542;11543;11544 11542 3 9606 Homo sapiens -0.014131814929442044 ESPELLELIEDLK Unmodified 1526.808 0.80795528 4579 Q9NQZ2 UTP3 Something about silencing protein 10 yes yes 0 0 0 4 0 1 66.126 66.137 3 0.014501 20898 20230619_1883_Aki_TMTPro18x_K_F4 62.924 43.866 2656.9 2888.2 2483.5 2465.2 1410.8 3785.9 4089.9 2424 3848.2 2895.6 3051.7 3396.5 4412.8 1510.2 3507 2595.9 3470.4 4085.4 2460.5 2639.2 2525.7 2543.2 1638.1 3693.3 3954.9 2587.7 3897.4 2918.4 3230.8 3358.5 4401.9 1690.2 3574.8 2676.2 3325.1 3862.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1480600 7581 4579 7171 14372 11545 11545 1 9606 Homo sapiens 0.06562362526915422 ESPESEGPIYEGLIL Unmodified 1631.793 0.7930335 4389 Q96QK1;Q53FR4 VPS35 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 1.5 0.5 1 1 65.397 65.401 2 2.3021E-07 20960 20230619_1881_Aki_TMTPro18x_K_F2 135.71 124.35 35729 28746 33258 37280 30469 39800 39438 36256 35539 44548 48114 47940 45962 38254 46046 51741 46947 56858 33015 26389 33984 36971 32146 39956 39133 37521 36953 44658 48689 48196 46969 40505 46908 52042 44978 53913 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 243540000 7582 4389 7172 14373;14374 11546;11547 11547 2 9606 Homo sapiens 0.002408706589221765 ESPNPPNPSGQCPICR Unmodified 1808.7934 0.7934014 4047 Q5QPA5;Q9NVS2-3;Q9NVS2;Q9NVS2-2 MRPS18A 28S ribosomal protein S18a, mitochondrial yes no 0 0 0 5 0 1 39.147 39.239 2 0.00054967 9211 20230619_1885_Aki_TMTPro18x_K_F5 89.548 83.445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7583 4047 7173 14375 11548 11548 1 9606 Homo sapiens -0.07864356164509445 ESPQDSAITR Unmodified 1102.5255 0.52546627 4729 Q9Y3P9;Q9Y3P9-2 RABGAP1 Rab GTPase-activating protein 1 yes no 0 0 0 2 0 1 33.501 33.559 2 0.00040443 7075 20230619_1881_Aki_TMTPro18x_K_F2 127.37 103.52 19443 11990 24555 26713 34647 33372 27375 28203 31243 25893 36753 39971 41076 32508 31238 18195 46435 47607 17990 11103 24676 25820 34945 33106 28153 29113 31813 26731 37649 39643 41309 33074 32698 20202 44290 44901 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38517000 7584 4729 7174 14376 11549 11549 1 9606 Homo sapiens -0.02169544638354637 ESPTIVQGR Unmodified 985.51926 0.51925868 1343 A0A2R8Y6I1;A0A2R8Y3N3;B2R7G6;A0A2R8Y5P7;P49590-2;P49590;D6RJE6;B4DSY5;A0A2R8Y4X6;A0A2R8Y5E8 HARS2 Probable histidine--tRNA ligase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 35.887 35.939 2 0.0022826 7917 20230619_1883_Aki_TMTPro18x_K_F4 107.9 55.493 25138 21239 26589 27710 39261 36326 36575 40078 47840 36460 42949 43484 42699 37230 39123 36794 53372 43834 23260 19495 27083 27569 39662 36175 37374 40564 47866 37270 44284 43609 43441 38589 40613 37388 50862 41594 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210350000 7585 1343 7175 14377;14378 11550 11550 1 9606 Homo sapiens 0.02591981920818398 ESPTMTEFLCK Unmodified 1341.5945 0.59447381 377 Q6NUM7;A0A024R640;Q9NUQ2 AGPAT5 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon yes no 0 0 0 6 0 1 57.53 57.599 3 0.050449 17115 20230619_1886_Aki_TMTPro18x_K_F6 55.046 42.065 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7586 377 7176 14379 11551 11551 1 9606 Homo sapiens -0.06265964725275808 ESQDTSFTTLVER Unmodified 1511.7104 0.71036651 3806 Q06210-2;Q06210;A0A6I8PRN4;A0A6I8PTT9 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 0 2.5 0.5 1 1 50.488 50.551 2 2.3431E-27 14701 20230619_1881_Aki_TMTPro18x_K_F2 278.35 258.06 88427 65902 77464 86656 61837 80642 78019 81374 105020 106800 104530 113060 140990 108210 97973 148790 126320 151030 81636 60526 79431 85719 66076 81986 78594 83774 105500 106780 108870 114380 140640 113990 102240 148820 120760 143330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108000000 7587 3806 7177 14380;14381 11552;11553 11552 2 9606 Homo sapiens -0.025020263492706363 ESQLFDPSDLQDTSNR Unmodified 1850.8282 0.82824981 2848 Q9UPQ0-10;Q9UPQ0;D6RD46;Q9UPQ0-2;Q9UPQ0-4 LIMCH1 LIM and calponin homology domains-containing protein 1 yes no 0 0 0 2 0.816 1 1 1 54.367 54.379 3 4.8667E-08 16312 20230619_1881_Aki_TMTPro18x_K_F2 124.15 108.76 50263 49092 56174 48284 52091 54921 56563 54051 66157 35620 43091 38379 43572 30788 49702 42876 42765 40022 46578 44922 56458 48972 54522 55046 57067 54798 65823 37123 45307 38633 44706 32670 50010 42755 40965 38054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39287000 7588 2848 7178 14382;14383;14384 11554;11555 11554 2 9606 Homo sapiens -0.06313118551247499 ESQLLLNVVSQLAK Unmodified 1540.8825 0.88245763 965 A0A0A0MTQ0;O15091-3;O15091-4;O15091-2;O15091 KIAA0391 Mitochondrial ribonuclease P protein 3 yes no 0 0 0 3 0 1 65.269 65.303 3 0.005806 20651 20230619_1882_Aki_TMTPro18x_K_F3 68.972 49.133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7589 965 7179 14385 11556 11556 1 9606 Homo sapiens 0.13365170128940917 ESQSEREEFESEFK Unmodified 1759.7537 0.75368788 938 Q8IWQ7;B9EGA7;A0A0A0MRJ0;A0A0A0MRJ1;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-2;Q5VT25-6;Q5HYB0;H0Y5V1 CDC42BPA;DKFZp686P1738 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha yes no 0 0 1 1.5 0.5 1 1 46.236 46.276 3 1.5388E-06 12857 20230619_1880_Aki_TMTPro18x_K_F1 124.09 103.43 27869 21013 27093 28117 30311 36164 32263 32603 36426 35830 35362 40277 38665 31992 38939 45047 39319 45520 25751 19302 27646 27911 31307 35863 32547 33633 36844 36172 36519 40404 39365 33966 39649 45063 37660 43208 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72840000 7590 938 7180 14386;14387 11557 11557 1 9606 Homo sapiens -0.09579881362628839 ESQSPDTTIQR Unmodified 1260.5946 0.59460847 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;Q92973-3;A0A7P0T944;A0A7P0T9C0;B4DSC0;E7EW37 TNPO1 Transportin-1 yes no 0 0 0 1.5 0.5 1 1 32.729 32.759 2 7.4511E-23 6777 20230619_1881_Aki_TMTPro18x_K_F2 250.16 201.36 80872 43047 102130 92743 124420 145090 83661 100030 98042 82237 132930 148450 120770 122150 124150 59196 154960 145480 74780 39870 102240 90148 126420 141580 87302 104800 100370 86131 134330 146650 123940 123530 127510 65562 147900 137300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 176900000 7591 629 7181 14388;14389 11558;11559 11559 2 9606 Homo sapiens -0.025265054094461448 ESQSVEEALKK Unmodified 1246.6405 0.64049603 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 1 4.5 0.5 1 1 45.372 45.433 3 0.00011043 11806 20230619_1885_Aki_TMTPro18x_K_F5 120.23 107.03 119320 126390 135960 110300 162530 138620 151120 132020 119080 137440 148350 85748 125490 72481 176120 77171 73786 55186 110660 115520 136920 113260 165930 138100 152070 135460 124390 136980 149540 89062 130810 75630 172000 76593 71458 52717 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201220000 7592 1182 7182 14390;14391 11560 11560 1 9606 Homo sapiens 0.02704139772799863 ESQTQDNITVR Unmodified 1289.6212 0.62115757 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A8A5YP40;A0A994J773;A0A8A5YP91;A0A8A5YQV3 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 2 0 1 34.786 34.843 2 1.6211E-16 7598 20230619_1881_Aki_TMTPro18x_K_F2 220.82 191.15 48560 30382 55209 63165 73474 85912 69033 71438 89548 66867 85107 81984 88419 77694 67125 49336 97979 88927 44887 28099 55865 61308 74804 84734 70487 73846 89803 68351 87618 82352 89163 78834 70222 52321 93384 84077 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100360000 7593 462 7183 14392 11561 11561 1 9606 Homo sapiens -0.012068165181290169 ESRATDDLR Unmodified 1061.5102 0.51015055 4763 yes no 0 0 1 1.5 0.5 2 2 28.168 28.205 3 0.02357 5002 20230619_1881_Aki_TMTPro18x_K_F2 65.347 17.523 + 61013 28390 81030 82095 128120 118970 100380 107140 92520 71096 117790 126090 94288 90563 108550 36463 124260 108660 56418 26473 81340 78859 128330 117160 102620 109290 95590 75453 118730 124170 97714 91753 110580 41807 118630 102490 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 60300000 7594 4763 7184 14393;14394;14395;14396 11562;11563 11563 2 9606 Homo sapiens -0.018144114355436614 ESRPSEEREWDR Unmodified 1574.7073 0.70734681 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 2 1.5 0.5 1 1 29.329 29.365 4 1.1911E-17 5759 20230619_1880_Aki_TMTPro18x_K_F1 208.27 168.49 51169 37422 43198 52455 48727 63976 56489 53722 81059 71308 66083 65589 75994 57749 58089 73700 77465 75584 47222 34396 44702 51853 50529 63544 57230 56059 80585 70993 68908 66571 76373 60718 60536 73861 73918 71777 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100840000 7595 3152 7185 14397;14398 11564 11564 1 9606 Homo sapiens -0.057018566833903606 ESRQEEMNSQQEEEEMETDAR Oxidation (M) 2600.0239 0.023867442 3850 Q13435;E9PPJ0;E9PJ04;H0YCG1 SF3B2 Splicing factor 3B subunit 2 yes no 0 1 1 1 0 1 32.389 32.389 3 5.604E-08 6936 20230619_1880_Aki_TMTPro18x_K_F1 111.57 111.04 15886 18851 16060 14723 21356 16755 17546 17661 19776 16005 17491 16052 18731 13602 14974 17793 18817 14917 14732 17212 16361 15262 21608 16848 17983 17933 19927 16270 18094 16223 18888 14339 15518 17645 17940 14213 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30727000 7596 3850 7186 14399 11565;11566 11565 2524;2525 2 9606 Homo sapiens -0.21214353732284508 ESRQEEMNSQQEEEEMETDAR Unmodified 2584.029 0.02895282 3850 Q13435;E9PPJ0;E9PJ04;H0YCG1 SF3B2 Splicing factor 3B subunit 2 yes no 0 0 1 1 0 1 38.235 38.235 3 5.3085E-68 9307 20230619_1880_Aki_TMTPro18x_K_F1 315.18 312.13 26446 28526 25586 23137 23969 23282 29633 29142 23637 29119 29194 24034 28594 19244 27116 36584 30735 26932 24496 26058 26022 23858 25131 23704 29377 29360 24664 29248 29637 24512 29100 20939 27852 35912 29346 25696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113550000 7597 3850 7186 14400 11567 11567 1 9606 Homo sapiens -0.1997004986965294 ESRYEEEEEQSR Unmodified 1569.6543 0.65430819 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 1 1 0 1 29.467 29.467 3 4.121E-18 5748 20230619_1880_Aki_TMTPro18x_K_F1 201.48 173.61 35234 29847 35828 36405 46336 45696 46129 44659 44220 51813 58596 55528 55897 47911 52588 50245 65568 53253 32591 27377 36506 36354 47231 45495 46470 45878 45760 52074 59308 55942 56984 49798 54229 50639 62525 50593 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 741430000 7598 4746 7187 14401 11568 11568 1 9606 Homo sapiens -0.10773279256704882 ESSETPDQFMTADETR Oxidation (M) 1858.7527 0.7527016 1496 P16070;P16070-11;H0YD13;B4DN59;A8K309;A0A385KNS5;P16070-7;P16070-12;P16070-14;P16070-13;P16070-8;P16070-10;P16070-17;P16070-3;P16070-16;P16070-6;P16070-4;P16070-18;P16070-5;H0Y2P0;H0YE40;B4E2X0 CD44 CD44 antigen yes no 0 1 0 1 0 1 40.877 40.877 3 0.00010202 10480 20230619_1880_Aki_TMTPro18x_K_F1 92.455 87.176 52751 45533 47156 50044 64581 66155 49900 54682 69565 71445 81568 79903 77569 70822 70060 90674 83842 75666 48751 41721 48632 50386 65323 65443 51798 57080 70256 71578 82921 80460 78978 74347 72248 89908 80029 72057 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84034000 7599 1496 7188 14402 11569 11569 1001 1 9606 Homo sapiens -0.1423246379383727 ESSETPDQFMTADETR Unmodified 1842.7578 0.75778698 1496 P16070;P16070-11;H0YD13;B4DN59;A8K309;A0A385KNS5;P16070-7;P16070-12;P16070-14;P16070-13;P16070-8;P16070-10;P16070-17;P16070-3;P16070-16;P16070-6;P16070-4;P16070-18;P16070-5;H0Y2P0;H0YE40;B4E2X0 CD44 CD44 antigen yes no 0 0 0 1 0 1 47.414 47.414 3 3.5312E-19 13273 20230619_1880_Aki_TMTPro18x_K_F1 196.95 165.28 34321 28378 33725 30836 35899 39740 28895 28620 38621 43810 43392 45435 51259 37010 43419 49543 51928 49001 31734 26004 34314 31065 36952 39271 29864 30412 39035 43514 44646 45757 51654 39147 44789 49535 49581 46558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179060000 7600 1496 7188 14403 11570 11570 1 9606 Homo sapiens -0.12988159931228438 ESSLTEPVIVGLLK Unmodified 1483.8498 0.84976052 743 B4DSD7;E9PFR3;A0A024RD11;Q14738;A8K6Y2;Q14738-2;Q14738-3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes no 0 0 0 7.5 0.5 1 1 63.468 63.495 3 0.0035609 19283 20230619_1888_Aki_TMTPro18x_K_F8 76.728 57.983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7601 743 7189 14404;14405 11571;11572 11572 2 9606 Homo sapiens 0.12718963006091144 ESSPLYSPTFSDSTSAVK Unmodified 1901.8895 0.88945308 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 6 0 1 54.609 54.686 3 2.3942E-10 15887 20230619_1886_Aki_TMTPro18x_K_F6 143.28 125.58 248810 181990 217250 249450 230900 268950 227010 249850 253610 315660 311030 451140 276550 344070 422220 351410 392350 566820 229670 167230 223700 246540 238870 269970 230110 258360 259460 319420 316190 447580 291000 358590 424800 365230 376900 535440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 732570000 7602 630 7190 14406 11573 11573 1 9606 Homo sapiens -0.025416065718218306 ESSSEQYVPDVFYK Unmodified 1676.757 0.75698235 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;B4DG89 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 0 4 0.816 1 1 1 58.694 58.723 3 5.5009E-07 17797 20230619_1883_Aki_TMTPro18x_K_F4 104.41 87.53 69370 54821 60956 65244 61577 76306 74729 70682 94521 73240 69856 69228 81564 59022 75747 77128 73727 76679 64067 50286 62673 65183 64379 76175 75162 72670 94140 73809 73346 70126 82532 62232 77023 77187 70581 72824 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 176190000 7603 534 7191 14407;14408;14409 11574;11575 11574 2 9606 Homo sapiens -0.054325865179635 ESSTVFELK Unmodified 1038.5233 0.523341 1399 A0A8I5KUS5;A0A384MDL3;Q15370;Q15370-2;B8ZZU8;I3L0M9;A0A0B4J296 TCEB2 Transcription elongation factor B polypeptide 2 yes no 0 0 0 4 0 1 53.001 53.021 3 2.792E-05 15353 20230619_1883_Aki_TMTPro18x_K_F4 130.31 88.68 196070 154580 161160 196840 169870 202710 186440 190910 247380 250550 249040 230480 259940 223820 213630 282410 261770 267270 180990 141890 166970 195330 176520 204230 188920 197440 248710 249470 255720 234770 262810 234200 221090 281800 250030 254000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 387960000 7604 1399 7192 14410 11576 11576 1 9606 Homo sapiens 0.005620266238565819 ESSTVFELKR Unmodified 1194.6245 0.62445203 1399 A0A8I5KUS5;A0A384MDL3;Q15370;Q15370-2;B8ZZU8;I3L0M9;A0A0B4J296 TCEB2 Transcription elongation factor B polypeptide 2 yes no 0 0 1 7.5 0.5 1 1 45.569 45.632 3 0.0035112 11578 20230619_1887_Aki_TMTPro18x_K_F7 68.436 40.571 164660 204890 209390 174260 243910 189500 232360 204750 173530 181090 188750 120010 159440 119200 261010 137120 120940 106920 153090 187160 209210 179020 249350 191230 233170 207510 180820 182360 191470 124790 168180 124030 255210 136250 116970 101920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106860000 7605 1399 7193 14411;14412 11577 11577 1 9606 Homo sapiens 0.03492478326552373 ESTAEKDEL Unmodified 1020.4611 0.46113468 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A087WT78;A0A7P0T917;B4DU71;B4DHT9;Q58FF3 HSP90B1;HEL-S-125m;TRA1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 0 0 1 1.5 0.5 1 1 41.696 41.735 2 0.0032733 10625 20230619_1881_Aki_TMTPro18x_K_F2 91.853 50.201 97842 51634 121200 139990 173490 197280 131860 166000 177000 120400 180950 219850 155200 150170 179420 72682 210660 209580 90450 48041 122070 134630 175010 194190 136850 170450 177680 127200 184640 216000 160510 153160 183130 82307 201250 197620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 799060000 7606 3452 7194 14413;14414 11578 11578 1 9606 Homo sapiens -0.04827744515137056 ESTCSPTPDSTASLPPPPAPGLASPR Unmodified 2589.2381 0.23808138 3223 O14813 PHOX2A Paired mesoderm homeobox protein 2A yes yes 0 0 0 5.5 0.5 1 1 51.405 51.481 3 1.3449E-20 14525 20230619_1886_Aki_TMTPro18x_K_F6 160.84 151.8 13815 9831.5 10734 13760 11014 12671 14616 14029 13648 17230 16658 18699 19243 15823 15904 18189 19850 24192 12741 9037.4 11186 13553 11520 12923 14498 14328 14096 17275 17077 18808 19397 16555 16463 18566 18984 22898 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28360000 7607 3223 7195 14415;14416 11579;11580 11580 2 9606 Homo sapiens 0.007031862165149505 ESTESSNTTIEDEDVK Unmodified 1782.7643 0.76431215 1836 E9PBG7;Q13557-6;A0A994J5B0;D6R938;A0A8V8TNA7;A0A8V8TN65;A0A8V8TND4;Q13557-10;Q13557-8;E9PF82;Q13557-11;Q13557;B7Z2B0;A0A8V8TPK3;A0A8V8TN88;A0A994J516;A0A8V8TN60;A0A8V8TPY4;A0A8V8TPJ8;A0A8V8TNA1;A0A994J7X8;Q13557-12;H0Y9J2;Q92991 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 1 0 1 42.761 42.761 3 3.1676E-09 11297 20230619_1880_Aki_TMTPro18x_K_F1 144.29 135.03 47363 31878 45687 35719 48058 48283 48006 47813 62937 49036 65795 68324 65223 57079 55708 54362 75398 66113 43734 29244 46517 35959 49720 47879 48879 48904 63316 50105 67347 68094 66160 59100 57887 55345 71886 62704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175320000 7608 1836 7196 14417 11581 11581 1 9606 Homo sapiens -0.09575943498862216 ESTGAQVQVAGDMLPNSTER Oxidation (M) 2104.9695 0.96951109 3930;3929;2914 Q15365;Q53SS8;E9PFP8;P57721-4;P57721;J3QT27;Q5MJP6;P57721-2;P57721-3;P57721-5;Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DRD7;B4DLC0;F8W0G4;F8VXH9 PCBP1;PCBP3;PCBP2 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 no no 0 1 0 3 0.816 1 1 1 43.594 43.651 3 9.3689E-18 11192 20230619_1882_Aki_TMTPro18x_K_F3 169.51 158.73 85632 69404 78512 88184 96375 80038 87933 94101 108030 106220 109310 108700 112500 91371 107490 113470 102540 108420 79122 63697 80635 87418 98303 81952 89796 95478 109010 106760 112230 109650 114430 96004 109150 113380 98201 103010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1026899999.9999999 7609 3929;2914;3930 7197 14418;14419;14420 11582;11583 11583 1735 2 9606 Homo sapiens -0.038774882402321964 ESTGAQVQVAGDMLPNSTER Unmodified 2088.9746 0.97459647 3930;3929;2914 Q15365;Q53SS8;E9PFP8;P57721-4;P57721;J3QT27;Q5MJP6;P57721-2;P57721-3;P57721-5;Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DRD7;B4DLC0;F8W0G4;F8VXH9 PCBP1;PCBP3;PCBP2 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 no no 0 0 0 3 0.816 1 1 1 49.067 49.127 3 6.3503000000000004E-55 13539 20230619_1883_Aki_TMTPro18x_K_F4 218.11 198.42 102170 90091 99154 107830 85157 106600 108170 103350 126180 130090 138030 95260 118110 85642 118120 129440 124850 124740 94495 82609 100840 107430 90300 107800 108310 106530 127980 128980 139900 98129 121070 91083 120550 129060 119390 118520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2993299999.9999995 7610 3929;2914;3930 7197 14421;14422;14423 11584;11585 11585 2 9606 Homo sapiens -0.02633184377600628 ESTGNMVTGQTVCK Oxidation (M) 1526.6705 0.6704923 2356 B4E0B7;B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00 NCAPD2 Condensin complex subunit 1 yes no 0 1 0 5 0 1 38.851 38.943 3 0.00015473 9126 20230619_1885_Aki_TMTPro18x_K_F5 94.551 84.5 20455 15031 22876 20041 24850 22555 20256 23041 21308 24944 22831 19212 20699 17361 22327 20428 21816 18324 18921 13808 23039 19868 25487 22639 20746 23541 21740 24921 23241 19704 21266 18136 22635 20371 20854 17439 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93723000 7611 2356 7198 14424 11586 11586 1462 1 9606 Homo sapiens -0.07177612615828366 ESTGTSGPLQRPQLSK Unmodified 1684.8744 0.87441214 3086 H7C0G7;Q9H9Q4 NHEJ1 Non-homologous end-joining factor 1 yes no 0 0 1 4.5 3.5 1 1 41.537 41.536 3 2.9382E-14 10753 20230619_1880_Aki_TMTPro18x_K_F1 171.71 143.56 126720 104460 124120 142150 144560 160430 155620 136110 175050 180520 180520 174150 186510 159870 165890 196430 184890 196460 117160 95932 126730 140630 148850 160270 156820 141980 177520 179900 185170 176620 189200 167320 170270 196720 176800 186560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115670000 7612 3086 7199 14425;14426 11587;11588 11587 2 9606 Homo sapiens 0.05936991141516046 ESTLHLVLR Unmodified 1066.6135 0.61349341 1332;3737 Q5RKT7;A0A248RGE3;P62979;B2RDW1;Q8WYN9;Q96H31;Q5U5U6;Q9UFQ0;Q96C32;Q96MH4;L8B196;F5H747;J3QKN0;L8B4R0;A8K674;L8B4J3;L8B4Z6;L8B4M0;Q66K58;F5GXK7;Q5PY61;P0CG48;L8B4I8;B4DV12;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H265;F5H2Z3;Q5UGI3;F5H388;Q59EM9;P0CG47;M0R1M6;P62987;Q3MIH3;M0R2S1 RPS27A;HEL112;UBC;UBB;DKFZp434K0435;UbC;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 no no 0 0 0 4.67 2.36 1 1 1 1 1 1 45.491 45.542 3 1.552E-08 11675 20230619_1888_Aki_TMTPro18x_K_F8 196.99 138.01 220740 164070 211700 247240 207190 261330 219720 208110 320720 233940 223400 237120 248280 214090 202950 266170 259230 402530 203920 150920 215980 242840 216380 261810 223870 217090 316940 235420 234900 239790 250580 224610 210680 273970 248470 380350 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3404699999.9999995 7613 1332;3737 7200 14427;14428;14429;14430;14431;14432 11589;11590;11591;11592 11592 4 9606 Homo sapiens 0.08285120742925756 ESTMYPK Oxidation (M) 870.37932 0.3793193 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 1 0 4.5 0.5 1 1 36.977 37.045 2 0.015467 8350 20230619_1883_Aki_TMTPro18x_K_F4 104.76 72.622 160110 95685 157180 185500 239460 247410 197390 207650 239030 187170 259470 245850 220550 209570 224980 131490 292780 263970 147780 88414 161300 180530 241020 244440 202760 214310 241730 192160 263460 245560 226740 213330 231880 141130 279280 249420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117470000 7614 617 7201 14433;14434 11593;11594 11593 349 2 9606 Homo sapiens -0.061055184079236824 ESTMYPK Unmodified 854.3844 0.38440468 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 5.5 0.5 1 1 41.319 41.409 2 0.0079671 10134 20230619_1885_Aki_TMTPro18x_K_F5 121.29 90.574 170170 121310 184310 212270 218800 275980 209120 212360 282680 231670 276460 283710 278770 232680 240970 172890 322560 300270 157330 111830 186780 207480 224640 272530 213690 221870 283380 234840 284020 283670 282670 238750 249790 182080 307680 283930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114190000 7615 617 7201 14435;14436 11595 11595 1 9606 Homo sapiens -0.048612145453148514 ESTNLGNLEESSE Unmodified 1407.6001 0.60014735 2063 B4DRL9;A8K545;P24386 CHM Rab proteins geranylgeranyltransferase component A 1 yes no 0 0 0 1 0 1 49.21 49.21 2 3.2124E-06 14051 20230619_1880_Aki_TMTPro18x_K_F1 142.43 122.44 13664 12699 13246 12406 12721 16076 12974 13301 19451 17395 19000 14501 17359 18443 16251 19520 21519 21674 12642 11621 13478 12610 13292 15917 13271 13884 19423 17290 19409 15007 17748 18943 16853 19709 20539 20563 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20435000 7616 2063 7202 14437 11596 11596 1 9606 Homo sapiens -0.08734871408273648 ESTNSMETR Unmodified 1053.4397 0.43968773 2835 Q6FH24;D3DWY7;P61758-2;P61758 VBP1 Prefoldin subunit 3 yes no 0 0 0 1 0 1 28.982 28.982 2 0.048074 5616 20230619_1880_Aki_TMTPro18x_K_F1 67.563 45.415 2965.2 3029.7 8463.2 5889.7 8507.5 8078.3 5363.1 5836.9 4586.2 4998.2 8051.4 9268.7 6729.8 6279.9 9586.5 2948.5 11787 9060.8 2788.2 2793.6 8121 5739.8 8721.5 7950.2 5580 6096.7 4855.1 5223.6 8054.7 9101.7 7051 6404.3 9779.9 3380.5 11237 8551.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6077100 7617 2835 7203 14438 11597 11597 1 9606 Homo sapiens -0.08489452815501863 ESTSEQMPSFPEMVYYIQEK Unmodified 2422.0709 0.070864621 1731 A0A804HJA4;J3KN16;Q5VYK3;B3KXF2;R4GMY1;B3KV72 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 5 0 1 64.243 64.287 3 0.0030997 19864 20230619_1885_Aki_TMTPro18x_K_F5 67.928 5.8637 8733.9 8259.6 8778.4 10634 9015.1 11902 9101.5 10598 12580 10819 11536 12713 14071 10657 11739 15065 13561 13190 8084.2 7577.4 8930.2 10557 9369.5 11903 9284.1 10921 12576 10983 12002 12756 14163 11295 12097 14954 12955 12549 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38335000 7618 1731 7204 14439 11598 11598 1 9606 Homo sapiens -0.08328797652575304 ESTTTPGQYVLTGLQSGQPK Unmodified 2091.0484 0.048413341 2520 B4DL02;P29353-3;P29353-2;P29353-7;P29353;P29353-6;H0Y539;X6R6D0;Q59HB0;P29353-5 SHC1 SHC-transforming protein 1 yes no 0 0 0 8 0 1 56.41 56.467 3 3.9497E-05 16335 20230619_1888_Aki_TMTPro18x_K_F8 88.574 80.214 33390 30084 35147 39890 37476 42298 39283 38383 40329 35384 39092 45896 43180 36301 40473 39114 39824 42564 30907 27613 35623 39497 38786 42491 39542 39421 40969 36245 40399 45767 43804 37908 41160 39464 38128 40380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19433000 7619 2520 7205 14440 11599 11599 1 9606 Homo sapiens 0.04653107056310546 ESTVQGAYGSEDMK Unmodified 1500.6402 0.64023803 3519 P29083;Q53F88;C9IYL4 GTF2E1 General transcription factor IIE subunit 1 yes no 0 0 0 3 0 1 44.492 44.565 3 0.0005528 11655 20230619_1882_Aki_TMTPro18x_K_F3 88.561 79.031 45733 39868 43950 46626 49808 60076 54886 51379 74082 45588 54143 44279 42018 40918 47932 49221 45114 40737 42292 36550 44910 46708 51484 59518 55606 52939 73466 46417 55896 44952 43591 42721 48489 48860 43162 38798 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23937000 7620 3519 7206 14441 11600 11600 1 9606 Homo sapiens -0.09005648009360812 ESTYLSSLK Unmodified 1026.5233 0.523341 3939 Q15742-3;Q15742 NAB2 NGFI-A-binding protein 2 yes no 0 0 0 7 0 1 51.253 51.33 2 0.00035722 14182 20230619_1887_Aki_TMTPro18x_K_F7 120.12 58.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7621 3939 7207 14442 11601 11601 1 9606 Homo sapiens 0.011140266238726326 ESVEQQADSFK Unmodified 1266.5728 0.57281039 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YFD1;A0A2R8YD53;A0A2R8YGE5 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 2 0 1 46.941 47.016 2 0.014015 13060 20230619_1881_Aki_TMTPro18x_K_F2 91.549 62.806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7622 2865 7208 14443 11602 11602 1 9606 Homo sapiens -0.04981310157995722 ESVFTVEGGHR Unmodified 1216.5836 0.58364985 4405 Q99623;F5GY37;Q99623-2;J3KPX7;F5GWA7;B4DW05;A0A976LZI3;A0A7I2V5F0;F5H3X6;F5H2D2;A0A3G2KQ93;F5H0C5 PHB2 Prohibitin-2 yes no 0 0 0 4.5 1.12 1 1 1 1 39.16 39.229 3 7.4418E-31 9239 20230619_1882_Aki_TMTPro18x_K_F3 272.15 219.47 87716 68681 84137 89536 115620 110960 107790 116570 129390 93068 108950 106510 97927 86236 91944 105420 100450 112470 81060 63059 86259 88991 117300 110730 109790 118030 129650 95766 112240 106880 100040 90626 94152 105980 96109 106700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1004999999.9999999 7623 4405 7209 14444;14445;14446;14447 11603 11603 1 9606 Homo sapiens -0.01597862993048693 ESVLGNLAK Unmodified 929.5182 0.51819605 408 A0A024R6R2;Q8TD30-2;Q8TD30 GPT2 Alanine aminotransferase 2 yes no 0 0 0 7 0 1 51.805 51.879 2 0.014998 14456 20230619_1887_Aki_TMTPro18x_K_F7 76.1 45.026 62574 53737 56724 79105 84896 99223 73792 67151 99046 93109 95247 112260 90412 76501 98347 85169 90842 118730 57833 49389 58675 77964 85759 98037 75787 71552 99338 93323 97823 111750 92790 80595 99389 87363 87183 112310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43911000 7624 408 7210 14448 11604 11604 1 9606 Homo sapiens 0.05061767551910634 ESVLQFYPK Unmodified 1109.5757 0.57571092 1535 B3KMZ6;B2RDF5;A0A3R5W301;Q9UBT2;K7EPL2 UBA2 SUMO-activating enzyme subunit 2 yes no 0 0 0 4.5 3.5 1 1 57.405 57.431 2;3 1.0119E-05 16767 20230619_1888_Aki_TMTPro18x_K_F8 193.41 163.24 143480 118240 131390 146670 127680 149130 156490 156600 185290 167080 165490 150220 167520 140560 151680 177650 163320 165270 132590 108480 134540 145830 133810 150770 157000 159750 186300 167820 170700 153020 170160 147290 155310 177170 156170 157100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 130620000 7625 1535 7211 14449;14450 11605;11606 11606 2 9606 Homo sapiens 0.025306097574684827 ESVLQMMQAGQR Unmodified 1376.6541 0.65405438 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0;A4VCH6 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 1 0 1 54.929 54.929 2 0.0018981 16420 20230619_1880_Aki_TMTPro18x_K_F1 93.442 71.935 29749 19277 27030 27469 24692 38277 37993 31439 39288 36036 32404 36842 43025 36506 42737 37073 40305 48257 27452 17731 27676 27197 26275 37688 37548 32723 39679 36219 34084 37330 43559 37721 43297 37889 38643 45687 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28913000 7626 2417 7212 14451 11607 11607 1 9606 Homo sapiens -0.019206489912448887 ESVPEFPLSPPK Unmodified 1325.6867 0.68671794 2660 B5BU83;P16949;A2A2D0;Q96CE4;A0A140VJW2;P16949-2;Q59G27 STMN1 Stathmin yes no 0 0 0 5.71 1.03 1 2 2 2 57.998 58.049 2;3 2.1367E-05 17023 20230619_1886_Aki_TMTPro18x_K_F6 122.7 99.782 344240 276180 314200 344140 308000 359190 332390 322300 397190 372130 383040 386550 374130 347420 406560 410160 388310 447580 318040 253440 321770 342120 321390 361210 335780 333250 400370 373970 393410 390450 383850 362920 411880 413260 372120 424500 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4086499999.9999995 7627 2660 7213 14452;14453;14454;14455;14456;14457;14458 11608;11609;11610;11611 11609 4 9606 Homo sapiens 0.03690204674899178 ESVQQEPEREQVQPK Unmodified 1809.8857 0.88570511 4379 Q96LR5;F8WF15;F8W8F0;C9J180 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 yes no 0 0 1 2.5 0.5 1 1 35.735 35.792 3 1.5979E-07 7992 20230619_1881_Aki_TMTPro18x_K_F2 127.61 103.57 46624 39089 51529 43676 36277 33682 31862 32099 41158 54390 61073 60401 64091 50698 46735 72959 81056 65861 43156 35826 51631 43637 38727 34829 32743 33525 42253 53935 61821 60745 64496 53795 49861 72478 77117 62686 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52411000 7628 4379 7214 14459;14460 11612;11613 11612 2 9606 Homo sapiens 0.013157684449879525 ESVSTASDQPSHSLER Unmodified 1728.7915 0.79147037 1808 Q8TEW0;Q8TEW0-3;A0A8Q3WLH5;Q8TEW0-2;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-5;Q8TEW0-8;Q8TEW0-10;F5GZI3;Q8TEW0-9;Q5VWU8;Q8IX28;Q8IX26;Q8IX27 PARD3 Partitioning defective 3 homolog yes no 0 0 0 2 0 1 33.306 33.364 3 1.2232E-33 7017 20230619_1881_Aki_TMTPro18x_K_F2 244.17 225.09 9201.4 7620.3 11225 11402 10620 13052 12093 12770 13031 12059 15319 13051 13969 10842 12383 11372 15871 13047 8524.4 7006.1 11228 11222 11123 13058 12144 13044 13303 12255 15533 13136 14218 11292 12804 11518 15132 12384 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18366000 7629 1808 7215 14461 11614 11614 1 9606 Homo sapiens -0.043773703771421424 ESVTDYTTPSSSLPNTVATNNTK Unmodified 2426.1449 0.1448925 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-2;Q9Y520-3;A0A2R8YET2;A0A2R8Y7F4;B4E3S2 PRRC2C Protein PRRC2C yes no 0 0 0 6 0 1 51.937 52.014 3 9.8051E-63 14770 20230619_1886_Aki_TMTPro18x_K_F6 226.57 199.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7630 2894 7216 14462 11615 11615 1 9606 Homo sapiens -0.01113414965038828 ESVVDYCNR Unmodified 1140.487 0.48697227 1890 F8WF48;Q3KR08;A0JLN5;R9WWI7;D3DNQ1;Q99442 SEC62;TLOC1 Translocation protein SEC62 yes no 0 0 0 3 0 1 39.167 39.221 2 3.9068E-06 9256 20230619_1882_Aki_TMTPro18x_K_F3 186.3 148.57 103570 79585 83439 104020 124740 132790 110420 117470 190770 124650 132930 136870 133060 118340 120440 133720 165610 172770 95576 73079 87174 103360 126090 131740 114560 121220 187300 126130 139100 137750 135320 123540 125260 136260 158070 163660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94779000 7631 1890 7217 14463 11616 11616 1 9606 Homo sapiens -0.07765173544498793 ESWEMNSEEK Oxidation (M) 1283.4976 0.49759654 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 1 0 1 0 1 41.977 41.977 2 0.002863 10970 20230619_1880_Aki_TMTPro18x_K_F1 93.178 72.478 22448 20453 24301 23402 23160 22194 25951 22334 34757 31955 31530 33972 32925 28711 27194 30623 37367 37254 20786 18744 24505 23387 24203 22557 26269 23079 34779 31851 32570 34192 33304 29899 28332 31104 35653 35314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29444000 7632 3789 7218 14464 11617 11617 2473 1 9606 Homo sapiens -0.13281235680756254 ESWEMNSEEK Unmodified 1267.5027 0.50268192 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 2 0 1 46.378 46.457 2 1.5685E-09 12801 20230619_1881_Aki_TMTPro18x_K_F2 232.41 149.76 58364 52350 52264 58602 44317 60062 51420 49303 70923 79993 73835 72254 84638 68247 60885 78807 95430 80446 53953 47969 53525 58689 46993 60376 52051 51945 71330 78977 76042 73542 84919 71123 64325 79065 90869 76445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51261000 7633 3789 7218 14465 11618 11618 1 9606 Homo sapiens -0.12036931818124685 ESWISDIR Unmodified 1004.4927 0.49270958 974 P57737-3;A0A0A6YYL4;P57737;P57737-4;P57737-2;I3L167;I3L359;I3L1G9;I3NI06;I3L2Y6;I3L1M1 CORO7;CORO7-PAM16 Coronin-7;Coronin yes no 0 0 0 4 0 1 52.641 52.664 2 0.012623 15208 20230619_1883_Aki_TMTPro18x_K_F4 95.605 65.42 92656 82167 84206 93867 104140 113830 98489 110620 155500 117700 112960 109460 115650 97091 116170 117300 114780 125120 85657 75308 86597 94110 106570 113530 101370 113360 153420 118410 117980 111080 117980 101660 118060 117990 109910 118710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38791000 7634 974 7219 14466 11619 11619 1 9606 Homo sapiens -0.009357069705174581 ESWLLPGSNDLLLEVGPR Unmodified 1994.0473 0.047291129 2124 A8K9T9;A8K8N7;O15067;J3QSG0;J3QSH6;J3KTL4 PFAS Phosphoribosylformylglycinamidine synthase yes no 0 0 0 6.5 0.5 1 1 64.719 64.754 3 0.0021953 19994 20230619_1887_Aki_TMTPro18x_K_F7 70.334 59.995 40339 36021 46848 49355 41041 46230 40588 37640 36141 48120 55603 48700 56394 47489 51573 50451 51649 68869 37372 33074 46969 48689 43050 46786 40858 39360 37892 48076 56124 49394 57281 49224 52532 51681 49536 65153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111100000 7635 2124 7220 14467;14468 11620 11620 1 9606 Homo sapiens 0.09002937478089734 ESYDAPPTPSGAR Unmodified 1346.6103 0.61025853 2410 B3KT25;Q96S55-2;Q96S55 WRNIP1 ATPase WRNIP1 yes no 0 0 0 3 0 1 37.583 37.636 2 0.0038129 8614 20230619_1882_Aki_TMTPro18x_K_F3 93.096 84.563 10168 8073.1 10097 14315 10200 12794 13842 13600 16074 15299 18343 23845 20025 17684 21455 20553 20316 21206 9399.4 7440.2 10295 13909 10697 13058 13813 13894 16332 15627 18831 23595 20454 18585 21724 20650 19455 20132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8825200 7636 2410 7221 14469 11621 11621 1 9606 Homo sapiens -0.04918218892407822 ESYDDVSSFR Unmodified 1203.5044 0.50439647 3090 Q6IB29;H7C2Q8;Q99848 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 0 0 0 1.5 0.5 1 1 44.79 44.831 2 3.2033999999999996E-19 12090 20230619_1881_Aki_TMTPro18x_K_F2 253.74 240.03 206490 160380 171450 231680 242660 270120 233100 227150 392480 265320 244920 245930 252040 243630 241620 289340 300880 286230 190600 147430 178530 228400 246580 269170 240250 236060 384610 265910 258500 250490 256870 253700 249410 289720 287210 271950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 299800000 7637 3090 7222 14470;14471 11622;11623 11623 2 9606 Homo sapiens -0.08921554737867154 ESYEVSLTQK Unmodified 1182.5768 0.57683314 593 A0A024R9U3;Q9NX40;D6RDK6;D6RBN5 OCIAD1 OCIA domain-containing protein 1 yes no 0 0 0 4 0 1 48.389 48.429 3 0.00010933 13253 20230619_1883_Aki_TMTPro18x_K_F4 128.27 79.289 219030 151870 195340 229120 214160 236380 234070 214610 277550 261040 271150 296100 297860 242630 267820 313380 304170 345510 202160 139740 200900 224990 221600 237900 236140 222110 280050 262440 279830 297160 301680 255870 275140 315420 290970 327680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 243190000 7638 593 7223 14472 11624;11625 11625 2 9606 Homo sapiens -0.007152206643013415 ESYPHIK Unmodified 872.43922 0.43921744 1189 A0A140VJN8;O60664-4;O60664-3;O60664;K7EL96;K7ER39 PLIN3 Perilipin-3 yes no 0 0 0 6 0 1 38.77 38.853 3 0.0051746 9074 20230619_1886_Aki_TMTPro18x_K_F6 101.64 53.795 85202 49758 83332 85585 127340 123550 98151 108770 128460 107070 118750 109530 104570 93961 103950 117870 141770 132610 78629 45901 85454 83922 127930 121690 101600 112020 128730 108430 121600 110620 107230 98708 107880 118840 135220 125830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50744000 7639 1189 7224 14473 11626 11626 1 9606 Homo sapiens -0.0021045968238695423 ESYPVFYLFR Unmodified 1319.655 0.65502388 3526 V9HW71;P30040;F8VY02 HEL-S-107;ERP29 Endoplasmic reticulum resident protein 29 yes no 0 0 0 3 0 1 63.833 63.864 2 0.00047268 20044 20230619_1882_Aki_TMTPro18x_K_F3 146.58 106.48 113460 115160 84147 95330 145080 223410 132470 135080 409160 27187 15038 29353 33771 27739 62968 39178 31005 31611 104850 105230 88999 99579 146730 214030 142350 141120 384160 34296 34842 29716 35443 29262 61619 38841 29978 30102 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35252000 7640 3526 7225 14474 11627 11627 1 9606 Homo sapiens 0.007982567115959682 ESYSIYVYK Unmodified 1150.5546 0.55464113 721;4226 A0A024RCJ2;Q16778;P33778;P23527;P06899;Q6DRA6;Q6DN03;Q8N257 HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST2H2BD;HIST2H2BC;HIST3H2BB Histone H2B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Putative histone H2B type 2-D;Putative histone H2B type 2-C;Histone H2B type 3-B no no 0 0 0 4.3 2.9 2 2 2 1 3 53.945 53.982 2;3 8.5666E-05 15978 20230619_1880_Aki_TMTPro18x_K_F1 175.44 131.74 1623700 1249400 1390100 1422700 1111400 1369500 1242700 1319300 1722000 1654500 1685700 1547900 1782600 1585500 1396800 1978100 1877100 1900600 1499000 1145700 1427400 1422300 1182700 1387800 1261100 1360300 1725700 1651500 1733900 1578600 1798900 1654800 1456900 1975400 1791500 1805900 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 15480000000 7641 721;4226 7226 14475;14476;14477;14478;14479;14480;14481;14482;14483;14484 11628;11629;11630;11631;11632;11633;11634 11628 7 9606 Homo sapiens -0.014614003420547306 ESYSVYVYK Unmodified 1136.539 0.53899107 73 U3KQK0;A0A024QZZ7;A0A024RCJ9;A0A024RCL8;B2R4S9;B4DR52;I6L9F7;Q5QNW6-2;Q99879;Q99877;Q5QNW6;P62807;P58876;O60814;Q93079;Q99880;P57053;A8K9J7;Q0D2M2 HIST1H2BN;HIST1H2BD;HIST1H2BK;HIST1H2BI;HIST1H2BM;HIST2H2BF;HIST1H2BC;HIST1H2BH;HIST1H2BL;H2BFS Histone H2B;Histone H2B type 2-F;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-H;Histone H2B type 1-L;Histone H2B type F-S yes no 0 0 0 5.67 2.05 1 1 1 2 1 51.637 51.704 2;3 4.1064E-08 14276 20230619_1887_Aki_TMTPro18x_K_F7 202.45 160.47 3670700 2818900 2648300 3309700 2952600 3386800 3393500 3747100 4975300 4387000 4138900 3873500 4568600 4031000 2512200 5943000 3132600 4543800 3385100 2585700 2784000 3303400 3061300 3427300 3444200 3818500 4945100 4385600 4299000 3965800 4552900 4251600 2645100 5852400 3001100 4325300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 123090000000 7642 73 7227 14485;14486;14487;14488;14489;14490 11635;11636;11637;11638;11639;11640 11638 6 9606 Homo sapiens -0.023816868590984086 ESYYQLMK Unmodified 1060.4899 0.48993238 3479 P19623;K7EQ47 SRM Spermidine synthase yes no 0 0 0 7.5 0.5 1 1 52.759 52.832 2 0.00073272 14853 20230619_1887_Aki_TMTPro18x_K_F7 157.33 114.21 245050 204230 215320 244810 177580 238520 225790 231390 283340 224190 217380 171190 200170 171830 256280 234530 211820 185420 226390 187310 220850 243820 189240 241420 226670 236710 282550 225490 225190 176460 207510 180510 257040 232010 202910 176730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123190000 7643 3479 7228 14491;14492 11641;11642 11641 2 9606 Homo sapiens -0.03789298419678744 ETAAACVEK Unmodified 977.4488 0.44879585 2916 E9PGT1;Q15631;B3KRM8;B7Z5D9 TSN Translin yes no 0 0 0 3 0 1 38.825 38.879 3 0.0008337 9129 20230619_1882_Aki_TMTPro18x_K_F3 101.65 64.455 30112 16190 36872 37845 49110 49254 40035 43481 51098 33771 51764 53657 41341 40122 44926 29789 52088 55594 27835 15016 37076 36544 49759 48774 41249 44556 51373 35282 52638 53088 42731 41291 45931 31597 49793 52517 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46375000 7644 2916 7229 14493 11643 11643 1 9606 Homo sapiens -0.04083059459162541 ETAATFLK Unmodified 879.47018 0.47018322 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;I3L4U9;A0A0D9SFI9 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 0 7 0 1 50.286 50.367 2 0.0042389 13660 20230619_1887_Aki_TMTPro18x_K_F7 117.04 54.322 121640 80893 103270 128160 112040 151670 120940 124760 168200 135000 124610 144540 142440 119610 122230 148670 141870 148260 112200 74494 106750 125730 116280 150820 122850 129590 166890 136270 130790 145390 143880 125740 125870 148840 135600 140800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 888140000 7645 534 7230 14494 11644 11644 1 9606 Homo sapiens 0.02562693631853108 ETADTDTADQVMASFK Unmodified 1728.7512 0.75124504 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;B4DFY0;B3KUX9;A1L0V1;H0YJW3 ACTN1 Alpha-actinin-1 yes no 0 0 0 3 0 1 59.61 59.64 2 0.0053873 18262 20230619_1882_Aki_TMTPro18x_K_F3 86.313 73.332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7646 387 7231 14495 11645 11645 1 9606 Homo sapiens -0.08398053091991642 ETAEADVASLNR Unmodified 1274.6103 0.61025853 3083 H7BYY1;B7Z596;F5H7S3;Q1ZYL5;P09493-2;B7Z722;D9YZV7;P09493-5;A0A494BZZ2;H0YKJ4;H0YK48;Q59GR8 TPM1 Tropomyosin alpha-1 chain yes no 0 0 0 1.5 0.5 1 1 42.255 42.294 2 1.4536E-31 10884 20230619_1881_Aki_TMTPro18x_K_F2 285.27 250.34 44170 37289 41794 48789 42081 47713 49226 43321 61189 54766 59296 49942 59545 43539 53544 51167 61975 51367 40833 34229 42704 48297 43910 48226 49574 44894 61557 54612 60868 50721 60435 45567 54999 51320 59142 48826 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91545000 7647 3083 7232 14496;14497 11646 11646 1 9606 Homo sapiens -0.016062188923797294 ETAEADVASLNRR Unmodified 1430.7114 0.71136956 3083 H7BYY1;B7Z596;F5H7S3;Q1ZYL5;P09493-2;B7Z722;D9YZV7;P09493-5;A0A494BZZ2;H0YKJ4;H0YK48;Q59GR8 TPM1 Tropomyosin alpha-1 chain yes no 0 0 1 3 0 1 38.212 38.266 3 0.001713 8891 20230619_1882_Aki_TMTPro18x_K_F3 65.809 35.239 39794 32597 47085 43011 45843 34770 49092 44913 44784 38192 42242 31279 34395 29366 44940 37045 41759 28765 36853 29927 47162 42497 47633 36059 49188 45024 45741 38744 43072 32054 35853 30754 45289 36672 39896 27456 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32643000 7648 3083 7233 14498 11647 11647 1 9606 Homo sapiens 0.013242328103160617 ETAELSETLTR Unmodified 1248.6198 0.61976058 722 A0A1U9X8D3;A0A1U9X8D1;A0A1U9X8C7;A0A1U9X8C1;A0A0G2JHC2;A0A024RCJ8;Q6NYC8;Q6NYC8-2 hCG_1821276;PPP1R18 Phostensin yes no 0 0 0 2 0 1 45.968 46.047 2 2.5335E-11 12611 20230619_1881_Aki_TMTPro18x_K_F2 171.34 144.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7649 722 7234 14499 11648 11648 1 9606 Homo sapiens 0.005395493931473538 ETAENYLGHTAK Unmodified 1332.631 0.63099397 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;Q2F839 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 5 1.41 1 1 1 1 1 41.058 41.128 3 6.0575E-18 9957 20230619_1885_Aki_TMTPro18x_K_F5 225.72 154.37 717570 538760 618180 685220 707700 845330 757550 808890 1172200 981060 1005100 1236300 1428600 1170700 810330 1596500 1500200 1583100 662410 494620 638100 681980 730910 841590 773550 833270 1164000 990720 1058300 1241700 1415800 1232300 877290 1594200 1429300 1503500 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4559000000 7650 1488 7235 14500;14501;14502;14503;14504 11649;11650;11651;11652 11651 4 9606 Homo sapiens -0.02201628512739262 ETAESVLK Unmodified 875.46001 0.46001246 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;O14992;Q7KYN0 HSPA4;HEL-S-5a;HS24/p52;HS24/P52 Heat shock 70 kDa protein 4 yes no 0 0 0 2.5 0.5 1 1 44.428 44.501 2 0.00016432 11599 20230619_1882_Aki_TMTPro18x_K_F3 171.38 56.664 256870 179580 211790 241260 246270 306620 255880 269000 401020 337570 358280 414880 465790 378540 251680 400980 504390 438650 236960 165010 219630 239330 254020 304090 261870 279190 398540 340080 374340 416250 461950 392950 274400 404270 479700 416480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175240000 7651 3544 7236 14505;14506 11653;11654 11654 2 9606 Homo sapiens 0.017300859066381236 ETALLIDPK Unmodified 998.56481 0.56481189 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B3KU93;A0A8V8TQ95;B7Z1H4;B3KTP2;A6NEC2;E9PPZ2;B7Z6T6;A6NEC2-2;E9PI82 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 4.5 0.5 1 1 54.425 54.466 2 1.4683E-06 15966 20230619_1883_Aki_TMTPro18x_K_F4 137.13 103.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7652 2933 7237 14507;14508 11655;11656 11655 2 9606 Homo sapiens 0.06547207383175646 ETARPSCEIVDGTR Unmodified 1589.7468 0.74676879 1595 Q92538;Q92538-2;Q92538-3;A0A669KBG8;A0A669KB10;A0A7P0RGV0;A0A7I2YQM2;A0A7I2V2L5;A0A7I2V514;A0A7I2YQ65;A0A7I2V3Y5;A0A7I2V529;A0A7I2V4K2;A0A7I2V2L4;Q05BW6;A0A7I2V2F8;A0A7I2V2U1;A0A7I2YQM0;A0A7I2V4F1 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes no 0 0 1 3 0 1 34.834 34.895 3 0.0083978 7523 20230619_1882_Aki_TMTPro18x_K_F3 70.654 50.977 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7653 1595 7238 14509 11657 11657 1 9606 Homo sapiens -0.024514727242149092 ETASELLMR Unmodified 1048.5223 0.52229515 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 4 0 1 48.096 48.137 2 0.00028025 13109 20230619_1883_Aki_TMTPro18x_K_F4 114.64 82.703 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7654 2337;3778;3779 7239 14510 11658 11658 1 9606 Homo sapiens -2.5110166916419985E-05 ETASQTTSSEISSVMVGETEASSSSQDK Unmodified 2862.256 0.25603545 4626 Q9NY27-2;Q9NY27-3;Q9NY27;H7C559 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes no 0 0 0 2 0 1 55.036 55.057 3 6.5324E-39 16644 20230619_1881_Aki_TMTPro18x_K_F2 201.97 191.27 7259 6047.6 7493.1 6715.1 6293.8 7250.7 7730.4 8524.3 6718.6 7922.7 6983.6 10431 9496.1 7632 7830.4 10712 9213.9 10651 6714.8 5542.6 7570 6740.3 6668.3 7321.1 7686.1 8602.1 6922.8 8107.2 7287.5 10373 9531.5 8127.2 8084.5 10702 8812.4 10112 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40561000 7655 4626 7240 14511 11659 11659 1 9606 Homo sapiens -0.10060232900696064 ETATCLAWCHDNK Unmodified 1604.6712 0.671161 2507 D6RE80;D6REW7;B4DJP8;B4DQT1;B4DUB2;D3DVP1;B4DVN3;E7ESC7;Q7L5Y9 MAEA Macrophage erythroblast attacher yes no 0 0 0 5 0 1 43.849 43.928 3 4.4256E-05 11188 20230619_1885_Aki_TMTPro18x_K_F5 113.24 85.591 35288 29474 36004 38872 33961 44250 38799 39635 46142 43421 37862 45137 48502 34990 36461 49483 51010 46940 32639 27058 36510 38545 35627 44209 39072 40910 46283 43734 39742 45381 48570 37219 38160 49309 48637 44625 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21216000 7656 2507 7241 14512 11660 11660 1 9606 Homo sapiens -0.10698773176090981 ETCAWFTDNYEQAR Unmodified 1789.7366 0.73659803 1246 A0A140VKC8;Q13630 TSTA3 GDP-L-fucose synthase yes no 0 0 0 3 0 1 54.102 54.155 3 4.9658E-05 16024 20230619_1882_Aki_TMTPro18x_K_F3 99.941 95.473 63261 52538 57828 53207 63372 75907 61273 64176 94267 54204 52533 48243 59333 44045 59562 59563 64602 61796 58459 48113 59254 54012 65458 74770 62901 66075 92393 55233 56134 49146 60337 46437 60837 59726 61742 58681 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35738000 7657 1246 7242 14513 11661 11661 1 9606 Homo sapiens -0.12668080449384433 ETCLIPAVQEPK Unmodified 1383.7068 0.70680145 2509 B4DK32;Q14139;Q14139-2 UBE4A Ubiquitin conjugation factor E4 A yes no 0 0 0 5 0 1 53.262 53.334 3 0.00107 15215 20230619_1885_Aki_TMTPro18x_K_F5 87.641 74.66 61859 47636 56933 63473 56476 68236 60248 64252 70371 64229 75377 70047 71324 69173 68717 79179 68413 77439 57140 43750 58280 62846 58871 68522 60871 65914 71284 65112 76890 70872 72848 71867 69969 79286 65523 73537 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45731000 7658 2509 7243 14514 11662 11662 1 9606 Homo sapiens 0.030296323431912242 ETCLITFLLAGIECPR Unmodified 1891.9536 0.95359044 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299;H7C597 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 0 2 0 1 67.219 67.225 3 0.0037292 21717 20230619_1881_Aki_TMTPro18x_K_F2 69.729 56.851 1455.8 1793.9 1413.1 2890.8 2382.7 902.92 1802.7 1992.9 2463.9 2213.7 1989.4 2913.7 2532.3 2478.6 1810 2610.1 2220.2 1669.3 1350.1 1648.9 1460.1 2800.4 2370 1093 1871.3 1969.6 2455.6 2245.9 2092.6 2908 2535.6 2573.9 1880.1 2566.9 2116.5 1597.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2533300 7659 1229 7244 14515 11663 11663 1 9606 Homo sapiens 0.04329178779812537 ETCSTLAESPR Unmodified 1249.5609 0.5608655 1743 A0A8B0RAT7;Q6P2E9;Q6P2E9-2 EDC4 Enhancer of mRNA-decapping protein 4 yes no 0 0 0 2 0 1 35.408 35.464 2 7.0444E-12 7890 20230619_1881_Aki_TMTPro18x_K_F2 201.33 150.63 25500 16173 24385 25097 24405 26541 23469 24236 30244 23574 27101 27020 28257 25183 21779 29386 32673 29028 23538 14893 24864 24620 25335 26667 23937 24906 30282 23983 27994 27225 28516 26251 22902 29421 31131 27588 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41145000 7660 1743 7245 14516 11664 11664 1 9606 Homo sapiens -0.053932501728468196 ETCVSGEDPTQGADLSPDEK Unmodified 2133.9008 0.90082241 3790;4031 Q5CZB5;Q02952-3;Q02952-2;Q02952 DKFZp686M0430;AKAP12 A-kinase anchor protein 12 no no 0 0 0 2 0 1 47.61 47.682 3 3.6217E-16 13332 20230619_1881_Aki_TMTPro18x_K_F2 156.08 139.77 30302 24243 24658 25767 22219 23598 29750 26170 30671 32173 33863 35355 40433 34296 33658 46342 40013 43441 27972 22214 25489 25886 23475 24102 29585 26734 31330 32290 34890 35735 40741 36044 34767 46173 38247 41279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140950000 7661 4031;3790 7246 14517 11665 11665 1 9606 Homo sapiens -0.12077197330609124 ETDAFVCRPNAALCR Unmodified 1778.8192 0.81922222 2329 B2RMQ4;Q8WWK9-6;Q8WWK9-5;Q8WWK9 CKAP2 Cytoskeleton-associated protein 2 yes no 0 0 1 7 0 1 43.156 43.235 3 0.0078821 10607 20230619_1887_Aki_TMTPro18x_K_F7 71.513 56.637 40274 32666 36142 41036 41997 45418 39204 44849 53140 44822 53432 41849 47251 35955 42088 41876 50401 42206 37206 29976 37170 40808 43114 45582 40139 45837 53322 45223 54444 42460 48150 37622 43343 42010 48086 40114 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20699000 7662 2329 7247 14518 11666 11666 1 9606 Homo sapiens -0.03903461922209317 ETDEEPEEPGRR Unmodified 1442.6274 0.62736516 238 Q76KP0;A0A024R3F9;A0A024R3D5;E9PJG7;A0A024R3E8;Q8IYC8;A0A024R3D7;P56817-4;P56817-3;P56817-2;P56817 BACE;BACE1 Beta-secretase 1 yes no 0 0 1 1 0 1 28.998 28.998 3 8.8207E-08 5588 20230619_1880_Aki_TMTPro18x_K_F1 167.2 125.17 7749.3 3757.8 6595.1 7588.2 6879.9 6499.8 8072.9 7570.2 10724 7591.9 10291 11087 11873 8994.8 10204 5157.8 11908 9748.3 7138.5 3478.7 6804.9 7328.2 7153.9 6676.4 8149.9 7666.2 10743 7782.8 10652 11014 11980 9154.5 10469 5520.5 11362 9218.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12545000 7663 238 7248 14519 11667 11667 1 9606 Homo sapiens -0.07624343077259255 ETDGTEGTVEIETVK Unmodified 1606.7574 0.75737628 4289 Q8WY54 PPM1E Protein phosphatase 1E yes yes 0 0 0 1.5 0.5 1 1 49.202 49.202 3 2.0556E-05 14038 20230619_1880_Aki_TMTPro18x_K_F1 104.7 90.666 30972 25073 26329 32378 24409 26981 29342 26938 31914 33923 36052 38820 39033 32658 35126 40466 43817 46139 28602 23015 27139 32019 25650 27695 29382 27735 32542 34053 36944 38974 39562 34313 36296 40837 41856 43755 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47252000 7664 4289 7249 14520;14521 11668;11669 11668 2 9606 Homo sapiens -0.02173211588774393 ETDLLILFK Unmodified 1090.6274 0.62741214 2662 B5BUB5;P05455;Q14730;Q9UMH6 SSB Lupus La protein yes no 0 0 0 7.67 0.471 1 2 64.425 64.448 2;3 0.0001032 19715 20230619_1888_Aki_TMTPro18x_K_F8 155.1 111.4 175100 120120 131590 184490 112340 179510 157690 150000 289260 226090 173000 286710 303650 319670 178070 463760 339280 497380 161420 110550 137400 180770 120260 181020 160270 157440 282610 226590 189290 289480 300510 336040 193830 464600 324160 471480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 656280000 7665 2662 7250 14522;14523;14524 11670;11671 11671 2 9606 Homo sapiens 0.08572353451381787 ETDLLLDDSLVSIFGNR Unmodified 1905.9684 0.96837211 3528 V9HW35;P30044-2;P30044;P30044-3;P30044-4 HEL-S-55;PRDX5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 5 0.816 1 1 1 66.082 66.114 3 3.3896999999999998E-40 20612 20230619_1885_Aki_TMTPro18x_K_F5 267.07 241.08 15696 12383 16221 16494 16580 13353 18893 18825 20295 18590 21588 18211 17725 20624 18328 22633 21426 25299 14514 11372 16436 16286 17212 13879 18962 18849 20635 18791 21899 18611 18282 21282 18824 22847 20497 23987 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159020000 7666 3528 7251 14525;14526;14527 11672;11673 11673 2 9606 Homo sapiens 0.051626654531219174 ETDLQELFRPF Unmodified 1393.6878 0.68778057 3172 K7ER90 EIF3G yes yes 0 0 1 5 0 1 64.036 64.082 2 0.0088494 19802 20230619_1885_Aki_TMTPro18x_K_F5 89.827 60.017 29813 22625 25168 32734 22200 33169 31711 28669 37891 37038 35251 38518 38912 35951 35141 41196 37610 41290 27519 20800 25969 32207 23636 33373 31601 29842 38149 37041 36475 38936 39440 37433 35972 41304 35987 39203 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25228000 7667 3172 7252 14528 11674 11674 1 9606 Homo sapiens 0.00668419043790891 ETDREAVATAVQR Unmodified 1444.727 0.72701962 18 D6RB59;A0A024QYZ6;O60645;D6RBR9 EXOC3 Exocyst complex component 3 yes no 0 0 1 3 0 1 34.391 34.452 3 5.0562E-05 7349 20230619_1882_Aki_TMTPro18x_K_F3 108.71 89.638 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7668 18 7253 14529 11675 11675 1 9606 Homo sapiens 0.022445193273597397 ETDVFWK Unmodified 923.43888 0.43888309 3546 P35251-2;P35251;Q14756 RFC1;LLDBP Replication factor C subunit 1 yes no 0 0 0 5 0 1 55.717 55.781 2 0.055239 16161 20230619_1885_Aki_TMTPro18x_K_F5 80.18 30.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7669 3546 7254 14530 11676 11676 1 9606 Homo sapiens -0.025898794022282345 ETDVVLK Unmodified 802.44363 0.44363412 3790;4031 Q5CZB5;Q02952-3;Q02952-2;Q02952 DKFZp686M0430;AKAP12 A-kinase anchor protein 12 no no 0 0 0 3 0 1 45.932 46.008 2 0.052567 12318 20230619_1882_Aki_TMTPro18x_K_F3 88.942 7.3078 240300 153110 220990 240890 237450 267010 240830 264570 320960 273780 337950 384570 346350 287400 324950 250080 397620 385860 221750 141010 226450 236280 245650 267830 245200 270690 322910 279600 346600 381740 352200 297860 334370 259770 379650 365090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140720000 7670 4031;3790 7255 14531 11677 11677 1 9606 Homo sapiens 0.034510047405206024 ETEGADSPRPEDSGIVPR Unmodified 1910.897 0.89699808 2628 B4DZ92;Q5T481 RBM20 RNA-binding protein 20 yes no 0 0 1 1 0 1 38.765 38.765 3 2.6729E-09 9570 20230619_1880_Aki_TMTPro18x_K_F1 126.07 113.23 13961 10122 10468 14828 11762 17283 13865 14069 20813 17827 18728 20347 20761 18240 16574 19754 25963 25337 12873 9308.8 10976 14605 12228 17200 14066 14697 20718 17905 19406 20463 20941 18971 17462 20128 24746 24009 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26457000 7671 2628 7256 14532 11678 11678 1 9606 Homo sapiens -0.022014542515307767 ETEGDVTSVK Unmodified 1063.5033 0.50333384 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 1.5 0.5 1 1 40.614 40.651 3 0.00087721 10090 20230619_1881_Aki_TMTPro18x_K_F2 94.692 50.383 210130 116610 242470 248550 316430 368810 244710 305480 308810 239370 358240 396180 327420 311560 372260 234070 380390 353960 194160 107960 244760 241440 321090 362010 253140 314510 312610 250330 364240 391990 337450 319970 377400 243690 363700 335020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 430370000 7672 3621 7257 14533;14534 11679 11679 1 9606 Homo sapiens -0.025877691067535125 ETEISLK Unmodified 818.43855 0.43854874 3306 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 3.5 0.5 1 1 46.828 46.889 2 0.0072494 12752 20230619_1882_Aki_TMTPro18x_K_F3 126.67 31.047 110090 75651 106120 120700 130010 138790 118090 112130 160660 142970 157630 164120 151310 131950 146640 135830 165960 176700 101660 69662 108570 118330 132880 138320 121060 117260 161100 143540 161630 164470 154440 137420 150200 138760 158670 167360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232070000 7673 3306 7258 14535;14536 11680 11680 1 9606 Homo sapiens 0.022067008779004027 ETELELR Unmodified 888.45526 0.45526144 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;Q59F36;O95654 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 0 0 1 0 1 42.373 42.373 2 0.0070326 11133 20230619_1880_Aki_TMTPro18x_K_F1 128.37 35.543 222500 176730 223720 230890 255560 279380 251370 252410 343910 281790 317710 287270 318500 247400 263580 325340 331440 305840 205710 162260 227670 229330 262950 278200 256540 260480 343870 283540 326920 290240 322340 260720 273070 324410 316280 290790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130490000 7674 1717 7259 14537 11681 11681 1 9606 Homo sapiens 0.006572017638632133 ETENDDLTNVIQK Unmodified 1517.7209 0.72093119 3354 O95373;B3KQG6 IPO7 Importin-7 yes no 0 0 0 2.5 0.5 1 1 51.638 51.694 3 5.9457E-16 15176 20230619_1881_Aki_TMTPro18x_K_F2 210.93 180.67 65392 42782 55177 72849 62135 85088 68660 70289 101930 96441 100850 113920 139150 119590 81740 162890 139220 156210 60313 39438 57135 71171 64385 84686 69864 73534 101940 96666 105210 115140 138150 125440 87756 162350 132770 148380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 797460000 7675 3354 7260 14538;14539 11682 11682 1 9606 Homo sapiens -0.01722043694826425 ETEPVEAYVIQK Unmodified 1404.7137 0.71366097 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 3 0.816 1 1 1 53.916 53.948 3 1.4043E-13 15896 20230619_1882_Aki_TMTPro18x_K_F3 170.89 134.04 336750 254630 272500 332120 271900 329660 318540 325340 397210 493710 507940 635400 640570 550040 381130 701990 719400 788960 310740 233820 282540 328910 284240 333380 321010 337250 405130 494090 522240 635500 637600 578260 412570 706790 685530 748180 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 780670000 7676 630 7261 14540;14541;14542 11683;11684;11685;11686 11684 4 9606 Homo sapiens 0.02749268495404067 ETEQLEIK Unmodified 988.50769 0.50769094 4409 Q9BPX3;H0Y9Z8 NCAPG Condensin complex subunit 3 yes no 0 0 0 2 0 1 46.207 46.286 2 0.0011028 12738 20230619_1881_Aki_TMTPro18x_K_F2 163.15 102.47 83112 56244 67378 74402 83426 96866 79055 75547 106830 103510 117650 110230 126550 95924 92060 106980 125900 119870 76648 51680 70039 73905 85399 95739 80815 79399 107690 103360 120480 111120 127180 100080 96162 108010 120090 113740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79775000 7677 4409 7262 14543 11687 11687 1 9606 Homo sapiens 0.012977401068155814 ETESQLLPDVGAIVTCK Unmodified 1858.9346 0.93462914 2196 R4GMQ7;B1AMU7;B1AMU4;Q9Y3B2;R4GNH9 EXOSC1 Exosome complex component CSL4 yes no 0 0 0 5 0 1 62.459 62.506 3 0.048255 18993 20230619_1885_Aki_TMTPro18x_K_F5 43.37 24.295 183720 128160 131520 136860 135640 176300 139430 137120 219010 146940 113640 144160 115530 125380 157210 171480 146950 151170 169320 117500 138050 138050 141190 174370 142740 143050 214270 148110 121920 145770 120090 132240 158640 170410 140730 143790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238010000 7678 2196 7263 14544 11688 11688 1 9606 Homo sapiens 0.0395192068972392 ETETVFVPVIQAGMEALK Unmodified 1961.018 0.017964835 49 G5EA31;A0A024QZM6;P53992;B4DSN3 SEC24C Protein transport protein Sec24C yes no 0 0 0 8 0 1 65.27 65.289 3 4.4801E-08 20057 20230619_1888_Aki_TMTPro18x_K_F8 120.9 98.425 28491 27833 33591 34834 28844 33821 35919 35212 40523 40588 35213 37362 40426 30866 37721 43145 43317 46039 26415 25524 33639 34595 30528 34306 35953 36025 40831 40628 36627 37849 40951 32730 38744 43300 41410 43688 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48540000 7679 49 7264 14545 11689 11689 1 9606 Homo sapiens 0.07589657137600625 ETEVGDPAGNELAEPEAK Unmodified 1854.8483 0.84831655 2324 B2RDV7;Q96G46;Q96G46-2;K7EJX8;B4DLK3 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)];tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes no 0 0 0 1.5 0.5 1 1 48.489 48.489 3 2.0942E-09 13740 20230619_1880_Aki_TMTPro18x_K_F1 124.84 88.552 48511 39499 41328 48372 36999 52026 54758 53228 59657 58962 58509 56716 65604 52086 54415 72341 55177 62832 44801 36238 42581 48168 39353 52329 54323 54448 60453 59214 60377 57559 66170 54958 55677 71784 52839 59751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76126000 7680 2324 7265 14546;14547 11690;11691 11690 2 9606 Homo sapiens -0.04491367611262831 ETEWLFGMDEGRK Unmodified 1596.7242 0.72424243 2358 B3KNM8;B4E2X3;C4B4C6;B3KNI0;Q8N6R0-1;Q8N6R0-3;Q8N6R0-4;Q8N6R0 feat;METTL13 Methyltransferase-like protein 13 yes no 0 0 1 5 0 1 57.166 57.225 3 0.028745 16771 20230619_1885_Aki_TMTPro18x_K_F5 54.898 25.922 51540 43345 43717 58953 45540 51027 52429 54234 55441 54744 55440 54206 60141 53109 56350 65561 60971 62032 47606 39805 45181 58121 47364 52264 52566 55215 56321 55281 57088 55047 61068 55467 57674 65460 58299 58951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17364000 7681 2358 7266 14548 11692 11692 1 9606 Homo sapiens -0.05025072121793528 ETFDPEK Unmodified 864.38651 0.38651317 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 2 0 1 43.89 43.973 2 0.050284 11688 20230619_1881_Aki_TMTPro18x_K_F2 86.095 49.9 145100 84808 109410 134220 122680 191650 120140 144960 292570 178580 191650 261890 267050 230400 118210 235450 341340 309240 133660 78147 114520 132090 127250 188140 126530 152150 283950 181560 204850 260790 263420 239010 135740 240290 324220 293060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108750000 7682 3647 7267 14549 11693 11693 1 9606 Homo sapiens -0.051104625358448175 ETFEDSNLIPK Unmodified 1291.6296 0.62959699 3409 P08243-2;P08243;P08243-3;B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 4 0 1 55.096 55.108 3 0.00020429 16283 20230619_1883_Aki_TMTPro18x_K_F4 94.616 72.083 71453 63767 71395 58323 74452 76804 73504 71467 94476 72469 65657 76000 70733 62612 86340 91220 78069 85773 66107 58335 72486 59674 77058 76202 74809 73392 93883 73340 69056 76543 72802 66518 87097 90885 74829 81497 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68995000 7683 3409 7268 14550 11694 11694 1 9606 Homo sapiens -0.004552626014856287 ETFGEMSDGDVQEQLR Oxidation (M) 1855.7894 0.78942146 1537 A0A481SVA1;P84157;A0A481SVJ4;A0A481SVD9;A0A481SU50;A0A481SVT9 MXRA7 Matrix-remodeling-associated protein 7 yes no 0 1 0 1 0 1 46.583 46.583 3 3.2155E-11 12965 20230619_1880_Aki_TMTPro18x_K_F1 153.94 140.19 40319 31649 36950 43107 37715 45438 49745 46356 63315 56532 60027 61796 76492 55519 56606 65595 75940 72629 37246 29072 37878 42610 39492 45774 49855 47577 63588 56769 62453 62285 76554 58066 59021 66120 72449 68921 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146230000 7684 1537 7269 14551 11695 11695 1014 1 9606 Homo sapiens -0.10424167177234267 ETFGEMSDGDVQEQLR Unmodified 1839.7945 0.79450684 1537 A0A481SVA1;P84157;A0A481SVJ4;A0A481SVD9;A0A481SU50;A0A481SVT9 MXRA7 Matrix-remodeling-associated protein 7 yes no 0 0 0 1 0 1 51.826 51.826 2 1.2826E-18 15107 20230619_1880_Aki_TMTPro18x_K_F1 196.38 161.49 19755 14901 13878 16481 9197.4 15241 16746 18060 23044 29944 31779 42824 35636 35311 25473 38712 37470 45200 18213 13662 14540 16505 10193 15564 16650 18574 23488 30001 32422 42593 35807 36828 26820 39170 35788 42834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17031000 7685 1537 7269 14552 11696 11696 1 9606 Homo sapiens -0.09179863314625436 ETFGVNNAVYGIDAMNPSSR Oxidation (M) 2156.9797 0.97968185 355 A0A024R5S5;O75822;O75822-3;H0YGJ7 EIF3S1;EIF3J Eukaryotic translation initiation factor 3 subunit J yes no 0 1 0 6 0 1 54.287 54.364 3 2.5188E-05 15756 20230619_1886_Aki_TMTPro18x_K_F6 90.017 82.025 58791 49878 55732 60454 54860 66325 66308 59023 67334 68717 83361 76385 83232 64108 75680 90145 77749 94832 54352 45748 56897 60258 57398 66447 66227 61094 69159 69162 84721 76853 84534 67947 77293 90377 74488 89959 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 282180000 7686 355 7270 14553 11697;11698 11698 213 2 9606 Homo sapiens -0.0525288051503594 ETFGVNNAVYGIDAMNPSSR Unmodified 2140.9848 0.98476723 355 A0A024R5S5;O75822;O75822-3;H0YGJ7 EIF3S1;EIF3J Eukaryotic translation initiation factor 3 subunit J yes no 0 0 0 6.5 0.5 1 1 59.516 59.57 3 2.5806E-13 17608 20230619_1887_Aki_TMTPro18x_K_F7 101.89 89.621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7687 355 7270 14554;14555 11699;11700 11700 2 9606 Homo sapiens -0.04008576652404372 ETFGVNNAVYGIDAMNPSSRDDFTEFGK Unmodified 3080.3822 0.38217943 355 A0A024R5S5;O75822;O75822-3;H0YGJ7 EIF3S1;EIF3J Eukaryotic translation initiation factor 3 subunit J yes no 0 0 1 6 0 1 62.127 62.178 4 0.0083016 19089 20230619_1886_Aki_TMTPro18x_K_F6 62.377 53.643 29079 25787 29216 29043 28831 33227 30051 29041 31323 30273 37847 32564 34527 33759 37231 39662 31621 42794 26903 23631 29660 29126 30018 33190 30283 29996 32085 30610 38353 33038 35490 35081 37521 39929 30386 40572 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39957000 7688 355 7271 14556 11701 11701 1 9606 Homo sapiens -0.07479636814014157 ETFLTSPEELYR Unmodified 1483.7195 0.71947463 3356 O95433;O95433-2;G3V438;H0YJG7;H0YJ63 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 4 0.816 1 1 1 57.955 57.986 2 4.5691E-31 17438 20230619_1883_Aki_TMTPro18x_K_F4 271.74 225.58 209570 185070 196840 221920 210110 235450 214260 222510 299930 277140 241100 223210 269770 223210 238100 315490 249610 263250 193790 169700 201360 221260 217520 236790 218440 229620 298460 275640 251240 229190 272910 235130 243750 312400 238810 250540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 649530000 7689 3356 7272 14557;14558;14559 11702;11703;11704 11703 3 9606 Homo sapiens -0.0030363299288183043 ETGEHLVHVK Unmodified 1147.5986 0.59857163 3484 P21333;P21333-2;Q60FE5;Q60FE6;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5 FLNA;FLJ00119 Filamin-A yes no 0 0 0 4.83 1.34 1 2 1 1 1 35.207 35.269 3;4 1.6394E-10 7632 20230619_1885_Aki_TMTPro18x_K_F5 187.97 159.79 199860 141680 175800 199160 295380 299060 262830 257940 322910 244470 290170 292300 263350 231490 259870 270220 308860 285350 184460 130240 182520 197600 296400 293870 268590 265920 324000 249410 298090 292550 269580 242790 267060 271760 294880 270950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 825560000 7690 3484 7273 14560;14561;14562;14563;14564;14565 11705;11706;11707 11707 3 9606 Homo sapiens 0.030676288749418745 ETGENVLHVR Unmodified 1152.5887 0.58873523 1643 A0A7I2SU25;Q6QNY7;Q6QNY6;Q6QNY5;Q9Y223-5;Q9Y223-3;Q9Y223;Q9Y223-2;Q9Y223-4 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes no 0 0 0 3 0.816 1 1 1 36.166 36.219 3 1.1569E-26 8041 20230619_1882_Aki_TMTPro18x_K_F3 237.51 170.47 50635 33821 46238 47126 47048 54104 53401 55758 60229 50860 59316 60458 62771 55760 59779 55761 66401 63761 46734 31097 47358 46588 49007 54197 53698 56709 60898 51969 61067 60785 63833 57669 61180 56504 63450 60485 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139260000 7691 1643 7274 14566;14567;14568 11708 11708 1 9606 Homo sapiens 0.01854440869578866 ETGEPYR Unmodified 850.3821 0.38209649 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;A0A6Q8PFB2;C9JSU8;C9JWW9;C9J556;C9JWH7;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;C9J2Z7;C9K073 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 1 0 1 30.935 30.935 2 0.068786 6352 20230619_1880_Aki_TMTPro18x_K_F1 77.741 31.077 14624 8770.7 16185 20020 29760 33289 25256 30330 26354 14611 24916 29538 21129 20984 28161 9342.9 30519 25771 13511 8126.6 16544 19437 29712 32553 25761 30749 26678 16072 25515 28991 22041 21311 28532 10561 29145 24321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11869000 7692 1676;2901 7275 14569 11709 11709 1 9606 Homo sapiens -0.04907926958765074 ETGERPSNEEIMR Oxidation (M) 1562.6995 0.69948424 2831 D3DVQ1;O95202 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes no 0 1 1 1.5 0.5 1 1 29.576 29.61 3 0.0032558 5850 20230619_1880_Aki_TMTPro18x_K_F1 73.502 53.231 30240 22535 27586 33319 39471 39779 42508 38992 47027 39122 47202 45776 40919 40305 39205 41636 47465 47210 27926 20724 28462 32828 40114 39712 42798 39900 47619 39750 48136 45990 41925 41805 40366 42129 45333 44782 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 51696000 7693 2831 7276 14570;14571 11710 11710 1694 1 9606 Homo sapiens -0.05935751995184546 ETGERPSNEEIMR Unmodified 1546.7046 0.70456962 2831 D3DVQ1;O95202 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes no 0 0 1 1.5 0.5 1 1 33.207 33.236 3 1.0193E-10 7260 20230619_1880_Aki_TMTPro18x_K_F1 173.68 151.8 38562 31931 43941 47033 58922 69863 55458 61211 69424 57436 67567 68918 67073 53666 60085 61740 76362 72904 35701 29352 44445 46529 59967 68674 56553 62993 69821 58617 69390 68927 68133 56314 62125 62534 72881 69139 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65954000 7694 2831 7276 14572;14573 11711;11712 11712 2 9606 Homo sapiens -0.04691448132552978 ETGFSHSQITR Unmodified 1261.6051 0.60511357 585 A0A024R9M9;Q99653;H0YKE7;F5GX29;B4DSB5;H0YNG9 CHP;CHP1 Calcineurin B homologous protein 1 yes no 0 0 0 5.5 0.5 1 1 33.011 33.073 3 7.319299999999999E-32 6894 20230619_1886_Aki_TMTPro18x_K_F6 246.56 168.22 76117 62896 76663 77473 78181 75802 83574 81288 103030 85983 94693 90800 96757 78418 80544 99620 109580 92787 70392 57703 77846 77043 81170 76940 84557 82809 103470 86820 97590 91584 97924 82423 83887 99333 104450 88263 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 161260000 7695 585 7277 14574;14575 11713;11714 11714 2 9606 Homo sapiens -0.015224779643403963 ETGGFSQEELLK Unmodified 1336.6511 0.65106071 3896 Q14684;Q6PJM8 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 0 3.5 0.5 1 1 53.162 53.201 3 4.0825E-07 15458 20230619_1883_Aki_TMTPro18x_K_F4 128.85 90.826 187950 147550 166610 190380 186680 209070 204780 211870 269470 184900 203840 184040 220430 167210 183750 230990 220520 234450 173590 135460 171480 188970 192980 210020 207370 215510 267960 188450 212770 186530 222640 176530 189790 231130 210730 222590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142650000 7696 3896 7278 14576;14577 11715;11716 11716 2 9606 Homo sapiens -0.0037987757275459444 ETGGILGEGTPK Unmodified 1157.5928 0.59281755 84 Q96S66;A0A6Q8PG75;Q96S66-2;A0A6Q8PEZ7;A0A024R0G0;A0A6Q8PHQ1;A0A6Q8PG30;A0A024R095;A0A6Q8PGA4;Q96S66-4;Q96S66-3;A0A8I5KRC0;A0A6Q8PG14;Q5T1P5;A0A6Q8PFF7 CLCC1 Chloride channel CLIC-like protein 1 yes no 0 0 0 4 0 1 47.224 47.266 3 0.0013726 12735 20230619_1883_Aki_TMTPro18x_K_F4 84.352 58.966 89020 64679 74020 77238 82707 96210 86978 84570 99163 87061 100950 107860 103000 90133 97030 106200 109490 112970 82142 59351 76595 77223 85425 95572 87828 87278 100360 88514 103630 107960 104800 94391 99511 106820 104660 107210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47204000 7697 84 7279 14578 11717 11717 1 9606 Homo sapiens 0.02032485572613041 ETGNHYAMK Oxidation (M) 1065.4549 0.45494386 456 A8K8B9;A0A024R7J0;A0A8V8TL59;P17612-2;P17612;A0A7I2V5J4;K7ERP6;Q15136;K7EMV1;A0A7I2YQ82;B7Z708 PRKACA;KIN27 cAMP-dependent protein kinase catalytic subunit alpha yes no 0 1 0 4.5 0.5 1 1 30.738 30.816 3 0.01617 5956 20230619_1885_Aki_TMTPro18x_K_F5 63.216 54.327 10284 4558.2 10919 12319 15262 17715 11910 17793 14131 11139 13508 19233 15320 12811 13883 6061.2 20279 16814 9487.4 4245.3 11112 11857 15428 17482 12287 17975 14242 11854 14007 18903 15515 13082 14448 6828.9 19317 15868 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12277000 7698 456 7280 14579;14580 11718;11719 11719 281 2 9606 Homo sapiens -0.07516541227664675 ETGSISAPSECFR Unmodified 1439.6351 0.63509307 4697 Q9UQR0 SCML2 Sex comb on midleg-like protein 2 yes yes 0 0 0 4 0 1 43.981 44.025 2 0.00036469 11287 20230619_1883_Aki_TMTPro18x_K_F4 127.51 98.771 26835 23877 31098 32928 27201 26525 29227 30005 35062 38467 34682 31493 38167 32709 31577 44210 41052 42206 24860 21926 31181 32425 28584 27397 29550 30644 35406 38207 35727 32352 38543 34314 32819 44089 39195 40104 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16215000 7699 4697 7281 14581 11720 11720 1 9606 Homo sapiens -0.06713907081325488 ETGTEHSPGVQPADVK Unmodified 1650.7849 0.78492843 2940 E9PNP3;Q9H7C9;E9PJP1;E9PLK9;K4DI89;Q9H7C9-3;Q9H7C9-2 AAMDC Mth938 domain-containing protein yes no 0 0 0 3.33 0.471 2 1 37.44 37.491 3;4 8.9093E-06 8552 20230619_1883_Aki_TMTPro18x_K_F4 116.58 101.89 46202 35173 44291 44442 51124 56997 48428 41572 59722 53638 56388 53142 58336 52956 55512 55423 68146 59329 42689 32287 45253 44273 52517 56331 49322 43877 60066 53592 58077 53969 59381 54758 57188 55881 65018 56342 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 223830000 7700 2940 7282 14582;14583;14584 11721;11722 11722 2 9606 Homo sapiens -0.014432635378625491 ETGVDLTK Unmodified 861.44436 0.4443624 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;Q2F839 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 3.5 0.5 1 1 44.541 44.6 2 0.018161 11528 20230619_1883_Aki_TMTPro18x_K_F4 90.657 33.479 89938 73772 124290 97721 162890 149540 154800 129520 127310 121450 147340 114290 108460 95743 179380 70303 108540 91110 83427 67733 123810 97431 165480 146880 155670 133490 132010 122960 148470 115730 115220 98059 176640 72605 104420 86380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 426010000 7701 1488 7283 14585;14586 11723 11723 1 9606 Homo sapiens 0.008097993895717082 ETGVPIAGR Unmodified 898.48723 0.48723027 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TKR5;A0A8V8TKS0;A0A8V8TL46;A0A8V8TMA9 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 4 0.816 1 1 1 37.941 38.003 2 0.0027854 8690 20230619_1885_Aki_TMTPro18x_K_F5 121.85 92.276 161490 105670 132520 142760 154860 170340 144050 156210 202060 183010 220300 212470 216640 197580 182330 196270 255730 233890 148920 97136 137410 141460 158980 169810 147710 161240 203210 184500 224890 213870 219750 204210 190120 199340 243820 221830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 786660000 7702 2973 7284 14587;14588;14589 11724 11724 1 9606 Homo sapiens 0.033926142376685675 ETGYPLAVK Unmodified 976.52295 0.52294707 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 6 0 1 49.12 49.198 2 1.4773E-06 13546 20230619_1886_Aki_TMTPro18x_K_F6 137 88.207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7703 1213 7285 14590 11725 11725 1 9606 Homo sapiens 0.03374651694662134 ETGYVVERPSTTK Unmodified 1465.7413 0.7412727 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 1 5.5 0.5 1 1 39.188 39.278 3 4.7435E-06 9237 20230619_1886_Aki_TMTPro18x_K_F6 132.08 88.09 823730 633980 691500 827690 954810 1041800 962160 897540 1113800 1119800 1282700 1252500 1241700 1006000 986570 1278300 1388400 1272400 760380 582140 718320 822370 971500 1033900 974090 932930 1132800 1123900 1305700 1257400 1256400 1060400 1031400 1279000 1323700 1209000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 718490000 7704 4629 7286 14591;14592 11726;11727 11727 2 9606 Homo sapiens 0.0270317175566106 ETHADLWPAK Unmodified 1166.572 0.57202253 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258 COPB2 Coatomer subunit beta' yes no 0 0 0 4.5 0.5 1 1 45.267 45.328 3 0.0032731 11774 20230619_1885_Aki_TMTPro18x_K_F5 68.626 51.6 286430 190390 372980 356680 423880 465420 388050 468710 468050 346410 478670 505980 446150 371170 429530 300200 511600 537710 265200 175740 372350 347770 435150 462090 396130 475080 472170 361540 489370 501620 455560 383880 440850 316530 488890 508110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 431290000 7705 3031 7287 14593;14594 11728 11728 1 9606 Homo sapiens -0.004600600163939816 ETHEALAR Unmodified 925.46174 0.4617438 1944 A4D218;Q9Y6D9;Q9Y6D9-4;Q9Y6D9-3 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes no 0 0 0 1 0 1 25.797 25.797 3 0.0026747 4447 20230619_1880_Aki_TMTPro18x_K_F1 91.853 50.866 2605.6 798.99 2134.4 2679.1 2608.7 3249.8 2999.9 3508.8 2266.7 1795.5 2700.2 4179.8 2060.4 3283.7 3341.1 1508.4 2352.3 3155.3 2396.3 750.3 2218.7 2554.3 2684.4 3242.8 2980.9 3520.5 2364.5 1977.5 2735.5 4097.8 2192.9 3316 3310.4 1643.7 2265.8 2976.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 820700 7706 1944 7288 14595 11729 11729 1 9606 Homo sapiens -0.003968602847749025 ETHFPFAIR Unmodified 1116.5716 0.5716286 2332 B2RWN5;Q5T3Q7;Q9H583;A2VDI1 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 4.5 3.5 1 1 48.319 48.352 3 0.00050978 12845 20230619_1888_Aki_TMTPro18x_K_F8 93.267 67.83 54406 49958 60328 64038 66332 68001 69810 76399 77742 68486 67595 67452 82197 65022 65917 88967 91925 73315 50392 45834 60901 63576 68460 68659 70448 77231 78353 69611 70461 68502 82658 68418 68868 88076 87573 69869 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94352000 7707 2332 7289 14596;14597 11730;11731 11731 2 9606 Homo sapiens 0.018005650544182572 ETHMMGNEEETEFHGLR Oxidation (M) 2061.852 0.85203849 1610 A0A6M8YHF9;A0A6M8YDW2;A0A6M8YDW1;Q8IUF8-4;Q8IUF8;Q8IUF8-3 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA yes no 0 1 0 1.5 0.5 1 1 37.443 37.473 4 5.454E-18 8964 20230619_1880_Aki_TMTPro18x_K_F1 170.48 161.23 17340 9160.4 16681 15160 18144 21186 22295 24508 27973 19588 22886 23753 26934 19512 21523 24303 26820 23347 15993 8450.6 17018 14897 18859 21025 22411 24659 27942 20195 23898 23792 27088 20530 22287 24285 25586 22198 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170290000 7708 1610 7290 14598;14599 11732 11732 1050 1 9606 Homo sapiens -0.1364134438072142 ETHSLFFR Unmodified 1035.5138 0.51377937 619 A0A0C4DGS1;A0A024RAD5;P39656;P39656-3;U3KQ84;P39656-2 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 0 6.5 1.12 1 1 1 1 42.684 42.748 3 1.3776E-05 10596 20230619_1888_Aki_TMTPro18x_K_F8 166.68 111 431580 334070 376250 368970 458150 476890 472770 439130 640730 260210 280030 260980 290530 238660 359830 291020 300300 288370 398510 306250 387990 371320 469990 473290 480580 446500 627590 273410 304790 264470 299550 249740 361000 291690 287820 273970 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 904090000 7709 619 7291 14600;14601;14602;14603 11733;11734 11734 2 9606 Homo sapiens -0.002556968710223373 ETHVMDYR Oxidation (M) 1065.4549 0.45494386 892 Q86SZ7;Q2TNB3;A0A087X1Z3;Q9UL46;H0YM70;Q6FHK9 PSME2 Proteasome activator complex subunit 2 yes no 0 1 0 2.5 0.5 1 1 28.54 28.632 3 0.00059601 5252 20230619_1881_Aki_TMTPro18x_K_F2 121.85 56.693 36699 17076 32307 32513 48745 39255 40622 42688 59030 37629 56084 51495 47835 45662 48673 44299 57171 56121 33810 15797 33413 31639 49042 39271 41990 43229 58878 38764 57283 51481 49164 47208 49923 45218 54612 53182 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90880000 7710 892 7292 14604;14605 11735 11735 508 1 9606 Homo sapiens -0.07516541227664675 ETHVMDYR Unmodified 1049.46 0.46002924 892 Q86SZ7;Q2TNB3;A0A087X1Z3;Q9UL46;H0YM70;Q6FHK9 PSME2 Proteasome activator complex subunit 2 yes no 0 0 0 2.5 0.5 1 1 33.763 33.825 3 0.00018374 7181 20230619_1881_Aki_TMTPro18x_K_F2 143.73 73.209 107600 84779 102180 93804 117310 121580 124070 124630 166540 130930 155180 159010 142960 130940 146180 141340 176050 167340 99431 77714 104420 94424 120860 120940 126000 127240 166650 132910 159250 159180 146550 136520 150200 143340 168090 158700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 141010000 7711 892 7292 14606;14607 11736;11737 11736 2 9606 Homo sapiens -0.06272237365033106 ETIDAVPNAIPGR Unmodified 1351.7096 0.70957864 3148 J3QRS9;Q59G94;X6R4W8;O43670-2;O43670;O43670-4;J3QS27;J3KTL1;J3KRB6;J3KRW6;H0Y3M2 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes no 0 0 0 4.5 0.5 1 1 49.067 49.124 3 0.001215 13576 20230619_1883_Aki_TMTPro18x_K_F4 82.543 54.954 75309 54206 58502 79834 79154 95688 76815 83502 119550 88382 94686 93100 93509 77889 81170 99078 85521 95541 69455 49855 61277 78651 80716 95221 78874 86258 118290 89283 98224 93809 94885 81967 83103 98975 81853 90746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175070000 7712 3148 7293 14608;14609 11738 11738 1 9606 Homo sapiens 0.04779223792343146 ETIDNNSVSSPLQSLQQR Unmodified 2014.992 0.99196109 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;A0A7I2V3I2;H0YBP5;A0A7I2V4G3;E5RGA2;A0A7I2V5P9;E5RHS5 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 0 5 0 1 51.907 51.981 2 3.2047E-23 14639 20230619_1885_Aki_TMTPro18x_K_F5 246.25 214.41 18099 11571 13550 14936 13513 15920 14593 16517 21438 20608 21646 19571 21439 19085 14685 26543 19979 20873 16678 10633 14150 14820 14102 16034 14868 16934 21459 20581 22162 19920 21576 20085 15412 26201 19070 19882 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19523000 7713 1659 7294 14610 11739 11739 1 9606 Homo sapiens 0.025064792196644703 ETIELVHTEPTDVAQLPSR Unmodified 2134.0906 0.090612506 1652 D6RG15;A0A7I2V2U8;A0A7I2V5D3;Q6IBS0;A0A7I2V5B1;B4E0A1;H0Y858 TWF2 Twinfilin-2 yes no 0 0 0 3.5 0.5 1 1 51.431 51.477 3 3.8683000000000003E-31 14825 20230619_1882_Aki_TMTPro18x_K_F3 225.11 210.27 182010 146350 172140 182010 187080 209240 197870 187090 229040 214290 219420 214680 257190 210790 217140 264490 229530 251580 168200 134290 175970 181230 193510 209010 199830 193420 231230 215210 227180 217910 259340 220430 222460 264060 219650 239010 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 461430000 7714 1652 7295 14611;14612 11740;11741;11742 11740 3 9606 Homo sapiens 0.06893082464694089 ETIEQEK Unmodified 875.42363 0.42362696 1918;3744 A2VCK8;P62328;CON__P21752;Q0P5T0;Q0P5U7;Q0P5Q0;Q0P5P4;Q0P5N8;D6W5K2;P63313 TMSB4X;TMSB10 Thymosin beta-4;Hematopoietic system regulatory peptide;Thymosin beta-10 no no 0 0 0 1.8 0.748 2 2 1 38.226 38.262 2;3 0.0012814 9286 20230619_1880_Aki_TMTPro18x_K_F1 180.18 87.711 + 345990 150540 452440 488960 1106400 971360 682370 950350 778040 313700 597330 672410 367160 483900 578150 208120 650020 569740 319810 140840 460540 471530 1084000 944690 715760 954060 778410 362460 612160 659710 393400 490250 586030 235140 620680 537600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 834170000 7715 1918;3744 7296 14613;14614;14615;14616;14617 11743;11744;11745 11743 3 9606 Homo sapiens -0.01906790990085483 ETIMNQEK Oxidation (M) 1007.4594 0.45936054 3480 P20290;P20290-2;A0A7I2YQL2;A0A7I2V3T6;D6RDG3;A0A3G0TEJ7 BTF3 Transcription factor BTF3 yes no 0 1 0 2.5 0.5 1 1 36.037 36.092 2 0.009117 8018 20230619_1882_Aki_TMTPro18x_K_F3 96.19 38.023 43046 25132 52129 54572 64222 68800 59638 61363 81027 54680 69965 62506 63162 55501 59167 39155 80944 65731 39802 23269 52395 52818 65622 68266 61053 63016 80787 55920 71945 62849 64526 56652 61313 41170 77131 62205 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39355000 7716 3480 7297 14618;14619 11746;11747 11747 2126 2 9606 Homo sapiens -0.04407076804727694 ETIPDIDPNAK Unmodified 1211.6034 0.60338224 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 3.5 0.5 1 1 51.303 51.331 3 3.5246E-07 14765 20230619_1882_Aki_TMTPro18x_K_F3 136.49 120.26 58222 49170 58673 60568 67056 77740 69785 64849 87584 74235 71107 74071 78784 60591 71524 85024 83253 80421 53850 45106 59711 60449 69114 77003 70728 67395 87551 74557 74086 74753 79798 64263 73578 84747 79522 76443 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49772000 7717 3647 7298 14620;14621 11748;11749 11748 2 9606 Homo sapiens 0.006044682270385238 ETIPLQETSLYTQDR Unmodified 1792.8843 0.88430813 1335 A0A2C9F2P4;A0A286YFF7;P50897;P50897-2;E9PIA8;E9PSE5 PPT1 Palmitoyl-protein thioesterase 1 yes no 0 0 0 3.33 0.471 2 1 53.737 53.779 2;3 1.2972999999999999E-19 15850 20230619_1882_Aki_TMTPro18x_K_F3 179.56 166.37 164520 135670 134440 188350 211400 222190 165750 210410 231600 195940 183230 198790 193490 169960 215190 225290 206330 240210 151900 124620 140520 186180 212390 221810 171840 215240 230330 198940 190890 200720 198250 179210 218020 226300 197740 227870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 238740000 7718 1335 7299 14622;14623;14624 11750;11751 11750 2 9606 Homo sapiens 0.01958134356254959 ETITAPVPFDFTHK Unmodified 1601.809 0.80895834 2867;2868 E5KND5;Q96RP9;Q96RP9-2;C9IZ01;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 0 7.5 0.5 1 1 58.233 58.283 3 3.8792E-22 17081 20230619_1888_Aki_TMTPro18x_K_F8 224.42 197.64 151120 126460 127760 161780 143020 169700 166790 179210 210650 196910 182550 195500 244970 198210 176010 245370 222910 262600 139580 116060 132190 160540 148200 171170 168130 182850 211070 198060 191370 198680 244750 206970 183170 246550 213100 249090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 437270000 7719 2867;2868 7300 14625;14626 11752;11753 11753 2 9606 Homo sapiens 0.032126216864526214 ETITESAGR Unmodified 962.46689 0.46688876 1015 J3KTQ7;J3KS45;A0A0D9SEL8;B7Z591;Q9UM00-1;Q9UM00-2;Q9UM00 TMCO1 Transmembrane and coiled-coil domain-containing protein 1 yes no 0 0 0 2 0 1 33.497 33.555 2 1.7224E-05 7087 20230619_1881_Aki_TMTPro18x_K_F2 169.09 98.179 35518 20167 50777 62155 54929 67340 47505 67824 74643 43148 71582 78715 60951 63990 63963 31811 81953 83581 32896 18811 50445 59283 56594 67595 49231 68568 74225 46054 73165 77734 62785 64793 65796 35493 78249 78832 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52110000 7720 1015 7301 14627 11754 11754 1 9606 Homo sapiens -0.015846012128008624 ETKEEEEAERSER Unmodified 1620.7227 0.72272211 2891 E7EMW7;O95071-2;O95071;H0YAV7 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 0 0 2 1 0 1 30.594 30.594 4 3.7493E-05 6220 20230619_1880_Aki_TMTPro18x_K_F1 118.13 84.821 31593 26537 25789 29040 35287 31070 34308 33684 44032 42320 37728 37032 44632 35824 30147 44517 48836 40545 29174 24317 26834 29161 35842 31357 34933 34455 44082 42154 39283 37795 44654 37464 32016 44332 46488 38582 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28089000 7721 2891 7302 14628 11755 11755 1 9606 Homo sapiens -0.0628103467688561 ETKPEPMEEDLPENKK Oxidation (M) 1928.9037 0.90372294 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;F5H783 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 1 2 3.5 0.5 1 1 41.551 41.604 5 2.8122E-06 10234 20230619_1883_Aki_TMTPro18x_K_F4 116.06 94.861 96009 80551 85093 100610 98101 101650 98454 95036 109050 117580 141980 136100 132920 110780 123840 143920 135530 136500 88707 73906 87626 99947 100860 102590 99603 98188 111820 118160 143680 136530 135490 116840 126850 143620 129560 129720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172390000 7722 2088 7303 14629;14630 11756 11756 1314 1 9606 Homo sapiens -0.02357277415194403 ETLAQLQQEFQR Unmodified 1489.7525 0.75250609 3236 Q5STK2;O15212 PFDN6 Prefoldin subunit 6 yes no 0 0 0 6 0 1 57.899 57.967 3 1.8947E-08 17271 20230619_1886_Aki_TMTPro18x_K_F6 126.34 107.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7723 3236 7304 14631 11757 11757 1 9606 Homo sapiens 0.027219938497637486 ETLCTIDGLHFNSTYNAR Unmodified 2110.9742 0.97420254 2992 F8W8C1;Q6ZTA4;Q6ZTA4-2 TRIM67 Tripartite motif-containing protein 67 yes no 0 0 0 7 0 1 53.035 53.105 3 0.028365 14961 20230619_1887_Aki_TMTPro18x_K_F7 55.688 45.767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7724 2992 7305 14632 11758 11758 1 9606 Homo sapiens -0.03684559306839219 ETLDHKPR Unmodified 994.51959 0.51959303 4269 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B yes yes 0 0 1 5 0 1 30.969 31.047 4 0.0015886 6051 20230619_1885_Aki_TMTPro18x_K_F5 128.69 107.82 279360 140930 356790 369940 527520 508730 423640 489790 530790 326750 526390 539700 431240 386610 467670 188680 493260 457330 258290 131070 358560 356140 531000 503100 436610 497120 533560 345660 536250 532610 444950 393540 474720 208820 471450 431660 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 28196000 7725 4269 7306 14633 11759;11760;11761;11762;11763;11764;11765 11761 7 9606 Homo sapiens 0.022114016406590054 ETLFNTLANNR Unmodified 1291.6521 0.65206377 511 A0A8Q3SHZ4;A0A494C1F2;A0A024R8B6;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A8Q3WLX1;Q7Z3C4 NUP214;DKFZp686J0330 Nuclear pore complex protein Nup214 yes no 0 0 0 1 0 1 54.015 54.015 2 5.8197E-12 16022 20230619_1880_Aki_TMTPro18x_K_F1 204.34 180.81 47842 41638 43309 46136 48801 57880 50251 52823 59399 46449 48399 40793 41688 34979 50575 48008 46260 47600 44221 38154 44477 46388 50349 57518 50867 54124 59515 47136 49849 41516 43180 36972 51021 48018 44313 45210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29720000 7726 511 7307 14634 11766 11766 1 9606 Homo sapiens 0.017903815868066886 ETLIDVAR Unmodified 915.50255 0.50254598 765;2549 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2;B4DN39 CCT6A T-complex protein 1 subunit zeta no no 0 0 0 3 0 1 47.272 47.352 2 0.0021011 12937 20230619_1882_Aki_TMTPro18x_K_F3 132.08 79.401 457440 297950 384620 453250 409580 578040 486630 413550 633430 556160 591270 653680 626490 549870 541570 622400 594740 737740 421890 274270 397750 446160 426950 570770 490430 437940 635060 557810 610490 655370 634390 574520 555640 630500 569510 698960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 400350000 7727 765;2549 7308 14635 11767;11768 11767 2 9606 Homo sapiens 0.041414810348555875 ETLLNSATTSLNSK Unmodified 1477.7624 0.76240208 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 4.5 3.5 1 1 54.058 54.093 2;3 5.6666E-09 16039 20230619_1880_Aki_TMTPro18x_K_F1 161.21 131.2 494110 309770 450580 527930 476290 645110 546460 482170 648410 607300 629420 756580 699610 646640 602200 698600 659130 845360 455890 285620 462370 516160 495750 639070 549880 507510 654030 611900 650570 757050 707540 673300 617810 709120 631390 800690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 251070000 7728 3622 7309 14636;14637 11769;11770 11769 2 9606 Homo sapiens 0.04263137064526745 ETLPNVR Unmodified 827.45012 0.45011648 3782 Q658N3;Q53F47;Q01658 DKFZp666G145;DR1 Protein Dr1 yes no 0 0 0 4.5 0.5 1 1 38.865 38.908 2 0.020304 9100 20230619_1883_Aki_TMTPro18x_K_F4 104.76 81.24 173310 118450 156390 194110 232050 244140 218190 217250 279230 190210 217770 221980 224910 179810 197370 222160 253530 250610 159960 109120 161650 190280 234710 242360 222560 223070 278290 194830 226630 222550 228020 189190 204420 224080 242020 237740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136530000 7729 3782 7310 14638;14639 11771;11772 11771 2 9606 Homo sapiens 0.029489426918985373 ETLPSIWDSPTK Unmodified 1372.6874 0.68744622 1690 A0A7P0TA98;A0A7P0TAI2;A0A7P0T882;A0A7P0T850;A0A7P0T9X2;A0A7P0Z4I2;B4DR67;A0A7P0TAL2;A0A7P0T9C7;A0A7P0T901;A0A7P0TB27;A0A7P0T9B8;Q9HC03;Q9Y673-2;Q9Y673 ALG5 Dolichyl-phosphate beta-glucosyltransferase yes no 0 0 0 7 0 1 58.97 59.02 3 4.8103E-05 17406 20230619_1887_Aki_TMTPro18x_K_F7 117.98 96.742 44287 39615 43396 49534 39588 52558 46234 46313 55953 51230 52499 53367 49342 47525 54631 59381 54361 56189 40968 36339 44148 49237 41685 52752 46541 47887 56299 51593 53909 53893 50751 49811 55473 59293 52027 53396 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9366400 7730 1690 7311 14640 11773 11773 1 9606 Homo sapiens 0.016009993239322284 ETLQLESAAEVGFVR Unmodified 1647.8468 0.84680041 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;A0A2R8Y7S8;V9H068;V9H023;V9H0D5;V9H0B2;V9H015;V9H062;Q0ZAJ2 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 4 0 1 59.27 59.272 3 0.055561 18016 20230619_1883_Aki_TMTPro18x_K_F4 42.788 28.098 55950 44526 54966 52720 44568 63372 63903 51618 83497 65314 62264 69997 78152 71807 67173 86651 82405 115770 51719 40839 55775 52716 47776 62976 63872 53949 83059 65496 65628 70915 78804 74830 69459 88387 78928 109530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55850000 7731 3585 7312 14641 11774 11774 1 9606 Homo sapiens 0.04879087881226951 ETLQQHK Unmodified 882.45593 0.45593014 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;A0A7P0TBC2 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 4.5 0.5 1 1 31.866 31.936 3 0.0019266 6395 20230619_1885_Aki_TMTPro18x_K_F5 135.77 102.95 31055 13363 57878 54407 114240 83472 64197 116920 56556 25721 69096 81161 27079 46229 76115 18325 69069 62929 28836 12585 57328 51915 112420 82945 67550 114510 58406 32482 68631 78675 31450 47272 75822 21556 66111 59321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41583000 7732 3452 7313 14642;14643 11775 11775 1 9606 Homo sapiens 0.010000412035651607 ETLSSAAK Unmodified 805.41815 0.41814765 4548 Q9HC35;B5MBZ0;Q9HC35-2;B6EXY3;C1PHA1;J7MA22;C1PHA0;B3XZL9;B3XZM0;A9YLN7;I1X3U7 EML4;EML4-ALK variant 7;EML4-ALK;EML4-ALK variant 6;EML4/ALK fusion Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 0 5 0 1 38.704 38.795 2 3.3969E-06 9026 20230619_1885_Aki_TMTPro18x_K_F5 168.23 79.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7733 4548 7314 14644 11776 11776 1 9606 Homo sapiens 0.0076553021809786514 ETLTNCTEPLK Unmodified 1304.6282 0.62821678 1587 A0A5H1ZRP4;Q8WX92-2;Q8WX92 NELFB Negative elongation factor B yes no 0 0 0 4 0 1 46.901 46.943 3 4.9153E-05 12587 20230619_1883_Aki_TMTPro18x_K_F4 108.9 79.604 175180 133800 160060 174660 185310 193600 193550 199190 241920 213850 215640 218080 253440 202260 227970 258800 270520 233600 161800 122860 164310 173270 190730 194470 196150 203460 242670 215530 224160 220750 256230 212170 234760 257680 258170 222280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 493790000 7734 1587 7315 14645 11777 11777 1 9606 Homo sapiens -0.011912199619018793 ETLTQGLEFCR Unmodified 1352.6395 0.63945017 1440 B2R694;A0A384MTQ5;P48449-3;P48449;A0A0G2JQD0;P48449-2 LSS Terpene cyclase/mutase family member;Lanosterol synthase yes no 0 0 0 5 0 1 52.638 52.71 2 1.5462E-08 14884 20230619_1885_Aki_TMTPro18x_K_F5 177.57 153.6 70566 57463 61775 75241 57572 72141 74510 69489 89338 90850 87828 86603 97686 88304 88253 113140 103630 104740 65181 52754 63519 74459 60694 73101 74589 71772 90139 90566 90607 88212 98994 92317 90895 112750 99009 99568 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77982000 7735 1440 7316 14646 11778 11778 1 9606 Homo sapiens -0.022763978677630803 ETLVYLTHLDYVDTER Unmodified 1965.9684 0.96837211 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;A0A7I2YQX3;B3KWD0 XPO1 Exportin-1 yes no 0 0 0 4.5 0.5 1 1 60.427 60.454 3 3.5827000000000002E-34 18510 20230619_1883_Aki_TMTPro18x_K_F4 260.5 238.02 113530 103110 122880 120980 111530 114470 122360 117720 144330 136310 128790 133060 139980 132880 160170 159850 147250 169620 105120 94518 123850 120670 116960 116380 123450 120570 145200 136700 133470 135250 143570 138470 161810 160750 141170 160920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107710000 7736 3228 7317 14647;14648 11779;11780 11779 2 9606 Homo sapiens 0.024026654531098757 ETMVTSTTEPSR Oxidation (M) 1353.6082 0.60820962 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;A0A0S2Z4D8;A0A0S2Z4W7;A0A0C4DGP4 PRKCSH Glucosidase 2 subunit beta yes no 0 1 0 2 0 2 32.355 32.415 2;3 9.0419E-07 6631 20230619_1881_Aki_TMTPro18x_K_F2 145.09 123.21 32194 25744 43678 33691 52467 56045 51423 49756 64444 45245 59506 66122 51239 52337 52582 49270 64548 65909 29852 23636 43491 33678 53744 54825 52303 51131 64631 46642 60971 65685 52696 54247 54087 50509 61653 62419 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159360000 7737 444 7318 14649;14650 11781;11782 11782 276 2 9606 Homo sapiens -0.05445015692521338 ETMVTSTTEPSR Unmodified 1337.6133 0.613295 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;A0A0S2Z4D8;A0A0S2Z4W7;A0A0C4DGP4 PRKCSH Glucosidase 2 subunit beta yes no 0 0 0 2.5 0.5 1 1 37.45 37.507 2 5.5455000000000005E-31 8557 20230619_1882_Aki_TMTPro18x_K_F3 267.49 250.17 146720 98581 118680 133110 160640 188320 168200 166600 246770 184660 195240 213220 207560 189590 178080 216270 236010 231640 135300 90605 123640 132260 164040 185670 171460 172140 244710 186710 203360 214330 210220 197710 185000 217660 225220 219870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 304570000 7738 444 7318 14651;14652 11783;11784 11784 2 9606 Homo sapiens -0.042007118298897694 ETNISYSQEADDR Unmodified 1526.6485 0.64849453 3203 O00116;B7Z3Q4;A0A7P0T984;A0A1B0GWA2;A0A7P0TAL3;A0A2R8YEL0;Q53SG6;A0A7P0T9C9;A0A7P0TAU9;A0A7P0T8Q7;A0A7P0TA54;B7ZAC5 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes no 0 0 0 1 0 1 38.405 38.405 2 1.2796999999999999E-82 9383 20230619_1880_Aki_TMTPro18x_K_F1 366.15 310.69 34819 25840 26380 29038 31456 37800 33678 32726 43274 44456 53474 50802 52618 45985 48979 61590 67772 60397 32113 23696 27597 29180 32394 37442 34124 34094 43941 44502 54324 51164 53585 48407 50972 61534 64611 57405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65217000 7739 3203 7319 14653 11785 11785 1 9606 Homo sapiens -0.09376377768376187 ETNLDSLPLVDTHSK Unmodified 1667.8366 0.83662965 3414 P08670;V9HWE1;Q53HU8 VIM;HEL113 Vimentin yes no 0 0 0 3.57 1.59 1 1 1 2 1 1 51.839 51.884 3 6.3304E-20 14556 20230619_1885_Aki_TMTPro18x_K_F5 217.37 193.08 918380 782280 846230 817100 1389200 1656200 1221800 1258100 1522500 1469800 1437700 1463400 1572400 1327300 1374900 1672500 1456500 1602200 848870 716510 873940 833400 1397100 1601700 1250500 1317200 1531400 1474500 1485000 1481500 1591100 1391900 1407800 1670400 1393800 1522000 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 25848000000 7740 3414 7320 14654;14655;14656;14657;14658;14659;14660 11786;11787;11788;11789;11790;11791;11792 11789 7 9606 Homo sapiens 0.029424801560480773 ETNNAAIIMK Unmodified 1103.5645 0.56449431 3685 P60983;G3V4P8;Q59G69 GMFB Glia maturation factor beta yes no 0 0 0 6 0 1 47.421 47.501 2 0.00033158 12835 20230619_1886_Aki_TMTPro18x_K_F6 151.83 60.508 28689 24608 28789 32212 29984 32848 30730 31702 39858 38530 33416 37903 39832 26773 31401 42611 43508 37068 26537 22587 29273 31908 31082 33142 31226 32649 39856 38551 34890 38116 40018 28846 32806 42219 41467 35290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56489000 7741 3685 7321 14661 11793 11793 1 9606 Homo sapiens 0.016854643916758505 ETNPHHPPAWIASAR Unmodified 1682.8277 0.82773672 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 0 7.5 0.5 1 1 35.481 35.511 4 1.2795E-10 7499 20230619_1887_Aki_TMTPro18x_K_F7 159.34 128.27 19272 14715 19261 18824 24434 24469 23136 26149 29892 22237 23237 23531 25346 20612 21559 21849 28154 24908 17813 13510 19640 18752 24926 24355 23612 26476 29788 22733 24245 23730 25625 21433 22352 22109 26851 23637 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102640000 7742 3337 7322 14662;14663 11794 11794 1 9606 Homo sapiens 0.013635961009185849 ETPAATEAPSSTPK Unmodified 1385.6674 0.66743906 3759 P80723;P80723-2 BASP1 Brain acid soluble protein 1 yes no 0 0 0 2.5 0.5 1 1 38.882 38.942 3 5.0109E-07 9159 20230619_1882_Aki_TMTPro18x_K_F3 135.58 112.21 204120 125570 241640 196970 239700 227290 158040 146710 198140 188400 329620 318510 253140 248030 276010 150680 283290 299100 188730 115660 241890 193390 246640 225740 165640 156750 204590 192220 328580 314870 261980 253010 279960 161740 271090 282460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 705670000 7743 3759 7323 14664;14665 11795 11795 1 9606 Homo sapiens -0.009967964066845525 ETPALTINR Unmodified 1013.5506 0.55055881 2292 B2RB23;P42765;A0A0B4J2A4;B3KNP8;K7EME0;K7EJB1;K7EJ68;K7ER88 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 42.514 42.603 2 0.00069867 10593 20230619_1885_Aki_TMTPro18x_K_F5 135 118.8 240740 177990 211990 254020 319230 369230 320000 309170 442900 204790 236760 241770 227730 213780 252450 244570 277740 237280 222250 163620 219690 251600 323530 363050 326050 317190 435200 214240 252310 242970 234170 222930 257600 244930 265210 225590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 283110000 7744 2292 7324 14666;14667 11796;11797 11796 2 9606 Homo sapiens 0.04432554954905754 ETPDKVELSK Unmodified 1144.5976 0.59756858 674 B4DNL1;Q9BV37;Q53FW9;A0A024RBH5;Q13610;Q86X79;Q05BL3;Q6PKI5;Q6PIN4;Q13610-2 PWP1 Periodic tryptophan protein 1 homolog yes no 0 0 1 5 0 1 43.995 44.074 3 0.00077715 11245 20230619_1885_Aki_TMTPro18x_K_F5 98.105 71.564 165410 107690 136140 166770 169670 209780 163070 176790 268010 193280 204110 224220 258250 202460 157800 224310 299710 245730 152530 99153 141440 163980 173880 207960 167990 183290 264380 195620 214750 225440 257150 210820 170380 226060 285020 233370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77354000 7745 674 7325 14668 11798 11798 1 9606 Homo sapiens 0.031053697153765825 ETPEHPLK Unmodified 949.4869 0.48689592 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24;E5RHJ4 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 4 0.816 1 1 1 34.824 34.891 3 0.0030211 7517 20230619_1882_Aki_TMTPro18x_K_F3 98.033 64.236 231760 124680 263990 279650 383370 391750 309340 349760 390530 277000 389450 394570 363310 325990 332600 182990 419140 370330 214090 115550 267330 270820 386570 386400 318790 358130 392760 287620 398470 392600 370320 331110 342630 197230 399860 349930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 323640000 7746 2414 7326 14669;14670;14671 11799;11800 11799 2 9606 Homo sapiens 0.010131945178159185 ETPENLAK Unmodified 900.45526 0.45526144 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 3 0.816 1 1 1 41.5 41.553 2 0.0015637 10250 20230619_1882_Aki_TMTPro18x_K_F3 150.88 103.81 203650 113670 253710 266460 313420 353930 276820 316670 314700 248430 366360 408400 348580 322280 352730 173550 403980 388980 188320 105410 254540 257360 319800 350040 282600 324180 320170 259660 373000 403990 356680 327520 360390 189490 385930 367230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 226950000 7747 4414 7327 14672;14673;14674 11801;11802;11803 11802 3 9606 Homo sapiens 0.001052017638471625 ETPFELIEALLK Unmodified 1401.7755 0.77553294 3811 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 7.5 0.5 1 1 68.462 68.482 3 0.00079286 21502 20230619_1887_Aki_TMTPro18x_K_F7 90.653 64.523 11576 4375.3 6508.4 12016 10282 3981.5 8982.5 14171 7643.1 14803 14303 13325 11405 11840 8378.2 20118 16778 15395 10629 4081.2 7112.2 11390 10296 4875.2 9107.7 13778 8157.7 14850 14222 13562 11611 12683 9102.4 19782 15962 14677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3205400 7748 3811 7328 14675;14676 11804 11804 1 9606 Homo sapiens 0.09071619914561779 ETPLSNCER Unmodified 1104.487 0.48697227 1956 B4DXG8;A5PLM5;Q06265;Q06265-2;D6RAP4;D6R905;D6RA17 EXOSC9 Exosome complex component RRP45 yes no 0 0 0 2 0 1 35.054 35.11 2 1.1284E-05 7689 20230619_1881_Aki_TMTPro18x_K_F2 170.95 136.12 58734 35095 48993 51798 51056 60941 56447 55569 82214 64375 61454 69109 90352 65364 49518 77076 99568 85759 54143 32307 50633 51038 53124 60776 57376 57375 81453 64789 65286 69805 89344 68238 53972 77664 94686 81413 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80929000 7749 1956 7329 14677 11805 11805 1 9606 Homo sapiens -0.06109173544518853 ETPPPLVPPAAR Unmodified 1243.6925 0.69247202 93 A0A024R0H7;Q9BQA1;Q9BQA1-2;B4DJP0 WDR77 Methylosome protein 50 yes no 0 0 0 5.5 0.5 1 1 46.265 46.345 2 0.00062729 12285 20230619_1886_Aki_TMTPro18x_K_F6 124.95 85.932 112780 102460 115860 110420 112490 126160 129340 114060 138120 141730 144120 134300 166680 135480 129180 163030 150120 149260 104380 93846 117360 111130 117550 126150 129700 118140 140510 141560 148470 136790 167580 141190 133360 162530 143430 141920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235160000 7750 93 7330 14678;14679 11806 11806 1 9606 Homo sapiens 0.0803734797721063 ETQALILAPTR Unmodified 1211.6874 0.68738664 543 P38919;A0A024R8W0 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 0 6.5 0.5 1 1 49.201 49.282 2 0.00025558 13223 20230619_1887_Aki_TMTPro18x_K_F7 124.42 96.249 446850 332260 408040 424920 422770 497630 447160 474420 520970 386370 410870 355410 407540 342510 458990 444120 435880 374860 412660 305070 418080 422460 439050 497000 451800 483800 521760 394520 426390 362240 418500 359050 464450 440880 416850 357000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1155400000 7751 543 7331 14680;14681 11807;11808 11808 2 9606 Homo sapiens 0.09001044114620527 ETQALVLAPTR Unmodified 1197.6717 0.67173657 3883 Q14240;Q14240-2;E7EQG2;J3KSN7 EIF4A2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 0 0 6.5 0.5 1 1 46.803 46.888 2 0.00037181 12130 20230619_1887_Aki_TMTPro18x_K_F7 124.42 93.419 404980 303290 363490 429240 308360 430900 419790 409290 556560 524510 555570 572920 645240 531840 488250 733450 730580 748480 373960 278770 372400 422960 328690 434780 421010 422830 559100 525570 573890 578370 648410 560730 513980 733810 696790 710680 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 453630000 7752 3883 7332 14682;14683 11809;11810;11811 11811 3 9606 Homo sapiens 0.08080757597554111 ETQAQYQALER Unmodified 1335.6419 0.64189301 4395 Q96SB3;B3KNT0;Q96B17 PPP1R9B Neurabin-2 yes no 0 0 0 2.5 0.5 1 1 39.254 39.315 3 1.7529E-06 9324 20230619_1882_Aki_TMTPro18x_K_F3 156.01 138.65 97250 65649 103200 107010 130460 122250 124230 125980 147130 115460 125710 134900 128420 113880 124070 108500 137000 119670 89872 60474 104750 104820 133010 122540 126310 128150 147660 117890 130180 135290 130820 117860 126850 109830 130840 113610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94568000 7753 4395 7333 14684;14685 11812;11813 11813 2 9606 Homo sapiens -0.012502261384497615 ETQFAQIFEPLHK Unmodified 1586.8093 0.80929269 4592 Q9NTI5-2;Q9NTI5;B7Z5S1 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 0 0 0 7.5 0.5 1 1 59.681 59.723 3 9.9044E-07 17687 20230619_1887_Aki_TMTPro18x_K_F7 118.51 97.554 56943 48386 57089 60365 55017 59525 71177 57675 74214 59145 57880 60168 63909 54919 63809 68525 65360 67641 52667 44392 57979 59970 57718 60221 70879 59143 74741 59763 60455 60869 65045 57541 64999 68581 62537 64247 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98987000 7754 4592 7334 14686;14687 11814 11814 1 9606 Homo sapiens 0.039360414063139615 ETQIYIK Unmodified 893.48583 0.48583328 2953 F2Z2U4;H0Y4W2;Q9Y4A5-2;Q9Y4A5;Q59FH1;A0A994J575 TRRAP Transformation/transcription domain-associated protein yes no 0 0 0 6 0 1 47.541 47.622 2 0.006312 12855 20230619_1886_Aki_TMTPro18x_K_F6 109.86 62.796 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7755 2953 7335 14688 11815 11815 1 9606 Homo sapiens 0.03482980148896786 ETSDSSLVCSR Unmodified 1239.5401 0.54013005 2972 F5H225;Q5NDL2-2;Q5NDL2-3;Q5NDL2 EOGT EGF domain-specific O-linked N-acetylglucosamine transferase yes no 0 0 0 2 0 1 36.283 36.341 2 3.5688E-05 8237 20230619_1881_Aki_TMTPro18x_K_F2 143.5 114.03 12377 6028.7 11348 11746 19986 20201 15182 16084 24545 16344 21335 17537 17869 17287 14703 23686 25081 22883 11408 5577.5 11743 11490 19954 19684 15867 16710 24315 16566 21852 17775 18226 18168 15629 23625 23882 21751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11342000 7756 2972 7336 14689 11816 11816 1 9606 Homo sapiens -0.07005840552506015 ETSEELLPPPVQTQIK Unmodified 1807.9567 0.95674479 1143 A0A0S2Z5U1;Q8N183 NDUFAF2 Mimitin, mitochondrial yes no 0 0 0 4 0.816 1 1 1 57.159 57.191 3 4.2457E-11 16729 20230619_1885_Aki_TMTPro18x_K_F5 153.7 129.99 170620 151980 173700 177540 141010 163010 149610 145120 166440 157490 163070 142610 173230 142510 166530 184450 178600 180590 157880 139320 175700 177040 149360 165570 150980 149910 168480 158100 167800 145600 176140 149260 170220 184410 170780 171560 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 660640000 7757 1143 7337 14690;14691;14692 11817;11818;11819 11819 3 9606 Homo sapiens 0.08508468429795357 ETSGNLEQLLLAVVK Unmodified 1612.9036 0.903587 3416 V9HWE0;P08758;D6RBL5;D6RBE9 HEL-S-7;ANXA5 Annexin;Annexin A5 yes no 0 0 0 8 0 1 65.862 65.881 3 0.021895 20362 20230619_1888_Aki_TMTPro18x_K_F8 54.234 40.328 6958.1 4064.8 6248.7 7667.4 6856.9 8297 7872.8 7497.2 7360.3 8021.8 8705.3 9630.6 8991.6 8492.1 9030.9 8634.2 8519.5 13010 6417 3754.8 6425.9 7446.8 7106 8315.8 7863.7 7731.6 7584 8126.6 8889.9 9661.2 9173.4 8808 9153.7 8919.3 8187.4 12294 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23530000 7758 3416 7338 14693 11820 11820 1 9606 Homo sapiens 0.12165135437794561 ETSGTQGIEGHLK Unmodified 1355.6681 0.66810776 4337 Q96DP0;P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial yes no 0 0 0 4 0 1 39.563 39.606 3 1.1054E-18 9368 20230619_1883_Aki_TMTPro18x_K_F4 188.81 143.94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7759 4337 7339 14694 11821 11821 1 9606 Homo sapiens 0.004500430330608651 ETSLLAVPGALSPLAIPNAAAAAAAAAAGR Unmodified 2685.4814 0.48136361 1622 B4DI28;A0A6Q8PFC0;A0A6Q8PFE6;B4DSU5;A0A7I2RVZ4;Q9UKA9-5;Q9UKA9;Q9UKA9-2 PTBP2 Polypyrimidine tract-binding protein 2 yes no 0 0 0 5 0 1 65.706 65.75 3 0.0062218 20496 20230619_1885_Aki_TMTPro18x_K_F5 50.144 33.066 2710.5 1225 3171.7 2427.3 3885.1 5368.7 2338.8 4089.8 3380.5 4658 4440.5 3979.5 4567 4542.4 3388.1 4896.8 5045.6 5532.2 2502.8 1134.2 3189.9 2389.3 3947.6 5170.2 2487.6 4271.8 3435.6 4655.7 4506.2 4091.9 4606.7 4685.1 3566 4946 4814.9 5246 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12828000 7760 1622 7340 14695 11822 11822 1 9606 Homo sapiens 0.20604218723883605 ETSLVDAYEK Unmodified 1153.5503 0.55028404 4008 Q53SW3;Q9BPU6;E7EWB4;E9PHT0;E7ESV0 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 2.5 0.5 1 1 50.239 50.303 2 2.7652E-05 14266 20230619_1882_Aki_TMTPro18x_K_F3 173.32 122.27 88461 62529 80131 87975 47147 68594 48014 49855 69331 108400 108830 129910 152780 130970 68087 197670 174620 190880 81664 57484 81626 86458 51813 70372 49145 53864 71203 107050 111730 131030 150630 138570 77328 196750 166150 181310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96659000 7761 4008 7341 14696;14697 11823 11823 1 9606 Homo sapiens -0.020349095556412067 ETSMVHELNR Oxidation (M) 1230.5663 0.56628523 1833;2535 P61619;A0A8V8TMZ5;B4DR61;B3KNF6;C9JXC6;A0A8V8TMZ3;P61619-3;A0A8V8TN19;B3KME8;B3KNG2;B4DM08 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 no no 0 1 0 3.33 1.25 1 1 1 29.857 29.938 3 0.00023155 5623 20230619_1881_Aki_TMTPro18x_K_F2 112.95 95.725 14600 12828 14475 18597 22006 24089 18668 21493 18417 18841 21003 22670 21597 16019 17888 15966 23064 22734 13505 11787 14853 18364 22167 23874 19016 22056 18890 19291 21462 22600 21833 16761 18529 16430 22015 21522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48527000 7762 1833;2535 7342 14698;14699;14700 11824;11825 11824 1174 2 9606 Homo sapiens -0.03977526590369962 ETSNLYK Unmodified 853.41815 0.41814765 2044;3296 A8K4I8;Q9BPW8;B4DQI7;H7C2U6;F8WCR5;O75323;O75323-2;F8WBI5 NIPSNAP1;GBAS Protein NipSnap homolog 1;Protein NipSnap homolog 2 no no 0 0 0 5.5 0.5 1 1 40.942 41.033 2 0.0051486 9940 20230619_1885_Aki_TMTPro18x_K_F5 152.31 75.468 142260 64264 200060 206770 294330 294320 222150 280200 252890 144460 293350 364460 225800 259930 306820 90124 317460 323790 131620 60092 199830 197940 295960 290350 229330 283490 256930 160030 296760 356010 236870 262460 309920 107130 303690 305040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200140000 7763 2044;3296 7343 14701;14702 11826 11826 1 9606 Homo sapiens -0.014424697819094945 ETSSDVALASHILTALR Unmodified 1782.9476 0.94757708 296 A0A024R4H5;Q53HN4;O00273-2;O00273 DFFA DNA fragmentation factor subunit alpha yes no 0 0 0 8 0 1 61.845 61.874 3 7.5356E-19 18580 20230619_1888_Aki_TMTPro18x_K_F8 188.27 170.17 172470 137930 166120 160320 148270 177630 159010 158210 193310 142550 152260 202310 191270 127580 181030 199820 110600 205370 159410 126490 168970 160350 155890 177850 160810 162620 193240 146770 160230 200060 193170 138000 180520 199870 107150 194650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1341300000 7764 296 7344 14703 11827 11827 1 9606 Homo sapiens 0.08742119864155029 ETSVSKEDTDHEEK Unmodified 1632.7115 0.71148872 3306 O75475;Q05CM9;O75475-3;O75475-2 PSIP1 PC4 and SFRS1-interacting protein yes no 0 0 1 2 0 1 34.553 34.61 4 0.001783 7516 20230619_1881_Aki_TMTPro18x_K_F2 85.473 48.835 57800 21162 78844 79308 116210 127540 88596 116600 80273 65508 103230 120180 78107 82452 110610 24323 93651 81477 53423 19902 78904 75815 116910 124900 90782 118410 83085 70564 103920 118070 82119 83188 110480 28890 89685 76826 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34088000 7765 3306 7345 14704 11828 11828 1 9606 Homo sapiens -0.07955856770990977 ETSYGLSFFKPR Unmodified 1430.7194 0.71941505 4742 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog yes yes 0 0 1 3.5 0.5 1 1 55.021 55.048 3 7.5872999999999995E-19 16243 20230619_1883_Aki_TMTPro18x_K_F4 241.35 220.45 192220 152250 190050 229050 221760 263080 244080 256170 262520 237190 256690 220920 251960 196250 243430 212480 195580 155600 177690 140010 194000 225300 228560 263120 245380 261610 266090 240250 263220 224270 256670 204110 244870 210260 187320 148540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195110000 7766 4742 7346 14705;14706 11829 11829 1 9606 Homo sapiens 0.021284117977529604 ETTEVDLLTK Unmodified 1147.5972 0.59723423 902 A0A090N7X1;A0A090N7Y2;Q9UG63;Q9UG63-2;C9JHK9;C9JZV3 ABCF2 ATP-binding cassette sub-family F member 2 yes no 0 0 0 3.5 0.5 1 1 53.625 53.644 2;3 4.742E-11 15825 20230619_1882_Aki_TMTPro18x_K_F3 173.32 130.08 37535 31336 33516 39393 34722 44562 38523 41131 54078 41409 42077 45270 46152 38048 39148 46669 92532 49329 34682 28753 34443 39179 36160 44571 39099 42260 53698 41980 43926 45535 46714 39950 42894 46886 87719 46983 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18915000 7767 902 7347 14707;14708 11830;11831 11830 2 9606 Homo sapiens 0.029339499955085557 ETTGPGTAGPQSNTTSSLK Unmodified 1832.8752 0.8752 1376 A0A8Q3SI84;A0A8Q3SI68;A0A2R8YH03;A0A8V8TMM4;A0A8V8TMN1;Q5VWN6-2;Q5VWN6;Q6IPC8 FAM208B;C10orf18 Protein FAM208B yes no 0 0 0 6 0 1 41.373 41.468 3 5.2317E-06 10148 20230619_1886_Aki_TMTPro18x_K_F6 92.307 75.026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7768 1376 7348 14709 11832 11832 1 9606 Homo sapiens -0.007922590001044227 ETTGTGPNVYHENDTIAK Unmodified 1945.9017 0.9017491 252 Q4G0F5;A0A024R3L9 VPS26B Vacuolar protein sorting-associated protein 26B yes no 0 0 0 3.5 0.5 1 1 41.22 41.271 3 6.7707E-14 10070 20230619_1883_Aki_TMTPro18x_K_F4 158.17 138.07 210990 162160 185760 224120 232030 246650 238410 234010 252000 278030 316490 294230 289610 238240 285160 294170 293410 270080 194830 148990 191730 221430 237490 247390 240450 241140 258600 279040 320380 296140 296120 250540 290550 293380 280490 256870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 265470000 7769 252 7349 14710;14711 11833;11834;11835 11835 3 9606 Homo sapiens -0.033365701087404886 ETTIDGEELVK Unmodified 1232.6136 0.61361257 1656 A0A7I2V3A9;B2RAM6;P52732;A0A7I2V3V3;A0A7I2YQY4 KIF11 Kinesin-like protein;Kinesin-like protein KIF11 yes no 0 0 0 2 0 1 50.95 50.995 3 0.012741 14886 20230619_1881_Aki_TMTPro18x_K_F2 68.536 50.224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7770 1656 7350 14712 11836 11836 1 9606 Homo sapiens 0.006610311616213949 ETTNIFSNCGCVR Unmodified 1556.6712 0.671161 4650 Q9UBB4;A0A1W2PQD2;Q9UBB4-2;Q7Z524;B1AHE4 ATXN10 Ataxin-10 yes no 0 0 0 6.5 0.5 2 2 46.71 46.796 2;3 5.0871E-06 12089 20230619_1887_Aki_TMTPro18x_K_F7 99.844 95.453 138590 84151 128360 142520 149140 161350 151590 143130 196330 156500 160550 180540 178810 162540 140450 152890 226750 216950 127870 77596 131640 139260 153400 161230 154030 147880 195980 158300 167300 181450 180280 167800 148300 157340 216050 205420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 270650000 7771 4650 7351 14713;14714;14715;14716 11837;11838 11838 2 9606 Homo sapiens -0.0849077317609499 ETVDQVEELRR Unmodified 1372.6947 0.69465686 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 2 0 1 40.033 40.103 3 1.5277E-23 9846 20230619_1881_Aki_TMTPro18x_K_F2 221.44 180.68 191830 140320 168180 160410 170760 209790 175720 179290 314340 265490 264140 314950 340290 298120 188480 427360 384250 424020 177080 128700 172820 161040 177820 207690 181130 187530 310340 265440 276770 317020 338000 314830 206470 426390 366030 402630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 398440000 7772 3881 7352 14717 11839 11839 1 9606 Homo sapiens 0.023217319243713064 ETVEEQASTTER Unmodified 1378.6212 0.62121715 1592 Q13620-3;A0A7P0T954;Q13620;Q13620-1;K4DI93;A0A669KAX4;A0A7P0TAQ3;A0A7P0T9L3;A0A7P0T8P8;A0A7P0T9C8 CUL4B Cullin-4B yes no 0 0 0 1 0 1 33.763 33.763 2 1.0672000000000001E-24 7463 20230619_1880_Aki_TMTPro18x_K_F1 265.82 250.49 52841 27087 46192 51117 69312 77413 60390 64263 78131 59465 78986 76582 71239 68598 64059 43362 86799 74180 48696 25039 47857 49934 69980 75929 61950 66404 78544 60927 80628 76653 72682 69693 66394 45790 82742 70176 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62279000 7773 1592 7353 14718 11840 11840 1 9606 Homo sapiens -0.05294861308766485 ETVEEQVSTTER Unmodified 1406.6525 0.65251728 3864 Q13619;B2RBV7;A0A0A0MR50;Q13619-2;B4DKT2 CUL4A Cullin-4A yes no 0 0 0 1 0 1 38.324 38.324 3 7.0896E-10 9328 20230619_1880_Aki_TMTPro18x_K_F1 179.98 152.31 53465 44786 52803 51039 74188 82506 65562 72152 89682 34810 46670 33413 35526 28006 38569 36876 49018 28788 49440 41055 54009 51453 75184 80792 67321 73377 88084 37247 49328 33896 36777 29534 39726 36473 46659 27503 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64660000 7774 3864 7354 14719 11841 11841 1 9606 Homo sapiens -0.03454288274656392 ETVGDLEAMNEMNDELQENAR Unmodified 2407.0268 0.026767975 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;Q59F36;O95654 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 0 0 1 0 1 60.579 60.579 3 5.9542000000000005E-30 18757 20230619_1880_Aki_TMTPro18x_K_F1 200.99 193.28 6467.7 5965.4 6521.5 8034.1 6388.5 8136.5 7437.2 9425.8 11269 9166.2 8170.8 8375.7 8603.9 7593.5 8789.2 7319.9 10105 11344 5985.7 5475.8 6629.1 7943.3 6689.9 8244.4 7558.4 9526.5 11136 9256 8549.9 8506.5 8781.2 7851.9 8998.5 7589.3 9664 10727 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27853000 7775 1717 7355 14720 11842 11842 1 9606 Homo sapiens -0.12046433816794888 ETVGQVHPLSR Unmodified 1221.6466 0.64658446 1392 A0A2X0U2G7;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 yes no 0 0 0 5.5 0.5 1 1 35.11 35.182 3 5.8713E-05 7712 20230619_1886_Aki_TMTPro18x_K_F6 128.57 64.895 29176 15410 31379 33141 35970 38663 36687 35258 41533 38380 45954 43142 38932 31202 39038 40502 62914 43993 26936 14273 31773 32049 37006 38569 37101 36344 42192 38766 46615 43187 39979 33082 41010 40742 59834 41817 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30457000 7776 1392 7356 14721;14722 11843 11843 1 9606 Homo sapiens 0.044627027949900366 ETVNVITLYK Unmodified 1178.6547 0.65468953 4407 Q99816;F5H442;L0L6B6 TSG101 Tumor susceptibility gene 101 protein yes no 0 0 0 8 0 1 57.669 57.721 2 0.00022421 16893 20230619_1888_Aki_TMTPro18x_K_F8 136.63 106.65 81254 68386 80635 84193 83170 91741 92088 86925 88930 103530 99083 91773 101820 86611 109580 110420 100000 100380 75142 62735 82027 83832 86399 92094 92252 89587 91271 103360 101300 93561 104190 90770 110770 110020 95777 95444 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24954000 7777 4407 7357 14723 11844 11844 1 9606 Homo sapiens 0.07250836991738652 ETVPTLAPK Unmodified 954.5386 0.53859714 4283 Q8WW12;Q8WW12-2 PCNP PEST proteolytic signal-containing nuclear protein yes no 0 0 0 6.5 0.5 1 1 47.555 47.64 3 0.0032724 12491 20230619_1887_Aki_TMTPro18x_K_F7 82.287 60.201 136850 124900 124190 125150 166880 147420 141160 153160 205710 131710 129550 133080 130660 105830 129370 166850 152470 132620 126540 114330 127790 126770 169140 147680 145780 155440 202710 134430 136570 134210 133300 113250 133050 164660 145520 126400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 286210000 7778 4283 7358 14724;14725 11845 11845 1 9606 Homo sapiens 0.0595093821170849 ETVSEESNVLCLSK Unmodified 1593.7556 0.75560214 3447 P13639;Q8TA90;B4DPU3;Q6W6M8 EEF2 Elongation factor 2 yes no 0 0 0 3.44 1.42 1 1 3 2 1 1 53.858 53.897 2;3 2.3326E-09 15737 20230619_1883_Aki_TMTPro18x_K_F4 166.38 147.55 805230 692390 747430 827040 667510 757040 775210 731130 920980 994310 916060 908980 1155500 950910 884840 1184000 944260 1088200 744360 634940 763330 823300 703050 770430 780020 756070 930620 988350 950320 928370 1158600 991980 909530 1179800 903880 1034000 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 12089000000 7779 3447 7359 14726;14727;14728;14729;14730;14731;14732;14733;14734 11846;11847;11848;11849;11850 11849 5 9606 Homo sapiens -0.017525438783650316 ETVSQRPGATVPTDFATFPSSAFLR Unmodified 2681.3449 0.34492971 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;E7EWF7 DCTN1;DKFZp686I0746 Dynactin subunit 1 yes no 0 0 1 2.5 0.5 1 1 60.62 60.641 3 1.3415E-53 18876 20230619_1881_Aki_TMTPro18x_K_F2 253.39 238.62 68569 56983 59918 69832 58392 66208 71613 66986 73320 75649 76448 79724 88101 65938 83074 90728 80190 89659 63344 52274 61629 69418 61150 67247 71491 68644 74751 76098 78837 80298 89238 69822 84450 90688 76819 85135 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171660000 7780 1717 7360 14735;14736 11851;11852 11851 2 9606 Homo sapiens 0.07151104493141247 ETVVEVPQVTWEDIGGLEDVKR Unmodified 2497.27 0.27003344 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;Q9NTC4;Q9HAP0 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 1 6 0 1 62.665 62.716 3 0.053689 19324 20230619_1886_Aki_TMTPro18x_K_F6 38.237 22.816 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7781 3656 7361 14737 11853 11853 1 9606 Homo sapiens 0.08128921961997548 ETVYCIGQR Unmodified 1124.5284 0.52844316 1094 A0A0S2Z4E4;B2R6S4;A0A0S2Z4Y3;P16333;C9JAB9;P16333-2 NCK1 Cytoplasmic protein NCK1 yes no 0 0 0 5.5 0.5 1 1 42.012 42.101 2 0.013741 10404 20230619_1885_Aki_TMTPro18x_K_F5 78.377 54.526 223280 201790 226070 219620 255020 281580 255610 270640 326030 195620 215520 183470 185360 158670 226230 211570 224590 199230 206620 184850 229820 221260 262710 279820 259840 275140 323300 201590 224860 186210 192160 167280 229150 211120 214730 189450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78478000 7782 1094 7362 14738;14739 11854;11855 11854 2 9606 Homo sapiens -0.028839927851549874 ETVYCLNDDDETEVLK Unmodified 1941.8514 0.85135302 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 2 0.816 1 1 1 56.701 56.71 3 8.117699999999999E-26 17292 20230619_1881_Aki_TMTPro18x_K_F2 228.73 202.59 80068 49986 64573 83387 54005 89741 61211 82174 121180 107170 99144 173160 173900 195430 77664 265900 250560 357180 73808 46077 66862 81468 57539 89962 63194 85125 119230 109100 106390 173600 171120 204490 91285 270490 238800 337900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 682740000 7783 3444 7363 14740;14741;14742 11856;11857 11856 2 9606 Homo sapiens -0.08189860548782235 ETWLSENQR Unmodified 1161.5415 0.54145068 2337;3778;3779;859 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;A0A024R674;P11277-2;P11277;P11277-3;A4QPE4;Q59FP5;B2RMN7;Q01082-2;Q01082-3;A0A087WYQ1;O15020-2;O15020 SPTBN1;SPTB;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, erythrocytic;Spectrin beta chain, non-erythrocytic 2 no no 0 0 0 3 0.816 1 1 1 43.987 44.052 2 0.00013906 11382 20230619_1882_Aki_TMTPro18x_K_F3 173.73 146.94 147300 129410 151840 145370 182590 182330 181980 183190 252860 226830 239670 217250 226520 185620 195200 209370 247530 239630 136300 118590 154280 146060 187160 181680 185680 188170 253000 226680 245720 219920 230120 193880 202000 211670 236270 227310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 353040000 7784 2337;3778;3779;859 7364 14743;14744;14745 11858 11858 1 9606 Homo sapiens -0.03285838401438923 ETWTTSVAEVQPSVLQVVNLPLVERPVCK Unmodified 3277.738 0.73804859 2771 CON__P00735 yes yes 0 0 1 2 0 1 63.725 63.734 4 4.1426E-39 20276 20230619_1881_Aki_TMTPro18x_K_F2 210.5 203.07 + 10949 11823 15527 19154 33528 41129 24432 27167 45127 92285 174160 272860 96168 126870 160090 100560 125300 211430 10180 10872 15694 18995 33220 39591 25881 30521 49887 95065 169940 263320 103850 134070 159460 107880 120820 199320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174980000 7785 2771 7365 14746 11859;11860 11859 2 9606 Homo sapiens 0.19028908375003084 ETYEEDREYESQAK Unmodified 1775.7486 0.7486025 1144 C9IYN3;A8K894;V9GYK2;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9-4;Q8WVV9;B7WPG3;Q8WVV9-5;A0A0S2Z610;Q8WVV9-3;Q8WVV9-2 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 0 0 1 1.5 0.5 1 1 38.602 38.635 3 1.0319E-06 9489 20230619_1880_Aki_TMTPro18x_K_F1 130.19 114.8 29097 22458 27891 30862 32512 38191 31572 34070 41844 39800 48565 46158 50962 41503 40207 52680 53359 53217 26886 20633 28522 30560 33418 37955 32217 35234 42304 40120 49583 46447 51421 43561 41869 52750 50925 50540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59027000 7786 1144 7366 14747;14748 11861 11861 1 9606 Homo sapiens -0.10824185225214933 ETYGDMADCCEK Oxidation (M) 1493.5109 0.51088012 2776 CON__P02769 yes yes 0 1 0 1.75 0.829 2 1 1 38.868 38.898 2;3 1.5205E-05 9282 20230619_1881_Aki_TMTPro18x_K_F2 124.46 119.18 + 86410 118790 149240 99705 439010 503430 235190 221590 368480 142610 164620 215370 115830 131710 134430 130290 166180 198760 80721 108470 150480 107420 427870 471890 252690 243410 359200 151290 176680 212280 121030 138430 138110 134800 158920 187940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 553420000 7787 2776 7367 14749;14750;14751;14752 11862;11863;11864 11863 1655 3 9606 Homo sapiens -0.21613488955313187 ETYGDMADCCEK Unmodified 1477.516 0.51596549 2776 CON__P02769 yes yes 0 0 0 2 0.816 1 1 1 43.989 44.04 3 6.026E-07 11708 20230619_1881_Aki_TMTPro18x_K_F2 147.62 142.35 + 150670 215400 308590 157240 693850 877610 394650 379120 707050 288920 327460 406020 258020 271380 264340 277550 366770 471270 141180 196490 305380 172970 683350 821060 424370 418680 686420 301760 351200 401960 266530 284700 274450 289560 350660 445180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 508420000 7788 2776 7367 14753;14754;14755 11865;11866 11866 2 9606 Homo sapiens -0.20369185092704356 ETYPNYLPLYVAR Unmodified 1597.814 0.81404372 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1;A0A494C0A3;A0A494C1S6 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 1.5 0.5 1 1 60.582 60.587 2 2.4745E-07 18890 20230619_1881_Aki_TMTPro18x_K_F2 152.54 126.88 55806 52527 66721 65228 54027 64652 60570 70085 73389 80304 76475 74729 79787 63056 73464 86596 77695 83452 51735 48172 66670 64844 57325 65536 61153 71467 74213 80410 78450 75737 80993 66701 75124 86424 74337 79275 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100890000 7789 1552 7368 14756;14757 11867;11868 11868 2 9606 Homo sapiens 0.03904925549090876 ETYVEQEQGENANDRNDR Unmodified 2165.921 0.920981 2170 A8QI98;Q9Y2L1;F2Z2C0 DIS3 Exosome complex exonuclease RRP44 yes no 0 0 1 1 0 1 33.292 33.292 3 2.4628E-38 7290 20230619_1880_Aki_TMTPro18x_K_F1 247.4 231.68 43924 36575 43974 47535 59168 63505 56956 58143 72427 66033 69066 64470 69079 58848 59891 74817 78582 71010 40620 33572 44919 47303 60203 62878 58022 59954 72770 66287 70977 65363 70089 61731 62174 74671 74954 67514 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86607000 7790 2170 7369 14758 11869 11869 1 9606 Homo sapiens -0.11534265555792445 EVAAFAQFGSDLDAATQQLLSR Unmodified 2337.1601 0.16008906 3504 V9HW26;P25705;P25705-2;P25705-3 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 7 0 1 66.429 66.452 3 1.0333E-80 20689 20230619_1887_Aki_TMTPro18x_K_F7 321.42 307.83 15917 16047 18687 15276 16028 15915 18579 19403 20133 20384 21095 19360 23021 16806 19195 23208 22504 23475 14760 14678 18690 15525 16904 16141 18645 19600 20466 20510 21668 19628 23235 17775 19791 23220 21506 22290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82486000 7791 3504 7370 14759 11870 11870 1 9606 Homo sapiens 0.044995414134518796 EVAALCR Unmodified 817.41162 0.41162248 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 4.5 1.12 1 1 1 1 38.409 38.482 2 0.0069751 8900 20230619_1883_Aki_TMTPro18x_K_F4 128.82 82.049 1323000 866170 1185400 1141700 1472100 1466700 1428600 1494500 1796700 1215100 1225300 1084500 1150100 981360 1165100 962220 1516800 1199000 1220800 795980 1219500 1134800 1504800 1459200 1453900 1516700 1785200 1240000 1279900 1103500 1177700 1015300 1202500 981250 1445600 1137500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1231500000 7792 150 7371 14760;14761;14762;14763 11871;11872;11873 11872 3 9606 Homo sapiens -0.004386862142609971 EVADEVTRPR Unmodified 1170.5993 0.59929991 2188 B1AHB0;P33992;Q53FG5;A8K521;B1AHA9 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 1 2.5 0.5 1 1 34.085 34.146 3 7.4441E-06 7230 20230619_1882_Aki_TMTPro18x_K_F3 160.77 107.09 99108 62586 82244 105090 109760 137110 114610 111720 168110 119460 156470 164020 162250 142280 130090 138700 166360 163370 91382 57693 85533 102930 112230 135520 116860 116120 167550 121810 161330 163730 163940 147270 134890 140810 158800 154920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 121600000 7793 2188 7372 14764;14765 11874;11875 11875 2 9606 Homo sapiens 0.020824235239842892 EVADEVTRPRPSGEEVLQDIQVMLK Unmodified 2837.4593 0.45930754 2188 B1AHB0;P33992;Q53FG5;A8K521;B1AHA9 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 2 5 0 1 62.025 62.073 4 0.0066632 18842 20230619_1885_Aki_TMTPro18x_K_F5 63.573 44.194 164600 145270 147500 153190 141110 180070 164520 152190 183630 152120 128100 128200 139540 117390 157060 154010 139960 137760 152140 133050 151230 154460 147950 179410 165070 157430 183750 153110 134630 130880 142890 123390 158440 153290 134060 131030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114280000 7794 2188 7373 14766 11876 11876 1 9606 Homo sapiens 0.11407626193067699 EVAELTR Unmodified 816.43413 0.43413207 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 39.26 39.32 2 0.067495 9337 20230619_1882_Aki_TMTPro18x_K_F3 78.324 32.372 62141 41612 57184 59461 64433 75437 67723 77170 83400 73429 85530 87927 90837 72342 81275 72840 96649 93409 57357 38271 58633 58783 66510 75070 68602 78574 84126 74853 87896 88055 92061 75211 83608 74373 92302 88514 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 547070000 7795 2337;3778;3779 7374 14767;14768 11877 11877 1 9606 Homo sapiens 0.018572364549868325 EVAEVSPLSAANMSIAVK Oxidation (M) 1830.9397 0.93971451 830 A0A087WW63;A0A1B0GTW2;A0A1C7CYY9;A0A1B0GTN7;A0A1B0GU81;A0A1B0GUS3;A0A384DVW2;Q9NS89;A0A590UJK2;A0A1B0GU74;B5TYJ1;A0A1B0GTI4;O00555-6;O00555-2;O00555-4;O00555;O00555-3;O00555-5 CACNA1A Voltage-dependent P/Q-type calcium channel subunit alpha-1A yes no 0 1 0 7 0.816 1 1 1 50.252 50.33 4 0.035006 13885 20230619_1886_Aki_TMTPro18x_K_F6 49.559 13.92 1536100 1288900 1541000 1480600 1251500 1527900 1620400 1406600 1868300 2192000 2023900 1842500 2221300 1893100 1929600 2564200 2150800 2114100 1420700 1181700 1560500 1480800 1334100 1538900 1620200 1466800 1897300 2162700 2076500 1889200 2247100 1986300 1983100 2538900 2055500 2012900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5700300000 7796 830 7375 14769;14770;14771 11878;11879 11878 492 2 9606 Homo sapiens 0.05748224552348802 EVAFFNNFLTDAK Unmodified 1514.7405 0.74054442 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1;Q7Z4Y3;A0A0A0MSP6 SRRT Serrate RNA effector molecule homolog yes no 0 0 0 8 0 1 63.952 63.974 3 0.00079599 19521 20230619_1888_Aki_TMTPro18x_K_F8 88.087 71.948 738970 638000 628500 804190 753480 820920 789540 759670 816510 848030 1018800 802820 795790 896650 830920 997000 856660 1215500 682690 585360 650600 798400 773810 827500 794890 782900 838120 851150 1024700 821430 822320 926650 846860 1011900 821890 1150900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 383510000 7797 4464 7376 14772 11880 11880 1 9606 Homo sapiens 0.00376377106590553 EVAGAKPHITAAEGK Unmodified 1477.7889 0.7888916 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463;B4E2B5 IMMT MICOS complex subunit MIC60 yes no 0 0 1 7 0 1 39.805 39.87 4 1.2572E-13 9174 20230619_1887_Aki_TMTPro18x_K_F7 151.48 124.94 63406 59632 83813 80469 111990 91597 102290 91352 53818 81400 77011 49785 42083 28265 79525 22952 27583 18329 58841 54736 83817 79703 113380 91845 102230 93083 58632 81722 76307 51226 45698 29643 77029 23093 26829 17492 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78314000 7798 3954 7377 14773 11881 11881 1 9606 Homo sapiens 0.06910870746492037 EVAKPSPGEGEVLLK Unmodified 1551.8508 0.85082315 3992 Q53FA7;H7BZH6;Q53FA7-2 TP53I3 Quinone oxidoreductase PIG3 yes no 0 0 1 6 0 1 50.108 50.185 3 1.4525E-07 13951 20230619_1886_Aki_TMTPro18x_K_F6 129.25 75.726 140240 102710 112970 145320 143380 157680 136500 133360 140990 163660 181660 200510 177220 167140 175470 172720 183360 181750 129380 94415 117670 143310 146400 157930 138200 138780 145110 164860 184430 200640 181020 173710 178880 174030 175350 172530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112640000 7799 3992 7378 14774 11882 11882 1 9606 Homo sapiens 0.09697177374982857 EVANSTANLVK Unmodified 1144.6088 0.60880197 1292;4740 A0A1S5UZ07;Q9Y490;Q9Y4G6;A0A1B0GVU7;G1UI21;H0YMT1 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 0 6.5 0.5 1 1 45.506 45.592 2 6.0327E-09 11559 20230619_1887_Aki_TMTPro18x_K_F7 212.82 141.44 88513 68588 74413 81879 98597 105430 101580 91828 135180 88117 108690 105440 91430 83653 106420 108270 127100 116770 81710 62920 77180 81899 100640 104520 103200 94677 134550 89888 112010 105580 94662 88284 109100 108870 121340 110850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99291000 7800 1292;4740 7379 14775;14776 11883;11884 11884 2 9606 Homo sapiens 0.0422819180953411 EVAQSLLNAK Unmodified 1071.5924 0.59242362 3158 K7EJH0;K7EMX1;K7EJV2;K7ESQ2;Q8NBT2;B4E086;Q8NBT2-2 SPC24 Kinetochore protein Spc24 yes no 0 0 0 8 0 1 52.766 52.841 2 6.7831E-11 14773 20230619_1888_Aki_TMTPro18x_K_F8 190.96 133.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7801 3158 7380 14777 11885 11885 1 9606 Homo sapiens 0.05949110643427957 EVATAIR Unmodified 758.42865 0.42865276 3457 P15880;Q6IPX5;Q3KQT6;Q8N5L9;H0YEN5;Q8J014;E9PM36;I3L404;E9PMM9;E9PPT0;Q8NI61 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 yes no 0 0 0 4 0.816 1 1 1 36.345 36.409 2 0.026043 8014 20230619_1885_Aki_TMTPro18x_K_F5 97.075 4.3821 452350 274110 471410 485300 545630 578760 520450 537220 585910 498570 525080 541220 589210 492530 454710 351630 708300 644150 417750 252920 478450 473640 560010 576900 528340 550600 590700 507420 544380 545350 593130 502780 478060 372360 674800 608950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 397240000 7802 3457 7381 14778;14779;14780 11886;11887 11887 2 9606 Homo sapiens 0.03977557663188236 EVATDVR Unmodified 788.40283 0.40283194 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;E9PLT0;E9PNG3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;A0A8I5KPQ8;A0A8I5KS07;A0A8I5KW29;A0A8I5KYL4;A0A8I5KNL1 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 0 1.5 0.5 1 1 32.978 33.007 2 0.02054 7185 20230619_1880_Aki_TMTPro18x_K_F1 104.45 39.671 48560 18479 49864 55325 69485 80822 54391 72936 63856 50514 69838 65312 59147 58513 62452 26723 80342 58310 44762 17270 50872 53089 70262 79506 56069 74387 64699 52717 70881 65363 60928 58906 64219 29267 76545 55129 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63543000 7803 88 7382 14781;14782 11888 11888 1 9606 Homo sapiens 0.00016663420910845161 EVCEQNQQLLR Unmodified 1415.6827 0.68271197 3350 Q59HG1;O95239;O95239-2;B3KNC0 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 0 0 0 3 0 1 41.351 41.41 2 0.0035148 10198 20230619_1882_Aki_TMTPro18x_K_F3 99.788 84.126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7804 3350 7383 14783 11889 11889 1 9606 Homo sapiens -0.008502080904690956 EVCFACVDGK Unmodified 1183.5002 0.5001795 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;J3KS13 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 4.5 0.5 2 2 51.105 51.158 2;3 0.00012773 14503 20230619_1883_Aki_TMTPro18x_K_F4 106.4 93.903 580010 444890 473130 561740 474160 526220 572550 538340 630740 724620 619080 641200 755820 589330 523250 886210 758330 735460 535290 408380 490090 557160 495370 535150 573310 554260 639600 719660 641620 653160 755910 625430 551150 876200 723130 700220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1233700000 7805 826 7384 14784;14785;14786;14787 11890;11891 11890 2 9606 Homo sapiens -0.08423058756761748 EVCFTIENK Unmodified 1138.5329 0.53285983 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 0 5 0.816 1 1 1 52.589 52.647 3 0.00047087 14868 20230619_1885_Aki_TMTPro18x_K_F5 113.66 67.5 377860 320790 375640 346440 378220 445360 435810 384650 444800 395230 419670 361240 422240 346410 383560 438220 426560 410470 349460 293910 381710 349240 394330 441490 436280 397500 451480 398020 431510 368110 428980 362740 393380 437200 407600 390220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 425360000 7806 1229 7385 14788;14789;14790 11892;11893;11894 11893 3 9606 Homo sapiens -0.030865283622688366 EVCGFAPYER Unmodified 1226.539 0.53900784 4731 Q9Y3U8;J3QSB5 RPL36 60S ribosomal protein L36 yes no 0 0 0 4 0.816 1 1 1 47.212 47.278 2 3.813E-05 12689 20230619_1883_Aki_TMTPro18x_K_F4 178.94 151.8 557360 481240 505050 475730 483740 587870 592680 576470 629710 620030 386090 409450 698760 462890 405750 706120 644280 640400 515150 440560 517010 482810 507580 585810 592270 590630 630580 618010 421230 427220 688820 489380 432540 700970 614110 608960 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2739900000 7807 4731 7386 14791;14792;14793 11895;11896;11897;11898 11897 4 9606 Homo sapiens -0.0652001013077097 EVCQLLPFLVR Unmodified 1372.7537 0.75369207 4651 Q9UBB6-2;Q9UBB6;H7C2R2 NCDN Neurochondrin yes no 0 0 0 3 0 1 63.999 64.03 3 0.09165 20158 20230619_1882_Aki_TMTPro18x_K_F3 36.417 22.387 7848.3 7692 8406.1 9687.2 7873.9 9231.2 9139.6 10564 9473.1 9645.8 8882.7 8329.5 10901 9156 13379 11943 9404 13319 7270.3 7054.3 8493.5 9613.5 8255.9 9397.8 9158.1 10672 9614.4 9755.6 9235.2 8553.3 11174 9570.5 13335 12037 9063.2 12622 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28198000 7808 4651 7387 14794 11899 11899 1 9606 Homo sapiens 0.08222536684979787 EVCSEQAETGPCR Unmodified 1521.6188 0.61879108 1165 A0A218KGR2;P05067;P05067-8;P05067-11;E9PG40;A0A140VJC8;P05067-9;P05067-7;B4DGD0;H7C0V9 APP Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes no 0 0 0 1 0 1 33.954 33.954 2 2.5347999999999998E-21 7551 20230619_1880_Aki_TMTPro18x_K_F1 237.53 223.41 22360 13012 20262 28150 24860 20729 22264 26132 25281 24652 29244 33180 31669 21781 24039 21139 35399 31871 20622 12047 20863 27055 25344 21641 22709 26292 25746 25233 29940 32880 31854 22844 25185 21864 33735 30170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27882000 7809 1165 7388 14795 11900 11900 1 9606 Homo sapiens -0.12115356309709568 EVCTVVAR Unmodified 932.47495 0.47495102 2017 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 yes no 0 0 0 4.5 0.5 1 1 37.552 37.62 2 0.012282 8576 20230619_1883_Aki_TMTPro18x_K_F4 95.909 54.607 32261 22791 29745 35507 47893 47133 34061 41171 47191 47787 53836 62068 56549 46362 47771 44758 63487 58377 29786 20978 30721 34935 47927 46640 35570 42625 47624 48368 55084 61771 57209 48275 49576 45782 60556 55321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82166000 7810 2017 7389 14796;14797 11901 11901 1 9606 Homo sapiens 0.006012545029648209 EVDAEYEAR Unmodified 1080.4724 0.47236807 1020 Q8N6H7;G5E9L0;A0A0D9SF70;E9PN48;B3KV00;B4E327;H0YDN9;Q8N6H7-3;Q8N6H7-2;E9PMU9 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 0 0 0 1 0 1 37.37 37.37 2 1.2737E-06 8935 20230619_1880_Aki_TMTPro18x_K_F1 191.78 172.3 59013 42608 51986 65983 70408 78565 75162 77181 106090 68329 85742 85130 84044 75876 67472 52471 97962 81519 54474 39211 53768 64830 71879 78417 76418 78702 105360 70123 88817 85299 85106 77353 70486 54798 93321 77179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75877000 7811 1020 7390 14798 11902 11902 1 9606 Homo sapiens -0.06464922421014307 EVDATSPAPSTSSTVK Unmodified 1575.7628 0.76279601 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;X6RHM1;H3BM18 IFI16 Gamma-interferon-inducible protein 16 yes no 0 0 0 4 0.816 1 1 1 41.999 42.085 2;3 5.1263E-05 10396 20230619_1885_Aki_TMTPro18x_K_F5 95.57 76.495 19663 13177 21189 24726 31751 29094 28885 31649 35101 27678 31521 30339 32328 23102 28971 24088 33149 27996 18173 12163 21574 24059 32022 29140 29478 32036 35246 28269 32534 30430 32782 24146 29718 24429 31640 26568 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11853000 7812 2829 7391 14799;14800;14801 11903;11904;11905 11905 3 9606 Homo sapiens -0.0020548800630422193 EVDDFFEQEK Unmodified 1284.551 0.55101232 4752 Q9Y5X3;Q53FH8;Q6P5V6;B7Z476;A0A087WUY5;Q5QPE4;Q5QPE5 SNX5 Sorting nexin-5 yes no 0 0 0 2 0.816 1 1 1 57.421 57.437 3 0.00010569 17562 20230619_1881_Aki_TMTPro18x_K_F2 102.55 77.163 87216 74747 84924 94833 88676 99934 94317 91423 97499 108260 107090 96338 116220 87277 114750 113270 103140 118280 80653 68587 86578 94171 91971 100470 94893 94449 99610 108130 109780 98080 118150 91786 116070 113690 98902 112240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 176070000 7813 4752 7392 14802;14803;14804 11906;11907 11907 2 9606 Homo sapiens -0.07988114906584087 EVDDLGPEVGDIK Unmodified 1384.6722 0.67219008 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 2 0 1 55.389 55.41 3 0.00042971 16750 20230619_1881_Aki_TMTPro18x_K_F2 89.46 58.232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7814 3246 7393 14805 11908 11908 1 9606 Homo sapiens -0.004759122639143243 EVDDLTAELK Unmodified 1131.5659 0.5659341 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;B3KVJ5 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 2.5 0.5 1 1 56.62 56.647 3 0.022098 17050 20230619_1882_Aki_TMTPro18x_K_F3 49.189 27.196 27625 40968 37243 37683 34685 26827 51501 36385 47166 53179 48301 43078 58428 32925 23753 39686 48232 48200 25533 37428 36999 38233 36531 26451 50778 37007 48380 52513 49863 43820 57561 34763 25009 40195 45911 45691 1 2 2 2 2 1 2 2 2 2 2 2 2 2 1 2 2 2 414510000 7815 4593 7394 14806;14807 11909;11910 11910 2 9606 Homo sapiens 0.005413769614051489 EVDEDFDSK Unmodified 1082.4404 0.44039923 27 Q96C19;A0A024QZ77;H0Y4Y4 EFHD2 EF-hand domain-containing protein D2 yes no 0 0 0 1 0 1 46.288 46.288 2 0.00032145 12856 20230619_1880_Aki_TMTPro18x_K_F1 139.96 100.82 31596 22158 25184 26536 28195 28034 31003 26111 34317 35615 39524 45479 37855 33755 37724 34703 52262 44713 29141 20336 26167 26462 29116 28206 31191 27084 34983 35780 40278 45282 38708 35257 39142 35431 49811 42390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30119000 7816 27 7395 14808 11911 11911 1 9606 Homo sapiens -0.09752334894801606 EVDEDSEPEREVR Unmodified 1587.7013 0.70125838 2722 B9A018;Q53GS9;Q53GS9-3;F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 0 0 1 1 0 1 33.585 33.585 3 2.5345E-08 7409 20230619_1880_Aki_TMTPro18x_K_F1 150.26 129.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7817 2722 7396 14809 11912 11912 1 9606 Homo sapiens -0.06908419705587221 EVDEGAWETK Unmodified 1162.5142 0.51423288 567 A0A024R9D2;Q86UE4;E5RJU9;H0YB56 MTDH Protein LYRIC yes no 0 0 0 2 0 1 48.472 48.537 2 1.2258E-06 13749 20230619_1881_Aki_TMTPro18x_K_F2 176.38 112.9 76701 58574 66189 71207 69072 86726 87434 80604 106670 96197 96354 106830 111850 89602 81524 95947 117630 106530 70813 53747 68211 71078 72141 86354 87646 83194 107160 96737 100060 107320 112220 93368 85494 96875 112120 101110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53041000 7818 567 7397 14810 11913 11913 1 9606 Homo sapiens -0.06052366732478731 EVDEGPSPPEQFTAVK Unmodified 1728.8206 0.82064524 3888 Q14331;E9PRR7 FRG1 Protein FRG1 yes no 0 0 0 2.5 0.5 1 1 52.382 52.431 3 4.2888E-08 15216 20230619_1882_Aki_TMTPro18x_K_F3 93.106 74.511 108710 86659 99141 103900 99482 116130 114970 111240 142330 97810 106170 95117 104710 78569 100960 103570 106730 99773 100440 79493 101550 103690 103830 116370 115840 113630 141840 99573 110490 96195 106680 82962 103060 103450 102010 94830 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 56492000 7819 3888 7398 14811;14812 11914;11915;11916 11916 3 9606 Homo sapiens -0.014612260808689825 EVDEKPASTPWGSK Unmodified 1529.7362 0.73618733 4304 V9HVZ6;Q92747;Q53GB6;A0A0K0K1L3;Q59GQ0;A0A1W2PNV4;Q92747-2;E9PF58 HEL-68;ARPC1A Actin-related protein 2/3 complex subunit 1A yes no 0 0 1 5 0.816 1 1 1 46.976 47.056 3 6.8801E-07 12492 20230619_1885_Aki_TMTPro18x_K_F5 135.45 117.09 130770 114390 136950 160690 202680 241970 199820 184550 207770 180830 187640 172130 165920 136960 167220 139090 156490 134410 121020 105070 139800 159400 205340 237080 201780 192380 210360 182760 192440 173900 170030 142570 169260 139610 149680 127790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238140000 7820 4304 7399 14813;14814;14815 11917;11918 11918 2 9606 Homo sapiens -0.007491321069664991 EVDEQMLAIQSK Oxidation (M) 1405.6759 0.67589525 983;2562;3176 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain no no 0 1 0 3 0.816 1 1 1 48.075 48.138 3 3.529E-07 13277 20230619_1882_Aki_TMTPro18x_K_F3 152.96 137.8 971380 847780 869750 945210 976490 898110 938270 906970 1004700 979460 1107700 947090 1006600 819640 1006800 1098200 1071100 1041000 897810 776880 893720 946260 1003600 912810 950560 928190 1023800 984960 1126200 959530 1030300 864560 1027800 1095600 1024000 989420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1209200000 7821 983;2562;3176 7400 14816;14817;14818 11919;11920;11921 11920 551 3 9606 Homo sapiens -0.010715657617083707 EVDEQMLAIQSK Unmodified 1389.681 0.68098063 983;2562;3176 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain no no 0 0 0 3.5 0.5 1 1 54.192 54.223 2 6.5824E-18 15871 20230619_1883_Aki_TMTPro18x_K_F4 283.24 218.75 209930 178910 215910 196970 145830 171410 178460 169910 176110 236170 243870 241480 250340 212950 215080 242990 255260 250270 194210 163940 217630 197240 157920 175320 178190 175550 182470 235170 247270 243890 253610 222210 221690 244040 243810 237650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1333800000 7822 983;2562;3176 7400 14819;14820 11922;11923 11923 2 9606 Homo sapiens 0.0017273810090046027 EVDEQMLNVQNK Unmodified 1445.682 0.68204326 3748;1486;1424;3870 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;Q1KSF8;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0 TUBB2B;DKFZp566F223;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A Tubulin beta-2B chain;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain no no 0 0 0 4.09 1.68 1 1 2 2 3 1 1 50.62 50.677 2;3 6.920299999999999E-32 14729 20230619_1881_Aki_TMTPro18x_K_F2 234.9 200.22 2437400 1926400 2107000 2293400 2250400 2605100 2490100 2468700 3051900 2784500 2883800 2832200 3114200 2617100 2711800 3167600 3098200 2851700 2250800 1767000 2171300 2290200 2335200 2607400 2514000 2539800 3070300 2799500 2976100 2866500 3152100 2735400 2788400 3155600 2958900 2712800 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 45049000000 7823 1424;1486;3748;3870 7401 14821;14822;14823;14824;14825;14826;14827;14828;14829;14830;14831 11924;11925;11926;11927;11928;11929 11925 6 9606 Homo sapiens -0.022970475301690385 EVDEQMLNVQNK Oxidation (M) 1461.677 0.67695789 3748;1486;1424;3870 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;Q1KSF8;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0 TUBB2B;DKFZp566F223;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A Tubulin beta-2B chain;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain no no 0 1 0 3.3 1.1 3 3 2 2 44.785 44.849 3 1.4286E-07 11673 20230619_1883_Aki_TMTPro18x_K_F4 163.12 135.26 2877500 2269900 2230600 2700600 3165700 2855000 2972100 2961300 3310800 3047300 3749500 3600200 3493200 3203000 3703300 3459900 3691100 3648100 2655200 2082100 2335900 2694000 3205900 2879800 3018100 3020600 3369900 3092200 3814900 3617500 3584500 3329500 3760000 3484600 3531500 3463200 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 9878100000 7824 1424;1486;3748;3870 7401 14832;14833;14834;14835;14836;14837;14838;14839;14840;14841 11930;11931;11932;11933;11934;11935;11936;11937 11936 892 8 9606 Homo sapiens -0.03541351392800607 EVDGLDVSK Unmodified 960.47639 0.47639081 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3 0 1 48.445 48.524 2 0.00051347 13470 20230619_1882_Aki_TMTPro18x_K_F3 133.13 88.442 500810 375900 416240 440940 523630 499300 487610 458180 697340 615540 659000 568820 626910 496820 577270 697250 748200 672770 462200 344830 431500 440790 534430 499860 500060 475140 696820 612540 675790 577600 638460 525660 597950 695670 713700 639530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 316710000 7825 3881 7402 14842 11938 11938 1 9606 Homo sapiens -0.005428329272831434 EVDIGIPDATGR Unmodified 1241.6252 0.62518031 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;A0A7I2V2Y2;A0A7P0TAY0 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 0 2.5 0.5 1 1 51.637 51.692 2 2.2737E-17 15201 20230619_1881_Aki_TMTPro18x_K_F2 224.68 204.35 157410 100850 130380 155950 144550 188710 167000 158460 197530 185040 205970 202710 197100 171590 179180 220630 198340 222660 145150 92858 135110 153260 149970 187490 167990 164710 199770 186170 210500 204000 200630 180600 183820 220910 189750 211370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2023299999.9999998 7826 3656 7403 14843;14844 11939 11939 1 9606 Homo sapiens 0.014032729755854234 EVDIYTVK Unmodified 965.50696 0.50696266 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3S6H7G3;A0A3Q8ATF5;Q5U8W9;A0A3Q8APW9;A0A3Q8B022;A0A3S6H7Y4;A0A3Q8B027;A0A3Q8BCJ2;A0A3Q8BCI7;A0A3S6H824;A0A3S6H950;A0A3S6H942;A0A3S6H7K8;A0A3Q8AIS2;A0A3Q8APY3;A0A3S6H960;A0A3Q8B4M4;Q59GT2;Q9NR22-2;Q9NR22 PRMT1;HRMT1L2;PRMT8 Protein arginine N-methyltransferase 1;Protein arginine N-methyltransferase 8 yes no 0 0 0 4.5 0.5 1 1 51.563 51.59 3 0.0021105 14412 20230619_1885_Aki_TMTPro18x_K_F5 105.14 56.339 224820 176470 214500 234920 216770 256020 240620 241230 261590 296080 298390 249980 320540 242270 233450 352190 324780 281180 207760 162060 218930 232670 225770 256890 241950 248900 266980 294860 304940 255920 322170 256050 244600 347820 309570 267980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205080000 7827 1536 7404 14845;14846 11940;11941 11941 2 9606 Homo sapiens 0.02282945457761798 EVDNFVDK Unmodified 964.45018 0.45017606 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 0 2 0 1 49.033 49.098 2 0.0094656 14026 20230619_1881_Aki_TMTPro18x_K_F2 101.65 47.241 87493 74695 81984 87914 97457 106750 107000 98393 140580 123030 122250 124580 128380 111630 107220 158880 154190 135290 80882 68488 84021 87951 100320 106340 108310 101760 140550 123130 126550 126030 129910 118020 112270 157420 146940 128810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99748000 7828 2181 7405 14847 11942 11942 1 9606 Homo sapiens -0.033471020987576594 EVDPDGRR Unmodified 942.45191 0.45190739 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;H0YI79;A0A994J6A0;A0A994J3G1;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 1 1 0 1 26.486 26.486 3 0.0052084 4644 20230619_1880_Aki_TMTPro18x_K_F1 79.809 55.655 9406.6 4480 13990 14564 22809 17929 15300 21482 14359 7307.1 15186 18800 10111 12972 14740 4741.2 18487 15960 8710.4 4188.8 13956 13907 22717 17948 15853 21307 14685 8488.6 15354 18350 10734 13125 15056 5560.1 17634 15049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15211000 7829 3212;3213 7406 14848 11943 11943 1 9606 Homo sapiens -0.02162048290142593 EVDPQGLR Unmodified 912.46649 0.46649483 3619;2880 P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96;K7EPK9;E5RHK8;H0YBC6;Q9UQ16-2;Q9UQ16-3;Q9UQ16;Q9UQ16-4;A0A8I5KXV5;B3KPF2;Q9UQ16-5;E5RIK2 DNM2;DNM3 Dynamin-2;Dynamin-3 no no 0 0 0 2 0 1 38.511 38.574 2 0.0075838 9139 20230619_1881_Aki_TMTPro18x_K_F2 107.19 62.78 104230 78051 93460 102270 111120 114550 110530 116740 163550 119800 139500 138450 139660 120650 133170 125140 160480 141610 96248 71679 96145 101440 114070 114960 113100 119170 162490 121570 144240 139100 142280 125280 136980 126640 153150 134390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117710000 7830 3619;2880 7407 14849 11944 11944 1 9606 Homo sapiens 0.006760238580113764 EVDRNQELLTR Unmodified 1371.7106 0.71064128 1944 A4D218;Q9Y6D9;Q9Y6D9-4;C9JJ38;C9JIR0 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes no 0 0 1 3 0 1 36.775 36.83 3 6.7795E-09 8289 20230619_1882_Aki_TMTPro18x_K_F3 154.28 114.36 39294 36525 40262 38444 52556 52700 44892 44634 51210 46488 52406 50769 52838 45474 42961 46304 54032 43076 36372 33446 40984 38871 53373 52053 45910 46196 51861 47031 53708 51165 53454 47114 44483 46341 51515 40988 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72030000 7831 1944 7408 14850 11945 11945 1 9606 Homo sapiens 0.039654381612763245 EVDRPGSK Unmodified 886.45084 0.45084476 3567;2399 B3KS36;B4DN06;F8WCR1;P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;B5MCW2;H7C422;H7C3M2 RPL3;rpl3 60S ribosomal protein L3 no no 0 0 1 4 0.816 1 1 1 31.107 31.182 3 0.013706 5970 20230619_1883_Aki_TMTPro18x_K_F4 68.657 49.877 85402 35149 139160 128230 243520 190870 157350 230360 125200 76478 157760 187640 94789 129820 175130 46269 180830 137500 79135 33002 138290 122550 241510 189090 162910 228240 130450 88791 157940 183350 102890 131210 176240 53409 172660 129790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132540000 7832 2399;3567 7409 14851;14852;14853 11946 11946 1 9606 Homo sapiens 0.003077373409610118 EVDVGLAADVGTLQR Unmodified 1541.8049 0.80493559 1433 M0R248;A0A384MR44;Q13011 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes no 0 0 0 4 0 1 56.25 56.258 2 0.010621 16758 20230619_1883_Aki_TMTPro18x_K_F4 84.892 65.105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7833 1433 7410 14854 11947 11947 1 9606 Homo sapiens 0.05570532192746214 EVDYSDSLTEK Unmodified 1284.5721 0.57214169 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;A0A2R8YF80;B4E0F1;B4DSI8;B3KNW7;A0A2R8Y523;A0A2R8Y5K3;K7EQF0;A0A2R8YFK5;K7EP28 SMARCA4 Transcription activator BRG1 yes no 0 0 0 2 0 1 49 49.065 2 5.48E-17 14001 20230619_1881_Aki_TMTPro18x_K_F2 189.72 134.66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7834 1348 7411 14855 11948 11948 1 9606 Homo sapiens -0.058761495977023515 EVDYSGLR Unmodified 937.45051 0.45051041 4680 Q9UKY7;A0A8I5KX85;Q9UKY7-2;D3DND1 CDV3 Protein CDV3 homolog yes no 0 0 0 3 0.816 1 1 1 42.353 42.416 2 2.3147E-10 10628 20230619_1882_Aki_TMTPro18x_K_F3 220.25 113.97 420650 317260 350100 388880 413260 432940 415200 407520 564200 475840 498470 485890 516960 411430 426220 555480 561100 523810 388230 291150 362650 387400 424570 433960 423020 419920 563520 477770 515090 490470 522700 434560 443150 553720 535290 497990 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 562640000 7835 4680 7412 14856;14857;14858 11949;11950 11950 2 9606 Homo sapiens -0.02071682378903006 EVEAQLPEK Unmodified 1041.5342 0.53424004 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A994J4Z2;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;Q59FZ6;A0A2R8YF80;A0A2R8YGP5;B4E0F1;B4DSI8;B3KNW7;A0A2R8Y523;A0A2R8YFV8;A0A2R8Y4R6;A0A2R8YCY3 SMARCA4 Transcription activator BRG1 yes no 0 0 0 3 0 1 46.521 46.599 3 0.072264 12583 20230619_1882_Aki_TMTPro18x_K_F3 52.725 21.295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7836 1348 7413 14859 11951 11951 1 9606 Homo sapiens 0.015134289981460824 EVEAVIPDHCIFASNTSALPISEIAAVSK Unmodified 3067.5536 0.55360186 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 6 0 1 63.037 63.085 4 2.08E-09 19539 20230619_1886_Aki_TMTPro18x_K_F6 112.39 99.954 26045 26897 32132 31072 28363 33449 34006 31690 28838 34501 31706 23707 27242 24805 40776 24453 21757 25816 24169 24642 32077 31079 29889 33604 33813 32573 29813 34379 32181 24601 28573 25541 40088 24712 21029 24491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170600000 7837 2908 7414 14860 11952 11952 1 9606 Homo sapiens 0.10252720224480072 EVEEDEYK Unmodified 1039.4346 0.43458558 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;A0A7P0TBC2 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 1.67 0.471 1 2 41.514 41.553 2;3 1.4975E-05 10552 20230619_1881_Aki_TMTPro18x_K_F2 143.01 107.13 145520 64371 169000 192570 263790 298940 213860 257550 223840 159840 275690 347090 235740 240920 297100 121410 311600 308410 134350 60093 171310 184990 265140 292910 218970 263250 229190 172480 279300 339830 245020 245640 300820 135010 297980 290960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 369280000 7838 3452 7415 14861;14862;14863 11953;11954 11954 2 9606 Homo sapiens -0.08355433406472912 EVEEEPGIHSLK Unmodified 1365.6776 0.67760981 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 2.5 1.12 1 1 1 1 43.572 43.621 3 3.0181E-24 11165 20230619_1882_Aki_TMTPro18x_K_F3 225.15 161.52 581750 491850 565350 559610 662910 758360 700780 687050 801680 721150 759410 763010 814080 686960 769660 889880 854740 812060 537920 450850 577200 562340 682180 750140 707400 707560 809220 728500 783640 770470 827090 721730 788770 886310 816690 772280 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 942340000 7839 874 7416 14864;14865;14866;14867 11955;11956;11957;11958 11957 4 9606 Homo sapiens 0.009398113185625334 EVEEISLLQPQVEESVLNLGK Unmodified 2352.2424 0.2424217 2138 A8K9K6;O00567;A0PJ92;A0A494C128;Q5JXT2 NOP56 Nucleolar protein 56 yes no 0 0 0 4.67 0.471 1 2 64.752 64.785 3;4 6.3431E-08 20333 20230619_1883_Aki_TMTPro18x_K_F4 102.37 91.99 12639 9837.1 13402 10847 12279 16484 14881 19542 14078 17827 13626 17792 16876 15456 19552 19251 18861 19400 11689 9017.4 13523 10959 12928 16302 14845 19680 14399 18089 14185 17972 17256 16217 19795 19295 18056 18423 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 371250000 7840 2138 7417 14868;14869;14870 11959;11960 11959 2 9606 Homo sapiens 0.12039018701761961 EVEELILTESK Unmodified 1288.6762 0.67621283 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;Q9BZZ5-5;Q9BZZ5-6;Q9BZZ5-3;H0YER7 API5 Apoptosis inhibitor 5 yes no 0 0 0 2 0.816 1 1 1 61.167 61.173 3 0.00165 18944 20230619_1880_Aki_TMTPro18x_K_F1 62.894 45.508 61574 49458 56311 69131 59392 84735 67238 65074 65703 74097 73431 85952 96101 73422 84538 87767 78756 104740 56889 45440 57792 68347 61806 83980 67301 68097 67403 74757 76068 86261 96736 76971 85874 88902 75589 99207 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 529030000 7841 4478 7418 14871;14872;14873 11961;11962;11963 11962 3 9606 Homo sapiens 0.04342177229796107 EVEELILTESKK Unmodified 1416.7712 0.77117585 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;Q9BZZ5-5;Q9BZZ5-6;Q9BZZ5-3;H0YER7 API5 Apoptosis inhibitor 5 yes no 0 0 1 5 0 1 58.039 58.095 3 1.4984E-05 17136 20230619_1885_Aki_TMTPro18x_K_F5 132.06 102.25 111480 104820 110590 111570 110700 122750 118680 126130 135110 139590 125200 123240 136040 104290 122490 127360 128300 123030 103170 95989 112420 112340 115210 123400 119750 128930 136410 139830 129380 125180 137780 109490 125140 127370 122660 116920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83268000 7842 4478 7419 14874 11964 11964 1 9606 Homo sapiens 0.07946110700959252 EVEESLER Unmodified 989.46655 0.46655441 2507 D6RE80;D6REW7;B4DJP8;B4DQT1;B4DUB2;D3DVP1;B4DVN3;E7ESC7;Q7L5Y9 MAEA Macrophage erythroblast attacher yes no 0 0 0 1 0 1 39.025 39.025 2 0.0070336 9647 20230619_1880_Aki_TMTPro18x_K_F1 100.02 6.5886 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7843 2507 7420 14875 11965 11965 1 9606 Homo sapiens -0.028600209326668846 EVEETDEMDQVELVDFDPNQER Oxidation (M) 2681.1287 0.12865009 3532 P31689;B7Z5C0;Q9NXZ8 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 yes no 0 1 0 1 0 2 58.883 58.883 3 2.6522E-12 18043 20230619_1880_Aki_TMTPro18x_K_F1 129.32 125.91 9895.3 6908.7 11680 14500 13145 11721 10539 10680 12994 9853.6 16211 16889 15893 11150 13404 20567 13708 16174 9155.1 6387.2 11749 13964 13445 12035 10863 10975 13210 10219 16467 16656 16094 12184 13733 20247 13130 15399 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67336000 7844 3532 7421 14876;14877 11966;11967 11966 2194 2 9606 Homo sapiens -0.14466908984149995 EVEETDEMDQVELVDFDPNQER Unmodified 2665.1337 0.13373547 3532 P31689;B7Z5C0;Q9NXZ8 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 yes no 0 0 0 1 0 1 61.878 61.878 3 4.4797E-31 19241 20230619_1880_Aki_TMTPro18x_K_F1 212.47 201.17 16198 15277 17193 17190 11782 15628 17747 16544 19262 20534 17457 19933 22763 17845 17003 29424 21592 23381 15000 13997 17305 17192 12842 15943 17598 16952 19480 20517 18242 20202 22787 19086 17715 29003 20627 22265 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70286000 7845 3532 7421 14878 11968 11968 1 9606 Homo sapiens -0.13222605121518427 EVEFGGPAPR Unmodified 1057.5193 0.51925868 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1;F8VU51;H0YI23;B4DMQ9 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 0 3 0 1 43.124 43.19 2 8.3174E-09 11005 20230619_1882_Aki_TMTPro18x_K_F3 194.22 162.85 277600 217870 267810 274720 297660 310830 325290 299790 379440 334070 343950 348630 357780 322880 343070 377470 370880 386110 256550 199970 273360 273260 307480 311370 327960 308010 381990 336370 355230 352430 364180 336730 350840 378850 354690 366580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107230000 7846 3610 7422 14879 11969;11970 11970 2 9606 Homo sapiens -0.00720018079186957 EVEIAYSDVAK Unmodified 1222.6081 0.60813326 2612 B4DWC4;Q6FIC5;Q9Y696;B3KTR3 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 0 0 3 0.707 1 2 1 52.548 52.592 2;3 6.3526E-12 15287 20230619_1882_Aki_TMTPro18x_K_F3 242.12 194.27 359520 287800 293890 297390 261970 346030 311360 324440 433470 469140 449760 514050 623070 488960 343300 727130 593430 587140 331890 263640 303590 300370 276820 345740 314940 336730 435730 467800 468300 519230 617100 517720 369940 717830 565320 559180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1572199999.9999998 7847 2612 7423 14880;14881;14882;14883 11971;11972;11973 11972 3 9606 Homo sapiens 0.005733523697927012 EVELNELEPEK Unmodified 1327.6507 0.65072636 1704 P08195-4;P08195-5;P08195;P08195-3;A0A7P0Z4P5;A0A7P0TAN7;A0A7P0Z4A0;A0A7P0T9F7;F5GZS6;P08195-2;A0A7P0TBF8;B4E2Z3;A0A7P0TAS6;A0A024R599;A0A7P0T8U7;A0A7P0T8F1;H0YH36;A0A7P0TAT7;F5H0E2;H0YFS2;F5H867;A0A7P0T853;B4E3E4 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 0 1 0 1 53.918 53.918 2 0.00025927 15965 20230619_1880_Aki_TMTPro18x_K_F1 131.82 108.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7848 1704 7424 14884 11974 11974 1 9606 Homo sapiens 7.027073934295913E-06 EVELVSE Unmodified 803.39126 0.3912642 1807 O60832;A0A8Q3WLC8;A0A8Q3SIY6;A0A8Q3WLD1;A0A8Q3WLG7;A0A8V8TKY9 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 0 0 0 1 0 1 51.396 51.396 2 0.021408 14923 20230619_1880_Aki_TMTPro18x_K_F1 103.28 103.28 28142 22473 26364 29892 31765 49545 39337 40900 46745 36586 38665 48777 42527 32810 39989 43585 54334 52506 26005 20637 27060 29818 32896 48356 39435 42245 46847 37589 40292 48397 43161 34960 41516 44109 51835 49783 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63245000 7849 1807 7425 14885 11975 11975 1 9606 Homo sapiens -0.01829578393085285 EVEMGPFK Unmodified 935.44225 0.44225391 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3;A0A384MDT0;O75155-2;O75155 CAND1;CAND2 Cullin-associated NEDD8-dissociated protein 1;Cullin-associated NEDD8-dissociated protein 2 yes no 0 0 0 4 0.816 2 2 2 52.45 52.502 2;3 0.0027589 14830 20230619_1885_Aki_TMTPro18x_K_F5 121.62 65.608 107780 97781 102960 110020 93841 118750 112990 108730 132360 116600 111310 105770 108100 96311 119060 132060 121580 126710 99689 89599 104920 110240 98860 119180 113410 112000 132870 117130 115050 107610 111000 101540 121090 131790 116330 120390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 335980000 7850 2126 7426 14886;14887;14888;14889;14890;14891 11976;11977 11977 2 9606 Homo sapiens -0.02804952619874257 EVEPALELLEPIDQK Unmodified 1721.9087 0.90873196 1080 A0A0S2Z3X8;P31150;B4E070 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 2.5 1.12 1 1 1 1 63.472 63.483 3 3.13E-34 20172 20230619_1881_Aki_TMTPro18x_K_F2 210.38 188.75 190950 156940 182890 235810 133640 179480 158490 172960 232350 231120 232120 297650 272240 249640 212370 295780 301210 348690 176510 144300 186030 230760 143800 185490 160780 178850 232570 232510 240280 297330 273960 261490 222380 299180 287670 330450 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1310900000 7851 1080 7427 14892;14893;14894;14895 11978;11979;11980 11979 3 9606 Homo sapiens 0.07665394509740509 EVEPEPTEDK Unmodified 1171.5245 0.52446322 2657 Q6IBR8;B5BU01;P20042;Q3B7I9;Q59GZ3 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 1 0 1 40.404 40.404 2 3.1327E-11 10258 20230619_1880_Aki_TMTPro18x_K_F1 176.33 132.81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7852 2657 7428 14896 11981 11981 1 9606 Homo sapiens -0.054438037979025466 EVEPEPTEDKDLEADEEDTR Unmodified 2345.003 0.0030388701 2657 Q6IBR8;B5BU01;P20042;Q3B7I9;Q59GZ3 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 1 1 0 1 44.958 44.958 4 3.1889E-16 12261 20230619_1880_Aki_TMTPro18x_K_F1 164.94 157.32 112650 86652 108200 126100 108800 95514 118480 112650 101970 147520 142820 110370 121410 86007 150970 93137 95861 58673 104100 79664 110370 123670 112970 99350 118450 114870 106630 145950 143530 112880 125770 89955 149630 91783 91994 56230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132750000 7853 2657 7429 14897 11982 11982 1 9606 Homo sapiens -0.11566252777993213 EVEQFTQVAK Unmodified 1177.5979 0.59790293 2102 H3BPJ9;A8K761;O96000;O96000-2 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes no 0 0 0 4.5 0.5 1 1 50.175 50.23 3 0.00037087 14101 20230619_1883_Aki_TMTPro18x_K_F4 109.15 54.538 156000 133030 132680 159360 192340 197210 186370 173900 224690 164100 180330 197010 201180 176170 188520 198490 192480 192170 144110 122000 137780 159230 194890 196060 189320 179050 224810 167520 188150 197810 204110 183520 192190 198750 184120 182600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 295330000 7854 2102 7430 14898;14899 11983;11984 11983 2 9606 Homo sapiens 0.016207894352419316 EVEQLIK Unmodified 857.48583 0.48583328 3505 P25789;H0YN18;B2RDG0;P25789-2 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type yes no 0 0 0 4 0 1 50.711 50.743 3 0.012881 14320 20230619_1883_Aki_TMTPro18x_K_F4 87.284 25.723 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7855 3505 7431 14900 11985 11985 1 9606 Homo sapiens 0.05138980148922201 EVESMGAHLNAYSTR Oxidation (M) 1679.7573 0.75733347 3533 P31930 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 0 1 0 4 0 1 36.563 36.609 3 3.7319E-08 8183 20230619_1883_Aki_TMTPro18x_K_F4 138.24 125.63 20696 15463 21733 24401 35741 35403 28133 28844 30719 21575 28423 30032 30332 24077 24695 24899 32050 30965 19135 14232 22213 24030 35777 34808 28883 29722 31035 22468 29360 29905 30624 25086 25615 25349 30586 29350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14707000 7856 3533 7432 14901 11986 11986 2197 1 9606 Homo sapiens -0.05535490069723892 EVESPYEVHDYIR Unmodified 1634.7577 0.75765105 288 Q6Y7W6;Q6Y7W6-5;Q6Y7W6-4;A0A024R4A5;Q6Y7W6-3;I1E4Y6;A0A7I2V361;A0A7I2V3H0;A0A7I2V516;A0A7I2V3H7 GIGYF2;TNRC15 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 0 0 0 2.5 0.5 1 1 46.294 46.373 3 9.5181E-05 12506 20230619_1882_Aki_TMTPro18x_K_F3 84.753 74.119 104550 92883 113070 104580 103250 140610 118820 103150 144530 119560 131820 145510 148220 138880 131900 148690 141030 140150 96793 85118 113990 105150 108660 138550 119680 108460 145200 120870 136650 146300 150070 143890 135010 148760 134850 133210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154080000 7857 288 7433 14902;14903 11987 11987 1 9606 Homo sapiens -0.034337470782475066 EVETYHR Unmodified 932.43519 0.4351947 573 A0A024R9G7;Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 yes no 0 0 0 1.5 0.5 1 1 28.737 28.774 3 0.00083055 5246 20230619_1881_Aki_TMTPro18x_K_F2 148.33 76.094 15195 11946 22536 22635 22041 21620 18911 22789 18275 17915 27890 28529 24844 21800 24179 12442 24980 19616 14104 11021 22268 21953 22803 21955 19265 23072 19023 18677 28035 28232 25415 22212 24573 13103 23856 18575 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12435000 7858 573 7434 14904;14905 11988 11988 1 9606 Homo sapiens -0.03372549176094708 EVEVEVESMDK Oxidation (M) 1308.5755 0.57551251 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 yes no 0 1 0 1 0 1 46.41 46.41 3 0.030804 12889 20230619_1880_Aki_TMTPro18x_K_F1 47.915 27.452 59568 46483 52706 71437 69238 72777 74125 73821 85750 83835 97273 98889 95724 84332 81128 90549 94975 93856 55012 42760 54478 70053 70736 73494 74801 75627 87143 84646 99185 99203 97071 87778 83569 91064 90730 89114 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25854000 7859 1229 7435 14906 11989 11989 767 1 9606 Homo sapiens -0.06643222815364425 EVEVEVESMDK Unmodified 1292.5806 0.58059789 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 1 0 1 52.482 52.482 2 3.6383E-05 15371 20230619_1880_Aki_TMTPro18x_K_F1 130.94 90.589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7860 1229 7435 14907 11990 11990 1 9606 Homo sapiens -0.053989189527555936 EVEVQEPR Unmodified 984.48762 0.4876242 4744 Q9Y586;F1T0A2;B2R805;Q13394 MAB21L2;MAB21L1 Protein mab-21-like 2;Protein mab-21-like 1 yes no 0 0 0 2 0.816 1 1 1 36.326 36.364 2 0.010387 8593 20230619_1880_Aki_TMTPro18x_K_F1 98.933 49.837 108330 64580 114620 97968 98660 108380 104240 103690 131880 126460 188340 195750 160480 154690 158930 88150 209350 192680 100040 59470 115550 96340 103910 108670 105740 106900 134890 128690 189390 193980 164730 157440 164000 95757 199700 181970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178430000 7861 4744 7436 14908;14909;14910 11991 11991 1 9606 Homo sapiens -0.005240108331349802 EVEYFTGALAR Unmodified 1254.6245 0.62445203 2966 F5GZZ0;S4R3T5;F5H5X2;Q6NS38 ALKBH2 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 yes no 0 0 0 5 0 1 55.982 56.046 2 0.0010966 16303 20230619_1885_Aki_TMTPro18x_K_F5 101.82 81.654 39875 34851 43699 45662 43899 46979 49103 46745 55488 51032 47336 49967 63214 51563 51765 57560 57639 58837 36916 31987 44088 45242 45701 47402 49401 47896 55862 51331 49663 50828 63461 53471 53194 57805 55100 55866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24282000 7862 2966 7437 14911 11992 11992 1 9606 Homo sapiens 0.0073247832656306855 EVFDNDGKPR Unmodified 1175.5571 0.55710075 1092 A0A0S2Z4B5;Q08209;A0A0S2Z4C6;Q08209-2;Q08209-3;Q08209-4 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes no 0 0 1 3.5 0.5 1 1 39.973 40.023 3 0.00055336 9532 20230619_1883_Aki_TMTPro18x_K_F4 107.11 84.785 285620 230800 262760 253910 328560 320520 327090 339060 455620 326430 392480 349610 366290 302890 337020 393510 430990 368780 263910 211540 269720 255570 335970 319640 333770 344620 453850 331530 404150 352630 373350 318760 348700 392450 411030 350760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 350360000 7863 1092 7438 14912;14913 11993;11994 11994 2 9606 Homo sapiens -0.023655518843725076 EVFEDAAEIR Unmodified 1177.5615 0.56151742 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 0 2 0.816 1 1 1 51.134 51.173 2 1.0278E-06 14945 20230619_1881_Aki_TMTPro18x_K_F2 179.28 128.41 846510 695230 693060 790740 731490 834920 804840 838800 973980 978980 931280 947690 923730 1075300 600460 1476200 612150 1067400 781590 637350 717990 791450 759580 841150 812580 860270 981280 981230 956740 968940 929570 1124200 622130 1451500 588740 1016500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 10851000000 7864 1658 7439 14914;14915;14916 11995;11996 11996 2 9606 Homo sapiens -0.020160874614930435 EVFEFRPELVNDDDEEADDTR Unmodified 2539.0987 0.09867059 2690 B7Z592;Q8WU90;Q8WU90-2 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes no 0 0 1 1.5 0.5 1 1 57.463 57.47 3 7.753899999999999E-46 17447 20230619_1880_Aki_TMTPro18x_K_F1 264.49 248 85696 66166 80195 98676 67191 85553 81607 79778 91021 101900 90294 89892 112010 87846 76042 102150 95001 99488 79171 60846 81846 96744 71318 87323 81766 82537 92263 101430 93584 91716 111880 91489 79147 102200 90744 94506 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276410000 7865 2690 7440 14917;14918 11997 11997 1 9606 Homo sapiens -0.10931479867076632 EVFEMATR Unmodified 981.45897 0.45896661 220 P61586;A0A024R324;B4DKN9;P08134;A0A024R0C8;Q9BVT0;Q5JR08;A0A7I2YQV1;A0A0B6XK12 RHOA;RHOC;ARHA Transforming protein RhoA;Rho-related GTP-binding protein RhoC yes no 0 0 0 3.5 0.5 1 1 48.657 48.715 2 0.0014728 13358 20230619_1883_Aki_TMTPro18x_K_F4 142.08 99.165 1093200 932720 1010200 992000 1051600 1223100 1119700 1131700 1505000 1378000 1290700 1371900 1427900 1139700 1225800 1477400 1378300 1502100 1010500 854430 1033700 1000500 1092300 1217500 1136900 1168700 1503000 1379700 1340700 1384800 1443000 1201700 1259900 1479800 1318200 1426000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 805590000 7866 220 7441 14919;14920 11998;11999 11999 2 9606 Homo sapiens -0.032504517339248196 EVFGDTLNESR Unmodified 1265.5888 0.58879481 1186 B3KY04;A0A140VJM4;Q96CX2;B4DQJ9;Q6ZWB6 KCTD12;KCTD8 BTB/POZ domain-containing protein KCTD12;BTB/POZ domain-containing protein KCTD8 yes no 0 0 0 2 0 1 47.637 47.708 2 9.2335E-06 13370 20230619_1881_Aki_TMTPro18x_K_F2 149.17 129.9 42941 36165 41445 45255 58566 71484 71413 70885 97276 72638 88528 86784 74936 72035 74441 74011 77962 86625 39702 33181 42540 45297 59915 70246 72000 72467 97155 73797 90626 86958 76945 74868 75902 75060 74619 82112 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142420000 7867 1186 7442 14921 12000 12000 1 9606 Homo sapiens -0.03337603921090704 EVFGDTLNESRDPDRPPER Unmodified 2228.0458 0.045787579 1186 B3KY04;A0A140VJM4;Q96CX2 KCTD12 BTB/POZ domain-containing protein KCTD12 yes no 0 0 2 2 0.816 1 1 1 41.781 41.828 4 1.0365E-14 10383 20230619_1882_Aki_TMTPro18x_K_F3 163.11 143.02 183350 144020 182630 184200 244050 287100 272640 285100 325370 234260 277760 264260 281500 247820 250040 265850 305280 309470 169490 132200 186600 184080 249580 282330 274750 289850 326220 240560 287270 266520 285810 257160 257940 269270 291580 293460 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 737730000 7868 1186 7443 14922;14923;14924 12001;12002;12003 12003 3 9606 Homo sapiens -0.019113483485853067 EVFGSGTACQVCPVHR Unmodified 1802.8192 0.81922222 2404 M0QZP4;B3KSI3;Q53EW7;M0QZ10;M0QXF9;O15382-2;O15382 BCAT2 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, mitochondrial yes no 0 0 0 7 0 1 42.395 42.47 3 3.8692E-10 10265 20230619_1887_Aki_TMTPro18x_K_F7 153.94 143.6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7869 2404 7444 14925 12004 12004 1 9606 Homo sapiens -0.05007461922264156 EVFIPQDGK Unmodified 1031.5288 0.52876073 2568 B4DPV7;P49589-3;A8K067;B4DKY1;A0A024RCG3;P49589-2;P49589;A8MVQ3;Q59HE5;E9PRS8 CARS Cysteine--tRNA ligase, cytoplasmic yes no 0 0 0 4.5 0.5 1 1 50.387 50.418 2 0.011646 14176 20230619_1883_Aki_TMTPro18x_K_F4 90.108 39.042 67187 51280 60189 60119 58077 62980 59614 54313 83634 75023 82618 85167 78785 64417 69727 92931 85775 86908 62046 47037 61682 60037 60588 63293 60765 56671 83770 75046 84643 85309 80100 68632 72080 92518 81921 82605 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33008000 7870 2568 7445 14926;14927 12005;12006 12005 2 9606 Homo sapiens 0.014257502063401262 EVFPVLAAK Unmodified 972.56442 0.56441796 3981 Q4W4Y1;Q8WUM4;F8WDK9 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 8 0 1 58.73 58.772 2 0.0016704 17280 20230619_1888_Aki_TMTPro18x_K_F8 127.56 67.128 57944 46614 50669 54658 52062 70365 69901 58036 72297 57770 48341 44152 47797 42194 66580 61277 54187 50411 53518 42748 52152 54740 54552 69648 69461 60155 72530 58031 50728 45407 49708 44589 66660 60682 51940 48009 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43287000 7871 3981 7446 14928 12007 12007 1 9606 Homo sapiens 0.0770383245398989 EVFSMAGVVVR Unmodified 1192.6274 0.62742892 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;M0R2T0;B4DEG4;M0R0N3;M0QYQ7 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 2 0 1 58.731 58.744 2 2.8762E-12 18084 20230619_1881_Aki_TMTPro18x_K_F2 211.56 180.56 132310 89719 107830 119980 102380 153540 133720 140370 174130 161230 133420 151110 184790 164010 136020 200720 193360 216020 122020 82448 111620 119090 108070 152270 134230 144800 173560 161610 141130 154320 184790 170720 142690 201760 184610 204930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 283710000 7872 3194;3631 7447 14929 12008 12008 1 9606 Homo sapiens 0.03882030179738649 EVGDGTTSVVIIAAELLK Unmodified 1814.0037 0.0036949795 3470 P17987;E7ERF2;F5H136;F5H726;F5H676 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 6.83 0.687 2 3 1 69.636 69.666 2;3 9.3211E-48 20801 20230619_1887_Aki_TMTPro18x_K_F7 287.04 230.26 63209 37351 47752 58961 45544 52280 47588 42286 63093 48970 53326 56495 60040 51704 63617 62770 50953 72572 58228 34415 49819 57629 47624 53120 48338 44126 62970 49411 55504 56860 61226 54089 63932 63448 49024 68746 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 665160000 7873 3470 7448 14930;14931;14932;14933;14934;14935 12009;12010;12011;12012;12013 12011 5 9606 Homo sapiens 0.1292532798099728 EVGEAFTILSDPK Unmodified 1404.7137 0.71366097 1609;2515 B4DKK3;Q99615;A0A6I8PU73;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;K7ER44 DNAJC7 DnaJ homolog subfamily C member 7 no no 0 0 0 5.5 0.5 1 1 61.793 61.845 3 5.1798E-11 18718 20230619_1885_Aki_TMTPro18x_K_F5 145.31 115.38 127480 102630 114900 121520 108280 134140 121670 126010 149400 153100 138330 124700 148710 114700 127490 166720 138270 148360 117770 94125 117710 121350 113540 134480 122790 129990 150270 152420 142790 127620 150370 121460 130840 165550 132260 141070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 406440000 7874 2515;1609 7449 14936;14937 12014 12014 1 9606 Homo sapiens 0.027492684954268043 EVGEHLVSIK Unmodified 1109.6081 0.60807369 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 5.5 0.5 1 1 45.533 45.615 3 0.00017088 11885 20230619_1885_Aki_TMTPro18x_K_F5 120.06 72.995 53757 40804 47441 55440 53561 59918 66116 59542 77880 59743 65604 70594 68102 64978 59361 75641 76741 84110 49637 37485 48871 54828 55517 60226 66256 60887 78116 60741 68026 70996 69086 67751 61568 76264 73309 79771 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124000000 7875 3299 7450 14938;14939 12015 12015 1 9606 Homo sapiens 0.05765397160462271 EVGEHVVSVR Unmodified 1109.5829 0.58292157 3886 Q14315;Q14315-2;Q59H94 FLNC Filamin-C yes no 0 0 0 6.5 0.5 1 1 46.227 46.312 3 0.07138 11858 20230619_1887_Aki_TMTPro18x_K_F7 41.399 27.5 812390 788700 839230 616380 712410 692020 748810 683060 886090 202120 171760 139070 192240 115200 503940 242600 216020 175970 752280 720520 846800 639120 750350 694870 756970 685870 864310 229390 211280 143960 210180 126540 489600 238820 209190 167990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 269010000 7876 3886 7451 14940;14941 12016;12017 12017 2 9606 Homo sapiens 0.03251342357907561 EVGETLLYYGCR Unmodified 1458.6813 0.68131498 1810 P16435;Q59ED7;A8K3B4;B2R6E5;Q63HL4;A0A8V8NE24;H0Y4R2;B4DJI8;B4DDH3;B4DKM8;E7EMD0 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase yes no 0 0 0 5.5 0.5 1 1 55.829 55.898 2 1.5137E-13 16401 20230619_1886_Aki_TMTPro18x_K_F6 216.45 198.63 44346 36076 41749 45214 39066 44698 45336 39283 48463 55721 48710 50168 58386 49183 46919 62729 56499 67864 40984 33105 42609 44898 40975 45118 45443 40971 49265 55266 50393 51146 58743 51505 48532 63052 54044 64361 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72145000 7877 1810 7452 14942;14943 12018 12018 1 9606 Homo sapiens -0.02967842179236868 EVGIQEIHHK Unmodified 1188.6251 0.62512073 4538 Q9H9T3-2;Q9H9T3;B4DXV1;B4DPB7;B4DKA4;Q9H9T3-4;Q9H9T3-5;H0YAP7 ELP3 Elongator complex protein 3 yes no 0 0 0 4.5 0.5 1 1 36.607 36.676 4 0.0022427 8209 20230619_1883_Aki_TMTPro18x_K_F4 89.548 56.323 50536 37091 50827 49872 64461 61454 62639 54551 67445 56024 73417 71671 66376 52425 65715 69698 72312 72587 46701 34075 51799 49461 65745 61123 63395 56273 68617 57034 74730 71431 67910 55635 67222 69911 69126 68912 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79179000 7878 4538 7453 14944;14945 12019 12019 1 9606 Homo sapiens 0.03835317766265689 EVGMIDGK Oxidation (M) 863.40587 0.4058684 4794 yes no 0 1 0 4 0 1 45.546 45.59 3 0.062824 12007 20230619_1883_Aki_TMTPro18x_K_F4 42.599 9.083 + 49953 40080 48139 49906 52666 51459 58809 53418 63890 62325 66856 57552 56671 50741 56154 59625 74537 58200 46170 36779 49127 49622 54458 51985 59087 54687 64906 62367 67948 58434 58175 53028 58137 59691 71026 55354 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20798000 7879 4794 7454 14946 12020 12020 2914 1 9606 Homo sapiens -0.031298295165811396 EVGNLYDMFHTR Unmodified 1480.6769 0.67689831 4733 Q9Y3Z3;Q9Y3Z3-4;A0A2R8YCS7;A0A2R8YD90;A6NDZ3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes no 0 0 0 6.5 0.5 1 1 55.753 55.821 3 0.00068881 16121 20230619_1887_Aki_TMTPro18x_K_F7 73.245 61.269 39654 39094 41532 42793 33372 48880 42640 41920 52687 45958 46889 43472 51935 42766 42255 51486 55930 53098 36728 35804 41934 43003 35662 48788 42774 43418 52856 46183 48568 44246 52392 44614 43941 51661 53362 50426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58182000 7880 4733 7455 14947;14948 12021 12021 1 9606 Homo sapiens -0.04421306602148434 EVGRFEK Unmodified 863.45012 0.45011648 2353 Q53GG3;B3KN57;B3KML1;O60749;O60749-2 SNX2 Sorting nexin-2 yes no 0 0 1 5.5 0.5 1 1 38.405 38.492 3 0.054861 8939 20230619_1886_Aki_TMTPro18x_K_F6 64.567 36.144 108950 83312 106820 101330 129840 117300 118350 122190 135140 120420 150870 137070 133010 110570 130190 117140 163690 143570 100680 76445 108970 101100 132550 117590 120560 124420 137270 122310 153170 137530 136190 115330 134200 119140 156160 136160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72567000 7881 2353 7456 14949;14950 12022 12022 1 9606 Homo sapiens 0.012929426918958598 EVGSIIGK Unmodified 801.45962 0.45961853 3930;3929;2914 Q15365;Q53SS8;F8VTZ0;H3BSP4;C9JTY5;A0A024R2Y0;Q7Z4Y9;C9J0A4;C9JZY3;C9J5V4;C9K0A2;C9JSA6;C9J7A9;C9IZV9;F8WC71;P57723-2;P57723;E9PFP8;P57721-4;P57721;J3QT27;Q5MJP6;P57721-2;P57721-3;P57721-5;Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DLC0;F8W0G4;F8W1G6 PCBP1;PCBP2;PCBP4;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 4;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 no no 0 0 0 7 0.816 1 1 1 49.569 49.648 3 0.010359 13388 20230619_1888_Aki_TMTPro18x_K_F8 74.127 30.881 247810 187400 177730 220570 231550 260080 270580 230360 310760 284980 316390 326040 310070 254060 247260 336660 327490 262920 228490 171910 187490 220490 237540 259340 271590 238970 314420 286400 324050 326710 313680 268680 257440 332640 312110 250740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1418900000 7882 3929;2914;3930 7457 14951;14952;14953 12023 12023 1 9606 Homo sapiens 0.050947109774256205 EVGVYEALK Unmodified 1006.5335 0.53351176 3570 V9HWF2;P40925;P40925-3;A0A5K1VW95;P40925-2;B9A041;B8ZZ51 HEL-S-32;MDH1 Malate dehydrogenase;Malate dehydrogenase, cytoplasmic yes no 0 0 0 5 0 1 52.713 52.785 3 0.00046341 14931 20230619_1885_Aki_TMTPro18x_K_F5 96.936 39.337 99785 67686 75715 96647 72605 119130 102470 108410 167210 105220 95812 130290 146270 133570 90327 184330 172380 195850 91986 62246 79060 95451 76960 118360 103500 111390 163680 107450 104030 131300 145240 140320 97888 184740 164300 185810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 320190000 7883 3570 7458 14954 12024 12024 1 9606 Homo sapiens 0.030506343490742438 EVGWVQQVPNATTPPATLPSSGP Unmodified 2332.1699 0.16992546 1285 A0A1K0FUB6;Q8WWM9;K7EIM9 CYGB Cytoglobin yes no 0 0 0 7 0 1 62.581 62.617 3 1.9982E-08 18968 20230619_1887_Aki_TMTPro18x_K_F7 104.38 94.853 101100 65725 78081 80079 58994 83925 103940 83347 119250 110980 71189 79009 119240 71170 83753 124020 110400 92887 93189 60352 81002 79762 64206 84521 102570 85963 118780 109740 77443 81386 118340 76593 87471 121900 105250 88618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 914420000 7884 1285 7459 14955 12025 12025 1 9606 Homo sapiens 0.057127294188376254 EVHLGACGALK Unmodified 1153.5914 0.59137776 1594 O60716;H0YC95;O60716-3;O60716-2;Q68DU0;C9JZR2;A0A669KB05;O60716-5;O60716-11;O60716-10;O60716-9;O60716-17;Q96FS1;O60716-21;O60716-19;O60716-13;O60716-18;O60716-6;O60716-8;O60716-4;O60716-7;A0A669KB62;O60716-20;O60716-22;O60716-23;O60716-16;O60716-24;O60716-12;O60716-15;O60716-14;Q7KZJ3;O60716-26;A0A024R4Z0;O60716-25;O60716-27;O60716-29;O60716-31;A0A024R4Y7;O60716-32;O60716-28;O60716-30;E9PKY0 CTNND1;DKFZp781O2021 Catenin delta-1 yes no 0 0 0 7.5 0.5 1 1 43.427 43.471 3 2.1949E-05 10701 20230619_1887_Aki_TMTPro18x_K_F7 139.86 96.576 155350 115110 148720 143130 139890 178190 160960 162770 212590 112110 92298 94724 94756 86596 103160 114750 124100 87760 143520 105660 151490 142730 146860 177090 162600 165970 208570 115700 100510 96725 97174 91028 105950 113330 118280 83775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116310000 7885 1594 7460 14956;14957 12026 12026 1 9606 Homo sapiens 0.02072573002851641 EVIAEEEPPTVTEPLPENR Unmodified 2148.0586 0.058643676 3790;4031 Q5CZB5;Q02952-3;Q02952-2;Q02952 DKFZp686M0430;AKAP12 A-kinase anchor protein 12 no no 0 0 0 1.5 0.5 1 1 53.015 53.032 3 1.1508E-15 15579 20230619_1880_Aki_TMTPro18x_K_F1 168.64 158.72 29670 25130 27997 33357 23892 28632 27881 28743 29273 36084 32847 40382 36980 34875 39138 42756 39972 51430 27428 23071 28550 32940 25268 29308 27942 29567 29928 36189 33780 40590 37738 36571 39830 43309 38316 48715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230590000 7886 4031;3790 7461 14958;14959 12027 12027 1 9606 Homo sapiens 0.030536699909134768 EVIAVSCGPAQCQETIR Unmodified 1916.9084 0.90843116 3563 P38117-2;P38117 ETFB Electron transfer flavoprotein subunit beta yes no 0 0 0 4.5 0.5 1 1 47.54 47.598 3 4.5248000000000004E-24 12856 20230619_1883_Aki_TMTPro18x_K_F4 213.49 201.97 103380 71146 82791 90920 79312 104530 104080 102660 122030 123090 117720 104700 145420 109540 107140 146220 130170 134570 95342 65344 85843 90368 83526 104580 104050 105530 123180 122760 122070 107390 145640 114850 111110 145570 124350 127920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 431050000 7887 3563 7462 14960;14961 12028;12029 12028 2 9606 Homo sapiens -0.013346717533750052 EVICTSR Unmodified 863.4171 0.41710179 3187 M0QXB0;V9GZ56;Q9Y4Z0;U3KQK1 LSM4 U6 snRNA-associated Sm-like protein LSm4 yes no 0 0 0 3.5 0.5 1 1 34.686 34.742 2 0.020601 7441 20230619_1883_Aki_TMTPro18x_K_F4 104.37 25.75 60890 34503 71907 76241 90137 108570 75119 78511 94061 59950 89682 99608 92827 84054 85162 46130 115250 114730 56280 31960 72435 73875 91855 106530 77219 81798 94446 62880 92421 98703 94336 85275 88162 50936 109980 108250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145000000 7888 3187 7463 14962;14963 12030 12030 1 9606 Homo sapiens -0.020070074224463497 EVIELPLTNPELFQR Unmodified 1796.9672 0.96724989 896 V9HW24;A0A087X2I1;P62333;H0YJC0;H0YJS8;B4DR91 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 6 0 1 63.524 63.572 2 2.5099E-76 19727 20230619_1886_Aki_TMTPro18x_K_F6 345.64 300.49 61907 47050 53016 59584 53946 75845 63718 67346 74270 80834 71646 68477 84127 64531 74336 80055 75137 83233 57150 43191 54673 59342 56387 75217 64013 69712 75027 80593 74158 69945 84947 67575 75840 80358 71939 78991 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94089000 7889 896 7464 14964 12031 12031 1 9606 Homo sapiens 0.10064495874894419 EVIELPVK Unmodified 925.54843 0.54843354 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8;Q59GS3;J3QSA9;J3KRP2;J3QQM1;J3QRR3;J3QLH6;J3QRW1;A0A994J6H0;J3QSE0 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 5 0.816 1 1 1 55.933 55.982 2 0.0034787 16243 20230619_1885_Aki_TMTPro18x_K_F5 119.27 63.264 143900 124450 126880 160790 157570 168270 156240 157300 194690 183350 177660 172070 192640 151990 156650 193620 182790 187630 132980 114210 130970 159430 161260 169350 158780 162160 195540 183600 183660 174540 194370 159710 161580 193450 174670 178250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 312280000 7890 1202 7465 14965;14966;14967 12032 12032 1 9606 Homo sapiens 0.08268126217092231 EVIIMATNCENCGHR Unmodified 1802.7862 0.78620754 2605 H7C0E5;B4DVT8;H7BZM7;O75312 ZPR1 Zinc finger protein ZPR1 yes no 0 0 0 4.33 0.471 2 1 44.368 44.43 3 3.069E-19 11411 20230619_1885_Aki_TMTPro18x_K_F5 212.55 200.64 99709 73188 93264 98116 90340 106200 107780 90905 106630 106380 122140 97453 102370 78987 123910 96464 89328 84324 92090 67236 95276 97120 94575 106400 107620 94400 109270 106420 123610 98775 106010 83037 123560 96082 85768 80238 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112890000 7891 2605 7466 14968;14969;14970 12033;12034;12035 12034 3 9606 Homo sapiens -0.08307412036606365 EVIPFLK Unmodified 844.50584 0.50584045 1588 Q15154;Q15154-5;H0YBA1;D3DSQ0;A0A5H1ZRS1;B9EIS5;A2RUU9;Q15154-2;Q15154-4;A0A4W8VX11;A0A088AWL4;B4DJ00;B4DWY1 PCM1 Pericentriolar material 1 protein yes no 0 0 0 1 0 1 61.274 61.274 3 0.039354 18980 20230619_1880_Aki_TMTPro18x_K_F1 69.344 12.241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7892 1588 7467 14971 12036 12036 1 9606 Homo sapiens 0.07736775879504876 EVIPISDPELK Unmodified 1238.6758 0.6758189 4110 Q6IN85;H0YIY8;G3V5Z3;A0A024R6M2;Q6IN85-5;Q6IN85-2;H0YJN6 SMEK1;KIAA2010 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes no 0 0 0 3 0 1 57.155 57.187 3 8.6709E-05 17270 20230619_1882_Aki_TMTPro18x_K_F3 120.96 103.63 32480 28774 33121 33834 31763 30032 30360 34771 38326 28785 35693 37067 35106 27721 41088 43465 32964 33072 30054 26380 33564 33719 33033 30785 30965 35036 38453 29666 36743 36972 36110 29718 41243 42839 31619 31521 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15032000 7893 4110 7468 14972 12037 12037 1 9606 Homo sapiens 0.06602802300608346 EVIPVNVPEAQEEMK Oxidation (M) 1726.8448 0.8447515 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 1 0 3 0.816 1 1 1 53.177 53.214 3 7.095E-05 15602 20230619_1882_Aki_TMTPro18x_K_F3 95.538 75.111 56916 50058 56186 59053 56230 63952 63970 63750 71799 69052 70571 74175 71361 64644 73476 80055 68678 83394 52647 45895 57160 58975 58629 64296 64301 65285 72654 69659 72540 74750 72927 67798 74458 80368 65859 79119 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 704110000 7894 3402 7469 14973;14974;14975 12038 12038 2016 1 9606 Homo sapiens 0.010402910811535548 EVISHIGK Unmodified 881.49707 0.49706667 2852 Q9P2W9;D6RF48 STX18 Syntaxin-18 yes no 0 0 0 7 0 1 41.287 41.358 3 0.0022981 9820 20230619_1887_Aki_TMTPro18x_K_F7 105.57 63.588 45661 34879 43079 45622 51049 55404 59856 52962 77015 52929 61342 66002 65408 55683 60327 65353 75005 70041 42184 32029 44122 45314 52651 55221 60322 54294 76771 53946 63883 66066 66411 58287 62267 65769 71588 66493 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14203000 7895 2852 7470 14976 12039 12039 1 9606 Homo sapiens 0.05157802243047627 EVLDQVCYR Unmodified 1180.5547 0.55465791 146 A0A024R1K8;Q15459;Q15459-2;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 3.5 0.5 1 1 47.083 47.143 2 1.0119E-05 12653 20230619_1883_Aki_TMTPro18x_K_F4 193.41 171.9 359870 275330 326370 362690 336190 414630 392090 376080 509900 445700 386670 404580 479190 392580 340050 515710 493580 488040 332370 252850 334770 359680 350530 414300 395580 388740 507940 445720 406520 412230 479650 411960 357670 514160 470730 463850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 341630000 7896 146 7471 14977;14978 12040;12041 12041 2 9606 Homo sapiens -0.028397236137152504 EVLDSFLDLAR Unmodified 1276.6663 0.66631685 3940 Q71UA6;Q59ES3;Q15758 SLC1A5 Amino acid transporter;Neutral amino acid transporter B(0) yes no 0 0 0 5.5 0.5 1 1 64.493 64.538 2 2.5401E-17 20154 20230619_1886_Aki_TMTPro18x_K_F6 198.72 165.82 97083 81561 90930 102370 61563 77795 94533 93261 110980 137590 113430 124700 142980 102350 112600 173440 120640 136840 89738 74835 92523 101360 67260 80881 93944 95420 112390 136210 117610 126440 143410 110120 115830 170900 115460 130300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70095000 7897 3940 7472 14979;14980 12042;12043 12043 2 9606 Homo sapiens 0.039050340151106866 EVLEALGEVMVSR Unmodified 1430.7439 0.74391524 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7;A0A0G2JIC2;B4DNU2 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 6 0 1 64.15 64.196 3 8.8786E-05 19998 20230619_1886_Aki_TMTPro18x_K_F6 103.76 92.54 37981 29188 34636 37607 27636 38496 38552 35230 40909 42342 38834 38447 51364 40506 40382 48262 47321 49213 35081 26798 35388 37294 29621 38764 38311 36421 41484 42303 40485 39288 51487 42150 41681 48404 45222 46726 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35909000 7898 1296 7473 14981 12044 12044 1 9606 Homo sapiens 0.0457730388895925 EVLEDFAEDGEK Unmodified 1379.6093 0.60925548 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YFD1;Q6PEK6;H7C141;H7C3G2 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 1.5 0.5 1 1 57.177 57.194 2;3 1.3099E-11 17375 20230619_1880_Aki_TMTPro18x_K_F1 180.88 161.12 18348 15071 16564 17460 16857 17687 16142 20455 23379 17646 18686 19784 23793 16641 18332 20816 20533 25569 16953 13819 16980 17448 17479 17936 16553 20619 23210 18054 19617 19886 23840 17515 18874 21107 19660 24217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6262500 7899 2865 7474 14982;14983 12045;12046 12045 2 9606 Homo sapiens -0.06536478051930317 EVLEGLDYLHR Unmodified 1342.6881 0.68811492 1812 X5D7P8;A0A8V8TKT5;Q6E0B2;X5DP03;X5D2U3;Q9UEW8-2;Q9UEW8 STK39 STE20/SPS1-related proline-alanine-rich protein kinase yes no 0 0 0 4 0 1 54.769 54.78 3 1.031E-44 16128 20230619_1883_Aki_TMTPro18x_K_F4 230.95 198.43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7900 1812 7475 14984 12047 12047 1 9606 Homo sapiens 0.030478387636549087 EVLEYNAIGGK Unmodified 1191.6136 0.61355299 3449 P14324-2;P14324;A0A087WVN4;Q14329;B3KMW3;A0A087X1D8 FDPS Farnesyl pyrophosphate synthase yes no 0 0 0 5 0.816 1 1 1 52.839 52.897 3 2.1192E-06 14995 20230619_1885_Aki_TMTPro18x_K_F5 136.96 108 347330 301980 311320 331160 291360 341500 331240 324600 398280 404260 405290 376700 426100 342590 349190 475100 415380 407780 321020 276690 319080 332290 305630 344240 333820 334940 402340 403490 416120 382750 430480 361540 360790 471160 396740 388050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 880140000 7901 3449 7476 14985;14986;14987 12048;12049 12048 2 9606 Homo sapiens 0.025410759522856097 EVLFQHSGFQQS Unmodified 1405.6626 0.66262845 3073 H3BU63;H3BSE3;H3BQB0;H3BRQ0;Q96CD2-2;Q96CD2 PPCDC Phosphopantothenoylcysteine decarboxylase yes no 0 0 0 6 0 1 50.763 50.84 2 0.0028846 14243 20230619_1886_Aki_TMTPro18x_K_F6 96.229 74.929 12840 12255 15163 16143 12551 13234 16698 14680 15730 16616 15147 14560 17546 14737 17864 15750 15824 14325 11902 11245 15178 15946 13336 13638 16566 14960 16066 16625 15677 14879 17842 15250 18034 15742 15150 13626 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13831000 7902 3073 7477 14988 12050 12050 1 9606 Homo sapiens -0.02397635758757133 EVLHELYK Unmodified 1029.5495 0.54949617 575 A0A024R9I0;P21283;E7EV59;B7Z593 ATP6V1C1 V-type proton ATPase subunit C 1 yes no 0 0 0 5 0 1 47.752 47.829 3 0.00067391 12836 20230619_1885_Aki_TMTPro18x_K_F5 117.89 57.453 57978 41815 51237 67109 55184 68731 58868 62112 84588 70801 72956 79811 89556 71641 72424 94524 85056 85439 53520 38500 52773 65651 57234 69173 59932 64155 84233 71405 76153 80358 90047 75378 74766 94047 81261 81246 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44900000 7903 575 7478 14989 12051 12051 1 9606 Homo sapiens 0.035903405860153725 EVLHGNQR Unmodified 951.48863 0.48862725 3732 P62906 RPL10A 60S ribosomal protein L10a yes yes 0 0 0 3.25 1.48 1 1 1 1 24.605 24.677 3 4.0626E-05 3800 20230619_1883_Aki_TMTPro18x_K_F4 174.27 141.8 455960 223610 601500 611440 814350 807150 618540 759590 690820 510730 733570 872770 516930 554800 724500 278510 780640 746270 421670 208180 602000 587400 822710 799570 637830 772310 700590 540420 742460 857600 545120 568080 733620 312030 746130 703980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1105500000 7904 3732 7479 14990;14991;14992;14993 12052;12053;12054 12053 3 9606 Homo sapiens 0.010942483264216207 EVLHSYLR Unmodified 1015.5451 0.5450795 1879 A0A994J5K1;Q5SXN9;Q10713;Q10713-2 PMPCA Mitochondrial-processing peptidase subunit alpha yes no 0 0 0 8 0 1 41.262 41.26 3 0.00016276 9992 20230619_1888_Aki_TMTPro18x_K_F8 160.88 75.668 87197 71673 73796 74779 96838 114360 93277 94219 146560 36268 28180 29952 33102 28383 56778 35903 37114 29962 80529 65655 76444 75805 98867 112160 95784 96069 141230 39813 34756 30688 34803 29724 56115 35698 35651 28548 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52219000 7905 1879 7480 14994 12055 12055 1 9606 Homo sapiens 0.037928761630723784 EVLLPEVGAK Unmodified 1053.607 0.60701105 1401 Q13724;A0A384MDR6;Q58F09;Q13724-2;A0A8I5KTK5;A0A3B3IRK6;A0A3B3IS52;A0A8I5KQG9;A0A3B3ITC1;C9JDQ1 MOGS;GCS1 Mannosyl-oligosaccharide glucosidase yes no 0 0 0 5 0 1 55.812 55.876 3 0.0095072 16213 20230619_1885_Aki_TMTPro18x_K_F5 68.893 32.368 22398 20793 26047 30126 25234 30365 29464 27784 36025 30407 27838 31730 33596 28270 29403 33240 31155 33325 20756 19102 26174 29643 26406 30613 29658 28646 35999 30646 29226 32022 33909 29540 30090 33319 29807 31643 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26284000 7906 1401 7481 14995 12056 12056 1 9606 Homo sapiens 0.08235182791554507 EVLLTGIQTQGAK Unmodified 1356.7613 0.76127986 2794 CON__Q28107 yes yes 0 0 0 1 0 1 54.666 54.666 3 3.1281E-05 16279 20230619_1880_Aki_TMTPro18x_K_F1 120.55 0 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7907 2794 7482 14996 12057 12057 1 9606 Homo sapiens 0.09716967486269823 EVLMCGNNNCCR Oxidation (M) 1541.5843 0.5843366 4759 Q9Y6K1;Q59HC6;A0A0C4DG02;F8WE91;Q9Y6K1-2 DNMT3A DNA (cytosine-5)-methyltransferase 3A yes no 0 1 0 5 0 1 35.637 35.727 3 0.01611 7835 20230619_1885_Aki_TMTPro18x_K_F5 58.511 55.474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7908 4759 7483 14997 12058 12058 2902 1 9606 Homo sapiens -0.16479218993822542 EVLMDCAHLVK Oxidation (M) 1329.6421 0.64209271 4176 Q7Z5U5;Q86WR0;G3V121;B7Z2L8 CCDC25 Coiled-coil domain-containing protein 25 yes no 0 1 0 5.5 0.5 1 1 46.537 46.617 3 0.032713 12418 20230619_1886_Aki_TMTPro18x_K_F6 47.361 31.108 57067 49357 61419 60893 63052 72551 66965 62619 78725 63875 74718 75093 75359 66563 69463 81245 82775 83425 52820 45274 62056 60702 65491 72245 67656 64711 79319 64871 76879 75470 76645 69703 71539 81495 79075 79212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48149000 7909 4176 7484 14998;14999 12059 12059 2689 1 9606 Homo sapiens -0.009542657344809413 EVLMDCAHLVK Unmodified 1313.6472 0.64717808 4176 Q7Z5U5;Q86WR0;G3V121;B7Z2L8 CCDC25 Coiled-coil domain-containing protein 25 yes no 0 0 0 6 0 1 50.933 51.01 3 0.0003531 14335 20230619_1886_Aki_TMTPro18x_K_F6 98.105 61.258 127570 110520 124030 129880 115410 133280 135500 133680 163900 149290 137670 137110 161130 134070 144380 168680 158200 172640 117980 101330 126200 129650 121190 134530 136340 136960 164340 149720 143510 139680 162920 140270 148010 169100 151330 163880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55016000 7910 4176 7484 15000 12060 12060 1 9606 Homo sapiens 0.0029003812812788965 EVLPALENNK Unmodified 1125.603 0.60298831 2200 B1AQP2;Q9UHV9 PFDN2 Prefoldin subunit 2 yes no 0 0 0 4.8 0.748 2 2 1 51.762 51.818 2;3 5.6199E-06 14498 20230619_1885_Aki_TMTPro18x_K_F5 160.53 117.28 197160 168670 181230 199110 194840 210170 203170 189940 238670 256260 245420 232930 264560 215430 227870 276380 263660 241930 182240 154650 185730 198730 201570 211290 205470 197250 241580 254740 252210 236980 267620 226050 234590 274710 251780 230230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 734710000 7911 2200 7485 15001;15002;15003;15004;15005 12061;12062 12062 2 9606 Homo sapiens 0.0452109329785344 EVLPGEIVEISR Unmodified 1339.7347 0.73473076 2042 Q53H22;A8K4H7;Q06203 PPAT Amidophosphoribosyltransferase yes no 0 0 0 3.5 0.5 1 1 57.034 57.053 2 6.0271E-13 17238 20230619_1882_Aki_TMTPro18x_K_F3 209.96 158.89 106260 83907 97766 100780 80067 79927 84601 89421 96446 124180 132380 147550 138850 118810 141080 160750 146070 166820 98166 76972 99738 100160 84659 82679 85512 91664 99134 124270 134540 147750 141610 125710 143810 161140 139850 158310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144980000 7912 2042 7486 15006;15007 12063 12063 1 9606 Homo sapiens 0.07845278594959382 EVLPHVPLGVIQR Unmodified 1455.8562 0.8561833 2161 Q68CX8;A8KAQ6;B4E3W1;Q9Y679-3;Q9Y679 DKFZp686P12272;AUP1 Ancient ubiquitous protein 1 yes no 0 0 0 1.5 0.5 1 1 52.904 52.921 3 8.6749E-11 15538 20230619_1880_Aki_TMTPro18x_K_F1 132.56 116.68 51111 51359 54777 59163 50252 53624 52776 55331 58791 65314 61780 60116 64391 50859 64022 65704 58090 66210 47356 47057 55290 59051 52601 54709 53290 56681 59723 65293 63360 60951 65577 53581 64795 65812 55693 62851 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 291730000 7913 2161 7487 15008;15009 12064;12065 12064 2 9606 Homo sapiens 0.14648945748126607 EVLPLAFLGMHEIADEEK Unmodified 2040.0238 0.023778495 1731 A0A804HJA4;J3KN16;Q5VYK3;B3KXF2 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 5 0 1 63.69 63.736 3 0.035858 19617 20230619_1885_Aki_TMTPro18x_K_F5 54.253 37.947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7914 1731 7488 15010 12066 12066 1 9606 Homo sapiens 0.0453675564929199 EVLPSTR Unmodified 800.43922 0.43921744 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 4 0.816 1 1 1 37.219 37.282 2 0.036792 8472 20230619_1883_Aki_TMTPro18x_K_F4 92.187 39.024 293730 219810 298280 306110 344560 362680 324530 344100 456990 365720 387490 428260 418850 368550 359730 341150 490650 466860 271490 202000 303330 302730 353780 361990 332490 353330 455100 370560 402400 429580 423920 380820 373920 350390 468020 442180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 377520000 7915 1229 7489 15011;15012;15013 12067 12067 1 9606 Homo sapiens 0.031015403176070322 EVLQALEELAVNYDQK Unmodified 1860.9469 0.94690838 2727;1036 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;A0A6Q8PFV6;O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;A0A7I2V581;Q57Z91;O60282-2;A0A7I2V352;A0A7I2YQQ7;A0A7I2V3V4;Q3LIE3 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12;KIF5C;Nbla04137 Kinesin-1 heavy chain;Kinesin-like protein;Kinesin heavy chain isoform 5C no no 0 0 0 6 0.816 1 1 1 66.423 66.459 3 8.1049E-26 20742 20230619_1885_Aki_TMTPro18x_K_F5 228.76 200.92 52628 45989 56492 65692 44612 50770 56210 54828 56831 57650 66099 69540 71978 68780 66092 75425 68813 78257 48714 42251 56942 64505 47578 52551 56055 55857 58227 58473 67670 70051 73040 71286 67516 75825 65879 74265 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 99661000 7916 2727;1036 7490 15014;15015;15016 12068;12069;12070 12068 3 9606 Homo sapiens 0.050872804244136205 EVLQECK Unmodified 904.43242 0.43241751 3782 Q658N3;Q53F47;Q01658 DKFZp666G145;DR1 Protein Dr1 yes no 0 0 0 3 0 1 42.014 42.076 2 0.0049884 10518 20230619_1882_Aki_TMTPro18x_K_F3 144.38 85.394 55370 36458 69575 69658 92232 93898 79275 94325 99983 70454 100320 101400 88595 82208 80095 45586 114720 110150 51245 33664 69828 67890 93590 93066 81363 95639 100560 73456 102390 100810 90462 83553 83302 50130 109400 103950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32945000 7917 3782 7491 15017 12071 12071 1 9606 Homo sapiens -0.02362140625268694 EVLQNLGPK Unmodified 996.5604 0.56039521 1217 Q6DEN2;A0A140VK07;Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 7.5 0.5 1 1 50.141 50.22 2 8.495E-06 13596 20230619_1888_Aki_TMTPro18x_K_F8 176.75 150.06 233420 191510 210380 233040 220920 243290 206340 179960 233180 306460 254080 227560 313110 218250 218250 337110 266770 237850 215670 175680 215880 232010 228330 243860 209770 191700 237420 300520 262000 234390 312880 231860 226930 330950 254580 227070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 291450000 7918 1217 7492 15018;15019 12072;12073 12073 2 9606 Homo sapiens 0.061977429602734446 EVLQNQLGIRPPTR Unmodified 1619.9107 0.91073807 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 1 3.5 0.5 1 1 46.764 46.806 3 8.143E-09 12700 20230619_1882_Aki_TMTPro18x_K_F3 148.57 86.163 61882 54142 66346 64556 61438 65715 59948 69194 76473 74761 82553 87966 85034 66109 76089 86626 95626 86310 57280 49645 66927 64382 64164 66459 61105 70580 77219 75638 84548 87957 86258 70015 78661 86673 91241 82015 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76921000 7919 594 7493 15020;15021 12074;12075 12074 2 9606 Homo sapiens 0.12557912828856388 EVLSMDDEIQK Unmodified 1305.6122 0.61223236 3806 Q06210-2;Q06210;A0A6I8PRN4;A0A6I8PTT9 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 0 2.5 0.5 1 1 53.906 53.946 3 0.00010564 16168 20230619_1881_Aki_TMTPro18x_K_F2 119.34 81.992 58299 46007 58471 61069 47091 55394 63238 54871 71044 68895 61895 70053 80010 62545 61792 90988 84643 89979 53897 42248 59235 60359 50274 56426 63056 56512 71596 68923 64774 70820 80214 66296 64578 90820 80802 85453 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 340860000 7920 3806 7494 15022;15023 12076 12076 1 9606 Homo sapiens -0.0283492619878416 EVLTEDK Unmodified 832.41781 0.4178133 134 A0A024R1A3;P22314-2;P22314 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 1.5 0.5 1 1 43.075 43.115 2 0.003113 11273 20230619_1881_Aki_TMTPro18x_K_F2 157.21 68.566 308530 199770 354870 389310 463380 542560 367840 479270 555520 372120 547030 768460 532860 560710 447430 312260 704610 705220 285280 184530 358470 379170 470670 535050 382530 490930 554210 394110 562350 753860 541210 571890 469850 340330 671680 665650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 177050000 7921 134 7495 15024;15025 12077;12078 12078 2 9606 Homo sapiens -0.005098895017567884 EVMLVGIGDK Unmodified 1059.5634 0.56343168 2521;3555 P36542-2;B4DL14;B4DFE6;Q8TAS0;P36542 ATP5C1 ATP synthase subunit gamma, mitochondrial;ATP synthase subunit gamma no no 0 0 0 6 0.816 2 2 2 57.627 57.687 2;3 8.5027E-05 16956 20230619_1885_Aki_TMTPro18x_K_F5 159.4 117.42 143040 124020 131990 152340 125580 146600 162540 157930 182620 170440 172360 185710 181100 154950 171030 191290 184560 193370 132230 113760 135050 151450 132030 148930 162350 160930 184470 172040 177810 186770 184100 162760 174960 191710 176520 183610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1107200000 7922 2521;3555 7496 15026;15027;15028;15029;15030;15031 12079;12080 12079 2 9606 Homo sapiens 0.03603250022774773 EVMSDLEESK Unmodified 1165.5173 0.51726935 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;Q01433-5;Q01433-3;Q01433-4;A0A7P0Z4H6;H0YF16;A0A804H2H4;A0A590UK85 AMPD2 AMP deaminase 2 yes no 0 0 0 1 0 1 50.793 50.793 3 0.00046153 14686 20230619_1880_Aki_TMTPro18x_K_F1 88.056 63.713 26172 21337 28442 29211 31884 29727 32337 32120 38119 36807 40512 35885 40045 34190 35857 39181 43737 35139 24218 19598 28755 28861 32813 30086 32762 32773 38600 36923 41397 36434 40692 35582 36985 39063 41711 33449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109390000 7923 1570 7497 15032 12081 12081 1 9606 Homo sapiens -0.058868596699767295 EVMVDDR Oxidation (M) 878.38038 0.38038194 1257 A0A158RFU6;P51149;A0A6Q8PG52;A0A6Q8PH84;C9J8S3;A0A6Q8PGE6;B4DPH9;C9J592;C9J4V0;C9IZZ0;C9J7D1;A0A6Q8PF79 RAB7A Ras-related protein Rab-7a yes no 0 1 0 1 0 1 33.42 33.42 2 0.031198 7323 20230619_1880_Aki_TMTPro18x_K_F1 90.308 43.241 99080 55399 92712 103100 128410 124800 105270 121360 160830 103870 139930 145130 115440 119450 134410 80607 163630 149710 91387 51175 95278 100390 129920 124420 109210 123710 159630 107280 143530 144490 119680 121990 137640 85684 156180 141520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129950000 7924 1257 7498 15033 12082 12082 799 1 9606 Homo sapiens -0.06367304039008559 EVNEQTHFASMPR Oxidation (M) 1560.6991 0.69909031 1781 Q6NUN2;A3F769;A3F768;A0A8I5KX72;O15226;O15226-2;A2I828;A1Z1A7;A2I830 NKRF;NRF NF-kappa-B-repressing factor yes no 0 1 0 3 0 1 34.117 34.183 3 0.0012933 7247 20230619_1882_Aki_TMTPro18x_K_F3 76.358 64.44 20043 17474 22839 17671 25685 26452 21692 21961 29250 21424 20453 19274 21001 16424 22038 26168 24953 22105 18563 15999 22974 17963 26338 25992 22340 22720 29009 21635 21419 19587 21466 17554 22575 25898 23827 21049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11857000 7925 1781 7499 15034 12083 12083 1151 1 9606 Homo sapiens -0.05883126924368298 EVNEVIQNPATITR Unmodified 1582.8315 0.83148469 4741 Q9Y4X5;H3BNB9;H3BSK4 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes no 0 0 0 5 0 1 49.775 49.851 2 3.7532E-06 13704 20230619_1885_Aki_TMTPro18x_K_F5 141.32 110.74 20372 17698 21650 21905 17460 21404 24389 24187 24812 29556 25801 28362 27896 25200 20853 29509 30817 31529 18854 16235 21830 21777 18661 21742 24209 24660 25320 29532 26528 28723 28090 26326 21927 29671 29394 29923 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11443000 7926 4741 7500 15035 12084 12084 1 9606 Homo sapiens 0.06338221084070028 EVNFTSELRK Unmodified 1221.6354 0.63535107 4088 Q643R0;Q9ULW0;Q9ULW0-2;B3KM90 HCTP4;TPX2 Targeting protein for Xklp2 yes no 0 0 1 7 0 1 47.446 47.534 3 0.081861 12443 20230619_1887_Aki_TMTPro18x_K_F7 38.96 24.178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7927 4088 7501 15036 12085 12085 1 9606 Homo sapiens 0.03339880700832509 EVNLAVQNAK Unmodified 1084.5877 0.58767259 2459 B4DE91;P49189;B4DX14;P49189-3 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 6.5 0.5 1 1 46.116 46.202 2 4.9062E-07 12218 20230619_1886_Aki_TMTPro18x_K_F6 218.58 148.95 108760 85979 96735 105150 125670 142110 134580 123470 159510 129780 162180 165520 154740 136290 137310 157370 180990 177000 100460 78887 99778 105090 128570 140460 135890 127610 161050 131980 165950 165450 157410 142650 142450 158840 172720 167920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123700000 7928 2459 7502 15037;15038 12086;12087 12086 2 9606 Homo sapiens 0.04876226500641678 EVNTASLCR Unmodified 1048.4971 0.49714303 4361 Q96HR3-2;Q96HR3 MED30 Mediator of RNA polymerase II transcription subunit 30 yes no 0 0 0 4.5 0.5 1 1 38.018 38.086 2 0.014207 8684 20230619_1885_Aki_TMTPro18x_K_F5 77.533 34.533 57593 42797 55452 55638 66570 80922 67376 62369 80839 61715 70838 69936 66110 58796 64994 64987 79209 74751 53208 39301 56690 55446 68370 79453 68280 64983 81125 62713 72941 70253 67607 61344 66891 65757 75618 70912 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49741000 7929 4361 7503 15039;15040 12088 12088 1 9606 Homo sapiens -0.0251656581926909 EVPAVPETLK Unmodified 1081.6019 0.60192568 3473 P18124;A0A024R814 RPL7 60S ribosomal protein L7 yes no 0 0 0 4.5 1.12 1 1 1 1 51.851 51.912 3 0.00030316 14854 20230619_1883_Aki_TMTPro18x_K_F4 98.943 63.432 460790 352830 382240 438740 401790 470120 470720 462880 545100 506050 496370 492990 565340 504810 467220 616290 562810 580430 425310 323820 395520 436400 418120 472780 472850 474550 549190 508900 514510 501720 570420 526110 482930 615080 537690 551610 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1993099999.9999998 7930 3473 7504 15041;15042;15043;15044 12089;12090;12091 12089 3 9606 Homo sapiens 0.06438878928929626 EVPAVPETLKK Unmodified 1209.6969 0.69688869 3473 P18124;A0A024R814 RPL7 60S ribosomal protein L7 yes no 0 0 1 7 0.816 1 1 1 48.699 48.777 3 0.033836 13061 20230619_1887_Aki_TMTPro18x_K_F7 54.471 23.04 166880 167710 159540 212340 168770 195460 176250 158190 211770 256630 252600 195170 178700 129560 163090 218650 204930 197690 154480 153800 163140 210430 174910 198100 178390 166920 215510 252140 253540 198780 183840 140650 168750 216920 195620 188020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 996350000 7931 3473 7505 15045;15046;15047 12092 12092 1 9606 Homo sapiens 0.10042812400115508 EVPCYVFDEELRK Unmodified 1682.7974 0.79740737 3435 Q59EZ3;P11717;A0A7I2V381;A0A7I2YQS7 IGF2R Cation-independent mannose-6-phosphate receptor yes no 0 0 1 5 0 1 55.172 55.239 3 0.027137 15956 20230619_1885_Aki_TMTPro18x_K_F5 55.98 43.956 66195 46578 54027 74896 56390 70243 58878 58896 74819 79517 77693 77334 91001 74895 59094 86570 87282 94256 61062 42891 56059 73166 58576 71074 59725 61535 75488 79209 80111 78523 90942 77988 62360 87152 83287 89418 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38365000 7932 3435 7506 15048 12093 12093 1 9606 Homo sapiens -0.016679433991839687 EVPEHITEEELK Unmodified 1451.7144 0.71438925 4150 Q7L0Y3;C9JVB6 TRMT10C Mitochondrial ribonuclease P protein 1 yes no 0 0 0 2 0.816 1 1 1 46.306 46.358 3 2.8327E-07 12740 20230619_1881_Aki_TMTPro18x_K_F2 159.5 130.2 206050 187110 207150 220940 246190 267360 243720 239850 268440 220640 224670 225950 241480 191250 230910 239590 246330 231070 190670 171530 211010 220960 252530 266230 246620 246420 270270 224270 233360 228020 245350 201040 235880 239510 235430 219620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 287930000 7933 4150 7507 15049;15050;15051 12094 12094 1 9606 Homo sapiens 0.006600631444598548 EVPGADRYQEAEPGPLGSAVGSQR Unmodified 2469.1884 0.18842907 2756 C9JJX6;E9PDC3;O00192-2;O00192;B9EH95;Q8NAH4 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome yes no 0 0 1 4 0 1 46.677 46.719 3 2.0466E-26 12480 20230619_1883_Aki_TMTPro18x_K_F4 185.71 165.35 32174 27022 29789 35358 39239 46529 44252 49003 50083 44889 43332 47116 49509 42761 43133 51728 50466 55517 29737 24805 30648 35162 40177 46238 44499 49748 50424 45656 45073 47586 50046 44732 44426 52023 48249 52672 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62414000 7934 2756 7508 15052 12095 12095 1 9606 Homo sapiens 0.012602393227552966 EVPGLVHQPR Unmodified 1130.6196 0.61964142 554 A0A3B3ITU3;A0A024R926;Q9H246 C1orf21 Uncharacterized protein C1orf21 yes no 0 0 0 6.5 0.5 1 1 37.931 38.001 3 6.109E-05 8701 20230619_1886_Aki_TMTPro18x_K_F6 137.05 77.84 83397 59429 89024 87665 91269 104790 117850 114470 158180 125620 126690 138670 158650 121900 94836 165190 152150 146920 77096 54662 90023 86435 95407 104840 118470 116550 157520 126820 132850 139650 157860 128610 101110 164060 144980 139750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100780000 7935 554 7509 15053;15054 12096;12097 12096 2 9606 Homo sapiens 0.05955638974455724 EVPGPDCR Unmodified 928.40727 0.40726539 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 0 2 0.816 1 1 1 34.419 34.459 2 0.0022182 7352 20230619_1881_Aki_TMTPro18x_K_F2 130.22 115.7 103010 60456 108940 106670 139310 145430 122120 133690 145560 119260 159950 170470 162890 150220 156720 83445 186930 173360 95127 55789 110600 104370 141780 143780 124910 136960 147430 122910 163640 169880 165940 152150 160710 90227 178470 163750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1091900000 7936 1426 7510 15055;15056;15057 12098;12099;12100 12099 3 9606 Homo sapiens -0.059801954278327685 EVPMVVVPPVGAK Unmodified 1320.7475 0.74754405 1989 Q9P2E9;A7BI36;A2A2S5;Q32NB1 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 1 0 1 59.767 59.767 3 0.016487 18401 20230619_1880_Aki_TMTPro18x_K_F1 61.375 41.046 29644 27418 28284 33316 27512 33832 35891 36705 36967 37089 33998 36513 33157 30048 35792 38073 36981 37090 27423 25140 28873 33169 28886 34230 35735 37308 37489 37434 35015 36865 34009 31624 36428 38071 35372 35238 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16948000 7937 1989 7511 15058 12101 12101 1 9606 Homo sapiens 0.10000018453479242 EVPSKEEPSPVK Unmodified 1324.6874 0.68744622 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 1 4.5 0.5 1 1 41.782 41.846 3 2.5495E-05 10284 20230619_1885_Aki_TMTPro18x_K_F5 125.54 93.945 577940 450870 547740 619010 640950 578290 605660 592140 656080 696170 870020 744610 655900 529870 812970 507770 716690 446630 534020 414210 560550 610640 656470 588480 614540 606970 673890 699180 872610 746300 683170 552430 816810 508420 684780 425850 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 502290000 7938 630 7512 15059;15060 12102;12103;12104 12103 3 9606 Homo sapiens 0.038089993239282194 EVPVYIGEDSTIAR Unmodified 1547.7831 0.78313752 797 A0A075B7B1;O15061-2;O15061;H0YL34 SYNM Synemin yes no 0 0 0 3 0 1 53.708 53.761 2 2.9185E-08 15829 20230619_1882_Aki_TMTPro18x_K_F3 191.53 144.45 14050 12750 15586 17939 26217 33386 20828 20197 27222 20428 27659 30629 22096 24285 28501 27720 28957 32335 13012 11710 15886 17868 26288 32264 21503 21548 27358 20969 28145 30417 23072 25414 28892 28062 27725 30651 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13467000 7939 797 7513 15061 12105 12105 1 9606 Homo sapiens 0.03115727444173899 EVQDGIAPR Unmodified 983.50361 0.50360861 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 2 0 1 37.105 37.166 2 0.00039187 8560 20230619_1881_Aki_TMTPro18x_K_F2 155.42 112.82 190310 144320 175950 194630 236010 238620 241360 229140 304060 237390 283410 276040 262140 234950 240040 220670 304020 278870 175780 132570 180950 192940 240480 237750 244870 234980 305110 240800 290730 277030 267310 242970 247870 225340 290090 264340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 241140000 7940 1213 7514 15062 12106 12106 1 9606 Homo sapiens 0.01119695403770038 EVQEFYK Unmodified 941.44945 0.44944778 810 B4DPP0;A6NNI4;A0A2R8Y478;A0A7I2V3T7;G8JLH6;A0A087WU13;F5GXT1;P21926;A0A7I2V3T0;Q56CY1;B4DK09 CD9;BTCC-1 Tetraspanin;CD9 antigen yes no 0 0 0 4.5 0.5 1 1 48.393 48.451 2 0.0018815 13232 20230619_1883_Aki_TMTPro18x_K_F4 165.52 104.56 167290 114960 119290 396860 435510 667180 202220 200770 402570 360300 386960 527910 476120 446540 323070 566090 591180 597090 154170 107450 131770 379440 423200 642360 223350 241820 398470 361390 402320 525280 476470 469330 347350 567910 563090 566770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 384350000 7941 810 7515 15063;15064 12107;12108 12107 2 9606 Homo sapiens -0.023618967478114428 EVQLAQIFEPLSR Unmodified 1528.8249 0.82494275 3001 G1UI16;Q29RF7;H0Y9L6 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 0 7.67 0.471 1 2 63.31 63.335 2;3 1.8342E-05 19253 20230619_1888_Aki_TMTPro18x_K_F8 152.38 100.65 90173 73318 82828 83302 74336 97188 87094 89941 100470 95984 95620 94468 104850 92511 99924 113880 100590 121800 83321 67216 84642 83515 78380 97034 87520 92530 101410 96659 98744 95948 106510 96631 101820 114490 96386 115520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 354240000 7942 3001 7516 15065;15066;15067 12109;12110 12110 2 9606 Homo sapiens 0.08168327923385732 EVQLEELEAAR Unmodified 1285.6514 0.65139506 3624 V9HWE7;P51570;Q6ZP37;K7EII7 HEL-S-19;GALK1 Galactokinase yes no 0 0 0 1.5 0.5 1 1 51.814 51.833 2 4.0818E-06 15082 20230619_1880_Aki_TMTPro18x_K_F1 160.81 128.5 104630 80240 95979 110750 115330 143310 110320 108880 119590 139120 149230 151680 146540 131920 146870 149070 162540 177070 96642 73725 98615 109690 118280 141590 111840 114420 122590 139360 151640 152720 149710 137650 150220 151080 155460 167830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134590000 7943 3624 7517 15068;15069 12111 12111 1 9606 Homo sapiens 0.01999542147086686 EVQMGDFVR Oxidation (M) 1095.5019 0.50189405 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;Q6ZME7;K7ELI6;K7EM43 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10;Peptidyl-prolyl cis-trans isomerase yes no 0 1 0 3 0 1 40.464 40.52 2 0.0082611 9806 20230619_1882_Aki_TMTPro18x_K_F3 83.623 69.466 119860 96434 105820 93498 134590 140410 129960 131480 154670 135750 155260 173060 145730 127470 163960 165580 165270 176320 110710 88292 109020 95378 137400 138280 132070 135000 156140 138110 159020 172430 149940 134970 166490 166370 158200 167310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113780000 7944 167 7518 15070 12112 12112 104 1 9606 Homo sapiens -0.042036816764948526 EVQMGDFVR Unmodified 1079.507 0.50697943 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;Q6ZME7;K7ELI6;K7EM43 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 4.5 0.5 1 1 49.783 49.838 2 3.4666E-06 13883 20230619_1883_Aki_TMTPro18x_K_F4 187.22 145.99 276730 234880 242820 210030 239490 331370 279090 284850 317470 332060 312970 392070 358530 315120 339190 356700 388170 422620 255680 214870 249330 216000 250740 324790 280340 295330 321270 334860 323910 392340 363680 329810 348050 361430 371160 400580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 458930000 7945 167 7518 15071;15072 12113 12113 1 9606 Homo sapiens -0.029593778138632842 EVQMNFLNQLTSVFNPR Unmodified 2036.0149 0.014945143 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 5.5 0.5 1 1 65.952 65.995 3 0.0054789 20766 20230619_1886_Aki_TMTPro18x_K_F6 49.036 29.713 9530.9 7319.5 8297.4 9708.6 8087.4 10263 10732 8294.9 10689 10538 12968 10957 10023 10671 11483 9315.4 11257 14523 8800.1 6722.1 8540 9610.8 8498.7 10287 10662 8680.1 10974 10548 13059 11097 10404 10946 11628 9681.1 10796 13727 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22926000 7946 4061 7519 15073;15074 12114 12114 1 9606 Homo sapiens 0.03837826803419375 EVQNQLVDR Unmodified 1099.5622 0.56218613 4268 Q8TCG1;Q8TCG1-2 KIAA1524 Protein CIP2A yes no 0 0 0 3 0 1 38.732 38.785 2 0.0019177 9080 20230619_1882_Aki_TMTPro18x_K_F3 111.31 31.272 40894 29037 32671 38207 40749 51838 44958 53883 66213 45864 50113 51909 53195 47681 37668 53174 58290 52002 37719 26674 34041 38004 41915 51396 45734 54646 65539 47003 52291 52293 53502 49596 39797 53240 55529 49428 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24916000 7947 4268 7520 15075 12115 12115 1 9606 Homo sapiens 0.01638751978248365 EVQQFHPAVR Unmodified 1209.6255 0.62545508 2703 B7Z8Z8;O60318 MCM3AP Germinal-center associated nuclear protein yes no 0 0 0 6 0 1 36.288 36.348 3 2.6996E-07 8096 20230619_1886_Aki_TMTPro18x_K_F6 159.11 124.55 35772 27306 33647 33259 45381 43715 42101 39193 50473 37709 45255 40150 42824 34277 42457 37358 46613 38931 33047 25057 34525 33240 46086 43324 42883 40313 50694 38294 46539 40468 43755 35726 43376 37602 44505 36989 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36256000 7948 2703 7521 15076 12116 12116 1 9606 Homo sapiens 0.029027374861243516 EVQQGEEFERR Unmodified 1405.6586 0.65860571 3375 Q6FGX9;Q53EY8;Q5T9B7;P00568;H0YID2 AK1 Adenylate kinase isoenzyme 1 yes no 0 0 1 1.5 0.5 1 1 33.984 34.012 3 1.4888E-12 7561 20230619_1880_Aki_TMTPro18x_K_F1 207.47 156.45 127760 100880 109880 119630 133630 139160 163840 171520 211500 173680 213250 207370 193880 166760 195760 218870 234980 203040 117970 92528 113550 119590 137770 139990 164860 172980 212610 176460 217830 207740 198640 176040 201310 218160 224230 193130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 435280000 7949 3375 7522 15077;15078 12117;12118 12117 2 9606 Homo sapiens -0.027997252524755822 EVQTAVR Unmodified 801.43447 0.43446642 4226 Q8N257;L0R4T3;A0A2R8Y619 HIST3H2BB;ABCF2 Histone H2B type 3-B;Histone H2B yes no 0 0 0 3 0.816 1 1 1 31.85 31.917 2 0.00088972 6329 20230619_1882_Aki_TMTPro18x_K_F3 176.65 87.282 396990 201450 567010 549890 705640 712360 512200 706110 496690 286710 532060 605650 364000 434420 563680 142550 631370 536130 367510 187500 563630 528220 715710 707160 528060 710130 507340 321900 537780 594050 387220 438120 570970 171430 602780 505400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 360850000 7950 4226 7523 15079;15080;15081 12119;12120;12121 12120 3 9606 Homo sapiens 0.025806561748595414 EVQTNDLK Unmodified 945.47673 0.47672516 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;B7Z3M5;D6RB09;E9PFI5;H0Y9Y4;D6R9B6 RPS3A 40S ribosomal protein S3a yes no 0 0 0 3.5 0.5 1 1 41.348 41.399 3 0.0014413 10207 20230619_1882_Aki_TMTPro18x_K_F3 104.2 50.233 147630 79266 176250 182190 234330 269480 207430 243500 217760 178190 247150 268020 217460 196500 233190 150990 271150 263130 136440 73497 177590 176460 238070 264990 211150 248670 222240 186300 251090 265430 223720 202700 238470 159030 259020 248760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222150000 7951 3694 7524 15082;15083 12122 12122 1 9606 Homo sapiens 0.0018058679256682808 EVQVEHIK Unmodified 980.5291 0.52909508 2311 B2RD36;Q96DG6 CMBL Carboxymethylenebutenolidase homolog yes no 0 0 0 3.5 0.5 1 1 39.369 39.418 3 0.0020851 9302 20230619_1883_Aki_TMTPro18x_K_F4 107.79 51.53 223580 174020 233580 246750 307440 307960 280980 279790 362100 235700 350910 362280 264330 300770 329990 255350 462350 435860 206750 159930 237610 243930 312630 306110 287310 286660 363200 244680 356940 359910 276360 309740 341260 267670 440910 412170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 527450000 7952 2311 7525 15084;15085 12123;12124 12124 2 9606 Homo sapiens 0.038051699261814065 EVQVSQYR Unmodified 1007.5036 0.50360861 2950 F1T0J8;Q8IZ40 RCOR2 REST corepressor 2 yes no 0 0 0 4.5 0.5 1 1 37.562 37.63 2 0.0021552 8588 20230619_1883_Aki_TMTPro18x_K_F4 131.22 98.613 68929 47889 63450 60539 69562 68765 70697 74107 91450 85846 91729 90851 96227 78645 80952 89144 107660 97463 63634 43978 64973 60230 71784 69054 71872 75627 91997 86287 94271 91585 97346 82111 84098 89859 102680 92520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77367000 7953 2950 7526 15086;15087 12125 12125 1 9606 Homo sapiens 0.00015695403772042482 EVQYLLNK Unmodified 1005.5495 0.54949617 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;B7Z766;B7Z602;Q68D25 HYOU1;DKFZp686N08236 Hypoxia up-regulated protein 1 yes no 0 0 0 7.5 0.5 2 2 55.021 55.085 2;3 0.0014945 15714 20230619_1888_Aki_TMTPro18x_K_F8 113.94 74.921 128940 106170 122000 139050 143040 184110 160410 163750 217800 141920 144760 146360 149650 125050 155190 153250 162490 144420 119180 97465 124990 138260 147690 182170 162420 168070 215480 144900 152210 147690 152880 131180 158090 153080 155270 137330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 959600000 7954 874 7527 15088;15089;15090;15091 12126;12127 12127 2 9606 Homo sapiens 0.04694340586001999 EVRPDTQYTGR Unmodified 1320.6422 0.64222736 3085 H7C0G4;Q75ME3;O43709;O43709-3 WBSCR22 Probable 18S rRNA (guanine-N(7))-methyltransferase yes no 0 0 1 4.5 0.5 1 1 32.65 32.719 3 3.637E-05 6606 20230619_1883_Aki_TMTPro18x_K_F4 123.2 101.7 104300 77109 97639 104950 125020 119870 113200 114120 142110 128870 145740 147990 155710 112640 122990 164620 168940 147330 96336 70847 100170 103880 127290 119980 115720 117380 143270 130040 149760 148230 156960 120150 128390 163490 161050 140200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 79869000 7955 3085 7528 15092;15093 12128;12129;12130 12128 3 9606 Homo sapiens -0.005268064185884214 EVSAYIK Unmodified 808.43307 0.43306943 3997;1378 Q05639;A0A2U3TZH3;Q59GP5;Q53GE9 EEF1A2 Elongation factor 1-alpha 2;Elongation factor 1-alpha no no 0 0 0 6 0.816 1 1 1 47.469 47.551 2 0.004634 12808 20230619_1886_Aki_TMTPro18x_K_F6 146.94 67.491 1406900 1054100 1224300 1255300 537500 553100 970620 1013500 1123900 1502700 1751700 1618100 1638900 1358500 1433600 1655000 1707200 1504300 1298900 967110 1248400 1242900 624590 623840 959930 1017600 1161700 1494600 1761500 1629100 1666100 1425400 1477700 1649500 1629400 1431200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2416600000 7956 1378;3997 7529 15094;15095;15096 12131;12132 12132 2 9606 Homo sapiens 0.021190220860830777 EVSDGIIAPGYEEEALTILSK Unmodified 2233.1366 0.13655965 3534;2560 B4DP06;V9HWH7;P31939;B2R7P8;P31939-2 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 0 3.5 1.12 1 1 1 1 64.778 64.801 3 3.7813E-23 20327 20230619_1883_Aki_TMTPro18x_K_F4 188.84 165.7 155050 129690 160760 161460 123640 151830 148430 148490 145350 181210 200900 206060 205980 177400 193520 228070 210950 241280 143430 118990 162270 160350 132100 154160 148280 152870 150580 182050 203780 207150 209470 186610 198170 229000 201880 228920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 967280000 7957 2560;3534 7530 15097;15098;15099;15100 12133;12134;12135 12134 3 9606 Homo sapiens 0.06931682856338739 EVSEEQPVVTLEK Unmodified 1485.7563 0.75625407 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;Q6PJY7;E9PPR5 NASP Nuclear autoantigenic sperm protein yes no 0 0 0 2.2 0.748 1 2 2 51.557 51.601 2;3 0.00018006 15182 20230619_1881_Aki_TMTPro18x_K_F2 134.98 110.05 40015 33713 43190 38258 39086 41523 39844 42225 46161 42584 49277 47171 52826 42441 39812 49431 51800 48550 37031 30902 43510 38334 40929 41771 40358 43093 46783 43161 50535 47541 53173 44312 41425 49487 49424 46134 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 748570000 7958 3605 7531 15101;15102;15103;15104;15105 12136;12137 12137 2 9606 Homo sapiens 0.03280618832991422 EVSFQSTGESEWK Unmodified 1512.6733 0.67325272 2086 A8K651;Q07021;I3L3Q7;I3L3B0 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes no 0 0 0 4 1.22 1 2 2 2 1 53.13 53.181 2;3 3.7167E-11 15581 20230619_1882_Aki_TMTPro18x_K_F3 184.11 173.32 203870 201240 213290 256340 228480 287610 245220 258410 302430 324810 311830 299270 350130 271040 292860 304610 325450 318180 188830 184580 216420 254660 236900 287690 248100 267730 305450 323930 321030 303950 353220 282490 300650 306320 311020 302090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1449600000 7959 2086 7532 15106;15107;15108;15109;15110;15111;15112;15113 12138;12139 12138 2 9606 Homo sapiens -0.06257697894989178 EVSHLNALEER Unmodified 1295.647 0.64697839 294 A0A087WYJ2;A0A024R4F4;A0A2R8Y705;Q308M6;M0R2B7;P28340;M0R3H8 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit yes no 0 0 0 2 0 1 38.862 38.928 3 0.00014802 9321 20230619_1881_Aki_TMTPro18x_K_F2 112.64 91.181 100860 78540 120680 105750 113210 138470 105210 109280 147280 106740 112850 121640 114940 114680 126470 137970 128040 112330 93391 72138 120740 104980 118110 136810 107890 113580 146180 108590 117580 122610 117930 119610 128540 136830 122380 107020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111200000 7960 294 7533 15114 12140 12140 1 9606 Homo sapiens 0.010980777241684336 EVSSADNVSVYPSVSEEPVENK Unmodified 2364.0969 0.096879676 1376 A0A8Q3SI84;A0A8Q3SI68;A0A2R8YH03;A0A8V8TMM4;A0A8V8TMN1;Q5VWN6-2;Q5VWN6 FAM208B Protein FAM208B yes no 0 0 0 2 0 1 52.816 52.849 3 0.00069123 15680 20230619_1881_Aki_TMTPro18x_K_F2 66.644 58.043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7961 1376 7534 15115 12141 12141 1 9606 Homo sapiens -0.03060488885103041 EVSTYIK Unmodified 838.44363 0.44363412 1560 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;A0A4D5RA98;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;Q9H2I7;A0A4D5RA52;A0A087WV01;Q504Z0;Q53HR1;Q6P4C9;A0A4D5RAR2;B4E2C5;Q16577;A0A4D5RA61;A0A4D5RAF1;A0A4D5RBI9;A9X7H1 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 yes no 0 0 0 6 1.29 1 1 2 1 1 45.976 46.046 2 0.0029784 11864 20230619_1887_Aki_TMTPro18x_K_F7 158.12 44.094 8323500 5868300 6653400 7051300 8689500 9168600 8421400 8375000 11293000 9927500 10434000 9156100 11033000 8916100 8933700 10818000 11432000 9213100 7677000 5385800 6930200 7051900 8863500 9094000 8592800 8649100 11306000 9932000 10760000 9328200 11141000 9306300 9268600 10746000 10899000 8775800 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 24630000000 7962 1560 7535 15116;15117;15118;15119;15120;15121 12142;12143;12144;12145;12146 12145 5 9606 Homo sapiens 0.017950047405292935 EVSVPTFSWEEIQK Unmodified 1677.825 0.82500233 3363 O95864-3;O95864 FADS2 Fatty acid desaturase 2 yes no 0 0 0 6 0 1 62.553 62.604 3 3.6879999999999997E-22 19271 20230619_1886_Aki_TMTPro18x_K_F6 225.33 180.82 316500 280830 318340 325460 182730 239840 280190 263630 289180 396310 320740 238010 398470 264300 263180 517420 400630 322100 292830 257430 321250 324040 203400 249620 277360 271340 295940 388440 330290 250330 397430 285350 278980 504130 381440 308290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236510000 7963 3363 7536 15122 12147 12147 1 9606 Homo sapiens 0.013202831327134845 EVTAAQVAR Unmodified 943.50869 0.50869399 1957 A5YKK6;A5YKK6-2;A5YKK6-3;A5YKK6-4;B4DTM8 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 4 0 1 35.291 35.339 2 0.00072728 7672 20230619_1883_Aki_TMTPro18x_K_F4 125.53 90.598 49196 24950 53427 60493 64605 75562 54744 60400 70623 49346 75568 76202 63682 55004 67708 30549 77062 70779 45415 23166 54130 58274 66007 74831 56291 62462 71134 51318 76787 75360 65566 56185 69079 33473 73598 66823 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87396000 7964 1957 7537 15123 12148 12148 1 9606 Homo sapiens 0.034679992663768644 EVTDEIVK Unmodified 931.48623 0.48622722 401 P23381;A0A024R6K8;P23381-2 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 0 0 2.5 0.5 1 1 47.035 47.113 2 0.015357 13057 20230619_1881_Aki_TMTPro18x_K_F2 93.162 36.751 40411 32587 38214 39233 45607 52329 49084 49280 65616 45418 47315 47609 54247 48480 44063 50706 58067 53893 37347 29892 39128 39252 46928 51843 49776 50438 65124 46228 49700 48274 54701 50094 45791 51083 55394 51170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134220000 7965 401 7538 15124;15125 12149 12149 1 9606 Homo sapiens 0.01774355078100598 EVTDTQMPLVAPVILPEMYK Oxidation (M) 2289.1636 0.16364279 4386 Q96P70 IPO9 Importin-9 yes yes 0 1 0 6 0 1 63.535 63.584 3 3.7133E-06 19746 20230619_1886_Aki_TMTPro18x_K_F6 96.012 78.731 30366 21662 26852 29622 28524 32278 31059 32743 33486 40880 37818 41537 32357 36186 39793 43582 34915 44833 28029 19907 27613 29290 29578 32441 31255 33627 34186 40880 38401 41939 33603 37857 40092 43737 33523 42533 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90378000 7966 4386 7539 15126 12150 12150 2755 1 9606 Homo sapiens 0.07062751871444561 EVTDTQMPLVAPVILPEMYK Unmodified 2273.1687 0.16872817 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 7.5 0.5 1 1 64.767 64.79 3 1.3872E-11 20013 20230619_1887_Aki_TMTPro18x_K_F7 137.13 126.34 82107 62769 79603 74987 49889 78788 72827 67324 77993 91525 85008 101730 102920 95431 92227 104830 103400 108820 75872 57586 80620 74795 54980 79074 72305 70253 79520 91509 87797 102530 104030 99109 94656 105390 98860 103290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143530000 7967 4386 7539 15127;15128 12151;12152 12151 2 9606 Homo sapiens 0.08307055734030655 EVTEEDLNNHFK Unmodified 1473.6736 0.67358707 1183 A0A140VJL0;Q6NVY1;B9A058;H7C126 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes no 0 0 0 3 0.816 1 1 1 45.234 45.301 3 5.3461E-07 12000 20230619_1882_Aki_TMTPro18x_K_F3 121.21 92.925 84050 70157 78059 88374 96535 106920 105400 104410 120250 104110 101610 107760 116160 96507 87114 109030 117190 109430 77683 64376 80149 87983 99071 106650 106180 106820 120920 105370 105780 108830 116730 100600 90869 109330 111780 103960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207030000 7968 1183 7540 15129;15130;15131 12153 12153 1 9606 Homo sapiens -0.044302781751639486 EVTFVPGLYK Unmodified 1151.6227 0.62266112 3433;1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9;J3KTB7 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 0 0 4.5 3.5 1 1 60.324 60.342 3 0.00032578 17909 20230619_1888_Aki_TMTPro18x_K_F8 111.61 83.594 139100 127340 140630 130620 111590 148160 127850 128120 154140 127200 117510 98209 115870 92780 125950 126160 107400 105310 128730 116580 142240 131960 118870 148030 128840 132250 154030 127800 122130 100920 118740 97676 126880 125080 102920 100250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 188150000 7969 1843;3433 7541 15132;15133 12154;12155 12155 2 9606 Homo sapiens 0.05291469308622254 EVTLIHSQVALADK Unmodified 1522.8355 0.83550744 4419 Q9BRQ8-2;Q9BRQ8 AIFM2 Apoptosis-inducing factor 2 yes no 0 0 0 6.5 0.5 1 1 50.419 50.498 3 3.8304E-05 13812 20230619_1887_Aki_TMTPro18x_K_F7 104.95 85.35 47701 40424 40726 53456 56925 70287 67311 58386 77912 71754 63696 80781 93131 75285 76510 94141 85768 80212 44064 37110 42300 53095 58206 69494 67525 60845 78244 72114 67430 81380 93316 78824 78696 93478 81934 76354 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139250000 7970 4419 7542 15134;15135 12156 12156 1 9606 Homo sapiens 0.09500310577800519 EVTPEGLQMVK Oxidation (M) 1245.6275 0.6274885 3489 P22234;P22234-2;E9PBS1;B4DGX3;D6RF62 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 1 0 5 0.707 1 2 1 48.674 48.739 2;3 6.9595E-05 13361 20230619_1883_Aki_TMTPro18x_K_F4 120.63 104 191380 173070 169190 201310 216110 210440 203610 190380 243260 212860 243250 224380 242940 188720 215540 253340 236070 254860 176910 158640 174570 201080 220310 211770 207200 196560 245500 214350 249410 226220 246540 199350 221010 253510 225800 241980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 530730000 7971 3489 7543 15136;15137;15138;15139 12157;12158 12157 2150 2 9606 Homo sapiens 0.014499853890583836 EVTPEGLQMVK Unmodified 1229.6326 0.63257388 3489 P22234;P22234-2;E9PBS1;B4DGX3;D6RF62 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 4.75 0.829 2 1 1 53.478 53.535 2;3 4.1368E-09 15246 20230619_1885_Aki_TMTPro18x_K_F5 178.46 112.93 223470 184640 201320 212780 183870 214800 202760 202460 230980 258210 255110 247300 275360 230460 251290 280850 257580 263400 206480 169290 206150 212650 193060 216810 204320 209210 234850 257610 261440 251010 279200 240950 256470 280370 246430 250340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1112100000 7972 3489 7543 15140;15141;15142;15143 12159;12160;12161 12160 3 9606 Homo sapiens 0.026942892516672146 EVTSPNSTVR Unmodified 1088.5462 0.54620171 2953 F2Z2U4;H0Y4W2;Q9Y4A5-2;Q9Y4A5;Q59FH1;A0A994J575 TRRAP Transformation/transcription domain-associated protein yes no 0 0 0 4 0 1 32.82 32.878 2 0.035623 6686 20230619_1883_Aki_TMTPro18x_K_F4 79.148 56.408 11097 4707.5 10282 13246 18671 22755 14156 12581 14804 9346 15641 18858 14817 15526 14391 8555.9 19878 18217 10224 4389.7 10659 12766 18628 22029 14549 13478 15057 9928 15996 18581 15153 15751 14909 9272.8 18954 17206 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6633600 7973 2953 7544 15144 12162 12162 1 9606 Homo sapiens 0.005470457413366603 EVTTLTADPPDGIK Unmodified 1455.7457 0.74568938 3170 K7EPJ1;Q16763;Q6NXQ4;Q2QD04;K7EM75 UBE2S Ubiquitin-conjugating enzyme E2 S yes no 0 0 0 3.5 0.5 1 1 52.702 52.744 3 7.6521E-07 15252 20230619_1883_Aki_TMTPro18x_K_F4 130.1 104.45 111420 96645 113170 118370 100490 121270 122530 100490 140850 158440 152760 146530 179400 132680 129390 165540 145630 155550 103080 88644 114680 117790 106060 121940 122820 105730 143050 156670 157240 148810 179730 139150 133550 165170 139250 147810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98793000 7974 3170 7545 15145;15146 12163 12163 1 9606 Homo sapiens 0.03604636178533838 EVTVPVFYPTEK Unmodified 1407.7286 0.72858275 245 B2R642;A8K6A6;A0A024R3I5;P43121;B3KXZ9;P43121-2 MCAM Cell surface glycoprotein MUC18 yes no 0 0 0 6.67 0.471 1 2 60.098 60.144 2;3 9.4959E-08 17868 20230619_1887_Aki_TMTPro18x_K_F7 176.95 139.76 82579 78657 83053 97930 75810 79103 97536 97633 94502 111370 109350 99573 115360 96506 108270 121280 104400 109430 76440 72134 84313 97079 79826 81867 97020 98848 97116 111410 111710 101570 117180 100960 110080 120780 99965 104040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 257360000 7975 245 7546 15147;15148;15149 12164;12165;12166 12166 3 9606 Homo sapiens 0.04102760363434754 EVTWEVLEGEVEK Unmodified 1545.7563 0.75625407 2662 B5BUB5;P05455;Q9UMH5 SSB Lupus La protein yes no 0 0 0 2.5 1.12 1 1 1 1 62.464 62.475 3 7.8139E-08 19459 20230619_1882_Aki_TMTPro18x_K_F3 150.49 140.39 686820 589340 690420 723000 624970 773760 684840 712520 821470 830610 806120 786150 846510 734980 829860 943020 868460 913040 635300 540580 700320 719860 656780 777020 691610 735260 828830 831850 829540 798630 862030 770810 846940 942290 830880 867370 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 602520000 7976 2662 7547 15150;15151;15152;15153 12167;12168;12169 12169 3 9606 Homo sapiens 0.0052061883300211775 EVTYELDHPGFQIR Unmodified 1702.8315 0.83148469 1957 A5YKK6;A5YKK6-2;A5YKK6-3;A5YKK6-4 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 4 0 1 52.133 52.157 3 1.2614E-11 14950 20230619_1883_Aki_TMTPro18x_K_F4 172.58 129.07 77581 65623 71299 89456 71377 87277 85405 87365 107750 95588 103880 106550 108630 92671 92559 117490 111530 119510 71704 60263 73077 88314 74624 88385 85989 89485 108310 96521 106970 107230 109970 97358 95592 117700 106580 113460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 328330000 7977 1957 7548 15154 12170 12170 1 9606 Homo sapiens 0.008182210840686821 EVVAEEMAHR Oxidation (M) 1185.5448 0.5448215 4057 Q5T0N5-3;Q5T0N5-4;Q5T0N5-2;Q5T0N5-5;Q5T0N5 FNBP1L Formin-binding protein 1-like yes no 0 1 0 1 0 1 31.802 31.802 3 0.001389 6649 20230619_1880_Aki_TMTPro18x_K_F1 87.066 59.053 9741.8 6817.4 10743 9325.2 11764 13969 10045 9943 13768 9479.2 10160 13816 7737.5 9009.9 10846 8221.5 14353 9634.2 9007.5 6265.6 10837 9270 12105 13675 10344 10424 13658 9746.2 10518 13645 8146 9396.7 11151 8365.1 13666 9153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18476000 7978 4057 7549 15155 12171 12171 2660 1 9606 Homo sapiens -0.04052911619078259 EVVAEVVK Unmodified 871.50148 0.50148335 1807 O60832;A0A8Q3WLC8;A0A8Q3SIY6;A0A8Q3SIS9;A0A8Q3SJE8;A0A8Q3WLD1;A0A8Q3WLG7;A0A8V8TKY9 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 0 0 0 4 0 1 48.798 48.836 2 0.0027265 13447 20230619_1883_Aki_TMTPro18x_K_F4 131.06 73.503 198830 173280 173450 204000 207450 237330 225420 224510 288330 225970 255450 238580 251030 200880 222360 296220 286760 264770 183740 158870 179030 203920 213490 237160 228120 230280 288630 228810 263290 240600 254990 213500 230570 294140 273600 251900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114310000 7979 1807 7550 15156 12172 12172 1 9606 Homo sapiens 0.0605926666595451 EVVCTENLTPWK Unmodified 1474.7126 0.71261511 1310 A0A1W2PR73;Q969N2;A0A1W2PPR6;A0A1W2PNP0;A0A1W2PPC3;A0A1W2PP57;Q969N2-5;Q969N2-4;A0A1W2PPS0;A0A1W2PRZ8;A0A1W2PR70;A0A1W2PR92;A0A1W2PRH8;A0A1W2PRV7;Q969N2-6;A0A1W2PRG1;A0A1W2PNW9;A0A1W2PPU8;H7C2Y2;A0A1W2PQ29;A0A1W2PPI8;A0A1W2PRH2;Q969N2-3 PIGT GPI transamidase component PIG-T yes no 0 0 0 7 0 1 57.767 57.82 3 0.0097122 16941 20230619_1887_Aki_TMTPro18x_K_F7 54.343 42.903 54149 51654 53592 61715 53073 57093 58949 62912 76748 66268 66569 70721 71613 60785 65937 70046 68980 76898 50117 47351 54526 61447 55342 58230 59656 63961 76754 66940 69026 71240 72663 63530 67342 70615 66025 72936 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8335300 7980 1310 7551 15157 12173 12173 1 9606 Homo sapiens -0.005752691451334613 EVVCTNCPTGTTGK Unmodified 1522.6756 0.67557768 558 A0A024R972;P11047 LAMC1 Laminin subunit gamma-1 yes no 0 0 0 6 0 1 41.04 41.135 3 1.1248E-08 10016 20230619_1886_Aki_TMTPro18x_K_F6 119.88 92.208 42647 30797 44538 44956 53419 58617 47933 54922 64645 58380 57528 66328 69856 54882 54752 59268 78376 65094 39420 28322 45219 44403 54659 58134 49182 56423 64646 59067 59941 66541 70184 57247 57259 59808 74669 61813 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41658000 7981 558 7552 15158 12174 12174 1 9606 Homo sapiens -0.06485308753212848 EVVDGLEK Unmodified 887.46001 0.46001246 1176 B8XPJ7;B8XPJ8;A0A140VJG8;P21964-2;P21964;A0A7I2V370 COMT Catechol O-methyltransferase yes no 0 0 0 2 0.816 1 1 1 47.61 47.661 2 0.0067255 13340 20230619_1881_Aki_TMTPro18x_K_F2 109.71 47 97897 78284 105480 104240 117490 123770 119940 117640 169470 128780 142140 149050 143940 125320 146540 151260 179300 170760 90568 71887 106690 103390 121170 123540 122290 120900 168620 130270 147260 149590 147060 131430 150800 152660 171180 162010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 240830000 7982 1176 7553 15159;15160;15161 12175 12175 1 9606 Homo sapiens 0.011780859066220728 EVVDPTK Unmodified 786.41233 0.41233399 2780 CON__P12763 yes yes 0 0 0 3 1 1 1 41.261 41.32 2 0.04865 10413 20230619_1881_Aki_TMTPro18x_K_F2 86.833 5.7141 + 140420 113880 248560 181130 755260 748740 367640 448840 631880 214060 447880 715170 255510 310540 432590 160800 501200 630130 130660 104790 250600 184510 733620 707050 401080 472390 619960 244870 461720 688250 276130 325600 439060 191090 479780 593060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 310030000 7983 2780 7554 15162;15163 12176;12177 12176 2 9606 Homo sapiens 0.010584317064285642 EVVECQSTSTVGGQSVK Unmodified 1793.8465 0.84654241 4397 Q96T23-2;Q96T23;H0YER1;Q96T23-3;H0YCN2 RSF1 Remodeling and spacing factor 1 yes no 0 0 0 4 0 1 43.487 43.531 3 3.7916E-05 11068 20230619_1883_Aki_TMTPro18x_K_F4 94.922 81.508 45934 29690 33127 40770 51985 45604 44156 44361 49708 45269 57136 52412 66476 52070 47626 57289 71913 64879 42320 27298 35030 40309 52240 45743 45144 45432 50619 45934 58627 52916 66642 54031 50148 57882 68522 61567 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141130000 7984 4397 7555 15164 12178 12178 1 9606 Homo sapiens -0.018626999009256906 EVVESCR Unmodified 877.39637 0.39636635 3284 O60701;O60701-2;E7ER83;E7ETF4;E7EV97;E7ER95 UGDH UDP-glucose 6-dehydrogenase yes no 0 0 0 1 0 1 31.54 31.54 2 0.037427 6605 20230619_1880_Aki_TMTPro18x_K_F1 91.9 71.618 17250 8612.2 25643 26732 44421 40346 28625 41015 36651 20412 34273 36384 24305 29394 31712 12358 41890 36020 15976 8040.7 25626 25649 44153 39753 30055 41260 36726 22233 34864 35952 25546 29636 32565 14085 39941 33983 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16557000 7985 3284 7556 15165 12179 12179 1 9606 Homo sapiens -0.047235978021149094 EVVGTFK Unmodified 778.4225 0.42250475 634 A0A024RAV0;P54687-4;P54687;P54687-5;P54687-3 BCAT1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 0 0 7 0.816 1 1 1 47.404 47.48 2 0.0030674 12381 20230619_1887_Aki_TMTPro18x_K_F7 157.52 68.926 311890 242640 281560 281610 290700 270500 311670 312760 424490 389860 418880 405940 441670 350850 370540 497190 399790 425530 288080 222530 288600 281220 301650 275560 316540 318650 425750 390410 430830 409760 446510 371450 380380 492890 382410 404840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 624900000 7986 634 7557 15166;15167;15168 12180 12180 1 9606 Homo sapiens 0.02443039431670968 EVVIVSATR Unmodified 972.5604 0.56039521 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHH9;P24752-2;A0A5F9ZHL7;E9PRQ6 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 6.5 1.12 1 1 1 1 43.892 43.96 2 0.00051064 11167 20230619_1885_Aki_TMTPro18x_K_F5 133.23 104.09 564590 447080 496220 540150 564120 611720 639700 627760 747790 593020 694550 658040 685980 600120 655190 762050 758920 711530 521440 410150 511100 538860 582780 613540 643800 639300 752910 603460 714530 663700 699190 629300 673090 760070 724800 676520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1173400000 7987 1208 7558 15169;15170;15171;15172 12181;12182 12181 2 9606 Homo sapiens 0.07301742960282809 EVVLYVK Unmodified 848.50076 0.50075507 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;B5MCE7;E9PFD4 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 0 7.5 0.5 1 1 53.648 53.715 2 0.0029383 15125 20230619_1888_Aki_TMTPro18x_K_F8 122.78 48.441 226830 190470 208020 199400 198970 250560 251390 233260 298580 271060 240050 243250 274520 227180 225760 295090 284260 268060 209630 174470 212760 201440 209130 249090 251800 240470 299190 271170 250540 247680 276820 238490 234030 293730 271300 254950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95460000 7988 607 7559 15173;15174 12183;12184 12184 2 9606 Homo sapiens 0.07044472016912096 EVVQANTVDER Unmodified 1258.6153 0.61534391 2969 F5H1K7;P58005-3;P58005 SESN3 Sestrin-3 yes no 0 0 0 1 0 1 37.233 37.233 2 1.3043E-08 8883 20230619_1880_Aki_TMTPro18x_K_F1 180.19 132.62 19518 15654 17162 23282 37380 32077 28167 28942 32025 33174 43548 40546 38796 33721 30393 25947 40711 27303 18027 14393 17962 22979 36915 31711 29048 29887 32869 33521 43894 40578 39350 34589 31591 26306 38760 25967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21679000 7989 2969 7560 15175 12185 12185 1 9606 Homo sapiens -0.003619150297708984 EVVQNFAK Unmodified 933.49198 0.4919813 1447 Q14019;A0A384MTY2;H3BT58 COTL1 Coactosin-like protein yes no 0 0 0 7 0.707 2 4 2 47.123 47.195 2;3 0.0006118 12659 20230619_1886_Aki_TMTPro18x_K_F6 131.06 90.794 874850 690010 825090 840850 1240300 1330900 1261200 1306200 1729300 1208100 1218200 1137100 1211600 994910 1165500 1384100 1418300 1192000 808380 633080 848860 843320 1256500 1307900 1283900 1332500 1713400 1225100 1273000 1153700 1234900 1051500 1201100 1373300 1353000 1135000 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 1654799999.9999998 7990 1447 7561 15176;15177;15178;15179;15180;15181;15182;15183 12186;12187;12188;12189;12190;12191;12192;12193 12186 8 9606 Homo sapiens 0.022574983804247495 EVYEEAGVK Unmodified 1022.492 0.49204087 665;4352 A0A024RBD0;B2RE29;A0A024RBG1;Q9NZJ9;Q9NZJ9-2;F8VRL4;F8VRR0;A0A0C4DGJ4;Q9NZJ9-3;Q96G61;Q8NFP7 NUDT4;NUDT11;NUDT10 Diphosphoinositol polyphosphate phosphohydrolase 2;Diphosphoinositol polyphosphate phosphohydrolase 3-beta;Diphosphoinositol polyphosphate phosphohydrolase 3-alpha no no 0 0 0 2.5 0.5 1 1 44.573 44.646 2 2.6451E-07 11967 20230619_1881_Aki_TMTPro18x_K_F2 154.12 105.36 27316 22985 27661 27127 28695 33570 28318 28432 36081 36686 48121 50618 46967 42283 35338 35465 56607 53037 25266 21076 28083 27144 29741 33340 28832 29626 36785 37062 48751 50440 47447 43539 37308 36737 53930 50202 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23661000 7991 665;4352 7562 15184;15185 12194;12195 12194 2 9606 Homo sapiens -0.018305464102354563 EVYEGEVTELTPCETENPMGGYGK Oxidation (M) 2704.152 0.15202807 1442 B5BUB1;A0A384MTR5;Q9Y265;Q9Y265-2;E7ETR0;B3KRS7 RUVBL1 RuvB-like 1 yes no 0 1 0 2.5 0.5 1 1 56.133 56.16 3 2.5409E-13 16873 20230619_1882_Aki_TMTPro18x_K_F3 122.53 115.06 20953 15789 20835 22197 19005 18529 22973 19543 18538 25600 25609 26725 27701 24372 27126 31397 30153 32304 19364 14511 21153 21839 19956 19044 22802 20076 19450 25567 26050 27004 28184 25588 27785 31475 28836 30665 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27424000 7992 1442 7563 15186;15187 12196;12197 12197 934 2 9606 Homo sapiens -0.13188186471052177 EVYELLDSPGK Unmodified 1248.6238 0.62378333 3489 P22234;P22234-2;E9PBS1;B4DGX3 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 3.5 1.12 1 1 1 1 59.161 59.185 3 7.1243E-07 18000 20230619_1883_Aki_TMTPro18x_K_F4 164.33 134.53 1771400 1501300 1553900 1635400 1360200 1636500 1527700 1568400 1772000 2030000 2194900 2126000 2191500 1808900 1871000 2479500 2220100 2267900 1636700 1375600 1594200 1641300 1434700 1653600 1539300 1619500 1809100 2029200 2231000 2144100 2221200 1911700 1930900 2467200 2121100 2156100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4240899999.9999995 7993 3489 7564 15188;15189;15190;15191 12198;12199 12199 2 9606 Homo sapiens 0.009416388868430658 EVYFAER Unmodified 912.43413 0.43413207 3616 P50238 CRIP1 Cysteine-rich protein 1 yes yes 0 0 0 2.5 0.5 1 1 44.207 44.285 2 0.011243 11537 20230619_1882_Aki_TMTPro18x_K_F3 116.9 64.908 248380 182570 216560 193110 259100 293660 367280 375390 486620 538030 689730 696290 597180 566650 654400 629820 755650 754500 229280 167340 223270 195750 268940 291210 367660 381910 496810 539650 694170 695250 615560 591930 669880 638970 722020 715310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 402060000 7994 3616 7565 15192;15193 12200;12201 12201 2 9606 Homo sapiens -0.025587635450051494 EVYLHAIVR Unmodified 1098.6186 0.61857879 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32;H0Y426 VARS Valine--tRNA ligase yes no 0 0 0 7.5 0.5 1 1 45.504 45.532 3 7.6418E-07 11499 20230619_1887_Aki_TMTPro18x_K_F7 135.79 89.633 160980 118580 147840 150150 138890 160400 161960 167080 186220 166930 145440 140730 149340 127840 160790 148310 158470 142230 148660 108870 151160 149210 145700 161550 162730 170180 186720 167930 151340 143600 152860 133400 163090 148430 151530 135220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144660000 7995 725 7566 15194;15195 12202;12203;12204 12202 3 9606 Homo sapiens 0.07321424605561333 EVYPEAR Unmodified 862.41848 0.418482 1418 A0A384ME24;O00422;O00422-2;H7BZW6;U3KPY7 SAP18 Histone deacetylase complex subunit SAP18 yes no 0 0 0 1.5 0.5 1 1 35.667 35.695 2 0.0051635 8247 20230619_1880_Aki_TMTPro18x_K_F1 143 63.551 209160 139700 196120 228700 297140 300160 262150 264460 399070 256380 298890 292480 301430 259010 258480 197850 338560 318600 193090 128700 202010 224390 299780 297200 270390 272380 394350 261000 311340 293980 305640 265230 267640 206790 323020 301400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 472860000 7996 1418 7567 15196;15197 12205;12206 12205 2 9606 Homo sapiens -0.018230500620575185 EVYQQQQYGSGGR Unmodified 1498.6801 0.68006943 4406 Q99729-3;D6R9P3;D6RD18;B4DMY3;D6RBZ0;Q53F64;Q99729-2;Q99729-4;Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 4.25 0.829 1 1 2 36.267 36.337 2;3 2.5347999999999998E-21 8030 20230619_1883_Aki_TMTPro18x_K_F4 237.53 211.59 188010 133750 162520 168500 191450 199450 189050 188100 226640 241140 247930 237500 272720 213930 198510 250220 271460 219310 173510 122810 167660 167720 196530 199120 191930 194330 229750 240750 254290 240480 273950 223410 207450 249020 258660 208820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1414100000 7997 4406 7568 15198;15199;15200;15201 12207;12208;12209 12208 3 9606 Homo sapiens -0.04932340223786014 EWAFEESK Unmodified 1024.4502 0.45017606 4586 Q9NRN7;E9PLW6 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes no 0 0 0 3.5 0.5 1 1 52.725 52.766 2 0.0024576 15402 20230619_1882_Aki_TMTPro18x_K_F3 126.41 86.703 168590 136540 151700 157880 138680 191950 167060 162000 238360 224210 207450 226210 247620 207810 174250 270350 279150 280570 155750 125200 155400 158150 146320 190760 168970 169230 237610 223430 216080 228910 248080 218330 184790 270930 266090 266370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 131720000 7998 4586 7569 15202;15203 12210;12211 12210 2 9606 Homo sapiens -0.06107102098769701 EWCDAFL Unmodified 939.37965 0.37965365 340 A0A024R5H0;O75531;B2R4V4 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed yes no 0 0 0 2.5 1.12 1 1 1 1 64.66 64.672 2 0.010769 20659 20230619_1881_Aki_TMTPro18x_K_F2 117.54 103.48 597310 511530 541170 580440 549090 667850 630880 681240 922020 731920 658170 628250 703200 611160 653680 741590 715850 740510 552050 468860 554860 581850 573070 668950 640230 696040 911920 734320 689400 642040 714190 637990 669500 742830 684490 703260 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3136499999.9999995 7999 340 7570 15204;15205;15206;15207 12212;12213;12214 12212 3 9606 Homo sapiens -0.09246098688083748 EWDFDLK Unmodified 951.4338 0.43379771 3034 H0Y9X1;Q96EY4 TMA16 Translation machinery-associated protein 16 yes no 0 0 0 4.5 0.5 1 1 60.633 60.659 2 0.011157 18589 20230619_1883_Aki_TMTPro18x_K_F4 117.02 72.884 123030 98526 119420 110840 91834 131570 118050 118100 144180 154040 141180 136270 160920 132360 134490 160860 144810 163430 113720 90323 121180 111250 98560 131120 118360 122520 145370 153230 145800 139020 162320 138230 137950 161260 138590 155130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87868000 8000 3034 7571 15208;15209 12215 12215 1 9606 Homo sapiens -0.04386183264864485 EWDLLNENIMLLSK Oxidation (M) 1732.8706 0.87057232 1088 A0A0S2Z489;O00232-2;O00232;A0A0S2Z476 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 1 0 7 0 1 64.695 64.721 3 3.4103E-05 19973 20230619_1887_Aki_TMTPro18x_K_F7 102.28 76.687 48959 40165 45465 54925 61062 56565 59827 48614 56720 59146 58788 61350 58706 49601 56668 68567 57845 69934 45245 36890 46758 54246 62059 56918 60268 50544 58079 59277 60246 61786 59818 52559 57798 68634 55418 66365 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112470000 8001 1088 7572 15210 12216 12216 650 1 9606 Homo sapiens 0.033451853234510054 EWFLQAAK Unmodified 991.51272 0.51271674 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;B4DVJ0;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;A0A0J9YXP8;K7ERC6 GPI Glucose-6-phosphate isomerase yes no 0 0 0 3.67 3.09 1 1 1 59.34 59.358 2;3 0.0027891 18192 20230619_1880_Aki_TMTPro18x_K_F1 92.439 71.569 137600 121470 144650 137370 139090 183700 142430 141920 199770 140960 132230 135090 146530 131160 156660 153840 159230 145560 127350 111320 146260 138050 145340 181230 145180 147830 197440 142530 139530 137290 149670 136590 159240 153800 152230 138390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 196330000 8002 1326 7573 15211;15212;15213 12217;12218;12219 12217 3 9606 Homo sapiens 0.016620887600765855 EWGSGSDTLR Unmodified 1106.4993 0.49925152 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 0 0 3 0 1 42.787 42.853 2 9.4959E-05 10830 20230619_1882_Aki_TMTPro18x_K_F3 170.69 113.97 361500 332850 410310 392680 364940 479350 430900 411340 481880 556580 661960 815370 773090 687970 602840 500690 702350 877760 334900 305120 412070 392860 384920 476450 432450 428960 495440 562510 676440 810570 777480 704260 620930 527660 672250 829060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 347020000 8003 1076 7574 15214 12220 12220 1 9606 Homo sapiens -0.049738138098064155 EWLEGEDLSEELKK Unmodified 1703.8254 0.82539626 3873 Q14008-2;Q14008;Q14008-3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 1 4.5 0.5 1 1 59.484 59.538 3 7.8716E-10 18183 20230619_1883_Aki_TMTPro18x_K_F4 139.86 122.11 55641 46756 57319 57550 41402 56659 56223 53602 56499 65619 62782 62363 75516 58684 66563 72815 65789 74129 51471 42892 57861 57230 44731 57270 55868 55310 57846 65561 64681 63342 76195 61439 67837 73000 63012 70364 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8418800 8004 3873 7575 15215;15216 12221;12222 12221 2 9606 Homo sapiens 0.0016365806191060983 EWLLGMLGAESAK Unmodified 1403.7119 0.71188683 3433 P11388;P11388-2;P11388-3;P11388-4 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 2 0 1 64.509 64.517 3 0.089932 20629 20230619_1881_Aki_TMTPro18x_K_F2 36.292 21.731 5447.2 5441.2 4656.1 4112.6 5456.1 5555.8 4653.8 6019 7097.1 5522.9 5198.6 7230.7 7490.3 6657.7 5405.1 8947.3 6744.3 9483.9 5037.8 4969.3 4802.9 4290.4 5586 5525.9 4817.2 6097.9 7016.7 5662.8 5534.8 7243.7 7477.3 7005.9 5627.6 8972.4 6458.9 8992.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27892000 8005 3433 7576 15217 12223 12223 1 9606 Homo sapiens 0.02617936205820115 EWLNSCDLK Unmodified 1163.5281 0.5281088 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 5.5 0.5 1 1 54.791 54.863 3 2.859E-06 15967 20230619_1886_Aki_TMTPro18x_K_F6 173.37 146.7 232560 200170 216130 228340 221670 256530 231170 240490 292610 273260 265710 260830 287000 239420 267250 300480 274260 294030 214980 183480 221070 228710 230300 256920 234480 247620 293590 274100 274780 264690 291280 250940 272690 300520 262480 279270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 185490000 8006 4746 7577 15218;15219 12224;12225 12225 2 9606 Homo sapiens -0.04711412505048429 EWLTNFMEDR Unmodified 1339.5867 0.58668632 3433;1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;Q59H80;P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 0 0 6 1.41 1 1 1 1 1 62.894 62.926 2 4.5401E-05 19185 20230619_1885_Aki_TMTPro18x_K_F5 147.3 109 118690 96474 102660 112280 75770 124700 100910 101790 159210 129680 115360 120470 144220 109720 112570 141640 131920 139010 109620 88465 105310 112250 81992 124540 102090 106330 157090 129400 121670 122340 144720 115300 116260 141580 126080 132030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 339520000 8007 1843;3433 7578 15220;15221;15222;15223;15224 12226;12227 12227 2 9606 Homo sapiens -0.06952355930570775 EWLTNFMEDRR Unmodified 1495.6878 0.68779734 3433;1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;Q59H80;P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 0 1 7.5 0.5 1 1 58.133 58.182 3 2.9457E-09 17072 20230619_1887_Aki_TMTPro18x_K_F7 184.58 149.69 99216 90997 101890 94060 72860 105450 86497 89574 125100 103780 86334 88762 107920 88674 93157 109450 94994 99836 91832 83318 102810 94951 78611 105390 87655 92977 123710 103750 91353 90783 108750 92591 95180 109080 90905 94909 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41609000 8008 1843;3433 7579 15225;15226 12228;12229 12229 2 9606 Homo sapiens -0.04021904227874984 EWLVAVK Unmodified 843.48544 0.48543935 4243 Q8NBJ5;M0QX72;A0A8I5QKL8;A0A8I5QL08 COLGALT1 Procollagen galactosyltransferase 1 yes no 0 0 0 1 0 1 58.385 58.385 2 0.02183 17834 20230619_1880_Aki_TMTPro18x_K_F1 108.24 60.331 109870 95193 108370 93494 108560 139440 121880 111680 134070 119390 124650 126590 132510 106030 143540 126200 136280 135060 101620 87140 110160 95238 113260 136880 122490 116210 135490 120520 128740 127480 135460 111160 145270 127050 130460 128190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139130000 8009 4243 7580 15227 12230 12230 1 9606 Homo sapiens 0.05743605219697656 EWMPVTK Oxidation (M) 905.43169 0.43168922 3457 P15880;Q6IPX5;Q3KQT6;Q8N5L9;E9PQD7;E9PMM9;E9PPT0;Q8NI61;D3DU83 RPS2;OK/KNS-cl.7 40S ribosomal protein S2 yes no 0 1 0 6.5 1.12 1 1 1 1 47.056 47.129 2 0.040883 12231 20230619_1887_Aki_TMTPro18x_K_F7 84.568 49.744 647110 563960 577120 634480 716280 756000 719260 722270 884580 743040 792430 751220 783520 631060 733640 810970 808710 783770 598080 516840 594510 636680 733200 754710 730000 740650 887770 750350 816680 758490 797430 664570 751450 810330 772870 744810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 520970000 8010 3457 7581 15228;15229;15230;15231 12231;12232 12232 2108 2 9606 Homo sapiens -0.02480935274309104 EWMPVTK Unmodified 889.43677 0.4367746 3457 P15880;Q6IPX5;Q3KQT6;Q8N5L9;E9PQD7;E9PMM9;E9PPT0;Q8NI61;D3DU83 RPS2;OK/KNS-cl.7 40S ribosomal protein S2 yes no 0 0 0 7.5 0.5 1 1 52.624 52.697 2 0.016498 14701 20230619_1888_Aki_TMTPro18x_K_F8 109.86 60.273 1204900 1061800 1157900 1118400 1196300 1398400 1316300 1253700 1498500 1461900 1308500 1291600 1616300 1193300 1275100 1567500 1550500 1453300 1114300 972490 1180600 1129100 1243600 1389800 1325700 1296200 1509600 1461400 1364600 1315800 1622700 1254900 1319300 1561900 1480200 1381900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1322600000 8011 3457 7581 15232;15233 12233;12234 12234 2 9606 Homo sapiens -0.01236631411700273 EWNDSTSVQNPTR Unmodified 1532.6855 0.68554874 4733 Q9Y3Z3;Q9Y3Z3-4;Q9Y3Z3-3;A0A2R8YDI8 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes no 0 0 0 3 0 1 41.303 41.362 2 7.7594E-11 10163 20230619_1882_Aki_TMTPro18x_K_F3 188.29 171.26 17405 14637 16075 16614 19230 23922 18174 19045 23147 20577 22983 22642 24820 17194 22249 20602 25598 23026 16087 13417 16493 16712 19729 23519 18542 19827 23289 20783 23664 22706 25127 18117 22843 20790 24442 21854 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21157000 8012 4733 7582 15234 12235 12235 1 9606 Homo sapiens -0.05948661431966684 EWQELDDAEK Unmodified 1261.5463 0.54626129 3840 Q59EG8;Q13200;B4DM22;Q9NSM5;Q13200-3;Q13200-2 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 2 0 1 52.244 52.283 2 0.00015433 15436 20230619_1881_Aki_TMTPro18x_K_F2 124.1 75.307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8013 3840 7583 15235 12236 12236 1 9606 Homo sapiens -0.07404999049344951 EWQHEEFYR Unmodified 1322.568 0.56799978 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q53FS6;Q5CAQ4;I3L0K7;I3L239 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 3 0.816 1 1 1 42.62 42.683 3 9.9479E-07 10756 20230619_1882_Aki_TMTPro18x_K_F3 187.1 161.72 162340 130430 173960 176950 153820 181760 180140 191550 255040 185640 191930 183770 185620 155740 192460 179520 201250 192180 150180 119790 175480 174940 162260 183590 182430 194830 252820 188000 199570 185710 190000 162880 195990 180780 192400 182430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 461170000 8014 1211 7584 15236;15237;15238 12237 12237 1 9606 Homo sapiens -0.08038149510116455 EWSGLLEELAR Unmodified 1301.6616 0.66156582 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;V9GYV7;A0A7I2V5S1;Q5VSR5 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 5 0 1 64.036 64.082 3 0.059659 19803 20230619_1885_Aki_TMTPro18x_K_F5 43.549 31.022 6746.5 6515.2 8346 8743.2 7278.1 8959.1 6705.4 6766.8 8078 8539.5 9183.5 7549.4 9838.2 7865.9 8078.5 8583.2 8602.8 11136 6257.6 5979.4 8330.7 8646 7634.4 8990.4 6844 7114.7 8200.1 8508.5 9385.7 7724.9 9931.7 8150.4 8278.2 8754.2 8243.6 10540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26764000 8015 1831 7585 15239 12238 12238 1 9606 Homo sapiens 0.022801498723310942 EWTCPNLK Unmodified 1046.4855 0.48551571 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;A0A0C4DG79;F8W881;Q9NX05 FAM120A;FAM120C Constitutive coactivator of PPAR-gamma-like protein 1;Constitutive coactivator of PPAR-gamma-like protein 2 yes no 0 0 0 7 0 1 50.475 50.556 2 0.040573 13833 20230619_1887_Aki_TMTPro18x_K_F7 74.486 52.98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8016 1839 7586 15240 12239 12239 1 9606 Homo sapiens -0.03586762842610369 EWVAPEK Unmodified 857.42832 0.42831841 3222 O14744;O14744-2;B2RDD7;O14744-5;O14744-3;O14744-4;B4DV00;H0YJD3 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed;Protein arginine N-methyltransferase 5 yes no 0 0 0 4.5 0.5 1 1 47.755 47.813 2 0.06399 12978 20230619_1883_Aki_TMTPro18x_K_F4 83.265 27.589 228700 162310 199100 232480 263020 326360 288950 273740 372450 266540 309400 309710 309860 243010 273660 267200 323410 306180 211070 149240 205980 230080 269310 321470 292210 283080 371790 271320 320380 310160 314430 254280 281610 270350 308840 290460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146550000 8017 3222 7587 15241;15242 12240 12240 1 9606 Homo sapiens -0.006098620566717727 EWVESMGGK Oxidation (M) 1037.4488 0.44879585 1242 B4E0U6;A0A140VKA6;P50502;Q0IJ56;Q3KNR6;Q8NFI4;Q1XBU7 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 0 1 0 4 0 1 44.906 44.95 3 0.013535 11695 20230619_1883_Aki_TMTPro18x_K_F4 65.347 41.192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8018 1242 7588 15243 12241 12241 783 1 9606 Homo sapiens -0.06843059459151846 EWVESMGGK Unmodified 1021.4539 0.45388123 1242 B4E0U6;A0A140VKA6;P50502;Q0IJ56;Q3KNR6;Q8NFI4;Q1XBU7 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 0 0 0 5 0.894 2 1 2 52.002 52.066 2;3 1.0056E-10 14967 20230619_1883_Aki_TMTPro18x_K_F4 172.21 111.43 267980 235320 252270 258390 242960 332190 280160 277660 353110 327230 335870 347160 369860 301780 323020 336060 357440 367920 247790 215600 257550 260070 254760 328960 282590 288720 354890 328780 346940 349890 374100 314720 331260 338930 341730 349070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 646960000 8019 1242 7588 15244;15245;15246;15247;15248 12242;12243;12244;12245 12242 4 9606 Homo sapiens -0.05598755596531646 EWVNLYHSAAAGR Unmodified 1472.7161 0.71606101 1957 A5YKK6;A5YKK6-2;A5YKK6-3;B4DYL7;H3BMZ2 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 1.5 0.5 1 1 49.372 49.401 3 5.4255E-06 14190 20230619_1881_Aki_TMTPro18x_K_F2 100.11 84.91 57804 43428 64233 67980 61582 69915 66590 69509 91116 80120 86604 80617 93262 82420 75426 102050 112330 100670 53471 39965 64699 66631 64349 70508 67627 71319 91226 80461 89291 81949 94193 85987 79189 102070 107040 95676 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79784000 8020 1957 7589 15249;15250 12246 12246 1 9606 Homo sapiens -0.0013883825624816382 EWYFGNADK Unmodified 1128.4876 0.4876242 3295 O75165;H0Y8Q2 DNAJC13 DnaJ homolog subfamily C member 13 yes no 0 0 0 6 0 1 55.469 55.545 2 0.0033353 16287 20230619_1886_Aki_TMTPro18x_K_F6 98.048 58.003 28568 21018 33441 29236 28243 32370 29455 31979 40369 36531 38208 36013 42204 30796 36750 42590 36752 35446 26437 19316 33459 28898 29796 32477 29989 32808 40418 36667 39457 36427 42650 32576 37499 42194 35155 33747 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15527000 8021 3295 7590 15251 12247 12247 1 9606 Homo sapiens -0.07148010833157059 EWYGYHFPELVK Unmodified 1566.7507 0.75071518 2138 A8K9K6;O00567;A0PJ92;A0A494C128;Q5JXT2 NOP56 Nucleolar protein 56 yes no 0 0 0 8 0 1 60.821 60.854 3 0.0082452 18123 20230619_1888_Aki_TMTPro18x_K_F8 71.085 59.645 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8022 2138 7591 15252 12248 12248 1 9606 Homo sapiens -0.009990151681677162 EWYQETHEK Unmodified 1248.5411 0.54111633 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 3 0.816 1 1 1 41.083 41.143 3 0.00023748 10028 20230619_1883_Aki_TMTPro18x_K_F4 130.01 106.33 673800 538190 621430 647360 762340 749320 762020 748500 965280 820790 957010 975400 883830 817050 899220 894890 1013800 1014100 622550 493690 637820 646260 780380 750260 774510 766670 970940 830620 979250 977760 905650 851920 920400 904790 968870 961890 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 934090000 8023 630 7592 15253;15254;15255 12249;12250;12251 12251 3 9606 Homo sapiens -0.07321258121282881 EYAEDDNIYQQK Unmodified 1514.6525 0.65251728 4350 Q96FW1;Q659F9;F5H6Q1;B4DPD5;F5GYN4;F5GYJ8 OTUB1;DKFZp564E242 Ubiquitin thioesterase OTUB1 yes no 0 0 0 2 0.816 1 1 1 46.55 46.602 3 5.238E-18 12853 20230619_1881_Aki_TMTPro18x_K_F2 186.74 166.08 531430 389890 485210 515720 548490 559110 542540 523330 583530 627270 729060 727890 734830 678110 594820 747780 823290 737620 490730 358130 497790 510980 564290 561360 548810 540020 598120 631430 741260 732830 743650 704470 620730 749390 784920 701010 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 958790000 8024 4350 7593 15256;15257;15258 12252;12253;12254 12253 3 9606 Homo sapiens -0.08422288274664425 EYAENIGDGR Unmodified 1122.4942 0.49416614 814 A0A087WUB9;Q8WYA6;Q8WYA6-3;Q8WYA6-2;Q8WYA6-4 CTNNBL1 Beta-catenin-like protein 1 yes no 0 0 0 1.5 0.5 1 1 38.636 38.669 2 0.00048731 9472 20230619_1880_Aki_TMTPro18x_K_F1 123.11 101.65 199200 151790 194900 194530 255670 293510 232340 252530 325170 243490 283810 255980 273230 249380 232510 280440 333980 302790 184080 139360 199280 194210 260400 288260 238480 260410 324090 247190 292400 259280 277520 259070 243000 282430 318360 287470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 202600000 8025 814 7594 15259;15260 12255;12256 12255 2 9606 Homo sapiens -0.06218117672437984 EYAQVFR Unmodified 911.45012 0.45011648 1411;3506 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;P35221-3;B3KSR8;E5RJP7;E5RGD2;A0A087WZL6;E5RGU3;E5RHJ5;E5RFG3;E5RFK9;B9A010;E5RFM5;P26232-2;P26232-5;P26232;P26232-3;Q49AD3;F6KRI5;A0A0A0MRI5;P26232-4;P26232-6;A0A0A0MTJ6 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 0 6 0.816 1 1 1 45.375 45.459 2 0.029782 11853 20230619_1886_Aki_TMTPro18x_K_F6 101.69 74.57 345000 290140 327960 328330 344670 395760 366420 372920 483820 411520 402180 365030 461010 372710 335310 485050 458870 426130 318930 265950 334840 329440 357630 394580 371800 383470 482910 412670 418620 373270 462700 390210 350810 481880 437620 405490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 322350000 8026 1411;3506 7595 15261;15262;15263 12257 12257 1 9606 Homo sapiens -0.009150573080887625 EYAVNEVVAGIK Unmodified 1290.682 0.68196691 2434 B4DXQ8;B3KWX6;Q53EY5;B3KX14;Q15014 MORF4L2 Mortality factor 4-like protein 2 no no 0 0 0 6 0 1 57.701 57.77 2 0.00018399 17185 20230619_1886_Aki_TMTPro18x_K_F6 131.17 92.151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8027 2434 7596 15264 12258 12258 1 9606 Homo sapiens 0.048253205321543646 EYDELAETQGKLEEK Unmodified 1780.8367 0.83668923 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5KV76;A0A8I5KRF4;A0A8I5KSH0;A0A8I5KVZ4;A0A8I5KQU6;A0A8I5KRC9;A0A8I5KTR5;A0A8I5KPV0 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 1 2.5 0.5 1 1 52.215 52.267 3 9.3734E-14 15451 20230619_1881_Aki_TMTPro18x_K_F2 171.08 123.88 191430 192230 193060 189450 168250 168500 183950 184340 167740 243210 238940 209720 237790 184710 239720 245600 237420 211320 177270 175880 195540 191470 176930 172540 184240 188820 174980 241430 241620 213660 242640 194650 243630 243910 227000 201170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127430000 8028 1785 7597 15265;15266 12259;12260 12259 2 9606 Homo sapiens -0.0224956463464423 EYDPVEAR Unmodified 977.44543 0.44542503 702 A0A024RC33;Q15555-4;Q15555-5;Q15555-3;Q15555;K7EL66;K7ERD8;Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes no 0 0 0 1 0 1 38.839 38.839 2 0.00083568 9566 20230619_1880_Aki_TMTPro18x_K_F1 155 110.6 65322 55815 62457 60192 57006 58061 55004 53203 70736 95114 96033 79860 103430 75158 66089 123060 104420 92362 60397 51136 63568 60435 59588 58817 56112 55811 72297 93391 97488 81717 103500 80242 70291 120990 99452 88096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69646000 8029 702 7598 15267 12261 12261 1 9606 Homo sapiens -0.04419986241521201 EYDSISR Unmodified 868.39266 0.39266118 109 A0A024R0R9;P54920;M0R0Y2;M0R213 NAPA Alpha-soluble NSF attachment protein yes no 0 0 0 2 0 1 35.857 35.913 2 0.0050551 8041 20230619_1881_Aki_TMTPro18x_K_F2 143.85 105.7 120750 66483 133510 139680 180640 190040 147330 179550 185400 152810 219400 216420 192170 194370 177350 125700 245480 210110 111520 61538 135290 135570 182960 187970 151780 183330 187890 157850 222250 215990 196540 197540 184050 132360 233970 198800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89448000 8030 109 7599 15268 12262 12262 1 9606 Homo sapiens -0.046799443043141764 EYDVAVEAIR Unmodified 1163.5823 0.58225287 3977 Q68DW7;Q4LE48;Q8WVM7-2;Q8WVM7;B4E2Q7;H7C595 DKFZp781D1416;STAG1 variant protein;STAG1 Cohesin subunit SA-1 yes no 0 0 0 2 0 1 50.432 50.484 2 0.0026946 14680 20230619_1881_Aki_TMTPro18x_K_F2 95.642 73.151 79829 62368 64323 81714 80512 84010 80363 85616 101340 95624 104110 96375 95873 77086 89757 111030 102300 112730 73676 57266 66973 80935 82377 84820 81689 87611 102150 96125 106260 97213 97799 81976 92196 111050 97829 107010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40711000 8031 3977 7600 15269 12263 12263 1 9606 Homo sapiens 0.007005029181755162 EYDVAVQAIK Unmodified 1134.5921 0.59208927 1775 A0A8I5KVF8;Q6MZM4;Q6MZP3;Q8N3U4;Q8N3U4-2;B2R8Y6;Q6AI02;Q6MZM3;B1AMT4 DKFZp686P16143;DKFZp686I05169;STAG2;DKFZp686P168;DKFZp686C21148 Cohesin subunit SA-2 yes no 0 0 0 4 0 1 53.21 53.23 3 0.038398 15461 20230619_1883_Aki_TMTPro18x_K_F4 57.785 41.561 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8032 1775 7601 15270 12264 12264 1 9606 Homo sapiens 0.030176909235706262 EYEAAVEQLK Unmodified 1178.5819 0.58191851 4603 Q9NVI7-2;Q9NVI7-3;Q96T67;Q5T9A4;H0Y2W2 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B yes no 0 0 0 3 0 1 53.607 53.66 3 0.0017788 15776 20230619_1882_Aki_TMTPro18x_K_F3 87.298 50.964 108280 91796 113490 115360 125910 130500 135640 132630 161280 146630 144540 146280 170980 132320 143240 165680 153030 156970 100180 84225 115060 114780 130000 130890 136970 135710 162210 147460 150240 148070 172260 138770 146810 165410 146350 149170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103210000 8033 4603 7602 15271 12265 12265 1 9606 Homo sapiens -0.00022916801685823884 EYEAEGIAK Unmodified 1008.4764 0.47639081 1223 Q9HCC0;Q9HCC0-2;A0A804HLJ9;A0A140VK29;A0A804HKE8;A0A804HJ24;A0A804HK37;A0A804HJ84;A0A804HJ31;A0A804HL02;A0A804HJL2;A0A804HJC1;A0A804HKH3 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 2 0 1 44.33 44.413 2 9.7522E-07 11874 20230619_1881_Aki_TMTPro18x_K_F2 144.09 92.093 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8034 1223 7603 15272 12266 12266 1 9606 Homo sapiens -0.027508329272677656 EYEAQQQYR Unmodified 1213.5364 0.53636531 1135 B4DRU9;A0A0S2Z5L1;Q9NUQ8-2;Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes no 0 0 0 2 0 1 34.457 34.514 2 4.5038E-05 7497 20230619_1881_Aki_TMTPro18x_K_F2 164.57 134.38 23785 14125 24993 27999 32097 29295 32331 31542 45618 30274 35343 29219 35366 33730 24782 23208 38437 37884 21965 13057 25410 27130 32753 29568 32977 32035 45256 30674 36684 29868 35631 34103 26127 24322 36640 35829 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51877000 8035 1135 7604 15273 12267 12267 1 9606 Homo sapiens -0.061861422640504315 EYEATLEECCAK Unmodified 1501.6065 0.60649506 2776 CON__P02769 yes yes 0 0 0 2.5 1.26 2 1 1 2 47.705 47.752 2;3 2.6976E-27 13442 20230619_1880_Aki_TMTPro18x_K_F1 230.65 204.14 + 748760 1137200 1315800 753670 3172800 4096200 2024700 1845200 3185800 1376800 1401100 1667300 1082900 1202600 1222400 1449700 1895500 2474000 700400 1036700 1315100 836380 3123400 3835600 2140600 2025100 3104200 1431500 1509300 1663000 1125800 1269300 1279200 1508800 1811100 2336900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2561600000 8036 2776 7605 15274;15275;15276;15277;15278;15279 12268;12269;12270;12271;12272;12273 12269 6 9606 Homo sapiens -0.12424392772732062 EYEEEER Unmodified 982.38797 0.38796973 437 A0A024R7B7;Q16543;Q6FG59;K7EQA9;K7EKQ2;A1L0W4;K7EIU0;K7EL68 CDC37;MBD5 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 0 0 1 0 1 31.205 31.205 2 0.00083741 6397 20230619_1880_Aki_TMTPro18x_K_F1 177.71 158.07 18662 5806.9 28158 28198 52108 47263 26389 37362 26098 18212 36690 47785 24215 31338 38103 7150.2 41056 37738 17262 5517.3 28152 26827 51432 46086 28139 38314 26997 20327 36701 46534 25839 31561 38487 9395.2 39230 35531 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34441000 8037 437 7606 15280 12274 12274 1 9606 Homo sapiens -0.10392873237742606 EYELLSDELNQK Unmodified 1479.7093 0.70930387 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 3 0.816 1 1 1 59.608 59.623 3 2.5156E-07 18491 20230619_1881_Aki_TMTPro18x_K_F2 160.67 97.494 101140 88924 92790 106590 82207 101510 97452 105290 116990 119900 115100 107680 120250 98597 110250 120980 116820 122170 93504 81541 94887 106130 86767 103110 98025 107680 118040 120010 118350 109590 122060 103230 112710 121250 111750 116000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 261020000 8038 2727 7607 15281;15282;15283 12275;12276 12275 2 9606 Homo sapiens -0.011362407181422896 EYEPEMGK Oxidation (M) 997.40626 0.40626233 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9;Q8N3X5;O14983-2;O14983;Q7Z675;Q7Z6E5;A8K9K1;Q93084-3;Q93084-5;Q93084-6;Q93084-1;Q93084-7;Q93084;Q93084-4;H3BVB2 ATP2A2;ATP2A1;DKFZp779O2152;DKFZp779G2251;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 0 1 0 2 0 1 38.558 38.624 2 0.052353 9157 20230619_1881_Aki_TMTPro18x_K_F2 68.383 54.225 30681 24845 33001 32478 37200 33648 33341 35733 49428 35002 40394 45287 44681 38919 41302 41677 46722 39743 28386 22809 33377 32193 38169 34001 34344 36342 49042 35754 42087 45283 45321 40484 42355 41738 44602 37794 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22540000 8039 1076 7608 15284 12277 12277 639 1 9606 Homo sapiens -0.09254454587392047 EYEPEMGK Unmodified 981.41135 0.41134771 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9;Q8N3X5;O14983-2;O14983;Q7Z675;Q7Z6E5;A8K9K1;Q93084-3;Q93084-5;Q93084-6;Q93084-1;Q93084-7;Q93084;Q93084-4;H3BVB2 ATP2A2;ATP2A1;DKFZp779O2152;DKFZp779G2251;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 0 0 0 2.5 0.5 1 1 44.015 44.091 2 0.00026614 11722 20230619_1881_Aki_TMTPro18x_K_F2 167.9 133.82 213740 169380 196320 230140 231980 249450 233550 220580 321940 275030 309110 298140 332010 271980 256480 314400 348400 329330 197470 155580 201620 227570 238320 250110 238060 228870 322330 275920 318550 300810 334550 283730 267510 315940 332330 312710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123180000 8040 1076 7608 15285;15286 12278;12279 12278 2 9606 Homo sapiens -0.08010150724783216 EYEQELSDDLHVER Unmodified 1760.7853 0.78532236 262 A0A024R3U3;Q7Z7F7;Q7Z7F7-2;X6R631 MRPL55 39S ribosomal protein L55, mitochondrial yes no 0 0 0 1 0 1 50.017 50.017 3 2.0962E-22 14369 20230619_1880_Aki_TMTPro18x_K_F1 180.54 154.42 37332 33031 40902 47497 46216 55895 44826 43040 47545 46191 41814 44326 48865 34992 37797 47112 44422 57241 34565 30347 41378 46852 47573 55563 45364 44954 48087 46464 43490 44756 49084 37099 39051 47678 42527 54214 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127900000 8041 262 7609 15287 12280 12280 1 9606 Homo sapiens -0.06463888608664092 EYERENVDTFEASVK Unmodified 1814.8323 0.83227255 72 B4DZQ5;A0A024QZY5;Q13523;H0YDJ3 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 0 0 1 3 0 1 48.106 48.186 3 0.035767 13320 20230619_1882_Aki_TMTPro18x_K_F3 55.975 36.652 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8042 72 7610 15288 12281 12281 1 9606 Homo sapiens -0.04255029057549109 EYEVGDPGQR Unmodified 1148.5098 0.5098162 1061 A0A0S2Q0B1;O14497;O14497-2;H0Y488;A0A1B0GTU5;O14497-3;Q96SM7;Q8NC65 ARID1A AT-rich interactive domain-containing protein 1A yes no 0 0 0 1 0 1 37.634 37.634 2 0.00035379 9042 20230619_1880_Aki_TMTPro18x_K_F1 111.82 98.102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8043 1061 7611 15289 12282 12282 1 9606 Homo sapiens -0.05849831155364882 EYFGAFGEIENIELPMDTK Oxidation (M) 2218.014 0.014001669 756;3227 A0A087WUK2;A0A024RDB5;O14979;B4DTA2;O14979-2;O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like no no 0 1 0 6 0.816 1 1 1 64.003 64.043 3 5.0881E-15 19763 20230619_1885_Aki_TMTPro18x_K_F5 162.26 146.67 44270 34359 38043 52403 53610 54040 54127 45771 48977 46730 54990 55197 49974 45843 48356 63399 50849 60010 40875 31604 39484 51407 54417 54327 54360 47405 50417 47439 55928 55372 51107 48496 49429 63191 48691 57001 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223450000 8044 756;3227 7612 15290;15291;15292 12283 12283 459 1 9606 Homo sapiens -0.0462847714675263 EYFGAFGEIENIELPMDTK Unmodified 2202.0191 0.019087047 756;3227 A0A087WUK2;A0A024RDB5;O14979;B4DTA2;O14979-2;O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 5 0 1 64.924 64.968 3 2.9278E-07 20168 20230619_1885_Aki_TMTPro18x_K_F5 106.16 91.542 11560 11280 10888 14092 9271.8 10439 15284 12825 8772.3 12954 13323 12254 15478 8534.1 13193 18515 13242 20122 10697 10344 11116 13951 9902.5 10889 14860 12955 9501 13045 13547 12366 15586 9480.3 13491 18511 12717 19070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108510000 8045 756;3227 7612 15293 12284 12284 1 9606 Homo sapiens -0.03384173284166536 EYFGEFGEIEAIELPMDPK Unmodified 2213.0238 0.023838074 4406 Q99729-3;D6R9P3;D6RD18;B4DMY3;D6RBZ0;Q53F64;Q99729-2;Q99729-4;Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 5 0 1 65.106 65.15 3 3.7774E-07 20237 20230619_1885_Aki_TMTPro18x_K_F5 101.74 87.282 10435 6264.6 8407.4 10128 7415.7 9917.6 10571 9829.2 12724 12930 10785 11517 13674 12464 10986 12907 12891 15537 9617.4 5773.4 8708 9901.3 7887.1 10034 10538 10133 12771 12862 11287 11782 13745 12853 11335 13105 12334 14719 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23095000 8046 4406 7613 15294 12285 12285 1 9606 Homo sapiens -0.03415289141366884 EYFGGFGEVESIELPMDNK Oxidation (M) 2175.9671 0.96705148 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;D6RAF8;B4E0W4 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 1 0 4.44 1.5 2 2 2 3 63.046 63.076 3;4 1.503E-20 19625 20230619_1883_Aki_TMTPro18x_K_F4 192.23 183.53 140820 103500 122140 155230 139070 139680 145210 143540 160050 145780 154230 168120 162750 142970 163770 180440 167160 193720 129990 95201 126060 152210 143220 142500 146520 146510 161970 147900 159020 168820 165920 150280 166800 181410 160090 183760 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 776180000 8047 759 7614 15295;15296;15297;15298;15299;15300;15301;15302;15303 12286;12287;12288;12289;12290 12287 462 5 9606 Homo sapiens -0.07389336697906401 EYFGGFGEVESIELPMDNK Unmodified 2159.9721 0.97213685 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;D6RAF8;B4E0W4 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 5 0.816 1 1 1 63.955 63.988 3 1.5721000000000002E-25 19921 20230619_1886_Aki_TMTPro18x_K_F6 216.26 203.03 180990 106390 148360 177080 111920 173730 167270 151310 180330 197030 196710 226920 219750 194030 205620 245230 206990 252010 166810 98098 153120 172830 121100 175200 165860 157470 183690 197580 202300 227830 222910 203900 209650 245870 198340 239120 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1012799999.9999999 8048 759 7614 15304;15305;15306 12291;12292;12293 12293 3 9606 Homo sapiens -0.06145032835274833 EYFSWEGAFQHVGK Unmodified 1683.7682 0.76815616 3510 Q53YD7;P26641;P26641-2;B4DUP0 EEF1G Elongation factor 1-gamma yes no 0 0 0 6 2.92 1 1 2 60.171 60.201 3;4 2.2139E-22 18574 20230619_1880_Aki_TMTPro18x_K_F1 232.37 224.46 316950 273440 309890 307530 263190 327590 279310 298190 465390 359510 324660 320910 322840 308390 348920 393520 349040 378570 293120 250600 314660 308150 278210 329070 286490 308260 457730 359210 339640 327160 331110 322910 354630 393120 334160 359610 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3337199999.9999995 8049 3510 7615 15307;15308;15309;15310 12294;12295;12296 12294 3 9606 Homo sapiens -0.046377196331604864 EYGCGPSGQVVSR Unmodified 1394.6249 0.62486274 4192 Q86VY4 TSPYL5 Testis-specific Y-encoded-like protein 5 yes yes 0 0 0 4.5 0.5 1 1 37.535 37.603 2 1.8993E-07 8572 20230619_1883_Aki_TMTPro18x_K_F4 176.18 147.98 76900 62510 71460 70329 68773 69605 83856 79340 95575 87027 84461 76781 98776 78106 64393 102090 103020 88913 71062 57302 72995 70421 72020 70702 84025 80590 96259 87249 87711 78524 98728 81814 68418 101350 98096 84642 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87912000 8050 4192 7616 15311;15312 12297;12298 12297 2 9606 Homo sapiens -0.056664700158989945 EYGCPCITGKPK Unmodified 1408.6479 0.64790636 2867;2868 E5KND5;Q96RP9;Q96RP9-2;C9IZ01;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 1 1.5 0.5 1 1 43.916 43.916 3 0.00010619 11847 20230619_1880_Aki_TMTPro18x_K_F1 113.99 93.881 80018 60207 80356 85324 78032 98366 117170 108160 105370 116880 121850 107270 135550 92800 95169 149170 122820 125780 73956 55339 81646 84268 82311 98637 115480 110040 108700 117310 124710 108990 135850 99264 99315 147510 117270 119700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138390000 8051 2867;2868 7617 15313;15314 12299;12300 12299 2 9606 Homo sapiens -0.04007167222766839 EYGEQIDPSTHR Unmodified 1430.6426 0.64262129 2984 F8W031;F8VXJ7;Q9Y2B0;F8W1K5 CNPY2 Protein canopy homolog 2 yes no 0 0 0 1.5 0.5 1 1 35.901 35.929 3 1.0452E-09 8017 20230619_1881_Aki_TMTPro18x_K_F2 173.19 119.41 52168 41001 51469 54054 63902 73256 57127 63610 83232 60344 66537 81068 71346 63935 59574 67242 85539 86300 48221 37649 52545 53753 65283 72377 58802 65541 82590 61839 69342 80725 72165 66691 62258 68563 81597 81763 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 217980000 8052 2984 7618 15315;15316 12301;12302 12302 2 9606 Homo sapiens -0.055474314893899646 EYGGLDVLVNNAGIAFK Unmodified 1778.9203 0.9202997 1468 A0A384NL53;P16152;E9PQ63;A8MTM1;P16152-2 CBR1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 1.5 0.5 1 1 63.939 63.943 3 0.00024925 20360 20230619_1881_Aki_TMTPro18x_K_F2 81.713 58.835 18958 18534 22531 22092 20237 25129 22281 22282 26262 24259 22836 28676 26745 26328 23701 32866 24220 28869 17578 16988 22557 22062 21273 25111 22477 23017 26399 24554 23803 28825 27055 27553 24237 32673 23201 27445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39371000 8053 1468 7619 15317;15318 12303 12303 1 9606 Homo sapiens 0.06199636323754021 EYGHTFR Unmodified 908.41407 0.41406533 4345 Q96EY7;B2RDU4;Q96EY7-2 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes no 0 0 0 4.5 0.5 1 1 31.181 31.252 3 0.0063847 6010 20230619_1883_Aki_TMTPro18x_K_F4 95.352 66.93 44356 27383 42681 40471 57486 55135 52401 48404 68109 50693 62309 58604 63534 52692 44560 63597 61971 66024 40939 25204 43697 39978 58366 54491 53594 49977 68205 51400 64197 58976 63909 55131 46714 63811 59153 62670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72314000 8054 4345 7620 15319;15320 12304 12304 1 9606 Homo sapiens -0.04380514484955711 EYGMIYLGK Oxidation (M) 1088.5212 0.52123251 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 1 0 8 0 1 53.051 53.126 3 0.01044 14894 20230619_1888_Aki_TMTPro18x_K_F8 67.563 39.821 102510 88617 103840 120920 109650 108850 113590 115210 123240 127910 141240 120710 140140 120100 128770 150060 138220 140220 94830 81374 105550 119270 113430 111150 114650 117620 125750 128360 143880 122980 142520 125480 131780 149700 132170 133280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66233000 8055 1229 7621 15321 12305 12305 768 1 9606 Homo sapiens -0.01948725385614125 EYGMIYLGK Unmodified 1072.5263 0.52631789 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 0 8 0 1 58.371 58.418 2 0.0015999 17150 20230619_1888_Aki_TMTPro18x_K_F8 114.28 78.77 195230 172660 184060 188260 173740 216700 200480 196470 224070 249550 225750 221360 259580 213740 214000 270920 235500 244220 180530 158180 187800 189280 182230 216520 201360 203510 227230 248490 232970 225770 261640 223780 219920 269680 225180 232210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40608000 8056 1229 7621 15322 12306 12306 1 9606 Homo sapiens -0.007044215229825568 EYHTDTTVK Unmodified 1092.5088 0.50875357 3433;1843 A0A8V8TP20;Q02880-2;Q02880;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;Q59H80;Q6W6M6;P11388;P11388-2;P11388-3;P11388-4 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 0 0 3 0.816 1 1 1 34.868 34.924 3 2.9442E-07 7541 20230619_1882_Aki_TMTPro18x_K_F3 192.26 153.97 132470 53136 164580 168380 221630 258750 173430 215540 195140 142390 231010 249400 173430 171150 238930 68754 207230 202740 122350 49710 165400 161480 224450 253470 178510 221100 198700 151110 233050 245400 182020 173730 239090 78832 198560 191160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 141140000 8057 1843;3433 7622 15323;15324;15325 12307;12308 12307 2 9606 Homo sapiens -0.03380045524295383 EYIDHLK Unmodified 916.46543 0.46543219 458 A8K5G0;A0A024R7K0;M0R2Z9;Q8IX01-4;Q8IX01-3;Q8IX01;M0R3F6;B4DSQ4 SFRS14;SUGP2 SURP and G-patch domain-containing protein 2 yes no 0 0 0 4.5 0.5 1 1 43.739 43.801 3 0.0036619 11189 20230619_1883_Aki_TMTPro18x_K_F4 109.86 20.564 62482 53560 61930 70138 75666 80292 70173 70711 110680 77227 84818 76585 81914 74320 77430 78228 80643 84496 57788 49162 63206 69578 77415 80205 72297 73075 109320 77780 88041 77726 83523 76940 78998 78907 77154 80174 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58267000 8058 458 7623 15326;15327 12309 12309 1 9606 Homo sapiens 0.0038580948909157087 EYIEIITSSIK Unmodified 1294.702 0.70203365 4279 Q8WUW1;Q8WUW1-2 BRK1 Protein BRICK1 yes no 0 0 0 8 0 1 63.305 63.327 3 0.01277 19237 20230619_1888_Aki_TMTPro18x_K_F8 65.842 46.055 55545 41802 52131 56759 41482 54642 54277 49554 68835 73817 77359 70582 70434 67653 70227 74532 77952 86706 51310 38403 53118 56048 44374 55274 54444 51650 69645 73217 78620 71707 72149 70241 71870 75456 74570 82192 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208440000 8059 4279 7624 15328 12310 12310 1 9606 Homo sapiens 0.06647071472093558 EYIIQVAAK Unmodified 1033.5808 0.5807963 968 A0A0A0N0N2;P26992;B3KXJ2 CNTFR Ciliary neurotrophic factor receptor subunit alpha yes no 0 0 0 8 0 1 54.226 54.298 2 3.4406E-05 15421 20230619_1888_Aki_TMTPro18x_K_F8 166.3 121.85 171810 150390 154040 180910 136070 159820 170010 155470 187330 198930 255870 259040 200350 204460 282070 209320 257770 253800 158800 137910 157860 179910 143790 163140 170040 160440 192470 200500 257050 258330 210300 212820 283640 213010 246840 240600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230430000 8060 968 7625 15329 12311 12311 1 9606 Homo sapiens 0.06534913620089355 EYINCNR Unmodified 967.41816 0.41816443 1814 J3QWB6;A0A8V8TLF4;J3KMX2;A0A8V8TLC9;A0A8V8TLV3;B9EGA3;Q92925-3;Q92925-2;Q92925 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 yes no 0 0 0 4 0 1 34.278 34.328 2 0.00011952 7262 20230619_1883_Aki_TMTPro18x_K_F4 135.35 100.54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8061 1814 7626 15330 12312 12312 1 9606 Homo sapiens -0.06684793053545945 EYIPGQPPLSQSSDSSPTR Unmodified 2044.9702 0.97016302 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 5 0 1 48.319 48.396 3 4.62E-08 13031 20230619_1885_Aki_TMTPro18x_K_F5 118.96 108.31 95131 86130 94248 96038 87190 95034 103520 95190 96117 118420 130060 118800 127300 106270 116590 127450 115620 115630 88017 78918 95720 96205 91510 96221 103240 97892 99762 118390 131660 120210 129460 111150 118760 127060 110640 109960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97052000 8062 3402 7627 15331 12313 12313 1 9606 Homo sapiens -0.01052325528894471 EYITPAQISK Unmodified 1148.6077 0.60773933 3335 O94874;O94874-3 UFL1 E3 UFM1-protein ligase 1 yes no 0 0 0 7 0 1 50.473 50.554 3 0.040744 13832 20230619_1887_Aki_TMTPro18x_K_F7 57.39 30.604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8063 3335 7628 15332 12314 12314 1 9606 Homo sapiens 0.03937977440614304 EYKVEILNPPR Unmodified 1356.7402 0.74015049 4282 Q8WVY7 UBLCP1 Ubiquitin-like domain-containing CTD phosphatase 1 yes yes 0 0 1 8 0 1 48.812 48.879 3 0.085433 13043 20230619_1888_Aki_TMTPro18x_K_F8 50.95 30.621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8064 4282 7629 15333 12315 12315 1 9606 Homo sapiens 0.07605002177410825 EYLALQK Unmodified 863.47527 0.4752686 1769 Q4G0J3-3;A0A8I5KUI4;Q4G0J3;A0A8Q3SHG9;A0A8Q3SHN7;H0YA82;A0A8Q3SHF1;A0A8Q3SHH4;A0A8Q3WK75;A0A8I5KSZ3;A0A024RDH5;Q4G0J3-2;D6R9Z6 LARP7;HDCMA18P La-related protein 7 yes no 0 0 0 7 0 1 50.54 50.621 3 0.01721 13869 20230619_1887_Aki_TMTPro18x_K_F7 81.297 20.509 67087 55808 66238 65881 69875 69852 74926 79084 104390 66240 72298 59718 63220 61440 64632 69962 74342 63920 62033 51177 67403 65791 72421 70568 76151 79790 103260 67512 75203 61053 64958 63735 66260 69824 70964 60814 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47659000 8065 1769 7630 15334 12316 12316 1 9606 Homo sapiens 0.038069974944733076 EYLGANWTLEK Unmodified 1322.6507 0.65066678 3671 P57740;P57740-2;B3KMK0;P57740-3;H0YG15 NUP107 Nuclear pore complex protein Nup107 yes no 0 0 0 6 0 1 59.657 59.719 3 0.019132 17963 20230619_1886_Aki_TMTPro18x_K_F6 61.435 29.427 19487 16098 19136 22674 19237 22875 21430 21962 31189 19314 22267 22139 19193 18795 20092 22803 19462 25828 18018 14790 19493 22350 20064 23084 21776 22435 30817 19773 23129 22244 19749 19702 20399 23010 18671 24477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17110000 8066 3671 7631 15335 12317 12317 1 9606 Homo sapiens 0.0022474749805496685 EYLLGSTAEEK Unmodified 1238.603 0.60304789 3253 O43324;D6RBD7;C9J1V9;O43324-2;H0YAL7;D6RCQ0 EEF1E1;EEF1E1-BLOC1S5 Eukaryotic translation elongation factor 1 epsilon-1 yes no 0 0 0 4 0.816 1 1 1 50.938 50.997 2 0.00079373 14554 20230619_1882_Aki_TMTPro18x_K_F3 129.88 4.1406 69136 53635 59274 50973 53457 71018 73417 71877 91016 90301 101550 115760 107150 87886 92208 116300 113840 124170 63832 49106 60920 52027 56664 70313 73410 73842 92124 91035 104020 115400 108460 93084 95357 116770 108790 117810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 226960000 8067 3253 7632 15336;15337;15338 12318 12318 1 9606 Homo sapiens -0.006709514927933924 EYLPIGGLAEFCK Unmodified 1495.7381 0.73810158 415 B3KUZ8;A0A024R6W0;P00505;A8K482;B4DY39 GOT2 Aspartate aminotransferase;Aspartate aminotransferase, mitochondrial yes no 0 0 0 8 0 1 62.962 62.987 3 5.9078E-06 19066 20230619_1888_Aki_TMTPro18x_K_F8 122.46 104.09 155500 137620 148260 157370 144210 148870 155800 164540 370260 182320 155230 150420 175190 175340 172980 186430 160150 194060 143800 126140 151180 157260 150820 151620 162840 167460 355910 182850 170160 155020 178340 180570 175310 187570 153590 184110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 347690000 8068 415 7633 15339 12319 12319 1 9606 Homo sapiens 0.010062053772799118 EYLQTHWEEEECQQDVSLLR Unmodified 2591.1598 0.15983106 4174 Q7Z508;Q9UHY7 ENOPH1 Enolase-phosphatase E1 yes no 0 0 0 2.5 0.5 1 1 56.12 56.148 3 7.4023E-55 17035 20230619_1881_Aki_TMTPro18x_K_F2 273.79 265.4 62379 50175 61109 65738 47565 56108 55656 59222 68054 84873 73977 78355 87610 74490 75495 91647 82222 85146 57664 46066 62001 64984 50745 57536 56079 60977 68973 84176 76243 79685 88407 77874 77443 91414 78625 80930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 92720000 8069 4174 7634 15340;15341 12320;12321;12322 12320 3 9606 Homo sapiens -0.07210246368640583 EYLSEEVQAVHK Unmodified 1430.7042 0.70415892 2722 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;Q53GS9-2;B3KPG7;B3KMG1 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 0 0 0 3.5 0.5 1 1 48.097 48.157 3 1.7639E-05 13110 20230619_1883_Aki_TMTPro18x_K_F4 126.83 103.6 272080 225610 250830 269340 329930 320050 315180 281740 380760 303330 351170 376490 378580 326380 363120 417660 392760 376520 251440 206910 257830 269070 335820 319070 320530 291190 382800 307850 363100 377320 384860 342980 371450 415810 375390 358120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 417070000 8070 2722 7635 15342;15343 12323 12323 1 9606 Homo sapiens 0.006035002098997211 EYLTGFHK Unmodified 993.49198 0.4919813 147 B4DGP7;V9GYY5;B3KQ09;A0A024R1M6;Q9UGY1 MGC3731;NOL12 Nucleolar protein 12 yes no 0 0 0 8 0 1 46.948 46.997 3 0.00089843 12280 20230619_1888_Aki_TMTPro18x_K_F8 120.15 89.591 68992 58142 61694 67409 65836 75513 76869 65552 94199 64592 55868 46066 64620 45906 55559 66898 57642 59470 63751 53305 63386 67423 68414 75521 77337 67661 93389 64851 59439 47656 65201 48522 56834 66435 55144 56557 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25185000 8071 147 7636 15344 12324 12324 1 9606 Homo sapiens -0.005025016195645549 EYNALHQR Unmodified 1029.4992 0.49919194 3273;856 A0A669KB35;Q9UPT6;A0A087WYG2;B7ZMF3;E9PFH7;G1UI24;Q9UPT6-2;Q68CV8;A0A8I5KWZ2;O60271;O60271-4;O60271-2;O60271-3;O60271-5;A0A060L980 MAPK8IP3;DKFZp762N1113;SPAG9 C-Jun-amino-terminal kinase-interacting protein 3;C-Jun-amino-terminal kinase-interacting protein 4 no no 0 0 0 5 0.816 1 1 1 30.428 30.486 3 0.00011742 5724 20230619_1883_Aki_TMTPro18x_K_F4 143.01 106.68 90836 66329 75868 85794 81946 77098 83531 89133 104890 91610 120100 115340 101710 95656 95452 96879 132510 111850 83822 60912 78441 84935 84645 78932 84827 90308 106160 93176 121650 115360 104180 99347 99214 98184 126290 106150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 131780000 8072 856;3273 7637 15345;15346;15347 12325;12326 12325 2 9606 Homo sapiens -0.014377690191395232 EYNALVAQGVR Unmodified 1218.6357 0.63568542 2940 E9PNP3;Q9H7C9;E9PR47;E9PIQ4 AAMDC Mth938 domain-containing protein yes no 0 0 0 6.5 0.5 1 1 46.866 46.952 2 1.9795E-08 12160 20230619_1887_Aki_TMTPro18x_K_F7 172.88 150.26 143050 123060 128030 133460 159200 181170 147550 153610 174000 113240 139450 131160 131230 117630 143690 146590 169300 144590 132200 112750 131810 134580 162700 178960 150270 157730 174180 117290 144330 132030 134890 123270 147310 146730 161570 137440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 191700000 8073 2940 7638 15348;15349 12327;12328 12328 2 9606 Homo sapiens 0.035113004207232734 EYNEDEDPAAR Unmodified 1307.5266 0.52658848 2227 Q9H4P6;E7EQZ7;Q9UK43;Q95HA6;B2R5Y4;Q13123;Q9Y3Z5;D6REL4;D6RCQ4;D6RAY9 IK;CSA2;DKFZp564B112 Protein Red yes no 0 0 0 1 0 1 35.255 35.255 2 5.9649E-09 8082 20230619_1880_Aki_TMTPro18x_K_F1 218.6 196.52 87708 59174 89178 108590 119840 139090 117480 114940 154150 124340 153570 151520 151580 131220 122780 106350 186540 155000 81024 54600 91068 105860 122100 137670 119680 119360 154810 126080 157440 151830 153470 134770 128760 110070 177650 146820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113380000 8074 2227 7639 15350 12329;12330 12329 2 9606 Homo sapiens -0.11487375060096383 EYNEFAEVFLK Unmodified 1387.666 0.66598249 3354 O95373 IPO7 Importin-7 yes yes 0 0 0 6 0 1 63.459 63.508 3 0.0017832 19697 20230619_1886_Aki_TMTPro18x_K_F6 83.226 65.9 294190 203900 257800 270980 214040 261210 260830 271600 300500 347840 328420 334930 351910 333500 296740 402120 348550 425670 271490 187340 264340 268030 227380 265040 261660 278780 305270 347000 336670 340590 356060 347610 306200 403970 333520 403770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 397050000 8075 3354 7640 15351 12331 12331 1 9606 Homo sapiens -0.012343857047653728 EYNLEQQRR Unmodified 1234.6054 0.60544792 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;H0Y659;Q5H935;A0A087X146 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 1 4 0 1 32.118 32.179 3 0.01377 6400 20230619_1883_Aki_TMTPro18x_K_F4 68.557 50.693 37375 39296 44915 36767 58328 49653 47975 46980 58226 52217 50877 46547 54538 41655 47671 54068 59629 45354 34679 35936 45131 37557 59122 49239 49291 48300 58464 52335 52672 47365 55204 43800 49285 53632 56839 43222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14837000 8076 594 7641 15352 12332 12332 1 9606 Homo sapiens -0.0024705824448574276 EYNLNFSGSSTIQEVK Unmodified 1814.8687 0.86865806 2145 A8K9X5;Q9UNN5;B3KT28 FAF1 FAS-associated factor 1 yes no 0 0 0 7 0 1 56.936 56.992 3 9.802E-06 16583 20230619_1887_Aki_TMTPro18x_K_F7 103.39 87.25 36175 27795 26941 36753 17304 27836 39109 29714 40134 36970 37160 20741 37467 29769 36634 51481 37091 39378 33367 25525 28071 36249 19404 28845 38167 30458 40678 36505 38176 22207 38179 31569 37378 50654 35500 37521 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197850000 8077 2145 7642 15353 12333 12333 1 9606 Homo sapiens -0.006181521608141338 EYNVYQHDEL Unmodified 1308.5622 0.5622457 4754 Q9Y680-3;Q9Y680 FKBP7 Peptidyl-prolyl cis-trans isomerase FKBP7 yes no 0 0 0 1.5 0.5 1 1 46.757 46.797 2 0.0010756 13045 20230619_1880_Aki_TMTPro18x_K_F1 112.8 103.94 52592 42209 44098 48061 45003 52299 54693 62871 60632 73649 83924 98732 71160 77224 75177 90311 96118 104900 48560 38698 45548 48137 46976 52807 54804 63760 62381 74559 84561 98321 73354 80983 77619 91314 91824 99451 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 327810000 8078 4754 7643 15354;15355 12334 12334 1 9606 Homo sapiens -0.07969292812435924 EYPDFNFVGR Unmodified 1242.5669 0.56693715 4388 Q96PU8-5;Q96PU8-9;Q96PU8-8;Q96PU8-6;Q96PU8-3;Q96PU8;F5GXS8;F5GYM3;F5H5U6;F5H8C8 QKI Protein quaking yes no 0 0 0 5.67 0.471 1 2 57.112 57.18 2 0.00021791 16893 20230619_1886_Aki_TMTPro18x_K_F6 159.58 136.96 165820 143130 167270 157770 184920 224460 189810 189640 242940 213280 195750 185690 215380 169250 186750 213760 189760 186650 153400 131150 170030 159060 191050 221100 192720 196680 242620 213550 203830 189240 217750 177530 190720 212520 181510 177580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 243240000 8079 4388 7644 15356;15357;15358 12335;12336 12336 2 9606 Homo sapiens -0.04464363879014854 EYQAGDFEAAER Unmodified 1384.5895 0.58952309 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;C9JZL3;Q9H5T3;B4DTL6;A0A8V8TNT2;A0A8V8TQJ1 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 0 1 0 1 43.716 43.716 2 2.6722E-18 11732 20230619_1880_Aki_TMTPro18x_K_F1 240.8 213.67 92202 71105 81031 84269 79929 99642 88975 83538 103900 120220 124890 121800 119850 98815 101800 149610 144850 139660 85140 65226 83258 84225 83490 99212 89668 87444 105900 119560 126880 122850 121640 105370 106480 148810 138140 132770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97264000 8080 1842 7645 15359 12337 12337 1 9606 Homo sapiens -0.08738809272063008 EYQDAFLFNELK Unmodified 1515.7246 0.72456001 4699 Q9Y230;B3KNL2;Q9Y230-2 RUVBL2 RuvB-like 2 yes no 0 0 0 4.5 0.5 1 1 62.882 62.909 3 1.2088E-05 19263 20230619_1885_Aki_TMTPro18x_K_F5 132.99 114.57 58012 46970 57659 68509 72835 75846 74482 88593 102440 90008 80735 96367 102010 93052 70949 120580 100100 124230 53636 43174 58897 67494 74506 76412 75866 89604 101930 91099 84852 97438 102040 97529 74586 120770 95664 117870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 419120000 8081 4699 7646 15360;15361 12338 12338 1 9606 Homo sapiens -0.012673291302917278 EYQDLLNVK Unmodified 1120.5764 0.57643921 3414;1958;3949;3438;2388 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5;Q45VM7;P17661;L7RDA5;Q45VM8;Q45VM6;A5Z217;A0A384NPX1;Q53SB5;Q9H319;Q5RLN2;Q16352;Q59EM6;B4DE66;E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7;P07197-2;P12036-2;P12036;B3KQI5;P07196;B3KXJ0;Q8TCR7;B4DR43 VIM;HEL113;DES;tmp_locus_29;INA;NEFM;NEFH;NEFL;DKFZp761K0922 Vimentin;Desmin;Alpha-internexin;Neurofilament medium polypeptide;Neurofilament heavy polypeptide;Neurofilament light polypeptide no no 0 0 0 5.5 1.12 2 2 2 2 56.467 56.517 2;3 4.0476E-07 16635 20230619_1886_Aki_TMTPro18x_K_F6 191.45 175.1 2385600 1882600 2000900 1722700 3193200 3762600 2789900 2750100 3421600 3391800 3514400 3560900 3830800 3060400 3425400 3826100 3557000 3585900 2202500 1723000 2081400 1780800 3215500 3627000 2854900 2894000 3455300 3399800 3615400 3590500 3878900 3214300 3499800 3818200 3402200 3408400 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 21354000000 8082 3414;3949;1958;3438;2388 7647 15362;15363;15364;15365;15366;15367;15368;15369 12339;12340;12341;12342;12343 12342 5 9606 Homo sapiens 0.020974044065042108 EYQEIENLDK Unmodified 1279.5932 0.59321148 3182 L0R819 ASNSD1 yes yes 0 0 0 2 0 1 51.625 51.67 3 0.00026294 15179 20230619_1881_Aki_TMTPro18x_K_F2 115.04 84.599 49442 41188 50285 55777 52529 52498 56066 51738 62178 61053 68347 68454 65590 57640 75969 69174 67185 72148 45729 37824 51071 55074 54433 53329 56518 53190 63238 61429 69744 68797 67521 60415 76548 69521 64401 68477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64213000 8083 3182 7648 15370 12344 12344 1 9606 Homo sapiens -0.03540139498181816 EYQELLNVK Unmodified 1134.5921 0.59208927 2433 B3KWQ6;P41219;P41219-2;H7C5W5 PRPH Peripherin yes no 0 0 0 5.71 1.03 1 2 2 2 56.318 56.375 2;3 6.4767E-09 16385 20230619_1885_Aki_TMTPro18x_K_F5 209.6 138.68 866270 591420 689020 772440 553000 667600 667600 636650 884440 875100 1071900 1197000 1182500 973640 1140800 1039800 1222600 1352200 798830 543340 713080 763730 589570 682250 673530 659550 895950 881490 1096700 1192500 1201000 1015600 1164800 1061600 1169900 1280600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 8095999999.999999 8084 2433 7649 15371;15372;15373;15374;15375;15376;15377 12345;12346;12347 12345 3 9606 Homo sapiens 0.030176909235706262 EYQEYLK Unmodified 971.46001 0.46001246 4432 Q9BTL3;A0A3B3IU46 FAM103A1 RNMT-activating mini protein yes no 0 0 0 4 0 1 49.249 49.287 2 0.0097818 13644 20230619_1883_Aki_TMTPro18x_K_F4 105.57 59.85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8085 4432 7650 15378 12348 12348 1 9606 Homo sapiens -0.026859140933879644 EYQLNDSAK Unmodified 1066.4931 0.49310351 1253 A0A142CHG9;P09471-2;P09471;Q8N6I9;H3BTM2;A0A1W2PP87 GNAO1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 3.5 0.5 1 1 42.537 42.592 2 0.0026527 10648 20230619_1883_Aki_TMTPro18x_K_F4 117.31 62.7 85750 52467 91238 92900 100180 111690 93079 96190 112930 104890 152570 175870 134210 136800 137920 81381 172990 169430 79208 48409 92364 90672 103180 111090 94942 99604 115400 107710 154040 173780 137890 139460 141780 87805 165150 160000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126700000 8086 1253 7651 15379;15380 12349 12349 1 9606 Homo sapiens -0.03748332041345748 EYQLNDSASYYLNDLDR Unmodified 2077.9229 0.92287848 3415 P08754 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 0 0 0 3 0 1 60.862 60.891 3 2.5065E-38 18784 20230619_1882_Aki_TMTPro18x_K_F3 252.87 222.74 27423 21088 26744 31573 20941 27659 27665 28839 27793 31141 33364 33405 35157 26792 28402 36674 31884 37753 25343 19394 27171 30957 22422 28271 27527 29451 28539 31402 34042 33596 35480 28393 29240 36728 30513 35825 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25625000 8087 3415 7652 15381 12350 12350 1 9606 Homo sapiens -0.0729660479987615 EYQLSDSAK Unmodified 1039.4822 0.48220447 3525 Q59FM5;P29992;O95837;Q99061 GNA11;GNA14;GNAI2 Guanine nucleotide-binding protein subunit alpha-11;Guanine nucleotide-binding protein subunit alpha-14 yes no 0 0 0 3 0 1 43.263 43.332 2 5.1324E-07 11056 20230619_1882_Aki_TMTPro18x_K_F3 150.61 97.442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8088 3525 7653 15382 12351 12351 1 9606 Homo sapiens -0.03595734415625884 EYQMELK Unmodified 939.43717 0.43716853 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7;Q32P42;A8K3I2;E7EN38;A0A494C122;E7ESD9;A0A494BZX5;A0A494C0Y7 RAD50 DNA repair protein RAD50 yes no 0 0 0 4 0 1 48.653 48.691 2 0.011598 13368 20230619_1883_Aki_TMTPro18x_K_F4 103.56 46.068 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8089 4309 7654 15383 12352 12352 1 9606 Homo sapiens -0.03497256482501143 EYQNEEDSLGGSR Unmodified 1482.6223 0.62227978 4033 Q5HYK3;F8VVX6;F8VP53;F8VVW7 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes no 0 0 0 1 0 1 38.765 38.765 2 1.0045999999999998E-21 9540 20230619_1880_Aki_TMTPro18x_K_F1 240.8 235.9 43013 30801 43283 43323 65530 58142 54356 64583 81597 63411 71265 65305 71889 59281 56226 83865 79965 74763 39744 28314 44264 42921 65943 57835 56296 65439 81127 64237 73557 66085 72626 62642 58913 83284 76244 71126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90283000 8090 4033 7655 15384 12353 12353 1 9606 Homo sapiens -0.0997264693987745 EYQPHVIVSTTGPNPFTTLTDR Unmodified 2472.2285 0.22850297 1741 P35611-3;E7EV99;P35611;P35611-4;P35611-6;P35611-2;A0A804HL01;E7ENY0;H0Y9H2;Q4TT76;Q16155 ADD1;LA04NC01-25A3.2-001;ADDA Alpha-adducin yes no 0 0 0 8 0 1 57.374 57.426 3 9.6235E-24 16758 20230619_1888_Aki_TMTPro18x_K_F8 187.86 178.77 18613 12292 18330 21526 12004 20808 15699 12157 18788 17723 19837 24130 21487 18795 20656 21870 22546 27196 17188 11335 18574 20943 13134 20867 15715 13197 19001 17821 20407 24009 21843 19727 21131 22221 21586 25757 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43192000 8091 1741 7656 15385 12354 12354 1 9606 Homo sapiens 0.05127785993317957 EYQTQLIQR Unmodified 1177.6091 0.60913632 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5.5 0.5 1 1 42.227 42.316 2 0.00019398 10465 20230619_1885_Aki_TMTPro18x_K_F5 144.5 110.24 248870 207580 229160 242070 238210 274430 274630 278860 316990 296620 343620 319410 342390 288870 315460 358560 366240 340680 230000 190330 234680 242120 247860 275150 276140 285020 321470 299550 351070 322420 348220 302640 324290 358090 349750 323860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 773430000 8092 3881 7657 15386;15387 12355;12356 12355 2 9606 Homo sapiens 0.027436115293767216 EYRPETGSWVFK Unmodified 1497.7252 0.72522871 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPW9;A0A8V8TPX4;A0A8V8TRC7;A0A3B3ITD8;A0A024RCC4;H0YDA1;A0A8V8TRD0;A8KA17;A0A8V8TQG5;P52948-3;P52948-4;B4DWF8;A0A8V8TR23 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 1 1 0 1 51.833 51.833 3 9.4564E-05 15118 20230619_1880_Aki_TMTPro18x_K_F1 115.12 75.854 137950 126170 138500 141340 128030 157850 146560 147820 199520 185720 161630 156940 186550 155740 164330 182520 171840 178030 127660 115600 140530 141760 134530 158140 148340 152690 198810 184870 168650 160570 188550 162150 168010 182690 164390 169110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68564000 8093 1852 7658 15388 12357 12357 1 9606 Homo sapiens -0.003724896905850983 EYRPYETER Unmodified 1241.5677 0.56766543 4043 Q5JVS0-2;Q5JVS0 HABP4 Intracellular hyaluronan-binding protein 4 yes no 0 0 1 2.5 0.5 1 1 32.627 32.692 3 0.0047271 6755 20230619_1881_Aki_TMTPro18x_K_F2 80.916 51.149 40138 29481 40998 49189 50601 57158 50432 56859 61741 57926 73967 74742 66004 56503 58788 56235 84574 73254 37097 27155 41775 48121 51817 57150 51229 58121 62708 58987 74956 74475 67296 58884 61307 57482 80592 69438 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37869000 8094 4043 7659 15389;15390 12358 12358 1 9606 Homo sapiens -0.04345569229985813 EYSIGTGSTK Unmodified 1041.4979 0.49785453 1711 A0A7P0TAL9;A0A7P0TBA9;B7ZKK7;P19525-2;P19525;Q8IW76;A0A7P0Z4M0;Q05CP4;Q6PK38 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes no 0 0 0 6 0 1 42.742 42.836 2 2.3164E-09 10703 20230619_1886_Aki_TMTPro18x_K_F6 209.6 142.61 107090 59904 101930 125770 137790 136850 123010 131260 158930 127250 148980 144990 154270 133070 122770 106540 174410 155370 98791 55443 104640 121590 139830 137340 126000 134370 159390 129430 153480 145920 155840 136330 128130 110300 166240 147130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65609000 8095 1711 7660 15391 12359 12359 1 9606 Homo sapiens -0.021234478985661553 EYSLQVLK Unmodified 978.5386 0.53859714 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4;H0YIZ0;G3V2Y4 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 7.5 0.5 1 1 54.207 54.275 2 0.00019257 15452 20230619_1887_Aki_TMTPro18x_K_F7 169.57 57.198 296850 237800 271120 267580 301690 334810 368170 345470 390590 336410 334070 327890 340850 280910 370250 358890 360110 385380 274260 218000 278070 268800 312760 333730 367900 351910 394250 340280 345820 331750 349020 295560 375370 360910 344820 365660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 600360000 8096 657 7661 15392;15393 12360;12361 12360 2 9606 Homo sapiens 0.048469382116991255 EYSVEAEER Unmodified 1110.4829 0.48293275 1610 A0A6M8YHF9;A0A6M8YDW2;A0A6M8YDW1;Q8IUF8-4;Q8IUF8;Q8IUF8-2;H0Y9L8 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA yes no 0 0 0 1 0 1 37.1 37.1 2 1.0193E-11 8819 20230619_1880_Aki_TMTPro18x_K_F1 219.51 173.08 174420 124270 143160 130370 161930 173030 198150 200590 279410 247460 227950 237350 304520 233220 210730 297300 307040 286380 160910 113900 148260 131870 167850 172430 200090 204130 278020 247370 239590 241320 303860 244230 221710 296850 292700 272190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185500000 8097 1610 7662 15394 12362 12362 1 9606 Homo sapiens -0.0678893976657946 EYTAAVEAK Unmodified 980.48148 0.48147619 4405 Q99623;F5GY37;Q99623-2;J3KPX7;F5GWA7;B4DW05;A0A976LZI3;A0A7I2V5F0;F5H3X6;U3KPZ5 PHB2 Prohibitin-2 yes no 0 0 0 3.5 0.5 1 1 43.877 43.934 2 3.5233E-05 11230 20230619_1883_Aki_TMTPro18x_K_F4 166.16 108.88 244160 120740 258290 295430 370280 390290 340980 378310 410340 301250 416210 438500 422490 377010 373230 234060 439500 431530 225320 112140 263120 284840 374860 386830 347670 385130 413880 312930 427140 436540 428770 383510 383230 249090 419820 407810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 441960000 8098 4405 7663 15395;15396 12363 12363 1 9606 Homo sapiens -0.009545290646656213 EYTACELMNIYK Unmodified 1533.6844 0.68435145 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 7 0 1 61.344 61.383 3 6.9869E-10 18375 20230619_1887_Aki_TMTPro18x_K_F7 180.19 158.32 263410 244830 266720 302060 240700 284350 296320 306200 336420 319220 276120 256510 310930 255920 314560 385810 322150 353420 243800 224530 270530 300130 253720 289350 296830 311640 338160 320030 287620 263500 316410 270950 320640 383540 308380 335910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276910000 8099 4414 7664 15397 12364 12364 1 9606 Homo sapiens -0.061143351167402216 EYTDLEVSHK Unmodified 1219.5721 0.57208211 4571 Q9NQC3;Q9NQC3-4;Q3LIF4;Q9NQC3-6;Q53RF4 RTN4;Nbla00271 Reticulon-4;Reticulon yes no 0 0 0 3 0 1 42.989 43.055 3 0.002404 10951 20230619_1882_Aki_TMTPro18x_K_F3 82.171 56.047 36099 28166 35374 34660 36898 42344 36587 33281 47561 39579 47314 47752 46796 38819 44159 45746 51256 56516 33365 25846 36012 34569 38230 42027 37248 34810 47789 39938 48533 47807 47651 40722 45352 46454 49009 53546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52835000 8100 4571 7665 15398 12365 12365 1 9606 Homo sapiens -0.0289210480705151 EYTDVYPEIIER Unmodified 1525.73 0.73003931 599 Q9UNF1;A0A024R9Y7;Q5H907;Q5H909;Q9UNF1-2;B4DX55;B4DWM5;Q9Y5V3;A0A024R254;Q9Y5V3-2 MAGED2;MAGED1 Melanoma-associated antigen D2;Melanoma-associated antigen D1 yes no 0 0 0 2.5 0.5 1 1 56.018 56.045 2 2.6949E-05 17004 20230619_1881_Aki_TMTPro18x_K_F2 166.69 141.9 139470 116930 114310 142000 113420 137360 123360 128620 147260 153230 165680 159260 164150 147890 169620 177680 183030 192730 128800 107250 118370 141260 118350 139040 124600 132690 149430 153730 169040 161080 167910 154490 173170 178890 175060 182860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 164870000 8101 599 7666 15399;15400 12366;12367;12368 12366 3 9606 Homo sapiens -0.011796503384857715 EYTEEIER Unmodified 1067.4771 0.47711909 1656 A0A7I2V3A9;B2RAM6;P52732;A0A7I2V3V3;A0A7I2YQY4 KIF11 Kinesin-like protein;Kinesin-like protein KIF11 yes no 0 0 0 1 0 1 39.725 39.725 2 0.0076448 9951 20230619_1880_Aki_TMTPro18x_K_F1 107.01 83.035 111740 93216 109180 118080 110320 127140 112420 119320 172300 145240 142180 125640 151010 116200 114130 163680 141530 115970 103320 85541 111190 117320 114720 127690 115090 123100 170900 144890 147500 128220 152050 122690 118490 160910 134970 110750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 50787000 8102 1656 7667 15401 12369;12370 12370 2 9606 Homo sapiens -0.053920382782280285 EYTINIHK Unmodified 1016.5291 0.52909508 2204 B2R4C1;P62899;H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899-2;B8ZZK4 RPL31 60S ribosomal protein L31 yes no 0 0 0 7 0.816 1 1 1 44.704 44.771 3 0.00022514 11367 20230619_1888_Aki_TMTPro18x_K_F8 151.97 93.258 2570000 2111700 2313800 2457300 2617500 2961300 2907500 2934100 3376000 3136000 3222000 3032100 3450900 2835200 2568600 3633100 3455900 3183400 2374500 1936300 2377500 2460400 2704200 2955600 2929000 3004000 3406500 3155900 3320600 3078000 3473000 2973200 2682200 3609900 3296100 3029300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4471500000 8103 2204 7668 15402;15403;15404 12371;12372 12372 2 9606 Homo sapiens 0.021491699261900976 EYTPFPPPQPESQIDK Unmodified 1871.8941 0.89414453 3863 Q13601 KRR1 KRR1 small subunit processome component homolog yes yes 0 0 0 4.5 0.5 1 1 55.5 55.538 3 1.1409E-05 16475 20230619_1883_Aki_TMTPro18x_K_F4 100.43 87.226 46771 39309 48180 49594 40355 43419 47513 43101 54601 55707 44659 50885 50144 47533 51202 54103 53305 52602 43266 36069 48712 49164 42720 44378 47714 44419 54869 55483 46586 51721 51096 49472 52178 54177 50977 49980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84832000 8104 3863 7669 15405;15406 12373 12373 1 9606 Homo sapiens -0.006926776384034383 EYTQATIYVHK Unmodified 1351.6772 0.67721588 2708 B7ZKS3;Q86UV5;Q86UV5-8;B7ZKR8;Q86UV5-2;A0A0A0MRS6;Q86UV5-5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes no 0 0 0 7.5 0.5 1 1 45.541 45.601 3 0.00018524 11743 20230619_1888_Aki_TMTPro18x_K_F8 112.51 89.786 62608 51227 58855 70934 60651 74182 76483 66709 85460 85593 99772 98033 98746 83638 86784 94942 100630 104110 57863 47057 60220 70020 63347 74566 76454 69218 87099 85881 101630 98474 100240 87357 89268 95720 96170 98772 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127800000 8105 2708 7670 15407;15408 12374 12374 1 9606 Homo sapiens 0.015444363893720947 EYTTICR Unmodified 941.42767 0.42766648 3310 O75569-3;O75569-2;O75569;A0A7I2YQ87;A0A7I2V5H3;B4DJC7;A0A7I2V2I8;A0A7I2V3J2 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes no 0 0 0 4.5 0.5 1 1 37.346 37.414 2 0.0061091 8462 20230619_1885_Aki_TMTPro18x_K_F5 146.87 109.49 53229 41522 52137 55069 63964 60506 64758 65449 77614 57132 70405 60126 61243 51097 67263 42786 61777 53084 49197 38131 53241 54575 65460 60900 65636 66293 77964 58305 72117 60604 63063 52588 67848 43798 59100 50343 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108290000 8106 3310 7671 15409;15410 12375 12375 1 9606 Homo sapiens -0.04539024768018862 EYVAAQLR Unmodified 948.50288 0.50288033 3876 Q14151;A0PJ47;K7EQU4;K7ERX3;B4DU53 SAFB2 Scaffold attachment factor B2 yes no 0 0 0 6 0 1 42.396 42.491 2 0.012723 10546 20230619_1886_Aki_TMTPro18x_K_F6 89.296 27.735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8107 3876 7672 15411 12376 12376 1 9606 Homo sapiens 0.02656900754709568 EYVAYSHTGR Unmodified 1181.5465 0.54653606 2641 B4E0N6;Q969X5-2;Q969X5 ERGIC1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes no 0 0 0 5.5 1.12 1 1 1 1 33.334 33.401 3 8.0363E-10 6932 20230619_1885_Aki_TMTPro18x_K_F5 194.94 176.16 83099 59397 77475 78671 104150 103440 94744 92975 128400 92368 107180 101820 90200 82812 92107 91493 114150 103340 76736 54565 79565 78180 105800 102490 97079 95678 127920 93751 110180 102300 92766 86494 94835 92475 108930 98064 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 121360000 8108 2641 7673 15412;15413;15414;15415 12377;12378 12377 2 9606 Homo sapiens -0.036975345388327696 EYVDLER Unmodified 922.43961 0.43961137 417;2099 A0A024R6X2;Q13951;A0A494C0A9;A8K719;Q13951-2;A0A024R6W3 CBFB Core-binding factor subunit beta no no 0 0 0 1.5 0.5 1 1 43.483 43.524 2 0.0072992 11651 20230619_1880_Aki_TMTPro18x_K_F1 126.28 54.563 400740 286010 314330 343620 493200 612900 460350 502220 854780 537460 556990 521930 554450 438810 457990 620550 647350 542730 369590 262480 329500 345710 498850 596530 477770 521150 835610 541670 584820 528080 561530 465040 478720 615820 616820 516700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 440890000 8109 417;2099 7674 15416;15417 12379;12380 12379 2 9606 Homo sapiens -0.024710847531878244 EYVDPNNIFGNR Unmodified 1436.6684 0.66844211 3203 O00116;B7Z3Q4;B8ZZ81;Q53S12 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes no 0 0 0 5.5 0.5 1 1 55.664 55.734 2 5.4415E-05 16158 20230619_1885_Aki_TMTPro18x_K_F5 155.06 131.38 49522 43323 49044 52162 47547 62595 48427 51069 73900 59815 60536 59617 59527 48867 66475 67660 68494 70117 45808 39728 49863 52082 49662 62219 49572 53195 73273 60019 62700 60182 61117 51772 67593 67820 65527 66565 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44161000 8110 3203 7675 15418;15419 12381 12381 1 9606 Homo sapiens -0.032425372471152514 EYVEHTVK Unmodified 1003.4975 0.4974606 3321 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 0 3.5 0.5 1 1 37.171 37.22 3 0.00045359 8457 20230619_1882_Aki_TMTPro18x_K_F3 126.24 78.305 377840 245770 403720 402990 552620 564940 464870 495140 730880 470880 579830 529690 525520 458140 472160 358030 614590 508870 349130 226460 410130 395930 559970 557220 481910 509790 722560 479620 599100 532490 535790 469830 488210 370310 585930 482120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 525480000 8111 3321 7676 15420;15421 12382;12383 12382 2 9606 Homo sapiens -0.004148228277585986 EYVESQLQR Unmodified 1150.5619 0.56185177 4089 Q86UY0;Q6EHZ3;Q658S9;Q8NBS9;A0A024QZV0;Q8NBS9-2 TXNDC5;STRF8;DKFZp666I134;hCG_1811539 Thioredoxin domain-containing protein 5 yes no 0 0 0 3.5 0.5 1 1 41.853 41.906 2 8.6422E-06 10402 20230619_1882_Aki_TMTPro18x_K_F3 176.44 121.9 396940 310960 316910 352230 410330 439350 443990 459590 632030 489480 583480 599440 555030 487290 505340 599120 597480 608450 366330 285110 330240 353580 420140 438210 451330 468770 630660 496680 599680 599880 565220 512100 520360 600520 570850 577770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 528840000 8112 4089 7677 15422;15423 12384;12385 12384 2 9606 Homo sapiens -0.0074066774163839 EYVGIVR Unmodified 834.45995 0.45995289 1807 O60832;A0A8Q3WLC8;A0A8Q3SIY6;A0A8Q3SIS9;A0A8Q3SJE8;A0A8Q3WLD1;A0A8Q3SIX2;C9IYT0;O60832-2;A0A8Q3WLE4;U5UA77;A0A8Q3WLW8 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 0 0 0 5.5 0.5 1 1 43.314 43.402 2 0.013526 10943 20230619_1886_Aki_TMTPro18x_K_F6 113.85 82.787 272800 217970 230790 271440 276990 303120 284310 287970 402600 323090 342580 352740 355020 300380 313110 366930 369540 378720 251890 200020 238880 270100 284550 303780 289810 296180 400840 325740 354860 354990 360020 315110 322540 368170 353090 359550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 312980000 8113 1807 7678 15424;15425 12386;12387 12387 2 9606 Homo sapiens 0.03610130697279601 EYVTCHTCR Unmodified 1224.5016 0.50157648 2657 Q6IBR8;B5BU01;P20042;Q96I16 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 4.5 1.12 1 1 1 1 29.57 29.64 3 1.638E-12 5553 20230619_1885_Aki_TMTPro18x_K_F5 229.61 207.76 45193 32612 41586 43728 60810 62062 47957 55767 75749 36174 43994 39327 45694 34469 47418 31245 47837 38153 41730 29962 42836 43476 61324 61217 49944 56846 74208 37788 46676 39637 46647 35577 48113 31896 45699 36201 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 382240000 8114 2657 7679 15426;15427;15428;15429 12388;12389;12390 12389 3 9606 Homo sapiens -0.10169424667992644 EYWMDPEGEMK 2 Oxidation (M) 1445.5479 0.54791755 3649 Q6IBA2;Q59G24;P53999;B7Z1Z0 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes no 0 2 0 1.5 0.5 1 1 49.104 49.169 3 0.014315 14029 20230619_1880_Aki_TMTPro18x_K_F1 67.08 60.663 37306 34237 40801 45067 52699 67976 49515 55209 73972 61035 69677 72657 88206 73390 58516 90295 83146 93819 34549 31420 41377 44899 53826 66667 50865 57405 73779 61782 72476 73309 88038 76582 61563 90562 79390 89034 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59664000 8115 3649 7680 15430;15431 12391;12392 12391 2340;2341 2 9606 Homo sapiens -0.157034493472338 EYWMDPEGEMK Unmodified 1413.5581 0.5580883 3649 Q6IBA2;Q59G24;P53999;B7Z1Z0 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes no 0 0 0 2.5 0.5 1 1 58.348 58.37 3 0.0021173 17946 20230619_1881_Aki_TMTPro18x_K_F2 68.44 46.568 124430 100260 132810 136210 112350 153690 152160 151180 165070 169430 142550 150530 181990 152970 139790 215510 190780 223770 115110 92082 133990 134820 119590 153920 151520 155080 166660 169690 149080 153830 182540 161090 146140 215750 182270 212330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44201000 8116 3649 7680 15432;15433 12393 12393 1 9606 Homo sapiens -0.13214841622016138 EYWMDPEGEMKPGR Oxidation (M) 1739.7283 0.72834153 3649 Q6IBA2;Q59G24;P53999;B7Z1Z0 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes no 0 1 1 4 0.816 1 1 1 48.567 48.631 3 0.0014717 13327 20230619_1883_Aki_TMTPro18x_K_F4 83.358 74.535 189440 174810 208280 218510 225430 239120 237920 216490 263470 273280 249860 242680 274110 196190 256990 212290 236550 205120 175450 160330 210340 217340 233000 239760 239930 224300 266610 272200 258040 245990 277860 204960 260230 212860 226310 195010 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 183380000 8117 3649 7681 15434;15435;15436 12394;12395;12396 12395 2340;2341 3 9606 Homo sapiens -0.11193350690427906 EYWMDPEGEMKPGR Unmodified 1723.7334 0.73342691 3649 Q6IBA2;Q59G24;P53999;B7Z1Z0 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes no 0 0 1 4 0.816 1 1 1 52.69 52.742 3 1.1125E-06 15237 20230619_1883_Aki_TMTPro18x_K_F4 128.95 111.46 254340 171180 219630 257620 174490 263400 250780 257530 293110 293480 242220 256880 292960 221260 289550 231090 225890 190000 234660 157530 225650 253000 187560 265480 249750 264450 294320 293550 253310 260970 296950 230030 290630 230040 216490 181030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222990000 8118 3649 7681 15437;15438;15439 12397 12397 1 9606 Homo sapiens -0.09949046827796337 EYWNDPELDEGER Unmodified 1650.6798 0.67979466 2595 B4DUT2;A0A024R7C4;A0A494C108;Q8N9T8;B7ZLF4;B4DUY9;H0YFD2;F8WFC1 FLJ12949;KRI1 Protein KRI1 homolog yes no 0 0 0 1 0 1 51.594 51.594 2 1.405E-05 15038 20230619_1880_Aki_TMTPro18x_K_F1 153.95 131.26 17111 14861 15141 15665 15112 18016 14050 16157 16259 21033 18458 16780 22924 17630 19595 19524 21992 20752 15813 13612 15545 15792 15690 18001 14311 16755 16561 20861 19018 17256 23083 18276 20114 19660 21010 19702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30059000 8119 2595 7682 15440 12398 12398 1 9606 Homo sapiens -0.11951804734280813 EYYDHLPELK Unmodified 1305.6241 0.62411768 3432 Q59GM9;P11216;B4DSD8;H0Y4Z6;Q8TDG6 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 4 0 1 51.526 51.554 3 0.048447 14690 20230619_1883_Aki_TMTPro18x_K_F4 56.094 32.859 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8120 3432 7683 15441 12399 12399 1 9606 Homo sapiens -0.01646941393300949 EYYLLHLQR Unmodified 1233.6506 0.6506072 3751 P78318;A0A1W2PR95 IGBP1 Immunoglobulin-binding protein 1 yes no 0 0 0 1 0 1 49.298 49.298 3 0.00010767 14088 20230619_1880_Aki_TMTPro18x_K_F1 137.84 75.001 18068 14878 17946 17404 15694 22188 24803 21385 30790 16189 14549 15787 16405 14514 17767 16265 17294 15468 16707 13643 18217 17437 16768 22041 24638 21769 30329 16660 15789 16001 16761 15103 18007 16280 16539 14707 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25546000 8121 3751 7684 15442 12400 12400 1 9606 Homo sapiens 0.043127922887151726 EYYTQNMER Oxidation (M) 1248.5081 0.50810164 4611 Q9NW64-2;Q9NW64;E5RJW4;E5RHA8 RBM22 Pre-mRNA-splicing factor RBM22 yes no 0 1 0 2 0 1 34.284 34.34 2 0.012151 7388 20230619_1881_Aki_TMTPro18x_K_F2 74.376 60.785 31530 22442 20264 30081 43117 41093 37737 39881 51699 42016 46158 38730 42029 32606 37766 42402 46064 41913 29045 20620 21923 29874 42835 40698 38761 40857 51630 42268 47376 39290 42812 34373 38960 42411 43965 39830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29378000 8122 4611 7685 15443 12401 12401 2829 1 9606 Homo sapiens -0.1062120823562509 EYYTQNMER Unmodified 1232.5132 0.51318702 4611 Q9NW64-2;Q9NW64;E5RJW4;E5RHA8 RBM22 Pre-mRNA-splicing factor RBM22 yes no 0 0 0 3 0 1 39.403 39.457 2 1.509E-05 9384 20230619_1882_Aki_TMTPro18x_K_F3 169.44 160.58 22992 19095 22392 22282 28093 31624 28485 28684 43446 35301 33420 33201 36275 29985 29837 37918 41160 36232 21257 17508 22885 22367 28774 31202 29144 29667 43001 35284 34872 33693 36638 31461 31120 37859 39238 34449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26852000 8123 4611 7685 15444 12402 12402 1 9606 Homo sapiens -0.0937690437301626 FAAAPHICSDLK Unmodified 1328.6547 0.6547063 231 B6ETL5;A0A024R397;Q96RD7-2;Q96RD7 PANX1 Pannexin;Pannexin-1 yes no 0 0 0 8 0 1 48.675 48.742 3 0.00018854 12996 20230619_1888_Aki_TMTPro18x_K_F8 99.439 85.776 169990 145000 168230 178710 178490 204290 198940 194220 212230 199040 202460 198510 199660 182950 206710 217860 227880 240900 157220 133010 171280 178050 185180 204390 199820 199240 215050 200910 208090 201070 204320 191070 211300 219620 217920 228510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52686000 8124 231 7686 15445 12403 12403 1 9606 Homo sapiens 0.0035251372012226057 FAAATGATPIAGR Unmodified 1202.6408 0.6407708 205 C9J9K3;A0A8V8TMX1;A0A024R2L6;A0A0C4DG17;A0A8V8TLA4;P08865;A0A8I5KQE6;Q96RS2;A0A024R7P5;F8WD59 RPSA;LOC388524 40S ribosomal protein SA yes no 0 0 0 2.5 1.12 2 2 2 2 46.091 46.142 2;3 3.1818E-07 12599 20230619_1881_Aki_TMTPro18x_K_F2 183.22 163.22 536060 447330 513460 580930 551950 604910 618190 614170 687970 690490 667620 663610 748030 607710 616680 778540 715780 728950 495570 410610 524500 575940 572060 610060 621630 628840 696400 692910 689340 673180 754530 637850 635760 776370 683990 692840 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4425200000 8125 205 7687 15446;15447;15448;15449;15450;15451;15452;15453 12404;12405;12406;12407 12405 4 9606 Homo sapiens 0.04755604283309367 FAADAVK Unmodified 720.38064 0.38063993 1232 A0A140VK56;P37837-2;P37837;Q9UMF8 TALDO1 Transaldolase yes no 0 0 0 6 0.816 1 1 1 45.855 45.938 2 0.023523 12089 20230619_1886_Aki_TMTPro18x_K_F6 105.12 68.921 1023200 623460 853340 988590 1134200 1275800 1128000 1173500 1617600 652860 755000 575120 580140 497290 881640 470270 752610 422600 943310 574380 886130 971410 1157200 1265100 1152000 1191700 1582400 687300 806810 585490 612330 514090 881660 471860 719050 403110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 448150000 8126 1232 7688 15454;15455;15456 12408;12409 12408 2 9606 Homo sapiens 0.009264837431373962 FAALEQPEVER Unmodified 1287.6459 0.64591575 275;1599 A0A024R3Z1;A0A669KB77;P11137-3;P11137 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 0 3 0 2 51.215 51.285 2 0.0045682 14700 20230619_1882_Aki_TMTPro18x_K_F3 90.827 64.225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8127 275;1599 7689 15457;15458 12410;12411 12410 2 9606 Homo sapiens 0.013598633552646788 FAALMQHQAK Unmodified 1143.5859 0.58589846 1830 A0A8V8TMX5;Q9UK59;A0A8V8TMH0 DBR1 Lariat debranching enzyme yes no 0 0 0 3.5 0.5 1 1 47.537 47.596 3 1.6038E-06 12957 20230619_1883_Aki_TMTPro18x_K_F4 140.83 98.499 146220 123530 139560 142260 156900 199310 177500 174030 200910 97776 96704 72359 83528 72607 123920 101290 96642 77722 135180 113250 142660 142890 162390 196550 178400 177460 198850 102340 103480 74811 87632 76387 123660 100090 92599 74140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 301070000 8128 1830 7690 15459;15460 12412 12412 1 9606 Homo sapiens 0.019848942110456846 FAANPNQNK Unmodified 1002.4883 0.4882929 3938 Q15717;Q15717-2 ELAVL1 ELAV-like protein 1 yes no 0 0 0 4.5 3.5 1 1 39.996 39.99 2 5.0614E-06 10080 20230619_1880_Aki_TMTPro18x_K_F1 183.9 125.29 63682 36078 77792 77288 108800 139150 84319 114650 118240 40111 62638 50175 51749 45535 75897 36279 73111 45105 58880 33401 78332 75381 110080 135280 87522 116690 116050 44987 66364 50424 54348 46633 76363 37240 69785 42850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28954000 8129 3938 7691 15461;15462 12413;12414 12413 2 9606 Homo sapiens -0.012851713934310283 FAANSDLK Unmodified 864.43413 0.43413207 2454 B4DDP8;B4DG35;Q9BRR6-2;Q9BRR6;H3BU35;H3BRS6;Q9BRR6-5 ADPGK ADP-dependent glucokinase yes no 0 0 0 7 0 1 46.057 46.145 2 0.046577 11796 20230619_1887_Aki_TMTPro18x_K_F7 72.038 26.408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8130 2454 7692 15463 12415 12415 1 9606 Homo sapiens -0.003507635450091584 FAAQELIEVK Unmodified 1146.6285 0.62847478 4184 Q86U44;F5H6D8;B4DTN4;B4E2F6;H0YFV6 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes no 0 0 0 6 0 1 60.214 60.272 3 0.0029565 18236 20230619_1886_Aki_TMTPro18x_K_F6 77.64 59.832 35253 29585 36817 37222 34665 38912 39842 34641 39313 40281 38700 43391 49717 40437 43027 51635 41698 50246 32615 27146 37242 36985 36306 39123 39856 35860 40083 40507 40256 43811 50058 42407 43848 51604 39968 47707 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53305000 8131 4184 7693 15464 12416 12416 1 9606 Homo sapiens 0.06102567820266813 FAAVGFHK Unmodified 875.46537 0.46537261 2846 D6RCD0;Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes no 0 0 0 3.5 0.5 1 1 47.674 47.733 3 0.0025715 13122 20230619_1882_Aki_TMTPro18x_K_F3 102.72 34.962 315180 231150 276940 292130 338910 388560 366160 347950 429080 345510 364320 350680 408850 310040 332220 376560 411040 380370 290960 212210 285590 291240 348130 384580 369390 358170 430790 349680 378630 354520 412060 324870 343740 377430 392300 361350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 565070000 8132 2846 7694 15465;15466 12417;12418 12417 2 9606 Homo sapiens 0.02265854279744417 FACAVVCIQK Unmodified 1194.5889 0.58893492 3692 P61221;D6R9I9 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 0 0 3.5 0.5 1 1 55.891 55.916 3 5.5435E-05 16754 20230619_1882_Aki_TMTPro18x_K_F3 114.28 81.952 148160 117400 130270 139660 135060 161810 139870 137810 178720 137280 141850 139650 153920 124590 144070 154700 143660 150150 136840 107680 133960 139500 140250 161380 141940 142450 178300 138960 147790 141200 156210 130630 146710 154700 137500 142640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133550000 8133 3692 7695 15467;15468 12419;12420 12419 2 9606 Homo sapiens -0.0005759872644830466 FACHSASLTVR Unmodified 1247.6081 0.60809046 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;C9JYS8;C9IZL7 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 4 1.58 1 1 1 1 38.477 38.549 3 4.0747E-31 8982 20230619_1882_Aki_TMTPro18x_K_F3 234.67 211.75 635220 537010 582580 604220 718160 769290 753910 724500 764670 403270 400240 324810 398540 331740 453160 389670 446900 353370 587090 492200 598400 607010 735970 764430 758030 734620 762820 423060 427500 334140 409540 345110 459100 388880 427010 336360 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 717700000 8134 1112 7696 15469;15470;15471;15472 12421;12422;12423;12424 12423 4 9606 Homo sapiens -0.005809261112290187 FACNGTVIEHPEYGEVIQLQGDQR Unmodified 2759.2973 0.29732759 3166 Q6IAV3;K7EM18;P41567;Q6FG85;Q53F41;O60739;K7EQP2 SUI1;EIF1;GC20;EIF1B Eukaryotic translation initiation factor 1;Eukaryotic translation initiation factor 1b yes no 0 0 0 5 0 1 55.073 55.14 3 2.9359E-27 15875 20230619_1885_Aki_TMTPro18x_K_F5 192.63 178.17 13434 9042.2 13920 16639 10927 17342 12954 15741 16474 20384 18024 19854 21161 16991 13885 27089 23764 21830 12412 8343.7 14077 16171 11688 17420 13068 16309 16670 20328 18559 20089 21156 18152 14865 26723 22628 20797 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45693000 8135 3166 7697 15473 12425 12425 1 9606 Homo sapiens -0.01194917769271342 FADAASLLLSLMTSR Unmodified 1594.8389 0.83887826 3143 J3QL54;Q9BW27-3;Q9BW27;J3KT10;Q9BW27-2;F5H0W7;B3KW81;J3QLH0;J3QS63;J3QL91 NUP85 Nuclear pore complex protein Nup85 yes no 0 0 0 7 0 1 69.001 69.02 3 1.3626E-10 21703 20230619_1887_Aki_TMTPro18x_K_F7 153.09 129.85 2992.1 4990.8 4539.5 2548 5382.4 3839 3503.5 6004.9 5141.9 2282.5 2118.8 2259.4 2674.1 2890.1 2763.8 3649.8 3410.9 2107.4 2796.5 4543.2 4479.5 2806.9 5456.1 3846.1 3699.2 5874 5019.8 2507.6 2342.1 2322.5 2723 2995 2849 3567.4 3248.2 2022.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3131000 8136 3143 7698 15474 12426 12426 1 9606 Homo sapiens 0.06525237360165193 FADDTYTESYISTIGVDFK Unmodified 2170.9946 0.99464644 3725;4495 Q5U0I6;P62820;B7Z8M7;P62820-3;Q9H0U4;E9PLD0;Q9H1C9 RAB1A;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-1B no no 0 0 0 6 0 1 64.148 64.195 3 5.7091E-20 19992 20230619_1886_Aki_TMTPro18x_K_F6 188.27 177.16 112680 74206 99954 112370 87738 93213 108610 93343 104730 104580 125590 124620 126770 117180 109690 135790 119460 144100 103970 68300 102480 110050 92630 95696 108200 95766 107710 105710 127920 125410 128590 122060 112540 136550 114380 136690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 323190000 8137 3725;4495 7699 15475 12427 12427 1 9606 Homo sapiens -0.04401110166054423 FADEHVPGSPFTVK Unmodified 1529.7514 0.75144346 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4;A0A0C4DGA1 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 7 0 1 52.946 53.017 3 8.9072E-05 14927 20230619_1887_Aki_TMTPro18x_K_F7 96.464 75.607 137380 126340 119540 134700 124960 144880 145140 131920 159770 146060 181580 165980 171910 131780 168480 163350 162130 168130 126990 115710 123100 135520 130010 145480 145610 136110 162690 147480 184750 166520 175460 138790 171000 163940 155230 159620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96786000 8138 3299 7700 15476 12428 12428 1 9606 Homo sapiens 0.007757794808640028 FADFMVK Oxidation (M) 872.41023 0.4102255 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4;A0A6Q8PHI7;H7C443;A0A6Q8PFZ6;A0A6Q8PF45;A0A6Q8PH49;A0A6Q8PGN7;F8WCK4;A0A6Q8PGZ9 GARS Glycine--tRNA ligase yes no 0 1 0 8 0 1 55.645 55.707 3 0.041108 16000 20230619_1888_Aki_TMTPro18x_K_F8 58.64 25.698 65484 51311 56705 68112 62100 64178 66015 62053 67143 70472 81359 91820 73405 69628 78836 88598 70297 94855 60468 47121 58477 67332 64158 65156 66381 63812 68907 71397 82550 91478 75456 73515 79668 89048 67512 89937 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29709000 8139 3576 7701 15477 12429 12429 2245 1 9606 Homo sapiens -0.03108320303022083 FADGEVVR Unmodified 891.44503 0.4450311 260 A0A024R3R5;Q14739;A0A494C1L1;C9JXK0;B4E0Z3;C9JES9 LBR Lamin-B receptor yes no 0 0 0 2.5 0.5 1 1 42.441 42.513 2 0.0065878 10697 20230619_1882_Aki_TMTPro18x_K_F3 110.12 60.761 438980 347980 415620 410690 403680 485650 433250 408230 500630 495390 499900 479670 562820 466300 463240 616190 582540 558580 405660 319160 423960 410640 421490 483600 437280 424780 506340 495680 515470 487530 567740 489370 480220 613120 556060 531240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281700000 8140 260 7702 15478;15479 12430;12431 12431 2 9606 Homo sapiens -0.005033611707062846 FADGSIR Unmodified 764.3817 0.38170256 21 A0A024QZ30;P31040;P31040-2;D6RFM5;B3KT34;Q0QF12;P31040-3;B3KYA5;B4DYN5;H0Y8X1 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 4 0.816 1 1 1 40.425 40.487 2 0.0057555 9733 20230619_1885_Aki_TMTPro18x_K_F5 138.37 72.47 392770 310280 329850 322550 479060 441720 406480 435980 552220 421740 483070 507560 518200 440140 430770 499390 564230 511470 362630 284270 342380 326530 483590 437840 418500 445200 551270 429860 500470 509140 523770 459320 447280 501400 538190 485860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 658000000 8141 21 7703 15480;15481;15482 12432 12432 1 9606 Homo sapiens -0.009913018879501578 FADLSEAANR Unmodified 1092.52 0.51998696 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 0 0 4 0.816 1 1 1 47.866 47.932 2 1.623E-13 13171 20230619_1882_Aki_TMTPro18x_K_F3 224.36 171.19 1200400 898550 999670 887400 2042000 2337700 1632100 1584300 2044100 1781900 1836400 1775900 1981700 1645200 1658900 1912300 1864100 1809400 1107800 823040 1047500 916110 2029400 2236400 1680900 1674100 2051200 1791600 1899500 1799000 2002500 1715600 1705300 1911100 1781200 1719800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 14286000000 8142 3414 7704 15483;15484;15485 12433;12434;12435 12433 3 9606 Homo sapiens -0.022572234301378558 FADQDDIGNVSFDR Unmodified 1597.7009 0.70086445 336 Q5H9R7-5;Q5H9R7;Q5H9R7-2;Q5H9R7-6;Q5H9R7-4;E9PKF6;H7BXH2;A0A024R5F3;Q5H9R7-3;E9PQP7;B4DYU6;B4DTT7;B4E0C2;H0YEN2;Q7L294 PPP6R3;SAPS3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 0 0 0 2.5 0.5 1 1 55.137 55.157 2 5.781799999999999E-46 16652 20230619_1881_Aki_TMTPro18x_K_F2 292.73 266.13 63106 53087 57812 53398 42795 55338 51993 51752 59634 78414 80040 69449 83042 73442 73212 82714 79061 84263 58322 48610 58917 53975 45974 55748 52178 53826 61206 77533 81212 71077 84198 76122 74997 83034 75625 79998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106580000 8143 336 7705 15486;15487 12436;12437 12436 2 9606 Homo sapiens -0.07407794634809761 FADQHVPGSPFSVK Unmodified 1514.7518 0.75177781 3484 P21333;P21333-2;Q60FE5;Q60FE6;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91 FLNA;FLJ00119 Filamin-A yes no 0 0 0 1 0 1 51.716 51.716 3 0.00083856 15080 20230619_1880_Aki_TMTPro18x_K_F1 83.692 71.331 49922 42236 50243 48431 75805 90062 60741 66374 119640 66667 83246 87323 72247 62279 75606 52199 73910 80320 46174 38718 51393 48939 76488 87348 63893 69402 116900 68121 86648 86792 74256 64561 76598 54275 70778 75967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89962000 8144 3484 7706 15488 12438 12438 1 9606 Homo sapiens 0.014991992007480803 FADVLVHR Unmodified 955.52395 0.52395013 4211 Q8IYB7;Q8NF60 DIS3L2;FLJ00327 DIS3-like exonuclease 2 yes no 0 0 0 8 0 1 47.107 47.155 3 0.00024003 12325 20230619_1888_Aki_TMTPro18x_K_F8 143.85 112.48 27798 19848 24684 25698 23124 25217 29342 25991 27597 31553 35425 27314 34203 28827 28872 39771 35409 33404 25660 18229 25318 25468 24303 25555 29173 26657 28531 31458 35866 28025 34693 30262 29874 39401 33802 31802 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47806000 8145 4211 7707 15489 12439 12439 1 9606 Homo sapiens 0.0444091085423679 FAEAFEAIPR Unmodified 1149.5819 0.58185893 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 6.5 0.5 1 1 60.234 60.286 2 0.00072699 18215 20230619_1886_Aki_TMTPro18x_K_F6 118.18 55.977 759980 674070 691930 761240 648310 745620 730830 756780 858210 887140 823660 896220 954830 818600 895240 1090300 981350 1099000 702580 617740 708310 761620 679630 755590 736280 775880 866260 889810 853050 906880 967690 861370 917260 1091100 938930 1043300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1472599999.9999998 8146 3621 7708 15490;15491 12440;12441 12440 2 9606 Homo sapiens 0.013051279889850775 FAEALGSTEAK Unmodified 1122.5557 0.55570376 2144;1327 A0A1W6S962;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9;A0A494C0Q7 GTF2I General transcription factor II-I no no 0 0 0 4 0 1 51.544 51.572 3 0.0016834 14712 20230619_1883_Aki_TMTPro18x_K_F4 84.198 58.155 186320 168500 184640 164750 168800 211960 203040 202970 239600 160880 152520 141320 165580 141690 186570 195380 215650 159360 172390 154220 187390 167480 177750 210560 203840 206790 238320 164430 161160 144540 169690 148940 190980 193440 205660 151950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108250000 8147 1327;2144 7709 15492 12442 12442 1 9606 Homo sapiens -0.0006718597314829822 FAEFLLPLLIEK Unmodified 1431.8377 0.83773927 4399 Q96T76;Q96T76-8;Q96T76-9;Q96T76-5;Q5T454;Q96T76-7 MMS19 MMS19 nucleotide excision repair protein homolog yes no 0 0 0 3 0 1 68.015 68.061 3 0.01348 21748 20230619_1882_Aki_TMTPro18x_K_F3 64.55 49.674 2926.2 2778.3 1270.7 3208 2737.1 3448.1 2530.7 2674.1 3126.5 4286.2 3152.9 3106.3 3864.2 5024.7 3551.5 3908.9 3408 3561.7 2695.8 2546 1462.9 3203.8 2730.4 3450.6 2580.3 2827.9 3161.2 4211.4 3264.9 3269.7 3917.8 5053.8 3611 3927.4 3263.2 3386.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1060900 8148 4399 7710 15493 12443 12443 1 9606 Homo sapiens 0.13909391053539366 FAEFQYLQPGPPR Unmodified 1548.7725 0.77251325 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24;E5RHJ4 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 1.5 0.5 1 1 60.576 60.582 2 0.00015664 18849 20230619_1881_Aki_TMTPro18x_K_F2 137.98 106.55 64109 62346 63529 73247 74876 80451 73781 85997 77508 92570 82366 74638 89371 78621 84195 93299 86055 95287 59345 57139 64810 73181 76823 80947 74615 87586 79059 92620 84546 76753 90758 81763 85863 93606 82383 90449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114790000 8149 2414 7711 15494;15495 12444 12444 1 9606 Homo sapiens 0.020077895803979118 FAEHGETLAMK Oxidation (M) 1248.5809 0.58087266 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;A0A8V8TPI7;Q58F05;Q9BXJ9-4;A0A8V8TQT7;A4FU51;Q6N069;Q6N069-2;Q6N069-5;Q6N069-4;Q6N069-3 NAA15;NARG1;NARG1L;NAA16 N-alpha-acetyltransferase 15, NatA auxiliary subunit;N-alpha-acetyltransferase 16, NatA auxiliary subunit yes no 0 1 0 5 0 1 41.461 41.546 3 0.001868 10176 20230619_1885_Aki_TMTPro18x_K_F5 76.927 53.322 129070 91899 111280 124720 140340 146870 125710 142110 171640 179570 197580 187040 175300 138330 152110 146830 176210 180950 119120 84447 115020 123510 143150 146720 129080 146430 173330 179650 200380 187800 178430 144860 156390 149350 168390 171490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 369900000 8150 2297 7712 15496 12445 12445 1421 1 9606 Homo sapiens -0.03347454442223352 FAEHGETLAMK Unmodified 1232.586 0.58595803 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;A0A8V8TPI7;Q58F05;Q9BXJ9-4;A0A8V8TQT7;A4FU51;Q6N069;Q6N069-2;Q6N069-5;Q6N069-4;Q6N069-3 NAA15;NARG1;NARG1L;NAA16 N-alpha-acetyltransferase 15, NatA auxiliary subunit;N-alpha-acetyltransferase 16, NatA auxiliary subunit yes no 0 0 0 4.5 0.5 1 1 45.297 45.358 3 7.902E-06 11797 20230619_1885_Aki_TMTPro18x_K_F5 144.17 102.17 163460 121980 137000 155400 139780 150240 152050 130020 153280 195670 199980 186830 197670 146940 172700 205820 202180 196510 150860 111990 141510 154090 145310 151890 152650 136080 158130 193890 202780 188740 200480 156100 177860 205250 193120 186770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198070000 8151 2297 7712 15497;15498 12446 12446 1 9606 Homo sapiens -0.02103150579614521 FAEHVFR Unmodified 904.45554 0.45553621 3561;2294 P61601;B2RB70;Q5U068;E5RFL9;E5RGA9;E5RIA5;E5RIZ1;E5RIG4;E5RHC8;E5RK89;E5RHE8;A0A1B0GXG3;E5RI95;E5RGZ0;E5RJJ6;E5RJT1;Q59GU4;E5RI78;Q6FGY1;P37235;P84074;Q68CP5;E9PC71 NCALD;HPCAL1;HPCA;DKFZp781K1922 Neurocalcin-delta;Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin no no 0 0 0 7.5 0.5 1 1 41.655 41.689 3 0.0014123 9932 20230619_1887_Aki_TMTPro18x_K_F7 135.87 63.632 171000 135380 156810 163830 158140 211560 201190 199160 281320 227630 234360 282630 308890 265350 202210 349740 339720 374140 157980 124200 160610 163750 165770 209920 202740 205060 280060 230370 246110 283900 308030 278740 215910 350970 323950 354970 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 237850000 8152 2294;3561 7713 15499;15500 12447;12448;12449 12447 3 9606 Homo sapiens -0.0005133372562795557 FAELAQIYAQR Unmodified 1308.6826 0.68263561 4576 V9HW91;Q9NQR4;H7C579 HEL-S-8a;NIT2 Omega-amidase NIT2 yes no 0 0 0 1.5 0.5 1 1 61.548 61.553 2 0.0001408 19275 20230619_1881_Aki_TMTPro18x_K_F2 150.81 121.43 231970 206720 215850 233870 202910 261680 245710 235220 252910 219830 215090 222320 233980 203420 251290 274270 252140 270450 214490 189440 220580 234350 213240 261850 245480 241780 255680 223150 223450 225070 239090 214190 255400 274180 241370 256840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230680000 8153 4576 7714 15501;15502 12450 12450 1 9606 Homo sapiens 0.04064159971835579 FAEMEER Oxidation (M) 926.38038 0.38038194 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 1 0 1 0 1 35.352 35.352 2 0.065527 8114 20230619_1880_Aki_TMTPro18x_K_F1 71.922 18.347 64892 51315 58505 60528 77055 75140 76273 76462 87409 72472 87091 80163 93113 75139 77065 78996 94188 82256 59943 47065 60248 60579 78493 74932 77283 77899 88356 73719 89572 80903 94060 77899 79594 79512 89871 78137 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121520000 8154 1005 7715 15503 12451 12451 570 1 9606 Homo sapiens -0.08575304039015919 FAEMEER Unmodified 910.38547 0.38546731 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 0 1.5 0.5 1 1 42.882 42.923 2 0.013493 11390 20230619_1880_Aki_TMTPro18x_K_F1 113.89 71.414 91544 65586 94886 93889 110850 126910 104340 122580 113560 115000 136010 136150 127030 114500 125460 129750 170560 143990 84608 60303 96348 92909 113730 125670 105950 125240 116060 117240 138110 136550 129950 119600 130100 130930 162570 136710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165350000 8155 1005 7715 15504;15505 12452 12452 1 9606 Homo sapiens -0.07331000176407088 FAEPIGGFQCVFPGC Unmodified 1684.7378 0.737784 1224 A0A140VK39;Q9Y570;Q9Y570-4;Q9Y570-2 PPME1 Protein phosphatase methylesterase 1 yes no 0 0 0 5.33 3.09 1 1 1 65.812 65.827 2;3 1.0725E-10 20260 20230619_1888_Aki_TMTPro18x_K_F8 156.69 144.13 43742 32562 38144 41041 35035 44834 47831 42169 50369 55865 49975 42981 50828 43640 46191 53106 52170 58596 40381 29892 39199 40798 37037 44973 47550 43637 51187 55335 51285 44254 51635 45522 47423 53497 49903 55573 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 270970000 8156 1224 7716 15506;15507;15508 12453;12454 12454 2 9606 Homo sapiens -0.07719537614207184 FAETQPK Unmodified 819.41267 0.41266834 3510 Q53YD7;P26641;P26641-2 EEF1G Elongation factor 1-gamma yes no 0 0 0 5.5 0.5 2 2 41.292 41.382 2;3 0.0046936 10099 20230619_1885_Aki_TMTPro18x_K_F5 154.01 115.77 377840 248800 440000 479700 534510 636740 470490 552990 578750 457550 658520 781610 656120 604800 573670 400220 846550 841550 349430 229760 443490 467010 546370 629420 481800 568040 586070 477520 672510 771980 666330 619140 598800 430770 807300 794650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 417570000 8157 3510 7717 15509;15510;15511;15512 12455;12456 12455 2 9606 Homo sapiens -0.004261485737174553 FAEVYFAQSQQK Unmodified 1444.6987 0.69867961 2970 F5H1S8;Q14165;H0YG07;F5GX14 MLEC Malectin yes no 0 0 0 1 0 1 57.578 57.578 3 0.00019826 17538 20230619_1880_Aki_TMTPro18x_K_F1 98.156 71.624 54274 46030 58757 59386 52892 64235 52950 59438 69322 57133 60357 57957 61605 58296 59179 61600 64125 68953 50231 42245 59228 58939 55468 64457 53932 60981 69307 57925 62388 58831 62767 60287 60507 62258 61340 65396 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92886000 8158 2970 7718 15513 12457 12457 1 9606 Homo sapiens -0.0058817858191559935 FAEWCLDYGAHGCR Unmodified 1740.7137 0.71369452 2416 B4DWZ7;B3KTN5;Q9NS86 LANCL2 LanC-like protein 2 yes no 0 0 0 7 0 1 53.061 53.131 3 5.1466E-10 14979 20230619_1887_Aki_TMTPro18x_K_F7 142.1 126.59 97462 84009 104730 114190 115820 125620 139470 142940 149720 132980 150380 137290 140950 117500 146850 164850 154280 133590 90206 77141 106040 112980 120000 126520 139560 144530 151890 135050 153790 138650 144430 124310 149730 163100 147400 127290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82950000 8159 2416 7719 15514 12458 12458 1 9606 Homo sapiens -0.12703378047876868 FAEWCLEYGEHGCR Unmodified 1812.7348 0.73482389 277 Q6FHH6;Q53TN2;B2R602;A0A024R3Z5;O43813;H7C2E3 LANCL1 LanC-like protein 1 yes no 0 0 0 5 0.816 1 1 1 52.683 52.741 3 7.2083E-10 14898 20230619_1885_Aki_TMTPro18x_K_F5 168.89 164.71 61313 47795 55564 71453 57309 66714 66369 67267 71153 66491 69935 74382 69478 65780 73347 72566 76538 80564 56634 43952 57051 70106 59669 67799 66548 68686 72156 67482 71844 74852 71158 68474 74688 73269 73228 76420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216960000 8160 277 7720 15515;15516;15517 12459 12459 1 9606 Homo sapiens -0.13903412739045962 FAEYGEIK Unmodified 955.4651 0.46509784 6 A0A023T787;Q9Y5S9;Q9Y5S9-2;A0A0J9YW13 RBM8;RBM8A RNA-binding protein 8A yes no 0 0 0 5 0.816 1 1 1 52.014 52.062 2;3 0.0019893 14628 20230619_1885_Aki_TMTPro18x_K_F5 147.34 93.781 692840 505860 537900 649480 598820 830560 682150 667820 980230 781660 787920 933560 1081900 885010 667030 1214300 1003300 1087300 639030 464510 561140 646130 621720 821860 691830 696590 973760 789280 830730 939550 1075300 931750 707200 1206100 957260 1033700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 607440000 8161 6 7721 15518;15519;15520 12460;12461;12462 12461 3 9606 Homo sapiens -0.014416102307677647 FAFDYATK Unmodified 961.45453 0.45453316 870 A0A087X2E5;A0A087WZN1;O43837-2;O43837;O43837-3 IDH3B Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes no 0 0 0 8 0 1 56.567 56.624 2 0.00080224 16404 20230619_1888_Aki_TMTPro18x_K_F8 155.75 110.04 84966 70301 81430 86254 85831 98326 98882 100580 101780 100920 102710 97621 119390 88849 92228 126600 112740 117180 78544 64493 83122 85967 89173 98551 99046 102590 103590 101870 106010 99045 119960 93988 95586 125970 107700 111390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124770000 8162 870 7722 15521 12463 12463 1 9606 Homo sapiens -0.027735928852052893 FAFPLSLFQGSSDGVEVR Unmodified 1954.9789 0.97887721 1528 Q13144;A0A3B3IUB1;A0A3B3IRP4;A0A3B3ITG6;A0A3B3ISX3;A0A3B3ISM8;A0A3B3IUF2;A0A3B3IS56;A0A3B3ISS1;A0A3B3ITQ2;A0A3B3ISV1;A0A3B3ISI2;A0A3B3IST9 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes no 0 0 0 2 0 1 65.455 65.463 3 1.2021E-09 21010 20230619_1881_Aki_TMTPro18x_K_F2 133.71 116.21 6343.8 5402.3 6151.2 6938.3 5443.5 6682.9 6647.2 5529.9 9846.7 6772.2 7038.3 7054.4 5376.9 7058.7 7451 6859 6093.9 8040.2 5865.9 4957.7 6259.6 6875.2 5754.1 6749.5 6726.9 5768.8 9725.4 6796.9 7283.7 7147.2 5656.1 7261.2 7463.2 6964.8 5857.2 7616.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12917000 8163 1528 7723 15522 12464 12464 1 9606 Homo sapiens 0.039586928981862 FAFQAEVNR Unmodified 1080.5352 0.53524309 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0TAY2;Q59FC6;A0A7P0TBC2;Q96GW1;A0A7P0T885;A0A7P0T8R3;A0A7P0Z405;B4DQX3 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 6 0 1 49.822 49.899 2 0.037298 13883 20230619_1886_Aki_TMTPro18x_K_F6 69.338 57.491 119690 84673 102710 124370 106370 108090 121170 136380 156250 142490 132450 140550 150770 123120 124870 177960 161210 158090 110450 77880 105930 122100 110620 111170 122420 137500 156260 143600 137840 142240 152090 130480 129730 176670 153870 150370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97694000 8164 3452 7724 15523 12465 12465 1 9606 Homo sapiens -0.001803118423140404 FAGASIK Unmodified 692.38573 0.38572531 3211 O00425;O00425-2;B4DKT5;F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1 IGF2BP3;IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 3;Insulin-like growth factor 2 mRNA-binding protein 2 yes no 0 0 0 2 0 1 46.647 46.727 2 0.063545 12924 20230619_1881_Aki_TMTPro18x_K_F2 74.415 18.974 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8165 3211 7725 15524 12466 12466 1 9606 Homo sapiens 0.027227876057509093 FAGHSEAGGGSGDR Unmodified 1303.5541 0.55414063 94 A8K724;A0A024R0J1;O96013 PAK4 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 4 yes no 0 0 0 2 0 1 27.706 27.783 3 2.9909E-05 4911 20230619_1881_Aki_TMTPro18x_K_F2 108.66 99.889 7002.7 3974.4 5670.9 6340.9 9131.5 9949 7418.8 7671.4 7250.6 5513.8 8108.5 7370.2 6706.5 6459.2 5502.4 2975.6 7444.8 5521.1 6452.6 3663.2 5927.2 6250.1 9166.3 9729.8 7574.9 7934.7 7422.5 5748.6 8210.9 7363.5 6837 6507.8 5708.2 3199.7 7091 5224 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13442000 8166 94 7726 15525 12467 12467 1 9606 Homo sapiens -0.08549427009188548 FAGLHFFNPVPVMK Oxidation (M) 1618.833 0.83300502 1026 Q16836-2;Q16836-3;Q16836;E9PF18;A0A0D9SFP2;B3KTT6;A0A140VK76;B2RB06;A0A0A0MSE2;A0A1W2PNM1;A0A804HKJ2;A0A1W2PQV5;A0A804HJW7;A0A1W2PRT2;A0A1W2PQC2 HADH Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes no 0 1 0 6 0 1 61.349 61.404 3 0.001015 18695 20230619_1886_Aki_TMTPro18x_K_F6 75.479 63.118 95526 72510 86263 93459 93206 78684 94879 89190 105590 106440 100870 110620 118590 99248 107190 129150 132230 132470 88220 66576 88512 92480 96145 81002 95902 90899 106840 106770 104570 111720 119950 104350 110700 129420 126280 125780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 770230000 8167 1026 7727 15526 12468 12468 595 1 9606 Homo sapiens 0.048341836391045945 FAGQMGIQLFETSAK Oxidation (M) 1642.8025 0.80249275 3926 Q15286;F5H157 RAB35 Ras-related protein Rab-35 yes no 0 1 0 1.5 0.5 1 1 60.994 61 3 1.9712E-05 18869 20230619_1880_Aki_TMTPro18x_K_F1 100.54 78.328 32749 21817 26589 32938 30263 26546 30398 28883 33595 36428 36155 36495 41256 33501 33733 43344 38793 46223 30200 20079 27605 32250 31110 27394 30743 29565 34174 36407 37195 36953 41578 35192 34770 43526 37119 43845 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139690000 8168 3926 7728 15527;15528 12469 12469 2599 1 9606 Homo sapiens 0.006803604634342264 FAGSGNEENRNNAYPHK Unmodified 1903.8561 0.85613631 4242 Q8NBF2;Q7Z658;Q8NBF2-2 NHLRC2;DKFZp779F115 NHL repeat-containing protein 2 yes no 0 0 1 6.5 0.5 1 1 36.336 36.4 4 5.6135E-06 7853 20230619_1887_Aki_TMTPro18x_K_F7 108.25 78.522 25209 22197 22195 22202 23863 22280 24162 23443 25166 29804 36499 33534 35033 29147 29751 33669 38788 30855 23298 20321 22816 22442 24636 22578 24389 24043 26043 29882 36824 33739 35548 30445 30863 33597 36970 29365 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57392000 8169 4242 7729 15529;15530 12470 12470 1 9606 Homo sapiens -0.05963750780438204 FAGVDIR Unmodified 776.41809 0.41808807 3200 M0R210;P62249;M0R3H0;M0R1M5;M0QX76;Q6IPX4;B4DP32 RPS16 40S ribosomal protein S16 yes no 0 0 0 6 0.816 1 1 1 48.098 48.179 2 0.025253 12834 20230619_1887_Aki_TMTPro18x_K_F7 98.133 37.172 292260 239950 292540 300150 298200 356980 348890 336270 403700 365190 354310 327950 383450 297790 333280 402870 375400 351210 270250 220180 297350 298930 310900 356110 350480 345700 406170 366490 366930 333790 387900 313820 342480 400070 358610 334220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4841400000 8170 3200 7730 15531;15532;15533 12471;12472 12472 2 9606 Homo sapiens 0.02093575008757398 FAGVFHVEK Unmodified 1032.5393 0.53926584 1496 P16070;P16070-11;H0YD13;B4DN59;A8K309;A0A385KNS5;P16070-7;P16070-12;P16070-14;P16070-13;P16070-8;P16070-10;P16070-17;P16070-3;P16070-16;P16070-6;P16070-4;P16070-18;P16070-5;A0A1Z1VXF2;P16070-15;P16070-9;H0Y5E4;H0YDW7;H0YCV9;E9PKC6;C1PHC3;Q86UZ1;P16070-19 CD44 CD44 antigen yes no 0 0 0 1.5 0.5 1 1 51.474 51.497 3 0.00016782 14949 20230619_1880_Aki_TMTPro18x_K_F1 115.71 74.525 332170 263660 290570 250560 320360 357670 302980 290240 344360 228120 240560 195510 205560 186480 327130 250090 247540 199930 306770 241370 298800 255770 330130 352150 307760 299460 344000 233180 250140 199970 216760 195920 325680 247760 237290 190600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342420000 8171 1496 7731 15534;15535 12473;12474 12473 2 9606 Homo sapiens 0.024297776514231373 FAGVVPPVAGPWLGVEWDNPER Unmodified 2391.2012 0.20116601 1356 Q15813-2;Q15813;A0A2R8Y5Q8;A0A2R8YHI9;A0A2R8Y7E7;A0A2U3TZJ6;A0A2R8YER9;A0A2R8YFL4;A0A2R8Y809;A0A2R8Y4V6;A0A2R8Y784;A0A2R8YFM3;A0A2R8Y4P2;A0A2R8Y787;A0A2R8Y5H6;A0A2R8Y6G3;A0A2R8YF12 TBCE Tubulin-specific chaperone E yes no 0 0 0 8 0 1 65.569 65.589 3 3.3645E-23 20184 20230619_1888_Aki_TMTPro18x_K_F8 171.79 162.26 10782 6736.7 9242.9 7636.6 7995.9 10438 10306 10160 10366 10906 8627.9 10232 12152 12273 12879 11195 10938 11963 9943.3 6182.9 9491.2 7681.7 8480.7 10332 10260 10414 10499 10964 9106.7 10480 12337 12530 12967 11319 10492 11351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40252000 8172 1356 7732 15536 12475 12475 1 9606 Homo sapiens 0.06121347243652053 FAHLLDQVSR Unmodified 1184.6302 0.63020611 1130 Q53H36;A0A0S2Z5J9;Q96SZ6-2;Q96SZ6-6;Q96SZ6-3;Q96SZ6;B4DI01;Q96SZ6-5 CDK5RAP1 CDK5 regulatory subunit-associated protein 1 yes no 0 0 0 2 0 1 51.975 52.014 3 2.4723E-18 15322 20230619_1881_Aki_TMTPro18x_K_F2 183.72 162.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8173 1130 7733 15537 12476 12476 1 9606 Homo sapiens 0.045276216288812066 FAHNVVTTR Unmodified 1043.5512 0.55122751 2792 CON__Q0V8M9 yes yes 0 0 0 2 0 1 34.447 34.504 3 0.00023001 7482 20230619_1881_Aki_TMTPro18x_K_F2 122.44 85.749 + 76425 87819 71369 77829 118140 104080 94990 99449 127500 89233 107250 116880 79579 98239 102570 93673 98266 98802 70808 80256 73632 79834 118250 103280 98087 101620 127110 91645 109870 116730 83405 101550 103610 94551 94065 93786 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72139000 8174 2792 7734 15538 12477 12477 1 0.031193943945936553 FAIETVK Unmodified 806.4538 0.45380487 4609 Q9NVV4 MTPAP Poly(A) RNA polymerase, mitochondrial no no 0 0 0 7 0 1 52.589 52.659 2 0.0065321 14751 20230619_1887_Aki_TMTPro18x_K_F7 132.29 74.726 131670 101340 111860 122060 109710 140170 138320 129730 129490 137550 140780 150850 152880 130490 143580 161570 169320 160390 121560 92979 115340 121810 115040 140080 137540 133490 132920 138980 144540 151850 155230 136900 147680 161750 161690 152390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31442000 8175 4609 7735 15539 12478 12478 1 9606 Homo sapiens 0.04283612465758324 FAIQDISVEETSAK Unmodified 1536.7672 0.7671531 387;1069 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;G3V2N5;A0A804HJQ9;G3V2W4;B4DRP5;A0A494C1A0;P35609;P35609-2;A0A804HI95;A0A804HJN7;B7Z2N5;Q08043;B2R8Y4;G3V2X9;A0A087WSZ2;B4DZQ2;B7Z4V1;G3V5M4;A0A804HKG0;A0A494C033;A0A494C166;G3V2E8;F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;B4E337;B4DSX0 ACTN1;ACTN2;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 no no 0 0 0 3.5 1.12 1 1 1 1 59.115 59.139 2;3 1.3837E-08 17955 20230619_1883_Aki_TMTPro18x_K_F4 148.52 128.09 215590 177560 197890 193010 181570 201500 230130 210890 259240 276700 242080 249040 264500 206720 346470 321610 287360 287060 199220 162710 202240 193900 191250 203410 230080 216570 261950 275230 250440 252680 272980 220780 347480 319470 275510 273020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1166700000 8176 387;1069 7736 15540;15541;15542;15543 12479;12480;12481 12480 3 9606 Homo sapiens 0.020240212072621944 FALACNASDK Unmodified 1095.5019 0.50189405 2664 Q75MT5;B5BUD2;P35250-2;P35250;A0A087WVY3;H7C5P4 RFC2 Replication factor C subunit 2 yes no 0 0 0 7.5 0.5 1 1 49.027 49.102 2 2.8933E-05 13143 20230619_1888_Aki_TMTPro18x_K_F8 150.35 123.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8177 2664 7737 15544;15545 12482;12483 12483 2 9606 Homo sapiens -0.0420368167651759 FALEVAAK Unmodified 847.48035 0.48035398 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B3KU93;A0A8V8TQ95;B3KTP2;A6NEC2;E9PPZ2;B7Z6T6;A6NEC2-2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 8 0 1 55.113 55.18 3 0.032089 15791 20230619_1888_Aki_TMTPro18x_K_F8 64.265 22.835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8178 2933 7738 15546 12484 12484 1 9606 Homo sapiens 0.05051301357093507 FALGIFAINEAVESGDVGK Unmodified 1935.9942 0.99419293 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;A0A0J9YXZ5;Q6P1N4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 7.5 0.5 1 1 65.679 65.701 3 0.00013105 20241 20230619_1888_Aki_TMTPro18x_K_F8 76.151 53.498 6320.7 5895.7 6761.3 7115.5 8147.2 6316.7 6140.6 5125.5 6587 7300.8 7697.7 9220.1 9223.8 7941.6 7855.9 7515.9 7662.4 7496 5853 5405.5 6849.5 7075 8276.9 6430.9 6324 5384.9 6738.6 7320.7 7922.7 9220.3 9298.9 8209.1 7999.5 7562.3 7332 7120.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57193000 8179 707 7739 15547;15548 12485 12485 1 9606 Homo sapiens 0.06363559695387266 FALITWIGENVSGLQR Unmodified 1802.9679 0.9679186 1447 Q14019;A0A384MTY2;H3BT58 COTL1 Coactosin-like protein yes no 0 0 0 6 0 1 66.527 66.57 3 8.0536E-05 20985 20230619_1886_Aki_TMTPro18x_K_F6 94.45 74.024 4695.9 3491.8 2983.4 3254.1 5314.3 3447.4 4709.1 4692.8 7086.9 4968.9 4633.5 3425.3 4370.3 3824.7 4983.7 4269 4661.5 5759 4326.6 3197 3207 3312.8 5309 3509 4851.4 4712.8 6982.7 4964.6 4850.6 3564.3 4499.4 3960.1 5035.6 4367.8 4470.8 5450.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10941000 8180 1447 7740 15549 12486 12486 1 9606 Homo sapiens 0.09855335314591684 FAMEPEEFDSDTLR Oxidation (M) 1701.7192 0.71921663 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 1 0 1.5 0.5 1 1 54.278 54.29 2 4.4481E-22 16304 20230619_1881_Aki_TMTPro18x_K_F2 235.06 227.69 68971 52162 54868 60239 72475 73127 74790 61726 81913 77863 82198 84885 92246 74611 78103 104610 89544 109010 63638 47842 57205 60340 73930 72741 75448 64315 83070 78069 84775 85547 93140 78913 80456 104790 85699 103420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99439000 8181 909 7741 15550;15551 12487;12488 12488 515 2 9606 Homo sapiens -0.10357420775085302 FAMEPEEFDSDTLR Unmodified 1685.7243 0.72430201 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 2 0.816 1 1 1 60.198 60.212 2;3 1.4134E-21 18686 20230619_1881_Aki_TMTPro18x_K_F2 223.87 207.98 101400 82599 100140 117580 80234 107610 117530 117260 122510 143790 132090 139050 148590 130820 133100 155940 153970 172040 93748 75901 101670 115700 86045 109710 116520 119850 125020 143700 135860 141070 150440 136570 136900 157130 147240 163170 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 196030000 8182 909 7741 15552;15553;15554 12489;12490;12491 12490 3 9606 Homo sapiens -0.09113116912453734 FANFIEK Unmodified 867.44905 0.44905385 2433 B3KWQ6;P41219;P41219-2;F8W835 PRPH Peripherin yes no 0 0 0 4.2 2.79 1 1 1 1 1 57.465 57.496 2 0.011376 17464 20230619_1880_Aki_TMTPro18x_K_F1 121.99 24.516 5086600 4210000 4620200 4822300 3530200 4274300 4446500 4337300 4910700 5929900 6465700 6978500 6380000 6027300 6947900 6848700 6928000 7595700 4700300 3859700 4716900 4814300 3782100 4366100 4448000 4471600 5041300 5937400 6562400 7002700 6544400 6289800 7053700 6911600 6633500 7204100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1804799999.9999998 8183 2433 7742 15555;15556;15557;15558;15559 12492;12493 12492 2 9606 Homo sapiens 0.010027283229874229 FANLNEQAAR Unmodified 1132.5625 0.56252048 3949 Q16352;Q59EM6 INA Alpha-internexin yes no 0 0 0 6 0.816 1 1 1 42.913 42.998 2 2.0598E-05 10756 20230619_1886_Aki_TMTPro18x_K_F6 160.16 136.31 529330 448200 506950 396420 162240 171300 200020 213300 214920 473820 562540 552410 515960 446010 487900 541830 611430 566990 489400 409990 510680 402440 196900 191920 201090 222390 232690 466710 558650 553550 526730 468590 503720 544210 583510 538430 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 394760000 8184 3949 7743 15560;15561;15562 12494;12495;12496 12495 3 9606 Homo sapiens 0.001541716980682395 FANNPSQK Unmodified 904.44028 0.44028008 1058;3893;945 Q96J71;Q14576;Q14576-2;P26378-4;A0A494C0F8;P26378;P26378-3;P26378-1;P26378-5;P26378-2;A0A494C147;B1APY9;A0A494C1D9;A0A0R4J2E6;B7Z5E0;A0A494C015;A0A494C173;A0A0A0MRX1;Q12926-2;Q12926;C9JB16 ELAVL3;ELAVL4;ELAVL2 ELAV-like protein;ELAV-like protein 3;ELAV-like protein 4;ELAV-like protein 2 no no 0 0 0 4.5 3.5 1 1 39.215 39.208 2 5.8001E-05 9725 20230619_1880_Aki_TMTPro18x_K_F1 186.33 138.59 133760 65265 169160 198050 217920 198700 154100 194560 156420 135220 219510 259650 183530 188730 223030 86081 242600 240200 123640 60909 169700 188790 220340 200610 159400 197490 161600 143550 221040 255220 190520 191590 226390 97255 231910 226520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 111100000 8185 3893;1058;945 7744 15563;15564 12497;12498 12497 2 9606 Homo sapiens -0.015762453134698262 FANSLVGVQQQLQAFNTYR Unmodified 2183.1124 0.112351 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 6.5 0.5 1 1 63.512 63.553 3 9.8208E-25 19459 20230619_1887_Aki_TMTPro18x_K_F7 203.89 188.3 57553 49847 52189 66757 62847 73356 70703 77553 84891 69592 74152 84523 84620 70308 88208 81988 81757 96837 53196 45763 53725 66090 64706 73743 71263 78710 85213 71224 77141 84633 86187 73634 89246 83052 78391 91763 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 800040000 8186 2337;3778;3779 7745 15565;15566 12499;12500 12500 2 9606 Homo sapiens 0.06811932003984111 FANYIDK Unmodified 869.42832 0.42831841 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5 VIM;HEL113 Vimentin yes no 0 0 0 4.8 2.79 1 1 1 1 1 52.869 52.92 2 0.0078468 14753 20230619_1888_Aki_TMTPro18x_K_F8 121.99 78.175 2397600 1861100 1845500 1608300 4486800 4994500 3380600 3312800 4191400 3083600 3152600 2930200 3310800 2711100 3246600 3281900 3208600 2823400 2212000 1702700 1959600 1689800 4424800 4755200 3494100 3490000 4181700 3128200 3289200 2975800 3370600 2833900 3300400 3263600 3067700 2687900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 9687500000 8187 3414 7746 15567;15568;15569;15570;15571 12501;12502;12503;12504 12504 4 9606 Homo sapiens -0.011618620566650861 FAPGLSCVTYAGDKEER Unmodified 1898.8833 0.88326227 951 Q86WJ1;Q86WJ1-2;Q86WJ1-4;X5D2E5;A0A494C1F7;A0A0A0MSH9;A0A494C1P7;A0A494C0B8;A0A494C0Q0;B4DPN5;A0A494C0J6;A0A494C0F0;A0A494C111;A0A494C1H0;A0A494C0M4;A0A494C1I3;A0A087WTM4 CHD1L Chromodomain-helicase-DNA-binding protein 1-like yes no 0 0 1 7 0 1 51.26 51.338 3 4.0391000000000003E-25 14167 20230619_1887_Aki_TMTPro18x_K_F7 218.28 204.99 87212 73989 82701 92445 90828 101130 104590 98803 106620 100870 107570 89057 97426 81786 112770 94072 93990 80199 80626 67883 84580 91951 94064 101550 104710 101160 108520 101480 109800 90758 100450 85249 113260 93641 90015 76371 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68594000 8188 951 7747 15572 12505 12505 1 9606 Homo sapiens -0.030224032843307214 FAPPLVIK Unmodified 883.55312 0.55312499 1194 A0A140VJQ4;P04181;P04181-2;Q59HE2 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes no 0 0 0 4 0 1 60.187 60.19 2 0.0055239 18383 20230619_1883_Aki_TMTPro18x_K_F4 113.25 63.213 97569 75129 88332 99367 70889 100560 101040 97536 137420 126220 144110 192020 171760 169430 143710 205360 217530 309980 90116 68995 90339 98354 76081 101460 101250 100680 138150 128080 149050 191130 173350 177440 151080 211380 208060 292970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67998000 8189 1194 7748 15573 12506 12506 1 9606 Homo sapiens 0.10669055150503937 FAQEAEAAR Unmodified 991.47231 0.47230849 3438 P12036-2;P12036 NEFH Neurofilament heavy polypeptide yes no 0 0 0 2.5 0.5 1 1 39.042 39.102 2 0.0029617 9361 20230619_1881_Aki_TMTPro18x_K_F2 101.54 70.47 173160 126730 168100 121220 65094 74187 86502 89528 106390 226690 263920 265950 269480 240940 229640 218020 315950 285610 159970 116060 169280 122500 76422 79097 86952 94137 113900 222730 263570 267170 273040 248190 238880 223310 301260 270660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 208680000 8190 3438 7749 15574;15575 12507 12507 1 9606 Homo sapiens -0.02376877630342733 FAQFFLCPLFDESCK Unmodified 1907.8586 0.85862742 1507 P14735;A0A7I2V610;A0A3B3ISG5;A0A7I2V2P6;A0A7I2V3E3;A0A7I2YQV5;A0A7I2V4Q3;A0A7I2V2S1;A0A7I2V612;A0A7I2V373;A0A7I2YQS6;A0A7I2V4A4;A0A7I2V634 IDE Insulin-degrading enzyme yes no 0 0 0 2.5 0.5 1 1 66.339 66.361 3 0.00020143 21098 20230619_1882_Aki_TMTPro18x_K_F3 92.939 82.743 10296 12051 14731 13879 11879 14865 14485 15430 14070 14949 14196 13070 17754 13493 15796 16616 14639 18516 9579.6 11037 14550 13886 12631 14968 14452 15707 14373 15074 14710 13378 17900 14085 16038 16750 14045 17552 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13149000 8191 1507 7750 15576;15577 12508 12508 1 9606 Homo sapiens -0.058987546914067934 FAQGSSLSFAAVDR Unmodified 1454.7154 0.7153923 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-5;Q13308-3;Q59FV9;Q86X91;B7Z471;F8WDG7;C9J9E8 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 1 0 1 55.229 55.229 3 6.4048E-07 16524 20230619_1880_Aki_TMTPro18x_K_F1 102.65 81.986 17464 14695 18540 19069 20039 20033 20144 19223 25454 18871 15064 16461 16277 14739 20485 19616 16827 18617 16160 13488 18767 18910 20687 20171 20462 19688 25210 19032 16019 16759 16783 15516 20550 19581 16147 17687 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28708000 8192 3847 7751 15578 12509 12509 1 9606 Homo sapiens 0.006223223040251469 FAQHGTFEYEYSQR Unmodified 1761.7747 0.7746981 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 5.5 0.5 1 1 44.432 44.515 3 1.1843000000000001E-57 11415 20230619_1885_Aki_TMTPro18x_K_F5 279.86 234.07 370630 290030 358830 435360 370790 503390 408160 395110 369760 432440 429850 405750 410340 359860 374640 422180 467490 498110 342520 266720 366260 428220 385800 500960 408310 412220 381590 434160 437220 411600 417860 376160 386980 427330 446600 472190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 788960000 8193 1450 7752 15579;15580 12510;12511 12510 2 9606 Homo sapiens -0.07571826472417342 FAQIVQK Unmodified 832.48069 0.48068833 4747 Q9Y5J9;G3XAN8 TIMM8B Mitochondrial import inner membrane translocase subunit Tim8 B yes no 0 0 0 3 0 1 50.978 51.049 2 0.026048 14631 20230619_1882_Aki_TMTPro18x_K_F3 103.29 33.854 296180 233000 267720 280520 336130 373290 295490 274000 343240 257450 309170 286850 314410 227780 250480 301160 299130 289810 273580 213760 275410 280540 342800 368170 301740 286420 345370 262210 318800 288070 317450 240930 258790 300680 285670 275420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50752000 8194 4747 7753 15581 12512 12512 1 9606 Homo sapiens 0.05774721076943479 FAQMLEK Unmodified 865.43677 0.4367746 3600 Q53GL5;P48735;P48735-2;Q13584;B4DSZ6 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] yes no 0 0 0 1 0 1 56.054 56.054 2 0.0060779 16834 20230619_1880_Aki_TMTPro18x_K_F1 135.84 57.346 141660 117450 123070 119220 144850 179480 169050 150870 187580 140400 140180 130120 152460 130830 156610 145420 165480 137690 130850 107560 126920 121110 149580 176250 169510 155810 188030 142290 146570 132650 155450 135700 159590 145520 158050 130960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208160000 8195 3600 7754 15582 12513 12513 1 9606 Homo sapiens -0.0013263141169090886 FAQPGSFEYEYAMR Oxidation (M) 1710.7348 0.73480712 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;H7C367;C9JYS8 NONO Non-POU domain-containing octamer-binding protein yes no 0 1 0 6.33 0.471 4 2 54.328 54.4 2;3 6.2715E-09 15692 20230619_1886_Aki_TMTPro18x_K_F6 157.33 135.24 376320 317830 348110 393810 384130 336350 380130 379890 363790 428390 426030 382320 426580 365200 400480 465930 417340 429190 347830 291580 356650 390750 395300 345780 383180 386470 374420 428750 433960 389880 434100 382600 409000 464370 399230 407990 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2215000000 8196 1112 7755 15583;15584;15585;15586;15587;15588 12514;12515;12516;12517;12518 12515 686 5 9606 Homo sapiens -0.0921308946735735 FAQPGSFEYEYAMR Unmodified 1694.7399 0.73989249 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;H7C367;C9JYS8 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 6 0.816 1 1 1 57.98 58.04 2 7.2069E-16 17286 20230619_1886_Aki_TMTPro18x_K_F6 202.05 186.51 294800 251060 311900 325800 241380 345740 327410 350110 347980 402790 356220 372980 435730 351980 355340 447960 408790 420760 272790 230420 314550 323150 259160 347960 325960 358680 354050 403210 368660 379280 438280 368940 366210 446820 390690 399880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1531499999.9999998 8197 1112 7755 15589;15590;15591 12519;12520 12519 2 9606 Homo sapiens -0.07968785604748518 FAQPGTFEFEYASR Unmodified 1648.7522 0.75217174 2614 B4DWI8;Q8WXF1;A0A024RDP4;Q8WXF1-2 PSPC1 Paraspeckle component 1 yes no 0 0 0 6.5 0.5 1 1 59.154 59.219 2 7.8662E-27 17467 20230619_1887_Aki_TMTPro18x_K_F7 210.44 189.57 34880 27274 32409 36343 29795 35992 37405 35642 36811 42716 39660 38863 45459 37042 39663 50671 43423 44238 32225 25047 33119 35946 31380 36403 37261 36633 37686 42664 40808 39585 45927 38993 40703 50307 41516 42083 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89831000 8198 2614 7756 15592;15593 12521;12522 12522 2 9606 Homo sapiens -0.046254258700400896 FAQSAPGSPLSSQPVLITVQR Unmodified 2182.1746 0.17461691 3780 Q01167-2;Q01167 FOXK2 Forkhead box protein K2 yes no 0 0 0 4.5 0.5 1 1 59.962 59.989 3 1.9256E-16 18354 20230619_1883_Aki_TMTPro18x_K_F4 156.51 142.83 19523 17376 18770 20408 19432 23422 21747 21950 30501 19085 20912 17505 20105 14155 20619 21668 21128 20400 18057 15929 19153 20401 20226 23418 22056 22448 30153 19417 21849 17753 20555 15123 20992 21578 20206 19392 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44811000 8199 3780 7757 15594;15595 12523 12523 1 9606 Homo sapiens 0.13081658352257364 FARPDFR Unmodified 907.46644 0.46643525 225 B4DZZ0;B3KQB4;A0A024R371;O75915;F8WF90;C9JQU6;F8WF33;B4DWQ6 ARL6IP5 PRA1 family protein 3 yes no 0 0 1 2 0.816 1 1 1 39.962 40.004 3 0.019271 9762 20230619_1881_Aki_TMTPro18x_K_F2 81.297 47.219 420350 365890 414110 506410 536620 520330 621820 639990 682790 452800 526240 509230 501870 464610 563570 464360 541370 559100 388790 336030 423640 499970 549350 527830 623620 640480 685000 469600 546340 513110 516210 480680 570210 472310 518310 529960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 400800000 8200 225 7758 15596;15597;15598 12524;12525 12524 2 9606 Homo sapiens 0.00900068648661545 FASEAEDK Unmodified 895.39233 0.39232683 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;Q9P2J5-3;Q9HAM7;Q9NPU8;B3KXA9 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 1.5 0.5 1 1 42.722 42.763 2 0.010214 11089 20230619_1881_Aki_TMTPro18x_K_F2 99.442 53.016 115990 66318 135900 151340 174940 195830 137390 173830 155280 124060 202030 242390 180030 182760 206010 99815 257220 223070 107210 61463 137060 146230 177610 193940 141440 177730 158860 131640 204460 238410 185900 186060 211220 108920 245380 210690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79802000 8201 1603 7759 15599;15600 12526 12526 1 9606 Homo sapiens -0.05955364024191567 FASEIAGVDDLGTTGR Unmodified 1607.7791 0.77911477 1339 E5KRK5;A0A291FIZ5;P28331-4;P28331;P28331-2;P28331-5;B4DJ81;P28331-3 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 3.67 0.471 1 2 58.376 58.388 2;3 1.2065E-18 17675 20230619_1883_Aki_TMTPro18x_K_F4 249.69 229.93 56966 59131 66802 71043 74723 81769 73192 79352 83787 68437 73132 67403 75219 60386 70343 76151 70097 66647 52838 54194 67187 70914 76923 81818 74237 80919 84301 69740 75592 68288 76446 63359 71633 75730 67047 63415 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 371130000 8202 1339 7760 15601;15602;15603 12527;12528 12528 2 9606 Homo sapiens -0.00046362049556591955 FASFIDK Unmodified 826.4225 0.42250475 2787;2803 CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;B4DRY0;CON__Q7RTS7;B4DRW1;B4DRR7;CON__Q32MB2;F8W1S1;B4DKJ0;Q0IIN1;CON__Q9R0H5;Q7Z794;P19013;CON__Q7Z794;Q86Y46;CON__P19013;Q7RTS7;H0YHD9;F8VS61;CON__Q3SY84;CON__Q14CN4-1;CON__Q6IME9;Q86Y46-2;Q14CN4-3;Q14CN4-2;Q14CN4;Q3SY84;CON__Q922U2;CON__Q5XQN5;B4E1T1;CON__P13647;P13647;CON__Q8BGZ7;CON__P50446;CON__P07744;CON__O95678;O95678 KRT2;KRT74;KRT77;KRT4;KRT73;KRT72;KRT71;KRT5;KRT75 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 4;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 72;Keratin, type II cytoskeletal 71;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 75 no no 0 0 0 1.8 0.748 2 2 1 60.58 60.59 2;3 0.016605 18814 20230619_1881_Aki_TMTPro18x_K_F2 76.847 23.292 + 606240 441320 471510 522720 268200 412510 435260 468790 91864 735660 615480 994440 1213300 1156500 236080 2128000 450970 1280000 559160 404920 487510 519910 299570 426660 419570 482390 137110 735890 634440 1005100 1173600 1236600 280160 2069300 435150 1221700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4944300000 8203 2787;2803 7761 15604;15605;15606;15607;15608 12529;12530;12531 12530 3 9606 Homo sapiens 0.002350394316749771 FASFIER Unmodified 868.4443 0.44430282 2388 B3KQI5;P07196;I6L9F6;B3KXJ0 NEFL Neurofilament light polypeptide no no 0 0 0 1 0 1 54.512 54.512 2 0.031165 16213 20230619_1880_Aki_TMTPro18x_K_F1 84.097 15.785 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8204 2388 7762 15609 12532 12532 1 9606 Homo sapiens 0.00481844180239932 FASGGCDNLIK Unmodified 1180.5547 0.55465791 3660 P55735-2;P55735;P55735-4;P55735-3;A8MXL6;Q59FA6;Q53GB2 SEC13 Protein SEC13 homolog yes no 0 0 0 7 0 1 51.228 51.305 2 0.00027238 14172 20230619_1887_Aki_TMTPro18x_K_F7 129.16 77.429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8205 3660 7763 15610 12533 12533 1 9606 Homo sapiens -0.028397236137152504 FASYLTFSPSEVK Unmodified 1474.7344 0.73439641 3654 P54886-2;P54886;A0A2Z4QJH0 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 2.5 0.5 1 1 62.676 62.696 3 0.0010921 19567 20230619_1882_Aki_TMTPro18x_K_F3 84.169 63.788 42634 48610 47271 36321 67833 82131 52066 59746 75756 48426 54383 49708 53339 46221 46077 59304 56167 67136 39554 44375 47883 38350 68502 79081 54145 62203 74913 49666 56710 50343 54153 48498 47617 59775 53719 63643 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 405260000 8206 3654 7764 15611;15612 12534 12534 1 9606 Homo sapiens 0.016018588750739582 FATDGEGYKPCDPQVIR Unmodified 1951.9098 0.90981137 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 1 5.5 0.5 1 1 49.079 49.156 3 1.0274E-06 13510 20230619_1886_Aki_TMTPro18x_K_F6 117.07 108.89 241810 183380 194440 215410 186490 213570 247350 258870 240790 290610 252110 249250 316950 257210 252540 358290 271460 283090 223130 168210 201500 214970 196070 217140 245710 262080 246470 290600 260940 255360 318280 270390 259580 353910 259630 269640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 967490000 8207 2337;3778;3779 7765 15613;15614 12535 12535 1 9606 Homo sapiens -0.02806714392977483 FATEAAITILR Unmodified 1204.6816 0.68157298 3470 P17987;E7EQR6;F5H282 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 1.67 0.471 1 2 61.588 61.595 2;3 2.8547E-06 19310 20230619_1881_Aki_TMTPro18x_K_F2 126.19 91.815 318820 252950 287460 288060 237620 269690 293330 280380 302230 344360 330360 346510 366040 288910 300350 363120 347230 384350 294510 231930 293860 287930 252350 274430 292920 287500 308770 344530 339260 349640 369190 304000 309510 364700 332030 364690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 207600000 8208 3470 7766 15615;15616;15617 12536;12537 12537 2 9606 Homo sapiens 0.08741945602923806 FATEFVAHGGVQK Unmodified 1389.7041 0.70409934 4735 Q9Y4B6-2;Q9Y4B6 VPRBP Protein VPRBP yes no 0 0 0 1 0 1 49.749 49.749 3 0.00010558 14252 20230619_1880_Aki_TMTPro18x_K_F1 100.19 66.778 38946 29464 36218 36347 32959 37011 35011 34592 43195 43037 47035 47057 47542 42672 39976 58045 55089 59292 35975 27041 36965 36156 34572 37324 35452 35741 43696 43171 48089 47469 48178 44965 41720 58091 52592 56287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22980000 8209 4735 7767 15618 12538 12538 1 9606 Homo sapiens 0.02483545000563936 FATEYCNTIEGTAK Unmodified 1603.7188 0.7188227 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;O00429-7;H0YI79;A0A994J6A0;A0A994J3G1;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 0 5.5 0.5 1 1 53.278 53.353 3 7.9223E-07 15324 20230619_1886_Aki_TMTPro18x_K_F6 129.54 117.37 88706 81405 89209 96026 79828 88148 104490 102870 106050 116600 115960 119790 141960 122590 97873 155070 138880 155100 82090 74624 90492 95707 84293 90090 103990 104460 108420 117180 119630 121620 142020 128080 102890 155130 132590 147250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 526620000 8210 3212;3213 7768 15619;15620 12539 12539 1 9606 Homo sapiens -0.058887957042998096 FATHAAALSVR Unmodified 1142.6196 0.61964142 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 3 0.816 1 1 1 40.604 40.662 3 1.81E-17 9888 20230619_1882_Aki_TMTPro18x_K_F3 211.64 190.18 386330 339800 346070 334690 426650 512710 427590 420120 537310 70600 65221 56596 52020 49254 167880 82099 65190 48837 357090 311050 356120 340940 437420 502770 434050 426200 520830 90605 88765 58238 59220 52717 162530 80396 63253 46798 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1276500000 8211 1450 7769 15621;15622;15623 12540 12540 1 9606 Homo sapiens 0.0540363897446241 FAVATLPPA Unmodified 885.496 0.49600404 3516 Q6IAT9;P28072 PSMB6 Proteasome subunit beta type;Proteasome subunit beta type-6 yes no 0 0 0 4.5 3.5 1 1 62.017 62.031 2 0.0066275 19353 20230619_1880_Aki_TMTPro18x_K_F1 91.26 73.224 147230 125650 133770 137780 119340 151840 144780 140070 163700 163120 156690 160480 177650 141150 153110 184790 178620 185700 136070 115140 136840 138380 125990 152200 145110 144540 165470 163550 162030 162400 179440 148610 157710 184940 170710 176350 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 168970000 8212 3516 7770 15624;15625 12541;12542;12543 12542 3 9606 Homo sapiens 0.04867587874127821 FAVFGLGNK Unmodified 951.5178 0.51780212 1810 P16435;Q59ED7;A8K3B4;B2R6E5;Q63HL4;A0A8V8NE24;A0A8V8P1G2;A0A8V8NLF0 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase yes no 0 0 0 5 0 1 61.459 61.507 3 0.0068292 18579 20230619_1885_Aki_TMTPro18x_K_F5 71.501 22.707 31549 30595 32849 35479 30698 40988 38699 32381 40843 33396 29882 29003 31892 25895 33357 38140 34157 31617 29216 28037 33258 35498 32318 40820 38603 33724 41037 33589 31270 29554 32555 27462 33964 37751 32656 30108 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86621000 8213 1810 7771 15626 12544 12544 1 9606 Homo sapiens 0.04010392622717518 FAVGSGAR Unmodified 763.39769 0.39768698 4304 V9HVZ6;Q92747;Q53GB6;A0A0K0K1L3;Q59GQ0;A0A1W2PNV4;Q92747-2;E9PF58;Q75MY0 HEL-68;ARPC1A Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 1 0 1 38.039 38.039 2 5.5142E-06 9218 20230619_1880_Aki_TMTPro18x_K_F1 152.39 110.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8214 4304 7772 15627 12545 12545 1 9606 Homo sapiens 0.006524043489434916 FAVLHGEAPR Unmodified 1095.5825 0.58252764 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q59FS8 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 7.5 0.5 1 1 41.488 41.522 3 3.2329E-07 10078 20230619_1888_Aki_TMTPro18x_K_F8 177.58 112.27 241270 185140 207560 224160 208660 242600 246350 226370 263950 277860 274150 240210 295260 233180 236370 313660 292420 270920 222750 169870 213790 223430 217830 243550 246730 233790 268430 276930 281450 245530 297790 245090 244910 311280 279090 257850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1142500000 8215 487 7773 15628;15629 12546;12547 12547 2 9606 Homo sapiens 0.03855967428717122 FAVSDGLELRPK Unmodified 1330.7245 0.72450043 2432 B3KWP3;Q9H2D1;E5RGK5;E5RFL3;E5RGT9 SLC25A32 Mitochondrial folate transporter/carrier yes no 0 0 1 1 0 1 52.877 52.877 3 0.00024759 15560 20230619_1880_Aki_TMTPro18x_K_F1 100.22 73.708 103300 91487 111370 104550 102050 118670 122300 122890 142030 141030 152220 169670 160720 131500 169710 184830 163260 189280 95630 83851 112300 104760 107320 119040 122790 125730 143980 142400 156230 169670 164150 139740 172150 185070 156450 179630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71335000 8216 2432 7774 15630 12548 12548 1 9606 Homo sapiens 0.07236715660337723 FAVYLPPK Unmodified 933.53239 0.53238955 1178 X6RA14;U3KQT1;A0A140VJJ2;P10768 ESD S-formylglutathione hydrolase yes no 0 0 0 4 0 1 59.308 59.311 3 0.030455 17989 20230619_1883_Aki_TMTPro18x_K_F4 56.011 33.925 47036 33067 41259 48596 44896 40281 41242 41160 51922 34735 40004 42828 45402 37238 42783 45219 42625 40089 43410 30415 42471 47670 46208 41396 42130 41851 51770 35727 41864 42939 46036 39008 43554 45025 40767 38140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84225000 8217 1178 7775 15631 12549 12549 1 9606 Homo sapiens 0.06296464770832699 FAWGHDELKPVSR Unmodified 1540.7787 0.77866126 1338 Q9UKM7;A0A291FGE6;A0A804HHU1;H0YG20;A0A804HL65;A0A804HK86;A0A804HJ66;A0A804HL61;B4DR05;A0A804HJ23;A0A804HKS1;A0A804HK01;H0YGQ1;H0YGV7;B4DPS9;A0A804HIP1;A0A804HJW0;A0A804HK28;Q68D80 MAN1B1;DKFZp686C04126 Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase;alpha-1,2-Mannosidase yes no 0 0 1 1 0 1 47.485 47.485 4 3.0775E-05 13336 20230619_1880_Aki_TMTPro18x_K_F1 119.96 116.39 38161 26559 32020 38661 31332 39710 41069 45634 46562 43159 44994 49984 49197 46421 48928 49667 53107 59909 35206 24427 33079 38050 32919 40180 41021 46133 47051 43955 46467 50305 50101 48167 49994 50431 50819 56768 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26427000 8218 1338 7776 15632 12550 12550 1 9606 Homo sapiens 0.029903078119104975 FAYVPFGAGR Unmodified 1083.5502 0.55016488 1779 B3KRC6;A0A8I5KWQ7;Q16850;H7C0D0;Q16850-2 CYP51A1 Lanosterol 14-alpha demethylase yes no 0 0 0 4.5 0.5 1 1 57.646 57.677 2 0.00088814 16946 20230619_1885_Aki_TMTPro18x_K_F5 115.69 97.925 116210 99519 99083 110270 79985 97331 99493 111140 118780 94035 95703 103590 73384 79981 151160 123070 122900 135910 107360 91197 101860 110360 85258 99729 99834 112130 118890 96244 98510 103980 79435 85496 150640 123770 117950 128900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72750000 8219 1779 7777 15633;15634 12551 12551 1 9606 Homo sapiens 0.01173180025716647 FCADHPFLFFIQHSK Unmodified 1892.9032 0.90320985 69 A0A2R8YD12;A0A024QZX3;A0A024QZX5;A0A087X1N8;P35237;A0A024QZT8;Q8IXH2 SERPINB6 Serpin B6 yes no 0 0 0 5 0 1 60.921 60.971 4 5.8594E-08 18339 20230619_1885_Aki_TMTPro18x_K_F5 139.66 121.74 52011 44016 51620 58405 48501 59114 51771 55261 60022 66649 60679 56133 64862 59993 70461 75953 60205 69967 48101 40409 52466 57793 50768 59616 52295 57019 60763 66430 62402 57629 66352 62584 71022 75720 57770 66482 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174730000 8220 69 7778 15635 12552 12552 1 9606 Homo sapiens -0.007525627630911913 FCADSDGFSQELR Unmodified 1530.6409 0.64090673 1656 A0A7I2V3A9;B2RAM6;P52732;Q59GZ5 KIF11 Kinesin-like protein;Kinesin-like protein KIF11 yes no 0 0 0 3 0 1 52.918 52.977 2 1.2418E-35 15483 20230619_1882_Aki_TMTPro18x_K_F3 272.94 229.63 43493 34834 37747 44431 23731 35651 37578 32277 39285 46308 40569 38115 49957 37363 33848 55371 41142 35003 40167 31973 38662 43957 26216 36622 37147 33620 40017 45797 41942 39065 49891 39515 35223 54153 39251 33485 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47419000 8221 1656 7779 15636 12553 12553 1 9606 Homo sapiens -0.10318808569650173 FCANTCVECR Unmodified 1315.5108 0.51076096 3865 Q13642-4;Q13642-5;Q13642-1;Q53FI7;B7Z5V0;B7Z9A1;B7Z6U8;Q5JXI8;Q13642;A0A494C0D6;Q5JXI3;Q5JXH8;Q5JXH7;Q5JXI2;A0A0D9SFZ9;Q5JXH9;A0A0D9SFB0;A0A0D9SFI6;Q13642-3;Q5JXI0;A0A0D9SGB2;A0A0D9SGD1;A0A494C0J3;A0A0D9SEY7 FHL1 Four and a half LIM domains protein 1 yes no 0 0 0 5.5 0.5 1 1 40.659 40.749 2 1.5367E-09 9854 20230619_1886_Aki_TMTPro18x_K_F6 205.83 185.5 182040 164160 153450 165190 140950 159180 182490 142670 217580 213540 225040 203040 221340 166330 191850 255500 274250 222750 168220 150280 158160 166750 148640 161170 182590 148940 219930 211750 230190 205500 224570 177570 200490 253280 261250 212100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 772240000 8222 3865 7780 15637;15638 12554 12554 1 9606 Homo sapiens -0.13437399373992776 FCCECGIR Unmodified 1100.4202 0.42015503 2270 B2R9B8;H0YAP0;Q96GY0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes no 0 0 0 5.5 0.5 1 1 41.203 41.293 2 0.0060118 10094 20230619_1886_Aki_TMTPro18x_K_F6 111.82 108.05 265530 189040 218700 231920 226200 268150 233980 212690 299540 243060 255650 244420 246370 218950 231090 281050 298970 244110 244970 173530 226250 231130 234960 267110 237450 222030 299530 244260 263870 247320 251190 229870 239260 279230 285020 232450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113180000 8223 2270 7781 15639;15640 12555;12556 12556 2 9606 Homo sapiens -0.1260382363161625 FCCEWEHR Unmodified 1222.4648 0.46479704 745 A0A024RD18;B2R6F9;Q15208 STK38 Serine/threonine-protein kinase 38 yes no 0 0 0 4 0 1 41.564 41.607 3 0.0033433 10257 20230619_1883_Aki_TMTPro18x_K_F4 96.311 89.458 45661 25253 43009 39770 46322 46381 43591 50536 55270 43245 53405 53571 52825 45280 49203 48907 51930 54569 42116 23275 43929 39058 47768 46482 44500 51121 55526 44420 54854 53648 53761 47172 50245 49412 49678 51760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34130000 8224 745 7782 15641 12557 12557 1 9606 Homo sapiens -0.1375367649391137 FCDNSSAIQGK Unmodified 1225.5397 0.53973612 2124 A8K9T9;A8K8N7;O15067 PFAS Phosphoribosylformylglycinamidine synthase yes no 0 0 0 6 0 1 45.508 45.594 2 0.00033213 11935 20230619_1886_Aki_TMTPro18x_K_F6 109.42 104.72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8225 2124 7783 15642 12558 12558 1 9606 Homo sapiens -0.06401215481719191 FCECDNFNCDR Unmodified 1535.5228 0.52278221 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348;H7C4N8 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 0 2 0 1 44.912 44.995 2 2.3784000000000002E-24 12148 20230619_1881_Aki_TMTPro18x_K_F2 208.6 207.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8226 1647 7784 15643 12559 12559 1 9606 Homo sapiens -0.22355827421461072 FCELLIHR Unmodified 1086.5644 0.56443473 4207 Q8IWZ3-6;Q8IWZ3-4;Q8IWZ3;E9PDP5;Q8TEF1;Q7Z586;H3BLS9;Q9NXF0;H7C2F5 ANKHD1;FLJ00246 Ankyrin repeat and KH domain-containing protein 1 yes no 0 0 0 1 0 1 51.335 51.335 3 2.1474E-09 14897 20230619_1880_Aki_TMTPro18x_K_F1 155.75 124.38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8227 4207 7785 15644 12560 12560 1 9606 Homo sapiens 0.024615091823079638 FCENTQAGEGR Unmodified 1267.5251 0.52514869 4310 Q92896;Q92896-3;Q92896-2;H3BM42 GLG1 Golgi apparatus protein 1 yes no 0 0 0 2 0 1 35.743 35.8 2 0.00073273 7981 20230619_1881_Aki_TMTPro18x_K_F2 123.11 103.32 18551 10742 22405 25272 52809 59132 43268 54198 55246 35153 41719 48410 49917 42248 38311 23123 57478 50733 17151 9960.3 22929 24733 52203 57057 44529 55122 55018 36983 43832 48280 50155 42811 40124 25146 54762 47919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57177000 8228 4310 7786 15645 12561 12561 1 9606 Homo sapiens -0.09791287629832368 FCFSNEFSTFTHK Unmodified 1650.7137 0.71367774 970 Q3B7W7;B4E2C1;A0A0A6YYA0;Q86XR7-2;Q9Y3B3-2;Q9Y3B3 TMED7;TMED7-TICAM2 Transmembrane emp24 domain-containing protein 7 yes no 0 0 0 2 0 1 60.063 60.075 3 1.0964E-16 18651 20230619_1881_Aki_TMTPro18x_K_F2 217.2 197.63 45523 44955 51328 49567 41389 49014 54655 56509 59896 54532 57859 53964 57542 50627 62291 60914 63341 74117 42193 41174 51506 49709 44141 49782 54522 57153 60615 55200 59440 54729 58978 52899 63312 61785 60669 70217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55448000 8229 970 7787 15646 12562 12562 1 9606 Homo sapiens -0.08565054776249781 FCFTPHTEEGCLSER Unmodified 1868.7822 0.78216801 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 4.5 1.12 1 1 1 1 47.583 47.653 3 2.5333E-42 13060 20230619_1882_Aki_TMTPro18x_K_F3 280.87 262.17 604500 472190 531090 538790 359360 430260 475850 487390 468730 678950 609600 610170 677410 556790 585320 834850 667350 713280 558240 432970 543020 537530 390350 444780 473340 499190 484540 673310 621800 621010 684730 590790 602770 826870 638040 678590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1633699999.9999998 8230 3606 7788 15647;15648;15649;15650 12563;12564;12565 12563 3 9606 Homo sapiens -0.11747178258679014 FCGMFCPVEGSSENK Unmodified 1747.7004 0.70041222 1284 A0A1C7CYX9;A9CQZ4 DPYSL2 yes no 0 0 0 6.5 0.5 1 1 58.088 58.149 3 1.4775E-10 17033 20230619_1887_Aki_TMTPro18x_K_F7 151.66 141.88 111120 100720 113660 122950 68018 82097 95452 95654 99866 124070 101290 98459 138760 95547 90046 151300 124910 128020 102830 92365 114610 121840 75037 86448 94883 97607 101720 123030 105430 101090 138000 101700 94686 149640 119190 121830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 163580000 8231 1284 7789 15651;15652 12566;12567 12567 2 9606 Homo sapiens -0.14352996942125174 FCHECGTK Unmodified 1037.4059 0.40588518 2270 B2R9B8;H0YAP0;Q96GY0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes no 0 0 0 5.5 0.5 1 1 33.971 34.037 3 0.00092635 7263 20230619_1886_Aki_TMTPro18x_K_F6 119.86 100.1 38161 9152.8 43317 46200 56342 60462 43896 48168 54376 37599 65295 71780 51438 57958 53204 22623 75157 72462 35170 8734.2 43779 43703 57149 59692 45336 49784 55138 39640 65914 70768 53131 58362 55103 26200 71679 68306 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30161000 8232 2270 7790 15653;15654 12568 12568 1 9606 Homo sapiens -0.11132152788241001 FCIQEIEK Unmodified 1065.5165 0.51648149 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9 RRP12 RRP12-like protein yes no 0 0 0 5.5 0.5 1 1 56.345 56.413 2 0.00072262 16415 20230619_1885_Aki_TMTPro18x_K_F5 133.23 79.763 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8233 2355 7791 15655;15656 12569;12570 12569 2 9606 Homo sapiens -0.013656095283749892 FCIWTESAFR Unmodified 1315.6019 0.60194245 3558 Q59GY2;P36578;B4DMJ6;H3BM89;B4DMJ2 RPL4 60S ribosomal protein L4 yes no 0 0 0 2.5 0.5 1 1 62.368 62.387 2 4.785799999999999E-19 19677 20230619_1881_Aki_TMTPro18x_K_F2 247.07 218.67 773080 641660 757680 538650 555580 745150 706780 684780 670870 694790 266030 262310 727830 314150 326880 797510 698190 641020 714790 586790 766710 556300 598000 736660 702930 703530 670910 688490 311950 288200 707740 349600 362470 783130 664040 610710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 807470000 8234 3558 7792 15657;15658 12571;12572 12571 2 9606 Homo sapiens -0.04323444342730909 FCLDNGAK Unmodified 923.4171 0.41710179 3374 V9HWF4;P00558;P00558-2;B4DHB3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 7 0.816 1 1 1 48.376 48.454 2 0.0013592 12870 20230619_1887_Aki_TMTPro18x_K_F7 143.89 75.402 726140 518110 676500 695080 708940 812870 701050 680310 871900 929930 933800 1079200 1003800 846520 853530 1165800 1114600 1070500 670520 476040 691910 688790 734250 809880 712780 710970 881620 930950 959060 1080700 1015300 897490 886700 1160100 1063600 1017900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 664680000 8235 3374 7793 15659;15660;15661 12573 12573 1 9606 Homo sapiens -0.04767007422447023 FCLICNYVSR Unmodified 1330.6162 0.61621231 3545 P35249;C9JZI1;P35249-2;C9J8M3 RFC4 Replication factor C subunit 4 yes no 0 0 0 5.5 0.5 1 1 59.639 59.697 2 0.0018096 17770 20230619_1885_Aki_TMTPro18x_K_F5 123.5 108.73 130300 113160 115160 113610 104630 140790 118250 119460 142560 75902 57998 46279 61923 52965 70128 67289 67131 51183 120420 103610 118100 115120 110160 139790 119170 122330 140310 78299 63613 48631 63512 55177 70979 66507 64149 48843 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58966000 8236 3545 7794 15662;15663 12574 12574 1 9606 Homo sapiens -0.03587115186064693 FCLQYTR Unmodified 986.46439 0.46438634 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 3 0 1 48.77 48.847 2 0.060956 13631 20230619_1882_Aki_TMTPro18x_K_F3 75.189 66.771 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8237 3152 7795 15664 12575 12575 1 9606 Homo sapiens -0.02938728151457326 FCLSKPGVYK Unmodified 1197.6216 0.62161526 1037;1668 A0A0G2JN29;Q15155;A0A0G2JP90;A0A7I2V4D7;A0A7I2V4T6;A0A7I2V6B0;J3KN36;Q5JPE7-2;P69849;Q5JPE7;A0A7I2V3P4;A0A7I2V2Z5;Q5JPE7-3;Q1LZN2 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 2;Nodal modulator 3 no no 0 0 1 5.5 0.5 1 1 51.466 51.542 3 0.019806 14585 20230619_1886_Aki_TMTPro18x_K_F6 65.627 43.754 218040 192010 216790 252060 229460 252510 250680 257360 249800 238070 263230 204250 208460 143640 300780 153880 167010 129000 201710 176230 220730 249570 237840 255390 251570 262070 254980 240520 266840 206880 218450 150860 296020 153610 160830 122930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83635000 8238 1037;1668 7796 15665;15666 12576 12576 1 9606 Homo sapiens 0.030709316680486154 FCNTEDEETMYLR Unmodified 1706.6916 0.69162167 2818 D3DSW1;Q9H5V9-2;Q9H5V9-3;Q9H5V9 hCG_1640171;CXorf56 UPF0428 protein CXorf56 yes no 0 0 0 2 0 1 52.9 52.933 2 8.4837E-21 15725 20230619_1881_Aki_TMTPro18x_K_F2 224.82 219.27 14470 12044 13540 14185 13156 15348 14171 16957 16274 19090 19409 18161 22059 17170 18412 22044 20395 22110 13375 11044 13830 14170 13734 15468 14308 17257 16601 19142 19871 18456 22244 18012 18917 22066 19506 20993 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12117000 8239 2818 7797 15667 12577 12577 1 9606 Homo sapiens -0.13345647306960018 FCNTVHDIVNR Unmodified 1373.651 0.65101791 3987 Q53F02;Q9UKF6;G5E9W3;Q05BZ5 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes no 0 0 0 8 0 1 45.42 45.448 3 1.5125E-24 11659 20230619_1888_Aki_TMTPro18x_K_F8 223.77 200.86 91846 68245 79791 91046 81924 93730 86949 80380 102940 106400 99058 100580 107680 90433 91750 120760 104710 111580 84787 62688 82155 90073 85139 94261 87870 83771 103870 105970 102190 102040 108880 95223 94459 120260 100110 106060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 303610000 8240 3987 7798 15668 12578 12578 1 9606 Homo sapiens -0.020861560537696278 FCNVDDDELR Unmodified 1281.5296 0.52956537 2126 A8K8U1;Q86VP6;Q86VP6-2;H0YH27;Q86VP6-3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 1 0 1 47.435 47.435 2 0.00047406 13332 20230619_1880_Aki_TMTPro18x_K_F1 123.79 114.93 26146 16832 20682 24569 28368 26044 23784 27818 32737 38298 31298 32883 50408 39827 27649 45641 59736 60148 24102 15487 21593 24187 28725 26273 24531 28556 32858 37982 32998 33867 49777 41214 30380 46517 56848 56974 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62628000 8241 2126 7799 15669 12579 12579 1 9606 Homo sapiens -0.09993823206946217 FCPFAER Unmodified 925.41162 0.41162248 2269 V9HWG9;B2R983;P78417;Q5TA02;P78417-3;P78417-2;Q5TA01 HEL-S-21;GSTO1 Glutathione S-transferase omega-1 yes no 0 0 0 8 0 1 49.32 49.392 2 0.016144 13243 20230619_1888_Aki_TMTPro18x_K_F8 110.34 79.619 183870 143880 140750 158550 127160 181590 182170 166120 220400 183230 145230 154880 216070 148560 172180 205850 177010 172140 169640 131890 146540 159240 135120 181450 181550 171260 219380 183520 155700 158320 215980 156620 176300 203950 169280 163870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197660000 8242 2269 7800 15670 12580 12580 1 9606 Homo sapiens -0.0540668621426903 FCPSGAWELPGTPR Unmodified 1573.7347 0.73474754 4276 Q8WUA4;Q53QN0;Q8WUA4-2 GTF3C2 General transcription factor 3C polypeptide 2 yes no 0 0 0 2 0 1 59.847 59.86 2 1.6738E-06 18594 20230619_1881_Aki_TMTPro18x_K_F2 160.15 142.68 24644 19593 20865 21854 19016 23990 24155 23180 24906 25278 29848 26903 28376 20065 26300 30133 29726 29230 22754 17961 21493 21920 20066 24076 24086 23797 25519 25477 30306 27029 28881 21472 26991 30054 28405 27774 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19943000 8243 4276 7801 15671 12581 12581 1 9606 Homo sapiens -0.0291704467672389 FCPTENVAK Unmodified 1064.4961 0.4960804 1879 A0A994J5K1;Q5SXN9;Q10713;Q10713-2 PMPCA Mitochondrial-processing peptidase subunit alpha yes no 0 0 0 6.5 0.5 1 1 46.34 46.427 2;3 7.908E-06 11955 20230619_1887_Aki_TMTPro18x_K_F7 177.97 94.22 45837 38845 45452 51775 49463 48489 50914 53262 61042 64864 76804 66647 71536 54491 59644 81119 85312 76083 42391 35663 46294 51176 51062 49405 51588 54393 62240 64967 77737 67240 72590 58040 62392 80735 81314 72351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46570000 8244 1879 7802 15672;15673 12582;12583 12583 2 9606 Homo sapiens -0.03358780188182209 FCSDCIVTALR Unmodified 1340.6217 0.62169161 1303 B4DVB5;A0A1U9X8F2;A0A1U9X8F1;Q06587;A0A024RCR9;Q06587-2 RING1 E3 ubiquitin-protein ligase RING1 yes no 0 0 0 1 0 1 56.564 56.564 2 3.4051E-06 17077 20230619_1880_Aki_TMTPro18x_K_F1 162.34 141.37 148570 118870 127890 131840 109470 146280 145990 142520 163580 158700 157460 139760 164250 137830 142600 172170 161430 160490 137200 108960 131420 132330 116410 146710 145640 146280 165400 158970 162010 142780 166390 144070 146590 171720 154270 152560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91186000 8245 1303 7803 15674 12584 12584 1 9606 Homo sapiens -0.03499436394258737 FCSGSWDK Unmodified 985.39637 0.39636635 4009 Q9GZL7;Q53T99;B4DRY7 WDR12 Ribosome biogenesis protein WDR12 yes no 0 0 0 7.33 0.471 2 1 49.95 50.029 2 0.0010386 13605 20230619_1887_Aki_TMTPro18x_K_F7 150.4 115.3 198440 156380 184630 192600 213110 245640 220910 222430 245140 255340 242070 239500 273510 201440 226700 237080 271430 247790 183340 143490 189200 192220 219440 243810 223050 229650 248420 255790 249840 242500 275740 211120 233850 238250 259100 235320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 172260000 8246 4009 7804 15675;15676;15677 12585;12586;12587 12585 3 9606 Homo sapiens -0.09691597802122942 FCSLPEK Unmodified 879.41604 0.41603916 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 7 0 1 49.29 49.374 2 0.0068808 13286 20230619_1887_Aki_TMTPro18x_K_F7 138.33 104.48 177810 141730 150280 156410 182930 190190 177220 179530 209340 198460 195400 179500 209160 168000 178030 226180 234080 192950 164180 129910 155460 157250 187290 189590 180010 184590 210950 199020 201610 182830 211560 176770 184930 224360 223140 183770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278410000 8247 1552 7805 15678 12588 12588 1 9606 Homo sapiens -0.028492217913594686 FCTGLTQIETLFK Unmodified 1556.7909 0.79086543 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 0 2.5 0.5 1 1 64.92 64.94 3 1.1048E-15 20495 20230619_1882_Aki_TMTPro18x_K_F3 204.32 188.5 638260 630690 689560 701300 432010 523160 589160 585130 544830 858610 852360 875760 938590 830420 824010 932880 936670 1059900 591340 577690 692380 700500 473320 544230 584370 601140 571060 852950 864010 886540 949880 863650 846770 942590 895970 1004900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2681400000 8248 3441 7806 15679;15680 12589;12590;12591 12590 3 9606 Homo sapiens 0.034741634400916155 FCTSAADMK Unmodified 1029.426 0.42595192 2519 B4DKV8;Q8NFH4;F8VTY2 NUP37 Nucleoporin Nup37 yes no 0 0 0 6 0 1 47.345 47.426 2 0.0041998 12767 20230619_1886_Aki_TMTPro18x_K_F6 91.867 69.037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8249 2519 7807 15681 12592 12592 1 9606 Homo sapiens -0.08758401848285757 FCVDYAK Unmodified 901.40039 0.4003891 3615 P49916-3;P49916;P49916-4;P49916-2;K7ERZ5;K7ENR9;Q96DF0 LIG3 DNA ligase 3 yes no 0 0 0 7 0 1 50.929 51.007 2 0.052424 14039 20230619_1887_Aki_TMTPro18x_K_F7 77.741 45.805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8250 3615 7808 15682 12593 12593 1 9606 Homo sapiens -0.05425508308405824 FCVSCAR Unmodified 898.37894 0.37894215 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;A0A7I2V311;A0A7I2V5F6 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 1.5 0.5 1 1 40.139 40.174 2 0.009912 9896 20230619_1881_Aki_TMTPro18x_K_F2 118.69 101.76 95677 81987 91876 86747 95444 114120 92313 100670 131730 90077 77836 81375 76961 64884 83181 83864 107230 74522 88467 75101 93670 87622 98928 113020 94479 103440 129730 91425 82394 82427 78933 68474 85789 83455 102130 71000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91616000 8251 442 7809 15683;15684 12594 12594 1 9606 Homo sapiens -0.07431216608779323 FCVTWNTNSR Unmodified 1283.5717 0.57170495 3820 Q12788;A0JLS5;J3KNP2 TBL3 Transducin beta-like protein 3 yes no 0 0 0 4 0 1 52.19 52.213 2 1.0217E-06 14994 20230619_1883_Aki_TMTPro18x_K_F4 179.37 159.09 70859 66543 64834 69043 66582 78826 79379 73619 88593 81045 81734 78240 86182 65642 75544 86300 86926 85210 65536 60924 66428 69681 69422 78866 79560 75779 89447 81440 84349 79149 87271 69260 77692 86297 83048 80951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56664000 8252 3820 7810 15685 12595 12595 1 9606 Homo sapiens -0.05873803007921197 FCYGQCNSFYIPR Unmodified 1710.7283 0.72828195 1985 B3KTR9;A6XAA7;O60565-2;O60565;Q9H772 GREM1;GREM2 Gremlin;Gremlin-1;Gremlin-2 yes no 0 0 0 4.5 0.5 1 1 57.841 57.872 2 4.7959E-08 17439 20230619_1883_Aki_TMTPro18x_K_F4 177.44 162.98 97507 86486 105840 118160 84053 94655 107270 109000 114900 163970 140150 150390 163630 131880 138120 183690 168960 166560 90273 79411 106580 116410 89635 97827 107120 111850 117890 162240 143700 152620 165020 139410 142850 182660 161350 158390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56704000 8253 1985 7811 15686;15687 12596;12597 12596 2 9606 Homo sapiens -0.09865305899734267 FDAERPVDCSVIVVNK Unmodified 1846.9247 0.92473315 4550 Q9HCD5;Q5JY17 NCOA5 Nuclear receptor coactivator 5 yes no 0 0 1 6.5 0.5 1 1 52.91 52.984 3 9.4853E-06 15189 20230619_1886_Aki_TMTPro18x_K_F6 108.56 68.378 183860 167990 191420 179990 167500 184310 186680 184290 203190 204820 210750 188400 232560 195630 185800 266420 241630 261700 170190 153870 193370 180970 176370 186130 187720 188830 206430 205420 216640 192490 234480 205340 193300 266050 230780 248540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92687000 8254 4550 7812 15688;15689 12598 12598 1 9606 Homo sapiens 0.03514777474993025 FDAEVSQWK Unmodified 1108.5189 0.51892433 3613 P49792;A0A8V8TLN4;A0A8V8TMN6;A6NKT7;J3KNE0 RANBP2;RGPD3 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3 yes no 0 0 0 6 0 1 56.989 57.061 3 0.00077166 16904 20230619_1886_Aki_TMTPro18x_K_F6 103.7 67.756 62921 56305 63042 64948 62857 70290 69756 68752 68255 72169 72898 74021 80012 61839 71914 74824 75858 73152 58216 51608 64042 64969 65476 70649 69908 70440 69843 72790 74902 74643 81004 64903 73501 74887 72523 69508 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55171000 8255 3613 7813 15690 12599 12599 1 9606 Homo sapiens -0.030994377990509747 FDAGELITQR Unmodified 1148.5826 0.58258722 2035 Q6FHP5;A8K401;P35232;Q6PUJ7;Q53FV0;C9JZ20;C9JW96;E7ESE2;E9PCW0;Q9BSE8 PHB;HEL-S-54e;ZNF607 Prohibitin yes no 0 0 0 5.25 0.829 1 1 2 54.037 54.097 2;3 9.5738E-05 15797 20230619_1883_Aki_TMTPro18x_K_F4 163.16 137.22 611060 507700 524950 601900 595260 723430 725270 717670 800970 664100 645000 659750 747180 607140 695700 691750 662810 706040 564430 465590 542160 601730 616950 722000 725790 732030 805230 674150 673810 668210 756680 632690 706500 694670 634790 670290 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3401799999.9999995 8256 2035 7814 15691;15692;15693;15694 12600;12601;12602;12603 12600 4 9606 Homo sapiens 0.014239226380368564 FDAMPFTLR Oxidation (M) 1112.5325 0.5324659 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2 PA2G4 Proliferation-associated protein 2G4 yes no 0 1 0 1 0 1 56.564 56.564 2 0.012183 17071 20230619_1880_Aki_TMTPro18x_K_F1 74.301 62.933 113240 91244 94550 107020 110740 114150 109280 116520 126930 105670 119810 97964 105190 84572 108870 128400 111010 110370 104560 83677 97905 106900 113720 114980 110840 118560 127950 107170 122480 99512 107970 90001 110880 127260 106190 105020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90937000 8257 654 7815 15695 12604 12604 395 1 9606 Homo sapiens -0.01929903291465962 FDAMPFTLR Unmodified 1096.5376 0.53755128 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 1.5 0.5 1 1 61.962 61.967 2 4.4142E-05 19487 20230619_1881_Aki_TMTPro18x_K_F2 164.71 134.64 477820 380570 448600 417870 317670 475690 434970 450450 457250 401130 398160 351770 459130 379030 477240 508400 399210 396980 441530 348810 456110 419960 344510 475820 432700 460530 462060 406700 413840 360810 467370 396850 480850 502530 382700 378250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 621410000 8258 654 7815 15696;15697 12605 12605 1 9606 Homo sapiens -0.006855994288343936 FDAPEDSHLEK Unmodified 1286.5779 0.57789577 3117 I6L976;Q5VUM1 C6orf57;SDHAF4 Succinate dehydrogenase assembly factor 4, mitochondrial yes no 0 0 0 2 0 1 44.679 44.762 3 3.1576E-07 12041 20230619_1881_Aki_TMTPro18x_K_F2 124.86 91.632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8259 3117 7816 15698 12606 12606 1 9606 Homo sapiens -0.053930062953895685 FDASFFGVHPK Unmodified 1250.6084 0.60840804 3606 P49327;A0A0U1RQF0;A0A0U1RRG3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 2.75 0.829 2 1 1 57.66 57.676 3 2.9844E-06 17599 20230619_1881_Aki_TMTPro18x_K_F2 146.16 110.75 608230 527420 590610 569900 395640 480070 489660 516470 507390 731810 693200 666440 741400 614740 635550 812070 664710 732910 562490 483190 598310 571300 429260 493330 489510 530910 524310 725580 704350 677910 749890 646300 650770 807940 636180 696710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1457899999.9999998 8260 3606 7817 15699;15700;15701;15702 12607;12608;12609 12607 3 9606 Homo sapiens -0.0068718311968041235 FDAVIGYK Unmodified 911.47527 0.4752686 2846 D6RCD0;Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes no 0 0 0 8 0 1 57.376 57.428 3 0.011244 16784 20230619_1888_Aki_TMTPro18x_K_F8 72.485 47.562 58696 50038 60896 67551 57671 64655 65539 71637 69240 76479 72361 71389 78714 72306 79563 83563 75045 70645 54305 45945 61671 66737 60363 65747 65778 72817 70510 76857 74390 72752 80202 75111 80662 83074 71815 67252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24578000 8261 2846 7818 15703 12610 12610 1 9606 Homo sapiens 0.015989974944773166 FDAYFHQK Unmodified 1054.4872 0.48723027 335 A0A024R5E0;P35790-2;P35790 CHKA Choline kinase alpha yes no 0 0 0 1 0 1 49.445 49.445 3 0.0024905 14135 20230619_1880_Aki_TMTPro18x_K_F1 103.56 82.662 29714 29904 29265 30729 25165 27653 34733 27461 36368 32870 31252 27696 35851 27610 29659 44843 39676 30207 27512 27371 29718 30944 26713 28213 34499 28240 36748 32786 32482 28393 36146 29389 30902 43921 37799 28881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15765000 8262 335 7819 15704 12611 12611 1 9606 Homo sapiens -0.03783385762335456 FDCHYCR Unmodified 1056.3906 0.39056947 3865 Q13642-4;Q13642-5;Q13642-1;Q53FI7;B7Z4B7;B7Z5V0;B7Z9A1;B7Z5T3;B3KRI9;Q5JXI8;Q13642;A0A494C0D6;Q5JXI3;Q5JXH8;Q5JXH7;Q5JXI2;A0A0D9SFZ9;Q5JXH9;A0A0D9SFB0;A0A0D9SFI6;Q13642-3;Q5JXI0;A0A0D9SGB2;A0A0D9SGD1;A0A494C0J3;A0A0D9SEY7;A0A494C1G1;A0A0D9SGC5 FHL1 Four and a half LIM domains protein 1 yes no 0 0 0 6 0.816 1 1 1 34.313 34.383 3 0.0025473 7317 20230619_1885_Aki_TMTPro18x_K_F5 119.89 118.1 483610 316630 493790 507970 549790 569980 520910 580910 675060 436750 597430 576680 500450 488860 521900 405650 628440 523570 446700 291650 501610 497900 565800 571690 531850 588760 674820 453750 612240 576130 515420 502550 535490 416080 599530 496430 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 474970000 8263 3865 7820 15705;15706;15707 12612;12613;12614 12612 3 9606 Homo sapiens -0.13537019585442067 FDCHYCRDPLQGK Unmodified 1694.7293 0.72934458 3865 Q13642-4;Q13642-5;Q13642-1;Q53FI7;B7Z4B7;B7Z5V0;B7Z9A1;B7Z5T3;B3KRI9;Q5JXI8;Q13642;A0A494C0D6;Q5JXI3;Q5JXH8;Q5JXH7;Q5JXI2;A0A0D9SFZ9;Q5JXH9;A0A0D9SFB0;A0A0D9SFI6;Q13642-3;Q5JXI0;A0A0D9SGB2;A0A0D9SGD1;A0A494C0J3;A0A0D9SEY7;A0A494C1G1;A0A0D9SGC5 FHL1 Four and a half LIM domains protein 1 yes no 0 0 1 7.5 0.5 1 1 43.569 43.614 4 4.3741E-08 10962 20230619_1888_Aki_TMTPro18x_K_F8 165.51 148.43 352940 366980 368880 340290 465350 298880 350260 344770 374550 394220 407040 355200 410980 394380 385750 467850 490210 443730 327030 335580 374310 345780 470890 307360 360790 350430 381860 394580 415950 364060 418550 409230 398900 467390 467700 421880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 354300000 8264 3865 7821 15708;15709 12615;12616 12616 2 9606 Homo sapiens -0.09023091530843885 FDDAVVQSDMK Oxidation (M) 1269.5547 0.55471749 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;E9PNE6;P11142-2;Q53HF2;E9PN89;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PPY6;E9PN25;A4D111;E9PK54 HSPA8;HEL-S-72p;LOC401308 Heat shock cognate 71 kDa protein no no 0 1 0 2.5 0.5 1 1 48.725 48.797 3 0.0080237 13881 20230619_1881_Aki_TMTPro18x_K_F2 67.456 53.794 72545 58243 70099 80408 73821 83636 78505 83341 84494 88362 97477 78234 86232 71308 90696 91585 73515 76408 67054 53504 71533 79399 76529 84298 79106 85281 86262 88709 98794 79733 88527 74853 91211 90869 70524 72723 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 592300000 8265 3430;2926 7822 15710;15711 12617 12617 1740 1 9606 Homo sapiens -0.06927768404375456 FDDDVVSR Unmodified 951.42977 0.42977497 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8;F5H2X1;B7Z842 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 1.5 0.5 1 1 43.807 43.848 2 7.5308E-05 11779 20230619_1880_Aki_TMTPro18x_K_F1 183.9 142.87 294160 242090 284110 299480 314880 359780 315580 337830 381040 358320 408140 397100 398250 364060 366260 371260 446800 420560 271930 222110 290010 298520 324860 358700 320300 347100 385480 362280 416940 400270 405480 376950 377450 375760 426530 399030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 223450000 8266 1601 7823 15712;15713 12618 12618 1 9606 Homo sapiens -0.047882727585715656 FDDGAGGDNEVQR Unmodified 1378.5749 0.57493566 1235 C9JX88;A0A140VK70;P35998;Q75L23;P35998-2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 1 0 1 39.255 39.255 2 1.9545E-27 9729 20230619_1880_Aki_TMTPro18x_K_F1 248.05 218.58 139370 94612 102800 129910 160000 170020 152580 149360 204200 159500 164730 156850 178280 143520 135040 173970 189340 147540 128460 86969 108500 128730 161600 168380 155760 154250 203440 160700 171340 158960 179490 150100 141270 172760 180350 140560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 317010000 8267 1235 7824 15714 12619 12619 1 9606 Homo sapiens -0.09920881420202932 FDDKPDYSYLR Unmodified 1417.6514 0.65139506 2398;544 Q5U045;Q53EZ1;B3KRV2;P49674;H0Y645;B0QY35;B0QY34;A0A669KBC0;H7C3J2;H7C0Y5;B4E0G1;A0A024R8X3;H7BYT1;P48730-2;P48730;B4DIJ9;Q59FJ7 CSNK1E;CSNK1D Casein kinase I isoform epsilon;Casein kinase I isoform delta no no 0 0 1 6 0 1 50.271 50.348 3 3.4598E-05 14024 20230619_1886_Aki_TMTPro18x_K_F6 118.76 85.811 273420 218690 251440 292140 237220 297100 281710 287650 319560 377080 349860 324980 397570 337060 300340 410210 355210 376040 252620 200830 257330 288970 249080 299720 282720 296880 324980 374670 359350 332810 399630 351190 310760 408820 339480 357450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131410000 8268 2398;544 7825 15715 12620 12620 1 9606 Homo sapiens -0.040724578529079736 FDDKYTLK Unmodified 1028.5179 0.51786169 2451 B4DDB9;E9PI68;Q15005;E9PL01;E9PRB9 SPCS2 Signal peptidase complex subunit 2 yes no 0 0 1 8 0 1 49.456 49.528 3 0.070595 13312 20230619_1888_Aki_TMTPro18x_K_F8 55.37 39.798 185020 167160 230280 195560 245750 232880 255970 223270 209100 181200 223970 101810 105160 78660 284440 83697 80984 77585 171540 153230 230150 195780 253700 232570 256080 227660 216040 182970 223410 106490 119280 82297 273760 84351 79428 73768 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64470000 8269 2451 7826 15716 12621 12621 1 9606 Homo sapiens 0.004743478320278882 FDDPGLMLMGFK Unmodified 1369.641 0.64103007 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 8 0 1 65.042 65.062 3 0.0068468 19983 20230619_1888_Aki_TMTPro18x_K_F8 69.451 52.372 19028 18544 21048 22743 15893 24304 22104 21175 30505 28451 24368 29428 36575 31080 29744 35974 35327 44250 17631 17003 21156 22641 17145 24371 22184 22049 30370 28412 25857 29876 36626 32282 30710 36512 33809 41909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16643000 8270 150 7827 15717 12622 12622 1 9606 Homo sapiens -0.02900480103380687 FDDPLLGPR Unmodified 1028.5291 0.52909508 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB3;Q9H8E3;Q9P2J5-3;Q9HAM7;Q9NPU8;B3KXA9 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 4 0 1 55.883 55.891 2 0.0001184 16580 20230619_1883_Aki_TMTPro18x_K_F4 152.63 101.75 260080 227980 247420 272770 227550 261100 266180 247350 296020 299130 282720 295250 311430 269640 324080 331280 309940 335800 240500 209050 252260 271650 239090 264630 267090 255160 299480 299450 292150 299020 317560 282250 328590 332160 296870 318800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 609520000 8271 1603 7828 15718 12623 12623 1 9606 Homo sapiens 0.01597169926208153 FDDTNPEK Unmodified 964.41379 0.41379055 3402;2024;1277 A0A1B0GVU9;Q9H3A5;Q9BUZ3;B4DDN1;Q96AW5;A0A0U1RR66;P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5;Q53HS0;A8K3A8;P47897-2;P47897;B4DNN3;A0A0U1RQT0 QARS;EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase;Glutamine--tRNA ligase no no 0 0 0 2 0.816 1 1 1 43.083 43.132 2 0.00010061 11246 20230619_1881_Aki_TMTPro18x_K_F2 180.34 135.7 172820 92055 214590 217560 290740 321430 222050 283320 261620 204540 315920 396540 300500 299490 324100 146120 375300 387770 159770 85405 215650 210490 294070 315970 229350 289810 266180 216800 321530 390010 308590 304050 330950 163450 358670 365700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 209720000 8272 1277;3402;2024 7829 15719;15720;15721 12624;12625 12624 2 9606 Homo sapiens -0.06983978995469897 FDDVTSEDTR Unmodified 1183.4993 0.4993111 2496 I3L1L6;B4DIS6;Q9H6R0 DHX33 Putative ATP-dependent RNA helicase DHX33 yes no 0 0 0 1 0 1 42.728 42.728 2 1.7764E-06 11308 20230619_1880_Aki_TMTPro18x_K_F1 169.92 144.52 54387 39079 48162 54051 57040 63240 62634 58122 82677 62693 65684 70092 76375 58910 65058 76449 79827 76358 50204 35917 49618 53455 58743 63119 63409 59867 82362 63389 68680 70450 77055 62087 67229 76503 76211 72539 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37977000 8273 2496 7830 15722 12626 12626 1 9606 Homo sapiens -0.08509858600473308 FDECVLDK Unmodified 1024.4535 0.45354688 3629 P51970;B7Z768 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes no 0 0 0 4 0 1 53.872 53.888 2 0.016074 15753 20230619_1883_Aki_TMTPro18x_K_F4 84.476 51.635 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8274 3629 7831 15723 12627 12627 1 9606 Homo sapiens -0.057701753164110414 FDEHDGPVR Unmodified 1070.4781 0.47812215 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ITV3;A0A3B3ISK1;A0A3B3IS23;A0A3B3ITX2 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 1 0 1 35.076 35.076 3 4.449E-05 8033 20230619_1880_Aki_TMTPro18x_K_F1 146.27 129.04 24351 14060 21293 25249 23820 27174 23372 27677 39015 30666 36981 48253 41629 39831 25701 48971 54031 61496 22452 12979 21946 24584 24577 27323 24082 28317 38750 31383 38288 47891 41649 41833 28109 49685 51475 58249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15588000 8275 3647 7832 15724 12628 12628 1 9606 Homo sapiens -0.054297791186627364 FDEISFVNFAR Unmodified 1343.651 0.65100113 315 A0A024R4Z6;Q08945 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 7.67 0.471 1 2 63.185 63.211 2;3 6.7582E-12 19179 20230619_1888_Aki_TMTPro18x_K_F8 238.51 150.48 638770 513470 570840 600560 531190 665530 609260 597510 704070 703110 672540 715410 700140 637580 723850 795380 700290 803400 590060 470880 585180 600270 557890 666410 612820 618010 710870 705390 693190 723010 715090 668440 734790 796990 670970 762610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 957080000 8276 315 7833 15725;15726;15727 12629;12630 12630 2 9606 Homo sapiens -0.007078327821091079 FDELYHLK Unmodified 1063.5338 0.53384611 985 F8WF49;A0A0B4J2C2;Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0 DLGAP4 Disks large-associated protein 4 yes no 0 0 0 7 0 1 55.389 55.45 3 0.00090618 15927 20230619_1887_Aki_TMTPro18x_K_F7 120.07 52.511 39065 33285 38002 51407 35160 54772 46156 43305 58511 55729 59403 69756 59604 56791 57935 60653 64784 73829 36123 30611 38755 50413 37187 54805 46273 45397 58928 56100 60987 69687 60794 59196 59337 61621 61982 69950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96965000 8277 985 7834 15728 12631 12631 1 9606 Homo sapiens 0.004620540689302288 FDETEQALANER Unmodified 1421.6423 0.64228694 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 1 0 1 48.8 48.8 2 3.0353E-13 13860 20230619_1880_Aki_TMTPro18x_K_F1 214.26 180.38 71950 52321 66499 80200 70604 107390 86374 86299 126900 104970 103050 124360 126340 120940 86065 156820 138740 161390 66443 48143 68200 78982 73755 105920 87383 90112 125990 105780 107950 125270 126460 126690 91534 157030 132390 153160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108210000 8278 1002 7835 15729 12632 12632 1 9606 Homo sapiens -0.05166851209287415 FDFLCQYHK Unmodified 1256.5648 0.56482866 3129 J3KQ32;Q9NTK5;B4DK14;Q9NTK5-3;C9JTK6;Q53SW9 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 0 2 0 1 56.467 56.485 3 0.00025869 17180 20230619_1881_Aki_TMTPro18x_K_F2 120.68 107.7 389740 281840 303650 372510 278510 409390 345110 358210 455570 310780 270730 234550 266510 219930 304630 285870 283780 239590 359460 258900 315770 369050 294300 409650 347430 368200 450080 314660 286140 241230 273980 230870 307830 283720 271410 228220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253540000 8279 3129 7836 15730 12633 12633 1 9606 Homo sapiens -0.05319115888482884 FDFQAQSPK Unmodified 1066.5084 0.50835964 2603 B4DVR4;O60504-2;O60504;E5RJP2;E5RIA0 SORBS3 Vinexin yes no 0 0 0 8 0 1 51.506 51.583 2 0.044727 14201 20230619_1888_Aki_TMTPro18x_K_F8 64.654 42.506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8280 2603 7837 15731 12634 12634 1 9606 Homo sapiens -0.022234204534925084 FDGILGMAYPR Unmodified 1238.6118 0.61177885 1270 F8W787;A0A1B0GW44;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;V9HWI3;C9JH19;P07339;A0A1B0GVP3;A0A1B0GU92;A0A1B0GU03;H7C469;F8WD96 CTSD;HEL-S-130P Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 0 0 0 2.5 0.5 1 1 62.592 62.612 2 1.5462E-08 19504 20230619_1882_Aki_TMTPro18x_K_F3 186.25 172.67 117720 101350 103530 133920 129230 161620 184000 190380 205170 141300 134360 125350 131790 109310 142220 144800 144270 139230 108780 93037 107010 132910 133830 161880 182850 191100 204760 145000 141060 127530 135110 115190 144560 144630 137980 132320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107080000 8281 1270 7838 15732;15733 12635 12635 1 9606 Homo sapiens 0.0020174366268292943 FDGILTEGEGPR Unmodified 1289.6252 0.62518031 4359 Q96HE7 ERO1L ERO1-like protein alpha yes yes 0 0 0 2.5 0.5 1 1 54.893 54.929 2;3 1.6481E-09 16305 20230619_1882_Aki_TMTPro18x_K_F3 184.9 159.34 158320 136020 138770 158850 145140 166700 176380 164360 186190 197660 197670 203940 217940 195790 188020 242830 219760 229860 146290 124700 142840 158660 151170 167930 176300 169010 189670 198170 203190 206530 220460 204660 193780 242380 210020 218420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97356000 8282 4359 7839 15734;15735 12636;12637 12637 2 9606 Homo sapiens -0.008047270243878302 FDGILTEGEGPRR Unmodified 1445.7263 0.72629134 4359 Q96HE7 ERO1L ERO1-like protein alpha yes yes 0 0 1 4.5 0.5 1 1 48.013 48.071 3 7.5291E-11 13085 20230619_1883_Aki_TMTPro18x_K_F4 153.75 117.81 67374 56368 61415 59097 61408 57853 60186 67971 82151 67334 73655 62232 75708 58566 77229 73738 71154 78864 62262 51634 62847 59499 63729 58883 61468 68696 82067 67950 75989 63350 77227 61383 78153 74152 68191 74823 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280560000 8283 4359 7840 15736;15737 12638 12638 1 9606 Homo sapiens 0.02125724678307961 FDGVEGPR Unmodified 875.41373 0.41373097 4130 Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A8I5KSP1;A0A0B4J210;E5RH50;H0YBW1;H0YAN4 LARP1 La-related protein 1 yes no 0 0 0 3 0 1 41.982 42.045 2 0.0094145 10475 20230619_1882_Aki_TMTPro18x_K_F3 95.531 58.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8284 4130 7841 15738 12639 12639 1 9606 Homo sapiens -0.028959342048096914 FDGVQDPR Unmodified 932.43519 0.4351947 3209 Q6IB11;O00264;O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 yes no 0 0 0 3 0 1 41.236 41.295 2 0.039797 10171 20230619_1882_Aki_TMTPro18x_K_F3 72.485 38.672 122080 97830 109550 129000 121240 137340 159170 166320 207030 160820 179020 176650 181020 146780 149930 194010 200580 178810 112770 89825 112660 127830 126140 138870 159700 167710 206880 163360 185010 177690 183230 154890 156040 193220 191270 170070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87870000 8285 3209 7842 15739 12640 12640 1 9606 Homo sapiens -0.033725491761060766 FDITIGPK Unmodified 889.49092 0.49091866 60 A0A024QZR5;Q9Y2T2;Q8NDP0;B4DRN6 AP3M1;DKFZp586G1518 AP-3 complex subunit mu-1 yes no 0 0 0 8 0 1 58.054 58.101 2 0.0056633 17036 20230619_1888_Aki_TMTPro18x_K_F8 121.62 64.06 49375 44057 54531 52305 42696 53288 50863 50226 57780 61939 63880 58289 60862 50257 53794 61436 67747 75647 45721 40393 54778 52175 45544 53736 51059 51843 58730 61852 65076 59078 61875 52739 55641 62322 64740 71670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16107000 8286 60 7843 15740 12641 12641 1 9606 Homo sapiens 0.04175284011523672 FDKEEEIRK Unmodified 1192.6088 0.60880197 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 2 4.5 0.5 1 1 42.039 42.103 4 0.0081759 10378 20230619_1885_Aki_TMTPro18x_K_F5 73.499 53.922 100460 65688 86990 95311 105490 117300 110160 109080 145460 122500 131680 128770 135440 114170 110510 148170 160550 136610 92675 60431 89825 94068 108340 116720 111860 112350 145570 123340 135860 130010 136990 120030 115770 147590 152970 129960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120710000 8287 2863 7844 15741;15742 12642 12642 1 9606 Homo sapiens 0.020201918095153815 FDLLASNFPPLPGSSSR Unmodified 1803.9155 0.91554867 4143 Q71RC2-5;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2;Q71RC2-6;Q71RC2-3 LARP4 La-related protein 4 yes no 0 0 0 4 0 1 64.135 64.143 3 3.3497E-06 20080 20230619_1883_Aki_TMTPro18x_K_F4 102.36 86.605 6091.6 7590.7 7560.6 6995.3 7267.7 8298.7 8978.2 7250 7731.6 8629.3 7146.7 6740.4 11494 6573.9 6903.1 10136 5193.9 9265.8 5662.4 6937.6 7552.2 7137.5 7610.5 8274.4 8912.1 7519.2 7936 8589.5 7544.8 6928.1 11349 6991.3 7025.6 10069 5014.2 8795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12226000 8288 4143 7845 15743 12643 12643 1 9606 Homo sapiens 0.045747521809744285 FDLLEELVAK Unmodified 1175.6438 0.64379049 263 H7C0V0;A0A024R3U8;Q8WWC4 C2orf47;FLJ22555 Uncharacterized protein C2orf47, mitochondrial yes no 0 0 0 6.5 0.5 1 1 65.869 65.903 3 0.0028944 20457 20230619_1887_Aki_TMTPro18x_K_F7 64.73 41.006 49703 61649 53677 41550 77509 70097 66739 66862 105210 68452 70079 66843 58678 57054 69552 94918 90716 86937 46137 56231 54467 44100 78273 68758 69057 68520 103500 69132 73041 67683 60874 61136 71845 94236 86566 82672 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29412000 8289 263 7846 15744;15745 12644 12644 1 9606 Homo sapiens 0.06299434617449151 FDLMYAK Oxidation (M) 902.42079 0.42079019 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;B4DN58;Q15670;A6NHL2-2;A6NHL2;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;C9J2C0;Q9NY65-2;Q9NY65;Q6PEY2;Q7Z3M3;A0A7P0T945;Q8N532;V9GZ17 TUBA1B;TUBAL3;TUBA4A;TUBA1A;TUBA1C;TUBA2;TUBA8;TUBA3E;DKFZp686L04275 Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain no no 0 1 0 4.86 3.09 2 1 2 2 53.999 54.043 2;3 0.025712 15901 20230619_1880_Aki_TMTPro18x_K_F1 67.757 34.637 2627900 2010500 2163400 2440000 2560200 2842500 2612600 2520700 2951000 2269200 2462900 2361600 2276100 2161700 2612600 2564000 2500300 2306700 2425400 1844800 2243900 2433900 2630900 2836400 2641100 2591200 2965600 2311300 2542100 2387800 2346600 2256200 2644200 2556300 2392100 2194400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 8587099999.999999 8290 2408;3747;4144 7847 15746;15747;15748;15749;15750;15751;15752 12645;12646;12647;12648 12645 1487 4 9606 Homo sapiens -0.034323376485986046 FDLMYAK Unmodified 886.42588 0.42587556 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;B4DN58;Q15670;A6NHL2-2;A6NHL2;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;C9J2C0;Q9NY65-2;Q9NY65;Q6PEY2;Q7Z3M3;A0A7P0T945;Q8N532;V9GZ17 TUBA1B;TUBAL3;TUBA4A;TUBA1A;TUBA1C;TUBA2;TUBA8;TUBA3E;DKFZp686L04275 Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain no no 0 0 0 1 0 1 58.877 58.877 2 0.014346 18003 20230619_1880_Aki_TMTPro18x_K_F1 112.75 55.643 1732400 1324800 1341700 1564900 1140300 2072200 1275800 2203400 1058300 1571700 1407100 1345200 674290 2278000 635110 2576800 746090 1601500 1598200 1215300 1394500 1567500 1211000 2057300 1275300 2221400 1106200 1614500 1394600 1411000 721360 2325500 664260 2524600 718700 1528400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5186200000 8291 2408;3747;4144 7847 15753 12649 12649 1 9606 Homo sapiens -0.021880337859897736 FDLNSPWEAFPVYR Unmodified 1739.8308 0.83075641 3307 O75489;Q9UF24;Q53FM7 NDUFS3;DKFZp586K0821 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes no 0 0 0 1.5 0.5 1 1 64.469 64.473 3 4.8511E-12 20582 20230619_1881_Aki_TMTPro18x_K_F2 185.95 159.83 15921 14537 17626 20525 18376 23614 18149 22863 24760 25515 24872 23405 25227 28444 17922 30635 28587 29569 14745 13351 17795 20267 19055 23611 18533 23462 24866 25588 25506 24044 25448 29260 19013 30655 27256 28092 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98877000 8292 3307 7848 15754;15755 12650 12650 1 9606 Homo sapiens -0.009565735649857743 FDLPDMK Unmodified 864.40514 0.40514012 1711 A0A7P0TAL9;A0A7P0TBA9;B7ZKK7;P19525-2;P19525;Q8IW76;A0A7P0Z4M0;Q05CP4;Q6PK38 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes no 0 0 0 5.5 0.5 1 1 58.155 58.218 2 0.077223 17347 20230619_1886_Aki_TMTPro18x_K_F6 73.931 42.559 138300 120760 114000 133560 104250 137900 149030 136160 159850 176210 159510 174200 203590 164900 148060 195000 178980 199250 127750 110650 117850 133910 110480 139070 147960 140330 162360 175860 165660 176560 203710 172050 153500 195570 171090 189130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75266000 8293 1711 7849 15756;15757 12651 12651 1 9606 Homo sapiens -0.03248624165644287 FDNLYGCR Unmodified 1043.4495 0.44946455 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 0 7 0.816 1 1 1 48.096 48.171 2 0.0020058 12730 20230619_1887_Aki_TMTPro18x_K_F7 133.6 116.21 576230 483970 476350 533430 480660 593250 503640 536950 713270 717000 656110 700830 808480 709840 595390 983870 940120 1000300 532150 443510 492630 535520 500710 594110 513070 557120 712960 714730 682540 712860 810810 746440 630370 983880 896590 949720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 498440000 8294 1439 7850 15758;15759;15760 12652;12653 12653 2 9606 Homo sapiens -0.0705222001945458 FDNSDLSA Unmodified 867.36103 0.3610267 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 0 0 1.5 0.5 1 1 51.475 51.497 2 0.0074187 14947 20230619_1880_Aki_TMTPro18x_K_F1 107.67 101.93 74529 50848 56464 67125 71227 74702 70939 70153 99207 74379 79158 83695 91499 77272 64363 77361 89975 79793 68705 46720 59141 66529 72877 74862 72383 72105 98607 75294 82688 84300 91730 79925 67403 77853 85770 75800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 353240000 8295 1044 7851 15761;15762 12654 12654 1 9606 Homo sapiens -0.07795937058290292 FDNSYSLWR Unmodified 1186.5407 0.5407224 257 A0A024R3P9;Q9H3P7 ACBD3 Golgi resident protein GCP60 yes no 0 0 0 1 0 1 57.808 57.808 2 4.5118E-08 17626 20230619_1880_Aki_TMTPro18x_K_F1 200.86 166.05 63619 56899 60355 73393 64137 75910 77562 76412 87081 72801 67385 65267 78101 62970 80581 78503 76452 76631 58836 52210 61734 72778 66729 76560 77696 77939 87371 73569 70547 66551 79470 65878 81656 78544 73190 72804 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82033000 8296 257 7852 15763 12655 12655 1 9606 Homo sapiens -0.045086330504773287 FDPAMFNISPGAVQF Oxidation (M) 1655.7654 0.76537896 2173 Q8IVD9;B0FTY2;A4D2J8 NUDCD3;KIAA1068 NudC domain-containing protein 3 yes no 0 1 0 4.5 3.5 1 1 66.249 66.258 3 1.6594E-05 20461 20230619_1888_Aki_TMTPro18x_K_F8 103.85 82.9 9714.4 9544.4 11113 12841 8404.7 9819.9 11026 10358 13141 12021 13481 11346 14636 10879 12827 11988 11326 11938 9004.6 8759.2 11143 12655 9017 10170 11034 10598 13275 12042 13851 11540 14800 11305 12988 12031 10855 11337 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12146000 8297 2173 7853 15764;15765 12656;12657 12657 1345 2 9606 Homo sapiens -0.036273110823231036 FDPAMFNISPGAVQF Unmodified 1639.7705 0.77046434 2173 Q8IVD9;B0FTY2;A4D2J8 NUDCD3;KIAA1068 NudC domain-containing protein 3 yes no 0 0 0 1.5 0.5 1 1 67.414 67.417 3 0.0009644 21763 20230619_1881_Aki_TMTPro18x_K_F2 74.769 67.36 3288.1 2590.9 3352.3 3498.7 2274 3772.9 2971.6 4306.1 5129.2 4275.9 3926.4 4339.8 4269.4 3690.4 4134.7 2986.2 4725 3629.3 3040.2 2379.7 3385.8 3462.7 2480.4 3802.1 3026.2 4356.9 5053.3 4325.6 4102.5 4375.3 4341.5 3791.9 4232.2 3053.1 4507.6 3444.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9493300 8298 2173 7853 15766;15767 12658 12658 1 9606 Homo sapiens -0.023830072197142727 FDPDLDLDHPGFSDQVYR Unmodified 2134.9596 0.95959833 3395 P07101-3;P07101-4;P07101-2;P07101;P07101-6;P07101-5 TH Tyrosine 3-monooxygenase yes no 0 0 0 2.5 0.5 1 1 59.303 59.324 3 9.0729E-24 18123 20230619_1882_Aki_TMTPro18x_K_F3 199.01 184.84 97283 85544 85693 151060 73218 90879 91849 99904 105710 87663 75512 87105 94163 73078 90888 98352 90486 97994 89908 78804 88224 146180 77661 96563 91981 101240 105690 89240 79817 87967 95324 77219 92499 98383 86633 93052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44922000 8299 3395 7854 15768;15769 12659 12659 1 9606 Homo sapiens -0.06248308183376139 FDPNEIK Unmodified 861.42323 0.42323303 3530 P30050;Q59FI9;P30050-2;D3DS95;Q76P68 RPL12;hCG_21173;cICK0721Q.2 60S ribosomal protein L12 yes no 0 0 0 4 0 1 50.884 50.915 2 0.010873 14377 20230619_1883_Aki_TMTPro18x_K_F4 117.4 25.499 195610 171560 187150 179140 165870 195840 184950 178600 243280 256600 292940 294140 307390 248500 215780 347440 320080 288520 180890 157120 190450 180630 174710 196450 187270 185770 246540 256300 298690 295500 308910 262990 227510 343860 305020 274770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172010000 8300 3530 7855 15770 12660 12660 1 9606 Homo sapiens -0.013021659192872903 FDPVGPLPGPNPILPGR Unmodified 1741.9515 0.95154025 2106 Q5HYB3;A8K7F7;Q9Y3I1-3;Q9Y3I1-2;Q9Y3I1 DKFZp686B08113;FBXO7 F-box only protein 7 yes no 0 0 0 2 0 1 62.502 62.511 3 0.0043202 19719 20230619_1881_Aki_TMTPro18x_K_F2 68.481 53.605 56634 44842 57798 59319 57430 62832 59341 56727 66261 59314 56948 48075 54213 40068 51703 55512 56293 54349 52366 41176 58616 58755 59729 63127 59945 58455 66738 59479 58690 49073 55264 42453 52894 55458 53803 51640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47514000 8301 2106 7856 15771 12661 12661 1 9606 Homo sapiens 0.11024254148514956 FDPYEHEALFHTPVEGK Unmodified 2014.9425 0.94249171 4543 Q9HAV7;B4DWV5 GRPEL1 GrpE protein homolog 1, mitochondrial;GrpE protein homolog yes no 0 0 0 5.5 1.12 1 1 1 1 52.975 53.035 4 1.7213E-23 15174 20230619_1886_Aki_TMTPro18x_K_F6 205.52 189.4 423140 349470 425470 517790 411730 489960 456110 436890 472610 618350 623190 691710 661460 606850 593150 757070 726540 860820 391310 321270 432400 508360 430160 496150 458030 455110 487220 617200 634460 695870 671010 636670 612680 763610 694790 816010 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 815090000 8302 4543 7857 15772;15773;15774;15775 12662;12663;12664 12664 3 9606 Homo sapiens -0.024381839985380793 FDPYTLAIDVLDSPQAVR Unmodified 2019.0313 0.031306713 3395 P07101-3;P07101-4;P07101-2;P07101;P07101-6;P07101-5 TH Tyrosine 3-monooxygenase yes no 0 0 0 7 0.816 1 1 1 66.68 66.708 3 6.183700000000001E-31 20793 20230619_1887_Aki_TMTPro18x_K_F7 238.83 223.96 13283 11267 15408 39806 8781.9 8170.8 15684 18015 11835 20699 20729 22896 21863 20517 24132 18827 19713 24444 12301 10529 15520 37346 9798.8 10846 15318 17852 12659 20808 20926 23044 22386 21153 24227 19281 18936 23141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164160000 8303 3395 7858 15776;15777;15778 12665 12665 1 9606 Homo sapiens 0.06255231241152615 FDQLFDDESDPFEVLK Unmodified 1942.8836 0.88363942 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 0 3 2.16 1 1 1 65.885 65.902 3 4.3068E-08 21165 20230619_1881_Aki_TMTPro18x_K_F2 126.63 116.43 44894 35574 44508 43987 41481 49662 46661 47275 51876 51368 58124 54388 68117 53250 50034 74027 58504 67976 41501 32643 45200 43813 43499 49724 46930 48568 52807 51794 59734 55107 68313 56078 51802 73640 55960 64594 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 166050000 8304 4246 7859 15779;15780;15781 12666;12667;12668 12667 3 9606 Homo sapiens -0.05008705083514542 FDREVDIGIPDATGR Unmodified 1659.8216 0.82164829 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;A0A7I2V2Y2;A0A7P0TAY0 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 1 4 0 1 52.356 52.38 3 1.9731E-07 15104 20230619_1883_Aki_TMTPro18x_K_F4 123.36 93.673 98070 75279 97882 94293 90077 101050 98498 106080 132150 136170 108300 102190 111470 101570 111390 132150 118100 125580 90646 69094 99304 93784 94477 101780 99896 108770 131880 134980 112340 105260 113730 106410 113760 131880 112990 119320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206730000 8305 3656 7860 15782 12669 12669 1 9606 Homo sapiens 0.018130330786789273 FDSEYER Unmodified 944.38758 0.3875758 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991;H0Y8T4 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 0 1.5 0.5 1 1 40.253 40.29 2 0.0068189 9919 20230619_1881_Aki_TMTPro18x_K_F2 130.04 105.7 465000 355840 413810 476900 534730 574480 530360 559300 664150 606760 672280 684740 734910 583770 551420 685580 794310 667830 429410 326840 426830 472810 545940 573100 539120 573540 669280 613130 691940 688220 739290 610980 578020 685970 756760 634960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1633999999.9999998 8306 1059 7861 15783;15784 12670;12671 12670 2 9606 Homo sapiens -0.08684248166946418 FDSNNVVLIEDNGNPVGTR Unmodified 2058.997 0.99704647 750 A0A024RD78;Q6P1L8 MRPL14 39S ribosomal protein L14, mitochondrial yes no 0 0 0 4 0 1 57.335 57.341 3 3.0036E-10 17215 20230619_1883_Aki_TMTPro18x_K_F4 127.37 111.57 24347 21785 25776 27484 30378 38313 31568 33944 39766 38051 36887 38679 42328 34533 38836 41424 40885 41153 22537 19985 26154 27424 31267 37803 32014 35069 39945 38263 38233 39093 42853 36130 39679 41496 39100 39089 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35287000 8307 750 7862 15785 12672 12672 1 9606 Homo sapiens 0.009907830823067343 FDSPESAEK Unmodified 1008.44 0.4400053 923 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;Q9Y655;A0A087WUT0;A0A024R5Q6;A0A0C4DGV1;Q9P2K5-3;H0YKS1 MYEF2 Myelin expression factor 2 yes no 0 0 0 3 0 1 43.431 43.501 2 7.7186E-05 11134 20230619_1882_Aki_TMTPro18x_K_F3 181.41 100.22 71821 54582 79184 74975 65679 66216 72995 70577 93326 87797 98786 95267 110670 85440 78449 68013 113910 99881 66438 50149 79580 73940 69446 67737 73843 72293 94127 88052 101540 95976 111000 87633 82221 70458 108550 94581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45523000 8308 923 7863 15786 12673 12673 1 9606 Homo sapiens -0.06387709823991372 FDSSLDRK Unmodified 966.47706 0.47705951 3789 Q02790;B2R9U2;F5H1U3 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 1 6 0.816 1 1 1 41.685 41.768 3 0.00061242 9968 20230619_1887_Aki_TMTPro18x_K_F7 122.19 86.694 984060 683880 872980 899340 892530 909120 889820 883310 1147000 1057100 1197100 1147900 1212800 1050600 1053000 1185600 1425500 1202300 908230 628280 896280 890660 925590 918170 905570 909010 1155700 1062100 1226000 1158200 1230300 1094000 1094800 1189900 1358800 1142600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1483699999.9999998 8309 3789 7864 15787;15788;15789 12674;12675 12675 2 9606 Homo sapiens -0.007519934875631407 FDSSYDRDSTFNVFVGK Unmodified 1982.901 0.90102082 906 B7Z1U8;B3KQQ0;A0A090N8P3;O95302 FKBP9 Peptidyl-prolyl cis-trans isomerase FKBP9 yes no 0 0 1 7.5 0.5 1 1 60.008 60.049 3 2.9501E-18 17793 20230619_1888_Aki_TMTPro18x_K_F8 145.61 136.03 124000 98538 111490 116310 115620 137690 129080 121840 138110 133080 135250 159800 156730 124060 164030 160070 156210 179680 114540 90377 114400 116290 120230 137230 129640 125900 140100 134710 140070 159740 159550 131110 166220 161380 149700 170370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68281000 8310 906 7865 15790;15791 12676 12676 1 9606 Homo sapiens -0.05111364757863157 FDTGNLCMVTGGANLGR Oxidation (M) 1797.8138 0.81380249 2202 Q96IR1;B2R491;P62701;Q53HV1 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform yes no 0 1 0 3.67 3.09 1 1 1 54.673 54.704 3 1.8118E-09 16210 20230619_1880_Aki_TMTPro18x_K_F1 133.23 126 161190 123580 138580 167620 157460 165160 186130 188320 183760 151520 153980 158340 175520 150480 163090 190220 169380 173460 148810 113520 143130 165600 162760 167710 185900 189820 186090 155330 160400 160280 177890 157550 166560 189510 162030 164920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2646600000 8311 2202 7866 15792;15793;15794 12677;12678;12679 12677 1373 3 9606 Homo sapiens -0.053191855047316494 FDTGNLCMVTGGANLGR Unmodified 1781.8189 0.81888787 2202 Q96IR1;B2R491;P62701;Q53HV1 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform yes no 0 0 0 2 0 1 58.904 58.918 3 7.8949E-24 18169 20230619_1881_Aki_TMTPro18x_K_F2 209.66 198.76 223450 171470 243310 189770 153430 213990 206250 206670 215030 258550 202640 199080 259850 207380 189150 267690 231920 238800 206690 157200 243870 190660 168180 214330 205360 212960 218410 256660 210930 205090 259970 216930 196380 266180 221540 227100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 873230000 8312 2202 7866 15795 12680;12681 12681 2 9606 Homo sapiens -0.04074881642100081 FDTISEK Unmodified 838.40725 0.40724861 2788;555 A0A3Q8Q4D0;A0A3S8NFS6;A0A0K0Q2Z1;A0A024R944;A0A2S0BDD1;P01008;Q8TCE1;CON__P41361 SERPINC1 Antithrombin-III no no 0 0 0 4.5 0.5 1 1 48.311 48.369 2 0.0050861 13194 20230619_1883_Aki_TMTPro18x_K_F4 151.29 79.343 + 147680 93903 111450 169530 271250 324660 178860 167820 505960 668360 1436300 2315100 748950 1122700 1357500 598280 1421700 1764600 136090 86648 119010 166610 267660 312840 196190 196510 532470 697690 1406300 2229900 818030 1167600 1369100 677520 1362000 1662400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 790050000 8313 555;2788 7867 15796;15797 12682;12683 12682 2 9606 Homo sapiens -0.018418721561829443 FDTIYQILLK Unmodified 1252.7067 0.7067251 3885 Q59GW5;Q14258;D3DTY9;A0A3B3IUA7 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes no 0 0 0 4 0 1 65.768 65.779 3 0.038561 20739 20230619_1883_Aki_TMTPro18x_K_F4 50.284 37.147 5851.4 4709.9 4633.2 5987.3 6520.4 6737.2 6282.5 6470.2 8243.9 4940.6 7238.4 7208 7852.6 7235.6 7354.2 8541.9 9191.1 8335.4 5400.8 4322.8 4844.2 5949.1 6619.8 6749.9 6406.6 6588.9 8233.7 5152.1 7500.6 7225.2 7978 7526.9 7594.5 8548.2 8770.3 7922.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9171500 8314 3885 7868 15798 12684 12684 1 9606 Homo sapiens 0.09048000405505263 FDTPFLPK Unmodified 963.50657 0.50656873 3896 Q14684;Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 0 1 0 1 60.944 60.944 2 0.0018478 18850 20230619_1880_Aki_TMTPro18x_K_F1 136.11 112.14 111320 96262 98125 114130 93150 110470 106400 112920 108210 128830 117890 108130 144850 112500 111250 145610 138580 142760 102870 88265 100800 113750 97583 112040 106620 115600 110670 128680 121590 110930 145330 117730 115420 145520 132360 135610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232210000 8315 3896 7869 15799 12685 12685 1 9606 Homo sapiens 0.023355705285553086 FDTQYPYGEK Unmodified 1246.5506 0.55061839 3526 V9HW71;P30040;F8W1G0 HEL-S-107;ERP29 Endoplasmic reticulum resident protein 29 yes no 0 0 0 5 0.816 2 2 2 50.685 50.753 2;3 1.2688E-06 14321 20230619_1883_Aki_TMTPro18x_K_F4 147.37 99.085 419700 374990 411350 417330 313110 393220 457630 435980 491180 575260 664290 681350 663620 561460 564210 683680 641500 696160 388250 343590 417220 417910 337230 400480 454260 446320 505460 576880 673400 682830 672510 589520 580430 685430 613410 660880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 722300000 8316 3526 7870 15800;15801;15802;15803;15804;15805 12686;12687;12688 12686 3 9606 Homo sapiens -0.06279489835787899 FDVAAEYYK Unmodified 1104.5128 0.51277632 933 A0A0A0MRC4;Q86YR5;A0A0A0MSK4;Q86YR5-4;Q86YR5-3;A0A087WVF5 GPSM1 G-protein-signaling modulator 1 yes no 0 0 0 6 0 1 56.645 56.717 2 0.0014467 16786 20230619_1886_Aki_TMTPro18x_K_F6 115.71 93.566 67054 57939 63359 64119 56649 66851 65774 66831 83807 83053 88427 85832 99710 99113 84281 105890 101460 110540 61996 53092 64576 64312 59688 67406 66371 68709 84549 83190 90971 87509 100780 102110 87044 106500 96969 104910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167550000 8317 933 7871 15806 12689 12689 1 9606 Homo sapiens -0.035299560305929845 FDVPGDENAEMDAR Unmodified 1564.6464 0.64638604 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 1 0 1 50.572 50.572 2 1.7424999999999997E-21 14598 20230619_1880_Aki_TMTPro18x_K_F1 219.43 210.43 28168 23365 27990 26419 21933 36105 28729 27047 33772 37196 40648 47346 48292 42521 35291 50739 46940 55557 26047 21417 28363 26560 23544 35542 28740 28533 34408 37364 41747 47433 48443 44449 36846 51077 44859 52686 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44777000 8318 707 7872 15807 12690 12690 1 9606 Homo sapiens -0.11335129777853581 FDVQFPENNWINPDK Unmodified 1861.8635 0.8635131 409 A0A024R6S1;O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes no 0 0 0 5.5 0.5 1 1 63.119 63.167 3 2.0852E-05 19536 20230619_1886_Aki_TMTPro18x_K_F6 104.45 82.614 173910 142170 157960 191310 129320 194750 171590 190350 216390 234010 195240 229640 280780 237790 180280 309750 284110 278740 160680 130560 161620 189130 138250 196410 172010 195890 217310 234040 205180 233620 279200 248800 191520 307980 270800 265100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166560000 8319 409 7873 15808;15809 12691 12691 1 9606 Homo sapiens -0.03294411232764105 FDVQSSLK Unmodified 922.476 0.47599688 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 8 0 1 51.552 51.629 2 0.00072991 14222 20230619_1888_Aki_TMTPro18x_K_F8 133.57 60.314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8320 1552 7874 15810 12692 12692 1 9606 Homo sapiens 0.011657921435244134 FDVSGYPTLK Unmodified 1125.5706 0.57062555 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 1.5 0.5 2 2 57.154 57.162 2;3 4.0055E-05 17290 20230619_1880_Aki_TMTPro18x_K_F1 150.08 0 263710 217640 252000 253280 258360 300960 307470 294060 315700 351910 343250 360600 405140 310280 376070 406930 355550 393760 243760 199560 257120 253560 269260 300560 307430 302410 322520 352720 353780 363980 409850 326980 381980 406550 340650 374000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 985700000 8321 909 7875 15811;15812;15813;15814 12693;12694 12693 2 9606 Homo sapiens 0.012863058948596517 FDVSSTSVFK Unmodified 1115.5499 0.5498901 498 A0A024R872;Q96TA1-2;Q96TA1;Q9H8K1 C9orf88;FAM129B Niban-like protein 1 yes no 0 0 0 1 0 1 57.797 57.797 3 0.00054182 17632 20230619_1880_Aki_TMTPro18x_K_F1 99.815 83.924 90208 51068 67948 77846 76012 74047 90541 89533 119440 110990 121860 109350 126710 114330 121560 138580 102340 126890 83082 47043 71052 76349 78728 75518 91316 90965 120100 111010 125040 111360 128940 119010 122750 138170 98272 120550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87065000 8322 498 7876 15815 12695;12696 12696 2 9606 Homo sapiens -0.0032628448479954386 FDYAFDDSAPNEMVYR Oxidation (M) 1954.8043 0.80434324 1621 B0AZS5;A0A6Q8PFA6;A0A6Q8PH57;O00139-2;A0A6Q8PGH7;A0A6Q8PG37;B4DM85;O00139-1;O00139-5;O00139;O00139-4;A0A6Q8PGG1;D6R9M0 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 1 0 3 0 1 58.183 58.213 2 0.040358 17684 20230619_1882_Aki_TMTPro18x_K_F3 63.408 62.584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8323 1621 7877 15816 12697 12697 1052 1 9606 Homo sapiens -0.13486675309309248 FDYTNER Unmodified 943.40356 0.40356022 1633 A0A6Q8PGB0;P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 0 3 0 1 40.957 41.016 2 0.010526 10025 20230619_1882_Aki_TMTPro18x_K_F3 104.75 85.387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8324 1633 7878 15817 12698 12698 1 9606 Homo sapiens -0.070405419300414 FEAAETLEEAAMR Oxidation (M) 1482.6661 0.66605885 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;H0YJT3;H0YJU9;H0YJL0;H0YG16 KLC1;KNS2 Kinesin light chain 1 yes no 0 1 0 2 0 1 56.977 56.993 3 0.00079744 17350 20230619_1881_Aki_TMTPro18x_K_F2 84.892 36.888 45466 43447 46673 47836 46057 47077 50293 52090 56830 54351 53903 57288 58526 43967 53919 61695 54472 58113 42094 39797 47304 47967 47971 47804 50682 52928 57419 54884 55671 57574 59326 46749 54985 61489 52138 55220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 124430000 8325 3808 7879 15818 12699;12700 12699 2483 2 9606 Homo sapiens -0.05596753767076734 FEAAETLEEAAMR Unmodified 1466.6711 0.67114423 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;H0YJT3;H0YJU9;H0YJL0;H0YG16 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 0 2.5 0.5 1 1 60.97 60.99 3 4.2611E-06 19014 20230619_1881_Aki_TMTPro18x_K_F2 129.04 66.628 24701 22693 22764 25185 24233 31496 22928 28010 51626 29008 24472 27610 36105 27950 27975 29656 34893 35016 22843 20791 23325 25315 25126 31282 24067 28862 49836 29284 26900 28091 36095 28937 28978 30070 33320 33201 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69807000 8326 3808 7879 15819;15820 12701 12701 1 9606 Homo sapiens -0.04352449904467903 FEAFEEDR Unmodified 1041.4403 0.44033966 858 Q6UXD5;Q8NC33;B7Z5L4;A0A0A8K8P7;X5DNZ5;X5D2T7;X5D9G4;B3KNK2;A0A087WYL5;Q6UXD5-6;Q6UXD5-2;Q6UXD5-3;Q6UXD5-5;X5D9C2;B3KNF3;Q6UXD5-4 SEZ6L2;PSK-1 Seizure 6-like protein 2 yes no 0 0 0 1 0 1 49.767 49.767 2 0.00099017 14277 20230619_1880_Aki_TMTPro18x_K_F1 151.5 119.56 104720 78017 95863 80160 45807 61889 68671 73235 76112 108260 148520 158570 129090 126880 145320 118010 144010 160730 96710 71485 97257 80648 52278 64261 68309 75014 80005 108980 148230 157540 133200 131400 147270 121220 137920 152140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51553000 8327 858 7880 15821 12702 12702 1 9606 Homo sapiens -0.07872290104137392 FEAFEHENK Unmodified 1149.5091 0.50908792 1430 Q5JPE4;A0A384MR19;F8VXU5;Q9UBQ0;Q9UBQ0-2;Q05DG7 DKFZp667O202;VPS29 Vacuolar protein sorting-associated protein 29 yes no 0 0 0 4 0.816 1 1 1 45.353 45.419 3 0.00051705 12032 20230619_1882_Aki_TMTPro18x_K_F3 112.13 83.172 414340 296120 381120 388290 395410 444470 401320 443400 533870 468180 631550 557650 609560 585360 532140 727210 643960 653670 382570 272000 390150 385320 410130 445090 408650 453590 539790 474810 641760 563910 619660 609900 549750 723820 615120 621610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 596780000 8328 1430 7881 15822;15823;15824 12703 12703 1 9606 Homo sapiens -0.05968625804439398 FEAGQFEPSETTAK Unmodified 1540.7046 0.70455285 4041 Q5JTJ3-3;Q5JTJ3;Q5JTJ3-2 COA6 Cytochrome c oxidase assembly factor 6 homolog yes no 0 0 0 4 0 1 51.821 51.848 3 0.00062314 14817 20230619_1883_Aki_TMTPro18x_K_F4 87.363 76.895 181160 146320 172490 183810 181360 210240 178500 173330 198810 209900 232960 263410 246750 207620 230710 263040 245580 314030 167440 134280 176140 182860 187720 209730 180840 180670 202830 211790 238240 263040 250600 219000 235910 266170 235300 297480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107890000 8329 4041 7882 15825 12704;12705 12705 2 9606 Homo sapiens -0.04417124860901822 FEAHPNDLYVEGLPENIPFR Unmodified 2356.1488 0.14879609 2144;1327 A0A1W6S962;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9;A0A494C0Q7 GTF2I General transcription factor II-I no no 0 0 0 5 0 1 61.507 61.555 3 9.1192E-30 18593 20230619_1885_Aki_TMTPro18x_K_F5 203.81 174.33 72274 66493 73438 85120 67259 85559 71234 80727 99938 77220 81760 82482 87202 89697 92562 91682 94207 94436 66891 61003 74487 84417 70598 86339 72516 82710 99396 78461 85004 83770 89200 92325 94113 92272 90122 89665 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 906860000 8330 1327;2144 7883 15826 12706 12706 1 9606 Homo sapiens 0.02496764109992 FEAPLFNAR Unmodified 1063.5451 0.5450795 1339 E5KRK5;A0A291FIZ5;P28331-4;P28331;P28331-2;P28331-5;B4DJ81;P28331-3 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 1.5 0.5 1 1 56.318 56.328 2 0.0016929 16957 20230619_1880_Aki_TMTPro18x_K_F1 113.41 57.033 121880 104710 139170 148200 145820 185560 167960 168730 179270 139780 141010 120590 162600 131530 133980 154860 143260 143670 112870 96192 140140 146520 151660 184290 168400 172730 180380 142340 147280 123820 163880 136590 137370 154570 136980 136570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169720000 8331 1339 7884 15827;15828 12707 12707 1 9606 Homo sapiens 0.01584876163087756 FECGEGEEAAETE Unmodified 1456.53 0.53001888 2870 E5KS95;P43897;P43897-2;B4DHY8 TSFM Elongation factor Ts, mitochondrial yes no 0 0 0 1 0 1 47.278 47.278 2 1.3745E-10 13214 20230619_1880_Aki_TMTPro18x_K_F1 183.65 183.65 40956 34807 38299 38727 40667 49188 42998 48410 57798 55636 53457 58555 56607 52186 48746 65224 70152 67559 37860 31899 39170 38942 42183 48924 43688 49671 57884 55935 55213 59090 57358 54716 50977 65413 66896 64153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96214000 8332 2870 7885 15829 12708 12708 1 9606 Homo sapiens -0.17998493068375865 FEDENFILK Unmodified 1153.5655 0.56554017 2036;3735 P62937;A8K486;V9HWF5;B2RE56;Q71V99;F8WE65;C9J5S7;P62937-2;A0A7I2V4V1 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase no no 0 0 0 4.17 1.99 1 2 1 4 1 1 1 1 62.321 62.349 2;3 1.3092E-10 19046 20230619_1881_Aki_TMTPro18x_K_F2 169.21 62.298 1839700 1342900 1433700 1657700 1265700 1827100 1534200 1677900 2112100 2140100 2034800 2481600 2642000 2497800 1580600 3411300 2068600 3001000 1696800 1232600 1489400 1650200 1340800 1830200 1549700 1736600 2117100 2149200 2119400 2505200 2628900 2622200 1663600 3384600 1981000 2851300 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 19105000000 8333 2036;3735 7886 15830;15831;15832;15833;15834;15835;15836;15837;15838;15839;15840;15841 12709;12710;12711;12712;12713;12714;12715;12716;12717;12718;12719;12720 12711 12 9606 Homo sapiens -0.0050999796776523 FEDHEGLPTVVK Unmodified 1369.6878 0.68778057 2568 B4DPV7;P49589-3;A8K067;B4DKY1;A0A024RCG3;P49589-2;P49589;A8MVQ3;B4DI19;Q53HG6 CARS Cysteine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0 1 50.079 50.155 3 0.0098232 13828 20230619_1885_Aki_TMTPro18x_K_F5 67.252 52.833 69641 55844 60651 70965 77349 76317 65996 68180 90375 71773 82133 76465 69893 65000 86658 76904 82776 81800 64319 51255 62651 70474 78715 76605 67958 70320 90300 72533 84109 77053 72558 68038 87557 77400 79230 77646 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189540000 8334 2568 7887 15842 12721 12721 1 9606 Homo sapiens 0.017724190437775178 FEDPKFEVIEK Unmodified 1379.6973 0.69728262 3476 Q6IB54;P18859;P18859-2;Q6NZ59 ATP5J ATP synthase-coupling factor 6, mitochondrial yes no 0 0 1 6 0 1 55.984 56.058 3 0.00089033 16500 20230619_1886_Aki_TMTPro18x_K_F6 94.191 69.904 50952 39633 44207 53866 39266 54690 43218 54605 83432 69210 68616 107580 104300 94490 49839 148150 133510 190320 47047 36407 45459 53220 41478 55200 44608 56176 82126 70372 72833 107050 102890 100760 56820 150010 127330 180110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28833000 8335 3476 7888 15843 12722 12722 1 9606 Homo sapiens 0.022621873293019235 FEDPRDAEDAIYGR Unmodified 1652.7431 0.74306362 3844 Q13242;A8K3M9;H0YIB4;S4R3G0;B4DFT9 SRSF9 Serine/arginine-rich splicing factor 9 yes no 0 0 1 2 0.816 1 1 1 50.948 50.986 3 1.1856E-06 14873 20230619_1881_Aki_TMTPro18x_K_F2 104.7 101.55 299940 253630 277680 296880 298400 307620 297900 302280 348910 371430 356160 351560 391240 320600 335770 420700 382130 357510 277230 232550 284300 296460 308240 310270 302060 311020 353120 371050 366550 356840 395500 337000 345440 417390 365000 340330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 545430000 8336 3844 7889 15844;15845;15846 12723;12724;12725 12724 3 9606 Homo sapiens -0.057198192263740566 FEDRFDK Unmodified 955.43995 0.43994572 10 Q96JZ5;A0A024QYS2;Q9HD45;Q8WUB5;Q5TB53;Q8NCC4 SMBP;TM9SF3 Transmembrane 9 superfamily member 3 yes no 0 0 1 4 0.816 1 1 1 44.148 44.212 3 0.0096004 11348 20230619_1883_Aki_TMTPro18x_K_F4 95.099 55.054 385380 281090 311880 376390 369140 388890 431430 408700 512640 428510 505360 572750 553630 477890 437020 580940 618230 614160 355540 258230 324220 372350 380680 392740 433720 416850 517020 436520 521280 571710 558220 501430 457220 583560 589730 583000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 318060000 8337 10 7890 15847;15848;15849 12726 12726 1 9606 Homo sapiens -0.03955665033333844 FEDSPSYVK Unmodified 1070.492 0.49204087 2629 B7ZAX9;B4DZC0;O60264;Q4W5G3 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 4.5 0.5 1 1 48.558 48.615 2 1.7788E-06 13149 20230619_1885_Aki_TMTPro18x_K_F5 190.73 119.82 288520 209090 246190 256770 263050 305310 291490 245970 291440 349830 366680 352370 401950 321760 279220 429420 397870 383670 266270 191920 253950 256000 272830 303690 292230 258280 300200 348040 373970 356730 403210 338640 293460 426780 379430 364950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 219790000 8338 2629 7891 15850;15851 12727;12728 12728 2 9606 Homo sapiens -0.04038546410242816 FEDYLNAESR Unmodified 1242.5517 0.55168102 1949 Q8TC62;E7EPK1;A4GYY8;Q3LIE9;Q16181;Q16181-2;E7ES33;B4DUD6;B4DNE4;A8K3D0;A0A024RA87;A0A023T695;G3V1Q4;B4DPQ6;Q59EY4;Q3B7A3;A0A0U1RRE1;A0A0U1RRH9;A0A5F9ZGZ7 SEPT7;DKFZp686F17268;Nbla02942 Septin-7 yes no 0 0 0 3 0.816 1 1 1 53.513 53.546 2 8.3171E-07 15717 20230619_1882_Aki_TMTPro18x_K_F3 182.16 152.68 457090 334120 418770 486860 432430 516060 525570 524440 635710 509420 503370 536670 609550 524420 520320 608050 569680 639350 422090 307240 429310 479300 451100 519520 527770 534830 635850 516770 527540 543260 614630 545820 533890 611190 545070 606670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1017199999.9999999 8339 1949 7892 15852;15853;15854 12729;12730 12730 2 9606 Homo sapiens -0.059892754668680936 FEEAPDYMYLR Unmodified 1432.6333 0.63330216 1563 P48729-2;P48729;U3KPX3;A0A590UJ43;V9HW00;P48729-3;A0A5F9W493;B4DER9;B4E1D9;E7ETM0;D6REM4;B4DFH4;H0Y9X2;U3KQK7 CSNK1A1;HEL-S-77p Casein kinase I isoform alpha yes no 0 0 0 3.5 0.5 1 1 58.523 58.525 2 0.00022789 17705 20230619_1883_Aki_TMTPro18x_K_F4 126.82 91.314 76248 59037 76267 83813 62714 89003 85618 81848 100410 102080 87405 91033 109270 86133 83334 105640 97464 112270 70481 54259 77346 82642 66996 89370 85452 84662 100990 101760 91251 92727 109570 90105 86103 106150 93219 106510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22897000 8340 1563 7893 15855;15856 12731;12732;12733 12732 3 9606 Homo sapiens -0.06570916099281021 FEEAVTSYQK Unmodified 1200.5663 0.56626845 2853 D6RFW1;Q96EQ0 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta yes no 0 0 0 5 0 1 51.273 51.348 3 0.0069843 14330 20230619_1885_Aki_TMTPro18x_K_F5 79.974 54.588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8341 2853 7894 15857 12734 12734 1 9606 Homo sapiens -0.025992033187321795 FEEDFISK Unmodified 1013.4706 0.47057715 4392 Q96RF0-2;Q96RF0-3;Q96RF0 SNX18 Sorting nexin-18 yes no 0 0 0 3 0 1 57.156 57.188 3 0.044949 17243 20230619_1882_Aki_TMTPro18x_K_F3 55.567 12.119 35235 31336 36637 41885 27315 25418 38431 36747 42575 39732 40849 45077 39690 40646 37030 43448 40012 50428 32609 28766 36987 41221 29364 27226 38241 36872 43055 40151 41972 45353 40467 42199 37907 43990 38326 47785 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40903000 8342 4392 7895 15858 12735 12735 1 9606 Homo sapiens -0.03561931438946431 FEEDVEEETER Unmodified 1410.5787 0.57868363 3386 P04920;Q59GF1;P04920-3;Q99654;P04920-2;Q9UEY6;Q8TAG3;Q9UEY5;Q9UEY4;Q6PJY3;A0A7I2V5T6;E9PCP1;H7C1Z2;B4DR53;F8WD49;P48751;P48751-2;P48751-3 SLC4A2;SLC4A3 Anion exchange protein 2;Anion exchange protein;Anion exchange protein 3 yes no 0 0 0 1 0 1 47.677 47.677 2 2.0355E-08 13420 20230619_1880_Aki_TMTPro18x_K_F1 172.27 163.74 37096 24176 31736 38329 34134 44694 41350 36497 55171 48075 49365 58805 56795 43674 39249 66888 60057 65374 34217 22266 32774 37593 35551 44488 41675 38184 55176 48313 51284 58693 56892 46786 41523 66665 57298 62089 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26585000 8343 3386 7896 15859 12736 12736 1 9606 Homo sapiens -0.1101825643702341 FEEFQNTLSK Unmodified 1241.5928 0.59281755 3569 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 6.33 0.471 2 1 56.647 56.713 2;3 0.00012189 16753 20230619_1886_Aki_TMTPro18x_K_F6 138.25 91.049 80257 63036 66184 69069 68979 73389 77765 77983 90392 88851 83456 77840 91744 72826 80507 99486 80647 80301 74085 57778 68459 69351 71691 74021 78290 79625 91127 88880 86273 79396 92800 76703 82178 98421 77159 76475 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268750000 8344 3569 7897 15860;15861;15862 12737;12738 12737 2 9606 Homo sapiens -0.018315144273856276 FEELCSDLFR Unmodified 1314.5914 0.59143734 1031;1463 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNV4;Q53FC7;B3KSM6;B2R6X5;A0A384NKX5;P17066;B4DHP5;P48741 HSPA1A;HSPA1B;HEL-S-103;HSPA6;HSPA7 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 0 0 0 4 0 1 62.599 62.604 2 0.00027041 19453 20230619_1883_Aki_TMTPro18x_K_F4 134.26 113.36 58019 48804 53662 76507 64586 79653 78993 77810 89929 81308 84148 81445 95067 77082 74471 106390 83368 91429 53625 44893 55204 74954 66686 80203 79116 79724 90748 82012 87049 82600 95682 81201 76763 105500 79736 86969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79394000 8345 1031;1463 7898 15863 12739 12739 1 9606 Homo sapiens -0.0532747178781392 FEELNADLFR Unmodified 1252.6088 0.60880197 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;P11142-2;Q53HF2;B4E1Q1;A8K7Q2;E9PN89;P54652;A0A024R6B5;A0A384MDT7;B3KUS2 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 0 0 0 4.5 1.12 1 1 1 1 62.125 62.158 2 1.9542E-08 18881 20230619_1885_Aki_TMTPro18x_K_F5 194.06 127.38 1598600 1240900 1312400 1668000 1066900 1587000 1537800 1515900 1814800 2352900 1159500 1363500 1298000 2372800 765340 3202900 733820 2077500 1475500 1139700 1356000 1647600 1144500 1608200 1531300 1575700 1811700 2303700 1227300 1464300 1304200 2451500 800410 3134900 701050 1980200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2 3 2016399999.9999998 8346 3430 7899 15864;15865;15866;15867 12740;12741;12742 12742 3 9606 Homo sapiens -0.0073980819049666025 FEELNMDLFR Oxidation (M) 1328.6071 0.60708741 3429 V9HWB4;P11021;A0A7P0TB36 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 1 0 4 0.816 1 1 1 61.634 61.661 2 0.00036543 18984 20230619_1883_Aki_TMTPro18x_K_F4 123.5 114.18 306020 220420 261340 339290 282840 319840 311600 335060 415670 362690 379730 431830 426820 385850 327270 529060 450270 538760 282420 202840 270000 332390 293200 325090 315740 342030 416030 367280 393570 433850 429720 406960 342490 529220 430240 511290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 367110000 8347 3429 7900 15868;15869;15870 12743 12743 2049 1 9606 Homo sapiens -0.044071852707475045 FEELNMDLFR Unmodified 1312.6122 0.61217279 3429 V9HWB4;P11021;A0A7P0TB36 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 4.5 0.5 1 1 63.396 63.422 2 1.9901E-09 19494 20230619_1885_Aki_TMTPro18x_K_F5 202.05 161.7 515480 324260 352470 482540 274130 498370 442750 512420 731540 596320 603820 867230 824120 794490 474420 1161300 974330 1131400 474710 298450 371490 474180 298020 502340 445500 524730 723440 606780 636400 865820 818880 840610 520040 1157100 928490 1074300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1087500000 8348 3429 7900 15871;15872 12744;12745;12746 12745 3 9606 Homo sapiens -0.031628814081386736 FEEMFASR Unmodified 1015.4433 0.44331654 4432 Q9BTL3 FAM103A1 RNMT-activating mini protein yes yes 0 0 0 5.5 0.5 1 1 55.555 55.625 2 0.033806 16097 20230619_1885_Aki_TMTPro18x_K_F5 76.679 67.734 54448 49404 54187 55096 57714 68833 62897 62366 76385 71804 66027 62360 68686 60776 67123 79284 68727 75748 50379 45267 55135 55369 59865 68414 63528 64394 76656 71799 68331 63710 69966 63721 68443 79139 65791 71957 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33114000 8349 4432 7901 15873;15874 12747 12747 1 9606 Homo sapiens -0.06378738250975857 FEENTYCFGR Unmodified 1321.5397 0.53973612 4531 Q9H845;Q9H9W4;H0Y8Z9;Q9BUX5;A0A7P0T8U3;A0A7P0T871;A0A7P0T7Z1 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 0 4 0 1 50.234 50.267 2 0.0029492 14107 20230619_1883_Aki_TMTPro18x_K_F4 120.33 113.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8350 4531 7902 15875 12748 12748 1 9606 Homo sapiens -0.1081721548173391 FEEQGDFESEK Unmodified 1343.5517 0.5517406 662 F8VUA7;F8VQX7;Q641R2;A0A024RBB8;Q5HYM3;Q9BZF1-3;Q9BZF1-2;Q9BZF1;Q96E43 OSBPL8;DKFZp686C0249 Oxysterol-binding protein;Oxysterol-binding protein-related protein 8 yes no 0 0 0 1 0 1 49.292 49.292 2 0.0023286 14059 20230619_1880_Aki_TMTPro18x_K_F1 113.63 93.843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8351 662 7903 15876 12749 12749 1 9606 Homo sapiens -0.1062932025754435 FEETTADGR Unmodified 1024.4462 0.44615331 2888 E7DVW5;Q01469;I6L8B7 FABP5 Fatty acid-binding protein, epidermal yes no 0 0 0 1.5 0.5 1 1 37.395 37.425 2 0.0033396 8930 20230619_1880_Aki_TMTPro18x_K_F1 98.009 75.269 147820 89139 188090 199390 219430 296370 212400 256520 263560 216080 293260 332410 341200 324360 242810 161010 368310 363750 136770 82560 188340 193310 225650 291000 216300 263580 266600 224220 301720 331540 342330 326320 255060 176110 351150 343360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 902520000 8352 2888 7904 15877;15878 12750 12750 1 9606 Homo sapiens -0.0650919159248815 FEETTADGRK Unmodified 1152.5411 0.54111633 2888 E7DVW5;Q01469;I6L8B7 FABP5 Fatty acid-binding protein, epidermal yes no 0 0 1 3.5 0.5 1 1 37.267 37.315 3 3.1862E-07 8552 20230619_1882_Aki_TMTPro18x_K_F3 180.09 126.32 196630 95466 233560 236140 281650 308330 245720 303460 304920 242740 344300 377380 368800 342300 282860 210370 474820 413000 181640 88697 234910 227610 287750 305880 251900 308560 308590 252760 352580 375540 371890 347390 299250 225150 452020 390350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1552499999.9999998 8353 2888 7905 15879;15880 12751;12752 12751 2 9606 Homo sapiens -0.029052581213136364 FEFNQSLGQPEK Unmodified 1422.6779 0.67794416 1820 G3V1N5;B4E3L3;A0A8V8TLZ9;Q96RU2-2;Q96RU2;H0YG96;Q96RU2-3 USP28 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 28 yes no 0 0 0 6 0 1 55.101 55.177 3 1.6098E-05 16090 20230619_1886_Aki_TMTPro18x_K_F6 128.54 105.55 29660 26541 28435 36772 29374 39734 38103 33188 43417 35750 32859 33547 35379 30598 35577 41690 39200 39816 27433 24373 29068 36306 30733 39777 38050 34448 43493 35951 34334 34068 36052 32245 36408 41591 37476 37835 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42164000 8354 1820 7906 15881 12753 12753 1 9606 Homo sapiens -0.01648768961604219 FEGAIYR Unmodified 854.42865 0.42865276 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 6 0 1 45.81 45.896 2 0.040071 12073 20230619_1886_Aki_TMTPro18x_K_F6 90.706 60.287 259290 202290 213110 232120 283980 418210 261880 272780 518760 199940 183870 190710 198020 160200 216510 221660 210590 180530 239330 185500 221640 234280 290280 405120 272910 286610 499600 206550 205040 193080 202660 169480 219530 219470 201340 172020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188820000 8355 3488 7907 15882 12754 12754 1 9606 Homo sapiens -0.004384423368151147 FEGDTGLIVR Unmodified 1105.5768 0.57677356 2503 B4DJK4;B4E0Q4;B4DZJ7;O00267-2;O00267 SUPT5H Transcription elongation factor SPT5 yes no 0 0 0 3.5 0.5 1 1 52.23 52.273 2 0.0018897 14979 20230619_1883_Aki_TMTPro18x_K_F4 100.25 72.363 107410 76318 86951 110920 87370 101510 96408 110850 113640 106620 135530 123930 131960 102140 116560 119550 144460 144060 99078 70185 90179 109000 91078 103520 97284 112490 115600 108490 137770 124360 134000 107080 120350 121210 137940 136570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110170000 8356 2503 7908 15883;15884 12755 12755 1 9606 Homo sapiens 0.028208241263882883 FEGEPATHTQPGVQLQSNTYDLQESNVR Unmodified 3144.4748 0.47483427 3875 Q14141;Q541S4;Q548C9;B1AMS2;Q6B514;B4DZW0;Q8NFH9;Q14141-2;Q14141-4;B4DPT4;Q6NT82;B4E049;Q8NFI2;Q8NFI0;Q14141-3;Q8NFI1 SEPT6 Septin-6 yes no 0 0 0 4 0 2 49.691 49.726 3;4 1.3481E-49 13834 20230619_1883_Aki_TMTPro18x_K_F4 225.88 215.76 42149 34512 38943 44921 41062 39793 46300 49304 50059 57980 47122 56751 63677 49649 48019 75174 58949 61375 38949 31681 39889 44446 42585 40860 46505 49936 50749 58062 49267 57426 63703 52798 49860 74275 56314 58431 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 344590000 8357 3875 7909 15885;15886 12756;12757 12757 2 9606 Homo sapiens -0.011624157562891924 FEGGDRDLEHLSK Unmodified 1501.7161 0.71612058 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 1 3.5 0.5 1 1 44.015 44.072 4 0.00024352 11318 20230619_1883_Aki_TMTPro18x_K_F4 101.32 63.895 62599 51959 71534 78717 87712 101690 89345 90623 70598 78794 89618 110350 99406 71015 78885 83689 87338 143770 57957 47777 72227 77548 89819 100770 89441 93031 73797 81159 91622 109180 100060 75366 81088 87214 83873 135710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162680000 8358 909 7910 15887;15888 12758 12758 1 9606 Homo sapiens -0.014668830469190652 FEGLTVLK Unmodified 905.52222 0.52221879 4203 Q8IVL6;Q8IVL6-2 LEPREL2 Prolyl 3-hydroxylase 3 no no 0 0 0 1 0 1 60.062 60.062 2 0.003949 18562 20230619_1880_Aki_TMTPro18x_K_F1 127.56 64.85 62947 52748 55960 57660 58407 72694 68100 71282 85716 66652 69666 65967 69986 59645 81149 77409 70121 77403 58161 48335 57490 58050 60842 72324 68637 72767 85622 67626 72253 66832 71946 62678 81696 77515 67248 73491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147060000 8359 4203 7911 15889 12759 12759 1 9606 Homo sapiens 0.0656785704561571 FEGNRPDGPRPR Unmodified 1396.696 0.69599427 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 2 7.5 0.5 1 1 29.623 29.684 4 0.0016509 5227 20230619_1887_Aki_TMTPro18x_K_F7 69.815 56.153 19789 12614 11815 13255 19957 17491 17764 16567 18665 17197 17850 17188 20545 18103 15739 21090 22289 17020 18212 11568 12791 13394 20010 17361 18056 17003 18938 17353 18462 17492 20666 18792 16478 20905 21226 16228 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17173000 8360 3610 7912 15890;15891 12760 12760 1 9606 Homo sapiens 0.013514108037725236 FEGPQVQDGR Unmodified 1131.5309 0.530886 3330 O94766;Q5U676;B4DNL8;O94766-2;G3V150 B3GAT3 Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 yes no 0 0 0 2.5 0.5 1 1 40.893 40.959 2 7.6331E-11 9998 20230619_1882_Aki_TMTPro18x_K_F3 167.93 153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8361 3330 7913 15892;15893 12761;12762 12762 2 9606 Homo sapiens -0.029618210558510327 FEGPYTDFTPWTTEEQK Unmodified 2074.916 0.91600218 4403 Q99543-2;Q99543;Q08AR5 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes no 0 0 0 4 0 1 62.861 62.867 3 0.014342 19574 20230619_1883_Aki_TMTPro18x_K_F4 57.703 42.548 15763 13161 12644 17423 12270 17219 15087 15007 18988 19037 17823 18531 19345 18012 15824 18949 22455 23739 14553 12083 13131 17230 12893 17366 15167 15597 19083 19014 18408 18810 19546 18650 16536 19285 21429 22492 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16288000 8362 4403 7914 15894 12763 12763 1 9606 Homo sapiens -0.07845917680424463 FEGRPVPDGDAK Unmodified 1286.6255 0.62551466 1908 A1X283;G3V144;A0A1B0GUF2 SH3PXD2B SH3 and PX domain-containing protein 2B yes no 0 0 1 3.5 0.5 1 1 40.706 40.757 3 0.042296 9869 20230619_1883_Aki_TMTPro18x_K_F4 51.463 31.805 103820 70154 101680 117770 165890 178320 145760 138820 195040 141370 134790 154030 157060 125500 145760 162250 162490 147600 95880 64648 104550 115680 166740 174750 149530 144590 193440 143270 142240 154790 159050 132340 149420 161600 155200 140400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111280000 8363 1908 7915 15895;15896 12764 12764 1 9606 Homo sapiens -0.006333073045425408 FEGTTSLGEVR Unmodified 1194.5881 0.58806652 252 Q4G0F5;A0A024R3L9 VPS26B Vacuolar protein sorting-associated protein 26B yes no 0 0 0 3.5 0.5 1 1 47.391 47.452 2 7.5498E-12 12813 20230619_1883_Aki_TMTPro18x_K_F4 200.09 176.66 404800 332330 392470 448550 433590 469210 503920 457040 541370 568370 676630 615390 645230 566290 583370 614580 723780 710290 374230 305180 400720 443580 448900 472610 505120 470920 554710 569880 686020 621160 656750 588400 602200 622100 691050 673670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 441330000 8364 252 7916 15897;15898 12765;12766 12766 2 9606 Homo sapiens -0.001443985701598649 FEHCNFNDVTTR Unmodified 1538.6572 0.6572255 1379 A0A3Q8TLE1;A0A3G2LMK5;A0A3G2LMK3;A0A3G2LMJ8;E9PNW4;A0A2U3TZL5;Q6FHM9;P13987;P13987-2;A0A3G2LMK2 CD59 CD59 glycoprotein yes no 0 0 0 4.5 0.5 1 1 41.473 41.537 3 2.8862E-10 10180 20230619_1883_Aki_TMTPro18x_K_F4 188.48 168.64 109060 74006 113160 120480 141020 148490 123960 151750 171310 122540 136530 141070 148470 127770 131300 138390 151100 154640 100770 68169 115050 118160 143840 148030 127490 153920 170340 126050 142250 141950 150370 132810 134940 139800 144400 146690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 543060000 8365 1379 7917 15899;15900 12767;12768 12767 2 9606 Homo sapiens -0.09055682612915916 FEHQEWK Unmodified 1002.4559 0.45593014 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;B3KMI9 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 0 5 0 1 42.745 42.827 3 0.0014094 10699 20230619_1885_Aki_TMTPro18x_K_F5 138.54 107.97 145310 78219 151270 156460 168010 195290 174390 178500 220660 209180 203970 194170 220280 172820 191020 182940 208810 203170 134120 72352 153470 151940 173480 193980 176900 184270 221560 209360 210680 197010 222820 179640 195690 184850 199580 192780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179370000 8366 4661 7918 15901 12769 12769 1 9606 Homo sapiens -0.04519958796424817 FEIPYFTTSGIQVR Unmodified 1656.8512 0.8511575 460 Q9BXS5-2;A0A024R7K8;Q9BXS5;B3KNH5;E7ENJ6;B4DN99;Q59EK3;B4DDG7;K7EJL1 AP1M1 AP-1 complex subunit mu-1 yes no 0 0 0 3.5 0.5 1 1 63.642 63.662 2 3.2409E-11 19989 20230619_1882_Aki_TMTPro18x_K_F3 178.53 140.8 26852 21239 23477 30139 21249 27429 27283 26621 27776 30150 32315 32895 32071 28944 31373 33316 35384 38674 24799 19518 24142 29652 22445 27907 27181 27362 28455 30359 32941 33136 32719 30219 32147 33702 33839 36664 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52407000 8367 460 7919 15902;15903 12770 12770 1 9606 Homo sapiens 0.04900597094842851 FEIWDTAGQER Unmodified 1350.6204 0.62042929 164;203;642 A0A024R1U4;P51148;P51148-2;K7ERI8;K7ERQ8;F8VVK3;K7ENY4;F8VVZ0;F8VUA5;F8VWU4;A0A024R2K1;P20339-2;P20339;A0A024RB09;P61020-2;P61020;Q6FI54 RAB5C;RAB5B;RAB5A Ras-related protein Rab-5C;Ras-related protein Rab-5A;Ras-related protein Rab-5B no no 0 0 0 3.5 0.5 1 1 57.362 57.381 2 1.5638E-16 17359 20230619_1882_Aki_TMTPro18x_K_F3 256.91 236.63 148990 112470 130980 161200 137780 182550 166990 164080 210740 195760 187920 211890 231230 195650 178770 251890 229290 272030 137560 103390 134890 158960 143710 182420 167980 169760 211340 196710 195890 213830 232180 205370 185920 253110 219190 258000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 325420000 8368 164;203;642 7920 15904;15905 12771 12771 1 9606 Homo sapiens -0.04085611167147363 FEKPLEEK Unmodified 1018.5335 0.53351176 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 1 5 0.816 1 1 1 46.413 46.481 3 0.015678 12245 20230619_1885_Aki_TMTPro18x_K_F5 72.325 35.944 99520 82076 95840 95745 119620 114410 117700 103830 103510 102330 119940 76701 86756 57366 127810 53452 56988 34857 92000 75259 98006 95836 122120 114090 118340 106780 106890 102710 120630 78432 91318 59674 124920 53011 55057 33386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96336000 8369 4246 7921 15906;15907;15908 12772 12772 1 9606 Homo sapiens 0.024986343491036678 FELAVDAVHR Unmodified 1155.6037 0.60365701 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;A0A024QZ91;A0A024QZC0;Q8WWM7-7;H3BSK9;H3BUE3;H3BSQ5 ATXN2L Ataxin-2-like protein yes no 0 0 0 5.5 0.5 1 1 49.632 49.709 3 1.1918E-19 13611 20230619_1885_Aki_TMTPro18x_K_F5 210.64 180.03 88599 63663 81104 78883 73480 85033 91778 90177 104850 99180 97431 99597 105260 92869 97345 115010 109440 106240 81805 58442 82893 78523 77476 85628 91886 92005 105780 99776 100680 100880 106840 97162 99890 114680 104570 101010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 175310000 8370 4285 7922 15909;15910 12773;12774 12773 2 9606 Homo sapiens 0.03207932737564079 FELDTSER Unmodified 995.45599 0.45598972 1878 B2RE46;A0A994J5J1;P04844-2;P04844;B4DJL0 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 0 0 1.5 0.5 1 1 46.316 46.395 2 1.1769E-15 12769 20230619_1881_Aki_TMTPro18x_K_F2 243.74 207.86 398810 331500 378350 435810 452370 571160 499760 486220 628420 508340 614440 650660 673210 577750 528000 628180 639560 710190 368650 304330 387660 433120 466080 565050 504970 503220 631870 517260 633700 651660 678420 601030 546190 634780 611340 673410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 565200000 8371 1878 7923 15911;15912 12775;12776 12776 2 9606 Homo sapiens -0.04192003587081672 FELLTNFPR Unmodified 1135.6026 0.60259438 3336 O94888;C9JAT7;B4E126 UBXN7 UBX domain-containing protein 7 yes no 0 0 0 3 0 1 62.631 62.662 3 0.0036466 19512 20230619_1882_Aki_TMTPro18x_K_F3 83.998 58.261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8372 3336 7924 15913 12777 12777 1 9606 Homo sapiens 0.04021718368653637 FELSENCSERPGLR Unmodified 1692.789 0.78896795 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;O95654 DCTN1;DKFZp686I0746;DKFZp686E0752 Dynactin subunit 1 yes no 0 0 1 4.5 0.5 1 1 44.267 44.329 3 2.9495E-22 11393 20230619_1883_Aki_TMTPro18x_K_F4 185.66 149.89 205650 171830 200750 215730 194670 214270 244030 234320 238690 283080 240450 230430 290560 227830 224760 323170 281480 267570 190140 157660 204360 214270 203940 217250 243030 239280 243870 281770 248710 236350 291760 240200 233380 319810 268670 254780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 299190000 8373 1717 7925 15914;15915 12778 12778 1 9606 Homo sapiens -0.029714973158206703 FELTGIPPAPR Unmodified 1196.6554 0.65535823 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96BE0;E9PS65;Q96H53;E9PM13 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 0 0 1 0 1 56.58 56.58 2 0.0011614 17107 20230619_1880_Aki_TMTPro18x_K_F1 100.25 66.888 77534 67824 81034 84182 67630 73854 87244 81051 89434 104640 105500 87902 107150 86989 76386 135510 120430 118390 71752 62215 81847 83555 71799 75648 86923 82961 91686 103950 107400 90107 107860 92342 80977 134240 114780 112640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85646000 8374 3430 7926 15916 12779 12779 1 9606 Homo sapiens 0.06489676431465341 FENADLNDTSR Unmodified 1280.5633 0.56330834 2299 B7ZKU7;B2RBN7;Q9H6U6-2;Q9H6U6-7;Q9H6U6;Q9H6U6-3;Q9H6U6-8;K7EJU7;Q05D99 BCAS3 Breast carcinoma-amplified sequence 3 yes no 0 0 0 1.5 0.5 1 1 43.108 43.149 2 0.0085962 11289 20230619_1881_Aki_TMTPro18x_K_F2 76.942 60.002 32511 60139 42260 43434 58295 61151 44417 47989 46195 48104 54698 67024 53864 37338 63618 58566 66331 74499 30374 54831 42358 45531 58855 60271 45674 49928 47333 49157 55797 66144 55409 40665 64643 59406 63495 70561 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41698000 8375 2299 7927 15917;15918 12780 12780 1 9606 Homo sapiens -0.06575078443529492 FEPEYSQIK Unmodified 1139.5499 0.5498901 4130 Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A8I5KSP1;A0A0B4J210;E5RH50;H0YC33 LARP1 La-related protein 1 yes no 0 0 0 5 0 1 51.751 51.825 2 0.0001897 14562 20230619_1885_Aki_TMTPro18x_K_F5 162.97 95.213 71030 58605 66092 74215 52356 71679 60181 65486 80664 83238 84907 94393 96475 84794 74617 108190 108200 107560 65645 53781 67398 73621 55841 72502 60909 67817 81215 83519 87456 94997 97114 89000 78298 108210 103190 102170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73834000 8376 4130 7928 15919 12781 12781 1 9606 Homo sapiens -0.014302844848316454 FEPIHGNFLLTGAYDNTAK Unmodified 2107.0375 0.037454724 2249 Q6IAP9;Q5T1M7;B2R7V4;Q59EL4;O43172-2;O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes no 0 0 0 4.5 3.5 1 1 60.324 60.342 3;4 1.867E-11 18637 20230619_1880_Aki_TMTPro18x_K_F1 144.53 130.8 93607 82533 90260 97508 88035 102290 99473 89240 107080 115620 112690 111290 114710 99719 106720 127600 121280 134100 86572 75669 91985 97306 91969 102780 99872 92818 108950 115310 115440 112790 116660 104730 109580 128070 115990 127250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199330000 8377 2249 7929 15920;15921 12782;12783 12782 2 9606 Homo sapiens 0.028217494727414305 FEPPQSDSDGQR Unmodified 1361.5848 0.58477206 3231 O15042-2;O15042;E7ET15;E7EW00;H0Y8D9;B4DK81 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 0 0 0 1 0 1 39.818 39.818 2 1.0059E-05 9996 20230619_1880_Aki_TMTPro18x_K_F1 143.24 126.66 19337 13396 16529 20471 24004 25291 21785 22334 25355 20638 24870 24865 26664 20455 22278 20500 28479 25122 17841 12328 17160 20139 24283 25133 22201 22975 25597 21086 25614 24899 26937 21263 23060 20867 27165 23824 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10950000 8378 3231 7930 15922 12784 12784 1 9606 Homo sapiens -0.08155693414801135 FEPPQSDSDGQRR Unmodified 1517.6859 0.68588309 3231 O15042-2;O15042;E7ET15;E7EW00;H0Y8D9;B4DK81 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 0 0 1 2.5 0.5 1 1 34.814 34.873 3 5.1786E-06 7530 20230619_1882_Aki_TMTPro18x_K_F3 128.21 90.6 68729 53863 65352 62556 78889 81649 72144 75064 88525 84825 86202 77044 86771 66781 77295 88457 97639 80822 63509 49397 66843 62732 80681 80987 73653 77364 89187 84979 88505 78260 88066 70402 79942 88085 93107 76908 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72846000 8379 3231 7931 15923;15924 12785;12786 12786 2 9606 Homo sapiens -0.05225241712105344 FEPYANPTK Unmodified 1065.5131 0.51311067 3631 P52272-2;P52272;A0A087X0X3;M0R019;M0R2T0;B4DEG4;M0R0N3;M0QYQ7;M0R0Y6 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 7 0.816 2 2 2 48.551 48.629 2;3 0.00049454 12915 20230619_1887_Aki_TMTPro18x_K_F7 147.2 73.951 467250 351530 383620 476320 520740 654320 576710 529420 661680 600930 600340 630970 678000 585720 545620 715200 663900 636910 431200 322940 399480 472760 532450 644930 580480 551410 666840 604730 622340 637730 683410 612330 564610 711800 633890 605860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1898199999.9999998 8380 3631 7932 15925;15926;15927;15928;15929;15930 12787;12788;12789 12788 3 9606 Homo sapiens -0.017025363107450175 FEQLCLQQQEK Unmodified 1449.6922 0.69221402 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 0 6 0 1 52.866 52.943 3 2.1026E-05 15190 20230619_1886_Aki_TMTPro18x_K_F6 140.14 81.665 68059 53978 61816 65376 61171 74289 69026 68940 86981 86419 79946 80418 97457 74780 77095 99748 99814 89324 62872 49520 63335 65207 63897 74312 69699 71256 87360 86235 83106 81739 97915 78675 80127 99185 95209 84989 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44141000 8381 1566 7933 15931 12790 12790 1 9606 Homo sapiens -0.014644398049540541 FERPDGSHFDVR Unmodified 1460.6797 0.6796755 2466 Q9Y2S7;B4DEM9;Q9UG21 POLDIP2;DKFZp586F1524 Polymerase delta-interacting protein 2 yes no 0 0 1 4.5 0.5 1 1 39.655 39.721 4 0.00047825 9392 20230619_1885_Aki_TMTPro18x_K_F5 98.337 78.733 103900 79705 88087 94479 98911 105270 109780 110730 142700 102780 106290 96317 110110 93383 100180 117860 111130 106300 95919 73117 91001 94367 102230 105770 111030 112510 141940 104180 110860 98062 111810 97712 102740 117350 106180 101100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41315000 8382 2466 7934 15932;15933 12791;12792 12792 2 9606 Homo sapiens -0.03223715152967088 FESDPATHNEPGVR Unmodified 1554.7063 0.70628418 1492 D6RGI3;A0A384P5S0;D6RER5;Q9NVA2;Q9NVA2-2;D6RDU5;D6RDP1;D6R9Y6 SEPT11 Septin-11 yes no 0 0 0 2.5 0.5 1 1 36.774 36.831 3 3.0727E-05 8422 20230619_1881_Aki_TMTPro18x_K_F2 93.649 77.512 158420 118980 136670 158730 182760 185990 162760 163190 201100 173300 211780 209590 204000 165680 172630 196060 227110 199060 146240 109290 141440 157320 185640 185500 166450 168580 203030 175760 216370 209670 206950 173960 179210 196650 216580 189140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87865000 8383 1492 7935 15934;15935 12793 12793 1 9606 Homo sapiens -0.04888071052323539 FESFEISK Unmodified 985.47566 0.47566253 804 Q9NQ66;A0A0D9SF51;Q9NQ66-2;A0A087WT80;A0A087WW73;A0A1B0GWB6;A0A0D9SG17;B3KXN8;B4DRC6;H0YCJ2 PLCB1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1;Phosphoinositide phospholipase C yes no 0 0 0 6 0 1 57.318 57.39 3 0.023308 17063 20230619_1886_Aki_TMTPro18x_K_F6 58.23 51.326 19459 21268 22568 22790 21343 25225 25180 25069 25380 31883 34751 33686 36838 29281 27120 37109 32233 39785 18055 19468 22654 22934 22367 25325 25185 25802 26242 31896 35286 33977 37051 30778 28089 37282 30843 37732 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12438000 8384 804 7936 15936 12794 12794 1 9606 Homo sapiens -0.017656275763329177 FESIAIAQEK Unmodified 1134.5921 0.59208927 1884 A0A994J7M8;Q6PI78 TMEM65 Transmembrane protein 65 yes no 0 0 0 6 0 1 54.933 55.009 3 0.015732 16053 20230619_1886_Aki_TMTPro18x_K_F6 64.906 46.234 41093 32385 38171 35292 34220 42396 46960 56897 47039 39595 38483 33771 40106 37647 37010 38321 40354 45408 37967 29682 38954 35539 36229 42650 46635 56605 47552 40756 39932 34712 40764 38748 37882 38892 38613 43035 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33009000 8385 1884 7937 15937 12795 12795 1 9606 Homo sapiens 0.030176909235706262 FESILPR Unmodified 860.4756 0.47560295 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 1 0 1 54.726 54.726 2 0.018314 16224 20230619_1880_Aki_TMTPro18x_K_F1 107.43 40.436 158900 110230 129710 143340 129710 154110 153720 151210 186000 182120 161300 173180 198170 152300 140140 207750 196950 197490 146570 101260 134290 142160 135580 154910 154570 155500 186770 182140 168280 175490 198280 160800 147030 207090 187890 187680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 665910000 8386 3811 7938 15938 12796;12797 12796 2 9606 Homo sapiens 0.039784172143299656 FESLEPEMNNQASR Unmodified 1650.7308 0.73078437 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 2 2 51.524 51.579 2;3 4.0926E-16 14832 20230619_1882_Aki_TMTPro18x_K_F3 261.72 234.94 127480 101220 121770 127720 129010 142990 147550 135100 183510 149130 148210 153870 168200 122660 139730 168610 161350 159420 117820 92899 124330 127000 133990 143250 148740 138980 183430 150180 154610 154950 169580 130060 143940 168090 154150 151520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 230850000 8387 2337;3778;3779 7939 15939;15940;15941;15942 12798;12799 12799 2 9606 Homo sapiens -0.0685517896104102 FESLEPEMNNQASR Oxidation (M) 1666.7257 0.72569899 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 1 0 2 0 1 46.891 46.967 2 0.068566 13038 20230619_1881_Aki_TMTPro18x_K_F2 68.107 58.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8388 2337;3778;3779 7939 15943 12800 12800 1446 1 9606 Homo sapiens -0.08099482823672588 FESPESQASAEQPEM Unmodified 1665.6828 0.68283113 2532 B4DLT1;O75436;A8K3C1 VPS26A Vacuolar protein sorting-associated protein 26A yes no 0 0 0 1 0 1 53.816 53.816 2 3.855E-10 15912 20230619_1880_Aki_TMTPro18x_K_F1 156.48 156.48 8011 6384.8 5289.7 5825.7 5353.9 6487.5 7955.1 8267.3 7944.5 8260 7614.7 6157.6 10520 9031.8 8795.5 10851 7864.3 9854.8 7385.5 5843.2 5606.4 5945.6 5635.3 6553.2 7868.2 8317.4 8085.6 8285.2 7946.7 6457.4 10561 9319.2 8935 10813 7547.3 9363.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41222000 8389 2532 7940 15944 12801 12801 1 9606 Homo sapiens -0.12338297671794862 FESPEVAER Unmodified 1062.4982 0.49818889 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;Q8TCM5 HNRNPM;ORF;HNRPM;DKFZp547H118 Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 2 0.816 1 1 1 42.344 42.392 2 3.9634E-08 11120 20230619_1880_Aki_TMTPro18x_K_F1 203.02 166.62 1222600 969590 994570 1157300 1382800 1556800 1362000 1307500 1596500 1399100 1475200 1443500 1588100 1281400 1204700 1722400 1680000 1531400 1128500 889390 1036200 1158200 1406100 1538200 1381100 1355300 1608200 1411100 1523600 1458800 1599100 1350400 1260800 1711500 1601800 1457100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1897599999.9999998 8390 3631 7941 15945;15946;15947 12802;12803;12804 12802 3 9606 Homo sapiens -0.030560281787074928 FETFCLDPSLVTK Unmodified 1555.7592 0.75923095 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;Q96K97;Q9UHB9-3 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 0 4.5 3.5 1 1 63.22 63.231 3 5.1053E-05 19797 20230619_1880_Aki_TMTPro18x_K_F1 111.79 107.95 293780 234070 280360 357220 284220 316660 373470 312630 337440 335910 315300 332840 420360 325900 338730 386900 362960 431790 271500 215290 286510 349850 297160 323070 370100 320610 345090 338170 329300 337830 421600 339890 347500 390170 347520 409390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 505320000 8391 4661 7942 15948;15949 12805;12806;12807 12805 3 9606 Homo sapiens 0.0035817068612686853 FEVAQVESLR Unmodified 1176.6139 0.61388734 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 4.5 0.5 1 1 53.811 53.853 2 0.00021699 15747 20230619_1883_Aki_TMTPro18x_K_F4 157.75 124.8 98317 91348 98051 106410 102190 123490 106880 101240 128860 115020 110320 110310 132730 94808 101000 122270 160300 126900 90986 83725 99750 106450 106050 123060 108160 105360 129310 115410 115010 111680 133210 99866 106630 122620 152570 120600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 593920000 8392 3440 7943 15950;15951 12808 12808 1 9606 Homo sapiens 0.032644956721242124 FEVGDIMLIR Unmodified 1191.6322 0.63217995 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;A0A8V8TL37;G3V393 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 0 0 7.5 0.5 1 1 63.345 63.368 2 4.9874E-06 19265 20230619_1888_Aki_TMTPro18x_K_F8 168.26 121.18 229310 189290 217080 213970 158660 215920 208850 200120 234650 270930 242340 256860 275710 231610 266110 296190 261220 296350 211960 173510 220680 214170 171150 217800 208570 207480 238140 269550 249880 260480 279840 243210 270680 296530 250230 281350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278410000 8393 3373 7944 15952;15953 12809;12810 12810 2 9606 Homo sapiens 0.0440291432248614 FEVNNTILHPEIVECR Unmodified 1968.9727 0.97274598 1198 J3K000;P12955;A0A8V8TLL9;A0A8V8TLP4;A0A140VJR2;A0A494C165;P12955-3;K7ES25;A0A8V8TLR1;A0A494C194;A0A8V8TN48;A0A8V8TLP2;A0A8V8TLN7;A0A8V8TLR6 PEPD Xaa-Pro dipeptidase yes no 0 0 0 5.5 0.5 1 1 55.334 55.404 3 9.9175E-34 16010 20230619_1885_Aki_TMTPro18x_K_F5 248.54 228.93 72021 58024 68073 68417 58828 88936 72907 63936 122800 91198 95205 104430 111140 108710 99370 111090 113000 139200 66559 53215 69373 68501 62515 87752 74191 67803 121070 91256 99721 105540 112490 112100 102080 113140 108170 131820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 217640000 8394 1198 7945 15954;15955 12811;12812 12811 2 9606 Homo sapiens 0.027018513950679335 FEVSPSYVK Unmodified 1054.5335 0.53351176 940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370;D7EZH4 SMARCA1 Probable global transcription activator SNF2L1 yes no 0 0 0 7.5 0.5 1 1 52.755 52.828 2 0.00052075 14776 20230619_1888_Aki_TMTPro18x_K_F8 149.82 106.75 65391 59198 65145 75741 70768 84372 78625 76279 93019 65840 70571 61580 62763 62427 71286 73310 73562 63474 60504 54313 66360 75220 73336 84452 79242 78222 92954 67041 73082 62803 64788 64890 72473 72951 70292 60430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60497000 8395 940 7946 15956;15957 12813 12813 1 9606 Homo sapiens 0.008426343491009902 FFCFQVLEHQVK Unmodified 1580.781 0.78096945 2146 A8KA19;O43592;F8WDU6 XPOT Exportin-T yes no 0 0 0 2.5 0.5 1 1 61.458 61.479 3 9.9308E-10 19025 20230619_1882_Aki_TMTPro18x_K_F3 174.24 153.58 73646 59237 79826 78409 52548 75301 87273 85129 105590 70359 68487 82699 86462 65848 90935 94307 81248 97187 68138 54392 80191 77588 57807 76544 86535 85920 104930 72321 72934 82835 87844 70016 91879 94455 77942 92219 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127880000 8396 2146 7947 15958;15959 12814 12814 1 9606 Homo sapiens 0.013810202253580428 FFCTTSIPK Unmodified 1099.5372 0.53721693 2712 B7ZLK2;B7ZLK1;Q86YS7;Q86YS7-2;Q86YS7-3;Q86YS7-4;A0A024RB03;Q86YS7-5 KIAA0528;C2CD5 C2 domain-containing protein 5 yes no 0 0 0 4 0 1 57.074 57.08 3 0.012846 17118 20230619_1883_Aki_TMTPro18x_K_F4 67.993 34.032 20208 18718 22477 19303 16842 22010 24092 21777 28225 20510 21318 19806 24849 21611 21546 23589 26848 29330 18719 17137 22547 19501 18157 22045 23995 22234 28217 20796 22342 20215 25105 22349 22271 23986 25654 27788 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26397000 8397 2712 7948 15960 12815 12815 1 9606 Homo sapiens -0.008570191487251577 FFDANYDGK Unmodified 1075.4611 0.4610751 2536 Q15691;B4DM33;A2VCR0 MAPRE1 Microtubule-associated protein RP/EB family member 1 no no 0 0 0 5.5 0.5 1 1 55.355 55.426 2 9.9382E-06 16008 20230619_1885_Aki_TMTPro18x_K_F5 173.75 96.921 514470 419070 457510 490840 408700 514670 491600 495720 569500 657210 649780 655360 768290 610700 578370 885450 745770 834380 475270 384290 469030 490200 431340 518140 493470 512050 579490 655390 667920 664310 771170 646120 602450 881490 712540 792720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 721430000 8398 2536 7949 15961;15962 12816;12817 12816 2 9606 Homo sapiens -0.0736369972448756 FFDDPMLLELAK Oxidation (M) 1453.7163 0.71630351 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;K7EP67 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 1 0 6.5 0.5 1 1 64.304 64.342 3 0.00051692 20081 20230619_1886_Aki_TMTPro18x_K_F6 91.961 79.083 42486 57271 69262 46607 104520 58986 74375 98303 54560 49371 49964 38345 50021 38706 86742 43503 41490 40563 39649 52288 68452 48268 104380 59797 76215 96266 56581 52102 51509 39521 52718 40196 84822 43620 40128 38562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124260000 8399 2436 7950 15963;15964 12818 12818 1503 1 9606 Homo sapiens 0.007594006287490629 FFDDPMLLELAK Unmodified 1437.7214 0.72138888 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;K7EP67 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 7 0 1 65.522 65.547 3 3.5186E-05 20329 20230619_1887_Aki_TMTPro18x_K_F7 99.5 85.821 57996 41582 53632 55764 44724 53158 52697 58978 55679 64437 63067 68461 60555 52982 61242 72170 64638 70980 53552 38204 54722 55122 47412 54068 52813 59986 56891 64908 64298 68783 61926 56166 62515 72115 61856 67406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139580000 8400 2436 7950 15965 12819 12819 1 9606 Homo sapiens 0.020037044913806312 FFDEESYSLLR Unmodified 1404.6561 0.65614609 3625 P51571;A6NLM8 SSR4 Translocon-associated protein subunit delta yes no 0 0 0 3.5 0.5 1 1 62.602 62.62 2 9.8662E-23 19429 20230619_1883_Aki_TMTPro18x_K_F4 244.61 214.47 320780 271980 364420 402700 316970 404220 419050 453020 472550 512920 440590 449700 538890 398240 430190 568030 446120 501710 297020 250000 366200 395860 336040 409460 418370 460870 477530 513070 457850 457730 541290 421720 441030 563940 427070 477020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 224380000 8401 3625 7951 15966;15967 12820 12820 1 9606 Homo sapiens -0.02999573710144432 FFDGELTK Unmodified 955.4651 0.46509784 2030 A8K3S1;P46926;D6RAY7;P46926-2;D6R9P4;D6RFF8;B3KMV2 GNPDA1 Glucosamine-6-phosphate isomerase;Glucosamine-6-phosphate isomerase 1 yes no 0 0 0 5.75 0.829 2 1 1 57.687 57.747 2;3 0.00051934 17146 20230619_1886_Aki_TMTPro18x_K_F6 136.27 111.37 254860 206470 245410 257230 248700 242850 246740 263610 259650 310470 312940 328720 331940 275360 320980 365140 340090 392680 235570 189460 250130 255470 257760 247260 249490 269120 266220 311640 319560 331100 337600 290630 327910 366870 325580 372480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 255780000 8402 2030 7952 15968;15969;15970;15971 12821;12822 12822 2 9606 Homo sapiens -0.014416102307677647 FFDHSGTLVMDAYEPEISR Unmodified 2213.0099 0.0099193444 2451 B4DDB9;E9PI68;Q15005;E9PL01;E9PRB9 SPCS2 Signal peptidase complex subunit 2 yes no 0 0 0 3.5 0.5 1 1 61.158 61.174 3 0.0071498 18810 20230619_1883_Aki_TMTPro18x_K_F4 62.739 53.643 139630 102570 146340 132340 130520 158480 143400 129120 170410 159040 140610 197010 167100 141970 176400 198560 176010 194880 129080 94191 147780 131550 137300 157560 144680 134800 170960 160310 147270 196240 170170 151210 179320 198350 168540 185070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126420000 8403 2451 7953 15972;15973 12823 12823 1 9606 Homo sapiens -0.04806521849832279 FFEDYGLFMR Unmodified 1323.5958 0.59579444 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3;Q5CAQ4;I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 4.5 3.5 1 1 64.284 64.295 2 6.3751E-08 19667 20230619_1888_Aki_TMTPro18x_K_F8 193.41 186.75 69177 51372 67339 64780 43824 70691 57084 64061 69077 81467 72291 85263 82047 75952 94753 87360 93534 105480 63915 47161 68206 64406 47939 70825 57227 66352 69899 81497 74579 86009 84076 79263 96021 88639 89587 99953 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 141870000 8404 1211 7954 15974;15975 12824;12825 12825 2 9606 Homo sapiens -0.053059625742434946 FFEFGSLDQK Unmodified 1216.5764 0.57643921 998 A0A0C4DG68;B7ZL34;Q8TB72-2;Q8TB72-4;Q8TB72-3;Q8TB72 PUM2 Pumilio homolog 2 yes no 0 0 0 7.5 0.5 1 1 62.682 62.713 3 0.00033926 18947 20230619_1888_Aki_TMTPro18x_K_F8 97.456 70.783 83142 65622 79841 92588 79655 82080 93297 92084 96688 102240 87206 96120 106970 86127 97828 108060 104500 111130 76837 60301 81452 91128 83063 84025 93387 93675 98023 102570 90866 97487 108090 90373 100060 108380 99967 105500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193670000 8405 998 7955 15976;15977 12826 12826 1 9606 Homo sapiens -0.023185955934650337 FFEFGSLEQK Unmodified 1230.5921 0.59208927 2590 E9PR38;B4DU15;H0YEH2;Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;H0YDK8;B3KU37;H0YC97;H0YDC5 PUM1 Pumilio homolog 1 yes no 0 0 0 8 0 1 62.645 62.67 2 0.085627 18921 20230619_1888_Aki_TMTPro18x_K_F8 71.425 41.441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8406 2590 7956 15978 12827 12827 1 9606 Homo sapiens -0.01398309076444093 FFEHFIEGGR Unmodified 1237.588 0.58800695 4350 Q96FW1;Q659F9;F5H6Q1;B4DPD5;F5GYN4;F5GYJ8;F5H3F0;B3KUV5;Q96FW1-2;B4E053 OTUB1;DKFZp564E242 Ubiquitin thioesterase OTUB1 yes no 0 0 0 7 0.816 1 1 1 56.974 57.034 3 3.3912E-10 16867 20230619_1886_Aki_TMTPro18x_K_F6 208.63 165.55 166590 155400 155270 174930 151850 177180 164860 186330 174480 194460 190420 200200 221570 178990 200110 231350 202840 237480 154090 142380 158740 175130 158440 179220 165890 189890 178000 196190 196070 202300 224040 188160 204200 231880 194290 225370 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 952430000 8407 4350 7957 15979;15980;15981 12828;12829;12830 12828 3 9606 Homo sapiens -0.021283537794943186 FFEILSPVYR Unmodified 1269.6758 0.67575932 790 Q05397-7;E7ESA6;Q658W2;A0A059VC25;H0YBP1;A0A8Q3WLM4;Q05397;Q05397-5;Q59GN8;Q59GM6;Q05397-2;Q05397-4;Q05397-3;H0YB99 PTK2;DKFZp666O0110;FAK Focal adhesion kinase 1 yes no 0 0 0 4 0 1 64.019 64.027 2 0.0010169 20038 20230619_1883_Aki_TMTPro18x_K_F4 113.71 81.575 29267 21285 26685 28702 23103 26671 29558 26170 31003 32293 37102 33030 34484 28918 31070 39824 38979 42632 27024 19556 27282 28346 24466 27109 29478 26953 31739 32329 37635 33389 35118 30551 32142 39970 37244 40449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19654000 8408 790 7958 15982 12831 12831 1 9606 Homo sapiens 0.05170847091289943 FFENYNQSLEK Unmodified 1417.6514 0.65139506 1819 Q6PGP7;A0A8V8TMA8;A0A8V8TMB2;A0A8V8TLS3;A0A8V8TLT2;A0A8V8TNJ4 TTC37 Tetratricopeptide repeat protein 37 yes no 0 0 0 6 0 1 57.284 57.356 3 5.0734E-07 17020 20230619_1886_Aki_TMTPro18x_K_F6 136.96 106.23 64367 54635 63135 65846 60114 73393 66216 62167 74134 76155 77937 75767 92167 71860 74689 79136 86796 85407 59523 50108 64214 65674 62907 73378 66670 64678 75263 76220 80382 76803 92742 74687 76944 79751 82919 81059 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71355000 8409 1819 7959 15983 12832 12832 1 9606 Homo sapiens -0.040724578529079736 FFESFGDLSSADAILGNPK Unmodified 2013.9684 0.96837211 2797 CON__Q3SX09 yes yes 0 0 0 7 0.816 1 1 1 65.176 65.199 3 4.4185E-31 20016 20230619_1888_Aki_TMTPro18x_K_F8 222.57 221 + 71975 144200 174820 168180 285780 348030 233300 235290 346180 424650 847700 1174900 348170 1113700 378330 543510 729660 1313700 67943 131930 170750 170140 286830 335630 242040 253440 365310 442050 826180 1154900 378320 1117500 404770 598130 698780 1237500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1937399999.9999998 8410 2797 7960 15984;15985;15986 12833;12834;12835 12835 3 9606 Homo sapiens 0.0019466545318209683 FFETSAK Unmodified 828.40177 0.4017693 3687;646 P61026;Q53T70;A0A024RB27;Q504R6;P51153;A0A087WWB9 RAB10;hCG_24991;RAB13 Ras-related protein Rab-10;Ras-related protein Rab-13 no no 0 0 0 7.5 0.5 1 1 50.518 50.597 2 0.003791 13842 20230619_1887_Aki_TMTPro18x_K_F7 152.63 58.47 1599100 1299900 1351100 1445100 1600500 1720900 1660300 1611500 1989200 1860000 1997200 2008900 2115000 1708600 1811900 2380400 2313200 2072300 1476700 1191400 1397400 1451500 1645000 1717300 1680500 1660500 2008100 1871300 2053700 2023500 2140400 1807600 1878500 2362400 2206800 1972400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1461599999.9999998 8411 3687;646 7961 15987;15988 12836;12837 12836 2 9606 Homo sapiens -0.019295509480002693 FFGDSAASMAIK Unmodified 1243.5907 0.59070906 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;B7Z602;A0A024R3G0;J3KTF1;J3QL06;B7Z4E6;A0A8Q3SHP7;A0A0G2JRG7;A0A0G2JRT9;Q9BST8;A0A0G2JR71;A0A0G2JR88 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 2 0 1 60.7 60.712 2 0.028833 18915 20230619_1881_Aki_TMTPro18x_K_F2 68.49 40.282 56064 48990 59429 61548 49533 67303 65429 62673 70766 67020 74035 70636 71279 61683 75403 78194 76947 83732 51889 44945 59975 61201 52745 67479 65227 64478 71891 67618 75683 71277 73038 64801 76707 78612 73654 79445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21024000 8412 874 7962 15989 12838 12838 1 9606 Homo sapiens -0.021342664368376063 FFGDSAASMAIK Oxidation (M) 1259.5856 0.58562368 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;B7Z602;A0A024R3G0;J3KTF1;J3QL06;B7Z4E6;A0A8Q3SHP7;A0A0G2JRG7;A0A0G2JRT9;Q9BST8;A0A0G2JR71;A0A0G2JR88 HYOU1 Hypoxia up-regulated protein 1 yes no 0 1 0 7.5 0.5 1 1 55.518 55.579 3 1.4672E-05 15941 20230619_1888_Aki_TMTPro18x_K_F8 125.23 107.42 123820 101450 102110 121230 154990 159490 150860 144710 165740 106990 108210 100320 100620 81198 145150 109090 110410 99762 114330 93050 106450 121280 156660 158050 152700 147830 165560 110050 113460 101570 105020 85877 144690 108780 105910 94893 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155940000 8413 874 7962 15990;15991 12839 12839 507 1 9606 Homo sapiens -0.033785702994691746 FFGGYVPEMVLTPDDQR Unmodified 1969.9244 0.9243988 2037 A8K492;P56192;B4DF61;H0YIP0 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 64.142 64.187 3 2.7952E-18 19996 20230619_1886_Aki_TMTPro18x_K_F6 171.91 167.81 51853 43649 46826 46772 41396 62246 49383 52102 75035 53324 58887 59429 60501 48947 62038 65006 63504 80962 47917 39990 47923 47197 43837 61505 50121 53946 74262 54067 61255 59722 61763 51724 63162 65939 60867 76665 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153700000 8414 2037 7963 15992;15993 12840 12840 1 9606 Homo sapiens -0.021766422448536105 FFGNLAVMDSPQQICER Unmodified 2010.9292 0.9291666 2051 A8K4T6;Q16401-2;Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes no 0 0 0 8 0 1 62.59 62.615 3 3.6778E-07 18896 20230619_1888_Aki_TMTPro18x_K_F8 125.61 106.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8415 2051 7964 15994 12841 12841 1 9606 Homo sapiens -0.035860813737372155 FFGNSWAETYR Unmodified 1376.6149 0.61494998 3062 H3BLU7;V9HWA2;O43488 AKR7A2;HEL-S-166mP Aflatoxin B1 aldehyde reductase member 2 yes no 0 0 0 2 0.816 1 1 1 59.605 59.619 2 6.97E-06 18465 20230619_1881_Aki_TMTPro18x_K_F2 176.65 145.58 123220 113380 128260 123910 110200 141220 136570 133300 149630 127930 129850 138410 124650 120530 163670 137320 144370 155060 114060 103860 129600 124570 116740 141290 136600 136600 150840 129940 134090 139410 129330 125770 164540 138800 138400 147050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91129000 8416 3062 7965 15995;15996;15997 12842;12843 12842 2 9606 Homo sapiens -0.05829289958978734 FFGQHDR Unmodified 905.4144 0.41439968 862 Q9ULU4-19;Q9ULU4-18;H7C4X9;A0A087WYS3;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-12;Q9ULU4-14;Q9ULU4-21;Q9ULU4-8;Q9ULU4-23;Q9ULU4-15;Q9ULU4-17;Q9ULU4-6;Q9ULU4-3;Q9ULU4-22;A0A087WVZ6;Q5JV90;A0A087WV57;A6H8Y8 ZMYND8;DKFZp564P1772 Protein kinase C-binding protein 1 yes no 0 0 0 6.5 0.5 1 1 36.599 36.667 3 0.0021231 7943 20230619_1887_Aki_TMTPro18x_K_F7 124.59 111.09 159950 121480 153980 150020 167290 170810 163610 164960 236230 162550 196080 188100 186740 165190 176020 190550 199220 190470 147790 111480 157060 149470 172650 171050 167410 168870 234660 165360 202570 189110 190460 172440 180540 191050 190330 180940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 89558000 8417 862 7966 15998;15999 12844;12845;12846 12845 3 9606 Homo sapiens -0.04209094765099053 FFGTEDHAWIK Unmodified 1349.6404 0.64043645 2827 K7EMM8;D3DUE6;Q49A26-5;Q49A26-2;Q49A26;D3DUE7;Q49A26-3;K7EQB2 GLYR1;N-PAC Putative oxidoreductase GLYR1 yes no 0 0 0 7.5 0.5 1 1 56.584 56.642 3 0.00064582 16426 20230619_1887_Aki_TMTPro18x_K_F7 94.297 58.883 61704 47913 56105 53499 47020 58807 51246 53092 67652 71045 64081 64517 68056 64886 57293 67550 62196 72549 56995 43926 57305 53665 49773 58935 51963 55104 67894 70655 66078 65777 68869 67049 58781 68095 59533 68817 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190840000 8418 2827 7967 16000;16001 12847 12847 1 9606 Homo sapiens -0.020398154365466326 FFIDQSK Unmodified 883.44397 0.44396847 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3;Q5CAQ4;I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 7.5 0.5 1 1 54.859 54.926 2;3 0.0053884 15679 20230619_1888_Aki_TMTPro18x_K_F8 100.45 52.602 72379 50783 60575 74443 52924 64668 65314 66784 78395 85176 85949 100180 112820 94257 70991 150540 127250 144780 66777 46709 62489 73070 56008 66150 65565 68603 79484 85548 89049 100910 112360 100390 76477 149780 121330 137510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39821000 8419 1211 7968 16002;16003 12848;12849 12849 2 9606 Homo sapiens -0.002415755396100394 FFLCQVAGDAK Unmodified 1254.6067 0.60669348 806;3082 P13591-1;A0A087WTF6;P13591;P13591-3;P13591-4;A0A087WV75;A0A087WWD4;A0A087WX77;A0A087WTE4;P13591-5;P13591-6;O00557;H7BYX6 NCAM1 Neural cell adhesion molecule 1 no no 0 0 0 1.67 0.471 1 2 61.088 61.095 2;3 0.00011483 19056 20230619_1881_Aki_TMTPro18x_K_F2 136.63 119.54 155760 134810 157790 243480 150430 179120 208370 208240 218560 185120 193720 192750 181170 167150 212180 215010 202330 214440 144090 124240 160580 235840 158440 186480 207020 210260 220930 188560 199470 194560 186870 175730 214700 215260 193760 203640 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 261160000 8420 806;3082 7969 16004;16005;16006 12850;12851;12852 12852 3 9606 Homo sapiens -0.010425601999486389 FFLEETLVR Unmodified 1152.6179 0.61791009 2354 B3KMQ6;Q9NZT2-2;Q9NZT2;Q05BV5;V9H0E3;Q6PK21;A0A0A0MRN5;V9H0H8 OGFR Opioid growth factor receptor yes no 0 0 0 6 0 1 62.555 62.606 2 0.079026 19300 20230619_1886_Aki_TMTPro18x_K_F6 71.501 55.807 34635 43916 34289 38800 37367 39995 37013 38492 42351 28035 31434 40254 39523 40749 48222 37615 34840 56158 32133 40123 34930 39654 38556 40358 37509 39162 42373 29297 33212 40317 40532 41843 48092 38919 33611 53064 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32586000 8421 2354 7970 16007 12853 12853 1 9606 Homo sapiens 0.04770585165874763 FFLGDLCSR Unmodified 1113.5277 0.52771487 1481 A0A7D5Q2L7;A0A384NPZ7;Q15738;C9JDR0 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes no 0 0 0 2 0 1 61.365 61.376 2 0.00013906 19214 20230619_1881_Aki_TMTPro18x_K_F2 173.73 147.28 197300 162290 174470 185780 147290 172070 181620 195510 201690 208600 198460 200240 215780 193220 214400 253300 225360 246110 182270 148780 178800 185590 156200 175590 181850 198450 204290 209820 204590 203520 219700 202680 218870 253050 215660 233760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198530000 8422 1481 7971 16008 12854 12854 1 9606 Homo sapiens -0.0245078743423619 FFLQGIQLNTILPDAR Unmodified 1845.0149 0.014868788 783 B3KRY3;A0A024RDY3;P11279;P11279-2 LAMP1 Lysosome-associated membrane glycoprotein 1 yes no 0 0 0 5 0 1 65.445 65.489 3 3.125E-08 20370 20230619_1885_Aki_TMTPro18x_K_F5 131.86 101.42 25634 18103 16913 23643 21332 23944 22656 19810 21324 21712 30233 40630 24059 25334 19743 28400 27001 29903 23616 16629 18013 23410 21863 24093 22723 20604 22139 22405 30393 39833 24580 26756 20603 28553 25784 28376 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 301860000 8423 783 7972 16009 12855 12855 1 9606 Homo sapiens 0.12616194865768193 FFLSHPAYR Unmodified 1136.5767 0.57671398 3619;2880 P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96;K7EMQ3;E5RHK8;H0YBC6;Q9UQ16-2;Q9UQ16-3;Q9UQ16;Q9UQ16-4;A0A8I5KXV5;B3KPF2;Q9UQ16-5;E5RIK2 DNM2;DNM3 Dynamin-2;Dynamin-3 no no 0 0 0 5.5 0.5 1 1 47.032 47.111 3 5.7089E-09 12630 20230619_1886_Aki_TMTPro18x_K_F6 199.8 184.21 132550 99371 113530 130060 95507 125050 130700 127250 151750 148210 128260 158530 150410 148620 134920 189070 171880 199980 122360 91257 116770 128740 101800 126830 130380 130450 152520 149000 133890 160080 152280 155700 139810 189780 164290 189730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148590000 8424 3619;2880 7973 16010;16011 12856;12857 12857 2 9606 Homo sapiens 0.013888689170244106 FFMGNQVLK Oxidation (M) 1098.5532 0.55320134 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 1 0 3.5 0.5 2 2 55.44 55.466 2;3 0.0020264 16531 20230619_1882_Aki_TMTPro18x_K_F3 104.37 57.299 308830 244550 277540 325360 351490 370380 352130 336210 375510 303430 343330 306990 331610 284140 336250 374420 327630 342640 285270 224570 285940 322400 359180 370320 355650 345030 379720 308690 353090 311070 339050 298570 341590 372920 313660 325720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 824890000 8425 3444 7974 16012;16013;16014;16015 12858;12859 12858 2078 2 9606 Homo sapiens 0.007866870882025978 FFMGNQVLK Unmodified 1082.5583 0.55828672 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 4.33 0.471 2 1 60.231 60.25 2;3 0.00049253 18404 20230619_1883_Aki_TMTPro18x_K_F4 112.94 81.569 313530 250430 296900 298660 253410 350940 321670 321330 364900 344630 304290 301800 347050 289830 351390 366090 345180 356540 289740 229710 302440 298390 269130 350060 321750 330890 366960 345830 317020 307980 353030 303470 356980 366090 330410 338710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 634900000 8426 3444 7974 16016;16017;16018 12860;12861 12860 2 9606 Homo sapiens 0.020309909508114288 FFNIPFLQLQR Unmodified 1421.782 0.78195573 3969 Q3YEC7;Q3YEC7-2;B3KXX7;F2Z2T0;Q3YEC7-3;Q9NWD6;G3V154;B3KSV0;Q8WYT4 RABL6;pp8875 Rab-like protein 6 yes no 0 0 0 8 0 1 65.569 65.589 2 0.00013968 20187 20230619_1888_Aki_TMTPro18x_K_F8 134.48 115.7 19744 17487 16754 20547 19430 18858 23537 20897 31618 9120.5 6780.7 6012.1 5439.5 5458.2 12913 6002.7 6850 4285.4 18243 16032 17332 20478 20079 19252 23710 20907 30688 9797.1 8077.3 6232.6 5962.9 5673.8 12626 5951.7 6594.9 4097.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24255000 8427 3969 7975 16019 12862 12862 1 9606 Homo sapiens 0.08793602656601252 FFNVLTTNTDGK Unmodified 1355.6721 0.67213051 1681 A0A7I2YQQ3;A8K335;Q92820;A0A7I2V5X9 GGH Gamma-glutamyl hydrolase yes no 0 0 0 1.5 0.5 1 1 61.669 61.674 3 0.012194 19374 20230619_1881_Aki_TMTPro18x_K_F2 54.524 32.479 142300 105360 139420 163680 119200 167000 165050 146980 185880 161220 152920 163140 197550 167450 154580 215750 189080 231230 131480 96957 141780 160430 126930 168000 164350 152020 186840 162340 160460 165760 198210 175190 160200 216690 180870 219310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292400000 8428 1681 7976 16020;16021 12863 12863 1 9606 Homo sapiens 0.008521325267338398 FFNYVPSGIR Unmodified 1198.6135 0.61349341 4317 Q969X6;Q969X6-2;Q969X6-3;H3BPD7 CIRH1A Cirhin yes no 0 0 0 5.5 0.5 1 1 60.406 60.461 2 0.0015749 18074 20230619_1885_Aki_TMTPro18x_K_F5 105.1 86.941 161940 143270 143070 161930 149670 197140 173930 166030 209620 67737 56337 55356 61126 52454 103930 73020 62467 57290 149670 131300 147170 162450 155940 195890 174930 169190 204970 73647 65334 56773 64317 55277 102470 72273 60133 54600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 96543000 8429 4317 7977 16022;16023 12864;12865 12864 2 9606 Homo sapiens 0.022131207429310962 FFPASADR Unmodified 909.43447 0.43446642 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;I3L0S0;Q96C96;B3KTQ9 P4HB Protein disulfide-isomerase yes no 0 0 0 7 0.816 1 1 1 47.672 47.747 2 0.0017391 12583 20230619_1888_Aki_TMTPro18x_K_F8 155.82 132.51 503980 407720 415340 446970 492070 556330 598200 582470 681900 390100 355070 324630 371580 310750 480160 383430 405060 343530 465310 373670 430760 449810 508240 554850 599120 587980 676030 403070 380540 332370 383950 324890 481640 382260 387860 326930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1009499999.9999999 8430 537 7978 16024;16025;16026 12866;12867 12866 2 9606 Homo sapiens -0.023873438251484913 FFPEDVSEELIQEITQR Unmodified 2079.0161 0.01605058 2184 P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;Q05CU6;Q6PKD3;P35241-3;E9PNV3;E9PQ82;A0A2R8Y5P0 RDX Radixin yes no 0 0 0 5 0 1 66.79 66.833 3 2.1021E-23 20881 20230619_1885_Aki_TMTPro18x_K_F5 194.77 161.47 4315.1 3823.3 5405.5 6053.8 4963 4652.6 5725.2 5491.2 5148.1 5962 6297.5 5141.7 5708.1 5795 5963.4 8389.8 6225.3 5611.5 4000.4 3516.8 5396.9 5909.7 5197.9 4830.4 5713.4 5567.3 5325.9 5973.6 6375.4 5290.2 5863 6085.1 6087.8 8227.1 5949.6 5361.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7948900 8431 2184 7979 16027 12868 12868 1 9606 Homo sapiens 0.019703196533555456 FFPHVLEK Unmodified 1015.5491 0.54910224 4422 Q9BRT9;E5RFF9 GINS4 DNA replication complex GINS protein SLD5;DNA replication complex GINS protein SLD5, N-terminally processed;DNA replication complex GINS protein SLD5 yes no 0 0 0 2 0 1 53.72 53.749 3 0.0028308 16088 20230619_1881_Aki_TMTPro18x_K_F2 100.02 74.079 294620 221120 253810 245960 226330 304880 256680 239470 282060 174290 196130 117830 189290 166780 212740 202760 210120 170100 271970 202740 260810 247190 238640 302220 257830 247470 282090 178270 204540 124320 194610 172320 215700 201400 200790 162060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96010000 8432 4422 7980 16028 12869 12869 1 9606 Homo sapiens 0.04194965656813565 FFPLESWQIGK Unmodified 1350.6972 0.69722304 3128 Q53Y51;J3KQ18;P30046;H7C342 DDT D-dopachrome decarboxylase yes no 0 0 0 3 0 1 64.311 64.343 2 1.9342E-08 20278 20230619_1882_Aki_TMTPro18x_K_F3 173.37 156.7 17749 13389 16009 17251 17494 18791 15865 17017 23185 17546 20784 20547 26365 21420 21942 20108 25187 28477 16391 12294 16433 17122 18025 18845 16322 17522 23096 17814 21676 20757 26516 22016 22557 20702 24090 26947 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18262000 8433 3128 7981 16029 12870 12870 1 9606 Homo sapiens 0.03590232119972825 FFPLIEVNK Unmodified 1105.6172 0.61718181 3514 P27694;I3L4R8 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes no 0 0 0 2.5 0.5 1 1 63.512 63.532 2 2.6205E-06 20197 20230619_1881_Aki_TMTPro18x_K_F2 188.98 152.78 104480 90297 96416 102700 96209 116060 106470 115770 124840 111440 115520 117110 131810 111110 118830 123860 122640 130930 96582 82764 98660 102900 100340 116330 107360 118140 125750 113060 119690 118440 133380 115500 121300 124650 117360 124250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150250000 8434 3514 7982 16030;16031 12871 12871 1 9606 Homo sapiens 0.06859790516796238 FFPLVPDLLSPR Unmodified 1399.7864 0.7863724 4748 Q9Y5N5-2;Q9Y5N5 N6AMT1 HemK methyltransferase family member 2 yes no 0 0 0 5 0 1 66.02 66.063 3 0.0017094 20582 20230619_1885_Aki_TMTPro18x_K_F5 89.403 75.634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8435 4748 7983 16032 12872 12872 1 9606 Homo sapiens 0.1024706707949008 FFQGMPEKPTTTVR Oxidation (M) 1653.8185 0.81847717 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;A0A2R8Y7S8;V9H068;B4DN49;V9H023;V9H0D5;V9H0B2;V9H015;V9H062 MSH2 DNA mismatch repair protein Msh2 yes no 0 1 1 3 0 1 46.901 46.98 3 0.09154 12756 20230619_1882_Aki_TMTPro18x_K_F3 43.69 32.636 151230 131360 146020 156820 165210 149690 148740 142040 152340 179690 186410 164260 184360 155070 176050 197550 181870 167700 139850 120460 149060 156200 169380 151860 151110 146690 156520 179080 189430 167250 187790 162490 179610 196120 173850 159650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107090000 8436 3585 7984 16033 12873 12873 2254 1 9606 Homo sapiens 0.017720667003004564 FFQPTEMASQDFFQR Unmodified 1877.8407 0.84066917 1042 O94973-2;O94973;B7Z5S9;A0A0G2JS82;B7Z1Q4 AP2A2 AP-2 complex subunit alpha-2 yes no 0 0 0 4.5 3.5 1 1 63.014 63.027 3 0.00034705 19725 20230619_1880_Aki_TMTPro18x_K_F1 89.471 16.573 44285 48626 53047 56336 42029 54107 57204 62529 54895 72957 65782 63802 69086 66362 65697 71255 76863 77434 41104 44543 53027 56254 44950 55067 56769 63554 56574 72853 67125 65268 70301 68620 67510 71860 73438 73479 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204380000 8437 1042 7985 16034;16035 12874;12875 12874 2 9606 Homo sapiens -0.06313753621907381 FFQPTEMASQDFFQR Oxidation (M) 1893.8356 0.83558379 1042 O94973-2;O94973;B7Z5S9;A0A0G2JS82;B7Z1Q4 AP2A2 AP-2 complex subunit alpha-2 yes no 0 1 0 7 0 1 61.65 61.689 3 0.0094764 18543 20230619_1887_Aki_TMTPro18x_K_F7 62.711 52.546 83390 73786 78260 89696 100280 77117 95028 94560 108790 95123 85865 111660 115390 101780 119550 124090 112280 121250 77108 67668 80285 89133 102030 79440 96525 95442 109180 96616 90696 112230 117060 106460 121120 124180 107560 115160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163460000 8438 1042 7985 16036 12876 12876 606 1 9606 Homo sapiens -0.07558057484538949 FFQTACDVPELQDK Unmodified 1696.7767 0.77667193 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 5.5 0.5 1 1 61.038 61.091 3 5.5702E-05 18377 20230619_1885_Aki_TMTPro18x_K_F5 97.273 54.315 57067 43388 59397 68003 46709 72263 58726 67919 76278 50634 64734 78170 67381 61674 60188 74380 81189 71107 52763 39926 60028 66664 50030 72554 59095 69231 76138 52974 67161 77555 68406 64779 62563 74322 77409 67609 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228700000 8439 707 7986 16037;16038 12877 12877 1 9606 Homo sapiens -0.04384533778829791 FFSGYGR Unmodified 832.38679 0.38678794 1567 A0A590UJK4;A0A590UK01;A0A590UJP7;Q59GY3;A8K588;A0A590UK80;Q13247-3;Q13247;V9HVZ0;B5BU15;Q13247-2 SRSF6;HEL-S-91;SFRS6 Serine/arginine-rich splicing factor 6 yes no 0 0 0 4 0.816 1 1 1 49.374 49.437 2 0.025746 13720 20230619_1883_Aki_TMTPro18x_K_F4 97.473 87.335 605590 526530 563020 625380 655140 679700 681090 654490 795390 715800 700840 708640 739160 632080 736290 794580 765770 727710 559870 482790 577210 624190 673770 682820 688610 672090 800080 720110 725390 717230 753140 663020 750690 792020 732130 692030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1030799999.9999999 8440 1567 7987 16039;16040;16041 12878 12878 1 9606 Homo sapiens -0.03610998025328627 FFSRPSGR Unmodified 952.4879 0.48789897 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9;A0A087X1U8;H7C1M8 RRP12 RRP12-like protein yes no 0 0 1 7.5 0.5 1 1 37.39 37.415 3 0.010362 8231 20230619_1887_Aki_TMTPro18x_K_F7 79.596 68.106 124830 114920 119830 119830 131780 123700 148860 145100 148930 129120 128800 110250 143040 102900 124590 159070 131240 104530 115470 105230 122310 120770 136190 125390 149080 146320 150890 130770 133610 112710 144540 109370 127570 155800 125320 99955 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85039000 8441 2355 7988 16042;16043 12879;12880 12879 2 9606 Homo sapiens 0.009754536773925793 FFSWTLEPIFSSSEPTSEAR Unmodified 2317.0903 0.090278155 787 X6R5E5;A8K2S7;A0A024RE02;Q8NBM4;B7Z6T7;Q8NBM4-4;Q8NBM4-3;Q8NBM4-2 UBAC2;PHGDHL1 Ubiquitin-associated domain-containing protein 2 yes no 0 0 0 8 0 1 65.783 65.802 3 9.0848E-05 20280 20230619_1888_Aki_TMTPro18x_K_F8 77.554 67.805 6101.4 6142.9 5589 6008.6 6225.5 7579.3 8162.8 6945.9 6186.8 8316 11348 12052 9624.1 9217 8985.8 10334 8533.6 12839 5646 5620.2 5735.2 6103.1 6467.9 7532.3 8057 7180.4 6620.4 8438.3 11330 11968 9849 9656.1 9133.4 10503 8199 12152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6110300 8442 787 7989 16044 12881 12881 1 9606 Homo sapiens -0.015583372551191133 FFTDDLFQYAGEK Unmodified 1579.7195 0.71947463 1060 B2WTI3;B2WTI4;K7EJU9;A0A0S2PZM4;Q6NYC1-2;Q6NYC1;Q6NYC1-3 JMJD6 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 yes no 0 0 0 6.5 0.5 1 1 64.146 64.184 3 2.7498E-05 19727 20230619_1887_Aki_TMTPro18x_K_F7 116.81 89.471 84042 61004 65500 85747 57894 61039 75754 80745 70230 106900 90310 82806 103810 95542 70742 158470 126280 121220 77514 56075 68082 84216 61211 64050 75221 81827 72847 105820 92221 85745 104070 101400 76072 155870 120250 115550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251440000 8443 1060 7990 16045;16046 12882 12882 1 9606 Homo sapiens -0.0471963299289655 FFTGQITAAGK Unmodified 1139.5975 0.597509 87 Q2TB59;A0A024R0C3;Q13423;A0A590UJM2;A0A590UK29;E9PCX7;A0A590UJI3 NNT NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 56.551 56.572 3 4.3844E-05 16879 20230619_1883_Aki_TMTPro18x_K_F4 111.86 87.002 113710 104940 132250 126160 121840 121010 140020 146240 159910 147010 156130 158440 165830 140190 144380 165990 161500 164180 105370 96210 132590 125680 127720 123380 140790 147660 161600 148860 160790 159740 167930 146570 148250 166240 154380 155950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 170650000 8444 87 7991 16047;16048 12883;12884 12884 2 9606 Homo sapiens 0.0332941450603812 FFTNFESR Unmodified 1046.4821 0.48214489 3146 J3QQZ9;V9HW45;Q53FP0;Q9NVS9-3;Q9NVS9;Q9NVS9-4;J3QQV6;A0A286YFL3 PNPO;HEL-S-302 Pyridoxine-5'-phosphate oxidase yes no 0 0 0 4.5 3.5 1 1 56.119 56.15 2 0.00071215 16913 20230619_1880_Aki_TMTPro18x_K_F1 157.8 129.62 324490 266310 300870 328150 287210 347820 374670 377580 418400 345540 371290 374460 378160 315570 414900 417230 388540 399280 299870 244330 307640 326630 302050 350810 374020 382820 421590 351860 383630 377020 387440 332820 419820 416640 372080 379390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 214760000 8445 3146 7992 16049;16050 12885;12886 12885 2 9606 Homo sapiens -0.03923689624934923 FFTTPSK Unmodified 826.4225 0.42250475 3325 O76021;O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 0 3.2 0.748 1 2 2 52.128 52.171 2;3 0.0070992 15093 20230619_1882_Aki_TMTPro18x_K_F3 127.84 85.369 573790 487660 541130 591550 588420 660200 670670 594520 594460 650630 616050 576940 774150 570940 580390 797580 752530 658760 530450 447280 553510 589730 609470 660910 669000 613610 611380 652280 637660 589360 775440 601400 604240 789430 717700 627510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 595930000 8446 3325 7993 16051;16052;16053;16054;16055 12887;12888 12887 2 9606 Homo sapiens 0.002350394316749771 FFVADTANEALEAAK Unmodified 1595.7831 0.78313752 4365 Q96I99;E9PDQ8;Q96I99-2 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes no 0 0 0 5 0.816 1 1 1 62.311 62.345 3 2.0013E-05 18974 20230619_1885_Aki_TMTPro18x_K_F5 105.14 89.6 123460 92811 124560 129950 131640 151370 136760 136500 162880 143960 130420 121960 153060 132510 158360 150470 160190 162060 114110 85295 126590 128420 136390 151050 138410 140660 163190 144510 136320 125220 155780 137330 160990 151600 153260 153800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 640360000 8447 4365 7994 16056;16057;16058 12889;12890 12889 2 9606 Homo sapiens 0.009077274441779082 FFVGGNWK Unmodified 953.47594 0.4759373 3674 V9HWK1;P60174;P60174-3;B4DUI5;Q53HE2;Q2QD09 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 4.5 0.5 1 1 60.695 60.722 2 0.0011412 18157 20230619_1885_Aki_TMTPro18x_K_F5 148.07 90.971 1323600 1285500 1291700 1109800 1176100 1999000 1391500 1337100 2126400 1121000 939020 822940 1022400 815090 1392300 1037500 1048800 915150 1225100 1175200 1312900 1147800 1243700 1937700 1412300 1405200 2074300 1138500 1022900 849260 1058400 853230 1388200 1033400 1005900 871000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2708500000 8448 3674 7995 16059;16060 12891;12892 12892 2 9606 Homo sapiens -0.002661630658167269 FFVNFPSAK Unmodified 1055.544 0.54401687 1285 A0A1K0FUB6;Q8WWM9;K7EMC7 CYGB Cytoglobin yes no 0 0 0 4.33 0.471 2 1 61.979 62.005 2;3 8.7468E-05 18789 20230619_1885_Aki_TMTPro18x_K_F5 181.69 128.97 614780 603050 575760 512850 352640 360970 594470 613900 582520 868890 249290 370610 870730 476190 334450 1349100 193110 486000 568880 551210 584380 524490 390100 383090 585100 616080 583760 848590 299070 403280 841630 534140 347580 1290100 188160 469680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 772170000 8449 1285 7996 16061;16062;16063 12893;12894 12894 2 9606 Homo sapiens 0.018466617941840013 FFVSSSQGR Unmodified 1013.493 0.49304393 1707 B4DY23;A0A7P0TA85;Q54A51;B4DNE1;P35613-2;P35613;A0A087WUV8;P35613-3;P35613-4;A0A7P0TB04;A0A7P0T8A7;I3L192;R4GMX5 hEMMPRIN;BSG Basigin yes no 0 0 0 3.5 0.5 1 1 46.375 46.418 2 1.2544E-11 12477 20230619_1882_Aki_TMTPro18x_K_F3 180.93 162.15 534520 457940 520830 609580 588370 650040 633380 612360 688340 416550 443010 353700 391370 340700 499940 493970 463640 445180 494300 420410 531810 603470 607010 653240 637490 623120 687430 430080 463520 362260 406410 359950 504430 491200 443830 423420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 299760000 8450 1707 7997 16064;16065 12895;12896 12895 2 9606 Homo sapiens -0.013162872506541134 FFYAGTPPAGLAADSHVK Unmodified 1847.9206 0.92063405 3338 O94919 ENDOD1 Endonuclease domain-containing 1 protein yes yes 0 0 0 2 0 1 56.082 56.101 4 0.00028562 17054 20230619_1881_Aki_TMTPro18x_K_F2 79.805 60.972 23404 17332 16663 17769 21851 21358 22813 25553 26629 21421 23288 20036 22178 17698 19792 28603 19627 21380 21577 15881 17570 17972 22312 21434 23063 25687 26763 21829 23978 20361 22549 18904 20210 28136 18793 20377 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5105000 8451 3338 7998 16066 12897 12897 1 9606 Homo sapiens 0.030590560436166925 FFYSDQNVDSR Unmodified 1376.5997 0.59969384 1292;4740 A0A1S5UZ07;Q9Y490;Q9Y4G6 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 0 4.5 0.5 1 1 51.108 51.14 2 0.00011491 14265 20230619_1885_Aki_TMTPro18x_K_F5 125.23 116.69 76093 59139 65292 76688 63348 79090 78593 71804 91585 90889 100510 100160 108850 92101 92666 99178 103100 111210 70257 54297 67280 76012 66475 79602 78753 74407 92915 91136 103060 100990 110050 95665 95126 100210 98597 105470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40649000 8452 1292;4740 7999 16067;16068 12898;12899 12899 2 9606 Homo sapiens -0.07354201546809236 FGAAVLGNHTAR Unmodified 1212.6364 0.63635412 4059 Q5T1M5;A0A8I5QJ94;Q5T1M5-2;A0A8I5QJL3;A0A8I5KX71;B4DZS8;A0A8I5KRH4;A0A8I5KV70;A0A8I5KRZ8;A0A8I5KQM8;Q5T1M5-3;A0A8I5KXA6 FKBP15 FK506-binding protein 15;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 3.5 0.5 1 1 41.662 41.715 3 0.024818 10301 20230619_1883_Aki_TMTPro18x_K_F4 56.174 24.539 52967 39268 42469 49491 61543 65126 54921 57274 79512 47742 64259 64159 60368 56712 57861 53052 68466 67886 48868 36049 44340 49330 62291 64488 56496 58793 78878 49335 66469 64146 61669 58539 59437 54225 65402 64323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56166000 8453 4059 8000 16069;16070 12900 12900 1 9606 Homo sapiens 0.03854139860413852 FGAPPHAGGGIGLER Unmodified 1434.7368 0.73679645 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 43.998 44.049 3 9.3766E-26 11091 20230619_1888_Aki_TMTPro18x_K_F8 237.65 195.57 174270 135630 163070 152830 166090 205970 189430 189880 199650 210460 206840 201530 225450 200610 230000 251540 239840 230000 161010 124350 166610 153700 173100 203840 190000 195560 203210 211330 212730 205070 229800 209600 234460 250710 229310 218720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 849930000 8454 1207 8001 16071;16072 12901;12902 12902 2 9606 Homo sapiens 0.03681752123407023 FGAQNEEMLPSILVLLK Unmodified 1901.0332 0.033220969 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 2 0 1 66.709 66.715 3 2.9806E-05 21507 20230619_1881_Aki_TMTPro18x_K_F2 95.428 75.322 4954.7 4797.6 4456.9 5748.3 6348 6628 6600.3 5379.2 5695.1 7064.4 5693.7 5099.4 6298.8 5080.1 7175.1 6013.3 6723.1 5484.4 4583 4397.9 4605.7 5735.9 6445.2 6609 6607.9 5629.4 5864.1 6988.7 5868.8 5264.1 6448.7 5293.1 7248.6 6002.7 6428.4 5219.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6407500 8455 4753 8002 16073 12903 12903 1 9606 Homo sapiens 0.11874568725443169 FGAQQDTIEVPEK Unmodified 1460.7147 0.7147236 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5;Q9BWF4 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 3.5 1.12 1 1 1 1 53.227 53.271 3 4.3849E-06 15468 20230619_1883_Aki_TMTPro18x_K_F4 128.54 87.45 771230 587920 679460 686260 672790 855220 802860 755960 787180 821470 810000 727070 837870 653810 734550 846600 792190 748520 712130 539260 697980 687310 703760 849480 801510 780860 804040 823810 830660 740290 848930 687270 752550 841890 757100 712150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1026699999.9999999 8456 2702 8003 16074;16075;16076;16077 12904;12905 12905 2 9606 Homo sapiens 0.0027948286433456815 FGAVEGAVAK Unmodified 947.50763 0.50763136 1674 A0A7I2V5T7;B3KPZ2;Q9H7Z7;A6NHH0;A0A7I2V5X6;X6RJ95 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes no 0 0 0 7 0 1 50.823 50.9 2 0.0031047 13985 20230619_1887_Aki_TMTPro18x_K_F7 109.71 70.923 79795 66336 77941 86151 88940 100050 104310 91251 108470 101410 114750 115760 119380 91765 102070 132240 130490 113520 73777 60890 79565 85537 91922 99905 104370 94144 110480 102390 117640 116110 120830 97589 105830 131100 124460 108080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172970000 8457 1674 8004 16078 12906 12906 1 9606 Homo sapiens 0.03177784897479796 FGCRDPVR Unmodified 1005.4814 0.48143338 3432;1055 B4DRW6;B2RB32;A0A0M4FEM1;P11217;P11217-2;Q59GM9;P11216;B4DSD8 PYGM;PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, muscle form;Glycogen phosphorylase, brain form no no 0 0 1 5.33 3.09 1 1 1 33.299 33.326 3 0.0039218 6834 20230619_1888_Aki_TMTPro18x_K_F8 98.629 63.524 338750 280990 328000 310510 402220 402810 385910 384700 429900 114920 163180 127910 110530 109070 217070 111010 311100 99408 313180 257520 335060 312530 411190 400010 391230 387040 423710 131540 177680 129000 119960 113120 223350 111250 295290 95317 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 126810000 8458 1055;3432 8005 16079;16080;16081 12907;12908 12908 2 9606 Homo sapiens -0.02108807545653235 FGDFVLK Unmodified 824.44324 0.44324019 2076 A8K5J1;P11172;B5LY71;B5LY69;E9PFD2;B5LY67;F2Z3P2;F2Z303;F8WDG4 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes no 0 0 0 1 0 1 61.38 61.38 2 0.035158 19026 20230619_1880_Aki_TMTPro18x_K_F1 92.925 46.359 398030 328790 358940 382990 383590 453930 396950 387440 447260 515180 497550 507660 540660 477710 468680 598400 221980 576760 367770 301480 368410 383270 397230 452120 401110 403810 455270 513570 510040 514740 546690 500060 465150 597800 217230 546740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175170000 8459 2076 8006 16082 12909 12909 1 9606 Homo sapiens 0.02399629811327486 FGDLILK Unmodified 804.47454 0.47454032 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q6JH03 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 1.5 0.5 1 1 61.576 61.581 2 0.020041 19104 20230619_1880_Aki_TMTPro18x_K_F1 105.12 32.883 400060 316750 354620 441850 394960 463820 449540 462660 473970 467900 452360 503800 507380 462240 473820 514240 502510 536100 369500 291030 365230 436020 408810 467130 450860 472900 480790 473660 467980 508270 514730 480810 484220 517080 480750 508840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253930000 8460 1863 8007 16083;16084 12910 12910 1 9606 Homo sapiens 0.0644820284543357 FGDPECQVILPLLK Unmodified 1627.8644 0.86436473 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 5.33 3.09 1 1 1 64.363 64.38 3 8.1596E-05 19686 20230619_1888_Aki_TMTPro18x_K_F8 96.591 79.085 125060 107300 121090 141790 127970 181490 134530 124100 139410 133560 146290 145010 186080 126450 126000 193980 174590 187740 115640 98495 123610 140770 132870 179070 135430 131060 142060 134890 151450 146220 185630 134750 132250 193260 166670 178340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 743610000 8461 3488 8008 16085;16086;16087 12911;12912 12912 2 9606 Homo sapiens 0.07554711882585252 FGDPVVQSDMK Oxidation (M) 1237.5649 0.56488824 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DNX1 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 1 0 4.5 0.5 1 1 48.531 48.588 2 0.0048834 13322 20230619_1883_Aki_TMTPro18x_K_F4 82.954 56.511 52625 43344 46137 65417 60554 67740 70162 67968 91995 65494 74225 78677 85555 71005 53137 111270 102410 92364 48613 39855 47756 64225 62067 68296 70807 69377 91684 66783 77466 79113 85479 75589 57643 109920 97441 87965 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69845000 8462 1031 8009 16088;16089 12913 12913 599 1 9606 Homo sapiens -0.04439160679135057 FGDPVVQSDMK Unmodified 1221.57 0.56997362 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DNX1 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 4.5 0.5 1 1 52.504 52.552 3 0.0010169 14864 20230619_1885_Aki_TMTPro18x_K_F5 90.685 67.449 90702 82608 91290 134470 101000 131300 117360 130130 194980 138290 142540 142680 171840 135320 122170 185630 182060 162800 83934 76004 93132 131350 104880 132860 119730 133240 191980 139610 149910 144510 172110 142500 128750 184260 173480 154940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 329330000 8463 1031 8009 16090;16091 12914 12914 1 9606 Homo sapiens -0.031948568165034885 FGDQDVWILPQAEWQPGETLR Unmodified 2484.2074 0.2073736 4505 Q9H2W6;A0A087WT51;Q8TER9 MRPL46;FLJ00124 39S ribosomal protein L46, mitochondrial yes no 0 0 0 5.5 0.5 1 1 64.6 64.645 3 8.7328E-05 20226 20230619_1886_Aki_TMTPro18x_K_F6 73.675 63.887 12271 10547 11436 12342 10273 12402 11911 11851 12504 11648 12738 12300 16686 12360 11933 14720 15217 19288 11343 9669.7 11675 12319 10817 12523 11938 12144 12715 11806 13224 12468 16668 12890 12416 14998 14556 18256 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175710000 8464 4505 8010 16092;16093 12915 12915 1 9606 Homo sapiens 0.024638206844883825 FGDQGGFK Unmodified 854.39227 0.39226725 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 7 0 1 48.194 48.281 2 0.0059672 12810 20230619_1887_Aki_TMTPro18x_K_F7 111.95 64.099 147910 110720 121810 144960 145950 168940 141150 144910 183190 163620 188230 160770 166430 149740 150340 175570 203300 182420 136490 101680 126410 143830 149770 168430 143910 150190 184360 164350 191700 163090 169900 156180 156210 176330 193860 173270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90261000 8465 68 8011 16094 12916 12916 1 9606 Homo sapiens -0.04075319233504615 FGDRFPAMSDAYDR Oxidation (M) 1662.7097 0.709655 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;A0A8V8TL37 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 1 1 4.5 0.5 1 1 44.869 44.93 3 0.0013316 11570 20230619_1885_Aki_TMTPro18x_K_F5 84.75 73.136 159380 138510 151960 161010 177470 160890 162500 160210 161370 191300 222940 235230 227090 191450 201260 207660 237500 241910 147380 126980 155360 160800 181630 162830 164780 164600 167050 192910 226100 235250 230390 199820 207140 210330 226920 229390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 263830000 8466 3373 8012 16095;16096 12917 12917 1970 1 9606 Homo sapiens -0.09519144269938806 FGDRFPAMSDAYDR Unmodified 1646.7147 0.71474038 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;A0A8V8TL37 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 0 1 6 0.816 1 1 1 50.837 50.914 3 9.4072E-12 14294 20230619_1886_Aki_TMTPro18x_K_F6 182.35 160.79 402980 364430 406550 387640 335690 391620 389370 390150 405770 480660 434000 438600 505670 419950 441930 544270 486840 478440 372900 333770 411500 389900 355840 395820 390250 401100 414100 479510 447150 446610 510740 440380 453550 540980 465310 455150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 589940000 8467 3373 8012 16097;16098;16099 12918;12919;12920 12919 3 9606 Homo sapiens -0.08274840407307238 FGDYQCNSAMGISQMLK 2 Oxidation (M) 1980.838 0.83796833 3650 P54136;P54136-2 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 2 0 8 0 1 54.041 54.112 3 0.018011 15355 20230619_1888_Aki_TMTPro18x_K_F8 48.053 37.857 32380 26491 32212 35761 29348 33675 33938 33503 30936 35606 31455 30671 35522 28891 31787 41357 36362 38972 29940 24328 32715 35318 30830 34200 33875 34303 31745 35709 32427 31319 35944 30530 32696 41193 34765 37032 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15067000 8468 3650 8013 16100 12921 12921 2343;2344 1 9606 Homo sapiens -0.113217131333613 FGEAIGMGFPVK Oxidation (M) 1267.6271 0.62709457 2144 X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9;B4DM07 GTF2I General transcription factor II-I yes no 0 1 0 1.5 0.5 1 1 59.829 59.835 3 0.0062146 18416 20230619_1880_Aki_TMTPro18x_K_F1 68.536 53.563 61432 53329 62972 63282 58486 77615 73515 69091 71223 64831 60781 56202 58585 51351 69641 69542 65286 72268 56838 48899 63800 63287 61582 77169 73177 71060 72262 65500 62766 57321 60402 54104 70384 69739 62556 68586 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122050000 8469 2144 8014 16101;16102 12922;12923 12922 1341 2 9606 Homo sapiens 0.003986104598652673 FGEAIGMGFPVK Unmodified 1251.6322 0.63217995 2144 X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9;B4DM07 GTF2I General transcription factor II-I yes no 0 0 0 2 0 1 62.499 62.508 3 0.0043412 19732 20230619_1881_Aki_TMTPro18x_K_F2 79.82 57.947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8470 2144 8014 16103 12924 12924 1 9606 Homo sapiens 0.016429143224740983 FGEALKK Unmodified 791.45414 0.45413923 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;Q9BXJ9-4 NAA15;NARG1 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 1 2 0 1 45.796 45.878 3 0.075472 12525 20230619_1881_Aki_TMTPro18x_K_F2 53.351 22.694 382690 297530 372610 387600 413820 424780 425310 400100 495750 460240 488860 438890 476660 352900 455930 402230 467800 335330 353670 273180 380020 384490 426720 426220 430320 412110 500730 461330 501030 443600 485480 369620 464280 399950 446550 319690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206280000 8471 2297 8015 16104 12925 12925 1 9606 Homo sapiens 0.050070321856082955 FGEDVVEVIK Unmodified 1133.5968 0.5968403 4383 Q96N67;Q96N67-6;Q96N67-2;Q96N67-5;Q96N67-3;Q96N67-4;A0A2X0SSK2;B3KRG0;A0A1B0GWE0;B4DSH0;A4FU72 DOCK7 Dedicator of cytokinesis protein 7 yes no 0 0 0 4 0 1 61.225 61.229 3 0.026735 18839 20230619_1883_Aki_TMTPro18x_K_F4 49.5 22.171 45136 38704 44255 52600 45942 53809 47166 51925 58685 51926 54079 60714 60887 55036 53177 64204 65196 70962 41742 35540 45106 51974 47664 54259 47860 53179 58945 52759 56042 61042 61597 57434 54935 64716 62303 67307 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14276000 8472 4383 8016 16105 12926 12926 1 9606 Homo sapiens 0.035385750663408544 FGELVMTK Unmodified 923.47864 0.47863942 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5;A0A2R8YG21 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 4.5 3.5 1 1 58.109 58.132 2;3 0.002215 17721 20230619_1880_Aki_TMTPro18x_K_F1 130.27 71.29 188580 163920 180290 189120 198560 252980 252710 248410 284470 244920 246900 258160 270220 237680 258610 305000 290540 299790 174370 150260 184270 189800 206540 250780 252540 253920 286400 248190 256230 260890 274610 249360 265200 304980 277740 284760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259440000 8473 2908 8017 16106;16107 12927;12928 12927 2 9606 Homo sapiens 0.01383924276842663 FGELVMTK Oxidation (M) 939.47355 0.47355404 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5;A0A2R8YG21 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 1 0 8 0 1 53.308 53.383 2 0.047974 15008 20230619_1888_Aki_TMTPro18x_K_F8 69.198 27.545 224900 199210 198920 246760 289330 289060 300460 294020 322080 282940 305340 285010 306140 273760 299050 361760 326100 349740 207870 182720 205900 245800 293460 289270 302830 299700 326140 286680 314020 289160 312230 287350 306080 361240 311920 332230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 319860000 8474 2908 8017 16108 12929 12929 1729 1 9606 Homo sapiens 0.001396204142224633 FGEPVLAGFAR Unmodified 1162.6135 0.61349341 2124 A8K9T9;A8K8N7;O15067 PFAS Phosphoribosylformylglycinamidine synthase yes no 0 0 0 2 0 1 60.091 60.103 2 0.0060079 18666 20230619_1881_Aki_TMTPro18x_K_F2 103.19 81.045 70737 60260 69545 66317 60076 70441 72952 72059 72132 77979 71189 68115 79537 69245 74724 81329 80409 74234 65417 55219 70589 66573 63513 70966 72812 73657 73548 78181 73446 69653 80698 72025 76416 81126 76837 70606 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56940000 8475 2124 8018 16109 12930 12930 1 9606 Homo sapiens 0.03869120742933774 FGESTTGFNFSFK Unmodified 1467.667 0.66704513 3613 P49792;A0A8V8TLN4;A0A8V8TMN6 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 3 0 1 62.455 62.485 3 0.00080693 19460 20230619_1882_Aki_TMTPro18x_K_F3 63.766 10.976 138790 104410 115540 135670 107690 135300 118890 125770 144800 163420 158870 146240 165610 139210 135210 188950 167910 177590 128090 95876 119310 134400 113010 136580 120090 130150 146730 162600 162510 149090 167370 146480 140130 188270 160400 168760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97850000 8476 3613 8019 16110 12931 12931 1 9606 Homo sapiens -0.04808171335866973 FGEVVDCTLK Unmodified 1166.5642 0.56415996 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;D6RAF8;D6RF44;D6RD83;D6RBQ9 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 5.46 1.08 3 4 3 3 56.296 56.347 2;3 6.9585E-06 16825 20230619_1886_Aki_TMTPro18x_K_F6 131.52 0 2603300 2132800 2327000 2555300 2312200 2650700 2685700 2671900 2749200 3181600 2901200 2810300 3534600 2818300 2537200 3855200 2633800 3261300 2405100 1956200 2388200 2547500 2413900 2673800 2688800 2741600 2806600 3176200 2995800 2871900 3538300 2962200 2610600 3820200 2523400 3101600 11 11 11 11 11 11 11 11 11 11 11 11 11 11 11 11 11 11 16533000000 8477 759 8020 16111;16112;16113;16114;16115;16116;16117;16118;16119;16120;16121;16122;16123 12932;12933;12934;12935;12936;12937;12938;12939;12940 12937 9 9606 Homo sapiens -0.01245955328204218 FGFAESIANQR Unmodified 1238.6044 0.60438529 1956 B4DXG8;A5PLM5;Q06265;Q06265-2;D6RIY6;Q06265-3;Q06265-4 EXOSC9 Exosome complex component RRP45 yes no 0 0 0 1 0 1 54.494 54.494 2 5.384E-17 16205 20230619_1880_Aki_TMTPro18x_K_F1 190.02 156.75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8478 1956 8021 16124 12941 12941 1 9606 Homo sapiens -0.005372726134055483 FGFAIGSQTTK Unmodified 1155.5924 0.59242362 4283 Q8WW12;Q8WW12-2 PCNP PEST proteolytic signal-containing nuclear protein yes no 0 0 0 3.67 0.471 1 2 56.206 56.228 3 0.00031375 16899 20230619_1882_Aki_TMTPro18x_K_F3 101.48 76.045 64194 50541 63273 64952 57362 62103 65664 63298 77934 71306 66660 66191 78700 62081 65161 85832 68874 76860 59337 46396 64269 64380 60278 63048 66113 64814 78263 71498 69440 67323 79269 65446 66823 85305 65918 73068 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 293760000 8479 4283 8022 16125;16126;16127 12942;12943 12942 2 9606 Homo sapiens 0.020851106434292888 FGFEIIETKK Unmodified 1210.6598 0.6597749 2895 E7EQ69;Q9GZZ1;C9J5D1;Q9GZZ1-2;B0AZT5 NAA50 N-alpha-acetyltransferase 50 yes no 0 0 1 2 0 1 58.579 58.593 3 0.00051518 18054 20230619_1881_Aki_TMTPro18x_K_F2 105.13 72.524 96262 89963 101840 83456 77190 72702 84325 85297 83477 121320 101670 82497 118200 80383 93519 130120 110410 97045 89132 82295 102470 84818 82188 74745 84687 87211 86036 119410 104040 85529 118800 85700 96662 128000 105380 92574 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69777000 8480 2895 8023 16128 12944 12944 1 9606 Homo sapiens 0.06287140854374229 FGFGFGGTGK Unmodified 973.46577 0.46576654 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 3.5 0.5 1 1 58.731 58.747 2 2.0405E-05 17795 20230619_1883_Aki_TMTPro18x_K_F4 160.26 84.526 331100 267430 295450 340910 281350 360530 345990 347850 390030 392080 387490 397830 418470 368260 363760 453940 421530 470980 305860 245450 303240 338440 295600 362650 346510 357450 394840 394070 399090 402670 423650 385370 374560 455470 403100 446970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 513110000 8481 1661 8024 16129;16130 12945 12945 1 9606 Homo sapiens -0.02202770791052444 FGFGFGGTGKK Unmodified 1101.5607 0.56072956 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 1 6 0 1 52.816 52.893 3 0.0025623 15148 20230619_1886_Aki_TMTPro18x_K_F6 79.07 58.2 204180 219900 198270 192190 227360 191830 220370 222290 180110 225320 210120 161150 216450 163160 234520 200900 178940 148430 189120 200980 202220 196650 233070 195070 221460 225010 187270 225450 214230 166730 221320 170310 234900 198500 171530 141640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36693000 8482 1661 8025 16131 12946 12946 1 9606 Homo sapiens 0.0140116268012207 FGFPAFSGISR Unmodified 1184.5978 0.59784335 1174 P53004;A0A140VJF4 BLVRA Biliverdin reductase A yes no 0 0 0 6 0 1 62.144 62.195 2 7.0482E-05 19080 20230619_1886_Aki_TMTPro18x_K_F6 173.75 152.8 506700 481070 487430 617290 613870 730360 559440 566470 689490 405480 375140 326080 352070 315620 520080 496940 436680 376170 468860 441320 499480 613280 626840 725970 571050 585820 681830 416730 398740 334920 368300 335310 521160 489790 418200 358790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334580000 8483 1174 8026 16132 12947 12947 1 9606 Homo sapiens 0.012928342258874181 FGFPEGSVELYAEK Unmodified 1571.7508 0.75077476 3494 P23396;E9PPU1;H0YCJ7;A7E2S3;F2Z2S8;H0YF32 RPS3 40S ribosomal protein S3 yes no 0 0 0 5 0.816 1 1 1 62.329 62.363 3 2.1222E-07 18964 20230619_1885_Aki_TMTPro18x_K_F5 141.58 122.26 1402300 1374700 1520300 1537700 1466500 1712300 1775800 1671400 1553600 1645500 1580600 1441800 1629900 1255900 1833800 1394000 1293000 1408300 1299100 1259300 1534200 1542400 1535300 1717500 1765900 1709800 1597200 1657700 1622700 1466600 1669900 1309900 1828900 1401100 1243200 1337100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1992899999.9999998 8484 3494 8027 16133;16134;16135 12948;12949 12948 2 9606 Homo sapiens -0.01223059958806516 FGFVDAQK Unmodified 910.45487 0.45486751 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 7.5 0.5 1 1 53.916 53.985 2 0.0024576 15270 20230619_1888_Aki_TMTPro18x_K_F8 136.16 89.785 184240 129610 142240 191690 158570 219800 191010 202110 265840 202650 212560 286340 255660 245120 175770 313340 315520 344830 169890 119220 148610 188690 164880 219510 192950 207730 264290 207470 222870 285430 256160 257660 188620 315090 300740 327080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188670000 8485 1863 8028 16136;16137 12950 12950 1 9606 Homo sapiens -0.003941731653412717 FGFYEVFK Unmodified 1035.5066 0.50656873 669 Q8NCF7;A0A024RBE8;A0A024RBH9;Q00325-2;Q00325;F8VVM2;Q53HC3;B2RE88;F8VWR4;F8VWQ0 SLC25A3 Phosphate carrier protein, mitochondrial yes no 0 0 0 2.5 0.5 1 1 63.202 63.222 3 0.010015 20075 20230619_1881_Aki_TMTPro18x_K_F2 75.213 44.643 56262 50242 56083 61603 76926 80104 68633 63496 63373 39796 41039 33606 38542 35472 44916 42396 41516 42115 52052 46078 57329 61502 77968 79224 69496 65397 63920 41359 43029 34521 39746 36892 45360 42487 39759 40002 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85756000 8486 669 8029 16138;16139 12951 12951 1 9606 Homo sapiens -0.009764294714386779 FGGALDAAAK Unmodified 919.47633 0.47633123 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 7.2 0.748 1 2 2 50.825 50.902 2;3 4.5007E-05 13947 20230619_1887_Aki_TMTPro18x_K_F7 147.51 82.448 732770 593420 592250 600070 560330 606840 609670 593240 644780 743270 831600 741730 862760 698750 703450 919310 860270 722240 676450 543480 612790 605990 586130 613250 613290 611110 662690 742950 845020 752290 871760 733700 727930 908690 820630 688580 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2218300000 8487 161 8030 16140;16141;16142;16143;16144 12952;12953;12954 12952 3 9606 Homo sapiens 0.013372118633697028 FGGEHVPNSPFQVTALAGDQPSVQPPLR Unmodified 2944.4832 0.48315453 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4;Q6NXF2;H0Y5F3 FLNA;FLJ00119 Filamin-A yes no 0 0 0 1 0 1 60.654 60.654 3 8.8697E-39 18738 20230619_1880_Aki_TMTPro18x_K_F1 196.02 184.37 16304 12481 14735 16907 24497 31605 20622 21139 31981 19456 22975 27889 24901 20830 23604 21842 27120 30594 15058 11465 15266 16885 24632 30583 21351 22265 31541 20044 24112 27673 25297 21783 24209 22427 25938 28953 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46907000 8488 3484 8031 16145 12955;12956 12955 2 9606 Homo sapiens 0.0886922774161576 FGGGNPELLTQMVSK Oxidation (M) 1592.7868 0.78684269 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 1 0 4.5 3.5 1 1 55.899 55.93 3 0.00068999 16092 20230619_1888_Aki_TMTPro18x_K_F8 76.358 58.262 173000 152570 167980 187900 179500 216350 203680 210090 244150 199520 221200 210380 210090 182910 233510 216940 225940 232080 160000 139940 171390 187220 186380 216410 205210 214750 245350 202610 227540 212240 215910 191380 236530 218370 216290 220250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 252820000 8489 2908 8032 16146;16147 12957;12958;12959 12958 1730 3 9606 Homo sapiens 0.014160739463477512 FGGGNPELLTQMVSK Unmodified 1576.7919 0.79192806 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 1 0 1 61.977 61.977 3 0.00067623 19275 20230619_1880_Aki_TMTPro18x_K_F1 81.632 31.523 36597 35662 40096 41960 35359 41283 49362 43460 54123 46792 48895 53195 51195 37840 41932 52147 45954 55872 33907 32684 40392 41861 37481 41849 49089 44364 54629 47307 50535 53181 51700 40324 43085 52346 43998 52992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189200000 8490 2908 8032 16148 12960 12960 1 9606 Homo sapiens 0.026603778089793195 FGGNPGGFGNQGGFGNSR Unmodified 1725.7608 0.76077937 291 Q13148;A0A0A0N0L3;A0A024R4E2;A0A087WX29;B4DRW3;Q13148-4 TARDBP;TDP43 TAR DNA-binding protein 43 yes no 0 0 0 3.5 0.5 1 1 49.916 49.971 3 1.463E-48 14106 20230619_1882_Aki_TMTPro18x_K_F3 221.85 215.45 341200 311980 316710 348000 310070 397700 381820 391280 417690 409650 369880 417140 455480 383470 432850 503480 399550 459070 315540 285850 323960 349230 325010 398170 381940 400610 421780 413260 385920 422010 461030 402970 439130 501340 383020 436280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 954990000 8491 291 8033 16149;16150 12961;12962 12961 2 9606 Homo sapiens -0.0730705918088006 FGGPGAR Unmodified 660.33436 0.33435844 3200 M0R210;P62249 RPS16 40S ribosomal protein S16 yes no 0 0 0 5.4 2.42 1 1 1 1 1 34.371 34.412 2 0.035604 7052 20230619_1887_Aki_TMTPro18x_K_F7 92.723 92.723 594550 328010 638650 696600 780430 811520 700810 787440 888140 612040 873680 928120 920900 833290 764540 526710 1209200 1180200 548980 303670 647480 673990 797050 810710 717310 801350 892480 638070 899310 924110 931730 847170 803250 571550 1152500 1114100 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 555630000 8492 3200 8034 16151;16152;16153;16154;16155 12963;12964;12965;12966;12967 12966 5 9606 Homo sapiens -0.009395363682870084 FGGPVHHQAQR Unmodified 1232.6163 0.61628738 3938 Q15717;Q15717-2 ELAVL1 ELAV-like protein 1 yes no 0 0 0 4.5 3.5 1 1 23.197 23.219 3 1.2485E-09 3827 20230619_1888_Aki_TMTPro18x_K_F8 209.03 177.66 35905 28717 36386 37492 47326 52374 48648 47454 67781 13960 18645 18606 13269 12651 22764 16893 22072 13034 33199 26365 37100 37331 48358 51700 49509 47924 65815 16149 21222 18512 14203 13451 22907 16715 21063 12454 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39882000 8493 3938 8035 16156;16157 12968;12969 12969 2 9606 Homo sapiens 0.009283889204425577 FGGSGSQVDSAR Unmodified 1166.5316 0.53161428 3840 Q59EG8;Q13200;B4DM22;Q9NSM5;Q13200-3;Q13200-2 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 4 0.816 1 1 1 36.524 36.588 2 1.6053E-17 8131 20230619_1883_Aki_TMTPro18x_K_F4 230.05 212.95 217820 139850 182840 206830 252140 256280 237310 231520 307340 237350 267860 253760 282990 216490 223070 205570 302410 250860 200870 128700 189820 203910 256050 254800 242200 238380 307370 240230 277160 255550 285400 224150 232120 209380 288220 237970 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 405840000 8494 3840 8036 16158;16159;16160 12970;12971;12972 12971 3 9606 Homo sapiens -0.044990264068019314 FGGVQELLNQQK Unmodified 1359.7147 0.71466402 738 H7C5Q1;C9J5P1;C9JXC3;C9JNE2;A0A024RCY9;Q9Y530 OARD1;C6orf130 O-acetyl-ADP-ribose deacetylase 1 yes no 0 0 0 2 0 1 60.204 60.216 3 0.00014369 18718 20230619_1881_Aki_TMTPro18x_K_F2 105.36 86.116 35583 27478 32633 35700 32639 37661 33461 37489 42752 35448 46938 46010 46363 42903 48256 44130 41309 51225 32868 25230 33412 35400 33961 37922 34000 38255 43154 36271 47937 46145 47435 44410 48635 44741 39660 48542 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76954000 8495 738 8037 16161 12973 12973 1 9606 Homo sapiens 0.0491952765496535 FGIDDQDFQNSLTR Unmodified 1654.7587 0.75871368 3599 P48426;P48426-2 PIP4K2A Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha yes no 0 0 0 4.67 0.471 1 2 58.674 58.703 2;3 2.1097E-16 17800 20230619_1883_Aki_TMTPro18x_K_F4 166.03 155.93 32969 30722 37201 33968 35850 41599 37045 37716 50207 40275 40637 37951 43593 33298 42065 47001 38332 45026 30545 28144 37399 34156 37403 41402 37695 38859 50000 40521 42256 38502 44298 35245 42627 46884 36758 42762 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50080000 8496 3599 8038 16162;16163;16164 12974;12975 12974 2 9606 Homo sapiens -0.04247532709337065 FGIEPNAELIYEVTLK Unmodified 1834.9717 0.97166657 3853 Q53GX4;Q2TA84;Q13451;B7Z8G2;B7Z7Z8 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes no 0 0 0 7 0 1 64.944 64.971 3 0.022922 20125 20230619_1887_Aki_TMTPro18x_K_F7 51.193 37.036 16004 12932 19337 16961 17751 18553 19177 18584 20100 22536 21364 21966 24059 23348 22005 21917 23062 31585 14823 11873 19326 16824 18582 18643 19291 19089 20495 22547 21985 22363 24390 23970 22472 22588 22114 29866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153790000 8497 3853 8039 16165 12976 12976 1 9606 Homo sapiens 0.08757960297793943 FGISEPGNQEK Unmodified 1204.5724 0.57241646 3613 P49792;A0A8V8TLN4;A0A8V8TMN6;A6NKT7;J3KNE0;Q7Z3J3;A0A8Q3SIN4;B4DYH0;F8VYC4;A0A286YES2;Q99666;O14715;P0DJD1;P0DJD0;A0A8Q3SII4;A0A8Q3SII5;J3KQ37;V9HWE4;B4DTT2;B4E0M7;B4DZH4 RANBP2;RGPD3;RGPD4;RGPD1;RGPD5;RGPD8;RGPD2;HEL161 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 1 yes no 0 0 0 4 0 1 47.607 47.647 3 0.00091552 12910 20230619_1883_Aki_TMTPro18x_K_F4 102.53 75.202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8498 3613 8040 16166 12977 12977 1 9606 Homo sapiens -0.021686850871901697 FGISSVPTK Unmodified 934.51238 0.51238239 3766 P82979;Q567R9;H0YHG0;F8VZQ9;A4D286 SARNP;CIP29;LOC402290 SAP domain-containing ribonucleoprotein yes no 0 0 0 2.5 0.5 2 2 52.066 52.119 2;3 0.00076507 15077 20230619_1882_Aki_TMTPro18x_K_F3 93.551 72.649 232840 177160 205090 221520 205780 229310 214840 219410 259140 238000 258080 233380 271710 195990 234320 265120 255420 263550 214990 162610 210730 220170 214090 231070 217530 225340 261410 239430 265230 236030 274860 207240 240270 265120 244240 250310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 840210000 8499 3766 8041 16167;16168;16169;16170 12978;12979 12979 2 9606 Homo sapiens 0.04250669040243338 FGIVTSSAGTGTTEDTEAK Unmodified 1870.8796 0.87961668 3766 P82979;Q567R9;H0YHG0;A4D286 SARNP;CIP29;LOC402290 SAP domain-containing ribonucleoprotein yes no 0 0 0 4.5 0.5 1 1 52.258 52.306 3 2.2043E-31 15024 20230619_1883_Aki_TMTPro18x_K_F4 232.78 216.9 121010 87618 97197 113100 93030 124090 118500 110490 137860 144680 141480 140990 148350 127530 132380 168190 148670 159750 111630 80464 100780 112230 97894 124280 118580 114750 139540 144290 145280 142870 150450 134130 136000 167770 142160 151780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 801190000 8500 3766 8042 16171;16172 12980 12980 1 9606 Homo sapiens -0.020987945771821614 FGIVTSSAGTGTTEDTEAKK Unmodified 1998.9746 0.9745797 3766 P82979;Q567R9;H0YHG0;A4D286 SARNP;CIP29;LOC402290 SAP domain-containing ribonucleoprotein yes no 0 0 1 6 0 1 49.058 49.136 3 4.1514E-12 13547 20230619_1886_Aki_TMTPro18x_K_F6 143.46 120.63 34291 25344 35524 33835 31144 37667 37439 34598 38652 44884 48818 42922 47322 32819 40302 46302 43428 41154 31699 23281 35913 33523 32881 37717 37436 35838 39730 44734 49496 43340 47953 34929 41311 46008 41506 39152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70228000 8501 3766 8043 16173 12981 12981 1 9606 Homo sapiens 0.015051388940037214 FGIYDIDNK Unmodified 1083.5237 0.52367535 2180 Q99829;B0QZ18;F2Z2V0;A6PVH9;E7ENH5;Q59EI4;Q5JX58;Q5JX59;Q5JX45;Q5JX60;Q5JX44;Q5JX56;Q5JX52;Q5JX61;Q5JX55;Q5JX54;E7EV27;Q5JX57 CPNE1 Copine-1 yes no 0 0 0 6 0.816 1 1 1 58.177 58.236 2 0.00048273 17348 20230619_1886_Aki_TMTPro18x_K_F6 153.08 96.528 166180 124880 145790 161440 146560 182930 170010 167400 197920 197000 207440 251770 256460 235480 194550 266550 261830 316420 153420 114660 149930 160280 153050 182920 170930 172920 200490 199220 214780 252490 257430 245050 203050 269920 250240 299800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 182600000 8502 2180 8044 16174;16175;16176 12982;12983 12983 2 9606 Homo sapiens -0.014745536562941197 FGLESHAHTIQICK Unmodified 1639.8141 0.81406049 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7;A0A0G2JIC2 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 1.5 0.5 1 1 46.231 46.271 4 8.5517E-07 12873 20230619_1880_Aki_TMTPro18x_K_F1 134.08 105.27 22529 17215 20365 24817 26348 31365 27979 25071 32487 22435 28876 24002 26245 23833 28485 27210 30052 25838 20807 15826 20991 24503 26965 31059 28238 25987 32652 22893 29656 24323 26990 24759 29004 27221 28709 24571 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 312590000 8503 1296 8045 16177;16178 12984 12984 1 9606 Homo sapiens 0.01974602277437043 FGLGSVAGAVGATAVYPIDLVK Unmodified 2104.1568 0.15684158 4002 Q53GR7;Q9UJS0;Q9UJS0-2;B7Z2E2 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes no 0 0 0 4 0 1 65.167 65.176 3 0.0070507 20509 20230619_1883_Aki_TMTPro18x_K_F4 58.564 45.364 4732.8 5017.5 5545.1 5607.6 3764.6 4358.2 6185 4194.3 5380.5 3829.6 5165.6 4990.7 8386.1 5506.7 6455.1 5445.2 5314.8 5508.2 4390.6 4595.1 5540.2 5600.6 4111.5 4500.1 6068.2 4297.2 5512 3930.3 5450.7 5035.7 8350.9 5667 6528.8 5480.8 5097.5 5230.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7372300 8504 4002 8046 16179 12985 12985 1 9606 Homo sapiens 0.14892943097447642 FGLNVSSISR Unmodified 1078.5771 0.57710791 3766 P82979;Q567R9;H0YHG0;F8VZQ9;A4D286 SARNP;CIP29;LOC402290 SAP domain-containing ribonucleoprotein yes no 0 0 0 4 0 1 52.887 52.91 2 1.2296E-06 15276 20230619_1883_Aki_TMTPro18x_K_F4 176.33 92.327 347690 311660 315370 326340 327080 403160 347050 359890 410540 184640 164270 126900 147440 125850 261840 157910 163960 119790 321440 285410 323330 329510 339850 400820 350640 365910 404140 194690 179410 131680 156490 131550 258250 156400 157520 114340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 672670000 8505 3766 8047 16180 12986 12986 1 9606 Homo sapiens 0.04096243846242942 FGLTTSR Unmodified 780.413 0.41300269 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;B1AHB2 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 2.5 0.5 1 1 42.98 43.054 2 0.02054 10942 20230619_1882_Aki_TMTPro18x_K_F3 104.45 27.601 648440 507320 543000 612660 603270 648140 680200 631610 752200 712280 785520 675960 696440 568990 640590 673780 716350 588860 598620 465440 561710 610540 624050 652450 683480 648700 763300 714480 799670 684520 710800 596000 656700 670680 683790 560670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 317830000 8506 2188 8048 16181;16182 12987;12988;12989 12989 3 9606 Homo sapiens 0.014012711461418803 FGMTPSK Oxidation (M) 782.36328 0.36327531 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;Q9NTC4;Q9HAP0 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 1 0 1.5 0.5 1 1 41.907 41.946 2 0.060611 10958 20230619_1880_Aki_TMTPro18x_K_F1 72.875 39.946 279860 223810 279460 292990 381450 428950 354970 375400 442550 282470 355240 335090 322620 252300 350420 328700 378260 339710 258740 205480 285570 291910 387620 422080 362080 384570 441820 292340 367090 335250 331560 267100 357240 329780 361380 322680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137300000 8507 3656 8049 16183;16184 12990 12990 2358 1 9606 Homo sapiens -0.03661179854157126 FGMTPSK Unmodified 766.36836 0.36836069 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;Q9NTC4;Q9HAP0 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 2 0 1 46.831 46.906 2 0.039727 13004 20230619_1881_Aki_TMTPro18x_K_F2 90.862 51.644 433000 360360 389820 438620 612160 713730 570080 555630 776460 373820 370390 359210 426510 324630 465080 436210 458730 351150 400090 330560 403350 439940 617890 697000 583000 573510 762030 388080 401660 364540 435330 341960 471680 431940 438220 334820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214620000 8508 3656 8049 16185 12991 12991 1 9606 Homo sapiens -0.02416875991548295 FGNAFHLCR Unmodified 1120.5236 0.52363255 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 4 0 1 46.45 46.494 3 5.9786E-06 12395 20230619_1883_Aki_TMTPro18x_K_F4 144.12 120.09 98506 84161 85793 76451 117350 156240 114480 118970 176820 35727 33878 40050 36536 38234 45361 35144 42794 36893 91013 76999 88673 78942 119690 151020 117380 121800 170440 41020 41657 40445 37750 39302 45768 35507 40929 35045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49373000 8509 1863 8050 16186 12992 12992 1 9606 Homo sapiens -0.03180832137263678 FGNDVQHFK Unmodified 1090.5196 0.51959303 1416 A0A384ME16;Q6ICN0;B0LPF3;P62993;B3KR50;J3KT38 GRB2 Growth factor receptor-bound protein 2 yes no 0 0 0 7.5 0.5 1 1 45.025 45.082 3 0.00069012 11341 20230619_1887_Aki_TMTPro18x_K_F7 106.4 84.654 601370 483020 565540 583050 594610 590640 615960 646580 669500 709390 776620 779280 793850 707200 685800 850680 874720 817330 555730 443090 577910 580900 615460 598220 621790 658300 683520 715520 792470 785740 804880 739210 710580 850240 834710 776870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1084200000 8510 1416 8051 16187;16188 12993;12994 12993 2 9606 Homo sapiens -0.022045983593443452 FGNEITQLAR Unmodified 1147.5986 0.59857163 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;B4DG89 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 0 7.5 0.5 1 1 53.392 53.463 2 0.0015728 15034 20230619_1888_Aki_TMTPro18x_K_F8 112.3 87.123 284050 211880 220720 266760 237340 299060 280630 283940 349780 337140 320390 338120 386120 325530 274220 416430 381130 399340 262020 194500 230070 265250 246940 299510 282530 292510 351350 337990 332960 342850 386770 341020 287510 415610 363760 379410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280490000 8511 534 8052 16189;16190 12995 12995 1 9606 Homo sapiens 0.030676288749418745 FGNEVIPVTVTVK Unmodified 1401.7868 0.78676633 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHJ0;A0A5F9ZHD4;A0A5F9ZI66 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 2 0 1 61.178 61.189 3 1.8461E-05 19111 20230619_1881_Aki_TMTPro18x_K_F2 118.73 99.153 240790 209090 208190 232900 225520 248010 252930 258020 288640 254230 246750 268110 289640 257760 274500 311310 299930 318830 222490 191610 214610 233520 233720 249930 254530 262790 290360 257630 257220 271240 293660 269020 281010 312290 286850 302680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 857720000 8512 1208 8053 16191 12996 12996 1 9606 Homo sapiens 0.10194442008673832 FGNICVVR Unmodified 963.49602 0.49602082 3931 Q15393;A8K6V3;B3KQH1;B3KM77;Q15393-3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 3.5 0.5 1 1 49.813 49.868 2 0.022845 14092 20230619_1882_Aki_TMTPro18x_K_F3 86.472 62.704 360440 318060 331380 330840 368100 410830 449230 442600 431670 407780 398780 454770 489730 372650 406580 491450 468840 564630 333230 291280 339680 334380 381550 410180 447620 448930 439540 415310 415090 456750 492760 393710 418830 495730 448650 535160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 893410000 8513 3931 8054 16192;16193 12997 12997 1 9606 Homo sapiens 0.012812646024940477 FGNPGER Unmodified 775.3613 0.36130147 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 4 0.816 1 1 1 34.969 35.035 2 0.036792 7541 20230619_1883_Aki_TMTPro18x_K_F4 92.187 64.662 202950 124240 237260 237130 269340 281570 245360 261260 293490 233800 330950 364870 313350 305960 306790 174310 414670 387980 187630 114760 238610 230600 276430 280720 250410 267600 297450 241850 337260 362090 320400 310660 317240 189710 395520 366340 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 149570000 8514 1328 8055 16194;16195;16196 12998;12999 12998 2 9606 Homo sapiens -0.035364725477620595 FGNPLLVQDVESYDPVLNPVLNR Unmodified 2597.349 0.34895246 3881 Q14204;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 7 0.816 1 1 1 65.409 65.439 3 5.5255E-63 20265 20230619_1887_Aki_TMTPro18x_K_F7 271.72 264.62 53408 44745 47640 55127 47633 53513 51751 52457 60764 61559 68208 76839 72760 51537 61357 82696 68122 85069 49348 41049 48918 54794 49621 54216 52238 53926 61697 62167 69877 76460 73503 55682 63093 82655 65230 80711 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 417880000 8515 3881 8056 16197;16198;16199 13000;13001 13000 2 9606 Homo sapiens 0.11417193986926577 FGNTEQGFK Unmodified 1026.4771 0.47705951 3613 P49792;A0A8V8TLN4;A0A8V8TMN6 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 7 0 1 47.709 47.797 2 0.00046539 12598 20230619_1887_Aki_TMTPro18x_K_F7 152.86 95.755 117140 100570 110110 119970 200520 153420 149690 127780 171100 129980 142560 138520 149590 129690 130530 163650 155120 144390 108300 92219 113770 119980 199260 152210 154420 132420 171920 131630 147880 140030 151600 135810 134600 162740 148100 137390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50700000 8516 3613 8057 16200 13002 13002 1 9606 Homo sapiens -0.03511993487563814 FGNTPFLFPLYGQGEIPQGFCR Unmodified 2544.226 0.22600055 3507 P26374 CHML Rab proteins geranylgeranyltransferase component A 2 yes yes 0 0 0 5 0 1 65.531 65.574 3 6.0739E-05 20406 20230619_1885_Aki_TMTPro18x_K_F5 75.773 62.845 5362 3308.7 3265.3 2887.8 5335.8 6163.8 5383.3 3835.3 4250 3770.5 5493.7 5724.7 4675.2 4731.3 6831.3 5961.7 6093.6 8187.4 4934.4 3030.5 3521.4 2995.6 5383.8 5932.2 5385.3 4080 4439.4 3876.5 5549.6 5693.1 4904.3 4977.1 6864 6097.1 5851.9 7745.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9724500 8517 3507 8058 16201 13003 13003 1 9606 Homo sapiens 0.01565659054676871 FGPALSVK Unmodified 817.46979 0.46978929 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;A0A024R9E2;Q3ZCS4;Q9H361;Q5VX58;Q2VIP3;H0YBN4;H0YAP2 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 yes no 0 0 0 3 0.816 1 1 1 53.27 53.304 2 0.0026042 15478 20230619_1883_Aki_TMTPro18x_K_F4 124.08 23.628 873740 767960 704110 705720 890200 1193900 518820 905880 1160600 181080 162890 135660 164040 123740 394520 224970 203680 131560 807000 702590 732030 724600 903720 1163300 565000 924570 1103400 222530 214170 140300 178620 133350 385620 219770 196230 126210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 463870000 8518 566 8059 16202;16203;16204 13004;13005 13005 2 9606 Homo sapiens 0.0537531870265866 FGPIPLGSLGWK Unmodified 1270.7074 0.7073938 1508 Q9BTT5;A0A3B3ISG8;Q16795;A8K4V2 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 6 0 1 64.08 64.127 2 6.9904E-07 19986 20230619_1886_Aki_TMTPro18x_K_F6 180.67 140.41 62245 64462 60773 69386 80908 95680 81062 81061 87887 58280 57264 48484 60723 55381 63516 57891 62709 51589 57640 59020 62231 70014 82501 94415 81900 83192 87858 59901 60312 49956 62036 57018 64457 57814 59930 49107 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27069000 8519 1508 8060 16205 13006 13006 1 9606 Homo sapiens 0.08286839845209215 FGPLTPELMVPR Unmodified 1355.7271 0.72714296 2029 Q6LES9;A8K3S0;P40937;A8K4Z2;Q59GW7;P40937-2;F5H5S0 RFC5 Replication factor C subunit 5 yes no 0 0 0 2.5 0.5 1 1 62.8 62.819 2 0.00025752 19590 20230619_1882_Aki_TMTPro18x_K_F3 123.79 107.9 128200 100790 129350 105910 95002 122860 108320 130830 122820 125360 129240 111800 130710 109120 127090 149060 121750 125790 118520 92347 130640 106890 101910 123120 109050 132860 124580 126540 132260 114160 133160 114750 129130 147790 116570 119710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143100000 8520 2029 8061 16206;16207 13007 13007 1 9606 Homo sapiens 0.06350847793646608 FGPLVEQGQSR Unmodified 1216.62 0.62003536 2790 CON__Q03247 yes yes 0 0 0 7.5 0.5 1 1 48.538 48.615 3 1.7921E-05 12937 20230619_1887_Aki_TMTPro18x_K_F7 141.1 125.72 + 76968 68369 78051 66574 86820 96846 86460 82448 114800 90870 101230 120450 98146 83330 103100 115280 123410 133300 71217 62576 79261 67842 89529 95341 88059 85444 114730 92327 104510 119640 100540 88875 105940 116290 117950 126380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 74024000 8521 2790 8062 16208;16209 13008;13009 13008 2 9606 Homo sapiens 0.020390139036408073 FGPYESYDSR Unmodified 1219.5146 0.51456723 4029 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 0 3.5 0.5 1 1 47.764 47.824 2 1.1895E-09 12972 20230619_1883_Aki_TMTPro18x_K_F4 208.72 187.77 194420 159040 177850 201150 187940 210030 206860 209970 221400 276670 285880 259790 305710 241090 241090 325080 292360 288620 179650 145950 182340 199780 194980 211710 208010 216270 227550 275430 290900 264050 308180 253810 249590 323030 279200 274530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 348270000 8522 4029 8063 16210;16211 13010;13011 13011 2 9606 Homo sapiens -0.08640947012622746 FGQAATMEGIGAIGGTPPAFNR Oxidation (M) 2178.0528 0.052787212 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7I2V4K9 NONO Non-POU domain-containing octamer-binding protein yes no 0 1 0 2 0.707 1 2 1 59.091 59.11 3 1.4668E-37 18028 20230619_1881_Aki_TMTPro18x_K_F2 218.72 206 44955 31076 41035 41506 40870 46922 47353 43672 44898 43046 48460 46921 49841 45448 48007 59655 51179 56526 41499 28555 42015 41128 42647 46950 47297 44837 46013 43663 49614 47455 50760 47659 49092 59508 48974 53702 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 881050000 8523 1112 8064 16212;16213;16214;16215 13012;13013;13014 13013 687 3 9606 Homo sapiens 0.010882929982471978 FGQAATMEGIGAIGGTPPAFNR Unmodified 2162.0579 0.05787259 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7I2V4K9 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 2.5 0.5 1 1 61.759 61.778 3 1.0182E-38 19152 20230619_1882_Aki_TMTPro18x_K_F3 241.65 225.51 118960 98566 96608 124820 103630 114600 117410 121830 120150 122660 114360 89468 108810 104000 117920 151720 134080 125190 109840 90452 100270 123740 107500 116820 117680 123980 122060 122910 117240 93020 111780 109270 120830 150100 128070 119220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2655000000 8524 1112 8064 16216;16217 13015;13016 13016 2 9606 Homo sapiens 0.02332596860878766 FGQDFSTFLEAGVEMAGQAPSQEDR Unmodified 2716.2075 0.20750953 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 5 0 1 65.882 65.925 3 1.2736E-19 20538 20230619_1885_Aki_TMTPro18x_K_F5 146.5 139.51 2785.1 3227.9 2154.8 3040 2583.5 2729.3 1963.2 3526.1 4055.9 2780.8 4386.4 3033.8 3156.2 3038 2868.3 2369.3 3227.1 3629.5 2577.2 2951.2 2252.1 3083.5 2638.5 2804.1 2084.4 3523.2 4018.7 2859.7 4419.5 3073.3 3248.4 3098.9 2939 2464.2 3087 3432.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9783200 8525 1292 8065 16218 13017 13017 1 9606 Homo sapiens -0.08194592168501913 FGQGDLPKPINSDFR Unmodified 1689.8475 0.84746911 3613 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 1 1 0 1 53.622 53.622 3 1.8954E-05 15815 20230619_1880_Aki_TMTPro18x_K_F1 110.06 89.111 78520 59904 72397 84847 81633 88266 79637 79730 84304 83047 89526 72972 85822 78269 88321 82832 73888 78003 72528 55057 74259 83637 84005 88785 80580 82144 85841 83468 91354 74782 87833 80786 88944 82930 70864 74124 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59921000 8526 3613 8066 16219 13018 13018 1 9606 Homo sapiens 0.030139273209670137 FGQGGAGPVGGQGPR Unmodified 1340.6585 0.65854613 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 4.5 3.04 1 1 1 1 40.638 40.672 2;3 2.6138000000000003E-25 10332 20230619_1880_Aki_TMTPro18x_K_F1 169.09 158.48 269050 205240 229540 250640 266830 302150 299020 267870 317950 268870 289500 299790 302360 268690 278590 355600 325130 334330 248380 188340 237190 250040 275200 300820 300090 276150 321570 272760 299030 302050 307200 282680 286710 354530 310700 317740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2334300000 8527 1450 8067 16220;16221;16222;16223 13019;13020;13021 13019 3 9606 Homo sapiens 0.0018431953817525937 FGQLTYVR Unmodified 982.52362 0.52361577 2867;2868 E5KND5;Q96RP9;Q96RP9-2;C9IZ01;D3DNL3;F8WAU4;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 0 3.5 0.5 1 1 50.576 50.63 2 0.07499 14342 20230619_1883_Aki_TMTPro18x_K_F4 67.494 43.937 114460 105890 104690 105460 156300 219650 156870 153620 262930 77728 71993 74182 83429 72966 88303 85427 74825 80111 105850 96925 108030 108040 158890 211800 161150 159370 253650 82987 83364 75507 85117 75955 88949 85368 71759 76126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104620000 8528 2867;2868 8068 16224;16225 13022 13022 1 9606 Homo sapiens 0.03165491134370768 FGQMLGSNMTEFHSQISK Unmodified 2040.9397 0.93973129 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2.5 0.5 1 1 58.226 58.248 3 7.0896E-14 17716 20230619_1882_Aki_TMTPro18x_K_F3 157.62 135.14 73217 71151 78620 79433 62451 67645 77444 69030 60171 89625 76147 70225 85108 70612 85491 75234 76883 85665 67822 65178 79173 79422 66466 69372 76727 71019 63070 88826 77766 72156 86557 73125 86395 76150 73705 81223 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25828000 8529 3881 8069 16226;16227 13023 13023 1 9606 Homo sapiens -0.03910098719279631 FGQQNPR Unmodified 845.4144 0.41439968 2690 B7Z592;Q8WU90;F8WF67;F8WB26 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes no 0 0 0 7 0.816 1 1 1 32.503 32.546 2 0.007123 6323 20230619_1887_Aki_TMTPro18x_K_F7 127.66 108.18 78550 42305 89025 93695 112230 113900 83212 105300 94676 65144 90351 87485 82210 72029 86224 39449 100150 73017 72559 39199 89907 90561 113870 113360 86035 107040 95538 68697 92544 87236 84374 73115 88095 42220 95503 69096 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72056000 8530 2690 8070 16228;16229;16230 13024;13025 13024 2 9606 Homo sapiens -0.014490947650983799 FGQVYTEAK Unmodified 1041.5131 0.51311067 247 A0A024R3J7;P46977;P46977-2 hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 0 0 6.8 0.748 2 2 1 49.38 49.461 2;3 0.0001732 13318 20230619_1888_Aki_TMTPro18x_K_F8 134.25 62.746 320600 289820 344160 372180 430780 500530 473270 435900 549950 419340 454980 460720 476570 399170 415390 538800 522260 486440 296820 265910 349250 370670 441910 494770 476810 449360 551720 426270 472240 464030 482940 421070 430040 535910 498410 462710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 652570000 8531 247 8071 16231;16232;16233;16234;16235 13026;13027;13028 13028 3 9606 Homo sapiens -0.005985363107356534 FGQYNKEDPTSFR Unmodified 1587.7318 0.73177065 1375 B4DRA5;B4DJW8;A0A2R8YFH5;Q15437;Q5QPE1;B4DS04 SEC23B Protein transport protein Sec23B yes no 0 0 1 8 0 1 47.689 47.747 3 0.0093943 12565 20230619_1888_Aki_TMTPro18x_K_F8 66.485 53.285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8532 1375 8072 16236 13029 13029 1 9606 Homo sapiens -0.0385859652990348 FGSAIPIPSLPDK Unmodified 1340.734 0.73400248 1696 A0A7P0T8Z7;A0A7P0Z4A2;A0A7P0Z4A5;A0A7P0T8D4;B2RAU5;A0A7P0T8S8;A0A7P0T8Z2;A0A7P0T8C7;Q9Y5X1;B3KXH8;A0A7P0TBI9;Q59ES5;O95061 SNX9;WISP Sorting nexin;Sorting nexin-9 yes no 0 0 0 2 0 1 62.639 62.648 3 0.0045543 19810 20230619_1881_Aki_TMTPro18x_K_F2 70.68 50.298 73887 55916 68288 67651 63052 76156 66179 71015 77596 78949 80433 71360 86564 70464 76007 95758 83512 84293 68246 51308 69751 67482 66074 76235 66945 73096 78546 79141 82592 72835 87633 74061 78000 95120 79837 80180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35478000 8533 1696 8073 16237 13030 13030 1 9606 Homo sapiens 0.07726483945884866 FGSALVPTGNLQLR Unmodified 1471.8147 0.81471242 4465 Q9BXR0;B2RAR3;K7EL95;Q71RF8 QTRT1 Queuine tRNA-ribosyltransferase yes no 0 0 0 5 0 1 60.277 60.329 2 8.917E-05 18023 20230619_1885_Aki_TMTPro18x_K_F5 110.74 89.215 76228 65220 71522 76655 69961 85369 79850 78069 97000 91915 105590 123190 97723 101790 115050 108240 121070 147080 70470 59799 73065 76595 73156 85490 80481 80657 98151 93116 107750 122850 100950 106010 116990 110860 115960 139190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104540000 8534 4465 8074 16238 13031 13031 1 9606 Homo sapiens 0.09767764988805538 FGSEFSPELQASFQK Unmodified 1700.8046 0.80460124 2797 CON__Q3SX09 yes yes 0 0 0 7 0.816 1 1 1 61.828 61.868 3 1.0283E-18 18620 20230619_1887_Aki_TMTPro18x_K_F7 198.29 181.55 + 357690 418430 509310 575400 769500 1017100 581730 683190 1114900 1054800 1665000 2267500 1159300 1555300 2013900 1254200 1679600 2778000 332800 383910 509280 573350 775720 986660 614350 730940 1126000 1083200 1665500 2219700 1243100 1610700 2010600 1352600 1617900 2618400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5010100000 8535 2797 8075 16239;16240;16241 13032;13033 13032 2 9606 Homo sapiens -0.017768875271030993 FGSGMNMGR Oxidation (M) 971.39532 0.39532049 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4;M0QYL3 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 1 0 7.5 0.5 1 1 37.308 37.333 2 0.038442 8383 20230619_1888_Aki_TMTPro18x_K_F8 67.169 60.805 77141 63581 62281 68822 96791 100340 97570 91598 119470 79647 86396 89691 91458 77394 89266 92367 105980 91390 71220 58260 65071 69499 97839 98899 98920 93846 119040 81528 90455 90203 93114 81024 91741 92524 101140 86867 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86830000 8536 3194;3631 8076 16242;16243 13034 13034 1855 1 9606 Homo sapiens -0.09152135442661802 FGSLLPIHPVTSG Unmodified 1323.7187 0.71868677 1720 Q15257;Q15257-2;Q15257-3;A0A804CD06;A6PVN5;F6WIT2;Q15257-4;Q68CR8;B7ZBQ0 PPP2R4;DKFZp781M17165 Serine/threonine-protein phosphatase 2A activator yes no 0 0 0 3 0 1 62.192 62.221 2 0.0038602 19327 20230619_1882_Aki_TMTPro18x_K_F3 85.744 61.976 76937 65789 71566 90588 71890 86756 81613 87510 94090 104770 102690 100640 100890 89455 94650 107230 103430 117080 71121 60420 73275 89353 74990 88003 82142 89807 95549 104800 104870 101980 102750 93596 96916 107980 98967 111050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 272200000 8537 1720 8077 16244 13035 13035 1 9606 Homo sapiens 0.0697761714866374 FGSNINLEADES Unmodified 1294.5677 0.56772501 4575 Q9NQP4;B2R548 PFDN4 Prefoldin subunit 4 yes no 0 0 0 1.5 0.5 1 1 58.108 58.115 2 0.00021505 17883 20230619_1881_Aki_TMTPro18x_K_F2 116.3 106.35 50134 50665 50086 53327 48370 64458 58633 58183 70932 56565 60651 59135 62982 54999 65242 69593 65847 67752 46426 46382 50896 53800 50754 64181 58898 59828 71104 57369 62819 59815 64330 57632 66361 69585 63010 64364 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 237720000 8538 4575 8078 16245;16246 13036;13037 13037 2 9606 Homo sapiens -0.06777614020643341 FGSTADALVSDDETTR Unmodified 1683.7588 0.75877326 4038 Q5JRA6-2;Q5JRA6;Q5JRA6-3 MIA3 Melanoma inhibitory activity protein 3 yes no 0 0 0 2 0 1 52.237 52.276 2 2.2705E-08 15464 20230619_1881_Aki_TMTPro18x_K_F2 142.85 135.96 10960 11722 11880 14556 11514 13277 13840 15403 17259 11082 13188 14699 14601 13214 12993 16427 14581 16282 10161 10745 12005 14450 12057 13569 13926 15475 17203 11550 13794 14717 14790 13842 13348 16438 13947 15460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16698000 8539 4038 8079 16247 13038 13038 1 9606 Homo sapiens -0.05575577500030704 FGSVPHGGFGMGFER Oxidation (M) 1596.7143 0.71434645 1793 Q96I59;A0A8Q3SHT5;B3KPX5;A0A8Q3SHL5;B2RD66;A0A8Q3WKE5;H0YE96;A0A8Q3WKD2;Q96I59-2;A0A8Q3WKX6 NARS2 Probable asparagine--tRNA ligase, mitochondrial yes no 0 1 0 1 0 1 48.881 48.881 3 0.00062647 13896 20230619_1880_Aki_TMTPro18x_K_F1 78.326 60.581 35468 26836 33408 36800 41778 36937 38538 40866 37993 41508 48077 42179 47693 40899 42670 44382 48483 47246 32765 24657 34242 36344 42569 37449 39048 41488 39157 41921 48795 42774 48448 42420 43807 44704 46323 44849 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49377000 8540 1793 8080 16248 13039 13039 1159 1 9606 Homo sapiens -0.060142153365177364 FGSVPHGGFGMGFER Unmodified 1580.7194 0.71943182 1793 Q96I59;A0A8Q3SHT5;B3KPX5;A0A8Q3SHL5;B2RD66;A0A8Q3WKE5;H0YE96;A0A8Q3WKD2;Q96I59-2;A0A8Q3WKX6 NARS2 Probable asparagine--tRNA ligase, mitochondrial yes no 0 0 0 2 0 1 53.009 53.042 3 0.0060395 15777 20230619_1881_Aki_TMTPro18x_K_F2 68.283 57.071 69831 57964 73689 67956 52954 81102 69722 81141 89574 83635 85071 87679 90802 79903 83528 97635 82171 109260 64606 53151 74214 68016 57295 80957 70001 82910 89932 84522 87761 88582 92159 83627 85080 98431 78822 103550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39984000 8541 1793 8080 16249 13040 13040 1 9606 Homo sapiens -0.04769911473886168 FGTEELFK Unmodified 969.48075 0.48074791 1005;1857 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;Q8TDI0;A0A2R8Y5M9;K7EMY3;Q659D0;Q659F1;B3KRD4;A0A8V8TR54;Q12873;Q12873-3;Q12873-2;B4DLC6;A0A5F9ZHX5 CHD4;CHD5;DKFZp434P202;DKFZp434K213;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3 no no 0 0 0 6 0 1 58.723 58.788 2 0.021462 17614 20230619_1886_Aki_TMTPro18x_K_F6 82.279 45.258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8542 1005;1857 8081 16250 13041 13041 1 9606 Homo sapiens -0.00521323713712718 FGTEWAQNTIVPK Unmodified 1489.7565 0.75652884 2118 A8K8B0;P30154;P30154-2;P30154-4;P30154-3;B7Z1G3;P30154-5 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 1.5 0.5 1 1 60.577 60.583 3 5.0968E-06 18874 20230619_1881_Aki_TMTPro18x_K_F2 94.747 60.135 54974 44981 50978 53409 49074 57651 58803 60771 55630 65406 56774 58907 67247 53774 51453 69056 63467 68322 50803 41253 52111 53317 51401 58043 58647 61976 56974 65624 58663 59920 67535 56472 53360 69053 60643 64882 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 197040000 8543 2118 8082 16251;16252 13042;13043 13043 2 9606 Homo sapiens 0.03124083343482198 FGTFPGNYVAPV Unmodified 1267.6237 0.62372375 2603 B4DVR4;O60504-2;O60504;Q9BT70 SORBS3 Vinexin yes no 0 0 0 1.5 0.5 1 1 64.23 64.234 2 0.0003981 20507 20230619_1881_Aki_TMTPro18x_K_F2 109.48 77.008 16270 13335 15054 13849 12866 17862 13627 16615 15047 19695 19696 19302 19996 18605 19233 21589 21183 26718 15036 12215 15355 14007 13591 17725 13760 17127 15455 19719 20001 19592 20372 19377 19694 21924 20287 25302 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55716000 8544 2603 8083 16253;16254 13044 13044 1 9606 Homo sapiens 0.0006168367751797632 FGTINIVHPK Unmodified 1124.6342 0.63422886 183 A0A024R222;B4DHQ3;Q9Y617;A0A024R280;Q9Y617-2 PSAT1 Phosphoserine aminotransferase yes no 0 0 0 4 0 1 50.131 50.165 3 0.00012281 14087 20230619_1883_Aki_TMTPro18x_K_F4 119.53 83.987 221400 178750 237420 137200 149140 144650 149590 169520 133100 222560 227690 261320 231550 190720 304610 230770 226220 277880 204830 163380 237810 142560 161660 146560 150710 172800 140680 222970 229760 260950 239490 201260 303750 234130 217560 263250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 475420000 8545 183 8084 16255 13045 13045 1 9606 Homo sapiens 0.07689711122611698 FGTLLSGSWDTTAK Unmodified 1482.7355 0.73545904 4702 Q9Y263;E5RIM3;H0YAU9 PLAA Phospholipase A-2-activating protein yes no 0 0 0 2.5 0.5 1 1 62.815 62.835 3 1.863E-08 19596 20230619_1882_Aki_TMTPro18x_K_F3 145.6 116.64 179910 148470 166350 177200 145760 186930 190490 186700 206960 183730 175140 169710 183500 155480 190260 195320 175870 184780 166260 136160 169910 176750 154460 188230 189990 190680 208590 185450 181580 172500 187330 162960 192590 195040 168470 175580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108280000 8546 4702 8085 16256;16257 13046;13047 13047 2 9606 Homo sapiens 0.013400732440004504 FGTTVPFTSR Unmodified 1111.5662 0.56620887 603 B8ZZG1;A0A024RA25;Q9NZW5 MPP6 MAGUK p55 subfamily member 6 yes no 0 0 0 4 0 1 52.389 52.412 2 0.00034913 15092 20230619_1883_Aki_TMTPro18x_K_F4 112.11 86.935 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8547 603 8086 16258 13048 13048 1 9606 Homo sapiens 0.014888414719507637 FGTVLTEHVAAAELGAR Unmodified 1740.9159 0.91588303 3030 H0Y8X4;O43598;O43598-2 DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 yes no 0 0 0 7.5 0.5 1 1 56.659 56.716 3 1.8175999999999998E-59 16438 20230619_1888_Aki_TMTPro18x_K_F8 300.89 265.18 512120 408390 458570 465580 473920 567000 534660 530020 539190 528120 529350 580780 561990 495480 548180 589350 587980 626390 473060 374440 470630 466960 493060 564770 535770 543940 548770 535410 545490 584220 572040 518830 560110 592700 562460 594420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1020099999.9999999 8548 3030 8087 16259;16260 13049;13050 13050 2 9606 Homo sapiens 0.07506171900854497 FGVEAFSDCLR Unmodified 1299.5918 0.59177169 1448 H7C2W1;C9K0G7;E9PCG9;A0A384MTY4;Q02338 BDH1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial yes no 0 0 0 7 0 1 59.673 59.719 2 0.0039904 17671 20230619_1887_Aki_TMTPro18x_K_F7 89.609 84.458 34198 27699 29529 33044 31677 37578 36769 41401 47116 37571 46220 46581 46494 39078 44997 48318 54057 59100 31584 25405 30445 32998 32917 37734 37104 41913 47331 38458 47479 46650 47381 41061 46301 48994 51669 56000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41884000 8549 1448 8088 16261 13051 13051 1 9606 Homo sapiens -0.0460405206795258 FGVEQDR Unmodified 849.39808 0.39808091 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;Q76MU0 CTTN;EMS1 Src substrate cortactin yes no 0 0 0 2.5 0.5 1 1 38.864 38.924 2 0.015793 9142 20230619_1882_Aki_TMTPro18x_K_F3 110.81 72.016 98010 71817 84976 100540 100870 110870 102960 106600 136290 115180 127660 135070 134470 109750 115010 135890 147240 139240 90469 66008 87739 99270 103660 111210 104710 109430 136560 116590 131710 135360 136110 115440 119180 136260 140510 132250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 474740000 8550 1413 8089 16262;16263 13052 13052 1 9606 Homo sapiens -0.03264220721860056 FGVEQDVDMVFASFIR Unmodified 1858.8924 0.89237039 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;Q504U3;A0A024R609;H3BQ34;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 7 0 1 67.285 67.306 3 3.8826E-06 21041 20230619_1887_Aki_TMTPro18x_K_F7 114.29 100.03 6442.2 4144.7 4524.8 3530.5 4098.7 6055.8 3981.1 3932.5 4957.9 5544.6 4893.2 5711 7445.6 5690.1 6267.2 7646.5 6646.2 7215.4 5934.3 3794.7 4744 3653.4 4307.6 5883 4053.7 4205.1 5001 5524.7 5141.1 5789.9 7458.1 5976.2 6422.2 7624 6359.3 6855.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7106900 8551 370;3451 8090 16264 13053 13053 1 9606 Homo sapiens -0.0027200992801681423 FGVIFAGAQK Unmodified 1036.5706 0.57056597 183 A0A024R222;B4DHQ3;Q9Y617;A0A024R280;Q9Y617-2;B4DHX7 PSAT1 Phosphoserine aminotransferase yes no 0 0 0 5 0 1 60.633 60.683 3 0.00031955 18167 20230619_1885_Aki_TMTPro18x_K_F5 111.95 84.832 113580 107890 110900 80780 85215 113770 79088 80475 102360 40116 30763 31412 32974 30412 73856 42028 40079 38644 105110 98546 112290 84411 90599 111850 80872 83432 99945 42595 35126 32293 35554 32013 72341 41959 38664 36746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136830000 8552 183 8091 16265 13054 13054 1 9606 Homo sapiens 0.0537435068549712 FGVPVIADGGIQNVGHIAK Unmodified 1891.0316 0.031581485 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 0 0 2 0 1 59.665 59.677 3 1.1968000000000001E-24 18519 20230619_1881_Aki_TMTPro18x_K_F2 200.67 188.18 83662 71120 74127 84961 62935 79266 77650 70293 91525 92502 100740 97833 97599 88706 94638 111570 105070 126310 77306 65221 75999 84583 66770 80378 77882 73083 92813 92478 102780 98804 99615 93014 96966 112510 100580 119740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85100000 8553 1454 8092 16266 13055 13055 1 9606 Homo sapiens 0.12170695751706262 FGVQSER Unmodified 821.40317 0.40316629 1413 Q53HG7;A0A384MDY8;Q14247;Q76MU0 CTTN;EMS1 Src substrate cortactin yes no 0 0 0 3.5 0.5 1 1 37.077 37.126 2 0.017133 8353 20230619_1883_Aki_TMTPro18x_K_F4 109.01 39.014 166170 111080 141720 172480 183480 187010 178350 193350 242660 197100 220320 225920 216400 181230 198170 193060 250170 210440 153290 102260 146800 169220 187190 188100 182090 197150 242530 199930 226930 226460 220160 189060 204650 194840 238590 199830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168150000 8554 1413 8093 16267;16268 13056 13056 1 9606 Homo sapiens -0.014679168592351743 FGVQTDR Unmodified 821.40317 0.40316629 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;Q76MU0 CTTN;EMS1 Src substrate cortactin yes no 0 0 0 5 0 1 38.518 38.61 2 0.011243 8957 20230619_1885_Aki_TMTPro18x_K_F5 116.9 22.897 230800 153920 188940 222030 229620 235190 241240 236800 308630 279140 291020 307920 328660 258570 263340 274930 367590 313890 212850 141580 196220 218710 235660 236850 244580 242960 309880 280770 301100 309470 331100 269370 274700 278190 350330 297920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 256980000 8555 1413 8094 16269 13057 13057 1 9606 Homo sapiens -0.014679168592351743 FGVVLDEIKPSSAPELQAVR Unmodified 2154.1685 0.1684689 3188 Q53HJ6;M0QXB4;O14579;O14579-2;Q7Z4Z1;O14579-3;M0R061 COPE Coatomer subunit epsilon yes no 0 0 1 8 0 1 61.845 61.874 3 7.2554E-16 18567 20230619_1888_Aki_TMTPro18x_K_F8 149.44 135.57 225360 149840 186690 219800 187420 221530 211080 229570 264940 272920 275060 305350 299650 268360 227890 401890 324790 371330 207850 137850 193090 216150 195550 223960 213190 235110 267360 274460 282920 307420 301850 284960 239340 399430 310140 352840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1454700000 8556 3188 8095 16270 13058 13058 1 9606 Homo sapiens 0.1375514012079293 FGVVVVGVGR Unmodified 987.58655 0.58655038 1174 P53004;A0A140VJF4;C9J1E1 BLVRA Biliverdin reductase A yes no 0 0 0 5.5 1.12 1 1 1 1 55.618 55.67 2 0.0016335 16124 20230619_1885_Aki_TMTPro18x_K_F5 127.12 110.15 174280 146890 159450 184230 154860 197780 163440 160810 195690 186330 179800 193170 194420 168620 189200 197920 189070 233590 161070 134780 163300 183100 161750 198060 165330 167580 196940 187210 185980 194900 197740 176350 192540 200380 181210 221320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170750000 8557 1174 8096 16271;16272;16273;16274 13059 13059 1 9606 Homo sapiens 0.09226056922432235 FGWDCHGLPVEYEIDK Unmodified 1963.8774 0.87744861 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;J3KR24;A0A804HJ36;A0A804HIV9;A0A804HK69;A0A804HKU1;A0A804HIG2;A0A804HKW6 IARS;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 6 0.816 1 1 1 61.147 61.195 3 9.3502E-09 18640 20230619_1886_Aki_TMTPro18x_K_F6 141.55 124.87 525270 439810 545210 550010 392010 537900 516320 530650 511290 711430 649710 695910 720960 639780 679360 843500 751040 871880 485920 403530 550010 546320 423300 544470 513720 547460 527640 708430 663640 705260 731780 672570 696470 845390 718730 827370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 732690000 8558 1736 8097 16275;16276;16277 13060;13061 13061 2 9606 Homo sapiens -0.06593501795987322 FGYHIIMVEGR Oxidation (M) 1336.6598 0.65979168 4700 Q9Y237;Q9Y237-2 PIN4 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 yes no 0 1 0 1 0 1 48.622 48.622 3 0.02064 13752 20230619_1880_Aki_TMTPro18x_K_F1 56.087 34.58 58973 43709 47349 55975 61048 61993 56824 59923 70080 54404 46573 47467 54264 46631 45748 62765 56591 53527 54409 40133 49314 55588 62222 62192 57936 61202 69703 55102 49230 48499 54763 48974 47361 62246 54020 50950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46027000 8559 4700 8098 16278 13062 13062 2865 1 9606 Homo sapiens 0.0049281758274446474 FGYHIIMVEGR Unmodified 1320.6649 0.66487706 4700 Q9Y237;Q9Y237-2 PIN4 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 yes no 0 0 0 1.5 0.5 1 1 51.818 51.838 3 2.7195E-05 15245 20230619_1881_Aki_TMTPro18x_K_F2 138.25 110.92 72299 50998 62672 59781 58755 65867 68167 56403 81822 60819 62025 59823 64210 58600 69349 64071 64873 65738 66722 46794 64388 59749 61642 65938 68577 58437 81729 61268 64673 60746 65739 60766 70152 64416 62119 62418 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142940000 8560 4700 8098 16279;16280 13063;13064 13064 2 9606 Homo sapiens 0.017371214453532957 FGYSVNR Unmodified 841.40825 0.40825167 4722 Q9Y3C1;D6RIC3;A0A0C4DGU5;Q9Y3C1-3;Q9Y3C1-2;B4E098;D6RC60;A0A087WU10 NOP16 Nucleolar protein 16 yes no 0 0 0 2 0 1 41.946 42.026 2 0.028096 10744 20230619_1881_Aki_TMTPro18x_K_F2 85.357 45.595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8561 4722 8099 16281 13065 13065 1 9606 Homo sapiens -0.018796129966176522 FGYVDFESAEDLEK Unmodified 1647.7304 0.73043325 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;B3KM80;Q6ZS99;A0A7I2V2S8 NCL Nucleolin yes no 0 0 0 3.17 1.34 1 1 1 2 1 62.549 62.565 2;3 2.4828E-28 19483 20230619_1882_Aki_TMTPro18x_K_F3 302.33 266.92 679070 520950 570850 711600 575890 701620 670300 739040 816760 815220 800070 889930 988910 812310 750500 1017700 896210 1038500 626840 478590 589910 702580 601310 710790 675080 754380 823460 822040 830300 897450 991880 851490 776920 1019700 857070 985640 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 4112899999.9999995 8562 1658 8100 16282;16283;16284;16285;16286;16287 13066;13067;13068;13069;13070 13068 5 9606 Homo sapiens -0.06752275409257891 FGYYGDALQQDCRK Unmodified 1719.7675 0.76750423 3015 G3XAI2;P07942;A0A7I2V5X5;A0A7I2V3I5;A0A7I2V2T9;A0A7I2V3J7;A0A7I2V682;A0A7I2V407;A0A7I2V2J0;A0A7I2V5R0;Q8TAS6 LAMB1 Laminin subunit beta-1 yes no 0 0 1 8 0 1 49.77 49.843 3 0.00034305 13462 20230619_1888_Aki_TMTPro18x_K_F8 92.939 80.447 40389 41277 37658 35164 38286 40556 41099 47640 42320 46549 37813 29869 44824 34856 39623 52956 40084 39984 37383 37724 38473 36145 39781 40803 41338 48105 42919 46579 39266 31307 45258 36761 40483 52157 38347 38115 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23840000 8563 3015 8101 16288 13071 13071 1 9606 Homo sapiens -0.06358882344534322 FHADFIHK Unmodified 1013.5083 0.50830006 70 A0A024QZY0;Q86WA6-2;Q86WA6;H7C0M3 BPHL Valacyclovir hydrolase yes no 0 0 0 4.5 3.5 1 1 44.526 44.536 4 0.0010283 11277 20230619_1888_Aki_TMTPro18x_K_F8 117.04 82.228 210150 47590 115830 178490 233750 71095 219120 251370 284220 202560 261030 253220 279670 243420 119230 291900 137010 287220 192720 44986 127450 167940 231920 84396 223670 243000 284640 208830 269370 254710 277200 253900 126090 291760 131960 272300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 125860000 8564 70 8102 16289;16290 13072;13073 13073 2 9606 Homo sapiens 0.002086243371877572 FHALGPIYYR Unmodified 1235.6451 0.64512789 658 Q9UL25;A0A024RBA9;Q96GX3 RAB21 Ras-related protein Rab-21 yes no 0 0 0 5 0 1 49.142 49.219 3 6.6891E-08 13416 20230619_1885_Aki_TMTPro18x_K_F5 164.57 123.54 49359 23191 34224 47110 60900 47087 63937 52364 76120 37046 18630 22864 24708 25153 47456 34782 29760 19784 45404 21475 36494 45556 61115 47745 64548 52753 74492 37911 22176 23928 26154 26349 46805 34007 28576 18987 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 287980000 8565 658 8103 16291 13074 13074 1 9606 Homo sapiens 0.03673113496870428 FHCPHCDTVIAR Unmodified 1511.6762 0.6761868 1351 A0A2R8Y595;A0A2R8YFL0;P49711-2;P49711 CTCF Transcriptional repressor CTCF yes no 0 0 0 6.5 0.5 1 1 34.798 34.863 4 9.9665E-10 7216 20230619_1887_Aki_TMTPro18x_K_F7 154.66 140.99 23914 10765 22754 22146 27901 27397 26992 27652 35538 26877 27788 20306 30703 23902 22832 23453 29089 28062 22041 9973.2 23281 21484 28538 27298 27527 28197 35393 27030 28940 21058 30861 24542 23702 23833 27765 26608 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111950000 8566 1351 8104 16292;16293 13075 13075 1 9606 Homo sapiens -0.05918424522837995 FHDFDHR Unmodified 972.42021 0.42021334 2020;3876 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959;K7EII0;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 0 3.5 0.5 1 1 32.925 32.99 3 0.012313 6770 20230619_1882_Aki_TMTPro18x_K_F3 82.716 54.204 106810 32611 83590 99063 139100 76540 103120 136380 144010 138300 182530 194230 188530 168110 123570 133380 153250 187220 98200 30548 87661 94212 138650 80550 107410 135160 145920 141300 185680 193650 189160 172450 128490 137610 146580 177130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75637000 8567 2020;3876 8105 16294;16295 13076 13076 1 9606 Homo sapiens -0.06709996253437112 FHDIDDVKK Unmodified 1115.5611 0.56112349 4504;1998 A8K0P2;Q9H2U2-6;Q9H2U2-3;Q9H2U2;Q9H2U2-2;H0Y9D8;B4DR66;D6R967 PPA2 Inorganic pyrophosphatase 2, mitochondrial no no 0 0 1 5.5 0.5 1 1 43.185 43.272 4 0.00031904 10895 20230619_1886_Aki_TMTPro18x_K_F6 122.26 84.782 133620 45776 107830 128390 175490 117720 168800 154800 215120 150330 202680 186970 198190 154870 147470 175100 167600 175540 122910 42754 112760 122600 176260 120740 171880 155520 215750 153370 208140 187170 199900 161910 152120 175600 160210 166700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116420000 8568 1998;4504 8106 16296;16297 13077 13077 1 9606 Homo sapiens 0.007965376093125087 FHEAQLSEK Unmodified 1087.5298 0.52982336 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 4.5 0.5 1 1 40.246 40.312 3 0.001673 9660 20230619_1885_Aki_TMTPro18x_K_F5 92.538 71.143 134140 86266 121960 145580 145420 155510 147950 147920 188850 157870 183450 188560 187450 152280 147850 204780 236380 210340 123770 79520 125400 142160 149320 156250 150270 151930 189750 160010 188620 188870 189360 161070 156230 205060 225130 199820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 198430000 8569 81 8107 16298;16299 13078;13079 13079 2 9606 Homo sapiens -0.0104403542475211 FHEICSNLVK Unmodified 1245.6176 0.61759251 3065 H3BN98;H3BPJ2;B7Z6R9;A0A024QYV7;Q15041-2;Q15041;A8K522 ARL6IP1;hCG_1994130 ADP-ribosylation factor-like protein 6-interacting protein 1 yes no 0 0 0 4.5 3.5 1 1 47.718 47.718 3 1.2724E-07 12574 20230619_1888_Aki_TMTPro18x_K_F8 152.97 120.64 108610 95009 101520 120540 84972 104200 114060 93204 125280 145720 181940 242570 175500 116210 190020 185290 200540 217480 100420 87172 103600 119380 90447 106350 113680 97560 129250 147260 184180 237330 179770 127790 193530 186880 191890 206160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 365810000 8570 3065 8108 16300;16301 13080;13081 13081 2 9606 Homo sapiens 0.004608421743114377 FHFFEDQLR Unmodified 1237.588 0.58800695 4015 Q56VL3 OCIAD2 OCIA domain-containing protein 2 yes yes 0 0 0 7.5 0.5 1 1 54.151 54.218 3 1.2119E-13 15428 20230619_1887_Aki_TMTPro18x_K_F7 241.96 211.34 57205 27952 55854 42610 59152 50900 64102 64887 70858 63375 59206 48532 77105 56686 47630 88904 55174 57363 52753 25771 56807 41973 61201 51177 64556 65239 71357 63690 61972 50340 76671 59913 49602 86932 52732 54810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107330000 8571 4015 8109 16302;16303 13082 13082 1 9606 Homo sapiens -0.021283537794943186 FHFVDLAGSER Unmodified 1276.62 0.62003536 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9;H0YIM7;O75037-3;O75037-2;O75037-4;O75037;Q2UVF0;B4DMY5;Q86VH2;Q86VH2-2;Q86VH2-3 KIF21A;KIF21B;KIF27 Kinesin-like protein KIF21A;Kinesin-like protein;Kinesin-like protein KIF21B;Kinesin-like protein KIF27 no no 0 0 0 6.5 0.5 1 1 50.925 51.003 3 0.00029598 14354 20230619_1886_Aki_TMTPro18x_K_F6 82.278 77.179 597710 650490 466660 469070 440180 466600 492910 512190 827380 652580 625250 500770 655450 638280 639790 683430 574620 514540 552830 593760 484490 489570 461600 473980 504160 523670 815430 648090 651430 520430 667780 655780 647490 676670 550000 490720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 247230000 8572 4170 8110 16304;16305 13083 13083 1 9606 Homo sapiens -0.007209860963257597 FHGDQECYYQDDLR Unmodified 1844.7424 0.74241169 3935 Q15542-2;Q15542 TAF5 Transcription initiation factor TFIID subunit 5 yes no 0 0 0 2 0 1 43.433 43.514 3 6.2029E-05 11452 20230619_1881_Aki_TMTPro18x_K_F2 108.38 108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8573 3935 8111 16306 13084 13084 1 9606 Homo sapiens -0.14616981937751916 FHHTFSTEIAK Unmodified 1316.6513 0.65133548 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 8 0 1 41.2 41.194 4 0.00029098 9997 20230619_1888_Aki_TMTPro18x_K_F8 111.65 87.665 29369 12188 20819 24521 32131 21029 26380 42077 36897 25982 31166 32574 30887 27887 21226 32294 22844 38347 27008 11294 22031 23706 32253 22020 27284 41047 36733 27305 32224 32632 31083 29152 21912 32684 21949 36301 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12733000 8574 909 8112 16307 13085 13085 1 9606 Homo sapiens 0.005675869377455456 FHLCSVPTR Unmodified 1115.5546 0.55459833 1042 O94973-2;O94973;B7Z5S9;A0A0G2JS82;B7Z1Q4;O94973-3;A0A8I5KPP9;A0A0G2JQM1 AP2A2 AP-2 complex subunit alpha-2 yes no 0 0 0 3 0 1 41.573 41.635 3 1.4193E-05 10307 20230619_1882_Aki_TMTPro18x_K_F3 136.99 120.05 41348 24608 40861 45601 42321 37142 42794 42216 45918 57979 55583 50840 56175 48137 46010 59218 50483 60459 38164 22722 41584 44186 43779 38317 43238 43209 47054 57508 56556 51854 56827 50342 47291 59359 48327 57375 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42700000 8575 1042 8113 16308 13086 13086 1 9606 Homo sapiens 0.0014432117695832858 FHLGLFTDR Unmodified 1104.5716 0.5716286 2710 Q8TEQ6;B7ZLC9 GEMIN5 Gem-associated protein 5 yes no 0 0 0 2.5 0.5 1 1 54.342 54.377 3 1.9681E-05 16346 20230619_1881_Aki_TMTPro18x_K_F2 160.56 137.87 47662 25132 43966 47291 43980 40114 44782 49506 55000 51146 50061 48243 63808 50826 45605 63639 46143 57304 43946 23228 44974 45821 45660 41312 45445 49965 55275 51518 52165 49234 63792 53033 46830 63338 44221 54453 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38629000 8576 2710 8114 16309;16310 13087;13088 13087 2 9606 Homo sapiens 0.023525650544115706 FHLISPLIQK Unmodified 1194.7125 0.71247918 3269 O43847;O43847-2;Q96L67;B4DRI0;Q6UUU9;G3V1R5;H0Y5G9;B4DYV0 NRD1 Nardilysin yes no 0 0 0 6 0 1 57.211 57.283 3 2.9819E-05 16983 20230619_1886_Aki_TMTPro18x_K_F6 129.85 33.622 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8577 3269 8115 16311 13089 13089 1 9606 Homo sapiens 0.12291143707830088 FHLLELEK Unmodified 1027.5702 0.57023162 576 Q9HCQ4;O14770-2;U3KQ95;B2RC57;B3KPD8;A0A8V8TPB7;U3KPR8;B7Z6F6;H0YNY8;H0YKE5;A0A024R9I7;B7Z272;F5GYS8;B7Z4B3;A0A8V8TQU6;A0A8V8TPM6;A0A024R9J1;H0YKN2;E9PDC4;H0YMX5;B7Z4T5;O14770;O00470-2;O14770-5;O14770-6;U3KQI2;Q53RD5;O14770-7;O14770-8;O00470;O14770-3;B3KUX4;B3KP81;O14770-4;A0A024R9L4;H3BLU4;Q8TCW1;A6NDR6;Q99687-2;Q99687-3;U3KQV2;H0YNA8;A0A024R0W2;Q99687;A8K0S8;A0A024R0S2 meis1;MEIS2;MEIS1;MEIS3;MEIS3P1;MEIS3P2 Homeobox protein Meis2;Homeobox protein Meis1;Putative homeobox protein Meis3-like 1;Homeobox protein Meis3;Putative homeobox protein Meis3-like 2 yes no 0 0 0 7.5 0.5 1 1 55.363 55.424 3 0.00073313 15934 20230619_1887_Aki_TMTPro18x_K_F7 124.23 90.27 104620 33488 80632 87361 79246 67909 86111 83371 104810 107190 119090 114870 119830 105090 91100 144460 104510 142550 96184 31248 83888 83462 82542 70463 87028 84780 106290 107270 121470 116030 120930 110790 94201 144260 100120 135280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 523120000 8578 576 8116 16312;16313 13090 13090 1 9606 Homo sapiens 0.057549309656678815 FHMVDGNVSGEFTDLVPEK Oxidation (M) 2135.9834 0.98337024 3356 O95433;O95433-2;G3V438;H0YJ63 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 1 0 5.5 0.5 1 1 57.604 57.668 3 0.0011434 16932 20230619_1885_Aki_TMTPro18x_K_F5 70.802 61.272 25393 10630 24973 28308 25203 23769 24934 26576 27621 30118 34020 28941 35068 31734 27775 40699 29110 38254 23405 9900.9 25418 27042 26123 24423 25259 27055 28254 30211 34606 29574 35418 33107 28522 40577 27903 36326 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219750000 8579 3356 8117 16314;16315 13091 13091 1963 1 9606 Homo sapiens -0.039182107411761535 FHMVDGNVSGEFTDLVPEK Unmodified 2119.9885 0.98845562 3356 O95433;O95433-2;G3V438;H0YJ63 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 5 0 1 61.175 61.226 3 0.049786 18435 20230619_1885_Aki_TMTPro18x_K_F5 58.159 49.971 32638 14914 16045 37200 28591 20392 34034 22907 31038 25271 28135 26104 32701 28218 27302 36528 30505 32889 29969 13865 17988 35440 28789 21950 33853 23363 31657 25458 29193 26569 32981 29471 28086 36342 29172 31268 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68393000 8580 3356 8117 16316 13092 13092 1 9606 Homo sapiens -0.0267390687859006 FHMYEGYPLWK Oxidation (M) 1485.6751 0.67510739 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;A0A8V8TL37;G3V393 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 1 0 2 0 1 55.068 55.089 3 0.00022557 16632 20230619_1881_Aki_TMTPro18x_K_F2 103.22 90.453 87736 39273 83412 104190 95221 94750 88520 82888 105440 140280 129920 131640 144310 130920 98881 175950 135740 142110 80865 36560 85372 99593 97744 96182 90190 87079 107640 138410 132720 134040 144740 137370 103820 173970 129570 135310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127220000 8581 3373 8118 16317 13093 13093 1971 1 9606 Homo sapiens -0.048303156200745434 FHMYEGYPLWK Unmodified 1469.6802 0.68019277 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;A0A8V8TL37;G3V393 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 0 0 2.5 0.5 1 1 59.463 59.484 3 0.00037255 18202 20230619_1882_Aki_TMTPro18x_K_F3 96.957 81.755 160320 102140 139580 160990 127010 148610 146380 149350 166120 197080 178730 196810 217640 184830 167290 239190 213790 242160 147880 94076 143450 157490 133580 151150 147140 153830 168850 196570 184570 199390 218540 193950 173970 239430 204300 229870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 145070000 8582 3373 8118 16318;16319 13094 13094 1 9606 Homo sapiens -0.035860117574657124 FHNELNAHIK Unmodified 1221.6255 0.62545508 3440 P12270;P12270-2;Q58F23;Q504U6;A0PJC9 TPR Nucleoprotein TPR yes no 0 0 0 7.5 0.5 1 1 39.913 39.94 4 1.244E-07 9474 20230619_1888_Aki_TMTPro18x_K_F8 167.12 144.24 226720 26284 135670 216340 222780 120540 196580 228610 284720 260560 297020 315620 326130 242270 125360 348560 179260 266850 207820 26037 147020 201190 223210 131580 202430 226960 285540 263180 305170 315520 322110 257900 135280 343320 171600 254000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284820000 8583 3440 8119 16320;16321 13095 13095 1 9606 Homo sapiens 0.02350737486131038 FHNWFDDR Unmodified 1135.4835 0.48354187 247 A0A024R3J7;P46977;A0A0C4DH80;E9PN73;E9PI32 hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 0 0 6 0.816 1 1 1 49.638 49.717 3 3.6348E-05 13777 20230619_1886_Aki_TMTPro18x_K_F6 164.57 143.19 188280 70993 133760 175130 189390 146430 185590 194770 252380 203190 198050 204740 229820 183150 177400 247920 184030 232460 173100 66075 141430 167740 191970 151330 189320 195860 251110 205000 207120 207120 230990 193100 182100 247010 176350 220780 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 298390000 8584 247 8120 16322;16323;16324 13096;13097;13098 13097 3 9606 Homo sapiens -0.07878055536207285 FHPEPYGLEDDQR Unmodified 1601.711 0.71103521 1594 O60716;H0YC95;O60716-3;O60716-2;Q68DU0;C9JZR2;A0A669KB05;O60716-5;O60716-11;O60716-10;O60716-9;O60716-17;Q96FS1;O60716-21;O60716-19;O60716-13;O60716-18;O60716-6;O60716-8;O60716-4;O60716-7;A0A669KB62;O60716-20;O60716-22;O60716-23;O60716-16;O60716-24;O60716-12;O60716-15;O60716-14 CTNND1;DKFZp781O2021 Catenin delta-1 yes no 0 0 0 2.5 1.12 1 1 1 1 44.379 44.429 3 0.0017538 11889 20230619_1881_Aki_TMTPro18x_K_F2 58.268 53.467 285050 212410 323520 266120 341540 378390 350880 345720 459270 307600 361220 370640 387850 301730 359170 376920 418600 341760 263730 194980 325380 265930 353650 373310 356560 354350 457310 315140 376440 371210 393560 317500 369070 375580 399410 325260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225940000 8585 1594 8121 16325;16326;16327;16328 13099 13099 1 9606 Homo sapiens -0.06575186909549302 FHPIQGHR Unmodified 990.51478 0.51478242 3836 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 2 0.816 1 1 1 28.201 28.238 3 2.6795E-05 5353 20230619_1880_Aki_TMTPro18x_K_F1 158.36 137.49 87421 73925 80539 82577 117690 140360 101860 106730 114440 37452 48442 47604 36168 29726 87147 37363 69833 40129 80800 67751 82973 83431 118990 136740 103970 109460 113000 42016 52377 47321 39750 31654 86473 37741 66778 38194 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148380000 8586 3836 8122 16329;16330;16331 13100;13101;13102 13100 3 9606 Homo sapiens 0.019145622885730518 FHQFLVSETESGNISR Unmodified 1849.8959 0.89587586 3813 Q08J23-2;Q08J23;A0A140T9Y7 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 0 0 0 6.5 0.5 1 1 50.028 50.107 3 2.0604E-14 13631 20230619_1887_Aki_TMTPro18x_K_F7 172.82 144.97 87020 57967 81588 77226 83174 97484 103260 88570 102490 109620 91038 92069 127570 93335 95321 122500 107990 114690 80330 53271 83352 76676 86834 96808 102890 91668 104120 109130 95543 94322 127410 97862 98345 122110 103250 109000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154420000 8587 3813 8123 16332;16333 13103 13103 1 9606 Homo sapiens 0.004923761702229967 FHQLDIDDLQSIR Unmodified 1598.8053 0.80526994 1468;3317 V9HW40;Q53F60;O75828;A0A384NL53;P16152;E9PQ63;A8MTM1;P16152-2 HEL-S-25;CBR3;CBR1 Carbonyl reductase [NADPH] 3;Carbonyl reductase [NADPH] 1 no no 0 0 0 5 0.816 1 1 1 55.646 55.696 3 2.976E-69 16144 20230619_1885_Aki_TMTPro18x_K_F5 281.32 251.64 469080 192980 384370 483720 464320 428810 488410 507910 592680 578980 590640 587970 643770 551940 484070 677500 515020 622520 431750 179540 399210 463310 476290 439280 494250 515330 597940 581580 608190 595450 647740 577070 497890 675180 493220 591460 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 762910000 8588 3317;1468 8124 16334;16335;16336 13104;13105;13106 13105 3 9606 Homo sapiens 0.02981951912624936 FHSEDYIDFLQR Unmodified 1568.726 0.72595699 3243 O15379;O15379-2 HDAC3 Histone deacetylase 3 yes no 0 0 0 5 0 1 57.083 57.142 3 1.0184E-05 16737 20230619_1885_Aki_TMTPro18x_K_F5 135.1 108.97 25727 21310 25682 24822 31623 31655 34066 35051 39985 24995 28021 28410 29721 24348 32770 33025 29087 34177 23791 19539 26178 24883 32420 31575 34376 35293 39873 25924 29402 28575 30420 25713 33069 33110 27901 32430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24597000 8589 3243 8125 16337 13107 13107 1 9606 Homo sapiens -0.035656950415386746 FHSQLMR Oxidation (M) 933.44907 0.44907062 3608 P49458;Q8WVW9 SRP9 Signal recognition particle 9 kDa protein yes no 0 1 0 4.8 2.79 1 1 1 1 1 31.728 31.767 3 0.037614 6413 20230619_1881_Aki_TMTPro18x_K_F2 60.709 36.373 252870 99031 238950 242960 410900 355430 317200 357650 419510 67993 135650 132600 87793 102570 185420 69681 134790 111860 232950 92132 246380 234760 410110 350780 328200 357310 409060 86795 150600 130910 96057 104930 183380 73312 129300 105880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 249490000 8590 3608 8126 16338;16339;16340;16341;16342 13108;13109 13108 2291 2 9606 Homo sapiens -0.020315949486302998 FHSQLMR Unmodified 917.45416 0.454156 3608 P49458;Q8WVW9 SRP9 Signal recognition particle 9 kDa protein yes no 0 0 0 2.5 0.5 1 1 36.29 36.346 3 0.0010187 8210 20230619_1881_Aki_TMTPro18x_K_F2 143.02 104.78 324310 147760 263070 272200 415580 452540 399020 372140 569740 73661 65765 60054 68954 56726 164850 55037 77225 49339 298580 136640 274730 266760 419560 441740 407880 377710 549060 91094 91492 61722 75008 58550 160480 55387 74542 47025 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 303010000 8591 3608 8126 16343;16344 13110;13111 13110 2 9606 Homo sapiens -0.007872910860214688 FHTEALTALLSDDSK Unmodified 1646.8152 0.81516593 2699 B7Z7P8;P62495-2;P62495;I3L492;D6RJE8 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 6.33 0.471 2 1 60.507 60.557 3 4.5129E-08 18050 20230619_1887_Aki_TMTPro18x_K_F7 138.77 123.61 41459 20243 37151 41219 32786 30462 42489 37927 44175 38911 39628 43064 48124 42001 34233 48597 39627 50085 38206 18741 38051 39734 34618 31774 42324 38292 44717 39405 41256 43500 48197 43705 35436 48770 37935 47517 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238650000 8592 2699 8127 16345;16346;16347 13112;13113 13113 2 9606 Homo sapiens 0.01763095127307679 FHTITTSYYR Unmodified 1287.6248 0.62478638 3687 P61026;Q53T70 RAB10 Ras-related protein Rab-10 yes no 0 0 0 4 0 1 42.753 42.797 3 4.8386E-10 10735 20230619_1883_Aki_TMTPro18x_K_F4 178.95 125.2 107200 54861 88069 87828 122460 118670 107080 100410 149900 30282 30645 30620 34469 28173 48925 33338 46815 32203 98750 50597 91546 86343 124070 117210 110060 101990 145170 34630 37256 31058 35806 29420 49284 33408 44712 30653 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120160000 8593 3687 8128 16348 13114 13114 1 9606 Homo sapiens -0.007521019535943196 FHTVSGSK Unmodified 861.43447 0.43446642 4406 Q99729-3;D6R9P3;D6RD18;B4DMY3;D6RBZ0;Q53F64;Q99729-2;Q99729-4;Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 2 0 1 35.353 35.41 3 5.4436E-06 7830 20230619_1881_Aki_TMTPro18x_K_F2 191.78 145.39 145880 35573 174070 188280 214490 190270 175680 230250 205830 121820 217290 273010 200850 181720 146510 90530 257650 312030 134520 34005 175090 177330 218150 192920 180530 229510 208050 133500 221960 266890 203090 185840 155750 105000 245820 293820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165480000 8594 4406 8129 16349 13115 13115 1 9606 Homo sapiens -0.0017934382514113167 FHVEEEGK Unmodified 973.45051 0.45051041 3374;1199 V9HWF4;P00558;P00558-2;B4E1H9;P07205;A0A140VJR3;V9HW85 HEL-S-68p;PGK1;PGK2;HEL-S-272 Phosphoglycerate kinase;Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 no no 0 0 0 2.5 1.12 1 1 1 1 39.549 39.59 3 4.8613E-05 9406 20230619_1882_Aki_TMTPro18x_K_F3 170.3 87.547 1139800 292600 892060 1043300 1304300 895010 1110300 1135600 1412200 1211000 1534700 1479100 1529000 1316100 1076400 1349600 1424100 1381000 1047500 275760 933140 988550 1313700 921770 1140000 1145700 1425700 1228200 1567400 1484200 1539300 1364400 1123200 1356900 1359000 1311500 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 7530999999.999999 8595 3374;1199 8130 16350;16351;16352;16353 13116;13117;13118;13119 13118 4 9606 Homo sapiens -0.03727682378894315 FIAGTGCLVR Unmodified 1092.575 0.57499942 1964 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 0 0 0 3.5 0.5 1 1 51.336 51.385 2 9.8825E-06 14612 20230619_1883_Aki_TMTPro18x_K_F4 165.72 129.52 141570 125860 131560 132410 107620 138410 144620 137790 155830 169040 171140 159070 183290 142120 167600 192790 186550 181930 130900 115270 134150 133340 114840 139510 144050 141660 158790 168840 175330 161450 185850 149910 171880 192240 178280 172930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182100000 8596 1964 8131 16354;16355 13120 13120 1 9606 Homo sapiens 0.032414918367749124 FIAHVPVPSQQEIEEALVR Unmodified 2161.1532 0.15315318 4684 Q9ULR0;Q9ULR0-2;Q9ULR0-1 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes no 0 0 0 7.5 0.5 1 1 62.081 62.113 3 8.5667E-05 18652 20230619_1888_Aki_TMTPro18x_K_F8 83.404 71.259 80973 60002 79385 72602 66867 73486 84169 73413 95169 85823 82157 87924 86964 86684 92270 101670 81645 90954 74817 55061 80547 72333 70915 74255 84193 75375 95799 86173 85187 89123 88936 90173 93206 101320 78284 86468 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 482870000 8597 4684 8132 16356;16357 13121;13122 13121 2 9606 Homo sapiens 0.11902273323585177 FIASTGMDR Unmodified 996.46987 0.46986564 4685 Q9UMS4;H0YGZ5 PRPF19 Pre-mRNA-processing factor 19 yes no 0 0 0 6.5 0.5 1 1 46.059 46.146 2 3.1182E-05 12193 20230619_1886_Aki_TMTPro18x_K_F6 166.82 115.49 414590 318520 374300 391090 404730 431110 448410 421130 498260 467270 469320 437440 493540 404250 446410 499560 535420 495900 382910 292290 384140 389570 419140 432740 451060 432200 503650 468950 483740 444480 500700 423250 459950 500130 511150 471190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 314190000 8598 4685 8133 16358;16359 13123;13124 13123 2 9606 Homo sapiens -0.028510493596286324 FICIYPAYLNNK Unmodified 1514.7592 0.75917137 860 A0A087WYR0;P09132;D6RBG4;A0A2R8Y4M3;A0A2U3TZN1;A0A087WWU9;P09132-2 SRP19 Signal recognition particle 19 kDa protein yes no 0 0 0 5 0 1 62.697 62.743 3 0.084946 19191 20230619_1885_Aki_TMTPro18x_K_F5 37.681 19.369 64209 84360 88852 73779 114160 97093 119670 126110 106400 87767 82553 83374 88182 64939 130290 89428 89933 95187 59786 77062 88491 75837 116350 97203 119920 125720 108190 90575 86203 84251 91726 68956 129300 89920 86473 90329 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64329000 8599 860 8134 16360 13125 13125 1 9606 Homo sapiens 0.022382154768138207 FICTTSAIQNR Unmodified 1309.6449 0.6448699 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;K7ESG8 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 2.5 0.5 1 1 47.232 47.312 2 6.758099999999999E-23 12885 20230619_1882_Aki_TMTPro18x_K_F3 251.75 208.04 338830 308280 307150 271740 259880 300610 290040 279660 342500 186200 183490 117020 148430 105180 251000 144480 121640 87038 313280 281930 313700 278200 274760 301520 292330 284680 339080 191390 193980 121810 157260 111040 245690 141720 117400 83405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 623810000 8600 161 8135 16361;16362 13126;13127 13127 2 9606 Homo sapiens 0.0024332571472314157 FICVTPTTCSNTIDLPMSPR Oxidation (M) 2325.0803 0.08032387 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2YQI1;B7ZA24;P40763-2;A0A7I2V552;B5BTZ6;Q9BXH2 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 1 0 2 0 1 60.198 60.209 3 0.056465 18700 20230619_1881_Aki_TMTPro18x_K_F2 42.529 40.853 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8601 1660 8136 16363 13128 13128 1077 1 9606 Homo sapiens -0.029213078480552213 FIDAVYK Unmodified 854.4538 0.45380487 4484 Q9C0F1;Q9C0F1-2;D6RGX6;D6RBX1;D6RC25 CEP44 Centrosomal protein of 44 kDa yes no 0 0 0 8 0 1 56.2 56.257 2 0.078316 16253 20230619_1888_Aki_TMTPro18x_K_F8 69.998 18.211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8602 4484 8137 16364 13129 13129 1 9606 Homo sapiens 0.02075612465762333 FIDFFKR Unmodified 971.52289 0.52288749 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62;A0A6Q8PGI8;A0A6Q8PHN5 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 1 5.5 0.5 1 1 59.541 59.599 3 0.018271 17727 20230619_1885_Aki_TMTPro18x_K_F5 94.262 67.878 236090 294230 236620 186100 205780 114730 206980 213340 156150 117990 115270 65883 71091 57932 189170 80517 74649 33976 219030 268280 239370 196600 215160 124440 207240 208620 160230 122650 118210 69196 79451 61197 183350 78322 72249 32913 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37120000 8603 1637 8138 16365;16366 13130;13131 13130 2 9606 Homo sapiens 0.0359869648533504 FIDPFCK Unmodified 925.43677 0.4367746 3896 Q14684;Q14684-2;Q6PJM8 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 0 4.5 3.5 1 1 61.459 61.459 2 0.030812 19059 20230619_1880_Aki_TMTPro18x_K_F1 94.887 34.736 175840 161520 173080 190660 139830 166280 177490 172060 163660 198290 170820 164630 225430 169910 161530 243980 197850 218340 162700 148070 175660 189870 148910 170150 176430 176140 168050 197900 177240 168980 225180 179120 167850 242280 189090 207580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156610000 8604 3896 8139 16367;16368 13132;13133 13132 2 9606 Homo sapiens -0.02892631411691582 FIDPFCR Unmodified 953.44292 0.44292261 3663 Q6PJJ2;P56182;Q96J73;B4DZM3 RRP1 Ribosomal RNA processing protein 1 homolog A yes no 0 0 0 8 0 1 58.64 58.687 2 0.02183 17252 20230619_1888_Aki_TMTPro18x_K_F8 108.24 63.627 92695 85044 85367 86689 80679 96163 94890 92592 100970 92577 80344 80641 105400 82266 86932 107550 99872 94067 85722 77858 87277 87593 84622 96466 95041 94838 101730 93227 84507 82504 105870 86173 89546 106860 95391 89510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127670000 8605 3663 8140 16369 13134 13134 1 9606 Homo sapiens -0.03566113180170305 FIDPLAK Unmodified 802.45889 0.45889025 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;A0A3B3IS57;A0A3B3ITP6;A0A8V8TKP2 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 8 0 1 58.832 58.873 2 0.052122 17328 20230619_1888_Aki_TMTPro18x_K_F8 85.265 26.06 176590 147990 150040 171030 114140 186270 144120 157040 235470 224900 205780 289470 337530 285720 152710 415050 353960 515990 163110 135680 154270 171020 122940 186420 146450 164280 233680 225760 218590 290870 331770 301850 171150 419690 337840 488420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 430390000 8606 471 8141 16370 13135 13135 1 9606 Homo sapiens 0.049759163283852104 FIDTSQFILNR Unmodified 1352.7089 0.70885036 3271 O60220 TIMM8A Mitochondrial import inner membrane translocase subunit Tim8 A yes yes 0 0 0 3 0 1 62.194 62.224 3 6.6444E-05 19354 20230619_1882_Aki_TMTPro18x_K_F3 126.19 95.465 25261 19977 26694 25308 23938 33157 27750 29721 37841 29700 27443 29689 31963 28011 25426 34445 33256 28332 23365 18336 26956 25226 25251 32832 28074 30587 37549 30039 28851 30085 32188 29276 26449 34146 31709 26992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86061000 8607 3271 8142 16371 13136 13136 1 9606 Homo sapiens 0.04660429143336842 FIDTTSK Unmodified 810.41233 0.41233399 3567;2399 B3KS36;P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;Q49AJ9;B2R7Y3;Q92901 RPL3;rpl3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like no no 0 0 0 6.5 1.12 1 1 1 1 47.336 47.412 2 0.0023577 12771 20230619_1886_Aki_TMTPro18x_K_F6 162.31 112.28 1923500 1166400 2099900 2196200 2544500 2670500 2443600 2429700 2621700 2373200 2714100 2711400 2978900 2484600 2425200 1693800 3247000 2835500 1777100 1077200 2125600 2137600 2603300 2657400 2475500 2497300 2664300 2412400 2791500 2727400 3005700 2530700 2516600 1781500 3095900 2682600 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1786699999.9999998 8608 2399;3567 8143 16372;16373;16374;16375 13137;13138;13139;13140;13141;13142 13139 6 9606 Homo sapiens -0.0004556829355806258 FIDVGGYK Unmodified 897.45962 0.45961853 3960 Q96QC0;Q2L6I0;Q58F28 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes no 0 0 0 1 0 1 56 56 2 0.021556 16836 20230619_1880_Aki_TMTPro18x_K_F1 82.241 45.794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8609 3960 8144 16376 13143 13143 1 9606 Homo sapiens 0.006787109774336386 FIEDELQIPVK Unmodified 1329.718 0.71801807 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 0 0 4.5 0.5 1 1 62.509 62.535 3 0.0015025 19068 20230619_1885_Aki_TMTPro18x_K_F5 85.958 48.277 86324 68879 66818 94363 69884 106810 85052 86814 80030 123120 78165 103690 134070 64444 114200 133990 103480 116670 79660 63271 69752 93281 73012 106510 84728 91030 82068 121780 82936 104720 133760 71673 115990 132470 99205 110950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 891500000 8610 351 8145 16377;16378 13144 13144 1 9606 Homo sapiens 0.06634777708995898 FIEEHATK Unmodified 973.4869 0.48689592 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 4 0 1 40.572 40.615 3 0.0056804 9821 20230619_1883_Aki_TMTPro18x_K_F4 78.816 45.39 826370 385110 583290 696670 834030 703560 678190 747290 1026900 931690 1126800 1179900 1038700 919690 674690 1186500 1012900 1259600 760210 355990 616800 677520 841940 712070 703750 765280 1030000 939340 1147000 1177900 1046000 971110 714130 1190500 967610 1194700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 789900000 8611 909 8146 16379 13145 13145 1 9606 Homo sapiens -0.0009080548218207696 FIEFEDSQEQEK Unmodified 1527.6729 0.67291837 3273 O60271;O60271-4;O60271-2;O60271-3;O60271-5;A0A060L980 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 0 3 0 1 56.42 56.457 3 0.0015874 16962 20230619_1882_Aki_TMTPro18x_K_F3 72.34 58.748 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8612 3273 8147 16380 13146 13146 1 9606 Homo sapiens -0.06981117614850518 FIEGISEK Unmodified 921.48075 0.48074791 4491;3802 Q05CW7;Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 no no 0 0 0 5 0 1 53.513 53.583 3 0.010315 15293 20230619_1885_Aki_TMTPro18x_K_F5 82.426 32.386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8613 3802;4491 8148 16381 13147 13147 1 9606 Homo sapiens 0.01686676286283273 FIEIAAR Unmodified 818.46504 0.46503826 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4;A0A1W2PPE9 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 5.5 2.69 1 1 1 1 51.172 51.23 2 0.006446 14024 20230619_1888_Aki_TMTPro18x_K_F8 132.96 92.274 1955100 1704800 1722200 1839900 1898000 2209100 2115000 2092000 2115100 2118700 2075900 1990000 2496100 1995100 1818100 2506700 2352500 2255300 1806800 1561800 1772500 1852500 1964400 2203400 2120000 2145700 2154200 2136100 2149000 2027500 2501600 2085300 1894000 2494700 2245000 2145100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 9138700000 8614 3776 8149 16382;16383;16384;16385 13148;13149;13150 13150 3 9606 Homo sapiens 0.04854434559888432 FIFDCVSQEYGINPER Unmodified 1972.8989 0.89891233 1964 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 0 0 0 6 0 1 62.987 63.035 3 0.021908 19496 20230619_1886_Aki_TMTPro18x_K_F6 52.172 41.833 48420 52507 56547 60072 48330 66286 67768 64693 65866 67688 64912 63969 68946 48395 70109 70976 67691 70946 44926 48094 56693 60139 51427 66497 67145 66286 67185 68113 66839 64592 70220 51683 71143 70953 64812 67373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 392130000 8615 1964 8150 16386 13151 13151 1 9606 Homo sapiens -0.04862116767276348 FIGEGAR Unmodified 748.38679 0.38678794 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8;Q59GS3;J3QSA9;J3KRP2;J3QQM1 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 5 0.816 1 1 1 40.184 40.259 2 0.0074515 9625 20230619_1885_Aki_TMTPro18x_K_F5 125.08 67.75 625230 474590 576570 651380 709180 738130 662460 713600 918080 712430 740970 722000 759840 619760 635120 824380 892750 740280 577500 436040 592110 644230 725110 739220 678520 730500 913290 720780 769050 729410 769190 653480 663220 819880 850630 704570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 443990000 8616 1202 8151 16387;16388;16389 13152;13153 13153 2 9606 Homo sapiens 0.002530019746700418 FIGELFK Unmodified 852.47454 0.47454032 1676;2901;949 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;A0A0A0MSA7;A0A8I5QJH9;A0A804HJV5;A0A8J9G7U8;A0A8I5KT99;A0A0U1RQK7;Q59GJ0;A0A8I5KV92;O43432-4;O43432;O43432-3;B4DZE1;B4DH17 EIF4G1;EIF4G1 variant protein;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 0 0 1.5 0.5 1 1 62.749 62.754 2 0.037427 19861 20230619_1881_Aki_TMTPro18x_K_F2 97.602 6.6163 894550 732350 775760 891440 710360 929930 931350 852650 959440 928210 813310 731520 952940 735180 819910 986710 849020 838070 826260 671820 797900 887590 750260 935350 926910 878690 970330 928270 846960 752180 961360 771890 838610 978720 811970 797620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 386590000 8617 1676;2901;949 8152 16390;16391 13154 13154 1 9606 Homo sapiens 0.04240202845414842 FIGPDQHR Unmodified 968.48281 0.48281359 4345 Q96EY7;B2RDU4;Q96EY7-2 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes no 0 0 0 5.5 0.5 1 1 35.266 35.338 3 0.00039789 7758 20230619_1886_Aki_TMTPro18x_K_F6 127.46 86.159 32890 23973 37651 38077 47962 47389 47793 50220 50661 45005 43664 41665 45579 37908 37156 46124 50784 44319 30428 22068 38008 37406 48934 47268 48286 50945 51173 45662 45194 42338 46070 39668 38730 46092 48414 42137 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79540000 8618 4345 8153 16392;16393 13155 13155 1 9606 Homo sapiens -0.0026885018525035775 FIGPSPEVVR Unmodified 1099.6026 0.60259438 332 A0A024R5C5;P11498;A0A494C101;A0A494C0T2;A0A494C016;P11498-2;E9PRE7 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 7 0.816 1 1 1 50.197 50.275 2 0.00095645 13652 20230619_1888_Aki_TMTPro18x_K_F8 114.64 72.174 348260 271420 326820 364200 321750 361520 336770 334270 430480 461990 512620 490160 517630 426600 469270 508060 476840 525410 321770 249280 333900 360040 335270 365130 341730 346880 436630 460910 522090 494230 525660 446540 478690 510120 456500 498670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 232220000 8619 332 8154 16394;16395;16396 13156;13157 13157 2 9606 Homo sapiens 0.05677718368656315 FIGSPPGYVGHEEGGQLTK Unmodified 1971.969 0.96904081 1218 A0A2U3TZY2;A0A140VK11;Q9H078-4;Q9H078-2;Q9H078;Q9H078-5;Q9H078-3;Q7Z777;A0A2R8Y602 CLPB Caseinolytic peptidase B protein homolog yes no 0 0 0 7 0 1 50.691 50.771 3 8.4807E-15 13939 20230619_1887_Aki_TMTPro18x_K_F7 160.09 146.06 75768 61364 67904 79392 70823 81629 77909 74616 90573 96955 104820 111310 99681 85747 99184 114480 126450 136080 69996 56330 69751 78702 73583 82206 78545 77341 92144 97208 106700 111470 101910 90838 102460 115730 120790 128990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106560000 8620 1218 8155 16397 13158 13158 1 9606 Homo sapiens 0.021935048928526157 FIHDQTSPNPK Unmodified 1282.6306 0.63060004 2860 D9HTE9;Q6LAP8;P53007;B4DP62 SLC25A1 Tricarboxylate transport protein, mitochondrial yes no 0 0 0 6.5 0.5 1 1 39.659 39.735 3 1.4698E-05 9135 20230619_1887_Aki_TMTPro18x_K_F7 142.08 122.32 97965 85672 109630 113710 130330 123820 127900 137580 144640 105670 140530 141170 147080 112600 126880 113080 134370 122700 90714 78643 110710 112670 133480 124780 129650 138730 146080 109610 144660 140760 148840 117160 129710 114240 128410 116480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 266700000 8621 2860 8156 16398;16399 13159;13160 13160 2 9606 Homo sapiens 0.0005899655809571414 FIHSCAK Unmodified 861.41671 0.41670786 379 G3V4W4;A0A024R649;Q96EK6;G3V5E4 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes no 0 0 0 2 0 1 37.35 37.41 3 0.0038844 8648 20230619_1881_Aki_TMTPro18x_K_F2 107.59 70.573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8622 379 8157 16400 13161 13161 1 9606 Homo sapiens -0.01954382351652839 FIIPNVVK Unmodified 928.57459 0.57458871 3370 V9HWB9;P00338;P00338-3;B4DJI1;P00338-5;P00338-2;F5GYU2;F5GXY2 HEL-S-133P;LDHA L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 4.5 0.5 1 1 61.48 61.506 2 0.0012201 18939 20230619_1883_Aki_TMTPro18x_K_F4 119.89 44.577 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8623 3370 8158 16401;16402 13162;13163 13162 2 9606 Homo sapiens 0.10744440179234971 FIITALPTIYHCK Unmodified 1575.8483 0.84832073 4510 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 yes yes 0 0 0 6 0 1 61.659 61.713 3 1.8136E-11 18882 20230619_1886_Aki_TMTPro18x_K_F6 189.33 156.7 222460 172910 193540 205300 192020 235400 208290 197060 216280 131290 112080 106920 147940 88696 166310 176300 163020 119200 205410 158610 199080 205060 200260 234820 209280 202270 215560 135640 121550 109250 150550 96828 168650 172520 155700 113980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 414850000 8624 4510 8159 16403 13164 13164 1 9606 Homo sapiens 0.08343050436337762 FILIQNR Unmodified 902.53379 0.53378653 3192 M0R0N4;M0QYZ2;P53680;X6R390;P53680-2 AP2S1 AP-2 complex subunit sigma yes no 0 0 0 5 0 1 53.432 53.504 2 0.01875 15265 20230619_1885_Aki_TMTPro18x_K_F5 119.03 92.687 138170 136800 120720 99442 124850 185740 144310 139490 207810 32062 30757 37097 36953 36125 63387 45106 39434 36280 127790 124910 124090 104810 130420 180190 146180 142780 200450 38712 40262 37502 38883 37729 62566 44755 37940 34564 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50695000 8625 3192 8160 16404 13165 13165 1 9606 Homo sapiens 0.07862098859607158 FILMDCMEGR Unmodified 1270.5508 0.55083486 4709 Q9Y2Q5;Q9Y2Q5-2 LAMTOR2 Ragulator complex protein LAMTOR2 yes no 0 0 0 6 0 1 61.487 61.542 2 0.011834 18804 20230619_1886_Aki_TMTPro18x_K_F6 74.464 55.849 93002 74714 92720 83376 90562 107750 103600 113390 119370 97024 103040 90960 103700 76384 102460 110020 106140 111760 85985 68487 94138 83875 94661 107220 104220 114940 119990 98763 106450 92224 105690 81123 104460 110080 101560 106110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95621000 8626 4709 8161 16405 13166 13166 1 9606 Homo sapiens -0.07361852703434124 FILNLPTFSVR Unmodified 1305.7445 0.74450759 1203 B7Z478;A0A140VJS6;P49721;A0A087WVV1 PSMB2 Proteasome subunit beta type-2 yes no 0 0 0 8 0 1 64.385 64.406 2 7.4114E-17 19691 20230619_1888_Aki_TMTPro18x_K_F8 183.81 136.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8627 1203 8162 16406 13167 13167 1 9606 Homo sapiens 0.10386511390947817 FILPVNEGK Unmodified 1015.5702 0.57023162 1128 A0A0S2Z5I7;Q9Y3A5;A0A8V8TMR6;A0A8V8TLA5;A0A8V8TLC6;A0A8V8TMS1 SBDS Ribosome maturation protein SBDS yes no 0 0 0 4.5 3.5 1 1 58.055 58.078 3 0.00012366 17704 20230619_1880_Aki_TMTPro18x_K_F1 135.83 100.42 112550 85375 100080 121950 89776 119420 116870 107700 129090 130740 133880 141070 153460 125070 124840 155200 138320 171380 103930 78476 102710 120040 94986 120600 116640 111520 131040 131220 138020 142200 154610 131180 128370 156280 132440 162490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 114790000 8628 1128 8163 16407;16408 13168;13169;13170 13169 3 9606 Homo sapiens 0.06306930965661195 FIMESGAK Oxidation (M) 897.4266 0.42660385 3494 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;Q9NQS8;A7E2S3 RPS3 40S ribosomal protein S3 yes no 0 1 0 7 0.632 1 3 1 45.434 45.509 2;3 0.01218 11614 20230619_1888_Aki_TMTPro18x_K_F8 75.109 28.042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8629 3494 8164 16409;16410;16411;16412;16413 13171;13172;13173;13174;13175 13175 2162 5 9606 Homo sapiens -0.026212391369199395 FIMESGAK Unmodified 881.43169 0.43168922 3494 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;Q9NQS8;A7E2S3 RPS3 40S ribosomal protein S3 yes no 0 0 0 7.5 0.5 1 1 50.51 50.589 3 0.00036723 13747 20230619_1888_Aki_TMTPro18x_K_F8 133.55 81.761 89776 73197 89378 85926 84476 98123 89465 88675 111690 104260 96739 94772 113960 91246 81644 128360 114350 102390 83008 67125 90731 85916 88341 98085 90623 91653 111970 104280 100660 96583 114230 96197 85650 126800 109010 97571 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 540400000 8630 3494 8164 16414;16415 13176 13176 1 9606 Homo sapiens -0.013769352743111085 FIMGDSSVQDQWK Oxidation (M) 1555.6977 0.69769333 2028 P18031;A8K3M3;B4DSN5 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type yes no 0 1 0 7 0 1 55.932 55.99 3 0.037738 16154 20230619_1887_Aki_TMTPro18x_K_F7 52.071 39.304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8631 2028 8165 16416 13177 13177 1271 1 9606 Homo sapiens -0.0579276101314008 FIMGDSSVQDQWK Unmodified 1539.7028 0.70277871 2028 P18031;A8K3M3;B4DSN5 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type yes no 0 0 0 7 0 1 60.763 60.806 3 0.0014181 18131 20230619_1887_Aki_TMTPro18x_K_F7 87.719 56.124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8632 2028 8165 16417 13178 13178 1 9606 Homo sapiens -0.045484571505085114 FINDCTELFR Unmodified 1313.6074 0.60742176 3335 O94874;O94874-3;O94874-2 UFL1 E3 UFM1-protein ligase 1 yes no 0 0 0 6 0 1 59.013 59.078 2 1.6013E-07 17735 20230619_1886_Aki_TMTPro18x_K_F6 154.85 109.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8633 3335 8166 16418 13179 13179 1 9606 Homo sapiens -0.03683765550931639 FINDQYEK Unmodified 1055.4924 0.49237523 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;A0A0S2Z5W9;Q9UHD8-4;Q9UHD8-8;Q9UHD8-9;A0A6Q8PHC2;K7EL40;K7EK18;K7ER52;K7EIE4;K7EQD7 SEPT9 Septin-9 yes no 0 0 0 4.5 0.5 1 1 49.065 49.122 2 7.8396E-05 13540 20230619_1883_Aki_TMTPro18x_K_F4 183.47 128.75 245880 201500 221300 231740 251020 263000 287100 285410 331380 331470 366190 364040 382240 307310 318080 395770 378540 353330 227170 184750 227380 232050 259330 264160 288740 291210 336480 333480 374690 366280 386460 323530 328330 393710 361430 336140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 661750000 8634 541 8167 16419;16420 13180 13180 1 9606 Homo sapiens -0.03315126690381476 FINHSCEPNCYSR Unmodified 1682.693 0.69295908 1783 A0A8I5KXR3;Q03164-2;Q03164;Q03164-3;B4DIJ7 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180;Histone-lysine N-methyltransferase yes no 0 0 0 7 0 1 37.584 37.649 3 5.9621E-16 8341 20230619_1887_Aki_TMTPro18x_K_F7 210.91 203.18 26532 21355 27502 27994 28694 32599 31892 27208 31188 30720 35633 27317 31768 28483 40364 31058 31609 24113 24538 19607 27881 27780 29791 32487 31947 28275 31981 30768 36148 27958 32950 29464 40356 30820 30276 23003 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40204000 8635 1783 8168 16421 13181 13181 1 9606 Homo sapiens -0.12107968427517335 FINLQPSTLTDK Unmodified 1375.7347 0.73473076 1687 A0A7P0T7Z9;A0A7P0T9B4;A0A7P0TAM5;A0A7P0T9U2;Q8NBU5-2;Q8NBU5;B4E2J1 ATAD1 ATPase family AAA domain-containing protein 1 yes no 0 0 0 1.5 0.5 1 1 60.599 60.605 3 5.5953E-07 18879 20230619_1881_Aki_TMTPro18x_K_F2 149.23 114.85 91519 73362 80852 107130 88329 103840 113730 110520 115530 109900 107490 123440 124210 112030 108820 138810 130270 158930 84532 67438 83320 105310 91885 105350 113220 112470 117290 111510 111510 124320 125580 117360 112280 140080 124630 150640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118230000 8636 1687 8169 16422;16423 13182;13183 13183 2 9606 Homo sapiens 0.06189278594933967 FINVPPQIALPMYQQLQK Unmodified 2127.1551 0.15506744 4645 Q9P287-2;B4E318;B4DUS0;Q9P287-4;Q9P287-3;Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes no 0 0 0 6 0 1 64.298 64.345 3 1.5034E-09 20064 20230619_1886_Aki_TMTPro18x_K_F6 130.72 110.59 37855 30774 33981 40997 29783 40475 31888 43375 37764 35246 38925 27899 42114 23879 35563 35619 34699 51541 34972 28258 34823 40547 31405 41004 32259 43863 38180 35821 39940 28578 42480 25483 36237 36480 33325 48724 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87128000 8637 4645 8170 16424 13184 13184 1 9606 Homo sapiens 0.13657610807831588 FIPCSPFSDYVYK Unmodified 1621.7487 0.74866627 1217 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;B4DLZ4 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 2.5 0.5 1 1 63.194 63.213 3 1.9573E-06 19764 20230619_1882_Aki_TMTPro18x_K_F3 138.24 117.77 157250 122910 128400 197850 142290 175740 152610 132530 138370 230060 180070 165970 246020 178940 136060 277290 201690 195140 145140 113130 133470 193090 147140 178290 152850 141110 144000 225250 185460 171960 243600 189440 144700 272040 192300 186240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 597660000 8638 1217 8171 16425;16426 13185 13185 1 9606 Homo sapiens -0.037338119682999604 FIPEFIR Unmodified 920.51199 0.51198846 1110 A0A0S2Z4Y5;Q5QPK2;H0Y368;O60762;A0A804HJ93;A0A804HIK9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes no 0 0 0 1 0 1 61.37 61.37 2 0.016263 19020 20230619_1880_Aki_TMTPro18x_K_F1 98.415 42.404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8639 1110 8172 16427 13186 13186 1 9606 Homo sapiens 0.04855294111030162 FIPEGSQR Unmodified 932.47158 0.4715802 792 B7Z6S9;A0A068F579;A0A068F658;A0A0G2JLB3;B2R6A7;D3DV87;B7Z7G9;A0A0G2JNZ5;P04062-4;P04062-2;P04062;B7Z6E6;A0A223PQI4;B7Z731;A0A0G2JNZ0;P04062-5;A0A068F4C8;A0A068F753 GBA Glucosylceramidase yes no 0 0 0 4.5 0.5 1 1 41.799 41.863 2 0.0054699 10285 20230619_1885_Aki_TMTPro18x_K_F5 113.41 84.899 77452 58022 65926 81892 98882 112430 107550 105670 132850 87084 117190 113830 103020 85431 105370 99470 118130 107940 71492 53329 68551 81091 100420 111160 108640 107910 133070 89895 120330 113430 105700 89801 107770 100230 112830 102470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228190000 8640 792 8173 16428;16429 13187 13187 1 9606 Homo sapiens 0.0026432772061752985 FIPLIPIPER Unmodified 1193.7172 0.7172302 120 A0A024R104;Q12860-2;Q12860;Q12860-3 CNTN1 Contactin-1 yes no 0 0 0 2.5 0.5 1 1 63.791 63.811 2 0.0005171 20041 20230619_1882_Aki_TMTPro18x_K_F3 121.58 86.503 205560 202280 254150 193510 55657 68239 92318 92241 92779 190830 266820 251650 218280 217390 238080 228060 256290 278530 190690 185050 250660 194850 74439 79300 91550 95487 101550 189220 263360 251580 225390 225820 242710 231880 245200 263940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 267520000 8641 120 8174 16430;16431 13188 13188 1 9606 Homo sapiens 0.1281202785057758 FIPLIQAM Unmodified 931.52011 0.5201103 4771 yes no 0 0 0 3 0.707 1 2 1 67.639 67.664 2 0.012803 21613 20230619_1882_Aki_TMTPro18x_K_F3 95.445 89.08 + 4869.6 5177.2 4245.4 5300.5 3437 4282.9 4909.5 5651.3 7247 6257 8824.5 7539.4 8636.8 8465.6 8108.2 12237 8550.2 8609 4506.5 4737.7 4359.6 5332.7 3683.1 4441.2 4939.7 5694.6 7303.4 6333.4 8961.6 7647.1 8803.1 8888.6 8302.4 12021 8176.9 8215.1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 10664000 8642 4771 8175 16432;16433;16434;16435 13189 13189 1 9606 Homo sapiens 0.051611050361543676 FIPYTEEFSEK Unmodified 1388.65 0.64999808 1873 B4DWG1;A0A994J542;B3KM47;Q9Y6Y8;Q9Y6Y8-2;H7C0V8;H7C4C4 SEC23IP SEC23-interacting protein yes no 0 0 0 4.5 0.5 1 1 61.16 61.187 3 0.011814 18438 20230619_1885_Aki_TMTPro18x_K_F5 49.777 35.619 72262 70874 74441 87889 78765 91343 93013 80360 100890 72908 88145 66304 63490 61257 98449 78232 66281 88221 66919 64988 75602 87380 81874 91844 93158 82716 101680 73952 89879 67552 67261 64249 97622 78960 63880 83607 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170250000 8643 1873 8176 16436;16437 13190 13190 1 9606 Homo sapiens -0.02878091941670391 FIQAWQSLPEFGITHFIAR Unmodified 2260.1793 0.17930835 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8;H0YJB6 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 6 0 1 64.634 64.678 3 0.00011374 20232 20230619_1886_Aki_TMTPro18x_K_F6 78.917 52.935 14108 12088 15832 17082 10702 17924 15128 17203 17216 19543 19184 17058 20508 18845 19596 19580 19475 23431 13063 11105 15877 16846 11686 18023 15077 17681 17508 19549 19636 17497 20852 19424 19937 19881 18662 22200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43654000 8644 385 8177 16438 13191 13191 1 9606 Homo sapiens 0.09962587285690461 FIQNTCNEVEHK Unmodified 1517.6933 0.69327665 4288 Q8WXH0-2;Q8WXH0;D4YW74;G3V5X4 SYNE2;TROPH Nesprin-2 yes no 0 0 0 4.5 0.5 1 1 44.663 44.725 3 8.9363E-10 11527 20230619_1885_Aki_TMTPro18x_K_F5 176.25 156.41 43233 29970 39265 35930 34062 44984 39174 40897 46431 40878 51399 50874 54205 39690 45297 50595 52644 52540 39908 27508 40125 35928 36009 44688 39451 42057 47056 41623 52611 50835 54767 41911 46652 50762 50297 49882 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60668000 8645 4288 8178 16439;16440 13192 13192 1 9606 Homo sapiens -0.04486225436039604 FIQPNIGELPTALK Unmodified 1539.8661 0.86607929 3873 Q14008-2;Q14008;Q14008-3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 2.5 0.5 1 1 62.763 62.783 3 0.0010442 19867 20230619_1881_Aki_TMTPro18x_K_F2 80.187 64.921 60677 52434 61659 64340 50458 62136 62432 62738 67276 67581 66863 58471 66267 55832 66350 70817 61303 66023 56133 48094 62408 63980 53663 63003 62433 64188 68255 67761 68551 59725 67641 58480 67218 70645 58736 62743 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93468000 8646 3873 8179 16441;16442 13193 13193 1 9606 Homo sapiens 0.11774088962852147 FIQQTYPSGGEEQAQYCR Unmodified 2160.9535 0.9534671 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;A0A3B3IT07;Q8WUM4-3;F8WEQ7;F8WBR8;C9IZF9 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 5 0 1 48.936 49.012 3 8.534E-14 13326 20230619_1885_Aki_TMTPro18x_K_F5 155.1 153.36 54061 52814 56724 69648 62198 68187 64961 53845 58717 67654 70862 71872 67513 56648 68248 77811 69609 81185 50070 48460 57562 68893 64205 68738 65144 56436 60702 67750 72012 72263 69033 60064 69521 78007 66668 77032 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115230000 8647 3981 8180 16443 13194 13194 1 9606 Homo sapiens -0.08057149686510456 FIQTFGK Unmodified 839.45414 0.45413923 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 3.5 0.5 2 2 55.346 55.372 2;3 0.01367 16359 20230619_1883_Aki_TMTPro18x_K_F4 86.953 59.991 259710 196480 225710 253760 231750 275380 263650 267220 324260 303170 304040 337490 359730 291150 264550 399520 416230 371750 239770 180410 232400 251810 241420 276570 265860 274520 326140 305560 315450 339540 360950 307590 279780 397760 396470 353550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 373870000 8648 3758 8181 16444;16445;16446;16447 13195;13196;13197 13196 3 9606 Homo sapiens 0.027990321856123046 FIQVHPITK Unmodified 1081.6284 0.6284152 4096 Q69YJ7;Q9NTZ6;B4DRP9;B3KQH4 DKFZp667H197;RBM12 RNA-binding protein 12 yes no 0 0 0 4 0 1 48.798 48.836 3 0.002048 13425 20230619_1883_Aki_TMTPro18x_K_F4 74.772 48.653 273540 221470 253500 279420 262860 303200 279610 274660 319490 315920 314980 310900 336330 277980 293410 358130 362190 329430 252760 203240 259490 277690 272940 304110 282230 283710 323140 316950 324270 314810 340560 292070 303250 356810 345650 313320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233400000 8649 4096 8182 16448 13198 13198 1 9606 Homo sapiens 0.09086612610917655 FISELAR Unmodified 834.45995 0.45995289 4154 Q7L576;X5D2F4;A0A087WVZ5;B3KWV6;A0A0G2JQT1;A0A0G2JR96;E7EVJ5;Q96F07;Q96F07-2;H7C229;B7Z8N7;A0A8V8TNU3;B7Z3H2;B7Z4I3;B7Z217;E7EW33;Q9NSN1 CYFIP1;CYFIP2;DKFZp761H087 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 7 0 1 51.648 51.722 2 0.024502 14445 20230619_1887_Aki_TMTPro18x_K_F7 99.139 40.158 235780 220940 229470 238920 216990 280240 264620 227060 288410 260290 254420 233990 245270 193660 272630 246780 254530 253200 218170 202360 233560 240390 227980 279020 264710 236640 291050 260590 262200 237390 251810 204030 275600 247580 243700 240430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1687599999.9999998 8650 4154 8183 16449 13199 13199 1 9606 Homo sapiens 0.03610130697279601 FISLASLEYSDYSK Unmodified 1621.7876 0.78755419 3882 Q14232;F5H0D0;Q14232-2;H0YGG4 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes no 0 0 0 8 0 1 63.49 63.513 3 2.4777E-10 19315 20230619_1888_Aki_TMTPro18x_K_F8 169.62 137.79 95579 74100 93934 113160 89786 105400 110320 104620 107440 103350 117770 103920 122220 116820 128630 149580 122130 142010 88338 68161 95628 110900 94157 107090 109960 106960 110000 104570 120490 106090 124980 121750 130450 149300 117050 134890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308210000 8651 3882 8184 16450 13200 13200 1 9606 Homo sapiens 0.0015319186709348287 FISNPNSIILAVTAANTDMATSEALK Oxidation (M) 2707.3738 0.37384658 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;H0YI79;A0A994J6A0;A0A994J3G1;B4DDQ3;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;Q32Q67 DNM1L Dynamin-1-like protein no no 0 1 0 2 0 1 64.858 64.865 4 0.01103 20771 20230619_1881_Aki_TMTPro18x_K_F2 57.238 43.917 3374.5 3896.3 4359.2 3168.9 3293.5 4151.7 3642.7 4673.2 4172.9 3551.8 3714.5 4173.2 4728.3 3929.9 5122 3989.4 4329.4 5448.3 3135.9 3558.6 4323.3 3280.7 3516.7 4137.4 3674.6 4703.7 4202.2 3668.3 3882.5 4199.8 4810.7 4067.8 5151.6 4093.1 4157.7 5155.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30952000 8652 3212;3213 8185 16451 13201 13201 1891 1 9606 Homo sapiens 0.08845461007376798 FISSLSEIDAR Unmodified 1236.635 0.63501672 4744 Q9Y586 MAB21L2 Protein mab-21-like 2 yes yes 0 0 0 5.5 0.5 1 1 58.924 58.983 2 5.3343E-17 17671 20230619_1886_Aki_TMTPro18x_K_F6 235.66 200.04 75649 61747 62135 75633 48583 57106 78723 79526 75410 95093 98375 103350 103530 88860 105510 118220 109680 116010 69846 56648 64137 75017 52375 59667 77549 80129 77983 95444 100140 104070 105600 93680 107560 118160 104950 110190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167640000 8653 4744 8186 16452;16453 13202 13202 1 9606 Homo sapiens 0.026164609809939066 FITDNTVEER Unmodified 1222.583 0.58298115 2629 B7ZAX9;B4DZC0;O60264;Q4W5H1 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 2 0.816 1 1 1 46.481 46.533 2 1.7099E-19 12817 20230619_1881_Aki_TMTPro18x_K_F2 260.05 207.79 463670 397980 391060 470030 459090 466220 486300 465040 589690 553710 578330 577150 661240 502010 498480 634780 636200 585410 428320 364910 404760 468700 472200 471920 491840 477680 594490 555660 597320 582420 664200 527520 518080 632620 607020 556740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 642850000 8654 2629 8187 16454;16455;16456 13203 13203 1 9606 Homo sapiens -0.019407024327620093 FITEIWHPNVDK Unmodified 1497.7616 0.76161421 3708 P62253;K7EPR7;I3L2H7 UBE2G1 Ubiquitin-conjugating enzyme E2 G1;Ubiquitin-conjugating enzyme E2 G1, N-terminally processed yes no 0 0 0 8 0 1 60.095 60.132 3 0.00010631 17840 20230619_1888_Aki_TMTPro18x_K_F8 110.29 79.065 69671 55540 70322 73917 62122 78846 72108 77228 81886 84118 75345 75803 85516 75265 78179 89034 80843 88514 64417 51002 71290 73197 65530 79281 72463 79175 82658 84392 78068 77318 86627 78386 79836 89192 77377 84048 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81016000 8655 3708 8188 16457 13204 13204 1 9606 Homo sapiens 0.03264387206104402 FITHAPPGEFNEVFNDVR Unmodified 2088.0065 0.0064889465 3638 P52907;A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 yes no 0 0 0 5.5 1.12 1 1 1 1 58.443 58.487 3 7.6785E-24 17437 20230619_1886_Aki_TMTPro18x_K_F6 202.03 184.33 166750 129760 166400 178300 158060 159660 165390 182380 172310 184910 200440 192530 245590 165500 207710 234100 170430 230520 154140 119210 168980 175830 164900 163390 166700 184810 176390 186890 206250 194350 247030 175440 209990 233850 163840 218770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1807999999.9999998 8656 3638 8189 16458;16459;16460;16461 13205;13206 13205 2 9606 Homo sapiens 0.006005961584378383 FITIFGTR Unmodified 953.53345 0.53345218 3416 V9HWE0;P08758;D6RBL5;D6RBE9 HEL-S-7;ANXA5 Annexin;Annexin A5 yes no 0 0 0 7 0.816 1 1 1 61.989 62.021 2 0.016901 18728 20230619_1887_Aki_TMTPro18x_K_F7 91.783 79.557 317570 286890 341550 376120 424590 456900 392020 387460 454740 482860 457940 452880 514400 445550 449750 522790 518000 522450 294020 263290 346410 373430 433480 454300 399110 403130 460270 482060 472120 460900 520250 463950 462640 523900 494990 496210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 548740000 8657 3416 8190 16462;16463;16464 13207;13208 13208 2 9606 Homo sapiens 0.05482679139765878 FITRPAK Unmodified 831.49667 0.49667274 922 U3KQC1;A0A0A0MQU0;Q9BV38;K7EIR0 WDR18 WD repeat-containing protein 18 yes no 0 0 1 5.5 0.5 1 1 39.819 39.908 3 0.026409 9504 20230619_1886_Aki_TMTPro18x_K_F6 77.674 56.168 132160 114160 128710 142960 155840 152130 148040 149740 191550 149680 182770 159320 158450 148280 156620 180030 192620 153650 122220 104730 131500 142120 159430 153130 151060 153140 192140 151670 186700 161100 162540 154880 161400 178880 183680 146360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153670000 8658 922 8191 16465;16466 13209 13209 1 9606 Homo sapiens 0.07418427313848497 FITYPFDQNR Unmodified 1299.6248 0.62478638 92 A0A024R0H6;Q8N7H5-3;Q8N7H5-2;Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog yes no 0 0 0 1.5 0.5 1 1 59.279 59.285 2 0.00019261 18285 20230619_1881_Aki_TMTPro18x_K_F2 138.26 106.89 51058 46655 42991 48459 54727 65382 55420 52527 60733 39808 40316 37372 40412 35379 45844 46336 44726 41739 47185 42720 44561 49017 55997 64537 55975 54212 60702 40892 42332 38023 41519 37131 46462 46131 42784 39704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81722000 8659 92 8192 16467;16468 13210 13210 1 9606 Homo sapiens -0.01304101953587633 FIVCLNK Unmodified 892.48406 0.48405915 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4.5 0.5 1 1 57.752 57.783 2 0.0078617 17396 20230619_1883_Aki_TMTPro18x_K_F4 121.87 38.644 621950 530720 581320 644700 607770 656030 705860 693400 748300 621880 537770 522540 641070 505630 614040 748190 694590 598110 574950 486770 594730 641950 631730 663440 707180 703920 751510 629480 566270 534910 649700 535020 630020 739160 663130 570030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 218490000 8660 3758 8193 16469;16470 13211 13211 1 9606 Homo sapiens 0.03351647859290097 FIVDGWHEMDAENPLHQPSPSLNK Oxidation (M) 2776.2915 0.29151393 1026 Q16836-2;Q16836-3;Q16836;E9PF18;A0A0D9SFP2;B3KTT6;A0A140VK76;B2RB06;A0A0A0MSE2;A0A804HLB5;A0A1W2PNM1;A0A1W2PQ78 HADH Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes no 0 1 0 5.5 0.5 1 1 55.919 55.988 4 0.0038457 16266 20230619_1885_Aki_TMTPro18x_K_F5 67.979 62.138 27074 21102 28700 31531 29720 27407 33272 27293 31968 42762 47083 52485 50322 44281 44237 47737 57318 61152 25040 19405 29047 30920 30825 28035 33304 28337 33286 42663 47775 52532 50983 46140 45831 48655 54742 57926 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139990000 8661 1026 8194 16471;16472 13212 13212 596 1 9606 Homo sapiens -0.02558016281000164 FIVDGWHEMDAENPLHQPSPSLNK Unmodified 2760.2966 0.29659931 1026 Q16836-2;Q16836-3;Q16836;E9PF18;A0A0D9SFP2;B3KTT6;A0A140VK76;B2RB06;A0A0A0MSE2;A0A804HLB5;A0A1W2PNM1;A0A1W2PQ78 HADH Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes no 0 0 0 6.5 0.5 1 1 60.232 60.284 4 1.8279E-20 18250 20230619_1886_Aki_TMTPro18x_K_F6 168.75 155.95 39316 36271 41910 44007 37667 57315 51823 45344 54195 53240 53383 55111 49803 43831 49300 50840 51331 65337 36404 33258 42336 43973 39949 56632 51490 47375 55036 53449 54672 55456 50928 45976 50267 51779 49190 61853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159340000 8662 1026 8194 16473;16474 13213 13213 1 9606 Homo sapiens -0.013137124183685955 FIVGSDR Unmodified 792.413 0.41300269 3899 Q14696 MESDC2 LDLR chaperone MESD yes yes 0 0 0 6.5 0.5 1 1 44.271 44.359 2 0.0096238 11351 20230619_1886_Aki_TMTPro18x_K_F6 119.07 95.763 244230 176760 224610 238710 265600 285090 267270 282730 301100 295530 376150 387480 364450 315230 323980 315180 430920 394960 225520 162410 230500 236560 272690 284680 270540 289300 307710 300730 381920 386670 370500 327580 335970 321250 411020 374420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 272400000 8663 3899 8195 16475;16476 13214;13215 13214 2 9606 Homo sapiens 0.008492711461371982 FIVIADFRK Unmodified 1107.6441 0.64406526 3604 Q53R32;P49247 RPIA Ribose-5-phosphate isomerase yes no 0 0 1 5 0 1 58.595 58.651 3 0.012092 17343 20230619_1885_Aki_TMTPro18x_K_F5 64.297 27.277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8664 3604 8196 16477 13216 13216 1 9606 Homo sapiens 0.09454899127990757 FIVLATALHEK Unmodified 1240.718 0.71795849 1393 H0YAN8;A0A2X0U4L4;O15013-7;O15013-4;O15013-5;O15013-6;O15013 ARHGEF10 Rho guanine nucleotide exchange factor 10 yes no 0 0 0 3 0 1 60.733 60.762 3 1.5517E-12 18697 20230619_1882_Aki_TMTPro18x_K_F3 189.57 147.53 46305 35643 46376 45385 33527 46227 45850 40171 48843 49498 45050 42816 52321 37479 51233 52521 49179 51916 42802 32720 46916 45047 36241 46521 45615 41731 49457 49328 46717 43600 53067 39674 52010 52497 47093 49307 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22688000 8665 1393 8197 16478 13217 13217 1 9606 Homo sapiens 0.10722822499633367 FIVNTLK Unmodified 833.50109 0.50108942 3514 P27694;I3L524;I3L2M5 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 56.13 56.153 2 0.005093 16687 20230619_1883_Aki_TMTPro18x_K_F4 143.56 47.936 213620 170540 186010 197790 217400 250270 230040 242410 262410 223210 228160 224290 260610 217110 236840 251480 237230 239960 197280 156390 191820 198240 223850 248890 232210 247580 264080 226730 237120 227500 263790 226020 241360 251500 226990 228030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 488360000 8666 3514 8198 16479;16480 13218 13218 1 9606 Homo sapiens 0.07767891736762067 FIVYSYK Unmodified 918.48511 0.485105 3685 P60983 GMFB Glia maturation factor beta yes yes 0 0 0 4.5 0.5 1 1 57.208 57.24 2 0.006075 17165 20230619_1883_Aki_TMTPro18x_K_F4 135.87 63.727 267990 239130 242160 251550 268220 331940 300690 285700 345870 115960 95520 72632 86065 60687 189850 111530 107860 67014 247740 219000 248670 254160 277800 328440 302460 290550 339080 125430 109470 75559 93055 65709 186250 109020 103710 64271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181340000 8667 3685 8199 16481;16482 13219 13219 1 9606 Homo sapiens 0.022601854998470117 FIWNSEK Unmodified 922.45487 0.45486751 1923 Q6LEU2;A3KLL5;P05026-2;P05026;A0A8I5KNT2 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 0 4.5 3.5 1 1 55.446 55.477 2 0.0018026 15901 20230619_1888_Aki_TMTPro18x_K_F8 166.05 75.065 215620 175760 202090 252200 237800 332230 313120 294260 410230 272240 260020 277040 289890 242970 274130 332730 315290 340680 199270 161520 207430 249270 246910 328700 314020 302640 405990 276790 275290 279980 294280 256550 281640 333160 301450 323400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 160360000 8668 1923 8200 16483;16484 13220;13221 13221 2 9606 Homo sapiens -0.00946173165334585 FIWTNHK Unmodified 944.48684 0.48683634 4003 Q53HG1;Q9UI09 NDUFA12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes no 0 0 0 4 0 1 48.11 48.15 3 0.0063847 13149 20230619_1883_Aki_TMTPro18x_K_F4 95.352 55.689 154080 118800 156630 154240 174230 264780 171310 196030 279540 134450 150330 141760 171440 138030 148070 179700 174820 165360 142440 109080 159240 154230 180290 257510 176190 203210 273030 139790 161140 143660 173240 144720 152620 179010 166950 157240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96381000 8669 4003 8201 16485 13222 13222 1 9606 Homo sapiens 0.012372393084660871 FKCDQCDYACR Unmodified 1521.5799 0.57990315 1351 A0A2R8Y595;A0A2R8YFL0;P49711-2;P49711 CTCF Transcriptional repressor CTCF yes no 0 0 1 6 0 1 39.729 39.818 3 0.001813 9455 20230619_1886_Aki_TMTPro18x_K_F6 87.568 82.677 44355 32335 52122 43732 58112 60074 59705 47627 38435 52285 57576 30117 33127 24218 61543 17553 23076 19832 41046 29708 52341 43445 59811 59225 59458 49650 41159 51888 56979 31406 35842 24870 59715 18025 22428 18824 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16524000 8670 1351 8202 16486 13223 13223 1 9606 Homo sapiens -0.16002360145080274 FKDDDGDEEDENGVGDAELR Unmodified 2223.904 0.90399353 4115 Q6NZY4 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes yes 0 0 1 1 0 1 47.335 47.335 3 2.0681E-05 13268 20230619_1880_Aki_TMTPro18x_K_F1 93.776 89.508 17134 12084 14531 17998 16595 18582 17824 15530 21848 24584 22469 20974 23892 18537 17978 23611 20805 22205 15810 11116 15030 17684 17121 18671 18018 16326 22075 24252 23067 21370 24046 19481 18573 23551 19888 21100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25416000 8671 4115 8203 16487 13224 13224 1 9606 Homo sapiens -0.15900230952274796 FKDDVMPATYCEIDLDK Oxidation (M) 2074.9227 0.92274382 10 Q96JZ5;A0A024QYS2;Q9HD45;Q8WUB5;Q5TB53 SMBP;TM9SF3 Transmembrane 9 superfamily member 3 yes no 0 1 1 5 0 1 56.357 56.418 3 0.0051631 16424 20230619_1885_Aki_TMTPro18x_K_F5 71.685 62.155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8672 10 8204 16488 13225 13225 4 1 9606 Homo sapiens -0.07172064115729881 FKDELWR Unmodified 992.50797 0.50796571 1610 A0A6M8YHF9;A0A6M8YDW2;A0A6M8YDW1;Q8IUF8-4;Q8IUF8;Q8IUF8-2 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA yes no 0 0 1 1 0 1 50.297 50.297 3 0.029585 14481 20230619_1880_Aki_TMTPro18x_K_F1 71.223 54.591 88876 76702 87700 70759 75421 90088 116860 121080 122390 129760 112910 108240 147340 106340 122460 151480 138440 135580 82200 70180 88940 72349 80452 90364 115590 121680 124070 129970 117770 110880 147990 112230 126000 150510 132290 128950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65673000 8673 1610 8205 16489 13226 13226 1 9606 Homo sapiens 0.011412046173290946 FKDPNAPK Unmodified 915.48142 0.48141661 772 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;A0A286R9D9;B3KQ05;B2RPK0;D3DQY9;A0A286R9F1;Q53TD0;P23497 HMGB1;HMGB1P1;hCG_1991922;SP100 High mobility group protein B1;Putative high mobility group protein B1-like 1;Nuclear autoantigen Sp-100 yes no 0 0 1 4.5 3.04 1 1 1 1 40.985 41.019 3 0.0047309 9886 20230619_1888_Aki_TMTPro18x_K_F8 90.71 61.967 1641800 980750 1417800 1541900 2016100 2054000 1818200 1862100 2290300 1813600 2188900 2276900 2321000 1981100 1948400 1575100 2561500 2075600 1513900 903540 1468400 1516800 2041500 2033300 1859000 1913900 2301100 1850700 2256500 2279000 2347500 2032300 2019200 1619100 2441500 1967900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3057999999.9999995 8674 772 8206 16490;16491;16492;16493 13227;13228;13229;13230 13230 4 9606 Homo sapiens 0.020295157259852203 FKDPNCVGTVLASRPHTLDGR Unmodified 2339.1804 0.18044734 1118 K7EQ55;K7EK33;A0A0S2Z569;Q96EP5-2;Q96EP5;K7EQ02;Q5IRN2 DAZAP1;DAZAP1/MEF2D fusion DAZ-associated protein 1 yes no 0 0 2 3.5 0.5 1 1 47.031 47.092 5 7.3594E-08 12837 20230619_1882_Aki_TMTPro18x_K_F3 110.4 100.71 87619 67716 83831 102830 104510 82062 93231 105110 81914 107430 95801 109990 105820 80194 92715 104330 108530 90143 80962 62285 85849 100650 106310 85143 94376 105850 84832 108400 98185 110460 107000 84998 95437 103640 103560 85836 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 820330000 8675 1118 8207 16494;16495 13231;13232 13231 2 9606 Homo sapiens 0.06442433592292218 FKEEGVRDVLK Unmodified 1318.7245 0.72450043 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;A0A804HK69;A0A804HKU1 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 2 7.5 0.5 1 1 46.638 46.706 4 0.0019218 12151 20230619_1888_Aki_TMTPro18x_K_F8 89.959 49.382 252400 193280 236290 264570 238670 283330 293280 289530 326840 333920 353740 343520 352290 305710 397320 390860 369450 378750 233170 177570 241640 261520 249380 285120 293590 296540 332150 335360 361690 347160 361730 321060 401660 390770 353820 359830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 344010000 8676 1736 8208 16496;16497 13233 13233 1 9606 Homo sapiens 0.0778871566037651 FKPEELVDYK Unmodified 1266.6496 0.64960415 3276 O60361 NME2P1 Putative nucleoside diphosphate kinase yes yes 0 0 1 6.5 0.5 1 1 55.322 55.39 3 0.00013531 15922 20230619_1887_Aki_TMTPro18x_K_F7 130.01 96.139 329650 239180 298500 369010 269980 380290 359190 349240 431520 449520 435990 517820 518060 441430 417510 500960 484580 605110 304360 220100 305950 361850 285890 382620 359210 361740 435880 451010 451180 519640 521390 461150 430520 508020 463830 573190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 270970000 8677 3276 8209 16498;16499 13234;13235 13235 2 9606 Homo sapiens 0.026945331291244656 FKPLSDK Unmodified 833.4647 0.46470391 3545 P35249;C9JZI1;P35249-2;C9J8M3 RFC4 Replication factor C subunit 4 yes no 0 0 1 2.5 0.5 1 1 45.415 45.493 3 0.065567 12342 20230619_1881_Aki_TMTPro18x_K_F2 60.973 18.152 444320 370830 445770 505210 426320 497310 486610 420270 598560 485930 523340 501990 549300 383840 476270 510730 501700 446380 410910 340560 452810 498840 446330 501610 490470 436830 600070 488360 541410 504960 555760 406810 487160 507540 479390 424860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 211940000 8678 3545 8210 16500;16501 13236 13236 1 9606 Homo sapiens 0.041310148400384605 FKPNSVTYR Unmodified 1110.5822 0.58219329 3081 H7BXY3;Q7L2E3-3;Q7L2E3;Q7L2E3-2 DHX30 Putative ATP-dependent RNA helicase DHX30 yes no 0 0 1 5 0 1 40.997 41.084 3 0.029881 9975 20230619_1885_Aki_TMTPro18x_K_F5 62.633 40.1 228070 189470 223950 239380 264490 280480 256490 287420 303940 170350 220180 217190 172560 171670 253820 180170 243620 192580 210880 173870 228520 238200 271280 280640 260580 289950 303080 180030 227900 216930 181710 178890 255680 181890 232840 182970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92514000 8679 3081 8211 16502 13237 13237 1 9606 Homo sapiens 0.03132547708855782 FKQESTVATER Unmodified 1294.6517 0.65172941 4506 Q9H307;A8K964 PNN Pinin yes no 0 0 1 6 0.816 1 1 1 38.023 38.107 3 6.8609E-05 8751 20230619_1886_Aki_TMTPro18x_K_F6 131.06 89.871 238920 196060 218760 246450 325340 295160 283700 279080 315520 293710 314370 252360 271720 197000 275950 197040 237860 132750 220770 179910 225600 245350 327940 294570 289390 286550 319590 294800 320330 256190 278540 205120 277950 194770 227220 127150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 494180000 8680 4506 8212 16503;16504;16505 13238;13239 13238 2 9606 Homo sapiens 0.016189618669159245 FKYDDAERR Unmodified 1198.5731 0.57308516 2288;2925 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;H0YCK7;E9PIZ1;P29692;P29692-3;E9PK01;P29692-4;E9PQZ1;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;E9PK06;E9PMW7;E9PN91;E9PKK3;E9PK72;E9PJD0;E9PNW6 EEF1D Elongation factor 1-delta no no 0 0 2 6 0.816 1 1 1 35.667 35.741 4 0.00037998 7856 20230619_1886_Aki_TMTPro18x_K_F6 112.75 92.048 286600 241690 288290 265840 405960 391460 351850 351160 362610 360080 413420 322700 337440 242810 348550 285970 308920 187790 265070 221470 294290 268270 410400 385600 358280 361580 370840 362240 417870 326760 346890 255440 351660 281510 295110 179850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1343600000 8681 2288;2925 8213 16506;16507;16508 13240;13241 13240 2 9606 Homo sapiens -0.01825845647499591 FLADQQSEIDGLK Unmodified 1462.7304 0.73037367 3440 P12270;P12270-2;Q58F23;Q504U6;Q5SWX9 TPR Nucleoprotein TPR yes no 0 0 0 5 0 1 59.103 59.157 3 4.2122E-05 17553 20230619_1885_Aki_TMTPro18x_K_F5 113.69 83.127 100820 89492 105960 107490 101470 103230 115490 103440 100950 110120 124340 93910 100970 86999 132880 97330 96693 99550 93314 82060 107140 107050 105980 104760 115220 105890 104600 110410 125330 95926 105250 90538 132370 97891 92885 94519 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167000000 8682 3440 8214 16509 13242 13242 1 9606 Homo sapiens 0.017517693813715596 FLAEEGFYK Unmodified 1102.5335 0.53351176 247 A0A024R3J7;P46977;A0A0C4DH80;E9PN73;E9PI32 hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 0 0 5.67 0.471 1 2 59.876 59.935 2;3 3.5778E-05 18096 20230619_1886_Aki_TMTPro18x_K_F6 130.56 104.18 418630 349500 401620 426620 403530 506120 472220 477290 564180 528900 552440 528950 604500 495920 526740 634980 540530 636380 387010 320600 409690 425560 421460 504940 475010 490890 569030 531900 569430 536170 611470 520130 538400 635590 517710 604070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1179200000 8683 247 8215 16510;16511;16512 13243;13244;13245 13244 3 9606 Homo sapiens -0.013653656509177381 FLALEGNPLR Unmodified 1128.6291 0.62914348 1188 A0A140VJN3;Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes no 0 0 0 2 0 1 60.225 60.236 2 0.00074564 18732 20230619_1881_Aki_TMTPro18x_K_F2 117.89 85.049 62097 53372 64069 69714 59949 72852 66657 64153 68941 75431 73225 74599 83252 69211 73858 88667 76883 85696 57453 48987 64897 69085 62814 73212 66914 66463 70331 75601 75381 75604 84189 72608 75522 88579 73593 81394 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64662000 8684 1188 8216 16513 13246 13246 1 9606 Homo sapiens 0.0699740725999618 FLANVSTVLTSK Unmodified 1278.7184 0.71835242 2774 CON__P01966 yes yes 0 0 0 5.5 0.5 1 1 62.982 63.029 3 0.004008 19318 20230619_1885_Aki_TMTPro18x_K_F5 71.548 44.219 + 139930 152380 156990 157440 215210 357290 234040 236810 400210 301050 327760 507440 258930 385990 338830 320250 312960 510990 129790 139450 159150 161150 220660 343050 239810 251840 395000 307420 337990 500770 271400 398040 341700 333650 301060 482590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1498499999.9999998 8685 2774 8217 16514;16515 13247 13247 1 9606 Homo sapiens 0.09014197428837178 FLAVGLVDNTVR Unmodified 1302.7296 0.7295858 3931 Q15393;A8K6V3;B3KQH1 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 2 0 1 61.896 61.906 2 1.4837E-12 19445 20230619_1881_Aki_TMTPro18x_K_F2 221.83 178.58 122080 96451 110900 136170 114730 136530 127610 131970 145790 131450 129730 136540 143400 117770 151590 151470 140860 144620 112780 88632 113810 134190 119330 137870 128490 135150 146850 133050 134550 137770 146280 123890 153410 151290 134910 137420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 897590000 8686 3931 8218 16516 13248 13248 1 9606 Homo sapiens 0.09033019522962604 FLCADYAEQDELDYHR Unmodified 2043.8633 0.86325511 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3;Q69YJ6;G3V3B0;Q9UKV3-3;Q9UKV3-2 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 0 3.5 0.5 1 1 54.013 54.048 3 2.0286E-28 15948 20230619_1882_Aki_TMTPro18x_K_F3 242.91 234.93 43750 36091 44489 47554 43124 47640 55021 51010 50493 48365 44060 42400 48045 44208 45142 48838 46501 47165 40462 33135 45138 47085 45190 48238 54638 51821 51450 48841 45686 43387 48796 45778 46050 48905 44483 44813 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278330000 8687 2896 8219 16517;16518 13249 13249 1 9606 Homo sapiens -0.11692199014964899 FLCNMTFLK Unmodified 1172.5722 0.57222223 2953 F2Z2U4;H0Y4W2;Q9Y4A5-2;Q9Y4A5;Q59FH1;A0A994J575;A0A994J4S5 TRRAP Transformation/transcription domain-associated protein yes no 0 0 0 2 0 1 36.084 36.142 4 0.060729 8133 20230619_1881_Aki_TMTPro18x_K_F2 51.727 3.7891 244450 146710 246470 297630 270700 239990 271890 267690 203580 324930 339110 453910 288100 247170 275560 280710 336370 446570 225680 135660 250800 287130 278590 247630 272170 273310 217150 328700 340130 447220 295050 263700 283860 290780 322010 422000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189110000 8688 2953 8220 16519 13250 13250 1 9606 Homo sapiens -0.007160996124184749 FLDAGHK Unmodified 786.40244 0.40243801 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DJ98;A0A8I5KYJ6;A0A8I5KXE2;B4DDM1;A0A8I5KTA1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 7 0.816 1 1 1 42.275 42.332 3 0.010571 10192 20230619_1887_Aki_TMTPro18x_K_F7 87.323 55.102 1078900 716570 837070 920140 1060100 1055000 1092100 1080400 1549800 1154200 1324600 1495200 1564600 1410600 1061500 1954700 1929100 2031900 994580 658280 874200 914280 1084800 1057400 1112900 1104000 1542700 1174000 1380500 1500700 1567200 1486100 1141100 1956900 1838000 1928800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1117400000 8689 2389 8221 16520;16521;16522 13251;13252;13253 13252 3 9606 Homo sapiens 0.0006928849171572438 FLDDLGNAK Unmodified 991.49746 0.4974606 2340 B3KN59;B3KM36;O95816-2;O95816 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 0 5.5 0.5 1 1 57.55 57.614 3 0.00080424 16911 20230619_1885_Aki_TMTPro18x_K_F5 102.62 51.276 95620 82201 91829 111100 115800 142240 127080 121750 139220 143310 133530 137820 147590 122520 119260 166510 144680 148950 88417 75476 94115 110160 118810 140930 127810 126350 141000 143530 137890 139660 148850 129210 123440 165490 138210 141640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 160230000 8690 2340 8222 16523;16524 13254;13255 13254 2 9606 Homo sapiens 0.001371771722460835 FLDGIYVSEK Unmodified 1169.5968 0.5968403 3540 Q53Z07;P32969;D6RAN4;A0A2R8Y5Y7;H0Y9V9;Q2NKY6;H0Y9R4 RPL9 60S ribosomal protein L9 yes no 0 0 0 6 0.816 1 1 1 61.263 61.311 3 0.00030487 18677 20230619_1886_Aki_TMTPro18x_K_F6 112.75 84.236 939090 654210 964850 1000700 836470 958910 950250 973680 1051000 1065700 1023600 1100200 1150400 948600 990740 1202800 1105600 1196500 867740 602060 976240 981290 882300 972710 955150 996330 1064400 1073000 1057600 1110100 1162400 997090 1017800 1203600 1057400 1136100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1750499999.9999998 8691 3540 8223 16525;16526;16527 13256;13257;13258 13256 3 9606 Homo sapiens 0.01882575066338177 FLDGNELTLADCNLLPK Unmodified 1931.9663 0.96626362 1305 A0A1U9X8Y4;Q5SRT3;Q53FB0;O00299 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 yes no 0 0 0 7 0.816 1 1 1 63.967 64 3 3.3535E-14 19627 20230619_1887_Aki_TMTPro18x_K_F7 166.9 144.1 206180 190760 200610 239260 144420 207240 251900 196540 264440 244940 221520 198630 234960 196640 206010 297880 292940 285130 190760 174970 203750 237170 153010 211650 247980 198830 266910 243650 229740 203890 234960 208320 215300 296680 279390 270980 2 2 2 2 1 2 2 1 2 2 2 2 1 2 2 2 2 2 1271900000 8692 1305 8224 16528;16529;16530 13259;13260 13260 2 9606 Homo sapiens 0.03755913443706049 FLDGNEMTLADCNLLPK Unmodified 1949.9227 0.92268424 2612 B4DWC4;Q6FIC5;Q9Y696;B3KTR3;Q9NVF8 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 0 0 6.5 0.5 1 1 63.505 63.545 3 3.1926E-07 19450 20230619_1887_Aki_TMTPro18x_K_F7 119.56 105.3 414750 269680 379150 306530 233100 340510 300860 284940 382650 623190 438800 394900 578970 383860 359990 654160 572640 499350 382740 247470 385500 307220 256410 340430 302260 303810 388860 604460 453110 410950 575510 411130 383240 643390 545330 476190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2265500000 8693 2612 8225 16531;16532 13261;13262 13262 2 9606 Homo sapiens -0.014280193250897355 FLDPAIWFEK Unmodified 1264.6492 0.64921022 236 A0A024R3C7;Q13315;B4DSP3 ATM Serine-protein kinase ATM yes no 0 0 0 3.67 3.09 1 1 1 65.638 65.642 3 0.020525 20208 20230619_1888_Aki_TMTPro18x_K_F8 62.303 44.977 4962.6 3053.4 3881.9 3520.3 2058.7 3851.8 3081.9 2894.4 4565.3 3368.6 3520.9 3843 3648.4 4160.3 4597 4921.2 5051.5 3942.4 4573.4 2803 4004.6 3522.3 2328.8 3844.7 3095.5 3037.8 4520.3 3398.7 3671.5 3892.5 3773.7 4314.2 4684.3 4878.3 4821.1 3759 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5402200 8694 236 8226 16533;16534;16535 13263;13264 13264 2 9606 Homo sapiens 0.02747158199917976 FLDPLPTSGITPGATVLTASGQTVGK Unmodified 2527.3534 0.35336913 2645 B4E1G9;Q5T440 IBA57 Putative transferase CAF17, mitochondrial yes no 0 0 0 3 0 1 63.712 63.743 4 0.076552 19981 20230619_1882_Aki_TMTPro18x_K_F3 40.104 31.284 23440 16327 16314 15216 16023 26858 24329 22309 25475 20088 22632 25410 27740 23826 21902 32990 28233 28576 21600 14953 17171 15623 16977 26152 24070 23040 25752 20599 23595 25522 27883 25100 22785 32724 26955 27188 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20368000 8695 2645 8227 16536 13265 13265 1 9606 Homo sapiens 0.15078658409811396 FLDSTGSR Unmodified 881.4243 0.42429566 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;Q75MG1;E7EMS9;E9PFE3;B7Z6N5;C9JF98;F8WDX8;Q9Y6E2-2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 0 5 0.816 1 1 1 42.591 42.665 2 0.0027237 10658 20230619_1886_Aki_TMTPro18x_K_F6 122.18 112.4 179190 139640 169640 193440 216410 243000 237890 232030 301220 238230 254010 255050 241320 220620 222510 254240 281510 233640 165570 128300 174020 191500 221800 241630 240440 237930 301180 241080 262260 257010 245990 230370 230000 253740 268440 222310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 485220000 8696 607 8228 16537;16538;16539 13266 13266 1 9606 Homo sapiens -0.02115951550376849 FLEAGIYEVPIIITDSGNPPK Unmodified 2272.1991 0.19910032 704 C9J126;A0A024RC42;P19022-2;P19022;A0A6Q8PHJ8;C9JMH2;A0A6Q8PF58 CDH2 Cadherin-2 yes no 0 0 0 7.5 0.5 2 2 65.435 65.457 3;4 3.8284E-05 20126 20230619_1888_Aki_TMTPro18x_K_F8 86.8 64.997 19528 14587 19427 19120 17172 19868 20482 20536 22641 24214 23962 26444 26185 21634 23344 30408 25197 29274 18046 13396 19708 18950 18112 20045 20534 21033 23008 24335 24637 26583 26516 22939 23931 30330 24119 27802 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91808000 8697 704 8229 16540;16541;16542;16543 13267;13268 13268 2 9606 Homo sapiens 0.11388873715122827 FLEEFITPIVK Unmodified 1334.7486 0.74858991 3433 P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 8 0 1 65.244 65.263 2 0.06818 20062 20230619_1888_Aki_TMTPro18x_K_F8 78.113 57.211 17554 12630 16082 21379 11339 17584 15811 13234 16788 19279 19665 17542 21007 15502 15835 21251 18531 17945 16208 11637 16424 20797 12316 17948 15717 14005 17171 19109 20079 17827 21135 16369 16372 21062 17700 17081 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8998100 8698 3433 8230 16544 13269 13269 1 9606 Homo sapiens 0.09460556094018102 FLEEHPGGEEVLR Unmodified 1510.7416 0.74160705 1420 Q59F44;A0A384ME44;P00167-2;P00167;P00167-3 CYB5A Cytochrome b5 yes no 0 0 0 1.5 0.5 1 1 47.185 47.223 3 0.059379 13237 20230619_1880_Aki_TMTPro18x_K_F1 42.798 19.707 17823 16176 17457 20426 20010 25451 19791 24007 23349 22983 25396 25412 28445 23383 26382 25307 30303 27552 16489 14839 17824 20339 20609 25309 20091 24582 23672 23356 26095 25623 28833 24296 27071 25532 28937 26155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188640000 8699 1420 8231 16545;16546 13270 13270 1 9606 Homo sapiens 0.006665914755103586 FLEEYLSSTPQR Unmodified 1468.7198 0.71980898 2963 F5GXX5;Q53G02;P61803;F5H895;A0A0B4J239 DAD1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 yes no 0 0 0 6.5 0.5 2 2 61.239 61.285 2;3 8.8012E-13 18666 20230619_1886_Aki_TMTPro18x_K_F6 235.32 198.13 596500 515590 580090 671820 586730 642430 709470 691960 764760 711220 736310 732450 835900 683640 754810 778760 737660 790660 551630 473210 591370 665170 612130 652960 709900 704170 774790 718450 761200 741080 845840 712010 768160 781720 706320 750660 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1067499999.9999999 8700 2963 8232 16547;16548;16549;16550 13271;13272;13273 13272 3 9606 Homo sapiens 0.00419786726934035 FLEMCNDLLAR Oxidation (M) 1396.6479 0.64790636 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;O14992 HSPA4;HEL-S-5a;HS24/p52 Heat shock 70 kDa protein 4 yes no 0 1 0 5.5 0.5 1 1 57.108 57.173 2 0.00052772 16932 20230619_1886_Aki_TMTPro18x_K_F6 111.61 86.831 109690 104770 110160 125360 141470 125610 121290 114120 127080 153620 159780 157820 170690 135500 149610 185690 159710 167090 101530 96047 112380 124910 143670 126860 123680 118480 130620 153220 162850 159320 172780 143170 153270 184650 152760 158880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204430000 8701 3544 8233 16551;16552 13274;13275 13275 2205 2 9606 Homo sapiens -0.034551672227962626 FLEMCNDLLAR Unmodified 1380.653 0.65299174 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;O14992 HSPA4;HEL-S-5a;HS24/p52 Heat shock 70 kDa protein 4 yes no 0 0 0 7 0 1 62.27 62.305 2 4.1662E-06 18847 20230619_1887_Aki_TMTPro18x_K_F7 183.13 171.28 422690 363520 441730 408230 254700 351280 374310 370110 354810 623640 531910 518960 598760 469730 504970 643600 597910 605500 391120 333160 444160 408140 282950 360000 370380 383600 370840 612960 540220 529830 604240 495620 521030 641380 571230 575490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 923470000 8702 3544 8233 16553 13276 13276 1 9606 Homo sapiens -0.022108633601646943 FLEPTLR Unmodified 874.49125 0.49125301 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 51.941 52.016 2 6.2681E-08 14464 20230619_1887_Aki_TMTPro18x_K_F7 163.84 63.924 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8703 1207 8234 16554;16555 13277;13278 13277 2 9606 Homo sapiens 0.04898703731373644 FLEQQNAALR Unmodified 1188.6251 0.62512073 2433 B3KWQ6;P41219;P41219-2 PRPH Peripherin yes no 0 0 0 6.5 0.5 1 1 47.922 48.006 2 1.8418E-09 12624 20230619_1887_Aki_TMTPro18x_K_F7 203.29 171.15 1095100 910030 913770 988550 805140 963560 944110 952020 1125800 1182700 1239800 1324600 1177300 1367600 944480 1287900 872720 1395200 1011300 833880 942140 991960 849950 976250 949910 979780 1141400 1187400 1264200 1339300 1194600 1403500 962740 1300700 839320 1322200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2741500000 8704 2433 8235 16556;16557 13279;13280 13280 2 9606 Homo sapiens 0.038353177662429516 FLEQQNK Unmodified 905.46068 0.46068117 3414;2803 P08670;V9HWE1;Q53HU8;B0YJC4;A0A1B0GTT5;P14136-2;P14136-3;P14136;A0A1X7SBR3;B4E192;B4DJW0;A0A1W2PR46;Q8IWY7;B4DIR1;CON__P78386;CON__Q61726;B4DN72;CON__O43790;CON__P78385;CON__Q6NT21;CON__Q14533;A8K872;CON__H-INV:HIT000292931;K7EJU1;A0JNT2;K7EKH9;K7ELP4;U3KPR1;P78386;Q14533;P78385;O43790;A0A1X7SCE1;CON__Q922U2;CON__Q5XQN5;B4E1T1;CON__P13647;P13647;CON__Q8BGZ7;CON__P50446;CON__P07744;CON__O95678;O95678;CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4-2;Q8N1N4 VIM;HEL113;GFAP;KRT83;KRT86;KRT85;KRT81;KRT5;KRT75;KRT78 Vimentin;Glial fibrillary acidic protein;Keratin, type II cuticular Hb5;Keratin, type II cuticular Hb1;Keratin, type II cuticular Hb3;Keratin, type II cuticular Hb6;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 78 no no 0 0 0 6.5 1.12 1 1 1 1 45.666 45.738 2 0.0035366 11953 20230619_1885_Aki_TMTPro18x_K_F5 154.35 32.361 + 1121500 666080 966030 786470 2613000 2796400 1397200 1646700 1802400 815420 947350 607510 890130 681020 1258600 637670 1110500 580800 1034100 611720 1017700 809850 2551900 2648300 1491000 1736400 1777700 865350 1008200 630420 927590 698300 1261500 640520 1060300 554190 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3429299999.9999995 8705 3414;2803 8236 16558;16559;16560;16561 13281;13282;13283;13284 13281 4 9606 Homo sapiens 0.004169253463260247 FLEQQNQVLQTK Unmodified 1474.778 0.77799256 2778;2787 CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;Q0IIN1;CON__Q9R0H5;Q7Z794;CON__Q7Z794;H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2;H6VRF9 KRT2;KRT77;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 1 no no 0 0 0 8 0 1 54.002 54.074 3 8.516E-10 15271 20230619_1888_Aki_TMTPro18x_K_F8 177.1 138.3 + 63534 57635 73973 126890 1670100 136310 419030 95036 224770 65987 60007 46711 83938 464150 90657 61700 83233 79375 58868 53276 96305 122300 1560700 140910 487420 100180 235040 68700 70566 62438 87968 442000 91487 69899 79682 75218 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 791440000 8706 2787;2778 8237 16562 13285 13285 1 9606 Homo sapiens 0.05959468372225274 FLESLPEEEQQR Unmodified 1503.7205 0.72053726 2929 E9PKP7;P17480-2;P17480;A0A994J4N4;A8K962;B4DNQ1;O00164;B4DLB0 UBTF Nucleolar transcription factor 1 yes no 0 0 0 1.5 0.5 1 1 54.462 54.474 3 9.9308E-10 16176 20230619_1880_Aki_TMTPro18x_K_F1 174.24 152.68 76076 71227 87925 94021 89972 98479 97766 99009 102870 99491 88329 104220 98495 88948 89892 95181 95164 107530 70499 65363 88403 93128 93448 99247 98297 101130 103980 100660 91878 104990 99836 92583 91882 96233 91086 101960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281260000 8707 2929 8238 16563;16564 13286;13287 13286 2 9606 Homo sapiens -0.011174186240168638 FLESQEFQPSIAK Unmodified 1522.7668 0.76675917 2656 B7Z7C0;Q86XZ2;Q58EX4;B7Z5X1;Q562F2;B5BTZ7;Q59EK0;Q16537-3;Q16537-2;Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes no 0 0 0 7 0 1 59.827 59.873 3 4.3512E-06 17767 20230619_1887_Aki_TMTPro18x_K_F7 128.68 101.97 87752 71996 79131 86940 68914 86621 82288 74020 92688 95120 98200 97026 97299 81633 91085 112730 96899 106760 81077 66040 81003 86561 72863 87318 82528 77107 94070 95068 100450 97920 99030 86355 93179 112380 92724 101430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116760000 8708 2656 8239 16565 13288 13288 1 9606 Homo sapiens 0.02628646278094493 FLESTDSFNNELK Unmodified 1542.7202 0.72020291 156 Q969G3;A0A2U3TZQ7;B4DGM3;A0A2R8Y855;A0A2R8Y4T4;A0A2R8Y7I9;A0A2R8Y7U4;J3QKS7;A0A2R8Y765;A0A024R1S7;Q969G3-5;Q969G3-6;Q969G3-3;Q969G3-2;Q969G3-4;A0A2R8YES3;J3QR61 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 0 0 0 4 0 1 60.096 60.098 2 0.003204 18362 20230619_1883_Aki_TMTPro18x_K_F4 85.377 58.779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8709 156 8240 16566 13289 13289 1 9606 Homo sapiens -0.029448383438420933 FLEYSISDEITK Unmodified 1443.7133 0.71332662 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3;Q9BTE3-3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 0 5 0 1 62.331 62.378 3 0.066401 18985 20230619_1885_Aki_TMTPro18x_K_F5 41.684 25.928 114700 101160 124570 100840 102830 99207 103100 100330 115810 135570 135320 109310 128270 115680 142190 129510 129080 137130 106180 92611 125210 101980 108410 100590 104440 103360 118140 134320 137480 112440 131810 119870 143560 130390 123680 130130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210110000 8710 1140 8241 16567 13290 13290 1 9606 Homo sapiens 0.009218487755788374 FLFENQTPAHVYYR Unmodified 1783.8682 0.86820455 3231 O15042-2;O15042;E7ET15;O15042-3 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 0 0 0 2 0 1 53.721 53.749 3 7.3891E-09 16048 20230619_1881_Aki_TMTPro18x_K_F2 158.53 140.99 183430 168580 185110 223510 189330 202170 213690 208750 220670 219190 192670 191130 209990 161070 204130 209540 179140 206270 169760 154720 188200 220860 196880 206210 214270 213150 223420 220070 199800 194260 213340 169820 206340 209600 171830 195850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164120000 8711 3231 8242 16568 13291 13291 1 9606 Homo sapiens 0.007625177006502781 FLFSLFGQK Unmodified 1085.591 0.59096706 71 A0A024QZY1;Q13155;B2R7M3;Q13155-2;A8MU58 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes no 0 0 0 7.5 0.5 1 1 65.335 65.359 3 0.00048302 20247 20230619_1887_Aki_TMTPro18x_K_F7 113.26 75.169 183080 152050 170200 171630 151620 182040 181040 180100 218870 121650 109180 98883 106290 96753 142730 126160 119020 100550 169210 139380 173710 171930 159940 183230 181970 182580 216160 125570 117090 101460 110390 101380 143090 124940 113980 95843 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144580000 8712 71 8243 16569;16570 13292;13293 13292 2 9606 Homo sapiens 0.05159521345331086 FLFVDADQIVR Unmodified 1321.703 0.7030367 2154 A8KAK1;Q9NYU2-2;Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 7 0 1 63.229 63.261 2 7.0952E-06 19323 20230619_1887_Aki_TMTPro18x_K_F7 193.01 141.66 106820 86806 98299 106150 101120 113900 118250 108920 126870 117370 125770 142590 123430 122420 145540 145540 140510 169320 98702 79637 100670 105710 105300 114480 118490 111890 128690 118950 129180 142900 127220 128110 147340 147210 134690 160460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204670000 8713 2154 8244 16571 13294 13294 1 9606 Homo sapiens 0.05505330631626748 FLGDIEVWDQAEK Unmodified 1548.746 0.74602373 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 4 0.816 1 1 1 63.612 63.64 3 7.0706E-11 19860 20230619_1883_Aki_TMTPro18x_K_F4 174.9 139.39 158400 130770 139530 155930 139100 132400 135890 126720 159490 188560 173680 204300 203430 150210 201980 209290 181470 209960 146330 119930 143350 155100 144350 135660 137980 131600 161940 187650 179090 204720 206410 159950 204330 209380 174020 199310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 520870000 8714 2326 8245 16572;16573;16574 13295;13296 13295 2 9606 Homo sapiens -0.006399441015901175 FLGGDMEHTHLVK Unmodified 1482.7289 0.72893388 2227 Q9H4P6;E7EQZ7;Q9UK43;Q95HA6;B2R5Y4;Q13123;Q9Y3Z5;D6REL4 IK;CSA2;DKFZp564B112 Protein Red yes no 0 0 0 6.5 0.5 1 1 48.087 48.171 4 1.8747E-11 12778 20230619_1887_Aki_TMTPro18x_K_F7 190.85 155.65 115330 99585 108350 101240 112760 185600 139050 129350 210480 116610 99774 113750 129410 107190 125280 146080 130940 138310 106620 91187 110770 103230 118110 179840 140740 135640 205700 118730 108980 115420 130990 112850 127890 145670 125280 131420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 325230000 8715 2227 8246 16575;16576 13297 13297 1 9606 Homo sapiens 0.0068785681162353285 FLGMHPCER Oxidation (M) 1161.5059 0.50593357 4753 Q9Y678;B3KW21;Q8WUI6;H0Y8X7 COPG1;COPG Coatomer subunit gamma-1 yes no 0 1 0 6.5 0.5 1 1 36.074 36.138 3 0.00067333 7757 20230619_1887_Aki_TMTPro18x_K_F7 100.25 88.398 117250 89075 126860 122980 141820 138740 148850 140540 154400 151200 155670 153550 183520 149040 139110 178750 193640 184640 108440 81846 128260 121620 146120 139160 149840 143740 157090 152320 160830 155680 184310 155520 145460 179360 184680 175340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174550000 8716 4753 8247 16577;16578 13298;13299 13299 2900 2 9606 Homo sapiens -0.068359154544396 FLGMHPCER Unmodified 1145.511 0.51101895 4753 Q9Y678;B3KW21;Q8WUI6;H0Y8X7 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 7.5 0.5 1 1 41.903 41.937 3 2.9345E-05 10276 20230619_1888_Aki_TMTPro18x_K_F8 134.77 113.86 75905 64754 70906 76433 80151 91122 83718 92305 100630 96366 87498 81513 103330 79937 90552 117800 102060 105210 70167 59375 72622 76437 82672 91053 84740 94269 101090 96730 91042 83456 104310 84549 93092 116970 97565 100050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102350000 8717 4753 8247 16579;16580 13300 13300 1 9606 Homo sapiens -0.055916115918307696 FLGPEDSHVVVASNSPCLK Unmodified 2055.0095 0.0095254139 3820 Q12788;A0JLS5;J3KNP2 TBL3 Transducin beta-like protein 3 yes no 0 0 0 7 0 1 53.643 53.71 4 6.9548E-20 15179 20230619_1887_Aki_TMTPro18x_K_F7 189.37 169.55 50710 41521 40116 47906 41080 47354 47483 43962 53269 56414 53016 54950 63079 48664 50767 69403 64723 58534 46809 38070 41696 47847 42813 47859 47678 45499 53969 56302 54852 55653 63456 51510 52710 68746 61749 55734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85877000 8718 3820 8248 16581 13301 13301 1 9606 Homo sapiens 0.024221032209879922 FLGQNVHAR Unmodified 1040.5516 0.55156186 2717 B8ZZB2;D3DVH3;Q96PE3-2;Q96PE3-4;Q96PE3-3;Q96PE3 INPP4A Type I inositol 3,4-bisphosphate 4-phosphatase yes no 0 0 0 2.5 0.5 1 1 36.927 36.983 3 1.0531E-06 8393 20230619_1882_Aki_TMTPro18x_K_F3 160.11 145.85 16659 12444 16720 16328 21988 27320 20307 20944 32346 21054 24988 28530 25198 18537 25293 23155 24962 25888 15396 11428 17062 16308 22425 26632 20935 21831 31938 21523 26015 28272 25697 19705 25687 23355 23893 24556 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19275000 8719 2717 8249 16582;16583 13302 13302 1 9606 Homo sapiens 0.03290814114461682 FLGSGPR Unmodified 732.39187 0.39187332 3406 P07954-2;A0A804HI24;A0A0S2Z4C3;P07954 FH Fumarate hydratase, mitochondrial yes no 0 0 0 2 0 1 42.007 42.087 2 0.0051171 10766 20230619_1881_Aki_TMTPro18x_K_F2 143.37 68.65 466080 375420 405850 463410 542140 572380 569780 565310 666560 510330 554890 545510 539940 445600 509850 620510 629880 515820 430470 344460 419730 462160 553100 570380 575620 576450 668630 520010 573870 549170 550230 472030 526180 614590 600720 491460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 365480000 8720 3406 8250 16584 13303 13303 1 9606 Homo sapiens 0.014973058372788728 FLGTVEK Unmodified 792.43815 0.43815481 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;Q96L66;A0A8I5KTQ3;E9PLT0;E9PNG3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 0 7 0.816 1 1 1 51.819 51.895 2 0.011243 14330 20230619_1888_Aki_TMTPro18x_K_F8 124.59 29.053 963610 819000 884110 907940 907050 1012700 991530 948610 1216700 1217500 1215300 1077400 1390500 1006300 895270 1405700 1290600 1113400 890630 750540 905220 911320 943210 1014900 1001800 980690 1227100 1212000 1253000 1098500 1389200 1061900 943660 1388300 1229800 1061300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 613520000 8721 88 8251 16585;16586;16587 13304;13305 13305 2 9606 Homo sapiens 0.033633259487032774 FLHCTEK Unmodified 933.43784 0.43783723 3312 O75643;A4FU77;B4E150;B4E0P5;Q9UNV9;A2RRQ7 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 7.5 0.5 1 1 39.713 39.74 3 0.0017905 9140 20230619_1887_Aki_TMTPro18x_K_F7 133.81 82.025 118960 80396 122290 131110 140750 152430 136730 144830 160390 137860 142380 153050 139800 119080 106590 142770 156880 152810 109910 74058 124280 128440 144630 152270 138850 148270 161310 140180 146840 153500 141240 125210 111950 143550 149590 145050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143960000 8722 3312 8252 16588;16589 13306 13306 1 9606 Homo sapiens -0.031544170427764584 FLHDNMVEIPNR Unmodified 1483.7242 0.72418285 3615 P49916-3;P49916;B7Z6I3;P49916-4;P49916-2;K7EJR4 LIG3 DNA ligase 3;DNA ligase yes no 0 0 0 6 0 1 49.974 50.051 3 0.00029053 13944 20230619_1886_Aki_TMTPro18x_K_F6 89.629 77.069 58166 46407 51684 57231 61136 63077 62391 65947 62981 58507 58346 48344 65457 45890 54491 68178 60670 56351 53727 42582 53213 56989 62758 63415 62864 66954 63958 59215 60324 49534 65998 48635 56018 67449 57959 53663 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81662000 8723 3615 8253 16590 13307 13307 1 9606 Homo sapiens 0.00166972668876042 FLHQDIDSGQGIR Unmodified 1484.7372 0.73719038 3435 Q59EZ3;P11717;A0A7I2V381 IGF2R Cation-independent mannose-6-phosphate receptor yes no 0 0 0 4.5 0.5 1 1 44.224 44.285 3 7.1912E-08 11348 20230619_1885_Aki_TMTPro18x_K_F5 120.59 80.237 86118 67046 80972 87835 100770 90779 96503 97146 117010 97899 119550 101960 125880 95825 100760 101430 114740 111820 79567 61563 82996 87035 102870 91765 98184 98826 118070 99060 122660 103190 127000 99419 103670 102430 109620 106110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 126180000 8724 3435 8254 16591;16592 13308;13309 13309 2 9606 Homo sapiens 0.014211270525720465 FLHTEIR Unmodified 914.4974 0.49740102 947 B1APQ0;B3KM51;A0A7I2V4N3;B3KN37;A0A0A0MRX9;A0A7I2V397;B4DRW8;A0A7I2V5C6;A0A7I2YQT2;B4DH07;Q5JRX3-3;Q5JRX3;Q5JRX3-2 PITRM1 Presequence protease, mitochondrial yes no 0 0 0 7.5 0.5 1 1 40.542 40.572 3 0.0013403 9470 20230619_1887_Aki_TMTPro18x_K_F7 146.21 79.212 49339 33109 45560 47423 53448 56673 59395 50355 64035 50829 52628 54209 57704 46907 51486 58703 60641 60850 45542 30451 46730 46820 55037 56453 59648 51919 64487 51480 54771 54642 58437 49264 53008 58900 57934 57773 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50708000 8725 947 8255 16593;16594 13310 13310 1 9606 Homo sapiens 0.036732219628902385 FLIATGERPR Unmodified 1158.6509 0.65094155 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7;E9PKD3 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 1 3.5 0.5 1 1 43.996 44.053 3 2.8123E-06 11292 20230619_1883_Aki_TMTPro18x_K_F4 139.32 89.282 323350 233770 320450 329240 348170 425980 307610 351260 442890 450920 438510 434670 488060 411020 388190 528830 453160 507180 298750 214890 326230 325780 358980 421510 316900 366460 443640 450000 452110 441330 491810 431020 400890 527890 433330 481750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 963280000 8726 682 8256 16595;16596 13311 13311 1 9606 Homo sapiens 0.07796212008565817 FLICTDVAAR Unmodified 1164.5961 0.59612879 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 4.5 3.5 1 1 55.512 55.543 2 0.00022954 15934 20230619_1888_Aki_TMTPro18x_K_F8 164.71 127.69 265560 212120 240220 271260 231600 288020 278010 271020 326740 311720 310470 313410 331600 281690 287370 345550 349230 364550 245330 194710 246240 269260 242860 289490 279120 279180 329470 312960 320230 317050 335730 295040 296730 347100 333650 345990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 207000000 8727 1661 8257 16597;16598 13312;13313 13313 2 9606 Homo sapiens 0.020414571456058184 FLIDGFPR Unmodified 963.5178 0.51780212 1828 A0A8V8TMN5;P30085;P30085-3;Q5T0D2;B4DFW6;A0A494BXC7;B4DDL4;P30085-2 CMPK1 UMP-CMP kinase yes no 0 0 0 1.5 0.5 1 1 61.576 61.581 2 0.009171 19276 20230619_1881_Aki_TMTPro18x_K_F2 113.89 88.439 378360 310690 361100 382410 346670 433270 435170 432030 475260 459400 426820 407050 471850 401520 417430 514670 436770 478250 349730 285040 368280 381010 364020 434100 434860 442110 480060 461280 442050 415630 477580 420370 427060 513060 418000 454480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 347460000 8728 1828 8258 16599;16600 13314 13314 1 9606 Homo sapiens 0.03458392622712836 FLILPDMLK Oxidation (M) 1104.6253 0.62530365 3720 P62318;P62318-2 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes no 0 1 0 3.5 0.5 1 1 63.422 63.44 3 0.026252 19861 20230619_1882_Aki_TMTPro18x_K_F3 55.567 27.825 29493 25561 26392 30575 31033 41335 32142 33990 42972 20184 18468 21882 23370 18403 26972 24975 20762 19787 27258 23440 27173 30597 31980 40790 32661 34856 42125 21239 20353 22029 23864 19442 27010 24712 19918 18852 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81203000 8729 3720 8259 16601;16602 13315 13315 2403 1 9606 Homo sapiens 0.0771760144189102 FLILPDMLK Unmodified 1088.6304 0.63038903 3720 P62318;P62318-2 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes no 0 0 0 3 0.816 1 1 1 64.979 64.996 2 0.00032145 20417 20230619_1883_Aki_TMTPro18x_K_F4 152.59 78.663 526680 509530 475730 482760 538110 1015400 287710 572230 771730 129810 105470 90736 101000 88416 288040 134600 120180 77609 487170 466120 488700 496600 552040 975080 320080 602260 730410 155380 139440 94308 112340 93651 279480 131840 116320 74473 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 404490000 8730 3720 8259 16603;16604;16605 13316;13317 13317 2 9606 Homo sapiens 0.08961905304499851 FLIPDYNDEIR Unmodified 1393.6878 0.68778057 1883 A0A994J7I5;O75525-2;O75525;E5RG12;E5RJZ9;H0YAQ3;H0YAQ1 KHDRBS3 KH domain-containing, RNA-binding, signal transduction-associated protein 3 yes no 0 0 0 4 0.816 1 1 1 61.643 61.67 2 1.7438E-08 19019 20230619_1883_Aki_TMTPro18x_K_F4 175.43 145.62 173360 178410 196480 185040 186630 177060 191230 172990 180140 227050 290400 280740 225930 212200 334340 215590 240470 271940 160740 163290 197400 186370 194390 179760 192360 178580 188580 228060 290100 280160 237740 221280 332250 220150 231200 257570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 305610000 8731 1883 8260 16606;16607;16608 13318 13318 1 9606 Homo sapiens 0.00668419043790891 FLIPNASQAESK Unmodified 1303.6772 0.67721588 2805 D0PNI1;P63104;E7EX29;B0AZS6;P63104-2;E7ESK7 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 0 4.5 3.04 1 1 1 1 55.203 55.24 3 3.4192E-11 16482 20230619_1880_Aki_TMTPro18x_K_F1 193.62 173.19 2881900 2332100 2781700 2629000 2178500 2536100 2521400 2522900 2681700 3107600 3127800 2854800 3316300 2764000 3102300 3440300 3199600 3060300 2663900 2137900 2823800 2631000 2321000 2571900 2529600 2594300 2742800 3101000 3194800 2908000 3367800 2889900 3165600 3424400 3059400 2911200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 14992000000 8732 2805 8261 16609;16610;16611;16612 13319;13320;13321 13319 3 9606 Homo sapiens 0.03752436389368086 FLITGADQNR Unmodified 1133.5829 0.58292157 1743 A0A8B0RAT7;Q6P2E9;B7Z7V8 EDC4 Enhancer of mRNA-decapping protein 4 yes no 0 0 0 7.5 0.5 1 1 50.106 50.185 2 8.6192E-10 13607 20230619_1888_Aki_TMTPro18x_K_F8 211.45 174.35 106810 89159 98993 114860 106030 113930 110030 104800 134620 124150 122880 118600 129510 97003 110950 135420 141170 127510 98720 81832 101400 113840 109710 115080 111460 108250 135290 124290 126870 119950 131040 102860 114950 134950 134680 121240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122490000 8733 1743 8262 16613;16614 13322 13322 1 9606 Homo sapiens 0.02147342357875459 FLIVAHDDGR Unmodified 1141.588 0.58800695 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 0 6 1.41 1 1 1 1 1 46.698 46.766 3 1.0664E-19 12469 20230619_1883_Aki_TMTPro18x_K_F4 209.73 142.69 513660 434230 482320 459790 463600 483590 521980 501150 551480 597980 591250 578420 651960 530570 565430 625060 629850 608100 474820 397780 492110 462920 484400 487910 523970 513370 562110 598460 607310 586490 659190 554010 580350 625540 601870 577830 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5825300000 8734 1426 8263 16615;16616;16617;16618;16619 13323;13324;13325;13326;13327 13323 5 9606 Homo sapiens 0.022876462204976633 FLKPYTLEEQK Unmodified 1394.7446 0.74456717 3652 P54709;C9JA36;D3DNF9;P54709-2;C9JXZ1 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes no 0 0 1 1.5 0.5 1 1 54.049 54.063 3 0.01071 16210 20230619_1881_Aki_TMTPro18x_K_F2 69.216 30.582 84794 79886 89982 90023 90341 90128 109700 102180 98278 79303 89583 56185 59846 46942 125170 54803 58542 59842 78521 73194 90985 90137 94177 91450 109120 102960 100310 80667 90935 57878 65026 49198 122070 55455 56666 56780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108400000 8735 3652 8264 16620;16621 13328;13329 13329 2 9606 Homo sapiens 0.06298466600310348 FLLADNLYCK Unmodified 1255.6271 0.62709457 2835 Q6FH24;D3DWY7;P61758-2;P61758 VBP1 Prefoldin subunit 3 yes no 0 0 0 2 0 2 62.261 62.271 2;3 8.1563E-06 19632 20230619_1881_Aki_TMTPro18x_K_F2 128.27 98.966 474370 397900 450160 490320 362670 406230 449290 443030 490840 523350 503330 528050 593820 488170 513630 579870 552880 603740 438520 365030 458210 486560 386060 418080 449480 452420 498490 524670 519960 534450 599260 509880 526250 582400 528970 572990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 336570000 8736 2835 8265 16622;16623 13330;13331 13330 2 9606 Homo sapiens 0.009506104598358434 FLLDHQGELFPSPDPSGL Unmodified 1967.9629 0.9628928 3810 Q07960 ARHGAP1 Rho GTPase-activating protein 1 yes yes 0 0 0 5.5 0.5 1 1 64.294 64.339 3 1.0544E-13 19858 20230619_1885_Aki_TMTPro18x_K_F5 151.59 139.54 87864 64130 77008 81044 77433 89454 97866 102580 111220 87595 85002 91848 102370 86453 99370 107100 97084 115020 81108 58879 79178 80589 81008 90093 97890 103460 111450 89485 89280 92898 103790 90468 101020 107710 93036 109100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168090000 8737 3810 8266 16624;16625 13332;13333 13332 2 9606 Homo sapiens 0.01762986661310606 FLLDTNK Unmodified 849.45962 0.45961853 3892 Q4ZG57;Q14566 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 1 0 1 55.168 55.168 3 0.045351 16489 20230619_1880_Aki_TMTPro18x_K_F1 65.676 5.028 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8738 3892 8267 16626 13334 13334 1 9606 Homo sapiens 0.028867109774296296 FLLESFNNDR Unmodified 1253.6041 0.60405094 283 Q53S54;A0A024R475;Q13618-2;Q13618;B7Z600;Q13618-3 CUL3 Cullin-3 yes no 0 0 0 6 0 1 60.597 60.655 2 0.00048258 18404 20230619_1886_Aki_TMTPro18x_K_F6 123.35 93.545 46038 41178 43443 47572 39864 47980 49332 45915 51883 54673 55952 54395 59559 51004 54422 57226 54626 62756 42575 37744 44325 47530 41976 48442 49275 47301 52890 54777 57367 55121 60422 53066 55460 57711 52320 59518 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56150000 8739 283 8268 16627 13335 13335 1 9606 Homo sapiens -0.01260692333244151 FLLEYIAPMTEK Unmodified 1453.7527 0.75268901 2219 B4DGN8;B2R5M9;Q02809;Q02809-2;B4DHT1 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes no 0 0 0 1.5 0.5 1 1 65.055 65.059 3 0.0032754 20840 20230619_1881_Aki_TMTPro18x_K_F2 72.089 54.358 30626 23020 25180 31276 29450 33623 32473 35029 35936 41085 35111 38402 42101 37379 40486 44297 39224 52746 28263 21149 26136 30927 30357 33844 32676 35838 36428 41106 36401 39061 42678 38972 41153 44860 37635 49959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94231000 8740 2219 8269 16628;16629 13336 13336 1 9606 Homo sapiens 0.04396277525415826 FLLFSSLVTK Unmodified 1153.6747 0.67469669 1037;1668 A0A0G2JN29;Q15155;A0A0G2JP90;A0A7I2V4D7;A0A7I2V686;A0A7I2V4T6;A0A7I2V6B0;J3KN36;Q5JPE7-2;P69849;Q5JPE7;A0A7I2V3P4;A0A7I2V2Z5;Q5JPE7-3 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 2;Nodal modulator 3 no no 0 0 0 7.5 0.5 1 1 65.127 65.15 3 0.00014238 20158 20230619_1887_Aki_TMTPro18x_K_F7 122.26 79.231 59699 48198 59898 66529 57784 73373 63616 62112 87377 76041 71734 74729 75294 71874 73333 91690 80352 89206 55199 44275 60848 65740 60461 73382 64533 64616 87033 76116 74514 75841 76712 75247 75099 91626 76874 84722 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71974000 8741 1037;1668 8270 16630;16631 13337;13338 13337 2 9606 Homo sapiens 0.10400632722371483 FLLHEPIVNK Unmodified 1208.6917 0.69174374 2315 B5MCF9;B2RDF2;O00541;O00541-2 PES1 Pescadillo homolog yes no 0 0 0 1.5 0.5 1 1 53.042 53.059 3 1.0363E-05 15749 20230619_1881_Aki_TMTPro18x_K_F2 151.83 91.066 164650 140120 146930 146540 142330 177460 165770 174950 182590 190420 157650 160030 197870 162510 179100 205780 182390 196260 152150 128350 150690 147970 149050 177050 166340 179230 184240 190690 164730 163950 199750 169900 182780 205480 174570 186450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 368950000 8742 2315 8271 16632;16633 13339;13340 13340 2 9606 Homo sapiens 0.09574553328161528 FLLMLQSVK Unmodified 1077.6256 0.62563801 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;A0A8V8TR41;A4FU51;Q6N069;Q9H6N3;Q8N352 NAA15;NARG1L;NAA16 N-alpha-acetyltransferase 15, NatA auxiliary subunit;N-alpha-acetyltransferase 16, NatA auxiliary subunit yes no 0 0 0 7 0 1 64.573 64.602 3 0.0038607 19893 20230619_1887_Aki_TMTPro18x_K_F7 78.516 50.117 44932 36769 42976 39046 42429 56969 42927 44298 68523 22299 26327 28336 35240 26616 27298 30391 31438 26194 41533 33688 43795 39497 44267 55935 44023 45537 66523 24009 29388 28463 35308 27714 28140 30242 30003 24943 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23182000 8743 2297 8272 16634 13341 13341 1 9606 Homo sapiens 0.08993021161791148 FLLNNDK Unmodified 862.45487 0.45486751 1171 O43747-2;O43747;B3KXW5;A0A140VJE7;Q8IY97;B4DS96;B4DDL1 AP1G1 AP-1 complex subunit gamma-1 yes no 0 0 0 4.5 3.5 1 1 52.408 52.446 2 0.00011524 14563 20230619_1888_Aki_TMTPro18x_K_F8 141.78 86.066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8744 1171 8273 16635;16636 13342;13343 13343 2 9606 Homo sapiens 0.018138268346547193 FLLQVFTK Unmodified 994.58515 0.5851534 4366 Q96IR7 HPDL 4-hydroxyphenylpyruvate dioxygenase-like protein yes yes 0 0 0 6 0 1 64.243 64.29 3 0.036035 20037 20230619_1886_Aki_TMTPro18x_K_F6 60.973 30.403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8745 4366 8274 16637 13344 13344 1 9606 Homo sapiens 0.0876442283366714 FLLSESGSGK Unmodified 1023.5237 0.52367535 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;B3KRA9 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 7.5 0.5 1 1 53.323 53.394 3 6.9318E-05 15087 20230619_1887_Aki_TMTPro18x_K_F7 135.55 96.527 50744 45844 57115 49438 62797 69800 71184 70600 78564 51435 52252 54280 60038 45198 58684 62982 54263 53520 47001 41992 57541 49943 64985 69058 71493 71532 78494 53135 55221 54705 60931 47872 59478 62467 51956 50936 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 479320000 8746 43 8275 16638;16639 13345 13345 1 9606 Homo sapiens 0.012854463437292907 FLLSLPEHR Unmodified 1110.6186 0.61857879 3908 Q15008;Q15008-4;C9J7B7 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 1.5 0.5 1 1 53.646 53.674 3 2.2938E-12 16015 20230619_1881_Aki_TMTPro18x_K_F2 191.17 162.78 59563 41765 49164 55012 51041 58949 53841 53864 56121 66164 63382 55666 63292 52463 50054 72424 61317 72119 54947 38368 50870 54506 52988 59185 54215 55705 57393 65875 64617 56920 63966 55300 51884 72365 58633 68463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 461340000 8747 3908 8276 16640;16641 13346;13347 13347 2 9606 Homo sapiens 0.0676942460556802 FLLVGQTMPTLLDEDLTK Unmodified 2033.0755 0.075479714 1150 A0A0U1RQI9;Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 yes no 0 0 0 8 0 1 65.766 65.785 3 0.029441 20278 20230619_1888_Aki_TMTPro18x_K_F8 46.543 35.599 8787.1 8538.6 11657 11045 9651.7 11184 11919 10012 11092 10825 12557 14429 13951 10609 11453 12509 13069 15347 8156.6 7833.1 11570 10951 10236 11271 11863 10342 11403 11005 12888 14349 14067 11177 11786 12695 12504 14538 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9198300 8748 1150 8277 16642 13348 13348 1 9606 Homo sapiens 0.10026499343166506 FLLYDQTK Unmodified 1026.5386 0.53859714 2466 Q9Y2S7;B4DEM9 POLDIP2 Polymerase delta-interacting protein 2 yes no 0 0 0 4.5 3.5 1 1 57.838 57.864 2;3 0.018287 17655 20230619_1880_Aki_TMTPro18x_K_F1 68.95 44.995 83821 77811 82173 91047 70463 96706 99881 93885 96057 102510 104010 108530 112310 102360 109630 130590 116800 135390 77560 71320 83528 90944 75023 97259 98888 96365 98417 103310 106760 109740 114280 107260 112050 130980 111810 128470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59370000 8749 2466 8278 16643;16644 13349;13350 13349 2 9606 Homo sapiens 0.026389382116803972 FLMANGQLVK Unmodified 1119.6111 0.61105057 1080;2533 A0A0S2Z3X8;P31150;B4DHX4;B4DH24;G5E9U5;Q6IAT1;B4DLV7;P50395;Q5SX86;V9GYF8;Q5SX90;V9GYJ7 GDI1;GDI2 Rab GDP dissociation inhibitor alpha;Rab GDP dissociation inhibitor beta no no 0 0 0 3.5 0.5 1 1 58.139 58.156 2 2.7529E-09 17573 20230619_1883_Aki_TMTPro18x_K_F4 222.55 138.75 160470 159650 173740 150970 144940 199150 168130 161910 199440 89148 80803 61260 69585 51532 147760 63725 69547 58653 148690 146030 174850 153950 153760 196850 169120 166040 196310 93382 88037 63218 75019 54182 144090 63834 67223 55802 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51729000 8750 1080;2533 8279 16645;16646 13351;13352 13352 2 9606 Homo sapiens 0.056029490136324966 FLNAENAQK Unmodified 1033.5193 0.51925868 1241 A0A140VK94;F6WQW2;P43487-2;P43487;C9JXG8;D3DX26;C9JGV6;B3KUP2 RANBP1 Ran-specific GTPase-activating protein yes no 0 0 0 7 0.816 2 2 2 47.072 47.144 2;3 2.1875E-08 12232 20230619_1887_Aki_TMTPro18x_K_F7 210.01 134.27 1468100 1076400 1149700 1180300 1260100 1306000 1281600 1248500 1607600 1657500 1806200 1701100 1815700 1515300 1463900 1917700 1960400 1694600 1354200 986900 1196000 1185600 1301400 1310500 1301200 1290300 1627500 1654700 1842900 1719300 1836300 1590200 1524600 1906900 1869100 1612900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3197699999.9999995 8751 1241 8280 16647;16648;16649;16650;16651;16652 13353;13354;13355 13354 3 9606 Homo sapiens 0.0038398192079966975 FLNDTSLPHSCFR Unmodified 1592.7406 0.7405612 2174 E9PDF6;B0I1S9;O43795-2;O43795;A0A0U1RRI3 MYO1B Unconventional myosin-Ib yes no 0 0 0 1 0 1 50.804 50.804 3 1.5585E-15 14681 20230619_1880_Aki_TMTPro18x_K_F1 164.68 127.34 35629 30175 33864 40213 35810 41889 38531 41578 41948 34938 32501 28042 35208 31560 32771 34269 32548 37699 32938 27703 34618 39795 37137 42209 38805 42314 42158 35471 33884 28924 35745 32592 33365 34582 31179 35751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222950000 8752 2174 8281 16653 13356 13356 1 9606 Homo sapiens -0.032099461650432204 FLNDTTKPVGLLLSER Unmodified 1801.9938 0.993799 4645 Q9P287-2;B4E318;B4DUS0;Q9P287-4;Q9P287-3;Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes no 0 0 1 3 0 1 61.571 61.601 3 3.9288E-15 19059 20230619_1882_Aki_TMTPro18x_K_F3 180.32 160.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8753 4645 8282 16654 13357 13357 1 9606 Homo sapiens 0.12488184766243648 FLNEFFLNVK Unmodified 1269.6758 0.67575932 2568 B4DPV7;P49589-3;A8K067;B4DKY1;A0A024RCG3;P49589-2;P49589;A8MVQ3;B4DI19;Q53HG6 CARS Cysteine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 57.592 57.654 3 0.027531 16894 20230619_1887_Aki_TMTPro18x_K_F7 57.348 27.581 303120 348490 369900 280570 426060 535580 378860 379280 769650 135920 109740 86949 105040 79740 239910 117890 124500 104610 281510 318270 370580 292680 438020 518690 396250 391550 733590 150460 143420 90541 113960 84591 234530 117500 120100 99575 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219050000 8754 2568 8283 16655;16656 13358 13358 1 9606 Homo sapiens 0.05170847091289943 FLNRHDLDLICR Unmodified 1570.8038 0.80383016 3705 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;B4DJ75;B7ZB67 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes no 0 0 1 2 0 1 50.226 50.278 4 1.1975E-06 14566 20230619_1881_Aki_TMTPro18x_K_F2 151.7 127.71 39596 39531 41619 40242 41653 35906 43122 46287 36697 39457 42246 34921 46439 36031 45148 47706 47998 36738 36679 36181 42087 40570 43191 36925 43229 46379 37994 40081 43233 35754 47177 37752 46098 47137 45819 35052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185970000 8755 3705 8284 16657 13359 13359 1 9606 Homo sapiens 0.04126039342850163 FLNVPMFR Unmodified 1022.5372 0.53715735 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;A0A7I2YQX3;C9JKM9 XPO1 Exportin-1 yes no 0 0 0 6 0 1 62.414 62.466 2 0.013791 19204 20230619_1886_Aki_TMTPro18x_K_F6 87.284 73.289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8756 3228 8285 16658 13360 13360 1 9606 Homo sapiens 0.02679025641964472 FLNWATPNL Unmodified 1074.5498 0.54983053 2617 C9JPE1;B4DWZ5;O43772 SLC25A20 Mitochondrial carnitine/acylcarnitine carrier protein yes no 0 0 0 3 0 1 66.124 66.16 2 0.0023444 21014 20230619_1882_Aki_TMTPro18x_K_F3 107.32 93.323 15132 14136 15714 13813 16760 18050 19073 20352 20561 11843 13364 11023 11671 13228 15630 13872 10885 14719 14009 12936 15921 14050 17381 17989 19142 20394 20542 12414 13971 11325 12174 13595 15555 13984 10487 13957 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13390000 8757 2617 8286 16659 13361 13361 1 9606 Homo sapiens 0.015537603058419336 FLPAVSDENSK Unmodified 1205.5928 0.59281755 3589 P46087;P46087-4;P46087-2;P46087-3;F5GWB7;F5H709;F5H5X6;F5H359;F5H8G6 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 5 0 1 53.527 53.597 2 4.4146E-07 15299 20230619_1885_Aki_TMTPro18x_K_F5 144.77 104.34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8758 3589 8287 16660 13362 13362 1 9606 Homo sapiens -0.0017551442738295009 FLPDEAR Unmodified 846.42357 0.42356738 345 A0A024R5K6;O95298-2;O95298;E9PRJ5;E9PRQ4;Q8NI46;A0A087WY27;E9PM14;A0A087WUM3;O95298-3;E9PQ53 NDUFC2;NDUFC2-KCTD14;KCTD14 NADH dehydrogenase [ubiquinone] 1 subunit C2;NADH dehydrogenase [ubiquinone] 1 subunit C2, isoform 2 yes no 0 0 0 3 0 1 46.198 46.276 2 0.012872 12432 20230619_1882_Aki_TMTPro18x_K_F3 114.72 39.41 218520 210180 214840 237510 289480 314290 267260 273850 320970 244450 276060 272170 297360 234710 247430 300610 313040 309340 202250 192560 219810 238620 294210 311100 272380 281720 321970 249640 286210 273950 300400 246920 256390 301340 298860 293730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164380000 8759 345 8288 16661 13363 13363 1 9606 Homo sapiens -0.005787461994259502 FLPEALFLHR Unmodified 1241.6921 0.69207809 3088 H7C0X4;Q92685;B4DS50;C9J7S5;Q92685-2 ALG3 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase yes no 0 0 0 3 0 1 61.832 61.862 3 3.3319E-07 19184 20230619_1882_Aki_TMTPro18x_K_F3 177.06 127.7 20150 15945 18310 19979 15054 12607 18413 19061 17420 15159 15397 14081 18375 14040 15052 21881 17115 13382 18615 14633 18708 19758 15951 13469 18351 18931 17719 15491 16015 14370 18494 14893 15515 21368 16330 12814 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69608000 8760 3088 8289 16662 13364 13364 1 9606 Homo sapiens 0.08089973048026877 FLPFSFEHIR Unmodified 1291.6713 0.67134264 1862 Q93050-3;Q93050;Q93050-1;A0A994J3Z0;K7EN36;K7ENA1;Q5CZH6;Q53ET5;Q53X12;A0A994J3Z9;A0A994J3Z4;B7Z641;B7Z2A9;A0A994J473;B7Z2J9;F5H1T6;Q6AHY6 ATP6V0A1;DKFZp686N0561;DKFZp781J1951 V-type proton ATPase 116 kDa subunit a isoform 1;V-type proton ATPase subunit a yes no 0 0 0 4 0 1 60.521 60.523 3 3.6615E-10 18563 20230619_1883_Aki_TMTPro18x_K_F4 207.83 139.17 14329 11675 13483 18367 12502 15925 16198 15654 17245 14480 12148 11061 14176 12642 13663 15445 12954 14515 13243 10741 13785 17950 13179 16269 16146 15989 17304 14601 12790 11447 14385 13138 13874 15419 12412 13791 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11421000 8761 1862 8290 16663 13365 13365 1 9606 Homo sapiens 0.0371738266835564 FLPGMAIGYSSSK Unmodified 1356.6748 0.67477304 3479 P19623;K7EQ47 SRM Spermidine synthase yes no 0 0 0 4.5 0.5 1 1 61.619 61.645 3 0.070769 18645 20230619_1885_Aki_TMTPro18x_K_F5 40.373 18.5 149150 128610 147270 157890 150380 177730 168610 167120 174830 155380 162670 142610 139130 106100 196230 116660 121510 112400 137940 117970 149890 157310 156510 177940 169160 171150 177200 157270 166440 144100 145280 111270 193970 117110 116920 106840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109170000 8762 3479 8291 16664;16665 13366 13366 1 9606 Homo sapiens 0.010702646600748267 FLPLFDR Unmodified 906.49634 0.49633839 1453;4826 A0A384N6A4;P61604;Q9UNM1;B8ZZL8;S4R3N1 HSPE1;EPFP1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial no no 0 0 0 2 0.816 1 1 1 62.701 62.714 2 0.0040075 19582 20230619_1880_Aki_TMTPro18x_K_F1 151.17 83.192 8925100 7436800 7734600 9870200 7917800 10190000 8677800 9991500 9913200 10488000 9495600 10345000 11260000 11231000 6870800 16404000 7522800 12869000 8244600 6827800 7973200 9767800 8246100 10270000 8748100 10232000 10021000 10569000 9839400 10550000 11238000 11816000 7156300 16174000 7228500 12241000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 17833000000 8763 1453;4826 8292 16666;16667;16668 13367;13368;13369 13367 3 9606 Homo sapiens 0.03935007593986484 FLPLTQV Unmodified 816.47454 0.47454032 4431 Q9BTE1 DCTN5 Dynactin subunit 5 yes yes 0 0 0 1.5 0.5 1 1 64.777 64.777 2 0.015271 20709 20230619_1881_Aki_TMTPro18x_K_F2 99.511 91.181 34887 29088 28445 36075 32447 36033 31116 32826 33731 30043 30580 21639 27036 21301 30916 25790 30840 26645 32213 26687 29533 35845 33371 36368 31541 33684 34086 30264 31318 22369 27879 22242 31335 25909 29479 25314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74589000 8764 4431 8293 16669;16670 13370;13371 13371 2 9606 Homo sapiens 0.058962028454288884 FLPNAPK Unmodified 785.44357 0.44357454 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 2.5 0.5 1 1 50.192 50.256 2 0.044438 14206 20230619_1882_Aki_TMTPro18x_K_F3 88.734 52.147 157110 131300 156640 163610 175040 190510 202940 188850 222270 193480 194260 196840 216110 166280 191580 210580 233410 203600 145290 120470 159500 162940 181070 190560 203530 193180 224180 195430 201610 198670 218650 174950 197640 210470 222720 193560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 320460000 8765 1661 8294 16671;16672 13372 13372 1 9606 Homo sapiens 0.04227049531186822 FLPPVLLK Unmodified 925.60008 0.60007518 1731 A0A804HJA4;J3KN16;Q5VYK3;R4GMY1;R4GMY3 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 6 0 1 63.517 63.566 3 0.013009 19715 20230619_1886_Aki_TMTPro18x_K_F6 80.18 39.192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8766 1731 8295 16673 13373 13373 1 9606 Homo sapiens 0.13429914701657708 FLPRPIR Unmodified 897.55486 0.55485632 3821 Q6AWA4;Q12789;Q6AHZ7;Q12789-3 DKFZp686O0870;GTF3C1;DKFZp686A111 General transcription factor 3C polypeptide 1 yes no 0 0 1 8 0 1 42.985 42.995 3 0.030524 10697 20230619_1888_Aki_TMTPro18x_K_F8 72.823 41.534 53084 50548 50466 47191 47001 51861 52537 54176 53799 41459 46076 42118 44325 34532 44380 40047 39414 30851 49115 46239 51409 48053 49242 52174 52710 54841 54385 42608 47544 42493 45268 36159 44827 39667 37700 29431 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18238000 8767 3821 8296 16674 13374 13374 1 9606 Homo sapiens 0.10198108959127694 FLPRPVFTK Unmodified 1103.6492 0.64915064 1487 P28161;A0A384P5E9;Q0D2I8;E9PHN7;A0A0A0MR85;X5DNN9 GSTM2;GSTM4;GSTM1 Glutathione S-transferase Mu 2 yes no 0 0 1 7.5 0.5 1 1 53.389 53.46 3 0.038524 15019 20230619_1888_Aki_TMTPro18x_K_F8 56.202 33.863 290800 289930 296590 294740 303200 276320 308970 323660 270590 241410 283480 246670 250790 213450 310370 293490 312390 228690 269310 265350 300800 297300 313930 282210 310200 325200 278240 248450 288760 249410 259850 225390 314550 290110 298290 218210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 350960000 8768 1487 8297 16675;16676 13375 13375 1 9606 Homo sapiens 0.10147202990583537 FLPSELRDEH Unmodified 1241.6041 0.60405094 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 1 2.5 0.5 1 1 47.193 47.269 3 2.0219E-16 12889 20230619_1882_Aki_TMTPro18x_K_F3 188.49 156.48 57970 38738 51915 69089 61904 56998 62260 61978 76995 59703 73501 80019 73508 54443 66021 73363 69728 88188 53496 35730 53479 67054 63464 58657 63204 62959 77396 61084 75613 79445 74612 58048 67520 74217 66807 83537 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59094000 8769 1292 8298 16677;16678 13376;13377 13377 2 9606 Homo sapiens -0.007086923332508377 FLQDYFDGNLK Unmodified 1358.6507 0.65066678 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DJ98 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 7.5 0.5 1 1 63.238 63.266 2 8.0058E-12 19200 20230619_1888_Aki_TMTPro18x_K_F8 233.84 172.93 562420 467650 517010 588150 482760 594200 582460 607550 658980 759900 777840 781840 520600 735420 519090 1204700 490450 1017000 519760 429110 528980 584120 507480 600570 584120 623780 671880 760310 781130 792160 541370 783260 530500 1190300 473180 966000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1866999999.9999998 8770 2389 8299 16679;16680 13378;13379 13379 2 9606 Homo sapiens -0.014312525019477107 FLQDYFDGNLKR Unmodified 1514.7518 0.75177781 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DJ98 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 1 2 0 1 59.837 59.849 3 0.00063176 18627 20230619_1881_Aki_TMTPro18x_K_F2 93.348 61.286 51532 75835 84247 54683 97527 58364 88528 69229 55800 46471 50915 45099 50700 34582 158180 32912 36603 50856 48138 69171 82826 57191 99425 59218 88772 69416 58516 48120 52682 45497 56670 36008 151550 34503 36296 48061 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121880000 8771 2389 8300 16681 13380 13380 1 9606 Homo sapiens 0.014991992007480803 FLQEFYQDDELGKK Unmodified 1758.8465 0.84646606 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;P33993-2;A0A0S2Z441 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 1 5.5 1.12 1 1 1 1 61.239 61.275 3 5.7576E-09 18657 20230619_1886_Aki_TMTPro18x_K_F6 162.29 128.61 467810 411040 453030 466080 397260 481480 484300 441830 485910 596580 560360 542880 638810 528480 542220 644370 561490 620460 432660 376720 460730 466500 419650 484860 483440 458390 498530 592890 574740 553130 644720 551870 554720 644050 537450 589350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 398880000 8772 1091 8301 16682;16683;16684;16685 13381 13381 1 9606 Homo sapiens -0.002603318386036335 FLQEHLAPK Unmodified 1081.592 0.59202969 961 A0A384MR53;A0A0A0MT83;A0A2L0RI93;A0A2L0RI88;A0A2L0RI76;P26440;A0A2L0RIE3;A0A0S2Z3Z7;A0A2L0RIB1;A0A087WVD3;H0YN10 IVD Isovaleryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 8 0 1 47.53 47.588 3 0.0044341 12514 20230619_1888_Aki_TMTPro18x_K_F8 74.841 29.473 298940 246600 263240 301830 308740 351670 350510 343290 361340 339420 357540 362950 397640 307530 355400 421580 410960 400520 276160 226230 271350 300910 318320 351600 351260 351170 367350 343940 368840 365700 402410 325180 365570 420420 392590 380670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128320000 8773 961 8302 16686 13382 13382 1 9606 Homo sapiens 0.054497357142281544 FLQFVTGTSK Unmodified 1126.6023 0.60226003 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;H0Y659;Q5H935;Q53FW4;Q3B7K0 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 5.5 0.5 1 1 62.325 62.374 3 0.024676 19189 20230619_1886_Aki_TMTPro18x_K_F6 59.177 34.842 184900 133510 150570 174220 149650 150150 172190 182670 176920 190640 215780 195170 189180 187800 191570 259490 231570 226830 170590 122620 155920 172290 156060 154440 172540 184590 181520 192310 218290 197940 194260 197570 197360 257580 221140 215810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193900000 8774 594 8303 16687;16688 13383 13383 1 9606 Homo sapiens 0.04402298648801661 FLQNLVPHR Unmodified 1122.6298 0.62981218 1634 F8W7R3;B3KNW8;A0A6Q8PGF4;B7ZMF2;A0A6Q8PH09;Q9NVI1-2;Q9NVI1-1;Q9NVI1;H3BP78;A0A8Q3SIZ6;A0A8Q3SIW9 FANCI Fanconi anemia group I protein yes no 0 0 0 5.5 0.5 1 1 52.776 52.85 3 0.00041647 15054 20230619_1885_Aki_TMTPro18x_K_F5 95.815 77.951 26995 23404 26282 27291 33451 30257 29222 30307 35042 31847 31563 33416 35436 27978 35580 38349 34302 30992 24966 21456 26861 27289 34022 30395 29893 30995 35242 32154 32737 33675 36036 29584 36122 37954 32810 29526 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19418000 8775 1634 8304 16689;16690 13384 13384 1 9606 Homo sapiens 0.07340246699709496 FLQPHQR Unmodified 924.49298 0.49298435 2585 E7EW05;B4DT66;Q9NVU7-2;Q9NVU7 SDAD1 Protein SDA1 homolog yes no 0 0 0 2.5 0.5 1 1 33.862 33.923 3 0.001822 7275 20230619_1881_Aki_TMTPro18x_K_F2 132.94 103.6 28135 17566 25965 28120 33574 27809 31301 35997 37464 32856 39406 39750 39312 32819 35845 35048 40009 35270 25961 16183 26672 27524 34149 28340 31894 36110 37879 33575 40335 39808 39956 34196 36733 35206 38208 33515 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47158000 8776 2585 8305 16691;16692 13385 13385 1 9606 Homo sapiens 0.02771757539983355 FLREPVVTPQDLEGPGR Unmodified 1909.0058 0.005760665 2130 A8K940;Q66K74-2;Q66K74 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 1 6.5 0.5 1 1 54.565 54.636 3 0.00031495 15617 20230619_1887_Aki_TMTPro18x_K_F7 82.774 62.765 44260 45630 50547 57513 55028 57129 56085 47705 61308 67942 70317 63356 66166 57785 64599 69626 61789 72766 41041 41841 50931 57083 56784 57603 56647 49967 62556 67446 71497 64351 67583 60425 65595 69939 59223 69040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 224300000 8777 2130 8306 16693;16694 13386 13386 1 9606 Homo sapiens 0.08761801509399447 FLRPHYGK Unmodified 1016.5556 0.55558461 3840 Q59EG8;Q13200;B4DM22;Q9NSM5;H7C2Q3;C9JPC0 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 1 6 0.816 1 1 1 38.893 38.972 4 0.01172 9084 20230619_1886_Aki_TMTPro18x_K_F6 83.313 67.449 735090 602380 686470 811370 815190 912670 903720 822670 974980 891880 861400 790590 924960 750510 808490 1021300 932650 811660 679350 553170 704200 803180 839080 912970 907880 848720 984750 894900 891440 806430 936400 789750 832170 1009600 890320 773590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 312110000 8778 3840 8307 16695;16696;16697 13387;13388 13387 2 9606 Homo sapiens 0.04796903608178127 FLSDLRR Unmodified 905.5083 0.50830006 49 G5EA31;A0A024QZM6;P53992;B4DSN3;A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4 SEC24C;RNF213 Protein transport protein Sec24C;E3 ubiquitin-protein ligase RNF213 yes no 0 0 1 3.5 0.5 1 1 44.596 44.655 3 0.0052158 11676 20230619_1882_Aki_TMTPro18x_K_F3 110.63 32.018 90246 78655 85566 84392 105640 112040 100430 105320 125200 44607 46039 49598 50025 43565 65087 47644 53984 44455 83446 72053 87600 85161 108010 111060 102280 106410 122750 48635 51206 49964 51685 45339 65204 47701 51693 42292 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24430000 8779 49 8308 16698;16699 13389 13389 1 9606 Homo sapiens 0.051766243371730525 FLSHLVDGVK Unmodified 1113.6182 0.61824444 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8 XPO7 Exportin-7 yes no 0 0 0 2 0 1 57.268 57.285 3 4.6938E-07 17512 20230619_1881_Aki_TMTPro18x_K_F2 139.86 83.295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8780 2083 8309 16700 13390 13390 1 9606 Homo sapiens 0.06598004885699993 FLSLPEVR Unmodified 959.54402 0.54401687 606;2430 H7C0X5;O75225;A0A024RA40;Q9H3G5;Q9NZ90;B3KW79 CPVL Probable serine carboxypeptidase CPVL no no 0 0 0 1.5 0.5 1 1 59.05 59.057 2 0.0087229 18137 20230619_1880_Aki_TMTPro18x_K_F1 103.83 66.812 143050 124260 132080 169440 193560 216290 181780 186430 213850 178390 169070 160380 183640 150410 166000 190970 179060 193990 132240 114100 136260 167900 195950 214420 184880 192260 214250 180270 176150 163380 186110 157690 169970 191340 171300 184160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 203360000 8781 606;2430 8310 16701;16702 13391;13392 13391 2 9606 Homo sapiens 0.06262661794175983 FLSLYGDQIDMHR Oxidation (M) 1609.7559 0.75587691 4332 Q96CN7;D6RGE2 ISOC1 Isochorismatase domain-containing protein 1 yes no 0 1 0 6.5 0.5 1 1 55.534 55.602 3 6.5065E-09 16000 20230619_1887_Aki_TMTPro18x_K_F7 167.89 140.56 28950 24642 26752 30440 31620 44372 32914 33658 46499 36506 39537 46442 41701 37410 39894 52011 45456 54728 26759 22606 27468 30432 32599 43537 33522 35196 46294 37074 41034 46394 42432 39647 40978 52141 43503 51918 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112370000 8782 4332 8311 16703;16704 13393 13393 2735 1 9606 Homo sapiens -0.02461079367867569 FLSLYGDQIDMHR Unmodified 1593.761 0.76096229 4332 Q96CN7;D6RGE2 ISOC1 Isochorismatase domain-containing protein 1 yes no 0 0 0 7.5 0.5 1 1 58.265 58.315 3 5.533E-17 17083 20230619_1888_Aki_TMTPro18x_K_F8 217.91 206.04 77001 70346 74223 90275 81824 108290 98502 88189 113730 94335 95697 98499 107780 95144 109390 113710 106550 115060 71232 64541 75880 89718 84995 107620 98765 91685 114230 95213 99613 99719 109720 99225 111080 114040 102030 109240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 375340000 8783 4332 8311 16705;16706 13394;13395 13395 2 9606 Homo sapiens -0.012167755052587381 FLSLYGDQIDMHRK Unmodified 1721.8559 0.85592531 4332 Q96CN7;D6RGE2 ISOC1 Isochorismatase domain-containing protein 1 yes no 0 0 1 2 0 1 54.037 54.065 4 1.4286E-13 16167 20230619_1881_Aki_TMTPro18x_K_F2 194.12 172.89 75104 56989 75787 77282 74319 113940 86278 91923 117220 106420 105140 114620 126460 115630 102030 150540 155940 143200 69420 52354 76963 76828 77937 111820 87261 95768 117190 107100 109410 116080 127370 121040 107420 150150 148590 136140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71752000 8784 4332 8312 16707 13396 13396 1 9606 Homo sapiens 0.023871579659271447 FLSPEFIPR Unmodified 1104.5968 0.59678072 2073 A8K5D5;P49406;A0A0A0MRF4 MRPL19 39S ribosomal protein L19, mitochondrial yes no 0 0 0 1.5 0.5 1 1 61.238 61.244 2 0.0019467 19134 20230619_1881_Aki_TMTPro18x_K_F2 111.04 81.228 292790 264440 293630 352740 309780 376530 381200 362860 428360 382910 413420 350690 372280 330970 378020 399560 361730 401880 270910 242730 298920 349150 322670 378480 381570 372240 432890 385050 422690 357100 381580 345680 383540 400500 346540 381540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 414580000 8785 2073 8313 16708;16709 13397 13397 1 9606 Homo sapiens 0.04866619856966281 FLSPQDTFEALKR Unmodified 1550.8093 0.80929269 4096 Q69YJ7;Q9NTZ6;B4DRP9 DKFZp667H197;RBM12 RNA-binding protein 12 yes no 0 0 1 2.5 0.5 1 1 60.248 60.268 3 1.1699E-15 18524 20230619_1882_Aki_TMTPro18x_K_F3 170.95 135.36 112640 111320 136730 120690 140600 144360 151360 130090 115350 117210 106850 77545 92765 63824 153020 59225 66839 60340 104480 101940 136850 121500 145750 143930 150880 133570 119280 117920 109390 80051 97774 66163 149260 59974 64739 57323 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 131290000 8786 4096 8314 16710;16711 13398;13399 13399 2 9606 Homo sapiens 0.05592041406316639 FLSPVVPNYDNVHPNYHK Unmodified 2139.0538 0.05377349 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B0QY90;B3KNG0;Q7Z5X3;Q8N7H0 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 0 2 0 1 52.298 52.336 4 4.1308E-10 15444 20230619_1881_Aki_TMTPro18x_K_F2 142.91 127.27 124640 93220 117200 124210 117400 123370 149110 134600 144690 178630 158930 175720 169150 165920 153690 193780 166660 177070 115130 85626 119730 122890 122690 125090 148350 137940 148410 178020 162970 178110 171730 172820 157500 193250 159400 168320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 318510000 8787 2176 8315 16712 13400 13400 1 9606 Homo sapiens 0.02980875429511798 FLSQIESDR Unmodified 1093.5404 0.54038805 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J4Q0;A0A994J428;A8K4Q9;B3KT70;Q2TB90;B4E0J9 HK1;HKDC1 Hexokinase-1;Hexokinase;Putative hexokinase HKDC1 yes no 0 0 0 4 0.816 1 1 1 53.076 53.122 2 5.4379E-11 15561 20230619_1882_Aki_TMTPro18x_K_F3 176.78 99.938 483110 382740 538650 576280 607760 680100 803970 806690 845740 695080 710650 749660 888110 689280 655060 845210 758220 748080 447060 351970 544090 567370 630800 682350 800200 812150 853470 710200 743380 756800 889350 721350 676940 840920 724390 711600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 459960000 8788 43 8316 16713;16714;16715 13401;13402 13401 2 9606 Homo sapiens -0.0026405277033063612 FLSQPFQVAEVFTGHMGK Unmodified 2022.0033 0.003317824 3391 Q0QEN7;V9HW31;P06576 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 4 0 1 63.77 63.778 3 8.1186E-39 19915 20230619_1883_Aki_TMTPro18x_K_F4 258.38 225.08 96144 85513 98152 107730 78890 92497 114020 112490 115340 123840 119510 117790 129780 112050 125500 106030 129920 137300 88965 78449 99329 106790 84414 95138 112990 113860 117640 124320 122890 119600 131930 115520 127830 108470 124310 130050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78268000 8789 3391 8317 16716 13403 13403 1 9606 Homo sapiens 0.033196297800259345 FLSSAAAVSK Unmodified 979.53385 0.53384611 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 3 0 1 52.197 52.263 2 3.5007E-05 15149 20230619_1882_Aki_TMTPro18x_K_F3 178.94 116.28 152000 133860 133720 126480 184380 203360 172190 171090 217470 97993 87507 76643 81941 65094 136440 98456 99460 67595 140480 122490 138090 129440 187300 199110 175580 174980 213470 102560 95704 78507 86408 69282 135520 96809 95300 64646 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69974000 8790 2980 8318 16717 13404 13404 1 9606 Homo sapiens 0.04326054068940266 FLTAVNLEHPEMLEK Unmodified 1769.9022 0.9022068 3962 Q2NLC8;Q6FII1;Q9Y2Q3-4;Q9Y2Q3-3;Q9Y2Q3;Q9Y2Q3-2;C9JNT3;E9PFN5 GSTK1;LOC51064 Glutathione S-transferase kappa 1 yes no 0 0 0 7 0 1 61.153 61.192 3 3.0846E-08 18310 20230619_1887_Aki_TMTPro18x_K_F7 140.96 113.32 74276 65764 73463 75914 67494 101170 100730 93201 108210 83309 84391 92477 101570 85083 96153 114090 103850 113620 68710 60281 74679 76176 71668 100130 99819 95503 108780 85061 88539 93265 102870 89545 98397 114100 99351 107880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178620000 8791 3962 8319 16718 13405 13405 1 9606 Homo sapiens 0.048051780773676 FLTFAER Unmodified 882.45995 0.45995289 3315 O75691 UTP20 Small subunit processome component 20 homolog yes yes 0 0 0 1 0 1 56.173 56.173 2 0.064081 16908 20230619_1880_Aki_TMTPro18x_K_F1 74.255 63.841 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8792 3315 8320 16719 13406 13406 1 9606 Homo sapiens 0.0140213069728361 FLTGYEVK Unmodified 955.50148 0.50148335 4260 Q8NI60;B4DED1;Q5T7A2;B4DVB7;Q8NI60-3;B4DU83;B4DN23;Q8NI60-2;Q8NI60-4 ADCK3 Atypical kinase ADCK3, mitochondrial yes no 0 0 0 1 0 1 56.585 56.585 2 0.069768 17078 20230619_1880_Aki_TMTPro18x_K_F1 62.582 29.032 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8793 4260 8321 16720 13407 13407 1 9606 Homo sapiens 0.021952666659558417 FLTPIYHPNIDSAGR Unmodified 1699.8682 0.86820455 562 A0A8V8TNE2;A0A024R9A9;Q9NPD8;A0A8V8TN93;A0A8V8TQ15 UBE2T Ubiquitin-conjugating enzyme E2 T yes no 0 0 0 1.5 0.5 1 1 53.457 53.472 3 3.066E-33 15950 20230619_1881_Aki_TMTPro18x_K_F2 248.61 219.9 95577 73408 90886 97551 79578 88539 94747 93551 93149 103550 93453 71281 100280 77095 97389 96815 78224 75630 88308 67419 92583 96412 83952 90324 94641 95502 95079 103110 96042 74102 101900 80418 98022 95805 75012 72068 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 246020000 8794 562 8322 16721;16722 13408 13408 1 9606 Homo sapiens 0.046265177006489466 FLTVMMK Oxidation (M) 884.44998 0.44998183 3065;2214 H3BN98;I3L246;H3BV27;H3BT37;I3L303;I3L3P7;B2R4W8;P62244;A8K7H3 RPS15A;hCG_1994130 40S ribosomal protein S15a no no 0 1 0 3.8 0.748 2 2 1 57.632 57.658 2;3 0.013765 17045 20230619_1883_Aki_TMTPro18x_K_F4 80.18 56.623 722820 645830 647560 659310 781450 779880 760180 750790 825520 397900 414280 345510 341450 296900 606060 381020 368370 320390 668180 591320 666050 666730 800060 779260 769460 759610 819580 420170 441380 352060 363390 312240 597260 378920 354420 305130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 260730000 8795 3065;2214 8323 16723;16724;16725;16726;16727 13409;13410;13411 13409 1380;1381 3 9606 Homo sapiens 0.0031348337605550114 FLTVMMK Unmodified 868.45507 0.4550672 3065;2214 H3BN98;I3L246;H3BV27;H3BT37;I3L303;I3L3P7;B2R4W8;P62244;A8K7H3 RPS15A;hCG_1994130 40S ribosomal protein S15a no no 0 0 0 5 0 1 62.227 62.275 3 0.0044637 18923 20230619_1885_Aki_TMTPro18x_K_F5 99.919 82.993 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8796 3065;2214 8323 16728 13412 13412 1 9606 Homo sapiens 0.015577872386643321 FLVECFR Unmodified 969.47422 0.47422274 526 A0A024R8M0;Q14344;Q14344-2;B4DWV9 GNA13 Guanine nucleotide-binding protein subunit alpha-13 yes no 0 0 0 1.5 0.5 1 1 57.529 57.537 2 0.0077762 17626 20230619_1881_Aki_TMTPro18x_K_F2 122.54 88.689 127540 109940 125120 127610 104480 128320 123530 122060 142590 133000 117110 137790 146920 120220 131610 162490 149490 156940 117950 100790 127020 127470 110800 129550 124080 125460 143220 134000 122810 139040 148270 126840 135260 162200 142910 149090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92958000 8797 526 8324 16729;16730 13413 13413 1 9606 Homo sapiens -0.011735401460782668 FLVFVANFDENDPK Unmodified 1653.8039 0.80387296 1080 A0A0S2Z3X8;P31150;B4DH24 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 7 0 1 64.986 65.013 3 0.00085815 20103 20230619_1887_Aki_TMTPro18x_K_F7 83.358 65.342 43295 35336 49519 47528 28958 39814 38726 41731 57835 48236 46473 59749 53827 56321 66216 54286 57449 80669 40081 32449 49466 46903 32051 40868 39107 42693 57361 48778 48660 59962 55362 58094 66572 56095 55212 76255 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60873000 8798 1080 8325 16731 13414 13414 1 9606 Homo sapiens 0.0031231782384111284 FLVGFTNK Unmodified 924.5069 0.50690308 1503 C9J3L8;C9J5W0;B2R6N9;A0A3B3IRT8;E9PAL7;C9IZQ1;P43307;P43307-2 SSR1 Translocon-associated protein subunit alpha yes no 0 0 0 4.5 0.5 1 1 60.285 60.312 2 0.0095993 18009 20230619_1885_Aki_TMTPro18x_K_F5 113.41 61.18 486260 426670 467200 478790 494440 587070 556860 569320 671490 304940 270780 213520 266320 210960 475060 300950 299290 264160 449690 391000 476760 480840 513600 584930 561130 575660 660470 320250 296590 221340 281820 222580 468720 299480 287810 251420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 562000000 8799 1503 8326 16732;16733 13415;13416 13416 2 9606 Homo sapiens 0.04162990248414644 FLVGPDGVPLRR Unmodified 1324.7616 0.76155464 3398 Q7L4Q3;P07203;Q6NSD4;A0A994J702;A0A994J430;A0A994J4L4;A0A2R8Y6B6 GPX1 Glutathione peroxidase;Glutathione peroxidase 1 yes no 0 0 1 4 0 1 50.69 50.721 3 4.9549E-13 14300 20230619_1883_Aki_TMTPro18x_K_F4 163.9 91.76 67230 49170 56289 60223 72535 74202 78556 79832 84111 86445 85572 83391 94274 82505 87269 90803 92434 97001 62040 45129 58362 60107 74192 74114 79016 81309 85474 86911 88105 84776 95623 85584 89169 91458 88422 92050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144000000 8800 3398 8327 16734 13417 13417 1 9606 Homo sapiens 0.11216431996763276 FLVHNVK Unmodified 855.49667 0.49667274 199 D3YTB1;A0A024R2G7;F8W727;P62910;A0A090N8E7 RPL32;LOC402318 60S ribosomal protein L32 yes no 0 0 0 3 0.816 1 1 1 43.703 43.768 3 0.0043629 11162 20230619_1883_Aki_TMTPro18x_K_F4 111.28 51.128 367330 298810 301540 305100 349460 426320 393790 370070 382530 372630 249140 275360 485770 302900 265750 523200 453390 434970 339150 273680 312620 309340 360760 420620 393960 381890 385600 373610 272290 285230 477360 323700 285850 516400 431860 414140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2403500000 8801 199 8328 16735;16736;16737 13418 13418 1 9606 Homo sapiens 0.06314427313850501 FLVPDHVNMSELIK Unmodified 1640.8596 0.8596137 1961 H3BTL1;H6UMI0;Q658J6;Q9GZQ8;A6NCE7 MAP1LC3B;DKFZp762B153;MAP1LC3B2 Microtubule-associated proteins 1A/1B light chain 3B;Microtubule-associated proteins 1A/1B light chain 3 beta 2 yes no 0 0 0 8 0 1 61.795 61.824 3 1.2807E-08 18520 20230619_1888_Aki_TMTPro18x_K_F8 150.12 124.64 246850 218260 253230 267600 185110 216790 215920 226110 245920 309200 284930 278970 318120 250380 268140 345740 300280 334410 228420 200180 255740 265580 198610 223330 217090 232640 250750 306980 291880 283660 321110 264380 275770 345010 287230 317620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49328000 8802 1961 8329 16738 13419;13420 13419 2 9606 Homo sapiens 0.0648182773982171 FLVPDHVNMSELVK Oxidation (M) 1642.8389 0.83887826 4513 Q9H492;Q9H492-2 MAP1LC3A Microtubule-associated proteins 1A/1B light chain 3A yes no 0 1 0 7 0 1 54.481 54.545 3 0.004253 15553 20230619_1887_Aki_TMTPro18x_K_F7 66.004 46.681 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8803 4513 8330 16739 13421 13421 2804 1 9606 Homo sapiens 0.04317237360146464 FLVPDHVNMSELVK Unmodified 1626.844 0.84396364 4513 Q9H492;Q9H492-2 MAP1LC3A Microtubule-associated proteins 1A/1B light chain 3A yes no 0 0 0 8 0 1 61.024 61.056 3 3.3945E-22 18214 20230619_1888_Aki_TMTPro18x_K_F8 192.65 180.16 143630 122090 141960 172250 141770 175330 166640 164020 180950 182070 188120 202740 194310 167820 202670 225800 206000 248860 132830 112160 144560 169780 148080 176710 167030 168880 183840 183650 193100 203720 198530 177350 206270 227170 197370 235970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191410000 8804 4513 8330 16740 13422 13422 1 9606 Homo sapiens 0.05561541222755295 FLVQNIHTLAELK Unmodified 1524.8664 0.86641364 2639 B4E0B8;Q8TDN6;A0JLQ5 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog yes no 0 0 0 3 0 1 61.646 61.676 3 1.7917E-15 19113 20230619_1882_Aki_TMTPro18x_K_F3 195.43 143.51 104410 89016 101890 104500 108140 128110 122260 112270 134200 57360 46127 43913 45902 39428 69980 54236 54782 48588 96552 81618 103850 104580 112290 127360 122740 114350 132300 60658 51519 45095 48040 41608 69808 54000 52519 46232 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30469000 8805 2639 8331 16741 13423 13423 1 9606 Homo sapiens 0.12497508682713487 FLVSQNVDGLHVR Unmodified 1482.7943 0.79431133 4238 Q8N6T7-2;Q8N6T7;B4DDV3;B7Z5U1;M0R1N9 SIRT6 NAD-dependent protein deacetylase sirtuin-6 yes no 0 0 0 1 0 1 51.218 51.218 3 0.070279 14872 20230619_1880_Aki_TMTPro18x_K_F1 40.477 26.708 25233 20171 25070 25578 28289 28272 31842 23929 35661 33415 25757 30500 39139 25464 31554 31915 27436 33297 23328 18513 25532 25420 29201 28296 31988 25023 35749 33187 27513 30892 39103 26818 31995 32045 26331 31590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108510000 8806 4238 8332 16742 13424 13424 1 9606 Homo sapiens 0.0722259432895953 FLVTVIK Unmodified 818.52658 0.52657589 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;A0A7I2YQX3;B3KWD0 XPO1 Exportin-1 yes no 0 0 0 5 0 1 61.441 61.489 2 0.0039574 18558 20230619_1885_Aki_TMTPro18x_K_F5 151.51 25.653 810610 635320 871550 925310 792980 940460 980200 893700 844220 1119600 1017600 829220 1004400 721980 999600 801210 789580 720010 749810 584040 879590 910520 834680 948380 973500 922460 875990 1109900 1034400 851180 1023800 753290 1003800 800150 757020 684980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 294450000 8807 3228 8333 16743 13425 13425 1 9606 Homo sapiens 0.11005366259166749 FLVYVANFDEK Unmodified 1343.6762 0.67615325 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q5SX87;Q5SX86 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 0 8 0 1 63.895 63.917 3 1.9083E-09 19502 20230619_1888_Aki_TMTPro18x_K_F8 158.79 129.63 211630 134470 148200 152560 99179 215480 148590 142430 244140 192490 157250 282340 283340 337300 180760 383020 348780 493490 194930 123410 155220 153380 109440 211190 149860 151950 239850 194950 171690 284290 281250 348240 196050 389640 333090 467010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 342270000 8808 2533 8334 16744 13426 13426 1 9606 Homo sapiens 0.0180622202046834 FLVYVANFDEKDPR Unmodified 1711.857 0.85697116 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q5SX87;Q5SX86 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 1 8 0 1 62.036 62.065 3 1.1738E-11 18640 20230619_1888_Aki_TMTPro18x_K_F8 179.39 142.3 500830 446070 560430 505440 472120 543400 532680 464070 466740 566120 472890 350570 339210 246560 785980 204070 192480 122660 463810 408790 562680 506300 498750 544920 531760 482460 480020 559870 479180 361680 370640 255780 755390 203240 189420 117620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1329100000 8809 2533 8335 16745 13427 13427 1 9606 Homo sapiens 0.02951695606498106 FLYDDNQR Unmodified 1069.4829 0.48287317 3433;1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;Q59H80;Q6W6M6;P11388;P11388-2;P11388-3;P11388-4 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 0 0 3 0.816 1 1 1 46.556 46.622 2 0.00083094 12596 20230619_1882_Aki_TMTPro18x_K_F3 166.96 152.8 373560 282790 325220 368020 275770 414440 351880 330790 425320 426520 446500 445150 484910 388740 359280 474330 430530 423860 344880 259670 334040 365110 293500 413340 352690 346400 430000 426600 458610 449170 487560 407400 372120 472160 411200 403150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 238550000 8810 1843;3433 8336 16746;16747;16748 13428;13429 13428 2 9606 Homo sapiens -0.049088949759152456 FLYSELMK Unmodified 1029.5205 0.52050423 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 1.5 0.5 1 1 62.211 62.216 2 0.0020058 19570 20230619_1881_Aki_TMTPro18x_K_F2 133.6 79.192 152730 132460 163140 161130 141120 198510 165790 162130 207600 163780 151240 161510 181500 149340 190070 195880 190980 196520 141360 121480 164560 160860 149360 196960 167030 168200 206800 165510 159290 163690 184690 156950 193210 196110 182760 186630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 95284000 8811 1718;4020 8337 16749;16750 13430;13431 13431 2 9606 Homo sapiens 0.006924799653688751 FMADCPHTIGVEFGTR Unmodified 1836.8287 0.82872428 492 A0A024R845;P61106;X6RFL8;A0A994J451;A0A994J4B9 RAB14 Ras-related protein Rab-14 yes no 0 0 0 7 0 1 53.477 53.544 3 1.2264E-26 15145 20230619_1887_Aki_TMTPro18x_K_F7 222.75 217.43 77136 62603 73506 79085 62766 63424 86190 75654 67948 85320 79321 78177 82991 65044 91477 77329 89089 91459 71294 57452 74846 78326 66568 65629 84990 76755 70789 85426 81055 79218 84940 68242 92658 78344 85279 86710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 455810000 8812 492 8338 16751 13432 13432 1 9606 Homo sapiens -0.05621693636794589 FMCEVQVEGYNYTGMGNSTNK Oxidation (M) 2444.0083 0.0082811394 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 1 0 7 0 2 57.234 57.289 3 1.5525E-05 17061 20230619_1887_Aki_TMTPro18x_K_F7 91.64 83.249 34302 21273 30749 34955 28480 37628 37625 32464 40550 39574 39387 45747 51598 48848 37980 63826 52874 68131 31643 19606 31534 34183 30062 37695 37485 33736 41109 39823 41036 46294 51680 51061 39832 64051 50551 64609 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64229000 8813 3811 8339 16752;16753 13433;13434 13434 2486;2487 2 9606 Homo sapiens -0.15596266992361052 FMCEVQVEGYNYTGMGNSTNK Unmodified 2428.0134 0.013366517 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 7.5 0.5 1 1 60.992 61.035 3 3.3883E-16 18244 20230619_1887_Aki_TMTPro18x_K_F7 146.28 135.57 23458 14963 21559 22409 14839 18840 22744 21702 24925 26493 25436 28166 33159 27578 22968 36890 34468 40610 21647 13773 21966 21970 16180 19375 22548 22111 25302 26566 26420 28508 33122 28970 24248 37080 32910 38509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56541000 8814 3811 8339 16754;16755 13435;13436 13435 2 9606 Homo sapiens -0.14351963129774958 FMCEVQVEGYNYTGMGNSTNKK 2 Oxidation (M) 2588.0982 0.098158779 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 2 1 8 0 1 49.993 50.069 4 4.613E-05 13561 20230619_1888_Aki_TMTPro18x_K_F8 77.681 70.147 24891 21456 30387 31890 40278 28448 33282 31201 27086 34665 35519 32575 33182 26736 32477 36954 31762 31641 23065 19722 30547 31296 40702 29127 33785 31790 28330 34758 35932 32982 33889 28312 33024 36662 30396 30110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61230000 8815 3811 8340 16756 13437 13437 2486;2487 1 9606 Homo sapiens -0.13236637383806737 FMDQHPEMDFSK Oxidation (M) 1526.617 0.61700017 4703 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 1 0 3.5 0.5 1 1 48.22 48.28 3 0.051417 13163 20230619_1883_Aki_TMTPro18x_K_F4 41.577 34.207 94050 60580 84720 91947 89537 95014 92469 94646 108140 106150 112360 108250 121550 96071 99432 145780 119610 133970 86779 55765 86943 90284 92712 95814 93576 97025 109470 106730 115440 109490 122680 102150 102880 144880 114350 127320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95532000 8816 4703 8341 16757;16758 13438 13438 2868 1 9606 Homo sapiens -0.1252436532770389 FMDQHPEMDFSK Unmodified 1510.6221 0.62208554 4703 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 5 0 1 52.962 53.034 3 0.00018009 15101 20230619_1885_Aki_TMTPro18x_K_F5 86.467 73.7 57030 48013 61624 67738 48374 64336 60659 59235 75060 74787 67856 73557 83509 67994 69521 89789 80107 91768 52778 44110 62067 66717 51718 65159 60912 61308 75400 74727 70676 74541 84062 71498 71640 89922 76624 87098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114260000 8817 4703 8341 16759 13439 13439 1 9606 Homo sapiens -0.11280061465072322 FMELLEPLNER Oxidation (M) 1405.6912 0.69115139 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 1 0 3.5 0.5 1 1 61.82 61.837 2 0.024147 19050 20230619_1883_Aki_TMTPro18x_K_F4 68.484 44.927 46981 40496 37421 45017 49507 49511 53466 56216 62868 47228 53475 47996 50721 49854 58685 56882 51873 56721 43384 37110 39037 45164 50565 49899 53952 56711 63081 48263 55173 48807 52275 51708 59152 57050 49731 53857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174380000 8818 2337;3778;3779 8342 16760;16761 13440 13440 1447 1 9606 Homo sapiens 0.004533458261448686 FMELLEPLNER Unmodified 1389.6962 0.69623677 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 4.33 0.471 2 1 63.951 63.972 2;3 0.0014076 19969 20230619_1883_Aki_TMTPro18x_K_F4 69.216 47.17 126330 104900 125540 126150 111810 145420 156050 153010 172310 174470 170880 174010 185540 163730 174130 193140 186830 207360 116820 96216 127450 125950 118580 145700 155270 156330 174590 175160 176070 176340 188400 170790 178080 194360 178780 196730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204950000 8819 2337;3778;3779 8342 16762;16763;16764 13441;13442 13441 2 9606 Homo sapiens 0.01697649688776437 FMELNLAQK Unmodified 1092.5638 0.56376603 2835 Q6FH24;D3DWY7;P61758-2;P61758 VBP1 Prefoldin subunit 3 yes no 0 0 0 3.67 3.09 1 1 1 60.277 60.283 3 0.00018841 18597 20230619_1880_Aki_TMTPro18x_K_F1 127.68 86.65 118400 99381 109220 110020 84531 113470 115180 112740 115480 125150 110100 103140 119130 97745 124410 128700 119990 122410 109430 91077 111380 110330 90737 114450 114400 115560 117490 125130 113610 105560 121520 102680 126200 128470 114860 116320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152580000 8820 2835 8343 16765;16766;16767 13443;13444;13445 13443 3 9606 Homo sapiens 0.021186697426401224 FMELNLAQK Oxidation (M) 1108.5587 0.55868065 2835 Q6FH24;D3DWY7;P61758-2;P61758 VBP1 Prefoldin subunit 3 yes no 0 1 0 8 0 1 54.683 54.75 2 0.0060044 15599 20230619_1888_Aki_TMTPro18x_K_F8 105.94 64.487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8821 2835 8343 16768 13446 13446 1696 1 9606 Homo sapiens 0.00874365880008554 FMEQVIFK Oxidation (M) 1056.5314 0.53140327 622 P61158;A0A024RAI1;Q59FV6;B4DXW1;B4DT29;B4E1U3;F8WDR7 ACTR3 Actin-related protein 3 yes no 0 1 0 8 0 1 56.73 56.787 2 0.069684 16490 20230619_1888_Aki_TMTPro18x_K_F8 65.156 28.396 95179 75704 85681 100650 95175 101680 104790 98577 82680 107560 112170 105000 119710 103120 110460 137610 127640 119840 87921 69518 88062 99583 98287 102670 104440 101190 86776 108090 114010 106740 121510 108230 113580 136650 121900 114040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11539000 8822 622 8344 16769 13447 13447 358 1 9606 Homo sapiens 0.005398823396262742 FMERDPDELR Unmodified 1306.5976 0.59758535 1214 A0A140VJZ4;P15374;A0A087WTB8;Q5TBK7 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 1 2 0 1 42.863 42.944 3 0.062816 11206 20230619_1881_Aki_TMTPro18x_K_F2 42.556 20.358 98767 78691 99452 114700 117250 142320 117550 132540 154450 104250 116140 107320 124430 91320 105900 116750 120530 111570 91317 72336 101350 113170 120540 141500 119650 135270 153570 107060 121240 108360 125780 96131 108880 116600 115120 106050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52867000 8823 1214 8345 16770 13448 13448 1 9606 Homo sapiens -0.04344953556278597 FMETSAK Unmodified 812.37384 0.37383999 452 A0A024R7I3;P61006;P61006-2 RAB8A Ras-related protein Rab-8A yes no 0 0 0 6.5 0.5 1 1 45.461 45.547 2 0.0051635 11557 20230619_1887_Aki_TMTPro18x_K_F7 143 80.287 68021 53660 68018 63654 67780 78456 66879 70642 86115 78444 85435 84363 82092 74675 85991 69447 98172 87885 62883 49220 69062 63677 70460 78030 68114 72898 86594 79065 87547 85012 84119 77080 87944 70968 93741 83316 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44848000 8824 452 8346 16771;16772 13449 13449 1 9606 Homo sapiens -0.039851971997450164 FMITGGNLQDSK Unmodified 1309.6336 0.63363651 2876 G5EA19;U3KQS5;E5RG17;Q6P1N9;H0YBX2;E5RID7;E5RI69;E5RJY6 TATDN1 Putative deoxyribonuclease TATDN1 yes no 0 0 0 1 0 1 55.566 55.566 3 0.025982 16721 20230619_1880_Aki_TMTPro18x_K_F1 55.314 38.372 47817 36195 53295 56057 53168 64257 56548 55205 55587 56477 51233 62959 71417 44454 63996 74869 63802 86873 44237 33303 53705 55053 55341 64107 56806 57070 56566 57192 53750 62990 71786 48169 65263 75364 61207 82301 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113440000 8825 2876 8347 16773 13450 13450 1 9606 Homo sapiens -0.008794963794116484 FMLQDVLDLR Unmodified 1248.6536 0.65364367 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;Q04637-6;Q96I65;H7C044;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 7.5 0.5 1 1 64.574 64.599 2 2.2064E-05 19788 20230619_1888_Aki_TMTPro18x_K_F8 159.4 0 49561 41139 43771 47231 29462 43807 46593 45130 45831 52147 53646 45330 59598 43524 51263 61134 50176 53151 45787 37716 44766 47167 32286 44571 45984 46213 47063 52104 54877 46321 60181 45917 52271 60674 48039 50557 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202540000 8826 1676;2901 8348 16774;16775 13451 13451 1 9606 Homo sapiens 0.03926299351178386 FMNAVFFLLPK Unmodified 1325.7206 0.72060102 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 8 0 1 66.889 66.907 3 0.0027754 20695 20230619_1888_Aki_TMTPro18x_K_F8 73.067 60.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8827 3758 8349 16776 13452 13452 1 9606 Homo sapiens 0.07076954632952948 FMNPFNMPNLYQK Oxidation (M) 1658.7585 0.75851945 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;F5H783 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 1 0 5 0 1 62.704 62.75 3 0.0068301 19161 20230619_1885_Aki_TMTPro18x_K_F5 60.509 49.404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8828 2088 8350 16777 13453 13453 1315 1 9606 Homo sapiens -0.044509472345453105 FMNPFNMPNLYQK Unmodified 1642.7636 0.76360482 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;F5H783 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 6 0 1 63.823 63.869 3 0.025989 19880 20230619_1886_Aki_TMTPro18x_K_F6 53.967 37.828 41724 36942 35004 27786 46062 54698 39910 47640 61918 18567 22208 24815 34967 22512 26122 23669 23931 30034 38550 33751 36242 29222 46899 53120 41261 48329 60122 20601 25221 24856 34826 23400 26584 24131 22961 28437 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179940000 8829 2088 8350 16778 13454 13454 1 9606 Homo sapiens -0.03206643371913742 FMQASEDLLK Oxidation (M) 1196.5747 0.57472465 3490;1446 A0A384MTW7;P15531;P15531-2;E7ERL0;E5RHP0;Q32Q12;P22392-2;J3KPD9 NME1;NME1-NME2;NME2 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 1 0 5.22 0.786 2 3 4 55.37 55.428 2;3 7.7194E-05 15778 20230619_1885_Aki_TMTPro18x_K_F5 129.89 106.28 1019500 840520 1014200 1044800 991560 947120 975580 971910 1056200 1132500 1243800 1169100 1188600 1008700 1130400 1389100 1159400 1246700 942740 771200 1030200 1037300 1030100 966290 987750 995830 1079300 1136800 1264400 1180500 1212000 1065600 1153600 1381100 1109700 1185300 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1766499999.9999998 8830 1446;3490 8351 16779;16780;16781;16782;16783;16784;16785;16786;16787 13455;13456;13457;13458;13459;13460 13456 936 6 9606 Homo sapiens -0.015699726737466335 FMQASEDLLK Unmodified 1180.5798 0.57981002 3490;1446 A0A384MTW7;P15531;P15531-2;E7ERL0;E5RHP0;Q32Q12;P22392-2;J3KPD9 NME1;NME1-NME2;NME2 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 0 0 5.5 1.12 1 1 1 1 61.112 61.149 3 2.0469E-06 18571 20230619_1886_Aki_TMTPro18x_K_F6 167.09 116.02 1635600 1326600 1472800 1507500 1157300 1443200 1461400 1452900 1580700 1881800 1796500 1712500 2135100 1627300 1764600 2070000 1819700 1911700 1511100 1216200 1505200 1507300 1237000 1464600 1460500 1495300 1613900 1873200 1847100 1743800 2149200 1705700 1805600 2063300 1741200 1817100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 6657799999.999999 8831 1446;3490 8351 16788;16789;16790;16791 13461;13462;13463;13464 13463 4 9606 Homo sapiens -0.0032566881113780255 FMQDASDVMQLLLK Oxidation (M) 1653.8106 0.8106146 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6 IPO5;RANBP5 Importin-5 yes no 0 1 0 3.67 3.09 1 1 1 65.279 65.289 3 0.0028417 19746 20230619_1888_Aki_TMTPro18x_K_F8 70.889 56.731 24252 16479 20881 22788 23433 26110 25446 20027 26118 22400 24581 20839 25777 21879 26376 25136 23707 27911 22376 15149 21544 22527 24199 26007 25547 20964 26499 22484 25328 21282 26294 22716 26658 25366 22737 26465 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61653000 8832 782 8352 16792;16793;16794 13465;13466 13466 472;473 2 9606 Homo sapiens 0.009861713885584322 FMQDPMEIFVDDETK Unmodified 1843.8008 0.80083777 724 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;H0YCC6 DDX39B;hCG_2005638 Spliceosome RNA helicase DDX39B yes no 0 0 0 3.5 1.71 1 1 1 1 1 1 64.895 64.919 3 4.783E-14 20377 20230619_1883_Aki_TMTPro18x_K_F4 178.23 167.6 101620 86457 108450 108580 87464 109690 104560 109260 100440 166350 164310 183160 196080 155510 141450 176320 187660 247990 94040 79325 109300 107870 93022 110810 104430 113170 105400 165430 167040 184120 196440 162600 147560 180720 179520 234570 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 385840000 8833 724 8353 16795;16796;16797;16798;16799;16800 13467;13468;13469;13470 13470 4 9606 Homo sapiens -0.08731061407502239 FMQDPMEIFVDDETK 2 Oxidation (M) 1875.7907 0.79066702 724 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;H0YCC6 DDX39B;hCG_2005638 Spliceosome RNA helicase DDX39B yes no 0 2 0 2.5 0.5 1 1 59.511 59.532 3 6.0733E-05 18333 20230619_1881_Aki_TMTPro18x_K_F2 95.755 85.559 25110 24287 26204 27372 31536 29533 31023 31068 34679 31277 29440 29897 35376 30524 30999 33679 31982 37399 23253 22250 26610 27429 32276 29756 31421 31636 34924 31565 30717 30438 35713 31642 31669 33995 30628 35462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37644000 8834 724 8353 16801;16802 13471 13471 430;431 1 9606 Homo sapiens -0.112196691327199 FMQDPMEIFVDDETK Oxidation (M) 1859.7958 0.79575239 724 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;H0YCC6 DDX39B;hCG_2005638 Spliceosome RNA helicase DDX39B yes no 0 1 0 3.5 0.5 1 1 63.403 63.422 3 0.0004722 19798 20230619_1883_Aki_TMTPro18x_K_F4 83.106 72.447 16035 11684 14272 16831 17117 18497 19945 15461 15584 17541 17650 17090 20257 17442 19251 18793 18691 19981 14804 10743 14706 16586 17616 18505 19801 16076 16220 17604 18130 17385 20542 18054 19560 18933 17898 18960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185550000 8835 724 8353 16803;16804 13472 13472 430;431 1 9606 Homo sapiens -0.09975365270133807 FMQDPMEVFVDDETK Unmodified 1829.7852 0.78518771 3204 O00148;B4DX78;O00148-2 DDX39A ATP-dependent RNA helicase DDX39A yes no 0 0 0 3 1.41 1 1 1 1 1 64.236 64.255 3 1.4833E-07 20158 20230619_1883_Aki_TMTPro18x_K_F4 122.93 104.57 90466 74237 83461 94982 67930 105140 84644 88377 100920 115710 98876 116000 128540 99462 104620 135950 123830 142860 83599 68136 85233 94318 72518 105080 84919 92174 101940 115470 102950 117140 129060 105140 108040 136300 118420 135540 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 330830000 8836 3204 8354 16805;16806;16807;16808;16809 13473;13474;13475;13476 13476 4 9606 Homo sapiens -0.09651347924568654 FMQDPMEVFVDDETK 2 Oxidation (M) 1861.775 0.77501695 3204 O00148;B4DX78;O00148-2 DDX39A ATP-dependent RNA helicase DDX39A yes no 0 2 0 2 0 1 57.35 57.367 3 0.063995 17546 20230619_1881_Aki_TMTPro18x_K_F2 50.608 39.792 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8837 3204 8354 16810 13477 13477 1882;1883 1 9606 Homo sapiens -0.12139955649786316 FMQTFVLAPEGSVANK Oxidation (M) 1753.8709 0.87090667 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7I2V5M7;A0A7P0P2U7;A0A7I2YQU8;A0A7I2V651;A0A7I2V2V1 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 1 0 1.5 0.5 1 1 59.904 59.911 3 5.6825E-06 18454 20230619_1880_Aki_TMTPro18x_K_F1 107.82 94.845 107450 89331 97527 113130 112470 116290 109800 108060 116870 111230 104630 95023 102580 92690 120050 111850 97390 112940 99288 81976 100200 112310 115530 117190 111090 111060 118210 111770 107830 97164 105600 96704 120480 112190 93508 107210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 313680000 8838 3846 8355 16811;16812 13478;13479 13478 2518 2 9606 Homo sapiens 0.02412605043309668 FMQTFVLAPEGSVANK Unmodified 1737.876 0.87599205 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7I2V5M7;A0A7P0P2U7;A0A7I2YQU8;A0A7I2V651;A0A7I2V2V1 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 2.5 0.5 1 1 62.799 62.818 3 1.0461E-08 19582 20230619_1882_Aki_TMTPro18x_K_F3 141.06 118.59 439570 386790 454900 470530 416510 541920 509780 501860 553830 551910 441170 424160 512680 396260 436390 544860 481120 463130 406770 354720 460480 469280 438760 541460 509960 516720 557600 551250 460970 435510 517170 417730 448160 540260 459780 440810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 899340000 8839 3846 8355 16813;16814 13480;13481 13481 2 9606 Homo sapiens 0.03656908905918499 FMQTFVLAPEGSVPNK Unmodified 1763.8916 0.89164211 755 Q9UN86;Q9UN86-2;A0A024RDE5;A0A024RDB2;A8K6V7;A0A7I2V3P9;A0A7I2V3E2;A0A7I2V647;A0A7I2YQS2;D6RB17;D6RAC7 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 0 2.5 0.5 1 1 62.829 62.849 3 2.8112E-08 19595 20230619_1882_Aki_TMTPro18x_K_F3 133.25 109.4 169160 154680 169720 172860 133710 177930 178350 175590 206200 213530 178760 172860 208850 146730 186350 224950 196550 182140 156540 141720 171880 173210 143190 179470 178130 180550 207530 212510 185990 176490 210940 156470 190660 222280 187860 173510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 367490000 8840 755 8356 16815;16816 13482;13483 13483 2 9606 Homo sapiens 0.040251954229688636 FMRDPIR Unmodified 933.48546 0.48545613 2105;3883 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;B4DNH2;J3KTB5;J3KSZ0;B4DKP9;J3KTN0;Q14240;Q14240-2;E7EQG2;Q9NZE6;B4DJX6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 1 2.5 0.5 1 1 40.582 40.648 3 0.029547 10116 20230619_1881_Aki_TMTPro18x_K_F2 73.975 58.345 336150 261710 305470 323890 343190 400110 396120 345580 446520 203780 181730 197000 199040 170970 266990 220940 229880 218370 310500 240170 313620 322950 355170 397450 397520 353190 440750 213860 200000 199520 205960 179870 267990 221230 220230 207480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 289390000 8841 2105;3883 8357 16817;16818 13484 13484 1 9606 Homo sapiens 0.016052819480705693 FMSAYEQR Unmodified 1030.4542 0.45421558 3804 Q15428;Q05DF2 SF3A2 Splicing factor 3A subunit 2 yes no 0 0 0 6.5 0.5 1 1 46.342 46.427 2 0.021475 11928 20230619_1887_Aki_TMTPro18x_K_F7 87.696 46.709 364800 306300 351310 359930 358180 435020 402370 397950 479460 364150 384760 355220 376990 325850 375580 401300 444640 374160 337270 280860 358220 360130 373120 433260 405470 408180 479920 369830 398730 360270 385110 341030 385860 400490 424280 355920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 195380000 8842 3804 8358 16819;16820 13485 13485 1 9606 Homo sapiens -0.05979335876713776 FMSVQRPGPYDRPGTAR Oxidation (M) 1949.953 0.95301359 470 A0A024R7T3;P52597;B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 1 2 5.75 0.829 2 1 1 36.312 36.39 3;4 2.004E-09 8036 20230619_1885_Aki_TMTPro18x_K_F5 137.3 114.87 212420 191780 212020 240200 271160 283950 290670 272030 282350 250560 274420 260440 280670 244780 271380 318200 269800 274790 196540 175920 216500 239130 277270 283560 291600 278190 287730 254740 282170 263660 285850 256790 276310 316040 258190 261440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 652170000 8843 470 8359 16821;16822;16823;16824 13486;13487 13487 286 2 9606 Homo sapiens 0.01603520174944606 FMSVQRPGPYDRPGTAR Unmodified 1933.9581 0.95809897 470 A0A024R7T3;P52597;B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 0 2 7 0.816 1 1 1 40.058 40.105 4 3.043E-23 9537 20230619_1886_Aki_TMTPro18x_K_F6 199.01 178.16 294930 250100 261390 281180 297050 353920 351890 337500 371210 366360 331050 330650 395010 296270 331680 382000 392490 365790 272520 229230 269070 282430 307440 351970 352110 346620 375660 367630 344350 336150 397910 311500 342000 381440 374760 347700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 759260000 8844 470 8359 16825;16826;16827 13488;13489;13490 13488 3 9606 Homo sapiens 0.028478240375761743 FMTDPIR Unmodified 878.43202 0.43202358 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 0 6.5 0.5 1 1 49.794 49.875 2 0.0074515 13514 20230619_1887_Aki_TMTPro18x_K_F7 125.08 60.219 471910 376640 434830 474180 427750 535270 502930 475250 550480 535690 566870 575010 566680 466920 554670 581950 615300 583350 436010 345670 445030 471590 447470 535090 504210 491400 558730 539370 580960 578290 577730 491340 567720 582990 587910 554170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 289290000 8845 543 8360 16828;16829 13491 13491 1 9606 Homo sapiens -0.012055155544430818 FMTILCTR Oxidation (M) 1056.5096 0.50962197 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 1 0 3.5 0.5 1 1 51.903 51.949 2 0.025209 14856 20230619_1883_Aki_TMTPro18x_K_F4 77.318 63.323 117900 107520 113870 122570 148530 144670 123150 134260 149760 130030 138570 127330 139580 117680 146270 171560 145310 130370 109070 98533 116550 122860 150760 144450 126500 137720 150610 131610 142700 129220 142750 124500 148710 169170 138930 124320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158260000 8846 1062;1064 8361 16830;16831 13492 13492 627 1 9606 Homo sapiens -0.016372456805811453 FMTILCTR Unmodified 1040.5147 0.51470735 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 0 5.5 0.5 1 1 59.765 59.822 2 0.025614 18062 20230619_1886_Aki_TMTPro18x_K_F6 93.162 71.616 182440 182330 231950 178600 232710 237600 202140 240260 230150 175930 178170 177430 176070 154070 216140 181980 211370 196300 169310 166820 231130 181710 240580 235980 206660 243360 230730 181330 185270 179330 181740 161190 218620 183340 202180 186350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 478380000 8847 1062;1064 8361 16832;16833 13493 13493 1 9606 Homo sapiens -0.0039294181794957694 FMTPVIQDNPSGWGPCAVPEQFR Oxidation (M) 2648.2152 0.21517787 3242 O15371-2;O15371-3;O15371;B0QYA5;B0QYA6;B0QYA8 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 1 0 1 0 1 62.514 62.514 3 1.2808E-05 19524 20230619_1880_Aki_TMTPro18x_K_F1 89.946 82.325 6149.8 4753.4 5907.2 6150 7080 7306.8 5679.6 5421.1 9738.1 8335.8 6705.4 8707 8406.7 7548.2 8884 9159.9 8327 9748.4 5682.8 4364.2 6038 6109.2 7229.1 7259.8 5931.2 5747.7 9574.6 8286.7 7112.2 8773.7 8552.6 7908.9 8996.6 9211.3 7982.5 9247.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49095000 8848 3242 8362 16834 13494 13494 1909 1 9606 Homo sapiens -0.043001113818718295 FMTPVIQDNPSGWGPCAVPEQFR Unmodified 2632.2203 0.22026325 3242 O15371-2;O15371-3;O15371;B0QYA5;B0QYA6;B0QYA8 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 0 1.5 0.5 1 1 63.508 63.513 3 3.2804E-34 19921 20230619_1880_Aki_TMTPro18x_K_F1 199.7 174.08 72485 63261 72863 75063 65974 74230 78256 90055 82377 99241 90263 92133 100410 84676 89242 111690 95644 106020 67056 58004 73898 74863 69402 75493 78380 91102 84107 99525 92700 93619 101620 89027 91427 111420 91522 100720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127940000 8849 3242 8362 16835;16836 13495;13496 13495 2 9606 Homo sapiens -0.03055807519285736 FMVQTIFAPPNTSDMEAVWK Oxidation (M) 2327.0966 0.096625862 2148 A8KA83;Q9P0L0;Q9P0L0-2 VAPA Vesicle-associated membrane protein-associated protein A yes no 0 1 0 2 0 1 64.453 64.461 3 7.0014E-06 20589 20230619_1881_Aki_TMTPro18x_K_F2 95.094 80.166 12516 10146 10750 17314 11409 12617 13872 18418 13597 14223 19213 14368 16746 15589 17089 20857 18637 19322 11559 9344.8 11117 16820 11865 13236 13851 18296 14081 14593 19310 14662 17193 16311 17479 20776 17822 18366 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13212000 8850 2148 8363 16837 13497 13497 1343 1 9606 Homo sapiens -0.013838586196015967 FNACFESVATNIDEIYK Unmodified 2019.9248 0.92479273 1432 G8JLG1;A0A384MR33;Q14683;A0A6Q8PHC3;V9GY57 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 6.5 0.5 1 1 63.591 63.632 3 2.8387E-18 19482 20230619_1887_Aki_TMTPro18x_K_F7 171.56 155.62 120230 97760 120970 120500 102820 117980 128030 119660 122760 130090 133140 135610 154920 129120 122150 161490 143370 161160 111180 89694 122560 119820 108900 119530 127500 122460 125840 131070 137070 137250 155860 135140 126190 161620 137090 153010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162350000 8851 1432 8364 16838;16839 13498;13499 13499 2 9606 Homo sapiens -0.044372673156203746 FNADEFEDMVAEK Oxidation (M) 1559.645 0.64498906 3513 X1WI28;X5D2T3;P27635;F8W7C6;X5D7P1 RPL10 60S ribosomal protein L10 yes no 0 1 0 1.5 0.5 1 1 57.925 57.933 2;3 8.1859E-05 17647 20230619_1880_Aki_TMTPro18x_K_F1 99.991 91.17 71016 62118 65633 75516 68505 68628 70395 75954 72981 80014 83229 75277 79753 75933 80617 90485 78262 92145 65654 56969 67209 75080 70930 70117 70993 77194 74652 80482 84721 76713 81591 79051 81894 90760 75000 87451 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147220000 8852 3513 8365 16840;16841 13500;13501 13500 2180 2 9606 Homo sapiens -0.11244763866602625 FNADEFEDMVAEK Unmodified 1543.6501 0.65007443 3513 X1WI28;X5D2T3;P27635;F8W7C6;X5D7P1 RPL10 60S ribosomal protein L10 yes no 0 0 0 2.5 1.12 1 1 1 1 62.598 62.609 2 5.2746E-21 19505 20230619_1882_Aki_TMTPro18x_K_F3 231.67 202.71 80385 75546 86710 81457 71606 95744 97881 89915 106270 105110 85016 90296 119470 94558 84611 135120 115860 128760 74447 69191 87332 82015 76384 95584 97412 92666 107010 104990 89750 92532 119180 99592 88659 134600 110640 122320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121460000 8853 3513 8365 16842;16843;16844;16845 13502 13502 1 9606 Homo sapiens -0.10000460003971057 FNAHGDANTIVCNSK Unmodified 1646.7471 0.74710314 1431 A0A384MR27;P09382 LGALS1 Galectin-1 yes no 0 0 0 7 0.816 1 1 1 42.617 42.674 3 9.8787E-09 10306 20230619_1887_Aki_TMTPro18x_K_F7 144.18 131.06 168120 134070 155320 168810 268700 275700 286790 281650 309580 239200 215930 192850 291800 198500 204010 269750 223270 194300 155330 123040 160700 169020 270430 270790 288540 285980 310320 242750 229060 198300 290930 208500 210410 265530 213230 185450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6383599999.999999 8854 1431 8366 16846;16847;16848 13503;13504 13503 2 9606 Homo sapiens -0.050400530043134495 FNAHHGDTK Unmodified 1025.4679 0.46789181 3643 P53602 MVD Diphosphomevalonate decarboxylase yes yes 0 0 0 5.5 0.5 1 1 28.968 29.02 4 0.0038694 5448 20230619_1886_Aki_TMTPro18x_K_F6 86.624 73.424 21611 13912 30062 31214 33370 27032 26165 30435 25217 14825 38221 37594 22659 26170 34448 11300 34047 26578 20021 12882 29873 30020 34099 27724 26813 30458 26180 16509 37936 36737 24216 26555 34666 12534 32528 25109 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10114000 8855 3643 8367 16849;16850 13505 13505 1 9606 Homo sapiens -0.04382342053258981 FNALFAQGNYSEAAK Unmodified 1629.7787 0.77872084 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 2 0 2 60.255 60.266 2;3 3.4538E-07 18744 20230619_1881_Aki_TMTPro18x_K_F2 162.68 144.37 130220 90309 105780 123290 94973 129170 115780 121350 147500 167940 156550 178450 204760 186750 133250 261580 217680 248560 120110 83001 109460 121840 100370 129910 116550 125750 149000 167560 162360 181070 204240 196240 142140 260510 207680 236100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 539090000 8856 826 8368 16851;16852 13506;13507 13507 2 9606 Homo sapiens -0.010977369787042335 FNAPGAQQFCFLLSTR Unmodified 1855.9039 0.90393813 1005;1857 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;Q8TDI0;K7EMY3;Q659D0;Q659F1;B3KRD4;F2Z2R5;Q6ZSZ4;F6T542;A0A8V8TR54;Q12873;Q12873-3;Q12873-2;B4DLC6;A0A5F9ZHX5 CHD4;CHD5;DKFZp434P202;DKFZp434K213;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3 no no 0 0 0 6 0 1 63.339 63.388 2 5.603E-06 19626 20230619_1886_Aki_TMTPro18x_K_F6 139.74 126.32 39181 31555 36015 39978 28921 34292 40189 42741 41621 33851 31409 25459 27726 24666 32050 36555 30993 31248 36202 28960 36771 39616 30923 35292 39922 42841 41885 34432 32520 26244 28633 26095 32483 36231 29666 29735 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12480000 8857 1005;1857 8369 16853 13508 13508 1 9606 Homo sapiens 0.010222318859860025 FNASQLITQR Unmodified 1176.6251 0.62512073 4405 Q99623;F5GY37;Q99623-2;J3KPX7;F5GWA7;B4DW05;A0A976LZI3;A0A7I2V5F0;F5H3X6 PHB2 Prohibitin-2 yes no 0 0 0 3.5 0.5 1 1 51.609 51.656 2 0.00018296 14706 20230619_1883_Aki_TMTPro18x_K_F4 153.12 129.6 1056600 829590 911990 1094200 1063500 1432200 1290800 1274600 1539100 1348800 1263500 1373600 1617400 1332100 1424000 1535000 1494900 1515300 975670 761780 942400 1087200 1101400 1418000 1295300 1314800 1542900 1360600 1325700 1391800 1630200 1386400 1455900 1538000 1429800 1439300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1802699999.9999998 8858 4405 8370 16854;16855 13509;13510 13510 2 9606 Homo sapiens 0.0438731776628174 FNDDFIETR Unmodified 1155.5197 0.51965261 4689 Q9UNH6-2;Q9UNH6;Q9UNH6-3 SNX7 Sorting nexin-7 yes no 0 0 0 2.5 0.5 1 1 52.804 52.85 2 0.011282 15692 20230619_1881_Aki_TMTPro18x_K_F2 82.831 44.055 100060 88427 98237 126180 90276 101240 103800 104180 115150 116430 106330 105950 131820 106130 107950 137160 115940 130440 92559 81235 99990 123930 94782 104320 104250 106610 116390 116700 110620 108090 132550 111140 110800 136860 110950 123910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79409000 8859 4689 8371 16856;16857 13511 13511 1 9606 Homo sapiens -0.05188643149995187 FNDEDIEK Unmodified 1008.44 0.4400053 2708 B7ZKS3;Q86UV5;Q86UV5-8;B7ZKR8;Q86UV5-2;Q86UV5-7;Q86UV5-3;H3BLX5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes no 0 0 0 1 0 1 47.808 47.808 2 0.0020514 13437 20230619_1880_Aki_TMTPro18x_K_F1 143.7 95.96 36525 30347 30040 32077 33304 32929 37225 32143 38462 36849 47269 49381 42026 39249 37697 46691 51684 47421 33727 27801 31114 32280 34420 33242 37339 33044 39440 37370 47864 49224 42888 41186 39230 46818 49286 45049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19531000 8860 2708 8372 16858 13512 13512 1 9606 Homo sapiens -0.06387709823991372 FNDEHIPESPYLVPVIAPSDDAR Unmodified 2580.2496 0.24963234 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 3.5 0.5 1 1 61.189 61.205 3 3.0354999999999997E-19 18825 20230619_1883_Aki_TMTPro18x_K_F4 149.32 139.63 64748 63817 68946 81009 64141 81204 69029 71271 81474 92060 86104 89743 89799 75848 84891 88097 82785 99691 59980 58530 69697 80373 67222 81850 69739 74065 82557 91840 88315 90692 91283 79376 86317 88973 79346 94502 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100980000 8861 3299 8373 16859;16860 13513;13514 13514 2 9606 Homo sapiens 0.02271751302168923 FNDFDHR Unmodified 949.40423 0.40422892 4613 Q9NWH9;H7C3F4;A0A024R5U7;A0A024R5X3;Q9NWH9-3;H0YMM0 SLTM SAFB-like transcription modulator yes no 0 0 0 3 0 1 38.633 38.687 3 0.0014883 9041 20230619_1882_Aki_TMTPro18x_K_F3 142.19 134.25 74455 50945 66431 78436 91324 103770 80989 81530 120950 76501 77259 77004 80735 67222 71575 87901 92213 75552 68715 46892 68599 77211 92734 102450 83443 84686 119100 77721 81456 77852 81892 70744 74166 87267 87914 71952 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62658000 8862 4613 8374 16861 13515 13515 1 9606 Homo sapiens -0.07249702490332766 FNDIHVPIR Unmodified 1109.5982 0.5981777 4592 Q9NTI5-2;Q9NTI5;B7Z5S1;Q9NTI5-3 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 0 0 0 8 0 1 47.763 47.822 3 0.00094219 12617 20230619_1888_Aki_TMTPro18x_K_F8 98.055 78.458 35671 25009 33665 34710 30560 40199 33666 34183 43461 32373 31385 29932 37945 29480 33148 43696 39098 32154 32939 22989 34329 34318 32145 40068 34072 35290 43217 32772 33046 30521 38286 31173 34176 43006 37304 30688 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37290000 8863 4592 8375 16862 13516 13516 1 9606 Homo sapiens 0.047762539457380626 FNDPHVK Unmodified 855.4239 0.42390173 3312 O75643;A4FU77;B4E150;B4E0P5;Q9UNV9;A2RRQ7;Q7L5W4;Q9P172 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 5.5 0.5 1 1 38.692 38.779 3 0.015221 9016 20230619_1886_Aki_TMTPro18x_K_F6 81.594 39.485 273370 209790 275020 297830 340250 343640 348730 340400 447980 319690 393130 375580 367170 319880 352680 300220 436490 352610 252690 192820 280350 294060 348360 343930 354070 347450 448040 326150 404660 376840 375020 330780 363160 305180 416240 334660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255400000 8864 3312 8376 16863;16864 13517 13517 1 9606 Homo sapiens -0.009593264795739742 FNDQDIEEIVK Unmodified 1348.6511 0.65106071 3122 Q92541;I7GPQ7;H0YKX1 RTF1 RNA polymerase-associated protein RTF1 homolog yes no 0 0 0 2.5 0.5 1 1 60.351 60.371 3 4.7446E-05 18561 20230619_1882_Aki_TMTPro18x_K_F3 132.03 115.4 35794 29598 36603 44976 39159 41861 42701 41924 46136 46494 42222 42250 49875 42461 45072 51081 45469 48355 33106 27217 37204 44088 40551 42556 42955 42960 46681 46618 43845 43099 50432 44251 45973 51026 43520 45946 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196010000 8865 3122 8377 16865;16866 13518 13518 1 9606 Homo sapiens -0.009318775727933826 FNDSEGDDTEETEDYR Unmodified 1920.7133 0.71333921 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 0 1 0 1 43.791 43.791 2 8.6003E-06 11762 20230619_1880_Aki_TMTPro18x_K_F1 109.22 109.22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8866 4629 8378 16867 13519 13519 1 9606 Homo sapiens -0.21018892543679613 FNECGHVLYADIK Unmodified 1564.7344 0.73441319 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 6 0.816 1 1 1 51.631 51.707 3 2.017E-05 14346 20230619_1887_Aki_TMTPro18x_K_F7 102.38 84.066 2400400 2002100 2101100 2453000 2136300 2886500 2331100 2629600 3561000 3104200 2479300 2838700 3734700 3025300 2005200 4380400 3823900 4094700 2217600 1836600 2162500 2445500 2228800 2878700 2376900 2715500 3516600 3105800 2649600 2901700 3691400 3187000 2183000 4356200 3643000 3891200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3855199999.9999995 8867 3631 8379 16868;16869;16870 13520;13521 13521 2 9606 Homo sapiens -0.025364643965531286 FNEEHIPDSPFVVPVASPSGDAR Unmodified 2466.1816 0.18155278 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91;H0Y5C6 FLNA;FLJ00119 Filamin-A yes no 0 0 0 5.5 0.5 1 1 59.027 59.087 3 1.0021999999999999E-26 17751 20230619_1886_Aki_TMTPro18x_K_F6 190.64 176.18 78130 64720 67270 72890 82872 109240 77952 73520 98344 100670 105660 98335 94359 92216 107670 90393 99020 111590 72168 59324 69526 73393 84919 106860 79508 78290 99348 100270 107540 99699 97355 95221 108680 92117 94912 105720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 608290000 8868 3484 8380 16871;16872 13522;13523 13523 2 9606 Homo sapiens 0.00710926442161508 FNEENYGVK Unmodified 1098.4982 0.49818889 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;A0A024QZ91;A0A024QZC0;Q8WWM7-7;H3BSK9 ATXN2L Ataxin-2-like protein yes no 0 0 0 4.33 0.471 2 1 47.807 47.866 2;3 0.00011585 12835 20230619_1885_Aki_TMTPro18x_K_F5 153.05 110.58 68051 54060 62964 67391 75156 70284 68244 64627 83929 74858 86672 88387 89432 61737 75868 87730 93773 84368 62874 49609 64572 66998 76851 70765 69699 66718 84706 75524 88911 88222 90459 65984 78436 87518 89484 80203 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191250000 8869 4285 8381 16873;16874;16875 13524;13525 13525 2 9606 Homo sapiens -0.0471202817871017 FNEVAAQYSEDK Unmodified 1399.6256 0.62557424 4700 Q9Y237;Q9Y237-2;H0Y4T6;J3KMW3;H0Y610;H0Y8P6;A0A494C021;Q9Y237-3 PIN4 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 yes no 0 0 0 4.5 0.5 1 1 52.142 52.19 2;3 2.1589E-06 15004 20230619_1883_Aki_TMTPro18x_K_F4 165.7 124.41 113200 109790 119870 125090 121240 133350 130750 124750 137500 137540 169410 158190 153890 135060 143800 157970 167560 169420 104850 100590 121260 125210 126040 134060 131540 128420 140920 138940 171560 158940 157110 141280 147800 158990 160100 160790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154540000 8870 4700 8382 16876;16877 13526;13527 13526 2 9606 Homo sapiens -0.05825352095212111 FNFGEEEFK Unmodified 1145.5029 0.50293991 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 3.6 1.02 1 1 2 1 59.044 59.065 2;3 5.854E-08 17957 20230619_1883_Aki_TMTPro18x_K_F4 195.57 164.2 488800 374340 397970 468440 384930 492590 437490 472240 611210 587430 553380 691080 719060 621900 468430 850120 788070 890190 451110 343590 412110 465580 403380 495650 443510 486910 610790 590790 578320 694480 717200 655820 500520 851580 751640 844710 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 582240000 8871 1661 8383 16878;16879;16880;16881;16882 13528;13529;13530;13531 13530 4 9606 Homo sapiens -0.06399144035935933 FNFLEQAFDK Unmodified 1257.603 0.60298831 1186 B3KY04;A0A140VJM4;Q96CX2 KCTD12 BTB/POZ domain-containing protein KCTD12 yes no 0 0 0 4.5 3.5 1 1 63.986 63.998 3 4.4372E-07 19524 20230619_1888_Aki_TMTPro18x_K_F8 171.33 152.55 127050 115990 106470 95840 131660 190670 182780 189490 241580 182580 191120 193100 183100 168830 160950 201730 186590 192190 117410 106030 110300 99841 136630 185510 183000 193280 240520 185330 198080 194770 186210 176610 165700 201550 178320 182620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 551780000 8872 1186 8384 16883;16884 13532;13533 13533 2 9606 Homo sapiens -0.015509067021412193 FNFLNPNDPYHAYYR Unmodified 1929.8798 0.87983187 146 A0A024R1K8;Q15459;Q15459-2 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 2.5 0.5 1 1 58.435 58.457 3 2.1936E-25 17788 20230619_1882_Aki_TMTPro18x_K_F3 230.57 221.78 76949 66468 74858 86770 80522 92353 86904 83950 108550 93486 84793 92402 99116 81378 93544 102680 96816 101950 71161 61006 76381 86005 83424 92757 87900 86619 108410 93980 88805 93461 100430 85452 95452 102780 92637 96821 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 387220000 8873 146 8385 16885;16886 13534;13535 13535 2 9606 Homo sapiens -0.04791285275996415 FNHPEQAR Unmodified 997.47298 0.47297719 1516;3275 Q12756-3;A0A3B3ITW6;A0A3B3ITF7;Q12756;Q12756-2;A0A3B3ITE5;A0A3B3IUA1;A0A3B3IT28;A0A3F2YNW9;A0A3B3IU40;X5D7J0;A0A087WWA3;A0A8Q3WLB3;Q4R9M9;Q4R9M8;A0A8Q3WM94;A0A8Q3WLB2;A0A3B3ITK3;A0A024R4H4;O60333-2;O60333;O60333-4;Q4R9M7;O43896;O60333-3 KIF1A;KIF1B;KIF1Bbeta;KIF1C Kinesin-like protein KIF1A;Kinesin-like protein;Kinesin-like protein KIF1B;Kinesin-like protein KIF1C no no 0 0 0 3 0 1 27.755 27.875 3 0.049258 4865 20230619_1882_Aki_TMTPro18x_K_F3 53.404 41.337 10419 4932.6 10323 13215 11642 8897.3 10324 12947 12803 11550 16197 17916 16589 15482 12496 9313 18507 18032 9608.1 4591.2 10525 12594 11926 9412.6 10575 12912 13030 11937 16480 17800 16735 15727 13091 9959.3 17646 17036 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2262200 8874 1516;3275 8386 16887 13536 13536 1 9606 Homo sapiens -0.025860381906227303 FNHWELK Unmodified 972.48175 0.48175096 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 4.5 3.5 1 1 49.422 49.458 3 0.0012853 14126 20230619_1880_Aki_TMTPro18x_K_F1 141.39 61.482 652520 280850 626970 661270 617630 667160 728220 730340 802610 777540 816350 883770 915590 773410 843330 897520 839390 1029600 601390 260890 639120 636020 645170 674940 730240 743070 814050 786430 841820 888540 927760 808200 858980 907150 804480 975800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 596870000 8875 3402 8387 16888;16889 13537;13538 13537 2 9606 Homo sapiens -0.0055906455414742595 FNIHNNR Unmodified 913.45185 0.45184781 2331 B2RNR6;Q96KR1;B3KP82;B3KVS4 ZFR Zinc finger RNA-binding protein yes no 0 0 0 1.5 0.5 1 1 31.562 31.594 3 0.0042766 6341 20230619_1881_Aki_TMTPro18x_K_F2 104.11 51.428 38567 26999 38460 43053 47391 53473 47031 45549 72253 43163 52255 53131 47987 44601 52188 39471 61188 55266 35629 24859 39244 42262 48565 53071 48190 47026 71270 44126 54377 53176 49357 46020 53415 40678 58416 52346 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26603000 8876 2331 8388 16890;16891 13539;13540 13540 2 9606 Homo sapiens -0.00834003499494429 FNIHNNRK Unmodified 1041.5468 0.54681083 2331 B2RNR6;Q96KR1;B3KP82;B3KVS4 ZFR Zinc finger RNA-binding protein yes no 0 0 1 5 0 1 32.46 32.542 4 0.03999 6605 20230619_1885_Aki_TMTPro18x_K_F5 63.565 31.631 76089 58329 79310 81197 107130 101770 92485 106850 126070 73804 85039 69387 62275 60061 87947 61203 90000 64816 70355 53598 80706 80387 108600 101470 95136 107850 124710 76308 88115 70385 65578 62302 88932 61786 85917 61617 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42436000 8877 2331 8389 16892 13541 13541 1 9606 Homo sapiens 0.02769929971691454 FNILGTHTK Unmodified 1029.5607 0.56072956 1598 P42224;P42224-2;A0A669KB53;A0A669KBA4;A0A669KB56;A0A669KB68;A0A8V8TN81;A0A669KBI6;J3KPM9;A0A669KB52;A0A669KB75;E7EPD2 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription yes no 0 0 0 4 0 1 48.124 48.164 3 6.2719E-05 13114 20230619_1883_Aki_TMTPro18x_K_F4 143.5 81.852 248430 184570 208650 229920 241060 282400 246420 252020 326420 259200 268710 259470 274450 241250 254100 318810 300340 279670 229280 169420 215890 229120 248340 280830 250580 259710 325530 261770 278580 262960 279100 253460 261650 316760 286770 266120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135210000 8878 1598 8390 16893 13542;13543 13543 2 9606 Homo sapiens 0.04713162680127425 FNILGTNTK Unmodified 1006.5447 0.54474515 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2YQI1;A0A7I2V4R2;B7ZA24;P40763-3;P40763-2;A0A7I2YQD2;A0A7I2V4R3;A0A7I2V395;A0A7I2V2G1;A0A7I2V552;A0A7I2V4F6;A0A7I2V2T1;B5BTZ6 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 0 0 4 0 1 55.424 55.435 2 0.00010125 16415 20230619_1883_Aki_TMTPro18x_K_F4 155.42 75.514 98667 70826 83291 102130 102720 148740 115360 117300 158100 131810 134510 157060 152260 134050 111440 181330 167560 171420 91047 65125 86356 101090 105890 146010 116850 122370 157640 133290 139980 157530 153010 141480 117530 180680 159810 162900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32569000 8879 1660 8391 16894 13544;13545 13545 2 9606 Homo sapiens 0.0417345644324314 FNISTDRR Unmodified 1007.5148 0.514842 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;E9PLT0;E9PNG3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;A0A8I5KPQ8;A0A8I5KS07;A0A8I5KW29 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 1 1.5 0.5 1 1 36.856 36.885 3 0.00081727 8733 20230619_1880_Aki_TMTPro18x_K_F1 125.82 80.137 354170 272600 301440 318150 338470 389630 360680 354330 465990 265820 262050 193600 260000 205260 267000 295670 280180 168970 326960 250030 311280 318530 349670 387730 365440 362010 460010 271660 277950 200690 265780 216060 272230 288540 267180 162240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 227710000 8880 88 8392 16895;16896 13546;13547 13546 2 9606 Homo sapiens 0.01138517497884095 FNLMAIVSDRK Unmodified 1292.6911 0.69109181 2291 Q5LJB0;B2RB07;Q9Y5K5-2;Q9Y5K5-4;Q9Y5K5-3;Q9Y5K5;Q5LJA5;Q5LJA9;H0Y6Y4;B4DW59;B7Z9U9;H0Y4E0;H0Y636 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes no 0 0 1 5 0 1 60.58 60.631 3 1.8918E-09 18130 20230619_1885_Aki_TMTPro18x_K_F5 188.06 141.9 167210 136700 147470 153730 136560 163650 160090 166600 178340 164530 128320 137710 153690 123410 146320 174390 153850 132510 154470 125310 151330 154050 143500 164800 160640 169900 178740 165580 135220 140530 155690 130460 149480 172010 146980 126380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41404000 8881 2291 8393 16897 13548 13548 1 9606 Homo sapiens 0.056453906168144385 FNLSQESSYIATQYSLRPR Unmodified 2259.1284 0.128395 260 A0A024R3R5 LBR yes yes 0 0 1 4.5 0.5 1 1 58.588 58.618 3 7.2304E-86 17760 20230619_1883_Aki_TMTPro18x_K_F4 343.47 312.9 120510 142130 133140 119860 94348 152810 98907 119890 117450 130570 129450 131190 177140 139640 146810 195150 177160 189600 111840 129830 133560 123460 101580 151270 100220 124970 119210 131430 134340 133590 177800 146750 151770 194740 169300 180100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 70488000 8882 260 8394 16898;16899 13549;13550 13549 2 9606 Homo sapiens 0.04919593450222237 FNLTGLNEQVPHYR Unmodified 1686.8478 0.84780346 3202 P67870;Q5SRQ6;N0E4C7;A0A1U9X7J2;A0A7I2YQ78;Q5SRQ3;N0E472;N0E638;A0A0G2JM12;N0E466;N0E650;A0A7I2V500;N0E644;A0A0G2JM58;B4DUJ4;N0E6J1;A0A7I2YQQ2 CSNK2B;CSNK2B-LY6G5B-1181;CSNK2B-LY6G5B--991;CSNK2B-LY6G5B-562;CSNK2B-LY6G5B-560;CSNK2B-LY6G5B-1072 Casein kinase II subunit beta yes no 0 0 0 1.5 0.5 1 1 52.973 52.99 3 6.2031E-23 15730 20230619_1881_Aki_TMTPro18x_K_F2 239.98 204.94 167540 150130 187690 175230 159440 170730 171530 183740 188350 215170 191890 197400 223420 175380 212960 229000 201330 211640 155160 137620 188460 174950 168080 173340 172920 187620 191310 215150 198170 200440 226400 184540 216190 228250 192820 201160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 793370000 8883 3202 8395 16900;16901 13551;13552 13552 2 9606 Homo sapiens 0.031853470408350404 FNLTYVSHDGDDK Unmodified 1509.6736 0.67358707 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 49.616 49.693 3 1.8443E-11 13620 20230619_1885_Aki_TMTPro18x_K_F5 159.18 134.62 586950 521350 572920 617140 479870 560110 577870 565200 617620 824700 807000 869950 871100 707390 742440 1022500 877450 959110 542910 477980 582030 614750 508680 570950 578570 584200 635450 820460 822230 875590 880720 751740 766280 1018000 838790 911340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 297720000 8884 2326 8396 16902;16903 13553 13553 1 9606 Homo sapiens -0.06086278175143889 FNNYVDCMK Oxidation (M) 1205.4845 0.48452943 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 7 0 1 47.782 47.87 2 0.018413 12604 20230619_1887_Aki_TMTPro18x_K_F7 71.501 64.91 50854 37971 50209 62199 54948 56630 56886 57476 63853 70362 64718 66125 78287 60253 52036 84426 76033 77714 46992 34965 51196 60703 56724 57691 57471 59016 64761 70278 66932 67142 78202 63651 54880 83972 72528 73878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32151000 8885 3758 8397 16904 13554 13554 2436 1 9606 Homo sapiens -0.1099934527383084 FNNYVDCMK Unmodified 1189.4896 0.48961481 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7 0 1 53.217 53.288 2 0.00056111 15059 20230619_1887_Aki_TMTPro18x_K_F7 131.44 112.82 41687 30069 39822 40495 32246 43638 41192 39483 46295 54810 48904 45807 56371 43101 37911 64194 59126 60112 38504 27627 40507 40075 34405 43769 41185 41033 47032 54290 50335 46847 56408 45693 40192 63853 56373 57134 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36386000 8886 3758 8397 16905 13555 13555 1 9606 Homo sapiens -0.0975504141122201 FNPDGEEEDVTVQE Unmodified 1606.6635 0.66347589 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B3KME6;E7EMW0;E7EWM2;Q9NSN9 CEP170;DKFZp564B0982 Centrosomal protein of 170 kDa yes no 0 0 0 1 0 1 54.52 54.52 2 0.00013903 16201 20230619_1880_Aki_TMTPro18x_K_F1 104.52 97.834 18760 17325 17554 23206 20166 20172 19403 16179 24678 23405 26196 22154 26662 19634 21576 21587 29654 27994 17351 15902 18001 22897 20714 20544 19766 17021 24901 23240 26791 22466 26940 20469 22473 22019 28283 26527 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156570000 8887 1960 8398 16906 13556 13556 1 9606 Homo sapiens -0.1155893069103513 FNPETDYLTGTDGK Unmodified 1556.6995 0.69946747 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;A0A7I2V614;B4DEC3;B4DW08 ACO2 Aconitate hydratase, mitochondrial yes no 0 0 0 3 0.816 1 1 1 56.27 56.298 2;3 0.0044487 16944 20230619_1882_Aki_TMTPro18x_K_F3 70.272 61.452 22552 18882 23199 25358 21686 28666 23823 24669 31825 23904 27020 27231 28509 23666 27346 30985 26814 32873 20861 17338 23507 25111 22751 28627 24149 25461 31749 24320 28016 27389 28991 24921 27821 31112 25703 31180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29141000 8888 1050 8399 16907;16908;16909 13557;13558 13557 2 9606 Homo sapiens -0.05661428723578865 FNPETDYLTGTDGKK Unmodified 1684.7944 0.79443049 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;A0A7I2V614;B4DEC3;B4DW08 ACO2 Aconitate hydratase, mitochondrial yes no 0 0 1 6 0 1 52.088 52.165 4 2.3048E-05 14823 20230619_1886_Aki_TMTPro18x_K_F6 107.82 93.472 115770 80436 125230 121910 105100 122200 141300 125720 158530 145050 149490 147660 162810 126750 148130 173290 147770 158630 107020 74016 126120 119700 111750 123570 140880 128770 160120 145660 154380 149130 164960 133920 151020 172490 141470 150790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62067000 8889 1050 8400 16910 13559 13559 1 9606 Homo sapiens -0.020574952523929824 FNPFVTSDR Unmodified 1081.5193 0.51925868 3695 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;A0A024RBF6;E5RHH1;J3KSS0 RPL26;RPL26L1;hCG_26523 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 0 5.33 3.09 1 1 1 53.732 53.778 2 1.9386E-05 15209 20230619_1887_Aki_TMTPro18x_K_F7 168.74 129.09 2007000 1752900 1897800 2032100 1946500 2476200 2158500 2007800 2560100 1209200 1112900 959510 1100200 845790 1433900 1390500 1209300 1024300 1855800 1606900 1938900 2034900 2027100 2458700 2175300 2062800 2523500 1260300 1209300 983540 1139100 905090 1439600 1368300 1158000 977430 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3085999999.9999995 8890 3695 8401 16911;16912;16913 13560;13561;13562 13561 3 9606 Homo sapiens -0.018240180791963212 FNPIETFLLGSCASDR Unmodified 1825.8669 0.86688392 801 A0A087WT20;Q9NV06;A0A087X1F8 DCAF13 DDB1- and CUL4-associated factor 13 yes no 0 0 0 1.5 0.5 1 1 65.394 65.398 3 1.4545E-11 20968 20230619_1881_Aki_TMTPro18x_K_F2 164.41 148.27 10919 10412 12302 11925 10551 14309 10733 12903 14394 14391 15556 13889 18160 12759 15513 18883 16225 17365 10118 9540.4 12355 11954 11127 14251 10938 13311 14506 14450 16006 14102 18306 13534 15880 18781 15525 16505 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47376000 8891 801 8402 16914;16915 13563;13564 13564 2 9606 Homo sapiens -0.013014844504141365 FNPLNAEVR Unmodified 1058.5509 0.55089316 46 A0A024QZR0;X6RK58;A0A024QZM2;Q8TCA0-3;Q8TCA0;A0A0A0MS58;A0A024QZL5;Q8TCA0-2 LRRC20 Leucine-rich repeat-containing protein 20 yes no 0 0 0 7.5 0.5 1 1 50.294 50.373 2 0.042026 13688 20230619_1888_Aki_TMTPro18x_K_F8 74.464 56.429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8892 46 8403 16916;16917 13565;13566 13566 2 9606 Homo sapiens 0.023959746747550525 FNQAQSGNIQSTVMLDK Unmodified 1879.9098 0.90981137 1598 P42224;P42224-2;A0A669KB53;A0A669KBA4;A0A669KB56;A0A669KB68;A0A8V8TN81;A0A669KBI6;J3KPM9;A0A669KB52;A0A669KB75;A0A669KB17;A0A8V8TLI6;D2KFR9;A5D905;E7ENM1 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription yes no 0 0 0 8 0 1 55.551 55.613 3 0.00064493 16024 20230619_1888_Aki_TMTPro18x_K_F8 72.433 59.232 21846 17590 19063 23243 20867 25149 24380 22939 25360 25366 24306 22372 27252 23826 25834 24246 28035 27659 20177 16151 19654 23023 21646 25227 24403 23657 25748 25422 25109 22900 27658 24560 26406 24557 26800 26236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50787000 8893 1598 8404 16918 13567 13567 1 9606 Homo sapiens 0.005052856070051348 FNQLVEQYK Unmodified 1167.5924 0.59242362 430 A0A024R753;Q9NW13;Q9NW13-2 RBM28 RNA-binding protein 28 yes no 0 0 0 1 0 1 57.599 57.599 3 0.00053741 17539 20230619_1880_Aki_TMTPro18x_K_F1 111.46 82.712 19032 19728 20789 29086 23882 26157 28842 24927 32313 31016 29789 32595 30044 27197 29134 34291 34726 34733 17641 18121 21074 28541 24686 26639 28882 25737 32624 31072 30717 32825 30632 28600 29979 34355 33172 32985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40173000 8894 430 8405 16919 13568 13568 1 9606 Homo sapiens 0.01533110643413238 FNQLVHFLR Unmodified 1172.6455 0.64546224 690 F5H5U2;A0A384N652;A0A024RBS0;Q8NHQ9;Q8TEC9;B4DVE4 DDX55 ATP-dependent RNA helicase DDX55 yes no 0 0 0 6 0 1 57.849 57.918 3 0.00019287 17278 20230619_1886_Aki_TMTPro18x_K_F6 109.11 83.66 25499 19610 22887 22522 20662 25695 23702 19290 29246 27370 29077 28945 28627 25694 27703 26761 32597 38516 23549 17984 23433 22550 21758 25595 23889 20383 29468 27292 29821 29192 29201 26683 28453 27533 31182 36437 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86135000 8895 690 8406 16920 13569 13569 1 9606 Homo sapiens 0.06604533216750497 FNQTYQLAHGTAEEK Unmodified 1735.8166 0.81656291 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 6 0 1 45.266 45.353 3 6.2857E-19 11829 20230619_1886_Aki_TMTPro18x_K_F6 206.19 194.5 125800 115610 119500 151890 145920 179000 133650 139310 120530 156880 185360 212500 164600 163480 161410 179660 208140 231790 116360 106090 122520 150660 149250 177970 135160 145570 126240 159210 186420 211440 168680 171030 166880 183140 198860 219520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274030000 8896 307 8407 16921 13570 13570 1 9606 Homo sapiens -0.021912707838964707 FNQVLDQFGEK Unmodified 1323.6459 0.64591575 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O43242-2 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 7.25 0.829 1 1 2 61.477 61.518 2;3 3.1237E-05 18462 20230619_1887_Aki_TMTPro18x_K_F7 137.01 100.33 390930 275250 328680 345120 255310 357620 346390 325330 408000 466800 391040 401110 389860 329910 357390 475630 420660 450260 360690 252730 338140 342960 274280 359780 345930 338420 411860 462100 402010 407650 396470 350420 368160 473810 402080 427820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1236500000 8897 2361 8408 16922;16923;16924;16925 13571;13572 13571 2 9606 Homo sapiens -0.0029613664471526135 FNSLNELVDYHR Unmodified 1505.7263 0.72629134 1416 A0A384ME16;Q6ICN0;B0LPF3;P62993;B3KR50;P62993-2 GRB2 Growth factor receptor-bound protein 2 yes no 0 0 0 7 0.816 1 1 1 55 55.068 3 3.9971E-24 15757 20230619_1887_Aki_TMTPro18x_K_F7 215.14 199.94 117550 90476 102280 117950 102660 119920 128780 127760 138890 140380 138560 133890 151970 130520 131000 154100 144760 159870 108540 83076 105290 116870 107390 121260 128640 130310 140950 141000 142730 136150 153700 136020 134470 154730 138470 151730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 784100000 8898 1416 8409 16926;16927;16928 13573;13574;13575 13574 3 9606 Homo sapiens -0.006342753216586061 FNTPALK Unmodified 789.43849 0.43848916 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 0 2 0 1 49.434 49.493 2 0.060145 14218 20230619_1881_Aki_TMTPro18x_K_F2 87.251 51.056 404540 342010 363860 422000 390850 414770 417530 403270 500380 432820 500510 534400 472000 445210 509980 513690 547790 588500 373840 313750 373740 419460 404630 419790 422000 413780 504780 439050 512620 534860 484790 465660 520040 519300 524030 558020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235300000 8899 1102 8410 16929 13576 13576 1 9606 Homo sapiens 0.035347456685599354 FNTPALKK Unmodified 917.53345 0.53345218 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 1 5 0 1 46.367 46.444 3 0.02955 12237 20230619_1885_Aki_TMTPro18x_K_F5 57.55 29.725 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8900 1102 8411 16930 13577 13577 1 9606 Homo sapiens 0.07138679139745818 FNTPQQPK Unmodified 958.48723 0.48723027 3129 J3KQ32;Q9NTK5;Q53SQ6;Q9NTK5-2 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 0 4.5 3.5 1 1 41.683 41.682 2 0.0012955 10830 20230619_1880_Aki_TMTPro18x_K_F1 163.72 124.06 144500 97222 141250 145030 153050 172910 144730 144800 184050 165020 187610 192330 188810 150300 159640 141360 222570 185160 133440 89459 143950 142830 157930 172030 147670 150430 185370 166570 192360 192460 191260 156060 166190 144730 212080 175540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100720000 8901 3129 8412 16931;16932 13578;13579 13578 2 9606 Homo sapiens 0.006326142376565258 FNTSDVSAIEK Unmodified 1209.5877 0.58773217 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J432;A0A994J428;B3KRA9;A0A994J4Q4;A0A994J6R6 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 5.2 0.748 1 2 2 52.237 52.302 2;3 4.2565E-12 14736 20230619_1885_Aki_TMTPro18x_K_F5 208.17 167.19 200460 185680 208890 226180 255040 302550 304890 302000 367960 255340 245520 252980 301800 245970 248090 276400 250280 251170 185580 170260 212400 226100 262780 300030 306260 307210 366120 260730 260160 256740 303650 255590 253500 275820 239450 238820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 594850000 8902 43 8413 16933;16934;16935;16936;16937 13580;13581 13580 2 9606 Homo sapiens -0.00867818290021205 FNTTSVIK Unmodified 908.49673 0.49673232 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 2.5 0.5 1 1 49.59 49.658 2 0.0067427 14246 20230619_1881_Aki_TMTPro18x_K_F2 117.89 64.723 258030 188990 218020 228750 259720 299980 273700 247580 334980 268240 275410 252800 301140 239020 306980 314800 290370 284810 238130 173430 225520 228660 267140 296710 276910 257130 335270 269750 286410 257070 306690 251080 311180 313440 277940 270850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 333940000 8903 2436 8414 16938;16939 13582 13582 1 9606 Homo sapiens 0.038823825231816045 FNVEDGEIVQQVR Unmodified 1531.7631 0.76307078 3095 H7C5A2;A0A8I5KXE1;A0A8I5KQA0;A0A8I5KTE8;A0A8I5KRL9;A0A8I5KW55;Q8N766-4;Q8N766-3;Q8N766-2;Q8N766 EMC1 ER membrane protein complex subunit 1 yes no 0 0 0 3 0 1 53.643 53.696 2 9.955E-06 15794 20230619_1882_Aki_TMTPro18x_K_F3 153.95 130.52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8904 3095 8415 16940 13583 13583 1 9606 Homo sapiens 0.018459765042052823 FNVIQPGPIK Unmodified 1111.639 0.63897988 569 A0A024R9D7;Q16698-2;Q16698;H0YAW3 DECR1 2,4-dienoyl-CoA reductase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 56.539 56.56 3 0.0025056 17014 20230619_1882_Aki_TMTPro18x_K_F3 81.338 52.38 249940 211360 249620 271300 301470 385650 343790 329870 431980 85076 76604 75690 89851 68391 155220 89772 82317 73866 231160 193980 254640 270470 310690 379740 346510 334310 419760 99519 96073 77262 94454 71940 152300 89199 79407 70358 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 176170000 8905 569 8416 16941;16942 13584;13585 13584 2 9606 Homo sapiens 0.08762595265375239 FNVLQYVVPEVK Unmodified 1433.7919 0.79185171 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 3.5 0.5 1 1 64.387 64.407 3 0.00014512 20313 20230619_1882_Aki_TMTPro18x_K_F3 105.17 88.946 84489 69977 60583 103520 72514 75308 98048 92187 98841 105520 99000 101060 133210 109910 80645 125140 114110 116930 77948 64327 63984 101330 75057 78667 97349 93433 100730 105790 103030 103130 132370 113910 85020 124920 108870 111140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 211000000 8906 3152 8417 16943;16944 13586 13586 1 9606 Homo sapiens 0.09230745871286672 FNVLYDR Unmodified 925.46577 0.46576654 2215 B2R514;E7EM64;Q7L5N1 COPS6 COP9 signalosome complex subunit 6 yes no 0 0 0 8 0 1 51.982 52.059 2 0.05841 14415 20230619_1888_Aki_TMTPro18x_K_F8 87.181 59.695 219050 176600 190490 213260 204750 232310 236890 228940 262310 273600 269280 289300 316290 253970 249960 334960 315810 292200 202310 162000 196260 212610 212540 233400 237760 235340 266220 274570 278100 291800 318130 267410 259430 332670 301360 278070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214670000 8907 2215 8418 16945 13587 13587 1 9606 Homo sapiens 5.229208954915521E-05 FNVPVSLESK Unmodified 1118.5972 0.59717465 3766 P82979;Q567R9;H0YHG0;F8VZQ9 SARNP;CIP29 SAP domain-containing ribonucleoprotein yes no 0 0 0 4.5 3.5 1 1 57.68 57.706 2;3 2.5393E-05 17522 20230619_1880_Aki_TMTPro18x_K_F1 177.78 129.27 323270 270890 283340 329280 282060 341620 329850 325140 355400 362420 351330 342980 408810 319260 355850 398440 367650 390370 298660 248480 291450 327870 294690 344090 330630 334350 360630 363690 363130 348360 412680 334460 363670 398550 351810 370770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 365430000 8908 3766 8419 16946;16947 13588;13589 13588 2 9606 Homo sapiens 0.04261994786179457 FNVTGTPEQYVPYSTTR Unmodified 1958.9374 0.93740633 4003 Q53HG1;Q9UI09 NDUFA12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes no 0 0 0 1 0 1 56.449 56.449 3 2.915E-18 17026 20230619_1880_Aki_TMTPro18x_K_F1 133.52 127.51 42906 44740 48914 47905 49737 64210 55178 53143 46464 56654 54933 46535 53699 46040 60079 60651 55966 52546 39788 40960 49211 48348 51767 63429 55070 55137 48220 56748 55883 47730 55142 48278 60756 60262 53564 50007 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92281000 8909 4003 8420 16948 13590 13590 1 9606 Homo sapiens -0.003704878611188178 FNVWDTAGQEK Unmodified 1293.599 0.59896556 2668 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6 RAN GTP-binding nuclear protein Ran yes no 0 0 0 6.22 1.31 1 2 2 2 2 56.358 56.414 2;3 6.2638E-17 16597 20230619_1886_Aki_TMTPro18x_K_F6 234.39 207.72 2011700 1763700 2041600 1912600 1741900 2350400 2161000 2104200 2262700 2586200 2539100 2457400 2794800 2316200 2558600 2799400 2797900 2744200 1861200 1615800 2066800 1926100 1847300 2337400 2158600 2179200 2312200 2583700 2603000 2496200 2832700 2419900 2620300 2801700 2674300 2607200 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 12374000000 8910 2668 8421 16949;16950;16951;16952;16953;16954;16955;16956;16957 13591;13592;13593;13594;13595 13593 5 9606 Homo sapiens -0.03608996195862346 FNVWDVGGQDK Unmodified 1263.5884 0.58840088 3721 Q6FH17;Q5U025;P62330 ARF6 ADP-ribosylation factor 6 yes no 0 0 0 6.5 0.5 1 1 59.667 59.72 2 6.8038E-06 17674 20230619_1887_Aki_TMTPro18x_K_F7 154.66 110.45 89689 83898 97919 88211 79294 96110 97663 95283 112350 113790 105990 111910 136840 102770 109210 134380 122050 128650 83070 76824 98457 88909 84386 96590 97893 97892 113430 113950 110420 113400 137280 108050 112380 134130 116690 122230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57638000 8911 3721 8422 16958;16959 13596;13597 13597 2 9606 Homo sapiens -0.03284978850274456 FNYSGSGGR Unmodified 943.41479 0.41479361 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 7.5 0.5 1 1 38.012 37.998 2 0.00024839 8657 20230619_1888_Aki_TMTPro18x_K_F8 142.56 131.34 107220 72417 105670 113330 127040 124480 128650 127010 130260 136440 154280 161480 167030 136050 136000 103610 167490 154010 99026 66673 107830 111190 130160 125080 129690 129850 133620 138110 157740 161780 168540 139560 140380 107600 159860 145800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129580000 8912 3823 8423 16960;16961 13598;13599 13599 2 9606 Homo sapiens -0.05917719835883872 FPAALAR Unmodified 744.42826 0.42825883 2860 D9HTE9 SLC25A1 yes yes 0 0 0 3 0 1 45.409 45.485 2 0.075191 12028 20230619_1882_Aki_TMTPro18x_K_F3 74.849 74.849 1167300 1056700 1070700 1147100 1177100 1393800 1193400 1288600 1419600 1369800 1343700 1263100 1385200 1118000 1300800 1421700 1413100 1347700 1079300 967990 1097800 1154600 1215900 1388400 1209700 1325300 1430800 1376800 1383600 1282600 1408100 1174400 1331100 1419300 1350500 1281100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1406600000 8913 2860 8424 16962 13600 13600 1 9606 Homo sapiens 0.045821827339864285 FPAAQAPDPSETPK Unmodified 1454.7042 0.70415892 1395 B3KSG3;F8W8M4;A0A2Z4N5U1;A0A3B3IS55;O14639-4;O14639-3;O14639-5;O14639-2;O14639-6;O14639 ABLIM1 Actin-binding LIM protein 1 yes no 0 0 0 5 0 1 49.282 49.359 3 0.00016422 13468 20230619_1885_Aki_TMTPro18x_K_F5 95.183 81.77 65271 49175 61154 62638 51290 64536 60022 61341 80321 70804 79597 80250 76663 70040 67761 83926 77653 81854 60293 45146 62329 62180 54399 65022 60665 63151 80601 71364 81560 80710 77953 73286 69700 83956 74231 77752 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26449000 8914 1395 8425 16963 13601 13601 1 9606 Homo sapiens -0.005004997901323804 FPAEQYYR Unmodified 1072.4978 0.49779495 2916 E9PGT1;Q15631;B3KRM8;H7C1D4;B7Z5D9;Q53GR3;Q15631-2 TSN Translin yes no 0 0 0 7 0 1 47.757 47.846 2 0.025055 12559 20230619_1887_Aki_TMTPro18x_K_F7 84.498 69.059 181730 141000 156520 168470 161660 194110 177000 168540 227910 182790 188840 192120 225410 192400 162400 282960 266590 274340 167790 129350 161260 168210 168200 193730 179110 174370 227650 184420 197140 194860 226070 203230 172660 281990 254110 260630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158010000 8915 2916 8426 16964 13602 13602 1 9606 Homo sapiens -0.03555403107930033 FPAGHSVIQLAR Unmodified 1294.7146 0.71460444 4549 Q9HC52;C9J6K3 CBX8 Chromobox protein homolog 8 yes no 0 0 0 4 0 1 46.764 46.806 3 0.0015763 12519 20230619_1883_Aki_TMTPro18x_K_F4 91.043 72.312 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8916 4549 8427 16965 13603 13603 1 9606 Homo sapiens 0.07903572445661666 FPAPGKPGNYQYTVFLR Unmodified 1954.0101 0.010117761 1136 B3KQF0;A0A0S2Z5M1;Q9UGP8;B3KWU4;A0A0S2Z518 SEC63 Translocation protein SEC63 homolog yes no 0 0 1 7 0 1 58.681 58.731 3 4.2857E-09 17291 20230619_1887_Aki_TMTPro18x_K_F7 128.99 116.61 174280 170480 164730 199970 161870 185830 200240 192110 203910 214230 199920 174360 198610 155470 196310 222890 215100 189710 161270 156240 168330 199350 169420 189160 199780 196470 207460 214070 205120 178300 202570 164610 200840 220960 205450 180630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114870000 8917 1136 8428 16966 13604;13605 13604 2 9606 Homo sapiens 0.07127310722967195 FPCTLVAQK Unmodified 1062.5532 0.55320134 1079 A0A0S2Z3W7;Q9BY32;Q9BY32-2;Q5NT82 ITPA Inosine triphosphate pyrophosphatase yes no 0 0 0 3 0 1 54.313 54.36 2 0.0073861 16069 20230619_1882_Aki_TMTPro18x_K_F3 104.44 63.45 67422 48759 63098 72744 59693 90267 69327 75442 110430 57833 53406 48031 69372 53021 55489 65240 70510 54486 62265 44851 64495 71669 62818 89503 70583 77604 107750 59233 58119 49435 69641 55197 57543 64739 67207 51924 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39500000 8918 1079 8429 16967 13606 13606 1 9606 Homo sapiens 0.024426870882052754 FPDELAHVEK Unmodified 1183.5873 0.58733824 1901 A0RZB8;Q6URC4;O60610-2;O60610-3;O60610;A0A1E1ERW3;A0A2R8Y5N1;Q7KZJ7;Q96IL1;B4DVR3 DIAPH1 Protein diaphanous homolog 1 yes no 0 0 0 3.5 0.5 1 1 50.888 50.939 3 0.029285 14375 20230619_1883_Aki_TMTPro18x_K_F4 56.225 39.014 62270 51393 60845 61628 58150 74178 62283 63099 85774 79657 82929 89054 99583 80273 71418 104940 90828 108130 57572 47137 61900 61564 60851 73785 63300 65668 85944 79938 85949 89702 99754 84421 74382 105130 86836 102610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135120000 8919 1901 8430 16968;16969 13607 13607 1 9606 Homo sapiens 0.0028880678080440703 FPDENFK Unmodified 895.40758 0.40758296 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 0 0 5 0.816 1 1 1 51.81 51.87 2 0.053821 14986 20230619_1883_Aki_TMTPro18x_K_F4 89.296 30.09 150860 113250 139790 149060 151670 189940 177330 162620 200380 187410 219760 227880 210600 194680 206850 236680 236750 254870 139340 104010 143210 148080 157510 188260 177990 168720 203510 189360 224240 228430 215180 204060 212230 238090 226360 241820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1658099999.9999998 8920 1716 8431 16970;16971;16972 13608 13608 1 9606 Homo sapiens -0.04430452436338328 FPDENFTLK Unmodified 1109.5393 0.53932542 61 B2R6X6;A0A024QZS4;P30405;R4GN99;H0Y548;P30405-2 PPIF Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase F, mitochondrial yes no 0 0 0 6.2 0.748 1 2 2 58.998 59.054 2;3 0.0017581 17698 20230619_1886_Aki_TMTPro18x_K_F6 112.8 77.506 263800 245270 269660 275460 249470 281190 278690 278530 302590 304150 298480 309340 334670 281520 310940 350510 344580 375750 244180 224730 273170 275890 261530 283920 280150 285450 306870 306160 308140 312900 339310 295040 318690 352400 329580 356510 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 448830000 8921 61 8432 16973;16974;16975;16976;16977 13609;13610;13611;13612 13611 4 9606 Homo sapiens -0.01106267139243755 FPDLAAEK Unmodified 889.45453 0.45453316 4176 Q7Z5U5;Q86WR0;Q6PK69;Q86WR0-2 CCDC25 Coiled-coil domain-containing protein 25 yes no 0 0 0 5 0 1 54.497 54.564 2 0.011773 15646 20230619_1885_Aki_TMTPro18x_K_F5 100.02 61.884 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8922 4176 8433 16978 13613 13613 1 9606 Homo sapiens 0.0053840711480006576 FPDLTVELNR Unmodified 1202.6295 0.62953741 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 6 0 1 60.877 60.934 2 1.0706E-07 18502 20230619_1886_Aki_TMTPro18x_K_F6 155.84 130.11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8923 1853 8434 16979 13614 13614 1 9606 Homo sapiens 0.036327821891973144 FPDSVEELR Unmodified 1090.5295 0.52948901 3941 Q15785;Q6ZPD0 TOMM34 Mitochondrial import receptor subunit TOM34 yes no 0 0 0 2 0 1 52.692 52.725 2 0.00048273 15622 20230619_1881_Aki_TMTPro18x_K_F2 153.08 115.52 107520 98324 111890 118200 115850 128460 124720 118750 148350 155370 173200 154380 165020 142440 146490 184700 167180 177120 99531 90151 113400 117880 120270 128920 125990 122980 150800 155050 176020 156480 167810 149540 150650 184390 159830 168270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87217000 8924 3941 8435 16980 13615 13615 1 9606 Homo sapiens -0.01215455144642874 FPEDLENDIR Unmodified 1246.583 0.58298115 3226 O14929;F8W9G7 HAT1 Histone acetyltransferase type B catalytic subunit yes no 0 0 0 1 0 1 57.072 57.072 2 0.00059344 17282 20230619_1880_Aki_TMTPro18x_K_F1 108.43 75.17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8925 3226 8436 16981 13616 13616 1 9606 Homo sapiens -0.030447024327713734 FPEEEAPSTVLSQNLFTPK Unmodified 2133.063 0.063000772 1878 B2RE46;A0A994J5J1;P04844-2;P04844;Q5JYR3;H0Y5M1 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 0 0 6 0.816 1 1 1 63.063 63.105 3 1.4606E-14 19217 20230619_1887_Aki_TMTPro18x_K_F7 152.94 142.8 195410 146160 163640 202410 152690 226350 203320 224300 278620 220550 226960 314620 382930 287130 190800 404000 336080 480560 180350 134310 169040 200010 161490 226790 204370 229180 277460 226090 242470 314270 376660 303520 206640 407620 321160 455090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1103300000 8926 1878 8437 16982;16983;16984 13617 13617 1 9606 Homo sapiens 0.041791792044477916 FPEFCSSPSPPVEVK Unmodified 1705.8022 0.8021584 4094 Q68E01-2;Q68E01;Q68E01-3;Q68E01-4 INTS3 Integrator complex subunit 3 yes no 0 0 0 7 0 1 60.033 60.079 3 0.00012468 17847 20230619_1887_Aki_TMTPro18x_K_F7 73.834 63.777 32274 29350 31769 36946 29769 35754 37990 36638 39784 42476 39952 40426 44259 37264 43390 47845 44586 47057 29860 26924 32323 36668 31318 36259 37884 37533 40458 42546 41185 41032 44991 39108 44229 47852 42665 44694 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21183000 8927 4094 8438 16985 13618 13618 1 9606 Homo sapiens -0.02251059256445842 FPEHELTFDPQR Unmodified 1514.7154 0.7153923 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2;B7Z602;A0A024R3G0;J3KTF1;J3QL06;B7Z4E6;A0A8Q3SHP7;A0A0G2JRG7;A0A0G2JRT9;Q9BST8 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 4 0.816 1 1 1 49.591 49.654 3 4.763E-13 13852 20230619_1883_Aki_TMTPro18x_K_F4 194.39 172.52 922930 733470 911650 991780 974050 1000300 1016900 1058500 1163900 867750 785440 778490 940610 697080 945290 936600 996160 957600 853170 673660 928350 980390 1007500 1012200 1027400 1072200 1161900 884870 830740 792010 954870 735090 963850 938510 952360 909450 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 538050000 8928 874 8439 16986;16987;16988 13619;13620;13621;13622 13621 4 9606 Homo sapiens -0.021376776959641575 FPEILQK Unmodified 873.496 0.49600404 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 1 0 1 58.698 58.698 2 0.043978 17946 20230619_1880_Aki_TMTPro18x_K_F1 88.942 34.393 192540 135110 179360 188110 178340 203690 209420 209030 243510 255820 194460 181400 286870 206090 150070 328480 314680 355070 177780 124200 183360 185800 186270 204850 210380 214360 244500 253800 205610 188610 283310 218590 165080 328950 299770 336810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251100000 8929 3650 8440 16989 13623 13623 1 9606 Homo sapiens 0.05419587874143872 FPEIVAPLLTSIDAISLECER Unmodified 2372.2297 0.22974852 2323 F5H8H2;B7Z301;B2RDU6;Q59ET9;Q03426;A0A1B0GWC2;B7Z1C2 MVK Mevalonate kinase yes no 0 0 0 7 0 1 68.234 68.254 3 1.4315E-06 21407 20230619_1887_Aki_TMTPro18x_K_F7 89.483 80.882 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8930 2323 8441 16990 13624 13624 1 9606 Homo sapiens 0.09852284037924619 FPELNYQLK Unmodified 1150.6023 0.60226003 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2YQI1;A0A7I2V4R2;B7ZA24;P40763-3;P40763-2;A0A7I2YQD2;A0A7I2V4R3;A0A7I2V395;A0A7I2V2G1;A0A7I2V552;A0A7I2V4F6;A0A7I2V2T1;B5BTZ6 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 0 0 1.5 0.5 1 1 60.492 60.498 3 0.0014998 18695 20230619_1880_Aki_TMTPro18x_K_F1 93.649 53.06 46520 35001 41659 50303 59710 69494 62488 60164 71245 57136 58247 54020 60166 52745 54001 73070 62034 65615 42957 32176 43063 49758 60711 68568 63075 62015 71536 57853 60429 55001 61079 55512 55573 72625 59301 62387 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70125000 8931 1660 8442 16991;16992 13625 13625 1 9606 Homo sapiens 0.03298298648792297 FPETTGCR Unmodified 966.42292 0.42291545 3822 Q12797;Q12797-10 ASPH Aspartyl/asparaginyl beta-hydroxylase yes no 0 0 0 4.5 0.5 1 1 39.149 39.216 2 0.022051 9216 20230619_1885_Aki_TMTPro18x_K_F5 87.181 59.656 53912 40687 44454 50820 67029 68778 59843 73127 81809 59587 75713 62481 70659 51951 59355 71257 84682 72951 49755 37346 46319 50727 67667 68285 61441 73975 81767 61059 77632 63038 71713 54999 62012 71350 80697 69315 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107390000 8932 3822 8443 16993;16994 13626 13626 1 9606 Homo sapiens -0.06163908910775717 FPFNTPK Unmodified 849.43849 0.43848916 3409 P08243-2;P08243;P08243-3;B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 4 0 1 54.419 54.435 2 0.069976 15974 20230619_1883_Aki_TMTPro18x_K_F4 78.178 4.5412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8933 3409 8444 16995 13627 13627 1 9606 Homo sapiens 0.007747456685592624 FPGQLNADLR Unmodified 1129.588 0.58800695 3748;1486;3381;983;1424;3870;2562;3176;3970;3201 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;G3V2A3;A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;A1L195;A1L196;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;A5D907;A5D906;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;M0R2D3;P04350;B4DJ43;B4DE77;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB3;TUBB2B;DKFZp566F223;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB8;TUBB4A;TUBB6 Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 0 0 5.5 2.69 1 1 1 1 52.156 52.213 2 0.00094221 14847 20230619_1886_Aki_TMTPro18x_K_F6 114.86 70.723 929620 760880 847310 911640 840170 1035100 990050 899880 1142400 765800 718910 687880 735920 600200 919790 771010 787190 727940 858970 697890 868040 909860 878460 1034000 993810 925440 1137200 779620 758620 699170 759210 631200 923900 770160 754050 692070 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 10203000000 8934 983;1424;1486;3748;3870;3970;3201;3381;2562;3176 8445 16996;16997;16998;16999 13628;13629;13630;13631;13632 13629 5 9606 Homo sapiens 0.02839646220513714 FPGQLNADLRK Unmodified 1257.683 0.68296996 3748;1486;3381;983;1424;3870;2562;3176;3970;3201 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;G3V2A3;A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;A1L195;A1L196;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;A5D907;A5D906;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;M0R2D3;P04350;B4DJ43;B4DE77;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB3;TUBB2B;DKFZp566F223;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB8;TUBB4A;TUBB6 Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 0 1 2.5 0.5 1 1 49.629 49.697 3 0.056412 14580 20230619_1881_Aki_TMTPro18x_K_F2 36.32 13.085 56455 49742 55413 53239 50699 52864 54840 55204 64592 43897 50964 47424 43615 43455 59323 50881 56158 45496 52219 45564 56284 53514 53135 53567 55370 55945 64625 45113 52619 47890 45545 45306 59822 50746 53689 43309 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9775700000 8935 983;1424;1486;3748;3870;3970;3201;3381;2562;3176 8446 17000;17001 13633 13633 1 9606 Homo sapiens 0.0644357969167686 FPHLFTGK Unmodified 945.50724 0.50723743 195;422 A8K5D8;A8K4G7;A0A024R2C5;O75351;I3L4J1;A0A024R705;Q9UN37 VPS4B;VPS4A Vacuolar protein sorting-associated protein 4B;Vacuolar protein sorting-associated protein 4A no no 0 0 0 4.5 0.5 1 1 52.555 52.604 3 0.0024067 14847 20230619_1885_Aki_TMTPro18x_K_F5 104.44 65.474 89468 67729 77489 83593 68370 96677 83863 86568 107960 95774 89743 88320 94202 83694 87438 116780 106280 99964 82598 62159 79637 83283 72393 96479 84411 89368 107870 96117 93118 89898 95741 88201 90234 115790 101460 95148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124570000 8936 195;422 8447 17002;17003 13634 13634 1 9606 Homo sapiens 0.03230409968296044 FPIDYPYSPPTFR Unmodified 1598.7769 0.77692993 4142 Q712K3 UBE2R2 Ubiquitin-conjugating enzyme E2 R2 yes yes 0 0 0 3 0 1 62.457 62.487 2 0.0037748 19448 20230619_1882_Aki_TMTPro18x_K_F3 84.507 42.398 22879 19490 22721 22643 20579 24266 23756 23168 29039 31784 37165 43452 35223 34904 38928 34800 36087 43451 21160 17868 23062 22637 21650 24392 23943 23983 29609 32009 37716 43259 36211 36262 39342 35474 34606 41151 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20599000 8937 4142 8448 17004 13635 13635 1 9606 Homo sapiens 0.001492540033041223 FPLDSTGSELK Unmodified 1192.5976 0.59756858 3074 H3BRL3;O14562;H3BUM8 UBFD1 Ubiquitin domain-containing protein UBFD1 yes no 0 0 0 6 0 1 56.385 56.459 3 0.00019811 16641 20230619_1886_Aki_TMTPro18x_K_F6 108.9 81.788 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8938 3074 8449 17005 13636 13636 1 9606 Homo sapiens 0.008973697153805915 FPLDYYSIPFPTPTTPLTGR Unmodified 2282.1623 0.16232089 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;H0Y5H6;H7C2T8;Q14157-1;Q14157-4;B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like no no 0 0 0 4.5 0.5 1 1 65.476 65.504 3 2.612E-16 20350 20230619_1885_Aki_TMTPro18x_K_F5 159.95 121.44 39723 38210 36405 44362 31556 40127 46035 46127 40624 55349 41242 48417 55401 41259 43589 55571 55114 55823 36745 35016 37246 44247 33573 41032 45414 46956 41813 55187 42956 49189 55504 43591 45232 55588 52626 53016 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 277030000 8939 3877;3878 8450 17006;17007 13637;13638 13638 2 9606 Homo sapiens 0.07252621889210786 FPLFGGWK Unmodified 950.50142 0.50142377 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 5.5 0.5 1 1 63.846 63.892 2 0.010839 19877 20230619_1886_Aki_TMTPro18x_K_F6 106.76 73.211 530850 512670 559540 490650 552710 789570 663580 652160 856950 86546 56011 51990 58465 50764 309680 76779 90110 56943 491640 469030 565810 501650 579240 772180 667980 660490 827500 118300 95809 54833 71785 53780 297050 76375 88109 54416 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 367960000 8940 3384 8451 17008;17009 13639 13639 1 9606 Homo sapiens 0.02419311456617379 FPLSHLDALK Unmodified 1139.6339 0.63389451 1610 A0A6M8YHF9;A0A6M8YDW2;A0A6M8YDW1;Q8IUF8-4;Q8IUF8;Q8IUF8-3 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA yes no 0 0 0 2 0 1 56.296 56.314 3 9.6586E-06 17113 20230619_1881_Aki_TMTPro18x_K_F2 153.12 97.57 151800 130290 133820 122190 118870 154370 177630 175410 193450 127760 100330 81385 109190 88973 151440 146690 116900 79559 140270 119230 137210 124660 126440 154130 176090 176390 192270 130370 107710 85179 113170 94531 151310 142760 111920 76413 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97883000 8941 1610 8452 17010 13640 13640 1 9606 Homo sapiens 0.0696629140272762 FPLTTESAMK Unmodified 1123.5583 0.5583463 3724 P62750;H7BY10;K7EJV9;K7ERT8;A8MUS3 RPL23A 60S ribosomal protein L23a yes no 0 0 0 6.14 2.23 1 2 2 2 55.376 55.434 2;3 4.2983E-05 15875 20230619_1887_Aki_TMTPro18x_K_F7 172.94 129.17 342350 268830 306130 314500 301270 347710 340460 351700 389940 361940 333370 321830 386340 306930 354440 406560 378720 362740 316200 246560 313980 314400 314620 349180 342590 359210 392290 364080 346980 328200 391000 322460 362600 404360 362010 345060 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1616399999.9999998 8942 3724 8453 17011;17012;17013;17014;17015;17016;17017 13641;13642;13643;13644 13642 4 9606 Homo sapiens 0.0015094616016995133 FPLTTESAMK Oxidation (M) 1139.5533 0.55326092 3724 P62750;H7BY10;K7EJV9;K7ERT8;A8MUS3 RPL23A 60S ribosomal protein L23a yes no 0 1 0 7.5 0.5 1 1 51.255 51.332 3 0.00012146 14178 20230619_1887_Aki_TMTPro18x_K_F7 120.76 88.545 197040 159430 182960 187760 179430 211740 218560 193740 222240 184160 188000 164560 196280 159700 178900 208810 184000 182890 182080 146210 187040 187640 187800 211870 218150 198990 224720 186140 194720 167960 199200 167510 182670 207520 175990 173990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 678530000 8943 3724 8453 17018;17019 13645 13645 2405 1 9606 Homo sapiens -0.01093357702461617 FPNLVDPWTPHLYAR Unmodified 1824.9311 0.93113916 2356 B4E0B7;B3KMS0;Q15021;B3KY03 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 4 0 1 62.184 62.189 3 0.0005387 19244 20230619_1883_Aki_TMTPro18x_K_F4 91.969 77.703 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8944 2356 8454 17020 13646 13646 1 9606 Homo sapiens 0.05167083488709068 FPNQNQTR Unmodified 1003.4835 0.48354187 3453 P14854;A0A494C160;K7EQD3 COX6B1 Cytochrome c oxidase subunit 6B1 yes no 0 0 0 7 0.816 1 1 1 34.617 34.655 2 0.0015979 7133 20230619_1887_Aki_TMTPro18x_K_F7 140.09 66.473 96461 65856 134600 139780 223690 249400 183490 201200 219450 60549 94330 87041 81527 74350 112060 40560 103330 73763 89395 60903 134960 136330 224180 242540 188350 204990 216010 69848 102140 86815 85150 75336 112510 43415 98745 69817 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 208990000 8945 3453 8455 17021;17022;17023 13647;13648 13647 2 9606 Homo sapiens -0.018060555362012565 FPPFFTLQPNVDTR Unmodified 1677.8515 0.85149185 171 K7EKV4;A0A024R1X3;Q9BRG1;K7EP45 VPS25 Vacuolar protein-sorting-associated protein 25 yes no 0 0 0 3.5 0.5 1 1 64.011 64.031 3 4.7275E-12 20018 20230619_1883_Aki_TMTPro18x_K_F4 186.16 169.28 52238 45804 50568 56504 42178 54607 45618 57228 56800 55829 60952 52243 64745 57356 58500 62703 56318 58029 48312 42014 51418 56162 44654 55403 46203 58220 57398 56393 62445 53427 65665 59267 59500 62661 53918 55159 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44973000 8946 171 8456 17024;17025 13649 13649 1 9606 Homo sapiens 0.039680168146787764 FPPLGGGGGIGYEANPGVPPATMSGSMMGSDMR Oxidation (M) 3210.4243 0.42426072 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 1 0 4.5 3.5 1 1 62.24 62.254 4 0.0035417 19545 20230619_1880_Aki_TMTPro18x_K_F1 62.858 60.634 32053 30535 33769 34509 31377 37245 35845 39850 43334 42388 44565 40500 44230 41926 45817 47081 45886 52097 29682 27976 34133 34577 32925 37515 36134 40581 43769 42649 45632 41274 45255 43468 46575 47507 43946 49406 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154880000 8947 1450 8457 17026;17027 13650;13651 13650 945;946 2 9606 Homo sapiens -0.09253443993065957 FPQLDSTSFANSR Unmodified 1468.6947 0.69465686 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 3.67 3.09 1 1 1 55.645 55.673 3 4.2487E-17 16624 20230619_1880_Aki_TMTPro18x_K_F1 178.22 156.17 119740 94223 109090 105870 95492 110390 106490 105890 114110 142410 117360 112530 147080 123700 135800 145630 124380 140290 110610 86382 111470 106070 100630 111210 107030 109450 116170 141030 121550 115970 148600 128430 137720 145670 119220 133240 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 510670000 8948 3606 8458 17028;17029;17030 13652;13653;13654 13653 3 9606 Homo sapiens -0.020942680756206755 FPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG Unmodified 3219.3137 0.31370176 3656 P55072;V9HW80;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;Q96IF9;Q0IIN5;Q9NTC4 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 2.5 0.5 1 1 58.48 58.502 3 0.00043911 17951 20230619_1881_Aki_TMTPro18x_K_F2 70.151 70.077 17414 14328 16341 22619 17779 22355 19499 19278 19751 28907 26752 25275 28285 23362 24512 32971 25833 30445 16094 13182 16753 22133 18420 22540 19576 20168 20431 28574 27173 25768 28631 24674 25114 32809 24736 28927 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 90017000 8949 3656 8459 17031;17032 13655;13656 13655 2 9606 Homo sapiens -0.20718254650864765 FPSGNYPPCIGDNR Unmodified 1592.7042 0.70417569 277 Q6FHH6;Q53TN2;B2R602;A0A024R3Z5;O43813 LANCL1 LanC-like protein 1 yes no 0 0 0 8 0 1 50.897 50.974 2 0.0021008 13932 20230619_1888_Aki_TMTPro18x_K_F8 88.441 63.055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8950 277 8460 17033 13657 13657 1 9606 Homo sapiens -0.06846823061755458 FPSINHD Unmodified 828.37662 0.37661719 3468 P17812;B4E1E0;P17812-2 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 8 0 1 45.647 45.685 2 0.032415 11791 20230619_1888_Aki_TMTPro18x_K_F8 94.163 78.724 39027 30165 35627 39732 39168 46268 42966 39209 70405 43949 41003 37717 43764 37282 36192 40776 40970 35605 36049 27700 36558 39410 40592 46116 43907 40679 68921 44052 43533 38560 44236 38655 37223 40626 39116 33892 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9640500 8951 3468 8461 17034 13658 13658 1 9606 Homo sapiens -0.044436057505663484 FPSLLTHNENMVAK Oxidation (M) 1615.8028 0.8028271 3732 P62906;Q1JQ76;A0A024RCW3 RPL10A 60S ribosomal protein L10a;Ribosomal protein yes no 0 1 0 1.5 0.5 2 2 51.378 51.4 3;4 1.0845E-06 14902 20230619_1880_Aki_TMTPro18x_K_F1 133.71 116.77 478660 415490 526340 489870 470420 635580 479760 512060 560570 693490 522940 689980 636300 593340 549320 676600 657630 757420 443140 380950 529730 490600 494210 628590 486050 536300 566180 690880 544410 696400 642180 619580 566820 682730 628860 718180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 728650000 8952 3732 8462 17035;17036;17037;17038 13659;13660;13661 13659 2410 3 9606 Homo sapiens 0.0195578018328888 FPSLLTHNENMVAK Unmodified 1599.8079 0.80791248 3732 P62906;Q1JQ76;A0A024RCW3 RPL10A 60S ribosomal protein L10a;Ribosomal protein yes no 0 0 0 1.67 0.471 1 2 54.871 54.887 3;4 3.9341999999999997E-22 16530 20230619_1881_Aki_TMTPro18x_K_F2 224.16 173.95 642440 529750 619200 702570 482700 819460 655380 725090 734790 829940 676420 882230 888840 783570 608880 951220 926580 1098900 593900 486380 629760 696590 519200 816710 653600 749870 742660 834580 707190 889220 887690 820530 643540 960320 884670 1041500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1034599999.9999999 8953 3732 8462 17039;17040;17041 13662;13663;13664 13663 3 9606 Homo sapiens 0.03200084045920448 FPSLPILSPALMDVPYR Unmodified 1915.0277 0.027741661 1056 A0A0S2A4E4;A0A0M4G3H8;P35573-2;P35573-3;P35573;G1UI17 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes no 0 0 0 5 0 1 66.091 66.134 3 3.5633E-06 20627 20230619_1885_Aki_TMTPro18x_K_F5 101.15 87.109 8186.6 5163.5 6893.6 5616.4 4598.7 4964.8 8295.7 9214.4 8652.9 6192.7 6354 7545.9 7680.7 9556.3 8206.3 6307.9 7316.6 10037 7549.2 4737 7069.4 5637.7 5058.1 5167.9 8162.7 9034.6 8693.1 6463.6 6698.1 7663.6 7842.1 9611.6 8276.3 6607.6 7027.9 9483.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22710000 8954 1056 8463 17042 13665 13665 1 9606 Homo sapiens 0.10682889933627848 FPTLWSGAR Unmodified 1033.5345 0.53451481 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 5.5 0.5 1 1 58.756 58.817 2 0.0008957 17385 20230619_1885_Aki_TMTPro18x_K_F5 120.87 100.39 248230 218520 244660 254670 243110 307410 312730 320400 348030 216490 196410 169190 181520 165560 274990 213810 216260 181190 229620 200320 248970 254990 254820 307030 312260 323550 346080 223140 208050 174000 190290 173400 274390 212470 207240 172570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 218050000 8955 3957 8464 17043;17044 13666;13667 13666 2 9606 Homo sapiens 0.01908893508652909 FPVEMTHNHNFR Oxidation (M) 1543.699 0.69903073 2767 CON__ENSEMBL:ENSBTAP00000018574;A0A7H0TJC6;Q8IVC0;P05546 SERPIND1 Heparin cofactor 2 yes no 0 1 0 7 0 1 35.877 35.949 4 0.00032511 7648 20230619_1887_Aki_TMTPro18x_K_F7 100.93 93.566 + 15063 13441 17637 15157 23848 24913 17851 20819 39861 19448 31287 40083 24783 26460 31627 24705 34652 34264 13956 12317 17776 15300 24149 24362 19022 21508 38928 20398 32279 39260 25871 27619 32168 25416 33122 32445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30249000 8956 2767 8465 17045 13668 13668 1648 1 9606 Homo sapiens -0.051070821337134475 FPVFNMSYNPAENAVLLCTR Oxidation (M) 2358.1137 0.11367291 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITV3;A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 1 0 3.5 0.5 1 1 63.454 63.472 3 1.3071E-16 19790 20230619_1883_Aki_TMTPro18x_K_F4 163.45 142.1 6481.3 5995.1 7756.7 7593.4 6944.2 6857.2 9214.9 8378.6 9164.4 9091.1 9757 8976.6 9536.1 8813.2 7586.8 8487.8 8269.1 9776.1 6007.8 5499.4 7760.8 7530.9 7324.9 7027.3 9157.8 8476.4 9361 9145.4 9966 9112.9 9650.5 9079 7792.3 8605.4 7915.6 9266.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42928000 8957 3647 8466 17046;17047 13669 13669 2336 1 9606 Homo sapiens -0.011059380137794506 FPVISVPHLPEK Unmodified 1361.7707 0.77072234 4392 Q96RF0-2;Q96RF0-3;Q96RF0 SNX18 Sorting nexin-18 yes no 0 0 0 2.5 0.5 1 1 59.686 59.707 3 0.0020928 18373 20230619_1882_Aki_TMTPro18x_K_F3 76.522 51.306 90009 67865 81475 92399 68200 83385 88617 87649 98612 83233 78323 77132 81106 78192 91538 96108 87594 95609 83123 62349 83351 91163 72526 85065 88482 89160 99048 84202 81470 78659 83259 81538 92711 96252 83903 90786 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 175730000 8958 4392 8467 17048;17049 13670;13671 13671 2 9606 Homo sapiens 0.10430780562455766 FQALKPK Unmodified 830.50142 0.50142377 2224 Q9H4M9;B2R5U3;A0A024R571;B4DMV9;B4DR44;B4DTR4;B4DZH9;C9J2Z4 EHD1 EH domain-containing protein 1 yes no 0 0 1 5 0 1 46.257 46.334 3 0.021705 12192 20230619_1885_Aki_TMTPro18x_K_F5 81.784 50.412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8959 2224 8468 17050 13672 13672 1 9606 Homo sapiens 0.07939311456607356 FQCGFGLTIG Unmodified 1098.5168 0.51681584 3367 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog yes yes 0 0 0 2 0 1 64.285 64.292 2 0.011439 20541 20230619_1881_Aki_TMTPro18x_K_F2 75.38 68.925 8833.2 6341.3 7429.9 7558.3 8368.3 9486.8 7567 8398.1 10459 10129 9174.9 9797 10654 7639.5 10962 10805 12549 12366 8150.8 5819 7678.1 7559.2 8608 9422 7768.3 8696.4 10447 10134 9545 9885.3 10834 8129.5 11227 10893 11990 11729 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23363000 8960 3367 8469 17051 13673 13673 1 9606 Homo sapiens -0.028501898085323774 FQDGAIR Unmodified 805.40825 0.40825167 2472 B4DF80;Q9H6R4-4;Q9H6R4;A0A0A0MRW6;Q9H6R4-2;B3KPN5;Q9H6R4-3 NOL6 Nucleolar protein 6 yes no 0 0 0 4.5 0.5 1 1 39.791 39.857 2 0.036118 9500 20230619_1883_Aki_TMTPro18x_K_F4 92.491 48.084 49404 39489 45990 57628 68095 61899 66243 64405 88712 55788 64528 62829 61455 56338 59370 67010 70433 57605 45650 36300 47398 56732 68868 62338 67541 65403 88026 57124 67195 63283 62773 58850 61056 66629 67194 54860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82946000 8961 2472 8470 17052;17053 13674 13674 1 9606 Homo sapiens -0.002236129966149747 FQDGDLTLYQSNTILR Unmodified 1882.9425 0.94249171 3419 V9HWE9;P09211;A8MX94;A0A087X2E9 HEL-S-22;GSTP1 Glutathione S-transferase P yes no 0 0 0 7.5 0.5 1 1 61.4 61.434 3 9.631499999999999E-53 18390 20230619_1887_Aki_TMTPro18x_K_F7 301.48 284.37 256310 215070 242740 269450 241630 279850 258300 272930 279660 302290 320860 345040 320190 307890 346930 338000 354140 401310 236940 197330 247860 267770 251660 282010 260290 280100 285460 305170 327510 347000 328310 320340 352680 342760 339100 380320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15746000000 8962 3419 8471 17054;17055 13675;13676 13675 2 9606 Homo sapiens 0.03633816001524792 FQDGVLEPDFPR Unmodified 1418.683 0.68302954 2802 CON__Q3ZBS7 yes yes 0 0 0 4 0.816 1 1 1 58.785 58.814 2 2.6376E-18 17883 20230619_1882_Aki_TMTPro18x_K_F3 240.82 221.04 + 258060 247090 261140 449110 544200 702270 426750 404000 950690 1269300 2332600 3588700 1378300 1756600 2597200 1377400 1994400 3253600 238900 227650 270590 439220 541640 683660 453740 457690 992190 1305400 2296600 3468800 1497500 1850400 2580000 1499000 1922800 3065800 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3264699999.9999995 8963 2802 8472 17056;17057;17058 13677;13678;13679;13680;13681 13677 5 9606 Homo sapiens -0.009564650989887014 FQDLGVK Unmodified 805.4334 0.43340378 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q1WWK5;B4DTL7;K7ENL0;K7EPY1;K7EJV0 SEPT9 Septin-9 yes no 0 0 0 8 0 1 52.026 52.103 3 0.02976 14432 20230619_1888_Aki_TMTPro18x_K_F8 75.213 36.421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8964 541 8473 17059 13682 13682 1 9606 Homo sapiens 0.02290441805962473 FQDTAEALAAFTALMEGK Unmodified 1912.9241 0.92406445 4712 Q9Y2X3;B4DUY3 NOP58 Nucleolar protein 58 yes no 0 0 0 2 0 1 68.032 68.038 3 1.3184E-06 21989 20230619_1881_Aki_TMTPro18x_K_F2 107.57 87.475 3679.6 2307.4 2824.3 3590.6 2347.6 3575.5 3388.8 3434.6 3557.4 2867.1 3343.5 3578.5 4267.5 3144.2 3682.5 5113.7 3584.7 4380.5 3390.9 2125 2939 3517.8 2513.8 3609 3362 3504.8 3603.2 2950.6 3482.9 3591.1 4294.9 3362.2 3757.9 5061.2 3436.3 4165.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2641400 8965 4712 8474 17060 13683 13683 1 9606 Homo sapiens 0.004119380352904045 FQDVGPQAPVGSVYQK Unmodified 1718.8628 0.86278482 2457;2620 Q59FH4;H0Y5J4;B4DDU5;Q9UJU6-5;Q9UJU6;B4DKZ4;B4DNX5;B4DXL9;Q9UJU6-2;Q9UJU6-3;B4DDD6;Q9UJU6-4;B4DUF9 DBNL Drebrin-like protein no no 0 0 0 8 0 1 54.526 54.593 3 3.2897E-06 15507 20230619_1888_Aki_TMTPro18x_K_F8 115.38 101.48 79624 62216 76154 83518 76412 80953 82336 82110 86488 99519 100050 103340 100940 81009 104350 112270 99914 107190 73578 57142 77690 82549 79481 82085 82837 84285 88487 99714 102100 103980 103110 85965 105850 112010 95690 101840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 293630000 8966 2457;2620 8475 17061 13684 13684 1 9606 Homo sapiens 0.03210794118172089 FQEAEERPK Unmodified 1132.5513 0.55128709 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72 HSPH1 Heat shock protein 105 kDa yes no 0 0 1 3 0 1 37.523 37.576 3 0.00024265 8577 20230619_1882_Aki_TMTPro18x_K_F3 128.87 88.145 138950 87747 117160 135330 147450 154700 147410 146480 191390 163730 163800 148530 192240 139480 131150 152930 181010 148140 128130 80797 121380 132930 150820 154740 149940 150650 191370 164170 170410 151180 192280 145020 137290 153160 172480 140870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 353400000 8967 769 8476 17062 13685 13685 1 9606 Homo sapiens -0.009686503960438131 FQEAVGQAGAISITSK Unmodified 1605.8362 0.83623572 2582 B4DST5;Q9H3S7;B4DJ21;B4DJ12 PTPN23 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type 23 yes no 0 0 0 1 0 1 56.871 56.871 3 0.00032308 17202 20230619_1880_Aki_TMTPro18x_K_F1 85.176 67.214 25029 17432 20361 23564 20476 23857 22732 23679 27740 27280 25151 26714 26883 25259 29592 30378 27248 29246 23086 16019 21093 23291 21350 24091 22947 24299 27883 27364 26024 27094 27526 26363 29919 30382 26107 27783 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11266000 8968 2582 8477 17063 13686 13686 1 9606 Homo sapiens 0.057551052268536296 FQEEANLYAAK Unmodified 1282.6194 0.61936665 496 B7Z5Q0;A0A024R864;Q96AL5;B7Z4A9;Q5JS98;P40426-4;P40426-3;P40426-2;P40426-5;P40426 PBX3 Pre-B-cell leukemia transcription factor 3 yes no 0 0 0 5 0 1 52.266 52.34 3 0.002411 14757 20230619_1885_Aki_TMTPro18x_K_F5 78.096 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8969 496 8478 17064 13687 13687 1 9606 Homo sapiens -0.010638255360618132 FQEHIIQAPK Unmodified 1209.6506 0.6506072 228 A0A024R394;Q9UHD1;A0A024R3C3;Q9UHD1-2;E9PPQ5;E9PIZ4;E9PSD5 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes no 0 0 0 7.5 0.5 1 1 45.647 45.71 3 0.00045006 11776 20230619_1888_Aki_TMTPro18x_K_F8 104.82 72.816 74372 54016 71261 73281 59211 83902 71684 68665 115330 94008 85236 104200 143360 114830 66844 200800 159810 174690 68698 49631 72498 72540 63033 83630 72884 71897 113830 94075 91430 105860 140930 122640 75196 198480 152110 166150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104150000 8970 228 8479 17065;17066 13688 13688 1 9606 Homo sapiens 0.054167922887017994 FQEKPDRR Unmodified 1074.557 0.55704117 897 A0A090N7T9;Q12765;Q12765-2;A0A024RA21;Q12765-3;B4DH22;B4DIV7 SCRN1 Secernin-1 yes no 0 0 2 7.5 0.5 1 1 31.579 31.631 4 0.071105 6210 20230619_1888_Aki_TMTPro18x_K_F8 57.859 45.633 156020 88396 174240 185890 233920 192890 193900 205550 206060 177980 253180 217920 185020 174620 222410 111640 225760 165760 144130 81810 176360 179650 236600 194810 198300 208380 210920 182540 254380 217910 192840 178200 225040 116650 215550 157090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71522000 8971 897 8480 17067;17068 13689 13689 1 9606 Homo sapiens 0.022744929062810115 FQELIFEDFAR Unmodified 1413.6929 0.69286595 498 A0A024R872;Q96TA1-2;Q96TA1;Q9H8K1 C9orf88;FAM129B Niban-like protein 1 no no 0 0 0 5 0 1 64.604 64.648 2 0.00027821 19997 20230619_1885_Aki_TMTPro18x_K_F5 141.08 119.78 56432 42670 50254 51106 51609 56669 68122 64780 77805 68715 67331 75153 75148 72625 85242 88641 72558 85454 52109 39149 51602 51015 53956 57070 67998 65722 78278 69449 70011 75927 76981 75796 85828 88635 69635 81151 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74754000 8972 498 8481 17069 13690 13690 1 9606 Homo sapiens 0.002567229064197818 FQELSQPR Unmodified 1003.5087 0.50869399 3273 O60271;O60271-4;O60271-2;O60271-3;O60271-5;O60271-9;A0A060L980;D6RHI8 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 0 5.5 0.5 1 1 43.714 43.8 2 0.0025947 11128 20230619_1886_Aki_TMTPro18x_K_F6 124.23 66.632 148100 118540 132780 142600 139970 152470 151140 145880 175870 170390 191740 192550 195640 164700 169960 209130 228640 199420 136810 108740 136320 142180 145170 153300 152530 150180 178380 171570 196130 193580 198380 173130 176720 208790 217990 189620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181440000 8973 3273 8482 17070;17071 13691;13692 13692 2 9606 Homo sapiens 0.007079992663761914 FQESEERPK Unmodified 1148.5462 0.54620171 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B0AZS1 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 0 1 4 0 1 36.174 36.22 3 0.00067823 8015 20230619_1883_Aki_TMTPro18x_K_F4 105.35 70.077 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8974 3544 8483 17072 13693 13693 1 9606 Homo sapiens -0.022129542586753814 FQETEFLSPPR Unmodified 1349.6616 0.66156582 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 5.5 0.5 1 1 55.806 55.875 3 0.00019189 16120 20230619_1885_Aki_TMTPro18x_K_F5 111.94 93.388 36214 32624 36799 34669 26442 38898 38745 41404 41336 35306 36196 33772 35529 30557 38784 39250 37742 42221 33511 29879 37179 34928 28686 39053 38450 41950 41731 35964 37348 34271 36441 32094 39328 39466 36152 40053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49440000 8975 3578 8484 17073;17074 13694 13694 1 9606 Homo sapiens 0.0007214987233510328 FQETEFLSPPRK Unmodified 1477.7565 0.75652884 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 1 1 0 1 52.022 52.022 3 0.00042737 15132 20230619_1880_Aki_TMTPro18x_K_F1 95.264 83.651 51607 43134 44592 52514 43133 54317 54438 51779 64182 62505 62178 61106 66073 59199 48414 80795 71497 70619 47673 39566 45920 52280 45301 54719 54525 53372 64756 62568 64028 62075 66520 62243 50996 80175 68178 67185 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19286000 8976 3578 8485 17075 13695 13695 1 9606 Homo sapiens 0.03676083343520986 FQETGFFK Unmodified 1002.4811 0.48108226 1231 O95630;A0A804HJ64;A0A804HL27;A0A140VK54;A0A804HKA6;A0A804HJS0;A0A804HHU9;A0A804HIJ2;A0A804HII8;A0A804HHV2;F5H5B9;A0A804HJC8;A0A804HKL2 STAMBP STAM-binding protein yes no 0 0 0 4.5 3.5 1 1 57.401 57.427 2 0.00070706 16745 20230619_1888_Aki_TMTPro18x_K_F8 157.91 102.47 131120 114760 116460 136690 123580 147030 142380 151640 173750 159030 157750 170890 162890 144970 154430 173030 180370 193560 121180 105230 119780 136380 128460 147980 143440 154760 174570 160690 162930 172030 165760 151880 158720 174520 172410 183580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60256000 8977 1231 8486 17076;17077 13696;13697 13697 2 9606 Homo sapiens -0.02005903993836 FQETSDEFEAAR Unmodified 1428.6157 0.61573784 1432 G8JLG1;A0A384MR33;Q14683;A0A6Q8PHC3;V9GY57 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 1.5 0.5 1 1 47.872 47.872 2 1.0315E-12 13471 20230619_1880_Aki_TMTPro18x_K_F1 203.8 181.79 87966 58785 68382 90505 65921 89612 75137 77075 104310 101980 106730 116260 120170 99272 82995 121380 110640 115740 81096 54114 71204 88698 69156 90321 76139 80303 104720 102180 109980 116780 120450 104120 86790 121200 105620 109970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99374000 8978 1432 8487 17078;17079 13698;13699 13698 2 9606 Homo sapiens -0.08142540100539009 FQEYHIQQNEALAAK Unmodified 1788.8795 0.87949752 378 A0A024R648;Q9Y5J7 TIMM9 Mitochondrial import inner membrane translocase subunit Tim9 yes no 0 0 0 6 0 1 48.787 48.865 3 1.0008E-10 13405 20230619_1886_Aki_TMTPro18x_K_F6 157.58 140.36 101940 73838 86348 108710 96639 101480 104510 91342 114260 114880 131100 113690 140790 101620 133000 146490 128090 145500 94077 67909 89297 106750 99775 102930 105210 94725 116530 114820 134030 115200 142870 107690 135190 146380 122720 138140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 411140000 8979 378 8488 17080 13700 13700 1 9606 Homo sapiens 0.01661295004191743 FQFDGDKK Unmodified 983.47125 0.47124585 3630 P52209-2;P52209;B4E2U0;B4DL86;B4DV68;A9Z1X1;K7ELN9 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 1 7 0.816 1 1 1 46.585 46.658 3 0.077608 12120 20230619_1888_Aki_TMTPro18x_K_F8 46.406 31.205 325420 244490 290120 290410 434660 442920 409950 386020 458770 398750 416810 381140 459680 374820 391570 480110 439250 383710 300490 224300 299830 291530 439200 435090 416070 398480 462920 402000 431230 387860 464500 392350 402480 475170 419430 365670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2841300000 8980 3630 8489 17081;17082;17083 13701 13701 1 9606 Homo sapiens -0.02115091999235119 FQGASNLTLSETQNGDVSEETMGSR Unmodified 2657.1875 0.18750237 4606 Q9NVP1;Q53TI6 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 0 0 3 0 1 54.088 54.14 3 2.2039E-24 15990 20230619_1882_Aki_TMTPro18x_K_F3 180.66 177.56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8981 4606 8490 17084 13702 13702 1 9606 Homo sapiens -0.07480387899113339 FQGEDTVVIASK Unmodified 1292.6612 0.66123147 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;Q6P164;Q66K46;Q2TA90 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 5 0 1 52.855 52.927 3 0.079804 15060 20230619_1885_Aki_TMTPro18x_K_F5 28.351 7.3984 199290 139360 156970 164560 124920 166080 157190 167480 230790 237280 249610 313400 294720 298690 209410 358420 375220 440020 183780 127880 162550 164190 133640 167820 158970 172890 231760 238430 257490 314150 295840 311620 224430 363270 357850 416830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162570000 8982 2727 8491 17085 13703 13703 1 9606 Homo sapiens 0.026607301524791183 FQGEDTVVIASKPYAFDR Unmodified 2042.0109 0.010905622 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;Q6P164;Q66K46;Q2TA90 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 1 7.5 0.5 1 1 56.796 56.852 3 0.023385 16539 20230619_1888_Aki_TMTPro18x_K_F8 51.819 40.54 37051 30701 39275 40963 29154 38233 36695 35281 36325 44924 44892 43908 43117 36463 46020 47098 38820 47142 34280 28189 39574 40484 31319 38785 36579 36523 37402 44835 45586 44369 44182 38425 46359 47158 37270 44745 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 342640000 8983 2727 8492 17086;17087 13704 13704 1 9606 Homo sapiens 0.031580605813815055 FQGFHVAEER Unmodified 1218.5782 0.57817054 1685 Q15147-4;A0A8J8Z831;A0A7P0MRI8;A0A8I5KQI1;A0A8I5KS50;A0A8I5KXD7;A0A8I5KRP3;A0A8I5QL35;A0A8I5KRK2;A0A8I5KR92;A0A8I5KX82;A0A8I5KPD4;A0A8I5QJ53;Q15147-5;Q15147;A0A8I5KXW3;A0A8I5KYY7;A0A8I5QJE7;A0A8I5KQ87;A0A8I5KPQ9;Q15147-2;A0A8I5KRA0;A0A8I5KW09;A0A8I5KX58 PLCB4 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 yes no 0 0 0 4.67 0.471 1 2 43.4 43.462 3 0.0021602 11047 20230619_1883_Aki_TMTPro18x_K_F4 75.695 47.589 123210 81060 113640 121050 138710 131430 143540 142630 172940 132910 154230 167280 163960 136900 126900 153870 158960 150980 113720 74596 116640 119070 142110 132380 145320 144690 173640 135940 159590 167210 165280 143090 131610 154140 151730 143460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86114000 8984 1685 8493 17088;17089;17090 13705;13706 13705 2 9606 Homo sapiens -0.022375417848707002 FQGQDTILDYTLR Unmodified 1568.7835 0.78347187 486 A0A024R819;A0A024R858;P36639;P36639-3;P36639-2;P36639-1 NUDT1 7,8-dihydro-8-oxoguanine triphosphatase yes no 0 0 0 6.5 0.5 1 1 61.654 61.701 2 7.1282E-23 18537 20230619_1887_Aki_TMTPro18x_K_F7 264.84 218.38 177770 139350 155270 170410 132870 159390 162590 156930 163470 208180 214090 205250 219010 197170 196740 231160 212300 236930 164160 127860 159360 169410 140710 161950 162330 161910 168670 207480 217430 208270 222360 205420 201510 231970 203150 224890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 360960000 8985 486 8494 17091;17092 13707 13707 1 9606 Homo sapiens 0.021831471640325617 FQGQTCEMCQTCLGVCAEHK Unmodified 2442.9847 0.9847257 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 0 6 0 1 48.183 48.262 3 4.5285E-12 13148 20230619_1886_Aki_TMTPro18x_K_F6 142.88 134.59 10492 9662.3 9951.5 9633.1 9360.1 11728 11852 9330.5 12221 12888 10666 12708 13100 10304 10182 14785 11943 10142 9705 8844.1 10146 9763.8 9846.1 11649 11811 9799.5 12378 12830 11136 12821 13151 10941 10527 14513 11397 9689.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33357000 8986 1647 8495 17093 13708 13708 1 9606 Homo sapiens -0.17904727302220635 FQGVSLPVHLR Unmodified 1251.7088 0.70879078 4631 Q9NYK5-2;Q9NYK5;C9JG87 MRPL39 39S ribosomal protein L39, mitochondrial yes no 0 0 0 4.5 0.5 1 1 52.996 53.042 3 2.131E-12 15380 20230619_1883_Aki_TMTPro18x_K_F4 162.21 137.35 34988 27646 30074 32514 35672 40053 36042 38091 48603 38274 36501 39544 46132 34183 39075 43648 42500 43897 32308 25356 31059 32538 36660 39885 36699 39041 48311 38732 38457 39905 46415 35963 40072 43710 40641 41686 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137670000 8987 4631 8496 17094;17095 13709 13709 1 9606 Homo sapiens 0.09300473933967623 FQHYPHIK Unmodified 1068.5505 0.55049923 801 A0A087WT20;Q9NV06 DCAF13 DDB1- and CUL4-associated factor 13 yes no 0 0 0 2.5 0.5 1 1 39.384 39.445 4 0.0044427 9376 20230619_1882_Aki_TMTPro18x_K_F3 98.458 68.985 103140 59917 88635 100650 106930 100280 114500 108270 139710 109900 118440 117250 117210 105930 96849 128080 123420 119330 95090 55256 91580 98239 109750 101610 115740 110130 139960 111260 122440 118360 118780 110770 100480 127770 117810 113450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125010000 8988 801 8497 17096;17097 13710 13710 1 9606 Homo sapiens 0.018965997455325123 FQIATVTEK Unmodified 1035.5601 0.56006086 1228 P28070;A0A140VK46 PSMB4 Proteasome subunit beta type-4 yes no 0 0 0 8 0 1 53.394 53.469 3 0.0085536 15035 20230619_1888_Aki_TMTPro18x_K_F8 70.496 50.709 105300 93096 109910 123290 112140 166000 117400 129780 467090 135190 135280 143690 161020 131170 140410 151970 150000 153430 97449 85452 111430 122520 117550 163640 128490 135180 441650 137480 155400 145060 162690 136840 143730 152440 143450 145700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138570000 8989 1228 8498 17098 13711 13711 1 9606 Homo sapiens 0.043703232404368464 FQIEANFPR Unmodified 1120.5665 0.56654322 4333 Q96CS3 FAF2 FAS-associated factor 2 yes yes 0 0 0 8 0 1 55.236 55.298 2 0.0014467 15854 20230619_1888_Aki_TMTPro18x_K_F8 115.71 91.379 197980 153840 169770 200300 196510 204580 215430 208400 229850 231760 226360 229250 255840 224590 230310 261880 241250 285350 182800 141250 175390 198480 202460 206660 216530 213290 233310 232910 233740 232720 259020 233820 235440 263790 231030 270620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158340000 8990 4333 8499 17099 13712 13712 1 9606 Homo sapiens 0.011082611918027396 FQIPPNAELK Unmodified 1155.6288 0.62880913 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 3.67 3.09 1 1 1 55.875 55.875 3 0.0012604 16787 20230619_1880_Aki_TMTPro18x_K_F1 91.549 64.024 54800 48844 53301 60989 48605 56800 52336 55763 56537 66334 67169 65319 70756 59650 65997 73688 66220 84550 50689 44804 54243 60533 50987 57729 52726 57329 57836 66421 68564 66180 71860 62488 67257 74402 63484 80123 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61768000 8991 3789 8500 17100;17101;17102 13713;13714;13715 13713 3 9606 Homo sapiens 0.05721987540118789 FQIQDISVETEDNK Unmodified 1664.7893 0.78934511 2337;3778;3779;859 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;A4QPE4;Q01082-2;Q01082-3;A0A087WYQ1;O15020-2;O15020 SPTBN1;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, non-erythrocytic 2 no no 0 0 0 3 1 1 1 58.467 58.475 3 1.4008E-05 17991 20230619_1881_Aki_TMTPro18x_K_F2 115.68 98.463 104470 90210 97886 104070 89347 119580 118010 109340 138580 117280 129380 123120 127040 112310 119840 137260 139780 138110 96581 82695 99932 104180 94448 119470 117930 112650 139550 118340 133030 124420 129450 117510 123180 137530 133530 131180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 505890000 8992 2337;3778;3779;859 8501 17103;17104 13716;13717;13718 13717 3 9606 Homo sapiens -0.016457991149763984 FQLLEGPPESMGR Oxidation (M) 1475.7079 0.70786408 1080 A0A0S2Z3X8;P31150;B4DHX4;B4DH24;G5E9U5;A0A0S2Z426 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 1 0 5.5 0.5 1 1 55.805 55.875 2 0.053518 16225 20230619_1885_Aki_TMTPro18x_K_F5 58.754 44.979 60155 54568 69784 71685 62300 63873 69421 63801 69106 73714 81844 73243 86129 62737 86314 78425 76648 89252 55735 50079 69979 70886 65411 65196 69605 65492 70947 73937 83524 74058 87678 65966 87194 79184 73517 84611 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58907000 8993 1080 8502 17105;17106 13719 13719 644 1 9606 Homo sapiens -0.010961532879036895 FQLLEGPPESMGR Unmodified 1459.7129 0.71294946 1080 A0A0S2Z3X8;P31150;B4DHX4;B4DH24;G5E9U5;A0A0S2Z426 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 6.67 0.471 1 2 59.639 59.69 2;3 3.1711E-07 17677 20230619_1887_Aki_TMTPro18x_K_F7 147.62 129.46 63397 62084 72681 72303 50725 58732 59074 62451 70693 73755 68147 73803 73181 60699 90377 67898 64751 70870 58765 56893 72718 72033 54662 60524 59502 63868 71299 73917 70346 74424 75304 63440 90062 68363 62243 67258 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81842000 8994 1080 8502 17107;17108;17109 13720;13721 13721 2 9606 Homo sapiens 0.0014815057470514148 FQLQATTK Unmodified 935.50763 0.50763136 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 2 0 1 48.374 48.445 2 0.0058097 13726 20230619_1881_Aki_TMTPro18x_K_F2 112.41 79.015 172430 133560 154440 160910 99966 122940 151450 148690 188730 131900 151440 103500 130450 109670 154400 142970 134080 92149 159250 122540 157610 159830 109720 127780 150910 149740 188370 133440 155930 106820 134930 114630 155390 140370 128200 88216 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111510000 8995 2005 8503 17110 13722 13722 1 9606 Homo sapiens 0.03729784897450372 FQLQHER Unmodified 956.48281 0.48281359 4036 Q8NBT6;Q5JPC1;Q9HC21-2;Q9HC21;J3KSB1;J3KSI7;J3QL84;J3KS44;J3QLV3;J3KRY6 DKFZp667O1614;SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes no 0 0 0 6 0 1 34.297 34.344 3 3.7981E-05 7379 20230619_1886_Aki_TMTPro18x_K_F6 133.79 110.23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8996 4036 8504 17111 13723 13723 1 9606 Homo sapiens 0.0028314981475432432 FQLTDCQIYEVLSVIR Unmodified 1983.0135 0.013548159 1284;4185 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q86U75 DPYSL2 Dihydropyrimidinase-related protein 2 no no 0 0 0 2 0 1 66.354 66.361 3 1.7583E-06 21359 20230619_1881_Aki_TMTPro18x_K_F2 118.21 108.04 4239.2 3066.8 2071.1 2773.6 3200.3 3153.1 2915.3 2835.7 3416.9 3824.3 3471.5 4637.8 3606 3849.3 4344.9 3521.3 2681 3919.8 3900.4 2807.6 2304.6 2831.6 3230.8 3156.1 2970.4 2945.8 3458.8 3836.1 3575.2 4637.3 3714.2 3975.5 4309.4 3569.9 2589.8 3714.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4611700 8997 1284;4185 8505 17112 13724 13724 1 9606 Homo sapiens 0.061361927146435846 FQMAYSNLLR Oxidation (M) 1257.6176 0.61759251 3560 P37108 SRP14 Signal recognition particle 14 kDa protein yes yes 0 1 0 4 0 1 55.072 55.084 2 0.0015484 16248 20230619_1883_Aki_TMTPro18x_K_F4 98.044 78.054 187980 186490 159160 154730 292120 326720 238620 238960 324770 29556 22968 28213 31279 27070 100950 31726 29617 27146 173830 170430 166080 161240 291740 315370 246000 244440 313080 41702 38327 28840 35071 28200 97103 31778 29009 25841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123880000 8998 3560 8506 17113 13725 13725 2225 1 9606 Homo sapiens -0.0009115782565913833 FQMAYSNLLR Unmodified 1241.6227 0.62267789 3560 P37108 SRP14 Signal recognition particle 14 kDa protein yes yes 0 0 0 5 0.816 1 1 1 60.172 60.211 2 1.5366E-05 17953 20230619_1885_Aki_TMTPro18x_K_F5 162.88 116.45 309830 294220 291240 282200 363080 533600 377580 394810 530660 128650 122720 110710 125770 105820 196420 128880 136080 125780 286640 269200 298640 289370 373220 516990 384230 405560 514350 144650 145320 113330 131780 110560 194780 129190 130710 119540 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 335470000 8999 3560 8506 17114;17115;17116 13726 13726 1 9606 Homo sapiens 0.0115314603697243 FQMPDQGMTSADDFFQGTK 2 Oxidation (M) 2181.8983 0.89831998 1284;4185 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;E5RFU4;Q86U75 DPYSL2 Dihydropyrimidinase-related protein 2 no no 0 2 0 4 0.816 1 1 1 57.724 57.755 3 2.7163E-10 16955 20230619_1885_Aki_TMTPro18x_K_F5 123 106.7 113140 91189 103520 116450 118390 97046 105390 107130 108220 116590 149150 121370 135440 110380 135960 139890 124610 142680 104530 83698 106200 115280 121190 99941 107180 109050 111730 117430 150320 122790 138610 115810 137650 140250 119460 135420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 348940000 9000 1284;4185 8507 17117;17118;17119 13727;13728 13728 806;807 2 9606 Homo sapiens -0.14535324269309058 FQMPDQGMTSADDFFQGTK Oxidation (M) 2165.9034 0.90340536 1284;4185 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;E5RFU4;Q86U75 DPYSL2 Dihydropyrimidinase-related protein 2 no no 0 1 0 6 0.816 1 1 1 61.147 61.199 3 4.2591E-21 18617 20230619_1886_Aki_TMTPro18x_K_F6 193.72 177.03 535310 485820 625160 557640 560080 646720 691540 646290 880850 484160 559880 488890 465060 481580 491130 519050 478700 533060 496010 445250 626310 558790 590650 647170 695240 656050 872210 499010 584950 496360 479610 498640 498470 521770 458510 505950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 905610000 9001 1284;4185 8507 17120;17121;17122 13729;13730;13731 13730 806;807 3 9606 Homo sapiens -0.1329102040667749 FQMPDQGMTSADDFFQGTK Unmodified 2149.9085 0.90849074 1284;4185 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;E5RFU4;Q86U75 DPYSL2 Dihydropyrimidinase-related protein 2 no no 0 0 0 6.5 0.5 1 1 62.79 62.833 3 2.7458E-39 19079 20230619_1887_Aki_TMTPro18x_K_F7 246.42 231.27 476270 404110 463260 478790 297350 467140 462510 481310 499070 603840 558040 625840 637950 560030 593910 688640 643650 724480 440390 370560 469450 477380 327530 473300 458220 494010 509200 604120 573810 631910 646610 586650 608000 691670 615920 687440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3392699999.9999995 9002 1284;4185 8507 17123;17124 13732 13732 1 9606 Homo sapiens -0.12046716544091396 FQMQVLPQCGHAVHEDAPDK Oxidation (M) 2322.0521 0.052135285 1224 A0A140VK39;Q9Y570;Q9Y570-4;Q9Y570-2;Q9Y570-3 PPME1 Protein phosphatase methylesterase 1 yes no 0 1 0 5 0.816 1 1 1 42.639 42.713 4 0.00011346 10740 20230619_1883_Aki_TMTPro18x_K_F4 83.776 75.386 44287 35813 42877 41911 43850 45084 45337 46011 50448 54530 60538 54618 59384 48913 53728 58560 56949 57230 40937 32842 43675 41885 45489 45388 45807 47163 51523 54646 61543 55275 60357 51161 54939 58608 54459 54370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152820000 9003 1224 8508 17125;17126;17127 13733;13734 13733 761 2 9606 Homo sapiens -0.05600869713043721 FQNCSVLPGGVYVSETQNR Unmodified 2154.0164 0.016401706 1809 A0A8V8NBT1;Q12769;G3V198;E9PR16;A0A8Q3WK58;Q12769-2 NUP160 Nuclear pore complex protein Nup160 yes no 0 0 0 4.5 3.5 1 1 55.657 55.719 2;3 9.3955E-06 16734 20230619_1880_Aki_TMTPro18x_K_F1 116.84 88.511 38355 32699 43752 42759 39707 44813 45548 44162 45753 42050 48613 43315 49268 38072 42960 48905 46519 48819 35516 30014 43931 42387 41703 45138 45611 45114 46695 42651 49734 43778 49934 40037 44026 48948 44490 46361 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33364000 9004 1809 8509 17128;17129 13735;13736 13735 2 9606 Homo sapiens -0.014445838984556758 FQNVNSVTIFVQSNQGEEETTR Unmodified 2526.1987 0.19865941 2268 V9HW51;B2R960;O43396;Q59G46;K7ER96;B3KT45;K7EME7 HEL-S-114;TXNL1 Thioredoxin-like protein 1 yes no 0 0 0 5.5 0.5 1 1 59.623 59.681 3 7.1355E-56 18005 20230619_1886_Aki_TMTPro18x_K_F6 277.07 263.34 27859 19384 24450 23785 23970 26508 24599 23577 27296 22214 26922 24950 27150 21944 27551 29859 26183 26985 25710 17795 25107 23699 24964 26532 24857 24260 27621 22618 27642 25131 27711 23151 27947 29711 25070 25658 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51532000 9005 2268 8510 17130;17131 13737;13738 13738 2 9606 Homo sapiens -0.003391977426417725 FQPGVLEAP Unmodified 956.49673 0.49673232 3185 Q8NHX0;L7RXH5;P27361-2;P27361;E9PBK7;Q7Z3H5;Q9BWJ1;H0YEX6;B3KR49 MAPK3;DKFZp686O0215 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 0 0 0 4 0 1 61.067 61.07 2 0.038249 18757 20230619_1883_Aki_TMTPro18x_K_F4 80.229 65.453 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9006 3185 8511 17132 13739 13739 1 9606 Homo sapiens 0.01674382523174245 FQPLFGDFAAEK Unmodified 1368.6714 0.67140222 3912 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog yes yes 0 0 0 7.5 0.5 1 1 63.088 63.117 3 3.232E-07 19134 20230619_1888_Aki_TMTPro18x_K_F8 158.01 137.89 144440 130240 135380 144140 154580 181550 148230 150280 147700 165890 158140 150260 191580 145360 156350 211940 161620 175380 133570 119320 138620 144930 158960 180040 149860 156070 151100 166340 163160 153230 192660 153670 160220 209690 154680 166920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 447000000 9007 3912 8512 17133;17134 13740 13740 1 9606 Homo sapiens 0.001813378777114849 FQQQQGLR Unmodified 1003.5199 0.51992738 2124 A8K9T9;A8K8N7;O15067 PFAS Phosphoribosylformylglycinamidine synthase yes no 0 0 0 5.33 3.09 1 1 1 37.25 37.243 2 0.00026953 8892 20230619_1880_Aki_TMTPro18x_K_F1 167.82 129.02 251290 157440 225690 228410 262450 284010 245840 248700 322000 208880 230060 190360 202650 176440 235850 173510 267390 185180 231830 144870 231930 225490 269410 282090 251160 255420 319690 212940 238960 193720 209390 182340 240590 175300 254960 176060 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 134490000 9008 2124 8513 17135;17136;17137 13741;13742;13743;13744 13741 4 9606 Homo sapiens 0.0183082136052235 FQQVPTDALANK Unmodified 1330.6881 0.68811492 4130 Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A8I5KSP1;A0A0B4J210;E5RH50;H0YC33 LARP1 La-related protein 1 yes no 0 0 0 8 0 1 53.169 53.243 3 7.4334E-05 14940 20230619_1888_Aki_TMTPro18x_K_F8 90.434 75.534 197370 164300 181310 215160 172820 200660 190450 197620 218800 249690 238100 228250 265740 228700 221190 286540 246910 231490 182400 150830 185590 212860 180810 203920 191970 203510 222280 248880 244490 232800 268240 238880 227490 283770 235890 220510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 428560000 9009 4130 8514 17138 13745 13745 1 9606 Homo sapiens 0.035998387636709595 FQRPGDPQSAQDK Unmodified 1472.7008 0.70080487 322;3094 H7C561;Q15637-6;A0A024R566;B4DJU4;Q15637;Q15637-2;Q15637-3;Q15637-4;A0A024R572;A0A024R588;A0A024R5D9;B4DSE4;Q15637-5;A0A7P0T9U7;Q15637-7;B4DX42 SF1 Splicing factor 1 no no 0 0 1 5 0 1 37.616 37.708 3 0.0018317 8574 20230619_1885_Aki_TMTPro18x_K_F5 80.746 54.627 31343 19056 25308 30417 40515 34161 31113 27071 38358 32305 42670 44197 42581 35091 35669 43494 46973 44059 28889 17558 26454 29805 40571 34114 32129 28311 38821 32749 43572 44031 43134 36937 37058 43582 44814 41853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48482000 9010 3094;322 8515 17139 13746 13746 1 9606 Homo sapiens -0.01663749844101403 FQSDSSSYPTVDSNSLLGQSR Unmodified 2274.04 0.040033499 1230 Q9UQ35;A0A140VK53;O60382;Q9UQ35-2 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 6.5 0.5 1 1 55.729 55.797 3 8.3925E-37 16377 20230619_1886_Aki_TMTPro18x_K_F6 219.99 214.55 88777 72589 82751 96851 80942 104980 102230 90255 109020 118610 112600 125230 122040 100890 108150 124900 120090 141310 82043 66653 84651 95877 84917 105150 102030 94031 110890 118550 115860 125940 123580 106190 110980 125990 114940 133960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 289780000 9011 1230 8516 17140;17141 13747;13748 13747 2 9606 Homo sapiens -0.046024916508940805 FQSISTEFLALMK Unmodified 1513.7851 0.78505177 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3 0 1 66.004 66.04 3 0.085924 20968 20230619_1882_Aki_TMTPro18x_K_F3 37.146 22.455 6666.1 5834.5 6413.7 6353.3 5182.1 7444.3 6718.6 6767.3 9265.4 6988.4 9979.5 12086 10143 8992.7 7245.3 10689 11131 14432 6164.7 5345.4 6519.6 6390.6 5540.1 7426.7 6765.8 6969.1 9309.1 7209.7 10221 11931 10215 9468 7653.2 10912 10635 13656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19411000 9012 3881 8517 17142 13749 13749 1 9606 Homo sapiens 0.048710649284430474 FQSIVIGCALEDQK Unmodified 1606.8025 0.80249275 2340 B3KN59;B3KM36;O95816-2;O95816 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 0 7.5 0.5 1 1 61.983 62.016 3 0.0033469 18734 20230619_1887_Aki_TMTPro18x_K_F7 56.514 45.88 48721 39310 43799 53375 47566 61338 46569 53156 59249 67935 60655 59408 60275 63680 50383 73142 70602 75731 45010 36104 45022 52821 49188 61201 47431 55239 59765 67612 62126 60848 61167 66008 52652 73424 67391 71883 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166800000 9013 2340 8518 17143;17144 13750 13750 1 9606 Homo sapiens 0.02336360463436904 FQSLGVAFYR Unmodified 1186.6135 0.61349341 1257 A0A158RFU6;P51149;A0A6Q8PG52;A0A6Q8PH84;C9J8S3;A0A6Q8PGE6;B4DPH9;C9J592;C9IZZ0 RAB7A Ras-related protein Rab-7a yes no 0 0 0 5.5 0.5 1 1 60.323 60.377 2 1.4312E-06 18031 20230619_1885_Aki_TMTPro18x_K_F5 173.37 153.89 793870 674540 668950 770570 665590 756270 768260 762590 874660 580280 537590 518990 559540 487950 736480 606330 647290 550710 733290 618330 690520 770250 694950 766050 771790 773960 870800 594880 568780 528930 579000 510550 740100 604770 619510 524010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 985300000 9014 1257 8519 17145;17146 13751;13752 13751 2 9606 Homo sapiens 0.027651207429244096 FQSQADQDQQASGLQSPPSR Unmodified 2173.9988 0.99883739 4647 Q9P2B4;Q9NPX3 CTTNBP2NL;DKFZp547A023 CTTNBP2 N-terminal-like protein yes no 0 0 0 4 0 1 42.629 42.673 3 4.6932E-16 10707 20230619_1883_Aki_TMTPro18x_K_F4 151.96 136.87 14700 13049 18128 17173 16653 17033 15541 17807 23164 32980 44367 61887 55448 52407 44993 28045 46150 67099 13626 11977 18097 17006 17380 17259 16001 18552 24043 33379 45116 61073 55755 53102 45907 30822 44290 63241 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26364000 9015 4647 8520 17147 13753;13754 13753 2 9606 Homo sapiens -0.041202078997230274 FQTEDDAR Unmodified 980.41994 0.41993856 1039 A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160;Q14160-3;A0A0G2JMS7;Q14160-2 SCRIB Protein scribble homolog yes no 0 0 0 1 0 1 35.676 35.676 2 0.034376 8265 20230619_1880_Aki_TMTPro18x_K_F1 76.17 60.73 54171 25105 59557 50961 56808 56724 42210 34927 37389 30528 45131 50003 43152 39689 42596 21836 55966 47278 49996 23249 59929 49372 58760 56401 43309 37134 38655 31710 45897 49475 44105 40349 43938 23729 53359 44668 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41286000 9016 1039 8521 17148 13755 13755 1 9606 Homo sapiens -0.07105460763943938 FQTEIQTVNK Unmodified 1206.6245 0.62445203 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 7 0.816 1 1 1 49.96 50.038 3 0.030072 13917 20230619_1886_Aki_TMTPro18x_K_F6 55.721 31.43 70618 65453 81907 85747 96202 92359 102730 90823 103020 91379 91016 88971 87543 76173 101790 99934 94452 96386 65439 60062 82501 85009 98797 92887 103180 92943 104440 92264 93834 90026 90146 80245 102850 99853 90455 91578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 885480000 9017 1207 8522 17149;17150;17151 13756 13756 1 9606 Homo sapiens 0.029404783265590595 FQTLQTSK Unmodified 951.50255 0.50254598 4534 Q9H8H0 NOL11 Nucleolar protein 11 yes yes 0 0 0 2 0 1 46.931 47.007 2 0.002618 13110 20230619_1881_Aki_TMTPro18x_K_F2 123.86 85.068 39985 29046 33935 37684 38812 46594 40220 41562 53285 33149 39686 35725 38854 49738 55976 35694 39459 32543 36901 26675 35077 37454 40035 46306 40866 42578 52927 34101 41333 36650 40597 50018 55591 36007 37866 30969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51155000 9018 4534 8523 17152 13757 13757 1 9606 Homo sapiens 0.0248548103485291 FQTLVAQAVDK Unmodified 1218.6608 0.66083754 4744 Q9Y586;F1T0A2;B2R805;Q13394 MAB21L2;MAB21L1 Protein mab-21-like 2;Protein mab-21-like 1 yes no 0 0 0 1.5 0.5 1 1 61.65 61.655 3 0.00031481 19279 20230619_1881_Aki_TMTPro18x_K_F2 101.39 82.292 75914 57285 74921 66410 56037 59391 56714 74489 70040 71687 71790 69134 59753 69652 83345 80061 79727 75900 70154 52542 75829 66290 59727 60956 57667 74932 70682 72498 73076 70350 62620 72293 84119 80075 76290 72148 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1683499999.9999998 9019 4744 8524 17153;17154 13758;13759 13759 2 9606 Homo sapiens 0.06025355223277984 FQTMEEK Oxidation (M) 927.40078 0.40078303 3567;2399 B3KS36;P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;Q49AJ9 RPL3;rpl3 60S ribosomal protein L3 no no 0 1 0 3.5 0.5 1 1 40.38 40.43 2 0.022031 9770 20230619_1882_Aki_TMTPro18x_K_F3 95.741 29.604 393070 257820 359890 402170 462760 489040 439650 459830 554580 398670 482800 435750 456450 396860 424250 390710 544990 432200 362750 237390 370130 395190 471990 487080 448140 470070 555040 407650 497220 439550 465380 410340 438390 395230 519490 410480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 362700000 9020 2399;3567 8525 17155;17156 13760;13761 13760 1478 2 9606 Homo sapiens -0.06582133379208699 FQTMEEK Unmodified 911.40587 0.4058684 3567;2399 B3KS36;P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;Q49AJ9 RPL3;rpl3 60S ribosomal protein L3 no no 0 0 0 3.5 0.5 2 2 46.304 46.364 2;3 0.0041733 12480 20230619_1882_Aki_TMTPro18x_K_F3 150.05 93.543 816160 572280 726280 806560 757050 981760 841930 864810 1171900 951310 916680 995120 1225200 956850 773270 1310000 1308500 1150200 753320 526140 746400 797210 788180 976140 854000 893750 1164800 958880 965930 1007400 1219400 1007100 826670 1300200 1245700 1094800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1074100000 9021 2399;3567 8525 17157;17158;17159;17160 13762;13763 13762 2 9606 Homo sapiens -0.05337829516599868 FQTMSDQIIGR Unmodified 1294.634 0.63397086 1772 A0A8I5KTJ3;A0A8I5KYC9;O75506 HSBP1 Heat shock factor-binding protein 1 yes no 0 0 0 4.5 3.5 1 1 54.002 54.074 2 7.2479E-07 16046 20230619_1880_Aki_TMTPro18x_K_F1 157.38 135.29 76873 60065 69732 71662 52573 84516 62973 66475 101220 98353 86389 101690 122830 113350 83488 140470 127070 126100 71008 55099 71205 71583 56555 84018 64099 70002 100420 97869 90980 103490 122460 117910 88305 139740 121150 119930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66655000 9022 1772 8526 17161;17162 13764;13765 13764 2 9606 Homo sapiens -0.0015607665957304562 FQTQVDRR Unmodified 1048.5414 0.5413911 1459 A0A384NKK8;J3QL71;Q96FV2-2;Q96FV2 SCRN2 Secernin-2 yes no 0 0 1 8 0 1 32.452 32.452 3 0.0085989 6509 20230619_1888_Aki_TMTPro18x_K_F8 83.429 52.859 41057 28150 42818 39733 56114 49260 51999 54077 57768 48391 56939 63115 56215 52516 54958 54159 66404 62815 37939 25883 43518 39308 57017 49217 52851 54745 58466 49661 58476 63030 57381 54588 56531 54893 63399 59583 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14093000 9023 1459 8527 17163 13766 13766 1 9606 Homo sapiens 0.01906206389230647 FQVDPSGEIVELAK Unmodified 1530.793 0.79297392 4544 Q9HB07;F8VR84;Q8WYI2;F8VQQ3;Q96CT6 C12orf10;MST024 UPF0160 protein MYG1, mitochondrial yes no 0 0 0 4 0 1 62.213 62.218 3 0.01737 19287 20230619_1883_Aki_TMTPro18x_K_F4 59.68 34.825 29550 21034 28403 28560 25337 27605 27530 26436 30799 32595 34826 40492 36085 31799 32931 35316 38820 41203 27293 19329 28899 28211 26622 27960 27746 27268 31363 32845 35635 40427 36649 33272 33880 35757 37102 39064 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43842000 9024 4544 8528 17164 13767 13767 1 9606 Homo sapiens 0.04880915449552958 FQVENSNR Unmodified 992.46756 0.46755746 2768 CON__ENSEMBL:ENSBTAP00000024146 yes yes 0 0 0 4.5 0.5 1 1 37.022 37.065 2 0.001916 8325 20230619_1885_Aki_TMTPro18x_K_F5 111.95 89.71 + 13246 12898 22420 16640 57337 63471 33012 37605 49562 16772 29002 37484 20619 20927 29595 16889 30202 37744 12333 11832 22505 17089 56151 60011 35181 39594 48631 18770 30424 36524 21772 21919 29901 18242 28943 35601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30308000 9025 2768 8529 17165;17166 13768;13769 13769 2 9606 Homo sapiens -0.02897761773090224 FRDGPPLR Unmodified 956.5192 0.5191991 3913;3914 Q15056;A0A7I2V4E4;A0A7I2V3E4;Q75MT8;A0A7I2V3D5;Q15056-2;A0A7I2V385 EIF4H;WBSCR1 Eukaryotic translation initiation factor 4H no no 0 0 1 3.67 3.09 1 1 1 36.874 36.889 3 0.00084858 8223 20230619_1888_Aki_TMTPro18x_K_F8 120.15 57.608 319570 255330 283470 279170 301340 318760 301480 289040 330170 343200 357620 352670 399370 302350 317450 380600 377750 318590 295180 234010 291160 280620 311590 318800 304930 298810 336010 344230 367350 355940 402140 317740 327890 377610 360440 303480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 443440000 9026 3913;3914 8530 17167;17168;17169 13770;13771 13771 2 9606 Homo sapiens 0.03920026711477931 FRDPDLR Unmodified 917.47191 0.47191456 894 O43251-4;O43251-10;O43251-5;Q9NWB1-3;F8VZG9;A0A8Q3WKT3;Q9NWB1-2;F8WSN4;J3KNW3;B0QYY4;B7ZLH9;B7Z1U7;I3L1D4;A0A6Q8PH77;A0A087X2B1;A0A804HJM2;A0A994J531;A0A0G2JRA5;X5DNY3;A0A8Q3SI58;X5D7T5;X5DP44;O43251-2;A0A6Q8PFM4;O43251-7;Q8TCM0;S4R469;A0A804HKG7;A0A6Q8PHA3;A0A6Q8PGE0;B0QYV1;F8VZY7;A0A286YEU2;F8VR27;O43251-6;O43251-8;Q59HD3;O43251-9;Q9NWB1;Q9NWB1-5;Q9NWB1-4;O43251;A0A8Q3SI75;A0A8Q3SI19;A0A0G2JSB3;J3QRF4;A0A8I5KWJ3;F8VRS4;O43251-3;A6NFN3-2;A6NFN3;A0A3B3ITL7;B0QYY7;A0A8Q3SI31;A0A8Q3SI20;J3QQZ2;B0QYY6 RBFOX2;RBFOX1;A2BP1;DKFZp547L059;RBFOX3 RNA binding protein fox-1 homolog 2;RNA binding protein fox-1 homolog 1;RNA binding protein fox-1 homolog;RNA binding protein fox-1 homolog 3 yes no 0 0 1 4.5 0.5 1 1 37.303 37.371 3 0.013469 8406 20230619_1885_Aki_TMTPro18x_K_F5 89.298 32.195 246290 217910 223430 241060 279680 292200 302700 295260 338340 308530 330920 307720 326940 266090 296850 313110 348610 308620 227680 199660 229840 242300 286590 291770 304890 301730 342290 311110 339530 311100 332340 278400 305310 313630 332770 293320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 292380000 9027 894 8531 17170;17171 13772;13773 13773 2 9606 Homo sapiens 0.009877474404675013 FRDQDLASCDR Unmodified 1381.6045 0.60446165 4715 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1;B3KSP8 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 0 0 1 3 0.816 1 1 1 36.977 37.029 3 6.8366E-10 8383 20230619_1882_Aki_TMTPro18x_K_F3 191.29 167.44 77397 50888 61903 75038 69136 87550 83570 73804 95830 85520 95719 83902 105790 78734 74427 101900 100230 92319 71360 46823 64385 73903 71764 87210 83763 76691 96889 85801 98531 85154 106100 82654 77806 101410 95595 87815 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135290000 9028 4715 8532 17172;17173;17174 13774 13774 1 9606 Homo sapiens -0.07107640675735638 FRDQDLASCDRDR Unmodified 1652.7325 0.73251571 4715 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1;B3KSP8 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 0 0 2 3 0 1 34.103 34.169 3 6.3868E-06 7244 20230619_1882_Aki_TMTPro18x_K_F3 138.42 108.62 17511 14361 18574 17370 14590 16769 17206 15673 20260 18291 20540 21264 19628 20112 21792 24857 23484 22741 16200 13173 18711 17293 15546 16980 17299 16169 20468 18444 21032 21422 20191 21013 22232 24777 22448 21625 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27510000 9029 4715 8533 17175 13775 13775 1 9606 Homo sapiens -0.06774125152492161 FRDVYDYFR Unmodified 1279.5986 0.59857163 2821 E9PQP6;D3DSY9;P49354;H0YCW1 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha yes no 0 0 1 2 0 1 55.647 55.667 3 0.0002826 16839 20230619_1881_Aki_TMTPro18x_K_F2 109.79 59.666 41408 37995 33883 34463 37389 48971 34644 36586 59050 15774 11833 11792 14133 9938.1 20713 19463 18477 13974 38260 34752 35105 35307 38619 48136 35815 37668 56763 17037 14473 12121 14678 10821 20815 19101 17669 13348 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13023000 9030 2821 8534 17176 13776 13776 1 9606 Homo sapiens -0.030043711250755223 FREALGDAQQSVR Unmodified 1475.7481 0.74808942 1609 Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2;K7EIH8;K7ER44;K7EK03;K7EPP7;K7ESP1;K7ELJ8;K7EJV7;K7EN19;K7EJL5;K7EJE9;A0A6I8PR93 DNAJC7 DnaJ homolog subfamily C member 7 yes no 0 0 1 6.5 0.5 1 1 43.015 43.102 3 6.0656E-11 10519 20230619_1887_Aki_TMTPro18x_K_F7 182.03 165.63 86856 76668 76168 80379 89543 93480 88815 89076 97709 90188 83456 74247 87980 66202 85699 98039 81289 74767 80271 70216 78482 81080 91919 93481 89866 91315 98498 90614 86448 75890 89481 70257 87010 96674 77774 71285 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 260310000 9031 1609 8535 17177;17178 13777 13777 1 9606 Homo sapiens 0.02924529426877598 FREDHPDLIQNAK Unmodified 1581.79 0.78995423 2929 E9PKP7;P17480-2;P17480;A0A994J4N4;A8K962;B4DNQ1;O00164;Q05BZ1 UBTF Nucleolar transcription factor 1 yes no 0 0 1 5 0 1 42.284 42.367 3 0.0021171 10498 20230619_1885_Aki_TMTPro18x_K_F5 84.173 37.467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9032 2929 8536 17179 13778 13778 1 9606 Homo sapiens 0.022330851154265474 FREEPGCCVAVHCVAGLGR Unmodified 2172.9979 0.99793165 3826 Q12974-3;Q12974;Q12974-4 PTP4A2 Protein tyrosine phosphatase type IVA 2 yes no 0 0 1 8 0 1 43.984 44.002 3 0.00015088 11104 20230619_1888_Aki_TMTPro18x_K_F8 79.311 73.782 10824 7937.9 8922.9 11092 8807 9205.9 9055.4 10621 11525 11225 12193 12696 11048 9118.8 10110 13052 11891 12754 9987.2 7295.7 9231.4 10915 9168.9 9484.2 9199.6 10769 11627 11352 12430 12702 11267 9731.6 10412 13027 11366 12114 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10379000 9033 3826 8537 17180 13779 13779 1 9606 Homo sapiens -0.041647403456863685 FREILLR Unmodified 945.57599 0.5759857 3326 O76038 SCGN Secretagogin yes yes 0 0 1 4 0 1 47.302 47.344 3 0.024606 12766 20230619_1883_Aki_TMTPro18x_K_F4 80.229 17.571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9034 3326 8538 17181 13780 13780 1 9606 Homo sapiens 0.1010207426800207 FREIQQELSSGR Unmodified 1448.7372 0.73719038 3474 P18583-5;P18583-9;P18583;P18583-7;P18583-4;P18583-3;P18583-10;P18583-6;P18583-2;A0A994J4Y9;A0A8Q3SI10;Q6ZRV7;J3QSZ5;D3DSF7;A0JLP4;Q3SWV4;P18583-8 SON Protein SON yes no 0 0 1 8 0 1 48.281 48.348 3 0.030682 12833 20230619_1888_Aki_TMTPro18x_K_F8 57.792 41.16 93420 79205 70344 89163 92767 98383 103880 97251 115440 104180 111370 124750 120180 92063 103650 115000 145720 137500 86226 72595 73838 89349 94910 98792 104400 99644 116760 105540 114930 124560 121580 97327 108070 116410 138960 130390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92103000 9035 3474 8539 17182 13781 13781 1 9606 Homo sapiens 0.030771270525974614 FRFPSPILK Unmodified 1103.6492 0.64915064 563;3927 A0A024R9B5;B4DMM7;Q15291;Q15291-2 RBBP5 Retinoblastoma-binding protein 5 no no 0 0 1 7.5 0.5 1 1 56.687 56.745 3 0.0020444 16461 20230619_1888_Aki_TMTPro18x_K_F8 80.916 45.692 220470 201860 226740 235040 223460 244220 237980 240190 260100 188160 162880 120710 157400 111690 191900 185550 176260 107530 204060 185020 229800 234830 232720 246210 239810 244260 259710 191010 171270 125550 162350 119460 193610 180950 168320 103210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93323000 9036 563;3927 8540 17183;17184 13782 13782 1 9606 Homo sapiens 0.10147202990606274 FRGLEEGQAQAGQCPSLEGR Unmodified 2189.0284 0.028363376 4756 Q9Y6C2;A0A0A0MT20;Q9Y6C2-2 EMILIN1 EMILIN-1 yes no 0 0 1 5 0 1 44.863 44.941 3 4.2744E-30 11606 20230619_1885_Aki_TMTPro18x_K_F5 213.5 196.62 14729 15197 16638 13582 16438 14324 14916 19208 19628 25067 25428 32162 26963 21995 32889 22150 25710 30042 13656 13894 16714 13887 17022 14564 15297 19426 19989 25210 25944 31937 27732 23043 32884 22734 24698 28434 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40762000 9037 4756 8541 17185 13783 13783 1 9606 Homo sapiens -0.018589671552490472 FRGPFTDVVTTNLK Unmodified 1593.8515 0.85149185 3352 Q53XM7;O95292;E5RK64;O95292-2;Q59EZ6 VAPB Vesicle-associated membrane protein-associated protein B/C yes no 0 0 1 5 0 1 56.882 56.943 3 5.7519E-05 16651 20230619_1885_Aki_TMTPro18x_K_F5 103.14 72.573 62488 64918 69471 66353 61033 66003 72855 71257 82090 47779 46380 48225 46633 36307 62754 51945 48791 41647 57932 59411 69845 66948 64352 66924 73053 71825 81573 49603 49337 48557 48336 38668 62696 51412 46769 39692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94390000 9038 3352 8542 17186 13784 13784 1 9606 Homo sapiens 0.07832016814700182 FRGTEPEPR Unmodified 1087.5411 0.54105675 1209 A0A140VJX3;P25325;P25325-2;Q2VEU1;B1AH49;Q59HD5 MPST 3-mercaptopyruvate sulfurtransferase;Sulfurtransferase yes no 0 0 1 4.5 1.12 1 1 1 1 31.6 31.663 3 0.00098892 6230 20230619_1882_Aki_TMTPro18x_K_F3 91.658 63.26 169900 150170 170310 153620 228770 206660 191110 198650 218690 201820 244200 234630 231890 204910 213750 248530 284650 232010 157190 137500 173680 155690 231650 204960 195790 203500 222210 204820 248730 235830 236320 214560 221750 248040 271300 220730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 409140000 9039 1209 8543 17187;17188;17189;17190 13785;13786;13787 13785 3 9606 Homo sapiens 0.0007878666935994261 FRIDELEPR Unmodified 1173.6142 0.6142217 3900;2497 Q14697-2;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 1 5 0.816 1 1 1 50.326 50.388 3 0.00010253 13849 20230619_1885_Aki_TMTPro18x_K_F5 131.28 105.35 417040 344110 407500 383160 441500 532100 493440 476760 633630 426470 470260 425870 450170 375990 471320 453610 448020 474210 385570 315390 415210 385860 457860 525410 498650 489430 630290 434160 489060 430960 461080 393680 477530 455810 429070 450100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 829610000 9040 3900;2497 8544 17191;17192;17193 13788;13789 13789 2 9606 Homo sapiens 0.034359153920149765 FRIEDSFSVK Unmodified 1226.6295 0.62953741 2788 CON__P41361 yes yes 0 0 1 3.67 3.09 1 1 1 53.488 53.523 3 0.0047186 15807 20230619_1880_Aki_TMTPro18x_K_F1 73.346 19.087 + 99312 88002 100600 108600 115710 131340 117590 116400 157830 238040 337580 471510 241740 251490 365020 245170 299240 404940 91888 80716 102370 108270 119130 130770 119820 123300 165700 240840 334790 459840 255760 266150 364750 255800 287680 382540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73884000 9041 2788 8545 17194;17195;17196 13790;13791 13790 2 0.025287821891879503 FRLDIFK Unmodified 937.53854 0.53853756 4130 Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A8I5KSP1 LARP1 La-related protein 1 yes no 0 0 1 5 0 1 58.248 58.304 3 0.021715 17208 20230619_1885_Aki_TMTPro18x_K_F5 83.206 42.774 78400 81429 71125 72819 81731 110090 90829 82066 129500 5487.9 4308.5 9143.7 9915.5 7584.5 17904 7898.9 9701.5 6465.8 72560 74443 73061 74780 84544 107830 92109 83757 124320 10036 10611 9118.4 10377 7888.9 17555 7887.4 9339.2 6168.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70744000 9042 4130 8546 17197 13792 13792 1 9606 Homo sapiens 0.06726983002374709 FRLDNTLGGTSEVIHR Unmodified 1813.9435 0.94349476 1882 A0A994J7C7;Q96ST3;A0A994J7C5 SIN3A Paired amphipathic helix protein Sin3a yes no 0 0 1 1 0 1 47.677 47.677 4 3.0244E-05 13376 20230619_1880_Aki_TMTPro18x_K_F1 98.507 68.526 14473 10174 11361 13562 12441 17082 12843 13625 15219 15834 18080 15864 16041 12595 14946 13376 14280 19125 13347 9347.6 11833 13455 12886 16915 13005 14214 15483 15885 18309 15992 16372 13158 15174 13754 13703 18087 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50785000 9043 1882 8547 17198 13793 13793 1 9606 Homo sapiens 0.06908075161072702 FRLDYLPNPQFSTAK Unmodified 1795.9257 0.92571943 4738 Q9Y4D7-2;Q9Y4D7 PLXND1 Plexin-D1 yes no 0 0 1 5 0 1 59.389 59.443 3 0.00091691 17668 20230619_1885_Aki_TMTPro18x_K_F5 81.632 70.158 27907 24351 29043 28235 27409 27016 25168 26783 26291 25757 24517 23761 25955 20128 25217 28792 25758 24084 25824 22322 29368 28192 28510 27422 25565 27353 26666 26021 25301 24102 26397 21344 25705 28521 24628 22931 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13068000 9044 4738 8548 17199 13794 13794 1 9606 Homo sapiens 0.05959359906228201 FRPAGAAPRPPPK Unmodified 1360.7728 0.77278802 643 A0A024RB14;P62854;Q5JNZ5 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 0 0 2 7.5 0.5 1 1 36.838 36.864 4 0.00020062 8180 20230619_1888_Aki_TMTPro18x_K_F8 98.407 77.619 152460 94304 117730 134990 117250 159920 129670 144730 222870 150160 148570 206050 294440 246590 112700 442130 378960 505920 140500 86766 122600 133240 122690 159340 132870 149040 218730 153450 162440 208530 287630 263500 134360 443500 360890 479390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159130000 9045 643 8549 17200;17201 13795;13796 13796 2 9606 Homo sapiens 0.10683254090918126 FRPDMEEEEAK Oxidation (M) 1395.5976 0.59764493 2906 Q86U62;Q6IBT1;E9KL30;Q99436 PSMB7 Proteasome subunit beta type;Proteasome subunit beta type-7 yes no 0 1 1 1.5 0.5 1 1 39.654 39.689 3 0.013434 9617 20230619_1881_Aki_TMTPro18x_K_F2 69.261 52.239 92372 67978 92252 100800 106470 133880 112840 96624 369440 106280 100420 111360 119070 107590 98390 145400 131550 107710 85359 62520 94019 99450 110330 131930 120950 101590 350200 107770 116440 112740 120190 113000 102490 143260 125380 102790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 352590000 9046 2906 8550 17202;17203 13797 13797 1723 1 9606 Homo sapiens -0.08432998346916065 FRPEETK Unmodified 905.46068 0.46068117 1593 A0A669KAX9;Q5T653;C9IY40;B4DVE2 MRPL2 39S ribosomal protein L2, mitochondrial yes no 0 0 1 5 0 1 36.612 36.704 3 0.0060503 8174 20230619_1885_Aki_TMTPro18x_K_F5 105.14 44.454 127210 86843 127370 144560 188720 194520 191090 201350 200330 149880 193310 172240 171100 150660 164770 103030 202530 171430 117510 80015 130430 141810 191090 192970 192780 203770 203050 154960 197560 173090 175080 153690 169370 108360 193200 162210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77148000 9047 1593 8551 17204 13798 13798 1 9606 Homo sapiens 0.004169253463373934 FRPLNESEVNR Unmodified 1359.6895 0.6895119 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;Q6P164;Q66K46;Q2TA90;B4DS27 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 1 6.5 0.5 1 1 39.097 39.17 3 4.4453E-05 9173 20230619_1886_Aki_TMTPro18x_K_F6 136.53 101.17 147880 107680 139290 177110 128710 162390 164490 155130 197470 184420 195180 189080 202410 174350 173380 210200 211710 204630 136580 99166 142310 172810 135700 165020 164780 159860 199160 185010 200610 191300 205020 182210 179130 210240 202140 194440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 227720000 9048 2727 8552 17205;17206 13799;13800;13801 13800 3 9606 Homo sapiens 0.024054728524106395 FRPLNESEVNRGDK Unmodified 1659.8329 0.83288168 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;Q6P164;Q66K46;Q2TA90;B4DS27 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 2 6.5 0.5 1 1 39.385 39.461 4 6.7506E-05 8998 20230619_1887_Aki_TMTPro18x_K_F7 104.94 79.761 71515 59865 64575 66617 60629 58196 63049 66132 74523 79693 76405 71199 91619 67876 72477 87239 83283 72359 66084 54866 66107 66651 63317 59722 63823 67374 75408 79541 78917 72583 92049 71182 74708 86487 79504 68925 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 573720000 9049 2727 8553 17207;17208 13802 13802 1 9606 Homo sapiens 0.029358551728364546 FRPPETTER Unmodified 1131.5673 0.5672715 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 1 5 0.816 1 1 1 34.758 34.821 3 0.0010317 7409 20230619_1885_Aki_TMTPro18x_K_F5 109.44 87.395 227660 187510 202140 206120 247780 251160 232940 216200 269570 262270 300230 312920 285530 248080 260870 289110 402690 292860 210330 171850 208130 207280 253290 249900 236860 224570 273770 264160 306010 313120 290910 260140 273630 290030 383160 278520 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 218410000 9050 4386 8554 17209;17210;17211 13803;13804;13805;13806 13805 4 9606 Homo sapiens 0.006750558408384677 FRPSLEER Unmodified 1032.5352 0.53524309 1411;3506 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;H0YBB8;P26232-2;P26232-5;P26232;P26232-3 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 1 6.5 0.5 1 1 37.468 37.539 3 0.008227 8535 20230619_1886_Aki_TMTPro18x_K_F6 88.177 54.004 374090 291850 319510 331510 386620 405600 403940 406310 460890 365540 353350 311310 355070 281560 300850 431970 396250 301300 345400 267600 330190 332630 396750 404640 407930 413820 461840 370120 367340 317900 359790 299300 312840 423980 377550 287910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334410000 9051 1411;3506 8555 17212;17213 13807 13807 1 9606 Homo sapiens 0.02027688157704688 FRQDLMNIAGTTLSSK Oxidation (M) 1796.9091 0.90908309 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 1 1 3 0 1 55.483 55.524 3 0.00013098 16569 20230619_1882_Aki_TMTPro18x_K_F3 94.61 78.04 105740 88412 97604 109450 102980 111770 112940 110660 117670 118500 118520 117670 133610 100470 120540 126280 123290 137550 97729 81112 99978 108830 106800 112840 113460 113360 119690 119300 122220 118920 135160 105660 122990 127090 118040 130480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 723220000 9052 3756 8556 17214 13808 13808 2425 1 9606 Homo sapiens 0.042504909579520245 FRQDLMNIAGTTLSSK Unmodified 1780.9142 0.91416847 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 1 5 0 1 60.141 60.193 3 0.037863 17975 20230619_1885_Aki_TMTPro18x_K_F5 55.322 32.314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9053 3756 8556 17215 13809 13809 1 9606 Homo sapiens 0.05494794820583593 FRREEDAEK Unmodified 1178.568 0.56799978 3777 Q01081;B5BU08;Q01081-2;Q7Z780;Q01081-4 U2AF1 Splicing factor U2AF 35 kDa subunit yes no 0 0 2 3 0.816 1 1 1 31.572 31.639 4 0.00040757 6208 20230619_1882_Aki_TMTPro18x_K_F3 122.26 78.745 352670 216660 371440 356630 554280 423170 438110 466630 453520 381190 479000 398220 431150 357760 416770 220870 524770 389540 325740 199690 378170 349470 556540 424120 449080 471240 461990 390350 487640 402060 440850 363480 428820 234310 500110 368690 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 486280000 9054 3777 8557 17216;17217;17218 13810;13811;13812;13813 13811 4 9606 Homo sapiens -0.014141495101057444 FSAEFVDFTSQCLK Unmodified 1677.7709 0.77085827 520 A0A024R8K3;B5BU16;A8K3Y2;P52564-2;P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 yes no 0 0 0 8 0 1 63.305 63.327 3 7.3281E-07 19239 20230619_1888_Aki_TMTPro18x_K_F8 130.77 121.45 36779 30100 34517 32832 35104 36339 36443 40521 41327 35962 50796 54834 46734 51800 57791 53222 61674 69843 33991 27584 35245 33005 36443 36591 36846 40980 42160 37168 51547 54728 48437 53565 58762 54404 59029 66131 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 256160000 9055 520 8558 17219 13814 13814 1 9606 Homo sapiens -0.040916322904877234 FSAFLEK Unmodified 840.43815 0.43815481 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 2 0 1 59.654 59.666 3 0.0085472 18478 20230619_1881_Aki_TMTPro18x_K_F2 91.626 32.709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9056 3432 8559 17220 13815 13815 1 9606 Homo sapiens 0.011553259487186551 FSALQQAVPTESTDNRR Unmodified 1918.9497 0.94970235 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C044;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 1 7.5 0.5 1 1 47.089 47.157 3 3.4323E-30 12315 20230619_1888_Aki_TMTPro18x_K_F8 232.62 213.65 331670 225780 328880 305070 292460 330350 353520 343790 290740 365930 399020 375720 462210 368820 350430 412870 456590 422670 306340 207510 333650 301980 308130 332370 351180 350880 304380 368750 406860 380920 464270 383150 364480 414580 435600 401480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 909260000 9057 1676;2901 8560 17221;17222 13816;13817 13817 2 9606 Homo sapiens 0.026985486019384552 FSAPVVPSSFNFGGPAPGMN Oxidation (M) 1994.9196 0.91964777 3354 O95373;B3KQG6;B3KNG9 IPO7 Importin-7 yes no 0 1 0 2.5 0.5 1 1 64.501 64.521 3 4.585E-05 20337 20230619_1882_Aki_TMTPro18x_K_F3 84.249 83.559 85962 65697 65131 79409 71956 75528 89304 75124 75147 91918 89872 91543 103340 87374 86493 110360 89975 111460 79294 60280 68089 79010 74633 76686 88572 77283 78036 91955 92126 92832 104230 91494 88583 110510 86202 105770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 348700000 9058 3354 8561 17223;17224 13818 13818 1959 1 9606 Homo sapiens -0.038015263876104655 FSAPVVPSSFNFGGPAPGMN Unmodified 1978.9247 0.92473315 3354 O95373;B3KQG6;B3KNG9 IPO7 Importin-7 yes no 0 0 0 3.5 0.5 1 1 65.176 65.198 3 2.371E-22 20622 20230619_1882_Aki_TMTPro18x_K_F3 175.51 167.53 50755 41693 49839 48860 32387 51268 47079 49672 51276 62871 55970 61203 65374 56357 62091 70425 60579 67086 46926 38232 50452 48804 35541 51592 46787 51200 52251 62760 57663 62028 66265 59033 63162 70336 58021 63730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 221330000 9059 3354 8561 17225;17226 13819;13820 13819 2 9606 Homo sapiens -0.02557222524978897 FSASGELGNGNIK Unmodified 1292.6361 0.63607935 3437 Q6FHF5;P12004;Q6FI35 PCNA Proliferating cell nuclear antigen yes no 0 0 0 7 0 1 50.228 50.309 3 1.665E-15 13705 20230619_1887_Aki_TMTPro18x_K_F7 197.07 171.64 296590 217140 274210 270790 274380 378100 282470 319410 394650 386350 343380 331730 401660 344050 329040 438250 428900 353130 273890 199330 280470 270460 286080 372630 287920 331890 393870 385370 357100 339800 404800 359380 341940 433830 408880 336580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 563020000 9060 3437 8562 17227 13821 13821 1 9606 Homo sapiens 0.0014667534990167042 FSATEVTNK Unmodified 995.49238 0.49237523 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24;E2PSM9 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 6.5 0.5 1 1 46.338 46.424 2 8.0158E-12 11914 20230619_1887_Aki_TMTPro18x_K_F7 266.55 188.81 388740 312350 332680 367160 439610 506510 454100 438360 596730 449330 535000 504870 533510 442660 442090 552440 574820 520980 358990 286460 344500 368090 449090 499990 461190 452770 596800 455610 551390 508250 540290 464430 459070 551320 548330 495360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 311850000 9061 2414 8563 17228;17229 13822;13823 13823 2 9606 Homo sapiens -0.0055512669038080276 FSAVALCK Unmodified 894.46332 0.4633237 3423 V9HW74;P09936;D6RE83;B2RD14;A6NLJ7 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 0 0 3.5 1.12 2 2 2 2 53.247 53.291 2;3 0.0019585 15861 20230619_1881_Aki_TMTPro18x_K_F2 93.561 52.574 1841100 1582700 1593400 1758100 1848300 2110100 1753800 1736400 2152900 1321000 1245200 1149200 1207300 1017200 1680200 1344200 1402800 1119200 1701000 1450400 1644000 1765700 1899000 2098700 1785600 1788900 2132400 1354100 1319100 1170900 1256100 1070700 1683000 1334200 1342900 1066500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4967800000 9062 3423 8564 17230;17231;17232;17233;17234;17235;17236;17237 13824;13825;13826 13824 3 9606 Homo sapiens 0.01187057479626219 FSAVLVEPPPMSLPGAGLSSQELSGGPGDGP Oxidation (M) 2965.4379 0.4379034 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 1 0 5.33 0.471 2 1 65.213 65.257 3;4 0.0037682 20285 20230619_1885_Aki_TMTPro18x_K_F5 52.971 45.167 10086 6617.4 7804.8 9732.6 7977.5 8865.4 9466 12527 12228 12292 12016 12049 11393 10423 10575 14325 11356 11353 9296.8 6088.6 8132.5 9560.5 8323.3 9109.8 9550.2 12528 12294 12421 12310 12193 11614 11003 10833 14156 10858 10815 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64507000 9063 2263 8565 17238;17239;17240 13827;13828 13827 1405 2 9606 Homo sapiens 0.03380196373655053 FSAVLVEPPPMSLPGAGLSSQELSGGPGDGP Unmodified 2949.443 0.44298878 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 6.2 0.748 1 2 2 66.639 66.674 3;4 0.00056429 20755 20230619_1887_Aki_TMTPro18x_K_F7 70.451 63.091 33941 27940 31694 30858 36683 45510 34205 35326 48803 37944 42594 40878 39137 40746 44469 40034 39673 53123 31368 25606 32457 31121 37716 44667 35083 36849 48607 38339 43840 41367 40353 41986 44842 40989 38099 50269 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 175920000 9064 2263 8565 17241;17242;17243;17244;17245 13829;13830;13831 13831 3 9606 Homo sapiens 0.04624500236286622 FSCPETDSHR Unmodified 1234.5037 0.50368497 337 A0A024R5F4;P50416;B2RAQ8 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 0 3 0.816 1 1 1 32.985 33.047 3 0.00013599 6789 20230619_1882_Aki_TMTPro18x_K_F3 123.42 113.73 120490 80861 135580 146850 224630 226050 179600 207260 205480 137280 159340 166000 140140 126710 169090 110510 179230 135730 111400 74600 137870 143780 224880 222030 184490 211010 205860 143440 164940 165830 145090 131120 171640 112950 171090 128810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 119540000 9065 337 8566 17246;17247;17248 13832;13833 13833 2 9606 Homo sapiens -0.10418672658579453 FSDDHYR Unmodified 938.38824 0.38824451 87 Q2TB59;A0A024R0C3;Q13423;A0A590UJM2;A0A590UK29;A0A590UK15;D6RAI5;D6RHU2;A0A590UJA4;A0A590UKC7 NNT NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 6 0 1 33.298 33.339 3 0.0050549 7021 20230619_1886_Aki_TMTPro18x_K_F6 108 80.472 19772 14986 21092 22116 23988 24306 27552 25496 31109 23845 28803 26865 31076 25625 23390 24730 28522 19594 18284 13780 21368 21773 24762 24436 27673 25927 31369 24294 29738 27102 31276 26418 24206 24585 27179 18697 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5891300 9066 87 8567 17249 13834 13834 1 9606 Homo sapiens -0.0834140872724447 FSDFLGLHSK Unmodified 1149.5819 0.58185893 2353 Q53GG3;B3KN57;B3KML1;O60749;O60749-2;D6RC15 SNX2 Sorting nexin-2 yes no 0 0 0 2 0 1 57.023 57.039 3 0.0030228 17413 20230619_1881_Aki_TMTPro18x_K_F2 86.463 62.858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9067 2353 8568 17250 13835 13835 1 9606 Homo sapiens 0.013051279889850775 FSDFLGLYEK Unmodified 1217.5968 0.5968403 3862 Q59GU6;Q53HL9;Q53GY8;Q13596;Q13596-2;Q13596-3 SNX1 Sorting nexin-1 yes no 0 0 0 8 0 1 63.794 63.817 2 0.0032377 19443 20230619_1888_Aki_TMTPro18x_K_F8 98.04 58.892 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9068 3862 8569 17251 13836 13836 1 9606 Homo sapiens -0.0032542493368055148 FSDFPLSK Unmodified 939.47018 0.47018322 1766 B4DKX3;A0A8I5KSH6;Q13206;A0A8I5KQZ1;A0A3B3ISR7;Q86VR6;E9PIF2;Q59EC7;A0A8I5KXY1;A0A8I5KPM1;A0A8I5KUU7 DDX10 Probable ATP-dependent RNA helicase DDX10 yes no 0 0 0 8 0 1 58.456 58.503 2 0.0099413 17183 20230619_1888_Aki_TMTPro18x_K_F8 110.41 36.792 62146 42815 60914 66268 59850 69705 63941 58839 79466 68515 70049 67729 82327 60825 64618 76786 68611 78701 57399 39409 61999 64999 62415 69943 64709 61151 79689 68743 72816 68579 82729 63867 66310 76976 65678 74694 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11014000 9069 1766 8570 17252 13837 13837 1 9606 Homo sapiens -0.001973063681475651 FSDIQIR Unmodified 877.46577 0.46576654 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 6.5 0.5 1 1 49.181 49.262 2 0.0034523 13222 20230619_1887_Aki_TMTPro18x_K_F7 154.92 54.248 230510 174360 214140 210140 213340 238000 195550 223200 248430 268610 261730 268140 317250 252230 257230 308880 308740 303760 212920 159980 218810 209700 221350 238240 200020 230160 250880 269000 270330 271730 319090 263790 265740 309050 294870 288590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1352600000 9070 2973 8571 17253;17254 13838 13838 1 9606 Homo sapiens 0.022132292089395378 FSDLFSLAEEYEDSSTKPPK Unmodified 2289.0689 0.068874011 4094 Q68E01-2;Q68E01;Q68E01-3;Q68E01-4 INTS3 Integrator complex subunit 3 yes no 0 0 1 5 0 1 64.036 64.082 4 0.029517 19776 20230619_1885_Aki_TMTPro18x_K_F5 53.453 39.998 12488 9707.5 11971 11966 10571 11925 11864 13180 12803 14927 15903 15577 15347 12095 16802 17101 17339 16560 11539 8908.1 12181 11903 11129 12091 11928 13421 13122 15002 16149 15671 15743 12859 17091 17073 16579 15737 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30262000 9071 4094 8572 17255 13839 13839 1 9606 Homo sapiens -0.02409767074504998 FSDQFPLPLK Unmodified 1190.6336 0.63356015 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;Q92973-3;S4R398 TNPO1 Transportin-1 yes no 0 0 0 1.5 0.5 1 1 62.588 62.592 3 0.00051314 19777 20230619_1881_Aki_TMTPro18x_K_F2 101.38 80.428 295580 230680 254230 260790 230580 280250 235610 243630 255940 297110 304330 283410 299870 273850 311850 333090 314900 334280 272920 211500 261360 261220 241850 281100 238100 252860 261730 296960 309700 288140 306870 285880 317200 333790 301400 317420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 282920000 9072 629 8573 17256;17257 13840;13841 13841 2 9606 Homo sapiens 0.0458687168288634 FSDSYASVIK Unmodified 1115.5499 0.5498901 3468 P17812;A0A3B3IRI2;B4E1E0;A0A8Q3WKZ7;B4DMB5;P17812-2;A0A8Q3WL40;A0A3B3IRQ8;A0A3B3ITF6;A0A3B3ITB8;A0A3B3ISY3 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 8 0 1 54.963 55.03 2 1.4128E-06 15708 20230619_1888_Aki_TMTPro18x_K_F8 199.46 156.59 327360 248540 285440 301430 247240 289400 281220 282840 302990 370090 356920 318470 376190 298260 356140 373450 367410 361440 302240 228060 292950 299950 260990 293430 282440 291760 309940 367670 364280 325070 382190 312460 363210 373370 351380 343440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204650000 9073 3468 8574 17258 13842 13842 1 9606 Homo sapiens -0.0032628448482228123 FSDVLHTIK Unmodified 1058.576 0.57604528 3477 P19174;P19174-2;Q4LE43 PLCG1;PLCG1 variant protein 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1;Phosphoinositide phospholipase C yes no 0 0 0 1.5 0.5 1 1 54.075 54.089 3 0.0050352 16056 20230619_1880_Aki_TMTPro18x_K_F1 77.677 40.202 44091 35163 50486 45104 40850 53309 45660 47953 59534 49214 53655 57689 55803 47022 53530 58053 62063 66549 40812 32277 50581 44852 43394 53135 46217 49389 59596 49949 55449 57819 56787 49451 54970 58619 59330 63103 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48516000 9074 3477 8575 17259;17260 13843;13844 13843 2 9606 Homo sapiens 0.04910029477309763 FSEAEQR Unmodified 865.393 0.39299553 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9;P33993-2 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 1.5 0.5 1 1 34.661 34.69 2 0.0079071 7840 20230619_1880_Aki_TMTPro18x_K_F1 121.52 74.715 104890 50605 125990 127530 165040 162670 129270 159950 131290 99625 172900 180170 133950 150280 155040 52463 202240 150770 96899 47036 126790 122790 167150 161630 132630 161920 135090 106370 173820 178070 139210 150760 159280 60180 192690 142350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 182650000 9075 1091 8576 17261;17262 13845;13846 13845 2 9606 Homo sapiens -0.04508524584468887 FSEDDPEYMR Unmodified 1287.5078 0.50776729 3551 Q05DK5;P35612-4;P35612-3;P35612;P35612-2;P35612-8;P35612-9;A0A1C7CYY0;C9JTM0;P35612-5;P35612-6;C9J080;C9J299;P35612-7 ADD2 Beta-adducin yes no 0 0 0 1 0 1 47.301 47.301 2 7.4414E-08 13240 20230619_1880_Aki_TMTPro18x_K_F1 156.46 150.35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9076 3551 8577 17263 13847 13847 1 9606 Homo sapiens -0.12448627955518532 FSEGTSADREIQR Unmodified 1494.7063 0.70628418 896 V9HW24;A0A087X2I1;P62333;H0YJX2 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 1 2.5 0.5 1 1 36.542 36.598 3 2.9915E-16 8216 20230619_1882_Aki_TMTPro18x_K_F3 215.77 188.12 126240 121190 118760 113080 150830 149730 150570 155500 168710 130720 156650 143690 171190 114490 151150 168600 159810 137380 116800 110860 121700 115480 154010 148870 152380 157730 170250 133870 161830 144460 173090 122000 154620 166770 152660 130900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276550000 9077 896 8578 17264;17265 13848 13848 1 9606 Homo sapiens -0.021280710522887603 FSEIPQR Unmodified 875.45012 0.45011648 119 Q96GM5;A0A024R102;A0A024R137;Q96GM5-2;F8VRQ4;A8K9I5;F8VUB0;Q6STE5-2;B3KXL9;A0A090N8Z9;Q6STE5 SMARCD1;SMARCD3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 yes no 0 0 0 6 0 1 42.728 42.821 2 0.086558 10716 20230619_1886_Aki_TMTPro18x_K_F6 71.852 42.279 85532 63630 76145 84512 89915 99768 97282 86680 106200 101140 115940 107180 102680 86880 100480 110560 112400 106140 78972 58446 78398 83803 92528 99417 97910 89874 108040 101650 117860 107890 105110 91531 102930 110460 107390 100890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84169000 9078 119 8579 17266 13849 13849 1 9606 Homo sapiens 0.007409426919025464 FSELTAEK Unmodified 923.46001 0.46001246 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 5 0.816 2 2 2 50.759 50.82 2;3 0.00011136 14073 20230619_1885_Aki_TMTPro18x_K_F5 178.83 117.87 811690 651560 664170 704860 857700 828530 764780 782510 971200 897310 955730 910050 1006900 852020 858350 1069000 1054400 898940 749330 597090 689900 709340 872900 827970 782920 805500 977200 901380 983060 921830 1019100 892000 887370 1060800 1005900 856190 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2741300000 9079 2633 8580 17267;17268;17269;17270;17271;17272 13850;13851;13852 13852 3 9606 Homo sapiens -0.0047791409338060475 FSEVLKR Unmodified 877.50215 0.50215205 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;H0YJG0;H0YJK0 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 1 2 0.816 1 1 1 44.836 44.878 2;3 0.001682 12050 20230619_1881_Aki_TMTPro18x_K_F2 143.23 69.037 1602000 1418700 1518300 1695900 1517900 1305000 1533400 1543500 1500500 1955500 2191600 1725800 1858400 1480500 2104300 1441800 1548900 1098200 1481400 1300800 1549700 1685300 1574000 1356300 1545500 1571900 1559400 1945800 2199000 1754300 1916900 1533300 2101000 1433100 1484200 1048400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2151200000 9080 3441 8581 17273;17274;17275 13853;13854 13853 2 9606 Homo sapiens 0.05850106105674513 FSFCCSPEPEAEAEAAAGPGPCER Unmodified 2625.057 0.057022246 2889 E7EMC7;Q13501;E3W990;B4DE82;E3WH17;D6RBF1;C9J6J8 SQSTM1;SQSTM1-ALK Sequestosome-1;Tyrosine-protein kinase receptor yes no 0 0 0 2 0 1 56.325 56.343 3 1.1008E-34 17124 20230619_1881_Aki_TMTPro18x_K_F2 208.72 208.7 10308 8219.3 9428.7 11861 8666.7 11262 7868.5 11907 13255 10481 11122 11499 14595 10865 11078 14128 11987 14843 9523.2 7554.6 9653.4 11665 9069 11440 8159.4 12073 13110 10704 11661 11615 14609 11409 11394 14175 11480 14080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14624000 9081 2889 8582 17276 13855 13855 1 9606 Homo sapiens -0.19050398423269144 FSFDLGK Unmodified 812.40685 0.40685468 3789 Q02790;B2R9U2;F5H1U3 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 2 0 1 59.702 59.715 2 0.05442 18499 20230619_1881_Aki_TMTPro18x_K_F2 90.862 28.02 209920 172600 181920 219460 162990 191750 182860 191290 265940 266070 256070 314820 372640 288750 189030 415060 386140 423750 193900 158400 187060 217370 171660 195990 185850 197530 266020 266430 268420 316560 367930 305510 207580 414790 367810 402250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124680000 9082 3789 8583 17277 13856 13856 1 9606 Homo sapiens -0.006852470853800696 FSFSPEPTLEDIRR Unmodified 1692.8471 0.84713476 4523 Q9H773 DCTPP1 dCTP pyrophosphatase 1 yes yes 0 0 1 6 0 1 55.862 55.937 3 7.9751E-29 16439 20230619_1886_Aki_TMTPro18x_K_F6 252.14 210.8 194440 163500 158780 179950 149070 155650 167160 152830 183160 227020 179190 183690 207280 188950 187700 246410 208940 193240 179550 149830 164210 180120 156120 159300 168010 158390 185870 224110 185320 188600 209850 197670 192710 243570 199590 184160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 260410000 9083 4523 8584 17278 13857 13857 1 9606 Homo sapiens 0.028425076011217243 FSFTLPYPVK Unmodified 1197.6434 0.64339656 3075 H3BS72;Q9P035;H3BPZ1;Q9P035-2;H3BRL8 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 0 0 0 5.67 0.471 1 2 63.241 63.289 2;3 0.00047064 19620 20230619_1886_Aki_TMTPro18x_K_F6 103.7 70.58 150210 129960 133770 155860 131140 157330 170380 163530 179290 118350 121670 114980 129730 109100 143160 136410 125830 124480 138820 119180 137390 155300 137590 159090 169730 165480 179640 122030 127930 116800 132790 114170 144350 136000 120550 118370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 232750000 9084 3075 8585 17279;17280;17281 13858;13859 13858 2 9606 Homo sapiens 0.05248059688256035 FSGAVLNVPDTSDNSK Unmodified 1649.7897 0.78967946 405 H0YLY0;A0A024R6N2;Q9Y5S2 CDC42BPB Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK beta yes no 0 0 0 7 0 1 55.678 55.739 3 0.060435 16031 20230619_1887_Aki_TMTPro18x_K_F7 41.386 29.965 23211 22365 24212 26155 24163 30230 25171 29269 34609 24548 25737 26910 31111 27899 29692 27582 30969 32786 21494 20497 24526 26159 25171 30229 25621 29830 34344 25158 27070 27249 31529 28732 30275 28023 29632 31078 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7026600 9085 405 8586 17282 13860 13860 1 9606 Homo sapiens -0.00922379395092321 FSGDLDDQTCR Unmodified 1312.5354 0.53537903 2662 B5BUB5;P05455;Q14730 SSB Lupus La protein yes no 0 0 0 1.5 0.5 1 1 43.756 43.798 2 1.5546E-30 11570 20230619_1881_Aki_TMTPro18x_K_F2 280.11 272.73 280130 173610 256410 287820 321040 390330 378990 344290 421940 367060 400070 440450 464270 397100 319800 420390 523810 522130 258460 160030 263740 282390 330230 385570 379860 355550 426410 372160 414420 442230 465170 412400 339530 427460 499190 494850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 295700000 9086 2662 8587 17283;17284 13861;13862 13862 2 9606 Homo sapiens -0.10838724695281599 FSGEELDK Unmodified 923.42363 0.42362696 2239 B2R6S9;P30533;A8K8F6;A0A3B3IRQ7 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes no 0 0 0 3 0 1 47.86 47.939 2 0.0067255 13218 20230619_1882_Aki_TMTPro18x_K_F3 109.71 55.306 92825 80641 84932 95252 105120 111860 104760 110720 137840 112660 132460 142840 136250 115940 115110 151020 255030 161840 85806 73938 87298 95219 107620 111840 106670 113230 138250 114710 136360 142770 138130 122330 125290 151680 242010 153940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80187000 9087 2239 8588 17285 13863 13863 1 9606 Homo sapiens -0.041147909900928425 FSGGFGAR Unmodified 797.38204 0.38203692 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A024R9A4;Q5S4N1;B4E132;A0A0J9YVQ7;A0A087WVZ1 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 2 0.816 1 1 1 43.26 43.31 2 0.0025459 11044 20230619_1882_Aki_TMTPro18x_K_F3 125.01 94.587 745410 601590 661850 696590 804740 893410 801330 786390 996840 564190 553490 508920 532980 429480 601100 624130 687890 445680 688560 551630 681660 698320 825030 886030 813790 804770 985540 581320 587760 517040 548090 455780 614860 614090 655650 426090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 472760000 9088 1018 8589 17286;17287;17288 13864;13865 13865 2 9606 Homo sapiens -0.024758821680961773 FSGGYPALMDCMNK Oxidation (M) 1605.6626 0.66257015 2044 A8K4I8;Q9BPW8;H7C2U6 NIPSNAP1 Protein NipSnap homolog 1 yes no 0 1 0 4.5 3.5 1 1 56.29 56.347 3 1.3717E-05 16314 20230619_1888_Aki_TMTPro18x_K_F8 113.99 104.46 34559 34875 35498 34429 37527 37240 35613 42838 45108 36296 40722 39159 39998 34673 42294 42208 44802 48032 32010 31910 35997 34880 38747 37601 36339 43177 45216 37124 41953 39497 40964 36320 43106 42618 42864 45547 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46228000 9089 2044 8590 17289;17290 13866;13867 13867 1284;1285 2 9606 Homo sapiens -0.11603463136952996 FSGGYPALMDCMNK Unmodified 1589.6677 0.66765553 2044 A8K4I8;Q9BPW8;H7C2U6 NIPSNAP1 Protein NipSnap homolog 1 yes no 0 0 0 2 0 1 60.921 60.932 3 9.3823E-07 18993 20230619_1881_Aki_TMTPro18x_K_F2 126.51 112.64 185750 167350 188630 186150 146510 184060 187890 187480 200140 225860 218950 240740 237380 207510 242860 263360 252660 286490 171890 153340 190750 186520 156780 186370 187530 192350 204090 226590 224790 242560 241990 218110 247520 264980 241880 271740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 246870000 9090 2044 8590 17291 13868;13869 13869 2 9606 Homo sapiens -0.10359159274321428 FSGQIER Unmodified 835.41882 0.41881635 674 B4DNL1;Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DJV5 PWP1 Periodic tryptophan protein 1 homolog yes no 0 0 0 5 0 1 39.044 39.135 2 0.021631 9168 20230619_1885_Aki_TMTPro18x_K_F5 92.491 21.822 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9091 674 8591 17292 13870 13870 1 9606 Homo sapiens -0.005476303421914963 FSGVNEQPPVVLAVK Unmodified 1582.8719 0.87189295 4290 Q8WYP5;Q8WYP5-3;Q8WYP5-2;Q96M44 AHCTF1 Protein ELYS yes no 0 0 0 1 0 1 60.375 60.375 3 0.048481 18681 20230619_1880_Aki_TMTPro18x_K_F1 44.252 18.122 25117 21246 27705 30715 22696 24342 25528 29215 31155 36194 35159 28565 31943 32503 29869 35432 29887 29955 23250 19524 27867 30152 24042 25207 25776 29690 31603 35966 35696 29499 32635 33529 30443 35243 28596 28509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86768000 9092 4290 8592 17293 13871 13871 1 9606 Homo sapiens 0.10377187474500715 FSGWYDADLSPAGHEEAK Unmodified 1978.8697 0.86972069 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6 PGAM1 Phosphoglycerate mutase;Phosphoglycerate mutase 1 yes no 0 0 0 5 0.816 1 1 1 55.772 55.821 3 3.6422E-24 16382 20230619_1886_Aki_TMTPro18x_K_F6 210.75 189.81 188350 178200 205900 208700 196760 266700 207670 201920 214820 241630 202520 265670 239200 200990 190580 244040 265600 329780 174470 163320 207630 209000 205720 263700 209050 211840 218250 242760 210380 266110 240730 211890 199100 249130 253840 312080 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 538230000 9093 3475 8593 17294;17295;17296 13872;13873;13874 13874 3 9606 Homo sapiens -0.08055937791891665 FSGWYDADLSPAGHEEAKR Unmodified 2134.9708 0.97083172 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6 PGAM1 Phosphoglycerate mutase;Phosphoglycerate mutase 1 yes no 0 0 1 5 0.816 1 1 1 51.078 51.139 4 0.041616 14423 20230619_1886_Aki_TMTPro18x_K_F6 45.88 36.349 78897 75721 94693 103560 90154 75483 93599 84266 92958 107550 100570 95588 110270 74500 102520 107510 108370 98684 73153 69509 94828 101920 93835 78732 94188 86180 95152 107020 103230 96871 111730 79380 104730 107000 103560 93859 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192280000 9094 3475 8594 17297;17298;17299 13875 13875 1 9606 Homo sapiens -0.05125486089173137 FSGYGQLCER Unmodified 1215.5343 0.53425682 4533 Q9H871-2;Q9H871 RMND5A Protein RMD5 homolog A yes no 0 0 0 7 0 1 46.751 46.839 2 0.0094293 12116 20230619_1887_Aki_TMTPro18x_K_F7 80.037 69.327 53945 44269 51180 56185 50755 62504 57858 58088 64435 68136 67763 73188 68648 60106 63959 79541 73912 71477 49861 40627 52254 55837 53004 62606 58141 59918 65432 68465 69447 73620 69833 63433 65756 79124 70605 67984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33571000 9095 4533 8595 17300 13876 13876 1 9606 Homo sapiens -0.06488894273525148 FSGYREDNIPQLEDVSR Unmodified 2023.9599 0.95993268 3395 P07101-3;P07101-4;P07101-2;P07101 TH Tyrosine 3-monooxygenase yes no 0 0 1 4.5 0.5 1 1 51.871 51.922 3 5.0833E-38 14551 20230619_1885_Aki_TMTPro18x_K_F5 245.74 222.06 171320 142330 155710 396300 125880 134510 163810 152260 185740 207180 211350 244640 229910 198160 221240 231920 233100 269860 158310 132220 160440 374980 134150 155930 163690 156440 189100 207510 216710 244930 233650 207750 225850 234600 223170 255780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 775970000 9096 3395 8596 17301;17302 13877;13878 13878 2 9606 Homo sapiens -0.011088884634773422 FSHEEIAMATVTALR Unmodified 1674.8399 0.83994089 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;A0A0M4FNU3;H3BU78;A4UCS9;H3BR68 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 5.75 2.77 1 2 1 55.208 55.251 3 2.7319E-52 15799 20230619_1888_Aki_TMTPro18x_K_F8 302.73 267.95 317620 125170 256790 311340 262890 285960 300140 307950 372040 379380 346710 382660 398310 344400 357950 442600 392940 459190 292280 116470 266330 298400 273810 291270 302690 315020 374150 379660 359420 386970 403050 361740 367120 443850 376080 435730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6951899999.999999 9097 3378 8597 17303;17304;17305;17306 13879;13880;13881;13882 13882 4 9606 Homo sapiens 0.029514517290635922 FSHEEIAMATVTALR Oxidation (M) 1690.8349 0.83485551 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;A0A0M4FNU3;H3BU78;A4UCS9;H3BR68 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 1 0 7.5 0.5 1 1 50.068 50.146 3 2.3532E-14 13553 20230619_1888_Aki_TMTPro18x_K_F8 184.02 165.41 210690 144110 184860 207980 198100 208290 214800 198850 254970 231860 251510 257310 248900 200300 213040 273150 278320 263750 194420 132540 190260 204710 205200 210360 216830 204780 257270 233370 258090 258160 252410 212360 221200 272610 265560 250670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 611890000 9098 3378 8597 17307;17308 13883;13884 13884 1983 2 9606 Homo sapiens 0.01707147866432024 FSHEEIAMATVTALRR Unmodified 1830.9411 0.94105192 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;A0A0M4FNU3;H3BU78;A4UCS9;H3BR68 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 1 2.5 0.5 1 1 51.149 51.206 4 1.0365000000000001E-33 14661 20230619_1882_Aki_TMTPro18x_K_F3 253.06 218.06 125190 79058 129690 112470 120270 103800 117770 132470 121580 120070 104530 94326 110140 88562 130770 127640 107730 108130 115630 72726 131060 110790 125350 106330 119120 132970 123050 121180 108300 96816 113170 93634 131330 126560 103300 102910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 529300000 9099 3378 8598 17309;17310 13885;13886 13886 2 9606 Homo sapiens 0.05881903431759383 FSHQASGFQCDLTTNNR Unmodified 1981.8701 0.87007182 4609 Q9NVV4 MTPAP Poly(A) RNA polymerase, mitochondrial no no 0 0 0 7.5 0.5 1 1 42.7 42.703 3 1.3176E-31 10544 20230619_1888_Aki_TMTPro18x_K_F8 242.48 242.46 10021 5680.8 8584.5 10232 11950 10704 10822 11799 13349 14989 9610.2 12283 14621 9864.2 11335 10329 14123 12092 9237.7 5244.8 8897.3 9957.8 12103 10813 11053 12057 13337 14889 10272 12484 14594 10298 11730 10475 13471 11474 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54301000 9100 4609 8599 17311;17312 13887;13888 13888 2 9606 Homo sapiens -0.08158841343697532 FSHSVQNSER Unmodified 1189.5476 0.54759869 605 A0A024RA36;Q8NBF6 KIAA0241;AVL9 Late secretory pathway protein AVL9 homolog yes no 0 0 0 4.5 0.5 1 1 28.908 28.982 3 1.1779E-05 5371 20230619_1885_Aki_TMTPro18x_K_F5 149.23 106.89 12141 8303.6 12202 13019 17603 13788 16586 17670 14729 9074.1 17503 14556 14577 9484.4 17638 7863.8 17308 13246 11216 7644.7 12472 12770 17775 13979 16728 17552 15188 9794.1 17689 14370 15092 9882.5 17806 8261.9 16535 12539 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11566000 9101 605 8600 17313;17314 13889 13889 1 9606 Homo sapiens -0.0395932016988354 FSIEDLK Unmodified 850.44363 0.44363412 253 A0A024R3M1;Q9P016;Q9P016-2 THYN1 Thymocyte nuclear protein 1 yes no 0 0 0 5.5 0.5 1 1 59.222 59.282 2 0.0056347 17818 20230619_1886_Aki_TMTPro18x_K_F6 139.31 25.29 190180 167220 184020 208620 226660 264660 247610 250140 269400 233900 253280 273020 274830 231330 283180 280800 276510 313370 175890 153390 188290 207990 232740 262970 249070 256070 272490 238490 261790 274000 280190 242660 287440 283210 264880 297160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278300000 9102 253 8601 17315;17316 13890 13890 1 9606 Homo sapiens 0.012430047405246114 FSIQTMCPIEGEGNIAR Oxidation (M) 1937.8975 0.89753212 71 A0A024QZY1;Q13155;B2R7M3;Q13155-2;A8MU58 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes no 0 1 0 5.5 0.5 1 1 53.357 53.432 3 1.9823E-13 15377 20230619_1886_Aki_TMTPro18x_K_F6 146.3 135.83 33538 29083 29463 32190 34119 37635 34633 34824 43844 41814 36500 45646 47768 35750 37672 47351 42881 47289 30992 26650 30355 32332 35110 37590 35169 35955 43881 42004 38343 45797 47889 37837 38827 47363 41009 44900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219920000 9103 71 8602 17317;17318 13891 13891 33 1 9606 Homo sapiens -0.0339007412767387 FSIQTMCPIEGEGNIAR Unmodified 1921.9026 0.9026175 71 A0A024QZY1;Q13155;B2R7M3;Q13155-2;A8MU58 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes no 0 0 0 6.5 0.5 1 1 59.049 59.107 3 2.1794E-13 17727 20230619_1886_Aki_TMTPro18x_K_F6 149.97 136.87 95599 78661 93630 98938 70409 91919 83307 81158 88405 108600 97977 94740 112580 88628 96269 115840 113100 116840 88386 72182 94962 98153 75434 93213 83474 84424 90281 107840 100690 96611 113620 93121 99217 115960 108080 110950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 495370000 9104 71 8602 17319;17320 13892;13893 13892 2 9606 Homo sapiens -0.02145770265065039 FSLENNFLLQHNIR Unmodified 1743.9057 0.90565269 1598 P42224;P42224-2;A0A669KB53;A0A669KBA4;A0A669KB56;A0A669KB68;A0A8V8TN81;A0A669KBI6;J3KPM9;A0A669KB52;A0A669KB75;E7EPD2;A0A669KB17;A0A8V8TLI6;D2KFR9;E7ENM1 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription yes no 0 0 0 3 0 1 58.411 58.442 3 2.8007E-17 17833 20230619_1882_Aki_TMTPro18x_K_F3 216.34 180.7 31853 30779 32414 37503 32451 34248 35461 33787 37774 36375 35531 36049 37272 33462 40912 38876 34878 34353 29491 28220 32910 37277 33767 34879 35655 34636 38270 36617 36657 36524 38163 34874 41194 38740 33426 32679 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24095000 9105 1598 8603 17321 13894 13894 1 9606 Homo sapiens 0.06345608966262262 FSLQDPPNK Unmodified 1044.524 0.52400971 3284 O60701;O60701-3;O60701-2 UGDH UDP-glucose 6-dehydrogenase yes no 0 0 0 7 0.816 1 1 1 49.979 50.058 3 0.00085371 13612 20230619_1887_Aki_TMTPro18x_K_F7 100.98 71.636 133500 102490 125620 138180 146260 150920 146010 117530 170220 154730 161220 137990 161090 120960 147080 174650 174430 162610 123340 94139 128640 136720 150240 150910 147910 123470 171670 153960 165670 140390 163670 128250 151470 173880 166550 154610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130070000 9106 3284 8604 17322;17323;17324 13895;13896 13895 2 9606 Homo sapiens 0.003528660635538472 FSMPGFK Unmodified 812.3891 0.38909613 3815 Q09666;Q8N274;Q6ZQN2;B4DTV0;Q13727 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 4 0.816 1 1 1 58.209 58.239 2 0.007007 17531 20230619_1883_Aki_TMTPro18x_K_F4 135.87 102.31 349040 239470 264070 208730 231190 328900 356590 372120 451670 449960 447320 587510 547530 498980 537980 620860 485400 721850 321770 219220 274660 215340 247040 324410 355160 378980 454640 454710 464610 586900 555340 523990 544870 627290 466570 683670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 403530000 9107 3815 8605 17325;17326;17327 13897;13898 13897 2 9606 Homo sapiens -0.024602856118804084 FSMVVQDGIVK Oxidation (M) 1237.6377 0.63765925 3528 V9HW35;P30044-2;P30044;P30044-3;P30044-4 HEL-S-55;PRDX5 Peroxiredoxin-5, mitochondrial yes no 0 1 0 8 0 1 55.49 55.552 3 0.027089 16027 20230619_1888_Aki_TMTPro18x_K_F8 50.275 32.949 48876 43363 50813 54967 46688 59129 56714 53445 56918 64137 57048 53577 67191 56867 69061 79994 59488 60163 45233 39784 51433 54604 49131 59327 56616 55286 58039 63927 58973 55032 68330 59755 69728 78877 57015 57351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50336000 9108 3528 8606 17328 13899 13899 2192 1 9606 Homo sapiens 0.028345931142666814 FSNISAAK Unmodified 836.43922 0.43921744 3622 P50991;A8K3C3;P50991-2 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 2 0 1 46.361 46.44 3 0.0051149 12784 20230619_1881_Aki_TMTPro18x_K_F2 90.709 68.938 195150 126320 189230 191020 230270 240310 210720 220010 276920 212150 246710 242170 254570 222280 224430 168650 268110 233860 180170 116280 193320 188170 235430 238740 215660 225910 276970 215900 254830 243680 258200 227180 230810 174220 255860 221550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 393380000 9109 3622 8607 17329 13900 13900 1 9606 Homo sapiens 0.014455403176043546 FSNLLGTVYR Unmodified 1168.6241 0.6240581 3924 Q15269;C9J544 PWP2 Periodic tryptophan protein 2 homolog yes no 0 0 0 5.5 0.5 1 1 60.744 60.798 2 0.012103 18243 20230619_1885_Aki_TMTPro18x_K_F5 73.841 54.228 67362 52593 57926 61788 65045 81764 68588 79198 91385 43238 38210 33477 39057 33140 58507 43878 37622 41531 62198 48238 59772 61915 67238 81067 69637 80072 89546 45417 41755 34475 40766 34773 57921 43836 36225 39457 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65624000 9110 3924 8608 17330;17331 13901 13901 1 9606 Homo sapiens 0.04649103397377985 FSNQETCVEIGESVR Unmodified 1753.7941 0.79411291 3683 Q53FW2;P60891;B1ALA9;A0A2R8Y7H4;A0A6Q8PHK9;B1ALA7 PRPS1 Ribose-phosphate pyrophosphokinase 1 yes no 0 0 0 3 0 1 49.774 49.849 2 0.0011794 14051 20230619_1882_Aki_TMTPro18x_K_F3 90.731 78.865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9111 3683 8609 17332 13902 13902 1 9606 Homo sapiens -0.052632382438559944 FSPAGPILSIR Unmodified 1156.6604 0.66044361 566 P11940;A0A024R9C1;A0A7I2V649;H0YAR2;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2YQ90;A0A024R9E2;Q3ZCS4;Q9H361;Q5VX58;Q2VIP3;H0YBN4;E5RJB9;Q4VXU2;A0A6Q8JFT6;E5RH24;Q4VXU2-2;E5RHG7;A0A6Q8JFV4;A0A7I2V3J9;E5RFD8;E5RGC4 PABPC1;PABPC3;PABPC1L Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like no no 0 0 0 4.5 0.5 1 1 58.667 58.696 2 4.2406E-05 17755 20230619_1883_Aki_TMTPro18x_K_F4 142.92 92.792 243230 228940 223590 226450 254020 319440 272560 267190 344700 97134 93623 88360 102480 82445 125390 106070 101130 93274 224970 209530 229310 230230 262410 314720 275750 272010 336260 107530 108310 90103 105480 86502 125650 105570 96945 88757 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 503520000 9112 566 8610 17333;17334 13903 13903 1 9606 Homo sapiens 0.08837980294106274 FSPAGPVLSIR Unmodified 1142.6448 0.64479354 1667 Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;B1ANR1 PABPC4 Polyadenylate-binding protein 4;Polyadenylate-binding protein yes no 0 0 0 4 0 1 55.879 55.888 2 2.7329E-06 16606 20230619_1883_Aki_TMTPro18x_K_F4 163.86 132.63 155180 147280 150100 174560 213090 289290 234550 243970 358640 53435 50847 46121 46158 37494 73216 49166 48446 47700 143600 135010 154120 175490 217590 282550 238720 247170 345010 64626 66453 47047 48676 39593 72475 49216 46587 45324 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 262530000 9113 1667 8611 17335 13904 13904 1 9606 Homo sapiens 0.07917693777039858 FSPDGELYASGSEDGTLR Unmodified 1899.8487 0.8486509 4727 Q9Y3F4;Q9Y3F4-2;B0AZV0;H0YH33 STRAP Serine-threonine kinase receptor-associated protein yes no 0 0 0 2.33 0.471 2 1 54.465 54.497 2;3 1.8882E-71 16352 20230619_1881_Aki_TMTPro18x_K_F2 331.14 313.33 147140 131350 155940 136950 139390 175290 161180 147670 173530 157130 141270 148790 166570 131210 146810 187130 161330 163230 136210 120280 157350 138450 146820 173710 161640 153030 174830 158100 147630 150870 168230 138910 150660 185690 154240 155280 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 635120000 9114 4727 8612 17336;17337;17338 13905;13906;13907 13905 3 9606 Homo sapiens -0.0652794789143627 FSPENTR Unmodified 849.39808 0.39808091 2788;555 A0A3Q8Q4D0;A0A3S8NFS6;A0A0K0Q2Z1;A0A024R944;A0A2S0BDD1;P01008;A0A2H4R0R4;CON__P41361 SERPINC1 Antithrombin-III no no 0 0 0 3.5 0.5 1 1 35.831 35.889 2 0.010071 7839 20230619_1883_Aki_TMTPro18x_K_F4 105.25 39.573 + 24521 14492 22071 25225 42439 51745 33800 33405 54931 50898 99310 166830 70240 83621 101060 36150 105700 125180 22616 13370 22960 24898 42326 49857 35240 35905 56414 53987 99027 160880 74213 86407 102110 42298 101220 117880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37512000 9115 555;2788 8613 17339;17340 13908;13909 13909 2 9606 Homo sapiens -0.03264220721860056 FSPENTRK Unmodified 977.49304 0.49304393 2788;555 A0A3Q8Q4D0;A0A3S8NFS6;A0A0K0Q2Z1;A0A024R944;A0A2S0BDD1;P01008;A0A2H4R0R4;CON__P41361 SERPINC1 Antithrombin-III no no 0 0 1 1 0 1 36.229 36.229 3 0.0077772 8479 20230619_1880_Aki_TMTPro18x_K_F1 85.67 46.048 + 16442 12388 17995 26949 51676 58020 31590 30672 63570 98203 246300 384520 107030 169570 278370 54040 227040 262120 15208 11456 18716 26349 50545 55666 34099 35171 69946 104110 239180 369160 122180 175570 275970 68569 217970 246630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94044000 9116 555;2788 8614 17341 13910 13910 1 9606 Homo sapiens 0.0033971274932582674 FSPEVPGQK Unmodified 987.50255 0.50254598 630 A0A024RAM4;P46821;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RGJ3 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 7 0.816 1 1 1 47.923 47.998 3 0.00011598 12623 20230619_1887_Aki_TMTPro18x_K_F7 136.8 109.7 209270 163610 177490 196270 202950 210280 198590 199780 234790 231380 269090 289370 275490 241600 254490 283900 307170 290400 193210 150090 183410 195720 208700 211400 201670 205710 238510 233920 274880 289500 280050 252950 262220 284910 293270 275820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 592100000 9117 630 8615 17342;17343;17344 13911 13911 1 9606 Homo sapiens 0.00829481034861601 FSPFPVQDRPESSLVFK Unmodified 1979.0153 0.015262719 1230 Q9UQ35;A0A140VK53;O60382;Q9UQ35-2 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 0 1 2.5 0.5 2 2 60.996 61.016 3;4 1.226E-09 19005 20230619_1881_Aki_TMTPro18x_K_F2 140.89 115.18 228150 188210 201180 235850 194040 255310 226540 234280 256140 256770 261500 257500 277970 222130 247780 296670 271050 293720 210770 172700 206770 234470 203410 256100 227510 241390 259530 258310 268730 260280 281650 234310 254060 296600 259270 278920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 720750000 9118 1230 8616 17345;17346;17347;17348 13912;13913;13914 13912 3 9606 Homo sapiens 0.06491569794911811 FSPGAPGGSGSQPNQK Unmodified 1514.7114 0.71136956 3947 Q15942;Q96AF9;Q28617;B4DY85;H0Y2Y8;Q9BUS0;Q15942-2;B4DQR8;H7C3D3 ZYX Zyxin yes no 0 0 0 8 0 1 41.999 41.996 3 2.1588E-08 10282 20230619_1888_Aki_TMTPro18x_K_F8 136.14 109.7 34879 24158 28548 35882 41848 47881 52961 57052 73516 48453 45813 46564 58158 39219 38216 55997 55433 43237 32172 22224 29792 35419 42772 47685 53336 57377 72557 49408 48824 47133 57978 41613 40254 55238 52787 41246 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40800000 9119 3947 8617 17349 13915 13915 1 9606 Homo sapiens -0.025397671896598695 FSPIPFPPLSYK Unmodified 1391.7489 0.74892426 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 6 0 1 64.08 64.126 3 0.00011941 19984 20230619_1886_Aki_TMTPro18x_K_F6 108.56 86.09 67596 61008 69906 78657 67769 83621 74185 80576 92907 73338 73650 63742 67535 64780 86760 74379 76795 64787 62562 55979 70851 78036 70824 84079 75024 82320 92761 74261 76179 65233 70086 67257 87263 74107 73490 61681 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60484000 9120 1863 8618 17350 13916 13916 1 9606 Homo sapiens 0.06871975813896825 FSPNGEWLASSSADK Unmodified 1594.7264 0.72635092 3700 P61964;V9GZ59 WDR5 WD repeat-containing protein 5 yes no 0 0 0 6 0 1 56.778 56.85 3 0.080434 16846 20230619_1886_Aki_TMTPro18x_K_F6 37.645 25.36 44099 29324 42904 41199 34771 39678 43300 42212 55416 47885 45719 49194 56490 54252 49521 52217 49972 60029 40721 26965 43550 40616 37021 40285 43543 43109 55375 48161 47860 50040 57025 55677 50521 52942 47878 56896 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36636000 9121 3700 8619 17351 13917 13917 1 9606 Homo sapiens -0.04722320112341549 FSPNSSNPIIVSCGWDK Unmodified 1906.8883 0.88834765 2907 P63244;E9KL35;J3KPE3;H0Y8W2;D6RAC2;H0YAF8;D6REE5;H0YAM7;D6RHH4;D6R9L0;D6R9Z1;D6RFX4;B4DVD2;D6RBD0;H0Y8R5 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 1.5 0.5 1 1 61.091 61.096 3 1.8629999999999998E-23 19027 20230619_1881_Aki_TMTPro18x_K_F2 197.49 188.89 307960 251610 303560 306460 282120 303570 322940 320010 324110 394040 317290 311610 419700 316060 290350 409920 382820 378750 284720 230810 308410 305040 295710 307640 323390 327730 330450 391630 330210 320260 418750 331090 303280 408310 365360 360090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3528899999.9999995 9122 2907 8620 17352;17353 13918;13919 13919 2 9606 Homo sapiens -0.028820994217085172 FSPTDFLAK Unmodified 1024.5229 0.52294707 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 1.5 0.5 1 1 61.964 61.968 2 0.00044319 19474 20230619_1881_Aki_TMTPro18x_K_F2 158.61 112.6 1013600 782490 854530 947390 737190 892120 919130 1046100 1097600 1204700 1212100 1333900 1369900 1309500 1188300 1491200 1335200 1498200 935690 717950 880150 942760 781150 909730 922330 1062100 1113200 1212700 1245900 1347500 1385500 1360500 1221400 1495200 1277200 1422300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1235900000 9123 1723 8621 17354;17355 13920 13920 1 9606 Homo sapiens 0.011666516946661432 FSPVTPK Unmodified 774.42759 0.42759012 3947 Q15942;Q96AF9;Q28617;B4DY85;H0Y2Y8;Q9BUS0;Q15942-2;B4DQR8;H7C3D3 ZYX Zyxin yes no 0 0 0 2 0 1 47.002 47.078 2 0.070299 13117 20230619_1881_Aki_TMTPro18x_K_F2 77.058 42.98 197920 145430 188840 204320 218420 241950 290970 289010 361710 255630 266130 252230 304030 228530 221700 284600 269730 262650 182820 133670 193210 202000 226570 242780 291150 291010 360300 260190 279010 255570 305050 239600 229880 283700 257570 249730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202970000 9124 3947 8622 17356 13921 13921 1 9606 Homo sapiens 0.03135343294297854 FSQEVQITEAR Unmodified 1306.6517 0.65172941 2856 D6W4Z6;P31350;P31350-2;A0A7P0SBL1;A0A286YFD6;B3KS26 hCG_23833;RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes no 0 0 0 3.5 0.5 1 1 47.566 47.626 2 0.0011159 13082 20230619_1882_Aki_TMTPro18x_K_F3 101.35 74.656 88853 62751 76663 87619 48727 79197 70477 67867 84829 104420 90752 71796 110140 81760 74075 114770 98918 75953 81996 57683 78557 86293 53663 80392 70286 71117 85956 102580 93505 74790 110010 85781 77546 112510 94244 72636 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177240000 9125 2856 8623 17357;17358 13922 13922 1 9606 Homo sapiens 0.01066961866922611 FSQIVNLK Unmodified 947.54402 0.54401687 395 A0A024R6H0;Q9P2I0;B3KN45 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes no 0 0 0 4 0 1 57.547 57.551 2 0.004638 17374 20230619_1883_Aki_TMTPro18x_K_F4 129.72 50.27 66299 49566 57722 64857 62142 79492 68919 64975 74662 77281 81334 74933 77782 66132 68927 88528 89495 91186 61206 45520 59475 64407 64487 78903 69274 67717 76017 77382 82929 75923 79097 69704 71491 88685 85441 86574 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101040000 9126 395 8624 17359 13923 13923 1 9606 Homo sapiens 0.06814661794180665 FSQLYPER Unmodified 1038.5134 0.51344502 1440 B2R694;A0A384MTQ5;P48449-3;P48449;A0A0G2JQD0;P48449-2 LSS Terpene cyclase/mutase family member;Lanosterol synthase yes no 0 0 0 7 0 1 48.756 48.843 2 0.055513 13102 20230619_1887_Aki_TMTPro18x_K_F7 70.256 49.284 144250 110890 138410 135260 131200 159820 156420 149260 186830 159980 174590 167240 177500 152950 166990 191830 193070 178320 133290 101750 140980 134950 137690 159470 157190 153510 188020 161400 179790 169060 180610 160270 171560 191330 184380 169560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84236000 9127 1440 8625 17360 13924 13924 1 9606 Homo sapiens -0.0042711659086762666 FSSNQPPAAGSSR Unmodified 1304.6109 0.61092723 1616 Q27J81;Q27J81-2;A0A6Q8PHA2;A0A6Q8PH71;A0A6Q8PHG2;A0A6Q8PGN3;A0A6Q8PF44;A0A6Q8PFW4;A0A0A0MQU1;A0A6Q8PHS8 INF2 Inverted formin-2 yes no 0 0 0 7.5 0.5 1 1 35.478 35.466 2 0.0047241 7642 20230619_1888_Aki_TMTPro18x_K_F8 99.283 67.993 13224 9613.9 13983 17078 22094 22396 15113 19386 19697 14019 18412 18310 15641 16390 23425 10048 21965 18017 12225 8863.6 14276 16683 22111 22165 15795 19857 19739 14597 18845 18319 16442 16631 23525 10692 21003 17043 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18661000 9128 1616 8626 17361;17362 13925;13926 13926 2 9606 Homo sapiens -0.029193794526918282 FSSPTEELDYR Unmodified 1342.6041 0.60411052 2335 O95359;O95359-5;Q4VXL4;O95359-2;D6RAA5;O95359-6;Q4VXL8;O95359-1;E7EMZ9;B2RWP4;O95359-3;E9PBC6;B7ZMJ9;E9PGB3;H0Y911 TACC2 Transforming acidic coiled-coil-containing protein 2 yes no 0 0 0 3 0 1 50.566 50.637 2 4.4397E-17 14405 20230619_1882_Aki_TMTPro18x_K_F3 192.91 161.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9129 2335 8627 17363 13927 13927 1 9606 Homo sapiens -0.05348737123904357 FSSQQAATK Unmodified 966.47706 0.47705951 3306 O75475;Q05CM9;O75475-3;O75475-2 PSIP1 PC4 and SFRS1-interacting protein yes no 0 0 0 8 0 1 39.279 39.266 3 0.00060826 9199 20230619_1888_Aki_TMTPro18x_K_F8 106.2 79.685 31488 16882 35287 34719 38955 45843 35989 43822 47352 27363 36395 37151 27478 28128 37012 22403 35011 28300 29082 15624 35583 33715 40125 45416 36831 44443 47077 28860 37487 36957 28815 28987 37274 22992 33471 26841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25563000 9130 3306 8628 17364 13928 13928 1 9606 Homo sapiens -0.0075199348757450934 FSSSGDFLVAGVGQEHR Unmodified 1791.854 0.85401105 3267 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 0 0 0 6.5 0.5 1 1 52.617 52.691 3 2.4739E-48 15056 20230619_1886_Aki_TMTPro18x_K_F6 224.67 200.79 71240 61832 75375 73491 69350 94303 78462 88432 104670 86666 79436 76213 82323 71183 86390 77671 86490 80067 65930 56696 76145 73552 72928 93597 79417 90642 104110 87406 82809 77665 84140 73951 87728 78121 82708 76046 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 167720000 9131 3267 8629 17365;17366 13929;13930 13929 2 9606 Homo sapiens -0.010241795183219438 FSSSSGYGGGSSR Unmodified 1234.5214 0.52144352 2786 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 5.33 3.09 1 1 1 36.362 36.38 2 2.0588999999999998E-36 8007 20230619_1888_Aki_TMTPro18x_K_F8 288.49 254.85 + 14065 12606 45237 41831 113980 78717 357470 28371 111920 8777.6 14888 21764 21640 172040 22376 10972 85679 21224 13252 11758 44670 40211 118210 75712 337420 32920 123470 10863 20435 26554 23094 163290 26131 14362 80919 20287 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 66654000 9132 2786 8630 17367;17368;17369 13931;13932;13933 13933 3 9606 Homo sapiens -0.08643634132022271 FSSYYLSLPPEMR Unmodified 1588.7596 0.7595653 3409 P08243-2;P08243;P08243-3;B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 3 0 1 62.457 62.487 2 0.0037748 19457 20230619_1882_Aki_TMTPro18x_K_F3 84.507 66.347 23070 15135 19630 19441 14774 19611 15606 15204 18993 23501 27746 28702 26094 21380 26132 28177 25331 27355 21279 13905 20150 19281 15795 19711 15813 16070 19517 23457 27991 28651 26673 22652 26541 28155 24258 25984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13485000 9133 3409 8631 17370 13934 13934 1 9606 Homo sapiens -0.011264095940077823 FSTIASSYEECR Unmodified 1448.6242 0.62419403 2654 B4E357;Q5JPB8;Q53HL4;Q53GT4;G3V1D3;G3V180;Q9NY33-4;Q9NY33 DKFZp686O1117;DPP3 Dipeptidyl peptidase 3 yes no 0 0 0 4.5 0.5 1 1 51.104 51.157 2 2.0885E-77 14262 20230619_1885_Aki_TMTPro18x_K_F5 386.46 370.24 159800 121200 140740 145260 129160 146930 152490 135290 144610 211110 204820 218550 226090 193600 185170 237350 226500 238860 147550 111200 144410 144770 135730 148210 152220 141110 150470 209400 208310 220610 228140 202840 191580 237740 216400 226800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 161200000 9134 2654 8632 17371;17372 13935;13936 13936 2 9606 Homo sapiens -0.08217309455608302 FSTLTDDPSPR Unmodified 1234.583 0.58298115 495 Q14C86-6;Q14C86;Q14C86-2;Q14C86-5;Q14C86-4;A0A024R8A2;A0A024R862;B3KN67 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 0 0 0 4.5 0.5 1 1 47.238 47.297 2 0.018505 12761 20230619_1883_Aki_TMTPro18x_K_F4 93.467 81.977 79818 57656 69959 81839 79552 83233 83482 88530 107660 106680 115240 121500 122360 104550 90653 123760 145780 152590 73676 53005 72098 80654 82004 84174 84706 90554 108620 107290 118180 122090 123210 109460 95963 125560 138990 144600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57969000 9135 495 8633 17373;17374 13937 13937 1 9606 Homo sapiens -0.0249270243277806 FSTPEQAAK Unmodified 977.48181 0.48181054 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;M0QYT0;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 0 0 6 0.816 1 1 1 43.347 43.432 2 3.6835E-06 10646 20230619_1887_Aki_TMTPro18x_K_F7 186.76 147.62 468600 304500 401430 447080 534600 539470 522660 512410 652740 526600 619940 606190 660170 547050 544320 523240 705640 607700 432230 280170 415620 440800 544390 537830 531530 525720 655900 534180 639130 609730 667030 565150 564250 531090 672910 576660 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1228300000 9136 1455;1520 8634 17375;17376;17377 13938;13939;13940 13940 3 9606 Homo sapiens -0.007831093448203319 FSTVAGESGSADTVRDPR Unmodified 1850.8759 0.8758687 1490 B4DWK8;A0A384P5Q0;P04040 CAT Catalase yes no 0 0 1 4.5 0.5 1 1 41.34 41.404 3 3.0125E-14 10151 20230619_1883_Aki_TMTPro18x_K_F4 117.13 105.22 107330 77346 83604 86887 102300 119120 115850 102370 160260 106720 125170 127450 112070 106150 123830 129130 141520 139690 98992 70936 87225 87399 105330 117620 117290 105870 159130 108390 129540 127760 115470 111360 126720 129970 135220 132570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 173760000 9137 1490 8635 17378;17379 13941;13942 13941 2 9606 Homo sapiens -0.015534195604232082 FSTWTNTEFR Unmodified 1287.5884 0.58840088 3394 P07099;R4SBI6 EPHX1 Epoxide hydrolase 1 yes no 0 0 0 1 0 1 55.618 55.618 2 3.9746E-19 16670 20230619_1880_Aki_TMTPro18x_K_F1 250.49 226.93 70201 56418 73019 64355 84084 108380 114850 118300 132920 93971 89337 90853 104320 81867 99679 96699 93473 102710 64928 51727 74115 64972 87403 106420 114500 119420 132540 96233 94399 92090 105740 85581 101080 97286 89558 97459 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81992000 9138 3394 8636 17380 13943 13943 1 9606 Homo sapiens -0.043889788503065574 FSTYTSDKDENK Unmodified 1433.6311 0.63105355 2690 B7Z592;Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes no 0 0 1 5 0.816 1 1 1 43.798 43.87 3 6.0839E-13 11147 20230619_1885_Aki_TMTPro18x_K_F5 195.8 164.32 327570 255190 314030 336770 352500 331780 324000 338260 388800 429810 440390 392880 448630 360980 344430 420120 467430 365260 302710 234340 320730 333320 362010 336190 330510 347530 394780 428280 449290 399520 452590 376590 359230 418000 445340 347890 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 341990000 9139 2690 8637 17381;17382;17383 13944;13945;13946 13945 3 9606 Homo sapiens -0.06841673303370044 FSVCVLGDQQHCDEAK Unmodified 1891.8193 0.8192818 3732 P62906;Q1JQ76 RPL10A 60S ribosomal protein L10a;Ribosomal protein yes no 0 0 0 4 1.22 1 2 2 2 1 50.233 50.295 3;4 1.2016E-33 14015 20230619_1886_Aki_TMTPro18x_K_F6 244.57 228.94 2121400 1565200 1819500 1974500 1633200 1944800 2113100 2188400 2124400 2360900 2129100 1949500 2555300 1907600 1845800 2732400 2385300 2415600 1958100 1436900 1871900 1960300 1725500 1974000 2103700 2222900 2165700 2363400 2201100 1998100 2559400 2014000 1924200 2711900 2277200 2297600 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5129400000 9140 3732 8638 17384;17385;17386;17387;17388;17389;17390;17391 13947;13948;13949;13950;13951 13951 5 9606 Homo sapiens -0.09095506712924362 FSVGGMTDVAEIK Unmodified 1352.6646 0.66460229 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0;K7ER27 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 6 0 1 60.796 60.854 3 2.6251E-05 18472 20230619_1886_Aki_TMTPro18x_K_F6 117.07 75.532 98293 83164 96604 105300 98890 106330 110260 114250 116050 127690 121980 136800 141370 112640 130170 149880 133300 148090 90895 76311 98362 104540 102810 107630 110730 116530 118240 128550 125840 137620 143080 118990 132850 149850 127610 140620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64603000 9141 2417 8639 17392 13952;13953 13953 2 9606 Homo sapiens 0.0023765693481436756 FSVLLLHGIR Unmodified 1153.6972 0.69716346 2556 B4DNR3;B4DQI4;F8W9U3;V9HW87;Q96IU4 ABHD14B;HEL-S-299 Alpha/beta hydrolase domain-containing protein 14B yes no 0 0 0 7 0 1 58.524 58.574 3 6.4128E-05 17227 20230619_1887_Aki_TMTPro18x_K_F7 114.4 75.253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9142 2556 8640 17393 13954 13954 1 9606 Homo sapiens 0.12646276910641063 FSVLPPTFHPGDQK Unmodified 1568.7987 0.798728 3018 Q13332;Q13332-6;Q13332-7;Q9UM81;G8JL96;Q13332-5;Q59FX6;Q13332-3;Q13332-4;Q13332-2;D6W633;D6W632 PTPRS;PTPsigma Receptor-type tyrosine-protein phosphatase S;Protein-tyrosine-phosphatase yes no 0 0 0 2 0 1 55.036 55.057 3 0.017145 16605 20230619_1881_Aki_TMTPro18x_K_F2 59.864 40.789 21723 18728 25742 24664 21224 23361 30615 26128 30049 30033 24444 26032 29471 24812 27970 21728 28315 27160 20124 17191 25746 24410 22631 23785 30296 26618 30437 30021 25584 26535 29846 25489 28450 22213 27081 25743 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18643000 9143 3018 8641 17394 13955 13955 1 9606 Homo sapiens 0.03708058751885801 FSVPGFK Unmodified 780.41703 0.41702544 3815 Q09666;B4DTV0 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 4 0 1 57.962 57.966 3 0.053342 17475 20230619_1883_Aki_TMTPro18x_K_F4 60.788 28.317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9144 3815 8642 17395 13956 13956 1 9606 Homo sapiens 0.01803360639848961 FSVSPVVR Unmodified 889.50215 0.50215205 3447 P13639;Q8TA90;Q6PK56 EEF2 Elongation factor 2 yes no 0 0 0 2.5 1.12 1 1 1 1 47.707 47.755 2 0.0022657 13096 20230619_1882_Aki_TMTPro18x_K_F3 129.47 103.57 1628200 1301000 1370000 1437300 1320300 1506900 1451500 1492600 1723100 1932800 1832500 1704900 2021000 1609500 1680400 2096900 1884900 1803900 1503400 1192500 1412700 1441900 1380300 1518600 1464900 1537300 1745900 1922600 1882100 1738500 2039800 1689400 1728300 2081800 1800900 1716700 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 7343199999.999999 9145 3447 8643 17396;17397;17398;17399 13957;13958;13959 13958 3 9606 Homo sapiens 0.05298106105658462 FSVVCVEK Unmodified 966.48445 0.48445308 4759 Q9Y6K1;Q59HC6;A0A0C4DG02;F8WE91;Q9Y6K1-2;A0A8I5KXG9;A0A8I5KNQ0 DNMT3A DNA (cytosine-5)-methyltransferase 3A yes no 0 0 0 8 0 1 53.361 53.436 2 0.0039757 15021 20230619_1888_Aki_TMTPro18x_K_F8 122.18 65.076 125350 101790 104530 116980 106750 119770 128130 120740 121270 135480 129570 126890 151250 122500 117300 161040 145820 146300 115740 93327 108040 116950 111300 120950 127740 123700 124380 135850 133460 129120 152050 128560 121690 160250 139250 139110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114880000 9146 4759 8644 17400 13960 13960 1 9606 Homo sapiens -0.0001297721150876896 FSVVSDK Unmodified 780.40177 0.4017693 4746 Q9Y5B9;Q0VGA3 SUPT16H FACT complex subunit SPT16 yes no 0 0 0 7 0.707 1 2 1 48.465 48.543 2;3 0.020999 13285 20230619_1886_Aki_TMTPro18x_K_F6 109.01 51.549 106250 92168 97657 100390 108660 121500 110970 106740 135840 115410 136500 143510 130870 112920 126720 137240 163730 139840 98216 84444 100100 101010 112130 120950 112520 110320 136920 117070 139820 143380 133610 118740 131020 137650 156130 132880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 736760000 9147 4746 8645 17401;17402;17403;17404 13961;13962 13961 2 9606 Homo sapiens 0.0027844905199572167 FSVYVTESQPDLSGK Unmodified 1655.8043 0.80426689 3882 Q14232;F5H0D0 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes no 0 0 0 7 0 1 59.02 59.069 3 7.043E-08 17421 20230619_1887_Aki_TMTPro18x_K_F7 134.88 118.94 52523 43930 47387 63244 40568 53927 55505 53199 58291 54985 58632 57165 62650 49380 60518 64447 54067 62362 48534 40369 48572 62118 43157 55183 55188 54487 59223 55542 60318 57697 63673 52005 61247 64394 51850 59223 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50244000 9148 3882 8646 17405 13963 13963 1 9606 Homo sapiens 0.002596927530476023 FSWNVWPSSR Unmodified 1264.5989 0.59890598 2974;1375 F5H365;Q15436;B4DSQ5;B4E0Q9;G3V4V1;G3V1W4;G3V3G5;G3V2R6;G3V5X8;G3V4Q2;G3V5K1;B4DRA5;B4DJW8;A0A2R8YFH5;Q15437;Q5QPE2;A0A2R8Y633;A0A2R8Y7S7;A0A2R8YF30 SEC23A;SEC23B Protein transport protein Sec23A;Protein transport protein Sec23B no no 0 0 0 6 0 1 62.042 62.094 2 0.0010815 19041 20230619_1886_Aki_TMTPro18x_K_F6 112.71 101.88 202420 161440 203120 166440 180510 234320 240380 235420 265210 154460 155910 116560 157630 110130 219520 145860 153800 106770 187150 147890 205800 168760 191160 231750 239590 238160 264010 159480 165090 120060 163590 115790 218080 144080 147470 102000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 330850000 9149 2974;1375 8647 17406 13964 13964 1 9606 Homo sapiens -0.02280951405214182 FSWPFREPVTR Unmodified 1420.7252 0.72516913 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 1 5 0 1 55.944 56.009 3 0.0068741 16263 20230619_1885_Aki_TMTPro18x_K_F5 71.176 41.432 50868 42781 52530 47269 50639 58198 51817 52530 51219 54393 48522 44640 48855 39726 54174 43521 44379 40470 47057 39206 53162 47540 52783 57898 52187 54090 52150 54566 49923 45581 50077 41356 54392 43546 42529 38485 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23057000 9150 4666 8648 17407 13965 13965 1 9606 Homo sapiens 0.03163555100081794 FSYLAVIEGAK Unmodified 1196.6441 0.64412484 2028 P18031;A8K3M3;B4DSN5 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type yes no 0 0 0 2 0 1 63.144 63.153 2 9.8794E-06 20058 20230619_1881_Aki_TMTPro18x_K_F2 166.55 132.47 53229 44079 54069 66113 53279 57046 63101 58108 61004 59917 64846 61655 63858 61188 66144 68924 69835 79345 49230 40527 54918 64799 55629 58383 62991 59383 62415 60515 66308 62527 65363 63532 67442 69712 66848 75217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31951000 9151 2028 8649 17408 13966 13966 1 9606 Homo sapiens 0.05366854337330551 FTAGDFSTTVIQNVNK Unmodified 1740.8683 0.86826413 384 Q9H3H0;A0A024R683;Q9Y5K8;G3V2S6;Q9NW63;G3V559;H0YJ55;H0YJS0 VATD;ATP6V1D V-type proton ATPase subunit D yes no 0 0 0 2 0 1 61.239 61.249 3 5.154E-11 19137 20230619_1881_Aki_TMTPro18x_K_F2 150.22 136.31 101960 86708 99143 84238 90343 111460 102170 104940 94525 86281 78330 101410 98545 55106 106500 101750 109570 81759 94280 79371 100740 85730 94915 110510 102140 107140 96120 88609 82233 100650 100140 60916 108290 100400 104620 77969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334430000 9152 384 8650 17409 13967 13967 1 9606 Homo sapiens 0.027464729099847318 FTASAGIQVVGDDLTVTNPK Unmodified 2032.0477 0.047685059 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2;A4QMW8 ENO1 Alpha-enolase;Enolase yes no 0 0 0 7.42 0.494 11 8 73.38 73.4 3 4.6908000000000005E-55 18603 20230619_1887_Aki_TMTPro18x_K_F7 280.31 255.83 612110 486930 598810 628860 537250 617060 631590 639030 640130 765620 773900 777020 853720 689270 764660 838260 770080 934250 565760 446970 608420 623160 565520 625200 631950 654660 657520 766810 791290 785250 864020 722050 779770 845100 737860 885720 12 12 13 15 15 15 15 15 15 14 16 15 15 15 14 16 14 15 4247999999.9999995 9153 293 8651 17410;17411;17412;17413;17414;17415;17416;17417;17418;17419;17420;17421;17422;17423;17424;17425;17426;17427;17428 13968;13969;13970;13971;13972;13973;13974;13975;13976;13977;13978;13979;13980;13981;13982;13983;13984 13968 17 9606 Homo sapiens 0.07294312407270809 FTAVEDQYYCVDCYK Unmodified 1959.8019 0.8019004 3865 Q13642-4;Q13642-5;Q13642-1;Q53FI7;B7Z4B7;B7Z5V0;B7Z9A1;B7Z5T3;B7Z6U8;B3KRI9;Q5JXI8;Q13642;A0A494C0D6 FHL1 Four and a half LIM domains protein 1 yes no 0 0 0 5 0.816 1 1 1 60.249 60.286 3 4.169E-08 18029 20230619_1885_Aki_TMTPro18x_K_F5 139.3 130.48 233400 187130 226350 239880 185170 191970 227760 231960 251600 314090 303830 346110 314280 261550 281870 350700 330910 373480 215730 171770 229960 237350 196660 198740 228060 236470 257340 313770 310010 346870 318870 277350 290300 352040 316430 354340 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 949500000 9154 3865 8652 17429;17430;17431 13985;13986;13987;13988 13987 4 9606 Homo sapiens -0.13960847038561042 FTCEMFHPNIYPDGR Unmodified 1882.8131 0.81307421 3677 P60604;P60604-2 UBE2G2 Ubiquitin-conjugating enzyme E2 G2 yes no 0 0 0 7 0 1 55.262 55.323 3 6.7648E-06 15877 20230619_1887_Aki_TMTPro18x_K_F7 119 108.8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9155 3677 8653 17432 13989 13989 1 9606 Homo sapiens -0.09301980153782097 FTCSESQVNSR Unmodified 1313.567 0.56701351 3435 Q59EZ3;P11717 IGF2R Cation-independent mannose-6-phosphate receptor yes no 0 0 0 4 0 1 37.143 37.187 2 4.8316E-17 8416 20230619_1883_Aki_TMTPro18x_K_F4 236.35 225.98 16499 9136.1 13887 22144 24849 27784 19308 19751 26413 22318 26579 29345 23578 20961 21800 16708 27971 27388 15205 8478.3 14538 21318 24818 27457 20001 20808 26502 22643 27145 29153 24085 21681 22509 17475 26699 25902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20298000 9156 3435 8654 17433 13990 13990 1 9606 Homo sapiens -0.07722731941316852 FTDADKETEIVK Unmodified 1394.6929 0.69292553 2225 B2R5U7;Q03701 CEBPZ CCAAT/enhancer-binding protein zeta yes no 0 0 1 4.5 0.5 1 1 49.359 49.415 3 0.033368 13524 20230619_1885_Aki_TMTPro18x_K_F5 56.328 42.422 61257 47271 49953 54988 55772 67694 60117 60624 85413 70874 83138 91770 92507 76892 66190 101860 95041 98519 56536 43355 51810 55066 57712 67318 61136 62697 85438 71755 85831 91736 92884 81110 69561 101660 90679 93597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230180000 9157 2225 8655 17434;17435 13991 13991 1 9606 Homo sapiens 0.011366781157448713 FTDEEVDELYR Unmodified 1414.6252 0.62523989 3147 Q53HL1;J3QRS3;P19105;O14950 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 0 0 0 1.5 0.5 1 1 56.021 56.03 2 4.6764E-17 16807 20230619_1880_Aki_TMTPro18x_K_F1 236.56 215.05 242340 186460 220170 239530 213450 278790 274880 263800 308500 352320 330280 357740 401410 329440 331930 403040 352890 407420 223840 171180 225610 238030 224290 278470 274620 272880 313550 351450 341110 361880 404020 344730 340320 403870 337820 386720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 794020000 9158 3147 8656 17436;17437 13992;13993 13992 2 9606 Homo sapiens -0.06548771815050713 FTDILVR Unmodified 862.49125 0.49125301 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 5.33 3.09 1 1 1 56.012 56.052 2 0.052122 16170 20230619_1888_Aki_TMTPro18x_K_F8 85.265 15.833 547080 488330 536580 594540 535930 590450 607440 584920 610290 698340 707480 572250 624850 509830 696780 585230 541740 516790 506070 447830 546300 591660 558510 597340 608570 601040 625790 695640 716990 584740 643300 532080 698100 583540 519660 491670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 523530000 9159 3246 8657 17438;17439;17440 13994;13995 13995 2 9606 Homo sapiens 0.05450703731378326 FTDLFEK Unmodified 898.44363 0.44363412 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B4DHD2;B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 7 0 1 61.511 61.55 2 0.053821 18473 20230619_1887_Aki_TMTPro18x_K_F7 89.296 39.937 218000 170740 213860 211980 194710 256740 239730 235980 250880 295030 299950 280950 320740 252860 302120 331530 324220 337580 201490 156690 217360 211300 205280 255640 239540 244040 257110 294510 306250 285030 325650 266060 308930 332130 310090 320520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 258230000 9160 3981 8658 17441 13996 13996 1 9606 Homo sapiens -0.009649952594713795 FTEDSLLR Unmodified 979.49746 0.4974606 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;A0A7I2V311;A0A7I2V5F6 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 4 0 1 51.837 51.865 2 2.3912E-05 14837 20230619_1883_Aki_TMTPro18x_K_F4 134.15 68.478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9161 442 8659 17442 13997 13997 1 9606 Homo sapiens 0.006891771722507656 FTEEIPLK Unmodified 975.5277 0.5276981 3211 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 5.5 0.5 1 1 56.78 56.846 2 0.0014074 16625 20230619_1885_Aki_TMTPro18x_K_F5 143.12 96.054 164860 144840 156770 160900 148430 162710 178810 172940 182050 188230 195210 194960 200230 183580 195830 215080 202610 215500 152450 132720 159840 161280 155620 164690 178660 176400 185850 189590 199930 197270 204070 191350 199690 215610 193870 204630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 172270000 9162 3211 8660 17443;17444 13998;13999 13998 2 9606 Homo sapiens 0.03895535837432362 FTEEVVK Unmodified 850.44363 0.44363412 2459 B4DE91;P49189;B4DX14;P49189-3;P49189-2;B4DYY1 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 4 0 1 48.792 48.83 2 0.013089 13438 20230619_1883_Aki_TMTPro18x_K_F4 114.43 27.558 364650 283850 299810 350650 389940 464960 408550 439650 588910 435160 509100 548490 554710 468020 454450 560120 633040 586610 336580 260480 311690 350070 399170 460770 416280 450610 586010 443820 528190 549040 560140 490270 474280 562570 603640 557060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143990000 9163 2459 8661 17445 14000 14000 1 9606 Homo sapiens 0.012430047405246114 FTEYETQVK Unmodified 1143.5448 0.54480473 291 Q13148;A0A0A0N0L3;A0A024R4E2;A0A0A0N0N3;A0A087WYY0;A0A087X260;G3V162;B1AKP7;K7EN94;A0A0A0N0M3;A0A087WX29;K7EJM5;B4DRW3;A0A087WV68;A0A087WXQ5;Q13148-4;A0A087WXV3;A0A087WX67;A0A087WW61 TARDBP;TDP43 TAR DNA-binding protein 43 yes no 0 0 0 4.5 0.5 1 1 49.837 49.892 3 1.9228E-05 13918 20230619_1883_Aki_TMTPro18x_K_F4 160.82 110.53 590060 498460 581580 607040 655440 705940 686380 679180 844110 757130 784800 789840 866740 716690 705570 878040 887730 793760 545660 457220 592770 605490 675870 705810 695080 697730 848570 762250 811450 798050 874400 750170 731270 874600 846960 755160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1051299999.9999999 9164 291 8662 17446;17447 14001;14002 14001 2 9606 Homo sapiens -0.021225883474244256 FTFEEAAK Unmodified 941.44945 0.44944778 628 E9PF17;A0A024RAP3;A0A024RAL1;A0A024RAQ9;Q59FG9;P13611-4;P13611-3;P13611-2;P13611-5;P13611;Q86W61;D6RGZ6 VCAN;CSPG2 Versican core protein yes no 0 0 0 4.5 0.5 1 1 52.839 52.887 2 0.0019621 15008 20230619_1885_Aki_TMTPro18x_K_F5 134.3 118.07 74153 52172 59519 51166 80647 96431 80758 78297 84471 108290 122460 141060 109040 95313 147050 96915 100480 110620 68395 47797 61964 52387 82190 93665 81544 81997 87435 108760 123480 140000 113450 99886 146020 98316 96663 104890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85105000 9165 628 8663 17448;17449 14003 14003 1 9606 Homo sapiens -0.023618967478228114 FTFGLDWVPK Unmodified 1208.623 0.62299547 1213;975 A0A140VJZ1;P45974-2;P45974;A0A7P0TB18;H7C5J3;A0A7P0TAP9;A0A0A6YZ17;Q92995;A0A7P0TB69;Q92995-2 USP5;USP13 Ubiquitin carboxyl-terminal hydrolase 5;Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 13 no no 0 0 0 3 0 1 64.425 64.457 3 0.0064427 20323 20230619_1882_Aki_TMTPro18x_K_F3 58.37 35.453 19762 19339 19821 21201 18184 18458 24838 23902 24034 25087 27862 26468 25077 23097 23950 28742 21980 26109 18296 17712 20116 21237 19173 19010 24635 24079 24677 25321 28277 26706 25634 24221 24295 28633 21078 24811 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20998000 9166 1213;975 8664 17450 14004 14004 1 9606 Homo sapiens 0.02702889028455502 FTGSELR Unmodified 808.40792 0.40791731 4793 yes no 0 0 0 4.5 0.5 2 2 39.963 40.029 2 0.0051349 9511 20230619_1885_Aki_TMTPro18x_K_F5 143.23 0 + 760850 635910 695330 733800 1074800 1041600 1002300 1016500 1291000 775940 974250 955690 962240 835820 867750 908060 1087700 877600 703130 583010 717690 737210 1083900 1029700 1023100 1033400 1284400 803550 1013700 958500 978460 869640 896300 909720 1037200 834640 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 901210000 9167 4793 8665 17451;17452;17453;17454 14005;14006 14006 2 9606 Homo sapiens -0.003950327164716327 FTIEQIDLLQR Unmodified 1374.7507 0.75071518 2817 H0YLF2;E5RGZ2;H0YKJ1;D3DSU2;Q6NT76-4;Q6NT76-2;Q6NT76-3;Q6NT76;Q6NT76-5;E5RHH9 HMBOX1 Homeobox-containing protein 1 yes no 0 0 0 7 0 1 62.469 62.504 3 0.016249 18932 20230619_1887_Aki_TMTPro18x_K_F7 62.705 49.697 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9168 2817 8666 17455 14007 14007 1 9606 Homo sapiens 0.07832984831838985 FTILDSQGK Unmodified 1007.5288 0.52876073 2154 A8KAK1;Q9NYU2-2;Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 5.33 3.09 1 1 1 55.409 55.47 2;3 6.285E-05 16638 20230619_1880_Aki_TMTPro18x_K_F1 129.38 77.528 75194 59502 76480 92248 80991 92587 90929 80321 103120 98612 103110 116900 96325 93240 110280 108580 112000 122220 69525 54739 77758 90400 84061 93278 91461 83463 104350 99254 105630 116980 99271 97726 111990 109640 107220 115900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41450000 9169 2154 8667 17456;17457;17458 14008;14009 14008 2 9606 Homo sapiens 0.025297502063381216 FTISDHPQPIDPLLK Unmodified 1719.9196 0.91957142 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 7.5 0.5 1 1 59.036 59.081 3 0.027917 17432 20230619_1888_Aki_TMTPro18x_K_F8 48.899 26.02 84240 68360 75451 82724 85581 90473 92314 94469 89644 97860 97644 88186 100860 74522 100060 96803 89263 80652 77824 62708 77573 82476 88235 91005 92624 96302 91856 98382 99909 89537 102700 78537 101150 96041 85451 76807 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31407000 9170 2126 8668 17459;17460 14010 14010 1 9606 Homo sapiens 0.08840841674714284 FTISEAVLER Unmodified 1163.6186 0.61863837 2848 Q9UPQ0-10;Q9UPQ0;D6RD46;Q9UPQ0-2;Q9UPQ0-4;G5EA03;E9PDJ9;B7Z2J4;E7EPK0;Q9UPQ0-3;Q9UPQ0-8;Q9UPQ0-5;Q9UPQ0-6;H0Y8P3;Q9UPQ0-9;B7Z5Q8;B7Z3F1;B7Z3G0;B7Z5G6;B7Z656 LIMCH1 LIM and calponin homology domains-containing protein 1 yes no 0 0 0 5.5 0.5 1 1 57.561 57.619 2 9.2057E-06 16889 20230619_1885_Aki_TMTPro18x_K_F5 166.07 136.26 70890 58078 63170 56449 58736 74427 63267 65562 69418 63207 77619 91379 65526 72000 88084 85483 77787 98643 65491 53171 64711 57432 61583 73700 63759 67524 70652 64866 78865 90819 68432 75542 88602 86431 74670 93476 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47810000 9171 2848 8669 17461;17462 14011;14012 14011 2 9606 Homo sapiens 0.04337379814887754 FTITPPTAQVVGVLK Unmodified 1569.913 0.91302948 3638 P52907;A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 yes no 0 0 0 4.5 0.5 1 1 62.856 62.882 3 1.7147E-10 19521 20230619_1883_Aki_TMTPro18x_K_F4 148.72 124.43 184080 190430 165790 175570 144580 168240 180300 166320 194450 243020 217720 193840 243080 205990 222160 280130 222880 258130 170350 174130 169690 178600 152920 170790 180190 172130 198500 239970 223250 199570 246270 216050 226660 278900 213490 245270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2084099999.9999998 9172 3638 8670 17463;17464 14013;14014 14013 2 9606 Homo sapiens 0.15086948513953757 FTKPELDACDVPEK Unmodified 1647.7814 0.78142296 3291 O75061-4;O75061;O75061-2;S4R305;O75061-3 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes no 0 0 1 6 0 1 52.475 52.552 3 6.506E-05 15006 20230619_1886_Aki_TMTPro18x_K_F6 100.68 79.867 70234 58744 67032 67211 39962 43593 57555 57254 57250 97942 85961 91939 98434 77740 76364 104620 99797 109750 64928 53852 67943 66917 44114 46227 57077 58661 59670 96521 87413 93082 98984 82130 79493 104900 95328 104150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45772000 9173 3291 8671 17465 14015 14015 1 9606 Homo sapiens -0.016556496361090467 FTLAGHTK Unmodified 873.47085 0.47085192 3700 P61964;V9GZ59;V9GYQ5 WDR5 WD repeat-containing protein 5 yes no 0 0 0 3 0 1 41.87 41.932 3 0.0007358 10424 20230619_1882_Aki_TMTPro18x_K_F3 123.21 87.382 413130 294360 409870 396630 392680 426110 399590 403360 495560 415890 447940 415110 407020 348720 394150 421430 475050 434360 381670 270460 416240 392550 409530 428090 405610 414000 497260 419770 459800 419330 416220 365770 405620 422990 453460 412570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127320000 9174 3700 8672 17466 14016 14016 1 9606 Homo sapiens 0.02905533071566424 FTLNPNPTGVQNPHIER Unmodified 1932.9806 0.98060855 2486 B4DH44;P45985;P45985-2 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 yes no 0 0 0 1 0 1 48.114 48.114 3 3.9788E-09 13590 20230619_1880_Aki_TMTPro18x_K_F1 124.68 99.146 19425 19398 21650 20937 19902 27515 25690 20459 28045 25301 27911 27412 29147 22497 25823 26794 29002 35135 18003 17762 21788 21109 21002 27156 25629 21533 28419 25389 28693 27565 29536 23622 26499 27317 27761 33261 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30795000 9175 2486 8673 17467 14017 14017 1 9606 Homo sapiens 0.0514374670685811 FTLRDEGK Unmodified 964.49779 0.49779495 3455;2572 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6;B4DQM6;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B no no 0 0 1 7 0.816 1 1 1 42.407 42.465 3 0.0020264 10244 20230619_1887_Aki_TMTPro18x_K_F7 125.16 34.452 538170 415070 482810 511280 665010 622920 567540 593900 705520 643230 683110 599610 709980 547360 603510 767540 716480 592270 497030 380890 497800 509920 673190 621070 582190 609820 710120 646270 702410 609570 718420 578000 622670 757510 683570 564860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1141600000 9176 3455;2572 8674 17468;17469;17470 14018;14019 14019 2 9606 Homo sapiens 0.01412596892100737 FTMELAK Unmodified 838.42588 0.42587556 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;P00367-3;A0A804HJD7;B3KT18;A0A804HKE0;P00367-2;P49448;A0A140VK14;Q59FQ4 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 8 0 1 55.515 55.577 2 0.053956 15958 20230619_1888_Aki_TMTPro18x_K_F8 77.282 28.721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9177 2542 8675 17471 14020 14020 1 9606 Homo sapiens 0.00019966214017586026 FTMVQVWPVR Unmodified 1261.6641 0.66414878 3566 P38606-2;P38606;A0A994J738;C9JVW8;C9JA17 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 0 6 0 1 62.555 62.606 2 0.0015255 19280 20230619_1886_Aki_TMTPro18x_K_F6 120.15 98.024 276470 270600 256830 256760 187110 279990 271510 248440 319500 289610 259130 275370 319430 294740 331000 314700 295560 309470 255810 247540 261580 260950 202810 280650 270330 257170 320370 290230 271580 280800 324790 304370 334330 315730 283230 293940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313040000 9178 3566 8676 17472 14021 14021 1 9606 Homo sapiens 0.04378326796290821 FTPELQPK Unmodified 958.51238 0.51238239 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;A0A1U9XBD9;A0A1U9XBC3;Q14676-3;B4DYH4;Q14676-4 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 0 7.33 0.471 2 1 50.852 50.929 2;3 0.034046 14027 20230619_1887_Aki_TMTPro18x_K_F7 81.594 17.387 104950 82551 95860 105310 93761 115100 107580 100760 149660 115460 119620 117920 131170 108800 110520 144940 146050 145400 96955 75775 98175 104590 98116 115280 108940 104360 148780 116080 124610 119360 132560 114460 114900 144980 139390 138100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 149950000 9179 1308 8677 17473;17474;17475 14022;14023 14022 2 9606 Homo sapiens 0.031466690402339736 FTPGTFTNQIQAAFR Unmodified 1697.8526 0.85255449 205 C9J9K3;A0A8V8TMX1;A0A024R2L6;A0A0C4DG17;A0A8V8TLA4;P08865;Q96RS2;A0A8V8TMP3 RPSA 40S ribosomal protein SA yes no 0 0 0 6 0 1 62.724 62.775 2 1.2296E-18 19368 20230619_1886_Aki_TMTPro18x_K_F6 260.22 248.01 376780 301570 362400 385860 374090 545920 405330 393970 194480 224720 207750 137140 154370 129660 266610 190880 186310 119430 348240 276810 369820 384660 389020 535940 400570 408440 210820 233410 210120 143340 164480 137210 264270 187110 178580 114440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 463350000 9180 205 8678 17476 14024 14024 1 9606 Homo sapiens 0.03154231183611955 FTPGTFTNQIQAAFREPR Unmodified 2080.049 0.049022463 205 C9J9K3;A0A8V8TMX1;A0A024R2L6;A0A0C4DG17;A0A8V8TLA4;P08865;Q96RS2;A0A8V8TMP3 RPSA 40S ribosomal protein SA yes no 0 0 1 6 0 1 61.215 61.27 3 1.3837E-30 18652 20230619_1886_Aki_TMTPro18x_K_F6 236.16 214.57 673310 775770 725710 533290 575010 385340 569030 703690 400830 588150 525640 400300 524550 387300 507670 626750 602040 401100 624580 707810 728930 558520 606420 409920 570090 693290 423910 593880 532740 415290 534260 412690 522330 613020 573720 384100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 811990000 9181 205 8679 17477 14025 14025 1 9606 Homo sapiens 0.05219991286685399 FTPPPQPQQCMEFDK Oxidation (M) 1864.8124 0.81240551 3847 Q13308;Q13308-6;Q13308-4;Q13308-5;Q59FV9 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 1 0 6 0 1 51.802 51.879 3 0.00038172 14707 20230619_1886_Aki_TMTPro18x_K_F6 85.909 77.309 43980 43331 56836 48736 42051 57978 39676 43942 60133 52453 56796 60405 58120 51869 56724 63682 59256 60479 40818 39695 56394 48917 44887 57591 40833 46087 59951 52830 58509 60673 59230 54386 57885 63610 56680 57473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65503000 9182 3847 8680 17478 14026 14026 2522 1 9606 Homo sapiens -0.08540819593531523 FTPPPQPQQCMEFDK Unmodified 1848.8175 0.81749089 3847 Q13308;Q13308-6;Q13308-4;Q13308-5;Q59FV9 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 6.5 0.5 1 1 55.718 55.787 3 1.8568E-10 16062 20230619_1887_Aki_TMTPro18x_K_F7 146.96 128.13 46635 38503 45015 44254 39179 47206 48847 44969 49575 60455 54656 65098 60128 51133 59194 62697 60867 68842 43112 35300 45777 44275 41442 47463 48724 46523 50730 60381 56164 65346 61147 53826 60323 63153 58276 65292 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108280000 9183 3847 8680 17479;17480 14027 14027 1 9606 Homo sapiens -0.07296515730899955 FTQAGSEVSALLGR Unmodified 1434.7467 0.74669243 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W0P7 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 1.5 0.5 1 1 61.433 61.439 2 7.6779E-16 19058 20230619_1880_Aki_TMTPro18x_K_F1 228.78 205.26 745810 670970 704460 829660 685670 818290 876880 877370 945280 968080 948510 967310 1015000 893590 955090 1132000 970920 1086200 689750 615400 719710 824670 719330 829550 875180 894720 959510 973370 976190 979770 1031200 936640 974170 1130600 929610 1031700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 647370000 9184 3391 8681 17481;17482 14028;14029 14028 2 9606 Homo sapiens 0.04670895338131231 FTQDTQPHYIYSPR Unmodified 1751.8267 0.82673367 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 8 0 1 45.159 45.187 3 6.7294E-37 11521 20230619_1888_Aki_TMTPro18x_K_F8 228.33 203.47 59999 52753 54084 53709 51406 65531 64673 73828 76841 70413 67570 79018 74350 75078 74882 78191 87026 82061 55460 48302 55407 54367 54060 65553 64833 74710 77219 71608 70156 79661 75795 77685 76819 78744 83114 77919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 526230000 9185 3881 8682 17483 14030 14030 1 9606 Homo sapiens -0.019106630586747997 FTQLDLEDVQVR Unmodified 1461.7464 0.74635808 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;Q6NSG3;Q58F29;Q6P169;C9JR83 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 4 0 1 60.155 60.157 2 1.0858E-25 18386 20230619_1883_Aki_TMTPro18x_K_F4 224.66 178.98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9186 4593 8683 17484 14031 14031 1 9606 Homo sapiens 0.03395475618276578 FTQQNYHDR Unmodified 1207.537 0.53703401 2806 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;Q9BZE4-2;O60747;Q5T3R7 GTPBP4 Nucleolar GTP-binding protein 1 yes no 0 0 0 5 0.816 1 1 1 31.775 31.833 3 1.3442E-08 6338 20230619_1885_Aki_TMTPro18x_K_F5 176.6 157.82 122520 63632 111430 118780 156460 144080 134510 144250 171900 141980 152580 150950 185360 151190 130870 131210 192020 161270 112940 58808 114800 115670 158220 143750 138050 147230 172220 143960 158810 152810 185560 154980 137380 133890 182920 152970 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 215480000 9187 2806 8684 17485;17486;17487 14032;14033;14034;14035 14033 4 9606 Homo sapiens -0.05843302824359853 FTQSYDYLTDEEER Unmodified 1794.7584 0.75843891 4023 Q59EK9-4;Q59EK9-2;Q59EK9-3;Q59EK9 RUNDC3A RUN domain-containing protein 3A yes no 0 0 0 2 0 1 55.741 55.762 2 0.0020146 16880 20230619_1881_Aki_TMTPro18x_K_F2 88.282 74.376 8870.3 6668.2 4944.6 7594.1 4200.4 5658.8 4401.5 7764.3 6674.2 7938.2 9502.6 9551.2 8400.4 9040.9 8502.7 9090.9 8910.1 11300 8167.9 6115.2 5352.9 7568.5 4451.5 5916.5 4509.2 7784.9 6784.7 8056.5 9568 9607.1 8624.7 9339.5 8671.2 9257.1 8537.7 10700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5311000 9188 4023 8685 17488 14036 14036 1 9606 Homo sapiens -0.10714997219861289 FTRPLFK Unmodified 907.52797 0.52797287 1222 A0A140VK27;P09960;B4DVZ8;P09960-4;Q49AK0 LTA4H Leukotriene A-4 hydrolase;Leukotriene A(4) hydrolase yes no 0 0 1 7 0.816 1 1 1 48.279 48.357 3 0.037881 12783 20230619_1887_Aki_TMTPro18x_K_F7 66.682 40.08 309250 290780 297420 305720 338070 395830 333500 327860 352510 316350 328780 294440 319450 271880 328210 366360 331940 299260 286130 266260 303800 308790 348010 391930 337150 339300 357070 319790 337890 299430 326760 286100 334000 362800 317340 285070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202250000 9189 1222 8686 17489;17490;17491 14037 14037 1 9606 Homo sapiens 0.07051000347928493 FTSLRPLLGGIPESGGPDAR Unmodified 2039.08 0.079988241 1301 B3KQU6;A0A1U9X845;Q8IXM6-2;Q8IXM6 NRM Nurim yes no 0 0 1 3 0 1 59.717 59.745 3 3.8664E-16 18286 20230619_1882_Aki_TMTPro18x_K_F3 159.03 141.95 76034 65906 72368 83467 69135 87148 79968 87300 94569 83899 94542 94010 92107 86629 97123 95561 97154 111850 70305 60470 73851 82888 72469 87813 80486 89078 95464 85298 96913 94755 94375 90062 98671 96805 93058 106010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147220000 9190 1301 8687 17492 14038 14038 1 9606 Homo sapiens 0.10201144600955558 FTTGDAMSK Oxidation (M) 972.42225 0.42224675 1447 Q14019;A0A384MTY2 COTL1 Coactosin-like protein yes no 0 1 0 5.5 0.5 1 1 41.46 41.554 2 0.00054761 10192 20230619_1886_Aki_TMTPro18x_K_F6 125.83 95.482 96338 69391 91936 90878 162960 178120 166640 176120 215030 153180 176970 196060 188970 170770 171010 175300 218190 198700 88981 63736 94873 91156 163800 173380 169170 179290 214600 157460 184000 196200 191770 177180 176820 177410 208170 188550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192110000 9191 1447 8688 17493;17494 14039;14040 14040 940 2 9606 Homo sapiens -0.06506748350489033 FTTGDAMSK Unmodified 956.42733 0.42733213 1447 Q14019;A0A384MTY2 COTL1 Coactosin-like protein yes no 0 0 0 6.5 0.5 2 2 46.7 46.786 2;3 4.5076E-08 12496 20230619_1886_Aki_TMTPro18x_K_F6 200.88 144.97 237580 178130 223450 213920 362220 396460 376100 363350 490740 380060 397830 443190 466950 375540 376990 407750 505110 439170 219460 163440 230290 215520 365780 386240 381600 373700 489500 385390 415780 444580 470130 391420 392110 410950 481590 417040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 590520000 9192 1447 8688 17495;17496;17497;17498 14041;14042 14041 2 9606 Homo sapiens -0.052624444878802024 FTTYEIR Unmodified 928.46543 0.46543219 3277 O60493;O60493-2;O60493-3 SNX3 Sorting nexin-3 yes no 0 0 0 6.5 0.5 1 1 48.091 48.175 2 0.0045027 12720 20230619_1887_Aki_TMTPro18x_K_F7 147.83 88.85 351480 288310 306980 355690 345510 404950 389770 354920 427440 371320 361770 339550 383780 316570 344950 398180 414690 348860 324670 264510 316480 354230 357310 404550 391440 366590 430630 373610 375100 345520 389180 331640 355570 395940 395640 332120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 287230000 9193 3277 8689 17499;17500 14043 14043 1 9606 Homo sapiens -0.0016619051091311121 FTTYEVR Unmodified 914.44978 0.44978213 882 Q3SYF1;A0A087X0R6;Q9UMY4;Q9UMY4-1 SNX12 Sorting nexin-12 yes no 0 0 0 6 0 1 44.968 45.057 2 0.0045027 11705 20230619_1886_Aki_TMTPro18x_K_F6 147.83 107.38 128070 108470 124880 134410 138400 143900 147520 148200 167920 128400 137640 136220 133170 116030 155000 154470 169030 144400 118430 99513 127380 133750 142880 144910 148830 150590 168580 131120 142510 137330 137160 122350 157990 154060 161420 137350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205520000 9194 882 8690 17501 14044 14044 1 9606 Homo sapiens -0.010864770279567892 FTVAELK Unmodified 806.4538 0.45380487 3850 Q13435;E9PPJ0;Q7Z3K9 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 0 7.5 0.5 1 1 55.1 55.164 2 0.017823 15798 20230619_1888_Aki_TMTPro18x_K_F8 108.09 55.451 345590 286530 286680 338300 310280 376430 386570 346900 399850 370890 421720 382560 406470 340350 326300 438980 425010 415680 319130 262750 296890 337860 322820 377030 385630 357210 407270 373990 430640 386710 411560 357670 339290 437900 405620 395100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 522860000 9195 3850 8691 17502;17503 14045 14045 1 9606 Homo sapiens 0.042836124657469554 FTVETACK Unmodified 954.44807 0.44806757 1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 0 0 0 6.5 0.5 1 1 46.965 47.051 2 0.0012088 12218 20230619_1887_Aki_TMTPro18x_K_F7 146.54 110.35 48367 40745 50905 48169 50094 54850 47796 50501 59978 48284 57384 57177 60829 49346 49835 66976 68191 57384 44751 37362 51463 48140 52045 54866 48730 51832 60273 49212 59133 57423 61457 52078 51972 66435 64992 54645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45827000 9196 1843 8692 17504;17505 14046 14046 1 9606 Homo sapiens -0.030978541082276934 FTVETASR Unmodified 909.4556 0.45559579 3433 P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 5 0.816 1 1 1 41.109 41.184 2 0.00011023 9986 20230619_1885_Aki_TMTPro18x_K_F5 178.99 139.33 374210 277340 323590 327300 311470 402230 328370 321080 456680 385240 429410 388440 456310 346510 329500 396310 420320 375490 345430 254440 332800 327430 325790 399090 334120 335350 456650 386280 442530 392890 458600 361620 342650 396150 400970 357020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 500740000 9197 3433 8693 17506;17507;17508 14047;14048;14049 14047 3 9606 Homo sapiens -0.0027537851628949284 FTVGDHSR Unmodified 917.43553 0.43552905 4000 Q59ER5;Q53H17;Q53GN4 WDR1 yes no 0 0 0 5 0.816 1 1 1 33.187 33.248 3 2.0832E-07 7005 20230619_1886_Aki_TMTPro18x_K_F6 182.73 140.62 96566 67091 84350 93096 120060 125120 110720 114070 130150 102180 114610 123560 122670 95525 100310 109960 130720 112830 89114 61672 87288 92263 121620 123820 112760 116950 130810 104600 118710 123490 123860 100250 104120 110410 124650 107210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159370000 9198 4000 8694 17509;17510;17511 14050;14051 14051 2 9606 Homo sapiens -0.026491294562333678 FTVLFPSGTPLPAR Unmodified 1501.8293 0.82929985 3817 Q0VDF9 HSPA14 Heat shock 70 kDa protein 14 yes yes 0 0 0 5.5 0.5 1 1 63.086 63.133 2 0.089587 19439 20230619_1886_Aki_TMTPro18x_K_F6 68.563 37.191 79875 65147 71501 80233 68313 85126 80109 81987 100280 78251 76299 77179 84716 73520 83640 90205 81895 79293 73792 59771 73347 79848 71654 85611 80707 83879 100010 79303 79801 78305 86163 76819 85009 89760 78355 75438 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141780000 9199 3817 8695 17512;17513 14052 14052 1 9606 Homo sapiens 0.09845837136936098 FTVLTESAAK Unmodified 1065.5706 0.57062555 2388 B3KQI5;P07196;B3KXJ0;Q8TCR7;B4DR43 NEFL;DKFZp761K0922 Neurofilament light polypeptide no no 0 0 0 8 0 1 54.397 54.464 2 2.4836E-16 15473 20230619_1888_Aki_TMTPro18x_K_F8 223.32 178.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9200 2388 8696 17514 14053 14053 1 9606 Homo sapiens 0.04046305894826219 FTVPMLK Oxidation (M) 850.46226 0.46226107 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 0 1 0 3.67 0.471 1 2 56.61 56.627 3 0.021474 16972 20230619_1882_Aki_TMTPro18x_K_F3 70.268 42.161 148660 117260 139800 141420 143220 140390 146860 149020 152480 149070 155270 137870 150920 121620 150940 172290 161830 156430 137370 107570 142770 140870 148450 142310 148100 151650 155160 150290 158900 140060 154140 128690 154210 171370 154690 148760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144210000 9201 150 8697 17515;17516;17517 14054;14055 14054 79 2 9606 Homo sapiens 0.031048431107365104 FTVPMLK Unmodified 834.46735 0.46734645 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 0 0 0 4.2 0.748 1 2 2 60.526 60.554 2;3 0.006075 18542 20230619_1883_Aki_TMTPro18x_K_F4 135.87 94.363 539020 427960 513490 480110 369400 514340 552210 524440 578490 580480 619020 601520 668220 561020 593230 675300 675650 695650 498130 392330 521550 481340 400830 517580 547150 536640 589370 584290 635260 608560 676850 586180 609560 677680 645800 660440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 511280000 9202 150 8697 17518;17519;17520;17521;17522 14056;14057 14056 2 9606 Homo sapiens 0.0434914697335671 FVADGIFK Unmodified 895.48035 0.48035398 3494 P23396;P23396-2;Q53G83;E9PL09;E9PPU1;H0YCJ7;F2Z2S8;E9PK82;E9PJH4;E9PQ96;E9PQX2 RPS3 40S ribosomal protein S3 yes no 0 0 0 4 2.92 2 2 1 1 2 59.78 59.802 2;3 0.0014997 17698 20230619_1888_Aki_TMTPro18x_K_F8 113.89 64.53 1594300 1229000 1346300 1624700 1334100 1530300 1545900 1478200 1771500 1731300 1496800 1477400 1855900 1461000 1551600 1863600 1809100 1763000 1471800 1128700 1389800 1606500 1393700 1553200 1553200 1521000 1782000 1728800 1564200 1511100 1867900 1529700 1599000 1859700 1728100 1675700 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 3743599999.9999995 9203 3494 8698 17523;17524;17525;17526;17527;17528;17529;17530 14058;14059;14060;14061;14062;14063 14062 6 9606 Homo sapiens 0.028433013570861476 FVAELWK Unmodified 891.48544 0.48543935 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 0 2 0 1 62.188 62.198 2 0.059832 19617 20230619_1881_Aki_TMTPro18x_K_F2 81.784 33.61 64549 57685 66448 71329 59852 72719 61401 65181 78303 64538 61218 62221 72830 59704 70007 72196 68019 73814 59736 52909 67271 70927 62809 73243 62373 67101 78124 65229 64139 63201 73817 62351 71141 72436 65140 70071 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63235000 9204 3549 8699 17531 14064 14064 1 9606 Homo sapiens 0.03535605219701665 FVAFSGEGQSLR Unmodified 1296.6463 0.64625011 4010 Q541A5;Q92890;Q92890-1 ufd1;UFD1L Ubiquitin fusion degradation protein 1 homolog yes no 0 0 0 7.5 0.5 1 1 53.337 53.408 2 4.7027E-13 15015 20230619_1888_Aki_TMTPro18x_K_F8 211.86 165.46 190140 158500 178790 200130 162310 199210 200280 212100 239720 250370 218720 225830 245960 223300 198930 316770 292010 295010 175750 145440 182470 198680 171150 201750 201000 216770 241300 250230 226590 230400 248170 235310 208910 315220 278520 280430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313550000 9205 4010 8700 17532;17533 14065 14065 1 9606 Homo sapiens 0.009792830751621295 FVALENISCK Unmodified 1179.5958 0.59579444 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;B4DG89 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 0 1 0 1 58.647 58.647 2 0.00069235 17954 20230619_1880_Aki_TMTPro18x_K_F1 118.71 86.951 40279 34943 36585 41787 38670 42205 49700 45521 51794 48363 46204 41396 59064 43437 46806 56441 51918 55448 37231 32042 37543 41649 40293 42728 49515 46360 52432 48523 48196 42450 59248 45469 48146 56422 49650 52662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78169000 9206 534 8701 17534 14066 14066 1 9606 Homo sapiens 0.013180374257672156 FVAPEEVLPFTEGDILEK Unmodified 2032.0405 0.040474416 3612 Q9BPX4;Q53XC2;P49770 EIF2B2 Translation initiation factor eIF-2B subunit beta yes no 0 0 0 4.5 0.5 1 1 64.908 64.935 3 3.2851E-10 20128 20230619_1885_Aki_TMTPro18x_K_F5 142.4 127.14 130980 110660 122390 142030 119990 137080 130920 135490 141880 164300 157160 157750 166740 143690 163440 193530 167420 180700 121080 101560 125130 140770 125170 138950 131770 139310 144670 164250 160980 160010 169730 151300 166650 192870 160240 171720 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 173760000 9207 3612 8702 17535;17536 14067;14068;14069 14069 3 9606 Homo sapiens 0.06573579806854468 FVATQAAVPPAEELAFTDSLITR Unmodified 2446.2744 0.27439053 2637 B4E069;H0YLH3;Q6FHF7;Q92696 RABGGTA Geranylgeranyl transferase type-2 subunit alpha yes no 0 0 0 7 0 1 64.305 64.334 3 3.3261E-05 19824 20230619_1887_Aki_TMTPro18x_K_F7 82.885 74.598 86015 74912 92052 94800 76095 79368 86746 91078 107070 119070 105300 103270 114450 91857 96957 139610 126980 118300 79614 68732 92769 93926 80563 81724 87531 92985 107960 118320 108490 105220 115690 97665 100790 138200 121140 112620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89408000 9208 2637 8703 17537 14070 14070 1 9606 Homo sapiens 0.10910431175580015 FVAVTSSNAAK Unmodified 1093.5768 0.57677356 4008 Q53SW3;Q9BPU6 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 2 0 1 46.958 47.034 2 0.00021587 13051 20230619_1881_Aki_TMTPro18x_K_F2 150.35 113.33 125520 104970 146050 140620 110440 91390 107310 103260 88259 222430 265450 269250 304620 249830 175660 209930 319950 290010 116230 96383 146000 138470 117090 96553 108070 107970 98541 219580 265560 270350 303480 256390 189000 216010 304530 274710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169390000 9209 4008 8704 17538 14071 14071 1 9606 Homo sapiens 0.03372824126381602 FVCYCEGEESGEGDR Unmodified 1792.6669 0.66686349 4442 Q9BUH6;Q9BUH6-2 C9orf142 Protein PAXX yes no 0 0 0 1 0 1 46.422 46.422 3 1.7401E-10 12892 20230619_1880_Aki_TMTPro18x_K_F1 148.41 147.04 20492 14383 15509 18882 19408 23859 22506 22541 27942 22561 25062 24143 30210 25954 23723 28675 29677 27941 18893 13213 16255 18757 19973 23707 22670 23115 28028 22867 26062 24517 30369 26854 24592 28719 28326 26553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14761000 9210 4442 8705 17539 14072 14072 1 9606 Homo sapiens -0.19776327180329645 FVDEEDGGDGQAGPDEGEVDSCLR Unmodified 2552.0245 0.024519369 3245 O15511;B1ALC0;O15511-2;Q6IPM3 ARPC5 Actin-related protein 2/3 complex subunit 5 yes no 0 0 0 1 0 1 52.982 52.982 3 1.3916000000000001E-45 15564 20230619_1880_Aki_TMTPro18x_K_F1 242.34 235.54 23125 19659 20163 26645 18215 31267 24940 25932 31105 28581 30254 40606 41811 40750 22852 53839 48308 55080 21366 18051 20755 26374 19360 31107 24947 26938 31304 29127 31632 40696 41473 42690 25150 53861 46022 52278 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 240240000 9211 3245 8706 17540 14073 14073 1 9606 Homo sapiens -0.1894119102098557 FVDGEWYR Unmodified 1070.4821 0.48214489 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 4.5 0.5 1 1 54.289 54.305 2 0.0016495 15540 20230619_1885_Aki_TMTPro18x_K_F5 129.55 99.981 122200 109400 125820 119280 110960 126600 126080 143610 152660 150810 156010 144480 162320 140140 145590 168940 169230 174860 113090 100220 127250 119840 116890 127880 127160 145650 154170 151830 160100 146900 164700 146240 149780 169570 161730 166000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142810000 9212 1229 8707 17541;17542 14074;14075 14075 2 9606 Homo sapiens -0.050276896249670244 FVDGLMIHSGD Oxidation (M) 1205.5387 0.53867349 2923 E9PJN9 RPS3 yes yes 0 1 0 3 0 1 54.143 54.191 2 0.053627 16029 20230619_1882_Aki_TMTPro18x_K_F3 60.91 48.684 58350 43606 46769 64679 72494 70690 67759 60051 82804 44129 42129 42602 51551 35771 48012 47165 51307 55186 53837 40103 48961 63603 73112 70780 68984 61699 81791 45492 45563 43107 52115 37784 49060 47659 49085 52317 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20155000 9213 2923 8708 17543 14076 14076 1739 1 9606 Homo sapiens -0.05587429850606895 FVDGLMIHSGDPVNYYVDTAVR Oxidation (M) 2483.1791 0.17910994 3494 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;Q9NQS8;A7E2S3;E9PSF4 RPS3 40S ribosomal protein S3 yes no 0 1 0 6.5 0.5 1 1 61.273 61.319 3 8.6116E-31 18324 20230619_1887_Aki_TMTPro18x_K_F7 203.23 200.11 194380 157670 165560 198820 201580 191030 201780 198930 190260 238130 248810 231380 244160 202180 215460 291850 232710 263330 179510 144700 171280 197280 206290 194040 203140 203760 197040 238220 252190 234390 247920 214250 221000 290000 222700 250310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2109499999.9999998 9214 3494 8709 17544;17545 14077 14077 2163 1 9606 Homo sapiens -0.0031524528708359867 FVDGLMIHSGDPVNYYVDTAVR Unmodified 2467.1842 0.18419532 3494 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;Q9NQS8;A7E2S3;E9PSF4 RPS3 40S ribosomal protein S3 yes no 0 0 0 7 0 1 62.269 62.304 3 9.4184E-31 18838 20230619_1887_Aki_TMTPro18x_K_F7 205.68 181.09 153360 108490 161510 152020 100170 144410 147590 135300 140060 225170 165810 155940 198440 161260 147690 223650 214880 199910 141750 99733 162440 149850 110370 146300 145940 141270 144600 220510 170240 161610 199100 169550 155190 222170 204840 190180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3058199999.9999995 9215 3494 8709 17546 14078 14078 1 9606 Homo sapiens 0.00929058575502495 FVDGVSTVAR Unmodified 1049.5506 0.55055881 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 6.5 0.5 1 1 46.865 46.951 2 2.8557E-09 12172 20230619_1887_Aki_TMTPro18x_K_F7 194.84 132.88 459620 329490 347580 451230 431700 502270 464790 458480 543930 511600 539370 538900 562400 488180 461690 563440 590750 568230 423810 302790 364350 446080 443230 502850 469050 472880 549450 515160 554500 544170 568650 509190 478920 565000 563820 539740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 278040000 9216 128 8710 17547;17548 14079;14080 14080 2 9606 Homo sapiens 0.027765549548803392 FVDHVFDEQVIDSLTVK Unmodified 1990.0048 0.004757612 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 5 0.816 1 1 1 63.108 63.141 3 0.00025559 19353 20230619_1885_Aki_TMTPro18x_K_F5 81.317 68.935 249300 222800 235820 228280 230380 231170 228020 242670 245280 146140 141300 123620 149020 117940 204750 154080 147080 121020 230550 204000 240480 230330 239520 233970 230660 244540 244510 152320 150260 126510 154430 123770 203750 152590 141100 115390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 531400000 9217 3384 8711 17549;17550;17551 14081 14081 1 9606 Homo sapiens 0.04935542349835487 FVDILGLR Unmodified 931.5491 0.54910224 814 A0A087WUB9;Q8WYA6;Q8WYA6-3;Q8WYA6-2;Q8WYA6-4 CTNNBL1 Beta-catenin-like protein 1 yes no 0 0 0 3 0 1 63.069 63.099 2 3.5366E-06 19702 20230619_1882_Aki_TMTPro18x_K_F3 154.35 79.04 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9218 814 8712 17552 14082 14082 1 9606 Homo sapiens 0.08058965656800865 FVDILTNWYVR Unmodified 1424.7452 0.74523587 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0 1 65.495 65.539 2 1.4452E-08 20374 20230619_1885_Aki_TMTPro18x_K_F5 205.09 178.71 61309 41848 56544 53203 40891 52557 50047 48525 69285 61349 57906 71998 66122 71352 76499 65758 69555 78798 56596 38435 57579 52800 44066 53088 50544 50218 69034 61679 60435 72516 67819 73273 77165 66947 66681 74670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40236000 9219 1736 8713 17553 14083 14083 1 9606 Homo sapiens 0.049853060399982496 FVDLYGAQK Unmodified 1039.5338 0.53384611 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 5.33 3.09 1 1 1 56.08 56.12 2;3 7.583E-06 16878 20230619_1880_Aki_TMTPro18x_K_F1 178.65 135.4 514580 462590 500290 558550 587640 668520 697780 687700 695020 692470 732760 767370 739940 667270 765390 807580 810340 902340 476000 424180 511230 557670 606390 668040 696970 701260 709750 701740 750830 772320 756470 698980 780600 814440 775530 855710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 466640000 9220 2908 8714 17554;17555;17556 14084;14085;14086 14084 3 9606 Homo sapiens 0.01566054068939593 FVDPSQDHALAK Unmodified 1326.6568 0.65681479 1289 P55196-5;A8MQ02;P55196;P55196-1;H0Y8U8;A0A804HJ20;A0A1P7ZIN0;G1UI22;J3KN01;P55196-2;P55196-6;P55196-3;Q5TIG5;H0Y7R8;Q96C95 MLLT4 Afadin yes no 0 0 0 6 0.816 1 1 1 46.49 46.573 3 0.015479 12362 20230619_1885_Aki_TMTPro18x_K_F5 50.222 39.368 32383 25635 30704 29915 27146 33318 32490 31461 41530 34696 43408 37576 41588 33274 33867 44996 46470 42246 29925 23510 31276 29915 28666 33387 32735 32360 41830 34997 44314 37917 42133 35088 35330 44840 44311 40170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120880000 9221 1289 8715 17557;17558;17559 14087 14087 1 9606 Homo sapiens 0.006552657295742392 FVEDTKK Unmodified 865.45453 0.45453316 1468 A0A384NL53;P16152 CBR1 Carbonyl reductase [NADPH] 1 yes no 0 0 1 6.5 0.5 1 1 41.964 42.047 3 0.061809 10126 20230619_1887_Aki_TMTPro18x_K_F7 58.716 26.588 65336 40407 85282 84128 106290 115210 87762 107490 99875 70576 110820 125270 92759 87901 114260 63665 112390 116380 60475 37373 85274 81699 108190 113870 90024 109310 101350 74976 112540 123340 96310 90618 115420 67492 107580 109970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205740000 9222 1468 8716 17560;17561 14088 14088 1 9606 Homo sapiens 0.0164240711480943 FVEECFQAGIISK Unmodified 1526.7439 0.74391524 2235 B4DKX4;B2R6E2;Q53EL6-2;Q53EL6 PDCD4 Programmed cell death protein 4 yes no 0 0 0 7.5 0.5 1 1 61.555 61.589 3 0.032965 18497 20230619_1887_Aki_TMTPro18x_K_F7 48.527 1.338 86446 75134 90772 91257 82002 92919 104930 88406 102510 103390 99821 75519 106750 83339 105120 94679 92037 106830 79999 68908 91735 90874 86456 93739 104370 91073 104480 102870 102710 78268 108570 86406 106150 95673 88289 101280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 531710000 9223 2235 8717 17562;17563 14089 14089 1 9606 Homo sapiens 0.00161303888967268 FVEGLPINDFSR Unmodified 1392.7038 0.70376498 3570 V9HWF2;P40925;P40925-3;A0A5K1VW95;P40925-2;B9A041;B8ZZ51 HEL-S-32;MDH1 Malate dehydrogenase;Malate dehydrogenase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 61.791 61.837 2 6.9134E-24 18924 20230619_1886_Aki_TMTPro18x_K_F6 257.92 221.52 1975100 1723800 1816200 2106700 1765100 2106000 2086300 2076100 2169000 2269400 2412700 2394800 2484900 2168900 2429700 2771000 2461600 2864100 1825900 1581000 1859400 2095900 1847500 2128700 2088100 2128700 2215200 2286800 2467500 2418900 2531400 2276500 2475600 2779000 2357700 2717900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2494700000 9224 3570 8718 17564;17565 14090;14091 14090 2 9606 Homo sapiens 0.02312125280695909 FVELPGAEMGK Oxidation (M) 1192.5798 0.57981002 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 1 0 5.5 0.5 1 1 54.851 54.923 2 0.070279 15947 20230619_1886_Aki_TMTPro18x_K_F6 56.632 40.059 41677 30134 34935 40930 32101 40196 39055 43247 43443 55315 50483 52129 56713 41088 48960 59137 54687 50489 38458 27689 36047 40430 33812 40754 39135 44279 44355 55122 51745 52684 57267 43724 50293 58623 52240 48062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52096000 9225 3402 8719 17566;17567 14092 14092 2017 1 9606 Homo sapiens -0.00877668811131116 FVELPGAEMGK Unmodified 1176.5849 0.5848954 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 7 0 1 59.285 59.334 3 3.5452E-05 17533 20230619_1887_Aki_TMTPro18x_K_F7 113.69 91.212 160840 125800 128770 155980 140850 182290 167120 141600 184050 206420 199340 236140 241540 187980 188310 252550 257480 275850 148440 115450 133870 155320 146350 181350 167440 149310 187320 206040 205860 236630 242600 199020 196600 253830 245810 261690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237160000 9226 3402 8719 17568 14093 14093 1 9606 Homo sapiens 0.003666350515004524 FVELVHQQK Unmodified 1126.6135 0.61349341 4259 Q8NI27;A0A0C4DG98;H0Y815;Q6P441 THOC2 THO complex subunit 2 yes no 0 0 0 1 0 1 47.404 47.404 3 0.015197 13320 20230619_1880_Aki_TMTPro18x_K_F1 66.621 49.185 23515 17760 20986 23989 25643 24989 25078 27594 34824 28913 26667 30029 27944 26603 28902 30453 29619 27021 21714 16315 21612 23725 26249 25257 25616 28037 34596 29193 27828 30305 28550 27738 29420 30350 28315 25710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63541000 9227 4259 8720 17569 14094 14094 1 9606 Homo sapiens 0.05525120742936451 FVEQQSYK Unmodified 1027.4975 0.4974606 2282 B2RA91;F8VXG7;Q99590-2;Q99590 SCAF11 Protein SCAF11 yes no 0 0 0 7 0 1 45.819 45.907 2 1.7251E-05 11688 20230619_1887_Aki_TMTPro18x_K_F7 149.94 96.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9228 2282 8721 17570 14095 14095 1 9606 Homo sapiens -0.01518822827756594 FVESVDEYQFVER Unmodified 1645.7624 0.76240208 325 A0A024R578;Q13405;E9PNF1;E9PI78 MRPL49 39S ribosomal protein L49, mitochondrial yes no 0 0 0 2.5 0.5 1 1 59.665 59.694 3 2.6455999999999997E-21 18272 20230619_1882_Aki_TMTPro18x_K_F3 222.94 209.26 19179 14676 16951 16856 17045 20041 21227 22997 22024 21412 21669 24362 22428 21275 24752 24663 22537 25464 17710 13459 17410 16897 17821 20089 21189 23236 22378 21807 22311 24490 22990 22215 25007 24777 21605 24167 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38908000 9229 325 8722 17571;17572 14096;14097 14097 2 9606 Homo sapiens -0.034648629355160665 FVETPGQK Unmodified 904.46543 0.46543219 2662 B5BUB5;P05455;E7ERC4;Q14730 SSB Lupus La protein yes no 0 0 0 6.5 0.5 1 1 45.171 45.259 2 3.0811E-09 11787 20230619_1886_Aki_TMTPro18x_K_F6 173.68 106.68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9230 2662 8723 17573;17574 14098;14099 14098 2 9606 Homo sapiens 0.00937809489096253 FVFDIFQFAK Unmodified 1260.6543 0.6542956 1244 A0A140VKC0;Q16222-2;Q16222-3;Q16222 UAP1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase yes no 0 0 0 5 0 1 66.608 66.651 3 0.04125 20842 20230619_1885_Aki_TMTPro18x_K_F5 38.567 24.05 5319.3 3056.8 4372.5 7462.1 3724.1 5771.3 4730.5 5093.2 5195.9 6028.6 7027.2 5529.3 4588.1 5351.7 5922.1 5844.7 6162.4 7450.3 4902.3 2836.6 4531 7137.1 3962.5 5936.7 4729.3 5279.4 5338.5 6026.6 7008.5 5634.7 4832.7 5549.5 6012.2 5955.2 5902.7 7054.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4276200 9231 1244 8724 17575 14100 14100 1 9606 Homo sapiens 0.034394620625789685 FVFDRPLPVSR Unmodified 1331.735 0.73500553 2961 F5GX11;V9HW55;P25786;P25786-2;B4E0X6;B4DEV8 PSMA1;HEL-S-275 Proteasome subunit alpha type-1;Proteasome subunit alpha type yes no 0 0 1 4.5 0.5 1 1 51.919 51.97 3 4.4757E-09 14586 20230619_1885_Aki_TMTPro18x_K_F5 181.66 132.16 217760 169520 192800 201400 192490 254650 215690 212320 613470 217470 196210 201990 273510 210770 213880 256870 238730 228800 201100 155510 198020 201470 201860 252390 227930 219950 584510 220120 224140 206130 273950 219650 220130 255710 228100 217650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 513190000 9232 2961 8725 17576;17577 14101;14102 14102 2 9606 Homo sapiens 0.08240743105443471 FVFGQNMSER Unmodified 1213.555 0.55499226 2698 Q9H6Z4;Q9H6Z4-2;Q9H6Z4-3;Q53GE1;B7Z7F3;B7Z5P4;A0A384ME25;K7ESQ0;K7EMH9 RANBP3 Ran-binding protein 3 yes no 0 0 0 8 0 1 52.16 52.237 2 0.011232 14494 20230619_1888_Aki_TMTPro18x_K_F8 101.54 92.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9233 2698 8726 17578 14103 14103 1 9606 Homo sapiens -0.04324303893849901 FVFGSESVK Unmodified 998.5073 0.50729701 3613 P49792;A0A8V8TLN4;A0A8V8TMN6;A6NKT7;J3KNE0;Q7Z3J3;B4DYH0;F8VYC4;A0A286YES2;P0DJD1;P0DJD0;B4DTT2;A0A8V8TMX6;B4E0M7;B4DTM4 RANBP2;RGPD3;RGPD4;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 1 yes no 0 0 0 8 0 1 55.542 55.604 2 0.0025713 15990 20230619_1888_Aki_TMTPro18x_K_F8 120.87 86.696 154490 142890 152570 159480 141050 188060 166250 159370 185450 189110 173970 167270 194190 151190 160410 205660 183820 190090 142960 130920 155060 160100 148370 187300 166780 165590 187480 188890 179850 170310 195880 159440 165250 204780 175690 180690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65632000 9234 3613 8727 17579 14104 14104 1 9606 Homo sapiens 0.007983651776271472 FVFHQEQVYCPDCAK Unmodified 1926.8393 0.83928896 3865 Q13642-4;Q13642-5;Q13642-1;Q53FI7;B7Z4B7;B7Z5V0;B7Z9A1;B7Z5T3;B7Z6U8;B3KRI9 FHL1 Four and a half LIM domains protein 1 yes no 0 0 0 7 0.816 1 1 1 50.921 50.999 3 1.8315E-05 14040 20230619_1887_Aki_TMTPro18x_K_F7 106.52 98.134 334950 288400 345250 351280 291800 277330 381210 268510 298180 321570 390440 274380 341380 243700 440050 304630 278280 284250 309900 264520 349060 348700 309030 286080 376570 276860 312050 320670 393610 280050 354060 255870 436070 304460 267860 270180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 341500000 9235 3865 8728 17580;17581;17582 14105;14106 14106 2 9606 Homo sapiens -0.08705710982258097 FVFSLVDAMNGK Oxidation (M) 1342.6591 0.65912298 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 1 0 2.33 0.471 2 1 62.02 62.037 3 0.0012308 18757 20230619_1881_Aki_TMTPro18x_K_F2 81.865 65.332 197530 156520 183680 208770 177850 185980 203200 206030 203410 220310 231340 228460 228620 204910 236970 257640 242700 254010 182510 143740 187790 206230 185780 190260 203510 209530 208410 222050 235970 230840 233870 214880 241260 257790 232230 241250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 331480000 9236 297 8729 17583;17584;17585 14107;14108 14107 183 2 9606 Homo sapiens 0.0014997814300841128 FVFSLVDAMNGK Unmodified 1326.6642 0.66420836 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 3.8 0.748 2 2 1 65.08 65.106 2;3 8.7306E-10 20433 20230619_1883_Aki_TMTPro18x_K_F4 219.03 172.57 113440 91922 106140 113540 86488 85578 117660 124470 84858 126640 130180 124860 129170 111870 147210 133820 123680 131140 104830 84340 108170 112580 92058 89588 115920 124540 90259 127650 131430 126430 132680 116980 148000 134030 118610 124560 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 112530000 9237 297 8729 17586;17587;17588;17589;17590 14109;14110;14111 14110 3 9606 Homo sapiens 0.013942820056172422 FVGGAENTAHPR Unmodified 1254.6105 0.6105333 3499 P24593;C9JXX4 IGFBP5 Insulin-like growth factor-binding protein 5 yes no 0 0 0 5 0.816 1 1 1 33.6 33.66 3 1.4001E-31 7049 20230619_1885_Aki_TMTPro18x_K_F5 248.21 213.05 121630 61446 135290 144720 179620 158970 153470 174810 149290 144460 191750 230970 185710 184160 174340 112230 239740 200870 112310 57021 136960 139360 181970 159970 156240 176660 154000 150180 194750 228680 189400 187650 180700 119150 228480 189990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 119840000 9238 3499 8730 17591;17592;17593 14112;14113 14112 2 9606 Homo sapiens -0.00658754381856852 FVGIKDEDQLEAFLK Unmodified 1750.9142 0.91415169 1295 M0QXH0;B4DX69;A0A1S5UZH5;Q99757 TXN2 Thioredoxin, mitochondrial yes no 0 0 1 7 0 1 62.632 62.668 4 3.5313E-07 19024 20230619_1887_Aki_TMTPro18x_K_F7 123.38 100.58 89646 93451 93853 107880 91667 116320 119710 110290 133730 118920 111990 122930 140530 103240 132140 152670 112910 142580 83067 85614 95082 107880 96243 116820 119460 113360 134570 119870 117280 123980 142000 109810 133580 151990 108420 135420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193860000 9239 1295 8731 17594 14114 14114 1 9606 Homo sapiens 0.06873118092221375 FVGPGGYNLK Unmodified 1050.5498 0.54983053 4270 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 3 0 1 54.232 54.279 3 3.9354E-07 16067 20230619_1882_Aki_TMTPro18x_K_F3 144.12 106.4 67953 61562 76975 88495 68636 85388 83722 81960 71137 101850 95825 97994 114050 89272 91795 124890 106400 116440 62945 56554 77404 87076 72358 86458 83201 84523 74324 101680 97966 99395 114710 94289 94729 124350 101740 110650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127080000 9240 4270 8732 17595 14115 14115 1 9606 Homo sapiens 0.026577603058285604 FVGQDVEGER Unmodified 1134.5306 0.53055165 3468 P17812;A0A3B3IRI2;B4E1E0;P17812-2 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 2 0.816 1 1 1 42.399 42.446 2 3.2464E-05 10972 20230619_1881_Aki_TMTPro18x_K_F2 154.01 134.41 130040 90867 124120 127810 103990 135600 130570 120470 141450 169500 174980 189540 184310 163130 156630 197180 202570 192450 120090 83539 126320 126110 110490 136110 130500 125480 144940 169250 178440 190560 186570 170890 162510 197220 193300 182880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 383740000 9241 3468 8733 17596;17597;17598 14116 14116 1 9606 Homo sapiens -0.031332407757190595 FVHGEGLR Unmodified 913.477 0.47699993 2187 B1AH87;Q13850;P30536;Q8N730 TSPO;PBR Translocator protein yes no 0 0 0 6.5 0.5 1 1 35.897 35.963 3 4.4899E-05 7933 20230619_1886_Aki_TMTPro18x_K_F6 172.14 89.882 404400 296260 432990 452160 630190 636370 635550 621760 706160 554810 589070 686610 700160 602390 641290 656170 716550 667780 373920 272580 440620 446050 638540 629050 642350 634270 710490 568580 615530 688030 708440 626870 657330 659240 684520 634320 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1528699999.9999998 9242 2187 8734 17599;17600 14117;14118;14119;14120 14117 4 9606 Homo sapiens 0.01680051303083019 FVIATSTK Unmodified 865.49092 0.49091866 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 RPL6 60S ribosomal protein L6 yes no 0 0 0 2.5 0.5 1 1 50.754 50.815 2 0.00038927 14452 20230619_1882_Aki_TMTPro18x_K_F3 165.11 144.63 816920 639000 702840 730170 842910 889010 865820 847020 909870 701480 645320 540320 736560 553690 720770 776300 751970 554040 754300 585930 725710 732190 864940 886140 872790 864180 913670 712280 678060 557130 747780 582630 735150 764020 717810 529310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3044499999.9999995 9243 680 8735 17601;17602 14121 14121 1 9606 Homo sapiens 0.05279284011521668 FVIEENLHCIIK Unmodified 1513.7963 0.79628516 133 A0A024R179;Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes no 0 0 0 7.5 0.5 1 1 58.951 58.996 3 4.2871E-07 17406 20230619_1888_Aki_TMTPro18x_K_F8 154.09 114.43 406660 351850 387480 431090 373180 425820 451870 444420 456020 530920 470980 482110 545060 451860 467720 586210 478470 569470 376020 322720 395300 428810 390920 431430 451250 455070 465480 530280 485860 490650 550150 474320 478260 585620 458320 540730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76035000 9244 133 8736 17603;17604 14122;14123 14123 2 9606 Homo sapiens 0.05993887022577837 FVIGGPQGDAGLTGR Unmodified 1443.747 0.74702678 1192 A0A140VJP5;P31153;B4DEX8;P31153-2 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase yes no 0 0 0 5.33 3.09 1 1 1 54.179 54.224 2 4.3703E-33 16085 20230619_1880_Aki_TMTPro18x_K_F1 259.75 194.5 479560 406040 468650 464080 418110 527870 456420 439980 511700 621260 554460 538390 620980 497730 487560 688060 595930 607100 443450 372210 476230 464840 439930 526920 459910 460410 520600 615560 569530 549050 625190 524940 505230 683230 569210 577450 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 940540000 9245 1192 8737 17605;17606;17607 14124;14125;14126 14124 3 9606 Homo sapiens 0.04290315057983207 FVIGHLK Unmodified 812.49086 0.49085908 3363 O95864-3;O95864;O95864-4;O95864-2;E5RGZ5;E5RGD8 FADS2 Fatty acid desaturase 2 yes no 0 0 0 4 0 1 48.949 48.987 3 0.0029335 13509 20230619_1883_Aki_TMTPro18x_K_F4 118.06 40.308 340940 270400 307690 328400 150250 184410 257000 246160 273280 417770 311120 228910 454520 312050 197640 670680 271670 289080 314950 248080 313050 325130 171600 198910 253700 251930 279820 407080 322790 244740 446660 338000 212270 645360 259340 278550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 264160000 9246 3363 8738 17608 14127 14127 1 9606 Homo sapiens 0.07711328802179196 FVIHCNSPVWGADK Unmodified 1628.7769 0.7769467 3298 O75367;O75367-3;O75367-1;A0A8I5KRC6;B4DJC3;A0A8I5KS04;Q59FH0 H2AFY Core histone macro-H2A.1;Histone H2A yes no 0 0 0 2 0 1 53 53.033 3 3.2712E-09 15755 20230619_1881_Aki_TMTPro18x_K_F2 164.93 137.98 137500 112550 113720 133150 96091 170990 123230 145400 184390 115230 80179 91056 134590 110410 76385 163960 166170 166320 126960 103220 117430 133240 102630 169260 124550 149410 180110 117530 89548 94313 133020 116150 84129 163730 158120 157940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113700000 9247 3298 8739 17609 14128 14128 1 9606 Homo sapiens -0.012290692683336601 FVIHCNSPVWGADKCEELLEK Unmodified 2530.1985 0.19846517 3298 O75367;O75367-3;O75367-1;A0A8I5KRC6;B4DJC3;A0A8I5KS04;Q59FH0 H2AFY Core histone macro-H2A.1;Histone H2A yes no 0 0 1 7.5 0.5 1 1 57.777 57.829 4 1.6691E-11 16962 20230619_1888_Aki_TMTPro18x_K_F8 138.04 125.11 126490 124340 145290 139220 114720 129540 136150 143740 108690 150510 125910 105430 128750 103430 122320 115050 111940 107690 117260 113900 145530 139340 122040 132090 135330 146020 113200 150250 128400 109010 130930 107440 123880 115060 107180 102380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 538190000 9248 3298 8740 17610;17611 14129;14130 14130 2 9606 Homo sapiens -0.0054261226782728045 FVINYDYPNSSEDYIHR Unmodified 2130.9647 0.96468371 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 5.5 0.5 1 1 55.822 55.892 3 5.7534E-30 16371 20230619_1886_Aki_TMTPro18x_K_F6 222.88 217.78 582720 497230 488380 577010 494180 554920 537260 541890 581180 629470 667230 631020 663490 597450 611150 736110 710540 735760 538250 455850 504560 575900 514320 562650 540780 556960 593250 631460 680120 639720 675080 624610 628580 737100 679060 698740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 929130000 9249 3137 8741 17612;17613 14131;14132 14132 2 9606 Homo sapiens -0.055560043207151466 FVINYDYPNSSEDYVHR Unmodified 2116.949 0.94903365 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 5 0.632 1 3 1 54.262 54.335 3 5.241E-30 15726 20230619_1886_Aki_TMTPro18x_K_F6 224.67 208.27 70346 62278 67086 65858 59999 70693 68893 73398 69515 88061 86077 98602 88307 80445 75105 96878 92049 114300 65055 57041 68307 66327 63152 71199 69022 75175 71533 88474 87711 98954 89472 84449 77669 97991 88062 108300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 998080000 9250 1328 8742 17614;17615;17616;17617;17618 14133;14134;14135;14136;14137 14136 5 9606 Homo sapiens -0.06476290837781562 FVLCPECENPETDLHVNPK Unmodified 2297.0457 0.045652924 406 A0A024R6Q1;P55010;Q6IBU0;H0YLZ1;Q32Q19;Q05DF3;H0YN40 EIF5 Eukaryotic translation initiation factor 5 yes no 0 0 0 4.5 0.5 1 1 56.018 56.054 3 1.8702E-09 16271 20230619_1885_Aki_TMTPro18x_K_F5 121.27 107.67 61111 53707 62986 65357 52429 73428 73700 67314 78508 76454 71369 85489 87227 77720 86580 96695 92467 114130 56548 49256 63713 65155 55972 73460 73215 69459 79442 77067 74380 86093 88529 81442 88439 97798 88565 108130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 343870000 9251 406 8743 17619;17620 14138;14139 14139 2 9606 Homo sapiens -0.05098807664489868 FVLHAVQLVK Unmodified 1152.7019 0.70191449 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 5.5 0.5 1 1 57.286 57.351 3 3.3074E-07 16990 20230619_1886_Aki_TMTPro18x_K_F6 145.17 115.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9252 1552 8744 17621;17622 14140;14141 14141 2 9606 Homo sapiens 0.13167161053388554 FVLQDGAHHMVDSNEISFIR Oxidation (M) 2330.1114 0.11136472 2867;2868 E5KND5;Q96RP9;Q96RP9-2;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 1 0 6 0 1 52.3 52.377 4 1.6547E-54 14952 20230619_1886_Aki_TMTPro18x_K_F6 269.9 256.03 29195 25934 27355 34097 28117 30924 29088 35098 35940 36016 31852 32770 34563 26675 36437 35069 26313 35604 26996 23802 27990 33715 29185 31604 29503 35580 36085 36238 33007 33201 35247 28180 36457 35140 25339 33777 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129640000 9253 2867;2868 8745 17623 14142 14142 1703 1 9606 Homo sapiens -0.0004865042724304658 FVLSGANIMCPGLTSPGAK Oxidation (M) 1934.9594 0.9594041 4682 Q9ULC4;Q9ULC4-3;Q9ULC4-2;A0A3B3IRV3 MCTS1 Malignant T-cell-amplified sequence 1 yes no 0 1 0 4 0 2 60.797 60.799 3;4 4.9092E-08 18657 20230619_1883_Aki_TMTPro18x_K_F4 118.05 101.36 135600 120090 135160 154810 145380 153650 140200 147680 159680 158410 163070 147370 160030 134220 163150 169530 162370 183300 125450 110200 137590 153440 150020 155340 142330 151580 161750 159190 166940 149750 163550 140810 165850 170530 155510 173880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 115620000 9254 4682 8746 17624;17625 14143;14144;14145 14144 2854 3 9606 Homo sapiens 0.029322772914383677 FVLSQAK Unmodified 791.45414 0.45413923 4089 Q86UY0;Q6EHZ3;Q658S9;Q8NBS9;A0A024QZV0;Q8NBS9-2 TXNDC5;STRF8;DKFZp666I134;hCG_1811539 Thioredoxin domain-containing protein 5 yes no 0 0 0 3 0 1 50.3 50.375 2 0.0050265 14287 20230619_1882_Aki_TMTPro18x_K_F3 114.78 52.069 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9255 4089 8747 17626 14146 14146 1 9606 Homo sapiens 0.050070321856082955 FVLSSGK Unmodified 736.41194 0.41194006 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;B4DHR1;K7EJB9 CALR;HEL-S-99n Calreticulin yes no 0 0 0 3 0.816 1 1 1 49.89 49.946 2 0.0062973 14104 20230619_1882_Aki_TMTPro18x_K_F3 134.12 47.287 7344200 5578900 6114100 6628200 8164600 9696600 8079400 8024000 12107000 3748600 3570300 3791800 3651000 3186400 5693800 3976300 4724200 3222800 6778500 5118100 6348600 6646700 8332400 9530700 8266100 8197400 11738000 4037200 4073900 3830400 3825500 3346800 5690100 3947200 4519000 3074500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2108199999.9999998 9256 1691 8748 17627;17628;17629 14147;14148 14148 2 9606 Homo sapiens 0.03319056777240803 FVLVHPDVK Unmodified 1052.6019 0.6018661 4045 Q8IXG0;Q69YP1;Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 crn;DKFZp762M013;CRNKL1 Crooked neck-like protein 1 yes no 0 0 0 1.5 0.5 1 1 50.58 50.606 3 0.00017488 14629 20230619_1880_Aki_TMTPro18x_K_F1 129.38 95.305 74272 67638 74173 82943 79765 96244 91953 88927 96915 94238 87279 85757 105390 95787 89456 110210 101560 99629 68725 62028 75514 82671 82789 96124 92148 91494 98110 94732 90789 87826 106290 99208 92026 109880 97038 94748 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95018000 9257 4045 8749 17630;17631 14149 14149 1 9606 Homo sapiens 0.07766923719600527 FVMKPPQVVR Unmodified 1199.6849 0.68488422 2657 Q6IBR8;B5BU01;P20042;Q96I16 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 1 6.5 0.5 1 1 49.315 49.396 3 0.04698 13672 20230619_1886_Aki_TMTPro18x_K_F6 52.79 19.669 216970 196970 223530 227480 184440 246010 237940 228900 253940 196200 189740 155470 182870 155710 217410 220970 212400 139080 200810 180540 226020 227520 196400 246890 237310 234190 255040 198930 197270 159940 188540 163960 220190 216450 202760 133230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 339150000 9258 2657 8750 17632;17633 14150 14150 1 9606 Homo sapiens 0.09302917175955372 FVMQEEFSR Oxidation (M) 1187.5281 0.52810881 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DDM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 1 0 3.5 0.5 1 1 46.083 46.144 2 0.0017554 12363 20230619_1882_Aki_TMTPro18x_K_F3 107.69 92.031 306250 252260 268100 279740 349870 317060 317470 313090 355170 338670 404180 394140 381180 328790 379490 430620 414160 457310 282900 231200 276720 280850 355640 317970 323180 320830 361600 342590 411340 395620 389720 346690 388140 432410 396230 433910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 648490000 9259 2389 8751 17634;17635 14151;14152 14151 1471 2 9606 Homo sapiens -0.058154125050123184 FVMQEEFSR Unmodified 1171.5332 0.53319418 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DDM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 4.5 0.5 1 1 53.157 53.203 2 2.2344E-05 15444 20230619_1883_Aki_TMTPro18x_K_F4 168.26 146.17 1702000 1422500 1471100 1477300 1377400 1617100 1690400 1641000 1690200 2227700 2084100 2339500 2268900 1836300 2132800 2456000 2492300 2790200 1572300 1302900 1512400 1490300 1447500 1625700 1686700 1690400 1740300 2221900 2129900 2351800 2302900 1944600 2192800 2475500 2383200 2645500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1643499999.9999998 9260 2389 8751 17636;17637 14153;14154 14153 2 9606 Homo sapiens -0.045711086424034875 FVMSPNK Oxidation (M) 837.40547 0.40547447 4797 yes no 0 1 0 2 0 1 56.787 56.803 3 0.035035 17317 20230619_1881_Aki_TMTPro18x_K_F2 60.358 26.106 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9261 4797 8752 17638 14155 14155 2915 1 9606 Homo sapiens -0.01973204445778265 FVNDYDK Unmodified 899.4025 0.40249759 3884 Q14257;Q14257-2;A8MXP8 RCN2 Reticulocalbin-2 yes no 0 0 0 4 0 1 47.288 47.33 2 0.043403 12759 20230619_1883_Aki_TMTPro18x_K_F4 80.438 47.318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9262 3884 8753 17639 14156 14156 1 9606 Homo sapiens -0.051227562989538455 FVNLGIEPPK Unmodified 1112.623 0.62299547 1235 C9JX88;A0A140VK70;P35998;Q75L23;P35998-2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 3.67 3.09 1 1 1 59.899 59.915 3 0.0015655 18463 20230619_1880_Aki_TMTPro18x_K_F1 89.047 64.125 97748 69831 87731 101840 82818 103320 103220 82197 120520 118800 115620 118270 126900 101700 109840 134540 117900 130170 90237 64220 89986 100160 87094 103830 103370 86505 121630 118130 119360 119520 128310 107220 112580 134360 112820 123640 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 172290000 9263 1235 8754 17640;17641;17642 14157;14158;14159 14157 3 9606 Homo sapiens 0.07118889028470221 FVNVVPTFGK Unmodified 1106.6124 0.61243078 2944 E9PR30;P62861 FAU 40S ribosomal protein S30 yes no 0 0 0 4.5 0.5 1 1 61.62 61.646 3 0.0021953 18620 20230619_1885_Aki_TMTPro18x_K_F5 83.883 78.604 1128600 1014300 1021100 1063000 832600 1133800 1239800 1169100 1128700 855240 732660 700930 1137000 747360 809100 1157200 924910 844370 1043400 928900 1044000 1071100 892040 1141800 1222700 1183700 1139900 876870 787880 721440 1130800 791760 836780 1137700 883270 805590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1860399999.9999998 9264 2944 8755 17643;17644 14160;14161 14161 2 9606 Homo sapiens 0.0633890637402601 FVNWQVDGEYR Unmodified 1411.6521 0.65206377 3367 O96008;O96008-2;K7EKG4;K7EJ57 TOMM40 Mitochondrial import receptor subunit TOM40 homolog yes no 0 0 0 5.5 0.5 1 1 56.89 56.957 2 1.0008999999999999E-22 16861 20230619_1886_Aki_TMTPro18x_K_F6 244.28 226.42 145840 128880 154640 162210 152510 174200 176460 179720 182060 201070 188800 191060 227280 185890 194250 210130 200190 207180 134990 118240 156390 161250 159210 175350 176760 183770 185590 201720 195100 194230 229100 193250 198520 210580 191540 196790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 170650000 9265 3367 8756 17645;17646 14162;14163 14163 2 9606 Homo sapiens -0.037296184131946575 FVPAEMGTHTVSVK Unmodified 1501.7599 0.75989966 3484 P21333;P21333-2;Q60FE5;Q60FE6;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91;H0Y5C6 FLNA;FLJ00119 Filamin-A yes no 0 0 0 1 0 1 49.763 49.763 3 1.0426E-16 14276 20230619_1880_Aki_TMTPro18x_K_F1 210.14 181.86 88104 60265 67823 77886 85802 105790 93274 98649 128830 104270 112490 143590 123190 129600 95402 147450 171230 215740 81229 55359 70938 77554 88104 104650 94678 101400 128510 106350 116820 143470 124350 135070 101980 151510 163400 204020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109480000 9266 3484 8757 17647 14164 14164 1 9606 Homo sapiens 0.02909010125858913 FVPAEMGTHTVSVK Oxidation (M) 1517.7548 0.75481428 3484 P21333;P21333-2;Q60FE5;Q60FE6;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91;H0Y5C6 FLNA;FLJ00119 Filamin-A yes no 0 1 0 8 0 1 44.857 44.885 3 0.0045817 11439 20230619_1888_Aki_TMTPro18x_K_F8 64.224 52.642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9267 3484 8757 17648 14165 14165 2140 1 9606 Homo sapiens 0.016647062632273446 FVPAENDSILMNPAQDGEVQLSQNDDK Unmodified 2973.3662 0.36619502 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B7Z3E7;A8KA50;C9JXV0 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 3 0 1 62.242 62.271 4 0.0020671 19319 20230619_1882_Aki_TMTPro18x_K_F3 68.895 61.273 21941 15759 20468 19737 19770 18664 21992 21260 24025 19079 23118 21188 24567 20722 22932 25280 32882 25398 20262 14468 20895 19601 20628 19023 22112 21488 24304 19471 23814 21423 24962 21632 23906 25331 31313 24149 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9428200 9268 1984 8758 17649 14166 14166 1 9606 Homo sapiens -0.04155343050888405 FVPAGYESALQVR Unmodified 1435.746 0.74596415 3856 Q13535-2;Q13535-3;Q13535 ATR Serine/threonine-protein kinase ATR yes no 0 0 0 1 0 1 57.275 57.275 3 0.07486 17378 20230619_1880_Aki_TMTPro18x_K_F1 49.333 28.633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9269 3856 8759 17650 14167 14167 1 9606 Homo sapiens 0.045521006890794524 FVPDECPR Unmodified 1018.4542 0.45421558 906 B7Z1U8;B3KQQ0;A0A090N8P3;O95302;O95302-3 FKBP9 Peptidyl-prolyl cis-trans isomerase FKBP9 yes no 0 0 0 2.5 0.5 1 1 43.063 43.137 2 0.002252 10976 20230619_1882_Aki_TMTPro18x_K_F3 129.68 58.77 88832 62247 76653 76262 96957 117410 98908 92042 111420 96964 114520 120190 109940 95793 112360 111310 125160 124800 81974 57142 79204 76392 99278 114980 99974 95910 112860 98481 117200 120130 112490 100430 114920 112370 119630 118390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104150000 9270 906 8760 17651;17652 14168 14168 1 9606 Homo sapiens -0.054273358766863566 FVPEGFK Unmodified 822.42759 0.42759012 1293 A0A1S5UZH2;Q8TDZ2;Q8TDZ2-4;Q8TDZ2-2;Q5TED7 MICAL1 Protein-methionine sulfoxide oxidase MICAL1 yes no 0 0 0 8 0 1 54.981 55.048 2 0.037414 15731 20230619_1888_Aki_TMTPro18x_K_F8 91.906 51.803 153000 135300 153610 158240 181870 206050 172080 166220 185860 185420 202740 194640 212380 185400 199180 206480 206990 214310 141550 124030 156450 158540 186450 203820 174530 173080 189300 186700 207610 196920 215840 192650 203240 207590 198020 203450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45179000 9271 1293 8761 17653 14169 14169 1 9606 Homo sapiens 0.009273432942904947 FVPLLPGNR Unmodified 1011.5866 0.58655038 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5 0 1 57.002 57.064 2 0.00060016 16684 20230619_1885_Aki_TMTPro18x_K_F5 130.05 130.05 350100 296130 301880 330210 279530 347820 353050 357530 385420 312910 286130 267440 308020 237790 321280 326070 309320 299980 323430 271400 310570 331030 294520 350570 352690 363370 386700 317330 299190 272730 314170 251060 325830 324790 296010 285230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 671380000 9272 3758 8762 17654 14170 14170 1 9606 Homo sapiens 0.08122056922422871 FVPPALEK Unmodified 899.51165 0.5116541 2564 B4DP80;Q8NCW5;Q8NCW5-2;A0A7P0TAG8 APOA1BP NAD(P)H-hydrate epimerase yes no 0 0 0 4.5 3.5 1 1 55.78 55.811 2;3 0.0094319 16805 20230619_1880_Aki_TMTPro18x_K_F1 69.825 44.266 139520 122160 138900 148260 143930 173400 167800 160760 181210 189700 183430 199580 196140 170460 165880 219630 204490 226260 129060 112030 141320 147920 149850 173110 168210 165890 184030 190460 188750 201150 198410 179390 171650 220110 195440 214760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143420000 9273 2564 8763 17655;17656 14171;14172 14171 2 9606 Homo sapiens 0.057878743911942365 FVPYYDLFMPSLK Unmodified 1618.8105 0.81053824 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6 IPO5;RANBP5 Importin-5 yes no 0 0 0 4.5 0.5 1 1 65.805 65.833 3 0.0012781 20511 20230619_1885_Aki_TMTPro18x_K_F5 81.709 0 22718 18676 23288 21781 16393 23455 22739 21862 22867 25987 27688 27348 30722 21590 27095 31689 28709 33685 21012 17125 23503 21773 17780 23545 22578 22559 23491 26074 28312 27518 31052 23020 27732 31775 27488 31955 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73393000 9274 782 8764 17657;17658 14173 14173 1 9606 Homo sapiens 0.025885394508350146 FVQAVIPTIEYDYTR Unmodified 1813.9251 0.92505073 4591 Q9NT62 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 0 0 0 8 0 1 63.324 63.346 3 0.0068048 19252 20230619_1888_Aki_TMTPro18x_K_F8 67.605 64.217 38357 34533 39488 44502 43713 39231 46111 48637 41899 59560 64317 65470 77954 58901 65667 70780 63942 78199 35499 31687 40103 44060 45038 40312 46256 49328 43901 59736 65540 65983 78470 61649 66928 71335 61295 74143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148400000 9275 4591 8765 17659 14174 14174 1 9606 Homo sapiens 0.050645204665215715 FVQCPDGELQK Unmodified 1319.618 0.61798644 4699 Q9Y230;B3KNL2;Q9Y230-2;M0R0Y3 RUVBL2 RuvB-like 2 yes no 0 0 0 5 0.816 1 1 1 50.121 50.183 3 0.00034016 13822 20230619_1885_Aki_TMTPro18x_K_F5 99.215 84.529 483410 412160 471670 513430 462720 582880 580330 584800 574810 566300 620530 727290 678050 542760 681940 685360 651590 725060 447020 378130 480400 511110 484920 583950 578240 596850 587700 578000 637970 724570 690070 573570 691740 688670 624230 687980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1001899999.9999999 9276 4699 8766 17660;17661;17662 14175 14175 1 9606 Homo sapiens -0.029037828964646906 FVQDTLK Unmodified 849.45962 0.45961853 839 A0A087WWM0;O43617-2;O43617;A0A087WYS5 TRAPPC3 Trafficking protein particle complex subunit 3 yes no 0 0 0 7 0 1 50.322 50.404 2 0.042304 13785 20230619_1887_Aki_TMTPro18x_K_F7 94.114 42.327 160810 126770 159610 176920 175140 225270 185620 188690 270510 184370 196570 183890 199100 157130 171160 243490 246720 179900 148650 116480 162620 175090 181380 223140 189110 195150 267540 186770 205130 186010 201850 167480 179090 239520 234860 171790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83775000 9277 839 8767 17663 14176 14176 1 9606 Homo sapiens 0.028867109774409982 FVQETELSQR Unmodified 1235.6146 0.61461563 972 A0A0A6YYG7;Q6IBW4-2;Q6IBW4;Q6IBW4-4;H0YC55 NCAPH2 Condensin-2 complex subunit H2 yes no 0 0 0 3.5 0.5 1 1 45.773 45.833 2 0.0019033 12226 20230619_1882_Aki_TMTPro18x_K_F3 114.89 81.155 103240 90642 100510 97950 100400 102430 110160 101480 117180 127150 136720 102310 124850 85509 105070 105380 99930 72307 95490 83037 102300 98438 104490 103290 110740 104430 119790 126350 138570 104490 126670 89874 106900 103760 95471 69129 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31368000 9278 972 8768 17664;17665 14177 14177 1 9606 Homo sapiens 0.006232903211866869 FVQLEGAHPLEK Unmodified 1366.7245 0.72450043 4451 Q9BVI4;F5H303 NOC4L Nucleolar complex protein 4 homolog yes no 0 0 0 6 0 1 51.23 51.307 3 0.0001652 14469 20230619_1886_Aki_TMTPro18x_K_F6 102.52 72.711 152380 130130 151720 160000 142250 172560 166660 155430 188540 193350 187140 186010 206400 169440 173070 214800 194890 212430 140930 119370 154110 159290 149290 173130 167310 161030 190860 193170 192880 188630 208430 177770 178020 214870 186380 201730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206000000 9279 4451 8769 17666 14178 14178 1 9606 Homo sapiens 0.05580715660357782 FVSEDDRNSFTLK Unmodified 1556.7471 0.74708636 3544 P34932;B4DH02;Q59GF8;B4DUS3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8;B0AZS1 HSPA4 Heat shock 70 kDa protein 4 yes no 0 0 1 6 0.816 1 1 1 51.672 51.747 3 3.4429E-06 14648 20230619_1886_Aki_TMTPro18x_K_F6 135.91 121.98 969760 817990 836410 933430 846000 994360 903100 955140 990070 1222800 1162400 1099900 1299100 1067900 1005200 1355900 1179000 1133700 895870 749840 861490 934130 880390 1000100 910460 985400 1012000 1217300 1189800 1121500 1307300 1117800 1038900 1344500 1126100 1079300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2096899999.9999998 9280 3544 8770 17667;17668;17669 14179;14180 14179 2 9606 Homo sapiens -0.009017297326863627 FVSFLGR Unmodified 824.45447 0.45447358 1653 A0A7I2V351;A0A7I2V487;Q7Z726;A8K7D9;A0A7I2YQE1;P52292;A0A7I2V3Z3;J3QLL0;J3KS65 KPNA2 Importin subunit alpha;Importin subunit alpha-1 yes no 0 0 0 5.5 0.5 1 1 58.513 58.574 2 0.009912 17308 20230619_1885_Aki_TMTPro18x_K_F5 118.69 74.076 566790 500460 528700 556030 402870 602960 523370 553290 684000 508250 398090 293160 467330 331430 387710 547420 422540 342250 524070 458570 538680 557740 433280 604730 525740 567330 676020 510000 424140 309360 470720 352230 398440 534670 403390 327540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 357330000 9281 1653 8771 17670;17671 14181;14182 14181 2 9606 Homo sapiens 0.035224519054850134 FVSFPTQVLAK Unmodified 1235.6914 0.69140938 2428 B3KVY9;Q8TB61-3;Q8TB61-2;Q8TB61;Q8TB61-5;Q8TB61-4 SLC35B2 Adenosine 3'-phospho 5'-phosphosulfate transporter 1 yes no 0 0 0 4.5 0.5 1 1 62.384 62.41 3 0.047086 19023 20230619_1885_Aki_TMTPro18x_K_F5 46.352 14.98 84330 59547 89910 91110 75383 91410 88807 106020 117040 91107 87822 94412 94128 83013 111970 104570 106050 104570 77954 54797 90664 89415 79905 92677 89691 106850 116410 92997 91851 95326 96752 87133 113180 104760 101510 99327 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90802000 9282 2428 8772 17672;17673 14183 14183 1 9606 Homo sapiens 0.08299133608329612 FVSGEEIVSASTDSQLK Unmodified 1795.884 0.88397377 2344 B3KM72;X5D9B8;H0Y339;X5D2S9;X5DNY7;X5D7N8;X5DR91;Q8NHY2-3;Q8NHY2-2;Q8NHY2-4;Q8NHY2 RFWD2 E3 ubiquitin-protein ligase RFWD2 yes no 0 0 0 5 0 1 59.165 59.219 3 0.0018832 17574 20230619_1885_Aki_TMTPro18x_K_F5 70.41 52.904 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9283 2344 8773 17674 14184 14184 1 9606 Homo sapiens 0.01786714636364195 FVSISDLLVPK Unmodified 1216.7067 0.7067251 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q8TB95;B3KVE3 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 0 3.5 0.5 1 1 64.322 64.342 3 1.8269E-06 20156 20230619_1883_Aki_TMTPro18x_K_F4 155.42 114.14 588440 502340 570950 600950 497870 639550 569320 503850 589570 741270 694200 667620 702830 603020 658670 795510 638620 747380 544130 460670 580590 599250 525540 640600 570720 530730 604430 734090 707570 678960 714850 634350 670280 793210 611970 709980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 945900000 9284 2533 8774 17675;17676 14185;14186;14187 14186 3 9606 Homo sapiens 0.10704000405507941 FVTDIDELGK Unmodified 1135.5761 0.57610486 3773 Q00534 CDK6 Cyclin-dependent kinase 6 yes yes 0 0 0 4.33 0.471 2 1 60.95 60.976 2;3 6.3307E-07 18728 20230619_1883_Aki_TMTPro18x_K_F4 169.44 126.57 69016 52433 65791 75720 57436 64029 60063 58776 67646 87664 67629 79093 92347 78191 64465 99839 83927 101690 63764 48202 67023 74366 60412 65507 60679 61216 68648 86769 70525 80612 92157 81852 67318 99969 80236 96497 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 389770000 9285 3773 8775 17677;17678;17679 14188;14189 14188 2 9606 Homo sapiens 0.01373984686665608 FVTSNTQELGK Unmodified 1222.6194 0.61936665 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1;Q7Z4Y3 SRRT Serrate RNA effector molecule homolog yes no 0 0 0 7 0 1 49.245 49.329 3 2.4993E-06 13295 20230619_1887_Aki_TMTPro18x_K_F7 150.04 105.18 181790 149510 136050 177470 156640 182400 171960 165720 224700 196080 203810 200310 212990 187540 207070 241860 214760 246870 167750 137120 142580 176940 161770 183700 174070 171320 225020 196770 210480 202820 216870 196740 211300 242340 205630 234310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 611690000 9286 4464 8776 17680 14190 14190 1 9606 Homo sapiens 0.01696174463927491 FVTVQTISGTGALR Unmodified 1448.7987 0.798728 415 B3KUZ8;A0A024R6W0;P00505;P00505-2 GOT2 Aspartate aminotransferase;Aspartate aminotransferase, mitochondrial yes no 0 0 0 4.67 0.471 1 2 56.377 56.421 2;3 1.3548E-16 16830 20230619_1883_Aki_TMTPro18x_K_F4 156.02 128.69 124810 96948 127230 141540 118510 135920 140750 128690 215780 142520 132430 134810 155120 134020 130540 157510 150920 144590 115390 89129 129010 139140 124550 137650 142850 132410 212050 143270 140770 137200 156500 139500 134440 157120 144160 137490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 495750000 9287 415 8777 17681;17682;17683 14191;14192 14191 2 9606 Homo sapiens 0.09228058751909884 FVVDLSDQVAPTDIEEGMR Unmodified 2120.0096 0.0095849934 1235 C9JX88;A0A140VK70;P35998;Q75L23;B7Z571 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 3 0 1 63.115 63.145 3 0.00011002 19740 20230619_1882_Aki_TMTPro18x_K_F3 79.511 74.082 18760 14234 18576 17549 14736 18134 23638 20252 26614 19772 23610 19946 22288 17826 22590 25859 22857 22252 17338 13063 18829 17467 15862 18336 23398 20539 26785 20026 24287 20201 22797 18882 22999 25645 21862 21175 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19279000 9288 1235 8778 17684 14193 14193 1 9606 Homo sapiens -0.005619415696855867 FVVDVDK Unmodified 820.43307 0.43306943 1202 P62195;A0A140VJS3;P62195-2;Q59GS3;J3QSA9;J3KRP2;J3QRR3;J3QLH6;J3QRW1;A0A994J6H0 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 4 0.816 1 1 1 53.615 53.662 2 0.012714 15658 20230619_1883_Aki_TMTPro18x_K_F4 119.21 84.111 595370 462040 520340 615950 578760 680720 646180 616370 743440 712080 781340 807830 816730 644430 650780 892710 859350 843110 549770 424340 536370 609990 598950 681770 650550 636870 753310 717490 801400 810430 824400 683330 677530 889560 820090 801380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 503630000 9289 1202 8779 17685;17686;17687 14194;14195 14194 2 9606 Homo sapiens 0.01567022086101133 FVVGSHVR Unmodified 899.49774 0.49773538 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5;Q9BWF4 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 2.5 0.5 1 1 36.089 36.145 3 0.00018374 8015 20230619_1882_Aki_TMTPro18x_K_F3 159.2 142.42 201040 168200 188170 165710 199330 255510 190620 185320 265200 54067 55416 49004 50595 42136 107170 51898 65854 44883 185830 154000 192270 168830 206390 249900 194880 190660 256900 62004 66590 49887 54553 44205 105390 51788 63263 42782 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 309130000 9290 2702 8780 17688;17689 14196;14197 14197 2 9606 Homo sapiens 0.043966416827515786 FVVLETGGEAGITR Unmodified 1447.7671 0.76709352 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;Q7Z2W4-3 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 0 5.5 0.5 1 1 57.306 57.372 2 7.4007E-07 17039 20230619_1886_Aki_TMTPro18x_K_F6 178.53 152.79 63165 49722 60649 68645 55273 65470 65021 64226 76681 79786 79968 83109 85336 70734 75641 88502 74918 87918 58374 45680 61790 67707 58153 66396 65372 66135 77616 79895 82144 83792 86440 74320 77125 88582 71778 83464 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68393000 9291 2740 8781 17690;17691 14198;14199 14199 2 9606 Homo sapiens 0.061120659979224 FVVPKPR Unmodified 841.51741 0.51740818 669 Q8NCF7;A0A024RBE8;A0A024RBH9;Q00325-2;Q00325;F8VVM2;Q53HC3;B2RE88 SLC25A3 Phosphate carrier protein, mitochondrial yes no 0 0 1 5.5 0.5 1 1 44.606 44.69 3 0.0076341 11547 20230619_1886_Aki_TMTPro18x_K_F6 105.27 81.297 282680 282210 355690 350180 598510 429690 421530 348330 262800 227960 320660 171370 134230 87274 423750 93691 102320 69945 262310 258760 358560 349080 595220 427240 430360 358490 278960 235050 317730 174090 156060 93270 406250 93829 100780 66804 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155670000 9292 669 8782 17692;17693 14200;14201 14201 2 9606 Homo sapiens 0.09031017693519061 FVVQNVSAQK Unmodified 1118.6084 0.60840804 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72;B4DZB4 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 2 0 1 49.201 49.266 2 1.4641E-09 14088 20230619_1881_Aki_TMTPro18x_K_F2 206.43 150.31 98826 69513 79726 94581 93286 109340 100680 90823 123920 108550 99012 87025 110280 82069 90812 128580 108420 87670 91156 63882 82883 93598 96155 108990 101750 94559 123940 108160 103150 89252 111220 87288 93862 126070 103420 83779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94520000 9293 769 8783 17694 14202 14202 1 9606 Homo sapiens 0.053848168803369845 FVVTDGGITR Unmodified 1063.5662 0.56620887 1875 A0A994J595;P54289-4;P54289-5;P54289;Q9UIU0;P54289-3;P54289-2;A0A994J5M8;H0Y715;Q9UDQ3 CACNA2D1;WUGSC:H_DJ0560O14.1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 7 0 1 49.482 49.566 2 0.0047329 13379 20230619_1887_Aki_TMTPro18x_K_F7 90.919 3.796 269100 216860 224620 237560 219650 281390 287540 236060 288730 317980 311980 273380 334230 246910 277630 302420 280870 290290 248460 198750 231970 238840 230720 280170 285910 246580 295160 315630 319680 278710 337410 258720 283620 302280 268770 275810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194770000 9294 1875 8784 17695 14203 14203 1 9606 Homo sapiens 0.036968414719467546 FVYKEEHPFEK Unmodified 1451.7085 0.70851601 2217 B2R5J1;I3L3J4;H6UMI1;Q6IAW1;O95166 GABARAP Gamma-aminobutyric acid receptor-associated protein yes no 0 0 1 7 0 1 47.433 47.521 4 0.0060044 12440 20230619_1887_Aki_TMTPro18x_K_F7 76.522 54.965 217700 184800 212460 224020 230320 232040 237400 233800 193280 256320 289390 214180 223160 165860 282880 179190 168780 124560 201310 169500 216570 223150 237690 234160 237740 239330 203410 256340 289130 217810 232300 173440 279720 177210 162290 119050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220950000 9295 2217 8785 17696 14204 14204 1 9606 Homo sapiens 0.0007300942347683304 FVYVWDTTSR Unmodified 1272.6139 0.61388734 1897 B2R9I9;A0MNP2;Q96DI7;Q96DI7-2;Q9NSS8 WDR57;SNRNP40;DKFZp434D199 U5 small nuclear ribonucleoprotein 40 kDa protein yes no 0 0 0 2 0 1 60.787 60.798 3 0.00010135 18936 20230619_1881_Aki_TMTPro18x_K_F2 104.39 87.854 9216.2 9043.2 13370 13643 9874.7 12969 12101 12041 14792 12282 13957 12619 15336 11915 12687 14768 15151 14302 8564.3 8310.3 13187 13386 10601 13135 12163 12378 14873 12417 14407 12783 15477 12470 13095 14762 14467 13592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11435000 9296 1897 8786 17697 14205 14205 1 9606 Homo sapiens -0.011515043278677695 FWAYEQYK Unmodified 1133.5182 0.51819605 2648 B7ZB41;B4E290;Q6NUK1-2;Q6NUK1 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes no 0 0 0 1.5 0.5 1 1 59.157 59.169 2 0.011785 18159 20230619_1880_Aki_TMTPro18x_K_F1 91.064 49.489 74115 64802 66388 69259 85154 117370 91050 83236 114440 53006 50756 44537 54465 44413 55163 54784 45873 44237 68502 59360 68424 70200 87362 114190 92090 86571 112530 55097 55207 45654 55510 46368 55567 54307 43969 42134 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13995000 9297 2648 8787 17698;17699 14206;14207 14206 2 9606 Homo sapiens -0.04322232448112118 FWEGDFHR Unmodified 1092.4777 0.47772821 2568 B4DPV7;P49589-3;A8K067;B4DKY1;A0A024RCG3;P49589-2;P49589;A8MVQ3;B4DI19;Q53HG6;Q59HE5 CARS Cysteine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0 1 48.897 48.974 3 3.7506E-09 13308 20230619_1885_Aki_TMTPro18x_K_F5 161.02 129.95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9298 2568 8788 17700 14208 14208 1 9606 Homo sapiens -0.06481154047855853 FWESPETVSQLDSVR Unmodified 1778.8475 0.84752869 4016 Q58EY4;Q92922;Q05CR1;Q05BW5;F8WE13 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 0 5 0 1 61.347 61.398 2 4.7011E-33 18502 20230619_1885_Aki_TMTPro18x_K_F5 259.18 226.09 46721 34555 38408 43103 33727 44393 44852 42206 47893 54091 55735 51478 60400 53025 51777 59843 61155 62852 43112 31719 39676 42841 35777 44726 44678 43596 48956 53951 56987 52451 61101 55012 53364 60174 58434 59659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82748000 9299 4016 8789 17701 14209 14209 1 9606 Homo sapiens -0.010741174696931921 FWEVISDEHGIDPTGTYHGDSDLQLDR Unmodified 3101.4003 0.40027234 1486 P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;Q6LC01;B4DMU8;B4DMJ5 TUBB Tubulin beta chain yes no 0 0 0 4 1.41 1 1 1 1 1 61.633 61.662 4 2.4214E-98 19320 20230619_1881_Aki_TMTPro18x_K_F2 333.13 141.72 384410 342540 408300 422880 373530 455510 525170 575460 353140 439630 437760 544350 466770 348640 513600 468680 536320 668470 355830 314180 412510 421090 394510 460680 515700 575770 373240 454030 447510 540920 477360 372930 522480 480250 513850 632310 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1203400000 9300 1486 8790 17702;17703;17704;17705;17706 14210;14211;14212;14213;14214 14210 5 9606 Homo sapiens -0.06637178567643787 FWEVISDEHGIDPTGTYHGDSDLQLER Unmodified 3115.4159 0.4159224 3748;3381;3201 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;B4DNW1;M0R2D3;P04350;B4DJ43;M0QY85;M0R0X0;M0QY37;M0QX14;M0QZL7;M0QYM7;M0R278 TUBB2C;TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 0 0 4.5 0.5 1 1 61.512 61.538 4 3.0451E-61 18587 20230619_1885_Aki_TMTPro18x_K_F5 259.53 251.89 113530 104700 123670 123210 115320 122450 138690 151340 99273 122390 110890 110870 94082 79966 150050 91308 103280 106910 105130 95971 124660 122970 120870 124560 137370 151780 103950 124730 112650 111970 99155 84149 148690 92640 99291 101370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 573150000 9301 3748;3201;3381 8791 17707;17708 14215 14215 1 9606 Homo sapiens -0.05716892050577371 FWPAIDDGLR Unmodified 1188.5928 0.59275797 104 A0A8V8TQH6;A0A024R0Q4;A0A8V8TPY8;A0A8V8TRD4;Q8IV08;B4DEL6 PLD3 Phospholipase D3 yes no 0 0 0 6 0 1 62.386 62.437 2 0.0052491 19190 20230619_1886_Aki_TMTPro18x_K_F6 90.135 65.259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9302 104 8792 17709 14216 14216 1 9606 Homo sapiens 0.006005303632491632 FWPAIDDGLRR Unmodified 1344.6939 0.693869 104 A0A8V8TQH6;A0A024R0Q4;A0A8V8TPY8;A0A8V8TRD4;Q8IV08;B4DEL6 PLD3 Phospholipase D3 yes no 0 0 1 1.5 0.5 1 1 55.884 55.893 3 6.41E-06 16940 20230619_1881_Aki_TMTPro18x_K_F2 131.46 106.56 47875 39764 42447 47325 48440 51081 50728 50100 53831 56194 58179 56065 57509 49893 58295 61314 57330 63254 44231 36468 43688 47225 49893 51359 51117 51414 54858 56454 59456 56728 58753 52276 59231 61532 54904 60037 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79071000 9303 104 8793 17710;17711 14217 14217 1 9606 Homo sapiens 0.03530982065944954 FWTEVYPGAK Unmodified 1196.5866 0.58660996 3897 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 0 0 0 1 0 1 61.624 61.624 3 0.061248 19150 20230619_1880_Aki_TMTPro18x_K_F1 43.77 26.744 18563 17755 21787 22690 18986 22129 24638 21200 25700 25576 25787 25694 25927 25634 28174 28111 28646 31573 17207 16286 21832 22502 20089 22396 24544 21854 26126 25624 26470 26079 26589 26566 28636 28404 27424 29940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7148500 9304 3897 8794 17712 14218 14218 1 9606 Homo sapiens -0.003819878682406852 FWTHWNR Unmodified 1045.4882 0.48823332 3804 Q15428;Q05DF2 SF3A2 Splicing factor 3A subunit 2 yes no 0 0 0 6 0 1 49.15 49.228 3 0.0014239 13573 20230619_1886_Aki_TMTPro18x_K_F6 133.47 112.95 118650 103040 114840 115000 102160 122060 120430 128470 162210 108830 93035 94108 92509 80854 121080 105630 109160 87644 109720 94422 116790 115310 107760 123030 121650 130250 159990 110680 98759 95764 95838 85126 121860 104810 104410 83514 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94967000 9305 3804 8795 17713 14219 14219 1 9606 Homo sapiens -0.032691266027768506 FYALDPSFPR Unmodified 1211.5975 0.597509 3813 Q08J23-2;Q08J23;Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 0 0 0 1 0 1 61.368 61.368 2 0.0044522 19019 20230619_1880_Aki_TMTPro18x_K_F1 93.267 68.448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9306 3813 8796 17714 14220 14220 1 9606 Homo sapiens 0.0001741450603276462 FYALSASFEPFSNK Unmodified 1606.7668 0.76675917 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;B4DHR1 CALR;HEL-S-99n Calreticulin yes no 0 0 0 3 0.707 1 2 1 63.664 63.683 3;4 6.3009E-09 19967 20230619_1882_Aki_TMTPro18x_K_F3 160.22 141.86 1088300 861940 1124700 1073500 821270 1043000 1285400 1086200 1168200 1216400 1276300 1469200 1269000 1133000 1440400 1233000 1367300 1599200 1006400 790980 1135000 1066700 889810 1057700 1265500 1111100 1201000 1229700 1306100 1467500 1303700 1185300 1456500 1258600 1310500 1514200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2945599999.9999995 9307 1691 8797 17715;17716;17717;17718 14221;14222;14223 14221 3 9606 Homo sapiens -0.012353537219041755 FYAPWCGHCK Unmodified 1324.5481 0.54813274 4089 Q86UY0;Q6EHZ3;Q658S9;Q8NBS9;A0A024QZV0;Q8NBS9-2 TXNDC5;STRF8;DKFZp666I134;hCG_1811539 Thioredoxin domain-containing protein 5 yes no 0 0 0 4 0 1 49.827 49.862 3 0.0010618 13954 20230619_1883_Aki_TMTPro18x_K_F4 93.178 85.976 191130 171690 187760 171710 190490 262760 236780 211330 279670 132310 150910 143870 139810 124620 148230 145870 143940 153090 176820 157170 191070 174710 199350 257520 237210 217350 276790 138640 160400 145010 143540 130290 150340 146660 137830 145290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85046000 9308 4089 8798 17719 14224 14224 1 9606 Homo sapiens -0.10115940046057403 FYAYNPLAGGLLTGK Unmodified 1583.8348 0.83477916 3062 H3BLU7;V9HWA2;O43488;Q8NHP1 AKR7A2;HEL-S-166mP;AKR7L Aflatoxin B1 aldehyde reductase member 2;Aflatoxin B1 aldehyde reductase member 4 yes no 0 0 0 5.5 0.5 1 1 63.882 63.928 3 6.8113E-08 19886 20230619_1886_Aki_TMTPro18x_K_F6 135.24 116.83 213030 177530 193830 220720 191340 219270 236130 233420 247360 209520 240460 250340 224700 238770 277390 226370 227340 298840 196860 162880 198650 219350 200220 222140 235840 236910 250890 214330 246560 251880 232590 245910 278120 231910 218490 282810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 402280000 9309 3062 8799 17720;17721 14225 14225 1 9606 Homo sapiens 0.06621515928736699 FYDISSGCIR Unmodified 1216.5547 0.55465791 4556 Q9NP58-4;Q9NP58;A0A024R436 ABCB6 ATP-binding cassette sub-family B member 6, mitochondrial yes no 0 0 0 8 0 1 52.837 52.912 2 2.7785E-19 14824 20230619_1888_Aki_TMTPro18x_K_F8 255.54 218.44 93301 77667 90509 94165 79183 94767 104400 98417 102540 79747 87115 79135 82160 65603 100760 85726 78912 80317 86261 71241 92045 93771 83852 95849 103740 99827 103850 81596 89896 79970 84846 69195 100840 85574 75723 76338 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62056000 9310 4556 8800 17722 14226 14226 1 9606 Homo sapiens -0.04495723613717928 FYDLSSK Unmodified 858.41233 0.41233399 179 Q53GN6;A0A024R201;Q9UNM6;J3KNQ3;B2RBM7;Q9Y6E3;Q9UNM6-2;B4DJ66;H0YD73;E9PL38 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 7.5 0.5 1 1 52.645 52.718 2 0.0057599 14710 20230619_1888_Aki_TMTPro18x_K_F8 138.33 71.339 710110 548350 627370 639020 737820 775310 723870 669030 859060 763390 792510 756220 887100 634460 753160 891610 851260 830600 655750 502930 645850 639760 757340 771460 734710 693440 864850 766530 820050 764300 895290 672570 774390 887990 813380 789630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 517170000 9311 179 8801 17723;17724 14227;14228 14228 2 9606 Homo sapiens -0.02253568293576791 FYDSNTVK Unmodified 972.45526 0.45526144 3839 Q13177;A8K5M4;H9XFB4 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase yes no 0 0 0 6.5 0.5 1 1 46.699 46.785 2 0.022087 12512 20230619_1886_Aki_TMTPro18x_K_F6 95.358 32.7 163920 116660 136260 153880 153020 148230 154260 157740 197770 171660 197540 192910 208100 161840 185750 189660 211790 203180 151230 107170 141040 152260 157630 150580 156830 160890 198920 173420 203100 193860 210900 169520 190730 190900 202330 192870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 287810000 9312 3839 8802 17725;17726 14229 14229 1 9606 Homo sapiens -0.03206798236146824 FYDSWESTVK Unmodified 1260.5663 0.56626845 2828 Q9H4A3-7;Q9H4A3;D3DUP1;F5GWT4;D3DUP2;Q9H4A3-6;Q9H4A3-2;Q9H4A3-5;F6UYG0 WNK1 Serine/threonine-protein kinase WNK1 yes no 0 0 0 6 0 1 59.015 59.081 3 0.056661 17736 20230619_1886_Aki_TMTPro18x_K_F6 42.161 27.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9313 2828 8803 17727 14230 14230 1 9606 Homo sapiens -0.05359203318744221 FYEAFSK Unmodified 890.41742 0.41741937 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9;Q58FF4 HSP90AB1;HSP90Bf Heat shock protein HSP 90-beta yes no 0 0 0 4.2 2.79 1 1 1 1 1 56.012 56.047 2 0.0065321 16823 20230619_1880_Aki_TMTPro18x_K_F1 132.29 67.419 8205900 6833000 7634000 7969500 7699800 8296200 8417800 8173800 9167700 10084000 9818900 8850300 10711000 8443800 9171700 12165000 9799100 10443000 7584200 6265200 7805100 7961300 8011600 8364200 8470900 8410000 9330100 10051000 10075000 9035200 10826000 8922200 9405300 12059000 9374100 9935100 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 8477999999.999999 9314 751 8804 17728;17729;17730;17731;17732 14231;14232;14233;14234 14231 4 9606 Homo sapiens -0.03217264430952582 FYEDNGQLDDAR Unmodified 1441.611 0.61098681 4090 Q68CN2;Q71SV8;Q9HCS7 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 yes no 0 0 0 1 0 1 47.037 47.037 2 1.0574999999999999E-23 13136 20230619_1880_Aki_TMTPro18x_K_F1 252.97 238 46287 35967 39257 45955 47894 58588 54740 50486 58706 59660 59626 62478 61840 56225 59245 62263 65764 70702 42733 33017 40649 45736 49306 58080 54897 52385 59636 59897 61258 63068 62950 58522 60668 62938 62894 67046 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55213000 9315 4090 8805 17733 14235 14235 1 9606 Homo sapiens -0.09215424243325288 FYEEVHDLER Unmodified 1335.6095 0.60953025 717;661;2990 Q99733-2;Q99733;B4DS05;B7ZB83;B7ZAK9;A0A024RCC9;A0A2U9QGI0;C9JZI7;A0A994J3W0;B7ZAC7;A0A0J9YXQ2;C9J6D1;E9PKT8;A8MXH2;E9PNJ7;E9PS34;E9PJJ2;E9PNW0;F8W543;H0YH88;P55209;F8VY35;H0YIV4;B7Z2V4;F5H4R6;F8W0J6;F8VUX1;A0A024RBB7;P55209-2;F8W020;F8VXI6;F8VV59;B7Z9C2;A0A024RBE6;P55209-3;F8W118;H0YHC3;B7Z5H0;F8VVB5;F8VRJ2 NAP1L4;NAP1L1 Nucleosome assembly protein 1-like 4;Nucleosome assembly protein 1-like 1 no no 0 0 0 2 0.816 1 1 1 49.435 49.481 3 3.5879E-14 14123 20230619_1880_Aki_TMTPro18x_K_F1 204.64 179.16 922680 690440 798720 873220 688650 861060 855380 772670 950500 1212700 1216700 1215900 1373800 1108700 1108400 1440800 1305800 1330900 851780 633840 820570 866580 729660 869490 855990 807630 974740 1201800 1242400 1230700 1384100 1164900 1144500 1435400 1247700 1265200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6107299999.999999 9316 717;2990;661 8806 17734;17735;17736 14236;14237 14236 2 9606 Homo sapiens -0.0448501354144355 FYEEVHDLERK Unmodified 1463.7045 0.70449327 717;661;2990 Q99733-2;Q99733;B4DS05;B7ZB83;B7ZAK9;A0A024RCC9;A0A2U9QGI0;C9JZI7;A0A994J3W0;B7ZAC7;A0A0J9YXQ2;C9J6D1;E9PKT8;A8MXH2;E9PNJ7;E9PS34;E9PJJ2;E9PNW0;F8W543;H0YH88;P55209;F8VY35;H0YIV4;B7Z2V4;F5H4R6;F8W0J6;F8VUX1;A0A024RBB7;P55209-2;F8W020;F8VXI6;F8VV59;B7Z9C2;A0A024RBE6;P55209-3;F8W118;H0YHC3;B7Z5H0;F8VVB5;F8VRJ2 NAP1L4;NAP1L1 Nucleosome assembly protein 1-like 4;Nucleosome assembly protein 1-like 1 no no 0 0 1 3.8 0.748 2 2 1 49.455 49.516 3;4 3.2474E-06 13732 20230619_1883_Aki_TMTPro18x_K_F4 147.63 103.07 348310 376850 375510 307810 331050 332790 369660 331650 365510 390330 370910 375840 407600 363850 374360 487210 474800 425850 322930 344260 378060 317450 347980 335110 370470 340550 373080 390880 382010 381980 413510 382080 387410 483850 452970 405300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3314899999.9999995 9317 717;2990;661 8807 17737;17738;17739;17740;17741 14238;14239 14239 2 9606 Homo sapiens -0.008810800702804045 FYEQFSK Unmodified 947.43888 0.43888309 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 5.33 3.09 1 1 1 53.326 53.374 2;3 0.0046141 15044 20230619_1887_Aki_TMTPro18x_K_F7 147.08 92.509 757050 617740 725810 775620 849970 929330 922430 837820 947070 1016200 992280 931370 1177300 913260 989920 1206300 1055800 1050600 699770 566870 742150 772250 874810 926020 926430 867070 966000 1014900 1023600 949360 1186200 958430 1014700 1198200 1009500 999550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 8979800000 9318 3177 8808 17742;17743;17744 14240;14241;14242 14241 3 9606 Homo sapiens -0.03693879402237599 FYEQMNGPVAGASR Oxidation (M) 1541.6933 0.69327665 2288;2925 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;H0YCK7;E9PIZ1;P29692;P29692-3;E9PK01;P29692-4;E9PQZ1;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;E9PK06;E9PMW7;E9PN91;E9PKK3;E9PK72 EEF1D Elongation factor 1-delta no no 0 1 0 6 0 1 39.596 39.684 3 0.036301 9388 20230619_1886_Aki_TMTPro18x_K_F6 44.989 32.843 35591 28076 33542 28858 38899 39785 38149 33159 45054 39675 43796 35886 38385 36633 39433 41112 40245 39866 32887 25719 34292 29245 39948 39273 38712 34508 45439 39661 44707 36658 39424 37986 40135 41172 38496 37879 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76834000 9319 2288;2925 8809 17745 14243 14243 1415 1 9606 Homo sapiens -0.055902254360262305 FYFENALSK Unmodified 1117.5444 0.5444108 1836 E9PBG7;Q13557-6;A0A994J5B0;D6R938;A0A8V8TNA7;A0A8V8TN65;A0A8V8TND4;Q13557-10;Q13557-8;E9PF82;Q13557-11;Q13557;B7Z2B0;A0A8V8TPK3;Q13557-3;A0A8V8TN88;A0A994J516;A0A8V8TN60;A0A8V8TPY4;A0A8V8TPJ8;A0A8V8TNA1;A0A994J7X8;Q13557-12;Q13557-5;Q13557-9;Q13557-4;H0Y9J2;Q92991 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 1 0 1 61.188 61.188 3 0.0093067 18972 20230619_1880_Aki_TMTPro18x_K_F1 70.056 25.747 34430 33719 40374 36264 39939 39548 38813 37450 39408 45210 42357 46235 48498 45434 41862 48344 46256 49293 31921 30877 40479 36484 41430 39724 39240 38615 40282 45301 43617 46845 49016 47031 42963 48575 44236 46797 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20012000 9320 1836 8810 17746 14244 14244 1 9606 Homo sapiens -0.009659632766442883 FYFENLLSK Unmodified 1159.5914 0.59136099 1721 A0A8V8TQ77;A0A804CJ50 no no 0 0 0 3 0 1 63.712 63.743 3 0.013583 20024 20230619_1882_Aki_TMTPro18x_K_F3 67.563 41.624 23076 16292 19911 21997 18368 21760 27761 24951 25635 22017 23372 31059 22502 22841 22235 28247 28485 27429 21295 14970 20487 21743 19459 22085 27369 25206 26127 22677 24108 30824 23016 24089 22992 28238 27186 26065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35785000 9321 1721 8811 17747 14245 14245 1 9606 Homo sapiens 0.017948962745094832 FYFHDGVR Unmodified 1039.4876 0.48756462 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6 IPO5;RANBP5 Importin-5 yes no 0 0 0 6 2.92 1 1 2 43.703 43.733 3 0.0003582 10956 20230619_1888_Aki_TMTPro18x_K_F8 145.34 92.175 197540 152980 169810 167160 157340 162350 176750 180030 205290 239810 209660 203740 247000 201400 167630 298760 262690 250770 182390 140220 174570 167710 164950 165050 178040 184250 207970 238000 216400 208530 247180 212990 177820 295550 250340 238740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 584580000 9322 782 8812 17748;17749;17750;17751 14246;14247;14248;14249 14248 4 9606 Homo sapiens -0.030599660424968533 FYGDEEK Unmodified 886.37086 0.37086311 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;B4DHR1;K7EJB9 CALR;HEL-S-99n Calreticulin yes no 0 0 0 2.57 1.4 2 2 1 1 1 44.87 44.921 2;3 0.013637 11781 20230619_1882_Aki_TMTPro18x_K_F3 119.57 54.789 1466600 979370 1354200 1415800 1773800 1791900 1675200 1714600 2183700 1815800 2248300 2634000 1803000 1989200 1548300 2017500 2045000 2446400 1353700 900860 1391500 1398500 1806400 1781600 1710400 1759600 2196500 1855000 2286100 2613400 1845700 2072500 1609200 2049700 1954600 2317600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4818700000 9323 1691 8813 17752;17753;17754;17755;17756;17757;17758 14250;14251;14252;14253 14252 4 9606 Homo sapiens -0.07686749052902542 FYGDLMEK Unmodified 1001.4528 0.4528186 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8;A0A8V8TQ76;A0A8V8TRI2 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 0 0 6 0 1 57.559 57.628 3 0.043679 17127 20230619_1886_Aki_TMTPro18x_K_F6 59.35 19.641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9324 117 8814 17759 14254 14254 1 9606 Homo sapiens -0.047849699654420874 FYGEPVIK Unmodified 951.50657 0.50656873 1474 A0A384NPM7;Q8NBX0 SCCPDH Saccharopine dehydrogenase-like oxidoreductase yes no 0 0 0 7.5 0.5 1 1 54.162 54.23 2 0.0010192 15432 20230619_1887_Aki_TMTPro18x_K_F7 150.84 46.389 163420 149690 147080 242750 282000 313440 311120 293380 325680 243000 257700 286410 283640 245340 241950 284900 293400 326450 151090 137710 153500 238100 283000 310930 312110 299780 328040 249750 268940 287400 286790 256550 249850 287850 280450 309500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166480000 9325 1474 8815 17760;17761 14255;14256 14255 2 9606 Homo sapiens 0.028875705285599906 FYGPQGTPYEGGVWK Unmodified 1684.7886 0.78855725 1936 H7C4M9;C9JZG9;C9JZY6;A4D1L5;P62256-2;P62256 UBE2H Ubiquitin-conjugating enzyme E2 H yes no 0 0 0 1 0 1 59.72 59.72 3 0.00072232 18366 20230619_1880_Aki_TMTPro18x_K_F1 80.534 47.33 55500 51944 60969 53802 47462 65337 63845 66137 87784 42035 43133 35286 43111 38711 55825 43324 47327 49295 51407 47558 61254 54386 50934 65191 64149 66847 86124 43665 46330 36304 44634 40075 56004 43836 45378 46750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25562000 9326 1936 8816 17762 14257 14257 1 9606 Homo sapiens -0.02644548973376004 FYHDWNDK Unmodified 1123.4723 0.47230849 3129 J3KQ32;Q9NTK5;Q53SQ6;Q9NTK5-2;B4DK14;Q9NTK5-3;C9JCJ9 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 0 6 0.816 1 1 1 46.687 46.769 3 0.00047464 12489 20230619_1886_Aki_TMTPro18x_K_F6 136.21 123.99 211790 108390 178390 214330 177810 221840 240200 243170 286260 248470 254220 301750 308790 257690 219260 312810 310680 302220 195120 100270 184270 207650 186740 223980 239930 247110 287650 252480 264950 302360 309240 270130 230090 312600 296310 287190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 371000000 9327 3129 8817 17763;17764;17765 14258 14258 1 9606 Homo sapiens -0.08448877630348761 FYHEACVK Unmodified 1052.475 0.47495102 3369 O96028;A0A7I2YQS5;O96028-2 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 0 0 0 7 0 1 40.719 40.787 3 0.0022981 9551 20230619_1887_Aki_TMTPro18x_K_F7 105.57 76.481 60992 28082 51034 52899 53234 52028 51409 53055 64627 53494 49686 43659 66528 45768 45752 69842 69201 55804 56167 25976 52697 51339 55067 52679 52359 54141 64503 53770 52354 44913 66338 48455 48309 68934 65892 53201 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83216000 9328 3369 8818 17766 14259 14259 1 9606 Homo sapiens -0.04918745497047894 FYIDPYK Unmodified 944.46437 0.46436956 4625 Q9NY12-2;Q9NY12 GAR1 H/ACA ribonucleoprotein complex subunit 1 yes no 0 0 0 7.5 0.5 1 1 57.824 57.876 2 0.0090158 16923 20230619_1888_Aki_TMTPro18x_K_F8 119.89 65.479 181910 163750 182220 211860 189100 227660 239690 235110 237730 273570 267960 288830 292200 244290 273290 310050 303510 328710 168310 150260 185430 210180 197300 229120 238680 240710 243700 274760 274750 290970 296540 256990 280110 311430 290280 311920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161440000 9329 4625 8819 17767;17768 14260 14260 1 9606 Homo sapiens -0.010084048798148615 FYNELTEILVR Unmodified 1395.7398 0.73981614 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B4DHD2;B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 8 0 1 64.535 64.556 2 9.1254E-06 19770 20230619_1888_Aki_TMTPro18x_K_F8 161.67 135.93 40404 29438 33260 41853 37419 36827 40834 42554 48613 45134 46768 49085 52910 51095 45525 59334 53223 67099 37280 27063 34490 41167 38621 37755 41215 43153 49012 45606 48352 49741 53505 53061 46930 59881 50945 63597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186400000 9330 3981 8820 17769 14261 14261 1 9606 Homo sapiens 0.0577758245754012 FYNNVQGLVPK Unmodified 1277.6768 0.67682195 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 0 3 0.816 1 1 1 57.895 57.912 3 0.0027474 17553 20230619_1882_Aki_TMTPro18x_K_F3 73.841 60.072 86308 73901 79614 80644 81091 91133 93414 93185 105610 89878 83579 84069 95486 73244 96182 102730 92044 100360 79779 67712 81467 81069 84479 91423 93840 94955 106010 90854 87341 85279 97061 77514 97603 102600 88164 95312 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42777000 9331 1532 8821 17770;17771;17772 14262 14262 1 9606 Homo sapiens 0.04909061460148223 FYPDRPHQK Unmodified 1186.5883 0.5883413 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8;F5H2X1;B7Z842;H3BUV0;H3BTM1;H3BRA2;H3BQD1 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 1 1.5 0.5 1 1 35.1 35.128 4 0.00048402 7729 20230619_1881_Aki_TMTPro18x_K_F2 126.31 81.56 236170 190280 203310 219590 243480 235290 238630 247650 294420 299470 320440 314180 348780 285160 260880 363640 372480 339770 218110 174470 209920 219630 249500 237160 242660 253490 297920 300320 328620 317430 350910 299260 273540 362520 355080 323090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 244340000 9332 1601 8822 17773;17774 14263;14264 14264 2 9606 Homo sapiens 0.0025106594034696172 FYPEDVAEELIQDITQK Unmodified 2036.9943 0.99425251 3456 P15311;Q6NUR7;V9HW42;B7Z5V2;J7M2B1 EZR;HEL-S-105;EZR-ROS1 Ezrin;Tyrosine-protein kinase receptor yes no 0 0 0 5 0 1 68.135 68.178 3 1.4812E-06 21446 20230619_1885_Aki_TMTPro18x_K_F5 112.96 92.858 4111.7 3694.5 2703.2 3484.4 5854.9 4752.7 6229.9 5895.2 4657.1 3442.3 5431.9 5006.2 4950.2 4995.2 4531.4 7087.3 5933.2 6103 3793.5 3380.5 2915.4 3555.9 5826.4 4741.5 6206.3 5877.2 4857.3 3657.9 5514 5023.8 5054.6 5256.9 4707.2 7025.3 5664.5 5806.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5625300 9333 3456 8823 17775 14265 14265 1 9606 Homo sapiens 0.017235149047564846 FYPPDPAQLTEDITR Unmodified 1761.8574 0.85736509 3431;1013 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;P11171-5;Q4VB87;A0A994J847;Q29RX4;A0A2R8YCW8;A0A3B3ITP0;P11171-7;A0A2R8Y5Z6;A0A2R8Y7Y3;A0A2R8Y5G2;P11171-6;A0A2R8Y570;A0A2R8Y420;A0A3B3IU06;A0A2R8YFR9;A0A2R8Y6G5;A0A3B3IUD6;A0A2R8Y7N0;A0A2R8Y6D0;A0A1B0GWG0;A0A3B3ITC5;A0A2R8Y6T6;Q4VXN1;Q4VXN0;B3KUB6;A0A0C4DH22;A0A1B0GTW6;Q9H4G0-4;Q9H4G0-3;Q9H4G0-2;Q9H4G0;B7Z653 EPB41;EPB41L1 Protein 4.1;Band 4.1-like protein 1 no no 0 0 0 4.5 0.5 1 1 62.886 62.913 2 9.2062E-09 19251 20230619_1885_Aki_TMTPro18x_K_F5 145.29 122.97 75905 60129 77122 75818 56377 73220 62290 68853 65508 88607 86151 94395 88328 78896 88160 97184 89724 109100 70182 55186 77918 75257 60444 74118 62661 71173 67486 88612 87587 95005 90085 82864 89794 98002 85967 103430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164780000 9334 3431;1013 8824 17776;17777 14266 14266 1 9606 Homo sapiens 0.006910705356858671 FYPWTIDNK Unmodified 1182.571 0.5709599 4126 Q6PD74 AAGAB Alpha- and gamma-adaptin-binding protein p34 yes yes 0 0 0 2 0 1 61.815 61.825 2 0.0015344 19334 20230619_1881_Aki_TMTPro18x_K_F2 114.89 84.324 69954 57651 65375 68728 52935 75444 71293 74872 84635 83478 67377 66619 80599 63486 68701 93356 80955 87133 64652 52874 66648 68599 56622 75727 71243 76733 84822 83396 70512 68318 81265 67207 70885 92901 77382 82802 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44804000 9335 4126 8825 17778 14267 14267 1 9606 Homo sapiens -0.013022743852843632 FYQGFLFSEKPEK Unmodified 1618.8031 0.80314468 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 2.5 0.5 1 1 60.621 60.641 3 8.8495E-08 18851 20230619_1881_Aki_TMTPro18x_K_F2 153.7 124.36 267340 211960 228960 224430 202930 255830 239670 242390 298460 351380 264110 298860 459160 360320 198320 553870 478110 563450 246860 194220 235380 226170 214270 256040 241380 251380 299980 347740 281030 308180 450190 380170 223690 552770 455340 534760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 244620000 9336 3758 8826 17779;17780 14268;14269 14268 2 9606 Homo sapiens 0.018495231747920116 FYQVPVPLPDR Unmodified 1329.7081 0.70812208 522 A0A024R8L0;J3QLS3;Q9Y2R9;J3KSI8;J3QQS1 MRPS7 28S ribosomal protein S7, mitochondrial yes no 0 0 0 2 0 1 60.159 60.171 2 0.00082366 18713 20230619_1881_Aki_TMTPro18x_K_F2 108.43 74.355 21392 18421 23596 20751 19827 30781 20913 23634 27518 24706 23234 25308 20861 20079 27157 25036 25987 25116 19804 16883 23720 20903 20999 30180 21244 24651 27486 24939 23963 25478 21684 21135 27428 25092 24869 23858 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26700000 9337 522 8827 17781 14270 14270 1 9606 Homo sapiens 0.05645634494248952 FYRPENTHK Unmodified 1190.5833 0.58325592 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;A0A7I2V311;A0A7I2V5F6 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 1 1.5 0.5 1 1 34.84 34.868 4 0.047667 7596 20230619_1881_Aki_TMTPro18x_K_F2 64.04 29.319 149950 120660 159550 137240 140900 155960 149020 145990 177000 180060 190670 164220 188860 164050 154690 203810 183420 148170 138710 110620 160850 137570 148060 156100 150730 150720 179310 179710 194680 167570 191220 171240 159750 200950 174980 141450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166510000 9338 442 8828 17782;17783 14271 14271 1 9606 Homo sapiens -0.0044123792226855585 FYSFLVLK Unmodified 1015.5743 0.57425436 577 A0A024R9J0;O60216;B3KUT8;E5RG18;A0A804HJ87;F6KSS9;Q9H4I0 RAD21;RAD21L;RAD21L1 Double-strand-break repair protein rad21 homolog;Double-strand-break repair protein rad21-like protein 1 yes no 0 0 0 6 0 1 64.273 64.319 3 0.018763 20049 20230619_1886_Aki_TMTPro18x_K_F6 75.38 31.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9339 577 8829 17784 14272 14272 1 9606 Homo sapiens 0.06709020459379644 FYSLLDPSYAK Unmodified 1302.6496 0.64960415 247 A0A024R3J7;P46977;P46977-2 hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 0 0 2.33 0.471 2 1 62.959 62.968 2;3 2.1146E-06 19951 20230619_1881_Aki_TMTPro18x_K_F2 153.12 139.44 449170 328480 428690 507340 409010 535300 556830 543380 620440 598900 575190 663560 691110 605540 546830 717100 670640 779070 414900 302270 437560 497730 431060 538890 554720 556130 626760 604310 597870 668570 695070 632450 566400 721760 641220 738910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 376170000 9340 247 8830 17785;17786;17787 14273;14274;14275 14274 3 9606 Homo sapiens 0.010385331291445254 FYSLPQSPQQFK Unmodified 1468.7351 0.73506511 2038 A8K4A8;Q6PI48;Q9H9J7;A0A3B3IS01;A0A3B3IT01;A0A3B3ISK7;A0A3B3ITS3;A0A3B3IS54 DARS2 Aspartate--tRNA ligase, mitochondrial yes no 0 0 0 3 0 1 58.773 58.802 3 0.00090783 17913 20230619_1882_Aki_TMTPro18x_K_F3 89.403 68.977 80737 69474 83468 78832 71196 90940 91324 80564 96294 75883 74497 70004 88355 73279 90169 88639 77159 98134 74700 63677 84372 79034 75541 90786 91051 82929 96898 76827 78072 71501 89802 76334 90939 89359 74096 93031 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26806000 9341 2038 8831 17788 14276 14276 1 9606 Homo sapiens 0.019446983147872743 FYSVNVDYSK Unmodified 1220.5714 0.57135383 600 A0A024R9Z0;O00483 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes no 0 0 0 5.33 3.09 1 1 1 55.09 55.133 2;3 3.5303E-05 16476 20230619_1880_Aki_TMTPro18x_K_F1 152.54 116.6 299750 276470 300500 345550 320050 397830 396180 370840 415960 308130 327720 320100 332370 280450 347260 358310 380520 378350 277400 253580 305890 343910 333210 397550 395500 379130 418740 315330 340670 323280 339860 294770 354750 359900 363740 359150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 393320000 9342 600 8832 17789;17790;17791 14277;14278 14277 2 9606 Homo sapiens -0.03010899456126026 FYSVYGSGQR Unmodified 1162.5407 0.5407224 3144 J3QLR8;Q9Y3D9 MRPS23 28S ribosomal protein S23, mitochondrial yes no 0 0 0 3 0.816 1 1 1 47.049 47.115 2 0.00051597 12913 20230619_1882_Aki_TMTPro18x_K_F3 121.64 110.49 172330 146230 183570 178370 178400 212160 208800 197260 212710 199890 218290 210780 219870 189960 198720 211950 210830 226550 159470 134130 185470 177970 186570 211590 208900 202640 216650 202240 223730 212820 223360 197810 203190 213430 201710 214970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 167450000 9343 3144 8833 17792;17793;17794 14279 14279 1 9606 Homo sapiens -0.034046330504679645 FYTEDSPGLK Unmodified 1155.5448 0.54480473 3675 P60468;Q53FA5;S4R3B5 SEC61B Protein transport protein Sec61 subunit beta yes no 0 0 0 4.5 0.5 2 2 51.96 52.011 2;3 1.0183E-06 14572 20230619_1885_Aki_TMTPro18x_K_F5 207.29 167.24 323290 254340 295960 349310 347260 369260 391120 355880 402220 396000 378210 403800 443090 346780 373780 454580 422960 411810 298660 233650 304040 345090 357690 371550 392010 365700 408360 398300 392190 407640 446710 365360 384460 452460 404130 391630 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 785020000 9344 3675 8834 17795;17796;17797;17798 14280;14281;14282 14281 3 9606 Homo sapiens -0.026745883474404764 FYTGNDPLDVWDR Unmodified 1596.7209 0.72087161 3282 O60566-3;O60566;O60566-2 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes no 0 0 0 4 0 1 62.951 62.958 2 2.9038E-08 19576 20230619_1883_Aki_TMTPro18x_K_F4 188.27 165.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9345 3282 8835 17799 14283 14283 1 9606 Homo sapiens -0.05361998904186294 FYTHLYK Unmodified 970.49125 0.49125301 2129 Q8WTT2;A8K905;B4DXL4 NOC3L Nucleolar complex protein 3 homolog yes no 0 0 0 4 0 1 47.804 47.844 3 0.0022511 12986 20230619_1883_Aki_TMTPro18x_K_F4 114.78 67.716 60691 44305 53853 55829 48392 57274 68168 62864 90862 51172 49937 56282 78127 66062 52816 77575 77729 63776 56029 40676 55220 55467 51308 57918 68232 63545 89533 52599 54416 57285 77687 68407 55654 76933 74033 60772 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218690000 9346 2129 8836 17800 14284 14284 1 9606 Homo sapiens 0.004827037313816618 FYTKPPQCVDIPADLR Unmodified 1918.9611 0.96111866 2157 Q05DS5;A8KAM5;Q8N474 SFRP1 Secreted frizzled-related protein 1 yes no 0 0 1 1.5 0.5 1 1 55.544 55.554 3 7.255E-08 16810 20230619_1881_Aki_TMTPro18x_K_F2 122.01 104.15 136290 125530 152360 97473 109810 120520 139660 142890 183780 280330 329550 423040 297210 301040 335630 328600 313920 399150 126250 114690 152460 101350 118250 120800 140640 148070 190770 280020 330550 418380 306400 315760 339420 333770 301160 378050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 423800000 9347 2157 8837 17801;17802 14285;14286 14286 2 9606 Homo sapiens 0.03839654371722645 FYTLIPHDFGMK Oxidation (M) 1483.717 0.71697221 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 1 0 3.5 0.5 1 1 60.856 60.872 3 1.1817E-05 18744 20230619_1882_Aki_TMTPro18x_K_F3 129.34 99.362 286590 245090 268000 330130 350060 334860 295380 322640 312730 325200 353980 317150 322620 296760 351200 334680 329490 365130 264930 225040 275290 326330 355280 338070 301700 330500 319410 328240 359720 321800 331700 308770 355350 337490 315710 346350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 248730000 9348 261 8838 17803;17804 14287 14287 152 1 9606 Homo sapiens -0.005537599316085107 FYTLIPHDFGMK Unmodified 1467.7221 0.72205759 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 3 0 1 62.192 62.221 3 7.9109E-10 19328 20230619_1882_Aki_TMTPro18x_K_F3 178.32 135.14 222170 181830 216330 220300 163230 221450 214290 214990 219050 259120 230480 229420 258980 214880 259430 259940 249640 252700 205390 166800 219510 219380 175430 223610 213380 221270 223590 258530 237260 233730 263370 224580 263260 260100 238960 240080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 633170000 9349 261 8838 17805 14288 14288 1 9606 Homo sapiens 0.006905439310230577 FYTQQWEDYR Unmodified 1434.6204 0.62042929 898 A0A590UJ56;A0A590UJR3;A0A590UJ50;A0A090N7U0;Q13616;A0A590UJ21;B3KTW0;A0A590UJC4;A0A590UK34;A0A590UJA0;A0A590UJM8 CUL1 Cullin-1 yes no 0 0 0 5.5 0.5 1 1 55.132 55.203 2 2.8884E-19 16083 20230619_1886_Aki_TMTPro18x_K_F6 255.07 226.33 93897 78476 94062 93399 92745 109600 101190 99691 114480 129880 122350 114840 137130 111500 109770 149370 133120 133540 86837 71969 95523 93328 96730 109370 101980 103320 116300 129180 125730 117210 138170 117150 113610 148490 127150 127000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148750000 9350 898 8839 17806;17807 14289 14289 1 9606 Homo sapiens -0.07949611167146031 FYVEDLK Unmodified 912.45928 0.45928418 1683 A0A8Q3SIG7;A0A8V8TM87;A0A8V8TM61;F5H578;A0A7N4I394;O75400-2;O75400;O75400-3;B4DPY2 PRPF40A Pre-mRNA-processing factor 40 homolog A yes no 0 0 0 5.5 0.5 1 1 56.986 57.052 2 0.0066915 16888 20230619_1886_Aki_TMTPro18x_K_F6 131.04 68.32 534430 427480 497020 566240 485050 573350 576230 596290 615690 672590 660530 707800 751510 629110 647690 778750 738170 812060 493820 392520 508310 560440 507560 579600 577100 609610 627210 676540 679890 714250 759150 659570 666180 781620 705910 770670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 381200000 9351 1683 8840 17808;17809 14290;14291 14291 2 9606 Homo sapiens -0.0004470874243907019 FYVHNDIFR Unmodified 1209.5931 0.59309232 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7I2V5M7;A0A7P0P2U7;A0A7I2YQU8;A0A7I2V651;A0A7I2V2V1 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 1.5 0.5 1 1 50.42 50.446 3 7.0072E-09 14534 20230619_1880_Aki_TMTPro18x_K_F1 182.98 140.98 287250 258520 274300 273100 272520 349100 314460 295060 367260 164680 139870 109130 125570 104830 220310 170650 150400 96455 265680 236770 279760 275710 284800 345940 316080 301720 361450 172160 153600 113460 133170 111690 218210 166460 144200 92597 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 655050000 9352 3846 8841 17810;17811 14292;14293 14292 2 9606 Homo sapiens -0.0033204991689217422 FYVHNDMFR Unmodified 1227.5495 0.54951295 755 Q9UN86;Q9UN86-2;A0A024RDE5;A0A024RDB2;A8K6V7;A0A7I2YQD9;A0A7I2V3P9;A0A7I2V3E2;A0A7I2V647;A0A7I2YQS2;D6RB17;D6RAC7;H0YAE3;A0A7I2V3R7;A0A7I2V481 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 0 3.67 3.09 1 1 1 48.75 48.794 3 4.578E-06 13865 20230619_1880_Aki_TMTPro18x_K_F1 152.79 141.96 116960 93028 111840 100110 85563 115810 109130 116880 138650 95633 79846 77336 91658 71438 98910 93945 94287 83353 108090 85251 113590 100810 91816 115910 109610 118720 137130 97310 85225 79173 93501 75110 100160 93474 90182 79322 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 119720000 9353 755 8842 17812;17813;17814 14294;14295;14296 14294 3 9606 Homo sapiens -0.055159826856652217 FYVHNDMFR Oxidation (M) 1243.5444 0.54442757 755 Q9UN86;Q9UN86-2;A0A024RDE5;A0A024RDB2;A8K6V7;A0A7I2YQD9;A0A7I2V3P9;A0A7I2V3E2;A0A7I2V647;A0A7I2YQS2;D6RB17;D6RAC7;H0YAE3;A0A7I2V3R7;A0A7I2V481 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 1 0 7.5 0.5 1 1 43.24 43.285 3 0.0081827 10807 20230619_1888_Aki_TMTPro18x_K_F8 69.276 62.387 105320 88167 102390 117770 121340 122150 121840 124580 151890 109660 110550 93873 101390 87818 107740 118840 114820 113020 97379 80951 104620 116530 124510 123250 123720 126700 151270 111230 114880 95922 104110 92433 109900 118560 109780 107410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 96068000 9354 755 8842 17815;17816 14297 14297 456 1 9606 Homo sapiens -0.0676028654829679 FYVPPTQEDGVDPVEAFAQNVLSK Unmodified 2649.2962 0.29624819 315 A0A024R4Z6;Q08945;E9PMD4 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 6.5 1.12 1 1 1 1 65.903 65.936 3 2.1235999999999998E-19 20722 20230619_1886_Aki_TMTPro18x_K_F6 148.66 140.35 82635 68285 70328 80996 71883 85406 85867 84078 74586 93377 92887 97624 101630 83783 87834 113670 93775 108580 76321 62623 72566 80814 74951 85993 85442 86246 77447 93947 94864 98466 102770 88465 90038 113380 89768 103130 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 640440000 9355 315 8843 17817;17818;17819;17820 14298;14299;14300;14301;14302 14299 5 9606 Homo sapiens 0.037571911334453034 GAAAAAAASGAAGGGGGGAGAGAPGGGR Unmodified 1951.9209 0.92086184 4094 Q68E01-2;Q68E01 INTS3 Integrator complex subunit 3 yes no 0 0 0 7.5 0.5 1 1 37.439 37.464 3 3.4491E-61 8440 20230619_1888_Aki_TMTPro18x_K_F8 247.64 238.59 9738 6749.7 8771.3 9692.9 12078 12865 11604 10310 14310 12500 11281 11550 12005 8500.8 10779 11566 14748 10974 8988.4 6207.1 9046.2 9582.2 12273 12708 11803 10769 14306 12492 11750 11659 12166 9039.6 11204 11538 14047 10443 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99860000 9356 4094 8844 17821;17822 14303;14304 14304 2 9606 Homo sapiens -0.0170217597451483 GAAAAATGQPGTAPAGTPGAPPLAGMAIVK Oxidation (M) 2587.3428 0.34282122 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 1 0 2 0 1 53.569 53.597 4 0.008624 15995 20230619_1881_Aki_TMTPro18x_K_F2 55.662 40.07 31909 19845 34174 31547 28768 40169 34989 33647 35151 36067 37990 40724 38574 38829 35894 53023 38570 54594 29479 18281 34440 30998 30530 39775 34938 34892 35919 36469 38893 41095 39267 40840 36799 53084 36989 51778 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80662000 9357 2263 8845 17823 14305 14305 1406 1 9606 Homo sapiens 0.11264352483794937 GAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHR Unmodified 3080.5612 0.5612387 4433 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha yes yes 0 0 0 5 0 1 57.669 57.728 4 1.9275E-15 17014 20230619_1885_Aki_TMTPro18x_K_F5 131.94 124.99 47590 36967 43276 42869 41680 42966 46922 43226 47132 47434 50123 43675 45863 41687 52520 41264 39048 46304 43958 33903 44289 42828 43538 43466 47022 44268 48124 47599 51077 44446 47254 43048 52486 41798 37541 43900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97374000 9358 4433 8846 17824 14306;14307 14306 2 9606 Homo sapiens 0.10418053379771663 GAAASPEPAR Unmodified 925.46174 0.4617438 1537;3770 A0A481SVA1;P84157;P84157-3;A0A481SUX4;P84157-2 MXRA7 Matrix-remodeling-associated protein 7 no no 0 0 0 2 0 1 27.97 28.044 2 0.0018244 4996 20230619_1881_Aki_TMTPro18x_K_F2 101.25 72.166 4901.4 2757.1 6547.1 5595.8 7759.4 8350 5939.3 9828 9422.9 6435 12702 14509 10182 10253 13526 4525.4 12556 13296 4535.9 2550.3 6525 5453.4 7916.1 8261 6216 9835.4 9511 6929.3 12784 14204 10637 10413 13591 5161.4 12028 12533 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8286800 9359 1537;3770 8847 17825 14308 14308 1 9606 Homo sapiens -0.003968602847749025 GAAFGFNVIATR Unmodified 1222.6459 0.64585618 1731 A0A804HJA4;J3KN16;Q5VYK3;B3KXF2 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 4.5 0.5 1 1 57.331 57.363 3 0.015329 16847 20230619_1885_Aki_TMTPro18x_K_F5 47.429 31.205 13837 10071 12542 15071 11643 15315 16272 16918 17660 17452 14516 20681 21841 21295 15845 20471 20196 21276 12776 9264.1 12856 14806 12310 15492 16179 17187 17801 17708 15402 20848 21798 21889 16483 20620 19289 20195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8652600 9360 1731 8848 17826;17827 14309 14309 1 9606 Homo sapiens 0.04343908145938258 GAAGALLVYDITR Unmodified 1318.7245 0.72450043 473;4277 A0A024R7V6;P61019;P61019-2;A0A0A1HAW1;E9PKL7;Q6PIK3;Q8WUD1;A0A3B3ITL1;Q5HYI5;B4DUD4;Q8WUD1-2;Q96K32 RAB2;RAB2A;RAB4B;RAB2B;DKFZp313C1541 Ras-related protein Rab-2A;Ras-related protein Rab-2B no no 0 0 0 1.5 0.5 1 1 61.325 61.33 2 3.5059E-15 19007 20230619_1880_Aki_TMTPro18x_K_F1 219.03 183.09 394630 319320 378370 386990 380510 475370 402700 382490 492510 376840 387290 416490 373390 367990 472210 416460 420610 526800 364750 292930 385850 386390 396280 471730 407490 397120 492140 382700 402150 419320 386580 383700 475320 424050 403670 498800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 571640000 9361 473;4277 8849 17828;17829 14310 14310 1 9606 Homo sapiens 0.07788715660353773 GAAGALMVYDITR Unmodified 1336.6809 0.68092105 492 A0A024R845;P61106;X6RFL8;A0A994J451;A0A994J4B9 RAB14 Ras-related protein Rab-14 yes no 0 0 0 1 0 1 58.397 58.397 2 1.0971E-20 17861 20230619_1880_Aki_TMTPro18x_K_F1 219.5 176.06 99225 86264 94797 100770 75174 93563 97634 95202 107870 99037 97220 96861 100500 80798 113180 112360 104710 109520 91753 79086 96419 100510 80335 95191 97482 97284 108870 99822 100440 97919 103030 85569 114400 112250 100300 104040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 416180000 9362 492 8850 17830 14311 14311 1 9606 Homo sapiens 0.026047828915579885 GAAGALMVYDITR Oxidation (M) 1352.6758 0.67583567 492 A0A024R845;P61106;X6RFL8;A0A994J451;A0A994J4B9 RAB14 Ras-related protein Rab-14 yes no 0 1 0 7.5 0.5 1 1 52.744 52.816 2 5.1691E-06 14747 20230619_1888_Aki_TMTPro18x_K_F8 138.4 120.53 78065 60618 67653 85121 80474 81455 78209 79533 94360 72131 82205 82778 67632 67699 89544 80691 80969 77251 72082 55704 69875 83857 82504 82602 79485 81219 94647 73653 84324 83059 70599 70953 90148 80726 77527 73424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102420000 9363 492 8850 17831;17832 14312 14312 302 1 9606 Homo sapiens 0.013604790289491575 GAAGFSIGK Unmodified 806.42865 0.42865276 1800 A0A8Q3SIP9;A0A8Q3WKG3;P82675 MRPS5 28S ribosomal protein S5, mitochondrial yes no 0 0 0 2 0 1 48.407 48.472 2 0.00020493 13730 20230619_1881_Aki_TMTPro18x_K_F2 136.75 99.194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9364 1800 8851 17833 14313 14313 1 9606 Homo sapiens 0.017695576632036136 GAAGRPLELSDFR Unmodified 1387.7208 0.72081203 668;675;4643 A0A024RBE7;P42167;G5E972;H0YJH7;A0A024RBH7;P42167-2;Q59G12;Q9P1N8 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 0 1 7.5 0.5 1 1 45.936 45.999 3 1.3774E-06 11720 20230619_1887_Aki_TMTPro18x_K_F7 122.34 60.042 832050 680810 741070 869980 759440 830160 844930 812470 860800 833730 925970 936570 991290 817690 880080 981890 1019100 1009000 768670 624850 761410 862360 789700 842120 847600 832230 878630 844570 949950 942340 1004300 856170 905100 985320 973640 958110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1672799999.9999998 9365 668;675;4643 8852 17834;17835 14314;14315 14314 2 9606 Homo sapiens 0.042460458864979955 GAAIPAK Unmodified 626.37516 0.37516062 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;A0A7I2V2S8 NCL Nucleolin yes no 0 0 0 7.5 0.5 1 1 39.844 39.871 2 0.0076748 9413 20230619_1888_Aki_TMTPro18x_K_F8 123.34 56.281 252720 110680 321360 342440 493020 480190 350810 490060 346750 206230 398690 483180 288760 342310 447810 138920 472790 404410 233530 103410 323330 328110 493940 474880 362310 492000 354890 231990 402710 472720 306410 346720 452160 158810 451650 381550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 247940000 9366 1658 8853 17836;17837 14316 14316 1 9606 Homo sapiens 0.047028049513301085 GAAMVTAVAYR Oxidation (M) 1124.5648 0.56482866 43;2017 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9;P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;B3KRA9 DKFZp686M1669;HK2;HK1 Hexokinase;Hexokinase-2;Hexokinase-1 no no 0 1 0 4.5 3.5 1 1 40.571 40.571 2 0.0073083 10351 20230619_1880_Aki_TMTPro18x_K_F1 74.2 42.621 49413 41052 43576 53815 78302 76742 71983 69269 102210 33139 33086 30691 31951 25956 50484 32747 44773 35222 45650 37685 45338 53571 78403 75691 73769 70306 99448 35497 37171 31150 33555 27305 50590 32993 42828 33463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29674000 9367 2017;43 8854 17838;17839 14317;14318 14317 17 2 9606 Homo sapiens 0.007528841115117757 GAAMVTAVAYR Unmodified 1108.5699 0.56991404 43;2017 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9;P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;B3KRA9 DKFZp686M1669;HK2;HK1 Hexokinase;Hexokinase-2;Hexokinase-1 no no 0 0 0 3 0 1 46.89 46.969 2 0.00011562 12766 20230619_1882_Aki_TMTPro18x_K_F3 136.57 102.83 136620 121980 136030 140710 169440 228970 179270 209800 252320 100370 109680 100790 94234 82174 141240 82109 120850 94832 126400 111800 138850 141740 174080 224230 182350 212540 246690 107600 118590 101760 98973 85391 141320 83429 115650 90033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78502000 9368 2017;43 8854 17840 14319 14319 1 9606 Homo sapiens 0.01997187974143344 GAANHDLTDTTR Unmodified 1270.5902 0.59019179 2468 B4DEQ7;Q96II8-3;Q96II8-4;Q96II8;Q96II8-2;F8WFB5;E9PD99;B4DU23 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 yes no 0 0 0 2.5 0.5 1 1 28.82 28.911 3 3.5218E-13 5364 20230619_1881_Aki_TMTPro18x_K_F2 187.58 162.72 10775 7354.5 12834 12575 17449 20397 18635 18483 27255 11798 22089 20383 21549 17980 16611 12940 21704 22308 9969 6778.7 12940 12364 17808 19971 18973 18833 26998 12577 22860 20232 21777 18370 17237 13623 20721 21087 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26213000 9369 2468 8855 17841;17842 14320 14320 1 9606 Homo sapiens -0.03427969832364397 GAAPNVVYTYTGK Unmodified 1339.6772 0.67721588 3000 F8WJN3;Q16630-3;Q16630;Q16630-2;F8W084;A0A3B3ISW1 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes no 0 0 0 2 0 1 51.513 51.558 3 5.5507E-08 15122 20230619_1881_Aki_TMTPro18x_K_F2 156.14 116.51 467080 383700 408430 492650 464920 512760 529500 469290 517300 512670 564670 513230 565570 454310 532640 667020 626490 591910 431460 352170 421190 488670 480160 515980 529630 483860 529560 515840 576890 519580 575540 481840 548120 662230 598270 563120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 568190000 9370 3000 8856 17843 14321 14321 1 9606 Homo sapiens 0.020964363893426707 GAAPPAAATAYDRH Unmodified 1367.6582 0.65821178 2726 C0KTE9;H0YB47;C0KTE8;C0KTE5;C0KTE3;C0KTE1;C0KTE2;E7ES87;E7ERK2;Q02548-10;Q02548-9;Q02548-7;Q02548-8;Q02548-6;Q02548-2;Q02548 PAX5 Paired box protein Pax-5 yes no 0 0 1 5 0 1 34.361 34.449 3 0.0033048 7337 20230619_1885_Aki_TMTPro18x_K_F5 55.841 36.709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9371 2726 8857 17844 14322 14322 1 9606 Homo sapiens -0.010911001817021315 GAAPPPPPVPR Unmodified 1054.5924 0.59236404 3807 Q07666;B4DDX2;B2R7B5;Q07666-2;B4E043;Q07666-3 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 0 0 0 8 0 1 39.333 39.319 2 3.3316E-06 9248 20230619_1888_Aki_TMTPro18x_K_F8 162.5 85.446 31930 26437 28618 29857 36065 38712 39827 35508 48573 35677 43762 36637 40771 33435 31442 41127 45112 34401 29502 24234 29471 29995 36982 38408 40183 36505 48738 36110 44930 37083 41269 34995 32940 40805 42956 32785 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53301000 9372 3807 8858 17845 14323 14323 1 9606 Homo sapiens 0.06725155434082808 GAAPTPPGK Unmodified 794.42865 0.42865276 1505 Q13428-4;A0A3B3IS06;Q13428-3;Q13428;Q13428-7;Q13428-6;Q13428-8;Q13428-2;E7ETY2;A0A6I8PRA0;B4DRA2;Q13428-5;H0Y8Y7;Q59FZ2;B4DLB1;H0YAB7 TCOF1 Treacle protein yes no 0 0 0 8 0 1 37.529 37.515 2 0.044527 8480 20230619_1888_Aki_TMTPro18x_K_F8 64.757 10.208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9373 1505 8859 17846 14324 14324 1 9606 Homo sapiens 0.023215576631855583 GAAVDEYFR Unmodified 1026.4771 0.47705951 4198 Q86X55-1;Q86X55;K7EQA8;Q86X55-2 CARM1 Histone-arginine methyltransferase CARM1 yes no 0 0 0 4 0 1 47.995 48.035 2 0.010225 13067 20230619_1883_Aki_TMTPro18x_K_F4 82.563 59.672 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9374 4198 8860 17847 14325 14325 1 9606 Homo sapiens -0.03511993487586551 GAAVSNNIVVRPSR Unmodified 1438.8005 0.80045934 1294 B7Z670;A0A1S5UZH4;Q14CA1;C9JYY6;Q92823-3;Q92823-4;Q92823-6;Q92823-2;Q92823;Q92823-5;C9JH43;Q4KMQ7;Q75ML9 NRCAM Neuronal cell adhesion molecule yes no 0 0 1 4.5 0.5 1 1 36.652 36.721 3 0.0012636 8178 20230619_1885_Aki_TMTPro18x_K_F5 82.1 61.323 32369 27095 32537 28465 36639 36609 40651 40699 51676 44737 45105 41412 49154 41055 42203 47306 48673 43797 29937 24820 33076 28773 37823 36515 41086 41381 51746 44912 46732 42198 49711 42695 43420 47232 46474 41654 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96725000 9375 1294 8861 17848;17849 14326 14326 1 9606 Homo sapiens 0.09861112560497531 GACHGQTGMFPR Oxidation (M) 1333.5656 0.56557372 1416 A0A384ME16;Q6ICN0;B0LPF3;P62993;B3KR50;P62993-2 GRB2 Growth factor receptor-bound protein 2 yes no 0 1 0 5 2.89 2 1 2 1 29.564 29.609 3 1.7351E-05 5417 20230619_1888_Aki_TMTPro18x_K_F8 121.36 105.82 38020 29001 37554 37065 41661 42588 42600 40322 49563 42395 54141 48262 49249 40011 43001 40405 54925 52922 35137 26624 38243 36845 42953 42602 43116 41413 50238 42927 55068 48461 50114 41593 44477 41308 52423 50141 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 130460000 9376 1416 8862 17850;17851;17852;17853;17854;17855 14327;14328;14329;14330;14331 14331 882 5 9606 Homo sapiens -0.08786644511064878 GACHGQTGMFPR Unmodified 1317.5707 0.5706591 1416 A0A384ME16;Q6ICN0;B0LPF3;P62993;B3KR50;P62993-2 GRB2 Growth factor receptor-bound protein 2 yes no 0 0 0 3.67 3.09 1 1 1 33.585 33.603 3 5.1842E-18 7404 20230619_1880_Aki_TMTPro18x_K_F1 196.67 136.23 88001 70013 88521 92574 96135 108390 99886 96160 110880 102980 123740 108870 114390 100990 111090 111540 126210 111520 81362 64288 90023 91825 99373 108110 100850 99278 112790 103920 125850 110060 116920 104980 113850 111930 120510 105980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 117450000 9377 1416 8862 17856;17857;17858 14332;14333;14334 14332 3 9606 Homo sapiens -0.07542340648456047 GACLLPK Unmodified 757.41565 0.41564523 2776 CON__P02769 yes yes 0 0 0 1.5 0.5 1 1 47.407 47.445 3 0.062495 13240 20230619_1881_Aki_TMTPro18x_K_F2 50.12 8.998 + 172860 215680 259750 204230 590710 639870 377360 362090 541550 240000 232160 225430 204840 157070 236080 223160 307690 273190 161020 197170 261300 212840 581640 607630 397430 385420 529440 249520 251550 227300 211580 167970 243370 225990 293460 259080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 277410000 9378 2776 8863 17859;17860 14335 14335 1 9606 Homo sapiens 0.027234032794467566 GACSVGTNVR Unmodified 1019.4818 0.48182731 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;A0A804HI02;B4DE53;I6L959;Q9BTW9-5;A0A804HIC0;A0A804HL21 TBCD Tubulin-specific chaperone D yes no 0 0 0 6.5 0.5 1 1 31.506 31.572 2 1.7464E-05 6375 20230619_1886_Aki_TMTPro18x_K_F6 161.79 113.23 21953 12168 33077 30406 36399 33211 29489 31919 22021 16826 32349 30499 24199 18549 41863 9595.5 27812 23719 20344 11299 32695 29217 37252 33321 29944 32303 23231 18216 32376 29930 25757 19074 41300 10685 26718 22394 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13572000 9379 1722 8864 17861;17862 14336;14337 14336 2 9606 Homo sapiens -0.027134326164514277 GADDAADADTAIINAEGGQNNSEEK Unmodified 2475.0633 0.063347716 891 Q9BY67-3;Q9BY67-4;X5D7A8;Q9BY67;Q9BY67-5;X5DNF2;X5DQR8;X5DQS5;X5D8W0;A0A087X1W8;A0A0A0MTJ8;Q6MZK6 CADM1;DKFZp686F1789 Cell adhesion molecule 1 yes no 0 0 0 1 0 1 50.839 50.839 3 6.788000000000001E-54 14701 20230619_1880_Aki_TMTPro18x_K_F1 257.75 248.89 61632 38005 44281 69401 46157 52061 54098 53322 61451 63109 41473 61004 87622 65264 36795 125150 81751 101420 56769 35080 46604 67191 48069 53946 54295 54695 61503 63202 45591 62248 85556 70359 41289 123170 77920 96508 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210440000 9380 891 8865 17863 14338 14338 1 9606 Homo sapiens -0.11518142394925235 GADDAMESSKPGPVQVVLVQK Unmodified 2154.0991 0.099068703 4099 Q6DD88;F5GWF8 ATL3 Atlastin-3 yes no 0 0 1 7 0 1 54.725 54.789 4 8.3197E-12 15656 20230619_1887_Aki_TMTPro18x_K_F7 141.86 126.61 31975 33311 34650 32371 29040 35190 33790 36386 40723 42854 40406 36622 43513 32282 39417 50237 41075 42727 29637 30472 34880 32840 30762 35412 34031 37246 41103 42766 41581 37346 44085 34409 40307 49739 39296 40656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207790000 9381 4099 8866 17864 14339 14339 1 9606 Homo sapiens 0.06818313109624796 GADDDRPSWR Unmodified 1173.5163 0.51629857 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 2.5 0.5 1 1 33.122 33.186 3 8.9066E-06 6937 20230619_1881_Aki_TMTPro18x_K_F2 158.79 133.94 181320 133770 164150 173490 180970 208770 199150 199200 226020 216000 211200 214750 241540 185020 193370 216900 238770 211500 167430 122840 168510 172390 187270 208160 200570 204570 228210 217380 218700 217020 243170 193620 200100 217110 227830 201040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 140990000 9382 3152 8867 17865;17866 14340;14341 14340 2 9606 Homo sapiens -0.06351893204009684 GADFLVTEVENGGSLGSK Unmodified 1778.8687 0.86865806 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;A0A024R609;H3BQ34;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 4.8 0.748 2 2 1 62.17 62.202 3;4 5.534099999999999E-19 19240 20230619_1883_Aki_TMTPro18x_K_F4 185.86 147.83 297990 227420 290390 302530 296510 388180 346600 331340 388680 394330 385700 401210 421090 354320 388570 472780 402720 462020 275370 208870 295890 300390 309360 384510 347840 344090 393610 395410 397550 405470 427080 373310 396970 472320 385590 438730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2327800000 9383 370;3451 8868 17867;17868;17869;17870;17871 14342;14343 14342 2 9606 Homo sapiens 0.010378478392112811 GADIDALCVAPR Unmodified 1256.6183 0.6183208 403 P51003;A0A024R6M3;B4DHB8;B4DYF4;G3XAH6;P51003-2;A0A0C4DGK1;G3V3I9;Q2TAI9;H7C3W0;Q05DB9;F8WAT4;Q9BWT3-2;Q9BWT3;Q53T17 PAPOLA;PAPOLG Poly(A) polymerase alpha;Poly(A) polymerase gamma yes no 0 0 0 4 0 1 50.153 50.188 2 0.00023128 14122 20230619_1883_Aki_TMTPro18x_K_F4 115.7 83.379 66944 58121 74414 80456 61131 80066 76418 68110 77588 87922 94798 97746 93359 87347 86949 96252 104380 97165 61982 53378 74824 79380 65021 80678 76227 70994 79691 88090 96415 98414 95086 90872 89538 96618 99650 92304 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191480000 9384 403 8869 17872 14344 14344 1 9606 Homo sapiens 0.0002763682339264051 GADIMYTGTVDCWR Oxidation (M) 1659.7021 0.70212678 3439;1072 A0A0S2Z3H3;P12235;A8K787;A0A0S2Z3C4;P12236;Q6I9V5;Q59EI9 SLC25A4;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 1 0 5.33 0.471 2 1 51.77 51.845 2;3 7.3627E-07 14536 20230619_1885_Aki_TMTPro18x_K_F5 126.1 115.82 82898 66315 81018 84953 77682 95509 97526 90281 93989 105600 89353 83218 104420 83136 90368 107390 102100 105270 76629 60871 82455 84397 81532 95629 97065 93003 95870 105210 92524 85518 105400 87097 92881 107350 97598 99997 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 311410000 9385 1072;3439 8870 17873;17874;17875 14345;14346 14345 633 2 9606 Homo sapiens -0.10133619861903753 GADIMYTGTVDCWR Unmodified 1643.7072 0.70721216 3439;1072 A0A0S2Z3H3;P12235;A8K787;A0A0S2Z3C4;P12236;Q6I9V5;Q59EI9 SLC25A4;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 0 0 6 0.816 1 1 1 56.688 56.752 2 6.118299999999999E-22 16731 20230619_1886_Aki_TMTPro18x_K_F6 277.96 266.75 104170 87949 108720 108120 82572 114850 116390 125010 135450 141320 116180 117510 151010 125320 112570 156740 147200 153690 96379 80679 109710 107660 88932 115790 116030 127380 136240 141220 121610 120660 151220 130720 117300 156700 140550 145990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 352970000 9386 1072;3439 8870 17876;17877;17878 14347;14348 14348 2 9606 Homo sapiens -0.08889315999272185 GADINAEEAPK Unmodified 1113.5302 0.53021729 3951 Q16566;B2R747 CAMK4 Calcium/calmodulin-dependent protein kinase type IV yes no 0 0 0 2 0 1 41.034 41.11 2 1.9467E-08 10323 20230619_1881_Aki_TMTPro18x_K_F2 173.24 137.88 58388 36352 74837 62612 42068 42405 48810 50541 50213 73698 93490 88994 94438 74647 67188 42530 91065 79200 54035 33524 74061 60817 46390 44591 48992 51729 52852 73644 93852 89063 94998 75855 69967 45408 86818 74880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55041000 9387 3951 8871 17879 14349 14349 1 9606 Homo sapiens -0.02200660495577722 GADINAPDK Unmodified 899.43486 0.43486035 3673 P58546;Q69YG1 MTPN;DKFZp761E1322 Myotrophin yes no 0 0 0 3.5 0.5 1 1 40.065 40.115 2 0.0020431 9605 20230619_1883_Aki_TMTPro18x_K_F4 110.14 41.401 30182 16543 37186 38403 50407 59637 37942 49131 44088 35359 62507 70529 46327 52148 50768 28234 62618 66133 27905 15340 37399 37212 51000 58388 39223 50522 45228 37545 62614 69318 48090 53105 52073 30960 59823 62399 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135500000 9388 3673 8872 17880;17881 14350 14350 1 9606 Homo sapiens -0.01887968895960057 GADPGMPEPTVLSLLWG Oxidation (M) 1754.8549 0.85492225 4145 Q75MR5;Q9P0U1;B5MD00 TOM7;TOMM7 Mitochondrial import receptor subunit TOM7 homolog yes no 0 1 0 6 0.816 1 1 1 68.512 68.548 2 0.057272 21510 20230619_1887_Aki_TMTPro18x_K_F7 50.284 33.652 3989.1 3526.1 3790.5 4396.2 4413.3 6299.4 5968.5 6535.6 5078.2 3359.6 4218.7 4269.9 4760.8 2839.7 4996.7 4774.2 3822.5 4089.7 3688.9 3234.6 3883.7 4392.8 4584.4 6224.9 5899.4 6572 5182.2 3592.5 4395.8 4251.1 4843.4 3082.2 5010.9 4728.8 3670.6 3890.7 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30132000 9389 4145 8873 17882;17883;17884 14351 14351 2674 1 9606 Homo sapiens 0.007688988063819124 GADPGMPEPTVLSLLWG Unmodified 1738.86 0.86000763 4145 Q75MR5;Q9P0U1;B5MD00 TOM7;TOMM7 Mitochondrial import receptor subunit TOM7 homolog yes no 0 0 0 6.5 1.12 1 1 1 1 69.384 69.416 2 0.059087 21833 20230619_1887_Aki_TMTPro18x_K_F7 68.551 59.229 5251.2 4524.5 6496.4 7030.8 5697.6 4763.6 7635.7 7084.6 9028.7 5695.8 5045.1 6606.7 6571.3 6163.9 7254.2 5878.6 5455.9 5659.2 4866.7 4161.2 6486.3 6864.3 6018.1 5043.5 7625.8 7045.1 8951.3 5837.3 5439.2 6705.4 6694.4 6325.9 7257.5 5905.9 5239 5376.7 2 2 2 2 2 2 2 2 2 2 2 3 2 2 2 2 2 2 43679000 9390 4145 8873 17885;17886;17887;17888 14352 14352 1 9606 Homo sapiens 0.020132026690134808 GADQKPTSADCAVR Unmodified 1474.6834 0.68344025 458 A8K5G0;A0A024R7K0;M0R2Z9;Q8IX01-4;Q8IX01-3;Q8IX01;M0R3F6;B4DSQ4 SFRS14;SUGP2 SURP and G-patch domain-containing protein 2 yes no 0 0 1 4.5 0.5 1 1 34.193 34.262 3 1.5673E-06 7261 20230619_1885_Aki_TMTPro18x_K_F5 121.99 118.65 59403 35207 62803 71531 89938 92336 83173 89265 87113 72950 79107 81388 89335 77264 74725 48643 106830 86030 54860 32558 63976 69450 91014 91661 84374 90935 88195 74877 82002 82029 90197 78381 77848 51534 101760 81392 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86992000 9391 458 8874 17889;17890 14353 14353 1 9606 Homo sapiens -0.034914134414293585 GADSELSTVPSVTK Unmodified 1389.6987 0.69873919 3589 P46087;P46087-4;P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 4.5 0.5 1 1 49.353 49.408 3 7.8409E-07 13520 20230619_1885_Aki_TMTPro18x_K_F5 129.71 105.42 65348 58528 61387 65292 69900 81148 71997 71012 97628 73185 76350 78463 80951 70334 74780 90958 78325 90284 60431 53629 62847 65600 72074 80626 73241 73302 97092 74074 79548 79170 82203 73900 76441 90984 74989 85715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 414670000 9392 3589 8875 17891;17892 14354 14354 1 9606 Homo sapiens 0.019477766273894304 GADYMDCLYR Unmodified 1262.506 0.50599315 964 Q13617-2;Q13617;A0A0A0MTN0;A0A8I5QJI3;A0A8I5KYP8;A0A140VKB1;A0A8I5KUA9;A0A8I5KQQ5;Q5T2B5;A0A8I5KU22;A0A0D9SET6;A0A8I5KYZ8;A0A8I5KXB2;A0A8I5KPX0;A0A8I5KS98;A0A8I5KTY5;A0A8I5KVE2;A0A8I5QKN3;A0A8I5KWB8;A0A8I5KV54;A0A8I5KYM7 CUL2 Cullin-2 yes no 0 0 0 4 0 1 51.255 51.282 2 0.001153 14600 20230619_1883_Aki_TMTPro18x_K_F4 111.61 86.831 56642 46824 57378 60689 52255 64715 61116 60147 74170 81084 78586 80165 79268 70764 68224 90559 92198 96636 52385 42980 58178 60197 54990 65012 61528 62325 75039 80792 80449 81102 80404 74354 71018 90951 88013 91705 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46574000 9393 964 8876 17893 14355 14355 1 9606 Homo sapiens -0.11475960245115857 GAEAANVTGPGGVPVQGSK Unmodified 1694.8588 0.85876208 3745 P67809;H0Y449;Q6PKI6;Q7KZ24 YBX1 Nuclease-sensitive element-binding protein 1 yes no 0 0 0 6.33 0.471 2 1 44.825 44.913 3;4 1.4845E-14 11628 20230619_1886_Aki_TMTPro18x_K_F6 152.66 135.77 870050 691550 811340 881410 901310 1012100 1059600 983140 1066900 1090500 1121700 1157600 1291600 1013400 1060500 1323100 1270000 1187100 803920 634760 831020 876190 933330 1012700 1059200 1009400 1089100 1098300 1155900 1167600 1301500 1066600 1095500 1316200 1212600 1129200 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 4930600000 9394 3745 8877 17894;17895;17896 14356;14357;14358;14359;14360 14356 5 9606 Homo sapiens 0.03912704624463004 GAEADQIIEYLK Unmodified 1348.6874 0.68744622 1746 A0A8C8MUD1;Q12904;Q12904-2;B4DNK3;A0A804HJ47;A0A5F9ZHC5;D6R937 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 0 0 4 0 1 62.335 62.34 2 0.0057458 19336 20230619_1883_Aki_TMTPro18x_K_F4 81.625 53.226 21195 15119 19969 20021 18477 20614 21929 19685 22558 25243 24913 28381 29178 24338 27273 29641 29707 30704 19574 13890 20366 19824 19404 20778 21932 20333 23058 25304 25665 28522 29551 25521 27914 29754 28407 29148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9967400 9395 1746 8878 17897 14361 14361 1 9606 Homo sapiens 0.027049993239415926 GAEEEEEEEEEEEEELQVVQVSEK Unmodified 2834.1989 0.19889772 4691 Q9UNS1-2;Q9UNS1 TIMELESS Protein timeless homolog yes no 0 0 0 1 0 1 60.274 60.274 3 1.8729E-26 18620 20230619_1880_Aki_TMTPro18x_K_F1 183.65 180.6 10036 5909.6 6513.1 8731.8 6812.7 9093 9002.6 6555.4 10415 9218.5 8095.8 9411.3 11179 9355.5 8841.2 11176 9092.9 9599.8 9236.5 5440.6 6929.9 8582.1 7134.5 9103.3 8983.9 6954.4 10440 9188.5 8558.9 9540.3 11200 9746.7 9058.3 11107 8701.1 9132.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14310000 9396 4691 8879 17898 14362 14362 1 9606 Homo sapiens -0.14483376905263867 GAEEEPPPPLQAVLVADSFDRR Unmodified 2392.2023 0.20228822 1528 Q13144;A0A3B3IUB1;A0A3B3IRP4;A0A3B3ISX3;A0A3B3ISM8;A0A3B3IUF2;A0A3B3IS56;A0A3B3ISS1;A0A3B3ITQ2;C9JRD9;A0A3B3IT53;H7C2X0 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes no 0 0 1 3 0.816 1 1 1 61.628 61.642 3 3.0155999999999996E-67 19090 20230619_1882_Aki_TMTPro18x_K_F3 293.63 269.59 133120 117110 136310 147570 131500 155700 146210 140010 158470 156190 163450 154820 175760 151080 152450 181120 169760 186460 123180 107440 138210 146610 137440 156450 146980 144600 160970 156970 167940 157190 177900 157580 156550 181740 162370 176980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 206800000 9397 1528 8880 17899;17900;17901 14363;14364;14365 14364 3 9606 Homo sapiens 0.06187516821864847 GAEEMETVIPVDVMR 2 Oxidation (M) 1706.7855 0.78552206 4402 V9HWC2;Q99497;K7ELW0 HEL-S-67p;PARK7 Protein deglycase DJ-1 yes no 0 2 0 1.5 0.5 1 1 49.038 49.071 3 0.00049367 13994 20230619_1881_Aki_TMTPro18x_K_F2 81.632 67.969 149940 120440 141360 168380 156600 171090 171890 146790 204560 190360 186260 169570 182110 184920 186210 210120 224310 222650 138560 110650 144710 166050 161910 172230 173350 152910 205810 189550 191710 173690 186460 191500 191510 211380 214240 211350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 332310000 9398 4402 8881 17902;17903 14366 14366 2762;2763 1 9606 Homo sapiens -0.03959928204699281 GAEEMETVIPVDVMR Oxidation (M) 1690.7906 0.79060744 4402 V9HWC2;Q99497;K7ELW0 HEL-S-67p;PARK7 Protein deglycase DJ-1 yes no 0 1 0 1.5 0.5 1 1 54.977 54.987 2 3.0464E-10 16563 20230619_1881_Aki_TMTPro18x_K_F2 155.98 139.72 52636 41300 51153 61434 50469 52919 61478 59574 59420 64005 69831 67100 68238 56806 68099 74569 66777 70890 48647 37976 52140 60250 52731 54300 61296 60546 61076 64516 71084 67662 69669 59874 69216 74426 63933 67356 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107540000 9399 4402 8881 17904;17905 14367 14367 2762;2763 1 9606 Homo sapiens -0.027156243420904502 GAEEMETVIPVDVMR Unmodified 1674.7957 0.79569281 4402 V9HWC2;Q99497;K7ELW0 HEL-S-67p;PARK7 Protein deglycase DJ-1 yes no 0 0 0 3 0.816 2 2 2 61.252 61.268 2;3 1.4045E-20 18841 20230619_1883_Aki_TMTPro18x_K_F4 218.54 182.16 163100 106100 169230 169870 130800 161040 163980 162180 177150 193240 202290 216390 221670 200500 194220 225440 219420 260990 150670 97731 170840 166140 139900 163430 163930 166500 180800 194310 207310 218060 224400 208670 199550 228040 209980 247360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1752199999.9999998 9400 4402 8881 17906;17907;17908;17909;17910;17911 14368;14369;14370 14370 3 9606 Homo sapiens -0.014713204794816193 GAEGILAPQPPPPQQHQERPGAAAIGSAR Unmodified 2900.5005 0.50053593 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;Q8WWM7-7 ATXN2L Ataxin-2-like protein yes no 0 0 1 7.5 0.5 1 1 41.685 41.719 4 4.5266E-21 10166 20230619_1888_Aki_TMTPro18x_K_F8 165.46 152.78 11782 11244 13106 12376 13602 14668 13940 12481 15229 12868 13737 15106 14839 14520 14663 13401 13532 16481 10916 10300 13206 12440 14091 14613 14075 12918 15378 13061 14226 15207 15113 14933 14845 13664 12979 15611 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84938000 9401 4285 8882 17912;17913 14371;14372 14372 2 9606 Homo sapiens 0.126305680673795 GAEIEYAMAYSK Unmodified 1331.6068 0.60675306 4314 Q969H8;M0QXF7;M0QYN0 MYDGF Myeloid-derived growth factor yes no 0 0 0 6 0 1 55.912 55.986 3 1.5822E-05 16438 20230619_1886_Aki_TMTPro18x_K_F6 128.85 105.73 350840 296690 338460 361930 327370 382510 360970 374750 435110 407870 376650 428680 466390 366460 435490 466610 435030 439830 324390 272140 344840 360450 342120 385030 364380 384260 436900 411100 393550 432020 471490 385440 443510 465730 416270 418020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 194390000 9402 4314 8883 17914 14373;14374 14374 2 9606 Homo sapiens -0.04578604990615531 GAEILADTFK Unmodified 1063.555 0.55497548 2229 B2R644;O94760;B4E3V1;B4DYP1;B4DGT0;O94760-2 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 5.5 0.5 1 1 58.627 58.688 3 0.00035834 17563 20230619_1886_Aki_TMTPro18x_K_F6 109.83 52.045 99028 86693 101360 74366 56444 55314 96757 90216 93077 93237 98488 84809 104630 80334 94602 102170 103440 94825 91626 79276 101930 76066 63163 58287 95162 89851 95218 93769 100980 86407 106050 84210 96899 101890 98829 90175 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169730000 9403 2229 8884 17915;17916 14375 14375 1 9606 Homo sapiens 0.025740193777892273 GAEIVADTFR Unmodified 1077.5455 0.54547343 3364 V9HW53;O95865;H0Y7N1;A0A140T971;Q5SSV3;Q5SRR8 HEL-S-277;DDAH2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes no 0 0 0 4 0.816 1 1 1 50.86 50.912 2 6.9802E-07 14154 20230619_1885_Aki_TMTPro18x_K_F5 144.77 94.73 211590 153670 173740 207620 212430 265690 236810 223420 280430 258480 267400 285470 259110 242310 264470 266350 278980 313270 195230 141190 180490 205880 218630 263160 238600 232120 282650 260260 274770 287000 265130 252610 269660 269900 267030 296920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 441560000 9404 3364 8885 17917;17918;17919 14376;14377 14377 2 9606 Homo sapiens 0.009802510922781948 GAEPETGSAVSAAQCQGPTR Unmodified 1972.8909 0.89086684 4664 Q9UI10-3;Q9UI10-2;Q71US4;B4DUP5;Q59FC8 EIF2B4 Translation initiation factor eIF-2B subunit delta yes no 0 0 0 3 0 1 37.624 37.677 3 2.2013E-22 8641 20230619_1882_Aki_TMTPro18x_K_F3 176.85 166.2 15954 12545 16550 11686 12967 11705 13018 14383 16322 17169 22226 21168 21898 19063 19643 18396 21533 21972 14753 11483 16672 11898 13737 11914 13246 14578 16673 17320 22502 21238 22252 19700 20111 18704 20587 20829 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76614000 9405 4664 8886 17920 14378 14378 1 9606 Homo sapiens -0.05666295754690509 GAEPETGSAVSAAQCQVGPTR Unmodified 2071.9593 0.95928076 2898 E7ERK9;Q9UI10;Q9HBP7;F8W8L6 EIF2B4 Translation initiation factor eIF-2B subunit delta yes no 0 0 0 3.5 0.5 1 1 41.205 41.255 3 4.2262E-55 10064 20230619_1883_Aki_TMTPro18x_K_F4 202.94 193.36 51905 41877 52775 56403 56142 66049 63144 60213 68013 61482 68798 71814 77984 58766 69219 70645 87136 77962 47997 38458 53622 55880 58261 65901 63409 61964 69029 62392 70976 71997 78850 61718 71529 71207 83134 74005 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 229890000 9406 2898 8887 17921;17922 14379;14380 14380 2 9606 Homo sapiens -0.03382051174867229 GAEQLAEGGR Unmodified 986.47812 0.47812215 3813 Q08J23-2;Q08J23;Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 0 0 0 1.5 0.5 1 1 34.899 34.927 2 0.00022705 7648 20230619_1881_Aki_TMTPro18x_K_F2 149.27 122.89 198500 131290 188620 215090 229690 243520 218500 222400 273310 249560 275130 273370 291950 234520 224580 214750 303800 263950 183260 120950 193190 210540 235060 243510 222670 229390 275380 251550 282820 274980 294180 242290 233830 218950 289630 250330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 214580000 9407 3813 8888 17923;17924 14381;14382 14382 2 9606 Homo sapiens -0.015657791186526993 GAESPFEEK Unmodified 992.44509 0.44509068 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 2 0.816 1 1 1 44.916 44.968 2 0.00071492 12110 20230619_1881_Aki_TMTPro18x_K_F2 141.2 90.318 526290 323360 332270 445360 458450 460680 474290 470610 547220 474690 605960 664890 598930 569970 662780 595340 718480 659920 484400 297400 356200 439720 466870 464930 479430 480360 555310 485410 619260 663080 614990 592060 675490 601770 686490 626320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 590480000 9408 630 8889 17925;17926;17927 14383;14384;14385 14384 3 9606 Homo sapiens -0.051434059613711725 GAFASLSELHCDK Unmodified 1433.6609 0.66091389 2797 CON__Q3SX09 yes yes 0 0 0 6.5 0.5 1 1 50.542 50.621 3 3.7504999999999996E-36 14135 20230619_1886_Aki_TMTPro18x_K_F6 227.06 168.31 + 250650 353680 422860 511030 740710 944340 613620 626700 760890 747420 1140500 1832100 791670 1078300 1226300 888600 1352500 2457300 234130 324540 420830 508130 741550 914130 630670 665650 781180 781590 1142400 1781900 842540 1126900 1244800 984320 1300500 2313300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2706900000 9409 2797 8890 17928;17929 14386;14387 14386 2 9606 Homo sapiens -0.03857012839057461 GAFCDLVWSDPEDVDTWAISPR Unmodified 2535.1376 0.13763905 494 A0A024R861;O00743-2;O00743;O00743-3;B7Z3E2 PPP6C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 65.054 65.081 3 5.3049E-18 20197 20230619_1885_Aki_TMTPro18x_K_F5 168.27 162.61 6783.9 5891.2 6909.5 7885.6 4888.5 7581.2 9449 8917.3 8461.8 7480.6 6635.9 8271.3 7669.2 9059.6 9382.1 8570.5 10467 9456.2 6276.2 5408.4 6989.6 7795.5 5371 7711.9 9229.3 8982 8600 7662.4 6958.4 8384 7896.7 9282.8 9564.6 8674.3 9997.3 8975.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35584000 9410 494 8891 17930;17931 14388 14388 1 9606 Homo sapiens -0.06852426046498294 GAFCEVRPDDK Unmodified 1292.5819 0.58193529 3279 O60502-4;O60502;B3KMK2;O60502-2 MGEA5 Protein O-GlcNAcase yes no 0 0 1 4 0 1 41.585 41.628 3 0.004411 10243 20230619_1883_Aki_TMTPro18x_K_F4 61.375 38.496 86469 52539 61624 81400 62934 82762 66331 77652 85960 77636 84607 106310 97043 88146 61278 115760 124910 113330 79637 48390 64810 79784 65568 83395 67328 79687 86396 79343 87507 106000 97068 92926 66747 115570 118810 107710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52834000 9411 3279 8892 17932 14389 14389 1 9606 Homo sapiens -0.05265240073322275 GAFGEATLYR Unmodified 1083.5349 0.53490874 391 A0A024R6D1;A0A7I2V5R1;Q8TD19;G3V5V0;G3V459;G3V2Z5 NEK9 Serine/threonine-protein kinase Nek9 yes no 0 0 0 7 0 1 48.117 48.204 2 0.00023251 12776 20230619_1887_Aki_TMTPro18x_K_F7 136.21 115.65 115860 101510 115980 126500 132610 157990 133880 131580 161730 114910 124890 129090 122260 118210 149560 140100 142240 135220 107180 93119 118140 126080 136590 156720 135750 135820 161580 117580 129860 130090 126280 123360 151140 140210 136120 128510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52117000 9412 391 8893 17933 14390 14390 1 9606 Homo sapiens -0.003517315621365924 GAFGEVAVVK Unmodified 975.53893 0.53893149 405;938 H0YLY0;A0A024R6N2;Q9Y5S2;Q86XZ8;Q8IWQ7;B9EGA7;A0A0A0MRJ0;A0A0A0MRJ1;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-2;Q5VT25-6 CDC42BPB;CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK beta;Serine/threonine-protein kinase MRCK alpha no no 0 0 0 7 0 1 52.607 52.677 3 0.0015411 14770 20230619_1887_Aki_TMTPro18x_K_F7 89.247 48.26 50288 40198 47357 54182 58454 65327 59662 58288 72099 60205 62139 60526 61547 58454 65345 73845 64760 67886 46470 36918 48564 53692 59899 65037 60452 60084 72323 60791 64203 61399 63063 61143 66399 73605 61989 64530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53557000 9413 405;938 8894 17934 14391 14391 1 9606 Homo sapiens 0.05018357931567152 GAFGKPQGTVAR Unmodified 1187.6411 0.64110515 3513 X1WI28;X5D2T3;P27635;F8W7C6;H7C123;H7C2C5;Q96L21 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like yes no 0 0 1 4 0.816 1 1 1 38.192 38.255 3 0.00013711 8888 20230619_1883_Aki_TMTPro18x_K_F4 110.98 88.444 1221300 958170 1059400 1152200 1372600 1441500 1373400 1311600 1443400 1364500 1334700 1194600 1443800 1089900 1204800 1438100 1368300 1010000 1127800 879020 1094900 1151400 1400700 1433000 1386500 1350100 1462600 1371200 1378300 1217700 1457900 1146200 1239500 1415100 1305100 965150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4684500000 9414 3513 8895 17935;17936;17937 14392;14393;14394 14393 3 9606 Homo sapiens 0.05479024003170707 GAFIQLLR Unmodified 916.54944 0.54943659 3869 Q5T0F3;Q13823;B4DPI9;H0YG10 GNL2 Nucleolar GTP-binding protein 2 yes no 0 0 0 5 0 1 59.105 59.159 2 0.016108 17542 20230619_1885_Aki_TMTPro18x_K_F5 102.8 27.532 114920 99400 111000 122630 95910 119820 114130 110050 121600 121960 123030 112260 130630 108580 124340 140160 124610 131710 106280 91179 112940 121890 101420 121130 114290 113460 123540 122340 126440 114370 132760 113810 126650 139820 119270 125160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92675000 9415 3869 8896 17938 14395 14395 1 9606 Homo sapiens 0.08782385376650836 GAFSEEYK Unmodified 929.41306 0.41306227 160 A0A024R1T5;P09543-2;P09543;K7ERC4;K7EN66;C9K0L8;K7ERZ0 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes no 0 0 0 3.5 0.5 1 1 45.148 45.192 2 2.0857E-05 11924 20230619_1882_Aki_TMTPro18x_K_F3 137.18 63.563 174210 142080 168010 186000 197680 234840 199560 201270 250040 234760 291730 289370 266810 232970 240680 275410 333750 312620 161040 130440 171770 184810 203260 232920 202690 208830 253400 237170 296200 289420 271980 244410 250510 278060 318290 296610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121010000 9416 160 8897 17939;17940 14396;14397 14396 2 9606 Homo sapiens -0.054467736445189985 GAFSPFGNIIDLSMDPPR Unmodified 1932.9404 0.94038322 1299 A0A1U9X839;A0A1U9X830;P18615;P18615-3;H9ZYJ1;A0A0A0MSN9;B7Z6T4;P18615-4 NELFE;NELF-E;RDBP Negative elongation factor E yes no 0 0 0 1.5 0.5 1 1 65.096 65.1 3 1.4264E-09 20852 20230619_1881_Aki_TMTPro18x_K_F2 131.48 91.37 10101 9036.6 6427.2 7744.9 8270 10519 8924.8 12011 11786 10184 10913 9347.9 12396 9415 11096 12055 12464 15561 9317.1 8262.8 6872.3 7973.3 8487.7 10462 9053 12103 11807 10365 11291 9543.3 12536 9863.2 11388 12262 11934 14731 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15763000 9417 1299 8898 17941;17942 14398;14399 14399 2 9606 Homo sapiens 0.011230639920540852 GAGFGPQHNR Unmodified 1039.4948 0.49477526 4015 Q56VL3 OCIAD2 OCIA domain-containing protein 2 yes yes 0 0 0 4 2.16 1 1 1 27.622 27.657 3 4.2578E-08 4970 20230619_1886_Aki_TMTPro18x_K_F6 192.14 170.63 31662 23075 31215 24584 41334 40412 35770 39442 42430 32059 33677 27764 41095 26965 27390 34520 45412 27571 29254 21151 31851 24939 41952 39657 36600 40125 42488 32683 35232 28393 41023 28272 29117 34162 43152 26326 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 32800000 9418 4015 8899 17943;17944;17945 14400;14401;14402 14402 3 9606 Homo sapiens -0.023392334420577754 GAGGQGQLDVR Unmodified 1056.5312 0.53122035 3886 Q14315;Q14315-2 FLNC Filamin-C yes no 0 0 0 4 0 1 34.322 34.372 2 0.0023211 7280 20230619_1883_Aki_TMTPro18x_K_F4 100.58 70.744 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9419 3886 8900 17946 14403 14403 1 9606 Homo sapiens 0.0052159866399961174 GAGNCPECGTPLRK Unmodified 1515.6922 0.6922308 381 A0A024R669;A0A024R688;P51948-2;P51948 MNAT1 CDK-activating kinase assembly factor MAT1 yes no 0 0 1 8 0 1 36.735 36.722 3 3.1584E-05 8134 20230619_1888_Aki_TMTPro18x_K_F8 109.84 95.047 32205 25662 26912 35771 35608 40681 38599 28648 45158 33278 47466 39965 48056 42732 34915 49572 56224 40961 29734 23577 27970 35323 36408 40479 38912 30267 45661 33642 48546 40427 48437 44320 36986 49186 53484 39052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23565000 9420 381 8901 17947 14404 14404 1 9606 Homo sapiens -0.04498763076571777 GAGNNPEFEETRR Unmodified 1475.6753 0.6753184 2759 C9JRJ5;Q9UGP4 LIMD1 LIM domain-containing protein 1 yes no 0 0 1 2 0 1 31.466 31.529 3 0.083497 6311 20230619_1881_Aki_TMTPro18x_K_F2 34.386 25.967 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9421 2759 8902 17948 14405 14405 1 9606 Homo sapiens -0.04349224366546878 GAGQQQSQEMMEVDR 2 Oxidation (M) 1724.7094 0.709397 1237 A0A140VK83;Q15435;Q15435-3;C9JRC4;B5MBZ8 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes no 0 2 0 1 0 1 29.935 29.935 3 0.0038415 5958 20230619_1880_Aki_TMTPro18x_K_F1 68.972 50.608 3428.8 2217 4030.1 4330.9 7071.5 4956.6 4777.3 4792.5 5446.4 4207.2 6281.3 7377 5891.5 4947.3 5409.7 5422.2 5447.6 6725.2 3170.9 2048 4087.5 4204.4 7019.3 4965 4971.1 4893.7 5540.1 4380 6395.3 7260.2 6000.7 5207.7 5512.1 5514.5 5220.7 6369.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15823000 9422 1237 8903 17949 14406 14406 778;779 1 9606 Homo sapiens -0.12396932052138254 GAGQQQSQEMMEVDR Unmodified 1692.7196 0.71956776 1237 A0A140VK83;Q15435;Q15435-3;C9JRC4;B5MBZ8 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 0 2 0 1 39.891 39.961 3 0.045536 9784 20230619_1881_Aki_TMTPro18x_K_F2 53.395 42.134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9423 1237 8903 17950 14407 14407 1 9606 Homo sapiens -0.09908324326897855 GAGQQQSQEMMEVDRR Unmodified 1848.8207 0.82067879 1237 A0A140VK83;Q15435;Q15435-3;C9JRC4;B5MBZ8 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 1 3 0 1 35.807 35.864 3 5.8508E-06 7921 20230619_1882_Aki_TMTPro18x_K_F3 91.207 81.285 14914 11620 13178 13000 15091 16683 16843 16308 19850 17523 19402 19951 17492 15150 20055 16762 19516 19930 13773 10653 13560 13070 15578 16584 16970 16717 20024 17719 19854 19973 18036 15874 20300 17007 18681 18894 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10443000 9424 1237 8904 17951 14408 14408 1 9606 Homo sapiens -0.06977872624202064 GAGSEETAAAAAPSR Unmodified 1344.627 0.62697123 1341 A0A590UJ60;A0A5F9UJV3;A0A2R8Y2A8;A0A590UKC4;Q68CN5;Q13367;Q13367-4;A0A590UJW5;A0A590UJU7;A0A590UJU0;A0A590UK04;Q13367-3;A0A590UKD3 DKFZp686D17136;AP3B2 AP-3 complex subunit beta-2 yes no 0 0 0 2 0 1 32.377 32.437 2 5.5655E-10 6675 20230619_1881_Aki_TMTPro18x_K_F2 150.49 129.71 24388 15414 31105 23792 9036 10109 17382 17637 20644 31022 49250 53258 43201 44225 41554 22249 55304 55128 22570 14193 30654 23179 11343 11434 17206 17888 21972 31282 48942 52682 44250 44758 42930 24621 52781 52013 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29910000 9425 1341 8905 17952 14409 14409 1 9606 Homo sapiens -0.031557180064282875 GAGSVFR Unmodified 692.36057 0.36057319 3734 P62917;E9PKZ0;G3V1A1;B4DVG7;E9PKU4;E9PP36 RPL8 60S ribosomal protein L8 yes no 0 0 0 4.83 2.54 1 1 1 1 1 1 36.588 36.633 2 0.006381 8591 20230619_1880_Aki_TMTPro18x_K_F1 133.47 56.095 841050 637340 708350 763830 878170 984780 891450 908400 1135300 825470 818420 819300 1020000 760900 714060 1037100 1116300 914730 776320 584750 733550 763910 899920 977220 905270 930830 1129600 839230 863070 830660 1020000 801760 755350 1029900 1062800 870850 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1704499999.9999998 9426 3734 8906 17953;17954;17955;17956;17957;17958 14410;14411 14410 2 9606 Homo sapiens 0.002087328031848301 GAGTDDSTLVR Unmodified 1090.5255 0.52546627 2493 B4DT77;B4DWU2;B4DHY4;Q53HM8;P20073-2;P20073;B2R7L2;B2R657 ANXA7 Annexin;Annexin A7 yes no 0 0 0 1.5 0.5 1 1 36.065 36.122 2 3.7383E-17 8106 20230619_1881_Aki_TMTPro18x_K_F2 280.03 235.34 121330 82048 110630 118870 136280 140210 155710 148630 187320 142920 176540 169350 178370 145290 149030 127950 205180 176150 111980 75468 113720 117280 140020 140330 156770 151110 188410 145630 181630 169880 180600 149840 155020 131640 195570 166910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177520000 9427 2493 8907 17959;17960 14412;14413 14413 2 9606 Homo sapiens -0.01617544638338586 GAGTGGLGLAVEGPSEAK Unmodified 1569.7999 0.79985021 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 0 0 5 0.816 1 1 1 51.421 51.481 3 9.6083E-14 14552 20230619_1886_Aki_TMTPro18x_K_F6 153.22 108.11 366970 347990 385940 392380 461660 514050 471290 461840 513880 480490 508080 495730 500510 418570 542520 481130 435580 430270 339810 318830 391700 394300 473750 509430 475930 475840 520860 485130 521320 499950 512840 437550 544690 479940 417760 409240 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1069699999.9999999 9428 3484 8908 17961;17962;17963 14414;14415;14416 14416 3 9606 Homo sapiens 0.03774228330121332 GAGWLFGAK Unmodified 905.47594 0.4759373 494 A0A024R861;O00743-2;O00743;O00743-3;B7Z3E2 PPP6C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 59.799 59.826 3 0.0046808 18255 20230619_1883_Aki_TMTPro18x_K_F4 73.26 25.657 71814 66434 80188 82856 76195 83252 78271 88283 85127 72562 72724 59101 69076 61273 80628 82424 78449 71507 66522 60932 80709 82347 79486 84269 79067 89397 85818 73778 74983 60785 71190 64240 81673 81875 75032 68058 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29031000 9429 494 8909 17964;17965 14417;14418 14417 2 9606 Homo sapiens 0.01941836934179264 GAGWTGHVAGTR Unmodified 1168.5738 0.57375386 3925 V9HWJ5;Q15274 HEL-S-90n;QPRT Nicotinate-nucleotide pyrophosphorylase [carboxylating] yes no 0 0 0 1.5 0.5 1 1 33.799 33.828 3 2.8059E-08 7497 20230619_1880_Aki_TMTPro18x_K_F1 168.98 133.27 80715 64492 83921 89791 83745 101260 98164 92930 133310 95600 117590 121800 115940 100240 112390 103980 138720 124710 74648 59251 85036 88722 87503 101290 99198 95620 133020 97357 121340 121710 118260 104310 115740 105630 132380 118280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99180000 9430 3925 8910 17966;17967 14419;14420 14419 2 9606 Homo sapiens -0.0037900620777691074 GAHVTINAR Unmodified 937.50936 0.50936269 2457;2620 Q59FH4;H0Y5J4;B4DDU5;Q9UJU6-5;Q9UJU6;B4DKZ4;B4DNX5;B4DXL9;Q9UJU6-2;Q9UJU6-3 DBNL Drebrin-like protein no no 0 0 0 8 0 1 29.284 29.305 3 6.3038E-09 5397 20230619_1888_Aki_TMTPro18x_K_F8 209.84 161.08 21638 8354.8 21054 22232 25184 23101 22824 23768 22583 20376 27343 28520 19994 22242 20442 18984 28318 25185 19938 7786.6 21498 21298 25728 23293 23155 24150 23193 21017 27517 28359 20702 22956 21204 19486 26996 23866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19801000 9431 2457;2620 8911 17968 14421 14421 1 9606 Homo sapiens 0.03810838706078812 GAHYCVPCYENK Unmodified 1496.6177 0.61766887 3866 Q96C98;Q9P100;Q13643 FHL3 Four and a half LIM domains protein 3 yes no 0 0 0 7 0 1 41.197 41.268 3 0.00017373 9783 20230619_1887_Aki_TMTPro18x_K_F7 101.39 94.813 30420 14407 31967 27537 32921 35940 51491 47942 53761 47943 48797 47669 58261 38913 42743 62918 46728 53210 28066 13327 32352 26847 34594 35950 50877 48128 54421 48435 50694 48153 58353 41733 44073 62231 44716 50618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35433000 9432 3866 8912 17969 14422 14422 1 9606 Homo sapiens -0.1107752588798121 GAIDHYVTPVK Unmodified 1198.6346 0.63462279 4616 Q9NX20;E9PI14 MRPL16 39S ribosomal protein L16, mitochondrial yes no 0 0 0 7.5 0.5 1 1 44.375 44.426 3 9.7175E-05 11252 20230619_1888_Aki_TMTPro18x_K_F8 120.06 102.83 275390 207240 262720 294020 347450 366110 353800 355980 439060 371660 401490 349600 412390 313990 333450 378850 412400 383850 254420 190480 269420 290630 354360 364440 358880 364670 440790 374260 413710 354920 416610 328720 345060 379830 393620 364640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 270090000 9433 4616 8913 17970;17971 14423;14424 14424 2 9606 Homo sapiens 0.043250860517900946 GAIETYQEVASLPDVPADLLK Unmodified 2228.1576 0.15762944 3822 Q12797;Q12797-10;B8Y0L3 ASPH Aspartyl/asparaginyl beta-hydroxylase yes no 0 0 0 6 0 1 64.35 64.397 3 0.00050263 20085 20230619_1886_Aki_TMTPro18x_K_F6 76.704 53.605 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9434 3822 8914 17972 14425 14425 1 9606 Homo sapiens 0.09267692955836537 GAIEVLIR Unmodified 869.53345 0.53345218 3611 P49756;P49756-2;P49756-3;E9PQU5 RBM25 RNA-binding protein 25 yes no 0 0 0 7.5 0.5 1 1 52.988 53.061 2 0.0054401 14957 20230619_1887_Aki_TMTPro18x_K_F7 113.5 52.739 317410 260110 279630 321010 264460 318140 324470 329350 365800 332080 345520 343090 360540 315460 331290 363760 358630 362750 293210 238640 287270 319150 277830 322120 324990 335810 369410 335850 356110 346930 366180 328830 339080 364650 342900 344540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 210050000 9435 3611 8915 17973;17974 14426;14427 14426 2 9606 Homo sapiens 0.09346679139764547 GAIILAK Unmodified 684.45341 0.45341094 3457 P15880;Q6IPX5;Q3KQT6;Q8N5L9;H0YEN5;Q8J014;E9PM36;I3L404;E9PMM9;E9PPT0;Q8NI61 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 yes no 0 0 0 2.5 0.5 2 2 50.135 50.198 2;3 0.010382 14177 20230619_1882_Aki_TMTPro18x_K_F3 126.05 67.385 1004100 769040 852650 880320 1015000 983550 1045000 1018800 1212800 1178200 1025900 955420 1296300 990750 822290 1388300 1273700 1092700 926920 705250 881210 881610 1041700 988130 1056900 1042400 1219500 1175600 1072100 982020 1291700 1042100 872460 1370500 1213100 1041600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3856899999.9999995 9436 3457 8916 17975;17976;17977;17978 14428;14429 14429 2 9606 Homo sapiens 0.0985623753656455 GAILSEEELAAMSPTAAAVAK Unmodified 2029.0402 0.04015684 3440 P12270;P12270-2;Q58F23;Q504U6;A0PJC9 TPR Nucleoprotein TPR yes no 0 0 0 5.5 0.5 1 1 62.387 62.436 3 9.2943E-23 19205 20230619_1886_Aki_TMTPro18x_K_F6 180.88 156.33 223400 167470 250230 248350 174290 176180 167710 203020 180180 230280 235200 209920 238170 180760 228080 234670 239200 196730 206670 154010 250700 243210 186680 184250 170270 206310 185290 230470 238700 213140 242320 190330 232740 232850 228460 187410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 762090000 9437 3440 8917 17979;17980 14430;14431 14431 2 9606 Homo sapiens 0.06679836815351337 GAILSEEELAAMSPTAAAVAK Oxidation (M) 2045.0351 0.035071462 3440 P12270;P12270-2;Q58F23;Q504U6;A0PJC9 TPR Nucleoprotein TPR yes no 0 1 0 5 0 1 58.862 58.916 3 1.5197E-11 17452 20230619_1885_Aki_TMTPro18x_K_F5 133.16 123.24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9438 3440 8917 17981 14432 14432 2068 1 9606 Homo sapiens 0.054355329527425056 GAILTGPPGTGK Unmodified 1067.5975 0.597509 1777 D3DUJ0;A0A8I5KVV1;Q8TA92;Q9Y4W6;A0A8I5KYF5 AFG3L2 AFG3-like protein 2 yes no 0 0 0 2 0 1 47.833 47.904 2 1.0917E-17 13470 20230619_1881_Aki_TMTPro18x_K_F2 188.99 151.43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9439 1777 8918 17982 14433 14433 1 9606 Homo sapiens 0.06641414506043475 GAIVFNATSEFCR Unmodified 1470.6925 0.69254837 3252 O43290;B4DDH9 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 0 8 0 1 56.361 56.417 3 0.02351 16350 20230619_1888_Aki_TMTPro18x_K_F8 55.899 44.748 26657 24085 29414 28750 28133 36459 30510 29289 44191 30029 29265 32618 30920 29825 33361 32570 29923 33729 24687 22082 29634 28753 29447 36106 31039 30441 43610 30430 30830 32891 31648 30987 33688 32758 28690 32010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12319000 9440 3252 8919 17983 14434 14434 1 9606 Homo sapiens -0.023970200850953916 GAIYYFK Unmodified 860.44324 0.44324019 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9;Q8N3X5;O14983-2;O14983;Q7Z675;Q7Z6E5;O14983-3 ATP2A2;ATP2A1;DKFZp779O2152;DKFZp779G2251 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Calcium-transporting ATPase yes no 0 0 0 3.5 0.5 1 1 55.001 55.03 2 0.033678 16393 20230619_1882_Aki_TMTPro18x_K_F3 102.12 41.971 139230 120620 128250 145640 143390 164100 165260 150610 207300 157100 157170 149000 164580 138980 151630 208360 191560 186820 128710 110620 131560 145250 148460 164230 166560 155010 206660 158310 163890 151460 167200 147350 156930 206870 182870 177690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155240000 9441 1076 8920 17984;17985 14435 14435 1 9606 Homo sapiens 0.007436298113361772 GALAEAR Unmodified 686.37114 0.37113788 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9 VCL;HEL114 Vinculin yes no 0 0 0 3 0.816 1 1 1 32.254 32.32 2 0.019978 6423 20230619_1882_Aki_TMTPro18x_K_F3 105.2 48.098 54174 29754 67249 71676 131540 148280 110030 140050 134930 57300 75819 78013 61255 58649 84460 34071 77111 64278 50091 27609 68250 69848 130980 143790 112920 141250 133440 63078 79999 77590 64145 59839 84780 36503 73762 60778 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42411000 9442 51 8921 17986;17987;17988 14436 14436 1 9606 Homo sapiens 0.01540715457610986 GALAETGAGAK Unmodified 944.49271 0.49270958 1800 A0A8Q3SIP9;A0A8Q3WKG3;P82675;A0A8Q3SHY8;A0A8Q3WKL2;B4DIW8;P82675-2 MRPS5 28S ribosomal protein S5, mitochondrial yes no 0 0 0 5 0 1 40.283 40.373 2 4.0284E-07 9683 20230619_1885_Aki_TMTPro18x_K_F5 168.83 109.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9443 1800 8922 17989 14437 14437 1 9606 Homo sapiens 0.01824293029483215 GALALAQAVQR Unmodified 1096.6353 0.63529149 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 50.136 50.191 2 8.6438E-07 14199 20230619_1882_Aki_TMTPro18x_K_F3 168.08 145.04 597100 500330 525970 534680 525180 683070 557030 575430 719000 344130 359770 291220 305890 265880 493380 367710 368020 286790 551660 458380 540340 539260 547720 676830 564690 589050 707700 359390 383590 297770 322950 280380 490770 363790 352770 273550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 526250000 9444 2973 8923 17990;17991 14438;14439 14438 2 9606 Homo sapiens 0.0908392549151813 GALALEEK Unmodified 829.45453 0.45453316 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 0 3.5 0.5 1 1 47.066 47.127 3 0.0035901 12868 20230619_1882_Aki_TMTPro18x_K_F3 95.531 31.965 45496 38023 38768 42772 46110 48477 52427 51737 65407 61678 66049 64008 66778 52072 51647 64636 66166 62030 42023 34851 40080 42895 47497 48679 52881 52886 65912 61873 67729 64473 67389 54788 53656 64570 63138 58959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198420000 9445 148 8924 17992;17993 14440 14440 1 9606 Homo sapiens 0.03298407114800739 GALAYYK Unmodified 784.41194 0.41194006 2097 Q6PD62;A8K6X9;H0YCE8 CTR9 RNA polymerase-associated protein CTR9 homolog yes no 0 0 0 3 0 1 51.054 51.125 2 0.071638 14628 20230619_1882_Aki_TMTPro18x_K_F3 71.995 35.8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9446 2097 8925 17994 14441 14441 1 9606 Homo sapiens 0.011110567772334434 GALCHLELK Unmodified 1039.5485 0.54845032 3361 O95801 TTC4 Tetratricopeptide repeat protein 4 yes yes 0 0 0 8 0 1 46.876 46.925 3 0.00055504 12255 20230619_1888_Aki_TMTPro18x_K_F8 110.87 71.567 103270 77766 90554 103080 101400 110090 101900 99933 122070 115530 107060 105980 120810 96021 114780 124430 117380 117010 95350 71425 93277 102080 104530 110550 103330 103220 122670 115660 111160 107700 122530 100910 117020 124140 112280 111210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57902000 9447 3361 8926 17995 14442 14442 1 9606 Homo sapiens 0.030258029454444113 GALDSITK Unmodified 803.43888 0.43888309 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;A0A7I2V3I5;A0A7I2V2T9;Q8TAS6 LAMB1 Laminin subunit beta-1 yes no 0 0 0 6.5 0.5 1 1 46.877 46.962 2 0.014812 12601 20230619_1886_Aki_TMTPro18x_K_F6 101.54 47.385 133440 103050 139070 143080 146500 161860 158860 149730 190370 161750 164850 139200 187370 119940 155040 198130 198210 168620 123390 94686 140950 141420 151930 161940 160410 154140 191090 162210 171120 141880 188780 128660 160830 196040 189020 160580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87820000 9448 3015 8927 17996;17997 14443 14443 1 9606 Homo sapiens 0.02930120597750374 GALETDNSNSSAQVSTVGQTSR Unmodified 2208.0254 0.025446067 159 H0Y720;A0A024R1T4;Q9UPQ9-1;Q9UPQ9 TNRC6B Trinucleotide repeat-containing gene 6B protein yes no 0 0 0 3.5 0.5 1 1 40.232 40.282 3 5.0993E-09 9670 20230619_1883_Aki_TMTPro18x_K_F4 90.884 86.763 10458 8611.4 11887 11004 12407 14055 15369 13962 14656 12921 15510 16403 17610 12319 13453 15103 16547 22410 9681.9 7903.4 11963 10960 12918 13976 15299 14245 14997 13220 15968 16356 17691 13013 13935 15532 15843 21186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28210000 9449 159 8928 17998;17999 14444 14444 1 9606 Homo sapiens -0.03024563799090174 GALFGANANR Unmodified 989.50428 0.50427732 3556 Q53Y06;P36543;P36543-3;P36543-2 ATP6V1E1 V-type proton ATPase subunit E 1 yes no 0 0 0 2.5 0.5 1 1 42.044 42.123 2 5.18E-07 10534 20230619_1882_Aki_TMTPro18x_K_F3 170.87 135.51 196130 134890 155750 185990 159920 199840 197010 170120 256310 174770 164740 161620 171080 140630 194210 182000 205390 162490 180870 123990 161860 183710 167150 200250 198150 176090 253860 176200 173660 163990 175550 147950 197610 181190 196110 154690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123710000 9450 3556 8929 18000;18001 14445;14446 14446 2 9606 Homo sapiens 0.009105348434673033 GALFGANANRK Unmodified 1117.5992 0.59924033 3556 Q53Y06;P36543;P36543-3;P36543-2 ATP6V1E1 V-type proton ATPase subunit E 1 yes no 0 0 1 5 0.816 1 1 1 40.234 40.309 3 5.0122E-05 9641 20230619_1885_Aki_TMTPro18x_K_F5 133.32 111.24 441240 401980 415910 377290 515210 465320 440730 450930 504030 290960 311860 235800 253420 210350 455110 302740 314900 228300 408100 367780 425680 384650 524610 464040 450650 457280 501640 301320 326380 241540 270030 222660 450630 299090 302050 217950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 338230000 9451 3556 8930 18002;18003;18004 14447;14448 14447 2 9606 Homo sapiens 0.045144683146418174 GALFQAHAR Unmodified 969.51445 0.51444807 805 E9KL42;A0A087WT95;Q86TX2;P49753;G3V4F2;B7ZMC1;B4DV16;A1L172 ACOT2;ACOT1 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial yes no 0 0 0 2.5 0.5 1 1 35.337 35.394 3 4.6125E-07 7814 20230619_1881_Aki_TMTPro18x_K_F2 167.24 121.52 52825 39661 46388 48246 63516 66123 66596 63476 79341 34345 38902 36983 42505 35698 41016 51122 41150 39191 48771 36395 47933 48257 64698 65445 67302 64247 78347 36441 41970 37459 43215 37660 41798 50429 39357 37357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97545000 9452 805 8931 18005;18006 14449 14449 1 9606 Homo sapiens 0.02847142568691652 GALHTVSHEDIR Unmodified 1333.6739 0.67386184 1362 A0A2R8Y7R9;Q13136;Q13136-2;H0YDW2;Q59FZ5;H0YD72 PPFIA1 Liprin-alpha-1 yes no 0 0 0 3.5 0.5 1 1 31.075 31.15 4 7.5412E-06 5961 20230619_1883_Aki_TMTPro18x_K_F4 140.78 122.97 19994 13754 27985 25254 33242 31144 30298 31338 27097 25324 37788 40440 32974 33530 34331 20279 44771 39816 18531 12690 27821 24627 33953 31044 30642 31841 28192 26368 38084 40104 33911 34109 35378 21737 42702 37628 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39663000 9453 1362 8932 18007;18008 14450 14450 1 9606 Homo sapiens 0.020371863353830122 GALINVPPPFLGLPR Unmodified 1559.9188 0.91878356 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A140T936;A0A1U9X9C1 VARS Valine--tRNA ligase yes no 0 0 0 6.5 0.5 1 1 63.662 63.701 3 2.8098E-08 19769 20230619_1886_Aki_TMTPro18x_K_F6 141.38 97.063 112800 103440 109450 117580 103380 120840 112530 124470 136480 139330 147720 137580 156460 131840 139200 162890 143720 160150 104360 94787 111420 117660 108200 122050 113750 127280 138160 139960 151330 139640 158570 137840 142250 162970 137580 152080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 414350000 9454 725 8933 18009;18010 14451 14451 1 9606 Homo sapiens 0.16122091816305328 GALLVFAEHR Unmodified 1111.6138 0.61382777 4662 Q9UHL4;R4GNE8;Q59EM4;R4GN05 DPP7 Dipeptidyl peptidase 2 yes no 0 0 0 1 0 1 50.871 50.871 3 3.5538E-07 14715 20230619_1880_Aki_TMTPro18x_K_F1 175.91 148.58 18978 12327 18377 17130 13931 16617 17502 15679 17019 10849 11174 11984 10221 8821.9 14580 12445 12454 7350.3 17521 11335 18643 16899 14925 16813 17427 15967 17110 11266 11716 12012 10672 9384.3 14618 12173 11901 7054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25587000 9455 4662 8934 18011 14452 14452 1 9606 Homo sapiens 0.062485404627977914 GALNPADITVLFK Unmodified 1357.7606 0.76055158 3019 X6RLT1;H0UI80;Q8IXH7-4;Q8IXH7 NELFCD;TH1L Negative elongation factor C/D yes no 0 0 0 2.5 0.5 1 1 64.16 64.18 3 0.00011841 20471 20230619_1881_Aki_TMTPro18x_K_F2 80.469 59.567 21845 16534 20751 25070 17543 18684 21337 23585 25367 27669 27754 25720 26752 23806 29269 29422 30558 31433 20181 15209 21146 24525 18579 19485 21433 23867 25719 27675 28314 26143 27463 24919 29791 29588 29231 29830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212770000 9456 3019 8935 18012;18013 14453 14453 1 9606 Homo sapiens 0.09598172837195307 GALPLDTVTFYK Unmodified 1323.7075 0.70745338 3526 V9HW71;P30040;P30040-2 HEL-S-107;ERP29 Endoplasmic reticulum resident protein 29 yes no 0 0 0 1.5 0.5 1 1 62.058 62.063 2;3 1.4632E-06 19324 20230619_1880_Aki_TMTPro18x_K_F1 180.8 147.54 361530 323600 381260 353610 311860 353610 348820 356570 383930 497140 508600 546720 536370 446270 482680 571970 519470 607130 334650 296450 384410 354900 330450 357800 351010 367850 394620 496120 517420 549230 543870 470380 494330 574430 497280 575960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 678170000 9457 3526 8936 18014;18015 14454;14455 14454 2 9606 Homo sapiens 0.05854795054551687 GALQNIIPASTGAAK Unmodified 1410.7831 0.78307794 3382;4086 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q0QET7;A4UCT1;Q5ZEY3 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 3.26 0.909 2 13 2 1 1 61.77 61.832 2;3 6.963E-06 16360 20230619_1882_Aki_TMTPro18x_K_F3 149.96 131.8 220520 183840 207570 209220 204650 227970 231480 222950 266060 265450 255220 250340 275760 226670 266310 265490 264770 280780 203830 168520 211910 209390 213600 229040 232920 229250 268750 265550 263110 254000 280280 236750 270880 267040 253450 266460 11 11 11 10 11 11 11 11 11 11 10 11 11 11 11 11 11 11 137510000000 9458 3382;4086 8937 18016;18017;18018;18019;18020;18021;18022;18023;18024;18025;18026;18027;18028;18029;18030;18031;18032;18033;18034 14456;14457;14458;14459;14460;14461;14462;14463;14464;14465;14466;14467;14468;14469;14470;14471;14472 14457 17 9606 Homo sapiens 0.09411772234852833 GALQYLVPILTQTLTK Unmodified 1758.0291 0.029121869 3904 Q14974;B2RBR9;Q14974-2;B7Z752 KPNB1 Importin subunit beta-1 yes no 0 0 0 7.5 0.5 2 2 66.854 66.875 2;3 1.2195E-25 20660 20230619_1888_Aki_TMTPro18x_K_F8 174.59 161.97 125810 102090 114720 128580 92936 98873 116680 109860 107900 134340 144790 141860 147270 131820 117940 156210 149390 163390 116240 93684 117200 127300 98847 102520 116070 112220 111980 134620 146890 143370 148880 137580 122400 156870 142730 155060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 586820000 9459 3904 8938 18035;18036;18037;18038 14473;14474 14474 2 9606 Homo sapiens 0.18042847293986597 GALTGGYYDTR Unmodified 1172.5462 0.54620171 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 6 0.816 1 1 1 43.202 43.286 2 1.1228E-08 10888 20230619_1886_Aki_TMTPro18x_K_F6 182.16 151.84 231010 182860 244650 242520 229360 263370 257140 250510 249700 310190 350660 348270 356210 294500 287520 354500 376110 359330 213670 167920 247160 240290 240160 264400 257600 258450 259030 311310 355190 350050 360070 308750 298830 355360 358890 341310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 413910000 9460 4191 8939 18039;18040;18041 14475;14476 14475 2 9606 Homo sapiens -0.033169542586847456 GALTVGITNTVGSSISR Unmodified 1631.8842 0.88424855 3806 Q06210-2;Q06210;A0A6I8PRN4;A0A6I8PTT9 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 0 4 0 1 54.595 54.61 2 1.4059E-06 16052 20230619_1883_Aki_TMTPro18x_K_F4 146.96 78.675 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9461 3806 8940 18042 14477 14477 1 9606 Homo sapiens 0.09358179146875045 GALVLGSSLK Unmodified 943.57023 0.57023162 2221 G5E9W8;B4DSX6;C9JQ42;B2R5R5;P46976-3;P46976-2;P46976;Q8N5Y3 GYG1 Glycogenin-1 yes no 0 0 0 3 0 1 54.264 54.31 3 0.0010701 16090 20230619_1882_Aki_TMTPro18x_K_F3 93.111 65.098 39166 30500 42630 39143 43640 47784 39335 42906 59656 26427 27781 30201 33297 26940 32435 42642 35539 37051 36231 27999 43003 38939 45162 47545 40539 43723 58257 27777 30263 30424 33782 28721 33226 42251 33984 35245 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31421000 9462 2221 8941 18043 14478 14478 1 9606 Homo sapiens 0.09618930965655181 GALWAGVAGGGGGGPGAGAAELLK Unmodified 1993.0381 0.038123426 3223 O14813;H0YGU5 PHOX2A Paired mesoderm homeobox protein 2A yes no 0 0 0 2 0 1 62.484 62.493 3 1.0094E-26 19728 20230619_1881_Aki_TMTPro18x_K_F2 188.56 170.19 155150 125910 144930 161490 116140 154760 177270 182290 179780 169470 194480 235280 176940 201240 224820 185230 229710 297820 143370 115560 147800 160100 124750 157540 175310 184020 183470 173910 198490 234540 183780 207770 227840 192810 220210 281430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 252940000 9463 3223 8942 18044 14479 14479 1 9606 Homo sapiens 0.08132588912462779 GAMPPAPVPAGTPAPPGPATMMPDGTLGLTPPTTER Unmodified 3450.6986 0.69856831 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7I2V4K9 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 1 0 1 62.516 62.516 4 3.2292E-17 19521 20230619_1880_Aki_TMTPro18x_K_F1 132.96 127.68 3084.7 3711.5 4731.9 5909 4494.4 3966.1 4399.1 4863.6 6585.3 7164.7 5042.4 5522 7149.9 5780 6305.6 6485.6 6582.1 6764.4 2873.3 3411 4671.7 5757.9 4676.1 4179.9 4510.4 4968.9 6534.2 7067.4 5341.7 5683.6 7189.1 5995.3 6442.7 6521.6 6296.3 6421.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87385000 9464 1112 8943 18045 14480 14480 1 9606 Homo sapiens 0.07124697037625083 GAMPPAPVPAGTPAPPGPATMMPDGTLGLTPPTTER 2 Oxidation (M) 3482.6884 0.68839756 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7I2V4K9 NONO Non-POU domain-containing octamer-binding protein yes no 0 2 0 7 0 1 59.809 59.855 4 0.017597 17774 20230619_1887_Aki_TMTPro18x_K_F7 42.571 30.605 12391 12947 16053 14592 9746.5 14438 12689 13904 11731 14851 17217 13623 18493 14908 18953 17760 14256 19832 11506 11858 15901 14608 10716 14594 12617 14266 12232 14916 17444 13951 18839 15498 19001 17920 13724 18795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16266000 9465 1112 8943 18046 14481 14481 688;689;690 1 9606 Homo sapiens 0.04636089312361946 GAMPPAPVPAGTPAPPGPATMMPDGTLGLTPPTTER Oxidation (M) 3466.6935 0.69348293 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7I2V4K9 NONO Non-POU domain-containing octamer-binding protein yes no 0 1 0 7.5 0.5 1 1 61.649 61.683 4 1.0191E-10 18400 20230619_1888_Aki_TMTPro18x_K_F8 109.09 98.188 82667 62701 77382 91056 69769 88372 95155 90026 92505 74515 70889 85539 106400 90827 85320 80389 97681 100870 76364 57646 79041 89552 73823 89540 94369 91490 93509 76516 75418 86472 106480 92995 87775 82127 93363 95579 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 228300000 9466 1112 8943 18047;18048 14482 14482 688;689;690 1 9606 Homo sapiens 0.058803931749935145 GAMSTQQIK Oxidation (M) 978.48043 0.48043033 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 1 0 7 0 1 35.311 35.382 3 3.984E-05 7458 20230619_1887_Aki_TMTPro18x_K_F7 124.98 39.772 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9467 1637 8944 18049 14483 14483 1060 1 9606 Homo sapiens -0.009670667051977944 GAMSTQQIK Unmodified 962.48552 0.48551571 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 8 0 1 40.531 40.523 2 1.0119E-05 9696 20230619_1888_Aki_TMTPro18x_K_F8 193.41 122.03 66515 34694 76535 62780 80442 110140 70200 83193 98323 20669 26171 20230 26640 24964 59900 22002 40516 18228 61442 32048 76904 61674 83172 107030 72256 85113 95446 24400 30297 20801 28796 25422 59033 22077 38799 17434 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22664000 9468 1637 8944 18050 14484 14484 1 9606 Homo sapiens 0.002772371574110366 GAMTSSMER Unmodified 968.40555 0.40555083 923 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;Q9Y655;A0A087WUT0;A0A024R5Q6;A0A0C4DGV1;H0YN19;Q9P2K5-3 MYEF2 Myelin expression factor 2 yes no 0 0 0 4 0 1 34.201 34.252 2 1.7359E-08 7218 20230619_1883_Aki_TMTPro18x_K_F4 211.79 183.68 54126 43437 52957 51765 41370 44400 50774 46804 59856 41745 40153 38796 47135 37630 43782 41383 50200 39817 50034 39842 53705 51520 44143 45526 50932 47547 59629 42408 42428 39488 47725 39067 44913 41453 47897 37873 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34813000 9469 923 8945 18051 14485 14485 1 9606 Homo sapiens -0.07991572508092304 GANAVGYTNYPDNVVFK Unmodified 1827.8792 0.87916317 332 A0A024R5C5;P11498 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 8 0 1 56.713 56.77 3 5.567E-07 16459 20230619_1888_Aki_TMTPro18x_K_F8 118.21 104.81 79747 62497 80504 91341 67029 74323 71940 74044 73449 115580 128820 116280 119780 97049 107700 127980 116450 134670 73726 57455 81563 89615 70813 76433 72401 76807 77084 114510 129070 117410 121900 102420 110330 128420 111460 127770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189860000 9470 332 8946 18052 14486 14486 1 9606 Homo sapiens -0.0016612471576991084 GANDFMCDEMER 2 Oxidation (M) 1505.5221 0.5221135 3470 P17987;E7ERF2;E7EQR6;F5H282;F5GZ03 TCP1 T-complex protein 1 subunit alpha yes no 0 2 0 1 0 1 36.612 36.612 2 0.013815 8618 20230619_1880_Aki_TMTPro18x_K_F1 70.321 70.321 72381 60183 65202 74078 86319 75283 77646 76550 72372 88065 89128 76511 85868 66742 78232 104450 79979 83785 66880 55211 67175 73685 87588 76128 78649 78425 74793 87988 90432 77957 87324 71170 79935 103120 76533 79784 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108940000 9471 3470 8947 18053 14487 14487 2111;2112 1 9606 Homo sapiens -0.2104266686117171 GANDFMCDEMER Oxidation (M) 1489.5272 0.52719888 3470 P17987;E7ERF2;E7EQR6;F5H282;F5GZ03 TCP1 T-complex protein 1 subunit alpha yes no 0 1 0 1.33 0.471 2 1 41.963 41.989 2 0.00039059 10742 20230619_1880_Aki_TMTPro18x_K_F1 105.2 98.514 233890 179570 199400 237010 217250 237120 233600 226990 235910 267300 264300 264740 295850 235750 235810 323850 296870 296450 215920 164900 205920 234570 224710 239540 234700 233730 241560 267840 271180 268000 298030 248840 244700 322220 283450 281860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 315510000 9472 3470 8947 18054;18055;18056 14488;14489 14488 2111;2112 2 9606 Homo sapiens -0.1979836299856288 GANDFMCDEMER Unmodified 1473.5323 0.53228426 3470 P17987;E7ERF2;E7EQR6;F5H282;F5GZ03 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 1.5 0.5 1 1 48.37 48.405 2 5.1210000000000005E-31 13683 20230619_1880_Aki_TMTPro18x_K_F1 269.34 268.43 383960 335820 374470 368910 272640 394180 387620 380950 412000 484040 411740 428770 509670 404410 419170 538630 530420 522810 355120 307690 379750 370360 295060 396260 385060 392820 418830 481880 426850 436960 512700 425260 434620 537850 506370 496760 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 461550000 9473 3470 8947 18057;18058 14490;14491;14492 14490 3 9606 Homo sapiens -0.18554059135954049 GANESLER Unmodified 874.41446 0.41445926 3949 Q16352;Q59EM6 INA Alpha-internexin yes no 0 0 0 1 0 1 30.297 30.297 2 0.001075 6124 20230619_1880_Aki_TMTPro18x_K_F1 149.57 84.32 35412 14505 52816 37004 9973.5 10830 15223 18712 11764 26977 45632 55663 36814 41236 48871 14629 60620 56871 32776 13501 51436 35186 13838 13094 15074 18850 13535 27641 44931 54615 38487 41605 49932 17607 57862 53583 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29754000 9474 3949 8948 18059 14493 14493 1 9606 Homo sapiens -0.027771395557579126 GANPVEIR Unmodified 854.46102 0.46101552 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;A0A7I2V2X6;B7Z4F6;A0A7I2YQK6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;Q53SE2;E7ESH4;E7EXB4;A0A0S2Z415;P10809-2;B9VP19;B9VPB4;B9VP24 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 5 1.41 1 1 1 1 1 37.188 37.253 2 0.0023852 8330 20230619_1885_Aki_TMTPro18x_K_F5 127.56 76.599 1702700 1366200 1453500 1686900 2007400 2051700 2021000 1978100 2537800 1974400 2162500 2080700 2221700 1924900 1861800 2367600 2273400 2225000 1572300 1253500 1507000 1681800 2041600 2045700 2051900 2025600 2539600 2000200 2237900 2103400 2249300 2013700 1925100 2362700 2170900 2115000 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 7133499999.999999 9475 272 8949 18060;18061;18062;18063;18064 14494;14495;14496;14497 14496 4 9606 Homo sapiens 0.027963450661900424 GANQWIK Unmodified 815.42899 0.42898711 699 P08559-4;P08559-2;P08559;Q5JPU2;P08559-3;A0A024RBX9;Q53GE3;A5YPB6;A5PHJ9;Q36750 PDHA1;PDHA1/LOC79064 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha yes no 0 0 0 1.5 0.5 1 1 46.498 46.538 2 0.0052937 12966 20230619_1880_Aki_TMTPro18x_K_F1 141.98 64.236 59419 51975 63605 62570 72749 82017 81500 75317 94906 67011 70685 63148 70165 54014 70078 65230 83259 68835 54999 47662 64410 62583 75085 81299 82038 77182 94870 68110 73600 64006 71612 56652 71953 65590 79434 65395 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137530000 9476 699 8950 18065;18066 14498 14498 1 9606 Homo sapiens 0.01388977383044221 GANRTETVTSFR Unmodified 1337.6688 0.66877646 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 7.5 0.5 1 1 33.127 33.17 3 8.1408E-07 6766 20230619_1888_Aki_TMTPro18x_K_F8 147.71 98.965 62484 79109 68426 52966 91237 60314 68754 71634 62718 60181 69115 47323 61945 43899 67590 70040 70850 47443 58020 72151 69203 55902 91996 60908 70487 72057 64518 61020 70175 48643 63659 46795 68817 68696 67595 45387 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41966000 9477 3758 8951 18067;18068 14499;14500 14500 2 9606 Homo sapiens 0.013448824727674946 GAPAAATAPAPTAHK Unmodified 1330.6993 0.69934831 4293;1866 Q92522;A0A994J4R3 H1FX Histone H1x no no 0 0 0 7.5 0.5 1 1 35.503 35.533 3 1.3425E-33 7663 20230619_1888_Aki_TMTPro18x_K_F8 259.1 235.02 205080 119730 202610 213760 213120 218540 218700 226980 231340 169820 236190 225700 227380 201830 200450 120950 243420 215350 189270 110510 206220 208080 220540 220700 220670 229830 234860 176460 241630 225700 231120 204790 206200 128440 232290 203640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1656599999.9999998 9478 4293;1866 8952 18069;18070 14501;14502 14502 2 9606 Homo sapiens 0.04722660857760275 GAPAVVISQGR Unmodified 1053.5931 0.59309232 2811 O14531;D3DRG7 DPYSL4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 1 0 1 41.022 41.022 2 3.3366E-05 10534 20230619_1880_Aki_TMTPro18x_K_F1 143.7 143.7 170700 139090 169140 178680 215990 219650 207270 180770 224620 199740 221900 219580 214200 193070 187280 216920 224970 215870 157830 127670 172690 177680 220260 218150 209960 187950 227690 201550 227430 221130 217680 201230 193160 217480 214820 205080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149360000 9479 2811 8953 18071 14503 14503 1 9606 Homo sapiens 0.06843950083157324 GAPEGVIDR Unmodified 912.46649 0.46649483 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9;Q8N3X5;O14983-2;O14983;Q7Z675;Q7Z6E5;O14983-3 ATP2A2;ATP2A1;DKFZp779O2152;DKFZp779G2251 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Calcium-transporting ATPase yes no 0 0 0 2.5 0.5 1 1 37.399 37.456 2 0.00037491 8587 20230619_1882_Aki_TMTPro18x_K_F3 138.06 81.516 243340 192470 214670 235620 269100 246130 250270 256460 303200 269550 286970 313080 346380 274500 267110 349560 373970 316540 224740 176590 221330 234570 274450 248490 255080 261640 305270 273080 297900 314610 347850 288400 279320 347990 356380 301210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 496580000 9480 1076 8954 18072;18073 14504;14505 14505 2 9606 Homo sapiens 0.006760238579886391 GAPFNVTEK Unmodified 961.4869 0.48689592 4737 Q9Y4C8;A0A024RBL4 RBM19 Probable RNA-binding protein 19 yes no 0 0 0 6.5 0.5 1 1 47.824 47.908 2 0.00028681 12605 20230619_1887_Aki_TMTPro18x_K_F7 141.2 67.579 77471 62599 67669 77422 86481 94624 79852 80089 101610 96505 97120 92826 108080 88706 84874 116590 106480 97274 71554 57437 69893 77174 88217 94051 81564 83251 102140 96580 100280 94318 108860 93102 88079 115550 101600 92630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88937000 9481 4737 8955 18074;18075 14506 14506 1 9606 Homo sapiens 0.0046119451779986775 GAPGAGLGPR Unmodified 851.46135 0.46134987 4788 yes yes 0 0 0 7 0 2 34.066 34.147 2 0.00095112 6950 20230619_1887_Aki_TMTPro18x_K_F7 114.72 1.2217 + 92317 60121 85776 78371 97672 115330 96253 103080 138050 49413 51070 32181 37817 33306 73658 43502 58059 30177 85204 55244 87821 78140 100630 113480 98374 104660 134500 52477 55844 33609 40767 34849 73230 42911 55509 28905 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64372000 9482 4788 8956 18076;18077 14507 14507 1 9606 Homo sapiens 0.029677647860467005 GAPGNCVGAEQALAR Unmodified 1469.7045 0.70451004 1315 A0A1W2PPD9;V9H1L1;Q9H224 yes no 0 0 0 5 0 1 40.681 40.768 3 0.00053452 9854 20230619_1885_Aki_TMTPro18x_K_F5 85.006 71.87 49709 37204 56250 55820 72791 69342 57568 66660 68011 53700 69908 76735 66505 63844 68637 58654 86026 74774 45990 34220 56821 55004 73801 69032 59292 67917 68727 55681 71545 76399 68153 65979 70653 59970 82063 70891 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82319000 9483 1315 8957 18078 14508 14508 1 9606 Homo sapiens -0.011554033418860854 GAPGQPGTILR Unmodified 1065.5931 0.59309232 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 1 0 1 40.722 40.722 2 0.00020391 10415 20230619_1880_Aki_TMTPro18x_K_F1 128.91 78.004 157660 121980 143380 149010 164090 193430 173520 168720 179180 183170 205230 187270 180400 148780 161920 183760 205980 182840 145630 111920 147210 148840 169160 191630 174600 174440 183250 184450 208110 188670 184020 156610 167520 183990 196490 173750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159320000 9484 1331 8958 18079 14509 14509 1 9606 Homo sapiens 0.06291950083118536 GAPIETLGYHSASNR Unmodified 1571.7692 0.76921879 4074 Q5VT52-3;Q5VT52;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes no 0 0 0 7 0 1 40.355 40.423 3 3.9372E-14 9436 20230619_1887_Aki_TMTPro18x_K_F7 181.08 164.7 38382 33183 38385 37945 46286 50301 43483 48154 57487 46757 56686 55762 58182 44771 45755 53316 56939 61815 35503 30416 39108 38105 47394 49882 44450 49281 57702 47619 58235 55844 58718 47027 47405 53891 54404 58604 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62970000 9485 4074 8959 18080 14510 14510 1 9606 Homo sapiens 0.006204947357673518 GAPLVVICQGK Unmodified 1140.6325 0.6325143 1217 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;B4DLZ4 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 2 0 1 52.56 52.593 3 0.00060524 15580 20230619_1881_Aki_TMTPro18x_K_F2 94.692 70.841 123310 92511 114280 121280 109980 157240 116340 116920 142160 149910 135570 121290 157780 113850 110700 167260 143620 116690 113900 84959 116860 120530 115100 155240 117760 123090 143220 148910 140220 124270 157980 120550 115510 164230 136910 111470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124900000 9486 1217 8960 18081 14511 14511 1 9606 Homo sapiens 0.0678233404232742 GAPPSSNIEDFHGLLPK Unmodified 1777.8999 0.89989861 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991;H0Y8T4 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 0 7.5 0.5 2 2 55.19 55.253 3;4 3.1906E-14 15768 20230619_1888_Aki_TMTPro18x_K_F8 167.05 134.32 316440 250970 273830 268700 245560 302120 289880 307130 303860 305030 299340 264340 314530 261970 296430 335170 268950 305180 292230 229980 281280 270530 258830 303100 290280 313260 308660 307130 307810 270360 319570 274220 300470 333860 257840 290040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2830300000 9487 1059 8961 18082;18083;18084;18085 14512;14513;14514 14514 3 9606 Homo sapiens 0.04206465663946801 GAPQHYPK Unmodified 896.45045 0.45045083 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;H0YCH5;H0YEC5;H0YD77;H0YCF8;H0YDC0;H0YEN8;H0YD99 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 8 0 1 32.327 32.332 3 0.01026 6458 20230619_1888_Aki_TMTPro18x_K_F8 75.189 51.633 73393 46657 86263 94726 124330 134880 97731 128050 115760 77258 120730 130190 113110 106630 112250 63257 135710 120830 67869 43130 87175 92139 125390 133070 100730 129830 116940 82447 123370 128900 115720 108480 115160 67670 129520 114210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47242000 9488 3752 8962 18086 14515 14515 1 9606 Homo sapiens -0.0019163758825015975 GAPSFVR Unmodified 732.39187 0.39187332 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;C9IZE1 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 1.5 0.5 1 1 39.061 39.094 2 0.0075742 9667 20230619_1880_Aki_TMTPro18x_K_F1 124.12 16.977 658370 543450 584030 687390 733420 759050 741820 715460 863310 673840 655720 635620 720660 548440 719450 760490 752720 627250 608240 498710 602310 683140 750110 761210 750920 732910 864040 682450 685420 644410 733110 579950 733610 753300 719000 597640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 719120000 9489 4468 8963 18087;18088 14516;14517 14516 2 9606 Homo sapiens 0.014973058372902415 GAPTLPPAWQPFLK Acetyl (Protein N-term) 1563.8449 0.84494991 978 B7Z7B9;E7CU85;A0A0B4J1S3;A0A7L8XZM3;H3BLT4;O15392-7;O15392-6;O15392-5;O15392-4;O15392-3;O15392;O15392-2 BIRC5 Baculoviral IAP repeat-containing protein 5 yes no 1 0 0 2.5 0.5 1 1 66.074 66.096 2 0.00011772 20989 20230619_1882_Aki_TMTPro18x_K_F3 82.287 51.717 8984.6 8450.3 8761 9311.8 5979.1 9510.2 8474.1 8272 8466.4 11269 11734 7015.8 11077 10492 8241.7 9464.3 7405.2 7373.1 8313.9 7740.8 8883.1 9337.9 6519.5 9569.6 8406.6 8616.2 8763.5 11100 11821 7446.3 11193 10651 8391.7 9410.5 7093.1 7025.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27388000 9490 978 8964 18089;18090 14518 14518 1 9606 Homo sapiens 0.08558123653983785 GAPTTSLISVAVTK Unmodified 1343.766 0.76603089 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GW82;A0A1B0GUA1;A0A1B0GTJ4;A0A1B0GV49;A0A0J9YWF7;A0A1B0GUY0;H0YHM6;A0A1B0GVU0 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 3 0 1 57.288 57.321 3 9.236E-09 17302 20230619_1882_Aki_TMTPro18x_K_F3 155.66 133.19 125970 111500 114080 122470 122010 127170 131160 130030 143310 140980 145480 133830 155310 133880 137710 150550 149560 163990 116450 102160 117030 122900 126320 128370 132110 132940 145430 141690 149510 136250 157370 139010 141070 151740 143090 155560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 671860000 9491 1415 8965 18091 14519 14519 1 9606 Homo sapiens 0.10789851629033365 GAPYNALTGK Unmodified 990.51345 0.51344502 4687 Q9UMX5 NENF Neudesin yes yes 0 0 0 1.5 0.5 1 1 47.434 47.472 2 4.6545E-05 13268 20230619_1881_Aki_TMTPro18x_K_F2 170.69 126.24 156220 142590 141620 168310 166620 182250 174300 165730 180780 196530 239160 258090 223500 188420 192320 255820 249360 251990 144440 130710 145620 168020 171300 182900 175530 171350 186140 198770 242040 256870 227140 200160 199610 255580 238050 239370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190750000 9492 4687 8966 18092;18093 14520;14521 14521 2 9606 Homo sapiens 0.01780883409139733 GAQAAIVVYDITNTDTFAR Unmodified 2025.0167 0.016719282 164 A0A024R1U4;P51148;P51148-2;K7ERI8;K7ERQ8;F8VVK3;K7ENY4 RAB5C Ras-related protein Rab-5C yes no 0 0 0 7.5 0.5 1 1 62.804 62.834 3 3.3445E-10 19010 20230619_1888_Aki_TMTPro18x_K_F8 89.859 72.577 44987 35386 40330 45759 34621 37127 45519 43186 48429 60281 56242 65424 74761 60149 53982 73242 66727 86941 41552 32486 41304 45248 36703 38346 45364 44180 49557 60137 58194 65980 74707 62953 56073 74090 63860 82358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1789799999.9999998 9493 164 8967 18094;18095 14522 14522 1 9606 Homo sapiens 0.045211590929966405 GAQASSGSPALPR Unmodified 1197.6102 0.61019895 3582 P42684-5;P42684;P42684-3;P42684-6;P42684-2;P42684-10;P42684-7;P42684-4 ABL2 Abelson tyrosine-protein kinase 2 yes no 0 0 0 7 0 1 35.485 35.556 2 0.013251 7526 20230619_1887_Aki_TMTPro18x_K_F7 71.349 55.146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9494 3582 8968 18096 14523 14523 1 9606 Homo sapiens 0.01929825898287163 GAQGVILVYDVTR Unmodified 1389.7616 0.76161421 4557 Q9NP72;Q9NP72-2;B7Z5V3;B7Z4P9;A0A804HIB9;A0A8C8NLQ3;H0Y6T8;A0A804HKK5 RAB18 Ras-related protein Rab-18 yes no 0 0 0 8 0 1 57.821 57.873 2 1.1615E-10 16928 20230619_1888_Aki_TMTPro18x_K_F8 185.3 146.15 101960 76580 88713 94881 70395 91702 90429 79296 108520 103400 97462 116020 109690 95452 120170 119560 113440 141180 94126 70287 90992 94269 75277 92665 90573 82585 109100 103620 101220 116450 112070 100440 121650 120960 108790 133770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63326000 9495 4557 8969 18097 14524 14524 1 9606 Homo sapiens 0.08232387206112435 GAQPAPLLCSVLK Unmodified 1352.7486 0.74860669 808 Q53F69;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345;A0A087WTI9 LRRC41 Leucine-rich repeat-containing protein 41 yes no 0 0 0 2.5 0.5 1 1 60.001 60.022 3 9.8964E-05 18472 20230619_1882_Aki_TMTPro18x_K_F3 101.6 70.367 25222 17774 19110 23509 28400 31177 29551 27394 33738 20909 21814 20695 21829 19153 25201 23112 20516 23774 23255 16329 20092 23358 28812 30850 29831 28075 33619 21502 22947 20983 22443 20017 25298 23206 19697 22562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110360000 9496 808 8970 18098;18099 14525 14525 1 9606 Homo sapiens 0.0863423282239637 GAQQIHSIR Unmodified 1008.5465 0.54647648 459 A0A024R7K7;A0A024R7M6;Q86YP4-2;Q86YP4;Q86YP4-3;B4DKZ7 GATAD2A Transcriptional repressor p66-alpha yes no 0 0 0 7 0.816 1 1 1 29.209 29.263 3 5.3123E-07 5434 20230619_1888_Aki_TMTPro18x_K_F8 164.46 42.279 50635 32999 52586 55435 59507 61715 54066 62077 69954 61932 68469 66650 57937 50706 52314 46185 74597 60492 46776 30415 53367 54193 61107 61913 55353 63365 70282 62741 69830 66867 59229 52606 54482 47315 71061 57356 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 44742000 9497 459 8971 18100;18101;18102 14526;14527;14528 14528 3 9606 Homo sapiens 0.04254510251848842 GAQVEEIWSLEPENFEK Unmodified 2003.9476 0.94763666 2291 Q5LJB0;B2RB07;Q9Y5K5-2;Q9Y5K5-4;Q9Y5K5-3;Q9Y5K5;Q5LJA5;Q5LJA9 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes no 0 0 0 2 0 1 62.956 62.965 3 0.0002951 19927 20230619_1881_Aki_TMTPro18x_K_F2 78.848 65.907 34005 25054 26722 27474 26104 35696 28657 30388 33557 34749 28878 30259 32957 30509 35917 34114 31430 34215 31368 22970 27752 27662 27314 35339 28905 31513 33752 34755 30052 30919 33661 31649 36213 34239 30135 32486 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17930000 9498 2291 8972 18103 14529 14529 1 9606 Homo sapiens -0.014179249265453109 GAQYQPILR Unmodified 1044.5716 0.5716286 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;B3KVA0;K7ENW7 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 1.5 0.5 1 1 42.8 42.841 2 0.00012663 11346 20230619_1880_Aki_TMTPro18x_K_F1 151.29 117.2 228420 198610 241880 221270 227820 274750 247850 242660 279230 286110 266950 248420 292130 229610 227810 289580 270720 238170 211400 182000 244270 222410 238460 273040 249780 251230 282360 285710 275380 253320 294190 240690 235480 287000 258390 226880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174810000 9499 442 8973 18104;18105 14530;14531 14530 2 9606 Homo sapiens 0.05112565054423612 GARPPAAGPGGDEDEDEEDTAPESALDTSLDK Unmodified 3211.3913 0.39128338 1616 Q27J81;Q27J81-2;A0A6Q8PHA2;A0A6Q8PH71;A0A6Q8PHG2;A0A6Q8PGN3;A0A6Q8PF44;A0A6Q8PFW4;A0A0A0MQU1;A0A6Q8PHS8 INF2 Inverted formin-2 yes no 0 0 1 1.5 0.5 1 1 51.024 51.047 4 1.6666000000000002E-30 14770 20230619_1880_Aki_TMTPro18x_K_F1 188.44 182.84 17988 11916 16915 21309 14007 15849 16152 16286 14139 23529 22761 24870 22888 23085 19387 21673 22822 28312 16605 10992 17252 20657 14835 16440 16117 16814 14902 23412 22966 25103 23210 23792 19980 22169 21841 26800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120580000 9500 1616 8974 18106;18107 14532 14532 1 9606 Homo sapiens -0.1259566150529281 GASANWWNHR Unmodified 1197.5428 0.54278809 3363 O95864-3;O95864;O95864-4;O95864-2;E5RGZ5 FADS2 Fatty acid desaturase 2 yes no 0 0 0 3 0 1 40.25 40.306 3 3.7967E-06 9730 20230619_1882_Aki_TMTPro18x_K_F3 163.88 135.86 40978 35793 41123 42119 35608 34958 41317 44774 43255 51077 40300 43639 58829 44908 35513 67137 75165 46898 37908 32816 41677 41947 37535 36141 41415 45223 43918 51032 42298 44708 58364 47456 38871 65882 71338 44862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17864000 9501 3363 8975 18108 14533 14533 1 9606 Homo sapiens -0.04808159522031019 GASFVTSTNPR Unmodified 1135.5622 0.56218613 3615 P49916-3;P49916;P49916-4;P49916-2;K7ERZ5;K7ENR9;Q96DF0 LIG3 DNA ligase 3 yes no 0 0 0 8 0 1 39.173 39.16 2 8.3294E-09 9113 20230619_1888_Aki_TMTPro18x_K_F8 185.29 145.99 26708 22908 26665 25860 26487 31544 34923 32016 39334 29745 40114 33781 36146 29764 31561 37813 39474 35063 24703 20996 27094 25961 27770 31474 34849 32618 39791 30324 40897 34022 36799 31257 32644 37699 37662 33348 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16629000 9502 3615 8976 18109 14534 14534 1 9606 Homo sapiens -0.0001724802177704987 GASGPLVALPGAEK Unmodified 1265.698 0.69795133 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;H0Y9Y3;Q9UMS6;Q9UMS6-3 SYNPO2 Synaptopodin-2 yes no 0 0 0 8 0 1 53.725 53.797 3 0.052281 15181 20230619_1888_Aki_TMTPro18x_K_F8 52.527 37.837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9503 4686 8977 18110 14535 14535 1 9606 Homo sapiens 0.07573026769023272 GASGSFVVVQK Unmodified 1077.5819 0.58185894 4054 Q5SSJ5;Q5SSJ5-2;Q5SWC8;Q5SSJ5-3 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 2 0 1 48.572 48.637 2 3.1693E-09 13787 20230619_1881_Aki_TMTPro18x_K_F2 190.88 117.67 143940 117610 131240 148870 155650 176510 186420 185520 207330 172880 184730 191290 192170 178440 175310 201330 211330 219880 133000 107930 134890 148130 160630 176560 186760 188540 209010 176020 190980 192970 195250 185650 180700 202910 201910 208610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207390000 9504 4054 8978 18111 14536 14536 1 9606 Homo sapiens 0.0461712798901317 GASGTFQLK Unmodified 907.47633 0.47633123 4054 Q5SSJ5;Q5SSJ5-2;B0QZK4;Q5SSJ5-3 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 1.5 0.5 1 1 47.193 47.23 2 0.0001357 13180 20230619_1881_Aki_TMTPro18x_K_F2 149.82 92.769 148930 141970 140330 157320 160750 198350 205160 180500 217680 139380 175950 179120 166140 154190 172130 182690 231750 199290 137790 130050 143760 158170 166700 197010 204520 184610 219030 144440 182130 179300 170360 161310 178260 184030 220940 189230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 273260000 9505 4054 8979 18112;18113 14537 14537 1 9606 Homo sapiens 0.01889211863374385 GASGTREDPNLVPSISDK Unmodified 1841.9119 0.91191986 4101 Q6FHJ9 COX5B yes yes 0 0 1 7 0 1 44.966 45.051 3 0.0027628 11336 20230619_1887_Aki_TMTPro18x_K_F7 64.507 54.85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9506 4101 8980 18114 14538 14538 1 9606 Homo sapiens 0.02464037616459791 GASQAGMLAPGTR Unmodified 1215.603 0.60300508 3933 Q15417;Q15417-3;Q15417-2;E9PDU6 CNN3 Calponin-3;Calponin yes no 0 0 0 5.33 3.09 1 1 1 38.944 38.938 2 3.1593E-07 9027 20230619_1888_Aki_TMTPro18x_K_F8 147.71 128.93 144710 104130 129960 105600 99570 101230 85918 93251 112280 139440 162420 128640 159140 136200 112060 158660 170680 125090 133600 95415 132580 106590 105500 102620 88426 97046 114980 138110 163810 131480 160320 141380 118250 157080 162420 119340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 226850000 9507 3933 8981 18115;18116;18117 14539;14540;14541 14541 3 9606 Homo sapiens 0.0038277002618087863 GASQAGMLAPGTR Oxidation (M) 1231.5979 0.5979197 3933 Q15417;Q15417-3;Q15417-2;E9PDU6 CNN3 Calponin-3;Calponin yes no 0 1 0 7 0.816 1 1 1 34.419 34.457 2 0.00022886 7067 20230619_1887_Aki_TMTPro18x_K_F7 104.59 75.896 154450 110400 117670 116350 108530 107090 98912 90844 110290 137510 164420 132290 145350 126080 114100 154030 146050 118030 142420 101190 122390 116960 113220 108740 100750 95245 113950 136300 165040 134460 147480 131670 118550 152220 139240 112590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 247900000 9508 3933 8981 18118;18119;18120 14542;14543;14544 14543 2611 3 9606 Homo sapiens -0.008615338364506897 GASQAGMTGYGMPR Oxidation (M) 1398.602 0.6020188 1438 A0A384MTL2;P37802;P37802-2;C9J5W6;Q9UI15 TAGLN2;TAGLN3 Transgelin-2;Transgelin-3 yes no 0 1 0 6 2.92 1 1 2 37.105 37.115 2;3 0.00012502 7950 20230619_1887_Aki_TMTPro18x_K_F7 101.39 92.179 131910 101410 131080 140440 136100 136890 164800 166590 174950 181840 173660 169480 193830 149170 161080 205110 180960 182100 121920 93182 133370 138580 141610 139380 164810 168510 177690 182520 179080 171990 195530 157550 165720 203800 172960 173200 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 461500000 9509 1438 8982 18121;18122;18123;18124 14545;14546;14547;14548 14546 924;925 4 9606 Homo sapiens -0.08133812405003482 GASQAGMTGYGMPR Unmodified 1382.6071 0.60710418 1438 A0A384MTL2;P37802;P37802-2;C9J5W6;Q9UI15 TAGLN2;TAGLN3 Transgelin-2;Transgelin-3 yes no 0 0 0 3.67 3.09 1 1 1 42.411 42.438 2 5.2175E-16 11178 20230619_1880_Aki_TMTPro18x_K_F1 227.57 208.79 252850 194830 227250 241020 172790 210760 267190 271280 290390 349910 275180 275410 402230 250820 228150 386030 329110 302280 233530 178800 232300 239320 186520 216780 264680 274990 294390 346970 288420 282190 397670 267060 241480 380570 313730 288090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 369790000 9510 1438 8982 18125;18126;18127 14549;14550 14549 2 9606 Homo sapiens -0.06889508542394651 GASQAGMTGYGMPR 2 Oxidation (M) 1414.5969 0.59693343 1438 A0A384MTL2;P37802;P37802-2;C9J5W6;Q9UI15 TAGLN2;TAGLN3 Transgelin-2;Transgelin-3 yes no 0 2 0 6.82 1.11 2 2 3 4 32.198 32.245 2;3 0.00019293 6322 20230619_1885_Aki_TMTPro18x_K_F5 93.478 85.174 79459 61721 68104 72924 71376 68773 87206 90393 89868 93901 101660 88039 104860 76760 78080 107520 92660 88844 73364 56614 70202 72713 74236 70389 87107 90922 91883 94487 103760 89350 105560 81213 80837 106430 88489 84597 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 503520000 9511 1438 8982 18128;18129;18130;18131;18132;18133;18134;18135;18136;18137;18138 14551;14552;14553;14554;14555 14551 924;925 5 9606 Homo sapiens -0.09378116267612313 GASSPYGAPGTPR Unmodified 1216.5836 0.58364985 4071 Q5UIP0-2;Q5UIP0;H7BZN3;B4DRJ4 RIF1 Telomere-associated protein RIF1 yes no 0 0 0 7.5 0.5 1 1 36 36.067 2 1.7685E-05 7699 20230619_1887_Aki_TMTPro18x_K_F7 152.7 102.98 30552 23313 24754 27293 26750 27114 27945 27239 32950 34911 36731 30579 43072 30971 27126 38493 42046 30038 28194 21384 25669 27239 27662 27449 28266 28025 33454 34742 37721 31282 42972 32350 28744 38058 40002 28664 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34882000 9512 4071 8983 18139;18140 14556;14557 14556 2 9606 Homo sapiens -0.01597862993048693 GATLALTQVTPQDER Unmodified 1598.8264 0.82639932 245 B2R642;A8K6A6;A0A024R3I5;P43121;B3KXZ9 MCAM Cell surface glycoprotein MUC18 yes no 0 0 0 4.5 0.5 1 1 49.529 49.584 3 4.6598E-19 13564 20230619_1885_Aki_TMTPro18x_K_F5 209.41 183.54 61496 56356 69711 72801 54527 69175 68642 67662 83983 85518 85812 89427 91521 78867 83741 93819 80071 97718 56969 51709 69932 72122 58285 70170 68895 69728 84778 85592 88230 90234 92849 82495 85152 94230 76769 92707 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 293920000 9513 245 8984 18141;18142 14558 14558 1 9606 Homo sapiens 0.050939172214839346 GATPAPPGK Unmodified 794.42865 0.42865276 1505 Q13428-4;A0A3B3IS06;Q13428-3;Q13428;Q13428-7;Q13428-6;Q13428-8;Q13428-2;E7ETY2;A0A6I8PRA0;Q13428-5;H0Y8Y7 TCOF1 Treacle protein yes no 0 0 0 7 0 1 37.452 37.517 2 0.0035808 8275 20230619_1887_Aki_TMTPro18x_K_F7 94.662 36.495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9514 1505 8985 18143 14559 14559 1 9606 Homo sapiens 0.02321557663196927 GATQQILDEAER Unmodified 1329.6525 0.6524577 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14;B7Z4R3;Q9H369 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 2 0.816 1 1 1 46.919 46.97 2 5.856E-24 12740 20230619_1882_Aki_TMTPro18x_K_F3 259.35 225.09 519270 460700 505990 534830 504880 595370 533670 541640 622470 643710 622050 650730 701150 581340 586920 754890 660850 717610 480310 422300 515280 534890 525710 596240 539340 559770 629470 645320 641830 658000 707610 611160 603870 753220 631980 681770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2483600000 9515 3756 8986 18144;18145;18146 14560;14561;14562 14562 3 9606 Homo sapiens 0.0008175651596502576 GATVLPANTPGNVGSGK Unmodified 1538.8053 0.80526994 3486 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 1 0 1 46.818 46.818 3 3.63E-06 13064 20230619_1880_Aki_TMTPro18x_K_F1 100.77 75.449 47657 43666 49585 48338 50613 60875 57244 56127 62422 53132 54664 58693 58494 49752 59975 66684 62651 68987 44114 40005 50229 48617 52700 60493 57493 57584 62970 54043 56663 59047 59657 52512 61148 66844 59962 65476 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97772000 9516 3486 8987 18147 14563 14563 1 9606 Homo sapiens 0.05741951912568766 GATYGKPVHHGVNQLK Unmodified 1704.906 0.90598704 210 A0A024R2Q4;P61313;A0A2R8YEM3;E7EQV9;E7ENU7;B4DLP4;E7EX53;A0A2R8Y738;P61313-2;B4DEN1;A4D1Q5 RPL15;LOC136321 Ribosomal protein L15;60S ribosomal protein L15 yes no 0 0 1 3.5 0.5 1 1 35.407 35.459 5 2.7815E-14 7729 20230619_1882_Aki_TMTPro18x_K_F3 180.74 135.48 762050 769290 900930 843660 973400 862480 1155500 1006000 641450 955770 897980 588230 602330 450330 903760 336620 394170 174910 706740 704520 904360 846870 1006600 874850 1138700 1016600 694000 956180 895150 608990 637080 463430 882380 333230 380550 168650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1922399999.9999998 9517 210 8988 18148;18149 14564;14565 14564 2 9606 Homo sapiens 0.08173028686132966 GAVAEDGDELR Unmodified 1130.5204 0.52038089 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1;G3V3C7;A0A0C4DGK8;G3V5D9;G3V2D9 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 0 1 0 1 38.082 38.082 2 1.429E-24 9233 20230619_1880_Aki_TMTPro18x_K_F1 217.47 153.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9518 3515 8989 18150 14566 14566 1 9606 Homo sapiens -0.03965848500956781 GAVAEDGDELRTEPEAK Unmodified 1785.8381 0.83808621 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1;G3V3C7;A0A0C4DGK8;G3V5D9 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 1 2 0.816 1 1 1 41.696 41.743 3 1.2409E-18 10810 20230619_1880_Aki_TMTPro18x_K_F1 186.97 157.7 658850 515210 573860 640620 673680 725530 681900 686700 759350 767890 832880 847870 867600 739080 678530 1195300 584210 944080 608400 472810 591890 637710 692190 726390 689560 706390 772320 774110 852470 854390 875170 789580 691220 1178100 562370 898030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1689799999.9999998 9519 3515 8990 18151;18152;18153 14567;14568;14569 14567 3 9606 Homo sapiens -0.023399305458951858 GAVAIADAIR Unmodified 955.54508 0.5450795 162 A0A024R1U0;P46060;B4DY16;B4E0U0;H0Y4Q3 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 0 6.5 0.5 1 1 49.197 49.278 2 3.1543E-05 13238 20230619_1887_Aki_TMTPro18x_K_F7 154.49 111.37 363260 288640 322760 351520 365860 442670 389010 386490 447180 275800 311520 240860 312450 228900 289660 345440 345080 254070 335530 264820 332130 350980 377700 439280 392580 395730 446270 283970 325580 246290 317660 242730 298280 339990 329000 242620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 376730000 9520 162 8991 18154;18155 14570 14570 1 9606 Homo sapiens 0.06552876163073051 GAVAMAETLK Unmodified 989.52157 0.52156686 162 A0A024R1U0;P46060;B4DY16;B4E0U0;H0Y4Q3 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 0 7.5 0.5 1 1 52.416 52.49 2 4.5287E-05 14744 20230619_1887_Aki_TMTPro18x_K_F7 147.36 97.236 147240 131960 146970 160640 146760 195780 179250 170000 202860 174530 159720 133970 181210 134680 158590 187090 173680 144370 136230 121010 149470 160310 153610 194620 179520 175570 203570 175010 166670 138020 183090 141740 162650 184700 165830 137690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165970000 9521 162 8992 18156;18157 14571 14571 1 9606 Homo sapiens 0.026386943342572522 GAVDAAVPTNIIAAK Unmodified 1409.7878 0.78782897 472 B4E054;A0A024R7X3;B3KUZ7;A0A024R7U9;Q9UI12-2;Q9UI12;Q8TF11;E5RG49;E5RHH0;E5RK31;E5RJG1 ATP6V1H V-type proton ATPase subunit H yes no 0 0 0 7.5 0.5 1 1 56.154 56.212 3 9.041E-08 16274 20230619_1888_Aki_TMTPro18x_K_F8 113.76 98.212 99153 79001 99231 101020 87099 102910 103300 109470 135900 106480 113770 112030 112790 102980 116070 119300 112050 140470 91670 72515 100630 100250 91969 104050 104240 111300 135610 107990 117730 113210 115350 107400 117780 120790 107440 133090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 283780000 9522 472 8993 18158;18159 14572;14573 14573 2 9606 Homo sapiens 0.09932656377623061 GAVDGGLSIPHSTK Unmodified 1337.6939 0.69392858 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9;Q5T7N0 RPL5 60S ribosomal protein L5 yes no 0 0 0 7.5 0.5 1 1 43.949 43.999 3 1.459E-08 10846 20230619_1887_Aki_TMTPro18x_K_F7 147.35 120.23 224650 190250 218550 248540 256410 285010 236590 244070 239730 252630 256170 273170 244490 205390 218580 232300 272380 287540 207730 174630 223250 246590 262810 284470 239900 252410 244860 255420 261650 273930 248680 215620 225770 236060 260190 272470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 939450000 9523 1916 8994 18160;18161 14574;14575;14576 14574 3 9606 Homo sapiens 0.03858937275322205 GAVEAAHQAFPGWAGQSPGAR Unmodified 2063.9926 0.99257022 2570 B4DVV1;F5H4B6;B4DQ15;Q8IZ83-3;Q8IZ83 ALDH16A1 Aldehyde dehydrogenase family 16 member A1 yes no 0 0 0 1 0 1 48.305 48.305 3 3.2381E-08 13639 20230619_1880_Aki_TMTPro18x_K_F1 111.66 103.06 12658 9938.8 12287 12590 14003 13519 15539 15010 17442 14660 18896 16927 14979 16213 17241 16873 19100 21351 11698 9122.5 12539 12512 14435 13638 15636 15223 17699 14909 19138 17070 15544 16773 17594 17197 18272 20224 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20744000 9524 2570 8995 18162 14577 14577 1 9606 Homo sapiens 0.003133634500500193 GAVECCPNCR Unmodified 1221.4689 0.46889614 3532 P31689;P31689-2 DNAJA1 DnaJ homolog subfamily A member 1 yes no 0 0 0 3 0.816 1 1 1 30.665 30.737 2 2.8044E-09 5866 20230619_1882_Aki_TMTPro18x_K_F3 195.27 171.84 42698 20200 45486 44770 66677 79669 44384 42754 57016 46832 69611 60938 76616 62446 53162 30163 75436 65831 39399 18732 46284 43568 67052 77000 46455 46336 57844 47618 71038 61247 76838 62725 55559 32916 71895 62183 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 81206000 9525 3532 8996 18163;18164;18165 14578;14579;14580 14579 3 9606 Homo sapiens -0.132979550625123 GAVGALLVYDIAK Unmodified 1288.7391 0.73908786 369;3946 H3BSC1;A0A024R5Z8;P62491;H3BMH2;P62491-2;Q15907-2;B4DMN1;Q15907 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B no no 0 0 0 2 0 1 63.184 63.193 3 5.4161E-06 20057 20230619_1881_Aki_TMTPro18x_K_F2 124.42 100.99 210530 155970 185920 250490 168930 292580 217060 206820 330120 273540 254940 304640 344390 278990 307390 378570 335490 352580 194360 143590 191190 245420 179230 290290 219450 219110 326850 274100 269350 306980 346870 293900 315170 377150 320840 335100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215480000 9526 369;3946 8997 18166 14581 14581 1 9606 Homo sapiens 0.10626787808496374 GAVGAYGSER Unmodified 965.45666 0.45665842 142 Q8N523;A0A024R1I7;Q9UBB9;H0Y4U8;B1AHQ3 TFIP11 Tuftelin-interacting protein 11 yes no 0 0 0 3.5 0.5 1 1 33.558 33.624 2 1.5929E-09 7020 20230619_1882_Aki_TMTPro18x_K_F3 205.36 166.58 20847 12407 21526 23253 28960 31263 25404 27605 34458 23627 30289 29239 31348 25342 32107 17636 37355 28617 19249 11458 21932 22674 29405 30901 26100 28339 34388 24286 31316 29282 31993 25883 32837 18512 35630 27097 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10481000 9527 142 8998 18167;18168 14582;14583 14582 2 9606 Homo sapiens -0.027451641473703603 GAVGGTFDR Unmodified 878.42463 0.42463001 3832 Q13057;Q13057-2;K7EN91 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes no 0 0 0 4.33 0.471 2 1 36.998 37.066 2 3.1969E-06 8305 20230619_1885_Aki_TMTPro18x_K_F5 187.78 135.99 46896 35184 38352 43011 46056 48221 56191 58339 77565 57917 65814 61823 71928 58543 63280 75424 80809 74690 43276 32288 39822 42875 47534 48601 56699 58867 77263 58710 68309 62533 72815 61401 65530 75443 77105 70971 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130550000 9528 3832 8999 18169;18170;18171 14584;14585 14585 2 9606 Homo sapiens -0.019445318305315595 GAVHQLCQSLAGK Unmodified 1367.698 0.6979681 1243 A0A140VKA9;P09417;P09417-2 QDPR Dihydropteridine reductase yes no 0 0 0 3 0 1 45.393 45.469 3 3.9312E-08 12042 20230619_1882_Aki_TMTPro18x_K_F3 160.18 130.88 466710 390990 432930 511140 430090 451940 435530 437590 453950 579950 572540 579850 584970 463220 515560 628470 576500 627490 431360 358910 442930 505420 446980 461270 439690 452020 466810 578170 582410 584660 593070 490590 529500 628480 551360 595810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 658580000 9529 1243 9000 18172 14586 14586 1 9606 Homo sapiens 0.028827034973801346 GAVIATELK Unmodified 900.52803 0.52803245 3242 O15371-2;O15371-3;O15371;B4E1K8 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 0 6.33 0.471 2 1 49.971 50.05 2;3 0.00018136 13964 20230619_1886_Aki_TMTPro18x_K_F6 111.17 69.719 163910 144830 180520 177590 184810 198490 204350 187180 224560 203210 212060 198580 220640 170990 190270 233700 202500 201090 151760 132830 182050 176960 192050 198900 205520 192470 227090 204420 218430 200990 223360 180640 194930 231890 193620 191350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 547750000 9530 3242 9001 18173;18174;18175 14587;14588 14587 2 9606 Homo sapiens 0.0737895555726027 GAVITQIR Unmodified 856.51305 0.51305109 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;Q6ZS03;B4DKR8;Q96CF6;Q2HJC8 HDLBP Vigilin yes no 0 0 0 1.5 0.5 1 1 41.522 41.561 2 0.0017808 10766 20230619_1880_Aki_TMTPro18x_K_F1 137.18 79.012 288420 221740 247350 270530 313150 345490 315960 320140 417280 334190 356130 359840 391660 304860 281500 375850 396650 362420 266280 203470 255830 270170 320410 343080 321450 329100 416740 337960 369680 362330 393310 320140 295040 375530 378160 344490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 197640000 9531 292 9002 18176;18177 14589;14590 14589 2 9606 Homo sapiens 0.07905508479927903 GAVIVVSHDAR Unmodified 1122.6146 0.61455605 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7;A0A0G2JIC2;B4DNU2 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 5.5 1.12 1 1 1 1 35.635 35.702 3 4.4858E-31 7873 20230619_1886_Aki_TMTPro18x_K_F6 235.01 197.59 192630 160400 179360 189140 187090 203400 183790 177460 230020 206700 225900 188750 231730 169560 202020 204290 222700 196240 178040 147090 183460 188850 193720 204050 186970 183910 231510 206870 231930 191900 234720 177520 207090 204300 212690 186570 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 572420000 9532 1296 9003 18178;18179;18180;18181 14591;14592;14593 14592 3 9606 Homo sapiens 0.058153351118335195 GAVLHHLVNK Unmodified 1086.6298 0.62981218 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 3.5 0.5 1 1 40.446 40.495 4 0.00011715 9810 20230619_1882_Aki_TMTPro18x_K_F3 133.86 112.49 64100 50286 62796 61343 67869 78284 67339 71918 84187 79378 75320 89776 87542 74372 67235 92435 92243 98194 59246 46138 63967 61274 70137 77721 68466 74085 84491 80148 78306 90105 88024 78183 70246 92842 88056 93182 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97453000 9533 4372 9004 18182;18183 14594 14594 1 9606 Homo sapiens 0.08996246699689436 GAVLPIR Unmodified 724.45956 0.45955895 1192 A0A140VJP5;P31153;B4DEX8;P31153-2 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase yes no 0 0 0 2 0.816 1 1 1 43.988 44.038 2 0.006965 11887 20230619_1880_Aki_TMTPro18x_K_F1 128.89 39.438 703490 582130 641000 647020 644770 808890 656110 658550 817650 852160 897420 826320 932330 723350 719020 1038900 964620 897100 650070 533540 656490 650330 670950 802180 666140 688230 827300 850190 917710 837160 940020 766380 750220 1030000 920100 853820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 633810000 9534 1192 9005 18184;18185;18186 14595;14596 14595 2 9606 Homo sapiens 0.08630755768081144 GAVLPQEISQVNQHHK Unmodified 1783.9329 0.93293007 4219 Q8IZH2-2;Q8IZH2;H7C5E4 XRN1 5'-3' exoribonuclease 1 yes no 0 0 0 8 0 1 42.559 42.562 4 9.2679E-06 10527 20230619_1888_Aki_TMTPro18x_K_F8 109.99 92.29 41957 23118 38133 42394 47185 47351 47061 48901 54748 45364 57000 52593 49100 45370 50272 58909 57144 58449 38688 21352 39213 41263 48271 47519 47699 49751 55380 46268 58004 52872 50450 47731 51529 58929 54617 55515 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47359000 9535 4219 9006 18187 14597 14597 1 9606 Homo sapiens 0.07232092506660592 GAVNMPFMDFLTEDGFEK Unmodified 2046.9067 0.90669983 1461 Q53EW8;A0A384NKQ2;Q16762 TST Sulfurtransferase;Thiosulfate sulfurtransferase yes no 0 0 0 6.5 0.5 1 1 66.006 66.04 3 1.3151E-09 20530 20230619_1887_Aki_TMTPro18x_K_F7 132.59 127.06 10653 8154.6 9738.2 13635 11501 17865 15204 17047 19403 14731 14107 13889 16667 15272 13249 16362 15774 15370 9839.3 7510.3 10029 13360 11954 17699 15238 17399 19305 14999 14831 14191 16779 15761 13689 16362 15065 14610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20633000 9536 1461 9007 18188;18189 14598 14598 1 9606 Homo sapiens -0.07487725562009473 GAVQCTCHTGYR Unmodified 1408.5976 0.59760213 2810 D3DQQ7;O75096 LRP4 Low-density lipoprotein receptor-related protein 4 yes no 0 0 0 8 0 1 28.583 28.609 3 0.0022949 5165 20230619_1888_Aki_TMTPro18x_K_F8 74.326 73.421 2390.5 1351.2 1688 1775.4 2625.6 2976.8 3338.8 4169.1 2928.9 1639.4 2686.3 1859.7 3844.6 3326.7 2358.5 2879.9 3065.3 1846.5 2200.8 1242.6 1789.2 1775.3 2672.6 2944 3312.3 4103.8 2991.8 1800.7 2811.7 1936.3 3817.1 3357.5 2465.6 2843.3 2917.6 1769.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1935200 9537 2810 9008 18190 14599 14599 1 9606 Homo sapiens -0.09035276827921734 GAVSAEQVIAGFNR Unmodified 1417.7314 0.73137672 2200 B1AQP2;Q9UHV9 PFDN2 Prefoldin subunit 2 yes no 0 0 0 4.5 3.5 1 1 56.447 56.476 2;3 5.4011E-29 17003 20230619_1880_Aki_TMTPro18x_K_F1 205.8 165.3 169100 140610 170290 174300 138140 170740 179540 164570 190270 224490 211090 226620 219990 194320 220250 245770 219820 251910 156380 129010 172460 173230 147260 172760 179010 170230 194240 223670 216150 228800 224290 204220 224100 246420 210550 239080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1108600000 9538 2200 9009 18191;18192 14600;14601 14600 2 9606 Homo sapiens 0.039220285409328426 GAVTDDEVIRK Acetyl (Protein N-term) 1243.6408 0.64083038 222 Q6I9Y2;A0A024R332 THOC7;NIF3L1BP1 THO complex subunit 7 homolog no no 1 0 1 1 0 1 44.457 44.457 2 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29499000 9539 222 9010 18193 0 9606 Homo sapiens 0.028755594926451522 GAVVEVIQK Unmodified 941.55458 0.55458155 1908 A1X283;G3V144;A0A1B0GUF2 SH3PXD2B SH3 and PX domain-containing protein 2B yes no 0 0 0 7 0 1 49.701 49.785 2 4.1293E-06 13501 20230619_1887_Aki_TMTPro18x_K_F7 185.84 100.77 55641 48325 56413 55258 99363 107080 92784 82086 109190 78378 85962 85618 96507 73647 85556 92920 101290 96038 51476 44295 57901 55906 99621 103780 94344 85459 109310 79721 89750 86221 97611 77424 88095 93218 96725 91203 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48827000 9540 1908 9011 18194 14602 14602 1 9606 Homo sapiens 0.0814664444861819 GAVVGIDLGTTNSCVAVMEGK Unmodified 2077.0184 0.018375541 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;Q8N1C8;A0A7I2V2S7;A0A7I2V3F7;H0Y8K0;A0A3B3ITI4 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 8 0 1 61.599 61.628 2 0.037695 18481 20230619_1888_Aki_TMTPro18x_K_F8 77.593 61.456 5181.2 2202.7 4656.2 2950.7 2428.5 4240.4 4174.4 4107.3 3063 5145.4 3948.6 4723.3 5369.6 4409.8 3609.2 5228.7 5582 4912.7 4772.5 2029.7 4731.5 2939.1 2756 4182 4078.1 4230.5 3229.6 5127 4076.4 4799.6 5352.1 4603.4 3818.3 5219 5317.2 4671.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58516000 9541 1488 9012 18195 14603 14603 1 9606 Homo sapiens 0.022947087951251888 GAVVPPVHDIYR Unmodified 1321.7143 0.71427009 3829 Q12996;B4DMA4;E9PLP8;B4DFQ5;H0YE74 CSTF3 Cleavage stimulation factor subunit 3 yes no 0 0 0 7.5 0.5 1 1 43.925 43.976 3 1.6375E-07 11076 20230619_1888_Aki_TMTPro18x_K_F8 140.39 94.793 94074 78352 95065 103730 97714 115540 109220 102940 132910 114160 122180 126210 133460 100670 119320 125120 134670 137780 87005 71934 96596 102800 101680 115620 110170 106370 133590 115180 126380 126700 135100 106060 122450 126030 128720 130720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166450000 9542 3829 9013 18196;18197 14604;14605 14605 2 9606 Homo sapiens 0.06628152725784275 GAVYSFDPVGSYQR Unmodified 1544.726 0.72595699 1227 Q53FT8;A0A140VK45;P20618;Q59GN1 PSMB1 Proteasome subunit beta type;Proteasome subunit beta type-1 yes no 0 0 0 7.5 0.5 1 1 53.994 54.063 3 3.7836E-09 15278 20230619_1888_Aki_TMTPro18x_K_F8 164.13 144.03 68265 65398 73324 66298 66228 79753 70374 64471 138240 76806 70287 64475 79002 68152 82360 72518 70080 72248 63229 59861 73917 67102 69645 79299 72752 67259 134090 76778 75648 66141 80536 70424 82958 72832 67185 68617 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165630000 9543 1227 9014 18198;18199 14606 14606 1 9606 Homo sapiens -0.02461695041506573 GAWMDLSIFR Oxidation (M) 1210.5805 0.58047873 4734 Q9Y4A0 JRKL Jerky protein homolog-like yes yes 0 1 0 6 0 1 54.753 54.83 3 0.041826 15931 20230619_1886_Aki_TMTPro18x_K_F6 45.368 17.626 64383 57968 59634 67691 61268 73480 71768 69576 74794 60838 51379 41675 56366 43455 58393 63048 60506 48502 59534 53138 61059 67640 63840 73767 71830 71118 75079 61402 53994 43301 57453 45822 59480 62217 57788 46266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48552000 9544 4734 9015 18200 14607 14607 2888 1 9606 Homo sapiens -0.01638829371427164 GAWSNVLR Unmodified 901.477 0.47699993 3439;3388;1072 A0A0S2Z3H3;P12235;A8K787;A0A0S2Z3C4;P05141;Q6NVC0;P12236;Q6I9V5;Q59EI9 SLC25A4;SLC25A5;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 0 0 3.5 0.5 1 1 48.848 48.906 2 0.0016488 13623 20230619_1882_Aki_TMTPro18x_K_F3 139.28 98.053 831040 797030 817080 766020 900290 1131900 1039700 1044500 1233600 310190 274600 188490 244110 195020 634580 276960 268070 185680 769150 729220 832450 781630 933590 1114700 1045400 1053200 1204400 350880 325870 198100 268750 205330 616170 273080 259460 177630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2328400000 9545 1072;3388;3439 9016 18201;18202 14608 14608 1 9606 Homo sapiens 0.02232051303087701 GAYCLSVSDFDNAK Unmodified 1545.677 0.67695789 3443 P12931;P12931-2;P12931-3 SRC Proto-oncogene tyrosine-protein kinase Src yes no 0 0 0 6 0 1 56.851 56.923 3 0.0079596 16832 20230619_1886_Aki_TMTPro18x_K_F6 61.532 44.043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9546 3443 9017 18203 14609 14609 1 9606 Homo sapiens -0.07405351392799275 GAYDIFLNAK Unmodified 1110.571 0.5709599 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;B4DSR0;A0A804HJI0 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 3.67 3.09 1 1 1 60.568 60.582 2;3 2.7982E-09 18012 20230619_1888_Aki_TMTPro18x_K_F8 195.32 134.35 241030 196260 209030 230090 186970 229600 234170 227050 251580 277440 262250 283590 297580 251120 265750 315810 287730 315370 222620 179980 214820 229620 197470 232140 233950 233530 255920 277820 270280 286470 301080 263540 272290 316140 275280 299440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 491320000 9547 1723 9018 18204;18205;18206 14610;14611;14612 14612 3 9606 Homo sapiens 0.020097256146982545 GAYGGGYGGYDDYNGYNDGYGFGSDR Unmodified 2716.0375 0.037467316 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;H0YB39;Q68DG4;H0YBD7 HNRNPH1;DKFZp686A15170 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 56.613 56.648 3 1.4617E-20 17140 20230619_1883_Aki_TMTPro18x_K_F4 160.05 159.31 20390 16063 19151 26368 14913 17924 21033 20204 19744 33838 29996 29634 33177 30579 25937 39934 35837 32529 18841 14789 19539 25650 15996 18807 20826 20862 20658 33315 30424 30313 33438 31988 27125 39525 34170 30987 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29078000 9548 1427 9019 18207;18208 14613;14614 14613 2 9606 Homo sapiens -0.2519099184660263 GCAFAQFMTQEAAQK Unmodified 1686.7494 0.74941132 430 A0A024R753;Q9NW13;Q9NW13-2;B4DJ90 RBM28 RNA-binding protein 28 yes no 0 0 0 8 0 1 60.75 60.782 3 0.024727 18095 20230619_1888_Aki_TMTPro18x_K_F8 51.726 32.402 19369 14633 15938 18697 16850 18257 18180 17627 24394 20128 20352 20222 21709 18937 19460 19426 19483 20387 17875 13434 16505 18538 17483 18482 18441 18124 24329 20223 21128 20476 22009 19603 19829 19571 18647 19351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10391000 9549 430 9020 18209 14615 14615 1 9606 Homo sapiens -0.06649340590888642 GCAFVTFTTR Unmodified 1158.5492 0.5491786 3017 Q92879-3;Q92879-2;Q92879-5;G5EA30;Q92879;Q92879-4;Q92879-6 CELF1 CUGBP Elav-like family member 1 yes no 0 0 0 4 0 1 50.979 51.01 2 0.00092438 14448 20230619_1883_Aki_TMTPro18x_K_F4 115.13 99.752 137910 129390 131970 127720 123510 142810 144440 137520 162640 79546 87434 72344 86132 62144 110100 96796 92005 82564 127590 118420 134410 129430 129590 143190 144950 139340 161360 83429 93160 73589 89037 66310 110460 95957 88139 78605 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116690000 9550 3017 9021 18210 14616 14616 1 9606 Homo sapiens -0.023754024055278933 GCALQCAILSPAFK Unmodified 1534.7636 0.76360482 3544;769;1249 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;O14992;A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72;B4DZB4;Q53ZP9;A0A140VKE7;B4DZR0;O95757;E9PDE8;B4DXT2;D6RJ96;B3KNM0 HSPA4;HEL-S-5a;HS24/p52;HSPH1;HSPA4L Heat shock 70 kDa protein 4;Heat shock protein 105 kDa;Heat shock 70 kDa protein 4L no no 0 0 0 4 0 1 61.179 61.183 2 5.0766E-08 18822 20230619_1883_Aki_TMTPro18x_K_F4 185.96 161.11 94921 85809 98845 101320 71406 94983 93850 92887 95983 79145 65515 44476 59927 51256 75125 85156 68819 48038 87859 78665 99701 100990 77045 96454 93428 94692 96412 79704 68314 47088 62081 54413 75829 82928 65763 46096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86231000 9551 3544;769;1249 9022 18211 14617 14617 1 9606 Homo sapiens 0.017613566280942905 GCAQALR Unmodified 774.38066 0.38065671 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 0 6 1.41 1 1 1 1 1 29.958 30.017 2 0.010382 5810 20230619_1886_Aki_TMTPro18x_K_F6 118.06 61.546 198620 107500 251200 229520 331280 325800 245670 286660 259730 107780 143720 120460 105740 99302 224540 68260 156630 95870 183670 99543 251780 222830 335010 321060 253240 290620 258750 119130 151360 121140 114830 101480 221590 71175 150100 90988 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 117500000 9552 1439 9023 18212;18213;18214;18215;18216 14618;14619;14620 14619 3 9606 Homo sapiens -0.015558395285097504 GCASCIAYPHEVIR Unmodified 1631.7548 0.75483105 4428 Q9BSK2 SLC25A33 Solute carrier family 25 member 33 yes yes 0 0 0 7.5 0.5 1 1 41.989 42.024 3 1.0476E-06 10073 20230619_1887_Aki_TMTPro18x_K_F7 124.24 108.86 32262 21609 40427 40536 47198 41499 41873 37638 42410 38774 48844 49250 47124 41672 44794 31524 51507 46914 29860 19946 40475 39364 48231 41804 42556 38778 43420 39452 49743 49234 48047 42710 45882 32755 49185 44413 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44939000 9553 4428 9024 18217;18218 14621 14621 1 9606 Homo sapiens -0.03577617008431844 GCAVVEFK Unmodified 908.44259 0.44258826 3631 P52272-2;P52272;Q59ES8;M0R019;M0R2T0;B4DEG4;M0R0N3;M0QYL3 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 5.83 1.07 1 1 2 2 48.836 48.91 2;3 0.0049663 13435 20230619_1886_Aki_TMTPro18x_K_F6 124.08 85.919 1045400 872660 997530 1123100 1113600 1175300 1328400 1170900 1364200 1362700 1225300 1357300 1440400 1183300 1238500 1485700 1533000 1446500 966390 800930 1020000 1114200 1152700 1184500 1327400 1202100 1383000 1366700 1274100 1371800 1453800 1242500 1280500 1485300 1463300 1374700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2552200000 9554 3631 9025 18219;18220;18221;18222;18223;18224 14622;14623 14622 2 9606 Homo sapiens -0.015295329000196034 GCCFVTFYTR Unmodified 1309.5584 0.55836308 3017 Q92879-3;Q92879-2;Q92879-5;G5EA30;Q92879;Q92879-4;Q92879-6;E9PSH0;E9PKU1;E9PQK4;F5H4Y5;F5H0D8;B2RA86;B4DS31;A0A0J9YX66;B4DDE7;A0A1B0GU44;E9PC62;A0A1B0GUN8;Q5VZZ6;A0A0J9YXJ0;V9GYD9;B4DT00;B4DSZ2;O95319-3;O95319-4;O95319;O95319-5;O95319-2 CELF1;CELF2 CUGBP Elav-like family member 1;CUGBP Elav-like family member 2 yes no 0 0 0 4 0 1 54.014 54.029 2 0.00029232 15805 20230619_1883_Aki_TMTPro18x_K_F4 133.13 124.18 123760 113620 103510 96469 161770 231700 142070 141420 240740 34821 32769 36309 41028 37940 54011 48119 44123 46443 114370 103870 107750 100630 163580 221850 147200 147760 230730 41477 43806 36965 42358 39605 54115 48117 42328 44121 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73887000 9555 3017 9026 18225 14624 14624 1 9606 Homo sapiens -0.08403377111494592 GCDHLEQESR Unmodified 1229.5095 0.50949863 2540 J3QT09;B4DM92;Q9BQF6-4;Q9BQF6-5;Q9BQF6-2;Q9BQF6 SENP7 Sentrin-specific protease 7 yes no 0 0 0 1 0 1 27.456 27.456 3 0.00021419 5009 20230619_1880_Aki_TMTPro18x_K_F1 103.91 86.209 9284.3 3403.3 11891 11786 13190 18357 9508 13375 12882 8642.8 14993 14815 13571 14103 14907 7663 19083 13259 8575.3 3193.5 11883 11277 13530 17918 9923.9 13871 12996 9188 15223 14733 13980 14223 15321 8145.5 18178 12556 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10620000 9556 2540 9027 18226 14625 14625 1 9606 Homo sapiens -0.09607574146912157 GCDVVVIPAGVPR Unmodified 1337.7126 0.71255553 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 7 0.816 1 1 1 52.474 52.549 2 3.2131E-07 14688 20230619_1887_Aki_TMTPro18x_K_F7 169.93 139.75 560550 455800 522140 614480 521690 604820 608940 568870 649410 728760 735500 774880 779140 676290 747180 827960 806530 901480 518010 418580 534210 607170 544530 611390 610220 588190 663170 729220 752860 781120 792390 708950 764100 833440 771760 855110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2581400000 9557 297 9028 18227;18228;18229 14626;14627 14626 2 9606 Homo sapiens 0.057207756455227354 GCEVIQEIK Unmodified 1074.5379 0.53794521 560 A0A024R983;P10155;P10155-3;P10155-5;P10155-4;P10155-2;H0Y9N5 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 0 0 4 0 1 50.1 50.134 2 0.00015178 14027 20230619_1883_Aki_TMTPro18x_K_F4 147.2 91.816 121240 97077 117450 132820 125140 159350 130570 131320 168100 160850 170410 171010 195490 152480 134820 197980 184880 195700 112060 89170 119860 131470 129760 158390 132510 136880 169240 161340 175740 172580 195790 160360 141280 197900 176480 185860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 362690000 9558 560 9029 18230 14628 14628 1 9606 Homo sapiens 0.0036577550035872264 GCEVTPDVNISGQK Unmodified 1502.7035 0.70350699 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 4.5 0.5 1 1 47.438 47.515 2;3 1.4553E-07 12831 20230619_1883_Aki_TMTPro18x_K_F4 159.99 139.78 37752 29721 42323 32313 30791 51776 36716 36002 39486 48586 50830 41477 48192 37667 46481 48867 48324 55733 34935 27239 42397 32694 33185 50479 36800 38186 40552 48212 51440 42330 49157 39612 47414 49298 46269 52835 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 300600000 9559 385 9030 18231;18232 14629;14630 14629 2 9606 Homo sapiens -0.02773662501454055 GCEVVVSGK Unmodified 933.45897 0.45896661 3494;2923 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;Q9NQS8;A7E2S3;E9PSF4;E9PJN9 RPS3 40S ribosomal protein S3 no no 0 0 0 5 0.707 1 2 1 41.48 41.57 2;3 8.6701E-05 10246 20230619_1883_Aki_TMTPro18x_K_F4 141.48 64.422 120490 65845 161600 156080 207100 249130 163570 207650 180160 145680 192380 228250 209790 188330 158750 107110 251740 226630 111490 61083 161410 151230 210420 243620 168140 213180 183020 153100 197760 226360 211280 191380 167130 115830 239790 214080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 866700000 9560 3494;2923 9031 18233;18234;18235;18236 14631;14632;14633 14631 3 9606 Homo sapiens -0.010424517339060912 GCGDLCR Unmodified 836.32691 0.32690658 1206 A0A140VJT8;P13489;A0A024RC87;H0YCR7 RNH1 Ribonuclease inhibitor yes no 0 0 0 2.5 0.5 1 1 30.461 30.541 2 0.019927 5802 20230619_1882_Aki_TMTPro18x_K_F3 105.27 72.486 51483 25946 59527 64611 101390 98608 76934 86739 77008 49536 70461 74234 58897 62428 79625 34719 87224 76060 47553 24104 60447 62425 101200 96797 79003 88395 78100 52844 72174 73800 61559 63313 80761 37803 83305 71845 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33937000 9561 1206 9032 18237;18238 14634 14634 1 9606 Homo sapiens -0.09780380022527879 GCGPCLR Unmodified 818.35273 0.3527274 2268 V9HW51;B2R960;O43396;Q59G46;K7ER96;K7EPB7 HEL-S-114;TXNL1 Thioredoxin-like protein 1 yes no 0 0 0 6.5 1.12 1 1 1 1 32.625 32.677 2 0.0095037 6776 20230619_1886_Aki_TMTPro18x_K_F6 119.23 113.45 171330 110150 160030 178060 210220 237940 199500 200370 250910 186910 213710 207140 243230 194250 180860 173050 274020 226010 158130 101470 164380 174880 214250 235070 203310 206910 251050 190420 222180 208900 244360 199830 190060 177260 260940 214280 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 160260000 9562 2268 9033 18239;18240;18241;18242 14635;14636;14637 14635 3 9606 Homo sapiens -0.0637148578025517 GCGTVLLSGPR Unmodified 1115.5757 0.5757277 32 Q0QEW2;H0YHA7;A0A024QZD1;J3QQ67;Q07020-2;Q07020;G3V203;F8VUA6 RPL18 60S ribosomal protein L18 yes no 0 0 0 2 0.816 1 1 1 44.058 44.099 2 4.0707E-18 11686 20230619_1881_Aki_TMTPro18x_K_F2 242.39 206.77 978570 911620 878190 777010 1006400 1367000 1100700 1057500 1178300 203490 215780 193730 188780 194020 392060 249350 243890 124710 904870 833410 902190 804340 1040000 1330100 1105900 1078700 1154300 253140 265980 198130 203830 202670 386090 243260 233960 120210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1107400000 9563 32 9034 18243;18244;18245 14638;14639;14640 14639 3 9606 Homo sapiens 0.02256286485817327 GCGVVEFKDEEFVK Unmodified 1641.7709 0.77085827 923 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;Q9Y655 MYEF2 Myelin expression factor 2 yes no 0 0 1 5 0 1 54.324 54.394 3 0.0038824 15576 20230619_1885_Aki_TMTPro18x_K_F5 77.279 57.44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9564 923 9035 18246 14641 14641 1 9606 Homo sapiens -0.024356322905077832 GCHINECLSR Unmodified 1244.539 0.53902462 3809 Q07954;Q59FG2 LRP1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 5 0 1 31.923 32.003 3 3.3883E-05 6399 20230619_1885_Aki_TMTPro18x_K_F5 142 127.3 10614 4573.8 11881 11842 15982 18616 17584 17519 19291 11142 16872 19203 13815 14411 16047 11882 17173 17925 9795.4 4256.8 12032 11437 16322 18263 17681 17800 19419 11859 17312 18959 14323 14879 16317 12334 16426 16958 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15303000 9565 3809 9036 18247 14642 14642 1 9606 Homo sapiens -0.07346333402369964 GCHLEGVAGHK Unmodified 1163.5506 0.55057558 499 Q5T9B9;A8K2X4;A0A024R878;P17813-2;P17813;Q96CG0;F5GX88;B7Z6Y5 ENG Endoglin yes no 0 0 0 6.5 0.5 1 1 32.388 32.452 4 7.2158E-07 6677 20230619_1886_Aki_TMTPro18x_K_F6 141.88 127 98494 24460 58321 85271 216300 157800 339730 336900 713160 184080 302430 437360 228180 300330 273000 240070 271240 458580 90372 23046 65282 82110 215610 158110 345890 327540 686680 202820 327190 427440 238300 310760 276610 254550 260840 432560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 311970000 9566 499 9037 18248;18249 14643 14643 1 9606 Homo sapiens -0.024657683167561117 GCHLLVATPGR Unmodified 1179.6183 0.61826122 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;Q5S4N1;B4E010 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 2 0.816 1 1 1 37.801 37.84 3 2.5875E-05 8809 20230619_1881_Aki_TMTPro18x_K_F2 138.65 104.91 210770 107080 203510 194380 219170 234710 239780 234220 255870 238790 263270 218900 253590 225530 215770 264840 261140 245980 194380 98930 207530 189570 226900 234130 241080 239380 259990 240540 269010 223600 257420 234460 222850 264320 249310 233880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 923310000 9567 1018 9038 18250;18251;18252 14644;14645 14644 2 9606 Homo sapiens 0.03563681614059533 GCHLQYQR Unmodified 1060.4872 0.48724704 3959 Q24JP5-4;Q24JP5;Q24JP5-2;H0YFQ2 TMEM132A Transmembrane protein 132A yes no 0 0 0 7 0 1 27.424 27.536 3 0.072705 4638 20230619_1887_Aki_TMTPro18x_K_F7 54.408 42.815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9568 3959 9039 18253 14646 14646 1 9606 Homo sapiens -0.04057709033986612 GCILTLVER Unmodified 1059.5747 0.57466507 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 7.5 0.5 1 1 55.961 56.021 2 6.77E-05 16132 20230619_1888_Aki_TMTPro18x_K_F8 160.88 124.48 409970 345220 364540 410690 340190 406980 400280 423500 407840 452300 361300 327270 448520 337700 374940 495270 423530 403070 378810 316580 374040 409380 357200 412170 400490 432170 413730 451650 376500 338550 451270 356540 385900 489630 404620 383890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 787590000 9569 12 9040 18254;18255 14647 14647 1 9606 Homo sapiens 0.047260721169323006 GCITIIGGGDTATCCAK Unmodified 1753.7797 0.77972517 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DHB3;B4DWQ3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 7.29 0.7 1 3 3 51.105 51.182 2;3;4 4.1193999999999997E-23 14011 20230619_1888_Aki_TMTPro18x_K_F8 245.92 219.14 238890 190870 225910 222790 188690 229710 220940 220270 240110 273570 258700 266920 288550 239400 255990 337530 302140 333980 220770 175040 229990 222540 200010 231550 221620 227130 244500 273360 265920 270430 292010 253100 263900 337130 288860 317140 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 8660700000 9570 3374 9041 18256;18257;18258;18259;18260;18261;18262 14648;14649;14650;14651 14650 4 9606 Homo sapiens -0.06701349987952199 GCLDFLR Unmodified 879.42727 0.42727255 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 8 0 1 52.974 53.049 2 0.015939 14838 20230619_1888_Aki_TMTPro18x_K_F8 110.61 64.241 237300 200210 195400 188350 191790 222540 227310 215030 237890 130940 122200 82085 90868 75185 174220 110260 103750 69829 219150 183230 201900 191840 200630 222350 227380 217960 236780 135540 129370 85526 97675 79629 171440 108200 99710 66877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202790000 9571 2326 9042 18263 14652 14652 1 9606 Homo sapiens -0.017263996972019413 GCLEGSQGTQALHK Unmodified 1484.7042 0.70417569 4195 Q86WQ0;Q86WQ0-2;U3KQ53 NR2C2AP Nuclear receptor 2C2-associated protein yes no 0 0 0 6 0 1 39.598 39.687 3 0.00016352 9407 20230619_1886_Aki_TMTPro18x_K_F6 95.195 69.215 94691 65093 90479 79596 90771 105970 93244 104510 123620 79512 90419 78181 92350 84255 88149 74523 118450 91937 87439 59759 92202 79579 94437 105090 94837 106140 122750 81756 94334 79688 94083 86210 91287 76077 112860 87235 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30321000 9572 4195 9043 18264 14653 14653 1 9606 Homo sapiens -0.01878823061724688 GCLELIK Unmodified 831.45242 0.45242467 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A8V8TL46;A0A8V8TMA9;A0A8C8UXK2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 7 0.816 1 1 1 52.44 52.516 2 0.0090158 14706 20230619_1887_Aki_TMTPro18x_K_F7 119.89 47.654 844700 739570 794590 834220 762650 911680 913100 801690 934250 826160 809570 717150 810450 635930 860960 1007200 949560 776520 781030 677780 811240 835880 799240 913550 912400 827660 945380 830630 836220 731130 829400 678270 880250 992810 906480 740620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 884170000 9573 2973 9044 18265;18266;18267 14654;14655 14654 2 9606 Homo sapiens 0.0299565510534876 GCLLYGPPGTGK Unmodified 1218.6067 0.60669348 896 V9HW24;A0A087X2I1;P62333;H0YJC0;H0YJS8;B4DR91 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 2.5 0.5 1 1 51.502 51.557 3 0.00018009 14828 20230619_1882_Aki_TMTPro18x_K_F3 100.55 85.863 408300 347410 388600 449560 404040 462310 475970 457140 520360 495070 431420 434100 508280 397080 486890 530440 460650 483260 377480 318850 397050 445690 420540 466330 477010 468450 524270 496500 450330 442270 515060 418050 494280 528140 441150 459420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 349330000 9574 896 9045 18268;18269 14656;14657;14658 14658 3 9606 Homo sapiens 0.006134398000540386 GCLTFVSK Unmodified 910.45824 0.45823833 4304 V9HVZ6;Q92747;Q59GQ0;A0A1W2PNV4;Q92747-2 HEL-68;ARPC1A Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 2.5 0.5 1 1 50.847 50.909 2 0.0016112 14525 20230619_1882_Aki_TMTPro18x_K_F3 139.88 86.323 245700 200780 221340 275540 305630 347360 275460 248820 310380 273920 296130 249860 240200 225110 251340 256980 300880 309090 227010 184420 228470 272820 310150 343460 280470 261760 313570 274950 301760 254030 247660 234750 258150 260620 287460 292990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 294860000 9575 4304 9046 18270;18271 14659 14659 1 9606 Homo sapiens -0.0005724638297124329 GCMEEKPQEVQTSR Oxidation (M) 1693.74 0.73996885 57 A0A024QZQ1;Q96EB6;B3KNK3;I1Y8W7;B0QZ35;E9PC49;A8K128 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes no 0 1 1 3 0 1 33.598 33.664 3 0.0016467 7058 20230619_1882_Aki_TMTPro18x_K_F3 81.619 70.564 16986 12766 13860 18259 21055 24271 22390 20572 22592 23121 22619 19225 21625 21089 20909 24930 26683 22811 15675 11735 14481 18051 21347 23992 22490 21337 23014 23119 23143 19775 22094 21885 21614 24862 25448 21702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15688000 9576 57 9047 18272 14660 14660 29 1 9606 Homo sapiens -0.07915153667067898 GCPPDDIENPR Unmodified 1268.5455 0.54554978 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348;A0A7I2V5T3;A0A7I2V5Z8;E7EQW5;E9PLR6;Q5T3E6;Q5T3E5;E9PQJ2 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 0 1.5 0.5 1 1 37.267 37.267 2 7.4577E-17 8578 20230619_1881_Aki_TMTPro18x_K_F2 183.67 158.9 44723 35079 40510 46536 53696 55433 54870 56115 75622 58853 63582 73897 61584 51700 55532 78560 78953 74898 41311 32214 41738 46162 54776 55395 55872 57346 75331 59808 65772 73584 62664 55463 57995 78233 75287 71192 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56161000 9577 1647 9048 18273;18274 14661;14662 14662 2 9606 Homo sapiens -0.07798116970047886 GCPPVFNTLR Unmodified 1159.5808 0.58081308 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;Q9BXJ9-4;A0A8V8TQT7 NAA15;NARG1 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 2.5 0.5 1 1 48.605 48.677 2 0.0043417 13540 20230619_1882_Aki_TMTPro18x_K_F3 93.701 70.664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9578 2297 9049 18275;18276 14663;14664 14664 2 9606 Homo sapiens 0.007405903484368537 GCPVNTEPSGPTCEK Unmodified 1631.692 0.69195602 700 P53701;A0A024RBY9 HCCS Cytochrome c-type heme lyase yes no 0 0 0 3.67 0.471 1 2 39.907 39.956 3 5.9274E-06 9595 20230619_1882_Aki_TMTPro18x_K_F3 116.63 100.06 16681 12106 18535 21410 22574 21522 21890 19208 26549 21366 25490 28571 26453 25794 21255 26198 34621 30318 15427 11160 18749 20839 23083 21699 22247 19859 26723 21713 26259 28576 26759 26705 22467 26538 32966 28768 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39769000 9579 700 9050 18277;18278;18279 14665;14666 14665 2 9606 Homo sapiens -0.09862227587063899 GCQAEADRAEVSR Unmodified 1447.6474 0.64738909 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9;B3KY97 RRP12 RRP12-like protein yes no 0 0 1 1.5 0.5 1 1 28.455 28.492 3 1.0403E-10 5466 20230619_1880_Aki_TMTPro18x_K_F1 173.25 152.87 16114 11526 15561 16869 21736 20849 21849 21798 20577 24453 14800 11991 25944 13630 14016 18066 26925 23015 14884 10601 15953 16645 22059 20803 21976 22259 20860 24183 15916 12791 25517 14305 15192 18342 25610 21822 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87297000 9580 2355 9051 18280;18281 14667 14667 1 9606 Homo sapiens -0.0585287061830968 GCSFLPDPYQK Unmodified 1310.5965 0.59652272 58 Q53FJ5;A0A024QZQ2;Q59EN5;P07602;P07602-2;P07602-3;B4DEK5;B4DRB7;Q5BJH1 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes no 0 0 0 8 0 1 55.709 55.771 3 5.3142E-05 16007 20230619_1888_Aki_TMTPro18x_K_F8 104.22 90.316 98814 75836 93632 103300 83035 122970 98951 103520 133170 102510 105910 164050 162400 161640 99330 198230 192960 353460 91295 69668 95482 102280 87836 122300 99915 107110 132600 105640 112740 163650 161260 168890 107880 206870 184830 333480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165490000 9581 58 9052 18282 14668 14668 1 9606 Homo sapiens -0.046351679251984024 GCTALHYAVLADDYR Unmodified 1723.7988 0.79880436 1218 A0A2U3TZY2;A0A140VK11;Q9H078-4;Q9H078-2;Q9H078;Q9H078-5;Q9H078-3;A0A2R8Y602;F5H392;F5H7A5;A0A2R8Y6R5;A0A2R8YDH5 CLPB Caseinolytic peptidase B protein homolog yes no 0 0 0 6.5 0.5 1 1 49.738 49.819 3 0.00033049 13805 20230619_1886_Aki_TMTPro18x_K_F6 89.866 74.664 168760 124210 142400 161320 150280 183190 168750 173680 196110 180780 189820 190610 181090 164810 186440 191380 191900 199960 155740 114070 147100 160120 156210 183300 169940 178260 197940 182650 194710 192190 185430 172230 189820 192370 183610 189800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110050000 9582 1218 9053 18283;18284 14669 14669 1 9606 Homo sapiens -0.03414309310437602 GCTATLGNFAK Unmodified 1138.5441 0.54409322 3457;4261 P15880;Q6IPX5;Q3KQT6;Q8N5L9;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;Q8NI62 RPS2;rps2;OK/KNS-cl.6 40S ribosomal protein S2 no no 0 0 0 1.5 0.5 1 1 48.871 48.904 2 6.377E-12 13905 20230619_1880_Aki_TMTPro18x_K_F1 202.97 172.31 744680 609340 652200 692610 680130 796080 775910 771410 692050 755520 598780 535050 826710 597170 594130 1194100 420200 699330 687880 558620 670980 694160 707050 796580 774260 789160 707040 757590 628250 556870 824530 645410 602200 1160700 405660 668440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1126600000 9583 3457;4261 9054 18285;18286 14670;14671 14670 2 9606 Homo sapiens -0.019637062681340467 GCTPSGEGADSEPR Unmodified 1418.5732 0.5732211 4311 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 1 0 1 30.615 30.615 2 3.7229E-11 6185 20230619_1880_Aki_TMTPro18x_K_F1 176.18 150.45 9776.9 4791.6 12520 11353 14396 22098 9798.3 15822 12003 10585 16057 20401 15671 16882 16412 10164 16710 17172 9038.8 4447.9 12515 11050 14730 21351 10242 16436 12259 11279 16299 20125 16061 17160 16656 10740 15989 16234 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9771100 9584 4311 9055 18287 14672 14672 1 9606 Homo sapiens -0.11932258500451098 GCTVWLTGLSGAGK Unmodified 1405.7024 0.70238478 3250 O43252;Q05BW9;B7Z4W3;Q5TB52;O95340;O95340-2 PAPSS1;PAPSS2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase;Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 3.5 0.5 1 1 60.115 60.131 3 8.77E-07 18346 20230619_1883_Aki_TMTPro18x_K_F4 127.78 104.86 110290 91672 103470 92907 101470 124980 111050 107930 117930 146730 123420 122670 152720 117850 122150 160270 131320 133810 101940 83951 105590 94218 105930 123570 111660 112430 120180 145450 127640 125470 153400 124010 125470 158780 125570 127360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 218780000 9585 3250 9056 18288;18289 14673;14674 14674 2 9606 Homo sapiens 0.015761679202796586 GCVITISGR Unmodified 961.5015 0.50150012 3205 O00154-4;O00154-6;O00154-7;O00154;O00154-5;B4DUX0;K7EKP8 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 1.5 0.5 1 1 42.733 42.774 2 0.00036135 11102 20230619_1881_Aki_TMTPro18x_K_F2 138.54 75.999 419060 307530 332480 390580 276530 313690 340840 353920 445410 447790 463460 541830 588430 493900 307610 694530 726250 660580 386580 282360 344420 386610 293860 323990 343310 361470 448700 450390 480220 544350 583700 521570 342940 691550 690370 628020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 406120000 9586 3205 9057 18290;18291 14675;14676 14676 2 9606 Homo sapiens 0.019209433943274234 GCVNYEGADR Unmodified 1139.4666 0.46657118 4175;4496 Q7Z5L9-2;Q7Z5L9;Q9H1B7 IRF2BP2;IRF2BPL Interferon regulatory factor 2-binding protein 2;Interferon regulatory factor 2-binding protein-like no no 0 0 0 2 0 1 34.269 34.326 2 0.085961 7419 20230619_1881_Aki_TMTPro18x_K_F2 59.426 48.275 11983 7031.8 11687 15212 13754 12250 14100 14525 17057 13877 16360 21586 15842 14689 15489 11145 17543 20985 11059 6509.8 11946 14634 14112 12658 14288 14674 17170 14291 16832 21297 16177 15196 15846 11822 16789 19815 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14670000 9587 4175;4496 9058 18292 14677 14677 1 9606 Homo sapiens -0.0975834420432875 GCVVGTK Unmodified 719.36361 0.36360966 3567;2399 B3KS36;P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;Q49AJ9 RPL3;rpl3 60S ribosomal protein L3 no no 0 0 0 7.5 0.5 1 1 37.744 37.73 2 0.0092557 8553 20230619_1888_Aki_TMTPro18x_K_F8 119.57 44.255 111560 44391 134290 141960 204320 191660 157760 209930 138170 88315 146810 139350 118980 130210 141230 40667 187730 139620 103000 41541 135580 135820 205030 190270 161320 209770 142010 97310 149030 138820 123610 129880 145190 48204 178840 131740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77703000 9588 2399;3567 9059 18293;18294 14678;14679 14679 2 9606 Homo sapiens -0.00729760134299795 GCWDSIHVVEVQEK Unmodified 1684.7879 0.78790532 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;B1AK85 CAPZB F-actin-capping protein subunit beta yes no 0 0 0 5 0.816 1 1 1 51.812 51.872 3 1.0556E-06 14575 20230619_1885_Aki_TMTPro18x_K_F5 124.07 106.37 52829 44232 51800 61852 49407 52380 54749 57373 54516 69765 68630 87358 69991 67950 61981 81512 86068 97620 48848 40633 52725 60873 51624 53799 54924 58622 56189 70323 69938 87159 71091 71423 64609 82530 82196 92507 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223040000 9589 1434 9060 18295;18296;18297 14680 14680 1 9606 Homo sapiens -0.027097116847016878 GCYIGQELTAR Unmodified 1266.6027 0.60267073 2645 B4E1G9;Q5T440 IBA57 Putative transferase CAF17, mitochondrial yes no 0 0 0 6 0 1 46.356 46.439 2 0.0011894 12334 20230619_1886_Aki_TMTPro18x_K_F6 99.568 79.646 35376 32571 35607 40256 40873 45572 52191 42100 45901 44751 45687 41591 47537 36807 41396 44683 43651 48039 32738 29871 36273 40086 42312 45600 51738 43348 47110 44992 46944 42218 48138 38571 42347 44954 41773 45576 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35190000 9590 2645 9061 18298 14681 14681 1 9606 Homo sapiens -0.01996649693683139 GDAASSPAPAASVGSSQGGAR Unmodified 1799.8398 0.83981755 1019 E7EXA6;Q96S08;A0A0D9SF58;Q8WVB6;Q8WVB6-2;F8WCC1;B4DEY3 CHTF18;RUVBL Chromosome transmission fidelity protein 18 homolog yes no 0 0 0 4 0 1 34.643 34.694 3 1.0258E-16 7398 20230619_1883_Aki_TMTPro18x_K_F4 162.81 151.12 8315 4725.3 6029.1 10783 13077 11219 11628 10253 14111 10772 9960.1 11304 12437 8942.4 10870 10349 11816 13662 7656.5 4379.5 6447.7 10377 12970 11287 11869 10562 14069 10882 10532 11364 12532 9390.4 11130 10563 11309 12934 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17336000 9591 1019 9062 18299 14682 14682 1 9606 Homo sapiens -0.028108767372714283 GDAAVRDELMAAVR Unmodified 1472.7406 0.7405612 3908 Q15008;Q15008-4;C9J7B7 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 1 4.5 0.5 1 1 50.869 50.923 3 1.2724E-08 14118 20230619_1885_Aki_TMTPro18x_K_F5 155.43 107.81 210900 181270 210620 223420 204790 234010 224060 217110 261050 271740 232440 240260 273690 220210 245580 286150 230850 248270 195070 166280 213980 222310 213800 235450 225970 224450 262940 270760 241710 244620 276580 231340 249640 284280 221140 236140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 523240000 9592 3908 9063 18300;18301 14683 14683 1 9606 Homo sapiens 0.023100538349353883 GDADMYDLPK Unmodified 1123.4856 0.48557529 3617 P50402;A0A804HIV7;Q5HY57;A0A804HLA2 EMD Emerin yes no 0 0 0 3.5 0.5 1 1 51.42 51.468 3 0.015866 14794 20230619_1882_Aki_TMTPro18x_K_F3 64.82 57.939 144080 115880 138420 132010 123050 176540 139230 142870 214660 155570 159770 158510 176780 155300 150120 189190 170140 200730 133170 106240 140860 132600 129950 174270 141770 148580 212050 156830 167200 160750 178700 162100 154450 190090 162810 190420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102410000 9593 3617 9064 18302;18303 14684 14684 1 9606 Homo sapiens -0.07122807633277262 GDADQASNILASFGLSAR Unmodified 1791.8751 0.87514042 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 0 5.33 3.09 1 1 1 63.585 63.604 3 2.6993E-30 19954 20230619_1880_Aki_TMTPro18x_K_F1 225.01 206.18 119460 114220 140640 143790 129490 145140 140580 154750 139630 140890 142280 146170 158860 146060 154090 162480 153530 163810 110740 104760 140950 142830 135610 146880 141180 157030 142470 143270 146650 148190 161440 151490 156790 163080 146970 155540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3496499999.9999995 9594 1059 9065 18304;18305;18306 14685;14686;14687 14685 3 9606 Homo sapiens 0.01087785790559792 GDAHECFVSPVAK Unmodified 1415.6503 0.65034921 824 A0A087WVM4;B7ZM99;Q6UB35;H0Y327;Q5JYA8;Q5JYA3;Q6UB35-2 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes no 0 0 0 4.5 0.5 1 1 43.524 43.586 3 0.00079686 11032 20230619_1885_Aki_TMTPro18x_K_F5 88.075 73.389 207900 154240 189820 202860 181110 201120 199610 198590 219640 245930 249390 245170 267830 249200 220970 298320 287280 319830 191990 141660 194260 200840 189370 203450 200900 204350 223970 245980 255220 249170 270740 259480 229620 299950 274450 303430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 156460000 9595 824 9066 18307;18308 14688;14689 14688 2 9606 Homo sapiens -0.040849954934856214 GDAMIMEETGK Oxidation (M) 1196.5053 0.50532445 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;F8VR77;F8W0A3;H0YIN7 PA2G4 Proliferation-associated protein 2G4 yes no 0 1 0 2.5 0.5 2 2 45.855 45.933 2;3 0.00058879 12529 20230619_1881_Aki_TMTPro18x_K_F2 109.66 97.136 243250 194890 232900 267600 268840 293370 285440 268480 328130 301630 314460 301130 344560 273920 285700 361710 343170 325910 224820 179020 238210 264490 276870 294100 288100 276950 331310 303140 324460 304980 347840 288140 295140 359850 327660 309990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 455710000 9596 654 9067 18309;18310;18311;18312 14690;14691 14690 396;397 2 9606 Homo sapiens -0.08506799684846555 GDAMIMEETGK 2 Oxidation (M) 1212.5002 0.50023907 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;F8VR77;F8W0A3;H0YIN7 PA2G4 Proliferation-associated protein 2G4 yes no 0 2 0 2 0 1 40.624 40.697 3 0.018927 10123 20230619_1881_Aki_TMTPro18x_K_F2 60.49 50.802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9597 654 9067 18313 14692 14692 396;397 1 9606 Homo sapiens -0.09751103547432649 GDASKEDIDTAMK Unmodified 1379.6239 0.62385968 1026 Q16836-2;Q16836-3;Q16836;E9PF18;A0A0D9SFP2;B3KTT6;A0A140VK76;B2RB06;A0A804HLB5;A0A1W2PNM1;A0A1W2PQ78 HADH Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes no 0 0 1 3.5 0.5 1 1 44.608 44.666 3 0.0022579 11569 20230619_1883_Aki_TMTPro18x_K_F4 76.588 57.01 187390 152030 201750 184930 247610 240350 233190 211430 261170 232930 296900 261540 231720 203840 271010 218460 265080 200320 173380 139470 204310 184830 252880 238280 236820 218600 265710 235190 299920 262320 240430 212850 274250 218520 253240 190690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210310000 9598 1026 9068 18314;18315 14693 14693 1 9606 Homo sapiens -0.05076729175470973 GDATVSYEDPPTAK Unmodified 1449.6624 0.66235368 1025 H7BY36;A0A0D9SFL3;B0QYK0;C9JGE3;Q01844-2;Q01844-6;Q01844-3;Q01844;Q01844-5 EWSR1 RNA-binding protein EWS yes no 0 0 0 2.5 0.5 1 1 44.735 44.813 3 1.257E-08 11719 20230619_1882_Aki_TMTPro18x_K_F3 150.49 136.23 533790 413890 495430 545050 550870 621460 596580 613320 676410 571240 640630 667350 666110 600330 616950 694160 781140 698690 493120 380070 507640 540590 569280 622300 601370 625980 682810 582670 660300 671030 677130 626210 637660 696140 745230 663870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 778160000 9599 1025 9069 18316;18317 14694;14695 14695 2 9606 Homo sapiens -0.044491002692893744 GDCLMISMITVR Oxidation (M) 1410.6669 0.66692725 4807 yes yes 0 1 0 4 0 1 30.218 30.285 4 0.092962 5662 20230619_1883_Aki_TMTPro18x_K_F4 45.077 14.685 + 48294 7815.5 26948 42038 52217 19964 47690 52258 48281 50829 60259 59298 67226 53563 26168 74181 36757 55274 44269 7521.8 29578 39294 51862 22632 48358 51118 49653 51655 61494 59682 66402 56506 28196 73013 35194 52632 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192910000 9600 4807 9070 18318 14696 14696 2918 1 9606 Homo sapiens -0.02197953923428031 GDDALEKR Unmodified 902.44576 0.44575938 183 A0A024R222;B4DHQ3;Q9Y617;B4DHX7 PSAT1 Phosphoserine aminotransferase yes no 0 0 1 3 0 1 34.723 34.784 3 0.051454 7480 20230619_1882_Aki_TMTPro18x_K_F3 44.753 15.377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9601 183 9071 18319 14697 14697 1 9606 Homo sapiens -0.009365665216591879 GDDEEWNEVLNK Unmodified 1446.6263 0.62630252 4491 Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 yes no 0 0 0 2 0 1 56.926 56.942 3 1.4348E-05 17374 20230619_1881_Aki_TMTPro18x_K_F2 130.1 113.22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9602 4491 9072 18320 14698 14698 1 9606 Homo sapiens -0.07914557446156323 GDDGIFDDNFIEER Unmodified 1640.6954 0.69544472 3277 O60493;O60493-2;O60493-4 SNX3 Sorting nexin-3 yes no 0 0 0 1 0 1 60.628 60.628 2 0.024021 18741 20230619_1880_Aki_TMTPro18x_K_F1 68.355 43.501 39896 35346 40562 44879 38562 50848 42605 40991 47333 58455 52577 49336 59234 54247 51064 65430 56567 62262 36915 32429 41154 44603 40388 50721 42883 43026 48232 57869 53965 50683 59883 56378 52456 65352 54109 59149 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50155000 9603 3277 9073 18321 14699 14699 1 9606 Homo sapiens -0.09927518217227771 GDDLLPAGTEDYIHIR Unmodified 1783.8741 0.87407779 3166 Q6IAV3;K7EM18;P41567;Q6FG85;Q53F41;O60739 SUI1;EIF1;GC20;EIF1B Eukaryotic translation initiation factor 1;Eukaryotic translation initiation factor 1b yes no 0 0 0 3.5 0.5 1 1 56.221 56.243 3 2.6382E-06 16714 20230619_1883_Aki_TMTPro18x_K_F4 116.58 102.91 72896 63588 64769 74098 71025 75112 71202 82575 106840 70483 71576 72519 76054 60259 75152 95575 82231 79951 67370 58294 66612 73998 73347 76064 72884 83493 105320 72000 75299 73185 77438 64423 76941 94535 78594 76112 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 427960000 9604 3166 9074 18322;18323 14700 14700 1 9606 Homo sapiens 0.013495714216787746 GDDLQAIK Unmodified 858.4447 0.44469675 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;D3DPI2;G3V2D6;B4DQQ2;P07910-3;G3V5V7;Q6PKD2;P0DMR1;A0A0G2JNQ3;A0A0G2JPF8;B7ZW38;B2RXH8;O60812 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL3;HNRNPCL2;HNRNPCL1 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 0 0 0 4 0 1 46.228 46.271 2 0.00041272 12279 20230619_1883_Aki_TMTPro18x_K_F4 137 60.105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9605 2226 9075 18324 14701 14701 1 9606 Homo sapiens 0.009812191094283662 GDDLQAIKK Unmodified 986.53966 0.53965977 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;G3V2D6;B4DQQ2;P07910-3;G3V5V7 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 1 6.5 0.5 1 1 44.341 44.428 3 0.0039655 11111 20230619_1887_Aki_TMTPro18x_K_F7 81.338 42.316 173180 112340 165380 201780 191730 218550 195940 214800 306340 220330 249450 298670 303940 259260 216400 271890 367010 399820 159870 103640 169270 196450 197460 219470 200690 219850 303320 224950 261180 298180 304520 269570 230200 279970 349930 378270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 782980000 9606 2226 9076 18325;18326 14702 14702 1 9606 Homo sapiens 0.04585152580614249 GDDLSTAILK Unmodified 1031.5499 0.5498901 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;A0A7P0T8Q5;A0A7P0TAQ1;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;A0A7P0TBK7;A0A7P0Z4D1;A0A7I2YQJ0 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 0 4.5 0.5 1 1 54.398 54.44 3 0.00057419 15596 20230619_1885_Aki_TMTPro18x_K_F5 98.048 51.89 197630 143120 178570 188760 168650 213160 192680 194710 244830 224310 223060 255860 277970 231910 219300 303150 280910 318580 182470 131460 182930 187170 176950 213180 194520 201000 245630 226150 232460 257520 279220 243810 227910 304080 268440 302290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 481160000 9607 3656 9077 18327;18328 14703;14704 14704 2 9606 Homo sapiens 0.03537715515176387 GDDQLSGAQQWMTK Unmodified 1563.6988 0.69875596 1087 A0A0S2Z470;Q96FT4;A0A0S2Z456;Q92733;H0YE12;H0Y679 PRCC Proline-rich protein PRCC yes no 0 0 0 6 0 1 54.712 54.789 3 0.0017033 15963 20230619_1886_Aki_TMTPro18x_K_F6 72.523 56.998 51329 40948 48977 46190 47466 53951 52917 45746 56079 51662 53906 51481 56255 46995 54358 55309 50018 58610 47437 37540 49910 46336 49583 53789 53133 47481 56859 51910 55506 52131 57235 49077 55078 55631 47958 55602 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49929000 9608 1087 9078 18329 14705 14705 1 9606 Homo sapiens -0.06054546644236325 GDEAEAEPEPELA Unmodified 1355.5729 0.57286997 2606 H0YED7;B4DVZ5;Q92791 LEPREL4 Synaptonemal complex protein SC65 yes no 0 0 0 1 0 1 49.084 49.084 2 0.00030699 14003 20230619_1880_Aki_TMTPro18x_K_F1 104.2 95.734 15029 12602 16971 13246 14875 19642 19452 18099 18569 19099 18144 22056 22651 19128 20352 23898 22037 25599 13914 11544 17031 13423 15752 19336 19322 18620 18960 19337 18864 22151 22866 20082 20849 24022 21093 24283 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181920000 9609 2606 9079 18330 14706 14706 1 9606 Homo sapiens -0.0906935494863319 GDECELLGHSK Unmodified 1243.5503 0.55030081 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 2.5 0.5 1 1 41.457 41.526 3 0.01619 10493 20230619_1881_Aki_TMTPro18x_K_F2 63.473 48.597 47980 41261 46387 53474 56082 65300 60845 55110 73603 55826 68097 73785 69739 55405 74709 57135 63256 65412 44368 37868 47454 53132 57658 64885 61437 57051 73968 56966 70257 73434 71315 57864 75151 57917 60648 62033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44663000 9610 1417 9080 18331;18332 14707 14707 1 9606 Homo sapiens -0.06173232827291031 GDECGLALGR Unmodified 1046.4815 0.48149296 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 3 0 1 41.809 41.872 2 1.0382E-06 10395 20230619_1882_Aki_TMTPro18x_K_F3 138.4 118.61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9611 3654 9081 18333 14708 14708 1 9606 Homo sapiens -0.039888523363288186 GDEELDSLIK Unmodified 1117.5503 0.55028404 3424 Q71UI9;P0C0S5;C9J0D1;A0A494C189;Q71UI9-3;Q71UI9-4;Q71UI9-2;C9J386 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A yes no 0 0 0 2.2 0.748 1 2 2 56.855 56.876 2;3 2.9529E-05 17204 20230619_1880_Aki_TMTPro18x_K_F1 182.4 101.96 4995300 3789100 4385600 5179300 4304400 6309300 5413200 5374500 6159900 6203300 6163500 7452300 4317400 8240600 2562300 10442000 3006800 8395700 4612300 3481200 4511800 5128200 4521600 6267300 5416700 5577800 6232200 6266100 6247700 7539800 4413100 8564700 2708500 10320000 2909900 7976200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5828400000 9612 3424 9082 18334;18335;18336;18337;18338 14709;14710;14711 14709 3 9606 Homo sapiens -0.0037890955561579176 GDFCIEVGK Unmodified 1023.4695 0.46953129 3842 Q9NUF9;Q13232;H3BPR2 c371H6.2;NME3 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase 3 yes no 0 0 0 5 0 1 53.438 53.51 3 0.025804 15255 20230619_1885_Aki_TMTPro18x_K_F5 53.683 25.284 45566 45044 48958 42803 45236 52788 52320 51841 54041 47419 55925 58711 59241 59584 60071 64290 63465 66180 42214 41205 49364 43594 47476 52620 52414 52906 55003 48522 57472 59148 60462 61634 61281 64631 60709 62829 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16503000 9613 3842 9083 18339 14712 14712 1 9606 Homo sapiens -0.04126469079483286 GDFCIQVGR Unmodified 1050.4917 0.49166372 3490;1446;3276 A0A384MTW7;P15531;P15531-2;E7ERL0;O60361;Q32Q12;P22392-2;J3KPD9;Q6FHN3;P22392 NME1;NME2P1;NME1-NME2;NME2 Nucleoside diphosphate kinase A;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 0 0 5.4 2.42 1 1 1 1 1 48.083 48.144 2 0.00083402 13055 20230619_1886_Aki_TMTPro18x_K_F6 135.83 72.265 2761500 2364300 2346000 2466700 2153900 2433100 2582900 2562000 2674900 3255100 3170600 3815400 1667800 3376800 1129500 5002100 1482200 3453800 2551000 2165500 2415500 2483800 2265200 2467100 2583300 2627500 2740800 3268300 3166700 3834100 1737900 3571100 1200800 4902200 1428400 3289600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 26669000000 9614 1446;3276;3490 9084 18340;18341;18342;18343;18344 14713;14714;14715;14716 14714 4 9606 Homo sapiens -0.031562446110683595 GDFDENLNYPEQK Unmodified 1567.6791 0.67906638 1430 Q5JPE4;A0A384MR19;F8VXU5;Q9UBQ0;Q9UBQ0-2 DKFZp667O202;VPS29 Vacuolar protein sorting-associated protein 29 yes no 0 0 0 3 0.816 1 1 1 51.104 51.153 3 6.6098E-08 14948 20230619_1881_Aki_TMTPro18x_K_F2 153.49 137.35 263540 217180 260740 266690 240240 285320 295040 289330 311600 328110 309060 349910 348570 322420 329050 397540 354940 381570 243680 199240 264870 265560 252760 287150 294860 296360 316590 330150 319290 353260 353790 337310 336760 397210 339540 362490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 906540000 9615 1430 9085 18345;18346;18347 14717;14718 14717 2 9606 Homo sapiens -0.08206599383333923 GDFETIK Unmodified 808.39668 0.39668393 4376 V9HWH0;Q96KB5;Q96KB5-2;E5RFX4 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase yes no 0 0 0 3.5 0.5 1 1 47.159 47.22 2 0.0072494 12891 20230619_1882_Aki_TMTPro18x_K_F3 126.67 73.201 626250 452960 496640 615740 574270 660380 555690 543040 745050 614390 669530 606160 724890 586430 571760 648500 684480 607700 577660 416210 517140 608660 590760 661550 567160 564980 744990 617370 692250 615320 730680 608960 590700 648280 653280 577910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 231400000 9616 4376 9086 18348;18349 14719;14720 14719 2 9606 Homo sapiens -0.015178548106177914 GDFIALDLGGSSFR Unmodified 1453.7201 0.72014333 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;A0A994J428;B3KRA9;A0A994J4Q4;A0A994J6R6;A0A994J4P6;A0A994J4A4;B1AR62;A0A994J6Q7 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 7 0 1 62.615 62.651 3 0.048638 19046 20230619_1887_Aki_TMTPro18x_K_F7 44.691 34.737 44156 46599 58253 48980 47061 57036 72013 51237 70724 69489 60402 61802 70941 48561 55534 92212 89043 80571 41012 42654 57805 49418 50410 56945 71070 53281 71729 69026 62925 62684 71310 52883 58791 91179 84813 76681 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 226550000 9617 43 9087 18350 14721 14721 1 9606 Homo sapiens 0.011432064468181125 GDFLALDLGGTNFR Unmodified 1494.7467 0.74669243 2017 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9;A0A024R7R1;Q59H08;P52790 DKFZp686M1669;HK2;HK3 Hexokinase;Hexokinase-2;Hexokinase-3 yes no 0 0 0 7 0 1 63.047 63.08 3 0.048638 19189 20230619_1887_Aki_TMTPro18x_K_F7 44.691 32.465 73315 56527 68775 88884 60286 88413 73697 83460 98649 102460 82066 98279 111590 99770 76907 127220 111560 127800 67733 52017 70260 87022 63879 89228 74325 86100 98523 102420 86343 99991 111390 104310 81010 127270 106510 121320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37509000 9618 2017 9088 18351 14722 14722 1 9606 Homo sapiens 0.01910895338141927 GDFTGHGER Unmodified 974.42061 0.42060727 1639 A0A6Q8PH68;W5ZR30;Q9UGU0-2;Q9UGU0 TCF20 Transcription factor 20 yes no 0 0 0 2 0 1 27.987 28.061 3 0.00012685 5023 20230619_1881_Aki_TMTPro18x_K_F2 135.43 115.14 21794 8954.7 22289 18147 26996 25061 19816 24039 22026 20596 30828 36177 24248 24204 31635 14796 29958 28985 20093 8299.4 22634 17656 27441 24788 20496 24526 22650 21462 30977 35568 25322 24856 31850 15875 28673 27384 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8809000 9619 1639 9089 18352 14723 14723 1 9606 Homo sapiens -0.06762621324230622 GDFYTAHGEDALLAAR Unmodified 1705.806 0.80599822 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;A0A2R8Y7S8;V9H068;B4DN49;V9H023;V9H0D5;V9H0B2;V9H015;V9H062;Q0ZAJ2 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 4.5 1.12 1 1 1 1 49.769 49.835 3 2.2984999999999997E-19 13885 20230619_1883_Aki_TMTPro18x_K_F4 204.52 176.87 248180 180290 233150 253170 554740 244360 223450 205900 284270 274910 234540 268010 285520 387900 276440 290260 260310 277430 229210 165720 242430 249460 539150 247920 246370 214990 284890 274230 245500 276260 290340 390340 280450 292650 249340 263580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 457320000 9620 3585 9090 18353;18354;18355;18356 14724 14724 1 9606 Homo sapiens -0.018672534383085804 GDGARPTTHCDEVLR Unmodified 1682.7795 0.7794659 2884 Q6NXR4;E5RIH5 TTI2 TELO2-interacting protein 2 yes no 0 0 1 3 0 1 29.689 29.783 4 1.9803E-10 5501 20230619_1882_Aki_TMTPro18x_K_F3 159.88 135.69 19303 17145 19139 22314 28113 21856 20235 22469 25806 26750 29224 28699 26806 22281 21504 29859 33257 30736 17857 15734 19594 22100 28217 22176 21042 23024 26126 26857 29702 28833 27191 23599 22654 29906 31689 29193 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34946000 9621 2884 9091 18357 14725 14725 1 9606 Homo sapiens -0.034612656013223386 GDGEVLEEIVTK Unmodified 1287.6558 0.65581174 997 Q66PJ3-7;B2RE15;A0A8C8KBE9;F8WCT1;A0A0C4DG62;Q8TEM4;H7BZV4;F5GYV5;Q66PJ3-9;Q66PJ3-10;Q66PJ3;Q66PJ3-4;Q66PJ3-3;Q66PJ3-2;Q66PJ3-1;A0A0C4DH18;Q66PJ3-5;F8WEP2 ARL6IP4;FLJ00169 ADP-ribosylation factor-like protein 6-interacting protein 4 yes no 0 0 0 2 0 1 60.308 60.32 2 0.00046582 18745 20230619_1881_Aki_TMTPro18x_K_F2 126.19 83.325 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9622 997 9092 18358 14726 14726 1 9606 Homo sapiens 0.023490065699888873 GDGPICLVLAPTR Unmodified 1367.7231 0.72312022 1328;3137 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7;P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3QRQ7;J3KRZ1 DDX17;DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 no no 0 0 0 4.25 3.27 2 1 1 58.335 58.36 2;3 2.2752E-07 17770 20230619_1880_Aki_TMTPro18x_K_F1 153.95 122.64 372230 331260 337640 356350 324340 416780 389000 379680 438070 280580 253340 191870 242680 218320 280720 300250 263270 191570 344110 303440 345870 358730 340260 415950 389870 387790 435670 286550 267870 200140 250000 228520 283920 294320 251570 183370 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4305500000 9623 1328;3137 9093 18359;18360;18361;18362 14727;14728;14729 14727 3 9606 Homo sapiens 0.05396758299912108 GDGPVQGIINFEQK Unmodified 1500.7573 0.75725712 3372 V9HWC9;P00441;W8Q444;A1YYW4 HEL-S-44;SOD1;SOD-1 Superoxide dismutase [Cu-Zn] yes no 0 0 0 6.25 0.829 1 1 2 58.915 58.97 2;3 7.3538E-22 17657 20230619_1886_Aki_TMTPro18x_K_F6 274 234 547380 495900 497130 634200 707170 671920 587630 547900 717370 716250 874940 915790 863970 816590 758830 828520 886190 948290 506100 454970 512980 629250 714180 674100 603430 573210 729820 721140 889940 917100 877660 845890 780910 838990 847100 899200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1699499999.9999998 9624 3372 9094 18363;18364;18365;18366 14730;14731;14732 14730 3 9606 Homo sapiens 0.02690877992586138 GDGVTEIR Unmodified 845.4243 0.42429566 839 A0A087WWM0;O43617-2;O43617;A0A087WYS5 TRAPPC3 Trafficking protein particle complex subunit 3 yes no 0 0 0 1.5 0.5 1 1 35.558 35.587 2 0.0018049 7906 20230619_1881_Aki_TMTPro18x_K_F2 136.8 29.61 72001 35159 68654 77194 86244 102120 76618 79956 110020 88676 105230 120920 124150 103810 91920 77935 144720 138790 66384 32592 70339 74720 88061 100770 78846 83449 109950 90205 109070 120590 124620 106370 96854 82190 137910 131200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150300000 9625 839 9095 18367;18368 14733 14733 1 9606 Homo sapiens -0.0045995155038554 GDGVVLVAPPLR Unmodified 1191.6976 0.69755739 3716 P62310;B2R5H5 LSM3 U6 snRNA-associated Sm-like protein LSm3 yes no 0 0 0 7.67 0.471 1 2 54.304 54.372 2;3 4.4903E-05 15531 20230619_1887_Aki_TMTPro18x_K_F7 138.66 106.19 183730 158430 164940 196610 200410 246180 181060 179390 276230 209690 211850 209790 220590 203320 208660 245400 244960 257960 169800 145340 169850 195950 205280 243580 186560 188710 273310 210570 220730 212820 224470 212130 214600 246520 234110 244830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 754380000 9626 3716 9096 18369;18370;18371 14734;14735 14734 2 9606 Homo sapiens 0.10937651839844875 GDHAGVLK Unmodified 795.4239 0.42390173 1426 A0A384MEG1;Q16658;B3KTA3;B3KTM9 FSCN1 Fascin yes no 0 0 0 5.5 1.12 1 1 1 1 34.51 34.575 3 0.00059364 7439 20230619_1886_Aki_TMTPro18x_K_F6 132.08 77.879 306630 58810 318220 320740 477690 338170 359680 431120 415910 310330 510020 520430 481370 446250 414340 233530 482450 441490 282270 56473 324440 302190 478920 342640 371520 430630 423750 326490 517570 515990 489170 451500 425200 250470 460660 417270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2147399999.9999998 9627 1426 9097 18372;18373;18374;18375 14736;14737 14737 2 9606 Homo sapiens 0.018006735204266988 GDHVIGIVTAK Unmodified 1108.6241 0.6240581 4577 Q9NQT5;Q9NQT5-2;Q9NYS3 EXOSC3;PNAS-3 Exosome complex component RRP40 yes no 0 0 0 7.5 0.5 1 1 45.678 45.741 3 7.466E-05 11778 20230619_1888_Aki_TMTPro18x_K_F8 123.67 107.04 81273 17448 66994 75026 76272 61979 77166 76506 94226 91026 97334 99325 114060 86946 69569 122270 94426 107760 74696 16577 69399 70758 78398 63941 78285 77566 95172 91461 100400 100090 113710 91980 73198 121330 90198 102450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90850000 9628 4577 9098 18376;18377 14738 14738 1 9606 Homo sapiens 0.07409103397367289 GDIDHVK Unmodified 782.39227 0.39226725 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 3 0 1 35.557 35.614 3 0.012301 7785 20230619_1882_Aki_TMTPro18x_K_F3 89.142 50.904 128600 53039 180900 185380 275650 230940 184220 259060 176850 108160 236510 297820 154210 188450 256520 67986 250700 235690 118950 49737 180750 176700 275600 230570 191130 258530 182570 123050 236860 289680 165210 191450 257650 80299 239820 222140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114480000 9629 1723 9099 18378 14739 14739 1 9606 Homo sapiens -0.007633192335219974 GDIFLVR Unmodified 818.46504 0.46503826 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 0 7 0.816 1 1 1 52.752 52.826 2 0.0075423 14804 20230619_1887_Aki_TMTPro18x_K_F7 124.37 33.388 936320 780820 824230 988910 915270 1124900 999050 1014000 1286600 1155500 1087400 1209900 1278000 1036500 964420 1528200 1454300 1339000 865030 716520 849150 983050 947390 1124300 1011200 1047300 1286600 1162200 1133800 1220200 1283800 1100800 1016300 1515400 1385900 1274200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 923880000 9630 3656 9100 18379;18380;18381 14740;14741 14740 2 9606 Homo sapiens 0.04854434559899801 GDIGINR Unmodified 743.3926 0.3926016 923 A0A0A0MQW0;A0A0A0MR39;A0A087WUT0;A0A024R5Q6;A0A0C4DGV1;H0YN19 MYEF2 yes no 0 0 0 4.5 0.5 1 1 36.152 36.22 2 0.006446 8012 20230619_1883_Aki_TMTPro18x_K_F4 132.96 43.057 245300 155610 288000 298570 247890 253770 261690 292860 280320 249430 350200 349860 336810 306880 312230 177540 395800 344880 226830 143720 288410 289020 260740 260730 263950 295410 287050 257430 355430 348930 343160 311250 321730 190360 377540 325990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144380000 9631 923 9101 18382;18383 14742;14743 14742 2 9606 Homo sapiens 0.010641004863373382 GDIGQSTDDDSAPLVHCVR Unmodified 2040.9171 0.91708159 1706 D3DVR8;A0A7P0TA78;A0A7P0TAC5;P42858;Q59FF4;A0A7P0Z417;A0A7P0TAN5 HD;HTT Huntingtin yes no 0 0 0 2 0 1 43.122 43.203 3 5.8861E-07 11305 20230619_1881_Aki_TMTPro18x_K_F2 107.41 101.25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9632 1706 9102 18384 14744 14744 1 9606 Homo sapiens -0.061740265832440855 GDIIGVQGNPGK Unmodified 1153.6091 0.60913632 3911 Q15046;Q15046-2;H3BVA8;J3KRL2;H3BPV7 KARS Lysine--tRNA ligase yes no 0 0 0 6.5 0.5 1 1 46.968 47.054 2 0.00056028 12219 20230619_1887_Aki_TMTPro18x_K_F7 131.45 101.88 76529 57120 64862 67624 77161 89934 81379 76003 101950 94547 94717 102380 102220 85890 83694 110650 102110 102690 70636 52404 67072 67722 79386 88924 82415 79101 102410 94830 97878 103010 103220 90436 86598 110270 97526 97616 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34313000 9633 3911 9103 18385;18386 14745 14745 1 9606 Homo sapiens 0.038476115293633484 GDILVVATGQPEMVK Unmodified 1555.828 0.82797922 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;A0A8V8TKR5;A0A8V8TKS0;A0A8V8TL46;A0A8V8TMA9 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 7 0 1 59.949 59.995 3 0.00034725 17814 20230619_1887_Aki_TMTPro18x_K_F7 89.466 69.889 31225 24163 27134 27004 27297 36395 30700 27448 41383 30504 35575 35033 37157 37947 32219 46852 45952 55526 28831 22153 27913 27163 28511 35875 31076 28750 41280 30850 36832 35498 37703 39504 33693 47371 43900 52612 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8487700 9634 2973 9104 18387 14746 14746 1 9606 Homo sapiens 0.07229834985832895 GDINILLIGDPSVAK Unmodified 1523.8559 0.85590853 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 7.5 0.5 1 1 63.119 63.148 3 1.279E-07 19253 20230619_1887_Aki_TMTPro18x_K_F7 126.07 107.29 438140 398490 391990 425360 357800 441460 481520 464840 471030 535760 507580 460760 584010 461250 490090 550710 544670 541890 405070 364970 401840 427790 378000 445780 478040 475150 482300 535250 522090 471360 588910 480780 503340 551330 520590 514790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 802010000 9635 1104 9105 18388;18389 14747;14748 14747 2 9606 Homo sapiens 0.11493481237630476 GDINVCIVGDPSTAK Unmodified 1544.7505 0.75045718 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 5.5 0.5 1 1 53.566 53.64 2;3 1.9095E-05 15317 20230619_1885_Aki_TMTPro18x_K_F5 137.84 101.45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9636 3892 9106 18390;18391 14749;14750 14749 2 9606 Homo sapiens -0.00012802950323020923 GDINVLLCGDPGTAK Unmodified 1528.7555 0.75554256 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 5.5 0.5 1 1 57.938 58.001 3 1.5005E-10 17261 20230619_1886_Aki_TMTPro18x_K_F6 151.38 124.94 108750 82883 101940 109830 92625 106970 109940 102260 101600 145490 145840 154090 163190 143740 142730 167220 153710 170310 100460 76121 104030 108650 97422 108270 109640 106000 105940 144910 148370 155660 165040 149830 146250 167770 147080 161660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 937550000 9637 2702 9107 18392;18393 14751 14751 1 9606 Homo sapiens 0.0123150091228581 GDIPPGCAAYGFVCDGTR Unmodified 1911.8244 0.82436718 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4;Q05C05;P51610-3 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 6 0 1 53.763 53.841 3 5.4133E-05 15554 20230619_1886_Aki_TMTPro18x_K_F6 92.31 88.531 62725 52102 57873 63977 60973 71081 65748 62665 78892 75373 76962 72040 88664 71987 69102 99954 87050 90643 57969 47797 59281 63719 63275 71142 66419 64950 79564 75424 79512 73357 89186 75746 71775 99374 83140 86179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72589000 9638 1331 9108 18394 14752 14752 1 9606 Homo sapiens -0.09507202850318208 GDIVDIK Unmodified 758.41742 0.41741937 3593 Q6IAX2;P46778;M0R181;G3V1B3;Q59GK9 RPL21 60S ribosomal protein L21 yes no 0 0 0 4.5 0.5 1 1 49.439 49.495 2 0.011157 13724 20230619_1883_Aki_TMTPro18x_K_F4 117.02 35.061 414530 342870 390330 386480 509400 478860 471370 444050 565690 438000 494480 427170 480930 365710 481440 456180 479810 420040 383150 314290 400200 388070 518180 476730 480250 455880 567760 442940 509690 432390 491000 384220 489300 455070 458680 399560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 266820000 9639 3593 9109 18395;18396 14753 14753 1 9606 Homo sapiens 0.028547355690420773 GDLANTFR Unmodified 892.44028 0.44028008 2746 C9JA62;D6W551;Q6UW56-2;Q6UW56;Q6UW56-3 ATRAID;C2orf28 All-trans retinoic acid-induced differentiation factor yes no 0 0 0 5.5 0.5 1 1 43.625 43.711 2 0.0070555 11113 20230619_1886_Aki_TMTPro18x_K_F6 108.74 79.593 109010 85644 106430 117500 127000 164860 128260 138720 162140 138830 149530 162670 152090 137220 148630 162960 172160 168310 100760 78677 108740 116600 130580 162400 130310 143470 162700 141080 154220 163190 155070 143700 152580 163610 164470 159820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126410000 9640 2746 9110 18397;18398 14754 14754 1 9606 Homo sapiens -0.010242453134765128 GDLAYNYR Unmodified 970.45084 0.45084476 4371 Q96JJ7;Q3B7X1;Q96JJ7-2 TMX3 Protein disulfide-isomerase TMX3 yes no 0 0 0 5 0 1 41.131 41.218 2 0.010526 10007 20230619_1885_Aki_TMTPro18x_K_F5 98.523 75 60672 49618 57851 70326 75452 83524 81572 74515 93965 70630 87493 88701 90138 74010 76172 86378 89573 82982 56080 45591 59356 69448 77158 83227 82230 76675 94671 72191 90184 88758 91241 77471 78495 86394 85527 78877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59496000 9641 4371 9111 18399 14755 14755 1 9606 Homo sapiens -0.035562626590490254 GDLENAFLNLVQCIQNK Unmodified 1974.9833 0.98331066 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YL33;H0YM50;B3KRQ1 ANXA2;HEL-S-270 Annexin A2;Annexin yes no 0 0 0 3 0 1 67.004 67.043 3 9.1429E-10 21349 20230619_1882_Aki_TMTPro18x_K_F3 140.84 115.19 1791 2453 2114.2 2694.6 1572.8 2935.9 2489.7 2540.8 3744.4 3390.3 1800.2 6176.6 6110.5 6761 2091 10543 9511 14101 1665.6 2244.7 2118.1 2704.1 1711.9 2939.2 2494.3 2647.6 3672.6 3469.3 2152.6 6162.5 5931.5 7152.3 2654.6 10701 9060.1 13338 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21597000 9642 368 9112 18400 14756 14756 1 9606 Homo sapiens 0.03481834049489407 GDLGAFSR Unmodified 821.40317 0.40316629 3855 Q13526;K7EN45;K7EMU7;B3KUM4 PIN1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 yes no 0 0 0 6 0 1 43.186 43.28 2 1.9479E-05 10900 20230619_1886_Aki_TMTPro18x_K_F6 138.54 81.264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9643 3855 9113 18401 14757 14757 1 9606 Homo sapiens -0.014679168592351743 GDLGIEIPAEK Unmodified 1140.6027 0.60265396 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;Q504U3;A0A024R609;A0A977JB91;Q16715;A0A4D6DDG8;Q16716;B4DPM0;P30613-2;P30613;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;PKLR;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM;Pyruvate kinase PKLR no no 0 0 0 4.22 1.31 1 2 2 2 2 55.847 55.891 2;3 6.5612E-05 16549 20230619_1883_Aki_TMTPro18x_K_F4 164.33 101.87 1570400 1317300 1461300 1550300 1595700 1905400 1800500 1731500 1862500 2189500 2189400 2148400 2379500 1956400 2102400 2507400 2249700 2318400 1451500 1208000 1496400 1551300 1653400 1895700 1805600 1792900 1908700 2186600 2239000 2177000 2408800 2053700 2153100 2499100 2151600 2203800 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 19341000000 9644 370;3451 9114 18402;18403;18404;18405;18406;18407;18408;18409;18410 14758;14759;14760;14761 14760 4 9606 Homo sapiens 0.037976735779921 GDLIGVVEALTR Unmodified 1241.698 0.69795133 1397 A0A384DVU0;Q8IY17-5;Q8IY17-2;Q8IY17-3;Q8IY17 PNPLA6 Neuropathy target esterase yes no 0 0 0 8 0 1 64.963 64.982 3 0.0019443 19948 20230619_1888_Aki_TMTPro18x_K_F8 59.592 38.304 7365.1 7187.6 7744.3 7385 6493.7 8932.7 8706.3 10424 9458.6 8433.8 9801.8 11821 11790 8575.5 9765.9 13173 11879 13133 6821.4 6579.4 7817.6 7469.8 6915.7 8946.6 8679.8 10487 9602.6 8728.5 10141 11741 11866 9199.4 10102 13150 11354 12469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12527000 9645 1397 9115 18411 14762 14762 1 9606 Homo sapiens 0.08677026769009899 GDLLFLTNR Unmodified 1047.5713 0.57129425 710 H0YNX5;H0YNA5;H0YNG3;Q6IAM7;A0A024RC78;Q7Z4Z6;P67812-2;P67812-4;P67812;P67812-3 SEC11A;SPC18;SEC11L1 Signal peptidase complex catalytic subunit SEC11;Signal peptidase I;Signal peptidase complex catalytic subunit SEC11A yes no 0 0 0 3.67 3.09 1 1 1 58.273 58.293 2 0.00026299 17769 20230619_1880_Aki_TMTPro18x_K_F1 142.04 117.27 647710 548590 593990 658240 622460 745110 737180 707770 823080 636350 569350 557160 678790 556770 690770 708140 651820 672430 598640 503110 608830 656890 647980 745870 739010 723780 823240 644980 601060 569520 689820 582510 700160 707150 624180 638980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 927520000 9646 710 9116 18412;18413;18414 14763;14764 14763 2 9606 Homo sapiens 0.049411453345555856 GDLNDCFIPCTPK Unmodified 1535.6748 0.6748494 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A8V8TL46;A0A8V8TMA9;A0A8C8UXK2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 6 0.816 1 1 1 55.451 55.518 3 2.398E-06 16225 20230619_1886_Aki_TMTPro18x_K_F6 115.8 97.666 201280 156180 165680 180700 132310 170090 174590 164150 177010 196790 202980 200650 240610 193790 202750 249800 231760 224490 185780 143230 170870 180370 141460 172660 173730 169060 181330 197240 208670 203400 242510 203100 208690 248570 221410 213520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 628000000 9647 2973 9117 18415;18416;18417 14765;14766 14766 2 9606 Homo sapiens -0.0715610340225794 GDLPGLVR Acetyl (Protein N-term) 867.48142 0.48141661 2718 B8ZZB8;Q96F85-2;Q96F85 CNRIP1 CB1 cannabinoid receptor-interacting protein 1 yes no 1 0 0 2 0 1 53.564 53.592 2 0.00065945 15960 20230619_1881_Aki_TMTPro18x_K_F2 128.75 115.08 4288.5 4362.6 5940 4114.8 4849.5 6565.8 6325.7 5943.5 5277.3 8374.5 7278.3 7194.6 6807.4 7460.2 6326.3 7676.5 7799.3 8313.3 3984.1 3990.2 5871.8 4214.9 5163.9 6438.7 6263.7 6175.6 5529 8292.8 7353.2 7362.6 6951.7 7693.2 6530.5 7743.1 7451.6 7887.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40665000 9648 2718 9118 18418 14767 14767 1 9606 Homo sapiens 0.04237515726003949 GDLSRPEDADTSGPCCEHTQEK Unmodified 2488.0231 0.023079581 4476 Q9BZE9;Q9BZE9-2;Q9BZE9-3;J3QL04;J3QR12;Q9BZE9-4;J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 yes no 0 0 1 2.5 0.5 1 1 35.924 35.981 4 2.9083000000000003E-30 8051 20230619_1881_Aki_TMTPro18x_K_F2 202.17 195.06 97977 71679 87158 106880 88535 99535 112250 100610 118900 108100 121420 116810 122250 102610 116910 134650 128650 135610 90454 65931 89594 104890 92514 101190 111970 102980 120790 109130 124480 117780 124490 108010 119720 134790 123020 128770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 131360000 9649 4476 9119 18419;18420 14768;14769;14770 14768 3 9606 Homo sapiens -0.1614110359073493 GDLSSIR Unmodified 746.39227 0.39226725 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 4 0.816 1 1 1 38.165 38.228 2 0.0026953 8782 20230619_1883_Aki_TMTPro18x_K_F4 160.03 68.768 874490 621890 790430 759810 732360 789740 769450 764660 967080 845890 982910 829280 862380 759550 821670 784850 1058100 769200 807310 570830 808740 756640 766690 795890 780100 785160 974020 850360 1001300 840620 882430 787030 848950 787730 1008100 731820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 933030000 9650 3606 9120 18421;18422;18423 14771;14772 14771 2 9606 Homo sapiens 0.008926807664693115 GDLSTALEVAIDCYEK Unmodified 1782.8346 0.83458074 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJH8;A0A804HLK8 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 5 0.816 1 1 1 64.361 64.394 3 4.6119E-08 19915 20230619_1885_Aki_TMTPro18x_K_F5 125.28 111.37 87715 67585 75937 94144 65148 81969 113660 74525 44558 124920 108970 102780 90205 117280 112150 88738 101310 114730 80988 62103 78114 92683 69734 83615 109620 78133 52159 122740 108010 105720 93926 118880 112940 91191 97135 108650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 398600000 9651 1723 9121 18424;18425;18426 14773 14773 1 9606 Homo sapiens -0.025523166440962086 GDMVTLPAGIYHR Oxidation (M) 1444.7133 0.71328381 4448 Q9BV57;Q9BV57-2;A0A0G2JQN5 ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase yes no 0 1 0 7 0 1 45.838 45.925 3 1.8003E-06 11724 20230619_1887_Aki_TMTPro18x_K_F7 136.7 120.81 57969 43146 63126 58272 62019 70252 61539 65652 75830 66222 71507 60330 77041 58014 64526 70646 76100 74396 53612 39637 63647 57768 64516 70007 62552 67379 76253 66743 73722 61493 77816 60641 66505 70980 72688 70629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115810000 9652 4448 9122 18427 14774 14774 2773 1 9606 Homo sapiens 0.00871570294589219 GDNITLLQSVSN Unmodified 1259.6357 0.635745 3714 P62304;A6NHK2 SNRPE Small nuclear ribonucleoprotein E yes no 0 0 0 4 0.816 1 1 1 59.9 59.928 2 0.00029959 17867 20230619_1885_Aki_TMTPro18x_K_F5 113.15 94.372 152370 121360 140670 144880 173960 200640 172090 167730 190910 186190 171170 157920 166120 141610 179190 173180 153560 134300 140780 111320 144410 145100 178110 197890 174180 174060 192720 186360 176290 161060 170300 148240 180530 171410 147040 128040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2398200000 9653 3714 9123 18428;18429;18430 14775;14776 14776 2 9606 Homo sapiens 0.016312556300590586 GDNQPLHIFDK Unmodified 1282.6306 0.63060004 1443 F5H7P7;B4DT22;A0A384MTS1;Q96BP3;D6R9Q1;B4DP34;Q96BP3-2 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes no 0 0 0 6 0 1 50.33 50.407 3 0.00024779 14068 20230619_1886_Aki_TMTPro18x_K_F6 107.14 71.403 108820 89124 101640 103270 113400 124760 113590 111130 124450 127360 132880 134670 132260 108380 124380 144380 131090 137650 100570 81719 104030 103430 116880 124240 114880 114900 126540 128050 135930 135510 134600 114570 127100 144080 125400 130790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72082000 9654 1443 9124 18431 14777 14777 1 9606 Homo sapiens 0.0005899655807297677 GDNRLDLLK Unmodified 1042.5771 0.57710791 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;Q7Z355;B4DVX2;Q7L4K8;Q9P1N9 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 1 6.5 0.5 1 1 46.497 46.583 3 0.00055424 11990 20230619_1887_Aki_TMTPro18x_K_F7 104.22 40.405 744040 665670 697530 700630 701680 743480 745960 730410 820710 747300 829790 765400 807430 641470 846330 879990 784670 728460 688030 609630 712450 705690 729590 748680 752070 747650 831990 754960 849730 772580 826210 678330 856710 871980 750980 693700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 769250000 9655 1736 9125 18432;18433 14778;14779 14779 2 9606 Homo sapiens 0.057522438462456194 GDPECHLFYNEQQEAR Unmodified 1991.8432 0.84318837 3471 P18065;C9JMY1 IGFBP2 Insulin-like growth factor-binding protein 2 yes no 0 0 0 1.5 0.5 1 1 42.885 42.966 3 1.1132E-14 11204 20230619_1881_Aki_TMTPro18x_K_F2 182.7 168 43732 35847 42718 43954 36334 44136 33788 36640 45023 57968 52729 56158 60136 39698 47013 69655 57165 57375 40430 32886 43382 43724 38236 44447 34608 38521 45621 57360 54066 56534 60445 43111 48724 68752 54599 54624 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72295000 9656 3471 9126 18434;18435 14780;14781 14781 2 9606 Homo sapiens -0.11305949954862626 GDPERPEAAGLDQDER Acetyl (Protein N-term) 1795.7973 0.79728403 4159 Q7LG56-5;Q7LG56 RRM2B Ribonucleoside-diphosphate reductase subunit M2 B yes no 1 0 1 1 0 1 37.128 37.128 2 7.5919E-09 8835 20230619_1880_Aki_TMTPro18x_K_F1 84.605 72.078 1714.2 0 1255.3 1310.3 2643.6 2249.7 1691.6 803.74 2613.7 2024.2 2358.6 1984.1 1442.6 921.54 1759.7 1964.6 2387.2 2334.8 1571.7 0 1333.5 1223.2 2608.4 2169.7 1786.1 956.07 2598.5 1982 2389 1980.4 1515.4 1043 1819.6 1976.9 2277.6 2213.9 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10658000 9657 4159 9127 18436 14782 14782 1 9606 Homo sapiens -0.06878271865480201 GDPIVQHR Unmodified 920.48281 0.48281359 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2YQI1;A0A7I2V4R2;B7ZA24;P40763-3;P40763-2;A0A7I2YQD2;A0A7I2V4R3;A0A7I2V395;A0A7I2V2G1;A0A7I2V552;A0A7I2V4F6;A0A7I2V2T1 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 0 0 3.5 0.5 1 1 29.052 29.138 3 0.00077293 5273 20230619_1882_Aki_TMTPro18x_K_F3 121.99 86.889 14152 12450 16539 13194 22873 23655 20370 14718 23657 18470 23067 21912 18457 20240 18566 14379 22608 21556 13111 11404 16677 13404 23173 22931 20769 15764 23869 18597 23485 22018 19022 20612 19076 14964 21585 20402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33741000 9658 1660 9128 18437;18438 14783 14783 1 9606 Homo sapiens 0.01939149814757002 GDPIVQHRPMLEER Unmodified 1675.8464 0.84642325 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2YQI1;A0A7I2V4R2;B7ZA24;P40763-3;P40763-2;A0A7I2YQD2;A0A7I2V4R3;A0A7I2V395;A0A7I2V2G1;A0A7I2V552;A0A7I2V4F6;A0A7I2V2T1 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 0 1 4 0 1 36.869 36.913 4 4.7546E-05 8319 20230619_1883_Aki_TMTPro18x_K_F4 92.063 73.23 38304 27884 31681 28060 40437 43826 37751 41497 43732 45239 48279 48140 49860 44888 39576 53978 59903 45462 35343 25548 32841 28557 41256 43080 38417 42618 44414 45606 49376 48646 50387 46862 41620 53584 57018 43323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33953000 9659 1660 9129 18439 14784 14784 1 9606 Homo sapiens 0.03553389680428154 GDPLLDQR Unmodified 912.46649 0.46649483 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 2.5 0.5 1 1 42.145 42.216 2 0.0019893 10814 20230619_1881_Aki_TMTPro18x_K_F2 133.86 101.39 228340 183240 225020 252910 288050 326710 287690 290500 358160 271120 320680 340860 319170 280400 300050 282230 349550 336510 211090 168330 230010 250530 294370 323830 292200 298750 359080 277350 330850 340740 325000 291320 308060 286720 333880 319090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 303940000 9660 3312 9130 18440;18441 14785 14785 1 9606 Homo sapiens 0.0067602385800000775 GDPNTEEIR Unmodified 1029.4727 0.47270242 3569 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 1 0 1 33.377 33.377 2 0.00070722 7326 20230619_1880_Aki_TMTPro18x_K_F1 126.24 100.84 43316 19553 54913 52695 45380 83665 52931 61117 79973 61718 75744 104490 96847 85881 53581 42792 103280 112020 40030 18207 54703 50815 48382 81565 53801 63990 79708 63700 78961 103300 96180 86991 57916 47615 98394 105630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67038000 9661 3569 9131 18442 14786 14786 1 9606 Homo sapiens -0.04085502701173027 GDQCCYSHSPPTPR Unmodified 1660.6722 0.67222363 454 A0A024R7I5;Q9NXH9-2;Q9NXH9;A8K8L2 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes no 0 0 0 4.5 0.5 1 1 31.145 31.216 3 7.006E-12 5991 20230619_1883_Aki_TMTPro18x_K_F4 148.62 143.91 14800 11881 15001 14482 11374 16009 17434 14585 15893 17720 19829 16289 20912 14962 16596 22854 21708 20570 13685 10900 15171 14434 12282 16032 17179 15090 16436 17695 20180 16582 21087 15906 17268 22690 20713 19566 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58060000 9662 454 9132 18443;18444 14787;14788 14787 2 9606 Homo sapiens -0.13168558807205955 GDQENVHPDVMLVQPR Oxidation (M) 1848.8788 0.87884559 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 1 0 3 0.816 1 1 1 41.81 41.871 3 1.0169E-05 10381 20230619_1882_Aki_TMTPro18x_K_F3 97.073 82.115 260860 203530 218940 243120 242220 264060 266250 272460 326740 295730 328440 309980 368820 315260 286080 369150 355780 381720 240820 186710 226390 242580 250560 265650 268940 278360 329440 298170 338440 314450 371260 327900 296670 370550 339910 362330 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 751490000 9663 3904 9133 18445;18446;18447 14789;14790;14791;14792 14791 2577 4 9606 Homo sapiens -0.011638677072369319 GDQENVHPDVMLVQPR Unmodified 1832.8839 0.88393097 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 0 0 3.5 0.5 1 1 44.859 44.917 3 2.8082E-15 11789 20230619_1882_Aki_TMTPro18x_K_F3 191.37 180.56 541610 430290 485810 478910 403700 504160 531660 522580 583200 710270 638840 733270 860240 670110 515820 914190 912520 986800 500290 394440 496950 480270 429860 508340 530400 537590 594310 708230 662760 741160 854570 706690 554670 917440 869770 936230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1351000000 9664 3904 9133 18448;18449 14793;14794;14795 14794 3 9606 Homo sapiens 0.0008043615537189908 GDREQLLQR Acetyl (Protein N-term) 1155.5996 0.59963426 145 A0A024R1K7;Q04917;B2R6N6;F8WEB6;A2IDB1 YWHAH 14-3-3 protein eta yes no 1 0 1 1 0 1 33.997 33.997 2 5.6909E-12 7540 20230619_1880_Aki_TMTPro18x_K_F1 117.93 37.557 4559.7 2779.7 3956.7 5685.2 3275.8 3494.5 5912.8 7273.7 4566.4 4236.9 5532.4 5594.9 4900.4 5090.6 4148.8 3638.8 6245.8 5706 4204.9 2570.4 4071.2 5470.8 3522.3 3780.5 5770.7 7086.8 4760.5 4479.4 5603.8 5600.9 4993.4 5189.1 4344.3 3798.4 5952 5399.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 932230000 9665 145 9134 18450 14796 14796 1 9606 Homo sapiens 0.028058432438683667 GDRSPEPGQTWTR Unmodified 1485.6961 0.69605384 3815 Q09666;B4DTV0;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q96EC4;Q9BVU3;Q09666-2 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 1 5 0 1 33.775 33.86 3 5.0573E-05 7113 20230619_1885_Aki_TMTPro18x_K_F5 96.673 85.302 15133 7623 9983.4 9474.6 12304 10753 11410 15054 17258 14837 18790 25927 20912 19843 17720 19109 26565 22548 13920 7010.9 10596 9442.2 12576 10881 11746 15066 17302 15339 19343 25586 21147 20615 18567 19407 25304 21395 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11318000 9666 3815 9135 18451 14797 14797 1 9606 Homo sapiens -0.027366339868649447 GDRYDALR Unmodified 964.47264 0.47264284 1889 A1LT96;A0AVT1;B3KSS1 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 1 4 0 1 32.165 32.226 3 0.0025238 6424 20230619_1883_Aki_TMTPro18x_K_F4 98.582 71.057 95746 74483 94653 96813 128020 121390 115190 111820 127380 120130 120680 115030 124370 107360 102390 136470 145920 120850 88498 68387 96735 96250 129840 120710 117250 115100 128850 120830 124230 116800 125830 112510 107080 135710 139020 115040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58577000 9667 1889 9136 18452 14798 14798 1 9606 Homo sapiens -0.011014579104880795 GDSEPLSEAAQAHTR Unmodified 1567.7227 0.72266253 1116 O75150;O75150-4;A0A0S2Z537;A8K6K1;H3BP71;A0A0S2Z4Z2;O75150-3;B3KQV1;H3BS50 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 0 0 0 2.5 0.5 1 1 35.361 35.418 3 1.8744000000000002E-25 7737 20230619_1882_Aki_TMTPro18x_K_F3 232.37 205.66 26703 23713 31094 30949 35179 41111 35865 47077 46309 36028 43263 45186 45968 32149 37811 33922 47557 43301 24738 21762 31287 30803 36257 40917 36471 47338 46427 37275 44651 45005 46401 33727 39104 34600 45378 41044 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 149260000 9668 1116 9137 18453;18454 14799;14800 14800 2 9606 Homo sapiens -0.03848989886205345 GDSHLNVQVSNFK Unmodified 1443.7106 0.71064128 567 A0A024R9D2;Q86UE4;E5RJU9 MTDH Protein LYRIC yes no 0 0 0 7.5 0.5 1 1 46.427 46.495 3 5.1396E-06 12076 20230619_1888_Aki_TMTPro18x_K_F8 125.53 94.299 176980 121350 160340 168380 167080 200410 183800 170840 272130 207470 209930 249290 256650 241720 182250 295320 307300 357890 163360 111560 164440 166550 173790 199470 186990 177610 269600 209220 220520 250930 257270 252410 194170 299010 293160 339080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 302060000 9669 567 9138 18455;18456 14801;14802 14802 2 9606 Homo sapiens 0.006534381612709694 GDSKKDDEENYLDLFSHK Unmodified 2138.9756 0.97564233 3807 Q07666;B4DDX2;B2R7B5;Q07666-2;B4E043;Q07666-3 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 0 0 2 4 0 1 53.027 53.047 4 0.00026733 15391 20230619_1883_Aki_TMTPro18x_K_F4 83.423 63.348 108950 90436 100050 100020 95266 110690 118590 101920 106030 131440 125280 97112 117370 87917 126440 116050 112850 94808 100680 82882 102320 100400 99965 110950 117830 105540 109600 130160 127150 99895 120350 92539 127600 115030 107980 90341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113160000 9670 3807 9139 18457 14803 14803 1 9606 Homo sapiens -0.04828646737087183 GDSLASWDGILDLPEQNTIHK Unmodified 2308.1335 0.13353995 4600 Q9NUY8-2;Q9NUY8;C9IZ32;C9JAM5 TBC1D23 TBC1 domain family member 23 yes no 0 0 0 5 0.816 1 1 1 62.647 62.681 3 0.0695 19159 20230619_1885_Aki_TMTPro18x_K_F5 37.4 14.38 24814 23630 31931 32158 23634 29077 33682 28177 30407 28385 30836 38181 40288 30685 29027 35922 33049 43029 23023 21691 31729 31733 25461 29605 33280 28890 31176 28973 32077 38046 40258 32197 29978 36389 31651 40757 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189740000 9671 4600 9140 18458;18459;18460 14804 14804 1 9606 Homo sapiens 0.031798525221802265 GDSLSLK Unmodified 718.38612 0.38611924 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 5.5 0.5 1 1 45.617 45.698 2 0.024608 12001 20230619_1886_Aki_TMTPro18x_K_F6 98.997 24.581 389560 282960 428830 451540 512090 563140 517360 486950 625030 483330 562720 633040 615800 567570 490290 497130 671710 734110 360270 260500 433790 443310 525450 558980 524530 502770 627740 493620 582950 633260 621330 584000 510800 513980 641360 694520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 535890000 9672 1718;4020 9141 18461;18462 14805 14805 1 9606 Homo sapiens 0.015661625349480346 GDSLSLKGETVNDCHAEIISR Unmodified 2300.1067 0.10667328 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 1 5 0 1 46.363 46.44 4 5.6328E-46 12238 20230619_1885_Aki_TMTPro18x_K_F5 266.14 251.37 72526 71277 94062 85701 86337 75147 89376 85492 63434 86498 92104 57073 58166 44351 102670 40318 40281 28021 67312 65337 93564 85279 90070 77101 89222 86666 67304 86377 91525 58876 62418 45988 99827 40119 39059 26790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66584000 9673 1718;4020 9142 18463 14806 14806 1 9606 Homo sapiens 0.008624206393051281 GDSRPAEAGEAAAGK Unmodified 1385.6535 0.65352033 1040 B7WPD9;A0A0G2JR66;Q2KJY2-2;Q2KJY2 KIF26B Kinesin-like protein;Kinesin-like protein KIF26B yes no 0 0 1 3 0 1 34.103 34.169 3 1.7659E-05 7250 20230619_1882_Aki_TMTPro18x_K_F3 110.84 95.744 25908 13987 21153 24325 29850 28508 27865 30033 35419 26087 38457 46431 33450 32688 31247 24843 42296 43589 23869 12911 22029 23755 30252 28538 28444 30472 35725 27199 39144 45701 34230 33749 32385 26165 40370 41197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13630000 9674 1040 9143 18464 14807 14807 1 9606 Homo sapiens -0.023880291150817357 GDSSHVVSEGVPR Unmodified 1324.6371 0.63714198 4598 Q9NUP1 BLOC1S4 Biogenesis of lysosome-related organelles complex 1 subunit 4 yes yes 0 0 0 3 0 1 33.203 33.274 3 0.0017862 6867 20230619_1882_Aki_TMTPro18x_K_F3 74.987 57.256 15824 10513 14776 19035 22019 21927 19372 21581 21442 17556 24052 20530 19788 18784 17057 18893 20310 22749 14607 9698.6 15230 18540 22211 21935 19754 21958 21810 18054 24339 20666 20214 19436 17584 19196 19418 21557 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12098000 9675 4598 9144 18465 14808 14808 1 9606 Homo sapiens -0.01219110281203939 GDSVIVVLR Unmodified 956.56548 0.56548059 3719 P62316;P62316-2;K7EJB5 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 0 0 0 6.5 0.5 1 1 51.058 51.135 2 0.0001184 14071 20230619_1887_Aki_TMTPro18x_K_F7 152.63 104.13 1139400 919040 1011200 1104700 1096200 1283900 1164700 1120900 1376500 1293900 1356800 1242900 1372600 1176100 1342800 1509200 1279400 1476300 1052500 843020 1039800 1102600 1134900 1280900 1176900 1161100 1389400 1297300 1393100 1262700 1398900 1233100 1363500 1508900 1226100 1401800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1732999999.9999998 9676 3719 9145 18466;18467 14809 14809 1 9606 Homo sapiens 0.08546046822903008 GDSVSDSGSDALR Unmodified 1264.5531 0.55313758 2235 B4DKX4;B2R6E2;Q53EL6-2;Q53EL6;Q5VZS7 PDCD4 Programmed cell death protein 4 yes no 0 0 0 1 0 1 36.334 36.334 2 1.6167E-35 8504 20230619_1880_Aki_TMTPro18x_K_F1 267.31 230.75 57019 33390 51884 60750 84277 115370 83104 75292 109780 69510 88176 105000 86756 92054 87964 66310 123130 127490 52591 30826 53721 59714 85177 111470 84599 79532 109320 71773 91546 104450 88824 94016 91238 70544 117500 120420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70105000 9677 2235 9146 18468 14810 14810 1 9606 Homo sapiens -0.06855686168751163 GDTACDLAR Unmodified 977.42364 0.42364373 3584 P42773;Q6ICV4 CDKN2C Cyclin-dependent kinase 4 inhibitor C yes no 0 0 0 2 0 1 34.485 34.542 2 5.854E-08 7496 20230619_1881_Aki_TMTPro18x_K_F2 209.84 172.68 50388 25375 56827 50446 62192 74347 54897 63947 73894 56190 75159 97718 82112 83266 57528 44038 126270 114210 46530 23479 57234 49163 64042 73058 56406 65816 74190 58505 77472 96678 82583 84319 62628 48860 120060 107780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48958000 9678 3584 9147 18469 14811 14811 1 9606 Homo sapiens -0.06597114261739989 GDTEPLVR Unmodified 885.4556 0.45559579 4594 Q9NU22 MDN1 Midasin yes yes 0 0 0 2 0 1 36.826 36.884 2 0.0092135 8442 20230619_1881_Aki_TMTPro18x_K_F2 95.909 54.257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9679 4594 9148 18470 14812 14812 1 9606 Homo sapiens 0.0082862148373124 GDTGGEDTAAPGR Unmodified 1202.5164 0.51635814 4523 Q9H773 DCTPP1 dCTP pyrophosphatase 1 yes yes 0 0 0 1 0 1 29.366 29.366 2 4.6934E-08 5742 20230619_1880_Aki_TMTPro18x_K_F1 166.69 142.47 13739 4822.4 15664 18912 17881 20345 15591 19110 16007 11929 22348 28939 20335 22465 21008 9575.3 26706 25822 12673 4543.3 15803 17924 18334 20401 15887 19421 16507 12958 22591 28348 20886 22692 21598 10782 25491 24357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13132000 9680 4523 9149 18471 14813 14813 1 9606 Homo sapiens -0.07679937994703323 GDTVLLK Unmodified 744.43815 0.43815481 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;A0A7P0TBK7;A0A7P0Z4D1;A0A7P0T946;A0A7P0T971;B4DYX2 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 0 6 0.816 1 1 1 48.284 48.364 3 0.010772 13139 20230619_1886_Aki_TMTPro18x_K_F6 86.086 10.776 70969 54034 63015 72988 85945 87786 88954 83159 100740 92308 108870 103130 111790 80449 87899 117950 115950 110110 65534 49636 65083 72321 87505 87545 89847 85529 102250 93137 111370 103510 112790 85763 91514 117390 110630 104680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 380120000 9681 3656 9150 18472;18473;18474 14814 14814 1 9606 Homo sapiens 0.05571325948710637 GDVDVSLPK Unmodified 928.48656 0.48656157 3815 Q09666;Q8N274;Q6ZQN2;Q13727 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 4.5 0.5 1 1 49.451 49.506 2 0.0029063 13776 20230619_1883_Aki_TMTPro18x_K_F4 112.84 50.322 95822 64653 70690 64020 74314 91724 97662 111930 162110 129810 144280 220400 201330 182130 131430 255820 272700 360110 88315 59248 73942 65163 77796 91108 99079 113360 160710 133040 151790 218290 200630 193090 143390 261240 260150 340610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147320000 9682 3815 9151 18475;18476 14815 14815 1 9606 Homo sapiens 0.019457747979686246 GDVEEDEAVPDSEQDIK Unmodified 1873.8065 0.80651131 445 B4DRY5;A0A024R7F7;O14787-2;Q4LE60;O14787;A0A075B780;Q05D48;B3KPC8 TNPO2;TNPO2 variant protein Transportin-2 yes no 0 0 0 1 0 1 48.247 48.247 3 2.808E-10 13638 20230619_1880_Aki_TMTPro18x_K_F1 144.18 123.35 22112 14227 13530 21839 17673 28626 19300 23627 35117 25699 29727 49887 40842 43392 21908 64377 69080 86035 20353 13098 14582 21489 18202 28279 19848 24537 34639 26625 31345 49331 40561 46063 25454 65409 65756 81425 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43789000 9683 445 9152 18477 14816 14816 1 9606 Homo sapiens -0.09543968090451926 GDVEEDEAVPDSEQDIKPR Unmodified 2126.9604 0.96038619 445 B4DRY5;A0A024R7F7;O14787-2;Q4LE60;O14787;A0A075B780;Q05D48;B3KPC8 TNPO2;TNPO2 variant protein Transportin-2 yes no 0 0 1 1 0 1 45.053 45.053 3 8.3169E-15 12322 20230619_1880_Aki_TMTPro18x_K_F1 162.82 153.64 100450 74155 81103 107210 93210 123240 103650 105240 125400 113360 127280 132080 122900 117110 132370 126950 129670 132180 92676 68181 84366 105680 96381 122900 104570 108990 126540 114740 130370 132730 126100 121750 134260 127740 124110 125480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162210000 9684 445 9153 18478 14817 14817 1 9606 Homo sapiens -0.05801558324947109 GDVEEDETIPDSEQDIRPR Unmodified 2198.9927 0.99274896 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;Q92973-3;A0A7P0T944;A0A7P0T9C0 TNPO1 Transportin-1 yes no 0 0 1 1 0 2 44.073 44.073 3;4 6.3928E-26 11950 20230619_1880_Aki_TMTPro18x_K_F1 217.91 202.99 128140 111500 140420 150370 128070 162820 140430 145180 173590 151660 165470 176440 183940 150900 143130 190840 199390 220200 118630 102370 141510 148780 134520 163220 141960 149740 174590 153730 170990 177170 185230 158680 149630 192610 190370 208760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 942880000 9685 629 9154 18479;18480 14818;14819 14819 2 9606 Homo sapiens -0.058787709219359385 GDVEHTIR Unmodified 925.46174 0.4617438 3057 Q9P2T1;Q6PKC0;Q9P2T1-3;H0YMB3;Q9P2T1-2;Q7Z527;H0YNJ6;H0YLV5;Q86SZ5;H0YMW6;H0YK71;H0YN22;H0YK13 GMPR2 GMP reductase 2;GMP reductase yes no 0 0 0 2 0 1 30.068 30.137 3 0.00034153 5753 20230619_1881_Aki_TMTPro18x_K_F2 133.86 103.61 24410 15691 25247 30277 31067 32389 30897 35177 40760 27314 35601 41159 42592 41280 29666 28777 51603 59835 22547 14492 25694 29378 31801 32631 31470 35531 40713 28474 37096 41136 42693 41939 31596 30858 49218 56472 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31946000 9686 3057 9155 18481 14820 14820 1 9606 Homo sapiens -0.0039686028476353385 GDVEMLCGGPPCQGFSGMNR Unmodified 2167.8907 0.89074896 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;A0A7I2V311;B3KVA0 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 6 0 1 55.189 55.265 3 1.0913000000000001E-29 16136 20230619_1886_Aki_TMTPro18x_K_F6 200.9 196.79 15463 16411 19042 19781 15476 17325 16709 18755 20545 24384 19984 17551 22937 15865 19216 21058 23253 19274 14352 15040 18994 19673 16388 17742 16911 19206 20722 24124 20639 18069 23118 16718 19836 20973 22182 18340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24753000 9687 442 9156 18482 14821 14821 1 9606 Homo sapiens -0.1464807834217936 GDVENIEVVQK Unmodified 1228.6299 0.62993134 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJA1;A0A804HKK7;A0A804HKX6 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 2.33 0.471 2 1 49.154 49.226 2;3 4.2058E-17 14094 20230619_1881_Aki_TMTPro18x_K_F2 215.72 143.49 512220 410600 465540 492730 615810 610720 571420 610860 666820 511730 570780 597230 592100 474870 573480 594250 647940 592970 473220 376640 479140 492490 626240 608770 581660 621200 669720 525240 591320 598420 602670 500250 587670 595150 618850 563420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1525999999.9999998 9688 1723 9157 18483;18484;18485 14822;14823 14822 2 9606 Homo sapiens 0.024761571183717024 GDVGSADIQDLEK Unmodified 1345.6361 0.63613893 4014 Q549N5;Q9Y5M8;H7C4H2 SRPRB Signal recognition particle receptor subunit beta yes no 0 0 0 2.5 0.5 1 1 51.358 51.416 3 3.3608E-11 15063 20230619_1881_Aki_TMTPro18x_K_F2 152.4 137.03 177070 130380 172260 178880 163120 192420 199890 195460 256740 206970 224660 219590 234410 188330 226980 286820 253930 248740 163590 119800 175320 176830 171330 193550 201140 199790 256870 209040 232420 221510 238560 200480 232760 284310 242660 236680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 497060000 9689 4014 9158 18486;18487 14824 14824 1 9606 Homo sapiens -0.022853694407558578 GDVGTWVR Unmodified 888.44537 0.44536545 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;A0A804HI02;A0A804HJU6;A0A0J9YVR1;A0A0J9YWI5 TBCD Tubulin-specific chaperone D yes no 0 0 0 6 0 1 44.499 44.588 2 0.018551 11496 20230619_1886_Aki_TMTPro18x_K_F6 90.308 66.54 246340 214240 254870 249990 256340 288990 278580 277320 336570 248250 284080 274880 256700 224480 303100 205310 319480 250850 227940 196410 258200 250120 266840 289010 281400 283350 337150 253410 292790 276060 265140 232240 307710 209530 305040 238030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79004000 9690 1722 9159 18488 14825 14825 1 9606 Homo sapiens -0.0033194145086099525 GDVHQALIVLQK Unmodified 1319.7561 0.75613491 3856 Q13535-2;Q13535-3;Q13535;A0A590UJ01 ATR Serine/threonine-protein kinase ATR yes no 0 0 0 1 0 1 52.076 52.076 3 0.001539 15233 20230619_1880_Aki_TMTPro18x_K_F1 82.543 59.115 22613 19169 22708 26788 23942 27522 28816 28880 32106 28138 24460 27839 31955 25340 27408 34019 32352 36132 20915 17608 23108 26427 24909 27795 28866 29392 32222 28473 25809 28192 32157 26695 28261 34141 30933 34282 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62583000 9691 3856 9160 18489 14826 14826 1 9606 Homo sapiens 0.1090470841431852 GDVTAEEAAGASPAK Unmodified 1372.647 0.64703797 3602 P49006 MARCKSL1 MARCKS-related protein yes yes 0 0 0 3 0.816 1 1 1 41.989 42.05 2 9.748800000000001E-33 10790 20230619_1881_Aki_TMTPro18x_K_F2 250.51 223.18 58098 37563 43897 54003 74879 80111 62995 58909 85974 60808 69099 72015 68695 66694 62906 64044 78356 77878 53543 34554 46299 53474 75066 78525 64863 61700 85545 61780 71684 72404 69928 68810 64925 65181 74818 73824 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172620000 9692 3602 9161 18490;18491;18492 14827 14827 1 9606 Homo sapiens -0.024379670664757214 GDVTITNDGATILK Unmodified 1416.746 0.74602373 3622 P50991;A8K3C3;B7Z9L0;B7Z2Z8 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 5 0.707 1 2 1 53.931 53.985 2;3 8.0494E-37 15442 20230619_1885_Aki_TMTPro18x_K_F5 304.38 186.57 378230 280440 324340 378630 333210 429240 366640 371220 493840 430750 397130 483590 506770 442150 381790 592360 555250 665160 349120 257640 334480 374800 347150 428650 371620 384880 492100 433990 417260 487100 508140 465470 401200 596180 530340 630600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1206200000 9693 3622 9162 18493;18494;18495;18496 14828;14829;14830 14829 3 9606 Homo sapiens 0.05432055898427279 GDVVNQDDLYQALASGK Unmodified 1791.8639 0.86390703 1451 A0A384N605;U3KQ56;Q9UBQ7;Q5M7Z5 GRHPR Glyoxylate reductase/hydroxypyruvate reductase yes no 0 0 0 4.5 0.5 1 1 61.435 61.461 3 1.7673E-09 18524 20230619_1885_Aki_TMTPro18x_K_F5 136.34 125.06 69816 61706 69139 75684 63002 71272 67101 70582 82116 76333 77081 85125 91846 75954 86454 92030 96536 104200 64584 56595 70231 75230 66074 72395 67918 72326 82618 77116 80034 85703 93014 79529 88594 92883 92320 98811 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233910000 9694 1451 9163 18497;18498 14831 14831 1 9606 Homo sapiens -0.00035036303552260506 GDWSQFTLWQQGR Unmodified 1607.7481 0.74808942 3822 Q12797;Q12797-10 ASPH Aspartyl/asparaginyl beta-hydroxylase yes no 0 0 0 3 0 1 62.242 62.272 2 0.0039931 19365 20230619_1882_Aki_TMTPro18x_K_F3 101.35 77.744 32367 28320 30043 32858 34912 38894 36924 40532 50135 33582 34146 34756 42010 29945 36731 36189 39188 41353 29924 25961 30805 32897 35962 38909 37513 41092 49648 34375 36132 35076 42344 31416 37575 36556 37486 39215 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31978000 9695 3822 9164 18499 14832 14832 1 9606 Homo sapiens -0.03147470573094324 GDYAPILQK Unmodified 1003.5338 0.53384611 2654 B4E357;Q5JPB8;Q53HL4;Q53GT4;G3V1D3;G3V180;Q9NY33-4;Q9NY33;E9PQ14 DKFZp686O1117;DPP3 Dipeptidyl peptidase 3 yes no 0 0 0 7 0 1 51.623 51.697 2 0.00030118 14341 20230619_1887_Aki_TMTPro18x_K_F7 123.92 70.746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9696 2654 9165 18500 14833 14833 1 9606 Homo sapiens 0.03222054068953639 GDYDAFFEAR Unmodified 1189.504 0.50400254 2824 D3DTE6;V9HW48;O75368;B0AZV6 SH3BGRL;HEL-S-115 SH3 domain-binding glutamic acid-rich-like protein yes no 0 0 0 3 0.816 1 1 1 55.421 55.445 2 2.768E-09 16516 20230619_1882_Aki_TMTPro18x_K_F3 195.57 177.84 245730 222560 227980 252760 320630 395190 332990 333240 367880 285190 317550 302890 347340 295600 352490 375280 362490 392350 227240 203960 234730 254610 326410 387260 335960 343290 370570 291570 329490 306770 353840 309410 359030 376710 346940 372370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 763910000 9697 2824 9166 18501;18502;18503 14834;14835 14835 2 9606 Homo sapiens -0.08316929667057593 GDYGPPGR Unmodified 817.37187 0.37186616 3000 F8WJN3;Q16630-3;Q16630;Q16630-2;B4DSU9 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes no 0 0 0 4 0 1 33.442 33.496 2 0.0050041 6912 20230619_1883_Aki_TMTPro18x_K_F4 114.78 86.676 84268 44295 100180 107310 128760 144540 114640 130100 119010 92950 145450 155180 127660 119420 124360 71303 166500 142090 77868 41118 100920 103540 131070 142840 116620 132880 121890 97833 147280 153390 130790 121830 128520 76585 158730 134300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70247000 9698 3000 9167 18504 14836 14836 1 9606 Homo sapiens -0.04412489893320526 GDYPLEAVR Unmodified 1018.5084 0.50835964 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 3.5 1.12 1 1 1 1 45.726 45.796 2 2.23E-05 12161 20230619_1882_Aki_TMTPro18x_K_F3 168.27 107.3 1948400 1488400 1647800 1889700 2020600 2423100 2189800 2027100 2426800 2700900 2790700 2877500 3028200 2548400 2521700 3408100 3113200 3103500 1798600 1366300 1706400 1881700 2076200 2400200 2205000 2116400 2475100 2699000 2856800 2902700 3059200 2684500 2610700 3391300 2972900 2951000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 10041000000 9699 370;3451 9168 18505;18506;18507;18508 14837;14838;14839 14838 3 9606 Homo sapiens -0.00015420453485148755 GDYPQAMK Oxidation (M) 924.40112 0.40111738 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 1 0 4.5 0.5 1 1 37.732 37.825 2 0.019087 8600 20230619_1885_Aki_TMTPro18x_K_F5 84.498 46.939 117770 84055 104400 104260 109270 117400 118690 111630 135000 130270 146740 135550 145160 127650 140380 123060 168030 128380 108710 77165 107230 103830 113390 117600 119640 114960 137050 130850 149870 137100 148020 131680 144240 124120 160230 122030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133820000 9700 2088 9169 18509;18510 14840;14841 14841 1316 2 9606 Homo sapiens -0.06410713659352041 GDYPQAMK Unmodified 908.4062 0.40620276 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 6 0 1 42.371 42.466 2 0.0042389 10538 20230619_1886_Aki_TMTPro18x_K_F6 117.04 84.815 233770 157200 220000 217340 201980 222860 232200 205860 277820 266360 308360 275600 298280 268450 264690 268330 364150 286330 215820 144520 224340 214600 212130 224530 233810 213210 281560 266340 314230 279180 303340 277110 275210 270700 346920 272050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 315270000 9701 2088 9169 18511 14842 14842 1 9606 Homo sapiens -0.0516640979674321 GDYYEAHQMYR Oxidation (M) 1447.5827 0.58266357 4155 Q7L5D6 GET4 Golgi to ER traffic protein 4 homolog yes yes 0 1 0 3.5 0.5 1 1 34.016 34.076 3 0.00012127 7185 20230619_1882_Aki_TMTPro18x_K_F3 114.86 102.95 38765 27624 36431 38937 46469 47259 39804 40699 51109 45707 52545 48175 48015 41735 50433 46662 53580 51529 35798 25394 37359 38485 47288 47007 40877 42161 51471 46018 53620 48588 49270 43528 51392 47100 51220 48898 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60890000 9702 4155 9170 18512;18513 14843;14844 14843 2680 2 9606 Homo sapiens -0.12322445424297257 GEAAAERPGEAAVASSPSK Unmodified 1783.8701 0.87005504 3524 P29966;Q6NVI1;Q05C82 MARCKS Myristoylated alanine-rich C-kinase substrate yes no 0 0 1 3.2 0.748 1 2 2 37.059 37.11 3;4 1.5661999999999998E-19 8337 20230619_1883_Aki_TMTPro18x_K_F4 149.85 139.39 475780 348320 390190 455940 558260 653590 523620 522870 683200 556540 672090 738290 595410 577570 535970 1100500 411010 849210 438990 319910 406490 453930 566430 642710 534720 544050 686000 566510 687040 736890 607640 627760 542610 1081600 397500 807640 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5338100000 9703 3524 9171 18514;18515;18516;18517;18518 14845;14846;14847 14846 3 9606 Homo sapiens 0.009474819279603253 GEADRDTYRR Unmodified 1237.58 0.57996145 3594;1322 A0A1W2PQS6;F6U211;A0A2R8Y7H1;A0A2R8YFH6;S4R435;Q14489;P46783;Q59GE4 RPS10;RPS10-NUDT3 40S ribosomal protein S10 no no 0 0 2 3 0 1 22.967 23.119 3 0.032478 3745 20230619_1882_Aki_TMTPro18x_K_F3 68.436 51.804 190730 89005 218390 214530 301700 263120 235770 262240 251770 212410 301360 290580 251350 218030 264730 103910 334560 268230 176110 82673 220670 206770 304380 262280 242200 266560 257370 219690 304640 288720 258800 221470 271860 116020 318970 253270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308310000 9704 1322;3594 9172 18519 14848 14848 1 9606 Homo sapiens -0.0293253276690848 GEAEALSR Unmodified 831.40865 0.4086456 4418 Q9BRP8-2;Q9BRP8 WIBG Partner of Y14 and mago yes no 0 0 0 1.5 0.5 1 1 33.299 33.328 2 0.0059672 6999 20230619_1881_Aki_TMTPro18x_K_F2 111.95 73.155 72770 36057 89656 90764 120230 117180 93937 114390 101870 70628 115740 145760 100470 101560 123410 47821 140420 132780 67252 33508 90109 87412 121590 116330 96575 115850 103740 76005 117690 142870 104230 103370 125590 53936 134130 125250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61151000 9705 4418 9173 18520;18521 14849;14850 14850 2 9606 Homo sapiens -0.013802380674178494 GEAGGQAEAEGDAPGPR Unmodified 1567.6863 0.68627702 1562 A0A4W8W4R1;Q99674 CGREF1 Cell growth regulator with EF hand domain protein 1 yes no 0 0 0 1 0 1 33.223 33.223 3 1.2624E-09 7258 20230619_1880_Aki_TMTPro18x_K_F1 139 128.1 6996.9 3168.2 7782.6 6489 5449.2 6013.6 5996.2 7389 8403.9 7827.8 9475.4 10181 9529 8289.8 8061.3 6663.6 11226 10366 6457.8 2934.8 7795.8 6273.9 5861.9 6142.9 6098.9 7462.8 8463.7 7957.4 9675.7 10156 9657.2 8531.2 8388.8 6935.3 10705 9809.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30516000 9706 1562 9175 18522 14851 14851 1 9606 Homo sapiens -0.07485866782917583 GEAGQNLLEMMACDR Unmodified 1693.7222 0.72221029 3613 P49792;A0A8V8TLA0;A0A8V8TL79;A6NKT7;J3KNE0;Q7Z3J3;B4DYH0;F8VYC4;A0A286YES2;P0DJD1;P0DJD0;D3DX73;B4DZH4 RANBP2;RGPD3;RGPD4;RGPD1;RGPD2;hCG_1994636 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 1 yes no 0 0 0 4.5 0.5 1 1 61.236 61.263 3 0.014836 18863 20230619_1883_Aki_TMTPro18x_K_F4 60.489 54.517 29331 26902 27255 30000 30474 27906 29688 30505 39058 27587 29846 29735 40534 28613 38151 38822 35961 36951 27126 24649 27915 30027 31353 28462 30268 30913 38870 28125 31529 30082 40878 30117 38718 38741 34435 35113 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51200000 9707 3613 9176 18523;18524 14852 14852 1 9606 Homo sapiens -0.09690192193579605 GEALSALDSK Unmodified 989.50294 0.50293991 3304 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 0 0 4.33 0.471 2 1 49.572 49.621 2;3 5.0612E-06 13823 20230619_1883_Aki_TMTPro18x_K_F4 192.26 112.1 403200 341890 377540 403920 413920 487030 449900 429630 568120 530250 533920 552270 589570 460700 494240 650270 652600 603640 372720 313500 386420 403910 428500 484850 455100 445580 570740 531310 551870 556680 595360 488370 513830 647310 622530 574020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 407640000 9708 3304 9177 18525;18526;18527 14853;14854;14855 14853 3 9606 Homo sapiens 0.007768559640453532 GEAPGAETPSLR Unmodified 1183.5833 0.5833155 907 C9JE12;C9JCW7;A0A090N8Q3;A0A590UJA9;Q9BVT8 TMUB1;C7orf21 Transmembrane and ubiquitin-like domain-containing protein 1 yes no 0 0 0 2.5 0.5 1 1 38.471 38.529 2 0.000411 8992 20230619_1882_Aki_TMTPro18x_K_F3 128.01 83.054 34575 29343 32041 36162 36357 40237 38363 38705 47435 41820 44902 48137 56576 43250 47289 55741 58564 53932 31959 26917 32850 36011 37495 40344 38843 39732 47707 42305 46717 48431 56910 45451 48915 55687 55893 51261 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46580000 9709 907 9178 18528;18529 14856 14856 1 9606 Homo sapiens -0.0011328271289130498 GEAQAAGPSGVSVSR Unmodified 1371.6743 0.67425577 3333 O94819 KBTBD11 Kelch repeat and BTB domain-containing protein 11 yes yes 0 0 0 4 0 1 35.627 35.675 2 3.0199E-13 7797 20230619_1883_Aki_TMTPro18x_K_F4 159.5 110.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9710 3333 9179 18530 14857 14857 1 9606 Homo sapiens 0.0032856126456408674 GEATVSFDDPPSAK Unmodified 1419.6518 0.65178899 2041;4307 Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637-2;P35637;Q70T18;Q92804-2;Q92804;B4E312;A0A0J9YYE0 FUS;TAF15 RNA-binding protein FUS;TATA-binding protein-associated factor 2N no no 0 0 0 3.5 0.957 1 2 2 1 48.382 48.444 2;3 1.2923E-08 13247 20230619_1883_Aki_TMTPro18x_K_F4 164.33 147.76 751030 487440 659440 703880 974500 1130700 981830 981960 1196300 759180 829210 790310 987690 849480 820150 919400 1046900 1046100 692860 448420 682750 698270 988400 1107000 995470 1007000 1190800 781310 874650 803630 995540 878250 849940 929580 999430 992210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3685699999.9999995 9711 2041;4307 9180 18531;18532;18533;18534;18535;18536 14858;14859;14860 14859 3 9606 Homo sapiens -0.041250829237242215 GEAVQEELLK Unmodified 1114.587 0.58700389 3873 Q14008-2;Q14008;Q14008-3;Q8NAH3;E9PQH5 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 2.5 0.5 1 1 50.823 50.885 2 0.0054315 14850 20230619_1881_Aki_TMTPro18x_K_F2 100.88 62.792 78616 68090 77911 85659 78865 89796 90302 86023 101690 103900 101700 95191 102940 83513 95359 113680 100470 109120 72715 62470 79273 85110 82175 90399 90738 88632 102990 103780 104360 96674 104630 88152 97490 113430 96139 103660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107140000 9712 3873 9181 18537;18538 14861 14861 1 9606 Homo sapiens 0.034293870609417354 GECQACDQLHFCR Unmodified 1679.6603 0.66027874 4358 Q96H79 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 0 0 0 3.5 0.5 1 1 39.083 39.131 3 1.1022E-16 9172 20230619_1883_Aki_TMTPro18x_K_F4 217.2 211.16 94598 76400 86325 85772 93409 94985 95515 94336 113740 113000 115980 120750 121960 106880 107080 133340 133370 122820 87402 70035 88470 86013 96499 95385 96760 96916 114960 113450 119170 121770 123620 112070 110740 132910 127280 116800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 188760000 9713 4358 9182 18539;18540 14862;14863 14863 2 9606 Homo sapiens -0.15236498822036992 GEDEAAMVESVGLALVK Unmodified 1716.8604 0.86040156 1643 A0A7I2SU25;Q6QNY7;Q6QNY6;Q6QNY5;Q9Y223-5;Q9Y223-3;Q9Y223;Q9Y223-2;Q9Y223-4 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes no 0 0 0 4 0 1 64.381 64.389 3 0.01916 20204 20230619_1883_Aki_TMTPro18x_K_F4 52.522 35.241 7492.9 6118 8934.1 8859.4 7715.8 7768.7 8865.3 6508 9169 7279.3 10241 10325 10790 9770.1 12844 11298 13185 13502 6939.4 5623 8935.9 8704.9 8130.2 7910.7 8881 6770.8 9355.5 7415.3 10488 10332 11097 10176 13034 11456 12614 12799 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19378000 9714 1643 9183 18541 14864 14864 1 9606 Homo sapiens 0.030645775981838597 GEDEEENNLEVR Unmodified 1431.6114 0.61138074 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;F8WF32 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 1 0 1 38.299 38.299 2 5.3144000000000004E-24 9292 20230619_1880_Aki_TMTPro18x_K_F1 260.08 241.01 101870 67106 86569 98562 114580 130420 106610 110630 174600 119840 135180 159920 162700 137280 130780 164460 168190 182660 93967 61742 89710 97304 116790 128960 110000 114620 172300 121990 141870 159740 163710 143790 135800 165740 160660 173250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 497520000 9715 3384 9184 18542 14865;14866 14865 2 9606 Homo sapiens -0.08716049314148222 GEDFPANNIVK Unmodified 1202.5932 0.5931519 1503 C9J3L8;C9J5W0;B2R6N9;A0A3B3IRT8;E9PAL7;C9IZQ1;P43307 SSR1 Translocon-associated protein subunit alpha yes no 0 0 0 4.5 0.5 1 1 50.293 50.347 3 6.6856E-05 14125 20230619_1883_Aki_TMTPro18x_K_F4 107.06 56.848 138080 113970 142040 157080 156180 179600 171100 175770 203240 173240 180420 177970 188210 156710 181230 195780 194220 207910 127720 104680 144290 155340 161580 179750 172640 179740 204250 175410 186530 179810 191510 164460 185210 196750 185800 197290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 273150000 9716 1503 9185 18543;18544 14867;14868 14867 2 9606 Homo sapiens -4.094707560398092E-05 GEDHPAVMR Unmodified 1010.4604 0.46036359 2232 B2R6A9;Q9BW71-2;Q9BW71 HIRIP3 HIRA-interacting protein 3 yes no 0 0 0 2 0 1 28.43 28.505 3 0.00057201 5180 20230619_1881_Aki_TMTPro18x_K_F2 108.81 90.027 12652 10018 11426 11232 11700 15084 12526 12920 17007 14242 16211 15975 16423 15042 17293 11723 17813 13017 11688 9184.2 11714 11297 12182 14907 12721 13381 17030 14386 16680 16098 16803 15367 17564 11930 17005 12367 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4289800 9717 2232 9186 18545 14869 14869 1 9606 Homo sapiens -0.04444817645173771 GEDKDEGPVAEQVK Unmodified 1499.7104 0.71036651 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;A0A024QZ91;A0A024QZC0 ATXN2L Ataxin-2-like protein yes no 0 0 1 2.25 0.829 1 1 2 41.225 41.271 3 5.5714E-07 10419 20230619_1881_Aki_TMTPro18x_K_F2 137.46 109.16 33985 32433 30704 36585 30962 47573 35862 34700 57152 50969 50694 78843 63540 52097 42616 68147 85586 86827 31433 29715 31521 36738 32428 46952 36519 36791 56760 51503 53035 77767 63493 55484 46211 69178 81481 82266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106170000 9718 4285 9187 18546;18547;18548;18549 14870;14871 14870 2 9606 Homo sapiens -0.019500263492545855 GEDLANINR Unmodified 1000.4938 0.49377221 2784 CON__P28800 yes yes 0 0 0 2 0 1 39.559 39.629 2 0.004852 9626 20230619_1881_Aki_TMTPro18x_K_F2 88.921 58.184 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9719 2784 9188 18550 14872 14872 1 -0.006454926016203899 GEDLTEEEDGGIIR Unmodified 1531.7002 0.70019575 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 1 0 1 48.219 48.219 2 1.6878E-57 13642 20230619_1880_Aki_TMTPro18x_K_F1 333.8 274.88 46987 31579 37050 51250 30643 44955 45834 39061 58317 63842 59394 77343 79060 71897 61403 87649 84140 117490 43323 29089 38471 50003 32875 45754 45699 41026 58792 63617 61857 77676 79285 75203 64159 89394 80516 111160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76120000 9720 3789 9189 18551 14873 14873 1 9606 Homo sapiens -0.044386340744722474 GEDSVPDTVHHVVVPVNPK Unmodified 2024.0327 0.032703697 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 4.5 0.5 1 1 45.296 45.356 4 1.5963E-07 11775 20230619_1885_Aki_TMTPro18x_K_F5 115.8 107.51 419330 317830 370830 423380 364890 487570 394910 386010 559010 529960 501380 676490 663750 577560 478980 831870 765110 1055800 387190 291920 381040 419520 381400 485590 401490 405370 558140 532570 525200 676620 664000 612740 508150 843040 731300 999340 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 533520000 9721 1661 9190 18552;18553 14874;14875;14876 14875 3 9606 Homo sapiens 0.06164865329901659 GEDVPLTEQTVSQVLQSAK Unmodified 2028.0375 0.037514303 650 Q53FU3;A0A024RB72;F8VVA7;P61923;P61923-4;F8W651;P61923-3;F8VYK5;P61923-2 COPZ1 Coatomer subunit zeta-1 yes no 0 0 0 5.5 0.5 1 1 62.654 62.704 3 0.0041442 19184 20230619_1885_Aki_TMTPro18x_K_F5 44.468 39.566 34706 32026 36741 36431 38469 40881 45645 40783 50189 43425 39527 46603 51981 46789 46366 52976 49101 54811 32133 29348 37183 36503 39992 41012 45727 41754 50452 43864 41659 47162 52416 48577 47435 53222 46992 52019 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147370000 9722 650 9191 18554;18555 14877 14877 1 9606 Homo sapiens 0.06461704682055824 GEEAAGYAQESQREEAS Unmodified 1810.7606 0.76056417 213 A0A024R2U2;B4DM24;E7ETR1;B4DIG8;B4DMF2;A0A024R331;B2RDF9;A0A140VKD5;Q8NCB2-3;Q8NCB2-2;Q8NCB2 CAMKV CaM kinase-like vesicle-associated protein yes no 0 0 1 1 0 1 36.765 36.765 3 2.5543E-13 8700 20230619_1880_Aki_TMTPro18x_K_F1 152.68 149.44 11202 6854.6 9011.7 9424.3 9536.4 9527.7 9690.9 8615.6 12644 12972 12001 13829 14938 15579 11510 18558 17622 17393 10325 6304.2 9344.5 9306 9871.1 9608.4 9851.8 8986.1 12698 12910 12481 14062 15018 16155 12141 18515 16800 16533 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34451000 9723 213 9192 18556 14878 14878 1 9606 Homo sapiens -0.11238568482008304 GEEDWLYER Unmodified 1195.5146 0.51456723 3146 J3QQZ9;V9HW45;Q53FP0;Q9NVS9-3;Q9NVS9;Q9NVS9-4 PNPO;HEL-S-302 Pyridoxine-5'-phosphate oxidase yes no 0 0 0 1.5 0.5 1 1 50.825 50.851 2 7.6768E-05 14687 20230619_1880_Aki_TMTPro18x_K_F1 174.02 129.63 105950 91940 100060 114450 86433 114260 131110 123290 141160 142080 138030 157520 154250 138440 154670 152610 148030 178420 97961 84342 102060 113730 92199 115710 129890 125870 143130 143040 142650 158480 156970 144190 156900 154590 141900 169080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 224980000 9724 3146 9193 18557;18558 14879 14879 1 9606 Homo sapiens -0.07536947012613382 GEEGHDPKEPEQLR Unmodified 1619.754 0.75396265 1469 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;B4E036 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 0 0 1 1.5 0.5 1 1 33.626 33.655 3;4 1.4349E-09 7455 20230619_1880_Aki_TMTPro18x_K_F1 169.09 146.44 58819 38712 51401 70460 63918 92638 77035 68477 81958 77179 98794 102060 87480 78549 102050 79139 88289 90678 54265 35719 53180 68728 65939 91322 77030 71896 83822 78312 100140 101650 90329 81807 102630 80252 84624 85995 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148410000 9725 1469 9194 18559;18560 14880;14881 14880 2 9606 Homo sapiens -0.031124168520818785 GEEGHDPKEPEQLRK Unmodified 1747.8489 0.84892567 1469 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;B4E036 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 0 0 2 3.25 0.829 1 1 2 35.111 35.164 4;5 1.5006E-07 7732 20230619_1881_Aki_TMTPro18x_K_F2 134.25 116.09 58922 41497 58451 62073 70152 69140 70097 64006 72906 72787 91890 85364 68717 65111 82174 66660 78868 69331 54433 38177 59607 61063 71864 69262 70771 66004 74833 73464 92351 85396 71534 67873 83053 67179 75426 65858 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 499920000 9726 1469 9195 18561;18562;18563;18564 14882;14883 14882 2 9606 Homo sapiens 0.00491516619081267 GEEHCGHLIEAHK Unmodified 1515.6889 0.68885998 3092 H7C4E5;Q14061;C9J8T6 COX17 Cytochrome c oxidase copper chaperone yes no 0 0 0 3 0.816 1 1 1 31.205 31.276 5 2.5269E-15 6072 20230619_1882_Aki_TMTPro18x_K_F3 196.11 168.46 223220 187920 207060 188500 185980 170850 199570 209620 232770 245080 271360 256090 323290 250650 228490 367960 349200 284130 206320 172070 211190 190330 195010 175220 201610 212400 236890 246090 278650 259650 323760 264900 241410 362760 332500 270990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1038499999.9999999 9727 3092 9196 18565;18566;18567 14884;14885 14885 2 9606 Homo sapiens -0.04835689858941805 GEEILSGAQR Unmodified 1058.5356 0.53563702 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 3 0 1 40.49 40.546 2 2.4998E-09 9826 20230619_1882_Aki_TMTPro18x_K_F3 197.81 113.06 348210 268530 295820 328970 361960 384850 383120 392010 451840 397590 466140 491860 497490 413860 417580 525880 547230 496720 321470 246410 306070 328010 371390 385120 387160 400090 456800 404450 479060 492580 503020 435310 433760 524730 521990 472280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 446590000 9728 1207 9197 18568 14886 14886 1 9606 Homo sapiens 0.008710630869245506 GEEIYSMDEGIR Oxidation (M) 1413.6082 0.60820962 4386 Q96P70 IPO9 Importin-9 yes yes 0 1 0 1 0 1 43.667 43.667 2 1.6656E-05 11717 20230619_1880_Aki_TMTPro18x_K_F1 139.54 130.96 61072 37873 40566 60340 44663 62581 42172 49601 73868 77614 93015 126360 111530 98137 49823 130300 123330 138070 56229 34891 43098 59045 46233 62757 43676 52343 74241 78425 95453 125060 110400 103810 56256 130600 117390 131010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76282000 9729 4386 9198 18569 14887 14887 2756 1 9606 Homo sapiens -0.08205015692487905 GEEIYSMDEGIR Unmodified 1397.6133 0.613295 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 1.5 0.5 1 1 50.009 50.038 2 2.0779999999999998E-32 14356 20230619_1880_Aki_TMTPro18x_K_F1 290.68 272.41 135570 81880 94478 138700 81028 135210 93615 110530 160630 175460 179520 249410 228770 217130 113970 260350 255610 298870 124840 75505 99489 135180 86189 136230 95800 116400 160710 176120 185720 248580 226770 227220 126550 262610 243500 283300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129110000 9730 4386 9198 18570;18571 14888;14889 14888 2 9606 Homo sapiens -0.06960711829879074 GEENLAGWRPR Unmodified 1283.6371 0.6370824 1516 Q12756-3;A0A3B3ITW6;A0A3B3ITF7;Q12756;Q12756-2;A0A3B3ITE5;A0A3B3IUA1;A0A3B3IT28;A0A3F2YNW9;A0A3B3IU40;X5D7J0;A0A087WWA3;A0A8Q3WLB3;Q4R9M9;Q4R9M8;A0A8Q3WM94;A0A8Q3WLB2;A0A3B3ITK3;A0A024R4H4;O60333-2;O60333;O60333-4;Q4R9M7;A0A0U1RQL3;H7C3Y8;B4DMM0;B4DMF3 KIF1A;KIF1B;KIF1Bbeta Kinesin-like protein KIF1A;Kinesin-like protein;Kinesin-like protein KIF1B yes no 0 0 1 6 0 1 41.394 41.488 3 1.464E-07 10157 20230619_1886_Aki_TMTPro18x_K_F6 134.3 83.698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9731 1516 9199 18572 14890 14890 1 9606 Homo sapiens 0.006609345094375385 GEENLMDAQVK Oxidation (M) 1248.5656 0.56561652 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 1 0 2 0.816 1 1 1 42.492 42.54 3 0.00011711 10719 20230619_1882_Aki_TMTPro18x_K_F3 115.33 79.023 248870 177980 208950 246670 291700 283630 257630 277590 336130 290930 351380 342750 344150 300800 271760 324040 363260 364310 229640 163590 217000 243860 295470 283900 264180 284310 338440 294970 359290 344250 348150 312890 282960 327370 346690 345590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 431420000 9732 3621 9200 18573;18574;18575 14891;14892;14893 14893 2300 3 9606 Homo sapiens -0.04872366030099329 GEENLMDAQVK Unmodified 1232.5707 0.5707019 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 2.5 0.957 1 2 2 1 48.36 48.417 2;3 9.9163E-06 13728 20230619_1881_Aki_TMTPro18x_K_F2 147.62 86.225 651590 471370 576420 628780 652900 697130 613530 605410 838670 811720 991490 896700 994310 867550 680970 1193300 1164200 1108400 601490 433040 593160 622770 671490 697700 628020 630450 847540 812250 1008900 906630 1000400 912810 727480 1187500 1108900 1053800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2471400000 9733 3621 9200 18576;18577;18578;18579;18580;18581 14894;14895 14894 2 9606 Homo sapiens -0.036280621674677604 GEFDPGQDTYQHPPK Unmodified 1714.7587 0.75871368 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;A0A7I2V614;B4DEC3;Q71UF1;B4DW08 ACO2 Aconitate hydratase, mitochondrial yes no 0 0 0 4 0 1 43.444 43.488 3 0.001043 10992 20230619_1883_Aki_TMTPro18x_K_F4 72.898 61.458 44816 36933 46224 50258 51954 64695 55945 63994 75791 67671 73651 97988 90297 78216 62458 90867 101150 126730 41453 33919 46964 49838 53705 64272 56802 65496 75995 69121 76521 97368 90360 82035 66300 93011 96586 119890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35998000 9734 1050 9201 18582 14896;14897 14896 2 9606 Homo sapiens -0.0700753270932637 GEFDSSEFEVR Unmodified 1300.5572 0.55716033 4689 Q9UNH6-2;Q9UNH6;Q9UNH6-3;B7ZC83;B4DP69;E9PNL2 SNX7 Sorting nexin-7 yes no 0 0 0 1 0 1 50.857 50.857 2 3.8555E-17 14721 20230619_1880_Aki_TMTPro18x_K_F1 273.79 244.83 63594 58216 61512 79036 59977 67757 64956 63025 66457 70443 74216 64751 84017 66961 68028 84713 72559 80504 58831 53444 62739 77916 62561 69256 65277 64957 67962 70627 76137 66138 84639 69964 69803 84557 69435 76479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113630000 9735 4689 9202 18583 14898 14898 1 9606 Homo sapiens -0.08109596675058128 GEFETGFEK Unmodified 1042.4607 0.46074075 3455;2572 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6;B4DQM6;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B no no 0 0 0 3 0 1 50.469 50.544 2 0.0041998 14361 20230619_1882_Aki_TMTPro18x_K_F3 91.867 30.188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9736 3455;2572 9203 18584 14899 14899 1 9606 Homo sapiens -0.05879119444330172 GEFGDVMLGDYR Unmodified 1357.5973 0.597251 2025 B5BU52;B2R6Q4;A8K3B6;P41240;B4DMZ0;B4DP99;Q53EL3 CSK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase CSK yes no 0 0 0 3.5 0.5 1 1 58.263 58.28 2 2.776E-09 17715 20230619_1882_Aki_TMTPro18x_K_F3 178.46 150.84 43422 35296 40955 35539 33710 40723 42128 41870 50460 54816 48656 52612 59611 44292 51373 58101 58932 58573 40131 32324 41671 35980 35858 40825 42259 43030 50907 54627 50511 53209 60064 46729 52837 58169 56310 55629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52055000 9737 2025 9204 18585;18586 14900 14900 1 9606 Homo sapiens -0.0672437327609714 GEFGGFGSVSGK Unmodified 1127.5247 0.52473799 3814 Q09028-3;Q09028-2;Q09028;Q09028-4;C9JPP3 RBBP4 Histone-binding protein RBBP4 yes no 0 0 0 7.2 0.748 1 2 2 52.262 52.338 2;3 1.3491E-13 14610 20230619_1887_Aki_TMTPro18x_K_F7 255.19 199.82 494290 392000 417510 456610 401500 510210 477330 479520 563880 582880 558320 560260 682060 536440 457530 722500 593520 586600 456390 359490 430590 456580 421180 511070 479610 494710 569650 582910 578250 569250 681320 563990 478180 714680 566510 558620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2193300000 9738 3814 9205 18587;18588;18589;18590;18591 14901;14902 14901 2 9606 Homo sapiens -0.03392339287370305 GEFGVYLVSDGSSR Unmodified 1471.6943 0.69432251 1669 O75306;A0A7I2V4X8;B7Z792;O75306-2;A0A7I2YQG7;A0A7I2V596;Q53HG2;A0A7I2V4G5;A0A7I2YQD8;Q9HC11 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 5 0 1 56.142 56.203 2 3.7229E-11 16339 20230619_1885_Aki_TMTPro18x_K_F5 176.18 149.8 62274 45302 48375 61433 55788 68602 67326 62685 70846 76807 67409 72697 79689 70252 62067 84261 76922 86745 57437 41625 50505 60776 57754 68662 67296 64835 71904 76745 69887 73887 80136 73291 64370 84520 73523 82328 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85349000 9739 1669 9206 18592 14903 14903 1 9606 Homo sapiens -0.02265687795465965 GEFGVYLVSDGSSRPYR Unmodified 1887.9115 0.91152593 1669 O75306;A0A7I2V4X8;B7Z792;O75306-2;A0A7I2YQG7;A0A7I2V596;Q53HG2;A0A7I2V4G5;A0A7I2YQD8;Q9HC11 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 1 1 0 1 52.076 52.076 3 4.321E-39 15209 20230619_1880_Aki_TMTPro18x_K_F1 265.43 244.37 58927 55570 57222 64649 71122 71722 73687 70174 65287 66262 64566 60949 70442 55867 67452 69162 64155 71383 54527 50929 58523 64641 72755 71980 73882 71700 66999 67004 66534 61970 71529 58532 68472 69407 61465 67750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135280000 9740 1669 9207 18593 14904 14904 1 9606 Homo sapiens 0.0030866268728004798 GEFTIETEGK Unmodified 1109.5241 0.52406928 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4;A0A6Q8PHI7;H7C443 GARS Glycine--tRNA ligase yes no 0 0 0 2 0 1 49.388 49.447 3 0.00011056 14185 20230619_1881_Aki_TMTPro18x_K_F2 119.68 84.96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9741 3576 9208 18594 14905 14905 1 9606 Homo sapiens -0.02631178727074257 GEFTYYEIQDNTGK Unmodified 1663.7366 0.73658126 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8 IFI16 Gamma-interferon-inducible protein 16 yes no 0 0 0 4 0.707 1 2 1 55.071 55.104 2;3 9.3368E-12 15887 20230619_1885_Aki_TMTPro18x_K_F5 178.22 163.94 76619 66609 75796 85605 147100 177010 158250 158460 164790 141190 129900 130140 166190 122150 136210 179140 147090 153240 70869 61124 78280 86048 147520 171530 158960 162540 166140 143330 136520 132460 166930 129340 139880 177510 140670 145800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 629560000 9742 2829 9209 18595;18596;18597;18598 14906;14907;14908 14908 3 9606 Homo sapiens -0.06873757177777406 GEFVTTVQQR Unmodified 1163.5935 0.59348625 3570 V9HWF2;P40925;P40925-3;A0A5K1VW95;P40925-2;B9A041;B8ZZ51 HEL-S-32;MDH1 Malate dehydrogenase;Malate dehydrogenase, cytoplasmic yes no 0 0 0 6 0.816 2 2 2 42.057 42.141 2;3 2.7529E-09 10143 20230619_1887_Aki_TMTPro18x_K_F7 195.7 127.71 306040 258200 267010 306460 309920 394010 344770 329860 393680 338130 360110 365260 382580 331990 323400 410910 560150 395650 282740 236780 275470 306610 320000 390180 347010 341660 396810 342300 372040 368590 387320 347660 343350 410550 532520 376560 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2878400000 9743 3570 9210 18599;18600;18601;18602;18603;18604 14909;14910;14911 14911 3 9606 Homo sapiens 0.018233250123103062 GEFYNEASNLQVAIR Unmodified 1709.8373 0.83729835 2460 Q96ID4;B4DE93;G3V0I5;E5KNH5;P49821-2;P49821;Q53G70;E9PJL9;E9PLC6;E9PQP1;E9PMX3;E9PPR0 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 6 0 2 57.184 57.256 3 4.0056999999999997E-28 16965 20230619_1886_Aki_TMTPro18x_K_F6 217.19 198.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9744 2460 9211 18605;18606 14912;14913 14912 2 9606 Homo sapiens 0.010773195957654025 GEGDLSQLSK Unmodified 1032.5088 0.50875357 4636 Q9P013;A0A024R3B4;A0A024R3C8 CWC15;HSPC148 Spliceosome-associated protein CWC15 homolog yes no 0 0 0 4 0 1 46.298 46.341 2 0.00041735 12324 20230619_1883_Aki_TMTPro18x_K_F4 126.71 97.234 84365 58041 69843 89854 85821 102860 85480 91741 122770 111510 123150 148810 146320 125140 96058 162150 170260 160500 77821 53425 72527 88218 88042 102700 87359 95022 122970 112810 127440 148560 146300 131780 103020 162050 162120 152500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57739000 9745 4636 9212 18607 14914 14914 1 9606 Homo sapiens -0.006200455242833414 GEGEGQIWGLVEK Unmodified 1400.6936 0.69359423 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 4.5 0.5 1 1 60.274 60.301 3 0.021678 18498 20230619_1883_Aki_TMTPro18x_K_F4 57.328 36.865 41572 31847 42333 38941 41622 48465 47568 55547 56287 54690 46291 45699 55200 46403 47409 59027 53986 55926 38431 29224 42915 38893 43475 48436 47906 56182 56482 55039 48351 46842 55693 48521 48773 58905 51604 53144 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 307800000 9746 2830 9213 18608;18609 14915 14915 1 9606 Homo sapiens 0.00927517555464874 GEGESPPVNGTDEAAGATGDAIEPAPPSQGAEAK Unmodified 3176.4382 0.43817399 3602 P49006 MARCKSL1 MARCKS-related protein yes yes 0 0 0 1.5 0.5 1 1 48.81 48.842 4 1.6024E-10 13900 20230619_1881_Aki_TMTPro18x_K_F2 106.3 99.939 44274 28303 33473 43477 51665 56951 52285 53721 62789 54854 63488 60757 63521 54321 51136 64059 72625 71056 40801 26059 35243 42801 52281 56466 52985 55117 63371 55574 65071 61223 64265 56769 53472 64568 69269 67421 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203070000 9747 3602 9214 18610;18611 14916 14916 1 9606 Homo sapiens -0.06298757163449409 GEGGILINSQGER Unmodified 1328.6684 0.66844211 21 A0A024QZ30;P31040;P31040-2;D6RFM5;B3KT34;Q0QF12;P31040-3;B4DYN5;A0A494C1T6;B7Z6J5 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 3 0 1 42.84 42.906 3 3.8569E-05 10860 20230619_1882_Aki_TMTPro18x_K_F3 94.688 79.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9748 21 9215 18612 14917 14917 1 9606 Homo sapiens 0.017254627529155186 GEGGTTNPHIFPEGSEPK Unmodified 1852.8592 0.85915601 4350 Q96FW1;Q659F9;F5H6Q1;B4DPD5;F5GYN4;F5H3F0;B3KUV5;Q96FW1-2;B4E053 OTUB1;DKFZp564E242 Ubiquitin thioesterase OTUB1 yes no 0 0 0 4.25 0.829 1 1 2 43.637 43.701 3 1.0454E-09 11132 20230619_1883_Aki_TMTPro18x_K_F4 135.27 117.78 382960 265000 375690 393490 382150 440420 413040 403380 444150 492520 530420 555340 489710 426490 445570 469350 508470 508180 353710 243800 382470 387290 397410 440770 415770 417100 454330 494740 538510 556250 499040 446420 457470 473130 485890 482260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 586790000 9749 4350 9216 18613;18614;18615;18616 14918;14919;14920 14919 3 9606 Homo sapiens -0.03315920446380005 GEGMPQYR Oxidation (M) 952.40727 0.40726539 409 A0A024R6S1;O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes no 0 1 0 3 0.816 1 1 1 29.502 29.583 2 0.071826 5588 20230619_1881_Aki_TMTPro18x_K_F2 64.757 51.769 39021 27992 37093 39105 46720 41893 42141 39877 50419 40629 51828 51471 53606 42825 47859 49495 59129 53855 36040 25730 37984 38607 47582 42123 43010 40916 50917 41370 53180 51484 54372 44824 49394 49873 56429 51124 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106750000 9750 409 9217 18617;18618;18619 14921 14921 259 1 9606 Homo sapiens -0.07084195427830764 GEGMPQYR Unmodified 936.41235 0.41235077 409 A0A024R6S1;O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes no 0 0 0 4 0.816 1 1 1 36.484 36.548 2 0.0042906 8118 20230619_1883_Aki_TMTPro18x_K_F4 116.88 91.712 91471 75262 84976 91199 92971 97788 95090 94296 116270 113290 115870 107360 135120 108640 98819 129500 141400 121320 84534 69038 87011 90886 96001 98330 96418 97081 117270 113330 119640 109360 135570 113160 103630 129260 134740 115390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155460000 9751 409 9217 18620;18621;18622 14922 14922 1 9606 Homo sapiens -0.05839891565221933 GEGPDVDVNLPK Unmodified 1238.6143 0.61428128 3815 Q09666;Q6ZQN2;Q13727 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 3.5 0.5 1 1 50.929 50.98 3 0.00010795 14399 20230619_1883_Aki_TMTPro18x_K_F4 110.08 62.716 96159 66470 83995 71833 78860 96906 99833 100280 131370 117850 119380 154430 152900 128090 126440 164700 150220 197470 88736 60950 86208 72504 83039 96158 100410 102650 131560 119300 124730 154160 153750 134970 130580 166610 143830 187030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 775810000 9752 3815 9218 18623;18624 14923 14923 1 9606 Homo sapiens 0.004518706013186602 GEGPEVDVNLPK Unmodified 1252.6299 0.62993134 3815 Q09666;Q8N274;Q6ZQN2 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 3.67 0.471 1 2 51.305 51.347 2;3 5.5428E-06 14722 20230619_1882_Aki_TMTPro18x_K_F3 140.24 114.77 128550 82303 99026 111570 108970 126670 128900 134430 161470 158790 165080 193600 203630 163750 180570 218290 211830 231000 118480 75665 103290 110450 113110 127080 129810 137420 162840 160220 171090 193950 205480 172820 185960 219060 202500 219200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 700040000 9753 3815 9219 18625;18626;18627 14924;14925 14924 2 9606 Homo sapiens 0.013721571183623382 GEGQLGPAER Unmodified 1012.4938 0.49377221 3447 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 0 0 2 0.816 1 1 1 33.578 33.62 2 1.7999E-05 7373 20230619_1880_Aki_TMTPro18x_K_F1 161.51 115.54 244190 136770 245600 237650 283110 293820 256900 280150 321080 287850 348140 336540 378030 311750 293970 218680 394240 329500 225360 126220 249840 232340 290340 292410 262670 287250 324460 292060 357030 338400 380840 317690 305460 227770 375780 312020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4147399999.9999995 9754 3447 9220 18628;18629;18630 14926;14927;14928 14926 3 9606 Homo sapiens -0.01197492601625072 GEGTEQEPSTTPEADDDGRR Unmodified 2145.9047 0.90466223 2834 D3DWL9;Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes no 0 0 1 1 0 1 31.125 31.125 3 5.3818E-05 6486 20230619_1880_Aki_TMTPro18x_K_F1 87.088 76.62 2030.1 1500.5 1978.3 2648.9 2496.3 1303.9 1324.2 2520.8 4570.9 1988.5 3970.2 3043.7 3652.9 3925.4 2109.5 4285.9 3930.1 4973.2 1875.7 1383.2 2022.6 2561.9 2516.6 1451 1506.2 2476 4436.8 2076.5 4076.6 3081.6 3672.6 4035.9 2285.3 4332.5 3749.9 4712.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15897000 9755 2834 9221 18631 14929 14929 1 9606 Homo sapiens -0.12245391512624337 GEGVSTVGYR Unmodified 1023.4985 0.49852324 4638 Q9P031;F8VNY5 CCDC59 Thyroid transcription factor 1-associated protein 26 yes no 0 0 0 4.5 0.5 1 1 36.701 36.747 2 8.7467E-07 8213 20230619_1883_Aki_TMTPro18x_K_F4 181.53 160.37 64299 50156 60774 56626 72728 84186 64079 65755 80349 70745 79848 89347 95821 74857 74149 94280 93439 88396 59411 45986 62183 57027 74434 82614 65631 68565 80916 71831 82688 89375 96231 78725 76953 94046 89180 84040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52793000 9756 4638 9222 18632;18633 14930;14931 14930 2 9606 Homo sapiens -0.012286084588595259 GEGYSNPNEGATVEIHLEGR Unmodified 2127.9821 0.98212469 3853 Q53GX4;Q2TA84;Q13451;B7Z8G2;Q13451-2 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes no 0 0 0 2 0 1 45.41 45.492 3 2.6883999999999997E-22 12363 20230619_1881_Aki_TMTPro18x_K_F2 172.99 170.56 25570 16460 23843 26066 23750 24726 24004 19992 29661 28543 28847 30145 33459 32332 19375 37353 44584 51483 23599 15160 24371 25499 24685 24994 24361 21004 29873 28458 29824 30612 33390 33555 21441 38181 42462 48724 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62331000 9757 3853 9223 18634 14932 14932 1 9606 Homo sapiens -0.03674708785729308 GEHAMITAR Oxidation (M) 1000.476 0.47601365 1580 A0A5F9ZHS8;H0YM30;Q68DA7-5;Q68DA7 FMN1 Formin-1 yes no 0 1 0 5 0 1 26.486 26.557 3 0.030587 4589 20230619_1885_Aki_TMTPro18x_K_F5 52.278 36.616 3911.2 2356 3915.3 4251.1 4396.1 4804.3 3725.1 4859.7 6402.8 5211.1 5796.5 5076.3 3786.6 3906.4 5164.2 4563.9 5764.1 3381.8 3610.7 2174.6 3985.3 4141.7 4515.6 4814.3 3880.7 4966.2 6341.7 5245.3 5883.4 5120.7 3999.9 4097.5 5256.1 4513 5492.7 3233.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1316500 9758 1580 9224 18635 14933 14933 1035 1 9606 Homo sapiens -0.024205311281320974 GEHGFIGCR Unmodified 1031.4607 0.46069794 1426 A0A384MEG1;Q16658;B3KTA3;B3KTM9;C9JFC0;A0A0A0MSB2;C9JPH9 FSCN1 Fascin yes no 0 0 0 5.5 1.5 1 1 2 2 1 1 32.444 32.501 2;3 2.9177E-06 6678 20230619_1886_Aki_TMTPro18x_K_F6 172.94 133.28 363250 185880 342550 323820 364780 331770 369320 377510 399820 450980 513810 489520 523040 424280 389300 504210 532910 476240 334950 171630 349810 315740 376740 335930 373270 384420 410330 452830 521850 493130 527080 444060 406760 503530 508110 452840 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 5713200000 9759 1426 9225 18636;18637;18638;18639;18640;18641;18642;18643 14934;14935;14936;14937 14936 4 9606 Homo sapiens -0.053773979253037396 GEHPGLSIGDVAK Unmodified 1278.6568 0.65681479 772 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;B3KQ05;B2RPK0 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 0 0 0 5.5 0.5 1 1 44.76 44.838 3 3.5237E-08 11650 20230619_1886_Aki_TMTPro18x_K_F6 145.81 114.93 455800 235120 356690 488780 408800 558780 405560 460940 624230 557460 566890 777910 868830 758330 466980 1131000 957800 1385500 419730 217680 372250 472920 421980 556740 415920 480270 621480 565330 598400 779500 858860 802840 512840 1142400 914640 1311700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1038299999.9999999 9760 772 9226 18644;18645 14938;14939 14939 2 9606 Homo sapiens 0.028632657295702302 GEHSIVYLK Unmodified 1044.5604 0.56039521 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 7.5 0.5 1 1 43.708 43.753 3 2.2816E-05 10770 20230619_1887_Aki_TMTPro18x_K_F7 158.76 124.96 262060 126950 202870 249460 191540 243820 214320 209800 309200 347550 367190 452360 500080 434840 253090 600200 520140 536190 241250 117470 211130 241490 201060 245950 217770 220500 312220 347130 380020 454010 494770 457630 278370 595810 495200 509900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1003099999.9999999 9761 3789 9227 18646;18647 14940;14941 14940 2 9606 Homo sapiens 0.03989742960266085 GEHSIVYLKPSYAFGSVGK Unmodified 2038.0524 0.052376507 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 1 3 0 1 53.786 53.839 4 8.6368E-07 15840 20230619_1882_Aki_TMTPro18x_K_F3 102.89 81.956 49709 42867 51140 52381 49679 50432 57633 59336 53605 55474 55763 44122 48417 42000 60478 52776 44043 45609 45991 39318 51814 52113 51867 51363 57547 59889 54934 55902 56746 45284 50204 43962 60339 52492 42310 43390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79855000 9762 3789 9228 18648 14942 14942 1 9606 Homo sapiens 0.07487241340686523 GEHTLQVK Unmodified 910.48723 0.48723027 1763 A0A8I5KW02;J3KTL8;A0A8I5KRS9;A6NHR9-3;A6NHR9-2;A6NHR9;A0A8I5KQZ7 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 0 0 0 6 0 1 35.365 35.419 3 0.00017675 7783 20230619_1886_Aki_TMTPro18x_K_F6 127.46 74.295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9763 1763 9229 18649 14943 14943 1 9606 Homo sapiens 0.02840614237675254 GEHVPGFCLPK Unmodified 1239.607 0.60702783 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 8 0 1 48.898 48.965 4 0.054203 13112 20230619_1888_Aki_TMTPro18x_K_F8 49.5 33.247 18312 12030 19679 19833 16276 17520 16814 18447 25147 20953 21152 24241 26189 23738 22653 29175 27154 28049 16922 11085 19822 19351 17199 17906 17191 18852 24982 21154 22128 24447 26419 24779 23382 29149 25944 26650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13050000 9764 2863 9230 18650 14944 14944 1 9606 Homo sapiens -0.003191404800872988 GEIAEAYADLVK Unmodified 1277.6503 0.65033243 2370 B3KP28;B4DGK3;G5E9A6;Q6P453;P51784;Q5JXD3 USP11 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 11 yes no 0 0 0 5 0 1 61.682 61.731 3 0.017777 18648 20230619_1885_Aki_TMTPro18x_K_F5 61.375 38.496 75853 62505 65518 76683 72160 76207 74935 73750 102980 57526 60165 50704 57136 45572 59642 61799 56648 54768 70064 57342 67575 76263 74551 77053 76225 75103 101460 58896 63552 51678 58526 48047 60452 61444 54216 52100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31801000 9765 2370 9231 18651 14945 14945 1 9606 Homo sapiens 0.022613277781374563 GEIAGPPDTPYEGGR Unmodified 1514.7001 0.70013617 3688 P61086;B4DIZ2;D6RDM7;P61086-3 UBE2K Ubiquitin-conjugating enzyme E2 K yes no 0 0 0 2.5 0.5 2 2 44.13 44.206 2;3 1.9875E-05 11753 20230619_1881_Aki_TMTPro18x_K_F2 78.902 69.898 139890 88590 133540 153880 159260 186030 159400 160110 197780 174820 188380 195860 202500 173420 172220 173360 210510 211550 129120 81701 136710 150310 163540 184950 161890 165760 198910 176610 194360 197050 204830 179680 177770 176370 201060 200530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 346940000 9766 3688 9232 18652;18653;18654;18655 14946;14947 14946 2 9606 Homo sapiens -0.03662589283840134 GEIETVK Unmodified 774.41233 0.41233399 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HLK8 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 4 0 1 41.536 41.579 2 8.537E-05 10226 20230619_1883_Aki_TMTPro18x_K_F4 141.78 21.137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9767 1723 9234 18656 14948 14948 1 9606 Homo sapiens 0.016104317064332463 GEIEVVTSSLPELYVEK Unmodified 1890.9826 0.98262519 3924 Q15269 PWP2 Periodic tryptophan protein 2 homolog yes yes 0 0 0 5 0 1 63.417 63.462 3 9.0156E-05 19509 20230619_1885_Aki_TMTPro18x_K_F5 91.657 73.74 30907 29599 29527 34436 29218 35637 33542 31621 37868 41146 34909 35793 43236 35396 36931 42975 42294 43455 28599 27126 30140 34392 30522 35854 33701 32845 38256 40915 36327 36559 43560 36942 37993 43073 40423 41265 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165540000 9768 3924 9235 18657 14949 14949 1 9606 Homo sapiens 0.0727731788147139 GEIFLDEK Unmodified 949.47566 0.47566253 4423 Q9BRX8-2;Q9BRX8 FAM213A Redox-regulatory protein FAM213A yes no 0 0 0 2.5 0.5 1 1 53.648 53.689 2;3 1.9045E-05 15769 20230619_1882_Aki_TMTPro18x_K_F3 140.5 86.296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9769 4423 9236 18658;18659 14950;14951 14951 2 9606 Homo sapiens -0.001096275763416088 GEIGDATPFNDAVNVQK Unmodified 1773.8533 0.85334235 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 0 4.5 0.5 1 1 55.544 55.581 3 0.004231 16470 20230619_1883_Aki_TMTPro18x_K_F4 68.576 57.962 93719 70561 96285 89002 83442 104180 92551 90206 110190 105670 114430 109600 107990 98355 103240 116210 119060 116240 86636 64774 97366 88580 88044 103840 93378 93541 111410 106110 116890 110730 110250 102740 106010 116460 113740 110410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133080000 9770 2484 9237 18660;18661 14952 14952 1 9606 Homo sapiens -0.002630189580258957 GEIPALPPCK Unmodified 1080.5638 0.56376603 2339 Q96CP5;B3KM34;O75439;G3V0E4;Q9UG64;B3KQ85;B4DM90 PMPCB;DKFZp586I1223 Mitochondrial-processing peptidase subunit beta yes no 0 0 0 8 0 1 50.89 50.967 3 0.091826 13929 20230619_1888_Aki_TMTPro18x_K_F8 42.001 15.487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9771 2339 9238 18662 14953 14953 1 9606 Homo sapiens 0.026706697426106984 GEKPNPLR Unmodified 909.50321 0.50321468 3749 V9HW44;P68402;J3KNE3 HEL-S-303;PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta yes no 0 0 1 5.33 3.09 1 1 1 35.741 35.761 3 0.012172 7749 20230619_1888_Aki_TMTPro18x_K_F8 86.011 61.667 675800 438780 675460 725820 872600 865700 759310 781150 914560 816150 940730 851140 890010 706380 796180 590000 945500 696850 624080 404340 689290 710750 887170 862680 777110 804700 923750 824220 961000 857220 905170 727670 818200 601640 901480 661650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1843199999.9999998 9772 3749 9239 18663;18664;18665 14954;14955 14955 2 9606 Homo sapiens 0.04484320474557535 GELIHVFNK Unmodified 1055.5764 0.57637963 613 A0A090N7U2;A0A024RA81;X6RM59;Q9H0P0-3;Q9H0P0-2;Q9H0P0-1;Q9H0P0 NT5C3;NT5C3A 5'-nucleotidase;Cytosolic 5'-nucleotidase 3A yes no 0 0 0 1 0 1 50.878 50.878 3 0.00020205 14724 20230619_1880_Aki_TMTPro18x_K_F1 114.84 88.327 44600 34316 36786 45473 38369 55989 50965 52415 64145 49681 51006 57785 55554 50292 48193 67751 63697 74614 41165 31515 38120 45123 40212 55686 51043 53714 64028 50633 53191 58058 56254 53042 50104 68118 60871 70756 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44703000 9773 613 9240 18666 14956 14956 1 9606 Homo sapiens 0.0508144919717779 GELPDFQDGTK Unmodified 1205.5564 0.55643205 2670 B7SBB1;O00170;D0EKE4;A5JGZ4;A0A804HKH9;D0EKE6;D5LTB3;C8CK04;C8CHN4;C0JXB8;D0EKE5;C0JXB9;C8CK05;A0A804HJ38;A0A804HIX8;D2CVN5;E9PMH2;V9GYQ3;A0A804HKK3;A0A804HKP8;A0A804HJ46;D0EKE7;A8BQF1 AIP AH receptor-interacting protein;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 2.5 0.5 1 1 51.514 51.569 2 1.5477E-12 14820 20230619_1882_Aki_TMTPro18x_K_F3 214.82 168.69 83415 65818 73217 81557 75777 97530 89107 82577 99348 94102 102700 108030 105660 96853 104970 103280 109150 119450 77037 60398 75337 81262 79005 97031 89376 85728 100750 94939 105390 108640 107760 100600 106970 104600 104460 113250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76872000 9774 2670 9241 18667;18668 14957 14957 1 9606 Homo sapiens -0.03812391324117925 GELQNWPDLLPK Unmodified 1408.7351 0.73506511 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;Q92973-3;A0A7P0T944;A0A7P0T9C0 TNPO1 Transportin-1 yes no 0 0 0 7.5 0.5 1 1 62.693 62.723 3 0.034077 18980 20230619_1888_Aki_TMTPro18x_K_F8 49.333 26.416 74524 74629 83978 75996 72090 81576 74371 85331 77265 83312 85752 78265 85146 73357 91679 102190 94220 94228 69079 68303 84285 76785 75866 82187 75037 86823 78930 84123 87536 79600 87239 77348 93311 101750 90125 89583 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 344260000 9775 629 9242 18669;18670 14958 14958 1 9606 Homo sapiens 0.047046983147765786 GELQYRPSR Unmodified 1104.5676 0.56760585 3976 Q4KMP7;Q4KMP7-2 TBC1D10B TBC1 domain family member 10B yes no 0 0 1 8 0 1 33.115 33.115 3 0.0011656 6745 20230619_1888_Aki_TMTPro18x_K_F8 100.79 73.198 69311 50153 66288 71418 83643 88479 84505 80315 98514 85987 106010 98670 89872 76123 87632 85748 113610 98649 64021 46108 67884 70572 85518 87976 85573 82772 99793 87003 107650 98843 92150 79789 90565 86748 108350 93615 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28419000 9776 3976 9243 18671 14959 14959 1 9606 Homo sapiens 0.019504755606931212 GELSGDFEK Unmodified 980.44509 0.44509068 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;A0A0S2Z377 ANXA6 Annexin A6;Annexin no no 0 0 0 2.5 0.5 1 1 47.889 47.964 2 1.509E-05 13185 20230619_1882_Aki_TMTPro18x_K_F3 169.44 130.63 573870 483070 514930 541390 698670 730250 615470 603800 680290 720810 828130 859510 871030 708210 671750 956700 966840 963590 530280 442750 530840 544470 708820 721450 627490 628660 695610 726410 844550 861440 878170 748720 704450 956860 922190 915160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1022899999.9999999 9777 1062;1064 9244 18672;18673 14960;14961 14961 2 9606 Homo sapiens -0.045914059613664904 GELSTLLYNTHPYR Unmodified 1662.8366 0.83657007 1310 A0A1W2PR73;Q969N2;A0A1W2PPR6;A0A1W2PNP0;A0A1W2PPC3;A0A1W2PP57;Q969N2-5;Q969N2-4;A0A1W2PPS0;A0A1W2PP53;Q969N2-2;A0A1W2PRZ8;B7ZAP3;A0A1W2PQ52;B7Z1F1;B7Z1N3;B7Z3L1;B7Z4T7;A0A1W2PPQ7;A0A1W2PSC5;A0A1W2PQY1;A0A1W2PPK4;A0A1W2PP13 PIGT GPI transamidase component PIG-T yes no 0 0 0 1.5 0.5 1 1 53.584 53.598 3 1.4614E-08 16014 20230619_1881_Aki_TMTPro18x_K_F2 147.31 108.02 49890 35463 51420 54868 47870 49226 56172 58521 64434 58562 56951 53070 57980 48041 59367 66352 55883 63037 46106 32638 52071 53732 50197 50405 56424 59142 64869 59013 58816 53993 59199 50699 60195 66174 53552 59881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205140000 9778 1310 9245 18674;18675 14962 14962 1 9606 Homo sapiens 0.03166524946686877 GELVESLKR Unmodified 1029.5819 0.58185894 2161 Q68CX8;A8KAQ6;B4E3W1;Q9Y679-3;Q9Y679 DKFZp686P12272;AUP1 Ancient ubiquitous protein 1 yes no 0 0 1 8 0 1 45.75 45.789 3 0.0052444 11786 20230619_1888_Aki_TMTPro18x_K_F8 74.267 28.27 91840 73315 88982 100610 108090 124750 120210 116560 130400 122640 115740 99064 118190 89812 113810 100080 95608 85834 84887 67347 91013 99638 111130 124090 120780 119770 131700 122920 119450 101330 120240 93545 114720 99681 91585 81712 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34217000 9779 2161 9246 18676 14963 14963 1 9606 Homo sapiens 0.06825127989009161 GELVGGLDIVK Unmodified 1098.6285 0.62847478 1180 A0A140VJK1;O76003 GLRX3 Glutaredoxin-3 yes no 0 0 0 6 0.816 1 1 1 59.022 59.079 3 0.00027512 17720 20230619_1886_Aki_TMTPro18x_K_F6 104.79 55.444 135910 124900 108890 126340 125490 157510 129670 144320 159190 170110 129390 124750 159760 128640 146890 167700 129700 146080 125560 114340 113240 127930 129410 156620 131420 148930 159520 169170 135470 128840 161420 134690 148770 166630 124370 138910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 436740000 9780 1180 9247 18677;18678;18679 14964;14965 14965 2 9606 Homo sapiens 0.08310567820285542 GELVTASTTCEK Unmodified 1294.6075 0.60748134 4683 Q9ULD2-2;Q9ULD2;B4E246;Q9ULD2-4;Q9ULD2-7;Q9ULD2-3;Q9ULD2-6 MTUS1 Microtubule-associated tumor suppressor 1 yes no 0 0 0 4 0 1 44.042 44.086 3 0.0064562 11308 20230619_1883_Aki_TMTPro18x_K_F4 75.088 48.381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9781 4683 9248 18680 14966 14966 1 9606 Homo sapiens -0.02803810341561075 GELVTNCFK Unmodified 1066.5117 0.51173046 898 A0A590UJ56;A0A590UJR3;A0A590UJ50;A0A090N7U0;Q13616;B3KTW0;A0A590UJC4;B4DLA3;A0A590UK34;Q75MQ1;B3KU45 CUL1 Cullin-1 yes no 0 0 0 7 0 1 50.255 50.336 2 0.044406 13735 20230619_1887_Aki_TMTPro18x_K_F7 72.928 41.556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9782 898 9249 18681 14967 14967 1 9606 Homo sapiens -0.0188649367112248 GEMDSFSLISDSAYVAQNAAR Unmodified 2231.0165 0.016461285 4228 Q8N3C0;B4DR60 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes no 0 0 0 6 0 1 62.789 62.838 3 8.0386E-05 19382 20230619_1886_Aki_TMTPro18x_K_F6 75.533 71.141 73105 56401 73029 77598 63023 84950 89555 78448 93001 73350 80203 85974 92304 84465 94898 93302 92113 109960 67574 51818 74103 76700 67068 85134 88833 80506 93962 74843 83497 86678 93988 87641 96295 94556 88283 104200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16224000 9783 4228 9250 18682 14968 14968 1 9606 Homo sapiens -0.04980628689099831 GENIEDIPK Unmodified 1013.5029 0.50293991 4176 Q7Z5U5;Q86WR0;G3V121;B7Z2L8 CCDC25 Coiled-coil domain-containing protein 25 yes no 0 0 0 2 0 1 46.826 46.902 2 0.025996 13007 20230619_1881_Aki_TMTPro18x_K_F2 74.376 31.555 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9784 4176 9251 18683 14969 14969 1 9606 Homo sapiens -0.003271440359526423 GENLVSMTVEGPPPK Unmodified 1553.7759 0.77594365 2604 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q9UIS4;Q15182;P14678-2;P63162;P14678;P63162-2;P14678-3;Q53HE7;Q6LBS1 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated proteins B and B';Small nuclear ribonucleoprotein-associated protein N yes no 0 0 0 5.5 1.12 1 1 1 1 55.159 55.213 3 1.7267E-10 16046 20230619_1886_Aki_TMTPro18x_K_F6 148.57 104.58 142510 119550 125650 135860 132660 154310 144890 146390 163430 173500 171980 179450 189830 155220 156590 206280 181620 212710 131670 109590 129220 136140 137680 154470 145980 150810 165890 174050 176860 181110 191560 163660 161490 206670 173750 201850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 963040000 9785 2604 9252 18684;18685;18686;18687 14970;14971 14971 2 9606 Homo sapiens 0.02120671572106403 GENNLRPR Unmodified 954.49953 0.49952629 1038 H0Y9J8;A0A0G2JNH5;A0A0G2JP78;A0A0G2JPT5;O75943-3;O75943-4;O75943-2;O75943 RAD17 Cell cycle checkpoint protein RAD17 yes no 0 0 1 6 0 1 26.53 26.566 3 0.0080845 4617 20230619_1886_Aki_TMTPro18x_K_F6 77.923 50.398 13414 9698 15447 17408 17585 21660 15280 18747 16452 12207 17870 20665 14422 17025 15903 9159.6 20972 19451 12410 8942.7 15568 16985 18048 21492 15593 19174 16729 12949 18140 20452 14935 17253 16385 9932.8 20006 18371 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3784600 9786 1038 9253 18688 14972 14972 1 9606 Homo sapiens 0.020456507006997526 GENSWFSTQVDTVATK Unmodified 1768.8268 0.82679325 1704 P08195-4;P08195-5;P08195;P08195-3;A0A7P0Z4P5;A0A7P0TAN7;A0A7P0Z4A0;A0A7P0T9F7;F5GZS6;P08195-2;A0A7P0TBF8;B4E2Z3;F5H056;F5GZI0;A0A7P0TAS6;A0A024R599;A0A7P0T8U7;A0A7P0T8F1;H0YH36 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 0 6.5 0.5 1 1 58.793 58.85 3 1.1491E-11 17328 20230619_1887_Aki_TMTPro18x_K_F7 165.58 146.99 110970 90568 112950 122060 97107 105310 101640 108320 122100 154470 156570 184640 173980 151860 184840 197890 170720 210020 102620 83172 114360 120450 102250 107840 102960 111720 124770 154480 160030 184900 177530 160150 187080 198750 163750 199210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 741280000 9787 1704 9254 18689;18690 14973;14974 14974 2 9606 Homo sapiens -0.026867078493523877 GENVTVENQPR Unmodified 1241.6 0.60002819 4113 Q6NX51;Q96A65;B7Z321;Q8TAR2;Q96A65-2 EXOC4 Exocyst complex component 4 yes no 0 0 0 2 0 1 33.633 33.69 2 6.8729E-09 7139 20230619_1881_Aki_TMTPro18x_K_F2 186.87 152.18 14280 6688.3 18258 19494 20847 27535 16237 21492 22552 14745 22820 26812 28877 22778 21001 11945 27887 30887 13199 6237.5 18264 18706 21364 27052 16856 22184 22602 15648 23683 26508 28895 23088 21820 13269 26636 29125 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14977000 9788 4113 9255 18691 14975 14975 1 9606 Homo sapiens -0.011107818269465497 GEPAAAAAPEAGASPVEK Unmodified 1621.7948 0.79476484 3524 P29966;Q6NVI1 MARCKS Myristoylated alanine-rich C-kinase substrate yes no 0 0 0 3 1.29 1 1 2 1 1 43.942 43.999 2;3 7.1861E-24 11361 20230619_1882_Aki_TMTPro18x_K_F3 214.23 195.49 450420 340770 413920 482920 497460 560720 447790 423780 614800 520850 714170 665700 640510 593040 603900 635990 796010 787740 416020 313210 425140 476680 509280 557840 459590 445240 620230 526020 724390 667090 654790 616340 625490 646810 759700 746630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5213600000 9789 3524 9256 18692;18693;18694;18695;18696;18697 14976;14977 14977 2 9606 Homo sapiens 0.00873924467487086 GEPGAAPLSAPAFSLVFPFLK Unmodified 2115.1405 0.14046323 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 5 0 1 67.203 67.246 3 1.6481999999999998E-22 21040 20230619_1885_Aki_TMTPro18x_K_F5 170.5 147.01 24047 20113 21500 23338 14854 20714 23302 23815 19814 25626 29936 30361 25799 24767 23927 25848 29864 30353 22219 18440 21970 23278 16209 21210 22917 24170 20791 25922 30060 30411 26392 25780 24702 26207 28519 28780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58065000 9790 2863 9257 18698 14978 14978 1 9606 Homo sapiens 0.12749861931297346 GEPGPNDVR Unmodified 939.44101 0.44100836 4130 Q6PKG0;A0A0B4J210 LARP1 La-related protein 1 yes no 0 0 0 1.5 0.5 1 1 31.817 31.849 2 0.060379 6674 20230619_1880_Aki_TMTPro18x_K_F1 78.192 50.085 17532 9057.8 22344 20274 24080 31708 18853 25699 30450 19889 26663 39403 31599 30654 31842 14883 34651 31916 16211 8396.5 22313 19681 24788 31017 19695 26496 30181 21025 27840 38745 32132 31067 32430 16228 33107 30144 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59638000 9791 4130 9258 18699;18700 14979 14979 1 9606 Homo sapiens -0.03113450664420725 GEPPLPEEDLSK Unmodified 1309.6402 0.64016167 2400 Q5BKY2;Q6IB98;Q53HR0;Q53HG0;B3KS98;O15372 EIF3H;EIF3S3 Eukaryotic translation initiation factor 3 subunit H yes no 0 0 0 2.33 0.471 2 1 50.772 50.83 2;3 2.0384E-06 14793 20230619_1881_Aki_TMTPro18x_K_F2 150.46 110.46 305710 231650 268090 291240 324020 377390 337150 320880 398550 355380 345390 368420 393650 286610 337380 406680 384980 364290 282260 212630 276490 290290 332810 373710 340960 332630 400450 357810 359120 370640 397290 304840 347060 404160 367750 346530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 616450000 9792 2400 9259 18701;18702;18703 14980;14981;14982 14980 3 9606 Homo sapiens -0.0022727994705746823 GEPSIPSNR Unmodified 955.47231 0.47230849 120 A0A024R104;Q12860-2;Q12860 CNTN1 Contactin-1 yes no 0 0 0 3.5 0.5 1 1 35.192 35.24 2 0.0023169 7654 20230619_1883_Aki_TMTPro18x_K_F4 107.57 58.478 36986 27510 48332 35350 22307 22991 23867 25681 29586 35496 56068 66103 48588 47116 51636 29593 82645 63999 34268 25259 47662 34930 25241 24264 24244 26353 30849 36251 56024 64988 50034 48304 54026 32022 78645 60490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32686000 9793 120 9260 18704;18705 14983;14984 14984 2 9606 Homo sapiens -0.007208776303286868 GEPWFHGK Unmodified 956.45045 0.45045083 2520 B4DL02;P29353-3;P29353-2;P29353-7;P29353;P29353-6;H0Y539;X6R6D0;Q59HB0;P29353-5 SHC1 SHC-transforming protein 1 yes no 0 0 0 8 0 1 44.586 44.605 3 0.0045676 11339 20230619_1888_Aki_TMTPro18x_K_F8 92.439 57.907 57347 51342 52761 54382 55382 63500 63139 62532 71593 57778 72640 69557 67931 58886 65702 66165 71125 73460 53023 47022 54034 54820 57561 63509 63475 63826 72424 59026 74255 69747 69383 61478 67152 66784 68016 69687 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25950000 9794 2520 9261 18706 14985 14985 1 9606 Homo sapiens -0.02951637588239464 GEQPPRPVVPR Unmodified 1230.6833 0.68330431 30 A0A087WVT1;A0A024QZB9;Q96MX3 ZNF48;ZNF553 Zinc finger protein 48 yes no 0 0 1 7.5 0.5 1 1 34.05 34.088 3 0.00059227 6964 20230619_1887_Aki_TMTPro18x_K_F7 93.258 58.158 30008 24833 29916 34335 32206 34041 33703 36424 60526 37804 40359 37381 41168 37957 34792 43612 46617 44820 27749 22810 30456 33882 33353 34496 34708 37078 59260 38178 42354 38012 41732 39426 36191 43778 44476 42564 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24201000 9795 30 9262 18707;18708 14986 14986 1 9606 Homo sapiens 0.07718999411531513 GEQSAGENSLEDLTK Unmodified 1576.7217 0.72165947 935 A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBF7 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 1.5 0.5 1 1 49.758 49.758 3 3.5078E-09 14380 20230619_1881_Aki_TMTPro18x_K_F2 122.08 101.96 56302 47509 57644 58422 51294 63083 61926 58607 74479 73314 82517 76546 82001 70641 66542 78808 89184 93616 52082 43582 58364 58171 54128 63323 62223 60589 75467 73421 84198 77382 82995 73520 69254 79853 85142 88743 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17607000 9796 935 9263 18709;18710 14987;14988 14988 2 9606 Homo sapiens -0.04363249045741213 GEQVPLHGGSPQVTVTGPSR Unmodified 2002.0232 0.023201643 2967 F5H0V4;Q9HAP2-4;Q9HAP2-2;Q9HAP2 MLXIP MLX-interacting protein yes no 0 0 0 7 0 1 41.017 41.085 3 4.6932E-16 9697 20230619_1887_Aki_TMTPro18x_K_F7 151.96 140.04 14747 11058 17270 18145 12599 12798 13539 13751 14663 17438 19027 15554 20229 16980 20164 20398 25403 23642 13649 10183 17263 17665 13466 13367 13650 14091 15059 17365 19349 15943 20608 17660 20794 20622 24242 22427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18579000 9797 2967 9264 18711 14989 14989 1 9606 Homo sapiens 0.062270970443705664 GEQVSQNGLPAEQGSPR Unmodified 1752.8391 0.83908927 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8;Q01082-2;Q8WYB3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 3 0 1 38.145 38.198 3 3.0985E-09 8843 20230619_1882_Aki_TMTPro18x_K_F3 129.32 118.98 24773 23845 23410 23474 28757 28409 29194 28387 33360 25199 28411 29378 29071 27404 24992 25981 32006 25650 22922 21821 23972 23821 29438 28374 29532 28917 33527 25782 29416 29565 29482 28241 25874 26119 30512 24389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45509000 9798 2337;3778;3779 9265 18712 14990 14990 1 9606 Homo sapiens -0.007216713863044788 GERDSQTQAILTK Unmodified 1445.7474 0.74742071 2750 Q13098-7;Q13098;Q13098-5;C9JFE4;A8K070;A0A096LPJ3;A0A096LP07;B4DND6;Q13098-6;Q59F65 GPS1 COP9 signalosome complex subunit 1 yes no 0 0 1 5.5 0.5 1 1 39.894 39.983 3 0.00057305 9531 20230619_1886_Aki_TMTPro18x_K_F6 93.026 55.914 59106 57444 63545 55184 63448 56872 57357 61239 67487 74087 77152 63463 79721 62987 67087 87438 77335 63195 54752 52555 64102 56012 65645 57563 58552 62581 68615 73852 78707 64977 80651 66274 69116 86064 73796 60332 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35145000 9799 2750 9266 18713;18714 14991 14991 1 9606 Homo sapiens 0.04237689987166959 GESAEDKEHEEGRDSEEGPR Unmodified 2241.937 0.93702499 4171 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7EPS6;A0A087WX58 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 0 0 2 1 0 1 29.821 29.821 5 6.2931E-16 5955 20230619_1880_Aki_TMTPro18x_K_F1 157.97 153.53 8074.1 4565.1 7184.2 9330.7 10821 10330 8165 9101.9 9595.7 9298.6 12098 10692 7976.1 6412.7 9911 7346.4 11040 6839.1 7444.7 4223 7436.2 9031.5 10872 10338 8435.5 9388.1 9790.2 9426 12106 10645 8360.2 6804.2 10091 7349.6 10523 6516.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38304000 9800 4171 9267 18715 14992 14992 1 9606 Homo sapiens -0.1342660410955432 GESDGAYIHR Unmodified 1103.4996 0.49958587 3080 H6QX63;I3L0U5;Q6PK04 CCDC137 Coiled-coil domain-containing protein 137 yes no 0 0 0 2 0 1 30.897 30.962 3 2.5179E-20 6076 20230619_1881_Aki_TMTPro18x_K_F2 226.09 183.35 17191 11032 15901 20582 20256 24084 19558 18738 26760 21586 22440 27141 25270 23657 20292 28001 35544 29099 15865 10184 16357 20018 20707 23946 19975 19598 26673 21851 23376 27174 25501 24734 21602 28107 33816 27650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41245000 9801 3080 9268 18716 14993 14993 1 9606 Homo sapiens -0.04802394089961126 GESDPAYQQYQDAANNLR Unmodified 2038.8981 0.89806071 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 3.5 0.5 1 1 49.415 49.471 3 4.1303999999999996E-19 13899 20230619_1882_Aki_TMTPro18x_K_F3 188 180.96 94584 67795 89110 97586 86180 95452 89710 95197 111330 103000 95812 97125 129390 99742 91426 124800 110670 115080 87349 62337 90974 96046 89892 96653 90951 97480 111630 103530 100470 98999 129140 104170 94882 124370 105740 109390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 532770000 9802 909 9269 18717;18718 14994;14995 14994 2 9606 Homo sapiens -0.07983239882582893 GESDPAYQQYQDAANNLREDYK Unmodified 2574.1259 0.12588839 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 1 3.5 0.5 1 1 53.62 53.656 3 8.138E-31 15819 20230619_1882_Aki_TMTPro18x_K_F3 210.38 198.59 110820 95960 114920 102800 102790 118400 121030 123280 124750 173380 159540 171280 170880 145640 148360 200210 194890 196740 102540 87907 116150 103550 108230 118690 121160 126900 128510 172360 162620 173080 173020 153960 154120 199950 186030 186900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174940000 9803 909 9270 18719;18720 14996;14997 14996 2 9606 Homo sapiens -0.09820951536039502 GESFYQDR Unmodified 1000.425 0.42502394 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 38.356 38.414 2 9.985E-05 9045 20230619_1881_Aki_TMTPro18x_K_F2 180.45 142.89 244610 185640 205950 232470 280860 287310 269180 267670 329600 287470 335430 330150 338300 291880 292990 353580 375270 339330 225780 170400 213690 231610 285490 285970 273900 275310 332460 290880 343910 332080 343140 305530 303590 353370 358010 322580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 431890000 9804 3650 9271 18721;18722 14998;14999 14998 2 9606 Homo sapiens -0.07517156901337785 GESGQSWPR Unmodified 1002.4519 0.45190739 647 A0A024RB32;Q15185-4;Q15185;A0A087WYT3;B3KUY2;Q15185-3;B4DDC6 PTGES3 Prostaglandin E synthase 3 yes no 0 0 0 4 0.816 1 1 1 35.966 36.018 2 1.6435E-06 7923 20230619_1885_Aki_TMTPro18x_K_F5 134.66 95.116 211690 122800 148310 189800 206520 241200 166730 209610 343550 254590 280590 399250 385150 332590 198770 449080 531980 508160 194910 113120 157040 186670 209520 239140 175880 217450 337320 259540 295890 396400 381410 351390 225140 451860 505610 482120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1165800000 9805 647 9272 18723;18724;18725 15000;15001;15002 15002 3 9606 Homo sapiens -0.04922048290143266 GESIPIR Unmodified 770.42865 0.42865276 252;2532 B4DLT1;O75436;A8K3C1;Q4G0F5;A0A024R3L9 VPS26A;VPS26B Vacuolar protein sorting-associated protein 26A;Vacuolar protein sorting-associated protein 26B no no 0 0 0 4.5 0.5 1 1 38.685 38.777 2 0.0035273 9034 20230619_1883_Aki_TMTPro18x_K_F4 120.52 22.388 111230 83747 88014 101560 113340 135090 111040 110570 152540 121590 141330 154730 159140 134130 120790 160030 184070 164360 102620 76848 91814 101510 115880 133470 113340 114940 152510 123400 146350 154890 160100 140390 127190 160530 175370 156140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121880000 9806 2532;252 9273 18726;18727 15003;15004 15003 2 9606 Homo sapiens 0.034255576631949225 GESLADSVQTMSCYADVVVLR Unmodified 2299.0824 0.08243236 2980 F8VPD4;P27708;Q53SY7;H7C2E4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 7 0 1 64.021 64.051 3 1.4965E-30 19668 20230619_1887_Aki_TMTPro18x_K_F7 214.19 167.78 24365 20595 28370 26335 20252 28520 24790 20414 38782 31221 32580 32737 31557 30844 28824 44443 34431 35452 22565 18900 28357 26151 21866 28475 25163 21726 38440 31057 33667 33125 32149 32562 29757 43892 32896 33764 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131080000 9807 2980 9274 18728 15005 15005 1 9606 Homo sapiens -0.015145558385938784 GESPVDYDGGR Unmodified 1150.4891 0.48908076 1478 A0A384NPU5;Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 0 1.5 0.5 1 1 37.824 37.856 2 3.9545E-09 9094 20230619_1880_Aki_TMTPro18x_K_F1 190.03 117.24 583300 444170 525810 528110 645630 687640 633630 626040 769180 698660 806260 834980 828520 716760 718660 907110 919850 866050 538690 407480 540720 528620 660940 681930 643740 645680 777200 706540 826530 837740 839960 753070 744840 905670 877790 823210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2227600000 9808 1478 9275 18729;18730 15006;15007 15006 2 9606 Homo sapiens -0.08014421535062866 GESQTDIEITR Unmodified 1247.5994 0.59935949 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 1.5 0.5 1 1 39.636 39.671 2 0.031432 9989 20230619_1880_Aki_TMTPro18x_K_F1 68.536 44.381 15442 10863 11901 13603 14442 16715 15015 13526 21242 15982 20366 24041 19185 19710 14177 21760 20389 20792 14239 9973.9 12434 13549 14843 16591 15291 14113 21228 16281 20899 23886 19409 20556 14889 21760 19451 19757 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55328000 9809 2435 9276 18731;18732 15008 15008 1 9606 Homo sapiens -0.014536212666826032 GESSASSPEEPEEITCLEK Unmodified 2077.8998 0.89975977 3790;4031 Q5CZB5;Q02952-3;Q02952-2;Q02952 DKFZp686M0430;AKAP12 A-kinase anchor protein 12 no no 0 0 0 2 0 1 51.427 51.472 3 3.8852E-32 15090 20230619_1881_Aki_TMTPro18x_K_F2 181.51 167.2 28014 19036 17141 20510 11253 22088 17477 18246 26975 28023 27604 48596 42061 45887 24666 67806 60369 78810 25793 17456 18258 20614 12448 22111 17560 19181 26986 28435 29045 48307 41764 48538 27605 68248 57543 74670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60249000 9810 4031;3790 9277 18733 15009 15009 1 9606 Homo sapiens -0.09607411699516888 GESVCLDR Unmodified 934.41783 0.41783007 3702 P62072 TIMM10 Mitochondrial import inner membrane translocase subunit Tim10 yes yes 0 0 0 2 0 1 36.47 36.529 2 0.00058703 8280 20230619_1881_Aki_TMTPro18x_K_F2 160.63 65.968 128120 84725 123660 133760 159600 183390 131250 145880 206050 154120 178740 199900 208460 177480 142640 154090 247670 222410 118290 78021 126590 131590 162400 180730 136310 151790 204470 156870 186000 199970 208800 182660 152030 159030 235780 210620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195100000 9811 3702 9278 18734 15010 15010 1 9606 Homo sapiens -0.05200212773399926 GETAVPGAPEALR Unmodified 1266.6568 0.65681479 1964 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 0 0 0 3.5 0.5 1 1 44.301 44.36 2 2.6822E-07 11428 20230619_1883_Aki_TMTPro18x_K_F4 151.07 118.46 79168 63941 75145 76738 70934 83070 86487 83148 85278 104540 104160 104180 104480 93191 91976 112270 120700 117970 73167 58651 76627 76548 74453 83521 86288 85512 87781 104450 105990 105400 106080 97497 95443 112780 115190 112000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149230000 9812 1964 9279 18735;18736 15011 15011 1 9606 Homo sapiens 0.03415265729540806 GETCHTPLYK Unmodified 1204.5547 0.55465791 176 K7EMM9;A0A024R1Y9;P78357 CNTNAP1 Contactin-associated protein 1 yes no 0 0 0 6 0 1 37.722 37.797 3 0.0017931 8635 20230619_1886_Aki_TMTPro18x_K_F6 70.552 54.327 19588 13307 22525 23234 27323 37013 28658 24343 34687 20787 30293 36997 29627 31869 28651 31136 37682 42307 18116 12269 22727 22799 28090 36053 28986 25667 34759 21736 31306 36642 30272 32977 29664 31919 35999 40049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33680000 9813 176 9280 18737 15012 15012 1 9606 Homo sapiens -0.03943723613701877 GETDLIQK Unmodified 902.47091 0.4709115 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJH8;A0A804HLK8 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 4 0.816 1 1 1 45.647 45.712 2 0.0020069 12034 20230619_1883_Aki_TMTPro18x_K_F4 147.34 86.654 336540 230390 306390 342040 342220 373860 364430 367060 464060 407050 477530 513140 478500 424750 397720 379240 554270 555280 310650 211960 314510 336520 353420 375360 369240 376580 467400 412570 489470 512780 484740 438790 414350 391770 528820 525540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 574880000 9814 1723 9281 18738;18739;18740 15013 15013 1 9606 Homo sapiens 0.015774882809068913 GETLGIIGLGR Unmodified 1084.6241 0.6240581 3029 X5D7T7;H0Y8U5;X5D8Y5;Q4KMQ8;Q13363-2;Q13363;D6RAX2 CTBP1 C-terminal-binding protein 1 yes no 0 0 0 1 0 1 56.619 56.619 2 0.0069299 17109 20230619_1880_Aki_TMTPro18x_K_F1 99.688 70.601 99325 78126 84931 113130 80213 96281 104730 102310 127370 118010 114250 116570 132470 112990 122890 136540 121970 133660 91711 71815 87590 111080 84472 98731 104860 104570 127950 118410 118660 118300 134170 117920 125160 136630 116790 126940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50519000 9815 3029 9282 18741 15014 15014 1 9606 Homo sapiens 0.08513103397376653 GETLGLIGFGR Unmodified 1118.6084 0.60840804 3668 P56545;P56545-3;P56545-2 CTBP2 C-terminal-binding protein 2 yes no 0 0 0 1.5 0.5 1 1 59.046 59.053 2 0.00054725 18138 20230619_1880_Aki_TMTPro18x_K_F1 115.13 76.161 90330 74129 93512 98993 93322 100840 102670 97410 114400 120490 118070 119780 126910 117070 121490 129190 132680 146530 83552 68067 94758 97941 97175 101750 103360 100390 116090 120520 121380 121530 129060 121490 124300 130580 126930 138940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135840000 9816 3668 9283 18742;18743 15015 15015 1 9606 Homo sapiens 0.053848168803369845 GETLPTEAR Unmodified 972.48762 0.4876242 4219 Q8IZH2-2;Q8IZH2;Q8IZH2-3 XRN1 5'-3' exoribonuclease 1 yes no 0 0 0 2 0 1 36.441 36.499 2 0.0031296 8312 20230619_1881_Aki_TMTPro18x_K_F2 113.18 89.021 22218 15916 21874 25948 28329 29077 29391 29930 37749 30111 32721 32713 33778 30223 26769 33449 41452 37692 20526 14657 22372 25404 28938 29175 29821 30519 37760 30518 33844 33013 34137 31428 28188 33780 39493 35769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31814000 9817 4219 9284 18744 15016 15016 1 9606 Homo sapiens 0.00027989166835595825 GETPPHTFCK Unmodified 1172.5284 0.52844316 4081 Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7 DENND4C DENN domain-containing protein 4C yes no 0 0 0 6 0 1 38.201 38.276 3 4.614E-07 8826 20230619_1886_Aki_TMTPro18x_K_F6 140.16 118.7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9818 4081 9285 18745 15017 15017 1 9606 Homo sapiens -0.05091992785196453 GETVNDCHAEIISR Unmodified 1599.7311 0.73111872 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 2.5 0.5 1 1 36.448 36.505 3 6.2776E-29 8277 20230619_1881_Aki_TMTPro18x_K_F2 253.46 234.63 156080 117790 146320 152120 145370 187070 158910 147010 188450 195790 209420 254940 247450 218080 174680 279230 282040 280260 144180 108150 149500 151220 151710 185530 160380 154330 191230 197100 215760 254830 248050 229310 185400 279350 268800 266190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 532560000 9819 1718;4020 9286 18746;18747 15018;15019 15018 2 9606 Homo sapiens -0.04475759241222477 GEVAQMAAYYEHR Unmodified 1523.6827 0.68271197 770 Q5U0C2;Q53HK8;A0A024RDQ8;P40938 RFC3 Replication factor C subunit 3 yes no 0 0 0 5 0 1 48.686 48.763 3 1.5138E-15 13206 20230619_1885_Aki_TMTPro18x_K_F5 164.53 141.41 46679 58429 43183 47592 45405 62694 45401 46598 62869 52544 53630 52207 55186 48345 54621 53690 64116 56329 43279 53355 44229 49191 47129 61907 46320 48870 62669 52819 55520 52885 56272 50281 56066 54024 61200 53502 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130470000 9820 770 9287 18748 15020 15020 1 9606 Homo sapiens -0.05818208090454391 GEVAYIDGQVLVPPGYGQDVR Unmodified 2231.1222 0.12224699 2980 F8VPD4;P27708;Q53SY7;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 5 0 1 61.264 61.314 3 0.06718 18493 20230619_1885_Aki_TMTPro18x_K_F5 37.856 15.203 303350 269520 298810 315460 290870 385330 335280 312240 429920 286170 247990 285680 315360 271110 291440 306910 256220 332800 280620 247080 303990 315700 304610 382530 338250 323430 425070 291010 266250 289450 318640 282080 294950 309260 246020 315540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 421080000 9821 2980 9288 18749 15021 15021 1 9606 Homo sapiens 0.05593075218666854 GEVFNELVGK Unmodified 1090.5659 0.56587452 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348;A0A7I2V5T3;A0A7I2V5Z8 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 0 6.5 0.5 2 2 58.402 58.461 2;3 3.259E-05 17177 20230619_1887_Aki_TMTPro18x_K_F7 171.85 111.26 112990 85615 108670 123940 98702 129980 130760 121880 147880 149360 150190 164470 163460 138940 129940 171000 159490 201780 104400 78710 110730 122030 104350 130700 130500 125850 149790 149940 154630 165370 164830 145910 134590 172910 152600 191170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 313410000 9822 1647 9289 18750;18751;18752;18753 15022;15023 15023 2 9606 Homo sapiens 0.02421421752092101 GEVGLLFTNR Unmodified 1104.5928 0.59275797 620 Q9UKD2;A0A024RAE1 MRTO4;C1orf33 mRNA turnover protein 4 homolog yes no 0 0 0 4.5 3.5 1 1 54.918 54.951 2 9.7376E-08 15669 20230619_1888_Aki_TMTPro18x_K_F8 192.92 128.11 495000 357040 408430 475980 364440 500740 435530 452830 560330 480930 414730 402910 455620 401370 439910 536300 484800 477380 456710 328000 421940 471070 385150 503040 438900 466660 557920 482440 434120 412710 463210 421150 450620 533180 463370 454070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 248350000 9823 620 9290 18754;18755 15024;15025 15025 2 9606 Homo sapiens 0.04464530363270569 GEVITTYCPANNEPIAR Unmodified 1903.9098 0.90981137 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GW82;A0A1B0GUA1;A0A0J9YWF7;H0YHM6;F8WDY6;F8VVF2 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 4.67 0.471 1 2 48.662 48.725 2;3 1.0597E-23 13392 20230619_1883_Aki_TMTPro18x_K_F4 262.07 237.73 53877 42542 50101 55359 49432 55917 56424 55240 59600 66451 69803 72984 67145 57180 66804 69609 69722 74734 49779 39058 51232 54855 51600 56482 56600 56793 60972 66730 71053 73240 68592 60165 68116 70032 66716 70910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 580850000 9824 1415 9291 18756;18757;18758 15026;15027 15026 2 9606 Homo sapiens -0.005987143929587546 GEVLDPTAANR Unmodified 1141.5728 0.57275081 36 B4DJP2;B4E381;H3BR29;H3BSM7;A0A024QZE6;Q96GQ5 C16orf58 RUS1 family protein C16orf58 yes no 0 0 0 3 0 1 41.143 41.202 2 0.00024236 10128 20230619_1882_Aki_TMTPro18x_K_F3 125.57 111.05 37673 30125 36281 40927 43704 44848 47544 45207 53623 44583 51313 56173 49161 46073 50739 44234 58998 57093 34819 27670 37113 40486 44888 45061 47889 46155 54156 45455 52705 56128 50356 47754 51984 45227 56355 54098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14214000 9825 36 9292 18759 15028 15028 1 9606 Homo sapiens 0.0076273463266716135 GEVLGDVLQLETLK Unmodified 1512.8399 0.83992412 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 6 0 1 63.99 64.036 3 3.8372E-07 19930 20230619_1886_Aki_TMTPro18x_K_F6 138.02 120.8 455580 344740 273780 358810 374550 441430 448420 442430 468070 486480 482430 524610 486450 454490 384740 526570 494240 529610 419680 315890 295370 362370 383690 440180 448250 453000 476460 490370 494670 528310 491870 474730 399870 527780 472070 502860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 542380000 9826 349;3906 9293 18760 15029 15029 1 9606 Homo sapiens 0.10401775000696034 GEVPCTVTSASPLEEATLSELK Unmodified 2317.1359 0.13590772 3597 P48047;Q53HH2;H7C068 ATP5O ATP synthase subunit O, mitochondrial yes no 0 0 0 4 0.816 1 1 1 62.299 62.326 3 0.0031145 19378 20230619_1883_Aki_TMTPro18x_K_F4 66.536 56.614 8815.3 8309.9 8266.3 9909.1 8570.5 9540.2 9573 8195.6 10979 13258 9793.3 12612 12614 11649 11311 13204 9623 14950 8154.8 7617.8 8457.7 9868.8 8908.1 9647.6 9634.2 8607.2 11079 13107 10248 12783 12727 12131 11444 13336 9260.4 14161 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 635710000 9827 3597 9294 18761;18762;18763 15030 15030 1 9606 Homo sapiens 0.030025201449461747 GEVRPELGSR Unmodified 1098.5782 0.57817054 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 1 4 0.816 1 1 1 32.368 32.441 3 6.8331E-05 6464 20230619_1883_Aki_TMTPro18x_K_F4 138.99 100.24 203270 161810 194210 197390 278530 282410 245920 244530 316810 281950 317370 318870 329970 287330 278140 363960 362770 318260 187860 148450 199310 197530 281690 278320 251980 253350 318710 284210 326090 321120 334040 301330 288880 361720 345970 302940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 549150000 9828 2980 9295 18764;18765;18766 15031;15032;15033 15032 3 9606 Homo sapiens 0.03282458215130646 GEVTYTTSQVSK Unmodified 1298.6354 0.63541065 499 Q5T9B9;A8K2X4;A0A024R878;P17813-2;P17813 ENG Endoglin yes no 0 0 0 6 0 1 42.895 42.988 2 1.7853E-23 10780 20230619_1886_Aki_TMTPro18x_K_F6 243.13 196.97 5284.5 5486.3 5078.8 7590.3 17178 23925 31273 33556 70743 14305 25063 50345 17705 28314 37205 17812 34810 53261 4893.1 5035.6 5406.1 7710.9 17377 23139 31836 33077 67767 16679 27734 48629 19348 29341 37254 20110 33457 50144 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36626000 9829 499 9296 18767 15034 15034 1 9606 Homo sapiens -0.0019616408983438305 GEYNVYSTFQSHEPEFDYLK Unmodified 2452.0859 0.085921059 1204 A0A140VJT0;P63151;P63151-2;Q56VW8;Q00005-7;E5RIY1;Q00005-4;Q00005-5;Q66LE6;Q00005-3;Q00005;Q00005-2;Q00005-6;H0YB06 PPP2R2A;PPP2R2B;PPP2R2D Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform yes no 0 0 0 6 0.816 1 1 1 61.011 61.061 3;4 1.9183E-29 18344 20230619_1885_Aki_TMTPro18x_K_F5 197.72 182.95 77436 69181 76466 81187 66793 78409 74487 79945 78980 104120 99176 97848 104760 87794 96886 112900 105090 119410 71636 63421 77639 80988 70386 79544 74865 82201 81138 103680 101050 99284 106360 92254 99206 113360 100560 113300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 258800000 9830 1204 9297 18768;18769;18770 15035;15036 15035 2 9606 Homo sapiens -0.08203846468677511 GEYQESLR Unmodified 980.45632 0.45632407 2830 D3DVC4;P48681 NES Nestin yes no 0 0 0 2 0 1 35.866 35.922 2 0.0015262 8062 20230619_1881_Aki_TMTPro18x_K_F2 141.23 65.376 41984 27188 34887 37413 41862 56522 55413 57863 102860 87666 69952 96800 132990 93247 53848 142290 139010 155880 38716 24998 36179 37189 43486 55695 56485 59768 100840 87344 76140 97736 129950 99018 61336 142640 132300 147850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71553000 9831 2830 9298 18771 15037 15037 1 9606 Homo sapiens -0.034685838672317004 GEYQGVFHCAVETAK Unmodified 1694.7723 0.77225526 2530;1065 B4DLN1;B4E1E9;A0A0S2Z382;A0A0S2Z3G3;Q9UBX3;Q9UBX3-2 SLC25A10 Mitochondrial dicarboxylate carrier no no 0 0 0 6.5 0.5 1 1 48.878 48.96 3 0.062165 13506 20230619_1886_Aki_TMTPro18x_K_F6 41.422 21.584 39430 30468 31250 42357 36680 40639 37317 41107 50000 42524 43194 42919 46288 41801 38255 53294 53465 54048 36385 27995 32572 41752 37733 41226 37982 42000 49936 42932 44759 43541 46801 43756 39965 53364 51012 51325 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208040000 9832 2530;1065 9299 18772;18773 15038 15038 1 9606 Homo sapiens -0.0473399820175473 GEYRDYDR Unmodified 1072.4574 0.4573867 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog yes no 0 0 1 1.5 0.5 1 1 29.729 29.764 3 0.00089405 5625 20230619_1881_Aki_TMTPro18x_K_F2 128.38 66.733 75702 59044 74594 89505 115090 84716 93545 110130 100070 90057 105530 93440 99603 83460 94244 70485 128860 94800 69971 54306 76512 87803 115420 86682 95810 110170 101790 92159 107680 94375 101610 85785 97683 72492 122720 89908 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57640000 9833 4464 9300 18774;18775 15039;15040 15040 2 9606 Homo sapiens -0.07594369498337983 GEYTMEYSR Oxidation (M) 1150.4601 0.46008882 2867;2868 E5KND5;Q96RP9;Q96RP9-2;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 1 0 2 0 1 35.586 35.642 2 0.012625 7933 20230619_1881_Aki_TMTPro18x_K_F2 73.248 62.027 45971 28958 36131 41339 43704 55431 48025 48010 71416 55786 66595 73095 76180 67240 50688 78530 90927 92227 42372 26640 37680 40891 45039 54777 48873 49764 71179 56542 68973 73236 76300 70150 54363 79409 86619 87448 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47763000 9834 2867;2868 9301 18776 15041 15041 1704 1 9606 Homo sapiens -0.10912282155686626 GEYWECK Unmodified 970.38547 0.38546731 3486 P22059;B4DR25 OSBP Oxysterol-binding protein 1;Oxysterol-binding protein yes no 0 0 0 4 0 1 46.645 46.688 2 0.0072494 12472 20230619_1883_Aki_TMTPro18x_K_F4 126.67 110.46 76971 64103 67087 80321 75076 83503 75916 76068 93417 93266 103070 107140 103670 82425 94985 99262 117640 109950 71105 58818 69168 79803 77430 84031 77051 78705 94569 93754 105340 107270 105350 86764 98007 100070 112290 104350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38866000 9835 3486 9302 18777 15042 15042 1 9606 Homo sapiens -0.1009100017640776 GFADSERK Unmodified 908.43519 0.4351947 4057 Q5T0N5-3;Q5T0N5-4;Q5T0N5-2;Q5T0N5-5;Q5T0N5;B4DSW1;B4DSI7;A0A075B6Q2 FNBP1L Formin-binding protein 1-like yes no 0 0 1 5 0 1 34.63 34.717 3 0.029755 7424 20230619_1885_Aki_TMTPro18x_K_F5 65.246 20.851 44707 22917 49751 45568 64086 56628 57182 69259 55177 49794 78538 78075 66207 59340 53676 31789 91954 70882 41281 21202 50293 44294 65103 56698 58052 69318 57196 52188 78917 77293 67409 60399 56775 34660 87465 66987 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23432000 9836 4057 9303 18778 15043 15043 1 9606 Homo sapiens -0.022685491760853438 GFAFVEFSHLQDATR Unmodified 1723.8318 0.83181904 1108 A0A0S2Z4W4;Q7Z3D7;P98175-2;P98175;P98175-5;A0A0S2Z4X1;P98175-4;P98175-3;Q6PKH5 DKFZp686E2459;RBM10 RNA-binding protein 10 yes no 0 0 0 8 0 1 59.63 59.667 3 8.686E-11 17662 20230619_1888_Aki_TMTPro18x_K_F8 159.22 141.08 49600 35226 47989 47728 35935 55517 42200 44045 66425 52785 52601 66986 78940 74099 50461 92716 80773 111790 45813 32369 48712 47262 38629 55236 42951 46032 65732 53380 55833 67629 78470 77182 53730 93788 77205 105860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39560000 9837 1108 9304 18779 15044 15044 1 9606 Homo sapiens -0.0011435919604991795 GFAFVQYVNER Unmodified 1328.6513 0.65133548 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;P07910-4;G3V5X6;G3V3K6;G3V251;G3V575;G3V555;B4DSU6;B4DMJ1;G3V4M8 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 0 3.5 2.87 2 2 1 1 58.347 58.368 2;3 1.6851E-14 17927 20230619_1881_Aki_TMTPro18x_K_F2 188.28 174.47 578990 469770 555770 554200 528070 623070 630820 622020 726040 538120 461180 439330 500400 446190 610360 569410 525530 475500 535170 430820 566160 553840 553900 624720 632900 633230 723330 545740 487580 450990 514910 466410 613790 565160 503300 452810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4169299999.9999995 9838 2226 9305 18780;18781;18782;18783;18784;18785 15045;15046;15047 15046 3 9606 Homo sapiens 0.00015586937752232188 GFAFVTFDDHDTVDK Unmodified 1712.7682 0.76821573 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;P51991-2;B4DDB6;B4E3E6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 5.25 1.48 1 1 1 1 58.987 59.036 3 2.1228000000000003E-25 17728 20230619_1886_Aki_TMTPro18x_K_F6 230.97 204.85 485510 419210 490220 531700 464070 607820 522970 527220 503840 540880 465370 518930 526390 405680 553360 526820 493730 561540 449130 384640 497560 528610 486270 606720 523470 544560 513340 545080 482570 523690 536230 428910 558800 529470 473440 532740 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 688370000 9839 1469;2450 9306 18786;18787;18788;18789 15048;15049;15050 15050 3 9606 Homo sapiens -0.05965764423831388 GFAFVTFESPADAK Unmodified 1485.714 0.71399532 3564;3963 P38159;H3BT71;B4E352;H0Y6E7;H3BR27;P38159-3;A8K8A6;O75526;Q8N7X1;Q96E39;Q2VIN3;A0A1B0GUK8 RBMX;RBMXL2;RBMXL3;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X-linked-like-3;RNA binding motif protein, X-linked-like-1 no no 0 0 0 7 0.816 1 1 1 62.436 62.473 3 1.3878E-22 18830 20230619_1888_Aki_TMTPro18x_K_F8 186.76 121.94 2247700 1838000 2149200 2181500 2040900 2416200 2264500 2324400 2634600 2572400 2386100 2497900 2828600 2394700 2423100 2774800 2674800 2906300 2077600 1685700 2190100 2178500 2136400 2423200 2282400 2387300 2654400 2584600 2479900 2535500 2853700 2494200 2487000 2788700 2558400 2758100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4363800000 9840 3564;3963 9307 18790;18791;18792 15051;15052 15052 2 9606 Homo sapiens -0.009433117847038375 GFAFVYFENVDDAK Unmodified 1620.746 0.74602373 2322 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995-3;P62995;H7BXF3 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta yes no 0 0 0 6 1.41 1 1 1 1 1 63.691 63.722 3 1.3378E-11 19507 20230619_1887_Aki_TMTPro18x_K_F7 171.26 158.12 217560 127390 236300 201490 160110 231250 202950 145190 383380 187440 136720 260500 280600 363910 364470 213400 245140 400820 200960 117380 237170 197700 174240 229400 207480 155700 370080 190200 159280 264080 286660 363740 361740 227890 236780 378140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 508800000 9841 2322 9308 18793;18794;18795;18796;18797 15053;15054 15054 2 9606 Homo sapiens -0.039519441015954726 GFALVGVGSEASSKK Unmodified 1435.7671 0.76709352 3000 F8WJN3;Q16630-3;Q16630;Q16630-2;A0A2P1M905;A0A2P1M8Z1 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes no 0 0 1 3 0 1 51.211 51.282 3 0.00039263 14703 20230619_1882_Aki_TMTPro18x_K_F3 72.321 59.554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9842 3000 9309 18798 15055 15055 1 9606 Homo sapiens 0.06664065997938451 GFAPADVFVQWLQR Unmodified 1632.8413 0.84126152 2793 CON__Q1RMK2 yes yes 0 0 0 5 0 1 65.794 65.837 3 0.0013215 20519 20230619_1885_Aki_TMTPro18x_K_F5 75.462 57.662 + 16920 13529 15190 15864 15576 21420 19590 15426 21489 17402 16577 19148 15847 16752 22386 15582 19688 24350 15630 12407 15593 15899 16293 21092 19563 16238 21577 17551 17241 19259 16530 17297 22463 16189 18896 23018 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15701000 9843 2793 9310 18799 15056 15056 1 0.05015453880128007 GFAYIEFSDK Unmodified 1175.5499 0.5498901 4183 Q86U42-2;Q86U42;Q92843-2;A0A7I2V383;B4DEH8;G3V4T2;H0YJH9 PABPN1 Polyadenylate-binding protein 2 yes no 0 0 0 6.5 0.5 1 1 60.322 60.372 3 0.00013486 18268 20230619_1886_Aki_TMTPro18x_K_F6 123.63 94.152 159480 128980 141420 154940 130030 160080 165500 153610 167660 167700 158420 176750 183430 170950 186330 198040 173030 199090 147320 118310 145100 154420 137060 161310 164870 157820 170380 169020 164260 178810 186640 177900 188760 198620 165860 188990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220950000 9844 4183 9311 18800;18801 15057;15058 15057 2 9606 Homo sapiens -0.03086284484834323 GFAYVQFEDVR Unmodified 1329.6354 0.63535107 1114 Q5JRI1;Q53GD7;A0A0S2Z504;O75494-5;O75494-4;O75494-6;O75494-3;O75494-2;O75494;Q8WXF0 SRSF10;SRSF12 Serine/arginine-rich splicing factor 10;Serine/arginine-rich splicing factor 12 yes no 0 0 0 5.5 0.5 1 1 57.627 57.691 2 1.0068E-05 17147 20230619_1886_Aki_TMTPro18x_K_F6 178.55 147.13 206130 154850 192200 233540 177580 245580 212640 216120 257520 235410 218750 260420 262380 244220 243820 271060 218790 285580 190400 142440 196490 229360 187040 246520 213770 223400 258300 237730 228490 262570 265640 253780 247050 272710 210040 270840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 349500000 9845 1114 9312 18802;18803 15059;15060 15060 2 9606 Homo sapiens -0.01628119299152786 GFAYVQFEDVRDAEDALHNLDRK Unmodified 2707.299 0.29904215 1114 Q5JRI1;Q53GD7;A0A0S2Z504;O75494-5;O75494-4;O75494-6;O75494-3;O75494-2;O75494 SRSF10 Serine/arginine-rich splicing factor 10 yes no 0 0 2 6 0 1 61.4 61.455 5 8.6854E-13 18731 20230619_1886_Aki_TMTPro18x_K_F6 122.34 105.19 123410 108500 126690 128670 107780 110250 117080 112930 114320 174410 154960 171960 192610 162930 162940 219130 183480 209500 114190 99483 128120 128090 113590 113020 117530 116870 118570 172790 158850 174370 193970 171340 167670 218580 175530 199000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 337550000 9846 1114 9313 18804 15061 15061 1 9606 Homo sapiens 0.013684593109701382 GFCFITFK Unmodified 1018.4946 0.49462383 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;B4E0W4 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 5.5 0.5 1 1 62.649 62.699 2 0.00070929 19141 20230619_1885_Aki_TMTPro18x_K_F5 170.32 109.36 1741300 1176700 1401500 1736100 1282300 1866500 1702000 1640300 2417200 1754600 1512000 1792200 2004900 1851600 1642900 2653500 1729100 2900100 1605800 1082600 1452800 1707700 1358400 1870500 1712800 1695000 2384600 1770500 1617100 1820800 2015000 1950400 1687900 2663700 1661600 2747600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1152000000 9847 759 9314 18805;18806 15062;15063 15062 2 9606 Homo sapiens -0.013883694862670382 GFCFITFKEEEPVK Unmodified 1729.8385 0.83854391 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;B4E0W4 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 1 7.5 0.5 1 1 60.836 60.874 3;4 9.2982E-17 18148 20230619_1887_Aki_TMTPro18x_K_F7 215.51 195.75 956520 749390 907450 952000 716680 925340 901070 903340 995300 1080800 949060 1035000 1016200 946190 1027800 1217600 979430 1073600 883860 687870 923410 944460 765690 936920 901160 929280 1007500 1081200 979710 1049600 1036100 992750 1043400 1210700 938230 1020900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1771199999.9999998 9848 759 9315 18807;18808 15064;15065 15064 2 9606 Homo sapiens 0.0028181764030250633 GFCFITFKEEEPVKK Unmodified 1857.9335 0.93350692 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;B4E0W4 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 2 2 0 1 56.899 56.915 5 1.755E-07 17359 20230619_1881_Aki_TMTPro18x_K_F2 132.31 115.8 174720 156880 176240 178480 154880 167920 187880 174970 160010 200110 183380 154680 171560 125580 210270 150150 125350 107360 161670 143770 178600 178420 163310 170830 186730 178970 165720 199370 186460 158080 177030 131870 208120 148330 120630 102490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 337570000 9849 759 9316 18809 15066 15066 1 9606 Homo sapiens 0.03885751111488389 GFCFITYTDEEPVK Unmodified 1704.7705 0.77052392 756;3227 A0A087WUK2;A0A024RDB5;O14979;B4DTA2;B4DGN3;O14979-2;O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 6 0 1 61.855 61.91 2 0.0010324 18975 20230619_1886_Aki_TMTPro18x_K_F6 116.3 110.06 12059 10464 14811 17822 9945.7 14296 17094 15478 17600 20315 17773 18906 18965 19198 13566 21123 20599 23195 11176 9635.1 14769 17335 10921 14734 16836 15872 17921 20226 18281 19259 19090 19888 14321 21289 19659 22000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20931000 9850 756;3227 9317 18810 15067 15067 1 9606 Homo sapiens -0.05367052010365114 GFCFITYTDEEPVKK Unmodified 1832.8655 0.86548694 756;3227 A0A087WUK2;A0A024RDB5;O14979;B4DTA2;B4DGN3;O14979-2;O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 1 8 0 1 57.938 57.985 3 2.1991E-05 16996 20230619_1888_Aki_TMTPro18x_K_F8 105.99 98.715 76827 56713 76593 83374 59274 73188 83184 83690 77099 97663 86766 88410 96344 70422 90089 91286 83854 86312 70995 52154 77620 81859 63605 74978 82339 85155 79381 97595 89018 89528 97628 74396 91381 91124 80308 82023 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42114000 9851 756;3227 9318 18811 15068 15068 1 9606 Homo sapiens -0.017631185392019688 GFCFLEYEDHK Unmodified 1443.6129 0.61290107 2265;1680;3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PEX7;B4DMD1;A0A6Q8PHG0;A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2V5Q6;A0A7I2YQV8;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 HNRNPR;HNRPR;DKFZp686A13234;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 5.5 1.71 1 1 1 1 1 1 55.448 55.5 3 5.1967E-09 16027 20230619_1885_Aki_TMTPro18x_K_F5 174.4 149.84 3559800 2959100 3190700 3463400 2965200 3365000 3548500 3380100 3297300 4105900 3861400 3862700 4625000 3958500 3681700 5436900 3732800 4806100 3289200 2713300 3270400 3455700 3113800 3411200 3537400 3472300 3400700 4102100 3968500 3938500 4650900 4157700 3773500 5399000 3578500 4567600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 7057899999.999999 9852 3254;1680;2265 9319 18812;18813;18814;18815;18816;18817 15069;15070;15071;15072 15070 4 9606 Homo sapiens -0.09116086759081554 GFCLPPHCSR Unmodified 1229.5434 0.54338171 3441 V9HWH2;P12277;A0A0S2Z471;G3V4N7;G3V461 HEL-S-29;CKB Creatine kinase B-type yes no 0 0 0 5.67 0.471 1 2 38.823 38.91 3 0.043151 9046 20230619_1886_Aki_TMTPro18x_K_F6 48.004 41.563 155750 125810 170480 170960 188860 194260 181700 187240 241950 200950 227520 225170 224590 192720 209480 219070 269890 253190 144120 115550 172210 169240 194470 194520 185520 192120 242370 203180 233950 226420 228680 201300 216650 221600 257530 240190 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 64837000 9853 3441 9320 18818;18819;18820 15073;15074;15075 15074 3 9606 Homo sapiens -0.0622082418883565 GFCYVEFDEVDSLK Unmodified 1706.7498 0.74978848 3913;3914 Q15056;A0A7I2V4E4;Q75MU1;B4DMV6;Q75MU2;Q15056-2;A0A7I2V385;A4D198 EIF4H;WBSCR1;LOC392647 Eukaryotic translation initiation factor 4H no no 0 0 0 4.5 1.12 1 1 1 1 62.783 62.811 3 3.8005E-17 19507 20230619_1883_Aki_TMTPro18x_K_F4 215.53 199.41 155370 117270 141370 152390 122300 144370 143220 135920 157810 165480 149760 166290 199160 174000 173350 205110 180310 199010 143490 107680 144550 150900 129220 146390 143680 140300 159770 165720 156330 169040 200510 180860 177290 205190 172580 189010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 851760000 9854 3913;3914 9321 18821;18822;18823;18824 15076;15077;15078 15077 3 9606 Homo sapiens -0.0753164239004036 GFDEYMK Oxidation (M) 904.36367 0.36366924 2888 E7DVW5;Q01469 FABP5 Fatty acid-binding protein, epidermal yes no 0 1 0 3.5 0.5 1 1 45.25 45.31 2 0.051712 11811 20230619_1883_Aki_TMTPro18x_K_F4 78.149 66.787 803870 647760 721110 855500 882260 800640 887000 852850 912140 991250 1074300 952030 1176200 928790 889390 1287800 1148100 1038700 742610 594760 742450 846020 902460 815420 894900 871580 934840 993040 1097900 968650 1183200 977810 925900 1273300 1095200 989620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 919140000 9855 2888 9322 18825;18826 15079;15080 15080 1713 2 9606 Homo sapiens -0.09233804924963351 GFDEYMK Unmodified 888.36875 0.36875462 2888 E7DVW5;Q01469 FABP5 Fatty acid-binding protein, epidermal yes no 0 0 0 5 0.816 1 1 1 50.876 50.937 2 0.011512 14379 20230619_1883_Aki_TMTPro18x_K_F4 116.54 95.145 1781600 1437300 1660400 1806500 1639900 1823000 1913300 1876200 1989500 2465600 2339500 2202000 2764300 2198300 1975700 2921700 1895500 2392400 1646300 1319000 1697500 1794400 1712500 1843500 1916100 1928700 2039300 2451500 2400700 2248600 2768500 2306200 2024000 2892100 1817800 2276100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2562200000 9856 2888 9322 18827;18828;18829 15081;15082 15081 2 9606 Homo sapiens -0.0798950106235452 GFDILGIKPVQR Unmodified 1341.7769 0.77687035 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 1 4.5 0.5 1 1 57.471 57.502 3 1.3831E-07 16842 20230619_1885_Aki_TMTPro18x_K_F5 138.63 112.24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9857 3650 9323 18830;18831 15083;15084 15084 2 9606 Homo sapiens 0.11965298793984402 GFDPTASPFCQ Unmodified 1225.5074 0.50737336 3190 M0QY97;Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 0 0 0 5 0 1 61.398 61.448 2 0.0092866 18543 20230619_1885_Aki_TMTPro18x_K_F5 75.043 67.103 38945 37404 38149 43344 37465 43509 41145 39441 49751 41798 38892 39190 43072 41352 44504 44669 45518 49060 36044 34277 38842 43287 39098 43897 41535 40653 49756 42068 40612 39980 43934 42752 45286 45083 43566 46538 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42050000 9858 3190 9324 18832 15085 15085 1 9606 Homo sapiens -0.09636002884690242 GFDQDMANK Oxidation (M) 1040.4233 0.42330938 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 1 0 3 0 1 39.837 39.893 2 0.0086726 9514 20230619_1882_Aki_TMTPro18x_K_F3 82.645 49.804 48938 30640 41026 48394 66602 69642 50635 59876 75183 65784 74733 70419 75310 62956 59583 76788 85269 78487 45124 28223 42753 47649 66768 68566 52747 61953 75175 66340 76660 71062 76115 65926 62374 76986 81289 74554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43746000 9859 682 9325 18833 15086 15086 417 1 9606 Homo sapiens -0.09528533981620058 GFDQDMANK Unmodified 1024.4284 0.42839476 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 0 4 0 1 45.347 45.391 2 0.061944 11915 20230619_1883_Aki_TMTPro18x_K_F4 76.17 56.383 188090 148980 176140 179480 184300 205960 184610 195570 253910 250950 276260 269370 279200 253020 207330 297330 314240 298550 173790 136670 180050 179130 190980 206040 188340 201940 255640 251270 282340 272150 281650 263800 218480 297880 299520 283610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102900000 9860 682 9325 18834 15087 15087 1 9606 Homo sapiens -0.08284230118988489 GFDQTINLILDESHER Unmodified 1885.917 0.91700524 1929 F2Z2Y6;C9JNV3;A4D0W0;O95777;C9JIZ0 LSM8 U6 snRNA-associated Sm-like protein LSm8 yes no 0 0 0 4 0 1 62.449 62.453 3 2.2912E-08 19379 20230619_1883_Aki_TMTPro18x_K_F4 135.55 121.28 23326 19068 22454 23822 22213 28179 25407 24726 31986 26467 29220 26799 27617 25270 28816 34279 32827 34488 21562 17496 22892 23722 23218 28075 25634 25547 32080 26683 30027 27168 28314 26587 29534 34295 31381 32749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21099000 9861 1929 9326 18835 15088 15088 1 9606 Homo sapiens 0.009483414791247924 GFDTSSSSSNSAASSSFK Unmodified 1752.7439 0.74385148 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 7 0 1 46.465 46.553 3 1.0619E-18 12017 20230619_1887_Aki_TMTPro18x_K_F7 138.91 129.72 35764 32586 39158 43023 38905 45806 41949 43051 50717 48865 49860 44778 44634 42347 45128 49404 52212 49616 33119 29907 39519 42618 40536 46033 42402 44324 51134 48959 50936 45578 45781 44122 46294 49536 49870 47133 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202340000 9862 68 9327 18836 15089 15089 1 9606 Homo sapiens -0.10241069367975797 GFDTTAINK Unmodified 965.48181 0.48181054 785 Q14155-5;A0A8V8TQ72;Q14155-1;A0A2R8YG42;B7Z6G2;B1ALK7;A0A024RDY9;Q14155;Q14155-3;A0A2X0SF98;Q14155-2;Q14155-6;Q5W9H1;Q5ZEZ3;E7EUY6;E7EU80 ARHGEF7;KIAA0142 Rho guanine nucleotide exchange factor 7 yes no 0 0 0 7 0 1 47.63 47.718 2 3.3712E-11 12531 20230619_1887_Aki_TMTPro18x_K_F7 178.83 124.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9863 785 9328 18837 15090 15090 1 9606 Homo sapiens -0.002311093448156498 GFDVFNALDLMENK Unmodified 1611.7603 0.76029359 1670 P30419;A0A7I2V539;Q96HI4;P30419-2;B4DHU9;B2RCF3;Q5VUC6;B3KT39;B4DXS1;Q5VUC7;O60551 NMT1;NMT2 Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase;Glycylpeptide N-tetradecanoyltransferase 2 yes no 0 0 0 7 0.816 1 1 1 65.721 65.743 3 4.415E-22 20373 20230619_1887_Aki_TMTPro18x_K_F7 221.86 203.73 73529 64850 81066 78767 60671 72614 82646 76092 77714 93242 94724 96248 99099 86281 99246 110660 100100 115110 68081 59473 81413 78352 65213 73975 81944 77991 80187 93368 96617 97255 101010 90621 101030 111020 95868 109230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 949810000 9864 1670 9329 18838;18839;18840 15091;15092;15093 15092 3 9606 Homo sapiens -0.021116149449653676 GFEDGIVQLK Unmodified 1104.5815 0.58152458 2742 C9J8Q1;F8W9P7;H7C537;Q9UMS0-2;Q9UMS0-3;Q9UMS0 NFU1 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial yes no 0 0 0 5.5 0.5 1 1 57.727 57.791 3 0.034127 17013 20230619_1885_Aki_TMTPro18x_K_F5 53.124 17.71 17633 16251 17383 14659 15097 16423 21884 19107 17251 19702 21744 15789 22707 18794 18944 21918 20075 18048 16316 14864 17633 14984 16024 16548 21529 19350 18020 19756 22101 16339 22958 19454 19408 21753 19183 17191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59187000 9865 2742 9330 18841;18842 15094 15094 1 9606 Homo sapiens 0.03341708269135779 GFEELPLCSCR Unmodified 1366.601 0.60095617 726 A0A0G2JIS2;A0A1U9X7P8;A0A024RCN9;Q96KQ7-2;Q96KQ7;A0A0G2JRR0;A0A0G2JRN8;Q59FM7;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes no 0 0 0 5 0 1 53.469 53.541 2 0.023142 15275 20230619_1885_Aki_TMTPro18x_K_F5 70.908 63.263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9866 726 9331 18843 15095 15095 1 9606 Homo sapiens -0.0676802677392061 GFEEVIK Unmodified 820.43307 0.43306943 2627 B4DZ87;O94826;B3KQK0;B3KQK5 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 0 4 0.816 1 1 1 51.347 51.405 2 0.014775 14632 20230619_1883_Aki_TMTPro18x_K_F4 117.17 33.326 583120 523120 529100 680280 601200 729670 719600 727440 825950 695130 774700 864220 797830 686240 734310 820670 842440 950550 539110 480060 544160 674480 622650 733760 721810 742570 832860 709500 798900 863520 810700 720910 754290 829520 805750 901070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 665680000 9867 2627 9332 18844;18845;18846 15096 15096 1 9606 Homo sapiens 0.015670220860897643 GFEEVIKK Unmodified 948.52803 0.52803245 2627 B4DZ87;O94826;B3KQK0;B3KQK5 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 1 8 0 1 48.705 48.771 3 0.0612 12998 20230619_1888_Aki_TMTPro18x_K_F8 47.657 19.489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9868 2627 9333 18847 15097 15097 1 9606 Homo sapiens 0.05170955557275647 GFELTFK Unmodified 840.43815 0.43815481 619 A0A0C4DGS1;A0A024RAD5;P39656;P39656-3;U3KQ84 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 0 4.5 3.5 1 1 58.99 59.01 2 0.0049299 18063 20230619_1880_Aki_TMTPro18x_K_F1 144.83 70.498 458020 475240 588510 498910 634850 630190 757970 653200 555150 556010 674670 456360 437960 321950 949250 337830 317190 344040 425220 435020 587220 504140 657410 628160 750760 663170 581430 563790 675890 463700 477580 337730 918040 341630 309780 326610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 351410000 9869 619 9334 18848;18849 15098;15099 15098 2 9606 Homo sapiens 0.011553259487186551 GFESPSDNSSAMLLQWHEK Unmodified 2161.9739 0.97386819 3245 O15511;B1ALC0;O15511-2 ARPC5 Actin-related protein 2/3 complex subunit 5 yes no 0 0 0 7 0 1 57.333 57.389 4 0.012661 16728 20230619_1887_Aki_TMTPro18x_K_F7 60.826 48.68 48086 42512 49395 57243 45257 63279 58030 54553 59737 72083 65932 67329 81059 61529 66695 79732 75338 84536 44497 39028 50076 56651 47769 63288 57828 56814 61085 71753 68024 68369 81518 64677 68624 80054 72063 80208 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6842700 9870 3245 9335 18850 15100 15100 1 9606 Homo sapiens -0.06063979026657762 GFEVVYMTEPIDEYCVQQLK Unmodified 2447.1389 0.13888461 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 0 4.5 0.5 1 1 63.808 63.835 3 4.8175E-16 19936 20230619_1883_Aki_TMTPro18x_K_F4 151.48 28.122 271580 342200 411040 323120 202180 294090 387830 270120 232980 317000 268320 237920 335650 239850 444930 346780 259860 341370 253040 312800 402430 327970 231210 299160 375590 279300 247900 315310 276850 245380 345080 253320 439790 346740 250990 324000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 393230000 9871 751 9336 18851;18852 15101;15102;15103 15101 3 9606 Homo sapiens -0.02679928001953158 GFFDPNTHENLTYR Unmodified 1709.7798 0.77978347 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0 PLEC;PLEC1 Plectin yes no 0 0 0 6 0 1 49.183 49.261 3 3.2712E-09 13564 20230619_1886_Aki_TMTPro18x_K_F6 164.93 161.54 161150 136750 168760 182150 194870 228450 238680 243290 270830 262070 239270 249420 282020 237720 234360 293950 266220 264090 149100 125540 171350 180820 201610 227740 239030 247900 272920 263480 248900 253400 284230 248550 241240 292660 254400 251160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181860000 9872 3921 9337 18853 15104 15104 1 9606 Homo sapiens -0.04671522609805834 GFFEGTIASK Unmodified 1055.5288 0.52876073 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 4.25 3.27 2 1 1 55.934 55.964 2;3 0.00020127 16119 20230619_1888_Aki_TMTPro18x_K_F8 118.4 91.074 258780 202250 247190 273600 252260 286020 283030 285520 311640 312250 318320 298570 358230 287620 298570 369800 335850 351160 239130 185770 252320 270550 262540 288210 284530 292440 316220 313740 327870 303560 361410 301470 307110 369030 321080 333680 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 304110000 9873 3647 9338 18854;18855;18856;18857 15105;15106;15107 15107 3 9606 Homo sapiens 0.003217502063534994 GFFICDQPYEPVSPYSCK Unmodified 2192.9547 0.95471265 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 7.5 0.5 1 1 62.117 62.149 3 2.3337E-09 18702 20230619_1888_Aki_TMTPro18x_K_F8 122.46 107.07 182600 124470 160920 180310 125280 169570 174330 173790 337060 196470 184870 209050 267400 229860 190730 279640 253710 301920 168510 114480 164890 177300 134900 172250 177810 177910 327680 198140 200480 212440 266820 239090 199270 281160 242480 286350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 396970000 9874 3402 9339 18858;18859 15108 15108 1 9606 Homo sapiens -0.09404651641989403 GFFIKPTVFGGVQDDMR Oxidation (M) 1928.9455 0.94546859 1437 A0A384MTJ7;P30837;B4DLJ0 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes no 0 1 1 3 0 1 60.578 60.607 3 0.00029668 18675 20230619_1882_Aki_TMTPro18x_K_F3 86.479 78.935 80034 66864 82164 92409 97893 91101 91870 95587 98718 96783 112250 110950 98189 91637 111310 115480 109250 117250 74031 61415 83562 91186 100130 92352 93228 97385 100710 98158 113940 111390 101330 96377 112870 115750 104600 111320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110220000 9875 1437 9340 18860 15109 15109 922 1 9606 Homo sapiens 0.01815367854624128 GFGAFER Unmodified 782.37114 0.37113788 1692 A0A7P0TAR0;A0A7P0T868;Q9NY61;A0A7P0TBI0;A0A7P0Z4P2;A0A7P0Z4N2;A0A7P0Z434;A0A087WTH8;A0A087WWS8 AATF Protein AATF yes no 0 0 0 7 0 1 45.276 45.362 2 0.021787 11456 20230619_1887_Aki_TMTPro18x_K_F7 92.319 61.016 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9876 1692 9341 18861 15110 15110 1 9606 Homo sapiens -0.02875284542380996 GFGDFSSW Unmodified 901.36063 0.36063277 136 A0A7P0TAH4;A0A7P0Z4K4;A8K0I0;A0A024R1C1;A0A7P0TA15;Q13356 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes no 0 0 0 5.5 0.5 1 1 64.629 64.673 2 0.0091881 20204 20230619_1886_Aki_TMTPro18x_K_F6 95.957 91.94 8008.8 10002 9529.9 10787 9861.8 10774 10293 9916.8 11749 11816 12513 14191 14726 9430.8 13957 12451 14813 16030 7441.5 9153.1 9566.9 10831 10225 10882 10400 10246 11922 11909 12913 14129 14902 10064 14245 12666 14173 15183 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35418000 9877 136 9342 18862;18863 15111;15112 15112 2 9606 Homo sapiens -0.09399311987476722 GFGDGYNGYGGGPGGGNFGGSPGYGGGR Unmodified 2494.0323 0.03226278 3491 P22626;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V3P7;A0A024RA28 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 8 0 1 52.367 52.444 3 2.8301E-14 14622 20230619_1888_Aki_TMTPro18x_K_F8 137.26 130.9 64324 36983 48587 62669 56629 76368 63343 63878 59759 90244 68120 67394 71821 56738 64833 65645 54185 51022 59248 34112 50892 61286 58496 75823 63374 66799 61595 89038 69662 69014 72793 59368 65466 65023 51924 48628 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209800000 9878 3491 9343 18864 15113 15113 1 9606 Homo sapiens -0.1549920612792448 GFGDHIHWR Unmodified 1123.5312 0.53116077 3365 O95881;V9GY50;V9GYV4 TXNDC12 Thioredoxin domain-containing protein 12 yes no 0 0 0 8 0 1 39.749 39.738 3 1.4513E-06 9361 20230619_1888_Aki_TMTPro18x_K_F8 171.99 149.98 87998 73842 85085 83185 78393 96695 93001 92494 119930 102130 105800 107220 109490 98288 111390 104080 115430 124520 81360 67683 86577 83454 82477 96650 93758 95033 120040 102900 109400 108290 111760 102000 113420 105670 110460 118020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136770000 9879 3365 9344 18865 15114 15114 1 9606 Homo sapiens -0.025663565453669435 GFGFGLVK Unmodified 823.45922 0.4592246 62 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;P45880-2;P45880-1;Q5JSD2;Q5JSD1;A2A3S1 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 4.5 0.5 1 1 59.807 59.834 2;3 0.0075396 17827 20230619_1885_Aki_TMTPro18x_K_F5 122.15 88.076 391900 407740 416820 394340 536460 718600 537260 559650 762860 48221 43575 50053 54618 47890 215820 52754 59431 46837 363190 372980 423240 403780 549110 698060 548000 568770 733350 77706 79427 51110 63310 49710 207080 53136 58288 44595 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166790000 9880 62 9345 18866;18867 15115;15116 15116 2 9606 Homo sapiens 0.04043336048232504 GFGFILFK Unmodified 927.52182 0.52182486 4406 Q99729-3;D6R9P3;D6RD18;B4DMY3;D6RBZ0;Q53F64;Q99729-2;Q99729-4;Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 5.5 0.5 1 1 64.294 64.339 2 0.0010596 20059 20230619_1886_Aki_TMTPro18x_K_F6 149.92 89.771 3555800 2723000 2981000 2961600 2593000 3516700 3135000 3065900 4517400 2335600 1861500 1806300 2043600 1929700 3396900 2135000 1987300 2022300 3282200 2495900 3070700 2979800 2747900 3502600 3170600 3143900 4411500 2389000 2045500 1862400 2145500 1997000 3345600 2140200 1915300 1921800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1310000000 9881 4406 9346 18868;18869 15117;15118 15118 2 9606 Homo sapiens 0.05516482116433963 GFGFVCFSSPEEATK Unmodified 1661.7396 0.73955814 566;1667 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;A0A024R9E2;Q3ZCS4;Q9H361;Q5VX58;Q2VIP3;Q4VXU2;A0A6Q8JFT6;H0YB86;A0A6I8PLA1;A0A6I8PS38;Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;H0Y5F5;H0YEU6;Q59GZ7;Q53GL4;A0A7I2V4V6;Q3B867;Q147Y3 PABPC1;PABPC3;PABPC1L;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 4 no no 0 0 0 7 0.816 1 1 1 61.707 61.748 3 6.4683E-14 18557 20230619_1887_Aki_TMTPro18x_K_F7 172.57 161.3 1481800 1208000 1458100 1470000 1148800 1343900 1407800 1456800 1482100 1795500 1622500 1499500 1876300 1529100 1439400 2211600 1753900 1780500 1370000 1108200 1478600 1461800 1225200 1371200 1407800 1489500 1513200 1786800 1668000 1538100 1885900 1612400 1493100 2184900 1675200 1695600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2902100000 9882 566;1667 9347 18870;18871;18872 15119;15120;15121 15120 3 9606 Homo sapiens -0.0648420532459113 GFGFVDFLTK Unmodified 1129.5808 0.5807963 4737 Q9Y4C8;A0A024RBL4;H0YIL2 RBM19 Probable RNA-binding protein 19 yes no 0 0 0 3 0 1 64.387 64.419 2 4.8134E-05 20320 20230619_1882_Aki_TMTPro18x_K_F3 164.57 81.302 18318 16492 20691 19091 16995 23257 17895 22256 22992 24501 20611 21662 26047 23857 23369 31553 21733 28513 16967 15116 20758 19130 18008 23169 18171 22846 23064 24557 21505 22207 26294 24936 23769 31388 20857 27089 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29078000 9883 4737 9348 18873 15122 15122 1 9606 Homo sapiens 0.02118913620074636 GFGFVDFNSEEDAK Unmodified 1560.6733 0.67325272 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;B3KTP9;A0A7I2V699;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 0 3.36 1.49 1 3 2 2 2 1 61.468 61.494 2;3 2.7253E-57 18926 20230619_1883_Aki_TMTPro18x_K_F4 329.85 293.51 1339600 1122500 1253600 1341000 1161500 1400800 1413300 1409100 1455700 1545200 1513700 1603100 1745700 1531000 1588100 1902300 1491800 1874600 1238200 1029500 1279900 1337400 1221400 1412000 1412100 1442700 1483800 1555900 1561300 1622700 1766900 1601100 1614300 1903200 1430900 1779400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 14620000000 9884 1658 9349 18874;18875;18876;18877;18878;18879;18880;18881;18882;18883;18884 15123;15124;15125;15126;15127;15128 15126 6 9606 Homo sapiens -0.08465697894985169 GFGFVLFK Unmodified 913.50617 0.5061748 759;3227;756 A0A087WUK2;A0A024RDB5;O14979;B4DTA2;O14979-2;O14979-3;Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;D6RAF8;D6RF44;D6RBQ9 HNRNPDL;HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D-like;Heterogeneous nuclear ribonucleoprotein D0 no no 0 0 0 5.33 0.471 2 1 63.706 63.752 2;3 0.00046431 19809 20230619_1886_Aki_TMTPro18x_K_F6 163.41 117.78 8086000 6641900 7152200 7466300 6915500 11076000 4481800 11559000 5735300 5304100 5075300 3930100 4908300 4254000 7504200 5484900 5026600 4619100 7470000 6088300 7341600 7522900 7170800 10925000 4723600 11581000 5749800 5647900 5228900 4074600 5136500 4442400 7437200 5450500 4830600 4398000 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 6849099999.999999 9885 756;3227;759 9350 18885;18886;18887 15129;15130;15131;15132 15131 4 9606 Homo sapiens 0.045961955993675474 GFGFVSFER Unmodified 1044.5029 0.50288033 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;A0A024R9E2;Q3ZCS4;Q9H361;Q5VX58;Q2VIP3;H0YAP2;A8K8J2 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 yes no 0 0 0 4.33 2.62 1 1 1 58.601 58.623 2 1.5581E-06 17211 20230619_1888_Aki_TMTPro18x_K_F8 163.04 132.4 392140 347720 343400 393680 309220 390510 375590 395790 430110 479960 395990 386750 488450 383770 388280 535900 255520 430670 362420 318670 352740 393830 326240 395240 376650 406150 434230 477650 411820 396900 490380 404100 390190 529760 246980 409520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1120300000 9886 566 9351 18888;18889;18890 15133;15134 15134 2 9606 Homo sapiens -0.01759099245282414 GFGFVSYEK Unmodified 1032.4916 0.49164694 1667 Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;H0Y5F5;H0YCC8 PABPC4 Polyadenylate-binding protein 4;Polyadenylate-binding protein no no 0 0 0 1.5 0.5 1 1 56.235 56.244 2 6.77E-05 16935 20230619_1880_Aki_TMTPro18x_K_F1 160.88 109.02 219520 179880 218610 233700 220840 252770 257600 260080 292940 269140 259780 265540 303010 240420 275060 317950 284010 283140 202980 165120 222300 231840 230280 254270 258690 265410 295130 271440 270050 268970 306450 252970 280920 316200 271640 269300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115810000 9887 1667 9352 18891;18892 15135 15135 1 9606 Homo sapiens -0.023299213394238905 GFGFVTFDDHDPVDK Unmodified 1694.7577 0.75765105 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28;A0A087WUI2;I6L957;A0A7I2V4N0 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 3.6 1.91 2 1 2 2 1 1 1 59.192 59.222 3;4 2.6888E-14 17954 20230619_1883_Aki_TMTPro18x_K_F4 185.27 163.43 616140 547340 640990 635970 688210 732650 737660 697570 611740 769850 765500 657300 826780 591160 876590 644130 609020 615910 570220 501730 649760 636450 711680 732920 737240 716970 637350 770340 780530 670210 842940 615410 874430 645740 585340 585270 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 11131000000 9888 3491 9353 18893;18894;18895;18896;18897;18898;18899;18900;18901;18902 15136;15137;15138;15139;15140;15141 15139 6 9606 Homo sapiens -0.06193747078259548 GFGFVTFENIDDAK Unmodified 1558.7304 0.73037367 3874 Q14011;Q53XX5;Q14011-2;K7EQR7;D6W5Y5;K7EPM4;K7EMY9;K7EJV1;K7ELT6;K7ER40;Q6ZR81;B4E2A3;K7EJV5;K7ELV6;K7ENX8 CIRBP Cold-inducible RNA-binding protein yes no 0 0 0 5 1.22 1 2 2 2 1 63.186 63.219 2;3 1.0888999999999999E-21 19554 20230619_1886_Aki_TMTPro18x_K_F6 267.75 206.1 906400 713150 822020 887120 722450 825890 975930 970780 1012900 1050500 975970 1035500 1132500 1012800 1005300 1175200 1019000 1286100 837280 654450 841080 881030 765340 843070 970550 983920 1028800 1056700 1010500 1051100 1145100 1054200 1026300 1184000 976700 1219400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1643599999.9999998 9889 3874 9354 18903;18904;18905;18906;18907;18908;18909;18910 15142;15143;15144 15143 3 9606 Homo sapiens -0.026642306186204223 GFGFVTFENSADADR Unmodified 1631.7216 0.72159989 894 O43251-4;O43251-10;O43251-5;Q9NWB1-3;F8VZG9;A0A8Q3WKT3;Q9NWB1-2;F8WSN4;J3KNW3;B0QYY4;B7ZLH9;B7Z1U7;I3L1D4;A0A6Q8PH77;A0A087X2B1;A0A804HJM2;A0A994J531;A0A0G2JRA5;X5DNY3;A0A8Q3SI58;X5D7T5;X5DP44;O43251-2;A0A6Q8PFM4;O43251-7;Q8TCM0;S4R469;A0A804HKG7;A0A6Q8PHA3;A0A6Q8PGE0;B0QYV1;F8VZY7;A0A286YEU2;F8VR27;O43251-6;O43251-8;Q59HD3;O43251-9;Q9NWB1;Q9NWB1-5;Q9NWB1-4;O43251;A0A8Q3SI75;A0A8Q3SI19;A0A0G2JSB3;S4R3K7;A0A0G2JRD1;B0QYY7 RBFOX2;RBFOX1;A2BP1;DKFZp547L059 RNA binding protein fox-1 homolog 2;RNA binding protein fox-1 homolog 1;RNA binding protein fox-1 homolog yes no 0 0 0 4.5 0.957 1 2 2 1 60.52 60.553 2;3 4.4136E-52 18546 20230619_1883_Aki_TMTPro18x_K_F4 237.32 230.74 98942 81161 96859 95589 90961 109100 120320 109640 108410 112300 125690 120070 123180 105760 125080 132630 118770 133180 91474 74428 98500 95562 95746 109290 119240 112070 111790 113560 128040 121130 125870 110980 126860 132860 113800 126440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 280590000 9890 894 9355 18911;18912;18913;18914;18915;18916 15145;15146;15147 15146 3 9606 Homo sapiens -0.06899204255091718 GFGFVTFSSMAEVDAAMAARPHSIDGR 2 Oxidation (M) 2858.3116 0.31159745 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28;A0A087WUI2;I6L957;A0A7I2V4N0;A0A7I2YQN4 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 2 1 8 0 1 58.278 58.324 4 0.00049415 17099 20230619_1888_Aki_TMTPro18x_K_F8 71.002 63.38 16775 16968 19788 19599 17805 17942 20734 19489 24148 16914 17555 17438 16325 14231 15914 19778 18962 16396 15557 15546 19818 19565 18710 18313 20840 19744 24120 17259 18269 17580 16691 15071 16379 19586 18096 15619 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86948000 9891 3491 9356 18917 15148 15148 2152;2153 1 9606 Homo sapiens -0.043225886126492696 GFGFVTYATVEEVDAAMNAR Oxidation (M) 2162.9943 0.99426928 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;A0A7I2YQX9;F8VZ49;B4E0B5;B4DP35;A0A2R8Y4L2;F8W646;A0A7I2YQV3;A0A7I2V4M0;A0A7I2V3W4;A0A7I2V3C7;F8VYN5;A0A7I2V2Z4 HNRNPA1;HNRPA1;hCG_2020860 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 1 0 6 0.816 1 1 1 63.334 63.377 3 4.0959E-16 19453 20230619_1885_Aki_TMTPro18x_K_F5 149.52 133.21 138220 93310 121900 172530 139230 144560 153670 127940 181770 142280 142700 168140 163050 165230 120750 147430 165230 172980 127550 86106 125750 167130 143630 147850 154870 132440 181950 143950 149270 169290 163990 169500 126130 149820 157720 163990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1182500000 9892 640 9357 18918;18919;18920 15149;15150 15149 379 2 9606 Homo sapiens -0.040708083668505424 GFGFVTYATVEEVDAAMNAR Unmodified 2146.9994 0.99935466 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;A0A7I2YQX9;F8VZ49;B4E0B5;B4DP35;A0A2R8Y4L2;F8W646;A0A7I2YQV3;A0A7I2V4M0;A0A7I2V3W4;A0A7I2V3C7;F8VYN5;A0A7I2V2Z4 HNRNPA1;HNRPA1;hCG_2020860 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 6.5 1.12 1 1 1 1 65.427 65.46 3 2.0727E-66 20271 20230619_1887_Aki_TMTPro18x_K_F7 294.93 282.89 184040 103620 148930 184690 136030 177640 182870 155380 183720 178980 194000 207620 226610 213440 190780 219070 203020 268600 169580 95659 154280 179570 143840 179470 181650 161080 187520 180570 200090 209670 228680 220250 195480 222740 194580 254350 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 966360000 9893 640 9357 18921;18922;18923;18924 15151;15152;15153;15154 15154 4 9606 Homo sapiens -0.02826504504218974 GFGFVTYATVEEVDAAMNARPHK Unmodified 2509.206 0.20599339 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;A0A7I2YQX9;F8VZ49;B4E0B5;B4DP35;A0A2R8Y4L2;F8W646;A0A7I2YQV3;A0A7I2V4M0;A0A7I2V3W4;A0A7I2V3C7;F8VYN5;A0A7I2V2Z4 HNRNPA1;HNRPA1;hCG_2020860 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 1 4.75 3.27 1 1 2 67.67 67.684 4 9.9798E-34 18909 20230619_1888_Aki_TMTPro18x_K_F8 194.92 166.1 433140 385530 424740 425120 335230 351300 415930 382520 366400 405240 399260 363140 415920 371550 444100 478430 421690 465090 400660 353230 430770 425370 357110 361810 413370 389480 377600 406950 408790 371180 425380 388610 450070 478210 403980 441730 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 376330000 9894 640 9358 18925;18926;18927;18928 15155;15156;15157;15158 15157 4 9606 Homo sapiens 0.01175863324169768 GFGFVTYATVEEVDAAMNARPHK Oxidation (M) 2525.2009 0.20090801 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;A0A7I2YQX9;F8VZ49;B4E0B5;B4DP35;A0A2R8Y4L2;F8W646;A0A7I2YQV3;A0A7I2V4M0;A0A7I2V3W4;A0A7I2V3C7;F8VYN5;A0A7I2V2Z4 HNRNPA1;HNRPA1;hCG_2020860 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 1 1 7.67 0.471 1 2 60.177 60.217 4;5 1.7798999999999998E-19 17888 20230619_1888_Aki_TMTPro18x_K_F8 159.06 130.55 90687 78799 78587 88976 88953 74221 87134 71841 93199 74050 80193 77913 83615 71909 80769 90349 81067 85965 83795 72219 81019 88844 91364 76222 88120 73715 94043 74886 83040 78764 85104 75337 82254 90226 77595 81678 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 546010000 9895 640 9358 18929;18930;18931 15159;15160 15160 379 2 9606 Homo sapiens -0.0006844053846180032 GFGFVTYSCVEEVDAAMCAR Oxidation (M) 2283.9599 0.95987438 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;P51991-2;B4DDB6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 1 0 5.5 0.5 1 1 61.657 61.709 3 5.9563E-12 18647 20230619_1885_Aki_TMTPro18x_K_F5 140.89 132.9 93032 69383 94771 104880 83567 99023 97571 89876 121540 91630 118380 116810 108590 114220 116000 142980 120520 143890 85990 63824 96025 102870 88146 100320 98316 92580 122180 93370 121190 117480 111660 119310 118240 143180 115430 136570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 251820000 9896 1469;2450 9359 18932;18933 15161 15161 972 1 9606 Homo sapiens -0.13074715841594298 GFGFVTYSCVEEVDAAMCAR Unmodified 2267.965 0.96495976 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;P51991-2;B4DDB6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 7 0 1 63.527 63.56 3 7.9022E-08 19466 20230619_1887_Aki_TMTPro18x_K_F7 105.5 102.86 27407 25105 29061 38428 29677 36312 37528 36636 42084 46969 47866 43654 51706 47027 43681 43272 44732 56211 25374 23080 29460 37656 31010 36864 37523 37689 42868 46816 48973 44577 52279 48218 44618 44274 42868 53210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35569000 9897 1469;2450 9359 18934 15162 15162 1 9606 Homo sapiens -0.11830411979008204 GFGFVYFQNHDAADK Unmodified 1714.774 0.77396981 3836 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 7.5 0.5 1 1 56.009 56.069 4 1.2585E-10 16190 20230619_1888_Aki_TMTPro18x_K_F8 159.52 140.2 140860 112420 163690 143370 132900 163360 156910 138430 177480 171130 146520 172290 159880 148810 182480 165130 155660 189910 130400 103190 163820 142540 141210 163060 157470 144080 178480 171280 152630 173900 163890 155130 183600 167130 149430 179990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 235770000 9898 3836 9360 18935;18936 15163;15164 15164 2 9606 Homo sapiens -0.0548262112147313 GFGGAMTDAAALNILALSPPAQNLLLK Unmodified 2666.4466 0.44655801 792 B7Z6S9;A0A068F579;A0A068F658;A0A0G2JLB3;B2R6A7;D3DV87;B7Z7G9;A0A0G2JNZ5;P04062-4;P04062-2;P04062;A0A068FB60 GBA Glucosylceramidase yes no 0 0 0 5 0 1 66.833 66.876 3 3.0161E-09 20910 20230619_1885_Aki_TMTPro18x_K_F5 114.04 104.38 3446.1 4579.5 4925.9 7204.1 5726.7 5482.2 6157.3 6933.9 5797.5 7528.1 7612.8 6734.6 5689.9 5103.9 8410.2 5503.7 8223.2 8305.8 3210.3 4207.1 4906.5 7031.5 5882.9 5707 6175.8 6999.2 6004.9 7544.3 7640.8 6815.4 5998.4 5344.9 8477.6 5689.5 7870.3 7858.9 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7361400 9899 792 9361 18937 15165;15166 15165 2 9606 Homo sapiens 0.1799925959144275 GFGGITHGPPEK Unmodified 1195.5986 0.59857163 2373 B3KPA6;B4DEA8;P49748-2;P49748;P49748-3;Q53HR2 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 8 0 1 42.367 42.37 3 0.00024537 10430 20230619_1888_Aki_TMTPro18x_K_F8 96.604 52.843 70741 51630 64141 74422 100610 96668 90173 96016 112550 82132 95419 108580 102140 86826 97829 98353 107110 106360 65317 47471 66307 73543 101270 96049 92185 97736 112630 84596 99098 108280 103840 90879 100070 99108 102390 100940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47174000 9900 2373 9362 18938 15167;15168 15167 2 9606 Homo sapiens 0.008596288749458836 GFGHGAGLLAHQR Unmodified 1319.6847 0.6847013 4098 Q6DD87 ZNF787 Zinc finger protein 787 yes yes 0 0 0 3 0 1 34.901 34.962 4 6.0377E-06 7578 20230619_1882_Aki_TMTPro18x_K_F3 129.88 116.21 22263 18518 21010 26045 25897 27565 26996 27061 35151 16103 16410 13339 14909 15343 23177 14549 16757 14847 20578 17013 21551 25690 26549 27740 27388 27391 34538 16819 17650 13754 15679 15711 23019 14681 16082 14106 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16733000 9901 4098 9363 18939 15169 15169 1 9606 Homo sapiens 0.037646335003273634 GFGHIGIAVPDVYSACK Unmodified 1789.8821 0.88214006 3793 X5DNM4;V9HW62;Q04760-2;Q04760 GLO1;HEL-S-74 Lactoylglutathione lyase yes no 0 0 0 2.5 0.5 1 1 57.709 57.732 4 0.00028315 17677 20230619_1881_Aki_TMTPro18x_K_F2 85.42 66.345 20413 9531.8 16016 18436 17389 26960 18180 17343 23852 16426 17533 17695 21074 20551 11542 27358 25465 37798 18791 8819.8 16679 17970 18059 26356 18454 18360 23707 16722 18428 18031 20982 21474 12765 27907 24316 35745 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 379600000 9902 3793 9364 18940;18941 15170 15170 1 9606 Homo sapiens 0.01879427137419043 GFGLLGSIFGK Unmodified 1094.6124 0.61243078 1514 A0A3B3ISV4;A8K0F7;Q8N0U8 VKORC1L1 Vitamin K epoxide reductase complex subunit 1-like protein 1 yes no 0 0 0 7 0 1 65.092 65.119 3 0.0004357 20157 20230619_1887_Aki_TMTPro18x_K_F7 96.342 77.099 25110 16779 27085 26579 21314 26062 22835 25604 33679 24660 22775 27971 34268 25866 26656 28461 34487 38734 23207 15451 27257 26022 22672 26364 23286 26165 33251 25095 24413 28160 34239 26921 27680 29125 32950 36666 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35246000 9903 1514 9365 18942 15171 15171 1 9606 Homo sapiens 0.0689090637404206 GFGQEVHR Unmodified 928.45151 0.45151346 960 B7Z876;B7Z3A4;A0A0A0MT33;Q9UPN6;Q9UPN6-2;Q9H8B2;Q8NDE9;Q59EY7 SCAF8;DKFZp434J2412 Protein SCAF8 yes no 0 0 0 4.5 0.5 1 1 31.512 31.582 3 0.00020268 6151 20230619_1883_Aki_TMTPro18x_K_F4 157.68 134.85 71043 55245 73341 78769 92185 97721 90518 93011 119930 87763 100080 99332 97875 82638 88421 82912 106950 100600 65689 50775 74629 77836 94224 97249 92250 95188 119610 89393 103500 99733 99531 85834 91064 84333 102110 95388 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 62364000 9904 960 9366 18943;18944 15172;15173;15174 15172 3 9606 Homo sapiens -0.015574232193330317 GFGSEEGSR Unmodified 924.39372 0.39372381 6 A0A023T787;Q9Y5S9 RBM8;RBM8A RNA-binding protein 8A yes no 0 0 0 1.5 0.5 1 1 32.942 32.971 2 3.4925E-12 6851 20230619_1881_Aki_TMTPro18x_K_F2 234.91 202.77 204220 92359 245460 261920 362210 403760 276380 315890 347200 215470 340400 407070 328070 304940 329450 138790 395350 370010 188620 86100 247770 251980 364730 395070 285940 326020 348910 229210 349510 400570 335490 309230 337500 155760 377460 349080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 615320000 9905 6 9367 18945;18946 15175;15176 15176 2 9606 Homo sapiens -0.07149729935417781 GFGTDEQAIIDCLGSCSNK Unmodified 2070.8987 0.89865434 4024 Q6ICS0;Q59EP1 ANXA11 Annexin yes no 0 0 0 5 0 1 61.954 62.003 3 1.6711E-31 18799 20230619_1885_Aki_TMTPro18x_K_F5 235.24 231 58351 47053 60858 62471 55334 63146 74151 67740 71122 72983 57976 55221 77698 50021 59918 84663 65158 69422 53970 43206 61555 61837 58396 63895 73563 69034 72165 72923 60947 56736 77728 53673 61670 83583 62322 66083 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113840000 9906 4024 9368 18947 15177 15177 1 9606 Homo sapiens -0.09395904549410261 GFGTDEQAIVDVVANR Unmodified 1689.8322 0.83221298 2493 B4DT77;B4DWU2;B4DHY4;Q53HM8;P20073-2;P20073;B2R7L2;B2R657 ANXA7 Annexin;Annexin A7 yes no 0 0 0 4 0.816 1 1 1 61.556 61.583 3 1.1481E-33 18981 20230619_1883_Aki_TMTPro18x_K_F4 200.55 176.46 76184 72257 73607 81995 86204 84100 91601 96612 97089 74016 85698 70615 81571 77315 86195 83173 83695 81886 70495 66206 75221 82066 88595 85210 92220 97214 98059 75944 88206 72174 83655 79811 87413 83437 80090 77796 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219840000 9907 2493 9369 18948;18949;18950 15178 15178 1 9606 Homo sapiens 0.014890157331137743 GFGYGQGAGALVHAQ Unmodified 1431.6895 0.6895119 659 A0A024RBB5;F8VW96;Q16527 CSRP2 Cysteine and glycine-rich protein 2 yes no 0 0 0 8 0 1 49.654 49.727 2 0.083238 13398 20230619_1888_Aki_TMTPro18x_K_F8 65.719 52.666 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9908 659 9370 18951 15179 15179 1 9606 Homo sapiens -0.009065271475719783 GFHQVPFAPIVFIER Unmodified 1755.9461 0.94606094 2024;1277 A0A1B0GVU9;Q9H3A5;Q9BUZ3;B4DDN1;Q96AW5;H7C0R3;A0A0U1RQX5;A0A0U1RRC8;Q53HS0;A8K3A8;P47897-2;P47897;B4DNN3 QARS Glutamine--tRNA ligase no no 0 0 0 4 0 1 61.989 61.993 3 1.7198E-10 19169 20230619_1883_Aki_TMTPro18x_K_F4 148.66 129.6 40132 23955 39267 37213 36913 37686 38924 44727 50180 50586 51092 49658 54900 47611 48050 53546 50546 58328 37039 22066 39905 36502 38577 38225 39507 45339 50536 50776 52527 50391 55589 49502 49152 53967 48392 55321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83330000 9909 1277;2024 9371 18952 15180 15180 1 9606 Homo sapiens 0.09832575356676898 GFIGPGIDVPAPDMSTGER Oxidation (M) 1930.9095 0.90947702 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;P00367-3;A0A804HJD7;B3KT18;A0A804HKE0;P00367-2;Q59FQ4 GLUD1 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase yes no 0 1 0 4.5 0.5 1 1 57.346 57.378 3 0.0040216 17182 20230619_1883_Aki_TMTPro18x_K_F4 65.47 56.064 68992 52795 61900 63077 57667 75329 76173 66929 86945 73334 75387 69516 78447 71791 80076 82382 77891 84983 63715 48435 63438 63024 60846 75025 76031 69146 87455 73709 78005 70863 80079 74531 81293 82759 74596 80663 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122930000 9910 2542 9372 18953;18954 15181;15182 15181 1545 2 9606 Homo sapiens -0.018741341128816202 GFIGPGIDVPAPDMSTGER Unmodified 1914.9146 0.9145624 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;P00367-3;A0A804HJD7;B3KT18;A0A804HKE0;P00367-2;Q59FQ4 GLUD1 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase yes no 0 0 0 6 0 1 61.022 61.079 3 0.00013954 18580 20230619_1886_Aki_TMTPro18x_K_F6 74.793 63.319 49426 43963 48493 41964 34090 38210 49838 49858 57440 67342 56948 65452 69784 52232 53227 85906 70124 79508 45721 40231 49085 42563 36982 39225 49591 50589 58135 67025 59057 66083 70001 56123 55535 85314 66996 75551 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37297000 9911 2542 9372 18955 15183 15183 1 9606 Homo sapiens -0.006298302502500519 GFIMAEVMK Unmodified 1024.5086 0.50855934 3129 J3KQ32;Q9NTK5;Q53SQ6;Q9NTK5-2 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 0 1 0 1 61.522 61.522 2 1.3681E-06 19084 20230619_1880_Aki_TMTPro18x_K_F1 138.54 91.478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9912 3129 9373 18956 15184 15184 1 9606 Homo sapiens -0.0027146004947553593 GFIYVHKPPVHIR Unmodified 1561.8882 0.88815213 315 A0A024R4Z6;Q08945 SSRP1 FACT complex subunit SSRP1 yes no 0 0 1 7.5 0.5 1 1 43.831 43.882 5 1.0793E-10 10826 20230619_1887_Aki_TMTPro18x_K_F7 147.37 130.84 276890 217810 261890 311330 234160 280870 284030 281790 351420 343750 282380 303020 326840 261090 300370 338920 308970 338790 255860 200190 267190 306190 247060 286230 285570 289550 351630 342860 295080 307900 330830 274960 306600 339200 295750 321680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 427160000 9913 315 9374 18957;18958 15185 15185 1 9606 Homo sapiens 0.1296835822192861 GFLAEEK Unmodified 792.40177 0.4017693 1120 A0A0S2Z583;Q8TC12;A0A0S2Z575;Q8TC12-2;Q8TC12-3;H0YJ46 RDH11 Retinol dehydrogenase 11 yes no 0 0 0 4 0.816 1 1 1 48.083 48.149 2 0.025503 13368 20230619_1882_Aki_TMTPro18x_K_F3 102.71 61.768 59694 49413 62514 68433 63469 77035 68540 68250 87459 65531 70898 71262 72741 63687 73091 79732 90857 83100 55223 45389 63329 67632 66062 77008 69394 70271 87297 66604 73613 71861 74244 66789 75330 80033 86705 78921 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204570000 9914 1120 9375 18959;18960;18961 15186 15186 1 9606 Homo sapiens -0.002735509479975917 GFLAGYVVAK Unmodified 1023.5753 0.57531699 3181 L0R6Q1 SLC35A4 yes yes 0 0 0 4.5 0.5 1 1 59.831 59.859 3 0.0030557 18289 20230619_1883_Aki_TMTPro18x_K_F4 76.827 58.515 38941 36699 39481 42471 45618 49436 47819 46360 54668 44809 43927 39855 42095 38865 43880 44611 46675 49154 36046 33633 40174 42514 46951 49399 48287 47532 54856 45244 45478 40670 43135 40429 44748 44991 44649 46629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110620000 9915 3181 9376 18962;18963 15187 15187 1 9606 Homo sapiens 0.0644723482827203 GFLDACEK Unmodified 938.41677 0.41676744 2867;2868 E5KND5;Q96RP9;Q96RP9-2;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 0 4 0 1 49.503 49.537 2 0.0042389 13763 20230619_1883_Aki_TMTPro18x_K_F4 117.04 72.398 192740 158990 175500 174850 186880 218480 243560 222900 282490 227230 233170 221270 272800 198040 205060 280830 271200 247250 178090 145710 179940 175940 194890 217720 243350 227510 283450 229350 243140 224300 273800 209540 213770 278760 258680 235280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107670000 9916 2867;2868 9377 18964 15188 15188 1 9606 Homo sapiens -0.054904271423197315 GFLEDLAPPER Unmodified 1242.6245 0.62445203 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPW9;H7C3P6;A0A8V8TQG1;H0YCT1 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 3 0 1 58.657 58.688 3 4.2238E-05 17875 20230619_1882_Aki_TMTPro18x_K_F3 112.15 91.246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9917 1852 9378 18965 15189 15189 1 9606 Homo sapiens 0.012844783265336446 GFLFGPSLAQELGLGCVLIR Unmodified 2146.1609 0.1608811 3401 P07741;P07741-2;H3BQB1;H3BQF1 APRT Adenine phosphoribosyltransferase yes no 0 0 0 5 0 1 67.167 67.21 3 0.00651 21085 20230619_1885_Aki_TMTPro18x_K_F5 62.475 50.115 2175.6 1799.5 2476 3564.6 2886.8 2785.7 2161.4 1699.1 2668.6 2440.2 2070.4 3069.9 2279.5 1459.4 3559 2058.3 1899.5 3350.3 2014.2 1660.9 2501.6 3438.4 2943.6 2850.2 2236.9 1836.1 2668.4 2446.1 2171.4 3027.2 2375.8 1594.1 3497.2 2135.1 1843.5 3163.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3379300 9918 3401 9379 18966 15190 15190 1 9606 Homo sapiens 0.13364709319466783 GFLGCFPDIIGTHK Unmodified 1560.7759 0.77588407 1696 A0A7P0T8Z7;A0A7P0Z4A2;A0A7P0Z4A5;A0A7P0T8D4;B2RAU5;A0A7P0T8S8;A0A7P0T8Z2;A0A7P0T8C7;Q9Y5X1;B3KXH8;A0A7P0TBI9;A0A7P0T8M2 SNX9 Sorting nexin;Sorting nexin-9 yes no 0 0 0 3 0 1 62.002 62.031 3 3.961E-08 19251 20230619_1882_Aki_TMTPro18x_K_F3 145.17 125.33 184620 143940 180700 154630 144990 182940 188340 174880 185760 177750 192850 176520 226590 188720 183930 229700 208810 246900 170630 131920 183220 155790 154730 182650 187360 179310 189660 179500 198890 179860 228140 196500 189420 230980 199810 234190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 387770000 9919 1696 9380 18967 15191 15191 1 9606 Homo sapiens 0.017927163627518894 GFLIDGYPR Unmodified 1036.5342 0.53418046 3375 Q6FGX9;Q53EY8;Q5T9B7;P00568;H0YID2;Q9Y6K8-2;Q9Y6K8-3;Q9Y6K8 AK1;AK5 Adenylate kinase isoenzyme 1;Adenylate kinase isoenzyme 5 yes no 0 0 0 8 0 1 54.986 55.053 2 0.004112 15773 20230619_1888_Aki_TMTPro18x_K_F8 95.815 70.892 1287000 1137600 1399300 1513700 1361000 1516900 1711100 1669300 1705700 1987200 1938900 2161600 2135900 1851700 1960400 2353300 2370500 2504800 1191500 1044200 1412500 1497800 1425300 1537000 1705000 1703500 1748800 1995700 1988800 2175600 2166000 1946800 2021400 2363900 2265000 2377000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 260880000 9920 3375 9381 18968 15192;15193 15193 2 9606 Homo sapiens 0.017374737888076197 GFLNSSELSGLPAGPDR Unmodified 1715.8479 0.84786304 2870 E5KS95;P43897;B4DHY8;C9JG32;C9JT21;F8VPA7;F8VS27;P43897-4 TSFM Elongation factor Ts, mitochondrial;Elongation factor Ts yes no 0 0 0 6.5 0.5 1 1 58.806 58.864 3 1.1984E-13 17639 20230619_1886_Aki_TMTPro18x_K_F6 158.98 139.88 27599 28939 32366 27104 43569 32238 37951 42077 37198 38498 35278 35352 40887 30856 41777 36981 33804 36919 25602 26465 32601 27639 44067 32495 38582 42177 37904 38980 36548 35878 41556 32325 42000 37079 32442 35055 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147120000 9921 2870 9382 18969;18970 15194 15194 1 9606 Homo sapiens 0.018573022501868763 GFLSDLR Unmodified 806.42865 0.42865276 267 Q658J0;A0A024R3V5;A0A024R3V7;Q9GZT8-2;Q9GZT8 DKFZp762L015;NIF3L1 NIF3-like protein 1 yes no 0 0 0 7.5 0.5 1 1 52.469 52.543 2 0.041851 14712 20230619_1887_Aki_TMTPro18x_K_F7 89.903 34.508 152260 122710 148090 152450 148390 194190 172290 174190 196960 145820 139530 124190 148190 116640 147020 164640 143620 132580 140740 112600 150870 152050 155020 192640 173070 178530 196830 148340 146170 126950 150880 123120 149430 162840 137370 126310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157450000 9922 267 9383 18971;18972 15195 15195 1 9606 Homo sapiens 0.01769557663192245 GFMQGHVNR Oxidation (M) 1060.4872 0.48724704 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5;E7EWK3 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 1 0 8 0 1 27.901 27.93 3 0.019834 4945 20230619_1888_Aki_TMTPro18x_K_F8 60.436 48.843 8977.5 6253.5 9228.8 8280.5 11076 14090 10983 10895 15492 6940 8533.8 6864.9 6331.6 5835.5 11452 5196.3 6598.3 6675.3 8295.5 5745.4 9379.2 8270.3 11378 13725 11212 11241 15217 7243.8 8984.1 6943.1 6776.2 6020.5 11253 5336 6360.6 6324.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1971000 9923 4503 9384 18973 15196 15196 2796 1 9606 Homo sapiens -0.04057709033986612 GFMTAHGQPDQPR Oxidation (M) 1456.6517 0.65174619 4490 Q9H089;H7C2X7 LSG1 Large subunit GTPase 1 homolog yes no 0 1 0 4 0.816 1 1 1 30.962 31.038 3 3.1392E-06 6087 20230619_1885_Aki_TMTPro18x_K_F5 129.74 119.99 11720 9994.2 11814 11448 16889 15459 16346 14160 17273 12926 16963 14773 15117 12027 13261 14617 17974 12614 10841 9161.5 12066 11498 17098 15308 16532 14526 17513 13195 17321 14834 15398 12632 13783 14534 17115 12022 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35317000 9924 4490 9385 18974;18975;18976 15197;15198 15198 2791 2 9606 Homo sapiens -0.058313614047165174 GFMVQTGDPTGTGR Oxidation (M) 1438.6511 0.65107749 266 A0A024R3V4;H7BZ14;Q9H2H8;C9K058;B4DN80 PPIL3 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase-like 3 yes no 0 1 0 6 0 1 42.972 43.066 2 0.030225 10843 20230619_1886_Aki_TMTPro18x_K_F6 64.73 53.978 11484 11436 12001 13614 17654 16261 16852 13683 15765 18811 19492 14883 17931 15641 18973 18346 20434 24447 10637 10482 12241 13602 17834 16195 16996 14299 16287 18617 19729 15327 18401 16268 19354 18733 19565 23140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20532000 9925 266 9386 18977 15199 15199 157 1 9606 Homo sapiens -0.05070200844443207 GFMVQTGDPTGTGR Unmodified 1422.6562 0.65616287 266 A0A024R3V4;H7BZ14;Q9H2H8;C9K058;B4DN80 PPIL3 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase-like 3 yes no 0 0 0 7 0 1 47.019 47.107 2 3.6122E-08 12239 20230619_1887_Aki_TMTPro18x_K_F7 171.67 123.23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9926 266 9386 18978 15200 15200 1 9606 Homo sapiens -0.038258969818116384 GFNEGLWEIDNNPK Unmodified 1631.758 0.7579854 3306 O75475;Q05CM9;O75475-3;O75475-2 PSIP1 PC4 and SFRS1-interacting protein yes no 0 0 0 4.5 0.957 1 2 2 1 60.537 60.569 2;3 6.2549E-18 18538 20230619_1883_Aki_TMTPro18x_K_F4 218.11 197.59 191400 165440 184260 185730 176100 201450 190840 195640 208360 225200 212520 207270 235660 202840 217590 230970 223750 253010 176990 151620 187650 186180 184030 202420 192190 201030 211610 225460 218850 211090 238930 210930 222000 232850 214220 239960 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 802040000 9927 3306 9387 18979;18980;18981;18982;18983;18984 15201;15202;15203 15201 3 9606 Homo sapiens -0.03262327358402217 GFNEGLWEIENNPGVK Unmodified 1801.8635 0.8635131 182 A0A024R216;Q9Y3E1;H3BPM9 HDGFRP3 Hepatoma-derived growth factor-related protein 3 yes no 0 0 0 4.5 0.5 1 1 61.724 61.75 3 4.4658E-05 18680 20230619_1885_Aki_TMTPro18x_K_F5 95.822 75.716 174100 147930 195320 176330 154500 214630 175250 196970 224200 205480 202340 237630 233440 170370 219670 216400 238390 276830 161190 135660 195960 176320 164650 213620 177160 202600 224770 208180 210250 237360 236440 180610 224630 220090 228170 262160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 429600000 9928 182 9388 18985;18986 15204 15204 1 9606 Homo sapiens -0.005344112327748007 GFNLNPLNQDELK Unmodified 1500.7573 0.75725712 1460 A0A384NKN4;Q9NUG6 PDRG1 p53 and DNA damage-regulated protein 1 yes no 0 0 0 7 0 1 60.755 60.797 3 0.0076862 18127 20230619_1887_Aki_TMTPro18x_K_F7 67.997 48.682 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9929 1460 9389 18987 15205 15205 1 9606 Homo sapiens 0.02690877992586138 GFNLPYQDAR Unmodified 1179.5673 0.5672715 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7;A0A0G2JIC2 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 7.5 0.5 1 1 50.584 50.663 2 0.00010586 13777 20230619_1888_Aki_TMTPro18x_K_F8 160.16 143.22 296280 261150 317690 298110 285090 323210 303180 312390 333640 330450 312500 279990 333920 262810 300340 375890 354870 305380 274260 239360 320320 298510 299210 324740 305770 320320 337470 331470 322350 286210 338450 277690 309400 371750 338670 290980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 379880000 9930 1296 9390 18988;18989 15206;15207 15207 2 9606 Homo sapiens -0.015329441591575232 GFNPAQPLNIR Unmodified 1225.6568 0.65675521 1809 A0A8V8NBT1;Q12769;G3V198;E9PR16 NUP160 Nuclear pore complex protein Nup160 yes no 0 0 0 3 0 1 52.016 52.081 2 0.00072253 15055 20230619_1882_Aki_TMTPro18x_K_F3 130.31 106.88 180870 124340 145280 165050 142130 173930 150010 153830 188560 165350 133140 141750 168970 146270 151410 208620 193010 173470 166800 114250 150610 163400 148390 174690 151990 158860 187770 165870 140850 145200 170600 153990 156870 206500 184130 165210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200340000 9931 1809 9391 18990 15208 15208 1 9606 Homo sapiens 0.05295310520205021 GFNPPVLVFVQSIER Unmodified 1700.925 0.92499115 4710 Q9Y2R4;B3KM65;Q59H21 DDX52 Probable ATP-dependent RNA helicase DDX52 yes no 0 0 0 3.5 0.5 1 1 65.402 65.425 3 0.00075271 20551 20230619_1883_Aki_TMTPro18x_K_F4 79.81 66.719 7709.9 5694.2 7610.8 7034.7 8760.8 6718.8 8665.7 10557 10116 10636 7390.7 10358 8883.7 6878.8 8031 11970 10703 10617 7124 5226.4 7749.7 6997.6 8984.2 6913.6 8791.4 10513 10130 10726 7797.6 10402 8980.1 7480.8 8350.8 11858 10214 10099 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22241000 9932 4710 9392 18991;18992 15209 15209 1 9606 Homo sapiens 0.10256565257191141 GFNSVATAR Unmodified 921.46683 0.46682918 3394 P07099;R4SBI6;Q6FGZ3 EPHX1 Epoxide hydrolase 1 yes no 0 0 0 8 0 1 37.813 37.798 2 0.016011 8618 20230619_1888_Aki_TMTPro18x_K_F8 74.267 47.403 55523 36902 61690 63973 97556 103360 82165 94897 108240 65399 85156 97537 81812 71214 80017 66681 96950 79812 51328 34024 62710 62849 98071 101280 84532 96676 107720 68714 88394 96626 83557 74069 82247 67877 92479 75729 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12694000 9933 3394 9393 18993 15210 15210 1 9606 Homo sapiens 0.002954435778519837 GFNYTVFDCK Unmodified 1249.5438 0.54375887 4201 Q86YQ0;A0A140VK67;Q96MX6-2;Q96MX6 HZGJ;WDR92 WD repeat-containing protein 92 yes no 0 0 0 8 0 1 57.974 58.021 3 0.002013 17011 20230619_1888_Aki_TMTPro18x_K_F8 76.655 58.846 39715 31999 42516 38965 35516 41365 37882 40268 45180 44716 43092 39788 44320 37533 44953 44021 41340 42907 36741 29356 42826 38825 37528 41620 38315 41324 45545 44806 44350 40547 45217 39140 45497 44078 39599 40760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12280000 9934 4201 9394 18994 15211 15211 1 9606 Homo sapiens -0.07103125987987369 GFPGYMYTDLATIYER Unmodified 1895.8764 0.87638598 1233 A0A140VK65;P21281;B4DFM5;B4DQI9;Q71UA2;B4DWH7;C9JL73;P15313 ATP6V1B2;ATP6B1;ATP6V1B1 V-type proton ATPase subunit B, brain isoform;V-type proton ATPase subunit B, kidney isoform yes no 0 0 0 8 0 1 63.802 63.824 3 0.00059486 19454 20230619_1888_Aki_TMTPro18x_K_F8 74.783 61.803 110980 72623 77120 92596 99585 131710 98340 87647 97817 130550 121080 117420 134930 116130 119010 147950 126230 130510 102230 66715 81613 92313 101880 129150 99198 93735 100800 129240 123720 119780 136510 121500 121860 147110 120730 124130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144930000 9935 1233 9395 18995 15212 15212 1 9606 Homo sapiens -0.035717161649017726 GFPHVIYAR Unmodified 1058.5661 0.56614929 189 K7EIU8;A0A024R274;Q13485;K7EL18;K7EIJ2;B4DZP1;K7ES96;Q9BYG6;A0A087WUF3;K7EL15 SMAD4 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 4 yes no 0 0 0 3.5 0.5 1 1 43.602 43.659 3 0.00012747 11139 20230619_1883_Aki_TMTPro18x_K_F4 119.27 104.07 57837 44532 53222 58276 55369 63020 52003 53007 75705 54820 57222 55136 49775 46963 56989 58288 60068 53953 53425 40891 54504 57768 57327 63128 53365 54904 74981 55371 59248 55696 51428 49283 57999 58152 57400 51313 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58002000 9936 189 9396 18996;18997 15213;15214 15214 2 9606 Homo sapiens 0.039208862625855545 GFPPSASLCLLDLVK Unmodified 1615.8644 0.86436473 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 3 0 1 64.963 64.995 3 0.0009266 20522 20230619_1882_Aki_TMTPro18x_K_F3 75.669 62.532 9807.4 7752.4 9401.2 7383 8428 14386 8169.2 11666 10943 13258 11332 12711 11156 9883.1 9951.4 12369 14998 17361 9063.6 7097.3 9561.5 7586 8872 13942 8352 12128 11022 13291 11608 12823 11343 10428 10433 12658 14317 16428 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6925900 9937 3758 9397 18998 15215 15215 1 9606 Homo sapiens 0.08106711882533091 GFPTDATLDDIK Unmodified 1291.6296 0.62959699 2662 B5BUB5;P05455;E7ERC4;Q14730;E9PGX9 SSB Lupus La protein yes no 0 0 0 4.2 0.748 1 2 2 58.193 58.223 2;3 1.7911E-07 17746 20230619_1882_Aki_TMTPro18x_K_F3 143.96 113.71 272590 234730 294500 311060 292510 314270 331750 333060 346130 360030 338070 319460 380890 320820 328800 388140 350450 376460 252310 215480 297420 307910 304860 317970 332740 339660 351700 361150 349000 326330 384890 334520 336800 388150 335280 357600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 999690000 9938 2662 9398 18999;19000;19001;19002;19003 15216;15217;15218;15219 15216 4 9606 Homo sapiens -0.004552626014856287 GFPTEAER Unmodified 905.4243 0.42429566 4121 Q6P3X3;F8WCH1;A0A3B3IS02 TTC27 Tetratricopeptide repeat protein 27 yes no 0 0 0 2 0 1 38.483 38.547 2 0.0049878 9141 20230619_1881_Aki_TMTPro18x_K_F2 117.1 89.611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9939 4121 9399 19004 15220 15220 1 9606 Homo sapiens -0.03219951550386213 GFPTIYFSPANK Unmodified 1340.6765 0.6764876 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;B4DDM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 4 0.816 1 1 1 61.578 61.605 3 5.398E-07 18617 20230619_1885_Aki_TMTPro18x_K_F5 149.96 124.4 968670 801360 1015900 1011000 865000 1196700 1046000 1083500 1194400 1030700 1045500 989050 1027400 927740 1188400 1151500 1100800 1230200 896120 735360 1026100 1006300 917180 1192700 1049200 1113100 1201900 1043600 1079000 1004500 1057200 970860 1200600 1158000 1055000 1167100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2116399999.9999998 9940 2389 9400 19005;19006;19007 15221;15222 15222 2 9606 Homo sapiens 0.019776417403363666 GFPTIYFSPANKK Unmodified 1468.7715 0.77145062 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;B4DDM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 1 6 0 1 56.607 56.681 3 6.9467E-16 16715 20230619_1886_Aki_TMTPro18x_K_F6 182.02 164.27 275970 269640 277500 270260 264790 293590 316540 311550 305190 244930 239990 193620 208290 182360 302200 227550 238220 182010 255500 246770 281560 273440 277320 295650 315820 315240 308770 249590 247850 198730 218060 190820 301690 225670 228150 173570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 270210000 9941 2389 9401 19008 15223 15223 1 9606 Homo sapiens 0.05581575211499512 GFPTWLK Unmodified 847.45922 0.4592246 3456 P15311;Q6NUR7;B2R6J2;V9HW42;J7M2B1 EZR;HEL-S-105;EZR-ROS1 Ezrin;Tyrosine-protein kinase receptor yes no 0 0 0 4 0 1 60.381 60.383 2 0.0041784 18466 20230619_1883_Aki_TMTPro18x_K_F4 150.02 105.41 308200 237090 263950 317470 341770 468650 355960 388710 428080 258800 194500 126620 212920 150320 294490 220680 203930 117880 284540 217760 273460 315780 350160 460190 360130 398870 422370 264890 211130 135710 220430 158110 292580 215160 195400 113370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 347890000 9942 3456 9402 19009 15224 15224 1 9606 Homo sapiens 0.0293933604822314 GFPWDEYK Unmodified 1040.4603 0.46034682 2145 A8K9X5;Q9UNN5;Q9UNN5-2;B4DEJ6;B3KT28 FAF1 FAS-associated factor 1 yes no 0 0 0 6.5 0.5 1 1 59.504 59.558 2 0.0020362 17625 20230619_1887_Aki_TMTPro18x_K_F7 133.12 99.32 114270 82083 98574 114980 74617 112490 99979 111010 125900 143400 123840 148670 169960 136440 127060 172890 166420 176280 105460 75451 101210 113340 80404 113800 100200 114360 126860 143320 129310 150210 169950 143120 132390 173200 158920 167360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203570000 9943 2145 9403 19010;19011 15225 15225 1 9606 Homo sapiens -0.058264943735366614 GFQEDSEIR Unmodified 1079.4884 0.48835248 466 A0A024R7P3;A0A024R7N2;Q9HD20-2;Q9HD20;H7C3H2 ATP13A1 Manganese-transporting ATPase 13A1 yes no 0 0 0 1 0 1 40.22 40.22 2 6.9498E-05 10184 20230619_1880_Aki_TMTPro18x_K_F1 160.59 112.74 81760 65856 93947 95174 111000 118740 111550 121070 117630 112350 139980 145430 126810 115500 132830 109830 145490 128520 75687 60528 94689 94000 113880 118300 112680 123250 120330 114980 142050 145080 130170 119790 135520 111600 138960 121930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64768000 9944 466 9404 19012 15226 15226 1 9606 Homo sapiens -0.04821216184109289 GFQEVVTPNIFNSR Unmodified 1606.8104 0.81035532 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 2 0.816 1 1 1 60.613 60.626 3 3.8792E-22 18845 20230619_1881_Aki_TMTPro18x_K_F2 185.95 161.59 86509 71784 76236 75204 63792 68901 82944 87930 76579 95755 99011 104220 108450 106390 91460 109860 99745 114900 79921 65757 78103 75661 67739 70629 82385 88711 79347 96555 100980 105490 109660 109800 93867 110590 95461 109020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 621250000 9945 2326 9405 19013;19014;19015 15227;15228 15228 2 9606 Homo sapiens 0.03122255775224403 GFQFVSSSLPDICYR Unmodified 1774.8349 0.83485551 1099 A0A0S2Z4Q3;A0A0S2Z4K2;P62633-2;P62633-8;P62633-5;P62633;P62633-4;P62633-6;A0A0S2Z4P7 CNBP Cellular nucleic acid-binding protein yes no 0 0 0 2 0 1 62.408 62.417 3 0.0010678 19687 20230619_1881_Aki_TMTPro18x_K_F2 57.499 44.621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9946 1099 9406 19016 15229 15229 1 9606 Homo sapiens -0.021568521335439073 GFQGVMK Unmodified 765.38435 0.3843451 2516 D6RC14;B4DW56;H0Y9G6;E7ETU7;B4DKM0;P09001 MRPL3 39S ribosomal protein L3, mitochondrial yes no 0 0 0 2 0 1 47.229 47.304 2 0.044641 13200 20230619_1881_Aki_TMTPro18x_K_F2 88.643 62.566 187340 150130 180490 151630 222460 269750 234160 218730 314680 95596 95544 86148 112870 72083 149160 94332 120230 74826 173160 137500 184440 154670 228400 262580 237640 223620 306580 103400 109140 87559 116300 76085 149110 93536 115000 71443 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45407000 9947 2516 9407 19017 15230 15230 1 9606 Homo sapiens -0.007731697546546457 GFQHCVK Unmodified 874.41196 0.41195684 1543 P50851;P50851-2;A0A494BZW2;A0A494C1L5;E9PEM5;A0A494C0R9;A0A8I5QKR6;Q5T321;Q8NFP9 LRBA;NBEA Lipopolysaccharide-responsive and beige-like anchor protein;Neurobeachin yes no 0 0 0 1 0 1 34.776 34.776 3 0.013946 7903 20230619_1880_Aki_TMTPro18x_K_F1 80.462 63.498 43948 28875 46228 53971 59657 55295 55414 64627 60146 40154 51205 47978 44128 45845 47900 38216 61015 47302 40605 26653 47007 52421 60696 56005 56284 64704 60575 42147 52639 48302 45518 46929 49304 39077 58157 44881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12993000 9948 1543 9408 19018 15231 15231 1 9606 Homo sapiens -0.030272664944163807 GFQVAPEHHNDHK Unmodified 1514.7015 0.70147357 3485 Q59FI0;Q9HBB2;V9HWB7;P21399 IRP1;HEL60;ACO1 Aconitate hydratase;Cytoplasmic aconitate hydratase yes no 0 0 0 5 0 1 31.498 31.576 5 0.0049984 6248 20230619_1885_Aki_TMTPro18x_K_F5 71.548 54.882 12798 10210 13595 20184 21114 21166 24534 21500 22961 17584 26754 22392 19625 19673 19483 15063 24693 25681 11838 9425.3 13903 19549 21396 21323 24472 21851 23589 18135 26930 22432 20270 20141 20077 15821 23583 24276 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8105700 9949 3485 9409 19019 15232 15232 1 9606 Homo sapiens -0.035289104044068154 GFRDDFLGGR Unmodified 1138.552 0.55195579 3914 Q15056-2;A0A7I2V385;A4D198 EIF4H;LOC392647 Eukaryotic translation initiation factor 4H yes no 0 0 1 7.5 0.5 1 1 45.973 46.036 3 0.0033978 11754 20230619_1887_Aki_TMTPro18x_K_F7 81.335 66.669 102790 93359 98330 96727 81085 86829 95106 96519 115340 125800 107140 84874 118960 88755 81588 146490 115580 90577 95080 85485 99976 97362 85981 88845 95749 98701 116130 124320 110620 88293 119210 94485 85853 142960 110080 86715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94865000 9950 3914 9410 19020;19021 15233 15233 1 9606 Homo sapiens -0.011778109563465478 GFRDDPTVHDGPDR Unmodified 1582.7124 0.71243219 217 A0A024R2X2;Q92551-2;Q92551 IHPK1;IP6K1 Inositol hexakisphosphate kinase 1 yes no 0 0 1 2 0 1 32.287 32.347 4 0.00030783 6646 20230619_1881_Aki_TMTPro18x_K_F2 95.822 81.565 17813 13328 19040 20327 19845 23684 23177 22870 27630 25475 25377 26957 25836 23830 22481 30979 31113 31538 16472 12261 19265 19988 20654 23662 23310 23489 27803 25657 26171 27197 26219 25055 23443 31020 29689 29947 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17270000 9951 217 9411 19022 15234 15234 1 9606 Homo sapiens -0.055615528207681564 GFSAEQIAR Unmodified 977.49304 0.49304393 811 Q96SP2;A0A8I5KUC4;A0A8I5KY62;A0A8I5QJM4;A0A8I5KYH1;A0A8I5QKX7;B4DH58;A0A087WU53;Q9H0U3 MAGT1 Magnesium transporter protein 1 yes no 0 0 0 5 0 1 42.257 42.34 2 0.0091616 10506 20230619_1885_Aki_TMTPro18x_K_F5 86.67 66.893 52674 42368 50128 52559 66783 76380 61286 65403 77311 57317 73015 78356 74373 66871 68230 71001 80891 74543 48681 38876 51403 52545 67955 75159 62608 67336 77610 59045 75207 78209 75608 69545 70199 71486 77230 70787 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50434000 9952 811 9412 19023 15235 15235 1 9606 Homo sapiens 0.0033971274932582674 GFSDKLDFLEGDQK Unmodified 1597.7624 0.76240208 3090 Q6IB29;H7C2Q8;Q99848 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 0 0 1 5.5 0.5 1 1 60.217 60.274 3;4 1.3102E-08 18225 20230619_1886_Aki_TMTPro18x_K_F6 161.63 131.3 39903 29043 34077 42267 30190 37308 35018 39594 43878 50189 42406 55150 56968 53449 32320 60932 54460 62106 36827 26706 35093 41514 31857 38134 35322 40576 44203 50297 44269 55665 56566 55563 34681 61091 51946 58948 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52268000 9953 3090 9413 19024;19025 15236;15237 15237 2 9606 Homo sapiens -0.012568629355200756 GFSEGLWEIENNPTVK Unmodified 1818.8788 0.87882882 2314 B2RDE8;A0A384NPW1;P51858;A8K8G0;B7Z958;P51858-2;P51858-3 HDGF Hepatoma-derived growth factor yes no 0 0 0 4 0 1 62.213 62.218 3 1.1357E-25 19267 20230619_1883_Aki_TMTPro18x_K_F4 223.06 195.42 139810 117840 151200 157560 133140 187650 150300 152180 166210 182120 167460 176520 189050 167850 173670 184580 185560 224800 129390 108200 152460 156200 140480 186530 151110 158710 168630 182300 172780 179100 191580 174380 177600 187430 177690 212950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 315700000 9954 2314 9414 19026 15238 15238 1 9606 Homo sapiens 0.0021445556440085056 GFSEGTASTFDYSLK Unmodified 1608.7308 0.7307676 4140 Q709C8-4;Q709C8-2;Q709C8-3;Q709C8;Q6ZQY1 VPS13C Vacuolar protein sorting-associated protein 13C yes no 0 0 0 7 0 1 58.058 58.11 3 1.269E-05 17055 20230619_1887_Aki_TMTPro18x_K_F7 111.12 91.009 28522 24854 26342 30746 25770 27523 29614 27707 38801 33970 31164 34510 39099 31723 38882 40018 36810 36199 26368 22798 26957 30521 26928 28088 29912 28476 38706 34027 32712 34910 39634 33255 39433 39868 35235 34425 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20142000 9955 4140 9415 19027 15239 15239 1 9606 Homo sapiens -0.04924855689409924 GFSELSTLEVLPQVYNVR Unmodified 2050.0735 0.073505879 407 A0A024R6Q2;Q96FX7;Q96B39;H0Y2Q1 C14orf172;TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A yes no 0 0 0 8 0 1 63.984 64.006 3 6.2618E-24 19549 20230619_1888_Aki_TMTPro18x_K_F8 157.91 139.31 15144 14630 14512 15831 12025 15773 17113 17829 15067 18740 15204 18516 18934 15351 19366 23425 17458 20388 14014 13399 14771 15897 12836 16000 16902 18093 15495 18868 15789 18698 19220 16365 19604 23226 16743 19386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45458000 9956 407 9416 19028 15240 15240 1 9606 Homo sapiens 0.09047206649574946 GFSESER Unmodified 810.3508 0.35079637 4151 Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;Q53FN7;Q7L1Q6-2;C9IZ80;B3KU41;C9JFN4;C9J188;C9JWF5 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes no 0 0 0 1 0 1 32.374 32.374 2 0.005093 6945 20230619_1880_Aki_TMTPro18x_K_F1 143.56 100.51 23706 9741.6 26513 31077 26826 43519 30822 32690 44537 24134 33535 58985 45590 47337 27526 25262 70946 83050 21874 9113.3 26752 29731 28074 42724 31263 33931 44082 25957 35600 57786 45404 48078 30685 28972 67545 78225 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26344000 9957 4151 9417 19029 15241 15241 1 9606 Homo sapiens -0.06196499992847748 GFSIPECQK Unmodified 1064.4961 0.4960804 651 O75390;A0A024RB75;B4DJV2;B3KTN4;A0A0C4DGI3;F8W4S1;B7Z1E1;F8VPF9;F8VPA1;H0YH82;F8VTT8;F8W1S4;F8W642;F8VZK9;F8VRI6;F8VWQ5;F8VX68;F8VRP1;F8VX07 CS Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 7 0.816 1 1 1 49.339 49.417 3 5.9927E-05 13269 20230619_1888_Aki_TMTPro18x_K_F8 122.19 97.806 283840 237540 261570 284900 293220 293480 321930 327380 319480 334350 340660 311160 364960 282150 346720 360100 359760 312030 262330 217860 268170 284020 302570 297000 322900 332250 326610 336720 349450 316140 370630 296210 353660 357920 343760 297050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1589899999.9999998 9958 651 9418 19030;19031;19032 15242;15243;15244 15244 3 9606 Homo sapiens -0.033587801881594714 GFSLEELR Unmodified 949.4869 0.48689592 2040 Q6NZ55;A8K4C8;P26373;J3QSB4;P26373-2 RPL13 60S ribosomal protein L13 yes no 0 0 0 4.5 0.5 1 1 53.803 53.846 2 1.2576E-06 15725 20230619_1883_Aki_TMTPro18x_K_F4 195.6 138.5 2056800 1751400 1923600 2018400 1735000 2013700 2032900 2073100 1982200 2186900 2039000 1954400 2294700 1753800 2077000 2565400 2233000 2096900 1901400 1605600 1963000 2017100 1825700 2038200 2031900 2116800 2026200 2196200 2100300 1989200 2322300 1859100 2127200 2537300 2134100 1997100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6970199999.999999 9959 2040 9419 19033;19034 15245;15246 15245 2 9606 Homo sapiens 0.010131945177931811 GFSLLATEDK Unmodified 1079.5499 0.5498901 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9;Q05D33;Q6PJL0;Q96P95 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 6 0.816 1 1 1 56.802 56.865 3 4.0527E-07 16792 20230619_1886_Aki_TMTPro18x_K_F6 173.32 143.85 321780 260590 292030 334990 321300 371380 334210 326520 353790 382050 376280 372390 413680 347950 392070 422990 381880 393150 297290 239200 299840 332570 331950 371700 336890 338200 360490 382850 386680 377720 419910 363690 398680 422140 365560 373690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 820600000 9960 261 9420 19035;19036;19037 15247;15248;15249 15248 3 9606 Homo sapiens 0.013297155151803963 GFSLYTGSSGALSPGGPQAQIAPR Unmodified 2318.1655 0.16550878 4756 Q9Y6C2 EMILIN1 EMILIN-1 yes yes 0 0 0 4.5 0.5 1 1 58.616 58.645 3 2.8544E-103 17757 20230619_1883_Aki_TMTPro18x_K_F4 247.66 234.69 58751 48965 58125 57242 53103 64323 56483 60762 76546 73523 72089 88511 81407 80323 79439 85640 101630 122700 54327 44897 59017 57239 55730 64421 57403 62654 76687 74094 74701 88837 82805 83414 82075 88018 97170 116070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55308000 9961 4756 9421 19038;19039 15250;15251 15250 2 9606 Homo sapiens 0.05915264995974212 GFSSGSAVVSGGSR Unmodified 1253.6 0.60002819 2787 CON__P35908v2;CON__P35908;P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 0 0 0 4.5 3.5 1 1 39.423 39.41 2 8.829400000000001E-27 9817 20230619_1880_Aki_TMTPro18x_K_F1 207.95 201.64 + 3319.3 3737.5 6666.4 8601 242520 10025 0 7069.3 22075 2706.8 6794.1 4438.5 5571.8 68596 10785 1823.3 5537.7 5421.9 3102.1 3455.3 9634.2 8288.8 224660 10685 10650 7281.4 20681 3160.8 7619.6 6598.9 6407.4 64825 10536 3191.7 5348.3 5112.1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 11836000 9962 2787 9422 19040;19041 15252;15253 15252 2 9606 Homo sapiens -0.016627818269626005 GFSSTFTGER Unmodified 1087.4934 0.49343786 2238 B2R6J3;Q96EY8;F5H4Z7;A0A087X114;S4R3Z1 MMAB Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial yes no 0 0 0 6.5 0.5 1 1 44.379 44.467 2 5.8217E-07 11122 20230619_1887_Aki_TMTPro18x_K_F7 185.81 146.51 87553 65449 75456 93381 81399 90784 98539 103970 115670 96124 90969 94271 105270 85494 94369 103370 100550 100250 80821 60164 77867 91944 84590 92265 98871 105080 115860 97527 95151 95499 106450 89444 96541 103390 96139 95252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119490000 9963 2238 9423 19042;19043 15254 15254 1 9606 Homo sapiens -0.04680912321487085 GFTAAGVLAAHK Unmodified 1141.6244 0.62439245 540 P32322-3;P32322;A0A024R8U9;E7D7X9;P32322-2;A0A1B2JLU7;E7D7Y0;E2QRB3;J3KQ22;B7Z8T1;J3QL24;J3QL32;J3QL23;J3QLK9;J3QR88;J3QKT3;J3QRZ0;J3KTA8 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase yes no 0 0 0 3 0 1 48.79 48.868 3 0.00034712 13637 20230619_1882_Aki_TMTPro18x_K_F3 95.498 75.211 698190 666790 674280 597300 628100 811970 683890 642760 1087200 353070 361670 311240 388740 265200 478730 348320 413180 380230 646090 609750 685900 612370 659370 801020 698240 660680 1053300 372800 406200 316780 400050 279900 480850 350870 395740 360930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 510730000 9964 540 9424 19044 15255 15255 1 9606 Homo sapiens 0.05924523117209901 GFTESFGAANISQAAR Unmodified 1625.7798 0.77978347 3821 Q6AWA4;Q12789;Q6AHZ7;H3BU37 DKFZp686O0870;GTF3C1;DKFZp686A111 General transcription factor 3C polypeptide 1 yes no 0 0 0 8 0 1 52.871 52.946 2 0.0033098 14819 20230619_1888_Aki_TMTPro18x_K_F8 90.926 81.737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9965 3821 9425 19045 15256 15256 1 9606 Homo sapiens -0.008075226098071653 GFTGIDSEYEKPEAPELVLK Unmodified 2221.1154 0.11543027 3250 O43252;Q05BW9 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 1 6 1 1 1 60.902 60.949 3;4 0.00018576 18302 20230619_1885_Aki_TMTPro18x_K_F5 80.638 66.766 89896 100650 72067 113570 102350 127620 112560 110400 100790 142570 128500 131220 143540 129530 138400 166150 143870 160050 83179 92169 75435 113750 104300 127590 112520 114840 104680 141960 131250 133690 145820 135580 141290 165950 137720 152020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 436230000 9966 3250 9426 19046;19047 15257;15258 15257 2 9606 Homo sapiens 0.05371717547404842 GFTIPEAFR Unmodified 1036.5342 0.53418046 1305 A0A1U9X8Y4;Q5SRT3;Q53FB0;O00299 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 yes no 0 0 0 3.67 3.09 1 1 1 58.102 58.123 2 7.3136E-06 17700 20230619_1880_Aki_TMTPro18x_K_F1 179.21 117.85 853140 696350 703560 893420 790660 988690 984160 1044500 1097400 973950 818120 873110 1049500 814760 895230 1109600 739960 1004100 787720 639140 729900 887090 820870 993340 984290 1060900 1100600 985110 863110 889190 1055800 858310 905790 1103800 711320 953810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1264900000 9967 1305 9427 19048;19049;19050 15259;15260;15261 15259 3 9606 Homo sapiens 0.017374737888076197 GFTLNDAANSR Unmodified 1164.5523 0.55234972 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJA1;A0A804HKK7;A0A804HKX6 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 6 0.816 1 1 1 44.173 44.258 2 3.0602E-30 11320 20230619_1885_Aki_TMTPro18x_K_F5 269.01 232.03 467080 388280 453330 478340 457940 508830 533540 543500 574850 551640 650420 681990 651650 555520 616610 608810 696290 706500 431840 356210 461920 476170 477340 513000 534990 553090 586100 560930 664090 682060 663390 580080 631970 616470 665510 669970 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1496399999.9999998 9968 1723 9428 19051;19052;19053 15262;15263;15264;15265 15262 4 9606 Homo sapiens -0.023344360271494224 GFTVMNENER Unmodified 1195.5292 0.52917144 2732 C9J050;C9JEJ2;P49585;D3DXB2;B4E322;B2R8P1;H7C1T3;C9J2E1;C9JPY0 PCYT1A;hCG_2002711 Choline-phosphate cytidylyltransferase A yes no 0 0 0 3 0 1 43.77 43.84 2 0.00010374 11293 20230619_1882_Aki_TMTPro18x_K_F3 142.83 122.13 52720 42896 54247 57003 61571 77105 77457 71813 75144 79218 79820 78175 92620 69002 84445 81192 90484 92423 48759 39387 55137 56660 63838 76281 77081 73915 76904 79623 82240 79101 93666 72198 86324 82032 86530 87658 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35336000 9969 2732 9429 19054 15266 15266 1 9606 Homo sapiens -0.060771981361085636 GFVEFAAKPPAR Unmodified 1288.6928 0.69280637 2614 B4DWI8;Q8WXF1;A0A024RDP4;Q8WXF1-2;X6RDA4 PSPC1 Paraspeckle component 1 yes no 0 0 1 2.5 0.5 1 1 49.031 49.103 3 0.0011024 13720 20230619_1882_Aki_TMTPro18x_K_F3 90.434 60.89 662560 561360 613250 780110 694330 762640 721940 641790 738190 795970 812320 826020 869330 747700 828390 912710 905800 857910 612410 515620 629290 769080 715500 769680 726770 668680 754560 797140 832690 834610 883580 782450 847800 911290 865580 815600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 954770000 9970 2614 9430 19055;19056 15267 15267 1 9606 Homo sapiens 0.06000767697082665 GFVEIQTPK Unmodified 1017.5495 0.54949617 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 51.702 51.778 2 6.847E-05 14357 20230619_1887_Aki_TMTPro18x_K_F7 181.55 142.76 146700 116300 127600 134010 128060 144920 146530 149030 157530 169890 151790 166780 185870 152120 156360 197460 178150 177060 135470 106650 131260 134070 133550 145830 147040 152500 159780 170450 157600 168940 187200 159800 160950 196440 170230 168390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 442690000 9971 1207 9431 19057;19058 15268 15268 1 9606 Homo sapiens 0.04142340585997317 GFVEPDHYVVVGAQR Unmodified 1671.8369 0.83690442 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 5.5 0.5 1 1 48.229 48.307 3 1.1172E-42 13098 20230619_1886_Aki_TMTPro18x_K_F6 226.23 182.55 277460 219710 253660 239840 218510 243310 211080 207600 256100 220310 219990 180900 224030 176740 197960 233290 204990 188520 256330 201370 258980 240730 229710 245060 214800 214960 256880 220910 227300 185490 227190 185480 202340 230940 195950 179590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1717699999.9999998 9972 1817 9432 19059;19060 15269;15270 15270 2 9606 Homo sapiens 0.027859446665388532 GFVLQDTVEQLR Unmodified 1403.7409 0.74087877 2037 A8K492;P56192;B4DF61;B4E0E9;P56192-2;H0YHV5;H0YIC2 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 0 0 6 0 1 59.183 59.248 2 2.1596E-09 17798 20230619_1886_Aki_TMTPro18x_K_F6 214.82 178.24 104180 105020 128780 119460 106050 124640 138340 112680 118900 148910 146730 109250 121810 86707 185270 91421 85370 86771 96658 96205 128400 119580 112730 125400 137030 116970 123430 147280 148040 111930 127850 90549 181250 91860 82657 82459 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85249000 9973 2037 9433 19061 15271 15271 1 9606 Homo sapiens 0.05515796826443875 GFVQVDDGRK Unmodified 1119.5673 0.5672715 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 1 6 0.816 1 1 1 41.075 41.159 3 0.00010614 9992 20230619_1886_Aki_TMTPro18x_K_F6 134.57 107.16 649130 520120 585070 623230 720000 742990 721110 714720 861420 756280 815350 827250 853150 710710 728510 939550 896030 773340 599670 477100 601880 622560 737130 741760 731250 733160 867610 764470 840330 832990 863710 748770 753370 930630 854840 736730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 722230000 9974 3650 9434 19062;19063;19064 15272;15273;15274 15273 3 9606 Homo sapiens 0.012270558408545185 GFVTGGADK Unmodified 850.41848 0.418482 4064 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 WDR3 WD repeat-containing protein 3 yes no 0 0 0 6.5 0.5 1 1 43.395 43.482 2 0.0014396 10724 20230619_1887_Aki_TMTPro18x_K_F7 128.36 74.204 54590 39859 53615 59833 64618 67668 66238 64613 88035 67355 71735 72201 81206 58742 68625 75280 86762 83028 50437 36666 54749 58856 66299 67747 67340 66298 87750 68115 74771 72633 81937 61974 71036 75793 82812 78792 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95780000 9975 4064 9435 19065;19066 15275 15275 1 9606 Homo sapiens -0.012710500620528364 GFVVINQK Unmodified 903.5178 0.51780212 765;2549;4294 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2;B4DN39;Q92526;Q92526-2;Q92526-3 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 no no 0 0 0 2.5 0.5 1 1 50.588 50.65 2 1.0502E-06 14730 20230619_1881_Aki_TMTPro18x_K_F2 199.4 109.49 1002000 803280 897290 966750 963850 1118300 1027900 1019100 1159400 1123600 1176600 1133000 1341900 1011900 1060300 1371400 1252100 1217100 925600 736870 921690 964890 998400 1117000 1036900 1050700 1174600 1130400 1213000 1146400 1350100 1067200 1095500 1362800 1195900 1157800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1519499999.9999998 9976 765;2549;4294 9436 19067;19068 15276;15277 15276 2 9606 Homo sapiens 0.06218392622713509 GFYDPPR Unmodified 850.39735 0.39735263 44 Q53F48;A0A024QZK8;P31942-2;P31942;P31942-3 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes no 0 0 0 5.5 0.5 1 1 41.449 41.538 2 0.049733 10167 20230619_1885_Aki_TMTPro18x_K_F5 86.344 32.878 115250 88333 108690 124740 143080 137520 132790 131030 142690 136740 162430 169950 173290 146850 135480 168820 179740 178050 106470 81181 111540 123100 145470 137960 134810 134490 145600 138910 166220 170260 174750 153400 141050 169720 171530 169020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182260000 9977 44 9437 19069;19070 15278 15278 1 9606 Homo sapiens -0.03383015370911835 GFYDPPRR Unmodified 1006.4985 0.49846366 44 Q53F48;A0A024QZK8;P31942-2;P31942;P31942-3 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes no 0 0 1 4.5 3.04 1 1 1 1 35.257 35.286 3 0.011376 7920 20230619_1880_Aki_TMTPro18x_K_F1 75.854 23.859 144160 107830 154410 159270 188480 188170 182950 189740 180350 177420 213580 195230 196400 163790 200940 186110 208870 190610 133310 99163 156530 156960 192700 188100 184770 193360 185180 180470 216740 196410 201170 171180 204590 186990 199640 181060 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 584650000 9978 44 9438 19071;19072;19073;19074 15279;15280;15281 15279 3 9606 Homo sapiens -0.004525636681933065 GFYEALFDGHPPGK Unmodified 1533.7252 0.72522871 2288 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;A0A8C8L741;E9PQR8 EEF1D Elongation factor 1-delta yes no 0 0 0 8 0 1 59.416 59.457 3 0.001144 17575 20230619_1888_Aki_TMTPro18x_K_F8 78.486 64.228 113040 103720 116670 140800 63600 68901 92938 81367 85183 122090 122490 115650 122570 105290 118580 141420 124600 139350 104630 95217 117540 138170 70991 75446 91879 83531 88833 120920 123890 117390 124900 110870 121120 141340 119260 132320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45776000 9979 2288 9439 19075 15282 15282 1 9606 Homo sapiens -0.02028489690587776 GFYEGIMLVDGFK Unmodified 1474.7166 0.71663786 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRU9 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 64.427 64.452 3 4.6565E-05 19791 20230619_1888_Aki_TMTPro18x_K_F8 93.011 79.607 29997 22008 29860 34113 19964 29413 26487 28106 29269 26471 36095 35568 36380 32573 37261 42739 38677 47915 27718 20252 30226 33374 21755 30036 26444 28780 29902 27122 36729 35635 37172 34231 37987 43053 37056 45421 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110570000 9980 1603 9440 19076;19077 15283 15283 1 9606 Homo sapiens -0.0017317965143774927 GFYIYQEGVK Unmodified 1202.5972 0.59717465 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 6 2.92 1 1 2 55.757 55.803 2;3 2.7703E-05 16037 20230619_1888_Aki_TMTPro18x_K_F8 177.36 137.01 292680 261480 294790 324080 331040 379000 383250 392030 385840 342480 333970 286200 312270 256380 390470 347060 322510 287470 270800 239840 300080 322880 342380 379300 383440 398150 390770 347060 344060 292360 323000 270250 391690 344140 308990 273800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 867520000 9981 2908 9441 19078;19079;19080;19081 15284;15285;15286 15286 3 9606 Homo sapiens 0.0039799478618078865 GGAAPEGPNEAEVTSGKPEQEVPDAEEEK Unmodified 2950.3316 0.33158365 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;Q6PJY7;E9PPR5 NASP Nuclear autoantigenic sperm protein yes no 0 0 1 2.5 1.12 1 1 1 1 46.646 46.696 4 7.5294E-14 12895 20230619_1881_Aki_TMTPro18x_K_F2 128.89 120.92 74063 52484 64317 69611 78822 91487 70435 70018 74269 85519 83885 82318 87325 72824 82385 91629 87515 85955 68352 48217 66394 69146 80562 90340 71646 73418 75918 85497 85762 83399 88767 76431 84196 91437 83673 81706 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 551150000 9982 3605 9442 19082;19083;19084;19085 15287;15288 15288 2 9606 Homo sapiens -0.06556887658007327 GGAEQFMEETER Oxidation (M) 1398.5722 0.57215846 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 1 0 1.5 0.5 1 1 38.491 38.523 2 0.00062407 9299 20230619_1880_Aki_TMTPro18x_K_F1 96.756 90.372 110910 98846 89392 104310 122670 121430 114980 112430 114410 123030 134150 133630 140580 123270 129110 145290 136340 134980 102450 90529 93171 105140 124500 121370 116360 115770 117450 124080 137000 134870 142740 128620 131980 145040 130370 128320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308120000 9983 4005 9443 19086;19087 15289 15289 2637 1 9606 Homo sapiens -0.11118472869384277 GGAEQFMEETER Unmodified 1382.5772 0.57724384 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 1.5 0.5 1 1 46.596 46.636 2 1.812E-17 12934 20230619_1880_Aki_TMTPro18x_K_F1 228.39 210.13 302470 254620 268720 292760 238820 303160 288490 270570 325870 353840 337470 350390 396200 308810 324120 401490 368920 379830 279480 233420 275520 292690 252200 305010 289200 280990 330570 353030 348310 354450 398910 324930 333750 400530 352620 360960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1594699999.9999998 9984 4005 9443 19088;19089 15290;15291 15290 2 9606 Homo sapiens -0.09874169006752709 GGAESHTFK Unmodified 932.43519 0.4351947 3616 P50238;K4DIB9;H3BRQ4 CRIP1 Cysteine-rich protein 1 yes no 0 0 0 5 0 1 33.281 33.366 3 0.00014138 6931 20230619_1885_Aki_TMTPro18x_K_F5 117.81 71.148 69511 36757 86964 64475 97825 103660 137800 161170 141590 129690 230160 215860 166840 179170 173790 79444 236470 180800 64267 33936 86968 63431 101690 103090 136810 159670 147220 135290 229100 213880 172870 180670 179490 87476 225260 170860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48350000 9985 3616 9444 19090 15292 15292 1 9606 Homo sapiens -0.033725491761060766 GGAEVQIFAPDVPQMHVIDHTK Oxidation (M) 2404.1845 0.18452967 987 P0DPI2-2;A0A0B4J2D5-2;P0DPI2;A0A140VKB0;A0A0B4J2D5;A0A2R8Y6K9;A0A2R8YDR7;F2Z2Q0;A0A096LP12 C21orf33 yes no 0 1 0 6 0 1 49.986 50.063 4 6.0969E-08 13925 20230619_1886_Aki_TMTPro18x_K_F6 102.6 90.298 49425 43080 40842 54407 47631 51786 62678 50690 56285 53388 64230 66587 63593 48568 55716 76591 66351 76810 45655 39525 42400 53960 49322 52544 62087 51993 57988 54204 65517 66432 64519 52190 57503 76453 63454 72914 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140840000 9986 987 9445 19091 15293 15293 561 1 9606 Homo sapiens 0.03860478295291614 GGAGGTDGQGGTFR Unmodified 1236.5483 0.54832698 4019 Q9UDY4;Q59E89;C9JUL4 DNAJB4 DnaJ homolog subfamily B member 4 yes no 0 0 0 4 0 1 32.089 32.15 2 0.0026225 6390 20230619_1883_Aki_TMTPro18x_K_F4 85.355 68.781 4953.5 3450.5 6100.4 5770.1 16444 20079 8367 11284 11384 9073.7 12133 12210 10017 10828 10087 5909.5 15378 13174 4584.9 3179.1 6256.8 5810.6 16065 19001 9001.5 12053 11455 9396.1 12320 12197 10315 10954 10523 6439.3 14647 12444 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7421200 9987 4019 9446 19092 15294 15294 1 9606 Homo sapiens -0.06048525520873227 GGAGVGSMTK Oxidation (M) 879.41202 0.41201641 2186 B0ZBD0;Q8WVX7;P39019 RPS19 40S ribosomal protein S19 yes no 0 1 0 7 0.816 1 1 1 33.392 33.433 2 0.0013223 6651 20230619_1887_Aki_TMTPro18x_K_F7 102.62 62.554 55424 28601 69791 69999 102730 113420 73466 103310 81606 55457 83237 96343 81850 72910 90963 30518 98567 92325 51241 26557 70189 67773 103280 111050 76117 104850 82660 59861 85385 95050 84032 73795 92405 35016 94191 87059 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 75976000 9988 2186 9447 19093;19094;19095 15295;15296;15297 15296 1359 3 9606 Homo sapiens -0.03251311285066549 GGAGVGSMTK Unmodified 863.4171 0.41710179 2186 B0ZBD0;Q8WVX7;P39019 RPS19 40S ribosomal protein S19 yes no 0 0 0 7.5 0.5 1 1 39.396 39.421 2 0.00026266 9214 20230619_1888_Aki_TMTPro18x_K_F8 134.66 86.097 106620 57528 148150 132750 192970 232410 155330 199550 189830 124590 179260 200640 179050 157790 176820 79881 228350 191730 98694 53344 147650 129050 195980 226440 160000 203930 190780 132330 184570 198590 182720 160160 182110 88129 217730 181060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 214120000 9989 2186 9447 19096;19097 15298;15299 15299 2 9606 Homo sapiens -0.020070074224577183 GGAHDYYNVLPNK Unmodified 1446.6892 0.68917755 4215 Q8IYS1 PM20D2 Peptidase M20 domain-containing protein 2 yes yes 0 0 0 8 0 1 45.965 46.004 3 0.00030829 11858 20230619_1888_Aki_TMTPro18x_K_F8 94.538 81.912 71880 66485 70569 66553 66224 75102 69996 64861 73272 83923 85872 95802 93784 81805 81365 113730 105030 103650 66510 60857 71702 67368 69246 75102 70490 67503 75029 84143 87923 96256 94914 86497 84441 113110 100250 98559 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159600000 9990 4215 9448 19098 15300 15300 1 9606 Homo sapiens -0.016299468674333184 GGAPAEGEGAAETLPEASR Unmodified 1768.8228 0.8227705 4759 Q9Y6K1;Q59HC6;F8WE91;Q9Y6K1-3 DNMT3A DNA (cytosine-5)-methyltransferase 3A yes no 0 0 0 1 0 1 41.318 41.318 3 1.3759E-49 10642 20230619_1880_Aki_TMTPro18x_K_F1 218.66 201.26 55757 41693 61402 64379 75193 75778 66109 67197 70892 63283 74402 82791 75915 69021 64529 64428 82421 79600 51572 38363 62118 63266 76694 75555 67354 69148 72082 64770 76287 82653 76932 71395 66800 65680 78667 75454 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45793000 9991 4759 9449 19099 15301;15302 15301 2 9606 Homo sapiens -0.030887973430480997 GGCPGGEATLSQPPPR Unmodified 1579.7413 0.74128948 3480 P20290 BTF3 Transcription factor BTF3 yes yes 0 0 0 4.5 0.5 1 1 37.612 37.68 3 2.4938999999999997E-19 8567 20230619_1883_Aki_TMTPro18x_K_F4 203.32 195.45 27354 26632 28511 33311 37314 40190 35807 32613 38483 37631 48465 45293 47638 39898 37877 40634 109040 40861 25333 24423 29029 33168 38007 39948 36271 33990 39439 38006 49184 45461 48270 41369 42592 40835 103170 39057 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 257120000 9992 3480 9450 19100;19101 15303;15304 15303 2 9606 Homo sapiens -0.02539151515998128 GGCVDSTNQSLALLLMTLGQQDVSK Unmodified 2634.2993 0.29930143 4708 Q9Y2P8;Q5VZU2;Q5VZU3;Q9Y2P8-2 RCL1 RNA 3'-terminal phosphate cyclase-like protein yes no 0 0 0 2 0 1 65.943 65.95 3 4.5113E-20 21205 20230619_1881_Aki_TMTPro18x_K_F2 161.66 154.21 4920.6 5343.6 4369.9 3760.2 5321.5 5258.4 6850.2 6307.4 4543.9 4166 3647.8 5162 6781.8 5657.2 6284.5 6461.7 4639.1 3884.4 4555 4876.9 4496.8 3957.5 5482 5234.7 6743.9 6312.8 4727.8 4208.8 3937.2 5212.9 6796 5856.6 6308.9 6338.1 4449.3 3719.5 2 2 2 2 2 2 2 2 2 1 2 2 2 2 2 2 2 2 11483000 9993 4708 9451 19102 15305;15306 15305 2 9606 Homo sapiens 0.04752374924282776 GGDAPAAGEDA Unmodified 929.37265 0.37265402 3727 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 0 1 0 1 34.226 34.226 2 0.029841 7668 20230619_1880_Aki_TMTPro18x_K_F1 65.465 55.827 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9994 3727 9452 19103 15307 15307 1 9606 Homo sapiens -0.09485740034949686 GGDCLTSQTR Unmodified 1093.4822 0.48222124 1712 Q8IXB1;Q8IXB1-2;A0A7P0TAQ9;A0A7P0Z431;B3KNK5;B4DP04;Q8IXB1-3;A0A7P0Z4F2;A0A494C1G5;H7C1G0;Q6YPB0 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 4 0 1 32.194 32.255 2 0.0014765 6432 20230619_1883_Aki_TMTPro18x_K_F4 111.46 94.491 11799 6894.7 10813 9932.7 15573 13901 13903 15445 10448 12660 17817 20132 16042 14451 14048 8603.4 20909 20403 10883 6345.9 11129 9835.9 15720 13794 14019 15590 11137 13155 17871 19883 16341 14795 14666 9418.7 19936 19256 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11375000 9995 1712 9453 19104 15308 15308 1 9606 Homo sapiens -0.06078057687273031 GGDISVCEWYQR Unmodified 1468.6405 0.6405128 3453 P14854 COX6B1 Cytochrome c oxidase subunit 6B1 yes yes 0 0 0 4.5 0.5 1 1 52.322 52.37 2 3.1903E-18 15087 20230619_1883_Aki_TMTPro18x_K_F4 240.38 228.33 147360 152230 186860 199920 206520 235700 251130 248280 256930 179810 192350 190620 235620 194300 172240 206210 204880 207370 136780 139650 186980 198440 214030 235830 250720 250920 258610 185850 202240 193270 236090 200970 178240 207020 195730 196940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 379770000 9996 3453 9454 19105;19106 15309;15310 15309 2 9606 Homo sapiens -0.07506183498844621 GGDLMAYDR Oxidation (M) 1012.4284 0.42839476 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;B3KU16 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 1 0 2.5 0.5 1 1 38.241 38.299 2 0.0041365 8855 20230619_1882_Aki_TMTPro18x_K_F3 93.429 59.878 230300 170940 192200 224950 268940 277040 257520 243810 304210 250020 285210 270770 272410 230160 252410 303540 300810 263370 212540 156990 199760 223330 272960 275440 261650 251570 306340 253120 292840 272740 277530 242560 259960 301470 287090 250720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1090500000 9997 1865 9455 19107;19108 15311;15312 15312 1196 2 9606 Homo sapiens -0.07732230118972439 GGDLMAYDRR Oxidation (M) 1168.5295 0.52950579 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;B3KU16 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 1 1 4 0.816 1 1 1 33.985 34.053 3 0.046019 7151 20230619_1885_Aki_TMTPro18x_K_F5 80.763 54.249 418810 361210 383070 418930 550230 512300 475560 484060 523760 367180 426850 366870 406780 324180 436780 403910 449370 361480 387120 331140 394710 419600 555650 510590 485240 493270 526580 377610 441360 371450 417140 340070 444090 402390 429220 344100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1173900000 9998 1865 9456 19109;19110;19111 15313;15314 15314 1196 2 9606 Homo sapiens -0.048017784162766475 GGDLMAYDRR Unmodified 1152.5346 0.53459117 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;B3KU16 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 1 5 0.816 1 1 1 38.413 38.486 3 3.9655E-07 8876 20230619_1885_Aki_TMTPro18x_K_F5 151.22 115.99 501630 416200 434920 425870 489520 556640 508130 554130 574910 401180 444440 362660 432140 341130 462540 481330 471260 368450 463370 381180 448140 431330 505000 552970 513380 561870 576140 412740 461190 369890 442790 359980 470360 475110 450110 351530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 719180000 9999 1865 9456 19112;19113;19114 15315;15316;15317 15316 3 9606 Homo sapiens -0.035574745536678165 GGDPALIR Unmodified 797.43955 0.43955179 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 0 3.5 0.5 1 1 38.487 38.535 2 0.0026438 9002 20230619_1882_Aki_TMTPro18x_K_F3 123.45 69.896 310120 229200 244740 291040 302190 320640 310140 313900 394900 274900 337950 398310 368760 331910 403950 407520 445410 457720 286090 210430 255180 289170 309750 321840 314780 320180 394810 283880 351310 396570 377290 348450 412440 411100 425850 434170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 632420000 10000 3609 9457 19115;19116 15318;15319 15318 2 9606 Homo sapiens 0.032729600374864276 GGDPFWDGPGDPMR Unmodified 1502.6249 0.62486274 3960 Q96QC0;Q2L6I0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes no 0 0 0 3 0 1 57.657 57.689 2 0.00019345 17474 20230619_1882_Aki_TMTPro18x_K_F3 97.734 74.855 56220 42332 48100 54809 44243 58756 52412 57683 66076 61078 55519 58146 66803 57066 62379 67745 67925 71364 51897 38870 49530 54369 46601 59057 52809 59078 66134 61472 57978 59128 67624 59479 63844 68093 64960 67731 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29383000 10001 3960 9458 19117 15320;15321 15321 2 9606 Homo sapiens -0.1063447001588429 GGDSIGETPTPGASK Unmodified 1372.647 0.64703797 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 0 3 0.816 1 1 1 41.901 41.962 3 5.0814E-08 10332 20230619_1883_Aki_TMTPro18x_K_F4 117.77 109.17 223910 149190 178320 205980 225240 251650 214600 216290 307330 244590 297570 288730 295460 237180 244660 275840 298010 291650 206460 137160 185800 203840 230280 250130 219820 224170 307200 247180 305510 289430 299140 248460 252790 277380 284570 276870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1332300000 10002 3309 9459 19118;19119;19120 15322;15323 15323 2 9606 Homo sapiens -0.024379670664757214 GGEADNLDEFLK Unmodified 1306.6041 0.60411052 577 A0A024R9J0;O60216;A0A8I5KWV3 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 0 0 2.5 0.5 1 1 58.762 58.783 3 3.1776E-08 17926 20230619_1882_Aki_TMTPro18x_K_F3 168.85 145.61 175980 146450 166360 182390 137890 191040 170970 172850 197820 193130 190700 201920 200840 175170 174910 219960 207290 231510 162670 134370 169500 181340 146730 192010 171360 178420 199740 194380 196490 203680 203490 183950 180370 220820 198180 219680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 478120000 10003 577 9460 19121;19122 15324;15325 15325 2 9606 Homo sapiens -0.03692737123924417 GGEDLRQDQR Unmodified 1172.5534 0.55341235 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 1 0 1 27.236 27.236 3 0.0033627 4912 20230619_1880_Aki_TMTPro18x_K_F1 78.556 50.814 6569.7 6084.4 11985 8876.9 17495 14413 12509 13760 8273.4 7376.5 10705 9435.2 8514.4 7441.8 12460 3345 12439 10578 6121.3 5590.1 11782 8811.5 17536 14146 12782 13923 8765.9 7854.2 10776 9415.9 8946.3 7536.1 12546 3861.7 11889 9977.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11204000 10004 3758 9461 19123 15326 15326 1 9606 Homo sapiens -0.025962216582456676 GGEIQPVSVK Unmodified 1012.5553 0.55530983 1453 A0A384N6A4;P61604;Q9UNM1;B8ZZL8;A0A024R3X7;B8ZZ54 HSPE1;EPFP1 10 kDa heat shock protein, mitochondrial yes no 0 0 0 6.29 1.03 2 2 2 1 44.811 44.887 2;3 1.1921E-05 11571 20230619_1885_Aki_TMTPro18x_K_F5 164.66 110.89 1059900 766300 844930 1033300 1146800 1298300 1091000 1198700 1525200 1207800 1263800 1375600 1546000 1419400 728950 2251700 953240 1461000 977670 704060 881920 1024600 1167400 1290100 1116500 1231300 1518300 1226300 1320700 1392600 1531000 1504600 776850 2200500 913400 1394100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 14182000000 10005 1453 9462 19124;19125;19126;19127;19128;19129;19130 15327;15328;15329 15327 3 9606 Homo sapiens 0.04953439097664614 GGELVYTDSEAR Unmodified 1295.5994 0.59935949 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0 PLEC;PLEC1 Plectin yes no 0 0 0 1.5 0.5 1 1 41.944 41.984 2 4.1021E-09 10963 20230619_1880_Aki_TMTPro18x_K_F1 170.89 146.51 43382 41983 46725 52726 58163 60960 67707 64424 70854 75456 76221 77881 82446 65971 70248 78579 76929 74294 40185 38502 47408 52472 59714 61104 67789 65865 72253 75721 78230 78537 83336 69121 72060 78507 73522 70620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80424000 10006 3921 9463 19131;19132 15330 15330 1 9606 Homo sapiens -0.036616212667013315 GGFAETGDHSR Unmodified 1132.4897 0.48974946 2069 A8K5C3;Q9NW75-2;Q9NW75;Q6PIX0 GPATCH2;GPATC2 G patch domain-containing protein 2 yes no 0 0 0 2 0 1 29.061 29.133 3 1.9647E-09 5407 20230619_1881_Aki_TMTPro18x_K_F2 159.94 140.69 9635.5 8397.2 11133 10852 12666 12113 11402 12335 12131 14105 13489 12961 15660 11216 13613 12933 16102 11928 8924.8 7706.2 11203 10776 12982 12163 11600 12628 12389 14119 13867 13148 15803 11728 14009 12918 15354 11355 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13147000 10007 2069 9464 19133 15331 15331 1 9606 Homo sapiens -0.07119582095333499 GGFCNFMHLKPISR Oxidation (M) 1678.8072 0.80720097 3777 Q01081;Q01081-2;Q7Z780;Q01081-4 U2AF1 Splicing factor U2AF 35 kDa subunit yes no 0 1 1 6 0 1 46.252 46.335 4 0.0070922 12289 20230619_1886_Aki_TMTPro18x_K_F6 72.898 65.859 250020 263240 290090 267350 303540 272190 279660 285490 319910 326650 327750 262020 311960 237840 313040 282190 285370 285460 231900 240890 291300 269980 313010 275520 284760 291780 324090 325910 334800 268250 318670 248700 316610 283170 273310 271090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 197510000 10008 3777 9465 19134 15332;15333 15333 2465 2 9606 Homo sapiens -0.005050338748105787 GGFLPPEEIK Unmodified 1085.5757 0.57571092 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 0 0 5 0 1 54.826 54.893 2 0.0054082 15751 20230619_1885_Aki_TMTPro18x_K_F5 89.355 60.956 54083 45838 61734 65345 51885 64904 65634 57812 76194 74949 77313 74213 87476 69045 69031 82185 96062 86668 50079 42115 61963 64359 55088 65472 65707 60048 77075 74827 79676 75211 88070 72126 72077 82589 91585 82305 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36106000 10009 2350 9466 19135 15334 15334 1 9606 Homo sapiens 0.036346097574551095 GGFNTFR Unmodified 797.38204 0.38203692 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 1.5 0.5 1 1 41.369 41.408 2 0.067817 10449 20230619_1881_Aki_TMTPro18x_K_F2 78.178 50.653 114010 111010 124140 131240 141270 160930 157340 130490 168150 101300 109950 90780 100160 80098 136470 108600 113450 90767 105620 101750 125590 131250 145810 159780 157920 134720 168140 103780 115090 92403 104230 84489 136700 107780 108610 86483 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82338000 10010 3137 9467 19136;19137 15335 15335 1 9606 Homo sapiens -0.02475882168107546 GGFSFGNVEPASLPSASVFVLGR Unmodified 2294.1695 0.16953153 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 4 0 1 64.57 64.579 3 2.4393E-08 20262 20230619_1883_Aki_TMTPro18x_K_F4 100.64 88.87 8810.9 5150.1 6326.7 6745.4 6952.1 5913.3 7573.7 8311.1 6445.9 8101.4 8953.5 8186.2 8529.1 7624.8 8119.6 9260.6 8870.4 11377 8113.6 4735.1 6642.9 6673.2 7176.8 6101.7 7570.7 8316.8 6736.5 8193.6 9046 8293.7 8700.5 7973 8312.6 9393.4 8497.2 10775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37572000 10011 68 9468 19138 15336 15336 1 9606 Homo sapiens 0.07421354489633814 GGGAGGSSVGTGGGGTGGVGGGAGSEDSGDR Unmodified 2393.0076 0.0075641716 1303 B4DVB5;A0A1U9X8F2;A0A1U9X8F1;Q06587;A0A024RCR9;B4DW57;Q06587-2 RING1 E3 ubiquitin-protein ligase RING1 yes no 0 0 0 2 0 1 33.791 33.848 3 7.455E-142 7217 20230619_1881_Aki_TMTPro18x_K_F2 260.47 256.74 8987.8 5470.8 10372 9505.3 9774.3 15192 11042 11735 15241 14331 13882 12872 16258 15660 9543.4 11417 17735 16399 8308.1 5046.4 10413 9335 10272 14832 11192 12287 15237 14312 14393 13221 16219 15841 10283 11817 16880 15528 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15569000 10012 1303 9469 19139 15337;15338 15338 2 9606 Homo sapiens -0.13321930791926206 GGGALSAVAATK Unmodified 1001.5506 0.55055881 1672 A0A7P0PJI2;A0A7I2V5K0;P61011;G3V4F7;G3V480;B4DDS7;P61011-2;A0A7I2V584 SRP54 Signal recognition particle 54 kDa protein yes no 0 0 0 1.5 0.5 1 1 46.338 46.338 2 3.0658E-07 12729 20230619_1881_Aki_TMTPro18x_K_F2 155.15 100.6 61179 49549 51524 60714 59846 69877 64654 57286 71955 69530 68881 64498 76384 54405 67646 75385 75636 64105 56493 45458 53332 60497 61691 69672 65112 59744 72787 69479 71116 65388 77239 57599 69419 74767 72211 61049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50179000 10013 1672 9470 19140;19141 15339;15340 15340 2 9606 Homo sapiens 0.049845549548990675 GGGDLPNSQEALQK Unmodified 1412.6896 0.68957148 3364 V9HW53;O95865 HEL-S-277;DDAH2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes no 0 0 0 4 0 1 45.159 45.203 2 7.3296E-05 11826 20230619_1883_Aki_TMTPro18x_K_F4 131.37 94.177 15584 12122 14342 13347 20083 23076 23474 20343 26953 20122 29703 30774 25528 22326 23405 22479 28897 30850 14396 11112 14761 13511 20507 22531 23561 20967 27325 20683 30167 30467 26092 23318 24135 23059 27609 29206 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25666000 10014 3364 9471 19142 15341 15341 1 9606 Homo sapiens -0.0002657193824688875 GGGDMAVVVSK Unmodified 1018.5117 0.51173046 2375 Q5SZR4;B3KPI5;B4DZR8;Q9Y2W6-3;Q9Y2W6;B4DJ68 TDRKH Tudor and KH domain-containing protein yes no 0 0 0 6 0 2 47.303 47.384 2 0.0032722 12744 20230619_1886_Aki_TMTPro18x_K_F6 91.584 36.034 22206 17560 21117 27666 27244 33258 31045 32580 35952 30730 35207 33093 36964 30674 32103 31425 33408 42026 20521 16157 21684 27158 27945 33164 31225 33273 36298 31238 36217 33415 37430 31783 32800 32162 32012 39772 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13431000 10015 2375 9472 19143;19144 15342;15343 15342 2 9606 Homo sapiens 0.0032150632888487962 GGGDRYEDRYDR Unmodified 1457.6284 0.62836821 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;F8VX11;F8VP89 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 2 1.5 0.5 1 1 27.258 27.297 4 1.0751E-06 4960 20230619_1880_Aki_TMTPro18x_K_F1 147.33 128.75 30853 23177 30472 30191 30352 34181 30665 28281 36829 43871 43706 45126 45593 39114 39589 54467 53776 43960 28512 21284 30981 29962 31559 34127 31102 29723 37484 43537 44605 45557 46204 41336 41224 53857 51247 41901 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30765000 10016 2578 9473 19145;19146 15344 15344 1 9606 Homo sapiens -0.08214083917687276 GGGELGLQWHADGR Unmodified 1451.6906 0.69057454 3975 Q4J6C6-4;Q4J6C6-2;Q4J6C6-3;Q4J6C6 PREPL Prolyl endopeptidase-like yes no 0 0 0 4.5 0.5 1 1 45.052 45.113 3 1.1506E-08 11688 20230619_1885_Aki_TMTPro18x_K_F5 132.05 106.61 168360 150730 169270 188130 177100 174460 175790 153720 187110 199770 221410 215780 205880 184540 188610 197110 233520 227550 155780 138260 172070 186710 183120 177070 177700 159860 191400 199910 224830 217230 209880 192060 194610 199570 222950 215820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117560000 10017 3975 9474 19147;19148 15345;15346 15346 2 9606 Homo sapiens -0.017203127786842742 GGGEQETQELASK Unmodified 1332.6157 0.61573784 4390 Q96QR8 PURB Transcriptional activator protein Pur-beta yes yes 0 0 0 2 0 1 40.959 41.033 3 7.8139E-08 10280 20230619_1881_Aki_TMTPro18x_K_F2 150.49 136.23 83461 49832 85121 97485 128330 135750 111990 113730 142760 105000 122680 123810 120160 102910 116350 83427 136700 129190 77057 46052 87056 94913 129440 133780 114770 117460 142780 107240 126720 124050 122560 105870 119310 86829 130550 122250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116880000 10018 4390 9475 19149 15347 15347 1 9606 Homo sapiens -0.03726540100569764 GGGEVIVR Unmodified 785.43955 0.43955179 2123 A8K8K1;O00442;O00442-2 RTCA RNA 3'-terminal phosphate cyclase yes no 0 0 0 3.5 0.5 1 1 34.856 34.912 2 0.011898 7543 20230619_1882_Aki_TMTPro18x_K_F3 96.253 18.579 125170 77180 114100 128100 160770 152710 144710 154190 188770 138930 163410 167960 170620 133580 147270 115830 191470 172560 115480 71144 117580 125430 162770 152570 148170 156980 188660 142180 169170 167930 172770 138110 152410 119970 182640 163370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 90436000 10019 2123 9476 19150;19151 15348;15349 15348 2 9606 Homo sapiens 0.03824960037468372 GGGFEQEAHYPQWR Unmodified 1660.7383 0.73825301 2642 B4E0V7;Q53EW4;Q96QG7;Q96QG7-2 MTMR9 Myotubularin-related protein 9 yes no 0 0 0 5 0 1 44.72 44.798 3 5.8248E-07 11547 20230619_1885_Aki_TMTPro18x_K_F5 116.19 108.99 31683 23744 28756 31685 30481 34976 31785 30558 37429 35015 38655 33681 42411 36421 36355 41634 41147 36156 29258 21810 29498 31379 31584 35011 32150 31649 37857 35128 39729 34379 42882 37747 37366 41438 39288 34418 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21810000 10020 2642 9477 19152 15350 15350 1 9606 Homo sapiens -0.06568658578498798 GGGFGDRDR Unmodified 935.42094 0.42094162 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 1 2.5 0.5 1 1 23.19 23.302 3 0.00070198 3879 20230619_1881_Aki_TMTPro18x_K_F2 112.11 77.854 216800 112930 267760 289210 287900 340470 287190 307270 337440 257990 380110 390230 332320 265650 344220 148840 431110 346310 200410 104950 268230 277860 297520 339190 291310 314920 342130 267450 385990 385550 341160 272260 353440 163180 411060 327140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 346000000 10021 1328 9478 19153;19154 15351 15351 1 9606 Homo sapiens -0.04935201604382655 GGGFGGNDNFGR Unmodified 1153.4901 0.49008381 640;1673 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;A0A7I2V3W0;Q6IPF2;Q9BSM5;Q0VAC0;A0A7I2V2L6;A0A7I2YQX9;B4E0B5;A0A2R8Y4L2;H0YH80;Q3MI39;A0A7I2V2R4;A0A7I2V3K5;A0A7I2V661;A0A7I2V453;A0A7I2V5L7 HNRNPA1;HNRPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed no no 0 0 0 5 0.816 1 1 1 40.874 40.948 2 1.5242E-09 9897 20230619_1885_Aki_TMTPro18x_K_F5 185.61 131.86 450310 354420 372910 457900 330430 402420 381860 370520 495730 419820 471590 435530 509920 396700 329590 538580 542100 438010 415700 325380 385120 453050 348670 410340 385620 382320 497330 422360 486110 440520 510620 417980 351170 532700 515900 417470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 571200000 10022 640;1673 9479 19155;19156;19157 15352;15353;15354 15353 3 9606 Homo sapiens -0.08052162375474836 GGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEK Oxidation (M) 3388.3797 0.37973241 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-4;B3KPV0 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 1 0 1 0 1 50.244 50.244 4 1.2158E-17 14451 20230619_1880_Aki_TMTPro18x_K_F1 141.78 139.02 25510 21467 23302 27138 24328 24445 28327 26502 22126 28521 29181 25637 31692 24352 26051 31892 26833 31419 23576 19698 23893 26904 25261 24979 28145 26997 23204 28610 29694 26136 31973 25577 26668 31882 25698 29830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98693000 10023 33 9480 19158 15355 15355 11 1 9606 Homo sapiens -0.2189222659094412 GGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEK Unmodified 3372.3848 0.38481779 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-4;B3KPV0 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 0 1 0 1 52.544 52.544 4 4.6084E-06 15381 20230619_1880_Aki_TMTPro18x_K_F1 73.657 71.433 11383 8919.9 10197 10388 8683.4 10317 8810.3 10309 11808 12039 12867 12486 14699 10491 13597 13698 12926 14322 10514 8180.5 10434 10373 9157.8 10439 8979.1 10576 11905 12086 13229 12592 14875 11068 13810 13748 12384 13592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31524000 10024 33 9480 19159 15356 15356 1 9606 Homo sapiens -0.20647922728358026 GGGGGFGYQK Unmodified 926.42463 0.42463001 4606 Q9NVP1;Q4ZG72;Q8N254 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 0 0 4.5 3.5 1 1 42.027 42.027 2 0.00012994 10987 20230619_1880_Aki_TMTPro18x_K_F1 166.17 134.04 94199 63080 90249 106180 121300 131570 107730 108190 132590 86709 93483 74964 94022 77860 90021 66457 101750 74264 86975 58134 92565 103910 123200 130520 110140 111560 131990 88550 97657 76775 95763 79659 92109 67501 97051 70555 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39188000 10025 4606 9481 19160;19161 15357;15358 15357 2 9606 Homo sapiens -0.04152531830516182 GGGGGGPGEGFDVAK Unmodified 1260.5735 0.57347909 4705 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 3.5 0.5 1 1 46.017 46.077 3 2.3165E-05 12170 20230619_1883_Aki_TMTPro18x_K_F4 102.57 86.313 136160 124930 131570 125180 141860 145150 141000 148880 190160 177500 178760 178480 202380 160080 157500 201800 195440 168910 125960 114350 134130 126780 146520 145450 143770 152550 190520 177920 184910 180550 203620 167940 163270 200170 186440 160880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 256320000 10026 4705 9482 19162;19163 15359;15360 15360 2 9606 Homo sapiens -0.04638470718282406 GGGGGGYGSGGSSYGSGGGSYGSGGGGGGGR Unmodified 2382.9446 0.94456998 2778 H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2;H6VRF9 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 7 0 1 35.082 35.154 3 1.4247E-80 7365 20230619_1887_Aki_TMTPro18x_K_F7 268.83 216.87 + 2288.3 1975.5 22106 14304 184950 24359 146270 9535 52192 0 5459.3 7786.8 6471.3 70705 9808.2 2189.4 36442 6266.3 2268.3 1865 23080 13535 176400 24012 146260 10922 56567 0 7964.8 9671.4 7239.2 66936 11324 3612.2 34401 6019.2 2 1 2 2 2 2 2 2 2 0 2 2 2 2 2 2 2 2 96521000 10027 2778 9483 19164 15361;15362 15362 2 9606 Homo sapiens -0.19158451789280662 GGGGGPCGFQPASR Unmodified 1303.5728 0.57276759 4390 Q96QR8 PURB Transcriptional activator protein Pur-beta yes yes 0 0 0 7.5 0.5 1 1 36.461 36.489 2 3.9451E-08 8057 20230619_1888_Aki_TMTPro18x_K_F8 152.7 133.95 35548 22800 25394 36357 33840 36525 41784 36075 38433 36971 37096 36649 55197 37959 32846 47365 43184 37676 32748 21001 26842 35570 34695 36895 41535 36932 39309 37315 38895 37292 54641 39637 34439 46866 41180 35907 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28552000 10028 4390 9484 19165;19166 15363;15364 15364 2 9606 Homo sapiens -0.06687588638988018 GGGGNFGPGPGSNFR Unmodified 1376.6222 0.62216062 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 3.4 2.06 1 1 1 1 1 42.245 42.291 2 6.2802E-33 11044 20230619_1880_Aki_TMTPro18x_K_F1 256.47 191.31 832900 700770 744520 809970 830190 907210 912830 898260 890680 958840 943270 957180 1090700 891240 929030 1152300 967260 1041400 769620 642460 765390 810450 857650 909960 914980 919870 911420 965560 971920 969920 1100500 935350 950930 1146900 925610 990040 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 6964499999.999999 10029 3491 9485 19167;19168;19169;19170;19171 15365;15366;15367;15368;15369 15365 5 9606 Homo sapiens -0.051085573585169186 GGGGPGGGGPGGGSAGGPSQPPGGGGPGIR Unmodified 2269.0584 0.058417951 3197 M0R0C6;Q92945;A0A384P5V3 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 7.5 0.5 2 2 37.956 37.981 3;4 1.2242000000000001E-62 8427 20230619_1887_Aki_TMTPro18x_K_F7 251.44 234.16 56512 45332 52243 56517 47123 61554 61395 63633 75364 70926 73041 69275 75707 67097 63359 77083 80195 81219 52216 41598 53391 56228 49838 61882 61514 65045 75877 71254 75126 70350 76631 69814 65650 77493 76575 77094 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 593630000 10030 3197 9486 19172;19173;19174;19175 15370;15371;15372 15370 3 9606 Homo sapiens -0.02534892165749625 GGGGSGGYYGQGGMSGGGWR Oxidation (M) 1819.7332 0.73324399 44 Q53F48;A0A024QZK8;P31942-2;P31942;P31942-3;B4DHY1;A0A024QZP1;P31942-4 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes no 0 1 0 8 0 1 40.239 40.228 3 2.403E-11 9568 20230619_1888_Aki_TMTPro18x_K_F8 126.42 124.06 19850 16539 21587 22477 22242 25845 25436 23340 26884 27633 27470 27498 31196 25530 25593 23468 30001 31843 18370 15189 21804 22250 23138 25814 25504 24137 27342 27695 28318 27838 31448 26313 26353 24094 28675 30150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35444000 10031 44 9487 19176 15373 15373 21 1 9606 Homo sapiens -0.14383330503460456 GGGHILPYDQPLR Unmodified 1421.7415 0.74154747 606;2430 H7C0X5;O75225;A0A024RA40;Q9H3G5;H7C218;B3KW79 CPVL Probable serine carboxypeptidase CPVL no no 0 0 0 7.5 0.5 1 1 43.651 43.696 3 1.8272E-06 10769 20230619_1887_Aki_TMTPro18x_K_F7 138.75 107.12 71004 52206 57499 62721 82590 76682 64570 65420 93166 77702 77957 72777 86729 70900 67332 90632 102080 77123 65511 47906 59912 62655 83297 76272 67020 67927 92692 77782 81016 74086 87346 74239 70844 89940 97165 73487 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 241840000 10032 606;2430 9488 19177;19178 15374 15374 1 9606 Homo sapiens 0.04754636266147827 GGGHVAQIYAIR Unmodified 1240.6677 0.66765425 3200 M0R210;P62249;M0R3H0;M0R1M5;M0QX76 RPS16 40S ribosomal protein S16 yes no 0 0 0 2 0.816 1 1 1 38.838 38.878 3 5.01E-19 9250 20230619_1881_Aki_TMTPro18x_K_F2 193.52 169.49 611590 444100 495390 563420 543280 536560 596920 587210 664120 621300 603210 561040 630170 521310 581990 695900 679840 649400 564230 407760 513960 558860 561780 545950 600780 597370 670400 624280 622690 571310 640060 548370 598670 693550 649310 617400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6521299999.999999 10033 3200 9489 19179;19180;19181 15375;15376;15377 15376 3 9606 Homo sapiens 0.05694712894501208 GGGIDPTVK Unmodified 842.44978 0.44978213 2710 Q8TEQ6;B7ZLC9;Q58EZ8 GEMIN5 Gem-associated protein 5 yes no 0 0 0 5 0 1 42.348 42.431 2 0.012465 10553 20230619_1885_Aki_TMTPro18x_K_F5 91.853 41.813 25461 17000 28398 27852 32609 39647 31006 33320 32398 30854 37649 41346 37930 38489 35853 28607 55568 56134 23538 15662 28668 27373 33514 39021 31417 34400 33132 31641 38422 41372 38667 39288 37537 30467 52981 53022 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25129000 10034 2710 9490 19182 15378 15378 1 9606 Homo sapiens 0.022255229720371972 GGGLFLLAGPPASVETLGPR Unmodified 1908.0469 0.046897198 2406 C9J5N1;B3KSP9;Q9BTE6;Q9BTE6-2;Q9BTE6-3 PTGES3L-AARSD1;AARSD1 Alanyl-tRNA editing protein Aarsd1 yes no 0 0 0 3 0.816 1 1 1 63.596 63.611 3 5.2398E-16 19929 20230619_1882_Aki_TMTPro18x_K_F3 149.86 130.62 105520 85453 97562 102730 85911 109300 102400 96549 113430 108490 111480 120940 131570 111010 127860 122280 118730 141500 97506 78384 99639 102410 90741 109710 102650 99878 114870 109410 115450 121850 133450 115470 129550 123800 113850 134110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 229730000 10035 2406 9491 19183;19184;19185 15379;15380 15379 2 9606 Homo sapiens 0.12919562548881913 GGGNHQNNYQPY Unmodified 1347.5592 0.55922601 756;3227 A0A087WUK2;A0A024RDB5;O14979;B4DTA2;B4DGN3;O14979-2;O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 4 0 1 33.558 33.612 2 0.0012042 6982 20230619_1883_Aki_TMTPro18x_K_F4 65.06 61.805 4486.6 3878.1 4005 3815.2 4397.2 5247.7 6212.6 3693.4 7894.3 3425.2 5578.8 3331.8 4511 3898.1 3591.7 4473.6 4926.9 3422.2 4146.4 3550.1 4115.7 3878.6 4591.1 5163.4 6199.7 3880.7 7832.1 3487.2 5768.5 3418.1 4596.7 4030.9 3746.6 4425.7 4690.7 3267.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4027600 10036 756;3227 9492 19186 15381 15381 1 9606 Homo sapiens -0.10065123146569022 GGGPAGAGGEAPAALR Unmodified 1307.6582 0.65821178 4048 Q5RKV6 EXOSC6 Exosome complex component MTR3 yes yes 0 0 0 4.5 0.5 1 1 38.29 38.358 2 5.4924E-42 8836 20230619_1885_Aki_TMTPro18x_K_F5 271.21 235.85 120380 94004 96831 98921 111570 123470 115630 108090 132120 122610 136170 133730 151260 125200 123260 149440 161010 151160 111100 86134 100560 99860 114910 122680 116850 111890 133820 123530 140140 135020 152580 130730 128050 149810 153620 143590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144460000 10037 4048 9493 19187;19188 15382;15383 15383 2 9606 Homo sapiens 0.016688998183099102 GGGPMGPGSGPNLR Oxidation (M) 1268.5932 0.59316868 3178 L0R4W3;P0CG12 CHTF8 Chromosome transmission fidelity protein 8 homolog isoform 2 yes no 0 1 0 7.5 0.5 1 1 34.945 34.979 2 0.056858 7291 20230619_1887_Aki_TMTPro18x_K_F7 56.632 43.124 16357 12489 13055 17133 20902 22250 19258 19606 24533 16037 19902 19383 20964 15077 18655 22430 23158 23562 15093 11475 13680 16975 21056 22046 19665 20115 24481 16517 20678 19400 21241 16095 19279 22470 22117 22366 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11950000 10038 3178 9494 19189;19190 15384 15384 1847 1 9606 Homo sapiens -0.030384179791781207 GGGPVATLSR Unmodified 913.49813 0.49812931 2756 C9JJX6;E9PDC3;O00192-2;O00192 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome yes no 0 0 0 8 0 1 37.719 37.705 2 0.0016593 8562 20230619_1888_Aki_TMTPro18x_K_F8 103.8 73.296 43224 30396 36937 38240 65181 71470 66001 63260 86994 29189 33060 32362 33304 23919 47061 28366 38503 32330 39885 27910 38496 38402 65532 69536 67051 64252 85092 31536 36496 32452 34627 25212 47032 28716 36879 30688 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22818000 10039 2756 9495 19191 15385 15385 1 9606 Homo sapiens 0.03792016611964755 GGGQIIPTAR Unmodified 968.54033 0.54032847 3447;2436 P13639;Q8TA90;B4DPU3;B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;K7EP67;K7EJ74 EEF2;EFTUD2;SNRP116;U5-116KD Elongation factor 2;116 kDa U5 small nuclear ribonucleoprotein component no no 0 0 0 4.33 2.75 1 2 1 1 1 39.375 39.416 2 0.00037552 9763 20230619_1880_Aki_TMTPro18x_K_F1 128.86 118.44 944260 732600 833180 822460 936590 957360 933180 919430 1202200 1095500 1181400 1112200 1239000 986130 1026200 1293800 1338100 1116300 872000 671670 856960 825350 964690 957440 949430 946510 1208500 1098500 1214800 1124700 1252400 1037700 1065800 1284600 1275800 1063000 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5741400000 10040 3447;2436 9496 19192;19193;19194;19195;19196;19197 15386;15387;15388;15389;15390 15386 5 9606 Homo sapiens 0.054799920203208785 GGGSCSGSAGGGGSGSLPSQR Unmodified 1778.7602 0.76018702 170 B4DKR6;A0A024R1X0;O15234 CASC3 Protein CASC3 yes no 0 0 0 6 0 1 30.967 30.999 3 0.0027902 6152 20230619_1886_Aki_TMTPro18x_K_F6 67.866 63.623 0 0 1080.7 1369.6 1370.5 695.94 1321.4 1503.1 1611.1 1089.4 1142 1893.1 0 0 1313.7 1049.2 1100.9 1579.3 0 0 1013.4 1258.9 1389.9 772.39 1344.1 1469.4 1603.6 1145.2 1150.7 1818.1 0 0 1299.9 1067.2 1058.7 1492.7 0 0 1 1 1 1 1 1 1 1 1 1 0 0 1 1 1 1 1657900 10041 170 9497 19198 15391 15391 1 9606 Homo sapiens -0.09804266682863272 GGGSLPESLRR Unmodified 1127.6047 0.60471964 1466 A0A384NL38;Q14376;Q5QPP1 GALE UDP-glucose 4-epimerase yes no 0 0 1 1 0 1 35.194 35.194 3 0.00029458 8084 20230619_1880_Aki_TMTPro18x_K_F1 86.344 61.207 28336 24893 29752 30841 36266 36111 36068 37233 41943 33428 42447 39296 39245 35861 34702 41953 49273 39870 26225 22834 30207 30731 37118 36150 36563 37853 42377 34180 43359 39545 39973 37407 36207 41927 46938 37926 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29762000 10042 1466 9498 19199 15392 15392 1 9606 Homo sapiens 0.04602147106470511 GGGTGGPNHPPAPR Unmodified 1270.6167 0.61668131 1307 P48634;A0A1U9X982;A0A1U9X9A9;A0A1U9X999;A0A1U9X998;A0A1U9X993;A0A1U9X988;A0A1U9X996;A0A1U9X985;A0A1U9X977;A0A1U9X975;A0A1U9X974;A0A1U9X9A5;A0A1U9X987;A0A1U9X972;B4DLY2 PRRC2A Protein PRRC2A yes no 0 0 0 5.5 0.5 1 1 23.202 23.256 3 8.854800000000001E-29 3859 20230619_1886_Aki_TMTPro18x_K_F6 214.42 194.81 33796 20045 39763 43111 40207 49599 41717 42089 45896 40461 50601 46473 50483 45346 38223 27831 51238 50528 31242 18554 39929 41674 41794 49432 42123 43482 46680 41183 51645 46844 50962 45914 39739 29562 48893 47754 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81391000 10043 1307 9499 19200;19201 15393 15393 1 9606 Homo sapiens -0.007802361503536304 GGGVGGFLPAMK Oxidation (M) 1105.559 0.559015 4728 Q9Y3I0;B4DNA0;B4DNG5;B4DXF1 RTCB tRNA-splicing ligase RtcB homolog yes no 0 1 0 2.5 0.5 1 1 51.823 51.875 2;3 0.0066954 15262 20230619_1881_Aki_TMTPro18x_K_F2 66.056 37.887 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10044 4728 9500 19202;19203 15394;15395 15394 2882 2 9606 Homo sapiens 0.010457855998538435 GGGVGGFLPAMK Unmodified 1089.5641 0.56410038 4728 Q9Y3I0;B4DNA0;B4DNG5;B4DXF1 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 3.5 0.5 1 1 57.666 57.684 2 1.3588E-06 17506 20230619_1882_Aki_TMTPro18x_K_F3 155.75 123.53 124160 135240 119490 130500 101690 146230 118700 125920 138310 141100 134890 125350 137460 122290 140190 142060 145760 159400 115010 123690 121610 132460 107800 146220 119370 130430 139700 141330 138640 127890 140380 127320 142830 143400 139500 151170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55185000 10045 4728 9500 19204;19205 15396;15397 15396 2 9606 Homo sapiens 0.022900894624626744 GGHGQQDLYR Unmodified 1129.5265 0.52646932 3976 Q4KMP7;H3BSE1 TBC1D10B TBC1 domain family member 10B yes no 0 0 0 3.5 0.5 1 1 23.258 23.325 3 2.2193E-05 3903 20230619_1883_Aki_TMTPro18x_K_F4 144.65 111.43 7184.2 2369.2 5912.8 5340.6 8266 7282.4 8189.3 7916.4 12124 5416.2 8490.5 7832.1 6789.9 6008.2 5739.1 5861.9 6278.7 5741.9 6608.5 2203.8 6142.7 5172.2 8393.3 7228.8 8375.9 7975.9 11954 5693.6 8799.4 7784.2 6936.6 6246 5884.8 5888 5998.5 5456.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3018800 10046 3976 9501 19206;19207 15398;15399 15399 2 9606 Homo sapiens -0.033112854787759716 GGHMDDGGYSMNFNMSSSR 3 Oxidation (M) 2096.7622 0.76223721 3564;3963 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;Q96E39;Q2VIN3;A0A1B0GUK8 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 3 0 3 0 1 33.149 33.22 3 0.0057143 6823 20230619_1882_Aki_TMTPro18x_K_F3 59.733 56.309 8893.7 992.96 5080.3 9324.1 10845 4959.1 9474.5 7159.5 6594.5 9169 10236 9279.3 9741.8 6591.9 5417.6 7068.9 5158.5 6945.8 8150.2 993.16 5582.3 8651.3 10717 5399.1 9535.9 7229.9 7039.2 9151.7 10297 9320.2 9735.1 6921.1 5581 7085.8 4950.5 6591.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49522000 10047 3564;3963 9502 19208 15400 15400 2228;2229;2230 1 9606 Homo sapiens -0.24227342051563028 GGHMDDGGYSMNFNMSSSR 2 Oxidation (M) 2080.7673 0.76732259 3564;3963 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;Q96E39;Q2VIN3;A0A1B0GUK8 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 2 0 4 0 1 36.496 36.541 3 0.0030904 8151 20230619_1883_Aki_TMTPro18x_K_F4 66.893 60.099 8589.2 2279.8 8911.7 10026 13432 6527.9 11765 10374 9451.8 10293 11415 11363 11046 9332 6685.6 11135 7813.3 11828 7911.2 2161.9 9091.1 9430 13473 6962 11885 10339 9846.2 10431 11598 11420 11075 9789.3 6964.2 11186 7492.6 11212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22484000 10048 3564;3963 9502 19209 15401 15401 2228;2229;2230 1 9606 Homo sapiens -0.22983038188976934 GGHMDDGGYSMNFNMSSSR Oxidation (M) 2064.7724 0.77240796 3564;3963 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;Q96E39;Q2VIN3;A0A1B0GUK8 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 1 0 4 0 1 41.791 41.834 3 0.0078894 10356 20230619_1883_Aki_TMTPro18x_K_F4 58.304 55.017 18783 11149 21885 25461 26452 22407 23758 23680 23529 24374 26045 24173 30675 23860 19765 21408 27121 29221 17362 10331 22055 24467 26974 22913 24112 24131 24102 24587 26781 24536 30627 24520 20704 21987 25892 27664 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40956000 10049 3564;3963 9502 19210 15402 15402 2228;2229;2230 1 9606 Homo sapiens -0.21738734326345366 GGHMDDGGYSMNFNMSSSR Unmodified 2048.7775 0.77749334 3564;3963 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;Q96E39;Q2VIN3;A0A1B0GUK8 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 0 0 5 0 1 46.242 46.319 3 8.0497E-40 12193 20230619_1885_Aki_TMTPro18x_K_F5 261.15 259.88 31233 10976 27793 30837 26862 23467 27100 30926 30462 38488 40305 37389 40832 32742 27504 43028 35588 39104 28751 10250 28511 29382 27945 24442 27445 31276 31272 38431 40871 37865 41008 34476 28738 42807 33996 37169 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125960000 10050 3564;3963 9502 19211 15403 15403 1 9606 Homo sapiens -0.20494430463713798 GGIEIVK Unmodified 714.42759 0.42759012 72 B4DZQ5;A0A024QZY5;Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 0 0 0 6.5 1.12 1 1 1 1 47.16 47.233 2 0.07792 12960 20230619_1886_Aki_TMTPro18x_K_F6 73.616 14.411 156410 120390 140530 169900 166330 185240 169910 164080 187860 177340 191680 174600 183390 171700 191290 197240 200020 188660 144450 110640 144640 167610 170880 185620 171650 169480 190500 178490 196050 177390 187920 178480 194890 197320 191210 179320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1730599999.9999998 10051 72 9503 19212;19213;19214;19215 15404 15404 1 9606 Homo sapiens 0.0589534329427579 GGIMLPEK Oxidation (M) 859.44734 0.44733929 1453;4826 A0A384N6A4;P61604;Q9UNM1;B8ZZL8;S4R3N1 HSPE1;EPFP1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial no no 0 1 0 7.5 0.5 1 1 48.626 48.703 3 0.0072882 12882 20230619_1887_Aki_TMTPro18x_K_F7 76.899 23.729 370290 315170 328360 396000 444660 468720 448620 418830 478830 294820 275050 248290 278810 216500 279110 325870 311480 219260 342160 289170 339220 394100 452660 467310 452730 428100 477530 303550 291870 253420 284470 230120 285820 319640 297070 209720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 953860000 10052 1453;4826 9504 19216;19217 15405 15405 954 1 9606 Homo sapiens 0.01199351242735247 GGIMLPEK Unmodified 843.45242 0.45242467 1453;4826 A0A384N6A4;P61604;Q9UNM1;B8ZZL8;S4R3N1 HSPE1;EPFP1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial no no 0 0 0 7.5 0.5 1 1 50.807 50.884 3 0.0098125 13865 20230619_1888_Aki_TMTPro18x_K_F8 75.854 34.825 374280 299700 317660 358330 417540 499030 430210 406570 502770 126870 115560 79874 115840 80060 188660 168430 171230 75902 345610 274910 329240 358800 426660 491630 434830 414300 491460 142570 136770 83770 121790 87223 189450 162730 163340 73422 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 844850000 10053 1453;4826 9504 19218;19219 15406;15407 15407 2 9606 Homo sapiens 0.024436551053554467 GGINLTATCPQSELDAETVK Unmodified 2103.0154 0.015398653 4705 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 5 0 1 56.141 56.202 3 0.0015944 16356 20230619_1885_Aki_TMTPro18x_K_F5 70.335 64.304 49024 32449 43598 50342 37444 55563 47512 56021 56700 54313 63324 51417 58590 60427 50604 65548 63933 67287 45236 29874 44705 49411 39789 55733 47642 57125 57475 54910 64358 52713 59649 62268 52420 65843 61065 63879 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 349300000 10054 4705 9505 19220 15408;15409 15409 2 9606 Homo sapiens 0.008011569419522857 GGIPNVEGAAK Unmodified 1011.5349 0.53490874 219 A0A024R2Z6;Q9BVP2-2;Q9BVP2 GNL3 Guanine nucleotide-binding protein-like 3 yes no 0 0 0 6 0 1 45.484 45.57 2 0.0011009 11906 20230619_1886_Aki_TMTPro18x_K_F6 121.5 71.462 74517 62766 76002 74568 81825 90319 79634 80419 98115 92870 105550 99788 107620 82934 86102 115250 120940 110050 68928 57559 77156 74557 84496 89919 81020 83165 99194 93416 107960 100480 108720 87841 90012 114910 115300 104620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104100000 10055 219 9506 19221 15410 15410 1 9606 Homo sapiens 0.02960268437857394 GGIQELIGLIK Unmodified 1139.6914 0.69140938 3546 P35251-2;P35251 RFC1 Replication factor C subunit 1 yes no 0 0 0 3 0 1 64.658 64.69 2 1.1112E-05 20402 20230619_1882_Aki_TMTPro18x_K_F3 132.78 72.189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10056 3546 9507 19222 15411 15411 1 9606 Homo sapiens 0.12715133608321594 GGITQPNINDSLEITK Unmodified 1698.8788 0.87882882 2524 B4DL80;G5EA36;P30260;P30260-2;I0EZ68;I3L328 CDC27 Cell division cycle protein 27 homolog yes no 0 0 0 6 0 1 55.726 55.802 3 0.00053351 16339 20230619_1886_Aki_TMTPro18x_K_F6 77.13 63.467 43165 32893 37179 37673 35217 46957 40717 39429 44163 47647 42469 47733 52592 44294 49767 60881 50837 55621 39851 30165 38248 37780 36963 46592 40848 41019 44771 47719 44144 48342 53221 46676 50779 60584 48663 52867 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38363000 10057 2524 9508 19223 15412 15412 1 9606 Homo sapiens 0.05734455564424934 GGIVDEGALLR Unmodified 1098.6033 0.60332266 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;A0A286YFA2;A0A286YFL2;Q9UMY2;Q8N5M8;A0A286YFM8;A0A286YF78;Q96RV5 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 5 1.41 1 1 1 1 1 51.505 51.57 2 7.567E-12 14680 20230619_1883_Aki_TMTPro18x_K_F4 200.05 104.52 3102600 2618300 2737100 2754300 2650200 3136800 2436100 2410500 2766200 3242100 4315300 5817100 3365200 3668800 3217400 4081900 4435200 6389600 2866700 2398400 2809200 2776300 2757100 3127300 2481700 2537100 2860900 3308400 4322600 5709600 3463800 3874800 3347100 4221000 4245300 6037300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3030099999.9999995 10058 1334 9509 19224;19225;19226;19227;19228 15413;15414;15415 15414 3 9606 Homo sapiens 0.05796513017708094 GGIVGMTLPIAR Unmodified 1183.6747 0.67471346 1085 A0A0S2Z410;Q99714;A0A804HHW5;Q99714-2 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 4.5 0.5 1 1 58.423 58.453 3 4.0238E-07 17252 20230619_1885_Aki_TMTPro18x_K_F5 128.01 77.723 14460 13358 13824 18447 18684 21180 19249 21367 21813 16977 12560 12679 18942 12548 18767 17210 15423 14206 13377 12265 14200 18236 19045 21205 19448 21688 21713 17269 13610 13068 19097 13212 18892 17058 14781 13530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98405000 10059 1085 9510 19229;19230 15416 15416 1 9606 Homo sapiens 0.09022309450733701 GGIVSQVK Unmodified 786.45995 0.45995289 134 A0A024R1A3;P22314-2;P22314 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 3.67 3.09 1 1 1 43.218 43.249 2 0.0060103 11506 20230619_1880_Aki_TMTPro18x_K_F1 125.58 46.468 649820 429300 592750 647830 759280 791000 717580 731080 909990 738660 857270 849630 811840 706290 800080 580830 935360 775630 599710 395110 609660 637830 774440 787450 731820 751140 913470 749840 880010 852130 829660 726840 819910 597470 892540 735220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 568260000 10060 134 9511 19231;19232;19233 15417;15418 15417 2 9606 Homo sapiens 0.05818130697275592 GGKPEPPAMPQPVPTA Unmodified 1572.797 0.79701344 3494 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;Q9NQS8;E9PPU1 RPS3 40S ribosomal protein S3 yes no 0 0 1 7.5 0.5 1 1 50.146 50.225 3 0.029312 13465 20230619_1888_Aki_TMTPro18x_K_F8 52.453 40.307 133680 108250 130220 133500 124270 152950 134290 143170 156130 142690 157140 145590 163720 130130 153330 172130 156900 149120 123580 99317 132520 133010 129980 152920 135570 146900 157830 144350 161390 147260 166320 136960 156400 170970 150030 141900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1693699999.9999998 10061 3494 9512 19234;19235 15419;15420 15420 2 9606 Homo sapiens 0.033526816716175745 GGLAGEFQR Unmodified 933.46683 0.46682918 3279 O60502-4;O60502;B3KMK2 MGEA5 Protein O-GlcNAcase yes no 0 0 0 5 0 1 42.179 42.262 2 0.00016076 10455 20230619_1885_Aki_TMTPro18x_K_F5 122.74 86.041 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10062 3279 9513 19236 15421 15421 1 9606 Homo sapiens -0.0025655642215269836 GGLGAPPLQSAR Unmodified 1122.6146 0.61455605 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;A0A7P0Z4H6;A0A590UJX5;A0A7P0T999;E9PJF6 AMPD2 AMP deaminase 2 yes no 0 0 0 3.67 3.09 1 1 1 42.229 42.268 2 6.3538E-05 11092 20230619_1880_Aki_TMTPro18x_K_F1 126.49 91.661 253990 193360 224500 238180 316260 329770 296810 314450 373370 220100 220030 214170 229480 197140 255520 239920 262720 216460 234530 177450 231970 238060 320750 326160 302620 319630 369520 227620 233440 217270 235260 206140 259660 239180 250980 206010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 128490000 10063 1570 9514 19237;19238;19239 15422;15423 15422 2 9606 Homo sapiens 0.05815335111856257 GGLGLILK Unmodified 769.50617 0.5061748 2190 B1AJY5;B1AJY7;O75832 PSMD10 26S proteasome non-ATPase regulatory subunit 10 yes no 0 0 0 3.5 0.5 1 1 58.507 58.523 2 0.0012384 17677 20230619_1883_Aki_TMTPro18x_K_F4 145.87 42.158 337750 275680 306250 322130 303490 355860 389990 381290 423730 349590 367830 367730 368710 326890 388420 390090 396990 401350 312060 252800 313850 322060 317990 357830 389170 386920 427250 355650 380190 371220 377350 341850 395110 391640 379780 381070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 294640000 10064 2190 9515 19240;19241 15424;15425 15425 2 9606 Homo sapiens 0.11220195599389626 GGLGLSGAK Unmodified 758.42865 0.42865276 3492 P22695;H3BRG4;H3BSJ9 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 1.5 0.5 1 1 44.023 44.064 2 0.0001184 11895 20230619_1880_Aki_TMTPro18x_K_F1 152.63 77.251 748040 562580 786760 862210 1006300 1047000 1016400 1026600 1294200 767170 856060 822550 822610 734730 833640 717760 961780 796090 691640 517580 799800 848120 1027900 1043800 1032300 1043200 1283500 791950 897340 829720 841740 759850 853830 726470 917840 755910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 250480000 10065 3492 9516 19242;19243 15426;15427 15426 2 9606 Homo sapiens 0.03977557663188236 GGLGYVEETSEFEAR Unmodified 1642.7475 0.74748029 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 0 1.5 0.5 2 2 53.467 53.481 2;3 1.6681000000000002E-41 15961 20230619_1881_Aki_TMTPro18x_K_F2 290.61 267.24 87432 59253 79309 83974 69342 91142 75683 90917 110100 89831 94540 97001 103890 79107 89142 98141 100210 101090 80697 54486 81125 82851 73191 91547 77059 92828 109540 91091 98133 97548 104980 83243 91563 98457 95775 95978 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 176070000 10066 4666 9517 19244;19245;19246;19247 15428;15429 15429 2 9606 Homo sapiens -0.048183548034558044 GGLLEHK Unmodified 752.41809 0.41808807 3543 P33908 MAN1A1 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA yes yes 0 0 0 6.5 0.5 1 1 38.835 38.908 3 0.016796 8956 20230619_1886_Aki_TMTPro18x_K_F6 81.958 22.753 44479 33030 42399 43907 59206 59498 66151 72501 92599 54695 53982 39700 63286 43794 38471 55622 56035 40830 41089 30339 43515 43666 60351 59272 67061 72626 91185 55843 57471 41206 63079 45705 40614 54832 53339 38993 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38193000 10067 3543 9518 19248;19249 15430 15430 1 9606 Homo sapiens 0.031975750087553934 GGLQEVAEQLELER Unmodified 1569.7999 0.79985021 2341 Q96IQ6;B3KM57;Q9UIV1-2;Q9UIV1 CNOT7 CCR4-NOT transcription complex subunit 7 yes no 0 0 0 2.5 0.5 1 1 61.541 61.561 3 4.3118E-06 19074 20230619_1882_Aki_TMTPro18x_K_F3 119.96 100.64 29620 23578 30926 30021 26067 29200 33182 32142 33240 31159 30144 31571 34372 29139 32290 34898 33947 33096 27394 21642 31230 29788 27642 29655 33053 32613 33738 31554 31276 31953 34849 30441 32976 34871 32458 31457 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124030000 10068 2341 9519 19250;19251 15431 15431 1 9606 Homo sapiens 0.03774228330121332 GGLVDEK Unmodified 716.37047 0.37046918 3668;3029 P56545;P56545-3;P56545-2;H0Y9M9;X5D7T7;H0Y8U5;X5D8Y5;Q4KMQ8;Q13363-2;Q13363;H0Y8W7 CTBP2;CTBP1 C-terminal-binding protein 2;C-terminal-binding protein 1 no no 0 0 0 3 0 1 41.247 41.306 2 0.022375 10155 20230619_1882_Aki_TMTPro18x_K_F3 105.95 47.37 136030 66235 179390 171050 205100 232320 163670 215310 184690 138500 240550 288330 183880 192520 226700 90472 259360 255590 125800 61592 178940 164750 209850 229610 168350 218980 188880 148610 242090 282300 191740 196320 230790 102270 247810 241030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69551000 10069 3668;3029 9520 19252 15432 15432 1 9606 Homo sapiens 0.0009387601791104316 GGLVSDAYGEDDFSR Unmodified 1586.6849 0.68488004 533 A0A024R8R0;J3QQJ0;Q9UHR5-2;Q9UHR5;X6R3T8;J3QLH3;J3KS14;F5H478;B7Z4X9;J3KRU5 SAP30BP SAP30-binding protein yes no 0 0 0 1.33 0.471 2 1 51.272 51.295 2 4.3703E-33 15010 20230619_1881_Aki_TMTPro18x_K_F2 259.75 245.06 64099 53195 58805 58277 55414 64425 69108 67027 61791 82855 85476 80923 82367 77563 75740 94229 82807 89829 59235 48748 60132 58553 58199 64752 68688 68711 64383 82784 86423 82157 83891 80965 77632 94126 79209 85341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161170000 10070 533 9521 19253;19254;19255 15433;15434 15434 2 9606 Homo sapiens -0.08499500871698729 GGMALALAVTK Oxidation (M) 1046.5794 0.57941609 560 A0A024R983;P10155;P10155-3;P10155-5;P10155-4;P10155-2;H0Y9N5 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 1 0 2 0 1 51.748 51.786 3 0.010194 15227 20230619_1881_Aki_TMTPro18x_K_F2 65.5 47.233 60317 47583 52487 63797 60489 62937 60651 62807 72669 59469 60139 60383 66153 49815 67784 63577 62229 65841 55701 43700 54150 63063 62207 63705 61515 64093 72832 60325 62574 60911 67356 52498 68569 63808 59619 62499 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29965000 10071 560 9522 19256 15435 15435 325 1 9606 Homo sapiens 0.057989562596503674 GGMALALAVTK Unmodified 1030.5845 0.58450147 560 A0A024R983;P10155;P10155-3;P10155-5;P10155-4;P10155-2;H0Y9N5 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 0 0 4 0 1 58.49 58.493 3 0.0025109 17699 20230619_1883_Aki_TMTPro18x_K_F4 76.143 49.629 42363 34052 40180 39371 38996 50629 50276 43020 51830 36651 36308 31440 38775 28279 42783 37718 36356 33469 39151 31224 40992 39479 40957 50150 50058 44319 52046 37260 38079 32077 39654 29796 43050 37532 34828 31844 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61490000 10072 560 9522 19257 15436 15436 1 9606 Homo sapiens 0.07043260122281936 GGNASGEPGLDQR Unmodified 1256.5745 0.57454173 1947 A4FUT8;Q7LBC6 JMJD1B;KDM3B Lysine-specific demethylase 3B yes no 0 0 0 1.5 0.5 1 1 33.038 33.067 2 2.3286E-06 6896 20230619_1881_Aki_TMTPro18x_K_F2 143.42 113.95 16786 11359 21996 23102 23424 31060 21513 26383 26307 19334 29803 30638 27947 25267 23087 11976 31949 31909 15545 10497 21944 22443 24201 30657 21974 27077 26629 20273 30329 30383 28364 25556 23985 13403 30482 30096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32360000 10073 1947 9523 19258;19259 15437 15437 1 9606 Homo sapiens -0.04348256349385338 GGNFGFGDSR Unmodified 1012.4363 0.43625733 3491 P22626;A0A7I2V4I6;A0A7I2V323;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 5.5 1.12 1 1 1 1 43.675 43.749 2 9.8226E-08 11052 20230619_1885_Aki_TMTPro18x_K_F5 192.91 171.4 2130300 1701500 1910600 2083400 2250800 2499100 2409500 2287900 2508800 2508800 2636700 2518000 2970100 2263700 2307600 3004200 2864200 2735000 1967800 1561100 1965500 2078000 2315600 2490700 2423100 2357900 2556200 2524100 2712500 2548700 2987800 2383500 2392700 2989900 2734200 2601000 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 13083000000 10074 3491 9524 19260;19261;19262;19263 15438;15439;15440;15441 15439 4 9606 Homo sapiens -0.06946334807196308 GGNFGGR Unmodified 663.30887 0.30887197 640;1469;2450 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2YQX9;B4E0B5;Q32P51;A0A024QZ98;B4DP35;H0YH80;Q3MI39;A0A7I2V334;A0A7I2V2R4;A0A7I2V3K5;A0A7I2V661;A0A7I2V453;A0A7I2YQY2;A0A7I2V520;A0A7I2V459;A0A7I2V4P7;A0A7I2V360;A0A7I2V4F8;A0A7I2V2Q7;A0A7I2V4E2;A0A7I2V666;A0A7I2V5P1;A0A7I2V2X1;A0A7I2V2M7;A0A7I2V5N7;A0A7I2V3U8;A0A7I2V2F1;A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;Q66K53;P51991-2;B4DDB6 HNRNPA1;HNRPA1;hCG_2020860;HNRNPA1L2;RP11-78J21.1;HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 5.4 2.42 1 1 1 1 1 29.333 29.38 2 0.013007 5570 20230619_1886_Aki_TMTPro18x_K_F6 114.54 45.15 177900 67577 279140 276750 428260 372680 282610 399970 226060 129540 332540 361580 180630 239400 329780 70770 361740 298230 164730 63713 277200 263170 427890 369890 292160 399210 237150 152290 330010 352220 196820 241820 332990 87454 345360 281080 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 201150000 10075 640;1469;2450 9525 19264;19265;19266;19267;19268 15442;15443;15444;15445 15444 4 9606 Homo sapiens -0.03625010890721114 GGNIGDGGGAADR Unmodified 1115.4956 0.49556312 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;Q9NTC4;Q9HAP0 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 1.5 0.5 1 1 30.413 30.445 2 8.456E-16 6156 20230619_1880_Aki_TMTPro18x_K_F1 215.53 175.26 41860 24989 54329 52914 83773 87143 60397 76406 72983 43225 76486 92002 64820 71648 79040 24246 90584 80593 38737 23123 54576 51536 84003 85216 62689 77859 73647 46985 77933 90377 67318 72044 80441 28477 86490 75987 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99551000 10076 3656 9526 19269;19270 15446;15447 15446 2 9606 Homo sapiens -0.057564835836501516 GGNRPNTGPLYTEADR Unmodified 1716.818 0.81795989 639 A0A8V8TRE5;A0A8V8TQJ6;A0JP02;B4DMB9;B4DJX4;A0A8V8TQ09;A0A8V8TQJ8;A0A024RAY7;B4DHK5;Q9HAU0-3;Q9HAU0-5;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6 PLEKHA5 Pleckstrin homology domain-containing family A member 5 yes no 0 0 1 5 0 1 35.149 35.239 3 0.00070173 7640 20230619_1885_Aki_TMTPro18x_K_F5 120.21 86.796 16928 12291 14686 18150 21944 23813 19182 19845 29546 21188 21085 22076 25875 20423 18436 25823 26519 23935 15624 11304 15235 17907 22168 23553 19809 20579 29162 21393 22236 22321 25905 21411 19363 25736 25278 22763 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23720000 10077 639 9527 19271 15448 15448 1 9606 Homo sapiens -0.011776366951380624 GGPAEGQLQENDR Unmodified 1369.6222 0.6222202 877 H0YKB1;A0A0G2JNH2;A0A7I2V5U5;Q6MZU1;G5E9E7;A9CQZ8;A0A087X0K9;G3V1L9;Q07157-2;Q07157 TJP1;DKFZp686A1195 Tight junction protein ZO-1 yes no 0 0 0 1 0 1 34.228 34.228 2 0.0056117 7669 20230619_1880_Aki_TMTPro18x_K_F1 81.709 73.009 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10078 877 9528 19272 15449 15449 1 9606 Homo sapiens -0.0478060214920788 GGPAGPYQQSQR Unmodified 1244.5898 0.58979786 3078 H3BTB7;Q5JPH6;Q5JPH6-2 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes no 0 0 0 6.5 0.5 1 1 32.057 32.121 2 0.00063947 6161 20230619_1887_Aki_TMTPro18x_K_F7 100.48 73.379 16143 10844 14342 17821 18201 20360 19495 19974 20990 17459 18278 17462 22973 14709 18633 15488 26500 22380 14896 9990.1 14801 17442 18640 20373 19623 20363 21187 17783 19080 17633 23067 15342 19436 15945 25250 21198 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 10082000 10079 3078 9529 19273;19274 15450;15451 15451 2 9606 Homo sapiens -0.02271344761538785 GGPASVPSSSPGTSVK Unmodified 1413.71 0.70997257 419 A0A024R6Z0;O43237-2;O43237;J3KRI4;J3KRZ2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 8 0 1 41.355 41.352 3 1.5543E-12 10019 20230619_1888_Aki_TMTPro18x_K_F8 169.4 139.59 47697 37744 42741 43862 54588 55403 54407 48894 69584 61157 60068 62181 68547 47104 54361 67928 60320 56717 44057 34613 44013 43951 55755 55021 55306 50733 69653 61202 62446 62564 68946 50219 55930 67261 57631 54002 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99900000 10080 419 9530 19275 15452 15452 1 9606 Homo sapiens 0.01966598721560331 GGPDFSNLEK Unmodified 1062.4982 0.49818889 2875 E5RFP0;Q8WVJ2 NUDCD2 NudC domain-containing protein 2 yes no 0 0 0 4.5 0.5 2 2 49.898 49.953 2;3 0.00053903 13744 20230619_1885_Aki_TMTPro18x_K_F5 132.91 114.13 253300 205080 232300 237360 242940 245320 238000 242450 294950 291560 289150 288760 316860 285100 273100 344830 327090 342060 234050 188040 237860 237240 251340 247530 242090 249200 297150 292000 298110 293230 320600 297320 281860 345190 312540 324860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 294470000 10081 2875 9531 19276;19277;19278;19279 15453;15454;15455 15455 3 9606 Homo sapiens -0.030560281787074928 GGPEEGVR Unmodified 799.38243 0.38243085 4550 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 yes yes 0 0 0 1 0 1 28.955 28.955 2 0.036662 5586 20230619_1880_Aki_TMTPro18x_K_F1 74.127 37.107 11095 6374.6 14267 13766 16918 17882 16959 18516 16150 10552 16031 17073 13428 13617 13671 6348.6 18153 15684 10265 5901.9 14267 13339 17342 17769 17078 18655 16466 11292 16350 16906 13817 13776 14101 7046.1 17309 14807 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5556100 10082 4550 9532 19280 15456 15456 1 9606 Homo sapiens -0.025285072389010566 GGPEVQQVPAGER Unmodified 1322.6579 0.65787742 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 3 0 1 36.21 36.265 2 0.0019824 8077 20230619_1882_Aki_TMTPro18x_K_F3 104.87 84.537 15591 10066 18430 17682 16825 21793 15139 14999 20112 23872 27859 26625 30124 23363 20441 24466 29165 25090 14419 9283.5 18457 17269 17586 21552 15534 16033 20532 23737 28293 26789 30198 24275 21457 24595 27793 23839 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16715000 10083 3606 9533 19281 15457 15457 1 9606 Homo sapiens 0.0094548009844857 GGPEVQQVPAGERPLWFICSGMGTQWR Oxidation (M) 3058.4542 0.45417936 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 1 1 3 0 1 60.884 60.913 4 4.5648E-13 18782 20230619_1882_Aki_TMTPro18x_K_F3 126.5 112.27 23752 20167 25045 25569 18125 24798 22632 22185 26404 32628 27706 25567 27053 26205 23820 32393 27693 32100 21978 18505 25236 25368 19534 25066 22691 23127 26772 32198 28319 26298 27502 27332 24542 32409 26490 30476 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52297000 10084 3606 9534 19282 15458 15458 2277 1 9606 Homo sapiens 0.007290438493782858 GGPEVQQVPAGERPLWFICSGMGTQWR Unmodified 3042.4593 0.45926474 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 1 3 0 1 62.192 62.221 3 2.6588E-73 19329 20230619_1882_Aki_TMTPro18x_K_F3 286.31 269.05 87040 70788 90892 71452 42444 58979 68921 60885 62227 102760 89654 93163 111390 92426 87757 107540 95662 103350 80510 64829 91164 72042 48688 60662 67846 63228 65052 101250 91662 94947 111840 96184 90200 107530 91506 98175 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 407170000 10085 3606 9534 19283 15459 15459 1 9606 Homo sapiens 0.019733477119643794 GGPGAAPGGASPASSSSAASSPSSGR Unmodified 2113.9625 0.96245188 4462 Q9BXK1;D6W5Z8 KLF16 Krueppel-like factor 16 yes no 0 0 0 6.5 0.5 1 1 33.54 33.601 3 2.727E-20 7109 20230619_1886_Aki_TMTPro18x_K_F6 151.45 142.17 14540 8199.1 11142 10605 16428 14427 13753 12982 17821 10710 11257 7410.8 11411 9556.1 15213 10380 11404 11191 13393 7538.9 11672 10563 16561 14273 14139 13298 17646 10866 11848 7764 11820 9837.2 15165 10479 10947 10621 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36339000 10086 4462 9535 19284;19285 15460;15461 15460 2 9606 Homo sapiens -0.04997084796468698 GGPGGELPR Unmodified 838.42972 0.42971539 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;C9J2Z7;C9K073 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 3.5 0.5 1 1 35.079 35.133 2 0.012753 7595 20230619_1882_Aki_TMTPro18x_K_F3 80.165 24.724 296140 233590 272260 283180 294860 339110 308870 307830 416190 355530 350780 355660 425970 318240 298490 395310 419400 341710 273590 214300 278980 282660 305210 337930 313890 317870 415270 356950 366120 359820 426150 333700 312930 392760 399570 325410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 333660000 10087 1676;2901 9536 19286;19287 15462;15463 15462 2 9606 Homo sapiens 0.004037720320980043 GGPGGPGGPGGPMGR Oxidation (M) 1222.5513 0.55130386 1025 H7BY36;A0A0D9SFL3;B0QYK0;C9JGE3;Q01844-2;Q01844-6;Q01844-3;Q01844;Q01844-5 EWSR1 RNA-binding protein EWS yes no 0 1 0 6.5 0.5 1 1 30.659 30.726 2 0.058481 6080 20230619_1886_Aki_TMTPro18x_K_F6 54.416 49.258 9714.5 6308.7 5678.1 8744.6 10342 8097 11489 10311 11177 6848.2 10057 8535.5 10513 6409.7 7006.7 9569.1 10936 6617.1 8940.3 5800.9 6191.2 8618.7 10384 8293.4 11496 10294 11340 7160.9 10377 8532.4 10536 6853.6 7415.6 9393.4 10396 6332 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13006000 10088 1025 9537 19288;19289 15464 15464 593 1 9606 Homo sapiens -0.05106973667693637 GGPGGPGGPGGPMGR Unmodified 1206.5564 0.55638924 1025 H7BY36;A0A0D9SFL3;B0QYK0;C9JGE3;Q01844-2;Q01844-6;Q01844-3;Q01844;Q01844-5 EWSR1 RNA-binding protein EWS yes no 0 0 0 7.5 0.5 1 1 35.843 35.873 2 5.9529E-25 7836 20230619_1888_Aki_TMTPro18x_K_F8 233.46 199.2 39459 26929 33948 34583 39785 49738 38165 39239 50133 39013 36377 33588 48352 40360 29653 44061 42664 37486 36407 24735 35041 34485 40903 48882 38939 40788 49842 39323 38451 34599 48091 41606 31276 43813 40659 35693 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46248000 10089 1025 9537 19290;19291 15465;15466 15466 2 9606 Homo sapiens -0.03862669805084806 GGPGPGPGPYHR Unmodified 1147.5523 0.55229014 3960 Q96QC0;Q2L6I0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes no 0 0 0 7 0.816 1 1 1 29.896 29.947 3 2.2571E-06 5296 20230619_1887_Aki_TMTPro18x_K_F7 118.03 100.22 17376 16072 23865 22360 29658 29605 28370 26597 29212 24661 27206 31187 22268 20905 25591 25391 27543 24745 16130 14758 23781 22157 30264 29319 28703 27331 29619 25227 27828 30999 23058 22123 26070 25412 26315 23520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40843000 10090 3960 9538 19292;19293;19294 15467;15468 15468 2 9606 Homo sapiens -0.015583912364945718 GGPGSECAEWAWGPCTPSSK Unmodified 2119.8728 0.87277394 2934 E9PPJ5;E9PLM6;P21741 MDK Midkine yes no 0 0 0 7 0 1 56.007 56.065 3 1.0273E-05 16211 20230619_1887_Aki_TMTPro18x_K_F7 94.845 79.591 18286 17305 21420 20840 13966 17893 16607 14921 17288 30036 24355 25524 32332 22888 22067 30397 29934 33298 16949 15865 21382 20721 15177 18253 16633 15864 17926 29389 25003 26010 32228 24128 23100 30558 28588 31584 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21275000 10091 2934 9539 19295 15469 15469 1 9606 Homo sapiens -0.1423675400110369 GGPGSTLSFVGK Unmodified 1105.5768 0.57677356 4411 Q9BQ61 C19orf43 Uncharacterized protein C19orf43 yes yes 0 0 0 2.5 0.5 1 1 52.574 52.62 2 4.8708E-05 15634 20230619_1881_Aki_TMTPro18x_K_F2 151.15 107.01 202940 164850 179420 200350 179530 217790 189420 200450 225810 231330 228650 218170 262740 202580 190510 282300 250650 253010 187470 151220 184360 199640 187000 218480 191620 206770 228220 231750 235790 221710 263550 213770 198830 280480 239260 240610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 257890000 10092 4411 9540 19296;19297 15470;15471 15470 2 9606 Homo sapiens 0.028208241263882883 GGPLPEPR Unmodified 821.43955 0.43955179 2592 B4DUD5;P33240-2;P33240;E9PID8;E7EWR4;B3V096 CSTF2 Cleavage stimulation factor subunit 2 yes no 0 0 0 4 0 2 37.403 37.447 2 0.028039 8505 20230619_1883_Aki_TMTPro18x_K_F4 79.597 31.093 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10093 2592 9541 19298;19299 15472;15473 15472 2 9606 Homo sapiens 0.021689600374770635 GGPNYQEGLR Unmodified 1089.5203 0.52032131 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;K7EIE7 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 4.5 0.5 1 1 36.692 36.761 2 3.1035E-05 8206 20230619_1883_Aki_TMTPro18x_K_F4 154.75 103.69 288560 221890 256270 252730 207940 241760 246600 230710 283910 342410 385080 358440 381450 319740 316420 414620 385050 345900 266480 203470 262240 252670 221080 245130 247720 239550 291300 340480 389900 362020 386310 336010 327230 411030 367480 329410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 407320000 10094 161 9542 19300;19301 15474;15475 15474 2 9606 Homo sapiens -0.020858037102925664 GGPPFAFVEFEDPRDAEDAVYGR Unmodified 2540.1608 0.16081734 3140 J3KTL2;Q07955;Q59FA2;Q07955-3;Q07955-2 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 1 4 1.41 1 1 1 1 1 62.739 62.767 3 1.8105E-34 19169 20230619_1885_Aki_TMTPro18x_K_F5 210.92 202.83 316400 263830 285910 335070 279440 330520 329150 332220 340550 401780 411020 392910 419970 378950 391400 471780 409500 441450 292360 242120 293210 332420 292310 334560 329470 341170 349360 401950 418690 399000 427090 396150 399970 470690 391860 419490 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1175700000 10095 3140 9543 19302;19303;19304;19305;19306 15476;15477;15478;15479;15480 15479 5 9606 Homo sapiens -0.047656639374508813 GGPPGPPISR Unmodified 933.50321 0.50321468 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C044;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 7.5 0.5 1 1 36.939 36.964 2 0.00041903 8159 20230619_1888_Aki_TMTPro18x_K_F8 126.62 85.675 52778 39371 47801 53996 54587 56023 54929 52856 72419 52851 61472 53164 63986 46988 47424 60152 70823 55189 48737 36175 49105 53338 56180 56427 55891 54233 72283 53469 63610 53800 64415 49398 49869 59922 67429 52529 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 172080000 10096 1676;2901 9544 19307;19308 15481;15482 15482 2 9606 Homo sapiens 0.033803204745595394 GGPPPPPPPPPR Unmodified 1161.6295 0.62947783 3791 Q03111 MLLT1 Protein ENL yes yes 0 0 0 7 0 1 37.256 37.321 3 0.00053753 8114 20230619_1887_Aki_TMTPro18x_K_F7 71.03 60.273 25401 17351 26657 24252 26067 29510 25902 24640 32887 26246 28102 24479 31254 27138 27721 24960 31239 30491 23473 15952 26949 23992 27132 29323 26346 25554 32902 26413 29170 25030 31637 27803 28428 25439 29850 28905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23725000 10097 3791 9545 19309 15483 15483 1 9606 Homo sapiens 0.055128269798160545 GGPSPGDVEAIK Unmodified 1125.5666 0.5666028 3422 Q53G61;Q53G21;P09661;H0YLR3;H0YMA0 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 0 4 0 2 46.895 46.937 2;3 3.2921E-09 12528 20230619_1883_Aki_TMTPro18x_K_F4 173.71 102.79 132230 89778 104460 125920 120920 147810 125770 130620 182710 148090 146610 143470 174090 140730 139560 186010 175600 178250 121920 82545 108820 124410 124730 147340 128250 135070 181410 148710 153260 145860 175170 147680 144770 185610 167690 169370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 704310000 10098 3422 9546 19310;19311 15484;15485 15484 2 9606 Homo sapiens 0.008842164011412024 GGPTPQEAIQR Unmodified 1152.5887 0.58873523 4512 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 0 0 4.5 0.5 1 1 36.197 36.266 2 8.0565E-06 7976 20230619_1885_Aki_TMTPro18x_K_F5 151.83 122.45 148090 102190 119010 128960 160180 166120 145480 150170 190890 160250 189470 196930 205860 162830 159950 207020 230280 217460 136580 93846 123980 128510 162800 164820 148930 154760 191770 162600 195160 197160 207400 171470 167590 207760 219560 206480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 166770000 10099 4512 9547 19312;19313 15486;15487;15488 15488 3 9606 Homo sapiens 0.018544408695561287 GGPTVDPEELFR Unmodified 1315.6408 0.64083038 2347 B3KM81;Q59E88;Q53G26;Q96EY1-2;Q96EY1 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes no 0 0 0 3.5 0.5 1 1 58.144 58.161 2 8.6234E-07 17570 20230619_1883_Aki_TMTPro18x_K_F4 160.97 141.18 205100 180760 193830 216990 186300 230100 233100 218550 250340 229300 236890 248880 249020 222750 231630 275740 253510 264070 189650 165760 197910 216330 195560 231380 232820 224430 253460 231810 244330 250930 253040 233350 237300 275470 242420 250900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 134530000 10100 2347 9548 19314;19315 15489;15490 15490 2 9606 Homo sapiens -0.004364405073374655 GGQLHGARPLGTGER Unmodified 1504.7859 0.78587191 688 F5H145;B3KTF4;A0A024RBQ7;Q6N063-4;Q6N063-2;Q6N063 OGFOD2 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 yes no 0 0 1 8 0 1 28.64 28.666 4 0.0018284 5196 20230619_1888_Aki_TMTPro18x_K_F8 79.81 42.385 25386 15016 23681 26487 35219 31947 32206 31079 35333 15595 24228 24687 18432 18783 24124 13653 22150 17199 23420 13856 24382 25858 35537 31865 32726 31406 35297 16898 25143 24450 19290 19280 24261 14042 21178 16316 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4588600 10101 688 9549 19316 15491 15491 1 9606 Homo sapiens 0.05367040412352253 GGQSGLNLSK Unmodified 959.50361 0.50360861 799 A0A087WSW7;Q6I7N8;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;F6RPV8;Q9NRZ9-4;Q9NW36 HELLS Lymphoid-specific helicase yes no 0 0 0 1 0 1 43.273 43.273 2 0.011031 11554 20230619_1880_Aki_TMTPro18x_K_F1 87.568 40.37 28172 13096 26175 28387 22010 31386 22615 24426 32082 26473 30961 28815 37722 29193 25608 29601 35462 33033 25964 12141 26708 27415 23289 31305 23078 25494 32087 26742 32082 29171 37696 30142 26816 29923 33818 31347 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12326000 10102 799 9550 19317 15492 15492 1 9606 Homo sapiens 0.022236954037566647 GGQTHLGLPVFNTVK Unmodified 1566.8518 0.85182621 2059 Q6IAL5;B2R8A1;A8K4W7;P53597;A0A494C0D1;B7Z438 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes no 0 0 0 3 0 1 53.318 53.371 3 0.022422 15649 20230619_1882_Aki_TMTPro18x_K_F3 57.595 41.731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10103 2059 9551 19318 15493 15493 1 9606 Homo sapiens 0.09107436534532098 GGQVQIVTK Unmodified 928.53418 0.53418046 1599 A0A669KB77;P11137-3;P11137;A8K5Y1;A0A024R409;Q59FX9;P11137-2 MAP2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 8 0 1 43.369 43.38 2 0.00062692 10837 20230619_1888_Aki_TMTPro18x_K_F8 129.1 75.627 23144 13814 25926 23287 22777 21643 25998 24750 28493 24463 29214 35016 30225 26913 29354 21652 34275 37804 21385 12738 26037 22717 23958 22078 26113 25076 28897 25058 30028 34755 30785 27764 30092 22773 32771 35722 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17048000 10104 1599 9552 19319 15494 15494 1 9606 Homo sapiens 0.06705473788804284 GGQVYATNTR Unmodified 1065.5203 0.52032131 2096 B3KM89;A8K6V0;O94855;O94855-2;Q4W5D3 SEC24D Protein transport protein Sec24D yes no 0 0 0 6 0.816 1 1 1 31.461 31.531 2 3.9027E-05 5901 20230619_1887_Aki_TMTPro18x_K_F7 150.61 112.48 35479 18312 41511 46694 72736 86550 58601 75327 66220 34116 51961 60646 52963 52348 59932 25402 61667 55263 32777 17018 42183 45269 72740 84133 60154 76550 66354 37542 54113 60041 54407 52840 60714 27757 58942 52196 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 37208000 10105 2096 9553 19320;19321;19322 15495;15496;15497;15498 15498 4 9606 Homo sapiens -0.009818037103059396 GGQYENFR Unmodified 969.43044 0.43044367 2587 E7ERS3;B4DTK7;Q86VM9;B4DZ24;Q86YU5 ZC3H18;FLJ00419 Zinc finger CCCH domain-containing protein 18 yes no 0 0 0 4.5 0.5 1 1 36.951 37.019 2 0.0022541 8348 20230619_1883_Aki_TMTPro18x_K_F4 129.65 105.32 98020 74889 74042 90027 105770 112220 95988 94715 123990 105700 114350 125210 122620 96163 98741 129970 132460 114180 90415 68710 77774 89937 107170 111410 98182 98271 124320 106870 118180 125240 123730 101930 102850 129090 126280 108680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107830000 10106 2587 9554 19323;19324 15499 15499 1 9606 Homo sapiens -0.05549433318856245 GGREDMDISK Oxidation (M) 1122.4975 0.49753696 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;Q6PJY7;E9PPR5;E9PNB5 NASP Nuclear autoantigenic sperm protein yes no 0 1 1 3 0 1 32.772 32.843 3 0.080231 6682 20230619_1882_Aki_TMTPro18x_K_F3 47.154 21.717 105890 58712 94872 100910 152850 160860 121860 127030 137350 103270 139850 136100 110420 102890 120030 75190 156430 121980 97634 54175 98188 99120 153330 157270 125140 131430 139020 106700 142080 135480 114180 105770 123620 78789 149080 115480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88607000 10107 3605 9555 19325 15500 15500 2273 1 9606 Homo sapiens -0.05881190890090693 GGREDMDISK Unmodified 1106.5026 0.50262234 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;Q6PJY7;E9PPR5;E9PNB5 NASP Nuclear autoantigenic sperm protein yes no 0 0 1 3.5 0.5 1 1 37.672 37.721 3 0.011876 8672 20230619_1882_Aki_TMTPro18x_K_F3 73.632 41.217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10108 3605 9555 19326;19327 15501;15502 15501 2 9606 Homo sapiens -0.04636887027481862 GGRPGGFPDHPHR Unmodified 1385.6701 0.67011387 698 A0A024RBX6;O00625 PIR Pirin yes no 0 0 1 7.5 0.5 1 1 23.301 23.372 4 1.7441E-07 3821 20230619_1888_Aki_TMTPro18x_K_F8 127.02 97.719 242120 188030 211780 240150 297670 355330 272540 256270 326300 275590 294820 312790 286230 232890 272100 318380 300380 275070 223570 172610 219160 239600 302090 348190 277800 269170 328040 278770 303720 313140 291700 247320 278750 316030 286950 261810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271200000 10109 698 9556 19328;19329 15503 15503 1 9606 Homo sapiens -0.007294386478179149 GGRPNEIEPPPPEMPPWQK Oxidation (M) 2171.047 0.046973553 3120;3982 Q52LJ0;I6L9E8;Q8NCA5;A0A8I5KR56;A0A8I5QKV5;A0A8I5KZA5;B4DY25;B4DT23;B3KTW4 FAM98B;FAM98A Protein FAM98B;Protein FAM98A no no 0 1 1 6 0 1 48.307 48.386 3 3.525E-05 13224 20230619_1886_Aki_TMTPro18x_K_F6 93.812 74.98 13743 11400 14663 14267 14396 16836 20232 16587 16658 17495 20049 17796 18349 17695 15970 21910 21798 20988 12716 10460 14819 14209 15121 16821 19943 16994 17303 17641 20322 18068 18687 18469 16636 21880 20794 19948 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47033000 10110 3982;3120 9557 19330 15504 15504 1812 1 9606 Homo sapiens 0.008291944865504774 GGSDDSSKDPIDVNYEK Unmodified 1824.8014 0.80136636 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 1 2.71 1.03 1 2 2 2 47.118 47.174 3;4 3.7096E-23 13141 20230619_1881_Aki_TMTPro18x_K_F2 201.3 182.88 499340 373950 422430 496600 548290 613990 541420 529340 543840 591660 649100 618220 673670 561150 605790 678100 662110 591790 460890 343470 437890 492740 559530 609920 546400 548280 558400 595390 661910 624730 683420 586800 620680 674600 632470 563260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2080399999.9999998 10111 261 9558 19331;19332;19333;19334;19335;19336;19337 15505;15506;15507 15506 3 9606 Homo sapiens -0.07804227162432653 GGSFEFK Unmodified 770.3599 0.35990449 4097 Q69YN4-4;Q69YN4-2;Q69YN4-3;Q69YN4;H0YBN5 KIAA1429 Protein virilizer homolog yes no 0 0 0 7 0 1 49.974 50.056 2 0.088365 13603 20230619_1887_Aki_TMTPro18x_K_F7 66.994 6.0323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10112 4097 9559 19338 15508 15508 1 9606 Homo sapiens -0.034461066365224724 GGSFENNWNIYK Unmodified 1427.647 0.64697839 3469 P17858;P17858-2;Q7L2M7;Q9BSP4 PFKL ATP-dependent 6-phosphofructokinase, liver type yes no 0 0 0 1 0 1 56.459 56.459 3 0.00017132 17037 20230619_1880_Aki_TMTPro18x_K_F1 101.71 50.699 38816 36227 38961 38424 35333 42562 41949 42575 54560 42371 44041 42154 44049 39560 45032 46995 48192 48078 35924 33175 39514 38702 37211 42730 42303 43484 54408 42854 45675 42734 45027 41281 45959 47163 46079 45654 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15108000 10113 3469 9560 19339 15509 15509 1 9606 Homo sapiens -0.04973922275826226 GGSFGGR Unmodified 636.29797 0.29797293 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;B4E036;Q66K53;Q8NFG3;H7C1J8;P51991-2;B4DDB6;B4E3E6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 6 0 1 29.8 29.831 2 0.017062 5710 20230619_1886_Aki_TMTPro18x_K_F6 109.11 34.916 56640 19623 90542 90279 146200 119110 92204 136640 74845 41920 118800 138610 62005 92236 128490 23639 126380 106920 52445 18589 89924 85619 145530 118570 95751 135740 78763 50310 117590 134650 68489 92903 128770 29886 120800 100740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41952000 10114 1469;2450 9561 19340 15510 15510 1 9606 Homo sapiens -0.03472413265001251 GGSGGSYGGGGSGGGYGGGSGSR Unmodified 1790.7204 0.72043069 2786 P35527;CON__P35527;K7EQQ3 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 6 0.816 1 1 1 30.81 30.881 3 1.476E-63 6112 20230619_1886_Aki_TMTPro18x_K_F6 203.75 72.641 + 1398.5 0 8394.1 4988.4 17336 11602 42878 4116 13491 705.27 4155.6 7029.4 1299.6 23511 3601.8 387.96 16779 2827.1 1322.4 0 8089.5 4700.6 17809 11067 40698 4747.5 14960 1028.7 4629.3 7390.4 1543.6 22380 4323.7 839.75 15830 2700.4 1 0 2 2 2 2 2 2 2 1 2 2 1 2 2 1 2 1 36771000 10115 2786 9562 19341;19342;19343 15511;15512 15511 2 9606 Homo sapiens -0.14330070361938851 GGSGSGPTIEEVD Unmodified 1203.5255 0.52552585 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNX1;B4E1T6 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 1 0 1 45.654 45.654 2 1.3285E-05 12557 20230619_1880_Aki_TMTPro18x_K_F1 131.06 107.63 102150 95209 104920 117300 146220 180670 154630 147560 197640 141820 159790 146820 173890 131050 139320 186450 182910 168540 94559 87310 107100 117430 149040 177050 156640 152840 197220 143940 166210 148460 175330 138690 144930 185320 174480 160330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 687890000 10116 1031 9563 19344 15513 15513 1 9606 Homo sapiens -0.06809589429008156 GGSPFAIVITQQHQIHR Unmodified 1888.0068 0.006763718 4550 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 yes yes 0 0 0 5 0 1 46.866 46.942 4 4.1347E-06 12497 20230619_1885_Aki_TMTPro18x_K_F5 105.63 90.474 35630 28538 33797 34959 39069 37197 42464 39965 44065 38697 43620 39744 45854 33141 37932 43835 42960 39413 32927 26183 34568 34816 40205 37524 42661 40609 44767 39210 44842 40105 46313 34989 39020 43615 41031 37494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105600000 10117 4550 9564 19345 15514 15514 1 9606 Homo sapiens 0.09828060668974103 GGSPYIAAK Unmodified 862.45487 0.45486751 1145 A0A0S2Z5X1;Q96DA6;Q96DA6-2;A0A2R8Y839 DNAJC19 Mitochondrial import inner membrane translocase subunit TIM14 yes no 0 0 0 4.5 3.5 1 1 42.776 42.778 2 0.00051347 11306 20230619_1880_Aki_TMTPro18x_K_F1 150.4 116.6 152700 84005 148940 190640 224730 239790 215890 223650 250960 168310 218500 196000 202950 182560 207780 114490 263360 210580 140880 77863 153030 184130 227160 238150 219190 228090 252060 174070 224900 197230 207980 185270 213700 121850 251080 199180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 121790000 10118 1145 9565 19346;19347 15515;15516 15515 2 9606 Homo sapiens 0.018138268346433506 GGSRGEEVGELSR Unmodified 1331.643 0.64295564 160 A0A024R1T5;P09543-2;P09543;B4DI06;B4DFN6 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes no 0 0 1 2 0 1 31.116 31.182 2 0.00012316 6172 20230619_1881_Aki_TMTPro18x_K_F2 119.39 79.328 4641.4 4003.2 6720.2 4826.5 5997.6 6808.1 5105.9 6060.4 5717.6 6574.8 7865.4 5886.1 8031.9 6495.5 6509.7 9454.9 9798.7 7825.7 4309.1 3671.3 6630.2 4836.9 6259.8 6716.5 5228.8 6251 5879.6 6596.1 7960.7 6043 8120.5 6836.7 6843.3 9353.1 9329.9 7457.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7607200 10119 160 9566 19348 15517 15517 1 9606 Homo sapiens -0.00960011769529956 GGSTTGSQFLEQFK Unmodified 1485.71 0.70997257 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;Q14157-1;Q14157-4;B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like no no 0 0 0 4.5 3.5 1 1 57.589 57.615 2 1.0705E-11 17524 20230619_1880_Aki_TMTPro18x_K_F1 215.72 178 82696 69117 80418 92849 71988 93135 87251 85934 99507 104030 95331 93649 101820 87112 86332 105320 101050 107040 76459 63464 81847 91788 75973 93947 87483 88789 100570 103860 98269 95315 102990 91055 88980 105580 96579 101620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47122000 10120 3877;3878 9567 19349;19350 15518;15519 15518 2 9606 Homo sapiens -0.013454012784222869 GGSWIQEINVAEK Unmodified 1429.7201 0.72014333 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 6.5 0.5 1 1 59.518 59.571 3 1.7184E-15 17931 20230619_1886_Aki_TMTPro18x_K_F6 196.38 162.7 189710 169600 185120 194670 163040 201260 192420 216630 211500 233270 247460 231790 249910 240790 217660 291810 258150 295810 175480 155450 188180 194700 172070 203350 193060 220620 215900 234770 252180 235880 253660 250680 224570 292410 246870 280780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 356290000 10121 3758 9568 19351;19352 15520 15520 1 9606 Homo sapiens 0.022472064468047392 GGSWVVIDSSINPR Unmodified 1485.7576 0.75759147 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8;B4DIG6;B4DWK9;B4DIW1;B4DK31;B4DIR2 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 8 0 1 56.357 56.414 2 0.0020943 16321 20230619_1888_Aki_TMTPro18x_K_F8 106.49 76.508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10122 3833 9569 19353 15521 15521 1 9606 Homo sapiens 0.03414297712424741 GGSYTQAASSDSAQGSDVSLTACKV Unmodified 2446.0918 0.091811073 1147 E3UN97;A0A2I6J4B1;A0A1W1B5Q9;A0A1W1B5P4;A0A1D8MAR2;A0A455JTQ2;A0A1D3KYM1;A0A173ADK6;A0A0U5PXQ4;A0A7D5H2K1;A0A7R9KAH2;A0A7R9PSR9;A0A0S4XQY3;A0A4P2SS15;A0A4P2SSH9;A0A6B7FUX4;A0A6B7HGN6;A0A6B9MMF8;A0A6C0SH12;A0A6M4AA77;A0A2U3QLK0;A0A5H2UEZ4;A0A858LHP1;A0A2H4WPZ2;A0A1B1LKE5;A0A2P9FIJ6;Q95J07;A0A858LHN0;A0A7U3K2K7;A0A3G2LWQ6;A0A858BAV0;A0A060VD08;A0A060VHC2;A0A060VHD0;A0A858LHP8;A0A7S5GS05;A0A7S5GRV6;A0A7U3L8N8;A0A0D6K972;A0A7S5L7I4;A0A7T3P0T0;A0A1C3PHF4;A0A0S4XQW9;A0A0U5Q0S0;A0A7U3K2N3;A0A0S4XQY0;A0A1C3PH97;A0A1C3PH98;A0A1C3PHA9;A0A1C3PHC8;A0A1G4HQ08;A0A0S4XQX0;A0A858B942;A0A2U3QLP6;A0A7T3RIS7;A0A0N9HRK5;A0A7U3L8C6;A0A0U5Q1Q2;A0A0S4XQU8;A0A060VD16;A0A0D6K9K6;A0A0S2IKY1;A0A7U3K2H5;A0A0S4XQM2;A0A0S4XQP0;A0A0S4XQR6;A0A0K0TQ18;A0A7U3K2H2;A0A1C3PH91;A0A0S4XQR9;A0A7U3K2F1;A0A1C3PHH2;A0A7U3K2H0;A0A7U3K2G2;A0A7U3K2G0;A0A3G1Z2Q6;A0A7U3K2F2;A0A7U3K2I5;A0A0S4XQT2;A0A7U3K2B1;A0A0S4XQV7;A0A1C3PHF2;A0A1D0BSQ3;A0A1G4HPZ1;A0A1D3KYL9;A0A6C0SED3;A0A060VCY5;A0A7U3L8D9;A0A6C0SEA7;A0A6B9WHU5;A0A6B9WFF6;A0A6B9VUB6;A0A6B9KHB8;A0A0S4XRV2;A0A0U5PZ31;A0A858B8J5;A0A858B907;A0A7U3L8P7;A0A6B9KGV8;A0A3S6RI33;A0A3S6RI04;A0A858B925;A0A858B842;A0A6B9KNP2;A0A6B9VR84;X5MFD7;A0A6B9KAI8;A0A6B7HG58;A0A6B7HFR9;A0A6C1HWN0;A0A6C1HWM2;A0A6C1HWG8;A0A7U3L8N4;A0A6C1HWG5;A0A858B763;A0A7U3K2M4;A0A090KKC3;A0A7U3VI76;A0A6C1HWE5;A0A6C0VB37;A0A6C0TKS0;A0A6C0SGG6;A0A3S6RHQ5;A0A0S4XQX6;A0A6B9KFK9;A0A1G4HPZ0;A0A6S7YB88;A0A0S4XQY1;A0A1G4HPV3;A0A286RNI7;A0A1G4HPU6;A0A0U5Q331;A0A1D0C3Y2;A0A1G4HPY8;A0A0U5PU71;A0A1G4HPW4;A0A1D8MAN8;A0A1C3PHG3;A0A1C3PHG8;A0A1D8MAL2;A0A858B927;A0A1D3KYM2;A0A0U5PXI8;A0A0U5KK56;A0A0U5PYZ0;A0A0S4XRG6;A0A0U5PXL2;A0A0S4XR94;A0A858B956;A0A858LFL1;A0A858LGA7;A0A0S4XR96;A0A0S4XRD4;A0A858LGC0;A0A858LGT7;A0A0S4XRI5;A0A0S4XRI6;A0A0U5PXM5;A0A0S4XRT2;A0A0S4XRW0;A0A0U5IHK3;A0A0U5IHQ3;A0A2U3QLM4;A0A1L5LC12;A0A6B7KV80;A0A2P9FIN2;A0A286LDB0;A0A286RNH0;A0A286RNH2;A0A286RNH6;A0A286RNH9;A0A291HVI4;A0A291NGK6;A0A286LDB1;A0A223FL01;A0A858BAV9;A0A1Z1VXF7;A0A3S6RF48;B1PKY1;C5IWZ2;D5H3U1;D5H3U2;D5H3U3;D5H3U4;D5H3U6;D9UB11;A0A286LD90;A0A1W1B695;A0A286LD96;A0A8F5FV40;A0A286LD97;D7GM35;A0A286LD98;A0A1W1B663;A0A3S6RHP3;A0A1W1B5T2;A0A2K4Y3H1;A0A2H4ZAS3;A0A2K4N853;A0A2K4N814;A0A2I6SQU3;A0A2I6J4D9;A0A2I6J4A6;A0A7R9PTL5;A0A2I6J4D4;A0A7U3K2I6;A0A7R9PTI9;A0A7R9PT89;A0A2H4WPY7;A0A2H4WPW6;A0A2K4N860;A0A2I6J4B0;A0A7R9KAX6;A0A2K4Y3F8;A0A7U3K2I8;A0A2P9FIH7;A0A1S7SKC6;A0A291NGN0;A0A2D1CHG2;A0A125R6G4;A0A2H4UK40;A0A2P1CXW7;A0A2P9FII5;A0A2P9FIG8;D0V0C4;A0A2P9FIG5;A0A2P9FIF6;Q5MCQ6;A7MAP4;A0A2P1G6E1;C5IWY0;A0A223PYB8;A0A223FLI6;F4NCR9;A0A3S6RFH2;A0A2U3QLH6;A0A2Z4C138;A0A330NMI6;A0A3Q9B4Q6;A0A3S6RFI0;A0A3S6RFH9;A0A2U3QLI6;A0A3S6RFD8;Q5SUL5;Q5S3G3;Q2LC93;Q2A689;A0A3S6RF85;X5MI15;A0A386IRN0;Q2A688;A0A2U8RNL0;A0A2S1B6U6;A0A2S1B6V2;A0A2U3QLL2;A0A2P9FIS3;A0A2U3QLQ4;A0A2U3QLM0;A0A2U3QLH8;A0A2U3QLI3;A0A2U3QLL9;A0A2U3QLL3;A0A2U3QLJ9;A0A2S1B6V5;A0A2U3QLI9;A0A2U3QLH4;A0A3S6RF33;A0A2S0SYS7;A0A2R3STY5;A0A2U3QLG6;A0A2S1B6V6;A0A8E4J507;A0A2P9FIR9;A0A2P9FIS9;M4QEH4;A0A345F0V2;A0A3G8GE10;A0A3S6RF29;A0A1S5UXJ4;A0A2P9FIP7;X5MPH3;I3ZN77;Q5ZGM8;X5MBH2;A0A8F5J0E1;A9YWM1;D9UB10;B2MVI0;B2R7U3;B6ETN7;C5IWX4;H2DMX5;X5LKD6;A0A346MPT7;A0A3S6RF59;A0A346MPT9;A0A346THJ1;A0A0D6K9L7;A0A375B7T7;A0A8G1LT45;A0A3G2LWU0;X5MFE4;A0A858LKF4;Q95HA5;A0A3G4R8Q7;A0A3G6IIS6;A0A3G6ILP0;A0A7U3K2M2;A0A7U3K2L8;A0A7U3K2K3;A0A7U3K2J7;A0A6B9KAH8;A0A6M8PV20;A0A7U3K2H6;A0A678ZWM0;A0A4P2SSM5;A0A4P2SSK8;A0A4P2SSI7;A0A5H2UF95;A0A678ZMH4;A0A678ZMY4;A0A678ZVJ3;A0A678ZVN3;A0A678ZW80;A0A678ZWL7;A0A678ZWM3;A0A4P2SSP6;A0A678ZZC3;A0A7R9PTI1;A0A678ZH97;A0A678ZZI0;A0A6B7FSY7;A0A6B7FT87;A0A6B7FTG2;A0A6B7FTH0;A0A678ZI33;A0A678ZZD8;A0A4P2SSN8;A0A4P2ST76;A0A678ZGZ9;A0A4P2STQ9;A0A4P2SRE5;A0A4P2SR70;A0A4P2SR52;A0A4P2SR01;A0A455JTM2;A0A678ZM25;A0A455JS07;A0A455JRX1;A0A411GA17;A0A411CX79;A0A4P2STU3;A0A5H2UHK1;A0A4P2SS00;A0A4P2SS53;A0A4P2SSE9;A0A678ZKK9;A0A678ZIN6;A0A678ZIC5;A0A678ZIA4;A0A5H2UI54;A0A5H2UHU6;A0A4P2SQV2;A0A5H2UYT5;A0A5H2UV00;A0A4P2SRS4;A0A2H4RK80;P04439-2;A0A6C0SGK5;A0A678ZH37;A0A678ZGK4;A0A5H2UTB6;B7ZAP7;A0A6B7FVE5;A0A0S4XRG0;Q29840;A0A7U3L8M6;A0A1Z2R893;Q5SRN5;A0A583ZB79;A0A583ZB34;A0A0G2JIF2;A0A3S6RFJ2;A0A3S6RHY6;P04439;A0A5H2UIC5;A0A5H2UYR7;A0A5H2UIF3;A0A5H2UT43;A0A5H2UU86;A0A5H2UUF9;A0A5H2UUH1;A0A5H2UYZ3;A0A5H2UI71;A0A5H2UYJ8;A0A5H2UYK0;A0A5H2UYP3;A0A5H2UYS7;A0A7U3L8N3;A0A5H2UUW3;A0A678ZZE9;A0A5J6CZG2;A0A678ZH10;A0A678ZGT6;A0A678ZGN3;A0A649ZU83;A0A4P2STV7;A0A7U3L8J5;X5MI21;A0A4P2SRG9;A0A5H2UYS1;A0A5A4LK74;A0A7R9KAM5;A0A7R9KC42;A0A7R9KC32;A0A7R9KBA2;A0A1Z2R875;A0A7R9KB10;A0A7R9KAD9;A0A7R9KAX0;A0A7R9KAQ5;A0A6S7YP09;A0A7R9KAK2;A0A6S7YTK2;A0A7R9KAI8;A0A7R9KAI7;A0A7R9KAG9;A0A7R9KAE6;A0A7R9KCP8;A0A7R9PSQ5;A0A6S7XX17;A0A6S7XX07;A0A6S7XU09;A0A6S7XTF4;A0A7R9KAV3;A0A6G7S6I1;A0A0S4XR33;A0A6B7HHT7;A0A238TQ66;A0A6B7HGN9;A0A6B7HGQ0;A0A6B7HGQ4;A0A6C0SGT3;A0A6B7HGN4;A0A6B7HGG7;A0A5H2UF78;A0A6B7IBZ7;A0A6B7HGN3;A0A6B7HGG8;A0A6B7HHU7;A0A6B7IDW6;A0A6B7HGE9;A0A0U5Q074;A0A6C1HXA0;A0A6B7IEM1;A0A6B7IFL7;A0A6B7IFQ5;A0A6B7KQ45;A0A6B7FWJ4;A0A6M5WPK7;A0A6G7S6J8;A0A7L7TX66;A0A6H0Y7F3;A0A6B7FU34;A0A6B7FTH7;A0A7L7TND1;A0A7L7TR54;A0A6B7FUZ8;A0A4V0NP68;A0A6M4EQQ7;A0A5A4LH43;A0A5A4LHD7;A0A7R8ND24;A0A5A4LIR8;A0A4P8D7F1;A0A583ZB21;A0A4Y7LIQ4;A0A5A4LJ79;A0A5A4LLH1;A0A5A4LTQ0;A0A5A4LTS8;A0A5A4M307;A0A5H2UEH6;A0A5A4LLE3;A0A5A4LLF6;A0A5H2UF23;A0A6B7FUW9;A0A5A4LI86;B4DVC4;A0A7R9PT76;A0A7L7TXC4;A0A7D3UWS0;A0A7D5DVF6;A0A7R9PSV1;A0A583ZB83;A0A7R9PSY4;A0A7G4RN38;A0A7G4WM27;A0A7L4X6X6;A0A7L4X795;A0A7R9PSZ4;A0A7L4X7E9;A0A7D7QND4;A0A4Y5WSJ0;A0A7L7TUL6;A0A6B7FVM4;A0A7L4X7H4;A0A7R9KB27;I0J2M4;A0A5H2WTZ8;A0A4P2SRG2;A0A4P2SQT5;A0A2Z6DS69;A0A6G9W1F6;A0A3S6RIB2;A0A5H2UEP3;A0A223PYD8;A0A678ZGM1;A0A1W1B5M6;A0A1D8MAN3;A0A0D6E067;A0A410P8C3;A0A3G2FPD9;A0A3G5BD32;A0A8E4J3R5;A0A6B7HGI7;A1Z1D7;A0A858B9G6;A0A6B7HHU0;A0A7S9C280;O19689;A0A8G1LSM1;A0A4V0NP52;A0A678ZWL4;A0A4P8VYK0;A0A6B7FTE9;A0A7D7QGZ4;A0A8E4NFK9;A0A8E4J527;A0A678ZN67;A0A5A4M351;A0A0F7NGH0;A0A7T3RIP7;D9UB05;A0A410P7W7;A0A3S6RF15;I4EPX9;A0A3S6RF24;A0A493QP44;A0A678ZGZ8 HLA-A;HLA-ABC;HLA-A*01 HLA class I histocompatibility antigen, A-3 alpha chain yes no 0 0 1 5 0 1 50.223 50.299 3 1.7256E-26 13871 20230619_1885_Aki_TMTPro18x_K_F5 176.1 61.092 19350 12107 15689 15926 12453 17651 17343 20543 21153 24754 20069 25709 28683 19671 16737 33399 28930 31305 17838 11128 16200 15797 13368 17770 17331 20884 21323 24804 21043 25847 28416 21235 17995 33168 27578 29747 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38941000 10123 1147 9570 19354 15522 15522 1 9606 Homo sapiens -0.07339116019375069 GGTGFAGSGVK Unmodified 936.46649 0.46649483 796 A8K670;A0A075B6F9;Q9Y314 NOSIP Nitric oxide synthase-interacting protein yes no 0 0 0 4.5 3.5 1 1 41.805 41.802 2 0.00015411 10230 20230619_1888_Aki_TMTPro18x_K_F8 133.23 100.76 18375 12173 19870 17805 19913 22340 20048 18356 30344 19929 23279 18782 23514 18492 16480 17458 20624 19074 16982 11199 20047 17574 20703 22148 20518 19073 30010 20054 24181 19119 23650 19043 17114 17652 19682 18105 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7246000 10124 796 9571 19355;19356 15523;15524 15524 2 9606 Homo sapiens -0.00427976141986619 GGTILAPTVSAK Unmodified 1113.6394 0.63937381 1002 A8K6X3;A0A0C4DG89;Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 2 0 1 49.268 49.326 2 1.5901E-12 14126 20230619_1881_Aki_TMTPro18x_K_F2 231.42 144.75 113730 88758 93582 112440 117270 136370 130470 119700 148990 126340 139150 130100 137200 119740 122540 145790 149710 139240 104980 81470 97236 111880 120410 135670 131290 123640 150260 127510 143070 131630 139440 125210 126490 145660 142910 132360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136830000 10125 1002 9572 19357 15525 15525 1 9606 Homo sapiens 0.08709970194558991 GGTILGTR Unmodified 773.43955 0.43955179 879 A0A087X0M4;A0A8Q3WKX9;Q9BWU0;A0A8Q3WLG9;A0A8Q3WKX1 SLC4A1AP Kanadaptin yes no 0 0 0 4.5 3.5 1 1 38.231 38.224 2 0.030411 9290 20230619_1880_Aki_TMTPro18x_K_F1 79.713 32.055 153780 112960 148550 162310 201620 212880 179690 180140 249640 142280 173550 149990 160930 133340 156050 173950 196490 155190 142060 103860 152210 160430 204700 210630 184520 185270 246960 146310 180910 151560 164480 140220 161080 173060 187320 147750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114300000 10126 879 9573 19358;19359 15526;15527 15526 2 9606 Homo sapiens 0.04376960037461686 GGTIVPR Unmodified 698.40752 0.40752338 3900;2497;4425 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2;Q9BS14 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 6.5 1.12 1 1 1 1 34.72 34.77 2 0.076648 7365 20230619_1888_Aki_TMTPro18x_K_F8 74.191 45.678 352380 230780 335280 347610 466820 480340 429860 458620 553060 358100 511910 522760 457630 434610 451680 300370 590220 548920 325300 212410 344050 343050 473440 475020 439320 467210 553940 372650 524840 520000 468950 444200 466140 318450 563090 518880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 884880000 10127 3900;2497;4425 9574 19360;19361;19362;19363 15528 15528 1 9606 Homo sapiens 0.046255923543299104 GGTLFGGEVCK Unmodified 1123.5332 0.53319418 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 6.5 0.5 1 1 51.316 51.394 2 0.00026424 14197 20230619_1887_Aki_TMTPro18x_K_F7 147.4 96.527 244230 203510 243300 262540 230780 269530 284420 268200 300330 296990 280100 235160 321580 252180 215060 344540 295770 307000 225860 186790 247200 260370 242220 271940 284140 274890 304350 296780 289730 242430 321760 264580 225740 342230 282290 291950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162350000 10128 3578 9575 19364;19365 15529 15529 1 9606 Homo sapiens -0.023631086424074965 GGTLLSVTGEVEPR Unmodified 1413.7464 0.74635808 2592;4494 B4DUD5;P33240-2;P33240;E9PID8;E7EWR4;B3V096;Q9H0L4 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant no no 0 0 0 5 0.816 1 1 1 52.893 52.949 3 2.8924E-07 15333 20230619_1883_Aki_TMTPro18x_K_F4 111.12 89.815 177490 154580 178640 179190 170250 206090 190430 195430 265800 143700 141800 157780 185640 157610 161500 203470 200750 210590 164200 141700 181270 179350 178320 206080 193110 199010 261220 148710 153340 159660 187050 165030 167040 203990 191760 199910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 244390000 10129 2592;4494 9576 19366;19367;19368 15530;15531 15530 2 9606 Homo sapiens 0.05603475618272569 GGTLSMPK Unmodified 789.40547 0.40547447 4459 Q9BWP8-8;Q9BWP8-7;Q9BWP8-6;Q9BWP8-5;Q9BWP8-4;Q9BWP8-3;Q9BWP8-2;Q9BWP8-9;Q9BWP8;Q9BWP8-10 COLEC11 Collectin-11 yes no 0 0 0 1 0 1 44.607 44.607 2 0.0037434 12106 20230619_1880_Aki_TMTPro18x_K_F1 129.47 62.434 72640 54927 64830 67455 82380 90230 82811 82263 111950 80980 112680 125710 92977 90356 113240 101670 132250 121480 67077 50408 66791 67391 84254 89326 84352 84562 112250 83320 114830 124370 96587 94904 115770 103140 126280 115210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53783000 10130 4459 9577 19369 15532 15532 1 9606 Homo sapiens 0.0023479555420635734 GGTPSAFDR Unmodified 906.41954 0.41954463 116;1831;3469 P17858;P17858-2;Q7L2M7;Q9BSP4;P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;B4E162;A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;V9GY25 PFKL;PFKM;PFKP ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type no no 0 0 0 3.5 0.5 1 1 35.764 35.817 2 3.4281E-06 7920 20230619_1883_Aki_TMTPro18x_K_F4 187.3 137.65 549880 442080 540240 470980 633090 556620 544980 533460 690850 635460 717060 781490 689950 620420 682390 701200 850650 830630 508330 405070 550310 474800 647020 556450 559260 549340 696540 641280 733740 780980 705090 649510 703400 710540 812130 787640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 909960000 10131 3469;116;1831 9578 19370;19371 15533 15533 1 9606 Homo sapiens -0.037408356931450726 GGTVADLDEQDEETVTAGGKEDEDPAKGDQSR Unmodified 3318.4608 0.46075992 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 2 1 0 1 46.323 46.323 4 1.1849E-06 12859 20230619_1880_Aki_TMTPro18x_K_F1 93.6 91.517 12683 13266 15524 10500 12858 14428 15697 12652 10564 14614 17578 12988 14020 10303 16478 14139 11633 8580.2 11769 12118 15465 10908 13621 14265 15512 13104 11339 14605 17527 13184 14516 10919 16432 13847 11156 8219.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28724000 10132 4016 9579 19372 15534 15534 1 9606 Homo sapiens -0.10573202556543038 GGTWFAGFGR Unmodified 1054.4985 0.49846366 2460 Q96ID4;B4DE93;G3V0I5;E5KNH5;P49821-2;P49821;Q53G70;H0YE81;B4DUN7;H0YD04 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 5 0 1 57.7 57.759 2 0.0092492 16965 20230619_1885_Aki_TMTPro18x_K_F5 80.455 65.919 307860 265090 306330 322010 322830 395630 361760 363270 418680 334640 337900 307410 356120 301680 326630 348800 340390 340380 284750 243130 311730 321490 335420 393620 364220 372520 419870 339120 351090 313310 361500 313910 333540 349250 325550 323390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 62839000 10133 2460 9580 19373 15535;15536 15535 2 9606 Homo sapiens -0.02660563668200666 GGTYDTYVGSGWLIK Unmodified 1615.7882 0.7882229 167 A0A024R1W3;Q96AY3;Q658U4;Q6ZME7;K7ESG6 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 2 0 1 62.052 62.062 3 6.402799999999999E-19 19514 20230619_1881_Aki_TMTPro18x_K_F2 205.96 163.41 264370 230650 264850 221710 244830 292570 290830 309650 315350 337330 320230 370300 349020 304300 376160 348010 369250 428230 244560 211100 268490 225880 257290 290930 291460 315720 320270 340310 330080 371950 356620 318480 381500 353590 353770 405670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 470770000 10134 167 9581 19374 15537 15537 1 9606 Homo sapiens 0.00496031306806799 GGVADALLYR Unmodified 1033.5556 0.55564418 2854 Q496I0;D6RIE3;D6RGV5;H0UI06;P14406;D6R9C3 COX7A2 Cytochrome c oxidase subunit 7A2, mitochondrial yes no 0 0 0 7.5 0.5 1 1 51.973 52.048 2 1.4838E-05 14485 20230619_1887_Aki_TMTPro18x_K_F7 163.15 121.04 593940 549800 636120 715270 751740 859510 853160 832880 958990 565960 615850 627870 666320 572600 648170 614230 673830 647380 549970 504480 645100 710480 774510 857290 857150 845630 956000 588900 650470 632980 677810 594670 660620 618630 644280 614630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 928170000 10135 2854 9582 19375;19376 15538;15539 15538 2 9606 Homo sapiens 0.040208588175119075 GGVAEACPNIR Unmodified 1142.5502 0.55024123 1356 Q15813-2;Q15813;A0A2R8Y5Q8;A0A2R8YHI9;A0A2R8Y7E7;A0A2R8YER9;A0A2R8YFL4;A0A2R8Y809;A0A2R8Y4V6;A0A2R8Y6Q1;A0A2R8Y784;A0A2R8Y6L2;B7Z4X8;A0A2R8Y4E7 TBCE Tubulin-specific chaperone E yes no 0 0 0 5 0 1 37.654 37.746 2 0.00021995 8583 20230619_1885_Aki_TMTPro18x_K_F5 145.72 129.05 52301 38331 44638 48704 48063 48491 50420 47926 55017 54931 56084 52309 63044 55171 52422 80872 72865 59505 48271 35194 46050 48330 49699 49053 50846 49201 55852 55072 57766 53398 63656 58135 54775 79574 69426 56794 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41478000 10136 1356 9583 19377 15540 15540 1 9606 Homo sapiens -0.015331880366375117 GGVAGGSILK Unmodified 857.49707 0.49706667 3571 P41091;Q2VIR3;Q2VIR3-2 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 1.6 0.49 2 3 46.005 46.032 2;3 9.23E-11 12587 20230619_1881_Aki_TMTPro18x_K_F2 164.96 70.653 140660 126040 159970 160210 168500 159670 177880 178920 202490 185140 212960 200180 217130 169940 200240 214590 229950 209280 130290 115630 161010 159020 174340 162010 179610 181620 205250 187220 218100 201620 220590 178700 205620 214590 219590 198900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 382520000 10137 3571 9584 19378;19379;19380;19381;19382 15541;15542;15543;15544 15544 4 9606 Homo sapiens 0.06261802243034253 GGVDHAAAFGR Unmodified 1056.5101 0.51009098 2121 B4DX01;A8K8F0;Q9HC38-2;Q9Y3E8;Q9HC38;I3L3Q4;B3KV49;B7Z403 GLOD4 Glyoxalase domain-containing protein 4 yes no 0 0 0 6.5 0.5 1 1 33.238 33.302 3 3.7298E-13 6969 20230619_1886_Aki_TMTPro18x_K_F6 182.28 158.73 48560 41169 41344 45609 50449 54993 55156 51606 59789 47599 58555 57767 56355 56205 55235 62966 65891 57244 44857 37728 42766 45828 51818 54831 55465 52860 60543 48662 60042 58169 57603 58328 56814 62833 62881 54463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234810000 10138 2121 9585 19383;19384 15545 15545 1 9606 Homo sapiens -0.01590366644882124 GGVIFSVK Unmodified 805.46979 0.46978929 4517 Q9H501;A0A087WX71;A0JLU5;Q05C10 ESF1 ESF1 homolog yes no 0 0 0 2.5 0.5 1 1 53.622 53.662 2 0.0075015 15793 20230619_1882_Aki_TMTPro18x_K_F3 107.43 69.784 127980 106260 131720 126570 164850 153360 125160 131400 164960 112040 119160 105070 108160 73089 116760 124250 88504 116480 118380 97449 133890 126520 167380 152630 129760 135220 163870 114160 123850 106010 111000 79239 117080 123560 85147 110610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139470000 10139 4517 9586 19385;19386 15546 15546 1 9606 Homo sapiens 0.05927318702663342 GGVILVSHDER Unmodified 1180.62 0.62003536 1135 B4DRU9;A0A0S2Z5L1;Q9NUQ8-2;Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes no 0 0 0 3.5 0.5 1 1 37.233 37.282 3 1.1977E-09 8443 20230619_1883_Aki_TMTPro18x_K_F4 183 121.22 82879 54855 77563 85236 106250 106550 80988 104120 101950 82839 104960 107460 95935 95431 102160 96046 127610 108500 76504 50504 79681 83818 107380 106050 83847 105900 102740 85629 107180 107590 98619 98804 105130 97240 121710 102990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129940000 10140 1135 9587 19387;19388 15547;15548 15548 2 9606 Homo sapiens 0.03695013903643485 GGVLAHLER Unmodified 950.52976 0.52976379 4437 Q9BU64 CENPO Centromere protein O yes yes 0 0 0 7 0 1 39.813 39.878 3 0.00072043 9200 20230619_1887_Aki_TMTPro18x_K_F7 105.4 76.31 57547 52760 54896 58576 55348 69878 65166 61299 67331 58697 64134 59313 65284 53211 59180 69839 66733 59865 53231 48338 56031 58836 57784 69597 65199 63158 68312 59502 65973 60029 66295 55963 60760 69329 63729 56991 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25163000 10141 4437 9588 19389 15549 15549 1 9606 Homo sapiens 0.05252009365904087 GGVPEEARPALCPGPSGSR Unmodified 1892.9163 0.91629373 3163 K7ELE9;Q66K64 DCAF15 DDB1- and CUL4-associated factor 15 yes no 0 0 1 6 0 1 39.155 39.241 3 2.9051E-10 9227 20230619_1886_Aki_TMTPro18x_K_F6 132.61 113.04 21381 17721 18183 18224 16582 20701 18306 17871 20940 22980 20055 22316 25221 20916 19834 27554 19354 22449 19748 16230 18714 18405 17428 20685 18445 18590 21173 22931 20857 22635 25315 21968 20281 27275 18544 21365 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24481000 10142 3163 9589 19390 15550 15550 1 9606 Homo sapiens 0.0055522355837638315 GGVPLVK Unmodified 668.42211 0.42211082 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 1.5 0.5 1 1 45.948 45.988 2 0.050245 12723 20230619_1880_Aki_TMTPro18x_K_F1 91.26 25.641 141730 100680 138420 130530 158610 167820 156020 137560 201300 184180 190360 194350 199910 154520 157550 209330 228600 224410 130920 92475 141130 129850 163110 166200 158820 143900 202070 184030 196200 195490 201690 163700 165150 210150 218010 213000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 600820000 10143 12 9590 19391;19392 15551 15551 1 9606 Homo sapiens 0.07463664502461143 GGVPSWFGL Unmodified 918.45995 0.45995289 713 B2R9J4;A0A024RCB2;Q16540 MRPL23 39S ribosomal protein L23, mitochondrial yes no 0 0 0 2 0.816 1 1 1 66.34 66.354 2 0.0075033 21347 20230619_1881_Aki_TMTPro18x_K_F2 89.673 67.526 12573 16338 16796 17782 16737 17814 19421 21766 19595 16944 19927 17133 20913 19153 18967 20555 20952 19441 11700 14951 16718 17851 17439 18108 19441 21827 19954 17389 20456 17478 21230 19757 19439 20569 20017 18483 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28015000 10144 713 9591 19393;19394;19395 15552 15552 1 9606 Homo sapiens -0.002538693027190675 GGVVGIK Unmodified 628.39081 0.39081069 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;A0A0M4FNU3;H3BR04;H3BUH7;H3BMQ8;H3BU78 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 1.5 0.5 1 1 43.662 43.703 2 0.0073288 11708 20230619_1880_Aki_TMTPro18x_K_F1 126.05 70.651 1923000 881890 1716200 1983000 2337600 2486800 2088000 2260700 2401600 2257800 2942300 3277000 2902000 2607300 2583300 1430800 3277900 3028100 1771700 818180 1771400 1916200 2372400 2469200 2130200 2324800 2449600 2312900 2993500 3253400 2948800 2650600 2663900 1550500 3127900 2860100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3365899999.9999995 10145 3378 9592 19396;19397 15553;15554 15553 2 9606 Homo sapiens 0.061750914683784686 GGVVNAAKEEHETDEK Unmodified 1711.8013 0.80130678 3231 O15042-2;O15042;E7ET15;E7EW00;H0Y8D9;C9JDJ7;C9J5L1 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 0 0 1 3.5 0.5 1 1 38.097 38.145 4 9.4634E-15 8839 20230619_1882_Aki_TMTPro18x_K_F3 190.24 177.76 81421 74727 75230 89543 114200 102720 96738 96733 90158 99452 100450 93065 92314 67528 83735 85838 82913 63441 75297 68512 77580 89371 114870 102810 98353 99300 92723 100120 102170 93895 93971 71483 85259 84729 79204 60565 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110100000 10146 3231 9593 19398;19399 15555 15555 1 9606 Homo sapiens -0.026121823717858206 GGWGISPR Unmodified 828.42424 0.42423608 1200 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;P67775;B3KUN1;A0A8V8TQA1;Q6I9T8;A0A8V8TRB3;B3KQ51;A0A8V8TQU8;E5RHC1;H0YC23 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes no 0 0 0 2 0.816 1 1 1 43.705 43.756 2 0.032128 11560 20230619_1881_Aki_TMTPro18x_K_F2 78.178 49.666 1013000 858620 969580 953260 1022400 1145500 1120900 1106900 1185300 1217300 1200100 1074200 1180400 888840 1169700 1147600 1187300 1086300 936530 786870 989310 957890 1060600 1143100 1126600 1136100 1204900 1219700 1229100 1091000 1203900 937280 1190400 1145800 1135100 1032800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 645500000 10147 1200 9594 19400;19401;19402 15556 15556 1 9606 Homo sapiens 0.003160932402806793 GGYFDEFGIIR Unmodified 1272.6139 0.61388734 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4;A0A8Q3WL93;A0A8Q3WLT0;A0A8Q3WL80;E7EM57;Q0PHS1;A0A8Q3WL83;Q0PHS6 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 6.5 0.5 1 1 61.839 61.885 2 6.2483E-12 18946 20230619_1886_Aki_TMTPro18x_K_F6 203.29 170.06 370060 259910 325460 410760 381710 629360 442500 446580 569270 620260 600280 722470 702430 610750 681690 724600 696890 872880 341540 239280 336010 404750 395630 614830 446460 473360 574420 620770 619830 724550 712760 639850 694690 734450 667850 826850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 663350000 10148 1464 9595 19403;19404 15557 15557 1 9606 Homo sapiens -0.011515043278677695 GGYGGGGPGYSGGSR Unmodified 1284.5483 0.54832698 1673 A0A7I2V5L7 no no 0 0 0 7 0 1 33.424 33.506 2 0.010191 6727 20230619_1887_Aki_TMTPro18x_K_F7 65.5 54.671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10149 1673 9596 19405 15558 15558 1 9606 Homo sapiens -0.0825652552084648 GGYHLVK Unmodified 772.42317 0.42317345 2119 A8K8B2;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3;D6RBM8 SRPK1 SRSF protein kinase 1 yes no 0 0 0 1.5 0.5 1 1 38.436 38.468 3 0.026182 9111 20230619_1881_Aki_TMTPro18x_K_F2 65.263 35.69 154000 104080 148700 144520 163960 153490 139700 141530 171520 150700 162150 135430 147310 126670 152800 160590 183720 129990 142210 95685 151630 142740 168300 154310 143310 145670 172540 151410 166000 138020 151130 132700 157010 159120 175110 123990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128620000 10150 2119 9597 19406;19407 15559 15559 1 9606 Homo sapiens 0.027858788713729155 GGYIGSTYFER Unmodified 1248.5775 0.57750184 305 A0A024R4T4;P61081 UBE2M NEDD8-conjugating enzyme Ubc12 yes no 0 0 0 7 0.816 1 1 1 50.007 50.085 2 6.4061E-17 13599 20230619_1887_Aki_TMTPro18x_K_F7 234.2 199.1 288310 269590 273890 298670 237500 304380 305900 320370 321590 377080 332960 351290 394470 334540 356520 426800 367740 406280 266720 246970 279090 299420 251740 307710 305070 327640 327560 377140 343940 357230 398830 350540 364220 426060 352010 385960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 421150000 10151 305 9598 19408;19409;19410 15560;15561 15560 2 9606 Homo sapiens -0.03684381224570643 GGYTSGTFR Unmodified 944.43519 0.4351947 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 5.33 3.09 1 1 1 37.096 37.112 2 1.1596E-05 8314 20230619_1888_Aki_TMTPro18x_K_F8 170.3 144.19 335950 255750 277450 271460 346550 418650 340380 338530 444390 130540 135560 120100 124560 114360 230410 142480 166550 123050 310060 234380 287760 274870 354950 410240 346490 345740 433500 143440 153270 122490 132690 119580 228400 141940 159670 117240 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 194710000 10152 1104 9599 19411;19412;19413 15562;15563;15564 15564 3 9606 Homo sapiens -0.03924549176076653 GHAAFTSDPKPTIEVSGK Unmodified 1840.9319 0.93192702 3371 V9HW90;P00390-2;P00390-3;P00390;P00390-5;P00390-4 HEL-75;GSR Glutathione reductase, mitochondrial yes no 0 0 1 8 0 1 44.637 44.656 4 5.1282E-09 11322 20230619_1888_Aki_TMTPro18x_K_F8 124.68 117.46 166600 80620 138660 147750 186080 176130 170220 189400 198570 191540 178570 171450 191190 155160 131000 210980 173020 204960 153440 74519 143910 143980 188980 176210 173450 192510 200000 192830 184570 174500 191860 163600 137050 210520 165360 194620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 369260000 10153 3371 9600 19414 15565 15565 1 9606 Homo sapiens 0.04509833347060521 GHAFAQCPK Unmodified 1014.4705 0.47053435 4595 Q9NUD5;Q9NUD5-2 ZCCHC3 Zinc finger CCHC domain-containing protein 3 yes no 0 0 0 1 0 1 33.954 33.954 3 0.042161 7581 20230619_1880_Aki_TMTPro18x_K_F1 48.036 39.081 16315 12790 15820 17940 17620 18542 20358 18343 19595 19780 23429 17965 21839 16088 19694 23288 20723 18572 15078 11752 16153 17696 18219 18698 20342 18798 20153 19857 23751 18288 22218 17044 20140 23013 19802 17698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10783000 10154 4595 9601 19415 15566 15566 1 9606 Homo sapiens -0.03612209919936049 GHAGSVDSIAVDGSGTK Unmodified 1556.7431 0.74306362 4009 Q9GZL7;Q53T99 WDR12 Ribosome biogenesis protein WDR12 yes no 0 0 0 4 0 1 39.61 39.652 3 4.16E-09 9424 20230619_1883_Aki_TMTPro18x_K_F4 123.72 103.95 26984 17783 28920 29091 33321 35962 30280 30267 32878 34307 36985 36417 32239 30048 32077 32510 41384 38731 24936 16384 29281 28521 34169 35700 30800 31421 33523 34518 37544 36650 33073 31333 33135 32979 39488 36730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63386000 10155 4009 9602 19416 15567 15567 1 9606 Homo sapiens -0.01303819226404812 GHALLIDCR Unmodified 1053.5389 0.53894826 3624 V9HWE7;P51570;Q6ZP37;Q71UH7 HEL-S-19;GALK1 Galactokinase yes no 0 0 0 6.5 0.5 1 1 37.61 37.68 3 4.8104E-05 8336 20230619_1887_Aki_TMTPro18x_K_F7 128.36 104.21 101920 56939 90391 104860 142260 127140 116460 111210 161960 92567 106990 92916 94034 78869 108660 88395 112490 77797 93967 52590 93609 102140 142850 126500 120240 114230 160020 94721 111720 93895 97103 82309 110320 88170 107360 74131 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118890000 10156 3624 9603 19417;19418 15568;15569 15569 2 9606 Homo sapiens 0.014320346599106415 GHAVGDIPGVR Unmodified 1076.5727 0.57269123 2062 D6RD47;A8K517;P62266 RPS23 40S ribosomal protein S23 yes no 0 0 0 6 0.816 1 1 1 36.302 36.375 3 7.9781E-07 8053 20230619_1886_Aki_TMTPro18x_K_F6 163.65 142.42 207570 95883 188960 204840 213690 204470 214010 202470 287420 191370 220290 227550 257140 201070 179830 249880 260910 240770 191270 88872 193920 197710 219940 206640 217960 206790 285680 195310 230720 228570 257590 210900 189070 249610 248710 228850 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2433300000 10157 2062 9604 19419;19420;19421 15570;15571;15572 15571 3 9606 Homo sapiens 0.03746779423318003 GHAVNLLDVPVPVAR Unmodified 1555.8835 0.88346068 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;O00429-7;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402 DNM1L Dynamin-1-like protein no no 0 0 0 2 0 1 53.151 53.184 3 7.6808E-11 15796 20230619_1881_Aki_TMTPro18x_K_F2 160.46 139.09 41418 29664 38604 51080 41744 48787 54760 41821 50774 41784 46652 47599 49754 42497 45259 59293 46540 52531 38246 27338 39587 49736 43462 49312 54292 43271 51750 42434 48211 47924 50471 44876 46254 58892 44558 49944 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106480000 10158 3212;3213 9605 19422 15573 15573 1 9606 Homo sapiens 0.1277542928849016 GHCGPVYSTR Unmodified 1132.5084 0.50837642 3308 O75529 TAF5L TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L yes yes 0 0 0 8 0 1 27.56 27.59 3 0.0030828 4820 20230619_1888_Aki_TMTPro18x_K_F8 76.85 69.204 9041 5859.6 9749.7 11203 14848 14697 14175 12441 19655 9712.5 9950.3 11358 10385 10012 10310 8352.7 12424 9214.5 8354.6 5411 9931.1 10908 14994 14538 14482 12798 19297 10036 10695 11401 10597 10278 10589 8478.5 11845 8754.6 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3530000 10159 3308 9606 19423 15574;15575 15574 2 9606 Homo sapiens -0.052577437251329684 GHDEREHPFLVK Unmodified 1462.7317 0.73171107 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 5.5 0.5 1 1 36.239 36.315 5 0.035787 8025 20230619_1885_Aki_TMTPro18x_K_F5 62.14 49.78 161270 83316 116850 127470 156320 100970 159660 182550 167740 182470 202620 183380 205090 173560 136970 237520 150590 213870 148430 76793 122970 124810 158860 106110 161090 180750 171890 184300 206120 186010 205960 182710 141830 236020 144390 203150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193080000 10160 3758 9607 19424;19425 15576 15576 1 9606 Homo sapiens 0.01885448260782141 GHDLNEDGLVSWEEYK Unmodified 1889.8432 0.84317159 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-10;O43852-6;O43852-5;O43852-13;O43852-11;O43852-14 CALU Calumenin yes no 0 0 0 3 1.41 1 1 1 1 1 55.744 55.771 3 2.3944E-11 16684 20230619_1882_Aki_TMTPro18x_K_F3 160.8 149.53 346320 232020 269470 338380 300560 337510 380830 356830 391040 434540 452790 462090 497490 434170 431730 536950 442490 606970 319280 213440 281080 332810 312050 341680 379550 365370 400450 435750 463680 467040 503210 454300 441420 541480 424410 575160 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 814040000 10161 2386 9608 19426;19427;19428;19429;19430 15577;15578;15579;15580 15577 4 9606 Homo sapiens -0.06615626683242226 GHEDDSYEAR Unmodified 1177.4636 0.46359429 1600 Q6DHZ8;B2RBM8;A0A669KBJ7;Q9H2P0;A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein yes no 0 0 0 1 0 1 23.478 23.478 3 6.7615E-05 3918 20230619_1880_Aki_TMTPro18x_K_F1 135.86 122.2 1792.8 0 2604.3 2054 3866.5 3158 3536.8 4795.8 2302.9 2641 2769.3 4037.2 3478 3882.8 3167.1 2037.8 4129.7 3585.9 1653.6 0 2593.1 1918.5 3892.4 3143.6 3550.7 4722.2 2438.4 2822.3 2860.7 4023.8 3519.3 3909.9 3272 2169.1 3938.2 3391.5 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1560600 10162 1600 9609 19431 15581 15581 1 9606 Homo sapiens -0.11803896057494967 GHEEFPLDGR Unmodified 1155.5309 0.530886 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 0 1.5 0.5 1 1 38.204 38.235 3 1.3388E-05 9030 20230619_1881_Aki_TMTPro18x_K_F2 120.65 111.92 39748 39859 34489 50154 56541 47295 56922 51957 58672 51724 63152 64326 57985 53967 47928 59752 58488 58749 36765 36552 35892 49748 56874 48190 57389 52782 59819 52672 64354 64388 58901 56279 49563 59870 55861 55810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130060000 10163 3610 9610 19432;19433 15582 15582 1 9606 Homo sapiens -0.04065821055860397 GHEENGDVVTEPQVAEK Unmodified 1836.849 0.84898525 902 A0A090N7X1;A0A090N7Y2;Q9UG63;Q9UG63-2;C9JHK9;C9JZV3 ABCF2 ATP-binding cassette sub-family F member 2 yes no 0 0 0 2 0 1 39.997 40.067 3 0.00032783 9834 20230619_1881_Aki_TMTPro18x_K_F2 83.252 66.945 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10164 902 9611 19434 15583 15583 1 9606 Homo sapiens -0.03596528171601676 GHEFYNPQK Unmodified 1118.5145 0.51450765 3757 P78406;Q5J8M4 RAE1 mRNA export factor yes no 0 0 0 6.5 0.5 1 1 38.148 38.218 3 0.00084559 8789 20230619_1886_Aki_TMTPro18x_K_F6 101.25 82.813 117110 53017 86892 116090 133070 110050 119600 133520 172440 129770 157750 159930 170380 143710 117220 169640 148840 154720 107760 49168 91606 111850 134090 112260 122980 134660 171960 132330 163010 160520 170980 150100 122170 169080 142150 147090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 307980000 10165 3757 9612 19435;19436 15584;15585 15584 2 9606 Homo sapiens -0.04000902221969227 GHEGDFLIR Unmodified 1042.5196 0.51959303 1094 A0A0S2Z4E4;B2R6S4;A0A0S2Z4Y3;P16333;C9JAB9;P16333-2 NCK1 Cytoplasmic protein NCK1 yes no 0 0 0 3.5 0.5 1 1 40.57 40.62 3 3.1769E-08 9807 20230619_1883_Aki_TMTPro18x_K_F4 174.41 120.2 78337 47239 78800 77622 84081 81750 90989 92943 118240 98193 103050 108340 106680 91248 84048 102600 93922 109760 72321 43544 80073 75935 87051 82594 92178 94306 118250 99289 106600 108920 107700 95292 86519 103270 89878 104120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69336000 10166 1094 9613 19437;19438 15586;15587 15587 2 9606 Homo sapiens 3.401640651645721E-05 GHELDVR Unmodified 824.41407 0.41406533 4702 Q9Y263;E5RIM3 PLAA Phospholipase A-2-activating protein yes no 0 0 0 2 0 1 29.412 29.484 2 0.072964 5542 20230619_1881_Aki_TMTPro18x_K_F2 75.854 45.136 11126 3073.8 10962 10619 14009 11040 11978 14102 15858 13912 16241 16134 14276 12559 12273 11319 13707 16740 10244 2891.9 11186 10100 14227 11197 12321 14182 15944 14134 16553 16148 14539 13014 12590 11702 13122 15831 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4534300 10167 4702 9614 19439 15588 15588 1 9606 Homo sapiens -0.005165144849456738 GHELVLANIAESDAGVYTCHAANLAGQR Unmodified 2936.4199 0.41990234 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-5;Q13308-3;Q59FV9;Q86X91;Q9NSQ6;H0Y8F1;H7C5L0 PTK7;DKFZp434L0319 Inactive tyrosine-protein kinase 7 yes no 0 0 0 7.5 0.5 1 1 54.929 54.994 4 2.4002E-49 15719 20230619_1888_Aki_TMTPro18x_K_F8 222.57 219 20866 16609 22261 23018 20020 22790 24365 23917 26978 26130 28297 31911 28673 25455 22997 29540 22826 33404 19302 15259 22470 22715 21090 23082 24402 24422 27384 26461 29005 31902 28984 26683 23517 29816 21915 31648 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181900000 10168 3847 9615 19440;19441 15589 15589 1 9606 Homo sapiens 0.0291491896214211 GHEVTLVSR Unmodified 996.53524 0.53524309 4585 Q9NRG7 SDR39U1 Epimerase family protein SDR39U1 yes yes 0 0 0 5.5 0.5 1 1 32.43 32.489 3 0.00069619 6581 20230619_1885_Aki_TMTPro18x_K_F5 106.2 71.667 42393 30034 38995 43040 51692 53511 55491 56148 66380 43952 49961 51626 53551 46278 53340 46303 53055 49704 39141 27616 40115 42524 52780 53364 56038 56842 66279 45345 52212 51884 54540 47911 54186 46753 50742 47186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29440000 10169 4585 9616 19442;19443 15590 15590 1 9606 Homo sapiens 0.03683688157718734 GHFEAFGTLTDCVVVVNPQTK Unmodified 2318.1365 0.13651684 3836 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 8 0 1 59.092 59.134 4 3.7055E-16 17445 20230619_1888_Aki_TMTPro18x_K_F8 152.59 141.65 56267 35430 47732 47661 46713 47870 49107 44993 56735 63777 52269 50010 67511 53704 52061 65773 52893 60678 51889 32572 49172 47130 48668 48335 49614 46674 57271 63037 54480 51520 67655 55942 53336 65578 50654 57658 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70509000 10170 3836 9617 19444 15591 15591 1 9606 Homo sapiens 0.030174043753049773 GHFECPPYNSSTIR Unmodified 1663.7413 0.74128948 1830 A0A8V8TMX5;Q9UK59;A0A8V8TMH0;A0A8V8TNX0;A0A8V8TMF7 DBR1 Lariat debranching enzyme yes no 0 0 0 6.5 0.5 1 1 39.774 39.851 3 1.1555E-11 9146 20230619_1887_Aki_TMTPro18x_K_F7 142.85 136.41 23189 13484 19027 23533 21675 21684 23018 25962 28249 26707 23288 23773 27774 18955 21161 26815 26186 26768 21372 12442 19738 22900 22340 22156 23295 26239 28299 26855 24320 24102 27864 20154 21943 26798 25010 25423 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154410000 10171 1830 9618 19445;19446 15592 15592 1 9606 Homo sapiens -0.06403151515996797 GHFEEEK Unmodified 874.3821 0.38209649 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 2 0.816 1 1 1 33.753 33.794 3 0.00023738 7177 20230619_1881_Aki_TMTPro18x_K_F2 170.32 109.36 233540 72358 285000 288520 454610 339200 320170 417450 325230 212180 397590 436890 319720 346410 366250 141290 368030 358070 215500 68284 287570 273930 453700 340830 331120 415340 333380 232190 401500 429940 331390 349270 370420 158260 352040 337840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 223900000 10172 349;3906 9619 19447;19448;19449 15593;15594 15594 2 9606 Homo sapiens -0.0601192695876307 GHFGPIHCVR Unmodified 1178.5767 0.57673075 4727 Q9Y3F4;Q9Y3F4-2;B0AZV0;H0YH33 STRAP Serine-threonine kinase receptor-associated protein yes no 0 0 0 2.5 0.5 1 1 31.808 31.879 3 4.267E-07 6309 20230619_1882_Aki_TMTPro18x_K_F3 172.21 151.34 56543 27805 52950 58063 63836 57682 57355 64420 73736 62178 73361 65854 70812 57781 59011 59002 65886 65826 52126 25751 54260 56100 65206 58490 58737 65270 74139 63081 75102 66433 71771 59956 60592 59664 62973 62450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98473000 10173 4727 9620 19450;19451 15595;15596 15596 2 9606 Homo sapiens -0.005414543546294226 GHFGPINSVAFHPDGK Unmodified 1678.8216 0.82158871 1678 Q13347;A0A7I2YQF8;Q5U0F4;Q53HU7;A0A7I2V613;A0A7I2V607;A0A7I2V3N2;A0A7I2V2M3;A0A7I2V640;A0A7I2YQI2;A0A7I2V3U3;A0A7I2V5V8;A0A7I2YQU2;A0A7P0MRT9;A0A7I2V685;A0A7I2YQC8;A0A7I2YQT9;A0A7I2V4C2;Q9P1D9 EIF3I Eukaryotic translation initiation factor 3 subunit I yes no 0 0 0 1.5 0.5 1 1 46.411 46.451 4 5.441899999999999E-19 12930 20230619_1880_Aki_TMTPro18x_K_F1 196.22 169.41 71610 28106 53671 66439 63658 50871 67780 72348 77634 81051 76697 68489 77641 65422 53760 78607 61614 82075 65863 26129 56216 63682 65342 53099 68412 72649 78537 81035 78685 70018 78068 68311 55669 78898 59017 77843 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 422880000 10174 1678 9621 19452;19453 15597 15597 1 9606 Homo sapiens 0.009330778693538377 GHFNIQPNK Unmodified 1053.5356 0.53557744 3087 H7C0R7;Q9UHQ9 CYB5R1 NADH-cytochrome b5 reductase 1 yes no 0 0 0 2 0 1 39.207 39.274 3 0.0036921 9485 20230619_1881_Aki_TMTPro18x_K_F2 69.423 59.07 66484 38138 57966 74406 90179 82808 79471 85672 111450 61946 77548 79364 75672 73031 66288 76865 90709 77913 61296 35251 60159 72190 90777 83135 81696 86684 110210 64503 81071 79605 76950 75690 68971 77221 86465 74038 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46665000 10175 3087 9622 19454 15598 15598 1 9606 Homo sapiens 0.010951078775406131 GHGAPPGGPGPR Unmodified 1055.5261 0.52607539 45 Q5VVH9;A0A024QZL0;Q96D05;Q96D05-2 C10orf35 Uncharacterized protein C10orf35 yes no 0 0 0 6 0 1 23.164 23.205 3 7.4452E-05 3843 20230619_1886_Aki_TMTPro18x_K_F6 91.549 64.435 22878 14227 25963 26135 44207 35182 33866 34551 33082 21926 34773 38221 27161 30428 37919 21918 39212 34335 21147 13133 26377 25516 44071 34886 34721 35002 33768 23342 35313 37784 28524 31166 38348 22916 37472 32498 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9964900 10176 45 9623 19455 15599 15599 1 9606 Homo sapiens 0.0005333959204563143 GHGECPTTENTETFIR Unmodified 1847.8108 0.81082561 2228 B4DIQ0;B2R623;O60942-3;O60942-4;O60942-2;O60942;B4DSJ8 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes no 0 0 0 3 0 1 38.212 38.266 3 5.1971E-11 8894 20230619_1882_Aki_TMTPro18x_K_F3 150.05 139.58 14661 12025 14817 16042 15005 19860 14398 15946 20846 17171 20135 20282 19497 19441 17636 18942 22276 20867 13558 11042 15051 15914 15593 19691 14759 16591 20829 17398 20661 20420 19855 20043 18228 19151 21259 19805 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27162000 10177 2228 9624 19456 15600 15600 1 9606 Homo sapiens -0.07916737357936654 GHGECVEYVK Unmodified 1176.5234 0.52335778 3243 O15379;O15379-2;Q9H368;E7ESJ6 HDAC3 Histone deacetylase 3 yes no 0 0 0 3 0 1 36.775 36.83 3 0.0005297 8296 20230619_1882_Aki_TMTPro18x_K_F3 100.48 84.937 27756 14927 23456 25075 29594 30994 27457 29204 36415 31181 41138 37110 40173 31524 30809 35287 41865 36281 25577 13771 24284 24551 30211 30839 28092 30004 36751 31599 41898 37237 40573 32910 32125 35446 39911 34470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33220000 10178 3243 9625 19457 15601 15601 1 9606 Homo sapiens -0.057842966478119706 GHGIPFQDGHSCLR Unmodified 1579.7314 0.73139349 2872 E5KSY5;Q96RR1-3;Q96RR1-2;Q96RR1 PEO1 Twinkle protein, mitochondrial yes no 0 0 0 7 0 1 36.362 36.429 4 1.96E-05 7877 20230619_1887_Aki_TMTPro18x_K_F7 116.06 110.03 14103 10912 15126 13656 16193 17171 18010 17269 22415 17800 17007 17966 19273 15262 18242 18890 21668 22480 13044 10015 15289 13617 16781 17099 18183 17646 22362 17974 17811 18137 19548 16037 18759 19121 20704 21310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9574500 10179 2872 9626 19458 15602 15602 1 9606 Homo sapiens -0.03528294730699599 GHGRPAAAVAQPLEPGPGPPER Unmodified 2160.1188 0.11883336 3895 Q14681 KCTD2 BTB/POZ domain-containing protein KCTD2 yes yes 0 0 1 6 0 1 35.315 35.368 4 0.00014578 7787 20230619_1886_Aki_TMTPro18x_K_F6 76.027 68.302 8846.5 6069.6 10601 9012.2 11830 12900 12687 9601.8 14781 10479 14256 14321 11541 12000 12679 12245 16474 14498 8185.3 5584.1 10633 8907.9 12209 12671 12799 10070 14896 10674 14535 14287 11939 12458 13079 12431 15712 13753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17572000 10180 3895 9627 19459 15603 15603 1 9606 Homo sapiens 0.08517869955312563 GHGTYMGEEK Oxidation (M) 1123.4604 0.46042317 1922 A3KFL5;Q13868;B4E001;A0A8I5KV47;A0A8I5KVY3;A3KFL2;Q13868-3;Q13868-2;A0A8I5QL34;A0A8I5KRS5;A0A8I5KYK9 EXOSC2 Exosome complex component RRP4 yes no 0 1 0 3 0 1 29.81 29.904 3 0.0020991 5578 20230619_1882_Aki_TMTPro18x_K_F3 79.489 68.219 11661 11271 16931 17366 20913 16395 15877 20557 14375 14302 20092 21535 13255 15794 16916 9752.7 21953 20640 10835 10361 16812 17023 21199 16757 16280 20539 14952 14992 20063 21322 13952 16152 17373 10532 20947 19494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3700500 10181 1922 9628 19460 15604 15604 1234 1 9606 Homo sapiens -0.09636862435831972 GHHVWVTK Unmodified 962.50863 0.50863441 4505 Q9H2W6 MRPL46 39S ribosomal protein L46, mitochondrial yes yes 0 0 0 2 0 1 33.973 34.03 3 0.022234 7281 20230619_1881_Aki_TMTPro18x_K_F2 72.485 37.677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10182 4505 9629 19461 15605 15605 1 9606 Homo sapiens 0.025880440570404062 GHIISDGGCSCPGDVAK Unmodified 1728.756 0.75595326 3057 Q9P2T1;Q6PKC0;Q9P2T1-3;H0YMB3;Q9P2T1-2;H0YNJ6;H0YLV5;Q86SZ5;H0YKE1;H0YLB8;H0YNS9 GMPR2 GMP reductase 2;GMP reductase yes no 0 0 0 4 0 1 40.202 40.244 3 3.5588E-05 9651 20230619_1883_Aki_TMTPro18x_K_F4 95.067 90.519 21395 8178.7 15504 19623 22355 18228 17940 21971 22450 19172 27384 30185 23995 20573 21669 27666 23367 29975 19673 7607.1 16356 18836 22532 18619 18497 22110 22793 19852 27729 29825 24485 21905 22207 27797 22387 28422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32914000 10183 3057 9630 19462 15606 15606 1 9606 Homo sapiens -0.07927447430165557 GHIIVDEFQNTNVK Unmodified 1612.8209 0.82092001 3371 V9HW90;P00390-2;P00390-3;P00390;P00390-5;P00390-4 HEL-75;GSR Glutathione reductase, mitochondrial yes no 0 0 0 6 0.816 1 1 1 49.113 49.19 3 8.9116E-29 13521 20230619_1886_Aki_TMTPro18x_K_F6 247.67 211.37 183040 78057 152290 193230 168090 183260 198630 208680 223170 211120 194650 222800 263550 193510 141100 284090 236750 259800 168510 72587 157760 185300 174230 186430 199240 211500 224930 213560 204100 224730 260870 205470 151710 282210 225760 246940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 852810000 10184 3371 9631 19463;19464;19465 15607;15608 15607 2 9606 Homo sapiens 0.03902238429645877 GHLENNPALEK Unmodified 1220.6149 0.61494998 691 P05388;A8K4Z4;A0A024RBS2;F8VU65;P05388-2;Q53HW2;Q53HK9;F8VWS0;Q6NSF2;F8VPE8;G3V210;F8VW21;F8VRK7;F8VQY6;Q8NHW5;F8VZS0;F8VS58;F8VWV4 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 4.5 1.12 1 1 1 1 38.687 38.754 3 0.00039433 9006 20230619_1885_Aki_TMTPro18x_K_F5 96.745 61.203 98273 71983 95313 106620 142590 120020 109030 132760 155320 123750 180140 175750 170460 155940 125770 183290 196760 169070 90788 66205 97788 104980 143260 120690 113380 134450 156450 127170 183100 175540 172290 162830 132910 182800 187380 160830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4223399999.9999995 10185 691 9632 19466;19467;19468;19469 15609 15609 1 9606 Homo sapiens 0.013467100410252897 GHLLDSFAR Unmodified 1014.5247 0.52467841 4578 Q9NQW7-4;Q9NQW7-3;Q5T6H7;B3KSI7;Q9NQW7-2;Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 8 0 1 44.469 44.488 3 1.0208E-12 11278 20230619_1888_Aki_TMTPro18x_K_F8 204.36 161.24 44877 23331 39650 39814 41800 34855 48542 52646 56203 45180 49214 48859 58504 42376 44938 58567 45138 49676 41362 21534 40736 38794 43356 36032 48794 52340 56514 46166 51215 49255 58717 44798 46024 58057 43218 47260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139250000 10186 4578 9633 19470 15610 15610 1 9606 Homo sapiens 0.017997055032765275 GHNGWVTQIATTPQFPDMILSASR Oxidation (M) 2642.2911 0.29112 2907 P63244;E9KL35;J3KPE3;D6RAC2;D6REE5;D6RHH4;D6RFZ9;D6RBD0;E9PD14;D6RAU2;B4E0C3;B4DWC6;D6RGK8;D6R909;D6RHJ5;D6RDI0;I3QNU9 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 1 0 3 0 1 60.893 60.922 3 2.3752E-05 18770 20230619_1882_Aki_TMTPro18x_K_F3 81.553 71.086 13680 10158 13934 14675 12890 14475 17317 14745 18281 16245 16828 17056 17266 15774 17840 20013 16010 18184 12644 9338.9 14125 14443 13588 14654 17227 15095 18504 16367 17360 17242 17641 16529 18043 19936 15351 17283 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11290000 10187 2907 9634 19471 15611;15612 15611 1726 2 9606 Homo sapiens 0.03566608789833481 GHNQPCLLVGSGR Unmodified 1393.6885 0.68846605 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 1.5 0.5 1 1 35.984 36.013 3 9.0005E-09 8049 20230619_1881_Aki_TMTPro18x_K_F2 128.41 105.8 65035 40239 64845 61133 69260 66179 80903 67940 65643 81906 81391 83212 102960 79459 74965 95982 95381 86298 60043 37049 65930 60084 71762 66585 80418 69690 68465 82036 83713 84301 103010 82985 77958 95591 91000 82102 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 442350000 10188 2980 9635 19472;19473 15613;15614 15614 2 9606 Homo sapiens 0.007369352118757888 GHPDLQGQPAEEIFESVGDR Unmodified 2180.0134 0.013424818 193 Q53FS4;B2R774;A0A024R2A7;P49257 LMAN1 Protein ERGIC-53 yes no 0 0 0 2 0 1 54.634 54.658 3 4.5221E-45 16384 20230619_1881_Aki_TMTPro18x_K_F2 255.24 213.83 41646 29185 44388 47081 40928 49547 41882 44870 49384 45456 51407 51781 56457 48438 54225 62565 61129 54293 38495 26876 44827 46080 42849 49772 42438 46183 49959 46114 52879 52206 57365 50801 55603 62162 58374 51680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 172760000 10189 193 9636 19474 15615;15616 15615 2 9606 Homo sapiens -0.02938135751628579 GHPEFSTNR Unmodified 1043.4785 0.4784565 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 4 0.816 1 1 1 28.933 29.015 3 4.3562E-05 5168 20230619_1883_Aki_TMTPro18x_K_F4 132.01 105.63 95032 60883 87075 101870 123740 128190 119060 122200 148800 97419 107020 94441 95507 89000 95167 94750 117150 97971 87693 56117 89758 99771 125490 127430 121180 124560 148080 99800 111190 95889 97923 92267 97980 95319 111740 93090 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 121350000 10190 1213 9637 19475;19476;19477 15617;15618;15619 15618 3 9606 Homo sapiens -0.04154359398808083 GHPEPTISWK Unmodified 1150.5771 0.57710791 867 A0A087WZ85;A0A0A0MSX4;Q1RMC8;Q2M1J3;Q9Y6N7-6;Q9Y6N7-5;Q9Y6N7-4;Q9Y6N7-3;Q9Y6N7;Q9Y6N7-2 ROBO1 Roundabout homolog 1 yes no 0 0 0 8 0 1 44.436 44.455 3 0.021544 11267 20230619_1888_Aki_TMTPro18x_K_F8 52.79 38.555 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10191 867 9638 19478 15620 15620 1 9606 Homo sapiens 0.007842438462375867 GHPFFEGVDWEHIR Unmodified 1724.8059 0.80593865 4707 Q9Y2H1-2;Q9Y2H1;A0A024RAW5;B7Z8G6;B4E3T8 STK38L Serine/threonine-protein kinase 38-like yes no 0 0 0 6 0 1 52.716 52.794 4 7.0472E-12 15120 20230619_1886_Aki_TMTPro18x_K_F6 186.16 164.32 31181 27215 32088 31437 29708 36784 41861 33967 40135 37059 36458 36952 38116 31424 33708 43040 40609 46208 28851 24947 32495 31482 31383 36720 41427 34998 40830 37291 37659 37340 38643 33225 34789 43209 38826 43834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35348000 10192 4707 9639 19479 15621 15621 1 9606 Homo sapiens -0.027472086476791446 GHPRPPGPPGDTR Unmodified 1339.6745 0.67453054 1315 A0A1W2PPD9;V9H1L1;Q9H224 yes no 0 0 1 8 0 1 23.232 23.274 4 6.173E-05 3848 20230619_1888_Aki_TMTPro18x_K_F8 94.023 77.821 23368 16929 22776 21423 20230 22473 24083 24123 25607 29281 27550 20093 29242 19035 18144 40034 32556 26353 21587 15544 23140 21288 21319 22683 24116 24659 26101 29027 28182 20840 29240 20795 19561 39054 30967 25198 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17169000 10193 1315 9640 19480 15622 15622 1 9606 Homo sapiens 0.018280257750802775 GHPVSTLSR Unmodified 952.50903 0.50902834 4219 Q8IZH2-2;Q8IZH2;H7C5E4 XRN1 5'-3' exoribonuclease 1 yes no 0 0 0 8 0 1 27.527 27.556 3 0.00069143 4811 20230619_1888_Aki_TMTPro18x_K_F8 93.649 80.057 9718.6 6295.9 10835 9995.6 13515 12723 11531 14238 14644 4781.8 7297.3 8381.7 6341.4 4827.9 7028.8 4383.5 7987.1 6802.8 8983.4 5798.7 10946 9826.5 13757 12690 11841 14180 14415 5459.1 7799.9 8226.2 6535.9 5076.8 7172.5 4556.7 7624.6 6440.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3744600 10194 4219 9641 19481 15623 15623 1 9606 Homo sapiens 0.030874189862515777 GHQDLDPDNEGELR Unmodified 1593.7019 0.70192708 270 A0A024R3W5;Q9ULF5 SLC39A10 Zinc transporter ZIP10 yes no 0 0 0 1 0 1 36.019 36.019 3 1.7644E-08 8373 20230619_1880_Aki_TMTPro18x_K_F1 134.9 114.48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10195 270 9642 19482 15624 15624 1 9606 Homo sapiens -0.07117580265867218 GHQFSCVCLHGDR Unmodified 1571.6722 0.67216406 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 7 0.816 1 1 1 33.218 33.261 4 1.5608E-15 6619 20230619_1887_Aki_TMTPro18x_K_F7 169.17 159.64 86198 39912 80075 79215 89770 86721 80472 87798 89022 88030 93384 98255 94486 84279 79654 90610 103970 109650 79442 36948 81964 76818 92153 87112 81996 89608 90414 89250 95675 98785 95740 87742 82660 91987 99279 103920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 140230000 10196 1661 9643 19483;19484;19485 15625;15626 15626 2 9606 Homo sapiens -0.09080514016568486 GHQLLSADVDIK Unmodified 1294.6881 0.68811492 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;A0A994J5C5;A0A994J855;A0A994J5Y2;A0A994J7T3 NSF Vesicle-fusing ATPase yes no 0 0 0 5.5 0.5 1 1 47.425 47.503 3 5.7593E-07 12809 20230619_1886_Aki_TMTPro18x_K_F6 148.62 112.28 233870 134620 217410 242830 239550 249570 258050 251410 290110 254490 295240 275140 316090 261340 258450 272650 290580 319970 215720 124280 222700 236250 247500 251760 260100 256860 293810 257750 303400 278020 319150 270760 265680 276430 277920 303300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 972240000 10197 1435 9644 19486;19487 15627;15628 15628 2 9606 Homo sapiens 0.052558387636508996 GHQMLVK Oxidation (M) 827.43236 0.43235793 3142 J3QK89;Q8IWX8;Q59ET1;B4DL82;B4DPM4 CHERP Calcium homeostasis endoplasmic reticulum protein yes no 0 1 0 8 0 1 32.217 32.222 3 0.013765 6371 20230619_1888_Aki_TMTPro18x_K_F8 80.18 23.076 50844 17490 46399 56315 77308 59676 60531 74840 86427 38972 44882 42585 42341 40660 51073 37437 46969 32174 46810 16389 47994 53652 77259 60410 62788 74404 84786 41487 47893 43036 43758 41800 51472 37438 44876 30669 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30553000 10198 3142 9645 19488 15629 15629 1825 1 9606 Homo sapiens 0.011739041654095672 GHQQLYWSHPR Unmodified 1407.6796 0.67961592 3711 P62273;A0A2R8Y851;P62273-2 RPS29 40S ribosomal protein S29 yes no 0 0 0 2 0.816 1 1 1 32.373 32.419 4 2.2818E-23 6602 20230619_1881_Aki_TMTPro18x_K_F2 212.28 170.88 92043 44351 75361 86745 101860 82470 101570 107200 115290 83174 84206 75087 96591 77723 72381 87079 80320 74377 84764 41037 78378 84014 103510 84284 102820 107140 115370 85136 88317 76753 97019 80592 74544 86617 76732 70800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1322800000 10199 3711 9646 19489;19490;19491 15630;15631 15630 2 9606 Homo sapiens -0.007916703623322974 GHSCYRPR Unmodified 1031.4719 0.47193133 1910 Q96DV6;A2A3R6;P62753;A2A3R5;Q9BZU1;D3DRJ5 RPS6 40S ribosomal protein S6 yes no 0 0 1 1.5 0.5 1 1 22.979 23.014 3 0.00026614 3727 20230619_1880_Aki_TMTPro18x_K_F1 117.04 105.19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10200 1910 9647 19492;19493 15632;15633 15632 2 9606 Homo sapiens -0.04254575831191687 GHSLSDGLEEVQK Unmodified 1397.6787 0.67867245 2346 B7Z9F3;B3KM74;O75431-2;O75431;C9JNK6;C9JAZ1 MTX2 Metaxin-2 yes no 0 0 0 3.5 0.5 1 1 44.186 44.244 3 1.1984E-15 11395 20230619_1883_Aki_TMTPro18x_K_F4 203.11 184.84 172490 106370 146350 181500 197050 205200 205030 194580 235570 185650 230370 233270 236050 184920 180660 243070 219950 238420 159050 98084 151830 177260 200870 205370 207130 199340 237850 189630 236800 233130 238020 195440 187210 242880 210190 226430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 263250000 10201 2346 9648 19494;19495 15634;15635 15635 2 9606 Homo sapiens -0.004259743125203386 GHSVLPLEEAVEGFK Unmodified 1610.8304 0.83042206 1032 A0A0G2JIZ4;Q59EC6;A0A1U9X8R9;P14373-2;P14373 TRIM27 Zinc finger protein RFP yes no 0 0 0 6 0 1 59.779 59.84 3 0.021716 18080 20230619_1886_Aki_TMTPro18x_K_F6 54.393 33.73 39360 34007 37069 38864 41434 43330 48532 46507 45947 50439 46050 41994 50672 39552 44660 54223 45806 47027 36390 31171 37927 38924 42849 43563 48436 47389 46999 50492 47423 42959 51258 41671 45637 53822 43824 44738 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27413000 10202 1032 9649 19496 15636 15636 1 9606 Homo sapiens 0.04944006715163596 GHTGERPYACADCGK Unmodified 1677.6988 0.69877274 34 B2RDP4;A8K1I4;A0A024QZD9;Q96K58;Q96K58-2 ZNF668 Zinc finger protein 668 yes no 0 0 1 5 0 1 30.706 30.783 4 2.7652E-07 5949 20230619_1885_Aki_TMTPro18x_K_F5 128.22 117.37 15043 5801.1 10359 13702 17334 14518 16676 14462 19341 20948 18860 16073 20627 15802 11077 21683 17354 18429 13828 5393.7 11034 13180 17413 14617 16920 14953 19553 20676 19416 16539 20534 16629 11838 21480 16551 17534 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25893000 10203 34 9650 19497 15637 15637 1 9606 Homo sapiens -0.11296869915872776 GHTQDTNTFFLCR Unmodified 1595.7151 0.71507473 4254 Q8NFF5-2;Q8NFF5;Q8NFF5-3;Q5T196;B3KQW9 FLAD1 FAD synthase;Molybdenum cofactor biosynthesis protein-like region;FAD synthase region yes no 0 0 0 7.5 0.5 1 1 44.006 44.057 3 9.399299999999999E-46 11112 20230619_1888_Aki_TMTPro18x_K_F8 294.81 279.42 69167 38015 64949 75363 75868 85227 84407 87501 104070 64744 61308 57471 68260 53739 54474 61088 59165 59985 63793 35154 66567 73097 78215 85403 85178 88609 103090 66501 65179 58575 68781 55975 55931 61195 56569 56983 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130120000 10204 4254 9651 19498;19499 15638 15638 1 9606 Homo sapiens -0.058954206874659576 GHTVTEPIQPLEPELPGEGQPEAR Unmodified 2580.282 0.2819951 2114 A8K818;O15446;O15446-2 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 0 0 0 2 0 1 50.485 50.537 3 4.0174E-14 14711 20230619_1881_Aki_TMTPro18x_K_F2 142.85 136.12 6433.9 3445.3 6468.9 6112.1 5815.7 6024.8 5332.8 5695.2 7813.5 5898.4 6412.4 6616.1 7903.5 4387.2 6269.3 8024.8 7287.4 7421 5936.6 3181.2 6554.2 5949.6 6081.5 6088.8 5485.4 5847.5 7759.9 5974.6 6709.5 6612.9 7927 4800.7 6469.6 7965.2 6963.7 7054.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11335000 10205 2114 9652 19500 15639 15639 1 9606 Homo sapiens 0.055065387051854486 GHVELSEAR Unmodified 996.49886 0.49885759 4358 Q96H79;Q96H79-2 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes no 0 0 0 2.5 0.5 1 1 30.285 30.366 3 1.2783E-05 5846 20230619_1881_Aki_TMTPro18x_K_F2 145.72 97.44 87121 60625 82002 84328 102460 90595 107040 102140 109200 91344 106100 98490 100070 96955 104850 104840 123260 110050 80444 55730 84032 83302 104740 91434 107710 103270 110930 93137 108720 99678 102660 100430 107540 105530 117660 104520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105900000 10206 4358 9653 19501;19502 15640;15641 15641 2 9606 Homo sapiens 0.0004681126099512767 GHVFEESQVAGTPMFVVK Oxidation (M) 1976.9666 0.96659797 3447 P13639;Q8TA90;B4DPU3 EEF2 Elongation factor 2 yes no 0 1 0 7 0 1 52.607 52.677 3 5.2257E-10 14746 20230619_1887_Aki_TMTPro18x_K_F7 138.91 128.55 145580 84295 132440 150460 143080 62810 140200 145650 73632 178550 175820 145270 180800 133560 148900 179520 124890 171790 134270 77806 135760 145350 146780 72261 139650 144000 83314 177320 175600 148700 182600 140710 150850 179130 120050 163080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 706590000 10207 3447 9654 19503 15642 15642 2087 1 9606 Homo sapiens 0.017193331634871356 GHVFEESQVAGTPMFVVK Unmodified 1960.9717 0.97168334 3447 P13639;Q8TA90;B4DPU3 EEF2 Elongation factor 2 yes no 0 0 0 7.5 0.5 2 2 56.402 56.46 3;4 1.0522E-23 16323 20230619_1888_Aki_TMTPro18x_K_F8 203.37 186.49 713190 413440 676460 656570 493550 389400 651890 638380 428190 876580 787390 725920 907740 700260 785070 887550 660900 829430 657990 381000 687110 639760 529550 420010 641970 641520 465190 867310 795960 743020 915840 733540 794270 885370 634710 787790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1951499999.9999998 10208 3447 9654 19504;19505;19506;19507 15643;15644;15645 15645 3 9606 Homo sapiens 0.029636370260959666 GHVQPIR Unmodified 805.45587 0.45587056 643 A0A024RB14;P62854;Q5JNZ5;Q75MH1 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 0 0 0 7 0 1 23.038 23.138 2 0.018223 3698 20230619_1887_Aki_TMTPro18x_K_F7 107.55 57.246 122330 44382 128010 131570 160130 145410 145900 167320 174120 114190 101180 110780 159390 114240 94006 79358 189910 153640 112770 41485 130030 125750 163170 146370 148810 167910 172840 118230 109790 112640 157710 116130 101910 84513 180530 145270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68149000 10209 643 9655 19508 15646 15646 1 9606 Homo sapiens 0.04536085994232053 GHVTQDAPIPGSPLYTIK Unmodified 1892.9996 0.99961265 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 1 0 1 52.076 52.076 3 4.0065E-07 15228 20230619_1880_Aki_TMTPro18x_K_F1 117.18 103.77 31298 17472 31083 35022 29958 30865 34239 33850 31664 41788 40050 38317 38522 34982 33735 41897 34776 49843 28881 16158 31598 33843 31289 31574 34212 34595 32785 41675 40618 38943 39145 36572 34498 42407 33368 47201 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163080000 10210 2436 9656 19509 15647 15647 1 9606 Homo sapiens 0.08883283277896226 GHYAYDCHR Unmodified 1177.4723 0.47232526 981 A0A0B4J1Z1;B4DEK2;C9JAB2;Q16629-3;Q16629-2;Q16629-4;Q16629;Q8NB80;F8WEA1 SRSF7 Serine/arginine-rich splicing factor 7 yes no 0 0 0 4.33 0.471 2 1 23.258 23.325 3 4.63E-16 3778 20230619_1883_Aki_TMTPro18x_K_F4 183.65 174.92 51945 19371 35503 46674 57882 49467 55713 58628 74804 39263 47771 47835 46098 44175 42441 48841 63173 48851 47743 18022 37825 44873 58252 49996 56844 58737 73923 41039 50207 48084 46769 45905 44393 48994 60143 46451 3 3 3 3 3 3 3 3 3 3 3 3 2 3 3 3 3 3 79502000 10211 981 9657 19510;19511;19512 15648;15649 15648 2 9606 Homo sapiens -0.10931200902018645 GHYNNVSCAVFHPR Unmodified 1656.7579 0.7579426 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITV3;A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 2.5 0.5 1 1 36.135 36.192 4 1.3069E-11 8159 20230619_1881_Aki_TMTPro18x_K_F2 136.3 128.32 25096 16338 25829 25706 34248 33757 33136 31161 35428 28220 31025 32481 32401 23935 31430 23875 34708 29896 23182 15046 26302 25285 34840 33460 33535 31935 35771 28815 32115 32472 32957 24992 32112 24358 33143 28349 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69329000 10212 3647 9658 19513;19514 15650 15650 1 9606 Homo sapiens -0.044166058394012 GIAFAFNAK Unmodified 937.50215 0.50215205 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8;E5RIW1 XPO7 Exportin-7 yes no 0 0 0 3.5 0.5 1 1 57.474 57.492 3 0.0014271 17270 20230619_1883_Aki_TMTPro18x_K_F4 94.114 48.434 61649 52436 61685 64069 56012 63607 63164 60339 70922 60119 57016 50180 56533 48247 61204 58936 57995 51229 57020 48097 62587 63748 58838 64282 63519 61882 71239 60496 59106 51356 57939 50396 61962 58638 55473 48764 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44368000 10213 2083 9659 19515;19516 15651 15651 1 9606 Homo sapiens 0.030901061056511026 GIAGLYK Unmodified 720.41703 0.41702544 2922 E9PJH7;Q9H936;K4DIA8;E9PS95;A0A0D9SEI9;A0A0D9SFE1;A0A024RCA6 SLC25A22 Mitochondrial glutamate carrier 1 yes no 0 0 0 2 0 1 49.919 49.977 2 0.039214 14449 20230619_1881_Aki_TMTPro18x_K_F2 91.093 50.147 278620 251070 290840 304910 334130 391650 304080 322940 444910 276450 266980 235390 259130 230500 285580 283550 255430 277280 257890 230230 295170 304600 343250 387810 312640 333320 437740 281080 281790 240860 266100 240740 288270 283760 244830 263350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71559000 10214 2922 9660 19517 15652 15652 1 9606 Homo sapiens 0.04563360639849634 GIALWGGEK Unmodified 929.49707 0.49706667 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q86UM1;C9JQN7 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 3.33 3.3 2 1 55.837 55.857 2;3 0.00014451 16051 20230619_1888_Aki_TMTPro18x_K_F8 148.38 78.959 445350 375550 425970 424770 403230 486600 486880 467630 606390 388500 344400 291690 359680 285380 414960 382530 368200 319310 411740 344230 434060 425910 423410 486880 489550 476920 599930 394410 366180 300610 369180 299830 418210 379450 352400 304130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 299100000 10215 487 9661 19518;19519;19520 15653;15654;15655 15655 3 9606 Homo sapiens 0.029498022430516357 GIAPGDER Unmodified 813.39808 0.39808091 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 1.5 0.5 1 1 32.527 32.557 2 0.00090776 7003 20230619_1880_Aki_TMTPro18x_K_F1 123.45 75.105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10216 3758 9662 19521;19522 15656;15657 15656 2 9606 Homo sapiens -0.016082207218573785 GIAYIEFK Unmodified 939.50657 0.50656873 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 0 5.33 3.09 1 1 1 58.754 58.785 2;3 0.0022108 17310 20230619_1887_Aki_TMTPro18x_K_F7 130.34 74.622 428460 349480 396560 401850 374250 439600 463100 451690 483590 423360 396420 375060 443920 380300 464490 445210 427920 399600 395930 320420 405250 402190 393100 441930 462390 459840 487960 428030 412950 383300 452550 395530 469820 443920 409590 380130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7788999999.999999 10217 1658 9663 19523;19524;19525 15658;15659;15660 15659 3 9606 Homo sapiens 0.034395705285760414 GICECGVCK Unmodified 1081.4355 0.43547075 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 0 5.4 0.49 3 2 41.996 42.086 2;3 0.00028079 10422 20230619_1885_Aki_TMTPro18x_K_F5 114.6 100.4 162700 111620 160500 160350 206800 232820 197630 173310 245760 142680 163500 169450 162110 132400 186050 142100 187910 162450 150280 102650 163930 158790 211000 228480 201150 180400 244040 146920 171680 169530 166640 138350 188610 143940 179600 154170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 191080000 10218 1647 9664 19526;19527;19528;19529;19530 15661;15662;15663 15661 3 9606 Homo sapiens -0.10198956834415185 GICEYHEK Unmodified 1034.4491 0.4491302 2079 A8K5T7;Q9Y2Z0;B4DYC6;Q9Y2Z0-2;A8K7W3;Q9P1S2 SUGT1 Suppressor of G2 allele of SKP1 homolog yes no 0 0 0 3.5 0.5 1 1 36.156 36.206 3 0.0083577 8016 20230619_1883_Aki_TMTPro18x_K_F4 80.455 51.397 182130 140370 179510 195840 194640 223600 213990 204360 251910 226070 242150 235360 253230 211150 198230 228130 310150 279990 168330 128990 182920 193510 201600 223480 215780 210720 254030 227670 249280 237690 255580 219620 208860 231790 295460 265500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 200540000 10219 2079 9665 19531;19532 15664;15665 15665 2 9606 Homo sapiens -0.06671639739306556 GICIHTLTK Unmodified 1041.5641 0.56410038 4477 Q9BZK7;C9JLJ1;B7Z475;A0A0D9SF63 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes no 0 0 0 3 0 1 44.967 45.04 3 0.00024944 11825 20230619_1882_Aki_TMTPro18x_K_F3 120.99 56.691 261480 191570 231430 223750 248830 262190 256330 253900 278250 290370 296180 284060 321760 263840 253980 339080 321610 290370 241400 175740 237780 223910 257260 262100 258760 260890 283090 291300 304010 288110 324340 276780 263650 336570 306850 276430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232940000 10220 4477 9666 19533 15666 15666 1 9606 Homo sapiens 0.04498089462481403 GIDASDYQTVQIFYPSK Unmodified 1930.9313 0.93125832 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 7.5 0.5 1 1 62.016 62.048 3 1.0823E-13 18622 20230619_1888_Aki_TMTPro18x_K_F8 160.04 139.09 115310 102140 133620 109370 107850 119360 141110 123050 125530 137600 152230 139270 142990 121720 163660 138200 154000 156080 106820 93558 133690 110110 114830 120080 139910 125890 129840 138290 154520 140750 147180 127050 165380 139700 147450 148050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 607400000 10221 3598 9667 19534;19535 15667 15667 1 9606 Homo sapiens 0.0030299390737127396 GIDGVSVTSFSAR Unmodified 1294.6517 0.65172941 267 Q658J0;A0A024R3V5;A0A024R3V7;Q9GZT8-2;Q9GZT8;E7EXA3;Q6X734;Q9GZT8-3 DKFZp762L015;NIF3L1 NIF3-like protein 1 yes no 0 0 0 8 0 1 52.293 52.37 2 6.9316E-21 14580 20230619_1888_Aki_TMTPro18x_K_F8 228.13 185.01 224860 198250 212490 221440 207900 278550 242540 241010 262020 270250 258350 251630 287930 215910 234350 288810 279700 267910 207930 181670 216940 222520 217650 276400 243170 249550 265820 270990 266450 255140 290210 227880 242050 287720 267090 254730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104360000 10222 267 9668 19536 15668 15668 1 9606 Homo sapiens 0.01618961866938662 GIDIHGVPYVINVTLPDEK Unmodified 2078.1048 0.10480601 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 8 0 1 62.053 62.082 3 5.9834E-09 18651 20230619_1888_Aki_TMTPro18x_K_F8 129.43 106.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10223 1661 9669 19537 15669 15669 1 9606 Homo sapiens 0.10887779683662302 GIDLTQVK Unmodified 872.49673 0.49673232 239 P10515;A0A024R3D8;Q86YI5;A0A7P0TBE2;A0A7P0TAX2;A0A7P0TAG1;B4DJX1;A0A7P0TBK2;A0A7P0T997;A0A7P0Z4G4;H0YDD4;E9PEJ4;A0A7P0TA47;B4DS43;Q01991;B4DLQ2 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial;Acetyltransferase component of pyruvate dehydrogenase complex yes no 0 0 0 7.5 0.5 1 1 51.405 51.482 3 0.0028181 14238 20230619_1887_Aki_TMTPro18x_K_F7 100.15 32.168 178640 154430 168370 189970 223420 263880 237750 218540 296510 139360 140330 116620 133900 114040 166950 171890 171860 123230 165160 141650 172910 189830 228330 260100 240450 224290 292000 144760 150980 119610 138550 120720 169460 169070 164050 117730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138950000 10224 239 9670 19538;19539 15670;15671 15670 2 9606 Homo sapiens 0.05538382523195651 GIDPFSLDALSK Unmodified 1261.6554 0.65541781 765;2549 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2;B4DN39 CCT6A T-complex protein 1 subunit zeta no no 0 0 0 6 1.41 1 1 1 1 1 63.081 63.113 3 5.0839E-07 19122 20230619_1888_Aki_TMTPro18x_K_F8 151.13 40.195 1174000 954680 1026500 1162000 995210 1123000 1057400 1092200 1212800 1290400 1275200 1293300 1458300 1166800 1279900 1563000 1288200 1440000 1084400 875800 1055300 1156000 1038600 1138000 1067900 1123400 1230000 1293500 1313500 1308900 1473400 1228900 1306700 1556500 1233500 1368500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3514799999.9999995 10225 765;2549 9671 19540;19541;19542;19543;19544 15672;15673;15674 15674 3 9606 Homo sapiens 0.03505631640791762 GIDPFSLDSLAK Unmodified 1261.6554 0.65541781 4294 Q92526;Q92526-2;Q92526-3 CCT6B T-complex protein 1 subunit zeta-2 yes no 0 0 0 5 0 1 52.247 52.321 3 0.024749 14743 20230619_1885_Aki_TMTPro18x_K_F5 56.225 16.959 39543 34966 38460 40990 38518 46682 42209 41272 55350 45365 49122 46517 49499 42991 48408 53502 53582 50879 36575 32055 39180 40978 40160 46645 42748 42652 55361 45695 50693 47078 50471 45011 49557 53436 51198 48363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51441000 10226 4294 9672 19545 15675 15675 1 9606 Homo sapiens 0.035056316408144994 GIDQCIPLFVEAALER Unmodified 1829.9346 0.93456956 3354 O95373;B3KQG6 IPO7 Importin-7 yes no 0 0 0 6.5 0.5 1 1 65.344 65.38 3 3.4047E-12 20489 20230619_1886_Aki_TMTPro18x_K_F6 168.69 139.71 60506 47952 57548 54596 47523 58586 56617 60047 60262 65143 65946 65770 73144 59611 62787 85745 72296 75319 55915 43966 58540 54675 50453 58970 56714 61367 61444 65565 67704 66581 73920 63072 64683 85090 69101 71638 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 329300000 10227 3354 9673 19546;19547 15676;15677 15676 2 9606 Homo sapiens 0.052799654803948215 GIDRYNPENLATLER Unmodified 1759.8853 0.88531118 3173 K7ERF1;Q9UBQ5;K7ES31;Q9UBQ5-2;B4DVD7 EIF3K Eukaryotic translation initiation factor 3 subunit K yes no 0 0 1 5.5 0.5 1 1 49.788 49.865 3 4.2812E-14 13690 20230619_1885_Aki_TMTPro18x_K_F5 183.7 163.69 70049 71679 69285 60719 70312 61942 70390 72224 64040 80440 66321 60104 76618 56753 72801 84711 74869 67950 64868 65507 70384 62350 72802 62894 70815 73265 65822 80183 68369 61865 77632 60166 74274 83703 71566 64742 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116710000 10228 3173 9674 19548;19549 15678 15678 1 9606 Homo sapiens 0.03576393515777454 GIDYDFPSLILQK Unmodified 1507.7922 0.79224564 4471 Q9BYG3;C9J808;C9J6C5 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 0 0 0 8 0 1 63.971 63.994 3 7.9859E-08 19545 20230619_1888_Aki_TMTPro18x_K_F8 150.06 129.1 52442 44074 50308 56084 62760 63570 56498 62934 65888 60208 56538 64518 67529 53713 65021 79715 64851 82706 48484 40445 51493 55744 64007 63710 57635 64245 66251 61125 58997 64955 68434 57161 66242 79799 62174 78458 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141530000 10229 4471 9675 19550 15679 15679 1 9606 Homo sapiens 0.05866120800533281 GIDYETVPINLIK Unmodified 1473.8079 0.80789571 927 A0A0A0MR33;G3V267;G3V5T0;A0A0C4DFM0;G3V4T6 GSTZ1 yes no 0 0 0 8 0 1 62.586 62.611 3 0.013471 18920 20230619_1888_Aki_TMTPro18x_K_F8 63.727 47.503 44038 38812 38705 41570 44469 47338 43318 44794 50991 48562 45722 49712 51432 40799 49741 59897 57763 61091 40699 35552 39861 41846 45714 47394 43987 46032 51325 48912 47444 50121 52226 43406 51110 59912 55213 58000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81305000 10230 927 9676 19551 15680 15680 1 9606 Homo sapiens 0.0899440731757295 GIEAVGGK Unmodified 729.4021 0.40210366 3492 P22695;H3BRG4;H3BSJ9;H3BP04;H3BUE4;H3BUI9;A0A087WVZ4 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 5 0 1 42.251 42.334 2 0.036468 10510 20230619_1885_Aki_TMTPro18x_K_F5 83.753 40.838 47311 27412 57818 59545 77031 88226 72524 91153 86722 49365 72031 74880 65604 58872 71747 39587 85862 67938 43748 25381 58172 57817 78383 87007 73851 91724 86803 52940 74350 74298 67493 60247 73435 41795 81891 64294 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44852000 10231 3492 9677 19552 15681 15681 1 9606 Homo sapiens 0.026578687718597394 GIEDIIVSK Unmodified 972.54916 0.54916182 4045 Q8IXG0;Q69YP1;Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 crn;DKFZp762M013;CRNKL1 Crooked neck-like protein 1 yes no 0 0 0 5 0 1 57.585 57.644 3 0.0084157 16927 20230619_1885_Aki_TMTPro18x_K_F5 78.934 21.336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10232 4045 9678 19553 15682 15682 1 9606 Homo sapiens 0.06178920866148019 GIEDNPMVVPLCNR Oxidation (M) 1628.7651 0.76506139 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32;H0Y426 VARS Valine--tRNA ligase yes no 0 1 0 4 0 1 48.701 48.739 2 0.010868 13390 20230619_1883_Aki_TMTPro18x_K_F4 89.827 64.972 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10233 725 9679 19554 15683 15683 437 1 9606 Homo sapiens -0.02417054073816871 GIEDNPMVVPLCNR Unmodified 1612.7701 0.77014677 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32;H0Y426 VARS Valine--tRNA ligase yes no 0 0 0 5.33 0.471 2 1 54.744 54.814 2;3 8.7691E-12 15737 20230619_1885_Aki_TMTPro18x_K_F5 217.14 197.15 83259 69067 87658 87339 67498 88935 90480 85740 95980 140400 131440 135220 160590 122230 123650 167980 157890 174380 77028 63380 88396 86734 72414 89714 90120 89281 99094 138740 134460 137070 161140 129030 128530 168270 150850 165500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 303640000 10234 725 9679 19555;19556;19557 15684;15685 15684 2 9606 Homo sapiens -0.011727502111853028 GIEELFLDLCK Unmodified 1335.6744 0.67443869 658 Q9UL25;A0A024RBA9;Q96GX3 RAB21 Ras-related protein Rab-21 yes no 0 0 0 6 0.816 1 1 1 65.184 65.223 3 0.00029206 20432 20230619_1886_Aki_TMTPro18x_K_F6 103.34 74.599 61481 50476 59472 58510 48669 60404 63373 63645 63311 72835 68480 63749 75627 67117 68582 83080 67494 80668 56835 46281 60422 58482 51844 61006 63072 65033 64762 72825 70307 65283 76634 69964 69889 83052 64679 76596 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87749000 10235 658 9680 19558;19559;19560 15686;15687 15686 2 9606 Homo sapiens 0.020028449401934267 GIEESLRK Unmodified 930.51345 0.51344502 1026 Q16836-2;Q16836-3;Q16836;E9PF18;A0A0D9SFP2;B3KTT6;A0A140VK76;A0A0A0MSE2;A0A804HLB5;A0A804HKJ2;A0A1W2PQV5;A0A804HJW7;A0A1W2PRT2;A0A1W2PQC2;A0A804HJK7;A0A1W2PP40;A0A1W2PQ55 HADH Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes no 0 0 1 6.5 0.5 1 1 40.594 40.674 3 0.041599 9556 20230619_1887_Aki_TMTPro18x_K_F7 60.118 6.3435 102770 84738 91058 112770 127560 136120 119330 136420 156400 115980 163690 146130 138830 124250 132920 137650 176000 158750 94941 77804 94153 111850 129440 135860 121960 138740 157310 119290 166370 146370 142280 129580 137660 139280 167860 150620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 864100000 10236 1026 9681 19561;19562 15688 15688 1 9606 Homo sapiens 0.04540883409140406 GIEGHSPGNLPK Unmodified 1204.62 0.62003536 2270 B2R9B8;H0YAP0;Q96GY0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes no 0 0 0 6.5 0.5 1 1 39.37 39.446 3 3.0609E-06 8999 20230619_1887_Aki_TMTPro18x_K_F7 143 88.388 254340 198910 234190 233200 221970 248000 252300 244780 255140 266980 288990 364050 368970 320640 266620 428520 458350 424840 234960 182430 239390 232970 232370 249620 252810 250970 261250 271540 298850 363740 369450 337760 284360 428160 436460 403680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 378390000 10237 2270 9682 19563;19564 15689;15690 15690 2 9606 Homo sapiens 0.02591013903656858 GIEHDNPISR Unmodified 1136.5574 0.5574351 2953 F2Z2U4;H0Y4W2;Q9Y4A5-2;Q9Y4A5;Q59FH1;A0A994J4K1;A0A2R8YFJ4 TRRAP Transformation/transcription domain-associated protein yes no 0 0 0 3 0 1 34.169 34.235 3 0.00022149 7271 20230619_1882_Aki_TMTPro18x_K_F3 98.634 78.427 34710 29343 36107 34936 44254 41652 41588 36478 48562 35368 43951 39132 42194 36733 42770 38932 48244 38085 32113 26909 36669 34917 45196 41515 42289 37611 48846 35955 45208 39501 43159 38078 43757 39061 46036 36220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23048000 10238 2953 9683 19565 15691 15691 1 9606 Homo sapiens -0.005381321645472781 GIEHHPNFR Unmodified 1105.5417 0.54172545 1643 A0A7I2SU25;Q6QNY7;Q6QNY6;Q6QNY5;Q9Y223-5;Q9Y223-3;Q9Y223;Q9Y223-2;Q9Y223-4;B7Z5W2 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes no 0 0 0 6 0 1 28.81 28.841 3 0.0008698 5408 20230619_1886_Aki_TMTPro18x_K_F6 88.948 70.168 8435.1 5574.9 8854 8627.3 9934 8961.3 10772 9893.6 11764 9105.3 9370.1 9139.5 10272 12308 9540.2 9384.3 10236 12051 7793.6 5132.4 8972.8 8465.5 10237 9059.1 10840 10024 11827 9255.2 9766.2 9385.3 10446 12427 9751.8 9629.7 9799.7 11411 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3665700 10239 1643 9684 19566 15692 15692 1 9606 Homo sapiens -0.0068237389093610545 GIEILTDMSRPVELSDR Oxidation (M) 1945.9779 0.97789093 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8 CCT4 T-complex protein 1 subunit delta yes no 0 1 1 4.5 0.5 1 1 53.082 53.127 3 0.070972 15366 20230619_1883_Aki_TMTPro18x_K_F4 44.734 30.121 75068 69401 70161 76255 70092 91419 74646 93223 97737 86406 94981 86748 98322 81174 81972 99416 98170 104050 69432 63576 71730 76673 73097 91309 75772 94856 98116 87713 97646 87932 99461 84907 84635 99816 93813 98760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 530390000 10240 3622 9685 19567;19568 15693 15693 2308 1 9606 Homo sapiens 0.04274110466985803 GIEILTDMSRPVELSDR Unmodified 1929.983 0.98297631 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8 CCT4 T-complex protein 1 subunit delta yes no 0 0 1 5.5 0.5 1 1 60.363 60.418 3 0.03628 18337 20230619_1886_Aki_TMTPro18x_K_F6 47.639 26.976 19418 19524 23665 27026 14857 27674 26629 21792 20399 70883 84748 92674 98072 74353 45282 93768 98268 133360 18013 17923 23594 26669 16500 27778 26022 24004 23860 69575 84475 92441 97114 78427 50178 95952 93753 126120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 257220000 10241 3622 9685 19569;19570 15694 15694 1 9606 Homo sapiens 0.055184143296173715 GIEMSEVR Oxidation (M) 935.43823 0.43823117 425 B4DFL1;E9PEX6;B4DMK9;A0A024R713;P09622;P09622-2;P09622-3 DLD Dihydrolipoyl dehydrogenase;Dihydrolipoyl dehydrogenase, mitochondrial yes no 0 1 0 1.5 0.5 1 1 33.974 34.003 2 0.008152 7239 20230619_1881_Aki_TMTPro18x_K_F2 98.009 33.206 67354 45517 55372 73524 86345 76850 85612 88440 94880 65549 76067 71989 75815 63129 70924 71232 88045 76617 62121 41924 57811 71944 87098 77724 86606 88931 95290 67699 78898 72536 77172 65852 73145 71758 83996 72756 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78205000 10242 425 9686 19571;19572 15695 15695 266 1 9606 Homo sapiens -0.032070421135813376 GIEQAVQSHAVAEEEAR Unmodified 1822.881 0.88095408 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 0 0 1.5 0.5 1 1 43.229 43.269 3 5.5734E-49 11315 20230619_1881_Aki_TMTPro18x_K_F2 288.92 249.07 175270 133310 181610 195710 221250 252830 234160 221200 261430 199710 218700 234280 251710 212770 247220 221880 249310 277980 162040 122580 184680 193160 227070 250480 236100 227610 262930 204190 228020 235520 255640 220760 251440 226050 238720 263330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 360090000 10243 3954 9687 19573;19574 15696;15697 15697 2 9606 Homo sapiens 0.0024288430226988567 GIFEPFGR Unmodified 921.47085 0.47085192 1482 Q14498;Q14498-2;B4E1M7;A0A384NQ03;Q68DD9;B3KWX7;B4DLM0;Q6N037;B4DRA0;E1P5S2;Q6MZY7;B7Z4L7;Q14498-3;Q7Z3L0;H0Y4X3;G3XAC6;A0A0U1RQH7;A0A0U1RQW2 RBM39;DKFZp781C0423;DKFZp686A11192;RNPC2;DKFZp686C17209;DKFZp781I1140 RNA-binding protein 39 yes no 0 0 0 7.5 0.5 1 1 56.494 56.552 2 0.010365 16365 20230619_1888_Aki_TMTPro18x_K_F8 98.997 34.193 208200 181800 188100 212350 180480 210710 193270 213480 215500 216060 206930 211350 231200 188520 222290 252250 239870 244300 192450 166670 192780 211950 188570 213270 194930 217940 218040 218040 213850 214070 234740 198620 227330 251930 229370 232110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 408980000 10244 1482 9688 19575;19576 15698 15698 1 9606 Homo sapiens 0.006975330715704331 GIFGFTDSDCIGK Unmodified 1415.6391 0.63911582 401 P23381;A0A024R6K8;P23381-2;H0YJP3 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 0 0 6.33 0.471 2 1 61.811 61.861 2;3 0.0004231 18637 20230619_1887_Aki_TMTPro18x_K_F7 116.52 98.21 88812 76779 91613 91031 81012 100090 86492 97473 103620 98818 123250 114510 112550 99152 125150 139010 114230 124290 82172 70401 92670 90907 85235 100440 87508 99773 105310 100270 125030 115150 115800 104840 126530 138180 109470 118170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 241170000 10245 401 9689 19577;19578;19579 15699;15700 15700 2 9606 Homo sapiens -0.052078175876204114 GIFGSSAVPQPK Unmodified 1186.6346 0.63462279 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5QJR3;A0A8I5KV76;A0A8I5KSH0;A0A8I5KVZ4;A0A8I5KQU6;R4GMP9;A0A8I5KSI8 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 0 3 0 1 52.713 52.772 2 7.7392E-05 15379 20230619_1882_Aki_TMTPro18x_K_F3 149.72 125.57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10246 1785 9690 19580 15701 15701 1 9606 Homo sapiens 0.04877086051783408 GIFPVLCK Unmodified 932.51536 0.51535927 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 4 0.816 2 2 2 60.758 60.785 2;3 0.0017439 18179 20230619_1885_Aki_TMTPro18x_K_F5 149.92 98.234 456820 399680 386530 407740 413850 540930 457330 480020 580070 419440 357190 267500 322250 249570 462730 335530 317170 234830 422050 365970 399150 413040 429920 535410 462270 492710 574740 422890 375130 278120 336460 262690 459300 330630 304310 224410 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4655800000 10247 370;3451 9691 19581;19582;19583;19584;19585;19586 15702;15703;15704 15704 3 9606 Homo sapiens 0.04640220893395508 GIFSQADVHR Unmodified 1128.5676 0.56760585 1829 A0A8V8TMU9;A0A8V8TPL7;B4E1P2;Q04864-2;Q04864 REL Proto-oncogene c-Rel yes no 0 0 0 7 0 1 40.353 40.42 3 5.6929E-10 9438 20230619_1887_Aki_TMTPro18x_K_F7 201.84 174.1 40949 30860 32062 33258 38466 44530 39078 38152 51538 36528 40744 35682 42313 33169 37994 37016 42434 34960 37777 28287 33415 33548 39526 44031 39736 39367 51320 37019 42341 36199 42918 34513 38946 37030 40506 33254 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61271000 10248 1829 9692 19587 15705 15705 1 9606 Homo sapiens 0.008464755607064944 GIFTSEIGTK Unmodified 1051.555 0.55497548 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7.5 0.5 2 2 54.233 54.301 2;3 2.9474E-19 15399 20230619_1888_Aki_TMTPro18x_K_F8 254.82 200.05 470260 395450 438640 462140 425490 483550 492080 474400 514810 558790 590430 576380 590800 498230 551840 628430 604740 628540 434670 362590 448190 461620 444920 487200 493120 487620 526380 560630 602180 581820 601080 523420 565200 629210 578260 596910 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 935840000 10249 3758 9693 19588;19589;19590;19591 15706;15707;15708 15708 3 9606 Homo sapiens 0.03126019377805278 GIFVFGNPQLSVIALGSR Unmodified 1874.0414 0.04141789 1835 A0A8V8TN35;O95470 SGPL1 Sphingosine-1-phosphate lyase 1 yes no 0 0 0 7.5 0.5 1 1 64.954 64.977 3 2.2433E-09 19945 20230619_1888_Aki_TMTPro18x_K_F8 123.36 89.496 8013.4 6045.1 8596.7 7476.2 9504.8 8600.8 8400.2 10053 11169 9817.2 10462 12588 7306.4 6446.3 8754.5 11567 9445.2 10036 7410.7 5548.2 8687.7 7453.1 9759.4 8649.8 8625.9 10157 11189 10012 10644 12440 7629.5 7115.3 8931.7 11447 9034.5 9546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32467000 10250 1835 9694 19592;19593 15709 15709 1 9606 Homo sapiens 0.1393588375708532 GIGEFFR Unmodified 824.41809 0.41808807 3053 H0YKX3;Q15004;H0YMA4;A0A0U1RQM0 KIAA0101 PCNA-associated factor yes no 0 0 0 1 0 1 54.92 54.92 2 0.081067 16386 20230619_1880_Aki_TMTPro18x_K_F1 69.176 37.872 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10251 3053 9695 19594 15710 15710 1 9606 Homo sapiens -0.0011442499123859307 GIGFLTSGWR Unmodified 1092.5716 0.5716286 4209 Q8IXM3 MRPL41 39S ribosomal protein L41, mitochondrial yes yes 0 0 0 6 0 1 61.211 61.266 2 0.00044705 18656 20230619_1886_Aki_TMTPro18x_K_F6 153.73 129.76 198590 183290 185250 210330 190500 258450 239080 245110 284040 184960 166540 140810 152490 143910 195680 172530 173240 143090 183680 167970 189620 210830 199220 257260 239530 249650 281820 189020 175720 145200 158280 149790 196840 171370 165770 136330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83523000 10252 4209 9696 19595 15711 15711 1 9606 Homo sapiens 0.029045650544276214 GIGGHDNISAR Unmodified 1095.5421 0.54211939 2677 B7Z201;K7ENL9;B7Z3Q1;Q96DM3 C18orf8 Uncharacterized protein C18orf8 yes no 0 0 0 4.5 0.5 1 1 30.744 30.815 3 0.00012673 5990 20230619_1885_Aki_TMTPro18x_K_F5 115 84.687 16635 12686 17523 16613 25266 21456 22703 20989 26543 19530 21206 21301 16890 15659 22964 17708 25419 22475 15382 11650 17832 16521 25511 21333 23146 21435 26590 19880 21833 21347 17680 16448 23349 18045 24276 21307 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19387000 10253 2677 9697 19596;19597 15712 15712 1 9606 Homo sapiens -0.0018299896171356522 GIGLAIVR Unmodified 797.51232 0.51232281 1468 A0A384NL53;P16152;E9PQ63;A8MTM1;P16152-2 CBR1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 3.5 0.5 1 1 50.433 50.486 2 0.028858 14206 20230619_1883_Aki_TMTPro18x_K_F4 81.1 30.561 507930 494150 477010 451020 680010 972620 604490 661560 978990 192400 199360 194020 219610 189770 238680 256250 254910 233630 469990 451920 490340 466000 690860 936260 624770 684210 942550 221540 242070 197370 224890 199360 243350 255120 243590 222220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 582010000 10254 1468 9698 19598;19599 15713 15713 1 9606 Homo sapiens 0.10546713830899535 GIGMGNIGPAGMGMEGIGFGINK Oxidation (M) 2193.0381 0.038065125 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q7KYM9;M0QYL3 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 1 0 2.5 0.5 1 1 62.647 62.667 3 2.0461E-34 19739 20230619_1881_Aki_TMTPro18x_K_F2 203.26 186.58 107900 89242 100320 115490 96725 119430 120140 122520 117620 118960 125790 122840 136410 121870 123260 138460 138660 143330 99724 81914 102600 114510 101460 120490 119720 124860 120310 120520 129140 124560 138310 126610 126510 139100 132550 136070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 330440000 10255 3194;3631 9699 19600;19601 15714;15715 15714 1856;1857;1858 2 9606 Homo sapiens -0.010732384657785587 GIGMGNIGPAGMGMEGIGFGINK 2 Oxidation (M) 2209.033 0.032979747 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q7KYM9;M0QYL3 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 2 0 2 0 1 61.725 61.735 3 0.067493 19362 20230619_1881_Aki_TMTPro18x_K_F2 47.499 38.335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10256 3194;3631 9699 19602 15716 15716 1856;1857;1858 1 9606 Homo sapiens -0.02317542328410127 GIGMGNIGPAGMGMEGIGFGINK Unmodified 2177.0432 0.043150503 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q7KYM9;M0QYL3 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 3 0 1 63.654 63.685 3 0.011011 20019 20230619_1882_Aki_TMTPro18x_K_F3 48.783 33.191 19852 16143 18474 18525 12834 19419 18917 15331 22535 20632 18804 20025 20439 15360 18576 21680 20615 22542 18345 14800 18803 18527 13989 19468 18828 16102 22601 20557 19549 20191 20710 16345 19053 21722 19718 21394 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233560000 10257 3194;3631 9699 19603 15717 15717 1 9606 Homo sapiens 0.0017106539680753485 GIGPVYSSK Unmodified 906.48108 0.48108226 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 0 0 2 0 1 45.289 45.371 2 0.0034014 12292 20230619_1881_Aki_TMTPro18x_K_F2 97.431 60.337 138440 116010 127810 134280 145700 169110 157970 149600 194230 133830 134150 116200 128230 116290 138070 157410 160960 124610 127950 106360 131050 134580 150390 167900 159610 153750 193240 135720 140120 118930 131650 122060 141590 155640 153530 118830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86097000 10258 351 9700 19604 15718 15718 1 9606 Homo sapiens 0.02410096006144613 GIGQEHFFK Unmodified 1061.5294 0.52942943 1694 Q9UG73;A0A7P0T893;Q8NE02;O43823 DKFZp586B1222;AKAP8 A-kinase anchor protein 8 yes no 0 0 0 7.5 0.5 1 1 46.241 46.304 3 0.00096104 11992 20230619_1888_Aki_TMTPro18x_K_F8 86.898 58.155 72038 59726 67722 78615 74608 78810 75984 76419 93221 89161 80659 83528 94412 82183 75644 103720 86060 92010 66584 54831 69316 77823 76994 79630 77066 78584 93538 89279 83953 85021 95056 85938 77984 103150 82282 87494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151500000 10259 1694 9701 19605;19606 15719 15719 1 9606 Homo sapiens 0.0011258964602802735 GIGQVLPTHLMEER Unmodified 1578.8188 0.81881152 790 Q05397-7;E7ESA6;Q658W2;A0A059VC25;H0YBP1;A0A8Q3WLM4;Q05397;Q05397-5;Q59GN8;Q59GM6;Q05397-2;I6L996;E9PEI4;B4DH13;H0YBZ1;Q8N9D7;H0YB16;A0A024R9H6;Q05397-6;B4DWJ1;E5RG80;E5RJQ2 PTK2;DKFZp666O0110;FAK Focal adhesion kinase 1 yes no 0 0 0 7 0 1 52.293 52.367 3 7.9998E-06 14652 20230619_1887_Aki_TMTPro18x_K_F7 118.33 104.18 124390 96450 120840 126650 115560 132190 129440 129910 162850 148400 139900 139480 165870 130610 138130 175060 153850 151180 114960 88566 123000 125490 120910 133180 130750 133370 163120 148760 145730 141760 167100 137400 142020 173760 147040 143860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100840000 10260 790 9702 19607 15720;15721 15721 2 9606 Homo sapiens 0.052554864201965756 GIGTAYEGHVR Unmodified 1158.5782 0.57817054 938 Q8IWQ7;B9EGA7;A0A0A0MRJ0;A0A0A0MRJ1;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-2;Q5VT25-6;Q5HYB0;H0Y5V1;A0A8I5QJM2;H0Y7V8 CDC42BPA;DKFZp686P1738 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha yes no 0 0 0 5.5 0.5 1 1 34.842 34.912 3 2.7856E-23 7594 20230619_1886_Aki_TMTPro18x_K_F6 209.21 149.78 52016 36112 43419 52537 60238 63625 56910 55163 85080 62595 78432 72650 72255 70582 66625 71886 80289 72348 47987 33214 45128 51815 61202 63292 58414 57145 84718 63244 80456 73259 73750 72895 68627 72243 76633 68741 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49043000 10261 938 9703 19608;19609 15722;15723 15723 2 9606 Homo sapiens 0.005224582151413415 GIGTLHLKPTANQK Unmodified 1476.8413 0.84126152 312 A0A024R4X7;Q9UKX7-2;Q9UKX7;B4E2D3;B0QY21 hCG_1989366;NUP50 Nuclear pore complex protein Nup50 yes no 0 0 1 4.5 0.5 1 1 43.628 43.691 4 0.00012928 11058 20230619_1885_Aki_TMTPro18x_K_F5 98.368 81.736 128640 105770 109670 106570 109340 144500 126330 121420 142080 93573 92368 84952 93835 82086 92828 112360 88633 69524 118810 96862 113000 108110 114300 142690 126840 124880 141730 95918 97146 86645 95710 86292 94286 109990 84711 66558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 269080000 10262 312 9704 19610;19611 15724 15724 1 9606 Homo sapiens 0.12191453880154768 GIHDADSEAR Unmodified 1069.4789 0.47885043 1818 Q7Z460;Q7Z460-3;Q7Z460-5;Q7Z460-4;Q7Z460-2;A0A8V8TLP7;F8WA11;A0A8V8TQK9;A0A8V8TRF6;H0Y5T1;B7Z4E5;B7Z7Q8;B7Z5R7 CLASP1 CLIP-associating protein 1 yes no 0 0 0 1 0 1 26.663 26.663 3 1.2273E-05 4725 20230619_1880_Aki_TMTPro18x_K_F1 148.32 129.01 6513.5 3071.1 8359.5 7255 11789 10500 9021.4 11364 13099 7791.3 9662.1 13611 8786.1 8168.2 8999.6 5550.1 13140 13596 6021 2851.3 8379.6 7021.8 11882 10387 9386 11445 12960 8245.5 10063 13347 9016.4 8471.9 9355.9 6080.4 12536 12827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9523800 10263 1818 9705 19612 15725 15725 1 9606 Homo sapiens -0.05310984469633695 GIHEYDFEIK Unmodified 1249.5979 0.59790293 526 A0A024R8M0;Q14344;Q14344-2;B4DWV9 GNA13 Guanine nucleotide-binding protein subunit alpha-13 yes no 0 0 0 3.5 0.5 1 1 50.485 50.538 3 7.8272E-06 14205 20230619_1883_Aki_TMTPro18x_K_F4 156.48 68.567 151940 105690 145980 167490 147660 140270 163640 169630 172680 185810 191020 206320 223430 187110 178860 230980 217110 230920 140320 97307 148920 163650 153490 144570 164410 171740 176250 187470 196630 207890 224900 195970 185070 231250 207460 219280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230490000 10264 526 9706 19613;19614 15726 15726 1 9606 Homo sapiens -0.01691210564786161 GIHPTIISESFQK Unmodified 1455.7722 0.7721789 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 4.5 3.5 1 1 50.111 50.149 3 1.3834E-21 14417 20230619_1880_Aki_TMTPro18x_K_F1 232.48 207.71 203910 172130 215580 248520 203600 243680 218620 218200 183030 215380 197510 231890 213870 151990 174050 225480 215870 277270 188680 158180 218050 244500 212830 246080 218600 224700 189310 218160 202920 231830 215690 163530 180300 228100 206570 262580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 134270000 10265 3622 9707 19615;19616 15727;15728 15727 2 9606 Homo sapiens 0.06252369860544604 GIHVEVPPAEAER Unmodified 1402.7205 0.72047768 3563 P38117-2;P38117 ETFB Electron transfer flavoprotein subunit beta yes no 0 0 0 3 0 1 40.663 40.722 3 5.7389E-08 9901 20230619_1882_Aki_TMTPro18x_K_F3 117.07 95.515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10266 3563 9708 19617 15729 15729 1 9606 Homo sapiens 0.035226261666366554 GIHYWEVELQK Unmodified 1400.7089 0.70885036 3885 Q59GW5;Q14258;D3DTY9 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes no 0 0 0 7 0 1 55.165 55.226 3 3.8279E-07 15869 20230619_1887_Aki_TMTPro18x_K_F7 166.97 137.43 100220 77867 97276 107130 112740 140670 129310 121370 145610 115740 112270 116690 125130 107290 110880 141860 126090 144840 92615 71537 99394 106170 116460 139180 129860 125180 146030 117380 117360 118150 126660 112820 114020 142060 120620 137470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234330000 10267 3885 9709 19618 15730 15730 1 9606 Homo sapiens 0.02452429143295376 GIIASSVGTILK Unmodified 1157.702 0.70197407 3468 P17812;A0A3B3IRI2;A0A8Q3WKZ7;B4DMB5;A0A8Q3WL40;A0A3B3IRQ8;A0A3B3ITF6;A0A3B3ITB8;B7Z9C4;A0A3B3ITH9;A0A8Q3WL00;A0A8Q3WL12 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 4 0 1 61.515 61.518 3 0.016345 18945 20230619_1883_Aki_TMTPro18x_K_F4 60 43.776 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10268 3468 9710 19619 15731 15731 1 9606 Homo sapiens 0.12943116262749754 GIIDLIEER Unmodified 1056.5815 0.58152458 2868 E5KND7 GFM1 Elongation factor G, mitochondrial yes yes 0 0 0 3.5 0.5 1 1 61.897 61.914 2 0.037298 19194 20230619_1882_Aki_TMTPro18x_K_F3 69.338 40.94 99163 80110 94177 105240 91590 105940 112340 110830 124880 126910 119090 118500 145430 114300 121200 150930 129470 139200 91648 73550 96127 104220 95946 107160 112450 113320 126340 127140 123600 120590 146380 120020 124290 150330 123870 132310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86830000 10269 2868 9711 19620;19621 15732 15732 1 9606 Homo sapiens 0.0554970826913177 GIIDPTK Unmodified 742.4225 0.42250475 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 6.2 1.17 2 1 1 1 45.995 46.068 2;3 0.0069009 12111 20230619_1886_Aki_TMTPro18x_K_F6 129.4 31.264 2508500 2066800 2166400 2449800 3025100 2979700 2868200 2904900 3706900 3031000 3269900 3184900 3443000 2855900 2898700 3560100 3484200 3192600 2317000 1895400 2243500 2449600 3069400 2972300 2925900 2975600 3710000 3062700 3381800 3216600 3482800 2993600 2993000 3544000 3325900 3037300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6951999999.999999 10270 272 9712 19622;19623;19624;19625;19626 15733;15734;15735;15736 15734 4 9606 Homo sapiens 0.040990394316736456 GIIDSTVSDQR Unmodified 1189.5939 0.59388018 664 P20020-1;P20020;P20020-4;P20020-6;P20020-2;P20020-5;A0A024RBC7;E7ERY9;Q59H63 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase yes no 0 0 0 3 0 1 42.967 43.033 2 7.4416E-17 10919 20230619_1882_Aki_TMTPro18x_K_F3 183.72 130.25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10271 664 9713 19627 15737 15737 1 9606 Homo sapiens 0.006666999415074315 GIIGYDV Unmodified 735.38031 0.38030558 1768 A0A8I5KSW3;O75964 ATP5L ATP synthase subunit g, mitochondrial yes no 0 0 0 4 0.816 1 1 1 59.724 59.752 2 0.053574 18308 20230619_1882_Aki_TMTPro18x_K_F3 84.609 77.196 27165 29767 34031 33033 30009 33734 38054 32322 34297 38335 34837 28832 38262 24756 47073 30541 25119 31402 25225 27257 33938 33116 31670 34038 37785 33294 35204 38122 35859 29565 39276 26027 46411 30700 24289 29794 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132830000 10272 1768 9714 19628;19629;19630 15738 15738 1 9606 Homo sapiens 0.002030640232874248 GIIPLENLSIR Unmodified 1223.7238 0.72377215 1023 Q96HS5;B4DLA7;Q15795;B7Z2V9;K7ENQ8;B2R9C3;A0A0D9SFG6;A0A994J5E5;Q15438-3;Q15438-2;Q15438;Q99418-2;O43739-2;Q99418;O43739 CYTH3;CYTH1;CYTH2 Cytohesin-1;Cytohesin-2;Cytohesin-3 yes no 0 0 0 1.5 0.5 1 1 61.609 61.614 2 0.0012239 19322 20230619_1881_Aki_TMTPro18x_K_F2 98.73 54.119 159060 135010 158280 166220 148660 161020 178620 150970 149540 156560 162880 132560 141060 111590 179150 169020 152960 147680 147100 123850 160760 165240 155840 163020 177470 155190 154540 157170 165440 135120 146380 118870 180010 167760 146570 140510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46135000 10273 1023 9715 19631;19632 15739 15739 1 9606 Homo sapiens 0.12085921011316714 GIISAADR Unmodified 801.43447 0.43446642 2076 A8K5J1;P11172;B5LY71;P11172-3;B5LY64;B5LY69;P11172-2;B5LY70;P11172-4 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase;Orotidine 5'-phosphate decarboxylase yes no 0 0 0 4.5 0.5 1 1 38.868 38.935 2 0.0019712 9077 20230619_1885_Aki_TMTPro18x_K_F5 134.15 55.005 176530 122940 150520 163280 175470 207030 175340 178970 253550 197750 213670 219480 214570 198320 183520 222370 251380 212800 162880 112960 155530 162100 180610 205320 179180 185250 252120 199680 221120 221110 217690 206430 191100 222460 239600 202360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 163930000 10274 2076 9716 19633;19634 15740;15741 15741 2 9606 Homo sapiens 0.025806561748481727 GIISAADRLEAAEMYR Oxidation (M) 1780.8778 0.87778296 2076 A8K5J1;P11172;B5LY71;P11172-3;B5LY64;B5LY69;P11172-2;B5LY70;P11172-4 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase;Orotidine 5'-phosphate decarboxylase yes no 0 1 1 5.5 0.5 1 1 53.073 53.147 3 5.9305E-05 15125 20230619_1885_Aki_TMTPro18x_K_F5 96.208 81.95 139120 118460 139580 144200 149860 143770 148810 145040 165430 176120 179920 175720 190220 160840 178070 203660 200880 187820 128680 108650 141900 143530 154650 145530 150660 148940 168270 176300 184350 177960 193240 168650 182680 203020 191890 178600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 338500000 10275 2076 9717 19635;19636 15742;15743 15742 1298 2 9606 Homo sapiens 0.018579179238940924 GIIWGEDTLMEYLENPK Unmodified 2006.9659 0.96592926 2752 C9JFR7;G4XXL9;P99999 CYCS Cytochrome c yes no 0 0 0 5 0 1 66.087 66.13 3 0.016632 20609 20230619_1885_Aki_TMTPro18x_K_F5 58.079 46.808 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10276 2752 9718 19637 15744 15744 1 9606 Homo sapiens 0.002724937238781422 GIKGEEIVQQLIENSTTFR Unmodified 2161.1379 0.13789705 4668 Q9UJA5;Q9UJA5-2;Q9UJA5-3 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes no 0 0 1 2 0 1 63.725 63.734 3 5.5031E-07 20307 20230619_1881_Aki_TMTPro18x_K_F2 100.28 84.163 20713 17875 21252 22786 18434 20837 23168 19857 18410 24587 22255 15994 19037 11670 24228 10580 14128 12102 19163 16402 21512 22581 19483 21197 22943 20492 19204 24316 22486 16468 19729 12156 23911 10782 13601 11486 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15711000 10277 4668 9719 19638 15745 15745 1 9606 Homo sapiens 0.10377361735709201 GIKPVTLELGGK Unmodified 1210.7285 0.72852317 2459 B4DE91;P49189;B4DX14;P49189-3;P49189-2;B4DYY1 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 1 2.5 0.5 1 1 52.82 52.866 3 3.902E-05 15700 20230619_1881_Aki_TMTPro18x_K_F2 120.53 89.154 116020 102530 118260 132480 136300 162000 152920 151510 165340 133580 155160 138540 129810 106760 161910 128540 127840 120430 107350 94091 120340 131690 140670 161270 153580 155020 167180 136150 158520 139400 134750 112320 162010 128490 122590 114500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193400000 10278 2459 9720 19639;19640 15746 15746 1 9606 Homo sapiens 0.13158805154057518 GILAADESTGSIAK Unmodified 1331.6933 0.69325988 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;H3BUH7 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 5.17 1.07 2 2 1 1 51.359 51.419 2;3 7.9123E-12 14342 20230619_1885_Aki_TMTPro18x_K_F5 143.42 115.1 1316600 1024800 1063700 1281200 1302200 1300800 1437900 1461800 1464800 1576900 1743200 1674500 1820600 1437100 1686400 1929900 1681200 1810500 1215100 940530 1106400 1273100 1336600 1318000 1442800 1485200 1502400 1589800 1778500 1688500 1848200 1516600 1718300 1924000 1609500 1720400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 10278000000 10279 3378 9721 19641;19642;19643;19644;19645;19646 15747;15748 15748 2 9606 Homo sapiens 0.040680978356022024 GILADEDSSRPVWLK Unmodified 1684.8784 0.87843489 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 1 7.5 0.5 1 1 56.464 56.522 3;4 1.1027E-07 16380 20230619_1887_Aki_TMTPro18x_K_F7 138.73 113.81 86660 69858 82215 69764 50086 55386 65567 70461 67117 97677 90522 87461 97528 79624 80079 100960 83022 84959 80091 63974 83311 70378 54988 57501 65365 71660 69357 96866 92047 88985 98443 83522 82018 100170 79420 80857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 575050000 10280 3606 9722 19647;19648 15749;15750 15749 2 9606 Homo sapiens 0.06339080635211758 GILEQGWQADSTTR Unmodified 1560.7532 0.75323437 290 E9PGT6;B2R8N1;A0A024R4D1;Q99627-2;Q99627;H7C3S9 COPS8 COP9 signalosome complex subunit 8 yes no 0 0 0 4.5 0.5 1 1 51.617 51.692 2;3 2.6059E-13 14762 20230619_1883_Aki_TMTPro18x_K_F4 139.3 133.58 49896 44166 46679 57927 51939 60300 65497 55955 62984 60637 63550 60350 71152 57475 60317 73273 64597 77395 46136 40535 47850 57376 53902 60683 65142 57627 64329 61035 65490 61223 71840 60245 61838 73565 61853 73419 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54909000 10281 290 9723 19649;19650 15751;15752 15751 2 9606 Homo sapiens -0.004712115011670903 GILFVGSGVSGGEEGAR Unmodified 1590.8002 0.80018457 3630 P52209-2;P52209;B4E2U0;B4DL86;K7EM49;K7EMN2;K7EPF6 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 5 0.816 1 1 1 55.149 55.2 2 8.2189E-86 16084 20230619_1886_Aki_TMTPro18x_K_F6 363.85 291.36 210510 179170 180180 191490 204150 243460 212690 215190 239080 245060 237810 233430 268110 227470 241000 285240 244980 276470 194470 164140 186010 193110 210630 241610 214790 222530 242150 245750 245360 237400 271370 237910 246020 285090 234570 262570 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 557390000 10282 3630 9724 19651;19652;19653 15753;15754;15755 15755 3 9606 Homo sapiens 0.028416480500482066 GILGNAIK Unmodified 784.48069 0.48068833 3155 K7ERP4;K7EJ20;P36969-2;P36969;A0A0A0MTT1;Q6PI42;Q6PJX4 GPX4 Glutathione peroxidase;Phospholipid hydroperoxide glutathione peroxidase, mitochondrial yes no 0 0 0 2 0 1 50.941 50.986 2 0.0031 14882 20230619_1881_Aki_TMTPro18x_K_F2 107.43 27.052 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10283 3155 9725 19654 15756 15756 1 9606 Homo sapiens 0.07982721076950838 GILGYTEH Unmodified 888.43413 0.43413207 4086 Q5ZEY3 GAPD yes yes 0 0 0 4 0 1 47.368 47.41 2 4.212E-14 12794 20230619_1883_Aki_TMTPro18x_K_F4 194.28 162.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10284 4086 9726 19655 15757 15757 1 9606 Homo sapiens -0.014547635449957852 GILHQDK Unmodified 809.43955 0.43955179 249 A0A024R3K2;Q96CM3-2;Q96CM3;E9PJV3 RPUSD4 RNA pseudouridylate synthase domain-containing protein 4 yes no 0 0 0 7 0 1 35.925 35.996 3 0.02044 7724 20230619_1887_Aki_TMTPro18x_K_F7 70.69 38.756 28566 17821 30164 32163 36378 33066 33924 34239 34184 25392 34077 42299 39023 25250 34388 52015 53647 67701 26387 16446 30605 31294 37160 33389 34363 34677 34779 26643 35243 41635 39425 28074 36214 52636 51240 64085 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11177000 10285 249 9727 19656 15758 15758 1 9606 Homo sapiens 0.02720960037470377 GILIPLCESGTCTLR Unmodified 1688.859 0.85896177 3871 Q13895 BYSL Bystin yes yes 0 0 0 1.67 0.471 1 2 60.302 60.308 2 3.8613E-07 18611 20230619_1880_Aki_TMTPro18x_K_F1 165.63 153.78 47716 38276 42588 42691 41138 42913 46384 43615 45839 52219 43011 42381 50756 42857 39530 63965 53039 52891 44077 35086 43664 42776 42967 43416 46453 44744 46679 52005 44593 43517 51040 45305 41276 63242 50615 50354 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39006000 10286 3871 9728 19657;19658;19659 15759;15760;15761 15759 3 9606 Homo sapiens 0.042086650284772986 GILLYGPPGCGK Unmodified 1230.6431 0.64307898 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;A0A994J5C5;A0A994J855;A0A994J5Y2;A0A994J7T3 NSF Vesicle-fusing ATPase yes no 0 0 0 3.5 0.5 1 1 56.566 56.587 2 4.9316E-05 17045 20230619_1882_Aki_TMTPro18x_K_F3 157.86 101.3 27370 24550 30655 31956 23296 27609 32372 31821 32577 36150 33044 35305 33322 33490 32893 37601 33954 38276 25349 22529 30769 31612 25021 28340 32132 32342 33214 36265 33917 35807 34015 34803 33542 37746 32507 36331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65299000 10287 1435 9729 19660;19661 15762 15762 1 9606 Homo sapiens 0.03698316696772963 GILNGQK Unmodified 728.41809 0.41808807 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 0 7.5 0.5 1 1 38.556 38.582 2 0.022723 8882 20230619_1888_Aki_TMTPro18x_K_F8 101.52 28.699 289900 111880 301080 299820 308380 332140 273260 329370 247080 231310 347330 315460 239530 227860 314100 129990 413480 316390 267270 104280 304940 287440 318610 332950 277180 333970 256930 241430 346850 313350 251650 232900 322480 143240 393980 298890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 245670000 10288 4666 9730 19662;19663 15763;15764 15764 2 9606 Homo sapiens 0.04301575008753389 GILQELFLNK Unmodified 1173.6758 0.67575932 3960 Q96QC0;Q2L6I0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes no 0 0 0 3 0 1 64.452 64.484 3 0.0069843 20316 20230619_1882_Aki_TMTPro18x_K_F3 79.974 59.692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10289 3960 9731 19664 15765 15765 1 9606 Homo sapiens 0.09586847091281925 GILRPLSTR Unmodified 1011.6189 0.61891314 4730 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7 NOC2L Nucleolar complex protein 2 homolog yes no 0 0 1 7.5 0.5 1 1 40.35 40.38 3 0.00012155 9638 20230619_1888_Aki_TMTPro18x_K_F8 140.11 87.63 512670 448870 438720 595630 593710 736510 620290 601190 772510 227270 253560 238580 237180 218450 325620 301130 219740 209080 473690 412040 455270 590830 606180 730520 627930 613730 755830 251240 283990 241600 247070 230110 323590 296260 211200 199600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 247080000 10290 4730 9732 19665;19666 15766;15767 15767 2 9606 Homo sapiens 0.1135684432541666 GIMEEDEACGR Oxidation (M) 1281.4966 0.49655068 173 A0A0S2Z487;A0A024R1X8;P14923;C9JTX4;C9J826;C9JK18;C9JKY1;C9JPI2;K7ERP3 JUP Junction plakoglobin no no 0 1 0 1 0 1 34.334 34.334 2 7.6278E-06 7711 20230619_1880_Aki_TMTPro18x_K_F1 147.4 138.87 30335 28337 36700 33843 48913 43302 44470 40759 48398 40807 41662 42008 49687 30764 35542 42915 49554 41620 28123 25978 36909 33862 49616 43042 45203 41818 48819 41283 43402 42214 49721 32799 37199 42835 47222 39573 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55603000 10291 173 9733 19667 15768 15768 112 1 9606 Homo sapiens -0.13293773321311164 GINESYKK Unmodified 937.4869 0.48689592 1335 A0A2C9F2P4;A0A286YFF7;P50897;B4DWU3;Q5T0S4;A0A286YFE3;A0A286YFL8;P50897-2;E9PIA8 PPT1 Palmitoyl-protein thioesterase 1 yes no 0 0 1 8 0 1 39.103 39.09 3 0.062522 9139 20230619_1888_Aki_TMTPro18x_K_F8 51.059 42.519 35589 21347 36313 45790 68998 75904 53151 70194 65226 34943 49221 60266 49964 43672 58682 28889 58629 57308 32859 19757 37381 44561 68670 74268 54890 71093 65034 38006 51387 59423 51397 44834 59343 30960 56087 54135 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31683000 10292 1335 9734 19668 15769 15769 1 9606 Homo sapiens 0.01565194517809232 GINSSNVENQLQATQAAR Unmodified 1899.9399 0.93986594 1653 A0A7I2V351;A0A7I2V487;Q7Z726;A8K7D9;A0A7I2YQE1;P52292;A0A7I2V3Z3;J3QLL0;J3KS65 KPNA2 Importin subunit alpha;Importin subunit alpha-1 yes no 0 0 0 6.5 0.5 1 1 46.148 46.233 3 1.6391E-48 12215 20230619_1886_Aki_TMTPro18x_K_F6 276.67 255.73 245130 179600 220670 235110 222220 249770 239820 221650 279900 261060 243600 236440 299310 199070 227430 303520 256910 242810 226330 164950 226300 233020 231310 250790 242000 229510 281520 261040 253970 240000 299950 212280 234570 299700 245430 231320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1187300000 10293 1653 9735 19669;19670 15770;15771;15772 15770 3 9606 Homo sapiens 0.02589360596584811 GINTLER Unmodified 801.43447 0.43446642 1656 A0A7I2V3A9;B2RAM6;P52732;Q59GZ5 KIF11 Kinesin-like protein;Kinesin-like protein KIF11 yes no 0 0 0 4.5 0.5 1 1 37.856 37.924 2 0.043952 8698 20230619_1883_Aki_TMTPro18x_K_F4 88.954 23.641 69697 54473 66399 72142 66880 84127 68796 70684 104840 81344 78363 62632 87926 64748 66383 76670 84889 67148 64404 50023 67774 71536 69643 83817 70361 73410 103660 81154 81918 64553 88369 67405 68950 76301 80920 63944 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64219000 10294 1656 9736 19671;19672 15773 15773 1 9606 Homo sapiens 0.025806561748481727 GINTLVTYDMVPEPK Oxidation (M) 1691.844 0.84402321 3068 H3BNX8;P20674 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes no 0 1 0 6 0 1 58.116 58.185 4 1.9999E-07 17354 20230619_1886_Aki_TMTPro18x_K_F6 128.96 109.12 20667 14072 17343 23415 24991 22708 22229 23047 24211 23394 25958 27586 26944 22469 23266 27959 26726 30091 19065 12966 18039 22848 25249 23025 22636 23537 24629 23748 26603 27643 27291 23639 23941 28112 25561 28546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26400000 10295 3068 9737 19673 15774 15774 1792 1 9606 Homo sapiens 0.025774964321044536 GINTLVTYDMVPEPK Unmodified 1675.8491 0.84910859 3068 H3BNX8;P20674 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes no 0 0 0 7 0 1 61.819 61.858 3 0.010112 18644 20230619_1887_Aki_TMTPro18x_K_F7 64.675 52.759 442030 346570 469730 490420 408860 371090 409750 520550 507750 540510 527870 445930 534920 458190 458960 620110 442260 623930 408840 318490 473880 481980 428970 387860 416710 521740 512830 542080 540300 457980 542050 480940 468110 620210 424570 591910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 843430000 10296 3068 9737 19674 15775 15775 1 9606 Homo sapiens 0.038218002947132845 GIPAPEEER Unmodified 996.48762 0.4876242 3356 O95433;G3V438;H0YJU2 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 1.5 0.5 1 1 38.073 38.104 2 0.00015187 9195 20230619_1880_Aki_TMTPro18x_K_F1 147.19 126.63 218950 163210 198420 209970 248590 286910 231020 229500 314880 245170 282910 274460 300620 234950 243730 295760 299920 276620 202190 149860 204100 209150 254080 282910 236510 238810 314560 248040 292390 276090 303470 246910 252220 295020 286260 263020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 666030000 10297 3356 9738 19675;19676 15776;15777 15776 2 9606 Homo sapiens -0.01076010833151031 GIPEFWLTVFK Unmodified 1335.7227 0.72270951 661;2990 F8W543;H0YH88;P55209;F8VY35;H0YIV4;B7Z2V4;F5H4R6;F8W0J6;F8VUX1;A0A024RBB7;P55209-2;F8W020;F8VXI6;F8VV59;B7Z9C2;A0A024RBE6;P55209-3;F8W118;H0YHC3 NAP1L1 Nucleosome assembly protein 1-like 1 no no 0 0 0 4 0.816 1 1 1 66.346 66.377 3 5.0851E-05 20936 20230619_1883_Aki_TMTPro18x_K_F4 130.98 111.2 104530 83311 99959 84150 64137 83845 75880 77383 93559 112050 95897 96632 104970 88694 115210 112630 105850 102070 96608 76304 101280 85003 69919 84689 76468 80426 94528 110900 98722 98500 107310 93023 116440 112230 101340 97077 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 90158000 10298 2990;661 9739 19677;19678;19679 15778;15779 15778 2 9606 Homo sapiens 0.06827706642366138 GIPFRPVK Unmodified 912.55452 0.55452197 2954 F2Z2W7;Q8IZ69;H7BZZ4;H7C100 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes no 0 0 1 5.5 0.5 1 1 45.342 45.424 3 0.010762 11858 20230619_1886_Aki_TMTPro18x_K_F6 81.784 48.233 216590 182460 188770 220030 230120 238960 248130 239730 287350 228200 224110 228080 244300 199220 237980 263010 268590 247890 200100 167350 194890 219370 236220 240270 250240 244570 287890 231350 233870 230650 248410 209850 243920 262360 256550 235680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89982000 10299 2954 9740 19680;19681 15780 15780 1 9606 Homo sapiens 0.09474689239277723 GIPGLDVEDDEEGGGGAP Unmodified 1682.7271 0.72713878 1708 A0A7P0TAE3;Q9ULX6;A0A140VKH3;Q9ULX6-2 AKAP8L A-kinase anchor protein 8-like yes no 0 0 0 1 0 1 61.977 61.977 2 0.00055742 19304 20230619_1880_Aki_TMTPro18x_K_F1 108.67 103.17 9755.3 6899.5 9013.8 11063 9717.4 10792 9869.2 9778.7 9848.6 14168 13147 12735 13894 12656 15441 13694 12857 15972 9007.1 6352.9 9240.6 10818 10042 10907 9946.6 10179 10189 14034 13370 12987 14230 13116 15523 13878 12348 15135 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114560000 10300 1708 9741 19682 15781 15781 1 9606 Homo sapiens -0.08691570253927239 GIPHLVTHDAR Unmodified 1214.652 0.65200419 2202 Q96IR1;B2R491;P62701;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 0 0 0 7 0.816 1 1 1 34.695 34.733 3 6.0925E-18 7132 20230619_1887_Aki_TMTPro18x_K_F7 206.73 165.33 281930 174560 288640 322260 391030 394130 372700 392870 432090 342720 429130 427230 442640 368270 370510 295320 480400 438590 260350 161150 294380 313990 397300 392870 378680 400020 436390 351750 440930 427740 447910 378190 383620 306260 458290 415210 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 409540000 10301 2202 9742 19683;19684;19685 15782;15783;15784;15785 15784 4 9606 Homo sapiens 0.053264263774508436 GIPLESTDGER Unmodified 1172.5673 0.56733108 946;3413 P08651-5;Q6FI30;B7Z4T6;A0A286YEX4;P08651-4;P08651-3;P08651-6;P08651-2;P08651;Q13051;U3KQE8;A0A0A0MRX8;A0A1B0GU97;Q5VW28;A0A1B0GW37;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;A0A2R8Y7V8;O00712-4;O00712-5;A0A1B0GWJ4;B4DS74;U3KPY9;A0A0S2Z4H3;Q5W0Y9;O00712-2 NFIC;NFI;NFIB Nuclear factor 1 C-type;Nuclear factor 1;Nuclear factor 1 B-type no no 0 0 0 2 0.816 1 1 1 43.003 43.052 2 4.4373E-17 11432 20230619_1880_Aki_TMTPro18x_K_F1 236.89 210.43 413600 350610 354770 386690 495840 531910 521450 519400 619930 510730 562580 628640 581390 541850 490760 642070 738210 711420 382080 321290 367670 389560 504670 526650 527070 531110 623370 520410 581090 629890 589140 566900 515100 647020 703730 675080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 436030000 10302 3413;946 9743 19686;19687;19688 15786;15787 15786 2 9606 Homo sapiens -0.012049889498257471 GIPNERPTR Unmodified 1038.557 0.55704117 4346 Q96F86;H3BSQ0;H3BPN4;H3BPW9 EDC3 Enhancer of mRNA-decapping protein 3 yes no 0 0 1 6.5 0.5 1 1 29.992 30.061 3 0.0047753 5362 20230619_1887_Aki_TMTPro18x_K_F7 80.688 34.97 115070 79302 107020 106190 133410 136120 137980 150510 175310 130530 158060 180380 161090 151770 133020 134550 211700 202630 106240 72871 109770 105440 136590 135690 140000 152170 175630 134560 163220 179790 163180 156600 140090 139300 201730 191770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98334000 10303 4346 9744 19689;19690 15788;15789 15789 2 9606 Homo sapiens 0.03930492906260952 GIPNMLLSEEETES Oxidation (M) 1563.6974 0.69741856 321 A0A024R565;Q9UI30-2;Q9UI30 HSPC152;TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes no 0 1 0 1.5 0.5 1 1 59.062 59.068 2 0.041184 18313 20230619_1881_Aki_TMTPro18x_K_F2 61.398 50.568 26147 21736 25893 23495 21592 24154 26859 27483 29288 19505 27742 28035 28399 22767 24639 29527 26533 25891 24178 19916 26245 23615 22912 24457 26862 27638 29588 20408 28566 27923 28775 24007 25253 29348 25364 24632 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139640000 10304 321 9745 19691;19692 15790;15791 15791 194 2 9606 Homo sapiens -0.061882255236469064 GIPNMLLSEEETES Unmodified 1547.7025 0.70250394 321 A0A024R565;Q9UI30-2;Q9UI30 HSPC152;TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes no 0 0 0 1.5 0.5 1 1 63.272 63.276 2 0.004712 19824 20230619_1880_Aki_TMTPro18x_K_F1 75.294 65.607 68561 57773 71735 80992 75275 80761 71409 86808 86697 96092 96891 101520 105130 94849 93337 113990 109290 117730 63433 53072 72704 79864 77800 81810 72770 88475 87939 96752 99316 102600 106520 99053 96117 114390 104470 111750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150930000 10305 321 9745 19693;19694 15792;15793 15792 2 9606 Homo sapiens -0.04943921661015338 GIPNVLR Unmodified 767.46537 0.46537261 2688 B7Z4A1;O14949 UQCRQ Cytochrome b-c1 complex subunit 8 yes no 0 0 0 2.5 0.5 1 1 46.909 46.986 2 0.022762 12782 20230619_1882_Aki_TMTPro18x_K_F3 101.47 36.208 671350 571010 688940 776890 811430 845290 895810 875410 987930 768150 871820 824730 858780 762190 775280 856820 988770 990950 621070 524350 700830 768390 834900 850180 900950 889450 995790 784160 899060 833020 873420 793380 802040 866760 943990 939780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 357210000 10306 2688 9746 19695;19696 15794;15795 15795 2 9606 Homo sapiens 0.07233854279741081 GIPVELWAHYVEELNSTQR Unmodified 2240.1226 0.12258134 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;A2VDI1 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 8 0 1 64.003 64.024 3 2.1109999999999998E-19 19568 20230619_1888_Aki_TMTPro18x_K_F8 171.98 161.51 106080 79909 97303 117850 62181 29322 96312 102070 28328 220220 199490 204140 220280 183480 176060 265570 248430 251800 97974 73482 99114 114770 67806 38165 93266 102440 40290 215250 197560 207260 222030 194310 184300 264480 237020 239290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65920000 10307 2332 9747 19697 15796 15796 1 9606 Homo sapiens 0.05212494938496093 GIPVMGHSEGICHMYVDSEASVDK Oxidation (M) 2633.156 0.15600801 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 1 0 5 0 1 47.701 47.778 4 5.8784E-05 12819 20230619_1885_Aki_TMTPro18x_K_F5 80.98 73.727 15854 16373 19713 20167 19957 16407 23937 18522 14888 18824 24082 18221 18962 19502 33342 19388 20527 23009 14713 15010 19708 20012 20732 16944 23625 18808 16048 18980 24048 18593 20202 20062 32868 19734 19781 21807 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17373000 10308 3654 9748 19698 15797 15797 2349 1 9606 Homo sapiens -0.09524375458386203 GIPVVEHK Unmodified 877.50215 0.50215205 3433;1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9;J3KTB7 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 0 0 6.5 0.5 1 1 40.998 41.066 3 0.00031859 9652 20230619_1887_Aki_TMTPro18x_K_F7 148.38 107.44 95763 68342 84785 87704 86440 94634 83065 84069 125340 90236 104200 96301 105990 84157 77470 105070 98685 86822 88395 62762 87067 87066 89674 94929 85263 86795 124330 91143 107870 97137 106740 88307 80599 104160 94134 82701 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 328230000 10309 1843;3433 9749 19699;19700 15798;15799 15799 2 9606 Homo sapiens 0.05850106105663144 GIQEEMEALVK Unmodified 1245.6275 0.6274885 1284;4185 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q86U75 DPYSL2 Dihydropyrimidinase-related protein 2 no no 0 0 0 3.5 1.12 1 1 1 1 61.725 61.752 2;3 2.7148E-06 19136 20230619_1882_Aki_TMTPro18x_K_F3 163.9 93.842 397170 316270 405660 421260 278110 357490 401880 395140 392410 500600 525920 514380 526900 454170 503670 566140 547540 587360 367250 290430 409610 416010 302540 367060 398060 404050 405940 500400 533340 519630 536630 476420 515360 568110 523730 557510 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 631860000 10310 1284;4185 9750 19701;19702;19703;19704 15800;15801;15802;15803 15801 4 9606 Homo sapiens 0.014499853890583836 GIRDDIEEEDDQEAYFR Unmodified 2098.908 0.90795669 4199 Q86XP3;Q86XP3-2;J3KRE3 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 0 1 1 0 1 49.637 49.637 3 2.0956E-59 14192 20230619_1880_Aki_TMTPro18x_K_F1 303.14 263.23 156540 122030 126300 160200 122060 143460 165320 165090 160700 192660 192180 197210 196910 169720 204760 167680 170460 203560 144470 112060 130990 158400 128370 146800 164060 167930 165350 193260 196000 198940 201120 175930 205980 170680 163660 192840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 787650000 10311 4199 9751 19705 15804 15804 1 9606 Homo sapiens -0.09754096667893464 GIRPAINVGLSVSR Unmodified 1437.8416 0.84159587 3504 V9HW26;P25705;P25705-2;P25705-3 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 1 8 0 1 47.177 47.225 2 4.7776999999999997E-26 12358 20230619_1888_Aki_TMTPro18x_K_F8 203.51 156.43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10312 3504 9752 19706 15805 15805 1 9606 Homo sapiens 0.1401887359995726 GIRPAPGYPSQPDHTEK Unmodified 1848.9119 0.91186028 1636 A0A7P0TAV2;A0A6Q8PGK3;A0A7P0T9G7;B7ZLW8;Q99707;B4DST3;A0A7P0TAJ0;Q99707-2;Q6MZH4;B1ANE3 MTR;DKFZp686A22123 Methionine synthase yes no 0 0 1 7 0 1 36.615 36.683 4 1.0743E-38 7960 20230619_1887_Aki_TMTPro18x_K_F7 216.99 164.73 38482 32526 39188 38371 39783 45750 46753 43848 44652 54404 54927 59321 51690 44150 46644 58441 64753 60604 35596 29825 39761 38379 41458 45660 46678 45210 46058 54534 55760 59463 52636 46797 48582 58581 61751 57554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94257000 10313 1636 9753 19707 15806 15806 1 9606 Homo sapiens 0.0213608240708254 GIRPGLTTVLAR Unmodified 1252.7616 0.76155464 2566 B4DPK2;Q9NVH1-3;Q9NVH1;Q9NVH1-2;B4DGD5;Q9UMU8;B1AK20;Q5TH61 DNAJC11 DnaJ homolog subfamily C member 11 yes no 0 0 1 7 0 1 44.743 44.828 3 1.3196E-05 11233 20230619_1887_Aki_TMTPro18x_K_F7 135.6 76.173 103470 96503 98262 109380 118350 135120 141400 125520 161290 94110 98439 96109 115080 95023 124950 109250 102960 96551 95718 88426 100660 109750 122010 134460 141720 128090 160470 97009 104730 97514 117380 98800 125580 108920 98680 91863 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 243180000 10314 2566 9754 19708 15807 15807 1 9606 Homo sapiens 0.14528431996768632 GISAFPESDNLFK Unmodified 1423.6983 0.69834526 950 A0A0A0MSE8;Q5TZN3;B2R4U3;O00762-4;O00762;O00762-2 UBE2C Ubiquitin-conjugating enzyme E2 C yes no 0 0 0 6.5 0.5 1 1 61.649 61.688 3 7.9869E-05 18534 20230619_1887_Aki_TMTPro18x_K_F7 105.66 84.102 415500 338010 369740 363250 282440 354270 312040 330720 387900 434530 424810 387550 463850 390840 357440 401990 380540 437530 383830 309720 378010 364870 301680 358470 315580 342260 392650 432170 435430 395640 467010 403810 366880 405690 364270 414980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 586160000 10315 950 9755 19709;19710 15808;15809 15809 2 9606 Homo sapiens 0.0034440169822573807 GISAGAVQTAGK Unmodified 1058.572 0.57202253 3589 P46087;P46087-4;F5GWB7;F5H709 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 8 0 1 42.594 42.597 2 4.153E-25 10529 20230619_1888_Aki_TMTPro18x_K_F8 207.29 145.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10316 3589 9756 19711 15810 15810 1 9606 Homo sapiens 0.04507939983614051 GISCMNTTLSESPFK Unmodified 1670.7644 0.76439269 3922 Q15181;V9HWB5 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 0 0 1 0 1 58.112 58.112 2 2.0848E-05 17727 20230619_1880_Aki_TMTPro18x_K_F1 111.63 98.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10317 3922 9757 19712 15811 15811 1 9606 Homo sapiens -0.044158935135783395 GISCMNTTLSESPFK Oxidation (M) 1686.7593 0.75930731 3922 Q15181;V9HWB5 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 1 0 7.5 0.5 1 1 52.622 52.694 3 8.3857E-08 14705 20230619_1888_Aki_TMTPro18x_K_F8 128.95 116.79 381700 392680 417140 426110 425750 434850 420030 443060 460740 479340 506830 471310 515330 384040 470860 554950 508040 501200 353780 359560 420910 427910 441020 439520 425370 452990 469100 482110 517960 476180 523190 408250 482100 551650 485680 476630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1374400000 10318 3922 9757 19713;19714 15812;15813 15813 2596 2 9606 Homo sapiens -0.056601973761871704 GISDLAQHYLMR Oxidation (M) 1418.6976 0.69763375 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 1 0 1.5 0.5 1 1 52.39 52.41 3 7.8276E-06 15508 20230619_1881_Aki_TMTPro18x_K_F2 135.1 117.67 124020 109360 124100 127910 144140 157900 125610 131870 138750 93785 96981 95948 83815 69469 108970 98655 94146 89118 114730 100250 126360 128050 147630 156810 128160 135490 138840 96960 100950 96460 87152 74065 109500 98175 90186 84764 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 650260000 10319 2435 9758 19715;19716 15814 15814 1497 1 9606 Homo sapiens 0.00503283777516117 GISDLAQHYLMR Unmodified 1402.7027 0.70271913 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 2 0 1 55.176 55.197 3 1.0065E-45 16667 20230619_1881_Aki_TMTPro18x_K_F2 221.6 184.27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10320 2435 9758 19717 15815 15815 1 9606 Homo sapiens 0.01747587640124948 GISEETTTGVHNLYK Unmodified 1647.8104 0.8104149 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 0 5.75 1.48 1 1 1 1 45.286 45.356 3 2.5739000000000002E-20 11769 20230619_1885_Aki_TMTPro18x_K_F5 218.11 198.36 1461500 1237900 1449600 1532500 1382100 1607500 1452900 1484100 1458400 2112700 2009700 2075700 2162700 1854500 1766300 2226600 2142400 2352200 1351600 1135700 1473000 1524500 1443300 1617000 1462300 1541400 1510600 2099100 2042900 2100800 2183700 1940200 1826400 2237100 2047600 2232000 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 2911800000 10321 1439 9759 19718;19719;19720;19721 15816;15817;15818;15819;15820;15821;15822 15819 7 9606 Homo sapiens 0.012422109845829254 GISHVIVDEIHER Unmodified 1502.7841 0.78414057 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 5 1.41 1 1 1 1 1 43.778 43.851 4 1.1039000000000001E-45 11164 20230619_1883_Aki_TMTPro18x_K_F4 241.35 207.46 266960 207220 247370 301430 254860 297040 288220 309390 304050 332270 334560 305140 371100 293380 307800 376500 327980 368990 246620 190500 253380 296470 265170 300840 289270 315790 310270 333670 343190 310830 374400 307560 315610 376370 313900 350400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1660599999.9999998 10322 3811 9760 19722;19723;19724;19725;19726 15823;15824;15825 15824 3 9606 Homo sapiens 0.052859866037579195 GISLNPEQWSQLK Unmodified 1498.778 0.77799256 3649 Q6IBA2;Q59G24;P53999;B7Z1Z0 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes no 0 0 0 1.8 0.748 2 2 1 62.061 62.071 2;3 6.7042E-22 19286 20230619_1880_Aki_TMTPro18x_K_F1 237.87 177.62 454550 403900 450910 511130 435730 517020 508430 500520 551640 594150 537810 520450 607150 494430 498440 626020 571490 600700 420500 370550 458550 507390 456010 521910 509830 515020 559430 593170 555310 530900 612190 518010 513510 625180 546290 570710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1062999999.9999999 10323 3649 9761 19727;19728;19729;19730;19731 15826;15827 15826 2 9606 Homo sapiens 0.0485546837221591 GISQAEIR Unmodified 872.47158 0.4715802 3821 Q6AWA4;Q12789;Q6AHZ7;Q12789-3 DKFZp686O0870;GTF3C1;DKFZp686A111 General transcription factor 3C polypeptide 1 yes no 0 0 0 5 1 1 1 37.575 37.635 2 0.0065009 8523 20230619_1883_Aki_TMTPro18x_K_F4 110.38 38.885 76541 52022 68580 73758 108440 92453 92403 86941 102670 75950 96690 94941 91536 86446 82183 92218 127850 97893 70639 47837 70929 72922 108860 91990 94378 88919 103690 77983 99243 95279 93260 89710 86293 92877 121670 93029 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131810000 10324 3821 9762 19732;19733 15828 15828 1 9606 Homo sapiens 0.030243277206068342 GISQEQMNEFR Oxidation (M) 1353.5983 0.59831364 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;B4DFY0;B3KUX9;A1L0V1;B7Z2W3;H0YJW3;H7C5W8;H0YJ11;Q5ZEZ4 ACTN1 Alpha-actinin-1 yes no 0 1 0 2.5 0.5 1 1 39.206 39.267 2 0.0032228 9286 20230619_1882_Aki_TMTPro18x_K_F3 88.948 77.797 188010 132480 148890 152620 147910 153420 204550 174500 222200 228330 217370 218800 263480 187950 183390 281740 227780 220250 173400 121540 154530 152570 155230 155630 203390 178310 225260 227560 225200 221590 263430 199930 190890 277880 217460 209880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 186570000 10325 387 9763 19734;19735 15829;15830 15830 244 2 9606 Homo sapiens -0.06434158907245546 GISQEQMNEFR Unmodified 1337.6034 0.60339901 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;B4DFY0;B3KUX9;A1L0V1;B7Z2W3;H0YJW3;H7C5W8;H0YJ11;Q5ZEZ4 ACTN1 Alpha-actinin-1 yes no 0 0 0 3.5 0.5 1 1 45.658 45.718 2 1.0548E-16 12166 20230619_1882_Aki_TMTPro18x_K_F3 228.54 197.86 442740 335600 380040 347370 280210 376740 452060 429140 543220 605290 515470 531350 699200 517410 462900 677940 580610 573280 408720 307500 389720 350610 304340 379940 448600 439370 547660 599970 538070 542280 696100 542960 482530 672210 554330 545640 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 418200000 10326 387 9763 19736;19737 15831;15832;15833 15831 3 9606 Homo sapiens -0.05189855044613978 GISQEQMQEFR Oxidation (M) 1367.614 0.6139637 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3;A0A0S2Z3X3;A0A0S2Z3C0 ACTN4 Alpha-actinin-4 yes no 0 1 0 3 0 1 39.148 39.202 2 0.0067465 9264 20230619_1882_Aki_TMTPro18x_K_F3 76.228 44.806 32857 26352 30860 32581 37355 36048 36561 34662 42579 39335 44401 43428 45870 30660 39324 41901 41380 41924 30363 24180 31617 32439 38235 36174 37093 35639 43104 39626 45521 43473 46396 32677 40231 41920 39576 39817 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42522000 10327 1069 9764 19738 15834 15834 632 1 9606 Homo sapiens -0.05513872390179131 GISQEQMQEFR Unmodified 1351.619 0.61904908 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3;A0A0S2Z3X3;A0A0S2Z3C0 ACTN4 Alpha-actinin-4 yes no 0 0 0 3.5 0.5 1 1 45.843 45.902 2 1.7385E-08 12147 20230619_1883_Aki_TMTPro18x_K_F4 175.49 121.07 80276 67811 84831 88370 75018 92621 88766 92752 100800 106560 115730 118380 111670 100930 111440 115470 124590 134760 74279 62242 85682 87611 79139 93308 89127 95113 102620 107290 117890 119040 114140 105460 114080 116870 119150 127760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139910000 10328 1069 9764 19739;19740 15835;15836 15836 2 9606 Homo sapiens -0.042695685275703 GISSQPFPELHCAALK Unmodified 1753.8821 0.88214006 2051 A8K4T6;Q16401-2;Q16401;Q4VXH0 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes no 0 0 0 1.5 0.5 1 1 53.51 53.524 3 4.6258E-08 15777 20230619_1880_Aki_TMTPro18x_K_F1 125.22 106.85 64279 55598 63363 62370 56634 78265 74580 68645 83712 80772 68499 71395 81116 68027 60356 95293 80833 83709 59451 50953 64364 62658 59969 77688 74420 71114 84190 80721 71551 72809 81425 71723 63065 94564 77162 79619 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104340000 10329 2051 9765 19741;19742 15837 15837 1 9606 Homo sapiens 0.03535427137444458 GISVNAEQVR Unmodified 1071.5673 0.5672715 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;B4E263;A2VDI1;B3KWS1;B7ZAU8 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 5 0 1 40.096 40.186 2 2.3634E-07 9609 20230619_1885_Aki_TMTPro18x_K_F5 190.88 151.92 139420 117070 129210 139080 176560 167930 166100 153480 211770 147330 149810 136350 151010 109050 145790 190960 179350 121520 128860 107360 132860 139030 179240 167380 169380 157650 210530 149040 156590 138180 153790 117700 150430 186570 170880 116370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122500000 10330 2332 9766 19743 15838 15838 1 9606 Homo sapiens 0.034350558408505094 GITAFIVEK Unmodified 976.55933 0.55933258 961 A0A384MR53;A0A0A0MT83;A0A2L0RI93;A0A2L0RI88;A0A2L0RI76;P26440;A0A0S2Z4K7;P26440-2;A0A2L0RIE3;H0YLC3;H7C4G6;H0YKV0 IVD Isovaleryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 1 0 1 60.231 60.231 3 0.001749 18596 20230619_1880_Aki_TMTPro18x_K_F1 92.051 68.623 26288 21046 24587 27302 25694 28090 23482 26978 33356 25308 25561 28025 30029 27202 28234 29643 28700 33678 24292 19320 25145 27065 26564 28318 24122 27590 33099 25769 26806 28299 30435 28215 28776 29972 27490 31927 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17523000 10331 961 9767 19744 15839 15839 1 9606 Homo sapiens 0.0701152859138574 GITALQADIK Unmodified 1028.5866 0.58660996 4270 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 7 0 1 53.934 54.001 2 8.5027E-05 15344 20230619_1887_Aki_TMTPro18x_K_F7 159.4 117.42 74573 50853 62932 75147 76291 98013 83788 84182 102710 85464 82644 82694 83060 67446 78327 92338 88273 75806 68795 46784 65198 74137 78553 96985 84598 86971 102730 86260 85757 83575 84533 71381 80354 91431 84277 72222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80873000 10332 4270 9768 19745 15840 15840 1 9606 Homo sapiens 0.07346012131733914 GITGVDLFGTTDAVVK Unmodified 1591.8457 0.84573777 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3ITV3;A0A3B3ISK1;A0A3B3IU78 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 7 0 1 62.652 62.688 2 3.3536E-14 19023 20230619_1887_Aki_TMTPro18x_K_F7 208.72 156.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10333 3647 9769 19746 15841 15841 1 9606 Homo sapiens 0.07348873512341925 GITGVEDK Unmodified 817.41815 0.41814765 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B4DVU1;E9PFF2 HEL107;TKT Transketolase yes no 0 0 0 3.5 0.5 1 1 42.82 42.875 2 0.0020075 10843 20230619_1882_Aki_TMTPro18x_K_F3 143.01 50.54 406580 237460 515990 528320 615650 697560 518620 577910 819720 536390 795240 919450 755060 721380 714400 409260 934450 912740 376120 219940 516610 511220 629440 689140 538050 597540 815780 556600 816000 908230 770670 734300 737510 445560 891800 861670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 437940000 10334 3523 9770 19747;19748 15842 15842 1 9606 Homo sapiens 0.0021353021809318307 GITHIGYTDLPSR Unmodified 1428.7361 0.73612775 87 Q2TB59;A0A024R0C3;Q13423;A0A590UJM2;A0A590UK29;E9PCX7;A0A590UK15;A0A590UJI3 NNT NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 8 0 1 44.787 44.815 3 1.4124E-08 11423 20230619_1888_Aki_TMTPro18x_K_F8 166.48 139.38 74050 77576 78554 78366 90625 99477 112120 94577 92751 107810 97407 110400 123440 80152 102610 130100 112190 116660 68626 70986 79632 79405 93654 98919 111150 97336 95893 108270 100970 110930 124010 86410 105390 129080 107280 110930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288670000 10335 87 9771 19749 15843 15843 1 9606 Homo sapiens 0.038909126837097574 GITINAAHVEYSTAAR Unmodified 1672.8533 0.85328277 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 7.5 0.5 1 1 44.303 44.354 3 8.7962E-92 11202 20230619_1888_Aki_TMTPro18x_K_F8 305.19 289.81 178100 149250 166510 180200 167110 184430 198920 209310 201920 202680 196350 204750 208650 170420 196980 233810 219050 224390 164620 136890 170220 179550 174370 186760 198860 211900 205380 205170 202350 206650 211980 180300 201940 233300 209410 213210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1127100000 10336 1417 9772 19750;19751 15844;15845 15845 2 9606 Homo sapiens 0.04377025832650361 GITNLCVIGGDGSLTGADTFR Unmodified 2123.0317 0.031717419 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;F8VZQ1;F8VX13 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 7 0 1 61.871 61.91 3 6.1068E-05 18669 20230619_1887_Aki_TMTPro18x_K_F7 80.702 70.945 39478 43201 49985 37107 36886 55806 54528 48732 49687 45261 44690 40184 60518 46511 51198 58202 44933 61018 36661 39477 49657 38285 39887 54842 53810 50172 50690 45799 46761 41295 60776 48427 51925 58431 43163 57866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209180000 10337 116 9773 19752 15846 15846 1 9606 Homo sapiens 0.015122828987387038 GITPNFMK Unmodified 906.46332 0.4633237 2648 B7ZB41;B4E290;Q6NUK1-2;Q6NUK1 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes no 0 0 0 3 0 1 52.775 52.834 2 0.0082805 15414 20230619_1882_Aki_TMTPro18x_K_F3 105.14 67.002 147440 149300 161050 162160 191250 201600 175660 182550 216910 97576 93090 74973 89410 86449 143840 112190 117370 76804 136640 136710 162910 163280 195790 200480 179240 185510 213370 102740 101180 77726 94084 90074 143650 110470 112270 73473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57148000 10338 2648 9774 19753 15847 15847 1 9606 Homo sapiens 0.006350574796442743 GIVDLIEER Unmodified 1042.5659 0.56587452 2867 E5KND5;Q96RP9;Q96RP9-2;C9IZ01;D3DNL3;F8WAU4 GFM1 Elongation factor G, mitochondrial yes no 0 0 0 2 0 1 58.894 58.907 2 0.00011683 18159 20230619_1881_Aki_TMTPro18x_K_F2 152.89 67.244 206240 182340 181180 215000 191150 219470 248510 247650 262570 252420 243650 229800 281320 236750 245770 309320 264360 280010 190610 167170 186540 214540 199390 222230 247620 251150 265980 254170 252450 234760 284230 247820 251920 307840 252860 266210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 43261000 10339 2867 9775 19754 15848;15849 15848 2 9606 Homo sapiens 0.04629421752088092 GIVDQSQQAYQEAFEISK Unmodified 2039.98 0.97999942 2805 D0PNI1;P63104;B0AZS6;P63104-2;B7Z2E6;H0YB80;Q2F831 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 0 5.25 0.661 1 4 3 61.504 61.549 2;3;4 3.2112E-23 18559 20230619_1885_Aki_TMTPro18x_K_F5 223.06 185.88 329660 291680 305800 330330 258830 306540 301680 299630 348830 395290 398050 436770 432050 418310 389170 493120 445730 513010 304800 267310 312060 330200 273990 311700 303320 309260 354920 395600 407840 440870 438220 435840 400210 495140 426390 486800 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 26446000000 10340 2805 9776 19755;19756;19757;19758;19759;19760;19761;19762 15850;15851;15852;15853 15850 4 9606 Homo sapiens 0.0016086247646853735 GIVDQSQQAYQEAFEISKK Unmodified 2168.075 0.074962442 2805 D0PNI1;P63104;B0AZS6;P63104-2;B7Z2E6;H0YB80;Q2F831 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 1 7.25 0.829 1 1 2 59.329 59.377 3;4 1.6905999999999998E-19 17517 20230619_1888_Aki_TMTPro18x_K_F8 178.88 159.16 508530 550130 563600 464110 497390 361220 422080 492180 345530 522130 529200 382780 506280 361600 565470 503790 522270 388810 471590 502660 565940 475430 518000 377210 428480 494380 364560 521210 532560 394790 519610 381500 571190 497790 499200 371000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2630300000 10341 2805 9777 19763;19764;19765;19766 15854;15855 15855 2 9606 Homo sapiens 0.0376479594765442 GIVEESVTGVHR Unmodified 1281.6677 0.66771383 86 A0A024R0A8;O43865;Q2NKW8;V5YQL4;O43865-2;Q6ZMM9;H0Y8B3;Q6ZNS6;Q96HN2-4;Q96HN2-3;Q96HN2-2;Q96HN2 AHCYL1;FGFR2-AHCYL1;AHCYL2 Adenosylhomocysteinase;Putative adenosylhomocysteinase 2;Putative adenosylhomocysteinase 3 yes no 0 0 0 3.5 0.5 1 1 40.219 40.268 3 6.457300000000001E-25 9645 20230619_1883_Aki_TMTPro18x_K_F4 264.17 244.93 66534 49431 65229 76078 84093 91577 84420 88083 108370 90016 91392 88240 81855 78584 83954 77605 94295 98060 61477 45482 66726 74795 85891 91310 85818 90251 108320 90856 94132 89306 84022 81331 85868 79174 90147 92908 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106630000 10342 86 9778 19767;19768 15856;15857 15857 2 9606 Homo sapiens 0.03814668103859731 GIVEFASK Unmodified 849.45962 0.45961853 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 7 0.816 1 1 1 51.988 52.064 2 0.0027265 14488 20230619_1887_Aki_TMTPro18x_K_F7 131.06 86.615 879230 668390 747870 866350 832450 1029400 922280 919540 1085500 1040600 987530 996910 1200100 966850 735270 1212200 523120 1169500 811630 613720 772810 860500 861790 1025700 929620 950130 1093100 1044100 1026600 1013300 1195100 1011600 747120 1210400 507040 1108900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3486499999.9999995 10343 1450 9779 19769;19770;19771 15858;15859 15859 2 9606 Homo sapiens 0.028867109774296296 GIVEFSGK Unmodified 835.44397 0.44396847 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V464;A0A7I2V4N2;H7C367;C9IZL7 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 7 0.816 1 1 1 50.27 50.348 2 0.0007217 13703 20230619_1887_Aki_TMTPro18x_K_F7 157.58 90.585 2494500 1852000 2046400 2399800 2215500 2974000 2550400 2390100 3316200 3077900 3108600 3374200 3967400 3142700 2613500 4316500 4211000 4169900 2301800 1700700 2121600 2384900 2303500 2948800 2574900 2500900 3327100 3084600 3236800 3405500 3957900 3312200 2778900 4305000 4013400 3962300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2139699999.9999998 10344 1112 9780 19772;19773;19774 15860;15861;15862 15861 3 9606 Homo sapiens 0.019664244603859515 GIVEFSGKPAAR Unmodified 1230.6721 0.67207093 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V464;A0A7I2V4N2;H7C367;C9IZL7 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 1 2.5 0.5 1 1 44.657 44.734 3 2.8595E-05 11737 20230619_1882_Aki_TMTPro18x_K_F3 123.01 96.301 954910 753990 903180 852930 997510 997330 960610 989850 1095600 987600 1070900 949210 1043900 813200 1093900 922720 954670 728930 882390 691280 922700 855620 1027100 997840 975190 1011400 1107400 997150 1098100 961060 1067800 849160 1102800 915470 913200 695220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2891000000 10345 1112 9781 19775;19776 15863;15864 15864 2 9606 Homo sapiens 0.0659617731741946 GIVEHEEQK Unmodified 1067.5247 0.52473799 4107 Q9P0Q6;Q6GVN4;Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes no 0 0 0 2 0.816 1 1 1 34.895 34.934 3 4.1922E-05 7632 20230619_1881_Aki_TMTPro18x_K_F2 147.75 93.979 92937 52805 90650 101900 127210 130150 115710 107880 137890 113580 123530 113640 127170 102460 97166 83897 149380 125160 85755 48802 92886 99122 128880 128890 117970 111910 138600 114570 127470 114930 128260 105190 102120 86972 142260 118530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107660000 10346 4107 9782 19777;19778;19779 15865 15865 1 9606 Homo sapiens -0.006323392873810008 GIVFEDVK Unmodified 905.48583 0.48583328 1063 P11310-2;P11310;Q5HYG7;Q5T4U5;A0A0S2Z366;B4DWX6;B7Z9I1;F6YB23;A0A7P0TB51;A0A7P0T8G6;B4DJE7;A0A7P0TB55;B4DVB1;B4DVE0;A0A0S2Z3A5 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 4.5 0.5 1 1 54.476 54.492 2 0.00064823 15600 20230619_1885_Aki_TMTPro18x_K_F5 136.16 89.589 148660 126800 147280 145980 156320 192370 163060 159560 208240 163610 176800 175460 196790 166220 148670 200930 193340 210820 137490 116240 149880 146480 162070 190220 165400 165370 208220 165640 183680 177360 197970 173620 154780 201750 184680 200070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67733000 10347 1063 9783 19780;19781 15866;15867 15867 2 9606 Homo sapiens 0.029309801489034726 GIVGGGMMR Unmodified 876.43098 0.43097772 755 Q9UN86;Q9UN86-2;A0A024RDE5;A0A024RDB2;A8K6V7;A0A7I2YQD9;A0A7I2V3P9;A0A7I2V647 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 0 2 0 1 43.23 43.311 2 0.022039 11359 20230619_1881_Aki_TMTPro18x_K_F2 71.852 36.747 235920 156970 259950 239330 274470 319240 274090 287690 353170 239870 271270 304530 284480 239750 300770 184810 335660 307020 218080 144480 262180 235920 284130 315840 278860 294740 351690 247160 283050 303730 290750 246710 306790 193840 320620 290420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71754000 10348 755 9784 19782 15868 15868 1 9606 Homo sapiens -0.01218053195009361 GIVGGGMMR 2 Oxidation (M) 908.42081 0.42080696 755 Q9UN86;Q9UN86-2;A0A024RDE5;A0A024RDB2;A8K6V7;A0A7I2YQD9;A0A7I2V3P9;A0A7I2V647 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 2 0 6.5 1.12 1 1 1 1 32.224 32.277 2 0.075843 6427 20230619_1888_Aki_TMTPro18x_K_F8 57.335 31.259 45396 39259 41059 44106 56317 53178 52883 55961 59754 39074 46248 39647 40233 31663 38298 44403 48117 34351 41958 35979 42310 44280 57140 53177 53723 56508 59876 40435 47777 40009 41162 33592 39549 43840 45848 32784 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 66542000 10349 755 9784 19783;19784;19785;19786 15869 15869 457;458 1 9606 Homo sapiens -0.0370666092024976 GIVLLEELLPK Unmodified 1222.7537 0.75367529 4726 Q9Y3D6 FIS1 Mitochondrial fission 1 protein yes yes 0 0 0 1 0 1 65.975 65.975 3 0.031512 20904 20230619_1880_Aki_TMTPro18x_K_F1 58.223 38.437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10350 4726 9785 19787 15870 15870 1 9606 Homo sapiens 0.15120859956641652 GIVPLAK Unmodified 696.45341 0.45341094 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DJ98;A0A8I5KYJ6;A0A8I5KXE2;A0A8I5KP58;A0A8I5QJM1;H7BZJ3;A0A8I5QKT6 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 2.67 0.471 1 2 50.33 50.394 2;3 0.0063147 14257 20230619_1882_Aki_TMTPro18x_K_F3 126.05 65.04 444240 348630 358190 391530 441460 501030 474000 476240 552710 502030 542780 569930 591450 466400 518320 632560 619530 598850 410010 319620 372530 393400 453240 497790 478380 488820 558140 508120 559650 572160 598480 493360 534560 630760 591640 569220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2236000000 10351 2389 9786 19788;19789;19790 15871;15872 15871 2 9606 Homo sapiens 0.09304237536559867 GIVQSEEK Unmodified 888.45526 0.45526144 4113 Q6NX51;Q96A65;B7Z321;B7Z689;B7Z502;B3KTF7 EXOC4 Exocyst complex component 4 yes no 0 0 0 3 0 1 39.601 39.655 2 0.0062321 9465 20230619_1882_Aki_TMTPro18x_K_F3 111.17 56.618 26265 19475 32988 38265 42013 45854 36527 40822 40569 30149 46548 42362 39851 32839 40731 26336 46343 45933 24324 17981 33117 37154 42757 45640 37295 41763 41282 31425 47158 42136 40917 33873 41629 27713 44284 43422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11648000 10352 4113 9787 19791 15873 15873 1 9606 Homo sapiens 0.006572017638632133 GIVSAVGIQAR Unmodified 1069.6244 0.62439245 4786 yes no 0 0 0 7.5 0.5 2 2 38.953 38.978 2 0.0090495 9022 20230619_1888_Aki_TMTPro18x_K_F8 75.696 48.812 + 592110 423370 425300 442260 538390 691860 412840 414530 643410 126790 165110 119950 76301 85282 210310 173650 250170 120660 545800 388050 447680 448290 548680 674140 430400 435000 621640 144650 187880 121490 87589 93602 213450 170220 238080 115640 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1459299999.9999998 10353 4786 9788 19792;19793;19794;19795 15874;15875 15875 2 9606 Homo sapiens 0.09236523117237994 GIVVYTGDR Unmodified 978.51345 0.51344502 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 6.5 0.5 1 1 44.393 44.48 2 0.0003546 11119 20230619_1887_Aki_TMTPro18x_K_F7 138.78 109.45 130320 96530 108110 129130 146480 178770 153650 162860 204120 159460 168350 169700 168050 138820 153280 167590 221700 184900 120270 88673 112410 128310 149580 176550 156000 167310 203530 161740 174390 170780 170890 145780 159960 168870 211200 175570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 477180000 10354 3387 9789 19796;19797 15876 15876 1 9606 Homo sapiens 0.023328834091330464 GIWHNDNK Unmodified 982.46208 0.46207815 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;H0YJG0;B4DNF8;B4DUP1;B2R892;P06732 HEL-S-29;CKB;HEL-211;CKM Creatine kinase B-type;Creatine kinase M-type;Creatine kinase M-type, N-terminally processed yes no 0 0 0 7 0.816 1 1 1 38.126 38.168 3 0.00033222 8765 20230619_1886_Aki_TMTPro18x_K_F6 147.29 119.46 607210 477730 612600 625230 603050 591790 620700 625380 716010 767130 866910 864770 890660 784580 790330 764810 999310 841350 561370 438640 621640 618930 627100 601950 628120 640500 730270 770550 883300 870520 903780 810860 816710 773420 953020 798890 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 5193600000 10355 3441 9790 19798;19799;19800 15877;15878;15879;15880 15877 4 9606 Homo sapiens -0.029854405649189175 GIWHNNEK Unmodified 996.47773 0.47772821 3442 P12532;P12532-2;F8WCN3;B4DH34;E9PCP8;B4DFE8;B4DGR9;B4DF55;B4DF72;B4DJW9;B7Z9T7 CKMT1A;CKMT1B Creatine kinase U-type, mitochondrial yes no 0 0 0 6.5 0.5 1 1 37.594 37.665 3 0.0001425 8317 20230619_1887_Aki_TMTPro18x_K_F7 163.99 125.19 253020 201480 231110 215520 107870 114690 169900 172280 194120 264200 310920 329760 308680 275370 311180 289570 357990 307180 233760 184630 234580 215420 123520 125130 168790 174660 201160 263870 313570 329810 315300 286500 318810 291870 341720 291760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 394410000 10356 3442 9791 19801;19802 15881;15882 15882 2 9606 Homo sapiens -0.020651540478638708 GIWLEAGK Unmodified 872.4756 0.47560295 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 8 0 1 55.174 55.241 2 0.0016577 15816 20230619_1888_Aki_TMTPro18x_K_F8 124.08 71.363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10357 1292 9792 19803 15883 15883 1 9606 Homo sapiens 0.03426417214336652 GIYAVGDVCGK Unmodified 1137.5488 0.54884425 3371 V9HW90;P00390-2;P00390-3;P00390;P00390-5;P00390-4 HEL-75;GSR Glutathione reductase, mitochondrial yes no 0 0 0 6.8 0.748 2 2 1 50.732 50.809 2;3 2.1011E-08 13873 20230619_1888_Aki_TMTPro18x_K_F8 171.56 131.21 171910 135660 160860 186780 174880 186040 191630 203030 204080 209950 210250 186590 227770 175460 148820 245760 224140 201090 158840 124620 164690 184380 180950 188550 192680 206390 207540 211050 215930 190300 228100 185120 157410 243040 213560 191550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 621710000 10358 3371 9793 19804;19805;19806;19807;19808 15884;15885 15885 2 9606 Homo sapiens -0.014428221253638185 GIYAYGFEK Unmodified 1046.5073 0.50729701 2105;3883;543 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3QLN6;J3KS25;J3QKZ9;B4E047;B4E102;Q86WD0;E7EMV8;J3KS93;J3KT04;Q59GT8;F8WE11;E9PBH4;J3QQP0;Q5JWW0;C9JUF0;Q14240;Q14240-2;E7EQG2;J3KSN7;P38919;A0A024R8W0;I3L3H2 EIF4A1;EIF4A2;DKFZp566L241;EIF4A3;DDX48 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 0 0 0 5.33 3.09 1 1 1 55.278 55.32 2;3 0.00019848 15889 20230619_1887_Aki_TMTPro18x_K_F7 126.41 76.994 649600 523550 586470 663340 566990 779620 648050 701160 802540 760860 674050 624570 783820 615180 654560 845710 760370 665340 600120 480500 601360 659790 594270 777270 653630 723040 803990 761830 702000 640350 790160 647170 674740 835530 725830 634210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1906699999.9999998 10359 2105;3883;543 9794 19809;19810;19811 15886;15887;15888 15887 3 9606 Homo sapiens -0.014096348223802124 GIYAYGFEKPSAIQQR Unmodified 1826.9315 0.93153309 2105;3883;543 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3QLN6;J3KS25;J3QKZ9;B4E047;B4E102;Q86WD0;E7EMV8;J3KS93;J3KT04;Q59GT8;F8WE11;E9PBH4;J3QQP0;Q5JWW0;Q14240;Q14240-2;E7EQG2;J3KSN7;P38919;A0A024R8W0;I3L3H2 EIF4A1;EIF4A2;DKFZp566L241;EIF4A3;DDX48 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 0 0 1 3.5 0.5 1 1 52.524 52.565 3 4.1461E-26 15285 20230619_1882_Aki_TMTPro18x_K_F3 237.59 218.81 564830 707490 948380 821810 1070900 778940 1154800 845390 322110 697140 860030 188450 107430 78281 1456000 74509 75295 68791 526950 647880 932310 820600 1098400 793760 1134000 855870 397350 695610 822440 212170 195620 84779 1373000 79081 85343 65422 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 614270000 10360 2105;3883;543 9795 19812;19813 15889;15890 15889 2 9606 Homo sapiens 0.0511445841789282 GIYFADMVSK Unmodified 1129.5478 0.54778161 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 3.67 3.09 1 1 1 60.576 60.591 2;3 3.5686E-05 18031 20230619_1888_Aki_TMTPro18x_K_F8 152.34 96.665 242040 185440 213800 242540 205760 252720 230750 227770 274470 273000 263150 263720 295790 262450 272620 328670 293550 317250 223500 170280 219600 240310 215360 254130 232600 235670 276790 273270 271980 268200 299850 274220 279100 328420 280830 301360 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 524610000 10361 261 9796 19814;19815;19816 15891;15892;15893 15893 3 9606 Homo sapiens -0.011810364942903107 GIYLWDVEGR Unmodified 1206.6033 0.60332266 1194 A0A140VJQ4;P04181 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes no 0 0 0 6 0 1 60.966 61.024 2 2.1716E-05 18573 20230619_1886_Aki_TMTPro18x_K_F6 159.58 129.02 239550 207230 233610 238760 173890 226420 235800 226260 293790 263140 262270 300680 231940 249390 381460 272060 319700 372090 221540 189960 236980 238450 187380 229870 236000 232250 294610 265160 269820 301600 245130 260060 381260 278960 306850 352160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 294900000 10362 1194 9797 19817 15894 15894 1 9606 Homo sapiens 0.00828513017700061 GIYPHEPK Unmodified 939.48142 0.48141661 2315 B5MCF9;B2RDF2;O00541;O00541-2 PES1 Pescadillo homolog yes no 0 0 0 6 0.816 1 1 1 37.905 37.982 3 0.0011849 8685 20230619_1886_Aki_TMTPro18x_K_F6 107.66 76.292 294500 219210 273190 268160 333750 330680 316100 298500 382650 373050 360700 365610 428040 325780 333450 457170 434260 376260 272000 201180 280110 267650 341240 329040 321750 309150 385400 372880 374000 370280 430080 344370 346960 452410 414120 358440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 279090000 10363 2315 9798 19818;19819;19820 15895;15896;15897 15896 3 9606 Homo sapiens 0.009255157259872249 GIYPSETFTR Unmodified 1169.5717 0.57168818 3845 Q13257;Q13257-2 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes no 0 0 0 6.5 0.5 1 1 47.613 47.698 2 2.4998E-09 12877 20230619_1886_Aki_TMTPro18x_K_F6 197.81 163 522700 407020 429130 470080 390440 485840 442870 416200 496770 602200 519450 477160 617330 495760 457880 645960 550300 531490 482460 373270 443390 469780 410760 488510 445280 435060 504690 594830 535730 490870 619210 518820 474540 639780 525500 506090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 641260000 10364 3845 9799 19821;19822 15898;15899 15898 2 9606 Homo sapiens -0.00631479736239271 GKDQVVILHHMLSK Unmodified 1603.8868 0.8868315 4491;3802 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 NAT10 N-acetyltransferase 10 no no 0 0 1 4 0 1 48.065 48.105 5 9.4351E-05 13089 20230619_1883_Aki_TMTPro18x_K_F4 102.38 90.512 79000 61126 78061 71156 97411 113920 97882 94691 101950 94685 110860 88966 95514 70263 74371 93221 110010 81085 73017 56062 79642 71612 99702 111490 98788 98019 103950 95532 112470 90030 96917 74346 78057 92580 104710 77250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 513540000 10365 3802;4491 9800 19823 15900 15900 1 9606 Homo sapiens 0.10904356070864196 GKDSLYAQGK Unmodified 1065.5455 0.54547343 3022 H0Y5B4;H7BZ11;J3KQN4;P83881;H7BY91;H0Y3V9 RPL36A;RPL36A-HNRNPH2 60S ribosomal protein L36a yes no 0 0 1 4.5 3.5 1 1 40.748 40.744 3 0.00071631 10421 20230619_1880_Aki_TMTPro18x_K_F1 100.55 66.168 109440 88141 190440 161860 268390 148060 244620 177820 81487 105490 145400 60661 59349 44711 212160 41499 57499 55427 101800 81269 187580 157220 270110 151730 242950 177880 94861 108930 142220 63343 70305 46580 203580 43086 56496 52505 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73551000 10366 3022 9801 19824;19825 15901;15902 15901 2 9606 Homo sapiens 0.015322510922715082 GKEDEGEEAASPMLQIQR Oxidation (M) 2002.9266 0.92658365 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 1 2.5 0.5 1 1 42.17 42.241 3 2.0227E-06 10857 20230619_1881_Aki_TMTPro18x_K_F2 109.03 101.01 117120 101100 118100 129440 130210 125310 137340 136910 145460 153030 177830 177110 166940 136740 165020 179940 171850 185900 108340 92774 120120 128340 134320 127350 138360 139520 149020 154460 180460 177390 170580 144680 168310 180410 164460 176460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 119600000 10367 3881 9802 19826;19827 15903;15904 15903 2549 2 9606 Homo sapiens -0.034762582977009515 GKEDEGEEAASPMLQIQR Unmodified 1986.9317 0.93166902 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 3 0.816 1 1 1 46.476 46.543 3 5.3051E-24 12859 20230619_1881_Aki_TMTPro18x_K_F2 210.17 207.2 347280 302570 341030 364660 300670 382260 368580 367520 402920 472140 458010 488240 519560 408060 453180 546740 501440 540930 321200 277470 346550 363430 317730 384800 368910 379300 411110 471880 470220 492160 524930 431060 465190 546570 479580 513700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 464070000 10368 3881 9802 19828;19829;19830 15905;15906;15907 15905 3 9606 Homo sapiens -0.022319544350693832 GKEEQMNTMK Unmodified 1194.5373 0.53729328 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7 KTN1 Kinectin yes no 0 0 1 6 0 1 38.908 38.99 3 0.026143 9111 20230619_1886_Aki_TMTPro18x_K_F6 84.821 67.192 30270 19936 44200 39631 41043 39071 33319 38696 39726 44042 56976 52406 56566 46021 55398 26633 63192 53581 28062 18420 43647 38378 42598 39530 34305 39698 40808 44466 57599 52564 57665 46710 56613 28685 60319 50641 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12958000 10369 380 9803 19831 15908 15908 1 9606 Homo sapiens -0.05219387211036519 GKFEDMAK Unmodified 924.4375 0.43750288 772 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;A0A286R9D9;B2RPK0;D3DQY9;Q75MM1;A0A286R9F1;Q53TD0;P23497 HMGB1;HMGB1P1;hCG_1991922;WUGSC:H_NH0244E06.1;SP100 High mobility group protein B1;Putative high mobility group protein B1-like 1;Nuclear autoantigen Sp-100 yes no 0 0 1 5.5 1.12 1 1 1 1 44.305 44.38 3 0.013901 11073 20230619_1887_Aki_TMTPro18x_K_F7 74.464 39.169 2436900 1882800 2259800 2530500 2523100 2930600 2571500 2673600 3214300 2443200 3107300 2565200 2660000 2086000 2744500 2707400 3157900 2320800 2251200 1729300 2316100 2506700 2603800 2926200 2610200 2742800 3230000 2486600 3169900 2585400 2732300 2200400 2811600 2689500 3011700 2211500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5590600000 10370 772 9804 19832;19833;19834;19835 15909;15910;15911 15911 3 9606 Homo sapiens -0.027738367626511717 GKFEDMAK Oxidation (M) 940.43242 0.43241751 772 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;A0A286R9D9;B2RPK0;D3DQY9;Q75MM1;A0A286R9F1;Q53TD0;P23497 HMGB1;HMGB1P1;hCG_1991922;WUGSC:H_NH0244E06.1;SP100 High mobility group protein B1;Putative high mobility group protein B1-like 1;Nuclear autoantigen Sp-100 yes no 0 1 1 5.5 1.12 1 1 1 1 38.95 39.02 3 0.051432 8838 20230619_1887_Aki_TMTPro18x_K_F7 63.076 37.938 198350 150560 181320 196450 260480 254130 229000 247200 280140 197530 248080 212030 217840 188190 234760 209290 250340 191130 183190 138260 186850 195360 263300 252480 234290 251580 280910 202870 254510 213990 224140 195970 239110 209090 238970 181950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1747099999.9999998 10371 772 9804 19836;19837;19838;19839 15912 15912 468 1 9606 Homo sapiens -0.04018140625260003 GKGEAGNSDSMCLR Unmodified 1480.6399 0.63986087 3588 P46013;P46013-2;B4DRH3 MKI67 Antigen KI-67 yes no 0 0 1 5 0 1 36.472 36.563 3 0.00048832 8101 20230619_1885_Aki_TMTPro18x_K_F5 91.845 77.587 40890 31459 39089 37781 34280 40384 34739 36355 42763 48019 39416 31179 49034 32086 29082 43671 41648 28196 37782 28862 39773 37679 36039 40549 35273 37718 43037 47393 40934 32466 48734 33718 30692 42795 39634 26994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20552000 10372 3588 9805 19840 15913 15913 1 9606 Homo sapiens -0.08123346210186355 GKGEQIAR Unmodified 857.47191 0.47191456 3687 P61026;Q53T70 RAB10 Ras-related protein Rab-10 yes no 0 0 1 6.5 0.5 1 1 30.37 30.437 3 0.0098344 5525 20230619_1887_Aki_TMTPro18x_K_F7 83.948 51.993 132310 51500 247390 227390 401800 309710 240970 368390 181400 118370 301600 372380 126160 223360 337170 56833 298270 235150 122830 48669 243720 216010 399270 308130 251010 365270 192520 140440 296970 361070 145050 225990 335400 70772 285320 221690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 69634000 10373 3687 9806 19841;19842 15914;15915 15914 2 9606 Homo sapiens 0.03747747440468174 GKGEVTQQTIQK Unmodified 1315.7096 0.70957864 2581 B4DSR7;O75177 SS18L1 Calcium-responsive transactivator yes no 0 0 1 8 0 1 39.64 39.629 3 1.6193E-05 9334 20230619_1888_Aki_TMTPro18x_K_F8 133.15 91.444 33243 19327 45103 42604 57129 63060 46044 52039 50721 37064 62152 62281 45149 40307 66452 19186 47250 37794 30774 17899 44994 41334 58062 61908 47253 53508 51777 39035 62525 61286 47606 41181 65870 20833 45329 35734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19098000 10374 2581 9807 19843 15916 15916 1 9606 Homo sapiens 0.0643522379236856 GKGGEIQPVSVK Unmodified 1197.6717 0.67173657 1453 A0A384N6A4;P61604;Q9UNM1;B8ZZL8;A0A024R3X7 HSPE1;EPFP1 10 kDa heat shock protein, mitochondrial yes no 0 0 1 4.5 3.5 1 1 42.487 42.489 3;4 1.1922E-06 11182 20230619_1880_Aki_TMTPro18x_K_F1 151.78 115.26 509980 628300 791390 681910 1257000 783240 1039200 817400 409450 616640 782790 201830 186560 90057 1105000 61389 79456 32601 475210 575020 786260 686190 1255600 786990 1040900 827630 468230 620350 757500 221250 251030 95774 1045200 63971 85613 31441 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 412430000 10375 1453 9808 19844;19845 15917;15918 15917 2 9606 Homo sapiens 0.08080757597554111 GKHDGSHEGTVYFK Unmodified 1560.7321 0.732105 1356 Q15813-2;Q15813;A0A2R8Y5Q8;A0A2R8YHI9;A0A2R8Y7E7;A0A2U3TZJ6;A0A2R8YER9;A0A2R8YFL4;A0A2R8Y809;A0A2R8Y4V6;A0A2R8Y784;A0A2R8YFM3;A0A2R8Y4P2;A0A2R8Y787;A0A2R8Y5H6;A0A2R8Y6G3;A0A2R8YF12;A0A2R8Y7H8 TBCE Tubulin-specific chaperone E yes no 0 0 1 7 0 1 36.143 36.211 4 0.00012611 7788 20230619_1887_Aki_TMTPro18x_K_F7 98.943 76.468 15019 4847.1 13430 16813 18045 11767 18347 20552 17383 20015 22429 17912 19260 14010 17488 15116 12950 11516 13823 4553.6 13856 15911 18318 12480 18459 20368 17972 20170 22604 18153 19644 14645 17551 14985 12424 10981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10951000 10376 1356 9809 19846 15919 15919 1 9606 Homo sapiens -0.025831768100260888 GKIEEDSEVLMMIK Unmodified 1620.8103 0.81028025 2730 C9IZG4;O60888-3;O60888;O60888-2 CUTA Protein CutA yes no 0 0 1 6 0 1 61.377 61.432 3 0.029409 18746 20230619_1886_Aki_TMTPro18x_K_F6 56.139 43.159 108500 70272 84006 116900 63586 95987 103610 84667 126260 120060 101500 134000 129310 116520 116340 133280 119590 158010 100010 64762 87307 113820 69031 98275 102780 88359 126380 119910 106760 134660 130530 121670 118810 135000 114660 149670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 481380000 10377 2730 9810 19847 15920 15920 1 9606 Homo sapiens 0.02470751668693083 GKIELEETIK Unmodified 1158.6496 0.64960415 1394 P56556;A0A2Y9D025;R4GN43 NDUFA6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 yes no 0 0 1 5.5 0.5 2 2 49.524 49.601 3;4 0.00019736 13563 20230619_1885_Aki_TMTPro18x_K_F5 121.68 49.027 563550 482080 527190 561660 560380 645990 583660 606790 688940 639770 729070 613650 747550 617600 542090 730830 726690 657020 520970 441980 539290 561860 580510 645940 590580 623370 697330 644230 745840 624970 752590 642950 566050 727960 693020 625080 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 774040000 10378 1394 9811 19848;19849;19850;19851 15921;15922;15923 15921 3 9606 Homo sapiens 0.07662533129132498 GKLDDYQER Unmodified 1122.5306 0.53055165 3890 Q14444-2;Q14444;E9PLA9;B4DSF8 CAPRIN1 Caprin-1 yes no 0 0 1 3.5 0.5 1 1 37.595 37.644 3 0.00088844 8607 20230619_1882_Aki_TMTPro18x_K_F3 107.55 65.206 260380 195450 228040 241280 298710 288840 273160 293560 338850 314710 340920 306140 347130 260390 265900 313290 353210 268280 240390 179380 235430 240550 303850 288680 278970 300000 341570 316680 349590 309740 350050 273000 276850 311370 336520 255600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 907830000 10379 3890 9812 19852;19853 15924 15924 1 9606 Homo sapiens -0.02581240775725746 GKLDGNQDLIR Unmodified 1227.6571 0.65714914 3600 Q53GL5;P48735;P48735-2;Q13584;B4DSZ6 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] yes no 0 0 1 7 0.816 1 1 1 42.499 42.556 3 5.7608E-06 10282 20230619_1887_Aki_TMTPro18x_K_F7 145.29 118.29 851840 689510 811250 852100 1068100 1058900 1008400 1014700 1029900 820450 967720 822710 869150 713950 1026300 790200 792640 604340 787310 632650 831480 849920 1086500 1054300 1020800 1034300 1044800 839920 990980 832080 897150 743860 1026600 783480 759350 576670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1482799999.9999998 10380 3600 9813 19854;19855;19856 15925;15926 15926 2 9606 Homo sapiens 0.052426854494115105 GKLDVQFSGLTK Unmodified 1291.7136 0.71360139 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 1 3 0 1 53.587 53.64 3 0.00023521 15740 20230619_1882_Aki_TMTPro18x_K_F3 101.43 71.621 268680 237890 256970 268770 319590 374940 333330 325260 346250 285680 298290 259420 275050 220530 346520 222130 241740 199430 248470 218010 263090 270310 327520 369900 335610 334570 349940 290150 307230 263260 284630 228900 344620 222400 232010 189810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 927120000 10381 3484 9814 19857 15927 15927 1 9606 Homo sapiens 0.07941313286073637 GKLEEQRPER Unmodified 1240.6524 0.65239812 986 A0A0P1J1R0;Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;A0A024RDY2;E9PJF7;P13693-2 TPT1 Translationally-controlled tumor protein yes no 0 0 2 5 0.816 1 1 1 30.546 30.604 4 0.0024117 5872 20230619_1885_Aki_TMTPro18x_K_F5 90.653 75.491 339830 247170 307580 329100 388140 404560 352340 384110 500260 421530 438080 401430 498110 377170 305780 442660 510770 381350 313770 227060 316420 326560 396000 402900 361910 394630 498710 423630 454440 407780 497220 393470 326320 440000 485820 363330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1668499999.9999998 10382 986 9815 19858;19859;19860 15928;15929;15930 15929 3 9606 Homo sapiens 0.04169801306647969 GKLPIVNEDDELVAIIAR Unmodified 1964.0942 0.094241321 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5;B7Z1G4;Q6QE17 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 0 1 7 0 1 62.411 62.447 3 7.5505E-24 18933 20230619_1887_Aki_TMTPro18x_K_F7 206.59 194.2 156030 132550 135110 137270 109510 127750 138500 145480 144930 162830 168550 169970 188710 162960 171390 185730 176190 203140 144150 121400 138620 138230 116640 130370 138260 147860 148310 163800 172730 172010 191130 169560 174940 187210 168720 192660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271380000 10383 1454 9816 19861 15931 15931 1 9606 Homo sapiens 0.1507579702924886 GKNPPPEFAK Unmodified 1083.5713 0.57129425 2495 B4DII5;B4DWX3;O60684;Q5TFJ7 KPNA6 Importin subunit alpha;Importin subunit alpha-7 yes no 0 0 1 4.5 3.5 1 1 41.827 41.827 3 0.010874 10213 20230619_1888_Aki_TMTPro18x_K_F8 76.655 56.326 59302 46564 60048 63173 64968 65925 66052 63090 82870 67579 80513 69507 76414 56829 68932 65777 74361 56584 54827 42771 61021 62460 67097 66397 67055 64787 83313 68146 82451 70078 77705 59532 70500 65468 70973 53907 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29849000 10384 2495 9817 19862;19863 15932;15933 15933 2 9606 Homo sapiens 0.032851453345756454 GKPEDVMPSVK Oxidation (M) 1201.6013 0.60127375 3074 H3BRL3;O14562;B3KW52 UBFD1 Ubiquitin domain-containing protein UBFD1 yes no 0 1 1 6 0 1 40.412 40.504 3 0.030574 9726 20230619_1886_Aki_TMTPro18x_K_F6 62.338 37.547 33181 19505 26165 33416 41698 35607 34911 38064 47404 38507 42921 41428 47589 42874 37671 59530 51214 55695 30574 17992 27426 32605 41859 35902 35972 38718 47394 39006 44428 42033 47986 45042 39352 59267 48901 52924 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38251000 10385 3074 9818 19864 15934 15934 1795 1 9606 Homo sapiens 0.008537162175798585 GKPESCAVTPR Unmodified 1200.5921 0.59210605 4228 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 yes yes 0 0 1 7 0 1 33.503 33.584 3 0.030319 6737 20230619_1887_Aki_TMTPro18x_K_F7 50.088 39.564 29347 17637 34444 32994 40709 42330 38759 37232 43034 35637 41667 41474 46019 40650 42147 25793 48168 37660 27131 16288 34649 32157 41702 41958 39327 38348 43528 36304 43008 41780 46656 41184 43158 26889 45956 35682 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18335000 10386 4228 9819 19865 15935 15935 1 9606 Homo sapiens -0.0001663234811530856 GKPLALVEEIR Unmodified 1223.7238 0.72377215 4063 Q5TDE9;Q9BSD7;Q5TDF0 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase yes no 0 0 1 8 0 1 53.15 53.225 3 0.018918 14944 20230619_1888_Aki_TMTPro18x_K_F8 62.162 41.537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10387 4063 9820 19866 15936 15936 1 9606 Homo sapiens 0.12085921011293976 GKPLFVR Unmodified 815.50176 0.50175812 1449 A0A384NPX8;A0A384MTZ1;P47985;P0C7P4 UQCRFS1;UQCRFS1P1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11;Putative cytochrome b-c1 complex subunit Rieske-like protein 1 yes no 0 0 1 5.5 0.5 1 1 41.96 42.05 3 0.05909 10335 20230619_1886_Aki_TMTPro18x_K_F6 63.148 47.516 630900 557620 569710 652430 863380 917100 831650 814870 974090 462890 543080 366040 473270 382270 605730 465930 681800 257350 583200 511200 588820 654480 872700 904940 844100 829930 965380 484830 573560 377650 491760 398040 616850 455820 648670 248200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 525480000 10388 1449 9821 19867;19868 15937 15937 1 9606 Homo sapiens 0.08662731176468697 GKPLPEYHVR Unmodified 1194.6509 0.65094155 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 1.5 0.5 1 1 37.362 37.392 4 0.00018151 8656 20230619_1881_Aki_TMTPro18x_K_F2 134.57 112.69 711800 597670 706560 798730 857150 846870 879670 765310 854890 784460 907180 801520 791940 650170 874870 820060 821370 714250 658250 548750 720950 790470 877950 851030 884670 788490 874080 792400 922850 808270 815570 684550 884890 815740 785660 679910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1133600000 10389 3758 9822 19869;19870 15938;15939 15939 2 9606 Homo sapiens 0.06140212008540402 GKPSEQLTPTR Unmodified 1212.6463 0.64625011 3024 H0Y613;Q14687-2;Q14687-3;Q14687 GSE1 Genetic suppressor element 1 yes no 0 0 1 7.5 0.5 1 1 35.869 35.899 3 0.04045 7828 20230619_1888_Aki_TMTPro18x_K_F8 54.023 39.158 43586 29929 34430 44723 53517 55519 45028 49162 63405 40936 53322 58042 56954 50489 60729 42595 61075 59573 40192 27537 36080 44053 53881 55163 46449 50439 63077 42383 55387 57870 58207 51918 61600 43947 58422 56409 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41072000 10390 3024 9823 19871;19872 15940 15940 1 9606 Homo sapiens 0.04843283075115323 GKSETILSPPPEK Unmodified 1381.7453 0.74529545 55 Q9P0M6;A0A024QZP6;A0A7I2V423;A0A7I2V412;Q9HA11;A0A7I2YQD6;A0A7I2YQR8;A0A7I2V6E9;A0A7I2V2N7;A0A7I2V522;A0A7I2V3Z8;A0A7I2V3M7 H2AFY2 Core histone macro-H2A.2;Core histone macro-H2A;Histone H2A yes no 0 0 1 7 0 1 45.208 45.294 3 0.010956 11452 20230619_1887_Aki_TMTPro18x_K_F7 67.93 53.054 51749 48049 54354 58799 71249 74529 75536 66312 58917 58471 71792 44899 51435 33016 72840 37480 39791 31169 47911 44060 55288 58697 72684 73990 75382 68112 61448 59084 72032 45862 54027 34738 71672 37364 38331 29702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105210000 10391 55 9824 19873 15941 15941 1 9606 Homo sapiens 0.06969261249378178 GKTEQQTADQLLAR Unmodified 1557.8111 0.8110836 558 A0A024R972;P11047 LAMC1 Laminin subunit gamma-1 yes no 0 0 1 6.5 0.5 1 1 42.667 42.751 3 1.4432E-08 10646 20230619_1886_Aki_TMTPro18x_K_F6 153.48 140.74 138720 114370 129240 140720 150430 159300 174700 165400 170060 205960 172560 143820 197050 114240 172860 178550 139280 105280 128200 104920 132480 140200 155130 159840 174560 169590 173880 203980 177820 147860 198740 122400 174370 174310 133350 100900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157810000 10392 558 9825 19874;19875 15942 15942 1 9606 Homo sapiens 0.05449050424272173 GKTPEEIR Unmodified 928.49779 0.49779495 2881 E5RJR5;E5RI56;P63208;E7ERH2;F8W8N3;P63208-2 SKP1 S-phase kinase-associated protein 1 yes no 0 0 1 4.5 0.5 1 1 33.755 33.824 3 0.082698 7093 20230619_1885_Aki_TMTPro18x_K_F5 47.938 21.34 51637 27509 70053 62264 90600 91460 76803 79457 79793 63552 88102 75565 68905 51771 92345 29479 52756 31838 47784 25501 69883 60350 91983 89938 78363 81549 81370 65455 89124 75325 71930 53028 90947 30352 50715 30292 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48952000 10393 2881 9826 19876;19877 15943 15943 1 9606 Homo sapiens 0.030685968920806772 GKVEEVELPVEK Unmodified 1354.7344 0.73439641 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3S6H7G3;A0A3Q8ATF5;Q5U8W9;A0A3Q8APW9;A0A3Q8B022;A0A3Q8APX7;A0A3S6H7Z6;A0A3Q8AIR8;B4DJ87;E9PIX6;A0A3S6H765;A0A3S6H8A6;E9PQ98;Q99873-5;E9PNR9;H0YDE4;A0A3Q8B4N0;A0A3S6H758;Q59GT2;Q9NR22-2;Q9NR22 PRMT1;HRMT1L2;PRMT8 Protein arginine N-methyltransferase 1;Protein arginine N-methyltransferase 8 yes no 0 0 1 4.5 1.12 1 1 1 1 50.007 50.069 3 9.9479E-05 13993 20230619_1883_Aki_TMTPro18x_K_F4 114.64 78.619 892380 706010 772960 885410 837810 946050 892190 909260 954640 1165800 1054000 994030 1243000 996000 858390 1347400 1125900 1098200 824070 647940 796800 880120 867010 951210 898600 938130 974440 1159000 1084200 1017500 1244000 1046000 897110 1332900 1074500 1045800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2543800000 10394 1536 9827 19878;19879;19880;19881 15944;15945;15946 15944 3 9606 Homo sapiens 0.07121858875075304 GKYDCGHVQK Unmodified 1190.5502 0.55024123 91 A0A024R0H2;O15235 MRPS12 28S ribosomal protein S12, mitochondrial yes no 0 0 1 8 0 1 34.035 34.031 4 0.00093529 7107 20230619_1888_Aki_TMTPro18x_K_F8 108.37 70.651 25078 14585 46021 38073 77615 78758 56587 56830 46916 28645 46516 36115 32563 30393 47854 10598 29217 17470 23308 13552 45432 36998 77409 76001 57982 58784 48264 30725 47102 36144 34390 30483 47151 11494 28053 16563 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16617000 10395 91 9828 19882 15947 15947 1 9606 Homo sapiens -0.03741188036610765 GLAAALLLCQNK Unmodified 1270.7067 0.70674187 3252 O43290;B4DDH9 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 0 4.5 0.5 1 1 61.943 61.97 3 5.3603E-06 18783 20230619_1885_Aki_TMTPro18x_K_F5 140.45 115.01 118730 96099 107250 109380 110450 137650 126170 133130 155730 50668 42794 35471 43013 37379 67871 43442 49874 35509 109690 88104 109990 109780 115090 136890 127160 134080 152130 55358 49247 36856 45125 38816 67443 43201 47794 33863 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61662000 10396 3252 9829 19883;19884 15948 15948 1 9606 Homo sapiens 0.08221677133860794 GLAAHYFFPR Unmodified 1177.6033 0.60326308 1129 O00203;O00203-3;A0A0S2Z5J4;A8K586;A0A8Q3WKJ9;A0A8Q3WL34;A0A8Q3SIS1;A0A8Q3SHS3;A0A8Q3WKK0;A0A8Q3SHW6;A0A8Q3SHR2;A0A8Q3SI03;A0A8Q3WKN2;A0A8Q3SHS6 AP3B1 AP-3 complex subunit beta-1;AP-3 complex subunit beta yes no 0 0 0 5.5 0.5 1 1 49.886 49.963 3 0.00023849 13768 20230619_1885_Aki_TMTPro18x_K_F5 116.37 99.346 16834 17032 20516 19018 20052 22685 22911 19526 24881 20722 18304 18796 19272 16123 27207 24166 18874 18429 15617 15600 20522 19099 20934 22593 22987 20207 24970 20832 19157 19085 20009 17138 27051 23845 18136 17566 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72194000 10397 1129 9830 19885;19886 15949 15949 1 9606 Homo sapiens 0.021565578083709624 GLAEVQQDGEAEEGATSDGEK Unmodified 2118.9189 0.91891531 3790;4031 Q5CZB5;Q02952-3;Q02952-2;Q02952 DKFZp686M0430;AKAP12 A-kinase anchor protein 12 no no 0 0 0 1 0 1 47.198 47.198 3 2.1659E-11 13261 20230619_1880_Aki_TMTPro18x_K_F1 121.63 111.97 12438 9205.6 9259.8 11349 12892 13503 12888 11550 14479 16726 15683 19355 15960 14605 17151 15175 16779 19780 11470 8449.2 9737.9 11309 13107 13449 13039 12077 14725 16703 16077 19343 16342 15254 17389 15506 16078 18727 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153620000 10398 4031;3790 9831 19887 15950 15950 1 9606 Homo sapiens -0.09578739084236076 GLAEVSK Unmodified 702.3912 0.39120462 4545 Q9HB40;B4DP22;Q9HB40-2 SCPEP1 Retinoid-inducible serine carboxypeptidase yes no 0 0 0 5 0.816 1 1 1 43.139 43.212 2 0.027787 10790 20230619_1886_Aki_TMTPro18x_K_F6 100.45 31.107 123890 74789 153760 170730 242050 243350 231310 270630 238170 151830 239330 249580 192900 214040 199970 123570 270780 247490 114600 69294 155160 165320 243820 240990 234080 271240 241860 162830 243570 247650 199090 217070 206670 132860 258230 233840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 293080000 10399 4545 9832 19888;19889;19890 15951 15951 1 9606 Homo sapiens 0.028104663975682342 GLAFIQDPDGYWIEILNPNK Unmodified 2302.1634 0.16338352 3793 X5DNM4;V9HW62;Q04760-2;Q04760 GLO1;HEL-S-74 Lactoylglutathione lyase yes no 0 0 0 8 0 1 66.157 66.176 3 5.9682E-08 20419 20230619_1888_Aki_TMTPro18x_K_F8 109.38 99.042 7204.1 6201.3 6031.3 7146.2 6950.2 7546.7 5834.9 6525 10676 5689.5 5660.7 9575.1 8398.3 7758.5 6955.7 10935 7735.2 10480 6654.6 5684.7 6243.1 7143.8 7129.4 7579.3 6095.9 6716.9 10391 5924.5 6188.6 9479 8424.3 8223.3 7164.7 10899 7412.4 9948.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7558000 10400 3793 9833 19891 15952 15952 1 9606 Homo sapiens 0.06438836258121228 GLAGHLK Unmodified 694.41261 0.41260876 2863 E1NZA1;Q92616;A0A024RBS1;B4DM32 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 1.5 0.5 1 1 37.769 37.8 3 0.0021685 8769 20230619_1881_Aki_TMTPro18x_K_F2 116.35 12.642 477830 290240 454270 476850 614040 628510 564080 562940 717360 509210 612840 545290 566120 491770 554450 405190 648620 488380 440940 267520 465920 467900 623720 622350 576230 578100 717220 519100 631180 550110 578880 504540 568270 413850 618580 463580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 838380000 10401 2863 9834 19892;19893 15953 15953 1 9606 Homo sapiens 0.05317896216934059 GLAGLGDVAEVR Unmodified 1155.6248 0.62478638 3432 Q59GM9;P11216 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 4.5 0.5 1 1 53.074 53.119 2 0.00033154 15447 20230619_1883_Aki_TMTPro18x_K_F4 134.57 93.62 112720 92999 97442 101610 99773 136280 137040 115520 128870 139090 193070 172100 161980 139900 169540 153080 176480 188680 104120 85223 100380 102390 104640 134660 135730 120130 134190 140300 193590 172200 166640 146100 172560 155670 168870 178790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 450370000 10402 3432 9835 19894;19895 15954 15954 1 9606 Homo sapiens 0.05319898046423077 GLAITFVSDENDAK Unmodified 1478.7253 0.72528829 724;3204 Q13838-2;A0A024RCM3;Q13838;A0A0G2JJZ9;B4DP52;H0Y400;O00148;B4DX78;Q69YT6 DDX39B;hCG_2005638;DDX39A;DKFZp547B159 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A no no 0 0 0 4.2 0.748 1 2 2 59.04 59.068 2;3 2.9585E-29 18023 20230619_1882_Aki_TMTPro18x_K_F3 209.67 195.32 219860 195900 228080 255060 231070 252030 264170 256870 276600 282750 298480 294530 298680 263420 279130 311380 295050 335030 203470 179780 231230 252650 240580 255200 264860 262850 282000 284700 305220 297460 303950 275290 285250 313370 282420 317810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2454900000 10403 724;3204 9836 19896;19897;19898;19899;19900 15955;15956;15957 15955 3 9606 Homo sapiens 0.00507465518785466 GLALALFGGEPK Unmodified 1171.6601 0.66010926 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 2.33 0.471 2 1 63.085 63.105 2;3 0.00045925 20011 20230619_1881_Aki_TMTPro18x_K_F2 104.79 86.722 39464 48714 35960 28603 26102 30963 48932 39562 34514 51789 37887 27451 51283 39018 52107 33905 25808 32595 36580 44403 36645 30680 28479 31400 47552 40144 36205 50915 39263 29357 51878 39647 51421 34150 24994 30948 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98197000 10404 2702 9837 19901;19902;19903 15958;15959 15958 2 9606 Homo sapiens 0.08114560574222196 GLALSNSDVIR Unmodified 1143.6248 0.62478638 2291 Q5LJB0;B2RB07;Q9Y5K5-2;Q9Y5K5-4;Q9Y5K5-3;Q9Y5K5;Q5LJA5;Q5LJA9;H0Y6Y4;B4DW59;B7Z9U9 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes no 0 0 0 6.5 0.5 1 1 48.395 48.478 2 1.0009E-07 13247 20230619_1886_Aki_TMTPro18x_K_F6 195.58 152.58 173930 150570 160320 165520 190980 215290 207520 183550 205890 186560 202720 186300 174900 153630 222480 191280 201190 192100 160780 137960 164510 166620 196400 213230 208160 189820 209640 188420 206940 188100 181660 161530 224050 191770 192640 182480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 445450000 10405 2291 9838 19904;19905 15960;15961 15961 2 9606 Homo sapiens 0.058718980464163906 GLAPEQPVTLR Unmodified 1179.6612 0.66117189 805 E9KL42;A0A087WT95;Q86TX2;P49753;G3V4F2;B7ZMC1;B4DV16;A1L172;Q3I5F7 ACOT2;ACOT1;ACOT6 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial;Putative acyl-coenzyme A thioesterase 6 yes no 0 0 0 6 0.816 1 1 1 46.347 46.429 2 2.4816E-06 12307 20230619_1886_Aki_TMTPro18x_K_F6 164.43 101.58 262980 214930 226260 263110 292830 315150 323580 310720 354430 324590 354260 336620 371120 308360 334520 391970 399170 385410 242890 197180 234170 262420 299730 314640 325310 318090 359250 327730 364100 340450 376510 323460 344690 392010 381210 366180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 293330000 10406 805 9839 19906;19907;19908 15962;15963 15962 2 9606 Homo sapiens 0.07852774943125951 GLAPEVADR Unmodified 926.48214 0.48214489 1641;1343 P12081;P12081-4;E7ETE2;A0A6Q8PHA5;A0A6Q8PFF2;Q52NV4;P12081-2;P12081-3;A0A6Q8PF47;A0A6Q8PHE3;B4DDD8;B3KWE1;B4E1C5;A0A6Q8PF07;B4DEA2;B4DDN8;D6RB22;B4DQ67;A0A2R8Y6I1;A0A2R8Y3N3;B2R7G6;A0A2R8Y5P7;P49590-2;P49590;D6RJE6;B4DSY5 HARS;HRS;HARS2 Histidine--tRNA ligase, cytoplasmic;Probable histidine--tRNA ligase, mitochondrial no no 0 0 0 2.5 0.5 1 1 39.937 40 2 0.0015244 9622 20230619_1882_Aki_TMTPro18x_K_F3 114.99 70.871 107030 77780 94784 97289 107030 124560 122260 118160 145980 111270 134240 146390 139590 117540 120900 138320 158140 149080 98805 71405 97525 97012 110720 123710 123090 120980 146770 113950 138580 146050 141440 123290 125410 139220 150880 141520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 488070000 10407 1641;1343 9840 19909;19910 15964 15964 1 9606 Homo sapiens 0.01596310375032317 GLAPNTPGK Unmodified 853.46577 0.46576654 708 A0A024RC67;O43663-3;O43663-2;O43663-4;O43663;H0YL53;G3V3N7 PRC1 Protein regulator of cytokinesis 1 yes no 0 0 0 8 0 1 40.709 40.701 2 0.00012283 9766 20230619_1888_Aki_TMTPro18x_K_F8 125.31 60.747 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10408 708 9841 19911 15965 15965 1 9606 Homo sapiens 0.03317229208948902 GLATFCLDK Unmodified 1023.5059 0.5059168 3209;3235 Q6IB11;O00264;O15173;O15173-2;U3KQM0 PGRMC1;PGRMC2 Membrane-associated progesterone receptor component 1;Membrane-associated progesterone receptor component 2 no no 0 0 0 4.5 3.5 1 1 56.943 56.971 2;3 0.00031582 16559 20230619_1888_Aki_TMTPro18x_K_F8 155.07 96.874 513260 463920 441410 456960 416410 525990 504660 465360 538980 297150 297750 275390 260540 234900 443770 299980 336030 297660 474360 424620 454190 463240 437560 525320 504600 475300 536680 309130 315510 279450 275940 247050 441270 300740 322280 282890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 287130000 10409 3209;3235 9842 19912;19913 15966;15967 15967 2 9606 Homo sapiens -0.004895921827937855 GLAYVEYENESQASQAVMK Oxidation (M) 2131.9732 0.97319949 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DYA2;H0YHU8 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 1 0 4 0 1 54.636 54.651 3 0.0045699 16084 20230619_1883_Aki_TMTPro18x_K_F4 64.454 54.496 27388 21579 23844 26701 28169 26804 29129 24772 28233 29901 29585 30333 30438 27213 30407 30886 28811 30081 25292 19801 24594 26543 28909 27066 29279 25603 28885 29957 30342 30661 31041 28361 30835 30937 27590 28575 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46691000 10410 1555 9843 19914 15968 15968 1018 1 9606 Homo sapiens -0.04750818466391138 GLCAIAQAESLR Unmodified 1287.6605 0.66051996 3494 P23396;P23396-2;Q53G83;Q9NQS8;H0YCJ7;A7E2S3;F2Z2S8;H0YF32 RPS3 40S ribosomal protein S3 yes no 0 0 0 7 0.816 2 2 2 53.335 53.408 2;3 6.543E-05 15047 20230619_1887_Aki_TMTPro18x_K_F7 146.17 96.726 526500 417650 517980 558460 502270 556920 557290 549300 576040 579080 513080 499020 584490 478080 504910 694000 578570 522860 486680 383550 526890 552320 524390 563040 559410 562560 583640 581200 532450 509880 590480 505150 519930 683810 552470 498630 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 8083199999.999999 10411 3494 9844 19915;19916;19917;19918;19919;19920 15969;15970;15971 15970 3 9606 Homo sapiens 0.02819612231769497 GLCGMGGPR Unmodified 903.40549 0.40549125 3364 V9HW53;O95865;H0Y7N1;A0A140T971;Q5SSV3;Q5SRR8 HEL-S-277;DDAH2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes no 0 0 0 1 0 1 38.856 38.856 2 0.0034394 9595 20230619_1880_Aki_TMTPro18x_K_F1 97.075 81.413 77460 59271 70462 77557 93841 104810 89677 94760 109550 84072 102140 107680 105840 89265 85443 94017 124030 105010 71543 54427 72561 77157 95566 103660 91268 97190 110090 86304 105320 107610 106970 92938 89407 95004 118170 99689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72188000 10412 3364 9845 19921 15972 15972 1 9606 Homo sapiens -0.05007527717418725 GLCGMGGPR Oxidation (M) 919.40041 0.40040587 3364 V9HW53;O95865;H0Y7N1;A0A140T971;Q5SSV3;Q5SRR8 HEL-S-277;DDAH2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes no 0 1 0 7 0.816 1 1 1 32.009 32.052 2 0.0073077 6089 20230619_1887_Aki_TMTPro18x_K_F7 85.89 73.337 48788 36315 42649 46924 70124 69055 60365 57165 72726 48346 63088 58906 49210 46791 61755 47042 67782 56278 45041 33346 44269 46787 70368 67886 61775 58982 72909 49708 64568 58924 51307 48662 62821 47840 64716 53397 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 74070000 10413 3364 9845 19922;19923;19924 15973;15974 15974 1967 2 9606 Homo sapiens -0.06251831580027556 GLCTDYRPSLEGR Unmodified 1522.7198 0.71982575 848 B7Z879;Q658K0;Q53FX3;A0A087WXL6;Q9H270;B3KPS8;A0A0G2JS92 VPS11;DKFZp564P2364 Vacuolar protein sorting-associated protein 11 homolog yes no 0 0 1 7 0 1 42.964 43.043 3 0.0008126 10535 20230619_1887_Aki_TMTPro18x_K_F7 90.689 71.478 61482 52011 58136 61649 60929 71033 66817 75559 85209 75370 77851 72127 79742 63039 68338 76199 71473 67998 56837 47694 59405 61607 63289 71212 67616 76830 85449 76090 80249 73086 80749 66035 69908 75890 68330 64684 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95951000 10414 848 9846 19925 15975 15975 1 9606 Homo sapiens -0.020625365447131117 GLDDDRGPR Unmodified 999.47337 0.47337112 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 1.5 0.5 1 1 29.168 29.204 3 1.2662E-05 5692 20230619_1880_Aki_TMTPro18x_K_F1 147.4 122.94 124470 80179 110890 128890 142490 145100 144030 145240 182310 157380 182580 166920 182550 153410 145530 124190 206270 167710 114840 73860 114350 126290 145540 145460 146290 148680 183480 158760 187150 168510 184590 157230 151840 127800 196500 158970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204300000 10415 3152 9847 19926;19927 15976;15977 15976 2 9606 Homo sapiens -0.02638663261416241 GLDDDRGPWR Unmodified 1185.5527 0.55268407 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 3.5 0.5 1 1 40.351 40.4 3 0.001848 9833 20230619_1882_Aki_TMTPro18x_K_F3 87.895 64.044 39477 29260 35014 36596 33771 46945 46422 47183 52174 50626 54738 50602 53533 41992 44442 55147 48452 60916 36448 26859 35952 36495 35605 46659 46248 48258 52911 50975 55948 51104 54215 44326 45639 55491 46406 57752 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132190000 10416 3152 9848 19928;19929 15978 15978 1 9606 Homo sapiens -0.0326701630729076 GLDFALLQK Unmodified 1003.5702 0.57023162 2227 Q9H4P6;E7EQZ7;Q9UK43;Q95HA6;B2R5Y4;Q13123;Q9Y3Z5;D6REL4 IK;CSA2;DKFZp564B112 Protein Red yes no 0 0 0 1 0 1 62.086 62.086 2 0.066255 19346 20230619_1880_Aki_TMTPro18x_K_F1 64.567 38.83 25024 20020 24308 26821 27147 32947 26136 27999 32191 30139 31831 33770 33040 28381 33436 26327 31340 36330 23131 18385 24813 26597 27981 32724 26607 28998 32440 30462 32747 33911 33697 29359 33838 27074 30041 34382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21506000 10417 2227 9849 19930 15979 15979 1 9606 Homo sapiens 0.06858930965654508 GLDFLHANCIVHR Unmodified 1550.7776 0.7776154 660 F8VYH9;F8VTV8;F8VWX7;A0A024RBB6;P11802;F8VXD2;F8VZZ0;F8VZ51;Q6LC83;P11802-2 CDK4 Cyclin-dependent kinase 4 yes no 0 0 0 2 0 1 49.05 49.115 4 4.4866E-08 14042 20230619_1881_Aki_TMTPro18x_K_F2 162.49 142.91 26637 19990 27540 35938 26772 32031 32525 39373 42227 28630 27488 31991 32198 27988 31891 39223 34104 40855 24625 18431 27946 34903 28054 32818 32766 39420 41844 29624 29140 32206 32714 29595 32600 39299 32656 38762 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125220000 10418 660 9850 19931 15980 15980 1 9606 Homo sapiens 0.024257701713395363 GLDFSDR Unmodified 808.37153 0.37153181 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4H4;A0A7I2V4Y9;B3KTX4;F8W1I6;A0A7I2V390;F8VW18;F8VRV7;H0YHL1;A0A7I2V2Z2 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 0 0 2.5 0.5 1 1 43.966 44.042 2 0.014627 11711 20230619_1881_Aki_TMTPro18x_K_F2 112.37 64.255 248930 218750 255120 231480 401560 451580 362030 320550 517440 268720 368220 377720 285670 280250 309840 308620 379440 404640 230330 200360 260770 235630 404770 436920 371730 335110 511380 278300 381250 375250 295740 293690 318480 315060 362550 383220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 370890000 10419 1406 9851 19932;19933 15981 15981 1 9606 Homo sapiens -0.04031909613195239 GLDHDFGPSR Unmodified 1099.5047 0.50467125 184 Q9UDY2-7;Q9UDY2;A0A1B0GTW1;Q9UDY2-3;A0A3B3ITE1;A0A024R233;A0A2R8YDH4;A0A3B3IRI3;B7Z954;Q9UDY2-6;A0A3B3ISZ5;A0A024R225;B7Z2R3;A0A3B3IU51;A0A3B3ISF1;A0A3B3IRV6;Q9UDY2-2;Q9UDY2-4;Q9UDY2-5 TJP2 Tight junction protein ZO-2 yes no 0 0 0 3 0 1 37.367 37.42 3 3.4129E-07 8539 20230619_1882_Aki_TMTPro18x_K_F3 144.77 118.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10420 184 9852 19934 15982 15982 1 9606 Homo sapiens -0.04110090227322871 GLDISNVK Unmodified 844.46543 0.46543219 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;Q5S4N1;A0A0J9YVQ7;A0A087WVZ1 DDX3X ATP-dependent RNA helicase DDX3X yes no 0 0 0 6.5 0.5 1 1 49.261 49.342 2 0.020218 13633 20230619_1886_Aki_TMTPro18x_K_F6 88.819 44.424 338490 244790 286230 350350 377250 398790 367910 404530 530050 431750 471590 464800 545610 461360 383440 576360 601820 542590 312360 225060 296850 345610 384690 399630 376440 413460 528260 436160 489530 470590 547050 482050 405850 574870 573290 515930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1470599999.9999998 10421 1018 9853 19935;19936 15983 15983 1 9606 Homo sapiens 0.03697809489096926 GLDNTEFQGK Unmodified 1107.5197 0.51965261 2142;4410 A8K9U0;Q9BWF3;E9PB51;Q9BWF3-4;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B no no 0 0 0 4.67 0.471 1 2 46.531 46.591 2 2.0948E-09 12394 20230619_1883_Aki_TMTPro18x_K_F4 201.18 126.69 205860 148360 176290 197140 231530 244850 215650 217820 288070 241730 267940 250030 286750 227140 217050 294080 274360 235250 189990 136290 182480 195640 235810 243350 220550 224990 288460 243420 276440 252850 288690 238570 225520 290950 261690 224210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129410000 10422 2142;4410 9854 19937;19938;19939 15984;15985 15984 2 9606 Homo sapiens -0.02980643149999196 GLDPSTPAQVIAPSETPSSSSVVK Unmodified 2353.2013 0.20128517 3898 Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7;A0A0A0MS66;Q14693-6 LPIN1 Phosphatidate phosphatase LPIN1 yes no 0 0 0 6 0 1 55.658 55.734 3 2.0473E-08 16327 20230619_1886_Aki_TMTPro18x_K_F6 99.957 90.861 15222 14813 14644 18173 16389 16018 18042 15001 19299 19562 19241 21291 24052 18367 21654 25697 25684 25699 14088 13582 14971 18044 16912 16348 18127 15535 19599 19580 19971 21439 24272 19439 22306 25691 24536 24409 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13991000 10423 3898 9855 19940 15986 15986 1 9606 Homo sapiens 0.07881257662347707 GLDPVEILQER Unmodified 1267.6772 0.67721588 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A994J4Z2;Q59FZ6;A0A2R8YGP5;A5D6X0 SMARCA4 Transcription activator BRG1 yes no 0 0 0 3.5 0.5 1 1 60.242 60.258 2 1.5262E-11 18505 20230619_1882_Aki_TMTPro18x_K_F3 175.65 137.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10424 1348 9856 19941;19942 15987;15988 15987 2 9606 Homo sapiens 0.05408436389348026 GLDPYNVLAPK Unmodified 1185.6394 0.63937381 1471;4101 P10606;A0A384NL93;Q6FHM4;Q6FHJ9 COX5B Cytochrome c oxidase subunit 5B, mitochondrial no no 0 0 0 4.5 3.5 1 1 58.67 58.694 2;3 0.00021418 17944 20230619_1880_Aki_TMTPro18x_K_F1 149.72 97.037 144800 136430 172890 190300 199810 238170 240370 240670 266820 168730 188750 200040 222290 199960 186340 202600 220960 247780 134240 125270 173880 188330 206540 237120 240720 243740 266880 175520 198880 201730 224240 206420 192120 206040 211270 234770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 739860000 10425 1471;4101 9857 19943;19944 15989;15990 15989 2 9606 Homo sapiens 0.05397970194530899 GLDVEDVK Unmodified 873.44436 0.4443624 1328;3137 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4 DDX17;DDX5 Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 no no 0 0 0 2.8 0.748 2 2 1 48.976 49.041 2;3 0.00058192 13960 20230619_1881_Aki_TMTPro18x_K_F2 160.75 114.38 924240 731060 725660 792330 1030300 1013300 902650 890060 1112200 981080 1098700 1001200 1104600 924010 887310 1149400 1253400 980610 852920 670000 758460 798200 1042600 1005700 923850 920100 1120400 987720 1127200 1013600 1117100 967390 927640 1141300 1193800 934180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2885500000 10426 1328;3137 9858 19945;19946;19947;19948;19949 15991;15992 15991 2 9606 Homo sapiens 0.002577993895670261 GLDYEGGGCR Unmodified 1082.4451 0.44510746 3283 O60568;B3KQQ3;Q9UG85;H7C2S8 PLOD3;DKFZp564O1822 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes no 0 0 0 2 0 1 37.721 37.784 2 2.816E-09 8811 20230619_1881_Aki_TMTPro18x_K_F2 195.17 158.99 94783 68211 85858 77654 93147 101320 105070 101980 117160 110830 113150 120360 132770 97478 107120 133730 142850 125730 87509 62565 88028 78009 96508 100690 105610 104350 118530 111820 117180 120990 133600 103280 111480 133280 136210 119570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112420000 10427 3283 9859 19950 15993 15993 1 9606 Homo sapiens -0.09281729233020997 GLEAAQIK Unmodified 828.47052 0.47051757 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 6.5 0.5 1 1 45.533 45.619 2 0.0087548 11902 20230619_1886_Aki_TMTPro18x_K_F6 103.74 41.157 151630 117130 133480 143410 178100 204620 180640 173960 243960 146350 162300 144850 146000 124520 177450 130200 163950 135930 140020 107480 137870 143450 181740 201520 183810 179060 241350 149570 169590 146480 151040 129430 178870 131250 156800 129150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140990000 10428 349;3906 9860 19951;19952 15994;15995 15994 2 9606 Homo sapiens 0.04942113351705757 GLEALLADPQQK Unmodified 1281.6929 0.69286595 4534 Q9H8H0;J3QLQ6;J3QR28;Q9H8H0-2 NOL11 Nucleolar protein 11 yes no 0 0 0 6.5 0.5 1 1 60.232 60.284 3 6.5373E-07 18235 20230619_1886_Aki_TMTPro18x_K_F6 129.82 91.581 89702 71823 85817 90067 77215 86241 83497 88742 92038 99436 93861 94029 119030 89302 101830 123290 89086 109750 82904 65912 87386 89420 81075 87560 84147 90770 93442 99738 97322 95595 119760 94114 103270 122520 85503 104310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 320250000 10429 4534 9861 19953;19954 15996;15997 15996 2 9606 Homo sapiens 0.06328722906391704 GLEDPSQVVR Unmodified 1098.5669 0.56693715 2382 Q8TEX9-2;Q8TEX9;B3KQ33;Q59FI4;B3KPS9;B3KT38;B3KTB3;D3DS63;H0YN14;Q59H62;B3KSQ4;Q6I9Y8;B3KPY9 IPO4 Importin-4 yes no 0 0 0 3 0 1 44.046 44.116 2 0.00026266 11452 20230619_1882_Aki_TMTPro18x_K_F3 134.66 101.77 130440 106290 121060 135330 135390 143130 141640 136300 163780 175930 170780 146090 177380 137400 145260 195720 181880 168700 120540 97551 124050 134360 139660 144010 143130 140770 165980 174770 174970 149500 179240 145160 150580 194070 173580 160570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160240000 10430 2382 9862 19955 15998 15998 1 9606 Homo sapiens 0.02159636120995856 GLEDSYEGR Unmodified 1024.4462 0.44615331 4258 Q8NHP8-2;Q8NHP8 PLBD2 Putative phospholipase B-like 2;Putative phospholipase B-like 2 32 kDa form;Putative phospholipase B-like 2 45 kDa form yes no 0 0 0 1 0 1 38.432 38.432 2 0.0025813 9402 20230619_1880_Aki_TMTPro18x_K_F1 105.1 34.245 36549 23986 36531 40249 39967 44846 44243 49632 54876 43720 48806 54640 50734 42346 36574 36248 61692 54938 33754 22106 37190 39352 41375 45077 44697 50199 55022 44838 50463 54509 51067 43792 38816 37576 58737 52007 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31488000 10431 4258 9863 19956 15999 15999 1 9606 Homo sapiens -0.06509191592465413 GLEEFFDDPK Unmodified 1195.5397 0.53971935 4553 Q9HD33;Q9HD33-2 MRPL47 39S ribosomal protein L47, mitochondrial yes no 0 0 0 2 0.707 1 2 1 61.849 61.862 3 0.00012467 19193 20230619_1882_Aki_TMTPro18x_K_F3 125.48 99.541 49666 58692 62353 72000 59065 69032 63250 72760 79112 73741 74801 69698 79195 65887 64447 80408 78689 85116 46149 53783 62297 71578 61740 70111 64063 74084 79526 74355 77087 70847 79990 68883 66670 80782 75196 80770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127400000 10432 4553 9864 19957;19958;19959;19960 16000;16001 16001 2 9606 Homo sapiens -0.05022892210035934 GLEEGQAQAGQCPSLEGR Unmodified 1885.8588 0.85883843 4756 Q9Y6C2;A0A0A0MT20;Q9Y6C2-2 EMILIN1 EMILIN-1 yes no 0 0 0 2.5 0.5 1 1 42.613 42.686 3 2.8688E-14 11067 20230619_1881_Aki_TMTPro18x_K_F2 150.8 136.55 108320 74802 93017 89151 117580 112690 107020 100970 118490 113920 135340 138010 113300 116760 119640 123520 139780 116430 99944 68653 96081 89186 119820 111960 108890 104320 120710 115190 137130 138280 116790 121360 122670 123640 133380 110740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185030000 10433 4756 9865 19961;19962 16002 16002 1 9606 Homo sapiens -0.048656634378403396 GLEEPEMDPK Unmodified 1143.5118 0.51179004 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 1 0 1 47.666 47.666 2 0.010244 13422 20230619_1880_Aki_TMTPro18x_K_F1 78.149 44.071 47139 37666 47923 48567 49758 60213 59833 58293 69848 62590 66638 72015 73050 62235 59180 73717 76902 77830 43588 34576 48664 48306 51855 59938 60044 59795 70443 63327 68826 72345 73713 65126 61480 74082 73414 73876 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35341000 10434 3957 9866 19963 16003 16003 1 9606 Homo sapiens -0.054225384617893724 GLEEPEMDPK Oxidation (M) 1159.5067 0.50670466 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 1 0 1.5 0.5 1 1 42.183 42.223 2 0.0031058 10841 20230619_1881_Aki_TMTPro18x_K_F2 92.439 82.435 21946 16132 21761 24471 30046 28727 28068 30725 32528 24789 34544 34550 32855 26812 28709 35438 37403 37410 20279 14841 22259 24074 30468 28769 28557 31085 32929 25671 35268 34397 33389 28368 29783 35561 35703 35511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65112000 10435 3957 9866 19964;19965 16004 16004 2625 1 9606 Homo sapiens -0.06666842324398203 GLEETVSR Unmodified 889.45051 0.45051041 1036 O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;Q57Z91;O60282-2;A0A7I2V352;A0A7I2YQQ7;Q59GB8 KIF5C Kinesin heavy chain isoform 5C;Kinesin-like protein yes no 0 0 0 2 0 1 37.105 37.166 2 0.0015081 8581 20230619_1881_Aki_TMTPro18x_K_F2 141.52 59.734 58208 42291 53508 66171 66984 62357 70338 66593 88644 72454 69757 72136 80521 66588 59899 70815 87832 81699 53750 38924 55017 64773 68543 63447 71252 67918 88497 72937 72922 73034 80883 69128 62867 71674 83724 77506 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137530000 10436 1036 9867 19966 16005 16005 1 9606 Homo sapiens 0.0013631762110435375 GLEGERPAR Unmodified 983.51484 0.514842 3594;1322 A0A1W2PQS6;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A2R8Y6L3;S4R435;Q14489;P46783;Q59GE4 RPS10;RPS10-NUDT3 40S ribosomal protein S10 no no 0 0 1 3.83 1.34 1 2 1 1 1 27.063 27.151 3 0.00027283 4524 20230619_1882_Aki_TMTPro18x_K_F3 126.07 78.493 654770 440970 631080 701310 783790 812160 710310 730480 959200 816240 946090 901290 887160 764620 745020 689780 1041500 892450 604600 406080 645660 687830 800150 810780 728190 754160 962080 823300 968120 906150 900880 789540 776030 706020 992560 846050 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1287200000 10437 1322;3594 9868 19967;19968;19969;19970;19971;19972 16006;16007;16008;16009;16010;16011 16008 6 9606 Homo sapiens 0.022425174978934592 GLEGWEK Unmodified 817.39702 0.39701828 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 0 0 4.5 0.5 1 1 50.13 50.185 2 0.018139 14075 20230619_1883_Aki_TMTPro18x_K_F4 112.17 37.836 401750 315970 352550 362840 347850 464810 428250 416560 457980 527100 499330 493910 568960 439570 464490 530230 565900 499530 371020 289740 362350 363980 364580 461020 428080 431730 466970 525680 513310 500990 573260 460220 480080 529510 540010 475030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 390700000 10438 351 9869 19973;19974 16012 16012 1 9606 Homo sapiens -0.01898435090777184 GLEHEEAR Unmodified 939.44101 0.44100836 723 Q59HG5;A0A024RCK7;Q15776 ZNF192;ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 yes no 0 0 0 1 0 1 26.288 26.288 3 0.00055113 4616 20230619_1880_Aki_TMTPro18x_K_F1 134.48 72.8 7035.3 2620 8694.2 7996.1 12712 13150 9505 12913 8994.5 6096.8 12070 14560 11382 11643 13069 4117.6 11523 13400 6495.9 2450.1 8748.4 7692 12785 12888 9767.3 13015 9299.6 6783.1 12232 14283 11726 11707 13124 4810.1 11053 12622 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2604100 10439 723 9870 19975 16013 16013 1 9606 Homo sapiens -0.031134506644320936 GLEISGTFTHR Unmodified 1216.62 0.62003536 1172 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087X253;B4DWG4;B4E261;Q96EL6;B4DIL5 AP2B1;DKFZp781K0743 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 7.5 0.5 1 1 44.282 44.332 3 1.2369E-09 11205 20230619_1888_Aki_TMTPro18x_K_F8 189.57 156.34 107160 69879 90082 94438 88674 93579 98079 95909 126120 103200 110640 98146 112020 85419 90564 118910 96752 117780 98832 64235 92923 93341 92526 94747 99210 98031 126210 103800 114190 99522 113200 90359 92980 118800 92657 111800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142470000 10440 1172 9871 19976;19977 16014;16015 16015 2 9606 Homo sapiens 0.020390139036408073 GLELIASENFCSR Unmodified 1494.7137 0.71367774 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;G3V5L0;G3V4W5;G3V540;G3V2E4;G3V2W0;G3V4X0;G3V4T0;G3V3Y8;G3V241 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 6.5 0.5 1 1 58.804 58.861 3 7.5339E-16 17626 20230619_1886_Aki_TMTPro18x_K_F6 208.87 186.15 68360 49321 55114 58939 55488 70013 65210 66856 69172 54192 50070 55363 54245 46048 67215 60179 56271 61604 63062 45259 57129 58884 57967 69859 65305 68172 69454 55500 52534 55839 55847 48558 67480 60349 53982 58477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176910000 10441 657 9872 19978;19979 16016 16016 1 9606 Homo sapiens -0.013890547762457572 GLENPLPERPR Unmodified 1276.6888 0.68878362 2255 D3DWF3;B4E083;Q59GD0;B2R841;P53350 PLK1 Serine/threonine-protein kinase PLK;Serine/threonine-protein kinase PLK1 yes no 0 0 1 6 0 1 39.8 39.888 3 0.00063361 9484 20230619_1886_Aki_TMTPro18x_K_F6 74.392 45.475 62588 49868 59220 61150 68479 82566 88831 81632 105720 72682 70822 63767 79406 62947 59618 77658 74287 68644 57838 45754 60622 61117 71016 81814 88829 83205 105250 73739 74612 65164 79827 65756 61878 77249 70896 65315 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44148000 10442 2255 9873 19980 16017 16017 1 9606 Homo sapiens 0.06150678203357529 GLEPPEEEK Unmodified 1026.487 0.4869555 4759 Q9Y6K1;Q59HC6;A0A0C4DG02;F8WE91;Q9Y6K1-2 DNMT3A DNA (cytosine-5)-methyltransferase 3A yes no 0 0 0 1 0 1 43.769 43.769 2 0.003641 11761 20230619_1880_Aki_TMTPro18x_K_F1 96.668 57.892 23310 17105 19164 25893 25146 30545 23796 30572 37006 33426 35788 41763 40369 37208 21665 45498 174090 50023 21508 15736 19945 25468 25669 30514 24488 31286 36901 33889 36981 41863 40406 38958 30832 45765 164230 47919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10594000 10443 4759 9874 19981 16018 16018 1 9606 Homo sapiens -0.025228502728623425 GLESATSL Unmodified 776.3916 0.39159855 3316 Q6UQL6;O75792;Q6IBG3 RNASEH2A;JUNB Ribonuclease;Ribonuclease H2 subunit A yes no 0 0 0 2.5 0.5 1 1 51.726 51.778 2 0.040944 15215 20230619_1881_Aki_TMTPro18x_K_F2 74.335 61.127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10444 3316 9875 19982;19983 16019;16020 16019 2 9606 Homo sapiens -0.005541586732192627 GLESLPPLRPQQNPVLPVAGER Unmodified 2366.307 0.30702806 2037 A8K492;P56192;B4DF61;B4E0E9;P56192-2;A0A024RBA2 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 0 1 2 0 1 56.325 56.343 3 1.8412E-56 17101 20230619_1881_Aki_TMTPro18x_K_F2 288.82 264.81 242630 205480 238520 248800 193800 239970 261900 254710 266970 303100 299450 325300 327710 272310 322780 340830 309210 359040 224370 188460 242080 247650 206830 243630 260370 260550 273160 304280 307200 327370 333240 286320 327680 342370 296330 340650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 163670000 10445 2037 9876 19984 16021;16022 16022 2 9606 Homo sapiens 0.1785268308913146 GLEVINDYHFR Unmodified 1361.6728 0.67279921 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;X6RHM1;H3BM18;Q6K0P9-2;Q6K0P9;Q6K0P9-3;Q6K0P9-4;X6RHR0;Q6K0P9-5;H3BVE6;Q6K0P9-6 IFI16;PYHIN1 Gamma-interferon-inducible protein 16;Pyrin and HIN domain-containing protein 1 yes no 0 0 0 6 0 1 51.585 51.662 3 2.1165999999999998E-23 14581 20230619_1886_Aki_TMTPro18x_K_F6 211.37 189.82 113000 103620 111730 142650 235750 261150 225950 218160 279070 168910 129560 126270 169290 147780 146970 163050 147450 127630 104550 95140 115740 142270 234860 254000 229700 224370 275160 172360 141690 130900 170560 152510 149950 161610 140940 121670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 447730000 10446 2829 9877 19985 16023 16023 1 9606 Homo sapiens 0.006429719664311051 GLEVTAYSPLGSSDR Unmodified 1550.7577 0.75765105 3450 V9HWI0;P14550 HEL-S-165mP;AKR1A1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 6 0 1 54.271 54.348 2 3.8897E-28 15744 20230619_1886_Aki_TMTPro18x_K_F6 286.85 234.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10447 3450 9878 19986 16024 16024 1 9606 Homo sapiens 0.004302529217511619 GLEVTDDSPK Unmodified 1059.5084 0.50841922 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 3 0 1 45.1 45.175 2 0.00019339 11922 20230619_1882_Aki_TMTPro18x_K_F3 158.76 114.31 66141 52816 71298 76484 71975 80907 73545 71087 100800 100520 118880 141140 110520 106720 109270 114720 139350 146730 61189 48547 72038 75319 74794 81236 74928 74130 101840 101250 120900 140160 113120 111600 112830 116930 133090 139000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68486000 10448 1637 9879 19987 16025 16025 1 9606 Homo sapiens -0.01895465244137995 GLEYLHFMR Unmodified 1164.575 0.57499942 825 Q15452;A0A8V8TLK1;A0PJ51;A0A087WVN8;A0A384MR07;Q59FZ4;Q13043-2;Q13043;Q13188;Q13188-2 STK4;STK3 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit;Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes no 0 0 0 2 0 1 53.271 53.304 3 2.8178E-06 15882 20230619_1881_Aki_TMTPro18x_K_F2 149.82 124.96 22232 17420 20422 23777 25752 31751 25708 24991 29737 20496 17364 16680 19062 15326 25031 17298 18383 16768 20538 16002 21002 23578 26361 31330 26034 25876 29559 20863 18486 17060 19678 15966 24937 17349 17642 15937 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14912000 10449 825 9880 19988 16026 16026 1 9606 Homo sapiens -0.000705081632531801 GLFATQLIR Unmodified 1017.5971 0.59711507 2618 B4DX46;Q6GMV2;C9IYN9;E2QRN5;F8WEJ9 SMYD5 SET and MYND domain-containing protein 5 yes no 0 0 0 5 0 1 57.452 57.51 2 0.0018323 16905 20230619_1885_Aki_TMTPro18x_K_F5 122.18 86.052 62271 49585 59591 66783 65207 81170 73014 66989 90433 37008 28827 27314 32221 32025 50629 37424 44512 37531 57550 45540 60903 66187 67598 80616 73638 68638 88531 38842 32663 28366 33718 33158 50743 37570 42599 35671 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17842000 10450 2618 9881 19989 16027 16027 1 9606 Homo sapiens 0.08902039576832976 GLFDDEDEESDLFTEASQDR Unmodified 2316.9506 0.95060937 2080 Q9Y4E1;J3KP36;Q9Y4E1-4;Q9Y4E1-1;Q9Y4E1-2;Q9Y4E1-6;Q9Y4E1-3;Q9Y4E1-5;A8K5W5 FAM21C WASH complex subunit FAM21C yes no 0 0 0 1 0 1 62.614 62.614 3 5.4527E-08 19570 20230619_1880_Aki_TMTPro18x_K_F1 110.41 101.91 6044.3 5119.3 5008.5 6599.3 5278.5 6063.3 6250.2 6573.5 7277.7 6208.2 6571.6 6046.9 5874.6 5607.3 7357.1 7065 8076.9 9875.6 5582.3 4698.3 5188.2 6534.1 5493 6182.5 6277.3 6671.2 7323.4 6290.2 6745.2 6135.8 6094.4 5878.9 7493.8 7232.5 7733.4 9343.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10970000 10451 2080 9882 19990 16028 16028 1 9606 Homo sapiens -0.15518791120939568 GLFDEYGSK Unmodified 1014.4658 0.46582612 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;A0A7P0TBC2;Q58FF3;Q58FF2 HSP90B1;HEL-S-125m;TRA1;HSP90B2P;GRP94c Endoplasmin;Putative endoplasmin-like protein yes no 0 0 0 5.67 0.471 1 2 53.276 53.351 2;3 8.1627E-05 15318 20230619_1886_Aki_TMTPro18x_K_F6 158.61 120.89 1373500 1087200 1153400 1314900 1304800 1551400 1522500 1506100 1667900 1740500 1819600 1994500 1902600 1664900 1843800 2082900 1935700 2284200 1268100 997410 1193500 1312200 1350600 1549600 1526800 1548000 1697500 1753900 1864800 2001800 1936600 1750400 1882500 2096900 1853600 2166100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2092999999.9999998 10452 3452 9883 19991;19992;19993 16029;16030;16031 16030 3 9606 Homo sapiens -0.0408281558170529 GLFEEAAK Unmodified 863.43888 0.43888309 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2;H3BVE2 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 3 0 1 50.539 50.611 2 0.013845 14393 20230619_1882_Aki_TMTPro18x_K_F3 87.181 49.048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10453 4222 9884 19994 16032 16032 1 9606 Homo sapiens 0.001701205977610698 GLFEVNPWK Unmodified 1088.5655 0.56548059 4555 Q9HDC9;Q9HDC9-2;H0Y512 APMAP Adipocyte plasma membrane-associated protein yes no 0 0 0 2 0 1 62.188 62.198 3 0.046168 19614 20230619_1881_Aki_TMTPro18x_K_F2 40.724 14.21 126540 89087 120480 126380 119760 142680 135970 135980 153150 170980 137970 172350 174690 161860 157780 176720 173340 204990 116860 81908 122940 124740 124990 142830 136700 140300 154650 170950 144140 174380 176430 168100 161710 178880 165920 194290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113610000 10454 4555 9885 19995 16033 16033 1 9606 Homo sapiens 0.024740468228856116 GLFFEHDLR Unmodified 1132.5665 0.56654322 170 B4DKR6;A0A024R1X0;O15234;J3KSY7 CASC3 Protein CASC3 yes no 0 0 0 5.5 0.5 1 1 50.383 50.46 3 6.639E-09 14102 20230619_1886_Aki_TMTPro18x_K_F6 181.55 153.37 31409 27267 26146 30997 34284 35396 34082 32042 36502 33702 32833 29374 37689 26702 33514 31375 31856 30180 29014 24992 27148 31054 34954 35396 34439 33014 36914 33848 34051 29933 38072 27908 34048 31398 30484 28684 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78440000 10455 170 9886 19996;19997 16034;16035 16035 2 9606 Homo sapiens 0.005562611917866889 GLFIIDDK Unmodified 919.50148 0.50148335 1476;3838 A0A384NPQ2;Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5;V9HW63;Q13162;H7C3T4 PRDX1;HEL-S-97n;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 no no 0 0 0 4.93 2.12 1 1 2 2 2 2 2 2 60.653 60.685 2;3 0.0019235 18590 20230619_1883_Aki_TMTPro18x_K_F4 143.85 26.832 2215600 1814100 1878100 2173400 2126500 2440700 2177200 2141400 2505000 2706700 2675700 2767300 3011000 2946000 2268300 3642100 2338200 3114800 2046100 1663900 1941500 2168500 2192500 2441000 2202600 2223700 2542100 2707700 2751700 2814000 3029400 3067100 2331600 3615300 2241900 2961200 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 14139000000 10456 1476;3838 9887 19998;19999;20000;20001;20002;20003;20004;20005;20006;20007;20008;20009;20010;20011 16036;16037;16038;16039;16040;16041;16042 16038 7 9606 Homo sapiens 0.038512666659471506 GLFIIDGK Unmodified 861.496 0.49600404 3538 V9HW12;P32119;B4DF70 HEL-S-2a;PRDX2 Peroxiredoxin-2 yes no 0 0 0 4.17 2.54 1 1 1 1 1 1 60.413 60.434 2 0.0018478 18774 20230619_1881_Aki_TMTPro18x_K_F2 136.11 69.081 814340 695860 729690 767100 716090 783570 728350 722010 790710 810800 882960 895150 894420 827290 945160 946240 902860 1013600 752560 637650 748190 769310 745410 790020 735980 744470 805890 817270 902430 902760 915230 861670 957930 952800 865030 961570 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 5137500000 10457 3538 9888 20012;20013;20014;20015;20016;20017 16043;16044;16045;16046;16047;16048 16044 6 9606 Homo sapiens 0.05971587874137185 GLFIIDPNGVIK Unmodified 1284.7442 0.74417324 1441 A0A384MTR2;P30048-2;P30048;Q53HC2 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes no 0 0 0 2 0.816 1 1 1 63.418 63.431 3 0.057976 19879 20230619_1882_Aki_TMTPro18x_K_F3 43.502 28.53 41158 33046 44394 39336 35754 45887 43672 39693 60241 39236 41563 34007 40775 39497 46456 48618 33234 37762 38078 30310 44675 39310 38104 45749 44078 40977 59609 39587 43449 35004 41936 41010 46426 48104 31957 35965 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1661899999.9999998 10458 1441 9889 20018;20019;20020 16049 16049 1 9606 Homo sapiens 0.11319091671134629 GLFITIHDR Unmodified 1070.5873 0.58727866 2006 A8K168;P48163-2;P48163 ME1 Malic enzyme;NADP-dependent malic enzyme yes no 0 0 0 8 0 1 47.874 47.932 3 0.00017555 12640 20230619_1888_Aki_TMTPro18x_K_F8 109.29 79.817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10459 2006 9890 20021 16050 16050 1 9606 Homo sapiens 0.054808515714512396 GLFLPEDENLR Unmodified 1301.6616 0.66156582 3822 Q12797;Q12797-10 ASPH Aspartyl/asparaginyl beta-hydroxylase yes no 0 0 0 3 0 1 57.189 57.221 2 0.00024062 17255 20230619_1882_Aki_TMTPro18x_K_F3 150.27 110.56 155980 131590 146070 168350 170220 226600 211330 194270 255870 190790 191030 206100 207330 184740 211890 213390 198480 223160 144180 120760 149800 167690 176370 223840 211910 200620 255360 193650 199920 207790 211370 192760 214670 214530 190210 211760 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 67811000 10460 3822 9891 20022 16051;16052;16053 16052 3 9606 Homo sapiens 0.022801498723310942 GLFSANDWQCK Unmodified 1324.587 0.58702067 3347 O95218-2;O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes no 0 0 0 1 0 1 57.568 57.568 2 0.00011112 17497 20230619_1880_Aki_TMTPro18x_K_F1 160.36 138.28 38304 35602 41966 37695 34898 46127 49032 44230 48438 47496 41547 43482 50757 41138 46759 53556 51067 54032 35477 32603 42211 38036 37221 45954 48592 45406 49123 47708 43380 44251 51316 43187 47894 53623 48839 51304 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57034000 10461 3347 9892 20023 16054 16054 1 9606 Homo sapiens -0.06228936210709435 GLFTGLTPR Unmodified 960.53927 0.53926584 3996 Q53G34;Q9Y6C9;E9PIE4 MTCH2 Mitochondrial carrier homolog 2 yes no 0 0 0 4.5 0.5 1 1 54.377 54.418 2 0.0011666 15572 20230619_1885_Aki_TMTPro18x_K_F5 118.33 73.022 340130 306490 367060 400370 380930 444720 444110 435370 479700 341360 364350 340930 342950 282230 414820 369660 366440 312410 314910 281270 371130 397150 396350 445970 445140 442960 481590 350220 378370 344390 354060 297630 417610 367060 350700 297530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1012299999.9999999 10462 3996 9893 20024;20025 16055;16056 16056 2 9606 Homo sapiens 0.05741777651405755 GLFWANIRAAFNMK Oxidation (M) 1653.845 0.84496669 2267 D1CSA0;D1CS99;D1CS98;D1CS97;D1CS96;D1CS93;D1CS92;D1CS91;B6RFS7;B6CH45;B6CH44;B6CH42;B6CH37;B2R933;Q9Y2C9-2;Q9Y2C9 TLR6 Toll-like receptor;Toll-like receptor 6 yes no 0 1 1 5 0 1 45.91 45.987 5 0.071223 12066 20230619_1885_Aki_TMTPro18x_K_F5 41.401 26.442 78948 70467 77774 68607 50930 62989 68333 67075 76224 76645 67967 88056 94092 69175 87342 98532 87848 92288 73033 64495 78643 69452 55554 64251 68180 68524 76927 77276 71425 88194 94813 73561 89023 98158 84078 87705 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185940000 10463 2267 9894 20026 16057 16057 1412 1 9606 Homo sapiens 0.04419800382311223 GLGAGAGAGEESPATSLPR Unmodified 1696.838 0.83802663 3235 O15173;O15173-2 PGRMC2 Membrane-associated progesterone receptor component 2 yes no 0 0 0 4 0 1 45.709 45.753 3 1.7394E-31 12058 20230619_1883_Aki_TMTPro18x_K_F4 183.7 160.21 173270 119160 131870 159280 172740 192600 157870 150380 212540 204150 236080 246800 229500 203200 205600 256750 275550 264750 159750 109490 138170 157900 176020 191250 161710 158030 214340 204810 240860 247150 233430 213820 213630 257440 262890 251420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203290000 10464 3235 9895 20027 16058 16058 1 9606 Homo sapiens 0.017481142448104947 GLGAQEQGATDHIK Unmodified 1423.7056 0.7055559 4327 Q96BK5;E5RJG9;E5RGR1;Q9BT81-2;A0A0A6YYK5;Q96BK5-2 PINX1 PIN2/TERF1-interacting telomerase inhibitor 1 yes no 0 0 0 3.5 0.5 1 1 39.451 39.493 3 1.3738E-05 9311 20230619_1883_Aki_TMTPro18x_K_F4 115.8 90.259 131120 97660 119370 122180 144230 150220 138220 132190 174610 155000 164670 169160 179140 152650 156040 198730 204740 181890 121090 89646 122620 121740 147700 149390 140810 136900 175410 155930 170070 170590 181340 160410 161990 197890 195270 173020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150120000 10465 4327 9896 20028;20029 16059;16060 16060 2 9606 Homo sapiens 0.010651342986420786 GLGDCLVK Unmodified 860.44259 0.44258826 3439;3388 P05141;Q6NVC0;P12236;Q6I9V5;Q59EI9 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 0 0 5.5 2.69 1 1 1 1 49.134 49.193 2 0.0059672 13183 20230619_1887_Aki_TMTPro18x_K_F7 121.99 66.313 1839300 1431300 1594400 1693600 1931200 1976600 2194600 2019500 2425600 2064900 2041700 1842700 2613600 1876400 1751500 2656000 2631500 2253600 1698300 1312900 1645800 1692900 1985600 1978800 2203400 2061400 2442500 2078600 2135600 1884400 2607100 1976900 1849500 2631200 2506700 2146200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 8490999999.999999 10466 3388;3439 9897 20030;20031;20032;20033 16061;16062;16063 16062 3 9606 Homo sapiens 0.006784670999650189 GLGDRPAPK Unmodified 909.50321 0.50321468 4603 Q9NVI7-2;Q9NVI7;Q96T67;Q5T9A4;A0A5K1VW56 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B yes no 0 0 1 7.5 0.5 1 1 34.408 34.442 3 0.0044469 7254 20230619_1888_Aki_TMTPro18x_K_F8 78.264 59.952 311510 175630 308060 371960 444290 453570 429440 459250 538410 401240 480350 486640 510990 398650 427380 297470 546180 481990 287460 162570 315680 360150 450160 452260 437100 467100 539580 411410 496850 486840 516410 409200 441810 311370 520990 456070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 239040000 10467 4603 9898 20034;20035 16064;16065 16065 2 9606 Homo sapiens 0.04484320474557535 GLGEISAASEFK Unmodified 1207.6085 0.60846762 806;3082 P13591-1;A0A087WTF6;P13591;P13591-3;P13591-4;A0A087WV75;A0A087WWD4;A0A087WX77;A0A087WTE4;P13591-5;A0A087WWJ5;B4DSQ7;A0A087X1V2;A0A087WVU1;B7Z8D6;A0A0C4DGS4;H7BYX6 NCAM1 Neural cell adhesion molecule 1 no no 0 0 0 5.5 0.5 1 1 55.964 56.033 3 4.5313E-13 16479 20230619_1886_Aki_TMTPro18x_K_F6 166.29 132.42 115970 100590 117290 150450 114560 122870 128840 137350 141520 131840 137660 140870 138810 123180 147560 156360 153180 163560 107280 92462 119190 147390 119560 126630 129520 139220 143290 133800 141540 142050 142100 129390 150260 156970 146580 155230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 230890000 10468 806;3082 9899 20036;20037 16066;16067 16067 2 9606 Homo sapiens 0.012967720896540413 GLGFCHSR Unmodified 932.42867 0.42866953 901 Q6IAW3;A0A090N7W4;Q00535 CDK5 Cyclin-dependent-like kinase 5 yes no 0 0 0 1.5 0.5 1 1 33.122 33.151 3 4.7873E-05 6938 20230619_1881_Aki_TMTPro18x_K_F2 170.66 137.4 93027 64667 89081 99531 114350 145740 128430 119490 161830 107700 120750 100850 106230 91421 102960 135850 138250 111170 85908 59517 91314 98173 117360 143150 129610 123550 161120 109420 125050 102550 108810 96926 106880 134320 131750 105950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73212000 10469 901 9900 20038;20039 16068;16069 16069 2 9606 Homo sapiens -0.04024765608448888 GLGGEVPGSHQGPDPYR Unmodified 1721.8121 0.81214624 440 K7ELQ9;A0A024R7D3;Q6UW68;K7EM09;K7EPR0 TMEM205;UNQ501 Transmembrane protein 205 yes no 0 0 0 3.5 0.5 1 1 40.239 40.288 3 1.6944999999999998E-38 9642 20230619_1883_Aki_TMTPro18x_K_F4 257.54 223.75 104140 87240 112040 113660 76499 80611 106530 105510 106550 138020 135860 145730 164480 130260 151600 160900 146860 177850 96372 80079 112620 112220 82996 84618 105760 106990 109860 137880 139360 147050 166250 136570 154190 162110 140780 168630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363780000 10470 440 9901 20040;20041 16070 16070 1 9606 Homo sapiens -0.01988735206828096 GLGHQVATDALVAMEK Unmodified 1638.8399 0.83994089 4728 Q9Y3I0;B4DNA0 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 7 0 1 55.165 55.226 4 9.2358E-07 15860 20230619_1887_Aki_TMTPro18x_K_F7 120.3 97.077 110220 77580 96580 87274 93890 116050 100480 90471 89160 117480 101950 100870 122360 91944 108830 112350 114660 137480 101730 71159 99155 87749 98006 114580 100610 94914 92173 116740 104900 102820 123500 96347 111250 113950 109800 130230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 484750000 10471 4728 9902 20042 16071 16071 1 9606 Homo sapiens 0.046074517290435324 GLGILSLK Unmodified 799.51674 0.51673948 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 4.5 0.5 1 1 60.665 60.691 2 0.023267 18631 20230619_1883_Aki_TMTPro18x_K_F4 86.095 27.379 63500 59545 67502 70382 71625 88290 80742 81014 89380 62931 67967 54561 61928 52805 81877 66910 71652 69307 58801 54581 68338 70429 74377 87726 81138 82769 89617 64370 70438 55795 64348 55291 82259 67192 68638 65811 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75151000 10472 2863 9903 20043;20044 16072 16072 1 9606 Homo sapiens 0.10896178253801736 GLGLDDALEPR Unmodified 1154.5932 0.5931519 4699 Q9Y230;B4DW30;X6R2L4;M0R0Z0;A0A1W2PS48 RUVBL2 RuvB-like 2 yes no 0 0 0 2.5 0.5 1 1 53.177 53.223 2 1.4561E-08 15832 20230619_1881_Aki_TMTPro18x_K_F2 178.55 159.28 293810 248480 257720 302090 264070 300890 300860 309060 342600 346380 339840 351060 385970 326440 357240 373140 353870 398810 271460 227910 265180 300650 274970 304540 302550 316180 346690 348200 350940 355310 391050 340080 363680 375630 338920 378360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 597740000 10473 4699 9904 20045;20046 16073;16074 16073 2 9606 Homo sapiens 0.022039052924583302 GLGLDESGLAK Unmodified 1058.5608 0.56078914 1442 B5BUB1;A0A384MTR5;Q9Y265;Q9Y265-2 RUVBL1 RuvB-like 1 yes no 0 0 0 5 0 1 52.51 52.584 2 3.6762E-12 14827 20230619_1885_Aki_TMTPro18x_K_F5 209.6 156.88 149570 114370 135670 149010 142920 165230 163600 154380 180020 182030 185710 186320 211390 177850 179660 214310 212970 210080 138140 105020 139180 147820 148520 165570 164250 159230 182750 182640 191390 188720 213430 185680 185270 214440 203420 199590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206440000 10474 1442 9905 20047 16075 16075 1 9606 Homo sapiens 0.03385117889456524 GLGLGANLTEAQALTPTGPSR Unmodified 2023.0698 0.069817485 4311 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 1 0 1 58.698 58.698 3 8.2807E-13 17955 20230619_1880_Aki_TMTPro18x_K_F1 144.74 123.5 29250 23030 37696 38068 32126 38780 39879 40004 39954 41902 35371 36095 43494 41047 41333 44397 39114 36950 27105 21204 37517 37203 34010 39158 39774 40833 40550 42071 36881 37077 44056 42331 41961 44146 37431 35182 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 291860000 10475 4311 9906 20048 16076 16076 1 9606 Homo sapiens 0.09920536875688413 GLGLPGCIPGLLPENSMDCI Oxidation (M) 2128.0003 0.0002826355 448 A0A024R7G4;Q9NVP2;K7ES22;B4DXU6 ASF1B Histone chaperone ASF1B yes no 0 1 0 6 0 1 65.966 66.009 3 8.2131E-05 20764 20230619_1886_Aki_TMTPro18x_K_F6 74.12 65.188 6619.7 4439.8 3609.5 4797.4 5100.1 6143.9 3917.8 5394.6 5309.3 5158.5 6783 5492 6892.2 6007.6 6648.5 6574.2 4346 6087.7 6091.1 4071.7 3945.6 4832.7 5163.5 6093.2 4066.8 5551.6 5388 5237.9 6885.9 5586.5 7015.3 6208.4 6638.5 6571.5 4192.5 5780.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14107000 10476 448 9907 20049 16077 16077 279 1 9606 Homo sapiens -0.018597494512050616 GLGLPGCIPGLLPENSMDCI Unmodified 2112.0054 0.0053680134 448 A0A024R7G4;Q9NVP2;K7ES22;B4DXU6 ASF1B Histone chaperone ASF1B yes no 0 0 0 6.5 0.5 1 1 66.945 66.978 3 0.0034932 20893 20230619_1887_Aki_TMTPro18x_K_F7 67.299 59.011 17569 14161 13711 12116 10582 11612 13531 12127 13202 17835 14989 14387 21048 16908 16641 16102 14453 14413 16214 12953 14190 12418 11325 11808 13468 12508 13570 17610 15556 14840 21066 17322 16875 16107 13850 13707 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35731000 10477 448 9907 20050;20051 16078 16078 1 9606 Homo sapiens -0.00615445588618968 GLGLSPDLVVCR Unmodified 1284.686 0.68600643 3468 P17812;A0A3B3IRI2;B4E1E0;A0A8Q3WKZ7;B4DMB5;A0A8Q3WL40;A0A3B3IRQ8;A0A3B3ITF6;A0A3B3ITB8;B7Z9C4 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 4.5 3.5 1 1 57.013 57.039 2 1.3784E-12 17261 20230619_1880_Aki_TMTPro18x_K_F1 236.56 181.58 316330 263860 288060 298110 220950 289480 265320 263580 293520 356610 340820 334160 354110 311090 354140 392070 374510 410630 292320 241870 294030 298220 236460 292790 266030 273620 299630 354660 348060 339510 361050 325980 361460 393600 358380 389690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 699110000 10478 3468 9908 20052;20053 16079;16080 16079 2 9606 Homo sapiens 0.055050867541922344 GLGNTWTPICNTR Unmodified 1488.7143 0.71434645 2150 B3KMC2;B3KMD2;A8KAE0;O75717-2;O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes no 0 0 0 3 0 1 51.274 51.344 2 0.016576 14733 20230619_1882_Aki_TMTPro18x_K_F3 66.84 53.787 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10479 2150 9909 20054 16081 16081 1 9606 Homo sapiens -0.010462153365097038 GLGPLAEAAAAGDGAAAAGAAR Unmodified 1807.9177 0.91767394 3266 O43815;A0A097F6U9 STRN;ALK fusion Striatin;Tyrosine-protein kinase receptor yes no 0 0 0 6 0 1 55.82 55.894 3 0.0079383 16387 20230619_1886_Aki_TMTPro18x_K_F6 56.766 44.14 94381 71450 101460 96267 97299 104730 112340 108950 123380 108110 113470 113130 122650 103620 121650 133170 117010 128410 87285 65634 102390 95309 101750 105350 112750 111000 124640 109480 117320 114360 124830 108760 123530 133050 112080 121980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63061000 10480 3266 9910 20055 16082;16083 16082 2 9606 Homo sapiens 0.04603180918820726 GLGPLFK Unmodified 730.43776 0.43776088 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 3.5 0.5 1 1 56.812 56.833 2 0.022723 16974 20230619_1883_Aki_TMTPro18x_K_F4 106.84 55.936 287230 247230 272250 279410 282210 329850 320720 300980 356180 349610 316540 289700 358350 267330 325740 400030 337470 310910 265560 226590 278040 280260 293560 329080 322190 310760 359430 348960 328310 296290 362630 283610 332860 394650 322590 296350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 490560000 10481 4753 9911 20056;20057 16084 16084 1 9606 Homo sapiens 0.06175951019520198 GLGQECVLSSSPAVLALQTSLVFSR Unmodified 2618.3738 0.373787 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5 0 1 65.574 65.617 3 2.3985E-14 20419 20230619_1885_Aki_TMTPro18x_K_F5 143.32 136.05 4723.1 5143.4 6457.7 8096.5 7320.7 4325.9 6821.5 7262.4 4336.8 15381 17260 21868 21936 16800 15731 17551 19538 21641 4389.6 4727.6 6433.7 7882 7480 4738 6844.7 7438.7 5119.1 15278 17331 21708 21926 17546 16325 17850 18671 20504 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20413000 10482 3758 9912 20058 16085 16085 1 9606 Homo sapiens 0.1293350579799153 GLGSELSK Unmodified 789.42323 0.42323303 4167 Q7Z434-4;Q7Z434 MAVS Mitochondrial antiviral-signaling protein yes no 0 0 0 5.5 0.5 1 1 45.511 45.593 2 0.02478 11962 20230619_1886_Aki_TMTPro18x_K_F6 84.743 31.577 79824 53491 72486 84425 74133 90489 78422 90567 141390 98713 108450 120540 122010 117020 96323 133440 143300 144960 73671 49255 74347 82747 77206 90978 80763 92714 139020 100110 113440 121280 123040 121640 101190 134360 136660 137560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64225000 10483 4167 9913 20059;20060 16086 16086 1 9606 Homo sapiens 0.020098340807180648 GLGSTVQEIDLTGVK Unmodified 1515.8144 0.81443765 4332 Q96CN7;D6RGE2;Q9Y3B5 ISOC1 Isochorismatase domain-containing protein 1 yes no 0 0 0 6.5 0.5 1 1 59.535 59.589 3 1.2507999999999998E-19 17933 20230619_1886_Aki_TMTPro18x_K_F6 216.15 182.92 156790 124040 78576 155130 170020 190520 186600 100690 178180 187030 121810 200320 230480 238430 120900 202440 259170 224430 144350 113830 80225 154330 169970 187940 186500 104310 180100 185020 125600 203650 227060 242630 123650 205040 246390 213060 2 2 1 2 2 2 2 1 2 2 1 2 2 2 1 2 2 2 621450000 10484 4332 9914 20061;20062 16087;16088 16087 2 9606 Homo sapiens 0.0771630047825056 GLGTDEDSLIEIICSR Unmodified 1776.8564 0.85637882 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;A6NMY6;H0YMU9;H0YL33;H0YM50;B3KRQ1;B4DNH8;H0YNB8;H0YKS4;H0YN28;H0YNP5;A0A7I2V4P4;H0YMM1;H0YNA0;H0YLE2 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 3 0.816 1 1 1 63.653 63.669 2 4.9271999999999995E-19 19978 20230619_1882_Aki_TMTPro18x_K_F3 240.65 210.71 186260 147270 154960 181710 164540 185850 179750 188530 199140 220760 220430 204320 232930 218150 224000 249720 238220 253930 171960 135130 160330 180720 170680 187680 181010 193250 202760 220870 225630 208750 237040 226200 228870 250600 227900 241080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 437980000 10485 368 9915 20063;20064;20065 16089;16090 16089 2 9606 Homo sapiens -0.0009751189552389405 GLGTDEDTIIDIITHR Unmodified 1767.9003 0.90029254 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 0 4 0.707 1 2 1 63.096 63.116 3 3.1190999999999998E-112 19669 20230619_1882_Aki_TMTPro18x_K_F3 367.11 337.1 86442 79634 91874 101620 97047 99860 99995 91445 101040 109720 121760 127320 110940 114280 126200 129670 131620 142380 80035 73057 93004 100780 100380 100950 100710 94554 103730 110430 123560 128010 114430 119050 128380 130760 125960 135060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 488300000 10486 1062;1064 9916 20066;20067;20068;20069 16091;16092;16093 16091 3 9606 Homo sapiens 0.04705840593146604 GLGTDEESILTLLTSR Unmodified 1703.8941 0.89414453 3416 V9HWE0;P08758;E9PHT9;B4DNG6 HEL-S-7;ANXA5 Annexin;Annexin A5 yes no 0 0 0 6 0.816 1 1 1 65.048 65.086 3 3.2198E-64 20201 20230619_1885_Aki_TMTPro18x_K_F5 254.45 216.85 43233 36342 59824 55361 77317 82863 71926 76088 65683 87471 76631 84379 92005 62959 92416 96774 86779 92284 40110 33418 59633 54691 78683 81525 72669 78445 67863 87630 78870 85058 93315 67508 93682 96434 83122 87679 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 688540000 10487 3416 9917 20070;20071;20072 16094;16095;16096 16094 3 9606 Homo sapiens 0.07035322361616636 GLGTGQGAVSGPPR Unmodified 1252.6524 0.65239812 333 E7EN32;A0A024R5E3;A0A024R5D2;A0A5F9ZHS3;O00255-2;O00255;Q9UE24;A0A8C8KI72;A0A024R570;O00255-3;G9G6R5 MEN1 Menin yes no 0 0 0 8 0 1 38.354 38.34 3 4.1778E-07 8841 20230619_1888_Aki_TMTPro18x_K_F8 137.31 116.52 22910 15875 22506 25796 28071 28027 28325 35481 32093 24790 27947 28106 33949 23705 27312 28492 33920 25740 21161 14621 22998 25258 28702 28330 28673 35420 32300 25722 29129 28249 34115 24867 28256 28402 32334 24507 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22790000 10488 333 9918 20073 16097 16097 1 9606 Homo sapiens 0.036178013066546555 GLGTGTLYIAESR Unmodified 1336.6987 0.69867961 2938 E9PMI6;J3KN38;P54105;E9PJF4 CLNS1A Methylosome subunit pICln yes no 0 0 0 7.5 0.5 1 1 51.988 52.063 3 1.8462E-21 14403 20230619_1888_Aki_TMTPro18x_K_F8 185.57 166.25 325200 279410 291900 308520 281350 336460 321970 315020 359190 375270 345650 329800 387660 326230 332210 423640 385310 392530 300540 256040 299260 309650 294470 337660 323480 324910 363510 374680 356990 336900 391720 341820 342230 422130 368200 373130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1111200000 10489 2938 9919 20074;20075 16098;16099 16099 2 9606 Homo sapiens 0.04379821418069696 GLGVEIAK Unmodified 785.4647 0.46470391 134 A0A024R1A3;P22314-2;P22314;Q5JRR9;Q5JRS0;Q5JRS2;Q5JRS1;Q5JRS3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 7 0.816 1 1 1 49.969 50.047 2 0.0025474 13922 20230619_1886_Aki_TMTPro18x_K_F6 136.11 57.617 872480 673350 852410 824910 926040 982940 983500 969930 1093800 978470 1194900 1198100 1102900 1021800 1073500 1225800 1271900 1226000 806320 617880 868500 822940 957350 981760 991880 992020 1111400 995240 1217300 1200800 1127900 1070000 1103900 1228200 1214700 1164700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1677599999.9999998 10490 134 9920 20076;20077;20078 16100;16101 16100 2 9606 Homo sapiens 0.06339014840034451 GLGWVQFSSEEGLR Unmodified 1563.7682 0.76815616 816 A0A087WUN7;H0YJ40;G3V4X6;G3V2S9;Q9GZT3-2;Q9GZT3;H0YJW7 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes no 0 0 0 6.5 0.5 1 1 61.352 61.399 2 4.2083E-08 18744 20230619_1886_Aki_TMTPro18x_K_F6 181.4 154.73 450310 374900 455190 421970 361100 492900 461740 430640 529960 554220 499470 570730 573810 447100 597910 602330 582340 687690 416470 343640 460490 423390 386010 491490 461920 447620 535140 553960 517830 574150 584140 473840 606760 607490 558060 651880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 966400000 10491 816 9921 20079;20080 16102;16103 16102 2 9606 Homo sapiens 0.00882280366863597 GLGYAQYLPK Unmodified 1108.5917 0.59169534 1777 D3DUJ0;A0A8I5KVV1;Q8TA92;Q9Y4W6;A0A8I5QJR7 AFG3L2 AFG3-like protein 2 yes no 0 0 0 3 0 1 56.126 56.163 3 0.0031295 16869 20230619_1882_Aki_TMTPro18x_K_F3 76.221 42.993 24307 23830 23901 27824 29787 33076 33500 29019 35565 23510 25059 21118 23126 23470 30635 27065 28075 22243 22500 21838 24432 27836 30571 32957 33599 29792 35654 24016 26115 21657 24052 24300 30856 26887 26846 21199 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19516000 10492 1777 9922 20081 16104 16104 1 9606 Homo sapiens 0.041743159943507635 GLHCMCTVGER Oxidation (M) 1334.553 0.55296012 1000 Q96HC9;Q9NW71;B7Z4L9;A0A0C4DG80;Q9P2N7-2;Q9P2N7-3;Q9P2N7-4;Q9P2N7;Q9P2N7-5 KLHL13 Kelch-like protein 13 yes no 0 1 0 5 0 1 29.596 29.67 3 0.00013232 5557 20230619_1885_Aki_TMTPro18x_K_F5 113.63 100.2 6611.4 3513.1 4400.8 4247.9 6752.3 7295.8 6022.4 6025.2 7359.9 7000.4 5933.8 5597.5 7943.7 6276.7 6753.1 7900.2 7722.8 6594.9 6083.1 3229.1 4688.5 4269.6 6814.9 7117 6153 6263.9 7371.9 6983.9 6241 5772.5 7985.5 6539.9 6947.1 7837.1 7371.9 6281.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7378900 10493 1000 9923 20082 16105 16105 562 1 9606 Homo sapiens -0.10093423965622605 GLHTVLSK Unmodified 853.50215 0.50215205 4559 Q9NPA3 MID1IP1 Mid1-interacting protein 1 yes yes 0 0 0 3 0 1 41.892 41.955 3 0.014489 10447 20230619_1882_Aki_TMTPro18x_K_F3 70.856 48.143 91251 67424 95228 96694 76480 87233 84447 74807 100980 97922 108440 97435 116020 80775 88852 133720 135160 90340 84356 61986 96120 95093 81172 88628 85237 77976 102230 97733 111130 98493 116810 86679 93616 130970 128560 86430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45567000 10494 4559 9924 20083 16106 16106 1 9606 Homo sapiens 0.0695410610566114 GLHVVEIR Unmodified 921.5396 0.53960019 1800 A0A8Q3SIP9;A0A8Q3WKG3;P82675 MRPS5 28S ribosomal protein S5, mitochondrial yes no 0 0 0 6.5 0.5 1 1 39.815 39.892 3 0.0003582 9198 20230619_1887_Aki_TMTPro18x_K_F7 145.34 84.554 64934 46481 64283 72144 70968 86750 75886 66534 89101 71989 85707 99754 98973 87067 69534 101990 102940 107760 59990 42779 65517 70878 73399 86096 76614 69569 89833 73369 88735 99577 99248 90991 73248 102480 98207 102280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81288000 10495 1800 9925 20084;20085 16107;16108 16108 2 9606 Homo sapiens 0.07569197371287828 GLHYDVQR Unmodified 986.49338 0.49337828 4187 Q86UY8-2;Q86UY8 NT5DC3 5'-nucleotidase domain-containing protein 3 yes no 0 0 0 5.5 0.5 1 1 34.052 34.117 3 0.00036723 7206 20230619_1885_Aki_TMTPro18x_K_F5 133.55 102.47 36531 25080 39155 40518 47181 44963 47185 40261 47981 24222 37869 33200 31406 25350 35302 31850 38444 29342 33765 23098 39680 39686 48298 45017 47579 41064 48329 25655 39028 33080 32443 26744 35979 31777 36690 27929 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27274000 10496 4187 9926 20086;20087 16109 16109 1 9606 Homo sapiens -0.00040867530822197295 GLIAAICAGPTALLAHEIGFGSK Unmodified 2266.2144 0.21437323 4402 V9HWC2;Q99497;K7ELW0;K7EN27 HEL-S-67p;PARK7 Protein deglycase DJ-1 yes no 0 0 0 5 0 1 64.752 64.797 3 0.07359 20087 20230619_1885_Aki_TMTPro18x_K_F5 35.973 18.272 8079.2 5669.6 6609.2 8155.1 6432.3 8304 7836 6358.6 6495 9394.4 8029.1 9378.4 10835 7685.9 8807.5 10533 8841.5 10161 7452.8 5213.7 6844.5 8027 6741.6 8336.8 7777.5 6718.8 6771.6 9326.7 8298.8 9458.6 10861 8141.6 9003.5 10512 8468.3 9649.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154730000 10497 4402 9927 20088 16110 16110 1 9606 Homo sapiens 0.13191462031318224 GLIENPALLR Unmodified 1094.6448 0.64479354 3344 O95168-2;O95168 NDUFB4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 yes no 0 0 0 7.5 0.5 1 1 53.47 53.54 2 2.1245E-05 15062 20230619_1888_Aki_TMTPro18x_K_F8 169.09 131 476800 460700 477490 550670 590540 707570 619010 612250 669620 466890 532350 502350 534750 450000 542460 545230 538980 533890 441390 422310 487280 550660 605610 701220 623870 628170 673170 481150 552700 507030 546070 470940 551290 545770 515690 507230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 296130000 10498 3344 9928 20089;20090 16111;16112;16113 16113 3 9606 Homo sapiens 0.10125693777035849 GLIHPDDSVK Unmodified 1079.5611 0.56112349 2051 A8K4T6;Q16401-2;Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes no 0 0 0 4 0 1 41.863 41.906 3 0.00011968 10353 20230619_1883_Aki_TMTPro18x_K_F4 126.39 96.914 107430 80760 95737 109480 125750 134500 129490 129770 142770 118690 138700 133110 141190 127090 128250 139920 150640 146980 99199 74193 98770 108500 128340 133980 130720 132590 144450 121040 142570 134350 143470 131940 131940 140780 143890 139540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132750000 10499 2051 9929 20091 16114 16114 1 9606 Homo sapiens 0.024525376093151863 GLIPVFALGR Unmodified 1041.6335 0.63350058 3987 Q53F02;Q9UKF6;G5E9W3;Q05BZ5 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes no 0 0 0 6.5 0.5 1 1 62.98 63.02 2 0.0054324 19500 20230619_1886_Aki_TMTPro18x_K_F6 89.298 36.128 124470 121200 110980 117590 109290 133990 117420 116360 150270 84376 76500 63695 68916 61133 100390 87651 79706 72552 115130 110900 113880 119340 114070 133880 118910 119250 148090 86509 81611 65614 72115 64535 100310 86854 76412 69097 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 348430000 10500 3987 9930 20092;20093 16115 16115 1 9606 Homo sapiens 0.11434916473581325 GLLDDLRNDLDR Unmodified 1413.7212 0.72120596 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 1 3.5 0.5 1 1 59.022 59.052 3 8.1146E-07 18046 20230619_1882_Aki_TMTPro18x_K_F3 133.49 102.62 43093 35448 39985 42853 40906 48454 46707 41876 47303 42791 48308 49843 51891 48569 56986 57484 52023 57061 39824 32515 40914 42740 42597 48416 46772 43283 48182 43432 49710 50263 53113 50587 57589 57602 49858 54183 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17754000 10501 673 9931 20094;20095 16116;16117 16116 2 9606 Homo sapiens 0.03089420815695121 GLLDSIR Unmodified 772.4443 0.44430282 4820 yes yes 0 0 0 7 0 1 48.778 48.865 2 0.0074515 13047 20230619_1887_Aki_TMTPro18x_K_F7 125.08 0 + 205740 174170 194910 214150 200350 244740 238550 251930 281560 230160 232510 258280 255360 211110 220780 264450 267180 282930 190200 159770 199150 213400 208950 245250 239630 256250 282320 234670 242030 259310 258290 222190 227910 265780 255290 268480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167560000 10502 4820 9932 20096 16118 16118 1 9606 Homo sapiens 0.04897844180231914 GLLDVLPK Unmodified 853.5273 0.52730417 2891 E7EMW7;O95071-2;O95071;E7ET84;B3KML2 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 0 0 0 1 0 1 61.145 61.145 2 0.035473 18971 20230619_1880_Aki_TMTPro18x_K_F1 75.189 53.418 110140 95554 110460 89567 35718 40652 44145 44139 44734 99532 95361 98591 108230 87504 95816 122550 110760 122480 101890 87438 110870 90449 43261 45021 44264 46430 47784 97488 96041 99750 109430 92511 98628 122490 105910 116290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15690000 10503 2891 9933 20097 16119 16119 1 9606 Homo sapiens 0.09468160908238588 GLLDVTCK Unmodified 904.4688 0.46880301 2881 E5RJR5;E5RI56;P63208;E7ERH2;F8W8N3;P63208-2;P78561 SKP1 S-phase kinase-associated protein 1 yes no 0 0 0 6.75 0.829 2 1 1 52.457 52.532 2 0.0011276 14685 20230619_1887_Aki_TMTPro18x_K_F7 148.38 68.785 1083600 860280 1040300 913230 971010 1164000 1134300 1084800 1005900 1474800 1356500 1340000 1574100 1246300 1085700 1744600 1540000 1540500 1001500 788270 1058700 921950 1018700 1156400 1130900 1123700 1048400 1464600 1384200 1363700 1576100 1315300 1141300 1731600 1469000 1465300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1548799999.9999998 10504 2881 9934 20098;20099;20100;20101 16120;16121;16122 16121 3 9606 Homo sapiens 0.01274736271443544 GLLEFEHQR Unmodified 1127.5724 0.57235688 3900;2497 Q14697-2;E9PKU7;B4DZ53;E9PNH1;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 4 0.816 1 1 1 44.167 44.232 3 1.3143E-17 11346 20230619_1883_Aki_TMTPro18x_K_F4 211.48 176.76 377150 346700 342480 372110 411480 387140 422060 448440 451910 419930 432990 466460 455190 409270 467400 524160 457860 503660 348740 317540 351940 374130 421760 392050 425920 453040 457980 427260 446480 469620 464600 429960 474890 523580 438490 478430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1614099999.9999998 10505 3900;2497 9935 20102;20103;20104 16123;16124 16123 2 9606 Homo sapiens 0.013673597034767226 GLLFHPEWVVK Unmodified 1323.7339 0.7339429 445 B4DRY5;A0A024R7F7;O14787-2;Q4LE60;O14787;A0A075B780;Q05D48;B3KPC8 TNPO2;TNPO2 variant protein Transportin-2 yes no 0 0 0 3 0 1 60.974 61.003 3 6.2439E-05 18821 20230619_1882_Aki_TMTPro18x_K_F3 127.42 98.337 113960 85731 101410 110110 93310 123880 114130 127230 150350 147080 128660 148670 175360 154430 105760 207210 195830 211420 105230 78714 104020 109380 98379 124240 115010 130220 150340 147660 135120 151100 174340 161900 114300 207270 186600 200700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 151710000 10506 445 9936 20105 16125;16126 16125 2 9606 Homo sapiens 0.08502528736539716 GLLGALTSTPYSPTQHLER Unmodified 2040.064 0.064003825 572 Q9NUQ9;A0A024R9G4;A0A8V8TMP7;Q68D08;E5RI16 FAM49B;DKFZp686B04128 Protein FAM49B yes no 0 0 0 3 0 1 57.967 57.998 3 0.0026651 17598 20230619_1882_Aki_TMTPro18x_K_F3 60.764 38.566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10507 572 9937 20106 16127 16127 1 9606 Homo sapiens 0.08557438364005066 GLLGCNIIPLQR Unmodified 1352.7598 0.75984008 3123 J3KN29;O00233;O00233-3 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes no 0 0 0 5 0 1 60.209 60.261 2 2.977E-06 17987 20230619_1885_Aki_TMTPro18x_K_F5 178.94 144.69 90218 79100 96809 104400 84643 111440 114140 109170 111430 107360 110640 103040 111610 93756 107390 125990 114140 114220 83509 72605 97695 103440 89758 112040 113300 111650 113620 108470 113560 104570 113680 98717 109750 125370 109140 108610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 331450000 10508 3123 9938 20107 16128 16128 1 9606 Homo sapiens 0.0975705491653116 GLLGDAPNDPR Unmodified 1123.5622 0.56218613 2592;4494 B4DUD5;P33240-2;P33240;E9PID8;E7EWR4;B3V096;Q9H0L4 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant no no 0 0 0 3.5 0.5 1 1 44.388 44.447 2 0.00028922 11581 20230619_1882_Aki_TMTPro18x_K_F3 121.5 80.516 97111 84817 88817 106500 105280 114640 102130 97691 116030 116260 122870 118810 125680 104510 117240 129810 121330 128960 89770 77812 91262 105840 107990 114930 103590 101500 117730 116600 125840 120040 127760 109630 119660 129960 116100 122470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191790000 10509 2592;4494 9939 20108;20109 16129 16129 1 9606 Homo sapiens 0.005347519782162635 GLLGSADK Unmodified 759.41267 0.41266834 2345 B3KM73;D3DVL7;B4DU42;Q969Z0-2;Q969Z0;B3KRS4;B3KMT3;H7C4R5 TBRG4 Protein TBRG4 yes no 0 0 0 6.5 0.5 1 1 46.031 46.118 2 0.012739 12174 20230619_1886_Aki_TMTPro18x_K_F6 103.83 38.795 264060 196660 260950 277950 281320 333980 310750 297740 360790 293000 373670 379640 403080 336860 339340 312140 429970 362320 244010 180760 265800 274650 291620 332480 313150 306620 364920 299180 384050 379980 407440 347620 350990 317040 410050 343850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 248810000 10510 2345 9940 20110;20111 16130 16130 1 9606 Homo sapiens 0.023338514262832177 GLLHSFDLLK Unmodified 1141.6495 0.64954457 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;C9IZE1;H7C5Q3 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 2.5 0.5 1 1 60.546 60.566 3 2.6359E-07 18666 20230619_1882_Aki_TMTPro18x_K_F3 180.67 124.11 228040 212960 216850 192920 207530 260350 245630 224970 289270 74940 64395 43632 55035 43031 137220 55485 56823 43002 210960 194770 220980 197580 217640 257370 246620 228300 282530 83264 76297 45881 60388 45098 133190 55128 55049 41026 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69411000 10511 4468 9941 20112;20113 16131;16132 16132 2 9606 Homo sapiens 0.08438577919810086 GLLLPPPMK Unmodified 964.57796 0.57795953 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 0 4 0 1 59.72 59.722 3 0.0045761 18204 20230619_1883_Aki_TMTPro18x_K_F4 73.931 51.783 26536 20487 20248 25321 23214 25496 29010 27575 28504 31189 26534 26814 31317 25932 26909 31243 33483 30582 24481 18800 21171 25175 24039 25818 28887 28125 29016 31187 27531 27386 31605 27068 27825 31262 31953 29065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19386000 10512 817 9942 20114 16133 16133 1 9606 Homo sapiens 0.09425366961579584 GLLLSCIEDK Unmodified 1146.5955 0.59546009 1054 B7ZB80;B4E2N3;A0A140VKB3;A0A0K2GN21;P21953 BCKDHB 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial yes no 0 0 0 6.5 0.5 1 1 60.57 60.62 3 0.00069281 18371 20230619_1886_Aki_TMTPro18x_K_F6 105.2 86.97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10513 1054 9943 20115;20116 16134;16135 16134 2 9606 Homo sapiens 0.028026177059018664 GLLLYGPPGTGK Unmodified 1171.6601 0.66010926 1758 K7EM02;A0A8I5KR90;K7EPQ6;K7EIJ8;A0A8I5QL41;Q8IYT4-2;Q8IYT4 KATNAL2 Katanin p60 ATPase-containing subunit A-like 2 yes no 0 0 0 3.5 0.5 2 2 57.212 57.231 2;3 1.3365E-06 17290 20230619_1882_Aki_TMTPro18x_K_F3 175.93 0 473850 351140 446720 460520 464860 532210 535850 507430 524510 572400 588080 546440 620610 516540 574320 604110 585190 642680 437690 322500 456470 457010 483380 532070 535870 521850 537810 574150 601600 555090 630020 538630 585610 607750 560200 609800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1395700000 10514 1758 9944 20117;20118;20119;20120 16136;16137 16136 2 9606 Homo sapiens 0.08114560574222196 GLLNAIVIK Unmodified 939.6117 0.6117025 1194 A0A140VJQ4;P04181;P04181-2;Q59HE2 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes no 0 0 0 5 0 1 62.007 62.056 2 0.023149 18817 20230619_1885_Aki_TMTPro18x_K_F5 75.854 31.407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10515 1194 9945 20121 16138 16138 1 9606 Homo sapiens 0.13948111724971568 GLLNDAFQK Unmodified 1004.5291 0.52909508 2473 E5RI53;H0YAW7;E5RFH6;B4E1M2;E5RFU2;B4DFE9;P34913 EPHX2 Bifunctional epoxide hydrolase 2;Cytosolic epoxide hydrolase 2;Lipid-phosphate phosphatase yes no 0 0 0 8 0 1 55.804 55.866 2 0.00015985 16112 20230619_1888_Aki_TMTPro18x_K_F8 159.37 95.882 40253 32316 39914 42897 37073 44754 49042 42423 50374 39996 58482 60346 47155 46223 56423 48685 56240 62878 37214 29674 40561 42469 39073 45045 48787 43476 51478 41184 59160 59865 48963 48252 57162 49705 53857 59547 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17352000 10516 2473 9946 20122 16139 16139 1 9606 Homo sapiens 0.02701169926183411 GLLPEELTPLILATQK Unmodified 1735.0131 0.013137454 1075 P13804;A0A0S2Z3L0;A0A0S2Z3M4;P13804-2;H0YLU7;A0A8I5KVL5;A0A8I5KYH4;A0A8I5KYP7;A0A8I5KUF3;H3BV91;H0YKF0;A0A8I5KT03;A0A8I5KUR2;A0A8I5KVC9 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes no 0 0 0 3.67 3.09 1 1 1 65.305 65.314 3 3.9067E-11 20076 20230619_1888_Aki_TMTPro18x_K_F8 118.51 106.36 19051 14277 20890 22777 20365 19016 24854 21246 23663 20925 24130 22576 26017 23523 26055 22190 27198 27676 17620 13142 21070 22246 21272 19566 24758 21563 24181 21222 24817 22884 26504 24166 26534 22642 26015 26227 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 303190000 10517 1075 9947 20123;20124;20125 16140;16141 16141 2 9606 Homo sapiens 0.17503141057136418 GLLPGCVYHVQLK Unmodified 1482.8017 0.80170489 1037;1668 A0A0G2JN29;Q15155;A0A0G2JP90;Q9H049;A0A7I2V4T6;A0A7I2V6B0;J3KN36;Q5JPE7-2;P69849;Q5JPE7;A0A7I2V3P4;A0A7I2V2Z5;Q5JPE7-3;Q1LZN2;A0A087WTD5 NOMO1;DKFZp547A1913;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 2;Nodal modulator 3 no no 0 0 0 4 0 1 55.056 55.068 3 5.5719E-06 16267 20230619_1883_Aki_TMTPro18x_K_F4 123.8 98.415 97472 88998 83184 93841 106650 132670 122290 113420 155610 77837 83722 87937 86644 74734 96269 100300 85433 87608 90086 81502 86150 94892 109540 130740 123300 116260 153510 81051 89473 88434 88829 78840 97151 99662 81862 83337 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37115000 10518 1037;1668 9948 20126 16142 16142 1 9606 Homo sapiens 0.07961610605048008 GLLQSGQIPGR Unmodified 1124.6302 0.63020611 3422 Q53G61;Q53G21;P09661;H0YLR3;H0YMA0 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 0 2.33 0.471 2 1 46.633 46.712 2;3 3.085E-07 12896 20230619_1881_Aki_TMTPro18x_K_F2 139.15 99.887 706780 605230 622200 658530 726300 763000 716600 682230 821430 798230 795300 800360 884450 684400 796450 942010 865480 896560 653080 554530 640800 662230 745930 762140 726290 705720 830170 800680 821160 808720 895270 723700 816060 939480 827630 851920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 432490000 10519 3422 9949 20127;20128;20129 16143;16144;16145 16144 3 9606 Homo sapiens 0.07287621628915986 GLLQTEPQNNQAK Unmodified 1439.7369 0.73685603 4726 Q9Y3D6 FIS1 Mitochondrial fission 1 protein yes yes 0 0 0 6.5 0.5 1 1 44.537 44.622 3 0.00011162 11201 20230619_1887_Aki_TMTPro18x_K_F7 98.902 84.667 67326 51932 62538 76567 76112 79730 77225 76741 102050 67408 88643 93163 87789 77392 87440 100150 100520 100220 62196 47750 64213 75295 78031 80297 78544 78389 101880 69477 91577 92937 89652 81517 89714 100240 96050 95189 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 431760000 10520 4726 9950 20130;20131 16146 16146 1 9606 Homo sapiens 0.03457707332768223 GLLSDSMTDVPVDTGVAAR Unmodified 1902.9357 0.93569177 861 Q6FGS1;Q53GA0;A0A087WYR3;O43399;O43399-5;O43399-7;Q68E05;O43399-2;O43399-4;O43399-3;A0A087WZ51 TPD52L2;DKFZp686A1765 Tumor protein D54 yes no 0 0 0 4.5 0.5 1 1 59.246 59.274 3 4.3838E-20 17984 20230619_1883_Aki_TMTPro18x_K_F4 189.67 172.6 85072 77972 80969 85726 83379 112050 90203 88136 85502 87623 87379 86295 89212 77453 81795 96177 93929 95718 78691 71431 82683 86286 86740 110730 90432 91678 87484 88551 89648 87391 90661 81174 84056 96281 89766 90912 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 723060000 10521 861 9951 20132;20133 16147;16148 16147 2 9606 Homo sapiens 0.0203413505860226 GLLSILR Unmodified 770.50142 0.50142377 3553 P36405 ARL3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 5.5 0.5 1 1 59.837 59.893 2 0.035385 17874 20230619_1885_Aki_TMTPro18x_K_F5 92.822 18.426 219330 198430 175220 158560 210690 337710 208120 204060 352180 87159 79859 94424 89677 85990 109150 100250 98885 109240 202610 181340 182230 165870 217230 324670 214170 214470 338910 95277 95297 95316 92350 89702 110030 101050 94783 103620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92261000 10522 3553 9952 20134;20135 16149 16149 1 9606 Homo sapiens 0.10699311456619398 GLLTILK Unmodified 756.51093 0.51092582 3552 Q53YD8;P36404;V9GYD0;B4DGG0;P36404-2 hCG_23373;ARL2;ARL2-SNX15 ADP-ribosylation factor-like protein 2 yes no 0 0 0 4 0 1 61.912 61.917 2 0.02446 19121 20230619_1883_Aki_TMTPro18x_K_F4 89.369 5.9923 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10523 3552 9953 20136 16150 16150 1 9606 Homo sapiens 0.1229307974213043 GLLTLFATT Unmodified 935.53278 0.53278348 1110 A0A0S2Z4Y5;Q5QPK2;H0Y368;O60762;A0A804HJ93 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes no 0 0 0 3 0.816 1 1 1 67.162 67.185 2 0.00011483 21270 20230619_1883_Aki_TMTPro18x_K_F4 125.86 111.86 11159 7825.5 10355 12557 9099.6 15379 11264 11523 14385 6968 7249.5 9421.4 6922 7101.2 11168 8749.6 10494 5161.4 10303 7205.9 10587 12316 9658.9 15226 11325 11921 14167 7377 7783.9 9372.9 7290.2 7473.4 11229 8576.6 10010 4959.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28359000 10524 1110 9954 20137;20138;20139 16151;16152 16152 2 9606 Homo sapiens 0.06243839700039189 GLLTTGK Unmodified 688.41194 0.41194006 690 F5H5U2;A0A384N652;A0A024RBS0;Q8NHQ9;Q8NHQ9-2 DDX55 ATP-dependent RNA helicase DDX55 yes no 0 0 0 2 0 1 45.807 45.889 2 0.022415 12532 20230619_1881_Aki_TMTPro18x_K_F2 91.626 26.823 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10525 690 9955 20140 16153 16153 1 9606 Homo sapiens 0.05527056777248163 GLLVDRPSETK Unmodified 1213.6667 0.6666512 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3;Q69YJ6;G3V3B0;Q9UKV3-3;Q9UKV3-2 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 1 7 0.816 1 1 1 42.468 42.525 3 8.9238E-05 10270 20230619_1887_Aki_TMTPro18x_K_F7 114.76 82.755 443640 369960 407590 439260 463520 529580 520340 469180 576040 527690 565190 531840 605290 497110 517560 613600 574500 556100 410000 339280 418160 439100 478790 527270 522900 485160 583150 530510 581880 538840 612230 520090 531510 611280 549000 528860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 984390000 10526 2896 9956 20141;20142;20143 16154;16155 16155 2 9606 Homo sapiens 0.0683645373494528 GLLYECCVEFCQSK Unmodified 1791.763 0.76301248 3340 O94967-2;O94967;O94967-3;O94967-4;B4DHA1 WDR47 WD repeat-containing protein 47 yes no 0 0 0 6.5 0.5 1 1 59.034 59.091 3 0.0024225 17443 20230619_1887_Aki_TMTPro18x_K_F7 71.933 65.353 38889 35835 44315 39136 24396 22657 29508 26927 29751 34999 36359 33091 36478 27389 42205 37534 49581 28406 36029 32826 44216 39074 27002 24299 29514 27470 30578 34862 36996 33500 37483 28980 43187 37065 47221 27155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41976000 10527 3340 9957 20144;20145 16156 16156 1 9606 Homo sapiens -0.10119850873957148 GLMLVHNK Unmodified 910.50586 0.50585722 2030 A8K3S1;P46926;D6RAY7;P46926-2;D6RFF8;B3KMV2 GNPDA1 Glucosamine-6-phosphate isomerase;Glucosamine-6-phosphate isomerase 1 yes no 0 0 0 3 0 1 43.19 43.256 3 0.00014237 11030 20230619_1882_Aki_TMTPro18x_K_F3 162.51 111.55 193980 172870 168470 154410 188130 200600 190220 181250 210900 117910 115890 94662 98141 83408 169760 120890 121330 88038 179270 158120 173460 158250 193930 199040 192250 184800 209620 122030 122620 96938 104140 88359 168410 119220 116320 84089 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117450000 10528 2030 9958 20146 16157 16157 1 9606 Homo sapiens 0.04702452607864416 GLMPDGTSR Oxidation (M) 948.43348 0.43348014 3436 Q6IRT1;Q6FI45;P11766;Q5U043;Q2VIM7;H0YAG8 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 yes no 0 1 0 3.5 1.12 1 1 1 1 33.268 33.337 2 0.0049409 6735 20230619_1882_Aki_TMTPro18x_K_F3 91.516 71.73 120470 87477 118270 119040 168880 186920 140160 151480 203480 140620 178860 196670 168140 154090 168550 143080 207240 187170 111300 80379 121090 118470 170780 183000 144930 156840 202500 144540 184320 195580 172090 159740 173360 146540 197770 177380 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 146200000 10529 3436 9959 20147;20148;20149;20150 16158;16159;16160 16158 2062 3 9606 Homo sapiens -0.04279926256344879 GLMPDGTSR Unmodified 932.43857 0.43856552 3436 Q6IRT1;Q6FI45;P11766;Q5U043;Q2VIM7;H0YAG8 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 yes no 0 0 0 4.5 0.5 1 1 39.929 39.995 2 0.0012666 9504 20230619_1883_Aki_TMTPro18x_K_F4 117.4 95.871 187670 134360 157050 172300 214920 255100 188870 196040 280520 220410 263570 269640 272740 254130 203940 303770 306610 280540 173170 123390 163060 171890 218370 250240 194740 204950 279720 223180 271530 271110 275070 265090 214800 302880 292190 266800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 111840000 10530 3436 9959 20151;20152 16161;16162 16161 2 9606 Homo sapiens -0.030356223937246796 GLNISAVR Unmodified 828.48175 0.48175096 2578 P23588;E7EX17;B4DRM3;B4DEP6;F8VX11;F8VP89;F8VSC7;F8W0K0;F8VYE9;F8VRU1 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 0 2 0.816 1 1 1 43.796 43.847 2 0.0054699 11604 20230619_1881_Aki_TMTPro18x_K_F2 113.41 6.9964 871230 703900 796940 801820 771480 954450 910520 908670 1105700 988350 1017000 961460 992810 823950 929410 1078900 1093700 972650 804970 645340 815550 803990 808340 952380 916040 933430 1111500 994030 1046200 973000 1011100 867910 956050 1073700 1044000 925390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 864710000 10531 2578 9960 20153;20154;20155 16163 16163 1 9606 Homo sapiens 0.060649354458519156 GLNLTTPGESDGFCANK Unmodified 1779.8098 0.80976297 974 P57737-3;A0A0A6YYL4;P57737;P57737-4;P57737-2;B3KSY4;B3KUH7;B4DKU9;I3L167;B4E0F2;E7EP81 CORO7;CORO7-PAM16;hCG_1787779 Coronin-7;Coronin yes no 0 0 0 6 0 1 54.511 54.588 3 3.4904E-09 15824 20230619_1886_Aki_TMTPro18x_K_F6 127.25 115.98 76557 61924 76332 74151 85504 86684 85339 92789 99678 96936 95991 103960 119580 88940 102200 115210 100830 119830 70783 56799 77674 74078 88036 86868 86526 94440 100640 97945 99746 104720 120370 93696 104240 115570 96620 113690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253530000 10532 974 9961 20156 16164 16164 1 9606 Homo sapiens -0.0489495172680563 GLNSEGLYR Unmodified 1007.5036 0.50360861 1386 P15882;P15882-3;A0A2X0SFY7;Q59EM3;P15882-2;A0A494C1M7;A0A494C0C9;C9J3G1;Q6IBE0;F8W6K2;A0A494C1R0;B8ZZ96;C9J3V9;C9JR98;A0A494C047 CHN1 N-chimaerin yes no 0 0 0 5.5 0.5 1 1 42.043 42.133 2 0.0019729 10384 20230619_1886_Aki_TMTPro18x_K_F6 110.79 55.29 213370 152930 180470 175340 169180 189410 189050 186450 146200 231040 232020 239750 271880 204160 198500 286450 285810 234740 196890 140280 185850 175510 177130 190440 188300 191870 155190 231160 235770 241850 272590 216150 208420 283380 272260 223690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154310000 10533 1386 9962 20157;20158 16165;16166 16166 2 9606 Homo sapiens 0.00015695403772042482 GLNTPEDSDPDHFDTAILFTR Unmodified 2360.0921 0.092069069 2089 A8K6A8;O75173;O75173-2;Q5VTW1 ADAMTS4 A disintegrin and metalloproteinase with thrombospondin motifs 4 yes no 0 0 0 4 0 1 60.486 60.489 3 1.1236E-06 18520 20230619_1883_Aki_TMTPro18x_K_F4 93.73 82.084 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10534 2089 9963 20159 16167 16167 1 9606 Homo sapiens -0.033573282371889945 GLNVQEQLEHTR Unmodified 1422.7215 0.72154031 709 A0A024RC75;O14647-2;O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 yes no 0 0 0 4 0 1 41.671 41.714 3 0.00011156 10277 20230619_1883_Aki_TMTPro18x_K_F4 109.6 91.78 38582 29913 45562 43414 47974 49186 48763 46122 51702 44336 45062 44187 42710 38466 42476 40059 47666 40499 35718 27498 45722 42804 49607 49224 49215 47290 52228 44912 46446 44662 43675 39944 43466 40271 45507 38488 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40490000 10535 709 9964 20160 16168 16168 1 9606 Homo sapiens 0.027088405355470968 GLPDDHAGPIR Unmodified 1146.5782 0.57817054 2406 C9J5N1;B3KSP9;Q9BTE6;Q9BTE6-2;Q9BTE6-3;L7N2F4 PTGES3L-AARSD1;AARSD1 Alanyl-tRNA editing protein Aarsd1 yes no 0 0 0 3.5 0.5 1 1 37.117 37.166 3 5.4647E-09 8438 20230619_1882_Aki_TMTPro18x_K_F3 145.91 99.56 191740 144310 171740 177460 165020 170640 204430 188780 206050 208290 219120 234050 234170 195480 219050 243490 250080 232520 177050 132440 176060 176460 172900 173540 203880 192200 210370 210190 225000 235120 237800 205430 224850 243240 238860 221030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 267560000 10536 2406 9965 20161;20162 16169 16169 1 9606 Homo sapiens 0.010744582151119175 GLPEPSVWWEHAGVR Unmodified 1718.8529 0.85288884 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-5;Q13308-3;Q59FV9;Q86X91;H7C5L0 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 8 0 1 57.017 57.068 3 3.1968E-11 16562 20230619_1888_Aki_TMTPro18x_K_F8 166.03 149.08 43010 45595 44809 46723 41148 53869 47338 42438 52972 56727 57726 52278 62579 52379 56037 59921 64020 70237 39858 41725 45336 47201 43261 53675 47552 44543 53861 56446 59178 53295 63401 54459 57560 60657 61220 66579 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158100000 10537 3847 9966 20163 16170 16170 1 9606 Homo sapiens 0.022216509034706178 GLPFEAENK Unmodified 1003.4975 0.4974606 4096 Q69YJ7;Q9NTZ6;B4DRP9;B3KQH4 DKFZp667H197;RBM12 RNA-binding protein 12 yes no 0 0 0 4.5 0.5 1 1 50.969 51.023 2 3.4406E-05 14198 20230619_1885_Aki_TMTPro18x_K_F5 166.3 110.29 117190 95381 109810 120730 109030 132420 127440 134990 142680 136940 144000 143360 146090 130460 130490 164360 157250 153630 108300 87534 112230 119990 113930 133040 127930 137760 144540 138480 147770 144880 148360 136740 134630 163930 150170 146050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116530000 10538 4096 9967 20164;20165 16171 16171 1 9606 Homo sapiens -0.004148228277699673 GLPFGCSK Unmodified 864.41637 0.41637351 1427;44;1404 Q53F48;A0A024QZK8;P31942-2;P31942;B4DHY1;P31943;G8JLB6;A0A384MEJ3;E9PCY7;D6RBM0;D6RIU0;D6RIT2;D6R9T0;D6RIH9;D6RFM3;E5RGV0;D6RJ04;D6RAM1;D6RDU3;E5RGH4;H0YAQ2;A0A384MDT2;P55795 HNRPH3;HNRNPH3;HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H3;Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 0 0 2 0.816 1 1 1 49.836 49.881 2 0.0010192 14033 20230619_1882_Aki_TMTPro18x_K_F3 150.84 92.176 2291800 1493700 1951400 2312400 2116200 3259900 2594100 2340100 3339400 3236800 2970100 3514500 4114900 3370800 2604000 4533300 4437000 4711900 2113800 1375300 2016800 2277900 2207200 3199800 2609300 2478500 3346800 3233700 3116700 3550500 4093100 3544200 2786300 4540400 4229500 4472500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3466799999.9999995 10539 44;1427;1404 9968 20166;20167;20168 16172;16173 16173 2 9606 Homo sapiens -0.021258020714981285 GLPFGCTK Unmodified 878.43202 0.43202358 470 A0A024R7T3;P52597;B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 0 0 2.5 0.5 1 1 50.285 50.348 2 0.0025474 14575 20230619_1881_Aki_TMTPro18x_K_F2 124.08 88.199 454180 320510 389680 436860 530290 687980 577240 547340 701350 544870 537840 542170 722290 538190 491160 726360 656080 621110 419110 294540 403850 434630 542070 672940 582700 568640 700750 551270 567390 550850 720050 565450 513880 720300 625890 591170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 725930000 10540 470 9969 20169;20170 16174;16175 16174 2 9606 Homo sapiens -0.012055155544544505 GLPLGSAVSSPVLFSPVGR Unmodified 1839.0254 0.025433475 4278 Q8WUM0;B4E206 NUP133 Nuclear pore complex protein Nup133 yes no 0 0 0 5.5 0.5 1 1 63.11 63.157 3 1.1028E-14 19511 20230619_1886_Aki_TMTPro18x_K_F6 157.11 140.76 22628 22198 19410 21455 28071 22561 21421 35833 27076 27067 23302 26097 31467 20523 30157 30029 28061 27594 20925 20309 20113 21774 28245 23065 22193 35398 27148 27763 24468 26353 31750 21884 30571 29887 26865 26236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268460000 10541 4278 9970 20171;20172 16176 16176 1 9606 Homo sapiens 0.13948177520160243 GLPLLVALLDHPR Unmodified 1412.8504 0.85036964 2756 C9JJX6;E9PDC3;O00192-2;O00192;B9EH95 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome yes no 0 0 0 5 0 1 64.243 64.287 3 1.665E-15 19846 20230619_1885_Aki_TMTPro18x_K_F5 197.07 169.97 16565 13728 14653 17665 20664 24617 19647 20269 26446 18652 23177 25730 22354 21369 24493 24137 26147 29208 15303 12600 15156 17598 20992 24257 20072 20962 26397 19171 23920 25653 22963 22324 24959 24495 25023 27677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55948000 10542 2756 9971 20173 16177 16177 1 9606 Homo sapiens 0.16045847236455302 GLPNVQR Unmodified 782.43989 0.43988615 274 V9HW78;B2R5M8;A0A024R3Y6;O75874;Q6FIA4;Q6FI37;Q0QER2;B4DXS4 HEL-216;IDH1 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 5.33 3.09 1 1 1 37.625 37.642 2 0.015996 9037 20230619_1880_Aki_TMTPro18x_K_F1 110.54 38.515 276890 189650 263000 281340 324170 326450 303000 310930 343640 293290 390990 422830 332030 333770 356820 294010 488090 422920 255660 174480 269310 277070 331130 326300 308070 318290 349370 301340 396620 420150 342410 344990 369250 303550 465280 400570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184370000 10543 274 9972 20174;20175;20176 16178;16179 16178 2 9606 Homo sapiens 0.039963797573250304 GLPPPPR Unmodified 732.42826 0.42825883 2020;3876 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 0 7.5 0.5 1 1 37.187 37.212 2 0.035467 8167 20230619_1887_Aki_TMTPro18x_K_F7 92.785 43.379 68794 50491 58657 62046 73751 78405 71883 71561 95956 74479 84219 74860 86627 64193 67839 79586 98900 77799 63493 46342 60673 61925 75405 77891 73310 73644 95857 75178 86970 75665 87416 67427 71081 79597 94181 73990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136340000 10544 2020;3876 9973 20177;20178 16180 16180 1 9606 Homo sapiens 0.051341827339911106 GLPRPDNR Unmodified 923.49371 0.49371263 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 1 7.5 0.5 1 1 30.793 30.849 3 0.016766 5649 20230619_1887_Aki_TMTPro18x_K_F7 71.922 51.021 68149 48594 70761 74526 91777 85766 78459 85648 109010 82520 102990 111250 101590 92054 84921 85625 106870 103400 62985 44718 71978 73252 93233 85877 80840 87410 109000 84485 105920 110940 102990 95226 87857 87161 102020 98031 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22730000 10545 3610 9974 20179;20180 16181;16182 16181 2 9606 Homo sapiens 0.028905521890351338 GLPSTASGR Unmodified 844.44028 0.44028008 544 B4E0G1;A0A024R8X3;H7BYT1;P48730-2;P48730;B4DIJ9;Q59FJ7 CSNK1D Casein kinase I isoform delta yes no 0 0 0 7 0 1 33.842 33.923 2 0.00073332 6891 20230619_1887_Aki_TMTPro18x_K_F7 125.31 55.316 16513 8172 16680 20046 22872 25875 21382 22247 22470 13006 23501 26147 18651 18600 24592 12113 25668 20956 15232 7590.4 17046 19313 23230 25610 21680 22737 22820 14051 23883 25679 19490 19081 24889 12817 24516 19828 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6434000 10546 544 9975 20181 16183 16183 1 9606 Homo sapiens 0.011837546865308468 GLPTGDSPLGPMTHR Oxidation (M) 1550.7511 0.75112588 3146 J3QQZ9;V9HW45;Q53FP0;Q9NVS9-3;Q9NVS9;Q9NVS9-4 PNPO;HEL-S-302 Pyridoxine-5'-phosphate oxidase yes no 0 1 0 7.5 0.5 1 1 41.973 42.007 3 1.4004E-05 10087 20230619_1887_Aki_TMTPro18x_K_F7 106.6 89.661 33148 26010 40461 40819 47007 47495 40968 42128 50670 34215 44788 42750 41612 36040 42952 37177 42997 41006 30699 23933 40585 40073 48106 47388 41969 43203 50776 35296 46081 42801 42637 37453 43622 37580 41125 38915 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44945000 10547 3146 9976 20182;20183 16184 16184 1827 1 9606 Homo sapiens -0.002219635106257556 GLPTGDSPLGPMTHR Unmodified 1534.7562 0.75621126 3146 J3QQZ9;V9HW45;Q53FP0;Q9NVS9-3;Q9NVS9;Q9NVS9-4 PNPO;HEL-S-302 Pyridoxine-5'-phosphate oxidase yes no 0 0 0 8 0 1 46.639 46.688 3 2.7533E-09 12140 20230619_1888_Aki_TMTPro18x_K_F8 149.35 129.58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10548 3146 9976 20184 16185 16185 1 9606 Homo sapiens 0.010223403520058127 GLPTTTQR Unmodified 872.47158 0.4715802 1667 Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;A0A7I2V598;H0Y5F5;Q59GZ7;Q53GL4;Q3B867;Q147Y3;H0Y6X6 PABPC4 Polyadenylate-binding protein 4;Polyadenylate-binding protein yes no 0 0 0 7 0 1 34.475 34.551 2 0.00068735 7119 20230619_1887_Aki_TMTPro18x_K_F7 158.36 58.291 36950 20296 45057 47062 55388 64727 53470 60049 59103 37240 52991 53992 48625 46608 52580 24877 53152 48496 34158 18819 45272 45504 56669 63929 54213 61037 59555 39400 54487 53771 49985 47174 53268 26773 50818 45829 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32393000 10549 1667 9977 20185 16186 16186 1 9606 Homo sapiens 0.030243277206068342 GLPVLVELLQSETDK Unmodified 1639.9033 0.90325265 2756 C9JJX6;E9PDC3;O00192-2;O00192;B9EH95;Q8NAH4 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome yes no 0 0 0 7 0 1 66.257 66.282 3 0.0021696 20617 20230619_1887_Aki_TMTPro18x_K_F7 78.401 62.264 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10550 2756 9978 20186 16187 16187 1 9606 Homo sapiens 0.10889715717939907 GLPVTCEVAPHHLFLSHDDLER Unmodified 2541.2434 0.24344153 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 5.2 0.748 1 2 2 48.863 48.932 4;5 2.6363E-37 13280 20230619_1885_Aki_TMTPro18x_K_F5 219.91 190.14 88564 87210 92982 89616 83106 93380 98389 99107 94009 92369 90287 94678 104890 88786 99892 103040 103220 109580 82031 79828 93922 90432 87480 94312 98222 100670 95903 93768 93510 95822 106350 92552 101860 103680 98768 103990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1630099999.9999998 10551 2980 9979 20187;20188;20189;20190;20191 16188;16189 16188 2 9606 Homo sapiens 0.034469545897081844 GLPWSCSADEVMR Oxidation (M) 1522.6544 0.65444831 1404 A0A384MDT2;P55795;B4DFK9;B4DP00 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes no 0 1 0 4.5 0.5 1 1 51.235 51.286 2 0.0040976 14296 20230619_1885_Aki_TMTPro18x_K_F5 78.513 65.159 61307 52740 67036 67262 75828 85975 85793 75891 82169 85376 84893 85654 97512 65420 82607 101970 93363 108790 56751 48395 67772 66975 78303 85275 85792 78492 84070 85770 87533 86288 98300 70182 84969 102180 89332 103200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102750000 10552 1404 9980 20192;20193 16190;16191 16191 875 2 9606 Homo sapiens -0.08597274062094584 GLPWSCSADEVMR Unmodified 1506.6595 0.65953368 1404 A0A384MDT2;P55795;B4DFK9;B4DP00 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes no 0 0 0 5.5 0.5 1 1 56.245 56.313 2 1.6311E-45 16583 20230619_1886_Aki_TMTPro18x_K_F6 305.56 298.54 137500 119230 133530 138710 123440 165200 178920 171500 178810 169130 154380 160400 184940 154640 157560 195560 188440 188230 127160 109310 135940 138870 130680 165110 177130 174680 181210 170800 160940 163080 186510 161890 162610 195340 180000 178860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 287300000 10553 1404 9980 20194;20195 16192;16193 16193 2 9606 Homo sapiens -0.07352970199485753 GLPWSCSADEVQR Unmodified 1503.6776 0.67762659 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;D6RBM0;D6RIU0;D6RIT2;D6R9T0;D6RIH9;D6RFM3;E5RGV0;D6RJ04;D6RAM1;D6RDU3;E7EN40;E7EQJ0;D6RDL0;D6RF17;D6R9D3 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 0 0 5 0.816 1 1 1 50.859 50.92 2 3.236E-56 14106 20230619_1885_Aki_TMTPro18x_K_F5 320.73 289.31 334600 292670 319050 312730 278030 322270 332250 343690 345710 411890 365730 356000 440290 356860 355320 438540 415320 413390 309410 268090 324750 314530 293610 325750 332450 351370 352700 410790 377460 364030 442870 372530 366570 437740 396780 392910 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1879099999.9999998 10554 1427 9981 20196;20197;20198 16194;16195;16196 16195 3 9606 Homo sapiens -0.05406511953106019 GLPWTLAK Unmodified 884.51199 0.51198846 4122 Q6P587;Q6P587-2;Q6P587-3 FAHD1 Acylpyruvase FAHD1, mitochondrial yes no 0 0 0 4 0 1 59.882 59.884 2 0.0086469 18309 20230619_1883_Aki_TMTPro18x_K_F4 116.9 91.905 72825 57153 62470 69749 72591 89174 80195 82665 102240 72077 67377 69893 80535 65926 66062 86663 84600 85307 67243 52439 64535 69652 74935 88518 81065 84593 101450 73414 71352 70956 81112 69249 68566 86612 80770 81037 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65926000 10555 4122 9982 20199 16197 16197 1 9606 Homo sapiens 0.06511294111044208 GLPYLVNEDDVR Unmodified 1388.6936 0.69359423 4210 Q8IXT5;B9ZVT1 RBM12B RNA-binding protein 12B yes no 0 0 0 3 0 1 55.486 55.527 2 2.2384E-09 16556 20230619_1882_Aki_TMTPro18x_K_F3 181.53 161.74 52318 43269 48979 58926 49504 58063 56020 54146 56410 58782 58545 67035 71273 56630 53640 65113 63024 64388 48355 39738 50105 58185 51577 58672 56127 55737 57567 59401 60570 67296 71475 59218 55435 65228 60220 61158 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93255000 10556 4210 9983 20200 16198 16198 1 9606 Homo sapiens 0.014795175554581874 GLPYSCNEK Unmodified 1066.4753 0.47534495 753 A0A024RD99;B7Z2D8;B7Z5F9;B3KP14;H0Y8R1;B7Z3R7;H0YAK1;B3KW50;Q12849-5;Q12849;H0YAM1 GRSF1 G-rich sequence factor 1 yes no 0 0 0 6.33 0.471 2 1 43.721 43.809 2;3 3.3957E-05 11141 20230619_1886_Aki_TMTPro18x_K_F6 152.34 123.18 172280 125650 161700 169040 183730 191770 185040 191160 226670 201270 222140 210460 240530 186170 196730 244320 249750 223440 159110 115440 165500 167430 189130 192180 187810 195570 228330 203190 228800 212560 242750 195970 203990 243280 238270 212540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 206220000 10557 753 9984 20201;20202;20203 16199;16200 16199 2 9606 Homo sapiens -0.05523370567857455 GLQDVLR Unmodified 799.4552 0.45520186 765;4294 Q59ET3;B2R9K8;A0A024RDL1;P40227;P40227-2;Q92526;Q92526-2;Q92526-3 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 no no 0 0 0 6.5 0.5 1 1 47.417 47.502 2 0.0067262 12773 20230619_1886_Aki_TMTPro18x_K_F6 130.77 35.145 1507600 1334800 1308100 1375800 1444400 1766000 1526000 1518700 1928100 714970 667150 534610 589550 489040 1095200 766040 738490 469570 1393200 1222300 1348100 1391700 1494200 1750400 1545400 1547100 1887300 762670 740650 550880 628530 520330 1083200 749910 708170 450130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1807499999.9999998 10558 765;4294 9985 20204;20205 16201;16202 16201 2 9606 Homo sapiens 0.04745246554523419 GLQEAAEER Unmodified 1001.4778 0.47778779 3237 O15240 VGF Neurosecretory protein VGF;Neuroendocrine regulatory peptide-1;Neuroendocrine regulatory peptide-2;Antimicrobial peptide VGF[554-577] yes yes 0 0 0 1 0 1 35.723 35.723 2 0.00054507 8266 20230619_1880_Aki_TMTPro18x_K_F1 132.01 57.811 68896 43705 68145 64047 13037 15692 44652 48523 58641 89676 60674 53186 110210 50086 39553 95498 74546 54135 63611 40217 68418 62419 18785 20296 43709 48422 59224 87227 64173 55572 107280 54342 43692 92747 70845 51930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79308000 10559 3237 9986 20206 16203 16203 1 9606 Homo sapiens -0.02289198838525408 GLQEFLDR Unmodified 976.49779 0.49779495 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 4.5 0.5 1 1 54.868 54.907 2 0.0080089 15806 20230619_1885_Aki_TMTPro18x_K_F5 105.94 67.099 180780 152170 163550 189780 186220 233220 217590 212710 241670 199400 199730 175600 195880 169020 210380 228650 196080 218240 167060 139610 168140 189090 192740 231970 218240 218340 243040 201620 206640 179320 200750 177730 213000 228170 187900 207320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 145380000 10560 81 9987 20207;20208 16204 16204 1 9606 Homo sapiens 0.008605968920846863 GLQEGYENSR Unmodified 1151.5207 0.52071524 4481 Q9C0C9;K7ES11 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 0 0 0 2.67 0.471 1 2 35.718 35.775 2 1.211E-06 7970 20230619_1881_Aki_TMTPro18x_K_F2 176.6 115.81 104230 72248 84716 88770 103380 104570 91177 89221 129190 120170 152570 151780 146500 133660 126110 137520 183200 153990 96136 66328 87959 88494 105630 104230 93832 93055 130330 120810 155120 152030 148850 138630 131790 139040 174530 146190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141390000 10561 4481 9988 20209;20210;20211 16205;16206 16205 2 9606 Homo sapiens -0.048984287810981186 GLQEVGLPLHR Unmodified 1217.6881 0.68805534 2076 A8K5J1;P11172;B5LY71;P11172-3;B5LY64;B5LY69;P11172-2;B5LY70 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase;Orotidine 5'-phosphate decarboxylase yes no 0 0 0 7.5 0.5 1 1 46.878 46.947 3 1.53E-23 12252 20230619_1888_Aki_TMTPro18x_K_F8 214.67 177.65 130030 99305 117540 122060 104620 130450 109940 118670 143370 135970 128270 137240 133040 118080 131170 155510 129050 135630 120090 91131 120270 121510 110050 130980 111640 122500 143590 136550 132600 138610 135580 124360 133440 154490 123540 129010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 377210000 10562 2076 9989 20212;20213 16207 16207 1 9606 Homo sapiens 0.08791883554317792 GLQHPETQQTFIR Unmodified 1553.795 0.79503961 2613 B4DWF1;Q96DC7;Q96DC7-2 TMCO6 Transmembrane and coiled-coil domain-containing protein 6 yes no 0 0 0 7 0 1 39.507 39.572 3 2.3106E-06 9079 20230619_1887_Aki_TMTPro18x_K_F7 136.82 116.24 22787 19541 19269 21356 22857 27020 29273 32015 35781 25876 27745 30720 28943 23459 31717 30471 29946 30573 21050 17905 19943 21505 23659 27003 29332 32179 35726 26633 28927 30723 29628 24810 32099 30519 28674 29035 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34063000 10563 2613 9990 20214 16208 16208 1 9606 Homo sapiens 0.040293889780059544 GLQHPNIVR Unmodified 1032.5829 0.58286199 2828 Q9H4A3-7;Q9H4A3;D3DUP1;F5GWT4;D3DUP2;Q9H4A3-6;Q9H4A3-2;Q9H4A3-5;F6UYG0;A6PVV2;Q9BYP7-2;H0Y7T5;E9PCD1;Q9BYP7;K7ENT7;Q9BYP7-3;Q9Y3S1-4;Q9Y3S1-2;Q96J92;Q96J92-3;Q9BYP7-4;Q9Y3S1;Q9Y3S1-3 WNK1;WNK2;WNK3;WNK4 Serine/threonine-protein kinase WNK1;Serine/threonine-protein kinase WNK3;Serine/threonine-protein kinase WNK2;Serine/threonine-protein kinase WNK4 yes no 0 0 0 1.5 0.5 1 1 34.035 34.063 3 0.00074908 7598 20230619_1880_Aki_TMTPro18x_K_F1 89.698 41.275 79837 61031 71148 74803 77628 89687 75760 78598 94464 76194 81942 75680 70706 63769 80480 86021 83442 74210 73726 56005 73115 74604 80155 89298 77087 80988 94619 77159 84146 76501 73022 67313 81859 85414 79744 70644 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44134000 10564 2828 9991 20215;20216 16209 16209 1 9606 Homo sapiens 0.06787387148574453 GLQLGQTSTATIQPSQQAQIVTR Unmodified 2425.2925 0.29250021 2499 B4DJ39;O94842-3;O94842-2;O94842;A0A669KB71 TOX4 TOX high mobility group box family member 4 yes no 0 0 0 3 0 1 52.447 52.506 3 1.3527E-44 15254 20230619_1882_Aki_TMTPro18x_K_F3 239.19 209.35 21468 18368 20151 25684 22481 25630 26885 23063 27124 27026 28224 27317 29196 25843 27495 26643 30830 33518 19846 16872 20653 25320 23287 25856 26848 23863 27665 27115 28947 27666 29695 26759 28168 27149 29484 31752 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69773000 10565 2499 9992 20217 16210 16210 1 9606 Homo sapiens 0.13686566150317958 GLQNTMSVR Unmodified 1004.5073 0.50731378 962 A0A0A0MTB8;Q8NI36 WDR36 WD repeat-containing protein 36 yes no 0 0 0 1 0 1 39.642 39.642 2 0.0083522 9937 20230619_1880_Aki_TMTPro18x_K_F1 88.136 57.566 59270 52828 53393 52083 68940 83651 60068 62035 91726 28790 29063 29989 22544 26204 44889 28522 37317 28596 54791 48356 54958 53092 70281 81692 62011 63960 88956 31063 32526 30285 24358 27244 44741 28686 35717 27192 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18295000 10566 962 9993 20218 16211 16211 1 9606 Homo sapiens 0.0052404190596462286 GLQQITGHGGLR Unmodified 1235.6735 0.67346791 4003 Q53HG1;Q9UI09;A0A804HJF8;A0A804HK60;F8VRD8;A0A804HHX9;H0YID5;Q9UI09-2;F8VXI1 NDUFA12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes no 0 0 0 2.5 0.5 1 1 39.93 39.993 3 4.081E-13 9542 20230619_1882_Aki_TMTPro18x_K_F3 176.62 134.51 183930 147180 165680 189230 218140 241910 202350 197140 243440 175450 234170 190200 200810 177350 198930 178200 196010 166710 169910 135100 170750 188250 222120 239560 206180 203930 245000 179120 238930 192170 205930 183350 202030 178540 187370 158570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 172940000 10567 4003 9994 20219;20220 16212;16213 16213 2 9606 Homo sapiens 0.06505811406168505 GLQSFVQCQPFER Unmodified 1594.7562 0.75621126 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H962;B4DGF6 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 4.5 3.5 1 1 56.795 56.823 2;3 1.7529E-16 17152 20230619_1880_Aki_TMTPro18x_K_F1 169.04 155.92 49040 41719 45008 43455 38200 51517 44717 50409 52148 49786 54324 50004 56658 47436 50613 70890 63398 75097 45327 38211 45952 43880 40487 51448 44974 51533 52783 50359 55704 50740 57475 50273 52397 71019 60616 71240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75595000 10568 594 9995 20221;20222 16214;16215 16214 2 9606 Homo sapiens -0.01737659648006229 GLQTSQDAR Unmodified 974.47812 0.47812214 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;B4DHR1 CALR;HEL-S-99n Calreticulin yes no 0 0 0 2 0.816 1 1 1 30.394 30.447 2 8.229E-06 5723 20230619_1882_Aki_TMTPro18x_K_F3 177.3 143.13 18378 6652.9 25593 23020 33773 36808 22855 37598 26642 14951 31045 41634 21284 24505 36069 8833.6 33470 30132 16990 6243.4 25499 22058 34124 36144 23849 37705 27042 17123 31316 40419 22773 24992 36118 10416 32026 28406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 300230000 10569 1691 9996 20223;20224;20225 16216 16216 1 9606 Homo sapiens -0.010137791186707545 GLQTVHINENFAK Unmodified 1469.7627 0.76267685 3859 Q6I9S2;Q13573;G3V3A4;G3V4X8;B7Z9X2;B4DY36;A0A024R6E3;B4DEG7;Q9ULA6 SNW1 SNW domain-containing protein 1 yes no 0 0 0 8 0 1 48.732 48.798 3 3.6799E-11 12997 20230619_1888_Aki_TMTPro18x_K_F8 184.21 154.52 213070 187350 212760 224370 248860 239100 230650 224860 235000 220150 258270 219110 215970 181960 281760 237390 212370 221020 197110 171790 216710 223760 254830 240460 233820 230620 240030 222720 261930 221430 224770 191840 281300 236910 203920 210070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 315270000 10570 3859 9997 20226 16217 16217 1 9606 Homo sapiens 0.04658601575033572 GLQVGGCEPEPQVC Unmodified 1528.665 0.66501299 3637 Q9BW75;Q96CV8;P52888;K7EP46;B4DU96;K7EL02;P52888-2 THOP1 Thimet oligopeptidase yes no 0 0 0 2.5 0.5 1 1 52.388 52.437 2 3.4122E-06 15497 20230619_1881_Aki_TMTPro18x_K_F2 125.97 118.75 53029 43447 56253 57849 51431 63223 55937 60875 68420 75055 70389 78731 95959 77882 66185 99865 92495 93963 49060 39893 56817 57305 53984 63447 56561 62716 69151 75205 73271 79744 95711 81537 69462 99568 88254 89304 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 50566000 10571 3637 9998 20227;20228 16218;16219 16218 2 9606 Homo sapiens -0.07817291407627636 GLSAEPGWQAK Unmodified 1142.572 0.57202253 3428 P10645 CHGA Chromogranin-A;Vasostatin-1;Vasostatin-2;EA-92;ES-43;Pancreastatin;SS-18;WA-8;WE-14;LF-19;Catestatin;AL-11;GV-19;GR-44;ER-37;GE-25;Serpinin-RRG;Serpinin;p-Glu serpinin precursor yes yes 0 0 0 6.5 0.5 1 1 48.78 48.862 3 2.3526E-06 13053 20230619_1887_Aki_TMTPro18x_K_F7 151.22 132.12 163180 145980 182870 288090 136140 157900 227760 226760 204560 250870 211970 173420 240750 189910 170140 214590 238290 173610 151130 134690 184110 277220 147430 170910 223650 227720 210240 249730 218080 180190 241390 196760 178220 212860 226880 165570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157870000 10572 3428 9999 20229;20230 16220 16220 1 9606 Homo sapiens 0.006439399836153825 GLSEDTTEETLK Unmodified 1321.6249 0.62490554 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V699;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 0 2 0.756 2 3 2 47.309 47.361 2;3 2.8511999999999997E-40 13198 20230619_1881_Aki_TMTPro18x_K_F2 303.26 197.4 380260 315210 344810 354760 407250 404530 411410 405170 489960 452480 503390 484000 549690 432830 468870 571620 547050 511160 351370 288930 354170 355820 418000 405520 417000 415120 495190 455800 517670 488510 555530 455540 483070 568530 522410 486270 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 15606000000 10573 1658 10000 20231;20232;20233;20234;20235;20236;20237 16221;16222;16223;16224 16222 4 9606 Homo sapiens -0.023041915349267583 GLSEDVSISK Unmodified 1033.5292 0.52915466 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;K7EP67 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 4.5 0.5 1 1 48.893 48.931 2;3 9.9218E-07 13487 20230619_1883_Aki_TMTPro18x_K_F4 179.8 108.3 180860 139120 163310 197950 186430 207380 185640 197810 226760 239880 251690 255760 263670 214960 202000 276320 275560 256780 167040 127860 167910 195090 191910 208720 188550 203860 229790 240630 257520 257560 265790 226320 210960 275380 262810 244170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 240900000 10574 2436 10001 20238;20239 16225;16226 16225 2 9606 Homo sapiens 0.013731251355238783 GLSFLEVK Unmodified 891.50657 0.50656873 1859 H0YJQ1;A0A8V8TRJ3;Q8NEJ9-2;Q8NEJ9;H0YJ17;A0A8V8TQS3;G3V4G1 NGDN Neuroguidin yes no 0 0 0 1 0 1 60.579 60.579 2 0.0015813 18731 20230619_1880_Aki_TMTPro18x_K_F1 155 100.59 78568 56839 65793 81095 61361 108980 65698 75942 114690 100710 86590 107720 117440 103680 77943 147070 136020 138120 72500 52256 67964 80187 64673 107190 67515 80495 112970 100760 91594 108910 117120 109340 83540 146370 129600 131280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42834000 10575 1859 10002 20240 16227 16227 1 9606 Homo sapiens 0.05647570528572032 GLSFLFPLLK Unmodified 1133.6849 0.68486744 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;Q2TU89;Q3LIE0 EIF4G2;AAG1;Nbla00315 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 7.5 0.5 1 1 66.565 66.586 3 0.00044918 20554 20230619_1888_Aki_TMTPro18x_K_F8 107.15 75.782 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10576 3752 10003 20241;20242 16228;16229 16229 2 9606 Homo sapiens 0.12337240447595832 GLSFSEATASNLVK Unmodified 1422.7355 0.73545904 4022 Q59EK1;Q5VU08;Q9UEY8-2;Q9UEY8;Q53FL4 ADD3 Gamma-adducin yes no 0 0 0 8 0 1 57.669 57.721 3 9.2252E-07 16869 20230619_1888_Aki_TMTPro18x_K_F8 126.83 105.88 53394 43955 46381 35584 45071 47734 40140 51072 30726 40999 51264 46099 63544 37334 53352 46589 54631 58328 49320 40188 47599 36865 46766 47467 40550 51625 32706 42079 52138 46313 63846 39387 54462 47342 52284 55263 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126060000 10577 4022 10004 20243 16230 16230 1 9606 Homo sapiens 0.04100073243967017 GLSHSPWAVK Unmodified 1080.5716 0.5716286 4376 V9HWH0;Q96KB5;Q96KB5-2;E5RFX4 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase yes no 0 0 0 3 0 1 45.139 45.215 3 1.8627E-05 11937 20230619_1882_Aki_TMTPro18x_K_F3 144.77 119.92 198370 161770 166230 175540 164650 225240 177200 161090 229130 131110 117210 104170 129840 94703 139840 121120 115020 106770 183180 148250 171610 176800 172010 222450 179450 168260 225760 133570 126030 106720 132500 99481 140540 120560 110230 101590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196350000 10578 4376 10005 20244 16231 16231 1 9606 Homo sapiens 0.03456565054420935 GLSNLFLSCPIPK Unmodified 1444.7748 0.77482144 1224 A0A140VK39;Q9Y570;Q9Y570-4;Q9Y570-2;Q9Y570-3 PPME1 Protein phosphatase methylesterase 1 yes no 0 0 0 4.5 0.5 1 1 62.898 62.925 3 8.4429E-08 19260 20230619_1885_Aki_TMTPro18x_K_F5 136.27 118.2 207250 174040 212620 209690 164320 224340 218510 233670 225160 281620 209110 232620 289780 238670 184100 286990 270190 280680 191710 159630 214850 209100 176240 225860 217510 239250 228820 280450 218900 238460 288200 248650 194380 286960 257760 266620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 482110000 10579 1224 10006 20245;20246 16232 16232 1 9606 Homo sapiens 0.0702250199383343 GLSNPSEVEVLR Unmodified 1298.683 0.68302954 1033 Q06310;B7Z7J5;Q5STP9;A0A0S2Z4M5;J3JS71;A0A0G2JKR7;P28702-3;A0A0S2Z570;P28702 RXRB Retinoic acid receptor RXR-beta yes no 0 0 0 4 0 1 48.798 48.836 2 0.0048717 13465 20230619_1883_Aki_TMTPro18x_K_F4 84.309 58.37 51144 44899 45855 53648 49334 60994 52877 61558 67688 61440 65787 72278 71867 63654 62388 77787 75519 81664 47273 41170 47129 53556 51152 61116 53588 62820 68032 62435 67889 72600 72737 66679 64419 78111 72172 77502 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38646000 10580 1033 10007 20247 16233 16233 1 9606 Homo sapiens 0.04563534901035382 GLSQSALPYR Unmodified 1090.5771 0.57710791 3712 P62277;J3KMX5;E9PS50 RPS13 40S ribosomal protein S13 yes no 0 0 0 1.5 0.5 1 1 44.813 44.855 2 4.8227E-05 12237 20230619_1880_Aki_TMTPro18x_K_F1 145.84 88.736 2606400 2389900 2262800 2312200 2997500 4142600 3072200 2710000 4227700 937630 727790 707090 754680 709770 1469300 944440 1076900 712230 2409300 2187100 2340000 2365600 3066900 4015500 3124400 2820300 4091600 1043900 914040 730200 805540 744020 1456800 934120 1031700 680270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1822899999.9999998 10581 3712 10008 20248;20249 16234;16235 16234 2 9606 Homo sapiens 0.03544243846226891 GLSQSALPYRR Unmodified 1246.6782 0.67821894 3712 P62277;J3KMX5;E9PS50 RPS13 40S ribosomal protein S13 yes no 0 0 1 6 0.816 1 1 1 38.543 38.622 3 0.00020893 8985 20230619_1885_Aki_TMTPro18x_K_F5 112.94 76.994 50286 70037 53667 44395 83559 64556 60561 70365 72408 32125 35677 32272 37652 29809 38074 36658 41053 33024 46728 63844 54589 47343 83598 64042 62763 70402 71538 34577 38407 32732 38393 31198 38861 36533 39195 31434 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90890000 10582 3712 10009 20250;20251;20252 16236 16236 1 9606 Homo sapiens 0.0647469554894542 GLSSDLEGEK Unmodified 1033.4928 0.49276916 3790 Q02952-3;Q02952-2;Q02952 AKAP12 A-kinase anchor protein 12 yes no 0 0 0 2 0 1 46.238 46.318 2 1.9878E-11 12737 20230619_1881_Aki_TMTPro18x_K_F2 206.43 155.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10583 3790 10010 20253 16237 16237 1 9606 Homo sapiens -0.022637517611883595 GLSSDNKPMVNLDK Oxidation (M) 1532.7505 0.75045718 3766 P82979;Q567R9;H0YHG0;F8VZQ9 SARNP;CIP29 SAP domain-containing ribonucleoprotein yes no 0 1 1 8 0 1 46.7 46.749 3 0.014191 12176 20230619_1888_Aki_TMTPro18x_K_F8 67.136 51.245 130450 106180 108280 132460 147990 133290 133940 131200 149400 147640 167720 143950 159580 115660 147510 157190 138560 135450 120450 97431 112530 131590 150030 134770 136350 134650 152070 148200 170690 145450 162380 122500 149770 156060 132640 128900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179540000 10584 3766 10011 20254 16238 16238 2451 1 9606 Homo sapiens 0.005391970496702925 GLSSDNKPMVNLDK Unmodified 1516.7555 0.75554256 3766 P82979;Q567R9;H0YHG0;F8VZQ9 SARNP;CIP29 SAP domain-containing ribonucleoprotein yes no 0 0 1 8 0 1 49.065 49.134 3 0.0016645 13200 20230619_1888_Aki_TMTPro18x_K_F8 86.944 68.58 72212 63906 79409 76013 58130 78794 71920 71928 84915 91231 96073 95088 96334 75576 74756 106080 81518 90978 66861 58595 79738 75829 62546 79287 72175 74485 86236 91270 98017 95718 97232 80215 76952 105170 77996 86536 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 880840000 10585 3766 10011 20255 16239 16239 1 9606 Homo sapiens 0.017835009123018608 GLSSLLCNFTK Unmodified 1238.6329 0.63290823 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4.67 0.471 1 2 62.982 63.016 2;3 2.0137E-08 19302 20230619_1885_Aki_TMTPro18x_K_F5 207.6 176.52 386230 358500 382350 406460 386240 425690 451990 450210 479920 314380 249000 206830 266820 204010 277060 280440 273870 226590 357410 328500 388970 406950 402590 429620 452650 454590 477770 321970 266960 215010 272210 214710 281370 277580 261740 215960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1276200000 10586 3758 10012 20256;20257;20258 16240;16241 16241 2 9606 Homo sapiens 0.023137089715191905 GLSTFPGAEHCLR Unmodified 1443.6929 0.69288272 2309 B2RD09;Q96P11-2;Q96P11;Q96P11-4;Q96P11-5;Q63ZY6-5;Q63ZY6-6;Q63ZY6;B3KSU5;Q63ZY6-4;Q3KNT7-2;Q3KNT7-3;Q3KNT7 NSUN5;NSUN5P2;NSUN5P1 Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative methyltransferase NSUN5C;Putative NOL1/NOP2/Sun domain family member 5B yes no 0 0 0 8 0 1 43.749 43.759 3 7.0481E-08 10995 20230619_1888_Aki_TMTPro18x_K_F8 152.4 138.43 40008 34938 34781 38580 38081 44152 48877 42679 45617 56201 55587 55444 61126 50169 52286 53353 54231 56329 36970 32013 35852 38745 39591 44198 48540 44074 47104 56033 56806 56119 61766 52110 53436 53735 51883 53462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36787000 10587 2309 10013 20259 16242 16242 1 9606 Homo sapiens -0.01121600365240738 GLSVLAGESK Unmodified 959.52876 0.52876073 4804 yes yes 0 0 0 7 0 2 51.135 51.212 2 0.013802 14140 20230619_1887_Aki_TMTPro18x_K_F7 72.485 44.96 + 172510 142210 136310 153740 170890 313060 157490 154090 363470 151960 163590 158440 178930 150650 175620 191010 184860 181790 159250 130300 142250 156250 175970 300510 165680 168280 349940 154600 177820 160410 182090 157780 179230 190740 176760 172770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150280000 10588 4804 10014 20260;20261 16243 16243 1 9606 Homo sapiens 0.04737750206345481 GLTAYHDISLDK Unmodified 1331.6721 0.67213051 2753 C9JG41;Q9NQX7;F5H4I5;E7EUS6;B8ZZM6;Q9NQX7-2 ITM2C Integral membrane protein 2C;CT-BRI3 yes no 0 0 0 6.5 0.5 1 1 49.734 49.815 3 3.8426E-13 13821 20230619_1886_Aki_TMTPro18x_K_F6 172.09 140.03 96511 76721 91425 101020 79335 85940 93900 88380 102680 110180 110960 105440 117450 94282 94479 120470 119240 124910 89186 70445 93164 99818 83753 88113 94135 90757 104480 110030 113680 106910 118550 99054 97989 120810 113890 118570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58998000 10589 2753 10015 20262;20263 16244 16244 1 9606 Homo sapiens 0.01956132526743204 GLTDLSACK Unmodified 963.46953 0.46953129 2138 A8K9K6;O00567;A0PJ92;A0A494C128;Q5JXT2 NOP56 Nucleolar protein 56 yes no 0 0 0 6.5 0.5 1 1 48.334 48.416 2;3 1.7782E-10 13202 20230619_1886_Aki_TMTPro18x_K_F6 164.57 120.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10590 2138 10016 20264;20265 16245;16246 16245 2 9606 Homo sapiens -0.013664690794939816 GLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSR Unmodified 3518.6174 0.61743295 3372 V9HWC9;P00441;H7BYH4 HEL-S-44;SOD1 Superoxide dismutase [Cu-Zn] yes no 0 0 0 8 0 1 50.635 50.711 6 7.8221E-16 13819 20230619_1888_Aki_TMTPro18x_K_F8 131.81 126.8 456650 253840 341190 447390 343630 408230 344580 442380 415540 402210 450400 508780 598630 414810 481660 547360 645400 801540 420520 234310 356830 435000 357430 416160 349960 448410 420840 411730 467290 508600 600220 438840 501260 561740 617010 758040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2050099999.9999998 10591 3372 10017 20266 16247;16248;16249 16248 3 9606 Homo sapiens -0.041131065659101296 GLTLAQGGVK Unmodified 942.54983 0.54983053 1277 A0A1B0GVU9;A0A0U1RR79 yes no 0 0 0 4.5 2.63 1 1 1 1 1 1 29.861 29.913 3 0.011942 5978 20230619_1880_Aki_TMTPro18x_K_F1 67.334 11.076 374940 172150 526640 469980 773500 796790 566110 753050 564410 253580 464060 467310 325130 352430 605250 132630 506100 397650 346910 160330 525630 453950 777390 779170 583320 758200 569920 289780 475390 460780 350010 355610 602340 153270 484440 375280 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2154000000 10592 1277 10018 20267;20268;20269;20270;20271;20272 16250;16251;16252;16253 16250 4 9606 Homo sapiens 0.07625760305870699 GLTMLDHEQVTPEDPGAQFLIR Oxidation (M) 2482.2162 0.21622373 107 A0A024R0R4;Q9UBE0;M0QZS6;B3KNJ4;Q9UBE0-2;Q9UBE0-3;A0A590UK93;A0A590UKC5;M0QX65;A0A590UKA0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes no 0 1 0 4.5 0.5 1 1 57.965 57.995 3 5.3497E-17 17071 20230619_1885_Aki_TMTPro18x_K_F5 147.49 132.23 19669 22795 19528 23161 22673 20006 22793 23927 22640 23135 25491 23125 25107 21229 23313 28781 23994 30650 18233 20853 19912 23333 23259 20587 22978 24154 23192 23414 25989 23437 25548 22367 23809 28886 22997 29068 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60782000 10593 107 10019 20273;20274 16254 16254 44 1 9606 Homo sapiens 0.034404262586576806 GLTPSQIGVILR Unmodified 1252.7503 0.75032125 3712 P62277;J3KMX5 RPS13 40S ribosomal protein S13 yes no 0 0 0 4.5 0.5 1 1 58.952 58.981 2 4.3406E-08 17426 20230619_1885_Aki_TMTPro18x_K_F5 181.53 143.4 372810 308840 329740 378320 306590 407170 361960 377790 500110 469410 391060 445520 505360 446390 321070 564580 576340 624720 344420 283320 338570 376690 322680 408720 366000 390380 497550 468960 411470 453340 503870 466790 345170 567990 549300 592550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9137100000 10594 3712 10020 20275;20276 16255;16256 16256 2 9606 Homo sapiens 0.13405609902679316 GLTPTGMLPSGVLSGGK Oxidation (M) 1586.8338 0.83379288 1092 A0A0S2Z4B5;Q08209;A0A0S2Z4C6;Q08209-2;Q08209-3;E7ETC2;Q08209-5;Q9UMM5;Q08209-4 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase yes no 0 1 0 3 0 1 56.593 56.63 3 1.6564E-06 17036 20230619_1882_Aki_TMTPro18x_K_F3 109.14 88.759 52270 42476 50510 50532 49945 48886 49824 52935 63329 60870 56461 55065 66555 48170 52690 67725 58960 71038 48317 38958 51433 50370 51896 49679 50682 54002 63508 60915 58670 55949 66895 51007 54257 67874 56436 67393 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 299050000 10595 1092 10021 20277 16257 16257 666 1 9606 Homo sapiens 0.06384933497520251 GLTPTGMLPSGVLSGGK Unmodified 1570.8389 0.83887826 1092 A0A0S2Z4B5;Q08209;A0A0S2Z4C6;Q08209-2;Q08209-3;E7ETC2;Q08209-5;Q9UMM5;Q08209-4 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase yes no 0 0 0 4 0 1 61.398 61.401 3 5.2225E-10 18902 20230619_1883_Aki_TMTPro18x_K_F4 142.91 138.48 75361 62264 71640 73686 53940 70230 71839 76482 84058 90674 76361 90277 93071 80814 88220 104790 91335 105010 69660 57100 72840 73460 58015 71408 71810 78075 84710 90843 79552 91309 94249 84940 90062 104880 87453 99686 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143470000 10596 1092 10021 20278 16258 16258 1 9606 Homo sapiens 0.07629237360129082 GLTSAGR Unmodified 660.35549 0.35548781 210 A0A024R2Q4;P61313;A0A2R8YEM3;E7EQV9;E7ENU7;B4DLP4;E7ERA2 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 0 0 0 6 1.41 1 1 1 1 1 30.292 30.35 2 0.0074515 5831 20230619_1885_Aki_TMTPro18x_K_F5 125.08 4.1873 168350 98541 236360 232680 339020 309740 250390 329820 232260 113920 195630 210300 146620 159170 229530 68004 223930 164220 155910 91373 235870 224770 340850 307640 257300 329540 235770 129650 200600 207340 155380 160960 230700 75764 213900 155180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 117530000 10597 210 10022 20279;20280;20281;20282;20283 16259;16260;16261 16259 3 9606 Homo sapiens 0.011724289405606214 GLTSVINQK Unmodified 958.54475 0.54474515 1577 P07195;Q5U077;A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 2 0.816 1 1 1 49.27 49.3 3 2.9572E-06 13816 20230619_1882_Aki_TMTPro18x_K_F3 133.23 86.773 417200 353190 355040 376680 427800 662700 399020 387910 770190 393470 410130 426770 485210 409560 432450 520920 539440 470610 385380 323560 367270 382070 440330 641690 415040 415330 748110 399640 440990 431390 490630 428840 447030 518630 514620 447770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4188099999.9999995 10598 1577 10023 20284;20285;20286 16262;16263;16264 16264 3 9606 Homo sapiens 0.06381456443239131 GLTTRPGSGLTNIK Unmodified 1413.794 0.79397698 1165 A0A218KGR2;P05067;P05067-8;P05067-11;E9PG40;A0A140VJC8;P05067-4;A0A0A0MRG2;P05067-6;P05067-10;B4DGD0;B4DJT9;B4DQM1;B4DM00;B4DMD5;B7Z313 APP Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes no 0 0 1 5 0 1 44.257 44.336 3 1.3499E-06 11334 20230619_1885_Aki_TMTPro18x_K_F5 125.32 100.75 114300 107290 112880 113430 106570 117660 115940 106350 118760 119620 108570 100120 120490 97058 115540 155010 121170 102800 105770 98244 114680 114160 111430 118450 116460 109820 120490 119610 112370 102550 122340 103240 118100 151800 115750 98261 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120440000 10599 1165 10024 20287 16265 16265 1 9606 Homo sapiens 0.10363174609142334 GLTTTGNSSLNSTSNTK Unmodified 1681.8119 0.81187146 2331 B2RNR6;Q96KR1;A8K849 ZFR Zinc finger RNA-binding protein yes no 0 0 0 1 0 1 41.776 41.776 3 1.7148E-18 10877 20230619_1880_Aki_TMTPro18x_K_F1 180.56 168.87 27802 21858 31913 37236 40389 43485 38135 38092 48907 40526 51236 56115 48784 47069 47489 35757 63461 51576 25733 20134 32236 36386 41217 43353 38913 39363 49270 41323 52384 55906 49858 48240 49120 37048 60482 48863 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84136000 10600 2331 10025 20288 16266 16266 1 9606 Homo sapiens -0.0017619971731619444 GLTVPIASIDIPSGWDVEK Unmodified 1996.0517 0.051707805 2564 B4DP80;Q8NCW5;Q8NCW5-2 APOA1BP NAD(P)H-hydrate epimerase yes no 0 0 0 7 0 1 64.317 64.346 3 3.1975E-10 19839 20230619_1887_Aki_TMTPro18x_K_F7 126.19 110.42 21166 19118 20686 22799 16737 24440 19883 19776 24433 27213 27405 24324 24444 22774 26667 32680 31499 36832 19580 17528 21012 22740 17837 24472 20017 20727 24761 27019 27831 24794 25168 24071 27380 32888 30128 34920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233930000 10601 2564 10026 20289 16267 16267 1 9606 Homo sapiens 0.09352401900969198 GLTVQQWDALYTDLPNR Unmodified 1988.9956 0.99558991 1553 O95394-4;J3KN95;H0Y987;A0A8V8TMH7;B3KN28;A0A8V8TLT8;A0A494C1Q4;A0A8V8TNH4;A0A494C1E2;A0A8V8TMI1;O95394;O95394-3;A0A8V8TM25;A0A8V8TNM1 PGM3 Phosphoacetylglucosamine mutase yes no 0 0 0 7.5 0.5 1 1 62.674 62.705 3 3.1489E-06 19047 20230619_1887_Aki_TMTPro18x_K_F7 103.5 93.92 56509 59459 67617 66532 57606 76965 61155 57195 61076 72855 76481 78174 78136 77744 72182 85438 69679 83197 52431 54455 67616 66754 60789 76572 61502 60243 62897 72961 77835 79109 79470 80557 73448 85579 66787 78995 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212950000 10602 1553 10027 20290;20291 16268 16268 1 9606 Homo sapiens 0.040651937841857944 GLVAVITGGASGLGLATAER Unmodified 1812.0105 0.010511692 1085 A0A0S2Z410;Q99714;A0A804HHW5;Q99714-2;Q5H928;A0A0S2Z434 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 4 0 1 63.77 63.778 3 3.625E-23 19919 20230619_1883_Aki_TMTPro18x_K_F4 191.43 179.26 43014 34251 39408 43877 33930 42038 44500 47914 47628 56458 63460 53671 61857 52936 53961 56024 56978 63702 39739 31440 40284 43500 36002 42770 44382 48759 48991 56494 64221 54617 62795 54813 55190 56677 54534 60398 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54281000 10603 1085 10028 20292 16269 16269 1 9606 Homo sapiens 0.13698685652184395 GLVCEER Unmodified 861.40145 0.40145173 2673 H0Y6A7;Q5TE61;B7Z1I3;B7Z5P3;Q96MZ0;Q96MZ0-4;A0A087WWT8;Q71U71;Q71U70;Q96MZ0-2 GDAP1L1 Ganglioside-induced differentiation-associated protein 1-like 1 yes no 0 0 0 2 0 1 35.238 35.295 2 0.010474 7775 20230619_1881_Aki_TMTPro18x_K_F2 117.93 73.487 80545 57159 71717 65288 19062 17148 47845 44215 49952 77252 98193 107160 96789 88035 96544 77491 121530 109680 74348 52433 72730 64716 24727 21672 46750 44279 52720 77128 98486 106690 98855 90886 99437 79914 115960 103880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65453000 10604 2673 10029 20293 16270 16270 1 9606 Homo sapiens -0.0347929393949471 GLVEEYVEK Unmodified 1064.539 0.53899107 535 I3L2L5;A0A024R8R5;I3L317;I3L4Q0;C9JLW8 FAM195B;hCG_1818442 Protein FAM195B yes no 0 0 0 3.5 0.5 1 1 53.948 53.982 3 0.00033436 15794 20230619_1883_Aki_TMTPro18x_K_F4 118.18 57.349 130330 112670 122240 122920 111630 129430 132110 140430 147100 141070 149260 135180 142570 125820 139790 147110 147350 152140 120490 103240 124700 123460 117420 130660 132540 142680 149070 142350 152660 137250 145620 131220 142660 147760 140940 144440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 182470000 10605 535 10030 20294;20295 16271;16272 16272 2 9606 Homo sapiens 0.009303131409069465 GLVEGASVK Unmodified 858.48108 0.48108226 2830 D3DVC4;P48681;Q9H6U9 NES Nestin yes no 0 0 0 7 0 1 44.7 44.785 2 0.0075759 11222 20230619_1887_Aki_TMTPro18x_K_F7 89.542 40.217 48012 42100 46106 51654 54032 68936 68072 72303 100190 76314 69781 68773 84898 66420 66953 82377 75133 67471 44400 38614 47177 51610 56004 68440 68766 73688 98980 76739 73656 70097 85294 69447 68931 81654 71754 64270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59567000 10606 2830 10031 20296 16273 16273 1 9606 Homo sapiens 0.04618096006151973 GLVEPVDVVDNADGTQTVNYVPSR Unmodified 2543.2504 0.25036063 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 0 0 4 0.816 1 1 1 59.697 59.725 3 5.1598E-76 18314 20230619_1882_Aki_TMTPro18x_K_F3 314.48 287.43 54581 46193 54891 50470 52762 70434 65699 62210 71955 66618 65702 71994 70647 63290 65165 75981 73973 77938 50483 42327 55699 50905 55412 69498 65678 64230 72696 67271 67971 72537 71720 66230 66908 76230 70719 73991 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 498670000 10607 3484 10032 20297;20298;20299 16274;16275;16276 16274 3 9606 Homo sapiens 0.04046545951223379 GLVGEIIK Unmodified 827.51165 0.5116541 3490;1446 A0A384MTW7;P15531;P15531-2;E7ERL0;E5RHP0;C9K028;Q32Q12;P22392-2;J3KPD9;Q6FHN3;P22392;F6XY72 NME1;NME1-NME2;NME2 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 0 0 4 2.55 2 1 1 1 1 1 1 55.848 55.881 2;3 0.00086606 16375 20230619_1886_Aki_TMTPro18x_K_F6 154.31 58.687 2711100 2369600 1822000 2622700 2035700 2675300 2317200 2565600 2937600 2852700 2676600 4067100 1718000 3992600 961060 5437900 924700 3213800 2501100 2171300 1933300 2628100 2111900 2698400 2339300 2636800 2946800 2905400 2724100 4071300 1705300 4180000 1015400 5304000 900950 3067700 6 6 6 6 6 6 6 6 6 6 6 6 5 6 6 6 6 6 12093000000 10608 1446;3490 10033 20300;20301;20302;20303;20304;20305;20306;20307 16277;16278;16279;16280;16281;16282 16279 6 9606 Homo sapiens 0.09099874391176854 GLVGNPLPSVR Unmodified 1107.64 0.64004252 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;B4E263;A2VDI1;B3KWS1;Q8N7L7;B7ZAU8 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 2.5 0.5 1 1 50.441 50.504 2 0.00088771 14352 20230619_1882_Aki_TMTPro18x_K_F3 106.88 81.323 114090 89309 102150 119560 111660 144910 130670 115440 145880 124860 120410 112820 133760 108200 121680 150180 142690 135430 105380 82022 105050 118520 115950 143850 131050 120260 146710 125400 125280 115020 135520 114010 125260 149330 136270 128820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 224450000 10609 2332 10034 20308;20309 16283 16283 1 9606 Homo sapiens 0.09052809634295045 GLVGPELHDR Unmodified 1091.5724 0.57235688 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0;Q96IE3 PLEC;PLEC1 Plectin yes no 0 0 0 3.5 0.5 1 1 38.392 38.44 3 3.4108E-05 8916 20230619_1882_Aki_TMTPro18x_K_F3 141.95 102.93 105620 79968 91098 89550 137000 142140 114320 118260 163600 88515 104990 104500 103370 88226 107340 86510 116540 103530 97505 73323 94416 90354 138120 139220 118040 121610 161310 91709 110410 104820 105780 91469 109460 87996 111330 98200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76703000 10610 3921 10035 20310;20311 16284;16285 16284 2 9606 Homo sapiens 0.03023359703456663 GLVHAAGPGQDSGSQAGSPPTR Unmodified 2045.9879 0.98787877 4344 Q96ER9;A0A024R2V4;Q96ER9-2 CCDC51 Coiled-coil domain-containing protein 51 yes no 0 0 0 6 0 1 35.036 35.09 3 4.5355E-13 7619 20230619_1886_Aki_TMTPro18x_K_F6 143.52 131.6 4225.3 4718.4 4285.5 4564.3 5857.5 5089.7 5608.3 7035.5 5591.9 5830.4 6479.6 5891.3 4806.1 9680.4 7068.6 7745.7 6413.3 7042.3 3916.3 4315.3 4372.5 4634.8 5940.4 5157.2 5672.5 7014 5733.5 5960.3 6534.2 6114.1 5103.4 9731.5 7116.4 7776.9 6146.9 6694 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14453000 10611 4344 10036 20312 16286 16286 1 9606 Homo sapiens 0.006724345166048806 GLVLDHGAR Unmodified 936.51411 0.51411372 765;2549 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2;B4DN39 CCT6A T-complex protein 1 subunit zeta no no 0 0 0 6 1.41 1 1 1 1 1 35.231 35.282 3 1.2011E-06 7701 20230619_1886_Aki_TMTPro18x_K_F6 185.58 136.83 348470 278270 331970 352230 370600 388140 380890 370930 428960 430620 531410 551130 537640 454320 443180 492530 582590 527520 322050 255390 339270 350100 382060 389430 385030 381820 438290 435640 540690 550690 544080 473820 460250 496210 555690 500870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3132999999.9999995 10612 765;2549 10037 20313;20314;20315;20316;20317 16287;16288;16289 16288 3 9606 Homo sapiens 0.0433172284884904 GLVLMSR Unmodified 774.44219 0.44219433 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2;A0A7P0Z484;A0A7P0TAR9;A0A7P0Z4H2;Q6ZP56;D6RFL1;A0A7P0TAN9;A0A7P0T8N1;D6RAU8 CANX Calnexin yes no 0 0 0 3 0 1 48.056 48.135 2 0.076134 13148 20230619_1882_Aki_TMTPro18x_K_F3 74.423 37.957 216320 214460 190090 184150 355140 719960 273910 295160 857430 117600 107090 124910 137510 110670 156000 142790 143260 129000 200090 196040 198170 195190 357660 676690 298000 325640 808100 130760 146430 126140 140620 116330 157520 142260 137100 122720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150550000 10613 1700 10038 20318 16290 16290 1 9606 Homo sapiens 0.04595092170779935 GLVPEDDTK Unmodified 972.47639 0.47639081 146 A0A024R1K8;Q15459;Q15459-2;B4E091;H7C1L2 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 2 0.816 1 1 1 45.203 45.256 2 0.00037392 12216 20230619_1881_Aki_TMTPro18x_K_F2 138.1 94.851 382900 308350 416100 436360 480350 484900 510320 476040 527470 440780 578090 527530 535040 410720 540740 521850 582030 564710 354280 283340 421010 430690 494110 486430 513310 486150 537910 450060 588600 528050 547390 433600 551920 525080 556360 535970 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 414440000 10614 146 10039 20319;20320;20321 16291;16292;16293 16292 3 9606 Homo sapiens -0.010948329272764568 GLVQALQTK Unmodified 956.56548 0.56548059 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 2.5 0.5 1 1 52.741 52.787 3 2.1913E-05 15283 20230619_1882_Aki_TMTPro18x_K_F3 159.28 104.74 841880 719380 799050 735240 594710 711720 686550 664550 755880 827460 860270 767750 893990 704430 746230 1046500 955970 797190 778350 658770 811720 741540 636980 720760 689670 686740 770640 825650 878430 780810 904120 746730 774610 1031300 911540 760400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1063599999.9999999 10615 3606 10040 20322;20323 16294 16294 1 9606 Homo sapiens 0.08546046822880271 GLVRPGSSR Unmodified 927.52501 0.52501276 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 1 4 0.816 1 1 1 28.479 28.565 3 0.0015909 5038 20230619_1883_Aki_TMTPro18x_K_F4 92.051 53.089 44317 38825 48406 52530 62215 70472 57734 63053 80416 47106 60196 53623 47255 40124 54541 50743 64968 45748 41028 35646 49070 52140 63453 69704 59164 64477 79699 48721 62107 53731 49010 42379 55879 50562 61927 43575 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59171000 10616 3610 10041 20324;20325;20326 16295 16295 1 9606 Homo sapiens 0.05835125223143223 GLVSGGLYESHVGCR Unmodified 1589.762 0.76202492 226 P07858;E9PHZ5;A0A024R374;A8K2H4;A0A7P0NGZ6;A0A7I2YQK9;A0A7I2V668;E9PQM1;A0A7I2V440;E9PR21;B4DMY4;B3KUJ8;Q6LAF9;Q8TAC7 CTSB Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes no 0 0 0 7.5 0.5 1 1 43.749 43.794 3 3.197E-42 10977 20230619_1888_Aki_TMTPro18x_K_F8 278.06 250.7 61730 45789 58876 64213 68941 76940 80750 75421 100170 66724 74663 86849 85002 71078 78455 83092 85603 93685 57025 42084 60245 63483 71164 76774 81279 76941 99815 68576 78345 86708 86126 74481 80314 83887 81891 88840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 205260000 10617 226 10042 20327;20328 16296;16297 16297 2 9606 Homo sapiens -0.009265611363389326 GLVSTLQSATEQMAATVAGSVR Unmodified 2176.1158 0.1157814 1743 A0A8B0RAT7;Q6P2E9;Q6P2E9-2;I3L2F4 EDC4 Enhancer of mRNA-decapping protein 4 yes no 0 0 0 5 0 1 65.941 65.984 3 2.7956E-23 20572 20230619_1885_Aki_TMTPro18x_K_F5 175.59 160 5512 10770 9484.2 10846 7473.9 6920.1 9976 12677 9483.5 12738 12432 10967 9527.8 11267 8189.3 12551 11829 7240.3 5171.3 9841.3 9281.7 10907 7963.1 7437.9 9911.6 12547 9816.4 12802 12477 11230 9776.7 11658 8575.1 12286 11251 6949.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 283720000 10618 1743 10043 20329 16298 16298 1 9606 Homo sapiens 0.07476813995617704 GLVVLGFPCNQFGHQENAK Unmodified 2114.0367 0.036743217 3398 Q7L4Q3;P07203;A0A994J707;Q6NSD4;A0A994J4K6 GPX1 Glutathione peroxidase;Glutathione peroxidase 1 yes no 0 0 0 2 0 1 58.076 58.091 3 4.2499000000000003E-20 17849 20230619_1881_Aki_TMTPro18x_K_F2 189.81 171.95 45586 28682 38478 43335 40048 59401 47237 48498 57828 59201 58414 67945 70709 62245 59245 79223 74307 85506 42037 26404 39754 42737 41821 58535 47539 50572 58364 59537 60502 68384 71263 65290 61391 79623 71028 81106 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86638000 10619 3398 10044 20330 16299 16299 1 9606 Homo sapiens 0.024286315519930213 GLVVPSGGGR Unmodified 897.50321 0.50321468 312 A0A024R4X7;Q9UKX7-2;Q9UKX7;B0QY21 hCG_1989366;NUP50 Nuclear pore complex protein Nup50 yes no 0 0 0 8 0 1 40.614 40.607 2 0.048142 9718 20230619_1888_Aki_TMTPro18x_K_F8 66.27 52.276 53855 43580 49276 54915 62443 70105 60367 62179 65818 75449 92437 99430 90036 77832 80433 77178 96808 97863 49760 39994 50672 54713 63783 69550 61179 64419 67828 76243 93521 99065 91515 80972 82841 78745 92474 92728 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21766000 10620 312 10045 20331 16300 16300 1 9606 Homo sapiens 0.050363204745849544 GLVVPVIR Unmodified 851.55927 0.559273 390 A0A024R6C9;P36957;Q6IBS5;P36957-2;Q86TQ8;Q86TW7 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes no 0 0 0 3.5 0.5 1 1 52.984 53.024 2 0.0017604 15500 20230619_1882_Aki_TMTPro18x_K_F3 137.5 85.817 314250 278120 302950 326670 328390 359390 383530 398940 428320 371590 363550 345940 406560 335950 371640 408920 362870 394230 290640 254980 309260 326450 340570 361870 384860 403980 431160 376290 377850 352210 411840 350800 378260 408840 347500 374480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 702560000 10621 390 10046 20332;20333 16301;16302 16301 2 9606 Homo sapiens 0.12755573382048624 GLVVTDLK Unmodified 843.50657 0.50656873 714 E9PPA0;A0A024RCB5;B7Z705;B4DN31;Q9BWS9-3;Q9BWS9;E9PKF1;E9PI70;E9PIP0;E9PRL3;E9PPH0;Q9BWS9-2 CHID1 Chitinase domain-containing protein 1 yes no 0 0 0 7 0 1 53.549 53.616 2 0.00064823 15175 20230619_1887_Aki_TMTPro18x_K_F7 136.16 54.197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10622 714 10047 20334 16303 16303 1 9606 Homo sapiens 0.07855570528579392 GLVYETSVLDPDEGIR Unmodified 1761.8785 0.87849447 651 O75390;A0A024RB75;B4DJV2;B3KTN4;A0A0C4DGI3;F8W4S1;B7Z1E1;F8VPF9;F8VPA1;H0YH82;F8VTT8;F8W1S4;F8W642;F8VZK9;F8VX68;F8VRP1;F8VX07 CS Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 2.5 0.5 1 1 60.231 60.251 3 9.1748E-26 18501 20230619_1882_Aki_TMTPro18x_K_F3 226.88 201.95 65135 52471 65563 69010 63471 67545 67612 72225 72369 83539 79103 77615 75079 75086 85650 90691 87256 92329 60226 48175 66548 68318 66179 68524 68122 73752 73792 83614 80691 78991 77336 78324 87029 90964 83506 87659 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1066799999.9999999 10623 651 10048 20335;20336 16304;16305 16305 2 9606 Homo sapiens 0.028030358445448655 GLWGPVHELGR Unmodified 1219.6462 0.64619053 4736 Q9Y4C2-2;Q9Y4C2;B4DST7;B7Z246 TCAF1 TRPM8 channel-associated factor 1 yes no 0 0 0 1 0 1 49.298 49.298 3 1.9411E-17 14076 20230619_1880_Aki_TMTPro18x_K_F1 190.57 161.62 45992 36100 44010 41965 30862 42989 40932 45680 54214 50972 51857 49210 55572 48570 46678 53751 50054 50074 42501 33107 44669 41936 33465 43439 41130 46607 54374 51187 53449 50027 56185 50388 47847 53713 47859 47599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89383000 10624 4736 10049 20337 16306 16306 1 9606 Homo sapiens 0.04515327865783547 GLWHEEMK Unmodified 1028.475 0.47495102 2555 B4DNN4;Q53GZ5;P23921;B4E0I8;E9PL69;B4DXB0;B4DS95;B4DXD1 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 0 0 0 4.5 0.5 1 1 44.767 44.828 3 0.0006118 11564 20230619_1885_Aki_TMTPro18x_K_F5 131.06 101.32 132380 118620 143070 131650 145500 182060 154610 148180 190820 159040 153850 138390 167390 124840 139510 149280 160460 142610 122560 108690 144440 132590 151370 179470 156470 153980 190830 159630 160050 141000 168990 130610 143550 149230 153200 135580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148510000 10625 2555 10050 20338;20339 16307;16308 16308 2 9606 Homo sapiens -0.0381474549703853 GLYAAAAGVLAGVESR Acetyl (Protein N-term) 1545.8151 0.81510635 2309 B2RD09;Q96P11-2;Q96P11;Q96P11-4;Q96P11-5 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes no 1 0 0 7 0 1 67.193 67.215 2 2.4992E-11 21015 20230619_1887_Aki_TMTPro18x_K_F7 127.56 112.89 2518.5 1870.3 2151 2189.1 2460.9 3169.8 3176.4 3883 2591.8 3096.7 3631.6 2101.7 3329.8 2531.9 3307.8 2551.1 4019.3 2712.5 2324.6 1715.7 2221.9 2199 2553.1 3145.2 3145.2 3891.3 2715.4 3139 3654.3 2199.3 3404.9 2601.6 3398.3 2575.1 3829.7 2579.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18646000 10626 2309 10051 20340 16309 16309 1 9606 Homo sapiens 0.06403139917961198 GLYAAFDCTATMK Oxidation (M) 1463.6425 0.64248664 332 A0A024R5C5;P11498 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 1 0 8 0 1 56.055 56.117 3 3.2683E-05 16203 20230619_1888_Aki_TMTPro18x_K_F8 113.61 107.45 66296 71633 79525 87406 86329 84220 90189 77429 79362 96384 112090 102350 100500 90068 108860 94572 96742 110840 61526 65654 79826 86927 89061 85299 90396 80145 82815 96543 112930 103230 103320 93558 109800 95928 92776 105050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84270000 10627 332 10052 20341 16310 16310 196 1 9606 Homo sapiens -0.07078890805269111 GLYATHACGEHLEAFALLER Unmodified 2257.095 0.094986378 3395 P07101-3;P07101-4;P07101-2;P07101 TH Tyrosine 3-monooxygenase yes no 0 0 0 6 0 1 54.492 54.569 4 3.7267E-37 15826 20230619_1886_Aki_TMTPro18x_K_F6 189.9 166.41 65987 50586 67144 110920 48655 69843 62028 55516 69848 81344 68562 93113 94238 84318 84105 91378 95621 108050 61001 46785 68106 106320 52491 73292 62031 58544 70766 81187 71710 93584 94926 87644 86377 92627 91465 102410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63745000 10628 3395 10053 20342 16311 16311 1 9606 Homo sapiens 0.016722684066735383 GLYCYELDEK Unmodified 1288.5646 0.56455389 2802 CON__Q3ZBS7 yes yes 0 0 0 3 0.816 1 1 1 54.185 54.213 3 4.2397E-05 16037 20230619_1882_Aki_TMTPro18x_K_F3 140.45 119.07 + 169100 154600 145300 255160 368990 424890 261180 254570 514170 746240 1291100 2015800 885240 1044300 1579400 926730 1248900 1847500 156300 142270 153660 251090 363420 412760 277660 285570 540000 765450 1276300 1952200 950610 1101900 1572200 986700 1202200 1742800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2384300000 10629 2802 10054 20343;20344;20345 16312;16313 16312 2 9606 Homo sapiens -0.06818580398976337 GLYDGPVCEVSVTPK Unmodified 1619.7865 0.78650834 1284 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q8NAN9 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 0 0 0 6 0.816 2 2 2 55.049 55.118 2;3 1.5727E-07 15784 20230619_1887_Aki_TMTPro18x_K_F7 121.56 98.323 94261 74069 81922 91426 65520 96197 77359 82512 91582 112620 101950 97066 102150 107060 113750 111730 124650 131620 87045 67967 84073 90952 69917 96548 77817 86035 93019 111740 104130 99575 104950 110320 116060 113320 119200 124770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8976200000 10630 1284 10055 20346;20347;20348;20349;20350;20351 16314;16315;16316 16315 3 9606 Homo sapiens 0.0014065422651583503 GLYEDCSSCFQAMGK Oxidation (M) 1767.6902 0.69024146 2827 K7EMM8;D3DUE6;Q49A26-5;Q49A26-2;Q49A26;D3DUE7;Q49A26-4;Q49A26-3 GLYR1;N-PAC Putative oxidoreductase GLYR1 yes no 0 1 0 6 0 1 49.599 49.676 3 0.0013726 13758 20230619_1886_Aki_TMTPro18x_K_F6 78.486 74.315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10631 2827 10056 20352 16317 16317 1684 1 9606 Homo sapiens -0.1628960466737226 GLYGGSSYVDFLCCVHK Unmodified 1960.8812 0.88115378 2096 B3KM89;A8K6V0;O94855;O94855-2;E9PDM8 SEC24D Protein transport protein Sec24D yes no 0 0 0 3 0 1 61.117 61.146 3 2.0262E-18 18898 20230619_1882_Aki_TMTPro18x_K_F3 178.07 168.28 49710 41884 41384 45817 46140 55826 64555 62410 68135 37145 31047 26423 36164 24007 42037 43703 32525 36029 45911 38380 42855 46101 48090 55830 64075 62613 67635 38611 33822 27295 36991 25917 42130 43160 31236 34289 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164360000 10632 2096 10057 20353 16318 16318 1 9606 Homo sapiens -0.060851552937720044 GLYNEHTVDR Unmodified 1202.568 0.56799978 4123 Q6P6C2-3;Q6P6C2;Q6P6C2-1 ALKBH5 RNA demethylase ALKBH5 yes no 0 0 0 3 0 1 33.497 33.563 3 2.6115E-07 6993 20230619_1882_Aki_TMTPro18x_K_F3 162.36 131.08 26843 24509 27167 32070 33770 39769 33863 41279 43753 40435 59074 61284 54969 48577 53863 41752 62433 53707 24841 22491 27704 31860 34590 39649 34468 42022 44580 41538 59722 60819 56188 50158 55190 42786 59592 50917 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36315000 10633 4123 10058 20354 16319 16319 1 9606 Homo sapiens -0.025181495101151086 GLYPAPLK Unmodified 857.50109 0.50108942 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5;A0A2R8YG21;A0A2R8Y688 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 2.5 0.5 1 1 51.726 51.778 2 0.0085142 14964 20230619_1882_Aki_TMTPro18x_K_F3 117.7 70.35 211130 206600 186200 199590 331410 470420 313370 323250 484800 81162 85754 81818 91985 86689 114800 114930 97009 91142 195270 189020 193700 205640 333480 451430 321780 333650 466950 95989 107040 83522 95033 90676 115360 113720 92949 86841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 224520000 10634 2908 10059 20355;20356 16320 16320 1 9606 Homo sapiens 0.06663891736764072 GMAAAGNYAWVNR Oxidation (M) 1395.6354 0.63536784 4728 Q9Y3I0;B4DNA0 RTCB tRNA-splicing ligase RtcB homolog yes no 0 1 0 1.5 0.5 1 1 44.11 44.151 2 0.00021185 11734 20230619_1881_Aki_TMTPro18x_K_F2 105.94 89.362 50444 40595 51051 49381 59182 62102 56543 56554 66339 60471 67134 54811 61186 51403 60769 64578 63377 69043 46644 37242 51916 49323 60742 61716 57476 58248 67044 60752 68501 55844 62610 53855 61970 64919 60653 65510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66981000 10635 4728 10060 20357;20358 16321 16321 2883 1 9606 Homo sapiens -0.04662442570815983 GMAAAGNYAWVNR Unmodified 1379.6405 0.64045322 4728 Q9Y3I0;B4DNA0 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 3 0 1 49.593 49.671 2 1.0506E-10 13967 20230619_1882_Aki_TMTPro18x_K_F3 186.16 168.29 117430 97277 115810 106310 105590 136320 121000 131010 146540 142970 128050 135120 151210 131970 148690 169990 158650 159440 108580 89142 117590 107080 111090 135420 121940 134450 147170 143630 133340 137450 153520 138230 151910 169560 151710 151550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 385340000 10636 4728 10060 20359 16322 16322 1 9606 Homo sapiens -0.034181387082071524 GMAFLHTLEPLIPR Oxidation (M) 1609.865 0.86503343 963 V9HWF0;A0A0A0MTH3;Q13418;Q13418-3;Q13418-2 HEL-S-28;ILK Integrin-linked protein kinase yes no 0 1 0 3 0 1 60.332 60.361 3 2.9494E-07 18581 20230619_1882_Aki_TMTPro18x_K_F3 138.02 98.396 17267 18159 19930 19355 21496 20778 20096 19664 26442 20853 23078 19206 23377 20537 24356 22609 23760 25512 16015 16623 20039 19478 22146 20894 20542 20199 26429 20980 23827 19637 23901 21256 24708 22855 22751 24194 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97665000 10637 963 10061 20360 16323 16323 543 1 9606 Homo sapiens 0.08449551322291882 GMDDDRGPR Unmodified 1017.4298 0.42979174 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 1 0 1 26.975 26.975 3 0.00024899 4814 20230619_1880_Aki_TMTPro18x_K_F1 128.28 111.18 39200 18763 44526 42198 51480 58039 44701 52068 55298 46505 60122 60592 61930 54068 49992 29594 67367 56761 36194 17402 44875 40857 52753 57296 45828 53428 55896 47744 61524 60596 62596 54724 51878 31735 64215 53663 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134330000 10638 3152 10062 20361 16324 16324 1 9606 Homo sapiens -0.07822596030212026 GMDLQPGNALK Unmodified 1142.5754 0.57539335 4224 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 7 0 1 50.738 50.816 2 0.034627 13955 20230619_1887_Aki_TMTPro18x_K_F7 72.643 41.569 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10639 4224 10063 20362 16325 16325 1 9606 Homo sapiens 0.009808667659399362 GMDQGLLGMCPGER Oxidation (M) 1535.6531 0.6530681 167 A0A024R1W3;Q96AY3;Q658U4;Q6ZME7;K7ESG6 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10;Peptidyl-prolyl cis-trans isomerase yes no 0 1 0 4 0 1 47.524 47.566 3 0.022123 12889 20230619_1883_Aki_TMTPro18x_K_F4 50.324 39.495 100990 84258 89699 100370 109790 118080 111130 114840 138120 122320 144180 147490 148280 132490 135780 147500 174010 163160 93305 77272 92425 100270 112530 118000 112810 117740 139360 124020 147840 148100 150690 137930 140450 148830 166040 154850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68975000 10640 167 10064 20363 16326 16326 105 1 9606 Homo sapiens -0.0933323142246536 GMDQGLLGMCPGER Unmodified 1519.6582 0.65815348 167 A0A024R1W3;Q96AY3;Q658U4;Q6ZME7;K7ESG6 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 5.5 0.5 1 1 53.258 53.33 2;3 2.8336E-05 15354 20230619_1886_Aki_TMTPro18x_K_F6 141.13 134.9 32727 29201 30652 28904 27321 32227 32713 30249 40373 40444 35456 35840 42597 34369 35739 49378 42859 43660 30263 26729 31252 29284 28818 32306 32906 31313 40523 40197 36921 36557 42921 36301 36932 49015 40944 41526 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83293000 10641 167 10064 20364;20365 16327;16328 16328 2 9606 Homo sapiens -0.08088927559833792 GMEELIPLVNK Unmodified 1241.669 0.66895938 3619 P50570-3;P50570-2;P50570-5;P50570-4;P50570 DNM2 Dynamin-2 yes no 0 0 0 7.5 0.5 1 1 62.438 62.469 3 0.013081 18878 20230619_1887_Aki_TMTPro18x_K_F7 65.627 36.883 355750 324020 338620 366380 251520 359520 360570 350700 379380 412520 398720 388310 424440 369250 387460 465590 427720 456240 329050 296920 344380 366530 271720 363770 357940 360620 386350 412820 409260 394780 430690 386610 397310 465570 409040 433330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 587690000 10642 3619 10065 20366;20367 16329 16329 1 9606 Homo sapiens 0.05779166148386139 GMEGSLER Oxidation (M) 893.39128 0.39128097 2383 Q7Z4T7;Q5T427;B3KQ40;B4DFT8;Q7Z4V0-3;Q7Z4V0-2;Q7Z4V0 ZNF438 Zinc finger protein 438 yes no 0 1 0 1.5 0.5 1 1 31.9 31.931 2 0.033339 6761 20230619_1880_Aki_TMTPro18x_K_F1 71.922 20.068 19267 15255 19682 20963 26967 23339 20465 23782 27512 21834 31751 28244 24906 22897 26016 21603 29993 26886 17815 14014 20065 20729 27221 23442 21244 24206 27766 22372 32051 28212 25701 23722 26629 22044 28637 25492 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22114000 10643 2383 10066 20368;20369 16330 16330 1469 1 9606 Homo sapiens -0.059679016647237404 GMEGSLER Unmodified 877.39637 0.39636635 2383 Q7Z4T7;Q5T427;B3KQ40;B4DFT8;Q7Z4V0-3;Q7Z4V0-2;Q7Z4V0 ZNF438 Zinc finger protein 438 yes no 0 0 0 2 0 1 37.477 37.537 2 0.0095886 8697 20230619_1881_Aki_TMTPro18x_K_F2 101.28 18.613 113230 73024 112510 116900 141390 145530 143360 149430 164780 128830 158210 168170 167980 149430 132440 103830 212250 184320 104550 67265 114820 114780 144560 145030 145090 151810 166260 132550 163080 168180 169570 152430 139510 109690 202120 174310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113020000 10644 2383 10066 20370 16331 16331 1 9606 Homo sapiens -0.047235978021149094 GMGEAVQEFVDK Unmodified 1308.602 0.60200203 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2;Q05D78 MRE11A Double-strand break repair protein MRE11A yes no 0 0 0 4.5 0.5 1 1 59.436 59.464 3 0.0015882 18154 20230619_1883_Aki_TMTPro18x_K_F4 63.662 20.686 68275 53248 72353 71872 61805 74831 69579 71000 84067 81105 79077 83427 89659 72963 79079 100230 95308 113670 63145 48909 73000 71089 65301 75332 70187 73075 84644 81506 81858 84255 90668 77095 81619 100960 91160 107750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 24178000 10645 229 10067 20371;20372 16332;16333 16332 2 9606 Homo sapiens -0.03995489133376395 GMGPGTPAGYGR Unmodified 1119.5131 0.51312744 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 5.33 3.09 1 1 1 38.558 38.574 2 1.6527E-09 9437 20230619_1880_Aki_TMTPro18x_K_F1 184.87 167.64 243350 200660 232870 244150 227100 280100 241730 234980 289230 289380 286460 236220 317770 234220 198460 328250 320870 246790 224950 184070 237430 243450 237070 279430 244410 244630 291960 288010 294890 242440 317530 246740 211360 323420 305310 235530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 276850000 10646 1450 10068 20373;20374;20375 16334;16335;16336 16334 3 9606 Homo sapiens -0.04184859582369427 GMGPGTPAGYGR Oxidation (M) 1135.508 0.50804206 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 1 0 7 0.816 1 1 1 33.589 33.628 2 0.00035634 7093 20230619_1886_Aki_TMTPro18x_K_F6 106.88 94.353 130890 95843 110490 121520 133960 140490 122690 119810 140030 130560 142730 106930 143930 109400 101640 145110 145110 117160 120790 87997 114340 120840 137010 140170 124910 124110 141790 130720 146060 109900 144790 114700 106730 143560 138230 111680 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 370580000 10647 1450 10068 20376;20377;20378 16337;16338;16339 16337 947 3 9606 Homo sapiens -0.05429163445000995 GMGSLDAMDK 2 Oxidation (M) 1055.4263 0.42634585 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 2 0 3.5 0.5 1 1 37.931 37.979 3 0.0024965 8757 20230619_1882_Aki_TMTPro18x_K_F3 73.841 55.573 42694 34530 45457 51120 51301 45915 53304 42454 53896 45231 52070 45559 50707 40780 42517 54851 57546 52215 39497 31746 46058 50169 52771 46764 53627 43741 54771 45597 53400 46123 51407 42976 44274 54708 54877 49642 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41086000 10648 1454 10069 20379;20380 16340 16340 955;956 1 9606 Homo sapiens -0.09915026919088632 GMGSLDAMDK Unmodified 1023.4365 0.43651661 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 0 0 4 0 1 50.01 50.045 3 0.002997 14000 20230619_1883_Aki_TMTPro18x_K_F4 72.321 37.942 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10649 1454 10069 20381 16341 16341 1 9606 Homo sapiens -0.07426419193859601 GMGTVEGGDQSNPK Oxidation (M) 1391.5987 0.59870757 1505 Q13428-4;A0A3B3IS06;Q13428-3;Q13428;Q13428-7;Q13428-6;Q13428-8;Q13428-2;E7ETY2;A0A6I8PRA0;B4DRA2;Q9UFD4;H0YA99 TCOF1;DKFZp434G1035 Treacle protein yes no 0 1 0 3 0 1 34.737 34.798 3 0.00081669 7498 20230619_1882_Aki_TMTPro18x_K_F3 79.875 62.439 9104.2 5270.5 12510 15042 14144 15481 13163 14394 14935 12172 19601 19576 16836 13468 15664 10776 20242 17498 8429.1 4906.8 12464 14369 14527 15576 13394 14726 15278 12646 19767 19324 17210 13960 16172 11266 19304 16558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27497000 10650 1505 10070 20382 16342 16342 1003 1 9606 Homo sapiens -0.08142783978041734 GMGTVEGGDQSNPK Unmodified 1375.6038 0.60379294 1505 Q13428-4;A0A3B3IS06;Q13428-3;Q13428;Q13428-7;Q13428-6;Q13428-8;Q13428-2;E7ETY2;A0A6I8PRA0;B4DRA2;Q9UFD4;H0YA99 TCOF1;DKFZp434G1035 Treacle protein yes no 0 0 0 3 0 1 39.876 39.932 3 0.016491 9572 20230619_1882_Aki_TMTPro18x_K_F3 60.401 47.609 51080 35170 48157 51402 52780 58406 55654 57800 62549 62909 70174 63998 67101 57998 59951 62234 76124 59029 47163 32350 49253 50653 54546 58496 56178 59214 63635 63335 71456 64732 68258 60239 61985 62299 72560 56162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34967000 10651 1505 10070 20383 16343 16343 1 9606 Homo sapiens -0.06898480115410166 GMGTVQK Oxidation (M) 735.35852 0.35852428 3593 Q6IAX2;P46778;M0R181;G3V1B3;Q59GK9 RPL21 60S ribosomal protein L21 yes no 0 1 0 6.5 0.5 1 1 32.821 32.883 2 0.068961 6463 20230619_1887_Aki_TMTPro18x_K_F7 71.342 31.244 46159 16911 65899 62551 93672 93446 71544 95043 59190 36396 74195 76761 51385 66968 79398 20442 83167 79084 42686 15898 65684 59742 94332 92081 73134 95339 61474 41147 74502 75734 54651 66899 80115 24776 79509 74508 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33285000 10652 3593 10071 20384;20385 16344 16344 2262 1 9606 Homo sapiens -0.019740639969313634 GMGYMPK Oxidation (M) 798.34043 0.34043138 676;373 A0A024R611;P31146;H3BRY3;Q9ULV4-3;Q9ULV4-2;Q9ULV4;Q59EA2;A0A024RBI5;B3KN06;Q53G58;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 CORO1A;CORO1C Coronin;Coronin-1A;Coronin-1C no no 0 1 0 1 0 1 40.88 40.88 2 0.088562 10504 20230619_1880_Aki_TMTPro18x_K_F1 68.033 14.567 47923 34377 38427 43697 57923 65098 52479 47275 59133 48891 60352 53198 51691 47540 52256 50541 65742 53292 44206 31566 40154 43617 58516 63785 53410 49576 59871 49497 61440 53646 53096 49370 53856 50909 62685 50634 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43835000 10653 373;676 10072 20386 16345 16345 227 1 9606 Homo sapiens -0.06680522243289033 GMGYMPK Unmodified 782.34552 0.34551675 676;373 A0A024R611;P31146;H3BRY3;Q9ULV4-3;Q9ULV4-2;Q9ULV4;Q59EA2;A0A024RBI5;B3KN06;Q53G58;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 CORO1A;CORO1C Coronin;Coronin-1A;Coronin-1C no no 0 0 0 1.5 0.5 1 1 45.874 45.915 2 0.024225 12494 20230619_1881_Aki_TMTPro18x_K_F2 99.511 24.679 131500 113880 122010 132230 127040 159220 143170 131080 156360 164280 165270 172910 198760 145790 152860 214610 198500 164800 121570 104400 124900 132380 132160 158290 143820 136780 159000 164520 170630 174290 199500 154930 159090 211590 189250 157180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105980000 10654 373;676 10072 20387;20388 16346 16346 1 9606 Homo sapiens -0.054362183806688336 GMKDDKEEEEDGTGSPQLNNR Oxidation (M) 2364.0136 0.013560752 2004 P49407;P49407-2;A8K103 ARRB1 Beta-arrestin-1 yes no 0 1 2 3 0 1 36.257 36.312 4 2.987E-05 8090 20230619_1882_Aki_TMTPro18x_K_F3 90.718 83.096 22020 20820 23420 18641 22162 16949 22671 21068 23107 31105 33199 25567 34051 26068 28765 35967 34764 29560 20392 19039 23615 19020 23065 17405 22859 21505 23951 30715 33568 26261 34454 27406 29713 35605 33168 28163 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23789000 10655 2004 10073 20389 16347 16347 1258 1 9606 Homo sapiens -0.11388548604600146 GMLDTHHK Oxidation (M) 953.4389 0.43889987 406 A0A024R6Q1;P55010;Q6IBU0;H0YLZ1;Q32Q19;Q05DF3;H0YN40 EIF5 Eukaryotic translation initiation factor 5 yes no 0 1 0 5.5 0.5 1 1 28.487 28.539 3 0.053622 5142 20230619_1885_Aki_TMTPro18x_K_F5 45.68 39.021 7204.7 6608.2 8058.4 11006 11237 7840.1 8597.4 8877.6 9826.5 10047 9722.2 10777 10189 8681 10381 8480.7 13281 10952 6673.6 6081.7 8173.4 10702 11312 8200.3 8862.2 9035.5 9946.7 10110 10010 10826 10397 9017.2 10700 8670.9 12663 10385 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5992900 10656 406 10074 20390;20391 16348 16348 258 1 9606 Homo sapiens -0.039682026738887544 GMLPDPK Oxidation (M) 772.37893 0.37892537 3439;3388;1072 A0A0S2Z3H3;P12235;A8K787;A0A0S2Z3C4;P05141;Q6NVC0;P12236;Q6I9V5;Q59EI9 SLC25A4;SLC25A5;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 1 0 5.5 0.5 1 1 42.091 42.179 3 0.072251 10391 20230619_1886_Aki_TMTPro18x_K_F6 43.124 9.5731 101940 72236 102940 114790 134800 153380 132840 131870 155350 98877 111980 109260 106240 89358 106680 95433 119530 101450 94193 66505 105060 112840 137500 151580 134700 135310 155080 102130 116680 109800 108660 93160 109110 96193 114120 96358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 342050000 10657 1072;3388;3439 10075 20392;20393 16349 16349 634 1 9606 Homo sapiens -0.016368933371154526 GMLPDPK Unmodified 756.38401 0.38401075 3439;3388;1072 A0A0S2Z3H3;P12235;A8K787;A0A0S2Z3C4;P05141;Q6NVC0;P12236;Q6I9V5;Q59EI9 SLC25A4;SLC25A5;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 0 0 6.5 1.12 1 1 1 1 47.098 47.172 2 0.023306 12251 20230619_1887_Aki_TMTPro18x_K_F7 100.74 80.46 823700 685550 748610 823290 840770 913400 1004800 926650 1156900 991310 1071400 1050700 1213800 936160 937740 1261800 1172200 1032100 761160 628760 768690 821400 870550 917200 1007900 947660 1166100 1000500 1109100 1060800 1220800 986680 973090 1249100 1118400 983250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 749240000 10658 1072;3388;3439 10075 20394;20395;20396;20397 16350;16351 16351 2 9606 Homo sapiens -0.003925894745066216 GMNFSVVVFDTAPTGHTLR Oxidation (M) 2064.0099 0.0098597649 3263 O43681;B4DEE5 ASNA1 ATPase ASNA1 yes no 0 1 0 1.5 0.5 1 1 54.732 54.744 3 1.074E-14 16476 20230619_1881_Aki_TMTPro18x_K_F2 153.68 135.6 37699 32112 34577 36660 33267 38319 36837 36999 47374 40056 43320 38238 41353 39142 42189 48472 49669 42276 34844 29435 35377 36680 34792 38597 37265 37973 47477 40288 44521 38971 42347 40814 43331 48199 47399 40247 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 401480000 10659 3263 10076 20398;20399 16352;16353 16353 1926 2 9606 Homo sapiens 0.020415229408627056 GMNQVLDVPLTVK Oxidation (M) 1428.7647 0.76465068 2324 B2RDV7;Q96G46;Q96G46-2;D6W636;Q96G46-3;O95323;K7ER20;K7EQU9 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)];tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes no 0 1 0 8 0 1 56.999 57.051 3 0.047378 16592 20230619_1888_Aki_TMTPro18x_K_F8 42.317 29.18 59571 48114 61494 58345 63508 80810 69498 69994 88246 54555 58138 57086 67736 56760 69254 63754 61749 65780 55094 44138 62337 58384 66075 79726 70289 71824 87536 56124 61498 57866 68897 58939 69951 64091 59182 62442 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30915000 10660 2324 10077 20400 16354 16354 1429 1 9606 Homo sapiens 0.06741894268589022 GMPFSIDTAGSAPK Oxidation (M) 1393.6548 0.65476588 4783 yes no 0 1 0 1 0 1 58.435 58.435 3 0.020012 17876 20230619_1880_Aki_TMTPro18x_K_F1 52.576 38.318 + 57888 54423 58870 68612 54893 68255 60214 65649 61468 83913 73350 64670 69911 65325 89181 95611 73536 95411 53585 49918 59725 68107 57523 68971 60492 67717 63140 83202 74541 66606 72398 68965 89532 95550 70662 90544 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292880000 10661 4783 10078 20401 16355 16355 2910 1 9606 Homo sapiens -0.026315310705740558 GMPQEER Unmodified 845.37015 0.3701516 724 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;H0Y400 DDX39B;hCG_2005638 Spliceosome RNA helicase DDX39B yes no 0 0 0 1.5 0.5 1 1 30.958 30.99 2 0.022597 6361 20230619_1880_Aki_TMTPro18x_K_F1 101.69 52.101 46330 22543 58375 56464 84555 93918 57498 78881 69477 46382 81255 98363 63702 68067 74670 28479 80798 80850 42824 20949 58669 54651 85025 91690 59996 80689 70459 50210 82178 96348 66177 69092 75811 32354 77248 76237 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81142000 10662 724 10079 20402;20403 16356;16357 16356 2 9606 Homo sapiens -0.058718669735981166 GMPTGEAMVAFESR Unmodified 1481.6643 0.66428471 4096 Q69YJ7;Q9NTZ6;B4DRP9;B3KQH4 DKFZp667H197;RBM12 RNA-binding protein 12 yes no 0 0 0 5 0 1 54.868 54.935 2 2.6411E-08 15822 20230619_1885_Aki_TMTPro18x_K_F5 158.42 134.26 24761 22935 25780 29428 24577 30777 30604 29707 35149 34023 34970 31608 36854 29780 35341 35513 37256 44537 22923 21042 26115 29197 25813 30985 30648 30541 35542 34086 35951 32149 37472 31112 36072 36095 35678 42179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18303000 10663 4096 10080 20404 16358 16358 1 9606 Homo sapiens -0.057280860566834235 GMPVTAR Unmodified 730.37959 0.37959407 3527 V9HWC7;P30041;A4UCS6 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 0 7.5 0.5 1 1 34.55 34.584 2 0.0043206 7115 20230619_1887_Aki_TMTPro18x_K_F7 149.06 60.433 291910 171800 299790 314040 449160 491460 396430 422090 460040 363310 471430 521780 492180 429900 458190 246720 582110 509160 269510 158620 306250 307480 453310 481600 404730 434250 465200 375320 484420 518800 500190 437060 472080 266330 555260 481090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 751410000 10664 3527 10081 20405;20406 16359;16360 16359 2 9606 Homo sapiens 0.0036194610258917237 GMQELGVHPDQETYTDYVIPCFDSVNSAR Oxidation (M) 3343.4762 0.47615617 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 1 0 4.25 0.829 1 1 2 59.794 59.827 3;4 2.9537E-06 18273 20230619_1883_Aki_TMTPro18x_K_F4 89.631 87.348 20265 19216 23881 25370 23176 25609 25161 25373 25235 26760 32371 22360 24244 21340 26869 26076 23884 20805 18785 17634 23957 25116 24166 25871 25272 25975 25980 26832 32457 22904 25121 22290 27107 25841 22859 19828 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142140000 10665 1723 10082 20407;20408;20409;20410 16361;16362 16361 1127 2 9606 Homo sapiens -0.10184285774039381 GMQELGVHPDQETYTDYVIPCFDSVNSAR Unmodified 3327.4812 0.48124155 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 4.5 1.12 1 1 1 1 61.571 61.605 3 3.1852E-14 18623 20230619_1885_Aki_TMTPro18x_K_F5 128.43 118 121150 98645 121450 129010 95572 136340 129100 128900 147360 163470 159060 155230 182020 144160 146950 181750 165120 190560 112020 90561 123050 127880 102470 137050 128840 133120 149650 163100 163590 157620 183300 151140 151250 182410 157990 180810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 190670000 10666 1723 10082 20411;20412;20413;20414 16363;16364;16365 16363 3 9606 Homo sapiens -0.08939981911453287 GMQLHGVLR Oxidation (M) 1025.544 0.54403364 644 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8;Q9BSJ8-2 FAM62A;ESYT1 Extended synaptotagmin-1 yes no 0 1 0 1.5 0.5 1 1 33.69 33.719 3 0.00045349 7475 20230619_1880_Aki_TMTPro18x_K_F1 109.71 77.394 35627 23014 29346 35175 35695 45596 34668 38444 47031 22396 25926 25309 25459 19654 31006 24503 25954 23020 32852 21186 30470 34630 36636 45112 35388 39331 46288 23631 27581 25390 26254 20720 31115 24486 24861 21891 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55292000 10667 644 10083 20415;20416 16366 16366 382 1 9606 Homo sapiens 0.032283385225582606 GMQLHGVLR Unmodified 1009.5491 0.54911902 644 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8;Q9BSJ8-2 FAM62A;ESYT1 Extended synaptotagmin-1 yes no 0 0 0 3 0 1 39.487 39.541 3 4.2027E-05 9414 20230619_1882_Aki_TMTPro18x_K_F3 124.08 99.305 38645 36765 37932 33746 41906 50260 47718 41471 52111 20797 19748 20423 19930 16319 29859 24183 25284 18954 35765 33626 38638 34578 43400 49376 47871 42430 51448 22180 21827 20637 20819 17378 29901 23903 24192 18082 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20763000 10668 644 10083 20417 16367 16367 1 9606 Homo sapiens 0.044726423851670916 GMSAEYSFPIWK Oxidation (M) 1430.654 0.6540376 4742 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog yes yes 0 1 0 1 0 1 61.205 61.205 3 0.025882 18967 20230619_1880_Aki_TMTPro18x_K_F1 49.632 33.494 31035 30925 39314 40572 54173 50740 46992 45124 50268 42207 45809 45370 48101 46495 45357 56183 46604 55245 28800 28372 39470 40305 54803 50426 47893 46411 50843 42936 47314 45992 48930 48408 46304 56219 44638 52450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32035000 10669 4742 10084 20418 16368 16368 2889 1 9606 Homo sapiens -0.04406325719628512 GMSAEYSFPIWK Unmodified 1414.6591 0.65912298 4742 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 2 0 1 62.481 62.49 3 2.0373E-05 19734 20230619_1881_Aki_TMTPro18x_K_F2 123.8 98.946 74721 60672 65387 67064 59550 81042 76758 68494 75299 71230 74558 70584 80385 63625 74893 82730 74966 79483 69018 55609 67145 67402 62903 80579 76344 70937 76752 71841 76774 71492 81559 66892 76302 82624 71758 75511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132650000 10670 4742 10084 20419 16369 16369 1 9606 Homo sapiens -0.03162021856996944 GMSEALK Unmodified 734.36328 0.36327531 2940 E9PNP3;Q9H7C9;E9PR47;E9PJP1;E9PLK9;K4DI89;Q9H7C9-3;Q9H7C9-2 AAMDC Mth938 domain-containing protein yes no 0 0 0 5 0 1 43.109 43.19 2 0.011045 10830 20230619_1885_Aki_TMTPro18x_K_F5 117.17 68.665 55407 37833 60098 56497 77470 88054 71247 74749 88620 63448 80395 79389 80640 73247 72854 52148 98621 82288 51217 34810 60905 55914 78959 86297 72735 76946 88880 65278 82869 79632 81982 74663 75511 54511 93998 77898 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45519000 10671 2940 10085 20420 16370 16370 1 9606 Homo sapiens -0.014531798541725038 GMSVSDLADK Oxidation (M) 1037.4699 0.46992522 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 1 0 4 0 1 43.864 43.908 2 0.0052863 11276 20230619_1883_Aki_TMTPro18x_K_F4 85.807 47.531 32541 25318 28078 39079 36949 47219 39811 42491 55607 44172 53220 54356 53118 44721 43654 49653 57280 59519 30046 23291 29107 38401 37844 46983 40450 43775 55609 44887 54701 54394 53776 46721 45342 50352 54689 56419 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31017000 10672 3954 10086 20421 16371 16371 2623 1 9606 Homo sapiens -0.047310941503155846 GMSVSDLADK Unmodified 1021.475 0.4750106 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 0 0 5 0 1 50.199 50.274 3 0.00036587 13864 20230619_1885_Aki_TMTPro18x_K_F5 109.42 85.264 44892 40041 46719 47112 48867 56486 54571 53042 69744 55585 57319 68425 74663 54074 53452 77521 76014 66727 41548 36708 47349 47130 50777 56327 55148 54499 69673 56457 60206 68397 74610 57504 56099 76848 72447 63527 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43939000 10673 3954 10086 20422 16372 16372 1 9606 Homo sapiens -0.034867902877067536 GMSVYGLGR Oxidation (M) 954.4593 0.45930096 3933 Q15417;Q15417-3;Q15417-2 CNN3 Calponin-3 yes no 0 1 0 1 0 1 40.477 40.477 2 0.0086426 10279 20230619_1880_Aki_TMTPro18x_K_F1 82.716 70.948 156970 136020 141460 141970 126160 134640 124390 122050 144180 91975 95896 77818 79236 68953 99331 89827 89851 73933 145080 124580 144720 142870 132240 136500 126180 124820 143680 94239 99856 79443 82380 72504 100070 89086 85950 70449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114790000 10674 3933 10087 20423 16373 16373 2612 1 9606 Homo sapiens -0.01975032014070166 GMTENEVEDR Unmodified 1178.4874 0.4873662 964 Q13617-2;Q13617;A0A0A0MTN0;A0A8I5QJI3;A0A8I5KYP8;A0A140VKB1;A0A8I5KUA9;A0A8I5KQQ5;Q5T2B5;A0A8I5KU22;A0A0D9SET6;A0A8I5KVR3;B7Z1Y1 CUL2 Cullin-2 yes no 0 0 0 1 0 1 35.391 35.391 2 1.0183E-06 8139 20230619_1880_Aki_TMTPro18x_K_F1 179.42 139.35 54732 37610 55501 55187 64739 69330 68409 65950 85786 74747 82417 80511 82135 74787 67925 75078 98883 88246 50564 34597 56457 54461 66615 68940 69284 67835 86240 75282 84672 81270 83229 77348 71061 76165 94238 83716 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46621000 10675 964 10088 20424 16374 16374 1 9606 Homo sapiens -0.09473798615317719 GMTLVTPLQLLLFASK Oxidation (M) 1746.9954 0.9953789 3811 Q08211;B3KU66;Q08211-2 DHX9 ATP-dependent RNA helicase A yes no 0 1 0 7 0.707 1 2 1 67.129 67.155 2;3 5.9958E-06 20769 20230619_1888_Aki_TMTPro18x_K_F8 107.07 93.411 25774 19416 24889 26375 29276 24680 29501 29014 28828 23434 24906 18651 18379 16113 23488 28593 20741 18483 23814 17837 25423 26045 30000 25200 29711 29195 29232 23836 25423 19113 19211 17350 23673 27951 19855 17670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 322890000 10676 3811 10089 20425;20426;20427;20428 16375;16376;16377 16377 2488 3 9606 Homo sapiens 0.15176102530631397 GMTLVTPLQLLLFASK Unmodified 1731.0005 0.0004642775 3811 Q08211;B3KU66;Q08211-2 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 7.5 0.5 1 1 68.203 68.223 3 5.1971E-11 21191 20230619_1888_Aki_TMTPro18x_K_F8 150.05 132.19 30651 23754 23388 24964 24715 26186 27131 27270 29848 22832 24654 20467 22246 17468 27991 25805 24303 14850 28277 21766 24389 25143 25643 26425 27299 27666 30022 23249 25421 20814 23044 18547 28143 25197 23223 14256 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53362000 10677 3811 10089 20429;20430 16378;16379 16378 2 9606 Homo sapiens 0.16420406393262965 GMTSLQCDCTEK Unmodified 1428.5683 0.56833541 232 B4DP84;H0YCN4;A0A024R3A2;Q9BTE7 DCUN1D5 DCN1-like protein;DCN1-like protein 5 yes no 0 0 0 4 0 1 43.934 43.978 3 0.00014949 11273 20230619_1883_Aki_TMTPro18x_K_F4 104.59 92.308 87131 74177 92429 92691 108460 105410 109280 90277 97759 99794 96338 77031 84338 63066 119420 82799 82865 70804 80629 68055 93683 92252 111230 105330 109750 93576 100230 99652 98349 78795 88021 66604 118590 82344 79554 67422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40179000 10678 232 10090 20431 16380 16380 1 9606 Homo sapiens -0.12880601959068372 GMTTVDDFFQGTK Oxidation (M) 1461.6446 0.64459513 1217 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 1 0 6 0 1 56.234 56.309 3 4.1179E-11 16578 20230619_1886_Aki_TMTPro18x_K_F6 179.6 168.82 83568 84062 88381 104700 127870 91995 88991 94605 87585 119470 106840 91920 114770 80921 96049 127720 111520 107150 77420 77078 89988 103860 128230 94206 92006 97132 90323 118490 108950 94267 115880 86387 99028 126340 106520 102010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 372020000 10679 1217 10091 20432 16381 16381 750 1 9606 Homo sapiens -0.06776138795817133 GMTVEGLK Unmodified 833.43169 0.43168922 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 6.5 0.5 1 1 48.507 48.589 2;3 0.00083942 13272 20230619_1886_Aki_TMTPro18x_K_F6 133.55 41.648 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10680 3402 10092 20433;20434 16382;16383 16382 2 9606 Homo sapiens 0.008310647256962511 GMVSAYPR Unmodified 879.42727 0.42727255 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 4.5 3.5 1 1 39.426 39.42 2 0.008542 9266 20230619_1888_Aki_TMTPro18x_K_F8 104.37 51.682 111560 90294 107310 99989 110920 129060 112240 116010 150710 66487 69885 58993 62686 52774 88548 61509 74101 57772 103120 82761 109380 100610 115100 127990 114250 118070 147850 69793 75169 60097 65462 55111 88632 61557 70926 54971 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 89076000 10681 471 10093 20435;20436 16384;16385 16385 2 9606 Homo sapiens -0.017263996972246787 GMYDGPVFDLTTTPK Oxidation (M) 1656.7705 0.77052392 1217 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;B4DLZ4;H0YBT4 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 1 0 6.5 0.5 1 1 59.247 59.304 3 1.458E-05 17503 20230619_1887_Aki_TMTPro18x_K_F7 105.99 101.1 109140 99074 113670 126370 124390 118960 108900 111700 122550 133240 117460 111270 140130 108510 121360 154200 120710 130810 101020 90895 115290 125260 127790 120750 111180 115210 124040 132830 121710 113930 141330 114480 123890 152810 115570 124460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 498110000 10682 1217 10094 20437;20438 16386;16387 16387 751 2 9606 Homo sapiens -0.03159052010391861 GMYDGPVYEVPATPK Oxidation (M) 1638.76 0.75995923 3880;2441 B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 no no 0 1 0 5.5 0.5 1 1 51.837 51.912 3 0.00061086 14791 20230619_1886_Aki_TMTPro18x_K_F6 78.809 66.644 45589 42813 43866 46328 41650 50539 48173 49409 55238 62740 60128 60261 62677 57667 57744 65360 68267 65357 42180 39213 44692 46572 43659 50767 48429 50901 56113 62609 61575 61193 63692 59964 59425 65540 65195 62087 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 477210000 10683 2441;3880 10095 20439;20440 16388 16388 1507 1 9606 Homo sapiens -0.03387034664820021 GMYDGPVYEVPATPK Unmodified 1622.765 0.76504461 3880;2441 B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 no no 0 0 0 6.5 0.5 1 1 55.208 55.284 3 0.00032274 16126 20230619_1886_Aki_TMTPro18x_K_F6 77.776 60.27 139830 155900 173810 184280 96525 149620 102930 141100 121780 270480 207890 260980 270820 222750 195430 267110 247150 305010 129850 142830 172620 183340 106840 153710 104370 148150 127200 265830 212270 263720 270770 233510 203320 269590 236370 289080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 373940000 10684 2441;3880 10095 20441;20442 16389;16390 16389 2 9606 Homo sapiens -0.021427308021884528 GNAAVLDYCR Unmodified 1137.5237 0.52369213 4450 Q9BV81 EMC6 ER membrane protein complex subunit 6 yes yes 0 0 0 6 0 1 42.737 42.831 2 3.4467E-05 10591 20230619_1886_Aki_TMTPro18x_K_F6 152.97 111.52 64966 58411 60682 69313 86849 104030 84579 83500 107110 33418 32800 33386 36049 30690 44347 39665 47676 30693 60076 53552 62466 69534 88186 102050 86019 85372 104660 36617 37324 33862 37133 32206 45099 39235 45466 29310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97794000 10685 4450 10096 20443 16391 16391 1 9606 Homo sapiens -0.03956876927964004 GNAAWQEQLK Unmodified 1143.5673 0.5672715 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5;V9GZ76 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 6.5 0.5 2 2 47.778 47.862 2;3 1.0054E-05 12599 20230619_1887_Aki_TMTPro18x_K_F7 188.87 125.39 332040 300470 317920 327620 337940 400550 394180 375830 431290 314700 326850 286640 308790 247420 395160 355860 355680 261640 307120 275260 324570 329710 351180 398930 395210 384010 432710 320680 339440 291280 319760 262190 397870 350760 340040 249850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 430240000 10686 3402 10097 20444;20445;20446;20447 16392;16393 16393 2 9606 Homo sapiens 0.001230558408451543 GNAGGIQPDLLISLTAPK Unmodified 1763.9781 0.97814893 2564 B4DP80;Q8NCW5;Q8NCW5-2 APOA1BP NAD(P)H-hydrate epimerase yes no 0 0 0 2.5 0.5 1 1 63.128 63.148 3 0.00023177 20053 20230619_1881_Aki_TMTPro18x_K_F2 76.151 68.046 16316 17381 15779 20020 15265 25812 20439 29691 20204 17123 24675 36070 36637 21221 19711 31512 17130 47041 15112 15922 16106 20079 16102 25720 20327 29703 20760 18529 25688 35248 36125 22980 20276 32320 16621 44405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125090000 10687 2564 10098 20448;20449 16394 16394 1 9606 Homo sapiens 0.12671898249186597 GNAGQSNYGFANSAMER Oxidation (M) 1788.7486 0.7485597 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 1 0 5.5 0.5 1 1 39.051 39.138 3 1.473E-09 9138 20230619_1885_Aki_TMTPro18x_K_F5 135.55 123.79 104960 89091 106700 105160 93151 107980 110330 105830 114670 126350 143940 137650 139980 115550 126790 145510 130230 126260 97089 81692 108030 104950 98309 108930 110440 108840 117760 126900 146080 138530 142320 121480 129460 144630 124540 120140 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 667510000 10688 3606 10099 20450;20451 16395;16396;16397 16395 2278 3 9606 Homo sapiens -0.11426463706197865 GNAGQSNYGFANSAMER Unmodified 1772.7536 0.75364508 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 5.5 0.5 1 1 43.623 43.715 2;3 1.171E-30 11116 20230619_1886_Aki_TMTPro18x_K_F6 296.22 262.36 42588 36328 43466 42589 24358 35670 33971 37511 36973 61342 56375 58943 64339 51646 46853 66762 60216 62792 39397 33308 43791 42425 27140 36631 33850 38830 38376 60593 57273 59680 64559 54327 48800 66565 57503 59673 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86701000 10689 3606 10099 20452;20453 16398;16399 16399 2 9606 Homo sapiens -0.10182159843589034 GNAMVEEGHFAAEDVK Oxidation (M) 1718.757 0.75699912 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 1 0 2 0.816 1 1 1 42.656 42.704 3 1.5272E-06 11083 20230619_1881_Aki_TMTPro18x_K_F2 117.78 100.3 94476 74389 82261 102750 105820 92598 116130 99106 124630 119550 127790 130490 124870 110340 125500 132580 137270 153370 87245 68342 85044 101260 108150 94611 116690 101420 126600 120060 130870 131290 127600 115670 128300 134010 131340 145400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 250110000 10690 1022;3868 10100 20454;20455;20456 16400 16400 588 1 9606 Homo sapiens -0.07362909789594596 GNAMVEEGHFAAEDVK Unmodified 1702.7621 0.7620845 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 46.688 46.766 3 5.6623E-12 12941 20230619_1881_Aki_TMTPro18x_K_F2 167.82 144.34 438690 334490 424210 438640 321670 438700 449270 418570 490180 552920 515700 534160 586050 499610 534920 601580 632130 669350 405360 307170 430800 434400 346340 442930 446950 432740 498440 550980 531170 541860 593570 522070 550570 606460 604140 634900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 509620000 10691 1022;3868 10100 20457;20458 16401;16402 16401 2 9606 Homo sapiens -0.06118605926963028 GNCLPPLPLPR Unmodified 1232.67 0.66996244 4587 Q9NRX2;E9PKV2 MRPL17 39S ribosomal protein L17, mitochondrial yes no 0 0 0 3 0 1 55.795 55.836 2 0.019139 16759 20230619_1882_Aki_TMTPro18x_K_F3 85.676 62.119 42773 35009 41062 47557 47832 54810 54287 53926 59482 50512 57924 57164 61508 45398 48524 64768 63411 59275 39538 32153 42006 47076 49337 54835 54513 55061 60208 51441 59642 57372 62013 48259 50481 64416 60499 56373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45061000 10692 4587 10101 20459 16403 16403 1 9606 Homo sapiens 0.06293425307967482 GNCVSLLSPSPEGDPR Unmodified 1683.7886 0.7886336 499 Q5T9B9;A8K2X4;A0A024R878;P17813-2;P17813;Q96CG0;F5GX88;B7Z6Y5;B4DTC8;Q53G87;B4DYI8 ENG Endoglin yes no 0 0 0 4.5 0.5 1 1 48.569 48.626 3 5.2483E-06 13344 20230619_1883_Aki_TMTPro18x_K_F4 111.78 91.67 116070 89127 110030 107800 119800 143320 153100 150060 210850 136370 146910 168600 145510 132900 169660 144840 168850 181500 107240 81776 112460 107840 124750 142340 154100 152440 208700 139670 153880 168410 149800 138900 171910 147490 161650 171960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155780000 10693 499 10102 20460;20461 16404;16405 16404 2 9606 Homo sapiens -0.025909170356726463 GNDESAGLDRR Unmodified 1188.5483 0.54832698 542 A0A024R8V6;Q9P275;B3KMW2;A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 0 0 1 1.5 0.5 1 1 27.771 27.81 3 2.5356E-06 5237 20230619_1880_Aki_TMTPro18x_K_F1 142.1 111.53 11203 7308.9 14718 11936 18715 17784 14113 16659 14436 12475 19050 21562 17402 15139 16640 6182.1 18827 16136 10373 6733.9 14696 11750 18966 17512 14524 16975 14862 13104 19274 21230 17775 15361 16994 6952.7 17974 15230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7264600 10694 542 10103 20462;20463 16406;16407 16406 2 9606 Homo sapiens -0.03840525520877236 GNDISSGTVLSDYVGSGPPK Unmodified 1948.9378 0.93780026 2861 D9IAI1;P30086;A0A0K0K1J6;B4DRT4;V9HW05 HEL-S-34;PEBP1;HEL-210 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 6.6 1.02 1 1 2 1 57.354 57.414 2;3 4.4263E-45 16769 20230619_1887_Aki_TMTPro18x_K_F7 303.13 278.87 380580 435980 376390 441240 451000 579030 562940 423480 471640 407940 512110 594720 570920 432800 582900 591330 634020 731240 352760 398850 384470 446970 465820 571500 557870 443510 486940 418950 526930 589850 581080 460490 595410 599380 606800 692700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6268299999.999999 10695 2861 10104 20464;20465;20466;20467;20468 16408;16409;16410 16409 3 9606 Homo sapiens 0.0012888706808098505 GNDPLTSSPGR Unmodified 1099.5258 0.52580062 2702 B7Z8Z6;P49736;B3KXZ4;F8WDM3;C9J013;C9JZ21 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 3.5 0.5 1 1 36.457 36.508 2 1.7308E-08 8128 20230619_1883_Aki_TMTPro18x_K_F4 196.88 165.12 54206 42086 53011 55794 68459 77056 74050 66436 99664 59928 74058 76024 63031 64371 65404 67767 87664 73529 50097 38649 54215 55481 70088 76042 75064 68445 98894 61500 76719 76059 64909 66909 67700 68371 83563 69829 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91012000 10696 2702 10105 20469;20470 16411;16412 16412 2 9606 Homo sapiens -0.0199812491848661 GNDPNVNIVPK Unmodified 1165.6091 0.60913632 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-3 PRRC2C Protein PRRC2C yes no 0 0 0 6 0 1 46.653 46.736 2 0.0001047 12455 20230619_1886_Aki_TMTPro18x_K_F6 125.97 94.035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10697 2894 10106 20471 16413 16413 1 9606 Homo sapiens 0.032956115293927724 GNDTFVTLDEILR Unmodified 1491.7569 0.75692277 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2;Q05D78;Q9BS79;F5GXT0;F5H742;A0A0S2Z438;F5H256 MRE11A Double-strand break repair protein MRE11A yes no 0 0 0 5 0 1 63.416 63.462 2 0.00024895 19507 20230619_1885_Aki_TMTPro18x_K_F5 130.56 105.18 56897 53975 64496 63568 50897 62903 62089 56459 68642 70882 69320 71980 77948 59631 77168 85728 78365 84736 52722 49472 64681 63415 54276 63511 62178 58544 69613 70897 71504 72618 79200 63331 78599 85641 75012 80470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130090000 10698 229 10107 20472 16414 16414 1 9606 Homo sapiens 0.030714582727114248 GNDTPLALESTNTEK Unmodified 1588.758 0.75804498 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 2.5 0.5 1 1 48.647 48.719 3 1.1748E-07 13583 20230619_1882_Aki_TMTPro18x_K_F3 127.66 110.6 191390 150020 183590 191360 191020 225230 193090 189180 242530 194670 189510 203850 212140 171830 167650 249990 243910 244210 176870 137710 187310 190270 198090 224310 196090 195940 242100 196860 197970 205520 213750 182470 175930 249360 232630 232020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154940000 10699 594 10108 20473;20474 16415;16416 16416 2 9606 Homo sapiens -0.012783721490222888 GNDVAFHFNPR Unmodified 1272.6 0.59996862 386 Q86TY5;Q6FGL0;A0A024R693;Q59FR8;P17931;G3V3R6;Q6NVH9 LGALS3;hCG_22119 Galectin;Galectin-3 yes no 0 0 0 7 0 1 42.597 42.672 3 0.00024658 10364 20230619_1887_Aki_TMTPro18x_K_F7 95.018 87.107 38042 28356 30639 36955 48061 49995 51189 49713 65507 44845 47173 54419 58886 44005 39986 63428 54623 57829 35101 26040 32049 36774 48639 49555 51824 50667 65141 45911 49800 54476 58812 46772 41932 63039 52144 54974 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32327000 10700 386 10109 20475 16417 16417 1 9606 Homo sapiens -0.025427370363104274 GNECFQK Unmodified 881.37015 0.3701516 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 4.5 0.5 1 1 39.028 39.095 2 0.034163 9143 20230619_1885_Aki_TMTPro18x_K_F5 93.374 22.684 207580 101930 276240 268520 318470 347480 269440 334160 288920 224310 380040 443870 307720 343210 343800 134180 454050 403100 191990 94822 275460 258220 325920 344690 275480 339250 296410 239250 382980 436680 318670 346170 353820 154010 433020 380200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 194580000 10701 2088 10110 20476;20477 16418 16418 1 9606 Homo sapiens -0.07527866973589425 GNEEAQIFRPLK Unmodified 1400.7412 0.74121312 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 1 7.5 0.5 1 1 49.054 49.129 3 7.1377E-07 13165 20230619_1888_Aki_TMTPro18x_K_F8 159.5 130.73 1281100 1048200 1223900 1306800 1306200 1488100 1300000 1303400 1600900 1513900 1578700 1519400 1554800 1440600 1475300 1742900 1596800 1690400 1184200 961780 1249800 1300700 1351100 1486800 1320700 1350000 1613100 1519400 1619400 1540100 1584700 1504000 1509800 1742900 1527200 1605800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1737699999.9999998 10702 2436 10111 20478;20479 16419;16420 16420 2 9606 Homo sapiens 0.05687216546334639 GNEFEDYCLK Unmodified 1273.5285 0.52850274 2256 P26196;B2R858;Q8IV96 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 0 3.8 0.748 2 2 1 52.684 52.731 2;3 0.002404 15236 20230619_1883_Aki_TMTPro18x_K_F4 82.171 68.743 486480 344530 394790 504890 363190 504130 491740 440390 546760 545680 485260 540720 597590 521280 443490 686290 618060 601780 448760 316880 409030 496310 384270 507960 489880 457420 551690 545850 505950 548530 599340 546900 464650 681550 589550 572530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 441730000 10703 2256 10112 20480;20481;20482;20483;20484 16421;16422 16422 2 9606 Homo sapiens -0.09732037575849972 GNEFEDYCLKR Unmodified 1429.6296 0.62961376 2256 P26196;B2R858;Q8IV96 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 1 5 0 1 46.108 46.185 3 4.9496E-05 12114 20230619_1885_Aki_TMTPro18x_K_F5 133.49 106.35 141100 160670 174490 144600 162210 150110 178700 159500 120690 157580 161770 90448 122180 82609 177470 79566 78731 54782 131050 146860 174080 147660 169390 151810 177530 162260 128010 157190 161980 94719 128260 85440 173500 78975 76118 52382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164030000 10704 2256 10113 20485 16423 16423 1 9606 Homo sapiens -0.06801585873154181 GNEFFCEVDEDYIQDK Unmodified 2006.8204 0.82038724 3202 P67870;Q5SRQ6;N0E4C7;A0A1U9X7J2;A0A7I2YQ78;Q5SRQ3;N0E472;N0E638;A0A0G2JM12;N0E466;N0E650;A0A7I2V500;N0E644;A0A0G2JM58;B4DUJ4;N0E6J1;A0A7I2YQQ2 CSNK2B;CSNK2B-LY6G5B-1181;CSNK2B-LY6G5B--991;CSNK2B-LY6G5B-562;CSNK2B-LY6G5B-560;CSNK2B-LY6G5B-1072 Casein kinase II subunit beta yes no 0 0 0 2 1 1 1 62.034 62.049 3 9.5564E-16 19306 20230619_1880_Aki_TMTPro18x_K_F1 193.31 189.47 186000 148600 164380 186360 149560 169930 168640 169350 192570 192490 186450 187970 208070 171090 189440 230360 188620 216300 171800 136370 168680 184870 157150 173070 169730 173720 194660 193160 192550 190520 210740 180190 193160 229620 180670 205490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 371650000 10705 3202 10114 20486;20487 16424;16425 16424 2 9606 Homo sapiens -0.14275013863016284 GNEIVLSAGSTPR Unmodified 1299.6783 0.67827852 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5.5 1.5 1 1 2 2 1 1 44.101 44.171 2;3 4.0157E-11 11303 20230619_1886_Aki_TMTPro18x_K_F6 200.93 163.37 195000 158840 190540 194350 203890 213310 213980 214440 300800 204510 203780 215300 231820 179810 213340 233530 229320 231060 180270 145720 194130 193650 211070 214330 217780 218730 297400 207740 214940 216900 234770 189560 218260 233620 219270 219490 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 636960000 10706 3881 10115 20488;20489;20490;20491;20492;20493;20494;20495 16426;16427;16428;16429 16427 4 9606 Homo sapiens 0.04042650758265154 GNEMSEVLR Oxidation (M) 1049.4812 0.48115861 3566 P38606-2;P38606;A0A994J738 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 1 0 1.5 0.5 1 1 34.1 34.128 2 0.0081579 7351 20230619_1881_Aki_TMTPro18x_K_F2 83.869 60.075 75724 49441 67286 76656 75951 77984 74584 77786 94454 89371 104610 108050 98876 92104 93105 92033 111530 125640 69867 45521 69227 75155 78176 78738 75918 79799 95479 90276 106610 108270 100880 95539 95790 94371 106630 118930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78928000 10707 3566 10116 20496;20497 16430 16430 2234 1 9606 Homo sapiens -0.04160272056174108 GNERPIPFDHMMYEHLQK Unmodified 2241.0459 0.045927695 1510 A0A3B3ISJ2;Q96KQ4;G3V3S2;G3V5J1 PPP1R13B Apoptosis-stimulating of p53 protein 1 yes no 0 0 1 8 0 1 47.83 47.888 5 0.00011145 12652 20230619_1888_Aki_TMTPro18x_K_F8 92.492 77.238 30706 22861 25694 28934 28954 30634 28325 29647 37138 28745 28451 29968 31841 24834 30308 36733 32165 32201 28338 20988 26582 28741 29818 30829 28867 30332 36974 29151 29760 30209 32309 26418 30984 36448 30758 30633 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21017000 10708 1510 10117 20498 16431 16431 1 9606 Homo sapiens -0.024953431539870508 GNEYQPSNIK Unmodified 1148.5462 0.54620171 457 M0R226;A0A024R7J4;Q9BQ48 MRPL34 Ribosomal protein L34;39S ribosomal protein L34, mitochondrial yes no 0 0 0 5.5 0.5 1 1 41.313 41.403 3 0.00054232 10140 20230619_1885_Aki_TMTPro18x_K_F5 99.788 78.392 117980 83911 109230 125720 163060 143260 138980 137670 150900 125970 162220 149610 164220 137700 161040 133610 165940 153150 108930 77196 112560 123690 164190 143460 141890 140740 153430 128710 165940 150470 167360 142240 163910 135540 158630 145310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87810000 10709 457 10118 20499;20500 16432;16433 16432 2 9606 Homo sapiens -0.022129542586753814 GNFGGSFAGSFGGAGGHAPGVAR Unmodified 2033.9456 0.94562002 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 4.33 1.25 1 1 1 48.404 48.47 3 5.544E-63 13248 20230619_1886_Aki_TMTPro18x_K_F6 271.66 258.48 377680 304750 344610 443330 381660 425380 439070 426970 409950 475990 480970 451900 532920 382380 415500 507010 602010 550860 348950 280120 354020 435820 394970 431420 438520 437510 422500 477470 492140 457660 536340 403790 435330 509630 573840 522930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 946010000 10710 3631 10119 20501;20502;20503 16434;16435;16436 16436 3 9606 Homo sapiens -0.029994961011425403 GNFILSAGVDK Unmodified 1119.5924 0.59242362 4477 Q9BZK7;C9JLJ1;B7Z475;A0A0D9SF63;A0A1B0GVH3 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes no 0 0 0 8 0 1 55.85 55.912 3 0.0003016 16060 20230619_1888_Aki_TMTPro18x_K_F8 88.021 60.008 50215 44758 54481 49205 48729 56907 59743 49434 60921 45783 51263 48832 53091 45263 57322 58888 55145 54422 46491 41006 54879 49455 51365 56796 59621 50957 61554 46599 53139 49359 54332 47519 58103 58706 52778 51740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63300000 10711 4477 10120 20504 16437 16437 1 9606 Homo sapiens 0.03741110643431966 GNFLEIK Unmodified 819.44905 0.44905385 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8Y7I0;A0A2R8Y7M9 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 0 7.5 0.5 1 1 54.302 54.37 2 0.0063643 15468 20230619_1888_Aki_TMTPro18x_K_F8 133.6 59.984 710200 652890 708970 759500 706580 861270 857460 792240 931250 946350 891620 877760 974390 787110 857100 1060200 955710 953700 657200 598420 720770 759670 738750 861550 857940 818350 943330 946140 920200 891360 986090 829480 880190 1054400 913450 906970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1116400000 10712 1005 10121 20505;20506 16438 16438 1 9606 Homo sapiens 0.03210728323006151 GNFNYIEFTR Unmodified 1259.5935 0.59348625 3147 Q53HL1;J3QRS3;P19105;O14950 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 0 0 0 4.5 3.5 1 1 55.081 55.115 2 3.0446E-05 16478 20230619_1880_Aki_TMTPro18x_K_F1 155.06 123.69 144830 118550 144830 135780 137300 149450 167930 165210 194870 175480 160650 186750 213630 177690 198510 261880 220120 269150 133920 108690 146970 135980 144030 150480 168360 167940 195670 177180 168980 188880 215670 188080 203680 261980 210740 255380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 298020000 10713 3147 10122 20507;20508 16439;16440 16439 2 9606 Homo sapiens -0.025926749876816757 GNFSSFMQK Unmodified 1044.4699 0.46986564 3806 Q06210-2;Q06210;A0A6I8PRN4;A0A6I8PTT9 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 0 3 0 1 53.65 53.703 2 0.00016085 15822 20230619_1882_Aki_TMTPro18x_K_F3 145.72 48.776 60873 56250 64953 54612 53692 72995 64713 66589 87652 30815 22755 26040 25635 21526 40665 29532 31475 26935 56365 51475 65427 55590 57094 72255 65297 67497 85232 33026 26586 26517 26815 22780 40515 29439 30173 25627 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19646000 10714 3806 10123 20509 16441 16441 1 9606 Homo sapiens -0.05059049359647361 GNGPLPLGGSGLMEEMSALLAR Unmodified 2169.0922 0.092209186 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A8Q3WLE0;Q6ZSB8;Q6ZT55 ENAH Protein enabled homolog yes no 0 0 0 2 0 1 66.359 66.366 3 9.8682E-06 21397 20230619_1881_Aki_TMTPro18x_K_F2 93.583 83.834 3981.8 2521.6 2772.4 2285.5 3127.5 3204.1 3237.4 3612.3 2453.7 4157.7 4932.9 5186.6 5179.5 2841.1 4733.2 3639.1 3343.9 3895.3 3667.4 2309.9 2918.8 2343.8 3222.4 3182 3237.4 3673.9 2649 4196.7 4957.5 5135.7 5242.3 3056.7 4738.3 3662.4 3216.7 3695 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7445100 10715 918 10124 20510 16442 16442 1 9606 Homo sapiens 0.054426769575002254 GNHAAFQADVSEAR Unmodified 1471.6804 0.68040378 1297 A0A1U9X7U3;A0A1U9X7U8;Q92506 HSD17B8 Estradiol 17-beta-dehydrogenase 8 yes no 0 0 0 3 0 1 34.686 34.747 3 2.0186E-16 7470 20230619_1882_Aki_TMTPro18x_K_F3 164.92 143.97 45088 30823 44955 45143 50556 52005 52347 52650 82373 51274 59823 63722 62766 56884 56786 56092 74724 63307 41648 28353 45760 44496 52144 52073 53579 53706 81206 52343 62582 63880 63737 58846 58826 56797 71243 60095 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40639000 10716 1297 10125 20511 16443;16444 16443 2 9606 Homo sapiens -0.0365692050393136 GNHCEYCFTR Unmodified 1342.5183 0.51828918 3119 I6L9D1;Q9NRG4;Q9NRG4-2 SMYD2 N-lysine methyltransferase SMYD2 yes no 0 0 0 5.5 0.5 1 1 33.75 33.813 3 0.00054635 7187 20230619_1886_Aki_TMTPro18x_K_F6 99.568 93.265 18068 9924 15828 18852 20488 22413 21634 22933 28183 26031 23462 24077 29457 22671 20390 29164 29580 22609 16655 9171.1 16355 18334 20957 22390 21942 23464 28163 26088 24549 24487 29439 23778 21446 28813 28165 21570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63850000 10717 3119 10126 20512;20513 16445 16445 1 9606 Homo sapiens -0.1392692378205993 GNHDGAVQQYIR Unmodified 1356.6535 0.65346075 848 B7Z879;Q658K0;Q53FX3;A0A087WXL6;Q9H270;B3KPS8;A0A087X2J4 VPS11;DKFZp564P2364 Vacuolar protein sorting-associated protein 11 homolog yes no 0 0 0 5.5 0.5 1 1 35.129 35.2 3 3.3845E-18 7702 20230619_1886_Aki_TMTPro18x_K_F6 233.32 210.44 26104 9573.7 23522 25184 31744 29430 28593 28890 37093 25285 30871 27182 28355 24395 29406 24759 26416 26114 24035 8924.1 24236 24175 32214 29407 29268 29453 37017 25829 31834 27429 29067 25276 29692 24971 25301 24790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62851000 10718 848 10127 20514;20515 16446 16446 1 9606 Homo sapiens -0.010599843244335716 GNHECASINR Unmodified 1156.5044 0.50435367 3705;3704;685 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;B4DJ75;B7ZB67;H0Y3Y6;C9JP48;B4E163;P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;E9PMD7;B3KXM2;P62136-3;A0A024RBP2;F8W0W8;P36873;P36873-2;Q9UPN1;F8VYE8;F8VR82;A0A087WYY5 HEL-S-80p;PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 3.5 0.5 1 1 23.01 23.119 3 0.052723 3778 20230619_1882_Aki_TMTPro18x_K_F3 45.764 28.822 131100 91981 128390 148410 185100 168070 153490 192260 200400 161340 215160 193830 188200 167040 179400 182120 226770 209910 121090 84704 131570 145430 186720 169010 158130 193790 201910 165710 218700 194540 192600 173980 185200 184330 216400 199140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227990000 10719 3705;3704;685 10128 20516;20517 16447 16447 1 9606 Homo sapiens -0.06763833218838045 GNHHEFVSLVK Unmodified 1265.6517 0.65166983 252 Q4G0F5;A0A024R3L9 VPS26B Vacuolar protein sorting-associated protein 26B yes no 0 0 0 7.5 0.5 1 1 40.476 40.506 4 0.00010919 9653 20230619_1888_Aki_TMTPro18x_K_F8 124.1 82.102 133270 44665 94881 129090 136710 88246 144060 144480 159580 168460 173220 183730 184070 161300 108280 185620 131120 204290 122480 41753 100350 122740 138480 93635 145260 144390 162320 169340 177510 185030 183930 168410 113160 186950 125740 193570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136640000 10720 252 10129 20518;20519 16448;16449 16448 2 9606 Homo sapiens 0.029470066576095633 GNIDGNVSCSENLVANTAR Unmodified 1989.9174 0.91741594 4297 Q92576-2;Q92576 PHF3 PHD finger protein 3 yes no 0 0 0 4 0 1 47.59 47.63 3 1.3033E-10 12926 20230619_1883_Aki_TMTPro18x_K_F4 99.963 90.042 106720 89041 96608 114740 103380 108870 119180 115360 126680 137660 141640 108760 140590 113340 134710 139540 144320 102330 98614 81723 99192 113670 107240 110700 119480 118010 129280 137040 144360 112010 143190 118150 137630 137730 137700 97742 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41602000 10721 4297 10130 20520 16450 16450 1 9606 Homo sapiens -0.03794606863334593 GNIFANLFK Acetyl (Protein N-term) 1064.5655 0.56548059 258 P84077;A0A024R3Q0;A0A8V8TQC0;A0A8V8TNZ5;A0A8V8TQP8;A0A8V8TNZ0;B4DN70;B4DEB9;B4DJC8;A0A8V8TP92;A0A8V8TP99;A0A8V8TPG9 ARF1 ADP-ribosylation factor 1 yes no 1 0 0 3 0 1 67.292 67.332 2 0.00040083 21462 20230619_1882_Aki_TMTPro18x_K_F3 70.912 48.083 34038 29741 33057 28702 27695 32986 27852 29749 37749 13285 12389 9489 14423 9026.1 20624 11671 9865 7909.9 31480 27220 33551 29159 29237 32966 28386 30174 36811 14242 13990 9814.1 14928 9478.7 20218 11507 9529.2 7559.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15041000 10722 258 10131 20521 16451 16451 1 9606 Homo sapiens 0.03578046822894976 GNIIISTPEK Unmodified 1070.5972 0.59717465 3312 O75643;A4FU77 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 7.5 0.5 1 1 49.276 49.36 2 0.00013611 13279 20230619_1888_Aki_TMTPro18x_K_F8 145.9 111.83 111110 82382 98985 115280 99294 123350 118250 117740 142010 133840 146490 149350 156240 131380 126630 162370 158040 149100 102590 75714 101690 113770 103790 123930 118860 121120 143480 134900 150500 150340 157760 137730 131210 161830 150840 141790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166220000 10723 3312 10132 20522;20523 16452;16453 16453 2 9606 Homo sapiens 0.06469994786198185 GNINICLMGDPGVAK Unmodified 1557.7643 0.76433311 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 4.5 3.5 1 1 58.307 58.307 2;3 1.2491E-08 17134 20230619_1888_Aki_TMTPro18x_K_F8 138.99 116.95 44468 37050 47450 44417 35159 47745 51227 47197 46240 50955 46205 62644 57862 44965 48880 47500 55686 58526 41146 33981 47766 44314 37960 47996 50577 48375 47426 51623 48038 62376 58232 47127 50228 48319 53233 55461 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253660000 10724 1091 10133 20524;20525 16454;16455 16455 2 9606 Homo sapiens 0.007761512771139678 GNKPWISLPR Unmodified 1166.656 0.65602693 2202 Q96IR1;B2R491;P62701;Q53HV1 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform yes no 0 0 1 6 0.816 1 1 1 49.323 49.403 3 0.00023099 13616 20230619_1886_Aki_TMTPro18x_K_F6 120.09 92.442 955880 846840 886880 865030 852880 1078000 1003400 1074500 1053400 671120 630690 416190 558110 401870 807500 617700 572790 282060 883800 775390 906230 875560 893770 1073700 1004600 1086600 1052300 692640 663010 434830 583250 426430 802640 599250 548300 272530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4237099999.9999995 10725 2202 10134 20526;20527;20528 16456;16457 16457 2 9606 Homo sapiens 0.07936515871188021 GNLANVIR Unmodified 855.49265 0.49265 3439;3388;1072 A0A0S2Z3H3;P12235;A8K787;V9GYG0;A0A0S2Z359;Q59EP7;Q9H0C2;P05141;Q6NVC0;O75961;P12236;Q6I9V5;Q59EI9 SLC25A4;SLC25A31;SLC25A5;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 0 0 2 0.816 1 1 1 43.506 43.557 2 0.00087907 11434 20230619_1881_Aki_TMTPro18x_K_F2 154.01 85.591 1738600 1359500 1567400 1713300 1721500 1933900 2005300 1978400 2409800 1606800 1599000 1416900 1635800 1279300 1646200 1712400 1883400 1344500 1605900 1247800 1610000 1704100 1784600 1939500 2017000 2008000 2397200 1639500 1679500 1443800 1668800 1347200 1687000 1693300 1796000 1282900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4622800000 10726 1072;3388;3439 10135 20529;20530;20531 16458;16459 16459 2 9606 Homo sapiens 0.05912337820143421 GNLEVVHHR Unmodified 1059.5574 0.55737552 1618 O95163;B4E3I9;A0A6Q8PHC9;Q4LE38;Q8N516;A0A6Q8PFH9;F5H2T0;B3KXE7;A0A6Q8PF66;A0A6Q8PGW3;A0A6Q8PHF4;A0A6Q8PG86;A0A6Q8PEX6;A0A6Q8PFB7;A0A6Q8PHI5;A0A6Q8PH48;Q68DI5;A0A6Q8PFN8;A0A6Q8PHA0;A0A6Q8PGR0;A0A6Q8PF69 IKBKAP;IKBKAP variant protein;DKFZp781H1425 Elongator complex protein 1 yes no 0 0 0 5 0 1 27.699 27.771 3 2.003E-06 4909 20230619_1885_Aki_TMTPro18x_K_F5 163.94 134.27 11943 8751.9 10132 12215 15232 11450 10479 15383 17940 12649 14006 13793 12836 12814 12827 12976 14633 12149 11022 8043.8 10522 12041 15269 11737 11081 15356 17684 12970 14500 13921 13154 13248 13143 12994 13966 11557 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15285000 10727 1618 10136 20532 16460 16460 1 9606 Homo sapiens 0.029979126261423517 GNLGAGNGNLQGPR Unmodified 1323.6644 0.66435979 1059 P43243;A8MXP9;A0A0R4J2E8;D6REM6;D6R991;H0Y8T4;P43243-2;B4DRS1;B3KM87;Q5CZA7;B4DF66;D6RE02;D6RBI2;D6RAY2;D6RAM9;D6RIA2 MATR3;DKFZp686K0542 Matrin-3 yes no 0 0 0 7.33 0.471 2 1 37.535 37.56 2 5.7006E-12 8490 20230619_1888_Aki_TMTPro18x_K_F8 236.35 209.09 30097 21539 27938 34239 40620 50675 38852 39317 48368 35736 37503 30788 35627 29188 34140 38224 42820 25618 27792 19830 28800 33710 41206 49695 39551 40839 48269 36196 38862 31465 36358 30627 35237 37557 40766 24529 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36148000 10728 1059 10137 20533;20534;20535 16461;16462 16462 2 9606 Homo sapiens 0.015474180498358692 GNLGVYQETR Unmodified 1135.5622 0.56218613 31 Q5QTR6;A0A024QZC1;O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 yes no 0 0 0 5 0 1 40.034 40.124 2 3.8348E-07 9569 20230619_1885_Aki_TMTPro18x_K_F5 150.66 124.73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10729 31 10138 20536 16463 16463 1 9606 Homo sapiens -0.0001724802177704987 GNLNFTCDGNSVISPVGNR Unmodified 2019.9432 0.94323676 3924 Q15269;C9J544 PWP2 Periodic tryptophan protein 2 homolog yes no 0 0 0 1 0 1 53.941 53.941 3 0.016505 16000 20230619_1880_Aki_TMTPro18x_K_F1 49.417 39.837 112510 70215 106520 122000 120140 141360 124630 127870 143060 144570 163470 167880 145410 140300 153250 160900 158660 190660 103830 64760 109020 119090 123930 141060 126000 132010 145500 145910 166020 168430 149460 146680 156060 163000 151970 180660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33378000 10730 3924 10139 20537 16464 16464 1 9606 Homo sapiens -0.025937126210919814 GNLPTSGNISGFIR Unmodified 1431.747 0.74702678 1529 A0A3B3IUB9;A0A8V8TR92;A0A8V8TQB4;Q9NR09;Q9H8B7 BIRC6 Baculoviral IAP repeat-containing protein 6 yes no 0 0 0 3 0 1 54.067 54.119 2 3.5718E-06 16009 20230619_1882_Aki_TMTPro18x_K_F3 125.03 84.965 47195 34357 39951 41818 40566 55428 47100 39754 47874 56920 46705 49708 64145 51147 51770 67087 58886 63222 43555 31532 41222 41785 42359 54634 47123 42166 48764 56399 48760 50839 64309 53576 53338 66895 56303 60073 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30660000 10731 1529 10140 20538 16465 16465 1 9606 Homo sapiens 0.04842315057999258 GNLQNLER Unmodified 942.48829 0.4882929 575 A0A024R9I0;P21283;E7EV59;B7Z593 ATP6V1C1 V-type proton ATPase subunit C 1 yes no 0 0 0 4 0 1 38.165 38.208 2 0.00094009 8813 20230619_1883_Aki_TMTPro18x_K_F4 152.63 106.2 98165 76979 91398 101210 93643 102710 93966 99601 128620 115430 140290 124000 124380 102940 117280 144110 155590 135220 90695 70684 93490 100230 97174 103670 95840 102390 129450 116100 142550 124910 127130 109050 121640 143570 148360 128600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121990000 10732 575 10141 20539 16466 16466 1 9606 Homo sapiens 0.01474828606558276 GNLVDLITL Unmodified 956.55425 0.5542472 2478 C9J7E8;B4DG30;Q9UL63;Q9UL63-2 MKLN1 Muskelin yes no 0 0 0 7 0.816 1 1 1 66.655 66.683 2 0.015396 20796 20230619_1887_Aki_TMTPro18x_K_F7 75.38 57.344 17590 16980 14362 15849 15612 16707 17060 15141 17680 22057 15684 20055 18400 16699 16678 17516 18688 17951 16258 15532 14885 16121 16159 16810 17132 15766 17935 21853 16337 20300 18621 17378 17104 17615 17856 17048 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28192000 10733 2478 10142 20540;20541;20542 16467 16467 1 9606 Homo sapiens 0.0742322472875685 GNMNCGAFQAHQMR Oxidation (M) 1636.6657 0.66569847 89 H0Y612;A0A024R0F6;Q9UPN9-2;Q9UPN9;B4DXI9;B3KN30 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 0 1 0 8 0 1 31.896 31.901 3 3.7741E-05 6301 20230619_1888_Aki_TMTPro18x_K_F8 100.19 88.211 1818.9 1565.4 2068.7 855.11 2434.6 2929.4 2414.8 3393.8 2496.4 930.43 1694.9 2158.5 2452.7 2164.8 1670.5 3275.1 2643.3 2605.1 1684.4 1427.9 2079.5 955.01 2500.2 2815.4 2440.6 3363 2501.2 1111 1812.7 2141.7 2444.3 2288.8 1775 3230.8 2519.5 2481.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4843800 10734 89 10143 20543 16468 16468 43 1 9606 Homo sapiens -0.12716775239596245 GNNNVMSNYEAYKPSTGAMGDR Unmodified 2375.027 0.027042747 4199 Q86XP3;Q86XP3-2;B3KTL4;T2DQ69;B3KV84;B3KMI4 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 0 1 8 0 1 48.709 48.775 3 5.9568E-12 13014 20230619_1888_Aki_TMTPro18x_K_F8 124.86 115.91 17400 12215 17061 20948 13633 22223 18800 20271 18346 22894 23704 21414 24632 20901 23655 22217 20735 19601 16073 11258 17341 20434 14623 22297 18656 20912 18945 22944 24097 21793 25053 21645 23902 22169 19859 18649 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18214000 10735 4199 10144 20544 16469 16469 1 9606 Homo sapiens -0.10546969306324172 GNNVLYISTQK Unmodified 1235.651 0.65100113 3717 P62312 LSM6 U6 snRNA-associated Sm-like protein LSm6 yes yes 0 0 0 2 0 1 50.225 50.277 3 0.00023371 14560 20230619_1881_Aki_TMTPro18x_K_F2 108.35 91.716 231780 197460 238630 243550 235580 244320 242270 219300 284690 263560 320640 282740 294680 269660 235790 324190 298120 288390 214430 181130 241790 242200 245020 246510 245260 227090 288910 264690 325790 285980 298930 281310 244740 322670 284570 274330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 581990000 10736 3717 10145 20545 16470 16470 1 9606 Homo sapiens 0.042601672178761874 GNNVYCLDR Unmodified 1109.4924 0.492392 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 5 0.816 1 1 1 40.028 40.102 2 0.00014365 9549 20230619_1885_Aki_TMTPro18x_K_F5 148.52 131.98 209080 165170 193310 200090 227210 257760 247640 233140 269480 188450 206390 171690 184600 144230 218520 211620 213640 167400 193170 151530 198270 199960 233960 255670 249080 238670 270490 192490 213630 174380 190660 153250 221290 209130 204140 159630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 231170000 10737 3647 10146 20546;20547;20548 16471 16471 1 9606 Homo sapiens -0.0579744996205136 GNPFRPDDDGIFVTR Unmodified 1704.822 0.82198264 1827 Q96RT1-8;Q96RT1;A0A8V8TN18;A0A8V8TML4;A0A8V8TPC7;A0A8V8TP09;A0A8V8TN23;Q1RMC9;H0YA04;A0A8V8TML6;Q96RT1-2;Q96RT1-9;Q96RT1-3;Q96RT1-5;Q96RT1-7;B4DIP2 ERBB2IP Protein LAP2 yes no 0 0 1 6 0 1 52.061 52.138 3 0.0040031 14822 20230619_1886_Aki_TMTPro18x_K_F6 65.511 46.887 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10738 1827 10147 20549 16472 16472 1 9606 Homo sapiens -0.002235472014717743 GNPTVEVDLFTSK Unmodified 1405.7089 0.70890994 293 A0A024R4F1;P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8Y798;A0A2R8YEG5 ENO1 Alpha-enolase;Enolase yes no 0 0 0 6.4 1.02 1 2 1 1 59.301 59.354 2;3 1.1173E-68 17625 20230619_1885_Aki_TMTPro18x_K_F5 340.88 70.968 1429400 1131100 1269900 1398200 1183700 1402000 1418600 1467500 1446200 1752900 1817400 2803100 850790 2486400 736130 3087800 751800 2141700 1320300 1037900 1302900 1390200 1243500 1418800 1418400 1502900 1486800 1787400 1811000 2785800 905540 2595800 765670 3033700 728790 2039100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 14725000000 10739 293 10148 20550;20551;20552;20553;20554 16473;16474;16475;16476 16473 4 9606 Homo sapiens 0.02228384352656576 GNPTVEVDLYTAK Unmodified 1405.7089 0.70890994 3418 Q6FHV6;P09104;A8K3B0;P09104-2;F5H0C8;F5H1C3 ENO2 Gamma-enolase;Enolase yes no 0 0 0 5 0 1 53.982 54.052 2 3.411E-12 15490 20230619_1885_Aki_TMTPro18x_K_F5 164.04 26.143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10740 3418 10149 20555 16477 16477 1 9606 Homo sapiens 0.022283843526793135 GNQIFVR Unmodified 832.45554 0.45553621 923 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;Q9Y655;A0A087WUT0;A0A024R5Q6;A0A0C4DGV1;H0YN19;Q9P2K5-3;H0YKS1 MYEF2 Myelin expression factor 2 yes no 0 0 0 1 0 1 40.531 40.531 2 0.0077204 10321 20230619_1880_Aki_TMTPro18x_K_F1 122.98 93.83 207430 169990 209840 204480 165100 186040 193140 206700 239890 150590 172620 153930 147770 131900 186880 166330 193690 152550 191830 155920 212240 203520 175870 190000 194660 208270 238690 155420 179140 155540 153560 138550 189590 165900 184970 145190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175070000 10741 923 10150 20556 16478 16478 1 9606 Homo sapiens 0.032606662743773995 GNRPAILTYHDVGLNHK Unmodified 1904.0017 0.0016783401 414 Q9ULP0-6;Q9ULP0-3;H3BQJ4;A0A0S2Z5L7;A0A0S2Z5R7;Q9ULP0-8;A0A024R6V8;Q9ULP0-7;Q9ULP0-4;Q9ULP0;Q9ULP0-2;H3BQ86;H3BRT9;H3BNE7;H3BPH8;H3BM40;H3BN97;H3BNX9;H3BNK4;H3BNQ1;H3BR92;H3BU08;H3BMR6;H3BN53;H3BVF3 NDRG4 Protein NDRG4 yes no 0 0 1 2 0.816 1 1 1 41.436 41.481 5 4.7524E-18 10227 20230619_1882_Aki_TMTPro18x_K_F3 176.49 146.8 71877 58471 72628 101940 50306 51924 69420 78139 86926 76899 63858 55606 82388 59372 57154 81836 76533 74618 66466 53869 73545 98641 54524 56863 69467 78032 86653 77132 67331 57601 82255 62374 59765 81393 73026 70956 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157300000 10742 414 10151 20557;20558;20559 16479 16479 1 9606 Homo sapiens 0.08583756806342535 GNSIIMLEALER Unmodified 1344.7071 0.7071358 2167 P62308;A8MWD9;Q49AN9;F5H013 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 yes no 0 0 0 6 0 1 61.659 61.713 2 0.00017854 18881 20230619_1886_Aki_TMTPro18x_K_F6 127.34 75.349 123880 118660 145720 148020 131710 169780 151650 144520 175100 166580 161110 148250 166170 134090 177930 155220 156660 168270 114840 108820 146050 147340 138600 169390 152500 149990 176510 166660 166150 150860 169920 139990 179430 156450 150180 159640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 321060000 10743 2167 10152 20560 16480 16480 1 9606 Homo sapiens 0.048570520630619285 GNSIIMLEALERV Unmodified 1443.7755 0.77554972 2167 P62308;A8MWD9;Q49AN9;F5H013 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 yes no 0 0 1 6.5 0.5 1 1 63.781 63.819 2 1.4168E-11 19554 20230619_1887_Aki_TMTPro18x_K_F7 147.96 112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10744 2167 10153 20561;20562 16481;16482 16482 2 9606 Homo sapiens 0.07141296642907946 GNSLQEILER Unmodified 1157.6041 0.60405094 292 Q00341;A0A024R4E5;B2R5V9;B4DKR8;H7C0A4;Q5HYC5 HDLBP;DKFZp686L08115 Vigilin yes no 0 0 0 4.5 0.5 1 1 52.928 52.973 2 9.6147E-05 15330 20230619_1883_Aki_TMTPro18x_K_F4 157.24 116.8 137640 118710 129270 126590 121750 134800 138560 136270 140210 149520 147280 139280 148630 112490 160750 155430 141710 126950 127250 108740 131880 127390 127510 135770 138830 139470 143100 150030 150840 140990 152100 119210 162170 153940 135670 120930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 526720000 10745 292 10154 20563;20564 16483 16483 1 9606 Homo sapiens 0.03155307666770568 GNSPPSSGEACREEK Unmodified 1603.6896 0.68964784 3575 P41227-2;P41227 NAA10 N-alpha-acetyltransferase 10 yes no 0 0 1 2.5 0.5 1 1 30.812 30.887 3 1.3852E-07 6046 20230619_1881_Aki_TMTPro18x_K_F2 130.02 106.55 24636 13790 35125 31382 46916 58459 33586 44139 34283 32704 45605 54015 44656 42946 48249 21182 53244 44401 22815 12781 34966 30562 47464 56666 34712 45731 35338 34311 46289 53422 45805 43510 49115 23037 50834 41959 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56406000 10746 3575 10155 20565;20566 16484;16485 16484 2 9606 Homo sapiens -0.08804940000527495 GNSQLLLS Unmodified 830.44978 0.44978213 3589 P46087;P46087-4;P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 6 0 1 52.181 52.258 2 0.031078 14897 20230619_1886_Aki_TMTPro18x_K_F6 79.116 59.639 64060 61406 67492 62505 66591 84657 78058 67140 99261 43228 44802 36511 52622 32972 55377 59463 51688 50420 59324 56209 68254 63357 69655 83516 78629 69187 97563 44900 48835 37354 53537 35579 56081 58802 49481 47989 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61773000 10747 3589 10156 20567 16486 16486 1 9606 Homo sapiens 0.02777522972053248 GNSSESIEAIR Unmodified 1161.5626 0.56258006 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YFD1;A0A2R8YD53;A0A2R8YGE5;A0A2R8Y4Q3 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 2.5 0.5 1 1 38.611 38.671 2 4.4675E-06 9196 20230619_1881_Aki_TMTPro18x_K_F2 159.94 133.14 26773 17700 23438 30602 35651 41779 41207 36324 49069 37647 38226 53098 40772 37248 45879 42793 48553 52455 24701 16319 24330 29954 36246 41243 41422 37534 49080 38466 39962 52607 41803 39227 46693 43465 46457 49705 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27358000 10748 2865 10157 20568;20569 16487 16487 1 9606 Homo sapiens -0.011738730925571872 GNTAAYLLYAFTR Unmodified 1459.746 0.74596415 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 63.972 64.002 3 1.7103E-11 19648 20230619_1887_Aki_TMTPro18x_K_F7 189.61 165.36 28928 23394 30002 31229 25570 28962 29478 29521 38773 27489 23302 24362 26127 19298 29704 27012 26227 23991 26755 21482 30327 30864 27033 29467 29783 30074 38334 27814 24779 24699 26731 20494 29934 26862 25112 22827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97775000 10749 3650 10158 20570;20571 16488;16489 16489 2 9606 Homo sapiens 0.03448100689047351 GNTAEGCVHETQEK Unmodified 1558.6682 0.66818411 4412 Q9BQG0;Q9BQG0-2;I3L1L3 MYBBP1A Myb-binding protein 1A yes no 0 0 0 2 0 1 32.286 32.346 3 0.0026802 6630 20230619_1881_Aki_TMTPro18x_K_F2 79.771 66.634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10750 4412 10159 20572 16490 16490 1 9606 Homo sapiens -0.08880325029281266 GNTFVHDPK Unmodified 1013.493 0.49304393 4309 Q92878-2;Q92878;A0A494C1B7;Q32P42;A8K3I2;E7EN38;A0A494C122;E7ESD9;A0A494BZX5;A5D6Y3;E9PM98 RAD50 DNA repair protein RAD50 yes no 0 0 0 6 0 1 37.693 37.768 3 0.0037538 8655 20230619_1886_Aki_TMTPro18x_K_F6 79.201 53.083 77340 53678 77142 73911 77803 79422 69060 81297 96819 80148 89702 95403 90840 62053 82478 109760 105700 89067 71445 49339 78345 73060 80532 79938 71059 82866 96739 81523 92442 95080 92210 67648 85444 108280 100790 84877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174590000 10751 4309 10160 20573 16491 16491 1 9606 Homo sapiens -0.013162872506768508 GNTHTEILK Unmodified 1011.5349 0.53490874 2785 CON__P34955 yes yes 0 0 0 6 0.816 1 1 1 36.35 36.424 3 0.00059892 8172 20230619_1886_Aki_TMTPro18x_K_F6 109.42 24.355 + 70484 69590 103990 84478 234030 235440 149270 157390 210610 102100 148930 173330 104720 110930 148600 75274 150450 172620 65515 63795 104670 86023 230370 224830 157210 164540 208270 108560 153990 170440 110550 114600 150030 81900 144080 162850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 839110000 10752 2785 10161 20574;20575;20576 16492;16493 16493 2 0.02960268437857394 GNTISPIIK Unmodified 941.55458 0.55458155 2042 Q53H22;A8K4H7;Q06203;Q59G63 PPAT Amidophosphoribosyltransferase yes no 0 0 0 2 0 1 48.916 48.981 2 8.5436E-05 13959 20230619_1881_Aki_TMTPro18x_K_F2 157.99 83.578 250000 190480 227260 234870 176390 193090 210910 201450 243530 256140 312970 310550 336370 295430 317070 380600 386590 353960 230890 174810 232000 233060 188260 198670 211820 206850 248990 257590 318870 312540 341760 309620 326930 379420 368990 336590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228930000 10753 2042 10162 20577 16494 16494 1 9606 Homo sapiens 0.0814664444861819 GNTMQQFLQK Unmodified 1193.5863 0.58629239 3887 Q14320;B0S8I6 FAM50A Protein FAM50A yes no 0 0 0 3 0 1 53.541 53.594 2 1.2596E-06 15749 20230619_1882_Aki_TMTPro18x_K_F3 134.25 92.263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10754 3887 10163 20578 16495 16495 1 9606 Homo sapiens -0.002757308597665542 GNTQATSHSFDVR Unmodified 1418.6539 0.65385468 4055 Q5SWX8;A0A024R973;Q5SWX8-3;Q5SWX8-4 ODR4;C1orf27 Protein odr-4 homolog yes no 0 0 0 4.5 0.5 1 1 32.786 32.855 3 6.9409E-06 6701 20230619_1885_Aki_TMTPro18x_K_F5 121.18 95.966 29482 21252 25349 26852 41029 44411 37646 42709 51882 32220 39585 34987 42782 35356 42693 40845 45945 36013 27210 19513 26343 26886 41314 43526 38577 43429 51493 33253 41306 35454 43561 36744 43578 40699 43859 34293 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97856000 10755 4055 10164 20579;20580 16496;16497 16497 2 9606 Homo sapiens -0.038726093952845986 GNVDEELSK Unmodified 989.46655 0.46655441 2890 E7EMN6;P41236;Q6NXS2;E7EUI7 PPP1R2 Protein phosphatase inhibitor 2 yes no 0 0 0 1.5 0.5 1 1 43.118 43.159 2 4.0704E-06 11299 20230619_1881_Aki_TMTPro18x_K_F2 205.83 121.33 61094 29938 63542 65109 63626 85924 74438 82718 99115 70076 95599 112460 105140 87358 84336 52196 129920 134610 56369 27747 64382 63073 66528 85110 75206 84367 99298 72829 98753 111260 106040 89201 88446 57729 123900 126960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50559000 10756 2890 10165 20581;20582 16498 16498 1 9606 Homo sapiens -0.02860020932655516 GNVEADAFRK Unmodified 1105.5516 0.55162144 3985 Q53EY9;Q8NEZ5;B4DFX7;H3BTR7 FBXO22 F-box only protein 22 yes no 0 0 1 6 0 1 40.866 40.958 3 0.00079821 9929 20230619_1886_Aki_TMTPro18x_K_F6 96.24 68.468 96577 84778 91523 93159 116140 119150 111940 118970 137190 118880 133610 127010 145520 112700 105390 171000 171670 133350 89304 77676 93766 93777 118550 118560 113900 121490 138160 120430 137670 128240 146240 119790 111880 168600 163340 127190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104640000 10757 3985 10166 20583 16499 16499 1 9606 Homo sapiens 0.0030676932381084043 GNVFSSPTAAGTPNK Unmodified 1446.7103 0.71030693 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;B4E3I0;A0A6Q8PGI1;Q7Z2Y9;Q5HY93 CALD1;DKFZp686P03208;DKFZp779D0769 Caldesmon yes no 0 0 0 1.67 0.471 1 2 46.496 46.536 2;3 6.4868E-14 12931 20230619_1880_Aki_TMTPro18x_K_F1 134.81 113.97 49641 44461 47452 56887 69160 70077 61154 66150 66284 71905 72757 67720 83015 63594 71471 81022 70801 71798 45912 40794 48763 56583 69859 69782 62294 67972 67560 72223 74757 68838 83791 66681 72896 80600 67755 68289 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 485530000 10758 3798 10167 20584;20585;20586 16500;16501 16500 2 9606 Homo sapiens 0.004820184414484174 GNVGFVFTK Unmodified 967.51272 0.51271674 691 P05388;A8K4Z4;A0A024RBS2;F8VU65;P05388-2;Q53HW2;Q53HK9;F8VWS0;Q6NSF2;F8VPE8;G3V210;F8VW21;F8VRK7;F8VQY6;F8VZS0;F8VS58;F8VWV4 RPLP0 60S acidic ribosomal protein P0 yes no 0 0 0 3 0.816 1 1 1 55.691 55.714 2 0.00049454 16642 20230619_1882_Aki_TMTPro18x_K_F3 147.2 104.12 1556900 1296900 1362500 1512000 1380200 1848900 1524200 1487500 1994800 2035600 1777200 1627100 2173200 1501200 1718100 2043600 1904300 1841400 1438300 1189100 1401800 1513500 1440000 1835200 1542900 1559000 1998300 2016000 1849500 1666300 2181600 1583200 1767100 2032600 1819700 1751300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2321000000 10759 691 10168 20587;20588;20589 16502 16502 1 9606 Homo sapiens 0.027660887600973183 GNVGIGGSAVPPPPIK Unmodified 1458.8195 0.81946344 881 Q96MZ5;A0A087X0Q1;Q7Z739;Q8NA80;A0A024R7W5;B4DPX9;A0A087WY31;Q658Z6;Q8N3V9 YTHDF3;DKFZp451J085;DKFZp451A052 YTH domain-containing family protein 3 yes no 0 0 0 2 0 1 52.517 52.55 3 1.2214E-05 15594 20230619_1881_Aki_TMTPro18x_K_F2 98.943 67.1 79384 67584 72281 85409 80854 97630 95398 88285 114580 74807 75827 79329 90215 67247 81841 88622 88865 73631 73368 62012 74248 84923 83798 97550 95873 90509 113980 76548 80284 79949 91181 70910 83786 87865 84852 70150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108710000 10760 881 10169 20590 16503 16503 1 9606 Homo sapiens 0.1084064913156908 GNVGVVLFNFGK Unmodified 1249.6819 0.68190733 3541 P33316-2;H0YNW5;P33316;H0YKC5;H0YNJ9;H0YMM5;A0A0C4DGL3;H0YKI0;H0YMP1 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes no 0 0 0 5 0.816 1 1 1 62.855 62.889 3 5.9495E-07 19234 20230619_1885_Aki_TMTPro18x_K_F5 147.91 130.18 1738300 1224600 1458600 1585600 1088000 1660600 1449900 1245500 1815100 1679800 1517700 1414900 1656300 1372800 1566400 1807900 1468000 1568300 1603800 1124800 1500600 1572100 1174100 1662900 1452000 1313700 1816600 1667500 1576700 1447400 1681500 1440600 1590400 1795800 1406200 1491700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4283399999.9999995 10761 3541 10170 20591;20592;20593 16504;16505 16505 2 9606 Homo sapiens 0.06705365322773105 GNVVPSPLPTR Unmodified 1135.635 0.63495714 4711 Q9Y2V2;H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9 CARHSP1 Calcium-regulated heat stable protein 1 yes no 0 0 0 2 0 1 45.36 45.441 2 0.00035966 12320 20230619_1881_Aki_TMTPro18x_K_F2 119.68 74.368 73294 50109 59796 75460 68301 82552 77688 77437 86480 79595 99459 122780 98851 97924 128630 81898 123880 129890 67600 46110 62103 74162 70618 82770 78059 79555 88071 81641 101640 121720 102410 100960 129750 85400 118610 122840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38900000 10762 4711 10171 20594 16506 16506 1 9606 Homo sapiens 0.07256505771647426 GNWEQPQNQNQTQHK Unmodified 1835.8299 0.82992156 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;Q5VU77;Q5VU79;Q5VU78;Q5VU81;Q5VU80;Q14157-1;Q14157-4 UBAP2L Ubiquitin-associated protein 2-like no no 0 0 0 5.5 0.5 1 1 35.687 35.762 3 4.4178E-14 7827 20230619_1885_Aki_TMTPro18x_K_F5 179.46 168.61 117160 90552 113380 111740 144570 158660 136120 144610 185810 145450 144430 130910 168130 125220 123230 135820 157540 130110 108270 83097 115950 111730 147560 156550 139250 148630 184780 146620 151020 133400 168630 130010 128050 135980 150220 123740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 612710000 10763 3877;3878 10172 20595;20596 16507;16508 16507 2 9606 Homo sapiens -0.05456019951975577 GNYDEGFGR Unmodified 1013.4203 0.42027292 1187 J3KRR0;J3QQM5;A0A140VJN0;Q9BT23;J3QL69 LIMD2 LIM domain-containing protein 2 yes no 0 0 0 2 0 1 39.276 39.343 2 0.00078423 9486 20230619_1881_Aki_TMTPro18x_K_F2 123.5 119.39 128190 95634 106000 122490 101910 117310 116690 114320 122800 185430 198010 194850 227640 182730 135150 235500 229410 201870 118300 87808 109560 121400 106670 118960 117070 118920 128010 183780 200760 197040 226970 191670 144810 233630 218390 192190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109280000 10764 1187 10173 20597 16509 16509 1 9606 Homo sapiens -0.08590041044078589 GNYMTFK Oxidation (M) 875.38474 0.38473903 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 1 0 1 0 1 43.353 43.353 2 0.054533 11571 20230619_1880_Aki_TMTPro18x_K_F1 76.478 54.931 105970 87313 97941 93826 115910 118660 105060 108070 132370 61938 75554 63143 60176 53639 87431 62159 76204 59267 97931 80001 100380 94596 118680 117910 107390 109890 130800 65241 79488 63816 63237 56077 87660 62256 72902 56385 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34324000 10765 1296 10174 20598 16510 16510 820 1 9606 Homo sapiens -0.057937948254334515 GNYMTFK Unmodified 859.38982 0.38982441 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 2 0 1 49.444 49.503 2 0.02016 14211 20230619_1881_Aki_TMTPro18x_K_F2 94.114 83.884 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10766 1296 10174 20599 16511 16511 1 9606 Homo sapiens -0.045494909628246205 GNYSTDQLCVLDNVK Unmodified 1724.8039 0.80394931 4169 Q7Z4Q2;Q7Z4Q2-2 HEATR3 HEAT repeat-containing protein 3 yes no 0 0 0 6 0 1 56.645 56.717 3 5.9715E-14 16764 20230619_1886_Aki_TMTPro18x_K_F6 142.45 122.07 42068 33403 44196 45103 36892 48022 45132 40366 53814 52605 50471 43764 54952 46754 46034 60708 54907 56741 38908 30679 44623 44615 39181 48141 45298 42111 54207 52266 52083 44972 55529 48875 47540 60513 52462 53928 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197280000 10767 4169 10175 20600 16512 16512 1 9606 Homo sapiens -0.029460502384608844 GPACLVK Unmodified 743.4 0.39999517 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3;Q9BTE3-3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 0 1.5 0.5 1 1 44.551 44.592 2 0.050245 12146 20230619_1880_Aki_TMTPro18x_K_F1 91.26 55.064 82243 57219 71295 79215 77182 92389 70767 72944 104320 82446 84787 74312 77662 66462 69656 77758 90207 64622 75893 52596 73465 78321 79688 91945 72770 76116 103550 82641 87504 75566 79142 69398 72140 77215 85934 61611 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118720000 10768 1140 10176 20601;20602 16513 16513 1 9606 Homo sapiens 0.0180311676239171 GPADMASQCWGAAAAAAAAAAASGGAQQR Unmodified 2644.1871 0.18706564 1061 A0A0S2Q0B1;O14497;O14497-2 ARID1A AT-rich interactive domain-containing protein 1A yes no 0 0 0 3 0 1 62.645 62.675 3 9.4764E-30 19519 20230619_1882_Aki_TMTPro18x_K_F3 189.12 178.22 9581.5 10529 11097 13760 10033 12026 12058 13463 11677 11834 12813 10722 13162 13190 13954 14448 13556 15747 8890.3 9656.5 11149 13605 10559 12321 12037 13611 11963 12013 13099 11036 13472 13587 14157 14570 12989 14935 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45155000 10769 1061 10177 20603 16514 16514 1 9606 Homo sapiens -0.06926041309179709 GPADSLSTAAGAAELSAEGAGK Unmodified 1929.928 0.92796385 4175 Q7Z5L9-2;Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes no 0 0 0 4 0 1 56.946 56.951 3 0.0067751 17148 20230619_1883_Aki_TMTPro18x_K_F4 59.122 47.509 45572 39298 42130 42251 38238 50199 50128 43467 52056 50563 54287 62490 61775 53039 58316 67395 67292 75083 42127 36002 43041 42547 40409 50000 49904 45085 53009 51093 55989 62573 62660 55784 59908 67893 64352 71204 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166620000 10770 4175 10178 20604 16515 16515 1 9606 Homo sapiens 0.0001969906270460342 GPAEESSSWR Unmodified 1104.4836 0.48360145 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 2.5 0.5 1 1 37.523 37.58 2 1.7125E-09 8700 20230619_1881_Aki_TMTPro18x_K_F2 204.36 174.79 56279 48394 57727 54280 66036 80316 65912 63523 83770 80776 78987 71006 88768 55346 67532 64359 91107 73256 52067 44352 58636 54686 68013 78847 67010 66489 84167 80434 81610 71972 89159 58208 70314 65041 86819 69550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69470000 10771 3152 10179 20605;20606 16516 16516 1 9606 Homo sapiens -0.06446100326843407 GPAESPDEGITTTEGEGECEQTPEELEPVEK Unmodified 3343.4409 0.44093568 630 A0A024RAM4;P46821;A2BDK6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 1 0 1 54.546 54.546 4 1.5877E-06 16227 20230619_1880_Aki_TMTPro18x_K_F1 92.198 89.854 53112 35436 54173 48441 36347 38586 30665 47654 49953 61956 61452 59689 62322 54146 52292 57189 51798 67780 49062 32575 54611 47747 39044 39978 31956 48399 50321 61744 62513 60489 63092 56217 53358 58001 49676 64207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1095300000 10772 630 10180 20607 16517 16517 1 9606 Homo sapiens -0.13704714611503732 GPAFVNPLIPESPEEEELFR Unmodified 2269.1267 0.12666366 4713 Q9Y305-3;Q9Y305-2;Q9Y305;Q9Y305-4;H7C5Q2 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial yes no 0 0 0 3 0.816 1 1 1 64.203 64.219 3 3.728E-05 20122 20230619_1883_Aki_TMTPro18x_K_F4 89.049 80.23 4153.9 3967 3676 4328 4657.3 6674.4 6193.9 3097.1 5783.9 5716.1 6296.6 5039.1 6576 3681.6 5544.6 5352.6 6814.9 5689.2 3841.3 3633.5 3796.6 4368.4 4811.6 6487.1 6133.5 3489.8 5934.8 5620.9 6439.6 5102.5 6641.1 3941.4 5724.5 5370.9 6500.4 5404.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60834000 10773 4713 10181 20608;20609;20610 16518 16518 1 9606 Homo sapiens 0.0428653964163459 GPAGDATVASEK Unmodified 1101.5302 0.5302173 3940 Q71UA6;Q59ES3;Q15758;M0QXM4;B4DE27;Q15758-3;Q15758-2 SLC1A5 Amino acid transporter;Neutral amino acid transporter B(0) yes no 0 0 0 3 0 1 39.548 39.602 2 0.0022771 9421 20230619_1882_Aki_TMTPro18x_K_F3 115.78 85.797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10774 3940 10182 20611 16519 16519 1 9606 Homo sapiens -0.016486604955616713 GPAGLGPR Unmodified 723.40277 0.40277236 1676 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 yes no 0 0 0 7.5 0.5 1 1 35.289 35.319 2 0.0082353 7602 20230619_1888_Aki_TMTPro18x_K_F8 105.27 55.229 237050 176580 196720 223120 291310 355500 290720 305110 463500 72743 83133 74618 81362 71381 109960 79349 99435 73639 218760 162100 204860 223160 295790 348060 298070 308840 445910 86856 103090 75818 84672 74140 110550 79404 95062 70098 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78187000 10775 1676 10183 20612;20613 16520 16520 1 9606 Homo sapiens 0.030007082115730555 GPAHCLLLGER Unmodified 1221.6288 0.6288259 3925 V9HWJ5;Q15274 HEL-S-90n;QPRT Nicotinate-nucleotide pyrophosphorylase [carboxylating] yes no 0 0 0 7.5 0.5 1 1 41.718 41.753 3 4.5731E-05 10176 20230619_1888_Aki_TMTPro18x_K_F8 132.55 91.966 142410 97205 126010 148680 129980 138450 149690 150500 195140 164590 172870 183320 168010 151750 171020 193810 181500 204100 131420 89464 129560 145720 135300 141010 151170 153330 195230 166190 178280 184190 171850 159760 174570 194590 173720 193660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 175850000 10776 3925 10184 20614;20615 16521;16522 16522 2 9606 Homo sapiens 0.026876642684783292 GPAPQDQAGPGGAPR Unmodified 1374.664 0.66402543 1071 K7EQQ1;A0A0S2Z3H2;A0A0S2Z3H6;O96005-4;O96005 CLPTM1 Cleft lip and palate transmembrane protein 1 yes no 0 0 0 3.5 0.5 1 1 33.077 33.141 2 3.4896E-07 6784 20230619_1883_Aki_TMTPro18x_K_F4 130.56 111.29 9672.2 6143 8544.7 9945.9 12832 16305 13940 13097 24098 13206 14051 17045 19219 12371 13312 14084 19099 18684 8922.5 5659.8 8853.1 9804.4 13059 15917 14284 13602 23541 13484 15126 16959 19153 13030 13962 14380 18215 17699 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6526400 10777 1071 10185 20616;20617 16523;16524 16524 2 9606 Homo sapiens -0.008320016700054111 GPASTPTYSPAPTQPAPR Unmodified 1794.8901 0.89006221 3160 Q24K25;K7EJY5;Q9NX28;Q6P1N0-2;Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A yes no 0 0 0 8 0 1 40.792 40.785 3 3.1263E-14 9790 20230619_1888_Aki_TMTPro18x_K_F8 164.53 141.11 15808 14156 16366 17463 20179 18693 18630 19420 22875 15537 21979 18631 21282 18181 19109 18475 23800 16659 14630 12983 16638 17382 20592 18835 19008 19686 22996 16019 22537 18781 21644 18779 19722 18467 22677 15868 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52801000 10778 3160 10186 20618 16525 16525 1 9606 Homo sapiens 0.024412776585450047 GPAVGIDLGTTYSCVGVFQHGK Unmodified 2262.1103 0.11030209 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;B3KTV0;E9PNE6;P11142-2;Q53HF2;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PPY6;E9PN25;E9PI65;E9PK54 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein no no 0 0 0 2 0 2 59.007 59.021 3;4 4.4353E-68 18210 20230619_1881_Aki_TMTPro18x_K_F2 312.1 296.16 380260 331500 354050 370440 271770 331270 368200 355780 345870 455830 422310 410580 478490 406190 365100 503190 435050 487480 351560 303790 360730 370570 291570 338590 365170 364530 357200 453720 432000 418800 481170 424320 377910 502800 415940 462980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144430000 10779 3430;2926 10187 20619;20620 16526;16527 16526 2 9606 Homo sapiens 0.029731352038197656 GPCGSFDVR Unmodified 993.43381 0.43381449 3081 H7BXY3;Q7L2E3-3;Q7L2E3;Q7L2E3-2 DHX30 Putative ATP-dependent RNA helicase DHX30 yes no 0 0 0 5 0 1 40.907 40.995 2 0.058604 9934 20230619_1885_Aki_TMTPro18x_K_F5 60.074 43.11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10780 3081 10188 20621 16528 16528 1 9606 Homo sapiens -0.06316506536495581 GPCIIYNEDNGIIK Unmodified 1604.7868 0.78684269 3558 Q59GY2;P36578;B4DMJ6;H3BM89;B4DMJ2;Q53G74;B4DFI6 RPL4 60S ribosomal protein L4 yes no 0 0 0 6 0 2 56.496 56.571 3 8.4967E-09 16659 20230619_1886_Aki_TMTPro18x_K_F6 156.81 137.49 124560 108510 109370 107620 99359 127100 126850 120440 119780 155580 103650 106480 158000 105640 117350 161860 148540 150530 115110 99335 112240 109100 104870 126920 126090 124400 122090 153800 109500 110290 157450 112150 122010 160960 141830 143080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 345240000 10781 3558 10189 20622;20623 16529;16530 16529 2 9606 Homo sapiens 0.008640739463771752 GPCQESFYNLGR Unmodified 1426.6299 0.62994811 4750 Q9Y5Q9 GTF3C3 General transcription factor 3C polypeptide 3 yes yes 0 0 0 7 0 1 48.948 49.034 2 3.3093E-05 13128 20230619_1887_Aki_TMTPro18x_K_F7 136.02 120.76 75137 62453 74683 79311 64132 79814 79538 73448 82691 97687 90535 90818 112450 91645 95407 114860 102270 109660 69481 57312 75785 78712 67924 80508 79420 76150 84477 97212 93484 92558 113230 95759 97804 114700 97833 104190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49993000 10782 4750 10190 20624 16531 16531 1 9606 Homo sapiens -0.06630166153263417 GPCVSENEIGTGGTCQWK Unmodified 1978.8513 0.85131021 2974 F5H365;Q15436;B4E0Q9;B4DF60;Q15436-2 SEC23A Protein transport protein Sec23A yes no 0 0 0 5.5 0.5 1 1 51.06 51.136 3 1.0478E-23 14221 20230619_1885_Aki_TMTPro18x_K_F5 195.98 187.15 99265 91782 112810 103140 97787 118270 116540 121300 122680 140510 132650 137680 160450 118420 129380 146230 149720 152140 91966 84096 113210 103490 103290 118520 116670 124180 125160 140830 136860 139220 161280 124360 133320 146780 143070 144430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 235320000 10783 2974 10191 20625;20626 16532;16533 16532 2 9606 Homo sapiens -0.09896139029774531 GPDALTLLEYTETR Unmodified 1577.7937 0.7937022 4369 Q96JB5-2;Q96JB5;Q96JB5-4;J3QRM1;Q96JB5-3 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes no 0 0 0 4.5 0.5 1 1 62.803 62.829 2 9.7392E-07 19532 20230619_1883_Aki_TMTPro18x_K_F4 169.89 134.24 23366 19034 23037 26777 19474 24556 24857 24798 27031 30806 26851 29664 28513 25469 29141 32443 29567 31721 21603 17488 23402 26367 20678 24993 24825 25484 27434 30767 27658 30010 29087 26775 29665 32441 28300 30129 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48063000 10784 4369 10192 20627;20628 16534 16534 1 9606 Homo sapiens 0.027917100986087462 GPDETLR Unmodified 786.38718 0.38718187 3489 P22234;P22234-2;E9PBS1;D6RF62 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 1.5 0.5 1 1 33.801 33.83 2 0.0057555 7496 20230619_1880_Aki_TMTPro18x_K_F1 138.37 60.619 395420 190930 479740 490620 580560 661410 440510 543430 502440 445050 698000 847050 673840 626910 579940 285270 847190 784840 365350 177530 481830 472390 591340 652430 454860 560580 515780 467250 706770 832980 684490 636100 604350 321200 807570 740380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 632870000 10785 3489 10193 20629;20630 16535;16536 16535 2 9606 Homo sapiens -0.014556230961261463 GPDGLTAFEATDNQAIK Unmodified 1746.8424 0.84244331 3673 P58546;Q69YG1;C9JL85 MTPN;DKFZp761E1322 Myotrophin yes no 0 0 0 3.5 1.12 1 1 1 1 56.886 56.915 3 2.1712E-59 16595 20230619_1885_Aki_TMTPro18x_K_F5 297.97 246.84 241590 196240 219370 232830 233480 256110 263500 263930 289710 296170 280830 291420 335820 272100 293960 345160 318900 344410 223210 179980 225000 232490 242250 257420 264760 269920 293480 297430 291050 295460 338930 285270 301320 345480 305060 327040 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 6782599999.999999 10786 3673 10194 20631;20632;20633;20634 16537;16538;16539;16540 16540 4 9606 Homo sapiens -0.0011042133228329476 GPDNSMGFGAER Oxidation (M) 1252.5142 0.51424965 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;A0A8I5QJA6;E9PLT0;E9PNG3;Q9UG93;Q8WU01;Q9UG12 CSDE1;DKFZp586J0620;DKFZp566C233 Cold shock domain-containing protein E1 yes no 0 1 0 2.5 0.5 1 1 36.03 36.086 2 0.0035686 8073 20230619_1881_Aki_TMTPro18x_K_F2 84.884 73.733 106670 90106 84598 103030 94345 107000 111500 99605 128640 128620 122730 104360 137620 103570 100400 139370 116550 101880 98487 82600 88045 103040 97778 107760 111910 103070 129890 127730 126680 107110 138130 108780 103850 137280 111250 97221 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 170620000 10787 88 10195 20635;20636 16541 16541 42 1 9606 Homo sapiens -0.10190690004105818 GPDWHLK Unmodified 851.42899 0.42898711 3815 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 7 0 1 44.623 44.708 3 0.088963 11206 20230619_1887_Aki_TMTPro18x_K_F7 54.408 26.302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10788 3815 10196 20637 16542 16542 1 9606 Homo sapiens -0.0026702261695845664 GPDWSIPILDFVEQK Unmodified 1742.8879 0.88793694 2666 B5MC35;B5MD16;B5MCA1;Q96G28;Q96G28-2 CFAP36 Cilia- and flagella-associated protein 36 yes no 0 0 0 7.5 0.5 1 1 66.536 66.556 3 0.00023823 20759 20230619_1887_Aki_TMTPro18x_K_F7 92.063 70.833 5829.8 4195.6 4841.5 6560.7 5408.3 5488.6 4503.9 6502.6 5895.5 6980.9 6838.9 6045.4 8559.5 4922 6336.1 6651.1 5975.3 8267.5 5379 3861.7 5017 6413 5550.3 5653.3 4644.5 6581.2 5974 6995.8 7039.4 6143.9 8556.9 5221.3 6464.6 6744.1 5736.5 7827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15094000 10789 2666 10197 20638;20639 16543 16543 1 9606 Homo sapiens 0.0462084892076291 GPEADSEWR Unmodified 1045.4465 0.44648767 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 1.5 0.5 1 1 39.065 39.098 2 5.4607E-07 9661 20230619_1880_Aki_TMTPro18x_K_F1 193.29 182.47 238040 156320 190410 232070 211500 258310 232690 277250 339970 300490 317130 314640 362750 284780 202400 325090 385090 315410 219480 143850 197990 228380 219110 259480 236750 282380 339270 302930 328140 317790 361180 296970 219350 325150 366200 299940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 349660000 10790 3152 10198 20640;20641 16544;16545 16544 2 9606 Homo sapiens -0.07441771872618119 GPEGDGSRDDPGPR Unmodified 1410.6124 0.61238379 926 B4DK86;O94966-2;O94966-7;O94966-6;A0A0A0MR08;O94966-5;A0A8I5KXK1;A5PL36 USP19 Ubiquitin carboxyl-terminal hydrolase yes no 0 0 1 1 0 1 27.989 27.989 3 0.013925 5205 20230619_1880_Aki_TMTPro18x_K_F1 51.546 40.441 7968 5605 8619.4 10077 8524.7 8787.5 8228 7516.1 9181.1 5769.2 9215.4 8549.4 7620.7 6283.7 8424.4 5843.8 9555.3 8974.9 7366.3 5169.2 8707 9782.4 8848.2 8950.3 8345.5 7730.7 9282.8 6014.8 9380.9 8479.1 7865.9 6537.2 8599.8 6063.1 9127.5 8493.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3623100 10791 926 10199 20642 16546 16546 1 9606 Homo sapiens -0.07649790154573566 GPELLTMWFGESEANVR Oxidation (M) 1950.9146 0.9145624 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;Q9NTC4;Q9HAP0 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 1 0 7 0.816 1 1 1 64.664 64.694 3 2.1986E-06 19958 20230619_1887_Aki_TMTPro18x_K_F7 105.14 97.489 30738 30146 38234 30814 23590 24871 32630 32403 31525 29978 39399 38298 38967 35346 44103 42358 40720 59019 28515 27594 37947 31034 25863 25795 32379 32532 32465 30672 40046 38436 40035 36943 44567 43382 39120 55813 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 492480000 10792 3656 10200 20643;20644;20645 16547 16547 2359 1 9606 Homo sapiens -0.022858302502527295 GPELLTMWFGESEANVR Unmodified 1934.9196 0.91964777 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;Q9NTC4;Q9HAP0 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 7 0 1 65.131 65.158 3 0.05806 20185 20230619_1887_Aki_TMTPro18x_K_F7 41.422 29.277 61090 47286 56462 73331 52102 74104 61497 68393 88552 83576 87602 109110 98698 88199 89305 116270 102710 138360 56434 43505 57796 71863 54909 74670 62318 70682 88637 84440 90548 108870 99981 93153 91880 117530 98385 131050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161060000 10793 3656 10200 20646 16548 16548 1 9606 Homo sapiens -0.010415263876211611 GPFADENFK Unmodified 1023.4662 0.46616048 3257 Q6FH57;Q6FH36;O43447;C9JQD4;H0YEL5;A0A7I2YQS4;O43447-2 PPIH Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase H yes no 0 0 0 4.5 0.5 1 1 51.97 52.02 2 0.0021528 14825 20230619_1883_Aki_TMTPro18x_K_F4 109.11 64.663 63091 59540 64493 71398 70334 77765 75445 65070 79860 74691 77710 71597 80957 65380 79036 83283 78366 82171 58405 54584 65531 71203 72720 77875 75892 67653 81022 74905 79948 72652 82403 68615 80391 83330 75013 78044 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139830000 10794 3257 10201 20647;20648 16549 16549 1 9606 Homo sapiens -0.04463395861853314 GPFSEISAFK Unmodified 1081.5444 0.5444108 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4;H7C1C4 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 1 0 1 61.339 61.339 2 0.0016909 18957 20230619_1880_Aki_TMTPro18x_K_F1 122.33 66.762 93024 73717 80416 93422 77292 96281 95959 88561 103670 104330 96551 95881 127220 95210 97913 115800 103910 117470 85904 67660 82789 92743 81147 96939 95894 91461 104950 104360 100720 97716 127380 99404 100510 116080 99461 111500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48674000 10795 1331 10202 20649 16550 16550 1 9606 Homo sapiens 0.006900367233583893 GPFTDVVTTNLK Unmodified 1290.682 0.68196691 2148;3352 A8KA83;Q9P0L0;Q9P0L0-2;Q53XM7;O95292;E5RK64;O95292-2;Q59EZ6 VAPA;VAPB Vesicle-associated membrane protein-associated protein A;Vesicle-associated membrane protein-associated protein B/C no no 0 0 0 3.67 3.09 1 1 1 58.425 58.445 3 2.648E-07 17801 20230619_1880_Aki_TMTPro18x_K_F1 160.18 137.06 119970 108400 111300 124880 103800 135380 136530 138510 166770 114860 111280 110420 115060 99575 126180 145820 128200 134670 110940 99354 113790 124930 109510 136130 136650 140650 165800 117310 116990 112040 117890 105500 128340 145100 122690 128010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1062699999.9999999 10796 2148;3352 10203 20650;20651;20652 16551;16552 16551 2 9606 Homo sapiens 0.048253205321543646 GPGAGPGVGGPSR Unmodified 1064.5363 0.53630573 4756 Q9Y6C2 EMILIN1 EMILIN-1 yes yes 0 0 0 7 0.816 1 1 1 32.738 32.8 2 2.0058E-05 6831 20230619_1886_Aki_TMTPro18x_K_F6 123.42 101.97 38207 23199 38161 37251 45805 56358 47160 44308 76373 56320 83631 113080 73030 68803 81764 48388 91908 93679 35272 21376 38890 36689 47111 55225 48358 46442 76314 58030 85205 110530 75333 71340 83357 51607 87851 88490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57740000 10797 4756 10204 20653;20654;20655 16553;16554;16555 16553 3 9606 Homo sapiens 0.006619025266218159 GPGASGEQPEPGEAAAGGAAEEAR Unmodified 2164.9621 0.96211753 257 A0A024R3P9;Q9H3P7 ACBD3 Golgi resident protein GCP60 yes no 0 0 0 1.5 0.5 1 1 38.5 38.531 3 2.619E-34 9421 20230619_1880_Aki_TMTPro18x_K_F1 195.05 189.63 23454 16739 20228 23743 19980 26707 25565 23942 32643 28415 29388 31072 30676 27819 26615 31188 29124 35074 21645 15390 20843 23429 20978 26699 25661 24776 32709 28573 30368 31306 31088 28979 27301 31492 27882 33251 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 241010000 10798 257 10205 20656;20657 16556 16556 1 9606 Homo sapiens -0.07376504516241766 GPGDGAEEDEAASGGPGGR Unmodified 1684.6925 0.69248461 2246 B2R7I3;Q8N111 CEND1 Cell cycle exit and neuronal differentiation protein 1 yes no 0 0 0 1 0 1 34.33 34.33 3 2.2991E-49 7705 20230619_1880_Aki_TMTPro18x_K_F1 214.82 208.09 9693.9 9023.2 11773 11039 13449 13257 12435 14181 16763 14205 13582 14334 12749 12160 12730 17319 15973 12979 8987.3 8274.1 11805 11016 13798 13262 12735 14415 16703 14361 14054 14476 13053 12874 13149 17066 15231 12384 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52174000 10799 2246 10206 20658 16557 16557 1 9606 Homo sapiens -0.1224739334206788 GPGDTSNFDDYEEEEIR Unmodified 1971.797 0.79700926 456 A8K8B9;A0A024R7J0;A0A8V8TL59;P17612-2;P17612;A0A7I2V5J4;K7ERP6 PRKACA cAMP-dependent protein kinase catalytic subunit alpha yes no 0 0 0 1 0 1 50.424 50.424 2 1.5577E-08 14549 20230619_1880_Aki_TMTPro18x_K_F1 122.45 120.81 8139 5379.7 5950.3 6534.6 3526.5 6282.8 6876.9 6484.9 9074.6 11939 7079.7 12570 18067 14480 5635.6 20063 16117 23012 7500.1 4939.4 6197.2 6502.2 3972.8 6372.4 6805.3 6757.8 9071.1 11793 7860.8 12790 17507 15180 6609.3 20186 15367 21800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16128000 10800 456 10207 20659 16558 16558 1 9606 Homo sapiens -0.15001736375961627 GPGGPLR Unmodified 652.36566 0.36565857 4395 Q96SB3 PPP1R9B Neurabin-2 yes yes 0 0 0 6.5 1.12 1 1 1 1 32.647 32.698 2 0.015978 6381 20230619_1887_Aki_TMTPro18x_K_F7 110.56 21.103 93590 57420 99376 103470 133020 140450 116050 123960 140540 96937 130270 117870 101150 92086 125090 70908 119960 108790 86449 52991 100990 101100 135020 138770 118770 127020 141190 100130 132820 117830 105330 94739 126180 73909 114750 102970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35512000 10801 4395 10208 20660;20661;20662;20663 16559 16559 1 9606 Homo sapiens 0.025570366658030252 GPGGSPGGLQK Unmodified 953.49304 0.49304393 3157 K7EJB8;K7EMN0;Q96A00-2;Q96A00 PPP1R14A Protein phosphatase 1 regulatory subunit 14A yes no 0 0 0 8 0 1 39.57 39.559 2 0.00079053 9308 20230619_1888_Aki_TMTPro18x_K_F8 125.48 74.602 21876 12524 24414 17753 20565 25437 16766 18834 18756 19184 30615 31860 26815 26730 33981 22981 34498 27755 20209 11527 24486 17605 21583 24975 17226 19705 19453 19757 30710 31591 27850 27520 34392 23464 32956 26336 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14341000 10802 3157 10209 20664 16560 16560 1 9606 Homo sapiens 0.014437127493351909 GPGGSQGSQGPSPQGAR Unmodified 1523.7077 0.70768116 4381 Q96MG7 NDNL2 Melanoma-associated antigen G1 yes yes 0 0 0 5.5 0.5 1 1 29.157 29.21 3 8.7039E-14 5514 20230619_1886_Aki_TMTPro18x_K_F6 126.77 122.06 2448.5 1015.5 2252.6 2731.3 3336.1 4696.3 2576.1 2206.1 2168.8 2682.6 3920.2 3993.8 4428.5 4012.9 2749.8 1753.6 4905.4 5476.9 2255.6 946.18 2324.8 2635.9 3366.6 4536.3 2629.9 2440.2 2304.3 2727.8 3960.4 3991.1 4426 4024 2938.6 2010.2 4676.6 5160.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8251700 10803 4381 10210 20665;20666 16561 16561 1 9606 Homo sapiens -0.03322436963526343 GPGNPLDHQITNER Unmodified 1546.7488 0.7488177 3010 Q96PC5;Q96PC5-10;Q59FD2;Q96PC5-12;Q96PC5-7;G3V599;Q96PC5-9;Q96PC5-14;Q96PC5-8;Q96PC5-6;Q96PC5-5;Q96PC5-13;Q96PC5-11;Q86UF2;A4D2H0 MIA2;CTAGE6;CTAGE15 Melanoma inhibitory activity protein 2;cTAGE family member 6;cTAGE family member 15 yes no 0 0 0 4 0 1 38.1 38.143 3 9.0762E-06 8815 20230619_1883_Aki_TMTPro18x_K_F4 119.62 103.72 20927 16425 21614 28320 25793 28368 29169 25699 29462 23354 26947 27003 26661 26057 26690 27687 28731 29027 19351 15132 22007 27592 26541 28604 29210 26398 29874 23856 27761 27225 27247 26980 27258 27872 27472 27554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40704000 10804 3010 10211 20667 16562 16562 1 9606 Homo sapiens -0.002686759240759784 GPGNPVPGPLAPLPDYMSEEK Oxidation (M) 2180.046 0.0459705 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9;A0A994J3N2 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 1 0 5 0 1 58.826 58.88 3 0.0043824 17433 20230619_1885_Aki_TMTPro18x_K_F5 62.648 54.427 16440 11711 19034 16520 18656 19808 19083 18150 19796 20261 21408 20553 22204 16893 20465 20166 20650 19624 15209 10766 19097 16333 19403 19741 19246 18714 20198 20370 21919 20728 22537 17728 20849 20185 19749 18648 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21654000 10805 1863 10212 20668 16563 16563 1193 1 9606 Homo sapiens 0.0031493532701460936 GPGPGGPGGAGVAR Unmodified 1105.5629 0.56285483 254 A0A024R3M7;Q92686 NRGN Neurogranin;NEUG(55-78) yes no 0 0 0 6.5 1.12 1 1 1 1 33.063 33.116 2 2.651E-11 6912 20230619_1886_Aki_TMTPro18x_K_F6 171.99 163.76 102690 65193 68255 107290 90594 120920 120260 134400 201320 185550 148050 147770 237440 148100 82994 223390 205150 160330 94559 60078 72829 104970 93537 121430 121930 137630 198490 183700 158060 151810 231930 156930 94602 219310 194790 153110 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 255180000 10806 254 10213 20669;20670;20671;20672 16564;16565;16566 16565 3 9606 Homo sapiens 0.014295914179456304 GPGPLQER Unmodified 852.44537 0.44536545 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991;H0Y8T4 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 0 4 1.41 1 1 1 1 1 34.757 34.819 2 0.01532 7421 20230619_1883_Aki_TMTPro18x_K_F4 93.195 52.927 401520 294510 344900 386830 454220 478860 430240 424440 551040 444510 505200 470020 502670 417740 416480 427000 555390 483440 370600 270500 356950 384150 462670 476000 438810 437880 552390 449230 520010 474270 509090 433270 432690 432140 529550 458840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1068399999.9999999 10807 1059 10214 20673;20674;20675;20676;20677 16567;16568;16569 16569 3 9606 Homo sapiens 0.013240585491303136 GPGPQLR Unmodified 723.40277 0.40277236 3428 P10645;G5E968;Q86T07 CHGA Chromogranin-A;Vasostatin-1;Vasostatin-2;EA-92;ES-43;Pancreastatin;SS-18;WA-8;WE-14;LF-19;Catestatin;AL-11;GV-19;GR-44;ER-37;GE-25;Serpinin-RRG;Serpinin;p-Glu serpinin precursor yes no 0 0 0 6.5 1.12 1 1 1 1 33.302 33.354 2 0.024225 6650 20230619_1887_Aki_TMTPro18x_K_F7 99.511 37.513 200250 139560 206660 335290 214460 188680 287660 296690 299300 272340 326820 263820 282040 240660 216460 178550 331860 248880 185040 129340 210290 320130 223620 204180 286150 295190 305080 276180 331520 267440 286230 245870 227370 184550 315830 235950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 111710000 10808 3428 10215 20678;20679;20680;20681 16570;16571 16571 2 9606 Homo sapiens 0.030007082115730555 GPGVDVNLK Unmodified 897.49198 0.4919813 3815 Q09666;Q6ZQN2 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 6.5 0.5 1 1 47.645 47.725 3 0.0023479 12543 20230619_1887_Aki_TMTPro18x_K_F7 76.827 39.099 50052 40288 50634 43282 67948 71203 65198 54368 86003 41570 43188 43174 44736 35539 60486 48780 50414 55784 46281 36917 51606 43850 69133 69513 66466 56373 84597 42858 46432 43528 46356 37638 60609 49230 48370 52890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31017000 10809 3815 10216 20682;20683 16572;16573 16573 2 9606 Homo sapiens 0.039134983804160584 GPGVGLLGISK Unmodified 996.59678 0.59678072 805 E9KL42;A0A087WT95;Q86TX2;P49753;B4DV16;A1L172;B3KSA0;P49753-2 ACOT2;ACOT1 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial yes no 0 0 0 3 0 1 57.288 57.32 3 0.033147 17391 20230619_1882_Aki_TMTPro18x_K_F3 44.765 19.548 10161 7952.7 7790.1 10793 11465 11535 10441 10819 13760 10748 8971.4 10350 10483 8432.3 12657 13810 11354 11436 9375.2 7305 8182.6 10669 11593 11592 10683 11101 13640 10860 9512.1 10463 10754 9044.6 12767 13654 10877 10887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26323000 10810 805 10217 20684 16574 16574 1 9606 Homo sapiens 0.09834619856985682 GPHPPGGLLGHGPQEMR Oxidation (M) 1751.8526 0.85257126 4485 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 1 0 7 0 1 35.352 35.423 4 0.00052666 7479 20230619_1887_Aki_TMTPro18x_K_F7 79.347 68.713 25736 21138 26404 22667 33601 34192 30215 32186 44320 17674 19115 19421 21174 17179 21948 21331 23535 20851 23803 19368 26849 22935 34243 33663 31081 32614 43266 18747 20894 19581 21592 18016 22387 21346 22484 19819 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32433000 10811 4485 10218 20685 16575 16575 2788 1 9606 Homo sapiens 0.006719079119648086 GPLATGGIK Unmodified 812.4756 0.47560295 154 A0A024R1R8;Q9Y2S6 hCG_2014768;TMA7 Translation machinery-associated protein 7 yes no 0 0 0 1.5 0.5 1 1 46.247 46.287 2 0.0023847 12677 20230619_1881_Aki_TMTPro18x_K_F2 106.94 51.224 323760 247300 278580 286490 330270 384930 320950 305840 418120 313420 339730 286750 348780 277470 279350 406490 391000 304220 298900 226820 287590 287400 339160 379940 327060 318090 417040 315890 352180 292470 352420 293290 292120 400310 372420 290350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 296710000 10812 154 10219 20686;20687 16576;16577 16577 2 9606 Homo sapiens 0.061864172143259566 GPLIPPLLSLPPPPWGR Unmodified 1806.0556 0.055611391 1302 B3KQA4;Q96QB9;A0A1U9X8D4;A6NDA2;P79522-2;P79522 CAT56;PRR3 Proline-rich protein 3 yes no 0 0 0 8 0 1 66.061 66.08 3 1.2605E-13 20377 20230619_1888_Aki_TMTPro18x_K_F8 125.28 106.45 10085 6724.7 8535.6 8735.2 8389.1 9238.5 9209.6 10409 8982.1 8094.5 10340 8932.8 10230 11018 9423.4 7869.4 9227.3 9757.5 9302.6 6178.3 8798 8665.2 8749.1 9328.8 9238.5 10488 9211.7 8332.1 10531 9106.8 10419 11123 9577 8072.7 8834.2 9245.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36386000 10813 1302 10220 20688 16578 16578 1 9606 Homo sapiens 0.18482580976001373 GPLLEDGALSQAVSAGASSPEFTK Unmodified 2331.1594 0.15942035 3120 I6L9E8;Q8NCA5;A0A8I5KR56;A0A8I5QKV5;A0A8I5KZA5;E9PH82;Q05CT2;A0A8I5KX90;A0A8I5KXK5 FAM98A Protein FAM98A yes no 0 0 0 6.5 0.5 1 1 62.19 62.234 4 0.0038411 18787 20230619_1887_Aki_TMTPro18x_K_F7 66.871 48.507 65284 51512 67145 70202 61412 72544 66850 72250 80569 84781 71991 80965 88807 73077 72385 97526 95576 104150 60367 47317 67986 69384 64439 73150 67546 74151 81040 84886 75054 82085 89339 76968 75315 97894 91282 98821 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 287310000 10814 3120 10221 20689;20690 16579 16579 1 9606 Homo sapiens 0.04708701973777352 GPLLEEQALTK Unmodified 1197.6605 0.66050319 3982 Q52LJ0;Q52LJ0-1 FAM98B Protein FAM98B yes no 0 0 0 4.67 0.471 1 2 54.363 54.379 3 7.7363E-06 15554 20230619_1885_Aki_TMTPro18x_K_F5 132.44 93.644 53549 41398 48878 52531 48990 54747 52628 51090 56319 49776 59997 54991 60780 43910 56233 61155 51637 60680 49463 38001 50062 52162 50990 55106 52981 52430 57283 50540 61386 55262 61725 46604 57040 61134 49513 57606 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182480000 10815 3982 10222 20691;20692;20693 16580;16581;16582 16581 3 9606 Homo sapiens 0.06957935503419321 GPLMMYISK Oxidation (M) 1054.5191 0.51912402 3447 P13639;Q8TA90;Q6PK56;B4DRE8 EEF2 Elongation factor 2 yes no 0 1 0 3.5 0.5 1 1 58.187 58.204 3 0.026275 17595 20230619_1883_Aki_TMTPro18x_K_F4 55.549 35.788 45319 45695 41264 42066 64685 100520 57657 48940 110330 24991 22264 23381 22542 19549 26986 25100 26254 21074 41935 41787 42655 43523 65502 95959 60039 52910 105630 26739 27000 23697 23261 20578 27310 24919 25091 20078 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51473000 10816 3447 10223 20694;20695 16583 16583 2088 1 9606 Homo sapiens -0.005954773950634262 GPLMMYISK Unmodified 1038.5242 0.5242094 3447 P13639;Q8TA90;Q6PK56;B4DRE8 EEF2 Elongation factor 2 yes no 0 0 0 4.5 0.5 1 1 61.385 61.412 3 0.0019029 18522 20230619_1885_Aki_TMTPro18x_K_F5 81.594 55.08 73382 90791 71016 58368 95795 230470 97697 87147 225850 37981 27036 39216 42099 33269 42699 39092 40402 45617 68053 82792 72809 63851 98876 216430 102090 97514 214290 41643 37801 39549 42607 34847 43261 39566 38715 43239 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72869000 10817 3447 10223 20696;20697 16584;16585 16585 2 9606 Homo sapiens 0.006488264675454047 GPLPAAPPVAPER Unmodified 1270.7034 0.70337105 4571 Q9NQC3;Q9NQC3-2;Q9NQC3-5;Q6IPN0;Q53R94 RTN4 Reticulon-4;Reticulon yes no 0 0 0 6 0.816 1 1 1 46.885 46.967 2 3.3328E-07 12115 20230619_1887_Aki_TMTPro18x_K_F7 146.48 126.64 183320 145540 160500 195180 165370 211670 206200 199010 230400 219890 223370 240560 234920 201660 232410 248770 238990 275320 169300 133660 165280 193160 172770 212390 206250 204790 233060 221760 230170 241920 239300 211820 236840 250660 228850 261090 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 975540000 10818 4571 10224 20698;20699;20700 16586;16587;16588 16588 3 9606 Homo sapiens 0.07884750351490766 GPLPLNK Unmodified 737.44357 0.44357454 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B3KVT9;H7C495 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 2 0 1 47.568 47.644 2 0.048639 13362 20230619_1881_Aki_TMTPro18x_K_F2 95.9 47.993 129570 111340 124410 143770 142210 145140 156270 144240 197250 153410 171450 163670 158530 143790 153780 193620 180230 180890 119810 102180 127190 142520 146660 146670 157950 147730 197430 154970 176500 165130 162090 151540 158150 192940 172190 171950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76972000 10819 1984 10225 20701 16589 16589 1 9606 Homo sapiens 0.06435049531182813 GPLQSVQVFGR Unmodified 1186.6459 0.64585618 3200 M0R210;P62249;M0R3H0;Q6IPX4 RPS16 40S ribosomal protein S16 yes no 0 0 0 3.5 0.5 1 1 53.893 53.927 2 5.4737E-06 15696 20230619_1883_Aki_TMTPro18x_K_F4 157.66 119.58 421140 357960 378780 408010 376590 457040 438510 442460 486110 464870 433420 395020 495200 383230 445210 494600 441310 445100 389190 328120 388520 408670 393450 458080 440050 453550 490560 466560 449650 404030 500800 401780 453650 492340 422310 423270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2465500000 10820 3200 10226 20702;20703 16590;16591 16591 2 9606 Homo sapiens 0.059999081459409354 GPNSALVQQLIK Unmodified 1266.7296 0.7295858 336 Q5H9R7-5;Q5H9R7;Q5H9R7-2;Q5H9R7-6;Q5H9R7-4;E9PKF6;H7BXH2;A0A024R5F3;Q5H9R7-3;E9PQP7;B4DYU6;B4DTT7;B4E0C2;H0YEN2;H0YDW1 PPP6R3;SAPS3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 0 0 0 2.5 0.5 1 1 58.071 58.093 3 0.00019261 17629 20230619_1882_Aki_TMTPro18x_K_F3 98.902 53.543 113480 99759 122630 119940 94370 138680 125370 115910 151170 101090 85989 73849 89115 65046 104850 83326 89761 73961 105050 91479 123420 119720 101370 138200 125380 119620 149800 102250 91397 75935 91543 68420 105380 82994 85919 70406 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 119630000 10821 336 10227 20704;20705 16592 16592 1 9606 Homo sapiens 0.10689019522988019 GPNVVGPYGLLQPFADAMK Unmodified 1973.0081 0.0080688509 1 Q14WI3;T1SW94;Q6R0U6;R9YB54;R9Y8K0;R9Y839;R9Y5X1;R9Y5D2;R9Y540;R9Y4G3;R9Y2E6;R9Y292;R4I9W6;U3LDT5;U3LS16;Q4VGD7;V9J3V1;X5BHN0;W8D794;W8D6M0;V9M6T7;V9K3G9;V9JYE8;V9JTR8;V9JTA8;S4SPU5;T1WTX0;V9JD42;T2HL20;I6MRJ2;U3LSH7;I3WRL6;I3Q4L9;I3Q2F2;I3Q1B2;I3PZ06;I3PXI6;H9ST20;H9SR57;H9SQ95;H9SG99;Q4GRH9;Q4GWF8;A0A8A6VJ55;T1Q620;U3LD19;U3LBY6;U3LBX2;U3LB65;U3L5A5;U3L4L8;U3KW55;V9JMR0;V9IVJ9;Q85KV8;V5JS37;Q5S9J1;Q7YCF4;Q5S9G5;Q5S9D9;Q5S948;Q5S8X0;Q5S8V7;Q5S8Q5;Q4ZET1;Q7Y7U2;Q7YCD0;Q7YCD2;Q9B2U3;Q85KW9;Q9B1M4;Q9B1L5;Q94P91;Q8WCX2;Q8HHH3;Q8HHH2;Q8HHH1;Q85L07;Q85L02;Q5XRR9;Q6RR12;V5JTW9;Q6RR39;X2C0V4;Q5SAJ2;Q9B2V7;V5JK95;V5JI67;U5ZBM2;U5Z754;U5Z5R7;U5YUT8;U5YST9;U5KQC8;Q9B2Y9;Q9B2X5;Q9B2X4;Q6R0X2;Q7GSA6;Q7GMM1;Q6WQ94;Q6WQ68;Q6VIF0;Q6VH72;Q6RRM1;Q6RR93;I7CBG2;J3RF54;J7HJU3;L7XZ04;Q4GHR1;M4Q9M0;L7XV77;L7XL00;Q27H87;L7SJJ7;L7NWJ0;L7NW09;L7NVM2;L7NV21;L0E7T1;K9M5U0;K9M374;K9L624;K7WBD5;Q27H48;Q2HJV5;Q4GUE3;Q4G8K0;Q4GPH7;Q4GNU3;Q4GNP1;Q4GL31;Q4GHJ6;J3RF78;J7HNA4;Q0Z7R5;Q0G892;Q0Z7F4;A0A140DH78;A0A140DG25;A0A125RMP7;A0A0X9RPC6;A0A0U2UP39;A0A0E3JV86;A0A0S2PIP8;A0A0R4QLJ5;A0A0R4QFE3;A0A0N7APA1;A0A0N6YQK4;A0A0G2UNI1;A0A0G2UKB3;A0A0G2UI89;A0A0E3T519;A0A8A0WPP1;A1DVT9;A0A8A0WRR1;L7XQU8;Q27H09;Q15IG8;Q4GIA6;Q0Z7G7;Q4GEQ8;A0A140DHB7;Q4GE89;J7EXJ5;Q4GCG5;H9Q052;J7HSS4;H9PTH5;H9PLM0;H9PL90;H9PIG5;H9PI74;H9PGF0;H9PDM5;H9PB80;H9P9N4;H9P913;H9RQU8;H9RVE9;H9SD96;H9SEW8;J7HR25;J7HQ31;J7HPU2;J7HPH0;H9QH30;H9QPE1;H9QT41;Q3S9I4;H9QLB2;Q305D4;Q4F6A5;Q2HK80;Q4F666;Q4F5W2;Q4F2Q7;Q4F1A0;Q4EYR6;Q4EX05;Q305V3;H9R1H9;Q2HKM8;H9QPP5;J9UGR1;J7KBW8;J7HT47;H9QF02;H9RLM5;H9R3Y7;H9R3G8;H9R1Y5;Q85KZ5;Q85KU5;A0A410RF14;F2WG52;G5D7U3;G5D886;D3K5X4;G9LGC6;H9NWU9;H9LT08;H9LMK9;H9LKK7;H9E7X3;H9E7N2;H9E7G7;H9A8H5;H6AGW7;G9LJ51;G9LFQ5;G5D8J0;G9LE20;G9LE07;G9LCS8;G9LCM6;G9LBQ1;G9LB95;G9IFN4;A4ZYI1;F2WGK8;G5D8P2;F2WHP8;A4ZYM0;C9D596;D1MJV5;D2Y6T1;F5CV50;G4W6N9;G4W393;G4W2J6;G4W0U1;G3M8N6;G3M8J7;G3CA46;G3C9Y1;F6N708;F6LHV0;F5CET5;G5D821;F5BAH9;F2WN29;F2WIN6;F2WIH1;F2WID2;F2WHY9;G8JKS0;G5D8K3;Q85KU3;E5DZE0;E7E459;E7CPG6;F1B806;F1B7N2;F1B744;F1B6U0;F1B5T9;F1AZI8;F1AKN3;E9NZQ9;E9LCH3;E7CNR9;A0A023I7N5;E7CNH8;E7CNA0;E5FWK8;E5FW52;E5E1W1;E5E1U8;E5E1S2;E5E138;E5E0Y6;E5E0I0;E5E024;E5DYN0;F2WEK6;D3YP12;F2WE76;D9MPI7;F1KLV7;F1B819;E5DYH8;E5DYD9;E5DY61;E5DY09;E2FQK2;E2FPU2;E2CZ36;D9MZQ8;D8L4V9;D3K626;D8L335;D7PB39;D7P9J3;D6R7Z5;D6R6F2;D6R5V7;D6BYK6;D5MAA4;D5I7R3;F2WFI1;A6YUP6;A8QJM2;A8WDQ6;A8DBG1;A7XSP6;A7LP59;A6ZHX0;A6ZHR8;B2Y8W7;B2YB73;B3VSQ8;B5M8F3;C9D531;C8YI07;C8YGM6;C8YBG9;C8Y2D4;C8XZ66;C8XZ40;C8XVJ2;C7DRQ5;C7B2N5;C7AB04;C7AAW5;C5MN97;C5MN58;Q85KT8;B0Z6P6;A6YXE1;B1NUN0;A6YVW1;Q85BK7;Q7YEG1;Q7YEF7;Q7YED6;Q7YCG9;H9P675;H9P4Y3;H9P4L6;B2D481;B2XQK2;B2XN53;B2XMJ6;B2XLD1;B2XL01;B2XK13;B2XIR0;B2XGX5;B2KMN7;B2KLP9;B1PZ98;A6ZHE3;B1NVL8;C5MM18;C4PK89;C3W5L0;B8X582;A0A8B6QQU3;A6ZC19;A0A8B6QQC4;A0A8A6VJH3;A4ZM51;A4ZMC7;A4ZMF3;A4ZML8;A6ZGG2;A6ZG45;A6ZF31;A6ZEK0;A6Z9A8;A6YWL9;A6Z7M3;A6Z6J7;A6Z693;A6Z5I3;A6Z2S4;A6YZM0;A6YZB6;A6YYY6;A6YXP5;A0A8F5ZEU7;A0S2L2;A0S3S8;A4ZLF6;B8RBW5;A4ZKS2;B7TD27;B6V2F8;A6ZHP3;A6ZGS6;H9P3U3;X5BIK3;A4ZM25;A4ZLU9;A4ZLE3;A0S8J7;A4GWV7;A0S2N8;A3FP01;A1Z4Y8;A1Z4F6;A1E1U4;A1DVR3;A6ZGJ8;A1DV55;A0SBM6;A0A141ZQV7;A0A141ZRZ7;A0A343GFF2;A0A343GG75;A0A343GF87;A0A7T8JKI7;A0A343GAR4;A0A343G753;A0A7D5TN57;A0A7D5TH07;A0A343JVE0;A0A343IC59;A0A343SU79;A0A343JSD7;A0A343JM85;A0A343JJ97;A0A343J427;A0A343J414;A0A343IKS5;A0A343IDB2;A0A343IC33;A0A343GRF0;A0A7D5T6F6;A0A343I6I3;A0A343HGL5;A0A343H1Z3;A0A343GUB4;A0A4D6CRJ4;A0A343GHC8;A0A343GRI9;A0A343GLP9;A0A7D5TGL5;A0A6G7GD61;A0A6G9L5X2;A0A343SHL5;A0A343SG58;A0A343S077;A0A343RZP5;A0A343JY78;A0A343RR61;A0A343RVK1;A0A343JUA0;A0A343JWI0;A0A7T8G621;A0A7D5U3A6;A0A7G5XR52;A0A7G5XR91;A0A7T0M5B5;A0A7T4WP22;A0A7T4WQU4;A0A7T5BNB5;A0A343GR98;A0A343GQC3;A0A7D5TKM6;A0A343GTU5;A0A6B9R9P2;A0A0X8DA35;A0A410RF35;A0A3G5C3Z8;A0A3S8V7S1;A0A3S8V768;A0A3S5HPG2;A0A3Q9VJ69;A0A3Q9CRS1;A0A3Q8QV40;A0A3G5BY72;A0A3Q8QQP6;A0A3G5CC12;A0A3G5CBK2;A0A3G5C023;A0A344AJR9;A0A3G5C006;A0A3G5BZX3;A0A3G5BYC2;A0A4D6CQZ3;A0A4D6FFU3;A0A343SV02;A0A344AJ61;A0A344AK23;A0A344AJZ7;A0A649YFD1;A0A3S8V812;A0A343UD38;A0A6B7GEQ3;A0A3G5AU89;A0A3S9JHN4;A0A3Q8R026;A0A343SUV0;A0A346LZU8;A0A346M0I2;A0A411L9W7;A0A346M0E3;A0A493QZE1;A0A346M078;A0A346M065;A0A346M000;A0A346LZX4;A0A346LZT5;A0A3G5ATT1;A0A346LZS2;A0A346LZQ9;A0A346LZP6;A0A493QZK6;A0A345ALL7;A0A4D6CNQ8;A0A4D6CQT4;A0A345ALH8;A0A3G3C8U8;A0A343RA64;A0A343SIC5;A0A343SJD9;H9MQG2;A0A8A0WQ53;A0A6B9R902;A0A8A0WRS8;A0A068C9Z7;A0A097PX64;A0A097PX89;A0A097PVF1;A0A097PVP0;A0A097PWD6;A0A097PW36;A0A097PVV2;A0A097PZK0;A0A097PZK9;A0A097PZ19;H9P359;L7P4B9;L7P4B8;G9LHL8;G9LB43;H9MJU9;H9MJW2;H9MPV4;H9MQ45;H9MQ71;A0A343GR07;A0A6B9RCW4;A0A343SQH1;A0A343HGW9;A0A0N6W1Y9;A0A075XDP0;A0A075X7J5;A0A098CK12;A0A098CLD5;A0A346M0I0;A0A346M050;A0A0N6YNN2;A0A075X7D1;Q8W9B1;A0A075X7E4;A0A075X6R1;A0A075XDG3;A0A346M0E2;A6ZHG8;A0A6B9RA19;A0A8A0WL68;A0A343R0I1;A0A6G9L870;A0A3S9JHP1;A0A8A9WR00;A0A6B9RDS0;Q4R1L7;H9MRG3;A0A344AJ87;A0A7D5PN66;A0A343SQJ7;H9MS34;A0A343LMS1;A0A343LLE0;A0A343LL88;A0A343KKH4;A0A343KLU2;A0A7D5PJZ7;A0A343L5E3;A0A343KV55;A0A343LJL6;A0A7D4W529;A0A343KWA8;A0A343LMU7;A0A343LEZ6;A0A343LI07;A0A3T0U9Y6;A0A6H0MXM6;A0A343SIR8;A0A6B9RB71;A0A6B9RBU6;A0A343SU53;A0A343SQL0;H9MRT0;A0A343KKG1;A0A343L3I0;J7HR73;J7HWH1;H9MSR8;H9MWB6;H9MYH0;F6N878;A0A343KMH6;A0A343KMI9;H9S4I5;J7HKC6;J7HLK4;Q4F4Q9;A0A098CMN4;A0A343KKE4;Q8WCX9;A0A8D4W0R9;S5RP67;V9N787;A0A023R1S1;A0A8D4W4U1;A0A346M025;A0A098CK27;A0A098CLF3;A0A344AJA0;A0A141ZSX2;U3LDZ9;A0A059RWN8;A0A059S0J3;A0A143FYT3;A0A1L7NZE6;A0A1L7NZD2;A0A1L7NZB1;A0A1L1ZI05;A0A1L1ZEQ7;A0A1J0QK96;A0A1J0Q567;A0A1J0PZI6;A0A1J0PVD8;A0A1J0PQP2;A0A1B1PEQ1;A0A1B1PEP1;A0A1B1PEM7;A0A1B1IIN8;A0A1B0WA42;A0A1B0W6A1;A0A1B0W2W2;A0A1B0W1D4;A0A1B0W0B7;A0A1B0VZL6;A0A165KMW0;A0A023Q5S8;A0A059QD90;A0A023Q875;A0A059QDA5;A0A344AJ74;A0A023R5N9;A0A059QB76;A0A059QCS4;A0A059QJ42;A0A059QPU5;A0A059QP35;A0A059QN62;A0A059QM28;A0A059QL72;A0A059QKS9;A0A059QJL5;A0A059QJF0;A0A059QJ58;A0A059QIL1;A0A059QCY2;A0A059QIA1;A0A059QHY5;A0A059QHN0;A0A059QHI3;A0A059QHG0;A0A059QFE2;A0A059QF23;A0A1S6LYZ9;A0A1S6M5H7;A0A1S6MN81;A0A342LFW2;A0A0C5B383;A0A096WL34;A0A0A1EKI0;A0A0A0PJK5;A0A097QG33;A0A097QC34;A0A097QBR8;A0A097Q823;A0A097Q7J7;A0A096ZZZ8;A0A096WT46;A0A096WM16;A0A096WG04;A0A141ZSZ8;A0A096WDG5;A0A096WB51;A0A096W2C4;A0A096VZ96;A0A075X6X5;A0A068BZL9;A0A0D4WPI6;A0A0E3DIX1;A0A0E3GKZ2;A0A0C5B7B0;A0A0C5BA16;A0A059S6Z7;A0A1W6ELZ8;A0A343F404;A0A1U9IIV6;A0A343EQJ5;A0A343E9E8;A0A343E970;A0A343DVD9;A0A343DSY1;A0A342YGK3;A0A342YF33;A0A342LFY8;A0A1S6MXN3;A0A143FYN8;A0A1U9IFI5;A0A143FYI7;A0A1S6P745;A0A1S6P6U9;A0A1S6NZ18;A0A1S6NUA1;A0A1S6NTK4;A0A1S6NM71;A0A1S6NJA4;A0A143G091;A0A023Q7R1;A0A4D6FQ47;A0A023QC18;A0A059QV06;A0A5J6EDA3;A0A5J6M8T3;A0A5J6SUX3;A0A5P8DQ20;A0A5P9RKK5;A0A343G6P7;X5BKU3;A0A343FRN1;A0A059RJI0;A0A059RIX0;A0A059RIN0;A0A059RIF4;A0A059RHU5;A0A059RHS4;A0A059RHK8;A0A059RH65;A0A059RF58;A0A059RDN0;A0A059R906;A0A059R4W0;A0A059R0Q7;A0A059R071;A0A059QWC0;A0A5B9R5Q2;A0A344AK75;A0A023QG73;A0A5P9RQ33;A0A344AJ35;A0A649YFC6;A0A6B7PV67;A0A6B9R992;A0A343YSP7;A0A343YS78;A0A343WNZ8;A0A343VGQ5;A0A343V826;A0A3S9JI76;A0A344AK36;A0A5P9RTK1;A0A4D6FLX2;A0A344AK88;A0A4D6FP44;A0A345AL48;A0A345AK73;A0A345AJW9;A0A345AJB1;A0A345AJ72;A0A344AUF7;A0A344AKE0;A0A343G2Q6;A0A059QV99;A0A059QUY0;A0A059RXD5;A0A059QSN6;A0A059RKR5;A0A059RKH3;A0A059RKC9;A0A059QR22;A0A059QQZ5;A0A059QQB4;A0A059QQ34;A0A023R4Q0;A0A023R388;A0A023R2I7;A0A023R170;A0A023QYN1;A0A023QXJ5;A0A023QWQ3;A0A023QW57;A0A023QUI7;A0A023QST8;A0A023QRY9;A0A023QR60;A0A023QMR7;A0A023QL98;A0A023QKQ2;A0A023QKB4;A0A059RM85;B4YG02;A0A059RN67;A0A059RU00;A0A059QRV9;A0A059QRC9;A0A059QR65;A0A059RIX1;A0A059RJY0;A0A343F7R9;A0A059RK86;A0A059RUM7;A0A059RU99;A0A059RU04;A0A059RSK8;A0A059RNB9;A0A059RS79;A0A059RS19;A0A059RRR8;A0A059RR83;A0A059RR41;A0A059RQH8;A0A059RPU0;A0A059RP14;A0A059RNR7;A0A059RNK2;P03886 ND1;ndh1;NADH1;NDI;MT-ND1 NADH-ubiquinone oxidoreductase chain 1 yes no 0 0 0 3 0 1 64.991 65.022 3 0.0026211 20546 20230619_1882_Aki_TMTPro18x_K_F3 69.188 53.304 27424 26743 31000 31719 22625 31523 28494 28392 35150 34507 33101 31431 35680 30621 32399 38107 38197 36966 25416 24512 31078 31626 24372 31809 28611 29392 35356 34462 34159 32031 36186 32011 33354 38093 36482 35128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26886000 10822 1 10228 20706 16593 16593 1 9606 Homo sapiens 0.06048513922883103 GPPAPAPEVEELAR Unmodified 1431.7358 0.73579339 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 2.5 0.5 1 1 49.586 49.654 2 4.0245E-11 14245 20230619_1881_Aki_TMTPro18x_K_F2 180.81 158.1 217160 174340 184360 178650 189660 239970 277110 263320 340370 333500 271300 259360 373880 285870 273440 385590 282560 295880 200530 159690 190170 181040 199310 238530 276090 269100 340600 331120 285930 267710 373350 299370 280950 380540 270350 281930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 421820000 10823 2830 10229 20707;20708 16594;16595 16594 2 9606 Homo sapiens 0.03719492963841731 GPPCGPVNCNEK Unmodified 1327.5649 0.56490502 1053 A0A384NQ35;A0A0K0K1L8;Q06323-3;Q06323;Q06323-2;Q6FHU3;Q86SZ9;H0YLU2 PSME1 Proteasome activator complex subunit 1 yes no 0 0 0 5.5 0.5 1 1 39.372 39.461 3 8.2625E-05 9307 20230619_1886_Aki_TMTPro18x_K_F6 113.42 91.861 83097 61961 91518 98084 83937 94653 87133 92221 110570 107190 134870 130590 148500 112270 102750 122380 157690 143600 76859 57030 92185 95993 87901 95874 88465 94805 112260 108240 137730 130910 148890 117030 108410 123950 150240 136220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 286330000 10824 1053 10230 20709;20710 16596 16596 1 9606 Homo sapiens -0.08577483950784881 GPPDFSSDEEREPTPVLGSGAAAAGR Unmodified 2569.2045 0.20447307 3578;668;675 A0A024RBE7;P42167;G5E972;P42167-3;A0A024RBH7;P42167-2;Q59G12;P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 0 0 1 3 0.816 1 1 1 48.461 48.522 3 2.9239E-85 13754 20230619_1881_Aki_TMTPro18x_K_F2 313.77 301.71 505010 451750 511570 535000 496400 537070 528140 566290 627770 571550 574060 563050 584610 515870 553700 626300 606400 681380 467290 414170 519000 533640 517670 543710 533970 576570 631720 577140 591920 570560 595050 539590 566930 630450 580210 646320 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1239100000 10825 668;675;3578 10231 20711;20712;20713 16597;16598;16599;16600 16597 4 9606 Homo sapiens -0.017360992309932044 GPPGPPGGLR Unmodified 903.49265 0.49265 120 A0A024R104;Q12860-2;Q12860 CNTN1 Contactin-1 yes no 0 0 0 8 0 1 38.516 38.502 2 0.0018576 8870 20230619_1888_Aki_TMTPro18x_K_F8 100.74 75.819 98363 95463 103620 82100 47232 41352 48465 51194 56975 92694 135190 125140 99575 99141 114050 111740 138430 126360 91099 87267 103780 83645 53480 45294 49278 52816 60695 92353 133400 124720 103530 103720 117050 112920 132130 119910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63732000 10826 120 10232 20714 16601 16601 1 9606 Homo sapiens 0.0370433782014743 GPPNHHMGPMSER Oxidation (M) 1461.6242 0.62415123 4485 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 1 0 5.5 0.5 1 1 25.274 25.327 4 0.064845 4273 20230619_1886_Aki_TMTPro18x_K_F6 47.915 33.885 1360.4 1227.1 1168.9 1763.7 1507.3 1569.9 0 0 707.54 1825.2 1327.5 1609 612.75 872.09 979.42 1224.9 1654.9 1826.8 1257.2 1127.3 1210.1 1731.1 1500.7 1567.2 0 0 712.18 1739.8 1303.2 1613.9 668.65 942.24 1028.3 1257.7 1578.1 1728.1 1 1 1 1 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1289700 10827 4485 10233 20715;20716 16602 16602 2789 1 9606 Homo sapiens -0.08819587936591233 GPPPAPRPTSR Unmodified 1131.6149 0.6148904 1885 A0A994J7P9;P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 yes no 0 0 1 1.5 0.5 1 1 28.709 28.746 3 0.0033783 5223 20230619_1881_Aki_TMTPro18x_K_F2 76.332 36.063 13315 14443 14018 14398 17646 18046 15751 20461 18907 19726 18201 14844 15674 16560 18541 14809 27028 17247 12343 13213 14237 14605 17982 18037 16102 20691 19067 19822 18580 15352 16248 16929 19245 15061 25710 16391 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11655000 10828 1885 10234 20717;20718 16603 16603 1 9606 Homo sapiens 0.054347548316854954 GPPPHELR Unmodified 901.477 0.47699993 2592 B4DUD5;P33240-2;P33240;E9PID8;E7EWR4;B3V096 CSTF2 Cleavage stimulation factor subunit 2 yes no 0 0 0 3.5 0.5 1 1 28.212 28.304 3 0.0099626 4900 20230619_1883_Aki_TMTPro18x_K_F4 79.474 29.661 11118 9181.1 12397 9123.7 13726 12338 10771 14232 14967 11321 13088 12748 14492 12486 14956 9399 15846 11448 10291 8406.7 12480 9277.5 14055 12286 11175 14314 14928 11645 13578 12865 14770 12727 15215 9631.4 15122 10868 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31793000 10829 2592 10235 20719;20720 16604 16604 1 9606 Homo sapiens 0.02232051303087701 GPPPPPGDENR Unmodified 1131.5309 0.530886 3850 Q13435;E9PPJ0;E9PJ04;H0YCG1;E9PJT3 SF3B2 Splicing factor 3B subunit 2 yes no 0 0 0 1.5 0.5 1 1 32.594 32.624 2 1.8931E-12 6707 20230619_1881_Aki_TMTPro18x_K_F2 213.98 198.09 30812 15134 34508 36419 42670 67618 44632 48433 52370 35734 52830 63250 52401 45309 45877 25538 53592 52565 28448 14052 34914 35375 43890 65454 45130 50444 52849 37664 54228 62276 53187 46299 47073 27571 51195 49644 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 50266000 10830 3850 10236 20721;20722 16605;16606 16606 2 9606 Homo sapiens -0.029618210558510327 GPPPPPGDENREMDDPSVGPK Unmodified 2186.9902 0.99024653 3850 Q13435;E9PPJ0;E9PJ04;H0YCG1;E9PJT3 SF3B2 Splicing factor 3B subunit 2 yes no 0 0 1 3 0 1 43.183 43.249 3 0.0015548 11020 20230619_1882_Aki_TMTPro18x_K_F3 62.658 57.449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10831 3850 10237 20723 16607 16607 1 9606 Homo sapiens -0.05576897860601093 GPPPPPR Unmodified 716.39696 0.3969587 3564;1699;1832 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;A0A7P0T8N8;O14776-2;O14776;G3V220;B7Z921;B4DDV7;A0A8V8TMY5;Q75N03-2;Q75N03 RBMX;TCERG1;CBLL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;Transcription elongation regulator 1;E3 ubiquitin-protein ligase Hakai no no 0 0 0 6 0.816 1 1 1 30.314 30.384 2 0.038846 5829 20230619_1885_Aki_TMTPro18x_K_F5 91.26 26.394 15853 10739 17784 20502 24934 27605 20148 22607 22312 15759 24103 29294 24876 23133 24431 15274 27396 26659 14658 9914.2 18028 19970 25202 27240 20669 23258 22654 16716 24718 28890 25355 23647 24960 16147 26178 25203 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21109000 10832 3564;1699;1832 10238 20724;20725;20726 16608 16608 1 9606 Homo sapiens 0.027416096998990724 GPPPPPTASEPTR Unmodified 1302.6568 0.65681479 1699 A0A7P0T8N8;O14776-2;O14776 TCERG1 Transcription elongation regulator 1 yes no 0 0 0 4 0 1 36.155 36.201 2 2.4583E-06 7981 20230619_1883_Aki_TMTPro18x_K_F4 143.28 98.747 24702 16656 18393 22818 22773 25499 23996 23577 34066 29041 30564 29689 34185 31205 30658 31797 30053 35252 22768 15311 19302 22561 23379 25532 24424 24366 33984 29100 31673 30165 34619 32168 31212 32138 28796 33427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54270000 10833 1699 10239 20727 16609 16609 1 9606 Homo sapiens 0.017592657295381287 GPPPPPTASEPTRR Unmodified 1458.7579 0.75792582 1699 A0A7P0T8N8;O14776-2;O14776 TCERG1 Transcription elongation regulator 1 yes no 0 0 1 7 0.816 1 1 1 31.919 31.962 3 1.2526E-13 6154 20230619_1887_Aki_TMTPro18x_K_F7 190.35 139.34 68598 54508 66056 71672 86387 84212 73514 77891 100440 71904 88436 87110 85060 65727 81708 86503 102790 87269 63400 50048 67633 71120 87744 84077 75704 79844 100220 73501 91136 87059 86747 69621 84327 86624 98038 82937 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 275100000 10834 1699 10240 20728;20729;20730 16610;16611 16611 2 9606 Homo sapiens 0.0468971743223392 GPPPSWGR Unmodified 852.42424 0.42423608 2236 B2R6F3;P84103-2;P84103 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 yes no 0 0 0 3.67 3.09 1 1 1 39.35 39.368 2 0.011968 9733 20230619_1880_Aki_TMTPro18x_K_F1 96.19 61.383 307280 243540 318770 298300 355640 426680 368870 368420 464060 361610 396110 402750 425840 343420 367760 361450 426390 366140 284160 223460 323350 298470 367220 420260 374060 380120 464370 367330 410900 404920 430840 357220 378140 363300 406990 347930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 508060000 10835 2236 10241 20731;20732;20733 16612;16613 16612 2 9606 Homo sapiens -0.007879067597173162 GPPPSYGGSSR Unmodified 1060.4938 0.49377221 3564;3963 P38159;P38159-2;B4E352;B3KRG5;H3BUY5;Q96E39;Q2VIN3 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 0 0 6 1.41 1 1 1 1 1 32.148 32.202 2 1.4561E-08 6530 20230619_1886_Aki_TMTPro18x_K_F6 178.55 157.04 68568 35585 79707 79054 123760 132430 86175 95425 81412 70866 104940 110230 105510 88945 102850 51007 114810 102190 63344 32982 80685 76848 123970 128920 88986 99347 84129 74156 106640 109320 107520 90502 104980 54919 109650 96561 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 285590000 10836 3564;3963 10242 20734;20735;20736;20737;20738 16614;16615;16616;16617 16616 4 9606 Homo sapiens -0.03405492601609694 GPPPTDPYGRPPPYDR Unmodified 1780.8533 0.85328277 3000 F8WJN3;Q16630-3;Q16630;Q16630-2;B4DSU9 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes no 0 0 1 6 0.816 1 1 1 40.416 40.499 3 1.1954E-05 9451 20230619_1887_Aki_TMTPro18x_K_F7 93.237 89.135 143950 108450 182260 177300 227350 207590 214860 197130 186550 191130 209020 183330 185610 150780 228460 153540 181520 148050 133330 99855 182570 173720 231680 207390 216510 201980 192610 193200 212330 185370 192080 156790 228540 154230 173900 140800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 254110000 10837 3000 10243 20739;20740;20741 16618;16619;16620 16620 3 9606 Homo sapiens -0.005909741673349345 GPPQEEEEEEDEEEEATK Unmodified 2102.8288 0.8287629 2314 B2RDE8;A0A384NPW1;P51858;A8K8G0;B7Z958;B7Z525;P51858-2;P51858-3 HDGF Hepatoma-derived growth factor yes no 0 0 0 1 0 1 43.469 43.469 3 2.7294E-24 11572 20230619_1880_Aki_TMTPro18x_K_F1 212.72 209.63 20962 12112 18718 23631 16874 32846 23322 21364 37299 28621 30041 56670 51802 53254 22204 73177 68899 106770 19331 11195 19224 22998 17992 32192 23556 22836 36906 29434 32255 56128 50903 56095 25971 74904 65733 100920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87654000 10838 2314 10244 20742 16621 16621 1 9606 Homo sapiens -0.17853833203298564 GPPQEEEEEEDEEEEATKEDAEAPGIR Unmodified 3041.2745 0.27452228 2314 B2RDE8;A0A384NPW1;P51858;A8K8G0;B7Z958;B7Z525;P51858-2;P51858-3 HDGF Hepatoma-derived growth factor yes no 0 0 1 1 0 1 48.043 48.043 4 1.5351E-60 13513 20230619_1880_Aki_TMTPro18x_K_F1 243.35 236.99 76931 47097 72774 91295 73320 111370 81546 80005 106790 98695 99524 125810 112850 101440 95886 113010 102460 120930 70993 43513 74430 88690 76632 110210 82522 84434 107080 99615 103200 125560 113980 106020 98266 113780 98093 114710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 758780000 10839 2314 10245 20743 16622 16622 1 9606 Homo sapiens -0.16446399724918592 GPPQEEEEEEDEEEEATKEDAEAPGIRDHESL Unmodified 3622.5191 0.51906266 2314 B2RDE8;A0A384NPW1;P51858;A8K8G0;B7Z958;P51858-2;P51858-3 HDGF Hepatoma-derived growth factor yes no 0 0 2 1 0 1 48.623 48.623 4 2.8097E-52 13820 20230619_1880_Aki_TMTPro18x_K_F1 232.73 230.78 17203 14203 22845 28154 21868 26287 31294 26447 15928 21697 20086 27501 22124 12096 22164 26131 25249 35476 15951 13110 22767 27229 22999 26696 30528 26909 17289 22320 20570 27117 22475 13770 22733 26532 24199 33559 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117690000 10840 2314 10246 20744 16623 16623 1 9606 Homo sapiens -0.18729610492482607 GPPQSPVFEGVYNNSR Unmodified 1746.8325 0.83254733 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;Q8WWM7-7;H3BSK9 ATXN2L Ataxin-2-like protein yes no 0 0 0 7.5 0.5 1 1 50.518 50.597 3 8.2625E-07 13778 20230619_1888_Aki_TMTPro18x_K_F8 119.92 102.85 230190 228870 284660 242000 283320 331740 315740 249840 287090 230450 243790 208890 227620 166700 303260 220750 221660 198860 213550 209540 284410 244630 295110 326820 315490 260530 292200 233440 251450 211750 236160 176320 302080 220020 212720 189190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 265910000 10841 4285 10247 20745;20746 16624;16625 16625 2 9606 Homo sapiens -0.010995645469847659 GPPTAGSTAQSPGAGAASPAGR Unmodified 1864.9028 0.90275216 3380 P04198 MYCN N-myc proto-oncogene protein yes yes 0 0 0 7 0 1 35.97 36.037 3 1.8197E-37 7668 20230619_1887_Aki_TMTPro18x_K_F7 157.14 137.86 2366.8 772.8 1389.7 3450.5 2639.5 3048.4 4601.9 2567.8 5322.2 3562.7 3464.3 3323.2 5165.2 4071.5 3913.6 4720.4 4637.2 4930.5 2172.8 731.68 1527.1 3249 2698.5 3096.3 4536.3 2690.7 5301.5 3547.3 3715 3412.6 5157.5 4212.1 4045.8 4742.4 4431.8 4679.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67953000 10842 3380 10248 20747 16626 16626 1 9606 Homo sapiens 0.004896890508234719 GPQAAVASQNYTPK Unmodified 1430.7154 0.7153923 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;H0Y9Y3;Q9UMS6;Q9UMS6-3;B4DLE4;Q9UMS6-5 SYNPO2 Synaptopodin-2 yes no 0 0 0 8 0 1 43.266 43.276 3 0.0054446 10814 20230619_1888_Aki_TMTPro18x_K_F8 69.456 53.565 20697 15501 23510 26039 31709 34304 32436 34746 37725 29286 34452 33162 36767 27960 31939 32235 41573 35138 19149 14278 23792 25522 32296 34051 32821 35304 37975 30018 35592 33328 37210 29257 33091 32488 39639 33367 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6862500 10843 4686 10249 20748 16627 16627 1 9606 Homo sapiens 0.017263223040117737 GPQAGLGPR Unmodified 851.46135 0.46134987 2901 E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;C9J2Z7;C9K073 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 yes no 0 0 0 8 0 1 34.181 34.177 2 0.0018635 7176 20230619_1888_Aki_TMTPro18x_K_F8 111.82 14.748 54251 32814 50127 51916 62502 66000 52362 52867 83242 29051 31686 22253 22930 19565 33072 28606 43617 18691 50051 30231 51449 51009 63721 65344 54302 54281 80821 30556 34497 22871 24210 20738 33998 28065 41458 17949 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30822000 10844 2901 10250 20749 16628 16628 1 9606 Homo sapiens 0.029677647860467005 GPQGVEDGDRPQPSSK Unmodified 1652.7754 0.77542638 2238 B2R6J3;Q96EY8;F5H4Z7;A0A087X114;S4R3Z1;F5H079 MMAB Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial yes no 0 0 1 3 0 1 34.994 35.055 3 0.00015523 7565 20230619_1882_Aki_TMTPro18x_K_F3 93.152 80.867 44640 31175 45769 45761 53520 52059 56584 58580 80526 54600 65786 62751 65033 53677 55620 51531 76659 66646 41248 28675 46513 45098 55041 52312 57597 59275 79989 55687 68117 63026 65966 55584 57854 52683 73074 63177 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39242000 10845 2238 10251 20750 16629 16629 1 9606 Homo sapiens -0.024850318233802682 GPQLAAQNLGISLANLLLSK Unmodified 2020.1681 0.16807497 1501 A0A8I5KXV4;F5H345;A0A3B3IRR1;A0A3F2YNY7;P08397-4;P08397-3;P08397-2;P08397;Q68Y91 HMBS;PBGD Porphobilinogen deaminase yes no 0 0 0 7 0 1 67.193 67.215 3 1.1986E-29 20977 20230619_1887_Aki_TMTPro18x_K_F7 199.15 179.55 34523 27472 28029 33332 29152 27867 38325 36736 33690 37555 43927 40848 42761 36213 40804 42676 41448 44401 31867 25203 29062 33118 30398 28812 37969 36950 34993 37987 44523 41184 43577 37852 41574 42875 39672 42143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131950000 10846 1501 10252 20751 16630 16630 1 9606 Homo sapiens 0.198797651915811 GPQLFHMDPSGTFVQCDAR Oxidation (M) 2177.9623 0.96225765 1160 A0A109NGN6;P28066;Q5U0A0;P28066-2 PSMA5 Proteasome subunit alpha type-5;Proteasome subunit alpha type yes no 0 1 0 6 0 1 49.14 49.218 3 1.8611E-08 13562 20230619_1886_Aki_TMTPro18x_K_F6 120.11 117.1 24951 24900 26985 27793 34574 33673 30142 31416 68899 27326 28195 26608 32206 27217 28666 34411 27145 27939 23119 22808 27355 27916 35234 33570 31803 32134 66241 27920 30990 27094 32591 28427 29161 34088 25993 26602 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150870000 10847 1160 10253 20752 16631 16631 710 1 9606 Homo sapiens -0.0796049932164351 GPQLFHMDPSGTFVQCDAR Unmodified 2161.9673 0.96734302 1160 A0A109NGN6;P28066;Q5U0A0;P28066-2 PSMA5 Proteasome subunit alpha type-5;Proteasome subunit alpha type yes no 0 0 0 7.5 0.5 1 1 54.964 55.029 3 8.5404E-15 15725 20230619_1887_Aki_TMTPro18x_K_F7 160.02 152.57 63185 56657 68030 68467 59149 81693 77836 71919 145060 84005 66631 76686 89736 68066 69879 89987 80955 94153 58498 51954 68603 68352 62892 81341 79380 74477 140680 84196 73094 77854 89903 71715 72133 90241 77442 89334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 393410000 10848 1160 10253 20753;20754 16632 16632 1 9606 Homo sapiens -0.06716195459057417 GPQNAFFLVK Unmodified 1119.6077 0.60767976 2928 E9PKB7;Q59EF3;H0YE88;P28347 TEAD1 Transcriptional enhancer factor TEF-1 yes no 0 0 0 4 0 1 60.286 60.288 3 0.0013369 18439 20230619_1883_Aki_TMTPro18x_K_F4 100.02 64.058 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10849 2928 10254 20755 16633 16633 1 9606 Homo sapiens 0.052660222312852056 GPQNATDSYVHK Unmodified 1315.6157 0.61567826 3260 O43660-2;O43660;D6RA26;B7Z982 PLRG1 Pleiotropic regulator 1 yes no 0 0 0 6 0 1 37.933 38.009 3 2.6159E-05 8711 20230619_1886_Aki_TMTPro18x_K_F6 120.87 105.12 32609 25890 27906 35176 41747 38795 33274 36673 45540 39939 41940 46294 46575 43228 32625 44218 51970 51792 30111 23780 28978 34791 42018 38920 34421 37694 45562 40400 43410 46589 46771 44737 34551 44810 49536 49113 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58936000 10850 3260 10255 20756 16634 16634 1 9606 Homo sapiens -0.029504953099149134 GPQPPTVSPIR Unmodified 1147.635 0.63495714 3589 P46087;P46087-4;P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 1 0 1 42.971 42.971 2 0.0010115 11419 20230619_1880_Aki_TMTPro18x_K_F1 119.53 95.556 69214 54751 65149 69748 76854 94880 89152 83457 96473 53014 50654 53326 57968 49893 66642 62361 71449 56152 63956 50256 66751 69521 79315 93725 89339 85238 95914 55310 54509 54045 59384 52226 67847 62139 68210 53455 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49564000 10851 3589 10256 20757 16635 16635 1 9606 Homo sapiens 0.06704505771654112 GPQVQQPPPSNR Unmodified 1303.6633 0.66329715 2974 F5H365;Q15436;B4DSQ5;B4E0Q9;B4DF60;Q15436-2 SEC23A Protein transport protein Sec23A yes no 0 0 0 6 0.816 1 1 1 32.012 32.08 2 0.00059698 6113 20230619_1887_Aki_TMTPro18x_K_F7 102.06 83.281 4765 1616.1 6964 4479.3 7858.8 10932 9489.3 7868.6 8589 5747.9 9236.2 11144 9112.5 7390.9 8200.2 4995.5 10558 6943 4406.8 1495.1 6895.7 4369 8142.6 10479 9441.3 8193.8 8810.4 6091.6 9454.4 10930 9259.4 7619.9 8464.4 5181.2 10054 6587.1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 25400000 10852 2974 10257 20758;20759;20760 16636 16636 1 9606 Homo sapiens 0.02361203680948165 GPSFNQER Unmodified 933.43044 0.43044367 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DQN8 PRRC2C Protein PRRC2C yes no 0 0 0 3.5 0.5 1 1 34.087 34.147 2 0.0028615 7170 20230619_1883_Aki_TMTPro18x_K_F4 121.09 89.156 100720 69096 96228 100360 119450 138320 117540 119790 151280 64735 78106 62808 64725 59586 93255 57610 91762 55540 93007 63552 98514 99237 122300 136490 119610 122160 148970 68501 82948 63832 67914 61446 94028 57941 87561 52907 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75050000 10853 2894 10258 20761;20762 16637;16638 16638 2 9606 Homo sapiens -0.03893433318864936 GPSFPEPLREEQDLER Unmodified 1897.917 0.91700524 1273 H0Y5R6;A0A494C0S8;A0A1B0GVN9;A0A494C0Q8;P06132;A0A494C1D8;Q5T446;A0A494BZY8;A0A1B0GVZ4;A0A494C085;B4DEM5;B0AZT7 UROD Uroporphyrinogen decarboxylase yes no 0 0 1 2 0.816 1 1 1 49.807 49.852 3 0.036408 14460 20230619_1881_Aki_TMTPro18x_K_F2 48.177 33.616 47546 34314 43466 41311 54157 50353 42328 33346 49379 38565 35724 30181 49222 41079 49752 50456 51375 35983 43901 31491 44619 41260 55037 49877 43569 35413 49377 38506 37869 31441 49840 42500 50667 49750 49033 34386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 350380000 10854 1273 10259 20763;20764;20765 16639 16639 1 9606 Homo sapiens 0.0039634147908600426 GPSGCVESLEVTCR Unmodified 1549.6865 0.68647672 2024;1277 A0A1B0GVU9;Q9H3A5;Q9BUZ3;B4DDN1;Q96AW5;H7C0R3;A0A0U1RQX5;A0A0U1RQX9;Q53HS0;A8K3A8;P47897-2;P47897;B4DNN3 QARS Glutamine--tRNA ligase no no 0 0 0 3 0 1 45.39 45.466 3 3.4628E-05 12095 20230619_1882_Aki_TMTPro18x_K_F3 106.58 97.527 35159 35907 41561 42840 50288 54910 49988 45155 60434 55895 60010 52072 61301 47415 53526 46241 56032 53174 32610 32909 41830 42849 51524 54394 50728 47096 60954 55825 61584 52874 62114 49043 54660 46906 53567 50442 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161760000 10855 1277;2024 10260 20766 16640 16640 1 9606 Homo sapiens -0.06637906378909975 GPSGLLTYTGK Unmodified 1092.5815 0.58152458 3087 H7C0R7;Q9UHQ9 CYB5R1 NADH-cytochrome b5 reductase 1 yes no 0 0 0 3 0 1 53.394 53.446 3 0.0022531 15688 20230619_1882_Aki_TMTPro18x_K_F3 78.653 63.451 39131 46458 36631 49684 59468 55935 60986 55710 72744 34595 41538 26594 30519 34452 58739 37865 57467 38450 36267 42517 37844 49992 59939 56120 61694 56378 72054 35939 43560 27719 32924 35434 59038 38098 54865 36584 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43163000 10856 3087 10261 20767 16641 16641 1 9606 Homo sapiens 0.0389370826915183 GPSGLLVYQGK Unmodified 1117.6132 0.61315906 311 P00387-3;P00387;P00387-2;A0A8J8YWN6;A0A8I5KR71;A0A024R4X0;A0A8I5KW26;A0A8J8Z3C6;A0A8I5QKX1;Q6ZVI6;A0A8I5QKT9;A0A8I5KPU0;B1AHF3;A0A8I5KVD2 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form;NADH-cytochrome b5 reductase yes no 0 0 0 2.5 0.5 1 1 52.97 53.016 2 0.0042163 15462 20230619_1882_Aki_TMTPro18x_K_F3 113.15 77.928 228500 189230 212610 229160 219190 211460 251990 231020 258280 253460 270800 240240 297310 248200 252570 309600 287650 283350 211180 173580 217470 227970 227770 215740 252350 235360 263290 254580 278190 245010 300450 259020 259870 308500 274850 269420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222440000 10857 311 10262 20768;20769 16642 16642 1 9606 Homo sapiens 0.05905701023084475 GPSGQGQGQFLIQQVTLK Unmodified 1885.0058 0.005760665 1401 Q13724;A0A384MDR6;Q58F09;Q13724-2;A0A8I5KTK5;A0A3B3IRK6;A0A3B3IRW2;A8K9K4;A0A3B3IS52 MOGS;GCS1 Mannosyl-oligosaccharide glucosidase yes no 0 0 0 3 0 1 59.808 59.837 3 9.7316E-15 18364 20230619_1882_Aki_TMTPro18x_K_F3 168.29 149.21 38781 29829 31515 40490 36226 40731 41331 40544 49811 47374 50338 54878 51019 48706 52307 57984 55323 62575 35790 27402 32747 39999 37426 41157 41630 41627 50280 47747 51693 55159 52150 50914 53367 58360 52953 59359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65898000 10858 1401 10263 20770 16643 16643 1 9606 Homo sapiens 0.09865801509408811 GPSGSASSRPGVSATPPK Unmodified 1638.8325 0.83254733 2130 A8K940;Q66K74-2;Q66K74 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 1 3 0 1 35.322 35.38 3 0.0009056 7718 20230619_1882_Aki_TMTPro18x_K_F3 78.597 53.275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10859 2130 10264 20771 16644 16644 1 9606 Homo sapiens 0.038684354530005294 GPSGYGFNLHSDK Unmodified 1377.6313 0.63132832 2231 B2R6A3;O14745;B3KSV9;O14745-2 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF;Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 0 0 0 8 0 1 45.207 45.235 3 7.0208E-08 11603 20230619_1888_Aki_TMTPro18x_K_F8 130.72 96.832 75496 63891 72055 61135 43327 50081 79195 75735 81918 75318 77787 68057 71581 64247 70279 81626 99253 81238 69797 58479 72998 61935 48246 52108 77869 75591 83075 75904 79677 69349 73256 67313 73141 81691 94559 77230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29568000 10860 2231 10265 20772 16645 16645 1 9606 Homo sapiens -0.04238208792867226 GPSLASLEGEEDK Unmodified 1330.6252 0.62523989 1216 A0A140VK05;B4DN86;Q92667-2;Q92667;I3L0W0 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 0 0 0 2.5 0.5 1 1 52.095 52.134 3 1.3939E-06 15381 20230619_1881_Aki_TMTPro18x_K_F2 113.99 96.662 63971 50691 58709 65206 56094 63757 65470 63533 90995 74284 73978 68828 78738 65136 74449 83870 82637 84244 59101 46534 60079 64634 58795 64572 66242 65222 90532 74381 76873 70033 80011 68322 76285 83970 78998 80006 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73275000 10861 1216 10266 20773;20774 16646;16647 16646 2 9606 Homo sapiens -0.02684771815052045 GPSSSLNTPGSFR Unmodified 1305.6313 0.63132832 4622 Q9NXR1-1;Q9NXR1;X5DR54;I3L533;A0A6Q8PEY3;X5DP35;A0A6Q8PGV6;I3L3G9;A0A6Q8PG46;I3L2R9;I3L2T8;I3L522;A0A0J9YY14;I3L2R3 NDE1 Nuclear distribution protein nudE homolog 1 yes no 0 0 0 1 0 1 42.26 42.26 2 0.065532 11077 20230619_1880_Aki_TMTPro18x_K_F1 73.273 50.935 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10862 4622 10267 20775 16648 16648 1 9606 Homo sapiens -0.009262087928618712 GPSSVEDIK Unmodified 930.46583 0.46582612 1089;2882 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;Q9BTI9;Q9NX34;A0A024R3V9;E5RI98;A0A7I2V5J8 NPM1;hCG_37498 Nucleophosmin no no 0 0 0 4.56 1.83 1 2 2 2 1 1 44.182 44.252 2;3 0.0001204 11162 20230619_1888_Aki_TMTPro18x_K_F8 138.1 73.261 574350 368270 524980 540530 652080 658340 620400 606200 760840 668730 785700 775370 844080 668050 704450 610300 853430 786310 529990 338870 539320 533090 666240 655550 631690 624580 767900 675980 807290 778390 852680 690070 726400 624480 814650 745230 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 14442000000 10863 1089;2882 10268 20776;20777;20778;20779;20780;20781;20782;20783;20784 16649;16650;16651;16652;16653 16653 5 9606 Homo sapiens -0.0021881558171799043 GPSVDWGK Unmodified 844.40792 0.40791731 1248 Q16851-2;A0A140VKE1;A0A7I2YQ74;Q16851;E7EUC7;B4DUP2;A0A087WYS1;B2RAN1;Q53QE9;A0A7I2V676;C9JNZ1;A0A7I2V4T0;C9JVG3;C9JWG0;C9JQU9;A0A7I2V2Q3;C9JUW1;C9JTZ5;F2Z3H1 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes no 0 0 0 6.5 0.5 1 1 47.902 47.986 2 0.034859 12691 20230619_1887_Aki_TMTPro18x_K_F7 75.738 41.942 118180 88476 100240 104570 107340 127400 126580 124240 138930 125950 154590 147960 139820 116230 129330 139650 165810 151120 109090 81169 103480 104610 111560 127010 126890 127180 141350 127870 157170 148180 142680 122190 133760 140570 158190 143460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96262000 10864 1248 10269 20785;20786 16654 16654 1 9606 Homo sapiens -0.020510327164743103 GPSWDPFR Unmodified 960.44537 0.44536545 3383 V9HW43;P04792;A0A6Q8PFK8;A0A6Q8PGK1;A0A6Q8PHJ6;A0A6Q8PFE7;A0A6Q8PF43;A0A6Q8PHA6;A0A6Q8PH65;A0A6Q8PGY2;A0A8E9ZT92;A0A8E9ZUD7 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 0 0 0 7.5 0.5 1 1 55.324 55.385 2 0.021937 15895 20230619_1887_Aki_TMTPro18x_K_F7 87.284 41.972 426850 310220 407630 483610 387860 613470 464030 451460 592210 621590 552260 581850 633480 559680 620890 630810 604460 641820 394270 285510 416100 475340 408210 606060 467390 476950 594870 618110 572350 591470 643480 581820 630730 633410 578760 609350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 541360000 10865 3383 10270 20787;20788 16655 16655 1 9606 Homo sapiens -0.03643941450854982 GPSWDPFRDWYPHSR Unmodified 1901.8598 0.85976513 3383 V9HW43;P04792;A0A6Q8PFK8;A0A6Q8PGK1;A0A6Q8PHJ6;A0A6Q8PFE7;A0A6Q8PF43;A0A6Q8PHA6;A0A6Q8PH65;A0A6Q8PGY2;A0A8E9ZT92 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 0 0 1 2.5 0.5 1 1 57.112 57.136 4 9.481E-19 17247 20230619_1882_Aki_TMTPro18x_K_F3 210.9 193.65 152290 123270 135880 154990 127340 141040 127530 133490 164500 190380 155080 187840 205250 167790 196140 210490 185470 219680 140690 113120 139350 153710 133060 143530 129780 138440 165390 189250 162010 189990 207390 176060 199110 211310 177800 208430 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 236660000 10866 3383 10271 20789;20790 16656;16657;16658 16657 3 9606 Homo sapiens -0.05509036215971719 GPSYGLSAEVK Unmodified 1106.5608 0.56078914 3933 Q15417;Q15417-3;B4DN57;Q6FHE4;Q6FHC3;Q53GK7;B2RWM5;B4DDF4;B4DHU5;K7ES69;A0A087X271;B4DUT8;Q99439-2;Q99439;H3BVI6 CNN3;CNN2 Calponin-3;Calponin;Calponin-2 yes no 0 0 0 6.5 0.5 1 1 47.852 47.936 2 3.5858E-06 13001 20230619_1886_Aki_TMTPro18x_K_F6 191.4 139.67 669210 576100 604760 572530 459920 528380 468010 447880 509480 448200 471380 280510 379320 294880 441440 457960 449060 238480 618510 527420 617150 578370 489810 536190 473160 463400 514960 448080 480240 293760 392860 312260 448250 445340 428120 229610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 343820000 10867 3933 10272 20791;20792 16659;16660 16659 2 9606 Homo sapiens 0.011771178894605328 GPTEADELMK Unmodified 1089.5012 0.50122535 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;Q0PHS4 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 2.5 0.5 1 1 48.347 48.418 2 5.1536E-17 13438 20230619_1882_Aki_TMTPro18x_K_F3 203.19 161.2 132660 100290 102180 113490 143350 182810 154520 147010 171070 178650 211900 204100 196830 165810 194110 204920 206980 225430 122370 91965 107080 114420 146220 178720 155620 153460 174950 179640 214780 204800 201210 174400 198210 206410 198040 213830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169660000 10868 1464 10273 20793;20794 16661;16662 16662 2 9606 Homo sapiens -0.03994521116214855 GPTEADELMK Oxidation (M) 1105.4961 0.49613997 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;Q0PHS4 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 1 0 2.5 0.5 1 1 43.3 43.375 3 0.0096249 11101 20230619_1882_Aki_TMTPro18x_K_F3 66.962 54.748 48699 39810 46063 53327 63604 65847 59540 66568 68626 64330 74565 75248 73157 64537 64768 72167 82744 77618 45010 36556 47318 52894 64548 65647 60563 67865 69626 65462 76160 75543 74340 67318 67037 72688 78959 73683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198660000 10869 1464 10273 20795;20796 16663 16663 968 1 9606 Homo sapiens -0.052388249788464236 GPTGPPSTLPLSTQTSSGSSTLSK Unmodified 2287.1543 0.15433498 935 A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBF7 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 2 0 1 52.692 52.725 3 2.0396E-34 15653 20230619_1881_Aki_TMTPro18x_K_F2 200.27 180.72 10774 11667 10922 10400 10705 10282 9327.6 10111 10438 12740 13448 14204 15036 14698 12657 14342 16829 15125 9983.3 10664 11071 10619 11088 10418 9530.9 10412 10706 12778 13729 14367 15198 15118 13150 14460 16050 14363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71467000 10870 935 10274 20797 16664 16664 1 9606 Homo sapiens 0.06224398111089613 GPTISLTQIV Unmodified 1027.5914 0.59136099 1011 B4DWM8;A0A0C4DGX8;Q8NF19;B3KR70;A0A384MQW4;Q15904 ATP6AP1;FLJ00383 V-type proton ATPase subunit S1 yes no 0 0 0 8 0 2 63.802 63.824 2 0.0096747 19442 20230619_1888_Aki_TMTPro18x_K_F8 79.469 40.677 34523 34881 38734 30692 25569 40685 37690 35817 49804 36620 36756 29198 38487 31810 39845 38591 49570 42181 32001 31887 38768 31518 28031 40265 37676 36940 49480 36783 38357 30105 39305 33108 41018 38875 47283 40053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95247000 10871 1011 10275 20798;20799 16665;16666 16665 2 9606 Homo sapiens 0.07866896274504143 GPTLTVYK Unmodified 877.49092 0.49091866 898 A0A590UJ56;A0A590UJR3;A0A590UJ50;A0A090N7U0;Q13616;A0A590UJ21;B3KTW0;A0A590UJC4;B4DLA3 CUL1 Cullin-1 yes no 0 0 0 2 0 1 48.746 48.811 2 0.0049663 13884 20230619_1881_Aki_TMTPro18x_K_F2 124.08 65.502 85452 91367 77797 73201 166880 227750 128230 112310 233010 26547 24140 27105 27908 27097 36460 26887 94239 28545 79108 83458 81053 77416 165840 215830 134450 120340 222480 32017 34774 27556 28998 27928 40022 27151 89154 27335 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46497000 10872 898 10276 20800 16667 16667 1 9606 Homo sapiens 0.047272840115169856 GPTPAILESLISINNK Unmodified 1665.9301 0.93013611 1858 A0A8V8TRG9;P42345;A0A8V8TQM6;A0A8V8TQ52;B4E2H2 MTOR Serine/threonine-protein kinase mTOR yes no 0 0 0 3 0 1 64.343 64.375 3 7.32E-09 20282 20230619_1882_Aki_TMTPro18x_K_F3 142.45 114.12 21227 18327 20971 22841 20095 20879 26091 22003 23445 23015 26729 28185 25907 24975 26393 29157 23262 31669 19633 16813 21325 22672 21078 21293 25873 22449 24157 23361 27252 28276 26503 26076 26677 29366 22345 30022 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25298000 10873 1858 10277 20801 16668 16668 1 9606 Homo sapiens 0.12380824329147799 GPTPFNQNQLHQLR Unmodified 1648.8434 0.84338678 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A994J4Z2;Q59FZ6;A0A2R8YGP5;A5D6X0 SMARCA4 Transcription activator BRG1 yes no 0 0 0 2.5 0.5 1 1 43.012 43.085 3 9.072600000000001E-29 10964 20230619_1882_Aki_TMTPro18x_K_F3 203.7 176.05 182520 160100 172490 172900 165440 202300 201850 198820 240230 172930 160610 157210 187680 162040 174590 221760 223060 214570 168770 146660 175990 174040 173590 202240 202540 202640 239220 175830 169720 160640 190200 170160 180700 221320 212890 203910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 309510000 10874 1348 10278 20802;20803 16669;16670 16670 2 9606 Homo sapiens 0.044918826179355165 GPTSAELLNR Unmodified 1056.5564 0.55637247 4284 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 yes yes 0 0 0 6 0 1 42.189 42.284 2 3.4167E-05 10465 20230619_1886_Aki_TMTPro18x_K_F6 131.5 93.343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10875 4284 10279 20804 16671 16671 1 9606 Homo sapiens 0.030356534665770596 GPTVSNIR Unmodified 842.46102 0.46101552 2112 A8K800;Q9H7B2;Q5VXN0;B4DWS5 RPF2 Ribosome production factor 2 homolog yes no 0 0 0 7 0.816 1 1 1 35.132 35.17 2 0.0013766 7363 20230619_1887_Aki_TMTPro18x_K_F7 143.61 74.178 186810 107950 174570 191720 231070 234410 218460 221330 257350 172720 185020 167710 199840 157970 173930 149380 224470 173010 172330 99632 179280 187140 235110 233390 222130 225680 256880 177190 193760 170200 202260 162930 179940 151680 213930 164270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168930000 10876 2112 10280 20805;20806;20807 16672;16673 16672 2 9606 Homo sapiens 0.033483450661947245 GPVEGYEENEEFLR Unmodified 1666.7475 0.74748029 321 A0A024R565;Q9UI30-2;Q9UI30 HSPC152;TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes no 0 0 0 1.5 0.5 1 1 52.661 52.677 2 2.3867E-36 15425 20230619_1880_Aki_TMTPro18x_K_F1 304.34 290.18 131830 111040 120430 117430 104870 130180 120800 119450 123040 152080 149490 140080 173200 131350 131860 179990 155840 157900 121830 101720 123040 118310 110720 130450 121020 123640 126430 151540 153070 142540 173940 138410 136400 178710 148890 150200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 399290000 10877 321 10281 20808;20809 16674;16675 16674 2 9606 Homo sapiens -0.05922354803487906 GPVFAGDVSSSVR Unmodified 1276.6412 0.64116473 1604 A0A6I8PRJ0;A0A6I8PLG0;A0A6I8PRQ0;A0A6I8PUE4;H0Y5C0;B1ALU1;A0A8I5KUX3;A0A6I8PIV6;A0A6I8PRM6;B1ALU3;A0A6I8PTT2;O95490-3;O95490-7;O95490-5;O95490;O95490-2;O95490-4;O95490-6 ADGRL2;LPHN2 Latrophilin-2 yes no 0 0 0 6.5 0.5 1 1 47.137 47.221 2 4.8144E-11 12305 20230619_1887_Aki_TMTPro18x_K_F7 190.57 171.3 49511 44048 45432 46401 43827 61397 59657 51028 63183 69244 63696 53515 69703 56365 62380 69828 62455 70403 45775 40342 46500 46878 46180 60695 59317 53333 64228 68542 65526 55171 70575 58798 63610 69963 59810 66834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73306000 10878 1604 10282 20810;20811 16676 16676 1 9606 Homo sapiens 0.013909792125105014 GPVFAPPYEPLPENVK Unmodified 1752.9087 0.90867238 2724 P11387;B9EG90 TOP1 DNA topoisomerase 1 yes no 0 0 0 6.5 0.5 1 1 61.216 61.263 3 0.016481 18345 20230619_1887_Aki_TMTPro18x_K_F7 57.414 32.072 166140 141350 149280 163370 152300 196380 162680 177000 193400 185330 172660 147210 243150 151090 190900 244480 188190 216000 153530 129580 153200 163620 158540 195580 164430 182300 194570 185750 181010 151580 243050 160930 195200 242390 180280 205350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 724650000 10879 2724 10283 20812;20813 16677 16677 1 9606 Homo sapiens 0.06233439300399368 GPVGLEGLLTTK Unmodified 1183.6812 0.68123863 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 1.5 0.5 1 1 61.808 61.813 2 1.8406E-06 19410 20230619_1881_Aki_TMTPro18x_K_F2 175.15 126.65 209900 179650 207230 213980 181020 236910 212220 221800 231440 258200 245730 265190 293350 230650 251970 303310 287090 305850 194120 164740 210420 213610 191240 237410 212890 228580 235480 259150 253670 267720 295820 243010 259170 303600 274480 290400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76746000 10880 3654 10284 20814;20815 16678;16679 16679 2 9606 Homo sapiens 0.09674525883065144 GPVKPTGGPGGGGTQTQQQMNQLK Oxidation (M) 2381.1758 0.17575589 2256 P26196;B2R858;Q8IV96 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 1 1 3 0 1 40.755 40.814 4 8.7185E-19 9925 20230619_1882_Aki_TMTPro18x_K_F3 151.82 132.44 55099 46503 49757 60736 57225 53178 58297 52475 51592 64029 69104 64553 72404 56341 68539 65571 63166 58537 50918 42685 51154 60051 58784 54363 58521 54008 53698 64077 70204 65241 73547 58889 69448 65373 60456 55690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76973000 10881 2256 10285 20816 16680 16680 1401 1 9606 Homo sapiens 0.04041504658925987 GPVLGPMVYAICYCPLPR Unmodified 2062.0202 0.020230217 3316 Q6UQL6;O75792;Q6IBG3;A0A2R8Y606;A0A2R8Y658 RNASEH2A;JUNB Ribonuclease;Ribonuclease H2 subunit A yes no 0 0 0 7 0 1 64.019 64.049 3 1.8243E-06 19632 20230619_1887_Aki_TMTPro18x_K_F7 102.28 96.734 24043 24364 20258 21708 19989 22747 22440 22960 18865 25497 23643 24514 28447 20240 26247 33111 27258 28286 22236 22275 20898 22177 20852 22948 22387 23507 19651 25582 24257 24801 28748 21712 26823 32773 26077 26914 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16991000 10882 3316 10286 20817 16681 16681 1 9606 Homo sapiens 0.031700910700692475 GPVLQLHDLK Unmodified 1118.6448 0.64479354 245 B2R642;A8K6A6;A0A024R3I5;P43121;B3KXZ9;P43121-2 MCAM Cell surface glycoprotein MUC18 yes no 0 0 0 4.5 3.5 1 1 49.952 49.989 3 0.00043101 14374 20230619_1880_Aki_TMTPro18x_K_F1 105.86 86.62 343200 311080 337830 346400 164110 219920 251060 257090 332100 323270 349970 344110 329430 298430 326340 410930 394980 382510 317520 285030 341030 345470 187010 232920 250940 262100 334300 323780 357280 347020 336930 315150 336160 409280 377170 363660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 326250000 10883 245 10287 20818;20819 16682;16683 16682 2 9606 Homo sapiens 0.09021693777026485 GPVLQLHDLKR Unmodified 1274.7459 0.74590457 245 B2R642;A8K6A6;A0A024R3I5;P43121;B3KXZ9;P43121-2 MCAM Cell surface glycoprotein MUC18 yes no 0 0 1 3 0 1 44.819 44.892 4 0.00063436 11795 20230619_1882_Aki_TMTPro18x_K_F3 96.103 80.212 144010 156400 167060 151560 126480 133010 177180 167810 129430 136610 129940 100730 109730 88350 178930 119240 118420 92202 133610 143050 167090 153430 135660 136830 174310 168230 134600 138530 132400 103580 115820 93193 177060 118020 113710 87957 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 494180000 10884 245 10288 20820 16684 16684 1 9606 Homo sapiens 0.11952145479745013 GPVPAKPTVLFEK Unmodified 1381.7969 0.79693709 2130 A8K940;Q66K74-2;Q66K74 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 1 3 0 1 54.3 54.347 3 0.00014146 16072 20230619_1882_Aki_TMTPro18x_K_F3 100.45 65.733 119740 101860 113980 116390 95399 117520 108900 110820 111450 150690 143690 139480 156130 123440 130330 161180 161750 156070 110700 93372 116000 116400 101020 118610 109190 114740 114880 149740 146410 141570 157680 129910 134890 160980 154420 148310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44605000 10885 2130 10289 20821 16685 16685 1 9606 Homo sapiens 0.12131049733943655 GPVPTFQPFQR Unmodified 1272.6615 0.66150624 1299 A0A1U9X839;A0A1U9X830;P18615;P18615-3;H9ZYJ1;A0A0A0MSN9;B7Z6T4;P18615-4;E9PD43;A0A0A0MT02;A0A0G2JI50;B4DZZ3;A2ABK4 NELFE;NELF-E;RDBP Negative elongation factor E yes no 0 0 0 4 0 1 54.388 54.403 2 1.6435E-05 15971 20230619_1883_Aki_TMTPro18x_K_F4 145.17 122.27 63324 57987 57317 70852 61494 67035 67686 65873 71276 67710 73060 67466 69025 67089 68394 76519 85039 79345 58552 53175 58869 70433 63711 68059 68003 67452 72470 68337 74672 68530 70623 69686 70519 76880 81164 75353 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 247060000 10886 1299 10290 20822 16686 16686 1 9606 Homo sapiens 0.03608194662979258 GPVSGTEPEPVYSMEAADYR Oxidation (M) 2169.9525 0.95246405 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;B4E358;H0YCD9;H0YEV2 CTTN Src substrate cortactin yes no 0 1 0 2.5 0.5 1 1 48.021 48.096 3 3.0517E-16 13551 20230619_1881_Aki_TMTPro18x_K_F2 154.74 150.79 26695 20198 25656 34928 32591 32177 31538 34492 31826 40379 42738 40858 40649 33739 42380 43843 40724 42093 24664 18611 26305 33993 33241 32789 31886 35233 32879 40480 43241 41226 41620 35573 42983 43796 38990 39993 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 341280000 10887 1413 10291 20823;20824 16687 16687 879 1 9606 Homo sapiens -0.08571408846046324 GPVSPSVSFQPLAR Unmodified 1440.7725 0.77251325 4167 Q7Z434-4;Q7Z434 MAVS Mitochondrial antiviral-signaling protein yes no 0 0 0 3 0 1 53.245 53.299 2 0.0028679 15630 20230619_1882_Aki_TMTPro18x_K_F3 108.9 78.216 35471 32119 36035 40850 40426 41690 43299 44849 50572 36604 35463 41007 44636 33386 44688 42206 42780 46613 32825 29467 36653 40547 41700 42169 43708 45381 50481 37584 37550 41168 45242 35183 45321 42525 40977 44212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13471000 10888 4167 10292 20825 16688 16688 1 9606 Homo sapiens 0.06975789580428682 GPVTDVAYSHDGAFLAVCDASK Unmodified 2279.0528 0.052846792 4000 Q59ER5;Q53H17;Q53GN4;A0A8V8TNU2;A0A8V8TNT7;O75083;A0A8V8TP22;A0A8V8TQ74;A0A8V8TQK0;V9HWG7;B3KXN4;B4DY05;A0A8V8TQ69;O75083-3 WDR1;HEL-S-52 WD repeat-containing protein 1 yes no 0 0 0 6.5 0.5 1 1 55.759 55.836 3;4 1.1147E-16 16356 20230619_1886_Aki_TMTPro18x_K_F6 109.03 99.495 52519 42951 51854 55025 49635 58748 63019 58521 63316 77070 69848 67198 81632 60635 69590 77383 66003 66543 48558 39422 52730 54626 52106 59109 62773 60299 64830 76569 71856 68441 82291 63684 70821 76871 63190 63316 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178170000 10889 4000 10293 20826;20827 16689;16690 16689 2 9606 Homo sapiens -0.03551751792383584 GPVTSHGFSVK Unmodified 1114.5771 0.57710791 3984 Q53EP0-2;Q53EP0 FNDC3B Fibronectin type III domain-containing protein 3B yes no 0 0 0 2 0 1 41.739 41.816 3 0.012553 10642 20230619_1881_Aki_TMTPro18x_K_F2 65.179 50.76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10890 3984 10294 20828 16691 16691 1 9606 Homo sapiens 0.024402438462402642 GPVVLAEDFLDIMGQPINPQCR Unmodified 2468.2192 0.21920061 1233 A0A140VK65;P21281;Q59HF3;B4DFM5;H0YC04 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 8 0 1 68.142 68.161 3 5.0636E-05 21141 20230619_1888_Aki_TMTPro18x_K_F8 79.311 75.973 0 1107.1 0 0 714.02 0 1197.9 1065.6 0 1131 0 0 841.88 987.89 0 1023.5 1546.3 0 0 1001.7 0 0 688.25 0 1140.8 1014.8 0 1102.2 0 0 796.48 986.56 0 968.15 1453.8 0 0 1 0 0 1 0 1 1 0 1 0 0 1 1 0 1 1 0 2551400 10891 1233 10295 20829 16692 16692 1 9606 Homo sapiens 0.04381978111769058 GPYPYNQPK Unmodified 1062.5134 0.51344502 582 B0AZM4;A8K6F0;A0A024R9L1;O60306 AQR Intron-binding protein aquarius yes no 0 0 0 4.5 3.5 1 1 42.259 42.262 2;3 0.026497 11072 20230619_1880_Aki_TMTPro18x_K_F1 60.436 41.656 17395 12467 16380 21775 24161 24341 20710 23855 29550 25108 30169 31543 29302 25099 22894 36300 32592 29594 16065 11492 16870 21236 24388 24398 21358 24431 29613 25509 30882 31531 29641 26676 24003 35883 31069 28190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12719000 10892 582 10296 20830;20831 16693;16694 16693 2 9606 Homo sapiens -0.015311165908542534 GQAAVQQLQAEGLSPR Unmodified 1651.8642 0.86418181 1468;3317 V9HW40;Q53F60;O75828;A0A384NL53;P16152;E9PQ63;A8MTM1;P16152-2 HEL-S-25;CBR3;CBR1 Carbonyl reductase [NADPH] 3;Carbonyl reductase [NADPH] 1 no no 0 0 0 7 0.816 1 1 1 49.05 49.126 3 1.8216E-15 13520 20230619_1886_Aki_TMTPro18x_K_F6 192.4 168.65 146380 128190 163490 158850 158590 177370 154550 170250 176530 182720 210140 178750 218850 166420 174940 207140 228980 223950 135540 117590 164540 158180 165000 177790 156900 174700 179970 183870 214130 181410 220890 174370 181820 208330 218530 212550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2807700000 10893 3317;1468 10297 20832;20833;20834 16695 16695 1 9606 Homo sapiens 0.06432428206926488 GQADYEEVKK Unmodified 1165.5615 0.56151742 1365 P39880-3;P39880-9;A0A2R8Y852;A0A2R8YDI1;Q13948-10;Q13948-2;Q13948-9;Q13948;P39880-6;P39880-4;P39880-5;P39880-2;P39880;Q3LIA3 CUX1;Nbla10317 Homeobox protein cut-like 1;Protein CASP yes no 0 0 1 3.5 0.5 1 1 40.342 40.391 3 0.0032992 9702 20230619_1883_Aki_TMTPro18x_K_F4 78.548 58.558 67662 41122 68758 73878 84548 93594 75084 85253 107060 84502 114960 129640 109620 99513 107160 74090 126320 116310 62473 37951 70019 72114 86377 92894 77277 87633 107460 86850 117430 128420 111980 102300 109880 77354 120610 110060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27178000 10894 1365 10298 20835;20836 16696 16696 1 9606 Homo sapiens -0.014640874614769928 GQAFVIFK Unmodified 908.51199 0.51198846 2252;3412 B2R802;P09012;M0R268;M0R0G9;M0QXK2;M0R221;M0R2B8;M0QZG7;P08579;Q86YK2 SNRPA;SNRPB2 U1 small nuclear ribonucleoprotein A;U2 small nuclear ribonucleoprotein B'' no no 0 0 0 4 0 1 58.736 58.738 2 0.0016547 17779 20230619_1883_Aki_TMTPro18x_K_F4 148.98 101.17 510300 488100 456210 426870 571690 1249900 150400 545040 760290 61314 52265 45615 64515 41838 247260 65122 68176 40074 471940 446270 469810 446590 580150 1183600 195790 590920 709940 89463 87504 47383 74270 44547 237310 64256 66767 38431 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 527060000 10895 2252;3412 10299 20837 16697 16697 1 9606 Homo sapiens 0.054072941110462125 GQAGALERPVLIHR Unmodified 1515.8634 0.86339394 4455 Q9BW92;U3KQG0;Q9BW92-2;Q6ST48;Q9H045 TARS2;DKFZp667F1511 Threonine--tRNA ligase, mitochondrial yes no 0 0 1 2 0 1 37.844 37.907 4 1.721E-08 8868 20230619_1881_Aki_TMTPro18x_K_F2 159 125.32 51074 68429 57359 50387 56777 71721 66048 62444 67643 70417 119070 134840 89169 77372 100230 77654 120640 123400 47463 62436 57712 52743 59310 70747 66149 64673 70758 72645 118550 131930 92482 81725 102730 80662 115250 116710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156130000 10896 4455 10300 20838 16698 16698 1 9606 Homo sapiens 0.12609678348530906 GQASLYGK Unmodified 822.42357 0.42356738 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 0 8 0 1 41.705 41.702 2 0.0094665 10187 20230619_1888_Aki_TMTPro18x_K_F8 101.64 58.617 32852 20199 41761 42870 49912 64738 43820 49827 46642 34820 46260 46208 42548 38933 47233 21967 53891 42070 30399 18689 41821 41661 51087 63383 44653 51510 47297 36366 47334 46116 43787 39516 48164 23564 51417 39788 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12640000 10897 4016 10301 20839 16699 16699 1 9606 Homo sapiens 0.00525253800583414 GQAVDYEGSR Unmodified 1080.4836 0.48360145 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 1.5 0.5 1 1 33.802 33.831 2 5.7065E-05 7206 20230619_1881_Aki_TMTPro18x_K_F2 166.66 137.74 166260 93333 209730 205510 314710 363570 245870 321240 276410 219150 364300 454160 321560 302570 346250 146010 446200 459880 153770 86453 211010 200160 316780 354320 253110 328100 283010 234030 368440 444630 330940 309010 356010 167460 426050 433420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 182670000 10898 909 10302 20840;20841 16700;16701 16701 2 9606 Homo sapiens -0.0534210032685678 GQCDLELINVCNENSLFK Unmodified 2151.9929 0.99288907 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 6.5 0.5 1 1 62.479 62.523 3 2.6620999999999996E-19 19247 20230619_1886_Aki_TMTPro18x_K_F6 190.24 173.93 226290 197840 211400 213470 162920 204020 244760 168570 208610 243320 195390 225300 258620 184670 212740 307260 233570 241590 209220 181240 215330 214260 175330 206280 240800 176960 214320 241320 204100 228150 259560 198390 218820 302820 223330 230130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1336000000 10899 826 10303 20842;20843 16702 16702 1 9606 Homo sapiens -0.037027657273029035 GQDHCGIESEVVAGIPR Unmodified 1822.8632 0.86319553 226 P07858;E9PHZ5;A0A024R374;A8K2H4;B4DL49;A0A7P0NGZ6;A0A7I2V668;A0A7I2V440;E9PSG5;A0A7I2V4Z9;B4DMY4;B3KUJ8;R4GMQ5 CTSB Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes no 0 0 0 3 0.816 1 1 1 47.489 47.555 3 1.7846999999999998E-38 12994 20230619_1882_Aki_TMTPro18x_K_F3 257.02 249.31 324280 243890 301850 318360 387680 428260 524600 517850 529460 453170 497820 522510 520820 415050 521070 532910 524080 592600 299530 223970 310080 316930 399440 426630 520850 520890 537510 463470 513580 523780 530650 438100 530110 536910 501880 561970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1750099999.9999998 10900 226 10304 20844;20845;20846 16703;16704 16703 2 9606 Homo sapiens -0.015321542242872965 GQDIEYIEIR Unmodified 1234.6194 0.61936665 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494BZX8;H7C0V2 RAD50 DNA repair protein RAD50 yes no 0 0 0 2.5 0.5 1 1 51.775 51.813 2 1.5336E-06 15229 20230619_1881_Aki_TMTPro18x_K_F2 171.87 122.06 153910 119130 135480 144640 135810 146410 153360 148120 159980 173420 182080 197150 185740 164150 183660 203320 203480 211980 142130 109300 139210 144020 141520 147980 153860 151920 163560 174580 186070 197930 189410 172450 188000 204110 194560 201220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176050000 10901 4309 10305 20847;20848 16705;16706 16705 2 9606 Homo sapiens 0.011441744639114404 GQDMETEAHQNK Unmodified 1386.5834 0.58339185 2561 B4DP27;Q6FHT8;Q15363;F5GX39;B4E020 RNP24;TMED2 Transmembrane emp24 domain-containing protein 2 yes no 0 0 0 2 0 1 33.009 33.067 3 2.1375E-05 6906 20230619_1881_Aki_TMTPro18x_K_F2 112.44 87.742 6853.6 3388.4 8493.5 10616 9743.2 15881 9597.7 14443 14918 8937.1 13786 19750 14961 18127 12953 9798.7 20786 31143 6334.2 3164.5 8530.1 10176 10064 15593 9860.2 14694 14824 9667.6 14287 19479 15182 18316 13623 11181 19884 29316 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12631000 10902 2561 10306 20849 16707 16707 1 9606 Homo sapiens -0.09443650775210699 GQDSIEPVPGQK Unmodified 1253.6252 0.62518031 4583 Q9NR50;Q9NR50-3;Q9NR50-2 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes no 0 0 0 3.5 0.5 1 1 43.367 43.424 3 0.019175 11112 20230619_1882_Aki_TMTPro18x_K_F3 44.511 32.243 130160 102110 124010 147930 159290 169470 149640 156770 193190 149490 177330 198940 187780 159770 155500 184870 193170 188870 120270 93858 127150 145820 162440 169410 152780 160850 193580 153050 183250 198370 189830 167380 160930 185530 184430 179360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135800000 10903 4583 10307 20850;20851 16708;16709 16708 2 9606 Homo sapiens 0.008512729756148474 GQDSLSTDTGQSR Unmodified 1350.6012 0.60115041 4085 Q5W0V3-2;Q5W0V3 FAM160B1 Protein FAM160B1 yes no 0 0 0 2 0 1 33.015 33.073 2 0.0049169 6899 20230619_1881_Aki_TMTPro18x_K_F2 99.5 86.147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10904 4085 10308 20852 16710 16710 1 9606 Homo sapiens -0.060126122487190514 GQECEYPPTQDGR Unmodified 1535.6311 0.63107033 1169 F8VQZ7;A0A140VJE3;P50579-2;P50579;F8VRR3;G3V1U3;B3KWL6;F8VZX9;F8VY03 METAP2 Methionine aminopeptidase 2;Methionine aminopeptidase yes no 0 0 0 1 0 1 34.233 34.233 2 8.0311E-05 7671 20230619_1880_Aki_TMTPro18x_K_F1 117.23 102.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10905 1169 10309 20853 16711 16711 1 9606 Homo sapiens -0.11531996575058656 GQEETPSWEHILFTCCHNR Unmodified 2400.0375 0.037547853 4267 V9HWF3;Q8TCD5;A0A384NYP3;J3KSY6 HEL74;NT5C 5'(3')-deoxyribonucleotidase, cytosolic type yes no 0 0 0 6 0 1 51.43 51.507 4 0.0055241 14549 20230619_1886_Aki_TMTPro18x_K_F6 67.644 66.498 75282 56536 67786 85261 70196 85979 82128 80287 100280 77966 82066 83102 82531 82327 93674 82826 116390 98979 69519 52004 69640 83691 73151 86700 82656 82385 100330 79139 85120 84107 84875 84948 96239 84170 111020 93904 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204090000 10906 4267 10310 20854 16712 16712 1 9606 Homo sapiens -0.10646941861250525 GQELAFPLSPDWQVDYESYTWR Unmodified 2686.234 0.23398228 3510 Q53YD7;P26641;P26641-2;B4DUP0 EEF1G Elongation factor 1-gamma yes no 0 0 0 7 0 1 65.131 65.158 3 1.5859E-30 20174 20230619_1887_Aki_TMTPro18x_K_F7 196.83 194.43 26431 19125 23726 23171 17490 23495 20973 18477 27716 25994 21210 26605 27186 28340 33972 32639 27269 34884 24401 17552 24231 23074 18807 23614 21156 19439 27608 25907 22387 27027 27913 29385 34051 32861 26208 33082 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142660000 10907 3510 10311 20855 16713;16714 16714 2 9606 Homo sapiens -0.04168535214876101 GQELIYAGMPITEVFK Unmodified 1794.9226 0.92260789 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 4.5 3.5 1 1 64.108 64.118 3 0.025528 19607 20230619_1888_Aki_TMTPro18x_K_F8 48.677 33.244 89163 69723 79362 88732 66853 84702 81732 83888 100520 90532 85069 125730 136170 109970 95530 145390 131360 164200 82349 64000 81310 87989 70969 85910 82147 85974 100770 92230 90494 125460 135430 115860 100120 146410 125570 155640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 914520000 10908 161 10312 20856;20857 16715;16716 16716 2 9606 Homo sapiens 0.05694348737188193 GQEQLLENIK Unmodified 1170.6245 0.62445203 2918 E9PI02;E9PMQ6;Q53HT3;Q00613-2;Q00613;A0A087X1F9 HSF1 Heat shock factor protein 1 yes no 0 0 0 5 0 1 53.075 53.146 3 0.025462 15006 20230619_1885_Aki_TMTPro18x_K_F5 58.674 28.124 27466 23591 25837 28115 25406 35840 44106 41701 31163 35272 31689 33982 36355 27698 40243 37025 39975 41295 25393 21633 26417 28133 26943 35762 42969 42013 32519 35921 32739 34344 37120 29298 40819 37303 38260 39172 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94879000 10909 2918 10313 20858 16717 16717 1 9606 Homo sapiens 0.04596478326561737 GQESFKK Unmodified 822.42357 0.42356738 1089;2882 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;Q9BTI9;Q9NX34;A0A024RAP1;V9HVU7;E5RI98;A0A7I2V5J8 NPM1;CLEC2D Nucleophosmin no no 0 0 1 8 0 1 37.622 37.608 3 0.037595 8521 20230619_1888_Aki_TMTPro18x_K_F8 68.224 31.828 187640 65492 343980 315980 584550 471240 356320 534190 254590 166200 447960 487240 197040 297830 479910 61786 425900 327720 174080 62146 339610 300160 579920 465910 370130 531000 272150 197050 440310 473350 223230 300480 477660 82234 407340 308810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179950000 10910 1089;2882 10314 20859 16718 16718 1 9606 Homo sapiens 0.005252538005720453 GQESSSDQEQVDVESIDFSK Unmodified 2212.9608 0.96078012 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 2 0 1 55.036 55.057 3 1.7869E-05 16607 20230619_1881_Aki_TMTPro18x_K_F2 93.215 84.396 12300 10844 13354 13673 11402 17167 15378 16100 17553 16646 16339 17767 18428 15979 16326 17890 16738 17423 11387 9948.5 13458 13622 12139 17055 15345 16531 17711 16830 16923 17921 18643 16640 16669 17919 16016 16551 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40210000 10911 4372 10315 20860 16719 16719 1 9606 Homo sapiens -0.09718183395762026 GQETSTNPIASIFAWTR Unmodified 1877.9272 0.92717599 274 V9HW78;B2R5M8;A0A024R3Y6;O75874;Q6FIA4;Q6FI37;Q0QER2;B4DXS4 HEL-216;IDH1 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 3.5 0.5 1 1 64.483 64.504 3 1.3245E-23 20336 20230619_1882_Aki_TMTPro18x_K_F3 203.59 181.76 57660 54681 63192 61834 51073 64291 58089 56311 62757 59911 70683 81124 72771 89463 79888 81410 79329 89600 53412 50100 63545 61911 54244 64641 58349 58210 63967 61038 72342 81668 74727 91451 81091 82412 75978 84978 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139880000 10912 274 10316 20861;20862 16720;16721 16720 2 9606 Homo sapiens 0.023329492043103528 GQEVETSVTYYR Unmodified 1430.6678 0.66777341 1752 A0A8I5KX20;A0A8I5QJ67;A0A8I5KSY3;D6RFH4;A0A8I5KP74;H3BUX2;A0A8I5QKN7;A0A8I5KYK4;J3QR91;A0A8I5KSY8;O43169;Q5HYD9 CYB5B;DKFZp686M0619 Cytochrome b5 type B yes no 0 0 0 3.5 0.5 1 1 43.447 43.504 2 6.8842E-18 11043 20230619_1883_Aki_TMTPro18x_K_F4 251.81 207.49 355720 260230 275160 333260 236850 312100 281030 275010 365390 363860 399440 440680 484100 403680 323000 540800 489260 474890 328090 238950 286020 330170 251010 316250 283500 286080 368870 365410 411980 442800 483840 424730 341660 536900 466410 451810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 535870000 10913 1752 10317 20863;20864 16722;16723 16723 2 9606 Homo sapiens -0.030333766867897793 GQFAEHLLGAGFVSSR Unmodified 1674.8478 0.84780346 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5;E7EWK3;A0A0G2JRP3;A0A0G2JQU7 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 0 0 3 0 1 55.482 55.523 3 9.225499999999999E-26 16570 20230619_1882_Aki_TMTPro18x_K_F3 226.79 208.78 108780 83622 104520 108450 90523 107250 110480 108520 123260 113760 116770 110150 121860 118800 106170 137040 128020 141900 100520 76779 106350 107470 95742 108540 110660 110940 124570 114620 120290 112360 123600 123180 109620 137600 122370 134680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 496160000 10914 4503 10318 20865 16724 16724 1 9606 Homo sapiens 0.03737347040828354 GQFSTDELVAEVEK Unmodified 1550.7464 0.74641766 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;A0A087WX41;P53675-2;P53675 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 0 3.5 0.5 1 1 60.699 60.714 2 2.5323E-06 18603 20230619_1883_Aki_TMTPro18x_K_F4 131.13 106.79 18617 10563 12081 16989 12077 16795 15450 14594 17672 24105 20809 25692 25309 22944 16342 32664 30076 32171 17132 9736.7 12850 16608 12682 16933 15449 15323 18039 23893 21421 25910 25288 24264 17625 32587 28658 30554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30911000 10915 826 10319 20866;20867 16725 16725 1 9606 Homo sapiens -0.006925691724063654 GQFSTDELVAEVEKR Unmodified 1706.8475 0.84752869 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;A0A087WX41;P53675-2;P53675 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 1 4 0.816 1 1 1 56.327 56.363 3 2.4165E-20 16814 20230619_1883_Aki_TMTPro18x_K_F4 218.21 201.32 984470 981890 1071600 1219500 955650 1007100 1396200 1190000 953260 1186100 1197400 625310 981060 638750 1347900 634640 563360 497610 912220 900310 1080700 1209400 1011500 1038900 1368400 1203600 1006400 1181000 1204900 661840 1022900 659550 1317000 632690 546150 474330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1103500000 10916 826 10320 20868;20869;20870 16726;16727;16728 16727 3 9606 Homo sapiens 0.022378825302894256 GQGCTAYDVAVNSDFYR Unmodified 1921.8265 0.82647567 37 M0QYF4;M0QYA2;A0A024QZE9;Q9NWS0;M0R028;M0QZM3;M0R3A4 PIH1D1;FLJ20643 PIH1 domain-containing protein 1 yes no 0 0 0 5.5 0.5 1 1 53.365 53.44 3 0.00015672 15235 20230619_1885_Aki_TMTPro18x_K_F5 87.496 83.325 30859 27775 33004 33795 32983 37166 32725 35136 39326 36543 40006 38475 44069 33441 41065 35292 38674 37888 28569 25471 33350 33683 34263 37281 33235 36068 39717 36920 41183 38800 44669 34783 41645 35605 37021 35961 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41016000 10917 37 10321 20871;20872 16729 16729 1 9606 Homo sapiens -0.09756450840859543 GQGHQYELNSK Unmodified 1259.5895 0.58946351 1122 A0A0S2Z5B2;O00257;A0A0S2Z4Q9;O00257-3 CBX4 E3 SUMO-protein ligase CBX4 yes no 0 0 0 5.5 0.5 1 1 34.843 34.896 3 0.011823 7604 20230619_1886_Aki_TMTPro18x_K_F6 66.498 51.296 14739 10999 13953 15077 14650 14245 18368 19409 13250 14532 19381 18122 15864 13646 17904 17313 20659 19850 13615 10107 14258 14884 15231 14586 18155 19339 14025 15039 19443 18097 16400 14418 18319 17482 19734 18830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6719500 10918 1122 10322 20873;20874 16730;16731 16731 2 9606 Homo sapiens -0.029947644813773877 GQGSVSASVTEGQQNEQ Unmodified 1704.7551 0.75508487 3660 P55735-2;P55735;P55735-4;P55735-3;Q53GB2 SEC13 Protein SEC13 homolog yes no 0 0 0 1.5 0.5 1 1 38.902 38.935 2 4.7435E-19 9626 20230619_1880_Aki_TMTPro18x_K_F1 193.23 173.99 5648.2 3576.2 5270 6154.4 9979.8 10413 5534.7 6225.8 9193.8 7314 10413 9814.7 9388.9 10348 9000.8 7251.8 13168 10918 5212.4 3297.7 5458.3 6049.1 9879.1 10108 5953.4 6675.9 9201.8 7421.4 10575 9867.3 9616.4 10486 9377.9 7550.2 12544 10339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38276000 10919 3660 10323 20875;20876 16732 16732 1 9606 Homo sapiens -0.06910247273799541 GQGVYLGMPGCLPVYDALAGEFIR Oxidation (M) 2598.2611 0.26106543 3526 V9HW71;P30040;F8VY02 HEL-S-107;ERP29 Endoplasmic reticulum resident protein 29 yes no 0 1 0 1.5 0.5 1 1 65.033 65.037 3 9.4443E-05 20827 20230619_1881_Aki_TMTPro18x_K_F2 72.532 59.683 28837 29114 35205 27356 24339 26387 27674 27812 35125 13856 13660 16076 18972 12861 19865 22924 21742 20182 26753 26629 35016 27804 26221 26811 27953 27953 34441 14855 15284 16137 19231 13914 20304 22708 20774 19204 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19977000 10920 3526 10324 20877;20878 16733 16733 2189 1 9606 Homo sapiens 0.025865338003768557 GQGYVGGQR Unmodified 920.44643 0.44642809 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 6 0 1 29.738 29.769 2 0.050461 5702 20230619_1886_Aki_TMTPro18x_K_F6 67.169 25.74 8190.3 4582.1 8726.2 10068 13874 14628 10845 10607 12890 7845.7 12175 10746 9739.9 9356.7 11270 5021.8 11726 9599.1 7562.5 4244.2 8904.4 9760.4 13918 14343 11172 11042 12966 8178.9 12412 10728 10097 9468.7 11421 5395.3 11200 9076.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4133800 10921 3957 10325 20879 16734 16734 1 9606 Homo sapiens -0.016977270819438672 GQHEPSKPPPAGETVTGGFGAK Unmodified 2148.06 0.05998108 4520 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 yes yes 0 0 1 7 0 1 41.546 41.617 4 0.00015042 9828 20230619_1887_Aki_TMTPro18x_K_F7 75.358 65.7 20684 8472.1 16659 16781 19093 17797 19632 19087 17835 20983 22938 19192 24582 17228 20173 26579 19411 21029 19036 7849.4 17291 16268 19630 17943 19714 19459 18491 21039 23339 19528 24796 18340 20586 26228 18590 20026 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39680000 10922 4520 10326 20880 16735 16735 1 9606 Homo sapiens 0.03187348870324058 GQHPNPLR Unmodified 917.48315 0.48314794 99 A0A024R0L6;Q15102;M0R389;M0R1K3;M0QZT2 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma yes no 0 0 0 6.5 1.12 1 1 1 1 25.761 25.821 3 6.4719E-05 4526 20230619_1888_Aki_TMTPro18x_K_F8 149.4 79.402 446330 215480 407270 430120 517180 531420 478970 478850 616070 487120 568130 592300 520520 497290 525000 405160 665710 577640 411350 199440 418700 417660 527490 528190 489330 493050 617500 495350 583260 592870 533500 511190 540800 418760 634970 547140 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 543150000 10923 99 10327 20881;20882;20883;20884 16736;16737;16738;16739 16739 4 9606 Homo sapiens 0.021105695346022912 GQHSNVDMLVR Oxidation (M) 1270.6088 0.60881874 2917 E9PHT6;Q9NVE7;Q7RTX2;B4DZX1;B4DHW9;H0YA26 PANK4 Pantothenate kinase 4 yes no 0 1 0 5 0 1 32.494 32.576 3 0.0093539 6616 20230619_1885_Aki_TMTPro18x_K_F5 65.348 46.741 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10924 2917 10328 20885 16740 16740 1738 1 9606 Homo sapiens -0.015661314621411293 GQHVPGSPFQFTVGPLGEGGAHK Unmodified 2303.1447 0.14471376 3484;3886 P21333;P21333-2;Q60FE5;Q60FE6;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91;H0Y5C6;Q14315;Q14315-2;Q59H94 FLNA;FLJ00119;FLNC Filamin-A;Filamin-C no no 0 0 0 2 0 1 52.56 52.593 4 6.8681E-63 15630 20230619_1881_Aki_TMTPro18x_K_F2 275.02 227.38 41361 20174 37491 35669 38073 43150 42917 45176 65047 42430 51577 65382 61088 55576 36729 66632 61704 87178 38119 18637 38407 34836 39691 43079 43667 45935 64393 43772 54020 64997 60944 58237 39330 67826 58973 82491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 413370000 10925 3484;3886 10329 20886 16741 16741 1 9606 Homo sapiens 0.04526719406931079 GQICWYQK Unmodified 1081.5015 0.50150012 3449 P14324-2;P14324;A0A087WVN4;A0A087X090;Q14329 FDPS Farnesyl pyrophosphate synthase yes no 0 0 0 2.5 0.5 1 1 50.971 51.029 2 0.017704 14890 20230619_1881_Aki_TMTPro18x_K_F2 91.065 59.693 78990 67352 73770 78400 90103 88562 83914 88076 89430 73033 71670 66598 66899 60830 70115 81151 170720 65667 73020 61749 75629 78420 92055 88809 85149 89592 90069 74439 74147 67764 68770 63976 76800 80331 161640 62920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153470000 10926 3449 10330 20887;20888 16742 16742 1 9606 Homo sapiens -0.03599056605708029 GQIEEAGWSYVGGWTGQGGSK Unmodified 2152.9814 0.98139641 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162;Q7KYX9;A0A0S2Z4A8;F8VP00;P78457 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 7.5 0.5 1 1 61.617 61.651 3 1.204E-22 18471 20230619_1888_Aki_TMTPro18x_K_F8 176.91 168.42 196950 162010 194460 189660 162130 185690 199980 182860 203410 236410 229230 267130 242100 234880 255660 283120 257860 297190 182100 148560 197240 189290 172000 188050 199610 188540 208240 236930 234890 268590 247520 245770 260020 284450 246970 281980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 489130000 10927 116 10331 20889;20890 16743;16744 16744 2 9606 Homo sapiens -0.048975034348131885 GQIGAPMPGK Oxidation (M) 970.4906 0.49060109 332 A0A024R5C5;P11498 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 1 0 8 0 1 40.085 40.074 3 0.0075908 9510 20230619_1888_Aki_TMTPro18x_K_F8 68.657 39.31 116820 113720 135460 130020 154240 108210 195400 184700 151310 166610 201590 179650 160430 131590 166850 133160 237320 122880 108290 104190 136290 129840 159110 113020 193260 182930 158600 169550 202560 180160 165370 137400 173200 133370 225590 117240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31485000 10928 332 10332 20891 16745 16745 197 1 9606 Homo sapiens 0.004175410200332408 GQILMPNIGYGSNK Oxidation (M) 1506.7501 0.75006325 199 D3YTB1;A0A024R2G7;F8W727;P62910 RPL32 60S ribosomal protein L32 yes no 0 1 0 3 0 1 51.574 51.639 3 0.0010524 14871 20230619_1882_Aki_TMTPro18x_K_F3 74.649 56.848 447470 352810 433950 513190 563650 572390 546100 490430 590780 410120 539370 485310 495490 471740 592760 575890 581330 522370 413570 324320 444350 505510 574340 572390 552820 504870 596540 421560 553800 489490 512100 492180 600310 574160 555910 496930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162370000 10929 199 10333 20892 16746 16746 124 1 9606 Homo sapiens 0.01695822120473167 GQILMPNIGYGSNK Unmodified 1490.7551 0.75514863 199 D3YTB1;A0A024R2G7;F8W727;P62910 RPL32 60S ribosomal protein L32 yes no 0 0 0 3.5 0.5 1 1 57.04 57.059 3 9.975E-12 17236 20230619_1882_Aki_TMTPro18x_K_F3 177.12 149.26 258640 211060 244170 269140 231880 330080 278050 266730 314330 286220 248990 239130 355130 274960 240650 375740 329690 356460 239050 193710 249310 267740 243720 327480 278770 277390 315700 286990 263030 246390 353590 287960 252390 374440 314770 338670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 477200000 10930 199 10333 20893;20894 16747;16748 16747 2 9606 Homo sapiens 0.029401259831047355 GQILMPNIGYGSNKK Oxidation (M) 1634.845 0.84502627 199 D3YTB1;A0A024R2G7;F8W727;P62910 RPL32 60S ribosomal protein L32 yes no 0 1 1 4.5 0.5 1 1 48.02 48.078 3 0.033365 12923 20230619_1885_Aki_TMTPro18x_K_F5 71.98 65.543 239190 218970 236240 248680 300110 275790 288110 271870 251420 294560 300820 278890 309200 246580 316550 329540 298690 277680 221320 200660 241200 249130 305760 276950 290090 278640 260470 295880 306660 282910 315480 259810 320840 326910 285810 264370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 511130000 10931 199 10334 20895;20896 16749 16749 124 1 9606 Homo sapiens 0.0529975559165905 GQILMPNIGYGSNKK Unmodified 1618.8501 0.85011165 199 D3YTB1;A0A024R2G7;F8W727;P62910 RPL32 60S ribosomal protein L32 yes no 0 0 1 5 0 1 52.442 52.516 4 1.1277E-07 14810 20230619_1885_Aki_TMTPro18x_K_F5 133.14 114.41 149980 152670 155790 143630 132630 175510 168270 137460 140420 175790 122180 130340 196130 114460 106740 209170 181800 170630 138940 139630 157390 146330 140660 174230 166720 144140 144240 174180 129440 133890 193310 123840 114810 206170 173140 162520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220160000 10932 199 10334 20897 16750 16750 1 9606 Homo sapiens 0.06544059454290618 GQIPEIK Unmodified 783.44905 0.44905385 2835 Q6FH24;D3DWY7;P61758-2;P61758 VBP1 Prefoldin subunit 3 yes no 0 0 0 6.5 0.5 1 1 46.843 46.929 3 0.035046 12113 20230619_1887_Aki_TMTPro18x_K_F7 67.032 19.183 82053 67415 69212 80545 89614 107240 91491 86150 123350 80580 92745 101490 99891 81379 82470 92546 113150 97833 75776 61831 71769 80587 91672 105910 93061 89338 122500 82478 96944 101390 100920 85204 85906 93096 107850 92923 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146100000 10933 2835 10335 20898;20899 16751 16751 1 9606 Homo sapiens 0.0486672832299746 GQIPSSLLLLLPTGSTEN Unmodified 1838.9989 0.99894395 2986 F8W0B5;F8WB05 ATXN2 yes no 0 0 0 2 0 1 67.047 67.054 3 0.0027885 21608 20230619_1881_Aki_TMTPro18x_K_F2 69.605 51.467 2725.9 1584.8 1338.8 1814 2266.1 1364 1260.2 2794.3 3610.5 2511.9 1980.2 2619.6 3058.9 3036 1625.3 2870.8 2865.6 3581 2505.3 1455.2 1489.7 1808.9 2253.8 1449.5 1403.5 2743.2 3480.4 2558.5 2157 2666.9 3024.6 3108.7 1753.4 2923.6 2734.8 3391.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4841000 10934 2986 10336 20900 16752 16752 1 9606 Homo sapiens 0.11300443838194951 GQISETLK Unmodified 874.476 0.47599688 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J4Q0;A0A994J428 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 5.5 0.5 2 2 43.798 43.883 2;3 0.00055815 11160 20230619_1886_Aki_TMTPro18x_K_F6 177.97 98.857 356810 275460 339200 402390 596720 567370 639730 638220 818750 471050 536740 486710 633240 465530 509800 482710 585750 457320 329680 253250 350390 397980 600080 562770 647330 642330 811590 486130 567740 493020 637020 482110 524520 483590 558810 435100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 438240000 10935 43 10337 20901;20902;20903;20904 16753;16754 16754 2 9606 Homo sapiens 0.033737921435204044 GQLCELSCSTDYR Unmodified 1587.6657 0.66574127 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3S6H7G3;A0A3Q8ATF5;Q5U8W9;A0A3Q8APW9;A0A3Q8B022;A0A3Q8APX7;A0A3S6H7Z6;A0A3Q8AIR8;A0A3S6H7Y4;A0A3Q8B027;A0A3S6H765;A0A3Q8BCJ2;A0A3S6H8A6;A0A3Q8BCI7;A0A3S6H824;A0A3S6H950;A0A3S6H942;Q99873-5;A0A3S6H7K8;A0A3Q8AIS2;A0A3Q8APY3;A0A3S6H960;A0A3Q8B4M4;A0A3Q8AIS5;A0A3Q8B9M1;A0A3S6H8W3;A0A3S6H8B5;A0A3S6H7E4;A0A3S6H7X9;A0A3S6H7Y8;A0A3S6H7W7;A0A3Q8B9M7;A0A3Q8AX88;A0A3Q8ATG4;A0A3Q8AIS8;A0A3S6H767;A0A3Q8AM22;A0A3S6H761 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 yes no 0 0 0 4.5 0.5 1 1 46.31 46.37 2 8.6838E-37 12296 20230619_1883_Aki_TMTPro18x_K_F4 290.28 276.37 107590 89154 97813 97129 85399 102810 99445 100810 97823 139300 133690 119880 146070 114040 114200 154930 136350 133840 99416 81696 99987 97563 90134 103510 99483 104130 101370 138050 135900 122450 147100 120030 118140 153730 130230 127350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 468520000 10936 1536 10338 20905;20906 16755;16756 16755 2 9606 Homo sapiens -0.10458496758565161 GQLESIVENIR Unmodified 1256.6725 0.67246486 3469 P17858;P17858-2;Q7L2M7;Q9BSP4;B3KNQ7;Q7Z3R9;Q6MZK4;Q59GI2 PFKL;DKFZp686G1648;DKFZp686L2097 ATP-dependent 6-phosphofructokinase, liver type yes no 0 0 0 6 0 1 57.849 57.918 3 0.0012103 17283 20230619_1886_Aki_TMTPro18x_K_F6 88.803 65.973 76264 64043 73754 75186 71298 87995 78738 79902 88164 84516 83584 91232 85180 74456 85922 86163 82391 82975 70512 58724 75112 75196 74537 87809 79272 82308 89113 85374 86113 91705 86927 77955 87166 86233 78869 78842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46866000 10937 3469 10339 20907 16757 16757 1 9606 Homo sapiens 0.05439552246616586 GQLGDAVSGTDVR Unmodified 1273.6262 0.62624295 2848 Q9UPQ0-10;Q9UPQ0;D6RD46;Q9UPQ0-2;Q9UPQ0-4;G5EA03;E9PDJ9;B7Z2J4;E7EPK0;Q9UPQ0-3;Q9UPQ0-8;Q9UPQ0-5;Q9UPQ0-6;H0Y8P3;Q9UPQ0-9;B7Z5Q8;B7Z3F1;B7Z3G0;B7Z656;B7Z7Z0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes no 0 0 0 3 0 1 41.692 41.755 2 2.1059E-27 10346 20230619_1882_Aki_TMTPro18x_K_F3 246.56 155.91 61297 47287 50459 41641 55561 64425 48404 52104 67365 58764 77593 91694 65685 63688 74956 76031 95099 95298 56577 43269 52175 42871 57210 63164 49840 54244 67909 60045 78715 90606 67935 67236 77173 77277 90797 90310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78340000 10938 2848 10340 20908 16758 16758 1 9606 Homo sapiens 0.0003748734452528879 GQLGHGDTK Unmodified 911.44609 0.44609374 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 4.5 0.5 1 1 30.571 30.643 3 0.00017488 5918 20230619_1885_Aki_TMTPro18x_K_F5 118.4 78.402 41718 21447 78384 74329 168320 116000 87377 158690 68004 33389 86977 113420 43285 66770 106290 25785 99744 82214 38767 20078 77801 71217 164830 115130 92409 155570 71012 42761 86740 109870 48754 68116 106150 30008 95377 77553 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48507000 10939 617 10341 20909;20910 16759;16760 16760 2 9606 Homo sapiens -0.013171468018185806 GQLPDYTSPVVLPYSR Unmodified 1790.9203 0.9202997 4705 Q9Y295;Q9UFA5;H0YI06 DRG1;DKFZp434N1827 Developmentally-regulated GTP-binding protein 1 yes no 0 0 0 1.67 0.471 1 2 59.369 59.378 2;3 1.8937E-07 18375 20230619_1881_Aki_TMTPro18x_K_F2 150.26 135.29 45435 41109 49646 52135 41639 52839 45057 44365 51190 50983 56698 48994 63006 52991 49188 63676 59553 56811 42072 37713 49978 51746 44026 53169 45455 46105 52028 51132 58122 50022 63447 55091 50912 63394 56861 54042 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129610000 10940 4705 10342 20911;20912;20913 16761;16762 16762 2 9606 Homo sapiens 0.0564763632373797 GQLQEAIEHYR Unmodified 1342.663 0.6629628 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;C9JZL3;Q9H5T3;B4DTL6;A0A8V8TNT2;A0A8V8TQJ1 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 0 5 0 1 45.984 46.061 3 0.022593 12098 20230619_1885_Aki_TMTPro18x_K_F5 59.038 48.428 161480 115100 151400 136090 173830 143990 158430 164980 226790 105490 111010 111150 108170 97449 121330 112650 108030 102370 149120 105610 154800 135920 178140 145620 162700 165490 222190 110190 119250 112180 111200 101730 122360 112430 103450 97357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118400000 10941 1842 10343 20914 16763 16763 1 9606 Homo sapiens 0.0053378396107746084 GQLQSHGVQAR Unmodified 1179.6109 0.61086765 1108 A0A0S2Z4W4;Q7Z3D7;P98175-2;P98175;P98175-5;A0A0S2Z4X1;P98175-4;P98175-3;Q6PKH5 DKFZp686E2459;RBM10 RNA-binding protein 10 yes no 0 0 0 7 0.816 1 1 1 26.269 26.322 3 5.7006E-08 4898 20230619_1888_Aki_TMTPro18x_K_F8 169.58 143.96 68237 44342 72471 79851 88443 99176 89250 100180 105890 75597 109290 112100 93125 83270 91604 65387 119780 106600 63048 40910 73561 77916 90641 98763 90481 101590 106900 78850 111280 111130 95534 85918 94573 68398 114240 100860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 119910000 10942 1108 10344 20915;20916;20917 16764;16765;16766 16766 3 9606 Homo sapiens 0.028246653379937925 GQLSFNLRDPELR Unmodified 1543.8107 0.81068967 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004 L1CAM Neural cell adhesion molecule L1 yes no 0 0 1 8 0 1 50.791 50.868 3 3.5316E-06 13908 20230619_1888_Aki_TMTPro18x_K_F8 135.65 106.58 428510 363060 397190 412670 245830 240790 403450 363160 393850 525680 527720 473330 558500 423660 562180 574510 494140 513620 396080 332790 403860 410730 271240 259640 397570 367190 407530 520590 536260 481430 568660 446840 567930 571490 473580 488410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 694740000 10943 2005 10345 20918 16767;16768 16768 2 9606 Homo sapiens 0.06053675495081734 GQLVPLETVLDMLR Unmodified 1582.8753 0.87526376 3375 Q6FGX9;Q53EY8;Q5T9B7;P00568;H0YID2 AK1 Adenylate kinase isoenzyme 1 yes no 0 0 0 2 0 1 67.169 67.176 3 1.3785E-05 21656 20230619_1881_Aki_TMTPro18x_K_F2 115.78 92.104 3640.3 2464.6 4272.4 2159.9 2346.4 3958.8 5589.9 3856 4411.4 3304.8 5376.7 4677.1 3387.8 3313.8 4090.9 4024.7 4940.9 4315.5 3367.3 2256.4 4249.8 2236.9 2680.7 3861.8 5408.8 3934.5 4586 3412.3 5381 4644.2 3557.6 3497.8 4194.1 4049.9 4714.8 4098.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8493700 10944 3375 10346 20919 16769 16769 1 9606 Homo sapiens 0.10714114256848006 GQLVPLETVLDMLR Oxidation (M) 1598.8702 0.87017839 3375 Q6FGX9;Q53EY8;Q5T9B7;P00568;H0YID2 AK1 Adenylate kinase isoenzyme 1 yes no 0 1 0 8 0 1 64.974 64.994 3 0.01938 19936 20230619_1888_Aki_TMTPro18x_K_F8 56.527 40.638 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10945 3375 10346 20920 16770 16770 1982 1 9606 Homo sapiens 0.09469810394239175 GQMEVWDVK Oxidation (M) 1106.5066 0.50664508 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;Q9BY44-2;H7C5R5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 1 0 4 0 1 49.503 49.537 2 0.030472 13778 20230619_1883_Aki_TMTPro18x_K_F4 68.893 33.793 84875 75175 76862 84762 80366 95594 91297 89705 96344 102840 109090 110240 105110 86671 95333 123350 107730 112310 78461 68892 78859 84969 83559 95712 91590 92406 98399 103430 111150 110810 106930 92108 97958 122660 102990 106770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40769000 10946 4468 10347 20921 16771 16771 2782 1 9606 Homo sapiens -0.04234797533740675 GQMQKPFEDASFALR Unmodified 1723.8352 0.83518986 3855 Q13526;K7EN45 PIN1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 yes no 0 0 1 8 0 1 53.877 53.948 3 0.059914 15291 20230619_1888_Aki_TMTPro18x_K_F8 45.14 28.061 102590 104480 124560 102680 84487 96982 123790 116420 107350 115950 137180 97512 97623 86598 140660 82869 80095 83677 95179 95595 123980 103930 91876 99007 122110 117590 111410 116590 137440 99539 102850 89498 138620 83592 77245 79456 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179320000 10947 3855 10348 20922 16772 16772 1 9606 Homo sapiens 0.0022256758632011042 GQNDLMGTAEDFADQFLR Unmodified 2026.9055 0.90545427 3239 Q5T8U5;Q5T8U7;O15260-2;O15260;B7Z605;O15260-3 SURF4 Surfeit locus protein 4 yes no 0 0 0 5.5 0.5 1 1 65.803 65.847 3 0.0040214 20532 20230619_1885_Aki_TMTPro18x_K_F5 68.088 57.989 28632 35605 33878 27361 53008 42792 44007 49431 58928 33246 43466 39113 26332 27265 42654 43821 45575 36093 26601 32501 34211 28578 53188 42324 45344 49563 58469 34673 44565 39097 28247 29347 43253 43334 43512 34398 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127030000 10948 3239 10349 20923;20924 16773 16773 1 9606 Homo sapiens -0.06692223606569314 GQNFHLVVNCFK Unmodified 1461.7187 0.71870354 3315 O75691 UTP20 Small subunit processome component 20 homolog yes yes 0 0 0 4 0 1 51.844 51.871 3 0.0018932 14862 20230619_1883_Aki_TMTPro18x_K_F4 78.692 58.952 104840 76198 97014 101250 86801 95237 108200 99361 90759 142590 152410 159600 168350 139660 101770 165470 167260 193930 96816 69997 99076 100120 91491 96860 107380 102420 96103 142190 154130 160550 168150 146150 108630 167250 159590 183800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69903000 10949 3315 10350 20925 16774 16774 1 9606 Homo sapiens 0.0063129387704066176 GQNLLLTNLQTIQGILER Unmodified 2023.1426 0.1425885 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 4.5 0.5 1 1 66.252 66.279 3 6.9533E-24 20674 20230619_1885_Aki_TMTPro18x_K_F5 203.59 174.79 7751.8 6434 6693 7897.5 7690.9 7965.4 9506.3 8464.5 8430.7 8831.5 8074.1 9323.7 10418 10535 9465.6 9670.6 10296 10701 7160.4 5902.4 6910.5 7856.3 7951.5 8062.8 9442.4 8626.5 8642.4 8921.6 8415.3 9479.5 10525 10776 9688.6 9791.2 9846.2 10152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92985000 10950 3440 10351 20926;20927 16775 16775 1 9606 Homo sapiens 0.17194290669112888 GQNLLQTQDHAK Unmodified 1351.6844 0.68442653 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 6.5 0.5 1 1 38.72 38.793 3 3.1669E-07 9020 20230619_1886_Aki_TMTPro18x_K_F6 158.25 124.66 127480 93595 114280 117880 123300 132790 126550 129040 165280 134130 139610 102280 136950 104240 103110 138320 130930 93874 117700 85926 117340 117260 127520 133070 128600 132190 165080 134400 144020 105520 138200 109280 107160 135880 124750 89769 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 161070000 10951 3588 10352 20928;20929 16776;16777 16776 2 9606 Homo sapiens 0.022651689897884353 GQNPNATFGEVSK Unmodified 1347.6419 0.64189301 2499 B4DJ39;O94842-3;O94842-2;O94842;B4DYA1;G8YXX4;O94900;O15405-2;O15405 TOX4;Bbtx1;TOX;TOX3 TOX high mobility group box family member 4;Thymocyte selection-associated high mobility group box protein TOX;TOX high mobility group box family member 3 yes no 0 0 0 5.5 0.5 1 1 44.786 44.869 3 5.0658E-05 11643 20230619_1886_Aki_TMTPro18x_K_F6 111.88 97.971 177070 143870 165300 179820 174240 182740 177980 163100 187030 202030 215190 204770 224440 176630 192980 193310 191540 170770 163640 132020 169100 178670 180320 184170 179550 169100 191250 202160 219770 206770 227130 184040 196700 192780 183130 162510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 400600000 10952 2499 10353 20930;20931 16778;16779 16779 2 9606 Homo sapiens -0.018022261384203375 GQNVLLTENAEVK Unmodified 1413.7464 0.74635808 1017 E7EN19;Q53TX8;A0A0D9SEY1;B7Z388;O95819-3;O95819-6;G5E948;V9HWH3;O95819-2;B7Z3V5;O95819;O95819-5;H7C360;O95819-4;E7ENQ1;E7EX83;Q9UKE5-3;Q9UKE5-4;Q9UKE5;Q9UKE5-7;Q8N4C8-3;C9J338;Q8N4C8-5;Q9UKE5-5;Q8N4C8-2;Q8N4C8-4;Q9UKE5-6;Q9UKE5-2;Q8N4C8;A0A590UJE1;I3L2I2;Q9UKE5-8 MAP4K4;HEL-S-31;TNIK;MINK1 Mitogen-activated protein kinase kinase kinase kinase 4;TRAF2 and NCK-interacting protein kinase;Misshapen-like kinase 1 yes no 0 0 0 4.5 0.5 1 1 50.099 50.175 3 0.00029699 13820 20230619_1885_Aki_TMTPro18x_K_F5 94.688 69.833 57432 48415 51749 55591 47409 59125 63032 56012 72859 55034 59659 55661 64083 53278 61719 71029 59599 63727 53073 44384 53015 55609 50080 59441 62925 57439 73073 55737 62008 56455 65145 55970 62739 70657 57073 60590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114530000 10953 1017 10354 20932;20933 16780;16781 16781 2 9606 Homo sapiens 0.05603475618249831 GQPAIIDGELYNEVK Unmodified 1644.8359 0.83590137 4703 Q9Y266;Q9H2R7 NUDC;NPD011 Nuclear migration protein nudC yes no 0 0 0 4.33 0.471 2 1 58.054 58.084 2;3 5.511300000000001E-35 17082 20230619_1885_Aki_TMTPro18x_K_F5 225.21 177.17 49856 32679 43690 56817 39270 55180 46520 45583 65401 63461 51124 58337 73555 53246 53770 82273 71795 70408 45996 30133 44919 55308 41479 55641 47062 47729 65039 63048 54136 59289 73385 56660 56175 81452 68509 67004 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 794470000 10954 4703 10355 20934;20935;20936 16782;16783 16783 2 9606 Homo sapiens 0.03927685507005663 GQPDEELKPK Unmodified 1139.5823 0.58225287 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 1 3.67 0.471 1 2 40.528 40.575 3;4 0.006719 9804 20230619_1883_Aki_TMTPro18x_K_F4 79.201 64.995 214110 147510 206420 220710 243220 243940 221890 246980 280260 232860 281330 329400 278080 240030 293880 242980 321580 313180 197730 135720 210920 217110 249070 244950 226870 251710 282100 239040 288840 326770 284710 250710 299780 248240 307360 296750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 596900000 10955 1102 10356 20937;20938;20939 16784;16785 16785 2 9606 Homo sapiens 0.018045029182076178 GQPDVVVK Unmodified 840.47052 0.47051757 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHJ0;A0A5F9ZHD4;A0A5F9ZI66 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 5 0 1 42.215 42.298 2 0.0014198 10483 20230619_1885_Aki_TMTPro18x_K_F5 152.47 85.41 45634 26332 52388 58323 56270 89423 59433 71601 93025 56835 81718 139800 118090 116640 66822 78407 188600 237120 42171 24390 52788 56591 58490 87503 60795 73977 92290 60839 86287 137150 117200 119200 75626 88199 179610 223360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49252000 10956 1208 10357 20940 16786 16786 1 9606 Homo sapiens 0.04390113351723812 GQPDVVVKEDEEYK Unmodified 1633.7835 0.78353145 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHJ0;A0A5F9ZHD4;A0A5F9ZI66 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 1 3 0.816 1 1 1 46.179 46.246 3 4.3122E-05 12707 20230619_1881_Aki_TMTPro18x_K_F2 107.82 99.962 200130 185800 194330 233020 249320 234440 247420 255730 226340 294940 334340 280920 305180 254670 308590 308950 289030 237460 185170 170420 198920 231440 254140 237570 249030 260790 236320 295350 336370 285150 312410 266350 312640 305660 276370 226490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1330100000 10957 1208 10358 20941;20942;20943 16787 16787 1 9606 Homo sapiens -0.008008976265955425 GQPFDVGPR Unmodified 971.48248 0.48247924 3185 Q8NHX0;L7RXH5;P27361-2;P27361;E9PBK7;E9PJF0;E9PQW4;P27361-3 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 0 0 0 6 0 1 43.24 43.333 2 0.00018839 10923 20230619_1886_Aki_TMTPro18x_K_F6 120.87 93.738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10958 3185 10359 20944 16788 16788 1 9606 Homo sapiens -0.004402699050956471 GQPLGPAGVQVSLR Unmodified 1377.7728 0.7728476 1037;1668 A0A0G2JN29;Q15155;A0A7I2V4D7;A0A7I2V686;A0A7I2V2V8;A0A7I2V4T6;A0A7I2V6B0;J3KN36;Q5JPE7-2;P69849;Q5JPE7;A0A7I2V2Z5 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 2;Nodal modulator 3 no no 0 0 0 3 0 1 50.165 50.24 2 3.3045E-05 14227 20230619_1882_Aki_TMTPro18x_K_F3 144.89 93.101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10959 1037;1668 10360 20945 16789 16789 1 9606 Homo sapiens 0.09907209300286013 GQPLPDHLQMAVQGK Unmodified 1617.8297 0.82971055 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A994J4Z2;Q59FZ6;A0A2R8YGP5;A5D6X0 SMARCA4 Transcription activator BRG1 yes no 0 0 0 4.5 3.5 1 1 48.389 48.422 3 7.2002E-14 12832 20230619_1888_Aki_TMTPro18x_K_F8 170.11 135.68 166090 143710 161570 160770 139510 167720 183960 175460 171310 184850 199500 168410 187060 160760 192460 182460 186090 179570 153600 131700 164200 161140 147890 169260 182570 178980 176380 185760 202660 171560 191540 167240 195200 182900 178070 170610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162500000 10960 1348 10361 20946;20947 16790;16791 16791 2 9606 Homo sapiens 0.04550888794460661 GQPLPDHLQMAVQGK Oxidation (M) 1633.8246 0.82462518 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A994J4Z2;Q59FZ6;A0A2R8YGP5;A5D6X0 SMARCA4 Transcription activator BRG1 yes no 0 1 0 8 0 1 45.256 45.284 3 2.2297E-05 11561 20230619_1888_Aki_TMTPro18x_K_F8 97.797 71.068 34922 26350 37341 36400 37934 39350 37495 34226 41466 38064 40849 40246 43586 31191 45515 36388 38393 44806 32294 24212 37728 35967 39318 39452 37962 35439 41994 38337 42070 40443 44436 32790 45806 36982 36848 42444 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128640000 10961 1348 10361 20948 16792 16792 850 1 9606 Homo sapiens 0.03306584931829093 GQPLPPDLLQQAK Unmodified 1403.7773 0.77726428 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 7.5 0.5 1 1 55.441 55.502 3 4.2122E-05 15955 20230619_1888_Aki_TMTPro18x_K_F8 113.69 77.391 236330 245330 280660 272060 250830 283980 266600 281030 307090 295480 292790 312350 324280 269960 283960 346530 345880 377230 219230 224680 280900 272860 263290 286260 269310 287690 310060 298360 302580 314910 328080 284000 293230 348500 330550 357860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 163440000 10962 2980 10362 20949;20950 16793;16794 16794 2 9606 Homo sapiens 0.0915267372317885 GQPSNKEDVDDLVSQLR Unmodified 1898.9334 0.93338358 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 5.5 0.5 1 1 53.152 53.226 3 7.557E-49 15143 20230619_1885_Aki_TMTPro18x_K_F5 288.92 258.38 296510 285380 308180 325970 321910 360870 322040 351490 345340 384820 368040 353970 384300 315540 377590 388720 351330 349430 274560 261490 312390 326400 333290 362110 325620 360500 351730 386080 377230 359480 391240 330650 382700 387260 336390 332310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1177800000 10963 3440 10363 20951;20952 16795 16795 1 9606 Homo sapiens 0.019874226451747745 GQQELLYVVPFVAK Unmodified 1589.8817 0.88172935 1957 A5YKK6;A5YKK6-2;A5YKK6-3;A5YKK6-4;B4DYL7;H3BVC9 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 2 0 1 63.591 63.6 3 4.5157E-05 20232 20230619_1881_Aki_TMTPro18x_K_F2 83.729 68.19 47592 41256 45403 54736 39292 45639 51843 50975 53377 58167 57634 50599 60714 56100 56832 66656 57137 61611 44007 37872 46274 54041 41646 46956 51604 51917 54484 58166 59027 51943 61708 58228 57933 66506 54697 58555 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83975000 10964 1957 10364 20953 16796 16796 1 9606 Homo sapiens 0.1103837547987041 GQQPCTVAEGR Unmodified 1201.551 0.55096951 4354 Q96GP6-2;Q96GP6 SCARF2 Scavenger receptor class F member 2 yes no 0 0 0 3 0 1 31.174 31.259 2 0.00074336 6088 20230619_1882_Aki_TMTPro18x_K_F3 126.19 97.107 12194 7192.1 15585 13043 17551 17498 13753 17506 20251 14176 14519 18272 22104 14638 15324 10250 26298 24725 11282 6639.3 15559 12748 17962 17349 14300 17780 20031 14638 15516 18214 21982 15030 16274 11195 25045 23337 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18143000 10965 4354 10365 20954 16797 16797 1 9606 Homo sapiens -0.04174393387575037 GQQPHQGLWR Unmodified 1205.6054 0.60538834 4257 Q8NHH9-2;Q8NHH9;C9JQQ5;H7C3A2;F8WD17;F8WEN4;F8WBH0;C9JC25 ATL2 Atlastin-2 yes no 0 0 0 1.5 0.5 1 1 33.67 33.699 3 7.8123E-06 7130 20230619_1881_Aki_TMTPro18x_K_F2 132.88 112.74 35632 30461 38482 38370 46982 53956 45875 47948 53303 35745 42827 41610 41442 33342 51502 33269 51636 43295 32979 27949 38987 38302 48113 53225 46547 49057 53403 36988 44391 41700 42811 34685 52093 34055 49346 41046 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103890000 10966 4257 10366 20955;20956 16798 16798 1 9606 Homo sapiens 0.010809865461624213 GQQQEPGRYPSR Unmodified 1401.6749 0.67492447 2814 D3DS96;Q9NRL2-2;Q9NRL2;Q59G54;B3KND8 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 0 0 1 5.5 0.5 1 1 27.119 27.172 3 0.0030762 4703 20230619_1885_Aki_TMTPro18x_K_F5 74.611 58.72 11749 7430.6 10717 9946.4 14628 13234 11049 11592 14616 13546 14050 13709 15523 12782 12215 11969 18008 14011 10841 6830.7 11021 9881.3 14775 13102 11461 12003 14672 13596 14499 13873 15642 13179 12795 12159 17146 13301 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57920000 10967 2814 10367 20957;20958 16799 16799 1 9606 Homo sapiens -0.009845992957252747 GQQQVFK Unmodified 833.43955 0.43955179 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5;A0A2R8YG21 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 4.5 3.5 1 1 40.336 40.332 2 0.0036056 9603 20230619_1888_Aki_TMTPro18x_K_F8 153.88 100.13 500410 268080 602310 652940 1006400 1104700 858930 951260 973180 575290 896930 978750 784410 728020 906220 404440 1031200 883670 462500 248850 609890 632710 1009100 1078200 878010 971850 980240 614390 919780 966070 810460 742290 923310 440220 984370 834770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 491700000 10968 2908 10368 20959;20960 16800;16801 16801 2 9606 Homo sapiens 0.016169600374723814 GQQVIEEQR Unmodified 1085.5465 0.54653606 240 A0A024R3F4;A0A024R3H6;Q86UU1-2;Q86UU1;Q96D60;B0YJ65;Q6ZUD6;Q8NC75;A0A087WZL0;B4DK17;Q96SW0 PHLDB1 Pleckstrin homology-like domain family B member 1 yes no 0 0 0 2 0 1 33.759 33.816 2 0.0011593 7192 20230619_1881_Aki_TMTPro18x_K_F2 129.38 104.46 11188 5166.1 14110 15331 17504 19881 13795 16289 13110 12646 23992 28127 20460 23353 25866 8734.3 22821 23626 10339 4820.4 14148 14681 17806 19652 14125 16794 13810 13445 23990 27654 21278 23456 25942 9909 21870 22279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10549000 10969 240 10369 20961 16802 16802 1 9606 Homo sapiens 0.0071846546118194965 GQQVIEEQRR Unmodified 1241.6476 0.64764709 240 A0A024R3F4;A0A024R3H6;Q86UU1-2;Q86UU1;Q96D60;B0YJ65;Q6ZUD6;Q8NC75;A0A087WZL0;B4DK17;Q96SW0 PHLDB1 Pleckstrin homology-like domain family B member 1 yes no 0 0 1 3.5 0.5 1 1 29.671 29.752 3 0.00047227 5492 20230619_1883_Aki_TMTPro18x_K_F4 96.171 71.88 9597.6 7229.1 10050 7481.1 12922 11708 10449 12993 11741 12000 13696 13131 14579 12695 13175 9417.7 14505 12885 8873.7 6623.9 10195 7601.9 13108 11556 10730 13142 11972 12212 13995 13259 14785 12941 13473 9726.1 13855 12207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9088600 10970 240 10370 20962;20963 16803 16803 1 9606 Homo sapiens 0.03648917163877741 GQRPDFTDAIILR Unmodified 1500.8049 0.80487601 2169 A8MZF9;P55039;Q59FW9 DRG2 Developmentally-regulated GTP-binding protein 2 yes no 0 0 1 8 0 1 51.3 51.377 3 0.0025016 14179 20230619_1888_Aki_TMTPro18x_K_F8 68.856 56.88 71299 58719 57853 68763 61587 80334 75109 70647 68744 66293 56851 64991 70012 51325 69343 60099 69449 68513 65828 53844 60033 68760 64139 80107 74731 72741 69956 67186 59553 65525 70953 53916 70474 60755 66440 64989 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68782000 10971 2169 10371 20964 16804 16804 1 9606 Homo sapiens 0.07450576983410429 GQSDIAITK Unmodified 931.49746 0.4974606 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57;A4FS09 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 5.5 0.5 1 1 43.53 43.617 2 0.00014742 11062 20230619_1885_Aki_TMTPro18x_K_F5 163.38 110.7 218860 101810 230640 253510 224100 310470 224680 250420 278530 245580 360080 376530 322780 289620 272520 173040 370600 346960 201920 94630 233410 243920 233870 307760 228390 259870 283630 252490 363980 373010 328330 295560 282820 185880 353480 327790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 231040000 10972 471 10372 20965;20966 16805;16806 16805 2 9606 Homo sapiens 0.028971771722126505 GQSEDPGSLLSLFR Unmodified 1504.7522 0.75217174 1704 P08195-4;P08195-5;P08195;P08195-3;A0A7P0Z4P5;A0A7P0TAN7;A0A7P0Z4A0;A0A7P0T9F7;F5GZS6;P08195-2;A0A7P0TBF8;B4E2Z3;F5H056;F5GZI0 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 0 7 0 1 63.437 63.469 3 2.1081E-13 19406 20230619_1887_Aki_TMTPro18x_K_F7 150.81 133.74 154670 126330 131190 143230 105890 146400 145750 133820 135420 163980 165190 173040 176490 146680 187280 216970 165460 201330 142840 115810 134950 143320 113300 147480 144370 138450 139840 164320 168710 174430 180220 155880 189230 215930 158770 191260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 426420000 10973 1704 10373 20967 16807 16807 1 9606 Homo sapiens 0.019985741299478832 GQSEEIQK Unmodified 917.44543 0.44542503 1864 C9JXB8;A0A994J4A5;C9JNW5;V9HW01;P83731 RPL24;HEL-S-310 60S ribosomal protein L24 yes no 0 0 0 2 0 1 36.687 36.746 2 0.00072991 8383 20230619_1881_Aki_TMTPro18x_K_F2 133.57 70.094 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10974 1864 10374 20968 16808 16808 1 9606 Homo sapiens -0.016599862415318967 GQSGIIYCFSQK Unmodified 1386.6602 0.66018561 635 A0A024RAV2;P46063 RECQL ATP-dependent DNA helicase Q1 yes no 0 0 0 3 0 1 54.682 54.729 3 0.00017424 16241 20230619_1882_Aki_TMTPro18x_K_F3 101.33 78.448 111240 90844 104390 115160 116960 140790 137700 125940 176110 78562 67166 71472 78282 63225 82043 88328 79174 82178 102800 83371 106900 114620 121210 140030 138690 128450 172600 81931 74585 72653 79758 66834 83238 87993 75802 78107 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 366990000 10975 635 10375 20969 16809 16809 1 9606 Homo sapiens -0.01767807488113249 GQSHWVK Unmodified 840.42424 0.42423608 3165 K7ELV2;Q96EE3;Q96EE3-1;K7EP88 SEH1L Nucleoporin SEH1 yes no 0 0 0 1 0 1 35.35 35.35 3 0.014581 8120 20230619_1880_Aki_TMTPro18x_K_F1 84.498 48.302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10976 3165 10376 20970 16810 16810 1 9606 Homo sapiens -0.0023590675972400277 GQSPAGDGSPEPPTPR Unmodified 1548.7168 0.71684887 2472 B4DF80;Q9H6R4-4;Q9H6R4;A0A0A0MRW6;Q9H6R4-2;Q9H6R4-3 NOL6 Nucleolar protein 6 yes no 0 0 0 2.5 0.5 2 2 35.77 35.827 2;3 3.0919999999999996E-19 7888 20230619_1882_Aki_TMTPro18x_K_F3 199.65 187.07 41162 28468 37821 41661 45466 51233 44884 49073 53447 40389 51203 49496 54649 43051 49079 44721 55548 42858 37999 26186 38838 41097 46633 51007 45563 50037 53826 41582 52777 49635 55381 44713 50330 44835 52997 40773 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 94459000 10977 2472 10377 20971;20972;20973;20974 16811;16812;16813 16813 3 9606 Homo sapiens -0.035560883978632774 GQSSWGTGESFR Unmodified 1297.5687 0.56872807 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 0 0 5.5 0.5 1 1 43.287 43.374 2 8.1597E-14 10949 20230619_1885_Aki_TMTPro18x_K_F5 217.45 195.6 164550 138540 174080 171780 158760 185710 201130 215680 218390 223830 217320 203730 224500 197770 208600 200340 229000 228940 152250 127100 175840 171010 167290 187380 200940 218390 221520 225110 223260 207510 228190 204390 213480 202930 218910 217150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 456840000 10978 1473 10378 20975;20976 16814;16815 16814 2 9606 Homo sapiens -0.06815354861055312 GQTHTLEDFQR Unmodified 1330.6266 0.6265773 1085 A0A0S2Z410;Q99714;A0A804HHW5;Q99714-2;Q5H928;A0A0S2Z434 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 3.5 0.5 1 1 36.416 36.466 3 1.1064E-13 8174 20230619_1882_Aki_TMTPro18x_K_F3 191.33 161.52 278650 210610 232490 295610 360580 371290 351930 329810 453960 339420 352100 315050 386820 308020 304570 372430 370680 370210 257180 193560 242340 292330 364230 368730 358190 340050 452370 342110 367210 320930 389740 321510 315170 372900 354020 351650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1026499999.9999999 10979 1085 10379 20977;20978 16816;16817 16816 2 9606 Homo sapiens -0.025510929356414636 GQTLNVNR Unmodified 900.47773 0.47772821 3961 Q2NL82;I3L1Q5 TSR1 Pre-rRNA-processing protein TSR1 homolog yes no 0 0 0 7 0 1 32.98 33.067 2 0.036821 6564 20230619_1887_Aki_TMTPro18x_K_F7 69.954 34.854 17967 9310.5 16072 18387 28372 32743 24702 27623 28604 8180.9 10581 11165 9344.6 10398 16605 7873.5 10065 8594 16561 8612.3 16688 17987 28418 31871 25223 28034 28136 9439.3 11672 11186 9940.7 10604 16347 8025.4 9683.6 8160.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5691000 10980 3961 10380 20979 16818 16818 1 9606 Homo sapiens 0.023508459521394798 GQTLTLTQQQR Unmodified 1272.6786 0.67861287 2649 H0Y9V7;B4E295;B4E2Q0;P98194-2;P98194-4;P98194;P98194-3;P98194-5;P98194-8;P98194-9;P98194-6;P98194-7;H0Y8X9;Q59G44;H0Y9S7 ATP2C1 Calcium-transporting ATPase;Calcium-transporting ATPase type 2C member 1 yes no 0 0 0 4.5 3.5 1 1 39.191 39.184 2 3.246E-17 9714 20230619_1880_Aki_TMTPro18x_K_F1 238.51 197.32 69005 53982 60956 63484 72200 69447 70736 70858 88169 54983 68883 60759 61792 53125 75149 68887 77024 59670 63728 49512 62760 63429 74030 69837 71933 71873 87937 56654 71245 61242 63946 55861 76244 68483 73558 56836 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61419000 10981 2649 10381 20980;20981 16819;16820 16819 2 9606 Homo sapiens 0.053180704781198074 GQTLVVQFTVK Unmodified 1218.6972 0.69722304 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;B4DHR1 CALR;HEL-S-99n Calreticulin yes no 0 0 0 5 0 1 58.11 58.166 2 0.0053809 17143 20230619_1885_Aki_TMTPro18x_K_F5 87.298 72.216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10982 1691 10382 20982 16821 16821 1 9606 Homo sapiens 0.09662232119967484 GQTQEEEVRPK Unmodified 1299.6419 0.64189301 170 B4DKR6;A0A024R1X0;O15234;J3KSY7 CASC3 Protein CASC3 yes no 0 0 1 2.5 0.5 1 1 32.696 32.762 3 0.0017919 6686 20230619_1882_Aki_TMTPro18x_K_F3 87.719 74.739 21037 12556 24889 24410 30094 36485 24867 32607 30799 21877 30507 35210 29648 27193 28303 18221 35010 31879 19449 11602 25039 23815 30733 35851 25587 33266 30996 23098 31308 34839 30240 27842 29114 19257 33411 30146 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23692000 10983 170 10383 20983;20984 16822 16822 1 9606 Homo sapiens 0.004057738615529161 GQVCLPVISAENWK Unmodified 1599.8079 0.80791248 3099 I1SRC5;A0A8Q3WL22;A8K4W8;A0A024R1A4;P68036;P68036-3;A0A1B0GUS4;P68036-2 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 0 0 1.5 0.5 1 1 61.887 61.892 3 8.979E-12 19447 20230619_1881_Aki_TMTPro18x_K_F2 178.84 155.92 209230 173310 165280 206630 153790 221100 198380 224850 259640 264600 226640 291190 370880 326370 199670 493310 454910 573070 193150 158950 171700 206100 162470 222450 199360 230440 259990 266170 240630 295890 366250 344450 221800 496430 433610 543020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 498070000 10984 3099 10384 20985;20986 16823 16823 1 9606 Homo sapiens 0.03200084045897711 GQVCLPVISAENWKPATK Unmodified 1997.0404 0.040431612 3099 I1SRC5;A0A8Q3WL22;A8K4W8;A0A024R1A4;P68036;P68036-3;A0A1B0GUS4;P68036-2 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 0 1 3 0 1 59.189 59.219 4 5.3334E-06 18072 20230619_1882_Aki_TMTPro18x_K_F3 98.391 83.301 36875 36965 41763 34957 36598 45737 40529 40163 44433 50628 44936 38357 48069 40684 49006 45581 44121 37752 34183 33811 41904 35650 38558 45317 40778 41676 45113 50234 46186 39583 48994 42151 49525 45310 42218 35963 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79356000 10985 3099 10385 20987 16824 16824 1 9606 Homo sapiens 0.08179301325822053 GQVEVFALR Unmodified 1017.5607 0.56072956 2321 Q8TCJ8;Q8NCK5;B2RDP6;Q9BQ67;M0QX71 DKFZp564C172;GRWD1 Glutamate-rich WD repeat-containing protein 1 yes no 0 0 0 7.5 0.5 1 1 51.65 51.726 2 0.009608 14384 20230619_1887_Aki_TMTPro18x_K_F7 85.862 64.915 189230 177370 175720 197230 183520 211590 216440 214100 259220 213690 220980 195560 227070 183660 212700 236330 214570 219100 175030 162490 179900 197800 191040 212960 217600 218530 259990 215530 228630 199120 230810 192670 216770 235610 205310 208270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 201330000 10986 2321 10386 20988;20989 16825 16825 1 9606 Homo sapiens 0.05265162680143476 GQVEYLLK Unmodified 948.52803 0.52803245 3587 V9HWG0;P45973;Q6I9T7;F8VNY3 HEL25;CBX5 Chromobox protein homolog 5 yes no 0 0 0 7.5 0.5 1 1 53.735 53.803 2 0.0025947 15203 20230619_1887_Aki_TMTPro18x_K_F7 124.23 40.966 238060 198480 210520 213550 200190 245280 215800 211400 243170 232370 244830 205360 253450 197110 252850 241600 239430 223330 219950 181860 216020 214920 209470 244870 217600 218880 246250 232970 251270 209590 258210 206050 256320 241110 229100 212380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 403510000 10987 3587 10387 20990;20991 16826;16827 16826 2 9606 Homo sapiens 0.05170955557287016 GQVPMQDPR Unmodified 1026.4917 0.49166372 2592 B4DUD5;P33240-2;P33240;E9PID8 CSTF2 Cleavage stimulation factor subunit 2 yes no 0 0 0 4 0 1 36.283 36.329 2 0.02623 8061 20230619_1883_Aki_TMTPro18x_K_F4 74.255 40.177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10988 2592 10388 20992 16828 16828 1 9606 Homo sapiens -0.020522446110817327 GQVPPLVTTNFLVK Unmodified 1511.8712 0.87116466 49 G5EA31;A0A024QZM6;P53992;B4DSN3 SEC24C Protein transport protein Sec24C yes no 0 0 0 4.5 0.5 1 1 62.369 62.395 3 1.5082E-08 19344 20230619_1883_Aki_TMTPro18x_K_F4 146.59 121.73 53125 44205 48847 55026 45826 59271 60737 57291 59737 54609 54201 55882 59701 46810 63264 60637 57261 61764 49095 40558 49987 54733 48300 59542 60336 58610 60684 55374 56152 56374 60894 49338 63924 60784 54876 58635 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143800000 10989 49 10389 20993;20994 16829 16829 1 9606 Homo sapiens 0.13570392825454292 GQVQEVGWHDVAGWLGR Unmodified 1892.9282 0.92817905 3469 P17858;P17858-2;Q7L2M7;Q9BSP4;B3KNQ7;Q7Z3R9;Q6MZK4;Q59GI2 PFKL;DKFZp686G1648;DKFZp686L2097 ATP-dependent 6-phosphofructokinase, liver type yes no 0 0 0 8 0 1 59.663 59.7 3 1.1205E-18 17663 20230619_1888_Aki_TMTPro18x_K_F8 185.33 173.63 65670 55278 60441 73365 63280 75997 68058 65609 84063 74374 73361 88626 86068 77221 76259 87364 88053 108800 60694 50749 61960 72603 65718 76389 68832 68014 84307 75162 76432 88891 87017 80578 78436 88790 84278 103040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50820000 10990 3469 10390 20995 16830 16830 1 9606 Homo sapiens 0.01743208363859594 GQVSEGGQLR Unmodified 1029.5203 0.52032131 4378 Q96L92-3;Q96L92;A0A2R8Y871 SNX27 Sorting nexin-27 yes no 0 0 0 3.5 0.5 1 1 32.436 32.501 2 0.010366 6577 20230619_1882_Aki_TMTPro18x_K_F3 87.123 69.088 50171 25415 60475 60926 75235 91368 67600 77325 73315 57521 91697 109490 89756 79488 85729 37446 110940 102790 46360 23592 60812 58931 76813 89650 68829 79415 75006 60782 93257 107630 91503 80810 88351 42132 105850 96972 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45972000 10991 4378 10391 20996;20997 16831 16831 1 9606 Homo sapiens 0.0067419628969673795 GQVTALVSLK Unmodified 1014.6073 0.6073454 4645 Q9P287-2 BCCIP BRCA2 and CDKN1A-interacting protein yes yes 0 0 0 3 0 1 55.483 55.524 3 0.076704 16521 20230619_1882_Aki_TMTPro18x_K_F3 40.154 31.2 46922 36965 44878 49301 48746 50138 47470 48995 60581 47430 50741 46696 53182 39359 52593 45692 48801 41187 43362 33947 45835 48778 50289 50614 48348 50095 60550 48020 52608 47201 54128 41198 53238 45593 46676 39196 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36072000 10992 4645 10392 20998 16832 16832 1 9606 Homo sapiens 0.10062602511425212 GQVYILGR Unmodified 904.51305 0.51305109 3376 Q5T6L4;P00966;A8KAP9;B4E395 ASS;ASS1 Argininosuccinate synthase yes no 0 0 0 2.5 0.5 1 1 46.842 46.919 2 0.029833 12602 20230619_1882_Aki_TMTPro18x_K_F3 80.229 49.617 182070 143250 166550 315280 404180 447730 369900 358100 444020 243310 228490 301570 300920 197960 272840 308430 295120 326570 168200 132480 175070 305290 400210 440220 376690 368980 439150 254190 248290 299940 303240 213710 279370 309030 282370 309870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 328430000 10993 3376 10393 20999;21000 16833 16833 1 9606 Homo sapiens 0.05697508479943281 GQVYTCGHGPGGR Unmodified 1344.5993 0.59931669 2711 D6R9F4;E9PDR5;B7ZLD4;E7EPI0;B7ZLE0;Q9P2D0-2;Q9P2D0 IBTK Inhibitor of Bruton tyrosine kinase yes no 0 0 0 7 0 1 29.151 29.258 3 0.0029462 5152 20230619_1887_Aki_TMTPro18x_K_F7 71.933 59.957 4893.1 4514.2 5875 5733.3 7410.9 10889 9777.3 8585 7066.1 6647 7229.1 8316.1 7397.2 4178.2 9355.2 6369.1 8209.2 6315.4 4535.6 4141.1 5915.9 5755.3 7648.7 10557 9631.6 8876.4 7356.7 6868.8 7432.2 8222.1 7621.6 4569.9 9397.6 6371.9 7852.4 6005.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1686400 10994 2711 10394 21001 16834 16834 1 9606 Homo sapiens -0.059198997476642035 GQWGTVCDNLWDLTDASVVCR Unmodified 2451.0947 0.094728381 1081 A0A0S2Z3Y1;Q08380;B4DVE1;B4DI70;K7ESM3;K7EKQ5;K7EP36;K7ERZ6;K7EJD3;K7ES75;K7EN99 LGALS3BP Galectin-3-binding protein yes no 0 0 0 7 0 1 64.144 64.174 3 4.9996E-08 19745 20230619_1887_Aki_TMTPro18x_K_F7 106.39 92.656 54650 66282 62118 72736 59688 63771 70307 53938 72137 55888 54845 52724 57244 45867 69273 52666 68546 45990 50743 60670 62511 72810 62422 64983 70292 55927 72655 56328 57219 53433 58911 47904 70085 52507 65435 43835 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113640000 10995 1081 10395 21002 16835 16835 1 9606 Homo sapiens -0.07277519375566044 GQYFGELALVTNKPR Unmodified 1691.8995 0.89950468 424;216 A0A0S2Z472;A8KAH7;A0A024R2W3;P13861-2;P13861;H7C330;O60380;B3KY43;Q6DHZ2;A0A024R712;P31323 PRKAR2A;WUGSC:H_RG363E19.2;PRKAR2B cAMP-dependent protein kinase type II-alpha regulatory subunit;cAMP-dependent protein kinase type II-beta regulatory subunit no no 0 0 1 3.5 0.5 1 1 56.732 56.753 3 2.8364E-42 16949 20230619_1883_Aki_TMTPro18x_K_F4 282.73 243.95 91485 70834 80337 86286 85463 101920 99884 88205 94109 107160 108570 108030 110320 91949 124620 107840 102310 106240 84480 64994 82668 86068 88804 101540 99686 91594 96843 107290 110850 109070 113160 96227 125150 108090 98130 100910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 581630000 10996 216;424 10396 21003;21004 16836 16836 1 9606 Homo sapiens 0.0812309073473898 GQYISPFHDIPIYADK Unmodified 1862.9203 0.9202997 3922 Q15181;V9HWB5;Q5SQT6 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 0 0 5.67 2.62 1 1 1 58.965 59 3 1.0509E-05 18235 20230619_1881_Aki_TMTPro18x_K_F2 102.08 85.591 110100 91520 122110 126530 104280 118430 110410 113330 86722 141110 117810 138360 144660 114170 115920 141670 146960 165770 101910 84064 122790 124780 109810 120240 110360 116910 91246 140900 120740 139650 145380 120120 120240 143180 140440 157130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143990000 10997 3922 10397 21005;21006;21007 16837;16838 16837 2 9606 Homo sapiens 0.023356363237780897 GQYNTYPIK Unmodified 1082.5397 0.53965977 1833 P61619;A0A8V8TMZ5;B4DR61;B3KNF6;C9JXC6;A0A8V8TMZ3;P61619-3 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 yes no 0 0 0 1 0 1 45.918 45.918 2 0.0033353 12685 20230619_1880_Aki_TMTPro18x_K_F1 109.71 79.73 52075 42101 48991 56439 57437 90179 72291 69198 113110 34118 37514 29586 23810 20853 44479 23008 22386 18358 48126 38662 50247 56219 59684 88042 73183 71191 109600 36402 41418 29981 25736 21905 43528 22904 21605 17501 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34920000 10998 1833 10398 21008 16839 16839 1 9606 Homo sapiens 0.0016915258058816107 GQYQDHAIDR Unmodified 1201.5476 0.54759869 3876 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 0 2.5 0.5 1 1 29.725 29.807 3 3.6615E-10 5634 20230619_1881_Aki_TMTPro18x_K_F2 196.88 152.46 12424 7883 8819.9 11059 12869 15557 14554 13451 21017 13312 14508 15854 17473 13574 13977 13215 17709 16070 11445 7250.3 9338.6 10959 13124 15333 14758 13884 20761 13558 15326 15894 17570 14067 14474 13450 16896 15239 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37522000 10999 3876 10399 21009;21010 16840 16840 1 9606 Homo sapiens -0.04511320169922328 GRADTGLETSTR Unmodified 1262.6215 0.62149192 229 A0A024R395;P49959;P49959-3 MRE11A Double-strand break repair protein MRE11A yes no 0 0 1 3.5 0.5 1 1 28.398 28.49 3 0.0001774 5016 20230619_1883_Aki_TMTPro18x_K_F4 100.22 72.741 13670 10978 12587 11343 16129 17627 15827 15772 15846 13105 18328 15713 17054 13117 13483 12536 20416 16479 12630 10057 12923 11516 16463 17308 15978 16164 16225 13471 18609 15754 17272 13597 14148 12832 19440 15625 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47502000 11000 229 10400 21011;21012 16841;16842 16842 2 9606 Homo sapiens 0.0006860320174837398 GRCDEQASGLTSLDLTTSSEK Unmodified 2254.0383 0.038318939 1304 Q15477;A0A8V8TLC0;A0A1U9X8J0;A0A1U9X8J1;A0A1U9X8J2;A0A1U9X8J6;Q96BC0;O76046;Q9NPK3;A0A8V8TL97;H7C4L3;H7C5N0;A0A8V8TLA2;B4E0N1;B4DM01;A0A8V8TN04;A0A1U9X8I7;A0A1U9X8I9;B4DSY1;Q59F56;A0A024RCU1;A0A8V8TLR3 SKIV2L;SKI2W Helicase SKI2W yes no 0 0 1 4 0 1 48.626 48.664 3 1.317E-13 13355 20230619_1883_Aki_TMTPro18x_K_F4 146.78 137.25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11001 1304 10401 21013 16843 16843 1 9606 Homo sapiens -0.0385386873117568 GRCETSASELER Unmodified 1393.6256 0.62559102 2816 H3BTQ3;D3DSM6;P41440-3;P41440-2;P41440 SLC19A1 Folate transporter 1 yes no 0 0 1 1.5 0.5 1 1 29.579 29.615 3 0.0065475 5548 20230619_1881_Aki_TMTPro18x_K_F2 85.554 59.04 10480 9885.4 13474 9770.4 9721.1 9750.4 10181 11665 12874 13764 11135 12346 13254 10937 11923 14602 16590 14069 9722.7 9047 13355 9894.6 10395 9915 10336 11834 12908 13751 11607 12546 13402 11525 12418 14577 15811 13378 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13516000 11002 2816 10402 21014;21015 16844 16844 1 9606 Homo sapiens -0.05547675366869953 GRDDCGTFEDTGPLLQFDYK Unmodified 2333.027 0.027025972 3896 Q14684;Q14684-2;Q6PJM8 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 1 5 1.58 1 1 1 1 60.194 60.229 3 3.0484E-16 18412 20230619_1883_Aki_TMTPro18x_K_F4 161.35 144.2 205150 168160 196120 183980 172620 214970 199080 184720 246320 130480 113420 98643 133230 102100 141880 150310 125670 122110 189630 154110 199570 184990 182160 214320 200590 189400 242630 134080 123440 101880 135740 107800 143270 148670 120380 116300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 251630000 11003 3896 10403 21016;21017;21018;21019 16845;16846;16847;16848 16847 4 9606 Homo sapiens -0.08616646034715814 GRDDITVHDNIK Unmodified 1381.695 0.69499121 4073 Q5VSG8-3;Q5VSG8;E9PMU5;B4DW72 MANEAL Glycoprotein endo-alpha-1,2-mannosidase-like protein yes no 0 0 1 4 0 1 36.753 36.799 4 0.00039479 8245 20230619_1883_Aki_TMTPro18x_K_F4 102.87 69.926 46544 30105 43200 45266 27358 32548 38000 40368 48123 52130 68642 77547 67737 57607 58279 59852 82546 79120 42956 27709 43933 44299 30000 34042 38059 41044 49246 52798 69466 76852 68726 60208 60771 61185 78721 74956 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33539000 11004 4073 10404 21020 16849 16849 1 9606 Homo sapiens 0.019411516442460197 GRDIVVLGVEK Unmodified 1183.6925 0.69247202 1051 Q05DH1;A0A0K0K1K4;O14818;H0UI83;O14818-4 PSMA7;hCG_41772 Proteasome subunit alpha type;Proteasome subunit alpha type-7 yes no 0 0 1 7.5 0.5 1 1 48.278 48.354 3 0.0030302 12890 20230619_1888_Aki_TMTPro18x_K_F8 63.292 25.271 198100 137140 168930 182420 162900 208650 183710 200010 371760 169020 178450 170530 184780 160110 188610 231200 202870 176710 182780 126010 174040 180820 170950 208680 189680 204060 359650 173020 192360 172920 188720 169150 192740 228030 193780 168510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 644690000 11005 1051 10405 21021;21022 16850;16851 16851 2 9606 Homo sapiens 0.10797347977245408 GRDLETMR Unmodified 976.47601 0.47601366 3093 H7C4F6;O00629;A0A7I2YQ95;A0A7I2V340;A0A7I2V333 KPNA4 Importin subunit alpha-3 yes no 0 0 1 4 0 1 31.332 31.396 3 0.0013327 6085 20230619_1883_Aki_TMTPro18x_K_F4 110.87 70.827 104360 88349 109840 110150 152910 153260 123570 164650 144910 119260 139200 137660 133630 117160 130840 125490 147490 121110 96558 81056 111750 110040 154520 151970 127070 166030 146140 123500 142840 138270 136470 121930 133970 125780 140780 115180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69213000 11006 3093 10406 21023 16852 16852 1 9606 Homo sapiens -0.013165311281227332 GRDPVNPEK Unmodified 1010.5145 0.51450765 3283 O60568;B3KQQ3;C9JIX5 PLOD3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes no 0 0 1 4.5 0.5 1 1 32.842 32.911 3 0.0036809 6657 20230619_1883_Aki_TMTPro18x_K_F4 73.841 36.729 62832 31819 75780 68890 100180 106450 87224 96543 87706 68892 110110 116790 95537 88893 111170 49165 109120 107920 58060 29482 76226 66961 101700 104490 88766 98534 90100 72569 111370 115360 98733 90536 112310 53551 104420 101890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58781000 11007 3283 10407 21024;21025 16853 16853 1 9606 Homo sapiens 0.009670977780501744 GRDSYGGPPR Unmodified 1060.505 0.5050056 3564;3963 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;B3KRG5;H3BUY5;Q96E39;Q2VIN3 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 0 1 5.5 0.5 1 1 27.169 27.221 3 0.0003397 4730 20230619_1885_Aki_TMTPro18x_K_F5 100.88 18.462 43612 36470 39949 41436 58238 47947 50090 49067 51302 44904 47472 37744 49058 38619 38980 39868 52741 39869 40305 33431 41150 41540 58698 48068 51008 49929 52048 45399 48883 38704 49531 39899 40571 40049 50240 37915 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 48847000 11008 3564;3963 10408 21026;21027 16854;16855;16856 16854 3 9606 Homo sapiens -0.022826705074749043 GRDVETMR Unmodified 962.46036 0.46036359 779 A0A024RDV7;O00505;Q53F09 KPNA3 Importin subunit alpha;Importin subunit alpha-4 yes no 0 0 1 3.5 0.5 1 1 23.168 23.278 3 0.069494 3857 20230619_1882_Aki_TMTPro18x_K_F3 55.37 27.152 38798 23353 38392 46328 52888 52453 47337 52674 47949 44807 61972 61617 60096 52721 58087 30469 65397 58090 35813 21585 39293 44929 53584 52552 48094 53580 49350 46209 62846 61445 61299 53526 59342 32624 62450 54908 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45935000 11009 779 10409 21028;21029 16857 16857 1 9606 Homo sapiens -0.022368176451550426 GRDVIAQSQSGTGK Unmodified 1402.7165 0.71645494 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 1 7.5 0.5 1 1 35.138 35.168 3 3.9025E-16 7370 20230619_1887_Aki_TMTPro18x_K_F7 195.2 163.71 119230 61236 124510 138060 189010 178290 156050 161790 179430 146530 209490 212140 204970 186130 170190 109710 233810 198810 110030 56775 127060 133470 190100 176780 159990 166010 182520 150970 213290 211350 207780 188850 176810 116710 222850 188010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 865010000 11010 543 10410 21030;21031 16858;16859 16858 2 9606 Homo sapiens 0.03120536672918206 GRDWNVDLIPK Unmodified 1311.6935 0.69353465 1080;2533 A0A0S2Z3X8;P31150;B4DHX4;B4DH24;G5E9U5;Q6IAT1;B4DLV7;P50395;P50395-2;Q5SX87;Q5SX86;V9GYF8;Q5SX90;V9GYJ7 GDI1;GDI2 Rab GDP dissociation inhibitor alpha;Rab GDP dissociation inhibitor beta no no 0 0 1 7.5 0.5 1 1 52.921 52.994 3 0.002053 14797 20230619_1888_Aki_TMTPro18x_K_F8 85.845 55.407 659510 621280 750240 700170 609410 659310 740060 693210 730480 778360 818200 713540 814590 756290 901100 805640 843890 818740 611100 569230 752130 700540 647080 670870 738690 708350 748390 780090 834850 729180 835890 781190 911070 809950 807800 777600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3165999999.9999995 11011 1080;2533 10411 21032;21033 16860;16861 16861 2 9606 Homo sapiens 0.0501556234612508 GREEESDQIR Unmodified 1217.5636 0.56364269 2091 B4DET0;A8K6G9;Q92620;B4DN69;B4DM30;Q92620-2 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes no 0 0 1 1 0 1 26.204 26.204 3 0.002407 4534 20230619_1880_Aki_TMTPro18x_K_F1 79.741 56.136 5794.2 2736.5 5014.4 5736.1 5648.1 8020.2 5006.7 6933.3 6777 4528.8 6592 6370.7 5948.2 6308.1 6472 3313.3 6955.4 7972 5337.6 2535.2 5173.7 5569 5819.4 7899.7 5146.2 7088 6786 4766.7 6743.4 6379.9 6124.4 6351.9 6580.8 3649.2 6657.2 7518.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11532000 11012 2091 10412 21034 16862 16862 1 9606 Homo sapiens -0.03643658723672161 GREEHYEEEEEEEEDGAAVAEK Unmodified 2563.047 0.04702895 2991 F8W785;O00461 GOLIM4 Golgi integral membrane protein 4 yes no 0 0 1 1 0 1 40.08 40.08 4 8.4559E-17 10141 20230619_1880_Aki_TMTPro18x_K_F1 158.73 150.74 11352 9176.3 12511 12782 10645 12588 11184 13445 13949 15797 18420 21663 19256 16195 17046 22389 18681 28740 10505 8430.3 12585 12609 11227 12759 11347 13737 14238 16008 18744 21539 19519 17221 17496 22732 17927 27193 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34123000 11013 2991 10413 21035 16863 16863 1 9606 Homo sapiens -0.17197268351628736 GREEINFVEIK Unmodified 1332.7038 0.70376498 1087 A0A0S2Z470;Q96FT4;A0A0S2Z456;Q92733;H0YE12;H0Y679 PRCC Proline-rich protein PRCC yes no 0 0 1 5 0 1 49.94 50.016 3 0.00022378 13762 20230619_1885_Aki_TMTPro18x_K_F5 114.24 58.814 84448 67515 79830 95095 90773 104570 94711 92863 123960 106090 101250 104970 115110 99944 106860 137970 111150 132470 78041 62036 81743 93839 93619 104720 96144 96045 123710 106540 105590 106500 116680 105260 109230 137630 106460 125800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131760000 11014 1087 10414 21036 16864 16864 1 9606 Homo sapiens 0.05072125280707951 GREEWESAALQNANTK Unmodified 1802.8547 0.85473933 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2 UBR4 E3 ubiquitin-protein ligase UBR4 no no 0 0 1 5 0 1 45.311 45.389 3 1.6633E-14 11802 20230619_1885_Aki_TMTPro18x_K_F5 181.51 161.13 40412 35690 37497 39443 41870 41970 38663 41586 45827 51038 49446 50110 52102 41054 45916 56618 54151 54666 37364 32701 38400 39573 43043 42267 39413 42753 46471 51030 50678 50609 52781 43485 47314 56502 51735 51940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49835000 11015 4061 10415 21037 16865 16865 1 9606 Homo sapiens -0.014573848692180036 GREEYEGPNK Unmodified 1177.5364 0.53636531 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 1 3 0.816 1 1 1 33.124 33.187 3 0.023812 6808 20230619_1883_Aki_TMTPro18x_K_F4 58.829 31.347 63684 36214 72552 77312 97687 111770 77214 95382 94622 75500 105750 104240 94986 91880 80411 50504 135300 89084 58843 33524 73368 75056 98967 109920 79647 97979 95769 78280 107460 104030 96715 92986 84855 53705 128610 84373 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 690930000 11016 1450 10416 21038;21039;21040 16866;16867 16867 2 9606 Homo sapiens -0.04530142264047754 GREFGNLTR Unmodified 1048.5414 0.5413911 2688 B7Z4A1;O14949 UQCRQ Cytochrome b-c1 complex subunit 8 yes no 0 0 1 3.67 3.09 1 1 1 34.587 34.603 3 0.00039181 7330 20230619_1888_Aki_TMTPro18x_K_F8 119.68 82.205 339800 295640 316960 353830 500010 431760 450890 481180 487710 318370 392030 398100 403070 341270 398280 395350 435310 394550 314150 271100 326750 353660 502630 432090 458480 483650 490450 333070 407340 398880 410870 356700 407080 396440 415860 374900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 481380000 11017 2688 10417 21041;21042;21043 16868;16869 16869 2 9606 Homo sapiens 0.01906206389230647 GREFGVTTGR Unmodified 1078.552 0.55195579 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 0 1 7.5 0.5 1 1 32.68 32.723 3 0.0004554 6596 20230619_1888_Aki_TMTPro18x_K_F8 99.215 72.613 147370 126200 133010 130900 166330 164700 156720 164570 175210 178050 185950 181210 203420 151900 167860 205170 220730 173730 136200 115580 136770 132340 169770 164090 159190 168420 177970 179290 190980 182900 205270 160520 174420 203460 210360 165510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 241110000 11018 351 10418 21044;21045 16870 16870 1 9606 Homo sapiens 0.01582189043665494 GREFSFEAWNAK Unmodified 1440.6786 0.67861287 2144 X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9 GTF2I General transcription factor II-I yes no 0 0 1 1 0 1 52.504 52.504 3 1.3245E-09 15367 20230619_1880_Aki_TMTPro18x_K_F1 144.51 100.31 353830 349230 347810 311690 304250 338660 343090 344990 334050 370540 335230 295330 339920 288320 357770 361270 369770 326430 327560 319320 352920 318660 320460 340850 343600 352620 341170 370730 343960 303140 347640 301540 364150 359940 353380 310570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131930000 11019 2144 10419 21046 16871 16871 1 9606 Homo sapiens -0.024099295218775296 GREGPVQFEEDPFGLDK Unmodified 1918.9061 0.9061062 3859 Q6I9S2;Q13573;G3V4X8;B7Z9X2;B4DY36;A0A024R6E3;Q9ULA6 SNW1 SNW domain-containing protein 1 yes no 0 0 1 4 0 1 56.806 56.812 3 1.1384E-06 16979 20230619_1883_Aki_TMTPro18x_K_F4 116.6 81.302 75272 65559 70844 77921 78792 84720 83741 80510 89444 92643 87639 71347 92646 64718 89709 96296 96152 97851 69596 60113 72497 77769 81333 85076 84322 82861 90779 92326 90126 73248 94167 68746 91666 96315 91947 92916 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60952000 11020 3859 10420 21047 16872 16872 1 9606 Homo sapiens -0.016590608952128605 GRELPTAFDYVEFTR Unmodified 1799.8842 0.88424855 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 7 0.816 1 1 1 56.806 56.867 3 6.728E-14 16480 20230619_1887_Aki_TMTPro18x_K_F7 146.88 135.77 158330 139430 147620 157870 142680 150230 157950 175660 178790 180990 186980 182730 200100 161340 189200 232550 209340 208810 146390 127790 150820 157900 148990 153130 159110 177790 181340 182620 192020 184850 203250 170900 193940 231070 200100 198580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1403000000 11021 1022;3868 10421 21048;21049;21050 16873;16874 16874 2 9606 Homo sapiens 0.01630179146854971 GREPASCEDLCGGGVGADGGGSDR Unmodified 2334.9553 0.95533437 1773 A0A8I5KYZ0;A0A8I5QKL9;A0A8I5KU53;Q15746-4;Q15746-5;Q15746-2;Q15746-3;Q15746-6;Q15746 MYLK Myosin light chain kinase, smooth muscle;Myosin light chain kinase, smooth muscle, deglutamylated form yes no 0 0 1 2 0 1 35.787 35.843 3 0.00261 8028 20230619_1881_Aki_TMTPro18x_K_F2 68.375 59.774 2866.3 2412.9 2221.6 3839.3 4502 4594 5135.7 5344.5 5367.6 6424.5 4741.7 5720.8 6321.5 5296.8 5632.6 4897 4000.7 5479.6 2645.9 2220 2356.1 3766 4510.1 4603.9 5144 5433.5 5440.5 6410.4 4971.4 5816 6365.6 5459.1 5646 4963.7 3853.8 5193 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7888400 11022 1773 10422 21051 16875 16875 1 9606 Homo sapiens -0.15874508730894377 GREPEASGLK Unmodified 1042.5407 0.5407224 3896 Q14684;Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 1 4.5 0.5 1 1 34.455 34.524 3 0.00017082 7334 20230619_1885_Aki_TMTPro18x_K_F5 125.24 85.368 124310 75524 122600 127530 156860 163470 138230 146480 159980 129980 162320 158060 182730 139070 152900 94766 186350 151200 114750 69638 125210 124900 159680 162120 141160 150350 161770 133160 167270 158450 184330 141890 157490 99322 177730 143140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157590000 11023 3896 10423 21052;21053 16876;16877 16877 2 9606 Homo sapiens 0.021153669495106442 GREVLDGR Unmodified 900.47773 0.47772821 867 A0A087WZ85;A0A0A0MSX4;Q1RMC8;Q2M1J3;Q9Y6N7-6;Q9Y6N7-5;Q9Y6N7-4;Q9Y6N7-3;Q9Y6N7;Q9Y6N7-2;B7Z687 ROBO1 Roundabout homolog 1 yes no 0 0 1 4 0 2 29.242 29.312 3 0.014151 5333 20230619_1883_Aki_TMTPro18x_K_F4 80.688 51.962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11024 867 10424 21054;21055 16878;16879 16878 2 9606 Homo sapiens 0.023508459521394798 GRFPESSAVQSSSFER Unmodified 1769.8333 0.83327561 4613 Q9NWH9;H7C3F4;A0A024R5U7;A0A024R5X3;Q9NWH9-3;H0YMM0 SLTM SAFB-like transcription modulator yes no 0 0 1 6.5 0.5 1 1 40.864 40.944 3 1.6642E-14 9619 20230619_1887_Aki_TMTPro18x_K_F7 181.51 164.37 78734 67623 75080 80456 86111 92565 85994 89223 94386 93001 97961 91405 109990 96175 72553 103870 601540 109890 72798 62009 76767 80366 88558 92621 86994 91464 95854 93758 100770 93074 110890 99465 103520 104500 567030 106110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 266880000 11025 4613 10425 21056;21057 16880;16881 16881 2 9606 Homo sapiens -0.020847698979650886 GRGFGSEEGSR Unmodified 1137.5163 0.51629857 6 A0A023T787;Q9Y5S9 RBM8;RBM8A RNA-binding protein 8A yes no 0 0 1 3 0.816 1 1 1 23.342 23.44 3 0.00040894 3813 20230619_1882_Aki_TMTPro18x_K_F3 88.021 77.263 255450 210400 253400 254750 362780 298450 280620 312250 297930 271530 334470 317430 326170 274570 274670 253790 425620 317180 236200 193000 259080 254280 365150 299070 288400 316830 303990 277960 340910 318740 330820 283640 288350 259030 405020 300980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 306900000 11026 6 10426 21058;21059;21060 16882 16882 1 9606 Homo sapiens -0.046958932039842693 GRGPGLLEPTDAGGPPR Unmodified 1645.8536 0.85361712 4354 Q96GP6-2;Q96GP6 SCARF2 Scavenger receptor class F member 2 yes no 0 0 1 6 0 1 40.159 40.251 3 0.027184 9646 20230619_1886_Aki_TMTPro18x_K_F6 51.566 31.826 29578 27202 35100 28807 35077 41790 39744 38291 49850 36046 46426 42092 46265 39600 39856 45396 48655 43297 27413 24912 35166 29157 36583 41192 40112 39291 50011 36769 47749 42412 46929 41228 41155 45397 46431 41165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32937000 11027 4354 10427 21061 16883 16883 1 9606 Homo sapiens 0.05652445552482277 GRGTGEAEEEYVGPR Unmodified 1605.7383 0.73831259 3871 Q13895;F8WBL2 BYSL Bystin yes no 0 0 1 1.5 0.5 1 1 33.824 33.824 3 1.2027E-07 7518 20230619_1880_Aki_TMTPro18x_K_F1 132.08 113.26 17860 13101 16863 16334 19915 19640 18634 19190 20685 17519 22015 17365 17954 15952 19616 17777 20583 16523 16497 12027 17252 16277 20395 19604 18932 19587 20994 17796 22319 17609 18536 16593 19959 17774 19657 15722 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11771000 11028 3871 10428 21062;21063 16884;16885 16884 2 9606 Homo sapiens -0.04032703369171031 GRHEVGALVR Unmodified 1092.6152 0.61522475 3027 H0Y714;Q96G21;E7ENR5;B8ZZ47;B9A008 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 yes no 0 0 1 1 0 1 28.157 28.157 3 0.036801 5285 20230619_1880_Aki_TMTPro18x_K_F1 50.284 27.754 15325 7410.4 13938 12597 14807 17421 15356 16104 17487 15592 14978 10321 14755 12383 13821 12754 17044 13441 14124 6842.4 14280 12355 15340 17207 15521 16518 17593 15633 15445 10801 15025 12734 14241 12854 16251 12773 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3050300 11029 3027 10429 21064 16886 16886 1 9606 Homo sapiens 0.072621745515562 GRIPVNTR Unmodified 911.5301 0.53009814 425 B4DFL1;E9PEX6;B4DMK9;A0A024R713;P09622;P09622-2;P09622-3 DLD Dihydrolipoyl dehydrogenase;Dihydrolipoyl dehydrogenase, mitochondrial yes no 0 0 1 3 1.41 1 1 1 1 1 29.33 29.394 3 0.002426 5319 20230619_1883_Aki_TMTPro18x_K_F4 110.87 81.785 337550 237780 305820 366080 443040 339120 424190 455140 413910 381020 430610 348140 436890 354780 307530 337120 464090 343230 311610 218830 315580 358720 447570 347840 428490 454850 422900 387930 440580 355420 439540 364960 323730 339400 441690 326380 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 356090000 11030 425 10430 21065;21066;21067;21068;21069 16887;16888;16889;16890 16889 4 9606 Homo sapiens 0.07079429085740685 GRLDAELGAQQR Unmodified 1312.6848 0.68476088 797 A0A075B7B1;O15061-2;O15061;C9JIE4;O15061-3 SYNM Synemin yes no 0 0 1 5 0 1 36.38 36.472 3 0.00047258 8103 20230619_1885_Aki_TMTPro18x_K_F5 99.732 82.406 29369 21733 30557 36170 54406 67817 40624 45871 54276 41939 49243 64062 42921 47632 55369 45216 69944 66098 27150 20017 31345 35701 54339 65617 42177 48244 54291 43303 50608 63410 44701 49511 56827 46680 66754 62573 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85688000 11031 797 10431 21070 16891 16891 1 9606 Homo sapiens 0.040925887096591396 GRLDYLSSLK Unmodified 1150.6346 0.63462279 1704 P08195-4;P08195-5;P08195;P08195-3;A0A7P0Z4P5;A0A7P0TAN7;A0A7P0Z4A0;A0A7P0T9F7;F5GZS6;P08195-2;A0A7P0TBF8;B4E2Z3;F5H056;F5GZI0;A0A7P0TAS6;A0A024R599;A0A7P0T8U7;A0A7P0T8F1;H0YH36;A0A7P0TAT7;F5H0E2;H0YFS2 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 1 2.5 0.5 1 1 50.753 50.814 3 0.00031922 14469 20230619_1882_Aki_TMTPro18x_K_F3 116.54 78.858 463510 382510 381930 418530 328110 404980 392580 390770 498970 269210 259970 194580 224270 181770 427200 312500 306280 234830 428000 350540 394190 419680 347530 410230 395310 397080 491970 276770 276390 201020 239660 194830 423510 307940 293720 224130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 948480000 11032 1704 10432 21071;21072 16892 16892 1 9606 Homo sapiens 0.06533086051786086 GRLPQLGEK Unmodified 996.57163 0.5716286 2414 B3KTJ9;Q8N163-2;Q8N163;H0YC69;E5RFJ3;H0YC58;E5RGU7 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 1 2 0 1 41.725 41.802 3 0.060482 10606 20230619_1881_Aki_TMTPro18x_K_F2 49.472 18.736 622650 485560 555640 610860 652760 734920 696730 709240 841190 663770 703410 605840 634390 567360 645790 798930 724010 544760 575070 445660 571880 608190 671980 733040 704260 724940 842680 671890 724560 617180 650570 598250 661610 784550 690740 520770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 289560000 11033 2414 10433 21073 16893 16893 1 9606 Homo sapiens 0.07320565054430972 GRPAGGPDPSLQPR Unmodified 1403.727 0.72696004 3848 Q13395 TARBP1 Probable methyltransferase TARBP1 yes yes 0 0 1 7 0 1 32.87 32.957 3 4.3397E-05 6510 20230619_1887_Aki_TMTPro18x_K_F7 107.74 81.221 17108 12328 14482 17095 16188 16441 16495 16759 18614 17760 21923 23238 20865 18407 16921 19952 24018 21866 15787 11331 14969 16859 16685 16683 16684 17133 18967 18059 22294 23174 21151 19223 17683 20125 22897 20756 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21340000 11034 3848 10434 21074 16894 16894 1 9606 Homo sapiens 0.041245641180239545 GRPAPGFHHGDGPGNAVQEIMIPASK Oxidation (M) 2655.2976 0.29760236 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 1 1 8 0 1 43.464 43.474 5 3.7901E-09 10864 20230619_1888_Aki_TMTPro18x_K_F8 115.11 114.03 29787 20457 29260 26953 33541 33041 30486 29974 36216 29096 33487 32960 34295 26865 30381 35986 35393 34569 27512 18795 29810 26769 34396 32886 31098 30810 36444 29584 34515 33097 34780 28401 31270 35920 33810 32851 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135710000 11035 2644;4322 10435 21075 16895 16895 1594 1 9606 Homo sapiens 0.03616546741250204 GRPGPEGAGPAAGLDVR Unmodified 1575.8118 0.8117523 4462 Q9BXK1 KLF16 Krueppel-like factor 16 yes yes 0 0 1 5.5 0.5 1 1 38.168 38.252 3 1.684E-13 8784 20230619_1886_Aki_TMTPro18x_K_F6 158.58 104.43 60434 47642 59891 59634 70494 65299 65903 66307 69985 67854 78187 76176 79665 65372 69870 85360 75859 76123 55865 43723 61023 59326 72157 65659 66864 67712 71398 68740 79881 76636 80775 68834 71639 84899 72525 72399 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 149880000 11036 4462 10436 21076;21077 16896;16897 16897 2 9606 Homo sapiens 0.046878898639761246 GRPHVKPTNYDK Unmodified 1410.7368 0.73679645 2324 B2RDV7;Q96G46;Q96G46-2;K7EJX8;K7EPA4 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)];tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes no 0 0 2 3 0 1 32.344 32.422 5 0.001846 6515 20230619_1882_Aki_TMTPro18x_K_F3 89.301 44.021 42367 32534 40820 40743 53623 53529 43440 53662 52054 52922 54042 53209 54378 50975 49861 58961 64053 56187 39149 29861 41774 40646 54385 53171 44692 54742 52656 53527 55360 53946 55321 53054 51612 58945 61094 53425 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22901000 11037 2324 10437 21078 16898 16898 1 9606 Homo sapiens 0.047857521233936495 GRPLAEESEQER Unmodified 1399.6692 0.66917039 2528 B4DS67;B4DLH2;Q8N357 C2orf18;SLC35F6 Solute carrier family 35 member F6 yes no 0 0 1 1.5 0.5 1 1 29.132 29.168 3 5.6032E-07 5680 20230619_1880_Aki_TMTPro18x_K_F1 147.18 111.53 82540 55543 69111 72487 89726 88806 88945 89878 122610 75382 86981 90158 83281 78167 86484 94455 91528 86192 76135 51030 71644 72028 91558 88597 90719 91346 121420 77504 90787 90491 85343 81825 88209 94183 87488 81973 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181580000 11038 2528 10438 21079;21080 16899;16900 16899 2 9606 Homo sapiens -0.014677425980380576 GRPLPEPYEASR Unmodified 1370.6943 0.69426293 833 Q15334;A0A087WW77 LLGL1 Lethal(2) giant larvae protein homolog 1 yes no 0 0 1 5 0 1 36.176 36.268 3 0.0001856 7984 20230619_1885_Aki_TMTPro18x_K_F5 106.26 85.387 22963 20479 23291 24031 27603 34730 26766 31172 35268 36996 37312 37869 37389 29198 33214 33414 41895 32820 21248 18774 23708 24119 28355 34215 27312 32218 35546 37098 38186 38091 37947 30638 34323 33482 39938 31212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30601000 11039 833 10439 21081 16901 16901 1 9606 Homo sapiens 0.023743569951875543 GRPYDYNGPR Unmodified 1193.5578 0.55776945 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 1 7 0.816 1 1 1 32.562 32.605 3 1.5325E-05 6519 20230619_1888_Aki_TMTPro18x_K_F8 150.1 131.79 214730 151950 193010 193260 237090 275450 248480 234300 289310 278920 327040 337030 320990 275100 301040 321060 335060 325070 198220 139530 198580 192830 243280 271290 251100 243380 293860 281310 333570 337400 326860 288190 308450 322100 320190 308750 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 483790000 11040 909 10440 21082;21083;21084 16902;16903;16904;16905 16905 4 9606 Homo sapiens -0.03126712444691293 GRQNISPDK Unmodified 1013.5254 0.52540669 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 7 0 1 31.182 31.28 3 0.032324 5852 20230619_1887_Aki_TMTPro18x_K_F7 50.978 22.021 21758 17000 27415 22984 33551 38123 26865 37159 33066 23654 33652 44166 29271 30587 35970 15992 54674 45187 20156 15615 27442 22925 34188 37360 27703 37628 33319 25250 34393 43380 30395 31233 37369 18004 52065 42645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14483000 11041 3881 10441 21085 16906 16906 1 9606 Homo sapiens 0.019185001523169376 GRRPSQDDVEAAPEETR Unmodified 1911.9035 0.90348044 3328 O94761 RECQL4 ATP-dependent DNA helicase Q4 yes yes 0 0 2 2 0 1 29.125 29.197 4 8.6824E-14 5414 20230619_1881_Aki_TMTPro18x_K_F2 165.45 159.34 3412.8 1631.9 2259.4 2633.4 4472.2 4306.9 5491.6 4115.4 5483.9 3787.8 4412 4014.5 3475.7 4851.4 3647.8 3608.6 3944.3 4840.2 3138.7 1505.9 2428.3 2597.2 4493.5 4223.1 5468.5 4210.1 5536.6 3858.2 4534.6 4094.4 3598.8 4904.5 3722.9 3716.5 3777.2 4580.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16219000 11042 3328 10442 21086 16907 16907 1 9606 Homo sapiens -0.015995163001434776 GRSDYDGIGSR Unmodified 1181.5425 0.54251332 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;B4DLU5;A0A2R8YDH3;B4E3C4;A0A2R8Y650;A0A2R8YCU0;A0A2R8YF89;B4DLA0 DDX3X ATP-dependent RNA helicase DDX3X yes no 0 0 1 3.5 0.5 1 1 30.98 31.055 3 9.1752E-05 5930 20230619_1883_Aki_TMTPro18x_K_F4 125.82 103.77 78291 59425 75845 82543 105020 96078 95476 97293 105280 93237 106810 103720 105440 84387 93206 92380 126360 98995 72342 54606 77707 81620 106370 96184 97121 99189 106740 94767 109420 104160 107070 88135 96801 93091 120390 94056 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 226060000 11043 1018 10443 21087;21088 16908;16909 16909 2 9606 Homo sapiens -0.04099624032551219 GRSPDELPSAGGDGGK Unmodified 1498.7012 0.7011988 1901 A0RZB8;Q6URC4;O60610-2;O60610-3;O60610;A0A1E1ERW3;A0A2R8Y5N1;B4E2I7 DIAPH1 Protein diaphanous homolog 1 yes no 0 0 1 3.5 0.5 1 1 37.26 37.313 3 5.8757E-11 8487 20230619_1882_Aki_TMTPro18x_K_F3 153.36 130.84 80408 67084 77655 76148 81952 85251 76811 84349 97238 107040 112830 118810 124990 101350 103000 132800 139340 124260 74339 61494 79151 76312 84646 85532 78435 86812 98600 107300 115580 119500 126140 106790 107280 132380 132860 118170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83040000 11044 1901 10444 21089;21090 16910;16911 16910 2 9606 Homo sapiens -0.028203749149497526 GRVPPPAPAPSTEGLPR Unmodified 1697.9213 0.92130275 518 A0A024R8I8;Q86UD0 C9orf140;SAPCD2 Suppressor APC domain-containing protein 2 yes no 0 0 1 1 0 1 39.499 39.499 3 0.072071 9858 20230619_1880_Aki_TMTPro18x_K_F1 49.535 34.563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11045 518 10445 21091 16912 16912 1 9606 Homo sapiens 0.10025895483272507 GRYEITAEDSQEK Unmodified 1524.7056 0.70561548 4529 Q9H814;B4DPU2 PHAX Phosphorylated adapter RNA export protein yes no 0 0 1 2.5 0.5 1 1 38.708 38.768 3 2.126E-15 9066 20230619_1882_Aki_TMTPro18x_K_F3 159.82 128.59 262640 204250 234430 252770 300730 325680 305250 285330 343870 343340 356590 344580 357720 292710 289640 401250 383450 348890 242560 187440 241610 252210 307280 322890 308630 295810 348730 343960 365150 348140 361830 309360 301520 398210 365730 332060 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 229800000 11046 4529 10446 21092;21093 16913;16914;16915;16916 16915 4 9606 Homo sapiens -0.03574910492034178 GSAEAAEDDEIR Unmodified 1261.5422 0.54223854 4373 Q96JQ0 DCHS1 Protocadherin-16 yes yes 0 0 0 1 0 1 35.532 35.532 2 0.0051855 8193 20230619_1880_Aki_TMTPro18x_K_F1 83.862 63.872 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11047 4373 10447 21094 16917 16917 1 9606 Homo sapiens -0.07807088543063401 GSAFAIGSDGLCCQSR Unmodified 1684.7297 0.72973851 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;A0A7I2YQ77;A0A087WZ71;B4DP70;A0A087X2G1;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8;A0A7I2V4Q0;A0A7I2YQD0 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 7.5 0.5 2 2 49.998 50.076 2;3 2.7814E-33 13564 20230619_1888_Aki_TMTPro18x_K_F8 252.42 239.47 189200 169600 206760 198550 171660 193730 202140 184970 226980 248550 227530 187960 243380 191250 199560 277850 239770 259530 175190 155470 208000 198150 181890 196120 202880 191320 230030 245960 233800 193890 245740 201880 206360 276530 229160 246620 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 687880000 11048 1661 10448 21095;21096;21097;21098 16918;16919;16920 16920 3 9606 Homo sapiens -0.08523716601598608 GSAFSTSISK Unmodified 983.49238 0.49237523 4109 Q6IBR2;Q9Y285;K7ER00;K7ER16;K7EPH2 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 1.5 0.5 1 1 46.205 46.244 3 0.0021007 12829 20230619_1880_Aki_TMTPro18x_K_F1 84.658 50.792 205260 159860 194370 213360 236790 228940 237290 240970 289350 208420 220640 210530 229940 176360 216420 237920 239490 200070 189660 146820 199080 211260 242450 230640 240780 244470 288870 212570 229960 212610 233670 186320 221690 235930 228650 190570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 323130000 11049 4109 10449 21099;21100 16921;16922 16921 2 9606 Homo sapiens -3.126690364751994E-05 GSAGAPSVENVK Unmodified 1114.5619 0.56185177 389 B5BUD5;B2R8E4;A0A024R6A5;P35813;P35813-3;P35813-2;E9PKB5;E9PL75;E9PJN3 PPM1A Protein phosphatase 1A yes no 0 0 0 5 0 1 41.168 41.255 2 2.3301E-07 10053 20230619_1885_Aki_TMTPro18x_K_F5 164.65 113.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11050 389 10450 21101 16923 16923 1 9606 Homo sapiens 0.00915332258387025 GSAITGPVAK Unmodified 899.50763 0.50763136 153 Q9BTQ7;A0A024R1Q8;P62829;J3KTJ3 RPL23 60S ribosomal protein L23 yes no 0 0 0 3.67 3.09 1 1 1 42.661 42.689 2;3 1.0217E-06 10543 20230619_1888_Aki_TMTPro18x_K_F8 179.37 134.68 376040 228640 349500 365940 487010 494520 427450 439230 526920 402620 455630 432820 544860 400670 391760 356410 573570 448700 346950 210670 359360 359730 493250 488910 437450 451430 528110 410090 474390 436890 545730 412480 410790 364220 546160 425650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1165200000 11051 153 10451 21102;21103;21104 16924;16925 16925 2 9606 Homo sapiens 0.053857848974644185 GSALAALHCGRPPESPVNYGSPPSIADTLFSR Unmodified 3323.6357 0.63570878 1847 A0A8V8TPV5;A0A8V8TQZ3;Q8WWQ0;A0A8V8TQM4 PHIP PH-interacting protein yes no 0 0 1 4 0 1 59.27 59.273 4 4.8305E-15 18035 20230619_1883_Aki_TMTPro18x_K_F4 131.78 118.85 17943 16036 20552 20953 14751 17551 20921 18196 22506 21537 19039 20125 21345 16706 19158 23717 25446 22512 16621 14717 20579 20713 15947 18018 20785 18650 22704 21544 19807 20377 21608 17723 19890 23638 24265 21406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96728000 11052 1847 10452 21105 16926 16926 1 9606 Homo sapiens 0.06683635356057493 GSALPLAIK Unmodified 868.5382 0.53820321 3627;4667 P51805;Q9UIW2;B4DE20;B3KY38;Q6ZTY7;A0A024R7A6;Q9HCM2-4;Q9HCM2;O75051 PLXNA3;PLXNA1;PLXNA4B;PLXNA4;PLXNA2 Plexin-A3;Plexin-A1;Plexin-A4;Plexin-A2 no no 0 0 0 3 0 1 53.999 54.051 2 0.023012 15960 20230619_1882_Aki_TMTPro18x_K_F3 71.692 33.532 123510 119200 107700 110070 96169 118490 109010 114690 167260 122800 108140 94980 120680 103370 121160 128070 106220 92657 114210 109030 110570 112130 101400 119150 110960 117620 164640 122960 114200 98039 122800 107620 122410 126330 101680 88431 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30904000 11053 3627;4667 10453 21106 16927 16927 1 9606 Homo sapiens 0.09867563282512037 GSAPPGPVPEGSIR Unmodified 1319.6834 0.68336389 2269 V9HWG9;B2R983;P78417;P78417-2 HEL-S-21;GSTO1 Glutathione S-transferase omega-1 yes no 0 0 0 5 0.707 1 2 1 40.678 40.756 2;3 9.9662E-07 9818 20230619_1885_Aki_TMTPro18x_K_F5 125.29 106.98 111840 74849 104690 110370 142190 150880 131140 126730 151850 137530 150300 148410 162100 131480 133530 177180 182410 166260 103240 68864 107540 109010 144420 148910 133480 131410 153470 138800 154760 149690 163720 138600 139210 176560 173950 158090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1136700000 11054 2269 10454 21107;21108;21109;21110 16928;16929 16928 2 9606 Homo sapiens 0.036309546208940446 GSATNYITR Unmodified 981.48796 0.48795855 2315 B5MCF9;B2RDF2;O00541;O00541-2 PES1 Pescadillo homolog yes no 0 0 0 7 0 1 36.982 37.047 2 0.071311 8111 20230619_1887_Aki_TMTPro18x_K_F7 63.734 43.179 48767 33375 46835 45481 53480 61166 56069 54439 61511 42527 43537 43613 43435 36169 44379 50016 55914 47017 45032 30676 47835 45136 55115 60484 56537 55755 61587 43685 45524 44003 44400 38286 45775 49854 53325 44721 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22906000 11055 2315 10455 21111 16930 16930 1 9606 Homo sapiens -0.0035259111330105952 GSATYCTVCSK Unmodified 1232.5166 0.51655784 4316 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 0 0 8 0 1 40.143 40.132 3 0.00030853 9532 20230619_1888_Aki_TMTPro18x_K_F8 101.93 87.943 79054 47778 83876 85265 95250 115020 98908 100550 128690 95970 107440 109010 116080 92638 100190 102270 117590 112710 73017 44090 85002 83350 98245 113620 100420 103580 128470 97710 111610 109520 117420 96646 103130 103200 112310 106960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23533000 11056 4316 10456 21112 16931 16931 1 9606 Homo sapiens -0.09039977590668968 GSAVPSDGQAR Unmodified 1043.4996 0.49958587 1904 A1L192;Q9BWW4-2;Q9BWW4-3;Q9BWW4 SSBP3 Single-stranded DNA-binding protein 3 yes no 0 0 0 3 0 1 29.78 29.873 2 0.00085027 5542 20230619_1882_Aki_TMTPro18x_K_F3 107.79 87.459 11817 5063.5 11240 12762 15209 19596 11278 12397 11921 11450 19700 21277 14822 18481 17015 6241.7 23196 21402 10890 4710.2 11535 12320 15403 19107 11632 13138 12404 11928 19646 21033 15428 18499 17542 7356.6 22121 20174 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8573700 11057 1904 10457 21113 16932 16932 1 9606 Homo sapiens -0.020423940899490844 GSCFLINTADR Unmodified 1252.587 0.58702067 563;3927 A0A024R9B5;B4DMM7;Q15291;B4DLF8;Q15291-2 RBBP5 Retinoblastoma-binding protein 5 no no 0 0 0 8 0 1 48.639 48.706 2 0.005968 12965 20230619_1888_Aki_TMTPro18x_K_F8 84.17 67.394 23385 20910 17960 24082 23801 24502 19639 21124 31261 28143 27351 30515 30629 29782 23815 38026 39267 35080 21595 19165 18814 24058 24174 24680 20402 22005 31041 28157 28399 30851 30881 31158 25266 37872 37392 33366 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13266000 11058 563;3927 10458 21114 16933 16933 1 9606 Homo sapiens -0.029169362107040797 GSDCGIVNVNIPTSGAEIGGAFGGEK Unmodified 2505.1806 0.1805665 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GW82;A0A1B0GUA1;A0A1B0GTJ4;A0A1B0GV49 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 6.5 0.5 1 1 61.588 61.635 3 4.875E-14 18829 20230619_1886_Aki_TMTPro18x_K_F6 138.25 124.52 246800 194290 241290 231500 223840 247110 250080 230330 232880 247970 276690 294100 291810 276320 246590 305000 315730 344220 228110 178220 245240 231010 234510 248350 250200 237050 240040 251050 282600 295900 295430 287040 255690 308060 301610 326420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148480000 11059 1415 10459 21115;21116 16934 16934 1 9606 Homo sapiens -0.011816559890121425 GSDFDCELR Unmodified 1097.4448 0.44477311 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 2.5 1.12 1 1 1 1 42.824 42.872 2 1.7788E-06 11135 20230619_1881_Aki_TMTPro18x_K_F2 190.73 168.24 3931400 3017100 3352100 3453000 3700600 4051600 4057700 4019600 4182000 4387500 4500800 4335500 5165500 4042200 3733900 5582400 4282000 4742900 3629400 2766800 3459400 3460500 3826400 4051600 4074900 4117800 4268400 4412400 4629400 4397200 5180400 4261200 3862900 5532400 4094900 4512000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7980099999.999999 11060 1865 10460 21117;21118;21119;21120 16935;16936 16936 2 9606 Homo sapiens -0.10005148952905074 GSDGAASSYQLK Unmodified 1182.5517 0.55168102 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;Q59F36 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 0 0 6.5 0.5 1 1 42.763 42.848 3 6.8857E-06 10771 20230619_1886_Aki_TMTPro18x_K_F6 138.75 87.487 179780 121580 160850 180390 178520 206880 195600 203580 234600 196410 231900 222620 215710 187600 207670 203910 253170 236180 165920 111860 165380 177610 184660 207010 197440 207990 236500 199740 237290 223660 220360 195560 213790 206490 241680 224050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 178770000 11061 1717 10461 21121;21122 16937 16937 1 9606 Homo sapiens -0.03229275466856052 GSDIIIVGR Unmodified 928.53418 0.53418046 2076 A8K5J1;P11172;B5LY71;P11172-3;B5LY64;B5LY69;P11172-2;B5LY70;P11172-4 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase;Orotidine 5'-phosphate decarboxylase yes no 0 0 0 6.5 0.5 1 1 46.83 46.916 2 0.0097162 12575 20230619_1886_Aki_TMTPro18x_K_F6 85.666 56.504 88566 86236 94319 95171 106390 106260 116800 99518 106210 105830 108320 91277 108380 79562 126750 95682 87684 101610 82036 78988 95521 95561 109670 106520 116810 102340 108910 106170 110990 92968 111330 83400 126240 96326 84369 96392 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102880000 11062 2076 10462 21123;21124 16938 16938 1 9606 Homo sapiens 0.06705473788804284 GSDQAIITLR Unmodified 1072.5877 0.58767259 1707 B4DY23;A0A7P0TA85;Q54A51;B4DNE1;P35613-2;P35613;A0A087WUV8;P35613-3;P35613-4;A0A7P0TB04;A0A7P0T8A7 hEMMPRIN;BSG Basigin yes no 0 0 0 6 0.816 1 1 1 46.516 46.599 2 1.3214E-06 12349 20230619_1886_Aki_TMTPro18x_K_F6 174.98 132.38 666000 568470 623600 636200 711610 733480 742050 713430 812850 800640 834100 785240 843030 652660 788300 888460 819740 792330 615680 520990 638370 638450 732690 734180 748610 732530 825070 803980 854890 793720 857060 690250 804860 883380 783830 753680 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1408100000 11063 1707 10463 21125;21126;21127 16939;16940;16941;16942 16940 4 9606 Homo sapiens 0.05428226500657729 GSDQNASLYWLAR Unmodified 1479.7106 0.71064128 2410 B3KT25;Q96S55-2;Q96S55;Q96S55-4;Q96S55-3 WRNIP1 ATPase WRNIP1 yes no 0 0 0 8 0 1 55.944 56.006 2 1.963E-12 16142 20230619_1888_Aki_TMTPro18x_K_F8 179.19 141.72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11064 2410 10464 21128 16943 16943 1 9606 Homo sapiens -0.010025618387317081 GSDSIAYDK Unmodified 954.42944 0.42944062 1741 P35611-3;E7EV99;P35611;P35611-4;P35611-6;P35611-2;A0A804HL01;E7ENY0;P35611-5;Q96D30 ADD1 Alpha-adducin yes no 0 0 0 3 0 1 41.997 42.06 2 6.0492E-06 10483 20230619_1882_Aki_TMTPro18x_K_F3 133.23 92.206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11065 1741 10465 21129 16944 16944 1 9606 Homo sapiens -0.04959692478416855 GSDSLIK Unmodified 718.38612 0.38611924 4405 Q99623;Q99623-2;Q9BXV3 PHB2 Prohibitin-2 yes no 0 0 0 5 0.816 1 1 1 42.981 43.054 2 0.007007 10772 20230619_1885_Aki_TMTPro18x_K_F5 128.57 14.027 398310 205460 457860 502610 717850 659670 546530 680930 653230 431350 692180 731360 684810 597620 689140 249770 710730 654170 367920 190780 464160 484640 719380 655250 564620 687110 660090 458620 708380 723670 699310 602830 699320 280810 679420 617260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 946830000 11066 4405 10466 21130;21131;21132 16945;16946 16946 2 9606 Homo sapiens 0.015661625349594033 GSDVIIMLVGNK Unmodified 1244.6799 0.67985842 342 P20340;A0A024R5J5;P20340-2;A0A024R5H8;Q6FGX3;P20340-4;B7Z5Z9;Q9NRW1;J3KR73;Q9NRW1-2;C9JU14 RAB6A;RAB6B Ras-related protein Rab-6A;Ras-related protein Rab-6B yes no 0 0 0 2 0 1 63.018 63.027 3 0.090801 19968 20230619_1881_Aki_TMTPro18x_K_F2 36.417 19.391 27193 24482 33974 33248 34808 41154 33512 33788 41119 32526 31793 27572 34236 28443 29948 34669 32707 35543 25212 22477 33957 32952 36069 40831 34107 34989 41075 32818 33134 28270 34661 29653 30708 34773 31287 33739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194000000 11067 342 10467 21133 16947 16947 1 9606 Homo sapiens 0.06730568522698377 GSEEELADIK Unmodified 1089.519 0.51898391 50 Q8WXX5;A0A024QZN2 DNAJC9;hCG_2024613 DnaJ homolog subfamily C member 9 yes no 0 0 0 1.5 0.5 2 2 48.559 48.592 2;3 4.4607E-05 13781 20230619_1880_Aki_TMTPro18x_K_F1 161.76 90.542 367700 286910 322090 312010 348780 393510 363310 361660 411990 393070 446880 416670 426660 324510 373280 442520 451620 381870 339550 262960 331330 314260 360780 391080 367060 372450 418260 396280 455700 419010 433340 344070 385200 439220 430870 363600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 443190000 11068 50 10468 21134;21135;21136;21137 16948;16949 16948 2 9606 Homo sapiens -0.022194825897258852 GSEENLDEAR Unmodified 1118.484 0.48399538 1741 P35611-3;E7EV99;P35611;P35611-4;P35611-6;P35611-2;A0A804HL01;E7ENY0;H0Y9H2;Q16155;H0YG19 ADD1;ADDA Alpha-adducin yes no 0 0 0 1 0 1 32.997 32.997 2 4.8322999999999995E-19 7162 20230619_1880_Aki_TMTPro18x_K_F1 246.87 163.87 66046 34629 86659 91819 111520 132340 65776 81584 80129 65874 117550 145460 109250 113680 100710 45584 140780 147390 61092 32205 86698 88382 112700 129440 69553 86448 82237 69887 118650 142770 111510 114720 104440 52795 134360 138890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78334000 11069 1741 10469 21138 16950 16950 1 9606 Homo sapiens -0.07050725397675706 GSEGKPSLTLPASAPGPEEALTTVTVAPAPR Unmodified 3000.5768 0.57678014 1307 P48634;A0A1U9X982;A0A1U9X9A9;A0A1U9X999;A0A1U9X998;A0A1U9X993;A0A1U9X988;A0A1U9X996;A0A1U9X985;A0A1U9X977;A0A1U9X975;A0A1U9X974;A0A1U9X9A5;A0A1U9X987;A0A1U9X972;P48634-3;P48634-2;B4DLY2 PRRC2A Protein PRRC2A yes no 0 0 1 8 0 2 59.425 59.467 3;4 0.00099964 17619 20230619_1888_Aki_TMTPro18x_K_F8 68.516 59.896 12579 8525.5 12569 11888 10030 11418 11241 12162 13687 11362 12924 16669 12088 10171 13232 14897 16391 16934 11619 7838.3 12725 11725 10658 11595 11349 12355 13765 11684 13288 16453 12423 10954 13618 15001 15656 16061 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32377000 11070 1307 10470 21139;21140 16951;16952 16952 2 9606 Homo sapiens 0.15651482333487365 GSELEITLTR Unmodified 1117.5979 0.59790293 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;Q6P0M4;B4DVX2;Q7L4K8;Q9P1N9 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 4 0 1 50.38 50.412 2 0.00031777 14170 20230619_1883_Aki_TMTPro18x_K_F4 137.95 90.872 369760 323190 331040 365700 292860 351160 351940 339490 365800 437240 461390 469140 470710 396870 462930 486120 479870 544090 341760 296200 339160 365720 309080 355990 352020 350380 375950 437470 469430 472340 479670 416590 471960 490240 459420 515930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86322000 11071 1736 10471 21141 16953 16953 1 9606 Homo sapiens 0.043807894352084986 GSELPVLER Unmodified 998.53966 0.53965977 4455 Q9BW92;U3KQG0;Q9BW92-2 TARS2 Threonine--tRNA ligase, mitochondrial yes no 0 0 0 3 0 1 46.887 46.966 2 0.041606 12753 20230619_1882_Aki_TMTPro18x_K_F3 66.273 45.119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11072 4455 10472 21142 16954 16954 1 9606 Homo sapiens 0.04033152580609567 GSELQNYFTK Unmodified 1185.5666 0.5666028 3692 P61221;D6R9I9;D6RGF4;H0Y990 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 0 0 5.33 3.09 1 1 1 54.368 54.413 2;3 1.783E-09 15438 20230619_1888_Aki_TMTPro18x_K_F8 203.78 146.49 348710 311740 343040 356590 362980 405510 402080 383210 430410 429230 411550 395480 447760 359330 395850 478840 419570 442400 322590 285710 349350 357160 376520 405900 404000 394260 436300 430330 424630 401960 453240 378270 405220 476980 401370 420500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 179470000 11073 3692 10473 21143;21144;21145 16955;16956;16957 16957 3 9606 Homo sapiens -0.018757835988708393 GSELQTQAK Unmodified 960.48762 0.4876242 2789 CON__P81644 yes yes 0 0 0 4 0 1 37.149 37.193 2 3.3653E-07 8402 20230619_1883_Aki_TMTPro18x_K_F4 173.39 108.59 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11074 2789 10474 21146 16958 16958 1 0.005799891668516466 GSELSER Unmodified 776.36645 0.36644643 3612 Q9BPX4;Q53XC2;P49770;G3V5E5 EIF2B2 Translation initiation factor eIF-2B subunit beta yes no 0 0 0 1 0 1 29.924 29.924 2 0.076663 5967 20230619_1880_Aki_TMTPro18x_K_F1 74.184 15.365 20657 9789.3 28258 27222 48138 41132 26511 37550 30091 21322 34585 44731 22944 24100 36354 13959 42688 39380 19109 9119 28342 26206 47739 40443 28139 38144 30605 23117 34855 43587 24462 25002 36952 15686 40759 37146 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12546000 11075 3612 10475 21147 16959 16959 1 9606 Homo sapiens -0.030682134757967106 GSETDSAQDQPVK Unmodified 1360.6107 0.61065246 1670 P30419;A0A7I2V539;Q96HI4;A0A7I2V3X4;A0A7I2V3U5;A0A7I2V4Y5;B7Z8J4;K7EN42;Q9Y465;A0A7I2V3M5 NMT1;NMT Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase yes no 0 0 0 1.5 0.5 1 1 36.418 36.447 3 5.1954E-08 8269 20230619_1881_Aki_TMTPro18x_K_F2 157.03 143.01 23209 14765 24739 25348 36654 39889 30460 36906 36797 26977 39392 50981 36363 35532 35841 21062 50354 46285 21442 13614 25186 24902 36964 39139 31282 37622 37188 28529 40241 50072 37227 36395 37167 22864 48010 43709 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35702000 11076 1670 10476 21148;21149 16960 16960 1 9606 Homo sapiens -0.05522843963217383 GSFEEIYK Unmodified 971.46001 0.46001246 2927 E9PK85;P62070-2;P62070-3;P62070;P62070-4;E9PQ87 RRAS2 Ras-related protein R-Ras2 yes no 0 0 0 4.5 0.5 1 1 51.054 51.107 2 0.0045058 14478 20230619_1883_Aki_TMTPro18x_K_F4 116.25 57.61 103070 81534 88775 109430 99334 104680 113750 109950 113010 136940 152560 139990 158830 123570 123610 177580 167730 156210 95177 74881 91657 108120 102700 106340 113850 112710 116830 136980 154820 141560 160170 130880 129040 176210 159970 148640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77751000 11077 2927 10477 21150;21151 16961 16961 1 9606 Homo sapiens -0.026859140933765957 GSFGELALMYNTPR Oxidation (M) 1570.745 0.74497787 424;216 A0A0S2Z472;A8KAH7;A0A024R2W3;P13861-2;P13861;H7C1L0;B3KY43;Q6DHZ2;A0A024R712;P31323;Q75MP1 PRKAR2A;PRKAR2B cAMP-dependent protein kinase type II-alpha regulatory subunit;cAMP-dependent protein kinase type II-beta regulatory subunit no no 0 1 0 1 0 1 56.493 56.493 3 1.5212E-07 17053 20230619_1880_Aki_TMTPro18x_K_F1 141.88 111.33 22660 20818 23321 24470 29397 28238 27701 25089 28644 32160 31546 29597 30718 26684 31283 33597 26987 36232 20974 19083 23729 24463 29969 28214 28056 26042 29271 32043 32187 30069 31399 27994 31581 33790 25926 34352 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37745000 11078 216;424 10478 21152 16962 16962 130 1 9606 Homo sapiens -0.017564817421316548 GSFGELALMYNTPR Unmodified 1554.7501 0.75006325 424;216 A0A0S2Z472;A8KAH7;A0A024R2W3;P13861-2;P13861;H7C1L0;B3KY43;Q6DHZ2;A0A024R712;P31323;Q75MP1 PRKAR2A;PRKAR2B cAMP-dependent protein kinase type II-alpha regulatory subunit;cAMP-dependent protein kinase type II-beta regulatory subunit no no 0 0 0 2 0 1 61.349 61.36 3 9.7547E-09 19197 20230619_1881_Aki_TMTPro18x_K_F2 154.86 139.71 36461 40403 37106 49295 41313 40737 48641 43995 57448 54421 62331 62391 44531 53877 44476 66082 59743 60889 33794 37028 37778 48930 42740 41941 48875 45037 58183 54689 62936 62703 46138 56410 46195 65859 57022 57883 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162960000 11079 216;424 10478 21153 16963 16963 1 9606 Homo sapiens -0.005121778795228238 GSFINISQMIACVGQQAISGSR Unmodified 2323.1413 0.14128464 1838 A0A8V8TNL6;A0A8V8TNX3;B7Z6H4;O14802;Q8TCW3 POLR3A DNA-directed RNA polymerase;DNA-directed RNA polymerase III subunit RPC1 yes no 0 0 0 8 0 1 65.861 65.88 3 0.0020158 20326 20230619_1888_Aki_TMTPro18x_K_F8 68.762 50.961 5401 2433.3 3089.8 3872.4 3604.8 4197.7 3524.3 3400.6 4094.2 3013.7 4093.4 4193.6 2868.9 4520.4 3551.5 3467.6 4275.1 6121.7 4962.4 2245.9 3342.8 3793.2 3710.5 4199.2 3575.8 3521.2 4132.6 3106.4 4148 4214.9 3014.5 4590.7 3639.7 3650.3 4096.2 5779.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6671400 11080 1838 10479 21154 16964 16964 1 9606 Homo sapiens 0.0326396524642405 GSFQVTR Unmodified 793.40825 0.40825167 1097 P51659;A0A0S2Z4J1;B2R659;E7EPL9;A0A804HK65;A0A2R8YD50;P51659-2;P51659-3;B4DSD0;A0A804HKU2;E7ER27;A0A2R8YF45;A0A2R8YDT8 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 0 0 0 7.5 0.5 1 1 36.729 36.757 2 0.0095486 8178 20230619_1888_Aki_TMTPro18x_K_F8 119.17 56.456 186820 134840 169590 160210 166810 197740 171900 175550 261770 187350 221030 221880 229750 197940 198640 207820 303830 249240 172490 123730 173600 160250 173960 196580 175820 181180 259680 189960 229020 222880 232900 205530 208350 210990 289310 236490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104230000 11081 1097 10480 21155;21156 16965;16966 16966 2 9606 Homo sapiens 0.003283870033897074 GSFSDTGLGDGK Unmodified 1139.5095 0.50948185 1525 A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 0 0 0 4 0.816 1 1 1 47.15 47.216 2 1.7975E-23 12682 20230619_1883_Aki_TMTPro18x_K_F4 242.97 204.88 273100 223990 224500 272600 305540 340120 317450 311980 364090 338870 375740 386380 407710 329100 321100 416410 402710 347660 252160 205480 233650 272120 311460 338160 320730 321360 368710 342540 386340 388250 410920 345890 333050 412970 384140 331140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160390000 11082 1525 10481 21157;21158;21159 16967 16967 1 9606 Homo sapiens -0.05469250875239595 GSFSEQGINEFLR Unmodified 1482.7103 0.71030693 1478 A0A384NPU5;Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 0 5.71 1.03 1 2 2 2 58.48 58.529 2;3 2.6173E-46 17202 20230619_1887_Aki_TMTPro18x_K_F7 280.17 247.65 245750 177740 211430 225320 202820 259400 250800 261060 266110 289230 276900 301430 293240 242100 284540 344480 318640 333230 226810 163200 217650 224100 212990 259650 250630 267270 270820 291060 284530 303450 298340 257110 291710 343700 304640 316570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4085699999.9999995 11083 1478 10482 21160;21161;21162;21163;21164;21165;21166 16968;16969;16970;16971 16970 4 9606 Homo sapiens -0.011739815585769975 GSFSGQAQPLR Unmodified 1146.5782 0.57817054 200 B9A6K1;A0A024R2J9;A0A024R2H0;Q92609;Q92609-2 TBC1D5 TBC1 domain family member 5 yes no 0 0 0 4.5 3.5 1 1 39.176 39.169 2 9.9371E-05 9724 20230619_1880_Aki_TMTPro18x_K_F1 137.98 77.54 72021 55481 65651 63453 99693 111750 63324 57473 76396 48242 50048 44645 47152 40544 62740 55067 65161 47166 66523 50877 67698 64023 99945 108100 66352 62223 76011 49258 52464 45397 48984 42715 63607 54690 62198 44948 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51063000 11084 200 10483 21167;21168 16972;16973 16972 2 9606 Homo sapiens 0.010744582151119175 GSFSQADVHR Unmodified 1102.5156 0.51557028 884 Q04206;A0A087X0W8;Q04206-3;Q04206-2;B4E082;E9PKH5;Q2TAM5;Q04206-4 RELA Transcription factor p65 yes no 0 0 0 4.5 0.5 1 1 32.351 32.421 3 0.00010933 6571 20230619_1885_Aki_TMTPro18x_K_F5 111.86 93.075 19517 18271 17463 18130 23591 26904 22217 22844 23629 24752 26235 22442 27843 20196 28130 26196 25944 23133 18047 16723 18008 18444 23993 26453 22526 23655 24109 24843 26845 22830 28350 21238 28467 26066 24825 22015 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37593000 11085 884 10484 21169;21170 16974 16974 1 9606 Homo sapiens -0.03158687853056108 GSGCIEPASGR Unmodified 1089.4873 0.48730662 2007 D3DVA4;A8K1I7;Q7Z7F0-3;Q7Z7F0-2;Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 yes no 0 0 0 3 0 1 31.642 31.721 2 0.0041218 6253 20230619_1882_Aki_TMTPro18x_K_F3 89.247 81.307 10242 4664.5 10827 10243 15243 16464 13454 13716 13170 10424 17741 18381 14650 13064 15337 10224 17147 16483 9449 4325.9 11013 9956.9 15428 16101 13665 14112 13595 10954 17858 18113 15085 13501 15654 10689 16384 15591 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8729400 11086 2007 10485 21171 16975 16975 1 9606 Homo sapiens -0.05385753824657513 GSGEQDWVNRPK Unmodified 1371.6531 0.6531264 4175 Q7Z5L9-2;Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes no 0 0 1 5.5 0.5 1 1 39.104 39.191 3 1.7849E-05 9190 20230619_1886_Aki_TMTPro18x_K_F6 131.79 108.56 175370 125940 147960 156310 115960 146110 165690 163230 179800 196080 208250 187530 216280 188460 179390 205880 212170 186500 161830 115620 152180 155270 124520 148880 164660 166470 183540 196120 212500 190870 218760 195250 185010 205480 202510 177440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 291610000 11087 4175 10486 21172;21173 16976 16976 1 9606 Homo sapiens -0.017834040442949117 GSGGFGSTGKN Unmodified 967.43592 0.43592298 3541 P33316-2;H0YNW5;P33316;A0A0C4DGL3 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes no 0 0 1 7.5 0.5 1 1 37.259 37.285 2 6.8195E-13 8372 20230619_1888_Aki_TMTPro18x_K_F8 217.63 190.96 88436 37191 120020 115310 145140 154380 104260 141890 96481 78962 147350 158400 103690 114950 133800 33872 158680 122420 81768 34762 119610 110390 147520 152680 107470 144050 100610 85543 147000 155560 108810 115660 136320 40661 151330 115470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71688000 11088 3541 10487 21174;21175 16977 16977 1 9606 Homo sapiens -0.04909754527045607 GSGGGGGGGGQGSTNYGK Unmodified 1453.6182 0.61819745 4406 Q99729-3;Q99729-4 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 6.5 0.5 1 1 33.388 33.45 3 1.5061E-18 7059 20230619_1886_Aki_TMTPro18x_K_F6 136.26 126.13 14996 9981 18217 21044 29477 30961 18149 28798 21131 16612 27149 30156 20651 25274 29167 10954 33292 33520 13875 9230.4 18417 20446 29408 30481 19085 29211 21577 17851 27323 29807 21741 25467 29633 12562 31815 31597 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26640000 11089 4406 10488 21176;21177 16978;16979 16978 2 9606 Homo sapiens -0.09046691642879523 GSGGGGPASASGPAASESRPLPR Unmodified 2021.9879 0.98787877 328 A0A024R5A7;A8K0D4;Q9Y6J9 TAF6L TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L yes no 0 0 1 7 0 1 33.686 33.768 3 5.5299E-53 6795 20230619_1887_Aki_TMTPro18x_K_F7 250.28 227.48 18488 16271 16117 20268 23444 25686 26086 21143 25286 21832 19877 21702 21214 20938 22612 26936 27421 26991 17085 14926 16711 20200 23837 25458 26097 21945 25590 22037 20731 22016 21706 21928 23258 26961 26187 25638 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 25258000 11090 328 10489 21178 16980;16981 16980 2 9606 Homo sapiens 0.017764345165915074 GSGIFDESTPVQTR Unmodified 1492.7158 0.71578623 1969 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2;H3BMV3;H3BMT0;H3BTV5;B4DL85 HN1L Hematological and neurological expressed 1-like protein yes no 0 0 0 3.5 0.5 1 1 47.538 47.599 2 2.1730999999999997E-28 12858 20230619_1883_Aki_TMTPro18x_K_F4 253.76 248.45 270830 229240 257170 249710 209360 246620 262560 256870 287010 347020 347090 303100 355430 313490 294350 387410 354070 351650 250380 210040 261620 250630 222830 249930 262550 264110 293650 344480 353290 310260 359670 326890 304200 385850 338180 334390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 257060000 11091 1969 10490 21179;21180 16982;16983 16983 2 9606 Homo sapiens -0.010863027667937786 GSGNLEAIHIIK Unmodified 1250.6983 0.69828568 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 5.33 3.09 1 1 1 49.269 49.321 3 1.2953E-05 13221 20230619_1888_Aki_TMTPro18x_K_F8 125.84 71.14 2055600 1657300 1807000 2210000 1823500 2062600 1971700 2064500 2242700 2417100 2367400 2310900 2784400 2265200 2382100 2945600 2464800 2582200 1898700 1521900 1858900 2183800 1898100 2096700 1988500 2118600 2276100 2420600 2440800 2350500 2808600 2374100 2437100 2927200 2358300 2456000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7288299999.999999 11092 3756 10491 21181;21182;21183 16984;16985 16985 2 9606 Homo sapiens 0.08296446488884612 GSGPPPTEEEEGER Unmodified 1469.627 0.62703081 3190 M0QY97;Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 0 0 0 1 0 1 31.696 31.696 2 1.0292E-15 6642 20230619_1880_Aki_TMTPro18x_K_F1 194.96 175.2 11679 4471.9 10117 13916 20034 17966 11532 13401 18166 10319 18313 17102 17538 18519 14073 7619.2 19739 19466 10752 4183.1 10571 13300 19783 17746 12328 13924 18108 10826 18732 17097 17787 18479 14646 8520.2 18830 18364 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19495000 11093 3190 10492 21184 16986 16986 1 9606 Homo sapiens -0.08899762797113908 GSGSQSSVPSVDQFTGVGIR Unmodified 1963.9599 0.95993268 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 8 0 1 54.132 54.203 2 1.1157000000000001E-29 15384 20230619_1888_Aki_TMTPro18x_K_F8 276.75 242.54 24615 20111 22404 24975 19755 22868 24024 25261 25244 30070 30201 27544 29969 26559 24304 32830 28823 31770 22743 18452 22919 24798 20856 23339 24027 25768 25865 30043 30718 28058 30332 27758 25112 32806 27554 30176 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121780000 11094 4191 10493 21185 16987 16987 1 9606 Homo sapiens 0.016511115364892248 GSGSRPGIEGDTPR Unmodified 1384.6695 0.66950474 1217 Q6DEN2;A0A140VK07;Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 1 3.5 0.5 1 1 29.51 29.597 3 5.8654E-07 5389 20230619_1883_Aki_TMTPro18x_K_F4 134.06 99.303 47797 36889 45546 44987 55126 56856 42868 43239 61184 61596 60811 50291 70882 50872 49116 69771 68060 54684 44163 33848 46578 44918 56186 56300 44516 45592 61327 60954 62744 51640 70941 53489 51481 68906 64844 52148 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 680160000 11095 1217 10494 21186;21187 16988;16989 16989 2 9606 Homo sapiens -0.007443228781994549 GSGTAEVELK Unmodified 989.50294 0.50293991 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;A0A024R609;H3BQ34;H3BUW1;H3BTJ2;H3BT25;V9HWB8;P14618;A0A8V8TNX9;P14618-3 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 3.5 0.5 1 1 43.305 43.362 2 3.0051E-05 11049 20230619_1882_Aki_TMTPro18x_K_F3 179.81 127.23 300210 165940 254350 273020 365700 387570 328880 335610 431750 363590 437220 486380 472360 432970 370180 335970 534380 510620 276680 153030 263970 268220 370220 381880 336850 347120 434060 369910 450060 485980 476470 443310 387040 349130 509540 483230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1258600000 11096 370;3451 10495 21188;21189 16990 16990 1 9606 Homo sapiens 0.007768559640453532 GSGTAEVELKK Unmodified 1117.5979 0.59790293 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;A0A024R609;H3BQ34;H3BUW1;H3BTJ2;H3BT25;V9HWB8;P14618;A0A8V8TNX9;P14618-3 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 1 6.2 1.17 2 1 1 1 42.042 42.106 3 0.00020296 10339 20230619_1886_Aki_TMTPro18x_K_F6 113.38 89.087 1442900 743180 1280300 1266300 2107600 1839300 1610400 1680200 1910800 1713200 2083200 1927600 2201400 1706800 2030000 1231400 2066000 1499700 1329800 685970 1325700 1242600 2107300 1813200 1661900 1727500 1936500 1736600 2133400 1938700 2233300 1743800 2064400 1263300 1972500 1423700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6443599999.999999 11097 370;3451 10496 21190;21191;21192;21193;21194 16991;16992 16992 2 9606 Homo sapiens 0.04380789435231236 GSGTASDDEFENLR Unmodified 1496.6379 0.63792984 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 1 0 1 44.419 44.419 2 3.6277E-57 12039 20230619_1880_Aki_TMTPro18x_K_F1 326.41 295.61 99281 80914 85485 86521 74890 91925 90451 88570 96424 121910 121630 130700 131880 112370 113770 136090 132940 134170 91694 74139 87841 87035 79150 92488 90528 91614 99016 121640 124110 131630 133410 117760 117190 136210 127020 127450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126160000 11098 594 10497 21195 16993 16993 1 9606 Homo sapiens -0.09052360422811034 GSIDEVDK Unmodified 861.40798 0.40797689 179 Q53GN6;A0A024R201;Q9UNM6;J3KNQ3;B2RBM7;Q9Y6E3;Q9UNM6-2;B4DJ66;Q9UNM7 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 2 0 1 41.807 41.884 2 0.0051745 10665 20230619_1881_Aki_TMTPro18x_K_F2 114.28 90.724 54086 23203 61874 68181 79934 123100 67515 96206 104950 72245 113600 150660 111470 112890 71816 59042 154360 145550 49923 21656 62556 65748 81600 119480 70025 99410 104980 76737 116220 147890 112150 114840 78188 65099 146840 137360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43182000 11099 179 10498 21196 16994 16994 1 9606 Homo sapiens -0.028270775071405296 GSIDEVDKR Unmodified 1017.5091 0.50908792 179 Q53GN6;A0A024R201;Q9UNM6;J3KNQ3;B2RBM7;Q9Y6E3;Q9UNM6-2;B4DJ66;Q9UNM7 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 1 3 0 1 36.651 36.705 3 0.0040291 8250 20230619_1882_Aki_TMTPro18x_K_F3 80.986 47.724 168280 137900 240360 204920 338730 212790 289330 228670 182610 173470 223880 105010 156860 106590 344990 78684 117110 101690 156160 126780 239260 201590 340920 215310 291250 231190 193710 176140 224480 110080 170660 108670 333440 81689 114140 96400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99406000 11100 179 10499 21197 16995 16995 1 9606 Homo sapiens 0.0010337419556663008 GSIDQSVLK Unmodified 945.51311 0.51311067 1568 A0A590UJS4;Q6IEH8;Q6KC79-2;Q6KC79;A8K2T2;A6QL62;Q6KC79-3 NIPBL Nipped-B-like protein yes no 0 0 0 6 0 1 47.023 47.105 2 0.03039 12625 20230619_1886_Aki_TMTPro18x_K_F6 74.165 34.062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11101 1568 10500 21198 16996 16996 1 9606 Homo sapiens 0.038174636892904346 GSIFVVFDSIESAK Unmodified 1497.7715 0.7715102 2662 B5BUB5;P05455;E7ERC4;Q14730;E9PGX9 SSB Lupus La protein yes no 0 0 0 8 0 1 64.869 64.889 3 4.6662E-07 19895 20230619_1888_Aki_TMTPro18x_K_F8 136.3 110.65 241100 131020 216010 241890 201660 297010 279470 169750 390380 282470 218430 297520 247960 331340 353700 321640 296940 411830 222280 121040 221600 235550 213520 292900 280230 185620 384340 280490 234290 302140 258060 339780 354540 328530 285460 389790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227980000 11102 2662 10501 21199 16997 16997 1 9606 Homo sapiens 0.042535304208740854 GSIIISPCVVCR Unmodified 1359.7003 0.70027629 2347 B3KM81;Q59E88;Q53G26;Q96EY1-2;Q96EY1;Q96EY1-3 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes no 0 0 0 3.5 0.5 1 1 52.806 52.847 2 1.4251E-06 15421 20230619_1882_Aki_TMTPro18x_K_F3 155.06 112.72 129560 101510 109990 126870 125050 139630 134930 131640 153400 120170 117670 110660 116220 100990 132680 115050 123490 117590 119620 93163 113700 126190 129040 140030 136010 134750 153720 121840 122360 112470 119460 105250 134020 115600 118200 111680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88602000 11103 2347 10502 21200;21201 16998;16999 16998 2 9606 Homo sapiens 0.03481415910846408 GSIPEFFHIMK Unmodified 1304.6587 0.65872905 4586 Q9NRN7;E9PLW6;E9PNF3 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes no 0 0 0 4.67 1.25 1 1 1 61.017 61.061 3 2.9844E-06 18783 20230619_1882_Aki_TMTPro18x_K_F3 146.16 110.2 226820 196400 231340 226630 164740 218950 224270 233710 223630 257590 259340 251680 277930 231570 234180 280600 275300 292780 209840 180030 233630 226400 178210 222280 222840 238370 229420 258760 265150 255150 280970 242200 241430 281730 263130 277890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252360000 11104 4586 10503 21202;21203;21204 17000;17001 17000 2 9606 Homo sapiens 0.018586032138045994 GSITISAEEIK Unmodified 1146.6132 0.61321864 561 O75131;A0A024R994;Q05DL8;A0A087WYQ3;H0YB26;A0A087WXR6;E5RHZ0 CPNE3 Copine-3 yes no 0 0 0 5 0 1 51.859 51.933 2 1.3395E-16 14633 20230619_1885_Aki_TMTPro18x_K_F5 246.59 200.46 68060 59337 67111 73511 60876 71683 76117 79588 80996 76372 87244 97592 90501 80054 85183 93920 107310 109930 62952 54430 68208 73061 64163 72794 76043 80686 82459 77983 89441 97509 92055 83885 87980 95025 102470 104230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47767000 11105 561 10504 21205 17002 17002 1 9606 Homo sapiens 0.04577656232413574 GSLDYRPLTTADPIDEHR Unmodified 2055.0021 0.0021318501 1621 B0AZS5;A0A6Q8PFA6;A0A6Q8PH57;O00139-2;A0A6Q8PGH7;A0A6Q8PG37;B4DM85;O00139-1;O00139-5;O00139;O00139-4;A0A6Q8PGG1;D6R9M0 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 1 4.5 0.5 1 1 46.01 46.07 4 3.6769E-18 12185 20230619_1883_Aki_TMTPro18x_K_F4 171.21 157.78 155370 132410 150290 158850 142730 171880 166040 158590 193410 181130 171300 159220 170510 139020 167640 190250 180220 154620 143660 121430 153050 158440 149630 172500 166910 163550 194610 181220 176700 162000 173890 146770 171330 188310 172140 147330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123410000 11106 1621 10505 21206;21207 17003;17004 17004 2 9606 Homo sapiens 0.01683086944876777 GSLELCDFVTASSFCR Unmodified 1847.8182 0.81821917 4601 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 yes yes 0 0 0 8 0 1 62.652 62.677 2 6.0801E-06 18924 20230619_1888_Aki_TMTPro18x_K_F8 141.38 108.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11107 4601 10506 21208 17005 17005 1 9606 Homo sapiens -0.07177721081802702 GSLESPATDVFGSTEEGEK Unmodified 1938.8694 0.86944592 1088 A0A0S2Z489;O00232-2;O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 2 0.816 1 1 1 55.583 55.604 3 7.147E-20 16777 20230619_1881_Aki_TMTPro18x_K_F2 186.75 167.19 280510 231000 243760 303650 269160 304420 280390 320390 349960 360320 390510 391230 397000 361790 292790 437040 448970 470530 259110 212070 251420 300610 278130 308090 284350 327190 354270 362910 398880 394900 400340 378090 308990 439390 428210 446470 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 676410000 11108 1088 10507 21209;21210;21211 17006;17007;17008;17009 17007 4 9606 Homo sapiens -0.06243402302425238 GSLFFNPK Unmodified 908.4756 0.47560295 2783 CON__P17697 yes yes 0 0 0 4 0 1 55.728 55.736 3 0.08 16532 20230619_1883_Aki_TMTPro18x_K_F4 48.283 27.954 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11109 2783 10508 21212 17010 17010 1 0.017704172143339747 GSLGEERNPTSK Unmodified 1273.6262 0.62624295 2903 E7EVG2;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-9;Q86U86-2;Q86U86-8;Q86U86;H0Y5B5;Q86U86-6 PBRM1 Protein polybromo-1 yes no 0 0 1 5 0 1 34.742 34.83 3 0.061925 7494 20230619_1885_Aki_TMTPro18x_K_F5 46.159 30.719 15912 10056 18904 20234 24069 22973 20469 20234 19619 19380 25436 22984 21122 18165 26418 12058 25935 22577 14716 9294.4 19035 19612 24452 22952 20831 20842 20262 19739 25631 22993 21941 18589 26661 12853 24796 21344 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16887000 11110 2903 10509 21213 17011 17011 1 9606 Homo sapiens 0.0003748734452528879 GSLGGGFSSGGFSGGSFSR Unmodified 1706.7649 0.76486169 1272 P13645;CON__P13645;A0A1B0GVI3 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 3.67 0.471 1 2 53.08 53.113 2;3 8.3044E-11 15540 20230619_1882_Aki_TMTPro18x_K_F3 105.28 101.84 + 52668 48406 63972 63078 387410 76534 88128 72091 101350 66598 67481 72916 74030 107020 79478 72231 81936 80141 48824 44418 68377 62673 366010 77257 106490 73850 101530 67934 71189 74874 75928 107240 80814 73652 78359 76041 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 414370000 11111 1272 10510 21214;21215;21216 17012;17013 17012 2 9606 Homo sapiens -0.06025014477813784 GSLITSLLR Unmodified 958.58113 0.58113065 3992 Q53FA7;B4DMQ7 TP53I3 Quinone oxidoreductase PIG3 yes no 0 0 0 5 0 1 60.471 60.522 2 0.0064073 18126 20230619_1885_Aki_TMTPro18x_K_F5 104.2 64.24 145860 107550 108100 128020 146510 143940 135230 125890 116900 95289 97436 86976 79498 81976 122210 89010 93477 78870 134500 98681 113620 127800 148730 143990 136410 129090 119320 97728 100150 88558 83815 85023 121750 88895 89615 75072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14631000 11112 3992 10511 21217 17014 17014 1 9606 Homo sapiens 0.10018333339951369 GSLLDFLK Unmodified 891.50657 0.50656873 2023;3404;3443 A8K379;P07948;B4DQ79;A8K4G3;H0Y3C5;J3KPD6;P08631-3;P08631-2;P08631-4;P08631;Q6NUK7;P07948-2;P12931;P12931-2;P12931-3;Q9H7V3;B3KPS6;B2RA70;J3QRU1;P06241-3;P06241-2;P06241;P07947 LYN;HCK;SRC;YES1;FYN Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lyn;Tyrosine-protein kinase HCK;Proto-oncogene tyrosine-protein kinase Src;Tyrosine-protein kinase Fyn;Tyrosine-protein kinase Yes no no 0 0 0 2.5 0.5 1 1 63.626 63.646 2 0.0069758 20230 20230619_1881_Aki_TMTPro18x_K_F2 117.04 50.354 279790 255500 253000 283230 262410 340740 236980 242950 290750 97282 101620 69472 71794 60449 190860 76791 86976 58217 258700 234090 259560 284470 271720 337870 242080 251150 285010 105720 111890 71708 79874 63517 185610 76246 84024 55597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198420000 11113 2023;3404;3443 10512 21218;21219 17015 17015 1 9606 Homo sapiens 0.05647570528572032 GSLLFTAGPLEEER Unmodified 1517.7726 0.77257283 1174 P53004;A0A140VJF4 BLVRA Biliverdin reductase A yes no 0 0 0 3 0 1 60.237 60.266 3 2.7888E-08 18507 20230619_1882_Aki_TMTPro18x_K_F3 145.41 100.79 18041 17206 19394 22977 19048 21184 21822 24814 27427 21850 24440 23220 23767 21810 21364 28820 24925 25375 16710 15790 19606 22704 19891 21636 22023 25016 27483 22289 25175 23487 24181 22901 22005 28634 23817 24136 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53994000 11114 1174 10513 21220 17016 17016 1 9606 Homo sapiens 0.034397447897617894 GSLLIDSSTIDPAVSK Unmodified 1601.8512 0.85121708 611 P31937;A0A024RA75;H7BZL2 HIBADH 3-hydroxyisobutyrate dehydrogenase, mitochondrial;3-hydroxyisobutyrate dehydrogenase yes no 0 0 0 6.5 0.5 1 1 59.812 59.866 3 6.2524E-11 18078 20230619_1886_Aki_TMTPro18x_K_F6 146 128.51 26778 27844 28988 34109 41237 51340 42979 42304 49757 31873 45204 49029 44275 40713 47337 51028 50009 59310 24820 25523 29495 34142 41954 50377 43422 43562 50044 33331 46592 48748 45390 42800 48254 51561 47887 56211 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118670000 11115 611 10514 21221;21222 17017 17017 1 9606 Homo sapiens 0.07436552304170618 GSLNTYR Unmodified 809.40317 0.40316629 367 H0YK39;B2R506;A0A024R5Z5;P52657 GTF2A2 Transcription initiation factor IIA subunit 2 yes no 0 0 0 7 0.816 1 1 1 34.056 34.097 2 0.011243 6929 20230619_1887_Aki_TMTPro18x_K_F7 116.9 57.698 115120 72066 125430 136950 172160 192870 146080 163270 194890 76539 94375 84562 84915 84145 136030 59359 113920 83677 106370 66554 127330 133560 174510 189950 150270 166460 191390 82499 101190 85530 89509 85486 135760 61678 109000 79330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 64597000 11116 367 10515 21223;21224;21225 17018;17019 17018 2 9606 Homo sapiens -0.00915916859241861 GSLPANVPTPR Unmodified 1107.6037 0.60365701 2592 B4DUD5;P33240-2;P33240;E9PID8;E7EWR4;B3V096 CSTF2 Cleavage stimulation factor subunit 2 yes no 0 0 0 1 0 1 43.094 43.094 2 0.001731 11456 20230619_1880_Aki_TMTPro18x_K_F1 95.822 67.618 171290 127720 143160 166870 198350 206120 183230 184550 257330 128400 168910 185850 173460 159550 169050 156710 204750 201030 158080 117290 148720 165760 201370 204950 187800 188560 253980 134800 177770 185190 176850 165270 173870 160060 195530 190490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84973000 11117 2592 10516 21226 17020 17020 1 9606 Homo sapiens 0.05415932737537332 GSLQILDQLLLPK Unmodified 1436.8603 0.86026563 4447 Q9BV20;Q9BV20-2 MRI1 Methylthioribose-1-phosphate isomerase yes no 0 0 0 3 0 1 65.219 65.253 3 6.8075E-05 20642 20230619_1882_Aki_TMTPro18x_K_F3 108.17 89.425 15045 12803 20806 18029 13306 18288 17059 16741 19506 18456 17189 19824 18510 19508 18817 21691 22399 21790 13959 11762 20529 17784 14530 18425 17073 17261 19643 18608 17826 20046 18897 20231 19342 21761 21393 20697 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25609000 11118 4447 10517 21227 17021 17021 1 9606 Homo sapiens 0.15930990451192883 GSLSNAGDPEIVK Unmodified 1285.6514 0.65139506 3269 O43847;O43847-2;Q96L67 NRD1 Nardilysin yes no 0 0 0 4 0 1 47.491 47.533 3 2.4148E-05 12880 20230619_1883_Aki_TMTPro18x_K_F4 104.17 75.369 56772 60174 75066 65629 84794 116030 76734 77965 111180 84920 88137 85079 78474 84205 75055 86205 85883 100820 52732 55096 74849 66495 87285 112580 78901 82417 110320 85571 91055 86338 80375 86946 77048 87386 82171 95554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48435000 11119 3269 10518 21228 17022 17022 1 9606 Homo sapiens 0.019995421470639485 GSLTEGALAHSGNPVSK Unmodified 1623.8216 0.82164829 2848 Q9UPQ0-10;Q9UPQ0;D6RD46;Q9UPQ0-2;Q9UPQ0-4;G5EA03;E9PDJ9;B7Z2J4;E7EPK0;Q9UPQ0-3;Q9UPQ0-8;Q9UPQ0-5;Q9UPQ0-6;H0Y8P3;Q9UPQ0-9;B7Z5Q8;B7Z3F1;B7Z3G0;B7Z656;B7Z7Z0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes no 0 0 0 7.5 0.5 1 1 43.943 43.994 3 0.00038534 11133 20230619_1888_Aki_TMTPro18x_K_F8 73.208 59.546 13917 11055 14034 14728 14112 17185 15327 16704 16747 18718 20461 18768 17524 15286 20977 19077 25146 24104 12867 10152 14254 14602 14697 17173 15437 17145 17133 18803 20686 18938 18150 16092 21488 19394 24012 22844 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87108000 11120 2848 10519 21229;21230 17023 17023 1 9606 Homo sapiens 0.03469033078681605 GSLTGVQTCR Unmodified 1077.5237 0.52369213 4552 Q9HCU0;Q9HCU0-2 CD248 Endosialin yes no 0 0 0 7.5 0.5 1 1 36.089 36.076 2 4.9021E-10 7902 20230619_1888_Aki_TMTPro18x_K_F8 214.54 166.69 81848 62074 81582 65351 56023 57375 81145 77226 93703 81969 76211 77048 105780 74953 77130 94203 129300 101580 75646 56884 82409 65728 60859 59124 80764 77656 94046 82448 80296 78395 105630 78500 81887 94709 123020 96503 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75110000 11121 4552 10520 21231;21232 17024;17025 17025 2 9606 Homo sapiens -0.011968769279292246 GSLVAPDR Unmodified 813.43447 0.43446642 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 4 0 1 36.414 36.46 2 0.004088 8100 20230619_1883_Aki_TMTPro18x_K_F4 105.57 61.121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11122 1637 10521 21233 17026 17026 1 9606 Homo sapiens 0.020286561748548593 GSNLDAPEPYR Unmodified 1217.5677 0.56766543 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;A0A7I2V311;A0A7I2V5F6 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 2.5 0.5 1 1 40.279 40.344 2 4.6426E-07 9762 20230619_1882_Aki_TMTPro18x_K_F3 195.51 165.53 145610 104230 118840 118150 93788 127410 122600 117410 139160 166350 175700 147810 169480 131260 126320 185170 155330 151060 134330 95600 122590 118340 100450 127880 122520 121950 142360 164900 178020 150460 171030 138820 131140 183130 148310 143860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185510000 11123 442 10522 21234;21235 17027 17027 1 9606 Homo sapiens -0.03241569229953711 GSNMDFREPTEEER Oxidation (M) 1711.7108 0.71077721 3913;3914 Q15056;A0A7I2V4E4;A0A7I2V3E4;Q75MT8;A0A7I2V3D5;Q15056-2 EIF4H;WBSCR1 Eukaryotic translation initiation factor 4H no no 0 1 1 1.5 0.5 1 1 33.693 33.721 3 6.3253E-05 7454 20230619_1880_Aki_TMTPro18x_K_F1 105.58 95.661 425580 323800 357040 386570 422580 472260 429700 416220 493520 449030 511020 465570 531530 444090 460260 508350 470310 557330 392830 297070 369560 386350 434230 469780 434800 429970 499740 452740 524020 471450 538330 462340 470140 512410 450490 528510 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1206400000 11124 3913;3914 10523 21236;21237 17028;17029;17030 17028 2592 3 9606 Homo sapiens -0.11660974691676529 GSNMDFREPTEEER Unmodified 1695.7159 0.71586259 3913;3914 Q15056;A0A7I2V4E4;A0A7I2V3E4;Q75MT8;A0A7I2V3D5;Q15056-2 EIF4H;WBSCR1 Eukaryotic translation initiation factor 4H no no 0 0 1 2 0.816 1 1 1 38.293 38.332 3 1.1304E-11 9298 20230619_1880_Aki_TMTPro18x_K_F1 179.94 150.25 300540 235000 274880 277800 261180 307860 292450 299770 343880 349130 359200 349430 414790 334010 312150 428510 397940 370430 277630 215550 281190 277500 273490 308840 294750 308080 348150 350240 370070 354400 416640 350040 324590 425520 379730 352550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1167200000 11125 3913;3914 10523 21238;21239;21240 17031;17032;17033 17031 3 9606 Homo sapiens -0.1041667082904496 GSNSLPLLR Unmodified 955.54508 0.5450795 595 D6RAA6;A6QKW0;A0A024R9W7;P57088;H0Y8N0 TMEM33;SHINC3 Transmembrane protein 33 yes no 0 0 0 2.5 0.5 1 1 47.956 48.031 2 0.0019768 13211 20230619_1882_Aki_TMTPro18x_K_F3 110.76 88.265 565580 399090 493300 587320 558880 657330 660910 596920 761840 690320 710190 755550 739290 596950 675780 841500 804930 798300 521970 367080 508820 578210 578620 657680 663260 616720 768190 694790 732680 758770 750560 633960 696350 838750 768850 758710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 787700000 11126 595 10524 21241;21242 17034;17035;17036 17035 3 9606 Homo sapiens 0.06552876163095789 GSNTCEVHFENTK Unmodified 1521.6518 0.65180577 4531 Q9H845;Q9H9W4;H0Y8Z9;A0A7P0T8U3;A0A7P0T871;A0A7P0T7Z1;A0A7P0TB58;A0A7P0T9N9;Q59FN3 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 0 3.5 0.5 1 1 38.391 38.439 3 5.1127E-11 8883 20230619_1883_Aki_TMTPro18x_K_F4 180.27 158.97 151160 108860 160590 164650 189700 194780 181940 190820 187660 194100 248060 273830 236510 200170 201600 207450 276710 260490 139740 100150 162800 162040 194360 194550 184170 195290 193240 198320 251300 271750 240120 209310 209770 211320 263920 246910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148840000 11127 4531 10525 21243;21244 17037;17038 17038 2 9606 Homo sapiens -0.08815406195367359 GSNTIASAAADK Unmodified 1104.5411 0.54111633 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DS32 CSE1L Exportin-2 yes no 0 0 0 5.25 0.433 3 1 41.387 41.475 2;3 4.0457E-09 10170 20230619_1885_Aki_TMTPro18x_K_F5 196.15 155.16 92475 49823 96701 104480 122970 137060 110330 118340 153520 119700 151780 200800 199290 176590 114160 128400 250590 247060 85359 46122 98323 101330 125380 135580 113330 122230 153810 123470 158090 199110 198040 180510 125160 136400 238420 233410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220840000 11128 1462 10526 21245;21246;21247;21248 17039;17040;17041 17039 3 9606 Homo sapiens -0.0069725812129490805 GSNWVPR Unmodified 814.40859 0.40858602 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C044;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 1 0 1 39.872 39.872 2 0.063275 10026 20230619_1880_Aki_TMTPro18x_K_F1 80.229 35.782 299150 253680 271040 269860 295910 337800 295050 315780 369130 352370 360750 343090 361940 292030 315530 340310 401320 322510 276460 232400 278040 272230 305660 336000 299920 324960 371560 353910 370390 346990 367130 305530 326500 340190 382600 306800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180450000 11129 1676;2901 10527 21249 17042 17042 1 9606 Homo sapiens -0.006041932767743674 GSPCSEEAGTLR Unmodified 1262.5561 0.55611447 1634 F8W7R3;B3KNW8;A0A6Q8PGF4;B7ZMF2;A0A6Q8PH09;Q9NVI1-2;Q9NVI1-1;Q9NVI1;H3BS60;H3BQE2;H3BT54;H3BMG4;Q9NVI1-4 FANCI Fanconi anemia group I protein yes no 0 0 0 2 0 1 34.731 34.788 2 7.1591E-13 7582 20230619_1881_Aki_TMTPro18x_K_F2 208.33 176.91 93621 69818 78623 78875 89395 105590 85451 80299 107790 97559 94484 80559 116290 83343 74340 102180 103630 75565 86406 64025 81279 79266 92031 104170 87068 84234 108050 97227 98368 82707 115920 86922 78088 100820 98671 72157 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63776000 11130 1634 10528 21250 17043;17044 17043 2 9606 Homo sapiens -0.06466134315610361 GSPCSEEAGTLRR Unmodified 1418.6572 0.6572255 1634 F8W7R3;B3KNW8;A0A6Q8PGF4;B7ZMF2;A0A6Q8PH09;Q9NVI1-2;Q9NVI1-1;Q9NVI1;H3BS60;H3BQE2;H3BT54;H3BMG4;Q9NVI1-4 FANCI Fanconi anemia group I protein yes no 0 0 1 3.5 0.5 1 1 30.749 30.824 3 2.7154E-06 5870 20230619_1883_Aki_TMTPro18x_K_F4 136.7 98.395 13266 12421 13846 16773 18921 16769 16395 16926 16615 15918 14583 15930 15476 12913 13594 20876 18189 13618 12282 11402 14106 16575 19147 16969 16685 17256 16845 16138 15107 16077 15683 13829 14149 20423 17327 13028 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22375000 11131 1634 10529 21251;21252 17045 17045 1 9606 Homo sapiens -0.0353568261291457 GSPDGSLQTGKPSAPK Unmodified 1525.7736 0.77363546 2064 A8K548;Q8IZL8;C9JFV4;B4DR36;E7EV54;B4DEX7;O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 0 0 1 8 0 1 40.764 40.757 3 5.1993E-11 9793 20230619_1888_Aki_TMTPro18x_K_F8 155.28 144.02 129170 91520 108790 120560 137660 148590 144620 143470 178560 147720 174420 182380 169560 142330 158750 175200 195710 174820 119190 84073 112720 119710 140960 148000 146420 147030 179690 150160 178990 182230 172730 149850 163740 175470 186750 166120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84908000 11132 2064 10530 21253 17046;17047 17047 2 9606 Homo sapiens 0.03177959158665544 GSPFPEVAESVQQELESYR Unmodified 2151.012 0.012027834 1657 Q8WVM8;A0A7I2V4B8;A0A7I2V5Z4;A0A7I2V3B4;A0A7I2V5I2;Q53GW1;Q8WVM8-2;Q8WVM8-3;A0A7I2V590;A0A7I2V320;A0A7I2V4U2;A0A7I2V3G4;A0A7I2V4R0;B7Z738;B7Z5N7;A0A7I2V448;A0A7I2V362;A0A7I2V2U5;H0YIZ7;A0A7I2V3C9;A0A7I2YQR2;A0A7I2V534;A0A7I2V5H5;G3V5E2 SCFD1 Sec1 family domain-containing protein 1 yes no 0 0 0 4.5 0.5 1 1 63.818 63.844 3 1.4001E-72 19676 20230619_1885_Aki_TMTPro18x_K_F5 248.75 231.82 48817 39523 47758 49530 42691 52336 49649 54935 57924 63305 64734 71674 65203 61601 67468 74231 74558 76059 45129 36269 48542 49243 44984 52755 49947 56151 58839 63764 66178 72026 66688 64511 68995 74478 71278 72217 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 134780000 11133 1657 10531 21254;21255 17048;17049 17049 2 9606 Homo sapiens -0.01743769840368259 GSPFQEEEGSALK Unmodified 1377.6412 0.64122431 2830 D3DVC4;P48681;Q2YDX4 NES Nestin yes no 0 0 0 3 0 1 49.503 49.581 3 0.0098187 13920 20230619_1882_Aki_TMTPro18x_K_F3 62.081 38.845 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11134 2830 10532 21256 17050 17050 1 9606 Homo sapiens -0.032490655781202804 GSPFQVTR Unmodified 890.46102 0.46101552 2654 B4E357;Q5JPB8;Q53HL4;Q53GT4;G3V1D3;G3V180;Q9NY33-4;Q9NY33;E9PQ14 DKFZp686O1117;DPP3 Dipeptidyl peptidase 3 yes no 0 0 0 1.5 0.5 1 1 41.309 41.347 2 0.016901 10431 20230619_1881_Aki_TMTPro18x_K_F2 91.783 61.363 156660 119860 131430 143540 160870 169040 152410 150970 187540 167320 166510 160300 180510 149530 158720 177740 184750 177240 144610 109960 136110 143340 164590 168620 155240 155900 188250 168080 172390 162720 182760 156130 163320 178080 176470 168370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159920000 11135 2654 10533 21257;21258 17051 17051 1 9606 Homo sapiens 0.011403450661873649 GSPLGEVVEQGITR Unmodified 1440.7573 0.75725712 3623 P51398-2;P51398-3;P51398;V9GYL9;V9GYJ9;E2JL21 DAP3;MRPS29 28S ribosomal protein S29, mitochondrial yes no 0 0 0 4 0 1 54.115 54.131 3 0.080666 15861 20230619_1883_Aki_TMTPro18x_K_F4 47.345 33.665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11136 3623 10534 21259 17052 17052 1 9606 Homo sapiens 0.05450877992552705 GSPLNAAPYGIESMSQDTEVR Oxidation (M) 2237.027 0.027025972 2028 P18031;A8K3M3;B4DSN5 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type yes no 0 1 0 4 0 1 51.1 51.131 3 1.3046E-06 14514 20230619_1883_Aki_TMTPro18x_K_F4 96.591 88.111 21165 19100 25211 22039 23954 25337 30181 34375 34322 36246 35926 36794 37889 28805 33007 43651 32998 34877 19614 17506 25239 22084 25128 25581 30211 34514 34807 36524 36874 37071 38349 30762 33710 43104 31585 33212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38136000 11137 2028 10535 21260 17053 17053 1272 1 9606 Homo sapiens -0.04200646034723832 GSPLVVISQGK Unmodified 1083.6288 0.62880913 1284 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q8NAN9 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 0 0 0 2.5 0.5 2 2 53.113 53.159 2;3 2.587E-12 15497 20230619_1882_Aki_TMTPro18x_K_F3 257.15 216.3 637600 488690 566770 653230 510390 553030 631070 631550 663270 751620 778620 764150 793940 692470 708850 847610 788460 850030 588800 448850 581300 644810 537860 568630 630540 643160 678830 753280 794000 772920 805870 724830 727500 849010 754050 807110 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6770899999.999999 11138 1284 10536 21261;21262;21263;21264 17054;17055;17056 17056 3 9606 Homo sapiens 0.09033987540146882 GSPMEISLPIALSK Unmodified 1441.7851 0.78505177 1222 A0A140VK27;P09960;B4DVZ8;P09960-2;P09960-4;Q59ES1;P09960-3 LTA4H Leukotriene A-4 hydrolase;Leukotriene A(4) hydrolase yes no 0 0 0 2 0 1 63.018 63.027 3 0.00077004 19995 20230619_1881_Aki_TMTPro18x_K_F2 84.859 69.473 81736 71998 86421 79456 85914 103390 89886 81438 104000 110420 103350 89849 105600 94417 101730 129240 102190 106640 75651 65969 87359 79971 89456 102240 90844 85484 105190 109460 106090 92389 107550 99051 103700 127970 97800 101510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101470000 11139 1222 10537 21265 17057 17057 1 9606 Homo sapiens 0.08183064928448402 GSPMSFEDSSR Unmodified 1198.4925 0.49245158 2488 B4DHJ9;Q15386;Q15386-2 UBE3C Ubiquitin-protein ligase E3C yes no 0 0 0 3 0 1 42.439 42.505 2 0.0017483 10710 20230619_1882_Aki_TMTPro18x_K_F3 95.775 80.113 31759 19789 29207 29504 36443 37092 35977 37588 43884 40395 45519 48983 48158 36334 45344 37509 49095 49132 29303 18215 29990 29091 37260 36938 36548 38428 44319 40931 46766 48877 48900 37994 46319 38352 46938 46542 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23969000 11140 2488 10538 21266 17058 17058 1 9606 Homo sapiens -0.09885494752688828 GSPQQIDHAK Unmodified 1079.536 0.53597137 3197 M0R0C6;Q92945;A0A384P5V3;M0R3J3 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 4.5 0.5 1 1 32.798 32.868 3 0.00050708 6697 20230619_1883_Aki_TMTPro18x_K_F4 101.71 76.859 56539 29701 65449 64278 91024 93532 73296 84428 89421 63610 89246 99340 75483 69829 88116 47589 96423 87368 52231 27513 66110 62392 91993 92089 75462 86284 90071 66512 91065 98136 78117 71835 89603 50551 92113 82594 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 96471000 11141 3197 10539 21267;21268 17059;17060 17059 2 9606 Homo sapiens -0.0006151719326226157 GSPRPQAPK Unmodified 936.51411 0.51411372 3905 Q14978-3;B2RAU8;A0A0A0MRM9;Q14978;Q14978-2;Q96J17 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 0 0 1 2 0.816 1 1 1 30.354 30.407 3 0.00031518 5877 20230619_1881_Aki_TMTPro18x_K_F2 122.13 77.688 193920 99006 234120 234660 333060 373870 238990 312330 277810 77976 134180 110870 85863 83732 212190 60211 156800 67572 179200 91882 235950 227350 335600 365690 247770 316780 274440 92682 142410 110380 95278 85947 209600 61825 149940 64429 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 91552000 11142 3905 10540 21269;21270;21271 17061;17062 17061 2 9606 Homo sapiens 0.04331722848837671 GSPSPASVSSGR Unmodified 1087.5258 0.52580062 132 A0A024R178;A0A0S2Z3F2;P10398;B4DV85;Q96II5 ARAF Serine/threonine-protein kinase A-Raf yes no 0 0 0 6.5 0.5 1 1 31.554 31.62 2 0.0081757 6385 20230619_1886_Aki_TMTPro18x_K_F6 74.162 55.382 10502 3711.2 10921 12604 8912.5 11793 10040 12552 10634 8162.6 16470 17950 19127 17229 18566 6369.8 17154 13117 9679.5 3481.7 11040 11968 9460.7 11978 10094 12656 11011 8784.8 16754 17739 19407 17219 18739 7001.2 16398 12402 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6768000 11143 132 10541 21272;21273 17063 17063 1 9606 Homo sapiens -0.014461249184705594 GSPSTVSSSYK Unmodified 1098.5193 0.51931826 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 0 8 0 1 38.955 38.942 2 6.5064E-12 9036 20230619_1888_Aki_TMTPro18x_K_F8 236.32 154.68 57422 29655 66728 50763 54377 76494 26588 35431 33781 21246 41789 48458 24430 33017 85794 13159 45283 37066 53046 27373 66704 49829 56853 74380 28774 38665 34273 23107 41899 47381 28441 33472 83516 15125 43661 34982 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26896000 11144 1958 10542 21274 17064 17064 1 9606 Homo sapiens -0.02600062869851172 GSPTGGAQLLK Unmodified 1027.5662 0.56620887 3896 Q14684;Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 0 1 0 1 45.825 45.825 2 2.9068E-06 12634 20230619_1880_Aki_TMTPro18x_K_F1 159.34 100.7 111650 93571 100040 101790 110870 128050 109160 112090 131950 121920 115700 122160 128780 101780 110030 136050 133450 119910 103160 85740 102760 102500 114370 127150 110880 115850 132520 122720 120080 123310 130110 107490 113640 135190 127370 114110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59968000 11145 3896 10543 21275 17065 17065 1 9606 Homo sapiens 0.05352841471949432 GSPTRPNPPVR Unmodified 1176.6364 0.63635412 1217 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;B4DLZ4;H0YBT4 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 1 2.5 1.12 1 1 1 1 28.704 28.768 3 0.00027883 5177 20230619_1882_Aki_TMTPro18x_K_F3 110.84 83.723 43416 32387 44224 52963 65726 63182 52307 53927 62218 59811 59443 53870 63844 57020 49826 63845 67276 58735 40130 29822 45219 51879 66145 62899 53825 55879 62751 59977 61257 55093 64391 59063 51949 63729 64142 55872 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 68535000 11146 1217 10544 21276;21277;21278;21279 17066;17067;17068 17068 3 9606 Homo sapiens 0.0551013986041653 GSQEVLGHAAR Unmodified 1123.5734 0.57341951 1337 C9JP01;B5MDE0;A0A291FGD9;Q96AA3 RFT1 Protein RFT1 homolog yes no 0 0 0 5 0 1 30.69 30.767 3 1.0737E-06 5955 20230619_1885_Aki_TMTPro18x_K_F5 128.97 86.662 11406 11332 12339 12111 14246 15807 13099 17939 18852 12619 15492 17571 16145 15102 17305 13401 18373 20067 10568 10376 12484 12225 14625 15753 13463 18019 18724 13195 16099 17524 16524 15571 17613 13880 17580 18983 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13065000 11147 1337 10545 21280 17069 17069 1 9606 Homo sapiens 0.01657574072373791 GSQFAIR Unmodified 777.41334 0.41333704 4145 Q75MR5;Q9P0U1;A6NIV2 TOM7;TOMM7 Mitochondrial import receptor subunit TOM7 homolog yes no 0 0 0 4.5 3.5 1 1 39.233 39.226 2 0.029782 9161 20230619_1888_Aki_TMTPro18x_K_F8 95.352 59.859 480680 332490 371340 465110 511830 496280 539760 525940 729990 463570 503670 421050 492030 394180 464850 520200 573610 399710 443210 305670 388970 459030 521310 500180 548030 533590 722970 471100 526300 429020 501330 414120 479410 513880 546570 381560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 226620000 11148 4145 10546 21281;21282 17070;17071 17071 2 9606 Homo sapiens 0.015726908659871697 GSQFGQSCCLR Unmodified 1298.5496 0.5495893 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 5.33 3.09 1 1 1 38.465 38.458 2 5.5398E-12 8852 20230619_1888_Aki_TMTPro18x_K_F8 225.22 207.16 294100 239180 243990 253740 286340 337280 302290 290950 334740 161030 144650 123320 151140 121020 202070 203420 191340 132520 271550 219140 252760 256230 294820 333640 304690 296950 331110 168920 157670 127160 156540 129220 203970 199130 182770 126840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 251080000 11149 3402 10547 21283;21284;21285 17072;17073;17074 17074 3 9606 Homo sapiens -0.08774350747967219 GSQGGNFEGPNK Unmodified 1190.5316 0.53161428 2614 B4DWI8;Q8WXF1 PSPC1 Paraspeckle component 1 yes no 0 0 0 5 0 1 38.468 38.56 3 0.00078001 8923 20230619_1885_Aki_TMTPro18x_K_F5 90.793 74.902 43204 28789 39378 41996 49951 54001 40555 49265 64070 40230 48176 46780 47244 39350 49472 45332 47761 41937 39874 26484 40485 41466 50847 53569 42175 50385 63230 41390 50127 46964 48351 41143 50147 45290 45674 39890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25725000 11150 2614 10548 21286 17075 17075 1 9606 Homo sapiens -0.056030264068112956 GSQGPLPFHEK Unmodified 1195.5986 0.59857163 2530;1065 B4DLN1;B4E1E9;I3L1E8;A0A0S2Z382;A0A0S2Z3G3;Q9UBX3;Q9UBX3-2;A0A0S2Z3I3;F6RGN5 SLC25A10 Mitochondrial dicarboxylate carrier no no 0 0 0 7 0 1 42.257 42.332 3 0.00021912 10185 20230619_1887_Aki_TMTPro18x_K_F7 109.6 32.657 79366 65972 81923 91160 101490 109130 103990 101130 118840 94456 103860 96636 105250 89939 100060 96433 96588 92173 73414 60597 83365 90193 103910 108780 105140 103690 119560 95942 107280 97812 107120 93330 101630 96596 92418 87608 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216480000 11151 2530;1065 10549 21287 17076 17076 1 9606 Homo sapiens 0.008596288749231462 GSQITQQSTNQSR Unmodified 1433.6859 0.68588309 500 B5BU53;B2R9L6;A0A024R880;P50750;P50750-2 CDK9 Cyclin-dependent kinase 9 yes no 0 0 0 6 0 1 29.472 29.503 3 5.9015E-08 5613 20230619_1886_Aki_TMTPro18x_K_F6 124.47 106.27 2757.5 788.86 2102.3 3525.9 3465.7 4083.7 3748.4 4228.6 5262.8 4095.3 3781 4227.1 4207.8 4319.5 2932 2595.1 4918.9 3331.1 2534.4 747.88 2220.4 3334.9 3505.7 4083.1 3806.9 4304.3 5214.6 4152.9 3968.7 4282.1 4228 4359.3 3110.5 2679.9 4676.2 3161.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4748700 11152 500 10550 21288 17077 17077 1 9606 Homo sapiens -0.013612417120839382 GSQTEFEQQER Unmodified 1337.5848 0.58477206 3037 H0YBG5;Q96EA4-2;Q96EA4-3;Q96EA4 SPDL1 Protein Spindly yes no 0 0 0 1 0 1 34.122 34.122 2 1.3963E-08 7651 20230619_1880_Aki_TMTPro18x_K_F1 179.19 155.77 22335 15854 19403 19873 20113 25511 20193 20390 32630 27009 29216 20931 29018 22741 19094 23142 30307 25038 20613 14556 19970 19810 20897 25244 20739 21353 32382 26785 30049 21605 29148 23441 20229 23345 28853 23780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19237000 11153 3037 10551 21289 17078 17078 1 9606 Homo sapiens -0.07051693414837246 GSQTGTSIGGDAR Unmodified 1205.5636 0.56364269 797 A0A075B7B1;O15061-2;O15061;H0YL34 SYNM Synemin yes no 0 0 0 3 0 1 30.807 30.893 2 0.00015088 5933 20230619_1882_Aki_TMTPro18x_K_F3 134.56 113.86 6234.3 1855.9 6207.7 6714.7 19262 26392 10504 12741 11893 8147 12974 21200 12004 10552 14662 5774.5 15825 18196 5741.6 1747 6514.3 6611.4 18784 24849 11141 13819 12074 8885 13280 20525 12411 10989 14876 6603.5 15147 17142 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6312900 11154 797 10552 21290 17079 17079 1 9606 Homo sapiens -0.0309165872365611 GSRPIDTSR Unmodified 987.50976 0.50975662 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C044;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 1 5.5 0.5 1 1 23.161 23.215 3 0.002072 3858 20230619_1886_Aki_TMTPro18x_K_F6 87.895 75.299 192380 93780 215490 234550 276270 290590 226900 266270 273680 206290 270390 279610 240510 215590 251670 136610 300860 268480 177620 87148 217970 225720 280720 288760 233240 272010 275790 214000 276360 278130 247050 220440 257750 146340 287160 253730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86637000 11155 1676;2901 10553 21291;21292 17080 17080 1 9606 Homo sapiens 0.015502136352779416 GSSAAGLTASVMR Oxidation (M) 1222.5976 0.59758535 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 1 0 4.5 3.5 1 1 38.82 38.813 2 0.0036541 9569 20230619_1880_Aki_TMTPro18x_K_F1 80.688 65.913 82954 62747 72568 77885 87605 109510 91883 87221 113940 55975 60753 47087 47302 45061 73442 52117 59098 47888 76590 57590 74862 77803 90081 107780 93013 89807 112500 58114 64206 48214 49995 46903 73308 52099 56606 45570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94802000 11156 2188 10554 21293;21294 17081;17082 17081 1362 2 9606 Homo sapiens -0.004809535563026657 GSSAGGGGSGAAAATAATAGGQHR Unmodified 1926.8892 0.88922736 1620 C9JLG5;A0A6Q8PFA5;C9JA65;Q75M98;Q75M99;A0A6Q8PH75;A0A6Q8PHD2;A4D0U1;O00458 IFRD1 Interferon-related developmental regulator 1 yes no 0 0 0 6.5 0.5 1 1 29.692 29.798 3 1.4728E-08 5307 20230619_1887_Aki_TMTPro18x_K_F7 105.96 96.209 0 982.76 0 1097.3 0 0 0 0 0 0 0 0 0 0 1075.8 0 0 1482 0 897.4 0 1082.5 0 0 0 0 0 0 0 0 0 0 1010.2 0 0 1386.5 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 9888700 11157 1620 10555 21295;21296 17083;17084 17084 2 9606 Homo sapiens -0.037141687284474756 GSSASLVLK Unmodified 860.49673 0.49673232 669 Q8NCF7;A0A024RBE8;A0A024RBH9;Q00325-2;Q00325;B2RE88 SLC25A3 Phosphate carrier protein, mitochondrial yes no 0 0 0 1.5 0.5 2 2 47.089 47.126 2;3 5.3681E-05 13069 20230619_1881_Aki_TMTPro18x_K_F2 182.53 89.84 511080 385510 430450 528270 879190 910160 567860 581130 776680 357360 450160 439450 404140 379470 498910 468780 530370 491770 471740 354200 451170 526130 869540 883740 596640 610280 765340 376810 475330 440860 418930 397940 507210 471040 506880 466980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 718610000 11158 669 10556 21297;21298;21299;21300 17085;17086 17086 2 9606 Homo sapiens 0.06090382523188964 GSSAVGLTAYVMK Unmodified 1282.6591 0.65912298 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57;A0A3B3ITP6;A0A3B3IRR8 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 3 0 1 57.288 57.32 2 7.5124E-11 17319 20230619_1882_Aki_TMTPro18x_K_F3 223.14 189.07 78895 68263 65786 63511 53934 80753 71996 70320 79010 54111 48455 32279 48851 37320 64467 44467 45978 32396 72878 62462 67753 64814 57649 80094 71755 72113 78798 54954 51107 33996 50552 38733 64142 43969 44076 30947 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59161000 11159 471 10557 21301 17087 17087 1 9606 Homo sapiens 0.029099781429977156 GSSCFECTHYQSFLEYR Unmodified 2169.8884 0.888424 1176 B8XPJ7;B8XPJ8;A0A140VJG8;P21964-2;P21964;A0A7I2V370 COMT Catechol O-methyltransferase yes no 0 0 0 6.5 0.5 1 1 51.849 51.924 3 1.1547E-23 14453 20230619_1887_Aki_TMTPro18x_K_F7 205.52 201.92 69303 53288 65305 58921 56829 60862 65191 57393 63420 75946 60259 73139 77586 65015 61650 95886 85840 90200 64028 48852 66499 59108 59902 61351 65205 59395 64696 75654 62821 74084 77907 68967 64496 95427 81927 85717 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117620000 11160 1176 10558 21302;21303 17088 17088 1 9606 Homo sapiens -0.14972467483994478 GSSDVDQLGK Unmodified 1004.4775 0.47745344 3773 Q00534 CDK6 Cyclin-dependent kinase 6 yes yes 0 0 0 3 0 1 41.982 42.044 2 0.00029922 10497 20230619_1882_Aki_TMTPro18x_K_F3 132.78 91.792 90302 54027 115960 111600 120540 119310 86394 100590 85216 107270 135630 150070 131570 127530 114400 78157 178880 143730 83556 49972 115640 107970 123740 119580 89238 104250 88995 109310 136690 149460 133730 129690 119960 83151 170280 135950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30750000 11161 3773 10559 21304 17089;17090 17090 2 9606 Homo sapiens -0.024606185583706974 GSSEQAESDNMDVPPEDDSK Oxidation (M) 2151.8386 0.83861608 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;Q59GP7;K7EKJ9;K7ERM6;K7EJ09;K7ER69;K7EM82;K7ENK6 ILF3 Interleukin enhancer-binding factor 3 yes no 0 1 0 1 0 2 39.204 39.204 3 2.0665E-12 9851 20230619_1880_Aki_TMTPro18x_K_F1 144.01 144.01 64947 49820 60386 65649 72697 86929 72817 76856 91758 85580 103000 108040 101770 88887 76588 103450 118800 111280 59996 45751 61949 65257 74633 86025 74011 79426 92821 86721 105080 108010 102760 93073 80797 104080 113210 105640 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 210560000 11162 3823 10560 21305;21306 17091;17092;17093;17094 17092 2502 4 9606 Homo sapiens -0.19122968469628177 GSSEQAESDNMDVPPEDDSK Unmodified 2135.8437 0.84370146 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;Q59GP7;K7EKJ9;K7ERM6;K7EJ09;K7ER69;K7EM82;K7ENK6 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 1 0 2 43.316 43.316 3 1.6282E-22 11500 20230619_1880_Aki_TMTPro18x_K_F1 181.4 172.75 33570 25660 31372 31316 33215 40347 29801 34719 53860 42809 49523 57261 52221 47460 38359 65610 62072 57450 31012 23546 32077 31281 34351 39976 31003 36060 53299 43303 51153 57155 52606 50196 40709 65100 59129 54670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63044000 11163 3823 10560 21307;21308 17095;17096 17095 2 9606 Homo sapiens -0.17878664607042083 GSSFEMTDDDSAIR Unmodified 1529.6304 0.63040162 3081 H7BXY3;Q7L2E3-3;Q7L2E3;Q7L2E3-2 DHX30 Putative ATP-dependent RNA helicase DHX30 yes no 0 0 0 1 0 2 47.312 47.312 2 2.5323E-06 13241 20230619_1880_Aki_TMTPro18x_K_F1 131.13 120.52 23900 18482 25314 25022 23265 31837 24451 27484 29661 39032 33165 41463 40189 36130 31074 50424 49185 50560 22103 16977 25570 24816 24413 31556 24767 28672 30124 38887 34218 41784 40397 38192 32866 50385 46894 48016 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25648000 11164 3081 10561 21309;21310 17097;17098 17097 2 9606 Homo sapiens -0.11322836014733184 GSSGGSGAKPSDAASEAAR Unmodified 1661.7605 0.7605046 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C044;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 1 4.5 0.5 1 1 31.715 31.785 3 8.1183E-15 6212 20230619_1883_Aki_TMTPro18x_K_F4 163 151.96 35033 16638 46631 49624 57820 77637 50887 55934 49895 44157 67461 62683 56013 37899 70445 13683 35336 23235 32398 15524 46609 47675 59054 75766 51720 58309 51535 45818 67887 61889 58077 38669 69119 14885 34065 22012 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58723000 11165 1676;2901 10562 21311;21312 17099;17100 17099 2 9606 Homo sapiens -0.04390523691358794 GSSGGSGAKPSDAASEAARPATSTLNR Unmodified 2502.2059 0.20587005 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C044;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 2 8 0 1 36.673 36.66 4 3.4763000000000003E-29 8089 20230619_1888_Aki_TMTPro18x_K_F8 190.33 179.08 55778 44749 52833 52643 58866 60076 58758 50521 47278 64718 58009 40677 51111 31995 61827 31332 32578 15971 51548 41040 53996 52620 60594 59994 58905 52662 49337 63877 58629 42071 52760 33306 60892 30757 31338 15393 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 275130000 11166 1676;2901 10563 21313 17101 17101 1 9606 Homo sapiens 0.01485534857829407 GSSGVGLTAAVLR Unmodified 1186.667 0.66698555 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 2.5 0.5 1 1 49.494 49.562 2 2.5902E-09 13900 20230619_1882_Aki_TMTPro18x_K_F3 169.82 136.93 276050 248670 254770 237420 264700 336860 261520 284550 339100 117270 98688 84517 107220 95948 188390 103530 119530 83056 255250 227550 260650 242190 274620 331860 266220 289720 330840 126960 113040 87860 113120 98979 185850 103070 114780 79237 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 392490000 11167 1091 10564 21314;21315 17102 17102 1 9606 Homo sapiens 0.08111873454799934 GSSGVGLTAAVTTDQETGER Unmodified 1934.9181 0.91812745 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 3 0.816 1 1 1 45.342 45.41 3 9.7367E-30 12019 20230619_1882_Aki_TMTPro18x_K_F3 202.81 186.31 155040 115770 140480 152240 148420 167710 166730 157400 193950 223000 215010 214230 238210 198540 188100 239880 242660 244620 143170 106330 144120 150930 154120 168170 167880 163270 197070 221570 220570 217330 240010 207550 195440 240510 231660 232280 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 955770000 11168 1104 10565 21316;21317;21318 17103;17104;17105 17105 3 9606 Homo sapiens -0.01193488942658405 GSSLGAGNVADR Unmodified 1102.5367 0.53669966 1638 A0A6Q8PGU6;Q8NB90-2;Q8NB90 SPATA5 Spermatogenesis-associated protein 5 yes no 0 0 0 4 0 1 35.042 35.092 2 4.9656E-07 7576 20230619_1883_Aki_TMTPro18x_K_F4 164.81 116.72 35400 24391 41536 41201 44455 45462 48416 48124 53566 40438 58864 57457 53359 46762 44222 33271 62811 53364 32748 22477 41726 40268 46003 45690 48755 48784 54409 41811 59880 57176 54218 47888 46085 34821 59852 50507 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28220000 11169 1638 10566 21319 17106 17106 1 9606 Homo sapiens -0.010467225441971095 GSSLLFR Unmodified 778.43374 0.43373813 735 A8YXX5;Q9NZJ7;Q9NZJ7-2;A0A024RCX4;A0A8Q3WLQ4;A0A8Q3WKF6;A0A024RD08;A0A8Q3WKA3;A4FVA6;H7C196;Q9NZJ7-3 PIG60;MTCH1 Mitochondrial carrier homolog 1 yes no 0 0 0 2.5 0.5 1 1 47.229 47.307 2 0.047651 12929 20230619_1882_Aki_TMTPro18x_K_F3 87.284 4.8981 227250 188500 207980 249660 262450 298070 295540 293960 331850 213420 260630 255680 227470 208890 273520 250500 288040 269470 210000 173060 214010 247650 269300 297540 297050 298450 332680 221470 269390 256220 235570 219140 277990 252210 275330 255810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235030000 11170 735 10567 21320;21321 17107 17107 1 9606 Homo sapiens 0.03565861525805758 GSSNFCVK Unmodified 897.40145 0.40145173 86 A0A024R0A8;O43865;Q2NKW8;V5YQL4;O43865-2 AHCYL1;FGFR2-AHCYL1 Adenosylhomocysteinase;Putative adenosylhomocysteinase 2 yes no 0 0 0 8 0 1 42.448 42.451 2 0.071197 10471 20230619_1888_Aki_TMTPro18x_K_F8 61.999 20.015 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11171 86 10568 21322 17108 17108 1 9606 Homo sapiens -0.05135293939497387 GSSNNQDVVTCDMACK Unmodified 1784.7128 0.71276782 2449 B3LEU8;Q6NUQ4-2;Q6NUQ4;B4DKI3;H7C008;Q8N3H6;B2RD07;H7BZI0 TMEM214;DKFZp761L1314 Transmembrane protein 214 yes no 0 0 0 4 0 1 44.319 44.363 3 0.00023915 11455 20230619_1883_Aki_TMTPro18x_K_F4 88.385 77.727 18804 14810 18356 17653 18982 23029 21833 18323 27549 25139 20661 23889 28084 19602 22352 30755 32338 26103 17380 13585 18694 17666 19769 22768 22011 19232 27480 25016 21866 24159 28143 20965 23423 30439 30801 24865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25230000 11172 2449 10569 21323 17109 17109 1 9606 Homo sapiens -0.14820005269734793 GSSNSYAIK Unmodified 925.45051 0.45051041 300 M0R0F0;A0A024R4Q8;M0R0R2;P46782;M0QZN2 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 0 0 0 8 0 1 40.24 40.23 2 0.0001155 9539 20230619_1888_Aki_TMTPro18x_K_F8 173.75 111.23 145420 72045 196920 167170 319140 401920 225220 291430 260870 54565 97076 71644 67214 65175 179880 36900 117950 56819 134530 66846 197470 163840 319610 385590 233690 298610 256580 68769 106070 71998 74991 65929 176680 39135 113030 53980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 297660000 11173 300 10570 21324 17110 17110 1 9606 Homo sapiens -0.015196823789096925 GSSPGPRPVEGTPASR Unmodified 1550.7801 0.78011783 2251 B2R7X3;Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes no 0 0 1 6.5 0.5 1 1 29.814 29.883 3 6.8672E-08 5784 20230619_1886_Aki_TMTPro18x_K_F6 103.01 86.872 15795 11299 11962 13143 12773 11488 12424 15436 15510 16948 15888 16167 21458 16432 14419 16799 17463 14063 14564 10366 12484 13108 13188 11843 12653 15528 15660 17017 16521 16453 21376 16966 14965 16721 16656 13398 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 25140000 11174 2251 10571 21325;21326 17111;17112 17111 2 9606 Homo sapiens 0.026758971100207418 GSSPTPPCSPVQPSK Unmodified 1524.7242 0.72424243 478 Q9NUL3;Q4LE57;Q9NUL3-2;Q9NUL3-4;Q9NUL3-7;Q9NUL3-3;Q9NUL3-6;Q9NUL3-8;A0A024R7X7;Q2TBD5;E7EVJ4;E7EPX0;A8K276;H0YBY0 STAU2;STAU2 variant protein Double-stranded RNA-binding protein Staufen homolog 2 yes no 0 0 0 8 0 1 42.06 42.058 3 2.2753E-06 10316 20230619_1888_Aki_TMTPro18x_K_F8 119.62 108.35 21309 21115 21363 19857 22977 20756 22681 20457 23591 22841 21037 21497 24044 19390 22454 26319 27610 24044 19731 19313 21705 20191 23690 20944 22914 20991 23894 22917 21844 21819 24370 20441 23165 26197 26343 22874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21361000 11175 478 10572 21327 17113 17113 1 9606 Homo sapiens -0.017130721218109102 GSSSANPVNSVR Unmodified 1173.5738 0.57381344 1250 A8K3S3;A0A140VKF1;Q99661-2;Q99661;Q5JR89;B7Z7M6 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C yes no 0 0 0 6.5 0.5 1 1 32.861 32.948 2 3.7142E-06 6496 20230619_1887_Aki_TMTPro18x_K_F7 145.23 122.65 22315 12087 21191 23933 21778 29314 20650 19462 31271 24681 25088 21899 30090 19474 24246 18700 25094 20101 20582 11178 21649 23232 22611 28975 21213 20709 30999 24609 26219 22268 30230 20162 24769 18906 23967 19096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26721000 11176 1250 10573 21328;21329 17114;17115 17115 2 9606 Homo sapiens -0.00603050998438448 GSSSQLYR Unmodified 896.43519 0.4351947 2725 B9EK47;Q9P2D3-3;Q9P2D3 HEATR5B HEAT repeat-containing protein 5B yes no 0 0 0 7 0 1 32.188 32.281 2 0.024256 6243 20230619_1887_Aki_TMTPro18x_K_F7 85.212 65.425 12505 6644.8 12549 11997 12586 16439 12733 13280 14602 7586.9 11815 11707 10070 9036.9 10732 7064.9 13049 11098 11538 6137.2 12743 11725 13097 16195 12892 13634 14627 8111.3 12178 11609 10371 9306.5 11007 7370.4 12449 10506 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4229100 11177 2725 10574 21330 17116 17116 1 9606 Homo sapiens -0.01716549176103399 GSSSYSQLLAATCLTK Unmodified 1685.8294 0.82943578 2083 A8K607;Q9UIA9;E7ESC6;H0YBE1 XPO7 Exportin-7 yes no 0 0 0 4 0 1 60.343 60.346 3 3.6571E-19 18447 20230619_1883_Aki_TMTPro18x_K_F4 196.18 176.86 104030 89004 97306 104090 95568 116990 110180 108090 122170 123690 122400 120440 129040 108430 118970 140640 141210 140940 96170 81603 99438 104060 99908 117110 110630 111460 123830 124080 125850 122040 131030 113960 122500 140760 134890 133860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220580000 11178 2083 10575 21331 17117;17118 17118 2 9606 Homo sapiens 0.013954242839645303 GSSVDGSPLLLFLR Unmodified 1459.8035 0.80347903 1509 A0A3B3ISH6;Q5HYL4;Q86U38-2;Q86U38 DKFZp686E1893;NOP9 Nucleolar protein 9 yes no 0 0 0 3 0 1 64.497 64.529 2 0.034443 20360 20230619_1882_Aki_TMTPro18x_K_F3 93.336 76.825 219240 207500 216990 203680 206310 249340 278960 274810 294270 169100 152550 109350 142030 111600 211350 187600 170300 107010 202910 189880 220460 206840 217210 249270 277400 276080 292840 174930 162620 114150 148580 119030 211280 182880 162900 102720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53516000 11179 1509 10576 21332 17119 17119 1 9606 Homo sapiens 0.09196942894641325 GSTAPVGGGAFPTIVER Unmodified 1614.8366 0.83657007 1478 A0A384NPU5;Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 0 7.5 0.5 1 1 52.341 52.416 3 5.9731E-39 14555 20230619_1888_Aki_TMTPro18x_K_F8 189.91 166.55 182460 147180 193960 215630 179760 211570 202360 213940 275870 258850 246610 297510 311420 255940 250550 306310 289260 328950 168790 135300 196010 212010 188640 214210 205050 219610 275790 260410 257530 298710 312870 268100 258300 308100 276660 312050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 791860000 11180 1478 10577 21333;21334 17120;17121 17121 2 9606 Homo sapiens 0.05374524946728343 GSTAPVGGGAFPTIVEREPWDGR Unmodified 2355.1608 0.16075776 1478 A0A384NPU5;Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 1 6.5 0.5 1 1 56.087 56.153 3 1.8087E-74 16514 20230619_1886_Aki_TMTPro18x_K_F6 292.36 261.95 235720 173350 234110 232580 190940 252520 268870 258540 290980 322000 303580 314670 328660 302240 298360 350220 346930 384610 217810 159250 237380 230300 204140 253830 267290 265400 295850 321770 312080 319310 333390 314710 306910 352930 331730 364800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1148100000 11181 1478 10578 21335;21336 17122;17123 17122 2 9606 Homo sapiens 0.03738380853201306 GSTAVGVR Unmodified 745.40825 0.40825167 1051 Q05DH1;A0A0K0K1K4;O14818;H0UI83;O14818-4 PSMA7;hCG_41772 Proteasome subunit alpha type;Proteasome subunit alpha type-7 yes no 0 0 0 6.5 0.5 1 1 29.877 29.946 2 0.024976 5819 20230619_1886_Aki_TMTPro18x_K_F6 84.568 51.052 22806 10351 30191 32537 42158 47001 30564 45033 65809 16956 25391 36901 23638 24386 31831 9660.7 36230 24172 21086 9673.3 30245 31175 42593 46322 32577 45349 63267 19334 27958 36078 24627 24772 32334 10839 34539 22849 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14985000 11182 1051 10579 21337;21338 17124 17124 1 9606 Homo sapiens 0.025363870033743297 GSTDNLMDDIER Oxidation (M) 1380.5827 0.58272315 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 1 0 1 0 1 41.845 41.845 2 0.00022675 10893 20230619_1880_Aki_TMTPro18x_K_F1 113.22 87.106 312850 285780 289180 338120 357410 339840 313640 307500 356380 370020 412870 377480 398140 333780 367270 448980 390460 408990 289310 261980 296940 337160 364340 343010 320190 318150 363030 370840 420040 381680 405290 351800 375760 446850 373500 388810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 419500000 11183 3621 10580 21339 17125 17125 2301 1 9606 Homo sapiens -0.09234490214976177 GSTDNLMDDIER Unmodified 1364.5878 0.58780853 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 1.5 0.5 1 1 50.835 50.861 2 1.6722000000000002E-24 14679 20230619_1880_Aki_TMTPro18x_K_F1 265 237.67 891450 732250 798000 853630 722960 936790 822590 836140 936700 1097700 982400 1056500 1178000 960040 1041300 1201300 1109400 1133600 823600 671440 817730 853270 761020 938510 827520 868110 950850 1093900 1014900 1070800 1189300 1006400 1065900 1199100 1061000 1077300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2279700000 11184 3621 10580 21340;21341 17126;17127 17126 2 9606 Homo sapiens -0.07990186352344608 GSTESCNTTTEDEDLK Unmodified 1785.7211 0.72106713 1721 A0A8V8TQ77;A0A804CJ50 no no 0 0 0 1 0 1 40.272 40.272 3 0.00055228 10212 20230619_1880_Aki_TMTPro18x_K_F1 76.412 66.215 13085 10627 17836 17044 20022 18726 15578 17633 18132 15867 21179 19736 20973 19509 20172 10863 28237 23842 12135 9779.6 17744 16702 20469 18784 16063 18041 18441 16254 21568 19842 21390 19687 20915 11814 26909 22523 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49102000 11185 1721 10581 21342 17128 17128 1 9606 Homo sapiens -0.14036456547773923 GSTLDLSDLEAEK Unmodified 1376.6671 0.66710471 3216 O00767;Q59GX7 SCD Acyl-CoA desaturase yes no 0 0 0 2.5 0.5 1 1 58 58.022 3 1.9573E-06 17619 20230619_1882_Aki_TMTPro18x_K_F3 138.24 101.39 155790 141990 169290 161270 127830 150900 147650 167230 169470 185560 174490 154450 206180 166170 152910 233790 195980 172620 144260 130120 170160 161250 136660 153770 148570 170150 171760 185580 179990 158810 206870 174570 159250 230190 186930 164690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 149530000 11186 3216 10582 21343;21344 17129;17130 17130 2 9606 Homo sapiens -0.006162161265137911 GSTPYGGVK Unmodified 864.43413 0.43413207 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHJ0;A0A5F9ZHD4;A0A5F9ZI66;A0A5F9ZHH9;H0YEL7 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 7.5 0.5 1 1 39.875 39.864 2 0.00027648 9205 20230619_1887_Aki_TMTPro18x_K_F7 114.89 70.447 199680 103420 261410 266280 406790 461580 319660 388820 345460 188680 309800 301760 264500 249570 375170 130310 378460 267000 184690 96132 262670 257700 408620 449760 328290 396570 348440 205090 317750 299420 276830 252870 378290 141370 361300 252560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 262580000 11187 1208 10583 21345;21346 17131;17132 17131 2 9606 Homo sapiens -0.0035076354498642104 GSTPYKGDDEGIFISR Unmodified 1740.8319 0.83187862 1039 A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160;Q14160-3;A0A0G2JMS7;Q14160-2;A0PJK8;H0YDF9 SCRIB Protein scribble homolog yes no 0 0 1 5 0 1 48.318 48.395 3 0.0023613 13054 20230619_1885_Aki_TMTPro18x_K_F5 73.345 63.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11188 1039 10584 21347 17133 17133 1 9606 Homo sapiens -0.00890403986727506 GSVAEAEDCYNTALR Unmodified 1654.7257 0.72569899 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 0 3 0 1 47.109 47.189 3 1.3133E-10 12890 20230619_1882_Aki_TMTPro18x_K_F3 153.7 152.67 64296 53845 67196 57573 54230 65017 55032 60877 92015 80934 68674 64655 57924 63243 72849 75524 72938 70645 59484 49331 67757 57985 57488 65101 56617 62979 90709 80272 71076 66316 60282 65880 73837 75424 69770 67159 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68165000 11189 1842 10585 21348 17134 17134 1 9606 Homo sapiens -0.07547482823702012 GSVDSNWIVGATLEK Unmodified 1574.794 0.79403656 3367 O96008 TOMM40 Mitochondrial import receptor subunit TOM40 homolog yes yes 0 0 0 7 0 1 61.51 61.549 3 2.4569E-05 18485 20230619_1887_Aki_TMTPro18x_K_F7 101.42 82.676 167960 120090 147220 198870 175190 154940 215420 184110 202310 203190 171150 190290 230410 167780 188650 226630 180780 179430 155020 110610 152000 193640 180480 160690 214320 186750 205770 203900 179820 192970 231090 176990 192340 224060 173040 170930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1004199999.9999999 11190 3367 10586 21349 17135 17135 1 9606 Homo sapiens 0.02963129818476773 GSVEEPKPEEPK Unmodified 1324.6511 0.65106071 3790;4031 Q5CZB5;Q02952-3;Q02952-2;Q02952 DKFZp686M0430;AKAP12 A-kinase anchor protein 12 no no 0 0 1 2.5 0.5 1 1 39.185 39.245 3 0.00024086 9457 20230619_1881_Aki_TMTPro18x_K_F2 104.24 77.703 126540 91169 101010 114860 92516 108980 97598 103530 145790 144820 170970 184730 154810 146410 158160 159700 186130 203400 116730 83705 104670 113960 97127 110520 99665 107280 146750 145370 173610 184350 158790 152960 162330 162710 177930 192670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187110000 11191 4031;3790 10587 21350;21351 17136 17136 1 9606 Homo sapiens 0.0017212242723871896 GSVLSER Unmodified 746.39227 0.39226725 4604 Q9NVM6 DNAJC17 DnaJ homolog subfamily C member 17 yes yes 0 0 0 4 0 1 34.478 34.528 2 0.073323 7353 20230619_1883_Aki_TMTPro18x_K_F4 75.692 15.044 35430 21930 37553 52254 56517 63421 61529 62263 77064 52371 72732 68873 68256 56882 61367 38131 75420 64818 32727 20332 38364 50341 57356 63185 62190 63423 77334 54003 74593 68736 69475 58117 63159 40201 71952 61321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18031000 11192 4604 10588 21352 17137 17137 1 9606 Homo sapiens 0.008926807664693115 GSVPLGLATVLQDLLR Unmodified 1650.9669 0.96685596 2420 B3KUH0;Q8WUX9;E5RJI3;E5RIU9;Q8WUX9-2 CHMP7 Charged multivesicular body protein 7 yes no 0 0 0 5 0 1 67.883 67.926 3 0.00055282 21342 20230619_1885_Aki_TMTPro18x_K_F5 76.391 55.728 3265.6 3137.8 3015.2 4026.5 2349.2 3517.7 4356.3 4243.4 4650.1 4000.7 3933.8 3108.2 3190.8 2910 3250.8 4391.1 3847.7 3922.1 3021 2878.4 3082.4 3985.9 2553.7 3609.4 4283.3 4279.1 4687.7 4029.3 4032.1 3194.3 3285.6 3086.1 3344.1 4358.8 3676.2 3730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2503200 11193 2420 10589 21353 17138 17138 1 9606 Homo sapiens 0.1674112094569864 GSVSCPTCQAVGR Unmodified 1377.6129 0.61291784 3013 G3XAG1;Q96ME7-3;Q96ME7;B4DES6;B7Z9P6;Q96ME7-2 ZNF512 Zinc finger protein 512 yes no 0 0 0 7 0.816 1 1 1 35.06 35.099 2 6.0665E-15 7314 20230619_1887_Aki_TMTPro18x_K_F7 196.44 177.17 81159 64943 77583 89905 114620 111770 102980 104380 138830 82149 66471 75096 97813 82311 84501 86458 125150 102570 75008 59661 79729 88989 115760 111200 105540 106530 136440 84141 73042 76795 98290 84938 88393 87713 119190 97336 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 125020000 11194 3013 10590 21354;21355;21356 17139;17140;17141 17140 3 9606 Homo sapiens -0.06078410030750092 GSVVNVNPTNTRPQSDTPEIR Unmodified 2280.1458 0.14583597 1017 E7EN19;Q53TX8;A0A0D9SEY1;B7Z388;O95819-3;O95819-6;G5E948;V9HWH3;O95819-2;B7Z3V5;O95819;O95819-5;H7C360;O95819-4;E7ENQ1;Q5MD60;E7EX83;H7C0P6 MAP4K4;HEL-S-31 Mitogen-activated protein kinase kinase kinase kinase 4 yes no 0 0 1 7 0 1 42.253 42.328 3 1.2554E-09 10199 20230619_1887_Aki_TMTPro18x_K_F7 121.07 96.534 67594 46225 51985 60387 56924 62748 65179 62561 71251 70878 70622 73142 79589 67181 64064 84460 70167 71134 62319 42467 54233 59841 58998 63264 65418 64160 72240 71258 72887 73962 80204 70388 65870 83798 67083 67701 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152370000 11195 1017 10591 21357 17142 17142 1 9606 Homo sapiens 0.05696888985175974 GSYGDLGGPIITTQVTIPK Unmodified 1916.0255 0.025493054 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;B3KU16;S4R359 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 1.5 0.5 1 1 61.73 61.735 3 1.5089E-14 19193 20230619_1880_Aki_TMTPro18x_K_F1 152.37 123.83 162440 120470 143390 166890 159540 180560 162070 146030 166500 188200 178900 191450 202570 158370 172800 198540 182730 221570 149970 110710 147630 164810 164570 180730 163410 152780 170050 188020 184090 193010 204470 166690 176950 200070 175000 210060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1490599999.9999998 11196 1865 10592 21358;21359 17143;17144 17143 2 9606 Homo sapiens 0.10412132729516088 GSYGLDLEAVR Unmodified 1178.5932 0.5931519 3241 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes yes 0 0 0 4 0 1 52.327 52.351 2 0.010085 15089 20230619_1883_Aki_TMTPro18x_K_F4 72.848 51.45 97210 84154 101660 110260 113160 124700 128890 114840 134480 123440 125480 134200 130500 119210 131580 145980 165990 143960 89954 77241 103140 109370 117010 124760 129170 118280 136320 124650 129490 135240 133190 124830 135750 146120 158330 136840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45890000 11197 3241 10593 21360 17145;17146 17146 2 9606 Homo sapiens 0.010999052924717034 GSYSSYGR Unmodified 875.37735 0.37734547 1275;194 P15884-3;A0A1B0GVR6;P15884-13;P15884-4;P15884-11;E9PH57;H3BTP3;A0A1B0GVB8;A0A075B723;H3BT24;A0A0D9SFX5;H3BTZ0;H3BNI2;A0A0D9SGE5;H3BP59;G0LNT6;A0A0D9SF18;A0A0D9SEX8;H3BTC3;A0A0D9SG55;G0LNT4;A0A0D9SG61;H3BMC8;A0A1B0GTP2;H3BUQ3;H3BPJ7;B3KVA4;A0A024R2C0;P15884-15;P15884-7;P15884-5;P15884-10;P15884-14;P15884-12;P15884 TCF4 Transcription factor 4 no no 0 0 0 6.5 0.5 1 1 32.608 32.67 2 0.057328 6774 20230619_1886_Aki_TMTPro18x_K_F6 69.998 25.306 21171 12516 24219 23048 23643 24391 19942 24027 24995 20132 33282 30316 25612 25062 29834 20816 34038 30801 19565 11556 24325 22416 24492 24541 20511 24465 25467 20868 33406 30147 26605 25794 30442 21577 32504 29161 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12137000 11198 1275;194 10594 21361;21362 17147 17147 1 9606 Homo sapiens -0.0653281110151056 GSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPR Oxidation (M) 3746.7886 0.78864019 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5QJR3;R4GMP9 KDM1A Lysine-specific histone demethylase 1A yes no 0 1 0 8 0 1 61.433 61.462 4 0.0046061 18406 20230619_1888_Aki_TMTPro18x_K_F8 51.544 47.317 21678 17249 20856 21754 19186 19172 21049 19798 20254 25273 25360 23661 22719 20540 24148 25438 22852 25746 20035 15831 21231 21569 20091 19606 21102 20338 20903 25187 25658 23990 23341 21548 24468 25498 21897 24440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26129000 11199 1785 10595 21363 17148 17148 1153 1 9606 Homo sapiens 0.025117411714745685 GSYTAQFEHTILLRPTCK Unmodified 2121.0677 0.067708995 1169 F8VQZ7;A0A140VJE3;P50579-2;P50579;F8VRR3;P50579-3;Q96B43 METAP2 Methionine aminopeptidase 2;Methionine aminopeptidase yes no 0 0 1 4 0 1 51.581 51.609 4 4.7713E-07 14743 20230619_1883_Aki_TMTPro18x_K_F4 119.31 107.17 116790 89808 104470 109720 126000 147560 143220 133550 143110 128840 123810 128250 148830 126270 117860 171330 183640 179760 107860 82408 107540 109660 129690 145990 143340 137270 145050 130490 129060 130250 149730 132730 124310 171740 175040 170660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215510000 11200 1169 10596 21364 17149 17149 1 9606 Homo sapiens 0.05201784866221715 GSYYSTGAPSGQTELSQER Unmodified 2016.9025 0.90247738 4067 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 yes yes 0 0 0 4 0 1 42.517 42.561 3 2.3954E-06 10645 20230619_1883_Aki_TMTPro18x_K_F4 101.53 97.216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11201 4067 10597 21365 17150 17150 1 9606 Homo sapiens -0.06529775459716802 GTAFGGWK Unmodified 822.40244 0.40243801 3436 Q6IRT1;Q6FI45;P11766;Q5U043;Q2VIM7 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 yes no 0 0 0 2.5 0.5 1 1 51.144 51.202 2 0.001673 14643 20230619_1882_Aki_TMTPro18x_K_F3 138.9 79.69 428210 383750 402040 349940 519870 730390 492480 480120 800930 313680 302270 273580 304170 263890 431030 290850 336060 271480 395990 351050 412260 361340 531870 703670 507120 503000 777080 326060 333700 279440 316620 273950 430020 291260 322010 258290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 330570000 11202 3436 10598 21366;21367 17151 17151 1 9606 Homo sapiens -0.01586711508298322 GTALGGGSIR Unmodified 887.48248 0.48247924 1215 D3DPE6;A0A140VJZ9;O43516-2;O43516;O43516-3;Q2YDC4;E9PB87;B4E2B2;A0A8V8TNJ8;B4DVX1 WASPIP;WIPF1 WAS/WASL-interacting protein family member 1 yes no 0 0 0 4.5 3.5 1 1 36.37 36.363 2 0.00036059 8011 20230619_1888_Aki_TMTPro18x_K_F8 129.63 71.029 123300 91791 118110 106640 120570 130550 145920 140250 178860 134250 148980 137750 149710 123160 112570 138130 161000 134830 113910 84198 120400 106870 125750 130430 146630 142420 178980 136190 154160 139240 151040 128330 117920 138330 153400 128190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84813000 11203 1215 10599 21368;21369 17152;17153 17153 2 9606 Homo sapiens 0.034237300949030214 GTAVAICR Unmodified 846.43817 0.43817159 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9;A8K9K1;Q93084-3;Q93084-5;Q93084-6;Q93084-1;Q93084-7;Q93084;Q93084-4 ATP2A2;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 0 0 0 7 0 1 35.637 35.708 2 0.0024133 7595 20230619_1887_Aki_TMTPro18x_K_F7 127.12 76.22 84914 61641 96139 104030 109960 111850 96237 108400 116310 94630 118150 106310 120420 93846 99346 67069 138150 111720 78548 56790 96960 101610 112680 112390 98517 110590 117360 96761 121120 106950 121800 95915 103330 70446 131620 105730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80376000 11204 1076 10600 21370 17154 17154 1 9606 Homo sapiens 0.008810026770561308 GTAVVNGEFK Unmodified 1020.524 0.52400971 1441 A0A384MTR2;P30048-2;P30048;A4UCS5 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes no 0 0 0 7 0 1 45.96 46.048 2 0.00026447 11779 20230619_1887_Aki_TMTPro18x_K_F7 134.57 104 42071 35155 35957 46063 48807 56986 51707 54766 65015 51393 55647 48655 44328 43003 50178 61281 56633 52389 38860 32272 37300 45744 49815 56724 52359 55991 65052 52064 57000 49386 45931 45476 51341 60757 54094 49869 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24755000 11205 1441 10601 21371 17155 17155 1 9606 Homo sapiens 0.0145686606357458 GTAYVVYEDIFDAK Unmodified 1589.7613 0.76133944 4720 Q9Y3B4 SF3B6 Splicing factor 3B subunit 6 yes yes 0 0 0 5.5 0.5 1 1 63.6 63.647 3 6.4595E-06 19775 20230619_1886_Aki_TMTPro18x_K_F6 119.01 106.39 70562 51383 61921 69989 61732 74696 65426 66953 73829 63252 72910 81661 93995 77563 72951 99761 98718 124240 65135 47214 63668 69188 64318 74967 66036 68858 74685 64715 75819 81979 94277 81362 76128 101160 94380 117650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 583330000 11206 4720 10602 21372;21373 17156 17156 1 9606 Homo sapiens -0.00995077304401093 GTCGCGESFNI Unmodified 1200.454 0.45395758 4441 Q9BUE6;Q9BUE6-2;Q5TBE2 ISCA1 Iron-sulfur cluster assembly 1 homolog, mitochondrial yes no 0 0 0 3 0 1 52.865 52.924 2 0.00058239 15478 20230619_1882_Aki_TMTPro18x_K_F3 114.28 106.88 51419 46251 57108 58779 50503 62708 60668 60276 76107 67763 61917 61435 69433 53894 61077 64939 70827 64713 47618 42433 57461 58384 53313 63038 61061 61946 76092 67911 64516 62388 70208 56460 62809 65060 67630 61490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30030000 11207 4441 10603 21374 17157 17157 1 9606 Homo sapiens -0.13825123658853045 GTCGIQYR Unmodified 953.4389 0.43889987 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 0 7 0.816 1 1 1 35.154 35.191 2 0.02701 7376 20230619_1887_Aki_TMTPro18x_K_F7 93.195 58.096 139160 83173 122950 133160 152100 161520 154530 144170 191630 151830 166440 165380 178060 140260 135540 154380 192310 160880 128340 76643 126750 130650 155790 160720 156750 148710 192010 153540 172400 166410 179330 146310 141790 155230 183230 152850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 120510000 11208 2484 10604 21375;21376;21377 17158 17158 1 9606 Homo sapiens -0.039682026738887544 GTCSRPDTECK Unmodified 1309.5391 0.5390842 924 Q9NR56;Q9NR56-5;Q9NR56-2;C9JP00;Q9NR56-6;Q9NR56-7;H7C4T5;A0A0A0MQX8;Q9NR56-3;Q9NR56-4 MBNL1 Muscleblind-like protein 1 yes no 0 0 1 3.5 0.5 1 1 29.833 29.913 3 0.043278 5539 20230619_1883_Aki_TMTPro18x_K_F4 52.693 40.527 9454.1 4405.1 15007 19974 36235 34185 21528 39019 25747 13563 28250 28855 20386 18617 26930 11355 31308 25134 8761 4161.6 15125 19040 35508 33564 22725 38781 26038 15526 28537 28258 21378 19160 27420 12352 29870 23749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17385000 11209 924 10605 21378;21379 17159 17159 1 9606 Homo sapiens -0.10330378193066281 GTCVEGTIPK Unmodified 1060.5223 0.52229515 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8;F5H2X1;B7Z842 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 6 0 1 43.526 43.618 2 0.0053603 11056 20230619_1886_Aki_TMTPro18x_K_F6 89.698 48.711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11210 1601 10606 21380 17160 17160 1 9606 Homo sapiens -0.005545110166849554 GTDDFDFAGSFQGPR Unmodified 1615.6903 0.69029976 2225 B2R5U7;Q03701 CEBPZ CCAAT/enhancer-binding protein zeta yes no 0 0 0 3.5 0.5 1 1 57.689 57.707 2 5.397099999999999E-52 17357 20230619_1883_Aki_TMTPro18x_K_F4 308.55 297.72 38921 31421 34531 39407 32557 43816 40284 45396 45211 44363 43199 41749 52167 39623 41405 59601 48636 57855 35952 28835 35454 39198 34257 43983 40337 46219 45712 44807 44793 42478 52421 42025 42797 59410 46529 54936 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71244000 11211 2225 10607 21381;21382 17161 17161 1 9606 Homo sapiens -0.09291777289217862 GTDDSMTLQSQK Oxidation (M) 1325.5769 0.57690949 1418 A0A384ME24;O00422;O00422-2;H7BZW6 SAP18 Histone deacetylase complex subunit SAP18 yes no 0 1 0 3 0 1 37.81 37.863 3 0.00044748 8709 20230619_1882_Aki_TMTPro18x_K_F3 92.943 77.799 49611 34166 44810 51539 64978 63758 56397 63339 70744 57046 67719 63057 65153 58318 56803 50210 69090 64393 45792 31439 46253 50755 65638 63529 57811 64537 71096 58197 69466 63580 66207 59893 58544 51413 65953 61027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206140000 11212 1418 10608 21383 17162 17162 886 1 9606 Homo sapiens -0.07285588726585956 GTDDSMTLQSQK Unmodified 1309.582 0.58199487 1418 A0A384ME24;O00422;O00422-2;H7BZW6 SAP18 Histone deacetylase complex subunit SAP18 yes no 0 0 0 4 0 1 42.752 42.796 2 3.4798E-08 10747 20230619_1883_Aki_TMTPro18x_K_F4 155.15 138.58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11213 1418 10608 21384 17163 17163 1 9606 Homo sapiens -0.060412848639771255 GTDECAIESIAVAATPIPK Unmodified 1941.9717 0.97174292 1649 P53634;A0A7I2V2Q8;A0A7I2V466;B4DJQ8;A0A7I2V6E3;A0A7I2YQT5 CTSC Dipeptidyl peptidase 1;Dipeptidyl peptidase 1 exclusion domain chain;Dipeptidyl peptidase 1 heavy chain;Dipeptidyl peptidase 1 light chain yes no 0 0 0 4 0.816 1 1 1 62.105 62.133 3 0.031103 19236 20230619_1883_Aki_TMTPro18x_K_F4 45.704 26.629 30841 30141 37723 32820 36291 37434 38481 50021 46920 48930 45674 40514 56481 49540 37736 57540 58641 74246 28605 27604 37694 33028 37838 37805 38974 50141 47309 49243 47334 41864 56444 51268 39970 58555 56013 70285 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 321420000 11214 1649 10609 21385;21386;21387 17164 17164 1 9606 Homo sapiens 0.03843592235489268 GTDIMYTGTLDCWR Oxidation (M) 1703.7283 0.72834153 3388 P05141;Q6NVC0 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes no 0 1 0 5.5 0.5 1 1 55.017 55.089 2 3.4638E-11 16043 20230619_1886_Aki_TMTPro18x_K_F6 172.17 163.17 126630 90853 95926 125590 114110 112450 118840 134740 154000 143990 128450 138030 165890 139640 105270 191840 163730 187370 116770 83500 100430 123760 117250 115230 120640 136320 153960 144860 134620 140520 165310 146770 111830 191400 156250 177930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 476010000 11215 3388 10610 21388;21389 17165;17166 17166 1996 2 9606 Homo sapiens -0.09537350690402491 GTDIMYTGTLDCWR Unmodified 1687.7334 0.73342691 3388 P05141;Q6NVC0 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes no 0 0 0 6.8 0.748 2 2 1 59.728 59.779 2;3 1.4366E-46 17696 20230619_1887_Aki_TMTPro18x_K_F7 375.82 360.68 203080 158980 195900 199880 149030 224700 214590 231830 270970 270230 228560 262660 318390 274630 201690 350360 309270 346110 187670 145910 199010 198860 160830 225330 214360 237270 271340 270870 240530 267420 316720 286900 213910 350150 295130 328650 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 560770000 11216 3388 10610 21390;21391;21392;21393;21394 17167;17168;17169;17170 17170 4 9606 Homo sapiens -0.08293046827770922 GTDRLDLPVTTR Unmodified 1342.7205 0.72047768 1584 A0A8Q3SIN5;D3DVA5;V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF0 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 0 0 1 6.5 0.5 1 1 42.483 42.568 3 6.8594E-06 10574 20230619_1886_Aki_TMTPro18x_K_F6 127.79 92.524 91540 82327 98468 102050 111070 115980 92909 88348 108870 111300 105550 126190 114180 94179 102920 118110 111520 120900 84750 75511 99635 101600 113840 115620 95260 92823 109980 111720 108970 126250 115710 99474 105420 118420 106680 114770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144870000 11217 1584 10611 21395;21396 17171 17171 1 9606 Homo sapiens 0.06282626166648697 GTDSQAMEEEKPEGHV Oxidation (M) 1758.7367 0.73665761 3853 Q53GX4;Q2TA84;Q13451;B7Z8G2;B7Z7Z8 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes no 0 1 1 1.5 0.5 1 1 35.329 35.358 3 1.6708E-06 8109 20230619_1880_Aki_TMTPro18x_K_F1 119.65 111.56 132530 99566 110060 142490 142410 125570 128840 126580 146020 139440 164960 158260 164360 131650 139570 180150 162500 158250 122310 91527 114300 140070 144820 128350 131240 129670 148540 140800 168250 159020 166540 139230 143850 178910 155220 150560 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 281260000 11218 3853 10612 21397;21398 17172;17173;17174 17172 2530 3 9606 Homo sapiens -0.1123612524006603 GTDSQAMEEEKPEGHV Unmodified 1742.7417 0.74174299 3853 Q53GX4;Q2TA84;Q13451;B7Z8G2;B7Z7Z8 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes no 0 0 1 1.5 0.5 1 1 39.318 39.352 3 2.7206E-11 9793 20230619_1880_Aki_TMTPro18x_K_F1 162.29 151.81 219260 173320 184550 197740 184240 205080 201570 203490 236810 254970 257940 261650 264620 228160 235980 270370 288750 262740 202430 158920 190430 197840 192010 206850 203380 209370 240210 255090 263950 264150 268560 238660 243550 270510 275590 249720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 354840000 11219 3853 10612 21399;21400 17175;17176 17175 2 9606 Homo sapiens -0.099918213774572 GTDVASFVK Unmodified 922.476 0.47599688 520 A0A024R8K3;B5BU16;A8K3Y2;P52564-2;P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 yes no 0 0 0 6.5 0.5 1 1 50.481 50.56 2 0.00011629 13820 20230619_1887_Aki_TMTPro18x_K_F7 169.12 114.97 122640 99635 122380 117810 152300 176030 162150 141520 160840 128290 229340 225970 136690 180360 222580 158370 253860 228180 113400 91377 124800 118250 156110 172770 162870 146680 166280 133400 228140 223460 146980 186120 226190 163640 242410 216080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152390000 11220 520 10613 21401;21402 17177 17177 1 9606 Homo sapiens 0.011657921435244134 GTDVREPDDSPQGR Unmodified 1527.6914 0.6913624 4652 Q9UBG0 MRC2 C-type mannose receptor 2 yes yes 0 0 1 1 0 1 30.211 30.211 3 5.4871E-05 6083 20230619_1880_Aki_TMTPro18x_K_F1 104 85.403 19062 13775 24008 17342 38489 32689 24742 27085 31902 29617 39156 34402 37870 34452 35173 27149 45279 37732 17651 12647 24138 17431 38387 31785 25981 28098 32384 29958 39740 34714 38582 35156 36321 28024 43173 35753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42074000 11221 4652 10614 21403 17178 17178 1 9606 Homo sapiens -0.05137562920322125 GTDYQLSK Unmodified 910.43961 0.43961137 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2;A0A0C4DGZ5;A0A6Q8PFX4;A0A6Q8PFC1;A0A6Q8PF15 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 5.5 0.5 1 1 42.866 42.96 2 0.0025016 10770 20230619_1886_Aki_TMTPro18x_K_F6 138.06 79.895 116940 72741 144920 149830 149940 172390 127950 150690 146030 122630 193690 233110 153670 151970 191180 94524 204520 230960 108180 67266 144970 145120 154760 171940 131030 154720 149460 128770 195070 228600 160010 156430 193940 103860 195740 217820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120010000 11222 1102 10615 21404;21405 17179;17180 17180 2 9606 Homo sapiens -0.019190847531717736 GTEAGQVGEPGIPTGEAGPSCSSASDK Unmodified 2545.1238 0.12383948 2230 Q6IAU5;B2R665;O15355;B4DDC8;B3KXL8;Q96IN7 PPM1G Protein phosphatase 1G yes no 0 0 0 3 0 1 46.84 46.918 4 1.2466E-05 12720 20230619_1882_Aki_TMTPro18x_K_F3 89.08 81.183 37854 29154 32624 39124 31415 32151 34907 38317 36623 42823 47961 48645 49682 44880 41702 56173 56080 55866 34950 26777 33590 38596 32811 33186 35075 38844 37687 43192 48748 49016 50300 47000 43419 56205 53516 53066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207450000 11223 2230 10616 21406 17181 17181 1 9606 Homo sapiens -0.0869174833624129 GTEAPAVVTEEEDDDEETAPPVIAPRPDHTK Unmodified 3314.5426 0.54263906 3839 Q13177;A8K5M4 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase yes no 0 0 1 1.5 0.5 1 1 48.415 48.449 4 3.1755E-06 13757 20230619_1881_Aki_TMTPro18x_K_F2 91.1 82.704 13032 12914 9066.5 14073 11607 11667 13221 11622 11148 15174 15084 13888 13395 11684 14219 17598 16801 15767 12036 11827 9608.1 14083 11892 11990 13169 11982 11648 15096 15214 14091 13768 12435 14606 17475 16043 14999 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 408070000 11224 3839 10617 21407;21408 17182 17182 1 9606 Homo sapiens -0.022050554067391204 GTEASSGTEAATGLEGEEK Unmodified 1822.8068 0.80684567 2518 B4DKU3;Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 0 0 0 1.5 0.5 1 1 43.433 43.474 3 1.2027E-24 11444 20230619_1881_Aki_TMTPro18x_K_F2 200.58 186.14 47761 37757 41606 53656 50126 68503 57118 53729 85498 67351 71181 99211 106160 87644 55751 120420 115200 122020 44107 34699 43002 53025 51752 67754 58019 56300 84898 68375 75354 98874 104910 92508 61216 120360 109690 115860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 209340000 11225 2518 10618 21409;21410 17183;17184 17184 2 9606 Homo sapiens -0.07164548370587909 GTEDITSPHGIPLDLLDR Unmodified 1947.9902 0.99017018 1442 B5BUB1;A0A384MTR5;Q9Y265;Q9Y265-2;E7ETR0;B3KRS7;H7C4G5;J3QLR1 RUVBL1 RuvB-like 1 yes no 0 0 0 4 0 1 58.49 58.493 3 1.6023E-14 17678 20230619_1883_Aki_TMTPro18x_K_F4 167.19 148.59 65657 53483 66383 71997 62088 76890 69279 74878 73164 72994 69342 73971 74364 63056 71702 70456 75340 84027 60715 49115 67352 71239 65082 77297 69593 76574 74194 73888 71591 74651 75612 65824 73154 71447 72110 79633 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 342290000 11226 1442 10619 21411 17185 17185 1 9606 Homo sapiens 0.05409470201698241 GTEITHAVVIK Unmodified 1166.6659 0.66592292 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 7.5 0.5 1 1 44.259 44.31 3 0.00018942 11052 20230619_1887_Aki_TMTPro18x_K_F7 112.15 56.764 326970 249460 261550 307990 298660 303520 310240 317020 368220 381080 376160 397130 438920 371190 346320 452170 485300 448160 301710 228940 271920 306160 307630 307670 313960 324660 372390 382170 388370 401570 441710 388040 362010 452550 462730 425840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 843870000 11227 12 10620 21412;21413 17186;17187 17186 2 9606 Homo sapiens 0.08925659085889492 GTELDCGIETDSGVDDDMACHK Oxidation (M) 2439.9465 0.94646874 3580 P42574 CASP3 Caspase-3;Caspase-3 subunit p17;Caspase-3 subunit p12 yes yes 0 1 0 1 0 1 45.777 45.777 3 9.8622E-31 12609 20230619_1880_Aki_TMTPro18x_K_F1 200.99 188.8 28047 29621 28053 25415 29681 27200 38189 42498 40286 40967 31339 29733 44872 29087 29836 50504 33455 31328 25982 27070 28507 26092 30876 27757 38075 42277 40606 41120 33145 30712 44597 31180 30918 49271 31960 29967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40136000 11228 3580 10621 21414 17188 17188 2252 1 9606 Homo sapiens -0.21590663202232463 GTELDCGIETDSGVDDDMACHK Unmodified 2423.9516 0.95155412 3580 P42574 CASP3 Caspase-3;Caspase-3 subunit p17;Caspase-3 subunit p12 yes yes 0 0 0 2 0 1 49.06 49.125 3 1.4161E-23 14035 20230619_1881_Aki_TMTPro18x_K_F2 184.83 180.8 23013 14577 23730 23136 21464 22918 30524 33451 31423 37788 26050 23958 40020 28890 23817 41197 33028 30702 21255 13427 24014 22666 22700 23421 30282 33532 31809 37518 27563 25136 39607 30312 25107 40561 31495 29280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67642000 11229 3580 10621 21415 17189 17189 1 9606 Homo sapiens -0.2034635933964637 GTEPIVVDPFDPR Unmodified 1440.7249 0.72489436 1154 A0A0U1RR39;A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1ZE08 CBL E3 ubiquitin-protein ligase CBL yes no 0 0 0 3.5 0.5 1 1 59.586 59.601 2 0.00031526 18249 20230619_1882_Aki_TMTPro18x_K_F3 103.7 79.357 67242 59699 78820 78288 58017 76754 72513 73732 74949 97510 93588 88670 96255 81069 92774 107190 95875 105490 62298 54791 78800 77518 62356 77629 72418 76173 77060 96961 95241 90186 97973 85273 94657 107150 91769 100170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12888000 11230 1154 10622 21416;21417 17190 17190 1 9606 Homo sapiens 0.022160905895361793 GTEVQVDDIKR Unmodified 1258.6517 0.65172941 4699 Q9Y230;B3KNL2;Q9Y230-2 RUVBL2 RuvB-like 2 yes no 0 0 1 3.5 0.5 1 1 41.208 41.259 3 0.00010574 10108 20230619_1883_Aki_TMTPro18x_K_F4 120.57 78.533 156430 132880 157540 151240 225760 198140 199160 196520 233810 148510 199930 146620 173810 105750 231260 118330 107510 117970 144690 121800 160880 151910 228010 196910 203360 199550 234550 152720 205340 147730 180490 111300 226700 119080 104140 112020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191620000 11231 4699 10623 21418;21419 17191 17191 1 9606 Homo sapiens 0.03274961866918602 GTFCSFDTPDDSIR Unmodified 1616.6777 0.67768617 2675 X5D8S1;H3BRN4;H3BNQ7;B7Z1V4;P80404 ABAT 4-aminobutyrate aminotransferase, mitochondrial yes no 0 0 0 3 0 1 52.349 52.41 2 0.0043849 15215 20230619_1882_Aki_TMTPro18x_K_F3 81.625 64.711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11232 2675 10624 21420 17192 17192 1 9606 Homo sapiens -0.10598556743752852 GTFDNAETK Unmodified 981.44034 0.44033966 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9;Q9NRC3 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3 0 1 40.367 40.424 2 1.6422E-06 9774 20230619_1882_Aki_TMTPro18x_K_F3 134.68 81.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11233 3881 10625 21421 17193 17193 1 9606 Homo sapiens -0.05112290104148087 GTFDNAETKK Unmodified 1109.5353 0.53530267 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9;Q9NRC3 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 6 0 1 39.471 39.559 3 0.0017792 9322 20230619_1886_Aki_TMTPro18x_K_F6 89.301 54.546 154330 70681 179220 176380 246940 229510 211240 224390 218320 187860 272880 282460 248900 211840 263950 102440 281620 233320 142510 65706 180940 169950 249740 227810 215370 228570 224010 194670 276490 279760 255450 215200 268160 112610 268950 220400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 360310000 11234 3881 10626 21422 17194 17194 1 9606 Homo sapiens -0.015083566329622045 GTFPDAR Unmodified 762.36605 0.3660525 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;Q15233-2;A0A7P0MRW0;A0A7I2V4K9 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 4 0.816 1 1 1 36.393 36.457 2 0.003791 8133 20230619_1882_Aki_TMTPro18x_K_F3 152.63 109.63 1620800 1150400 1511400 1489300 1848200 1974800 1752400 1727500 2285700 1840100 2159600 2043400 2235000 1832000 1696800 1942500 2568500 2232400 1496600 1056600 1549300 1482500 1891100 1954400 1788800 1784700 2291900 1861100 2223300 2058400 2253500 1903300 1784100 1965900 2446700 2118500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2135299999.9999998 11235 1112 10627 21423;21424;21425 17195;17196;17197 17195 3 9606 Homo sapiens -0.024635884050098866 GTFQIVYK Unmodified 954.51747 0.51746776 227 O60362;A0A024R388;Q6MZT3;Q9NXG2;B4DFY9 44M2.1;THUMPD1;DKFZp686C1054 THUMP domain-containing protein 1 yes no 0 0 0 3 0 1 53.799 53.851 2 0.00030651 15865 20230619_1882_Aki_TMTPro18x_K_F3 146.27 99.579 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11236 227 10628 21426 17198 17198 1 9606 Homo sapiens 0.03838972902849491 GTGASGSFK Unmodified 810.38718 0.38718187 3461;1927;3462;3463 Q4VB24;A3R0T8;P10412;A3R0T7;B2R984;Q02539;A1L407;P22492;P16401;P16402;P16403 HIST1H1E;HIST1H1A;HIST1H1T;HIST1H1B;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.1;Histone H1t;Histone H1.5;Histone H1.3;Histone H1.2 no no 0 0 0 6.17 2.41 1 1 2 2 38.095 38.115 2;3 0.00013176 8514 20230619_1887_Aki_TMTPro18x_K_F7 126.24 84.263 2418800 992880 3253600 2986400 4401500 5501100 1396200 4504800 1682000 963820 2344500 2080800 1356000 1751000 3235400 478540 2569600 1745700 2236100 927500 3249600 2880600 4405100 5341100 1603800 4565700 1722300 1196800 2332500 2052800 1507700 1748100 3204300 581750 2459400 1647700 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4864500000 11237 1927;3461;3462;3463 10629 21427;21428;21429;21430;21431;21432 17199;17200;17201;17202 17201 4 9606 Homo sapiens -0.025596230961355104 GTGEAEEEYVGPR Unmodified 1392.6157 0.61573784 3871 Q13895;F8WBL2 BYSL Bystin yes no 0 0 0 1 0 1 39.574 39.574 2 1.7201E-10 9884 20230619_1880_Aki_TMTPro18x_K_F1 180.97 158.98 69984 55844 70559 73580 77832 90562 77528 81745 100230 95699 102420 102130 106510 92015 79012 126470 115390 114120 64707 51275 71760 73060 80333 90063 78910 84469 100920 96189 105120 103110 107320 97041 83101 125690 110050 108530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95953000 11238 3871 10630 21433 17203 17203 1 9606 Homo sapiens -0.06486540100581806 GTGGIFEVCWNAAGDK Unmodified 1680.7566 0.75660519 4477 Q9BZK7;C9JLJ1;B7Z475;A0A0D9SFI2 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes no 0 0 0 8 0 1 61.499 61.528 3 0.00059517 18414 20230619_1888_Aki_TMTPro18x_K_F8 74.772 62.795 49881 44237 56945 51623 43586 48561 54797 51637 59121 60227 59514 54724 61036 53102 65186 59925 63649 62414 46201 40553 57025 51520 46610 49421 54759 52784 60012 60240 61098 55761 62447 55199 66097 60270 60905 59259 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48666000 11239 4477 10631 21434 17204 17204 1 9606 Homo sapiens -0.05654284718798408 GTGGVDTAAVGGVFDVSNADR Unmodified 1963.9235 0.92354718 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;H0YJG0 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 0 4 0 1 55.622 55.63 3 5.2796E-24 16469 20230619_1883_Aki_TMTPro18x_K_F4 193.54 176.46 83717 92626 92748 98235 86815 89500 95367 83048 112860 101540 107220 102660 93996 84650 143200 100620 105730 98355 77650 84779 93399 98672 90816 91094 96199 85859 113720 101690 109770 103550 98688 88732 142450 100880 101480 93469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 709990000 11240 3441 10632 21435 17205 17205 1 9606 Homo sapiens -0.019857653602002756 GTGHVSSGYVER Unmodified 1247.5895 0.58946351 4110 Q6IN85;G3V5A2;H0YIY8;G3V5Z3;A0A024R6M2;Q6IN85-5;Q6IN85-4;Q6IN85-2;G3V4R3;G3V231 SMEK1;KIAA2010 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes no 0 0 0 8 0 1 29.073 29.094 3 0.00075218 5345 20230619_1888_Aki_TMTPro18x_K_F8 72.496 49.617 8169.2 5255.7 6454.2 6278.4 7637.3 9436 8010.3 7134.4 9230.6 8153 10593 11344 8583.2 9078.3 8113.8 8368.3 13365 10231 7530.6 4825.4 6717.2 6297.5 7863.2 9246.7 8091.1 7476.7 9380.3 8286.3 10720 11289 8819.4 9393.4 8548.4 8526.2 12715 9709.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7623000 11241 4110 10633 21436 17206 17206 1 9606 Homo sapiens -0.024427644813840743 GTGIVSAPVPK Unmodified 1024.5917 0.59169534 3457 P15880;Q6IPX5;Q3KQT6;H0YEN5;Q8J014;E9PM36;I3L404;E9PQD7;E9PMM9;Q9BSW5 RPS2;rps2 40S ribosomal protein S2 yes no 0 0 0 1.5 0.5 1 1 47.068 47.106 3 0.00033938 13151 20230619_1880_Aki_TMTPro18x_K_F1 99.283 71.801 539500 426020 459540 536160 603450 673800 600710 587200 697880 424910 405620 338170 470150 346650 466660 518730 461940 326520 498140 390990 476140 534040 615710 668800 608490 601500 693170 436120 432430 348250 477420 366410 474570 507660 441090 312670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1779599999.9999998 11242 3457 10634 21437;21438 17207;17208 17207 2 9606 Homo sapiens 0.0803831599437217 GTGIVTR Unmodified 702.40244 0.40243801 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;O00429-5;D3DUW6;B4DYR6;A0A994J696;H0YI79;A0A994J3G1;F8W1W3;B4DDQ3;A0A994J3F1;A0A994J409;B4DPZ9;F8VR28;A0A994J6L3;A0A8V8TQV1;F8VYL3;A0A8V8TRA9;A0A994J691;H0YHY4;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 0 6.5 1.12 1 1 1 1 32.41 32.463 2 0.074385 6291 20230619_1887_Aki_TMTPro18x_K_F7 75.213 5.2142 52102 32426 80887 97549 104960 123470 91886 116360 93052 50678 93593 108740 73109 86694 96979 40197 113180 104320 48326 30215 80251 93333 106730 122540 93519 117570 94543 56536 95264 106940 76583 87636 98759 44932 108070 98436 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69025000 11243 3212;3213 10635 21439;21440;21441;21442 17209 17209 1 9606 Homo sapiens 0.03933288491714393 GTGLLSSDYR Unmodified 1067.5247 0.52473799 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;A0A7P0T8C6;Q7Z2W4-3;Q05DV5 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 0 6 0 1 44.439 44.528 2 0.0069576 11490 20230619_1886_Aki_TMTPro18x_K_F6 85.764 60.946 207860 155160 184430 187930 209470 250360 215080 227790 255190 203070 188020 195950 204110 169480 198330 238210 229010 199040 191920 142380 189720 187930 216010 247840 217770 233500 254960 206430 196860 198440 207580 179300 203680 235970 218610 189580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110940000 11244 2740 10636 21443 17210 17210 1 9606 Homo sapiens -0.006323392874037381 GTGLQPGEEELPDIAPPLVTPDEPK Unmodified 2598.3065 0.30647852 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 3.5 0.5 1 1 62.484 62.501 4 0.010274 19401 20230619_1883_Aki_TMTPro18x_K_F4 55.994 47.807 10714 9312.8 14629 15692 12759 13333 14541 15430 17822 13961 15795 15931 15779 16413 15739 16228 14101 19981 9940.9 8573.7 14513 15285 13436 13703 14666 15583 17874 14255 16303 16104 16121 16896 15921 16520 13548 18917 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65769000 11245 1213 10637 21444;21445 17211 17211 1 9606 Homo sapiens 0.07125754068101742 GTGSGLIGASGATMPTDTSK Unmodified 1807.8622 0.86219247 3901 Q14781 CBX2 Chromobox protein homolog 2 yes yes 0 0 0 8 0 1 50.389 50.465 3 0.010116 13690 20230619_1888_Aki_TMTPro18x_K_F8 56.708 47.425 44788 35550 33378 40601 38475 48948 43518 37114 43541 47574 51659 50193 52876 45252 44405 52914 46816 54549 41319 32596 34986 40685 39769 48585 43575 39036 44697 47607 52658 50676 53518 47249 45487 53119 44824 51765 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19991000 11246 3901 10638 21446 17212;17213 17212 2 9606 Homo sapiens -0.009424133838592752 GTGVIQLYEIQHGDLK Unmodified 1769.9312 0.93119874 4201 Q86YQ0;A0A140VK67;Q96MX6-2;Q96MX6;Q6QHF3 HZGJ;WDR92 WD repeat-containing protein 92 yes no 0 0 0 7 0 1 55.549 55.61 3 1.3108E-14 16005 20230619_1887_Aki_TMTPro18x_K_F7 180.64 152.35 75275 64202 76038 78062 66874 80842 76720 72329 77008 92151 92982 96548 101870 88992 93420 104630 108060 112070 69629 58887 77058 77738 70490 81338 76833 75039 79151 92184 95071 97552 103300 92877 96014 105280 103280 106350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43594000 11247 4201 10639 21447 17214 17214 1 9606 Homo sapiens 0.07703038698014097 GTGVVTSVPSDSPDDIAALR Unmodified 1955.98 0.97999942 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRU9 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 3.5 0.5 1 1 54.379 54.41 3 4.5285E-12 16122 20230619_1882_Aki_TMTPro18x_K_F3 142.88 132.06 52580 42103 56858 69497 61116 59804 64831 70066 64256 67121 71672 69910 69301 52968 69336 71096 63272 65659 48646 38763 57536 67764 63153 61429 65167 70799 65808 68034 73085 70289 70748 56171 70183 70849 60613 62412 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1246600000 11248 1603 10640 21448;21449 17215;17216 17215 2 9606 Homo sapiens 0.04024862476467206 GTHNFHNFTSQK Unmodified 1416.6535 0.65346075 693 A0A024RBS6;F5H1S9;G8JLB3;E5KMT6;E5KMT5;Q9Y606-2;Q9Y606 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial yes no 0 0 0 2 0 1 34.569 34.626 4 2.3961E-05 7518 20230619_1881_Aki_TMTPro18x_K_F2 128.57 103.71 39255 8021.4 33161 34925 45702 35118 40543 41090 49725 30257 33866 26447 30505 24529 30118 29869 33868 26944 36082 7629.4 34371 33015 46247 35613 41447 41272 49447 31073 35297 26997 31224 25655 30835 29770 32320 25648 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38250000 11249 693 10641 21450 17217 17217 1 9606 Homo sapiens -0.03819984324445613 GTHTGVWVGVSGSETSEALSR Unmodified 2116.0185 0.018510196 3606 P49327;A0A0U1RQF0;A0A0U1RRG3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 6 0 1 45.885 45.971 3 2.4039E-37 12093 20230619_1886_Aki_TMTPro18x_K_F6 178.32 154.84 23548 14023 23939 25014 16669 22001 22346 22624 25562 29726 29850 26627 30079 25124 26755 32338 28075 30205 21740 12942 24185 24305 18072 22467 22319 23264 26045 29560 30410 27136 30527 26351 27371 32245 26864 28703 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 449290000 11250 3606 10642 21451 17218 17218 1 9606 Homo sapiens 0.00514168110976243 GTIEILSDVQLIK Unmodified 1427.8235 0.82354577 691 P05388;A8K4Z4;A0A024RBS2;F8VU65;Q53HW2;Q53HK9;F8VPE8;F8VW21;Q8NHW5;B4E3D5 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 6.5 0.5 1 1 63.507 63.547 3 4.1778E-05 19452 20230619_1887_Aki_TMTPro18x_K_F7 113.77 91.536 86215 40097 69369 54716 50267 61367 76161 71011 75022 68814 82753 53860 81215 79292 75414 83757 73247 81764 79377 36933 71503 54190 54488 61739 75274 71807 76735 69246 84285 56383 82716 81164 76720 83967 70162 77649 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284740000 11251 691 10643 21452;21453 17219 17219 1 9606 Homo sapiens 0.12674693834605932 GTIEINPR Unmodified 898.48723 0.48723027 1489 A0A384P5L2;Q08257;Q08257-3;Q08257-2 CRYZ Quinone oxidoreductase yes no 0 0 0 4.5 0.5 1 1 39.892 39.958 2 0.010693 9489 20230619_1885_Aki_TMTPro18x_K_F5 105.57 45.768 136790 104380 110760 136710 199290 175920 189190 192990 239280 153230 215090 212040 192280 178570 198430 188590 213550 207260 126230 95852 116150 135900 199500 175370 192760 194870 239590 158910 220820 211560 197380 185740 202450 190460 204130 196690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138870000 11252 1489 10644 21454;21455 17220 17220 1 9606 Homo sapiens 0.03392614237657199 GTILISSEEGETEANNHK Unmodified 1927.9123 0.91231379 1535 B3KMZ6;B2RDF5;A0A3R5W301;Q9UBT2;Q9UBT2-2;B3KNA3;U3KQ93;K7ESK7 UBA2 SUMO-activating enzyme subunit 2 yes no 0 0 0 3 0 1 44.624 44.697 3 5.3922E-97 11691 20230619_1882_Aki_TMTPro18x_K_F3 331.48 318.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11253 1535 10645 21456 17221 17221 1 9606 Homo sapiens -0.014525874542869133 GTINFLHADCDK Unmodified 1389.6347 0.63469914 1425 A0A8I5KU76;A0A384MEE7;Q9BS26;A0A8I5KW59 ERP44 Endoplasmic reticulum resident protein 44 yes no 0 0 0 5.5 0.5 1 1 48.147 48.225 3 1.7331E-05 13117 20230619_1886_Aki_TMTPro18x_K_F6 109.84 78.199 623180 543300 577690 637180 692190 776750 744800 739100 863930 813070 867420 816760 877690 732490 829680 957430 881000 922120 576120 498100 592790 637640 711630 774020 751490 759510 873440 818000 889950 826640 893100 770310 848090 956160 842730 876060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 484350000 11254 1425 10646 21457;21458 17222;17223 17223 2 9606 Homo sapiens -0.04453282010535986 GTIPDMIADSGK Oxidation (M) 1219.5755 0.57545293 3858 Q13564-3;Q13564-2;Q13564;Q13564-4 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes no 0 1 0 4 0 1 48.306 48.346 3 0.0018269 13184 20230619_1883_Aki_TMTPro18x_K_F4 73.435 57.89 279760 214410 251900 273440 238800 302960 269010 269950 350470 275620 298490 354400 355520 316680 295980 374640 378430 438390 258370 196830 258170 271640 250410 303240 272020 278290 350160 280850 311530 354900 358420 330960 307010 378850 361700 415490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138070000 11255 3858 10647 21459 17224;17225 17224 2534 2 9606 Homo sapiens -0.02555178024704219 GTIPDMIADSGK Unmodified 1203.5805 0.58053831 3858 Q13564-3;Q13564-2;Q13564;Q13564-4 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes no 0 0 0 5.5 0.5 1 1 55.837 55.906 3 0.00020112 16170 20230619_1885_Aki_TMTPro18x_K_F5 97.779 70.037 86049 68079 78138 90035 79890 92778 89482 90497 107910 101720 92170 104660 115520 93047 98201 128500 116030 121510 79490 62514 80138 89135 83180 93536 90235 92918 108310 102310 96411 105730 116330 98253 101320 128070 110880 115470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133600000 11256 3858 10647 21460;21461 17226;17227 17226 2 9606 Homo sapiens -0.013108741620953879 GTIQVITQGTSLK Unmodified 1344.7613 0.76127986 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 2.5 0.5 2 2 53.901 53.941 2;3 6.6504E-08 15910 20230619_1882_Aki_TMTPro18x_K_F3 153.39 129.41 377400 309330 307260 339900 348380 382990 292060 312260 376670 402880 453670 638300 412270 397190 612370 456050 512010 640090 348440 283490 318680 341340 357460 382540 300600 326450 382170 409290 461700 628300 431790 420630 612810 468110 491740 605540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4197199999.9999995 11257 1334 10648 21462;21463;21464;21465 17228;17229;17230 17229 3 9606 Homo sapiens 0.10268967486285874 GTITVSAQELK Unmodified 1145.6292 0.62920306 2180 Q99829;B0QZ18;F2Z2V0;A6PVH9;E7ENH5;Q5JX58;Q5JX59;Q5JX60;Q5JX44;Q5JX56;Q5JX55;Q5JX54 CPNE1 Copine-1 yes no 0 0 0 7.33 0.471 2 1 49.936 50.013 2;3 7.2192000000000004E-34 13578 20230619_1887_Aki_TMTPro18x_K_F7 285.28 211.62 255140 194840 261090 259400 257900 256800 269780 274980 244920 415870 504700 529790 542960 439180 396690 514920 590770 570430 235860 178950 264620 256660 268100 260380 270900 283470 261840 415790 507260 529550 545880 460120 417300 518970 563230 541290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 244370000 11258 2180 10649 21466;21467;21468 17231;17232 17232 2 9606 Homo sapiens 0.06221362469318592 GTLDAVLTDEEEK Unmodified 1418.6777 0.67766939 2358 B3KNM8;B4E2X3;C4B4C6;B3KNI0;Q8N6R0-1;Q8N6R0-3;Q8N6R0-4;Q8N6R0;Q8N6R0-2 feat;METTL13 Methyltransferase-like protein 13 yes no 0 0 0 1 0 1 56.601 56.601 2 1.1974E-27 17084 20230619_1880_Aki_TMTPro18x_K_F1 230.41 169.85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11259 2358 10650 21469 17233 17233 1 9606 Homo sapiens -0.014922334720949948 GTLDPVEK Unmodified 857.44945 0.44944778 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;P11142-2;Q53HF2;B4E1Q1;A8K7Q2;E9PN89 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 0 0 4.44 2.06 2 2 1 1 1 1 1 44.617 44.687 2;3 0.00025826 11678 20230619_1882_Aki_TMTPro18x_K_F3 168.08 131.06 4314200 3223200 3749900 4022700 4814400 4889100 4613600 4493800 5832400 5207400 5482000 4927800 5956800 4693600 4594200 5253600 6195000 5004900 3982700 2958600 3873400 4008000 4911000 4870200 4700000 4636600 5858400 5218500 5656200 5009000 5998700 4880800 4786900 5255200 5903600 4760700 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 8342599999.999999 11260 3430 10651 21470;21471;21472;21473;21474;21475;21476;21477;21478 17234;17235;17236;17237;17238;17239;17240 17235 7 9606 Homo sapiens 0.015021032521985944 GTLEQWIEK Unmodified 1102.5659 0.56587452 1711 A0A7P0TAL9;A0A7P0TBA9;B7ZKK7;P19525-2;P19525;Q8IW76;A0A7P0Z4M0;Q05CP4;Q6PK38 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes no 0 0 0 6.5 0.5 1 1 59.492 59.545 3 0.0043634 17641 20230619_1887_Aki_TMTPro18x_K_F7 75.294 42.069 21767 17332 18970 20400 20999 22318 20880 21202 28717 22654 19610 20583 25822 18974 19777 25567 23824 23719 20102 15896 19540 20378 21663 22403 21298 21774 28448 22770 20821 20938 25857 19988 20471 25466 22755 22549 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60986000 11261 1711 10652 21479;21480 17241 17241 1 9606 Homo sapiens 0.018694217520987877 GTLIDNQFK Unmodified 1034.5397 0.53965977 2818 D3DSW1;Q9H5V9-2;Q9H5V9-3;Q9H5V9 hCG_1640171;CXorf56 UPF0428 protein CXorf56 yes no 0 0 0 8 0 1 50.879 50.956 3 0.038404 13928 20230619_1888_Aki_TMTPro18x_K_F8 53.089 29.769 68989 52130 64644 70904 63487 78808 79623 76183 83496 80464 83198 75666 88860 73997 77101 93913 89931 83286 63729 47892 66070 70150 66536 78992 79460 78129 84826 80957 85571 77039 89953 77436 79408 93414 85875 79243 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17379000 11262 2818 10653 21481 17242 17242 1 9606 Homo sapiens 0.023771525806068894 GTLITHCYK Unmodified 1091.5434 0.54336494 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 2 0 1 40.544 40.618 3 0.0013978 10091 20230619_1881_Aki_TMTPro18x_K_F2 92.838 78.419 219090 152300 197530 198980 229450 254210 246600 231280 260990 159930 146960 140760 150040 124260 180090 171560 188420 138860 202230 139900 202960 197820 236310 252280 247960 235960 260260 165060 156360 143340 154530 131210 182990 169850 179850 132420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133240000 11263 2332 10654 21482 17243 17243 1 9606 Homo sapiens 0.0012549908281016542 GTLPAVEPFQR Unmodified 1213.6455 0.64552182 3426 P0DPB6;A0A0R4J2F3 yes no 0 0 0 7.5 0.5 1 1 51.294 51.371 2 0.00028431 14173 20230619_1887_Aki_TMTPro18x_K_F7 121.93 67.156 52599 44883 52553 53416 57455 59304 56618 56956 67705 57194 67060 65925 74915 53996 66050 72369 66949 74630 48650 41158 53460 53333 59249 59486 57490 58360 68293 58071 69166 66165 75717 57107 67408 72533 64101 70832 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53968000 11264 3426 10655 21483;21484 17244 17244 1 9606 Homo sapiens 0.04724488426086282 GTLSDEHAGVISVLAQQAAK Unmodified 1994.0433 0.043268383 3258 O43504;R4GMU8;E9PLX3;A0A8Z5A536 LAMTOR5 Ragulator complex protein LAMTOR5 yes no 0 0 0 8 0 1 55.666 55.728 3 3.3756E-17 16054 20230619_1888_Aki_TMTPro18x_K_F8 168.69 159.86 62992 57920 64032 67714 58866 66353 70791 63702 64828 78060 69817 76596 76250 67489 72878 82208 76540 90943 58300 53090 64909 67575 61849 67155 70512 65679 66665 78048 71746 77484 77475 70706 74426 82832 73297 86233 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32783000 11265 3258 10656 21485 17245 17245 1 9606 Homo sapiens 0.08600847984394022 GTLSGWILSK Unmodified 1060.5917 0.59169534 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;A0A7P0Z484;A0A7P0TAR9;A0A7P0Z4H2;Q16094;A0A7P0TAN9;A0A7P0T8N1;D6RAU8;D6RAQ8 CANX Calnexin yes no 0 0 0 4 0.816 1 1 1 61.766 61.793 3 4.3918E-05 18670 20230619_1885_Aki_TMTPro18x_K_F5 140.17 100.55 620750 537980 560890 598540 499610 625820 680920 654650 783020 668620 622970 656330 668550 529130 703710 751370 681080 736700 573740 493000 574230 600100 529450 631380 679030 667250 785260 674710 649150 662600 682360 561960 714000 750480 652250 699670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1107600000 11266 1700 10657 21486;21487;21488 17246;17247 17247 2 9606 Homo sapiens 0.06382315994369492 GTLTEAFPVLGGK Unmodified 1288.7027 0.70270235 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 1.5 0.5 1 1 61.7 61.705 3 0.0017491 19217 20230619_1880_Aki_TMTPro18x_K_F1 75.479 51.187 36871 28153 34547 40846 36449 41391 33064 39004 40551 46133 43387 43786 48301 37534 45610 50999 44272 44516 34062 25883 35348 40192 37648 41745 33798 40191 41050 46156 44602 44350 48983 39645 46383 50656 42374 42349 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284770000 11267 1552 10658 21489;21490 17248 17248 1 9606 Homo sapiens 0.06989910911784136 GTLTLCPYHSDR Unmodified 1418.6612 0.66124824 3840 Q59EG8;Q13200;B4DM22;Q13200-3;Q13200-2;Q13041 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 7 0.816 1 1 1 41.458 41.513 3 1.4467E-13 9852 20230619_1887_Aki_TMTPro18x_K_F7 211.26 190.03 151990 107970 143220 155410 164860 179600 171920 179800 195910 173860 169200 171880 175150 153060 156580 178310 183240 166200 140360 99279 146620 153320 169740 179730 173680 183470 197160 175990 175140 173940 177750 159810 161130 178060 174940 158050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 430240000 11268 3840 10659 21491;21492;21493 17249;17250 17249 2 9606 Homo sapiens -0.03133593119196121 GTLVQTK Unmodified 745.4334 0.43340378 3461;1927;3462;3463 Q4VB24;A3R0T8;P10412;B2R984;Q02539;P16401;P16402;P16403 HIST1H1E;HIST1H1A;HIST1H1B;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.1;Histone H1.5;Histone H1.3;Histone H1.2 no no 0 0 0 4.2 2.79 1 1 1 1 1 40.299 40.337 2 0.002418 10180 20230619_1880_Aki_TMTPro18x_K_F1 161.9 85.052 2410400 1076100 2966600 2339600 3017100 5041200 893170 4758400 1002200 1264900 2499300 2357400 1745000 1355900 1764800 807130 2636000 1926500 2226700 997960 2963900 2293200 3086500 4876600 1043000 4772900 1075600 1493500 2459400 2311600 1804800 1351800 1836500 885850 2508800 1820500 4 4 4 4 4 4 4 4 4 4 4 4 4 3 4 4 4 4 9276400000 11269 1927;3461;3462;3463 10660 21494;21495;21496;21497;21498 17251;17252;17253;17254 17251 4 9606 Homo sapiens 0.05050441805963146 GTMDDISQEEGSSQGEDSVSGSQR Oxidation (M) 2501.0096 0.009597586 1432 G8JLG1;A0A384MR33;Q14683;A0A6Q8PHC3;V9GY57 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 1 0 1 0 1 37.504 37.504 3 1.7999000000000001E-63 8997 20230619_1880_Aki_TMTPro18x_K_F1 278.45 271.34 24546 16594 18454 23591 24523 28267 25758 25605 23633 26640 33705 27835 25431 27506 26042 29533 29265 30545 22626 15260 19379 23295 25040 28156 25837 26369 24594 26901 33708 28221 26284 28466 26670 29695 27979 28997 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 95365000 11270 1432 10661 21499 17255;17256 17256 913 2 9606 Homo sapiens -0.18086682888952055 GTMDDISQEEGSSQGEDSVSGSQR Unmodified 2485.0147 0.014682964 1432 G8JLG1;A0A384MR33;Q14683;A0A6Q8PHC3;V9GY57 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 1 0 1 42.434 42.434 3 1.8588E-63 11180 20230619_1880_Aki_TMTPro18x_K_F1 281.16 273.49 25248 17286 21083 18879 13684 19560 19930 21250 26390 23669 28433 26842 28020 25235 24296 31505 30173 25880 23291 15852 21642 18962 15024 19761 19947 21653 26577 23894 29041 27074 28448 26396 25135 31226 28782 24656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138920000 11271 1432 10661 21500 17257 17257 1 9606 Homo sapiens -0.1684237902636596 GTMDPALR Oxidation (M) 875.4171 0.41710179 3354 O95373;E9PLJ0 IPO7 Importin-7 yes no 0 1 0 3 0.816 1 1 1 32.593 32.655 2 0.0083889 6600 20230619_1882_Aki_TMTPro18x_K_F3 97.093 60 105380 71304 106620 103300 138180 126110 108540 126610 124520 110670 145520 136370 125430 113780 134150 125170 141430 120090 97347 65586 108610 101990 140040 125840 111750 128820 126730 113470 147400 136580 129110 118640 136600 125370 135100 114190 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 171710000 11272 3354 10662 21501;21502;21503 17258 17258 1960 1 9606 Homo sapiens -0.025590074224510317 GTMIPSEAPLLHR Unmodified 1420.7497 0.74966932 4320 Q96A35;X6RJ73 MRPL24 39S ribosomal protein L24, mitochondrial yes no 0 0 0 8 0 1 48.436 48.503 3 0.022178 12878 20230619_1888_Aki_TMTPro18x_K_F8 56.938 21.396 56062 43978 47519 52929 53152 62874 55898 59930 91892 42242 47079 42198 44701 33194 54073 40827 37964 40594 51760 40345 49105 52848 54965 62741 57277 60943 89612 43739 50285 42567 46112 34964 53859 40938 36498 38549 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32762000 11273 4320 10663 21504 17259 17259 1 9606 Homo sapiens 0.056124471912880836 GTMTTGHNVADLVVILK Unmodified 1767.9553 0.955305 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63;X6R6Z1;A0A0A0MRL0 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 2 0 1 60.41 60.422 4 0.00015593 18779 20230619_1881_Aki_TMTPro18x_K_F2 90.754 68.599 40030 29696 32644 36688 32319 38030 35872 34250 43922 34497 32263 38493 37432 29683 33815 40678 34288 39942 36937 27257 33796 36490 33742 38263 36205 35274 43810 34990 33921 38586 37859 31496 34516 40638 32841 37924 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65671000 11274 2621 10664 21505 17260 17260 1 9606 Homo sapiens 0.10204555860036635 GTMVTIEGPR Oxidation (M) 1075.5332 0.53319418 1161;3805 Q13126-2;Q13126-3;B4DUC8;A0A384ME80;Q13126;Q13126-4;A0A140CZL4;J3QSB7;Q6FHT1;Q6FHP1;A0A140CZL5;Q13126-7;Q13126-6;Q13126-5;A0A140CZL6;Q05DJ2 MTAP S-methyl-5'-thioadenosine phosphorylase;Purine nucleoside phosphorylase no no 0 1 0 5 0 1 39.08 39.172 2 0.00054239 9167 20230619_1885_Aki_TMTPro18x_K_F5 118.41 105.43 87459 64005 74936 81705 85106 92530 91640 87663 104650 94777 107230 102360 110860 90497 93757 122750 111270 119620 80721 58769 77360 81193 87801 92633 92412 90096 105940 95659 110010 103250 112210 95457 96772 122570 106350 113620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104750000 11275 1161;3805 10665 21506 17261 17261 712 1 9606 Homo sapiens -0.0015510864241150557 GTNEALLR Unmodified 872.47158 0.4715802 2433 B3KWQ6;P41219;P41219-2;H7C5W5 PRPH Peripherin yes no 0 0 0 4 1 1 1 37.651 37.744 2 0.00021031 8694 20230619_1882_Aki_TMTPro18x_K_F3 131.41 40.344 219430 158760 188620 197350 214990 221500 211450 213210 256010 237850 293570 291300 268400 252140 282600 275340 343220 299580 202520 145740 194580 196470 221150 222010 214840 219060 259660 240730 298360 292020 275630 262500 290400 277730 327510 284440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 378690000 11276 2433 10666 21507;21508 17262;17263 17262 2 9606 Homo sapiens 0.030243277206295716 GTNESLER Unmodified 904.42502 0.42502394 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5;P14136-2;P14136-3;P14136;A0A1X7SBR3;B4E192;B4DJW0;A0A1W2PR46;A0A1W2PRT3 VIM;HEL113;GFAP Vimentin;Glial fibrillary acidic protein yes no 0 0 0 2 0 1 29.891 29.96 2 0.0048852 5701 20230619_1881_Aki_TMTPro18x_K_F2 115.13 46.751 21364 11287 29794 23184 83061 83825 47714 58507 44848 25750 57789 63315 37759 44395 57919 13829 63321 55825 19776 10446 30320 23192 81015 79548 50083 60559 46283 28949 57882 61881 40211 44780 58585 16891 60481 52605 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54183000 11277 3414 10667 21509 17264 17264 1 9606 Homo sapiens -0.031011569013230655 GTNIQENEYVK Unmodified 1293.6201 0.62009493 59 A0A024QZR3;B3KPC1;Q9BRX2 hCG_2002731;PELO Protein pelota homolog yes no 0 0 0 4 0 1 43.77 43.814 3 4.4564E-05 11203 20230619_1883_Aki_TMTPro18x_K_F4 118.48 90.622 59165 51860 48986 57739 64959 76683 72895 65043 96030 68219 64133 65626 81093 56529 62697 82123 79267 68808 54655 47521 50921 58070 66522 75835 73676 67344 95190 68771 68036 66460 81301 60004 65094 81311 75609 65533 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59021000 11278 59 10668 21510 17265 17265 1 9606 Homo sapiens -0.014970308870033477 GTNSYYK Unmodified 831.37628 0.37628284 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 7.5 0.5 1 1 38.307 38.332 2 0.0052455 8791 20230619_1888_Aki_TMTPro18x_K_F8 142.36 97.831 147960 55743 222180 224810 403670 399930 250880 349420 204740 99633 221060 257040 152810 178640 304410 52491 255320 209320 136920 52533 222190 215020 400140 389570 260710 353420 211480 118870 223640 251000 165600 180070 302720 64416 244450 197320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136400000 11279 261 10669 21511;21512 17266;17267 17267 2 9606 Homo sapiens -0.04615025470434375 GTNTSSPYDAGADYLR Unmodified 1686.7485 0.74854293 4249 Q8ND82;Q9UJJ2 ZNF280C Zinc finger protein 280C yes no 0 0 0 4 0 1 47.224 47.266 2 3.4464E-08 12723 20230619_1883_Aki_TMTPro18x_K_F4 141.38 128.59 25070 18810 23836 19783 21088 24015 24114 21898 19333 29091 29183 29818 34656 29745 23687 33163 33714 41347 23160 17238 24250 19974 22196 23923 24007 22712 20406 29022 29714 30235 34680 30882 24887 33696 32213 39157 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31121000 11280 4249 10670 21513 17268 17268 1 9606 Homo sapiens -0.06736140434577464 GTNVNQLNYR Unmodified 1177.584 0.5839842 1391 Q504W7;A0A2X0TVZ9;Q01968-2;Q01968;A0A2R8YCN4;A0A2R8YG38 OCRL Inositol polyphosphate 5-phosphatase OCRL-1 yes no 0 0 0 8 0 1 38.279 38.265 2 9.7376E-08 8793 20230619_1888_Aki_TMTPro18x_K_F8 192.92 160.98 30214 25620 26652 35154 44848 46676 40763 34321 53212 19768 27209 19580 15913 14816 28945 18300 25144 19245 27918 23529 27698 34835 45040 46036 41665 35551 52340 20832 28613 19765 17239 15620 28934 18422 24054 18290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39254000 11281 1391 10671 21514 17269 17269 1 9606 Homo sapiens 0.002295567267765364 GTPCERPVR Unmodified 1070.5291 0.52911186 2732 C9J050;C9JEJ2;P49585;D3DXB2;B4E322;B2R8P1;H7C1T3;C9J2E1;C9JPY0;C9JVS0;F8WAZ5 PCYT1A;hCG_2002711 Choline-phosphate cytidylyltransferase A yes no 0 0 1 5.5 0.5 1 1 24.718 24.77 3 0.003028 3871 20230619_1885_Aki_TMTPro18x_K_F5 81.263 64.238 55890 25036 66224 66456 110250 117290 99424 106650 101130 65995 90620 101960 87115 81358 89662 40952 117750 100140 51613 23307 67093 64287 110660 114390 100900 108540 102390 70012 93422 101070 89222 82504 92388 45287 112260 94550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46867000 11282 2732 10672 21515;21516 17270;17271 17270 2 9606 Homo sapiens -0.003331533454684177 GTPEQPQCGFSNAVVQILR Unmodified 2100.0422 0.042222526 1405 A0A384MDT9;Q86SX6 GLRX5 Glutaredoxin-related protein 5, mitochondrial yes no 0 0 0 1 0 1 61.511 61.511 3 1.233E-60 19071 20230619_1880_Aki_TMTPro18x_K_F1 302.44 281.69 35557 32690 37077 40332 30341 36294 41005 42582 40629 46275 43198 42868 49561 38206 43162 55606 50088 50660 32916 29980 37462 40059 32340 37146 40733 43164 41549 46442 44480 43539 50056 40501 44455 55282 47861 48168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 375580000 11283 1405 10673 21517 17272 17272 1 9606 Homo sapiens 0.03620310343831079 GTPFETPDQGK Unmodified 1175.5459 0.54586736 168;1280 A0A024R1W6;Q8N138-4;Q8N138;J3KTF9;J3QRM9;F8VXD5;F6WST4;A0A1B0GXE7;Q9P0S3;Q53FV1 ORMDL3;ORMDL2;ORMDL1 ORM1-like protein 3;ORM1-like protein 1;ORM1-like protein 2 no no 0 0 0 4 0 1 45.702 45.746 2 5.4705E-11 12042 20230619_1883_Aki_TMTPro18x_K_F4 158.79 112.79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11284 168;1280 10674 21518 17273 17273 1 9606 Homo sapiens -0.03488373978552772 GTPGPDSSGSLGSGEFTGVK Unmodified 1835.8537 0.85373628 449 A5PKY0;A0A024R7G6;M0R165;A8K5P4;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2;B4DQX5;B4DME4 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 5.5 0.5 1 1 51.129 51.205 3 2.1906E-22 14432 20230619_1886_Aki_TMTPro18x_K_F6 176.94 160.8 32739 28900 29493 31920 27730 35228 32657 33641 35562 35831 35510 39141 34185 30628 38352 37121 28357 35526 30263 26480 30224 32040 29120 35333 32742 34535 36069 36188 36417 39280 35125 32204 38372 37119 27278 33733 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165290000 11285 449 10675 21519;21520 17274 17274 1 9606 Homo sapiens -0.03075644028831448 GTPKPSEGTPAPR Unmodified 1293.6677 0.66771383 1695 A0A7P0T8A6;H0Y6J8;A0A7P0Z4L3;B0QY86;B0QY91;A0A7P0T9P2;Q8N3F8 MICALL1 MICAL-like protein 1 yes no 0 0 1 7 0 1 32.983 33.07 3 0.010776 6546 20230619_1887_Aki_TMTPro18x_K_F7 68.034 52.872 26074 18738 29219 30572 32023 28333 30211 29194 36803 31380 32552 23630 25282 18423 33054 12306 28244 14408 24116 17256 29460 29859 32936 28845 30773 29830 36934 31367 33233 24150 26374 18878 33086 12658 26974 13713 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11050000 11286 1695 10676 21521 17275 17275 1 9606 Homo sapiens 0.032626681038664174 GTPLDTEVPMER Unmodified 1343.6391 0.63911582 332 A0A024R5C5;P11498 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 2.5 0.5 1 1 48.126 48.201 2 9.3557E-13 13605 20230619_1881_Aki_TMTPro18x_K_F2 205.18 162.58 129940 106240 122500 124800 113460 135680 118310 131070 144080 157550 175010 173930 168160 155270 174680 183030 188130 194800 120100 97427 124930 124680 118840 136260 119920 134900 146600 158280 177820 175220 172240 162200 178300 184130 179920 184870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133150000 11287 332 10677 21522;21523 17276;17277 17276 2 9606 Homo sapiens -0.018958175876150563 GTPPLTPSDSPQTR Unmodified 1452.7209 0.72087161 4115 Q6NZY4;A8K559;Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes no 0 0 0 5 0 1 39.639 39.729 2 0.0033358 9400 20230619_1885_Aki_TMTPro18x_K_F5 83.397 59.968 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11288 4115 10678 21524 17278 17278 1 9606 Homo sapiens 0.01262001095847154 GTPPPVFTPPLPK Unmodified 1346.7598 0.7598233 4115 Q6NZY4;A8K559;Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes no 0 0 0 3 0 1 58.343 58.373 3 0.0018261 17759 20230619_1882_Aki_TMTPro18x_K_F3 74.46 59.794 36383 31722 45931 41265 46480 49765 50749 49369 48720 45847 45347 36998 38881 30281 49099 37177 35875 34460 33729 29113 45847 41012 48293 49666 50868 50358 49612 46248 46374 37752 40337 31841 48952 37140 34443 32765 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21662000 11289 4115 10679 21525 17279 17279 1 9606 Homo sapiens 0.10031378188159579 GTPQDLAR Unmodified 856.44028 0.44028008 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 3.5 0.5 1 1 34.248 34.304 2 0.0025096 7283 20230619_1882_Aki_TMTPro18x_K_F3 125.58 81.053 85746 41443 93192 93923 146040 155760 106700 117330 131500 73132 114550 116950 91058 95735 127430 48703 127480 110280 79141 38441 94833 91215 146440 151810 110650 121290 131660 77741 117380 115950 95537 96948 128490 53419 121850 104150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92205000 11290 1292 10680 21526;21527 17280;17281 17280 2 9606 Homo sapiens 0.0063175468651479605 GTPQQIDYAR Unmodified 1147.5622 0.56218613 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 4.5 0.5 1 1 37.971 38.039 2 4.4532E-05 8691 20230619_1883_Aki_TMTPro18x_K_F4 147.75 112.46 316100 240990 255080 293110 352950 396610 339900 337040 388310 348070 393460 366610 415090 331360 329360 446970 455600 376050 291700 221130 265920 293010 358770 391810 344900 348660 392990 351880 404110 370490 418870 349060 344010 443000 434150 358210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1520299999.9999998 11291 2644;4322 10681 21528;21529 17282;17283 17282 2 9606 Homo sapiens -0.005692480217703633 GTPSQSPVVGR Unmodified 1083.5673 0.5672715 1082 B8ZZY2;A0A0S2Z444;A0A0S2Z3Y3;A0A0S2Z3Z1;A0A0S2Z462;P52594-2;P52594-3;P52594;P52594-4;C9J2I0;B4DHC5;A0A024R458 AGFG1;HRB Arf-GAP domain and FG repeat-containing protein 1 yes no 0 0 0 7 0 1 33.517 33.599 2 4.8623E-08 6760 20230619_1887_Aki_TMTPro18x_K_F7 169.92 125.48 43243 17490 36179 43371 20950 29786 35842 31764 40426 46075 64760 68608 67270 56890 58124 36239 75093 66741 39805 16271 37160 41441 23440 31139 35443 32752 41868 46471 65425 68157 68136 58013 60069 38537 71626 63098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38550000 11292 1082 10682 21530 17284 17284 1 9606 Homo sapiens 0.02883055840857196 GTPWEGGLFK Unmodified 1090.5447 0.54474515 2061 H3BQQ9;A8K503;Q7KZS0;B0QYN7;P63279;H3BPC4 UBE2I SUMO-conjugating enzyme UBC9 yes no 0 0 0 3.67 3.09 1 1 1 59.38 59.398 2;3 2.7703E-05 18205 20230619_1880_Aki_TMTPro18x_K_F1 177.36 123.2 214850 200330 221560 204710 217880 254440 259630 244250 262050 183580 179130 155780 185970 154520 282780 192980 173300 165770 198890 183400 224400 207200 227750 253320 259370 248600 263290 188090 188100 159550 194090 161470 279310 192100 166820 157770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 537790000 11293 2061 10683 21531;21532;21533 17285;17286 17285 2 9606 Homo sapiens 0.003094564432331026 GTQAGEIHDLK Unmodified 1167.5884 0.58840088 1790 K7EKH8;B4DG07;A0A8J9C065;X6RM00;G8JLD3;X6RLX0;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;A0A8I5KS52;Q8IUD2-5;A0A8I5QKW1 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes no 0 0 0 4 0 1 38.906 38.948 3 0.013923 9122 20230619_1883_Aki_TMTPro18x_K_F4 65.043 39.657 60453 40278 58410 64623 101800 82740 74339 96730 84270 71592 99436 105660 74209 78157 109400 70641 99812 103040 55819 37097 60154 63480 101350 82640 76909 97098 85833 74698 100310 104750 78297 81083 109890 73054 95614 97516 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42348000 11294 1790 10684 21534 17287 17287 1 9606 Homo sapiens 0.011310211496947886 GTQASHQVLR Unmodified 1095.5785 0.57850489 2953 F2Z2U4;H0Y4W2;Q9Y4A5-2;Q9Y4A5;Q59FH1;A0A994J4K1;A0A2R8YFJ4 TRRAP Transformation/transcription domain-associated protein yes no 0 0 0 8 0 1 26.919 26.952 3 7.1204E-06 4617 20230619_1888_Aki_TMTPro18x_K_F8 157.78 80.931 4049.6 1982 4426.5 5373.4 4957.5 5474.6 4564.2 5799.6 5648.3 4178.9 5269.7 3776.9 4176.3 5081.1 6407.2 2574 4942.2 4141.8 3738 1844.9 4478.5 5141.6 5097.5 5528.2 4662.4 5856.1 5671.2 4301.6 5370.8 3899.7 4411.6 5062.3 6373.3 2728.9 4737.3 3920.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2435200 11295 2953 10685 21535 17288 17288 1 9606 Homo sapiens 0.034538779349986726 GTQCVEQIQELVLR Unmodified 1671.8614 0.86140461 4645 Q9P287-2;B4E318;B4DUS0;Q9P287-4;Q9P287-3;Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes no 0 0 0 6.5 0.5 1 1 60.899 60.942 3 6.1056E-09 18175 20230619_1887_Aki_TMTPro18x_K_F7 132.08 105.96 39021 29611 30018 38761 28951 31614 35294 29695 37942 41682 36570 41737 39620 39310 42811 45509 38966 39449 35996 27192 31278 38283 30346 32472 35289 30827 38482 41487 37771 42261 40526 40921 43281 45294 37323 37531 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89193000 11296 4645 10686 21536;21537 17289;17290 17290 2 9606 Homo sapiens 0.05234836757745143 GTQEVLK Unmodified 773.42832 0.42831841 1188 A0A140VJN3;Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes no 0 0 0 5 0 1 40.251 40.341 2 0.011151 9669 20230619_1885_Aki_TMTPro18x_K_F5 110.12 19.343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11297 1188 10687 21538 17291 17291 1 9606 Homo sapiens 0.032541379433382644 GTQGAEEVLR Unmodified 1058.5356 0.53563702 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1 PLEC Plectin yes no 0 0 0 3 0 1 38.207 38.26 2 0.00032492 8873 20230619_1882_Aki_TMTPro18x_K_F3 131.46 61.402 53244 39673 45738 49393 63133 68210 77786 74365 103530 63094 71856 70700 76137 65027 66609 79118 79692 77414 49148 36416 47393 49339 64634 67676 78292 75223 102600 64682 75384 71287 77149 68001 68690 79150 76106 73554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61547000 11298 3921 10688 21539 17292 17292 1 9606 Homo sapiens 0.008710630869018132 GTQGATAGASSELDASK Unmodified 1549.722 0.72199382 3327 V9HWK0;O76094;O76094-2 HEL103;SRP72 Signal recognition particle subunit SRP72 yes no 0 0 0 3.5 0.5 1 1 41.437 41.489 3 4.7962E-19 10188 20230619_1883_Aki_TMTPro18x_K_F4 190.46 153.45 98137 84606 90711 108880 121810 126690 127750 118150 152730 133560 144210 139440 157040 126050 127540 126850 163340 141830 90718 77643 93353 108150 124200 126570 129170 121720 153800 134390 148860 140810 158450 130570 132160 128320 155780 134630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 349070000 11299 3327 10689 21540;21541 17293 17293 1 9606 Homo sapiens -0.03087829325909297 GTQGVVTNFEIFR Unmodified 1466.7518 0.75177781 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q59FS8 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 1.5 0.5 1 1 59.436 59.436 2 5.0931E-08 18397 20230619_1881_Aki_TMTPro18x_K_F2 147.96 104.93 247670 208820 236240 284470 253170 263090 235220 270940 305310 304730 295160 264340 307020 271190 292180 304610 318150 310860 228970 191760 241420 280690 261170 267850 240530 277100 306810 304960 303630 270520 312350 281310 298870 305910 304100 295210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255630000 11300 487 10690 21542;21543 17294;17295 17295 2 9606 Homo sapiens 0.03707199200721334 GTQLLSSGSDGLVK Unmodified 1360.7198 0.71980898 3820 Q12788;A0JLS5;J3KNP2 TBL3 Transducin beta-like protein 3 yes no 0 0 0 7 0 1 52.851 52.922 3 0.00054068 14902 20230619_1887_Aki_TMTPro18x_K_F7 88.768 82.332 137350 106900 118650 124330 145830 185310 150310 142680 174280 119170 125980 128750 144700 113600 131860 131680 134740 136690 126820 98043 122560 124910 149720 181710 151960 148070 174130 122140 132380 129790 146430 118680 134470 132330 128900 129770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124120000 11301 3820 10691 21544 17296 17296 1 9606 Homo sapiens 0.053877867269420676 GTQPPSIR Unmodified 854.46102 0.46101552 2324 B2RDV7;Q96G46;Q96G46-2 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)];tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes no 0 0 0 7 0 1 33.848 33.93 2 0.010387 6875 20230619_1887_Aki_TMTPro18x_K_F7 98.933 56.537 33152 16177 29533 27762 38920 42794 33684 36086 36227 31729 41598 40520 45642 37269 34210 23982 48648 38686 30550 14938 30430 27265 39553 41956 34360 37195 36965 32580 42584 40605 45906 37875 35718 25179 46338 36625 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16365000 11302 2324 10692 21545 17297 17297 1 9606 Homo sapiens 0.027963450661900424 GTQRPVFLK Unmodified 1044.608 0.60801411 3435 Q59EZ3;P11717;A0A7I2V381 IGF2R Cation-independent mannose-6-phosphate receptor yes no 0 0 1 5 0 1 42.292 42.374 3 0.064239 10519 20230619_1885_Aki_TMTPro18x_K_F5 53.517 29.561 129110 103000 124820 158600 169730 176910 151750 134020 168490 145550 145240 132440 141810 116310 129900 133800 136600 131200 119330 94740 128020 155670 172200 176490 154500 140280 169780 146180 149870 134510 144250 121470 132690 134040 130600 124660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140160000 11303 3435 10693 21546 17298 17298 1 9606 Homo sapiens 0.08749441951113113 GTQTYSVLEGDPSENYSK Unmodified 1973.8854 0.88543034 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 4 0.816 1 1 1 51.758 51.814 3 9.9043E-14 14542 20230619_1885_Aki_TMTPro18x_K_F5 152.71 141.89 62132 45077 55361 58791 50466 55307 56886 50300 56998 65599 66867 68172 66827 55830 58172 69438 70328 73913 57360 41401 56742 58194 52983 56082 57005 52183 58496 65538 68145 68659 67793 58730 60040 69775 67196 70142 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 284910000 11304 1853 10694 21547;21548;21549 17299;17300 17300 2 9606 Homo sapiens -0.0625569606550016 GTQVYSPEK Unmodified 1007.4924 0.49237523 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 5.5 0.5 1 1 40.491 40.583 2 0.00014528 9761 20230619_1885_Aki_TMTPro18x_K_F5 136.57 93.746 26084 17549 34975 39642 51793 63339 42942 54691 57269 14863 25131 15969 15469 13017 28480 9955.4 23546 13841 24160 16248 35081 38470 52278 61971 44252 55355 56093 17264 26832 16122 16724 13369 28352 10334 22509 13141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15894000 11305 3312 10695 21550;21551 17301;17302 17301 2 9606 Homo sapiens -0.011071266903741162 GTRPFVISR Unmodified 1031.5876 0.58761301 532 A0A024R8Q1;P10253;I3L2V9 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase yes no 0 0 1 6 0 1 36.984 37.052 3 0.0011739 8350 20230619_1886_Aki_TMTPro18x_K_F6 100.58 45.017 97760 95418 103900 116640 126180 134750 135880 149510 154020 100580 120170 114280 118470 92428 118060 116130 135880 116210 90552 87482 105460 116310 129510 135210 136990 150360 154330 104740 124790 114750 120930 97344 121020 116330 129700 110450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89653000 11306 532 10697 21552 17303 17303 1 9606 Homo sapiens 0.07308271291321944 GTSFDAAATSGGSASSEK Unmodified 1629.7118 0.71182307 1075 P13804;A0A0S2Z3L0;A0A0S2Z3M4;P13804-2;H0YLU7;A0A8I5KVL5;A0A8I5KYH4;A0A8I5KYP7;A0A8I5KUF3;H3BV91;H0YKF0;A0A8I5KT03;A0A8I5KUR2;A0A8I5KVC9;H0YK49 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes no 0 0 0 3.5 0.5 1 1 42.398 42.452 3 6.080599999999999E-19 10573 20230619_1883_Aki_TMTPro18x_K_F4 185.02 175.97 80370 64773 83732 89816 112100 105010 113080 108530 135940 97560 116220 114120 116860 98336 105590 104910 120940 108020 74335 59505 85235 88831 114080 105140 114610 110340 136270 99757 120180 114590 118730 102300 108400 105520 115480 102620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 513160000 11307 1075 10698 21553;21554 17304 17304 1 9606 Homo sapiens -0.0778443705112295 GTSISTKPPLTK Unmodified 1228.7027 0.70270235 3545 P35249;C9JZI1;P35249-2;C9J8M3;C9JXZ7;C9JW34;C9JGY5;F8WE44 RFC4 Replication factor C subunit 4 yes no 0 0 1 4 0 1 44.21 44.254 3 0.00059433 11384 20230619_1883_Aki_TMTPro18x_K_F4 94.507 75.911 241160 184620 200950 228640 231510 251900 236510 232790 284590 300100 307010 277480 324950 266670 262970 346050 313690 273190 222600 169430 208090 227560 238320 252560 239680 240930 288240 299030 314450 282540 328090 279580 271750 342180 299370 260400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216720000 11308 3545 10699 21555 17305 17305 1 9606 Homo sapiens 0.0974991091177344 GTSQYYPSYSGSSR Unmodified 1538.6638 0.66375066 3458 Q6PJU3;P15923;U5LXR9;X6REB3;P15923-2;P15923-3 TCF3 Transcription factor E2-alpha yes no 0 0 0 8 0 1 40.53 40.523 2 1.505E-06 9683 20230619_1888_Aki_TMTPro18x_K_F8 137.16 112.87 10478 8356 9116.8 10650 8413.7 8939.2 10229 11578 11732 15027 17217 14244 15622 14205 10069 15751 14962 11288 9677 7669.7 9372.6 10546 8845.5 9231.3 10264 11734 12092 14970 17306 14505 15737 14725 10637 15541 14243 10782 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12486000 11309 3458 10700 21556 17306 17306 1 9606 Homo sapiens -0.08403466180516261 GTSSFGK Unmodified 682.3286 0.32860436 85 D6R9X9;D6RG19;A0A024R0A2;P61927 RPL37 Ribosomal protein L37;60S ribosomal protein L37 yes no 0 0 0 8 0 1 39.049 39.036 2 0.013637 9093 20230619_1888_Aki_TMTPro18x_K_F8 113.7 8.3053 65471 26984 131490 131030 198440 185010 136510 228790 82521 40336 107080 133140 77488 98529 101190 31240 163990 126430 60856 25578 129030 124320 198570 183750 139890 225370 87936 53529 107680 129760 81439 99139 105520 38047 156040 119210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42452000 11310 85 10701 21557 17307 17307 1 9606 Homo sapiens -0.025266796706091554 GTSVVLICPQDGMEAIPNPFIQQQDA Unmodified 2827.3521 0.35206528 4674 Q9UK45;A0A087X2I5;O75243 LSM7 U6 snRNA-associated Sm-like protein LSm7 yes no 0 0 0 6 0.816 1 1 1 66.274 66.311 3 1.8219E-05 20859 20230619_1886_Aki_TMTPro18x_K_F6 83.362 70.808 36440 27439 31182 30220 23525 27573 30579 32273 31427 38413 34288 32173 39203 37070 35331 45708 41723 43743 33638 25156 31991 30281 25254 28199 30473 32803 32124 38291 35250 33135 39703 38524 36406 45652 39872 41561 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 169450000 11311 4674 10702 21558;21559;21560 17308;17309 17308 2 9606 Homo sapiens 0.011483329872135073 GTSYQSPHGIPIDLLDR Unmodified 1867.9428 0.94282606 4699 Q9Y230;B3KNL2;Q9Y230-2;M0R0Y3 RUVBL2 RuvB-like 2 yes no 0 0 0 6.5 0.5 1 1 53.859 53.931 3 0.0043853 15240 20230619_1887_Aki_TMTPro18x_K_F7 68.41 56.352 49872 39098 51281 53952 54841 55898 56378 53624 58424 59496 55853 58176 61315 56878 52831 69461 69670 74774 46114 35920 52040 53280 56674 56329 56825 55110 59340 59779 57682 59085 62057 59373 54894 69843 66533 70946 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80895000 11312 4699 10703 21561;21562 17310 17310 1 9606 Homo sapiens 0.043572357213861324 GTTATSAQANSTPTSVASVVTSAESPASR Unmodified 2735.321 0.32095939 459 A0A024R7K7;A0A024R7M6;Q86YP4-2;Q86YP4;Q86YP4-3;B4DKZ7 GATAD2A Transcriptional repressor p66-alpha yes no 0 0 0 7 0 1 50.677 50.758 3 0.0032279 13989 20230619_1887_Aki_TMTPro18x_K_F7 62.052 53.661 4924 5294.4 6095.2 6702.9 13004 15074 10169 8986.9 14108 7448.3 8073.9 13512 8611.7 8047.5 8832.9 9997.3 8690.1 12993 4571 4854.4 6205.1 6754.7 12894 14463 10524 9560.4 13893 7810.6 8629.6 13239 8790.8 8579.9 8978.4 10178 8345.8 12293 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30805000 11313 459 10704 21563 17311 17311 1 9606 Homo sapiens 0.02271174478210014 GTTAVLTEK Unmodified 918.50221 0.50221163 2906 Q86U62;Q6IBT1;E9KL30;Q99436;B2RAQ9 PSMB7 Proteasome subunit beta type;Proteasome subunit beta type-7 yes no 0 0 0 5.8 0.748 2 2 1 43.784 43.869 2;3 0.00014822 11150 20230619_1885_Aki_TMTPro18x_K_F5 170.95 73.312 231940 154500 258390 280800 309870 352010 278900 300870 504670 281930 371140 381760 426760 319000 302960 272680 429480 397550 214430 142540 261190 273860 317440 349120 289890 310380 495220 289530 389310 380770 427750 329020 317010 281890 409480 376390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 518410000 11314 2906 10705 21564;21565;21566;21567;21568 17312;17313 17312 2 9606 Homo sapiens 0.03970061314987561 GTTEEVCR Unmodified 950.41274 0.4127447 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 1 0 1 29.165 29.165 2 0.0013285 5681 20230619_1880_Aki_TMTPro18x_K_F1 144.38 95.017 13089 6406.6 21685 17544 22714 26260 18777 27027 19813 14032 23848 29506 17828 21796 18915 8178.1 29663 25716 12138 5964.7 21303 16906 23392 25876 19231 27184 20253 15342 24055 28953 18492 22001 19743 9459.2 28250 24254 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13751000 11315 12 10706 21569 17314 17314 1 9606 Homo sapiens -0.06444516636008757 GTVDCVQAR Unmodified 1004.4709 0.47092828 2235 B4DKX4;B2R6E2;Q53EL6-2;Q53EL6 PDCD4 Programmed cell death protein 4 yes no 0 0 0 3 0 1 32.284 32.362 2 0.00012058 6493 20230619_1882_Aki_TMTPro18x_K_F3 167.33 131.45 21298 12985 31355 26084 56868 67467 43034 52821 45896 16566 36583 42884 31333 37938 40931 13461 48159 44449 19739 12004 31379 25779 56687 64681 44288 53943 46108 19540 37811 42153 32690 37980 41692 15751 45983 41903 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47544000 11316 2235 10707 21570 17315 17315 1 9606 Homo sapiens -0.031128349907362463 GTVEEEIIER Unmodified 1173.5877 0.58773217 709 A0A024RC75;O14647-2;O14647;A0A1B0GTU9;A8K9Y5;A0A0D9SEU0;A0A0D9SF92 CHD2 Chromodomain-helicase-DNA-binding protein 2 yes no 0 0 0 1 0 1 46.587 46.587 2 0.0072212 12954 20230619_1880_Aki_TMTPro18x_K_F1 85.154 57.058 56492 43353 48602 54025 44770 47805 49650 53569 56680 65906 71634 69118 76544 65461 62790 78250 79688 81745 52156 39789 49995 53609 46952 48956 50035 54659 57979 66022 72976 69926 77322 68328 65109 78578 76095 77598 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49799000 11317 709 10708 21571 17316 17316 1 9606 Homo sapiens 0.007881817100042099 GTVEGFEPADNK Unmodified 1262.5779 0.57789577 3560 P37108;H0YLA2 SRP14 Signal recognition particle 14 kDa protein yes no 0 0 0 3 0 1 46.443 46.522 2 0.01434 12546 20230619_1882_Aki_TMTPro18x_K_F3 86.624 60.026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11318 3560 10709 21572 17317 17317 1 9606 Homo sapiens -0.04289006295402942 GTVEPQLEAR Unmodified 1098.5669 0.56693715 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98;A0A669KBC6 FLNA Filamin-A yes no 0 0 0 2.5 0.5 1 1 39.132 39.192 2 1.865E-05 9263 20230619_1882_Aki_TMTPro18x_K_F3 161.17 129.24 279860 228310 260980 290160 549390 562230 383710 395640 704450 354190 508530 545400 412380 397290 457530 399260 467640 512000 258630 209530 271160 291280 543760 544070 405970 414400 690370 366880 526930 539870 426480 414580 464710 407730 447640 484950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 413250000 11319 3484 10710 21573;21574 17318;17319 17319 2 9606 Homo sapiens 0.02159636120995856 GTVGEPTYDAEFQHFLR Unmodified 1965.9221 0.92209062 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5.5 0.5 1 1 55.577 55.647 3 2.2924000000000002E-71 16106 20230619_1885_Aki_TMTPro18x_K_F5 319.74 275.17 137810 122670 150230 151680 118370 149140 143430 142790 149770 187270 170300 192070 186210 162170 182780 207590 188140 218940 127590 112520 151120 150780 126240 150830 143460 147530 153250 186940 174650 193670 189400 170680 186370 208430 180170 207720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 361340000 11320 3881 10711 21575;21576 17320 17320 1 9606 Homo sapiens -0.02223354658349308 GTVGSILDR Unmodified 916.49779 0.49779495 3692 P61221;D6R9I9;D6RGF4;H0Y990 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 0 0 6.5 0.5 1 1 45.459 45.545 2 5.0444E-05 11879 20230619_1886_Aki_TMTPro18x_K_F6 163.69 90.022 346860 307040 291170 321920 317780 388920 347020 337590 415370 407150 406800 400000 424440 352370 390210 443540 458840 400900 320470 281200 301050 324840 329300 387060 350280 350270 419020 407620 418500 404840 431010 369860 401450 441740 437950 381440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 785900000 11321 3692 10712 21577;21578 17321;17322 17321 2 9606 Homo sapiens 0.03620596892085359 GTVIIIANHGDR Unmodified 1264.6888 0.68878362 1248 Q16851-2;A0A140VKE1;A0A7I2YQ74;Q16851;E7EUC7;B4DUP2;B2RAN1;D6W5E6 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes no 0 0 0 7.5 0.5 1 1 39.975 40.003 3 4.8607E-08 9238 20230619_1887_Aki_TMTPro18x_K_F7 141.37 108.96 122380 85712 126160 143760 147530 162570 147440 141840 172230 123590 136000 148260 152110 122860 140790 135850 161120 146520 113090 78972 128280 140540 151560 162400 149400 145900 172480 126730 142050 148510 154190 128290 144450 136940 153860 139110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220390000 11322 1248 10713 21579;21580 17323;17324 17323 2 9606 Homo sapiens 0.0670267820337358 GTVLDQVPVNPSLYLIK Unmodified 1855.0455 0.045500215 192 A0A024R297;Q9Y657;Q5JUX0 SPIN;SPIN1;SPIN3 Spindlin-1;Spindlin-3 yes no 0 0 0 3 0 1 63.832 63.863 3 0.00028521 20089 20230619_1882_Aki_TMTPro18x_K_F3 61.815 14.734 47957 38423 40695 50951 42035 52492 51802 50360 57482 56915 60511 65106 60958 48049 56688 70450 61681 65048 44283 35282 42038 50424 43885 52893 51835 51786 58356 57408 61994 65151 61975 51311 58074 70089 58991 61827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55616000 11323 192 10714 21581 17325 17325 1 9606 Homo sapiens 0.15217928460151597 GTVRPANDFNPDADAK Unmodified 1686.7962 0.79616182 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 1 4 0.816 2 2 2 41.066 41.129 3;4 2.8688E-08 10068 20230619_1882_Aki_TMTPro18x_K_F3 139.88 115.33 487600 381670 459640 484840 561700 570580 529860 507330 567190 609900 695940 656840 679120 596470 622610 729680 705340 683460 450540 350340 470860 482230 574170 569160 537360 525460 581050 612310 706970 662980 691080 624110 639270 728270 673910 649720 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3255999999.9999995 11324 1062;1064 10715 21582;21583;21584;21585;21586;21587 17326;17327;17328 17326 3 9606 Homo sapiens -0.019764414437304367 GTVTDFPGFDER Unmodified 1339.6044 0.60444487 3416 V9HWE0;P08758;D6RBE9;E9PHT9;B4DNG6;D6RCN3 HEL-S-7;ANXA5 Annexin;Annexin A5 yes no 0 0 0 3 0.816 1 1 1 53.697 53.73 2 2.6432E-13 15697 20230619_1883_Aki_TMTPro18x_K_F4 214.82 187.2 493630 429420 479640 577900 887350 1027300 795780 779760 872030 875820 895690 887450 1049000 842130 919210 1044200 929410 1065300 456520 394260 495360 576770 887360 998690 809580 815780 885610 880650 924550 899220 1059200 881190 938300 1046900 890090 1011100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 763730000 11325 3416 10716 21588;21589;21590 17329;17330;17331;17332 17332 4 9606 Homo sapiens -0.0517731740403633 GTVVTGTLER Unmodified 1031.5611 0.56112349 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 5.5 1.12 1 1 1 1 40.571 40.645 2 5.6476E-12 9786 20230619_1886_Aki_TMTPro18x_K_F6 218.58 184.57 811540 600990 694300 775720 950740 945920 922360 956430 1083400 975490 1044200 1052500 1122200 916140 934470 1098300 1229200 1054300 749060 551870 719320 771200 966130 944000 936480 976580 1093000 987310 1076500 1060500 1134000 959210 970610 1097900 1172000 1002500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2430600000 11326 1417 10717 21591;21592;21593;21594 17333;17334;17335 17334 3 9606 Homo sapiens 0.046605376093339146 GTVVYGEPITASLGTDGSHYWSK Unmodified 2424.1598 0.1597547 1284;4185 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q86U75 DPYSL2 Dihydropyrimidinase-related protein 2 no no 0 0 0 7.5 0.5 1 1 58.731 58.776 3 3.4742E-26 17268 20230619_1888_Aki_TMTPro18x_K_F8 181.61 165.71 203210 177620 206850 209610 152990 181650 201650 198650 168730 258260 225420 266980 257980 218720 207350 247590 262070 322850 188010 162850 209030 208780 164450 186230 199650 203420 176460 257830 230310 268730 259870 228880 215000 252410 250640 305620 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1985799999.9999998 11327 1284;4185 10718 21595;21596 17336;17337;17338 17337 3 9606 Homo sapiens 0.004641216936306591 GTWERPGGAAPLGYDFWYQPR Unmodified 2423.1447 0.14471376 3841 V9HWG1;Q13228-3;Q13228;Q13228-4;B4DPI7;Q13228-2;H0Y532;Q9H8A8;A6PVX1 HEL-S-134P;SELENBP1 Selenium-binding protein 1 yes no 0 0 1 3 0 1 61.072 61.101 3 7.1238999999999996E-37 18858 20230619_1882_Aki_TMTPro18x_K_F3 228.57 212.68 41683 31196 36564 48043 42351 53320 60058 52975 75679 53837 50637 57465 59606 58448 69322 65474 63451 68507 38484 28703 37752 47165 44087 53466 59941 54187 75148 54535 53607 58203 61075 60599 69976 65870 60801 65017 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73638000 11328 3841 10719 21597 17339 17339 1 9606 Homo sapiens -0.009932805930475297 GTWVQLK Unmodified 830.46504 0.46503826 3593 Q6IAX2;P46778 RPL21 60S ribosomal protein L21 yes no 0 0 0 2.5 0.5 1 1 52.389 52.438 2 0.0069009 15204 20230619_1882_Aki_TMTPro18x_K_F3 129.4 68.609 1165800 1105700 1079100 889130 1415500 2711900 537100 1034700 888550 264640 261530 226200 252410 202110 606910 287210 296800 249510 1078400 1010400 1107900 939240 1430800 2562900 605390 1149800 859620 310160 297850 231490 274720 213820 592000 286170 286650 237560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 892290000 11329 3593 10720 21598;21599 17340;17341 17341 2 9606 Homo sapiens 0.043024345598951186 GTYFTHEAK Unmodified 1052.4927 0.49270958 891 Q9BY67-3;Q9BY67-4;X5D7A8;Q9BY67;Q9BY67-5;X5DNF2;X5DQR8;X5DQS5;X5D8W0;A0A087X1W8;A0A0A0MTJ8;Q6MZK6 CADM1;DKFZp686F1789 Cell adhesion molecule 1 yes no 0 0 0 6.5 0.5 1 1 38.477 38.55 3 1.1729E-08 8658 20230619_1887_Aki_TMTPro18x_K_F7 182.65 122.21 476760 354120 434990 508630 536310 477460 522040 523330 601920 486180 412280 383150 557130 362480 284700 648980 556000 408830 440270 325560 447170 500400 547930 486390 529520 530510 601250 490380 437710 393590 550720 389960 311230 632980 528340 391400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 476060000 11330 891 10721 21600;21601 17342;17343 17343 2 9606 Homo sapiens -0.03143706970558924 GTYLATFHQR Unmodified 1192.5989 0.59890598 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q86UM1;C9JQN7 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 3 0.816 1 1 1 40.083 40.139 3 1.3522E-19 9644 20230619_1882_Aki_TMTPro18x_K_F3 206.73 179.25 267520 202150 223080 255750 325190 377110 294480 308810 385150 180140 189270 204330 198630 169280 218480 157500 243240 231990 246910 185570 232070 255350 329290 370420 301300 316660 378840 190120 203990 205110 203500 175270 222820 162830 232410 219600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 429140000 11331 487 10722 21602;21603;21604 17344;17345 17345 2 9606 Homo sapiens 0.010310485947684356 GTYLGLANHGQTR Unmodified 1386.7004 0.70041094 4026 Q59FW1;Q9BRL8 yes no 0 0 0 2 0 1 37.847 37.91 3 8.9575E-08 8851 20230619_1881_Aki_TMTPro18x_K_F2 143.21 120.19 41884 40595 46480 53192 40135 47152 48541 43540 59053 49812 62276 53468 53900 45676 50450 49061 63271 59246 38808 37246 46783 52589 42438 48050 48785 44941 59629 50142 63309 53874 55120 47570 52059 49824 60386 56179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77510000 11332 4026 10723 21605 17346 17346 1 9606 Homo sapiens 0.02252875226690776 GTYLTHEAK Unmodified 1018.5084 0.50835964 4221 Q8N126-3;Q8N126;Q8N126-2 CADM3 Cell adhesion molecule 3 yes no 0 0 0 5.25 1.98 1 1 2 2 1 1 35.426 35.475 2;3 0.0022332 7716 20230619_1883_Aki_TMTPro18x_K_F4 88.948 37.094 473240 213710 668390 582730 596640 733400 642160 744810 175450 433590 774270 1005500 816670 767810 836800 297710 1108400 917790 437860 199050 661240 559670 625470 729330 631780 751740 229540 471090 770170 985360 833520 775170 862310 343350 1056600 865850 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 10113000000 11333 4221 10724 21606;21607;21608;21609;21610;21611;21612;21613 17347;17348;17349;17350;17351;17352 17348 6 9606 Homo sapiens -0.00015420453473780071 GTYQPLSTR Unmodified 1021.5193 0.51925868 2133 B0UZZ8;A8K9A1;O15213;B4DP15;A0A1U9X8W1;A0A1U9X8U7;A0A1U9X8U3;B4DNI0;A8K806 C6orf11;WDR46 WD repeat-containing protein 46 yes no 0 0 0 8 0 1 37.99 37.976 2 0.00012159 8664 20230619_1888_Aki_TMTPro18x_K_F8 152.11 105.03 59405 45198 49197 57459 62972 63795 63395 57196 79546 53900 54034 47744 49270 44703 54996 59970 69380 44909 54828 41492 51077 57087 64335 63891 64348 58821 79032 54528 56403 48692 50765 46988 56635 59169 66074 42904 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30546000 11334 2133 10725 21614 17353 17353 1 9606 Homo sapiens 0.009359819207929831 GVAALTSDPAVQAIVLDTASDVLDK Unmodified 2468.301 0.30099921 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 7 0 1 66.783 66.806 4 2.8295E-63 20814 20230619_1887_Aki_TMTPro18x_K_F7 209.71 191.42 25221 20558 20828 23789 21087 26268 24616 22939 28389 24672 25691 31172 30809 25550 32104 30067 28772 31491 23287 18850 21549 23791 22016 26295 24727 23723 28595 25049 26758 31145 31336 26779 32427 30231 27579 29885 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27248000 11335 1292 10726 21615 17354 17354 1 9606 Homo sapiens 0.12558075276274394 GVAGAHGLLCLLSDHVDK Unmodified 1860.9516 0.9516166 1451 A0A384N605;U3KQ56;Q9UBQ7;Q5M7Z5 GRHPR Glyoxylate reductase/hydroxypyruvate reductase yes no 0 0 0 1 0 1 57.391 57.391 4 5.0117000000000006E-30 17394 20230619_1880_Aki_TMTPro18x_K_F1 220.61 207.49 35722 28799 38110 41569 31452 42994 40057 43074 33569 40192 46134 50163 38485 39828 33778 44405 48043 62609 33046 26468 38447 40937 33461 43332 39726 43925 35074 41045 46433 50112 39354 41659 35283 45528 45931 59220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37668000 11336 1451 10727 21616 17355 17355 1 9606 Homo sapiens 0.05557886086171493 GVAGNPMVK Oxidation (M) 887.45349 0.4534873 4380 Q96M27-5;Q96M27;Q96M27-3;Q96M27-2;Q96M27-4 PRRC1 Protein PRRC1 yes no 0 1 0 8 0 1 38.206 38.191 3 0.033642 8760 20230619_1888_Aki_TMTPro18x_K_F8 49.96 22.339 70855 42865 63828 68710 94635 92404 87756 83197 113150 64443 76296 77480 69919 61673 79793 64464 86281 71687 65357 39498 65910 67531 95635 91414 89597 85132 112200 66630 79766 77531 72074 64276 81230 65200 82389 68066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37215000 11337 4380 10728 21617 17356 17356 2753 1 9606 Homo sapiens 0.0052586947426789266 GVAINFVK Unmodified 846.49634 0.49633839 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 0 2.5 0.5 1 1 54.026 54.066 2 0.00082715 15942 20230619_1882_Aki_TMTPro18x_K_F3 155.19 109.88 351370 243870 277760 361050 315230 385780 319820 367640 418510 386910 431440 446270 439610 386210 335620 501200 495200 500680 324030 224340 289360 355050 325260 387570 325380 377280 421190 391850 442330 448500 443720 406350 352840 501260 472300 475540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 770260000 11338 543 10729 21618;21619 17357 17357 1 9606 Homo sapiens 0.06695007593987157 GVAINFVTEEDKR Unmodified 1476.7573 0.75725712 3883 Q14240;Q14240-2;Q9NZE6;Q96B07 EIF4A2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 0 1 5.5 0.5 1 1 50.177 50.253 3 0.00011109 13886 20230619_1885_Aki_TMTPro18x_K_F5 102.26 70.394 110100 148190 147330 123720 127130 112430 154090 136070 119680 144900 152370 112790 148070 95819 206310 122850 110980 108180 102500 135320 146100 127060 133920 115330 152800 137650 125270 144880 154510 115500 153680 100980 203040 122480 107090 102910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129420000 11339 3883 10730 21620;21621 17358 17358 1 9606 Homo sapiens 0.0379487799252729 GVAINMVTEEDK Oxidation (M) 1320.6231 0.6231314 2105 P60842;A8K7F6;A8K088;B4DNH2 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 1 0 3 0 1 46.464 46.542 3 0.00011135 12556 20230619_1882_Aki_TMTPro18x_K_F3 105.2 85.88 180040 110160 131430 189080 160800 209330 161890 171500 244440 209030 257450 273210 272180 230180 140460 348230 301240 299670 165840 101590 138370 184470 165280 209070 165710 178870 244710 211320 264020 273230 271230 244960 155180 344650 286660 285150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194960000 11340 2105 10731 21622 17359 17359 1325 1 9606 Homo sapiens -0.024355238245334476 GVAINMVTEEDK Unmodified 1304.6282 0.62821678 2105 P60842;A8K7F6;A8K088;B4DNH2 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 0 0 3.67 0.471 1 2 52.345 52.383 2;3 3.2051E-18 15090 20230619_1883_Aki_TMTPro18x_K_F4 240.37 183.8 266170 156010 190340 250170 169670 266200 201880 235520 342560 358280 319960 404940 475240 405930 212340 635060 489700 511790 245110 143780 199780 244880 179860 266940 206100 245950 340450 357060 336290 409250 467970 430560 238210 626230 466010 487320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1027199999.9999999 11341 2105 10731 21623;21624;21625 17360;17361 17361 2 9606 Homo sapiens -0.011912199619018793 GVAINMVTEEDKR Unmodified 1460.7293 0.72932781 2105 P60842;A8K7F6;A8K088;B4DNH2 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 0 1 4.5 1.12 1 1 1 1 46.646 46.716 3 1.4067E-15 12466 20230619_1883_Aki_TMTPro18x_K_F4 202.92 174.86 378990 323910 415450 372500 461200 470200 511390 461310 390300 465840 420660 243850 383660 289930 416620 301970 272730 221510 350820 296930 419450 373700 475940 468000 508970 471880 406150 463640 427580 259570 393790 298480 414480 299230 261980 211430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 986380000 11342 2105 10732 21626;21627;21628;21629 17362;17363 17362 2 9606 Homo sapiens 0.017392317407939117 GVAINMVTEEDKR Oxidation (M) 1476.7242 0.72424243 2105 P60842;A8K7F6;A8K088;B4DNH2 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 1 1 5 0 1 41.449 41.534 3 0.043703 10184 20230619_1885_Aki_TMTPro18x_K_F5 48.659 35.523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11343 2105 10732 21630 17364 17364 1325 1 9606 Homo sapiens 0.004949278781850808 GVAVLCTE Unmodified 847.41095 0.41095378 3881 Q14204;A0A2R8Y706 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2.5 0.5 1 1 51.572 51.627 2 0.0088669 14866 20230619_1882_Aki_TMTPro18x_K_F3 103.41 91.504 140150 95945 112750 134150 128800 152810 125030 143550 167920 146540 149660 184770 175820 166100 132650 238700 211730 203900 129250 88210 117180 132520 132650 152830 127650 147340 167910 149150 155740 185280 176800 175620 140600 236420 201760 194060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188480000 11344 3881 10733 21631;21632 17365 17365 1 9606 Homo sapiens -0.018855256539723086 GVAYTLLTPK Unmodified 1061.6121 0.61209643 4199 Q86XP3;Q86XP3-2;B3KX23;T2DQ69;B3KV84;B3KMI4 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 0 0 3.33 0.471 2 1 56.607 56.643 2;3 9.0498E-05 16931 20230619_1883_Aki_TMTPro18x_K_F4 149.82 120.24 113470 86173 98207 105140 96931 116640 114270 108110 126440 127450 119150 130680 139730 118600 134470 144030 138390 149050 104760 79076 101070 104780 101370 116870 114580 111570 127900 127880 123600 132080 141710 124100 137100 144580 132440 141480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113220000 11345 4199 10734 21633;21634;21635 17366;17367;17368 17368 3 9606 Homo sapiens 0.08375486654153974 GVCHIPMAEPFCPK Oxidation (M) 1657.7415 0.74148917 1161;3805 Q13126-2;Q13126-3;B4DUC8;A0A384ME80;Q13126;Q13126-4;A0A140CZL4;J3QSB7;Q6FHT1;Q6FHP1;A0A140CZL5;Q13126-7;Q13126-6;Q13126-5;Q05DJ2 MTAP S-methyl-5'-thioadenosine phosphorylase;Purine nucleoside phosphorylase no no 0 1 0 8 0 1 47.026 47.074 3 5.5812E-05 12228 20230619_1888_Aki_TMTPro18x_K_F8 96.745 86.957 28200 26077 24163 23973 29433 26166 28449 27743 33781 27781 31606 30886 32478 22411 25809 29459 28705 32711 26067 23854 24951 24440 30095 26366 28903 28235 34009 28172 32555 30932 32767 23798 26543 29660 27464 31020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98394000 11346 1161;3805 10735 21636 17369 17369 713 1 9606 Homo sapiens -0.06107191112005239 GVCLIDEFDK Unmodified 1194.5591 0.55907458 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5;Q9BWF4 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 4 0.816 2 2 2 60.454 60.482 2;3 0.00010064 18484 20230619_1883_Aki_TMTPro18x_K_F4 129.85 95.891 293150 241090 277670 274080 209300 252260 269530 254610 280170 346130 305450 291510 345150 269380 288420 370210 301550 291430 270960 221010 282310 273930 224600 256850 268740 262470 286220 343130 313830 297720 348120 283980 295460 365780 288320 277680 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 674910000 11347 2702 10736 21637;21638;21639;21640;21641;21642 17370;17371;17372;17373 17371 4 9606 Homo sapiens -0.03042259190783625 GVCSCVEAGK Unmodified 1065.4583 0.45831468 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;P26358-3;B3KVA0;K7ENW7 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 5 0 1 40.043 40.133 2 2.686E-05 9603 20230619_1885_Aki_TMTPro18x_K_F5 156.92 114.81 37963 24468 41519 44184 36433 45106 42009 42155 48156 43529 54896 57090 63130 48821 38037 35304 63938 56385 35084 22576 41825 42979 38429 45430 42246 43324 48955 44340 56344 57018 62957 49967 40524 36893 60872 53359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38265000 11348 442 10737 21643 17374 17374 1 9606 Homo sapiens -0.07179614445294646 GVCTEAGMYALR Oxidation (M) 1342.601 0.60095617 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8 PSMC5 26S protease regulatory subunit 8 yes no 0 1 0 6 0 1 44.352 44.444 2 0.00051705 11429 20230619_1886_Aki_TMTPro18x_K_F6 99.013 79.651 71704 62338 60300 74564 78091 77402 82138 77475 82332 81991 89061 71559 88658 68772 69051 96352 90267 81857 66241 57164 62554 74327 79753 78089 82571 79277 84142 82304 90903 73135 89536 72512 71882 95487 86103 77933 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66322000 11349 1202 10738 21644 17375 17375 737 1 9606 Homo sapiens -0.056640267739339833 GVCTEAGMYALR Unmodified 1326.606 0.60604155 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 6.5 0.5 1 1 48.376 48.458 2 8.1703E-07 12884 20230619_1887_Aki_TMTPro18x_K_F7 161.44 134.44 237230 190040 218890 228110 237700 279030 313920 305320 361500 356350 297960 300850 400470 282760 304210 449680 347080 325160 219190 174320 224320 227980 247640 278840 313410 311320 363270 355720 313150 307540 400570 301220 314200 441790 331510 310240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141770000 11350 1202 10738 21645;21646 17376 17376 1 9606 Homo sapiens -0.04419722911302415 GVDEVTIVNILTNR Unmodified 1541.8413 0.8413211 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;H0YMU9;B4DNH8;H0YNB8;H0YKS4;A0A7I2V4P4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YMD9 ANXA2;HEL-S-270 Annexin A2;Annexin yes no 0 0 0 7.67 0.471 1 2 63.616 63.642 2;3 3.1255E-22 19336 20230619_1888_Aki_TMTPro18x_K_F8 228.02 203.73 185010 138200 259750 240080 217830 310400 172490 240260 247150 276290 291070 270550 292030 285500 340160 294280 427440 439390 171550 127360 256900 234840 228900 306580 179310 251040 249520 277180 296580 275510 300670 294610 349590 303800 408210 415750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 9552000000 11351 368 10739 21647;21648;21649 17377;17378;17379 17378 3 9606 Homo sapiens 0.09207409089481189 GVDGSFLAR Unmodified 920.47158 0.4715802 1318 Q06124-1;Q06124;A0A8I5KW48;A0A3G1LBG2;A0A1W2PPU4;A0A8I5QJ58;Q06124-3;A0A8I5KRZ3;A0A8I5QL30;A0A8I5KVS6;B3GUD5;B3GUD4;A0A6C0W5X7 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 0 0 0 7 0 1 46.297 46.384 2 0.00087573 11908 20230619_1887_Aki_TMTPro18x_K_F7 124.08 106.04 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11352 1318 10740 21650 17380 17380 1 9606 Homo sapiens 0.00816327720622212 GVDIVMDPLGGSDTAK Unmodified 1573.7658 0.76577289 178 A0A024R1Z6;Q99536;Q99536-3;B3KUF8;Q99536-2;K7ESA3;K7ENX2;K7EM19 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes no 0 0 0 5 0 1 61 61.05 3 0.0030234 18380 20230619_1885_Aki_TMTPro18x_K_F5 70.41 57.619 122200 109250 111180 122870 117470 145540 141560 125020 183050 110440 106100 110930 115280 102770 119370 127950 122400 131470 112970 100120 114060 123270 122380 144960 142500 128810 180840 112600 112940 112350 117640 107600 121530 128340 117140 124800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163090000 11353 178 10741 21651 17381 17381 1 9606 Homo sapiens 0.0018406384688205435 GVDLFESFFPYQVTER Unmodified 1932.9258 0.92577901 4535 Q9H974-2;Q9H974-3;Q9H974;Q9H974-4 QTRTD1 Queuine tRNA-ribosyltransferase subunit QTRTD1 yes no 0 0 0 7.5 0.5 1 1 65.622 65.644 3 2.304E-06 20219 20230619_1888_Aki_TMTPro18x_K_F8 90.561 69.328 10041 8782.2 9637.1 9854.3 7233.7 12175 9408.1 9405.5 12679 9091 8917.1 13265 12783 11034 11349 14500 10175 13563 9285.2 8048.1 9793.1 9894.8 7802.4 12063 9461.9 9795.3 12573 9341.4 9525.9 13196 12857 11632 11519 14454 9770.6 12880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93124000 11354 4535 10742 21652;21653 17382 17382 1 9606 Homo sapiens -0.003366848844279957 GVDLQENNPASR Unmodified 1298.6215 0.62149192 164 A0A024R1U4;P51148;P51148-2;K7EIP6 RAB5C Ras-related protein Rab-5C yes no 0 0 0 2.5 0.5 1 1 38.987 39.048 2 7.8986E-13 9166 20230619_1882_Aki_TMTPro18x_K_F3 233.02 202.77 101690 72189 83444 103260 120070 111500 128930 111510 147010 127690 140320 146350 142240 113510 110130 161220 154800 127020 93811 66376 86951 101790 121940 112150 129940 114400 148420 128780 144370 146650 143590 120650 115290 159190 147490 121110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 322780000 11355 164 10743 21654;21655 17383 17383 1 9606 Homo sapiens -0.015873967982543036 GVDLSGNDFK Unmodified 1050.4982 0.49818889 3831 Q13045-2;Q13045;J3KS54;J3KS39 FLII Protein flightless-1 homolog yes no 0 0 0 5 0 1 51.001 51.076 2 0.0097776 14231 20230619_1885_Aki_TMTPro18x_K_F5 93.667 61.446 44442 44422 44647 45175 42872 50079 52207 53127 65270 59857 65635 65874 64353 61256 62681 68988 78287 72874 41153 40657 45322 45660 44959 50354 52506 54236 65741 60329 67272 66456 65704 63722 64660 69406 74716 69195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18643000 11356 3831 10744 21656 17384 17384 1 9606 Homo sapiens -0.025040281787141794 GVDLVLNSLAEEK Unmodified 1385.7402 0.74021007 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 5 0.816 1 1 1 62.959 62.993 3 9.7314E-06 19453 20230619_1886_Aki_TMTPro18x_K_F6 120.59 94.205 338920 289640 323970 323460 291240 327600 357870 301640 349220 405820 396070 364180 388010 325370 384970 437130 461830 447150 313370 265440 329870 324060 306870 330490 356710 312920 358390 403210 403680 370410 396160 342930 396040 437860 441030 424650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5058600000 11357 3606 10745 21657;21658;21659 17385;17386 17386 2 9606 Homo sapiens 0.06276957386717186 GVDRIDENYSLPTCK Unmodified 1765.8305 0.83049842 1873 B4DWG1;A0A994J542;B3KM47;Q9Y6Y8;Q9Y6Y8-2;B3KN10 SEC23IP SEC23-interacting protein yes no 0 0 1 5.5 0.5 1 1 48.435 48.513 3 3.0046E-05 13257 20230619_1886_Aki_TMTPro18x_K_F6 103.39 83.809 47824 45829 46475 46923 53055 52920 59685 63241 57574 64328 63026 52628 69235 50107 57218 69878 68246 59726 44258 41952 47426 47421 54702 53329 59743 63885 59038 64565 64606 53934 69839 52854 59069 69297 65131 56867 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89594000 11358 1873 10746 21660;21661 17387 17387 1 9606 Homo sapiens -0.021783613471143326 GVEAGPDLLQ Unmodified 997.50803 0.50802529 1680 A0A7I2YQN2;O60506-3;Q59GL1;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2YQV8;B7Z213;H0YAA0 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 2.5 0.5 1 1 56.542 56.569 2 1.2897E-06 17179 20230619_1881_Aki_TMTPro18x_K_F2 175.44 161.45 138740 119130 133860 132420 141000 158640 144630 150450 156840 159410 151100 152500 173760 147580 164160 185780 175680 180080 128290 109170 136480 133040 146030 158260 146040 154460 158960 160420 156330 155010 176180 154420 167850 185700 168010 171090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 879740000 11359 1680 10747 21662;21663 17388;17389 17388 2 9606 Homo sapiens 0.00917159826678926 GVEAVAIHGGK Unmodified 1036.5665 0.56654322 2396 B3KRK2;Q53HI2;Q9UJV9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes no 0 0 0 6.5 0.5 1 1 40.095 40.174 3 0.00012249 9354 20230619_1887_Aki_TMTPro18x_K_F7 99.283 68.41 92207 65495 78545 93304 89793 108540 100340 99265 142310 121300 134370 137240 149680 121690 117500 162650 144260 145760 85087 60217 81203 92090 92845 108340 101820 102640 142220 121970 138870 138140 150730 128190 121780 161710 137770 138620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80492000 11360 2396 10748 21664;21665 17390 17390 1 9606 Homo sapiens 0.04972261191801408 GVEAVGSYAENQR Unmodified 1378.6477 0.64770667 3829 Q12996;B4DMA4;E9PLP8 CSTF3 Cleavage stimulation factor subunit 3 yes no 0 0 0 3.33 0.471 2 1 41.692 41.748 2;3 5.8075E-15 10355 20230619_1882_Aki_TMTPro18x_K_F3 240.37 211.41 94913 80845 109510 116660 127710 128130 127580 124690 121210 134440 164000 150470 136920 117040 147850 137410 152890 143400 87898 74289 110330 114980 131020 128610 128500 127900 125560 135770 165010 150940 141100 122900 150370 138140 146170 136170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 179340000 11361 3829 10749 21666;21667;21668 17391;17392 17391 2 9606 Homo sapiens -0.026471276267557187 GVEEEEEDGEMRE Oxidation (M) 1552.5835 0.58351101 3715 P62306 SNRPF Small nuclear ribonucleoprotein F yes yes 0 1 1 1 0 4 34.407 34.407 2;3 2.7353E-05 8235 20230619_1880_Aki_TMTPro18x_K_F1 113.07 112.84 43041 32945 28604 45772 47904 54453 51829 40019 58366 39329 56606 48605 48792 46133 33420 60678 57245 56215 39672 30273 30665 45228 48388 54057 52167 41914 58919 40131 57735 48923 49373 48401 35722 60407 54534 53444 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 796340000 11362 3715 10750 21669;21670;21671;21672 17393;17394;17395;17396 17395 2399 4 9606 Homo sapiens -0.17067740356560535 GVEEEEEDGEMRE Unmodified 1536.5886 0.58859639 3715 P62306 SNRPF Small nuclear ribonucleoprotein F yes yes 0 0 1 1 0 1 38.455 38.455 2 1.8144E-35 9378 20230619_1880_Aki_TMTPro18x_K_F1 275.48 259.85 80581 68879 83909 83744 97500 114600 96480 94509 129080 112110 117630 111400 126410 96592 95553 129340 136270 117420 74557 63175 85176 83751 100270 113070 98331 98386 129180 112410 121520 112670 127240 101890 100130 128680 129850 111720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 452130000 11363 3715 10750 21673 17397 17397 1 9606 Homo sapiens -0.15823436493928966 GVEGLIDIENPNR Unmodified 1424.726 0.72595699 3851 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 0 3.5 0.5 2 2 56.558 56.579 2;3 7.886E-23 17009 20230619_1882_Aki_TMTPro18x_K_F3 195.77 183.85 200020 149940 174820 207670 172670 220520 198350 210930 217350 223950 240720 243950 267480 215890 247620 270540 265930 286230 184670 137790 179880 205060 180510 221660 199170 216490 221340 226220 247090 245870 271120 226590 253290 271800 254410 271620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2612500000 11364 3851 10751 21674;21675;21676;21677 17398;17399 17398 2 9606 Homo sapiens 0.030583049584492983 GVEICIATPGR Unmodified 1171.6019 0.60194245 1328;3137 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7;P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3KRZ1;J3QSF1 DDX17;DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 no no 0 0 0 4.71 2.37 1 1 1 1 1 1 1 49.462 49.519 2 0.00021109 14151 20230619_1880_Aki_TMTPro18x_K_F1 145.89 92.716 946280 756900 829070 891690 747480 901450 911730 893560 949310 1012900 972270 914560 1074100 860580 888430 1087600 1106000 1105200 873980 694180 851180 889740 788070 910600 911140 916700 966440 1014200 1000500 931420 1084000 901960 919770 1089600 1056100 1049500 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1917799999.9999998 11365 1328;3137 10752 21678;21679;21680;21681;21682;21683;21684 17400;17401;17402;17403;17404;17405 17400 6 9606 Homo sapiens 0.023005556573025387 GVEKPPHLAALILAR Unmodified 1583.9511 0.95114632 3998 Q53GF0;Q8NFW8;F5H296;Q8NFW8-2 CMAS N-acylneuraminate cytidylyltransferase yes no 0 0 1 4 0 1 51.901 51.929 4 5.7389E-06 14883 20230619_1883_Aki_TMTPro18x_K_F4 119.54 89.735 51616 44773 50347 54244 48262 60972 61591 62556 75132 62495 65241 65431 68691 62210 59643 68751 69663 73141 47736 41062 51259 54099 50731 61160 61739 63788 75334 63280 67548 66193 69606 64614 61412 69206 66580 69410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110840000 11366 3998 10753 21685 17406 17406 1 9606 Homo sapiens 0.1825287921931249 GVEPSPSPIKPGDIK Unmodified 1519.8246 0.8246084 4010 Q541A5;Q92890;Q92890-1;B7Z9N3;B4E3I3;Q92890-3;C9JNP9 ufd1;UFD1L Ubiquitin fusion degradation protein 1 homolog yes no 0 0 1 7.5 0.5 1 1 47.717 47.79 3 7.7857E-06 12560 20230619_1887_Aki_TMTPro18x_K_F7 116.79 103.55 169360 128010 148920 170690 152640 184670 179900 175480 201000 203340 199090 199030 216810 175770 184380 242600 209900 223380 156370 117580 153200 169010 159170 185400 180450 180660 203570 203880 205110 201540 219140 185630 189800 241460 200680 212320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 149950000 11367 4010 10754 21686;21687 17407;17408;17409 17407 3 9606 Homo sapiens 0.08548908203511019 GVETCGILCGK Unmodified 1192.558 0.55802872 1231 O95630;A0A804HJ64;A0A804HL27;A0A140VK54;A0A804HKA6;A0A804HJS0;A0A804HHU9;A0A804HIJ2;A0A804HII8;A0A804HHV2;F5H5B9;A0A804HJC8;A0A804HI64;A0A804HIF8;C9JK83;O95630-2;A0A804HIV0 STAMBP STAM-binding protein yes no 0 0 0 7 0 1 50.091 50.173 3 0.048333 13658 20230619_1887_Aki_TMTPro18x_K_F7 55.401 35.194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11368 1231 10755 21688 17410 17410 1 9606 Homo sapiens -0.03054796831315798 GVEVHIVADATSSR Unmodified 1439.7369 0.73685603 4332 Q96CN7;Q9Y3B5 ISOC1 Isochorismatase domain-containing protein 1 yes no 0 0 0 5 2 1 1 1 1 1 1 1 42.463 42.526 3 4.5896E-09 10564 20230619_1885_Aki_TMTPro18x_K_F5 162.88 147.01 170050 141870 168500 193600 208470 208760 203990 204480 268950 203460 232850 244250 238850 212890 211500 229040 332310 273590 157250 130300 172030 191400 213190 209870 207900 209200 268670 207060 240910 245030 242520 221500 222270 232350 316380 259600 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 455980000 11369 4332 10756 21689;21690;21691;21692;21693;21694;21695 17411;17412;17413;17414;17415 17412 5 9606 Homo sapiens 0.034577073327454855 GVEVTVGHEQEEGGK Unmodified 1553.7322 0.73216458 987 P0DPI2-2;A0A0B4J2D5-2;P0DPI2;A0A140VKB0;A0A0B4J2D5;H7C1F6;H7C2G3 C21orf33 yes no 0 0 0 2.5 0.5 1 1 39.027 39.088 3 3.2832000000000004E-33 9376 20230619_1881_Aki_TMTPro18x_K_F2 203.27 177.95 118450 84876 108600 124870 131200 139510 148510 134660 207480 117300 136450 173620 168860 141720 128620 188300 223720 248570 109360 78064 111600 122950 135030 139810 150420 137520 204900 121390 144960 172640 169550 149770 137080 191610 213310 235360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106920000 11370 987 10757 21696;21697 17416 17416 1 9606 Homo sapiens -0.022552216006715753 GVEVTVGHEQEEGGKWPYAGTAEAIK Unmodified 2741.3297 0.32967358 987 P0DPI2-2;A0A0B4J2D5-2;P0DPI2;A0A140VKB0;A0A0B4J2D5;H7C1F6;H7C2G3 C21orf33 yes no 0 0 1 4.5 0.5 1 1 52.028 52.076 4 3.7172E-13 14684 20230619_1885_Aki_TMTPro18x_K_F5 122.41 109.48 25989 24826 29005 29865 26379 30752 34544 30656 30565 28760 27792 32818 29165 27043 34883 29571 32283 33399 24080 22759 29186 29764 27811 31025 34229 31293 31252 29288 28764 32916 30009 28212 35197 29909 30921 31677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145690000 11371 987 10758 21698;21699 17417 17417 1 9606 Homo sapiens 0.028661929054123902 GVFNSGLK Unmodified 820.4443 0.44430282 4365 Q96I99;Q3ZCW5;E9PDQ8;Q96I99-2;B7Z2D5 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 6.5 0.5 1 1 40.649 40.729 3 0.057189 9803 20230619_1886_Aki_TMTPro18x_K_F6 49.423 6.4228 201370 155850 170370 181430 214450 216260 212560 205340 267250 247940 279370 286640 301980 231770 247950 336510 373370 324410 185900 142940 176360 181610 219210 215880 216080 211670 269620 249510 287040 287520 304900 246490 260460 335500 355690 308440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215240000 11372 4365 10759 21700;21701 17418 17418 1 9606 Homo sapiens 0.02689844180235923 GVFVVAAK Unmodified 789.47487 0.47487467 2292 B2RB23;P42765;B3KNP8 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes no 0 0 0 3 0 1 52.009 52.075 3 0.0039453 15080 20230619_1882_Aki_TMTPro18x_K_F3 94.407 70.85 58014 49769 56608 64815 76797 82733 80360 78447 98137 68875 71415 85050 75655 67043 71810 82591 75652 83629 53649 45680 57987 64436 78273 82191 81316 80180 97826 70662 74814 84975 76932 70546 73365 82776 72401 79391 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107330000 11373 2292 10760 21702 17419 17419 1 9606 Homo sapiens 0.07171622565272173 GVGADPEAR Unmodified 870.41954 0.41954463 3663 Q6PJJ2;P56182;Q53FR7;Q96J73 RRP1 Ribosomal RNA processing protein 1 homolog A yes no 0 0 0 1.5 0.5 1 1 31.392 31.424 2 0.012227 6591 20230619_1880_Aki_TMTPro18x_K_F1 81.119 55.225 11530 6414.8 12436 13510 17872 22385 16410 19984 16335 12183 16458 19148 17082 14035 15244 7386.6 18621 20211 10647 5937.6 12651 13160 18109 21880 16635 20356 16636 12943 16927 18928 17324 14314 15675 8273.5 17795 19055 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17768000 11374 3663 10761 21703;21704 17420 17420 1 9606 Homo sapiens -0.020848356931537637 GVGAEPLLPWNR Unmodified 1307.6986 0.69862003 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 0 0 3.67 3.09 1 1 1 58.329 58.349 2 4.17E-09 17815 20230619_1880_Aki_TMTPro18x_K_F1 170.5 151.52 184750 155460 186140 179920 167990 196830 215770 215150 206790 236200 225030 203560 255670 211080 209380 252850 241910 255480 170880 142530 188700 180020 177210 198170 214560 219040 212080 236530 231210 208500 257730 219790 215770 253440 231240 242580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 283990000 11375 2350 10762 21705;21706;21707 17421;17422 17421 2 9606 Homo sapiens 0.057078662087405974 GVGASGSFR Unmodified 836.41407 0.41406533 3399 P07305;P07305-2 H1F0 Histone H1.0;Histone H1.0, N-terminally processed yes no 0 0 0 6.5 1.12 1 1 1 1 35.037 35.089 2 2.6106E-08 7497 20230619_1888_Aki_TMTPro18x_K_F8 208.35 101.99 553280 401180 471940 485600 534250 454310 684600 714670 738900 322050 362790 322350 356300 320970 524090 267840 463800 315490 510620 368180 487180 483490 553060 467990 682830 701450 733120 346930 389840 327540 372100 328350 525130 273590 443310 299690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 705520000 11376 3399 10763 21708;21709;21710;21711 17423;17424;17425 17425 3 9606 Homo sapiens -0.010685144849617245 GVGCLDFSK Unmodified 981.45897 0.45896661 4548 Q9HC35;B5MBZ0;Q9HC35-2;B6EXY3;C1PHA1;J7MA22;C1PHA0 EML4;EML4-ALK variant 7;EML4-ALK;EML4-ALK variant 6 Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 0 7.5 0.5 1 1 52.445 52.519 2 0.00037392 14617 20230619_1888_Aki_TMTPro18x_K_F8 138.1 96.795 269790 221420 222840 214330 184050 222840 191200 181670 198620 251840 254790 250080 249250 213480 236920 291280 267900 269180 249120 202700 229600 217320 194720 223890 192790 190400 204410 250630 258510 252770 253990 225500 243150 290060 256030 255900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 375790000 11377 4548 10764 21712;21713 17426 17426 1 9606 Homo sapiens -0.032504517339248196 GVGDDQLGEESEERDDHLLPM Unmodified 2340.0176 0.017583497 3481 P20645;F5GX30;Q53GY9;B2R6S2;Q96AH2;H0YF90 M6PR Cation-dependent mannose-6-phosphate receptor yes no 0 0 1 1 0 1 53.692 53.692 3 7.0966E-05 15874 20230619_1880_Aki_TMTPro18x_K_F1 83.039 79.288 77055 65407 79382 81836 65610 89504 91100 88129 91483 102980 92689 105110 108650 86228 95395 112180 106960 123160 71285 60010 80286 81404 70027 89848 90402 90529 93305 103300 95835 105920 109720 90994 97973 112870 102340 116810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 283120000 11378 3481 10765 21714 17427 17427 1 9606 Homo sapiens -0.0988245911089507 GVGDGTVSWGLEDDEDMTLTR Oxidation (M) 2267.9852 0.98522074 1895;3100 A0M8W4;Q15819;Q13404-8;H0YBX6;E5RIF1;D6RG00;I3L0A0;Q13404;Q13404-7;Q13404-2;Q13404-1 UBE2V2;UBE2V1;TMEM189-UBE2V1 Ubiquitin-conjugating enzyme E2 variant 2;Ubiquitin-conjugating enzyme E2 variant 1 no no 0 1 0 1 0 1 58.676 58.676 3 9.2744E-23 17933 20230619_1880_Aki_TMTPro18x_K_F1 176.87 168.69 26096 18916 18678 28991 25269 27031 24821 26210 24238 23871 28656 21369 28822 23098 26038 29889 27903 27166 24056 17406 19751 28394 25720 27454 25039 26777 24900 24176 29152 21915 29266 24135 26651 29763 26674 25834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 548540000 11379 1895;3100 10766 21715 17428 17428 1212 1 9606 Homo sapiens -0.09805246513815291 GVGDSFK Unmodified 708.34425 0.34425443 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2;B7Z602 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 5 0 1 43.288 43.368 2 0.012368 10932 20230619_1885_Aki_TMTPro18x_K_F5 102.71 27.403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11380 874 10767 21716 17429 17429 1 9606 Homo sapiens -0.021583931535701595 GVGIISEGNETVEDIAAR Unmodified 1828.9167 0.91667089 3387;959 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z1Q9;B7Z3F8;B3KV59;B3KNQ8;P05023;P05023-4;P05023-3;B7Z3V1;B3KRI1;B2RAQ4;P50993;B1AKY9;A0A0S2Z3W6;B7Z1N5;H0Y7C1;B3KX35;B3KW93;B4DIQ8 ATP1A3;ATP1A1;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2 no no 0 0 0 2 0.816 1 1 1 57.017 57.034 3 2.1441E-85 17387 20230619_1881_Aki_TMTPro18x_K_F2 282.55 243.91 102680 88122 106520 116130 119030 127070 131010 130810 152080 133010 134230 133020 148650 116690 139260 164000 152200 159890 95000 80891 108140 115110 122940 127740 132040 133430 153000 134330 139200 134570 150770 123460 142630 163730 145550 151880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 750480000 11381 959;3387 10768 21717;21718;21719 17430;17431;17432 17431 3 9606 Homo sapiens 0.0353692175924607 GVGISVLEMSHR Unmodified 1283.6656 0.66560534 183 A0A024R222;B4DHQ3;Q9Y617;A0A024R280;Q9Y617-2 PSAT1 Phosphoserine aminotransferase yes no 0 0 0 4.5 3.5 1 1 48.774 48.807 3 2.1175E-24 13878 20230619_1880_Aki_TMTPro18x_K_F1 257.13 230.34 46838 46829 47638 39427 39506 46954 42625 42941 44172 55155 52741 58512 53286 47982 59995 56289 53345 62395 43376 42798 48151 40590 41783 46856 42885 44465 45314 55164 53797 58855 54690 50279 60505 56787 51167 59166 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 222480000 11382 183 10769 21720;21721 17433;17434 17433 2 9606 Homo sapiens 0.03511916094385015 GVGISVLEMSHR Oxidation (M) 1299.6605 0.66051996 183 A0A024R222;B4DHQ3;Q9Y617;A0A024R280;Q9Y617-2 PSAT1 Phosphoserine aminotransferase yes no 0 1 0 7.5 0.5 1 1 44.471 44.522 3 0.0017592 11315 20230619_1888_Aki_TMTPro18x_K_F8 74.392 62.167 55574 44007 51173 51112 54172 61232 54783 56428 66313 74146 78869 74591 79707 76717 74704 88204 87425 80911 51344 40356 52392 51181 56087 61048 55583 58436 67443 74005 80335 75810 81153 79622 76826 88014 83480 76951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193220000 11383 183 10769 21722;21723 17435 17435 117 1 9606 Homo sapiens 0.022676122317534464 GVGQAAIR Unmodified 770.43989 0.43988615 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9 VCL;HEL114 Vinculin yes no 0 0 0 7 0.816 1 1 1 33.492 33.532 2 0.0025071 6712 20230619_1887_Aki_TMTPro18x_K_F7 125.62 43.761 101470 58165 102960 120820 202750 228170 170780 188390 232770 69457 74869 69864 79276 62647 114210 58096 94703 66063 93662 53817 106120 118090 201970 221460 175770 191870 226850 76918 84487 70756 82465 64659 114120 59094 90602 62768 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81932000 11384 51 10770 21724;21725;21726 17436 17436 1 9606 Homo sapiens 0.04548379757318344 GVGSGGQGPPPPR Unmodified 1161.5891 0.58906958 1307 P48634;A0A1U9X982;A0A1U9X9A9;A0A1U9X999;A0A1U9X998;A0A1U9X993;A0A1U9X988;A0A1U9X996;A0A1U9X985;A0A1U9X977;A0A1U9X975;A0A1U9X974;A0A1U9X9A5;A0A1U9X987;A0A1U9X972;P48634-3;P48634-2;B4DLY2 PRRC2A Protein PRRC2A yes no 0 0 0 6.5 0.5 1 1 31.598 31.663 2 7.1572E-06 6358 20230619_1886_Aki_TMTPro18x_K_F6 137.98 117.07 7478.9 4041.5 8350.4 11627 8648.1 13461 8852.9 10677 12014 8740.4 13462 11947 11233 9549.5 7737.3 5431.8 15450 13697 6907.5 3764.7 8438.9 11118 8999.3 13381 9019 11048 12097 9041.6 13628 11898 11375 9724.1 8340 5995 14696 12929 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7682900 11385 1307 10771 21727;21728 17437;17438 17437 2 9606 Homo sapiens 0.01473860589430842 GVGTDEACLIEILASR Unmodified 1702.856 0.85598488 4024 Q6ICS0;Q59EP1;B4DPJ2;Q5T0G8;P50995-2;P50995;B7Z6L0 ANXA11 Annexin;Annexin A11 yes no 0 0 0 4.5 0.5 1 1 63.842 63.868 3 2.4741E-11 19964 20230619_1883_Aki_TMTPro18x_K_F4 160.5 151.71 45163 32342 21370 37963 37805 21536 23618 36589 28454 39948 40854 22879 40594 38395 40896 52276 46795 47913 41546 29674 23994 37661 37504 23436 24829 36400 29278 39648 41204 24639 41482 39827 41971 52025 44723 45550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 347550000 11386 4024 10772 21729;21730 17439;17440 17439 2 9606 Homo sapiens 0.03267113175297709 GVGVFGDMAQDTGIPADIWR Unmodified 2104.0048 0.004774387 2037 A8K492;P56192;B4DF61 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 64.32 64.358 3 3.0655E-11 20103 20230619_1886_Aki_TMTPro18x_K_F6 126.8 103.12 14724 9830.3 14369 16075 13619 13369 15837 15816 18365 16273 17075 18063 17710 17880 17627 16904 15330 21587 13596 9056.1 14623 15679 14254 13777 15920 16007 18509 16479 17618 18244 18066 18393 17797 17269 14733 20431 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239030000 11387 2037 10773 21731;21732 17441 17441 1 9606 Homo sapiens -0.003067809218009643 GVHGGILNK Unmodified 893.5083 0.50830006 3678 P60673 PFN3 Profilin-3 yes yes 0 0 0 2 0 1 38.29 38.353 3 7.3659E-11 9056 20230619_1881_Aki_TMTPro18x_K_F2 161.9 89.665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11388 3678 10774 21733 17442 17442 1 9606 Homo sapiens 0.057286243371777346 GVIDLIFEK Unmodified 1032.5855 0.58554733 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;C9J2Z7;C9K073 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 7.5 0.5 1 1 64.112 64.137 2 0.00013235 19586 20230619_1888_Aki_TMTPro18x_K_F8 150.36 88.162 440740 316680 354810 399710 284480 362650 412030 398890 457560 485190 396160 390960 510000 401480 329350 605270 470930 502910 406580 290760 366870 396390 305090 370250 409430 407350 461500 482830 414100 401830 508270 424680 347450 598340 449430 478640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 292810000 11389 1676;2901 10775 21734;21735 17443;17444 17444 2 9606 Homo sapiens 0.07055797762859584 GVIPMNAK Unmodified 828.45276 0.45275902 4728 Q9Y3I0;B4DNA0 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 2 0 1 46.735 46.815 2 0.0025568 12978 20230619_1881_Aki_TMTPro18x_K_F2 138.07 101.52 220920 172820 208940 214650 231460 277360 261230 238870 305920 176030 184090 142540 158620 122580 181520 206870 196010 132550 204130 158600 213670 214140 239680 274740 262880 245030 303810 180530 193280 145880 163800 131520 185100 202300 186960 126910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140000000 11390 4728 10776 21736 17445 17445 1 9606 Homo sapiens 0.03167074825205418 GVIQVYDLGQDGQGMSR Oxidation (M) 1837.8629 0.86286118 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2 NUP155 Nuclear pore complex protein Nup155 yes no 0 1 0 5 0 1 53.159 53.231 3 0.016177 15166 20230619_1885_Aki_TMTPro18x_K_F5 50.493 34.609 61141 48697 63340 63506 61429 56790 59262 64009 60353 49336 60142 50272 45752 39050 65758 62636 49256 46048 56543 44708 64109 62844 63798 58126 59963 64509 61363 50666 61061 50702 48087 41867 65591 61650 47265 43924 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103450000 11391 81 10777 21737 17446 17446 37 1 9606 Homo sapiens -0.02255573944171374 GVIQVYDLGQDGQGMSR Unmodified 1821.8679 0.86794655 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 6 0 1 55.759 55.836 3 1.6484E-14 16379 20230619_1886_Aki_TMTPro18x_K_F6 168.47 144.64 44333 38102 38748 46458 38092 44724 52098 46082 53668 59283 51949 56222 55212 47464 57687 55534 63846 63418 40963 34948 39875 46206 40018 45388 51744 47357 54557 59099 53573 56876 56377 49695 58942 56126 61025 60153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104950000 11392 81 10777 21738 17447 17447 1 9606 Homo sapiens -0.010112700815398057 GVISDILDWK Unmodified 1144.6128 0.61282471 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8;B4DIG6;B4DWK9;B4DIW1;B4DK31;B4DIR2 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 7 0 1 64.345 64.375 3 0.0030027 19811 20230619_1887_Aki_TMTPro18x_K_F7 86.624 60.026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11393 3833 10778 21739 17448 17448 1 9606 Homo sapiens 0.04630281303229822 GVIVSTR Unmodified 730.43374 0.43373813 3260 O43660-2;O43660;H0YA24 PLRG1 Pleiotropic regulator 1 yes no 0 0 0 8 0 1 36.217 36.204 2 0.015107 7951 20230619_1888_Aki_TMTPro18x_K_F8 111.73 14.656 84631 53807 72975 76023 98642 92523 87520 87345 127890 83926 99082 90613 104750 81080 85880 83402 117870 85833 78058 49492 75481 75147 100110 92208 90099 89490 126710 85310 103170 91391 105820 84112 89392 83936 112250 81616 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43619000 11394 3260 10779 21740 17449 17449 1 9606 Homo sapiens 0.057738615258131176 GVLFYGPPGCGK Unmodified 1250.6118 0.61177885 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;Q9NTC4;Q9HAP0 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 3.5 0.5 1 1 55.833 55.858 2 4.8136E-07 16691 20230619_1882_Aki_TMTPro18x_K_F3 194.2 162.19 200740 167710 193230 198450 194010 214750 222710 216160 214410 246880 243520 236140 281540 210670 246340 301760 259680 273240 185590 153790 196970 198160 202180 215980 222690 221550 220280 247450 250120 239500 284260 223080 252170 300010 248420 259780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 355650000 11395 3656 10780 21741;21742 17450;17451 17450 2 9606 Homo sapiens -0.0035025633733312134 GVLLFGPPGTGK Unmodified 1141.6495 0.64954457 1235 C9JX88;A0A140VK70;P35998;Q75L23;P35998-2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 4 0 1 60.343 60.346 3 5.8931E-05 18427 20230619_1883_Aki_TMTPro18x_K_F4 116.55 92.941 95295 85228 95215 108710 98020 119500 108530 107910 122280 129610 119770 120930 136240 107060 117550 143850 126490 137690 88167 78196 96871 107970 101970 119730 109260 111620 123790 129560 123730 122700 137580 112880 120510 143530 121020 130810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238690000 11396 1235 10781 21743 17452 17452 1 9606 Homo sapiens 0.08438577919810086 GVLLMLFGGVPK Unmodified 1229.7206 0.72060102 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 7.5 0.5 1 1 66.05 66.072 3 2.0532E-05 20374 20230619_1888_Aki_TMTPro18x_K_F8 123.63 73.342 57100 47566 60290 45640 34871 51376 51897 42904 61355 49424 47825 48772 56652 48586 69468 43319 40785 40391 52829 43541 60520 46390 38793 51325 51643 44622 61394 49628 50141 49505 58118 49841 68684 43555 39298 38396 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71626000 11397 3892 10782 21744;21745 17453;17454 17454 2 9606 Homo sapiens 0.11492954632967667 GVLLTDGSEK Unmodified 1017.5342 0.53424004 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A994J4Z2;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;Q59FZ6;A0A2R8YF80;A0A2R8YGP5;B4E0F1;B4DSI8;B3KNW7;A0A2R8Y523;A0A2R8YFV8;A0A2R8Y4R6;A0A2R8YCY3 SMARCA4 Transcription activator BRG1 yes no 0 0 0 4.2 0.748 1 2 2 48.202 48.26 2;3 3.8224E-07 13150 20230619_1883_Aki_TMTPro18x_K_F4 147.4 76.497 129240 121840 110040 118680 119950 134590 135320 125050 160310 154310 152430 145180 161060 140660 149130 167830 182100 153410 119470 111490 113600 120400 124310 134750 136290 129210 161610 154150 157100 147680 163610 146660 153770 167370 173710 145970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 240840000 11398 1348 10783 21746;21747;21748;21749;21750 17455;17456;17457 17456 3 9606 Homo sapiens 0.02617428998144078 GVLLYGPPGCGK Unmodified 1216.6274 0.62742892 1687 A0A7P0T7Z9;A0A7P0T9B4;A0A7P0TAM5;A0A7P0T9U2;Q8NBU5-2;Q8NBU5;B4E2J1 ATAD1 ATPase family AAA domain-containing protein 1 yes no 0 0 0 3 0 1 53.911 53.964 3 0.00014211 15927 20230619_1882_Aki_TMTPro18x_K_F3 85.958 76.744 80909 58061 71229 81690 70006 79894 91523 97815 100350 88009 90407 96378 91889 87384 91223 106070 97456 108870 74683 53373 73223 80527 73430 81300 91308 98410 101290 89718 93351 97181 93780 91382 93206 106400 93264 103340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182720000 11399 1687 10784 21751 17458 17458 1 9606 Homo sapiens 0.027780301797065476 GVLLYGPPGTGK Unmodified 1157.6445 0.64445919 1202;1638 A0A6Q8PGU6;Q8NB90-2;Q8NB90;Q8NB90-3;P62195;A0A140VJS3;P62195-2;A0A994J6V8;Q59GS3;J3QSA9;J3KRP2;J3QQM1;J3QRR3;J3QLH6;J3QRW1 SPATA5;PSMC5 Spermatogenesis-associated protein 5;26S protease regulatory subunit 8 no no 0 0 0 2.67 0.471 1 2 53.376 53.416 3 2.1535E-05 16210 20230619_1882_Aki_TMTPro18x_K_F3 105.46 0 36528 27145 34740 42324 34004 44193 45085 35539 40362 41246 40791 47269 46518 36607 39840 50685 42992 46662 33744 24981 35490 41481 35709 44314 44648 37103 41416 41563 42131 47341 46959 38858 40865 50450 41129 44349 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 277370000 11400 1638;1202 10785 21752;21753;21754 17459;17460 17460 2 9606 Homo sapiens 0.07194274057178518 GVLMYGPPGCGK Oxidation (M) 1250.5788 0.57876417 2016 A8K2M0;P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 1 0 2 0 1 49.142 49.207 2 0.015021 14069 20230619_1881_Aki_TMTPro18x_K_F2 94.114 78.964 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11401 2016 10786 21755 17461 17461 1263 1 9606 Homo sapiens -0.03650206451698068 GVLMYGPPGTGK Unmodified 1175.6009 0.60087982 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PM69;E9PKD5;E9PMD8;E9PN50 PSMC3 26S protease regulatory subunit 6A yes no 0 0 0 3 0 1 53.174 53.233 3 0.0016234 15603 20230619_1882_Aki_TMTPro18x_K_F3 81.625 61.863 134170 113540 122170 135290 128340 151350 156360 147580 164740 154670 172140 156010 177650 140350 151040 189580 173800 186400 124000 104120 125300 135070 133650 151730 156260 151230 167600 155990 176380 157940 179810 147950 155540 189410 166160 177030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92136000 11402 4761 10787 21756 17462 17462 1 9606 Homo sapiens 0.020103412883827332 GVLNSPVK Unmodified 812.4756 0.47560295 49 G5EA31;A0A024QZM6;P53992;B7ZAY6;P53992-2 SEC24C Protein transport protein Sec24C yes no 0 0 0 1 0 1 45.015 45.015 2 2.0125E-05 12291 20230619_1880_Aki_TMTPro18x_K_F1 137.9 42.552 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11403 49 10788 21757 17463 17463 1 9606 Homo sapiens 0.061864172143259566 GVLQGLSGR Unmodified 885.50321 0.50321468 4756 Q9Y6C2 EMILIN1 EMILIN-1 yes yes 0 0 0 2.5 0.5 1 1 45.571 45.65 2 0.0011961 12125 20230619_1882_Aki_TMTPro18x_K_F3 118.06 90.323 120480 105410 124070 124110 109290 136190 125800 127490 167790 205220 270460 345060 242510 234970 296160 238780 272620 296250 111480 96644 125530 123990 115320 136600 127300 132990 172640 207360 272040 339850 251050 246030 298600 243330 261230 280680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 282010000 11404 4756 10789 21758;21759 17464 17464 1 9606 Homo sapiens 0.05588320474578268 GVLQSLIEK Unmodified 985.5808 0.5807963 1925 A3KN83-4;A3KN83-3;A3KN83-2;A3KN83 SBNO1 Protein strawberry notch homolog 1 yes no 0 0 0 1 0 1 60.529 60.529 3 0.0017778 18720 20230619_1880_Aki_TMTPro18x_K_F1 91.867 59.646 21187 17883 23740 23883 18770 24587 21468 22939 27299 23055 24405 21678 25402 20278 23621 27849 29016 25101 19615 16419 23832 23634 19995 24758 21685 23552 27352 23263 25200 22047 25808 21368 24371 27697 27683 23885 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6602400 11405 1925 10790 21760 17465 17465 1 9606 Homo sapiens 0.08742913620108084 GVLQTAAER Unmodified 943.50869 0.50869399 2710 Q8TEQ6;B7ZLC9 GEMIN5 Gem-associated protein 5 yes no 0 0 0 4.5 0.5 1 1 38.13 38.198 2 9.3903E-05 8783 20230619_1885_Aki_TMTPro18x_K_F5 156.62 110.73 70181 48732 56849 65518 75040 91016 67576 69059 95720 88451 96046 102040 109560 92387 75329 122690 118180 107630 64731 44781 59190 65078 76461 89563 69432 72572 95943 88818 99103 102690 109800 97187 79824 121820 112590 102430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114820000 11406 2710 10791 21761;21762 17466 17466 1 9606 Homo sapiens 0.03467999266365496 GVLSAFNFGTVPSNN Unmodified 1522.7416 0.74160705 3244 O15397-2;O15397 IPO8 Importin-8 yes no 0 0 0 3 0 1 64.986 65.018 3 0.0003838 20547 20230619_1882_Aki_TMTPro18x_K_F3 72.321 57.12 7921.6 4986.8 5597.5 7884.7 6551.9 7929.5 6516.4 8311.4 8316.4 8728.7 10858 7602.4 11201 8440.5 8006 9906.4 9714.9 11030 7296.6 4593.3 5907.6 7718.5 6744.1 8017.7 6634.4 8470.3 8471.2 8764.8 11008 7813.8 11261 8765.9 8302.5 9987.8 9287.7 10460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12683000 11407 3244 10792 21763 17467 17467 1 9606 Homo sapiens 0.0011459147553978255 GVLSQAMVMCASSPEK Oxidation (M) 1709.7787 0.77866254 1746 A0A8C8MUD1;Q12904;Q12904-2;B4DNK3;A0A8C8KIA0;A0A804HJ47;A0A5F9ZHC5 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 1 0 8 0 1 51.652 51.729 3 0.01929 14263 20230619_1888_Aki_TMTPro18x_K_F8 55.851 42.733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11408 1746 10793 21764 17468 17468 1140 1 9606 Homo sapiens -0.04783564356898751 GVLTGPEYEALDALPDAERR Unmodified 2171.0859 0.08586148 3063 H3BM67;H3BUP2;H3BUN4;Q5TZN6;O60936;O60936-3;O60936-1;H3BQJ5 NOL3 Nucleolar protein 3 yes no 0 0 1 2.5 0.5 1 1 58.204 58.227 3 2.9333000000000003E-55 17677 20230619_1882_Aki_TMTPro18x_K_F3 285.5 257.79 57965 45082 54141 59328 58092 68200 66944 61424 72181 72432 73037 75014 72648 68020 78551 81834 77331 92095 53552 41397 55419 58845 60302 68119 67134 63529 73285 72701 74919 75801 74479 71118 79730 82576 74104 87309 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138150000 11409 3063 10794 21765;21766 17469;17470 17470 2 9606 Homo sapiens 0.04716198321966658 GVNCIDYYSGGDKPYLISGADDR Unmodified 2534.1384 0.13836733 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258;B4E2C9;A0A7I2V3G0;A0A7I2YQF9 COPB2 Coatomer subunit beta' yes no 0 0 1 5.5 0.5 1 1 55.635 55.705 3 6.4829E-26 16311 20230619_1886_Aki_TMTPro18x_K_F6 176.84 165.2 151610 132360 151350 173410 137250 178490 184570 174700 157440 237380 223690 217730 249130 189690 200560 257150 223180 220770 140250 121480 153750 171780 145050 179940 182570 180430 164920 235770 227440 221000 250960 200240 206360 255130 213300 210090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 203220000 11410 3031 10795 21767;21768 17471;17472 17472 2 9606 Homo sapiens -0.06733631397446516 GVNEDTYSGILDCAR Unmodified 1668.7413 0.74134906 2922 E9PJH7;Q9H936 SLC25A22 Mitochondrial glutamate carrier 1 yes no 0 0 0 3.5 0.5 1 1 52.374 52.415 2 8.7811E-33 15107 20230619_1883_Aki_TMTPro18x_K_F4 294.81 265.64 57664 48800 53057 65753 51140 56239 63839 63632 72187 68235 62059 60107 74937 62184 60290 78403 72682 70855 53297 44809 54333 64869 53623 57755 63883 64634 72682 68476 64692 61491 75383 64941 62347 78052 69409 67385 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 93927000 11411 2922 10796 21769;21770 17473;17474 17474 2 9606 Homo sapiens -0.06627196306612859 GVNIGGAGSYIYEK Unmodified 1426.7092 0.70924429 3639 Q53FN1;P52943;H0YFA4;P52943-2 CRIP2 Cysteine-rich protein 2 yes no 0 0 0 5.33 3.09 1 1 1 54.55 54.593 3 1.1759E-10 15516 20230619_1888_Aki_TMTPro18x_K_F8 134.06 126.69 310710 294570 286380 319650 287070 323790 359620 379720 458810 546910 537320 568660 599850 463710 546510 634840 588830 624870 287400 269790 293200 320980 300310 328510 361510 388380 465360 544170 550530 572670 607360 491040 559500 634360 563230 593480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1080100000 11412 3639 10797 21771;21772;21773 17475;17476 17476 2 9606 Homo sapiens 0.012958040725152387 GVNLDPLGK Unmodified 911.50763 0.50763136 3589 P46087;P46087-4;P46087-2;P46087-3;F5GYR3 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 7 0 1 54.56 54.623 3 0.045313 15607 20230619_1887_Aki_TMTPro18x_K_F7 49.06 31.624 69131 62155 58054 71960 77426 82934 77106 81068 85611 92486 90497 87784 101630 79701 80450 111010 87994 93700 63878 56971 60271 72005 78893 83006 78026 83226 87002 92699 93070 89107 102320 84146 82770 109990 84158 89159 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48556000 11413 3589 10798 21774 17477 17477 1 9606 Homo sapiens 0.04833784897471105 GVNLPGAAVDLPAVSEK Unmodified 1635.8832 0.88318591 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;Q504U3;A0A024R609;H3BQ34;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 6.8 0.748 2 2 1 60.118 60.168 3;4 1.5656E-14 17891 20230619_1887_Aki_TMTPro18x_K_F7 169.02 151.65 184450 109410 165660 157910 174160 190930 173630 158120 211590 177790 180610 203740 200360 159830 164830 210520 197380 212860 170120 100700 169910 155880 180320 189770 176260 164380 212140 179510 187750 204120 202150 169030 170290 210730 188640 202100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5843999999.999999 11414 370;3451 10799 21775;21776;21777;21778;21779 17478;17479;17480 17478 3 9606 Homo sapiens 0.09067964777977977 GVNSFQMFMTYK Oxidation (M) 1467.6527 0.65265739 4008 Q53SW3;Q9BPU6;E7EWB4;E9PHT0;E7ESV0 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 1 0 4 0 1 61.182 61.185 3 0.021912 18791 20230619_1883_Aki_TMTPro18x_K_F4 53.448 40.247 43699 35207 37518 40512 33934 36625 38533 33541 42190 30742 28932 30472 32406 21427 39000 31441 29866 26762 40356 32282 38586 40434 35666 37275 38692 34440 42220 31229 30495 30638 33231 22951 38994 31198 28642 25480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31784000 11415 4008 10800 21780 17481 17481 2645 1 9606 Homo sapiens -0.062462830800313895 GVNTDSGSVCR Unmodified 1150.5037 0.50368497 1198 J3K000;P12955;A0A8V8TLL9;A0A8V8TLP4;A0A140VJR2;A0A494C165;P12955-2;P12955-3;K7ES25;A0A8V8TLR1;A0A494C194;A0A8V8TN48;A0A8V8TNF2;A0A8V8TLN7;A0A8V8TLR6;V9GYE4 PEPD Xaa-Pro dipeptidase yes no 0 0 0 3.5 0.5 1 1 31.448 31.521 2 7.8911E-09 6119 20230619_1883_Aki_TMTPro18x_K_F4 185.77 152.65 16836 7519.3 16970 20470 26491 39850 21227 23340 33485 21760 40799 52401 30278 39334 37329 14953 48984 51517 15524 7003.9 17405 19811 26732 38386 22090 24943 33632 23044 41139 51278 31671 39686 38349 17543 46772 48534 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21734000 11416 1198 10801 21781;21782 17482;17483 17483 2 9606 Homo sapiens -0.06554672658558047 GVNTFSPEGR Unmodified 1062.5094 0.50942227 1160 A0A109NGN6;P28066;Q5U0A0 PSMA5 Proteasome subunit alpha type-5;Proteasome subunit alpha type yes no 0 0 0 5 1 1 1 40.094 40.162 2 0.00075807 9624 20230619_1883_Aki_TMTPro18x_K_F4 117.7 99.834 97116 85988 94881 102460 125060 147700 117550 113610 294270 108520 124220 129390 134660 106910 114290 131350 142150 122350 89829 78842 97087 102690 127770 145110 124180 118280 282350 111070 135840 129680 136200 112320 118200 131060 135600 116380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 101880000 11417 1160 10802 21783;21784 17484;17485 17484 2 9606 Homo sapiens -0.019332060845727028 GVNTGAVGSYIYDRDPEGK Unmodified 1996.949 0.94903365 3639 Q53FN1;P52943;H0YFA4;P52943-2;H0YHD8 CRIP2 Cysteine-rich protein 2 yes no 0 0 1 5.5 0.5 1 1 49.626 49.703 3 3.3846E-10 13837 20230619_1886_Aki_TMTPro18x_K_F6 130.46 115.54 72372 57814 73314 70426 68435 76888 78104 80139 90959 109430 119100 112450 124420 104000 106680 117850 112360 121890 66918 53041 74308 70200 71748 77340 78634 82407 93125 109080 121040 113750 125940 108310 109170 118410 107520 115690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 640150000 11418 3639 10803 21785;21786 17486 17486 1 9606 Homo sapiens -0.009562908378029533 GVNTGGREPNTMVEK Unmodified 1587.7675 0.76750423 4038 Q5JRA6-2;Q5JRA6;A0A0A0MRH6 MIA3 Melanoma inhibitory activity protein 3 yes no 0 0 1 6 0 1 38.558 38.64 3 0.024823 8980 20230619_1886_Aki_TMTPro18x_K_F6 57.414 36.181 17416 17521 19596 20684 25043 26492 23270 22794 26608 23484 25405 28264 24740 18628 24649 29452 32617 26201 16144 16057 19813 20704 25521 26269 23668 23561 26866 23843 26116 28151 25262 20106 25530 29225 31086 24944 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7354100 11419 4038 10804 21787 17487 17487 1 9606 Homo sapiens -0.002868823445396629 GVPAFFR Unmodified 792.42826 0.42825883 2350 B3KMC9;Q9H0D6;A2RRQ1 XRN2 5'-3' exoribonuclease 2 yes no 0 0 0 4 0 1 52.663 52.687 2 0.010769 15205 20230619_1883_Aki_TMTPro18x_K_F4 117.54 90.418 267760 213310 230390 249560 219300 264380 257780 266990 299490 262030 248950 226490 281640 215080 244890 296920 277460 263540 247260 195630 237120 249300 230010 266250 259000 272410 300700 264070 259070 231360 284540 226680 251750 295030 265060 250720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102750000 11420 2350 10805 21788 17488 17488 1 9606 Homo sapiens 0.023741827340018062 GVPAGNSDTEGGQPGR Unmodified 1497.6808 0.68079771 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3;Q69YJ6;G3V3B0;Q9UKV3-3;Q9UKV3-2 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 0 2 0 1 32.667 32.727 2 2.7616E-14 6788 20230619_1881_Aki_TMTPro18x_K_F2 186.17 148.98 6436 3394.8 8727.4 8048.7 11467 17052 8971.7 9718.7 9336.4 6990.6 11599 13033 11042 9500.8 13615 5515.8 11930 12915 5955.5 3150 8717.1 7848.1 11655 16367 9208.8 10358 9569.5 7402.8 11786 12826 11406 9712.8 13661 6048 11438 12185 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8516200 11421 2896 10806 21789 17489 17489 1 9606 Homo sapiens -0.04813545574734235 GVPAGNSDTEGGQPGRK Unmodified 1625.7758 0.77576073 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3;Q69YJ6;G3V3B0;Q9UKV3-3;Q9UKV3-2 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 1 4.5 0.5 1 1 33.354 33.423 3 3.3028E-06 6922 20230619_1885_Aki_TMTPro18x_K_F5 105.2 82.4 30359 12324 45516 45127 66383 88796 47849 67137 54243 35786 64788 79428 63833 60568 50460 25403 76596 69153 28100 11573 45303 43358 66896 85840 49586 69174 55237 39197 66015 77926 64597 61243 52837 28640 72982 65245 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79023000 11422 2896 10807 21790;21791 17490 17490 1 9606 Homo sapiens -0.01209612103548352 GVPGAIVNVSSQCSQR Unmodified 1657.8206 0.82060243 1484 A0A384NY14;Q7Z4W1;J3KS22;J3QS36;J3KRZ4;J3QS45;J3KSZ5;J3QL34 DCXR L-xylulose reductase yes no 0 0 0 2 0 1 46.263 46.342 2 3.0201999999999996E-28 12748 20230619_1881_Aki_TMTPro18x_K_F2 212.9 183.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11423 1484 10808 21792 17491 17491 1 9606 Homo sapiens 0.01800495438146754 GVPGHAVVDHRPR Unmodified 1395.7484 0.74836419 876 A0A087X0H9;Q5T8P6-5;Q5T8P6-4;Q5T8P6-3;Q5T8P6-2;Q5T8P6;E2PSN0;B4DZH7 RBM26 RNA-binding protein 26 yes no 0 0 1 8 0 1 27.301 27.331 4 7.4687E-05 4739 20230619_1888_Aki_TMTPro18x_K_F8 99.589 88.354 13147 9633.6 13647 14184 19943 17080 16324 17947 21832 8705.4 9964.4 12586 8220.6 9107 11393 6659.6 11998 8881.4 12153 8859.6 13913 13986 20088 17076 16832 18024 21417 9431.1 10730 12472 8618.1 9369 11535 6874.8 11452 8423.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4025500 11424 876 10809 21793 17492 17492 1 9606 Homo sapiens 0.0663199393738978 GVPPPPTVR Unmodified 918.5287 0.52870115 3807 Q07666;B4DDX2;B2R7B5;Q07666-2;B4E043;Q07666-3 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 0 0 0 7.5 0.5 1 1 38.997 39.023 2 0.0032915 9031 20230619_1888_Aki_TMTPro18x_K_F8 98.458 49.703 61531 38749 56816 60416 76981 77991 72252 78374 88712 65142 66866 66452 70692 60866 60255 59848 74240 67839 56778 35686 58428 59439 78216 77518 73620 79647 88523 66624 69788 67207 71558 62929 62218 60618 70853 64373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105800000 11425 3807 10810 21794;21795 17493 17493 1 9606 Homo sapiens 0.0661779499697559 GVPQQIEVAR Unmodified 1095.6037 0.60365701 507 A0A024R8A7;Q96I24 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 0 0 0 5.5 0.5 1 1 42.18 42.268 2 0.00035669 10451 20230619_1886_Aki_TMTPro18x_K_F6 129.83 78.924 157070 119810 161120 167260 193180 207550 183140 191380 228500 191350 223030 229150 218450 185500 221190 205680 235070 226590 145210 110100 163850 165500 197860 206410 186670 196600 229880 194600 228950 229420 223230 193860 225540 207600 224720 215030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 302070000 11426 507 10811 21796;21797 17494 17494 1 9606 Homo sapiens 0.059679327375761204 GVPTGFILPIR Unmodified 1168.6968 0.69682911 2973 V9GYY3;F5H2F4;P11586;V9GZ78;B7Z809;A0A8V8TL50;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 5 0.816 1 1 1 61.898 61.933 2 7.4288E-06 18971 20230619_1886_Aki_TMTPro18x_K_F6 153.24 107.85 1064500 916670 950540 889440 852660 970470 933340 931770 980430 1113100 1215000 1178900 1177200 1004100 1220600 1198100 1129300 1264300 983790 839060 973150 902430 896060 974900 938510 959440 1006000 1116900 1233900 1188000 1204500 1051800 1235400 1204700 1082400 1199700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1231500000 11427 2973 10812 21798;21799;21800 17495;17496 17496 2 9606 Homo sapiens 0.1192285719080246 GVPVISVK Unmodified 797.50109 0.50108942 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959 SAFB Scaffold attachment factor B1 yes no 0 0 0 2.5 0.5 1 1 51.157 51.215 2 0.0018648 14962 20230619_1881_Aki_TMTPro18x_K_F2 135.84 97.604 425170 361110 417630 416660 459240 509790 476810 446830 538990 512990 570440 520860 556210 456860 500020 593140 585820 570430 393180 331050 425500 417530 474270 507070 481670 462630 546750 515260 582790 526590 565400 480630 514690 592320 559570 542090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 655560000 11428 2020 10813 21801;21802 17497;17498 17497 2 9606 Homo sapiens 0.09423891736753376 GVPWNFTFNVK Unmodified 1307.6663 0.66625727 3431 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;P11171-5;Q4VB87;A0A994J847;Q29RX4;A0A2R8YCW8;A0A3B3ITP0;P11171-7;A0A2R8Y5Z6;A0A2R8Y7Y3;A0A2R8Y5G2;P11171-6;A0A2R8Y570;A0A2R8Y420;A0A3B3IU06;A0A2R8YFR9;A0A2R8Y6G5;A0A3B3IUD6;A0A2R8Y7N0;A0A2R8Y6D0;A0A3B3ITC5;A0A2R8Y6T6 EPB41 Protein 4.1 yes no 0 0 0 5 0 1 63.022 63.069 3 0.014796 19367 20230619_1885_Aki_TMTPro18x_K_F5 64.439 53.226 60859 55470 66235 62319 48293 66148 65994 68346 68869 66444 60079 58251 60263 56533 66908 70907 67630 63350 56356 50827 66561 62462 52134 66629 65636 69608 69652 67002 62080 59472 61860 59106 67981 70595 64671 60266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57124000 11429 3431 10814 21803 17499 17499 1 9606 Homo sapiens 0.02473078805746809 GVQLQTHPNVDK Unmodified 1334.6943 0.69426293 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 0 6.5 0.5 1 1 39.89 39.966 3 2.7896E-07 9236 20230619_1887_Aki_TMTPro18x_K_F7 159.66 131.33 337330 282390 328580 339310 422230 449240 401000 383250 484730 476310 528170 530220 550680 482040 436100 701820 722140 683750 311890 258990 335980 339420 430590 444500 408100 398540 490880 478170 540700 534660 556320 510330 462710 699810 687910 649760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 471290000 11430 2181 10815 21804;21805 17500 17500 1 9606 Homo sapiens 0.040303569951674945 GVQTLVIGR Unmodified 941.56581 0.56581494 2940 E9PNP3;Q9H7C9;E9PR47;E9PJP1;E9PLK9;K4DI89;Q9H7C9-3;Q9H7C9-2 AAMDC Mth938 domain-containing protein yes no 0 0 0 2.5 0.5 1 1 47.32 47.397 2 0.003641 12963 20230619_1882_Aki_TMTPro18x_K_F3 96.668 45.609 605900 481100 609730 606590 595560 754110 659280 669700 778580 609960 666200 639250 720200 622780 630620 729510 815090 801340 560190 441540 618960 604210 622330 749090 664830 688330 781420 621000 690960 647510 729400 648700 653530 735080 777990 760410 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 308020000 11431 2940 10816 21806;21807 17501 17501 1 9606 Homo sapiens 0.0926946654275298 GVQVETISPGDGR Unmodified 1313.6575 0.65754307 3736 P62942;A0A087WZM5;A0A7I2V3S6;Q1JUQ3;Q5W0X3;A0A087WTS4;A0A087WV48 FKBP1A;FKBP12-Exin Peptidyl-prolyl cis-trans isomerase FKBP1A;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 3.5 0.5 1 1 42.892 42.947 2 2.4967E-10 10782 20230619_1883_Aki_TMTPro18x_K_F4 206.1 152.6 219680 174900 191200 198520 236980 264100 262470 263300 289360 282570 304780 313140 318070 270250 266690 331540 331750 321100 202880 160360 197370 199470 243300 262080 263960 269460 293880 285460 312580 315110 321810 283390 276030 331420 316710 305130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1094500000 11432 3736 10817 21808;21809 17502;17503 17503 2 9606 Homo sapiens 0.013260603786193315 GVQYLNEIK Unmodified 1062.571 0.5709599 3447 P13639;Q8TA90;B4DPU3;Q6W6M8 EEF2 Elongation factor 2 yes no 0 0 0 6.5 1.12 1 1 1 1 52.955 53.029 2;3 2.8708E-06 14884 20230619_1887_Aki_TMTPro18x_K_F7 146.27 116.5 1148800 931970 1086100 1064400 954570 1202100 1113000 1135900 1231900 1363300 1220700 1165000 1439800 1170900 1132100 1558900 1365600 1200200 1061700 854450 1106600 1066200 1007600 1203500 1117200 1170800 1249100 1359600 1262000 1192500 1447700 1228000 1171800 1539100 1303200 1144400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4010599999.9999995 11433 3447 10818 21810;21811;21812;21813 17504;17505;17506;17507 17505 4 9606 Homo sapiens 0.042177256146942455 GVSAIVYMVDAADQEK Unmodified 1694.8185 0.81853675 559 A0A024R977;Q96BM9;B2R7U5;A0A087X2J2 ARL8A ADP-ribosylation factor-like protein 8A yes no 0 0 0 5.5 1.12 1 1 1 1 63.932 63.964 3 8.1166E-09 19731 20230619_1885_Aki_TMTPro18x_K_F5 142.1 124.82 94166 78146 89629 89200 76244 85802 87133 84479 91785 87971 97441 101280 102190 95327 97400 107580 110090 119230 87046 71639 91214 89168 80565 87015 87414 86530 93458 89135 99958 102030 103990 99151 99886 108540 105270 113080 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 457180000 11434 559 10819 21814;21815;21816;21817 17508;17509;17510 17509 3 9606 Homo sapiens -0.0010797809034102102 GVSEAAVLKPSEELPAEATSSVEPEK Unmodified 2653.3334 0.33342155 3342 Q0P607;O95104-2;O95104-3;O95104 SFRS15;SCAF4 Splicing factor, arginine/serine-rich 15 yes no 0 0 1 4 0 1 55.653 55.661 4 2.2668E-08 16496 20230619_1883_Aki_TMTPro18x_K_F4 104.33 89.397 57247 46656 51535 57004 49734 60450 60722 50211 61348 63910 65828 58749 69416 57983 66262 63681 66954 62556 52890 42803 52842 56753 52141 60626 60594 52410 62658 63716 67450 59865 70568 60150 67456 63857 64024 59444 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 126820000 11435 3342 10820 21818 17511;17512 17511 2 9606 Homo sapiens 0.07288817888593258 GVSGDRDENSFSLNSSISSSAR Unmodified 2271.0363 0.036345105 275;1599 A0A024R3Z1;A0A024R3Y8;P11137-4;A0A669KB77;P11137-3;P11137;A8K5Y1;A0A024R409;Q59FX9;P11137-2 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 1 5 0 1 44.053 44.132 3 1.3416999999999999E-80 11256 20230619_1885_Aki_TMTPro18x_K_F5 322.22 304.85 60354 48311 56730 63782 41299 51195 62649 62218 67463 86527 80935 84150 72472 62420 71338 106010 87891 104610 55772 44359 57751 62981 44738 52964 62105 63463 69058 86005 82060 84818 74205 67409 73679 105620 84049 99311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58590000 11436 275;1599 10821 21819 17513 17513 1 9606 Homo sapiens -0.048331614247672405 GVSGSCNIDVVCPEGDGR Unmodified 1876.8044 0.80436002 2782 CON__P15636 yes yes 0 0 0 2 0.816 1 1 1 46.253 46.306 3 1.0823999999999999E-19 12394 20230619_1882_Aki_TMTPro18x_K_F3 192.65 184.87 + 385590 287360 394530 404990 502640 507560 447000 469070 581040 507810 583180 605800 504040 512040 517220 515100 585160 629180 356410 264120 401650 400570 511860 504580 458140 482790 584180 514280 594940 607180 518190 531170 529470 524030 559530 596230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2296300000 11437 2782 10822 21820;21821;21822 17514;17515 17515 2 -0.09896998580938998 GVSGSCNIDVVCPEGDGRR Unmodified 2032.9055 0.90547105 2782 CON__P15636 yes yes 0 0 1 4.88 1.9 1 1 2 1 1 1 1 41.424 41.482 3 1.0394999999999999E-60 10113 20230619_1882_Aki_TMTPro18x_K_F3 306.11 277.9 + 527690 362540 506480 462350 754980 636710 654980 684520 799040 630640 773050 801040 596280 576420 703860 714560 729220 683870 487290 332970 519530 461220 760520 632130 670580 694250 804140 645480 786980 797910 619820 608730 715310 714190 697150 650030 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 42619000000 11438 2782 10823 21823;21824;21825;21826;21827;21828;21829;21830 17516;17517;17518;17519;17520;17521;17522;17523 17517 8 -0.06966546878243207 GVSINQFCK Unmodified 1051.5121 0.51206481 4721 Q9Y3B7;Q53G19;Q9Y3B7-2;Q9Y3B7-3;E9PQB6 MRPL11 39S ribosomal protein L11, mitochondrial yes no 0 0 0 2 0 1 49.815 49.874 2 1.0675E-05 14382 20230619_1881_Aki_TMTPro18x_K_F2 172.21 132.17 110420 88908 97605 94324 115410 134530 131700 119030 141860 86719 81809 58531 78904 60717 88593 87464 87063 65986 101990 81461 100490 95386 118990 132630 132060 121790 141380 88642 86520 60914 81072 64000 89819 86272 83170 62979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68927000 11439 4721 10824 21831 17524 17524 1 9606 Homo sapiens -0.011630739512838772 GVSLTNHHFYDESK Unmodified 1632.7532 0.75323437 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;K7EPW7;A0A7I2V2T6;K7EKX1;K7EJ70;K7EIP3 PRKCSH Glucosidase 2 subunit beta yes no 0 0 0 7.5 0.5 1 1 41.922 41.956 4 2.2482E-08 10278 20230619_1888_Aki_TMTPro18x_K_F8 146.59 127.68 90954 74841 88687 88204 130560 104880 94773 100330 115610 104040 113790 117770 123430 115440 99130 134250 121780 145200 84088 68632 90840 88222 131070 104810 98305 102890 116570 105410 117260 118900 124610 120120 102680 135110 116470 137710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98447000 11440 444 10825 21832;21833 17525;17526 17526 2 9606 Homo sapiens -0.037832115011724454 GVSPEPIHLK Unmodified 1075.6026 0.60259438 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A994J696;H0YI79;A0A994J6A0;A0A994J3G1;F8W1W3;A0A994J3F1;A0A994J409;B4DPZ9;O00429-2;O00429-8;O00429-4;O00429-9;D3DUW7;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 0 7 0.816 1 1 1 44.563 44.626 3 5.3669E-05 11146 20230619_1887_Aki_TMTPro18x_K_F7 119.53 103.3 276410 223130 243280 310610 303920 331190 322720 311220 372110 221350 251360 223560 236490 220550 232970 253560 244470 252710 255320 204990 251230 306580 311480 332790 325650 317030 370950 228910 262780 227030 241870 229270 237720 254190 233860 240010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 508880000 11441 3212;3213 10826 21834;21835;21836 17527 17527 1 9606 Homo sapiens 0.06781718368642942 GVSSESSGDREK Unmodified 1236.5582 0.55822296 3850 Q13435;E9PPJ0;E9PJ04;H0YCG1 SF3B2 Splicing factor 3B subunit 2 yes no 0 0 1 2 0 1 29.354 29.426 3 0.013867 5508 20230619_1881_Aki_TMTPro18x_K_F2 66.953 51.414 13864 5545.5 23293 27044 48610 41940 29005 50295 19673 11619 30163 36413 14406 20748 31161 8272.2 32976 26135 12851 5258.7 23265 25696 47817 41433 30158 49699 20947 14525 29840 35296 16055 21223 31360 9593 31487 24659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9785100 11442 3850 10827 21837 17528 17528 1 9606 Homo sapiens -0.050593823061490184 GVSTLCEEHVEPETTLPAR Unmodified 2124.0157 0.015733004 3956 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 yes yes 0 0 0 2.5 0.5 1 1 45.48 45.559 3 8.7242E-15 12100 20230619_1882_Aki_TMTPro18x_K_F3 159.8 146.97 72789 52348 62995 70146 72555 96766 75326 70347 112410 75628 71913 78486 86494 78720 67675 95832 97277 96874 67180 48094 65016 69681 74912 95163 76879 73841 110720 76368 76344 79572 87014 82080 70935 95998 92785 92002 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81028000 11443 3956 10828 21838;21839 17529;17530 17530 2 9606 Homo sapiens -0.0013142333823452645 GVTCLSFSK Unmodified 997.49027 0.49026674 1896 A0MNN4;Q2TAY7;Q2TAY7-2 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes no 0 0 0 2.33 0.471 2 1 51.876 51.928 2 7.6987E-05 14999 20230619_1882_Aki_TMTPro18x_K_F3 159.37 100.77 143580 138320 134850 145630 155960 186720 172060 167830 193490 77698 67376 52509 60262 51234 106220 71524 76166 53509 132840 126650 138130 147060 160910 185250 173100 170350 190520 82813 74769 54545 63960 53962 105340 70659 73009 51097 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86863000 11444 1896 10829 21840;21841;21842 17531;17532 17532 2 9606 Homo sapiens -0.008578786998327814 GVTECYECHPK Unmodified 1378.5646 0.56457067 1535 B3KMZ6;B2RDF5;A0A3R5W301;Q9UBT2;Q9UBT2-2;K7EPL2;B7Z5X0 UBA2 SUMO-activating enzyme subunit 2 yes no 0 0 0 3.5 0.5 1 1 36.845 36.894 3 0.00069284 8303 20230619_1883_Aki_TMTPro18x_K_F4 93.839 82.399 35693 30308 33732 42369 44016 54382 43110 45958 60693 53317 61230 73920 70969 63229 50526 89071 95270 110490 32997 27840 34646 41922 44964 53858 44058 47726 60842 54142 63277 73769 71231 66952 54424 90147 90827 104670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31297000 11445 1535 10830 21843;21844 17533;17534 17534 2 9606 Homo sapiens -0.10956903670626161 GVTECYECHPKPTQR Unmodified 1860.8247 0.82470153 1535 B3KMZ6;B2RDF5;A0A3R5W301;Q9UBT2;Q9UBT2-2;K7EPL2;B7Z5X0 UBA2 SUMO-activating enzyme subunit 2 yes no 0 0 1 6 0.816 1 1 1 34.476 34.546 4 9.5558E-25 7426 20230619_1886_Aki_TMTPro18x_K_F6 220.76 185.85 112890 84107 106850 112070 109260 125580 122520 113680 124810 136860 147090 142140 155580 115460 121340 155080 173090 150480 104280 77256 109130 111040 113690 125670 122850 117610 127960 137210 150170 143200 156810 122140 127020 154840 164960 143060 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 468580000 11446 1535 10831 21845;21846;21847 17535;17536;17537 17536 3 9606 Homo sapiens -0.0712778313045419 GVTFLFPIQAK Unmodified 1219.6965 0.69649476 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 5.5 0.5 1 1 63.282 63.329 3 5.1927E-09 19430 20230619_1885_Aki_TMTPro18x_K_F5 174.41 135.15 894710 788820 870680 930110 756900 959240 945430 934860 1043100 797780 663200 572100 760440 580070 857690 854840 689330 622820 827530 723200 885290 928240 801300 966990 945300 953150 1041600 807240 702430 592060 777220 612800 861120 841710 660710 594260 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1651399999.9999998 11447 1748 10832 21848;21849 17538;17539;17540;17541 17540 4 9606 Homo sapiens 0.09543437470938443 GVTFNVTTVDTK Unmodified 1280.6612 0.66123147 1305 A0A1U9X8Y4;Q5SRT3;Q53FB0;O00299 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 yes no 0 0 0 7.5 0.5 1 1 53.464 53.534 3 5.5953E-07 15144 20230619_1887_Aki_TMTPro18x_K_F7 149.23 128.84 308500 230140 270340 315670 320990 337490 395340 381040 403070 365110 357890 329530 402440 334060 288550 423560 409250 409760 284820 211470 278900 312010 331260 340570 394370 385800 408360 368800 370980 336590 404000 349260 302830 423000 390400 389340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1651199999.9999998 11448 1305 10833 21850;21851 17542;17543 17542 2 9606 Homo sapiens 0.03212730152449694 GVTIASGGVLPNIHPELLAK Unmodified 1985.131 0.13096118 3298 O75367;O75367-3;O75367-1;A0A8I5KRC6;A0A8I5KS04;A0A994J4J7;D6RCF2 H2AFY Core histone macro-H2A.1;Histone H2A yes no 0 0 0 3 0 1 61.117 61.146 3 2.021E-23 18896 20230619_1882_Aki_TMTPro18x_K_F3 192.7 174.34 92791 83235 84271 91458 74459 72912 99198 102630 86516 85861 80192 89703 100820 89587 84108 100600 95337 110450 85787 76257 86206 91515 78671 75871 98221 102360 88641 87745 83560 90895 101490 93001 86535 101420 91214 104740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 247970000 11449 3298 10834 21852 17544 17544 1 9606 Homo sapiens 0.1778009364581976 GVTIASGGVLPR Unmodified 1125.6506 0.6506072 55 Q9P0M6;A0A024QZP6;A0A7I2V423;A0A7I2V412;Q9HA11;A0A7I2YQD6;A0A7I2YQR8;A0A7I2V6E9;A0A7I2V2N7;A0A7I2V522;A0A7I2V3Z8;A0A7I2V3M7;A0A7I2V3R0 H2AFY2 Core histone macro-H2A.2;Core histone macro-H2A;Histone H2A yes no 0 0 0 2.5 0.5 1 1 48.689 48.761 2 3.2081E-07 13559 20230619_1882_Aki_TMTPro18x_K_F3 166.66 124.19 571680 490690 533710 610400 671300 762420 777780 705670 794240 628350 673440 634560 683570 572420 742270 701770 694510 657180 528490 450150 548050 608470 689320 757990 778080 722870 802850 639710 697130 642210 700060 599340 750880 700840 664710 624800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 585260000 11450 55 10835 21853;21854 17545 17545 1 9606 Homo sapiens 0.09280792288700468 GVTIIGPATVGGIK Unmodified 1281.7656 0.76563696 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 3.5 0.5 1 1 58.259 58.275 2;3 1.6380999999999998E-19 17711 20230619_1882_Aki_TMTPro18x_K_F3 193 153.29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11451 161 10836 21855;21856 17546;17547 17546 2 9606 Homo sapiens 0.13602476699838917 GVTIIGPATVGGIKPGCFK Unmodified 1871.0339 0.033889671 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 1 6 0 2 70.944 71.018 3;4 3.304E-15 17772 20230619_1886_Aki_TMTPro18x_K_F6 167.14 150.25 387870 362590 393820 382600 272390 311260 344880 333340 300100 470700 458770 356460 430790 315600 423860 381530 340550 287980 359010 332030 397630 384110 294380 320900 342570 342790 315230 464470 461380 365780 439620 330580 426290 377340 326280 274710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 175790000 11452 161 10837 21857;21858 17548;17549;17550 17549 3 9606 Homo sapiens 0.13321408165120374 GVTIKPTVDDD Unmodified 1158.5768 0.57683314 3571 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 1 3.5 0.5 1 1 47.575 47.635 2 0.0028906 13098 20230619_1882_Aki_TMTPro18x_K_F3 97.431 76.058 288010 213740 252430 268650 264600 301290 329140 263520 340460 370810 397990 437260 412240 314270 337470 446970 411310 422660 265890 196210 259730 267200 275710 301320 328340 274920 348600 370950 406460 436620 416520 335310 349170 445330 392910 401660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 194470000 11453 3571 10838 21859;21860 17551 17551 1 9606 Homo sapiens 0.0038877933573076007 GVTIPYRPK Unmodified 1029.5971 0.59711507 3930 Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DRD7;B4DLC0;H3BSS4;F8VRH0 PCBP2 Poly(rC)-binding protein 2 yes no 0 0 1 5 0.816 1 1 1 43.576 43.648 3 0.00030419 11091 20230619_1883_Aki_TMTPro18x_K_F4 123.16 84.008 759420 564570 652950 738290 699710 881280 767590 823950 1016900 953940 994940 984450 1242400 1016900 764810 1256000 1154900 1082500 701000 518490 673510 733010 726480 878590 777810 848900 1021100 958460 1031900 999790 1237600 1060500 810320 1247200 1100700 1030200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3164699999.9999995 11454 3930 10839 21861;21862;21863 17552;17553;17554 17552 3 9606 Homo sapiens 0.08350039576839663 GVTIQPLK Unmodified 854.52255 0.52255314 2887 E5RIZ4;Q9P015;B2R739;E5RHF4 MRPL15 39S ribosomal protein L15, mitochondrial yes no 0 0 0 2 0 1 49.339 49.398 3 0.030905 14163 20230619_1881_Aki_TMTPro18x_K_F2 65.252 31.456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11455 2887 10840 21864 17555 17555 1 9606 Homo sapiens 0.0894727676546836 GVTLGFR Unmodified 748.42317 0.42317345 3540 Q53Z07;P32969;D6RAN4;A0A2R8Y5Y7;H0Y9V9;B4E1M5;B4DLV8;Q2NKY6 RPL9 60S ribosomal protein L9 yes no 0 0 0 2.5 1.12 1 1 1 1 47.066 47.115 2 0.0025846 13087 20230619_1881_Aki_TMTPro18x_K_F2 160.77 64.817 1248900 1065800 1063200 1096500 1229300 1443700 1263800 1308400 1482200 573740 492210 390020 445670 372420 797000 561760 557190 298530 1153700 976090 1098300 1109900 1266100 1430400 1278400 1326000 1455400 615330 549730 404840 473350 394520 789630 547620 533640 287280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1375800000 11456 3540 10841 21865;21866;21867;21868 17556;17557 17556 2 9606 Homo sapiens 0.038898788713822796 GVTNQTGLK Unmodified 916.49779 0.49779495 4718 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 yes yes 0 0 0 8 0 1 39.995 39.984 2 3.5822E-05 9468 20230619_1888_Aki_TMTPro18x_K_F8 166.07 58.748 31126 17401 33979 36329 53195 62254 41464 51348 51259 25125 39184 35047 30120 30042 49178 18680 44805 37606 28746 16103 34587 35424 53455 60671 42801 52463 51084 27148 40383 34975 31967 30558 49255 20115 42861 35545 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13309000 11457 4718 10842 21869 17558 17558 1 9606 Homo sapiens 0.03620596892085359 GVTQFGNK Unmodified 849.43447 0.43446642 416 B2R6U8;A0A024R6W2;O43809;Q5HYH5 NUDT21;DKFZp313O211 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 0 1.33 0.471 2 1 42.729 42.757 2;3 0.0003582 11295 20230619_1880_Aki_TMTPro18x_K_F1 145.34 100.01 159310 110970 160100 166350 208560 222210 190330 187440 235810 148100 185680 159590 175160 137150 172440 126940 204890 148210 147180 102100 163330 164090 212310 219590 194320 192830 235350 152330 192240 160810 178940 141760 176900 129100 195330 140750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 362450000 11458 416 10843 21870;21871;21872 17559;17560 17559 2 9606 Homo sapiens 0.003726561748635504 GVTQIDNDLK Unmodified 1101.5666 0.5666028 575 A0A024R9I0;P21283;E7EV59;B7Z593 ATP6V1C1 V-type proton ATPase subunit C 1 yes no 0 0 0 4 0 1 48.392 48.432 2 4.1131E-12 13244 20230619_1883_Aki_TMTPro18x_K_F4 208.11 94.854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11459 575 10844 21873 17561 17561 1 9606 Homo sapiens 0.019882164011050918 GVTQYYAYVTER Unmodified 1448.6936 0.69359423 2256 P26196;B2R858 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 0 7.5 0.5 1 1 53.898 53.967 2 1.839E-05 15214 20230619_1888_Aki_TMTPro18x_K_F8 140.63 121.88 162700 140880 162460 170860 138110 171380 161710 167130 169410 208460 198090 182720 213160 178450 184970 225690 198940 206670 150500 129210 164750 170120 146150 173140 162040 172130 173500 207610 202440 186590 215700 186740 189580 224860 190260 196470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 582180000 11460 2256 10845 21874;21875 17562 17562 1 9606 Homo sapiens -0.01280482444531117 GVTSILPVLR Unmodified 1053.6546 0.65462995 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 5 0 1 60.233 60.285 2 2.6492E-07 18012 20230619_1885_Aki_TMTPro18x_K_F5 152.89 123.08 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11461 2863 10846 21876 17563 17563 1 9606 Homo sapiens 0.12994881782401535 GVTYLFPIQVK Unmodified 1263.7227 0.72270951 2610 B4DW97;Q9BQ39;B4DED6;Q53FI9 DDX50 ATP-dependent RNA helicase DDX50 yes no 0 0 0 5 0 1 62.929 62.976 3 0.00022123 19276 20230619_1885_Aki_TMTPro18x_K_F5 109.42 86.348 190310 153710 188050 184470 165620 223100 200430 191290 225700 142290 128620 108740 135780 101400 162580 136450 137550 120240 175950 140990 190910 184290 175080 221820 200810 196330 224390 145590 136800 111790 139550 106770 163310 135740 131730 114440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142310000 11462 2610 10847 21877 17564 17564 1 9606 Homo sapiens 0.1013970664239423 GVVCIDEFDK Unmodified 1180.5434 0.54342452 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 4.5 0.5 1 1 56.11 56.146 3 0.0004788 16697 20230619_1883_Aki_TMTPro18x_K_F4 103.26 71.824 143000 108910 132530 135040 124940 141060 143740 136750 154820 176530 169530 161050 189750 147380 145600 193680 171410 188170 132090 99953 135410 134330 130930 142090 144220 141080 157820 175770 174030 163780 190830 155010 150530 193420 163870 178720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 439920000 11463 1104 10848 21878;21879 17565 17565 1 9606 Homo sapiens -0.0396254570785004 GVVDSDDLPLNVSR Unmodified 1484.7471 0.74708636 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;A0A7P0TBC2 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 4.33 1.25 1 1 1 53.344 53.38 2 6.6013E-37 15614 20230619_1882_Aki_TMTPro18x_K_F3 285.32 212.53 384420 315940 350960 386190 378600 417990 451820 448370 458440 457710 466660 518640 505210 452150 481160 559670 479170 572860 355220 289830 359990 384720 393010 420950 451500 456210 467090 463840 480540 521500 513380 474160 490070 561200 459140 543620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1152200000 11464 3452 10849 21880;21881;21882 17566;17567;17568 17566 3 9606 Homo sapiens 0.024102702673189924 GVVDSEDLPLNISR Unmodified 1512.7784 0.77838649 751;3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7;A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 EL52;HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 4 1.41 2 2 2 2 2 55.947 55.988 2;3 1.0037E-46 16747 20230619_1882_Aki_TMTPro18x_K_F3 311.88 0 1453100 1246000 1322000 1529200 1195100 1536800 1391300 1460900 1608600 2419400 1136600 1392400 1158200 2209700 864520 2778200 858280 2067500 1343100 1143000 1353300 1521000 1258900 1551500 1398400 1522500 1613700 2362400 1190800 1487200 1176200 2276700 895390 2737100 829630 1966800 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 100630000000 11465 3177;751 10850 21883;21884;21885;21886;21887;21888;21889;21890;21891;21892 17569;17570;17571;17572;17573 17570 5 9606 Homo sapiens 0.04250843301429086 GVVEVTHDLQK Unmodified 1223.651 0.65100113 346 P50454;A0A024R5K8;A8K259;B4DN87;E9PJH8;E9PKH2 SERPINH1 Serpin H1 yes no 0 0 0 5 0.816 1 1 1 45.491 45.56 3 2.5162E-12 11958 20230619_1883_Aki_TMTPro18x_K_F4 196.76 141.09 234780 190190 206160 264600 280160 329090 758760 704630 864650 328250 381040 483510 392050 315540 429940 443410 443250 490510 216860 174720 213890 262250 298010 336070 739090 683600 853100 357050 415100 478260 401760 337790 437350 446090 424300 465220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 673170000 11466 346 10851 21893;21894;21895 17574;17575 17574 2 9606 Homo sapiens 0.04812167217892238 GVVFDVTSGK Unmodified 1007.5288 0.52876073 4687 Q9UMX5 NENF Neudesin yes yes 0 0 0 7.5 0.5 1 1 53.706 53.775 2 2.7441E-05 15159 20230619_1888_Aki_TMTPro18x_K_F8 156.62 112.81 225840 180470 193540 223400 188250 203140 195870 202240 229050 214850 227330 232330 228370 199450 231600 241070 259030 244570 208550 165600 199350 221810 196250 206970 198160 207080 231380 217000 233440 233970 233270 208990 237010 241770 247470 232310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 354090000 11467 4687 10852 21896;21897 17576;17577 17577 2 9606 Homo sapiens 0.025297502063381216 GVVHVYTR Unmodified 929.5083 0.50830006 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;Q01433-5;Q01433-3;Q01433-4;A0A7P0Z4H6;H0YF16;A0A804H2H4;A0A590UJX5;A0A590UK85;A0A7P0TB79 AMPD2 AMP deaminase 2 yes no 0 0 0 1.5 0.5 1 1 33.053 33.082 3 4.7873E-05 6926 20230619_1881_Aki_TMTPro18x_K_F2 170.66 119.32 30511 27581 31072 34730 34383 39282 42655 41349 45975 29096 36981 33938 29558 27044 37717 33981 36035 34974 28235 25301 31600 34546 35676 39414 42614 41777 46209 30230 38039 34033 30807 28480 38096 34105 34487 33212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164130000 11468 1570 10853 21898;21899 17578 17578 1 9606 Homo sapiens 0.04072624337186426 GVVPFQAGSR Unmodified 1016.5403 0.54032847 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;A0A7P0T8C6;Q05DV5;H7C5K1;Q7Z2W4-4;Q7Z2W4-5 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 0 1.5 0.5 1 1 44.352 44.393 2 0.0040028 11851 20230619_1881_Aki_TMTPro18x_K_F2 112.8 87.664 147550 127660 135940 140240 144970 163270 157310 153810 171910 149530 153090 132100 148770 116600 145100 161550 155140 130830 136400 116980 139230 140950 150260 163170 158350 157660 173500 150860 157640 134500 151750 123180 148250 159860 148170 124680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86764000 11469 2740 10854 21900;21901 17579 17579 1 9606 Homo sapiens 0.03271992020336256 GVVPGGGLK Unmodified 782.46504 0.46503826 355 A0A024R5S5;O75822;O75822-3;O75822-2;H0YLP3 EIF3S1;EIF3J Eukaryotic translation initiation factor 3 subunit J yes no 0 0 0 1.5 0.5 1 1 45.485 45.526 2 0.00059395 12505 20230619_1880_Aki_TMTPro18x_K_F1 134.44 85.079 811020 657750 718290 777500 750520 844170 779730 754640 975630 968260 1104800 1090400 1046900 904180 919620 1166600 1246200 1073900 749170 603240 738190 776260 778480 846660 790720 783040 987850 970940 1124600 1095400 1064700 952370 956700 1162300 1188000 1021600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 473360000 11470 355 10855 21902;21903 17580;17581 17580 2 9606 Homo sapiens 0.0651043455989111 GVVPLAGTDGETTTQGLDGLSER Unmodified 2272.1183 0.11828382 26 A0A024QZ64;P09972;B7Z1Y2;B7Z3K9;B7Z1N6;A8MVZ9;C9J8F3;J3KSV6;J3QKP5;K7EKH5 ALDOC Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C yes no 0 0 0 2.62 0.992 1 3 2 2 57.773 57.787 2;3 3.1947E-89 17392 20230619_1881_Aki_TMTPro18x_K_F2 338.73 313.47 211480 162320 183580 208270 190310 204590 208860 196540 236020 245560 243120 249790 246810 229580 243730 271190 249050 282430 195260 149020 189050 206470 197680 207010 210360 202730 239290 245690 249350 252680 251760 239620 248360 272410 238470 268010 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 3524199999.9999995 11471 26 10856 21904;21905;21906;21907;21908;21909;21910;21911 17582;17583;17584;17585;17586;17587 17582 6 9606 Homo sapiens 0.033109409343069274 GVVPLAGTNGETTTQGLDGLSER Unmodified 2271.1343 0.13426824 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;A0A0M4FNU3;H3BR04;H3BUH7;H3BMQ8;H3BU78 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 4.5 0.5 1 1 55.67 55.706 3 1.0643E-75 16504 20230619_1883_Aki_TMTPro18x_K_F4 314.02 304.61 45431 30719 39335 40946 67204 46838 53471 57008 59720 57692 54877 57833 63225 58815 56000 64887 62883 68907 41917 28229 40860 40600 67033 47214 54895 57524 60344 58270 56920 58741 63962 60947 57502 65309 60141 65383 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 844600000 11472 3378 10857 21912;21913 17588 17588 1 9606 Homo sapiens 0.04954647171189208 GVVQELQQAISK Unmodified 1298.7194 0.71941505 2288;2925 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;H0YCK7;E9PIZ1;P29692;P29692-3;E9PK01;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;E9PMW7;E9PN91 EEF1D Elongation factor 1-delta no no 0 0 0 1 0 1 61.732 61.732 2 0.00015976 19228 20230619_1880_Aki_TMTPro18x_K_F1 136.48 103.63 12941 11791 13421 10744 14945 16800 14896 14938 18475 15388 16546 15440 18128 11857 15957 20551 14219 18210 11979 10785 13601 11030 15408 16492 15133 15392 18536 15535 17127 15569 18322 12822 16197 20364 13649 17306 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100520000 11473 2288;2925 10858 21914 17589 17589 1 9606 Homo sapiens 0.0820041179774762 GVVQLFNAVQK Unmodified 1201.6819 0.68190733 2010 Q9Y3B9;A8K201 RRP15 RRP15-like protein yes no 0 0 0 4 0 1 61.123 61.126 2 8.8188E-06 18798 20230619_1883_Aki_TMTPro18x_K_F4 178.94 119.59 51887 43127 46742 54112 41775 61112 54555 52795 55413 50204 44208 38954 51674 41923 57353 53413 47626 42687 47944 39572 47902 53821 44250 61031 54289 54447 55960 50557 46208 40193 52752 43760 57660 52910 45628 40676 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22179000 11474 2010 10859 21915 17590 17590 1 9606 Homo sapiens 0.08913365322791833 GVVSGEVER Unmodified 930.47706 0.47705951 2225 B2R5U7;Q03701 CEBPZ CCAAT/enhancer-binding protein zeta yes no 0 0 0 1.5 0.5 1 1 35.144 35.172 2 8.6422E-06 7758 20230619_1881_Aki_TMTPro18x_K_F2 176.44 96.994 129480 101530 108970 131680 157140 159130 149080 144830 195950 160360 173730 174550 173880 142100 155070 156730 199100 173940 119540 93214 113260 130810 159210 158530 152150 149370 196000 161750 179270 175410 176570 148470 160440 158240 189900 165120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173630000 11475 2225 10860 21916;21917 17591 17591 1 9606 Homo sapiens 0.009040065124281682 GVVTAEMFR Unmodified 1008.5063 0.50625115 1775 A0A8I5KVF8;Q6MZM4;Q6MZP3;Q8N3U4;Q8N3U4-2;B2R8Y6;Q6AI02;Q6MZM3;B1AMT4;A0A8I5KUG8;B1AMT1;B1AMT2;B1AMT3 DKFZp686P16143;DKFZp686I05169;STAG2;DKFZp686P168;DKFZp686C21148 Cohesin subunit SA-2 yes no 0 0 0 7 0 1 50.614 50.695 2 0.047972 13895 20230619_1887_Aki_TMTPro18x_K_F7 62.969 51.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11476 1775 10861 21918 17592 17592 1 9606 Homo sapiens 0.0023382753706755466 GVVTNGLDLSPADEK Unmodified 1513.7624 0.76240208 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7;P07197-2 NEFM Neurofilament medium polypeptide yes no 0 0 0 4 0 1 54.109 54.124 3 1.0185E-05 15858 20230619_1883_Aki_TMTPro18x_K_F4 111.64 102.11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11477 1958 10862 21919 17593 17593 1 9606 Homo sapiens 0.026071370645240677 GVVVLAK Unmodified 684.45341 0.45341094 3794;3964 Q04828;H0Y804;B4DK69;P52895;P17516;A0A3B3IRI8;Q2XPP3;S4R3Z2;A0A0A0MSS8;P42330;P42330-2 AKR1C1;AKR1C2;AKR1C4;AKR1C3 Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C3 no no 0 0 0 2 0 2 48.859 48.924 2;3 0.018813 13934 20230619_1881_Aki_TMTPro18x_K_F2 114.67 47.612 160940 129830 130810 242800 472680 549800 1057400 1024500 1384200 190130 261310 315710 217060 241120 296310 244280 323190 291300 148580 119740 142200 240090 480000 542630 1039600 990670 1341900 242360 319580 312880 227770 251040 301090 248260 308740 276300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 946780000 11478 3794;3964 10863 21920;21921 17594;17595 17594 2 9606 Homo sapiens 0.0985623753656455 GVVVVIK Unmodified 712.48471 0.48471107 3051 H0YKD8;P46779;P46779-2;P46779-3;Q59F34;H0YMF4;P46779-4;P46779-5 RPL28 60S ribosomal protein L28 yes no 0 0 0 2.5 0.5 1 1 51.162 51.207 2;3 0.0061398 14998 20230619_1881_Aki_TMTPro18x_K_F2 142.42 72.983 674480 557900 607640 673170 574850 682250 699080 672870 687600 753040 743650 742470 834840 647680 646250 871980 820570 875990 623200 511720 622810 670520 603380 688950 697440 690360 703830 756230 764210 751250 839890 683450 671360 872130 783810 831780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1162800000 11479 3051 10864 21922;21923 17596;17597 17596 2 9606 Homo sapiens 0.11696810570651905 GVYGYRPR Unmodified 966.50355 0.50354903 4364 Q96HY7;C9JWN1 DHTKD1 Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial yes no 0 0 1 4.5 0.5 1 1 33.548 33.617 3 0.00066808 7002 20230619_1885_Aki_TMTPro18x_K_F5 137.77 100.04 62275 55371 59904 66312 83860 79452 78846 80286 81833 71057 88066 86621 73780 76706 78933 76725 92444 85618 57597 50771 61439 66247 84965 79399 79881 81708 83396 72790 89445 86910 76105 79389 80904 77620 88272 81251 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71370000 11480 4364 10865 21924;21925 17598 17598 1 9606 Homo sapiens 0.018957401944248886 GVYSEETLR Unmodified 1052.5138 0.51383895 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463;Q3B7X4 IMMT MICOS complex subunit MIC60 yes no 0 0 0 2.5 0.5 1 1 40.499 40.564 2 4.2674E-06 10046 20230619_1881_Aki_TMTPro18x_K_F2 185.55 138.48 503800 424560 454390 517150 654400 685720 631150 648660 807000 653610 744660 714450 776560 625100 533270 818680 797250 690070 465560 389430 469110 516810 663360 679820 642930 665130 809250 662490 767730 720020 780030 657880 562660 811580 759510 657190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 813330000 11481 3954 10866 21926;21927 17599;17600 17599 2 9606 Homo sapiens -0.01031741661677188 GWAPTFLGYSMQGLCK Oxidation (M) 1830.8433 0.84331171 669 Q8NCF7;A0A024RBE8;A0A024RBH9;Q00325-2;Q00325;F8VVM2;Q53HC3;F8VWR4;F8VWQ0 SLC25A3 Phosphate carrier protein, mitochondrial yes no 0 1 0 5 0 1 62.483 62.529 3 4.9444E-05 19045 20230619_1885_Aki_TMTPro18x_K_F5 103.76 93.973 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11482 669 10867 21928 17601 17601 413 1 9606 Homo sapiens -0.038876214885931404 GWDDLFNK Unmodified 993.4556 0.45559579 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 7 0 1 61.51 61.549 2 0.0020288 18467 20230619_1887_Aki_TMTPro18x_K_F7 144.38 86.88 228100 207360 274710 267590 194640 346540 295050 302110 372050 383280 351520 436080 482830 391230 368500 512440 487480 604820 211420 190260 274150 266300 212220 343020 294120 313800 374060 384670 367870 438660 483190 411700 384120 517640 466080 573050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 546550000 11483 3881 10868 21929 17602 17602 1 9606 Homo sapiens -0.04139378516288161 GWDEALLTMSK Oxidation (M) 1265.5962 0.59618837 3774 Q00688;Q53GD8 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3;Peptidyl-prolyl cis-trans isomerase yes no 0 1 0 6 0.816 1 1 1 57.996 58.056 3 0.015959 17293 20230619_1886_Aki_TMTPro18x_K_F6 60.305 48.667 234810 197480 218410 237450 213860 233030 244270 241160 260830 257240 249380 236880 263070 215770 234250 276090 270560 263120 217030 181120 223280 236500 223310 236210 245080 246270 264400 258480 256920 240770 266670 226510 240940 275630 258470 250080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 375380000 11484 3774 10869 21930;21931;21932 17603 17603 2456 1 9606 Homo sapiens -0.025985876450477008 GWDEALLTMSK Unmodified 1249.6013 0.60127375 3774 Q00688;Q53GD8 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 7.5 0.5 1 1 62.425 62.456 3 0.0021331 18893 20230619_1887_Aki_TMTPro18x_K_F7 79.82 61.552 628960 529340 638720 627350 526880 662240 704460 669610 702560 669840 631960 605060 692090 586050 740290 733140 651370 608900 581760 485410 646430 626200 561300 667040 700020 683660 713070 675040 654500 616830 706640 612820 746970 727550 623790 579810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 912970000 11485 3774 10869 21933;21934 17604 17604 1 9606 Homo sapiens -0.013542837824161325 GWDQGLLGMCEGEK Oxidation (M) 1594.6756 0.67557768 1472 Q53XJ5;A0A384NLA0;A0A494C1N0;P26885;F5H0N4 FKBP2 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase FKBP2 yes no 0 1 0 4.5 0.5 1 1 56.114 56.15 3 3.5745E-07 16688 20230619_1883_Aki_TMTPro18x_K_F4 136.33 119.65 96754 85643 95420 105860 104610 114120 105250 112150 135320 115140 121450 112070 120160 102500 121860 137060 129730 139470 89501 78554 97239 105360 107990 114730 107030 114760 135550 116150 125150 113680 122780 107890 124410 137250 124110 132410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 213540000 11486 1472 10870 21935;21936 17605;17606 17605 977 2 9606 Homo sapiens -0.09797308753172729 GWDQGLLGMCEGEK Unmodified 1578.6807 0.68066306 1472 Q53XJ5;A0A384NLA0;A0A494C1N0;P26885;F5H0N4 FKBP2 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase FKBP2 yes no 0 0 0 6 0 1 60.857 60.915 3 6.8815E-06 18494 20230619_1886_Aki_TMTPro18x_K_F6 125.93 109.24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11487 1472 10870 21937 17607 17607 1 9606 Homo sapiens -0.08553004890563898 GWEEGVAQMSVGQR Oxidation (M) 1548.6991 0.69909031 3736 P62942;F6T7Q3;Q0VDC6;Q1JUQ5 FKBP1A;FKBP12-Exip2 Peptidyl-prolyl cis-trans isomerase FKBP1A;Peptidyl-prolyl cis-trans isomerase yes no 0 1 0 4 0 1 45.241 45.285 3 3.5581E-05 11815 20230619_1883_Aki_TMTPro18x_K_F4 101.43 97.665 71055 51328 73227 74208 72511 81838 85980 73515 91170 80863 104560 84975 99044 79954 76485 102120 98542 108220 65671 47197 74212 73140 75732 81960 86061 75920 93037 81494 106240 86035 100170 83847 79537 102520 94138 102680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100500000 11488 3736 10871 21938 17608 17608 2412 1 9606 Homo sapiens -0.05331126924374985 GWEEGVAQMSVGQR Unmodified 1532.7042 0.70417569 3736 P62942;F6T7Q3;Q0VDC6;Q1JUQ5 FKBP1A;FKBP12-Exip2 Peptidyl-prolyl cis-trans isomerase FKBP1A;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 5.2 0.748 1 2 2 52.282 52.347 2;3 8.5311E-17 14730 20230619_1885_Aki_TMTPro18x_K_F5 170.22 158.2 105900 93267 97124 108880 100530 121780 117400 119170 127200 134490 132300 135420 145730 124400 140550 146560 131950 143710 97901 85501 99536 108860 104700 122090 117710 122320 129300 135110 136130 137060 148040 129860 142580 146760 126410 136480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 730590000 11489 3736 10871 21939;21940;21941;21942;21943 17609;17610 17609 2 9606 Homo sapiens -0.04086823061766154 GWENHVEGQK Unmodified 1182.5418 0.54178503 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4 0.816 1 1 1 38.417 38.48 3 6.2404E-05 8902 20230619_1883_Aki_TMTPro18x_K_F4 136.81 104.8 214120 157940 197040 189780 231330 241220 234680 233840 273880 253260 285310 278430 305030 223520 270400 296030 296970 270480 197740 144930 202040 189780 237630 239900 237650 239870 277210 255690 292980 279760 308800 236320 277160 294830 283700 257280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 483790000 11490 3881 10872 21944;21945;21946 17611;17612 17612 2 9606 Homo sapiens -0.042184186815802605 GWGAEYHR Unmodified 974.43586 0.4358634 4092 Q6I9T1;Q68DB7;Q99717;A0A024RDR3;O15198-2;Q15797;O15198 MADH5;DKFZp781O1323;SMAD5;SMAD9;SMAD1 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 5;Mothers against decapentaplegic homolog 9;Mothers against decapentaplegic homolog 1 yes no 0 0 0 6 0 1 35.001 35.054 3 0.00038463 7629 20230619_1886_Aki_TMTPro18x_K_F6 128.61 83.295 35887 28347 35611 31070 42852 43020 43546 43890 54159 43081 45109 45351 48900 34525 42254 36562 50699 42763 33174 25982 36278 31338 43936 42631 44185 44735 54188 43665 46870 45548 49433 36121 43511 37078 48372 40580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25348000 11491 4092 10873 21947 17613 17613 1 9606 Homo sapiens -0.052377097363887515 GWGPDYPR Unmodified 946.42972 0.42971539 189 K7EIU8;A0A024R274;Q13485 SMAD4 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 4 yes no 0 0 0 6 0 1 44.386 44.476 2 0.035473 11450 20230619_1886_Aki_TMTPro18x_K_F6 75.189 55.712 80980 70514 85804 83393 171040 115140 112780 85460 130570 95095 101500 95597 103350 115820 94598 91488 107950 102920 74947 64654 87933 83571 168770 113560 117530 89681 130840 95771 105550 97705 105220 117420 97062 93013 103120 97653 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21755000 11492 189 10874 21948 17614 17614 1 9606 Homo sapiens -0.045642279679100284 GWNILTNSEK Unmodified 1160.5826 0.58258722 1339 E5KRK5;A0A291FIZ5;P28331-4;P28331;P28331-2;P28331-5;C9JPQ5 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 4.5 3.5 1 1 56.141 56.141 3 0.00013548 16924 20230619_1880_Aki_TMTPro18x_K_F1 123.51 96.399 52288 48766 55431 52758 61540 74747 71664 70927 78988 56440 61428 61908 66720 58596 55476 64782 60641 60056 48415 44665 56145 53269 63752 73815 71875 72314 79280 58029 64083 62515 67414 60859 56946 64719 57967 57094 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40973000 11493 1339 10875 21949;21950 17615;17616 17615 2 9606 Homo sapiens 0.008719226380208056 GWPLELLCEK Unmodified 1243.6271 0.62709457 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;Q59GP7;K7EQR9 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 7.25 0.829 1 1 2 63.804 63.834 3 1.2582E-05 19395 20230619_1888_Aki_TMTPro18x_K_F8 147.75 0 369400 296100 327300 322300 252010 287590 336500 340070 324230 503600 401580 413090 535570 428490 339050 546180 471360 522000 341210 271360 334820 323140 270060 294790 334240 348090 335110 497090 414140 423930 532900 447940 356690 544970 450070 495870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 917200000 11494 3823 10876 21951;21952;21953;21954 17617;17618;17619 17618 3 9606 Homo sapiens 0.015026104598518941 GWPLYLSTK Unmodified 1063.5702 0.57023162 274 V9HW78;B2R5M8;A0A024R3Y6;O75874;Q6FIA4;Q6FI37;Q0QER2;B4DXS4 HEL-216;IDH1 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 4 0 1 61.188 61.191 2 0.0067226 18826 20230619_1883_Aki_TMTPro18x_K_F4 105.14 76.737 136880 135580 138330 132250 143850 178260 157110 140220 178700 63386 58510 51575 50927 49731 118170 59550 82375 57344 126740 124050 140480 134520 149500 175900 158200 143870 175670 68079 65467 52924 55502 51861 116670 59753 78989 54580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31067000 11495 274 10877 21955 17620 17620 1 9606 Homo sapiens 0.040989309656424666 GWPWLLPDGSPVDIFAK Unmodified 1896.9774 0.97742065 1500 A0A3B3IRP5;Q6P1J9;A0A0S2Z5M9;A0A1B0GUB2 CDC73 Parafibromin yes no 0 0 0 2.5 0.5 1 1 66.834 66.855 3 0.082152 21557 20230619_1881_Aki_TMTPro18x_K_F2 36.638 22.479 2369.8 2230.4 3464.6 2846.2 1674.2 3297.1 2134.2 4927.6 1657.7 2715.9 2750.2 3191 3068.9 3331.9 3259.1 3164.6 2807.9 3246.8 2201.7 2046 3398.6 2833.2 1900.3 3331.6 2123 4852.3 1763.6 2871.3 2788.8 3223.5 3134.7 3419.9 3285.5 3188.6 2694 3081.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4797200 11496 1500 10878 21956;21957 17621 17621 1 9606 Homo sapiens 0.06481103600117422 GWQDVTATSAYK Unmodified 1325.6252 0.62518031 3659 P55327-2;P55327-4;P55327;P55327-7;P55327-5;P55327-6;P55327-3;H0YC42;A5Y5A3 TPD52 Tumor protein D52 yes no 0 0 0 7.5 0.5 1 1 52.129 52.204 3 9.1226E-06 14582 20230619_1887_Aki_TMTPro18x_K_F7 136.27 118.47 271250 243250 284170 260710 158570 183470 186300 178050 254050 212450 221770 209300 237140 211490 227000 275470 246280 239820 251070 222800 285470 261050 175560 191420 188580 183420 253560 212920 229640 212880 241170 221380 232340 273670 235410 228190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 284940000 11497 3659 10879 21958;21959 17622;17623 17622 2 9606 Homo sapiens -0.024607270243677704 GWQDVTATSAYKK Unmodified 1453.7201 0.72014333 3659 P55327-2;P55327-4;P55327;P55327-7;P55327-5;P55327-6;P55327-3;H0YC42;A5Y5A3 TPD52 Tumor protein D52 yes no 0 0 1 2 0 1 49.095 49.16 3 1.3825E-06 14045 20230619_1881_Aki_TMTPro18x_K_F2 118.08 103.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11498 3659 10880 21960 17624 17624 1 9606 Homo sapiens 0.011432064468181125 GWQNSIR Unmodified 859.43005 0.43004974 3780;1942 P85037;P85037-2;B4DY33;A4D1Z4;A0A8B0SY93;B3KV39;Q4JHB7;A0A8B0T278;A0A8B0T273;A0A8B0T146;A0A8B0T069;Q53ZD3;A0A8B0SUS0;A0A8B0SXZ5;A0A8B0SXM7;A0A8B0SWN0;A0A8B0SUP7;Q4JHB6;A0A8B0SX55;Q05CX9;Q4JHB5;A0A8B0SY07;P58012;A0A8B0SXP0;Q01167-2;Q01167;E9PM37;E9PPI7 FOXK1;KIAA0415;FOXL2;FOXK2 Forkhead box protein K1;Forkhead box protein L2;Forkhead box protein K2 no no 0 0 0 1 0 1 40.204 40.204 2 0.04454 10170 20230619_1880_Aki_TMTPro18x_K_F1 80.098 55.466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11499 1942;3780 10881 21961 17625 17625 1 9606 Homo sapiens -0.005288082480547018 GWSQDLFR Unmodified 1007.4825 0.48247924 1143 A0A0S2Z5U1;Q8N183;A0A0S2Z5U2;D6RA56;A0PJB9;A0A7I2V3X5;A0A7I2V4Z7;A0A0S2Z5T4;A0A7I2YQX2 NDUFAF2 Mimitin, mitochondrial yes no 0 0 0 1 0 1 55.229 55.229 2 0.0052895 16520 20230619_1880_Aki_TMTPro18x_K_F1 113.94 70.729 82268 87193 85460 86789 69161 82685 75806 76687 91171 37210 32731 31018 35293 25157 62445 35411 40410 30162 76235 79774 86305 87687 73370 83818 76536 77745 89517 39631 36501 31613 37209 26706 61649 35215 38806 28741 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36476000 11500 1143 10882 21962 17626 17626 1 9606 Homo sapiens -0.02096269905086956 GWTGQESLSDSDPEMWELLQR Unmodified 2463.1013 0.10125355 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;B4DP88;G3V5L0;G3V4W5;G3V540;G3V2E4;G3V2W0;G3V4X0;G3V4T0;G3V3Y8;G3V241;G3V3C6;G3V2Y1 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 4.5 0.5 1 1 63.61 63.637 3 5.775E-13 19865 20230619_1883_Aki_TMTPro18x_K_F4 145.02 132.09 4071.1 3707.4 5416.8 5610.8 6259.4 6876.4 7228 5700.2 6943.5 8319.4 9467.7 9825.6 8494.8 8410.8 8811.3 8826 8597.9 11252 3777.4 3407.9 5406.2 5523.1 6453.9 6828.8 7220.5 5979.1 7193.5 8312.3 9556.8 9854.7 8721.5 8742.3 8943.9 8998.6 8246.9 10652 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169920000 11501 657 10883 21963;21964 17627 17627 1 9606 Homo sapiens -0.0717730294318244 GWTGQESLSDSDPEMWELLQR Oxidation (M) 2479.0962 0.096168169 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;B4DP88;G3V5L0;G3V4W5;G3V540;G3V2E4;G3V2W0;G3V4X0;G3V4T0;G3V3Y8;G3V241;G3V3C6;G3V2Y1 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 1 0 4 0 1 58.827 58.83 3 0.00039605 17832 20230619_1883_Aki_TMTPro18x_K_F4 74.776 70.066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11502 657 10883 21965 17628 17628 404 1 9606 Homo sapiens -0.08421606805768533 GWVNTLVGGQK Unmodified 1157.6193 0.61930707 1507 P14735;A0A7I2V610;A0A3B3ISG5;A0A7I2V2P6;A0A7I2V3E3;A0A7I2YQV5;A0A7I2V4Q3;A0A7I2V2S1;A0A7I2V612;A0A7I2V373;A0A7I2YQS6;A0A7I2V4A4;A0A7I2V634 IDE Insulin-degrading enzyme yes no 0 0 0 4 0 1 57.073 57.078 3 0.023404 17107 20230619_1883_Aki_TMTPro18x_K_F4 58.476 41.451 66277 55837 62284 71911 66191 74184 66795 67160 67883 80678 79422 86746 87214 77656 75284 90747 93113 99552 61266 51246 63716 71311 68469 74681 67378 69473 69639 80974 81334 87457 88233 81095 77834 91428 88963 94438 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158350000 11503 1507 10884 21966 17629 17629 1 9606 Homo sapiens 0.0468021925460107 GWVTFDR Unmodified 879.4239 0.42390173 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1 SRRT Serrate RNA effector molecule homolog yes no 0 0 0 7.5 0.5 1 1 51.456 51.534 2 0.0051349 14192 20230619_1888_Aki_TMTPro18x_K_F8 143.23 76.193 160010 137670 142170 159900 154160 164610 166460 169600 193950 185530 170220 164850 191580 154340 176680 185600 182150 176190 147870 126210 146190 159750 159530 166260 167970 173320 195160 186040 176680 167950 194090 161260 180270 185470 174180 167460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185650000 11504 4464 10885 21967;21968 17630 17630 1 9606 Homo sapiens -0.020633264795719697 GYAFIEFASFEDAK Unmodified 1593.7351 0.73512469 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 0 6 0 1 63.958 64.004 3 1.8433E-08 19914 20230619_1886_Aki_TMTPro18x_K_F6 133.88 119.62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11505 1658 10886 21969 17631 17631 1 9606 Homo sapiens -0.03799346475875609 GYAFIEYEHER Unmodified 1412.6361 0.63607935 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-3;M0QYR1 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 0 3.5 1.12 1 1 1 1 45.8 45.865 3 5.1005E-09 12088 20230619_1883_Aki_TMTPro18x_K_F4 174.77 145.47 265740 231000 251210 253950 245420 297860 242980 256580 333140 315010 311900 296150 335180 287060 312140 358600 323030 326430 245710 211660 256320 255230 255740 296950 248030 266470 333490 314790 321910 301320 340280 300160 318670 357290 308990 310370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 963960000 11506 33 10887 21970;21971;21972;21973 17632;17633;17634 17634 3 9606 Homo sapiens -0.053733246500996756 GYAFITFCGK Unmodified 1162.5481 0.54811597 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PH35;A0A6Q8PEX7 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 4.5 0.5 1 1 60.614 60.641 3 0.00029704 18159 20230619_1885_Aki_TMTPro18x_K_F5 113.18 98.614 400340 365320 397090 438770 349830 392160 433170 450250 423390 366980 419660 387770 335530 361120 408140 409450 384560 368650 370420 334950 403210 436580 369270 401450 431810 453820 431380 375950 427040 392100 349060 375500 412470 408470 368060 350640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 303210000 11507 3254 10888 21974;21975 17635;17636 17636 2 9606 Homo sapiens -0.026656167744249615 GYAFNHSADFETVR Unmodified 1612.727 0.72701962 3690 P61160;P61160-2;B4DHK9;B4DWQ5;Q8IY98 ACTR2 Actin-related protein 2 yes no 0 0 0 5.25 0.829 1 1 2 44.952 45.022 3 2.6905000000000004E-29 11617 20230619_1885_Aki_TMTPro18x_K_F5 261.35 236.02 204120 174550 188590 230220 231680 267480 231560 230700 278690 276470 272280 248390 273090 226690 241330 303060 280270 265520 188670 160230 193790 228290 237430 266750 234910 239430 281080 276160 279500 252830 277180 238590 248450 301040 267680 252650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1117700000 11508 3690 10889 21976;21977;21978;21979 17637;17638;17639 17638 3 9606 Homo sapiens -0.05483480672660335 GYAFVHFETQEAADK Unmodified 1711.7842 0.78420015 1667 Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;H0Y5F5;H0YCC8;H0YEQ8 PABPC4 Polyadenylate-binding protein 4;Polyadenylate-binding protein yes no 0 0 0 3.5 0.5 1 1 51.874 51.921 3 5.7009E-14 14872 20230619_1883_Aki_TMTPro18x_K_F4 175.15 152.95 110580 87415 107430 124480 101610 118530 132910 128470 135120 146890 148600 163510 182900 145760 143400 167130 168130 185900 102200 80336 109430 122550 106870 120490 132270 131090 138150 147930 153410 164600 183640 152140 148010 168580 160750 176310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251310000 11509 1667 10890 21980;21981 17640 17640 1 9606 Homo sapiens -0.04322058186903632 GYAFVQYSNER Unmodified 1332.6099 0.6098646 2053 Q5QPL9;A8K4T9;Q53GL6;Q9UKM9-2;Q9UKM9;Q5QPM1;B4DSJ1;Q5QPM2 RALY RNA-binding protein Raly yes no 0 0 0 7 0 1 47.622 47.71 2 7.9188E-12 12496 20230619_1887_Aki_TMTPro18x_K_F7 235.66 212.97 177800 145000 150130 146810 174100 187430 185440 183640 198210 116460 104520 85594 99885 85369 141860 120230 114360 85290 164200 132800 155160 148770 179270 186420 186640 186030 197250 120510 111440 88451 104120 89884 141870 118390 109480 81486 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290660000 11510 2053 10891 21982 17641 17641 1 9606 Homo sapiens -0.04313593821575523 GYAFVTFCTK Unmodified 1192.5587 0.55868065 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2V5Q6;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 3.5 0.5 1 1 58.716 58.732 3 0.00024851 17777 20230619_1883_Aki_TMTPro18x_K_F4 115.82 61.285 407900 360540 377510 366140 368460 438070 440120 399860 455600 332670 297590 255720 314900 258550 357960 322430 316390 302080 377130 330100 385880 370490 385610 436730 439940 409400 456680 337760 313440 263430 322860 270100 360740 321980 303020 287190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 289880000 11511 1680;2265 10892 21983;21984 17642;17643 17643 2 9606 Homo sapiens -0.029896341200128518 GYAIELPEDIEENR Unmodified 1646.7788 0.77878042 2375 Q5SZR4;B3KPI5;B4DZR8;Q9Y2W6-3;Q9Y2W6;B4DJ68 TDRKH Tudor and KH domain-containing protein yes no 0 0 0 2 0 1 58.076 58.091 2 5.0879E-08 17857 20230619_1881_Aki_TMTPro18x_K_F2 156.71 133.28 10185 10195 8047.7 16374 12104 14478 15733 16425 18152 18338 16025 15775 17635 15559 19056 17091 18331 20333 9414.3 9375.9 8470.8 15982 12363 14817 15716 16696 18278 18351 16617 16119 18018 16145 19301 17338 17560 19270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30134000 11512 2375 10893 21985 17644 17644 1 9606 Homo sapiens -0.018737817693818215 GYATDESTVSSVQGSR Unmodified 1642.7435 0.74345755 1029 A0A0F7KYT8;A0A8V8TMQ1;A0A0F7L0Q8;A0A8V8TNP6;B4DM78;Q14341 FXR1 yes no 0 0 0 3 0 1 39.406 39.461 3 1.0769000000000001E-25 9367 20230619_1882_Aki_TMTPro18x_K_F3 173.54 164.09 24237 20319 24792 25623 25684 31859 28903 31593 34635 27510 32388 28323 29508 28452 28718 27326 32087 26349 22419 18644 25164 25524 26726 31722 29139 32170 34837 28062 33182 28738 30195 29268 29392 27437 30628 25057 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75365000 11513 1029 10894 21986 17645 17645 1 9606 Homo sapiens -0.052204442972197285 GYAVLGGER Unmodified 920.47158 0.4715802 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 4.5 0.5 1 1 42.373 42.436 2 0.0031004 10503 20230619_1885_Aki_TMTPro18x_K_F5 116.25 111.36 425980 357250 399990 362060 382330 441380 400820 378000 468500 277930 331930 281830 231500 242500 344450 325430 362740 262360 393750 327150 407970 366570 399330 438970 405170 387960 467220 286780 342460 285020 245280 255500 349150 322270 346190 250230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 472690000 11514 3606 10895 21987;21988 17646 17646 1 9606 Homo sapiens 0.00816327720622212 GYAYTFITEDQAR Unmodified 1533.71 0.70997257 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 5.5 0.5 1 1 55.032 55.104 2 8.2088E-36 15870 20230619_1885_Aki_TMTPro18x_K_F5 248.88 199.46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11515 1002 10896 21989;21990 17647;17648 17647 2 9606 Homo sapiens -0.03553401278441015 GYAYVEFENPDEAEK Unmodified 1759.7577 0.75771063 2826 Q15287;D3DU92;H3BTC0;H3BMM9;H3BV80;Q15287-2;Q15287-3;H3BPG5;H3BMS0 RNPS1 RNA-binding protein with serine-rich domain 1 yes no 0 0 0 2.5 0.957 1 2 2 1 55.727 55.749 2;3 2.1978E-13 16699 20230619_1882_Aki_TMTPro18x_K_F3 210.35 185.56 71849 55972 63975 77802 64913 75913 73156 69045 72158 97388 93632 98397 91810 80751 92254 105680 89317 106750 66356 51428 65745 76712 67609 76732 73275 71799 74540 96883 95028 99220 93780 85189 93725 105810 85607 101320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 860930000 11516 2826 10897 21991;21992;21993;21994;21995;21996 17649;17650;17651 17651 3 9606 Homo sapiens -0.0917779186891039 GYCYVEFKEEK Unmodified 1450.6439 0.64386684 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DYA2 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 1 5.5 0.5 1 1 50.158 50.234 3 2.0329E-06 13993 20230619_1886_Aki_TMTPro18x_K_F6 158.04 139.97 263970 219390 247870 267930 242970 267620 284180 279970 244080 333550 319470 282010 296190 241810 330650 273830 258850 210580 243990 201260 253190 266630 253740 270960 283030 286580 254320 332400 323100 287230 304440 252450 331330 271390 248030 200860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218180000 11517 1555 10898 21997;21998 17652 17652 1 9606 Homo sapiens -0.06342933444830123 GYDDRDYYSR Unmodified 1308.5371 0.53709359 2322 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995-3;P62995;H7BXF3;H7C2L4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta yes no 0 0 1 2.8 0.748 2 2 1 35.209 35.264 2;3 2.446E-10 7743 20230619_1881_Aki_TMTPro18x_K_F2 191.52 169.64 913670 694150 837800 957110 1007100 1057500 1021900 1054300 1148900 1330900 1485200 1422900 1518400 1224300 1100600 1621700 1584100 1370800 843890 637800 860610 945990 1032900 1061600 1033800 1084500 1177400 1332600 1508400 1434300 1528600 1290300 1156000 1607800 1509500 1305500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3087399999.9999995 11518 2322 10899 21999;22000;22001;22002;22003 17653;17654;17655 17653 3 9606 Homo sapiens -0.10483347615013372 GYDFESETDTETIAK Unmodified 1704.7366 0.73664084 3806 Q06210-2;Q06210;A0A6I8PRN4;A0A6I8PTT9 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 0 2 0 1 53.416 53.444 3 9.929E-06 15939 20230619_1881_Aki_TMTPro18x_K_F2 113.37 101.35 46249 35674 47128 49600 38865 44797 42473 44703 51692 52734 58853 69566 70225 56492 58380 79146 62578 83777 42756 32779 47687 48876 41146 45651 42939 45911 52439 53368 60609 69425 70724 59911 59929 79357 59980 79445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75403000 11519 3806 10900 22004 17656 17656 1 9606 Homo sapiens -0.08753801968441621 GYDRYEDYDYR Unmodified 1513.611 0.61098681 3861 Q549U1;Q13595-4;Q13595-3;Q13595 HSU53209;TRA2A Transformer-2 protein homolog alpha yes no 0 0 1 2 0 1 40.907 40.981 3 0.0031912 10233 20230619_1881_Aki_TMTPro18x_K_F2 77.674 76.131 87311 59692 85609 88718 105170 105190 103470 93839 124630 125520 127590 126020 147330 114710 123060 148600 141050 137480 80638 54919 87411 87389 107590 104860 105060 97511 125950 125200 131600 127560 148530 120530 126690 148090 134760 130710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154350000 11520 3861 10901 22005 17657 17657 1 9606 Homo sapiens -0.12527424243330643 GYDSDPVK Unmodified 879.39741 0.39741221 3433 P11388;P11388-2;P11388-3;P11388-4 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 3 0 1 40.713 40.772 2 0.011385 9933 20230619_1882_Aki_TMTPro18x_K_F3 96.711 63.59 203420 134870 246040 242040 243080 294730 228030 241920 245100 246990 328450 367400 297210 306950 267320 238140 360540 331960 188200 124420 246330 236130 252420 292580 231560 250970 251970 253010 331930 365190 303300 314770 277310 245840 343870 314400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53384000 11521 3433 10902 22006 17658;17659 17658 2 9606 Homo sapiens -0.047110601615713676 GYDVIAQAQSGTGK Unmodified 1393.6838 0.68375782 2105;3883 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;J3KTB5;J3QL43;J3QR64;J3QLN6;J3KS25;J3QKZ9;B4E047;B4E102;Q86WD0;E7EMV8;J3KS93;J3KT04;Q14240;Q14240-2;E7EQG2;J3KSN7 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 0 7 0.816 2 2 2 49.442 49.521 2;3 1.0763999999999999E-28 13321 20230619_1887_Aki_TMTPro18x_K_F7 260.57 217.71 198490 157660 178400 189920 212290 222310 215260 204220 225750 262920 249620 234120 280110 212660 207750 299120 266800 241260 183350 144630 183470 189580 217840 221990 217200 211430 230620 261640 256150 238370 281330 224700 216280 295690 254530 229860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6398299999.999999 11522 2105;3883 10903 22007;22008;22009;22010;22011;22012 17660;17661;17662 17661 3 9606 Homo sapiens 0.0026632955007244163 GYDYGPHFQGILEASLEGDSGR Unmodified 2367.0768 0.076753356 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 6 0.816 1 1 1 60.998 61.049 3 1.3112E-56 18575 20230619_1886_Aki_TMTPro18x_K_F6 288.92 268.48 317660 224390 275310 303610 252000 283460 286100 293230 321290 383360 413520 451320 454550 403180 363420 527290 477140 548100 293150 206200 282990 299800 264700 288360 287770 301370 329260 384550 421890 453560 458480 423960 378370 528510 455920 520110 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1457699999.9999998 11523 3606 10904 22013;22014;22015 17663;17664;17665 17664 3 9606 Homo sapiens -0.052101950343967474 GYEEVHVPALKPK Unmodified 1465.7929 0.79291434 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9;O75643-2 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 1 8 0 1 47.107 47.155 4 0.0026529 12172 20230619_1888_Aki_TMTPro18x_K_F8 84.169 64.062 52598 43274 44791 57030 51337 58424 51548 59033 62784 62381 67301 67386 71633 57074 57643 65448 70622 65227 48578 39730 46321 56461 52863 58975 52335 60342 63517 63008 69010 67832 72286 59671 59617 65607 67408 61975 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254090000 11524 3312 10905 22016 17666 17666 1 9606 Homo sapiens 0.078649602402038 GYEEWLLNEIRR Unmodified 1576.7998 0.79979063 387;1069 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;B4DFY0;A0A494C1A0;P35609;P35609-2;A0A804HI95;B7Z2N5;B7Z4K1;Q59FD9;B7Z4P6;A0A494C060;F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;B4E337 ACTN1;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4 no no 0 0 1 6.5 0.5 1 1 61.014 61.064 3 2.9523E-07 18265 20230619_1887_Aki_TMTPro18x_K_F7 160.56 137.42 52915 51729 58929 45406 39743 44309 51853 49551 56492 61334 54656 49687 61160 50151 60357 62515 50085 52330 49035 47293 58987 46452 43110 45060 51759 50572 57256 60993 56429 51002 62147 52377 60836 62055 48036 49803 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 695350000 11525 387;1069 10906 22017;22018 17667 17667 1 9606 Homo sapiens 0.03446273120789556 GYELLFQPEVVR Unmodified 1448.7664 0.76636524 1594 O60716;H0YC95;O60716-3;O60716-2;Q68DU0;C9JZR2;A0A669KB05;O60716-5;O60716-11;O60716-10;O60716-9;O60716-17;Q96FS1;O60716-21;O60716-19;O60716-13;O60716-18;O60716-6;O60716-8;O60716-4;O60716-7;A0A669KB62;O60716-20;O60716-22;O60716-23;O60716-16;O60716-24;O60716-12;O60716-15;O60716-14;Q7KZJ3;O60716-26;A0A024R4Z0;O60716-25;O60716-27;O60716-29;O60716-31;A0A804HIL4;A0A804HK15;A0A024R4Y7;O60716-32;O60716-28;O60716-30;A0A804HJM1 CTNND1;DKFZp781O2021 Catenin delta-1 yes no 0 0 0 6.5 0.5 1 1 62.047 62.09 2 0.0028846 18755 20230619_1887_Aki_TMTPro18x_K_F7 108.31 57.247 183820 149620 179350 201740 168040 186610 182210 186140 202710 223230 198780 215110 234540 190930 179300 249980 207470 254390 169940 137400 182510 199210 175850 189830 183610 191220 205420 223320 205760 217890 235570 200940 185270 250270 198560 241400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 317390000 11526 1594 10907 22019;22020 17668;17669 17669 2 9606 Homo sapiens 0.05993271348870621 GYESDPVK Unmodified 893.41306 0.41306227 1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;Q59H80;Q6W6M6 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 0 0 0 3 0 1 40.388 40.444 2 0.073131 9813 20230619_1882_Aki_TMTPro18x_K_F3 67.757 19.94 23652 16892 24607 26757 25447 32921 28751 28754 31866 27054 36137 39248 32717 30700 31587 25023 40763 30756 21860 15550 24951 26274 26490 32697 28900 29624 32423 27810 36748 38975 33471 31633 32604 25589 38844 29188 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17831000 11527 1843 10908 22021 17670 17670 1 9606 Homo sapiens -0.03790773644516321 GYEVHGIVR Unmodified 1028.5403 0.54032847 2277 B2R9X3;O60547-2;O60547 GMDS GDP-mannose 4,6 dehydratase yes no 0 0 0 6 0 1 36.651 36.719 3 1.9359E-05 8250 20230619_1886_Aki_TMTPro18x_K_F6 145.17 114.1 43567 29565 37122 42337 52097 50530 56655 47561 63389 41342 52503 52520 51653 40709 47164 45968 56743 49676 40193 27190 38505 41794 53011 50409 57015 48658 63672 42496 54344 52420 52523 42670 48555 46326 54150 47169 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43749000 11528 2277 10909 22022 17671 17671 1 9606 Homo sapiens 0.02719992020342943 GYFEHREDR Unmodified 1207.537 0.53703401 95 Q9BUJ2;A0A0A0MRA5;Q9BUJ2-2;Q9BUJ2-4;A8K6U7;A8K3W4;B7Z4B8;A0A024R0J9;Q9BUJ2-3;A8K5K0;M0QYZ0;M0R3F1;M0QZV6;M0R0K8;M0QYI8 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 1 2.5 0.5 1 1 29.313 29.4 3 0.012787 5371 20230619_1882_Aki_TMTPro18x_K_F3 82.563 64.699 18077 13592 13166 18068 17201 17024 22754 19570 19749 19080 21950 21154 22950 17646 21443 23658 25777 20759 16670 12484 13878 17859 17679 17355 22512 19816 20370 19367 22461 21276 23310 18637 22081 23510 24587 19766 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21460000 11529 95 10910 22023;22024 17672 17672 1 9606 Homo sapiens -0.058433028243371155 GYFEYIEENK Unmodified 1290.5768 0.57683314 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PRI6 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 3.78 1.31 2 2 2 2 1 59.333 59.362 2;3 1.3403E-07 18130 20230619_1882_Aki_TMTPro18x_K_F3 204.07 166.96 1273500 1018400 1098700 1377400 1128300 1363500 1398600 1304800 1352000 1567700 1572500 1428000 1715900 1399400 1552700 1691400 1501100 1751100 1176000 935320 1133000 1360700 1177800 1378100 1393000 1344500 1389900 1565800 1608500 1455700 1738200 1460500 1579800 1698000 1438500 1661700 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 7391099999.999999 11530 3776 10911 22025;22026;22027;22028;22029;22030;22031;22032;22033 17673;17674;17675;17676;17677;17678 17674 6 9606 Homo sapiens -0.05683220664286637 GYGAGVVTVFK Unmodified 1096.5917 0.59169534 4618 Q9NX46;B4DHV5 ADPRHL2 Poly(ADP-ribose) glycohydrolase ARH3 yes no 0 0 0 3 0 1 56.506 56.542 2 0.089486 17017 20230619_1882_Aki_TMTPro18x_K_F3 74.486 51.994 100190 78135 81625 95942 69837 91080 94198 89866 99503 133170 114740 113880 138330 115490 97634 146810 136820 139930 92475 71696 84391 95358 74277 92424 93746 93063 101860 131640 117990 116540 138510 120760 102430 146490 130550 132970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26884000 11531 4618 10912 22034 17679 17679 1 9606 Homo sapiens 0.04726315994366814 GYGDRDGYGR Unmodified 1114.4792 0.47918478 3963 Q96E39;Q2VIN3 RBMXL1 RNA binding motif protein, X-linked-like-1 yes no 0 0 1 3 0 1 29.289 29.392 3 0.0040553 5376 20230619_1882_Aki_TMTPro18x_K_F3 77.358 62.482 21224 19083 28135 21619 33468 24980 28179 29638 28164 26251 31493 28857 28134 26172 27297 29952 35651 30362 19690 17487 28030 21697 34079 25148 28738 29854 28824 26785 31993 29107 28804 27274 28245 30056 33994 28853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20192000 11532 3963 10913 22035 17680 17680 1 9606 Homo sapiens -0.07347564749761659 GYGFAEYMK Unmodified 1064.4637 0.46371763 864 A0A087WZ13;E9PAU2;Q8IY67-2;Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes no 0 0 0 8 0 1 55.75 55.812 2 0.011405 16057 20230619_1888_Aki_TMTPro18x_K_F8 95.741 59.861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11533 864 10914 22036 17681 17681 1 9606 Homo sapiens -0.06593567591198735 GYGFCEYQDQETALSAMR Oxidation (M) 2140.883 0.88300427 2592;4494 B4DUD5;P33240-2;P33240;E9PID8;E7EWR4;B3V096;A0A0A0MT56;Q9H0L4 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant no no 0 1 0 3.5 0.5 1 1 52.327 52.371 3 0.00017447 15088 20230619_1883_Aki_TMTPro18x_K_F4 76.586 76.586 82107 75454 89862 90665 100010 109540 111070 121950 126600 85993 89050 89569 103770 77700 91803 108190 87718 84282 76040 69181 90811 90597 103350 109600 111820 122710 126490 88984 93787 90451 104810 82158 93427 106860 83944 80317 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 83384000 11534 2592;4494 10915 22037;22038 17682 17682 1566 1 9606 Homo sapiens -0.14180191066452608 GYGFCEYQDQETALSAMR Unmodified 2124.8881 0.88808965 2592;4494 B4DUD5;P33240-2;P33240;E9PID8;E7EWR4;B3V096;A0A0A0MT56;Q9H0L4 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant no no 0 0 0 5 0 1 57.467 57.526 3 3.0227E-07 16903 20230619_1885_Aki_TMTPro18x_K_F5 118.21 112.74 27018 20211 28415 28345 29116 31010 42566 32813 42566 34110 31567 33191 29789 27831 35956 27972 30348 34587 24980 18575 28772 27992 30519 31192 42095 33456 42896 34390 32861 33529 30768 28896 36102 28506 29120 32766 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36095000 11535 2592;4494 10915 22039 17683 17683 1 9606 Homo sapiens -0.12935887203866514 GYGFGLIK Unmodified 853.46979 0.46978929 1286 A0A1L1UHR1;P21796;B3KTS5;C9JI87;B4DEI3 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 0 3.8 0.748 2 2 1 57.702 57.728 2;3 0.00046431 17499 20230619_1882_Aki_TMTPro18x_K_F3 163.41 111.72 948970 1043100 1064900 919250 1418500 1929700 1441400 1533400 2080300 92401 61421 81986 105770 89190 522130 113200 108860 82754 880250 953320 1077300 952610 1449700 1864600 1469900 1554200 1996000 174430 160980 85247 127040 92999 498510 112990 107970 79019 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1298300000 11536 1286 10916 22040;22041;22042;22043;22044 17684;17685 17684 2 9606 Homo sapiens 0.037193187026559826 GYGFGMVK Oxidation (M) 873.40547 0.40547447 4704 Q9Y277;Q9Y277-2;E5RFP6;E5RJN6;E5RHZ6;E5RHE1;E5RFL1 VDAC3 Voltage-dependent anion-selective channel protein 3 yes no 0 1 0 1.5 0.5 1 1 47.493 47.531 3 0.038219 13283 20230619_1881_Aki_TMTPro18x_K_F2 53.17 43.166 151930 132550 143320 144820 238060 277420 209140 190300 266060 53072 61508 52290 55769 43088 87059 50995 55882 46754 140480 121440 147790 146940 239230 268400 214020 196740 259000 61466 72497 52965 58634 45183 86052 51005 53705 44486 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94892000 11537 4704 10917 22045;22046 17686 17686 2871 1 9606 Homo sapiens -0.03629204445792311 GYGFGMVK Unmodified 857.41056 0.41055985 4704 Q9Y277;Q9Y277-2;E5RFP6;E5RJN6;E5RHZ6;E5RHE1;E5RFL1 VDAC3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 2.5 0.5 1 1 52.546 52.605 2 0.0021669 15331 20230619_1882_Aki_TMTPro18x_K_F3 146.21 110.02 226480 244110 222570 207750 295180 468500 305300 310040 428760 44405 28919 40162 40169 39808 120760 38273 51948 44519 209810 223060 227650 216310 302500 449990 310650 320370 412620 59886 49236 41133 44668 40986 117120 39105 50317 42246 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235450000 11538 4704 10917 22047;22048 17687;17688 17688 2 9606 Homo sapiens -0.023849005831721115 GYGFIEYEK Unmodified 1104.5128 0.51277632 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8;A0A0J9YVR6;A0A0J9YWM1;H0YCP8 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 0 0 5.5 1.12 1 1 1 1 54.808 54.863 2 6.77E-05 15940 20230619_1886_Aki_TMTPro18x_K_F6 160.88 128.04 487090 408940 446000 518570 435460 533310 516270 506900 534330 596830 573350 547780 646050 516430 539410 662350 561730 600090 450150 375260 456840 514780 455760 537430 516510 522140 545320 596780 589390 557470 651710 541590 552320 659430 537510 570480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 464800000 11539 1044 10918 22049;22050;22051;22052 17689;17690;17691 17690 3 9606 Homo sapiens -0.03529956030570247 GYGFVDFDSPAAAQK Unmodified 1571.7256 0.72562264 2651 B4E2S3 no no 0 0 0 6.67 0.471 1 2 58.601 58.658 3 8.890799999999999E-19 17562 20230619_1886_Aki_TMTPro18x_K_F6 201.04 180.62 92567 76355 84532 95375 79227 91275 100120 104480 104450 118480 112800 115330 124120 117080 110760 134220 144400 146270 85537 70060 86537 94714 83308 92904 99902 106180 106580 118860 115860 117300 125800 121600 114850 135210 137850 138790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 379040000 11540 2651 10919 22053;22054;22055 17692;17693 17692 2 9606 Homo sapiens -0.037371147613612266 GYGFVHFETQEAAER Unmodified 1739.7903 0.79034816 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;A0A024R9E2;H0YBN4;E5RGH3 PABPC1 Polyadenylate-binding protein 1;Polyadenylate-binding protein yes no 0 0 0 5 2 1 1 1 1 1 1 1 47.797 47.868 3 1.369E-25 12829 20230619_1885_Aki_TMTPro18x_K_F5 235.22 205.87 538620 438290 535050 591310 523200 621120 607550 558130 709380 663870 645740 601030 688580 571580 616170 719870 714860 657730 498000 402500 544060 584780 547090 624200 610740 577560 714400 663600 667080 612250 698000 598470 633830 717270 682630 625580 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3239199999.9999995 11541 566 10920 22056;22057;22058;22059;22060;22061;22062 17694;17695;17696 17696 3 9606 Homo sapiens -0.04995539955370987 GYGFVSFFNK Unmodified 1164.5604 0.56039521 2994 F8W8I6;Q59G98;P31483;C9JTN7;P31483-3;P31483-2;H7BY49 TIA1 Nucleolysin TIA-1 isoform p40 yes no 0 0 0 5.5 0.5 1 1 62.796 62.843 3 0.00026759 19236 20230619_1885_Aki_TMTPro18x_K_F5 94.85 77.824 90989 82479 95251 83147 95974 129520 100330 104750 151540 39980 30556 25761 27694 22654 63068 30858 28120 24078 84224 75506 96372 84580 100020 126830 102420 106950 146300 43687 36951 26754 30062 23913 61401 30605 27215 22956 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98688000 11542 2994 10921 22063;22064 17697 17697 1 9606 Homo sapiens -0.01530257039735261 GYGFVSFYNK Unmodified 1180.5553 0.55530983 2070 O15187;Q2TSD2;A8K5C4;Q01085;Q01085-2;E7ETJ9;B4DHS3;Q59G49;Q49AS9 TIAL1 Nucleolysin TIAR yes no 0 0 0 4 0 1 59.242 59.244 3 0.0007785 18042 20230619_1883_Aki_TMTPro18x_K_F4 95.502 74.106 38191 38191 38102 36061 39321 56791 49610 41296 63651 28580 27313 21582 29316 24564 34450 22114 25398 24594 35363 34932 38745 36884 41148 55480 49801 42928 62481 29451 29799 22348 30104 25126 34371 22445 24383 23336 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106770000 11543 2070 10922 22065 17698 17698 1 9606 Homo sapiens -0.02774560902344092 GYGGNRFESR Unmodified 1141.5265 0.52646932 3874 Q14011;Q53XX5;Q14011-2;K7EQR7;D6W5Y5;K7EPM4;K7EMY9;K7EJV1;Q14011-3 CIRBP Cold-inducible RNA-binding protein yes no 0 0 1 7 0.816 1 1 1 30.988 31.035 3 4.5583E-05 5702 20230619_1887_Aki_TMTPro18x_K_F7 126.29 108.63 170530 159590 144980 136370 207180 139230 165870 183370 155330 145750 162770 123470 135050 103100 153400 155170 178250 112750 157630 145900 150160 139920 208470 141970 169400 183180 159170 148550 165230 125900 139540 109780 157020 152730 169860 107780 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 212560000 11544 3874 10923 22066;22067;22068 17699;17700;17701 17700 3 9606 Homo sapiens -0.03863285478769285 GYGLFAGPCK Unmodified 1068.5063 0.50625115 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 3 0 1 54.102 54.154 2 0.00024063 15994 20230619_1882_Aki_TMTPro18x_K_F3 157.52 127.26 343670 311890 289920 250950 370600 557550 387200 372190 519070 41711 32561 42304 45703 39633 115640 48431 43904 41838 317590 285050 300200 262690 380560 536000 393000 384010 500360 60990 57118 43109 49756 41422 112020 48380 42686 39816 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94573000 11545 3758 10924 22069 17702 17702 1 9606 Homo sapiens -0.02526172462944487 GYGPATQVR Unmodified 947.48248 0.48247924 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4;H7C1C4;B4DKE2;Q53FE7;Q9Y5Z7 HCFC1;HCFC2 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6;Host cell factor 2 yes no 0 0 0 7 0.816 1 1 1 35.301 35.332 2 0.00015752 7416 20230619_1887_Aki_TMTPro18x_K_F7 146.27 114.33 139330 110220 115010 134630 155520 175970 154010 162540 206680 91144 95198 76611 83062 74025 122920 92994 117530 78216 128620 101130 119600 134470 158480 174460 156890 165020 202740 95734 102340 78499 87145 77424 123810 92427 112230 74590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116160000 11546 1331 10925 22070;22071;22072 17703;17704;17705 17704 3 9606 Homo sapiens 0.00663730094913717 GYHGPLDLYPEFYR Unmodified 1725.8151 0.81510635 866 H0YCW6;B4DQI3;B4DYW0;A0A087WZ62;Q9H6U8-2;Q9H6U8-4;Q9H6U8;Q9H6U8-3 ALG9 Alpha-1,2-mannosyltransferase ALG9 yes no 0 0 0 7 0 1 57.267 57.322 3 7.4516E-06 16712 20230619_1887_Aki_TMTPro18x_K_F7 109.02 95.597 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11547 866 10926 22073 17706 17706 1 9606 Homo sapiens -0.018768600819839776 GYHLNEEGTR Unmodified 1174.5367 0.53669966 2766 CON__ENSEMBL:ENSBTAP00000016046;P23142;Q8NBH6;B4DUV1;A0A8S0MAG0;A0A8S0LWY1;B1AHL2;P23142-2;P23142-3;P23142-4 FBLN1 Fibulin-1 yes no 0 0 0 2.5 0.5 1 1 31.458 31.531 3 5.2039E-10 6316 20230619_1881_Aki_TMTPro18x_K_F2 188.99 136.27 + 37073 18766 34533 32368 51953 49512 45249 43731 60970 49044 62968 78872 55827 57327 60417 57386 56100 69330 34179 17326 35533 31777 52376 48629 46483 45216 61251 50208 64313 77918 57479 59790 61107 58355 53809 65675 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112370000 11548 2766 10927 22074;22075 17707 17707 1 9606 Homo sapiens -0.04358722544179727 GYIDLSK Unmodified 794.41742 0.41741937 3389 Q53XC0;P05198;H0YJS4;G3V4T5;B4DM12 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 7 0.816 1 1 1 50.394 50.473 2 0.017544 13770 20230619_1887_Aki_TMTPro18x_K_F7 113.7 24.269 555860 434960 472350 522020 555140 625170 602640 584270 677360 761490 757580 817150 850280 660850 594280 857340 878430 819290 513210 399020 488380 521380 571700 623440 607150 604410 689610 761600 777630 821530 852500 697420 625910 855470 837320 778790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 667220000 11549 3389 10928 22076;22077;22078 17708 17708 1 9606 Homo sapiens 0.011987355690507684 GYIFLEYASPAHAVDAVK Unmodified 1949.9887 0.98871362 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q86UM1;C9JZG1 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 8 0 1 61.484 61.512 3 5.2237E-16 18407 20230619_1888_Aki_TMTPro18x_K_F8 164.62 152.6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11550 487 10929 22079 17709 17709 1 9606 Homo sapiens 0.05171880903571946 GYIGVVNR Unmodified 876.48175 0.48175096 3619;1021 A0A0U1RQP1;A0A0D9SFE4;A0A994J7J4;Q05193-3;Q05193;B4DHH5;A0A0D9SFB1;B7ZAC0;B4DK06;Q05193-5;Q05193-2;Q59GI5;A0A994J5P0;A0A1B0GU67;A0A1B0GUX5;P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96 DNM1;DNM2 Dynamin-1;Dynamin-2 no no 0 0 0 1.5 0.5 1 1 41.906 41.946 2 0.00098124 10940 20230619_1880_Aki_TMTPro18x_K_F1 151.7 116.98 401870 281580 356770 394220 327610 433810 397690 381440 453860 450370 524500 544370 522890 465510 442200 569010 687760 632680 370920 258850 366060 389220 345220 434190 398740 395290 461880 454380 534790 545800 530290 488210 465290 573290 655290 600450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 284730000 11551 1021;3619 10930 22080;22081 17710;17711 17710 2 9606 Homo sapiens 0.038569354458559246 GYIPIYTPFFMR Unmodified 1503.7584 0.75844309 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 0 7 0 1 64.702 64.729 2 0.00041712 19982 20230619_1887_Aki_TMTPro18x_K_F7 147.24 119.99 89144 90443 81093 68214 73820 96422 79118 79778 93764 24045 20502 25174 24334 23058 41236 24643 27758 27453 82491 82595 82869 71214 77557 95024 79903 81156 91554 27463 24732 25465 25562 23933 40796 24951 26687 26046 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36909000 11552 3609 10931 22082 17712 17712 1 9606 Homo sapiens 0.02671420827732618 GYISPYFINTSK Unmodified 1388.6976 0.69761697 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;B7Z532;Q53SE2;E7ESH4;B9VP19;B9VPB4 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 4.4 1.02 1 2 1 1 59.011 59.042 3 6.5151E-18 17859 20230619_1883_Aki_TMTPro18x_K_F4 224.42 193.86 1770200 1687600 1692900 1843700 1829800 1945900 2057700 2099100 1983600 2338500 2185500 1970200 2448600 1883400 2028900 2738400 2458700 2309500 1638000 1545800 1729100 1851300 1894800 1964300 2059700 2139700 2035500 2338300 2242800 2015700 2469700 1991500 2098100 2711900 2347300 2198700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5913099999.999999 11553 272 10932 22083;22084;22085;22086;22087 17713;17714;17715 17714 3 9606 Homo sapiens 0.018816070491766368 GYIWNYGAIPQTWEDPGHNDK Unmodified 2460.1135 0.11347321 3922 Q15181;V9HWB5;Q5SQT6 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 0 0 7 0.816 1 1 1 61.472 61.512 3 1.9927E-11 18447 20230619_1887_Aki_TMTPro18x_K_F7 123.55 115.84 356390 319570 382040 393300 304760 388160 357610 329580 347800 535920 459250 473560 547380 463380 396990 591690 508130 587430 329930 293090 384890 391060 324330 391520 357470 346400 360330 528430 469770 483150 548730 485220 413580 591670 485650 557700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1724899999.9999998 11554 3922 10933 22088;22089;22090 17716;17717 17717 2 9606 Homo sapiens -0.058178984178539395 GYIWNYGTLPQTWEDPHEK Unmodified 2333.0753 0.075296793 4504 Q9H2U2;Q9H2U2-2;H0Y9D8;B4DR66;B4DFH3;D6RGV9;D6RGI1 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes no 0 0 0 8 0 1 61.367 61.396 3 1.9326E-07 18367 20230619_1888_Aki_TMTPro18x_K_F8 111.33 95.026 31441 22057 31025 28242 28059 30044 28385 29830 35483 32748 34099 35493 35866 33844 39089 40072 33996 37418 29044 20257 31483 28047 29394 30241 28840 30565 35690 33032 35149 35860 36720 35273 39418 40022 32600 35555 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35874000 11555 4504 10934 22091 17718 17718 1 9606 Homo sapiens -0.03791784332452153 GYLADPAKFPEAR Unmodified 1433.7303 0.73031409 2887 E5RIZ4;Q9P015 MRPL15 39S ribosomal protein L15, mitochondrial yes no 0 0 1 8 0 1 49.324 49.397 3 0.00033526 13256 20230619_1888_Aki_TMTPro18x_K_F8 95.345 74.883 140030 133240 153400 173220 173380 173410 186910 184870 156800 184440 200680 137400 139190 102280 203060 119280 122900 88057 129720 122250 155140 171640 178570 175640 186800 188050 163250 184860 200850 140540 146800 107630 200470 118150 118130 84096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167180000 11556 2887 10935 22092 17719 17719 1 9606 Homo sapiens 0.030798141720651984 GYLDDPTVPR Unmodified 1131.556 0.55603812 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4;Q0PHS1 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 3.5 0.5 1 1 46.032 46.093 2 1.623E-13 12327 20230619_1882_Aki_TMTPro18x_K_F3 224.36 169.81 523000 420240 460250 486670 565970 656890 568120 571130 689550 748580 820700 917810 845660 710970 876890 868550 894620 964110 483070 385350 474570 488280 580160 649360 576510 594020 701150 752050 837780 916700 863660 748590 892080 875670 856270 914450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 708480000 11557 1464 10936 22093;22094 17720;17721 17720 2 9606 Homo sapiens -0.004477662532735849 GYLDKLEPSK Unmodified 1148.6077 0.60773933 3504 V9HW26;P25705;P25705-2;P25705-3 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 1 7.5 0.5 1 1 50.811 50.888 3 0.00069546 13858 20230619_1888_Aki_TMTPro18x_K_F8 101.39 76.176 237240 212790 251780 270940 294970 289680 320140 307180 266050 330290 353970 215690 236880 153090 355680 137470 130170 65725 219610 195230 255320 269100 303100 291990 319720 313160 277750 328800 353220 222130 250390 159370 345920 135200 126280 63422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1365700000 11558 3504 10937 22095;22096 17722 17722 1 9606 Homo sapiens 0.039379774406370416 GYLGPEQLPDCLK Unmodified 1488.7283 0.72826518 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 6.33 0.471 2 1 58.112 58.175 2;3 1.7034E-05 17048 20230619_1887_Aki_TMTPro18x_K_F7 157.78 120.43 824800 642380 840480 893540 826080 847390 877720 808880 881790 1050500 1109900 1208400 1123200 1068800 1166500 1176700 1165700 1309700 762560 590240 852470 880940 859830 859620 882470 836010 907980 1053300 1129700 1214400 1148600 1112400 1185500 1188300 1116300 1242000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2944799999.9999995 11559 297 10938 22097;22098;22099 17723;17724 17724 2 9606 Homo sapiens 0.0034501737191021675 GYLISGSSYAR Unmodified 1172.5826 0.58258722 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 2.5 0.5 1 1 46.321 46.399 2 4.2674E-12 12502 20230619_1882_Aki_TMTPro18x_K_F3 253.05 228.12 642440 491110 564980 631900 527490 632240 631450 607780 652540 744430 695700 672130 735420 621660 640610 858140 784590 759640 593210 450900 580270 626510 554170 638620 631430 626380 665880 742680 713330 684200 744930 655380 662240 852370 749120 722650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 566940000 11560 2126 10939 22100;22101 17725;17726 17726 2 9606 Homo sapiens 0.003199226380502296 GYLLYGPPGCGK Unmodified 1280.6223 0.62234354 280 H7BZF6;C9J1S9;Q53EX1;A8JZZ8;A0A024R445;Q9Y276 BCS1L Mitochondrial chaperone BCS1 yes no 0 0 0 3 0 1 54.922 54.968 3 0.0012248 16326 20230619_1882_Aki_TMTPro18x_K_F3 85.958 70.419 60161 47051 59417 62572 61337 69555 68508 65712 74729 68365 67331 56728 73199 60601 61794 76555 70505 68583 55608 43209 60473 61999 63765 69702 68849 67470 75484 68623 69610 58315 73978 63239 63599 76186 67361 65232 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41790000 11561 280 10940 22102 17727 17727 1 9606 Homo sapiens -0.006742736829210116 GYLPSHYER Unmodified 1120.5302 0.53015772 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q53GM6;I3L1T8 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 6 0.816 1 1 1 36.61 36.686 3 8.0782E-06 8175 20230619_1885_Aki_TMTPro18x_K_F5 163.32 122.29 122470 75169 105430 121250 129390 142620 139900 132430 163750 136670 162770 159110 163960 140810 140320 141930 180750 163190 112940 69265 108990 118850 132850 142290 141140 136130 165310 138640 167050 159890 166220 145920 145330 143820 172430 154840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 385040000 11562 1863 10941 22103;22104;22105 17728;17729;17730 17728 3 9606 Homo sapiens -0.025286157049322355 GYLVTQDELDQTLEEFK Unmodified 2026.9735 0.97351706 2873 E5KT65;P19388;A0A087WVZ9;A0A0A0MQR7 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes no 0 0 0 2.5 0.5 1 1 64.7 64.719 3 2.6754E-06 20443 20230619_1882_Aki_TMTPro18x_K_F3 106.19 95.553 6272.3 6995.9 7082.2 6606.7 6073.5 9198 7722.4 8227.4 6868.3 8206 9117.2 9296.7 11315 9361.5 7593.9 9948.5 10704 13395 5819.2 6397.1 7112.8 6743.9 6446.4 9079.3 7670.3 8467.8 7140.9 8325.7 9342.7 9393.3 11301 9693 7972.6 10172 10230 12677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35302000 11563 2873 10942 22106;22107 17731 17731 1 9606 Homo sapiens 0.00110924525097289 GYMDLMPFINK Unmodified 1327.6305 0.63046539 2268 V9HW51;B2R960;O43396;Q59G46;K7ER96;K7EML9 HEL-S-114;TXNL1 Thioredoxin-like protein 1 yes no 0 0 0 3 0 1 63.879 63.91 3 0.0025022 20090 20230619_1882_Aki_TMTPro18x_K_F3 76.228 62.322 39257 32250 44862 46468 43709 53427 43294 49087 53548 42063 36974 33309 47063 40548 45904 50247 44012 40960 36343 29638 45100 45835 45523 53366 44015 50239 53308 42656 39144 34504 47668 42094 46617 49810 42108 39014 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52586000 11564 2268 10943 22108 17732 17732 1 9606 Homo sapiens -0.020244627577540086 GYNDDYYEESYFTTR Unmodified 1921.7643 0.76425257 3617 P50402;A0A804HIV7;Q5HY57 EMD Emerin yes no 0 0 0 2.5 0.5 1 1 54.337 54.361 3 1.5501E-10 16302 20230619_1881_Aki_TMTPro18x_K_F2 150.76 145.33 44438 41225 46216 51470 41315 46569 48246 48520 55504 74777 65865 79808 80611 65321 73819 80801 78894 88037 41138 37811 46758 51075 43496 47516 48492 50145 56662 74275 67838 80229 81457 68704 75503 81331 75500 83508 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126560000 11565 3617 10944 22109;22110 17733;17734 17733 2 9606 Homo sapiens -0.15975898708188652 GYNFEDLTDR Unmodified 1228.536 0.53603095 1557 A0A7I2YQL3;A0A7P0SXD0;A0A7I2YQQ9;A0A499FIZ0;Q9H7D7-2;Q9H7D7;H0Y9R3;B4DRF0 WDR26 WD repeat-containing protein 26 yes no 0 0 0 2.5 0.5 1 1 52.139 52.191 2 0.0014057 15402 20230619_1881_Aki_TMTPro18x_K_F2 129.39 99.721 47487 40735 46529 56096 41823 62646 62656 57304 72675 62761 58600 59707 63876 54214 61316 69988 62040 71554 43916 37410 47368 55445 44509 62670 62241 59072 72880 63073 61034 60575 64909 56949 62487 70137 59418 67911 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80638000 11566 1557 10945 22111;22112 17735 17735 1 9606 Homo sapiens -0.06909561983911772 GYNLLKPMGK Unmodified 1119.6111 0.61105057 178 A0A024R1Z6;Q99536;Q99536-3;B3KUF8;Q99536-2;K7ESA3;K7ENX2;K7EM19 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes no 0 0 1 5.5 0.5 1 1 51.871 51.947 3 0.030619 14611 20230619_1885_Aki_TMTPro18x_K_F5 60.518 51.33 74576 67095 81131 90484 83949 90396 101200 99158 101510 93191 96149 74679 79604 65290 114120 62219 72234 56770 69052 61594 81982 89447 87371 91604 101050 100540 103140 93929 98113 76351 83338 67518 112830 62460 69410 54035 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173210000 11567 178 10946 22113;22114 17736 17736 1 9606 Homo sapiens 0.056029490136324966 GYNPAEVGAAGK Unmodified 1132.5513 0.55128709 1528 Q13144;A0A3B3IUB1;A0A3B3ITG6;Q59HD8 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes no 0 0 0 6 0 1 44.049 44.141 2 3.5661E-08 11295 20230619_1886_Aki_TMTPro18x_K_F6 178.67 118.23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11568 1528 10947 22115 17737 17737 1 9606 Homo sapiens -0.009686503960438131 GYNPGLLVHPDLAYLQAEGGGDR Unmodified 2411.187 0.18697251 1551 A0A494C157;A0A494C1E9;D6RH30;P19838;P19838-2;A0A510GAH8 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes no 0 0 0 6 0 1 59.754 59.816 3 4.699E-05 18076 20230619_1886_Aki_TMTPro18x_K_F6 77.045 65.94 16954 12619 15639 13255 16260 17813 17158 17044 15248 18378 20469 20001 19060 14433 20508 16242 17297 19884 15658 11564 15990 13407 16859 17654 17199 17496 15862 18538 20698 20036 19545 15181 20629 16511 16599 18837 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27036000 11569 1551 10948 22116 17738 17738 1 9606 Homo sapiens 0.03782650024686518 GYPEVALHFVK Unmodified 1258.671 0.67100829 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3IU89 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 1.5 0.5 1 1 54.913 54.925 3 3.4556E-05 16357 20230619_1880_Aki_TMTPro18x_K_F1 135.99 111.19 61082 44364 52157 59218 51383 66531 65008 62761 82263 62797 62483 77238 87260 77490 67934 105760 91853 100250 56373 40756 53775 58663 53923 66597 65262 64395 82000 63962 66213 77808 87420 81385 70951 105400 87712 95246 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175330000 11570 3647 10949 22117;22118 17739 17739 1 9606 Homo sapiens 0.05201962948490291 GYPHLCSICDLPVHSNK Unmodified 1995.9295 0.92950095 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991;H0Y8T4 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 0 1.5 0.5 1 1 47.943 47.979 4 3.775E-38 13531 20230619_1880_Aki_TMTPro18x_K_F1 252.73 240.93 430170 301810 369000 461800 372200 381290 396570 385080 342520 405220 400380 400480 474180 372410 302950 480080 457230 426390 396940 277750 380470 451870 386730 391700 396950 393960 354760 408130 411150 405990 473370 390840 320550 477180 435770 405670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1385100000 11571 1059 10950 22119;22120 17740;17741 17740 2 9606 Homo sapiens -0.028626616538758753 GYPHWPAR Unmodified 982.47733 0.47733428 3306;2314;4171;182 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;M0R0J3;B2RDE8;A0A384NPW1;P51858;B7Z525;A0A024R216;Q9Y3E1;H3BPQ6;O75475;Q05CM9;O75475-3;O75475-2;Q8N4N4 HDGFRP2;HDGF;HDGFRP3;PSIP1 Hepatoma-derived growth factor-related protein 2;Hepatoma-derived growth factor;Hepatoma-derived growth factor-related protein 3;PC4 and SFRS1-interacting protein no no 0 0 0 3.4 1.85 1 1 1 1 1 39.042 39.101 3 3.1443E-05 9185 20230619_1882_Aki_TMTPro18x_K_F3 178.84 165.33 312110 258770 279150 345440 416710 421510 363460 387910 479880 358890 385610 367690 391850 325350 356930 401700 454030 387060 288370 237600 288740 342560 420500 419710 373050 397730 478260 364800 400180 371630 398180 341060 369140 401520 433010 368030 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2257800000 11572 4171;2314;182;3306 10951 22121;22122;22123;22124;22125 17742;17743;17744;17745 17744 4 9606 Homo sapiens -0.014605289770656782 GYPPEDIFNLVGK Unmodified 1447.7347 0.73473076 4582 Q9NR45 NANS Sialic acid synthase yes yes 0 0 0 7.5 0.5 1 1 63.522 63.55 3 1.9622E-05 19464 20230619_1887_Aki_TMTPro18x_K_F7 118.48 102.59 139250 143400 147120 159630 156930 176380 183390 172840 193300 175930 214470 240900 237840 196180 208410 237950 243870 284890 129030 131330 149040 160140 162910 177040 183670 176970 197120 179620 220260 240100 240580 206110 214570 240970 233280 269940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 409020000 11573 4582 10952 22126;22127 17746;17747 17746 2 9606 Homo sapiens 0.028772785949286117 GYPPPVAAKPTFGR Unmodified 1456.7827 0.78268401 184 Q9UDY2-7;Q9UDY2;A0A1B0GTW1;Q9UDY2-3;A0A3B3ITE1;A0A024R233;A0A2R8YDH4;A0A3B3IRI3;B7Z954;Q9UDY2-6;A0A3B3ISZ5;A0A3B3IS03 TJP2 Tight junction protein ZO-2 yes no 0 0 1 5 0 1 46.851 46.927 3 0.0018205 12471 20230619_1885_Aki_TMTPro18x_K_F5 75.102 63.889 47271 36403 39218 48185 45072 50450 50309 48983 55399 72907 67825 57927 73358 53297 67618 73152 63830 60501 43632 33431 40655 47706 46520 50808 50580 50773 56736 71916 69181 59355 74341 56219 68681 72472 61086 57610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42137000 11574 184 10953 22128 17748 17748 1 9606 Homo sapiens 0.07256397305627615 GYPTLLLFR Unmodified 1078.6175 0.61751616 4089 Q86UY0;Q6EHZ3;Q658S9;Q8NBS9;A0A024QZV0;Q8NBS9-2 TXNDC5;STRF8;DKFZp666I134;hCG_1811539 Thioredoxin domain-containing protein 5 yes no 0 0 0 6 0 1 62.663 62.714 2 0.0042278 19357 20230619_1886_Aki_TMTPro18x_K_F6 95.605 58.23 147840 153140 119520 116400 236950 502950 191260 214830 592350 76246 68918 86671 88619 80955 93137 97319 90534 96276 136710 139850 125840 125470 238520 471980 207230 235270 558150 86301 96167 87421 90363 84527 94508 97469 86687 91433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48992000 11575 4089 10954 22129 17749 17749 1 9606 Homo sapiens 0.08135210236650892 GYQGYPGGDYSGGPQDGGAGK Unmodified 1986.8344 0.83439782 1061 A0A0S2Q0B1;O14497;O14497-2 ARID1A AT-rich interactive domain-containing protein 1A yes no 0 0 0 4.5 0.5 1 1 45.974 46.034 3 4.6854E-08 12067 20230619_1885_Aki_TMTPro18x_K_F5 107.33 103.49 32541 29467 31443 41151 35385 36527 37630 33331 44644 51995 51157 51456 53730 49878 46758 60615 64435 51055 30101 27061 32148 40510 36492 37221 38022 34798 45386 51533 52289 52210 54471 52037 48716 60171 61387 48642 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64912000 11576 1061 10955 22130;22131 17750;17751 17751 2 9606 Homo sapiens -0.11954600319745623 GYQQQDAHEFMR Oxidation (M) 1524.6416 0.64157543 3052 Q498Y2;H0YKU8;Q6JHV3;H0YMI4;Q9Y6I4;B4DWJ6;Q9Y2R8;B3KMX7;H0YLB7;Q9Y6I4-2 USP3 Ubiquitinyl hydrolase 1;Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 0 1 0 3 0 1 33.936 34.002 3 0.000104 7176 20230619_1882_Aki_TMTPro18x_K_F3 106.47 99.096 22530 19089 19698 23774 26385 30694 29405 29237 31026 29806 36207 29946 33137 29840 27454 31796 35624 33333 20816 17513 20379 23709 26974 30472 29517 29976 31708 30102 36720 30420 33662 30885 28491 31997 33990 31652 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34117000 11577 3052 10956 22132 17752 17752 1788 1 9606 Homo sapiens -0.09975969129982332 GYQQQDSQELLR Unmodified 1463.7005 0.70047052 4751 Q9Y5T5-5;Q9Y5T5-2;Q9Y5T5;Q9Y5T5-3 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes no 0 0 0 3 0 1 42.594 42.66 2 3.7323E-05 10747 20230619_1882_Aki_TMTPro18x_K_F3 129.16 101.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11578 4751 10957 22133 17753 17753 1 9606 Homo sapiens -0.012831695639533791 GYQTSPDLR Unmodified 1035.4985 0.49852324 4383 Q96N67;Q96N67-6;Q96N67-2;Q96N67-5;Q96N67-3;Q96N67-4;A0A2X0SSK2;B3KRG0;A0A1B0GWE0;B4DSH0 DOCK7 Dedicator of cytokinesis protein 7 yes no 0 0 0 4 0 1 37.591 37.635 2 0.027367 8589 20230619_1883_Aki_TMTPro18x_K_F4 73.665 23.624 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11579 4383 10958 22134 17754 17754 1 9606 Homo sapiens -0.017806084588755766 GYSDRDGYGR Unmodified 1144.4897 0.48974946 3564 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;B3KRG5;H3BUY5 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 0 0 1 3 0.816 1 1 1 29.174 29.255 3 0.00014065 5227 20230619_1883_Aki_TMTPro18x_K_F4 133.83 126.27 58310 42155 54893 60615 69561 64811 62434 67871 68357 64221 79086 88573 79537 74523 75089 54333 101680 89027 53852 38760 56283 59737 70817 65300 63577 69027 69721 65831 80726 88254 81017 76276 77772 56946 96945 84237 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 536610000 11580 3564 10959 22135;22136;22137 17755;17756;17757 17757 3 9606 Homo sapiens -0.07671582095326812 GYSFTTTAER Unmodified 1131.5197 0.51965261 3112;3679;4827 P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;I3L3I0;I3L1U9;A0A2R8YEA7;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;V9HVZ7 ACTG1;ACTB;PS1TP5BP1;HEL-176 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 0 0 5.62 1.32 2 2 2 1 1 41.153 41.217 2 3.1086E-20 10265 20230619_1888_Aki_TMTPro18x_K_F8 265.95 218.38 2525300 1925600 2110900 2767900 3390400 3902900 3407400 3197500 3939800 3446000 3377000 3227100 4068500 3034600 2865400 3583500 3489300 3167700 2330900 1770100 2202900 2738300 3423500 3842700 3448400 3321400 3961400 3464700 3519200 3280200 4070800 3167300 2973100 3567300 3330200 3014200 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 97520000000 11581 3112;3679;4827 10960 22138;22139;22140;22141;22142;22143;22144;22145 17758;17759;17760;17761;17762;17763;17764;17765;17766 17766 9 9606 Homo sapiens -0.040846431500312974 GYSSLLK Unmodified 766.4225 0.42250475 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 2 0 1 49.763 49.821 3 0.020956 14341 20230619_1881_Aki_TMTPro18x_K_F2 75.311 46.798 149450 115040 125270 148230 161150 200260 172890 159180 211590 116600 119190 91231 119610 97621 110320 123220 129800 86493 137960 105620 129990 147570 165160 197510 174680 164330 209380 119600 126470 94165 121660 101830 113480 121340 123700 82699 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137270000 11582 3137 10961 22146 17767 17767 1 9606 Homo sapiens 0.0299503943167565 GYSVEEVYDLAK Unmodified 1371.6558 0.65581174 2068 D6W5H1;A8K583;Q14966-4;Q14966-3;Q14966;B4E187;Q14966-5 ZNF638 Zinc finger protein 638 yes no 0 0 0 5 0 1 60.649 60.699 3 0.0089754 18184 20230619_1885_Aki_TMTPro18x_K_F5 69.451 55.421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11583 2068 10962 22147 17768 17768 1 9606 Homo sapiens -0.015149934299870438 GYSYDDIPDFDD Unmodified 1420.5307 0.5306708 4321 Q96A57;Q96A57-2 TMEM230 Transmembrane protein 230 yes no 0 0 0 1 0 1 62.858 62.858 2 3.2309E-05 19646 20230619_1880_Aki_TMTPro18x_K_F1 136.27 136.27 22243 21474 22082 28257 23233 31127 26704 26854 26184 34313 36052 37569 34839 34544 30842 38214 38477 48937 20590 19704 22509 27999 24170 31143 26718 27933 27128 34365 36481 37883 35442 35923 31899 38917 36813 46328 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109240000 11584 4321 10963 22148 17769 17769 1 9606 Homo sapiens -0.16277330357047504 GYTLADEEEDPLIYQHR Unmodified 2047.9487 0.9486993 1858 A0A8V8TRG9;P42345;A0A8V8TQM6;A0A8V8TQ52;B4E2H2;B4DZD5 MTOR Serine/threonine-protein kinase mTOR yes no 0 0 0 1 0 1 51.75 51.75 3 1.3596E-18 15099 20230619_1880_Aki_TMTPro18x_K_F1 183.41 181.19 22404 21837 24667 21238 23187 25560 26039 22415 24729 22780 21780 22574 20768 20007 22897 25141 19447 21190 20759 19980 24827 21576 24262 25461 26048 23136 25150 23002 22457 22841 21343 20977 23069 24957 18652 20162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48125000 11585 1858 10964 22149 17770 17770 1 9606 Homo sapiens -0.03335710557621496 GYTLVEYETYK Unmodified 1364.65 0.64999808 6 A0A023T787;Q9Y5S9;Q9Y5S9-2;A0A0J9YW13 RBM8;RBM8A RNA-binding protein 8A yes no 0 0 0 6 0.816 1 1 1 56.419 56.483 2 0.0010909 16387 20230619_1887_Aki_TMTPro18x_K_F7 116.52 101.37 18202 14858 15710 20454 16948 19556 17582 17298 19856 21602 19918 20089 22373 20851 20190 25625 23936 26424 16811 13648 16213 20171 17538 19787 17763 17950 20121 21558 20542 20495 22670 21732 20807 25701 22883 25080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 734630000 11586 6 10965 22150;22151;22152 17771 17771 1 9606 Homo sapiens -0.017740919416610268 GYTSIFNMETQQR Unmodified 1573.7195 0.7194914 3266 O43815;Q3B874;O43815-2 STRN Striatin yes no 0 0 0 8 0 1 55.531 55.593 2 0.019488 15965 20230619_1888_Aki_TMTPro18x_K_F8 77.379 48.292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11587 3266 10966 22153 17772 17772 1 9606 Homo sapiens -0.04441956264577129 GYTSLGSR Unmodified 839.41373 0.41373097 4254 Q8NFF5-2;Q8NFF5;Q5T190 FLAD1 FAD synthase;Molybdenum cofactor biosynthesis protein-like region;FAD synthase region yes no 0 0 0 7.5 0.5 1 1 36.18 36.207 2 0.0065893 7958 20230619_1888_Aki_TMTPro18x_K_F8 110.12 63.302 114860 90526 119470 125520 162960 155660 156710 160220 195100 101670 117120 113850 111710 94505 128650 96500 149870 102520 106220 83171 121660 124270 165500 155230 159480 161770 193170 106410 123630 114410 115060 98230 131490 97403 142860 97481 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49221000 11588 4254 10967 22154;22155 17773 17773 1 9606 Homo sapiens -0.012399342048070139 GYVQDLLECFSEK Unmodified 1586.7287 0.72865911 4745 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 PAXBP1 PAX3- and PAX7-binding protein 1 yes no 0 0 0 7 0 1 64.535 64.564 3 0.00014232 19904 20230619_1887_Aki_TMTPro18x_K_F7 96.734 77.901 67245 50208 64842 69771 52848 71448 70582 67881 69799 84792 76044 76198 93505 81931 66608 104970 88795 103200 62127 46139 65937 68858 56410 71993 70136 70056 71494 84516 78472 77978 93634 85547 69648 104890 84844 97988 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84619000 11589 4745 10968 22156 17774 17774 1 9606 Homo sapiens -0.04123607698875276 GYVSDIDCR Unmodified 1083.4655 0.46550855 1371 B4E2I4;E1CEI4;Q14TF0;A0A2R8YEL6;P48506;A0A2R8Y648 GCLC Glutamate--cysteine ligase catalytic subunit yes no 0 0 0 2 0 1 41.329 41.406 2 0.014843 10447 20230619_1881_Aki_TMTPro18x_K_F2 80.165 60.688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11590 1371 10969 22157 17775 17775 1 9606 Homo sapiens -0.07288558573213777 GYYDNPK Unmodified 855.37628 0.37628284 2970 F5H1S8;Q14165 MLEC Malectin yes no 0 0 0 5 0 1 39.911 40.001 2 0.0035359 9517 20230619_1885_Aki_TMTPro18x_K_F5 120.49 95.566 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11591 2970 10970 22158 17776 17776 1 9606 Homo sapiens -0.057190254704323706 GYYEQTGVGPLPVVLFNGMPFER Unmodified 2569.2675 0.26753101 2154 A8KAK1;Q9NYU2-2;Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 2 0 1 65.607 65.614 3 1.6025E-08 21069 20230619_1881_Aki_TMTPro18x_K_F2 107.74 91.435 2321.5 1573.3 2095.1 1727.8 1902.1 3174.9 3744.3 3140.4 2514.1 2437.8 1988.6 4161.8 3637.2 2817.6 3609.6 2705.3 4416.8 3539.2 2142.6 1443 2145.2 1752.8 2045.1 3096.4 3627.3 3192.2 2611.4 2552 2155.1 4092.5 3658.1 2945.8 3709.5 2770.4 4212.1 3355.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5506700 11592 2154 10971 22159 17777 17777 1 9606 Homo sapiens 0.045667950233564625 HAAEGEIYTK Unmodified 1117.5404 0.54038805 1959 E7EW84;A5YP36;B4DEZ1;B3KXY5;B7Z6G5;Q8TAG9-2;Q8TAG9;Q9NTA6;B2RDH5;Q9NUN4;F2Z3K0 EXOC6;SEC15L3;DKFZp761I2124 Exocyst complex component 6 yes no 0 0 0 3 0 1 36.76 36.815 3 0.0098547 8292 20230619_1882_Aki_TMTPro18x_K_F3 76.228 63.601 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11593 1959 10972 22160 17778 17778 1 9606 Homo sapiens -0.013680527703400003 HAALVSQPETTK Unmodified 1280.6725 0.67246486 275;1599 A0A024R3Z1;Q6NYC5;E7EV03;A0A669KB77;P11137-3;P11137 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 0 6.5 0.5 1 1 36.513 36.577 3 4.8554E-07 8161 20230619_1886_Aki_TMTPro18x_K_F6 151.98 127.12 52120 45485 51303 52408 49551 54343 66688 75717 94211 76824 83002 85022 72059 61523 73522 83879 80204 78817 48207 41694 52176 52428 52107 55299 67093 75858 93882 77823 85217 85148 73975 65401 75165 83620 76665 74920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 170230000 11594 275;1599 10973 22161;22162 17779;17780 17779 2 9606 Homo sapiens 0.043355522466072216 HAASTVQILGAEK Unmodified 1323.7147 0.71466402 4712 Q9Y2X3;B3KN82 NOP58 Nucleolar protein 58 yes no 0 0 0 8 0 1 43.369 43.38 3 2.8889E-05 10831 20230619_1888_Aki_TMTPro18x_K_F8 116.51 92.906 56452 61302 58869 54868 67462 64724 60846 68145 58815 60510 61552 59147 63135 45260 53678 61696 68449 61013 52325 56036 59687 56143 69115 64852 61717 69140 60183 61486 63075 59656 63891 48056 55606 61671 65297 57985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134380000 11595 4712 10974 22163 17781 17781 1 9606 Homo sapiens 0.06575527654990765 HADIVTTTTHK Unmodified 1222.6306 0.63060004 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4;H0YIZ0;G3V2Y4 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 6.5 0.957 1 2 2 1 33.374 33.428 3;4 1.1504E-12 6698 20230619_1887_Aki_TMTPro18x_K_F7 179.94 138.54 214760 144720 191930 197950 297280 263090 254130 264540 312520 274820 329510 386180 317190 295080 313480 296020 397630 379510 198190 133030 198420 196380 298910 261240 260520 270360 315660 280580 337140 383640 324200 307350 323360 302220 379510 359640 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 988720000 11596 657 10975 22164;22165;22166;22167;22168;22169 17782;17783;17784 17784 3 9606 Homo sapiens 0.02818996558062281 HADVGVALLANAPER Unmodified 1531.8107 0.81068967 466 A0A024R7P3;A0A024R7N2;Q9HD20-2;Q9HD20;Q8NC73;Q6ZUA1;Q9HD20-3 ATP13A1 Manganese-transporting ATPase 13A1 yes no 0 0 0 5.5 0.5 1 1 46.864 46.944 3 0.00096379 12574 20230619_1886_Aki_TMTPro18x_K_F6 74.783 56.521 158770 132920 156670 166030 144850 171280 167350 172580 208580 178980 209310 200800 199570 173260 176970 216080 234770 229400 146820 121960 159220 165040 152150 172810 168750 176400 210030 181260 214200 202040 203010 181890 183760 217080 224030 217770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171260000 11597 466 10976 22170;22171 17785;17786 17786 2 9606 Homo sapiens 0.06605675495075047 HADYIASYGSK Unmodified 1210.5619 0.56185177 3645 Q5T4U8;Q59GT6;Q6IB63;P53611 RABGGTB Geranylgeranyl transferase type-2 subunit beta yes no 0 0 0 7 0 1 40.696 40.764 3 2.774E-05 9564 20230619_1887_Aki_TMTPro18x_K_F7 125.72 106.4 47994 35087 44275 47710 40794 43741 42685 45066 46971 68978 77829 67124 73169 52948 49990 75380 73563 57897 44320 32239 45245 47088 42701 44567 43113 46586 48908 68320 78080 67787 73662 56285 52679 74339 70048 55233 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202950000 11598 3645 10977 22172 17787 17787 1 9606 Homo sapiens -0.03500667741627694 HAEATLGSGNLR Unmodified 1224.6211 0.62109799 4158 Q9H8S9;Q7L9L4;Q7L9L4-2;D6RCK3;B3KSH6;Q4W5E0;Q9H8S9-2 MOB1A;MOB1B;MOBKL1A;MOB4A MOB kinase activator 1A;MOB kinase activator 1B yes no 0 0 0 5 0.816 1 1 1 32.745 32.803 3 3.9133E-13 6685 20230619_1885_Aki_TMTPro18x_K_F5 164.81 139.34 42734 25875 36039 38293 49693 52314 47534 45893 51150 40321 54962 53296 51615 41398 52693 46331 60117 49706 39400 23818 37385 37816 50474 51676 48157 47180 52004 41460 56063 53133 52824 43361 53931 46695 57376 47213 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 225200000 11599 4158 10978 22173;22174;22175 17788;17789 17789 2 9606 Homo sapiens 0.017772282725672994 HAELIASTFVDQCK Unmodified 1617.7821 0.78209166 4650 Q9UBB4;A0A1W2PQD2;Q9UBB4-2;Q7Z524;B1AHE4 ATXN10 Ataxin-10 yes no 0 0 0 7 0 1 51.198 51.275 4 0.0015742 14181 20230619_1887_Aki_TMTPro18x_K_F7 60.157 34.439 60628 49403 59751 57175 56582 69122 60992 62495 78883 55912 48986 55330 55392 49034 62840 60249 61095 64062 56053 45298 60711 57278 59225 68827 61794 64119 78113 56893 52017 55972 56715 51382 63658 60587 58493 60795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31362000 11600 4650 10979 22176 17790 17790 1 9606 Homo sapiens -0.0020881019636362907 HAEMVHTGLK Oxidation (M) 1137.5601 0.56007764 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;Q5T0R2;Q5T0R1;Q5T0R4;Q5T0R3;Q5T0R5;Q5T0R6;Q5T0R7;Q5T0R9 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 1 0 6.33 0.745 1 2 3 31.44 31.511 3;4 0.0016887 6192 20230619_1886_Aki_TMTPro18x_K_F6 83.869 56.754 146580 102100 147030 160090 191870 181060 175870 172800 212650 181570 232490 230810 212430 191040 204550 189310 252650 226650 135420 93990 150040 157100 195120 181320 179390 177370 215200 184580 236700 230710 217170 198260 210690 192440 241080 214970 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 349290000 11601 2327 10980 22177;22178;22179;22180;22181;22182 17791;17792;17793;17794;17795 17793 1439 5 9606 Homo sapiens -0.0032000003122902854 HAEMVHTGLK Unmodified 1121.5652 0.56516301 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;Q5T0R2;Q5T0R1;Q5T0R4;Q5T0R3;Q5T0R5;Q5T0R6;Q5T0R7;Q5T0R9 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 0 0 6.67 0.471 1 2 34.628 34.694 3;4 9.7918E-06 7169 20230619_1887_Aki_TMTPro18x_K_F7 158.79 130.62 328710 224210 322250 340180 422080 410700 380510 357110 441050 407780 478980 495230 478440 423800 429150 441010 562300 490530 303580 206340 329430 334750 429030 408740 387920 369970 447350 412180 489700 496260 486200 440350 444620 445700 536220 465640 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 438520000 11602 2327 10980 22183;22184;22185 17796;17797;17798;17799 17798 4 9606 Homo sapiens 0.009243038313798024 HAFEEGLR Unmodified 957.46683 0.46682918 139 A0A087WWW8;A0A024R1E5;Q9Y6J0-2;Q9Y6J0;C9JT60;C9J068;Q8IVX9;Q05C66 CABIN1 Calcineurin-binding protein cabin-1 yes no 0 0 0 3 0 1 34.975 35.036 3 0.07209 7599 20230619_1882_Aki_TMTPro18x_K_F3 40.352 17.571 38580 46756 39117 37264 41392 41732 39326 47035 56022 50674 48100 44766 42421 45206 44953 39809 47822 43151 35786 42692 39705 38539 42757 42042 40310 47744 55809 50849 49453 45709 43663 46304 45794 40308 45696 40967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9059000 11603 139 10981 22186 17800 17800 1 9606 Homo sapiens -0.013605564221393252 HAFEIFR Unmodified 918.47119 0.47118627 283 Q53S54;A0A024R475;Q13618-2;Q13618;B7Z600;Q13618-3 CUL3 Cullin-3 yes no 0 0 0 4.5 3.5 1 1 44.968 44.982 3 0.00017223 11490 20230619_1888_Aki_TMTPro18x_K_F8 170.17 123.8 71670 65532 71985 72696 69802 84272 87324 78112 96851 54803 50523 40753 52731 40970 64595 55435 55635 44027 66323 60040 73091 73005 73199 84190 87271 79626 96147 56299 54090 42086 54302 43035 64926 54871 53237 41980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60045000 11604 283 10982 22187;22188 17801;17802 17802 2 9606 Homo sapiens 0.008689527914270911 HAGAYHCFSEEQGAR Unmodified 1718.722 0.72195102 4480 Q9C0C4;Q8NBN9;Q71RG3;Q9NX92;Q53RE7;Q6P5A5 SEMA4C Semaphorin-4C yes no 0 0 0 3.5 0.5 1 1 29.718 29.799 4 2.4074E-10 5553 20230619_1882_Aki_TMTPro18x_K_F3 119.87 113.84 11906 8382.7 11693 11332 15010 16136 14690 12878 16513 14907 17887 19594 16912 16638 15976 12907 17191 21343 10998 7703 11944 11262 15318 15877 14882 13439 16767 15106 18256 19561 17260 17063 16313 13514 16465 20167 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18495000 11605 4480 10983 22189;22190 17803 17803 1 9606 Homo sapiens -0.1086610780691899 HAIPIIK Unmodified 790.50651 0.50650915 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;B4E010;B4E3C4;O15523-3;C9J081;C9J8G5;A0A2R8Y4D2 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 2.5 0.5 1 1 43.035 43.108 3 0.050162 10965 20230619_1882_Aki_TMTPro18x_K_F3 60.151 35.816 289890 226110 281960 303870 293640 354030 331030 335120 404330 363190 389350 366210 423920 338280 331620 479480 439670 425750 267910 207680 287450 301080 305430 353620 333880 344370 407070 365760 401420 371060 427150 357360 345620 476090 419530 405000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 524470000 11606 1018 10984 22191;22192 17804 17804 1 9606 Homo sapiens 0.1028761531923692 HAIVICNR Unmodified 981.51782 0.51781889 3647 P53621;A0A3B3IT15;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITV3 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 3.67 3.09 1 1 1 31.933 31.955 3 0.00025263 6745 20230619_1880_Aki_TMTPro18x_K_F1 134.66 82.876 121370 83444 126780 116580 151560 135220 137090 148040 156980 131940 153640 158180 143680 133790 133730 141600 180400 151490 112160 76715 128600 115280 154820 135660 139740 149870 158590 135010 157380 158570 146610 139160 138760 142720 171960 143890 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 240470000 11607 3647 10985 22193;22194;22195 17805;17806;17807 17805 3 9606 Homo sapiens 0.02632069351056998 HAIYDKLDDDGLIAPGVR Unmodified 1967.0112 0.011239973 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 1 6 0 1 53.352 53.429 4 2.1427E-23 15375 20230619_1886_Aki_TMTPro18x_K_F6 199.56 184.14 50709 49844 55050 57513 55717 59957 50685 44808 69568 64688 70411 57462 60695 57728 59248 50288 60218 51618 46981 45672 55573 57482 57698 60124 51991 47387 69822 64140 71679 58667 62218 59130 60273 50777 57548 49045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236480000 11608 2484 10986 22196 17808 17808 1 9606 Homo sapiens 0.06641480301209413 HALDAHQQSIPAVLEIPSK Unmodified 2053.0956 0.095638305 1935 A4D1K0;Q16864;Q16864-2 ATP6V1F V-type proton ATPase subunit F yes no 0 0 0 7.5 0.5 1 1 51.369 51.446 4 0.040269 14200 20230619_1887_Aki_TMTPro18x_K_F7 46.494 33.727 266660 239220 281010 255870 292000 393090 332950 371460 461170 387190 399670 477820 443460 368190 404170 405400 477480 481550 246830 219110 284410 259010 304260 386430 337320 381120 459920 393320 415370 476890 449380 385470 415710 411070 456170 456550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334960000 11609 1935 10987 22197;22198 17809 17809 1 9606 Homo sapiens 0.11121431117999236 HALESWR Unmodified 897.4457 0.4456998 4301 Q92621;B4DE72 NUP205 Nuclear pore complex protein Nup205 yes no 0 0 0 6.5 0.5 1 1 35.83 35.896 3 0.0012065 7955 20230619_1886_Aki_TMTPro18x_K_F6 149.4 91.936 34052 30647 38619 33489 40715 43026 47410 40221 39959 28180 26392 19194 21911 17495 32911 22126 22813 17492 31541 28076 38856 33736 42245 42732 47164 40971 40555 28870 27507 19864 23015 18355 32654 21939 21888 16682 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38299000 11610 4301 10988 22199;22200 17810 17810 1 9606 Homo sapiens -0.007125217310090193 HALFPELPK Unmodified 1050.5862 0.58621603 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 1 0 1 51.548 51.548 3 0.0042187 14980 20230619_1880_Aki_TMTPro18x_K_F1 76.221 66.17 55435 47836 58357 56763 52802 56607 54246 50948 66405 57654 58427 51543 60357 49091 55981 70930 63432 56391 51299 43863 58935 56604 55321 57143 55004 52641 66631 57753 60359 52580 61330 51868 57495 70070 60571 53740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66683000 11611 4372 10989 22201 17811 17811 1 9606 Homo sapiens 0.06294637202563536 HALIIYDDLSK Unmodified 1286.6871 0.68705229 3504 V9HW26;P25705;P25705-2;P25705-3 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 6 1.41 1 1 1 1 1 52.577 52.641 3 7.0115E-07 14969 20230619_1886_Aki_TMTPro18x_K_F6 164.43 142.38 383170 306700 412750 438210 411320 415120 454530 479390 531440 528840 506420 539490 602590 456090 509840 611850 526620 560660 354480 281860 416920 431410 428180 422990 458300 486580 536310 532020 525170 544390 607150 481630 521580 609190 503940 532940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2622800000 11612 3504 10990 22202;22203;22204;22205;22206 17812;17813 17812 2 9606 Homo sapiens 0.05517624394747145 HALLDVTPK Unmodified 992.56548 0.56548059 184 Q9UDY2-7;Q9UDY2;A0A1B0GTW1;Q9UDY2-3;A0A3B3ITE1;A0A024R233;A0A2R8YDH4;A0A3B3IRI3;B7Z954;Q9UDY2-6;A0A3B3ISZ5;A0A024R225;B7Z2R3;A0A3B3IU51;A0A3B3ISF1;A0A3B3IRV6;Q9UDY2-2;Q9UDY2-4;Q9UDY2-5;A0A3B3IS03;A0A3B3IT83 TJP2 Tight junction protein ZO-2 yes no 0 0 0 7.5 0.5 1 1 44.44 44.49 3 0.0007087 11286 20230619_1888_Aki_TMTPro18x_K_F8 105.78 89.153 130710 104540 123140 139860 156540 175890 161620 146830 218650 116610 117450 104740 128330 97967 140370 126160 109510 116400 120790 95999 126350 138750 160220 174420 164270 151240 215180 119360 125700 106750 131140 102820 140740 125830 105120 110640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169530000 11613 184 10991 22207;22208 17814 17814 1 9606 Homo sapiens 0.068900468229117 HALLEADVAAHQDR Unmodified 1544.7696 0.76955314 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 36.462 36.519 3 4.0146999999999996E-22 8183 20230619_1882_Aki_TMTPro18x_K_F3 198.48 177.82 11432 8170.2 12729 12770 11937 13840 11301 10098 18992 14518 19631 16795 19793 15907 13087 16837 18356 18015 10573 7520.1 12810 12524 12463 13822 11671 10702 18915 14525 20084 16929 19873 16492 13737 16961 17510 17100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37562000 11614 1022;3868 10992 22209;22210 17815 17815 1 9606 Homo sapiens 0.018959144555765306 HALPPGFVLK Unmodified 1077.6335 0.63350057 2690 B7Z592;Q8WU90;Q8WU90-2 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes no 0 0 0 3 0 1 49.715 49.79 3 0.011206 14021 20230619_1882_Aki_TMTPro18x_K_F3 74.464 54.135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11615 2690 10993 22211 17816 17816 1 9606 Homo sapiens 0.0977891647355591 HALSYNQR Unmodified 987.48863 0.48862725 1377 C9JMN1;A0A2S1ZR87;A0A2S1ZR79;Q96SB8;Q96SB8-2 SMC6 Structural maintenance of chromosomes protein 6 yes no 0 0 0 8 0 1 28.484 28.51 3 0.0079373 5146 20230619_1888_Aki_TMTPro18x_K_F8 73.248 53.462 9719.7 8555 10159 10778 14786 18602 11086 15311 17713 8262.7 12771 12966 9969.5 12280 12779 7618.1 14186 10844 8995.1 7848.6 10358 10800 14924 18129 11603 15664 17436 8892.3 13217 12926 10427 12426 12992 7932.3 13536 10277 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1940600 11616 1377 10994 22212 17817 17817 1 9606 Homo sapiens -0.005617516735810568 HAMAVYER Oxidation (M) 991.45455 0.45454993 4090 Q68CN2;Q71SV8;Q9HCS7 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 yes no 0 1 0 5 0 1 27.146 27.218 3 0.0020633 4768 20230619_1885_Aki_TMTPro18x_K_F5 101.54 80.64 12423 7410.5 7810 11336 14958 15841 12122 13361 14197 8446.6 8920.1 8702.5 7986.8 8074.9 9057.7 8867.7 10939 8335.8 11433 6824.8 8445.3 11171 14905 15614 12444 13684 14122 8819.5 9361.4 8807.7 8246.4 8385.2 9293.2 8871.1 10430 7932.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11761000 11617 4090 10995 22213 17818 17818 2666 1 9606 Homo sapiens -0.04151916156843072 HAMAVYER Unmodified 975.45964 0.45963531 4090 Q68CN2;Q71SV8;Q9HCS7 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 yes no 0 0 0 5.5 0.5 1 1 31.538 31.595 3 0.0024135 6250 20230619_1885_Aki_TMTPro18x_K_F5 93.162 54.014 18393 13197 18218 17256 25728 26712 20896 23869 27815 21927 22305 23211 22467 18930 24515 18307 23471 22752 16993 12122 18625 17217 25999 26228 21565 24509 27719 22314 23164 23346 23021 19643 24799 18678 22462 21566 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13836000 11618 4090 10995 22214;22215 17819 17819 1 9606 Homo sapiens -0.02907612294222872 HAMNLEAVNTYEGTHDIHALILGR Unmodified 2674.3286 0.32856814 446 Q92947;A0A2L2DH10;A0A2L2DH39;A0A2L2DH25;A0A2L2DH19;A0A2H4G235;A0A2H4G1S8;A0A2H4G0V0;A0A2H4FWZ7;A0A2H4FX81;A0A2H4FX57;A0A2H4FX55;B4DK85;A0A024R7F9;B4DUY0;A0A1L3A5U7;A0A2H4FX70 GCDH Glutaryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 7 0 1 53.369 53.436 5 2.2519E-13 15105 20230619_1887_Aki_TMTPro18x_K_F7 134.81 121.22 24901 19189 22805 24380 24033 29036 23279 23219 34015 27373 27678 25908 30509 26318 27444 30407 35441 30272 23000 17615 23369 24249 24893 28868 23847 24234 33780 27426 28804 26393 30917 27352 28415 30476 33797 28772 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280380000 11619 446 10996 22216 17820 17820 1 9606 Homo sapiens 0.058377000555083214 HANAKPFEVPFLK Unmodified 1496.814 0.81398414 1968 A6NFX8;Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes no 0 0 1 3.5 0.5 1 1 52.791 52.832 4 0.01942 15250 20230619_1883_Aki_TMTPro18x_K_F4 67.997 36.358 119240 102070 129370 118460 120850 129900 130090 127930 107870 122510 125470 99519 88436 63787 134920 75650 78185 65050 110370 93577 130370 118500 126310 130480 130030 130670 111900 123310 126210 100860 93475 67660 132920 75449 75264 61946 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 349040000 11620 1968 10997 22217;22218 17821 17821 1 9606 Homo sapiens 0.08544970339744395 HAPIEQLAR Unmodified 1033.5669 0.56687757 383 P49757-2;A0A024R6C4;B2RCI6;A0A024R681;P49757-4;A0A024R684;A0A024R6F4;P49757-3;P49757;G3V3Z8;P49757-9 NUMB Protein numb homolog yes no 0 0 0 5.5 0.5 1 1 35.141 35.213 3 0.00037284 7715 20230619_1886_Aki_TMTPro18x_K_F6 98.582 74.063 50162 31409 44286 48197 54424 58522 57869 57701 80013 54243 51932 57225 56444 50671 54670 55243 65758 56823 46271 28921 45656 47408 55860 58353 58795 58903 79073 55152 54840 57716 57427 52716 56232 55535 62748 53986 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36778000 11621 383 10998 22219;22220 17822 17822 1 9606 Homo sapiens 0.051436809116466975 HAPLADQILAGNAVR Unmodified 1544.8423 0.84232415 3871 Q13895;F8WBL2 BYSL Bystin yes no 0 0 0 8 0 1 46.806 46.854 3 0.028433 12352 20230619_1888_Aki_TMTPro18x_K_F8 30.584 15.441 75250 51979 75322 69864 74389 83042 77629 80396 105900 80925 80109 82019 89429 71819 76740 91056 82143 86548 69514 47766 76459 69269 77485 82895 78963 82310 105200 81845 83813 82884 90358 75451 78637 90902 78572 82235 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231050000 11622 3871 10999 22221 17823 17823 1 9606 Homo sapiens 0.09169668249023744 HAQPTCPGAQLCTVYYASLNFR Unmodified 2553.1893 0.18929747 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 5.5 0.5 1 1 56.986 57.052 3 3.1729000000000003E-24 16686 20230619_1885_Aki_TMTPro18x_K_F5 192.18 178.02 22203 18518 18330 18837 12286 14190 18628 16271 17638 21187 17912 21089 22511 18032 18745 23260 21274 18921 20503 16959 18854 18953 13419 14762 18388 16625 18059 21135 18590 21297 22645 18976 19291 23037 20314 18025 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 391570000 11623 3606 11000 22222;22223 17824 17824 1 9606 Homo sapiens -0.02516960833554549 HAQTFGAK Unmodified 858.4348 0.43480077 1304 Q15477;A0A8V8TLC0;A0A1U9X8J0;A0A1U9X8J1;A0A1U9X8J2;A0A1U9X8J6;Q96BC0;O76046;Q9NPK3;A0A8V8TL97;H7C4L3;H7C5N0;A0A8V8TLA2;B4E0N1;B4DM01;A0A8V8TN04;A0A1U9X8I7;A0A1U9X8I9;Q59F56;A0A024RCU1;A0A8V8TLR3 SKIV2L;SKI2W Helicase SKI2W yes no 0 0 0 1 0 1 32.968 32.968 3 0.038544 7172 20230619_1880_Aki_TMTPro18x_K_F1 54.712 18.832 23579 12631 25833 26834 35251 36403 32341 32551 34594 22208 34220 33890 26593 22827 28773 19384 32321 30225 21773 11695 26202 26029 35763 35971 32846 33244 35039 23367 34796 33495 27489 23736 29362 20175 30875 28601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14189000 11624 1304 11001 22224 17825 17825 1 9606 Homo sapiens -7.92410529584231E-05 HAVGDDAQFEMDI Oxidation (M) 1462.6035 0.60345859 47 Q6FG68;B2R9B9;A0A024QZM3;Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 yes no 0 1 0 1 0 1 48.152 48.152 2 0.015727 13600 20230619_1880_Aki_TMTPro18x_K_F1 88.177 77.945 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11625 47 11002 22225 17826 17826 22 1 9606 Homo sapiens -0.10933899835254124 HAVGNNEFGTVDHER Unmodified 1680.7604 0.76044502 565 B3KPZ7;A0A024R9C0;B4DYX8;Q6P1N1;Q9P0J1;Q9P0J1-2 PPM2C;PDP1 [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial yes no 0 0 0 2.5 0.5 1 1 31.608 31.679 4 1.5286E-14 6378 20230619_1881_Aki_TMTPro18x_K_F2 190.86 170.43 22580 17455 24437 26951 30857 38449 26146 27560 40113 27248 32098 32137 30993 27767 28554 23099 33666 32270 20886 16058 24785 26561 31475 37731 27065 28895 39713 27744 33255 32239 31567 28546 29328 23823 32153 30558 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 66341000 11626 565 11003 22226;22227 17827;17828 17827 2 9606 Homo sapiens -0.052704789007293584 HAVPSATNLCFDVADAGAATR Unmodified 2143.0117 0.011650679 4366 Q96IR7 HPDL 4-hydroxyphenylpyruvate dioxygenase-like protein yes yes 0 0 0 6.5 0.5 1 1 50.124 50.201 3 4.1913E-30 13990 20230619_1886_Aki_TMTPro18x_K_F6 206.21 190.82 32501 31773 41905 39375 36250 41098 48588 43551 54111 49850 48765 47027 54936 44692 47168 39204 45746 53662 30161 29134 41697 39178 38411 41484 48435 44501 54593 49969 50541 47761 55480 45930 47978 40325 43838 50786 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42934000 11627 4366 11004 22228;22229 17829;17830 17829 2 9606 Homo sapiens -0.014134680412098533 HAVSEGTK Unmodified 827.41373 0.41373097 73;721;4226 U3KQK0;A0A024QZZ7;A0A024RCJ9;A0A024RCL8;B2R4S9;B4DR52;I6L9F7;Q5QNW6-2;Q99879;Q99877;Q5QNW6;P62807;P58876;O60814;Q93079;Q99880;P57053;A8K9J7;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;L0R4T3;A0A2R8Y619 HIST1H2BN;HIST1H2BD;HIST1H2BK;HIST1H2BI;HIST1H2BM;HIST2H2BF;HIST1H2BC;HIST1H2BH;HIST1H2BL;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;ABCF2 Histone H2B;Histone H2B type 2-F;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-H;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B no no 0 0 0 5 0.707 1 2 1 25.679 25.739 3 0.0020942 5071 20230619_1885_Aki_TMTPro18x_K_F5 107.69 75.759 37354 43904 60070 47281 71991 62164 47785 68029 62565 36645 51617 53996 42003 38169 54165 35847 51539 42281 34809 40183 59196 47725 73015 61917 50125 68185 62385 39255 53090 53498 43770 39752 54613 36490 49274 40125 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 217980000 11628 73;721;4226 11005 22230;22231;22232;22233 17831;17832 17832 2 9606 Homo sapiens -0.006879342048023318 HAVTDTEFVNEGK Unmodified 1445.6787 0.67867245 4093 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 3 0 1 41.842 41.904 3 0.00072476 10429 20230619_1882_Aki_TMTPro18x_K_F3 90.434 80.153 51228 40417 44395 34188 56433 50483 55057 52162 71491 58920 61585 77269 74526 61195 59463 75929 76806 73424 47307 36970 45774 35322 57577 49917 56078 53340 71492 59763 64311 77028 74944 64421 61776 75880 73297 69778 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68724000 11629 4093 11006 22234 17833 17833 1 9606 Homo sapiens -0.026339743125618043 HAVTEAEIQQLK Unmodified 1365.7252 0.72522871 4395 Q96SB3;B3KNT0;Q96B17 PPP1R9B Neurabin-2 yes no 0 0 0 5 0 1 45.635 45.712 3 4.8306E-07 11933 20230619_1885_Aki_TMTPro18x_K_F5 152.07 129.19 65642 57343 53449 59925 72390 69163 62476 66125 84863 88135 80587 78878 88188 78146 78177 92150 95069 87144 60629 52517 55614 60450 73416 69229 64261 68323 85092 87626 83195 80469 89330 81366 80677 92062 90743 82852 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125120000 11630 4395 11007 22235 17834 17834 1 9606 Homo sapiens 0.05699510309409561 HAVVNLINYQDDAELATR Unmodified 2041.0229 0.022867292 209 A0A2R8Y804;B4DSW9;A0A2R8Y543;A0A2R8Y5C3;B4DL06;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y7Z0;B5BU28;A0A024R2Q3;A0A2R8Y5A3;P35222 CTNNB1 Catenin beta-1 yes no 0 0 0 4.5 0.5 1 1 52.551 52.6 3 1.5358E-09 14909 20230619_1885_Aki_TMTPro18x_K_F5 130.4 119.13 25708 24050 27746 25817 25849 26392 29500 26091 38157 29104 25896 26300 27621 23842 26192 34618 31259 29595 23809 22026 27973 25954 27087 26655 29788 26767 37875 29190 27226 26755 28084 25239 26985 34307 29848 28169 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 211100000 11631 209 11008 22236;22237 17835 17835 1 9606 Homo sapiens 0.04399677324568074 HAWDHAK Unmodified 863.40383 0.40383499 4722 Q9Y3C1;D6RIC3;A0A0C4DGU5;Q9Y3C1-3;Q9Y3C1-2;B4E098;D6RC60 NOP16 Nucleolar protein 16 yes no 0 0 0 6 0 1 31.02 31.052 3 0.0056045 6155 20230619_1886_Aki_TMTPro18x_K_F6 100.45 86.456 49491 38344 50937 48252 62996 70081 55377 59827 75111 35236 44255 34587 37887 31593 43650 37606 49317 29720 45759 35194 51786 48202 64312 68959 56880 61143 74033 36995 46522 35108 39164 32996 44556 37281 46995 28383 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22809000 11632 4722 11009 22238 17836 17836 1 9606 Homo sapiens -0.03333077419529218 HAYDLIQK Unmodified 986.51853 0.5185304 2546 B4DMP4;Q08AM6;H3BQD9;Q9NW56;Q08AM6-2 VAC14 Protein VAC14 homolog yes no 0 0 0 7 0 1 43.718 43.797 3 0.021304 10816 20230619_1887_Aki_TMTPro18x_K_F7 73.26 24.977 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11633 2546 11010 22239 17837 17837 1 9606 Homo sapiens 0.024731872717666192 HAYFAHAR Unmodified 971.47258 0.47258326 4045 Q8IXG0;Q69YP1;Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 crn;DKFZp762M013;CRNKL1 Crooked neck-like protein 1 yes no 0 0 0 1 0 1 26.216 26.216 3 0.014769 4571 20230619_1880_Aki_TMTPro18x_K_F1 58.782 46.205 3520.1 1683.1 3029.4 2635.2 4216.4 5174.8 4793.3 4915.5 5420.1 2635.5 2752.1 2808.6 2747.3 2317.5 2981 2041.7 4231.6 3403.7 3242.7 1552.5 3135.6 2616.1 4306.6 5029.4 4815 4974.5 5370.5 2795.6 2950.7 2826.7 2818.1 2394.8 3090.3 2135.3 4031 3221.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1036000 11634 4045 11011 22240 17838 17838 1 9606 Homo sapiens -0.014294131198198556 HAYGDQYR Unmodified 1008.4413 0.44134271 274 V9HW78;B2R5M8;A0A024R3Y6;O75874;Q6FIA4;Q6FI37;Q0QER2;C9J4N6 HEL-216;IDH1 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 5 1.87 1 1 1 1 25.318 25.398 3 0.000705 3827 20230619_1883_Aki_TMTPro18x_K_F4 125.81 117.47 423920 403620 433020 444510 492160 487710 445540 491150 597150 486350 608840 531150 481200 514920 501440 405440 607390 570130 392460 369710 439960 446320 505080 490270 456840 501280 599660 493410 617970 536680 496920 525690 514830 418810 579860 539910 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 415080000 11635 274 11012 22241;22242;22243;22244 17839;17840;17841;17842 17840 4 9606 Homo sapiens -0.06254030944569422 HAYYVTVEAAPYWLHK Unmodified 1946.9679 0.9679186 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;Q86SE4 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 3 0 1 54.962 55.009 4 4.3224E-08 16397 20230619_1882_Aki_TMTPro18x_K_F3 132.86 121.38 32421 28112 37980 33602 31151 38784 38017 32109 47999 34976 40328 45994 56592 41760 43165 52816 50446 62992 30033 25779 37996 33562 33114 38666 38236 33368 47990 35571 42478 46064 56570 43841 44587 53430 48283 59676 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24938000 11636 2005 11013 22245 17843 17843 1 9606 Homo sapiens 0.03231335314626449 HCCGVAQMR Unmodified 1117.4579 0.45793752 2670 B7SBB1;O00170;D0EKE4;A5JGZ4;A0A804HKH9;D0EKE6;D5LTB3;C8CK04;C8CHN4;C0JXB8;D0EKE5;C0JXB9;C8CK05;A0A804HJ38;A0A804HIX8;D2CVN5;V9GYQ3;A0A804HKK3;A0A804HKL7;A0A804HKP8;A7KS92 AIP AH receptor-interacting protein yes no 0 0 0 7 0.816 1 1 1 25.89 25.945 3 4.1137E-05 4874 20230619_1886_Aki_TMTPro18x_K_F6 122.18 69.01 66946 44123 72629 80570 93621 84100 88312 86684 99088 67136 93505 92329 74363 70812 85773 68920 88792 74082 61871 40714 73651 78358 95274 84822 89675 87887 99964 69701 95377 91869 77099 73600 87086 69652 84824 70363 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 117390000 11637 2670 11014 22246;22247;22248 17844;17845;17846 17844 3 9606 Homo sapiens -0.09609312646125545 HCCPAGFR Unmodified 1003.4116 0.41163926 2502 B4DJI2;P28799;K7EQ05;B4E1G5;P28799-3;P28799-2 GRN Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 yes no 0 0 0 6.5 1.12 1 1 1 1 27.105 27.162 3 0.00078927 5253 20230619_1886_Aki_TMTPro18x_K_F6 121.29 95.733 52112 41644 56981 56251 60496 61986 65420 65904 77263 49330 78125 74681 65841 68567 56707 57041 76684 63023 48217 38247 57526 55689 62649 62332 66050 66627 77917 51564 79536 74489 67253 70246 58922 57864 73083 59846 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 152430000 11638 2502 11015 22249;22250;22251;22252 17847;17848;17849 17847 3 9606 Homo sapiens -0.08993009485914172 HCDDSFTPQEK Unmodified 1362.551 0.55102909 3557 P36551 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 0 0 0 3 0 1 37.278 37.331 3 0.0021518 8503 20230619_1882_Aki_TMTPro18x_K_F3 91.549 85.826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11639 3557 11016 22253 17850 17850 1 9606 Homo sapiens -0.11574438178240598 HCDGGGAQSR Unmodified 1043.4203 0.42028969 4806 yes yes 0 0 0 2.67 0.471 1 2 34.057 34.12 3 0.0023697 7208 20230619_1882_Aki_TMTPro18x_K_F3 68.557 44.403 + 214520 187580 204060 206820 233040 253020 250750 248840 283200 300370 262530 255310 277600 227690 214040 260390 274590 246880 198370 171870 208630 207990 240240 252330 252780 255780 286080 299400 270870 260180 279820 237590 222350 260280 261950 234730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 320850000 11640 4806 11017 22254;22255;22256 17851 17851 1 9606 Homo sapiens -0.0996836431572774 HCDLQVR Unmodified 926.43923 0.43923422 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 4 0.816 1 1 1 28.793 28.879 3 0.0019827 5331 20230619_1885_Aki_TMTPro18x_K_F5 128.48 51.638 21376 15853 18131 20749 20924 22698 23626 23041 24266 19963 24163 21948 22196 20132 19133 20230 27354 20772 19729 14559 18748 20575 21586 22810 23682 23436 24659 20407 24693 22140 22587 20825 19966 20359 26047 19748 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285650000 11641 3152 11018 22257;22258;22259 17852 17852 1 9606 Homo sapiens -0.02692782954022732 HCDNLLR Unmodified 926.43923 0.43923422 1938 A4D1U5;Q53H12;E9PG39;B4DR72;A0A3B3ISZ0;A0A3B3IS09;A0A3B3ITX7;A0A3B3IRM6;Q53H12-2 FLJ10842;AGK Acylglycerol kinase, mitochondrial yes no 0 0 0 4.5 1.12 1 1 1 1 30.398 30.463 3 0.0003343 5996 20230619_1885_Aki_TMTPro18x_K_F5 170.73 72.593 117540 84383 107330 110040 140690 135580 145240 142620 178760 125730 113950 113820 146240 120290 92986 138140 164580 154550 108530 77504 110390 109370 143530 135350 147120 144720 177540 127730 121310 116360 145780 124890 99679 139300 156710 146650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 174030000 11642 1938 11019 22260;22261;22262;22263 17853;17854;17855 17854 3 9606 Homo sapiens -0.026927829540113635 HCECSTDEVNSEDMDAYCR Oxidation (M) 2392.8301 0.83005878 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348 ITGB1 Integrin beta-1;Integrin beta yes no 0 1 0 1 0 1 33.721 33.721 3 3.2449E-07 7500 20230619_1880_Aki_TMTPro18x_K_F1 99.435 95.941 5315.2 2944.9 3274.7 6166.1 5846.5 5109.4 6180 5024.3 6237 6643.1 6434.9 5964.4 6727.2 5338.9 5809.6 6530.7 5768.7 7354.8 4889.3 2725.6 3552 5937.7 5871.3 5243.7 6206.8 5187.9 6362.8 6606.2 6602.4 6064.8 6809.4 5595.3 5926.2 6587.1 5530.8 6971.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78814000 11643 1647 11020 22264 17856 17856 1071 1 9606 Homo sapiens -0.3106430497373367 HCECSTDEVNSEDMDAYCR Unmodified 2376.8351 0.83514416 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 0 1.5 0.5 1 1 38.445 38.445 3 5.8081E-61 9399 20230619_1880_Aki_TMTPro18x_K_F1 309.56 307.99 13961 10482 12404 13816 11704 17343 13994 10613 17813 19022 16859 21869 17789 18005 14192 22138 19957 21864 12891 9627 12734 13715 12320 17104 14087 11545 17906 18869 17412 21918 17982 18902 14858 22142 19053 20762 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107300000 11644 1647 11020 22265;22266 17857;17858 17857 2 9606 Homo sapiens -0.29820001111147576 HCEDGICTVTAGPK Unmodified 1543.6759 0.67591203 1551 A0A494C157;A0A494C1E9;D6RH30;P19838;P19838-2;D6RC45 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes no 0 0 0 4 0 1 39.735 39.777 3 4.334E-05 9451 20230619_1883_Aki_TMTPro18x_K_F4 102.73 90.816 29907 34086 29816 30958 24296 29557 32095 30045 30238 34359 34941 32964 43404 35826 32594 38690 42978 38574 27721 31157 30224 31535 25892 30029 31862 30788 31121 34449 35980 33639 43515 37022 33937 38813 40990 36655 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29099000 11645 1551 11021 22267 17859 17859 1 9606 Homo sapiens -0.07417889033331448 HCFTSNEAAR Unmodified 1191.5091 0.5091047 196 H7C0R6;H7C3J3;A0A024R2D3;Q9BV44 THUMPD3 THUMP domain-containing protein 3 yes no 0 0 0 4.5 0.5 1 1 25.48 25.549 3 0.0013761 4940 20230619_1885_Aki_TMTPro18x_K_F5 73.841 67.806 18599 10436 19946 18717 26934 26107 23837 22808 27389 21951 26619 27542 23501 22830 23222 17980 24849 22312 17174 9635 20244 18307 27310 25758 24321 23505 27652 22412 27218 27528 24089 23438 23678 18414 23742 21156 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36596000 11646 196 11022 22268;22269 17860;17861 17861 2 9606 Homo sapiens -0.07898949076093231 HCLLTCEECK Unmodified 1348.5574 0.5573768 4015 Q56VL3 OCIAD2 OCIA domain-containing protein 2 yes yes 0 0 0 4 0 1 39.443 39.486 3 0.00013237 9307 20230619_1883_Aki_TMTPro18x_K_F4 107.15 75.969 85207 78833 94090 69444 115720 94395 101750 92298 109460 98311 92627 86733 120930 87013 69770 122450 105760 66788 78921 72088 94973 71363 117810 93670 103630 94577 110470 98720 96967 88672 120020 91608 74109 119230 100570 64168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191350000 11647 4015 11023 22270 17862 17862 1 9606 Homo sapiens -0.10295959542713717 HCNMVLENVK Oxidation (M) 1258.5798 0.5798268 3719 P62316;P62316-2 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 0 1 0 6.5 0.5 2 2 38.636 38.707 3 0.00015991 8802 20230619_1886_Aki_TMTPro18x_K_F6 118.03 94.429 194990 168120 176660 184090 249060 280070 221140 214420 304840 109310 123090 112440 103440 85904 139560 122020 130340 99204 180220 154040 182120 185850 252460 274410 226980 220760 297940 116640 133970 113280 108000 91362 140660 120830 124580 94580 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 471340000 11648 3719 11024 22271;22272;22273;22274 17863;17864;17865 17863 2401 3 9606 Homo sapiens -0.03911992082817051 HCNMVLENVK Unmodified 1242.5849 0.58491218 3719 P62316;P62316-2 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 0 0 0 7 0.816 1 1 1 42.107 42.164 3 5.1815E-14 10127 20230619_1887_Aki_TMTPro18x_K_F7 192.12 168.88 242640 197300 208790 221130 257310 335800 259500 242040 354530 130640 121060 112920 124490 104120 172340 134440 142990 99309 224100 180860 215790 222830 264160 328570 264190 250780 345800 138010 135400 115290 129310 109260 172560 132790 136800 94856 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 535440000 11649 3719 11024 22275;22276;22277 17866;17867;17868 17867 3 9606 Homo sapiens -0.026676882201854824 HCPGGEGMFR Oxidation (M) 1162.4648 0.46479704 2945 E9PS41;Q6RFH5;Q6RFH5-2;B4E018 WDR74 WD repeat-containing protein 74 yes no 0 1 0 4 0 1 28.095 28.168 3 0.022122 4983 20230619_1883_Aki_TMTPro18x_K_F4 56.548 44.334 3705.6 2790.6 5451.7 6411.4 5783.2 5748.3 5487 5855.6 8093.4 6873.2 6991.6 6921.3 6150.1 4358.1 4158.4 5607.3 8110.4 5131.3 3438.1 2583.3 5402.6 6160.6 5967.7 5861.1 5631.3 6002.9 8050.6 6893.7 7182.8 6933.2 6207.7 4649.1 4488.3 5584.5 7701.1 4889.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5835500 11650 2945 11025 22278 17869 17869 1750 1 9606 Homo sapiens -0.10993676493922067 HCPYINTR Unmodified 1059.492 0.49199807 4087 Q68CP0;Q63HJ5;Q96JM2;Q96JM2-3;H3BLX4;Q96JM2-2 DKFZp686B2325;DKFZp686L2367;ZNF462 Zinc finger protein 462 yes no 0 0 0 8 0 1 30.293 30.308 3 0.0054345 5737 20230619_1888_Aki_TMTPro18x_K_F8 89.698 67.612 12537 9658.1 12601 11899 15388 15692 14697 14958 16110 11225 14386 14998 14140 13116 13478 13667 19459 15262 11588 8863 12832 11885 15734 15564 14903 15230 16246 11668 14836 14995 14424 13615 14045 13816 18531 14495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9442200 11651 4087 11026 22279 17870 17870 1 9606 Homo sapiens -0.03536824891193646 HCPYLDTINR Unmodified 1287.603 0.60300508 2722 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;Q53GS9-3;F8WC91;C9JIU2 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 0 0 0 7 0 1 39.204 39.268 3 6.8852E-05 8933 20230619_1887_Aki_TMTPro18x_K_F7 135.63 116.67 105130 80774 94704 97273 104790 121530 118030 112780 147980 108340 118320 113500 119800 105470 105640 126310 126920 119650 97091 74108 97256 97209 108520 120840 119110 115700 147730 109990 122810 114780 121610 110130 108960 126170 121180 113740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144320000 11652 2722 11027 22280 17871;17872 17871 2 9606 Homo sapiens -0.02929229973801739 HCQLLETPESWAK Unmodified 1597.7559 0.75587691 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPW9;A0A8V8TPX4;A0A8V8TRC7;H7C3P6;A0A8V8TQG1 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 6.5 0.5 1 1 50.845 50.922 3 4.1353E-06 14285 20230619_1886_Aki_TMTPro18x_K_F6 129.54 101.25 101940 86866 93631 102690 98150 104540 103600 104110 119530 119480 107730 108280 128020 101740 100020 129740 119710 117910 94221 79652 95920 102450 101740 105590 104640 106800 120480 119590 111960 110230 128660 106680 103450 129180 114330 112130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143330000 11653 1852 11028 22281;22282 17873;17874 17873 2 9606 Homo sapiens -0.019090793678515183 HCQTFCM Oxidation (M) 998.34084 0.34084208 2710 Q8TEQ6;B7ZLC9 GEMIN5 Gem-associated protein 5 yes no 0 1 0 4 0 1 31.77 31.831 2 0.092452 6251 20230619_1883_Aki_TMTPro18x_K_F4 67.377 66.281 5397.3 3758.3 5468.7 8069.5 7440.5 11978 8937.3 9504.1 11204 4411 5132.2 3546.6 4362.6 3980.6 4864.5 4133.4 6236.5 4131.9 4986.6 3476 5602.1 7830.7 7644.9 11737 8986.3 9740.4 11018 4720.2 5508.2 3665.1 4507.7 4099.8 5008.3 4154.1 5939.2 3932.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6349500 11654 2710 11029 22283 17875 17875 1627 1 9606 Homo sapiens -0.1583947058575177 HDAATCFVDAGNAFK Unmodified 1622.7147 0.71474038 109 A0A024R0R9;P54920;M0R2M1;M0R058;M0R0I4 NAPA Alpha-soluble NSF attachment protein yes no 0 0 0 6.5 0.5 1 1 50.751 50.829 3 9.7759E-11 14273 20230619_1886_Aki_TMTPro18x_K_F6 157.86 145.24 159400 123870 123920 149770 138830 153680 161080 157960 174500 176420 156970 162020 185600 151940 150240 191390 219750 196660 147070 113640 129230 149170 143710 155220 161500 161570 176430 176860 163150 164790 186890 159210 157440 191860 209420 186820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 264410000 11655 109 11030 22284;22285 17876;17877 17876 2 9606 Homo sapiens -0.07170840407343348 HDADGQATLLNLLLR Unmodified 1648.8897 0.88966827 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O43242-2 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 8 0 1 62.389 62.414 3 4.5827999999999996E-52 18826 20230619_1888_Aki_TMTPro18x_K_F8 293.8 276.91 83067 61675 68338 74168 72200 76470 75901 77934 74744 88512 85601 82262 97293 80260 74447 110710 86178 93627 76652 56593 70729 73918 74785 77205 76314 79791 76738 88667 87789 83791 97826 84459 76959 109690 82392 89081 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 538030000 11656 2361 11031 22286 17878 17878 1 9606 Homo sapiens 0.091179027293947 HDCFLAHK Unmodified 1026.4705 0.47053435 2799 CON__Q3SZ57 yes yes 0 0 0 7 0 1 35.588 35.659 4 0.012923 7588 20230619_1887_Aki_TMTPro18x_K_F7 82.452 70.605 + 9473.9 15244 23061 10856 65517 73840 37267 26974 62557 13379 17844 21921 11649 13114 12839 20279 28388 45841 8917.1 13901 22869 12135 63964 68808 39902 30405 60379 14664 20160 21578 12212 14222 13941 21650 27132 43205 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13677000 11657 2799 11032 22287 17879 17879 1 -0.041642099199634686 HDDYLVMLK Oxidation (M) 1148.5536 0.55359527 4012 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 C14orf166 UPF0568 protein C14orf166 yes no 0 1 0 5.5 0.5 1 1 48.194 48.272 3 0.039172 12994 20230619_1885_Aki_TMTPro18x_K_F5 47.261 28.949 102390 84232 102750 102390 110760 124170 110810 109380 120760 123190 124160 116020 124090 104770 122760 120290 116340 124610 94687 77268 104460 102210 114430 123570 112060 113120 122650 123550 127190 117740 126560 109290 124490 120890 111430 118280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143070000 11658 4012 11033 22288;22289 17880 17880 2651 1 9606 Homo sapiens -0.01473937982609641 HDDYLVMLK Unmodified 1132.5587 0.55868065 4012 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 C14orf166 UPF0568 protein C14orf166 yes no 0 0 0 6.5 0.5 1 1 52.834 52.908 3 0.0023535 15165 20230619_1886_Aki_TMTPro18x_K_F6 88.177 50.455 122960 89496 120210 127300 100570 142090 138250 127180 161360 143500 139650 138710 162460 139390 141720 164680 160600 158840 113590 82275 122140 125600 107300 142090 137900 131430 162170 144090 145290 141100 164130 145100 145640 164690 153470 150930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 387090000 11659 4012 11033 22290;22291 17881;17882 17881 2 9606 Homo sapiens -0.002296341199780727 HDGEDVLGNKVER Unmodified 1466.7114 0.71136956 3879 Q14191;A0A494C0Y6 WRN Werner syndrome ATP-dependent helicase yes no 0 0 1 3 0 1 38.115 38.169 4 0.0771 8874 20230619_1882_Aki_TMTPro18x_K_F3 49.482 44.915 16228 12025 16485 16389 23375 22158 18089 20568 26184 18402 25801 22662 18562 18685 23551 17299 21827 17322 14999 11049 16821 16266 23579 21936 18801 21053 26164 18859 26156 22687 19427 19313 23729 17434 20869 16469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28298000 11660 3879 11034 22292 17883 17883 1 9606 Homo sapiens -0.003317671896866159 HDGITVAVHK Unmodified 1075.5774 0.57744226 3258 O43504;R4GMU8;E9PLX3;A0A8Z5A536 LAMTOR5 Ragulator complex protein LAMTOR5 yes no 0 0 0 7 0.707 1 2 1 36.935 36.982 4 4.8812E-07 7926 20230619_1887_Aki_TMTPro18x_K_F7 156.48 138.17 267010 198260 226020 259070 296010 307210 308090 291410 384800 322120 363920 342320 372220 316250 281820 378170 399680 335410 246440 182080 234270 257200 302300 306660 312160 299640 386630 324700 374440 345910 375450 330270 295180 376390 380830 319260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 445870000 11661 3258 11035 22293;22294;22295;22296 17884;17885;17886 17885 3 9606 Homo sapiens 0.04267663566088231 HDIAFVEFDNEVQAGAAR Unmodified 1987.9388 0.93880331 2252 B2R802;P09012;M0R268;B4DDC7 SNRPA U1 small nuclear ribonucleoprotein A yes no 0 0 0 2.5 0.5 1 1 53.574 53.602 3 1.1783999999999999E-22 15759 20230619_1882_Aki_TMTPro18x_K_F3 187.78 179.6 20540 17535 21242 22186 19576 21142 22878 20511 24615 24628 29153 25595 28454 22640 28818 27878 29550 28260 19003 16089 21500 22010 20546 21447 22934 21121 25153 24700 29648 25858 29066 23736 29332 27956 28258 26842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141220000 11662 2252 11036 22297;22298 17887;17888 17888 2 9606 Homo sapiens -0.01564853772333663 HDIAFVEFENDGQAGAAR Unmodified 1945.8919 0.89185312 3412 P08579;B5BTZ8 SNRPB2 U2 small nuclear ribonucleoprotein B'' yes no 0 0 0 3 0.816 1 1 1 49.682 49.738 3 1.7443E-38 13998 20230619_1882_Aki_TMTPro18x_K_F3 185.14 169 184730 161300 177440 189600 167320 215090 210780 213320 224100 226170 233390 216000 251890 213750 233010 255640 242480 246520 170830 147890 180840 189520 176000 215470 210450 218350 227950 227580 239740 219800 255590 222790 237920 255660 231940 234230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1095800000 11663 3412 11037 22299;22300;22301 17889;17890 17890 2 9606 Homo sapiens -0.04325713323464697 HDLDIIK Unmodified 852.47052 0.47051757 3281 O60518 RANBP6 Ran-binding protein 6 yes yes 0 0 0 5 0 1 44.676 44.755 3 0.043707 11530 20230619_1885_Aki_TMTPro18x_K_F5 63.486 18.174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11664 3281 11038 22302 17891 17891 1 9606 Homo sapiens 0.038381133517077615 HDLDLICR Unmodified 1040.5073 0.50731378 3705;3704;685 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;B4DJ75;B7ZB67;P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;E9PMD7;B3KXM2;P62136-3;A0A024RBP2;F8W0W8;P36873;P36873-2;Q9UPN1;F8VYE8;F8VR82;B4DNE3 HEL-S-80p;PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 4 0 1 41.664 41.707 3 1.9949E-07 10261 20230619_1883_Aki_TMTPro18x_K_F4 205.7 185.94 166130 137990 152190 174460 151900 196120 172550 188430 216570 213660 185930 178660 246280 184600 179580 232910 206320 197050 153530 126630 155930 173450 158690 196410 174170 193630 217060 213560 194730 183230 246120 192880 185540 231120 197080 187580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 897400000 11665 3705;3704;685 11039 22303 17892 17892 1 9606 Homo sapiens -0.011319580940380547 HDLPLHPAVVK Unmodified 1224.6979 0.69789175 4627 Q9NY93-2;Q9NY93;Q53HB9;H7BZN7 DDX56 Probable ATP-dependent RNA helicase DDX56 yes no 0 0 0 8 0 1 41.06 41.052 4 0.04561 9980 20230619_1888_Aki_TMTPro18x_K_F8 40.616 24.735 13313 10679 12306 12279 12519 18043 12524 12848 20854 17993 23887 34167 24242 19260 29065 21334 28827 33021 12301 9791.8 12591 12343 13040 17680 12889 13627 20877 18402 24459 33399 24949 20478 29414 22082 27613 31224 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56480000 11666 4627 11040 22304 17893 17893 1 9606 Homo sapiens 0.0945307155966475 HDLPPYR Unmodified 896.45045 0.45045083 2414 B3KTJ9;Q8N163-2;Q8N163;E5RHJ4 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 4 0 1 33.218 33.275 3 0.013464 6858 20230619_1883_Aki_TMTPro18x_K_F4 87.284 26.161 111980 67527 94922 57819 74892 71939 124640 118860 120300 86312 87137 94499 78457 110340 64986 60075 95873 71982 103240 61847 97336 59592 80615 72814 122610 117260 121320 89254 90636 96010 80050 110450 67982 61918 91267 68330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12937000 11667 2414 11041 22305 17894;17895 17895 2 9606 Homo sapiens -0.0019163758825015975 HDNLLHGTK Unmodified 1033.5305 0.53049207 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46;Q7Z6P5 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 6.67 0.471 1 2 32.696 32.766 3;4 4.4139E-05 6410 20230619_1887_Aki_TMTPro18x_K_F7 154.84 123.77 130010 82676 115370 125050 130310 139190 119400 99570 158810 153540 173620 160750 160610 144930 111250 141570 167180 154560 119940 76107 118680 122900 133950 138760 122230 105990 160130 152590 176680 162280 162070 149830 117240 142980 159330 146710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 188350000 11668 1104 11042 22306;22307;22308 17896;17897;17898 17897 3 9606 Homo sapiens 0.01506804014957197 HDNLLHGTKK Unmodified 1161.6255 0.62545508 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46;Q7Z6P5 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 1 1 0 1 33.172 33.172 5 0.043994 7272 20230619_1880_Aki_TMTPro18x_K_F1 45.879 22.643 23213 17680 22877 18330 25707 23702 22154 24059 26844 23107 29584 29754 24474 20614 22013 21889 29272 22155 21453 16200 23273 18552 26354 23589 22705 24519 27172 23603 29995 29586 25027 21626 22825 21998 27888 21066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6719600 11669 1104 11043 22309 17899 17899 1 9606 Homo sapiens 0.051107374861203425 HDPSRPYAEQYR Unmodified 1517.7011 0.70113922 3130 J3KQ40;O95759-2;O95759 TBC1D8 TBC1 domain family member 8 yes no 0 0 1 5 0 1 29.394 29.468 4 0.00034363 5514 20230619_1885_Aki_TMTPro18x_K_F5 105.65 97.476 9264.8 7044.7 9333.8 9919.6 14080 10813 11568 12739 13650 9615.2 12468 11633 13359 11564 11799 10613 15893 12841 8563.6 6474.4 9544.9 9793.4 14147 10919 11874 12793 13729 9951.9 12881 11723 13538 11883 12243 10811 15145 12184 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6230300 11670 3130 11044 22310 17900 17900 1 9606 Homo sapiens -0.03700330124274842 HDVGAYMLMYK Oxidation (M) 1342.605 0.60497892 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 1 0 1 51.116 51.116 3 0.0013571 14783 20230619_1880_Aki_TMTPro18x_K_F1 83.397 69.239 87472 82966 97180 91731 93032 93947 102300 96571 90221 86148 102530 75792 88215 70111 95289 91332 89908 81446 81037 76000 97806 92008 97060 94945 102280 98219 93050 87297 103850 77358 90770 73652 96452 90905 86017 77493 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84907000 11671 3758 11045 22311 17901 17901 2437 1 9606 Homo sapiens -0.05261937280215534 HDVMAHVHTFGHCCPK Oxidation (M) 1947.8291 0.8290754 914 P30566;A0A7P0T9A7;A0A7P0Z472;A0A096LNY6;X5D8S6;A0A1B0GTJ7;A0A1B0GWJ0;B4DP46;A0A0A6YY92;Q71UA4;A0A7P0T8E4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;X5D2Z4;X5DP48;P30566-2;A8K4X6;A0A096LP92;A0A096LNY4;A0A096LP72;B4DEP1 ADSL Adenylosuccinate lyase yes no 0 1 0 8 0 1 31.552 31.562 5 1.6891E-06 6175 20230619_1888_Aki_TMTPro18x_K_F8 117 107.83 19953 12673 20053 17784 20616 20627 19392 16704 21093 18426 15619 12822 19518 13996 14410 19243 17776 15378 18425 11656 20352 17576 21320 20555 19676 17388 21184 18373 16431 13325 19541 14689 14954 19023 16959 14656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15515000 11672 914 11046 22312 17902 17902 523 1 9606 Homo sapiens -0.10692597188517539 HDVTCTVSGGGR Unmodified 1244.5568 0.55678317 3765 Q86WV4;P82933 MRPS9 28S ribosomal protein S9, mitochondrial yes no 0 0 0 5 0 1 28.565 28.639 3 8.4418E-18 5194 20230619_1885_Aki_TMTPro18x_K_F5 188.27 163.76 3418.9 1425.1 5419.7 5076.1 7325.6 5112.3 5591.1 5568 6996.1 5052.6 7176 7304.1 5218.9 5505.7 5485.7 4888.9 9204.6 9006.4 3167 1337 5361.7 4820.9 7384.6 5177.8 5782.8 5644.9 7046.1 5204.5 7268.8 7249.8 5413.1 5706.4 5774.9 5154.4 8769.5 8511.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24985000 11673 3765 11047 22313 17903 17903 1 9606 Homo sapiens -0.055712948758809944 HDVVFLITK Unmodified 1070.6124 0.61243078 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1.5 0.5 1 1 53.424 53.438 3 2.0258E-06 15728 20230619_1880_Aki_TMTPro18x_K_F1 179.51 137.17 576320 453730 514350 529020 459430 495650 556260 523010 642660 623550 595520 511500 637280 497040 594690 600830 513620 551800 532300 416120 526890 527840 484300 504540 557940 535220 648040 621470 614520 524080 646610 518960 601050 599420 492470 524480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1426800000 11674 826 11048 22314;22315 17904;17905 17904 2 9606 Homo sapiens 0.07994906374028687 HDWDYCEHR Unmodified 1316.4993 0.49926829 3464 P17568 NDUFB7 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 yes yes 0 0 0 2 0.816 1 1 1 31.695 31.742 4 4.5933E-06 6382 20230619_1881_Aki_TMTPro18x_K_F2 153.05 140.47 27185 21790 26160 28688 34293 32125 20749 19725 63819 32433 46170 28981 38794 28905 23987 35532 28656 22774 25126 20007 26777 28431 34671 31960 23018 21359 61746 32098 47704 29644 39100 30170 24975 34860 27332 21788 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48452000 11675 3464 11049 22316;22317;22318 17906 17906 1 9606 Homo sapiens -0.14632137081480323 HEAFFIR Unmodified 918.47119 0.47118627 788 A8K097;A0A024RE04;Q5JVF3-3;Q5JVF3-2;Q5JVF3;Q5JVF3-4;A0A024RDZ9 RP11-98F14.6;PCID2 PCI domain-containing protein 2 yes no 0 0 0 7.5 0.5 1 1 41.342 41.339 3 2.4866E-05 9804 20230619_1887_Aki_TMTPro18x_K_F7 138.85 90.675 38380 30154 30911 31991 31634 33021 32594 31505 35885 38284 31929 29905 38632 33412 25726 49102 41344 37042 35423 27631 32033 32187 32834 33300 32915 32472 36255 38079 33211 30893 38628 35167 27378 48343 39377 35326 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33682000 11676 788 11050 22319;22320 17907;17908 17907 2 9606 Homo sapiens 0.008689527914157225 HEANNPQLK Unmodified 1049.5254 0.52540669 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;F5H783;F5GXD8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 5 0.816 1 1 1 31.769 31.827 3 2.037E-05 6324 20230619_1885_Aki_TMTPro18x_K_F5 160.16 122.61 110630 73789 160700 152000 185600 217400 149270 185840 151370 120730 206590 221280 140780 156560 218460 58177 216690 187950 102560 68213 159400 147790 189780 213930 152910 190210 156040 128550 206730 217640 149670 158380 219760 67863 207140 177250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 280130000 11677 2088 11051 22321;22322;22323 17909;17910 17910 2 9606 Homo sapiens 0.0026250015230289137 HEAPMQMASAQDAR Unmodified 1541.6715 0.67149535 4338 Q96E17 RAB3C Ras-related protein Rab-3C yes yes 0 0 0 3.5 0.5 1 1 34.019 34.078 3 0.00049046 7228 20230619_1882_Aki_TMTPro18x_K_F3 89.624 80.087 17304 12819 13206 12617 14837 17013 15699 16743 15231 20542 22567 22518 20259 20144 20180 21773 25410 20709 15960 11742 13778 12828 15318 16869 15774 17214 15853 20604 22709 22687 20768 20926 20817 21794 24229 19698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35683000 11678 4338 11052 22324;22325 17911 17911 1 9606 Homo sapiens -0.0776735345623365 HEAQLSTDYK Unmodified 1190.5568 0.5567664 827 A0A087WW06;Q96AY4 TTC28 Tetratricopeptide repeat protein 28 yes no 0 0 0 3.5 0.5 1 1 37.564 37.613 3 0.033147 8517 20230619_1883_Aki_TMTPro18x_K_F4 44.847 30.157 37368 26842 40336 38528 43313 43143 39834 43403 52291 41759 61872 54083 53217 43270 53886 43991 61687 57037 34550 24681 40752 38009 44636 43283 40781 44274 52877 42680 62595 54010 54605 45050 55155 44959 58914 54053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183470000 11679 827 11053 22326;22327 17912 17912 1 9606 Homo sapiens -0.03088971604256585 HEASDFPCR Unmodified 1117.4611 0.46109187 2028 P18031;A8K3M3 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type yes no 0 0 0 2.5 0.5 1 1 30.957 31.033 3 1.5838E-06 6101 20230619_1881_Aki_TMTPro18x_K_F2 182.76 161.86 51125 40974 54203 51102 65185 60134 58758 64724 63461 52050 66362 63163 62138 50747 58063 60162 70940 57284 47292 37599 54934 50915 66563 60253 59794 65444 64457 53618 67745 63236 63355 53247 59830 60147 67656 54489 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73350000 11680 2028 11054 22328;22329 17913;17914 17913 2 9606 Homo sapiens -0.09294022996141393 HECGAAFTSK Unmodified 1106.4815 0.48149296 1592;3864 Q13620-3;A0A7P0T954;Q13620;Q13620-1;K4DI93;A0A669KAX4;A0A7P0TAQ3;A0A7P0T9L3;A0A7P0T8P8;A0A7P0T9C8;A0A804CL36;A0A7P0T9D0;A0A669KBG9;A0A7P0T9P5;Q13619;B2RBV7;A0A0A0MR50;Q13619-2;B4DKT2 CUL4B;CUL4A Cullin-4B;Cullin-4A no no 0 0 0 5.5 0.5 1 1 35.089 35.16 3 0.00038614 7698 20230619_1886_Aki_TMTPro18x_K_F6 108.31 98.47 86053 53633 89045 93717 91207 94178 85170 83370 119950 104590 93439 124450 127780 111910 76362 97909 157590 126950 79475 49470 90245 91288 94410 94919 87308 86528 119220 105230 98758 124830 127010 115130 83128 100190 149790 120380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113960000 11681 1592;3864 11055 22330;22331 17915 17915 1 9606 Homo sapiens -0.06748852336318123 HECMAPLTALVK Unmodified 1368.6894 0.68937725 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 1 0 1 51.901 51.901 3 0.00014742 15121 20230619_1880_Aki_TMTPro18x_K_F1 104.87 88.977 52259 38879 45340 50388 40388 58459 52998 49095 55986 55077 46855 47414 61563 50395 48174 58385 49792 58453 48242 35702 46610 50031 42804 58245 52790 50972 56535 55131 49148 48584 61716 52330 49370 58518 47685 55486 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138700000 11682 3758 11056 22332 17916 17916 1 9606 Homo sapiens 0.01978013536495382 HECPFGR Unmodified 901.38647 0.38647037 1941 Q92556;A4D1X5;B4DJV6;Q92556-3;B4DZ20;Q96JJ3;Q96JJ3-3;B4DRL5;Q5JVZ5;H7C0S6;B7Z1S8;H0YCM7;Q5JVZ8 ELMO1;ELMO2 Engulfment and cell motility protein 1;Engulfment and cell motility protein 2 yes no 0 0 0 4.5 0.5 1 1 29.765 29.837 3 0.005004 5480 20230619_1883_Aki_TMTPro18x_K_F4 108.24 97.365 35527 30383 40983 37060 47822 49300 40652 51420 64489 50986 60736 62702 73543 59642 48215 104730 98274 92714 32902 27868 41249 37058 48945 48977 42171 52326 64168 51938 63022 63150 73501 63993 52548 103650 93505 88208 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27801000 11683 1941 11057 22333;22334 17917;17918 17917 2 9606 Homo sapiens -0.06816741016837113 HECQANGPEDLNR Unmodified 1538.6532 0.65320275 3684 V9HWA6;P60981;P60981-2;B7Z9M9 HEL32;DSTN Destrin yes no 0 0 0 2 0.816 1 1 1 29.104 29.162 3 1.5646E-15 5668 20230619_1880_Aki_TMTPro18x_K_F1 198.37 178.28 16819 9999.2 16333 16424 19615 19978 20192 22663 27169 23448 23261 22935 25796 22675 20846 24077 22591 23623 15521 9217.5 16682 16102 20128 19986 20542 22971 27124 23647 24152 23298 26018 23470 21399 24141 21606 22439 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 603820000 11684 3684 11058 22335;22336;22337 17919;17920 17919 2 9606 Homo sapiens -0.09457772106588891 HEDMTLLVR Unmodified 1112.5648 0.56482866 4025 Q59FT7;B7Z9N9;B7Z3S5;A8K6K3;Q15750-2;Q15750 MAP3K7IP1;TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes no 0 0 0 4 0 1 42.969 43.013 3 1.4746E-08 10839 20230619_1883_Aki_TMTPro18x_K_F4 177.36 149.19 33126 28266 34032 33187 29683 36042 32811 38100 43782 40596 39083 40027 43263 38821 37869 40725 43741 42250 30646 25917 34426 33164 31303 36272 33263 38827 43798 40884 40504 40611 43786 40182 38940 40977 41784 40119 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52681000 11685 4025 11059 22338 17921 17921 1 9606 Homo sapiens 0.013048841115505638 HEDQLEVTR Unmodified 1125.5415 0.54145068 1330 A0A220T1R9;Q86XL3;F5H1D4;Q86XL3-3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 yes no 0 0 0 1 0 1 31.621 31.621 3 3.1127E-05 6629 20230619_1880_Aki_TMTPro18x_K_F1 153.97 116.42 19923 8923.3 18382 19845 21607 24852 22278 26067 25105 28230 32594 29661 30385 26703 25929 28157 37449 28583 18359 8278.3 18861 19191 22220 24752 22526 26584 25721 28447 32966 29954 30883 27716 27088 28295 35659 27176 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26345000 11686 1330 11060 22339 17922 17922 1 9606 Homo sapiens -0.016298384014362455 HEDSAIPR Unmodified 923.44609 0.44609374 2446 Q99459;B3KY60;B4DSH1 CDC5L Cell division cycle 5-like protein yes no 0 0 0 1.5 0.5 1 1 27.564 27.603 3 0.0027051 4844 20230619_1881_Aki_TMTPro18x_K_F2 90.709 40.005 6929 12234 10824 10734 10191 21020 11595 11385 11580 8849.1 12184 10253 9753.6 9249 12868 5529.2 25462 14249 6483.2 11170 10675 11099 10738 20235 11613 12225 11805 9135.9 12360 10311 10204 9387.9 13677 6126.7 24163 13482 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17963000 11687 2446 11061 22340;22341 17923 17923 1 9606 Homo sapiens -0.018691468018232626 HEDTNLASSTLLR Unmodified 1455.7318 0.73177065 2004 P49407;P49407-2;A8K103;H0YET9 ARRB1 Beta-arrestin-1 yes no 0 0 0 4 0 1 41.842 41.885 3 6.6852E-28 10350 20230619_1883_Aki_TMTPro18x_K_F4 205.96 0 46677 34458 42430 40835 51167 49803 46493 46809 64820 51482 55146 51726 54061 49568 45258 68053 67328 59390 43102 31615 43565 40846 52323 49636 47711 48142 64579 51827 56947 52480 54850 52150 47518 67534 64150 56530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88313000 11688 2004 11062 22342 17924 17924 1 9606 Homo sapiens 0.02213403470159392 HEEEFDLFMR Unmodified 1351.5867 0.58668632 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;A0A2R8YF80;B4E0F1;B4DSI8;B3KNW7;A0A2R8Y523;A0A2R8Y5K3;K7EQF0;A0A2R8YFK5 SMARCA4 Transcription activator BRG1 yes no 0 0 0 2.5 0.5 1 1 52.845 52.891 3 2.4713E-07 15711 20230619_1881_Aki_TMTPro18x_K_F2 155.11 135.35 36205 24662 30308 30621 28101 33015 31995 33612 38575 39682 41322 35038 40668 36635 33605 42668 38846 45512 33398 22646 31248 30473 29508 33213 32252 34448 39040 39642 42185 35863 41206 38061 34639 42912 37163 43173 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93570000 11689 1348 11063 22343;22344 17925 17925 1 9606 Homo sapiens -0.07504355930586826 HEEFEEGCK Unmodified 1163.4553 0.45533779 2121 B4DX01;A8K8F0;Q9HC38-2;Q9Y3E8;I3L3Q4;Q9HC38-3;I3L1F4 GLOD4 Glyoxalase domain-containing protein 4 yes no 0 0 0 2.5 0.5 1 1 35.473 35.53 3 6.3006E-06 7887 20230619_1881_Aki_TMTPro18x_K_F2 150.35 119.79 52518 31529 48867 50621 55130 65579 48075 48280 79229 63410 79026 70512 67676 64678 67460 49922 86424 76326 48453 29054 50045 49707 56693 64746 49852 50923 78866 63559 80521 71038 69485 66140 69542 51948 82437 72252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124050000 11690 2121 11064 22345;22346 17926 17926 1 9606 Homo sapiens -0.11985166298472905 HEELMLGDPCLK Unmodified 1440.6741 0.67412112 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 4 0 1 50.369 50.401 3 0.00051965 14169 20230619_1883_Aki_TMTPro18x_K_F4 93.623 71.425 262170 195790 226920 247820 198310 279950 286540 235760 328220 341980 307750 379180 414810 406340 271490 503990 466220 510400 242020 179750 233260 246360 211210 279490 284930 246920 331410 341230 321740 384170 413770 423170 290640 504510 444500 484550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120610000 11691 3402 11065 22347 17927 17927 1 9606 Homo sapiens -0.028588980513177376 HEEQSNEDIPIAEQSSK Unmodified 1939.8759 0.87592828 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B7Z3E7;A8KA50;C9JXV0 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 1 0 1 39.822 39.822 3 4.5581E-09 10018 20230619_1880_Aki_TMTPro18x_K_F1 121.62 104.93 21411 11793 18148 20812 25946 29120 21562 26719 31875 24997 31508 41301 35956 35497 25316 32312 43210 52203 19732 10887 18839 20367 26249 28740 22322 27401 31855 25865 32588 40961 36103 36637 26957 33610 41232 49339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22034000 11692 1984 11066 22348 17928 17928 1 9606 Homo sapiens -0.05641464351037939 HEFQAETK Unmodified 988.46141 0.46140945 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 3 0.816 1 1 1 34.58 34.636 3 1.09E-07 7407 20230619_1882_Aki_TMTPro18x_K_F3 211.56 179.34 109350 56999 121860 140860 159880 165380 138990 144740 160110 116540 186900 197620 168200 159620 163870 83966 204620 171910 100980 52934 123420 135470 162390 164760 142050 148590 162740 121830 189750 195490 172170 161900 168480 90821 195160 162470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 555050000 11693 1211 11067 22349;22350;22351 17929 17929 1 9606 Homo sapiens -0.03328280004609496 HEFSVDMTCGGCAEAVSR Oxidation (M) 2027.8135 0.8135445 3208 O00244;Q6IBA3;E5RIM7 ATOX1 Copper transport protein ATOX1 yes no 0 1 0 3 0 1 39.418 39.473 3 1.4469E-06 9327 20230619_1882_Aki_TMTPro18x_K_F3 101.67 97.828 19027 12231 19050 19042 17050 21447 20381 21557 22772 19362 23281 24285 21144 17928 23914 27996 27991 29930 17570 11263 19323 18697 17979 21490 20440 21955 23064 19834 23784 24233 21786 19235 24518 28062 26755 28400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26948000 11694 3208 11068 22352 17930 17930 1888 1 9606 Homo sapiens -0.1592497328688296 HEFSVDMTCGGCAEAVSR Unmodified 2011.8186 0.81862988 3208 O00244;Q6IBA3;E5RIM7 ATOX1 Copper transport protein ATOX1 yes no 0 0 0 3.5 0.5 1 1 44.372 44.431 3 1.0351E-18 11486 20230619_1883_Aki_TMTPro18x_K_F4 178.51 175.89 71725 45925 71739 74175 64554 80413 67316 73227 109230 89991 88182 106390 109060 106190 80633 94840 137900 133160 66232 42310 72782 72630 67853 80617 69029 75751 108040 90627 92458 107160 109470 108940 85718 97593 131350 126080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129180000 11695 3208 11068 22353;22354 17931;17932 17932 2 9606 Homo sapiens -0.1468066942425139 HEGALETLLR Unmodified 1137.6142 0.6142217 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;A0A3B3IT07;Q8WUM4-3;F8WEQ7;F8WBR8;C9IZF9 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 5 0 1 45.543 45.62 3 5.8611E-14 11845 20230619_1885_Aki_TMTPro18x_K_F5 183.78 149.03 35342 25183 30354 30223 33728 33933 33499 31564 46152 46369 40189 41132 51322 35918 38650 56785 42408 50428 32615 23111 31293 30164 34770 33994 34173 32803 46102 45918 41993 41830 51376 38360 39837 56311 40595 47935 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123740000 11696 3981 11069 22355 17933 17933 1 9606 Homo sapiens 0.05091915391994917 HEGLGAFYK Unmodified 1020.5029 0.50288033 2648 B7ZB41;B4E290;Q6NUK1-2;Q6NUK1 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes no 0 0 0 7.5 0.5 1 1 44.739 44.795 3 0.00016776 11426 20230619_1888_Aki_TMTPro18x_K_F8 121.64 65.381 266690 230220 241160 284580 298550 317380 313270 317560 367910 272500 279680 257700 317400 264910 251380 332210 321200 277290 246490 211180 248240 283330 305980 318460 316600 323180 367970 277570 292550 262810 319690 276540 261070 329470 306340 264120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 425070000 11697 2648 11070 22356;22357 17934;17935 17934 2 9606 Homo sapiens -0.006550992452957871 HEGVFICR Unmodified 1016.4862 0.48618441 3487 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R299;M0R0P1;M0R2U2;M0R1H0;M0R2B0 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 0 0 6 0.707 1 2 1 35.712 35.782 3 0.00056765 7892 20230619_1886_Aki_TMTPro18x_K_F6 133.55 89.74 239320 149510 222570 242650 259630 286860 258370 274850 297300 232350 285950 289400 305770 247310 248880 234150 307850 310160 220840 137770 228160 237830 266800 286290 261840 280450 299990 238930 294760 289760 308690 255950 257240 239840 294000 293780 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 526940000 11698 3487 11071 22358;22359;22360;22361 17936;17937;17938 17937 3 9606 Homo sapiens -0.02139923402887689 HEGVFIYR Unmodified 1019.5189 0.51886475 1973 A6NHQ2 FBLL1 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 yes yes 0 0 0 7 0 1 39.485 39.55 3 0.0019984 9064 20230619_1887_Aki_TMTPro18x_K_F7 105.57 73.633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11699 1973 11072 22362 17939 17939 1 9606 Homo sapiens 0.00988606991609231 HEGVSCDACLK Unmodified 1274.5384 0.53835592 4640 Q9P0J7 KCMF1 E3 ubiquitin-protein ligase KCMF1 yes yes 0 0 0 4 0 1 36.557 36.603 3 0.00024703 8169 20230619_1883_Aki_TMTPro18x_K_F4 89.805 63.687 32065 25600 30360 31130 39201 39239 40174 35682 40859 38792 43862 41155 44718 35897 36589 40217 55858 49368 29632 23486 31120 31092 40008 38993 40459 36788 41703 39116 44874 41503 45231 37458 38428 40845 53214 46816 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25593000 11700 4640 11073 22363 17940 17940 1 9606 Homo sapiens -0.08793172842115382 HEHQVMLMR 2 Oxidation (M) 1211.5539 0.5539464 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;H7C367;C9JYS8 NONO Non-POU domain-containing octamer-binding protein yes no 0 2 0 5 0 1 23.094 23.161 3 0.054317 3816 20230619_1885_Aki_TMTPro18x_K_F5 41.399 28.823 31629 6395.1 12818 17667 29794 18468 21569 24445 36821 23883 37084 33732 51220 36770 15101 64351 21109 30506 28965 6007.6 14848 16906 29352 18766 22683 24536 36617 24500 38567 34018 50059 39248 16606 62182 20204 29299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27356000 11701 1112 11074 22364 17941 17941 691;692 1 9606 Homo sapiens -0.04336841534359337 HEHQVMLMR Oxidation (M) 1195.559 0.55903178 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;H7C367;C9JYS8 NONO Non-POU domain-containing octamer-binding protein yes no 0 1 0 5.67 0.471 1 2 26.848 26.894 3 0.012144 4614 20230619_1886_Aki_TMTPro18x_K_F6 66.27 53.134 11217 1000 5263.3 6063.6 8955.1 4785.5 7911.9 10471 14687 9074.7 12125 10265 21015 13401 4780.3 22655 7248.1 11920 10269 938 5895 5686.7 8971.3 5067.6 8245.1 10257 14463 9293.7 12910 10518 20363 14211 5385.1 21962 6943.4 11419 3 1 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 9946500 11702 1112 11074 22365;22366;22367 17942;17943;17944 17943 691;692 3 9606 Homo sapiens -0.030925376717732433 HEILLSQSVR Unmodified 1180.6564 0.65642086 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 7.5 0.5 1 1 39.037 39.062 3 4.8469E-10 8867 20230619_1887_Aki_TMTPro18x_K_F7 204.34 166.86 55130 40109 61244 64001 59855 65536 69424 64813 70968 58519 66052 55492 57562 52099 53687 55268 65071 59782 50988 36925 61706 62663 62501 66106 69492 66118 71958 59409 67559 56397 58866 54021 55295 55743 62113 56753 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92305000 11703 3654 11075 22368;22369 17945;17946 17945 2 9606 Homo sapiens 0.07331890800355723 HEISEMNR Unmodified 1014.4553 0.45527821 2803 CON__Q922U2;CON__Q5XQN5;B4E1T1;CON__P13647;P13647;B4DL32;H0YI76 KRT5 Keratin, type II cytoskeletal 5 yes no 0 0 0 2 0 1 29.227 29.299 3 0.0028144 5468 20230619_1881_Aki_TMTPro18x_K_F2 91.318 72.224 + 7873.7 6478.7 9360.6 9012.2 39998 13033 14572 11991 14928 7596.8 11917 8735.4 6329.9 15134 10103 4985.1 13167 7577 7292.2 5951.6 9800 8944.5 38188 12934 16160 12209 15072 7973.1 12110 9040.7 6888.9 14822 10345 5343.1 12529 7189.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4064100 11704 2803 11076 22370 17947 17947 1 9606 Homo sapiens -0.051371215077892884 HELAPALR Unmodified 905.5083 0.50830006 793 A0A068F7M9;Q9Y613;B4DVN5 FHOD1 FH1/FH2 domain-containing protein 1 yes no 0 0 0 5 0 1 34.603 34.691 3 0.00938 7430 20230619_1885_Aki_TMTPro18x_K_F5 83.206 68.27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11705 793 11077 22371 17948 17948 1 9606 Homo sapiens 0.05176624337184421 HELENLR Unmodified 909.46683 0.46682918 211 C9IYD3;C9JQC9;C9JPY2;C9J670;A0A024R2S0;Q9NW15-2;Q9NW15-3;Q9NW15-5;Q9NW15 ANO10;TMEM16K Anoctamin;Anoctamin-10 yes no 0 0 0 2.5 0.5 1 1 31.861 31.932 3 5.7672E-05 6466 20230619_1881_Aki_TMTPro18x_K_F2 180.7 0 105100 85086 97628 116000 118980 133610 106130 102250 149370 122500 144270 170840 164100 141300 115450 161620 190080 168860 97123 78149 100220 114760 121670 133030 109080 107230 149450 124290 149230 170190 164640 147760 122620 162360 181000 160390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92003000 11706 211 11078 22372;22373 17949;17950 17949 2 9606 Homo sapiens 0.008474435778339284 HELFAGIK Unmodified 913.50215 0.50215205 1522 A0A3B3ITR6;O95363 FARS2 Phenylalanine--tRNA ligase, mitochondrial yes no 0 0 0 4.5 3.5 1 1 47.224 47.248 3 0.0076567 13245 20230619_1880_Aki_TMTPro18x_K_F1 84.498 49.674 92155 70933 84074 89899 84239 86969 91532 89690 106090 110090 119130 111740 122310 93135 105740 99892 113090 112280 85120 65112 86104 89198 87669 88252 92342 92002 107800 110200 121690 112710 123850 97118 108180 101000 108130 106510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20611000 11707 1522 11079 22374;22375 17951;17952 17951 2 9606 Homo sapiens 0.04194106105660467 HELIEFR Unmodified 942.49232 0.49231565 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;J3KS13;A0A8V8TQK7 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 4 0.816 1 1 1 41.95 42.003 3 3.9815E-08 10305 20230619_1885_Aki_TMTPro18x_K_F5 158.36 100.89 291810 228050 258710 295000 262000 303680 302140 298500 346150 351690 361590 355750 408990 349070 354750 416270 356320 369660 269500 209370 265860 292480 273190 306260 303700 306760 350870 352750 372290 360870 413300 363770 362130 414490 341000 351550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1311000000 11708 826 11080 22376;22377;22378 17953;17954;17955 17955 3 9606 Homo sapiens 0.018769181002767255 HELLLGAGSGPGAGQQQATPGALLQAGPPR Unmodified 2848.4944 0.49438792 1897 B2R9I9;A0MNP2;Q96DI7;Q96DI7-2 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes no 0 0 0 2 0 1 54.477 54.501 3 7.2919E-75 16379 20230619_1881_Aki_TMTPro18x_K_F2 284.88 266.18 19044 14224 16468 17823 15537 18835 17514 19145 18731 18926 19688 21424 23232 22151 20246 21504 20652 23788 17580 13057 16938 17718 16285 18971 17593 19529 19059 19216 20323 21658 23470 22783 20670 21747 19778 22558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 351310000 11709 1897 11081 22379 17956 17956 1 9606 Homo sapiens 0.14408049835810743 HELLQPFNVLYEK Unmodified 1628.8562 0.85624288 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 3.67 3.09 1 1 1 60.288 60.305 3 0.00010386 18645 20230619_1880_Aki_TMTPro18x_K_F1 84.566 70.408 205000 137070 179290 178770 136480 150340 166910 171100 191560 212750 193760 214150 214360 175580 179800 204190 205180 248650 189150 125940 183590 176790 146060 154670 167400 174510 194000 212740 199710 215870 216440 184030 184990 207140 196370 235540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1522299999.9999998 11710 654 11082 22380;22381;22382 17957;17958;17959 17957 3 9606 Homo sapiens 0.06696900957467733 HELQANCYEEVK Unmodified 1518.6773 0.67729224 3495 V9HWI5;P23528;G3V1A4;E9PK25;E9PP50 HEL-S-15;CFL1 Cofilin-1 yes no 0 0 0 3.67 1.65 1 2 3 3 1 1 1 47.91 47.973 3;4 4.3774E-07 9933 20230619_1883_Aki_TMTPro18x_K_F4 153.75 132.52 1044200 780810 934320 984040 1112300 1255100 1102200 1115400 1269400 1401700 1389500 1379600 1611100 1275500 1228100 1677200 1589800 1425800 964190 716780 961170 980520 1141700 1245300 1117200 1156500 1289700 1400500 1429200 1398400 1618700 1340500 1277900 1663600 1516500 1357500 8 7 7 8 8 8 8 8 8 8 8 7 8 8 8 7 8 7 35814000000 11711 3495 11083 22383;22384;22385;22386;22387;22388;22389;22390;22391;22392;22393;22394 17960;17961;17962;17963;17964;17965;17966 17964 7 9606 Homo sapiens -0.06129931672967359 HELQVEMK Unmodified 1012.5012 0.50116577 1901 A0RZB8;Q6URC4;O60610-2;O60610-3;O60610;A0A1E1ERW3;A0A2R8Y5N1 DIAPH1 Protein diaphanous homolog 1 yes no 0 0 0 4 0 1 40.989 41.032 3 0.0010577 9978 20230619_1883_Aki_TMTPro18x_K_F4 120.99 55.737 145160 109620 131290 118320 132810 136060 135590 139310 179840 155860 177660 165630 183670 169650 153770 204280 206100 178620 134050 100470 134440 119110 137930 136390 137950 142510 180540 157010 182520 167990 186000 176590 160050 203150 196500 170030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133080000 11712 1901 11084 22395 17967 17967 1 9606 Homo sapiens -0.004584763255479629 HELSTEYIPDPER Unmodified 1584.742 0.74200098 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 0 2 0 1 44.145 44.228 3 1.9446E-07 11821 20230619_1881_Aki_TMTPro18x_K_F2 118.24 96.682 99213 84163 95282 101150 99704 106660 111230 102230 73117 110620 98551 108260 118800 90687 104120 119040 127470 118240 91730 77187 97220 100840 103390 107360 110340 105010 77877 111170 100910 109380 119850 95679 107500 119080 121670 112350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119300000 11713 1532 11085 22396 17968 17968 1 9606 Homo sapiens -0.026980335953112444 HEMLPASLIQAQR Unmodified 1492.782 0.78203208 3630 P52209-2;P52209;B4E2U0;B4DL86;B4DV68;A9Z1X1 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 1 0 1 47.372 47.372 3 3.5027E-08 13204 20230619_1880_Aki_TMTPro18x_K_F1 161.25 134.58 59193 39425 50769 61786 57694 72016 64518 68631 94958 73306 70978 80392 98963 84529 53763 115430 103920 109220 54606 36301 52459 60649 59706 71912 65572 70457 94028 74123 75173 81494 98040 88679 58575 114960 98985 103780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 342130000 11714 3630 11086 22397 17969 17969 1 9606 Homo sapiens 0.05535234594299254 HEMLPASLIQAQR Oxidation (M) 1508.7769 0.7769467 3630 P52209-2;P52209;B4E2U0;B4DL86;B4DV68;A9Z1X1 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 1 0 7 0 1 43.061 43.14 3 1.8174E-06 10479 20230619_1887_Aki_TMTPro18x_K_F7 136.61 121.93 69921 54429 61598 66196 72239 78778 72882 62862 76013 62444 70521 60930 62769 53419 77661 67886 67773 60430 64571 49939 63452 66038 74217 78349 73523 65345 76995 63127 72249 61723 65008 56106 78108 67608 64889 57503 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77281000 11715 3630 11086 22398 17970 17970 2320 1 9606 Homo sapiens 0.04290930731667686 HEMLPEFYK Unmodified 1192.5587 0.55868065 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;H0YH27;Q86VP6-3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 6.5 0.5 1 1 50.298 50.377 3 9.8677E-05 14048 20230619_1886_Aki_TMTPro18x_K_F6 138.98 122.75 100840 79940 87292 91558 74219 98246 93268 92490 106010 111930 106900 102310 116490 102390 115130 131400 109460 113270 93125 73299 89648 91621 78813 98688 93356 95405 107370 111800 110050 104360 118530 107120 116880 130520 104810 107760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 375090000 11716 2126 11087 22399;22400 17971 17971 1 9606 Homo sapiens -0.029896341199901144 HENEALWR Unmodified 1053.4992 0.49919194 2918 E9PI02;E9PMQ6;Q53HT3;Q00613-2;Q00613;B4DTG4 HSF1 Heat shock factor protein 1 yes no 0 0 0 3 0 1 35.26 35.317 3 0.00020703 7701 20230619_1882_Aki_TMTPro18x_K_F3 141.52 98.651 63894 38121 69407 66532 89809 85633 82292 83645 95862 51524 69683 65790 65302 55930 60672 42170 74066 68233 59023 35170 70324 65076 91358 85074 83813 84721 95686 54303 72508 65816 66590 57324 62406 44125 70696 64553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45503000 11717 2918 11088 22401 17972 17972 1 9606 Homo sapiens -0.025417690191716247 HENTSSSPIQYEFSLTR Unmodified 1994.9334 0.93338358 2185 Q59GA0;E9PIM6;B0YJA4;E9PNQ8;P04216;J3QRJ3 THY1 Thy-1 membrane glycoprotein yes no 0 0 0 6 0 1 48.752 48.831 3 6.2569E-05 13414 20230619_1886_Aki_TMTPro18x_K_F6 93.381 82.746 23436 18848 24008 26622 28356 28725 29369 25133 32461 30725 28171 33409 37841 33664 27672 39488 39798 43439 21673 17319 24421 26261 29114 28807 29635 26091 32744 30850 29558 33796 37857 35025 29052 39772 37987 41203 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28497000 11718 2185 11089 22402 17973 17973 1 9606 Homo sapiens -0.024285773548399447 HENVIGIR Unmodified 936.51411 0.51411372 3185 Q8NHX0;L7RXH5;P27361-2;P27361;E9PBK7;E9PJF0;E9PQW4;P27361-3;Q7Z3H5 MAPK3;DKFZp686O0215 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 0 0 0 5.5 0.5 1 1 33.973 34.039 3 0.012824 7268 20230619_1886_Aki_TMTPro18x_K_F6 71.692 47.842 42319 18703 76048 53257 136870 46822 98028 90924 44411 39515 67869 68863 41235 42988 121770 32477 64493 50295 39277 17440 75104 50899 135240 49048 99456 88485 49215 43469 67569 67706 46742 44601 118740 34101 62162 47634 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14440000 11719 3185 11090 22403;22404 17974 17974 1 9606 Homo sapiens 0.0433172284884904 HENVVNLIEICR Unmodified 1494.7613 0.76129664 500 B5BU53;B2R9L6;A0A024R880;P50750;P50750-2 CDK9 Cyclin-dependent kinase 9 yes no 0 0 0 6.5 0.5 1 1 49.794 49.875 3 0.00020224 13851 20230619_1886_Aki_TMTPro18x_K_F6 97.631 72.334 71798 56563 68939 69190 69831 82403 73615 81283 90173 67160 64750 61904 61460 58172 64351 66565 60050 58145 66352 51898 70287 69025 72638 82278 74534 82704 89854 68512 67479 62978 63014 60538 65161 66293 57483 55322 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217920000 11720 500 11091 22405;22406 17975 17975 1 9606 Homo sapiens 0.03370644214624008 HENYDEALR Unmodified 1145.5102 0.51015055 4090 Q68CN2;Q71SV8;Q9HCS7 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 yes no 0 0 0 2 0.816 1 1 1 32.645 32.689 3 4.0286E-18 7043 20230619_1880_Aki_TMTPro18x_K_F1 226.39 177.6 80202 66294 73789 73188 99564 93744 85485 91803 108390 87298 111770 105270 104960 98462 97199 107810 105190 98203 74117 60757 75850 73651 100930 93249 87735 93766 109180 89063 114170 105900 107030 102210 99474 107640 100520 93401 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150920000 11721 4090 11092 22407;22408;22409 17976;17977 17976 2 9606 Homo sapiens -0.0567841143554233 HEPGLGGPAER Unmodified 1118.5469 0.54687041 3936 Q15554-4;Q15554 TERF2 Telomeric repeat-binding factor 2 yes no 0 0 0 2.5 0.5 1 1 30.299 30.379 3 1.5363E-06 5851 20230619_1881_Aki_TMTPro18x_K_F2 132.56 81.599 28067 29791 25120 28107 24760 35182 31553 29228 37982 29472 30375 34267 33732 26026 33938 37115 44563 33546 25979 27244 25789 28630 26006 34901 31605 30285 38000 29937 31704 34292 34333 27706 35105 36910 42459 31941 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59357000 11722 3936 11093 22410;22411 17978 17978 1 9606 Homo sapiens -0.007661148189754385 HEPIGYDR Unmodified 985.46174 0.4617438 1361 E7ETD6;E9PE19;A0A2R8Y7Q1;J3QQK4;Q12830-4;Q12830-2;Q12830;F5GXF5;B4DDK2;B4DM40 BPTF Nucleosome-remodeling factor subunit BPTF yes no 0 0 0 2 0 1 30.518 30.583 3 0.00057322 5917 20230619_1881_Aki_TMTPro18x_K_F2 133.23 109.68 21073 17199 19987 23554 26770 22285 21841 23375 27368 24423 32314 31042 28802 28072 25943 26589 32909 27378 19477 15797 20505 23242 27091 22673 22488 23838 27750 24833 32753 31117 29398 28954 26817 26793 31382 26015 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44532000 11723 1361 11094 22412 17979 17979 1 9606 Homo sapiens -0.031568602847755756 HEPLVLFCESCDTLTCR Unmodified 2135.9438 0.94383039 2263 B2R8R5;Q13263;Q13263-2;M0R3C0;M0R2I3 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 5 0.816 1 1 1 54.612 54.665 3 1.1409E-23 15679 20230619_1885_Aki_TMTPro18x_K_F5 205.68 199.4 107300 80585 98224 100230 95613 105520 119580 108090 120200 148400 149350 142840 174850 133810 124390 159760 153920 144590 99100 73966 100520 99702 100150 106370 119200 111340 123720 147600 152880 144970 175140 139760 129200 159190 146920 137530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 479990000 11724 2263 11095 22413;22414;22415 17980;17981;17982 17981 3 9606 Homo sapiens -0.07870377287918018 HEQEYMEVR Oxidation (M) 1235.5241 0.52408606 2561 B4DP27;Q6FHT8;Q15363;F5GX39;E7EQ72;B4E020 RNP24;TMED2 Transmembrane emp24 domain-containing protein 2 yes no 0 1 0 1.5 0.5 3 3 29.271 29.307 3 0.00043786 5415 20230619_1880_Aki_TMTPro18x_K_F1 110.39 96.18 31650 23062 30599 31327 41598 36160 35850 43735 43365 35018 37677 41574 39585 39812 42242 38685 52094 46251 29238 21190 31327 31029 42118 36386 36728 43892 43515 36061 39047 41844 40526 41046 43427 39333 49708 43871 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 355370000 11725 2561 11096 22416;22417;22418;22419;22420;22421 17983;17984;17985;17986 17983 1557 4 9606 Homo sapiens -0.08425501998772233 HEQEYMEVR Unmodified 1219.5292 0.52917144 2561 B4DP27;Q6FHT8;Q15363;F5GX39;E7EQ72;B4E020 RNP24;TMED2 Transmembrane emp24 domain-containing protein 2 yes no 0 0 0 1.5 0.5 1 1 33.769 33.798 3 5.7588E-09 7161 20230619_1881_Aki_TMTPro18x_K_F2 187.99 175.78 90163 85418 86176 88287 108060 128190 117330 107900 127990 110120 127700 141160 141400 114110 130410 127910 162380 149990 83423 78201 88245 89477 110830 126140 118040 111690 129720 112160 131740 140940 143350 119370 134540 129570 154970 142280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 433160000 11726 2561 11096 22422;22423 17987;17988 17988 2 9606 Homo sapiens -0.07181198136140665 HEQILVLDPPTDLK Unmodified 1616.8774 0.87737225 2148 A8KA83;Q9P0L0;Q9P0L0-2;J3QKM9 VAPA Vesicle-associated membrane protein-associated protein A yes no 0 0 0 5 0.816 1 1 1 55.129 55.181 3 0.00039756 16163 20230619_1886_Aki_TMTPro18x_K_F6 91.207 77.049 23406 20308 21555 23177 22592 20258 32678 30024 23630 29830 34921 31541 33120 27193 24569 35204 27087 33540 21637 18614 22079 23150 23589 20948 32082 29998 25044 30178 35190 31822 33438 28618 25336 35123 25937 31851 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 476540000 11727 2148 11097 22424;22425;22426 17989 17989 1 9606 Homo sapiens 0.09360866266320045 HEQISDLER Unmodified 1125.5415 0.54145068 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 2 0.816 1 1 1 34.052 34.093 3 1.6251E-06 7597 20230619_1880_Aki_TMTPro18x_K_F1 182.46 103.52 139150 139920 143600 145940 164480 190220 165600 163120 191350 164880 198320 186250 190340 160700 183680 196820 250110 201050 128890 128080 145850 147520 169300 188400 167720 168550 193640 167260 202720 187360 194270 168520 190600 197410 238320 191090 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 229780000 11728 1552 11098 22427;22428;22429 17990;17991;17992 17991 3 9606 Homo sapiens -0.01629838401413508 HEQNIDCGGGYVK Unmodified 1475.6463 0.64632646 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;B4DHR1 CALR;HEL-S-99n Calreticulin yes no 0 0 0 4 1.51 1 2 2 1 1 37.474 37.533 3;4 1.8007E-08 8494 20230619_1885_Aki_TMTPro18x_K_F5 165.51 153.15 396580 298620 350860 363850 452750 420130 421910 413650 528750 498610 581150 631500 588070 513970 568500 614720 665150 595400 366170 274030 361720 362890 461020 420670 430480 425340 534640 503440 594460 631010 599220 539140 583990 614970 634990 565970 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 6534599999.999999 11729 1691 11099 22430;22431;22432;22433;22434;22435;22436 17993;17994;17995;17996 17995 4 9606 Homo sapiens -0.07247084987193375 HEQNRQDLVK Unmodified 1265.6476 0.64764709 4114 Q6NXE6-2;Q6NXE6;B4E1N1;F5H4P3;Q68CW5;F5GWV0;F5H6J3 ARMC6;DKFZp762A1314 Armadillo repeat-containing protein 6 yes no 0 0 1 4.5 0.5 1 1 29.641 29.713 4 0.0010649 5432 20230619_1883_Aki_TMTPro18x_K_F4 105.46 64.871 43715 28040 42360 39364 64050 53218 51476 60858 56274 48607 55283 48796 55971 41316 50301 33682 62117 45303 40357 25788 43428 39018 64340 52964 52801 61260 57016 49775 56752 49269 56797 42514 51797 34683 59203 42968 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40591000 11730 4114 11100 22437;22438 17997;17998 17997 2 9606 Homo sapiens 0.02544917163891114 HEVGHIDNSMK Oxidation (M) 1281.5772 0.57718426 2641 B4E0N6;Q969X5-2;Q969X5;A0A8I5KSL7;A0A8I5KXB6;A0A8I5KPY8;A0A8J8YV97;A0A8I5KS17;Q969X5-3 ERGIC1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes no 0 1 0 3.5 0.5 1 1 29.515 29.601 4 0.019952 5451 20230619_1883_Aki_TMTPro18x_K_F4 67.153 44.62 51344 29454 50286 59251 74072 70672 65338 73336 94275 57853 81871 80039 74133 63659 73188 58561 78234 73835 47380 27237 51572 57479 74788 70625 67268 74301 93754 60031 84223 79700 75869 65939 74632 59845 74774 69983 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 26823000 11731 2641 11101 22439;22440 17999;18000;18001 18001 1593 3 9606 Homo sapiens -0.05234124216076452 HEVGHIDNSMK Unmodified 1265.5823 0.58226964 2641 B4E0N6;Q969X5-2;Q969X5;A0A8I5KSL7;A0A8I5KXB6;A0A8I5KPY8;A0A8J8YV97;A0A8I5KS17;Q969X5-3 ERGIC1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes no 0 0 0 4 0 1 33.37 33.423 4 0.0017758 6925 20230619_1883_Aki_TMTPro18x_K_F4 88.987 63.602 47525 35218 49127 52226 67061 74654 63373 61949 79785 58444 74301 76622 68655 63194 64163 64746 85238 71516 43931 32390 50067 51606 68162 73468 64598 64068 80046 59858 76253 76502 70093 65683 66482 65428 81256 67905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29112000 11732 2641 11101 22441 18002 18002 1 9606 Homo sapiens -0.03989820353467621 HEVININLK Unmodified 1078.6135 0.61349341 2269 V9HWG9;B2R983;P78417;Q5TA02;P78417-3;P78417-2;Q5TA01 HEL-S-21;GSTO1 Glutathione S-transferase omega-1 yes no 0 0 0 7.5 0.5 1 1 46.995 47.063 3 2.9768E-05 12272 20230619_1888_Aki_TMTPro18x_K_F8 154.75 93.924 235930 179370 204270 206030 219130 243180 235390 234330 282260 274400 269040 276190 301890 245010 263080 321140 296670 299770 217820 164500 210370 206440 227020 242920 237850 241030 284450 275250 278120 279290 305180 257820 270380 320130 283550 284940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 346180000 11733 2269 11102 22442;22443 18003 18003 1 9606 Homo sapiens 0.07733120742932442 HEVNYQNVVHK Unmodified 1365.6789 0.67894722 4082 Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3 ZMYM4 Zinc finger MYM-type protein 4 yes no 0 0 0 7 0 1 37.077 37.142 4 7.1716E-17 8135 20230619_1887_Aki_TMTPro18x_K_F7 192.3 169.38 55438 46042 50348 55302 64585 67023 63683 67508 72159 61380 75480 72310 77627 60298 55201 81967 87939 74117 51228 42229 51811 55248 65918 66906 64530 68751 73123 62701 77326 72572 78087 63744 58475 81501 83727 70530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53956000 11734 4082 11103 22444 18004 18004 1 9606 Homo sapiens 0.010734901979731148 HEVTAVFAADAMAR Oxidation (M) 1503.714 0.7140121 1903 A1L0T0;Q59GP4;E9PJS0;E9PL44 ILVBL Acetolactate synthase-like protein yes no 0 1 0 4.5 0.5 1 1 43.192 43.255 3 0.010841 10895 20230619_1885_Aki_TMTPro18x_K_F5 62.357 49.797 32977 24350 31395 32896 36854 38634 39021 36206 42856 26393 29936 38741 35684 32788 43420 33505 38453 35023 30462 22370 32116 32589 37894 38572 39320 36910 42880 27606 31663 38550 36624 34034 43684 33782 36815 33261 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100680000 11735 1903 11104 22445;22446 18005 18005 1220 1 9606 Homo sapiens -0.01769635056371044 HEVTAVFAADAMAR Unmodified 1487.7191 0.71909747 1903 A1L0T0;Q59GP4;E9PJS0;E9PL44 ILVBL Acetolactate synthase-like protein yes no 0 0 0 6 0 1 47.645 47.726 3 6.2674E-09 12895 20230619_1886_Aki_TMTPro18x_K_F6 160.27 146.61 118420 111460 118570 104980 126030 137460 125760 126210 163540 95760 103560 98916 108370 97300 109190 108400 102350 107990 109610 101970 120460 107090 130360 136350 127970 128870 161860 98663 109270 100290 110540 100990 110640 108750 98028 102550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236600000 11736 1903 11104 22447 18006 18006 1 9606 Homo sapiens -0.005253311937394756 HEVTILGGLNEFVVK Unmodified 1653.909 0.90900673 1936 H7C4M9;C9JZG9;C9JZY6;A4D1L5;P62256-2;P62256 UBE2H Ubiquitin-conjugating enzyme E2 H yes no 0 0 0 8 0 1 61.358 61.387 3 6.1034E-08 18364 20230619_1888_Aki_TMTPro18x_K_F8 136.33 117.49 38261 30197 34468 37617 29981 35082 37087 33815 37550 42955 38863 35991 43728 38168 42727 44693 35844 46439 35342 27712 35283 37346 31705 35639 37002 34893 38318 42709 40017 36937 44422 39655 43101 44900 34435 44051 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39721000 11737 1936 11105 22448 18007 18007 1 9606 Homo sapiens 0.1082085902023664 HEWEAHNK Unmodified 1049.4679 0.46789181 2337 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 3.5 0.5 1 1 30.147 30.228 3 0.01657 5655 20230619_1883_Aki_TMTPro18x_K_F4 69.812 33.852 28410 19384 29215 30845 28396 28604 29412 26983 40932 34224 38471 48761 43230 39775 32111 36804 62282 57795 26249 17849 29602 30164 29583 29055 29952 27898 40931 34660 39848 48485 43500 41179 34532 38190 59268 54688 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17838000 11738 2337 11106 22449;22450 18008 18008 1 9606 Homo sapiens -0.054863420532456075 HFALMQR Oxidation (M) 917.45416 0.454156 2802 CON__Q3ZBS7 yes yes 0 1 0 1.75 0.829 2 1 1 33.898 33.929 3 0.007747 7375 20230619_1880_Aki_TMTPro18x_K_F1 92.692 38.167 + 103340 79494 130130 133970 245890 264230 175680 208380 305820 113580 187250 182290 115710 120890 300460 92678 185330 135930 95723 73219 131730 132380 244510 255880 185110 214010 298700 122350 194820 179870 129250 125120 294740 96708 178090 128830 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 79078000 11739 2802 11107 22451;22452;22453;22454 18009;18010;18011 18009 1671 3 9606 Homo sapiens -0.007872910860328375 HFALMQR Unmodified 901.45924 0.45924138 2802 CON__Q3ZBS7 yes yes 0 0 0 3 0 1 38.826 38.88 3 0.00048369 9119 20230619_1882_Aki_TMTPro18x_K_F3 154.29 104.17 + 41318 43679 43785 68579 125640 199900 87116 74295 258860 59904 83277 74838 44793 42814 233560 40162 67839 43804 38294 40150 45749 68695 123850 189060 95048 84157 246250 62362 92240 74197 55872 45044 223950 41241 66343 41654 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117050000 11740 2802 11107 22455 18012 18012 1 9606 Homo sapiens 0.004570127765759935 HFCDQHCLLR Unmodified 1384.6129 0.61285826 773 B4DZH0;A8K126;A0A024RDS3;Q9UBW7 ZNF198;ZMYM2 Zinc finger MYM-type protein 2 yes no 0 0 0 7.5 0.5 1 1 35.278 35.308 4 2.0947E-06 7443 20230619_1887_Aki_TMTPro18x_K_F7 145.25 130.1 31071 26589 30449 32824 34842 32821 34456 39771 39486 39544 44810 45158 46451 40902 39639 48047 41541 45022 28734 24391 31056 32647 35793 33363 34941 40128 40159 40136 45792 45462 47036 42693 40581 47978 39752 42782 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37257000 11741 773 11108 22456;22457 18013 18013 1 9606 Homo sapiens -0.06406365240059131 HFCPNVPIILVGNK Unmodified 1606.8654 0.86536778 220 P61586;A0A024R324;B4DKN9;A0A994J514;P08134;A0A024R0C8;Q9BVT0;Q5JR08;Q5JR05;C9JX21;E9PQH6;C9JNR4;A0A7I2V3G1;Q5JR07 RHOA;RHOC;ARHA Transforming protein RhoA;Rho-related GTP-binding protein RhoC yes no 0 0 0 4.5 0.5 1 1 57.014 57.048 3 1.2346E-11 16644 20230619_1885_Aki_TMTPro18x_K_F5 173.04 141.36 168530 108340 140860 166370 119990 169570 170620 169980 229160 188870 167650 191420 209650 175320 174290 214870 215080 240130 155420 99748 145300 163200 128100 171060 170840 174150 227620 190050 176880 193610 211010 183540 180330 216560 205570 227720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1164200000 11742 220 11109 22458;22459 18014;18015 18015 2 9606 Homo sapiens 0.08620971042137171 HFCPNVPIILVGNKK Unmodified 1734.9603 0.9603308 220 P61586;A0A024R324;B4DKN9;A0A994J514;P08134;A0A024R0C8;Q9BVT0;Q5JR08;Q5JR05;C9JX21;E9PQH6;C9JNR4;A0A7I2V3G1;Q5JR07 RHOA;RHOC;ARHA Transforming protein RhoA;Rho-related GTP-binding protein RhoC yes no 0 0 1 6 0 1 53.167 53.244 3 0.0022571 15288 20230619_1886_Aki_TMTPro18x_K_F6 69.345 59.557 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11743 220 11110 22460 18016 18016 1 9606 Homo sapiens 0.12224904513300316 HFDETVNR Unmodified 1016.4676 0.46755746 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 2 0.816 1 1 1 31.689 31.736 3 4.3902E-11 6350 20230619_1881_Aki_TMTPro18x_K_F2 227.71 179.86 85298 81583 83194 94671 112870 113100 106120 107580 140040 105320 117890 118480 121220 105130 109800 117550 142290 102830 78940 74765 85194 94776 114670 112890 108400 110210 139760 107050 122130 119250 123130 109500 113670 117110 135550 97965 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1375300000 11744 3384 11111 22461;22462;22463 18017;18018 18017 2 9606 Homo sapiens -0.04001761773088219 HFDHYIR Unmodified 986.47225 0.47224891 1545 A8K563;A0A494C066;B7Z4W5;Q16773-2;Q16773;Q9UQN7 CCBL1 Kynurenine--oxoglutarate transaminase 1 yes no 0 0 0 7 0 1 32.975 33.062 3 0.007359 6561 20230619_1887_Aki_TMTPro18x_K_F7 91.906 57.828 25555 14535 21156 26345 23642 27758 21930 23550 30993 23221 32750 36039 31558 31525 28401 27120 35251 37129 23552 13420 21924 25624 24357 27843 22500 24352 31092 23897 33482 35839 32132 32418 29306 27893 33674 35152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6233900 11745 1545 11112 22464 18019 18019 1 9606 Homo sapiens -0.021528328396811958 HFDLNLR Unmodified 913.477 0.47699993 2133 B0UZZ8;A8K9A1;O15213;B4DP15;A0A1U9X8W1;A0A1U9X8U7;A0A1U9X8U3;B4DNI0;A8K806 C6orf11;WDR46 WD repeat-containing protein 46 yes no 0 0 0 7.5 0.5 1 1 43.929 43.98 3 0.0016088 11087 20230619_1888_Aki_TMTPro18x_K_F8 138.85 59.38 39993 30296 39050 48466 46928 42151 51178 50808 55634 46150 43425 46796 53080 43014 45273 54276 46885 50513 36956 27887 39916 47343 48155 43302 51477 51196 55934 46916 45578 47359 53487 45095 46314 54126 44869 48004 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54970000 11746 2133 11113 22465;22466 18020;18021 18021 2 9606 Homo sapiens 0.01680051303083019 HFDSQVIIYGK Unmodified 1305.6717 0.67173657 1578 A0A5F9ZHN7;Q9NTJ5;E9PGZ4;B4DVV3;Q9NTJ5-2;F8WDN7 SACM1L Phosphatidylinositide phosphatase SAC1 yes no 0 0 0 1 0 1 49.68 49.68 3 0.054892 14232 20230619_1880_Aki_TMTPro18x_K_F1 44.612 32.169 25580 28838 23879 25770 23819 26865 26123 28979 34199 25607 28381 26341 27918 22574 33147 29294 28672 33250 23696 26357 24410 26319 24829 27153 26461 29362 34120 26094 29371 26600 28746 23779 33348 29561 27508 31522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31435000 11747 1578 11114 22467 18022 18022 1 9606 Homo sapiens 0.03112757597568816 HFDWLYER Unmodified 1164.5352 0.53524309 1696 A0A7P0T8Z7;A0A7P0Z4A2;A0A7P0Z4A5;A0A7P0T8D4;B2RAU5;A0A7P0T8S8;A0A7P0T8Z2;A0A7P0T8C7;Q9Y5X1;B3KXH8;A0A7P0TBI9;Q59ES5;O95061 SNX9;WISP Sorting nexin;Sorting nexin-9 yes no 0 0 0 6 0 1 50.991 51.068 3 0.00097022 14364 20230619_1886_Aki_TMTPro18x_K_F6 107.69 92.254 38283 32824 33226 34655 33218 40667 35588 40030 42751 33548 35740 40271 38689 37668 35162 51460 47800 49490 35371 30066 34184 34945 34623 40652 35981 40753 42843 34473 37160 40520 39281 39640 36607 51327 45625 47021 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23843000 11748 1696 11115 22468 18023 18023 1 9606 Homo sapiens -0.04044311842312709 HFEALANR Unmodified 956.48281 0.48281359 2974 F5H365;Q15436;B4DSQ5;B4E0Q9;B4DF60;Q15436-2 SEC23A Protein transport protein Sec23A yes no 0 0 0 6 0.816 1 1 1 35.516 35.587 3 8.0285E-06 7535 20230619_1887_Aki_TMTPro18x_K_F7 172.14 123.58 84056 71611 87330 88237 114990 115450 109700 114170 117300 93064 110810 103060 106140 97554 102410 104090 112380 97122 77770 65690 88857 88115 117000 114660 111150 116120 118730 95528 113750 104060 108360 101100 104760 104120 107320 92377 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 242610000 11749 2974 11116 22469;22470;22471 18024;18025 18025 2 9606 Homo sapiens 0.0028314981475432432 HFEANNGKLPDNK Unmodified 1482.7215 0.72154031 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;Q9P2J5-3;Q9HAM7;Q9NPU8;B3KXA9;Q9NVC0 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 0 1 7 0 1 39.211 39.275 4 0.0017311 8985 20230619_1887_Aki_TMTPro18x_K_F7 89.189 77.656 83726 58185 81708 82747 91498 101900 88176 90408 100360 95673 108620 113410 104300 91600 108010 104790 107400 92772 77331 53501 83320 81774 94200 101300 89508 93289 101870 96953 110920 113570 106770 95850 109710 104450 102670 88296 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55184000 11750 1603 11117 22472 18026;18027 18027 2 9606 Homo sapiens -0.0005115946444220754 HFEATDILVSK Unmodified 1258.6558 0.65575216 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 0 5.5 0.5 1 1 51.662 51.737 3 4.0601E-05 14580 20230619_1886_Aki_TMTPro18x_K_F6 134.13 111.55 560810 412730 484530 526090 469180 549000 465830 472140 539070 594680 576910 569680 686730 481510 541690 672550 617880 618250 517660 378950 498510 522190 489030 551610 472430 491010 547090 593610 594760 576600 689810 510140 558300 669330 590450 587790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 422690000 11751 817 11118 22473;22474 18028 18028 1 9606 Homo sapiens 0.036770513606370514 HFEELETIMDR Unmodified 1418.65 0.65001485 4016;645 Q58EY4;Q92922;B4DYQ1;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 no no 0 0 0 3 0.816 1 1 1 53.593 53.627 3 1.6632E-12 16016 20230619_1881_Aki_TMTPro18x_K_F2 204.17 182.13 51983 40389 46429 51703 40459 53788 52464 45904 68058 55387 61642 53488 66036 54819 59777 65315 63272 68584 48009 37077 47582 51299 42930 54029 52667 47725 68141 55463 63680 54482 66953 57078 61120 65633 60542 65087 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 239500000 11752 4016;645 11119 22475;22476;22477 18029;18030 18029 2 9606 Homo sapiens -0.042564152133081734 HFEGLIAR Unmodified 941.5083 0.50830006 754 A0A024RDA1;A1LT29;Q9NV70-2;Q9NV70 EXOC1 Exocyst complex component 1 yes no 0 0 0 7 0 1 41.498 41.569 3 0.0003582 9894 20230619_1887_Aki_TMTPro18x_K_F7 145.34 112.99 41447 84954 36456 40963 45895 66118 50585 43760 53838 42131 41471 44157 42222 34870 35153 40655 45942 43432 38647 77290 37645 45438 47182 64544 50796 46214 54144 42770 43179 44405 42742 36591 36494 40903 43835 41232 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30132000 11753 754 11120 22478 18031 18031 1 9606 Homo sapiens 0.03520624337170375 HFELGGDK Unmodified 901.42938 0.42938104 3022;2213 H0Y5B4;H7BZ11;J3KQN4;P83881;R4GN19;B2R4V2;Q969Q0 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a;60S ribosomal protein L36a-like no no 0 0 0 3.5 1.12 1 1 1 1 41.533 41.594 3 0.00036603 10238 20230619_1883_Aki_TMTPro18x_K_F4 144.9 74.633 504380 408580 480270 470030 573680 569440 566040 526550 669930 520010 415310 377880 673900 426270 339580 644860 676990 569560 466180 374620 491150 471090 587950 567550 574110 540670 666640 522050 448770 392270 663200 450440 371420 639270 643740 542160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1228800000 11754 3022;2213 11121 22479;22480;22481;22482 18032;18033;18034 18033 3 9606 Homo sapiens -0.025276476877593268 HFELGGDKK Unmodified 1029.5243 0.52434406 3022;2213 H0Y5B4;H7BZ11;J3KQN4;P83881;R4GN19;B2R4V2;Q969Q0 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a;60S ribosomal protein L36a-like no no 0 0 1 7.5 0.5 1 1 40.154 40.181 3 0.025721 9389 20230619_1887_Aki_TMTPro18x_K_F7 53.751 41.224 63858 52355 62342 66912 66325 79498 75509 80069 92967 76485 80108 71235 90933 65863 60044 85624 94108 84730 59037 48051 63557 66542 68898 79418 76139 81632 93167 77361 83164 72438 90956 69225 63615 85595 89647 80521 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 473440000 11755 3022;2213 11122 22483;22484 18035 18035 1 9606 Homo sapiens 0.010762857834379247 HFEQAIER Unmodified 1028.5039 0.50394297 1777 D3DUJ0;A0A8I5KVV1;Q8TA92;Q9Y4W6;A0A8I5QJR7;A0A8I5KYF5 AFG3L2 AFG3-like protein 2 yes no 0 0 0 2.5 0.5 1 1 35.084 35.141 3 0.00011482 7625 20230619_1882_Aki_TMTPro18x_K_F3 151.44 122.71 43239 38566 47572 52820 67209 61110 60708 60696 81250 58948 67721 66627 63272 58009 67327 75587 74816 68858 40037 35412 48280 52266 67997 61178 62198 61987 81000 59949 69924 67043 64958 61013 68849 75278 71470 65495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84851000 11756 1777 11123 22485;22486 18036 18036 1 9606 Homo sapiens -0.00916884876369295 HFFLQGEK Unmodified 1004.508 0.50796571 1999 A8K0P8;Q68CQ4;B3KVX2 DIEXF Digestive organ expansion factor homolog yes no 0 0 0 1 0 1 45.8 45.8 3 0.0026788 12633 20230619_1880_Aki_TMTPro18x_K_F1 90.601 70.824 33750 28396 34986 36973 35042 37708 39458 35142 42032 37283 38778 38974 39996 27723 36800 37662 38099 33004 31223 26064 35451 36640 36497 38018 39603 36158 42534 37619 39996 39104 40587 29513 37551 37428 36405 31415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33552000 11757 1999 11124 22487 18037 18037 1 9606 Homo sapiens 0.005892046173357812 HFFLYGEFPGDER Unmodified 1612.731 0.73104237 110 F5H8D7;A0A024R0S8;Q59HH7;P18887;B2RCY5 XRCC1 DNA repair protein XRCC1 yes no 0 0 0 6 0.816 1 1 1 56.116 56.181 3 0.0028914 16560 20230619_1886_Aki_TMTPro18x_K_F6 71.976 53.38 28480 24106 28007 28946 25758 31244 29682 29571 37192 31757 32147 34533 35874 30342 28694 37349 33195 33547 26337 22108 28464 28869 27072 31377 29935 30388 37252 32075 33391 34790 36158 31800 29601 37184 31720 31902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173480000 11758 110 11125 22488;22489;22490 18038 18038 1 9606 Homo sapiens -0.05081391178941885 HFFTVTDPR Unmodified 1118.5509 0.55089316 1841 S4R3N9;A0A8V8TP06;B4DRS6;Q9BWM7;A0A8V8TM72 SFXN3 Sideroflexin;Sideroflexin-3 yes no 0 0 0 8 0 1 43.488 43.498 3 0.002972 10899 20230619_1888_Aki_TMTPro18x_K_F8 84.213 48.768 25967 23104 27617 28812 31508 34145 42409 42534 44221 30907 29776 24277 32979 25916 30319 30315 30181 30671 24037 21193 27996 28711 32690 34308 42159 42543 44329 31672 31340 25036 33420 26932 30869 30415 28881 29126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37541000 11759 1841 11126 22491 18039 18039 1 9606 Homo sapiens -0.003640253252342518 HFGAGGNQR Unmodified 942.44201 0.44201141 4389 Q96QK1;Q53FR4;Q5HYM2 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 5.5 0.5 1 1 23.167 23.221 3 1.3979E-05 3854 20230619_1886_Aki_TMTPro18x_K_F6 134.81 110.86 128350 84601 130850 144610 195300 177660 160220 160420 195860 121730 184110 204410 157540 149950 160120 104760 205290 178720 118560 77990 133720 141430 196550 176740 164650 164090 196730 127730 188430 201760 161910 154060 164930 110350 195800 169060 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 84310000 11760 4389 11127 22492;22493 18040;18041;18042 18041 3 9606 Homo sapiens -0.031511915048668016 HFGQAPSK Unmodified 870.4348 0.43480077 4074 Q5VT52-3;Q5VT52;Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes no 0 0 0 1 0 1 34.917 34.917 3 0.036384 7945 20230619_1880_Aki_TMTPro18x_K_F1 53.775 37.621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11761 4074 11128 22494 18043 18043 1 9606 Homo sapiens -0.005599241053005244 HFIDVGAGVIDEDYR Unmodified 1704.8107 0.81074925 3541 P33316-2;H0YNW5;P33316;H0YKC5;H0YNJ9;H0YMM5;A0A0C4DGL3;H0YKI0;H0YMP1 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes no 0 0 0 3 0.816 1 1 1 54.149 54.18 3 1.5426E-26 15996 20230619_1882_Aki_TMTPro18x_K_F3 242.07 224.16 532720 440500 524500 498270 443440 571820 478050 432080 626500 517850 479680 489190 528480 422260 506450 554720 506400 485360 492560 403790 532130 499530 468890 569400 484640 453580 623860 518320 501290 495630 536650 444830 515640 551330 484370 461810 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1360800000 11762 3541 11129 22495;22496;22497 18044;18045;18046;18047 18046 4 9606 Homo sapiens -0.013463692955838269 HFILDECDK Unmodified 1175.5281 0.5281088 724 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;F6TRA5;Q59G92;A0A0A0MT12;B4DIJ6;F6S4E6;B4DIZ8;A0A140T973;A0A140T9K1;A0A140T9L4 DDX39B;hCG_2005638 Spliceosome RNA helicase DDX39B yes no 0 0 0 3 1.41 1 1 1 1 1 46.243 46.298 3 1.4408E-08 12278 20230619_1883_Aki_TMTPro18x_K_F4 180.8 158.08 913890 757690 820950 913950 881650 918690 994520 936930 1066600 1090500 1131600 1151700 1178700 1011600 985830 1232200 1218200 1174700 844410 694970 843150 910310 913720 929330 998390 960290 1085400 1095600 1160000 1161800 1192600 1059600 1020000 1230800 1163000 1116500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2767600000 11763 724 11130 22498;22499;22500;22501;22502 18048;18049;18050 18050 3 9606 Homo sapiens -0.052634125050417424 HFIMQVVCEATQCPDTR Unmodified 2090.9336 0.93360005 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 0 0 3.67 3.09 1 1 1 57.501 57.523 3 1.3259E-30 16803 20230619_1888_Aki_TMTPro18x_K_F8 238.32 233.11 53408 37779 52113 51851 39564 47723 54841 51228 59287 55577 57671 56672 59798 51180 53826 66189 59727 57804 49333 34721 52863 51158 42529 48633 54557 52232 60065 55972 59334 57323 60687 53752 55233 65771 57076 54998 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 300400000 11764 3904 11131 22503;22504;22505 18051;18052 18052 2 9606 Homo sapiens -0.0682294022244605 HFLEAIENNK Unmodified 1213.6091 0.60913632 2690 B7Z592;Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes no 0 0 0 6 0.816 1 1 1 50.252 50.33 3 2.0576E-07 14027 20230619_1886_Aki_TMTPro18x_K_F6 183.67 157.97 177810 155460 172850 164840 145160 196210 169600 162680 235470 147290 115610 93706 145410 104590 131770 155900 135860 122360 164450 142390 175570 166190 154050 195220 171580 168100 231180 148300 125410 98081 146750 110340 134580 153890 129850 116630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 378040000 11765 2690 11132 22506;22507;22508 18053 18053 1 9606 Homo sapiens 0.010876115293513067 HFLLEEDKPEEPTAHAFVSTLTR Unmodified 2666.334 0.33403068 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 1 6 0.816 1 1 1 53.143 53.216 4;5 1.9212E-08 15034 20230619_1887_Aki_TMTPro18x_K_F7 114.63 105.81 201700 202270 238180 230580 165610 172580 179560 170380 192900 227870 262900 235980 251820 213700 222800 288970 247760 249580 187050 185310 237710 229890 177960 179010 180900 175940 198630 227400 265740 238650 255950 225080 228830 286780 236830 237470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2986499999.9999995 11766 3606 11133 22509;22510;22511 18054;18055 18055 2 9606 Homo sapiens 0.0675170211893601 HFLPEMLSK Unmodified 1100.5689 0.56885141 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;Q2TU89;E9PKF8 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 1.5 0.5 1 1 53.088 53.105 3 0.00036884 15601 20230619_1880_Aki_TMTPro18x_K_F1 105.4 77.915 90577 70544 80108 89952 77541 98715 97920 90011 111790 104170 93204 98209 104860 86597 95233 113780 106000 118320 83648 64756 82294 89344 81430 98919 97945 92959 112370 104370 97054 99569 106200 91181 97709 114090 101400 112280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 141530000 11767 3752 11134 22512;22513 18056;18057 18056 2 9606 Homo sapiens 0.022589736052623266 HFLPEMLSK Oxidation (M) 1116.5638 0.56376603 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;Q2TU89;E9PKF8 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 1 0 8 0 1 47.344 47.402 3 0.0022844 12430 20230619_1888_Aki_TMTPro18x_K_F8 84.213 66.739 56314 53723 56192 64079 64833 69526 68906 70092 84948 65615 70169 60548 75909 58605 69505 78906 70267 72851 52125 49247 57273 63936 66771 69914 69723 71441 84989 66440 72875 61712 76950 61618 70886 78599 67241 69249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73458000 11768 3752 11134 22514 18058 18058 2421 1 9606 Homo sapiens 0.010146697426307583 HFLQQATQVNAWDR Unmodified 1712.8383 0.83830141 38 A0A024QZF1;P37198 hCG_19665;NUP62 Nuclear pore glycoprotein p62 yes no 0 0 0 1.5 0.5 1 1 49.269 49.298 3 2.202E-47 14120 20230619_1881_Aki_TMTPro18x_K_F2 250.81 180.32 138750 114160 138210 150870 146340 160860 158370 156460 186190 162460 171410 153500 170440 160400 168160 184680 175770 171350 128300 104810 140650 149450 151700 161790 159840 160320 187450 163670 176420 156600 173990 166440 171550 184420 168070 162900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 292830000 11769 38 11135 22515;22516 18059;18060 18060 2 9606 Homo sapiens 0.010395787553079572 HFLVPASR Unmodified 925.51339 0.51338544 1155 P0DPI3;A0A0U1RRI6;A0A0U1RR11 yes no 0 0 0 2.5 0.5 1 1 37 37.057 3 0.00065539 8403 20230619_1882_Aki_TMTPro18x_K_F3 128.61 0 96316 81900 86859 94086 98549 100360 92256 86561 113790 77429 97544 91152 102350 81848 101060 78667 97349 88582 89010 75079 89219 94105 101260 100740 94044 89193 113930 79251 101020 91623 104210 84599 102450 79748 93118 84062 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137830000 11770 1155 11136 22517;22518 18061;18062 18062 2 9606 Homo sapiens 0.047649281997905746 HFPEFPATR Unmodified 1100.5403 0.54032847 4204 Q8IVM0;Q8IVM0-2 CCDC50 Coiled-coil domain-containing protein 50 yes no 0 0 0 7.5 0.5 1 1 43.562 43.607 3 2.4904E-06 10926 20230619_1888_Aki_TMTPro18x_K_F8 153.24 105.67 76243 63895 81028 78705 73445 78045 84954 74190 85951 72520 75410 69747 79847 67256 80196 76933 83949 73161 70547 58616 81781 78277 77139 78899 85020 76066 87052 73331 78048 70882 81371 69974 81726 76965 80211 69568 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58779000 11771 4204 11137 22519;22520 18063;18064 18064 2 9606 Homo sapiens -0.005920079796851496 HFPLDLR Unmodified 896.48684 0.48683634 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;A0A7P0Z4H6;A0A590UJX5;A0A7P0T999;E9PJF6 AMPD2 AMP deaminase 2 yes no 0 0 0 7.5 0.5 1 1 45.878 45.941 3 0.0012533 11863 20230619_1888_Aki_TMTPro18x_K_F8 138.85 73.585 35922 33720 38352 39927 39616 42142 42557 48068 51336 42424 40989 40745 46330 40119 45130 57601 43640 53463 33265 30910 38785 39857 41119 42587 43022 48525 51377 43136 42782 41465 47068 42324 45905 57329 41837 50787 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121080000 11772 1570 11138 22521;22522 18065 18065 1 9606 Homo sapiens 0.03445239308473447 HFPNIDR Unmodified 897.4457 0.4456998 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 6 0.816 1 1 1 36.848 36.923 3 0.0019798 8324 20230619_1886_Aki_TMTPro18x_K_F6 128.57 97.337 216980 156750 172180 221710 200030 235270 228990 220560 282430 246590 289950 314180 328720 256130 270800 311640 325520 361520 200140 144100 179390 218600 206640 236440 230790 227130 284860 249950 298940 313920 331390 269200 279640 314930 311170 342710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 376820000 11773 3881 11139 22523;22524;22525 18066;18067;18068 18067 3 9606 Homo sapiens -0.00712521731020388 HFPNIDREK Unmodified 1154.5833 0.58325592 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 6.5 0.5 1 1 37.936 38.006 4 0.0093626 8504 20230619_1887_Aki_TMTPro18x_K_F7 78.556 57.093 87702 79515 76970 66963 85521 67763 91795 72153 83504 85730 94906 77701 90410 66613 85533 108970 103850 80924 81068 72693 79120 68788 88096 68721 91910 73823 86004 85658 96537 78995 92132 71327 88196 107180 99027 77243 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176100000 11774 3881 11140 22526;22527 18069 18069 1 9606 Homo sapiens 0.012147620777341217 HFQQQEQER Unmodified 1228.5585 0.55849773 3967 Q3KQU3-4;Q6NX58;D3DPS3;Q3KQU3;Q3KQU3-2;A1L1B7;Q3KQU3-3 MAP7D1;RPRC1 MAP7 domain-containing protein 1 yes no 0 0 0 2 0 1 23.104 23.175 3 0.00096104 3780 20230619_1881_Aki_TMTPro18x_K_F2 86.898 69.034 26137 21426 29365 25970 39938 39812 34181 34904 37397 24305 34924 34205 26617 30125 34789 18612 39524 32835 24193 19654 29696 26043 40450 39102 34899 35704 37761 25458 35597 34126 27875 30582 35399 19744 37725 31061 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62969000 11775 3967 11141 22528 18070 18070 1 9606 Homo sapiens -0.046639177956194544 HFRPELEER Unmodified 1211.6047 0.60471964 2460 Q96ID4;B4DE93;G3V0I5;E5KNH5;P49821-2;P49821;Q53G70;B4DUN7 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 1 3 0 1 32.751 32.822 3 0.011907 6699 20230619_1882_Aki_TMTPro18x_K_F3 70.363 21.566 61168 41152 74996 75188 106770 110960 86393 103610 101860 61592 94015 103030 84063 75202 85100 57880 96093 96345 56604 37969 75504 73548 107770 109260 88809 105170 102420 65800 96461 101730 86192 77583 86967 60694 91836 91101 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42005000 11776 2460 11142 22529 18071 18071 1 9606 Homo sapiens 0.007381471064718426 HFSGLEEAVYR Unmodified 1306.6306 0.63060004 3621 Q53HU0;P50990;P50990-2;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 8 0 1 45.052 45.08 3 1.2369E-09 11494 20230619_1888_Aki_TMTPro18x_K_F8 189.57 172.21 41527 35588 39572 42183 46643 48488 45844 44920 60560 48024 48597 46407 51053 43700 46777 53411 49535 49431 38395 32633 40480 42145 47873 48485 46713 46219 60360 48355 50513 47112 51833 45676 47831 53278 47367 46993 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204980000 11777 3621 11143 22530 18072 18072 1 9606 Homo sapiens -0.0104500344191365 HFSVEGQLEFR Unmodified 1347.6571 0.65714914 751;3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7;Q14568;Q58FG1;A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF7 EL52;HSP90AA1;HSP90AA2P;HSP90AA4P;HSP90AB1;HSP90AB3P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Putative heat shock protein HSP 90-alpha A4;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 no no 0 0 0 5 0 1 48.118 48.195 3 1.1601E-06 12995 20230619_1885_Aki_TMTPro18x_K_F5 145.23 118.34 51707 45074 46460 48149 51266 53298 52713 50550 74230 42017 44658 45046 44875 38841 44705 46253 42623 44878 47791 41289 47709 48463 52935 53468 53702 51617 73120 43084 47224 45397 45800 40654 45358 46285 40817 42632 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50795000 11778 3177;751 11144 22531 18073 18073 1 9606 Homo sapiens -0.0027731455061257293 HFTEDIQTR Unmodified 1145.5465 0.54653606 2119;421 A0A994J591;C9J2M4;P78362-2;P78362;A0A024R704;H7C5L6;Q9UPE1;Q59GF4;E7ETV6;A8MPY5;A8MPP7;H7C521;Q9UPE1-4;Q9UPE1-3;Q9UPE1-2;H7C2I2;A8K8B2;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3;A0A024RCU9 SRPK2;SRPK3;SRPK1 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal;SRSF protein kinase 3;SRSF protein kinase 1 no no 0 0 0 3 0 1 35.726 35.783 3 1.5659E-05 7866 20230619_1882_Aki_TMTPro18x_K_F3 162.88 123.86 41034 27941 43109 45400 42273 46118 40811 39712 48340 51541 61278 59947 56236 43728 52186 41861 58249 57224 37919 25736 43613 44395 43937 46417 41495 41349 49339 51702 62026 59888 57326 45582 53412 42994 55666 54192 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50509000 11779 421;2119 11145 22532 18074 18074 1 9606 Homo sapiens -0.020415345388073547 HFTILDAPGHK Unmodified 1234.6459 0.64585618 3455;2572 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6;H3BSV8;B4DQM6;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B no no 0 0 0 1 0 1 43.585 43.585 4 5.9956E-05 11692 20230619_1880_Aki_TMTPro18x_K_F1 114.86 94.237 36629 38535 38059 36792 33075 45124 41655 35653 28832 44874 47036 68111 65718 53247 37132 52514 80272 83868 33941 35245 38473 37433 35004 44786 41125 37356 30904 45528 48339 67496 65141 55425 40720 54483 76411 79313 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83828000 11780 3455;2572 11146 22533 18075 18075 1 9606 Homo sapiens 0.037919081459449444 HFVALSTNTTK Unmodified 1217.6404 0.64043645 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;B4DVJ0;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;A0A0J9YXP8 GPI Glucose-6-phosphate isomerase yes no 0 0 0 2.5 0.5 1 1 42.291 42.362 3 1.2057E-12 10608 20230619_1882_Aki_TMTPro18x_K_F3 208.15 185.12 906070 696880 737700 748050 863740 1313400 863760 967560 1522100 464130 504100 507100 523110 470010 609150 526860 608770 520540 836220 638690 765780 758640 891910 1276200 890500 998220 1469200 499920 566000 512170 538130 488900 617380 528510 581860 494800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 503540000 11781 1326 11147 22534;22535 18076;18077;18078 18078 3 9606 Homo sapiens 0.04032184563448027 HFVGMLPEK Unmodified 1056.5426 0.54263666 3684 V9HWA6;P60981;P60981-2;F6RFD5;B7Z9M9 HEL32;DSTN Destrin yes no 0 0 0 4.5 3.5 1 1 48.143 48.172 3 0.0010813 13599 20230619_1880_Aki_TMTPro18x_K_F1 96.331 61.799 263050 238500 244570 246930 218840 276230 270910 267250 311730 216070 198220 167600 215950 169220 246410 236220 233780 190250 243260 218380 249660 249220 231100 276900 271350 272270 310470 219840 209400 172640 221250 178090 249260 233780 223500 181340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 460250000 11782 3684 11148 22536;22537 18079;18080 18079 2 9606 Homo sapiens 0.016627044337838015 HFVLDECDK Unmodified 1161.5125 0.51245874 3204 O00148;B4DX78;O00148-2;K7EQN7;A0A024R7H0;O00148-3;A0A0D9SEM9;K7EPJ3 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A yes no 0 0 0 3.5 0.5 1 1 44.421 44.48 3 0.00018363 11483 20230619_1883_Aki_TMTPro18x_K_F4 128.28 113.4 538300 447190 482450 469820 537540 575200 598020 560090 609540 665570 729390 680250 748010 581340 630150 783240 819980 725760 497370 409650 495510 474300 555480 573560 599830 576020 625320 667300 743120 686960 756990 613770 654130 780160 782070 690290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1031399999.9999999 11783 3204 11149 22538;22539 18081;18082 18082 2 9606 Homo sapiens -0.06183699022108158 HFWTAES Unmodified 876.37662 0.37661719 3878 Q14157-1;Q14157-4;B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like yes no 0 0 0 4 0 1 44.806 44.85 2 0.036589 11659 20230619_1883_Aki_TMTPro18x_K_F4 92.279 88.426 63390 52466 55348 59166 66196 72731 69928 70522 80948 74181 70953 71456 75332 58404 66404 74128 75754 66615 58557 48093 57084 59394 68027 72478 70619 72276 81452 74697 73460 72216 76294 61525 68236 73803 72328 63384 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84351000 11784 3878 11150 22540 18083 18083 1 9606 Homo sapiens -0.06651605750585077 HFYTFTNEHHR Unmodified 1487.6694 0.66944516 2170 A8QI98;Q9Y2L1;F2Z2C0 DIS3 Exosome complex exonuclease RRP44 yes no 0 0 0 7.5 0.5 1 1 31.743 31.792 4 4.3498E-06 6246 20230619_1888_Aki_TMTPro18x_K_F8 121.36 110.46 27425 20268 25108 31433 32788 32303 34302 33957 43929 22598 33707 37730 34412 29760 30102 27678 36811 30413 25326 18651 25851 30818 33478 32629 34777 34290 43710 23942 35118 37344 34907 30837 31038 28017 35111 28881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28568000 11785 2170 11151 22541;22542 18084 18084 1 9606 Homo sapiens -0.05488278087523213 HGAEVIDTPVFELK Unmodified 1553.809 0.80895834 1641 P12081;P12081-4;E7ETE2;A0A6Q8PHA5;A0A6Q8PFF2;Q52NV4;A0A6Q8PF47;A0A6Q8PHE3;B4DDD8;B3KWE1;B4DEA2;A0A6Q8PFG9;A0A6Q8PFN6 HARS;HRS Histidine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0.816 1 1 1 55.761 55.831 3 5.1766E-05 16203 20230619_1885_Aki_TMTPro18x_K_F5 99.011 77.638 109830 97711 112690 126830 103110 125940 123730 118360 121940 134250 126840 125610 136410 117730 149100 144180 136370 133730 101630 89667 114200 125650 108470 127210 123540 121910 124620 134550 130380 127660 139520 123090 150660 143910 130580 127140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 227890000 11786 1641 11152 22543;22544;22545 18085;18086;18087 18086 3 9606 Homo sapiens 0.05420621686448612 HGAGAEISTVNPEQYSK Unmodified 1786.8486 0.84859132 3599;3755 P48426;P48426-2;H7BXS3;B4DH09;P78356 PIP4K2A;PIP4K2B Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha;Phosphatidylinositol 5-phosphate 4-kinase type-2 beta no no 0 0 0 4.5 0.5 1 1 43.15 43.212 3 8.1947E-10 10837 20230619_1885_Aki_TMTPro18x_K_F5 141.34 125.45 18484 16122 19049 19794 20338 18664 22634 21412 27140 25923 24823 24729 27810 23736 20924 22905 27996 26242 17103 14787 19325 19679 21057 19035 22823 21808 27308 25924 25699 25112 27968 24481 21797 23216 26706 24896 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102020000 11787 3599;3755 11153 22546;22547 18088 18088 1 9606 Homo sapiens -0.013359031007439626 HGANPDLRDEDGK Unmodified 1422.6488 0.6487693 895 H0YJP0;A0A8I5QJU2;A0A087X2H1;Q9ULT8;A0A8I5KUD6;A0A8I5KU01;H0YJD4 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes no 0 0 1 2 0 1 31.877 31.94 4 0.040555 6506 20230619_1881_Aki_TMTPro18x_K_F2 45.347 35.008 15670 13595 10560 13937 17945 18925 19054 17991 26964 22286 21534 23789 26326 19159 16868 28455 25546 24607 14456 12449 11287 14114 18105 18745 19369 18554 26800 22350 22560 23927 26257 20414 17861 28194 24352 23416 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11166000 11788 895 11154 22548 18089 18089 1 9606 Homo sapiens -0.04564913257877379 HGAPGEEGQPSHAALAER Unmodified 1812.8503 0.85032266 976 A0A0S2Z5L2;A0A0A8K9B1;F5H0R1;Q9H6E5 URLC6;TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase yes no 0 0 0 2 0 1 28.276 28.351 4 4.5291E-14 5122 20230619_1881_Aki_TMTPro18x_K_F2 130.27 114.43 2683.6 1096.7 3118 1844 2288.6 2633.4 4263 2697.6 5207.8 1804.3 3225.4 3471 2761.3 4378.2 3581.9 3010.9 2909.6 3868.6 2477 1013.7 3112.8 1813.3 2495.8 2602.6 4206.7 2732.1 5155.6 1931.7 3385.9 3480.5 2886 4404.5 3588.1 3098.9 2797.1 3661.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7872300 11789 976 11155 22549 18090 18090 1 9606 Homo sapiens -0.023588492921362558 HGATHVFASK Unmodified 1053.5356 0.53557744 2629;940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370;D7EZH4;B7ZAX9;B4DZC0;O60264 SMARCA1;SMARCA5 Probable global transcription activator SNF2L1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 no no 0 0 0 1.5 0.5 1 1 31.724 31.756 4 8.4031E-05 6377 20230619_1881_Aki_TMTPro18x_K_F2 114.97 97.601 280470 211230 255680 281210 349950 335120 296950 291410 375410 283240 300450 273470 297270 242150 264340 292160 337710 257940 259030 194010 263280 278860 354400 333880 304830 300520 374840 286630 311430 277140 301970 253470 273550 290830 321850 245650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 368950000 11790 940;2629 11156 22550;22551 18091;18092;18093 18092 3 9606 Homo sapiens 0.010951078775633505 HGDEIITSTTSNYETQTFSSK Unmodified 2345.0659 0.065913898 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q53GM6 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 4.67 0.471 1 2 49.167 49.224 3 1.1653E-23 13604 20230619_1883_Aki_TMTPro18x_K_F4 192.62 179.96 32059 28360 31812 37468 32287 37331 38245 30492 32599 41048 42699 44031 43134 38101 36737 40655 41193 41594 29657 26031 32383 37071 33649 37600 38038 31944 33967 41000 43363 44343 43709 39626 37737 40861 39373 39495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197820000 11791 1863 11157 22552;22553;22554 18094;18095 18094 2 9606 Homo sapiens -0.052816421993611584 HGDEIYIAPSGVQK Unmodified 1512.7573 0.75725712 4356 Q96GX9;B4DY17 APIP Methylthioribulose-1-phosphate dehydratase yes no 0 0 0 4.5 0.5 1 1 44.913 44.974 3 0.00045923 11717 20230619_1883_Aki_TMTPro18x_K_F4 90.156 70.147 52549 41657 52544 58508 53882 58428 62561 56463 58703 65147 73631 70992 68089 57537 75378 64549 73247 72235 48581 38277 53437 57682 56060 59037 62463 58083 60629 65530 74611 71344 69998 60177 76342 65223 70096 68531 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173400000 11792 4356 11158 22555;22556 18096 18096 1 9606 Homo sapiens 0.021388779925246126 HGDGTTLDIMLK Unmodified 1299.6493 0.64928657 2933 P55786;E9PLK3;B7Z899;A0A7I2V3W8;A0A7I2V389;P55786-2;B3KU93;B7Z1H4;B7Z1V9 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 6 0 1 51.192 51.269 3 0.0039984 14447 20230619_1886_Aki_TMTPro18x_K_F6 71.555 48.319 79289 65833 81526 99716 83043 79959 76779 94697 109100 102720 117900 97520 113580 87188 108480 114930 96973 98639 73341 60535 82732 97616 85931 82694 78858 95920 109640 103220 120210 98996 115720 91769 109810 114130 92905 93854 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57346000 11793 2933 11159 22557 18097 18097 1 9606 Homo sapiens 0.011447901376413938 HGDLPDIQIK Unmodified 1134.6033 0.60332266 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 6 0.816 1 1 1 48.063 48.144 3 0.0004922 13012 20230619_1886_Aki_TMTPro18x_K_F6 102.52 80.531 421620 345640 390650 419300 414560 445550 449170 426380 527850 468780 484550 469660 538790 457020 464640 538890 491370 493340 389630 317060 399940 417770 429700 448190 453270 438150 531500 471730 501430 476510 544650 476120 475670 537510 469890 469050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1072899999.9999999 11794 3758 11160 22558;22559;22560 18098;18099 18099 2 9606 Homo sapiens 0.04140513017705416 HGDPGDAAQQEAK Unmodified 1322.5851 0.58510641 3221 O14737;O14737-2;Q3HM38;X6R2P6;K7ESJ4 PDCD5 Programmed cell death protein 5 yes no 0 0 0 2 0.816 1 1 1 31.287 31.336 3 0.00024307 6129 20230619_1882_Aki_TMTPro18x_K_F3 95.401 75.742 6694.7 5335.2 10236 9886.4 13213 12310 10817 11951 13516 7193.7 12030 15925 9428.6 9891.6 12753 6888.1 11641 12318 6216.5 4920.1 10143 9635.8 13400 12253 11133 12108 13530 7796.3 12331 15548 9875 10235 12815 7295.4 11154 11640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57399000 11795 3221 11161 22561;22562;22563 18100;18101 18101 2 9606 Homo sapiens -0.06328273694953168 HGDTALHVACQR Unmodified 1363.6415 0.64151585 746 Q7LC14;Q96F31;A0A024RD24;O00221 NFKBIE NF-kappa-B inhibitor epsilon yes no 0 0 0 5.5 0.5 1 1 27.939 27.992 4 1.5765E-09 4980 20230619_1885_Aki_TMTPro18x_K_F5 138.76 125.08 7998.7 9020.6 10912 9531.8 8977.3 13964 11926 9086.3 11532 10384 11645 12849 11623 9770.1 10897 10416 15460 10826 7436 8255.7 10812 9644.6 9576.9 13666 11839 9663 11769 10506 11951 12820 11833 10212 11340 10484 14716 10295 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16416000 11796 746 11162 22564;22565 18102 18102 1 9606 Homo sapiens -0.025759243392940334 HGEAVVPPR Unmodified 960.51411 0.51411372 4377 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 EP400 E1A-binding protein p400 yes no 0 0 0 4 0 1 27.091 27.165 3 0.0071963 4666 20230619_1883_Aki_TMTPro18x_K_F4 68.016 46.488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11797 4377 11163 22566 18103 18103 1 9606 Homo sapiens 0.032277228488510445 HGECAQTIR Unmodified 1070.4927 0.49272635 4702 Q9Y263;E5RIM3 PLAA Phospholipase A-2-activating protein yes no 0 0 0 2.5 0.5 1 1 23.028 23.14 3 0.001673 3750 20230619_1882_Aki_TMTPro18x_K_F3 92.538 71.637 55731 38395 70059 65016 106320 111710 83727 101970 93914 66571 95852 105550 83449 86506 92732 53012 105070 100980 51592 35383 70487 64050 106880 109140 86092 103810 95070 70390 97801 104670 86115 88065 94584 56641 100390 95417 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81146000 11798 4702 11164 22567;22568 18104 18104 1 9606 Homo sapiens -0.03970030242157918 HGEGAWNK Unmodified 897.40931 0.4093143 432 A0A024R782;P07738;Q59GR5;C9JH23 BPGM Bisphosphoglycerate mutase;Phosphoglycerate mutase yes no 0 0 0 5 0 1 34.085 34.17 3 0.0039913 7237 20230619_1885_Aki_TMTPro18x_K_F5 84.568 65.953 17444 12164 20465 21591 26318 28889 25950 27783 31927 19836 29467 29533 29752 26119 24028 19349 29395 27502 16138 11217 20636 21110 26861 28613 26370 28241 32035 20790 30353 29424 30092 26699 24801 20031 28060 26042 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13089000 11799 432 11165 22569 18105 18105 1 9606 Homo sapiens -0.043493986277098884 HGEIDYEAIVK Unmodified 1272.635 0.63501672 896 V9HW24;A0A087X2I1;P62333 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 4 0 1 47.945 47.985 3 3.6015E-07 13048 20230619_1883_Aki_TMTPro18x_K_F4 136.02 98.002 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11800 896 11166 22570 18106 18106 1 9606 Homo sapiens 0.00960460980991229 HGELWCAVSK Unmodified 1185.5601 0.56007764 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 0 8 0 1 46.109 46.147 3 0.0013726 11914 20230619_1888_Aki_TMTPro18x_K_F8 80.763 56.42 110840 84421 102140 107960 113800 127880 117480 114870 153210 113070 125990 109470 120850 102830 107830 113570 123330 109960 102380 77505 104700 107340 117480 127490 119320 118210 152830 114370 130190 111130 122900 106860 110760 113750 117760 104530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124020000 11801 3337 11167 22571 18107 18107 1 9606 Homo sapiens -0.025280000312250195 HGEPEEDIVGLQAFQER Unmodified 1952.9228 0.9228189 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 1.5 0.5 1 1 51.377 51.399 3 1.3003E-23 14901 20230619_1880_Aki_TMTPro18x_K_F1 183.36 174.88 72143 62471 65057 72377 76041 78524 75081 76845 75008 76541 91773 80325 89435 65150 87039 87257 84215 91072 66679 57268 66877 72370 78049 78927 75786 78613 77089 77465 93201 80931 91143 68932 88398 87539 80651 86435 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 229540000 11802 81 11168 22572;22573 18108;18109 18108 2 9606 Homo sapiens -0.015525600092360037 HGESAWNLENR Unmodified 1311.5956 0.59561152 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8 PGAM1 Phosphoglycerate mutase;Phosphoglycerate mutase 1 yes no 0 0 0 3.83 1.57 1 2 2 1 35.375 35.434 3 2.5937E-17 7935 20230619_1887_Aki_TMTPro18x_K_F7 230.41 214.53 250660 195830 250290 236860 266150 276630 284510 276550 250380 299430 301220 336860 342000 257220 293030 299440 340660 337220 231710 179670 254430 236440 275400 276770 284850 283130 259350 302330 308720 337380 345190 270390 301480 302340 325450 319910 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1819999999.9999998 11803 3475 11169 22574;22575;22576;22577;22578;22579 18110;18111;18112;18113 18113 4 9606 Homo sapiens -0.04772246249854106 HGEVCPAGWK Unmodified 1139.5182 0.51821282 1476;3838 A0A384NPQ2;Q06830;B2R4P2;A0A0A0MRQ5;V9HW63;Q13162;H7C3T4 PRDX1;HEL-S-97n;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 no no 0 0 0 6.5 0.5 1 1 40.242 40.32 3 0.00039801 9401 20230619_1887_Aki_TMTPro18x_K_F7 93.111 67.172 137750 116710 109860 128130 139500 164090 122240 163120 235410 172260 170270 260610 295480 282320 161410 407830 424820 586850 127190 106940 114470 128960 142490 163170 127770 166840 230800 176510 183670 261490 291850 297280 182430 416850 405040 554900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 393970000 11804 1476;3838 11170 22580;22581 18114 18114 1 9606 Homo sapiens -0.04596555719740536 HGEVCPAGWKPGSETIIPDPAGK Unmodified 2402.1689 0.1688796 3838 V9HW63;Q13162 HEL-S-97n;PRDX4 Peroxiredoxin-4 yes no 0 0 1 7 0.816 1 1 1 51.681 51.757 4 2.5183E-08 14667 20230619_1886_Aki_TMTPro18x_K_F6 112.54 105.1 300620 247650 311290 286630 279190 401970 300060 290590 460370 413440 374720 389390 414590 355090 316280 501600 444580 480430 278070 227060 314790 287800 294130 394980 306290 307770 456540 410840 390160 395290 417410 375160 331470 499910 424380 456410 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1355000000 11805 3838 11171 22582;22583;22584 18115;18116;18117;18118 18115 4 9606 Homo sapiens 0.023881917783000972 HGFCGIPITDTGR Unmodified 1429.6772 0.67723266 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5;B7Z1G4;Q6QE17 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 0 0 7.5 0.5 1 1 44.196 44.247 3 9.6146E-08 11176 20230619_1888_Aki_TMTPro18x_K_F8 119.39 92.679 131670 116430 121630 115410 121960 107310 116070 120600 158800 147300 134110 122610 135700 94120 136780 154210 133830 123410 121740 106580 124300 116660 126380 109600 118730 122980 158410 146680 138760 124680 138360 101280 139010 152220 128000 117580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 996010000 11806 1454 11172 22585;22586 18119;18120 18120 2 9606 Homo sapiens -0.020418868823071534 HGFEAASIK Unmodified 958.48723 0.48723027 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4;G1UI33;A0A8I5KSC2;A0A8I5KTT7;Q9UE82 MYH10 Myosin-10 yes no 0 0 0 6.5 0.5 1 1 40.27 40.35 3 0.00080653 9388 20230619_1887_Aki_TMTPro18x_K_F7 102.55 63.583 109700 72712 94040 94669 92790 112820 107970 109560 148400 124440 116790 133560 161730 122110 110860 172370 167890 158800 101200 66807 96832 94046 97081 112590 109210 112530 147630 125310 123330 134820 161190 129040 117110 171450 160030 151000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212460000 11807 3549 11173 22587;22588 18121 18121 1 9606 Homo sapiens 0.006326142376678945 HGFNQQTLGFFMK Unmodified 1553.7449 0.74491829 3318 O75844;A0A6Q8PHG9 ZMPSTE24 CAAX prenyl protease 1 homolog yes no 0 0 0 4.5 0.5 1 1 56.934 56.967 3 7.7059E-05 16665 20230619_1885_Aki_TMTPro18x_K_F5 106.26 94.818 33553 27277 30113 26981 26739 34457 37019 34356 41526 39185 29026 34223 35706 25959 31014 45483 35598 40241 30998 24976 30818 27400 28365 34275 36853 35226 41571 39191 30699 34681 35991 28100 31956 45048 34048 38259 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43180000 11808 3318 11174 22589;22590 18122 18122 1 9606 Homo sapiens -0.009804369514768041 HGFRQEYLDTLYR Unmodified 1696.8322 0.8321534 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;A0A7I2V3I2;H0YBP5;A0A7I2V4G3;E5RGA2;A0A7I2V5P9;A0A161SXE1;A0A7I2V570;A0A7I2V429;H0YBR5;A0A7I2V5K7 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 1 8 0 1 44.282 44.3 4 0.042619 11216 20230619_1888_Aki_TMTPro18x_K_F8 60.55 45.388 33995 37161 29513 29988 58286 179110 41274 44810 199540 19448 23211 23758 23117 19008 22830 29023 26532 26718 31466 33944 30935 32699 59108 166390 47268 54259 186650 21724 32030 23807 23682 20289 23460 28854 25351 25400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55035000 11809 1659 11175 22591 18123 18123 1 9606 Homo sapiens 0.011610605237819982 HGGEDYVFSLLTGYCEPPTGVSLR Unmodified 2653.2483 0.24825214 3411 Q8TBT6;P08574 CYC1 Cytochrome c1, heme protein, mitochondrial yes no 0 0 0 8 0 1 63.094 63.119 3 6.4269E-09 19117 20230619_1888_Aki_TMTPro18x_K_F8 114.63 97.945 12792 12794 14807 15042 13792 15458 16520 18420 26446 18178 13499 17208 20994 15730 20901 22767 18047 24374 11860 11725 14862 15019 14494 15668 16799 18599 25854 18371 14818 17461 21175 16662 21110 22846 17339 23110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 913920000 11810 3411 11176 22592 18124 18124 1 9606 Homo sapiens -0.012242060582138947 HGGENVAAVLR Unmodified 1121.5942 0.59415496 1903 A1L0T0;Q59GP4;E9PJS0;E9PL44 ILVBL Acetolactate synthase-like protein yes no 0 0 0 5.33 0.471 2 1 35.757 35.832 3 1.0991E-11 7866 20230619_1885_Aki_TMTPro18x_K_F5 172.56 127.81 146610 111060 135740 137640 146040 151140 134710 115200 147340 145690 162860 149570 160920 148920 186060 175890 168670 175800 135420 101930 138930 136980 150530 151030 136900 121090 150030 145800 166260 151750 165550 155010 187740 176350 161600 166950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 829130000 11811 1903 11177 22593;22594;22595 18125;18126 18125 2 9606 Homo sapiens 0.038221644520263 HGGFVYYQEGCCLVR Unmodified 1843.8134 0.81340856 3975 Q4J6C6-4;Q4J6C6-2;Q4J6C6-3;Q4J6C6;C9JMT4 PREPL Prolyl endopeptidase-like yes no 0 0 0 8 0 1 46.888 46.936 3 1.0638E-07 12253 20230619_1888_Aki_TMTPro18x_K_F8 129.37 128.18 102390 121230 234930 149380 236100 148130 249360 155270 84620 135520 206540 106360 80610 67433 413330 95938 84636 82759 95952 111100 227030 148740 243780 150380 245610 157880 100390 136930 200710 108320 101650 72361 394570 96238 84143 78751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106780000 11812 3975 11178 22596 18127 18127 1 9606 Homo sapiens -0.07474560433911392 HGGGGGGFGGGGFGSR Unmodified 1319.5755 0.57554478 2787 CON__P35908v2;CON__P35908;P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 3.67 3.09 1 1 1 33.066 33.085 3 3.8097999999999997E-19 7211 20230619_1880_Aki_TMTPro18x_K_F1 195.24 184.93 + 28398 22560 41527 45470 331070 54198 35507 46617 64264 29625 50139 50627 38892 131800 40050 29809 47307 40898 26354 20833 44972 44098 310640 54808 53822 47681 63572 31689 51612 53175 40786 127430 41045 32341 45149 38751 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 109960000 11813 2787 11179 22597;22598;22599 18128;18129;18130 18128 3 9606 Homo sapiens -0.0714599718980935 HGGLLGIK Unmodified 793.48102 0.48102268 3229 Q2M1V9;O14981;Q05C17 BTAF1 TATA-binding protein-associated factor 172 yes no 0 0 0 3 0 1 43.76 43.83 3 0.085412 11247 20230619_1882_Aki_TMTPro18x_K_F3 41.652 20.124 32436 27593 33530 40391 41764 45746 43520 38241 46738 41450 42662 41919 44102 36611 41911 43293 42555 41483 30009 25360 34140 39778 42766 45668 43857 39693 47264 41752 44027 42357 44855 38296 42699 43298 40703 39424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23712000 11814 3229 11180 22600 18131 18131 1 9606 Homo sapiens 0.07602140796802814 HGGQYMGQLK Oxidation (M) 1133.5288 0.52877751 1367 A7E2X7;A0AV47;A0A2R8YD63;Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes no 0 1 0 8 0 1 33.41 33.406 3 0.047468 6888 20230619_1888_Aki_TMTPro18x_K_F8 43.651 28.96 26267 15678 27595 26728 35520 36794 32338 35338 38755 17164 26328 29479 19639 19026 28527 14377 29190 21371 24258 14459 28033 26204 36167 36390 32988 35707 38536 18723 27343 29002 20702 19712 28805 14965 27868 20253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4967600 11815 1367 11181 22601 18132 18132 861 1 9606 Homo sapiens -0.03264573065325749 HGGTIPIVPTAEFQDR Unmodified 1736.8846 0.8845829 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;P00367-3;A0A804HJD7;B3KT18;A0A804HKE0;P00367-2;Q14400 GLUD1 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase yes no 0 0 0 5.5 0.5 1 1 48.619 48.697 3 6.3332E-11 13165 20230619_1885_Aki_TMTPro18x_K_F5 145.69 123.11 283250 229090 272940 289000 321970 324350 337910 305600 430660 292560 327490 315560 322900 275680 284660 321130 344590 335370 261820 210240 278940 287390 330890 324940 342460 313270 428900 297390 340530 318070 327990 288100 293640 322690 329060 318420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 994020000 11816 2542 11182 22602;22603 18133;18134 18133 2 9606 Homo sapiens 0.04561598866735039 HGGVIHIYVDK Unmodified 1236.6615 0.66150624 1482 Q14498;Q14498-2;B4E1M7;A0A384NQ03;Q68DD9;B3KWX7;B4DLM0;Q6N037;B4DRA0;E1P5S2;Q6MZY7;B7Z4L7;Q14498-3;Q7Z3L0;H0Y4X3 RBM39;DKFZp781C0423;DKFZp686A11192;RNPC2;DKFZp686C17209;DKFZp781I1140 RNA-binding protein 39 yes no 0 0 0 8 0 1 41.556 41.553 4 0.00038413 10115 20230619_1888_Aki_TMTPro18x_K_F8 106.29 71.284 77147 71259 69525 114340 87878 102450 64243 52179 229760 150440 172820 141420 176590 191620 65760 164210 120140 106720 71335 65548 71786 111580 89636 103330 71133 59520 222140 146920 179640 145750 175170 194280 72370 162020 114330 102020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253360000 11817 1482 11183 22604 18135 18135 1 9606 Homo sapiens 0.05264194662981936 HGGYKPSDEHK Unmodified 1253.5789 0.57889882 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;G3V4N7;G3V461 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 1 5.88 1.17 1 2 3 1 1 29.051 29.106 4;5 0.00025215 5620 20230619_1885_Aki_TMTPro18x_K_F5 118.28 95.558 151310 76442 209920 219440 237870 258700 221350 265430 171390 180400 310440 484390 266950 291710 323540 117420 503550 448710 140030 71231 208850 210100 244060 258450 222920 268470 182820 195800 311420 470420 277110 298010 336700 140020 479670 422880 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 597310000 11818 3441 11184 22605;22606;22607;22608;22609;22610;22611;22612 18136;18137;18138;18139;18140 18136 5 9606 Homo sapiens -0.03774747135821599 HGIEYQSK Unmodified 960.46649 0.46649483 928 F5H3P6;F5H3U5;B7Z5F3;A0A0A0MR51;O60427-2;O60427 FADS1 Fatty acid desaturase 1 yes no 0 0 0 6 0 1 34.243 34.29 3 0.0070791 7360 20230619_1886_Aki_TMTPro18x_K_F6 84.498 75.544 19705 9453.7 22481 22938 25511 30235 21510 23961 29218 18508 25072 33448 30166 29316 24100 20366 44978 37639 18194 8780.7 22654 22121 26176 29842 22169 24768 29131 19479 26192 33103 30390 29903 25737 21592 42782 35594 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21625000 11819 928 11185 22613 18141 18141 1 9606 Homo sapiens -0.015319761420073519 HGINFYDASLGTFGR Unmodified 1653.79 0.78995423 3274 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 yes yes 0 0 0 2 0 1 54.75 54.774 3 0.01503 16503 20230619_1881_Aki_TMTPro18x_K_F2 60.317 37.784 41623 38943 49361 38533 43087 56146 48573 45276 60239 44331 35678 42535 42460 35940 38380 60152 62189 59184 38582 35641 49350 39219 45462 55186 49011 46973 59709 44842 38108 43055 42976 38575 40532 59923 59251 56234 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103640000 11820 3274 11186 22614 18142 18142 1 9606 Homo sapiens -0.010789148846242824 HGIPTAQWK Unmodified 1036.5454 0.54541385 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2;F8WD69;C9JBJ1;C9JTV6;C9JZG2;C9JKQ7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 2.5 0.5 1 1 42.702 42.775 3 0.00037284 11099 20230619_1881_Aki_TMTPro18x_K_F2 109.48 91.039 438120 366230 417930 404720 425380 519750 447230 475200 555390 408290 440620 416800 455960 356670 441750 367400 466990 380720 405010 335630 426300 407240 442450 515750 453090 486590 554650 416760 458020 420730 464030 370640 450380 370100 445970 361780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 492520000 11821 3488 11187 22615;22616 18143;18144 18143 2 9606 Homo sapiens 0.028602958829424097 HGIVEDWDLMER Unmodified 1498.6875 0.68746299 622 P61158;A0A024RAI1;Q59FV6;B4DXW1;B4DT29;F8WDR7 ACTR3 Actin-related protein 3 yes no 0 0 0 2.5 0.5 1 1 53.392 53.433 3 3.3991E-13 15934 20230619_1881_Aki_TMTPro18x_K_F2 169.89 156.23 94266 63181 81196 87159 81689 91179 80302 86237 115450 86091 81375 73179 85867 71295 82226 104190 90485 82122 86967 58084 83598 86084 84887 91763 82145 88426 114210 86697 85232 74899 87340 75331 84253 102870 86438 78264 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171920000 11822 622 11188 22617;22618 18145;18146 18145 2 9606 Homo sapiens -0.04193323947720273 HGLAHDEMK Oxidation (M) 1052.4709 0.47092828 1525 A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 0 1 0 3.5 0.5 1 1 27.74 27.837 3 0.03096 4857 20230619_1882_Aki_TMTPro18x_K_F3 51.995 31.094 2892.5 1040.9 2546.2 2594.1 2930.7 3211.5 2032.5 2949.8 5434.5 1985 3641.6 3675.1 2916.4 3613 3189.9 1391.6 3923.5 3344.6 2662.6 969.37 2620.2 2497.3 2998.3 3191.2 2207.7 3004.1 5257.3 2117.7 3787.7 3649.9 3021.6 3608.1 3268.8 1550.6 3742.9 3158.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1891500 11823 1525 11189 22619;22620 18147 18147 1008 1 9606 Homo sapiens -0.05320834990766343 HGLAHDEMK Unmodified 1036.476 0.47601365 1525 A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 0 0 0 3.5 0.5 1 1 30.821 30.895 4 0.000411 5942 20230619_1882_Aki_TMTPro18x_K_F3 120.12 63.39 69062 45784 66794 68641 78727 77460 62447 56349 120630 82808 99109 85958 99464 91888 66655 85071 105450 79363 63767 42134 68202 67514 80452 77188 65681 59766 118610 82524 102540 87349 100040 94185 70586 85251 100340 75536 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102700000 11824 1525 11189 22621;22622 18148 18148 1 9606 Homo sapiens -0.04076531128134775 HGLEAISIMDSR Oxidation (M) 1343.6503 0.65034921 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1 VARS Valine--tRNA ligase yes no 0 1 0 4.5 0.5 1 1 41.368 41.432 3 0.00089657 10136 20230619_1883_Aki_TMTPro18x_K_F4 86.592 72.434 111580 125490 118190 122150 155760 158650 158920 144470 204220 123090 157490 154360 134620 128900 130400 133890 161490 148100 103470 114770 120110 124180 158840 157430 161330 148030 203280 126670 162750 154460 138070 134000 134400 135270 154120 140570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 279300000 11825 725 11190 22623;22624 18149;18150 18149 438 2 9606 Homo sapiens -0.007729954934575289 HGLEAISIMDSR Unmodified 1327.6554 0.65543458 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1 VARS Valine--tRNA ligase yes no 0 0 0 5.5 0.5 1 1 47.644 47.723 3 3.3326E-10 12740 20230619_1885_Aki_TMTPro18x_K_F5 187.58 172.88 103900 85333 93443 99029 98965 124370 113740 109360 157860 81191 78322 77464 83891 67410 85749 86607 89175 91689 95997 78243 95937 99222 102980 123460 115100 112010 154910 83623 84351 78511 85552 70919 87356 87003 85306 87023 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 405620000 11826 725 11190 22625;22626 18151;18152 18151 2 9606 Homo sapiens 0.00471308369151302 HGLEETAAK Unmodified 954.47706 0.47705951 2846 D6RCD0;Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes no 0 0 0 3.5 0.5 1 1 33.949 34.009 3 4.233E-05 7125 20230619_1883_Aki_TMTPro18x_K_F4 130.75 106.72 40433 21843 42557 48761 63467 72215 54053 53151 68463 51284 65020 80970 51447 57157 59511 41372 69091 66617 37324 20242 43411 47258 64050 70744 55476 55575 68724 52870 66398 79934 53422 58859 60797 43314 65996 63015 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70006000 11827 2846 11191 22627;22628 18153 18153 1 9606 Homo sapiens -0.0019999348756982727 HGLEQYLSR Unmodified 1101.5567 0.55670682 1654 A0A7I2V377;A0A7I2V518;P49069 CAMLG Calcium signal-modulating cyclophilin ligand yes no 0 0 0 7.5 0.5 1 1 41.846 41.88 3 2.5776E-06 10259 20230619_1888_Aki_TMTPro18x_K_F8 157.96 87.928 55488 45445 55601 62098 69563 77979 78741 66268 68848 62096 64583 62564 63507 53694 65241 61291 72215 64836 51310 41739 56739 61522 71359 77358 78511 68430 70518 63010 66430 63199 64939 56092 66669 61687 68977 61571 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36707000 11828 1654 11192 22629;22630 18154;18155 18155 2 9606 Homo sapiens 0.009990731864036206 HGLEVIYMIEPIDEYCVQQLK Oxidation (M) 2592.2604 0.26039673 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 1 0 6 0 1 62.144 62.195 4 0.017111 19107 20230619_1886_Aki_TMTPro18x_K_F6 56.149 43.091 38340 34185 34307 38784 37532 30313 33737 44255 43489 36957 39497 38658 39639 37616 43598 53196 45204 51810 35441 31329 35240 38704 38567 31654 34573 44030 43583 37786 40724 39184 40675 39641 44410 53094 43281 49200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136890000 11829 3177 11193 22631 18156 18156 1842 1 9606 Homo sapiens 0.027956943606113782 HGLEVIYMIEPIDEYCVQQLK Unmodified 2576.2655 0.2654821 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 7 0 1 63.233 63.266 4 7.2363E-12 19318 20230619_1887_Aki_TMTPro18x_K_F7 140.28 125.82 111590 79951 99422 113050 77920 96109 95685 95237 116800 130280 115570 133990 149930 144940 118090 179900 136230 179050 103010 73500 101770 111190 83257 98415 96145 98341 117870 129920 120240 136240 150550 150930 122000 179980 130470 169910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1298400000 11830 3177 11193 22632 18157 18157 1 9606 Homo sapiens 0.040399982232429466 HGLINFGIYK Unmodified 1160.6342 0.63422886 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5QJR3;A0A8I5KV76;A0A8I5KRF4;A0A8I5KSH0;A0A8I5KVZ4;A0A8I5KQU6;A0A8I5KRC9;A0A8I5KTR5;A0A8I5KPV0 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 0 4.5 0.5 1 1 53.796 53.838 3 0.0020332 15723 20230619_1883_Aki_TMTPro18x_K_F4 71.451 46.597 84757 80666 85092 80672 87106 132960 99158 91480 141500 68018 69317 76429 78495 63537 73024 82474 79189 82351 78455 73829 86470 82175 91009 129460 100510 95694 138640 70451 74963 76795 79585 66976 74745 82539 75730 78207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194400000 11831 1785 11194 22633;22634 18158 18158 1 9606 Homo sapiens 0.0603371112260902 HGLLVPNNTTDQELQHIR Unmodified 2084.0763 0.076299846 3667 P56537;B7ZBH1 EIF6 Eukaryotic translation initiation factor 6 yes no 0 0 0 5.5 0.5 1 1 43.907 43.993 4 3.4943E-30 11218 20230619_1886_Aki_TMTPro18x_K_F6 176.23 162.82 729680 496350 518780 709080 699480 988160 761220 669670 1061300 880520 990150 1217000 1079700 970970 909320 1086200 1344000 1185800 672390 456460 548760 701410 716730 969940 772550 712180 1060800 889590 1024500 1211100 1092000 1015400 952510 1094800 1280700 1125800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3419699999.9999995 11832 3667 11195 22635;22636 18159;18160;18161 18160 3 9606 Homo sapiens 0.07762474827086407 HGLTEELLSR Unmodified 1153.6091 0.60913632 895 H0YJP0;A0A8I5QJU2;A0A087X2H1;Q9ULT8;A0A8I5KUD6;A0A8I5KU01;H0YJD4;G3V4V5 HECTD1 E3 ubiquitin-protein ligase HECTD1 yes no 0 0 0 4 0 1 43.524 43.568 3 3.8653E-07 11079 20230619_1883_Aki_TMTPro18x_K_F4 129.88 112.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11833 895 11196 22637 18162 18162 1 9606 Homo sapiens 0.038476115293633484 HGLTEPER Unmodified 937.46174 0.4617438 1686 A0A7P0TA34;A0A7P0T7Z2;Q9Y6D5;A0A7P0T9L6;Q86TH5;A0A7P0T9L9 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes no 0 0 0 2 0 1 26.839 26.916 3 0.0081249 4592 20230619_1881_Aki_TMTPro18x_K_F2 72.23 55.134 3061.8 1184.3 3980.4 3340.1 4818.2 4243.4 3471 4078.9 5642.6 4272.4 4346.6 3897 4851.2 3971.4 5050.5 2928.6 5797.8 4722.4 2828.9 1105.1 3973.4 3205.1 4895.8 4217.1 3647 4180.3 5572.4 4300 4540.1 3973.6 4944.8 4043.8 5160.6 3067.4 5532.7 4470.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3320600 11834 1686 11197 22638 18163 18163 1 9606 Homo sapiens -0.00948860284768216 HGLVPFAFVR Unmodified 1141.6396 0.63964859 3844 Q13242;A8K3M9;H0YIB4;S4R3G0;B4DFT9 SRSF9 Serine/arginine-rich splicing factor 9 yes no 0 0 0 5.5 0.5 1 1 53.282 53.356 3 0.00099806 15341 20230619_1886_Aki_TMTPro18x_K_F6 93.701 79.494 76581 72387 70876 62264 65403 75431 74192 78022 89951 41093 37889 46175 49708 37319 43572 49629 45722 50945 70837 66178 72340 63987 68665 75379 74776 78526 88528 43739 41905 46364 50062 39461 44567 49728 43762 48355 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 192110000 11835 3844 11198 22639;22640 18164;18165 18165 2 9606 Homo sapiens 0.0744943470506314 HGLYLPTR Unmodified 955.52395 0.52395013 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 3.5 0.5 1 1 38.352 38.4 3 0.00019879 8907 20230619_1882_Aki_TMTPro18x_K_F3 138.83 104.57 102090 89954 92566 89163 69879 91688 85361 79379 94622 56825 52195 42744 47839 40022 79031 57632 63386 32098 94369 82346 94466 90211 74943 92258 85468 81387 94059 58293 55370 44008 50456 42277 78821 56285 60582 30872 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205500000 11836 3606 11199 22641;22642 18166 18166 1 9606 Homo sapiens 0.044409108542254216 HGLYNLK Unmodified 843.46029 0.46028724 3471 P18065;C9JMY1 IGFBP2 Insulin-like growth factor-binding protein 2 yes no 0 0 0 2 0 1 40.867 40.94 3 0.037011 10270 20230619_1881_Aki_TMTPro18x_K_F2 66.138 7.157 182100 119550 140180 165720 174090 164750 155260 159720 191510 155800 158960 148310 152960 138510 154660 181550 174540 142580 167850 109920 146490 163490 177590 166600 158760 163440 191700 157520 164310 150680 156490 145380 158480 179510 166590 135960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91184000 11837 3471 11200 22643 18167 18167 1 9606 Homo sapiens 0.03229550417120208 HGNALWLNER Unmodified 1208.6051 0.60505399 1263 A0A1B0GWA1;A0A1B0GUX9;A0A1B0GWI4;A0A1B0GU58;B2RDE0;P05165-3;P05165-2;P05165 PCCA Propionyl-CoA carboxylase alpha chain, mitochondrial yes no 0 0 0 7 0 1 39.775 39.84 3 0.0035142 9180 20230619_1887_Aki_TMTPro18x_K_F7 65.395 49.733 30373 26916 34101 32678 42166 44335 40232 37727 47260 31101 36818 35314 35680 30544 37816 25680 36477 34138 28129 24684 34444 32683 43087 43799 40882 38825 47279 31952 38216 35491 36554 31418 38272 26403 34898 32343 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19629000 11838 1263 11201 22644 18168 18168 1 9606 Homo sapiens 0.00909566826317132 HGNIQVSCVECSNQQGR Unmodified 1971.8639 0.86394058 360 A0A024R5V2;H0YLM8;Q8TDJ6-2;Q8TDJ6;Q8TDJ6-3 DMXL2 DmX-like protein 2 yes no 0 0 0 5 0 1 33.591 33.676 3 1.6777E-09 7046 20230619_1885_Aki_TMTPro18x_K_F5 136.81 133.09 2355.9 2107.6 2539.7 2771 3647.9 2709.6 1528.9 2316.2 3513.3 2864.5 3771.9 3708 3112.7 3248.4 2821.1 2530.6 6253.1 2774.6 2181.1 1934.3 2579.2 2742.3 3638.6 2739.5 1729.7 2407.3 3475.8 2893.4 3826.7 3708.6 3192.3 3324.7 3059.7 2570.5 5925.6 2645.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11739000 11839 360 11202 22645 18169 18169 1 9606 Homo sapiens -0.08311682846851909 HGNLCLDK Unmodified 955.45455 0.45454993 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2;O15294-4 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 0 6.5 0.5 1 1 37.958 38.028 3 0.0017608 8738 20230619_1886_Aki_TMTPro18x_K_F6 102.07 60.191 118960 96119 119700 116110 140060 144200 132350 118320 176030 134850 150340 130510 140410 111880 133610 137140 179020 148150 109990 88172 121800 115990 143650 143130 135190 123130 175700 135390 154870 132120 143310 117430 138490 138010 170640 140710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136150000 11840 1842 11203 22646;22647 18170;18171 18170 2 9606 Homo sapiens -0.024959161568290256 HGNQYIQVNEPWK Unmodified 1611.7794 0.77938954 2037 A8K492;P56192;B4DF61 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 0 0 8 0 1 47.609 47.667 3 3.9105E-06 12547 20230619_1888_Aki_TMTPro18x_K_F8 130.44 115.05 146820 127360 158750 176460 102460 155110 140560 150440 190320 221370 213650 201070 225630 192600 208500 237660 215530 251080 135900 116970 159560 173840 112280 158240 141180 155920 192130 219290 218530 204790 229070 201400 212890 238760 206400 238200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 483960000 11841 2037 11204 22648 18172 18172 1 9606 Homo sapiens -0.0020289753902034136 HGPATGPQGVPEVR Unmodified 1400.7161 0.71606101 803 A0A087WT53;V9P4H4;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 yes no 0 0 0 5 0 1 34.304 34.391 3 3.0151E-07 7283 20230619_1885_Aki_TMTPro18x_K_F5 139.73 109.54 20437 12880 21485 21427 32696 36263 27507 29027 29543 21590 33561 26945 26248 22338 31059 16575 25895 21572 18879 11872 21908 21113 32933 35357 28102 29939 30098 22397 33889 26971 27235 22892 31131 17083 24796 20452 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55370000 11842 803 11205 22649 18173 18173 1 9606 Homo sapiens 0.03173161743757191 HGRPGIGATHSSR Unmodified 1331.6807 0.68067855 984 K7EM56;A0A0B4J2B4;S4R417;K7EQJ5;K7ELC2;P62841 RPS15 40S ribosomal protein S15 yes no 0 0 1 2.5 0.5 1 1 22.919 23.03 4 0.060227 3739 20230619_1881_Aki_TMTPro18x_K_F2 54.898 37.572 16981 15099 21812 22472 25786 27875 29024 27347 23556 22607 25682 21494 24434 20793 25312 19793 41497 23812 15748 13877 21826 22152 26516 27755 28906 27847 24388 23066 26178 21860 25039 21429 26575 20152 39425 22639 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13873000 11843 984 11206 22650;22651 18174 18174 1 9606 Homo sapiens 0.028105440065928633 HGSLGFLPR Unmodified 982.53485 0.53484916 3567;2399 B3KS36;B4DN06;F8WCR1;P39023;Q96QL0;H7C422;H7C3M2 RPL3 60S ribosomal protein L3 no no 0 0 0 5.67 1.25 1 1 1 40.206 40.276 3 9.2606E-05 10090 20230619_1887_Aki_TMTPro18x_K_F7 139.74 98.31 120000 86815 116140 115980 132150 149430 140740 121180 148480 98303 100810 118180 114840 86500 120800 110710 120610 109880 110850 79756 118560 115140 136250 147880 141570 125210 148800 101280 106460 117970 116990 91583 122660 110860 115330 104410 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 228280000 11844 2399;3567 11207 22652;22653;22654 18175;18176;18177 18177 3 9606 Homo sapiens 0.04288313228516927 HGSNIEAMSK Oxidation (M) 1088.4921 0.49205765 2058 A8K4W5;Q59GW6;Q9BWD1;Q9BWD1-2 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes no 0 1 0 8 0 1 30.129 30.145 3 0.0093953 5689 20230619_1888_Aki_TMTPro18x_K_F8 67.153 57.498 8493.8 6277.8 8713.6 7234.1 9659.5 7889.8 5915.7 8230.4 9552.9 9597.1 11968 9417.1 7634.9 8228.2 9936.2 7176 10808 8397.9 7850.9 5758.2 8830.8 7242.3 9844.3 7946 6309 8413.2 9620.6 9619.5 11959 9530.3 8050.2 8465.7 10095 7307.6 10316 7972.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9435600 11845 2058 11208 22655 18178 18178 1290 1 9606 Homo sapiens -0.04864869681887285 HGSYEDAVHSGALND Unmodified 1570.6648 0.6648133 3470 P17987;E7EQR6;F5H282 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 2 0.816 2 2 2 32.818 32.861 3;4 1.3046E-10 6812 20230619_1881_Aki_TMTPro18x_K_F2 153.81 149.71 41464 33372 46875 49370 49038 63975 59969 54316 19851 42878 37798 63715 56079 31611 65656 62245 83299 82229 38379 30681 47239 48707 51011 63310 58614 55877 23339 44482 38986 62595 57026 35377 67542 63161 79522 77893 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1401300000 11846 3470 11209 22656;22657;22658;22659;22660;22661 18179;18180 18180 2 9606 Homo sapiens -0.09769251811599133 HGVDHQVISVTFEK Unmodified 1594.8104 0.81035532 1555 A0A499FI31;Q15020;A0A9E8DG70;B4DRG9;B4E3R6 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 0 6.5 0.5 1 1 44.65 44.736 4 0.0010988 11249 20230619_1887_Aki_TMTPro18x_K_F7 85.42 52.011 46408 31639 42638 42867 47895 46941 43741 45742 68169 53826 64765 52852 59196 54469 52744 55044 61110 56678 42839 29078 43694 42421 49234 47141 45106 47020 67867 53985 66264 53795 60318 56151 54220 55399 58358 53832 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 353940000 11847 1555 11210 22662;22663 18181 18181 1 9606 Homo sapiens 0.03674255775194979 HGVDVEVQGPHEAR Unmodified 1528.7383 0.73825301 1782 A0A8I5KZ07;Q5JR04;A0A8I5KXC3;Q9HCE1-2;Q9HCE1;Q9H8T8;A0A8I5QKW4 MOV10 Putative helicase MOV-10 yes no 0 0 0 2.5 0.5 1 1 31.519 31.589 4 6.9592E-17 6327 20230619_1881_Aki_TMTPro18x_K_F2 173.06 154.28 29580 18436 30833 34137 51373 50686 43401 42683 62314 39275 50531 49003 50382 42113 40101 44137 47136 42802 27321 17019 31544 33363 51504 49799 44775 44059 61862 40229 52361 49087 50938 43767 41367 44245 45002 40684 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86584000 11848 1782 11211 22664;22665 18182;18183 18182 2 9606 Homo sapiens -0.004966585785041389 HGVESTLER Unmodified 1026.5094 0.50942227 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 2.5 0.5 2 2 30.48 30.559 2;3 1.1038E-06 5804 20230619_1882_Aki_TMTPro18x_K_F3 166.07 117.27 59459 50323 52042 56092 67623 69675 60260 65170 73454 68395 63457 61503 67067 52520 51030 66050 70711 60135 54935 46119 53732 56364 68810 69348 61600 66943 73717 68747 65700 62445 67565 55208 53337 65785 67392 57218 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 296720000 11849 1676;2901 11212 22666;22667;22668;22669 18184;18185 18185 2 9606 Homo sapiens -0.0027720608457002527 HGVHMMVATPGR 2 Oxidation (M) 1323.6176 0.61760929 2396 B3KRK2;Q53HI2;Q9UJV9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes no 0 2 0 1 0 1 25.169 25.169 4 0.001183 4261 20230619_1880_Aki_TMTPro18x_K_F1 79.693 70.26 0 2090.1 0 0 1390.7 1771.6 0 1651.8 1138.4 778 1094 1059.8 1360.4 0 1169.8 1110 1247.9 871.95 0 1891.1 0 0 1302.1 1658.5 0 1664.3 1093.8 840.31 1135.1 1029 1363 0 1196.6 1084 1190.6 832.08 0 1 0 0 1 1 0 1 1 1 1 1 1 0 1 1 1 1 801010 11850 2396 11213 22670 18186 18186 1474;1475 1 9606 Homo sapiens -0.03125481097322336 HGVIVAADSR Unmodified 1023.5461 0.54614213 3517 P28074;P28074-2;H0YJM8 PSMB5 Proteasome subunit beta type-5 yes no 0 0 0 4.5 1.12 1 1 1 1 31.101 31.166 3 2.925E-07 6077 20230619_1885_Aki_TMTPro18x_K_F5 142.92 118.58 51463 33180 58907 59087 66892 70914 56694 61782 147320 58314 69817 68701 70783 55320 62423 55820 74686 66544 47580 30608 59329 57654 68732 70566 60490 63646 141540 59656 75260 68812 71830 57565 64256 56716 71284 63120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 278950000 11851 3517 11214 22671;22672;22673;22674 18187;18188 18188 2 9606 Homo sapiens 0.03531090531987502 HGVVPLATYMR Oxidation (M) 1258.6492 0.64922699 3593 Q6IAX2;P46778;M0R181;G3V1B3;Q59GK9 RPL21 60S ribosomal protein L21 yes no 0 1 0 2.33 0.471 2 1 39.406 39.467 3 0.015531 9377 20230619_1882_Aki_TMTPro18x_K_F3 60.691 52.586 45715 36571 40824 41554 58178 70231 57135 46910 77769 25277 30610 26071 28600 22368 31762 27068 31713 26473 42228 33529 42158 41918 59123 68287 58222 48974 75997 26865 33513 26347 29415 23452 32211 27110 30307 25170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222130000 11852 3593 11215 22675;22676;22677 18189;18190 18190 2263 2 9606 Homo sapiens 0.030248349282828713 HGVVPLATYMR Unmodified 1242.6543 0.65431237 3593 Q6IAX2;P46778;M0R181;G3V1B3;Q59GK9 RPL21 60S ribosomal protein L21 yes no 0 0 0 3.5 0.5 1 1 45.179 45.239 3 6.4389E-05 11832 20230619_1883_Aki_TMTPro18x_K_F4 103.08 88.848 159540 153380 123390 112730 175280 285900 163390 165300 272190 78416 73276 74580 79760 67550 79001 88174 94765 68179 147400 140070 129190 119540 178700 273040 168570 174720 262590 84325 84817 75748 81292 70974 81256 87141 90334 65066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 471000000 11853 3593 11215 22678;22679 18191 18191 1 9606 Homo sapiens 0.04269138790891702 HGVYNPNK Unmodified 927.45626 0.45626449 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 5.33 3.09 1 1 1 32.175 32.207 3 0.00085137 6865 20230619_1880_Aki_TMTPro18x_K_F1 120.65 96.673 224470 111090 319410 299980 462070 476030 328680 421800 348620 145780 263640 224040 161000 168830 353200 83201 241880 147680 207770 103390 318520 289360 464560 466320 340040 426910 349880 164750 270110 222210 176850 171330 348080 89540 231850 139930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 495240000 11854 297 11216 22680;22681;22682 18192;18193;18194 18192 3 9606 Homo sapiens -0.010365390765741722 HGYEKPTPIQTQAIPAIMSGR Unmodified 2294.1841 0.18413574 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 1 3 0 1 49.582 49.66 4 4.0599E-08 13971 20230619_1882_Aki_TMTPro18x_K_F3 116.35 92.548 50709 41851 49315 49910 46146 61074 56216 51612 58729 60720 59076 56452 58398 52612 61172 59317 55244 49365 46881 38383 50184 49890 48529 60673 56175 53630 59719 60757 60567 57371 59764 54726 61816 58965 52874 47014 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165330000 11855 1002 11217 22683 18195 18195 1 9606 Homo sapiens 0.08881103366184107 HGYIGEFEIIDDHR Unmodified 1699.7954 0.79543354 3065;2214 H3BN98;I3L246;I3L3P7;B2R4W8;P62244;A8K7H3 RPS15A;hCG_1994130 40S ribosomal protein S15a no no 0 0 0 3.25 1.48 1 1 1 1 48.187 48.236 4 8.4891E-17 13308 20230619_1882_Aki_TMTPro18x_K_F3 213.99 195.97 139530 97147 115210 130190 110310 121870 113230 102390 206910 178610 146350 122630 159920 146720 120920 188500 139660 139340 128720 89266 119050 128610 115320 123440 116830 108030 203080 174920 153350 127930 161050 152700 125060 185820 133440 132870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 940530000 11856 3065;2214 11218 22684;22685;22686;22687 18196;18197;18198 18197 3 9606 Homo sapiens -0.02647236092775529 HGYIPGK Unmodified 770.40752 0.40752338 676 Q9ULV4-3;Q9ULV4-2;Q9ULV4;Q59EA2;A0A024RBI5;B3KN06;Q53G58;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 CORO1C Coronin-1C;Coronin yes no 0 0 0 1.5 0.5 1 1 38.213 38.245 3 0.062521 9002 20230619_1881_Aki_TMTPro18x_K_F2 54.525 32.394 388080 282720 343310 367430 394350 417580 394060 369610 515890 495450 576340 555460 551560 442570 519810 507460 665580 584760 358260 259640 353350 364690 405750 417410 401090 384370 520940 495900 587190 557300 562140 463900 537060 513300 634860 554880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 464950000 11857 676 11219 22688;22689 18199;18200 18199 2 9606 Homo sapiens 0.013135923543245553 HGYPLIIYDVFPDACK Unmodified 1906.9288 0.9287559 611 P31937;A0A024RA75 HIBADH 3-hydroxyisobutyrate dehydrogenase, mitochondrial;3-hydroxyisobutyrate dehydrogenase yes no 0 0 0 1 0 1 62.498 62.498 3 0.0085303 19516 20230619_1880_Aki_TMTPro18x_K_F1 65.092 55.687 11775 9493.8 13382 16368 14609 15656 14623 18443 18598 14509 14567 18993 17816 18021 18616 19811 21056 19698 10899 8745.5 13496 15945 15075 15938 14874 18537 18556 15014 15314 19041 18145 18699 19056 19873 20113 18716 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13874000 11858 611 11220 22690 18201 18201 1 9606 Homo sapiens 0.0115686696872217 HHCPHTPILLVGTK Unmodified 1608.8559 0.85586573 3680 P60763;J3KSC4;J3QLK0 RAC3 Ras-related C3 botulinum toxin substrate 3 yes no 0 0 0 3 0 1 38.448 38.501 4 8.7421E-08 8948 20230619_1882_Aki_TMTPro18x_K_F3 114.72 99.93 58184 24014 43677 53216 50557 42220 50869 50795 73677 55411 63842 62563 74829 58392 47458 75437 57563 67554 53523 22290 45714 51147 51950 43713 51964 51448 73320 56010 66391 63096 74691 61277 49459 75008 55047 64210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23792000 11859 3680 11221 22691 18202;18203 18202 2 9606 Homo sapiens 0.07579202756596715 HHCPNTPIILVGTK Unmodified 1585.8399 0.83988131 1881 A4D2P1;A4D2P0;A0A994J6T1;P63000;P63000-2;A4D2P2;A0A024R9T5 RAC1;hCG_20693 Ras-related C3 botulinum toxin substrate 1 yes no 0 0 0 2.5 0.5 1 1 41.759 41.829 4 9.6291E-06 10396 20230619_1882_Aki_TMTPro18x_K_F3 119.01 103.48 247310 81244 150750 205040 222800 109690 190900 201070 266220 247080 282630 314330 420570 278710 128350 424940 185970 314160 227080 75740 162370 195450 224180 120430 196650 200440 267720 249250 294990 315110 410380 296510 140560 417560 178270 299090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 433040000 11860 1881 11222 22692;22693 18204 18204 1 9606 Homo sapiens 0.0703949651970106 HHGPQTLYLPVTLSSIPVFQR Unmodified 2389.2906 0.29064972 3900;2497;4425 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2;Q9BS14 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 6.5 0.5 1 1 60.571 60.621 4 1.6111E-16 18056 20230619_1887_Aki_TMTPro18x_K_F7 162.42 147.43 22723 15965 22265 20606 29916 22665 28657 28529 28828 22809 25838 18872 24316 19900 26125 24360 23196 24189 20989 14664 22750 20469 30345 22921 28968 28578 29223 23242 26546 19412 24943 20739 26364 24404 22229 22973 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 567700000 11861 3900;2497;4425 11223 22694;22695 18205 18205 1 9606 Homo sapiens 0.15157601923010589 HHIETGGGQLPAK Unmodified 1343.6946 0.69459728 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 6.33 0.471 2 1 33.855 33.916 3;4 8.717E-06 6864 20230619_1887_Aki_TMTPro18x_K_F7 122.7 107.13 28233 7390.8 19209 23669 31646 16996 26707 30491 37163 29032 39383 40744 47322 38381 19063 46289 27022 36264 25926 6943.7 20454 22457 31654 18017 27537 30174 37330 29779 40609 40785 46685 40066 20478 45752 25841 34516 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58485000 11862 2863 11224 22696;22697;22698 18206;18207 18207 2 9606 Homo sapiens 0.03649776715042208 HHLGAATPENPEIELLR Unmodified 1895.9854 0.98535957 819 Q6IB68;A0A087WV05;Q99417 MYCBP C-Myc-binding protein yes no 0 0 0 4 0 1 43.891 43.935 4 1.6134E-13 11214 20230619_1883_Aki_TMTPro18x_K_F4 160.04 151.53 25990 24344 23102 23084 25225 26651 25170 30782 39097 28013 30060 28035 33456 30999 29549 32450 30302 30090 24032 22273 23737 23490 26058 26791 25819 31063 38649 28485 31395 28581 33872 31942 30173 32451 28984 28606 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28469000 11863 819 11225 22699 18208 18208 1 9606 Homo sapiens 0.07320630849631016 HHLQPENPGPGGAAPSLEQNR Unmodified 2205.0675 0.067526074 3896 Q14684;Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 0 4.5 0.5 1 1 34.41 34.479 4 1.9387E-22 7353 20230619_1885_Aki_TMTPro18x_K_F5 175.52 171.2 16566 6495.6 12666 14277 16899 17133 16331 20196 21553 19347 22045 23874 24473 19140 15432 27259 20860 20194 15238 6030.6 13263 13805 17210 17165 16667 20381 21677 19732 22699 23882 24462 20319 16217 26833 19902 19258 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 89995000 11864 3896 11226 22700;22701 18209;18210 18210 2 9606 Homo sapiens 0.013195011905736465 HHNQPYCGIAPYIR Unmodified 1724.8205 0.82054285 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-3 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 0 2.5 0.5 1 1 38.357 38.416 4 2.0372E-08 8961 20230619_1882_Aki_TMTPro18x_K_F3 148.78 137.5 102810 50517 86336 88474 93748 97597 99461 112700 117670 88144 91900 86738 113080 105920 81621 128130 105860 99414 94698 46659 89188 86323 96961 98285 100540 113380 117760 90417 96365 88915 113350 109710 85145 126670 101000 94752 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147320000 11865 33 11227 22702;22703 18211;18212 18212 2 9606 Homo sapiens -0.012874597711970637 HHPDLIFCR Unmodified 1193.5764 0.5763964 163 A0A024R1U2;Q7RTV0 PHF5A PHD finger-like domain-containing protein 5A yes no 0 0 0 7.5 0.5 1 1 36.728 36.755 3 2.4202E-06 7974 20230619_1887_Aki_TMTPro18x_K_F7 176.6 137.58 161660 85771 132400 156900 151190 157460 153790 152800 212410 153660 176360 173700 169050 142710 152730 167290 206950 192370 148930 79235 137340 152470 155730 158990 156690 156490 211420 155980 182270 174400 172060 149560 158660 169080 197380 182500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147640000 11866 163 11228 22704;22705 18213;18214 18213 2 9606 Homo sapiens -0.012648740744907627 HHPEDVEPALR Unmodified 1298.6367 0.63674805 3450 V9HWI0;P14550;Q5T621;V9GYG2;V9GYP9 HEL-S-165mP;AKR1A1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 2 0 1 30.322 30.389 4 6.3348E-05 5861 20230619_1881_Aki_TMTPro18x_K_F2 112.75 99.827 42246 15978 29786 37219 52466 27012 39524 49777 60046 41517 58494 51340 52667 51415 31588 44375 39926 50061 38837 14854 31637 35689 52182 28653 41243 49034 59872 42717 59735 51713 52975 52632 33028 44997 38190 47451 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 17316000 11867 3450 11229 22706 18215;18216;18217 18216 3 9606 Homo sapiens -0.0006248521037832688 HHPEDVEPALRK Unmodified 1426.7317 0.73171107 3450 V9HWI0;P14550;Q5T621;V9GYG2;V9GYP9 HEL-S-165mP;AKR1A1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 1 4 0.816 1 1 1 33.098 33.168 5 0.0016681 6790 20230619_1883_Aki_TMTPro18x_K_F4 77.744 71.085 128760 30895 100280 106490 151930 85394 126960 136410 155930 125300 178980 178010 165490 145910 95398 165670 139470 159470 118320 29113 104940 100970 152510 89185 130370 135540 157980 128810 181810 177320 166040 152520 101080 165620 133160 151460 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 77871000 11868 3450 11230 22707;22708;22709 18218;18219 18218 2 9606 Homo sapiens 0.035414482607848186 HHPQVLSMK Oxidation (M) 1091.5546 0.55459833 3534;2560 B4DP06;H7C1S2;V9HWH7;P31939;B2R7P8;P31939-2 ATIC;HEL-S-70p Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 1 0 3.67 3.09 1 1 1 30.084 30.112 3;4 0.0062009 6001 20230619_1880_Aki_TMTPro18x_K_F1 81.594 53.852 61536 22027 54654 65205 78942 59382 61403 62722 71425 49179 57537 50576 47299 43142 52104 52872 63223 46328 56648 20590 56476 62131 79416 60554 63237 63506 71585 50501 59202 51077 48869 45235 53509 52615 60267 44134 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77049000 11869 2560;3534 11231 22710;22711;22712 18220;18221 18220 1553 2 9606 Homo sapiens 0.012483211769676927 HHVLGTITTDK Unmodified 1220.6513 0.65133548 1037;1668 A0A0G2JN29;Q15155;A0A0G2JP90;A0A7I2V4D7;A0A7I2V4T6;A0A7I2V6B0;J3KN36;Q5JPE7-2;P69849;Q5JPE7;A0A7I2V3P4;A0A7I2V2Z5;Q5JPE7-3;Q1LZN2 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 2;Nodal modulator 3 no no 0 0 0 8 0 1 36.512 36.499 3 8.637E-05 8071 20230619_1888_Aki_TMTPro18x_K_F8 101.39 88.767 26243 13337 21523 26399 33255 25647 27267 30718 34257 27484 33844 34672 36043 29023 27939 40899 29832 35579 24173 12339 22447 25555 33388 26114 28059 30939 34471 28171 34834 34712 36318 30743 28733 40572 28565 33828 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18247000 11870 1037;1668 11232 22713 18222 18222 1 9606 Homo sapiens 0.049835869377375275 HHYEQQQEDLAR Unmodified 1552.7019 0.7018675 1005;1857 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y7I0;Q8TDI0;A0A2R8Y5M9;K7EMY3;Q659D0;Q659F1;A0A2R8YE38;B3KRD4;Q6ZU36;A0A8V8TR54;Q12873;Q12873-3;Q12873-2;B4DLC6;A0A5F9ZHX5 CHD4;CHD5;DKFZp434P202;DKFZp434K213;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3 no no 0 0 0 1.67 0.471 1 2 24.283 24.33 3;4 5.0839E-07 3797 20230619_1881_Aki_TMTPro18x_K_F2 151.13 130.46 96730 44356 77879 84689 111970 97207 90063 106260 133800 78407 106470 95531 108780 96639 72929 105590 85905 97621 89054 41021 81188 82322 112950 97542 93438 107130 132550 81366 110480 96372 109280 100080 75695 105440 82149 92763 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 186780000 11871 1005;1857 11233 22714;22715;22716 18223;18224;18225 18224 3 9606 Homo sapiens -0.052375354752030034 HHYESLQTAK Unmodified 1212.5887 0.58873523 621 B7Z6Y2;A0A024RAF1;A0A024RAJ2;A0A024RAI5;A0A024RAI6;A0A024RAI4;A0A024RAF0;A0A024RAE9;A0A024RAG8;A0A024RAF6;A0A024RAJ3;A0A024RAG9;O00499-2;O00499-5;O00499-3;O00499-6;O00499-11;O00499-4;O00499-8;O00499-7;O00499-10;O00499-9;O00499;Q9BTH3;B7Z2Z2;Q8WWH9 BIN1 Myc box-dependent-interacting protein 1 yes no 0 0 0 6 0 1 31.684 31.717 4 0.00021748 6414 20230619_1886_Aki_TMTPro18x_K_F6 105.4 69.885 42727 17724 31286 38782 47717 32423 45044 58669 55173 55713 65045 65039 78260 54355 34797 77498 50722 66648 39299 16447 33002 37338 48073 33881 45909 57993 56044 56701 66778 65297 77299 57675 37273 76767 48487 63359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13628000 11872 621 11234 22717 18226 18226 1 9606 Homo sapiens -0.00905559130455913 HIADLAGNSEVILPVPAFNVINGGSHAGNK Unmodified 3010.5625 0.56246748 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2;K7EM90;A0A2R8YEM5;A4UCS8 ENO1 Alpha-enolase;Enolase yes no 0 0 0 2 0 1 61.36 61.371 4 8.841E-10 19171 20230619_1881_Aki_TMTPro18x_K_F2 103.86 93.247 25627 58323 19175 40302 43661 41937 31273 62915 51648 55885 24818 28168 58903 52001 42486 42029 52674 77694 23911 53145 20502 42267 43091 42845 32911 62501 50543 55998 28234 30625 58291 52426 44052 44381 50473 73324 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2027699999.9999998 11873 293 11235 22718 18227 18227 1 9606 Homo sapiens 0.1376087469579943 HIAEDADR Unmodified 925.42536 0.42535829 3083;2862 P09493-3;D9YZV5;P09493-4;Q15657;P09493-10;A0A0K0K1I0;P09493-8;Q8TCG4;P09493-9;H0YKX5;P09493;D9YZV4;Q6ZN40;A0A0S2Z4G6;P09493-6;H0YL42;H7BYY1;B7Z596;F5H7S3;Q1ZYL5;P09493-2;B7Z722;D9YZV7;P09493-5;A0A494BZZ2;H0YKJ4;H0YK48;Q59GR8;A0A024R5W6;P09493-7;A0A994J554;A0A494C0V8 TPM1 Tropomyosin alpha-1 chain no no 0 0 0 1 0 1 26.679 26.679 3 0.00020853 4724 20230619_1880_Aki_TMTPro18x_K_F1 139.97 77.255 10058 5982.5 14120 13880 44995 42780 29520 43659 32227 13140 20007 25277 18377 19421 28586 8955.7 21041 19188 9315.5 5545 14468 13733 43811 41064 30745 43642 32141 15297 21093 24898 19315 19660 28360 9811.1 20192 18123 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64293000 11874 2862;3083 11236 22719 18228 18228 1 9606 Homo sapiens -0.0403373718148714 HIAEEADR Unmodified 939.44101 0.44100836 1095;1096;3746 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;A0A494C0P6;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;P06753-7;Q8NAH0;Q5VU62;P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72 TPM3;DKFZp686J1372;TPM3-ROS1;HEL-S-82p;TPM4;HEL-S-108 Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor;Tropomyosin alpha-4 chain no no 0 0 0 1 0 1 27.309 27.309 3 3.7315E-07 4958 20230619_1880_Aki_TMTPro18x_K_F1 194.44 144.32 275680 140100 381380 384160 609920 576870 480080 591030 450580 311310 515800 541370 405370 366530 490530 151140 504770 410970 255120 130410 382000 369990 610720 568620 490990 594900 462640 336480 521700 532790 421320 372580 496120 171100 482170 387930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1286500000 11875 1095;1096;3746 11237 22720 18229 18229 1 9606 Homo sapiens -0.031134506644320936 HIAEEADRK Unmodified 1067.536 0.53597137 1095;1096;3746 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;A0A494C0P6;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;P06753-7;Q8NAH0;Q5VU62;P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72 TPM3;DKFZp686J1372;TPM3-ROS1;HEL-S-82p;TPM4;HEL-S-108 Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor;Tropomyosin alpha-4 chain no no 0 0 1 3 0.816 1 1 1 30.585 30.658 4 0.002622 5987 20230619_1881_Aki_TMTPro18x_K_F2 78.939 51.635 105060 77797 132520 135540 183370 216700 166900 188720 191480 124540 204290 249870 192490 193890 183230 81581 269370 264560 97296 71700 133150 133080 186060 212150 170040 192950 193860 133210 208800 245750 196660 195970 190630 94374 256860 249360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342460000 11876 1095;1096;3746 11238 22721;22722;22723 18230;18231 18230 2 9606 Homo sapiens 0.004904828067537892 HIAEEADRKYEEVAR Unmodified 1814.8911 0.89112484 1095;1096;3746 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;A0A494C0P6;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;P06753-7;Q8NAH0;Q5VU62;P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72 TPM3;DKFZp686J1372;TPM3-ROS1;HEL-S-82p;TPM4;HEL-S-108 Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor;Tropomyosin alpha-4 chain no no 0 0 2 4 0.816 1 1 1 42.304 42.368 5 3.5975E-08 10556 20230619_1883_Aki_TMTPro18x_K_F4 142.95 109.65 102050 120210 112660 98437 150590 112210 112620 125400 113710 117410 110110 92270 103640 74697 129370 121950 108630 91743 94706 109790 113960 101570 151930 112990 115870 126900 115760 118260 112810 94322 107090 80169 129910 120130 104020 87520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145220000 11877 1095;1096;3746 11239 22724;22725;22726 18232 18232 1 9606 Homo sapiens 0.016274920274781834 HIAEVSQEVTR Unmodified 1267.6521 0.65206377 1274 P61764-2;P61764;A0A1B0GVQ5;A0A1B0GWF2;A0A1B0GTP9;A0A0D9SG72;A0A2R8Y5D4;B7Z2V7;B7Z1V5;B7Z3F4;Q59GC9;A0A994J7L2;A0A1B0GW76 STXBP1 Syntaxin-binding protein 1 yes no 0 0 0 3.5 0.5 1 1 36.004 36.06 3 1.6679E-23 7985 20230619_1882_Aki_TMTPro18x_K_F3 253.71 217.03 34255 23866 34913 31711 34076 26070 30908 29394 32285 31452 45362 36225 42239 34413 39115 35864 44038 39896 31650 21928 35357 31320 35280 26900 31420 29875 33314 31822 45725 36541 43043 35646 40080 36257 42059 37866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133230000 11878 1274 11240 22727;22728 18233;18234 18233 2 9606 Homo sapiens 0.028943815867933154 HIAFTPESQR Unmodified 1184.5938 0.5938206 336 Q5H9R7-5;Q5H9R7;Q5H9R7-2;Q5H9R7-6;Q5H9R7-4;E9PKF6;H7BXH2;A0A024R5F3;Q5H9R7-3;E9PQP7;B4DYU6;B4DTT7;B4E0C2;H0YEN2;Q7L294 PPP6R3;SAPS3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 0 0 0 6.5 0.5 1 1 36.745 36.813 3 3.7778E-06 8251 20230619_1886_Aki_TMTPro18x_K_F6 163.91 135.9 64420 52192 62018 60014 78025 87052 72165 78668 100110 62797 68493 74246 70184 56606 72631 60777 80975 69954 59545 47854 63430 60336 79685 85778 73953 80481 99031 64731 71884 74233 71697 59213 74200 61567 77320 66386 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168820000 11879 336 11241 22729;22730 18235;18236 18235 2 9606 Homo sapiens 0.008907447321689688 HIANYISGIQTIGHR Unmodified 1678.8903 0.89033698 3931 Q15393;A8K6V3;B3KQH1;B3KM77;Q15393-3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 5 0 1 46.391 46.468 3 1.7877E-08 12252 20230619_1885_Aki_TMTPro18x_K_F5 142.95 107.36 45775 39092 45493 41195 45554 53542 51494 51546 72689 39992 41684 36714 44895 31736 40458 42294 43972 43291 42337 35808 46219 41624 47535 53160 52208 52474 71507 41005 44328 37290 45481 33497 41422 42380 42034 41110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67876000 11880 3931 11242 22731 18237 18237 1 9606 Homo sapiens 0.07804742169059864 HIDCAAIYGNEPEIGEALK Unmodified 2098.9994 0.99935466 3450 V9HWI0;P14550;Q5T621;V9GYG2;V9GYP9 HEL-S-165mP;AKR1A1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 4 0.707 1 2 1 54.931 54.965 3;4 2.0295E-07 16365 20230619_1882_Aki_TMTPro18x_K_F3 110.82 96.208 124580 98079 118420 128670 122720 139480 135500 133930 153710 150050 144920 160040 161610 145600 132410 172940 164900 187610 115120 90055 120940 127560 127530 140070 136450 137650 155260 151100 149910 161500 163120 152100 137180 174040 157620 177950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 282250000 11881 3450 11243 22732;22733;22734;22735 18238;18239 18238 2 9606 Homo sapiens -0.0061850450424572045 HIDCAHVYQNENEVGVAIQEK Unmodified 2452.1441 0.14412141 435 A0A024R7A8;P15121;Q59EL5;E9PCX2;E9PEF9 AKR1B1 Aldose reductase yes no 0 0 0 4 0.816 1 1 1 46.345 46.411 4 1.2343E-22 12222 20230619_1885_Aki_TMTPro18x_K_F5 182.34 172 143140 82853 119650 135000 111230 121860 129440 107680 140910 207900 165410 169430 177480 156140 141620 183500 162140 175600 131940 76378 123450 131780 116740 123870 129810 113740 144250 203490 169080 173140 179080 162960 146010 183410 155030 166820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1836099999.9999998 11882 435 11244 22736;22737;22738 18240;18241;18242 18242 3 9606 Homo sapiens -0.023864880950895895 HIDLVEGDEGR Unmodified 1238.5891 0.58912916 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;A0A994J428;B3KRA9;A0A994J4Q4;A0A994J6R6;A0A994J4P6 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 1 0 2 39.511 39.511 2;3 1.9095E-12 9846 20230619_1880_Aki_TMTPro18x_K_F1 202.03 171.42 78475 61500 89720 91441 112870 125400 127830 114550 150590 107520 119380 115090 130870 119140 119050 124620 147420 118540 72631 56550 90597 90293 115790 123930 128630 117590 150740 109390 124430 116690 132740 123000 122840 124810 140570 112760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 553190000 11883 43 11245 22739;22740 18243;18244 18244 2 9606 Homo sapiens -0.020621842012587877 HIDMVEGDEGR Oxidation (M) 1272.5405 0.54046441 2017 Q68E10;E9PB90;A8K2U2;P52789;Q53SG7;Q09LL6 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 yes no 0 1 0 1 0 1 31.401 31.401 3 0.0013954 6551 20230619_1880_Aki_TMTPro18x_K_F1 82.912 65.886 22970 11948 27846 25028 26913 29019 24857 26859 27339 25678 44373 45827 34635 35187 39924 27802 49627 41301 21229 11063 27846 24237 27957 28969 25294 27564 28347 26623 44316 45235 35949 36233 40967 28859 47331 39115 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36288000 11884 2017 11246 22741 18245 18245 1264 1 9606 Homo sapiens -0.08490420832663403 HIDPVVLK Unmodified 919.5491 0.54910224 3026 R4GMW6;H0Y6Z9;R4GMX3;Q9UBI1;B3KY73;R4GN54;H0Y4W0 COMMD3-BMI1;COMMD3 COMM domain-containing protein 3 yes no 0 0 0 7 0 1 45.299 45.385 3 0.0070861 11489 20230619_1887_Aki_TMTPro18x_K_F7 84.476 41.449 80316 59216 73812 68866 71707 79558 75148 79598 88685 86471 83532 81000 97266 73099 75262 108660 98880 85173 74170 54321 75454 68932 74780 79649 76023 81468 89413 86857 86509 82276 97752 77557 78402 107210 94284 81197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154420000 11885 3026 11247 22742 18246 18246 1 9606 Homo sapiens 0.08610965656794178 HIEEVRK Unmodified 909.50321 0.50321468 2660 B5BU83;P16949;Q96CE4 STMN1 Stathmin yes no 0 0 1 5 0.816 1 1 1 31.668 31.726 3 0.0016914 6281 20230619_1885_Aki_TMTPro18x_K_F5 135.84 54.059 289060 123460 341060 349170 501450 448480 361100 418820 355830 273120 506690 522630 344030 372050 445720 122270 517430 447410 266880 115130 344410 334920 503360 445050 372440 425960 368210 291370 505920 513630 361600 375490 453540 146220 493900 421760 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 919420000 11886 2660 11248 22743;22744;22745 18247;18248;18249 18248 3 9606 Homo sapiens 0.044843204745689036 HIEIFTDLSSR Unmodified 1316.6725 0.67246486 3444 P13010;Q53TC2;C9JZ81 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 7 0.816 1 1 1 50.807 50.885 3 8.0354E-13 14258 20230619_1886_Aki_TMTPro18x_K_F6 211.64 190.78 100510 83523 96054 88744 95061 102080 107510 100420 125290 89629 95166 77107 96201 82011 99429 95105 87872 90227 92915 76519 97886 89438 99156 102220 108210 102420 125310 90869 99006 79113 98301 85138 100390 95112 84203 85741 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 701790000 11887 3444 11249 22746;22747;22748 18250;18251;18252 18250 3 9606 Homo sapiens 0.02679552246604544 HIESMIR Oxidation (M) 900.44874 0.44873627 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5;Q9BWF4 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 1 0 4.5 0.5 1 1 29.908 29.979 3 0.026937 5534 20230619_1883_Aki_TMTPro18x_K_F4 67.032 29.474 63033 36574 76579 76843 109380 90592 75710 103640 78860 61248 92288 111660 81575 83847 95679 57729 110870 100930 58283 33844 77106 74427 109830 90851 78500 103770 80638 65665 93757 110040 84373 85983 97660 60989 105860 95441 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38553000 11888 2702 11250 22749;22750 18253 18253 1623 1 9606 Homo sapiens -0.0054701466849564895 HIFALFNTEQR Unmodified 1374.7044 0.70443369 1021;2880 A0A0U1RQP1;A0A0D9SFE4;A0A994J7J4;Q05193-3;Q05193;B4DHH5;A0A0D9SFB1;B7ZAC0;B4DK06;Q05193-5;Q05193-2;Q59GI5;A0A994J5P0;B3KU80;E5RHK8;H0YBC6;Q9UQ16-2;Q9UQ16-3;Q9UQ16;Q9UQ16-4;A0A8I5KXV5 DNM1;DNM3 Dynamin-1;Dynamin-3 no no 0 0 0 3 0 1 52.844 52.903 3 5.7621E-09 15459 20230619_1882_Aki_TMTPro18x_K_F3 145.46 112.93 45887 44517 47026 51301 55573 56018 60209 54079 61840 59219 50120 51395 56457 47274 61391 61530 63773 60902 42488 40792 47832 51321 57113 56269 60463 55532 62475 59343 52291 52389 57661 49669 62470 61567 60975 57862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82254000 11889 1021;2880 11251 22751 18254 18254 1 9606 Homo sapiens 0.03206964720402539 HIGLVYSGMGPDYR Unmodified 1563.7504 0.7503976 609 Q53GF5;A0A024RA52;P25787;A0A7I2V2H3 PSMA2 Proteasome subunit alpha type;Proteasome subunit alpha type-2 yes no 0 0 0 1 0 1 48.298 48.298 3 1.2996E-08 13685 20230619_1880_Aki_TMTPro18x_K_F1 149.82 134.68 19481 14009 20652 21510 19926 24205 22771 19704 41093 20909 21701 18732 25063 16619 21116 25385 24298 26014 18009 12891 20880 21129 20882 24154 23334 20484 39984 21056 23294 19067 25266 17704 21741 25386 23229 24695 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67921000 11890 609 11252 22752 18255 18255 1 9606 Homo sapiens -0.008927581596481104 HIGLVYSGMGPDYR Oxidation (M) 1579.7453 0.74531222 609 Q53GF5;A0A024RA52;P25787;A0A7I2V2H3 PSMA2 Proteasome subunit alpha type;Proteasome subunit alpha type-2 yes no 0 1 0 8 0 1 44.388 44.406 3 3.7237E-09 11260 20230619_1888_Aki_TMTPro18x_K_F8 162.48 149.71 31384 24860 31084 38053 31929 35399 32510 35579 75943 33201 30008 23815 32015 34297 32935 29793 36555 28303 29012 22866 31653 37286 33209 35986 34049 36270 72938 33516 32983 24978 32732 34772 33652 29949 34884 26928 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76387000 11891 609 11252 22753 18256 18256 348 1 9606 Homo sapiens -0.021370620222569414 HIGYDDSSK Unmodified 1020.4512 0.45123869 1192 A0A140VJP5;P31153;B4DEX8;P31153-2 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase yes no 0 0 0 3.5 0.5 1 1 36.118 36.168 3 8.1013E-06 7966 20230619_1883_Aki_TMTPro18x_K_F4 157.34 131.77 128870 64485 144430 143580 200020 195720 154860 169790 161990 147080 206460 192330 197250 164440 172790 96472 213910 159520 118990 59782 146210 139030 201900 193260 159090 174590 166330 151250 209210 192160 200400 167040 177930 101870 203890 151040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 359150000 11892 1192 11253 22754;22755 18257 18257 1 9606 Homo sapiens -0.058168877298498955 HIHITQATETTTTR Unmodified 1608.822 0.82198264 1109 A0A0S2Z4Y4;A0A0S2Z5H3;Q14677;Q14677-3;Q14677-2 CLINT1 Clathrin interactor 1 yes no 0 0 0 6 0 1 30.825 30.856 3 4.5157E-05 6098 20230619_1886_Aki_TMTPro18x_K_F6 98.592 76.394 4123.2 0 1308.5 3134.9 2960.4 1647.8 2564.7 3008.6 2562.7 3236.3 2756.9 2981.8 3676.2 2101.2 3814.2 3528.4 3507.2 4296.4 3767.3 0 1596.8 2880.2 2928 1807.7 2608.2 2986 2624.7 3246.5 2862.9 3008.5 3721.9 2278.7 3857.7 3565.5 3364.1 4069.7 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3149600 11893 1109 11254 22756 18258 18258 1 9606 Homo sapiens 0.04192452798542945 HIIEDPCTLR Unmodified 1252.6234 0.62340617 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 4 0 1 40.37 40.412 3 1.1591E-05 9692 20230619_1883_Aki_TMTPro18x_K_F4 126.39 97.59 87698 71899 87538 87031 108550 131770 118810 113500 142760 116650 131130 132290 142050 120240 108520 128420 159040 154140 81091 65953 89287 87235 111480 129390 119890 117260 143530 118270 135530 133190 143090 124900 113830 130300 151640 146150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117740000 11894 594 11255 22757 18259 18259 1 9606 Homo sapiens 0.007199406860081581 HIIEDTEEAR Unmodified 1211.5782 0.57823012 1636 A0A7P0TAV2;A0A6Q8PGK3;A0A7P0T9G7;B7ZLW8;Q99707;B4DST3;A0A7P0TAJ0;Q6MZH4;B1ANE3 MTR;DKFZp686A22123 Methionine synthase yes no 0 0 0 1 0 1 34.654 34.654 3 3.0417E-06 7847 20230619_1880_Aki_TMTPro18x_K_F1 134.59 124.9 27617 15632 27254 28759 30236 31312 30926 33932 43056 37998 42426 48187 44345 44175 38703 47422 50173 48331 25485 14437 27768 27982 31194 31512 31523 34585 43137 38505 43673 48310 44987 45834 40135 47634 47882 45902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59471000 11895 1636 11256 22758 18260 18260 1 9606 Homo sapiens -0.019095865755161867 HIIEGLK Unmodified 808.48069 0.48068833 1565 A0A590UJB6;A0A590UJJ4;Q13303-3;A0A5F9UN28;Q13303-5;Q13303;Q13303-4;Q13303-2;A8K1X9;A1PR14;B2R615;B2R776;Q6FG22;B0AZM0;Q6FG44;Q5TG81;A0A590UJY1;B7Z435;C9JQ60;Q5TG84;Q14722-2;Q14722-3;Q14722 KCNAB2;KCNAB1 Voltage-gated potassium channel subunit beta-2;Voltage-gated potassium channel subunit beta-1 yes no 0 0 0 8 0 1 43.439 43.449 3 0.003853 10861 20230619_1888_Aki_TMTPro18x_K_F8 113.7 46.664 51833 32440 47206 48348 44128 51755 50690 47277 66845 59853 69027 75366 86558 63706 60941 89831 91555 89264 47822 29859 48301 47548 46318 51952 51230 48968 67252 60311 71496 75444 86533 67514 64265 89723 87287 84798 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58114000 11896 1565 11257 22759 18261 18261 1 9606 Homo sapiens 0.06878721076952843 HIILVLSGK Unmodified 978.6226 0.62260154 2319 H3BRK5;H3BMW1;H3BNF0;B2RDN3;Q9Y5Y2;Q2YS46;H3BNS4 NUBP2;NUBP1 Cytosolic Fe-S cluster assembly factor NUBP2 yes no 0 0 0 5 0 1 51.879 51.953 3 0.0024524 14589 20230619_1885_Aki_TMTPro18x_K_F5 88.177 88.177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11897 2319 11258 22760 18262 18262 1 9606 Homo sapiens 0.13243514099281128 HIITTTR Unmodified 840.48175 0.48175096 3362 V9HWF9;O95861-4;O95861;A6NF51;O95861-2;F8W1J0;O95861-3;B7Z9J7 HEL20;BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes no 0 0 0 1 0 1 29.283 29.283 2 0.072343 5694 20230619_1880_Aki_TMTPro18x_K_F1 76.134 55.614 15687 11233 13838 18842 25830 21271 21134 22716 25773 16700 22932 22173 20435 17448 23829 16030 23975 25499 14479 10349 14415 18418 25707 21363 21716 22943 25847 17377 23555 22104 21098 18091 24135 16685 22949 24113 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7038400 11898 3362 11259 22761 18263 18263 1 9606 Homo sapiens 0.05512935445858602 HIIYVDNK Unmodified 1000.5342 0.53418046 2485 B4DH39;Q8TAF6;O60488-2;O60488;A0A804HI36 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes no 0 0 0 7 0 1 41.634 41.705 3 0.00048206 9961 20230619_1887_Aki_TMTPro18x_K_F7 122.74 102.22 65993 44946 68418 66524 48610 56098 50324 57283 68080 75554 81646 71391 82892 62090 57948 94573 91085 65312 60977 41351 68973 65267 52154 57528 51277 58930 68922 75236 83067 72427 83346 66065 61388 92772 86650 62438 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120450000 11899 2485 11260 22762 18264 18264 1 9606 Homo sapiens 0.03393473788810297 HILANFK Unmodified 841.48102 0.48102268 986 A0A0P1J1R0;Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;A0A024RDY2;E9PJF7;P13693-2;B4DKJ4;H0YCX0;Q56UQ5 TPT1 Translationally-controlled tumor protein;TPT1-like protein no no 0 0 0 3.5 0.5 1 1 45.174 45.234 3 0.00024677 11812 20230619_1883_Aki_TMTPro18x_K_F4 176.98 90.868 329530 228980 237270 278930 294380 505460 329030 350600 556630 213660 179970 121650 155820 111500 248090 137860 129800 45713 303720 210190 250070 280340 304340 489780 336370 364930 538020 221350 201030 127530 164100 116770 243480 133380 124760 44703 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 511100000 11900 986 11261 22763;22764 18265 18265 1 9606 Homo sapiens 0.05394140796806823 HILFLGK Unmodified 826.50651 0.50650915 2804 CON__Q9N2I2 yes yes 0 0 0 4.5 0.5 1 1 51.254 51.305 3 0.012556 14583 20230619_1883_Aki_TMTPro18x_K_F4 88.734 60.336 + 29952 22007 26141 26848 42925 37747 34748 35074 64322 60004 101740 131790 61202 80730 90826 85392 125230 155710 27649 20197 27117 26860 43034 37312 36430 36704 65223 61474 101070 128690 65390 85123 93717 89664 119700 147030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202700000 11901 2804 11262 22765;22766 18266 18266 1 0.08631615319222874 HILGDPNLTK Unmodified 1106.6084 0.60840804 2576 J3KTK0;J3KSW6;B4DR88;Q8IX18-4;Q8IX18-3;Q8IX18-2;Q8IX18 DHX40 Probable ATP-dependent RNA helicase DHX40 yes no 0 0 0 8 0 1 44.5 44.519 3 0.0061704 11323 20230619_1888_Aki_TMTPro18x_K_F8 71.03 47.179 62090 50365 47432 58625 61516 62751 62767 66847 86884 47465 40727 41781 47817 36343 45956 51413 48350 50087 57298 46184 49677 58585 62856 63251 63916 67477 85209 48906 44280 42515 48488 38491 46926 51329 46249 47581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39238000 11902 2576 11263 22767 18267 18267 1 9606 Homo sapiens 0.059368168803075605 HILILQNK Unmodified 977.6022 0.60220045 3571 P41091;Q2VIR3;Q2VIR3-2 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 3.5 0.5 1 1 45.917 45.977 3 1.6195E-05 12130 20230619_1883_Aki_TMTPro18x_K_F4 186.43 127.45 367880 300040 367310 377780 370360 421680 403590 377630 446400 438710 421660 394680 475010 347090 403320 491930 445630 410350 340160 275340 373300 375690 385450 422040 406340 390530 451530 438820 435910 401270 479340 367440 414190 487200 425720 390750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1046399999.9999999 11903 3571 11264 22768;22769 18268;18269 18269 2 9606 Homo sapiens 0.11250343439473909 HILQQQETR Unmodified 1151.6047 0.60471964 521 A0A024R8K8;A0A2P0H7U5;P42694 HELZ Probable helicase with zinc finger domain yes no 0 0 0 5 0 1 30.343 30.419 3 8.9645E-05 5808 20230619_1885_Aki_TMTPro18x_K_F5 140.11 101.09 11828 8203.8 12633 11294 15425 17382 14509 12582 21848 14489 15657 14438 13669 12404 16709 12290 16218 12504 10932 7540.6 12800 11228 15791 17000 14898 13237 21571 14563 16264 14587 14166 12853 16884 12381 15496 11888 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17767000 11904 521 11265 22770 18270 18270 1 9606 Homo sapiens 0.03498147106461147 HILYNEQR Unmodified 1071.5461 0.54614213 1823 A0A8V8TP16;P51692;A0A8V8TM91;A0A8V8TMR0;A0A8V8TP21;A0A8V8TP00;A0A8V8TM84;Q59H39;A0A8V8TMP4;P42229;A0A384N5W4;A8K6I5;A0A7I2YQY3;Q8WWS9;K7EK35;A0A7I2V380;Q59GY7;Q8WW55;A0A7I2YQF1;C9J4I3 STAT5B;STAT5A Signal transducer and activator of transcription 5B;Signal transducer and activator of transcription;Signal transducer and activator of transcription 5A yes no 0 0 0 5.5 0.5 1 1 32.693 32.753 3 0.00064146 6779 20230619_1886_Aki_TMTPro18x_K_F6 116.73 36.819 47960 39248 44493 48023 54220 51628 54271 51392 60182 51788 60815 52422 58569 54279 53534 51816 65427 57483 44321 36006 45645 47829 55494 51953 54893 52539 60970 52363 62210 53282 59647 55791 55167 52443 62430 54567 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65703000 11905 1823 11266 22771;22772 18271;18272 18272 2 9606 Homo sapiens 0.01323090531991511 HIMGQNVADYMR Oxidation (M) 1449.6493 0.64930335 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9 RPL5 60S ribosomal protein L5 yes no 0 1 0 6.17 2.41 1 1 2 2 39.755 39.795 3 8.9136E-14 9851 20230619_1888_Aki_TMTPro18x_K_F8 181.66 165.91 173290 123060 154610 179920 181410 198910 195720 195210 228010 170820 183520 164390 177170 146290 179570 174720 198240 165830 159960 113180 159180 177190 186760 199540 197450 199030 228500 173850 190010 166670 181150 153020 183540 174660 189270 157720 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 884260000 11906 1916 11267 22773;22774;22775;22776;22777;22778 18273;18274;18275;18276;18277 18277 1228;1229 5 9606 Homo sapiens -0.057535331340432094 HIMGQNVADYMR Unmodified 1433.6544 0.65438873 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9 RPL5 60S ribosomal protein L5 yes no 0 0 0 1 0 1 45.751 45.751 3 3.4526E-24 12566 20230619_1880_Aki_TMTPro18x_K_F1 221.6 199.72 51902 48703 49784 50386 50537 62459 55334 56850 66339 47433 44623 47867 50820 35860 49964 52001 55079 50304 48020 44590 50772 50931 52634 62114 55850 58204 66053 48485 47109 48174 51598 38273 51112 51894 52617 47814 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 572030000 11907 1916 11267 22779 18278 18278 1 9606 Homo sapiens -0.04509229271411641 HIMGQNVADYMR 2 Oxidation (M) 1465.6442 0.64421797 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9 RPL5 60S ribosomal protein L5 yes no 0 2 0 6.6 1.02 1 1 2 1 34.624 34.679 3 0.0016242 7414 20230619_1886_Aki_TMTPro18x_K_F6 75.088 58.738 113160 99859 110050 126280 148120 140960 138990 138450 176380 136030 159680 154150 154050 129770 152690 162720 165850 125500 104660 91616 112700 125530 150480 141430 141790 141560 176760 138240 164340 154930 157350 136330 156050 160910 158280 119740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 558730000 11908 1916 11267 22780;22781;22782;22783;22784 18279;18280;18281 18279 1228;1229 3 9606 Homo sapiens -0.0699783699665204 HINDSAPEVR Unmodified 1136.5574 0.5574351 3873 Q14008-2;Q14008;Q14008-3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 2.5 0.5 1 1 31.46 31.533 3 2.4967E-10 6307 20230619_1881_Aki_TMTPro18x_K_F2 186.87 172.91 73666 59053 68401 73581 83084 88669 72733 75896 106710 87803 93435 91430 94994 75874 87580 99184 115200 94901 68068 54190 70161 73301 84917 88236 74989 78724 106220 88264 96529 92150 96557 80027 90765 99024 109810 90258 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 188760000 11909 3873 11268 22785;22786 18282;18283 18282 2 9606 Homo sapiens -0.005381321645245407 HINELSMK Oxidation (M) 986.48552 0.48551571 2120 A8K8E1;Q8TC07-2;Q8TC07-3;Q8TC07;Q9NSR4 TBC1D15;DKFZp761D0223 TBC1 domain family member 15 yes no 0 1 0 6.5 0.5 1 1 36.993 37.059 3 0.043303 8385 20230619_1886_Aki_TMTPro18x_K_F6 49.85 33.969 30022 23222 33935 33669 39467 37602 35505 36332 43794 39151 43750 39763 44438 40357 37111 40294 49553 42591 27781 21348 34219 33189 40404 37702 36295 37277 44137 39452 44883 40373 45012 41600 38565 40619 47244 40454 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27502000 11910 2120 11269 22787;22788 18284 18284 1333 1 9606 Homo sapiens -0.008267628425869589 HINMDGTINVDDFK Oxidation (M) 1633.7406 0.74062078 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9;O75643-2;Q5ZF01 SNRNP200;ASCC3L1 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 1 0 5 0.816 1 1 1 50.472 50.533 3 0.0006799 14140 20230619_1886_Aki_TMTPro18x_K_F6 82.908 65.626 30289 30123 26196 32087 37474 37369 36802 33790 46982 39444 42339 49557 43441 42711 37142 46388 49078 49982 28014 27581 27155 32315 38007 37329 37436 34931 47085 39891 43748 49594 44057 44448 38589 46734 46848 47432 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117920000 11911 3312 11270 22789;22790;22791 18285 18285 1944 1 9606 Homo sapiens -0.05089990955707435 HIPGAAFFDIDQCSDR Unmodified 1847.8261 0.82608174 1209 A0A140VJX3;P25325;P25325-2;Q2VEU1;B1AH49;Q59HD5;Q2VEU0 MPST 3-mercaptopyruvate sulfurtransferase;Sulfurtransferase yes no 0 0 0 5 0.816 1 1 1 55.622 55.672 3 3.5223999999999996E-19 16089 20230619_1885_Aki_TMTPro18x_K_F5 197.01 191.22 249500 174410 237180 253040 257350 268780 253360 263560 311770 297750 310640 288080 310740 286830 289450 338010 307290 348830 230400 160400 242330 249210 265610 270450 257570 270500 314290 298870 318610 293010 316280 298560 295990 339310 294130 331050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 530970000 11912 1209 11271 22792;22793;22794 18286;18287;18288 18287 3 9606 Homo sapiens -0.0639182577003794 HIQALAIR Unmodified 920.55558 0.55558461 1507 P14735;A0A7I2V610;A0A3B3ISG5;A0A7I2V2P6;A0A7I2V3E3;A0A7I2YQV5;Q59GA5;P14735-2;B3KSB8;B7Z7W6;A0A7I2V3K9 IDE Insulin-degrading enzyme yes no 0 0 0 3 0 1 38.633 38.687 3 0.00056905 9045 20230619_1882_Aki_TMTPro18x_K_F3 116.9 66.297 50132 39189 54812 50097 58067 67893 61955 55145 87769 36666 38251 38067 36023 30327 39517 40143 45912 43790 46378 35974 55319 49930 60223 66989 62986 56740 85805 38207 41483 38345 37037 32066 40477 40382 43852 41561 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28764000 11913 1507 11272 22795 18289 18289 1 9606 Homo sapiens 0.09212903608170109 HIQDLNWQR Unmodified 1208.6051 0.60505399 2250 Q53HE3;B2R7W3;O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes no 0 0 0 7.5 0.5 1 1 41.769 41.803 3 0.00010019 9990 20230619_1887_Aki_TMTPro18x_K_F7 124.95 76.67 78270 72965 82173 89784 86503 99533 101150 98691 122400 96551 107300 101940 105420 94646 98244 99299 125180 113920 72467 66911 83279 89420 89942 99877 101770 100830 122780 97915 110680 103020 107380 98120 101510 100540 119430 108090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113460000 11914 2250 11273 22796;22797 18290 18290 1 9606 Homo sapiens 0.009095668262943946 HIQEHYGGTATFYLSQAADGAK Unmodified 2364.1135 0.11347321 3624 V9HWE7;P51570;K7EII7 HEL-S-19;GALK1 Galactokinase yes no 0 0 0 8 0 1 48.731 48.797 4 1.8079E-17 12989 20230619_1888_Aki_TMTPro18x_K_F8 166.06 156.41 31026 24637 27505 35991 35698 40105 35730 35262 35785 34108 36361 40673 35941 37599 38233 40158 42546 45552 28656 22649 28410 35438 36439 40116 36022 36338 36480 34739 37304 40883 36858 38993 39087 40613 40687 43197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88379000 11915 3624 11274 22798 18291 18291 1 9606 Homo sapiens -0.014018984177710081 HIQQVDCSGNDLEQLHIK Unmodified 2133.0273 0.027300743 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPW9;H7C3P6;A0A8V8TQG1;H0YCT1 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 5 0 1 47.164 47.24 4 0.0084988 12611 20230619_1885_Aki_TMTPro18x_K_F5 66.022 46.444 56433 54652 62153 56635 60831 75221 61336 72610 94186 77064 75098 79239 91794 78600 72080 85297 87963 85429 52286 50032 62614 57322 63417 74593 62858 74418 93312 77762 78679 80316 92244 81454 74588 85586 83991 81149 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219460000 11916 1852 11275 22799 18292 18292 1 9606 Homo sapiens 0.006108184758431889 HIVENAVQK Unmodified 1036.5665 0.56654322 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6 IPO5;RANBP5 Importin-5 yes no 0 0 0 6.5 0.5 1 1 37.83 37.9 3 2.8585E-09 8667 20230619_1886_Aki_TMTPro18x_K_F6 189.38 167.93 251580 175980 219680 209450 239300 242920 222950 221360 296160 258870 287420 263780 292920 253630 242570 272910 319950 279360 232170 161510 225990 209280 246630 242710 228050 228630 297130 259910 295300 267300 296500 262980 251960 274240 305100 265420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 836610000 11917 782 11276 22800;22801 18293;18294 18293 2 9606 Homo sapiens 0.04972261191801408 HIVEWNVQTCK Unmodified 1412.6871 0.68706906 3916 Q15061;C9JEE7 WDR43 WD repeat-containing protein 43 yes no 0 0 0 4.5 3.5 1 1 46.649 46.673 3 8.637E-05 13016 20230619_1880_Aki_TMTPro18x_K_F1 101.39 85.14 137390 127060 130270 147090 126240 147730 147900 137310 172280 172830 137410 146110 187760 143840 136140 197330 175680 173550 127090 116460 132980 146910 132130 149120 148590 141980 172900 171990 144850 149470 187530 151350 141860 195910 167700 165100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 523450000 11918 3916 11277 22802;22803 18295;18296 18295 2 9606 Homo sapiens -0.002766988768826195 HIVNHAVVNEDPNAR Unmodified 1683.8441 0.84411507 1891 A0JLQ2;E7ERX9;D3DSU3;Q9NQT8 KIF13B Kinesin-like protein;Kinesin-like protein KIF13B yes no 0 0 0 4 0 1 31.177 31.241 3 0.0025503 6032 20230619_1883_Aki_TMTPro18x_K_F4 82.908 73.8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11919 1891 11278 22804 18297 18297 1 9606 Homo sapiens 0.02954677267007355 HIVVYHR Unmodified 922.51372 0.51371979 337 A0A024R5F4;P50416;B2RAQ8;P50416-2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 0 1.5 0.5 1 1 28.967 29.003 3 0.0053155 5644 20230619_1880_Aki_TMTPro18x_K_F1 106.76 84.99 10708 7487.2 10378 10536 17850 16858 14105 15576 22095 10454 11979 14301 12999 10944 11522 10792 15322 16882 9889.8 6883.4 10680 10470 17843 16538 14675 15854 21620 10980 12824 14223 13173 11400 11947 11190 14634 15964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30137000 11920 337 11279 22805;22806 18298 18298 1 9606 Homo sapiens 0.04936347919658601 HIYFINCGDSR Unmodified 1380.6245 0.62446881 3314 O75688-2;B8ZZF0;C9JIR6;A0A3B3IS24;A8K599;Q4J6C0;B3KP90;O75688-4;O75688;O75688-5 PPM1B Protein phosphatase 1B yes no 0 0 0 7.5 0.5 1 1 43.9 43.951 3 0.0078129 11095 20230619_1888_Aki_TMTPro18x_K_F8 55.776 45.405 51123 37973 55558 57781 64289 65235 57967 62337 72069 56180 67065 73869 67275 61875 69231 55089 74632 74234 47278 34934 56202 56800 65881 65323 59271 63719 72374 57672 69111 73743 68784 63859 70580 56594 71352 70307 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103900000 11921 3314 11280 22807;22808 18299 18299 1 9606 Homo sapiens -0.05061844945089433 HIYYITGETK Unmodified 1223.6186 0.61863837 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7;Q58FG0 EL52;HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 yes no 0 0 0 5.33 3.09 1 1 1 44.215 44.248 3 4.5005E-10 11142 20230619_1888_Aki_TMTPro18x_K_F8 175.93 147.13 1238000 962140 1139500 1293300 1203500 1330100 1310600 1277400 1369200 1517200 1567200 1483600 1805100 1388200 1411600 1920600 1691100 1575900 1143600 883700 1167600 1279100 1248000 1340900 1317300 1315300 1400500 1519300 1608200 1505600 1815200 1463500 1460600 1900700 1614500 1500800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 22844000000 11922 3177 11281 22809;22810;22811 18300;18301;18302 18302 3 9606 Homo sapiens 0.015773798148757123 HKEDLQPYK Unmodified 1156.5877 0.58767259 3295 O75165;B3KN02 DNAJC13 DnaJ homolog subfamily C member 13 yes no 0 0 1 7 0 1 37.808 37.872 4 0.005626 8405 20230619_1887_Aki_TMTPro18x_K_F7 88.417 52.68 57827 52107 70822 70636 96745 87516 90289 80409 96706 65307 83594 61513 64190 47101 89109 64960 57415 46791 53604 47837 71239 70023 98065 87086 91568 82252 97504 66750 85438 62237 67225 50011 88291 64065 55167 44674 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63292000 11923 3295 11282 22812 18303 18303 1 9606 Homo sapiens 0.015642265006590605 HKIPVMALVGNDAGWTQISR Unmodified 2192.1524 0.15244168 1903 A1L0T0;M0R026 ILVBL Acetolactate synthase-like protein yes no 0 0 1 5 0 1 56.781 56.843 4 1.4383E-15 16612 20230619_1885_Aki_TMTPro18x_K_F5 147.25 130.56 34354 33722 37139 37667 36095 40009 39989 39653 44272 40137 37679 37294 33352 31110 51036 29910 27491 29059 31827 30891 37484 37762 37673 40282 40232 40548 44593 40454 38817 37753 35009 32221 50171 30107 26542 27604 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117750000 11924 1903 11283 22813 18304 18304 1 9606 Homo sapiens 0.10405155402895616 HKLDVTSVEDYK Unmodified 1432.7198 0.71980898 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 1 6 0 1 46.214 46.298 3 0.00193 12258 20230619_1886_Aki_TMTPro18x_K_F6 89.629 52.936 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11925 2633 11284 22814 18305 18305 1 9606 Homo sapiens 0.0207578672695945 HKLEVLESQLSEGSQK Unmodified 1810.9425 0.94249171 1614 D6R9E3;A0A6Q8PFL9;A0A6Q8PF18;A0A6Q8PHG4;Q9BWT6;D6RCT6;A0A087WTC6 MND1 Meiotic nuclear division protein 1 homolog yes no 0 0 1 7 0 1 51.805 51.879 4 6.6111E-06 14403 20230619_1887_Aki_TMTPro18x_K_F7 116.43 100.55 121370 103080 120090 124880 112040 118370 123480 126000 159410 140660 140970 131720 156840 124550 138860 158520 148950 136530 112240 94541 121990 124270 117340 120400 124970 128590 159610 141140 146120 133950 158660 130520 142180 157470 142330 129950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88616000 11926 1614 11285 22815 18306 18306 1 9606 Homo sapiens 0.06945816001484673 HKPDFISLFK Unmodified 1230.6761 0.67609367 4301 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 1 4.5 0.5 1 1 55.349 55.387 4 0.0051027 16438 20230619_1883_Aki_TMTPro18x_K_F4 84.658 56.331 28160 21334 26639 28685 24893 27167 25069 28131 29460 31204 32321 30736 37317 29493 30507 34768 30901 35324 26015 19597 27168 28343 26007 27607 25426 28750 29897 31353 33229 31194 37583 30757 31188 34873 29593 33529 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70200000 11927 4301 11286 22816;22817 18307 18307 1 9606 Homo sapiens 0.06998266811115172 HKPGSTPEPIAAEVR Unmodified 1587.8369 0.83690442 3620 P50748 KNTC1 Kinetochore-associated protein 1 yes yes 0 0 1 6.5 0.5 1 1 36.42 36.485 4 4.0169E-05 8120 20230619_1886_Aki_TMTPro18x_K_F6 107.98 89.231 26769 20455 22299 25145 28038 27505 25921 23634 27897 26191 28175 26090 27501 22229 28576 30233 31208 32157 24708 18772 23122 25035 28597 27558 26317 24491 28322 26336 28858 26376 28136 23491 29194 30352 29841 30519 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66783000 11928 3620 11287 22818;22819 18308 18308 1 9606 Homo sapiens 0.06649944666560259 HKQEADDIVR Unmodified 1209.6102 0.61019895 558 A0A024R972;P11047 LAMC1 Laminin subunit gamma-1 yes no 0 0 1 3.5 0.5 1 1 31.338 31.413 4 9.1987E-08 6167 20230619_1882_Aki_TMTPro18x_K_F3 192.38 164.27 47885 32399 42077 43966 62903 57742 57506 57881 64458 64790 60200 48060 63409 36483 59522 53700 55853 38070 44186 29779 43541 43628 63470 57366 58494 59269 65148 64586 62028 49179 64300 38997 60351 52839 53352 36390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95898000 11929 558 11288 22820;22821 18309 18309 1 9606 Homo sapiens 0.013778258982483749 HLAAVEER Unmodified 923.48248 0.48247924 4016;645 Q58EY4;Q92922;B4DYQ1;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 no no 0 0 0 2 0.816 1 1 1 30.57 30.623 3 1.1411E-07 5941 20230619_1881_Aki_TMTPro18x_K_F2 186.09 47.264 108800 84558 113160 116940 135410 140700 130670 124120 178900 138190 172370 167750 161610 128750 142760 150160 178390 151380 100610 77689 114940 115720 138760 140090 133490 128350 179080 139890 176610 167650 164360 135240 147490 150610 170150 143870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 417300000 11930 4016;645 11289 22822;22823;22824 18310 18310 1 9606 Homo sapiens 0.01767730094900344 HLADHGQLSGIQR Unmodified 1430.7379 0.73785908 3286 O60783 MRPS14 28S ribosomal protein S14, mitochondrial yes yes 0 0 0 6.67 0.471 1 2 33.097 33.169 3;4 4.5636E-11 6590 20230619_1887_Aki_TMTPro18x_K_F7 185.9 156.56 47327 35746 48983 50146 62911 65964 62979 58956 82490 39315 42357 35008 44796 31846 42810 41583 43591 42094 43753 32851 49840 49651 64241 65329 64046 60190 81195 40750 45406 35684 45525 33507 43602 41662 41690 39981 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45188000 11931 3286 11290 22825;22826;22827 18311;18312 18311 2 9606 Homo sapiens 0.03971966492304091 HLAEHSPYYEAMK Oxidation (M) 1590.7137 0.71367774 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3;Q5CAQ4;I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 1 0 5 0.816 1 1 1 37.154 37.222 4 0.0001466 8342 20230619_1885_Aki_TMTPro18x_K_F5 105.65 64.708 95135 82262 93829 106820 113480 109460 108880 102590 126570 125250 139960 132160 130350 109550 120370 127180 134890 136210 87990 75497 95777 105870 116080 110380 110590 105930 128480 125580 142480 133090 132860 114700 123420 128020 128930 129280 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 303390000 11932 1211 11291 22828;22829;22830 18313;18314;18315 18314 747 3 9606 Homo sapiens -0.05805054776237739 HLAEHSPYYEAMK Unmodified 1574.7188 0.71876312 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3;Q5CAQ4;I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 6 0 1 40.591 40.683 4 6.0038E-08 9801 20230619_1886_Aki_TMTPro18x_K_F6 159.94 100.05 100590 86663 113570 109210 89345 113510 88474 86327 97680 128310 126910 122760 147500 140330 129380 150300 141920 147070 93146 79514 113890 108490 94792 113810 89659 91230 100330 127270 129710 125500 149120 144640 132690 150660 135700 139700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334390000 11933 1211 11291 22831 18316 18316 1 9606 Homo sapiens -0.04560750913628908 HLAELNHQK Unmodified 1088.5727 0.57269123 58 Q53FJ5;A0A024QZQ2;Q59EN5;P07602;P07602-2;P07602-3;B4DEK5;B4DRB7 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes no 0 0 0 6.5 0.5 1 1 32.963 33.025 4 4.2645E-05 6540 20230619_1887_Aki_TMTPro18x_K_F7 155.42 104.54 79604 65963 81570 77680 84022 78997 81532 85060 108140 96168 103400 117600 104720 87122 103980 116150 127450 121240 73629 60489 82686 77545 86943 79976 83205 86777 108450 97246 106470 117350 106820 92406 107100 116500 121670 115130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144100000 11934 58 11292 22832;22833 18317 18317 1 9606 Homo sapiens 0.031947794233246896 HLAEVLER Unmodified 965.52943 0.52942943 4076 Q5VTR2;Q05DC0;A0PJJ6 RNF20 E3 ubiquitin-protein ligase BRE1A yes no 0 0 0 3.5 0.5 1 1 40.093 40.142 3 0.00052712 9600 20230619_1883_Aki_TMTPro18x_K_F4 135.83 82.664 75515 52128 71922 78055 78714 83457 84761 84634 108820 88240 89728 93721 106280 89244 82949 99916 100370 103450 69731 47962 73498 76741 81401 83987 85839 86480 108700 89204 93686 94747 106850 92781 85813 100390 95890 98209 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63130000 11935 4076 11293 22834;22835 18318;18319 18319 2 9606 Homo sapiens 0.04528589646054115 HLAGLAELLPESR Unmodified 1404.7725 0.77251325 4594 Q9NU22 MDN1 Midasin yes yes 0 0 0 7 0 1 54.93 54.994 3 2.1466999999999997E-21 15713 20230619_1887_Aki_TMTPro18x_K_F7 192.15 180.23 21579 20443 21243 21961 22114 23128 22169 20519 25816 23863 22164 24884 28404 20946 27535 24982 23813 29294 19970 18722 21621 22077 22897 23253 22462 21241 25961 23975 23211 25069 28724 21973 27796 25288 22858 27758 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102650000 11936 4594 11294 22836 18320 18320 1 9606 Homo sapiens 0.08631789580408622 HLAGLGLTEAIDK Unmodified 1336.7351 0.73506511 346 P50454;A0A024R5K8;A8K259;B4DN87;E9PJH8;E9PKH2 SERPINH1 Serpin H1 yes no 0 0 0 7 0 1 52.262 52.336 3 5.5629E-06 14606 20230619_1887_Aki_TMTPro18x_K_F7 123.84 102.94 167610 126850 144000 160810 175980 200400 416960 411090 483230 220110 229740 271920 284400 230740 306000 295820 251240 295740 154740 116450 149130 160370 186750 204290 407810 400060 477300 234480 250490 272470 289550 242820 307710 296270 241220 280730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1441700000 11937 346 11295 22837 18321 18321 1 9606 Homo sapiens 0.08016698314781934 HLAILSK Unmodified 780.48577 0.48577371 3218 O14530;B8ZZX4;B7Z7A4;O14530-2 TXNDC9 Thioredoxin domain-containing protein 9 yes no 0 0 0 3 0 1 44.846 44.919 3 0.0088463 11815 20230619_1882_Aki_TMTPro18x_K_F3 94.662 58.477 129970 106290 130530 134210 137290 172670 157150 148350 192060 115430 106930 91304 91107 84183 112690 118570 124370 99579 120190 97545 132710 133730 142810 171050 158290 152350 190040 117860 112970 93657 94631 88855 114880 117520 118710 94873 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182820000 11938 3218 11296 22838 18322 18322 1 9606 Homo sapiens 0.08675024939566356 HLAPEVFR Unmodified 967.52395 0.52395013 1395 B3KSG3;F8W8M4;A0A2Z4N5U1;A0A3B3IS55;O14639-4;O14639-3;O14639-5;O14639-2;O14639-6;O14639;B4DQA3;B7Z4H1 ABLIM1 Actin-binding LIM protein 1 yes no 0 0 0 7.5 0.5 1 1 40.345 40.375 3 0.00023612 9402 20230619_1887_Aki_TMTPro18x_K_F7 155 115.85 53476 53569 54661 54976 51437 56162 57981 50983 60778 61700 74202 76434 74203 66214 76061 72580 75099 71082 49526 49031 55380 55452 53843 56620 58181 52770 62284 62235 75533 76579 75829 68944 77237 72775 71835 67544 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 126090000 11939 1395 11297 22839;22840 18323;18324 18323 2 9606 Homo sapiens 0.03888910854232108 HLAQVGDSMDR Oxidation (M) 1243.5615 0.5615342 1991 B1PL87;A8ASI8;B3KT21;P55957;P55957-2 BID BH3-interacting domain death agonist;BH3-interacting domain death agonist p15;BH3-interacting domain death agonist p13;BH3-interacting domain death agonist p11 yes no 0 1 0 2.67 0.471 1 2 30.965 31.042 3 0.00047733 5993 20230619_1881_Aki_TMTPro18x_K_F2 94.538 84.015 46491 30783 52994 50888 67036 61647 53773 64087 67910 57429 70378 71173 58153 57362 62117 51889 74383 70095 42988 28364 53468 49867 68072 61576 55467 65088 68444 58816 71566 71139 59992 59319 63711 53291 71021 66399 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 158510000 11940 1991 11298 22841;22842;22843 18325;18326;18327 18325 1255 3 9606 Homo sapiens -0.05050410733110766 HLAQVGDSMDR Unmodified 1227.5666 0.56661958 1991 B1PL87;A8ASI8;B3KT21;P55957;P55957-2 BID BH3-interacting domain death agonist;BH3-interacting domain death agonist p15;BH3-interacting domain death agonist p13;BH3-interacting domain death agonist p11 yes no 0 0 0 3 0 1 35.404 35.461 3 4.2481E-17 7735 20230619_1882_Aki_TMTPro18x_K_F3 189.58 172.56 61530 43237 59403 52218 68148 73872 68332 80134 92047 72032 78109 68313 77965 62636 66807 72925 86576 62007 56829 39685 60609 52318 70133 73194 69637 81135 91813 73147 80704 69376 79047 65345 69244 72502 82474 59100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202240000 11941 1991 11298 22844 18328 18328 1 9606 Homo sapiens -0.03806106870501935 HLCAVYYNK Unmodified 1166.5543 0.55426398 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 2.5 0.5 1 1 42.314 42.387 3 0.00055698 10913 20230619_1881_Aki_TMTPro18x_K_F2 110.81 98.644 448890 326720 386140 460780 420150 471500 428810 460510 536780 377550 383300 313000 351510 265070 444810 336620 365430 324340 414310 300330 398410 454260 434350 475550 435210 468970 534140 384310 398820 319340 363950 279010 445680 336800 350130 308340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 319120000 11942 4414 11299 22845;22846 18329;18330 18329 2 9606 Homo sapiens -0.02235098542905689 HLCEPGADGAETFADGVPR Unmodified 1997.8901 0.89013856 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y7I0;A0A2R8Y7M9;Q8TDI0;A0A2R8Y5M9;K7EMY3;Q659D0;Q659F1;A0A2R8YE38;Q6ZU36 CHD4;CHD5;DKFZp434P202;DKFZp434K213 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 yes no 0 0 0 2 0.816 1 1 1 46.517 46.569 3 4.4787E-31 12854 20230619_1881_Aki_TMTPro18x_K_F2 222.3 211.02 133910 118360 140840 142290 130750 133720 140890 145860 150900 175620 139400 141110 167050 132620 126220 184160 179200 149730 123940 108530 142330 141670 136770 136210 141850 148950 152950 174780 144760 144530 167670 139830 132300 182140 170740 142690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 700280000 11943 1005 11300 22847;22848;22849 18331;18332 18331 2 9606 Homo sapiens -0.0688909040377439 HLCQQLQAEQAAAEK Unmodified 1723.8312 0.83116712 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;H0YFY6;Q96HN5;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 4.5 0.5 1 1 43.191 43.254 3 3.0908E-42 10864 20230619_1885_Aki_TMTPro18x_K_F5 220.99 196.43 95940 81619 89114 94302 93705 100380 107620 97820 99751 108720 113260 110500 124260 98134 102440 132580 118320 115970 88683 74825 91197 94296 97289 101020 107460 100430 102660 109320 116030 111740 125380 103460 105590 131660 113040 110340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 544330000 11944 349;3906 11301 22850;22851 18333 18333 1 9606 Homo sapiens -0.0017952190742107632 HLDACETMGNATAICSDK Unmodified 1992.8339 0.83394559 664 P20020-1;P20020;P20020-4;P20020-6;P20020-2;P20020-5;A0A024RBC7;E7ERY9;Q59H63;A0A2U3U055;A0A994J581;Q68DH9;Q4LE63;A8K8U3;A7E2D8;Q01814-8;A0A2U3TZI3;A0A994J5M1;Q4J697;A0A2R8Y4R4;A1L3B5;A0A804HKZ0;Q01814;Q16720-4;P23634-6;A0A024R968;P23634;Q16720;Q01814-2;Q01814-6;P23634-7;Q16720-8;P23634-5;Q16720-7;Q16720-6;A0A024R2E4;Q01814-5;Q01814-4;P23634-3;Q16720-3;Q01814-7;Q16720-5;P23634-8;P23634-2;Q01814-3;P23634-4;Q16720-2 ATP2B1;DKFZp686M088;ATP2B2 variant protein;ATP2B4;ATP2B2;PMCA2;ATP2B3 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2;Plasma membrane calcium-transporting ATPase 3;Plasma membrane calcium-transporting ATPase 4 yes no 0 0 0 4.33 0.471 2 1 45.937 45.997 3 1.2452E-06 12082 20230619_1885_Aki_TMTPro18x_K_F5 108.34 99.843 8566.6 7876.4 9686.5 9596.6 9927.1 13103 11619 11419 14066 12258 9193.4 10592 13369 9972.8 8575.8 15187 14409 12075 7936 7222.5 9754.2 9596.4 10354 12939 11689 11800 14003 12299 9849.4 10809 13285 10587 9161.9 14983 13714 11510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84308000 11945 664 11302 22852;22853;22854 18334;18335 18335 2 9606 Homo sapiens -0.12275802627050325 HLDALLK Unmodified 808.48069 0.48068833 3977 Q68DW7;Q4LE48;Q8WVM7-2;Q8WVM7;B4E2Q7 DKFZp781D1416;STAG1 variant protein;STAG1 Cohesin subunit SA-1 yes no 0 0 0 8 0 1 47.116 47.164 3 0.0058537 12353 20230619_1888_Aki_TMTPro18x_K_F8 104.21 37.216 79774 58492 67418 79615 80628 82815 87715 81490 98542 79987 83669 83479 89764 68529 75391 100470 90196 85335 73622 53744 69785 78682 82880 83472 88327 83332 99139 81054 86801 84136 90707 72880 77871 99524 86122 81230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66089000 11946 3977 11303 22855 18336 18336 1 9606 Homo sapiens 0.06878721076952843 HLDGEEDGSSDQSQASGTTGGR Unmodified 2189.9057 0.90572486 599 Q9UNF1;A0A024R9Y7;Q5H907;Q5H909;Q9UNF1-2 MAGED2 Melanoma-associated antigen D2 yes no 0 0 0 1 0 1 30.691 30.691 3 3.4714E-110 6256 20230619_1880_Aki_TMTPro18x_K_F1 367.11 356.73 10894 6294.8 12720 14287 16374 13506 10589 10275 17184 13274 17110 17534 16120 15898 12413 11188 18963 21196 10069 5833.1 12823 13741 16537 13643 11221 10812 17119 13399 17508 17537 16328 16208 13042 11883 18096 20018 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50962000 11947 599 11304 22856 18337 18337 1 9606 Homo sapiens -0.14163177143700523 HLDGEEDGSSDQSQASGTTGGRR Unmodified 2346.0068 0.0068358901 599 Q9UNF1;A0A024R9Y7;Q5H907;Q5H909;Q9UNF1-2 MAGED2 Melanoma-associated antigen D2 yes no 0 0 1 1 0 1 27.788 27.788 4 4.905999999999999E-19 5152 20230619_1880_Aki_TMTPro18x_K_F1 145.75 133.09 0 0 1242.3 2209.6 1358.7 835.51 2043.6 1178.8 2242.3 1511.2 921.82 1886 1197.2 1348.2 1776 1599.3 2283.4 0 0 0 1166.5 2025.1 1411.1 954.37 2022.9 1195 2219.2 1522.1 1028.4 1875.1 1244.8 1416.6 1821.8 1515.6 2164.1 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 3393400 11948 599 11305 22857 18338 18338 1 9606 Homo sapiens -0.11232725440959257 HLDHVAALFPGDVDR Unmodified 1660.8322 0.8321534 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 5.5 0.5 1 1 48.007 48.085 4 5.2308E-08 13060 20230619_1886_Aki_TMTPro18x_K_F6 140.31 124.08 37338 29399 35755 41918 44138 42784 42446 44238 51669 51592 55040 58431 52438 51269 54572 66918 68438 63878 34505 27019 36609 41299 45106 43237 43187 45290 52259 51953 56230 58780 53768 53907 56288 66787 65316 60721 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 387670000 11949 3432 11306 22858;22859 18339;18340 18340 2 9606 Homo sapiens 0.028170605237846758 HLDIEDK Unmodified 868.42905 0.42904669 2760 C9JRZ6 CHCHD3 yes yes 0 0 0 2.5 0.5 1 1 40.993 41.059 3 0.0017982 10275 20230619_1881_Aki_TMTPro18x_K_F2 133.6 64.217 501150 356280 485750 465290 277520 259170 355290 376240 459340 505400 664290 620890 615910 518840 554300 594140 748890 632120 462900 327260 491260 458490 306680 280630 357590 380060 470010 507130 669370 621830 627260 542530 575630 597900 713850 600410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 414150000 11950 2760 11307 22860;22861 18341;18342 18341 2 9606 Homo sapiens -0.010430674076133073 HLDLSNVAGYK Unmodified 1215.6248 0.62478638 1156 Q6FIA3;A0A0U1RR22;Q9UNF0-2;Q9UNF0;A0A024R4X1 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 yes no 0 0 0 4.5 3.5 1 1 49.518 49.554 3 3.5639E-05 14169 20230619_1880_Aki_TMTPro18x_K_F1 128.28 100.76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11951 1156 11308 22862;22863 18343;18344 18343 2 9606 Homo sapiens 0.025598980464110355 HLDQIIPR Unmodified 990.56106 0.56106391 2863 E1NZA1;Q92616;B4DM32 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 7.5 0.5 1 1 42.939 42.983 3 0.00077352 10487 20230619_1887_Aki_TMTPro18x_K_F7 121.96 28.405 71963 60262 69190 70741 71321 82572 78217 74059 93666 81466 86976 83737 89155 80029 80437 90085 89244 85479 66531 55257 70565 70746 74153 82406 78936 76456 94247 82050 89621 84804 90546 83179 82485 90092 85277 81251 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 163880000 11952 2863 11309 22864;22865 18345;18346 18345 2 9606 Homo sapiens 0.06540582399986761 HLDVMDLSK Unmodified 1056.5274 0.52738052 584 H3BSW0;A0A024R9M3;A0A3B3ISV5;Q8N9N7 LRRC57 Leucine-rich repeat-containing protein 57 yes no 0 0 0 6 0 1 49.98 50.056 3 0.014941 13918 20230619_1886_Aki_TMTPro18x_K_F6 72.006 47.214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11953 584 11310 22866 18347 18347 1 9606 Homo sapiens 0.0013779284590782481 HLEAILTK Unmodified 923.54402 0.54401687 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 4.5 3.5 1 1 47.584 47.613 3 0.00011193 12516 20230619_1888_Aki_TMTPro18x_K_F8 164.96 109.42 124160 93555 108160 117610 124770 142100 137920 136880 149490 148530 150240 145610 165020 134500 146850 171070 154730 144000 114630 85879 111520 117110 128700 141690 138640 140480 151710 149400 154730 147640 167050 141020 150210 169750 147890 137100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 208510000 11954 2332 11311 22867;22868 18348;18349 18349 2 9606 Homo sapiens 0.07918661794178661 HLEALCLFK Unmodified 1129.5954 0.59540051 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPW9;A0A8V8TPX4;A0A8V8TRC7;H7C3P6;A0A8V8TQG1 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 2 0 1 55.696 55.717 3 0.0027446 16905 20230619_1881_Aki_TMTPro18x_K_F2 85.67 58.189 102040 76841 90258 109170 86831 105450 98622 110600 118250 97501 98277 107690 108080 100480 81146 98978 95105 98460 94213 70630 92737 107500 90912 106970 99396 112280 118510 99578 102230 108590 108790 103750 83858 99430 90884 93511 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 469250000 11955 1852 11312 22869 18350;18351 18351 2 9606 Homo sapiens 0.03578662496556717 HLEEIVHVEQGR Unmodified 1444.7423 0.74227576 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;Q01433-5;Q01433-3;Q01433-4;A0A7P0Z4H6;H0YF16;A0A804H2H4;A0A590UJX5;A0A590UK85 AMPD2 AMP deaminase 2 yes no 0 0 0 2.5 0.5 1 1 39.887 39.95 4 6.6483E-10 9565 20230619_1882_Aki_TMTPro18x_K_F3 185.3 168.27 39895 37296 43687 49741 51233 55205 50982 48048 57970 62611 71705 69693 60906 58152 52666 67888 57089 66472 36952 34230 44214 49262 52595 55246 51642 49985 59216 62709 72419 70041 62145 60842 54036 67947 54645 63116 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280290000 11956 1570 11313 22870;22871 18352 18352 1 9606 Homo sapiens 0.037694309152357164 HLEFMNQLK Unmodified 1158.5856 0.5855641 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 0 1.5 0.5 1 1 50.391 50.417 3 4.9185E-06 14517 20230619_1880_Aki_TMTPro18x_K_F1 148.52 110.97 71706 59883 64590 75518 55513 68630 68537 71248 78255 63553 64025 59518 64655 57704 69826 74652 69002 68312 66259 54949 66141 74884 58814 69962 68667 72417 78558 64544 66380 60598 66240 60463 70895 74380 66024 64953 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141260000 11957 3808 11314 22872;22873 18353 18353 1 9606 Homo sapiens 0.012614744912070819 HLEINPDHPIVETLR Unmodified 1781.9424 0.94243213 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 0 5 1.22 1 2 2 2 1 46.163 46.235 3;4 5.4475E-42 12214 20230619_1883_Aki_TMTPro18x_K_F4 224.06 189.8 495480 438070 552350 522120 434410 562030 480110 517670 677650 725350 673090 596000 777610 513870 565920 814530 748550 742900 458820 401660 554430 521070 462660 564190 487940 537270 679490 718000 694520 608560 779420 549430 590650 808830 714410 706390 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 76819000000 11958 751 11315 22874;22875;22876;22877;22878;22879;22880;22881 18354;18355;18356;18357 18354 4 9606 Homo sapiens 0.08273860792155574 HLEINPDHSIIETLR Unmodified 1785.9373 0.93734675 3177 K9JA46;P07900;P07900-2;Q8TBA7;O75322;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 4.71 1.03 1 2 2 2 49.098 49.164 3;4 4.1566E-42 13421 20230619_1885_Aki_TMTPro18x_K_F5 240.2 226.33 815350 655460 716450 861730 693740 867160 675000 641840 996930 1005100 940950 972580 1143100 970080 754070 1231300 1130500 1150300 753090 601810 736520 852860 723630 871120 691750 681400 995820 995880 976490 988840 1142100 1014500 797040 1227100 1078100 1093400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 42110000000 11959 3177 11316 22882;22883;22884;22885;22886;22887;22888 18358;18359;18360;18361 18361 4 9606 Homo sapiens 0.07581556929562794 HLEMNPHFGSHR Oxidation (M) 1476.6681 0.66806496 3811 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 1 0 6 0 1 27.351 27.384 4 3.1148E-07 4881 20230619_1886_Aki_TMTPro18x_K_F6 163.71 139.29 23761 21096 23065 31767 29010 30202 31021 31229 27220 26434 30102 32999 28269 22903 24147 31622 27845 34032 21978 19392 23631 31160 29686 30675 31045 31717 28058 27155 30689 32862 28707 24422 24876 31747 26649 32276 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85196000 11960 3811 11317 22889 18362 18362 2489 1 9606 Homo sapiens -0.05120235447952837 HLEMNPHFGSHR Unmodified 1460.6732 0.67315033 3811 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 8 0 1 32.538 32.538 3 0.043662 6547 20230619_1888_Aki_TMTPro18x_K_F8 48.704 35.724 8653 5783.2 11473 12623 11983 13388 13032 16332 11114 9998.2 13643 14160 14480 11837 12754 11003 15506 13264 8013.7 5351.4 11436 12186 12420 13531 13034 16304 11524 10562 13920 14110 14667 12245 13140 11205 14794 12583 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10164000 11961 3811 11317 22890 18363 18363 1 9606 Homo sapiens -0.038759315853212684 HLENNYR Unmodified 944.44643 0.44642809 4298 Q92604 LPGAT1 Acyl-CoA:lysophosphatidylglycerol acyltransferase 1 yes yes 0 0 0 4 0 1 23.247 23.314 3 0.0065849 3895 20230619_1883_Aki_TMTPro18x_K_F4 100.74 79.84 11768 7787.1 12861 11871 13149 16755 15258 15789 20184 15308 19218 18533 17599 13897 15316 11915 20989 18040 10877 7167.8 12977 11715 13714 16536 15414 16178 20219 15602 19683 18503 17902 14396 15906 12361 20007 17081 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8356900 11962 4298 11318 22891 18364 18364 1 9606 Homo sapiens -0.028017270819532314 HLEPEPEEEIIAEDYDDDPVDYEATR Unmodified 3088.3309 0.33091495 1105 A0A0S2Z4V5;A0A0S2Z556;O60828-5;O60828-2;O60828;O60828-4;A0A5H1ZRR1;O60828-3;Q4VY28;O60828-10;O60828-9;O60828-8;O60828-7;O60828-6 PQBP1 Polyglutamine-binding protein 1 yes no 0 0 0 1 0 1 57.71 57.71 3 1.3160000000000001E-20 17531 20230619_1880_Aki_TMTPro18x_K_F1 161.04 154.53 6226.8 3918.2 5647.5 7563.6 4857.9 6205 4344.2 5095.9 8366.1 9538.4 7071.7 8868.5 9919.9 8138.7 9199.6 8212 8497.3 9568 5745 3619.3 5783.5 7310.8 5112.1 6346 4538.2 5403.1 8258.6 9382.9 7453.3 8993.4 9996.8 8428.4 9323 8331.2 8144.4 9069.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191240000 11963 1105 11319 22892 18365 18365 1 9606 Homo sapiens -0.12971727097692565 HLESFPK Unmodified 856.4443 0.44430282 4303 Q92665 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 0 0 0 6.5 0.5 1 1 41.172 41.255 3 0.0063847 9770 20230619_1887_Aki_TMTPro18x_K_F7 95.352 48.689 44379 37957 43577 40298 48178 49366 50039 49564 59780 71352 76348 77803 86128 72124 56915 82475 90329 84554 41041 34771 44380 40656 49710 49266 50662 51189 61068 71125 77948 78496 86219 75139 60370 82756 86063 80309 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38573000 11964 4303 11320 22893;22894 18366 18366 1 9606 Homo sapiens 0.010338441802446141 HLETFEHPNVVR Unmodified 1476.7474 0.74736113 3773 Q00534 CDK6 Cyclin-dependent kinase 6 yes yes 0 0 0 4.5 0.5 1 1 38.08 38.148 4 4.1317E-13 8770 20230619_1883_Aki_TMTPro18x_K_F4 172.13 132.21 284240 213610 273540 319340 315120 333670 312260 308190 407670 309710 282950 251190 304060 244490 272700 314000 327400 293810 262610 196460 279640 313810 324010 335670 317860 316690 404790 311410 296860 257590 308200 256210 281090 313170 312490 279400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 324910000 11965 3773 11321 22895;22896 18367;18368 18367 2 9606 Homo sapiens 0.02805734777825819 HLEVLNVSENK Unmodified 1280.6725 0.67246486 1356 Q15813-2;Q15813;A0A2R8Y5Q8;A0A2R8YHI9;A0A2R8Y7E7;A0A2R8YER9;A0A2R8YFL4;A0A2R8Y809;A0A2R8Y4V6;A0A2R8Y6Q1;A0A2R8Y6L2;B7Z4X8;A0A2R8Y4E7;A0A2R8Y897 TBCE Tubulin-specific chaperone E yes no 0 0 0 5.5 0.5 1 1 45.883 45.965 3 0.0088809 12053 20230619_1885_Aki_TMTPro18x_K_F5 68.536 56.31 222610 201850 240720 263010 243520 282270 280390 257670 324530 275880 263850 271270 284950 238000 276060 300770 332680 297880 206120 185230 243250 260780 253790 283360 281860 265520 325630 277830 274580 274480 289810 249950 284110 301000 317520 283080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 858710000 11966 1356 11322 22897;22898 18369;18370 18369 2 9606 Homo sapiens 0.043355522466072216 HLFAPLK Unmodified 824.49086 0.49085908 4759 Q9Y6K1;A0A0C4DG02;Q9Y6K1-2;Q6PJ37;Q8WVA9;Q9UBC3-3;Q9UBC3-8;Q9UBC3-2;Q9UBC3-6;Q9UBC3;A0A8Q3SIG2;A0A2Z2CIT2;Q9UBC3-7;B3KM53 DNMT3A;DNMT3B DNA (cytosine-5)-methyltransferase 3A;DNA (cytosine-5)-methyltransferase 3B yes no 0 0 0 4 0 1 47.615 47.655 3 0.021327 12936 20230619_1883_Aki_TMTPro18x_K_F4 74.717 35.499 43095 49220 38555 30942 68259 118010 56724 54571 128340 32985 27132 32162 33936 28973 31416 31168 35701 36239 39913 44888 40005 33905 68751 111190 59936 59479 122370 34757 32906 32572 34360 30120 32224 31572 34121 34364 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20397000 11967 4759 11323 22899 18371 18371 1 9606 Homo sapiens 0.07159328802174514 HLFCPDLLR Unmodified 1169.6015 0.60154852 1045 G3V0I9;A0A0J9YXZ6;A0A0J9YY83;A0A0J9YWI0;Q4VXZ8;Q9NUI1-2;Q9NUI1 DECR2 Peroxisomal 2,4-dienoyl-CoA reductase yes no 0 0 0 1 0 1 50.649 50.649 3 0.014341 14620 20230619_1880_Aki_TMTPro18x_K_F1 72.643 56.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11968 1045 11324 22900 18372 18372 1 9606 Homo sapiens 0.023531807280960493 HLFGQPNSAYDFK Unmodified 1522.7205 0.72047768 128 O95347;A0A024R158;B7ZLZ7;B3KMB1;O95347-2;B3KM27;A0A0C4DGE5 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 1 0 1 50.855 50.855 3 3.9193E-06 14698 20230619_1880_Aki_TMTPro18x_K_F1 130.4 116.44 59560 47098 53875 56009 53588 52622 50582 55346 59730 67289 61217 58108 66638 60399 57376 72259 65523 67202 55018 43201 55189 55804 55582 53563 51498 56662 60463 67076 62949 59501 67430 62843 59040 72099 62625 63876 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161660000 11969 128 11325 22901 18373 18373 1 9606 Homo sapiens -0.019973738333646907 HLFLTSK Unmodified 844.48069 0.48068833 3129 J3KQ32;Q9NTK5;Q53SQ6;Q9NTK5-2;B4DK14;Q9NTK5-3;C9JCJ9 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 0 3.5 0.5 1 1 44.687 44.746 3 0.00099924 11604 20230619_1883_Aki_TMTPro18x_K_F4 154.35 79.04 652240 523260 560350 648600 600130 702790 646570 639970 725290 780160 819780 766970 829320 685990 680050 865070 871230 838590 602330 480140 578040 645300 622070 705060 651790 661930 738510 780500 836530 776770 839010 719850 705720 864410 831520 796900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 580740000 11970 3129 11326 22902;22903 18374;18375;18376 18376 3 9606 Homo sapiens 0.05222721076950165 HLFTPADK Unmodified 927.48142 0.48141661 2170 A8QI98;Q9Y2L1;Q49AG4;G3V1J5;Q9Y2L1-2;F2Z2C0;A0A024R643 DIS3;KIAA1008 Exosome complex exonuclease RRP44 yes no 0 0 0 7 0 1 41.981 42.052 3 0.0047381 10147 20230619_1887_Aki_TMTPro18x_K_F7 82.279 43.131 59813 47290 53822 65128 68302 72616 72593 72977 81273 69945 83851 71540 72879 63305 78611 67119 75155 62165 55250 43443 55463 64379 69909 72858 73202 74444 82347 70916 85362 72317 74998 65759 79577 67164 71851 59145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36294000 11971 2170 11327 22904 18377 18377 1 9606 Homo sapiens 0.01477515725991907 HLGAVNTIVFVDENRR Unmodified 1838.9751 0.97512924 3280 Q59H56;Q5SRN1;Q53H60;O60508 CDC40 Pre-mRNA-processing factor 17 yes no 0 0 1 1 0 1 46.243 46.243 4 3.3659E-08 12826 20230619_1880_Aki_TMTPro18x_K_F1 134.88 109.83 69286 44824 71600 70953 61605 70854 74333 68848 88541 103840 121640 130510 146330 118200 89728 132070 154520 152040 64001 41282 72390 69484 65153 71579 74685 71446 90768 103870 124300 130850 145870 123120 96038 133480 147200 144200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55444000 11972 3280 11328 22905 18378 18378 1 9606 Homo sapiens 0.08920067915050822 HLGAYELLLK Unmodified 1155.6652 0.66519463 2801 CON__Q3T052 yes yes 0 0 0 2 0 1 55.539 55.56 3 0.00047315 16819 20230619_1881_Aki_TMTPro18x_K_F2 90.108 57.887 + 26245 23956 25727 26360 44150 51164 39749 36411 54457 34127 49501 63721 35413 32550 55013 38286 43750 59892 24281 21946 26469 26741 44327 49510 40752 38158 54349 35543 50531 62228 37529 34902 54889 39639 42080 56598 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27127000 11973 2801 11329 22906 18379 18379 1 0.09358864436853764 HLGGGEGQKPGGNIR Unmodified 1475.7593 0.7593228 4612 Q9NWD9 BEX4 Protein BEX4 yes yes 0 0 1 8 0 1 32.725 32.725 4 0.01073 6610 20230619_1888_Aki_TMTPro18x_K_F8 68.972 56.205 12391 9569.6 12099 13821 9599.7 9889.7 13983 11057 16901 13273 15926 13265 11619 10350 11720 11987 14496 13056 11451 8796.9 12288 13553 10284 10326 13928 11291 16989 13302 16178 13373 12006 10859 12071 12079 13833 12395 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3593600 11974 4612 11330 22907 18380 18380 1 9606 Homo sapiens 0.04047351521035125 HLGGHEGTIPSKV Unmodified 1330.6993 0.69934831 805 E9KL42;A0A087WT95;Q86TX2;P49753;G3V4F2;B7ZMC1;B4DV16;B3KSA0;P49753-2 ACOT2;ACOT1 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial yes no 0 0 1 7 0 1 37.406 37.471 4 0.0019381 8248 20230619_1887_Aki_TMTPro18x_K_F7 80.014 63.761 39723 30386 29189 35709 39819 40546 42880 43344 47792 48660 48771 51270 52600 43563 39035 51960 57450 60113 36635 27873 30728 35691 40603 40710 43197 44219 48468 48962 50161 51659 52927 45655 41020 52494 54808 57000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47647000 11975 805 11331 22908 18381 18381 1 9606 Homo sapiens 0.04722660857783012 HLGGIPWTYAEDAVPTLTPCR Unmodified 2353.1525 0.15250126 3533 P31930;B4DUL5 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 1 0 1 61.532 61.532 3 4.9582E-05 19155 20230619_1880_Aki_TMTPro18x_K_F1 83.776 74.361 11909 10182 11647 11959 11946 11682 12050 13403 15445 12225 13380 14511 15024 11981 13064 14204 13516 16629 11013 9336.1 11857 11933 12382 11879 12253 13540 15452 12490 13903 14542 15183 12566 13351 14370 12950 15757 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125740000 11976 3533 11332 22909 18382 18382 1 9606 Homo sapiens 0.030051106121845805 HLGLEIPAWDGPR Unmodified 1459.7572 0.75719754 4238 Q8N6T7-2;Q8N6T7;B4DDV3;M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 yes no 0 0 0 7 0 1 55.395 55.456 3 0.0057842 15964 20230619_1887_Aki_TMTPro18x_K_F7 55.724 29.126 51342 38981 44410 46871 42632 53366 48044 52602 59031 57841 58119 49741 61922 47663 56846 65343 57549 60378 47400 35765 45683 46780 44653 53439 48488 53906 59488 57934 59781 50846 62800 50197 57982 65074 55075 57389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49002000 11977 4238 11333 22910 18383 18383 1 9606 Homo sapiens 0.045709227832276156 HLGNAVK Unmodified 737.41842 0.41842242 2240 B4DXX1;B2R713;Q7Z2T5;Q7Z2T5-2 TRMT1L TRMT1-like protein yes no 0 0 0 1 0 1 33.302 33.302 3 0.03679 7296 20230619_1880_Aki_TMTPro18x_K_F1 70.912 45.086 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11978 2240 11334 22911 18384 18384 1 9606 Homo sapiens 0.039209947286167335 HLGVCISVANNR Unmodified 1338.6827 0.68265239 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PEX7;B4DMD1;A0A6Q8PHG0 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 6 1.29 1 1 2 1 1 40.596 40.658 3 6.2511E-07 9703 20230619_1888_Aki_TMTPro18x_K_F8 146.79 0 197720 132240 229080 209200 228600 215910 222770 221810 252400 184380 255080 275450 228850 216450 237020 195970 292960 267710 182860 121770 229910 205020 236970 217950 225980 225280 255230 191190 260610 273420 234990 224070 243710 201440 279590 253600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 398310000 11979 3254 11335 22912;22913;22914;22915;22916;22917 18385;18386;18387 18387 3 9606 Homo sapiens 0.026858367001750594 HLGYKPEEYK Unmodified 1262.6295 0.62953741 2684 B7Z9C0;D3DTH7;F5H6E2;B7Z3E5;O00159-2;O00159-3;O00159 MYO1C Unconventional myosin-Ic yes no 0 0 1 7.5 0.5 1 1 40.702 40.732 4 0.00068812 9523 20230619_1887_Aki_TMTPro18x_K_F7 113.93 92.377 52033 43832 51296 46730 49920 58167 58416 51424 67704 71963 72522 63647 81501 61411 66306 84472 77059 72052 48117 40156 52130 47134 52222 57811 58688 53551 68672 71388 74500 64969 82124 64668 68384 83767 73591 68586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102220000 11980 2684 11336 22918;22919 18388 18388 1 9606 Homo sapiens 0.008727821891852727 HLILPEK Unmodified 848.51199 0.51198846 3312 O75643;A4FU77;A0A494C1A5 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 7.5 0.5 1 1 44.816 44.873 3 0.013277 11456 20230619_1888_Aki_TMTPro18x_K_F8 81.381 16.605 187270 133780 142660 160740 170550 207180 192310 206890 206380 190930 179150 230550 241700 187530 177520 220470 220830 232690 172690 122780 149200 160740 175790 205910 193060 210870 208450 195000 188140 230640 241570 196670 184260 221590 210950 220830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 269410000 11981 3312 11337 22920;22921 18389 18389 1 9606 Homo sapiens 0.08167294111046886 HLIPAANTGESK Unmodified 1236.6463 0.64625011 3709 V9HW98;P62258;G9K389;G9K388;P62258-2;B7ZA86 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 0 0 6.5 1.12 1 1 1 1 39.259 39.317 3 4.6683E-07 8909 20230619_1887_Aki_TMTPro18x_K_F7 152.67 130.2 134790 104940 120100 124330 139210 134380 134670 130840 143400 159120 181660 170520 180880 148640 155670 180500 191570 167820 124490 96258 123510 124130 142840 135120 136360 134680 147190 159610 184450 171920 183410 155730 160850 180100 182780 159610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6859299999.999999 11982 3709 11338 22922;22923;22924;22925 18390;18391 18391 2 9606 Homo sapiens 0.037392830751286965 HLIPMNPNDDSLFK Oxidation (M) 1655.7977 0.79774172 3894 Q14651;C9JAM8 PLS1 Plastin-1 yes no 0 1 0 6.5 0.5 1 1 52.205 52.281 3 0.010906 14611 20230619_1887_Aki_TMTPro18x_K_F7 62.287 49.41 72947 62865 73993 69189 74431 76698 77037 72850 86512 70686 80695 77855 78295 65775 74897 90289 83251 81775 67482 57604 75045 69494 77306 76938 77828 74651 87310 71801 82947 78363 79830 69527 76768 89816 79563 77766 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96103000 11983 3894 11339 22926;22927 18392 18392 2574 1 9606 Homo sapiens -0.003925236793293152 HLITTQTEHK Unmodified 1206.6357 0.63568542 2222 Q5QP19;Q53FP3;B2R5S3;Q9Y697-2;Q9Y697;A2A2M1;F2Z2E7 NFS1 Cysteine desulfurase, mitochondrial yes no 0 0 0 7 0 1 32.976 33.063 4 7.175E-08 6532 20230619_1887_Aki_TMTPro18x_K_F7 169.37 152.01 42730 35133 36505 40153 49656 43449 47918 43320 58948 46056 52868 39891 49554 40164 37086 38378 50110 56578 39465 32209 37809 40191 50430 43724 48730 44347 59141 46248 54272 40817 50084 41381 38658 39606 47864 53522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30905000 11984 2222 11340 22928 18393 18393 1 9606 Homo sapiens 0.040633004206938494 HLIVLINK Unmodified 948.61204 0.61203685 3455;2572 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6;B4DQM6;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B no no 0 0 0 6 1 1 1 50.376 50.455 3 3.2055E-14 13944 20230619_1885_Aki_TMTPro18x_K_F5 166.34 91.228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11985 3455;2572 11341 22929;22930 18394;18395 18394 2 9606 Homo sapiens 0.1356753144484628 HLLDRDPLTK Unmodified 1206.6721 0.67207093 4655 Q9UBL6;Q9UBL6-2;E9PJ31 CPNE7 Copine-7 yes no 0 0 1 8 0 1 43.463 43.473 4 0.0011552 10888 20230619_1888_Aki_TMTPro18x_K_F8 103.43 72.743 44208 38180 42002 42394 33540 40205 42025 34369 51091 39783 47513 43544 49312 40357 44508 51077 55540 43947 40875 34987 42727 42453 35778 40699 42156 35703 51340 40069 48966 43965 50046 42293 45983 50741 52954 41859 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30981000 11986 4655 11342 22931 18396 18396 1 9606 Homo sapiens 0.07700177317406087 HLLENAK Unmodified 823.4552 0.45520186 2423 B3KV62;D3DPR0;Q96A70-3;Q96A70-4;Q96A70;Q96A70-2 ADC;AZIN2 Antizyme inhibitor 2 yes no 0 0 0 5.5 0.5 1 1 35.234 35.287 3 0.0044622 7764 20230619_1886_Aki_TMTPro18x_K_F6 110.81 0 59463 27262 59538 57517 57619 67682 58519 72435 82643 64191 86750 101610 92407 79665 78144 50680 120800 109970 54834 25264 60432 55698 60103 67702 59752 73418 82901 66466 89138 100590 93500 81434 81895 54807 115090 103870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120210000 11987 2423 11343 22932;22933 18397;18398 18398 2 9606 Homo sapiens 0.036412465545254236 HLLGAEHGDEPR Unmodified 1329.6426 0.64256171 922 U3KQC1;A0A0A0MQU0;Q9BV38;K7EIR0 WDR18 WD repeat-containing protein 18 yes no 0 0 0 2 0.816 1 1 1 30.451 30.504 4 5.7174E-13 5878 20230619_1881_Aki_TMTPro18x_K_F2 170.04 145.19 64113 40968 51614 52664 60495 58827 46683 43441 84151 63510 79329 75073 79981 68824 50885 68937 69092 60989 59106 37643 53582 52293 61819 58695 49029 46008 83343 63547 81550 75480 80239 71177 53357 68795 65874 58041 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 102910000 11988 922 11344 22934;22935;22936 18399;18400;18401 18400 3 9606 Homo sapiens -0.00907386698713708 HLLIAQELADR Unmodified 1277.7092 0.70918471 933 A0A0A0MRC4;Q86YR5;A0A0A0MSK4;Q86YR5-4;Q86YR5-3;A0A087WVF5 GPSM1 G-protein-signaling modulator 1 yes no 0 0 0 5.5 0.5 1 1 47.951 48.029 3 4.1156E-09 12916 20230619_1885_Aki_TMTPro18x_K_F5 178.54 139.58 71269 60208 74081 76338 76410 78687 78962 79019 110330 104300 126750 119970 114540 101540 141050 104570 106710 114780 65936 55248 75059 75806 79253 79420 80459 81388 111220 104550 128740 120450 118520 105490 140870 105740 102490 108880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 128080000 11989 933 11345 22937;22938 18402;18403 18402 2 9606 Homo sapiens 0.08143848863187486 HLLIGVSSDR Unmodified 1095.6037 0.60365701 2521;3555 P36542-2;B4DL14;B4DFE6;Q8TAS0;P36542 ATP5C1 ATP synthase subunit gamma, mitochondrial;ATP synthase subunit gamma no no 0 0 0 7.5 0.5 1 1 41.172 41.204 3 2.3186E-10 9961 20230619_1888_Aki_TMTPro18x_K_F8 176.33 145.76 67037 55423 60223 66466 62524 76073 74882 61234 75066 72302 73732 74338 68132 60935 74146 73897 82067 83741 61939 50833 61832 66330 65149 75848 74760 63928 76403 72558 75498 74908 70032 63989 75727 74602 78456 79428 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 297570000 11990 2521;3555 11346 22939;22940 18404;18405 18405 2 9606 Homo sapiens 0.059679327375761204 HLLNSPTDPFNR Unmodified 1409.7052 0.70516197 2652 B4E2Y2;O95155-3;O95155-2;O95155;O95155-4 UBE4B Ubiquitin conjugation factor E4 B yes no 0 0 0 8 0 1 46.081 46.119 3 0.00017052 11945 20230619_1888_Aki_TMTPro18x_K_F8 84.999 64.142 42924 34405 38233 41212 37064 42189 44621 42468 49789 53986 58064 60396 64278 48180 46787 59814 55851 62462 39650 31559 39233 41080 38817 42598 44717 43686 50778 54124 59450 60598 64527 50747 48459 60030 53396 59275 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41701000 11991 2652 11347 22941 18406 18406 1 9606 Homo sapiens 0.0166975936945164 HLLPTSGAAATAAAAAAAAAAVTAASTSYYGR Unmodified 2904.473 0.47298377 2142 A8K9U0;Q9BWF3;E9PB51 RBM4 RNA-binding protein 4 no no 0 0 0 8 0 1 63.971 63.994 3 1.0292E-65 19535 20230619_1888_Aki_TMTPro18x_K_F8 247.78 241.13 5610.4 4313.9 5285.5 6046.1 4449.4 6801.3 6445.2 4758.2 7124.9 8686.6 7642.2 6591.6 7592.2 8000.3 5956.2 8801.3 9706.4 8605 5183.3 3964.3 5391.5 5968.9 4756.9 6768.1 6400.3 5111.7 7248 8508.6 7805.3 6836 7687.4 8243.9 6307.7 8812.5 9243.2 8179.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163150000 11992 2142 11348 22942 18407 18407 1 9606 Homo sapiens 0.09692620016494402 HLLPVETQR Unmodified 1091.6087 0.60874239 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 7 0 1 38.232 38.296 2 0.0039847 8578 20230619_1887_Aki_TMTPro18x_K_F7 109.36 89.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11993 3881 11349 22943 18408 18408 1 9606 Homo sapiens 0.066602366001689 HLLQGDFPR Unmodified 1081.5669 0.56687757 2525 B4DM26;B4DLE7;Q6UWP7-3;Q6UWP7;B4DYR5 LCLAT1 Lysocardiolipin acyltransferase 1 yes no 0 0 0 7.5 0.5 1 1 42.913 42.955 3 2.6999E-05 10439 20230619_1887_Aki_TMTPro18x_K_F7 156.35 105.74 53136 41775 50218 47538 47347 51052 53301 50330 65630 57727 65878 61927 70450 54621 60874 64034 70621 65424 49099 38304 51194 47607 49581 51358 53784 51676 66141 58093 67743 62451 71271 57107 62620 64271 67439 62144 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155040000 11994 2525 11350 22944;22945 18409;18410 18409 2 9606 Homo sapiens 0.029356809116507065 HLLQGWLR Unmodified 1021.5821 0.58213371 4409 Q9BPX3;Q6NUR1 NCAPG Condensin complex subunit 3 yes no 0 0 0 6 0 1 50.336 50.413 3 0.00062996 14094 20230619_1886_Aki_TMTPro18x_K_F6 130.04 78.973 33894 31061 28164 23469 25246 45444 36433 30966 47484 14500 16671 18973 17103 12559 16533 16511 16162 16043 31321 28376 29043 24646 26926 43930 36384 32198 46393 15750 18591 18849 17416 13379 16801 16504 15467 15244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26061000 11995 4409 11351 22946 18411 18411 1 9606 Homo sapiens 0.07220592499504619 HLLQPPPRPAQPTSGK Unmodified 1722.9529 0.95293723 2685 H0YBK3;B7Z3J7;B7Z970;Q9NV88-3;Q9NV88-2;Q9NV88 INTS9 Integrator complex subunit 9 yes no 0 0 1 4.5 0.5 1 1 38.43 38.498 4 0.00025538 8881 20230619_1885_Aki_TMTPro18x_K_F5 93.51 82.9 28509 22317 26589 26425 31660 33283 29451 33996 36338 31405 38688 33198 38945 32290 31303 39535 41073 39616 26340 20471 27242 26449 32427 33156 30053 34590 36704 31941 39545 33635 39378 33725 32549 39592 39194 37632 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56333000 11996 2685 11352 22947;22948 18412 18412 1 9606 Homo sapiens 0.12037888237250627 HLLSDQTDPFNR Unmodified 1441.695 0.69499121 2509 B4DK32;Q14139;Q14139-2;B7Z7P0 UBE4A Ubiquitin conjugation factor E4 A yes no 0 0 0 5 0 1 45.635 45.712 3 5.5967E-10 11956 20230619_1885_Aki_TMTPro18x_K_F5 155.24 142.88 55165 44399 52626 50157 58525 74707 59888 54729 77654 48598 50686 47096 53345 40706 52133 57320 51406 48424 50985 40703 53758 50504 60476 73201 60823 57129 76943 49480 53370 47706 54282 43088 53022 56823 49171 46099 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46699000 11997 2509 11353 22949 18413 18413 1 9606 Homo sapiens -0.008188483557887594 HLLVHAPEDKK Unmodified 1285.7143 0.71427009 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 1 7.67 0.471 1 2 37.33 37.342 4;5 2.1628E-05 8412 20230619_1888_Aki_TMTPro18x_K_F8 138.71 125.58 360860 262580 325160 340990 301210 498200 326040 360940 633700 520260 559110 864720 937240 815520 515540 1184700 1112600 1757100 333170 241150 333190 339820 317510 488220 336820 382470 625170 528350 595170 860720 925480 863110 568510 1213900 1063200 1660400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 344110000 11998 161 11354 22950;22951;22952 18414;18415;18416;18417 18415 4 9606 Homo sapiens 0.08284152725786953 HLLVSNVGGDGEEIER Unmodified 1722.8537 0.8536767 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 3 0 1 43.996 44.065 3 1.767E-09 11395 20230619_1882_Aki_TMTPro18x_K_F3 117.31 99.499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11999 81 11355 22953 18418 18418 1 9606 Homo sapiens 0.021164007618835967 HLMQDLR Oxidation (M) 927.45964 0.45963531 2639 B4E0B8;Q8TDN6;Q9NUW4;A0JLQ5 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog yes no 0 1 0 4.5 0.5 1 1 30.382 30.453 3 0.052765 5767 20230619_1883_Aki_TMTPro18x_K_F4 51.736 16.487 51780 35804 46465 48225 61611 55809 52499 62527 68250 42154 47353 42788 50511 37075 50364 45378 53733 46983 47792 32903 47861 47787 62497 56028 53960 62830 67736 43746 49681 43259 51418 38903 51369 45575 51332 44632 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37158000 12000 2639 11356 22954;22955 18419 18419 1589 1 9606 Homo sapiens -0.006996122942041438 HLMQDLR Unmodified 911.46472 0.46472069 2639 B4E0B8;Q8TDN6;Q9NUW4;A0JLQ5 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog yes no 0 0 0 6.5 0.5 1 1 37.164 37.23 3 0.011278 8431 20230619_1886_Aki_TMTPro18x_K_F6 90.777 35.99 94113 65258 75301 82784 97662 107960 107540 97887 120780 56497 59321 56156 61389 53000 65977 65684 72592 56674 86797 59930 78456 82479 99991 107000 108170 99609 119630 59439 63855 56991 62856 55429 67365 65308 69281 53983 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58001000 12001 2639 11356 22956;22957 18420 18420 1 9606 Homo sapiens 0.005446915684046871 HLMWDLGK Oxidation (M) 1014.4957 0.49568646 1093 D3DVH1;A0A0S2Z4C9;B4DEL5;Q6IAQ2;A0A0S2Z4B7;Q99643-5;Q99643-3;Q99643 SDHC Succinate dehydrogenase cytochrome b560 subunit, mitochondrial yes no 0 1 0 1 0 1 49.257 49.257 3 0.0059805 14047 20230619_1880_Aki_TMTPro18x_K_F1 82.279 57.987 32268 24700 27876 35268 48038 39332 39387 39938 46454 34316 33575 34495 35741 32192 35381 42890 35433 44757 29792 22703 29015 34783 47980 39503 40412 40606 46400 35010 35162 34955 36411 33846 36034 43006 33966 42457 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25257000 12002 1093 11357 22958 18421 18421 668 1 9606 Homo sapiens -0.010981551173472326 HLMWDLGK Unmodified 998.50077 0.50077184 1093 D3DVH1;A0A0S2Z4C9;B4DEL5;Q6IAQ2;A0A0S2Z4B7;Q99643-5;Q99643-3;Q99643 SDHC Succinate dehydrogenase cytochrome b560 subunit, mitochondrial yes no 0 0 0 2 0 1 52.836 52.869 3 0.001462 15698 20230619_1881_Aki_TMTPro18x_K_F2 114.28 67.618 41291 39202 48752 55033 46048 58934 55399 52598 64097 55642 50539 52417 64542 51866 56785 63777 58943 68005 38276 35998 48917 54301 48344 59118 55575 54269 64268 56004 53123 53351 65045 54180 58038 64112 56438 64514 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28723000 12003 1093 11357 22959 18422 18422 1 9606 Homo sapiens 0.0014614874526159838 HLNALGK Unmodified 751.43407 0.43407249 3274 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 yes yes 0 0 0 2 0 1 38.307 38.37 3 0.059258 9074 20230619_1881_Aki_TMTPro18x_K_F2 56.011 29.409 60980 40208 71552 67713 79005 88787 85458 75953 96190 68969 86055 87465 92530 78047 78886 55348 110360 89579 56399 37059 71907 66361 81631 87836 86095 78321 96877 70709 89056 87582 93610 79667 82043 57991 105150 84796 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24961000 12004 3274 11358 22960 18423 18423 1 9606 Homo sapiens 0.048412812456604115 HLNDETTSK Unmodified 1043.4884 0.48835248 572 Q9NUQ9;A0A024R9G4;A0A8V8TMP7;Q68D08;Q9NUQ9-2 FAM49B;DKFZp686B04128 Protein FAM49B yes no 0 0 0 3 0 1 32.166 32.244 3 0.0013812 6470 20230619_1882_Aki_TMTPro18x_K_F3 94.409 84.876 26406 9885.5 34613 43949 57430 44913 34042 42030 30510 24825 45001 48039 26066 30330 41442 16604 46742 39023 24397 9347.1 34844 41505 57039 45251 35619 42685 31827 26699 44707 47081 27989 31121 42019 18248 44618 36855 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33502000 12005 572 11359 22961 18424 18424 1 9606 Homo sapiens -0.03165216184106612 HLNEIDLFHCIDPNDSK Unmodified 2065.9527 0.95273882 647 A0A024RB32;Q15185-4;Q15185;A0A087WYT3;B3KUY2;Q15185-3 PTGES3 Prostaglandin E synthase 3 yes no 0 0 0 4.75 1.09 1 2 1 55.41 55.472 3;4 2.1101E-38 16161 20230619_1886_Aki_TMTPro18x_K_F6 259.14 244.88 555530 435700 539420 565020 482390 536690 407130 374650 595300 678680 606100 582870 712800 559720 511630 795720 608590 621300 513420 400010 548400 559430 504060 541280 421020 402390 597080 666910 625540 595450 714270 590650 530750 785230 581450 591920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4493100000 12006 647 11360 22962;22963;22964;22965 18425;18426;18427 18427 3 9606 Homo sapiens -0.037599443355247786 HLNLGMNR Oxidation (M) 969.48143 0.48143338 2182 B0YJ73;Q15404;Q32Q10;Q15404-2 RSU1 Ras suppressor protein 1 yes no 0 1 0 1.5 0.5 1 1 31.779 31.811 3 0.02639 6739 20230619_1880_Aki_TMTPro18x_K_F1 60.895 28.003 24029 14471 19570 21032 33187 35528 32228 29991 42749 9674.4 14987 12520 12970 13574 19312 9089.6 22445 13422 22148 13318 20470 20878 33387 34684 32828 30474 41728 11026 16592 12641 13641 13724 19637 9485 21383 12735 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19540000 12007 2182 11361 22966;22967 18428 18428 1353 1 9606 Homo sapiens -0.004528075456391889 HLNPDTELKR Unmodified 1221.6466 0.64658446 3072 H3BQ53;Q9BQ70;Q9H7D3;H3BSP8;H3BSS3 TCF25 Transcription factor 25 yes no 0 0 1 6 0 1 35.672 35.733 4 0.059664 7875 20230619_1886_Aki_TMTPro18x_K_F6 47.971 17.403 65779 52513 70420 68970 79885 68405 77170 65378 74195 102620 126760 100390 109720 87132 115180 93234 114610 106750 60851 48215 71257 68297 81959 69208 77908 68032 77917 101600 126670 101620 112690 90700 116860 94429 109610 101280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52854000 12008 3072 11362 22968 18429 18429 1 9606 Homo sapiens 0.04462702794967299 HLNQEVAVR Unmodified 1064.5727 0.57269123 2709 B7ZL88;Q8N8Q8 COX18 Mitochondrial inner membrane protein COX18 yes no 0 0 0 4.5 0.5 1 1 32.106 32.176 3 4.233E-05 6480 20230619_1885_Aki_TMTPro18x_K_F5 130.75 91.443 14504 12155 13764 15004 18021 15344 17901 19229 18262 19279 22856 17794 19503 18986 17083 16187 23863 19294 13407 11151 14111 14929 18340 15591 18073 19369 18767 19431 23050 18184 19916 19395 17780 16493 22735 18310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19591000 12009 2709 11363 22969;22970 18430 18430 1 9606 Homo sapiens 0.042987794233113164 HLNTINIR Unmodified 979.55631 0.55631289 893 B7ZKT9;A0A087X256;Q2M389-2;Q2M389 KIAA1033 WASH complex subunit 7 yes no 0 0 0 2 0 1 36.671 36.729 3 0.00068356 8394 20230619_1881_Aki_TMTPro18x_K_F2 127.02 76.318 33429 21992 33780 34875 39063 37677 35890 40981 49189 30510 38099 35277 37343 37874 33865 31205 43753 36807 30876 20253 34362 34189 40051 37956 36791 41346 48849 31580 39553 35702 38028 38608 35024 31798 41719 34926 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29677000 12010 893 11364 22971 18431 18431 1 9606 Homo sapiens 0.06571698257221215 HLPDGNICR Unmodified 1080.5135 0.51346179 70 A0A024QZY0;Q86WA6-2;Q86WA6 BPHL Valacyclovir hydrolase yes no 0 0 0 5.5 0.5 1 1 34.867 34.938 3 3.0467E-05 7513 20230619_1885_Aki_TMTPro18x_K_F5 135.83 110.91 123940 81960 116240 131700 151980 159970 155810 160720 156160 118800 147390 148960 142630 123580 135520 139530 180490 166840 114410 75492 119360 129210 155050 159560 156870 163000 158580 123260 151460 149060 145460 129170 140430 141470 172170 158230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87653000 12011 70 11365 22972;22973 18432;18433 18432 2 9606 Homo sapiens -0.0235743986252146 HLPDNECIEK Unmodified 1253.571 0.57103625 3650 P54136;P54136-2 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 40.742 40.808 3 8.7158E-06 9911 20230619_1882_Aki_TMTPro18x_K_F3 133.42 127.58 217350 164750 179540 207060 216010 236760 230830 226810 273700 244010 252340 242170 274040 231280 242430 298340 288590 261930 200600 151230 186250 205990 222010 236930 233150 232850 275520 245720 260770 245720 277540 242440 249920 296530 275490 249260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 636550000 12012 3650 11366 22974;22975 18434;18435 18435 2 9606 Homo sapiens -0.04560642447631835 HLPEPVAIK Unmodified 1002.5862 0.58621603 3315 O75691;B4DN27 UTP20 Small subunit processome component 20 homolog yes no 0 0 0 7.5 0.5 1 1 45.439 45.525 3 0.00011357 11719 20230619_1888_Aki_TMTPro18x_K_F8 117.89 72.522 42375 35086 43055 41346 50381 52361 50811 47346 67624 47511 53371 53217 56073 43951 47261 62321 53611 55309 39191 32174 43779 41396 51761 52010 51704 48725 67307 48228 55534 53488 56711 46614 48650 61893 51245 52601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59053000 12013 3315 11367 22976;22977 18436;18437 18437 2 9606 Homo sapiens 0.08502637202570895 HLPGAFFLGAER Unmodified 1313.6881 0.68805534 4595 Q9NUD5;Q9NUD5-2 ZCCHC3 Zinc finger CCHC domain-containing protein 3 yes no 0 0 0 2 0 1 53.339 53.369 3 0.00017724 15943 20230619_1881_Aki_TMTPro18x_K_F2 100.93 67.056 18015 15449 16691 19338 16117 20888 18342 23056 24853 18469 17170 17703 23276 15859 21343 18997 21415 23028 16653 14174 17076 19231 16885 21043 18574 23266 24634 18895 18251 17947 23446 16614 21727 19272 20500 21824 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31493000 12014 4595 11368 22978 18438 18438 1 9606 Homo sapiens 0.04375883554303073 HLPGVCK Unmodified 809.42179 0.42179324 1871 A0A994J4Y8;Q96HS1-2;Q96HS1;F5GXG4 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 0 0 0 1.5 0.5 1 1 38.939 38.973 3 0.018363 9348 20230619_1881_Aki_TMTPro18x_K_F2 79.454 57.368 342370 286880 357870 365730 466150 449760 465570 474180 589650 347070 367800 305130 312130 266680 371360 309270 407110 293620 316750 263270 363900 364030 475200 449060 473050 479180 584030 356710 385060 310650 323320 278630 378160 309480 388390 279460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155780000 12015 1871 11369 22979;22980 18439;18440 18439 2 9606 Homo sapiens 0.00945921510970038 HLPNDPMFK Oxidation (M) 1113.5277 0.52771487 651 O75390;A0A024RB75;B4DJV2;B3KTN4;A0A0C4DGI3;H0YIC4;Q0QEL2 CS Citrate synthase, mitochondrial;Citrate synthase yes no 0 1 0 7 0.816 1 1 1 42.454 42.512 3 0.0010736 10280 20230619_1887_Aki_TMTPro18x_K_F7 94.309 81.542 213070 179790 211270 231330 293090 276090 280260 292640 257810 276750 303760 257910 325740 267930 307600 320290 309510 308970 197040 165000 216080 229970 297120 276250 282680 297270 265920 279900 310210 263340 330790 278880 313280 320370 296120 293590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 643010000 12016 651 11370 22981;22982;22983 18441 18441 391 1 9606 Homo sapiens -0.0245078743423619 HLPNDPMFK Unmodified 1097.5328 0.53280025 651 O75390;A0A024RB75;B4DJV2;B3KTN4;A0A0C4DGI3;H0YIC4;Q0QEL2 CS Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 7.5 0.5 1 1 46.414 46.502 3 0.00011972 12103 20230619_1888_Aki_TMTPro18x_K_F8 105.4 83.31 505350 403980 492250 520310 509710 646140 534500 567020 630580 650280 667780 606640 692960 584410 591200 754100 677570 727610 467120 370830 501660 517450 529540 641740 540680 586740 638680 651490 683980 617530 701610 612610 608660 753090 647810 691180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 381720000 12017 651 11370 22984;22985 18442;18443;18444 18444 3 9606 Homo sapiens -0.012064835716046218 HLQAAVDR Unmodified 908.48281 0.48281359 4271 Q8TD16;Q8TD16-2 BICD2 Protein bicaudal D homolog 2 yes no 0 0 0 4.5 0.5 1 1 29.546 29.618 3 0.046632 5412 20230619_1883_Aki_TMTPro18x_K_F4 54.722 10.373 22372 17161 25326 20852 23089 25215 28240 23806 29208 31476 33624 33171 40096 32751 29023 35436 44783 42380 20702 15746 25423 20826 24282 25138 28204 24631 29891 31456 34560 33586 40195 33959 30609 35935 42679 40188 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22587000 12018 4271 11371 22986;22987 18445 18445 1 9606 Homo sapiens 0.024911498147503153 HLQDLSGR Unmodified 924.47773 0.47772821 2239 B2R6S9;P30533;A8K8F6 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes no 0 0 0 4.5 0.5 1 1 32.985 33.055 3 4.7464E-05 6796 20230619_1885_Aki_TMTPro18x_K_F5 151.5 91.018 45311 31094 40699 40459 53141 50085 49804 50826 66059 50431 59463 66392 61153 53382 53996 61202 78091 67964 41820 28564 41903 40222 54094 49948 50903 51855 66064 51499 61431 66224 62062 55898 56395 61736 74414 64518 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54949000 12019 2239 11372 22988;22989 18446 18446 1 9606 Homo sapiens 0.012468459521414843 HLQEAEQTK Unmodified 1082.5356 0.53563702 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 3 0 1 32.837 32.909 3 1.3298E-08 6725 20230619_1882_Aki_TMTPro18x_K_F3 200.09 165.91 34875 19084 44670 38913 64986 66408 43302 53958 52758 35367 58947 64137 39059 44588 57731 20010 60929 55319 32256 17656 44818 37995 65261 64745 45258 55447 53375 37634 59380 63077 41458 45318 58336 22611 58227 52189 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63248000 12020 4386 11373 22990 18447 18447 1 9606 Homo sapiens -0.0023293691310755094 HLQINQTFEELR Unmodified 1526.7841 0.78414057 1823 A0A8V8TP16;P51692;A0A8V8TM91;A0A8V8TMR0;A0A8V8TP21;A0A8V8TP00;A0A8V8TM84;Q59H39;A0A8V8TMP4;P42229;A0A384N5W4;A8K6I5;A0A7I2YQY3;Q8WWS9;K7EK35;A0A7I2V380;Q59GY7;Q8WW55;A0A7I2YQF1;K7EIF9;P42229-2;C9J4I3 STAT5B;STAT5A Signal transducer and activator of transcription 5B;Signal transducer and activator of transcription;Signal transducer and activator of transcription 5A yes no 0 0 0 6 0 1 48.701 48.78 3 2.0139E-05 13372 20230619_1886_Aki_TMTPro18x_K_F6 124.06 64.815 68994 60956 73506 73791 71193 85349 92225 80676 103380 138150 180620 231960 150620 154110 176870 143020 148830 233730 63863 55900 74287 73631 74734 85321 92139 84347 107780 139280 180760 228280 156010 160890 177690 149080 143260 220720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218670000 12021 1823 11374 22991 18448 18448 1 9606 Homo sapiens 0.04181986603771293 HLQISQEIGDR Unmodified 1294.663 0.6629628 933 A0A0A0MRC4;Q86YR5;A0A0A0MSK4;Q86YR5-4;Q86YR5-3;A0A087WVF5 GPSM1 G-protein-signaling modulator 1 yes no 0 0 0 3.5 0.5 1 1 39.759 39.808 3 0.00011291 9538 20230619_1882_Aki_TMTPro18x_K_F3 99.752 59.163 51499 42989 47700 51907 61445 65654 62035 61847 83278 53924 68934 71859 70128 59977 59686 61081 73891 69669 47597 39430 49006 51868 62777 65262 63143 63235 82950 55528 71457 71735 71058 62315 61663 61849 70532 66096 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 121090000 12022 933 11375 22992;22993 18449;18450 18449 2 9606 Homo sapiens 0.02741783961096189 HLQLAIR Unmodified 849.51847 0.51847082 3459;74;3424 P16104;Q96QV6;Q9BTM1-2;B2R5B6;A0A3B3IS11;Q99878;A4FTV9;A0A0U1RR32;A0A024R017;Q08AJ9;B2R5B3;A0A024RAS2;A3KPC7;A0A0U1RRH7;Q16777;P04908;Q9BTM1;P20671;P0C0S8;Q6FI13;Q7L7L0;Q93077;Q96KK5;B4E0B3;H0YFX9;Q71UI9;P0C0S5;C9J0D1;A0A494C189;Q71UI9-3;Q71UI9-4;Q71UI9-2;C9J386 H2AFX;HIST1H2AA;H2AFJ;HIST1H2AJ;HIST1H2AK;HIST1H2AC;HIST1H2AB;HIST1H2AH;HIST2H2AC;HIST1H2AD;HIST1H2AG;HIST2H2AA3;HIST3H2A;H2AFV;H2AFZ Histone H2AX;Histone H2A type 1-A;Histone H2A.J;Histone H2A;Histone H2A type 1-J;Histone H2A type 2-C;Histone H2A type 1-B/E;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 2-A;Histone H2A type 3;Histone H2A type 1-C;Histone H2A type 1-H;Histone H2A.V;Histone H2A.Z no no 0 0 0 5 2 1 1 1 1 1 1 1 39.389 39.446 2 0.006298 9275 20230619_1885_Aki_TMTPro18x_K_F5 134.12 62.544 5074800 4405500 4288200 4098600 4645400 5742800 5146000 5011100 6388300 1466300 1500700 1142600 1215600 1092900 2830700 1543700 1736900 1061300 4688300 4031000 4426700 4189700 4819100 5665800 5193800 5074900 6225900 1672000 1758500 1178000 1328700 1152000 2782200 1521400 1667700 1015600 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9187800000 12023 3459;74;3424 11376 22994;22995;22996;22997;22998;22999;23000 18451;18452;18453;18454;18455;18456;18457;18458 18455 8 9606 Homo sapiens 0.08769232062434185 HLQLAIRNDEELNK Unmodified 1691.8955 0.89548193 3459;74 P16104;Q96QV6;Q9BTM1-2;B2R5B6;A0A3B3IS11;Q99878;A4FTV9;A0A0U1RR32;A0A024R017;Q08AJ9;B2R5B3;A0A024RAS2;A3KPC7;A0A0U1RRH7;Q16777;P04908;Q9BTM1;P20671;P0C0S8;Q6FI13;Q7L7L0;Q93077;Q96KK5;B4E0B3;H0YFX9 H2AFX;HIST1H2AA;H2AFJ;HIST1H2AJ;HIST1H2AK;HIST1H2AC;HIST1H2AB;HIST1H2AH;HIST2H2AC;HIST1H2AD;HIST1H2AG;HIST2H2AA3;HIST3H2A Histone H2AX;Histone H2A type 1-A;Histone H2A.J;Histone H2A;Histone H2A type 1-J;Histone H2A type 2-C;Histone H2A type 1-B/E;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 2-A;Histone H2A type 3;Histone H2A type 1-C;Histone H2A type 1-H no no 0 0 1 6 0.707 1 2 1 44.22 44.305 3;4 2.5192E-13 11349 20230619_1886_Aki_TMTPro18x_K_F6 170.42 132.23 116190 133380 120870 91126 137400 110650 106850 113860 115680 107430 114430 103500 112520 85219 109370 129460 139870 107910 107740 121700 122380 96023 140260 110770 109880 115870 117340 108790 117320 104750 114720 90866 113050 128120 133310 102840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1544199999.9999998 12024 3459;74 11377 23001;23002;23003;23004 18459;18460 18460 2 9606 Homo sapiens 0.07721001241043268 HLQNLFVPR Unmodified 1122.6298 0.62981218 4197 Q86X10-4;Q86X10-3;Q86X10;B4E2E8;G1UI28 RALGAPB Ral GTPase-activating protein subunit beta yes no 0 0 0 5 0 1 45.984 46.061 3 0.00043689 12086 20230619_1885_Aki_TMTPro18x_K_F5 99.139 49.325 16123 16288 15377 20561 22482 21842 18986 24213 25513 20429 26315 24695 27443 25101 29474 25634 29181 30021 14925 14937 15816 20425 22686 22049 19557 24457 25636 20987 27006 24910 28080 25904 29898 26011 27928 28465 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27486000 12025 4197 11378 23005 18461 18461 1 9606 Homo sapiens 0.07340246699709496 HLQQELER Unmodified 1051.5411 0.54105675 1138 A0A0S2Z5N0;Q7L4P6-2;Q7L4P6 BEND5 BEN domain-containing protein 5 yes no 0 0 0 2 0 1 33.427 33.485 3 0.0077475 7064 20230619_1881_Aki_TMTPro18x_K_F2 76.679 29.481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12026 1138 11379 23006 18462 18462 1 9606 Homo sapiens 0.017347866693853575 HLQVIFGHLAASR Unmodified 1447.8048 0.80481643 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;A0A994J766;Q6P468;A0A994J588;A0A994J4T8 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 0 6.5 0.5 1 1 46.984 47.07 4 0.006789 12636 20230619_1886_Aki_TMTPro18x_K_F6 70.68 53.459 58978 48859 67071 54843 71008 82512 72592 62470 103370 40415 42384 45103 41809 32517 55170 46116 46368 44377 54601 44785 67453 55283 73553 80870 73987 64634 100930 42316 46376 45170 43329 34683 55328 46056 44435 42175 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39456000 12027 1867 11380 23007;23008 18463;18464 18463 2 9606 Homo sapiens 0.09882621774113431 HLREEEEEGEK Unmodified 1383.6266 0.62663688 3133 J3KR35;Q8WUD4;S4R331;C9JUN5;B4DID2;B4DZZ9 CCDC12 Coiled-coil domain-containing protein 12 yes no 0 0 1 2 0 1 30.709 30.775 4 0.028501 5989 20230619_1881_Aki_TMTPro18x_K_F2 66.56 58.047 32115 17775 35319 33388 36550 39126 35459 32854 45333 34095 47566 42188 46851 34576 33216 30208 47933 41912 29660 16423 35614 32486 37835 38963 36128 34046 45657 34666 48604 42208 47161 35725 34806 31096 45678 39706 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25226000 12028 3133 11381 23009 18465 18465 1 9606 Homo sapiens -0.04983137726298992 HLSVNDLPVGR Unmodified 1205.6517 0.65166983 1441 A0A384MTR2;P30048-2;P30048;Q53HC2 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes no 0 0 0 7.5 0.5 1 1 43.855 43.906 3 4.0809E-07 11061 20230619_1888_Aki_TMTPro18x_K_F8 130.09 104.47 50203 36446 44422 49883 58766 54979 60737 56261 67587 57027 61324 70205 67603 59491 56313 69463 67518 58582 46344 33491 45850 49328 59894 55253 61308 57426 68198 58009 63543 70296 68287 62204 58149 69009 64430 55790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35625000 12029 1441 11382 23010;23011 18466 18466 1 9606 Homo sapiens 0.057070066575988676 HLTDAYFK Unmodified 993.49198 0.4919813 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B4DRX3 RPL6 60S ribosomal protein L6 yes no 0 0 0 7.5 0.5 1 1 45.583 45.646 3 0.0016415 11742 20230619_1888_Aki_TMTPro18x_K_F8 112.41 79.29 198660 170350 225410 245880 247120 275720 250630 256830 242090 251250 243790 260130 263320 178370 212210 260300 265360 280310 183960 156530 227210 242390 254930 276020 252320 263540 247350 254370 250990 260860 265430 191270 219890 261210 253480 265980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 202890000 12030 680 11383 23012;23013 18467;18468 18468 2 9606 Homo sapiens -0.005025016195759235 HLTGEFEK Unmodified 959.47125 0.47124585 2668 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6 RAN GTP-binding nuclear protein Ran yes no 0 0 0 5 0 1 40.865 40.953 3 1.0218E-05 9915 20230619_1885_Aki_TMTPro18x_K_F5 137.14 106.45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12031 2668 11384 23014 18469 18469 1 9606 Homo sapiens -0.010110919992371237 HLTYENVER Unmodified 1159.5622 0.56218613 369;3946 H3BSC1;A0A024R5Z8;P62491;H3BMH2;P62491-2;Q15907-2;B4DMN1;Q15907 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B no no 0 0 0 3 0 1 34.753 34.813 3 4.0627E-05 7506 20230619_1882_Aki_TMTPro18x_K_F3 148.5 129.75 37660 32918 33948 38061 39759 55718 41346 45571 47021 47331 45532 60290 53611 37623 48010 42104 64554 71212 34810 30175 34924 38239 40990 54738 41780 47283 47551 48118 47242 59764 54158 39872 49795 43875 61651 67305 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119850000 12032 369;3946 11385 23015 18470 18470 1 9606 Homo sapiens -0.011212480217636767 HLVAGGGAGAVSR Unmodified 1150.6207 0.62070406 1725 H7C4Z4;A0A804HI56;A0A804HLB0;Q6KCM7-6;Q6KCM7;Q6KCM7-4;Q6KCM7-5;Q6KCM7-2;Q6KCM7-3 SLC25A25 Calcium-binding mitochondrial carrier protein SCaMC-2 yes no 0 0 0 1 0 1 31.54 31.54 3 0.0079481 6632 20230619_1880_Aki_TMTPro18x_K_F1 68.033 45.947 8012.6 8886.8 11369 9246.9 14027 13680 12711 12701 13697 10043 11933 12101 10546 14362 13124 10588 13269 11603 7451.1 8132.5 11296 9375.9 14300 13482 12924 12968 13816 10367 12274 12269 10968 14516 13293 10771 12683 11016 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19483000 12033 1725 11386 23016 18471 18471 1 9606 Homo sapiens 0.051418533433889024 HLVDEPQNLIK Unmodified 1304.7089 0.70885036 2776 CON__P02769 yes yes 0 0 0 5.5 0.957 1 2 2 1 47.678 47.752 3;4 8.5931E-07 12907 20230619_1886_Aki_TMTPro18x_K_F6 138.99 79.565 + 392960 1045900 1363600 516730 3299300 3815000 1744300 1537800 2830700 1070400 961240 1264500 644940 853530 1028500 1034700 1208500 2009000 375900 951340 1328800 609280 3233200 3555600 1879600 1713000 2744300 1118800 1062800 1259900 690040 903810 1049400 1090800 1160000 1894900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5164900000 12034 2776 11387 23017;23018;23019;23020;23021;23022 18472;18473;18474 18474 3 9606 Homo sapiens 0.06868429143332833 HLVEENCEAVPHR Unmodified 1588.7416 0.74162383 420 H3BPZ8;A0A8I5KWG5;A0A8I5KZ92;A0A024R726;A0A8I5KXS9;A0A8I5KRW2;H3BRD3;A0A8I5KPT4;A0A6Q8PFP4;A0A8I5KZ05;A0A024R6Z2;A0A8I5QKZ3;H3BNC0;A0A8I5KQA6;A0A8I5KRV0;A0A8I5KRA7;A0A8I5KPP4;A0A8I5KYD6;Q9NVM4-3;Q9NVM4-4;Q9NVM4 PRMT7 Protein arginine N-methyltransferase 7 yes no 0 0 0 2.5 0.5 1 1 33.102 33.167 4 8.275E-06 6927 20230619_1881_Aki_TMTPro18x_K_F2 104.87 85.808 47034 29841 42414 42451 53670 60400 54550 58561 105300 46430 46788 50346 50149 42661 42645 46879 52712 54838 43395 27450 43646 42063 55005 59645 56453 59595 101870 47825 50901 50666 50759 44495 44075 47476 50352 51994 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 25048000 12035 420 11388 23023;23024 18475;18476 18475 2 9606 Homo sapiens -0.029197317961461522 HLVGLIER Unmodified 935.55525 0.55525025 3038 H0YBI6;H0YBQ0;Q86VQ6 TXNRD3 Thioredoxin reductase 3 yes no 0 0 0 8 0 1 42.678 42.681 3 0.0033814 10562 20230619_1888_Aki_TMTPro18x_K_F8 85.161 52.841 33546 31381 31392 32876 25464 33187 31030 32927 38445 32672 33303 33219 31968 32219 33495 38508 40726 43501 31030 28734 31991 33101 27125 33531 31208 33650 38521 33064 34358 33679 32790 33588 34461 38858 38916 41254 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14841000 12036 3038 11389 23025 18477 18477 1 9606 Homo sapiens 0.08489483888331506 HLVGVCYTEDEAK Unmodified 1519.6977 0.69769333 3411 Q8TBT6;P08574 CYC1 Cytochrome c1, heme protein, mitochondrial yes no 0 0 0 3.5 1.12 1 1 1 1 43.796 43.866 3 2.1425E-16 11182 20230619_1883_Aki_TMTPro18x_K_F4 215.85 206.81 336620 270660 315140 336230 344490 360750 374720 344350 389260 370170 390000 391340 500880 427740 397510 516260 485080 493450 311060 248360 322480 334490 356150 362630 376480 353740 395870 373520 404940 397880 502870 444670 411510 515740 463330 468900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1356900000 12037 3411 11390 23026;23027;23028;23029 18478;18479;18480 18480 3 9606 Homo sapiens -0.04136761013137402 HLVGVDSLIGPETQIGEK Unmodified 1891.0051 0.005091963 4583 Q9NR50;Q9NR50-3;Q9NR50-2;Q9HA31;H0Y580 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes no 0 0 0 6 0 1 56.645 56.717 3 7.6063E-14 16754 20230619_1886_Aki_TMTPro18x_K_F6 156.72 141.13 42079 35747 40312 44071 36457 40402 43189 42682 58399 40343 49564 48856 52793 44302 45476 50476 50686 55750 38905 32792 41062 43780 38384 41189 43625 43404 58204 41195 51395 49083 53433 46181 46688 50906 48481 52877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 571840000 12038 4583 11391 23030 18481 18481 1 9606 Homo sapiens 0.09522962069695495 HLVHQIPR Unmodified 998.57738 0.57738268 4594 Q9NU22 MDN1 Midasin yes yes 0 0 0 2 0 1 29.245 29.317 3 0.02157 5474 20230619_1881_Aki_TMTPro18x_K_F2 65.252 24.265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12039 4594 11392 23031 18482 18482 1 9606 Homo sapiens 0.07803708356755124 HLVLPPTR Unmodified 931.56034 0.56033563 4267 V9HWF3;Q8TCD5;A0A384NYP3;J3KSX6;J3KSY6 HEL74;NT5C 5'(3')-deoxyribonucleotidase, cytosolic type yes no 0 0 0 3 0 1 38.074 38.128 3 0.00071933 8825 20230619_1882_Aki_TMTPro18x_K_F3 110.12 98.747 20758 14939 19609 18923 25110 21697 23909 23020 26498 20297 24173 24261 22749 18025 24449 23387 22076 23589 19171 13717 20087 18825 25569 21775 24252 23355 26734 20783 24856 24246 23332 19085 24695 23432 21156 22397 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35188000 12040 4267 11393 23032 18483 18483 1 9606 Homo sapiens 0.09181787750947024 HLVMGDIPAAVNAFQEAASLLGK Unmodified 2351.2308 0.23075158 3605 P49321;Q53H03;P49321-3;Q6PJY7;P49321-2;Q5T626;O95138;E9PI86;E9PPQ8 NASP Nuclear autoantigenic sperm protein yes no 0 0 0 4.5 0.5 1 1 66 66.027 3 0.005065 20843 20230619_1883_Aki_TMTPro18x_K_F4 61.767 54.07 6052.6 4278.4 6823.2 5679.2 4297.7 6323 5994.6 5766.3 4507.3 6214.7 8602.1 8682.9 6386.8 7029.1 6517.9 6907 7088.3 9308.3 5597.8 3930.6 6823.8 5630.8 4715.1 6327.4 5908.5 5943.8 4838 6326.9 8537.5 8646.1 6603.5 7293.3 6660.4 7076.5 6791.9 8807.5 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11625000 12041 3605 11394 23033;23034 18484 18484 1 9606 Homo sapiens 0.10918543197431063 HLVSPEALDLLDK Unmodified 1448.7875 0.78749461 3067 P19784;H3BNI9;H3BSA1 CSNK2A2 Casein kinase II subunit alpha' yes no 0 0 0 6 0 1 58.476 58.541 3 0.00025339 17507 20230619_1886_Aki_TMTPro18x_K_F6 95.264 73.392 40630 32843 40227 46429 34814 40878 40501 40469 45647 46677 47709 49593 53813 45536 49833 58116 56390 60984 37563 30178 40854 45682 36766 41735 40685 41559 46309 46929 49138 50090 54544 47777 51152 58331 53922 57875 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194150000 12042 3067 11395 23035 18485 18485 1 9606 Homo sapiens 0.08105236657752357 HLVSVCADNNHVR Unmodified 1519.7314 0.73139349 2372 H0Y5P8;B3KP80;B7ZAF7;B4DJX2;Q9Y597-2;Q9Y597 KCTD3 BTB/POZ domain-containing protein KCTD3 yes no 0 0 0 6 0 1 31.837 31.87 4 3.8182E-05 6468 20230619_1886_Aki_TMTPro18x_K_F6 117.21 110.98 14910 12369 15121 14587 15004 15110 15957 17833 19464 18792 17802 21618 17814 15660 18335 16772 22979 20969 13789 11343 15336 14566 15612 15308 16150 18049 19569 19019 18373 21592 18216 16412 18881 17078 21927 19879 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6095400 12043 2372 11396 23036 18486 18486 1 9606 Homo sapiens -0.00768294730710295 HLVYESDK Unmodified 989.48181 0.48181054 3928 V9HW95;Q15293;Q15293-2;Q5J7V8 HEL-S-84;RCN1 Reticulocalbin-1 yes no 0 0 0 4.5 0.5 1 1 38.17 38.238 3 0.00052135 8835 20230619_1883_Aki_TMTPro18x_K_F4 126.41 92.451 51879 37080 43215 64720 95316 98770 94539 81018 101870 72630 89338 96471 88591 75250 73403 83990 106790 96051 47867 34181 45559 63433 94818 96843 95468 83792 102760 74642 92254 96127 89761 78783 76801 84910 101770 91142 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178850000 12044 3928 11397 23037;23038 18487 18487 1 9606 Homo sapiens -0.013351093448022766 HLVYESDQNK Unmodified 1231.5833 0.5833155 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-2;O43852-4;A0A024R755;B3KNG6;O43852-5;O43852-9;O43852-15;H0Y875;B3KQK3 CALU Calumenin yes no 0 0 0 4.2 1.72 1 1 1 1 1 37.535 37.598 3 3.3985E-14 8548 20230619_1883_Aki_TMTPro18x_K_F4 229.17 182.21 121070 91798 111440 104750 142440 134600 133290 128790 159200 158240 189920 191340 193940 153710 164550 193490 194620 175310 111830 84184 114400 105170 145130 133790 135730 132750 161940 159350 193560 191510 196340 161890 169650 192720 185790 166770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1091000000 12045 2386 11398 23039;23040;23041;23042;23043 18488;18489;18490 18489 3 9606 Homo sapiens -0.023212827129100333 HLYHQAFPTPK Unmodified 1337.6881 0.68805534 1121 A0A0S2Z5B4;Q6IAK1;A0A0S2Z5A2;Q53F53;A0A0S2Z5B0;Q8WXF7-2;Q8WXF7 SPG3A;ATL1 Atlastin-1 yes no 0 0 0 3 0 1 39.734 39.79 4 0.016099 9501 20230619_1882_Aki_TMTPro18x_K_F3 67.207 43.602 69089 50740 59787 73276 55453 62626 66862 64068 69542 77842 83893 82593 79024 76090 78828 81422 88077 93706 63772 46652 61524 71975 58275 64152 66857 65761 71288 78060 85189 83406 80858 78966 80688 82421 84221 88851 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27913000 12046 1121 11399 23044 18491;18492 18491 2 9606 Homo sapiens 0.032718835542937086 HLYLAEEER Unmodified 1158.5669 0.56693715 4638 Q9P031;F8VNY5 CCDC59 Thyroid transcription factor 1-associated protein 26 yes no 0 0 0 2 0 1 38.154 38.218 3 0.00023872 8992 20230619_1881_Aki_TMTPro18x_K_F2 121.35 79.033 38963 25806 35956 34262 40211 42840 34660 38996 50000 38390 41339 49150 46528 39293 38143 42855 51145 45183 35962 23715 36820 34020 41309 42579 35758 40075 49703 39181 43089 49046 46939 41040 39672 43131 48768 42912 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91790000 12047 4638 11400 23045 18493 18493 1 9606 Homo sapiens -0.006003638790161858 HLYLTEK Unmodified 902.48617 0.48616764 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2 UBR4 E3 ubiquitin-protein ligase UBR4 no no 0 0 0 7.5 0.5 1 1 41.965 42.001 3 0.0014589 10144 20230619_1887_Aki_TMTPro18x_K_F7 143 35.575 68516 52885 57242 63132 75171 78020 74089 75888 93691 74904 86020 87105 84831 68370 74459 87840 100310 88026 63246 48516 59389 63115 76652 77730 75354 77634 93969 76152 88558 87261 86131 72180 77392 87930 95638 83650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82420000 12048 4061 11401 23046;23047 18494 18494 1 9606 Homo sapiens 0.031023998687601306 HLYQNTR Unmodified 930.46716 0.46716353 4072 Q5UW39;Q9Y2K1-2;Q9Y2K1 ZBTB1 Zinc finger and BTB domain-containing protein 1 yes no 0 0 0 8 0 1 26.845 26.879 3 0.013971 4606 20230619_1888_Aki_TMTPro18x_K_F8 86.472 39.809 11856 7486.7 11553 15646 18011 17103 16824 16640 19970 12428 19086 17857 15620 13598 12286 10248 18764 15393 10945 6924.3 11882 15128 18146 17165 17122 16925 20094 12962 19456 17737 15901 13992 12896 10650 17867 14579 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1794800 12049 4072 11402 23048 18495;18496 18496 2 9606 Homo sapiens -0.0008513670228467163 HLYTLDGGDIINALCFSPNR Unmodified 2275.1056 0.10555106 2907 P63244;E9KL35;J3KPE3;H0Y8W2;D6RAC2;H0YAF8;D6REE5;H0YAM7;D6R9L0;D6R9Z1;H0Y8R5;D6RF23 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 1.5 0.5 1 1 62.371 62.376 3 1.0141E-79 19682 20230619_1881_Aki_TMTPro18x_K_F2 318.41 307.65 150150 118960 138640 155140 108740 120230 152120 143950 148550 162180 151380 156650 184540 157550 147330 183930 167440 181430 138730 109220 141450 153260 116460 124770 150780 145990 151750 162720 156660 159320 185540 163890 151780 184160 160110 172300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274750000 12050 2907 11403 23049;23050 18497 18497 1 9606 Homo sapiens 0.019002510610789614 HMAAASAECQNYAK Oxidation (M) 1566.6555 0.65551094 1989 Q9P2E9;A7BI36;Q9P2E9-3;A1A5C5;A1A5C4;F8W7S5;B3KSG1;A0A087WU26 RRBP1 Ribosome-binding protein 1 yes no 0 1 0 5 0 1 32.691 32.773 3 1.4375E-05 6666 20230619_1885_Aki_TMTPro18x_K_F5 113.61 105.7 11719 5772.5 7804.7 5275.6 8587.7 9001.8 10886 11735 9141 10490 10002 11494 10654 7080.5 9778.1 13133 12112 11427 10779 5295.5 8251.3 5432.5 8919.7 8885.4 10791 11754 9453.5 10685 10263 11475 10800 7774.4 10106 12993 11561 10874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26529000 12051 1989 11404 23051 18498 18498 1254 1 9606 Homo sapiens -0.10515059693148032 HMAAASAECQNYAK Unmodified 1550.6606 0.66059632 1989 Q9P2E9;A7BI36;Q9P2E9-3;A1A5C5;A1A5C4;F8W7S5;B3KSG1;A0A087WU26 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 6 0 1 36.384 36.445 3 4.7142E-09 8130 20230619_1886_Aki_TMTPro18x_K_F6 162.68 157.35 20832 16789 19736 15674 17426 17305 20413 21368 23608 24644 25262 29050 26418 23886 22323 28476 35627 31574 19253 15367 20078 15972 18353 17486 20518 21628 23943 24855 25914 29105 26757 25048 23537 28696 33931 29971 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31103000 12052 1989 11404 23052 18499 18499 1 9606 Homo sapiens -0.09270755830539201 HMDGGQIDGQEITATAVLAPWPRPPPR Oxidation (M) 2925.4556 0.45555957 2826 Q15287;D3DU92;H3BTC0;H3BMM9;H3BV80;Q15287-2;Q15287-3;H3BPG5 RNPS1 RNA-binding protein with serine-rich domain 1 yes no 0 1 1 8 0 1 54.465 54.532 4 4.1194E-29 15393 20230619_1888_Aki_TMTPro18x_K_F8 192.58 184.88 87571 67168 82066 90620 91834 110850 90905 106090 116920 99678 108100 125620 127520 110610 94913 150370 133770 155160 80901 61698 84030 89832 94724 110400 92556 108500 117260 101900 112260 125890 128050 116670 99548 150550 127770 147250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 311370000 12053 2826 11405 23053 18500;18501 18500 1683 2 9606 Homo sapiens 0.06985001209795882 HMDGGQIDGQEITATAVLAPWPRPPPR Unmodified 2909.4606 0.46064495 2826 Q15287;D3DU92;H3BTC0;H3BMM9;H3BV80;Q15287-2;Q15287-3;H3BPG5 RNPS1 RNA-binding protein with serine-rich domain 1 yes no 0 0 1 8 0 1 56.356 56.413 4 1.8986E-72 16243 20230619_1888_Aki_TMTPro18x_K_F8 270.58 260.18 64674 50055 57291 68425 62180 69308 66651 65959 98934 79707 68728 72376 81211 66342 65792 84243 76227 93486 59726 45984 58954 67576 64404 69931 67909 67991 97742 79653 72486 73588 81761 69623 67858 84822 72952 88632 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 410420000 12054 2826 11405 23054 18502;18503 18502 2 9606 Homo sapiens 0.08229305072427451 HMDPPPAPVQDR Oxidation (M) 1374.635 0.63503349 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 1 0 2.67 0.471 1 2 29.512 29.598 3 0.00050075 5507 20230619_1881_Aki_TMTPro18x_K_F2 92.19 76.3 8571.1 5100 5942.2 9157.6 8538.9 7545.9 7653.4 11504 11723 8393 10040 10721 10765 9549.4 12000 10744 9706.9 10397 7891.9 4707.1 6310.3 8887 8640.3 7840.5 7899.3 11387 11634 8719.7 10420 10743 11023 9947.6 12048 10764 9314.4 9876.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187840000 12055 630 11406 23055;23056;23057 18504;18505 18504 365 2 9606 Homo sapiens -0.03729862290674646 HMDPPPAPVQDR Unmodified 1358.6401 0.64011887 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 3.5 0.5 1 1 35.141 35.193 3 0.019413 7525 20230619_1882_Aki_TMTPro18x_K_F3 59.731 46.751 22961 15651 26309 26397 27947 36480 27506 27840 31884 26828 31388 36824 30321 28254 32145 27452 36753 35278 21234 14423 26479 25884 28928 35892 27903 29013 32197 27484 32225 36612 31088 29378 32881 28056 35110 33429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171870000 12056 630 11406 23058;23059 18506 18506 1 9606 Homo sapiens -0.024855584280430776 HMEASLQELK Oxidation (M) 1200.5809 0.58087266 3499 P24593 IGFBP5 Insulin-like growth factor-binding protein 5 yes yes 0 1 0 4 0 1 40.743 40.785 3 0.021336 9913 20230619_1883_Aki_TMTPro18x_K_F4 57.203 42.059 57163 43097 51641 55811 71517 84258 76788 65500 103170 68545 84207 98290 74280 73839 82447 62421 71678 83251 52789 39572 53265 55665 72950 82586 77853 68320 102710 70103 86963 97506 76574 76325 82992 64160 68765 78809 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76878000 12057 3499 11407 23060 18507 18507 2167 1 9606 Homo sapiens -0.011394544422273611 HMEDPLEMER 2 Oxidation (M) 1317.5329 0.53293619 1285 A0A1K0FUB6;Q8WWM9;K7EMC7 CYGB Cytoglobin yes no 0 2 0 1.5 0.5 1 1 32.619 32.649 3 0.00027399 6997 20230619_1880_Aki_TMTPro18x_K_F1 108.9 96.69 24189 20923 27905 23366 23116 18041 29481 27592 23271 29030 25911 19822 33334 17315 19494 37528 24580 23275 22403 19174 27932 23360 24466 18895 29176 27567 24202 28953 26732 20508 33053 19050 20448 36529 23460 22262 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 241850000 12058 1285 11408 23061;23062 18508 18508 810;811 1 9606 Homo sapiens -0.11312896424556129 HMEDPLEMER Oxidation (M) 1301.538 0.53802156 1285 A0A1K0FUB6;Q8WWM9;K7EMC7 CYGB Cytoglobin yes no 0 1 0 1 0 2 37.9 37.9 3 2.654E-05 8856 20230619_1880_Aki_TMTPro18x_K_F1 141.88 136.04 180050 153660 174370 166300 150300 187650 192240 191190 238240 217010 197800 169270 218620 162260 149510 228620 221530 187840 166490 140780 177230 167310 159390 188210 192820 195710 238480 216540 205460 173920 219110 171220 157640 226150 211030 178970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 421730000 12059 1285 11408 23063;23064 18509;18510 18509 810;811 2 9606 Homo sapiens -0.10068592561970036 HMEDPLEMER Unmodified 1285.5431 0.54310694 1285 A0A1K0FUB6;Q8WWM9;K7EMC7 CYGB Cytoglobin yes no 0 0 0 1.5 0.5 1 1 43.047 43.088 3 4.2002E-07 11453 20230619_1880_Aki_TMTPro18x_K_F1 172.56 161.46 109470 87532 106210 84870 83681 101410 104350 109420 149660 113530 89219 83819 133680 86966 69134 143240 115590 91731 101190 80143 107710 86278 89419 101500 105410 111270 147470 113710 96198 86659 131850 92650 74400 139930 109980 87760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 211710000 12060 1285 11408 23065;23066 18511;18512 18511 2 9606 Homo sapiens -0.08824288699338467 HMEIDIIKR Unmodified 1153.6278 0.62776327 252 Q4G0F5;A0A024R3L9 VPS26B Vacuolar protein sorting-associated protein 26B yes no 0 0 1 8 0 1 43.81 43.821 4 0.026439 11036 20230619_1888_Aki_TMTPro18x_K_F8 64.297 45.986 46487 38558 43870 39172 42854 34825 48091 48889 49994 44249 50141 39746 41878 34894 42626 40870 38643 33040 42969 35312 44724 39510 44633 35923 48260 48842 50798 44819 51010 40429 43023 36464 43102 40552 36973 31485 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35200000 12061 252 11409 23067 18513 18513 1 9606 Homo sapiens 0.05709449899586616 HMEPDLSAR Oxidation (M) 1070.4815 0.48149296 3138 J3KTF5;Q9BQ95;K7EN32;Q9BQ95-4;Q9BQ95-2;K7EJG5 ECSIT Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial yes no 0 1 0 2 0 1 29.581 29.65 3 0.034446 5528 20230619_1881_Aki_TMTPro18x_K_F2 49.35 37.125 9661.8 7550.2 10511 13831 17166 16688 16373 15598 13084 11866 16368 15125 12918 12623 14257 9720.1 13518 11993 8938 6962.1 10728 13472 17249 16626 16449 15914 13637 12290 16486 15122 13363 12943 14408 9960.8 12931 11373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9547100 12062 3138 11410 23068 18514 18514 1823 1 9606 Homo sapiens -0.050928523363154454 HMEPQVK Oxidation (M) 883.42219 0.42218717 1145 A0A0S2Z5X1;Q96DA6;A0A8I5KQT8;Q96DA6-2;G5E9V2;F2Z3A7;A0A2R8Y817 DNAJC19 Mitochondrial import inner membrane translocase subunit TIM14 yes no 0 1 0 5 0 1 30.192 30.268 3 0.081113 5778 20230619_1885_Aki_TMTPro18x_K_F5 47.743 29.012 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12063 1145 11411 23069 18515 18515 706 1 9606 Homo sapiens -0.024187035598288276 HMGGILAVANIR Unmodified 1250.6918 0.69176051 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 5 0 1 49.171 49.247 3 5.3106E-06 13430 20230619_1885_Aki_TMTPro18x_K_F5 116.77 98.918 68033 46070 63660 60996 53226 66970 67819 65900 103660 64374 69771 66163 73429 71465 80843 72039 80676 61223 62807 42333 64870 60461 56647 67211 68617 67363 102070 65305 73332 67297 75258 73513 82008 71830 77057 58336 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121310000 12064 3598 11412 23070 18516 18516 1 9606 Homo sapiens 0.07644230056507695 HMGLFDHAAR Oxidation (M) 1169.54 0.5400109 2501 B4DJB4;H0YL72;B4DSY4;Q53GF8;P50213;B7Z9J8;P50213-2;H0YNF5 IDH3A Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 1 0 6.5 0.5 1 1 29.88 29.948 3 0.00080241 5794 20230619_1886_Aki_TMTPro18x_K_F6 93.325 81.111 25343 18014 28343 30256 42879 33091 34524 31778 40132 30502 41733 43854 33712 39235 41756 33043 43328 39396 23438 16597 28755 29567 43047 33238 35460 32539 40590 31323 42422 43746 35117 40245 42355 33700 41414 37366 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 14011000 12065 2501 11413 23071;23072 18517;18518;18519 18518 1531 3 9606 Homo sapiens -0.037977509711936364 HMLADVFSVK Unmodified 1145.5903 0.59031513 268 A0A024R3V8;Q99598 TSNAX Translin-associated protein X yes no 0 0 0 2 0 1 55.113 55.133 3 1.277E-05 16655 20230619_1881_Aki_TMTPro18x_K_F2 147.41 120.62 70644 56477 68524 70264 56113 75351 70192 69235 76508 72355 70836 83694 88760 69187 85888 92618 83773 87327 65297 51825 69624 69896 59756 75635 70175 71256 77373 73307 73841 83949 89841 73096 87308 92382 80198 82987 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48595000 12066 268 11414 23073 18520 18520 1 9606 Homo sapiens 0.023343586339706235 HMLPSGFR Oxidation (M) 959.46472 0.46472069 199 D3YTB1;A0A024R2G7;F8W727;P62910 RPL32 60S ribosomal protein L32 yes no 0 1 0 2 0.816 1 1 1 34.515 34.554 3 0.00058382 7749 20230619_1880_Aki_TMTPro18x_K_F1 122.74 74.999 212330 134550 194920 221640 234180 255650 242500 260480 241670 172370 170050 173930 169610 161290 200790 185130 209250 181040 195930 123990 200220 216990 240330 255880 244000 263350 243240 179040 177980 176160 174780 167970 203990 185500 199930 172100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 261600000 12067 199 11415 23074;23075;23076 18521;18522;18523 18521 125 3 9606 Homo sapiens -0.016633084315913038 HMLPSGFR Unmodified 943.46981 0.46980607 199 D3YTB1;A0A024R2G7;F8W727;P62910 RPL32 60S ribosomal protein L32 yes no 0 0 0 3.5 0.5 1 1 39.469 39.523 3 4.1702E-06 9344 20230619_1883_Aki_TMTPro18x_K_F4 133.6 115.75 64454 55472 71029 67312 60240 91779 82374 70730 73319 48724 33272 32356 46536 36693 43095 48706 46086 41934 59669 50876 71467 67324 64158 90392 81456 73145 73569 49993 36626 33767 46918 38365 44075 48357 44037 39916 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212250000 12068 199 11415 23077;23078 18524;18525 18525 2 9606 Homo sapiens -0.0041900456898247285 HMLPSGFRK Unmodified 1071.5648 0.56476908 199 D3YTB1;A0A024R2G7;F8W727;P62910 RPL32 60S ribosomal protein L32 yes no 0 0 1 6 0 1 39.374 39.462 4 0.019975 9304 20230619_1886_Aki_TMTPro18x_K_F6 57.59 42.018 147380 178220 162690 141120 162320 149860 152410 163690 139170 99668 101660 69387 85661 72060 101130 94618 96025 66257 136800 162730 163800 145960 168030 151450 153950 164520 140950 103260 105210 72097 88678 75425 102240 93172 91719 63341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55177000 12069 199 11416 23079 18526 18526 1 9606 Homo sapiens 0.03184928902192041 HMLPTVLR Oxidation (M) 981.54297 0.54297101 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6;B4E1Q0;E9PH38 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 1 0 2 0 1 37.639 37.699 3 0.024991 8768 20230619_1881_Aki_TMTPro18x_K_F2 60.118 40.756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12070 1860 11417 23080 18527 18527 1185 1 9606 Homo sapiens 0.05146124153634446 HMLPTVLR Unmodified 965.54806 0.54805639 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6;B4E1Q0;E9PH38 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 3.5 0.5 1 1 42.525 42.579 3 3.5823E-05 10631 20230619_1883_Aki_TMTPro18x_K_F4 176.66 143.3 41920 41381 40033 40334 41055 58357 44495 46415 64833 18234 18640 13373 14381 12849 30483 14408 16688 12409 38797 37861 40858 41075 42803 57347 45263 47477 62892 19894 21105 13818 15594 13354 29862 14397 16071 11823 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97499000 12071 1860 11417 23081;23082 18528 18528 1 9606 Homo sapiens 0.06390428016243277 HMMAFIEQEANEK Unmodified 1576.7014 0.7013985 3556 Q53Y06;P36543;P36543-3;A0A140VKA8;Q96A05 ATP6V1E1;ATP6V1E2 V-type proton ATPase subunit E 1;V-type proton ATPase subunit E 2 yes no 0 0 0 5 0.816 1 1 1 54.585 54.638 3 1.5181E-05 16074 20230619_1883_Aki_TMTPro18x_K_F4 119.43 107.07 135220 101360 128680 140480 108840 146870 124330 125540 169400 174720 162950 181770 187660 163500 152150 203380 194330 209550 124910 93138 131050 138680 115350 147450 125900 131070 169860 174200 168660 183530 189130 171370 157950 203930 185640 198910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 496170000 12072 3556 11418 23083;23084;23085 18529;18530 18529 2 9606 Homo sapiens -0.06388414510888651 HMNLILCDCDEFRK Oxidation (M) 1865.8223 0.82225869 2604 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q9UIS4;Q15182;P14678-2;P63162;P14678;P63162-2;P14678-3;J3KRY3;S4R3P3;Q6LBS1 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated proteins B and B';Small nuclear ribonucleoprotein-associated protein N yes no 0 1 1 5.5 1.12 1 1 1 1 45.461 45.535 4 3.6905E-05 11924 20230619_1886_Aki_TMTPro18x_K_F6 113.8 103.7 417530 375990 416970 426410 508490 458860 476700 438470 486680 485960 463770 431900 515620 377010 427920 582760 490120 511570 386320 344560 424920 427060 519170 461490 482770 450720 494670 486940 478940 439420 520080 401840 440990 577810 468490 486570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 803420000 12073 2604 11419 23086;23087;23088;23089 18531;18532 18532 1568 2 9606 Homo sapiens -0.07601954859774196 HMNLILCDCDEFRK Unmodified 1849.8273 0.82734407 2604 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q9UIS4;Q15182;P14678-2;P63162;P14678;P63162-2;P14678-3;J3KRY3;S4R3P3;Q6LBS1 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated proteins B and B';Small nuclear ribonucleoprotein-associated protein N yes no 0 0 1 6.5 0.5 1 1 49.924 50.003 4 1.1163E-06 13539 20230619_1887_Aki_TMTPro18x_K_F7 129.17 118.68 348270 282890 321670 331290 312550 377860 360790 341510 421940 413250 365440 369270 443920 369250 336480 493830 485020 430320 321820 259420 328950 331250 327060 377700 362840 353330 424360 412600 380970 377020 445630 387480 353090 490220 462250 409600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 968490000 12074 2604 11419 23090;23091 18533;18534 18534 2 9606 Homo sapiens -0.06357650997142628 HMPPNLQK Oxidation (M) 979.49094 0.49093544 4422 Q9BRT9;E5RFF9 GINS4 DNA replication complex GINS protein SLD5;DNA replication complex GINS protein SLD5, N-terminally processed;DNA replication complex GINS protein SLD5 yes no 0 1 0 8 0 1 33.997 33.993 3 0.0067493 7102 20230619_1888_Aki_TMTPro18x_K_F8 79.116 45.319 24127 17791 25575 23557 29063 33677 26042 29703 29636 24495 33107 34576 30956 26880 29684 24831 34497 27733 22307 16341 25899 23449 29844 33183 26565 30465 30103 25345 33720 34376 31606 27864 30442 25172 32913 26335 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18633000 12075 4422 11420 23092 18535 18535 2771 1 9606 Homo sapiens 0.0003696073987384807 HMQGIQFR Oxidation (M) 1031.4971 0.49708345 1056 A0A0S2A4E4;A0A0M4G3H8;P35573-2;P35573-3;P35573;G1UI17 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes no 0 1 0 1 0 1 31.674 31.674 3 0.0020824 6648 20230619_1880_Aki_TMTPro18x_K_F1 101.28 68.929 16343 13434 15660 19893 21463 22806 21525 18355 23704 15672 19676 22368 18792 21431 26515 18832 23589 20456 15107 12350 16079 19579 21830 22733 21751 19005 23834 16210 20377 22366 19612 21970 26621 19088 22577 19424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15951000 12076 1056 11421 23093 18536 18536 615 1 9606 Homo sapiens -0.017405210286142392 HMQLYCDR Oxidation (M) 1137.4695 0.46954807 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;B1AHB2 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 1 0 5 1.07 1 1 2 3 28.725 28.791 3 0.0022406 4905 20230619_1883_Aki_TMTPro18x_K_F4 99.139 86.562 42936 35448 41805 34821 52513 52921 53010 53012 59361 29613 39967 34106 29688 35569 45907 29566 35919 28573 39695 32455 42680 35498 53675 52164 53597 53504 59221 31376 41464 34510 31467 36270 45751 29818 34413 27177 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 106660000 12077 2188 11422 23094;23095;23096;23097;23098;23099;23100 18537;18538;18539;18540;18541 18538 1363 5 9606 Homo sapiens -0.09368792351165212 HMQNSEIIR Oxidation (M) 1142.5502 0.55024123 1775 A0A8I5KVF8;Q6MZM4;Q6MZP3;Q8N3U4;Q8N3U4-2;B2R8Y6;Q6AI02;Q6MZM3;B1AMT4;A0A8I5KUG8;B1AMT1;B1AMT2;B1AMT3 DKFZp686P16143;DKFZp686I05169;STAG2;DKFZp686P168;DKFZp686C21148 Cohesin subunit SA-2 yes no 0 1 0 6 1.41 2 1 27.54 27.591 3 0.007507 5060 20230619_1885_Aki_TMTPro18x_K_F5 75.378 44.305 9538.6 8313.3 9782.5 9296.3 12746 13735 10669 11642 12716 10328 14272 13540 15152 15900 12898 10766 19075 15814 8825.5 7618.4 9957.5 9368.3 12948 13506 10947 11998 12891 10617 14601 13682 15355 16045 13481 11194 18169 14979 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9531900 12078 1775 11423 23101;23102;23103 18542;18543;18544 18543 1148 3 9606 Homo sapiens -0.015331880366147743 HMVGPDWR Oxidation (M) 1012.4549 0.45488428 4532 Q9H857-4;Q9H857;Q9H857-3;Q9H857-2;H7C4G8 NT5DC2 5'-nucleotidase domain-containing protein 2 yes no 0 1 0 5.5 0.5 1 1 33.605 33.668 3 0.029322 7042 20230619_1885_Aki_TMTPro18x_K_F5 58.981 41.133 18482 13841 19362 20930 19968 21205 20915 21972 33148 18471 27686 22342 17665 18214 23166 18606 26243 21345 17087 12732 19613 20551 20733 21433 21409 22303 32781 19002 28189 22388 18637 18932 23603 18862 25045 20263 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22120000 12079 4532 11424 23104;23105 18545 18545 2805 1 9606 Homo sapiens -0.050844964369730405 HMYHSLYLK Oxidation (M) 1206.5856 0.5855641 1679 J3QR09;J3KTE4;Q53G49;A0A7I2YQG2;P84098;Q8IWR8 RPL19 Ribosomal protein L19;60S ribosomal protein L19 yes no 0 1 0 2.5 0.5 1 1 37.797 37.855 4 0.0016122 8838 20230619_1881_Aki_TMTPro18x_K_F2 100.15 83.517 406950 358490 398400 354980 483450 531050 458300 462040 576070 110060 117500 102230 93281 78477 234000 80453 85577 63243 376410 328170 406440 361380 494930 522130 466880 467270 560410 130750 141280 103640 102740 81817 226420 80380 83160 60333 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 588540000 12080 1679 11425 23106;23107 18546;18547 18546 1096 2 9606 Homo sapiens -0.009465255088343838 HNAAFCYK Unmodified 1009.444 0.44398525 3775 V9HW89;Q00796;A0A6I8PIS1;B4DKI2 HEL-S-95n;SORD Sorbitol dehydrogenase yes no 0 0 0 1.5 0.5 1 1 37.763 37.794 3 0.0094319 8835 20230619_1881_Aki_TMTPro18x_K_F2 69.825 40.477 85686 71004 78644 75916 130760 150220 102190 101040 147560 45124 58922 46587 58440 44833 77621 43918 64180 50020 79184 65054 81250 77226 131090 145110 105990 105070 143910 48907 64559 47264 60570 46292 77654 44604 61439 47496 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 262060000 12081 3775 11426 23108;23109 18548 18548 1 9606 Homo sapiens -0.06035898811262541 HNALIQEVISQSR Unmodified 1493.795 0.79503961 964 Q13617-2;Q13617;A0A0A0MTN0;A0A8I5QJI3;A0A8I5KYP8;A0A140VKB1;A0A8I5KUA9;A0A8I5KQQ5;Q5T2B5;A0A8I5KU22;A0A8I5KVR3;A0A8I5KYZ8 CUL2 Cullin-2 yes no 0 0 0 8 0 1 48.299 48.365 3 3.1506E-06 12872 20230619_1888_Aki_TMTPro18x_K_F8 133.47 85.911 127250 79581 112800 114290 95768 121860 110180 112980 149750 115820 125180 136630 159090 133520 122020 172570 157870 177090 117380 73219 115550 112640 101450 122370 111510 116140 149250 117630 131110 137740 159570 139910 126990 172880 150840 168080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85558000 12082 964 11427 23110 18549;18550 18550 2 9606 Homo sapiens 0.06789388978040733 HNAVIEHLK Unmodified 1059.5825 0.58252764 1361 E7ETD6;E9PE19;A0A2R8Y7Q1;J3QQK4;Q12830-4;Q12830-2;Q12830;J3KSK9;B4DJV8;Q9H5E0 BPTF Nucleosome-remodeling factor subunit BPTF yes no 0 0 0 7 0 1 36.345 36.413 4 0.00015893 7861 20230619_1887_Aki_TMTPro18x_K_F7 137.98 98.672 51517 43397 58944 55393 63040 65188 66593 56826 76587 70664 74589 76252 83310 72449 63926 78111 91079 83730 47702 39825 59299 55088 65201 64997 67231 59029 77378 70880 76995 77020 83868 75159 66915 78681 86830 79495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35703000 12083 1361 11428 23111 18551 18551 1 9606 Homo sapiens 0.05511967428697062 HNDDEQYAWESSAGGSFTVR Unmodified 2254.9516 0.95155284 751;3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;Q14568;A0A024RD80;P08238;B4DGL0;Q6PK50 EL52;HSP90AA1;HSP90AA2P;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta no no 0 0 0 2.91 1.23 1 13 12 3 1 1 1 68.545 68.6 3 4.3375E-37 13492 20230619_1882_Aki_TMTPro18x_K_F3 236.43 223.01 245950 190930 234390 243370 212500 222470 213260 192530 277440 316130 287740 283040 313590 277140 252760 343170 303590 292970 227240 175170 238580 241050 222050 225740 216890 201690 279560 311720 295750 288440 316150 289480 261270 340650 289900 278790 24 20 25 27 23 27 25 25 27 27 28 27 25 30 27 28 28 26 7521699999.999999 12084 3177;751 11429 23112;23113;23114;23115;23116;23117;23118;23119;23120;23121;23122;23123;23124;23125;23126;23127;23128;23129;23130;23131;23132;23133;23134;23135;23136;23137;23138;23139;23140;23141;23142;23143 18552;18553;18554;18555;18556;18557;18558;18559;18560;18561;18562;18563;18564;18565;18566;18567;18568;18569;18570;18571;18572;18573;18574;18575;18576;18577;18578;18579;18580;18581;18582;18583;18584 18567 33 9606 Homo sapiens -0.12572487170746172 HNDLDDVGK Unmodified 1011.4621 0.46213773 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62;A0A6Q8PGI8 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 37.374 37.431 3 0.00013283 8651 20230619_1881_Aki_TMTPro18x_K_F2 124.1 92.169 131550 72367 123550 133700 132340 150370 127990 134350 246750 172330 227550 367550 288440 283090 180350 185600 375630 376880 121330 66848 126350 130080 136960 150320 132950 139480 243620 178240 237790 360700 287790 289610 196060 198800 357520 355930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 270540000 12085 1637 11430 23144;23145 18585;18586 18585 2 9606 Homo sapiens -0.04313485355555713 HNDMADLER Oxidation (M) 1115.4666 0.46657118 191 A0A024R277;A0A8I5QKQ8;A0A8I5KUM4;Q6NUL7;O15269;Q59EQ4 SPTLC1 Serine palmitoyltransferase 1 yes no 0 1 0 1 0 1 26.611 26.611 3 0.0035228 4687 20230619_1880_Aki_TMTPro18x_K_F1 73.885 56.449 4795.2 5418.5 3895.5 2362 4510.1 4716.5 4234.6 3853.5 4954.6 5124.5 4495.8 4256.9 5916.6 4178 3856.5 2522.3 7124.2 4142.5 4437.6 4933.9 4031.3 2680.7 4630 4581.7 4307.5 4027 4994 5086.1 4692.5 4351 5892.9 4233 4128.4 2657.5 6764.1 3928.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17095000 12086 191 11431 23146 18587 18587 121 1 9606 Homo sapiens -0.08654344204319386 HNDVVPTMAQGVLEYK Unmodified 1799.8876 0.88761936 2838 D6RGV8;D6RHG2;D6RJH7;D6R983;D6RDN9;Q15119-2;Q15119 PDK2 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial yes no 0 0 0 7 0 1 53.073 53.143 3 5.2483E-06 14988 20230619_1887_Aki_TMTPro18x_K_F7 111.78 0 30442 28699 30326 28439 19281 25203 26793 26051 30618 34927 35026 28971 36851 29354 30729 36488 37708 37699 28175 26265 30640 28728 21137 25763 26720 26799 31167 34639 35762 29717 37251 30665 31771 36602 36011 35794 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45622000 12087 2838 11432 23147 18588 18588 1 9606 Homo sapiens 0.01967105929270474 HNEETGDNVGPLIIK Unmodified 1634.8264 0.82639932 53 A0A024QZN7;Q9NZ45 C10orf70;CISD1 CDGSH iron-sulfur domain-containing protein 1 yes no 0 0 0 4 0.816 1 1 1 47.606 47.671 3 6.9185E-06 12907 20230619_1883_Aki_TMTPro18x_K_F4 115.83 79.699 330570 223700 299350 332780 330500 355660 349340 356020 556010 354830 447230 510470 477580 396700 502640 520410 533290 546290 305100 205820 307350 327270 341740 357810 357390 363750 549590 363800 465790 507400 487700 419430 512460 522360 510040 518550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 441910000 12088 53 11433 23148;23149;23150 18589;18590 18590 2 9606 Homo sapiens 0.03437917221481257 HNEIQHMITR Oxidation (M) 1293.6248 0.62480316 4339 Q96E29-3;Q96E29-2;Q96E29;E5RIK9 MTERF3 Transcription termination factor 3, mitochondrial yes no 0 1 0 5 0 1 23.174 23.241 3 0.020173 3857 20230619_1885_Aki_TMTPro18x_K_F5 58.172 40.961 7698 6688.1 9606.7 10564 11562 11552 10642 10820 9401 8433.5 13064 11039 10385 11351 11785 9957 13357 12848 7135.4 6152.1 9633.9 10356 11810 11588 10752 11044 9782.9 8732.5 13104 11111 10767 11616 12035 10198 12761 12174 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8866700 12089 4339 11434 23151 18591 18591 2739 1 9606 Homo sapiens -0.010264252252454753 HNELTGDNVGPLILK Unmodified 1618.8679 0.8678702 4235 Q8N5K1;D6RCF4 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes no 0 0 0 7 0 1 53.031 53.102 3 0.00042706 14994 20230619_1887_Aki_TMTPro18x_K_F7 87.566 68.242 61559 51535 62807 67203 57149 76430 61830 61656 87419 60432 67168 74947 73936 53191 75040 72099 87231 100180 56939 47305 63651 66680 60085 76205 62865 64000 86712 61640 70225 74681 75259 56671 76943 73710 83434 94803 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173670000 12090 4235 11435 23152 18592 18592 1 9606 Homo sapiens 0.08319097980825063 HNESVVK Unmodified 811.41882 0.41881635 1251 A0A140VKF2;O00487;Q53TH1;Q59G89;Q96DE8 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes no 0 0 0 4 0 1 30.052 30.119 3 0.072373 5616 20230619_1883_Aki_TMTPro18x_K_F4 50.04 30.254 23324 14293 28507 25883 44732 43603 32904 41142 29859 24678 36404 42950 28409 30548 33551 22375 42051 36889 21573 13192 28747 25405 44790 42674 33800 41724 30832 26365 36751 42322 29542 31464 34429 23471 40116 34903 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15427000 12091 1251 11436 23153 18593 18593 1 9606 Homo sapiens 0.0055636965781786785 HNFTPLAR Unmodified 954.50355 0.50354903 2292 B2RB23;P42765;A0A0B4J2A4;B3KNP8;K7EME0 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes no 0 0 0 2 0.816 1 1 1 34.861 34.9 3 0.00070908 7606 20230619_1881_Aki_TMTPro18x_K_F2 125.58 100.69 119470 96305 116860 128480 158040 167490 152440 158670 203130 116020 143880 141940 136960 121290 141150 125110 151690 140740 110440 88434 119630 127590 160780 166170 155530 161530 201390 120500 150110 142270 140280 125980 143940 126600 144950 133550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 199410000 12092 2292 11437 23154;23155;23156 18594;18595;18596 18595 3 9606 Homo sapiens 0.024477401944295707 HNIAGTTHSGAEK Unmodified 1321.6375 0.63747633 3796 Q05209;Q05209-2;Q05209-3;H3BM04 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes no 0 0 0 5.5 0.5 1 1 27.619 27.672 4 0.00015713 4991 20230619_1886_Aki_TMTPro18x_K_F6 100.22 81.477 22751 12032 26148 23534 35968 41360 22485 23958 34746 30438 43442 45409 30290 37917 34741 18786 37768 41272 21016 11127 26405 23023 36254 40047 23853 25845 35021 30900 43598 45108 31619 38317 35327 20506 36131 38949 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 12280000 12093 3796 11438 23157;23158 18597;18598;18599 18599 3 9606 Homo sapiens -0.010476905613359122 HNIICLQNDHK Unmodified 1390.6776 0.67756701 3123 J3KN29;O00233;F5H5V4;F5GX23;O00233-2;F5H169 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes no 0 0 0 7.67 0.471 1 2 37.809 37.821 3;4 8.1261E-06 8607 20230619_1888_Aki_TMTPro18x_K_F8 144.1 122.23 74740 50753 72367 78357 76508 78809 82101 84185 97061 93233 88713 99634 93615 77979 75304 92497 103860 87347 69018 46718 73802 76843 79267 79764 82928 85874 97727 93919 91681 100060 94541 81912 78559 92391 98984 83078 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281280000 12094 3123 11439 23159;23160;23161 18600;18601 18601 2 9606 Homo sapiens -0.0021446716243644914 HNINIGITNVDVK Unmodified 1435.7783 0.77832691 2293 H7C3Z2;B2RB38;Q9Y5Y0-2;Q9Y5Y0 FLVCR1 Feline leukemia virus subgroup C receptor-related protein 1 yes no 0 0 0 8 0 1 49.152 49.224 3 0.0017859 13194 20230619_1888_Aki_TMTPro18x_K_F8 84.365 67.339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12095 2293 11440 23162 18602 18602 1 9606 Homo sapiens 0.07786888092050503 HNIQFSSFDIFSDEEVR Unmodified 2068.949 0.94903365 1180 A0A140VJK1;O76003 GLRX3 Glutaredoxin-3 yes no 0 0 0 4.5 0.5 1 1 60.591 60.617 3 2.1794E-13 18591 20230619_1883_Aki_TMTPro18x_K_F4 149.97 122.7 69820 42174 67392 69531 54085 70135 61964 62170 79864 68293 60783 61377 64704 54208 65307 77734 64777 72821 64436 38876 68477 67939 57564 70630 62595 64242 79578 68515 63448 62399 65947 57404 66443 77420 62039 69188 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58155000 12096 1180 11441 23163;23164 18603;18604 18603 2 9606 Homo sapiens -0.04268290837717359 HNITLLWDR Unmodified 1166.6196 0.61964142 1218 A0A2U3TZY2;A0A140VK11;Q9H078-4;Q9H078-2;Q9H078;Q9H078-5;Q9H078-3;Q7Z777 CLPB Caseinolytic peptidase B protein homolog yes no 0 0 0 1 0 1 49.231 49.231 3 0.00022588 14035 20230619_1880_Aki_TMTPro18x_K_F1 122.96 78.759 17453 17261 16609 17083 18507 18573 18156 17729 25182 17752 18887 19067 20459 16346 17521 22784 21076 19260 16153 15795 16970 17298 19063 18665 18539 18174 24985 17996 19740 19216 20691 17290 18093 22580 20118 18337 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15861000 12097 1218 11442 23165 18605 18605 1 9606 Homo sapiens 0.04299638974453046 HNITNTVVCR Unmodified 1212.6033 0.60333943 1195 A0A140VJQ6;Q9BXB4;Q9GZM0 OSBPL11 Oxysterol-binding protein-related protein 11;Oxysterol-binding protein yes no 0 0 0 1.5 0.5 1 1 32.434 32.464 3 2.5867E-14 6979 20230619_1880_Aki_TMTPro18x_K_F1 201.84 169.63 33476 25342 32977 42004 43869 45998 40334 44305 47506 45074 47224 47775 46722 37904 43904 41821 59057 48954 30936 23338 33757 41064 44600 46153 41101 45391 47987 45591 48446 48028 47572 39652 45512 42372 56289 46458 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71690000 12098 1195 11443 23166;23167 18606;18607 18606 2 9606 Homo sapiens 0.005541897460489054 HNKPEVEVR Unmodified 1106.5833 0.58325592 2997 F8WCF6;P59998;F8WDD7;A0A0A6YYG9;P59998-3;P59998-2;Q9H7Z5;H7C0A3;F8WE39 ARPC4-TTLL3;ARPC4 Actin-related protein 2/3 complex subunit 4 yes no 0 0 1 5 0.816 1 1 1 30.924 30.981 4 0.00041574 6020 20230619_1885_Aki_TMTPro18x_K_F5 129.85 107.27 360630 247780 327740 359410 479650 494770 422560 397030 567440 457540 520510 468320 566850 458030 418060 463530 553300 481630 332880 227900 338120 355320 484720 487770 433630 413960 567760 459940 537680 474730 569930 473260 435390 466670 527590 457530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 579940000 12099 2997 11444 23168;23169;23170 18608;18609 18608 2 9606 Homo sapiens 0.0342276207775285 HNLEIIK Unmodified 865.50215 0.50215205 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7 0.816 1 1 1 42.182 42.24 3 0.0064162 10137 20230619_1887_Aki_TMTPro18x_K_F7 101.54 38.056 186270 133980 162040 174870 202760 200520 218670 199050 252960 211040 189320 177370 219690 178080 160920 240130 257690 218010 171920 123060 167310 173570 207710 200830 220480 203780 253210 211740 198430 181740 220550 187000 170420 238820 245350 207450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 605540000 12100 3758 11445 23171;23172;23173 18610;18611 18611 2 9606 Homo sapiens 0.06402106105656458 HNLEYPDFYR Unmodified 1352.6149 0.61494998 4451 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog yes yes 0 0 0 5 0 1 45.476 45.554 3 0.084614 11792 20230619_1885_Aki_TMTPro18x_K_F5 31.597 23.187 45150 36491 45880 49985 40850 48672 48267 47173 56321 47631 45385 46882 54149 42490 52765 51819 50502 56789 41752 33518 46499 49342 43062 49266 48490 48324 56476 48109 47486 47482 54897 44498 53550 52203 48385 53863 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21241000 12101 4451 11446 23174 18612 18612 1 9606 Homo sapiens -0.0472528995896937 HNLLASK Unmodified 781.44464 0.44463717 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 37.364 37.394 3 0.0095357 8652 20230619_1881_Aki_TMTPro18x_K_F2 87.251 40.257 280310 177130 228580 243670 342400 375190 324150 328190 482180 154880 151200 134570 145650 121980 185990 129580 181940 119160 258430 162880 238340 242240 346560 368190 332370 333760 468040 165900 170420 137270 150910 126660 187850 129730 173680 113520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 230420000 12102 2337;3778;3779 11447 23175;23176 18613 18613 1 9606 Homo sapiens 0.045172639000952586 HNLQDFINIK Unmodified 1240.6564 0.65642086 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 3.67 3.09 1 1 1 53.694 53.708 3 7.2656E-10 15833 20230619_1880_Aki_TMTPro18x_K_F1 197.21 150.6 574490 463400 516590 607190 461300 542900 524830 526380 595650 683120 761120 761890 723830 687550 771810 773570 796310 877040 530730 425450 529290 600390 485720 553420 528020 543350 609630 684250 771660 767380 742630 716030 785380 781800 762220 831620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3347499999.9999995 12103 630 11448 23177;23178;23179 18614;18615;18616 18614 3 9606 Homo sapiens 0.04571890800343681 HNLQPFHPK Unmodified 1116.5829 0.58286199 1576 A0A5F9ZHG7;B2RTU6;E9PCH4;Q8TEU7;Q8TEU7-4 RAPGEF6 Rap guanine nucleotide exchange factor 6 yes no 0 0 0 2 0 1 35.459 35.516 4 0.0058405 7894 20230619_1881_Aki_TMTPro18x_K_F2 78.149 48.482 42992 33216 47672 52063 50793 42958 56013 50579 59891 44152 53382 44871 48613 59249 49969 52885 74223 56023 39775 30564 48099 50894 52527 44319 56282 51010 60467 45035 54822 46066 49989 60233 52133 53427 70655 53244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27004000 12104 1576 11449 23180 18617 18617 1 9606 Homo sapiens 0.02923387148553047 HNMCGETEEEK Oxidation (M) 1378.5129 0.51292903 3483 Q6FGJ9;P21266;Q59EJ5;A4UJ43 GSTM3 Glutathione S-transferase Mu 3 yes no 0 1 0 1.5 0.5 1 1 28.073 28.111 3 0.00023292 5188 20230619_1880_Aki_TMTPro18x_K_F1 102.4 95.963 5958.9 2182.8 5560.2 7633 12063 11798 6767.9 10370 12617 6046.6 10759 18739 11062 13159 10007 5473.8 18831 17034 5478.2 2036.6 5788.2 7298.4 11876 11571 7315.6 10571 12425 6737.8 11191 18220 11267 13342 10653 6288.4 17919 16063 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36236000 12105 3483 11450 23181;23182 18618;18619 18618 2135 2 9606 Homo sapiens -0.16118692155214376 HNMCGETEEEK Unmodified 1362.518 0.5180144 3483 Q6FGJ9;P21266;Q59EJ5;A4UJ43 GSTM3 Glutathione S-transferase Mu 3 yes no 0 0 0 2 0.816 1 1 1 31.729 31.76 3 2.3452E-12 6673 20230619_1880_Aki_TMTPro18x_K_F1 172.13 146.21 48599 19761 44426 50115 57415 76968 46866 60136 66875 56138 84846 118790 94237 97622 69063 55337 123810 127710 44765 18391 45715 48383 58489 75298 48535 62470 67657 58882 86808 116850 94848 99148 73602 60394 117960 120520 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 51804000 12106 3483 11450 23183;23184;23185 18620;18621;18622;18623 18621 4 9606 Homo sapiens -0.14874388292605545 HNMDIGTWDNK Oxidation (M) 1345.5721 0.57209888 2661;2415 B4DT65;B3KTL8;Q9BYJ9;Q9BYJ9-2;B5BU99;Q9Y5A9;Q9Y5A9-2 YTHDF1;YTHDF2 YTH domain-containing family protein 1;YTH domain-containing family protein 2 no no 0 1 0 4 0 1 40.753 40.795 3 2.1998E-07 9880 20230619_1883_Aki_TMTPro18x_K_F4 136.96 124.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12107 2415;2661 11451 23186 18624 18624 1491 1 9606 Homo sapiens -0.08686428078704012 HNNLDLVIIR Unmodified 1205.6881 0.68805534 870 A0A087X2E5;A0A087WZN1;O43837-2;O43837;L0R875 IDH3B Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes no 0 0 0 8 0 1 47.342 47.399 3 4.3126E-10 12417 20230619_1888_Aki_TMTPro18x_K_F8 168.29 135.82 58027 45128 52151 56793 50420 58401 64273 56790 75574 59425 60697 57806 63976 51658 56972 72717 63433 57179 53595 41420 53478 56416 52925 58890 64319 58228 75703 59906 63098 58594 64853 54591 58499 71822 60586 54497 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141440000 12108 870 11452 23187 18625 18625 1 9606 Homo sapiens 0.09343883554311105 HNNLYLVATSK Unmodified 1258.667 0.66698555 460 Q9BXS5-2;A0A024R7K8;Q9BXS5;B3KNH5;E7ENJ6;B4DN99;Q59EK3;K7ENA7;K7ER75;K7EQ90;K7EPJ8 AP1M1 AP-1 complex subunit mu-1 yes no 0 0 0 3 0 1 44.701 44.774 3 0.0051022 11752 20230619_1882_Aki_TMTPro18x_K_F3 71.153 54.9 70880 58249 64048 73736 69475 79484 76327 80261 99372 75079 81911 84909 93681 75891 86862 93097 95085 95728 65490 53455 65777 73260 71994 79943 77267 81799 99162 76501 85401 85478 94905 79508 88933 93407 90902 90893 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232670000 12109 460 11453 23188 18626 18626 1 9606 Homo sapiens 0.04799873454794579 HNPTVTGHQEQTYLQK Unmodified 1879.9177 0.91767394 4143 Q71RC2-5;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2;Q71RC2-3;Q71RC2-7;Q96J85 LARP4 La-related protein 4 yes no 0 0 0 7 0 1 36.497 36.565 4 3.2015E-14 7936 20230619_1887_Aki_TMTPro18x_K_F7 171.91 136.58 14963 16195 15142 16942 15141 15730 15700 15570 16876 19677 19709 18180 20282 13002 16455 20585 21636 18326 13865 14822 15375 17039 15733 16008 15842 16031 17255 19610 20099 18354 20474 14001 17107 20424 20628 17442 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34964000 12110 4143 11454 23189 18627 18627 1 9606 Homo sapiens 0.012911809188153711 HNQLPLVIEFTEQTAPK Unmodified 1964.0367 0.036726442 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;A0A7P0T9D6;I3L514 P4HB Protein disulfide-isomerase yes no 0 0 0 7 0.816 1 1 1 59.827 59.875 3 8.9789E-10 17646 20230619_1887_Aki_TMTPro18x_K_F7 140.93 127.95 56796 43197 49064 59844 54614 59440 57026 62344 63858 68953 73161 70673 67513 64006 69356 75102 71195 80522 52436 39693 50630 59041 56371 60194 57595 63658 65062 69366 74372 71458 69211 66812 70632 75580 68165 76388 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 243930000 12111 537 11455 23190;23191;23192 18628 18628 1 9606 Homo sapiens 0.0932695482363215 HNQQLIQEVR Unmodified 1263.6684 0.66838253 937 A0A8I5KX24;A6H8X1;A0A0C4ZLW1;Q66GT8;A0A8I5QKL1;B9EG74;A0A8I5KTP5;A0A8I5KXG0;Q5JTU8;A0A8I5KRU7;B7ZLE9;Q5CZA0;A0A0A0MRG9;A0A8I5KXB5;Q7Z3M0;Q6MZT4;B1AMJ5;B3KVI2;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8 CDK5RAP2;DKFZp686D1070;DKFZp686M1993;DKFZp686E2242 CDK5 regulatory subunit-associated protein 2 yes no 0 0 0 5 0 1 34.091 34.176 3 0.00045059 7218 20230619_1885_Aki_TMTPro18x_K_F5 104.79 60.66 14607 8664.7 14430 15463 16727 17934 19474 22038 21395 12859 18766 20811 16463 17062 14754 15555 21039 19173 13483 7996.6 14717 15084 17261 18027 19537 21978 21540 13735 19289 20641 16823 17628 15383 15859 20057 18179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20241000 12112 937 11456 23193 18629 18629 1 9606 Homo sapiens 0.0470950754356636 HNQRPTFR Unmodified 1054.5421 0.54205981 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98 FLNA Filamin-A yes no 0 0 1 4 0 1 22.983 23.05 3 0.071494 3745 20230619_1883_Aki_TMTPro18x_K_F4 43.979 14.506 80924 60071 77593 91133 121430 121330 109170 123600 129340 85208 105160 115110 94794 88324 95681 88522 123740 101890 74760 55261 79836 89828 122260 120420 111390 125030 129510 89124 108660 114570 97217 91959 98775 89743 117970 96711 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53415000 12113 3484 11457 23194 18630 18630 1 9606 Homo sapiens 0.016970458289506496 HNVIVGR Unmodified 793.45587 0.45587056 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 4.5 3.5 1 1 28.45 28.463 2 0.028806 5405 20230619_1880_Aki_TMTPro18x_K_F1 95.793 82.585 27901 17581 26267 25446 27662 27699 24553 24280 34808 26268 34866 30866 33752 27300 27341 24847 37872 33023 25750 16177 26826 25076 28542 27762 25263 25102 34845 26605 35680 31012 34176 28167 28478 25478 36101 31297 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17795000 12114 4191 11458 23195;23196 18631;18632 18631 2 9606 Homo sapiens 0.050880859942253664 HNVPDDGLPLQSQQLPQSGK Unmodified 2157.0814 0.081444804 142 Q8N523;A0A024R1I7;Q9UBB9;H0Y4U8;B1AHQ3 TFIP11 Tuftelin-interacting protein 11 yes no 0 0 0 6 0 1 47.338 47.419 4 1.467E-08 12761 20230619_1886_Aki_TMTPro18x_K_F6 119.38 106.19 55213 43771 52072 53550 51636 58166 54006 57697 63067 66876 69303 64385 74371 59539 70003 71727 71146 75531 51020 40160 53157 53347 53761 58458 54627 59206 64016 67012 71004 65334 75502 62252 71334 72092 68091 71683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123560000 12115 142 11459 23197 18633 18633 1 9606 Homo sapiens 0.0491873389905777 HNVQTLDIISR Unmodified 1294.6993 0.69934831 2042 Q53H22;A8K4H7;Q06203 PPAT Amidophosphoribosyltransferase yes no 0 0 0 7.5 0.5 1 1 41.939 41.973 3 1.1849E-12 10046 20230619_1887_Aki_TMTPro18x_K_F7 208.33 162.76 66433 56617 66796 62368 67680 63169 71439 66768 73644 76922 88470 74496 82506 65599 92687 79103 82583 80702 61447 51881 67794 62570 70225 63956 71904 68246 75494 77108 89749 75488 84823 68705 93438 79411 79100 76641 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 396070000 12116 2042 11460 23198;23199 18634;18635 18634 2 9606 Homo sapiens 0.06378660857808427 HNWGQGFR Unmodified 1000.4627 0.46274685 571 A0A024R9G3;Q9BUN8-2;Q9BUN8;B4E1G1;E5RGY0 DERL1 Derlin-1 yes no 0 0 0 2 0.816 1 1 1 35.115 35.152 3 4.6972E-11 7716 20230619_1881_Aki_TMTPro18x_K_F2 195.6 168.6 144330 121810 157870 147150 162580 183830 180380 176350 199480 174260 185710 181140 203850 158750 182320 177130 200670 202160 133590 111730 159270 147050 168970 182920 181430 180600 201530 176480 191960 182830 206370 165580 186750 179130 191840 191740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 247820000 12117 571 11461 23200;23201;23202 18636;18637 18636 2 9606 Homo sapiens -0.03746601125192228 HNYEGTLR Unmodified 988.47264 0.47264284 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 4 0.816 1 1 1 28.508 28.594 3 0.00086325 5064 20230619_1882_Aki_TMTPro18x_K_F3 105.25 77.075 15280 10280 15210 16479 21410 25061 17824 24652 32949 16936 28122 25569 24527 18295 23322 19894 30440 34797 14113 9467.6 15559 16236 21695 24662 18653 24980 32443 17818 28896 25339 25081 19228 24110 20804 29086 32877 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55064000 12118 1601 11462 23203;23204;23205 18638;18639 18638 2 9606 Homo sapiens -0.022054579104633376 HNYPDLVER Unmodified 1141.5516 0.55162144 2354 B3KMQ6;Q9NZT2-2;Q9NZT2;Q05BV5;V9H0E3;V9H0H8;Q4VXW3 OGFR Opioid growth factor receptor yes no 0 0 0 3 0 1 36.756 36.811 3 0.00012522 8276 20230619_1882_Aki_TMTPro18x_K_F3 135.63 121.43 29911 19246 26252 25486 28215 28847 30007 29640 39998 32322 33518 34762 33588 28653 29267 30703 39472 31264 27593 17689 26994 25274 29208 28936 30455 30295 39902 32610 34700 34957 34087 29865 30403 30854 37611 29719 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36820000 12119 2354 11463 23206 18640 18640 1 9606 Homo sapiens -0.013492306761918371 HPAATAQLETAVR Unmodified 1363.7208 0.72081203 2939 E9PMS3;E9PQW0;E9PMM3;Q9Y5Y5;Q9Y5Y5-2 PEX16 Peroxisomal membrane protein PEX16 yes no 0 0 0 6 0 1 35.843 35.903 3 3.068E-36 7942 20230619_1886_Aki_TMTPro18x_K_F6 227.48 190.42 17572 10760 14522 16758 16053 18712 16151 20050 24412 16231 18328 22288 21412 19998 20748 20352 23959 21117 16199 9910.7 15042 16449 16589 18791 16539 20280 24135 16807 19253 22268 21743 20710 21282 20495 22873 20059 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75689000 12120 2939 11464 23207 18641 18641 1 9606 Homo sapiens 0.05350045886530097 HPAKPDPSGECNPDLR Unmodified 1788.8213 0.82133071 2910 E9PC52;Q6FHQ0;Q16576;Q16576-2;Q5JP01 RBBP7 Histone-binding protein RBBP7 yes no 0 0 1 4.4 1.02 1 2 1 1 35.067 35.128 3;4 8.394E-08 7537 20230619_1885_Aki_TMTPro18x_K_F5 130.4 120.3 109970 84612 110290 112550 120180 118450 129710 127230 129300 135840 151400 143440 159300 130850 140570 139780 155100 134580 101650 77709 112160 111460 124150 119550 130240 129610 132670 137020 154590 144870 161390 135870 144050 140070 148120 127950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 973140000 12121 2910 11465 23208;23209;23210;23211;23212 18642;18643;18644 18644 3 9606 Homo sapiens -0.041527099127961264 HPASEAEIQPQTQVTLR Unmodified 1903.9752 0.97518882 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-5;Q13308-3;Q59FV9;Q86X91;B7Z471;F8WDG7 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 4.5 0.5 1 1 40.217 40.283 3 6.9922E-31 9648 20230619_1883_Aki_TMTPro18x_K_F4 240.5 211.53 51635 37595 51207 44689 52631 58250 54558 54154 59986 59119 62715 71789 68567 56533 58136 66371 77067 78577 47709 34495 52034 44749 54611 57782 55083 55732 60927 59862 64530 71755 69305 59358 60388 67195 73565 74498 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 193500000 12122 3847 11466 23213;23214 18645;18646 18645 2 9606 Homo sapiens 0.059360231243317685 HPDADSLYVEK Unmodified 1272.5986 0.59863121 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 43.129 43.184 3 0.00023955 10982 20230619_1882_Aki_TMTPro18x_K_F3 107.85 79.041 463000 366330 408390 475330 375320 443830 425540 395670 463950 619810 739770 879230 765610 703960 670720 835850 837070 962750 427620 336320 419310 470520 394200 450080 427630 413930 481900 621980 748030 874500 776450 738640 693840 844400 800170 912610 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 439910000 12123 1102 11467 23215;23216 18647;18648;18649 18648 3 9606 Homo sapiens -0.02676415915743746 HPDASVNFSEFSK Unmodified 1463.6681 0.66810776 772 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;A0A286R9D9;Q75MM1;Q9NYD7 HMGB1;WUGSC:H_NH0244E06.1;HMG1 High mobility group protein B1 yes no 0 0 0 5 0 1 48.754 48.831 3 0.0017347 13272 20230619_1885_Aki_TMTPro18x_K_F5 75.669 57.925 167470 135860 162030 166610 146330 192940 170930 168570 194040 179690 184650 170850 189150 167570 179050 208040 202310 228370 154810 124650 164880 166070 154180 192470 171670 174190 195970 180810 190010 173850 192500 175130 183700 209440 193530 216590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 287540000 12124 772 11468 23217 18650 18650 1 9606 Homo sapiens -0.045179569669471675 HPDIEAQER Unmodified 1093.5152 0.51523593 1440 B2R694;A0A384MTQ5;P48449-3;P48449;A0A0G2JQD0;P48449-2;H7C3A5 LSS Terpene cyclase/mutase family member;Lanosterol synthase yes no 0 0 0 1.5 0.5 1 1 29.428 29.464 3 1.8981E-06 5800 20230619_1880_Aki_TMTPro18x_K_F1 159.79 128.3 60375 45198 69913 70511 72194 66501 65168 66767 71934 80469 86586 95437 92978 75806 86582 69198 102360 88188 55870 41593 70238 69054 74492 67570 66378 68578 73547 81014 88493 95448 94367 78530 88916 70777 97690 83613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109100000 12125 1440 11469 23218;23219 18651 18651 1 9606 Homo sapiens -0.02778107572908084 HPDSHQLFIGNLPHEVDK Unmodified 2082.0283 0.028287021 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7I2V5M7;A0A7P0P2U7;B7Z8K4;Q6ZP53;A0A7I2YQH0;A0A7I2V2X7 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 5.5 0.5 1 1 46.074 46.156 5 2.5178E-05 12147 20230619_1886_Aki_TMTPro18x_K_F6 95.658 86.839 57322 37811 61434 65870 52935 60833 56814 58186 73338 89152 75441 77787 99566 82472 59724 114910 92718 128430 52971 34865 61959 64105 55796 61800 57606 60457 73990 88093 78320 79676 98977 86692 63574 115510 88640 121710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1075800000 12126 3846 11470 23220;23221 18652 18652 1 9606 Homo sapiens 0.030554009070328902 HPDSHQLFIGNLPHEVDKSELK Unmodified 2539.2819 0.28193553 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7I2V5M7;A0A7P0P2U7;B7Z8K4;Q6ZP53;A0A7I2YQH0;A0A7I2V2X7 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 0 1 7.5 0.5 1 1 48.945 49.021 6 2.2502E-23 13119 20230619_1888_Aki_TMTPro18x_K_F8 174.71 154.98 379150 346460 418310 465660 428220 490650 371110 392800 399250 526450 418130 416310 421210 322720 365900 441660 420480 299950 351140 318030 422040 460590 442540 491960 378710 411610 406840 521300 428200 424160 426940 342290 376430 433840 400950 286840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1737099999.9999998 12127 3846 11471 23222;23223 18653;18654 18654 2 9606 Homo sapiens 0.07386583495826926 HPDSSVNFAEFSK Unmodified 1463.6681 0.66810776 4068;3509 Q5U071;D6R9A6;P26583 HMGB2 High mobility group protein B2 no no 0 0 0 6.25 1.48 1 1 1 1 48.686 48.753 3 8.7763E-08 13267 20230619_1886_Aki_TMTPro18x_K_F6 148.08 94.328 302840 250440 264890 313570 213530 261000 285600 289790 303610 333220 321260 361150 328910 304600 281600 343890 388730 443410 279760 229800 271790 310800 228070 268540 284460 295340 309130 335150 329360 363250 333480 318200 293450 350290 371280 419900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 991550000 12128 4068;3509 11472 23224;23225;23226;23227 18655;18656 18655 2 9606 Homo sapiens -0.04517956966969905 HPDVEVDGFSELR Unmodified 1498.7052 0.70522155 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9;Q05D33;Q6PJL0;A0A7I2V384 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 1.5 0.5 1 1 47.919 47.954 3 1.7357E-21 13510 20230619_1880_Aki_TMTPro18x_K_F1 184.96 139.71 294550 198490 233890 282650 256470 314450 300130 318570 334460 329550 336830 375220 349520 326310 293690 367170 400220 369760 271600 182540 243340 278820 266210 315470 301170 325410 338920 333820 346250 377070 353980 340200 305900 368280 381690 351280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1595599999.9999998 12129 261 11473 23228;23229 18657;18658 18657 2 9606 Homo sapiens -0.024182854212085658 HPDVSMVDPEALAIEQNLGK Oxidation (M) 2178.0627 0.062683196 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 1 0 5 0 1 57.432 57.49 3 0.0096871 16870 20230619_1885_Aki_TMTPro18x_K_F5 52.731 45.366 13389 12280 14915 14824 14199 15883 16521 15426 18307 16708 19493 19041 17473 17905 18380 18864 20869 20007 12401 11260 15014 14779 14864 15972 16580 15830 18585 16894 19856 19190 17964 18544 18814 19007 19938 18994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11208000 12130 630 11474 23230 18659 18659 366 1 9606 Homo sapiens 0.020774362129941437 HPDYAILAAR Unmodified 1125.5931 0.59309232 2555 B4DNN4;Q53GZ5;P23921 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 0 0 0 7.5 0.5 1 1 41.49 41.524 3 1.5065E-06 9853 20230619_1887_Aki_TMTPro18x_K_F7 137.95 117.92 162390 130060 136700 142300 156200 182270 151200 155500 185530 130520 134530 113460 139420 109090 123280 138390 140390 111500 149940 119200 141330 143260 160770 180670 153800 160000 184900 132870 140490 115940 141350 114240 126660 137070 133950 106290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 324640000 12131 2555 11475 23231;23232 18660;18661 18660 2 9606 Homo sapiens 0.035319500831292316 HPEAILTPMPEGLSQQQVVR Oxidation (M) 2245.1525 0.15250126 1393 H0YAN8;A0A2X0U4L4;O15013-7;O15013-4;O15013-5;O15013-6;O15013;E9PB39 ARHGEF10 Rho guanine nucleotide exchange factor 10 yes no 0 1 0 6 0 1 47.758 47.839 3 1.2113E-06 12953 20230619_1886_Aki_TMTPro18x_K_F6 93.371 84.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12132 1393 11476 23233 18662 18662 868 1 9606 Homo sapiens 0.07973110612238088 HPEELSLLK Unmodified 1064.5866 0.58660996 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;G3V281;G3V5R2;G3V3J0 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 5 0 1 47.622 47.698 3 0.00021872 12773 20230619_1885_Aki_TMTPro18x_K_F5 123.86 66.265 73446 65283 72434 80308 72662 99646 93440 95241 94869 90704 85252 88931 106810 85726 76476 108200 106900 102010 67942 59876 73757 80116 76147 99132 93048 97455 96209 91865 88870 90286 106890 89744 80149 107920 101950 96970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98209000 12133 385 11477 23234 18663 18663 1 9606 Homo sapiens 0.05690012131753974 HPEIFVNFMEPCYGSCTER Oxidation (M) 2387.9973 0.99732252 511 A0A8Q3SHZ4;A0A494C1F2;A0A024R8B6;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A8Q3WLX1;A0A494BZU9 NUP214 Nuclear pore complex protein Nup214 yes no 0 1 0 5 0 1 53.053 53.125 3 0.012387 15111 20230619_1885_Aki_TMTPro18x_K_F5 49.973 48.895 18558 15069 17553 21724 18996 21754 18886 19525 24036 23793 25233 23467 26712 21067 22221 26984 26886 24334 17151 13849 17961 21378 19632 21938 19214 20218 24248 23812 25880 23768 26994 22128 22958 26860 25661 23150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13579000 12134 511 11478 23235 18664 18664 305 1 9606 Homo sapiens -0.14115624576015762 HPEIFVNFMEPCYGSCTER Unmodified 2372.0024 0.0024079005 511 A0A8Q3SHZ4;A0A494C1F2;A0A024R8B6;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A8Q3WLX1;A0A494BZU9 NUP214 Nuclear pore complex protein Nup214 yes no 0 0 0 6.5 0.5 1 1 58.098 58.158 3 6.9593E-05 17366 20230619_1886_Aki_TMTPro18x_K_F6 85.974 83.63 25110 19687 21421 30007 21979 23578 27325 25191 29293 28133 30154 30509 31658 27801 29477 36916 36519 38989 23184 18108 22129 29349 22930 24360 27296 25726 29761 28348 30969 30790 32174 29248 30444 37041 34890 37001 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22960000 12135 511 11478 23236;23237 18665 18665 1 9606 Homo sapiens -0.12871320713384193 HPELADK Unmodified 808.40792 0.40791731 3594;1322 A0A1W2PQS6;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A2R8Y6L3;S4R435;P46783;Q59GE4;Q9NQ39 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like no no 0 0 0 3 0.816 1 1 1 34.79 34.846 3 0.015221 7630 20230619_1881_Aki_TMTPro18x_K_F2 84.476 27.195 38567 21262 46790 45394 51186 54718 47458 47866 45629 49105 64621 65974 53780 49360 53637 32525 64942 59292 35652 19686 46900 43939 52669 54426 48049 49414 47338 50055 64946 65583 55245 50588 55044 34532 61988 56053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2222000000 12136 1322;3594 11479 23238;23239;23240 18666 18666 1 9606 Homo sapiens -0.003950327164830014 HPELFEALGIAQPK Unmodified 1548.83 0.83002813 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8;Q59GS3;J3QSA9;J3KRP2;J3QQM1;J3QRR3;J3QLH6;J3QRW1;A0A994J6H0;J3QSE0 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 7.5 0.5 1 1 58.234 58.283 3 7.0856E-12 17049 20230619_1888_Aki_TMTPro18x_K_F8 182.1 157.17 291690 229000 275660 318390 266070 319020 301340 309160 364340 376280 343540 353440 388140 320440 326030 404050 358090 397810 269520 210410 281500 314090 278390 322200 303800 318320 367000 375990 355430 358690 391730 336130 334840 404110 342590 377760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271820000 12137 1202 11480 23241;23242 18667 18667 1 9606 Homo sapiens 0.07756631785991885 HPENYDLATLK Unmodified 1299.6459 0.64591575 2144;1327 A0A1W6S962;X5D7Q9;P78347-5;A0A0A0VEB4;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52 GTF2I;GTF2I-RARA General transcription factor II-I no no 0 0 0 5 0.816 1 1 1 46.193 46.261 3 2.0626E-06 12158 20230619_1885_Aki_TMTPro18x_K_F5 153.54 126.13 530780 443950 499420 527340 552660 591210 503790 528100 641570 616990 658550 644370 621330 613860 626290 671710 740170 722080 490620 407120 510800 526580 568700 591690 515280 546210 646530 619810 673190 651950 636260 636980 643290 676820 706970 685370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1329700000 12138 1327;2144 11481 23243;23244;23245 18668;18669 18668 2 9606 Homo sapiens 0.008078633552713654 HPEQIFPR Unmodified 1022.5298 0.52976379 3765 Q86WV4;P82933 MRPS9 28S ribosomal protein S9, mitochondrial yes no 0 0 0 7 0 1 37.508 37.572 3 0.00047891 8262 20230619_1887_Aki_TMTPro18x_K_F7 138.54 110.53 43299 33459 38828 43773 47823 48450 43151 48505 55142 54145 58973 60025 62287 52528 53327 62979 62362 59663 39989 30723 39971 43413 48835 48647 44169 49684 55663 54597 60467 60424 63041 54976 54934 62912 59561 56713 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83573000 12139 3765 11482 23246 18670 18670 1 9606 Homo sapiens 0.019400093658987316 HPESNTAGMDIFAK Oxidation (M) 1532.6929 0.6929423 2612 B4DWC4;Q6FIC5;Q9Y696;B3KTR3;Q9NVF8 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 1 0 4.5 0.5 1 1 42.816 42.879 3 1.8944E-05 10704 20230619_1885_Aki_TMTPro18x_K_F5 110.98 98.424 70024 62531 77628 64950 74297 74122 69491 69333 70672 80851 88980 82009 85307 65068 71797 96719 85303 84020 64845 57261 78076 65579 77215 74205 70448 71466 72711 81097 90209 82687 86489 69365 74132 95896 81478 79942 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228130000 12140 2612 11483 23247;23248 18671 18671 1571 1 9606 Homo sapiens -0.052096451558782064 HPESNTAGMDIFAK Unmodified 1516.698 0.69802768 2612 B4DWC4;Q6FIC5;Q9Y696;B3KTR3;Q9NVF8 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 0 0 5.5 0.5 1 1 48.34 48.417 3 1.0499E-08 13192 20230619_1886_Aki_TMTPro18x_K_F6 153.7 137.04 416590 447900 479290 331230 308590 398790 364230 342260 343340 529650 499370 461970 530070 451670 400040 536680 558180 548930 386450 408910 478190 345840 335720 397290 363920 358510 358020 522930 505970 471720 533900 470880 418550 538220 532470 521280 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 461560000 12141 2612 11483 23249;23250 18672;18673;18674 18674 3 9606 Homo sapiens -0.03965341293246638 HPFAQAVGR Unmodified 981.51445 0.51444807 870 A0A087X2E5;A0A087WZN1;O43837-2;O43837;O43837-3;A0A0D9SG66;Q9UIC5 IDH3B Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes no 0 0 0 1.5 0.5 1 1 32.951 32.951 3 1.3013E-07 6848 20230619_1881_Aki_TMTPro18x_K_F2 130.22 105.45 22767 41633 32213 32463 33064 60074 42402 43322 31619 30944 32305 39610 35436 27606 56222 30116 67585 43194 21286 37977 31994 33928 34651 58235 41885 45062 32853 32194 33362 39384 37063 29032 57270 31036 64386 40977 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10648000 12142 870 11484 23251;23252 18675;18676 18676 2 9606 Homo sapiens 0.02295142568709707 HPFIVNHPK Unmodified 1087.5927 0.59269839 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;Q59EC0 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 2.5 0.5 1 1 35.143 35.2 4 9.9317E-05 7731 20230619_1881_Aki_TMTPro18x_K_F2 143.01 93.197 395650 276900 356130 409990 411250 461860 465850 443610 509380 457200 514280 463660 497740 411360 478990 511490 514590 451330 365210 254720 366280 403580 424410 462490 467780 454870 516430 461630 526400 468960 507560 431300 489530 508990 491570 429540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 397070000 12143 1718;4020 11485 23253;23254 18677;18678 18677 2 9606 Homo sapiens 0.0524057515392542 HPFPGPGLAIR Unmodified 1160.6455 0.64546224 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 4 0 1 44.669 44.714 3 5.9685E-05 11632 20230619_1883_Aki_TMTPro18x_K_F4 128.27 98.931 222740 195640 220790 198200 190270 234320 255150 207250 274780 207130 172190 164680 173720 165080 217490 214590 197720 181950 206040 179130 223920 200590 201960 233630 253960 213700 274570 208250 181650 169190 179500 172800 219270 213050 189260 173220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 509860000 12144 1182 11486 23255 18679 18679 1 9606 Homo sapiens 0.0715653321674381 HPFVDSNLLYQFR Unmodified 1634.8205 0.82052608 4263 Q8TB45-2;Q8TB45 DEPTOR DEP domain-containing mTOR-interacting protein yes no 0 0 0 3 0 1 57.48 57.513 3 0.019482 17454 20230619_1882_Aki_TMTPro18x_K_F3 46.744 23.865 28618 24365 26768 27833 28513 33519 28620 32481 40007 33987 28785 32526 34754 30584 30902 33023 35144 35615 26455 22334 27379 27906 29523 33438 29207 33276 39672 34239 30346 32999 35115 31745 31735 33288 33588 33798 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14290000 12145 4263 11487 23256 18680 18680 1 9606 Homo sapiens 0.02850863500475498 HPFVQEK Unmodified 883.4552 0.45520186 3551 Q05DK5;P35612-4;P35612-3;P35612;P35612-2;P35612-8;P35612-9 ADD2 Beta-adducin yes no 0 0 0 7 0 1 36.068 36.136 3 5.7672E-05 7759 20230619_1887_Aki_TMTPro18x_K_F7 180.7 121.72 72099 53833 68236 90308 87333 89094 51496 57593 70131 79359 98674 91642 78520 81368 81512 71462 99242 85766 66602 49587 70011 88065 88243 89449 54664 61643 71574 79431 98959 92103 81018 83696 83750 72825 94689 81359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51363000 12146 3551 11488 23257 18681 18681 1 9606 Homo sapiens 0.008812465545247505 HPGDPERLPK Unmodified 1144.5989 0.59890598 3121 I6MBV4;Q9H4W6-2;H0Y3W9;A8K0Z7;B4E2U8;Q658Y5;E5RFQ1;Q9UH73-2;Q9UH73;Q9H4W6;B4E172;A0A087WTE5;A0A0A0MSW2;Q9BQW3;E9PEI2;Q9BQW3-1 EBF3;DKFZp667I0324;EBF1;EBF4 Receptor protein-tyrosine kinase;Transcription factor COE3;Transcription factor COE1;Transcription factor COE4 yes no 0 0 1 5.5 0.5 1 1 33.381 33.444 4 0.0074154 6943 20230619_1885_Aki_TMTPro18x_K_F5 76.85 42.772 47542 42714 47321 44231 57219 41565 61294 60378 54539 49587 61319 51797 57202 43128 55474 55540 64752 48156 43986 39112 48200 44570 58553 42741 61360 60088 56186 50731 62362 52252 58396 45441 56945 55207 61749 45878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22098000 12147 3121 11489 23258;23259 18682 18682 1 9606 Homo sapiens 0.03239048594787164 HPGGGDYEEL Unmodified 1072.4462 0.44615331 3969 Q3YEC7;Q3YEC7-2;B3KXX7 RABL6 Rab-like protein 6 yes no 0 0 0 1 0 1 40.099 40.099 2 0.033528 10122 20230619_1880_Aki_TMTPro18x_K_F1 68.915 58.501 54686 41400 57665 62087 65981 71665 60464 57959 76974 74759 89355 91904 84206 78625 74084 87287 97037 88805 50566 38077 58476 61087 67738 71412 61811 60630 77963 75199 90869 92066 85687 81953 76848 87633 92565 84361 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98651000 12148 3969 11490 23260 18683 18683 1 9606 Homo sapiens -0.08717191592472773 HPGSFDVVHVK Unmodified 1220.6302 0.63020611 2202 Q96IR1;B2R491;P62701;Q53HV1;C9JEH7;A4FU11;Q496E4;P22090 RPS4X;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 yes no 0 0 0 7.5 0.5 1 1 40.907 40.937 4 5.7589E-09 9617 20230619_1887_Aki_TMTPro18x_K_F7 152.7 135.67 328760 320730 342450 358040 329300 360990 302370 278300 359640 409030 380000 378340 386400 336160 287240 376070 368130 380190 304470 293800 346550 358590 342400 363110 308380 293700 364360 405470 389040 383840 389530 350280 298800 377270 351530 361020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 657860000 12149 2202 11491 23261;23262 18684;18685 18684 2 9606 Homo sapiens 0.028716216289012664 HPHDIIDDINSGAVECPAS Unmodified 2045.9113 0.91126793 3530 P30050;Q59FI9;P30050-2 RPL12 60S ribosomal protein L12 yes no 0 0 0 3 1.41 1 1 1 1 1 49.185 49.236 3 1.3065999999999998E-19 14042 20230619_1880_Aki_TMTPro18x_K_F1 180.49 171.67 276790 181770 267540 274890 244740 283200 271360 261310 371480 360950 365360 338800 367010 327580 292260 434050 343540 371320 255560 167300 272250 269970 257030 285140 275200 271170 372540 358910 374910 344780 371110 343760 302150 430540 328390 353250 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 7491299999.999999 12150 3530 11492 23263;23264;23265;23266;23267 18686;18687;18688;18689;18690 18686 5 9606 Homo sapiens -0.06985125094888645 HPLTQELK Unmodified 964.53418 0.53418046 3764 P82932 MRPS6 28S ribosomal protein S6, mitochondrial yes yes 0 0 0 6.5 0.5 1 1 38.782 38.855 3 3.8129E-05 8777 20230619_1887_Aki_TMTPro18x_K_F7 175.51 115.08 135140 114880 137230 139160 174370 180760 171730 160490 187790 137380 147860 129730 152370 139820 144310 168630 185250 128550 125010 105370 139800 139090 178000 179190 173730 164740 188680 139990 153680 132570 155130 145320 149260 166710 176450 122730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 279930000 12151 3764 11493 23268;23269 18691;18692 18692 2 9606 Homo sapiens 0.05049473788812975 HPPAPAEPSSDLASK Unmodified 1502.7365 0.73652168 1989 Q9P2E9;A7BI36;Q9P2E9-3;A1A5C5;A1A5C4;F8W7S5;B3KSG1;A0A087WU26 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 4 0 1 39.552 39.594 3 5.3302E-14 9363 20230619_1883_Aki_TMTPro18x_K_F4 176.4 158.6 63215 57517 68387 56131 62995 77232 71020 76961 92680 83513 92892 90868 96378 86022 86038 105740 103200 106670 58534 52640 68895 57150 66155 76499 71844 78767 93164 84300 95425 91804 97808 89918 88729 105940 98596 101290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72362000 12152 1989 11494 23270 18693 18693 1 9606 Homo sapiens 0.005262876128881544 HPPGDEIYR Unmodified 1082.5145 0.51450765 3351 O95251-2;O95251-4;O95251;B4DJ40;E7EUP3;B7Z4D9;B3KVJ2;A0A6Q8PHH2;O95251-3;O95251-5;B4DG18 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase yes no 0 0 0 2.5 0.5 1 1 33.094 33.158 3 0.001903 6816 20230619_1882_Aki_TMTPro18x_K_F3 76.345 62.138 32357 21772 34636 30921 35482 40191 34909 35466 46575 37216 52785 48382 50777 44529 47120 36713 57999 48945 29904 20022 34984 30596 36795 39816 35608 36602 46979 37887 53740 48485 51726 45653 48515 37746 55325 46391 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26298000 12153 3351 11495 23271;23272 18694 18694 1 9606 Homo sapiens -0.023449022219665494 HPPGDEIYRK Unmodified 1210.6095 0.60947067 3351 O95251-2;O95251-4;O95251;B4DJ40;E7EUP3;B7Z4D9;B3KVJ2;A0A6Q8PHH2;O95251-3;O95251-5 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase yes no 0 0 1 6 0 1 35.083 35.136 4 0.059473 7675 20230619_1886_Aki_TMTPro18x_K_F6 48.004 31.372 48198 37391 41372 45730 50504 47118 51445 47932 59078 51787 59948 56244 54595 44084 44616 70294 71672 55925 44500 34309 42750 45520 51716 47587 52041 49030 59757 52274 61190 56543 55434 47242 47175 69333 68205 53328 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29416000 12154 3351 11496 23273 18695 18695 1 9606 Homo sapiens 0.012590312492193334 HPQLEAVLMGTR Unmodified 1350.7078 0.70780451 4254 Q8NFF5-2;Q8NFF5;Q8NFF5-3;Q5T190 FLAD1 FAD synthase;Molybdenum cofactor biosynthesis protein-like region;FAD synthase region yes no 0 0 0 1 0 1 47.903 47.903 3 0.0053137 13492 20230619_1880_Aki_TMTPro18x_K_F1 77.644 56.272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12155 4254 11497 23274 18696 18696 1 9606 Homo sapiens 0.04647891502759194 HPQPGAVELAAK Unmodified 1216.6564 0.65642086 2980 F8VPD4;P27708;Q53SY7;H7C2E4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 6 0.816 1 1 1 39.811 39.892 3 1.0667E-05 9474 20230619_1886_Aki_TMTPro18x_K_F6 134.56 105.61 197190 142260 168430 170800 209260 258070 223800 222540 246150 260770 272510 261430 297110 232150 229160 274550 281970 282150 181980 130560 174170 171290 214810 253440 225480 230710 250670 261510 279280 264420 299100 242800 237380 275510 269280 267910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 745260000 12156 2980 11498 23275;23276;23277 18697 18697 1 9606 Homo sapiens 0.05675890800353045 HPSAVTACNLDLENLVTDSNR Unmodified 2325.1019 0.10192225 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 7 0 1 54.213 54.277 3 2.6911E-07 15445 20230619_1887_Aki_TMTPro18x_K_F7 105.52 95.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12157 4753 11499 23278 18698 18698 1 9606 Homo sapiens -0.007624635034517269 HPSKPDPSGECNPDLR Unmodified 1804.8162 0.81624534 3814 Q09028-3;Q09028-2;Q09028;Q09028-4 RBBP4 Histone-binding protein RBBP4 yes no 0 0 1 5.5 1.12 1 1 1 1 34.94 35.007 4 9.1304E-08 7279 20230619_1887_Aki_TMTPro18x_K_F7 129.05 118.24 14114 8732.7 12833 12638 13339 15938 15045 14514 15445 16083 19043 16028 17363 15200 14212 18135 19761 15477 13021 8035.7 13151 12483 13872 15826 15087 14966 15852 16169 19271 16261 17630 15856 14834 18018 18823 14744 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109210000 12158 3814 11500 23279;23280;23281;23282 18699 18699 1 9606 Homo sapiens -0.053970137754049574 HPVCLLVLGMAGSGK Unmodified 1537.8109 0.81088937 4007 Q53RZ9;Q9HCN4;F8WD09;Q9HCN4-5 MBDin;GPN1 GPN-loop GTPase 1 yes no 0 0 0 6 0 1 57.561 57.63 3 0.00063768 17109 20230619_1886_Aki_TMTPro18x_K_F6 82.55 62.169 36199 29215 31435 31218 27277 31717 30853 32558 42177 35367 31040 32385 35886 31320 34452 42046 37171 36747 33433 26770 32263 31390 28804 32064 31258 33274 41879 35520 32595 32986 36419 32901 35250 41761 35536 34960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42298000 12159 4007 11501 23283 18700 18700 1 9606 Homo sapiens 0.06349635899050554 HPVNAACFSPDGAR Unmodified 1497.6783 0.67829529 4291 Q92466-4;Q92466 DDB2 DNA damage-binding protein 2 yes no 0 0 0 6.5 0.5 1 1 37.166 37.232 3 7.0096E-07 8159 20230619_1887_Aki_TMTPro18x_K_F7 110.25 99.926 12373 10620 16068 14770 16634 19424 19576 17204 22662 15600 16981 18844 18447 14063 17702 13990 21629 18854 11473 9754.5 16021 14635 17311 19230 19653 17691 22662 15964 17769 18808 18741 14674 18207 14345 20637 17867 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29829000 12160 4291 11502 23284;23285 18701 18701 1 9606 Homo sapiens -0.050636725133699656 HPVSEYK Unmodified 858.42357 0.42356738 4243 Q8NBJ5;Q8WUI9;Q9H6F1;B3KQ10 COLGALT1;GLT25D1 Procollagen galactosyltransferase 1 yes no 0 0 0 5.5 0.5 1 1 33.172 33.234 3 0.019722 6885 20230619_1885_Aki_TMTPro18x_K_F5 77.282 55.255 28097 15257 34111 39843 54649 56742 36897 52508 47418 24859 41769 48430 35428 39289 42619 21290 46782 43169 25972 14182 34484 38376 54639 55943 38595 53153 47403 27349 42902 47758 36768 39849 43318 22987 44696 40784 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42199000 12161 4243 11503 23286;23287 18702 18702 1 9606 Homo sapiens -0.011307461994306323 HPVTGQFLYQDSNWASK Unmodified 1976.9381 0.93807503 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 1.5 0.5 1 1 52.39 52.41 3 2.2324E-18 15309 20230619_1880_Aki_TMTPro18x_K_F1 176.42 167 194970 155720 193040 165810 137890 176860 123210 129280 157640 155880 132070 128970 156260 120560 129640 160600 147980 132420 180240 142680 195210 166880 147480 176950 126350 136100 157770 155360 137720 131880 157390 126790 133470 159080 141300 126130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 779150000 12162 1817 11504 23288;23289 18703 18703 1 9606 Homo sapiens -0.011316484213693911 HPWICQR Unmodified 995.47595 0.47595408 1836 E9PBG7;Q13557-6;A0A994J5B0;D6R938;A0A8V8TNA7;A0A8V8TN65;A0A8V8TND4;Q13557-10;Q13557-8;E9PF82;Q13557-11;Q13557;B7Z2B0;A0A8V8TPK3;Q13557-3;A0A8V8TN88;A0A994J516;A0A8V8TN60;A0A8V8TPY4;A0A8V8TPJ8;A0A8V8TNA1;A0A994J7X8;Q13557-12;Q13557-5;Q13557-9;Q13557-4;A0A8V8TPM4;Q4G1A8;A0A8V8TNN9;H0Y9C2 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 2.5 0.5 1 1 34.391 34.45 3 0.014701 7369 20230619_1882_Aki_TMTPro18x_K_F3 79.454 60.359 107790 117830 127630 97815 128000 149120 127730 134920 157370 107560 136690 127190 110270 110650 140070 84976 140010 122820 100030 107650 127840 101280 132970 146640 129770 138020 157600 110870 140050 127650 114910 113300 141590 88125 133850 116320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67618000 12163 1836 11505 23290;23291 18704;18705 18705 2 9606 Homo sapiens -0.0219648633747056 HPWVCQR Unmodified 981.4603 0.46030401 1721 A0A8V8TQ77;A0A804CJ50 no no 0 0 0 1.5 0.5 1 1 31.788 31.82 3 0.007239 6422 20230619_1881_Aki_TMTPro18x_K_F2 89.903 64.284 50032 34567 48255 49085 53185 45073 48755 51169 64626 40692 52617 48330 51155 41575 44006 47334 51696 52899 46205 31785 49222 48327 54658 46046 49916 51584 64371 41956 54444 48527 51913 43426 45316 47777 49396 50180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20491000 12164 1721 11506 23292;23293 18706 18706 1 9606 Homo sapiens -0.03116772854514238 HPYFYAPELLYYANK Unmodified 1887.9196 0.91957142 2776 CON__P02769 yes yes 0 0 0 3 0 1 61.692 61.721 3 0.0010432 19133 20230619_1882_Aki_TMTPro18x_K_F3 72.891 64.292 + 385240 346770 429740 443660 594470 675620 573030 522420 495820 479630 439540 452990 484880 397390 403390 458500 476130 581440 356790 318160 435520 442950 603580 661920 576450 543090 507600 486310 455750 459110 489530 415340 415980 466430 455580 550570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70713000 12165 2776 11507 23294 18707 18707 1 9606 Homo sapiens 0.011128416747169467 HQADACHAYQIIHR Unmodified 1718.806 0.80595542 2087 G3V4P5;G3V3Z4;G3V2T4;G3V4E4;B7Z4S8;Q6I9U9;Q53XC6;A8K669;Q99538-3;Q99538-2;Q99538 LGMN Legumain yes no 0 0 0 7 0.816 1 1 1 32.608 32.649 5 1.1514999999999999E-28 6370 20230619_1887_Aki_TMTPro18x_K_F7 200.76 184.36 24618 23315 31646 27725 40779 42663 37359 38597 41119 37136 42506 39026 38824 33552 34398 36715 44205 38884 22840 21372 31677 27843 41504 41918 37989 39650 41723 37674 43357 39359 39541 34959 35607 36963 42163 36929 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109240000 12166 2087 11508 23295;23296;23297 18708 18708 1 9606 Homo sapiens -0.024695319193597243 HQADIASYQEAIQQLDAELR Unmodified 2298.124 0.1240379 3438 P12036-2;P12036 NEFH Neurofilament heavy polypeptide yes no 0 0 0 5 0 1 61.992 62.04 3 4.9145E-23 18840 20230619_1885_Aki_TMTPro18x_K_F5 147.9 126.58 43030 37814 44921 41265 36590 40219 45725 42034 52393 46090 45730 45851 51048 43589 50175 50615 53689 49969 39822 34645 45328 41409 38907 40809 45784 42942 52720 46372 47477 46487 51898 45411 51230 50719 51310 47481 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187500000 12167 3438 11509 23298 18709 18709 1 9606 Homo sapiens 0.02690084236655821 HQAEMALNER Oxidation (M) 1213.551 0.55096951 1094 A0A0S2Z4E4;B2R6S4;A0A0S2Z4Y3;P16333;C9JAB9;P16333-2 NCK1 Cytoplasmic protein NCK1 yes no 0 1 0 2.5 0.5 1 1 28.868 28.96 3 0.015173 5345 20230619_1881_Aki_TMTPro18x_K_F2 62.338 36.865 8860.5 5861.7 5933.4 8105.3 14585 12481 13658 13372 10839 7992.2 10835 9687.8 11988 11077 11365 10472 12854 13347 8160.9 5389.2 6414 8054.6 14408 12313 13726 13450 11193 8420.7 11164 9819.7 12176 11349 11644 10698 12288 12645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29666000 12168 1094 11510 23299;23300 18710 18710 669 1 9606 Homo sapiens -0.047263933875683506 HQAEMALNER Unmodified 1197.5561 0.55605489 1094 A0A0S2Z4E4;B2R6S4;A0A0S2Z4Y3;P16333;C9JAB9;P16333-2 NCK1 Cytoplasmic protein NCK1 yes no 0 0 0 2 0 1 32.264 32.324 3 5.1201E-11 6621 20230619_1881_Aki_TMTPro18x_K_F2 139.31 118.44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12169 1094 11510 23301 18711 18711 1 9606 Homo sapiens -0.034820895249595196 HQAFEAELHANADR Unmodified 1607.7441 0.74406667 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 35.282 35.339 4 4.689E-22 7776 20230619_1881_Aki_TMTPro18x_K_F2 227.92 214.24 69187 42293 65392 69568 76065 71863 73611 71907 101610 82799 95576 88539 102080 88281 81930 92886 90995 92102 63845 38982 66911 68011 78061 72494 75219 73761 101630 83332 98549 89652 103030 91307 84227 93207 86983 87483 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 821380000 12170 1022;3868 11511 23302;23303 18712;18713 18712 2 9606 Homo sapiens -0.035495600668127736 HQAFEAELSANQSR Unmodified 1586.7437 0.74373232 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4 0.816 1 1 1 38.208 38.271 3 1.7002E-57 8767 20230619_1883_Aki_TMTPro18x_K_F4 260.97 246.28 130500 103640 144710 155030 174730 190910 183130 188390 193400 186140 199130 227200 232070 187360 188290 166560 220320 227560 120750 95300 146360 152750 179260 190200 184490 192540 196710 189460 205650 227230 233660 193600 193870 171230 210540 215470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 684120000 12171 1022;3868 11512 23304;23305;23306 18714;18715 18715 2 9606 Homo sapiens -0.026169797866486988 HQAFEAEVQANSGAIVK Unmodified 1797.901 0.90096124 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;B4DGT1;B4DTV8;A0A5F9ZHC3;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 5.5 0.5 1 1 47.174 47.252 3 6.7477E-19 12558 20230619_1885_Aki_TMTPro18x_K_F5 188.9 155.21 50907 43292 54884 54264 47153 54737 52058 55139 63844 68853 73724 68630 73205 59336 62638 78259 75438 78287 47115 39720 55301 53917 49748 55322 52611 56663 64787 68831 75103 69399 74214 62531 64675 78291 72075 74346 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 487980000 12172 1022;3868 11513 23307;23308 18716 18716 1 9606 Homo sapiens 0.03392680032834505 HQAFMAELASNK Unmodified 1345.6449 0.6448699 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1 0 1 46.906 46.906 3 0.0010715 13156 20230619_1880_Aki_TMTPro18x_K_F1 87.624 59.092 40163 38799 41349 39286 38047 48862 50489 46661 61950 47731 49818 49213 51522 44488 58442 59495 61196 61647 37189 35512 41860 39791 40177 48632 50519 47851 61925 48262 51777 49763 52878 46843 59463 59659 58528 58528 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 300220000 12173 2337;3778;3779 11514 23309 18717 18717 1 9606 Homo sapiens -0.01412674285279536 HQAFMAELASNK Oxidation (M) 1361.6398 0.63978452 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 1 0 7 0 1 40.582 40.65 3 0.027726 9513 20230619_1887_Aki_TMTPro18x_K_F7 55.467 41.805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12174 2337;3778;3779 11514 23310 18718 18718 1448 1 9606 Homo sapiens -0.026569781479111043 HQALQAEIAGHEPR Unmodified 1555.7855 0.78553755 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4 0 1 35.327 35.375 4 2.0389E-11 7643 20230619_1883_Aki_TMTPro18x_K_F4 170.74 142.53 29527 20361 28099 26444 32990 33715 30384 32339 43037 28277 37216 32290 36224 33291 33129 34217 40865 44001 27265 18704 28721 26306 33816 33511 31180 33013 42836 28955 38374 32668 36882 34362 34175 34914 39046 41677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 415980000 12175 1022;3868 11515 23311 18719 18719 1 9606 Homo sapiens 0.029876206924882354 HQALWDR Unmodified 924.4566 0.45659884 3256 Q53F51;O43427-2;O43427 FIBP Acidic fibroblast growth factor intracellular-binding protein yes no 0 0 0 5.5 0.5 1 1 34.61 34.677 3 0.0069529 7533 20230619_1886_Aki_TMTPro18x_K_F6 98.997 53.661 71593 56063 70351 79034 71201 79796 76503 81922 91940 87852 99892 98658 108340 93099 77761 91888 118480 105500 66173 51519 71633 77916 74062 80659 77340 83702 93096 88807 102430 99475 108890 96168 81924 93089 112880 100110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65879000 12176 3256 11516 23312;23313 18720;18721 18720 2 9606 Homo sapiens -0.008651193567288828 HQAQIDQYLGLVR Unmodified 1539.8158 0.81577505 2026 Q6IAX4;A8K3B9;Q16799-3;B7Z4K5;A8MT72;Q2NKQ5;Q16799-2;Q16799 RTN1 Reticulon;Reticulon-1 yes no 0 0 0 1.5 0.5 1 1 51.547 51.57 3 6.9146E-16 14963 20230619_1880_Aki_TMTPro18x_K_F1 209.67 186.44 130990 111150 138520 147000 139160 156130 160990 146350 181570 173380 175090 175730 194380 156470 170830 180980 192080 200830 121200 102040 140170 145610 145080 156950 161670 150970 183570 173880 180790 177620 196600 163420 175350 182560 183630 190500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2080899999.9999998 12177 2026 11517 23314;23315 18722;18723 18722 2 9606 Homo sapiens 0.06745979357674514 HQASINELK Unmodified 1038.5458 0.54580778 1013 B3KUB6;A0A0C4DH22;A0A1B0GTW6;Q9H4G0-4;Q9H4G0-3;Q9H4G0-2;Q9H4G0;B7Z653;X6RC15;H7C2K6 EPB41L1 Band 4.1-like protein 1 yes no 0 0 0 6 0 1 37.63 37.706 3 1.5497E-05 8617 20230619_1886_Aki_TMTPro18x_K_F6 144.65 104.58 34077 33058 39421 38514 35953 44000 36764 38031 42227 44138 46380 58935 45219 39951 45957 47538 65176 62688 31588 30295 39545 38526 37666 43937 37218 39436 42891 44715 47433 58457 46257 42243 47784 48489 62157 59390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22913000 12178 1013 11518 23316 18724 18724 1 9606 Homo sapiens 0.028076708121261618 HQCITAMK Oxidation (M) 1003.4579 0.45792075 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPX4;A0A8V8TRC7;A0A3B3ITD8;A0A024RCC4;H0YDA1;A0A8V8TRD0;A8KA17;A0A8V8TQG5;P52948-3;P52948-4;A0A1D8GZ56;A0A142I7X2;A0A1D8GZ64;A0A8V8TPX8;A0A1D8GZ55 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 1 0 7.5 0.5 1 1 31.65 31.701 3 0.0027664 6243 20230619_1888_Aki_TMTPro18x_K_F8 95.502 71.347 30218 20299 24776 28687 30241 26674 33705 30787 34823 32512 32800 27971 36033 30554 29898 33606 39991 30411 27869 18666 25722 28250 31026 27232 33804 31223 35334 32634 33855 28711 36392 31595 31082 33537 38100 28954 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35451000 12179 1852 11519 23317;23318 18725 18725 1182 1 9606 Homo sapiens -0.043669893744777255 HQDDLQDVIGR Unmodified 1294.6266 0.6265773 2876 G5EA19;U3KQS5;E5RG17;Q6P1N9;H0YBX2;E5RID7 TATDN1 Putative deoxyribonuclease TATDN1 yes no 0 0 0 2.5 0.5 1 1 41.426 41.496 3 2.3977E-12 10463 20230619_1881_Aki_TMTPro18x_K_F2 166.11 149.01 137460 113470 126530 143810 150560 169890 175090 176770 173290 172800 175080 165340 173670 140860 183350 187670 199720 180460 127030 104130 129940 143070 155140 169940 175040 179960 176740 174580 179480 167440 177730 148620 187190 187420 190800 171550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 358500000 12180 2876 11520 23319;23320 18726 18726 1 9606 Homo sapiens -0.008950929356615234 HQDPGDPGPGIR Unmodified 1244.5898 0.58979786 4247 Q8ND04-3;Q8ND04;Q8ND04-2 SMG8 Protein SMG8 yes no 0 0 0 2.5 0.5 1 1 29.745 29.826 3 1.0413E-05 5665 20230619_1881_Aki_TMTPro18x_K_F2 118.61 74.972 26378 20012 30413 32012 37198 41292 35276 39386 42976 25992 32445 30703 27025 28069 34679 28248 38339 29953 24410 18420 30673 31447 38049 40982 35921 39995 42862 27159 33551 30888 28164 29025 35291 28506 36589 28463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52257000 12181 4247 11521 23321;23322 18727 18727 1 9606 Homo sapiens -0.022713447615160476 HQDVPSQDDSKPTQR Unmodified 1736.8078 0.80778914 4586 Q9NRN7 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes yes 0 0 1 4 0.707 1 2 1 30.266 30.345 3;4 1.8638E-10 5708 20230619_1882_Aki_TMTPro18x_K_F3 160.47 147.05 47477 19176 49556 41906 56034 50583 46705 48470 60233 51282 58696 62575 66646 55903 53517 35478 72801 61441 43778 17797 50195 40546 57368 50431 48075 49731 60528 52043 60654 62713 67151 56847 55601 37505 69390 58123 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 391730000 12182 4586 11522 23323;23324;23325;23326 18728;18729 18728 2 9606 Homo sapiens -0.031142444204078856 HQEAEMAQNAVR Oxidation (M) 1398.631 0.63101075 209 A0A2R8Y804;B4DSW9;A0A2R8Y543;A0A2R8Y5C3;B4DL06;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y7Z0;B5BU28;A0A024R2Q3;A0A2R8Y5A3;P35222;A0A2R8Y6G0;A0A2R8Y815 CTNNB1 Catenin beta-1 yes no 0 1 0 3 0 1 28.104 28.215 3 0.026894 4931 20230619_1882_Aki_TMTPro18x_K_F3 48.659 34.753 2752.4 1442.9 1609.5 2085 1736.7 1635.7 1978.3 2650.4 3072.9 1870.7 2022.7 2047.5 2547.6 1073.8 1544.1 2812.6 2524.8 1936.8 2530.6 1328.9 1734.3 2047.1 1803.3 1711.1 2014.8 2615 3022.8 1937.6 2146.1 2040.8 2530 1235 1648.7 2745 2402.2 1851.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3895600 12183 209 11523 23327 18730 18730 128 1 9606 Homo sapiens -0.05235951784379722 HQEAEMAQNAVR Unmodified 1382.6361 0.63609612 209 A0A2R8Y804;B4DSW9;A0A2R8Y543;A0A2R8Y5C3;B4DL06;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y7Z0;B5BU28;A0A024R2Q3;A0A2R8Y5A3;P35222;A0A2R8Y6G0;A0A2R8Y815 CTNNB1 Catenin beta-1 yes no 0 0 0 3 0 1 32.224 32.303 3 3.5881E-25 6475 20230619_1882_Aki_TMTPro18x_K_F3 226.04 191.35 16622 14661 12656 14915 17236 19480 18188 17729 25269 19581 23286 20325 20661 17271 18869 20160 25026 18901 15347 13424 13271 15105 17593 19317 18492 18279 25237 19728 23845 20507 21090 18068 19563 20141 23843 17988 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69788000 12184 209 11523 23328 18731 18731 1 9606 Homo sapiens -0.03991647921748154 HQEGEIFDTEK Unmodified 1331.5994 0.59935949 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 RPL6 60S ribosomal protein L6 yes no 0 0 0 2.5 1.12 1 1 1 1 41.762 41.808 3 2.0753E-09 10599 20230619_1881_Aki_TMTPro18x_K_F2 186.36 152.49 746800 536250 638130 678260 742320 786070 676970 621290 867540 863340 872680 837880 959960 816250 735880 1019600 839600 761360 689190 492380 658950 674560 761420 783090 692240 652750 873640 859180 898400 851340 966340 853040 759520 1006200 801780 726170 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5724400000 12185 680 11524 23329;23330;23331;23332 18732;18733 18732 2 9606 Homo sapiens -0.05317621266635797 HQEHILR Unmodified 931.4988 0.49879801 2263 B2R8R5;Q13263;Q13263-2 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 4.5 0.5 1 1 23.02 23.087 3 0.0017793 3749 20230619_1883_Aki_TMTPro18x_K_F4 125.01 75.194 328850 244860 329960 335870 432650 429670 407270 406580 510180 381490 492260 433840 403400 367460 427840 356630 528450 428010 303910 224990 336630 332890 440340 426860 415230 416220 512600 388740 501640 435950 415970 380640 439730 362840 503950 406140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 284700000 12186 2263 11525 23333;23334 18734;18735 18734 2 9606 Homo sapiens 0.030308560516687066 HQELLQK Unmodified 894.49232 0.49231565 2374 B3KPD3;Q9NQS7-2;Q9NQS7 INCENP Inner centromere protein yes no 0 0 0 7 0 1 37.326 37.391 3 0.056694 8182 20230619_1887_Aki_TMTPro18x_K_F7 57.177 23.627 21823 14645 19124 17258 21197 22742 19774 22902 32691 22360 23782 22064 24306 18214 23082 22398 23252 26300 20136 13441 19668 17297 21844 22586 20421 23353 32186 22638 24826 22289 24718 19156 23499 22660 22267 24928 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29565000 12187 2374 11526 23335 18736 18736 1 9606 Homo sapiens 0.04084918100295454 HQEPVYSVAFSPDGR Unmodified 1687.7954 0.79543354 4477 Q9BZK7;C9JLJ1;B7Z475;A0A0D9SF63 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes no 0 0 0 4.5 0.5 1 1 44.68 44.741 3 9.2125E-08 11512 20230619_1885_Aki_TMTPro18x_K_F5 131.56 124.01 254330 200240 254440 235120 279060 328040 307130 311900 345350 222740 235920 208200 234890 189710 235380 222530 250360 190500 235120 183660 258770 235900 288830 324210 309160 317240 344900 229660 247020 211590 239780 198050 240060 221380 238980 181490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 304560000 12188 4477 11527 23336;23337 18737;18738 18738 2 9606 Homo sapiens -0.020952360927822156 HQETMTPAGLSFFQCR Oxidation (M) 1924.856 0.85600166 2259 B2R894;Q96DV4;Q96DV4-2 MRPL38 39S ribosomal protein L38, mitochondrial yes no 0 1 0 1 0 1 48.95 48.95 3 1.1256E-09 13929 20230619_1880_Aki_TMTPro18x_K_F1 140.03 134.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12189 2259 11528 23338 18739 18739 1404 1 9606 Homo sapiens -0.06943210096369512 HQEYLNSILQHAK Unmodified 1579.8107 0.81068967 1348;1872 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A994J4Z2;A0A2R8Y4C5;Q59FZ6;A0A2R8YGP5;A5D6X0;A0A994J4Z7;P51531-2;P51531;B4DK35;A0A0U1RQZ9;F6VDE0;A0A994HRU5 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 0 2 0 1 46.861 46.937 4 2.7363E-15 13034 20230619_1881_Aki_TMTPro18x_K_F2 194.86 175.57 215320 188490 202770 255270 216500 244050 225270 227350 233560 221530 219530 172780 187440 169670 209770 206480 219640 179830 199090 173070 207550 252030 224070 247210 226930 233320 236910 222740 224250 177690 193480 177030 213430 205450 209780 171230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111050000 12190 1348;1872 11529 23339 18740 18740 1 9606 Homo sapiens 0.043976754950790564 HQFGNEIK Unmodified 971.48248 0.48247924 2494 Q5FBZ4;B7ZAA0;B4DIH7;P54277-4;P54277-2;P54277-3;P54277 PMS1 PMS1 protein homolog 1 yes no 0 0 0 6.5 0.5 1 1 36.974 37.041 3 0.00070204 8345 20230619_1886_Aki_TMTPro18x_K_F6 112.8 63.379 42266 33331 42053 38402 51154 52216 46235 46232 55982 48706 52799 47055 52489 42903 45599 60330 62827 52487 39072 30565 42844 38562 52262 51633 47208 47694 56343 49063 54261 47756 53264 45312 47518 59862 59874 49974 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42249000 12191 2494 11530 23340;23341 18741 18741 1 9606 Homo sapiens -0.004402699050956471 HQFGTDK Unmodified 831.38752 0.38751622 3342 Q0P607;O95104-2;O95104-3;O95104 SFRS15;SCAF4 Splicing factor, arginine/serine-rich 15 yes no 0 0 0 5.5 0.5 1 1 32.963 33.022 3 0.004361 6899 20230619_1886_Aki_TMTPro18x_K_F6 103.35 50.951 52132 34386 56118 60168 81812 78722 67163 77321 67167 56620 87505 83087 66460 66646 74350 49498 87356 84924 48177 31709 57071 58846 82436 78141 68614 78502 69159 59128 87888 82590 68938 68373 76041 52088 83439 80295 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76416000 12192 3342 11531 23342;23343 18742 18742 1 9606 Homo sapiens -0.034922033762882165 HQGGWTDGGSGGGGGYQDGGYR Unmodified 2124.8634 0.86340654 3120 I6L9E8;Q8NCA5;B4DY25;B4DT23;B3KTW4 FAM98A Protein FAM98A yes no 0 0 0 3 0 1 36.51 36.565 3 1.6245E-07 8191 20230619_1882_Aki_TMTPro18x_K_F3 103.31 92.495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12193 3120 11532 23344 18743 18743 1 9606 Homo sapiens -0.1540306297074494 HQGTFTDEK Unmodified 1061.4778 0.47778779 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 0 3.5 0.5 1 1 33.783 33.843 3 1.654E-08 7123 20230619_1882_Aki_TMTPro18x_K_F3 185.33 147.52 84284 47425 107620 101940 131290 126230 97418 109540 123750 97570 144160 134010 117950 100930 116790 61588 125120 100060 77961 43909 107660 98694 133420 125370 101100 112720 125260 100390 145720 133200 121140 103150 118920 64892 119460 94725 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 126240000 12194 4016 11533 23345;23346 18744;18745 18744 2 9606 Homo sapiens -0.050491988385147124 HQGVMVGMGQK 2 Oxidation (M) 1202.5536 0.55361205 3112;3679;2695;3167 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;A6NL76;B3KW67;Q7Z7J6;Q13707;B7Z6I1;F6QUT6;F6UVQ4;C9JFL5;B8ZZJ2;F8WB63;P63261;I3L4N8;Q8WVW5;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;J3KT65;I3L3R2;A1E282;Q562R1;K7EM38;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;E7EVS6;A0A2R8Y793;B3KUD3;A0A2R8YGF8;A0A6Q8PH58;G5E9R0;C9JZR7;C9JUM1;C9JTX5 ACTA1;ACTC1;ACTA2;ACTG2;ACTG1;ACTBL2;ACTB;PS1TP5BP1 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 2 0 4.21 2.62 2 4 1 1 1 1 1 3 32.487 32.533 3 5.9409E-05 6477 20230619_1880_Aki_TMTPro18x_K_F1 121.61 102.29 1329600 947060 1296200 1376100 1699600 1856100 1697700 1542400 2041900 1517600 1667400 1472500 1759100 1373600 1425200 1400700 1894400 1589500 1228200 870940 1326200 1359900 1733700 1832700 1721500 1596800 2044300 1535300 1730700 1494000 1776400 1422700 1480700 1418000 1805900 1508900 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 14 13586000000 12195 2695;3112;3167;3679 11534 23347;23348;23349;23350;23351;23352;23353;23354;23355;23356;23357;23358;23359;23360 18746;18747;18748;18749;18750;18751;18752;18753;18754;18755;18756;18757;18758;18759;18760;18761 18746 1616;1617 16 9606 Homo sapiens -0.0395626125423405 HQGVMVGMGQK Oxidation (M) 1186.5587 0.55869743 3112;3679;2695;3167 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;A6NL76;B3KW67;Q7Z7J6;Q13707;B7Z6I1;F6QUT6;F6UVQ4;C9JFL5;B8ZZJ2;F8WB63;P63261;I3L4N8;Q8WVW5;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;J3KT65;I3L3R2;A1E282;Q562R1;K7EM38;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;E7EVS6;A0A2R8Y793;B3KUD3;A0A2R8YGF8;A0A6Q8PH58;G5E9R0;C9JZR7;C9JUM1;C9JTX5 ACTA1;ACTC1;ACTA2;ACTG2;ACTG1;ACTBL2;ACTB;PS1TP5BP1 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 1 0 3.84 2.7 3 7 2 1 2 4 35.426 35.465 3 5.3409E-07 7419 20230619_1880_Aki_TMTPro18x_K_F1 164.48 147.56 2081900 1533900 1939400 2050900 2675500 2914900 2575400 2491700 3099100 2360300 2419800 2211600 2665300 2027000 2312700 2356200 2614200 2128300 1922800 1409100 1993900 2039300 2718800 2871800 2617400 2570500 3099100 2389900 2523900 2246600 2694600 2115400 2374500 2350000 2495000 2025600 17 17 17 17 17 17 17 17 17 17 17 17 17 17 17 17 17 17 29043000000 12196 2695;3112;3167;3679 11534 23361;23362;23363;23364;23365;23366;23367;23368;23369;23370;23371;23372;23373;23374;23375;23376;23377;23378;23379 18762;18763;18764;18765;18766;18767;18768;18769;18770;18771;18772;18773;18774;18775;18776;18777;18778;18779;18780 18762 1616;1617 19 9606 Homo sapiens -0.027119573916479567 HQGVMVGMGQK Unmodified 1170.5638 0.5637828 3112;3679;2695;3167 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;A6NL76;B3KW67;Q7Z7J6;Q13707;B7Z6I1;F6QUT6;F6UVQ4;C9JFL5;B8ZZJ2;F8WB63;P63261;I3L4N8;Q8WVW5;B4E3A4;B4DVQ0;I3L3I0;I3L1U9;J3KT65;I3L3R2;A1E282;Q562R1;K7EM38;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;E7EVS6;A0A2R8Y793;B3KUD3;A0A2R8YGF8;A0A6Q8PH58;G5E9R0;C9JZR7;C9JUM1;C9JTX5 ACTA1;ACTC1;ACTA2;ACTG2;ACTG1;ACTBL2;ACTB;PS1TP5BP1 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 0 0 3.5 2.69 1 1 1 1 38.816 38.843 3 2.6885E-12 9553 20230619_1880_Aki_TMTPro18x_K_F1 195.27 176.49 3814200 2524800 2845500 2923600 3768800 4544300 3719500 3734000 4879600 3733200 3366000 3284100 4533100 3281900 3300200 3753500 3698600 3096600 3515300 2317100 2986100 2941100 3847900 4452600 3786900 3868500 4844400 3763100 3574100 3354700 4527700 3412600 3401600 3727000 3530800 2950300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 23353000000 12197 2695;3112;3167;3679 11534 23380;23381;23382;23383 18781;18782;18783;18784 18781 4 9606 Homo sapiens -0.014676535290163883 HQIEEELDRR Unmodified 1323.6531 0.6531264 1706 D3DVR8;A0A7P0TA78;A0A7P0TAC5;P42858;A8K3C9 HD;HTT Huntingtin yes no 0 0 1 1.5 0.5 1 1 34.938 34.967 4 6.0085E-07 7664 20230619_1881_Aki_TMTPro18x_K_F2 147.75 98.773 30325 24481 30165 28754 33591 29237 31203 31920 38998 34114 43012 40535 35766 34102 34804 40395 49037 42937 28037 22451 30686 28710 34506 29617 31854 32484 39418 34559 43603 40662 36728 35704 36222 40619 46739 40777 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48720000 12198 1706 11535 23384;23385 18785 18785 1 9606 Homo sapiens 0.004245959557010792 HQIGNTLIR Unmodified 1050.5934 0.59342667 4218 Q8IZ21-3;Q8IZ21;Q8IZ21-2 PHACTR4 Phosphatase and actin regulator 4 yes no 0 0 0 2 0 1 34.674 34.731 3 0.00019364 7562 20230619_1881_Aki_TMTPro18x_K_F2 110.76 64.628 33793 25935 33402 38037 36577 40825 38349 41017 43309 43215 44026 47141 47411 39197 39138 44837 52597 51712 31232 23846 34040 37439 37796 41060 38728 41943 43883 43669 45299 47395 47893 41009 40716 45334 50188 49047 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48483000 12199 4218 11536 23386 18786 18786 1 9606 Homo sapiens 0.07015369802979876 HQKPVLTGQR Unmodified 1162.6571 0.65708956 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;Q75MG1;E7EMS9;E9PFE3;B7Z6N5;C9JF98;F8WDX8;Q9Y6E2-2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 1 3.5 0.5 1 1 30.268 30.348 4 2.4229E-05 5678 20230619_1883_Aki_TMTPro18x_K_F4 152.54 144.61 83705 80090 80055 68557 127660 144080 112970 112250 169490 11901 11724 10552 9016 6221.8 32334 7886.5 12040 7229.9 77454 73215 82292 71244 128580 139250 116330 114120 162670 17700 19367 10714 10453 6655.5 31211 7941.4 11683 6891.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176930000 12200 607 11537 23387;23388 18787 18787 1 9606 Homo sapiens 0.0822673024008509 HQLDHVFK Unmodified 1022.5298 0.52976379 1549 A0A494C0R8;K7EIG1;O75153 CLUH Clustered mitochondria protein homolog yes no 0 0 0 7.5 0.5 1 1 38.888 38.913 4 0.003012 9041 20230619_1888_Aki_TMTPro18x_K_F8 99.442 71.233 210120 146980 176380 186110 180160 159440 191720 176000 216530 245400 221880 191550 268840 193760 161110 320640 262530 201520 193850 134970 182030 184420 186940 163770 193420 180570 219660 242630 229100 197270 267640 206520 172190 313020 249780 192900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 95465000 12201 1549 11538 23389;23390 18788;18789;18790 18790 3 9606 Homo sapiens 0.019400093658987316 HQLEDLR Unmodified 909.46683 0.46682918 4210 Q8IXT5;B9ZVT1 RBM12B RNA-binding protein 12B yes no 0 0 0 2.5 0.5 1 1 33.442 33.504 3 0.0051263 6951 20230619_1882_Aki_TMTPro18x_K_F3 102.72 21.085 45125 37720 43679 45373 52597 55254 53529 58714 64545 45977 61029 57048 62782 51174 55515 50629 61111 57759 41720 34595 44635 45335 53945 55205 54266 59381 64912 47512 62825 57244 63660 52966 56858 51310 58393 54797 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81158000 12202 4210 11539 23391;23392 18791 18791 1 9606 Homo sapiens 0.008474435778566658 HQLEEELR Unmodified 1052.5251 0.52507234 4088 Q643R0;Q9ULW0;Q9ULW0-2;B3KM90;Q96FC3 HCTP4;TPX2 Targeting protein for Xklp2 yes no 0 0 0 1.5 0.5 1 1 35.667 35.695 3 0.00022514 8253 20230619_1880_Aki_TMTPro18x_K_F1 139.74 92.137 66373 46020 70539 69768 72356 78499 68570 72044 89329 84173 105090 85375 91134 77622 104450 74278 114060 70025 61347 42348 71321 68599 74925 78547 70046 74360 90408 84478 106350 86392 94087 80140 106320 74582 108740 66717 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137590000 12203 4088 11540 23393;23394 18792;18793 18792 2 9606 Homo sapiens 0.0009108043248033937 HQLEIFDALGSQACSNK Unmodified 1916.9051 0.90506034 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;A0A669KB06 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 0 7 0 1 55.389 55.45 3 0.0082309 15944 20230619_1887_Aki_TMTPro18x_K_F7 64.275 54.218 39401 30780 38243 37137 28897 38508 38376 34663 46699 42824 44396 49487 49274 43129 49218 58152 52771 60448 36414 28239 38805 37009 31075 38736 38406 35917 47000 43061 45917 49728 50147 45487 50298 58293 50510 57361 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124890000 12204 1566 11541 23395 18794 18794 1 9606 Homo sapiens -0.016715985357222962 HQLVHTGEK Unmodified 1047.5461 0.54614213 3502 P25490;A0A994J726;O15391 YY1;YY2 Transcriptional repressor protein YY1;Transcription factor YY2 yes no 0 0 0 6 0 1 29.138 29.169 3 0.01245 5495 20230619_1886_Aki_TMTPro18x_K_F6 60.518 24.094 12489 21187 20236 16093 16321 30953 19894 18566 16186 15863 15608 16646 12482 13463 26307 7294.6 29536 16279 11684 19325 19846 16886 17427 29873 19747 19745 16676 16208 15944 16729 13524 13669 26571 7995.8 28137 15415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7894100 12205 3502 11542 23396 18795 18795 1 9606 Homo sapiens 0.024270905319781377 HQNVQLPR Unmodified 990.53591 0.5359118 1159;1980 P26599;P26599-2;A0A0U1RRM4;P26599-1;A0A7I2V621;A0A0D9SF20;K7EK45;A0A087WUW5;A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 no no 0 0 0 4.8 2.79 1 1 1 1 1 30.616 30.658 3 6.4719E-05 6228 20230619_1880_Aki_TMTPro18x_K_F1 151.27 112.12 141980 124140 165040 163580 234670 208920 192110 239370 202190 138630 201390 208790 168630 169440 207800 147330 235080 187690 131510 113950 166710 162590 236620 208580 196620 239580 205120 147630 205380 207480 175220 174790 211760 150900 224330 178020 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 2814500000 12206 1159;1980 11543 23397;23398;23399;23400;23401 18796;18797;18798;18799;18800 18796 5 9606 Homo sapiens 0.04026527597409313 HQPTAIIAK Unmodified 977.56581 0.56581494 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B4DVU1;E9PFF2;A0A0S2Z5C0 HEL107;TKT Transketolase yes no 0 0 0 1.5 0.5 1 1 38.18 38.212 3 0.00044843 9262 20230619_1880_Aki_TMTPro18x_K_F1 114.4 100.63 319580 214360 261480 293350 323780 355860 288730 316940 742100 369340 362800 391400 387260 360570 341270 501300 534920 448030 294730 197050 271540 290470 331590 354160 306760 327770 714040 372150 391090 395460 392980 380150 359370 498010 509330 426420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1011399999.9999999 12207 3523 11544 23402;23403 18801;18802 18801 2 9606 Homo sapiens 0.07613466542750302 HQQLLEEK Unmodified 1023.5349 0.53490874 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 0 3.5 0.5 1 1 37.217 37.265 3 0.00055501 8471 20230619_1882_Aki_TMTPro18x_K_F3 134.26 62.03 46910 40696 44562 42113 54815 54297 48285 58249 66049 55145 64517 65210 71804 57071 55417 64653 86235 68673 43375 37269 45591 42612 55939 54102 49640 59105 66197 56216 66566 65485 72281 59558 58380 65049 82090 65247 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209190000 12208 3549 11545 23404;23405 18803 18803 1 9606 Homo sapiens 0.02408268437852712 HQQQLLASPGSSTVDNK Unmodified 1808.9017 0.90168952 3818 Q86VC1;Q8IVQ8;Q0VG75;Q9C0E2 XPO4 Exportin-4 yes no 0 0 0 6.5 0.5 1 1 40.057 40.122 3 8.4113E-09 9293 20230619_1887_Aki_TMTPro18x_K_F7 121.32 101.61 15992 12782 14075 18630 21360 17229 19542 18549 20507 17690 19257 25117 19360 19658 19827 22257 22661 22146 14770 11750 14588 18304 21513 17570 19831 18848 20785 18149 19867 24960 19804 20572 20323 22314 21651 21037 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22628000 12209 3818 11546 23406;23407 18804;18805 18805 2 9606 Homo sapiens 0.029594746818929707 HQQTITIPAR Unmodified 1163.6411 0.64110515 2796 CON__Q2UVX4 yes yes 0 0 0 1 0 1 34.173 34.173 3 0.00038143 7656 20230619_1880_Aki_TMTPro18x_K_F1 92.611 37.241 + 35433 19458 34458 36879 57319 51398 45137 46243 58687 35366 47429 44121 46477 37684 38546 29385 49887 37689 32689 17981 35429 35968 57332 50749 46617 47296 58495 36640 49114 44176 47087 38661 39902 30169 47537 35754 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16050000 12210 2796 11547 23408 18806 18806 1 0.06583024003180071 HQTEDDFQR Unmodified 1174.5003 0.50031415 2284 B4DSK7;B2RAG9;Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 yes no 0 0 0 1 0 1 28.157 28.157 3 0.00028696 5279 20230619_1880_Aki_TMTPro18x_K_F1 119.75 89.492 8561.1 6930.4 7970.6 10915 10421 11838 9212.5 6525.6 12500 10503 10312 11009 9757.8 10563 8589 7893.3 15806 10859 7911.2 6376.4 8200.3 10691 10609 11776 9451.7 7154.5 12459 10431 10661 11123 9946.5 10764 9145.5 8145.9 15019 10300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6414600 12211 2284 11548 23409 18807 18807 1 9606 Homo sapiens -0.07995599440914702 HQVEQLSSSLK Unmodified 1254.6568 0.65681479 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 7.5 0.5 1 1 42.535 42.574 3 1.4969E-06 10514 20230619_1888_Aki_TMTPro18x_K_F8 158.06 144.63 64421 51663 62808 70414 79257 84271 74820 69080 83042 79351 90863 82767 81244 73565 72670 84468 87193 74190 59548 47453 64227 69715 80885 83813 75945 71917 84434 79774 92370 83589 82852 76723 74910 84112 83195 70622 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 543060000 12212 349;3906 11549 23410;23411 18808 18808 1 9606 Homo sapiens 0.03967265729556857 HQVIQTVHPVEK Unmodified 1413.7728 0.7728476 1600 Q6DHZ8;B2RBM8;A0A669KBJ7;Q9H2P0;A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein yes no 0 0 0 7.5 0.5 1 1 36.08 36.107 4 9.0698E-10 7765 20230619_1887_Aki_TMTPro18x_K_F7 182.02 154.9 103360 84160 113440 115510 103340 125820 129450 113280 134440 123920 148220 131340 135870 111720 107650 134770 149300 138760 95650 77303 114290 114180 108880 126100 129160 116940 137130 124920 150730 132410 137720 117130 112410 135210 142370 131790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 277680000 12213 1600 11550 23412;23413 18809;18810 18809 2 9606 Homo sapiens 0.08251209300260598 HQVQLLGR Unmodified 949.54575 0.5457482 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8;A0A8V8TQ76;A0A8V8TRI2 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 0 0 2 0 1 34.589 34.646 3 0.00052209 7542 20230619_1881_Aki_TMTPro18x_K_F2 136.11 78.832 40492 31695 43851 52384 41142 52737 47873 46661 74237 48510 54201 58379 51956 47361 49119 52748 62533 60476 37457 29183 44287 51160 43227 53115 48676 48165 73236 49289 56473 58429 53011 49492 50756 53345 59687 57366 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51363000 12214 117 11551 23414 18811 18811 1 9606 Homo sapiens 0.06895715602820474 HQVSVEGTNQTDVK Unmodified 1540.7481 0.74814899 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;A0A1U9XBD9;A0A1U9XBC3;Q14676-3;B4DYH4;Q14676-4 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 0 4 0 1 35.656 35.704 3 1.1236E-11 7809 20230619_1883_Aki_TMTPro18x_K_F4 174.95 151.24 30003 18272 30005 28834 31629 28207 28031 29009 41861 31854 34173 36014 40775 35622 29837 33490 44853 39124 27699 16833 30483 28238 32603 28596 28906 29660 41538 32195 35707 36348 40910 36649 31376 33999 42730 37121 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42000000 12215 1308 11552 23415 18812 18812 1 9606 Homo sapiens -0.000595153637959811 HQYQEEMIQR Oxidation (M) 1376.6143 0.61429805 4106 Q6GQQ9-2;Q6GQQ9 OTUD7B OTU domain-containing protein 7B yes no 0 1 0 2 0 1 29.121 29.193 3 0.071828 5429 20230619_1881_Aki_TMTPro18x_K_F2 45.307 28.086 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12216 4106 11553 23416 18813 18813 2670 1 9606 Homo sapiens -0.05894452670327155 HQYTQTAILYEK Unmodified 1493.7514 0.75144346 1444 B4DWK2;B3KNL6;B3KP06;A0A384MTS3;O75815-2;O75815-3;O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 yes no 0 0 0 8 0 1 44.981 45.009 3 0.012266 11486 20230619_1888_Aki_TMTPro18x_K_F8 62.088 46.197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12217 1444 11554 23417 18814 18814 1 9606 Homo sapiens 0.024317794808894178 HQYYNLK Unmodified 964.47667 0.47666558 777 A0A024RDU9;P13984 GTF2F2 General transcription factor IIF subunit 2 yes no 0 0 0 2 0 1 38.53 38.593 3 0.0073597 9185 20230619_1881_Aki_TMTPro18x_K_F2 97.068 66.901 60590 46547 56179 56887 65218 75664 73278 78766 91863 62405 70462 72879 64873 55678 71233 56103 80284 66991 55971 42712 57591 56862 67307 75135 73974 79777 91566 64299 73089 72906 66714 58030 72729 57039 76635 63562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37421000 12218 777 11555 23418 18815 18815 1 9606 Homo sapiens -0.006993684167696301 HQYYNQEWTLWDR Unmodified 1837.8172 0.81723161 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 7 0 1 52.593 52.663 3 0.0030656 14767 20230619_1887_Aki_TMTPro18x_K_F7 80.815 71.066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12219 134 11556 23419 18816 18816 1 9606 Homo sapiens -0.06816431344236662 HRDFVAEPMGEK Oxidation (M) 1430.6612 0.66124824 340 A0A024R5H0;O75531;E9PJJ8 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed yes no 0 1 1 4.29 1.03 2 2 2 1 34.174 34.24 3;4 0.0024405 7421 20230619_1885_Aki_TMTPro18x_K_F5 93.766 80.844 94625 56470 79354 103310 99745 103590 109010 118010 147630 113890 123660 177470 192960 192050 100910 266430 236760 285100 87233 52133 82336 100400 102290 105000 110540 119460 147220 117360 131280 177930 190750 201420 112670 267020 225550 270420 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 792270000 12220 340 11557 23420;23421;23422;23423;23424;23425;23426 18817;18818;18819;18820 18820 200 4 9606 Homo sapiens -0.036855931192121716 HRDFVAEPMGEK Unmodified 1414.6663 0.66633362 340 A0A024R5H0;O75531;E9PJJ8 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed yes no 0 0 1 4.5 0.5 1 1 37.858 37.926 4 3.301E-05 8667 20230619_1885_Aki_TMTPro18x_K_F5 131.32 101.78 167700 101730 118960 156850 129420 162550 155650 176850 235150 197000 207090 341940 391870 357630 149890 551090 474350 607980 154440 93692 125320 153850 134750 164140 157860 180240 234000 202580 222470 341380 383200 378500 176840 552450 451640 576370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 535280000 12221 340 11557 23427;23428 18821;18822 18822 2 9606 Homo sapiens -0.024412892566033406 HRDGDVVLPAGVVVK Unmodified 1559.8784 0.87837531 2192 B4DLV6;B1AK66;Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 yes no 0 0 1 8 0 1 45.256 45.284 4 0.0011573 11622 20230619_1888_Aki_TMTPro18x_K_F8 86.39 79.536 32938 28273 31120 38249 31375 38938 37704 34774 43967 38076 36260 35861 42953 34331 31687 47594 39363 39776 30452 25960 31819 37796 32783 39210 37830 35919 44124 38258 37845 36478 43086 36166 32933 47129 37591 37861 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56985000 12222 2192 11558 23429 18823 18823 1 9606 Homo sapiens 0.12083125425851904 HRDLEER Unmodified 953.46789 0.46789181 3342 Q0P607;O95104-2;O95104-3;O95104 SFRS15;SCAF4 Splicing factor, arginine/serine-rich 15 yes no 0 0 1 1 0 1 23.017 23.017 3 0.022131 3743 20230619_1880_Aki_TMTPro18x_K_F1 77.072 18.786 30616 15766 36891 41069 52435 43218 41849 48736 45114 31507 54739 54794 38157 39690 46252 20553 54381 45140 28293 14658 37193 39377 52815 43649 42940 48943 46075 33470 54995 54028 39903 40412 47188 22432 51889 42648 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21574000 12223 3342 11559 23430 18824 18824 1 9606 Homo sapiens -0.01070342053242257 HRDPELK Unmodified 893.47191 0.47191456 2566 B4DPK2;Q9NVH1-3;Q9NVH1;Q9NVH1-2;Q9UMU8;B1AK20;Q5TH61;A0A8I5KXQ7;A0A8I5QJB4 DNAJC11 DnaJ homolog subfamily C member 11 yes no 0 0 1 4 0 1 27.963 28.035 3 0.08882 4897 20230619_1883_Aki_TMTPro18x_K_F4 50.607 27.777 8610.5 4386.3 8819.2 9181.3 11914 10166 10313 11609 13662 5937.8 14523 10650 10768 8782 14287 5779 14980 13383 7944.7 4061.6 8986.3 8884.9 12068 10236 10598 11608 13718 6459.5 14674 10553 11273 8972.9 14456 6307.8 14315 12637 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3252800 12224 2566 11560 23431 18825 18825 1 9606 Homo sapiens 0.020917474404654968 HRDYETATLSDIK Unmodified 1547.758 0.7579854 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;B4E337 ACTN4 Alpha-actinin-4 yes no 0 0 1 5 0 1 41.22 41.306 3 3.7058E-06 10092 20230619_1885_Aki_TMTPro18x_K_F5 135.14 77.097 94551 76389 89206 101860 98104 95166 113300 108770 115050 111630 136370 111620 129770 101190 106500 120450 138590 126490 87381 70145 91270 100680 101480 97076 113410 110280 117910 112650 138430 113080 131500 105810 110550 121030 132210 120120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91647000 12225 1069 11561 23432 18826 18826 1 9606 Homo sapiens 0.006016726415964513 HRELFLSR Unmodified 1056.5829 0.58286199 317;2900;2897 A0A024R534;O94776;E9PCS8;E7EQY4;E7EV10;Q9BTC8-2;Q9BTC8;F6RRE2;Q53RX8;E7ESY4;Q13330-3;Q13330;A0A024R6P5;Q13330-2;Q86TR6 MTA2;MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 no no 0 0 1 2.5 0.5 1 1 32.577 32.643 3 0.05908 6741 20230619_1881_Aki_TMTPro18x_K_F2 51.445 12.423 57110 44607 76653 62150 84721 89804 74323 87527 81960 43192 63479 71550 54229 46412 67751 27727 72982 61669 52943 40986 76265 61708 87003 88632 75834 88341 82181 46920 65684 70444 56296 47746 68711 30200 69700 58255 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12320000 12226 317;2897;2900 11562 23433;23434 18827 18827 1 9606 Homo sapiens 0.056833871485423515 HRELYLR Unmodified 985.54575 0.5457482 3075 H3BS72;Q9P035;Q9P035-2 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 0 0 1 1 0 1 29.147 29.147 3 0.0067213 5650 20230619_1880_Aki_TMTPro18x_K_F1 108.46 41.429 36111 27824 34215 29079 42918 39695 38476 37736 41201 17674 22589 21175 14443 16277 29561 15665 22677 16441 33365 25495 35003 29431 43714 39316 39128 38147 40996 19081 23719 21187 15749 16898 29334 15844 21721 15631 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13497000 12227 3075 11563 23435 18828 18828 1 9606 Homo sapiens 0.0523971560278369 HRFEVNPVWK Unmodified 1310.6884 0.68838969 3468 P17812;A0A3B3IRI2;B4E1E0;P17812-2 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 1 3 0 1 44.218 44.291 4 0.006719 11494 20230619_1882_Aki_TMTPro18x_K_F3 79.201 37.222 163320 117940 141460 144500 111800 128440 144420 136700 140330 144190 127930 122890 150540 122900 132700 156850 154370 170220 150740 108250 145090 143580 119400 131290 143640 139340 142780 144660 132820 125770 152070 128660 136590 157740 147600 161480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128640000 12228 3468 11564 23436 18829 18829 1 9606 Homo sapiens 0.045473032741710995 HRGQAAQPEPSTGFTATPPAPDSPQEPLVLR Unmodified 3251.6323 0.63233796 907 C9JE12;C9JCW7;A0A090N8Q3;A0A590UJA9;Q9BVT8 TMUB1;C7orf21 Transmembrane and ubiquitin-like domain-containing protein 1 yes no 0 0 1 6 0 1 47.086 47.167 4 3.811E-10 12691 20230619_1886_Aki_TMTPro18x_K_F6 112.99 105.54 6683 4539.8 5330 6502 6070.8 4173.6 5432.3 5862.4 4723.7 5528.1 6777.6 6741.7 6803.4 6580.5 5448.5 8824.8 7945.5 6316.9 6162.7 4175.1 5540.6 6373.7 6211.1 4441.8 5497.8 5866.8 4937.8 5637.6 6857.2 6792 6885.8 6902.5 5720.3 8682.4 7566.7 6032.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32382000 12229 907 11565 23437 18830 18830 1 9606 Homo sapiens 0.09658708573806507 HRPDLIDFDK Unmodified 1254.6357 0.63568542 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;A0A024R674;P11277-2;P11277;P11277-3;Q59FP5;B2RMN7;Q01082-2;Q01082-3 SPTBN1;SPTB Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, erythrocytic no no 0 0 1 5 0.816 1 1 1 44.331 44.403 4 0.0011592 11364 20230619_1885_Aki_TMTPro18x_K_F5 103.34 60.315 437890 366480 409470 465110 445480 516000 530700 518660 615020 561130 554240 585250 609260 525770 541540 653760 641170 671030 404750 336300 419300 462230 462470 517890 532620 530820 619310 565670 574130 591070 617040 551080 557990 655530 612710 637050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 492880000 12230 2337;3778;3779 11566 23438;23439;23440 18831;18832 18831 2 9606 Homo sapiens 0.01855300420720596 HRPEDVVQFLVSK Unmodified 1552.8362 0.83617614 2978 F6TR53;Q9H7U7;Q53T59;B5MC96 HS1BP3 HCLS1-binding protein 3 yes no 0 0 1 2 0 1 54.608 54.632 4 0.0007464 16403 20230619_1881_Aki_TMTPro18x_K_F2 94.551 63.324 29935 27443 29953 29837 26319 29452 27043 29206 37651 37647 33477 37232 39979 34346 39185 39884 41464 44475 27701 25138 30365 29947 27668 29819 27570 30076 37615 37587 34859 37699 40566 35827 39989 40246 39671 42183 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63432000 12231 2978 11567 23441 18833 18833 1 9606 Homo sapiens 0.08187150017511158 HRPELIDYGK Unmodified 1226.6408 0.6407708 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;G3V2N5;A0A804HJQ9;G3V2W4;B4DRP5;A0A804HJN7;G3V2X9 ACTN1 Alpha-actinin-1 yes no 0 0 1 6.5 0.5 1 1 38.811 38.884 4 0.0012688 8776 20230619_1887_Aki_TMTPro18x_K_F7 100.88 71.579 153520 116930 140530 119950 125920 127900 165490 158610 195940 189300 182870 181420 231050 172740 175690 214640 198300 190600 141800 107130 143490 121160 132980 129530 165490 160700 197410 189440 190290 184280 231500 180780 181080 213580 189460 181320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 837460000 12232 387 11568 23442;23443 18834 18834 1 9606 Homo sapiens 0.0365160428332274 HRPSEADEEELAR Unmodified 1537.7121 0.71209784 1855 A0A8V8TQW4;O14617-4;O14617;O14617-5;O14617-2;Q6PK82;O14617-3 AP3D1 AP-3 complex subunit delta-1 yes no 0 0 1 1.5 0.5 1 1 29.584 29.62 4 1.7327E-10 5838 20230619_1880_Aki_TMTPro18x_K_F1 174.73 143.55 36562 30764 30818 31475 32412 35511 31346 34564 39510 43144 45504 46692 47848 41782 35828 44733 46679 44539 33770 28174 31806 31801 33539 35599 31942 35593 40052 43245 46497 47060 48199 43410 37290 44875 44542 42314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87717000 12233 1855 11569 23444;23445 18835 18835 1 9606 Homo sapiens -0.03524972540640192 HRPVEPERR Unmodified 1174.6319 0.63193745 2073 A8K5D5;P49406;A0A0A0MRF4 MRPL19 39S ribosomal protein L19, mitochondrial yes no 0 0 2 6 0 1 22.968 23.009 3 0.018196 3765 20230619_1886_Aki_TMTPro18x_K_F6 64.711 36.313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12234 2073 11570 23446 18836 18836 1 9606 Homo sapiens 0.05160675437491591 HSAEAIALEQSR Unmodified 1310.6579 0.65787742 726 A0A0G2JIS2;A0A1U9X7P8;A0A024RCN9;Q96KQ7-2;Q96KQ7;A0A0G2JRR0;A0A0G2JRN8;Q59FM7;B7Z852;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes no 0 0 0 3.5 0.5 1 1 35.614 35.666 3 3.1571E-10 7855 20230619_1882_Aki_TMTPro18x_K_F3 187.93 162.49 54151 43099 61588 57934 58623 74094 71940 66705 78645 73215 75161 69743 85723 67494 69077 68335 88986 79815 50120 39582 61900 57499 61532 73491 71964 68828 79596 73565 77695 70884 86343 69796 71620 69309 84886 75720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92129000 12235 726 11571 23447;23448 18837;18838 18838 2 9606 Homo sapiens 0.014974800984418835 HSAGGGNVQIVTK Unmodified 1266.668 0.66804818 275 A0A024R3Z1;A0A024R3Y8;P11137-4;Q16296 MAP2;4R-MAP2 Microtubule-associated protein;Microtubule-associated protein 2 yes no 0 0 0 4.5 3.5 1 1 36.52 36.513 3 0.0017503 8565 20230619_1880_Aki_TMTPro18x_K_F1 75.462 51.611 47652 34549 45711 45774 51617 64146 66248 61450 82800 96706 97632 122300 149420 116080 71634 110900 130160 187420 44016 31737 46712 45544 53618 63384 66434 63896 84114 96625 101800 122660 147110 119850 77666 115660 124370 176990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69907000 12236 275 11572 23449;23450 18839;18840 18839 2 9606 Homo sapiens 0.045380878236983335 HSAILASPNPDEK Unmodified 1377.6888 0.6888432 992 A0A0C4DFZ1;A8MZ54;Q75ME0;Q16623-3;Q16623-2;Q16623;X5D7S1 STX1A Syntaxin-1A yes no 0 0 0 4.5 0.5 1 1 39.722 39.764 3 7.6782E-11 9458 20230619_1883_Aki_TMTPro18x_K_F4 136.01 121.33 30158 24085 29305 35175 24789 27549 28429 26858 33582 38328 43605 45923 40936 38615 33268 46275 50219 46931 27875 22140 29804 34494 26213 28417 28630 27822 34328 38344 44153 46024 41540 40455 34970 46378 47863 44581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32269000 12237 992 11573 23451;23452 18841;18842 18841 2 9606 Homo sapiens 0.015106334126812726 HSAQTEEPVQAK Unmodified 1323.6419 0.64189301 1588 Q15154;Q15154-5;H0YBA1;D3DSQ0;A0A5H1ZRS1;B9EIS5;A0A088AWL4 PCM1 Pericentriolar material 1 protein yes no 0 0 0 3 0 1 31.656 31.734 3 4.4883E-07 6269 20230619_1882_Aki_TMTPro18x_K_F3 153.34 138.35 12060 4278.5 12719 15948 21462 27032 13575 17893 15325 12193 21046 25181 13262 19416 20222 7513 18982 20509 11117 4024.3 13018 15250 21419 26245 14217 18748 15721 13030 21022 24745 14162 19560 20301 8516.1 18185 19336 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10054000 12238 1588 11574 23453 18843 18843 1 9606 Homo sapiens -0.006982261384564481 HSATPFLK Unmodified 899.4865 0.48650199 3409 P08243-2;P08243;P08243-3;B4DY32;F8WEJ5;C9J057 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 2.5 0.5 1 1 40.867 40.933 3 0.0038646 10016 20230619_1882_Aki_TMTPro18x_K_F3 84.498 58.761 192710 142630 190160 193060 177520 179020 178910 167330 198510 231630 258580 253240 248020 211090 233960 258030 264690 265270 178070 131040 193160 190630 185320 181870 181040 173580 203640 231250 261970 254690 252790 221620 239980 258880 252960 251880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 588740000 12239 3409 11575 23454;23455 18844 18844 1 9606 Homo sapiens 0.0327381958860542 HSDGNLCVK Unmodified 1028.4709 0.47092828 3608 P49458;Q6P2S0;Q659G3;E9PE20;A0A024R3P3;P49458-2 SRP9;DKFZp564M2223 Signal recognition particle 9 kDa protein yes no 0 0 0 5.5 1.12 1 1 1 1 34.619 34.684 3 3.1537E-09 7492 20230619_1886_Aki_TMTPro18x_K_F6 187.5 158.76 134270 56237 148030 154610 259250 262850 189220 238990 206580 127650 210920 212790 217890 201780 209120 95071 242760 225270 123880 52417 150910 149250 258390 256810 195480 242610 209370 137690 216550 211720 221850 202940 213980 104950 231820 212650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1664099999.9999998 12240 3608 11576 23456;23457;23458;23459 18845;18846 18846 2 9606 Homo sapiens -0.04216834990734242 HSDSKEDDGQEIA Unmodified 1429.5957 0.59573068 1006 A0A0C4DGH0;B4DK26;A8K6Q6;Q5ZPR3;H0YL10;Q5ZPR3-2;H0YN29 CD276 CD276 antigen yes no 0 0 1 1.5 0.5 1 1 33.542 33.571 3 1.0668E-07 7397 20230619_1880_Aki_TMTPro18x_K_F1 125.28 118.56 18990 9760.4 24731 27083 52534 53394 27346 30384 42068 29236 43823 54899 35213 35947 38284 13705 39140 40342 17562 9087.1 25065 26206 51674 51440 29492 32589 42056 30426 44576 53821 36390 36520 38783 15713 37449 38030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47411000 12241 1006 11577 23460;23461 18847 18847 1 9606 Homo sapiens -0.10188335831185213 HSEAATAQREEWK Unmodified 1541.7223 0.7222686 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;D6RAF8;D6RD83 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 1 4.57 1.4 2 2 1 1 1 33.231 33.298 3;4 1.8068E-21 6838 20230619_1883_Aki_TMTPro18x_K_F4 237.32 184.02 942900 982310 970890 827050 1245800 1014700 1073600 1017500 1092600 1205400 1157000 1003500 1154700 773880 1076700 935170 1244400 850830 873580 897640 986700 851880 1264500 1013900 1093300 1044000 1115800 1201600 1183000 1019900 1173500 815440 1104500 933070 1186300 810460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2741300000 12242 759 11578 23462;23463;23464;23465;23466;23467;23468 18848;18849 18849 2 9606 Homo sapiens -0.02692364815379733 HSEAFEALQQK Unmodified 1286.6255 0.62551466 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 4.5 0.5 1 1 43.033 43.096 3 5.943E-05 10794 20230619_1885_Aki_TMTPro18x_K_F5 128.35 100.33 180540 143080 182200 199330 242560 243710 237070 235850 259000 234730 270790 254490 264810 229670 263420 265910 278210 277210 166920 131460 185950 197200 246810 242890 240010 241430 263010 237940 276950 256740 270420 239630 268720 267270 266040 263180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 453670000 12243 673 11579 23469;23470 18850;18851 18851 2 9606 Homo sapiens -0.006333073045425408 HSELLQK Unmodified 853.46577 0.46576654 1117 H7C5V3;A0A0S2Z5D2;A0A0S2Z563;A0A0S2Z5H0;Q9Y2Q9;E5RFT8;Q53G62 MRPS28 28S ribosomal protein S28, mitochondrial yes no 0 0 0 6.5 0.5 1 1 37.367 37.433 3 0.0043629 8277 20230619_1887_Aki_TMTPro18x_K_F7 105.39 44.603 42100 35660 44091 44956 48402 54637 46507 47271 70485 55293 61061 62835 61110 54111 48995 51325 72265 67424 38953 32720 44692 44760 49934 54343 47741 49013 70026 55726 63080 63118 61834 55971 51326 52521 68884 63887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234010000 12244 1117 11580 23471;23472 18852 18852 1 9606 Homo sapiens 0.03317229208948902 HSELSELNVK Unmodified 1154.5932 0.5931519 2290 B2RAY1;Q92783-2;Q92783;B4DZT2;O75886 STAM;STAM2 Signal transducing adapter molecule 1;Signal transducing adapter molecule 2 yes no 0 0 0 4 0.707 1 2 1 42.178 42.235 3 0.02027 10935 20230619_1883_Aki_TMTPro18x_K_F4 52.278 19.054 210950 227290 250070 227990 614190 544840 395650 353480 653970 330310 442630 617120 359040 312040 379770 421050 498490 609040 195750 207950 255990 234310 602640 522920 418980 373670 642170 344450 461530 602520 370400 337690 392630 431670 476570 576070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 721900000 12245 2290 11581 23473;23474;23475;23476 18853;18854 18854 2 9606 Homo sapiens 0.022039052924583302 HSFCDNLPK Unmodified 1116.5022 0.50222841 4087 Q68CP0;Q63HJ5;Q96JM2;Q96JM2-3;Q6ZS14 DKFZp686B2325;DKFZp686L2367;ZNF462 Zinc finger protein 462 yes no 0 0 0 7 0 1 41.251 41.322 3 0.019624 9822 20230619_1887_Aki_TMTPro18x_K_F7 64.04 25.954 30032 17956 28938 33484 37811 41134 35693 34574 40466 36383 35558 40238 37746 38970 32936 47822 54650 42925 27715 16582 29649 32601 38516 40838 36250 35826 40766 36810 36841 40637 38307 40665 34852 47598 51998 40865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16305000 12246 4087 11582 23477 18855 18855 1 9606 Homo sapiens -0.051362619566589274 HSFCEGCITR Unmodified 1265.5281 0.52812558 656 A0A0C4DGI8;F8VUZ4;A0A024RB96;Q8N9I9;Q8N9I9-2 DTX3 Probable E3 ubiquitin-protein ligase DTX3 yes no 0 0 0 5.5 0.5 1 1 33.957 34.023 3 7.0025E-06 7250 20230619_1886_Aki_TMTPro18x_K_F6 135.8 113.8 45614 40827 46729 46546 54723 54184 54590 57058 59620 56053 65475 54055 59202 57644 55822 49590 63937 59169 42211 37417 47489 46660 56150 54301 55221 58044 60668 56653 66549 55115 60509 58907 57232 50531 61063 56115 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20355000 12247 656 11583 23478;23479 18856;18857 18857 2 9606 Homo sapiens -0.09401735776668829 HSFGPLDYESLQQELALK Unmodified 2074.0371 0.037120373 3339 O94925-3;B3KM58;Q68D38;B8ZZC5;B8ZZA8 GLS;DKFZp686O15119 Glutaminase kidney isoform, mitochondrial yes no 0 0 0 7 0 1 62.202 62.238 3 0.0021631 18805 20230619_1887_Aki_TMTPro18x_K_F7 66.738 50.795 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12248 3339 11584 23480 18858 18858 1 9606 Homo sapiens 0.04306329752898819 HSGAFQLCGR Unmodified 1131.5244 0.52436083 807 B4DYL2;A0A087WTJ9;Q8IWV7;A8K901;Q8IWV7-2 UBR1 E3 ubiquitin-protein ligase UBR1 yes no 0 0 0 2 0 1 34.589 34.646 3 0.00013744 7534 20230619_1881_Aki_TMTPro18x_K_F2 100.58 87.077 33670 17990 29532 34262 32848 20970 30961 31684 34752 36661 46791 49023 47551 35956 30148 38580 35486 45824 31035 16628 30398 33073 33698 22480 31464 31785 35670 37134 47459 48746 47637 37681 31308 39110 33973 43409 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16483000 12249 807 11585 23481 18859 18859 1 9606 Homo sapiens -0.0361403748822795 HSGDYFTLLR Unmodified 1207.5986 0.59857163 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;A0A994J766;A0A994J588 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 0 1 0 1 48.844 48.844 3 2.7093E-10 13888 20230619_1880_Aki_TMTPro18x_K_F1 210.64 178.17 25154 19990 25467 29005 29593 27744 29511 27457 26031 32759 32497 31329 33874 28947 33411 34275 36816 35170 23257 18375 25922 28522 30355 28152 29659 28223 27013 32765 33100 31792 34507 30225 34174 34407 35181 33401 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37205000 12250 1867 11586 23482 18860 18860 1 9606 Homo sapiens 0.003076288749525702 HSGFCLETQNWPDAVNQPR Unmodified 2255.0178 0.017798689 1409 B8ZZ75;A0A384MDW6;Q96C23 GALM Aldose 1-epimerase yes no 0 0 0 7 0 1 51.067 51.145 3 6.5373E-07 14103 20230619_1887_Aki_TMTPro18x_K_F7 86.573 83.961 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12251 1409 11587 23483 18861 18861 1 9606 Homo sapiens -0.05950949809721351 HSGIDFK Unmodified 802.39735 0.39735263 963 V9HWF0;A0A0A0MTH3;Q13418;Q13418-3 HEL-S-28;ILK Integrin-linked protein kinase yes no 0 0 0 6.5 0.5 1 1 39.203 39.279 3 0.0003343 8941 20230619_1887_Aki_TMTPro18x_K_F7 161.68 105.64 81262 51927 69480 70398 84671 88689 99054 92686 129710 99730 123370 113170 128130 106040 104450 116570 132780 118000 74948 47739 71807 69821 87166 88378 99928 94592 130010 100900 126980 114100 129500 110180 108250 117030 126660 112110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174280000 12252 963 11588 23484;23485 18862 18862 1 9606 Homo sapiens -0.011750153709044753 HSGNITFDEIVNIAR Unmodified 1684.8533 0.85328277 3530 P30050;P30050-2 RPL12 60S ribosomal protein L12 yes no 0 0 0 6.5 0.5 1 1 56.347 56.414 3 5.0779000000000005E-64 16322 20230619_1887_Aki_TMTPro18x_K_F7 329.35 298.96 460980 371320 404030 445100 416570 454620 431080 451920 510310 503520 503670 491810 500780 454280 481880 581920 467730 515210 425780 340600 415560 443620 432310 459010 436410 463220 515250 505770 516900 498740 510450 476370 490160 578720 447990 489880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18422000000 12253 3530 11589 23486;23487 18863 18863 1 9606 Homo sapiens 0.038250258326570474 HSGPNSADSANDGFVR Unmodified 1629.7132 0.71316047 470 A0A024R7T3;P52597;B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 0 0 4 1.58 1 1 1 1 32.069 32.132 3 9.6971E-43 6443 20230619_1885_Aki_TMTPro18x_K_F5 278.85 258.19 50522 36983 50323 56111 69518 83647 64770 73202 79354 57170 77849 90760 78922 74753 61123 67351 90028 86374 46684 34024 51473 55415 70638 82196 66040 75045 79866 59698 80052 90037 79748 77210 64091 68860 85834 81850 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 496620000 12254 470 11590 23488;23489;23490;23491 18864;18865;18866;18867 18866 4 9606 Homo sapiens -0.07650758171757843 HSIEVPIPR Unmodified 1046.5873 0.58727866 120 A0A024R104;Q12860-2;Q12860;H0YIJ1 CNTN1 Contactin-1 yes no 0 0 0 7 0 1 41.423 41.494 3 7.9505E-05 9818 20230619_1887_Aki_TMTPro18x_K_F7 126.07 93.227 99767 73504 89164 86441 86301 84771 89775 84018 103040 113920 124880 126770 129120 109060 107880 127860 145730 135680 92113 67434 91374 86249 89920 85887 90765 86719 105150 113910 127270 127500 130660 114090 112260 128570 139000 128820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65396000 12255 120 11591 23492 18868 18868 1 9606 Homo sapiens 0.06584851571460604 HSINPYSNR Unmodified 1086.5207 0.52065566 289 A0A024R4C8;B4DZS0;O76075-2;O76075 DFFB DNA fragmentation factor subunit beta yes no 0 0 0 8 0 1 29.931 29.947 3 0.0025771 5641 20230619_1888_Aki_TMTPro18x_K_F8 72.478 65.328 16681 9905.1 22254 18370 24872 24537 17883 25578 21280 15321 18909 22379 15600 17560 20060 8376 25139 16889 15441 9146.5 22149 17935 25408 24357 18576 25759 21378 16247 19400 22206 16275 17774 20529 9085.8 23947 15981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6004100 12256 289 11592 23493 18869 18869 1 9606 Homo sapiens -0.01914383990447277 HSLAEILR Unmodified 937.53451 0.53451481 2626 B4DYZ1;Q9H8H2;Q9H8H2-2 DDX31 Probable ATP-dependent RNA helicase DDX31 yes no 0 0 0 7.5 0.5 1 1 43.777 43.821 3 0.00013586 11000 20230619_1888_Aki_TMTPro18x_K_F8 163.04 117.02 38000 31401 41837 40977 37274 45780 44886 36503 52911 40096 37652 35135 37877 33773 42377 43963 42748 39884 35169 28825 42115 40653 39315 45702 45043 38059 52806 40224 39358 35866 38885 35414 43041 43784 40877 37936 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48041000 12257 2626 11593 23494;23495 18870 18870 1 9606 Homo sapiens 0.0632489350865626 HSLAFVVR Unmodified 927.52904 0.5290355 747 A0A024RD36;Q6DKI1;B7Z4G0;R4GMU7;Q6DKI1-2 RPL7L1 60S ribosomal protein L7-like 1 yes no 0 0 0 3 0 1 40.537 40.593 3 2.1289E-05 9876 20230619_1882_Aki_TMTPro18x_K_F3 161.9 137.93 55936 44517 51518 53917 59779 62827 61905 58572 66293 36064 38268 36903 39455 31725 48573 33948 43367 37601 51680 40840 52838 53799 61478 62763 62405 59545 66079 37733 40657 37268 40660 33029 48859 34334 41504 35696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46659000 12258 747 11594 23496 18871 18871 1 9606 Homo sapiens 0.06237214716861672 HSLASSEYPVR Unmodified 1244.6149 0.61494998 3624 V9HWE7;P51570;Q6ZP37;Q71UH7;C8CHJ6 HEL-S-19;GALK1;GALK Galactokinase yes no 0 0 0 6 0 1 34.226 34.272 3 1.9419E-09 7354 20230619_1886_Aki_TMTPro18x_K_F6 186.87 148.88 17178 13270 19043 22264 29034 26734 23414 26806 28021 20908 24359 27264 25147 22843 26852 20718 30285 23120 15893 12221 19353 21787 29175 26693 24079 27213 28125 21647 25226 27228 25737 23588 27426 21014 28894 21960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49316000 12259 3624 11595 23497 18872 18872 1 9606 Homo sapiens 0.002427100410386629 HSLDASQGTATGPR Unmodified 1396.6695 0.66950474 1745 A0A8C8MSB2;B2R673;O00330-3;O00330;E9PLU0;E9PRI6 PDHX Pyruvate dehydrogenase protein X component, mitochondrial yes no 0 0 0 4.5 0.5 1 1 29.361 29.433 3 6.3024999999999994E-58 5322 20230619_1883_Aki_TMTPro18x_K_F4 273.72 254.08 13077 8799.1 12428 13458 16587 17437 15267 14902 18060 15504 17440 17055 16557 16570 15395 12557 21682 18493 12073 8098.9 12747 13252 16862 17268 15554 15415 18210 15693 17881 17218 16895 16895 16004 13027 20662 17514 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81393000 12260 1745 11596 23498;23499 18873;18874 18873 2 9606 Homo sapiens -0.012963228781927683 HSLEEDEGSDFITENR Unmodified 1876.8075 0.80751437 4599 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 0 1 0 1 43.917 43.917 3 4.0253999999999996E-53 11827 20230619_1880_Aki_TMTPro18x_K_F1 309.87 274.53 36722 37049 45535 49624 46964 43000 50252 39303 53987 54016 62515 59762 53336 46273 53004 53311 62203 57229 34072 33996 45561 48982 48656 43928 50584 40860 55115 53979 63320 59943 54720 48547 54412 53683 59392 54333 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106580000 12261 4599 11597 23500 18875 18875 1 9606 Homo sapiens -0.09581708930886634 HSLNIGDYNR Unmodified 1187.5683 0.56833414 3089 H7C269;Q8NDV7-3;Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7 TNRC6A Trinucleotide repeat-containing gene 6A protein yes no 0 0 0 6.5 0.5 1 1 37.218 37.285 3 0.00024857 8199 20230619_1887_Aki_TMTPro18x_K_F7 115.82 88.394 17451 11549 16479 18906 19813 19962 19214 25314 31192 19113 20406 20789 21982 18459 20280 19785 23002 20517 16110 10640 16883 18496 20311 20219 19781 25304 30632 19715 21512 20954 22310 19189 20797 19907 21965 19488 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23951000 12262 3089 11598 23501;23502 18876 18876 1 9606 Homo sapiens -0.017947297902537684 HSLNSSSASTTEPDFQK Unmodified 1834.8333 0.83333519 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;B4DSR0;A0A804HJI0 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 7 0 1 40.425 40.493 3 3.0828E-06 9473 20230619_1887_Aki_TMTPro18x_K_F7 103.88 92.355 5200 5840.9 6161.3 7938.9 7138.3 8041.3 7730.8 5928.1 5150.9 6729 8298 8486.4 7289.5 5555.2 8523.6 8424.5 8295.5 10587 4826.8 5358.8 6205.6 7839.7 7343.6 8074.3 7680.2 6234 5522.9 6806.7 8327.8 8438.3 7524.2 5984.1 8633.6 8539 7955.1 10024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15922000 12263 1723 11599 23503 18877 18877 1 9606 Homo sapiens -0.050688146886386676 HSLSGRPLK Unmodified 993.57196 0.57196295 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;M0R019;M0R2T0;B4DEG4;M0R0N3;M0QYQ7 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 1 5 1.41 1 1 1 1 1 31.484 31.554 4 0.0021688 6232 20230619_1882_Aki_TMTPro18x_K_F3 99.688 21.765 843740 658910 761530 825280 1164500 1066300 975510 1022800 1113000 793710 849990 699790 773220 629620 770310 772740 956090 698580 779330 604730 786610 822900 1171300 1059400 998580 1041400 1114900 812110 880180 713090 791620 659490 793510 770170 911200 665240 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 508360000 12264 3631 11600 23504;23505;23506;23507;23508 18878;18879;18880;18881;18882;18883;18884;18885 18878 8 9606 Homo sapiens 0.07491984774264893 HSMLFIEASAK Oxidation (M) 1248.6173 0.61725816 4557 Q9NP72;Q9NP72-2;B7Z5V3;Q5W0J0;Q9NP72-3;Q59EW3;A0A804HJJ8;A0A804HL33 RAB18 Ras-related protein Rab-18 yes no 0 1 0 7.5 0.5 1 1 44.252 44.303 3 0.012444 11045 20230619_1887_Aki_TMTPro18x_K_F7 63.473 42.441 49459 38826 44099 52394 55118 55963 54287 57295 63443 52553 62203 60121 60880 53286 54850 57271 70384 63514 45681 35661 45454 51829 56341 56351 55071 58312 64026 53611 63802 60478 61916 55401 56747 57836 67145 60285 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98946000 12265 4557 11601 23509;23510 18886 18886 2813 1 9606 Homo sapiens 0.002894224544888857 HSMNILNR Oxidation (M) 999.492 0.49199807 3102 Q9NUU7;I3L0H8;Q9UMR2;Q9UMR2-4;Q9UMR2-2;A0A0U4B4U6;F6QDS0;H3BQK0;Q53G16;Q7Z4W5;Q9HBZ9;Q2NL95;B4DS24;Q69YM2;I3L352;Q68DY7;B4DL69;A0A024QZ90;Q59FQ9;Q9UMR2-3;Q9NUU7-2 DDX19A;DDX19B;DKFZp762C1313;DKFZp686C21137;hCG_1998531 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B yes no 0 1 0 2 0 1 29.312 29.384 3 0.026367 5512 20230619_1881_Aki_TMTPro18x_K_F2 60.91 45.248 11507 9450 13588 13764 17086 14855 14265 16357 17048 14583 14829 15103 16956 16233 16325 13639 21246 15123 10657 8685.8 13677 13559 17361 14979 14640 16552 17125 14854 15417 15343 17227 16565 16864 13844 20238 14370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2342100 12266 3102 11602 23511 18887 18887 1800 1 9606 Homo sapiens -0.007768248912157105 HSMNILNR Unmodified 983.49708 0.49708345 3102 Q9NUU7;I3L0H8;Q9UMR2;Q9UMR2-4;Q9UMR2-2;A0A0U4B4U6;F6QDS0;H3BQK0;Q53G16;Q7Z4W5;Q9HBZ9;Q2NL95;B4DS24;Q69YM2;I3L352;Q68DY7;B4DL69;A0A024QZ90;Q59FQ9;Q9UMR2-3;Q9NUU7-2 DDX19A;DDX19B;DKFZp762C1313;DKFZp686C21137;hCG_1998531 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B yes no 0 0 0 2 0 1 35.235 35.291 3 0.00011719 7774 20230619_1881_Aki_TMTPro18x_K_F2 164.53 125.74 50032 37562 44749 46060 51499 55692 50663 51402 62231 53155 54733 49315 55429 48404 45478 54171 59117 53955 46199 34471 46003 45947 52958 55490 51489 52845 62429 53539 56489 50230 56101 50266 47218 54311 56395 51268 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126970000 12267 3102 11602 23512 18888 18888 1 9606 Homo sapiens 0.0046747897139312045 HSMNPFCEIAVEEAVR Oxidation (M) 1903.8557 0.85566731 3563 P38117-2;P38117;M0QY67 ETFB Electron transfer flavoprotein subunit beta yes no 0 1 0 4 0 1 50.95 50.981 3 3.8158E-06 14467 20230619_1883_Aki_TMTPro18x_K_F4 112.3 109.66 30563 23088 30164 32473 34478 36677 32091 30830 45445 33735 36491 38573 35241 35168 38880 42173 37531 45277 28244 21219 30749 32063 35422 36632 32902 31989 45150 34121 37828 38831 36220 36738 39419 42432 35976 42943 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 344740000 12268 3563 11603 23513 18889 18889 2226 1 9606 Homo sapiens -0.06010629816205437 HSMNPFCEIAVEEAVR Unmodified 1887.8608 0.86075269 3563 P38117-2;P38117;M0QY67 ETFB Electron transfer flavoprotein subunit beta yes no 0 0 0 4 0 1 54.546 54.561 3 2.5128E-19 16028 20230619_1883_Aki_TMTPro18x_K_F4 203.2 191.83 149490 118570 139940 151340 135880 152440 162430 158130 174270 151380 139980 143070 156620 152770 165340 173410 164270 171570 138130 108840 142970 150170 142200 154190 162590 161000 175490 153160 146060 145990 159890 158280 167960 173810 157240 162950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 167870000 12269 3563 11603 23514 18890;18891 18891 2 9606 Homo sapiens -0.04766325953573869 HSMQTPVR Unmodified 954.47053 0.47053435 4678 Q9UKN8;Q05CN7 GTF3C4 General transcription factor 3C polypeptide 4 yes no 0 0 0 8 0 1 26.872 26.905 3 0.00052712 4613 20230619_1888_Aki_TMTPro18x_K_F8 135.83 80.389 13441 10023 15690 13310 15117 19017 15536 19813 19504 11991 12814 13022 12019 11467 13596 9496.3 17934 15211 12439 9206.3 15731 13253 15777 18801 15774 19957 19354 12577 13433 13118 12384 11780 14012 9908.1 17098 14397 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4467500 12270 4678 11604 23515 18892 18892 1 9606 Homo sapiens -0.008522099199353761 HSNLMLEDLDK Oxidation (M) 1329.6235 0.62346575 3431 P11171;P11171-2;Q1WWM3;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;A0A994J847;A0A2R8YCW8;P11171-7;A0A2R8Y5Z6;A0A2R8Y5G2;A0A2R8Y420;A0A2R8Y5C8 EPB41 Protein 4.1 yes no 0 1 0 4 0 1 45.504 45.548 3 0.011137 11906 20230619_1883_Aki_TMTPro18x_K_F4 64.65 47.325 41458 35246 44173 42784 44738 47369 49952 43981 56233 54942 60111 53447 53896 47414 56374 54606 61053 62376 38365 32328 44648 42658 46542 47487 50254 45473 57076 54904 61183 54137 55334 49500 57530 55199 58379 59158 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33822000 12271 3431 11605 23516 18893 18893 2057 1 9606 Homo sapiens -0.028161041046814717 HSNVVILTTSNITEK Unmodified 1654.889 0.88899957 3937 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 4.5 3.5 1 1 48.02 48.049 3 2.347E-14 12687 20230619_1888_Aki_TMTPro18x_K_F8 186.42 161.86 94229 79899 93903 101360 96034 106000 108910 100070 122960 103760 103310 88380 97736 80123 114540 87106 87790 89852 87148 73316 95501 100650 99932 106700 109480 102770 123640 104240 106620 90157 100670 83331 114550 87676 84269 85306 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 195650000 12272 3937 11606 23517;23518 18894;18895 18895 2 9606 Homo sapiens 0.08775063289681384 HSPMVAK Unmodified 768.39524 0.39524414 2555 B4DNN4;Q53GZ5;P23921;B4E0I8 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 0 0 0 4.5 3.5 1 1 33.351 33.348 3 0.0019004 6868 20230619_1888_Aki_TMTPro18x_K_F8 130.77 105.77 71790 37765 86920 79531 111700 130420 85362 104270 96052 73402 104680 105910 86352 81029 87693 52953 101450 84115 66350 34966 87362 77470 113380 127290 88017 107420 97498 76854 106200 105150 88825 82905 89702 55547 96816 79627 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41613000 12273 2555 11607 23519;23520 18896;18897 18897 2 9606 Homo sapiens 0.0017823261963485493 HSPMVAK Oxidation (M) 784.39016 0.39015876 2555 B4DNN4;Q53GZ5;P23921;B4E0I8 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 0 1 0 7.5 0.5 1 1 30.014 30.075 3 0.041905 5356 20230619_1887_Aki_TMTPro18x_K_F7 58.167 30.643 14673 10759 19310 16411 25727 27166 21908 24002 21072 15299 17867 22673 16474 15420 20940 8848.9 20389 16275 13594 9898.4 19309 16247 26084 26572 22292 24492 21374 16154 18468 22403 17080 15796 21114 9458.1 19485 15395 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12081000 12274 2555 11607 23521;23522 18898 18898 1551 1 9606 Homo sapiens -0.01066071242973976 HSPQEAPHVQYER Unmodified 1576.7383 0.73825301 968 A0A0A0N0N2;P26992;Q5T8H6 CNTFR Ciliary neurotrophic factor receptor subunit alpha yes no 0 0 0 3.5 0.5 2 2 29.072 29.158 3;4 5.1297E-06 5194 20230619_1882_Aki_TMTPro18x_K_F3 132.31 121.79 37275 26476 37820 39640 42801 44775 39505 43143 48787 47591 61106 64411 55770 49239 61422 42480 65437 61727 34443 24357 38453 39004 43968 44841 40338 44304 49648 48363 61916 64068 57363 50944 62470 43942 62546 58439 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 389290000 12275 968 11608 23523;23524;23525;23526 18899;18900;18901;18902 18899 4 9606 Homo sapiens -0.027046585785001298 HSPTEDEESAK Unmodified 1228.5208 0.52077482 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 1 0 1 30.749 30.749 3 1.5079E-12 6275 20230619_1880_Aki_TMTPro18x_K_F1 205.52 182.15 11464 4927 12611 14276 18123 19392 14917 14329 18816 10421 22036 37526 16533 24729 20397 7850.9 34706 36775 10578 4597 12807 13689 18300 19086 15347 14904 19027 11578 22328 36347 17321 25011 21389 9822.1 33082 34615 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20356000 12276 630 11609 23527 18903 18903 1 9606 Homo sapiens -0.08434473571765011 HSPTEDEESAKAEADAYIR Unmodified 2117.9502 0.95015586 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 1 1.5 0.5 1 1 46.748 46.787 4 1.5021E-14 12946 20230619_1881_Aki_TMTPro18x_K_F2 162.77 151.65 222400 193370 216580 241940 216060 204570 189990 181010 245300 281620 299890 225960 249990 214140 276240 214100 192000 157610 205680 177390 220530 239820 223620 209320 194930 189350 249090 277540 302460 231560 257800 221230 275440 212280 184280 150420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 384640000 12277 630 11610 23528;23529 18904;18905 18905 2 9606 Homo sapiens -0.06410121259477819 HSPWADGTPCGPAQACMGGR Oxidation (M) 2127.8673 0.8673114 2089 A8K6A8;O75173;O75173-2;A0A384ME91 ADAMTS4 A disintegrin and metalloproteinase with thrombospondin motifs 4 yes no 0 1 0 7 0 1 38.971 39.035 3 0.0012174 8860 20230619_1887_Aki_TMTPro18x_K_F7 62.658 61.161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12278 2089 11611 23530 18906 18906 1320 1 9606 Homo sapiens -0.1515075606453138 HSQALEALQQR Unmodified 1279.6633 0.66329715 1796 A0A8Q3SHZ3;O95613-2;O95613 PCNT Pericentrin yes no 0 0 0 7 0 1 35.971 36.039 3 0.00014304 7714 20230619_1887_Aki_TMTPro18x_K_F7 100.09 82.918 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12279 1796 11612 23531 18907 18907 1 9606 Homo sapiens 0.03465203680934792 HSQEELLQR Unmodified 1138.5731 0.57308516 1743 A0A8B0RAT7;Q6P2E9;Q6P2E9-2 EDC4 Enhancer of mRNA-decapping protein 4 yes no 0 0 0 3 0 1 32.006 32.084 3 1.4426E-12 6420 20230619_1882_Aki_TMTPro18x_K_F3 205.83 150.46 46587 66454 55758 46194 51866 66851 48052 47131 66708 49122 55535 60549 61844 50750 60687 56569 77891 58649 43348 60605 55765 48678 54168 65641 49268 49566 66411 49944 57820 60606 62879 52982 62645 56890 74226 55753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90013000 12280 1743 11613 23532 18908 18908 1 9606 Homo sapiens 0.009341543525124507 HSQELPAILDDTTLSGSDR Unmodified 2053.9916 0.99162674 2356 B4E0B7;B3KMS0;Q15021;A0PJ76;F5GZK7 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 2 0 1 52.539 52.572 3 5.0855E-05 15560 20230619_1881_Aki_TMTPro18x_K_F2 88.969 79.181 26558 20611 25833 22702 24009 30774 28798 28056 36117 25599 23891 28138 25800 28331 26648 30923 29560 30053 24544 18893 26263 22876 25257 30436 28978 28779 35864 26109 25207 28453 26367 29322 27267 30975 28258 28552 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114610000 12281 2356 11614 23533 18909 18909 1 9606 Homo sapiens 0.006790594998165034 HSQFIGYPITLFVEK Unmodified 1777.9403 0.94030686 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;Q86U12;G3V2J8;Q58FG0 EL52;HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 yes no 0 0 0 4 0 1 62.257 62.262 3 1.114E-10 19363 20230619_1883_Aki_TMTPro18x_K_F4 156.17 138.68 172450 134590 148700 185340 132000 175830 160660 144630 184840 182470 178380 159180 167280 154940 178040 189180 182580 173330 159230 123650 153030 182760 139530 177710 161070 151040 186690 181740 182750 162580 171690 161720 181160 188650 174580 164830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193460000 12282 3177 11615 23534 18910 18910 1 9606 Homo sapiens 0.08245432054377488 HSQFLGYPITLYLEK Unmodified 1807.9509 0.95087155 4018 Q58FF8 HSP90AB2P Putative heat shock protein HSP 90-beta 2 yes yes 0 0 0 2.5 0.5 1 1 61.956 61.976 3 4.5326E-15 19190 20230619_1882_Aki_TMTPro18x_K_F3 192.78 0 2016500 1615200 1826900 1841700 1421100 1955500 1725800 1726600 2146900 1466000 1284200 1126800 1307800 1182600 1590100 1614500 1438900 1132200 1862900 1480900 1865800 1843300 1520700 1962800 1735700 1773100 2127100 1487000 1358900 1162600 1348300 1240100 1603600 1588600 1376000 1081600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2675600000 12283 4018 11616 23535;23536 18911 18911 1 9606 Homo sapiens 0.07921414708835073 HSQPATPTPLQSR Unmodified 1418.7266 0.72662569 4580 Q9NR12;Q9NR12-2 PDLIM7 PDZ and LIM domain protein 7 yes no 0 0 0 7.5 0.5 1 1 31.174 31.228 3 6.5767E-05 5808 20230619_1887_Aki_TMTPro18x_K_F7 108.66 94.363 6160.9 3725 4880.4 3416.4 5774.5 7189.6 4831.6 6057.5 7915 4946.2 7228.5 6300.7 5447.8 6688.4 7502.7 7819 8019.9 6474.7 5677.8 3413.3 5068.7 3530.5 5918.8 6956.7 5024.7 6228.6 7846.9 5108.2 7366.8 6359.6 5730.3 6933 7623.2 7764.4 7657.7 6169.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100100000 12284 4580 11617 23537;23538 18912 18912 1 9606 Homo sapiens 0.034011443981626144 HSQPIPK Unmodified 805.44464 0.44463717 698 A0A024RBX6;O00625 PIR Pirin yes no 0 0 0 7.5 0.5 1 1 31.593 31.644 3 0.019962 6002 20230619_1887_Aki_TMTPro18x_K_F7 76.899 51.9 50749 28498 63570 58926 89809 95894 72486 85173 77819 66345 94972 104240 77890 74499 83415 47694 109520 88575 46933 26368 63873 57442 90682 93850 74309 87190 79596 69202 95962 102990 80370 76405 85950 50780 104390 83773 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36426000 12285 698 11618 23539;23540 18913;18914 18913 2 9606 Homo sapiens 0.034132639000858944 HSQTDLVSR Unmodified 1041.5203 0.52032131 2919 E9PN66;E9PNB3;E9PKN9;E9PS55;E9PMY0;E9PMW4;E9PQ46;E9PIN5;E9PIK4;U3KQ32;E9PKZ4;E9PPM1;Q99785;O14683 TP53I11 Tumor protein p53-inducible protein 11 yes no 0 0 0 4 0.816 1 1 1 27.033 27.125 3 0.00010593 5035 20230619_1885_Aki_TMTPro18x_K_F5 121.5 83.944 13243 7583.4 13229 17809 18448 15067 18447 21032 24635 9844.6 15712 14082 16220 15510 11184 11596 20703 15299 12223 7031.9 13542 17089 18715 15572 18784 20775 24332 10701 16543 14170 16325 15740 11985 11926 19679 14511 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13237000 12286 2919 11619 23541;23542;23543 18915;18916 18916 2 9606 Homo sapiens 0.0012219628972616192 HSQTIDDPQCPSGTK Unmodified 1669.7366 0.73659803 1513 A9LSU1;A0A3B3ISV3;A0A6G9EL94;Q59F15;P02462 COL4A1 Collagen alpha-1(IV) chain;Arresten yes no 0 0 0 3 0 1 34.399 34.46 3 2.7932E-05 7374 20230619_1882_Aki_TMTPro18x_K_F3 98.676 91.948 6717.3 4721.5 6294.3 6715.3 11417 11697 8281 7510.5 10683 6700.1 7509.7 10561 7916.2 6190.2 6617.8 7434 8500.6 10292 6202.6 4341.2 6507.4 6676.3 11368 11353 8598.8 7941.9 10614 6941.2 7891.2 10386 8004.5 6598.8 6861.1 7607.2 8127.5 9738.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25881000 12287 1513 11620 23544 18917 18917 1 9606 Homo sapiens -0.07148080449428562 HSRPIVTVWER Unmodified 1378.747 0.7469672 703 A0A0C4DGQ6;A0A024RC37;Q96P16;K7EQR8 RPRD1A;P15RS Regulation of nuclear pre-mRNA domain-containing protein 1A yes no 0 0 1 3 0 1 36.836 36.89 4 0.00066829 8330 20230619_1882_Aki_TMTPro18x_K_F3 91.858 52.149 29947 20702 28380 29020 25631 28829 27318 30402 35415 27528 27125 26801 26749 20116 30213 31745 28973 27579 27653 19032 28919 28620 26908 29193 27710 30868 35270 27959 28210 27030 27463 21592 30602 31475 27724 26244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10616000 12288 703 11621 23545 18918 18918 1 9606 Homo sapiens 0.07274359848656786 HSSTPNSSEFSR Unmodified 1334.5851 0.58510641 4241 Q8N9Q2 SREK1IP1 Protein SREK1IP1 yes yes 0 0 0 8 0 1 28.775 28.801 3 0.0024208 5224 20230619_1888_Aki_TMTPro18x_K_F8 72.958 68.2 2355.1 1996.2 3492.1 2799.9 2330 3408.2 3167.3 1787.9 3437.8 844.85 3477.4 2126 2349.5 2132.4 1609.9 2362 2965.6 1925.2 2186.9 1833.8 3432.3 2768.8 2537.9 3360.3 3152.2 1920.1 3472 951.31 3505.5 2110.2 2400.6 2208.8 1728.8 2343.7 2817.1 1837 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 658900 12289 4241 11622 23546 18919 18919 1 9606 Homo sapiens -0.06880273694946482 HSSVYPTQEELEAVQNMVSHTER Unmodified 2670.2344 0.23439299 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;Q59GP7;K7EKJ9;K7ERM6;K7EJ09;K7ER69;K7EM82;K7ENK6 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 6 0 1 56.645 56.717 4 4.0829E-09 16757 20230619_1886_Aki_TMTPro18x_K_F6 119.02 106.36 18685 11038 15267 14919 15463 19285 18527 15677 23107 15583 18077 16997 15502 14809 19401 20411 17538 14844 17221 10152 15798 14802 16162 19078 18632 16270 23047 15818 18672 17133 16101 15625 19563 20110 16780 14167 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207080000 12290 3823 11623 23547 18920 18920 1 9606 Homo sapiens -0.03391483557288666 HSVAVMTVR Oxidation (M) 1014.528 0.52804923 4420 Q9BRS2;Q9H2L9 RIOK1 Serine/threonine-protein kinase RIO1 yes no 0 1 0 8 0 1 28.455 28.48 3 0.0067497 5122 20230619_1888_Aki_TMTPro18x_K_F8 70.363 56.244 12049 9994.7 13019 15053 16954 17683 15718 14563 18090 12454 10122 13809 12988 14344 14586 12127 14886 13477 11150 9189.7 13216 14809 17257 17606 15984 15043 17974 12758 10920 13959 13268 14647 14805 12309 14230 12791 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5203200 12291 4420 11624 23548 18921 18921 2769 1 9606 Homo sapiens 0.021366322856579245 HSVGVVIGR Unmodified 922.53485 0.53484916 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 3.5 2.69 1 1 1 1 34.146 34.175 3 2.2752E-12 7619 20230619_1880_Aki_TMTPro18x_K_F1 205.36 161.01 160000 121390 170870 163730 177250 189230 199810 196810 222180 210270 267170 277750 247370 216790 222830 204930 273120 254580 147960 111510 172740 162230 184130 189570 200890 200910 226730 213810 271170 276720 251980 225000 229680 209000 260700 241340 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 525700000 12292 3197 11625 23549;23550;23551;23552 18922;18923;18924;18925 18922 4 9606 Homo sapiens 0.07048313228528968 HSVIPPAAR Unmodified 946.53485 0.53484916 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 0 8 0 1 30.592 30.608 3 0.0010287 5814 20230619_1888_Aki_TMTPro18x_K_F8 96.668 58.941 16838 12385 15534 19151 24094 29213 21687 23771 34914 16612 18980 18514 15518 16259 15320 14249 18833 16888 15550 11397 16044 18896 24335 28630 22396 24456 34121 17273 20063 18632 15970 16728 15768 14507 17972 16020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31425000 12293 4666 11626 23553 18926 18926 1 9606 Homo sapiens 0.05944313228519604 HSVPLPTELSSEAK Unmodified 1493.7726 0.77257283 4136 Q6UXV4 APOOL MICOS complex subunit MIC27 yes yes 0 0 0 5.5 0.5 1 1 46.787 46.867 3 7.5859E-07 12474 20230619_1886_Aki_TMTPro18x_K_F6 130.24 117.36 85507 68192 80830 102020 102760 102550 107420 107590 125410 107790 125030 118080 118490 101720 103770 103100 135940 123230 79018 62704 82955 100190 105060 103760 108580 109590 126660 109260 127940 118850 120480 105560 107540 104730 129670 116870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96027000 12294 4136 11627 23554;23555 18927 18927 1 9606 Homo sapiens 0.045437447897711536 HSYCNLK Unmodified 920.41744 0.41743614 4427 Q9BSK0 MARVELD1 MARVEL domain-containing protein 1 yes yes 0 0 0 8 0 1 34.448 34.44 3 0.0011273 7290 20230619_1888_Aki_TMTPro18x_K_F8 151.29 99.72 37101 21005 41618 42439 45075 48116 48761 47037 51293 33376 31226 31244 31932 29834 37484 21090 53122 41481 34275 19427 41961 41137 46612 48160 49016 47768 51266 34431 33036 31745 32882 30389 38780 22527 50595 39225 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34995000 12295 4427 11628 23556 18928 18928 1 9606 Homo sapiens -0.04595587702601733 HTAAPTDPADGPV Unmodified 1247.5782 0.57823012 14 A0A024QYW3;Q04941 PLP2 Proteolipid protein 2 yes no 0 0 0 2 0.707 1 2 1 37.332 37.37 2 1.1115E-18 8632 20230619_1881_Aki_TMTPro18x_K_F2 237.08 217.6 27767 20172 20320 27319 33210 33360 32393 31736 36448 28210 31412 29498 35985 28803 33057 33872 33861 31694 25600 18535 21498 27064 33448 33239 32813 32438 36683 28758 32656 29888 36431 30007 33713 33837 32376 30134 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 501010000 12296 14 11629 23557;23558;23559;23560 18929;18930 18930 2 9606 Homo sapiens -0.035655865755416016 HTAEEYAALLTK Unmodified 1345.6878 0.68778057 1495 I3L3Z0;I3L1Y8;A0A384P622;Q9HBL8;I3L543;I3L3I6 NMRAL1 NmrA-like family domain-containing protein 1 yes no 0 0 0 6 0 1 52.506 52.583 3 0.0021973 15036 20230619_1886_Aki_TMTPro18x_K_F6 60.161 45.285 34064 28731 30778 36143 35891 37303 35227 35473 51030 41336 39259 40482 45085 34563 40022 44570 44590 45182 31479 26362 31644 35899 36877 37600 36035 36525 50612 41460 41092 40932 45573 36399 41063 44648 42623 42905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12634000 12297 1495 11630 23561 18931 18931 1 9606 Homo sapiens 0.02876419043786882 HTAMVSWGGVSIPNSPFR Unmodified 1941.952 0.95195096 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 0 6 0 1 58.01 58.079 3 5.3588E-14 17326 20230619_1886_Aki_TMTPro18x_K_F6 160.64 141.9 30848 27705 31671 31615 31670 37127 37022 36399 35886 30494 36346 30630 31893 27848 36648 32547 31969 30527 28548 25391 32110 31691 33042 37106 36989 37076 36611 31145 37052 31028 32915 29060 36901 32536 30623 29022 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33742000 12298 3484 11631 23562 18932 18932 1 9606 Homo sapiens 0.018653058060635885 HTDDEMTGYVATR Oxidation (M) 1510.6358 0.63582135 744 A0A024RD15;Q16539-5;Q16539-3;Q16539-4;Q16539;B4E0K5;L7RSM2;Q16539-2;Q15454;E7EX54 MAPK14 Mitogen-activated protein kinase;Mitogen-activated protein kinase 14 yes no 0 1 0 1.5 0.5 1 1 30.47 30.503 3 0.0012448 6200 20230619_1880_Aki_TMTPro18x_K_F1 77.192 63.513 18283 11209 20284 18968 25953 26985 26004 26977 29481 23916 22319 23832 24086 22158 21395 18331 23555 25583 16895 10336 20517 18618 26492 26666 26318 27463 29547 24341 23325 24121 24413 22716 21905 18902 22530 24215 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 25535000 12299 744 11632 23563;23564 18933;18934 18933 447 2 9606 Homo sapiens -0.09907112432279064 HTDEEFLK Unmodified 1017.4767 0.47672516 4493 Q9H0C8;F8SNU7;H7C2I8;E9PC05 ILKAP;ILKAP3 Integrin-linked kinase-associated serine/threonine phosphatase 2C yes no 0 0 0 3 0 1 41.294 41.353 3 0.010304 10220 20230619_1882_Aki_TMTPro18x_K_F3 74.301 53.972 26994 20418 26562 28610 28252 29000 28381 28028 37197 29390 36587 31718 34212 27472 31496 36104 42748 37514 24946 18765 27052 28218 29213 29273 28884 28745 37335 29718 37425 31985 34866 28945 32719 36205 40756 35636 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44954000 12300 4493 11633 23565 18935 18935 1 9606 Homo sapiens -0.03131413207427158 HTDPVPDPR Unmodified 1032.4989 0.49885759 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 0 0 2.5 0.5 1 1 30.299 30.379 3 0.00076765 5839 20230619_1881_Aki_TMTPro18x_K_F2 90.906 76.239 98629 71880 100930 90532 100270 105030 109030 113650 129710 112060 137950 143690 153450 113650 110630 126930 141860 123150 91155 65992 102260 90134 104410 105310 110110 115450 131220 114300 141810 143420 153980 118960 115050 127100 135300 117080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 236740000 12301 1076 11634 23566;23567 18936;18937 18936 2 9606 Homo sapiens -0.0160918873900755 HTEAPLYVVDKPVPEESEGPGSPPPYK Unmodified 2918.4338 0.4338043 3847 Q13308;Q13308-6;Q13308-2;Q13308-5;Q13308-3 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 1 5.5 0.5 1 1 51.367 51.443 4 4.2758E-05 14402 20230619_1885_Aki_TMTPro18x_K_F5 80.293 61.249 11546 7900.8 10902 8096.9 8504.8 9132.8 11148 9211.1 9270.9 13791 13980 17417 14999 12376 13792 13496 15004 19537 10660 7241.8 11075 8186.8 9087.2 9164.8 11034 9532.5 9756.8 13789 14193 17324 15214 13001 14112 13882 14375 18476 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88816000 12302 3847 11635 23568;23569 18938 18938 1 9606 Homo sapiens 0.05132474942183762 HTEMITTLK Oxidation (M) 1088.5536 0.55359527 3306 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 1 0 6.5 0.5 1 1 38.568 38.65 3 0.0015429 8764 20230619_1887_Aki_TMTPro18x_K_F7 88.496 61.397 50589 38809 50657 53878 56147 54223 54314 49091 64779 55002 66492 71898 61245 58878 65866 65639 70460 67785 46761 35660 51543 53162 57787 54702 55194 50705 65429 55808 67961 71771 62944 61476 67147 65983 67353 64370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90387000 12303 3306 11636 23570;23571 18939;18940 18940 1932 2 9606 Homo sapiens 0.012860620173796633 HTEMITTLKK Unmodified 1200.6536 0.65364367 3306 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 1 2 0 1 41.812 41.889 4 0.00055919 10706 20230619_1881_Aki_TMTPro18x_K_F2 107.24 93.037 85856 76282 104950 83322 88584 91603 81713 81636 81193 96356 114440 77559 71253 69194 109800 61943 72597 50308 79578 69885 104610 83754 93011 91829 82894 84476 84083 95992 113770 79358 75909 71227 108650 61900 69666 47988 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62777000 12304 3306 11637 23572 18941 18941 1 9606 Homo sapiens 0.061342993511971144 HTENTFSRPGGR Unmodified 1357.6487 0.64870972 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;C9J813;Q6PJM5;B4E3I0 CALD1 Caldesmon yes no 0 0 1 7.67 0.471 1 2 23.113 23.174 3;4 5.1285E-05 3670 20230619_1887_Aki_TMTPro18x_K_F7 102.87 75.774 158820 117880 162550 167250 273500 238600 213870 218220 248830 169590 211800 221350 203180 181210 205440 183690 250210 192690 146800 108360 166440 165730 273220 235480 220110 222980 249840 175710 218770 221010 207870 188300 211180 185170 238570 183130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 172180000 12305 3798 11638 23573;23574;23575 18942;18943 18942 2 9606 Homo sapiens -0.015808684672265372 HTEPNETTPLTEPEK Unmodified 1721.8108 0.81080883 806 P13591-1;A0A087WTF6;P13591;A0A087WV75;A0A087WWD4;A0A087WX77;A0A087WWJ5;B4DSQ7 NCAM1 Neural cell adhesion molecule 1 no no 0 0 0 2 0.816 1 1 1 39.41 39.45 3 0.00043204 9386 20230619_1882_Aki_TMTPro18x_K_F3 87.447 76.177 19071 15729 16189 27585 21872 23132 26693 22995 30895 28588 31178 32736 26235 23511 25427 31341 30553 36437 17614 14492 16845 26787 22399 23714 26741 23677 31232 28719 31768 32725 26907 24970 26189 31632 29224 34532 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190280000 12306 806 11639 23576;23577;23578 18944 18944 1 9606 Homo sapiens -0.021224140862386776 HTFGLVQSK Unmodified 1015.5451 0.5450795 440 K7ELQ9;A0A024R7D3;Q6UW68;K7ER05;K7EJQ9 TMEM205;UNQ501 Transmembrane protein 205 yes no 0 0 0 3 0 1 41.835 41.897 3 0.0020612 10392 20230619_1882_Aki_TMTPro18x_K_F3 90.05 60.307 178940 247110 171250 165590 172940 195740 190600 180950 242470 187510 195570 179230 208500 168710 196000 218160 244110 203890 166110 225330 174600 174690 180110 195630 192720 186060 242050 189050 203320 182110 211820 177020 202280 217580 232820 193960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123440000 12307 440 11640 23579 18945;18946 18946 2 9606 Homo sapiens 0.03792876163095116 HTFLNIAEHFEK Unmodified 1484.7412 0.74121312 63 B3KPN7;A0A024QZT2;Q96KP1;B4DZI7 EXOC2 Exocyst complex component 2 yes no 0 0 0 8 0 1 52.252 52.329 4 0.00028589 14565 20230619_1888_Aki_TMTPro18x_K_F8 99.011 78.426 71330 56249 62100 75584 74231 85700 70264 73472 82727 81317 88848 94876 89123 77904 84183 104170 94085 95822 65872 51661 64114 74834 76110 85591 71481 76120 83830 82179 90925 95146 90738 82272 86350 103730 89936 91094 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56962000 12308 63 11641 23580 18947 18947 1 9606 Homo sapiens 0.018232165463132333 HTGAVLK Unmodified 724.42317 0.42317345 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 7.5 0.5 1 1 32.908 32.951 3 0.0014589 6699 20230619_1888_Aki_TMTPro18x_K_F8 143 92.965 146830 65820 215600 182520 320920 309490 242280 304920 260110 73863 118500 106710 82255 83389 197430 46180 126940 84425 135920 61332 214630 176250 322350 302980 249490 305340 257750 88259 126840 106210 90673 84790 193980 49659 121840 79938 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104050000 12309 3384 11642 23581;23582 18948 18948 1 9606 Homo sapiens 0.04993878871380275 HTGCCGDNDPIDVCEIGSK Unmodified 2132.8561 0.85613759 3922 Q15181;V9HWB5;Q5SQT6 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 0 0 3.29 1.03 2 2 2 1 46.421 46.49 3;4 2.6492999999999997E-19 12525 20230619_1882_Aki_TMTPro18x_K_F3 175.51 165.76 539680 447140 497460 534240 409720 518540 421940 403390 599580 720500 680550 670510 831170 701220 499830 858230 844340 792440 498740 410090 507700 532110 433850 522930 430530 428740 604810 709820 700430 684110 828030 730640 535050 855160 804170 753550 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3018999999.9999995 12310 3922 11643 23583;23584;23585;23586;23587;23588;23589 18949;18950;18951;18952;18953 18950 5 9606 Homo sapiens -0.16497622949327706 HTGPGILSMANAGPNTNGSQFFICTAK Oxidation (M) 2806.3167 0.31668283 2036;3735 P62937;A8K486;V9HWF5;B2RE56;Q71V99;F8WE65;C9J5S7;P62937-2;A0A7I2V4V1 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase no no 0 1 0 3.67 0.471 1 2 52.236 52.274 3;4 2.9257E-10 16325 20230619_1883_Aki_TMTPro18x_K_F4 120.42 109.29 122970 104710 114460 113730 108890 135210 136780 137820 163780 221650 187760 221640 249550 177190 210000 317510 234070 269760 113670 95942 116920 114470 114460 135160 137150 142790 166640 219390 194440 223540 250640 191750 216180 313760 223970 256600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 396550000 12311 2036;3735 11644 23590;23591;23592 18954;18955;18956 18955 1276 3 9606 Homo sapiens -0.014222847500150237 HTGPGILSMANAGPNTNGSQFFICTAK Unmodified 2790.3218 0.3217682 2036;3735 P62937;A8K486;V9HWF5;B2RE56;Q71V99;F8WE65;C9J5S7;P62937-2;A0A7I2V4V1 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase no no 0 0 0 4.5 0.5 1 1 59.371 59.399 3 1.1189E-28 17613 20230619_1885_Aki_TMTPro18x_K_F5 171.78 156.36 53166 46572 59161 54371 46215 67051 54951 59521 57727 68948 68235 77456 71393 62303 63055 73152 71809 87595 49228 42695 59392 54454 49370 66632 55042 61561 59127 69404 69714 77689 72379 65354 64810 74111 68731 82988 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 127390000 12312 2036;3735 11644 23593;23594 18957;18958;18959 18958 3 9606 Homo sapiens -0.001779808873834554 HTGPITCLQFNPK Unmodified 1511.7555 0.75548298 223 Q6UXN9;A0A024R333 WDR82;TMEM113 WD repeat-containing protein 82 yes no 0 0 0 3 0 1 47.985 48.065 3 3.4011E-06 13266 20230619_1882_Aki_TMTPro18x_K_F3 132.47 112.63 356750 278730 319310 304990 413140 394090 423550 381370 451660 369190 352720 336390 372580 301130 340820 387550 401720 395230 329500 255480 328780 307200 421540 391700 427090 390150 454500 372940 367350 341930 378130 316500 350740 388340 383730 375330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 638240000 12313 223 11645 23595 18960 18960 1 9606 Homo sapiens 0.020075457029406607 HTGPNSPDTANDGFVR Unmodified 1683.7601 0.76011066 1427;1404 P31943;G8JLB6;A0A384MEJ3;E9PCY7;D6RBM0;D6RIU0;D6RIT2;D6R9T0;D6RIH9;D6RFM3;E5RGV0;D6RJ04;D6RAM1;D6RDU3;E7EQJ0;E5RGH4;H0YAQ2;A0A384MDT2;P55795 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 0 0 4.5 1.71 1 1 1 1 1 1 34.328 34.391 3 3.8686E-78 7274 20230619_1882_Aki_TMTPro18x_K_F3 287.42 253.03 94449 74378 89209 94309 97974 111260 107460 105180 114230 112240 124740 123590 129330 101480 108900 122530 133810 129040 87274 68269 91231 93823 101350 111060 108020 108060 116410 113390 127670 124220 130830 106570 112540 123120 127760 122510 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 5535100000 12314 1427;1404 11646 23596;23597;23598;23599;23600;23601 18961;18962;18963;18964;18965;18966;18967 18962 7 9606 Homo sapiens -0.054418986206201225 HTIEMIEK Unmodified 999.50592 0.5059168 4297 Q92576-2;Q92576;E7EVH3;E7ER40;B4DQ09 PHF3 PHD finger protein 3 yes no 0 0 0 4 0 1 41.225 41.268 3 0.095646 10056 20230619_1883_Aki_TMTPro18x_K_F4 39.018 12.899 53695 42093 50537 51802 67388 65579 63126 57821 74992 59561 66692 60402 60549 56401 60998 70575 67594 64531 49613 38624 51852 51697 68500 65114 64236 59659 75349 60173 68510 61197 62058 59028 62437 70331 64589 61367 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101600000 12315 4297 11647 23602 18968 18968 1 9606 Homo sapiens 0.0061440781720421 HTIQVYR Unmodified 915.49265 0.49265 4328 Q96BN8;H0Y9T0 OTULIN Ubiquitin thioesterase otulin yes no 0 0 0 5.33 3.09 1 1 1 31.509 31.544 3 0.00039666 6609 20230619_1880_Aki_TMTPro18x_K_F1 168.74 149.26 77295 58308 73359 71804 96762 96697 97382 92387 113480 86408 90099 82477 85925 71626 80410 85758 105390 78012 71407 53512 75190 71746 98613 95811 98601 94500 113690 87582 93308 83574 87597 74989 83258 85514 100410 74279 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56462000 12316 4328 11648 23603;23604;23605 18969;18970 18969 2 9606 Homo sapiens 0.03152337820131379 HTLADNFNPVSEER Unmodified 1627.759 0.75904803 3481 P20645;Q6I9U3;Q53GY9;Q96AH2;H0YGT2 M6PR Cation-dependent mannose-6-phosphate receptor yes no 0 0 0 3.5 0.5 1 1 43.741 43.798 3 4.1138E-09 11271 20230619_1882_Aki_TMTPro18x_K_F3 163.62 150.85 105190 99138 103300 127500 110190 135880 140910 119340 133080 146700 159900 129860 154250 121400 126060 138730 147400 159840 97340 90950 105390 126480 114790 136350 140000 123870 137110 146280 162320 132390 156190 126540 129930 140270 140910 151550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 331680000 12317 3481 11649 23606;23607 18971;18972 18971 2 9606 Homo sapiens -0.029721129894824116 HTLDGAACLLNSNK Unmodified 1512.7355 0.73547582 4826 S4R3N1;B4DM50;A8K012;A0A024R3X9;Q9Y3A3-2;Q9Y3A3-3;Q9Y3A3 HSPE1-MOB4;MOB4;PREI3 MOB-like protein phocein yes no 0 0 0 1 0 1 48.055 48.055 3 1.5507E-07 13585 20230619_1880_Aki_TMTPro18x_K_F1 142.77 115.36 48912 36495 45530 46819 44934 48643 51176 49084 47995 53388 50632 47403 56364 46732 46421 57532 59902 56062 45177 33509 46530 46462 46869 49061 51151 50233 49224 53532 52053 48393 56875 48812 48182 57526 57157 53277 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51988000 12318 4826 11650 23608 18973 18973 1 9606 Homo sapiens -0.00038250027637332096 HTLGHLLSLDSYR Unmodified 1510.7892 0.78922595 2219 B4DGN8;B2R5M9;Q02809;Q02809-2;B4DHT1 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes no 0 0 0 3 0 1 47.365 47.444 4 4.1188E-06 13004 20230619_1882_Aki_TMTPro18x_K_F3 135.02 126.63 15590 9236.1 11937 17138 13581 16212 17042 19254 19933 16449 15343 17686 16629 15208 19638 19704 18144 17997 14363 8528.9 12490 16629 14091 16515 17069 19381 19952 16812 16040 17815 17083 15998 19835 19634 17373 17112 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46206000 12319 2219 11651 23609 18974 18974 1 9606 Homo sapiens 0.05426290466380124 HTLNPEETSSVVR Unmodified 1467.7318 0.73177065 4053 Q5SRE5;Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog yes no 0 0 0 3 0 1 35.948 36.005 3 5.6439E-06 7987 20230619_1882_Aki_TMTPro18x_K_F3 98.942 80.68 25572 19196 24838 26571 35412 34372 33116 28082 38429 29973 33968 32296 28619 28135 31426 26100 37094 31772 23628 17640 25459 26317 35853 34027 33664 29186 38643 30287 34822 32531 29547 29043 32186 26600 35399 30137 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40014000 12320 4053 11652 23610 18975 18975 1 9606 Homo sapiens 0.016614034700978664 HTLNQIDSVK Unmodified 1153.6091 0.60913632 2780 CON__P12763 yes yes 0 0 0 6.5 0.957 1 2 2 1 40.302 40.369 2;3 9.1999E-08 9370 20230619_1887_Aki_TMTPro18x_K_F7 189.57 147.7 + 105650 199870 231410 114280 971200 966000 513840 493920 1089300 308340 561330 919110 292760 378110 534090 422600 640450 848220 99455 182000 235020 133560 938030 901630 561130 531630 1053300 341870 591510 885690 320180 409690 544200 448010 613190 800370 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 11389000000 12321 2780 11653 23611;23612;23613;23614;23615;23616 18976;18977;18978 18977 3 9606 Homo sapiens 0.038476115293633484 HTLSYVDVGTGK Unmodified 1275.6459 0.64591575 21 A0A024QZ30;P31040;P31040-2;D6RFM5;B3KT34;P31040-3;B3KYA5;B4DNB2 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 8 0 1 43.984 44.003 3 9.6976E-05 11115 20230619_1888_Aki_TMTPro18x_K_F8 111.52 88.607 33153 28415 34549 33711 37705 38650 36773 39605 49354 39882 36022 35413 41688 31528 38638 39120 42880 41694 30676 26055 35017 33688 38883 38741 37523 40385 49031 40173 37831 36023 42207 33082 39578 39332 40978 39578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32792000 12322 21 11654 23617 18979 18979 1 9606 Homo sapiens 0.019118633552807296 HTLTQIK Unmodified 839.4865 0.48650199 765;2549 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2;B4DN39 CCT6A T-complex protein 1 subunit zeta no no 0 0 0 1.5 0.5 1 1 36.981 37.011 3 3.0842E-10 8485 20230619_1881_Aki_TMTPro18x_K_F2 237.05 55.565 1218300 921940 1035600 1085700 1521600 1706300 1400600 1321500 2080400 343580 353460 261790 299320 208250 670670 271290 377110 191030 1124600 845730 1074900 1090900 1540700 1669100 1438100 1350400 2006400 401010 441590 268790 325210 220070 656950 268460 362370 182970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1053299999.9999999 12323 765;2549 11655 23618;23619 18980;18981 18981 2 9606 Homo sapiens 0.06033819588617462 HTNFVEFR Unmodified 1048.509 0.50902834 3192 M0R0N4;M0QYZ2;P53680;M0QZ21 AP2S1 AP-2 complex subunit sigma yes no 0 0 0 7 0.816 1 1 1 39.391 39.438 3 0.0001081 9016 20230619_1887_Aki_TMTPro18x_K_F7 165.26 129.82 223870 152030 209980 232350 187800 202390 213650 214210 260170 242340 259500 245890 261760 216180 232700 264140 269070 217050 206680 139920 214240 227570 197580 207140 215430 218850 262330 243540 266260 248530 265680 226460 239300 261980 256730 206850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 305330000 12324 3192 11656 23620;23621;23622 18982 18982 1 9606 Homo sapiens -0.013285810137631415 HTNPIVENGQTHPCQK Unmodified 1858.8744 0.87442892 434 E9PFH4;B2R6H7;A0A024R794;Q9Y5L0-3;Q9Y5L0;B3KMX1;B3KM69;C9J7E5;Q9Y5L0-5;Q9Y5L0-1 TNPO3 Transportin-3 yes no 0 0 0 6.5 0.5 1 1 32.142 32.207 4 2.4039E-11 6602 20230619_1886_Aki_TMTPro18x_K_F6 163.8 140.89 15317 11380 18762 18377 20242 24982 20721 17345 23572 24258 22646 25592 23423 21471 22081 25477 27029 26682 14182 10477 18797 18055 20934 24570 20948 18440 23830 24194 23335 25763 23834 22490 22768 25596 25811 25332 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 16274000 12325 434 11657 23623;23624 18983 18983 1 9606 Homo sapiens -0.020653321301324468 HTNYTMEHIR Oxidation (M) 1316.5932 0.59316868 387;1069 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;B4DFY0;B3KUX9;A1L0V1;B7Z2W3;A0A494C1A0;P35609;P35609-2;A0A804HI95;H0YJW3;H7C5W8;H0YJ11;B7Z2N5;Q5ZEZ4;B7Z4K1;Q59FD9;B7Z4P6;A0A494C060;B7Z4P8;F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3;A0A0S2Z3X3;A0A0S2Z3C0 ACTN1;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4 no no 0 1 0 5.5 0.5 1 1 23.174 23.228 4 0.00025802 3841 20230619_1885_Aki_TMTPro18x_K_F5 122.57 108.8 255380 198350 219570 233700 269610 243060 292580 283860 338480 133120 132400 101370 120920 86979 191810 140230 122930 71417 235790 181930 226820 233330 276390 246140 294860 283170 333330 141960 145010 104160 127080 92995 189690 136410 117930 68750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 291210000 12326 387;1069 11658 23625;23626 18984 18984 245 1 9606 Homo sapiens -0.05246417979196849 HTNYTMEHIR Unmodified 1300.5983 0.59825406 387;1069 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;B4DFY0;B3KUX9;A1L0V1;B7Z2W3;A0A494C1A0;P35609;P35609-2;A0A804HI95;H0YJW3;H7C5W8;H0YJ11;B7Z2N5;Q5ZEZ4;B7Z4K1;Q59FD9;B7Z4P6;A0A494C060;B7Z4P8;F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3;A0A0S2Z3X3;A0A0S2Z3C0 ACTN1;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4 no no 0 0 0 6 0.816 1 1 1 29.713 29.785 4 7.4819E-07 5706 20230619_1886_Aki_TMTPro18x_K_F6 141.08 113.66 79012 67870 83362 77005 101650 104260 99347 108770 117440 60942 71563 68745 56328 53861 85716 60136 76153 63257 73116 62208 84553 77424 104020 103470 100850 109470 116590 64465 74958 68977 59429 56352 85970 60595 72866 60096 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 158990000 12327 387;1069 11658 23627;23628;23629 18985;18986;18987;18988 18987 4 9606 Homo sapiens -0.04002114116565281 HTPLVEFEEEESDKRESE Unmodified 2188.976 0.97603626 1146 Q68D27;E9PHF7;A0A0S2Z693;Q96RQ3 DKFZp686B20267;MCCC1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes no 0 0 2 1 0 1 47.219 47.219 4 1.557E-18 13207 20230619_1880_Aki_TMTPro18x_K_F1 180.81 169.49 42541 34656 42188 43868 43457 53165 42702 43548 59225 55154 60468 61435 65210 65232 48319 72031 72676 74440 39333 31805 42917 43658 45091 52822 43624 45462 59445 55350 62168 62235 65694 67480 50907 72341 69313 70672 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43965000 12328 1146 11659 23630 18989 18989 1 9606 Homo sapiens -0.07089271807899422 HTPLYER Unmodified 914.46102 0.46101552 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;Q9NZB2-5;Q9NZB2-2;A0A0C4DH52;Q5T035 FAM120A;C9orf129 Constitutive coactivator of PPAR-gamma-like protein 1;Putative uncharacterized protein C9orf129 yes no 0 0 0 4.5 0.5 1 1 30.16 30.231 3 0.0063847 5659 20230619_1883_Aki_TMTPro18x_K_F4 95.352 81.146 86083 74577 82117 83643 107880 117700 102180 105340 137620 79515 96948 94034 92305 78682 90036 90907 99799 87690 79597 68346 84148 84191 109920 116160 104410 107750 136370 82307 101160 94338 94276 82295 92133 90988 95308 83367 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104260000 12329 1839 11660 23631;23632 18990;18991 18990 2 9606 Homo sapiens 0.0003634506618936939 HTPYGNQTDYR Unmodified 1350.5953 0.59527717 1602 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70 LDB1 LIM domain-binding protein 1 yes no 0 0 0 4.5 0.5 1 1 30.636 30.708 3 5.11E-24 5928 20230619_1885_Aki_TMTPro18x_K_F5 228.12 191.78 28800 22305 33807 30387 34885 38415 31133 33113 42126 41713 48182 46302 46634 44710 40698 44603 63390 49650 26660 20490 33916 30128 36056 38110 31973 34415 42535 41850 49058 46745 47420 46150 42755 45101 60336 47154 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136880000 12330 1602 11661 23633;23634 18992;18993 18993 2 9606 Homo sapiens -0.06599665969702073 HTQENCETWGVNGETGTLVDMK Unmodified 2505.09 0.090036934 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 4.5 0.5 1 1 52.137 52.161 3 7.8081E-09 15000 20230619_1883_Aki_TMTPro18x_K_F4 116.94 112.42 28815 26978 32117 33825 18488 33757 27344 31404 36936 42173 36800 32377 40379 34674 34350 40142 38047 41831 26694 24744 32170 33595 20634 34053 27384 32520 37111 41748 37882 33397 40815 35996 35273 40329 36394 39700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161630000 12331 2435 11662 23635;23636 18994;18995 18994 2 9606 Homo sapiens -0.102304483089938 HTQLEQMFR Oxidation (M) 1204.5659 0.56589129 1128 A0A0S2Z5I7;Q9Y3A5;A0A8V8TLA5;A0A8V8TLR8;A0A8V8TMS1 SBDS Ribosome maturation protein SBDS yes no 0 1 0 6 0 1 34.519 34.566 3 0.00047172 7456 20230619_1886_Aki_TMTPro18x_K_F6 108.93 85.372 33247 19368 29612 28281 36554 34137 28870 36088 45596 27442 33166 39448 34120 33310 38958 32363 34997 35178 30660 17829 30464 27906 37210 34122 30086 36481 44954 28592 34707 39281 35053 34485 39274 32724 33524 33381 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30088000 12332 1128 11663 23637 18996 18996 702 1 9606 Homo sapiens -0.028209015195670872 HTQLEQMFR Unmodified 1188.571 0.57097667 1128 A0A0S2Z5I7;Q9Y3A5;A0A8V8TLA5;A0A8V8TLR8;A0A8V8TMS1 SBDS Ribosome maturation protein SBDS yes no 0 0 0 7.5 0.5 1 1 42.689 42.728 3 1.8616E-05 10574 20230619_1888_Aki_TMTPro18x_K_F8 161.17 125.93 41339 33713 42374 45262 42187 41853 46103 49431 51557 45403 48374 46058 52171 40056 46382 48639 47053 46226 38232 30959 42968 44720 43900 42760 46444 49864 52075 46117 49932 46544 52818 41987 47315 48602 45008 43934 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151340000 12333 1128 11663 23638;23639 18997 18997 1 9606 Homo sapiens -0.01576597656935519 HTQWGIDFLER Unmodified 1400.6837 0.68369824 4057 Q5T0N5-3;Q5T0N5-4;Q5T0N5-2;Q5T0N5-5;Q5T0N5 FNBP1L Formin-binding protein 1-like yes no 0 0 0 7 0 1 54.544 54.608 3 4.6617E-09 15588 20230619_1887_Aki_TMTPro18x_K_F7 147.96 110.41 41222 35196 42317 45401 37177 44513 45765 43633 57186 58988 47840 53313 58067 48527 53072 63288 52616 58811 38136 32301 42843 44997 39292 45053 45996 45055 57285 58624 50013 54193 58699 51001 54090 63081 50390 55884 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66258000 12334 4057 11664 23640 18998 18998 1 9606 Homo sapiens -0.000616256592593345 HTQWGIDILEK Unmodified 1338.6932 0.6932003 1849 B7ZL14;A0A994J3U5;A0A994J4A3;H0Y7W6;B7ZL13;A0A994J6U4;A0A994J3V8;A0A8V8TQ35;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 FNBP1 Formin-binding protein 1 yes no 0 0 0 7 0 1 55.712 55.773 3 0.0094637 16114 20230619_1887_Aki_TMTPro18x_K_F7 55.291 43.444 61977 50506 58531 57826 73184 83471 65643 62854 106280 62559 60635 55300 67389 48135 66722 63209 59180 51179 57280 46305 59960 58132 74768 81988 67830 65617 104040 63144 64617 56252 68480 50717 67420 62624 56640 48767 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72107000 12335 1849 11665 23641 18999 18999 1 9606 Homo sapiens 0.037401426262931636 HTQWGLDLLDR Unmodified 1352.6837 0.68369824 1990 M0R2H7;A7VJC9;W4VSQ9;Q15642-5;Q15642-4;Q15642-2;Q15642-3;Q15642 TRIP10;STP Cdc42-interacting protein 4 yes no 0 0 0 6.5 0.5 1 1 54.02 54.092 3 9.2621E-05 15390 20230619_1887_Aki_TMTPro18x_K_F7 108.98 103.27 28294 24311 36441 34328 32006 34731 33451 34600 35060 41721 43208 43364 45319 37064 37772 44408 43619 47057 26233 22333 36257 33850 33604 35083 33727 35548 35985 41815 44036 43731 45815 38840 38903 44636 41701 44654 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42423000 12336 1990 11666 23642;23643 19000 19000 1 9606 Homo sapiens 0.021463743407593938 HTVDDGLDIR Unmodified 1139.5571 0.55710075 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3;B3KM30 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 2 0.816 1 1 1 38.118 38.157 3 1.2588E-07 8964 20230619_1881_Aki_TMTPro18x_K_F2 169.99 133.6 570490 291490 375110 408010 402560 510500 420430 450940 641410 502710 574030 597250 686070 558170 455520 629750 733860 682240 524780 268400 397930 403680 417960 506770 429700 466070 637820 508600 596800 600820 685830 580990 483530 634110 699100 647630 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 692930000 12337 2126 11667 23644;23645;23646 19001;19002;19003 19002 3 9606 Homo sapiens -0.007095518843698301 HTVDDGLDIRK Unmodified 1267.6521 0.65206377 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3;B3KM30 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 1 4 0.816 1 1 1 39.174 39.237 4 3.8614E-06 9238 20230619_1883_Aki_TMTPro18x_K_F4 147.62 109.91 151700 125970 123260 132920 158290 144900 119230 142090 173520 173280 184270 161430 179850 160780 131610 248290 228540 178460 140070 115400 128080 133890 160550 145700 124260 146110 174200 173120 188110 164660 181580 170360 140670 243840 217380 170430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276960000 12338 2126 11668 23647;23648;23649 19004 19004 1 9606 Homo sapiens 0.028943815867933154 HTVDQTRPGAFER Unmodified 1512.7433 0.74333839 3809 Q07954;Q59FG2 LRP1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 1 5 0 2 30.01 30.086 3;4 0.00016813 5695 20230619_1885_Aki_TMTPro18x_K_F5 107.93 86.377 17757 15301 17606 16998 30058 29778 28611 24949 31673 22512 25178 29151 26897 22139 27799 25539 28088 32333 16424 14021 18084 17197 30169 29040 28998 25754 31812 23103 26249 29044 27437 23257 28256 25997 26901 30623 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44598000 12339 3809 11669 23650;23651 19005;19006 19005 2 9606 Homo sapiens 0.0074764528415016684 HTVVVYCDR Unmodified 1147.5444 0.54442757 4281 Q8WVC6 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 0 0 0 5.5 0.5 1 1 32.996 33.055 3 4.5135E-05 6811 20230619_1885_Aki_TMTPro18x_K_F5 145.9 117.8 32940 24456 34782 41219 42193 43812 45334 39363 50732 44674 58023 64807 53896 49411 48127 45897 64349 67919 30455 22529 35332 40246 43296 43989 45678 40699 51626 45487 59047 64312 54899 51294 49922 47421 61436 64263 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84411000 12340 4281 11670 23652;23653 19007;19008 19007 2 9606 Homo sapiens -0.023442865482820707 HTVVVYCDRDTQLAR Unmodified 1831.8999 0.89991538 4281 Q8WVC6 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 0 0 1 6.5 0.5 1 1 36.171 36.235 4 1.7036E-13 7793 20230619_1887_Aki_TMTPro18x_K_F7 170.74 150.16 19954 14387 19682 22136 28620 26669 27511 27810 28260 20960 25471 27120 27496 21958 25777 18151 28972 28578 18435 13239 20164 21767 28946 26650 27819 28147 28615 21743 26369 27064 27909 22639 26373 18911 27686 27034 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93957000 12341 4281 11671 23654;23655 19009 19009 1 9606 Homo sapiens 0.017241423922996546 HVAAGTQQPYTDGVR Unmodified 1598.7801 0.78011783 173 A0A0S2Z487;A0A024R1X8;P14923;A0A0S2Z495 JUP Junction plakoglobin yes no 0 0 0 5 0.816 1 1 1 33.623 33.683 3 4.8393E-26 7105 20230619_1886_Aki_TMTPro18x_K_F6 198.23 167.74 16898 12907 19444 17039 19687 18798 19043 19479 21026 22239 24196 19590 28819 22264 20714 20950 25488 26220 15638 11853 19524 16898 20382 18897 19312 19920 21448 22249 24838 20111 28864 22834 21469 21370 24346 24845 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 182280000 12342 173 11672 23656;23657;23658 19010;19011 19011 2 9606 Homo sapiens 0.004678971100020135 HVACYGFR Unmodified 1008.46 0.45996966 790 Q05397-7;E7ESA6;Q658W2;A0A059VC25;H0YBP1;A0A8Q3WLM4;Q05397;Q05397-5;E5RH48;E5RG66;E5RGA6;E5RFW9;E5RI72;E5RH01 PTK2;DKFZp666O0110;FAK Focal adhesion kinase 1 yes no 0 0 0 2 0 1 35.526 35.582 3 0.00025263 7917 20230619_1881_Aki_TMTPro18x_K_F2 134.66 113.16 46078 39118 43636 46630 56984 53263 53517 54620 51753 36105 46784 38290 31955 29836 51521 28562 39128 34612 42598 35872 44738 46571 57954 53412 54109 55208 52557 37558 47569 38515 34019 30984 51233 29141 37525 32828 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33271000 12343 790 11673 23659 19012 19012 1 9606 Homo sapiens -0.04392192574357523 HVAEDLGK Unmodified 867.44503 0.4450311 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 3 0.816 1 1 1 37.608 37.661 3 0.00030274 8655 20230619_1882_Aki_TMTPro18x_K_F3 149.65 87.691 314080 183680 378590 391760 565590 517380 468350 500350 585630 381960 568520 608540 530450 436580 526050 298700 693200 582920 290400 170000 382000 379800 569200 513080 481490 509090 588440 399500 582720 601230 542440 449070 542850 319080 660870 551050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 832300000 12344 2908 11674 23660;23661;23662 19013;19014 19013 2 9606 Homo sapiens 0.006006388292917109 HVAEVLEYTK Unmodified 1187.6186 0.61863837 3389 Q53XC0;P05198;H0YJS4;G3V4T5 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 5.5 0.5 1 1 47.155 47.234 3 9.5711E-05 12557 20230619_1885_Aki_TMTPro18x_K_F5 113.93 91.795 159060 113200 150640 169390 165550 198040 170240 171600 242520 206450 199220 272030 308550 257160 180450 353650 353000 404020 146900 104140 154080 166720 171180 197370 173580 178100 241310 208920 211550 272700 305560 270940 196230 356040 336430 383020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 278370000 12345 3389 11675 23663;23664 19015;19016 19015 2 9606 Homo sapiens 0.0323337981487839 HVAGLWAGLR Unmodified 1078.6036 0.60359743 4756 Q9Y6C2;A0A0A0MT20;Q9Y6C2-2 EMILIN1 EMILIN-1 yes no 0 0 0 5 0 1 47.494 47.57 3 4.5646E-07 12709 20230619_1885_Aki_TMTPro18x_K_F5 140.35 104.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12346 4756 11676 23665 19017 19017 1 9606 Homo sapiens 0.06743977528208234 HVAHVLNDETQR Unmodified 1417.7062 0.7062246 2302 B2RBU0;Q99633;M0R3G1 PRPF18 Pre-mRNA-splicing factor 18 yes no 0 0 0 3.33 0.471 2 1 29.477 29.568 3;4 1.6248E-05 5456 20230619_1882_Aki_TMTPro18x_K_F3 134.3 109.45 30752 15202 28829 34848 35902 35284 30760 38206 89819 30010 42695 44052 42643 35370 31867 28793 51246 41562 28351 14102 29578 33544 36695 35684 33097 38602 86050 31329 45981 43778 43048 36437 33638 29771 48778 39376 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41193000 12347 2302 11677 23666;23667;23668 19018;19019 19019 2 9606 Homo sapiens 0.014079737383553947 HVAPDHLLQICQR Unmodified 1585.8147 0.81472919 4590 Q9NSI6-4;Q9NSI6-3;Q9NSI6-2;Q9NSI6 BRWD1 Bromodomain and WD repeat-containing protein 1 yes no 0 0 0 8 0 1 40.858 40.85 4 0.00036049 9836 20230619_1888_Aki_TMTPro18x_K_F8 95.417 79.164 25335 19724 19446 21081 21819 21878 23557 22221 31450 20695 22116 20129 23828 18406 22918 21463 23407 20830 23374 18076 20286 21199 22533 22085 23882 22643 31186 21004 23193 20413 24213 19214 23337 21491 22373 19800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12111000 12348 4590 11678 23669 19020 19020 1 9606 Homo sapiens 0.0452544171714635 HVATEYQENK Unmodified 1217.5677 0.56766543 3350 Q59HG1;O95239 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 0 0 0 3.5 0.5 1 1 34.093 34.152 3 0.00018624 7243 20230619_1882_Aki_TMTPro18x_K_F3 119.22 102.06 28547 15284 35821 34747 50631 56301 41439 40614 49711 31481 47263 50235 53867 43554 44332 24880 56357 52234 26395 14169 36001 33724 51167 54890 42568 42332 50014 32927 48909 49885 54304 44203 45794 26903 53777 49338 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37010000 12349 3350 11679 23670;23671 19021 19021 1 9606 Homo sapiens -0.03241569229953711 HVATVQNEEEAQK Unmodified 1481.711 0.71103521 554 A0A3B3ITU3;A0A024R926;Q9H246;A0A6Q8PFS2;A0A6Q8PGF2 C1orf21 Uncharacterized protein C1orf21 yes no 0 0 0 2 0.816 1 1 1 34.164 34.203 3 8.3755E-11 7286 20230619_1882_Aki_TMTPro18x_K_F3 171.32 148.52 9413.7 5609.6 10452 11510 15246 11923 14360 15168 17517 17247 22496 23635 23438 18707 19788 15473 24068 22902 8697.8 5188.1 10605 11137 15394 12102 14629 15324 17861 17507 22891 23521 23708 19301 20396 16034 22978 21678 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55806000 12350 554 11680 23672;23673;23674 19022 19022 1 9606 Homo sapiens -0.010551869095024813 HVAVICDSR Unmodified 1055.5182 0.51821282 1612 A0A6Q8PFN4;A0A6Q8PHR8;A0A6Q8PF01;A0A6Q8PGT6;P38935 IGHMBP2 DNA-binding protein SMUBP-2 yes no 0 0 0 5 0 1 32.705 32.787 3 0.0022177 6684 20230619_1885_Aki_TMTPro18x_K_F5 89.047 70.267 10596 6944.6 12848 12444 13788 15231 11280 11262 15186 12647 14740 17409 17681 13259 14739 10566 15703 15146 9803.2 6406.4 12873 12141 14181 15092 11646 11821 15230 12860 15288 17295 17798 13683 15068 10934 15012 14339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9099400 12351 1612 11681 23675 19023 19023 1 9606 Homo sapiens -0.007325557197418675 HVDNIMFENHTVADR Oxidation (M) 1812.8213 0.82133071 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;B4DG89 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 1 0 3 0 1 37.365 37.418 4 3.4619E-10 8524 20230619_1882_Aki_TMTPro18x_K_F3 146.58 136.48 13880 10046 12989 11335 15372 15837 15220 15172 16830 14151 16838 16786 15417 12401 15808 16449 16851 17487 12818 9213.4 13293 11408 15768 15662 15406 15514 17044 14438 17215 16779 15794 13154 16129 16520 16117 16596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51274000 12352 534 11682 23676 19024 19024 310 1 9606 Homo sapiens -0.05256709912828228 HVDNIMFENHTVADR Unmodified 1796.8264 0.82641609 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;B4DG89 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 0 3.5 0.5 1 1 40.803 40.854 4 5.303E-14 9978 20230619_1882_Aki_TMTPro18x_K_F3 182.35 174.63 74521 58141 77438 81689 93794 96062 90587 89404 110870 85870 113910 98682 118680 83012 87427 87347 134980 95236 68910 53427 78687 80726 96002 95890 92150 91707 111820 87413 116780 99127 119410 86464 92051 88162 128420 90517 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 164130000 12353 534 11682 23677;23678 19025;19026 19025 2 9606 Homo sapiens -0.040124060501966596 HVDSIINK Unmodified 924.50288 0.50288033 3967 Q3KQU3-4;B3KU03;Q6NX58;D3DPS3;Q3KQU3;A1L1B7;C9JIR3 MAP7D1;RPRC1 MAP7 domain-containing protein 1 yes no 0 0 0 7 0 1 41.061 41.128 3 0.04265 9742 20230619_1887_Aki_TMTPro18x_K_F7 56.721 20.536 23268 17947 20039 23227 24806 28178 26506 25967 33247 28189 32096 27038 30786 27715 25567 27064 31468 34324 21483 16478 20719 23081 25459 28062 26827 26736 33422 28354 32884 27538 31228 28542 26425 27610 30071 32514 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12689000 12354 3967 11683 23679 19027 19027 1 9606 Homo sapiens 0.03760900754718932 HVDYVVDQVVGK Unmodified 1356.7038 0.70376498 1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 0 0 0 6 0 1 51.041 51.118 3 0.015681 14398 20230619_1886_Aki_TMTPro18x_K_F6 62.924 22.908 86617 73545 76845 78670 67586 86712 89867 79977 108220 67199 65449 60297 72240 62393 76735 79413 72027 70600 80036 67376 78769 79169 71674 86913 89836 81864 107370 68493 69453 61663 73752 65183 77705 79033 68950 67155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99792000 12355 1843 11684 23680 19028 19028 1 9606 Homo sapiens 0.039681252806758494 HVEASGGSGPGDSGPSDPR Unmodified 1764.7663 0.76631825 3190 M0QY97;Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 0 0 0 1.5 0.5 1 1 29.552 29.588 3 1.066E-14 5530 20230619_1881_Aki_TMTPro18x_K_F2 157.54 145.38 3593 1274.3 1987.9 3978 5619.5 4891.6 3801 3275.9 5095.9 3879.8 4267.6 3415.5 6570.1 2769.6 4722.6 3979.1 4938.7 4942.5 3298.3 1178.5 2095.3 3796 5497.2 4838.2 3972.5 3476.6 5086.4 3879.2 4510.8 3470 6524.9 2958.1 4841.9 4034.5 4723.3 4684.2 2 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33053000 12356 3190 11685 23681;23682 19029;19030 19030 2 9606 Homo sapiens -0.0854742517969953 HVEAVAYYK Unmodified 1078.5447 0.54474515 1650 A0A7I2V697;A0A7I2V4T9;A0A7I2V2U2;A0A7I2V5Z3;A0A7I2V588;O43765;B4DEA6 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 0 0 7.5 0.5 1 1 41.774 41.808 3 0.00012108 9977 20230619_1887_Aki_TMTPro18x_K_F7 122.13 101.81 208820 147770 192840 203490 185300 198020 209450 193660 224160 259350 260270 248930 274130 216050 225750 294040 285250 266390 192810 135820 197160 200820 193690 200550 210290 199970 229150 258210 265820 252150 276960 228120 234060 292480 272220 253380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 612250000 12357 1650 11686 23683;23684 19031;19032 19031 2 9606 Homo sapiens 0.008614564432036786 HVEDLLTK Unmodified 953.5182 0.51819605 3440 P12270;P12270-2;Q58F23;Q504U6;A0PJC9 TPR Nucleoprotein TPR yes no 0 0 0 5 0.816 1 1 1 46.646 46.714 3 0.00042606 12430 20230619_1886_Aki_TMTPro18x_K_F6 141.52 88.584 106900 85204 95198 96112 117400 139710 115430 103690 166720 119510 119430 119500 125710 102620 115840 132830 121480 113310 98740 78113 98034 96735 120340 137130 117990 108850 164930 120090 125020 120760 127630 108000 118370 131860 116120 107860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 385770000 12358 3440 11687 23685;23686;23687 19033 19033 1 9606 Homo sapiens 0.039577675518899014 HVEPGNAAIR Unmodified 1062.557 0.55704117 2584 H3BPK3;B4DT01;Q16775-2;Q16775;H3BPQ4 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes no 0 0 0 4.5 1.12 1 1 1 1 30.081 30.147 3 0.00013357 5745 20230619_1885_Aki_TMTPro18x_K_F5 123.86 89.139 59716 43029 57558 65843 76400 69768 68197 72609 81645 72642 81503 88116 89823 77130 75104 73952 97192 76456 55160 39594 58962 64641 77552 70328 69663 73979 82406 73892 84025 88342 90733 79742 77829 74532 92636 72667 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 130990000 12359 2584 11688 23688;23689;23690;23691 19034;19035;19036 19036 3 9606 Homo sapiens 0.028264929062515876 HVFDMKPK Unmodified 1000.5164 0.51642191 2806 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;Q9BZE4-2;B4DHR2;Q9BZE4-3 GTPBP4 Nucleolar GTP-binding protein 1 yes no 0 0 1 2 0 1 42.096 42.176 4 0.010241 10791 20230619_1881_Aki_TMTPro18x_K_F2 93.551 73.222 166050 132040 155420 163410 157340 192660 178830 179880 185820 187080 171590 145990 176410 133410 165890 161470 159600 118750 153440 121160 158870 162840 164000 192250 179300 184790 188420 187430 176790 149690 179260 139570 168480 159480 152480 113390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81432000 12360 2806 11689 23692 19037 19037 1 9606 Homo sapiens 0.016184352622985898 HVFGESDELIGQK Unmodified 1457.7151 0.71505795 3674 V9HWK1;P60174;P60174-3;B4DUI5;Q53HE2;P60174-4;Q2QD09;U3KPZ0;U3KQF3;U3KPS5 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 4.5 1.5 1 1 2 2 1 1 47.234 47.302 3;4 8.3184E-08 13317 20230619_1883_Aki_TMTPro18x_K_F4 149.23 118.66 1161600 873370 953850 1131900 1054800 1335800 1151000 1149700 1257300 1276300 1251500 1271800 1361200 1054400 1208100 1310500 1431600 1533100 1071900 801960 989050 1124000 1092200 1330500 1158300 1190800 1275200 1283000 1289300 1283800 1378000 1109400 1244100 1324900 1368300 1453500 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2351500000 12361 3674 11690 23693;23694;23695;23696;23697;23698;23699;23700 19038;19039;19040;19041 19039 4 9606 Homo sapiens 0.0045090258415712015 HVFGQAVK Unmodified 884.48684 0.48683634 676 Q9ULV4-3;Q9ULV4-2;Q9ULV4;Q59EA2;A0A024RBI5;B3KN06;Q53G58;B4DMH3;F8VTT6;F8W1H8;F8VVB7;F8VRE9;F8VSA4;F8VUX3 CORO1C Coronin-1C;Coronin yes no 0 0 0 2 0.816 1 1 1 38.856 38.896 3 0.00028798 9258 20230619_1881_Aki_TMTPro18x_K_F2 150.84 114.64 755000 609330 569230 607270 917900 903640 841240 793370 1028600 360520 359410 238800 261980 222120 577890 330360 284940 209100 696650 558000 599110 617610 923640 889180 857470 806400 1008500 385230 395830 248260 285550 235320 564530 324300 274940 200160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1072599999.9999999 12362 676 11691 23701;23702;23703 19042 19042 1 9606 Homo sapiens 0.0399723930846676 HVFGQPAK Unmodified 882.47119 0.47118627 373 A0A024R611;P31146;Q59G88;H3BRY3;H3BTU6;H3BRJ0;H3BNA2;H3BU76;B4DJS1;H3BSL1 CORO1A Coronin;Coronin-1A yes no 0 0 0 1.5 0.5 1 1 36.755 36.784 3 0.0039913 8407 20230619_1881_Aki_TMTPro18x_K_F2 94.262 63.593 85435 65514 75415 69810 109680 104510 107700 95200 130460 81308 119670 112660 85837 92304 135060 91535 131500 116050 78891 60041 77920 70646 111080 102890 109330 97541 130940 83975 121850 112310 91163 95768 136030 93517 125740 110020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73357000 12363 373 11692 23704;23705 19043 19043 1 9606 Homo sapiens 0.025249527914184 HVFIHTGEK Unmodified 1066.556 0.55597854 2286 Q8IWK7;Q15552;Q4FD37;Q8TDH4;B2RAI2;Q9UQR1 ZNF148;tb protein Zinc finger protein 148 yes no 0 0 0 7.5 0.5 1 1 34.777 34.811 4 4.5101E-06 7415 20230619_1888_Aki_TMTPro18x_K_F8 151.44 56.591 95584 65809 87137 91025 87406 104100 104690 98192 121940 121150 130310 150700 162060 135460 94968 150770 182920 160510 88232 60494 89265 90007 91327 104100 105080 101360 123600 122130 134740 151080 161270 141050 102890 151640 174010 152430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48298000 12364 2286 11693 23706;23707 19044;19045 19045 2 9606 Homo sapiens 0.025362785373545194 HVFLTGPPGVGK Unmodified 1207.6713 0.67134264 4063 Q5TDE9;Q9BSD7;Q5TDF0 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase yes no 0 0 0 3.5 0.5 1 1 47.683 47.743 3 9.4471E-05 12948 20230619_1883_Aki_TMTPro18x_K_F4 111.86 88.629 234250 206800 238840 227670 222590 253300 235880 238910 244470 321270 308800 320670 336050 288710 283570 317060 340260 403090 216740 189470 241920 228670 232870 253940 237500 247240 251550 320120 315050 324330 339640 300540 292600 322850 325450 381710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 594820000 12365 4063 11694 23708;23709 19046 19046 1 9606 Homo sapiens 0.07581382668354308 HVGDLGNVTADK Unmodified 1224.6099 0.6098646 3372 V9HWC9;P00441;H7BYH4;X5D5A9 HEL-S-44;SOD1 Superoxide dismutase [Cu-Zn] yes no 0 0 0 4.5 1.12 1 1 1 1 42.205 42.276 3 7.3353E-25 10510 20230619_1883_Aki_TMTPro18x_K_F4 225.1 176.81 941350 668020 668130 914550 1079100 1322600 948350 874220 2031800 1240800 1563400 2279000 2287000 2264100 951870 2539100 3329300 3597600 867630 613920 709280 907600 1089000 1295700 995880 934580 1987600 1269100 1660200 2265500 2253100 2350100 1131300 2600800 3164300 3404900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 7230499999.999999 12366 3372 11695 23710;23711;23712;23713 19047;19048;19049;19050 19047 4 9606 Homo sapiens 0.006544061784325095 HVGNQQYNVTYVVK Unmodified 1647.8369 0.83690442 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;O75369-6;O75369-3;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 2 0 1 44.614 44.697 3 1.1331E-06 12021 20230619_1881_Aki_TMTPro18x_K_F2 122.46 101.8 78637 58634 77835 82080 71918 84798 92573 86310 97659 103590 106760 93823 116770 97642 99014 129450 132950 121960 72667 53887 79089 80989 75754 85545 92300 88545 99594 103470 109450 95928 118040 102290 103030 129060 126800 115950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129670000 12367 3299 11696 23714 19051 19051 1 9606 Homo sapiens 0.0388994466652548 HVGWEGAK Unmodified 882.4348 0.43480077 771 A0A0A8K9B7;B2R728;A0A024RDQ9;P30825 SLC7A1 High affinity cationic amino acid transporter 1 yes no 0 0 0 6.5 0.5 1 1 38.312 38.386 3 0.00052209 8872 20230619_1886_Aki_TMTPro18x_K_F6 124.98 60.147 93179 68163 85873 90339 91810 91545 89891 94094 93373 98793 113500 118910 111740 93137 101160 109560 141910 113030 86047 62612 87935 89426 94775 92556 90913 96085 95755 100160 115460 118910 113620 97787 105330 110010 135180 107420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 70969000 12368 771 11697 23715;23716 19052;19053 19052 2 9606 Homo sapiens -0.011119241052824691 HVIDFFK Unmodified 904.48069 0.48068833 4096 Q69YJ7;Q9NTZ6;B4DRP9;B3KQH4 DKFZp667H197;RBM12 RNA-binding protein 12 yes no 0 0 0 2 0 1 52.98 53.013 3 0.0024206 15753 20230619_1881_Aki_TMTPro18x_K_F2 120.49 87.226 109570 92762 97929 114640 99790 111210 110530 108660 117620 129850 121810 114150 129890 114340 116090 144930 128120 143300 101240 85098 100580 113920 103820 112670 111060 111770 119690 129610 125080 116660 131690 119560 119120 144970 122570 136070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100440000 12369 4096 11698 23717 19054 19054 1 9606 Homo sapiens 0.024627210769494923 HVIECAK Unmodified 855.42727 0.42727255 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;P43246-2;B4DN49;B4DL39;B4DSB9;A0A2R8Y713 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 5.5 0.5 1 1 34.268 34.335 3 0.0019498 7383 20230619_1886_Aki_TMTPro18x_K_F6 129.4 83.679 111960 64924 146230 129120 150470 155850 131370 149040 130540 109940 161120 168170 150170 134530 151120 79571 178480 149250 103600 60024 145620 125410 155250 155310 133710 151660 134140 114960 163470 166820 153700 137010 154730 85011 170300 141130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 172390000 12370 3585 11699 23718;23719 19055;19056 19056 2 9606 Homo sapiens -0.006223996972153145 HVIGDYK Unmodified 830.42865 0.42865276 4381 Q96MG7 NDNL2 Melanoma-associated antigen G1 yes yes 0 0 0 6.5 0.5 1 1 38.352 38.426 3 0.05356 8620 20230619_1887_Aki_TMTPro18x_K_F7 54.611 31.055 35422 21410 28973 31994 35911 41683 35898 38953 49420 39218 41381 49733 51374 40654 39044 50599 50882 55377 32651 19711 30094 31552 36809 41330 36609 39977 49244 39960 43314 49691 51525 42774 40637 50918 48600 52530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25730000 12371 4381 11700 23720;23721 19057 19057 1 9606 Homo sapiens 0.006655576631828808 HVISYSLSPFEQR Unmodified 1561.7889 0.7888916 2688 B7Z4A1;O14949 UQCRQ Cytochrome b-c1 complex subunit 8 yes no 0 0 0 1.5 0.5 1 1 50.306 50.332 3 0.021838 14567 20230619_1881_Aki_TMTPro18x_K_F2 43.813 37.811 127140 99511 118110 113450 113710 115020 127770 130380 144480 99843 114290 97147 117420 100270 123210 134740 127700 114860 117460 91245 120620 113530 118780 116590 128550 131320 144880 102530 118740 99041 120050 105130 125500 133700 122050 109360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185870000 12372 2688 11701 23722;23723 19058 19058 1 9606 Homo sapiens 0.030468707464933686 HVKDEQIEHWK Unmodified 1447.7208 0.72081203 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5QJJ5;A0A8I5KRX9;A0A8I5KT29;A0A8I5KV76;A0A8I5KRF4;A0A8I5KSH0;A0A8I5KVZ4;A0A8I5KQU6;A0A8I5KRC9;A0A8I5KTR5;A0A8I5KPV0 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 1 5.5 0.5 1 1 39.546 39.635 5 9.753E-05 9379 20230619_1886_Aki_TMTPro18x_K_F6 132.59 110.96 90358 65488 91160 88854 79442 86738 79744 62775 104380 111770 128970 103350 110800 86687 105560 76832 80520 62439 83498 60173 92327 87763 83487 87337 81178 67179 105920 110110 130170 104710 113280 89465 105890 76699 77158 59523 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120680000 12373 1785 11702 23724;23725 19059 19059 1 9606 Homo sapiens 0.014860458865086912 HVLALTGCGPGR Unmodified 1236.6397 0.63972494 4435 Q9BTY7;E9PIX0 HGH1 Protein HGH1 homolog yes no 0 0 0 3 0 1 39.319 39.374 3 3.4683E-05 9343 20230619_1882_Aki_TMTPro18x_K_F3 95.477 81.806 31001 16018 28569 29015 33585 37881 36262 37222 28544 36423 41952 48591 46873 39462 38100 28548 46085 41591 28581 14798 29306 28333 34546 37590 36185 38043 30084 37193 42672 48409 47257 40443 39278 29636 43985 39382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34569000 12374 4435 11703 23726 19060 19060 1 9606 Homo sapiens 0.03087066642751779 HVLDALDPNAYEAFK Unmodified 1701.8362 0.83623572 3615 P49916-3;P49916;B7Z6I3;P49916-4;P49916-2;K7ERZ5;K7EQB6 LIG3 DNA ligase 3;DNA ligase yes no 0 0 0 6 0 1 60.727 60.785 3 8.1055E-11 18462 20230619_1886_Aki_TMTPro18x_K_F6 127.71 115.55 53411 41186 46884 53415 46846 56439 59350 52856 62425 58394 53597 60428 64352 45188 58201 62147 60366 62167 49320 37815 48221 52966 49043 56744 59188 54421 63082 58781 55933 60711 64983 48057 59431 62168 57749 59040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44804000 12375 3615 11704 23727 19061 19061 1 9606 Homo sapiens 0.013391052268389103 HVLFGTVGVPEHTYR Unmodified 1710.8842 0.88418897 2185 Q59GA0;E9PIM6;B0YJA4;E9PNQ8;P04216;J3QRJ3 THY1 Thy-1 membrane glycoprotein yes no 0 0 0 1.67 0.471 1 2 44.245 44.3 3;4 4.8673E-19 11773 20230619_1881_Aki_TMTPro18x_K_F2 212.17 185.54 250480 173170 213110 211000 241540 227940 243880 258160 287730 272630 283880 302360 301690 257710 284510 303140 325400 321440 231100 158970 219950 210300 248540 230010 247170 261960 290520 275630 292360 304050 306570 269710 291960 304880 310920 305120 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1754899999.9999998 12376 2185 11705 23728;23729;23730 19062;19063;19064 19063 3 9606 Homo sapiens 0.05718223937583389 HVLGILDR Unmodified 921.5396 0.53960019 936 Q5GIA7;A0A7P0T8N5;A0A7P0TBH8;A0A7P0TBI4;A0A7P0Z4N5;A0A7P0T928;A0A7P0TAA2;A0A7P0T9A9;A0A7P0Z4Q5;A0A7P0TAX3;A0A7P0TAD6;A0A7P0T939;Q96KG3;A0A0A0MRF6;Q99996-5;Q99996-3;Q99996;Q99996-1;Q99996-6 AKAP9 A-kinase anchor protein 9 yes no 0 0 0 8 0 1 44.572 44.591 3 0.0024067 11332 20230619_1888_Aki_TMTPro18x_K_F8 104.44 88.234 35306 25561 30903 32476 35712 32891 34189 37789 46895 28642 32116 30490 32639 30515 33521 29450 29824 30949 32589 23470 31829 32243 36655 33354 34953 38014 46408 29527 33662 30884 33356 31410 33844 29716 28579 29376 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6295300 12377 936 11706 23731 19065;19066 19065 2 9606 Homo sapiens 0.07569197371287828 HVLLYGTNPLSR Unmodified 1368.7514 0.75138388 3126 J3KPH8;Q8WUI4-10;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;A0A087WYQ4;H0YH91;Q8WUI4-9;Q8WUI4-2 HDAC7 Histone deacetylase;Histone deacetylase 7 yes no 0 0 0 5 0 1 47.344 47.42 3 0.0011266 12638 20230619_1885_Aki_TMTPro18x_K_F5 87.026 77.812 36395 32087 36188 35361 37680 38639 39856 39584 56840 30457 32015 31891 37602 33897 38090 36513 32830 36698 33668 29399 36792 35506 39086 38861 40567 40133 55873 31376 34266 32401 38241 35030 38426 36670 31489 34840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16389000 12378 3126 11707 23732 19067 19067 1 9606 Homo sapiens 0.08175824271552301 HVLTGSADNSCR Unmodified 1315.5939 0.59389696 1678 Q13347;A0A7I2YQF8;Q5U0F4;Q53HU7;A0A7I2V613;A0A7I2V607;A0A7I2V3N2;A0A7I2V2M3;A0A7I2V640;A0A7I2YQI2;A0A7I2V3U3;A0A7I2V5V8;A0A7I2YQU2;A0A7P0MRT9;A0A7I2V685;A0A7I2YQI6;Q5TFK1;A0A7I2YQC8;A0A7I2YQT9;A0A7I2V4S8;A0A7I2V3K6;A0A7I2YQP9;A0A7I2V391;A0A7I2YQN1;A0A7I2V5E4;A0A7I2V3T4;A0A7I2YQX4;A0A7I2V415 EIF3I Eukaryotic translation initiation factor 3 subunit I yes no 0 0 0 4.5 1.12 1 1 1 1 28.92 28.979 3 8.6771E-10 5100 20230619_1883_Aki_TMTPro18x_K_F4 176.78 159.11 11287 9013.8 14744 10754 13790 12206 12652 11180 14502 12731 16310 16159 15446 11657 12823 13185 16389 14827 10462 8268 14646 10747 14337 12220 12888 11540 14733 12890 16606 16095 15658 12260 13283 13318 15635 14071 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 289110000 12379 1678 11708 23733;23734;23735;23736 19068;19069;19070;19071 19069 4 9606 Homo sapiens -0.0512762333014507 HVLVTLGEK Unmodified 994.58113 0.58113065 2989 F8W1R7;P60660-2;P60660;G3V1V0;B7Z6Z4;J3KND3;G8JLA2;F8VPF3;G3V1Y7;Q6IBG5;F8W180;F8VZU9;H0YI43;F8VXL3 MYL6 Myosin light polypeptide 6 yes no 0 0 0 5.33 3.09 1 1 1 45.285 45.323 3 2.7706E-06 11616 20230619_1888_Aki_TMTPro18x_K_F8 174.02 155.76 900860 728770 909830 865880 955780 1136500 1100000 945020 1111000 1255100 1250900 1147300 1259600 977740 1127600 1273100 1256200 1250000 833010 668410 924150 866860 993360 1124200 1100900 987060 1137500 1248400 1276500 1164100 1278300 1030300 1156800 1272800 1200600 1187500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2070299999.9999998 12380 2989 11709 23737;23738;23739 19072;19073 19073 2 9606 Homo sapiens 0.08362333339948691 HVLYVEHR Unmodified 1051.5563 0.55631289 3072 H3BQ53;Q9BQ70;Q9H7D3;H3BSP8;H3BS87;H3BMJ8;H3BTU3 TCF25 Transcription factor 25 yes no 0 0 0 6 0 1 29.946 29.977 3 0.025231 5777 20230619_1886_Aki_TMTPro18x_K_F6 60.074 45.937 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12381 3072 11710 23740 19074 19074 1 9606 Homo sapiens 0.03259698257238597 HVMQPYYK Oxidation (M) 1080.5063 0.50625115 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 4.5 3.5 1 1 36.548 36.541 3 0.0040288 8577 20230619_1880_Aki_TMTPro18x_K_F1 90.308 63.852 151450 123430 128800 142610 189990 176210 170290 181110 200920 93660 110160 90415 87606 80041 130260 100410 114330 71614 139870 113170 133690 142920 191800 175830 173710 182290 198990 99415 116260 91763 92232 83909 130640 99083 109250 68481 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 128220000 12382 3758 11711 23741;23742 19075;19076 19075 2438 2 9606 Homo sapiens -0.030781724629378004 HVMQPYYK Unmodified 1064.5113 0.51133653 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2.5 0.5 1 1 40.197 40.262 3 0.0086742 9895 20230619_1881_Aki_TMTPro18x_K_F2 69.998 39.126 127990 91147 116760 110550 128040 146840 142790 133800 151990 94711 92285 83016 97889 81344 114350 103420 109670 84279 118170 83658 119690 110560 132550 145410 143330 136540 151770 97578 97746 84851 100530 85122 115660 102560 104800 80344 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168530000 12383 3758 11711 23743;23744 19077 19077 1 9606 Homo sapiens -0.018338686003289695 HVNPVQALSEFK Unmodified 1367.7197 0.7197494 1411 P35221-2;P35221;A0A384MDY0;B4E2G8;B4DU00;B4DKT9;P35221-3;B3KSR8;E5RGY7 CTNNA1 Catenin alpha-1 yes no 0 0 0 1 0 1 54.563 54.563 3 0.0016111 16236 20230619_1880_Aki_TMTPro18x_K_F1 90.614 59.724 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12384 1411 11712 23745 19078 19078 1 9606 Homo sapiens 0.05059831517587554 HVNTNPLCDLTPIFK Unmodified 1767.8978 0.89779012 312 A0A024R4X7;Q9UKX7-2;Q9UKX7 hCG_1989366;NUP50 Nuclear pore complex protein Nup50 yes no 0 0 0 2 0 1 60.577 60.588 3 2.0542E-08 18841 20230619_1881_Aki_TMTPro18x_K_F2 142.54 128.63 173170 138380 145810 162070 130280 171710 169730 159880 181540 186990 153360 143330 183370 138230 136090 192730 160330 172240 159890 126910 150300 161860 137890 172580 169190 164890 183280 186210 159890 147360 183850 145740 140880 191470 153250 163760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204860000 12385 312 11713 23746 19079;19080 19079 2 9606 Homo sapiens 0.04455713654442661 HVPCVEDEDFIQALDK Unmodified 1913.8829 0.88292792 4541 Q9HAU5;Q8TE88;B4DHP3 UPF2 Regulator of nonsense transcripts 2 yes no 0 0 0 3.5 0.5 1 1 58.507 58.523 3 1.1347E-05 17723 20230619_1883_Aki_TMTPro18x_K_F4 100.54 93.133 21112 23509 27762 29378 26284 28480 28720 27524 29355 26948 30663 29058 25718 25537 29421 28232 26307 30455 19617 21551 27636 29175 27455 28849 28846 28183 29908 27332 31182 29292 26600 26587 29677 28458 25229 28887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95567000 12386 4541 11714 23747;23748 19081 19081 1 9606 Homo sapiens -0.037458230041920615 HVPGGGNVQIQNK Unmodified 1346.7055 0.70549632 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;A0A024R2V0;P27816-4;Q86Y04;H0Y2V1;F8W9U4;B4DSQ1;Q8NDS5 MAP4;DKFZp547H1810 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 0 1 0 1 37.875 37.875 3 4.5627E-06 9150 20230619_1880_Aki_TMTPro18x_K_F1 127.83 90.687 85361 68123 82356 85149 95233 107470 88649 99250 113980 79939 101760 82179 88580 70098 94733 84914 110420 79912 78896 62515 84117 84885 97793 106780 90578 101400 114060 81954 104280 83024 91104 73506 97019 84854 105280 76066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133370000 12387 2902 11715 23749 19082 19082 1 9606 Homo sapiens 0.046011790893317084 HVPPLTEEQLNR Unmodified 1431.747 0.74702678 352 A0A024R5Q8;Q05D32-2;Q05D32;H0YMB4 CTDSPL2 CTD small phosphatase-like protein 2 yes no 0 0 0 3.5 0.5 1 1 39.997 40.046 3 3.0318E-07 9584 20230619_1883_Aki_TMTPro18x_K_F4 129.82 100.66 46911 34275 46801 48533 55893 55216 55222 58647 58947 46631 56429 49834 50994 40315 46450 45452 54470 46538 43347 31507 47693 47925 57263 55404 55845 59341 59693 47873 57729 50154 51986 42185 47747 45663 51984 44220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99397000 12388 352 11716 23750;23751 19083 19083 1 9606 Homo sapiens 0.04842315057999258 HVQGILR Unmodified 821.48717 0.48717069 2167 P62308;A8MWD9;Q49AN9;F5H013;C9JVQ0 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 yes no 0 0 0 1.5 0.5 1 1 33.316 33.345 2 0.0078257 7000 20230619_1881_Aki_TMTPro18x_K_F2 122.15 56.257 98866 87051 83474 81719 153410 203140 117860 112880 230060 26293 25924 33102 31023 27558 49577 34828 40743 34494 91344 79655 87165 84526 153410 194040 124110 119170 219240 31952 36483 33176 32500 28982 49513 34912 39025 32789 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38416000 12389 2167 11717 23752;23753 19084;19085 19085 2 9606 Homo sapiens 0.06928659028324091 HVQGWPADHAEK Unmodified 1373.6476 0.64764709 942 A0A0A0MRT2;A0A7P0T961;A0A8V8TQV5;Q9BTA9-5;Q9BTA9-2;Q9BTA9 WAC WW domain-containing adapter protein with coiled-coil yes no 0 0 0 4.5 0.5 1 1 36.17 36.238 4 3.2264E-05 8004 20230619_1885_Aki_TMTPro18x_K_F5 122.39 93.587 32975 21163 29599 30129 31455 32085 26091 27280 43013 35687 40109 31935 37212 35395 31678 31925 38305 30671 30424 19466 30367 29706 32407 32189 27153 28425 42723 35538 41090 32723 37837 36200 32673 32078 36533 29173 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71375000 12390 942 11718 23754;23755 19086 19086 1 9606 Homo sapiens -0.024230828360941814 HVQLSHEFESLVR Unmodified 1579.8107 0.81068967 1682 A0A7L4XSC9;A0A7M2JGN3;A0A7L4XVG2;Q53Y41;Q6IBS8;A0A7S6PWV5;B4DPL5;A0A7L4XVT7;A0A7L4XUZ5;A0A7S6PWV2;A0A7L4XT53;A0A3S5X9I4;A0A3Q8A2L5;P20711;P20711-3;A0A7L4XT01;A0A087WV24;A0A3S5WLQ6;A0A0S2Z3N4;A0A3Q7ZZZ2;A0A3S6D699;B4DPG2;A0A087WU57;A0A3S6CPV2;H7BZF7;A0A3S5XFR7;A0A3S6CVQ1;P20711-4 DDC Aromatic-L-amino-acid decarboxylase yes no 0 0 0 6.5 0.5 1 1 46.055 46.142 4 1.3779E-15 11794 20230619_1887_Aki_TMTPro18x_K_F7 206.66 172.78 83480 69742 81958 83830 104400 122230 112470 112020 135540 88676 93654 98998 109330 95817 92824 120100 106790 108600 77190 63965 83760 84011 106960 120420 113580 114490 134970 91293 98779 99999 110360 100190 95602 119580 102050 103270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181800000 12391 1682 11719 23756;23757 19087;19088 19088 2 9606 Homo sapiens 0.043976754950790564 HVQSLEPDPGTPGSER Unmodified 1704.8067 0.80672651 4618 Q9NX46 ADPRHL2 Poly(ADP-ribose) glycohydrolase ARH3 yes yes 0 0 0 2.5 0.5 1 1 36.58 36.636 3 3.9685E-12 8329 20230619_1881_Aki_TMTPro18x_K_F2 168.47 155.68 50900 41629 54773 51658 57619 51953 52789 47729 62902 65341 74823 79640 71220 64013 60837 67018 79258 78821 47096 38196 55320 51361 59405 52460 53840 49556 63998 65525 76066 79628 72341 66697 63095 67947 75653 74741 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97349000 12392 4618 11720 23758;23759 19089;19090 19089 2 9606 Homo sapiens -0.017484587893022763 HVTNPAFTK Unmodified 1013.5294 0.52942943 4016 Q58EY4;Q92922;Q05CR1;Q05BW5;F8WE13 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 0 1.5 0.5 1 1 38.405 38.437 3 0.026426 9119 20230619_1881_Aki_TMTPro18x_K_F2 56.209 36.423 58343 50277 56247 56716 62349 65106 55868 58851 92674 62645 70034 67777 70374 58867 65061 66799 75927 71440 53950 46080 57393 56875 64158 65081 57842 60650 91329 63341 72903 68283 71575 61447 66858 67259 72511 67821 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78833000 12393 4016 11721 23760;23761 19091 19091 1 9606 Homo sapiens 0.02320589646035387 HVVAVVLGDVGR Unmodified 1219.7037 0.70370541 1734 Q9BT22;A0A804HJL6;A0A804HKX7;A0A804HKK4;A0A804HLB7;K7EQK1;K7EPU3;A0A804HHW1 ALG1 Chitobiosyldiphosphodolichol beta-mannosyltransferase yes no 0 0 0 1.5 0.5 1 1 50.262 50.287 3 0.00019865 14500 20230619_1880_Aki_TMTPro18x_K_F1 98.105 73.473 9851.1 6333.8 11658 14794 25185 16190 19327 17170 17093 16471 16061 21787 22297 21561 13976 14093 22289 25468 9110.7 5869.1 11904 14244 24824 16303 19743 17463 17522 16846 16834 21834 22187 21858 14816 14922 21268 24058 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138520000 12394 1734 11722 23762;23763 19092 19092 1 9606 Homo sapiens 0.10264170071354783 HVVFGQVIK Unmodified 1025.6022 0.60220045 2866 Q6FGM6;E5KN59;E5KN55;Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes no 0 0 0 3.5 0.5 1 1 46.755 46.815 3 0.0032466 12711 20230619_1882_Aki_TMTPro18x_K_F3 82.452 64.721 141350 115420 141810 135000 129140 174980 142380 156750 147750 119920 104710 100520 121870 81248 134460 111990 122730 110210 130700 105840 143820 135290 135740 173400 143030 160340 148490 122610 110250 102310 124290 86199 135730 112010 117450 104740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134240000 12395 2866 11723 23764;23765 19093 19093 1 9606 Homo sapiens 0.09042343439477918 HVVFIAQR Unmodified 968.55558 0.55558461 3703 P62081;B5MCP9;A0A2R8Y623 RPS7 40S ribosomal protein S7 yes no 0 0 0 3 0.816 1 1 1 37.935 37.988 3 1.7305E-05 8732 20230619_1882_Aki_TMTPro18x_K_F3 162.07 133.67 197700 163870 156510 150840 224550 298320 222900 210480 346620 40187 34367 43573 41585 35611 77183 35559 56856 38512 182510 149960 163500 155400 228570 288350 228280 216480 332660 50553 50397 43913 44065 36995 76493 36041 54469 36615 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1494399999.9999998 12396 3703 11724 23766;23767;23768 19094;19095;19096 19095 3 9606 Homo sapiens 0.07004903608185487 HVVLGAIENK Unmodified 1078.6135 0.61349341 3575 P41227-2;P41227 NAA10 N-alpha-acetyltransferase 10 yes no 0 0 0 8 0 1 44.874 44.902 3 1.6449E-07 11428 20230619_1888_Aki_TMTPro18x_K_F8 185.81 145.9 91868 59601 71240 87216 77222 97620 86460 89346 113400 98562 97363 98930 105910 92276 86316 118160 108760 102660 84680 54838 74286 85890 80184 97669 87460 92088 113340 99176 101010 100220 106930 96739 89530 117370 103800 97696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227780000 12397 3575 11725 23769 19097 19097 1 9606 Homo sapiens 0.07733120742932442 HVVPNEVVVQR Unmodified 1274.7095 0.70951906 2798 CON__Q3SX14;P06396-3;A0A384MEF1;A0A0A0MT01;B7Z6N2;A0A8V8TND7;B7Z9A0;A0A0A0MS51;B7Z992;B7Z2X4;B7Z4U6;P06396-4;P06396-2;P06396;A0A0U1RQL8;Q5T0I0;Q69YR8 GSN;DKFZp313L0718 Gelsolin yes no 0 0 0 6.5 0.5 1 1 37.265 37.332 3 0.00011796 8465 20230619_1886_Aki_TMTPro18x_K_F6 118.28 97.332 + 21602 18196 22685 26235 31777 37066 34590 34321 46278 32116 42152 43303 35953 29904 41012 36827 39139 40675 19987 16721 23123 25961 32392 36576 35052 35187 46248 32937 43185 43002 37125 31653 41489 37126 37477 38587 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85063000 12398 2798 11726 23770;23771 19098 19098 1 9606 Homo sapiens 0.08315268583032775 HVVQPGYPAHR Unmodified 1259.6523 0.65233854 4281 Q8WVC6;K7ESP4;A0A8I5KT67;A0A8J9G8Q5;Q8WVC6-2 DCAKD Dephospho-CoA kinase domain-containing protein yes no 0 0 0 8 0 1 28.993 29.014 3 0.00028788 5273 20230619_1888_Aki_TMTPro18x_K_F8 103.7 91.487 1981.2 2088.9 3127.3 2125.2 2546.8 1486.7 3543.8 3469.1 3042 1784.4 3295.4 3202.5 3747.7 2527.3 3586.4 1796.5 3296.7 3622.1 1844.1 1911.5 3065.9 2141 2701.7 1601.6 3501 3362.6 3130.1 1935.6 3389.5 3164.9 3797.2 2595.6 3623.5 1925 3159.3 3419.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9081000 12399 4281 11727 23772 19099 19099 1 9606 Homo sapiens 0.03289846097300142 HVVQSISTQQEK Unmodified 1382.7154 0.7153923 2057 Q5QNZ2;Q08ET0;A8K4W2;P24539;Q53GB3 ATP5F1;hCG_39985 ATP synthase F(0) complex subunit B1, mitochondrial yes no 0 0 0 6.5 0.5 1 1 36.822 36.888 3 8.6801E-25 8282 20230619_1886_Aki_TMTPro18x_K_F6 234.63 192.76 62277 49810 58945 55702 72903 73346 78109 75735 83598 71786 83537 81628 75524 60727 61503 77279 85954 80953 57552 45660 60348 56037 74702 72910 78608 77083 84799 73059 85328 81731 76668 64220 64223 77551 81970 76869 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 437420000 12400 2057 11728 23773;23774 19100;19101 19100 2 9606 Homo sapiens 0.039343223040532393 HVYNLPK Unmodified 869.47594 0.4759373 1210 A0A140VJX5;Q96SK2-2;Q96SK2;Q96SK2-3 TMEM209 Transmembrane protein 209 yes no 0 0 0 1.5 0.5 1 1 39.531 39.565 3 0.07034 9625 20230619_1881_Aki_TMTPro18x_K_F2 50.966 20.396 228770 143700 188070 210730 237480 265090 248930 243320 319430 219030 224710 229030 219470 196290 207310 238400 270110 205310 210920 132240 195340 207920 243300 263330 252360 249410 317340 223180 234810 230990 223780 205670 214630 236980 257390 195590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138560000 12401 1210 11729 23775;23776 19102 19102 1 9606 Homo sapiens 0.035978369341819416 HVYTQQEVR Unmodified 1158.5782 0.57817054 1617 A0A6Q8PG61;A0A6Q8PGL0;A8K6K6;A0A6Q8PF62;A0A6Q8PGY7;A0A6Q8PF70;A0A6Q8PHC7;A0A6Q8PHP5;A0A6Q8PG59;A0A6Q8PHA1;A0A6Q8PGP4;A0A6Q8PGB4;A0A6Q8PFJ3;A0A6Q8PHK3;A0A6Q8PGY4;A0A6Q8PF86;A0A6Q8PHM5;A0A6Q8PHB4;Q5TCS5;Q5TCS4;A0A6Q8PGM1;A0A6Q8PHH5;Q92562 FIG4 Polyphosphoinositide phosphatase yes no 0 0 0 4.5 0.5 1 1 28.777 28.851 3 1.5954E-06 5130 20230619_1883_Aki_TMTPro18x_K_F4 159.58 132.26 7112.4 5307.4 9246.5 7516.1 12204 10213 9344.2 8326.1 10441 9956.5 9752.3 9900.2 10111 10851 8001.6 7947.1 13335 7827.2 6589.3 4878.4 9244.5 7444.8 12335 10087 9621.7 8680.6 10555 9979.8 10053 10077 10229 10998 8464.5 8031.3 12669 7455.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6046000 12402 1617 11730 23777;23778 19103 19103 1 9606 Homo sapiens 0.005224582151413415 HWDHLTQVK Unmodified 1162.5883 0.5883413 1410 A0A384MDW7;P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes no 0 0 0 8 0 1 40.392 40.384 3 4.5165E-05 9647 20230619_1888_Aki_TMTPro18x_K_F8 145.89 91.47 90041 63539 87375 88941 116240 119770 124890 140190 121060 97424 122380 120930 108480 95774 118440 93332 120770 114070 83167 58409 89438 88152 118580 119200 125320 140570 123480 101430 124920 120870 111650 99492 120240 95087 115480 108150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52173000 12403 1410 11731 23779 19104 19104 1 9606 Homo sapiens 0.013550659403335885 HWDQNER Unmodified 983.42094 0.42094162 1704 P08195-4;P08195-5;P08195;P08195-3;A0A7P0Z4P5;A0A7P0TAN7;A0A7P0Z4A0;A0A7P0T9F7;F5GZS6;P08195-2;A0A7P0TBF8;B4E2Z3;F5H056;F5GZI0 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 0 1 0 1 28.499 28.499 3 0.0014589 5390 20230619_1880_Aki_TMTPro18x_K_F1 135.84 58.56 18470 11276 20500 18815 21507 19046 17606 22010 27145 21953 29002 32945 24295 23218 34058 18989 36222 37163 17067 10396 20650 18384 22132 19311 18295 22272 27162 22523 29504 32585 25430 24057 34495 20214 34642 35101 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21873000 12404 1704 11732 23780 19105 19105 1 9606 Homo sapiens -0.07143201604390015 HWELTAEGEEIAR Unmodified 1539.7318 0.73177065 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2;K7ER16;K7EK06 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 2 0.816 1 1 1 46.734 46.787 3 1.4903E-15 12936 20230619_1881_Aki_TMTPro18x_K_F2 169.09 142.42 156430 124350 138470 154590 193790 184780 175220 185310 236780 184750 196220 187700 206840 154710 172630 175530 188480 202760 144480 114110 143060 154030 196330 184640 179600 189190 236010 186920 203590 189300 209010 161930 177030 177570 180280 192240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1028399999.9999999 12405 4109 11733 23781;23782;23783 19106;19107 19107 2 9606 Homo sapiens -0.016505965298392766 HWFTMER Unmodified 1005.4491 0.44907062 1011 B4DWM8;A0A0C4DGX8;Q8NF19;B3KR70;A0A384MQW4;Q15904;A6NLC6 ATP6AP1;FLJ00383 V-type proton ATPase subunit S1 yes no 0 0 0 4.5 3.5 1 1 44.354 44.363 3 0.0021321 11229 20230619_1888_Aki_TMTPro18x_K_F8 124.34 95.194 51418 40377 47761 48697 50277 53941 49726 47073 63248 51585 52751 51027 51664 41227 60826 49446 49277 51839 47505 37043 48858 48568 52029 54001 50585 48699 63224 51904 54580 51490 53170 43304 60991 49730 47277 49202 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17073000 12406 1011 11734 23784;23785 19108;19109 19109 2 9606 Homo sapiens -0.05343594948658392 HWFTMER Oxidation (M) 1021.444 0.44398525 1011 B4DWM8;A0A0C4DGX8;Q8NF19;B3KR70;A0A384MQW4;Q15904;A6NLC6 ATP6AP1;FLJ00383 V-type proton ATPase subunit S1 yes no 0 1 0 7 0 1 38.606 38.669 3 0.067422 8716 20230619_1887_Aki_TMTPro18x_K_F7 44.961 31.507 37817 29591 35550 33747 38380 41395 36845 36955 47092 35027 34764 32850 39629 30001 39378 36721 38575 38712 34941 27133 36329 33853 39616 41185 37556 38004 46881 35467 36455 33365 40258 31422 39986 36914 36917 36747 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16639000 12407 1011 11734 23786 19110 19110 574 1 9606 Homo sapiens -0.06587898811267223 HWGGQADFR Unmodified 1072.4839 0.48387622 4129 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 yes yes 0 0 0 6.5 0.5 1 1 37.331 37.398 3 0.043957 8229 20230619_1887_Aki_TMTPro18x_K_F7 42.835 25.399 41197 32514 35007 37557 52101 53609 49056 51804 56252 48410 55865 57648 53166 47799 49368 48907 69156 55512 38038 29816 36349 37732 52673 52960 49853 52931 56861 49395 57228 57759 54207 49681 51349 49508 65883 52705 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50347000 12408 4129 11735 23787;23788 19111 19111 1 9606 Homo sapiens -0.049466358163499535 HWILPQDYDHAQAEAR Unmodified 1948.918 0.91800829 3928 V9HW95;Q15293;Q15293-2;Q5J7V8 HEL-S-84;RCN1 Reticulocalbin-1 yes no 0 0 0 4 0.816 1 1 1 44.531 44.596 4 1.8243E-08 11553 20230619_1883_Aki_TMTPro18x_K_F4 140.27 129.79 86058 59552 61926 86048 93551 103160 95614 106120 127830 92098 106800 119680 102970 87816 106280 121010 133320 110250 79314 54769 65547 84888 94839 103050 97239 107800 127440 94706 110500 119190 105420 93341 109580 120430 127140 104910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 304820000 12409 3928 11736 23789;23790;23791 19112;19113 19112 2 9606 Homo sapiens -0.018493993613446946 HWPFMVVNDAGR Oxidation (M) 1443.6718 0.67175335 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;E9PNE6;P11142-2;Q53HF2;E9PN89;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PPY6;E9PN25;E9PK54 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein no no 0 1 0 1.5 0.5 1 1 49.489 49.518 3 6.24E-05 14170 20230619_1880_Aki_TMTPro18x_K_F1 113.61 92.358 24601 19825 23484 24832 23559 26692 22625 21454 29001 29008 29142 28321 32177 24832 25133 38082 30499 32167 22737 18193 23955 24686 24460 26732 23070 22490 29203 28899 30011 28685 32397 26434 26051 37683 29141 30609 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120500000 12410 3430;2926 11737 23792;23793 19114 19114 1741 1 9606 Homo sapiens -0.032335656740997365 HWPFMVVNDAGR Unmodified 1427.6768 0.67683873 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;E9PNE6;P11142-2;Q53HF2;E9PN89;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PPY6;E9PN25;E9PK54 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein no no 0 0 0 2.5 0.5 1 1 53.387 53.427 3 0.0001923 15864 20230619_1881_Aki_TMTPro18x_K_F2 83.617 66.592 30310 18970 27759 27797 27558 26763 32399 29564 36581 27975 32151 31046 30724 26352 32134 34827 27244 28021 27966 17457 28405 27333 28749 27206 32509 29980 36817 28464 33133 31241 31466 27769 32398 34477 26119 26684 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129980000 12411 3430;2926 11737 23794;23795 19115 19115 1 9606 Homo sapiens -0.01989261811468168 HWPFMVVNDAGRPK Oxidation (M) 1668.8195 0.81948022 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;E9PNE6;P11142-2;Q53HF2;E9PN89;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PPY6;E9PN25;E9PK54 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein no no 0 1 1 4 0.816 1 1 1 47.403 47.469 4 0.00010599 12861 20230619_1882_Aki_TMTPro18x_K_F3 112.15 99.528 406650 349480 403340 419400 388470 415800 405510 405150 458780 487720 461510 436010 512970 420490 410600 554850 502790 467270 376110 320490 409820 417840 405080 420620 409690 416880 464820 486900 475370 444670 517010 441360 425200 550110 479930 444870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2126099999.9999998 12412 3430;2926 11738 23796;23797;23798 19116;19117;19118 19116 1741 3 9606 Homo sapiens 0.011823258598951725 HWPFMVVNDAGRPK Unmodified 1652.8246 0.8245656 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;E9PNE6;P11142-2;Q53HF2;E9PN89;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PPY6;E9PN25;E9PK54 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein no no 0 0 1 4.8 0.748 2 2 1 69.708 69.75 4 8.3893E-09 13763 20230619_1885_Aki_TMTPro18x_K_F5 164.64 139.17 465750 402280 453790 465970 365230 492680 457110 481050 567570 565140 478960 465660 584070 467990 484870 614020 547830 538060 430720 368780 460810 465840 389740 495770 459140 494370 568750 563710 500030 477460 587960 490530 498980 610060 523490 511890 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 5142800000 12413 3430;2926 11738 23799;23800;23801;23802;23803 19119;19120;19121;19122;19123;19124 19123 6 9606 Homo sapiens 0.024266297225040034 HWQIPLGR Unmodified 1005.5508 0.55083358 1682 A0A7L4XSC9;A0A7M2JGN3;A0A7L4XVG2;Q53Y41;Q6IBS8;A0A7S6PWV5;B4DPL5;A0A7L4XVT7;A0A7L4XUZ5;A0A7S6PWV2;A0A7L4XT53;A0A3S5X9I4;A0A3Q8A2L5;P20711;P20711-3;A0A087WV24;A0A3S5WLQ6;A0A0S2Z3N4;A0A3Q7ZZZ2;A0A3Q7ZYN3;A0A3S6D699;B4DPG2;A0A3S6CJ90;A0A3S6CVP2;A0A087WU57;A0A3S6CPU7;A0A3S6CPV2;A0A3S6CS67;H7BZF7;A0A3S5XFR7;A0A3S6CVQ1;A0A3Q8A2M4;A0A3S6D691;A0A3S5WLQ3;A0A3S5X9H4;A0A3Q7ZZY9;A0A3Q8A2K4;P20711-4;A0A3S6CLE2;A0A3S6CN52 DDC Aromatic-L-amino-acid decarboxylase yes no 0 0 0 4 0 1 45.722 45.766 3 0.00072146 12063 20230619_1883_Aki_TMTPro18x_K_F4 112.17 98.177 45379 37867 39852 44080 73841 92701 74500 82241 92884 68746 57277 56269 72576 60663 66587 72301 54391 54762 41923 34720 41518 44634 74152 89757 75581 84271 92147 69885 61114 57867 73293 63036 67175 71485 52161 52197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79198000 12414 1682 11739 23804 19125 19125 1 9606 Homo sapiens 0.04828019465412581 HYAGNVR Unmodified 815.40383 0.40383499 4800 yes no 0 0 0 6 2.92 1 1 2 37.169 37.178 2 0.0095037 8842 20230619_1880_Aki_TMTPro18x_K_F1 119.23 54.671 + 707730 475850 493910 545500 627550 630570 659850 729520 1012300 591090 565400 573370 704370 627570 438420 823740 1076200 678270 652060 436630 521780 546550 642880 633620 673890 734350 992320 605170 606820 585420 703120 655610 487610 815330 1020800 647230 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 618110000 12415 4800 11740 23805;23806;23807;23808 19126;19127 19126 2 9606 Homo sapiens -0.011250774195218582 HYAHTDCPGHADYVK Unmodified 1769.758 0.75800217 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 5.2 1.17 2 1 1 1 31.916 31.983 3;5 2.3773E-10 6375 20230619_1885_Aki_TMTPro18x_K_F5 149.69 138.75 182470 143850 176750 196490 197810 198150 181620 169680 258400 277360 305850 251660 287200 281640 200070 323330 274240 230570 168640 132140 180410 194050 203370 199660 186480 178250 260870 273890 310200 257910 289850 291430 209760 318760 261370 220140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 904830000 12416 1417 11741 23809;23810;23811;23812;23813 19128;19129 19129 2 9606 Homo sapiens -0.09608650630048032 HYAMQEAK Oxidation (M) 992.43857 0.43856552 3884 Q14257;Q14257-2;H0YL43 RCN2 Reticulocalbin-2 yes no 0 1 0 5.5 1.12 1 1 1 1 30.074 30.144 3 0.0005869 5747 20230619_1885_Aki_TMTPro18x_K_F5 122.52 98.486 62711 36187 58455 66261 100410 95357 85010 88325 103920 34555 51278 36641 37174 33657 73358 24752 54771 30118 57847 33414 60402 64762 100470 94022 87125 89252 102450 37997 54444 37082 40132 34345 72650 25485 52414 28639 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87731000 12417 3884 11742 23814;23815;23816;23817 19130;19131 19131 2567 2 9606 Homo sapiens -0.057956223937253526 HYAMQEAK Unmodified 976.44365 0.44365089 3884 Q14257;Q14257-2;H0YL43 RCN2 Reticulocalbin-2 yes no 0 0 0 5.5 0.5 1 1 34.734 34.803 3 0.0006118 7466 20230619_1885_Aki_TMTPro18x_K_F5 122.13 83.113 46262 28494 44220 41501 53866 65933 48400 49536 65059 29569 35875 26513 30784 30310 44934 24701 37915 23941 42695 26222 45224 41142 55129 64397 49617 51186 64050 30955 37923 27226 32288 30828 44936 24947 36248 22798 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69365000 12418 3884 11742 23818;23819 19132 19132 1 9606 Homo sapiens -0.045513185311165216 HYASEEIK Unmodified 975.46616 0.46616048 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 3 0 1 35.932 35.989 3 8.8511E-06 7982 20230619_1882_Aki_TMTPro18x_K_F3 175.44 102.9 73963 45035 69939 72184 90162 115340 90927 92914 141820 114420 133940 150840 142500 134050 96518 106440 185400 196920 68251 41496 71728 71175 92305 112750 93172 97007 141180 115700 138190 150760 143160 137440 103900 112440 176610 186040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217990000 12419 2337;3778;3779 11743 23820 19133 19133 1 9606 Homo sapiens -0.022553958618459546 HYDDFFER Unmodified 1127.4672 0.46722311 2814 D3DS96;Q9NRL2-2;Q9NRL2;Q05CW0;Q32ND1 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 0 0 0 2.5 0.5 1 1 45.259 45.338 3 0.025351 12297 20230619_1881_Aki_TMTPro18x_K_F2 65.404 49.201 68677 63616 75262 71841 68807 76501 78589 73149 97237 88920 86685 85120 86005 78023 91346 83378 86934 82199 63607 58291 75790 71972 72253 76951 79250 75398 97574 88937 89415 86318 88082 80983 92503 83677 83188 78103 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118070000 12420 2814 11744 23821;23822 19134 19134 1 9606 Homo sapiens -0.09141181492964279 HYDLNQLLEPR Unmodified 1396.7099 0.709913 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-6;A0A8V8TPW9;A0A8V8TPX4;A0A8V8TRC7;H7C3P6;A0A8V8TQG1;H0YDF4 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 6 0 1 51.655 51.731 3 1.9581E-12 14673 20230619_1886_Aki_TMTPro18x_K_F6 179.94 144.49 28399 25130 27220 27628 29721 34691 32179 29888 41547 30019 28800 22215 34761 28312 31350 35895 29625 32561 26265 23025 27794 27796 30771 34436 32576 30867 41263 30137 30366 23159 35121 29417 31870 35749 28382 30951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228460000 12421 1852 11745 23823 19135 19135 1 9606 Homo sapiens 0.027426435122151815 HYEDFPK Unmodified 934.41848 0.418482 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 0 3.5 0.5 1 1 40.664 40.715 3 0.010571 9840 20230619_1883_Aki_TMTPro18x_K_F4 91.906 50.877 98965 73495 91962 112630 117850 124800 125800 120260 141350 112340 134300 116930 117920 114640 107240 115070 148860 125010 91404 67620 94525 110610 120550 125130 126820 122980 142710 114170 137280 118490 120500 118310 111570 116170 141860 118710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144980000 12422 3337 11746 23824;23825 19136 19136 1 9606 Homo sapiens -0.05135050062040136 HYEDGYPGGSDNYGSLSR Unmodified 1972.8187 0.81874776 1594 O60716;H0YC95;O60716-3;O60716-2;Q68DU0;C9JZR2;A0A669KB05;O60716-5;O60716-11;O60716-10;O60716-9;O60716-17;Q96FS1;O60716-21;O60716-19;O60716-13;O60716-18;O60716-6;O60716-8;O60716-4;O60716-7;A0A669KB62;O60716-20;O60716-22;O60716-23;O60716-16;O60716-24;O60716-12;O60716-15;O60716-14 CTNND1;DKFZp781O2021 Catenin delta-1 yes no 0 0 0 3 0 1 41.05 41.109 3 5.44E-14 10057 20230619_1882_Aki_TMTPro18x_K_F3 160.49 156.25 27248 22897 21676 25327 28434 27633 28220 27237 30580 37100 35964 33548 41247 32826 27474 39063 37416 36234 25157 20983 22602 25413 28978 27779 28537 28113 31278 36850 36843 34200 41262 34226 28792 38964 35695 34449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112050000 12423 1594 11747 23826 19137 19137 1 9606 Homo sapiens -0.1287488683672109 HYEELQAR Unmodified 1044.4989 0.49885759 859 A0A087WYQ1;O15020-2;O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes no 0 0 0 3 0.816 1 1 1 31.815 31.882 3 0.00049066 6440 20230619_1881_Aki_TMTPro18x_K_F2 137.88 114.87 49764 35528 57676 60838 64365 55941 48541 60455 51894 40360 73662 73875 57393 55456 68399 39311 80900 72712 46040 32741 58015 59266 65764 57044 50053 60921 53458 42873 73862 72844 59659 56953 69879 41733 77227 68739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38680000 12424 859 11748 23827;23828;23829 19138 19138 1 9606 Homo sapiens -0.021611887390008633 HYEMLANR Oxidation (M) 1048.476 0.47601365 1375 B4DRA5;B4DJW8;A0A2R8YFH5;Q15437 SEC23B Protein transport protein Sec23B yes no 0 1 0 4.5 0.5 1 1 30.712 30.782 3 0.022136 6013 20230619_1885_Aki_TMTPro18x_K_F5 63.673 49.158 21184 15285 23334 27161 35231 33833 30950 36921 35958 25794 28130 32924 26723 25663 32211 19361 33868 27154 19590 14093 23723 26522 35496 33763 31612 37185 36013 26885 29216 32821 27605 26371 32673 20042 32342 25733 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23174000 12425 1375 11749 23830;23831 19139 19139 862 1 9606 Homo sapiens -0.04628531128150826 HYEVEILDAK Unmodified 1215.6136 0.61355299 1467 B3KM97;A0A384NL45;Q9NZ01;M0R3C3;Q9NZ01-2 TECR Very-long-chain enoyl-CoA reductase yes no 0 0 0 3.5 0.5 1 1 49.399 49.434 3 2.9311E-05 13723 20230619_1883_Aki_TMTPro18x_K_F4 142.83 110.5 346220 308340 387630 402610 333700 457210 487450 453420 471420 510500 615800 668470 584050 541290 646250 554250 618800 757280 320640 282980 389820 399550 355400 457800 482130 465150 486770 517500 624230 666870 600210 563250 654080 568410 593290 716610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 824480000 12426 1467 11750 23832;23833 19140;19141 19141 2 9606 Homo sapiens 0.014370759522762455 HYFIEVNSR Unmodified 1163.5724 0.57235688 332 A0A024R5C5;P11498;A0A494C101;A0A494C0T2;A0A494C016;P11498-2;E9PRE7 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 7.5 0.5 1 1 41.477 41.511 3 2.6999E-05 10100 20230619_1888_Aki_TMTPro18x_K_F8 156.35 109.88 87891 60770 83940 89308 80881 79358 103640 97655 118000 107120 122480 117940 110120 88968 110040 125930 123570 125530 81161 55901 85585 87713 84795 81422 103610 98785 119500 108060 124890 118310 112760 94696 112740 125880 118110 119220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 201270000 12427 332 11751 23834;23835 19142;19143 19143 2 9606 Homo sapiens -0.002886402965259549 HYFQNTQGLIFVVDSNDR Unmodified 2152.0338 0.033766329 258;3472;1931 P84077;A0A024R3Q0;A0A8V8TQC0;A0A8V8TNZ5;P61204;A0A8V8TQP8;A0A024R0Y6;A0A8V8TNZ0;B4DN70;B4DEB9;B4DJC8;F5H423;A0A8V8TP92;F5H0C7;C9J1Z8;A4D0Z3;B4DLJ3;P84085;P18085;C9JAK5;C9JPM4 ARF1;ARF3;ARF5;ARF4 ADP-ribosylation factor 1;ADP-ribosylation factor 3;ADP-ribosylation factor 5;ADP-ribosylation factor 4 no no 0 0 0 8 0 1 57.176 57.228 3 0.00022499 16703 20230619_1888_Aki_TMTPro18x_K_F8 76.768 58.404 29984 26936 35154 36030 32979 42192 44559 44231 58599 33998 34155 32325 42511 34643 42972 41100 37879 41822 27782 24725 35270 35721 34788 42216 44664 44766 57846 34912 36558 33006 43140 36014 43398 41246 36319 39701 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36634000 12428 258;1931;3472 11752 23836 19144 19144 1 9606 Homo sapiens 0.003830796988495422 HYFQNTQGLIFVVDSNDRER Unmodified 2437.1775 0.17747045 258;3472;1931 P84077;A0A024R3Q0;A0A8V8TQC0;A0A8V8TNZ5;P61204;A0A8V8TQP8;A0A024R0Y6;A0A8V8TNZ0;B4DN70;B4DEB9;B4DJC8;F5H423;A0A8V8TP92;F5H0C7;C9J1Z8;A4D0Z3;B4DLJ3;P84085;P18085;C9JAK5;C9JPM4 ARF1;ARF3;ARF5;ARF4 ADP-ribosylation factor 1;ADP-ribosylation factor 3;ADP-ribosylation factor 5;ADP-ribosylation factor 4 no no 0 0 1 7.67 0.471 1 2 52.736 52.81 3;4 9.8867E-67 14764 20230619_1888_Aki_TMTPro18x_K_F8 308.52 281.2 251870 201880 238090 250250 179870 223460 226900 185830 285080 274830 228830 279400 302660 268710 303340 347310 276070 344070 232760 185240 242210 248390 193020 227140 227820 195080 285050 273270 241090 282960 306670 281650 307210 347430 264880 326580 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2643900000 12429 258;1931;3472 11753 23837;23838;23839 19145;19146;19147;19148 19146 4 9606 Homo sapiens 0.016368817391594348 HYFYADLPAGYQITQQR Unmodified 2069.9959 0.99592426 2850 Q63Z41;D6RDU9;D6REA0;O75879 DKFZp686M0146;GATB;PET112 Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial yes no 0 0 0 1.5 0.5 1 1 53.619 53.647 3 1.4601E-13 16050 20230619_1881_Aki_TMTPro18x_K_F2 156.57 137.02 26411 19533 19185 22716 24580 24642 30711 25907 31655 28143 32356 32664 29902 30962 28385 33550 37599 38708 24352 17918 20196 22708 25260 24811 30615 26453 32202 28470 33062 32904 30572 32112 29428 33947 35893 36706 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78190000 12430 2850 11754 23840;23841 19149;19150 19150 2 9606 Homo sapiens 0.003726135040324152 HYGCNIVR Unmodified 1017.4814 0.48143338 2240 B4DXX1;B2R713;Q7Z2T5;Q7Z2T5-2;X6RK96 TRMT1L TRMT1-like protein yes no 0 0 0 8 0 1 31.522 31.532 3 0.0011041 6161 20230619_1888_Aki_TMTPro18x_K_F8 104.21 89.54 34325 24053 35804 39621 51719 51097 44830 48363 54736 25330 35618 32369 33098 26083 37741 27039 42547 34392 31722 22156 36504 38856 52238 50718 45895 48970 54335 27097 37324 32362 34082 27180 38496 27603 40606 32617 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11115000 12431 2240 11755 23842 19151 19151 1 9606 Homo sapiens -0.026608075456579172 HYGDQVDR Unmodified 988.43626 0.43625733 1137 Q9BQ52;Q9BQ52-4;B4DT15;A0A0S2Z5M8;B3KT00;G5E9D5;B3KSU9;Q9BQ52-2;E7ES68;B4E365;Q9BQ52-3 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes no 0 0 0 1 0 1 27.757 27.757 3 0.00049029 5135 20230619_1880_Aki_TMTPro18x_K_F1 137.9 119.17 8160.1 4047.8 9537.5 10537 15741 13390 9700.6 12266 11731 9394.4 13580 15161 12692 12160 11593 7552.7 15159 13069 7537.4 3764.2 9665.7 10130 15666 13295 10204 12526 11905 9825.2 13816 15015 12940 12396 11980 7989.1 14455 12362 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6660300 12432 1137 11756 23843 19152 19152 1 9606 Homo sapiens -0.05842334807186944 HYGEHVCTAK Unmodified 1200.5346 0.53459117 4412 Q9BQG0;Q9BQG0-2;I3L1L3;B4DZZ1 MYBBP1A Myb-binding protein 1A yes no 0 0 0 5.5 0.5 1 1 30.743 30.798 4 0.00075085 6056 20230619_1886_Aki_TMTPro18x_K_F6 86.344 64.016 114670 67677 111600 119980 140550 131610 116210 109060 144900 120640 137850 121450 150720 125280 106870 99386 154940 121510 105830 62455 114060 116910 142910 131680 119470 113330 145680 121440 142150 123380 151350 127800 112030 101590 147550 115300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97603000 12433 4412 11757 23844;23845 19153;19154 19154 2 9606 Homo sapiens -0.057654745536638075 HYGFQLYQSDPSGNYGGWK Unmodified 2202.9759 0.9759171 3505 P25789;H0YMZ1;H0YN18;H0YL69;B2RDG0;H0YMA1;P25789-2;H0YKT8;H0YMI6;H0YKS0;H0YLC2;H0YMV3 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type;Proteasome subunit beta type yes no 0 0 0 2 0 1 56.207 56.226 3 6.1441E-15 17089 20230619_1881_Aki_TMTPro18x_K_F2 162.81 152.76 35347 28863 35012 37867 29112 37256 34496 33787 92433 42386 37966 41721 52431 39220 36149 48920 48194 47458 32681 26498 35527 37487 31018 37627 36203 34998 88558 42493 42129 42292 52282 41079 37778 48884 45990 45094 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42442000 12434 3505 11758 23846 19155 19155 1 9606 Homo sapiens -0.07745182226562974 HYGGLTGLNK Unmodified 1058.5509 0.55089316 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8;B4DKL5;P15259;Q8N0Y7 PGAM1;PGAM2;PGAM4 Phosphoglycerate mutase;Phosphoglycerate mutase 1;Phosphoglycerate mutase 2;Probable phosphoglycerate mutase 4 yes no 0 0 0 2 0.816 1 1 1 42.177 42.239 2;3 5.3379E-11 10855 20230619_1881_Aki_TMTPro18x_K_F2 172.21 128.08 271690 176950 235220 263190 236630 227140 238900 253710 295410 299570 287040 289920 304100 249180 262800 299390 351450 283970 250620 162840 242090 258160 245650 233050 242600 258600 297560 299950 295620 293320 307900 261070 273020 299110 334940 270130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 264160000 12435 3475 11759 23847;23848;23849 19156;19157;19158 19157 3 9606 Homo sapiens 0.023959746747550525 HYGNKPIGMGGTFIIQK Unmodified 1859.9716 0.97162377 230 Q9H0W9;E9PQS1;A0A024R396;A8K718;A0A087WT99;E9PPB5;Q9H0W9-2;A0A1W2PRB8;E9PJU8;Q9H0W9-4 C11orf54 Ester hydrolase C11orf54 yes no 0 0 1 5.5 0.5 1 1 50.651 50.728 4 0.011 14218 20230619_1886_Aki_TMTPro18x_K_F6 68.257 40.608 161600 139570 155240 139550 133500 162190 169270 169940 179010 165110 154280 141430 169590 151980 184180 151890 168660 168170 149430 127780 157830 141380 141460 162500 168930 172900 180830 166440 160120 145030 173340 156460 185990 153670 161520 159560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144080000 12436 230 11760 23850;23851 19159 19159 1 9606 Homo sapiens 0.0760368181679496 HYGPGWVSMANAGK Oxidation (M) 1489.6772 0.67723266 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 1 0 2 0 1 42.683 42.764 3 1.169E-07 11069 20230619_1881_Aki_TMTPro18x_K_F2 142.83 137.83 295520 238730 273530 293840 354020 372130 324850 345750 337630 247140 260610 239270 242870 206680 313150 264100 293810 253050 273070 219030 280990 293230 360450 369760 329650 352290 339970 254940 270290 242380 251810 217300 315840 264030 281020 240610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 391370000 12437 1716 11761 23852 19160 19160 1116 1 9606 Homo sapiens -0.04801886882250983 HYGPGWVSMANAGK Unmodified 1473.6823 0.68231804 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 0 0 4 0.816 1 1 1 47.521 47.587 3 6.8045E-09 13024 20230619_1882_Aki_TMTPro18x_K_F3 159.44 138.58 293320 238810 265880 266420 264400 341790 312650 346700 365860 289810 265490 242480 275550 245860 326560 288780 309700 265660 271010 218900 272440 267910 276560 339890 314120 352100 365540 294630 277560 248580 283460 255740 330010 288370 296180 252730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 780420000 12438 1716 11761 23853;23854;23855 19161 19161 1 9606 Homo sapiens -0.03557583019642152 HYGYNSYSVSNSEK Unmodified 1633.7009 0.70086445 226 P07858;E9PHZ5;A0A024R374;A8K2H4;B4DL49;A0A7P0NGZ6;A0A7I2YQK9;A0A7I2V668;E9PQM1;A0A7I2V440;E9PR21;B4DMY4;B3KUJ8 CTSB Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes no 0 0 0 6.5 0.5 1 1 39.37 39.446 3 3.0068E-07 9014 20230619_1887_Aki_TMTPro18x_K_F7 139.74 127.6 63565 49216 69691 81994 95084 113580 111880 119580 67296 90035 85228 123460 92777 65028 101790 114500 126560 153050 58804 45323 70787 80469 97116 112490 110460 120910 71927 93426 87269 121760 94818 71723 104790 116340 121040 144860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132330000 12439 226 11762 23856;23857 19162;19163 19163 2 9606 Homo sapiens -0.09063794634744227 HYHPEVSK Unmodified 995.48248 0.48247924 4451 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog yes yes 0 0 0 6 0 1 31.092 31.123 4 0.014495 6201 20230619_1886_Aki_TMTPro18x_K_F6 65.88 40.321 45236 6740.6 14343 34682 51889 12720 35858 40668 65507 47396 69775 72972 78699 62481 17403 71094 27931 67152 41378 6485.7 17769 32381 50286 15236 37961 39809 65158 48332 71674 72592 77071 65240 19676 70926 26894 63680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25422000 12440 4451 11763 23858 19164 19164 1 9606 Homo sapiens -0.015442699051050113 HYHPIVQR Unmodified 1048.5566 0.55664724 2129 Q8WTT2;A8K905;B4DXL4 NOC3L Nucleolar complex protein 3 homolog yes no 0 0 0 1 0 1 26.78 26.78 3 0.0072995 4794 20230619_1880_Aki_TMTPro18x_K_F1 79.451 60.671 7298.5 2633.5 5307.3 7927.2 9148.6 5302 7059 9212.6 10775 8824.7 13374 12888 13648 11609 7646.5 15697 8501.2 13680 6709.9 2462.6 5623.8 7526.1 9117 5652.6 7357.6 9128.9 10859 9062.4 13596 12874 13632 12225 7976.2 15570 8161.5 12996 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3255300 12441 2129 11764 23859 19165 19165 1 9606 Homo sapiens 0.03431117977083886 HYIFNPR Unmodified 945.48209 0.48208531 2154 A8KAK1;Q9NYU2-2;Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 3 0 1 37.798 37.852 3 0.00079371 8717 20230619_1882_Aki_TMTPro18x_K_F3 149.94 95.389 98140 87526 97434 114110 109150 116850 118890 109250 139230 120410 129450 138910 133020 119830 137970 128840 139670 145120 90793 80324 99317 113050 112700 117790 119910 112500 140250 121700 133530 139490 135930 124700 140260 130280 133650 137650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 201830000 12442 2154 11765 23860 19166;19167 19167 2 9606 Homo sapiens 0.007163551657072276 HYIQTMQER Oxidation (M) 1220.5608 0.56080592 1383 E9PMR6;A0A2X0SFF5;Q9NZN5-2;Q9NZN5;B4DGW2;B4E2K6 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 0 1 0 4.5 0.5 1 1 28.761 28.834 3 0.0029626 5102 20230619_1883_Aki_TMTPro18x_K_F4 78.556 52.935 5508.5 3871.3 8045.4 6602.3 6699.4 6294.6 8018.7 7814.9 8420.9 6506.4 7057.4 7072.6 9149 6787.4 7807.4 7084.7 8980.5 7927.4 5108.4 3567.6 7932 6441 7083.4 6422 8023.6 7844.8 8496.9 6664.8 7397.6 7146.6 9202 7032.6 8022.2 7164.9 8573.8 7524.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8715600 12443 1383 11766 23861;23862 19168 19168 866 1 9606 Homo sapiens -0.040652053821986556 HYLGHTDCVK Unmodified 1228.5659 0.56589129 4548 Q9HC35;B5MBZ0;Q9HC35-2;B6EXY3;C1PHA1;J7MA22;C1PHA0 EML4;EML4-ALK variant 7;EML4-ALK;EML4-ALK variant 6 Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 0 6.5 0.5 1 1 33.856 33.917 4 8.9765E-10 6863 20230619_1887_Aki_TMTPro18x_K_F7 167.93 140.29 160160 114870 149550 155930 162450 153970 128230 121240 156200 197040 214530 216590 214170 182210 163720 235550 235830 212740 147900 105560 152950 154030 166680 155180 132260 128230 160090 195630 217270 217840 216240 191850 171740 234370 224790 202380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 319400000 12444 4548 11767 23863;23864 19169 19169 1 9606 Homo sapiens -0.03924901519599189 HYLSEELR Unmodified 1045.5193 0.51925868 2077 A8K5Q1;Q7L2J0;A0A8Q3WKJ6;Q7L2J0-2 MEPCE 7SK snRNA methylphosphate capping enzyme yes no 0 0 0 3 0 1 38.197 38.25 3 0.00042062 8849 20230619_1882_Aki_TMTPro18x_K_F3 122.18 86.734 31059 22338 27346 32727 33010 40571 32808 34451 33822 37304 41981 36623 35357 31363 37954 36858 42205 36327 28669 20544 28211 32275 33873 40266 33135 35686 34733 37520 42370 37049 36428 32811 38775 36929 40300 34530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32766000 12445 2077 11768 23865 19170 19170 1 9606 Homo sapiens -0.0016801807919364364 HYNGEAYEDDEHHPR Unmodified 1867.751 0.75100254 3532 P31689;B7Z5C0 DNAJA1 DnaJ homolog subfamily A member 1 yes no 0 0 0 1 0 1 26.98 26.98 5 1.4632E-05 4839 20230619_1880_Aki_TMTPro18x_K_F1 113.25 110.22 8186.2 6343.2 7293.9 9291.9 10254 7404.6 7898 7158.6 13216 10442 13002 11416 9504.1 10934 10781 9336.8 11994 7993.5 7560.2 5831.9 7533.6 9110.9 10336 7635.3 8261.5 7425.8 13142 10417 13185 11528 9892 11194 10998 9342.9 11437 7621.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14105000 12446 3532 11769 23866 19171 19171 1 9606 Homo sapiens -0.14816291976922003 HYPVFENPK Unmodified 1129.5556 0.55564418 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;Q59EC0 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 7.5 0.5 1 1 43.661 43.705 3 0.00014159 10731 20230619_1887_Aki_TMTPro18x_K_F7 133.57 101.57 204160 159710 194550 184470 194120 218620 222450 233950 224330 253650 264990 259760 287020 246810 247780 273390 267010 287040 188660 146460 198380 184820 202440 218840 222810 238370 230210 255390 270890 263030 290360 256440 253850 275010 255430 272410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 371150000 12447 1718;4020 11770 23867;23868 19172;19173 19172 2 9606 Homo sapiens -0.003951411825028117 HYQGTVDK Unmodified 946.45084 0.45084476 1274 P61764-2;P61764;A0A1B0GVQ5;A0A1B0GWF2;A0A1B0GTP9;A0A0D9SG72;A0A2R8Y5D4;B7Z2V7;B7Z1V5;B7Z3F4;Q59GC9;A0A994J7L2;A0A1B0GW76 STXBP1 Syntaxin-binding protein 1 yes no 0 0 0 5 0 1 32.743 32.825 3 0.00038045 6716 20230619_1885_Aki_TMTPro18x_K_F5 134.25 88.089 28253 16953 36791 37952 29040 27846 30879 38325 29480 27955 43053 48124 27495 35474 42282 19327 50564 44844 26146 15702 36543 36447 30760 29138 31045 38161 30609 29391 42914 47462 29344 36124 43059 21190 48259 42344 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22450000 12448 1274 11771 23869 19174 19174 1 9606 Homo sapiens -0.0245226265905103 HYVGHGNAINELK Unmodified 1450.7317 0.73171107 1586 B4DVW7;A0A5F9ZI63;O75530-3;O75530;O75530-2;E9PJK2 EED Polycomb protein EED yes no 0 0 0 8 0 1 37.809 37.794 4 0.029741 8561 20230619_1888_Aki_TMTPro18x_K_F8 58.674 35.795 50079 34692 37771 45600 55367 51222 66107 69380 85109 51828 60009 62234 62304 48739 60344 58013 65786 58137 46168 31871 39711 45238 56381 51793 66562 69128 84501 53670 62870 62266 63410 51221 61679 58170 62838 55245 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19797000 12449 1586 11772 23870 19175 19175 1 9606 Homo sapiens 0.02437448260820929 HYVYGPLPQSFDK Unmodified 1549.7565 0.75652884 3445 P13073;H3BPG0 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes no 0 0 0 1.5 0.5 1 1 51.375 51.398 3 7.9859E-08 14915 20230619_1880_Aki_TMTPro18x_K_F1 150.06 134.43 213260 175980 193650 257410 251190 231530 230200 262060 318240 235800 263680 297060 304780 263420 213340 386360 376880 356860 197060 161750 199530 252780 255640 236820 236050 264920 316850 241700 274990 297900 305680 279210 228520 384060 358880 339340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 370790000 12450 3445 11773 23871;23872 19176;19177 19176 2 9606 Homo sapiens 0.003640833434928936 HYYEVSCHDQGLCR Unmodified 1822.7515 0.75153659 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;A0A087X2G1;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8;A0A7I2V4Q0;A0A7I2YQD0 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 7 0 1 34.891 34.967 3 1.5647E-08 7292 20230619_1887_Aki_TMTPro18x_K_F7 145.71 143.14 4578.3 3112.8 3558.3 4417.6 5428.1 3828.3 3521.7 4171.4 4400.8 4316.7 3981.5 5178 6418 6002.9 4712.8 5780.6 5574.2 5244.1 4221.1 2862.4 3728.5 4344.7 5426.5 3929 3690.9 4241.9 4424.2 4382.4 4218.7 5243.4 6396.4 6149.1 4875.2 5781 5322.7 4987.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5311400 12451 1661 11774 23873 19178 19178 1 9606 Homo sapiens -0.12692911853037003 HYYFLGR Unmodified 954.47119 0.47118627 2488 B4DHJ9;Q15386 UBE3C Ubiquitin-protein ligase E3C yes no 0 0 0 4 0 1 43.19 43.234 3 0.0072483 10940 20230619_1883_Aki_TMTPro18x_K_F4 97.596 70.342 73088 71816 77027 80015 90710 86830 95217 92586 103710 82746 77691 85387 84410 72665 92671 99046 91524 99038 67697 65783 78136 80260 93135 87472 95980 93930 104110 84256 81325 86150 86353 76768 94064 99084 87632 94040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25482000 12452 2488 11775 23874 19179 19179 1 9606 Homo sapiens -0.007870472085755864 HYYTGTQGLIFVVDCADRDR Unmodified 2385.1172 0.11717838 3721 Q6FH17;Q5U025;P62330 ARF6 ADP-ribosylation factor 6 yes no 0 0 1 7 0 1 53.96 54.027 4 2.8735E-29 15349 20230619_1887_Aki_TMTPro18x_K_F7 199.41 173.17 48372 40897 45885 42908 36969 47335 43794 37084 57749 44046 43375 41608 55222 38722 48459 51253 46984 57083 44719 37461 46670 43248 39371 47302 44185 38808 57439 44117 45685 42273 55608 40757 49332 51615 45038 54118 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 267110000 12453 3721 11776 23875 19180 19180 1 9606 Homo sapiens -0.019975519156105292 IAAEIAQAEEQAR Unmodified 1398.7103 0.71030693 156 Q969G3;A0A2U3TZQ7;B4DGM3;A0A2R8Y855;A0A2R8Y4T4;A0A2R8Y7I9;A0A2R8Y7U4;J3QKS7;A0A2R8Y765;A0A024R1S7;Q969G3-5;Q969G3-6;Q969G3-3;Q969G3-2;Q969G3-4;A0A2R8YES3 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 0 0 0 2 0 1 55.708 55.729 2 1.2875E-10 16912 20230619_1881_Aki_TMTPro18x_K_F2 204 167.48 66736 51909 56191 67897 58436 71643 76468 64217 75461 78532 72543 84325 82967 65170 78642 94510 81586 86345 61609 47664 58084 67277 61064 71970 75983 66550 76857 78767 75124 84669 84109 69414 80297 93995 78066 82080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40269000 12454 156 11777 23876 19181 19181 1 9606 Homo sapiens 0.02690018441421671 IAAESSENVDCPENPK Unmodified 1758.773 0.77304312 1030 A0A0F7NGI8;Q32MZ4-3;Q32MZ4-2;Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes no 0 0 0 1.5 0.5 1 1 44.268 44.309 3 5.0401E-08 12030 20230619_1880_Aki_TMTPro18x_K_F1 123.38 114.56 20638 15852 21047 22295 23076 31339 27230 25000 25518 23933 27399 21768 23700 23928 29103 27304 31573 28036 19079 14568 21396 22092 23954 30834 27157 25949 26156 24192 27839 22303 24592 24778 29624 27432 30161 26634 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116890000 12455 1030 11778 23877;23878 19182 19182 1 9606 Homo sapiens -0.07599248343331055 IAAGIFK Unmodified 718.43776 0.43776088 4077 Q5VW32-2;Q5VW32;Q5VW33;F5GXQ0;B7Z953;B7Z1V1 BROX BRO1 domain-containing protein BROX yes no 0 0 0 3.5 0.5 1 1 56.353 56.375 2 0.06091 16940 20230619_1882_Aki_TMTPro18x_K_F3 81.297 2.2641 1366300 1138800 1228800 1268500 1261200 1768800 1572300 1478500 2116100 791970 683010 580680 654800 501170 1120100 772140 757910 539720 1262500 1043700 1261100 1277100 1320000 1742900 1582500 1512100 2063300 833670 767290 597490 691400 534010 1108800 759760 727160 515890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 315190000 12456 4077 11779 23879;23880 19183 19183 1 9606 Homo sapiens 0.06727951019513512 IAAGLPMAGIPFLTTDLTYR Unmodified 2120.134 0.13399765 4489 Q9H061;E9PI90 TMEM126A Transmembrane protein 126A yes no 0 0 0 5.5 0.5 1 1 66.259 66.302 3 1.687E-22 20694 20230619_1885_Aki_TMTPro18x_K_F5 180.93 168.14 8063.8 7623.8 7392.3 11031 9230.4 9356.4 9733.9 10567 11524 11042 11317 11306 12390 9961.8 13441 10132 12225 12364 7458.5 7003.3 7614.5 10830 9452.3 9615.4 9840.7 10725 11632 11141 11673 11416 12655 10336 13563 10315 11710 11719 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96408000 12457 4489 11780 23881;23882 19184 19184 1 9606 Homo sapiens 0.11873600708258891 IAAHLADFTPR Unmodified 1210.6459 0.64585618 3295 O75165 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 0 0 0 1 0 1 49.661 49.661 3 2.4993E-06 14216 20230619_1880_Aki_TMTPro18x_K_F1 150.04 126.67 19763 18473 19297 21971 23319 25823 21860 25483 25661 24610 26820 23794 26385 21241 22967 26013 26392 26060 18287 16935 19717 21952 23870 25813 22255 26019 25975 24892 27419 24123 26773 22255 23621 26058 25216 24753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149000000 12458 3295 11781 23883 19185 19185 1 9606 Homo sapiens 0.04895908145908834 IAAIDSLNQYTR Unmodified 1363.7096 0.70957864 2607 B4DW13;Q6YP21-3;Q6YP21;A0A0A0MRN7;Q6YP21-2 hCG_23341;CCBL2 Kynurenine--oxoglutarate transaminase 3 yes no 0 0 0 1 0 1 56.035 56.035 3 1.8896E-14 16899 20230619_1880_Aki_TMTPro18x_K_F1 178.95 158.08 18877 19282 21786 20986 20120 26313 21814 22329 23632 25824 28296 27227 28328 23970 26556 33014 30937 32693 17504 17656 21864 21131 21100 26108 21968 23176 24166 25952 28807 27485 28829 25311 27313 32991 29570 31049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141200000 12459 2607 11782 23884 19186 19186 1 9606 Homo sapiens 0.042272237923498324 IAALNALAACNYLPQSR Unmodified 1844.9567 0.95670198 2953 F2Z2U4;H0Y4W2;Q9Y4A5-2;Q9Y4A5;Q59FH1;A0A994J575 TRRAP Transformation/transcription domain-associated protein yes no 0 0 0 6 0 1 62.547 62.598 3 0.0037725 19227 20230619_1886_Aki_TMTPro18x_K_F6 69.069 55.056 102390 95866 98792 123110 111690 135280 108380 112590 146130 123590 142750 127530 130780 121350 140750 145760 140500 156290 94737 87949 101000 122190 115070 135320 110650 116900 146510 124520 146010 129180 134400 126650 142980 146650 134540 148280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90431000 12460 2953 11783 23885 19187 19187 1 9606 Homo sapiens 0.06802189948803061 IAALQCMHALTR Unmodified 1383.7115 0.71150967 4399 Q96T76;Q96T76-8;Q96T76-9;Q96T76-5;H0Y746;H0Y7V3 MMS19 MMS19 nucleotide excision repair protein homolog yes no 0 0 0 5.5 0.5 1 1 50.646 50.722 3 2.3902E-06 14234 20230619_1886_Aki_TMTPro18x_K_F6 132.99 102.42 18297 18837 22368 23409 25799 24908 25130 19954 24754 30392 26157 26445 31546 21306 23795 26125 29110 24356 16977 17271 22438 23281 26462 24975 25360 21023 25343 30030 27004 26830 31620 22429 24636 26073 27768 23169 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117020000 12461 4399 11784 23886;23887 19188;19189 19189 2 9606 Homo sapiens 0.035002380049490966 IAATGVVLDLDK Unmodified 1213.6918 0.69180331 3897 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 0 0 0 7 0 1 61.213 61.252 3 0.0046353 18329 20230619_1887_Aki_TMTPro18x_K_F7 71.085 55.545 61958 50074 56902 62665 64278 65517 71167 69116 71242 77555 86226 81377 85652 77421 82733 89647 83757 92127 57248 45951 58369 62292 66318 66134 71367 70591 73192 78029 87717 82344 87315 80623 84279 90014 80186 87446 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141020000 12462 3897 11785 23888 19190 19190 1 9606 Homo sapiens 0.09350508537522728 IAAYLFK Unmodified 824.47963 0.47962569 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;J3KS13;A0A8V8TQK7 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 5 0 1 62.041 62.089 2 0.011653 18882 20230619_1885_Aki_TMTPro18x_K_F5 123.34 67.242 374650 350880 353610 328870 397010 547810 428660 431500 623360 128870 92559 130480 132220 126930 215960 148450 148990 157470 346580 320990 361640 337030 411070 534470 435920 440620 601300 147610 122140 132430 138010 132150 214050 149560 143260 149440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 316520000 12463 826 11786 23889 19191 19191 1 9606 Homo sapiens 0.06036506708039724 IAAYLQSDQFCK Unmodified 1442.6864 0.68640036 3483 Q6FGJ9;P21266;Q59EJ5;B4E2J2 GSTM3 Glutathione S-transferase Mu 3 yes no 0 0 0 1.5 0.5 1 1 59.829 59.835 2 1.1258E-12 18423 20230619_1880_Aki_TMTPro18x_K_F1 230.65 203.87 86684 70437 79892 90009 71409 80145 92153 90190 91210 109290 100810 107620 113520 95742 91979 126780 113050 137260 80099 64649 81663 89166 75402 82023 91706 91976 93460 109320 103570 108930 114440 100830 95275 127370 108130 130170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220080000 12464 3483 11787 23890;23891 19192;19193 19192 2 9606 Homo sapiens -0.01723538316628037 IADDKYNDTFWK Unmodified 1514.7042 0.70415892 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 1 7 0 1 55.422 55.483 4 2.4975E-05 15965 20230619_1887_Aki_TMTPro18x_K_F7 134.99 97.036 74627 59526 82943 69591 81691 76523 93978 89059 55380 84987 83821 44974 40186 32045 118250 26739 29167 20267 69059 54590 83458 69613 85034 77187 92905 89977 59824 84773 82655 47061 45967 33241 113450 26907 28706 19351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52875000 12465 3452 11788 23892 19194 19194 1 9606 Homo sapiens -0.03260499790121685 IADFGLSK Unmodified 849.45962 0.45961853 3951 Q16566;B2R747;Q2TU65;B3KQM3;A0A0S2Z4Z8;O43353-2;O43353 CAMK4;RIPK2 Calcium/calmodulin-dependent protein kinase type IV;Receptor-interacting serine/threonine-protein kinase 2 yes no 0 0 0 8 0 1 56.637 56.694 2 0.020308 16440 20230619_1888_Aki_TMTPro18x_K_F8 88.948 34.54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12466 3951 11789 23893 19195 19195 1 9606 Homo sapiens 0.028867109774409982 IADGYEQAAR Unmodified 1092.52 0.51998696 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 3 0.816 1 1 1 40.097 40.154 2 4.2237E-05 9646 20230619_1882_Aki_TMTPro18x_K_F3 148.94 128.25 635680 476510 524940 611750 685370 669710 644750 648710 768170 801270 808540 844090 886940 711760 707140 818020 937680 885330 586640 437510 545280 607320 697870 672570 656250 668230 777700 802840 831130 850170 894080 744490 735510 823800 894580 840370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2297500000 12467 2633 11790 23894;23895;23896 19196 19196 1 9606 Homo sapiens -0.022572234301378558 IADLGNACWVHK Unmodified 1382.6765 0.67650438 2119;421 A0A994J591;C9J2M4;P78362-2;P78362;A0A024R704;H7C5L6;Q9UPE1;Q59GF4;E7ETV6;A8MPY5;A8MPP7;H7C521;Q9UPE1-4;Q9UPE1-3;Q9UPE1-2;A8K8B2;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3;A0A024RCU9 SRPK2;SRPK3;SRPK1 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal;SRSF protein kinase 3;SRSF protein kinase 1 no no 0 0 0 1 0 1 53.805 53.805 3 1.5641E-07 15911 20230619_1880_Aki_TMTPro18x_K_F1 164.21 128.8 89599 72836 83320 82377 68906 83794 87652 83372 88956 107020 87877 81819 122800 86400 82276 122540 101730 94915 82799 66771 84948 82467 73277 84624 87355 85834 90657 106100 91669 84415 122190 90953 85669 120890 97102 90469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162480000 12468 421;2119 11791 23897 19197 19197 1 9606 Homo sapiens 0.00047318468659796054 IADMGHLK Oxidation (M) 899.45349 0.4534873 3437 Q6FHF5;P12004;Q6FI35 PCNA Proliferating cell nuclear antigen yes no 0 1 0 6 0.816 1 1 1 38.047 38.124 3 0.015486 8772 20230619_1886_Aki_TMTPro18x_K_F6 68.016 45.187 550270 375790 463350 426280 694700 759020 591080 547790 809440 191430 189070 126640 175220 145820 263580 183810 216920 120750 507630 344760 481170 430720 701070 737360 608000 564570 785650 212090 222340 132750 183760 151780 263420 180870 207330 115710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 548260000 12469 3437 11792 23898;23899;23900 19198 19198 2064 1 9606 Homo sapiens -0.0002613052572542074 IADMGHLK Unmodified 883.45857 0.45857268 3437 Q6FHF5;P12004;Q6FI35 PCNA Proliferating cell nuclear antigen yes no 0 0 0 7.5 0.5 1 1 45.403 45.46 3 0.00073581 11479 20230619_1887_Aki_TMTPro18x_K_F7 114.89 67.827 1711900 1210800 1351100 1248900 1750300 2217600 1676000 1620300 2419000 685480 632650 474660 716800 523080 770620 777240 726870 463610 1578800 1109700 1408200 1271200 1789200 2154500 1715200 1671000 2345700 740690 735940 494930 731820 551510 780190 759510 694060 444630 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1100600000 12470 3437 11792 23901;23902 19199;19200;19201 19200 3 9606 Homo sapiens 0.012181733368834102 IADNHTPK Unmodified 894.45593 0.45593014 276 A0A5P8PBC0;A0A024R3Z2;B8ZZN6;P63165;B8ZZ67;P63165-2 SUMO1 Small ubiquitin-related modifier 1 yes no 0 0 0 5 0.816 1 1 1 33.438 33.498 3 0.0019345 6963 20230619_1885_Aki_TMTPro18x_K_F5 96.311 55.879 72620 31845 99535 93019 146810 137080 100860 120920 98469 72422 128320 135120 97328 98329 120150 48275 131490 117160 67161 29714 99498 89369 147230 134820 104400 123300 101510 77698 128990 132990 101490 99980 121990 53427 125600 110600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64098000 12471 276 11793 23903;23904;23905 19202;19203 19203 2 9606 Homo sapiens 0.004480412035718473 IADQFLGAMYTLPR Unmodified 1594.8177 0.81774888 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5QJR3;A0A8I5KRF4;R4GMP9 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 0 3.5 0.5 1 1 64.275 64.283 3 6.7124E-07 20118 20230619_1883_Aki_TMTPro18x_K_F4 132.05 107.86 5507.5 5887.2 4709.5 4947.2 6043.3 5916.7 6292.6 6168.2 7660 6710.6 6443.6 8428.7 8067.1 7807.4 7848.1 7604.1 8912.2 8292.7 5096.3 5379.3 4871.7 5092.7 6176 5922.7 6369.8 6298.3 7678.8 6807.5 6754.9 8449.8 8179.9 8058.5 8040.9 7685.7 8512.5 7871.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33700000 12472 1785 11794 23906;23907 19204;19205 19205 2 9606 Homo sapiens 0.04413272051283457 IAEALSK Unmodified 730.4225 0.42250475 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 7 0 1 49.262 49.346 2 0.02501 13255 20230619_1887_Aki_TMTPro18x_K_F7 104.37 29.927 211290 113940 237260 240180 280330 313270 236500 290420 280070 227800 324510 338830 307760 280750 292370 164660 326770 305060 195160 105480 239500 232910 286620 310430 242600 296450 284370 237000 330220 336710 313990 285430 298720 175680 312170 288340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 324720000 12473 2188 11795 23908 19206 19206 1 9606 Homo sapiens 0.04651039431666959 IAECSSQLAEEEEK Unmodified 1621.7141 0.71413125 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 0 1.5 0.5 1 1 48.513 48.578 2;3 1.4479E-08 13774 20230619_1881_Aki_TMTPro18x_K_F2 147.52 115.45 64547 54607 64715 60143 62878 65205 76318 62652 67211 76583 78184 81606 87720 72016 75260 90301 90910 84976 59698 50040 65674 60388 65741 65529 75880 64596 69477 76786 80149 82296 88625 75570 77691 90112 86789 80789 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135080000 12474 3549 11796 23909;23910 19207;19208 19208 2 9606 Homo sapiens -0.07185724637679414 IAEESNFPFIK Unmodified 1293.6605 0.66050319 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;Q96D47;D3DXJ4 NSF Vesicle-fusing ATPase yes no 0 0 0 6.5 0.5 1 1 61.649 61.696 3 0.00014949 18512 20230619_1887_Aki_TMTPro18x_K_F7 115.57 88.867 172460 146490 160460 170530 138760 171090 175000 173700 201380 191190 179110 191060 204710 184110 177670 230240 196020 224500 159420 134310 163760 170290 147020 173020 175180 177760 202810 192320 186020 193760 206930 192540 182460 230150 187570 213190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 260800000 12475 1435 11797 23911;23912 19209;19210 19210 2 9606 Homo sapiens 0.02541935503404602 IAEFTTNLTEEEEK Unmodified 1652.7781 0.77811172 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5;Q99529 MYH9 Myosin-9 yes no 0 0 0 3 1.41 1 1 1 1 1 59.808 59.827 3 8.6174E-12 18338 20230619_1882_Aki_TMTPro18x_K_F3 179.46 155.17 102400 80113 92410 96952 91096 110030 116090 105200 125040 127240 126410 120770 141380 119010 131300 145140 130060 147180 94585 73500 94739 96710 95486 110150 115850 108410 126970 127230 130260 122890 143320 124230 133700 145510 124570 139710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 825940000 12476 148 11798 23913;23914;23915;23916;23917 19211;19212 19211 2 9606 Homo sapiens -0.022166212090724002 IAEGAQQGDPLSR Unmodified 1340.6684 0.66844211 1456 C9JEV6;H7C3G9;A0A384N6G7;Q9UJ70;Q9UJ70-2;E9PPU6;H7C286 NAGK N-acetyl-D-glucosamine kinase yes no 0 0 0 3 0 1 43.17 43.236 2 1.7273E-06 11036 20230619_1882_Aki_TMTPro18x_K_F3 144.1 114.36 20475 14565 17474 22229 24405 26041 28127 28604 33846 26025 31241 34757 36795 27945 23889 37793 39076 39463 18894 13403 18139 21856 24906 26091 28305 28973 34025 26713 32425 34672 36758 29582 25433 37868 37244 37463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17034000 12477 1456 11799 23918 19213 19213 1 9606 Homo sapiens 0.011734627528994679 IAEIEAEMAR Unmodified 1131.5594 0.55940893 4705 Q9Y295;F8WEE0 DRG1 Developmentally-regulated GTP-binding protein 1 yes no 0 0 0 2.5 0.5 1 1 56.771 56.797 2 0.00080243 17366 20230619_1881_Aki_TMTPro18x_K_F2 117.01 96.685 148930 122840 142310 152400 130630 145360 142180 151150 160720 156670 154770 141720 166870 128630 139750 169560 165800 165400 137660 112710 144990 151410 136960 147670 143340 154160 162490 157580 159490 144190 168570 135360 144180 169410 158380 157150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 153700000 12478 4705 11800 23919;23920 19214;19215 19214 2 9606 Homo sapiens -0.0011083947094903124 IAELEEEQSQGSTTNSDWMK Unmodified 2282.0009 0.0008708006 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 2.6 1.02 1 1 2 1 59.084 59.102 3;4 3.7678E-11 18054 20230619_1882_Aki_TMTPro18x_K_F3 130.11 122.66 36366 29449 36707 35269 26328 43716 35978 35854 40206 46984 41946 47911 48866 41762 48413 48077 48396 59225 33627 27012 37113 35255 28545 43350 35867 37466 40832 46910 43311 48353 49631 43637 49237 48833 46380 56094 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 245120000 12479 630 11801 23921;23922;23923;23924;23925 19216;19217;19218 19217 3 9606 Homo sapiens -0.0888495999679435 IAELEEEQSQGSTTNSDWMK Oxidation (M) 2297.9958 0.99578542 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 1 0 2 0 1 55.134 55.155 3 1.9686E-22 16654 20230619_1881_Aki_TMTPro18x_K_F2 174 165.84 49540 42103 49882 51411 48128 49959 44489 48481 47633 55809 65698 66205 59971 53672 65904 60248 61424 71481 45822 38619 50611 51144 50007 50613 45223 49833 49094 56300 66326 66309 61670 56125 66637 61087 58883 67737 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83560000 12480 630 11801 23926 19219 19219 367 1 9606 Homo sapiens -0.10129263859380444 IAELMPGASGAEVK Oxidation (M) 1387.7017 0.70171607 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8 PSMC5 26S protease regulatory subunit 8 yes no 0 1 0 5 0 1 51.092 51.167 3 0.0043709 14208 20230619_1885_Aki_TMTPro18x_K_F5 69.258 55 54249 41971 49814 49559 51183 57127 57771 59178 62174 58029 60701 59872 66764 54692 55781 64215 64120 64171 50112 38499 50994 49545 53245 57241 58013 60271 63030 58765 62603 60540 67416 57102 57421 64354 61270 60950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137310000 12481 1202 11802 23927 19220 19220 738 1 9606 Homo sapiens 0.023373284805757066 IAELMPGASGAEVK Unmodified 1371.7068 0.70680145 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 6.5 0.5 1 1 57.985 58.045 2;3 9.3996E-05 17310 20230619_1886_Aki_TMTPro18x_K_F6 132.32 120.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12482 1202 11802 23928;23929 19221;19222 19221 2 9606 Homo sapiens 0.035816323431845376 IAEMEYSGANSIFLR Oxidation (M) 1715.8189 0.8188711 3871 Q13895 BYSL Bystin yes yes 0 1 0 6.5 0.5 1 1 57.64 57.7 3 1.0289E-05 17188 20230619_1886_Aki_TMTPro18x_K_F6 110.55 103.18 31499 30272 34200 35387 38168 41239 46708 39904 44534 40084 34861 35328 34762 31872 48313 39049 35828 34523 29178 27743 34593 35401 39525 41233 46503 40875 45108 40364 36262 35959 36134 33358 48149 38907 34392 32843 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20445000 12483 3871 11803 23930;23931 19223 19223 2540 1 9606 Homo sapiens -0.01040558370459621 IAEPSVCGR Unmodified 987.48076 0.48076468 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;A0A3B3ITP6;A0A8V8TKP2 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 5 0.816 1 1 1 39.615 39.688 2 4.4069E-05 9380 20230619_1883_Aki_TMTPro18x_K_F4 164.72 145.02 318540 216740 253240 270750 285230 296100 278030 283270 360740 348810 394190 344830 398830 329860 303430 385890 427190 346070 293730 199030 263210 269330 293710 297270 283370 292000 364130 348980 402560 349970 402390 343710 317480 384450 406970 329410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 594140000 12484 471 11804 23932;23933;23934 19224;19225 19224 2 9606 Homo sapiens -0.013476469853458184 IAEQVASFQEEK Unmodified 1377.6776 0.67760981 1411 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;P35221-3 CTNNA1 Catenin alpha-1 yes no 0 0 0 3.5 0.5 1 1 54.843 54.872 3 2.1908E-06 16314 20230619_1882_Aki_TMTPro18x_K_F3 122.39 100.34 190180 151860 160350 160090 183850 204440 190670 182890 210860 159980 137870 136120 186010 138540 154120 186220 169400 157890 175600 139130 165730 161650 189390 202920 192410 187700 210740 162310 147000 139460 186710 145430 158290 184690 161850 150310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 225530000 12485 1411 11805 23935;23936 19226;19227 19226 2 9606 Homo sapiens 0.0038781131856922 IAESIPYLK Unmodified 1032.5855 0.58554733 3822 Q12797;Q12797-10 ASPH Aspartyl/asparaginyl beta-hydroxylase yes no 0 0 0 4.5 3.5 1 1 59.122 59.164 3 0.00087848 18161 20230619_1880_Aki_TMTPro18x_K_F1 90.657 61.309 40213 42259 40725 46806 44870 53026 52991 48228 58991 53916 61424 60528 66748 51677 60194 59880 70380 70858 37254 38700 41439 46981 46521 53044 53128 49772 59834 54400 63135 60856 67615 54073 61882 60656 67244 67183 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15071000 12486 3822 11806 23937;23938 19228;19229 19228 2 9606 Homo sapiens 0.07055797762836846 IAETDFEK Unmodified 951.45493 0.45492709 1609;2515 B4DKK3;Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2;K7EIH8;K7ER44;K7EK03;K7EPP7;K7ESP1;K7EJV7;K7EN19;K7EJL5 DNAJC7 DnaJ homolog subfamily C member 7 no no 0 0 0 2.5 0.5 1 1 49.682 49.749 2 0.016166 14344 20230619_1881_Aki_TMTPro18x_K_F2 92.439 38.031 215810 160970 204240 221990 159590 194110 201250 185860 246600 191290 181110 147700 180980 149120 157420 220570 171970 164070 199350 147910 207880 218760 170650 198140 201900 190720 245880 191860 188650 152200 183610 157530 161650 217150 164350 156470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254360000 12487 2515;1609 11807 23939;23940 19230 19230 1 9606 Homo sapiens -0.022742179559941178 IAEVDASVVR Unmodified 1057.5768 0.57677356 3533 P31930;B4DUL5 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 3.5 0.5 1 1 47.503 47.564 2 8.4835E-08 12864 20230619_1883_Aki_TMTPro18x_K_F4 193.1 138.9 935850 874930 895250 942470 1187400 1275100 1220600 1181300 1410800 832330 898330 875410 953730 739880 992630 885230 900630 832780 865820 801330 917620 950910 1211100 1262200 1233900 1203800 1404300 862280 948400 882660 973100 775580 1003000 884770 862140 791780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 546940000 12488 3533 11808 23941;23942 19231;19232 19232 2 9606 Homo sapiens 0.05028824126384279 IAEVDCTAER Unmodified 1162.5288 0.52883709 4089 Q86UY0;Q6EHZ3;Q658S9;Q8NBS9;A0A024QZV0;Q8NBS9-2 TXNDC5;STRF8;DKFZp666I134;hCG_1811539 Thioredoxin domain-containing protein 5 yes no 0 0 0 1.5 0.5 1 1 40.431 40.468 2 2.0827E-19 10000 20230619_1881_Aki_TMTPro18x_K_F2 258.47 218.14 384010 269180 329210 343690 410200 402520 422660 426830 512720 443750 517040 525660 500960 445000 460310 472280 627030 552460 354350 247210 340250 341790 419850 403220 428170 434750 517130 450130 529600 527140 510170 463120 478000 478650 597810 524150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 639780000 12489 4089 11809 23943;23944 19233;19234 19234 2 9606 Homo sapiens -0.0459261785599665 IAEVGGVPYLLPLVNQK Unmodified 1809.04 0.040020906 230 Q9H0W9;E9PQS1;A0A024R396;A8K718;A0A087WT99;E9PPB5;Q9H0W9-2;E9PLC5;E9PLB3;E9PIP1;E9PSC3;A0A1W2PRB8;A0A024R3B0;Q9H0W9-3;E9PR95 C11orf54 Ester hydrolase C11orf54 yes no 0 0 0 3.5 0.5 1 1 64.331 64.352 3 1.2159E-13 20261 20230619_1882_Aki_TMTPro18x_K_F3 158.81 145.86 95015 78687 77124 97886 71560 79183 85531 91000 85911 94730 103280 108300 115730 97769 103080 126110 121450 137920 87728 72196 79870 97024 75176 81769 85492 92282 88233 95908 105730 109020 117120 102720 106190 126850 116140 130810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 124640000 12490 230 11810 23945;23946 19235;19236 19235 2 9606 Homo sapiens 0.16786249668302844 IAFAITAIK Unmodified 946.58515 0.5851534 3710 P62269;A0A0G2JQH2;Q5GGW2 RPS18 40S ribosomal protein S18 yes no 0 0 0 4.5 0.5 1 1 62.348 62.374 2 2.8591E-05 18967 20230619_1885_Aki_TMTPro18x_K_F5 167.24 115.25 1728300 1460900 1474000 1582300 1393000 1832600 1650600 1425600 654740 1331100 1186900 937900 1175500 943140 1373600 1408600 1369400 1192100 1596500 1338600 1518300 1591400 1460700 1824600 1619400 1482800 747750 1336900 1191900 971670 1208900 997700 1393200 1395800 1309100 1135200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3803699999.9999995 12491 3710 11811 23947;23948 19237;19238 19238 2 9606 Homo sapiens 0.10972422833651763 IAFSCPQK Unmodified 949.46914 0.46913736 2121 B4DX01;A8K8F0;Q9HC38-2;Q9Y3E8;Q9HC38;I3L3Q4;B3KV49;B7Z403 GLOD4 Glyoxalase domain-containing protein 4 yes no 0 0 0 3 0 1 48.308 48.387 3 0.02953 13397 20230619_1882_Aki_TMTPro18x_K_F3 63.306 36.922 287970 204790 252610 250680 295320 323150 291930 310450 377080 234850 234810 254330 283290 225650 254480 294910 258800 237200 265790 187980 260170 250390 303490 320950 297110 315910 373320 242260 249870 256470 286190 237320 259730 291930 247430 225980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 245260000 12492 2121 11812 23949 19239 19239 1 9606 Homo sapiens -0.007618440086844203 IAFSSTSLLK Unmodified 1065.607 0.60701105 4713 Q9Y305-3;Q9Y305-2;Q9Y305;Q9Y305-4;H7C5Q2 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial yes no 0 0 0 4 0 1 59.72 59.722 2 7.752E-07 18230 20230619_1883_Aki_TMTPro18x_K_F4 182.98 136.97 71896 66249 67844 80179 92908 116010 104450 100760 109360 64246 65947 60222 63015 58619 82454 70209 72231 64719 66502 60744 69749 80271 94928 114180 104710 102990 109260 66859 69599 61337 65380 61108 82868 70108 69157 61557 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40922000 12493 4713 11813 23950 19240 19240 1 9606 Homo sapiens 0.07683182791583931 IAFTEWIEPPKR Unmodified 1485.798 0.79799972 2629 B7ZAX9;B4DZC0;O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 1 2 0 1 60.333 60.345 3 0.010219 18633 20230619_1881_Aki_TMTPro18x_K_F2 67.997 47.412 52309 47424 51086 51926 46699 56462 54833 54334 64538 61811 49371 51275 64312 56807 53417 63730 60724 55996 48392 43445 51942 52153 49123 56707 55116 55849 64636 61770 52035 52711 64674 58774 54966 63477 57997 53284 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223120000 12494 2629 11814 23951 19241 19241 1 9606 Homo sapiens 0.07453264102809953 IAGEASR Unmodified 702.36605 0.3660525 73;721 U3KQK0;A0A024QZZ7;A0A024RCJ9;A0A024RCL8;B2R4S9;B4DR52;I6L9F7;Q5QNW6-2;Q99879;Q99877;Q5QNW6;P62807;P58876;O60814;Q93079;P57053;A8K9J7;Q0D2M2;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q6DRA6;Q6DN03 HIST1H2BN;HIST1H2BD;HIST1H2BK;HIST1H2BI;HIST1H2BM;HIST2H2BF;HIST1H2BC;HIST1H2BH;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST2H2BD;HIST2H2BC Histone H2B;Histone H2B type 2-F;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-H;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Putative histone H2B type 2-D;Putative histone H2B type 2-C no no 0 0 0 3 1.41 1 1 1 1 1 30.684 30.742 2 0.0085426 5870 20230619_1882_Aki_TMTPro18x_K_F3 120.52 54.384 856520 427720 1843200 1652300 3200400 2296300 1636100 3409900 1091700 561950 1918600 2436600 658880 1494900 2492500 315140 1999000 1802900 797620 401760 1807500 1575600 3161100 2298000 1730000 3324800 1173000 773910 1881400 2355300 805180 1506900 2462800 426410 1916100 1697300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1394200000 12495 73;721 11815 23952;23953;23954;23955;23956 19242;19243;19244;19245 19244 4 9606 Homo sapiens 0.002964115950021551 IAGHPLAQNER Unmodified 1204.6313 0.63126874 882 Q3SYF1;A0A087X0R6;Q9UMY4;Q9UMY4-1;Q9UMY4-3 SNX12 Sorting nexin-12 yes no 0 0 0 6 0.816 1 1 1 32.262 32.332 3 2.2667E-12 6632 20230619_1886_Aki_TMTPro18x_K_F6 198.93 135.75 93943 75253 102890 109510 118480 135680 118790 122240 139580 99793 110480 118210 109460 100730 125700 100490 183150 126210 86924 69173 104060 108070 121880 134840 120390 125200 139740 102690 114780 118550 112680 104460 130530 102520 174280 119810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 191740000 12496 882 11816 23957;23958;23959 19246;19247;19248 19247 3 9606 Homo sapiens 0.03713835997791648 IAGLCNR Unmodified 802.41196 0.41195684 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2;B3KRI1;B2RAQ4;P50993;B1AKY9;A0A0S2Z3W6;H0Y7C1;B3KX35;B3KW93;B4DIQ8;Q13733;E9PRA5;A0A669K9X0 ATP1A1;ATP1A2;ATP1A4 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4 yes no 0 0 0 1 0 1 40.179 40.179 2 0.018751 10161 20230619_1880_Aki_TMTPro18x_K_F1 106.84 47.203 129740 93281 114510 139030 181810 196660 195770 186530 247600 144170 149140 142390 142570 125450 163240 150660 186250 142570 119760 85806 118800 137310 183960 194170 197960 190080 245040 148130 157380 144140 146820 131270 166810 150600 177670 135660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100800000 12497 3387 11817 23960 19249 19249 1 9606 Homo sapiens 0.0028473350558897437 IAGQVAAANK Unmodified 941.52943 0.52942943 2186 B0ZBD0;Q8WVX7;P39019;A0A075B6E2 RPS19 40S ribosomal protein S19 yes no 0 0 0 3.67 3.09 1 1 1 42.551 42.579 2;3 2.0279E-13 10521 20230619_1888_Aki_TMTPro18x_K_F8 219.72 166.93 140350 102920 175340 155920 255390 282350 205830 214210 248340 83081 109820 110690 97508 95766 188720 68206 125490 100500 129960 94686 176300 154680 257570 274220 211640 219940 244560 92189 118860 110670 104340 97792 186120 71203 120510 95209 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 305840000 12498 2186 11818 23961;23962;23963 19250;19251 19251 2 9606 Homo sapiens 0.056325896460293734 IAGYVTHLMK Oxidation (M) 1147.606 0.6059652 3066 H3BNC9;P08708;H0YN88;A0A075B716;A4D1Q6 RPS17;LOC392101 40S ribosomal protein S17 yes no 0 1 0 3 0 1 49.424 49.502 3 0.00019162 13887 20230619_1882_Aki_TMTPro18x_K_F3 115.78 80.27 753460 630430 708430 769150 965180 980470 855910 849690 1088400 385950 366840 265010 270080 232770 526050 347160 316550 219620 696460 578290 727510 768030 979100 972530 875880 864670 1064800 412660 405920 274240 291090 247110 517850 340520 304230 210310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 947420000 12499 3066 11819 23964 19252 19252 1789 1 9606 Homo sapiens 0.03806645151030352 IAGYVTHLMK Unmodified 1131.6111 0.61105057 3066 H3BNC9;P08708;H0YN88;A0A075B716;A4D1Q6 RPS17;LOC392101 40S ribosomal protein S17 yes no 0 0 0 4.5 0.5 1 1 55.845 55.881 3 9.4652E-05 16218 20230619_1885_Aki_TMTPro18x_K_F5 130.94 95.429 969980 843030 910100 856430 849350 1140200 1038300 995430 1214700 640990 624550 467170 641690 453240 815310 729830 573390 505490 896800 771920 928570 868100 894030 1127800 1041000 1017400 1202100 662750 668770 482980 662040 482860 812180 716720 550490 482750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2949699999.9999995 12500 3066 11819 23965;23966 19253;19254 19254 2 9606 Homo sapiens 0.05050949013639183 IAHFLDR Unmodified 870.47119 0.47118627 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;A0A7I2V3I2;H0YBP5;A0A7I2V4G3;E5RHS5;A0A161SXE1;A0A7I2V570;A0A7I2V3W9;E5RJ25;A0A7I2V2S9;E5RII3;E5RIP5 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 0 8 0 1 45.256 45.284 2 0.024502 11599 20230619_1888_Aki_TMTPro18x_K_F8 99.139 60.321 61516 38162 56827 65758 59254 64296 64490 63476 79184 72178 65997 68609 78238 59078 66135 85414 78044 78516 56761 35194 58206 64072 61518 65074 65168 65150 79329 72385 68880 69507 78856 62678 68228 84961 74560 74646 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69931000 12501 1659 11820 23967 19255 19255 1 9606 Homo sapiens 0.030769527914117134 IAHIMGPPDR Oxidation (M) 1121.5652 0.56516301 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73 KHSRP Far upstream element-binding protein 2 yes no 0 1 0 6 0.816 1 1 1 36.203 36.276 3 0.00022865 8028 20230619_1886_Aki_TMTPro18x_K_F6 113.15 87.325 48901 31085 49670 54759 59641 62389 67572 63638 67261 60555 71324 68470 65454 63793 59437 69333 79794 70536 45161 28673 50581 53418 61322 62505 67647 64853 68664 61614 72712 69022 66779 66210 61719 69631 76086 67017 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 318700000 12502 3197 11821 23968;23969;23970 19256 19256 1876 1 9606 Homo sapiens 0.009243038313798024 IAHIMGPPDR Unmodified 1105.5702 0.57024839 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 7.5 0.5 1 1 41.207 41.241 3 2.8663E-06 9960 20230619_1888_Aki_TMTPro18x_K_F8 165.58 153.72 75852 42867 69286 76217 72612 77023 83883 87911 96548 88089 89306 82445 101490 78337 81486 111100 90970 94326 69953 39569 71023 74201 75461 78026 84321 89043 97347 88848 92439 83905 102200 82693 83903 110090 86971 89756 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 257120000 12503 3197 11821 23971;23972 19257;19258 19258 2 9606 Homo sapiens 0.021686076940113708 IAHLAGVK Unmodified 807.49667 0.49667274 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 3 0 1 43.07 43.136 3 0.00016483 10968 20230619_1882_Aki_TMTPro18x_K_F3 116.54 66.503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12504 3440 11822 23973 19259 19259 1 9606 Homo sapiens 0.08522427313857861 IAIDNLEK Unmodified 914.5073 0.50729701 3827 Q12981;Q12981-1 BNIP1 Vesicle transport protein SEC20 yes no 0 0 0 5 0 1 52.662 52.734 3 0.051095 14946 20230619_1885_Aki_TMTPro18x_K_F5 52.482 7.7627 51923 42508 43277 48948 45846 57522 54511 51481 67634 55066 59600 58688 64188 48541 48876 67632 69533 72437 47946 38973 44768 49016 47745 57367 54845 53115 67796 55600 61701 59102 64622 51453 51214 67860 66349 68739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16572000 12505 3827 11823 23974 19260 19260 1 9606 Homo sapiens 0.04662365177614447 IAILGFAFK Unmodified 978.59024 0.59023878 3284 O60701;O60701-3;O60701-2;Q9NQ82 UGDH;GDH UDP-glucose 6-dehydrogenase yes no 0 0 0 6.5 0.5 1 1 64.743 64.779 2 0.01025 20268 20230619_1886_Aki_TMTPro18x_K_F6 84.699 39.21 40470 37225 36429 35923 43731 49290 45320 46522 59208 34973 40226 33830 42736 29456 33803 41521 40191 44648 37420 34064 37453 36591 44929 48778 46014 47391 58692 35978 42218 34302 43079 31209 34928 41676 38424 42358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60214000 12506 3284 11824 23975;23976 19261 19261 1 9606 Homo sapiens 0.10008726696264603 IAILTCPFEPPKPK Unmodified 1609.8902 0.89018555 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 1 3.75 0.433 1 3 67.935 67.937 3;4 1.1981E-05 18660 20230619_1882_Aki_TMTPro18x_K_F3 119.69 95.151 17819 15460 20866 18381 18357 18311 20461 19211 20792 23223 20926 19007 21874 17072 22708 22783 21761 20263 16506 14176 20887 18334 19294 18552 20527 19673 21188 23120 21500 19426 22322 17984 23024 22663 20819 19278 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 327310000 12507 2633 11825 23977;23978;23979;23980 19262;19263;19264 19262 3 9606 Homo sapiens 0.10963606124823855 IAIPGLAGAGNSVLLVSNLNPER Unmodified 2274.2696 0.26957993 1159;1980 P26599;P26599-2;A0A0U1RRM4;P26599-1;A0A7I2V621;K7EK45;A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 no no 0 0 0 3.5 0.5 1 1 64.331 64.352 3 1.01E-119 20135 20230619_1883_Aki_TMTPro18x_K_F4 365.38 339.65 42276 38418 44609 47699 35519 48397 47366 50026 52060 52541 57907 50861 65930 57944 50262 57970 63089 63246 39136 35237 45017 47422 37996 48900 47244 51056 53001 52923 59426 51987 66306 59547 52133 58532 60240 60015 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 509560000 12508 1159;1980 11826 23981;23982 19265;19266 19266 2 9606 Homo sapiens 0.183415918234914 IAIVNHDK Unmodified 908.50797 0.50796571 3692 P61221;D6R9I9;D6RGF4 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 0 0 7 0.816 1 1 1 39.959 40.006 3 0.0011282 9221 20230619_1887_Aki_TMTPro18x_K_F7 117.76 92.969 444060 309030 355500 391840 513170 520150 473350 472110 631450 492510 532050 517830 581010 484350 496500 522900 626350 553510 409550 283790 371050 390530 519620 515220 484240 486050 630080 497820 552510 523490 587520 502860 513620 526540 597520 525670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1000499999.9999999 12509 3692 11827 23983;23984;23985 19267;19268 19267 2 9606 Homo sapiens 0.050052046173163944 IAIWTTECENR Unmodified 1391.6503 0.65034921 3393 P06730;P06730-2;Q32Q75;X5D7E3;D6RBW1;P06730-3 EIF4E Eukaryotic translation initiation factor 4E yes no 0 0 0 5 0.816 1 1 1 53.864 53.906 2 6.913200000000001E-57 15569 20230619_1886_Aki_TMTPro18x_K_F6 280.94 249.07 334760 280540 305450 291650 265780 309240 314580 303310 318850 409520 351940 368950 424840 343180 354230 455480 404480 411410 309370 256950 312050 294080 280660 311360 314620 313100 326490 406790 362840 375480 427830 360860 364780 453150 386560 391200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 596490000 12510 3393 11828 23986;23987;23988 19269;19270;19271 19271 3 9606 Homo sapiens -0.0298099549345352 IAIYELLFK Unmodified 1108.6532 0.65323296 3594;1322 A0A1W2PQS6;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A2R8Y6L3;P46783;Q59GE4 RPS10 40S ribosomal protein S10 no no 0 0 0 4 0.816 1 1 1 65.805 65.835 2 0.00022558 20733 20230619_1883_Aki_TMTPro18x_K_F4 166.68 120.31 299740 228510 251670 267190 201900 274000 265960 258350 315720 289220 271980 281510 310330 286780 342080 327480 284860 348120 276680 209600 259060 266790 215970 276110 266010 265900 317070 290530 282990 286330 317130 297770 344070 329650 273540 330200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 240330000 12511 1322;3594 11829 23989;23990;23991 19272;19273 19273 2 9606 Homo sapiens 0.10325247693663187 IALLEEAK Unmodified 885.51713 0.51713341 2184 P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;P35241-2 RDX Radixin yes no 0 0 0 6 0 1 57.739 57.807 2 0.00056579 17209 20230619_1886_Aki_TMTPro18x_K_F6 161.11 105.67 272640 252580 273720 295060 218240 276950 284070 268440 297030 310910 308190 243170 298570 219940 275210 363220 304730 264470 252320 231510 277300 294300 233080 281220 283100 276060 302370 309850 314820 249550 303710 235290 282380 356900 291000 252390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83566000 12512 2184 11830 23992 19274 19274 1 9606 Homo sapiens 0.06979553182998188 IALLEEAKK Unmodified 1013.6121 0.61209643 2184 P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;P35241-2 RDX Radixin yes no 0 0 1 8 0 1 53.71 53.781 3 0.00096837 15173 20230619_1888_Aki_TMTPro18x_K_F8 94.409 68.601 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12513 2184 11831 23993 19275 19275 1 9606 Homo sapiens 0.10583486654184071 IALLEEARR Unmodified 1069.6244 0.62439245 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;B7Z9R6 EZR;HEL-S-105 Ezrin yes no 0 0 1 7.5 0.5 1 1 46.889 46.957 3 5.5769E-05 12176 20230619_1887_Aki_TMTPro18x_K_F7 149.57 99.219 136230 160910 156510 153650 218360 171950 194740 193900 184430 162790 161230 152620 173760 131550 198520 188800 186120 158610 126470 147130 158140 156180 220600 173280 197390 195710 187600 165850 167120 154820 178020 139450 200680 187150 178010 151070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72628000 12514 3456 11832 23994;23995 19276;19277 19276 2 9606 Homo sapiens 0.09236523117237994 IALLPLLQAETDRR Unmodified 1607.9359 0.93589019 4639 Q9P0J0;Q9P0J0-2;B4DEZ3;K7EJE1;E7ENQ6;B4DQP1;U3KQP3 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes no 0 0 1 3 0 1 62.044 62.073 3 1.0127E-29 19276 20230619_1882_Aki_TMTPro18x_K_F3 265.34 231.47 237390 226050 257180 293810 343860 375620 303470 305360 310030 251720 271640 250390 290260 251910 281420 287520 261300 255880 219880 207390 261130 292070 349100 371960 308540 315370 313900 257420 281260 254520 295240 261620 285250 286620 250170 243400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53347000 12515 4639 11833 23996 19278;19279 19278 2 9606 Homo sapiens 0.1562396763142715 IALTDNALIAR Unmodified 1169.6768 0.67682195 3473;3341 P18124;A0A024R814;A8MUD9;O95036 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 no no 0 0 0 5.33 3.09 1 1 1 55.154 55.197 2 0.00023774 15736 20230619_1888_Aki_TMTPro18x_K_F8 146.68 122.65 654180 585090 601350 676610 640390 693930 725190 694870 740980 738440 742600 723340 794820 654450 794910 776720 704950 746210 604850 536290 616340 676120 664250 700590 726760 711130 754240 743470 764210 732790 809230 683910 803270 777000 675640 708920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2793900000 12516 3473;3341 11834 23997;23998;23999 19280;19281;19282 19282 3 9606 Homo sapiens 0.09877061460178993 IALYCHQLNICSK Unmodified 1618.796 0.79596759 1411;3506 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;P35221-3;B3KSR8;P26232-2;P26232-5;P26232;Q49AD3;F6KRI5;A0A0A0MRI5;P26232-4;P26232-6;B7Z259 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 0 4 0 1 51.993 52.021 3 0.00033977 14951 20230619_1883_Aki_TMTPro18x_K_F4 94.122 75.526 63585 51983 58783 53682 51908 63656 65653 58363 77944 62289 59232 56340 71909 49422 50709 67454 73460 66938 58758 47615 59991 54247 54905 63500 65758 60106 77931 62601 62165 57254 71933 52226 53280 67411 70021 63607 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110900000 12517 1411;3506 11835 24000 19283 19283 1 9606 Homo sapiens 0.011321440311121478 IALYETPTGWK Unmodified 1277.6656 0.66558856 1521 A0A3B3ITK7;P36871;B4DFP1;B7Z6C2;P36871-3;P36871-2;B4DDQ8;Q9H1D2 PGM1 Phosphoglucomutase-1 yes no 0 0 0 2 0 1 60.493 60.505 3 0.0053837 18818 20230619_1881_Aki_TMTPro18x_K_F2 80.763 54.825 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12518 1521 11836 24001 19284 19284 1 9606 Homo sapiens 0.03786239366013433 IALYGLGSIPDER Unmodified 1402.7456 0.7456298 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2;Q05D78;Q9BS79;F5GXT0 MRE11A Double-strand break repair protein MRE11A yes no 0 0 0 7 0 1 61.37 61.409 2 3.3004E-07 18395 20230619_1887_Aki_TMTPro18x_K_F7 146.71 127.93 148730 130870 130390 151580 131300 185870 150520 151880 174930 164720 167270 165260 178280 157340 173050 195570 173920 190510 137450 119970 134170 151800 137230 184480 151420 157850 176520 165870 172480 167550 181400 164560 176240 195570 166510 180940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 310070000 12519 229 11837 24002 19285 19285 1 9606 Homo sapiens 0.060366809692368406 IAMENDDGRTEEEK Oxidation (M) 1651.6995 0.69954382 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;A0A024QZ91;A0A024QZC0;Q8WWM7-7;H3BSK9 ATXN2L Ataxin-2-like protein yes no 0 1 1 1 0 1 35.95 35.95 3 0.0025537 8350 20230619_1880_Aki_TMTPro18x_K_F1 91.993 83.816 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12520 4285 11838 24003 19286 19286 2716 1 9606 Homo sapiens -0.10023796785799277 IANAYIIK Unmodified 904.5382 0.53820321 2879 H0YB03;H0YB83;E5RH53;Q96DB5;H0YC67 RMDN1 Regulator of microtubule dynamics protein 1 yes no 0 0 0 3 0 1 53.975 54.027 2 0.0014378 15936 20230619_1882_Aki_TMTPro18x_K_F3 142.64 67.325 63755 66096 57038 63282 90004 120520 92225 87575 124330 31171 30400 29313 29336 23288 47754 26920 32198 23461 59000 60457 59083 64890 91174 116730 93712 90204 120790 34681 35598 29683 30874 24417 47257 26873 30897 22352 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43261000 12521 2879 11839 24004 19287 19287 1 9606 Homo sapiens 0.0821156328250936 IANDNSLNHEYLPILGLAEFR Unmodified 2398.2281 0.22810904 1234 Q2TU84;A0A140VK69;P17174;P17174-2 GIG18;GOT1 Aspartate aminotransferase;Aspartate aminotransferase, cytoplasmic yes no 0 0 0 8 0 1 63.353 63.376 3 3.0369E-45 19268 20230619_1888_Aki_TMTPro18x_K_F8 252.55 233.13 50977 40991 50810 49482 46335 44767 50957 49206 41134 60037 60446 70192 59820 49759 61064 58509 56152 78997 47131 37603 51541 49235 48522 45757 50849 50272 43314 60336 61169 70042 61103 52498 61795 59804 53931 74731 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191680000 12522 1234 11840 24005 19288 19288 1 9606 Homo sapiens 0.08492411064162297 IANLAYVTK Unmodified 991.57023 0.57023162 1782 A0A8I5KZ07;Q5JR04;A0A8I5KXC3;Q9HCE1-2;Q9HCE1;Q9H8T8;B7Z700;A0A8I5QKW4 MOV10 Putative helicase MOV-10 yes no 0 0 0 3 0 1 55.781 55.822 2 0.00032496 16698 20230619_1882_Aki_TMTPro18x_K_F3 111.61 70.18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12523 1782 11841 24006 19289 19289 1 9606 Homo sapiens 0.0741093096565919 IANLLKPDK Unmodified 1010.6124 0.61243078 3420 P09455;A0A0A0MQT0;A0A0A0MTB9;H0YAK8;P09455-2;P09455-3 RBP1 Retinol-binding protein 1 yes no 0 0 1 4 0 1 52.891 52.914 3 0.0060296 15311 20230619_1883_Aki_TMTPro18x_K_F4 82.261 51.648 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12524 3420 11842 24007 19290 19290 1 9606 Homo sapiens 0.1075490637402936 IANLQTDLSDGLR Unmodified 1414.7416 0.74160705 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98 FLNA Filamin-A yes no 0 0 0 5.5 0.5 1 1 58.329 58.391 2 4.5647E-36 17451 20230619_1886_Aki_TMTPro18x_K_F6 284.73 220.24 114300 102640 129770 132930 158270 192260 170400 148370 173360 162850 182770 171270 156950 141840 258180 135340 130260 146690 105880 94181 131040 132480 162520 188840 171140 155010 176760 164120 186100 172440 165710 146910 253020 137170 125980 139150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106690000 12525 3484 11843 24008;24009 19291 19291 1 9606 Homo sapiens 0.050825914755023405 IANPVEGSSGR Unmodified 1085.5465 0.54653606 3929 Q15365;Q53SS8 PCBP1 Poly(rC)-binding protein 1 yes no 0 0 0 5 0.816 1 1 1 38.776 38.848 2 1.1686E-08 9027 20230619_1883_Aki_TMTPro18x_K_F4 213.8 176.7 398800 272670 363270 378730 483920 484960 442780 445930 539940 438650 516960 500840 516460 431690 439580 461360 565440 471710 368110 250670 373830 375050 491830 481450 451790 457990 543340 445820 531250 503360 523530 449150 455360 463750 539150 448270 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 2176600000 12526 3929 11844 24010;24011;24012 19292;19293;19294;19295;19296 19293 5 9606 Homo sapiens 0.00718465461204687 IANPVEGSTDR Unmodified 1157.5677 0.56766543 3930 Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DRD7;H3BSS4;F8VRH0 PCBP2 Poly(rC)-binding protein 2 yes no 0 0 0 3 0.816 1 1 1 40.145 40.201 2 1.0478E-16 9864 20230619_1881_Aki_TMTPro18x_K_F2 228.64 195.8 791510 619720 652190 731860 815980 863070 860780 802150 1039800 948900 987550 882130 1045900 815880 747120 1074500 1034200 875270 730630 568430 677070 731620 836080 861600 870480 827620 1046900 949460 1017100 896950 1051200 857560 782580 1063600 985630 834030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2465800000 12527 3930 11845 24013;24014;24015 19297;19298;19299 19297 3 9606 Homo sapiens -0.00481569229964407 IAPAEAPDAK Unmodified 981.51311 0.51311067 3211 O00425;O00425-2 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes no 0 0 0 3 0 1 43.401 43.471 2 0.033217 11119 20230619_1882_Aki_TMTPro18x_K_F3 67.897 26.868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12528 3211 11846 24016 19300 19300 1 9606 Homo sapiens 0.021614636892763883 IAPELYHK Unmodified 969.52837 0.5283668 3911 Q15046;Q15046-2;Q6ZTI3 KARS Lysine--tRNA ligase yes no 0 0 0 7.5 0.5 1 1 45.74 45.803 3 0.00071387 11623 20230619_1887_Aki_TMTPro18x_K_F7 125.31 51.014 336480 267930 286330 320560 367790 416620 363820 338900 411360 381300 399550 373710 401150 329260 373480 424300 426690 385020 310700 245770 296500 320590 375720 412210 368430 352740 415910 383000 410400 378400 408020 346140 383470 422530 407450 366270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 566620000 12529 3911 11847 24017;24018 19301;19302 19301 2 9606 Homo sapiens 0.04238375277122941 IAPETAVK Unmodified 827.47527 0.4752686 2648 B7ZB41;B4E290;Q6NUK1-2;Q6NUK1 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes no 0 0 0 6 0 1 44.131 44.222 2 0.011039 11332 20230619_1886_Aki_TMTPro18x_K_F6 92.47 35.367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12530 2648 11848 24019 19303 19303 1 9606 Homo sapiens 0.05462997494475985 IAPPEAPVTGYMFGK Oxidation (M) 1592.7909 0.79086543 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 1 0 1.5 0.5 1 1 58.233 58.24 3 0.00054146 17768 20230619_1880_Aki_TMTPro18x_K_F1 80.96 64.186 168090 128290 114910 218630 175260 178970 137210 143580 163080 212180 193590 178680 186020 168630 209350 245130 186970 192190 154960 118190 122630 212490 176330 183120 141390 151070 166210 209710 196820 182680 191230 178230 211450 242040 179140 183090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 409530000 12531 261 11849 24020;24021 19304 19304 153 1 9606 Homo sapiens 0.018181634400662006 IAPPEAPVTGYMFGK Unmodified 1576.796 0.79595081 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 2 0 1 61.944 61.954 3 6.1398E-14 19443 20230619_1881_Aki_TMTPro18x_K_F2 173.68 132.2 487950 424590 473770 531530 413920 548620 528220 482840 522400 620490 563620 582650 664540 579450 593130 676700 605990 699650 451260 389520 482040 528120 438360 551770 525860 501710 534800 618520 580970 593040 671690 603030 605590 679510 580330 663950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2624800000 12532 261 11849 24022 19305 19305 1 9606 Homo sapiens 0.03062467302697769 IAPQYYDMSNFPQCEAK Oxidation (M) 2076.8921 0.89211239 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 1 0 6 0 1 54.652 54.729 3 0.043571 15915 20230619_1886_Aki_TMTPro18x_K_F6 41.695 31.037 27267 21144 27628 27805 26415 34110 28544 27343 24947 35179 34068 30274 31701 27004 28500 33713 30647 34707 25208 19416 28024 27609 27615 33843 28564 28609 26028 34968 34396 30852 32272 28327 29187 33810 29330 32940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11611000 12533 3246 11850 24023 19306 19306 1913 1 9606 Homo sapiens -0.10325797710129336 IAPQYYDMSNFPQCEAK Unmodified 2060.8972 0.89719777 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 7.5 0.5 1 1 58.922 58.968 3 2.5894E-13 17314 20230619_1887_Aki_TMTPro18x_K_F7 146.2 138.5 102820 90548 105050 113170 91071 99392 104210 102600 102770 185740 173680 187850 208060 173650 145810 214940 192090 237250 95138 83064 106360 112260 96013 101660 104370 106840 107990 183170 176390 190060 208280 181850 152320 216350 183650 224940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 231830000 12534 3246 11850 24024;24025 19307;19308;19309 19307 3 9606 Homo sapiens -0.09081493847543243 IAPVFFR Unmodified 848.49086 0.49085908 1183 A0A140VJL0;Q6NVY1;Q6NVY1-2;B8ZZZ0;H7BYI7 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 57.765 57.829 2 0.0059043 17004 20230619_1885_Aki_TMTPro18x_K_F5 137.2 87.891 96562 79297 92234 97931 111790 139770 133070 130630 153800 81883 76750 77193 82415 72097 102120 95836 91215 88449 89257 72753 94434 97913 115290 137870 133470 132740 152220 85365 82690 78485 84921 75780 102860 95534 87360 84098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84492000 12535 1183 11851 24026;24027 19310 19310 1 9606 Homo sapiens 0.06055328802187887 IAPYSVEIK Unmodified 1018.5699 0.56989727 3758 P78527;P78527-2;B4DL41;F5GX40 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7.67 0.471 1 2 54.4 54.466 2;3 0.00018282 15467 20230619_1888_Aki_TMTPro18x_K_F8 128.38 68.583 352030 319090 346200 380000 365780 400970 418890 376480 413750 479530 423010 447940 499230 419060 350940 573190 554740 555180 325690 292550 352700 379040 379680 403400 419060 389190 422710 478070 436950 455250 500250 441440 371940 571790 528810 527500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 366110000 12536 3758 11852 24028;24029;24030 19311;19312 19312 2 9606 Homo sapiens 0.06135511245804537 IAQDLEMYGINYFEIK Unmodified 1945.9496 0.94955092 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;J7M2B1 EZR;HEL-S-105;EZR-ROS1 Ezrin;Tyrosine-protein kinase receptor yes no 0 0 0 7.5 0.5 1 1 65.533 65.555 3 0.00021371 20337 20230619_1887_Aki_TMTPro18x_K_F7 89.358 77.443 35966 40711 25666 41486 42452 34563 29882 39967 33393 41878 42905 39087 48220 44600 47861 52304 60076 49106 33258 37247 27253 41745 42366 35659 31000 40491 34265 42117 43790 40035 49065 46216 49367 52248 57286 46715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99327000 12537 3456 11853 24031;24032 19313 19313 1 9606 Homo sapiens 0.014414125577559389 IAQITGPPDR Unmodified 1066.5771 0.57710791 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 6.5 0.5 1 1 44.619 44.706 2 4.6545E-05 11512 20230619_1886_Aki_TMTPro18x_K_F6 170.5 144.94 531120 423250 485100 486550 576150 582410 594010 550580 594130 619010 612630 600580 669700 558260 532140 720450 709660 658730 490680 388090 497960 487580 591280 581180 597830 566520 606380 621350 630020 609340 675250 585820 554350 717370 676930 626510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1050199999.9999999 12538 2644;4322 11854 24033;24034 19314;19315 19314 2 9606 Homo sapiens 0.04648243846236255 IAQLEEQLDNETK Unmodified 1529.7573 0.7573167 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 0 3 0 1 60.249 60.278 3 0.069811 18547 20230619_1882_Aki_TMTPro18x_K_F3 40.577 27.81 0 7254.4 12161 18635 7682.4 18929 0 12937 8242.5 8785.2 10426 16907 13536 10799 6953.2 13815 7384.1 13185 0 6703 11316 17845 8202.4 18929 0 13500 8030.7 9341.6 10759 16575 13394 11493 7251 13779 7101 12508 0 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 121840000 12539 148 11855 24035 19316 19316 1 9606 Homo sapiens 0.01362833201869762 IAQLICER Unmodified 1001.5328 0.53280025 3541 P33316-2;H0YNW5;P33316;H0YKC5;A0A0C4DGL3;H0YMP1 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes no 0 0 0 7.5 0.5 1 1 52.203 52.278 2 0.0019712 14483 20230619_1888_Aki_TMTPro18x_K_F8 134.15 95.359 1455500 1151400 1186700 1234100 1163700 1418500 1245200 1219300 1515400 1025400 975970 794860 977320 800790 1070900 1069000 1034600 755970 1343500 1055100 1227800 1242300 1214900 1415900 1259000 1254400 1505700 1041000 1025900 818730 1001900 839890 1085200 1052600 988330 722360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3943899999.9999995 12540 3541 11856 24036;24037 19317;19318 19318 2 9606 Homo sapiens 0.03209516428398729 IAQPHHGVPYFR Unmodified 1420.7364 0.73640252 2100 B4DMI9;A8K732;Q15398-1;Q15398-3;Q15398 DLGAP5 Disks large-associated protein 5 yes no 0 0 0 3 0 1 38.212 38.266 4 8.7847E-05 8889 20230619_1882_Aki_TMTPro18x_K_F3 116.55 99.521 16385 12224 18409 14673 18433 17845 13097 14951 23580 14904 17485 13160 16718 13872 13395 14715 15732 15719 15158 11216 18500 14668 19000 17747 13852 15466 23160 15038 18153 13481 16930 14337 13816 14827 15030 14920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25975000 12541 2100 11857 24038 19319 19319 1 9606 Homo sapiens 0.04286377194216584 IAQPNYIPTQQDVLR Unmodified 1754.9315 0.93153309 3738 P63096;P63096-2;A0A3B3ITM0 GNAI1 Guanine nucleotide-binding protein G(i) subunit alpha-1 yes no 0 0 0 8 0 1 54.315 54.386 2 1.567E-13 15435 20230619_1888_Aki_TMTPro18x_K_F8 170.4 116.34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12542 3738 11858 24039 19320 19320 1 9606 Homo sapiens 0.08426458417875438 IAQSDYIPTQQDVLR Unmodified 1745.8948 0.89481323 3385 P04899-4;P04899;Q96C71;P04899-2;B3KX51;P04899-6;P04899-3;P04899-5;B3KP24;Q93020 GNAI2;WUGSC:H_LUCA16.1 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes no 0 0 0 6 0 1 54.308 54.385 2 1.3691999999999998E-19 15757 20230619_1886_Aki_TMTPro18x_K_F6 228.78 177.34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12543 3385 11859 24040 19321 19321 1 9606 Homo sapiens 0.051701618012884865 IASDGLK Unmodified 702.3912 0.39120462 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;B7Z3M5;D6RB09;E9PFI5;H0Y9Y4;H0Y8L7;D6RAS7;D6RED7;D6RI02;D6RGE0 RPS3A 40S ribosomal protein S3a yes no 0 0 0 6 0 1 44.256 44.347 2 0.022901 11371 20230619_1886_Aki_TMTPro18x_K_F6 107.32 19.288 254490 114490 299940 315050 418570 434350 337850 420580 340910 318020 464290 457560 367880 366030 413620 168650 461250 375640 235010 106660 302740 302840 422820 429430 345780 427580 351810 331020 466390 454680 380980 370130 420990 185150 440270 354910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 439660000 12544 3694 11860 24041 19322 19322 1 9606 Homo sapiens 0.028104663975682342 IASFPTAK Unmodified 833.4647 0.46470391 753 A0A024RD99;B7Z2D8;B7Z5F9;B3KP14;H0Y8R1;B7Z3R7;H0YAK1;B3KW50;Q12849-5;Q12849 GRSF1 G-rich sequence factor 1 yes no 0 0 0 2.5 0.5 1 1 50.44 50.491 2;3 1.6478E-05 14312 20230619_1882_Aki_TMTPro18x_K_F3 157.33 80.482 32206 21840 27419 32380 31246 36893 31092 32133 40296 37914 35007 39430 39961 33012 34720 43829 43219 43325 29711 20094 28340 31871 32196 36837 31643 33309 40335 38063 36409 39733 40385 34840 35917 43813 41271 41155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36943000 12545 753 11861 24042;24043 19323;19324 19324 2 9606 Homo sapiens 0.04131014840049829 IASGLGLAWIVGR Unmodified 1311.7663 0.76630566 549 Q53GB9;A0A024R8Z1;Q5VV89;O14880;Q5VV87 MGST3 Microsomal glutathione S-transferase 3 yes no 0 0 0 7 0 1 64.305 64.334 2 4.9335E-06 19797 20230619_1887_Aki_TMTPro18x_K_F7 140.49 107.67 178720 133130 180280 213130 206260 226500 255690 243430 263290 209750 235550 260320 255450 241750 209380 216610 229190 251470 165170 122560 183650 208710 213430 228280 255070 246690 266490 215400 244010 261250 258060 248560 214850 220060 219250 238400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1079700000 12546 549 11862 24044 19325 19325 1 9606 Homo sapiens 0.12289316139526818 IASHPAEQYVSK Unmodified 1328.6725 0.67246486 1983 A6NMZ7-2;A6NMZ7 COL6A6 Collagen alpha-6(VI) chain yes no 0 0 0 7 0 1 40.404 40.471 3 0.00067685 9472 20230619_1887_Aki_TMTPro18x_K_F7 91.914 67.843 30651 20607 27257 30693 36243 42575 37790 34684 49385 37564 41866 35246 37105 34282 34237 39622 47925 33864 28285 18961 28135 30300 37023 41948 38344 36053 49309 37780 43048 35883 37923 35658 35644 39400 45625 32276 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22446000 12547 1983 11863 24045 19326 19326 1 9606 Homo sapiens 0.021275522466112307 IASLEVENQSLR Unmodified 1357.7201 0.72014333 2288;2925 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;H0YCK7;E9PIZ1;P29692;P29692-3;E9PK01;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;E9PMW7;E9PN91 EEF1D Elongation factor 1-delta no no 0 0 0 4 0.707 1 2 1 51.612 51.661 2;3 1.2916E-63 14730 20230619_1883_Aki_TMTPro18x_K_F4 285.83 184.53 394910 314210 341840 352710 365380 452510 448000 397780 445930 491550 461480 456510 500460 415080 426340 529190 474640 485210 364690 288050 352210 354420 380280 448710 446720 412680 455360 490660 474420 463660 505960 435600 438080 527210 453740 461280 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2812600000 12548 2288;2925 11864 24046;24047;24048;24049 19327;19328 19327 2 9606 Homo sapiens 0.05559206446787357 IASLLGLLSK Unmodified 1013.6485 0.64848194 1747 Q96HW7;A0A8Q3SHR8;A8K4A1;A0A8V8TLR7;A0A8Q3WKC9;A0A8Q3WKC3;A0A8Q3WKB9;A0A8Q3WKC7;A0A8Q3SHL8;A0A8Q3SHK8;A0A8Q3SHM4;A0A8Q3SHT4;A0A8C8UVZ7;A0A8Q3WKW5;A0A8Q3WKB5;A0A8Q3WKC2;A0A8Q3SII1;Q96HW7-2;F8WAA7 INTS4 Integrator complex subunit 4 yes no 0 0 0 7 0 1 65.966 65.991 3 0.0012797 20498 20230619_1887_Aki_TMTPro18x_K_F7 100.48 50.193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12549 1747 11865 24050 19329 19329 1 9606 Homo sapiens 0.14220363550919046 IASMAPGALLLEAQK Unmodified 1511.8381 0.83814998 4499 Q9H269 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes yes 0 0 0 2 0 1 63.104 63.113 3 2.9213E-05 20018 20230619_1881_Aki_TMTPro18x_K_F2 97.631 79.218 33273 26446 30466 35166 34706 38290 39889 35781 45677 37436 40550 34882 40167 32029 41383 41297 40514 39276 30740 24285 31279 34827 35862 38420 40078 36785 45972 37690 41799 35463 41050 33634 42011 41239 38764 37330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22289000 12550 4499 11866 24051 19330 19330 1 9606 Homo sapiens 0.10270442711112082 IASNAGSIA Unmodified 802.41848 0.418482 153 Q9BTQ7;A0A024R1Q8;P62829;J3KTJ3 RPL23 60S ribosomal protein L23 yes no 0 0 0 5 0.816 1 1 1 46.11 46.179 2 0.0026512 12110 20230619_1885_Aki_TMTPro18x_K_F5 104.45 83.294 174220 141510 200430 197840 235180 275040 225240 242830 268810 177850 196260 179830 189420 170450 214990 172110 204930 190090 161290 130010 201960 196120 241370 271390 229040 248460 268220 183480 204450 182260 194840 176220 217360 174100 196070 180410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1109900000 12551 153 11867 24052;24053;24054 19331;19332 19332 2 9606 Homo sapiens 0.009369499379431545 IASPEGQDYLK Unmodified 1219.6085 0.60846762 4728 Q9Y3I0;B4DNA0 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 4.5 0.5 1 1 50.525 50.579 3 0.00033001 14004 20230619_1885_Aki_TMTPro18x_K_F5 100.09 66.125 154430 138070 165630 148120 146230 181510 172100 166870 194040 205360 219130 216540 240470 186610 218040 269360 223840 210650 142970 126470 166950 149300 154260 180690 172770 172500 197500 205810 224570 218450 243540 197830 222720 265930 214020 200750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 417790000 12552 4728 11868 24055;24056 19333 19333 1 9606 Homo sapiens 0.007447720896607279 IASQMITEGR Unmodified 1104.5597 0.55974328 1127 B3KM48;A0A0S2Z5H7;D6RAX7;Q9BT78;Q53FV3;D6RFN0;D6RD63 COPS4 COP9 signalosome complex subunit 4 yes no 0 0 0 6.5 0.5 1 1 45.987 46.074 2 0.00024767 12166 20230619_1886_Aki_TMTPro18x_K_F6 135.43 97.295 188520 165690 187050 198170 214900 230500 215260 200180 253980 220740 256660 250610 264430 207590 236040 274970 272830 279130 174390 151930 190610 197880 221010 229980 218200 207220 256550 222990 263490 251730 268200 219190 242770 275350 260730 265050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 225820000 12553 1127 11869 24057;24058 19334;19335 19334 2 9606 Homo sapiens 0.011645802489056223 IASWADLVNAHVVPGSGVVK Unmodified 2018.0949 0.094910023 2076 A8K5J1;P11172;B5LY71;P11172-3;B5LY64;P11172-2;B5LY70 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase;Orotidine 5'-phosphate decarboxylase yes no 0 0 0 3.5 0.5 1 1 62.428 62.446 3 4.0934E-16 19364 20230619_1883_Aki_TMTPro18x_K_F4 154.26 136.78 110400 97747 104720 111620 97055 121700 114420 112400 111760 138100 141010 142510 142510 127390 141220 151310 149670 163730 102090 89587 106800 111740 101980 122080 114330 116160 115280 138270 143400 143960 145370 133170 144150 152330 143220 155330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59114000 12554 2076 11870 24059;24060 19336 19336 1 9606 Homo sapiens 0.12658636468881923 IATGHGQQGVTQVVLK Unmodified 1634.9104 0.91040372 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 2 0 1 45.671 45.752 3 5.4147E-11 12482 20230619_1881_Aki_TMTPro18x_K_F2 149.22 109.71 103380 75668 94802 110940 98070 102270 105510 105980 118880 91912 102440 98119 90388 87208 108160 101340 111530 115330 95467 69585 97153 108980 101790 104140 106380 107680 119600 93872 105370 99006 93565 91041 109820 102410 106710 109380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181810000 12555 1331 11871 24061 19337 19337 1 9606 Homo sapiens 0.11834493109017785 IATGSFLK Unmodified 835.48035 0.48035398 3489 P22234;P22234-2;E9PBS1;B4DGX3;D6RF62 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 3 0.816 1 1 1 53.624 53.657 2 0.0013444 15783 20230619_1882_Aki_TMTPro18x_K_F3 159.2 67.29 1251800 1000700 1141400 1125400 1115400 1450500 1223100 1075500 1423900 580370 644470 426300 528010 404550 1011700 667090 658880 432120 1156500 917370 1168400 1130600 1165800 1433000 1232600 1111900 1405100 610450 692400 440700 565400 431880 998780 654140 632250 413750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1335400000 12556 3489 11872 24062;24063;24064 19338;19339 19339 2 9606 Homo sapiens 0.05603301357098189 IATITTTHTPSQQGTQETR Unmodified 2070.0342 0.03416026 803 A0A087WT53;V9P4H4;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7;A0A087WXD2;H7C5T8;H7C4U7;H7C535;A0A455I2N7;Q96QZ7-4;Q96QZ7-3;Q96QZ7-5 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 yes no 0 0 0 7 0 1 38.495 38.558 3 2.4237E-31 8653 20230619_1887_Aki_TMTPro18x_K_F7 231.77 214.83 10356 7986.2 5874.3 8419.8 6628.8 6863.8 6178.5 7233.5 5634.1 8843.6 8783.8 6772 9176.3 9285.1 6738.9 8935.6 9173.8 8632.8 9537.8 7318.1 6363.9 8448.1 6820.6 7073.5 6246.6 7406.6 5911.4 8784.4 8864.9 7061.4 9247.3 9472.2 7041.7 8963.2 8750.2 8204.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31570000 12557 803 11873 24065 19340 19340 1 9606 Homo sapiens 0.04194454627986488 IATLISSFLK Unmodified 1091.659 0.65904662 1553 O95394-4;J3KN95;H0Y987;A0A8V8TMH7;B3KN28;A0A8V8TLT8;A0A494C1Q4;A0A8V8TNH4;A0A494C1E2;A0A8V8TMI1;O95394;O95394-3;A0A087WT27;A0A494C0G1 PGM3 Phosphoacetylglucosamine mutase yes no 0 0 0 7.5 0.5 1 1 66.599 66.62 3 0.023232 20604 20230619_1888_Aki_TMTPro18x_K_F8 60.102 40.49 22350 19054 22973 41332 20910 23315 25081 25389 30720 26839 31254 28998 31348 28543 28967 32539 36947 31492 20677 17612 23364 39603 22001 24958 25227 25876 30977 27122 32029 29345 31899 29658 29954 32568 35236 29942 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20165000 12558 1553 11874 24066;24067 19341;19342 19342 2 9606 Homo sapiens 0.11688346205323796 IATTTASAATAAAIGATPR Unmodified 1714.9214 0.92136233 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 3.5 0.5 1 1 53.147 53.186 3 1.8428E-60 15432 20230619_1883_Aki_TMTPro18x_K_F4 234.04 203.96 88650 61321 68749 67646 100840 250310 91437 82208 245160 74311 73956 79584 89602 69477 86698 94806 72900 78762 81741 56239 72149 70014 103460 234980 97239 95282 233670 76290 84601 80245 90841 73340 87499 93949 69924 74957 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 474220000 12559 349;3906 11875 24068;24069 19343;19344 19344 2 9606 Homo sapiens 0.09249850692663131 IAVAAQNCYK Unmodified 1136.5648 0.56482866 3674 V9HWK1;P60174;P60174-3;B4DUI5;Q53HE2;Q2QD09 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 1.5 0.5 2 2 46.295 46.335 2;3 3.8797E-07 12708 20230619_1881_Aki_TMTPro18x_K_F2 218.79 171.71 723130 591130 593360 603260 821140 996540 745880 749860 1055500 442650 455740 407750 410310 377910 589310 459470 525870 362410 667660 541410 617150 613500 834540 972070 765360 774580 1032000 464260 493840 415040 429220 394860 591810 455500 502630 345850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3381399999.9999995 12560 3674 11876 24070;24071;24072;24073 19345;19346 19346 2 9606 Homo sapiens 0.002008841115184623 IAVAHNGELVNAAR Unmodified 1433.7739 0.77391024 2042 Q53H22;A8K4H7;Q06203;D6RCC8 PPAT Amidophosphoribosyltransferase yes no 0 0 0 7.5 0.5 1 1 40.258 40.286 3 5.6814E-17 9384 20230619_1887_Aki_TMTPro18x_K_F7 214 178.55 74684 56009 66966 57798 68229 77847 76979 73605 95085 85382 87797 103500 92039 82250 93182 110950 95251 91436 68963 51320 68638 58542 71069 77119 77659 75793 95534 86228 90731 103510 93891 86988 94948 109900 91090 87067 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208010000 12561 2042 11877 24074;24075 19347 19347 1 9606 Homo sapiens 0.0743742366917104 IAVALGENHSR Unmodified 1165.6204 0.62036971 2014 Q6PKD4;A8K2A8;O94829 IPO13 Importin-13 yes no 0 0 0 7 0 1 39.961 40.026 3 1.5925E-12 9277 20230619_1887_Aki_TMTPro18x_K_F7 180.66 145.04 53678 35197 36514 47122 54399 53665 55460 55343 66631 48574 60358 59117 62697 49484 59801 65505 79574 60329 49442 32350 38851 46677 55125 53813 56173 56244 66929 49802 62320 59260 63780 52208 61974 65265 75812 57426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55664000 12562 2014 11878 24076 19348 19348 1 9606 Homo sapiens 0.04418433623504825 IAVEAQNKYER Unmodified 1319.6834 0.68336389 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 7 0 1 41.788 41.859 3 0.0018885 10029 20230619_1887_Aki_TMTPro18x_K_F7 87.026 62.734 47700 51940 63896 53785 79163 55467 66729 61190 52813 57005 64592 35618 45666 27900 77152 32108 29578 24069 44322 47532 63687 54252 80339 56209 67600 62006 55086 57149 64764 36935 48556 29317 75025 31903 28722 22967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36691000 12563 3440 11879 24077 19349 19349 1 9606 Homo sapiens 0.03630954620871307 IAVEPVNPSELPK Unmodified 1391.766 0.76603089 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 5.5 0.5 1 1 56.448 56.516 3 5.2956E-05 16651 20230619_1886_Aki_TMTPro18x_K_F6 111.39 95.251 153230 130120 144990 142970 141950 189300 147450 147290 188760 171100 158410 142830 178080 154010 156330 184660 155530 180750 141660 119240 147940 143960 148190 186900 149650 153970 188780 170910 164700 146740 180110 160150 159480 184770 149000 171620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 469820000 12564 2436 11880 24078;24079 19350 19350 1 9606 Homo sapiens 0.08581851629060111 IAVGSDADLVIWDPDSVK Unmodified 1898.9626 0.96255845 1284 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q8NAN9 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 0 0 0 5 0.816 1 1 1 63.714 63.747 3 2.1845E-06 19920 20230619_1883_Aki_TMTPro18x_K_F4 98.507 84.791 96384 81013 86685 94066 108150 113020 113510 110150 157640 83884 80735 78182 87122 66560 86407 90639 88802 98556 89064 74276 89235 94188 110830 112810 115410 112020 154810 86161 86722 79288 88673 70376 88036 91118 85010 93489 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 835970000 12565 1284 11881 24080;24081;24082 19351;19352;19353 19351 3 9606 Homo sapiens 0.049035669414479344 IAVHCTVR Unmodified 954.50692 0.50691985 3733 Q5VVC8;Q08ES8;Q5VVD0;P62913-2;P62913 RPL11 60S ribosomal protein L11 yes no 0 0 0 2.67 1.7 1 1 1 32.333 32.379 3 0.00062584 6943 20230619_1880_Aki_TMTPro18x_K_F1 130.27 77.101 162700 121730 159460 172880 194730 230560 192430 194160 204690 111850 126670 126360 114330 97245 128820 111800 157570 125330 150340 111900 162900 171050 199530 227800 194490 198660 204420 118060 133150 126700 117850 102050 132210 112930 150260 119010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 124330000 12566 3733 11882 24083;24084;24085 19354;19355 19354 2 9606 Homo sapiens 0.027846669767768617 IAVHPDYQGMGYGSR Oxidation (M) 1665.7569 0.75693954 4491 Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 yes no 0 1 0 7 0.816 1 1 1 40.172 40.22 3 1.7728E-05 9353 20230619_1887_Aki_TMTPro18x_K_F7 102.65 95.241 90922 76629 82353 93412 102660 111180 101360 100720 125220 120610 119570 112380 109500 91534 100980 113180 112910 108850 84023 70289 84743 93177 105030 110850 102990 104140 126000 120590 122440 113740 111670 96264 103560 113120 107890 103450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 251840000 12567 4491 11883 24086;24087;24088 19356;19357 19357 2792 2 9606 Homo sapiens -0.04930864998959805 IAVHPDYQGMGYGSR Unmodified 1649.762 0.76202492 4491 Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 yes no 0 0 0 7.5 0.5 1 1 44.441 44.491 3 2.9979000000000004E-25 11266 20230619_1888_Aki_TMTPro18x_K_F8 196.18 164.79 42537 33078 37464 36268 42113 43784 41470 39503 45075 49182 49981 40441 52548 43205 44591 54643 53800 41995 39282 30320 38536 36481 43350 43627 41970 40903 45945 48927 51092 41594 53167 45077 46043 53997 51305 40064 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160350000 12568 4491 11883 24089;24090 19358 19358 1 9606 Homo sapiens -0.03686561136328237 IAVMELFRPK Unmodified 1202.6845 0.68454987 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5;F5GWI0;Q16531-2;F5H2L3;A0A7P0Z4L2;F5GZY8;F5H198;A0A7P0TAX4 DDB1 DNA damage-binding protein 1 yes no 0 0 1 5.5 0.5 1 1 61.115 61.168 3 5.5133E-06 18603 20230619_1886_Aki_TMTPro18x_K_F6 163.38 130.44 365060 297740 359570 343440 313740 333530 350670 362530 367990 446450 415690 381130 438300 380040 396020 475990 448670 463080 337510 273000 364880 343160 330380 338830 352220 370530 376270 444550 425030 390000 444680 397180 406800 475820 428880 439920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1193000000 12569 1710 11884 24091;24092 19359 19359 1 9606 Homo sapiens 0.09131497456087345 IAVSIEDEANK Unmodified 1187.6034 0.60338224 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;Q9NZB2-5;A0A0C4DG79;A0A0C4DH52 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 0 0 3 0 1 52.252 52.317 3 0.026642 15174 20230619_1882_Aki_TMTPro18x_K_F3 59.04 41.673 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12570 1839 11885 24093 19360 19360 1 9606 Homo sapiens 0.01708468227047888 IAVTGTGAHPAFK Unmodified 1268.6877 0.68772099 4396 Q96SL4 GPX7 Glutathione peroxidase 7 yes yes 0 0 0 3 0 1 45 45.073 3 6.2473E-11 11855 20230619_1882_Aki_TMTPro18x_K_F3 177.16 133.65 199330 150600 167080 186670 205410 237780 237140 212060 254330 258140 258380 299120 284530 245530 252500 294040 322310 335570 183980 138220 173160 186190 211320 235950 237680 219700 258380 259670 266340 299840 288150 257630 261400 296890 307800 318240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155020000 12571 4396 11886 24094 19361 19361 1 9606 Homo sapiens 0.06412463834453774 IAVVGEGR Unmodified 799.4552 0.45520186 4000 Q59ER5;Q53H17;Q53GN4;A0A8V8TNU2;A0A8V8TNT7;O75083;A0A8V8TP22;A0A8V8TQ74;A0A8V8TQK0;V9HWG7;A0A8V8TP31;D6RD66;B3KXN4 WDR1;HEL-S-52 WD repeat-containing protein 1 yes no 0 0 0 4.5 0.5 1 1 40.748 40.813 2 0.024256 9847 20230619_1885_Aki_TMTPro18x_K_F5 85.212 20.435 239770 188470 213140 246350 330250 370980 285260 290670 397090 305170 316850 276420 323160 265880 289800 303460 319600 294360 221450 173050 220720 245510 332890 363760 293540 302730 394830 307090 328810 281710 328020 276670 296990 303830 305330 279770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308940000 12572 4000 11887 24095;24096 19362 19362 1 9606 Homo sapiens 0.04745246554534788 IAVYSCPFDGMITETK Oxidation (M) 1846.8481 0.84812231 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 1 0 7 0.816 2 2 2 59.709 59.759 3;4 3.9526E-08 18007 20230619_1886_Aki_TMTPro18x_K_F6 122.93 111.41 118290 95892 115230 113700 118980 131180 120910 120770 128520 132870 133080 119120 133540 115680 128580 151400 133620 144080 109350 87948 117350 113620 123340 131100 122080 124410 130740 133220 136270 121530 136060 121330 131250 151090 127870 136880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 575400000 12573 3621 11888 24097;24098;24099;24100;24101;24102 19363;19364;19365;19366 19363 2302 4 9606 Homo sapiens -0.041427821365232376 IAVYSCPFDGMITETK Unmodified 1830.8532 0.85320769 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 8 0 1 62.6 62.625 3 0.00061969 18929 20230619_1888_Aki_TMTPro18x_K_F8 73.834 63.495 37798 34955 41641 36708 33733 47614 41013 40471 50509 45777 50374 44661 46008 40946 51775 47505 42939 53223 35009 32008 41844 37095 35945 47144 41240 41973 50885 45966 51474 45286 47367 42712 52041 47967 41240 50453 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67898000 12574 3621 11888 24103 19367 19367 1 9606 Homo sapiens -0.028984782738916692 IAWALNK Unmodified 814.47012 0.47012364 960;3342 Q0P607;O95104-2;O95104-3;O95104;B7Z876;B7Z3A4;A0A0A0MT33;Q9UPN6;Q9UPN6-2 SFRS15;SCAF4;SCAF8 Splicing factor, arginine/serine-rich 15;Protein SCAF8 no no 0 0 0 4 0 1 57.323 57.328 2 0.025253 17225 20230619_1883_Aki_TMTPro18x_K_F4 103.71 58.4 89101 88453 82744 74239 110990 180240 102570 90018 173980 44325 37381 47933 47994 40499 56282 50634 47656 48829 82450 80839 85035 77536 113460 172040 105940 96946 167350 47734 45328 48256 49105 42553 56578 50640 45689 46393 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31523000 12575 3342;960 11889 24104 19368 19368 1 9606 Homo sapiens 0.055467384225039496 IAWECPEK Unmodified 1031.4746 0.47461667 4481 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 5 0 1 51.367 51.442 2 0.0013204 14370 20230619_1885_Aki_TMTPro18x_K_F5 118.74 76.144 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12576 4481 11890 24105 19369 19369 1 9606 Homo sapiens -0.039861652169065565 IAWPPPTELGSSGSALEEGIK Unmodified 2138.0895 0.089549874 3999 Q53GG0;Q9UHB6;F8VQE1;B4DN52;Q9UHB6-2;Q9UHB6-4;F8VS07;B3KTW2;Q9UHB6-3;Q9UHB6-5 LIMA1 LIM domain and actin-binding protein 1 yes no 0 0 0 7 0 1 62.717 62.752 3 3.3141E-05 19075 20230619_1887_Aki_TMTPro18x_K_F7 88.176 80.372 95503 64649 87986 89207 63162 98767 83900 87866 97841 114920 100370 115240 138250 114800 85153 167980 133420 181660 88156 59431 89666 88180 68395 98805 83882 91231 99123 114700 104560 117010 137410 121300 90665 168420 127520 172220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183760000 12577 3999 11891 24106 19370 19370 1 9606 Homo sapiens 0.06602868095797021 IAYFTLPK Unmodified 951.54295 0.54295423 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A8A5YP40;A0A994J773;A0A8A5YP91 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 4.5 0.5 1 1 61.625 61.651 2 0.01512 18650 20230619_1885_Aki_TMTPro18x_K_F5 102.71 53.355 67264 57484 65301 73536 66823 88767 83300 76976 103690 72142 74322 75400 90539 67900 79592 93624 87924 99308 62199 52751 66603 73121 69878 88284 83614 79344 103210 73349 78354 76197 91332 71705 81667 93934 84123 94222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76008000 12578 462 11892 24107;24108 19371 19371 1 9606 Homo sapiens 0.06524447425272228 IAYPPGVK Unmodified 843.48544 0.48543935 3001 G1UI16;Q29RF7;Q29RF7-3 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 0 2 0 1 49.07 49.135 2 0.014222 14034 20230619_1881_Aki_TMTPro18x_K_F2 99.384 58.157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12579 3001 11893 24109 19372 19372 1 9606 Homo sapiens 0.05743605219709025 IAYQLAVEAESEQK Unmodified 1577.7937 0.7937022 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258 COPB2 Coatomer subunit beta' yes no 0 0 0 4.5 1.12 1 1 1 1 60.784 60.819 3 0.020134 18803 20230619_1882_Aki_TMTPro18x_K_F3 57.414 39.001 32944 29622 31014 35357 27320 29292 33248 33718 37652 43620 46365 33700 41294 33075 38180 43049 34093 36086 30467 27159 31635 35164 28829 30194 33333 34407 38469 43238 46848 34686 42128 34676 38683 42699 32673 34341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 397720000 12580 3031 11894 24110;24111;24112;24113 19373 19373 1 9606 Homo sapiens 0.027917100986087462 ICALDDNVCMAFAGLTADAR Unmodified 2182.9809 0.98094418 1051 Q05DH1;A0A0K0K1K4;O14818;H0UI83;O14818-4 PSMA7;hCG_41772 Proteasome subunit alpha type;Proteasome subunit alpha type-7 yes no 0 0 0 6.5 0.5 1 1 64.204 64.242 3 7.6459E-17 19761 20230619_1887_Aki_TMTPro18x_K_F7 167.05 151.96 29581 24515 27788 30655 25209 33191 24739 26765 74889 30251 27896 35893 44006 31098 28040 42807 36746 44404 27341 22494 28356 30479 26536 33211 26481 27887 71447 30677 31551 36013 43632 32885 29357 42868 35127 42130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215760000 12581 1051 11895 24114;24115 19374 19374 1 9606 Homo sapiens -0.06322705742149992 ICANDAIPK Unmodified 1000.5012 0.50116577 3034 H0Y9X1;Q96EY4 TMA16 Translation machinery-associated protein 16 yes no 0 0 0 6 0.816 1 1 1 47.066 47.148 3 0.014334 12667 20230619_1886_Aki_TMTPro18x_K_F6 61.398 32.999 92749 79180 81271 67365 69684 74265 88227 75327 99044 87837 89599 72904 107190 77484 90593 101880 102390 78887 85698 72408 83253 69216 73808 74685 88201 77234 99891 87692 93027 74943 107970 81110 93115 100680 97688 75257 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137840000 12582 3034 11896 24116;24117;24118 19375 19375 1 9606 Homo sapiens 0.000935236744339818 ICANHYISPDMK Oxidation (M) 1463.6537 0.65372002 3613 P49792;Q13073 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 1 0 8 0 1 42.874 42.877 3 0.00063713 10642 20230619_1888_Aki_TMTPro18x_K_F8 98.156 80.491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12583 3613 11897 24119 19376 19376 2294 1 9606 Homo sapiens -0.05956068711157059 ICANHYITPMMELKPNAGSDR Oxidation (M) 2433.1239 0.12392002 1241 A0A140VK94;F6WQW2;P43487-2;P43487;C9JXG8;D3DX26;C9JGV6;C9JJ34;B7Z6U1;B4DE76 RANBP1 Ran-specific GTPase-activating protein yes no 0 1 1 1.5 0.5 1 1 49.035 49.068 4 1.1238E-07 14025 20230619_1881_Aki_TMTPro18x_K_F2 114.37 105.44 132040 122850 133980 134560 107470 114510 120210 124870 119040 163740 164320 160510 147060 131350 141260 195740 164160 152820 122210 112540 135520 134750 114010 117630 120570 127910 123310 163180 165690 162170 150410 139750 145320 193100 156770 145640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1469899999.9999998 12584 1241 11898 24120;24121 19377 19377 781;782 1 9606 Homo sapiens -0.03531698350889201 ICANHYITPMMELKPNAGSDR Unmodified 2417.129 0.1290054 1241 A0A140VK94;F6WQW2;P43487-2;P43487;C9JXG8;D3DX26;C9JGV6;C9JJ34;B7Z6U1;B4DE76 RANBP1 Ran-specific GTPase-activating protein yes no 0 0 1 2.5 0.5 1 1 52.582 52.628 4 1.3937E-22 15547 20230619_1881_Aki_TMTPro18x_K_F2 186.01 172.33 240460 178430 224330 187980 149230 179220 187220 192350 186050 310790 267060 232220 288190 223150 245280 308310 267480 251710 222090 163530 227850 189160 162100 182290 186790 198680 193420 305120 270860 239070 291230 235090 251750 305110 255600 239730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3441099999.9999995 12585 1241 11898 24122;24123 19378;19379 19378 2 9606 Homo sapiens -0.022873944883031072 ICANHYITPMMELKPNAGSDR 2 Oxidation (M) 2449.1188 0.11883464 1241 A0A140VK94;F6WQW2;P43487-2;P43487;C9JXG8;D3DX26;C9JGV6;C9JJ34;B7Z6U1;B4DE76 RANBP1 Ran-specific GTPase-activating protein yes no 0 2 1 8 0 1 44.263 44.281 4 7.0307E-06 11173 20230619_1888_Aki_TMTPro18x_K_F8 94.632 82.151 40933 35586 26962 34223 36373 32261 37192 29823 34967 41341 49186 38492 41956 33419 40893 45627 42514 42964 37758 32570 28727 34662 37020 32768 37371 30973 36328 41067 49409 39080 42975 35296 41719 45491 40665 40834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97785000 12586 1241 11898 24124 19380 19380 781;782 1 9606 Homo sapiens -0.04776002213520769 ICAVGITK Unmodified 860.47897 0.47897377 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DS32 CSE1L Exportin-2 yes no 0 0 0 2 0 1 49.498 49.557 2 0.010526 14235 20230619_1881_Aki_TMTPro18x_K_F2 98.523 41.42 203030 143070 181030 204090 224920 244740 202390 210370 280570 236630 204440 244290 310200 226430 171030 377080 352300 326910 187410 131550 186500 201520 229730 243560 207750 217960 278510 238120 218050 247230 306640 242220 187490 373010 335150 311120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188150000 12587 1462 11899 24125 19381 19381 1 9606 Homo sapiens 0.04315343996677257 ICCDLDVLASK Unmodified 1292.6105 0.61045823 1282 P05166-2;B7Z8A8;A0A1B2JLU8;C9JQS9;Q59GV0;E9PDR0;E7ETT1;E7EUY3;E7ETT4;E7EX59;P05166;E9PEC3;Q8WVH4 PCCB Propionyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 6 0 1 60.581 60.639 3 0.00024763 18390 20230619_1886_Aki_TMTPro18x_K_F6 91.937 70.984 36613 32417 41569 36138 36697 41587 38982 36981 46240 38449 38469 40746 42401 32936 43698 43352 39884 45096 33911 29704 41707 36285 38568 41543 39408 38146 46374 38866 40034 40996 43188 34800 44202 43496 38233 42795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32582000 12588 1282 11900 24126 19382 19382 1 9606 Homo sapiens -0.024142584884202734 ICDDELILIK Unmodified 1230.653 0.65297497 3470 P17987;E7ERF2;E7EQR6;F5H282;F5GZ03 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 4 0.816 1 1 1 62.199 62.226 3 0.00043957 19259 20230619_1883_Aki_TMTPro18x_K_F4 105.4 56.757 310480 255080 318430 373460 331490 388290 346870 356010 292430 619360 809250 1283000 688170 791120 947310 759740 889530 1209600 287160 234460 323360 367400 343650 390660 347710 373360 322420 630950 804460 1253500 719610 829740 954610 789750 853870 1142900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1346800000 12589 3470 11901 24127;24128;24129 19383;19384 19384 2 9606 Homo sapiens 0.04687459911474434 ICDECNYGSYQGR Unmodified 1620.6297 0.62969012 163 A0A024R1U2;Q7RTV0 PHF5A PHD finger-like domain-containing protein 5A yes no 0 0 0 3.5 0.5 1 1 42.215 42.268 2 9.0726E-36 10566 20230619_1882_Aki_TMTPro18x_K_F3 277.96 259.65 107150 77960 90782 104790 115450 121290 115220 108240 139770 166660 177960 180060 191340 153080 141770 196440 202590 189320 98886 71625 94033 103800 117990 121110 116940 113050 142660 165680 181310 181280 192470 161110 148680 196150 193160 179940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 307880000 12590 163 11902 24130;24131 19385;19386 19385 2 9606 Homo sapiens -0.15579953935434787 ICDEITGR Unmodified 962.44913 0.4491302 4227 Q8N335;C9K0P5;C9JFA7 GPD1L Glycerol-3-phosphate dehydrogenase 1-like protein yes no 0 0 0 3 0 2 43.39 43.46 2 0.00037197 11131 20230619_1882_Aki_TMTPro18x_K_F3 129.56 88.577 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12591 4227 11903 24132;24133 19387;19388 19388 2 9606 Homo sapiens -0.0335963973931257 ICDGVQFGAGIR Unmodified 1291.6343 0.63430521 4742 Q9Y512;B4DN54;B3KUE6 SAMM50 Sorting and assembly machinery component 50 homolog yes no 0 0 0 7.5 0.5 1 1 52.091 52.167 2 7.4264E-07 14542 20230619_1887_Aki_TMTPro18x_K_F7 203.55 177.98 171500 136350 154610 168030 172490 218710 197440 173550 208730 190740 193210 181160 220760 180520 192520 209100 211390 210650 158420 125110 158870 167710 178670 216200 197900 180920 211390 191670 200100 184400 223060 187810 197390 209720 202070 200060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 225360000 12592 4742 11904 24134;24135 19389;19390 19389 2 9606 Homo sapiens 0.00015343060272243747 ICDIAINWAGGLHHAK Unmodified 1774.8937 0.8937078 3243 O15379;O15379-2 HDAC3 Histone deacetylase 3 yes no 0 0 0 3 0 1 55.483 55.524 4 7.2737E-08 16559 20230619_1882_Aki_TMTPro18x_K_F3 124.09 98.229 117450 91882 100580 117050 98898 111400 124190 118010 137000 137280 119840 124610 148670 126080 125100 141570 134020 138280 108450 84341 103660 116060 103600 113230 124120 120640 138240 137330 125060 127100 149700 130840 128210 141800 128170 131360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 101350000 12593 3243 11905 24136 19391;19392 19391 2 9606 Homo sapiens 0.03725668951392436 ICDPYAWLEDPDSEQTK Unmodified 2065.8939 0.89388653 3598 P48147;Q9UM02;B2RAH7 PREP Prolyl endopeptidase yes no 0 0 0 4.5 0.5 1 1 62.893 62.919 3 1.1487E-09 19255 20230619_1885_Aki_TMTPro18x_K_F5 139.6 129.82 49143 43156 57655 53328 48916 58507 57454 58328 62327 64010 66591 65545 68559 60617 62919 62016 69860 75530 45527 39585 57709 53107 51740 58756 57619 59748 63402 64429 68204 66293 69657 62781 64458 63061 66814 71574 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 83932000 12594 3598 11906 24137;24138 19393 19393 1 9606 Homo sapiens -0.09642465420574808 ICDQWDNLGALTQK Unmodified 1660.7879 0.78790532 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;B4DFY0;B3KUX9;B7Z2W3;H7C5W8 ACTN1 Alpha-actinin-1 yes no 0 0 0 7.5 0.5 1 1 61.873 61.906 3 1.1507E-05 18650 20230619_1887_Aki_TMTPro18x_K_F7 116.79 97.109 227310 204500 224560 196720 174890 217190 243440 258510 234180 415210 297830 294140 428320 312230 258910 444080 355540 406800 210290 187140 227480 199870 187530 219120 241370 265180 242680 407190 308100 304710 424640 328790 272630 441440 339600 386590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1428600000 12595 387 11907 24139;24140 19394 19394 1 9606 Homo sapiens -0.01605711684715061 ICELLFS Unmodified 880.43644 0.43644025 1098 O15305;A0A291FGD1;A0A0S2Z4J6;B2R6D4;H3BRM0;H3BV55;Q59F02;B7Z419;B7Z6A1;B7Z922 PMM2 Phosphomannomutase 2;Phosphomannomutase yes no 0 0 0 6 0 1 65.697 65.74 2 0.051871 20632 20230619_1886_Aki_TMTPro18x_K_F6 77.906 41.721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12596 1098 11908 24141 19395 19395 1 9606 Homo sapiens -0.008560511315408803 ICEPGYSPTYK Unmodified 1313.5962 0.59618837 226 P07858;E9PHZ5;A0A024R374;A8K2H4;B4DL49;A0A7P0NGZ6;A0A7I2YQK9;A0A7I2V668;E9PQM1;A0A7I2V440;E9PR21;B4DMY4;B3KUJ8;Q6LAF9 CTSB Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes no 0 0 0 7 0.816 1 1 1 48.407 48.485 2 1.0091E-16 12872 20230619_1887_Aki_TMTPro18x_K_F7 229.17 184.72 252450 203940 246260 234630 271880 355200 413670 392790 515160 427370 452660 551040 512320 437670 439870 592720 541430 596200 233370 187000 251230 236170 284700 350710 411670 399450 516220 433920 470600 549880 517720 463280 455040 592830 517430 566040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 480000000 12597 226 11909 24142;24143;24144 19396;19397;19398 19397 3 9606 Homo sapiens -0.048065876450209544 ICEQFEAETPTDSETTQK Unmodified 2112.9157 0.91574419 1090 Q5QNY5;A0A0S2Z497;P40855;B7Z6I5;H0YJ60;H0YDY4;B7Z2P6 PEX19 Peroxisomal biogenesis factor 19 yes no 0 0 0 1 0 1 51.128 51.128 3 7.3093E-08 14811 20230619_1880_Aki_TMTPro18x_K_F1 130.4 118.75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12598 1090 11910 24145 19399 19399 1 9606 Homo sapiens -0.09619705462637285 ICFQGDEGACPTR Unmodified 1509.634 0.63404721 4595 Q9NUD5 ZCCHC3 Zinc finger CCHC domain-containing protein 3 yes yes 0 0 0 4 0 1 45.386 45.43 2 8.4538E-08 11910 20230619_1883_Aki_TMTPro18x_K_F4 164.04 140.67 28349 28873 28808 29928 26542 29556 30930 27308 21501 37052 38530 33381 39294 30292 53738 36035 37202 38874 26257 26428 29199 30148 27838 29883 30661 28328 23177 36780 38772 33960 40715 31679 53380 36336 35766 36887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16749000 12599 4595 11911 24146 19400 19400 1 9606 Homo sapiens -0.10038444721863016 ICGDIHGQYTDLLR Unmodified 1659.8039 0.80388973 3705 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;B4DJ75;B7ZB67;H0Y3Y6;C9JP48;B4E163;C9J9S3 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes no 0 0 0 6.5 0.5 1 1 51.819 51.894 3 6.6927E-23 14405 20230619_1887_Aki_TMTPro18x_K_F7 239.75 171.21 1104100 892730 1047000 1159200 1040600 1313700 1235300 1149200 1372000 1193900 1242000 1051700 1285900 1162000 1170900 1405100 1322400 1473800 1020400 819530 1069200 1150500 1088100 1312400 1238300 1186900 1384300 1200700 1281000 1079200 1306200 1207900 1202400 1411200 1264800 1398500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2215000000 12600 3705 11912 24147;24148 19401;19402 19402 2 9606 Homo sapiens 0.00037994552189957176 ICGDIHGQYYDLLR Unmodified 1721.8195 0.8195398 3704;685 P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;E9PMD7;B3KXM2;A0A024RBP2;F8W0W8;P36873;P36873-2;Q9UPN1;F8VYE8;F8VR82;A0A087WYY5 PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 7.5 0.5 1 1 54.135 54.204 3 1.4429E-22 15397 20230619_1887_Aki_TMTPro18x_K_F7 236.05 208.19 428570 350940 373370 445780 441900 517660 481830 475630 536710 451300 413710 393230 445930 392170 468660 479950 450830 418450 395870 322070 385420 443200 455050 516920 485040 488140 538700 455870 431700 402000 455310 409130 475240 477480 431300 398220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 572480000 12601 3704;685 11913 24149;24150 19403 19403 1 9606 Homo sapiens -0.012497189307396184 ICGLEEDLK Unmodified 1075.522 0.52196079 1340 A0A2P9DU05;A0A8V8TL82;O75116;E9PF63;A0A8V8TL90 ROCK2 Rho-associated protein kinase 2 yes no 0 0 0 3 0 1 55.986 56.023 2 0.00031994 16784 20230619_1882_Aki_TMTPro18x_K_F3 111.95 60.981 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12602 1340 11914 24151 19404 19404 1 9606 Homo sapiens -0.012779307365462955 ICGVEDAVSEMTR Unmodified 1465.6541 0.65411395 766 C9JBI3;Q53EY1;A0A024RDL3;A0A024RDL9;P78330 PSPH Phosphoserine phosphatase yes no 0 0 0 4 0 1 59.786 59.788 3 0.00087904 18235 20230619_1883_Aki_TMTPro18x_K_F4 73.887 66.478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12603 766 11915 24152 19405 19405 1 9606 Homo sapiens -0.06008693781927832 ICHTLTEK Unmodified 1000.5012 0.50116577 2264 C9J3Y0;J3QS57;J9JIC8;C9J6Q8;B2R8Z5;Q9Y2Y6 TMEM98 Transmembrane protein 98 yes no 0 0 0 7 0 1 39.389 39.452 3 0.0014139 9036 20230619_1887_Aki_TMTPro18x_K_F7 103.83 84.479 26368 15800 22970 22348 29544 33426 24053 28770 40939 28597 29702 31904 33910 28500 26833 32797 35641 29396 24315 14538 23708 22170 30072 32840 25094 29683 40277 29044 31188 32122 34151 29731 27926 32686 33972 27980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20891000 12604 2264 11916 24153 19406 19406 1 9606 Homo sapiens 0.0009352367444535048 ICLDQQNPLYK Unmodified 1390.6915 0.69148574 2777 CON__P02777 yes yes 0 0 0 5.33 3.09 1 1 1 55.905 55.946 2;3 0.00011667 16803 20230619_1880_Aki_TMTPro18x_K_F1 156.92 103.45 + 362630 277690 349690 253690 257490 421690 293270 282700 449570 319510 388070 445300 373990 370060 368290 323340 361440 425770 335080 254170 354450 260690 277170 410300 298580 299370 446110 325220 400790 443450 382210 381550 373990 331620 346330 403080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1334400000 12605 2777 11917 24154;24155;24156 19407;19408 19407 2 0.011767655460062088 ICLDVLK Unmodified 859.48372 0.48372479 562 A0A8V8TNE2;A0A024R9A9;Q9NPD8;A0A8V8TN93;A0A8V8TQ15 UBE2T Ubiquitin-conjugating enzyme E2 T yes no 0 0 0 1 0 1 59.356 59.356 2 0.014418 18230 20230619_1880_Aki_TMTPro18x_K_F1 105.12 23.482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12606 562 11918 24157 19409 19409 1 9606 Homo sapiens 0.04836228139447485 ICLTDHFK Unmodified 1032.5063 0.50625115 4723 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 yes yes 0 0 0 5.33 3.09 1 1 1 48.398 48.449 3 0.00033222 12920 20230619_1888_Aki_TMTPro18x_K_F8 147.29 110.11 428480 341850 361610 397090 402520 495680 439280 422280 572160 317600 278970 290970 331040 272700 315730 392300 360740 333450 395630 313490 373800 397760 416650 491950 444590 433710 563000 326380 302430 296230 335650 288210 324220 388770 344530 317440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 481670000 12607 4723 11919 24158;24159;24160 19410;19411 19411 2 9606 Homo sapiens -0.008701724629418095 ICNAVSPDK Unmodified 1002.4804 0.48043033 1651 A0A7I2V2U6;B2R7W0;P13995;P13995-2;B8ZZU9;A0A7I2YQD4;A0A7I2V482 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes no 0 0 0 6 0 1 43.309 43.402 2 3.1571E-05 10955 20230619_1886_Aki_TMTPro18x_K_F6 131.5 98.663 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12608 1651 11920 24161 19412 19412 1 9606 Homo sapiens -0.020710667052185272 ICNQVLVCER Unmodified 1289.622 0.62202597 1360 Q9P2R7;Q9P2R7-2;A0A2R8Y6Y7;Q6N0B1;E5KS55;E5KS60;A0A2R8YDQ9;B4DRV2;B7ZAF6;Q7Z503;B4DY87;Q5T9Q5;A0A2R8Y6E6;A0A2R8Y5P6;A0A0U1RQF8 SUCLA2;DKFZp686D0880 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 6.5 0.5 1 1 45.719 45.806 2 4.3094E-05 11647 20230619_1887_Aki_TMTPro18x_K_F7 148.5 100.26 123500 106780 115370 112890 127260 147070 158590 142590 176950 120590 111680 94484 122850 94393 109460 140170 132710 108450 114180 97809 118080 114030 132150 146030 158530 145380 176460 122380 118040 97256 124390 99818 112980 138260 126580 103430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75684000 12609 1360 11921 24162;24163 19413;19414 19414 2 9606 Homo sapiens -0.01120016674371982 ICPQPEEHR Unmodified 1164.5346 0.53459117 2768 CON__ENSEMBL:ENSBTAP00000024146 yes yes 0 0 0 2.5 0.5 1 1 30.953 31.018 3 3.2265E-06 6100 20230619_1881_Aki_TMTPro18x_K_F2 152.34 127.57 + 6807.5 8767.1 14413 12530 37367 48088 22622 20174 37783 12093 17271 25989 11627 11527 20100 9342.5 22107 25240 6375.5 8045.4 14355 12776 36667 45253 24092 22307 36737 13150 18507 25219 12475 12258 20340 10344 21155 23793 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64645000 12610 2768 11922 24164;24165 19415;19416 19415 2 9606 Homo sapiens -0.0410947455366113 ICPVEFNPNFVAR Unmodified 1561.7711 0.77113304 321 A0A024R565;Q9UI30-2;Q9UI30 HSPC152;TRMT112 Multifunctional methyltransferase subunit TRM112-like protein yes no 0 0 0 1.5 0.5 2 2 59.817 59.823 2;3 2.421E-07 18413 20230619_1880_Aki_TMTPro18x_K_F1 145.09 118.41 120360 109400 126540 128230 118190 132520 124840 126290 128740 146050 133310 131050 147450 129180 124350 157990 140220 151750 111420 100280 127900 128040 123590 133570 125680 129980 131260 146070 137160 133680 148970 134830 127920 157860 134090 144150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 751160000 12611 321 11923 24166;24167;24168;24169 19417;19418 19417 2 9606 Homo sapiens 0.012718322200043986 ICPVETLVEEAIQCAEK Unmodified 1987.9595 0.95946368 1410 A0A384MDW7;P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes no 0 0 0 5.33 0.471 2 1 66.658 66.701 3;4 1.5234E-18 21029 20230619_1886_Aki_TMTPro18x_K_F6 182.1 171.84 18711 14282 15981 18322 21376 21784 28229 24249 21414 21604 26952 27042 26916 21562 22753 25946 29638 25641 17274 13112 16564 18217 21927 21823 27838 24540 22413 22129 27394 27030 27268 22655 23606 25978 28263 24372 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77465000 12612 1410 11924 24170;24171;24172 19419;19420 19420 2 9606 Homo sapiens 0.005002325008263142 ICQEVLPK Unmodified 985.52665 0.52665224 3296 O75323 GBAS Protein NipSnap homolog 2 yes yes 0 0 0 7 0 1 49.708 49.792 3 0.047636 13482 20230619_1887_Aki_TMTPro18x_K_F7 58.676 36.202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12613 3296 11925 24173 19421 19421 1 9606 Homo sapiens 0.033309981968841385 ICSEEER Unmodified 921.3862 0.38619559 2760 C9JRZ6;A4D1N4;Q9NX63;F8WAR4;A0A286YEX5 CHCHD3 MICOS complex subunit MIC19 yes no 0 0 0 1 0 1 32.021 32.021 2 0.0020715 6792 20230619_1880_Aki_TMTPro18x_K_F1 164.24 23.255 23241 8592.9 34006 36395 61986 51783 41880 52136 31868 18988 44076 45212 27324 32321 40901 10500 47357 38367 21499 8112.2 34063 34610 61439 51172 43122 52323 33450 21752 43952 44257 29124 32591 41531 12569 45186 36178 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15384000 12614 2760 11926 24174 19422 19422 1 9606 Homo sapiens -0.07764205527348622 ICSHSAPEQQAR Unmodified 1382.6361 0.63609612 2364 B3KNS8;O75683 SURF6 Surfeit locus protein 6 yes no 0 0 0 4.5 0.5 1 1 25.68 25.749 3 4.1193E-18 3844 20230619_1883_Aki_TMTPro18x_K_F4 197.3 163.34 12054 5838.7 12386 12697 19770 19493 14567 20200 16323 14364 12841 15620 21747 13053 13702 10648 25073 26539 11120 5411.7 12663 12337 19794 19200 15055 20405 16411 14862 13741 15695 21506 13477 14682 11631 23890 25033 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42276000 12615 2364 11927 24175;24176 19423;19424 19423 2 9606 Homo sapiens -0.03991647921748154 ICSIYTQSGENSLVQEGSEASPIGK Unmodified 2653.2541 0.25412537 1662 B3KNR6;A0A7I2V4E5;Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2;A0A7I2V3Q3 LAS1L Ribosomal biogenesis protein LAS1L yes no 0 0 0 6 0 1 60.217 60.274 3 1.6433999999999999E-44 18228 20230619_1886_Aki_TMTPro18x_K_F6 227.6 219.25 16719 17293 18768 21481 20080 18238 19269 20414 21920 25555 20079 20493 23904 15713 20892 25650 22434 23672 15501 15854 18924 21308 20696 18753 19566 20842 22146 25383 20858 20869 24103 16916 21409 25488 21458 22500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82345000 12616 1662 11928 24177 19425 19425 1 9606 Homo sapiens -0.006371523371853982 ICSKPVVLPK Unmodified 1139.6737 0.67365083 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 4.5 0.5 1 1 48.937 49.014 3 0.001795 13318 20230619_1885_Aki_TMTPro18x_K_F5 91.03 74.398 221270 187290 225420 230980 235250 249810 267330 230380 248140 266070 261830 219590 254760 190320 249470 228210 225760 151080 204680 171810 228840 229940 244230 250780 267060 237750 254550 265540 267460 224100 259740 199330 252320 224550 215720 144590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 411870000 12617 3758 11929 24178;24179 19426;19427 19427 2 9606 Homo sapiens 0.10940095081809886 ICSWNVDGLR Unmodified 1218.5815 0.58154136 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1;G3V3C7;A0A0C4DGK8;H7C4A8;G3V5M0;G3V359;G3V5D9 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 0 4.5 3.5 1 1 55.021 55.054 2 6.9751E-10 16419 20230619_1880_Aki_TMTPro18x_K_F1 225.66 171.51 468960 404060 451630 438020 409040 494010 461830 480890 480190 496490 455320 440750 498760 410780 477170 507580 505240 468480 433650 370190 459530 440560 429990 495030 463400 492480 487470 499180 470230 449040 506580 429920 487290 506280 482890 445520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1508099999.9999998 12618 3515 11930 24180;24181 19428;19429 19428 2 9606 Homo sapiens -0.019006150025234092 ICYQEVSQCFGVLSSR Unmodified 1931.887 0.88696744 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5 DDB1 DNA damage-binding protein 1 yes no 0 0 0 2.5 0.5 1 1 61.513 61.533 3 3.7507999999999997E-19 19274 20230619_1881_Aki_TMTPro18x_K_F2 195.6 175.48 82698 56945 59873 68838 67788 76616 71674 69257 89917 80640 68571 85849 107930 87450 77320 99203 103740 94857 76218 52272 62891 68638 69994 76719 72581 71579 89776 81094 73179 86930 107460 90789 80731 99201 98943 90175 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180360000 12619 1710 11931 24182;24183 19430 19430 1 9606 Homo sapiens -0.04170056782118081 IDAAYFETSK Unmodified 1143.5448 0.54480473 2625 B4DYP7;Q96CW5-2;Q96CW5;A0A3B3ITE3 TUBGCP3 Gamma-tubulin complex component 3 yes no 0 0 0 6 0 1 55.454 55.53 3 0.0034614 16263 20230619_1886_Aki_TMTPro18x_K_F6 73.499 54.719 31419 23303 29593 30339 29306 36780 28900 31092 42536 34821 36311 39647 43591 34029 40111 38790 34073 49471 29021 21400 30215 30140 30520 36558 29594 32252 42301 35162 37888 39829 44063 35570 40514 39503 32765 46818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20087000 12620 2625 11932 24184 19431 19431 1 9606 Homo sapiens -0.02122588347447163 IDAHLNK Unmodified 809.43955 0.43955179 1889 A1LT96;A0AVT1;B3KSS1;A0AVT1-2;H0Y8S8 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 0 6.5 0.5 1 1 39.977 40.054 3 0.012046 9278 20230619_1887_Aki_TMTPro18x_K_F7 89.046 28.286 105410 63019 129100 133560 182420 181610 151770 175240 170840 110740 154800 161880 140210 124670 151230 95348 177060 165000 97484 58315 129980 129580 184230 179730 155450 177660 172110 116990 159030 160710 144150 128320 154680 100380 169070 156030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54938000 12621 1889 11933 24185;24186 19432 19432 1 9606 Homo sapiens 0.02720960037470377 IDAMHGVVGPYVK Unmodified 1384.7173 0.71730656 1521 A0A3B3ITK7;P36871;B4DFP1;B7Z6C2;P36871-3;P36871-2 PGM1 Phosphoglucomutase-1 yes no 0 0 0 1 0 1 52.637 52.637 3 0.0003345 15455 20230619_1880_Aki_TMTPro18x_K_F1 94.191 72.634 28963 23807 31507 28964 28330 34078 31492 32232 36807 34886 35479 36393 40079 35345 34777 40010 48209 41149 26802 21839 31734 28904 29783 34023 31747 33121 37148 35170 36670 36847 40532 36738 36223 40182 45947 39098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27836000 12622 1521 11934 24187 19433 19433 1 9606 Homo sapiens 0.04033659788296973 IDASKNEEDEGHSNSSPR Unmodified 1970.8566 0.85658982 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;D6RAF8;D6RD83;A0A994J4B1 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 1 2.4 1.02 1 2 1 1 32.656 32.703 3;4 5.3859E-06 6601 20230619_1883_Aki_TMTPro18x_K_F4 98.165 86.644 21436 10350 18420 22519 31067 32733 25465 29682 29683 23693 34161 30032 28880 24591 27859 16399 32335 24125 19747 9593.7 19176 21844 31119 32229 26137 30354 30148 24465 34577 30013 29591 25119 28525 17089 30838 22862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 297740000 12623 759 11935 24188;24189;24190;24191;24192 19434;19435 19435 2 9606 Homo sapiens -0.09000420641928031 IDATSASVLASR Unmodified 1189.6303 0.63026569 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 7.25 0.829 1 1 2 48.265 48.342 2;3 2.6743E-10 12798 20230619_1887_Aki_TMTPro18x_K_F7 188.91 134.94 86699 211390 99139 97806 99733 137470 100570 110270 105530 82026 89586 80895 82519 68171 146580 90243 109170 83525 81255 192240 99705 109010 103750 135680 101560 113730 106520 84423 92446 81826 87457 71909 145540 90140 104640 79498 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 297050000 12624 909 11936 24193;24194;24195;24196 19436;19437 19436 2 9606 Homo sapiens 0.04303576838219669 IDAVNAETIR Unmodified 1100.5826 0.58258722 2339 Q96CP5;B3KM34;O75439;G3V0E4;Q9UG64;B3KQ85;B4DM90;A8K1E9 PMPCB;DKFZp586I1223 Mitochondrial-processing peptidase subunit beta yes no 0 0 0 3.5 0.5 1 1 45.714 45.773 2 0.0027659 12238 20230619_1882_Aki_TMTPro18x_K_F3 101.82 59.743 239710 188630 220640 242250 250290 259720 255840 262410 316670 311760 323670 303770 332030 283210 283560 341480 322560 316060 221450 173160 226270 240460 257790 261410 259550 269170 319500 312220 331930 308160 336320 295870 291670 340660 308210 300490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 386710000 12625 2339 11937 24197;24198 19438;19439 19438 2 9606 Homo sapiens 0.03631922638032847 IDCDNLEQYFIQQGGGPDKK Unmodified 2324.0743 0.074310515 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 1 6.5 0.5 1 1 60.768 60.818 3 1.2535E-10 18448 20230619_1886_Aki_TMTPro18x_K_F6 131.67 119.81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12626 1661 11938 24199;24200 19440;19441 19440 2 9606 Homo sapiens -0.03476366763743499 IDCFSEVPTSVFGEK Unmodified 1713.792 0.79198764 2138 A8K9K6;O00567;A0PJ92;A0A494C128;H0YDU4;H0Y653 NOP56 Nucleolar protein 56 yes no 0 0 0 6 0 1 62.542 62.593 3 2.6173E-05 19273 20230619_1886_Aki_TMTPro18x_K_F6 100.11 88.498 175830 155930 172230 228300 130540 168930 140560 192500 205140 205970 145160 211500 226610 226370 167430 239220 223030 207630 162640 143290 174950 223710 139500 175750 143330 195370 203200 207610 155730 214750 226210 233490 174740 238250 212750 197600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 494070000 12627 2138 11939 24201 19442 19442 1 9606 Homo sapiens -0.03635666981676877 IDDFPNELEK Unmodified 1218.5768 0.57683314 799 A0A087WSW7;Q6I7N8;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;F6RPV8;Q9NRZ9-4 HELLS Lymphoid-specific helicase yes no 0 0 0 3 0 1 57.391 57.424 2 0.0079795 17389 20230619_1882_Aki_TMTPro18x_K_F3 94.692 54.647 22720 18943 23109 25831 15270 19816 20715 25257 25383 28079 27728 19260 28558 23761 22164 32837 23862 23968 21014 17397 23342 25443 16657 20609 20743 25492 25698 27952 28308 20154 28811 24839 22805 32325 22815 22858 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15025000 12628 799 11940 24202 19443 19443 1 9606 Homo sapiens -0.023712206642812816 IDDIADGAVKPPPNK Unmodified 1548.8148 0.814772 4171 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;M0R0J3 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 0 0 1 6 0 1 50.573 50.65 3 3.8997E-05 14152 20230619_1886_Aki_TMTPro18x_K_F6 98 84.799 96249 71765 82031 98177 75355 104920 99360 91624 112640 120660 118410 130590 136000 110250 105520 142180 136290 140180 88841 65939 84544 97015 79660 105200 99189 95339 114280 120680 122040 131400 136780 116100 109740 142140 130130 133150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99186000 12629 4171 11941 24203 19444 19444 1 9606 Homo sapiens 0.06231720198138646 IDDIFER Unmodified 906.4447 0.44469675 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 55.383 55.414 2 0.0067807 16747 20230619_1881_Aki_TMTPro18x_K_F2 130.34 85.026 519740 424690 467970 506380 488820 570180 617680 609800 685720 625680 616450 670010 695410 561980 604210 737830 670500 725500 480190 389510 480370 505640 509900 572570 617270 620600 691900 632830 639560 674540 702790 592650 620420 737530 641270 689010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1098300000 12630 2337;3778;3779 11942 24204;24205 19445 19445 1 9606 Homo sapiens -0.012267808905789934 IDDIRKPGESEE Unmodified 1386.6627 0.66268803 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 2 2.5 1.12 1 1 1 1 44.14 44.189 3 0.0073175 11761 20230619_1881_Aki_TMTPro18x_K_F2 75.479 41.518 729310 671690 679320 674830 842420 710370 735850 739570 835600 769790 906720 799830 873750 680750 817000 993150 1048600 796770 674520 614850 696310 682300 857740 717330 751420 754340 848340 777300 924760 807570 889940 722590 845440 981510 999290 759780 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 718500000 12631 2633 11943 24206;24207;24208;24209 19446;19447 19446 2 9606 Homo sapiens -0.015176805494320433 IDDIVSGHK Unmodified 982.50836 0.50835964 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 5.5 0.5 1 1 46.075 46.157 3 3.5519E-05 12097 20230619_1885_Aki_TMTPro18x_K_F5 147.75 100.56 895800 668960 828450 870470 951700 996520 924760 924980 1073500 991980 1046300 997430 1062900 893420 831600 1086800 1173700 1029200 827360 614310 849170 864090 977960 996550 938700 951660 1084100 999330 1074900 1009200 1073600 935220 869920 1085100 1118700 978700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1283600000 12632 2435 11944 24210;24211 19448;19449;19450 19448 3 9606 Homo sapiens 0.016405795465288975 IDDIVSGHKK Unmodified 1110.6033 0.60332266 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 1 7.67 0.471 1 2 43.437 43.47 3;4 0.019173 10902 20230619_1888_Aki_TMTPro18x_K_F8 64.39 43.553 68594 40532 60644 68771 75467 72848 70739 68200 87717 72433 72295 66587 73099 58824 66547 69961 69451 66300 63256 37381 62521 67132 77051 73237 72106 70120 87766 72836 74892 67613 74250 61542 67962 69918 66401 63022 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 250210000 12633 2435 11945 24212;24213;24214 19451;19452 19452 2 9606 Homo sapiens 0.0524451301771478 IDDMTAAPMDVR 2 Oxidation (M) 1365.5905 0.59045107 2244 Q5TEJ7;B2R7E8;P15927;P15927-2;P15927-3 RPA2 Replication protein A 32 kDa subunit yes no 0 2 0 2 0 1 39.923 39.993 2 0.0073424 9799 20230619_1881_Aki_TMTPro18x_K_F2 65.627 58.23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12634 2244 11946 24215 19453 19453 1396;1397 1 9606 Homo sapiens -0.07772054219003621 IDDVVNTR Unmodified 930.47706 0.47705951 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 3 0.816 1 1 1 43.183 43.247 2 0.0018381 11002 20230619_1882_Aki_TMTPro18x_K_F3 136.27 93.145 765810 548810 643060 707710 850150 888810 744440 742270 981230 857440 926320 919540 962020 814740 793060 865570 1066000 949840 706640 504020 666830 703800 864200 881750 763980 771460 983920 862750 954250 926990 972940 846710 824790 873600 1016500 901690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1952899999.9999998 12635 3622 11947 24216;24217;24218 19454;19455 19455 2 9606 Homo sapiens 0.009040065124281682 IDEFEAL Unmodified 835.39635 0.39634958 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;B7Z9R6 EZR;HEL-S-105 Ezrin yes no 0 0 0 1 0 1 63.565 63.565 2 0.005278 19932 20230619_1880_Aki_TMTPro18x_K_F1 113.82 89.848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12636 3456 11948 24219 19456 19456 1 9606 Homo sapiens -0.02793274530472445 IDEFIVK Unmodified 862.48002 0.48001963 2605 H7C0E5;B4DVT8;H7BZM7;O75312 ZPR1 Zinc finger protein ZPR1 yes no 0 0 0 5.5 0.5 1 1 59.085 59.145 2 0.05224 17752 20230619_1886_Aki_TMTPro18x_K_F6 89.55 28.762 104380 77691 95634 112320 106510 120800 106950 98174 116740 117230 123960 125680 137770 105830 116440 136760 138300 136720 96396 71429 98140 110620 109830 120960 108110 102430 118700 117730 127450 126550 139090 111510 120090 136870 132100 129860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89728000 12637 2605 11949 24220;24221 19457 19457 1 9606 Homo sapiens 0.04327881637232167 IDEFLATGK Unmodified 992.51786 0.51786169 2885 E5RIJ0;H0YBJ0;I1WZN9;E7EW18;Q53EV2;P06746 POLB DNA polymerase beta yes no 0 0 0 6.5 0.5 1 1 59.641 59.695 3 0.0033877 17698 20230619_1887_Aki_TMTPro18x_K_F7 72.643 51.368 25415 15889 27119 26614 24530 27712 30653 28919 34641 32932 36498 35916 36168 31018 29414 34559 31288 37374 23479 14647 27368 26002 25849 27950 30677 29573 35127 33159 37333 36160 36600 32347 30163 34816 29960 35446 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23782000 12638 2885 11950 24222;24223 19458 19458 1 9606 Homo sapiens 0.02130347832053303 IDEHHFVAVALR Unmodified 1405.7466 0.74663285 4586 Q9NRN7;E9PLW6 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes no 0 0 0 6.5 0.5 1 1 45.709 45.796 4 4.2898E-15 12024 20230619_1886_Aki_TMTPro18x_K_F6 183.33 136.98 62583 48648 54095 60981 42558 61188 58688 56795 72775 72393 71830 80187 84245 67051 60581 103710 88121 95361 57786 44649 55543 60566 45706 61724 58681 58764 73315 72570 74312 80636 84465 71538 63782 103020 84097 90636 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 280200000 12639 4586 11951 24224;24225 19459;19460 19459 2 9606 Homo sapiens 0.05998940128802133 IDEKPETFESLVAK Unmodified 1604.8298 0.82975336 879 A0A087X0M4;A0A8Q3WKX9;Q9BWU0;A0A087WWF4;A0A8Q3WLG9;B4DV74;A0A8Q3WKX3 SLC4A1AP Kanadaptin yes no 0 0 1 6 0 1 57.283 57.354 3 4.4514E-05 17033 20230619_1886_Aki_TMTPro18x_K_F6 107.37 90.598 73736 69404 66715 80934 58032 76901 76219 88214 81193 90647 97591 70504 87084 83244 91990 107970 72083 89201 68191 63611 68330 80748 61566 78305 76006 89360 83096 90848 98731 73084 89469 86709 92461 107010 69279 84860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84084000 12640 879 11952 24226 19461 19461 1 9606 Homo sapiens 0.051531672754663305 IDELEPR Unmodified 870.4447 0.44469675 3900;2497 Q14697-2;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 1.5 0.5 1 1 45.78 45.82 2 0.043535 12623 20230619_1880_Aki_TMTPro18x_K_F1 89.142 39.118 89732 67906 84155 82201 104560 109330 106010 103420 125080 104850 130000 127700 126110 107710 112080 118400 130840 133010 82891 62309 86248 82214 107010 108380 107380 106090 126450 106620 132950 127950 128170 112340 115290 119620 125020 126170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200080000 12641 3900;2497 11953 24227;24228 19462 19462 1 9606 Homo sapiens 0.004292191094236841 IDELPEGAVKPPANK Unmodified 1576.8461 0.84607213 182 A0A024R216;Q9Y3E1 HDGFRP3 Hepatoma-derived growth factor-related protein 3 yes no 0 0 1 6 0 1 50.313 50.39 3 9.3809E-06 14016 20230619_1886_Aki_TMTPro18x_K_F6 115.83 93.023 123170 124840 117190 126020 113390 127550 122120 132990 148000 153760 156030 158240 159650 137940 144630 171700 166940 161220 114020 114240 119540 127280 118380 129060 123490 136020 149680 154390 159880 159760 162140 144710 148710 171350 159470 153260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94300000 12642 182 11954 24229 19463;19464 19464 2 9606 Homo sapiens 0.08072293232226002 IDEMPEAAVK Oxidation (M) 1117.5325 0.53252548 2314 B2RDE8;A0A384NPW1;P51858;B7Z525 HDGF Hepatoma-derived growth factor yes no 0 1 0 2.33 0.471 2 1 45.194 45.273 2;3 0.00044737 12269 20230619_1881_Aki_TMTPro18x_K_F2 120.33 94.596 216140 193390 198500 244470 279480 264600 249300 240170 300050 277510 323620 281130 308180 255720 279290 305150 303400 298780 199840 177420 204550 242870 282840 265600 254650 248100 303690 278660 329930 284570 313590 267260 285990 305440 290030 283870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 318700000 12643 2314 11955 24230;24231;24232 19465;19466 19465 1425 2 9606 Homo sapiens -0.021539480821274992 IDEMPEAAVK Unmodified 1101.5376 0.53761086 2314 B2RDE8;A0A384NPW1;P51858;B7Z525 HDGF Hepatoma-derived growth factor yes no 0 0 0 4 0.816 1 1 1 51.336 51.394 3 7.5203E-05 14744 20230619_1882_Aki_TMTPro18x_K_F3 112.11 72.959 550800 481390 557930 577700 580260 696040 648790 619230 732620 758080 727180 679120 755190 636590 664930 763890 756340 714920 509580 441440 566740 577070 603240 693010 652770 641570 741740 756400 747200 691670 765590 664860 683310 762620 722490 679710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 991370000 12644 2314 11955 24233;24234;24235 19467;19468 19467 2 9606 Homo sapiens -0.009096442194959309 IDEPLEGSEDR Unmodified 1258.5677 0.56772501 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;B3KU16;S4R359 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 1.5 0.5 1 1 43.838 43.879 2 6.3432E-17 11753 20230619_1880_Aki_TMTPro18x_K_F1 234.28 183.45 404760 296260 368340 399320 441970 530650 466660 466930 584110 518020 552630 576450 613930 499050 460630 665520 610270 593040 373750 272190 378590 396380 454510 524950 472630 482680 587050 522770 571110 580130 617350 526070 480490 661440 582340 564100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8066099999.999999 12645 1865 11956 24236;24237 19469 19469 1 9606 Homo sapiens -0.05121614020595189 IDESIHLQLR Unmodified 1222.667 0.66698555 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;B0QY90;B3KNG0;Q7Z5X3 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 0 5 0 1 49.117 49.193 3 7.0326E-17 13404 20230619_1885_Aki_TMTPro18x_K_F5 197.27 144.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12646 2176 11957 24238 19470 19470 1 9606 Homo sapiens 0.06455873454819994 IDEVAVPVHVAK Unmodified 1275.7187 0.71868677 1838 A0A8V8TNL6;A0A8V8TNX3;B7Z6H4;O14802;A0A8V8TM36;A0A8V8TM70;Q8TCW4 POLR3A DNA-directed RNA polymerase;DNA-directed RNA polymerase III subunit RPC1 yes no 0 0 0 6 0 1 50.037 50.114 3 0.057981 13992 20230619_1886_Aki_TMTPro18x_K_F6 43.501 29.733 42217 39011 38114 48217 44705 46116 44502 48246 64882 48457 46012 45233 47350 41900 45567 49307 59298 58875 39037 35777 39213 47902 45930 46853 45502 49143 64157 48898 48147 45958 48238 43740 47143 49950 56600 55820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39046000 12647 1838 11958 24239 19471 19471 1 9606 Homo sapiens 0.09185617148705205 IDFDSVSSIMASSQ Unmodified 1485.6657 0.6657245 3173 K7ERF1;Q9UBQ5;U3LUI4;A0A087WVB9;K7EK53 EIF3K Eukaryotic translation initiation factor 3 subunit K yes no 0 0 0 6.25 0.829 1 1 2 65.057 65.095 2 1.4101E-11 20208 20230619_1885_Aki_TMTPro18x_K_F5 210.27 200.59 79430 72868 77268 80281 64619 86296 90037 94112 94454 99177 85482 91759 98480 87084 92876 101290 100740 112220 73486 66756 78528 80590 68912 86966 89463 95712 95676 99712 88759 93305 99866 90754 95024 102140 96395 106430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 447450000 12648 3173 11959 24240;24241;24242;24243 19472;19473;19474 19472 3 9606 Homo sapiens -0.057681734869220236 IDFGDSAR Unmodified 879.40865 0.4086456 3738 P63096;P63096-2;A0A3B3IUA8 GNAI1 Guanine nucleotide-binding protein G(i) subunit alpha-1 yes no 0 0 0 3 0 1 45.119 45.195 2 0.026381 11938 20230619_1882_Aki_TMTPro18x_K_F3 83.313 53.954 140660 115790 139030 145520 152650 165540 174760 138890 187090 164360 203910 215530 198080 167220 159420 190410 247280 220430 130060 106250 141630 144760 158030 165290 175230 144570 190430 166370 208200 214810 200590 175320 167790 192560 235560 209140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96543000 12649 3738 11960 24244 19475 19475 1 9606 Homo sapiens -0.03588238067425209 IDFGEAAR Unmodified 877.42938 0.42938104 3415 P08754 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 0 0 0 3.5 0.5 1 1 46.518 46.578 2 0.0027237 12594 20230619_1882_Aki_TMTPro18x_K_F3 122.18 83.207 747210 516940 621650 683640 609800 714850 684300 720080 882640 851270 852680 885570 996380 841250 675090 1044600 984790 931300 689300 474950 642150 677050 637330 720440 691930 738700 886950 854490 882300 896160 997350 879820 711240 1039000 938880 885950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 511640000 12650 3415 11961 24245;24246 19476;19477 19476 2 9606 Homo sapiens -0.014236476877613313 IDFSSIAVPGTSSPR Unmodified 1532.7835 0.78347187 4065 Q5TDH0-2;Q5TDH0;Q5TDH0-3 DDI2 Protein DDI1 homolog 2 yes no 0 0 0 2 0 1 60.142 60.153 3 3.6377E-14 18689 20230619_1881_Aki_TMTPro18x_K_F2 153.24 141.02 25883 21450 23471 24786 24623 28295 27588 29448 28558 28997 25379 25916 33105 28358 28850 32724 31938 33740 23917 19667 24071 24811 25575 28371 27680 29980 28936 29236 26535 26540 33345 29409 29603 32860 30541 32029 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39369000 12651 4065 11962 24247 19478 19478 1 9606 Homo sapiens 0.038391471640579766 IDFVGELNDK Unmodified 1148.5714 0.57135383 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B3KU93;A0A8V8TQ95;B3KTP2;A6NEC2;E9PPZ2;A0A7I2V604;E9PP11;E9PPD4;E9PJY4;A6NEC2-3 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 4 0 1 60.215 60.217 2 0.0022181 18410 20230619_1883_Aki_TMTPro18x_K_F4 120.27 40.206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12652 2933 11963 24248 19479 19479 1 9606 Homo sapiens 0.003011005439020664 IDFYFDENPYFENK Unmodified 1839.7992 0.79918151 1789 A0A8J8YYJ1;Q01105-3;A0A8I5KS71;B2RCX0;A0A024R895;Q5VXV3;A0A0C4DFV9;Q01105-4;Q01105-2;Q01105;P0DME0 SET;SETSIP Protein SET;Protein SETSIP yes no 0 0 0 5.17 1.07 2 2 1 1 63.93 63.961 2;3 3.3354E-05 20036 20230619_1883_Aki_TMTPro18x_K_F4 107.14 94.039 105160 87413 89964 114240 101550 115990 99778 105590 115730 123620 123760 135870 155880 126050 110910 155410 135590 144160 97129 80242 92969 113140 104610 116900 101240 109090 117420 124340 128040 137050 155900 131900 115180 154950 129550 137020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3405099999.9999995 12653 1789 11964 24249;24250;24251;24252;24253;24254 19480;19481;19482 19480 3 9606 Homo sapiens -0.08712611109558566 IDGDKDGFVTVDELK Unmodified 1649.8148 0.81483158 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-10;O43852-6;O43852-5;O43852-13;O43852-9;O43852-11;O43852-14 CALU Calumenin yes no 0 0 1 5.5 0.5 1 1 57.221 57.287 4 3.4929E-07 16787 20230619_1885_Aki_TMTPro18x_K_F5 123.63 98.572 61892 59172 66755 61258 67204 65630 73721 67246 63791 71675 77208 46777 54774 32569 90162 35854 34178 29977 57327 54171 67374 61806 69821 66127 73667 68705 66097 71401 77471 48173 58113 34320 87671 35835 33213 28550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45623000 12654 2386 11965 24255;24256 19483 19483 1 9606 Homo sapiens 0.01591675407485127 IDGNLVVRPYTPISSDDDK Unmodified 2103.0484 0.048413341 311 P00387-3;P00387;P00387-2;A0A8J8YWN6;A0A8I5KR71;A0A024R4X0;A0A8I5KW26;A0A8J8Z3C6;A0A8I5QKX1;Q6ZVI6;A0A8I5KYU1;A0A8I5QKT9;A0A8I5KPU0;B1AHF3;A0A8I5KVD2;A0A8I5QKL2 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form;NADH-cytochrome b5 reductase yes no 0 0 1 5 0.816 1 1 1 54.598 54.651 3 1.0399E-07 15669 20230619_1885_Aki_TMTPro18x_K_F5 117.38 80.61 271280 227440 244360 261290 219240 252280 286410 294870 303300 331680 336540 379760 406470 351990 336410 396710 404740 428340 250670 208510 250230 261100 231630 256800 285500 299280 309540 334590 347060 382320 409380 366370 347420 399550 386750 406410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1897399999.9999998 12655 311 11966 24257;24258;24259 19484;19485 19484 2 9606 Homo sapiens 0.04101107056294495 IDGPVISESTPIAETIMASSNESLVVNR Unmodified 2928.475 0.47501719 668 A0A024RBE7;P42167;G5E972 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 0 0 0 5 0 1 64.248 64.293 3 3.6179E-73 19875 20230619_1885_Aki_TMTPro18x_K_F5 276.96 261.65 7913.6 7153.8 8046.8 8700.9 6384.6 9005.9 10232 8114 8001.2 10472 9486.7 10616 12852 8899.9 10584 12883 10972 11810 7323.3 6560.1 8146.9 8663.6 6873 9059.3 10022 8421.6 8350 10456 9820.5 10712 12887 9455.6 10836 12815 10500 11226 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124370000 12656 668 11967 24260 19486 19486 1 9606 Homo sapiens 0.0879186791939901 IDGVSLLVQR Unmodified 1098.6397 0.63970816 747 A0A024RD36;Q6DKI1;B7Z4G0;R4GMU7;Q6DKI1-2 RPL7L1 60S ribosomal protein L7-like 1 yes no 0 0 0 1.5 0.5 1 1 57.472 57.479 2 3.7421E-05 17466 20230619_1880_Aki_TMTPro18x_K_F1 151.44 95.765 192100 145780 165420 176490 154730 193400 198400 184840 192740 191420 176950 187980 207940 169050 198520 211860 195580 204440 177340 133770 170210 175950 162920 194040 197320 189650 196120 193000 183790 190350 210740 177310 201950 211770 187220 194230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134760000 12657 747 11968 24261;24262 19487 19487 1 9606 Homo sapiens 0.09433389914443069 IDHILDAL Unmodified 908.49673 0.49673232 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 4.5 0.5 1 1 63.252 63.278 2 0.022397 19703 20230619_1883_Aki_TMTPro18x_K_F4 86.872 81.786 118750 50126 99739 115990 97076 94954 117240 123030 149840 127940 109720 106740 125880 101090 97049 139510 107850 122510 109320 46556 102950 111350 101580 98170 118030 123870 149190 128410 115110 109180 126580 106520 100030 138500 103180 116480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 442310000 12658 3384 11969 24263;24264 19488 19488 1 9606 Homo sapiens 0.03882382523170236 IDHYLGK Unmodified 844.4443 0.44430282 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4;A0A8Q3WL93;A0A8Q3WLT0;A0A8Q3WL80;E7EM57;Q0PHS1;A0A8Q3WL83;E9PD92;A2IBT6 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 7.5 0.5 1 1 45.861 45.924 3 0.0036619 11832 20230619_1888_Aki_TMTPro18x_K_F8 114.6 46.845 487670 126420 383180 423070 664990 540270 559480 569950 773000 627560 758450 820530 745120 654010 672120 740940 744140 804960 448220 118920 402210 403830 664700 537970 576550 581600 774370 637230 778560 818450 757600 684550 689120 746610 711720 763650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 592850000 12659 1464 11970 24265;24266 19489;19490;19491 19491 3 9606 Homo sapiens 0.015858441802379275 IDHYVLEYR Unmodified 1206.6033 0.60332266 4434 Q9BTV5;M0R366 FSD1 Fibronectin type III and SPRY domain-containing protein 1 yes no 0 0 0 6 0 1 48.298 48.377 3 0.0095994 13187 20230619_1886_Aki_TMTPro18x_K_F6 70.977 47.126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12660 4434 11971 24267 19492 19492 1 9606 Homo sapiens 0.00828513017700061 IDIDPEETVK Unmodified 1157.5816 0.58158416 3653 P54727;B4DEA3;Q53F10;Q5W0S5 RAD23B UV excision repair protein RAD23 homolog B yes no 0 0 0 2 0.816 1 1 1 54.059 54.086 3 1.1027E-05 16206 20230619_1881_Aki_TMTPro18x_K_F2 150.61 96.001 241880 183530 223650 237760 215850 260340 255270 246350 285650 290860 298820 323560 326890 266470 286730 349090 333700 352980 223420 168520 228710 235930 226110 261150 256060 253880 289890 292540 307350 325040 330780 281160 295220 349500 318960 335150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 803680000 12661 3653 11972 24268;24269;24270 19493;19494 19493 2 9606 Homo sapiens 0.009096634784782509 IDIDYQK Unmodified 893.44945 0.44944778 3850 Q13435;E9PPJ0;Q7Z3K9 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 0 4.5 0.5 1 1 50.394 50.448 2 0.014775 14190 20230619_1883_Aki_TMTPro18x_K_F4 112.17 30.537 611200 475920 516350 588690 616550 711980 657820 658960 828330 701630 785070 756960 797350 693810 618430 853980 857680 774460 564260 436740 534440 586780 634330 709280 666010 677930 832040 708850 807580 764230 805260 725990 646490 850490 817730 736730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 341680000 12662 3850 11973 24271;24272 19495;19496 19495 2 9606 Homo sapiens -0.0015389674780408313 IDIIPNPQER Unmodified 1193.6404 0.64043645 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF7;O14942 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 0 4.11 1.29 1 2 3 1 2 52.3 52.356 2;3 0.00013357 14653 20230619_1885_Aki_TMTPro18x_K_F5 108.7 80.298 1095900 882490 980270 1002200 824760 1047700 1001300 1065200 1149500 1323800 1271300 1252400 1359800 1138100 1165200 1542900 1304300 1422900 1012300 809070 1003300 1003300 875270 1056300 1004600 1093600 1168500 1321400 1302200 1271200 1375700 1199100 1198200 1536100 1247400 1352300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6629899999.999999 12663 751 11974 24273;24274;24275;24276;24277;24278;24279;24280;24281 19497;19498;19499;19500 19499 4 9606 Homo sapiens 0.05136184563457391 IDILDSALLRPGR Unmodified 1437.8304 0.83036248 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8;Q59GS3 PSMC5 26S protease regulatory subunit 8 yes no 0 0 1 2.5 0.5 1 1 61.216 61.236 3 8.6077E-16 18913 20230619_1882_Aki_TMTPro18x_K_F3 210.41 156.65 282300 231450 255050 288710 248070 307410 306800 296510 328340 348050 312420 313850 360070 308180 312980 385020 343010 376250 260830 212370 261520 287080 260110 309110 306590 305060 332880 347950 323400 320030 363790 322180 321150 384960 328120 357330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 840400000 12664 1202 11975 24282;24283 19501;19502 19502 2 9606 Homo sapiens 0.1289605150582247 IDILTELR Unmodified 971.56515 0.56514624 1621 B0AZS5;A0A6Q8PFA6;A0A6Q8PH57;O00139-2;A0A6Q8PGH7;A0A6Q8PG37;B4DM85;O00139-1;O00139-5;O00139;O00139-4;A0A6Q8PGG1 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 5.5 0.5 1 1 61.892 61.942 2 0.0023196 18961 20230619_1886_Aki_TMTPro18x_K_F6 128.61 71.048 150270 122820 149930 158180 108860 133480 130830 124730 150100 177070 176350 158710 199480 163240 162660 200940 176030 188760 138950 112730 151750 156510 117040 136640 131340 129510 153010 175590 180560 162200 201050 170270 167010 200530 168380 179370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36583000 12665 1621 11976 24284;24285 19503 19503 1 9606 Homo sapiens 0.078226271030303 IDISNVK Unmodified 787.44397 0.44396847 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 RPL6 60S ribosomal protein L6 yes no 0 0 0 7 0.816 1 1 1 49.807 49.885 2 0.019704 13852 20230619_1886_Aki_TMTPro18x_K_F6 109.86 29.683 567000 406240 491040 543290 565470 618200 589830 597640 680920 622520 623940 628420 746520 565290 541960 700800 754290 670130 523300 373230 506570 538280 582360 618890 596100 612580 686370 628110 648030 635690 748040 592660 567240 699890 719060 637130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3934799999.9999995 12666 680 11977 24286;24287;24288 19504;19505 19504 2 9606 Homo sapiens 0.041744244603819425 IDISPVLLQK Unmodified 1124.6805 0.68051035 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2;Q05D78;Q9BS79;F5GXT0 MRE11A Double-strand break repair protein MRE11A yes no 0 0 0 2 0 1 62.031 62.041 3 0.002243 19508 20230619_1881_Aki_TMTPro18x_K_F2 92.732 69.356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12667 229 11978 24289 19506 19506 1 9606 Homo sapiens 0.12315731234025407 IDIVENR Unmodified 857.46068 0.46068117 3376 Q5T6L4;P00966;A8KAP9;B4E395 ASS;ASS1 Argininosuccinate synthase yes no 0 0 0 3 0 1 44.726 44.799 2 0.012826 11738 20230619_1882_Aki_TMTPro18x_K_F3 114.78 61.229 176300 124650 139680 322670 598380 539200 457360 451130 551320 245910 231970 371260 322360 223300 323370 394640 343190 425050 162600 115700 152960 311570 580660 526560 471350 461370 543040 263840 258070 366150 326070 244440 330320 395220 328730 403090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196080000 12668 3376 11979 24290 19507 19507 1 9606 Homo sapiens 0.026249253463333844 IDKTDYMVGSYGPR Unmodified 1600.7555 0.75554256 3634 V9HWE8;P52565;J3KTF8;J3QQX2 HEL-S-47e;ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 0 0 1 4.5 3.5 1 1 50.429 50.467 3 1.2663E-11 14538 20230619_1880_Aki_TMTPro18x_K_F1 178.22 148.53 719540 771600 886920 790190 714440 643910 915240 759830 437670 886080 875430 349860 367720 207090 1192400 154370 169520 81173 667910 706080 883750 795480 758130 665840 897060 771960 491570 870970 853530 375020 428310 216470 1135800 155380 171470 78198 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 801430000 12669 3634 11980 24291;24292 19508;19509 19508 2 9606 Homo sapiens -0.020804990876968077 IDKTDYMVGSYGPR Oxidation (M) 1616.7505 0.75045718 3634 V9HWE8;P52565;J3KTF8;J3QQX2 HEL-S-47e;ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 0 1 1 7.5 0.5 1 1 46.719 46.788 3 0.012459 12141 20230619_1888_Aki_TMTPro18x_K_F8 67.964 52.568 277790 277290 318840 294700 344020 227130 329540 272380 185830 294640 337400 123620 148240 92613 401730 83651 86234 55496 257540 253880 320510 295590 353210 236450 328860 275910 203750 291000 329820 132590 168610 96372 384890 83705 85345 53122 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 529380000 12670 3634 11980 24293;24294 19510;19511 19511 2326 2 9606 Homo sapiens -0.03324802950328376 IDKWDGSAVK Unmodified 1117.5768 0.57677356 2451 B4DDB9;E9PI68;Q15005;E9PL01;H0YE04 SPCS2 Signal peptidase complex subunit 2 yes no 0 0 1 8 0 1 48.88 48.946 3 0.0010722 13069 20230619_1888_Aki_TMTPro18x_K_F8 95.401 60.177 223640 195740 233430 230750 269820 287420 287290 293900 276440 256140 269690 180140 193480 129770 271970 122760 144800 75803 206960 179460 236860 230990 277640 286520 288350 298640 281870 258500 273250 184690 203180 135310 267310 121410 139300 72749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196080000 12671 2451 11981 24295 19512 19512 1 9606 Homo sapiens 0.022688241263722375 IDLGERPVVQR Unmodified 1280.7201 0.72008375 2120 A8K8E1;Q8TC07-2;Q8TC07-3;Q8TC07;C9JA93 TBC1D15 TBC1 domain family member 15 yes no 0 0 1 7 0 1 42.392 42.467 3 2.5386E-06 10281 20230619_1887_Aki_TMTPro18x_K_F7 133.05 92.063 83337 70324 83909 84822 82460 96945 94442 89294 105240 102090 106590 105540 110650 87779 94646 114180 111300 101700 77079 64499 85186 84641 86134 96929 94868 92106 106660 102600 109460 106410 112010 92534 97548 113570 106260 96765 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94763000 12672 2120 11982 24296 19513 19513 1 9606 Homo sapiens 0.0909525123745425 IDLGFGTK Unmodified 849.45962 0.45961853 4268 Q8TCG1;Q8TCG1-2;A0A894J8Q9 KIAA1524 Protein CIP2A yes no 0 0 0 1 0 1 57.01 57.01 2 0.0094656 17274 20230619_1880_Aki_TMTPro18x_K_F1 109.71 33.68 72018 59793 58592 72706 60629 81035 68332 69559 85284 81273 76839 70602 88508 69504 70671 96765 80019 81395 66496 54847 60769 72448 63195 81016 68973 72165 85608 81217 79684 72181 89085 73189 72839 95862 76480 77467 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50571000 12673 4268 11983 24297 19514 19514 1 9606 Homo sapiens 0.028867109774409982 IDLLAQPR Unmodified 924.53927 0.53926584 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B3KME6;Q6AZE1 CEP170 Centrosomal protein of 170 kDa yes no 0 0 0 8 0 1 52.413 52.49 2 0.011898 14597 20230619_1888_Aki_TMTPro18x_K_F8 96.253 52.118 106960 87779 110710 117360 117470 134100 111110 106160 135140 132490 114890 115720 120110 103670 102480 120920 150690 127030 98930 80602 112280 116260 121380 133680 113160 111110 135590 132030 119040 117770 121660 108280 107270 121530 143550 120680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162450000 12674 1960 11984 24298 19515 19515 1 9606 Homo sapiens 0.07397777651419801 IDLLDRK Unmodified 871.51272 0.51271674 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 1 7.5 0.5 1 1 48.814 48.891 3 0.018567 13033 20230619_1888_Aki_TMTPro18x_K_F8 83.206 25.925 396450 261810 275720 353980 259190 356820 323270 348750 489390 428010 452520 716060 625170 587930 413750 997170 507420 1058800 365220 240660 290420 349790 273460 360180 327360 359110 487630 437210 475090 709740 623080 631920 433140 996830 488410 1003000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 355490000 12675 1102 11985 24299;24300 19516;19517 19517 2 9606 Homo sapiens 0.071820887600893 IDLLPEGK Unmodified 883.50148 0.50148335 3672 P57772;C9J8T0;P57772-2 EEFSEC Selenocysteine-specific elongation factor yes no 0 0 0 5 0 1 56.296 56.357 2 0.018103 16414 20230619_1885_Aki_TMTPro18x_K_F5 90.709 20.184 69383 52120 61000 58089 46454 62929 69324 64016 76569 81650 88053 87717 93120 83060 73870 104960 108730 106680 64060 47789 62447 58274 50129 63280 68804 65807 78054 81758 90001 88657 94025 86976 77549 105120 103680 101320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26829000 12676 3672 11986 24301 19518 19518 1 9606 Homo sapiens 0.05507266665949828 IDLPEYQGEPDEISIQK Unmodified 1972.963 0.96295238 1079 A0A0S2Z3W7;Q9BY32;Q9BY32-2;Q5NT82 ITPA Inosine triphosphate pyrophosphatase yes no 0 0 0 5.5 0.5 1 1 61.264 61.316 3 4.591E-09 18457 20230619_1885_Aki_TMTPro18x_K_F5 121.45 100.49 99538 84406 91496 103570 99887 124110 114190 112210 147330 114900 108150 114730 132410 109960 113370 145740 131690 125690 92000 77426 93841 103270 103650 123630 115280 115520 146600 116070 113910 116360 133480 115460 116800 144670 125780 119610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 361340000 12677 1079 11987 24302;24303 19519 19519 1 9606 Homo sapiens 0.015389418706490687 IDLQVPSSESK Unmodified 1201.619 0.6190323 3122 Q92541;I7GPQ7 RTF1 RNA polymerase-associated protein RTF1 homolog yes no 0 0 0 5.67 0.471 1 2 51.902 51.978 3 0.0015141 14613 20230619_1885_Aki_TMTPro18x_K_F5 85.845 59.802 43172 39581 45335 43894 48098 55075 49306 50185 60939 53248 57168 56130 64394 49800 56978 65173 60746 58057 39966 36263 45909 44138 49799 54737 50012 51678 61261 53759 59138 56667 65108 52401 58321 64827 58066 55228 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92906000 12678 3122 11988 24304;24305;24306 19520;19521 19520 2 9606 Homo sapiens 0.02628754744091566 IDLTLLNR Unmodified 956.56548 0.56548059 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 2 0 1 59.015 59.028 2 0.013808 18218 20230619_1881_Aki_TMTPro18x_K_F2 87.251 39.508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12679 1863 11989 24307 19522 19522 1 9606 Homo sapiens 0.0854604682289164 IDMNLTDLLGELQR Unmodified 1629.8396 0.83960654 2974;1375 F5H365;Q15436;B4DSQ5;B4E0Q9;B4DF60;Q15436-2;B4DRA5;B4DJW8;A0A2R8YFH5;Q15437;Q5QPE2 SEC23A;SEC23B Protein transport protein Sec23A;Protein transport protein Sec23B no no 0 0 0 6.5 0.5 1 1 66.006 66.04 3 1.8835E-12 20517 20230619_1887_Aki_TMTPro18x_K_F7 191.06 142.35 31434 24339 23741 28295 26856 38856 30427 28114 34893 36493 31684 33117 37363 34363 33721 37707 34877 39476 28997 22322 24844 28376 27844 38223 30598 29687 35196 36347 32921 33804 37799 35579 34441 37928 33391 37459 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184670000 12680 2974;1375 11990 24308;24309 19523 19523 1 9606 Homo sapiens 0.04988032009214294 IDNLDVNR Unmodified 957.48796 0.48795855 3306 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 3.5 0.5 1 1 43.722 43.778 2 0.00071735 11236 20230619_1882_Aki_TMTPro18x_K_F3 157.68 20.881 258160 235790 244450 244480 257090 290810 257200 264620 339240 283210 309470 284330 306840 265460 288660 286610 339560 313500 238780 215900 249640 246920 266280 290050 261910 272590 339600 285430 318610 288040 312470 275620 296630 289210 324220 297580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 480110000 12681 3306 11991 24310;24311 19524;19525 19524 2 9606 Homo sapiens 0.007514088867196733 IDNSQVESGSLEDDWDFLPPK Unmodified 2390.0914 0.091400367 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;B4DHR1;K7EJB9;B4E2Y9 CALR;HEL-S-99n Calreticulin yes no 0 0 0 2.5 0.5 1 1 63.615 63.646 3 1.2941E-06 20238 20230619_1881_Aki_TMTPro18x_K_F2 91.378 71.792 51222 42545 47287 48070 45728 55985 52608 58354 58369 58304 59392 67670 63382 55713 63157 81365 67689 80047 47338 38999 48352 48218 47862 56058 52849 59427 59191 59195 61133 67888 64571 59203 64584 81215 64806 75998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199270000 12682 1691 11992 24312;24313 19526;19527 19526 2 9606 Homo sapiens -0.04804167676911675 IDNSQVESGSLEDDWDFLPPKK Unmodified 2518.1864 0.18636339 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;B4DHR1;K7EJB9;B4E2Y9 CALR;HEL-S-99n Calreticulin yes no 0 0 1 4.6 1.02 1 1 2 1 61.845 61.882 3;4 1.0463E-23 18750 20230619_1885_Aki_TMTPro18x_K_F5 188.26 167.37 203720 173910 191990 217020 175840 219810 219910 210710 220000 226970 265740 254340 236010 214810 259000 271080 254480 294760 188330 159560 195950 215640 185280 221790 219230 216410 225870 229310 269200 255750 242970 225820 262810 272780 243810 279570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2205400000 12683 1691 11993 24314;24315;24316;24317;24318 19528;19529 19529 2 9606 Homo sapiens -0.01200234205725792 IDNYIPIF Unmodified 993.51713 0.51713341 2247 J3QL14;B2R7M1;F5GYQ1;B7Z6L9;P61421;B7Z788 ATP6V0D1 V-type proton ATPase subunit d 1 yes no 0 0 0 7 0.816 1 1 1 66.787 66.815 2 0.019685 20833 20230619_1887_Aki_TMTPro18x_K_F7 100.74 87.754 57924 46180 49725 63145 43084 51718 60742 57906 57667 65144 71144 70423 72301 63408 63611 74375 69132 77948 53490 42420 51187 62205 45782 53289 60137 58959 59473 65584 72406 71030 73347 66214 65205 74734 66153 73965 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 140340000 12684 2247 11994 24319;24320;24321 19530 19530 1 9606 Homo sapiens 0.020115531829901556 IDPENAEFLTALCELR Unmodified 1889.9193 0.91931342 1715 A0A7P0TBP9;Q13325-2;Q13325 IFIT5 Interferon-induced protein with tetratricopeptide repeats 5 yes no 0 0 0 4 0 1 64.57 64.579 3 6.1459E-06 20258 20230619_1883_Aki_TMTPro18x_K_F4 110.12 97.29 5581.5 5472.5 4990.7 6516.4 7253.3 8075 6925.3 7507.9 7346.1 6430.6 7584.4 8186.1 8157.4 8136.8 9563.4 6529.4 9530.4 9812 5163 5016 5162.9 6513.4 7347.6 8033.7 7014.7 7679 7467.7 6612.5 7804.6 8226.1 8382.1 8309 9680.7 6781.5 9120.8 9283.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39772000 12685 1715 11995 24322 19531 19531 1 9606 Homo sapiens 0.009950538925522778 IDPHAPNEMLYGR Oxidation (M) 1527.714 0.71401209 277 Q6FHH6;Q53TN2;B2R602;A0A024R3Z5;O43813;E9PHS0 LANCL1 LanC-like protein 1 yes no 0 1 0 4 0 1 41.902 41.945 3 0.00034101 10371 20230619_1883_Aki_TMTPro18x_K_F4 92.747 74.002 64133 52677 59926 74204 68006 60724 72802 69991 78005 68504 79322 76692 78482 64598 71117 83440 78384 87944 59271 48398 61418 72969 70016 62666 73285 70867 79188 69560 81268 77121 79764 68043 72920 83758 74993 83447 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98118000 12686 277 11996 24323 19532 19532 172 1 9606 Homo sapiens -0.02873635056380408 IDPHAPNEMLYGR Unmodified 1511.7191 0.71909747 277 Q6FHH6;Q53TN2;B2R602;A0A024R3Z5;O43813;E9PHS0 LANCL1 LanC-like protein 1 yes no 0 0 0 5.5 0.5 1 1 46.86 46.94 3 9.2576E-05 12454 20230619_1885_Aki_TMTPro18x_K_F5 78.287 65.727 99017 71611 97057 100860 97059 119490 100840 113730 117820 107240 141460 129500 126680 124740 123680 98844 157980 146110 91477 65827 98789 99675 101040 119210 102070 116370 119910 109430 143300 130310 129750 127450 127560 102490 150740 138320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174050000 12687 277 11996 24324;24325 19533 19533 1 9606 Homo sapiens -0.01629331193771577 IDPLALVQAIER Unmodified 1336.7715 0.77145062 1635 Q14669;A0A6Q8PGG9;Q14669-3;Q14669-2;A0A6Q8PHK0;A0A994J569;A0A994J4J0;H7C1L9;C9JLD7;A0A994J755;A0A994J4J6;Q14669-4 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 0 0 0 8 0 1 65.537 65.556 3 6.7723E-05 20161 20230619_1888_Aki_TMTPro18x_K_F8 117.2 94.082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12688 1635 11997 24326 19534 19534 1 9606 Homo sapiens 0.11653575211494172 IDPLAPLDK Unmodified 980.55425 0.5542472 3436 Q6IRT1;Q6FI45;P11766;Q5U043;Q2VIM7;H0YAG8 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 yes no 0 0 0 5.5 0.5 1 1 61.494 61.546 3 0.010392 18588 20230619_1885_Aki_TMTPro18x_K_F5 61.65 17.447 62850 50826 52998 61180 54501 77245 68923 69098 86949 66943 75274 78938 86387 68175 71876 93087 73551 92156 58036 46622 54759 61135 57065 76655 69194 71092 87019 68182 78279 79276 87091 72011 73563 93021 70486 87472 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225770000 12689 3436 11998 24327;24328 19535 19535 1 9606 Homo sapiens 0.06319224728758854 IDPLLPK Unmodified 794.49019 0.49019038 1899 Q9BYD6;A0PJ79 MRPL1 39S ribosomal protein L1, mitochondrial yes no 0 0 0 7.5 0.5 1 1 55.724 55.786 2 0.072565 16074 20230619_1888_Aki_TMTPro18x_K_F8 76.035 17.867 128430 96432 117570 139800 97833 126180 131830 117010 140560 147500 149410 146760 154240 128150 145650 170430 146710 158750 118610 88660 120200 137370 104250 128340 131220 121090 143080 147410 153090 148430 156820 135040 148460 169860 140450 150860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87440000 12690 1899 11999 24329;24330 19536 19536 1 9606 Homo sapiens 0.08472489362463875 IDPNPADSQK Unmodified 1083.5197 0.51965261 3313 O75663 TIPRL TIP41-like protein yes yes 0 0 0 4 0 1 43.16 43.204 2 0.0048478 10948 20230619_1883_Aki_TMTPro18x_K_F4 102.06 64.87 17700 11709 21107 23009 24576 24072 21559 22688 23965 18586 27514 29603 27849 24634 25991 19116 27200 28038 16373 10816 21216 22300 25139 24218 22001 23173 24394 19346 28092 29373 28325 25283 26489 19825 26019 26533 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8718900 12691 3313 12000 24331 19537 19537 1 9606 Homo sapiens -0.018766431499898317 IDPSALVQK Unmodified 969.5495 0.54949617 2755 C9JJU7;Q9NSI2-2;Q9NSI2 FAM207A Protein FAM207A yes no 0 0 0 8 0 1 55.418 55.48 3 0.00083379 15911 20230619_1888_Aki_TMTPro18x_K_F8 88.948 58.694 42876 36770 39808 39766 37456 47787 45645 42943 52690 54604 45447 45642 54852 43385 43779 55674 55227 50413 39635 33688 40669 40035 39376 47601 45759 44512 53033 54295 47376 46659 55151 45495 45406 55421 52697 47955 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8692000 12692 2755 12001 24332 19538 19538 1 9606 Homo sapiens 0.06350340586004677 IDPSKPESILK Unmodified 1225.6918 0.69180331 3899 Q14696 MESDC2 LDLR chaperone MESD yes yes 0 0 1 7.5 0.5 1 1 52.236 52.312 3 0.0032743 14491 20230619_1888_Aki_TMTPro18x_K_F8 77.078 42.394 243890 212330 221450 236000 251680 284810 265900 255770 282110 294380 330180 343950 324560 289250 330920 354630 331240 365180 225440 194570 227380 237080 259500 283690 267800 264360 288440 296930 336420 345100 331780 303540 336560 355850 317160 346610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 660230000 12693 3899 12002 24333;24334 19539 19539 1 9606 Homo sapiens 0.08798508537506677 IDPSLGIIAK Unmodified 1025.6121 0.61209643 337 A0A024R5F4;P50416;B2RAQ8;P50416-2;H3BP22;H3BUV7;H3BUJ0 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 0 4.5 3.5 1 1 59.784 59.821 3 0.00013357 17699 20230619_1888_Aki_TMTPro18x_K_F8 123.86 109.87 28262 19045 22705 29890 36749 41469 42113 40760 49512 28829 26915 28293 33148 23138 29734 35103 32672 30950 26061 17535 23795 29421 37229 41012 42329 41360 49065 29794 28965 28594 33452 24688 30486 34833 31220 29447 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11432000 12694 337 12003 24335;24336 19540;19541 19541 2 9606 Homo sapiens 0.10031486654179389 IDPSTLQMWANILK Oxidation (M) 1644.8545 0.85452832 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2;O15294-4 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 1 0 4 0 1 65.756 65.768 3 0.011137 20710 20230619_1883_Aki_TMTPro18x_K_F4 62.042 43.904 5886 3606.8 3520.8 6005.5 5751.6 5746.1 4622.3 5822.8 5912 3896.4 4874.8 6727.5 6940 5117.1 7547 6838 7208.5 7835.1 5416 3324.9 3820.2 5857 5771.5 5829.5 4766.9 5892.3 5904.9 4128.8 5156.9 6647 7041.6 5425.2 7640.7 6901.3 6904.7 7429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3189500 12695 1842 12004 24337 19542 19542 1176 1 9606 Homo sapiens 0.057895238772289304 IDPSTLQMWANILK Unmodified 1628.8596 0.8596137 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2;O15294-4 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 0 4.5 0.5 1 1 66.615 66.643 3 1.5225E-07 20825 20230619_1885_Aki_TMTPro18x_K_F5 112.44 87.879 17984 11450 14799 17488 13617 15417 15605 17020 17632 19678 20918 19113 19509 20047 19255 23730 24039 25074 16582 10542 15296 17131 14304 15777 15692 17348 17985 19725 21234 19476 19972 20832 19874 23848 22961 23798 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12716000 12696 1842 12004 24338;24339 19543;19544 19543 2 9606 Homo sapiens 0.07033827739837761 IDPTLCR Unmodified 873.43784 0.43783723 3571 P41091;Q2VIR3;Q2VIR3-2 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 5 0.816 1 1 1 42.725 42.789 2 0.0061163 10689 20230619_1886_Aki_TMTPro18x_K_F6 110.61 10.692 119270 96732 103740 105090 125350 128220 124410 121450 140650 126060 123910 121150 149840 108490 118970 151420 149650 137100 110160 88646 107000 105800 128440 127810 125980 124650 141730 127040 129020 122860 150550 114680 123380 150570 142800 130420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 481820000 12697 3571 12005 24340;24341;24342 19545;19546 19546 2 9606 Homo sapiens -0.003944170427871541 IDPTVLLGALPLR Unmodified 1376.8391 0.83913625 2482 B4DGK8;E9PQM0;Q8WUK0-2;Q8WUK0-3;Q8WUK0 PTPMT1 Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 yes no 0 0 0 5 0 1 65.693 65.737 2 1.5498E-05 20473 20230619_1885_Aki_TMTPro18x_K_F5 145.99 112.19 29321 20382 26598 29890 25401 27940 26930 28487 31558 29468 36004 39301 34167 29384 33779 32973 40666 47715 27066 18748 27244 29369 26532 28405 27225 29101 32050 30022 36675 39104 34918 30844 34732 33900 38891 45138 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12788000 12698 2482 12006 24343 19547 19547 1 9606 Homo sapiens 0.1657902514232319 IDPTVTMMQVEEKPDVTYSDVGGCK Oxidation (M) 2814.2762 0.27618272 1235 C9JX88;A0A140VK70;P35998;Q75L23;P35998-2 PSMC2 26S protease regulatory subunit 7 yes no 0 1 1 6 0 1 59.294 59.356 4 0.00015949 17891 20230619_1886_Aki_TMTPro18x_K_F6 77.045 61.917 11222 10583 12535 11555 9686.3 11556 12560 14437 12860 14296 13237 13800 15452 12907 12183 16829 19415 17586 10397 9693.4 12577 11601 10364 11753 12518 14538 13110 14432 13663 14007 15552 13555 12869 16875 18494 16702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102530000 12699 1235 12007 24344 19548 19548 776 1 9606 Homo sapiens -0.0583843197537135 IDQLEGDHQLIQEALIFDNK Unmodified 2338.1805 0.18049015 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;B4DFY0;B3KUX9;A1L0V1;B7Z2W3;H0YJW3;H7C5W8;H0YJ11;Q5ZEZ4 ACTN1 Alpha-actinin-1 yes no 0 0 0 5 0 1 63.085 63.132 3 3.7208E-11 19371 20230619_1885_Aki_TMTPro18x_K_F5 122.77 107 31862 24331 29098 28332 26027 29449 33679 27260 33084 36354 35013 35606 34417 32419 32937 42288 33132 40493 29428 22317 29741 28308 27485 29651 33488 28264 33832 36230 35816 36077 35095 34052 33586 42208 31750 38452 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30297000 12700 387 12008 24345 19549 19549 1 9606 Homo sapiens 0.06492712073304574 IDQVNQLLELDHQK Unmodified 1691.8842 0.88424855 3691 Q53HJ0;Q59EL2;P61201;P61201-2;B2R6N0;B4DIH5 COPS2 COP9 signalosome complex subunit 2 yes no 0 0 0 6.5 0.5 1 1 58.877 58.934 3 4.7292E-07 17380 20230619_1887_Aki_TMTPro18x_K_F7 136.17 108.83 49720 42564 42047 47683 38941 50562 53340 44942 56341 59286 52180 50794 61992 50084 48844 59455 55980 58528 45929 39009 43355 47776 41153 50778 53015 46709 57097 58901 54146 51921 62320 52206 50351 59515 53510 55591 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197640000 12701 3691 12009 24346;24347 19550 19550 1 9606 Homo sapiens 0.06598179146885741 IDQYQGADAVGLEEK Unmodified 1634.7788 0.77878042 2268 V9HW51;B2R960;O43396;Q59G46;K7ER96;K7EML9 HEL-S-114;TXNL1 Thioredoxin-like protein 1 yes no 0 0 0 2 0 1 53.575 53.603 3 1.1112E-07 15996 20230619_1881_Aki_TMTPro18x_K_F2 128.64 108.26 42725 36684 47930 48635 38672 53110 51095 48086 58814 62564 58536 54766 66601 58526 57669 59458 67763 60086 39559 33676 48138 48187 41307 53219 51043 49864 59500 62231 60397 56072 67313 60301 59359 59776 64684 57091 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89190000 12702 2268 12010 24348 19551 19551 1 9606 Homo sapiens -0.013217817693657707 IDRDSYSPR Unmodified 1107.5309 0.530886 2282 B2RA91;F8VXG7;Q99590-2;Q99590;Q05BS8;A0A0A0MTP7;B4DZM2 SCAF11;SFRS2IP Protein SCAF11 yes no 0 0 1 4.5 0.5 1 1 33.471 33.541 3 0.0014662 6987 20230619_1885_Aki_TMTPro18x_K_F5 96.331 66.858 29218 21926 24431 24245 32504 30829 29123 31617 36613 34246 37983 36843 39274 31528 32304 35942 43744 38208 26967 20102 25329 24395 33018 30713 29797 32298 36931 34549 38945 37109 39708 32942 33619 36166 41705 36287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23807000 12703 2282 12011 24349;24350 19552 19552 1 9606 Homo sapiens -0.01857821055864406 IDRIEESDQGPYAIILAPTR Unmodified 2256.175 0.17501084 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8;A0A8V8TQ76;A0A8V8TRI2 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 0 1 5.5 0.5 1 1 59.714 59.772 3 2.7702E-45 17990 20230619_1886_Aki_TMTPro18x_K_F6 261.83 235.36 84068 70641 74839 85944 74197 90319 82693 85029 92199 92860 98165 98326 101370 92359 93225 120560 107530 128290 77678 64796 76857 85587 77444 90863 83207 87448 93641 93600 100580 99429 103030 96946 95892 121040 102890 121690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64920000 12704 117 12012 24351;24352 19553;19554 19554 2 9606 Homo sapiens 0.09717033281503973 IDRLDGAHAPELTK Unmodified 1534.8104 0.81035532 1180 A0A140VJK1;O76003 GLRX3 Glutaredoxin-3 yes no 0 0 1 6 0 1 45.484 45.57 3 0.0044292 11942 20230619_1886_Aki_TMTPro18x_K_F6 71.241 44.092 60709 47275 57828 58365 65018 71655 68439 66719 81385 72544 80819 74677 84274 63108 67474 91746 91981 87525 56097 43382 59098 58211 67078 71336 69204 68650 82130 73088 83034 75391 85071 67027 70393 91418 87739 83193 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62018000 12705 1180 12013 24353 19555 19555 1 9606 Homo sapiens 0.06434255775252495 IDRPEAISEER Unmodified 1313.6575 0.65754307 3991 Q53F37;Q9Y6B6;D6RD69;Q9H029;D6R9R5 SAR1B;DKFZp434B2017 GTP-binding protein SAR1b yes no 0 0 1 1.5 0.5 1 1 36.707 36.736 3 1.8058E-05 8390 20230619_1881_Aki_TMTPro18x_K_F2 142.51 111.08 103340 79263 96835 106530 95873 104440 108520 112800 137310 133290 128760 134200 148880 118150 122840 171640 149330 144670 95467 72805 98953 105310 100050 105950 109590 115190 137950 133630 133410 135710 150050 125230 127100 169970 142590 137720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 224560000 12706 3991 12014 24354;24355 19556 19556 1 9606 Homo sapiens 0.013260603786193315 IDRTDAISEEK Unmodified 1275.6307 0.63065962 4052 Q5SQT9;Q9NR31;Q8NG23;Q6FID4;Q9NR31-2;H0Y5E8 SAR1A;SARA1 GTP-binding protein SAR1a yes no 0 0 1 2.5 0.5 1 1 40.882 40.941 3 2.4743E-05 10213 20230619_1881_Aki_TMTPro18x_K_F2 130.36 105.98 186550 139840 173020 154000 174960 201590 185610 177260 281880 210670 251810 299280 268670 260690 212440 358420 358920 359690 172310 128210 176800 155080 182160 199700 189470 183690 280240 214030 260730 298610 271440 275120 225910 358200 342000 341620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 269100000 12707 4052 12015 24356;24357 19557;19558 19557 2 9606 Homo sapiens 0.0038695176742749027 IDRTEFIPSTDPFQK Unmodified 1792.8996 0.89956426 4519 Q9H6E4 CCDC134 Coiled-coil domain-containing protein 134 yes yes 0 0 1 8 0 1 57.374 57.426 3 0.016749 16786 20230619_1888_Aki_TMTPro18x_K_F8 62.69 36.255 26370 21383 21559 29541 25363 30165 27595 28748 36694 33195 31660 32140 33981 33081 30658 40818 33902 40737 24346 19643 22410 29151 26148 30412 27969 29586 36666 33294 32823 32721 34485 34486 31473 40858 32453 38668 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13489000 12708 4519 12016 24358 19559 19559 1 9606 Homo sapiens 0.03483045944062724 IDSAPLALLHK Unmodified 1176.6867 0.68665836 2586 E7EPP6;B4DT73;O14757-2;O14757;O14757-3;E9PPA5 CHEK1 Serine/threonine-protein kinase Chk1 yes no 0 0 0 2 0 1 57.068 57.084 3 7.2211E-05 17434 20230619_1881_Aki_TMTPro18x_K_F2 124.42 92.292 37132 37610 43484 39101 35089 40319 38809 37782 42224 43374 40115 32451 40540 32749 48002 39073 36132 35557 34435 34427 43489 39414 37207 40639 39046 38925 42760 43207 41248 33469 41690 34123 47975 38999 34681 33811 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99007000 12709 2586 12017 24359 19560 19560 1 9606 Homo sapiens 0.10538249465548688 IDSDISGTLK Unmodified 1047.5448 0.54480473 2984 F8W031;F8VXJ7;Q9Y2B0;F8W1K5;H0YI18 CNPY2 Protein canopy homolog 2 yes no 0 0 0 4.5 0.5 1 1 52.004 52.053 2 1.078E-06 14651 20230619_1885_Aki_TMTPro18x_K_F5 178.55 112.28 129610 101750 116300 127280 148900 159820 150130 147320 183640 144270 191830 199490 163950 148340 168540 198320 213650 216220 119710 93379 119810 126850 152160 158850 152310 151300 185290 147710 195270 198360 168550 157280 173960 199390 204000 205170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195500000 12710 2984 12018 24360;24361 19561 19561 1 9606 Homo sapiens 0.022934116525675563 IDSLSAQLSQLQK Unmodified 1429.7777 0.77765821 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 2 0.816 1 1 1 61.591 61.605 3 1.2615E-15 19296 20230619_1881_Aki_TMTPro18x_K_F2 202.29 154.29 75964 56584 70841 119140 117280 197060 178080 199240 257400 179430 175050 216590 212850 215340 294380 304980 290900 341430 70163 52302 73563 116000 120430 193040 178260 202680 254190 183710 185620 218310 220250 226810 297790 306990 278710 323720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 767470000 12711 1428 12019 24362;24363;24364 19562 19562 1 9606 Homo sapiens 0.07996048652375976 IDTIEIITDR Unmodified 1187.6398 0.63976774 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28;A0A087WUI2;I6L957;A0A7I2V4N0;A0A7I2YQN4 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 3 1.22 1 2 2 2 1 59.708 59.726 2;3 7.2824E-07 18265 20230619_1882_Aki_TMTPro18x_K_F3 183.67 136.59 1214300 883800 938390 1178100 943730 1292600 1111000 1183800 1458700 1412500 1306500 1705700 1808900 1785400 802270 3169500 842110 2274200 1119900 811890 978020 1166500 987650 1295100 1121300 1223000 1461100 1424800 1370900 1723700 1784100 1909300 849770 3105000 815250 2164300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 6868499999.999999 12712 3491 12020 24365;24366;24367;24368;24369;24370;24371;24372 19563;19564;19565;19566 19564 4 9606 Homo sapiens 0.05345345123760126 IDTMGTYHGMTLK Oxidation (M) 1482.6847 0.6846858 1500 A0A3B3IRP5;Q6P1J9;A0A0S2Z5M9;A0A2R8YHB3;A0A0S2Z5N1 CDC73 Parafibromin yes no 0 1 0 8 0 1 47.234 47.282 3 6.308E-05 12388 20230619_1888_Aki_TMTPro18x_K_F8 105.19 83.318 56926 45221 55490 58137 60361 72442 60360 55118 75706 64807 64354 60816 69195 58050 63062 74323 67918 69490 52617 41511 56583 57819 62386 71753 61322 57779 75793 64909 66748 61858 70180 60835 64565 74123 64947 66047 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22648000 12713 1500 12021 24373 19567 19567 1002 1 9606 Homo sapiens -0.03734915396876204 IDTTHLLDSLR Unmodified 1282.6881 0.68811492 2278 B2RA29;I3L1H5;B4DNK0;Q9BZG8-2;Q9BZG8;Q9BZG8-1 DPH1 Diphthamide biosynthesis protein 1 yes no 0 0 0 7 0 1 57.529 57.585 3 3.5079E-12 16818 20230619_1887_Aki_TMTPro18x_K_F7 174.77 114.41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12714 2278 12022 24374 19568 19568 1 9606 Homo sapiens 0.058078387636669504 IDVAFVDR Unmodified 933.49198 0.4919813 3937 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 4 0 1 53.543 53.562 2 0.0027232 15605 20230619_1883_Aki_TMTPro18x_K_F4 122.19 67.576 167700 131440 148420 160750 159490 194040 183300 180840 208880 161570 159610 151110 169970 140340 172490 177530 207510 159430 154880 120610 152650 160370 165640 193320 184180 185130 209260 164100 166520 153610 173320 147100 177290 176790 197870 151790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 257640000 12715 3937 12023 24375 19569 19569 1 9606 Homo sapiens 0.022574983804247495 IDVDAPDIDIHGPDAK Unmodified 1689.821 0.82097959 3815 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 3 0 1 53.975 54.027 3 2.4483E-08 15929 20230619_1882_Aki_TMTPro18x_K_F3 134.85 121.98 62462 36457 41784 40432 40416 54880 56113 56819 67896 71592 72619 83846 80261 66127 86064 85286 82229 100440 57495 33465 44156 40723 42660 54422 56026 58280 68708 71916 74723 83930 81927 69838 87203 86239 78839 95167 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176880000 12716 3815 12024 24376 19570 19570 1 9606 Homo sapiens 0.003661936389789844 IDVDTEDVGDER Unmodified 1361.5947 0.59466805 2375 Q5SZR4;B3KPI5;B4DZR8;Q9Y2W6-3;Q9Y2W6;E9PKN8;B7ZAG4 TDRKH Tudor and KH domain-containing protein yes no 0 0 0 1 0 1 45.993 45.993 2 1.613E-23 12704 20230619_1880_Aki_TMTPro18x_K_F1 300.62 254.29 63959 46792 55366 84237 85940 102300 102950 100660 132160 95647 116290 133410 110120 102390 107250 122610 131670 138710 59036 43147 57635 82118 87416 101940 103620 102820 132180 98139 119900 132660 112550 107660 110540 123740 125790 131550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127070000 12717 2375 12025 24377 19571 19571 1 9606 Homo sapiens -0.07166550200076927 IDVEDILCK Unmodified 1103.5533 0.55326092 2120 A8K8E1;Q8TC07-2;Q8TC07-3;Q8TC07;Q9NSR4 TBC1D15;DKFZp761D0223 TBC1 domain family member 15 yes no 0 0 0 5 0 1 62.408 62.455 3 0.058385 19010 20230619_1885_Aki_TMTPro18x_K_F5 55.064 31.077 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12718 2120 12026 24378 19572 19572 1 9606 Homo sapiens 0.005626422975410605 IDVIDWLVFDPAQR Unmodified 1685.8777 0.8777066 3671 P57740;P57740-2;B3KMK0;P57740-3 NUP107 Nuclear pore complex protein Nup107 yes no 0 0 0 7.5 0.5 1 1 67.058 67.079 3 0.00083637 20941 20230619_1887_Aki_TMTPro18x_K_F7 83.729 72.624 6464.3 3664.8 5251.4 4635.2 5428.6 7405.1 4989.3 6545.4 6218.9 5480.3 6037.9 7189.7 6368.5 5869.2 5766.3 6030.8 6171.4 6127.3 5956.6 3368.8 5434.9 4638.8 5630 7252.6 5100.2 6710.7 6257.9 5647.9 6225.4 7173 6463.7 6102.6 5897.8 6063.9 5900.6 5818.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19252000 12719 3671 12027 24379;24380 19573 19573 1 9606 Homo sapiens 0.062202859861827164 IDVLDPEELK Unmodified 1169.618 0.61796967 1963 Q9P0N4;A6NDF3;Q9BVG4 PBDC1 Protein PBDC1 yes no 0 0 0 3.5 0.5 1 1 61.709 61.725 3 0.0015504 19137 20230619_1882_Aki_TMTPro18x_K_F3 89.171 55.946 48558 32030 37367 51888 38658 47719 48458 50644 59320 68588 61651 74227 78505 54688 61322 75038 69909 80809 44760 29506 39006 50670 40398 48601 48626 52021 59982 68493 63953 74380 78691 58196 63210 75354 66880 76651 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67093000 12720 1963 12028 24381;24382 19574 19574 1 9606 Homo sapiens 0.03994540375197175 IDVLLQQIEELGSEGK Unmodified 1769.9411 0.94109472 3127 Q86Y74;J3KPP4;O95232;Q6PKC2;A8K3C5;B4DJ96 CROP;LUC7L3 Luc7-like protein 3 yes no 0 0 0 7 0 1 67.309 67.331 3 0.013946 21057 20230619_1887_Aki_TMTPro18x_K_F7 59.862 49.228 1044.9 2331.7 2148 3026.7 2331.4 3048.6 2674.3 2586.8 2746.6 2381.4 3068.6 3530.3 4731.3 3494.2 3112.9 4193.1 3820.6 7495.4 985.02 2135.3 2099.6 2997.4 2416.3 3069 2678.9 2671.4 2806.4 2454.2 3208 3532.9 4695.6 3650.5 3240.1 4381.5 3674.1 7070.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5920900 12721 3127 12029 24383 19575 19575 1 9606 Homo sapiens 0.08692181912761043 IDVSVAAGHTDR Unmodified 1239.6208 0.62076364 835 Q4V328-4;A0A994J436;A0A994J4V9;A0A994J6P1;A0A087WXA6;A0A994J489;A0A994J4J8;A0A994J472;A0A994J4U4;A0A994J4F7;A0A994J6V9;A8K7Z3;A0A994J7B3;A0A994J484;A0A994J6U6;A0A994J720;A0A994J4V2;A0A994J488;A0A994J783;Q4V328;A0A087WW92;A0A994J745;A0A994J4N3;A0A994J4H0;A0A994J6Q0;A0A994J4E1;A0A087WT45;A0A994J6M6;A0A994J3X9;A0A994J467;A0A994J4D1 GRIPAP1 GRIP1-associated protein 1 yes no 0 0 0 4 0 1 39.424 39.466 3 3.8421E-05 9328 20230619_1883_Aki_TMTPro18x_K_F4 119.25 96.72 32697 34116 41801 37783 44265 47686 48626 43776 56355 50983 51850 44809 54913 49951 52826 43742 52599 56882 30356 31243 41724 38007 45870 47394 49003 45183 56789 50983 53503 45945 55866 51049 53690 44827 50358 53872 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51331000 12722 835 12030 24384 19576 19576 1 9606 Homo sapiens 0.010538085527059593 IDYCHLIEK Unmodified 1189.5801 0.58014438 1367 A7E2X7;A0AV47;A0A2R8YD63;Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes no 0 0 0 6.5 0.5 1 1 52.316 52.391 3 0.0022749 14956 20230619_1886_Aki_TMTPro18x_K_F6 88.681 69.549 59725 48461 57502 59522 54822 61067 58046 57959 77368 55092 56492 50945 61569 46378 57567 63083 61817 60418 55206 44461 58564 59229 57286 61566 58938 59359 76830 55757 59128 51799 62460 48905 58872 62957 59095 57419 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66631000 12723 1367 12031 24385;24386 19577 19577 1 9606 Homo sapiens -0.007062490912858266 IDYGEYMDK Unmodified 1132.4747 0.47467625 1034 A0A0G2JLD8;E7EUY5;Q567R6;A4D1U3;B7Z268;Q04837 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial yes no 0 0 0 4 0 1 54.511 54.526 3 0.0050352 16034 20230619_1883_Aki_TMTPro18x_K_F4 65.347 49.775 81372 62297 74969 84116 84509 131930 81127 82885 186630 88464 82740 88457 81269 82559 84269 108610 98783 109880 75163 57225 76930 83701 87493 128520 85146 88190 179690 89410 89721 89622 83307 86679 86580 108720 94452 104320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113740000 12724 1034 12032 24387 19578 19578 1 9606 Homo sapiens -0.08626210007560076 IDYIAGLDSR Unmodified 1121.5717 0.57168818 3401 P07741;P07741-2;H3BQB1;H3BQF1 APRT Adenine phosphoribosyltransferase yes no 0 0 0 5 0.816 1 1 1 56.055 56.104 2 7.1924E-06 16276 20230619_1885_Aki_TMTPro18x_K_F5 190.02 166.59 899240 712380 793860 773790 681220 861820 842920 846500 907660 1046500 992820 936650 1042700 860150 1001900 1126400 936920 1002900 830530 652880 813500 778020 721960 864460 842880 871010 925170 1043300 1016600 953550 1060300 903940 1016700 1120400 897520 953590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1067099999.9999999 12725 3401 12033 24388;24389;24390 19579;19580;19581 19580 3 9606 Homo sapiens 0.0157652026375672 IDYNVEQSCIK Unmodified 1367.6391 0.63911582 2655 O14662;O14662-5;O14662-4;O14662-2;O14662-6;H3BU86;Q59G13;B4E3U3;B7ZBM8;B4DJX9 STX16;STX16-NPEPL1 Syntaxin-16 yes no 0 0 0 5 0 1 51.034 51.109 2 0.019524 14227 20230619_1885_Aki_TMTPro18x_K_F5 84.17 57.055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12726 2655 12034 24391 19582 19582 1 9606 Homo sapiens -0.02999817587601683 IDYPPEFHQRPGYLK Unmodified 1858.9366 0.93661847 4382 Q96MU7;Q96MU7-2;J3QR07 YTHDC1 YTH domain-containing protein 1 yes no 0 0 1 1 0 1 48.7 48.7 4 3.0278E-05 13876 20230619_1880_Aki_TMTPro18x_K_F1 111.3 92.703 24790 26016 32370 32002 30209 25711 29863 29282 33871 31979 39073 35589 41061 29252 35559 43577 41112 41396 23021 23849 32205 31756 31460 26586 30275 29757 34478 32280 39903 35792 41546 31161 36607 43410 39284 39340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38962000 12727 4382 12035 24392 19583 19583 1 9606 Homo sapiens 0.0415076228050566 IEADSESQEDIIR Unmodified 1503.7053 0.70528113 1991 B1PL87;A8ASI8;B3KT21;P55957;P55957-2 BID BH3-interacting domain death agonist;BH3-interacting domain death agonist p15;BH3-interacting domain death agonist p13;BH3-interacting domain death agonist p11 yes no 0 0 0 1.5 0.5 1 1 46.717 46.756 2 2.2752E-07 13135 20230619_1880_Aki_TMTPro18x_K_F1 153.95 128.51 20750 13861 15063 20948 15243 21646 21230 22414 26184 27404 24494 24313 27568 22432 24036 31331 29239 30435 19121 12757 15822 20566 16039 21832 21207 22973 26340 27332 25342 24766 27871 23680 24831 31267 27934 28912 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 312960000 12728 1991 12036 24393;24394 19584 19584 1 9606 Homo sapiens -0.026423302118473657 IEAEEAIK Unmodified 901.47566 0.47566253 1058;3893;945 Q96J71;Q14576;Q14576-2;P26378-4;A0A494C0F8;P26378;P26378-3;P26378-1;P26378-5;P26378-2;A0A494C147;B1APY9;A0A494C1D9;A0A0R4J2E6;B7Z5E0;A0A494C015;A0A494C173;A0A0A0MRX1;Q12926-2;Q12926;B1AM48;C9JB16 ELAVL3;ELAVL4;ELAVL2 ELAV-like protein;ELAV-like protein 3;ELAV-like protein 4;ELAV-like protein 2 no no 0 0 0 2.5 0.5 1 1 47.136 47.214 2 0.003949 13169 20230619_1881_Aki_TMTPro18x_K_F2 127.56 60.883 160980 180000 252000 201150 247510 178480 243650 169160 175310 187660 215140 97683 112070 73209 361850 72615 75896 69729 149900 164820 247930 201300 256120 182360 243810 174200 184040 185880 214070 102620 129010 76490 346190 73770 75338 66282 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168320000 12729 3893;1058;945 12037 24395;24396 19585 19585 1 9606 Homo sapiens 0.020983724236771195 IEAINQAIANEYEVR Unmodified 1731.8792 0.87916317 3120 I6L9E8;Q8NCA5;A0A8I5KR56;A0A8I5QKV5;A0A8I5KZA5;E9PH82;B4DY25;B4DT23 FAM98A Protein FAM98A yes no 0 0 0 4.5 0.5 1 1 61.179 61.206 3 0.00076694 18432 20230619_1885_Aki_TMTPro18x_K_F5 79.471 66.335 74071 63885 68774 103310 82559 109340 104290 86299 94680 86001 101930 80290 94648 60008 99475 99379 92311 101420 68474 58785 70767 101030 85350 109470 103530 89836 97223 86778 103810 81211 96902 64761 100680 99331 88454 96275 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180370000 12730 3120 12038 24397;24398 19586 19586 1 9606 Homo sapiens 0.04249875284267546 IEALEQENSELER Unmodified 1558.7475 0.74748029 2857 Q3V6T2;D6W5D1;Q3V6T2-2;A0A2U3TZV9;A0A2R8Y7B1;Q3V6T2-3;Q3V6T2-4;Q3V6T2-5;A0A2R8YG73;A0A2R8Y4X4;A0A2R8Y4W8;A0A2R8YGU1;O14997;Q9UI01;Q6DCA5;A0A2R8YG52 CCDC88A;KIAA1212 Girdin yes no 0 0 0 1 0 1 52.762 52.762 2 3.378E-07 15489 20230619_1880_Aki_TMTPro18x_K_F1 146.16 102.36 43063 31460 35860 40820 31957 44638 39442 38218 40274 45004 47911 46365 50942 45215 45222 61205 48450 55715 39738 28892 37009 40492 33792 44675 39375 39679 41305 45161 48920 47010 51635 47507 46357 60891 46375 52950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109020000 12731 2857 12039 24399 19587 19587 1 9606 Homo sapiens -0.009543548034571359 IEANEALVK Unmodified 985.54441 0.5444108 3529 P30049 ATP5D ATP synthase subunit delta, mitochondrial yes yes 0 0 0 4.5 0.5 2 2 49.182 49.239 2;3 0.00082099 13588 20230619_1883_Aki_TMTPro18x_K_F4 102.07 55.176 176470 148000 162510 167550 185820 201340 199970 192280 227660 203690 221100 218220 230910 190870 202830 256170 249350 228700 163100 135660 166640 168100 191570 200870 201630 197360 230040 205740 227550 220070 234040 201210 209600 254680 237990 217590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1377000000 12732 3529 12040 24400;24401;24402;24403 19588;19589 19588 2 9606 Homo sapiens 0.05106036723384477 IEAPWAR Unmodified 841.44464 0.44463717 4587 Q9NRX2;E9PKV2 MRPL17 39S ribosomal protein L17, mitochondrial yes no 0 0 0 7.5 0.5 1 1 50.104 50.183 2 0.04529 13630 20230619_1887_Aki_TMTPro18x_K_F7 88.35 62.127 113490 97373 92817 104140 119070 136020 119260 122510 154370 125780 129220 129120 136740 119610 130040 136970 141410 134430 104810 89202 96480 105060 121750 134840 121280 126130 154220 127120 134100 130620 139050 124600 133010 137220 135140 127730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113130000 12733 4587 12041 24404;24405 19590 19590 1 9606 Homo sapiens 0.01757263900083217 IEAVEMHLTR Unmodified 1197.6176 0.61759251 4678 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 5 0 1 47.674 47.75 3 0.00037964 12778 20230619_1885_Aki_TMTPro18x_K_F5 98.353 62.473 49171 41435 50945 49744 42758 49338 46889 43751 47524 44091 42130 38002 42409 35869 48492 42400 46674 48411 45489 38002 51470 49558 45177 49797 47079 45114 48169 44368 43488 38796 43563 37438 49069 42858 44687 45911 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26193000 12734 4678 12042 24406 19591 19591 1 9606 Homo sapiens 0.026688421743529034 IECDDKGDGSCDVR Unmodified 1624.6457 0.64573411 3484;3886 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q14315;Q14315-2 FLNA;FLNC Filamin-A;Filamin-C no no 0 0 1 2 0.816 1 1 1 37.8 37.832 3 1.4885E-08 9124 20230619_1880_Aki_TMTPro18x_K_F1 165.78 150.28 395280 200400 385300 434680 671700 725250 600610 605100 665830 515500 687740 709980 677700 570650 637980 326200 704290 646040 364560 185690 396930 422910 673020 708030 611470 623850 674910 531990 704330 706540 689980 580720 651260 350780 672820 610440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 490850000 12735 3484;3886 12043 24407;24408;24409 19592;19593;19594 19592 3 9606 Homo sapiens -0.14160292489191306 IECSHIR Unmodified 913.44399 0.44398525 4722 Q9Y3C1;D6RIC3;A0A0C4DGU5;Q9Y3C1-3;Q9Y3C1-2;B4E098;D6RC60 NOP16 Nucleolar protein 16 yes no 0 0 0 5 0.816 1 1 1 30.995 31.053 3 0.0013853 6050 20230619_1885_Aki_TMTPro18x_K_F5 145.04 98.619 129060 74734 151820 146570 180400 185280 165310 169300 180330 118640 147590 139370 145660 126180 138910 80801 179520 134050 119300 69079 152720 142510 184550 183940 168050 172690 181360 123360 152850 140050 148460 128260 143250 85127 171050 126930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129330000 12736 4722 12044 24410;24411;24412 19595;19596 19596 2 9606 Homo sapiens -0.016198988112705592 IEDETQVSR Unmodified 1075.5146 0.51456723 512 E9PGW7;Q5T8T7;E7EN96;Q5T8T8;A0A024R8C5;Q15528-2;Q15528;Q5T8T6 MED22;SURF5 Mediator of RNA polymerase II transcription subunit 22 yes no 0 0 0 1 0 1 37.274 37.274 2 0.051721 8920 20230619_1880_Aki_TMTPro18x_K_F1 66.962 43.909 14818 10239 15924 16272 24445 23078 19908 19679 25887 16895 21186 30168 26229 21944 31160 19248 28238 25526 13697 9427.4 16210 16015 24570 22742 20513 20268 25825 17643 22257 29708 26840 22763 31368 19780 27027 24188 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19461000 12737 512 12045 24413 19597 19597 1 9606 Homo sapiens -0.02016947012612036 IEDFLER Unmodified 920.46035 0.46034682 299 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 RPS9 40S ribosomal protein S9 yes no 0 0 0 4 1.41 1 1 1 1 1 57.302 57.339 2 0.003113 17339 20230619_1882_Aki_TMTPro18x_K_F3 157.21 88.81 1725600 1319900 1557800 1622300 1466000 1686900 1717200 1696000 1821800 2058000 1665900 1706700 2114500 1602400 1715000 2275200 2035000 2047900 1593600 1211300 1595500 1614700 1537600 1701100 1720400 1741600 1846300 2049300 1736400 1745300 2124000 1693000 1771700 2261000 1944000 1947500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3253999999.9999995 12738 299 12046 24414;24415;24416;24417;24418 19598;19599 19599 2 9606 Homo sapiens -0.003064943735239467 IEDFLERR Unmodified 1076.5615 0.56145784 299 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 RPS9 40S ribosomal protein S9 yes no 0 0 1 4.5 0.5 1 1 51.209 51.261 3 0.00033322 14287 20230619_1885_Aki_TMTPro18x_K_F5 133.98 59.554 184680 216850 189820 160750 186080 158090 185350 205240 162680 181530 176830 139880 178860 142120 181280 210450 178520 154070 171270 197930 192090 167330 193080 161530 186410 205670 167740 183330 180670 144240 182510 150140 184300 207150 170670 147020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139720000 12739 299 12047 24419;24420 19600;19601 19601 2 9606 Homo sapiens 0.02623957329183213 IEDGNDFGVAIQEK Unmodified 1533.7311 0.73110195 892 Q86SZ7;Q2TNB3;A0A087X1Z3;Q9UL46;H0YM70;Q6FHK9;H0YKU2 PSME2 Proteasome activator complex subunit 2 yes no 0 0 0 3 0 1 56.631 56.667 3 1.1881E-08 17044 20230619_1882_Aki_TMTPro18x_K_F3 151.56 124.93 149050 108560 116830 129550 115420 131980 156210 152110 177900 142850 141050 149850 170920 147530 116570 212680 197380 221150 137480 99617 121440 129180 121220 133730 155750 153770 178440 145140 147760 151880 171050 155710 124490 212820 188230 209870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 274710000 12740 892 12048 24421 19602;19603 19602 2 9606 Homo sapiens -0.014414359695592793 IEDGNNFGVAVQEK Unmodified 1518.7314 0.7314363 1053 A0A384NQ35;A0A0K0K1L8;Q06323-3;Q06323;Q06323-2;Q6FHU3;Q86SZ9;H0YLU2 PSME1 Proteasome activator complex subunit 1 yes no 0 0 0 4 0.816 1 1 1 52.743 52.794 3 9.934E-08 15238 20230619_1883_Aki_TMTPro18x_K_F4 143.93 115.16 333160 242410 316030 297250 317030 370850 376110 363670 430860 385830 376270 428050 377230 376420 447340 446110 470280 499490 307720 222500 322420 296750 331050 369180 377440 372570 433590 390120 389230 430770 388780 393490 454920 450180 449940 473740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 389540000 12741 1053 12049 24422;24423;24424 19604;19605 19605 2 9606 Homo sapiens -0.007180162497206766 IEDHLDEAIHVLR Unmodified 1558.8104 0.81035532 3458 Q6PJU3;P15923;U5LXR9;X6REB3;P15923-2;P15923-3;A0A4Y5R8X2;K7ENH8 TCF3 Transcription factor E2-alpha yes no 0 0 0 3 0 1 52.316 52.382 4 2.3465E-15 15231 20230619_1882_Aki_TMTPro18x_K_F3 163.51 144.11 20324 21768 21655 23258 21787 26121 25324 21127 25821 25735 20792 20797 17635 15343 28136 18597 28413 21240 18840 19927 21903 23407 22721 26088 25334 22065 26089 25614 21456 21130 18607 16188 28384 18814 27133 20172 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41140000 12742 3458 12050 24425 19606 19606 1 9606 Homo sapiens 0.05330255775220394 IEDLEEGQQVIR Unmodified 1427.7256 0.72562264 3873 Q14008-2;Q14008;Q14008-3;Q8IYN5 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 1.5 0.5 1 1 52.904 52.921 2 2.1357E-17 15539 20230619_1880_Aki_TMTPro18x_K_F1 263.11 207.74 151690 126740 147120 156660 131540 151050 153520 146600 171420 192110 183070 197820 220470 177910 184610 233640 210270 231210 140250 116270 149650 155690 138510 153070 154120 151340 174250 191860 189000 199890 222070 187170 190050 233600 201080 219550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158060000 12743 3873 12051 24426;24427 19607;19608 19607 2 9606 Homo sapiens 0.02886885238604009 IEDLSQQAQLAAAEK Unmodified 1613.8261 0.82606496 648 F8VZJ2;A0A7I2V2K5;A0A024RB41;H0YHX9;A0A7I2V473;Q13765;E9PAV3-2;E9PAV3;F8W0W4;F8VNW4;B4DDI8 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 0 0 4 1.41 1 1 1 1 1 57.652 57.688 3 2.5788999999999996E-19 16917 20230619_1885_Aki_TMTPro18x_K_F5 213.52 147.03 565790 459060 493480 558370 474850 594720 545970 514150 614350 643810 602740 532740 642590 539520 529600 703590 617600 632210 522590 421130 507490 556120 497410 596670 548500 534400 621880 640460 620130 546460 649220 565050 546360 699890 590160 601180 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 5407500000 12744 648 12052 24428;24429;24430;24431;24432 19609;19610;19611;19612 19612 4 9606 Homo sapiens 0.04370497501645332 IEDSFSVK Unmodified 923.46001 0.46001246 2788 CON__P41361 yes yes 0 0 0 4.5 0.5 1 1 52.258 52.331 2 0.00010866 14745 20230619_1885_Aki_TMTPro18x_K_F5 179.21 108.94 + 30920 29385 35854 43149 51203 63233 41890 37336 79099 151970 311510 510100 156090 232760 291910 172320 252460 363520 28657 26998 36294 42652 51839 61820 44071 43203 87540 157990 303360 491120 171210 245510 291660 185260 242700 342840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77995000 12745 2788 12053 24433;24434 19613;19614 19614 2 -0.004779140933692361 IEDSTGLNRPGPAPLSSR Unmodified 1865.9595 0.95953875 3072 H3BQ53;Q9BQ70;Q9H7D3;H3BSP8;H3BS87;H3BMJ8;H3BTU3 TCF25 Transcription factor 25 yes no 0 0 1 6.5 0.5 1 1 43.259 43.345 3 3.1377E-30 10622 20230619_1887_Aki_TMTPro18x_K_F7 227.57 193.57 119380 104600 115020 127940 122450 134930 126910 130320 139080 148450 163180 153760 154390 135440 162860 141150 160300 159100 110400 95936 117390 127370 126730 135820 128130 133940 141990 149190 165880 155230 158250 140630 165190 142850 153390 150930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116900000 12746 3072 12054 24435;24436 19615;19616 19616 2 9606 Homo sapiens 0.06119736607320192 IEDVGSDEEDDSGK Unmodified 1493.6005 0.60054128 751;4018 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 0 0 0 1 0 1 45.802 45.802 3 5.2713E-05 12668 20230619_1880_Aki_TMTPro18x_K_F1 98.592 88.396 17492 12931 18919 16705 17997 24766 20692 17572 26320 21159 24500 29806 25398 23938 22988 23657 33760 33926 16175 11874 19080 16663 18882 24251 20875 18554 26402 21474 25296 29643 25808 24871 24015 24350 32198 32113 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60607000 12747 751;4018 12055 24437 19617 19617 1 9606 Homo sapiens -0.12651496479088564 IEDVPAPSTSADKVESLDVDSEAK Unmodified 2501.2021 0.20207303 3605 P49321;Q53H03;Q6PJY7;P49321-2;Q5T626;Q5T624;O95138;E9PI86 NASP Nuclear autoantigenic sperm protein yes no 0 0 1 3 0 1 55.936 55.977 4 2.2344E-05 16785 20230619_1882_Aki_TMTPro18x_K_F3 92.426 76.92 22259 16333 18429 25943 18333 23284 20901 20765 26607 26522 28096 39354 35236 34173 24240 41818 39195 54209 20539 15035 19086 25348 19163 23671 21104 21562 26851 26890 29132 39174 35259 35818 25770 42531 37461 51302 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118310000 12748 3605 12056 24438 19618 19618 1 9606 Homo sapiens 0.011520075206590263 IEDVTPIPSDSTR Unmodified 1428.7096 0.70963822 1363 A0A2R8Y811;P62263 RPS14 40S ribosomal protein S14 yes no 0 0 0 2.75 0.829 2 1 1 50.835 50.884 2 2.5136E-56 14780 20230619_1881_Aki_TMTPro18x_K_F2 325.08 273.65 516630 397540 441120 526340 487610 578940 558830 536110 636270 626360 617380 605200 704490 574150 541910 729620 650150 649340 476950 365090 455690 521450 505280 580290 561610 553130 643250 627670 637900 614520 708430 601530 560930 725680 621000 617600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2502200000 12749 1363 12057 24439;24440;24441;24442 19619;19620;19621;19622 19619 4 9606 Homo sapiens 0.012431790017217281 IEDVTPIPSDSTRR Unmodified 1584.8107 0.81074925 1363 A0A2R8Y811;P62263 RPS14 40S ribosomal protein S14 yes no 0 0 1 4.5 0.5 1 1 45.368 45.428 3 6.3849E-17 11920 20230619_1883_Aki_TMTPro18x_K_F4 214.14 175.56 85312 85305 124160 99588 155740 145050 143090 147690 126990 102900 129770 125800 129120 113990 184600 75052 128740 125770 79292 78169 123210 100080 158530 143340 144560 149430 130330 107100 133120 126230 134380 115970 183030 79261 123700 118930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70068000 12750 1363 12058 24443;24444 19623 19623 1 9606 Homo sapiens 0.04173630704417519 IEEACEIYAR Unmodified 1252.5758 0.57578728 109 A0A024R0R9;P54920;M0R0Y2;M0R2M1 NAPA Alpha-soluble NSF attachment protein yes no 0 0 0 2.5 0.5 1 1 48.076 48.151 2 0.00047275 13306 20230619_1882_Aki_TMTPro18x_K_F3 123.86 83.508 286850 226400 287580 310940 382890 427080 394620 378430 499640 431250 387940 379510 464310 381730 383380 473550 453850 431130 265190 207980 293720 308460 390640 421830 400210 391240 498670 431710 406510 387800 467640 398610 395650 471780 433400 410020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 323300000 12751 109 12059 24445;24446 19624;19625 19625 2 9606 Homo sapiens -0.04039758304861607 IEEALMDPGRQPESADDFDR Unmodified 2290.0172 0.017189567 1532 A0A3B3IUD7;Q14690 PDCD11 Protein RRP5 homolog yes no 0 0 1 2 0 1 55.036 55.057 3 7.5181E-16 16595 20230619_1881_Aki_TMTPro18x_K_F2 148.69 127.38 30401 27259 30915 34334 26966 31918 33855 30400 36103 35606 36399 35402 41110 35464 39300 38798 42358 43199 28132 25007 31327 34058 28518 32422 33806 31323 36669 35708 37539 35957 41727 36765 40160 39185 40504 40981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35962000 12752 1532 12060 24447 19626 19626 1 9606 Homo sapiens -0.07621834040037356 IEEEEQEPEPPEPFEYIDD Unmodified 2332.9747 0.97469885 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V641;A0A7I2V479 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 1 0 1 64.2 64.2 3 3.46E-07 20200 20230619_1880_Aki_TMTPro18x_K_F1 103.39 100.2 32364 21447 28357 37548 23453 39953 34136 36254 38894 46424 39830 42254 52036 39068 45380 50886 47901 51665 29860 19778 29142 36585 25160 40071 33954 37559 39443 46236 41375 42970 52369 41063 46432 50971 45833 49050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139440000 12753 832 12061 24448 19627 19627 1 9606 Homo sapiens -0.13846950687320714 IEEELGDEAR Unmodified 1159.5357 0.5356966 3418 Q6FHV6;P09104;A8K3B0;P09104-2;F5H0C8 ENO2 Gamma-enolase;Enolase yes no 0 0 0 1 0 1 46.096 46.096 2 5.3507E-19 12724 20230619_1880_Aki_TMTPro18x_K_F1 244.68 143.27 553900 420370 455420 508270 381320 374990 459570 464700 557220 565790 713560 806670 657580 625240 681260 719700 807610 791890 511190 385720 469910 504490 404070 391620 462160 471600 568090 573500 723010 801620 674560 655500 699510 725690 771380 751440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 856610000 12754 3418 12062 24449 19628 19628 1 9606 Homo sapiens -0.03768981703751706 IEEELGSK Unmodified 903.45493 0.45492709 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2;A4QMW8 ENO1 Alpha-enolase;Enolase yes no 0 0 0 2.62 1.32 2 2 2 1 1 48.321 48.373 2;3 0.00054522 13682 20230619_1880_Aki_TMTPro18x_K_F1 120.87 72.445 1292100 666850 1445000 1408500 1974300 2063000 1542700 1836700 1851400 1450500 2157400 2827700 1684000 2346600 1410300 987260 2377300 2210500 1193200 617540 1462600 1368700 1996400 2029800 1591300 1881000 1878700 1529100 2182200 2787100 1727600 2361000 1489600 1084800 2264000 2087200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 11386000000 12755 293 12063 24450;24451;24452;24453;24454;24455;24456;24457 19629;19630;19631 19629 3 9606 Homo sapiens -0.0006621795597538949 IEEFLEEVLCPPK Unmodified 1601.8011 0.80109577 2612 B4DWC4;Q6FIC5;Q9Y696;B3KTR3;Q9NVF8 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 0 0 6.5 0.5 1 1 67.312 67.344 3 0.001083 21269 20230619_1886_Aki_TMTPro18x_K_F6 84.289 69.024 3783.9 2021.9 1655.4 2822.2 2098.7 1780.9 2523.7 2038.4 4000.1 2348.7 3657.2 3132.6 3169.5 3619.5 3681.8 4319.4 3563.1 4412.3 3475 1861.2 1871.5 2768.7 2160.6 1887.1 2562.5 2077.2 3968.6 2386.2 3744 3167.7 3281.2 3749.9 3732.4 4332.5 3416.2 4186.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3085600 12756 2612 12064 24458;24459 19632 19632 1 9606 Homo sapiens 0.024267263746878598 IEEGERPDR Unmodified 1099.5258 0.52580062 1782 A0A8I5KZ07;Q5JR04;A0A8I5KXC3;Q9HCE1-2;Q9HCE1;Q9H8T8;B7Z700 MOV10 Putative helicase MOV-10 yes no 0 0 1 1 0 1 30.21 30.21 3 3.3226E-06 6069 20230619_1880_Aki_TMTPro18x_K_F1 176.38 141.57 29124 16581 37868 45197 94222 95404 72565 82793 78035 40680 58728 62842 58130 49951 54016 22888 59544 55908 26946 15422 38642 43864 92729 92302 74547 84244 78307 44099 61172 62311 59159 50555 55123 25397 56893 52765 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30854000 12757 1782 12065 24460 19633 19633 1 9606 Homo sapiens -0.0199812491848661 IEEGHIGVYYR Unmodified 1334.6619 0.66190017 1421 E5RHW4;A0A384ME54;O94905;O94905-2;O94905-3 ERLIN2 Erlin-2 yes no 0 0 0 4.5 0.5 1 1 44.196 44.257 3 1.6494E-09 11318 20230619_1885_Aki_TMTPro18x_K_F5 187.99 153.46 181440 133900 179400 180150 210140 191520 189930 211570 245090 161730 169800 152000 177120 139910 185990 162770 175780 161530 167650 123010 182800 178310 215070 193320 194410 213350 243350 165950 178000 154460 180910 145990 188270 163230 168180 153490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 216830000 12758 1421 12066 24461;24462 19634;19635 19635 2 9606 Homo sapiens 0.007955695921964434 IEEGLDQINK Unmodified 1157.5928 0.59281755 591 H3BR99;H3BNE1;H3BR18;H3BM38;H3BPJ0;H3BV99;H3BP15;H3BQY9;A0A024R9R8;A8K287;O00161-2;O00161 SNAP23 Synaptosomal-associated protein;Synaptosomal-associated protein 23 yes no 0 0 0 4 0 1 52.279 52.303 2 5.5942E-07 15038 20230619_1883_Aki_TMTPro18x_K_F4 163.94 106.35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12759 591 12067 24463 19636 19636 1 9606 Homo sapiens 0.02032485572613041 IEEGTYGVVYR Unmodified 1284.635 0.63501672 1016 A0A0D9SEN2;P21127-3;A0A0D9SER5;A0A0D9SEI3;B4E3D9;P21127-2;P21127-8;P21127;Q9UQ88-3;Q9UQ88-4;Q9UQ88-2;P21127-9;P21127-6;Q5QPR3;Q9UQ88;Q5QPR4;P21127-12;A4VCI5;Q6P5Y5;P21127-4;P21127-10;P21127-5;Q96CA8;Q4VBY6;B4E0M9;B4E0N4;Q9UQ88-5;Q9UQ88-10;Q9UQ88-9 CDK11B;CDK11A;CDC2L1;CDC2L2 Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A yes no 0 0 0 4.5 0.5 1 1 49.169 49.226 2 3.2686E-12 13596 20230619_1883_Aki_TMTPro18x_K_F4 210.6 176.52 86569 66522 75302 91603 87566 97249 91527 89739 103700 119310 108850 112000 132130 105520 97337 129380 123060 124830 79931 61118 77716 90476 90134 97726 92431 92992 105300 118760 112440 113800 132430 110360 101190 129280 117500 118610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173650000 12760 1016 12068 24464;24465 19637 19637 1 9606 Homo sapiens 0.004084609809979156 IEELQLIVNDK Unmodified 1312.7238 0.72383172 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8;Q59GS3;J3QSA9;J3KRP2;J3QQM1;J3QRR3;J3QLH6;A0A994J6H0;J3QSE0;A0A994J3X6 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 4.5 0.5 1 1 62.856 62.883 3 0.0028381 19201 20230619_1885_Aki_TMTPro18x_K_F5 72.958 50.76 59776 49447 57581 66741 65393 84962 65182 66572 79393 66433 70984 75105 76425 70422 77793 88318 84297 84535 55260 45407 58863 66177 67428 84059 66176 69278 79717 67461 73509 75728 77945 73706 79499 88223 80594 80331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122050000 12761 1202 12069 24466;24467 19638 19638 1 9606 Homo sapiens 0.07997876220656508 IEEMLENAER Unmodified 1232.5707 0.5707019 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2;Q05D78 MRE11A Double-strand break repair protein MRE11A yes no 0 0 0 2 0 1 58.076 58.091 2 0.0047728 17845 20230619_1881_Aki_TMTPro18x_K_F2 90.827 61.354 58275 52281 53126 61618 45251 67320 60411 66320 72995 77939 74941 77056 82025 72595 67684 88631 85734 98161 53878 47929 54353 61537 48199 67580 60444 68110 73761 78112 77109 78121 82846 75890 70194 89271 81941 93087 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122490000 12762 229 12070 24468 19639 19639 1 9606 Homo sapiens -0.03628062167445023 IEEMLENAERER Unmodified 1517.7144 0.71440603 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2;Q05D78 MRE11A Double-strand break repair protein MRE11A yes no 0 0 1 2 0 1 55.036 55.057 3 0.028394 16637 20230619_1881_Aki_TMTPro18x_K_F2 59.038 43.466 24471 21682 24103 22601 28222 27971 26844 25939 36452 22841 26121 24353 25036 22754 30529 30711 29451 27440 22636 19856 24564 22835 28943 27848 27435 26557 36134 23329 27239 24630 25864 23932 30889 30552 28175 26104 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64904000 12763 229 12071 24469 19640 19640 1 9606 Homo sapiens -0.023742601272033426 IEESIDR Unmodified 860.42396 0.42396131 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 1.5 0.5 1 1 39.841 39.876 2 1.1779E-05 10003 20230619_1880_Aki_TMTPro18x_K_F1 200.12 115.76 290050 137240 304200 322140 355160 398950 314560 329860 364420 296690 438670 455450 414390 379930 376060 203940 480040 406160 267600 127400 308690 310720 363870 395610 321250 340940 371000 306600 445580 452190 422070 385170 387780 219750 457780 383900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 302030000 12764 3892 12072 24470;24471 19641 19641 1 9606 Homo sapiens -0.011833712702355115 IEEVLSGVLDTELR Unmodified 1571.8407 0.8406524 3474 P18583-5;P18583-9;P18583;P18583-7;P18583-4;P18583-3;P18583-10;P18583-6;P18583-2;A0A994J4Y9;A0A8Q3SI10;Q6ZRV7;J3QSZ5;D3DSF7;A0JLP4;Q3SWV4;P18583-8 SON Protein SON yes no 0 0 0 5 0 1 65.594 65.638 3 0.001417 20433 20230619_1885_Aki_TMTPro18x_K_F5 73.834 50.955 5563.2 3211.7 5795.5 5058 4440.2 4391.1 5737.4 3694.4 3345.3 5050.6 6588.9 5156.9 6229 6055.3 6269.3 6025.8 5176.9 5734.3 5136.4 2959.4 5842.4 4947 4742.4 4475.4 5637.7 3867.6 3675.7 5034.1 6584.8 5267.7 6371.9 6211.3 6313.1 6041.8 4967.6 5447.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28368000 12765 3474 12073 24472 19642 19642 1 9606 Homo sapiens 0.07760569649781246 IEEVPELPLVVEDK Unmodified 1607.8658 0.86580451 3558 Q59GY2;P36578;H3BM89;B4DMJ2;Q53G74;B4DFI6 RPL4 60S ribosomal protein L4 yes no 0 0 0 3 0.816 1 1 1 63.199 63.214 3 2.272E-09 20054 20230619_1881_Aki_TMTPro18x_K_F2 166.48 142.87 135460 101570 113440 145790 100010 156490 126120 139600 146870 181590 165470 197970 219810 197500 126430 286220 242550 316200 125030 93373 117120 143630 106090 156880 126360 144890 149420 181750 171370 200310 218380 208450 137530 287310 231450 299740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2295500000 12766 3558 12074 24473;24474;24475 19643;19644 19643 2 9606 Homo sapiens 0.08618624452287804 IEEVSDTSSLQPQASLK Unmodified 1830.9211 0.92108756 4522 Q9H6T3-3;Q9H6T3-2;Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes no 0 0 0 4 0 1 54.521 54.537 3 5.2972E-07 16019 20230619_1883_Aki_TMTPro18x_K_F4 122.12 95.968 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12767 4522 12075 24476 19645 19645 1 9606 Homo sapiens 0.03886386182171009 IEFPLPDEK Unmodified 1086.5597 0.55972651 3706 Q53XL8;Q53HB3;P62191;P62191-2 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 4 0 1 60.437 60.439 3 0.066035 18500 20230619_1883_Aki_TMTPro18x_K_F4 45.598 29.024 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12768 3706 12076 24477 19646 19646 1 9606 Homo sapiens 0.019909035205728287 IEFTFER Unmodified 940.46543 0.46543219 1171 O43747-2;O43747;B3KXW5;A0A140VJE7;Q8IY97;B3KNW1 AP1G1 AP-1 complex subunit gamma-1 yes no 0 0 0 4.5 0.5 1 1 55.295 55.333 2 0.059596 16349 20230619_1883_Aki_TMTPro18x_K_F4 81.89 48.152 196440 162120 181400 201370 183080 228700 218120 209390 252420 219230 218790 220320 235260 212180 234830 251930 247480 258160 181540 148750 185720 200470 191250 228670 218910 215540 253800 221180 226850 223400 239680 221210 239600 252830 236740 245100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113580000 12769 1171 12077 24478;24479 19647;19648 19647 2 9606 Homo sapiens -0.007181905109064246 IEFYELDKK Unmodified 1183.6125 0.61249036 1098 O15305;A0A291FGD1;A0A0S2Z4J6;B2R6D4;H3BV55;Q59F02;B7Z419;B7Z6A1;A0A804HKA7;H3BPH4 PMM2 Phosphomannomutase 2;Phosphomannomutase yes no 0 0 1 7 0 1 55.076 55.137 3 0.0026374 15810 20230619_1887_Aki_TMTPro18x_K_F7 88.681 58.622 154070 84866 131640 174170 136990 142020 180330 160400 165280 166690 190720 195890 206700 163570 153300 204150 183330 174860 142010 78523 135940 167940 142930 146350 178800 162920 170220 168970 195170 196500 207830 171910 158760 202730 175060 166420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155970000 12770 1098 12078 24480 19649 19649 1 9606 Homo sapiens 0.028028615833591175 IEGCHICTSVTPGEPQVFLGK Unmodified 2328.1242 0.1242376 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 0 0 7.5 0.5 1 1 56.271 56.328 3 1.8954E-11 16284 20230619_1887_Aki_TMTPro18x_K_F7 124.63 109.21 78878 60769 65523 86489 55080 69241 57112 66837 71147 75188 74996 79917 92972 82853 61797 109160 108530 123810 72807 55853 67631 84951 58223 71236 57969 68699 71893 75690 77544 81073 92917 86773 66233 109920 103490 117390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 393350000 12771 4170 12079 24481;24482 19650;19651 19650 2 9606 Homo sapiens 0.013300446405992261 IEGDETSTEAATR Unmodified 1378.6212 0.62121715 2758 C9JLU1;P52434;P52434-4;P52434-3 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes no 0 0 0 1 0 1 36.706 36.706 2 1.8537E-17 8639 20230619_1880_Aki_TMTPro18x_K_F1 218.55 183.11 124440 61493 154530 146320 176770 224900 156510 171120 174840 139880 180410 188460 196200 166690 160170 87696 215110 186970 115010 57083 154780 141640 181480 219950 159650 177630 177200 144620 185560 188190 198050 168620 166090 95224 205090 176630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 257420000 12772 2758 12080 24483 19652 19652 1 9606 Homo sapiens -0.05294861308766485 IEGDMIVCAAYAHELPK Oxidation (M) 1931.9121 0.91211956 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9;A0A2R8Y4A2;Q9BUV4;Q5T7N0 RPL5 60S ribosomal protein L5 yes no 0 1 0 4 0.707 1 2 1 55.026 55.066 3 1.6424E-06 15846 20230619_1885_Aki_TMTPro18x_K_F5 109.24 93.301 209340 173930 186690 240020 211880 215670 223510 232020 198480 264270 231490 230120 250790 231290 213980 304680 260110 273940 193420 159760 192210 236540 218210 220330 223990 236780 205340 264160 236800 235290 253750 242340 221300 303000 248520 260460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220420000 12773 1916 12081 24484;24485;24486;24487 19653;19654 19654 1230 2 9606 Homo sapiens -0.016560019795406333 IEGDMIVCAAYAHELPK Unmodified 1915.9172 0.91720493 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9;A0A2R8Y4A2;Q9BUV4;Q5T7N0 RPL5 60S ribosomal protein L5 yes no 0 0 0 6.25 0.968 2 3 2 1 58.854 58.91 3;4 9.4327E-14 17459 20230619_1885_Aki_TMTPro18x_K_F5 161.32 131.98 535860 453290 534040 519730 440650 533890 570240 519660 566980 637230 531940 561510 710090 528870 534320 687020 680510 686120 495580 415530 541230 519830 468800 538510 567420 535150 577110 635300 555360 572290 710360 555460 555310 687310 649730 651670 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1918699999.9999998 12774 1916 12081 24488;24489;24490;24491;24492;24493;24494;24495 19655;19656;19657;19658;19659 19656 5 9606 Homo sapiens -0.00411698116909065 IEGDPQGVQQAK Unmodified 1268.6361 0.63607935 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;Q6ZS03;Q96CF6 HDLBP Vigilin yes no 0 0 0 3.5 0.5 1 1 42.231 42.284 3 5.0096E-06 10559 20230619_1883_Aki_TMTPro18x_K_F4 113.38 96.012 42425 37785 52930 50413 53367 63201 52241 54350 72758 47537 70127 63977 67820 51663 49099 47083 70945 67269 39331 34685 52888 50037 55410 62713 53392 55955 72733 48963 71892 63804 68375 53505 51445 48528 67643 63692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193300000 12775 292 12082 24496;24497 19660 19660 1 9606 Homo sapiens 0.012506753499110346 IEGFEVLK Unmodified 933.51713 0.51713341 1237 A0A140VK83;Q15435;Q15435-3;C9J177;Q15435-2;C9JRC4;C9JD73;Q15435-5;Q15435-4;H7C118 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 0 6 0 1 59.898 59.96 2 0.0043444 18103 20230619_1886_Aki_TMTPro18x_K_F6 116.73 56.873 114130 84779 96320 127410 87628 122310 114200 108960 136640 140120 141740 165800 171340 150060 145490 187090 182690 227570 105330 77983 99420 124990 92696 123650 114290 113140 138180 140740 146640 166600 172780 157310 150700 189530 174750 215560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54977000 12776 1237 12083 24498 19661 19661 1 9606 Homo sapiens 0.047715531829908286 IEGFEVLKK Unmodified 1061.6121 0.61209643 1237 A0A140VK83;Q15435;Q15435-3;C9J177;Q15435-2;C9JRC4;C9JD73;Q15435-5;Q15435-4;H7C118 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 1 1 0 1 55.349 55.349 3 0.015512 16560 20230619_1880_Aki_TMTPro18x_K_F1 60.102 34.164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12777 1237 12084 24499 19662 19662 1 9606 Homo sapiens 0.08375486654176711 IEGLAPK Unmodified 726.42759 0.42759012 2995 F8W8Z9;Q8N4H5;Q8N4H5-3;Q8N4H5-2 TOMM5 Mitochondrial import receptor subunit TOM5 homolog yes no 0 0 0 7 0.816 1 1 1 48.411 48.488 2 0.0079671 12874 20230619_1887_Aki_TMTPro18x_K_F7 121.29 41.839 402190 302770 378250 431160 446830 500950 494070 477650 670690 492370 590780 565840 616480 489470 504610 518930 593810 528600 371530 278310 387660 425600 460360 500570 500640 490020 669350 499470 610670 568610 622880 509100 520050 521600 566840 502210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 257240000 12778 2995 12085 24500;24501;24502 19663 19663 1 9606 Homo sapiens 0.053433432942824766 IEGLLAAFPK Unmodified 1057.6172 0.61718181 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;Q6P1Q5;E9PK34 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 0 3 0 1 63.856 63.886 3 0.027307 20086 20230619_1882_Aki_TMTPro18x_K_F3 57.492 38.877 15319 13168 16342 16501 15991 20069 17568 18406 20667 16854 20294 16591 18941 17820 19845 18621 17838 18767 14177 12081 16514 16437 16699 19977 17724 18873 20845 17121 20758 16917 19425 18377 20047 18715 17093 17820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50938000 12779 2181 12086 24503 19664 19664 1 9606 Homo sapiens 0.09067790516814966 IEGLQNLVNLR Unmodified 1267.7248 0.72483478 1237 A0A140VK83;Q15435;Q15435-3;C9J177;Q15435-2;B5MBZ8;C9JD73;Q15435-5;Q15435-4;H7C003 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 0 3 0 1 62.002 62.031 2 0.002635 19234 20230619_1882_Aki_TMTPro18x_K_F3 99.864 74.692 46301 36891 39739 44765 41134 45799 49405 50955 54596 46423 46058 47936 49828 42104 50767 48672 52285 54016 42756 33845 40970 44583 42857 46351 49492 51574 54968 47209 47851 48397 50783 43983 51678 49113 50023 51242 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90527000 12780 1237 12087 24504 19665 19665 1 9606 Homo sapiens 0.10168135380217791 IEGVYAR Unmodified 806.42865 0.42865276 2764 C9K025;P18077;F8WBS5;F8WB72 RPL35A 60S ribosomal protein L35a yes no 0 0 0 6 0.816 1 1 1 41.662 41.746 2 0.006446 10233 20230619_1886_Aki_TMTPro18x_K_F6 132.96 87.987 1371500 937750 1045500 1156900 1315600 1374700 1423000 1345800 1617500 1427800 1332600 1220200 1604000 1296100 1019100 1699300 1837300 1482900 1264400 861000 1093900 1153200 1348400 1373100 1433900 1378900 1625700 1432900 1391100 1251900 1601300 1356000 1095300 1686900 1747600 1412000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3328399999.9999995 12781 2764 12088 24505;24506;24507 19666;19667 19667 2 9606 Homo sapiens 0.017695576631808763 IEGYEDQVLITEHGDLGNSR Unmodified 2244.0659 0.065854319 3638 P52907;A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 yes no 0 0 0 2 0.816 1 1 1 53.896 53.923 3 1.0796E-79 15904 20230619_1882_Aki_TMTPro18x_K_F3 317.01 293.78 153080 129820 140840 156000 139430 167860 165280 164010 176010 210230 191130 202510 217680 170870 187240 233230 212940 232000 141490 119060 144190 155550 145760 168740 165510 169050 179530 209680 196620 204840 219790 180680 192610 233150 203620 220300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 703330000 12782 3638 12089 24508;24509;24510 19668;19669;19670;19671 19670 4 9606 Homo sapiens -0.006415974086394272 IEHLIGK Unmodified 808.48069 0.48068833 633 Q53GJ1;Q9H4E3;A0A024RAS3;Q9H0S4-2;Q9H0S4;Q7Z4B1 E4-DBP;hCG_27698;DDX47;MST162 Probable ATP-dependent RNA helicase DDX47 yes no 0 0 0 1 0 1 48.299 48.299 3 0.0036619 13681 20230619_1880_Aki_TMTPro18x_K_F1 114.6 73.573 88639 50176 71192 85016 93999 88162 89094 87949 101410 109710 114290 103630 113440 87418 90622 127070 115590 110460 81671 46285 74176 82971 95634 88903 90497 90446 103190 109510 116510 105000 114680 92829 94133 126020 110320 105110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88852000 12783 633 12090 24511 19672 19672 1 9606 Homo sapiens 0.06878721076952843 IEHSFWR Unmodified 973.477 0.47699993 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;A0A7P0TB30;B4DSA8;B4DZP5;Q16531-2 DDB1 DNA damage-binding protein 1 yes no 0 0 0 5.75 2.77 1 2 1 44.014 44.048 3 0.00018776 11902 20230619_1880_Aki_TMTPro18x_K_F1 170.73 107.24 198210 125890 199270 188780 193430 223580 207980 207940 234280 210190 193480 167360 203370 166150 209750 201110 211500 194260 183030 115880 202190 185910 201860 222980 209710 213520 235580 211080 200750 171900 207520 173350 213220 201190 202220 184640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 225820000 12784 1710 12091 24512;24513;24514;24515 19673;19674;19675 19673 3 9606 Homo sapiens -0.010799486969062855 IEIEAVAIQGPLTTASL Unmodified 1724.956 0.95601651 574 A0A024R9H2;P52758;H0YBX3;H0YB34 HRSP12 Ribonuclease UK114 yes no 0 0 0 5.5 0.5 1 1 66.236 66.279 3 0.0038893 20860 20230619_1886_Aki_TMTPro18x_K_F6 68.944 53.678 8680.3 6007.7 6320.3 7681.7 5064.9 7386.7 6801.3 7517.8 8785.3 8075.6 8736.7 7386.3 7724.3 9102.5 7722.3 7913.7 7867.7 9806.2 8000.6 5517.7 6607.6 7614.9 5430.8 7489.7 6821.3 7685.2 8830.5 8115.2 8912.6 7592.1 7932.2 9263.2 7862.6 8078.3 7539.7 9286.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33057000 12785 574 12092 24516;24517 19676 19676 1 9606 Homo sapiens 0.12253673780764984 IEIHYAK Unmodified 872.4756 0.47560295 2052 B4DRG7;E9PHA2;A8K4T8;Q15003;Q15003-2;H7C415 NCAPH Condensin complex subunit 2 yes no 0 0 0 7.5 0.5 1 1 43.733 43.777 3 0.0067017 10845 20230619_1887_Aki_TMTPro18x_K_F7 100.19 49.222 43521 27737 35314 38258 40494 41290 43978 39831 57805 51396 56972 49764 56468 47628 41578 56270 56992 54826 40124 25505 36649 37804 41762 41493 44550 41111 58047 51301 58393 50552 56950 49661 43473 56285 54365 52097 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157990000 12786 2052 12093 24518;24519 19677 19677 1 9606 Homo sapiens 0.03426417214336652 IEISELNR Unmodified 972.52401 0.52400971 2778;2787 CON__P35908v2;CON__P35908;P35908;H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2;H6VRF9 KRT2;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1 no no 0 0 0 3.5 0.5 1 1 48.553 48.612 2 0.0066198 13337 20230619_1883_Aki_TMTPro18x_K_F4 110.03 33.127 + 85095 102390 79343 196060 2300500 193820 663560 144830 368100 87945 118370 106000 151120 857930 131370 116760 115140 131050 78872 94345 112150 189830 2150400 201550 752210 151490 383610 94311 134940 132290 157290 817670 132950 130750 110430 124260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 547980000 12787 2787;2778 12094 24520;24521 19678 19678 1 9606 Homo sapiens 0.03664866063570571 IELEEMGPSLDLVLR Unmodified 1712.9019 0.90187244 2112 A8K800;Q9H7B2;Q5VXN0;B4DWS5 RPF2 Ribosome production factor 2 homolog yes no 0 0 0 5 0 1 64.523 64.568 2 2.2216E-13 19971 20230619_1885_Aki_TMTPro18x_K_F5 206.36 139.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12788 2112 12095 24522 19679 19679 1 9606 Homo sapiens 0.0739375835755709 IELFADVVPK Unmodified 1129.6383 0.63831118 3257 Q6FH57;Q6FH36;O43447;C9JQD4;A0A7I2V5V0;A0A7I2V343;A0A7I2V2H6 PPIH Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase H yes no 0 0 0 7 0 1 63.249 63.281 3 0.0020278 19314 20230619_1887_Aki_TMTPro18x_K_F7 85.256 56.513 248940 209710 242780 282030 222360 270170 289960 264800 297580 303190 281970 288210 322500 277070 273750 340640 330120 358820 230180 192560 247130 278640 234540 273880 288630 272050 302230 303920 291860 292930 325630 289590 282710 342090 315510 340510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59116000 12789 3257 12096 24523 19680;19681 19680 2 9606 Homo sapiens 0.0786775582566861 IELFCTEYQNNK Unmodified 1557.7133 0.71334339 3026 R4GMW6;H0Y6Z9;R4GMX3;Q9UBI1;H0Y4E5 COMMD3-BMI1;COMMD3 COMM domain-containing protein 3 yes no 0 0 0 7 0 1 58.896 58.946 3 9.6178E-05 17369 20230619_1887_Aki_TMTPro18x_K_F7 111.63 99.654 263270 208690 248760 266290 184300 234650 281280 270250 145010 331760 325140 352880 403500 347190 292700 418550 386140 424870 243280 191550 253110 263820 199030 240430 274040 275360 163380 332180 328730 357120 404070 362090 305440 419420 368820 403340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 128590000 12790 3026 12097 24524 19682;19683 19682 2 9606 Homo sapiens -0.04320474496080351 IELGDVTPHNIK Unmodified 1334.7194 0.71941505 2895 E7EQ69;Q9GZZ1;C9J5D1;Q9GZZ1-2;C9JZU6;C9J5J3;A0A0D9SF32;F8WCK0 NAA50 N-alpha-acetyltransferase 50 yes no 0 0 0 6.5 0.5 1 1 50.648 50.727 3 7.3956E-05 14189 20230619_1886_Aki_TMTPro18x_K_F6 114.56 60.994 537600 455530 468610 500710 499200 560200 526380 511290 639300 543130 561220 538960 650320 492520 543450 685910 651010 615030 496690 417430 482410 502870 517240 560990 532620 526630 641640 547350 583170 546190 655560 520000 561210 681750 621590 585040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1188200000 12791 2895 12098 24525;24526 19684;19685;19686 19685 3 9606 Homo sapiens 0.0654441179776768 IELHGKPIEVEHSVPK Unmodified 1810.9941 0.99413335 3211 O00425;F8WD15 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes no 0 0 1 7.5 0.5 1 1 44.73 44.787 5 2.9715E-07 11230 20230619_1887_Aki_TMTPro18x_K_F7 121.19 103.49 142870 108450 125390 121510 116870 129700 153200 141500 145880 154850 150040 162610 176730 148720 153250 167070 146010 172640 131910 99435 128700 121830 123040 130830 152130 144120 149270 155980 155020 164210 178370 154860 155930 167880 139960 163820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 747250000 12792 3211 12099 24527;24528 19687 19687 1 9606 Homo sapiens 0.1210760448605015 IELLGSYDPQK Unmodified 1261.6554 0.65541781 3500 Q59EH3;P24666;P24666-3;P24666-2 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes no 0 0 0 6.75 0.829 2 1 1 59.509 59.562 2;3 3.2518E-06 17910 20230619_1886_Aki_TMTPro18x_K_F6 187.97 110.29 106780 82717 93502 110010 77598 108630 96804 95679 119650 122930 113990 127550 142980 124880 99086 169530 151910 178250 98600 75966 95970 108790 82627 109590 97221 99408 120450 122950 118530 129230 143010 131280 104840 169890 145010 169120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 366240000 12793 3500 12100 24529;24530;24531;24532 19688;19689 19688 2 9606 Homo sapiens 0.03505631640791762 IELPELFDR Unmodified 1130.5972 0.59717465 3046 H0YHS6;Q9Y2Z4 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial yes no 0 0 0 4.5 0.5 1 1 62.856 62.883 2 0.0015887 19560 20230619_1883_Aki_TMTPro18x_K_F4 114.39 76.093 33561 33799 34398 37320 36839 40345 41628 41095 43172 46472 47297 48045 48527 42854 51624 54806 44925 54587 31084 30955 34931 37453 38187 40597 41748 42074 44080 46716 48409 48539 49634 45002 52094 54862 43116 51814 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217750000 12794 3046 12101 24533;24534 19690 19690 1 9606 Homo sapiens 0.03709994786186144 IENFDVSFGDR Unmodified 1297.5939 0.59388018 1135 B4DRU9;A0A0S2Z5L1;Q9NUQ8-2;Q9NUQ8;A0A0S2Z645 ABCF3 ATP-binding cassette sub-family F member 3 yes no 0 0 0 4 0 1 58.088 58.092 2 0.0001967 17526 20230619_1883_Aki_TMTPro18x_K_F4 119.27 92.176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12795 1135 12102 24535 19691 19691 1 9606 Homo sapiens -0.04301300058477864 IENHEGVR Unmodified 952.47264 0.47264284 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;Q504U3;A0A024R609;H3BQ34;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 2 0.707 1 2 1 26.997 27.073 3 0.0007107 5248 20230619_1880_Aki_TMTPro18x_K_F1 111.06 71.019 86959 50352 104800 98477 158930 156600 116380 149430 122840 88509 138300 155750 107060 118460 138080 61684 162540 136150 80398 46540 105720 96192 159460 153700 120120 151400 125250 94759 139980 153670 111930 120360 140760 67344 155100 128630 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1757399999.9999998 12796 370;3451 12103 24536;24537;24538;24539 19692;19693;19694;19695 19692 4 9606 Homo sapiens -0.005494579104720287 IENVVLDANCSR Unmodified 1388.6718 0.67181293 2851 D6REB4;Q9H074-2;A0A024R094;Q9H074-3;Q9H074 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes no 0 0 0 4.5 0.5 1 1 52.142 52.191 2 1.7993E-06 14956 20230619_1883_Aki_TMTPro18x_K_F4 151.13 124.24 212740 169060 192040 218620 204180 245310 238840 229300 267210 260480 257920 278160 292220 240720 218630 308460 301740 340950 196520 155200 197190 217010 212260 245600 239650 236220 270310 262140 266620 280310 293690 253220 228700 310400 288170 323350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147030000 12797 2851 12104 24540;24541 19696;19697 19696 2 9606 Homo sapiens -0.0069761046474923205 IENVVLVVPVK Unmodified 1207.754 0.75400964 4578 Q9NQW7-4;Q9NQW7-3;Q5T6H7;B3KSI7;Q9NQW7-2;Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 2 0 1 62.472 62.481 3 0.0095445 19720 20230619_1881_Aki_TMTPro18x_K_F2 73.848 50.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12798 4578 12105 24542 19698 19698 1 9606 Homo sapiens 0.15844279676502993 IEPEPFENCLLRPGSPAR Unmodified 2081.0364 0.036408866 1344 B7Z514;A0A2R8Y5T7;B7Z1C5;A0A2R8Y430;V9HWJ1;P48637-2;P48637 HEL-S-64p;GSS Glutathione synthetase yes no 0 0 1 6 0 1 54.397 54.474 3 0.010901 15810 20230619_1886_Aki_TMTPro18x_K_F6 63.145 41.304 51590 55412 64592 64371 53304 74929 74665 64908 98629 101430 91579 100210 113990 88832 99705 104260 107870 121540 47897 50764 64396 64420 56957 74715 74757 67996 98891 100540 95327 101340 114900 92902 102110 105470 103230 115210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180230000 12799 1344 12106 24543 19699 19699 1 9606 Homo sapiens 0.039132118321504095 IEPGVDPDDTYNETPYEK Unmodified 2080.9113 0.91131074 4514 Q9H4A4;A6NKB8;Q7RU04;C9JMZ3 RNPEP Aminopeptidase B yes no 0 0 0 2 0.816 1 1 1 54.383 54.395 3 7.2021E-19 16327 20230619_1881_Aki_TMTPro18x_K_F2 183.31 167.89 81381 64209 71645 69669 59290 64666 63555 65049 68938 101920 101370 102190 117940 85188 89692 115240 101310 118410 75159 58847 73374 69890 62701 65823 64078 67418 71376 100960 103180 103150 118380 90106 92491 115420 96939 112370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214540000 12800 4514 12107 24544;24545;24546 19700;19701 19700 2 9606 Homo sapiens -0.08590846613878966 IEPIPGESPK Unmodified 1065.5706 0.57062555 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 0 4.5 0.5 1 1 48.507 48.564 2 0.0008737 13319 20230619_1883_Aki_TMTPro18x_K_F4 125.71 97.971 150380 123850 131780 136790 130770 149400 143040 136900 126920 200290 202430 215430 208710 171910 166740 243380 218320 205610 138920 113510 135430 137290 136270 149880 143110 142430 133530 199320 204470 216530 210790 182490 173560 241080 208300 195740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76344000 12801 817 12108 24547;24548 19702 19702 1 9606 Homo sapiens 0.04046305894848956 IEPPGLFR Unmodified 927.5178 0.51780212 2724 P11387;B9EG90;Q969P6;Q969P6-2;E5KMK7;E5KMK6;E5KMK5;B4DYD2;B7Z9E8;E5RIC7;D3DWJ7;E5RJ95;E5RFS0 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial yes no 0 0 0 1 0 1 54.437 54.437 2 0.0069938 16109 20230619_1880_Aki_TMTPro18x_K_F1 108.92 85.368 67309 59088 60300 63138 58797 66639 60658 59618 76180 75868 67344 63908 76614 65440 65439 76539 71878 73297 62213 54125 61827 63500 61300 66987 61544 61829 76424 75465 69885 65477 77376 68051 67157 76527 68720 69647 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109710000 12802 2724 12109 24549 19703 19703 1 9606 Homo sapiens 0.051143926227155134 IEPSVNFLK Unmodified 1045.5808 0.5807963 1479 A8K7T4;A0A384NPY7;Q12907;B4DWN1;A0A8Q3WK65;D6RBV2 LMAN2 Vesicular integral-membrane protein VIP36 yes no 0 0 0 5.67 3.3 1 2 58.714 58.735 2;3 7.6768E-05 18005 20230619_1880_Aki_TMTPro18x_K_F1 174.02 65.215 310070 248400 276210 309450 263630 345240 331040 311200 357290 344920 374450 395920 370070 332450 413000 403320 390610 451580 286420 227940 283510 307910 277130 345470 330670 321280 363110 348360 383490 397460 379960 348740 417950 406890 374370 428180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 299580000 12803 1479 12110 24550;24551;24552 19704;19705;19706 19704 3 9606 Homo sapiens 0.059829136200733046 IEQAMDLVK Unmodified 1045.5478 0.54778161 3294;780 O75157-2;O75157;Q5JRJ0;B4DN36;E7EWD5;B3KXT7;A0A8I5KT94;H7BZ77;B4DU81;H0Y865;B4DMB2;Q99576;Q9Y3Q8-2;Q99576-3;Q9Y3Q8;A8K3Y6;A0A024RDV8;Q15714-2;Q15714-3;Q15714 TSC22D2;TSC22D3;TSC22D4;TSC22D1 TSC22 domain family protein 2;TSC22 domain family protein 3;TSC22 domain family protein 4;TSC22 domain family protein 1 no no 0 0 0 6 0.816 1 1 1 59.511 59.565 2 0.00076737 17843 20230619_1886_Aki_TMTPro18x_K_F6 134.68 71.111 43889 33181 41517 40365 31499 45947 36892 37407 51731 48785 48916 57320 55526 49659 46682 61778 60186 66775 40546 30448 42221 40250 33780 45819 37365 39117 51750 48974 50656 57526 56074 52110 48456 62117 57501 63346 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115630000 12804 3294;780 12111 24553;24554;24555 19707 19707 1 9606 Homo sapiens 0.026829635057538326 IEQFVYSSPHDNK Unmodified 1562.7365 0.73652168 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 49.139 49.216 3 1.8113E-11 13543 20230619_1886_Aki_TMTPro18x_K_F6 189.33 160.7 132740 106660 114850 133500 120390 130330 132380 132330 117470 122920 132010 160110 149620 124260 147700 159140 158120 185590 122590 97880 118350 132560 124900 132080 132370 134850 121160 125800 135780 159610 152040 131230 150870 160790 151380 175890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274060000 12805 3609 12112 24556;24557 19708;19709 19708 2 9606 Homo sapiens -0.022337123870784126 IEQIQCYSAK Unmodified 1238.5965 0.59652272 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPW9;H7C3P6;A0A8V8TQG1;H0YCT1 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 7.5 0.5 1 1 49.863 49.94 3 0.032354 13469 20230619_1888_Aki_TMTPro18x_K_F8 54.259 41.427 123310 106460 129010 127760 129210 149710 140660 133450 169160 124150 111920 105070 121830 100370 107320 131260 119210 117060 114110 97625 130590 127580 134570 149330 142010 137220 168340 125510 117910 107440 123360 105340 110170 130540 113930 111340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98658000 12806 1852 12113 24558;24559 19710 19710 1 9606 Homo sapiens -0.013231679251930473 IEQLQNHENEDIYK Unmodified 1771.8377 0.83769228 3093 H7C4F6;O00629;A0A7I2YQ95;A0A7I2V340 KPNA4 Importin subunit alpha-3 yes no 0 0 0 3 0.816 1 1 1 47.036 47.096 3 3.022E-12 12814 20230619_1882_Aki_TMTPro18x_K_F3 189.1 108.63 461660 391190 455340 468230 454970 518810 479400 465660 530030 615050 630010 644910 695310 578020 546010 717050 672700 688430 426930 358750 463140 467240 473430 519620 483710 483440 541580 614400 644490 651110 700420 605820 565790 716240 642520 654120 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 372610000 12807 3093 12114 24560;24561;24562 19711;19712;19713;19714 19712 4 9606 Homo sapiens -0.01735305475062887 IEQLSPFPFDLLLK Unmodified 1658.9283 0.92834519 2470 Q02218;Q02218-2;E9PDF2;B4DF00;E9PCR7;B4DH65;B4E3E9;B4DK55;E9PFG7 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 2.5 0.5 1 1 67.256 67.279 3 0.0093129 21694 20230619_1881_Aki_TMTPro18x_K_F2 66.285 44.412 1330.3 2371.7 4121.8 4184.2 3200.5 5191.3 3678.1 4085.3 4273.2 4518.1 4295.2 3631.2 3366.5 4370.8 2713.1 2355.6 4406.5 4636.1 1260.5 2180.9 3943.8 4085.7 3416.1 5140.2 3702.9 4259.8 4321.6 4517.9 4359.2 3748.1 3445.9 4376.1 2861.7 2529.2 4201.3 4378.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4678200 12808 2470 12115 24563;24564 19715 19715 1 9606 Homo sapiens 0.12523815311169528 IEQVDKEDEITEK Unmodified 1574.7675 0.76754703 4712 Q9Y2X3;B3KN82 NOP58 Nucleolar protein 58 yes no 0 0 1 2.5 0.5 1 1 47.73 47.805 3 1.5014E-05 13150 20230619_1882_Aki_TMTPro18x_K_F3 120.3 86.124 313890 238200 267080 340480 252000 318060 285730 282710 371680 365550 392380 418040 428920 369410 338180 482420 472580 506540 289750 218960 275450 334920 264440 322360 288860 293650 374620 366680 403260 420450 432460 388630 353710 483850 451100 480740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 238190000 12809 4712 12116 24565;24566 19716;19717 19717 2 9606 Homo sapiens 0.003153961364660063 IESFVETLK Unmodified 1064.5754 0.57537657 3612 Q9BPX4;Q53XC2;P49770;G3V5E5;H0YJJ8 EIF2B2 Translation initiation factor eIF-2B subunit beta yes no 0 0 0 7 0 1 62.625 62.661 3 0.00020505 19022 20230619_1887_Aki_TMTPro18x_K_F7 105.94 58.738 123360 108070 110670 126060 100720 123710 115810 108230 141620 157470 149390 164150 181210 156540 113700 219970 212300 191440 114020 99073 113430 125800 105980 124930 116710 113010 143260 156730 154310 166140 180860 165020 122830 218090 202030 182210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146670000 12810 3612 12117 24567 19718 19718 1 9606 Homo sapiens 0.04567190037619184 IESGELDPER Unmodified 1143.5408 0.54078198 264 Q53GC2;A0A024R3U9;P20338;A0A087WYT5 RAB4A Ras-related protein Rab-4A no no 0 0 0 1 0 1 43.903 43.903 2 0.00019856 11817 20230619_1880_Aki_TMTPro18x_K_F1 137.95 93.604 84263 63434 74212 87373 80704 92261 87804 76938 106270 99234 113110 115900 113370 105020 95138 124970 138970 127090 77799 58286 76405 86286 83579 92555 88669 80317 107460 99649 115740 116560 114940 109690 99641 125290 132460 120730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110720000 12811 264 12118 24568 19719 19719 1 9606 Homo sapiens -0.025246778411201376 IESLMDEIEFLK Unmodified 1465.7374 0.73743288 2433 B3KWQ6;P41219;P41219-2;F8W835 PRPH Peripherin yes no 0 0 0 5 0 1 66.406 66.449 3 1.0452E-07 20756 20230619_1885_Aki_TMTPro18x_K_F5 166.14 154 14802 7587.7 8208.2 14726 8781.9 10444 9257.9 10496 19379 14872 16042 28351 20882 27472 13754 34607 31993 49642 13604 7017.2 8932.6 14206 9135.5 10876 9616.5 10852 19025 15224 16899 28130 20915 28715 15240 35426 30557 46926 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14194000 12812 2433 12119 24569 19720 19720 1 9606 Homo sapiens 0.023193659375692732 IESLSSQLSNLQK Unmodified 1445.7726 0.77257283 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 LMNB1 Lamin-B1 yes no 0 0 0 2 0 1 60.131 60.143 4 1.3686E-08 18694 20230619_1881_Aki_TMTPro18x_K_F2 167.71 143.64 46706 34328 40167 43256 35080 42328 35243 38280 40253 45848 44251 48368 53223 42327 43230 54997 46887 48547 43110 31515 41282 42935 36900 42775 35718 39595 40930 45997 45628 48781 53538 44532 44403 54670 44837 46172 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22579000 12813 3482 12120 24570 19721 19721 1 9606 Homo sapiens 0.06751744789767145 IESQTQEEVR Unmodified 1217.5888 0.58879481 3446 P13521;B4DQJ6 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 1 0 1 36.141 36.141 2 5.4609E-10 8417 20230619_1880_Aki_TMTPro18x_K_F1 240.78 194.02 35771 21633 47394 66556 37900 41843 66578 75859 72615 50836 91259 121190 81377 86087 79926 33566 98871 95844 33111 20172 47173 63116 40841 44866 65676 74522 74185 54819 92529 118450 83409 87137 82075 38239 94395 90384 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54717000 12814 3446 12121 24571 19722 19722 1 9606 Homo sapiens -0.011296039211174502 IESSLQEDEPENDAK Unmodified 1702.7534 0.75335353 4566 Q9NPL8;C9JU35 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes no 0 0 0 1 0 1 48.057 48.057 3 1.7571E-14 13565 20230619_1880_Aki_TMTPro18x_K_F1 188.4 180.31 33292 30359 32124 36954 41450 46706 39264 38857 47848 49730 54883 73810 57682 47223 50783 63848 61993 73477 30798 27839 32902 36894 42279 46310 39983 40539 48559 50392 56224 72873 58450 50468 52456 64387 59285 69644 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177910000 12815 4566 12122 24572 19723 19723 1 9606 Homo sapiens -0.0699130108243935 IETIEVMEDR Oxidation (M) 1249.586 0.58601761 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;Q65ZQ3;P51991-2;B4DDB6;B4E3E6 HNRNPA3;D10S102;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 1 0 1.5 0.5 1 1 47.397 47.435 2 2.1548E-05 13292 20230619_1880_Aki_TMTPro18x_K_F1 156.18 119.34 294990 230350 237670 313240 333230 327980 324810 319300 353580 345010 396910 413180 384570 342660 368280 433580 398730 450730 272260 211590 248060 309550 338170 330400 328830 327570 360290 349350 404790 414070 392220 360500 376850 435000 381570 427730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 812660000 12816 1469;2450 12123 24573;24574 19724;19725;19726 19724 973 3 9606 Homo sapiens -0.028791953702693718 IETIEVMEDR Unmodified 1233.5911 0.59110299 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;Q65ZQ3;P51991-2;B4DDB6;B4E3E6 HNRNPA3;D10S102;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 1.75 0.829 2 1 1 55.229 55.244 2;3 2.3679999999999996E-19 16690 20230619_1881_Aki_TMTPro18x_K_F2 257.27 209.61 637310 475070 562740 642860 534680 716070 639370 615010 667690 792200 790870 846480 931460 764970 812230 946010 888920 993180 588410 436450 578080 636110 561530 715810 639630 640160 684220 792660 812200 854070 940320 801560 833030 949960 850500 942440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5365900000 12817 1469;2450 12123 24575;24576;24577;24578 19727;19728 19728 2 9606 Homo sapiens -0.016348915076378034 IETLDPALIRPGR Unmodified 1449.8304 0.83036248 3706 Q53XL8;Q53HB3;P62191;P62191-2 PSMC1 26S protease regulatory subunit 4 yes no 0 0 1 4.5 3.5 1 1 52.955 52.992 3 1.741E-15 15582 20230619_1880_Aki_TMTPro18x_K_F1 202 144.14 852420 581590 733190 819880 740400 941380 861170 889060 997110 931510 919740 798700 943110 814130 847120 1131500 912600 966300 786480 534760 755530 809700 773160 940910 865570 912790 1005000 935370 947460 818420 957420 855920 868350 1121800 872910 919350 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1041699999.9999999 12818 3706 12124 24579;24580 19729;19730;19731 19729 3 9606 Homo sapiens 0.12344051505806419 IETMLGDVAVAVHPK Oxidation (M) 1594.8389 0.83887826 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;P26640-2 VARS Valine--tRNA ligase yes no 0 1 0 7 0 1 53.906 53.973 3 1.1318E-07 15322 20230619_1887_Aki_TMTPro18x_K_F7 123.1 102.72 287250 227500 247280 285760 307420 259500 305570 272800 314200 357820 401580 341880 366690 309510 379810 391960 411350 410410 265260 208790 255570 283450 313930 264970 308460 280190 323240 356500 406040 346950 375940 324780 387800 393550 393270 389620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 899230000 12819 725 12125 24581 19732 19732 439 1 9606 Homo sapiens 0.06525237360142455 IETMLGDVAVAVHPK Unmodified 1578.844 0.84396364 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;P26640-2 VARS Valine--tRNA ligase yes no 0 0 0 8 0 1 61.919 61.948 3 3.0552000000000003E-33 18596 20230619_1888_Aki_TMTPro18x_K_F8 248.68 202.89 404030 326380 383530 392360 297990 403600 410200 389690 429120 587380 521700 537540 599810 512450 546780 633310 577910 655420 373400 299390 390180 391050 319900 406840 407840 404370 440570 581280 534500 546990 607150 535950 559160 635440 553180 622000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202130000 12820 725 12125 24582 19733 19733 1 9606 Homo sapiens 0.07769541222751286 IETNENNLESAK Unmodified 1360.647 0.64703797 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 2.5 0.5 1 1 44.799 44.882 3 5.7297E-07 12082 20230619_1881_Aki_TMTPro18x_K_F2 123.2 108 185540 111430 164580 200740 219540 240710 240250 193340 291110 210250 247240 250420 229220 182710 222040 185060 257850 246990 171120 102850 170020 195670 224340 239150 242370 201420 291610 213000 254970 249970 234130 190960 227670 189530 246290 233980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220960000 12821 673 12126 24583;24584 19734;19735 19734 2 9606 Homo sapiens -0.01885967066482408 IETVISDEEVIK Unmodified 1373.729 0.72897668 4534 Q9H8H0;J3QLQ6;J3QR28 NOL11 Nucleolar protein 11 yes no 0 0 0 3 0 1 60.923 60.952 3 0.0016326 18810 20230619_1882_Aki_TMTPro18x_K_F3 69.216 54.244 39330 27977 38265 42238 32422 42560 43393 38159 47594 45455 45404 44443 53908 38739 41046 56554 45626 57050 36330 25741 38907 41466 34488 42880 43240 39508 48163 45527 47042 44997 54091 41129 42309 56517 43689 54139 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9195800 12822 4534 12127 24585 19736 19736 1 9606 Homo sapiens 0.057061352925984465 IEVASSVK Unmodified 831.47018 0.47018322 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 0 0 7 0 1 46.072 46.16 2 0.0060379 11808 20230619_1887_Aki_TMTPro18x_K_F7 111.74 15.83 273020 191310 232350 266350 286210 294840 275050 278020 357990 276260 356680 314730 345400 261760 296220 277690 388490 355410 251920 175860 240390 263090 292800 295590 280520 285170 359590 280630 365150 316110 350400 272870 307040 283210 370580 336870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215690000 12823 1076 12128 24586 19737 19737 1 9606 Homo sapiens 0.04770693631871836 IEVEKPFAIAK Unmodified 1243.7176 0.71762413 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 0 1 1 0 1 55.34 55.34 3 0.00010137 16530 20230619_1880_Aki_TMTPro18x_K_F1 123.64 80.011 272530 210990 253130 288500 266030 330260 322390 319250 330520 360240 340670 334730 356190 268480 377440 290830 265390 199230 251760 193830 259250 285440 277090 330370 322040 327960 336870 360990 349820 338530 363620 280330 376740 287180 254550 190450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1869799999.9999998 12824 1716 12129 24587 19738 19738 1 9606 Homo sapiens 0.10551402779788077 IEVEKPFAIAKE Unmodified 1372.7602 0.76021723 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 0 2 7.5 0.5 1 1 55.807 55.868 3 5.7391E-05 16084 20230619_1888_Aki_TMTPro18x_K_F8 127.36 106.05 503730 531780 642870 563260 615300 604600 692210 711380 493410 717970 717710 469840 477570 356890 915060 305790 340640 215430 467700 486790 640550 567420 641720 611110 687910 719180 523590 716810 714590 484420 514590 369490 887700 305240 330600 206030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1467699999.9999998 12825 1716 12130 24588;24589 19739 19739 1 9606 Homo sapiens 0.08874753117356704 IEVIDGK Unmodified 772.43307 0.43306943 3520 P29084;E5RH41 GTF2E2 Transcription initiation factor IIE subunit beta yes no 0 0 0 4 0 1 50.064 50.098 2 0.020831 14024 20230619_1883_Aki_TMTPro18x_K_F4 97.798 32.546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12826 3520 12131 24590 19740 19740 1 9606 Homo sapiens 0.03775022086108493 IEVIEIMTDR Oxidation (M) 1233.6275 0.6274885 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;A0A7I2YQX9;F8VZ49;Q32P51;A0A024QZ98;A0A2R8Y4L2;F8VTQ5;H0YH80;A0A7I2V5U9 HNRNPA1;HNRPA1;hCG_2020860;HNRNPA1L2;RP11-78J21.1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 1 0 2.5 0.5 1 1 54.355 54.39 2 0.00036862 16278 20230619_1881_Aki_TMTPro18x_K_F2 123.29 83.221 106510 81243 78314 122860 114270 105170 104430 107410 114730 102200 128920 117950 116570 98134 112710 125880 103910 130100 98234 74728 82679 120310 115500 107760 106190 109500 116810 104050 130990 118460 119140 103350 114280 126250 99683 123430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 835500000 12827 640 12132 24591;24592 19741 19741 380 1 9606 Homo sapiens 0.020019853890744344 IEVIEIMTDR Unmodified 1217.6326 0.63257388 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;A0A7I2YQX9;F8VZ49;Q32P51;A0A024QZ98;A0A2R8Y4L2;F8VTQ5;H0YH80;A0A7I2V5U9 HNRNPA1;HNRPA1;hCG_2020860;HNRNPA1L2;RP11-78J21.1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 3 1.41 1 1 1 1 1 62.738 62.756 2 1.6614E-09 19544 20230619_1882_Aki_TMTPro18x_K_F3 204.79 148.07 4794200 3739200 4274600 4641800 3637500 4563900 4453300 4551300 5078900 5209300 4892100 4847600 5414900 4652900 5225900 5870100 3559400 6056800 4427800 3431500 4378600 4612800 3856900 4619500 4463900 4668400 5133500 5218500 5051500 4932300 5498700 4871300 5230300 5887600 3439000 5741600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2946199999.9999995 12828 640 12132 24593;24594;24595;24596;24597 19742;19743;19744;19745 19743 4 9606 Homo sapiens 0.03246289251706003 IEVLQQHENEDIYK Unmodified 1756.8632 0.86317875 779 A0A024RDV7;O00505;Q53F09;H0Y4S9 KPNA3 Importin subunit alpha;Importin subunit alpha-4 yes no 0 0 0 3.5 0.5 1 1 50.914 50.965 3 2.194E-09 14409 20230619_1883_Aki_TMTPro18x_K_F4 166.6 148.19 98651 79104 90105 95904 90423 101630 97956 99353 93777 119330 124970 113480 122150 99984 113840 132770 120150 131600 91143 72568 92281 95559 94107 102290 98261 102180 97122 119290 126560 115070 124320 105340 116370 132760 114980 124970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235540000 12829 779 12133 24598;24599 19746 19746 1 9606 Homo sapiens 0.015021690473759008 IEVQDTSGGTTALRPSASTQALSSSVSSSK Unmodified 2951.4684 0.4683519 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DZP5 DDB1 DNA damage-binding protein 1 yes no 0 0 1 8 0 1 50.362 50.438 4 1.4079E-05 13692 20230619_1888_Aki_TMTPro18x_K_F8 75.301 58.964 20518 17737 20689 21458 20703 24388 20324 23477 23648 26578 25814 21942 30779 21989 25085 28774 24677 23936 18980 16267 21007 21406 21509 24416 20636 24115 24016 26549 26570 22507 30952 23057 25606 28527 23609 22789 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 653390000 12830 1710 12134 24600 19747 19747 1 9606 Homo sapiens 0.07067646292261998 IEVSQLLK Unmodified 928.55933 0.55933258 969 A0A2R8Y484;A0A0A1TSG4;Q08722-2;Q08722-3;Q08722-4;Q08722 CD47 Leukocyte surface antigen CD47 yes no 0 0 0 1 0 1 59.029 59.029 2 0.0006783 18098 20230619_1880_Aki_TMTPro18x_K_F1 158.56 69.264 422770 393160 420800 452740 409070 486310 466960 451520 518070 445690 450790 428770 499510 391030 451540 515760 485750 483520 391240 360310 427700 452830 427670 488420 469060 463620 522080 450400 467690 435040 505800 411340 462240 514300 464410 459600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1262900000 12831 969 12135 24601 19748;19749 19749 2 9606 Homo sapiens 0.09219528591381732 IEVVNFLVPNAVYDIVK Unmodified 1931.0768 0.076800343 1421 E5RHW4;A0A384ME54;O94905;E5RJ09;O94905-2;O94905-3 ERLIN2 Erlin-2 yes no 0 0 0 2 0 1 66.52 66.526 3 0.012325 21436 20230619_1881_Aki_TMTPro18x_K_F2 59.872 45.714 3062.7 2759.2 1963 2126.4 2597.4 2663.8 3277.4 3942.5 3498.3 1594.5 2446.4 5125 3798 3730.5 2963.3 4082.3 4220.7 4715.1 2825.4 2521.1 2096.6 2211.4 2666.8 2684.4 3271.2 3875.1 3502.6 1844.7 2637.2 4991 3799.4 3907.6 3103.5 4129 4029.6 4469.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1584500 12832 1421 12136 24602 19750 19750 1 9606 Homo sapiens 0.14850501494242963 IEYAKPTR Unmodified 976.53418 0.53418046 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;M0R1W6;B4DPK8;B4DVF8;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 0 1 3.67 3.09 1 1 1 39.352 39.37 3 0.0069647 9772 20230619_1880_Aki_TMTPro18x_K_F1 90.64 59.904 667670 630110 791010 707510 1071800 839930 955960 855940 718310 710780 872230 441870 466240 279630 1062900 214870 279560 139570 618910 577300 796630 710400 1084100 840740 963310 869430 751140 717530 868200 455990 515130 291050 1022400 215690 274080 133880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1005999999.9999999 12833 1455;1520 12137 24603;24604;24605 19751;19752;19753 19751 3 9606 Homo sapiens 0.04497473788808293 IEYARPTR Unmodified 1004.5403 0.54032847 1144 C9IYN3;A8K894;V9GYK2;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9-4;Q8WVV9;A0A0S2Z610;Q8WVV9-3;Q8WVV9-2;H7BXH8 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 0 0 1 5.33 3.09 1 1 1 33.622 33.648 3 0.0025238 7427 20230619_1880_Aki_TMTPro18x_K_F1 98.582 65.69 160190 117600 156610 168950 218600 212920 195690 210450 222380 184900 210330 217650 207830 187320 182170 215330 257140 215330 148000 108120 160360 166920 221340 211910 199480 214410 224480 189270 216290 218490 211140 195630 189990 215860 245020 204670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 192830000 12834 1144 12138 24606;24607;24608 19754;19755 19754 2 9606 Homo sapiens 0.038239920203295696 IEYDCELVPR Unmodified 1292.6071 0.60708741 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 3.2 0.748 1 2 2 52.615 52.655 2;3 2.4999E-05 15337 20230619_1882_Aki_TMTPro18x_K_F3 143.61 109.08 260280 218770 233590 259750 233380 254460 261450 236200 250950 291480 295880 274590 332620 252950 279920 322480 303300 340270 240510 200620 239660 258890 243150 257370 261700 244170 258280 291040 302920 278910 335570 265520 287100 323790 290230 322870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1512499999.9999998 12835 617 12139 24609;24610;24611;24612;24613 19756;19757;19758 19757 3 9606 Homo sapiens -0.027511852707675644 IEYDTFGELK Unmodified 1213.5867 0.58666954 3406 P07954-2;A0A804HI24;A0A0S2Z4C3;P07954;A0A804HKE6;A0A0S2Z3S9;A0A0S2Z3W2;A0A0S2Z3X6;A0A0S2Z4H0 FH Fumarate hydratase, mitochondrial yes no 0 0 0 4 0.816 1 1 1 59.717 59.745 3 0.00012198 17806 20230619_1885_Aki_TMTPro18x_K_F5 125.97 98.348 162050 137590 134170 173360 151150 169300 176360 174810 195950 195570 200290 200430 217740 185690 189850 235520 200940 223700 149660 126250 139120 172030 156430 171620 176950 178790 198730 196680 206050 202830 220340 194650 194420 235080 192310 212510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 388290000 12836 3406 12140 24614;24615;24616 19759;19760 19760 2 9606 Homo sapiens -0.011580326589182732 IEYEPFRK Unmodified 1080.5604 0.56039521 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 1 8 0 1 47.639 47.697 3 0.023731 12548 20230619_1888_Aki_TMTPro18x_K_F8 59.368 29.601 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12837 1002 12141 24617 19761 19761 1 9606 Homo sapiens 0.023337429602634074 IEYIHSK Unmodified 888.47052 0.47051757 2398;544 Q5U045;Q53EZ1;B3KRV2;P49674;H0Y645;B0QY35;B0QY34;A0A669KBC0;J3QQI9;B0QY36;H0Y2N6;B4E0G1;A0A024R8X3;H7BYT1;P48730-2;P48730;B4DIJ9;Q59FJ7 CSNK1E;CSNK1D Casein kinase I isoform epsilon;Casein kinase I isoform delta no no 0 0 0 7 0 1 41.738 41.809 3 0.0026766 9989 20230619_1887_Aki_TMTPro18x_K_F7 119.27 41.6 128390 89739 105290 133400 135870 159990 136280 140960 174860 156740 177470 159010 187160 152280 142960 178740 193890 173960 118430 82555 109520 131380 138920 159250 138560 145720 176010 157710 182190 161200 188600 158730 149140 178830 184880 165350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92841000 12838 2398;544 12142 24618 19762 19762 1 9606 Homo sapiens 0.02182113351705084 IEYQFFEDR Unmodified 1245.5666 0.5666028 2154 A8KAK1;Q9NYU2-2;Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 3.5 0.5 1 1 58.509 58.525 2 3.4147E-05 17823 20230619_1882_Aki_TMTPro18x_K_F3 166.34 112.13 143020 114510 131250 140040 135800 156440 148020 158890 165600 163630 166080 183040 178180 165370 178410 180340 183420 210570 132140 105060 134440 139560 141110 156990 149130 162250 167770 165690 171060 184290 181580 171940 181710 182680 175630 199580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132170000 12839 2154 12143 24619;24620 19763 19763 1 9606 Homo sapiens -0.04635783598860144 IEYVDETGR Unmodified 1080.5088 0.50875357 3252 O43290;B4DDH9 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 0 1 0 1 44.48 44.48 2 0.010757 12065 20230619_1880_Aki_TMTPro18x_K_F1 82.287 69.25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12840 3252 12144 24621 19764 19764 1 9606 Homo sapiens -0.028280455242793323 IEYVDETGRK Unmodified 1208.6037 0.60371659 3252 O43290;B4DDH9 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 1 4 0 1 42.664 42.708 3 0.00047343 10702 20230619_1883_Aki_TMTPro18x_K_F4 102.55 69.324 98847 68740 80955 98211 107820 121360 109310 107100 151870 121180 144330 153750 161120 135520 118790 194780 193870 173980 91179 63209 84244 97000 110050 120600 111390 110790 151900 122800 149170 154110 161990 143470 126090 193370 184630 165540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106230000 12841 3252 12145 24622 19765 19765 1 9606 Homo sapiens 0.007758879469065505 IEYVHTK Unmodified 888.47052 0.47051757 1563 P48729-2;P48729;U3KPX3;A0A590UJ43;V9HW00;P48729-3;A0A5F9W493;Q6PJ06;B4DER9;Q05DL3;B4E1D9;E7ETM0;D6REM4;A0A590UK94;Q8N752 CSNK1A1;HEL-S-77p;CSNK1A1L Casein kinase I isoform alpha;Casein kinase I isoform alpha-like yes no 0 0 0 6.5 0.5 1 1 40.075 40.154 3 0.0014547 9280 20230619_1887_Aki_TMTPro18x_K_F7 143.12 61.337 115670 77917 99668 111060 139090 131490 131320 127930 171770 133600 139260 120590 165830 133730 116140 119860 161550 127900 106710 71656 103220 109670 141070 131350 134040 131070 171340 134450 145370 123480 166030 136850 121470 121150 153890 121520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167440000 12842 1563 12146 24623;24624 19766 19766 1 9606 Homo sapiens 0.02182113351705084 IEYVTVTPEGFR Unmodified 1409.7191 0.7190807 4147 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 yes no 0 0 0 6 0 1 58.437 58.502 3 0.0014567 17519 20230619_1886_Aki_TMTPro18x_K_F6 69.641 57.08 19407 14973 19931 19455 15860 19743 21052 20810 23088 17865 19869 18184 24737 16300 24202 20961 22564 23451 17943 13748 20143 19287 16951 19958 20993 21110 23259 18230 20746 18399 25033 17151 24510 21137 21611 22244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17484000 12843 4147 12147 24625 19767 19767 1 9606 Homo sapiens 0.03060992077894298 IFANTESYLK Unmodified 1184.6077 0.60773933 133 A0A024R179;Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes no 0 0 0 1 0 1 59.03 59.03 2 0.0001185 18118 20230619_1880_Aki_TMTPro18x_K_F1 157.24 98.263 82798 64028 83548 80823 80092 96614 90765 88877 101990 94731 86707 85665 86229 65133 94764 99704 92401 95576 76541 58770 84752 80460 83819 96295 91251 91477 102670 95153 89686 86698 88379 69736 96112 99384 88454 90810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 261930000 12844 133 12148 24626 19768 19768 1 9606 Homo sapiens 0.022819774406116267 IFANTPDSGCVLGMR Oxidation (M) 1652.7651 0.76506139 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162;Q7KYX9;A0A0S2Z4A8;Q7Z683 PFKM;DKFZp779O048 ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 1 0 1 0 1 54.469 54.469 3 0.032201 16209 20230619_1880_Aki_TMTPro18x_K_F1 45.614 30.348 86753 124600 112480 116050 121050 123020 151120 104230 86007 101220 104080 70902 64397 58081 186110 71855 97442 74568 80794 113850 112300 118070 125500 123570 148530 107850 92055 101500 104260 72995 72697 61089 181570 72505 93931 70880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182210000 12845 116 12149 24627 19769 19769 47 1 9606 Homo sapiens -0.0352105407387171 IFANTPDSGCVLGMR Unmodified 1636.7701 0.77014677 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162;Q7KYX9;A0A0S2Z4A8;Q7Z683 PFKM;DKFZp779O048 ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 1.5 0.5 1 1 59.011 59.018 2 4.285000000000001E-25 18227 20230619_1881_Aki_TMTPro18x_K_F2 236.11 197.76 144770 117180 132090 139130 94289 126640 126800 128050 134330 140630 123640 126360 140070 123500 143290 170510 156470 152140 133760 107480 134720 138570 102010 129010 126270 131090 136080 141000 128150 128890 142650 129940 146530 169470 149550 144710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 179630000 12846 116 12149 24628;24629 19770;19771;19772 19771 3 9606 Homo sapiens -0.022767502112401417 IFAPNHVVAK Unmodified 1094.6237 0.62366417 3788 Q02543;M0R3D6;M0R1A7;B4DM94;M0R117;B4DM74;B4DUV3;B2R4C0;Q53HD3;Q32XH3 RPL18A 60S ribosomal protein L18a yes no 0 0 0 3.5 0.5 1 1 45.953 46.013 3 1.1213E-05 12287 20230619_1882_Aki_TMTPro18x_K_F3 150.27 119.58 1689000 1362700 1496000 1731400 1712600 1841500 1885000 1808800 1967200 1771300 1644700 1545900 2206300 1641400 1614800 2149600 1913100 1683700 1560200 1250700 1540500 1719400 1766200 1853100 1892700 1849400 1987200 1785900 1726300 1584300 2204500 1717500 1671700 2124500 1825900 1605000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5148300000 12847 3788 12150 24630;24631 19773;19774 19773 2 9606 Homo sapiens 0.0801372846817685 IFAQYLVPHNLETEER Unmodified 1957.9898 0.98977625 3001 G1UI16;Q29RF7;Q29RF7-3;H0Y9L9 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 0 7 0.816 1 1 1 59.852 59.9 3 1.5332E-08 18047 20230619_1886_Aki_TMTPro18x_K_F6 138.91 103.77 96828 82169 82849 90291 83158 96581 102180 83997 113190 99093 93603 87834 98815 84083 101230 113690 100090 106460 89448 75295 85388 90617 86937 96922 102210 87146 113880 99056 97177 89603 100810 88429 102900 113330 95820 101170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252190000 12848 3001 12151 24632;24633;24634 19775;19776 19775 2 9606 Homo sapiens 0.049100952725211755 IFAVAATYPYQVVR Unmodified 1596.8664 0.86641364 2432 B3KWP3;Q9H2D1;B4DUQ5;A0A3B3IRK5 SLC25A32 Mitochondrial folate transporter/carrier yes no 0 0 0 6 0 1 62.555 62.606 3 0.086808 19308 20230619_1886_Aki_TMTPro18x_K_F6 36.631 13.752 54854 54151 61117 55188 60211 70457 66079 61073 71924 63247 64025 54952 68428 49795 61393 67155 63009 69308 50836 49563 61522 55890 62782 69889 66467 63098 72615 63578 66195 56037 69307 52510 62676 67304 60315 65784 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94938000 12849 2432 12152 24635 19777 19777 1 9606 Homo sapiens 0.09185508682662658 IFCCHGGLSPDLQSMEQIR Unmodified 2247.0235 0.023477694 3705;3704;685 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;B4DJ75;B7ZB67;F8W1A0;P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;B3KXM2;P62136-3;A0A024RBP2;F8W0W8;P36873;P36873-2;Q9UPN1;F8VYE8;F8VR82 HEL-S-80p;PPP1CB;PPP1CC;PPP1CA Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 7.5 0.5 1 1 57.795 57.847 3 2.3086E-49 16909 20230619_1888_Aki_TMTPro18x_K_F8 277 241.25 141320 93206 123890 140850 113990 157350 143620 139390 149020 158740 145620 153700 162770 132880 143500 171210 152520 176050 130380 85784 127300 138460 120260 157300 143270 144180 151460 159220 150380 155530 164630 139830 146920 171620 146000 167080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 364630000 12850 3705;3704;685 12153 24636;24637 19778;19779 19779 2 9606 Homo sapiens -0.050153106138623116 IFDEILVNAADNK Unmodified 1460.7511 0.75110911 3433;1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9;J3KTB7 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 0 0 5 0.816 1 1 1 64.154 64.187 3 0.001435 20002 20230619_1886_Aki_TMTPro18x_K_F6 79.633 63.409 66947 64998 81567 74375 43825 83219 72683 66320 74872 76701 64579 62291 76176 52242 71346 65776 59683 68933 62088 59555 81075 74480 49506 83020 71717 69222 75772 76530 67251 63525 77045 55020 71962 66076 57281 65406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 301550000 12851 1843;3433 12154 24638;24639;24640 19780 19780 1 9606 Homo sapiens 0.03916359761069543 IFDIDEAEEGVK Unmodified 1363.6507 0.65072636 2657 Q6IBR8;B5BU01;P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 3 0 1 61.186 61.215 3 9.8857E-06 18905 20230619_1882_Aki_TMTPro18x_K_F3 109.72 60.641 70335 49181 71814 77140 59385 70719 75004 77995 77847 84508 74359 91756 90929 96903 83076 112120 104430 118040 64989 45275 72680 75497 63110 72119 74843 79362 79079 85270 77319 92982 92071 100510 85959 112670 99809 112000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104470000 12852 2657 12155 24641 19781 19781 1 9606 Homo sapiens -0.016552972926319853 IFDPQNPDENE Unmodified 1316.5521 0.55207495 3590 P46109 CRKL Crk-like protein yes yes 0 0 0 1.5 0.5 1 1 56.097 56.106 2 0.0011113 16835 20230619_1880_Aki_TMTPro18x_K_F1 101.46 85.845 91133 82592 80945 84593 76882 99544 93744 90600 102860 104030 102700 103690 114150 93530 96574 120950 111550 122120 84246 75620 83058 85505 80774 99323 93829 93534 104300 104420 105880 104960 115290 98290 99478 121090 106660 115940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 291220000 12853 3590 12156 24642;24643 19782;19783 19782 2 9606 Homo sapiens -0.09353900537644222 IFDSEEILAGYK Unmodified 1383.6922 0.69219725 3265 O43776;B4DN60 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 0 6 0 1 63.028 63.076 2 0.02406 19489 20230619_1886_Aki_TMTPro18x_K_F6 63.216 46.992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12854 3265 12157 24644 19784 19784 1 9606 Homo sapiens 0.015698834667318806 IFDSEEILAGYKR Unmodified 1539.7933 0.79330827 3265 O43776;B4DN60 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 1 8 0 1 59.517 59.559 3 5.1738E-08 17627 20230619_1888_Aki_TMTPro18x_K_F8 158.86 129.88 128660 152960 154230 135090 158920 135560 141530 150560 109640 151770 145570 107200 132260 83863 192180 109410 95652 90338 119500 139770 154430 138120 163740 137640 142890 152760 115170 151790 146980 110120 137910 88777 188580 108750 92416 86025 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35363000 12855 3265 12158 24645 19785 19785 1 9606 Homo sapiens 0.045003351694276716 IFDTYVGAQR Unmodified 1168.5877 0.58767259 2844 V9GY58;D6RBS5;Q8IZ81 ELMOD2 ELMO domain-containing protein 2 yes no 0 0 0 8 0 1 53.628 53.699 2 7.012E-11 15139 20230619_1888_Aki_TMTPro18x_K_F8 169.09 123.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12856 2844 12159 24646 19786 19786 1 9606 Homo sapiens 0.010122265006657472 IFEEDPAVGAIVLTGGDK Unmodified 1829.9411 0.94109472 1410 A0A384MDW7 yes yes 0 0 0 3 0.816 1 1 1 63.624 63.64 3 3.5709E-24 19855 20230619_1883_Aki_TMTPro18x_K_F4 210.9 181.36 73973 54143 67877 77505 72313 83872 104520 97216 105190 95869 96408 95988 104690 96729 100220 101050 105390 120680 68309 49777 69621 76422 75636 84591 103480 98361 106740 96976 99714 97475 106430 99991 102280 102580 100890 114360 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 454480000 12857 1410 12160 24647;24648;24649 19787;19788;19789 19788 3 9606 Homo sapiens 0.05932181912726264 IFEGNNNVR Unmodified 1061.5254 0.52540669 2794 CON__Q28107 yes yes 0 0 0 6 0 1 42.097 42.192 2 1.1003E-05 10397 20230619_1886_Aki_TMTPro18x_K_F6 171.53 153.5 + 37254 31926 38289 42689 68659 72714 47723 48202 81785 63429 114220 137670 72934 79302 108370 63478 82104 93402 34466 29311 39286 42580 68396 70687 50388 51363 82513 65571 114050 134260 77490 82776 107880 65888 78888 88355 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82892000 12858 2794 12161 24650 19790 19790 1 9606 Homo sapiens -0.0028949984766768466 IFEMGPVFTL Oxidation (M) 1168.5838 0.58383277 1057 A0A0P0C1B5;Q4GCC3;W8DBX9;A0A345WIR4;A0A343GID2;A0A343GG78;A0A343GUB7;A0A059RJF0;A0A059RKP1;A0A059RIQ8;A0A7T4WPY7;A0A342Y881;A0A059R1T0;A0A345ALL9;A0A343GQG5;A0A343YTG0;A0A343YSM3;A0A343YS86;A0A343VHA3;A0A343VD86;A0A343VB45;A0A343V3Y6;A0A059RQ10;A0A343GQY4;A0A059RX67;A0A059RLH3;G9LG51;G9LB98;I2E7Z7;G8JE99;A0A343R0H2;A0A343R0G0;G8JF18;A0A343LIL8;A0A059RKX5;A0A059RNF8;A0A343GRT3;A0A343L1C9;A0A343H8S5;A0A059RIZ2;A0A343H8N6;A0A343H6K8;A0A343GTX4;A0A059RNV8;A0A343GT12;A0A059RPV8;A0A343UGE8;A0A343UE68;A0A343UAQ9;A0A143FZ56;A0A1J0QNY7;A0A1J0QL53;A0A1J0PNZ2;A0A1I9S095;A0A0R6NEC0;A0A1B1PEN9;A0A1B0W3A7;F1AZF2;A0A1B0W1P0;A0A0D4WSL8;A0A343SU82;A0A1B0W0T5;A0A0D4WR75;A0A342YMQ1;A0A343FXU3;A0A343FX71;A0A059RR09;A0A059RRG1;A0A059RSL1;A0A059RTZ6;A0A1L7NY43;A0A0N6YNR7;A0A1S6M799;A0A1V0MCS7;A0A059RFY4;A0A343SEV6;A0A343RU73;A0A343R0N9;A0A059RHR2;A0A059RHY7;A0A059RI53;A0A343GG65;A0A343GFQ9;A0A343GB60;A0A059RQT0;A0A0E3JG40;A0A342Y6A5;A0A342YA83;A0A342Y5A4;A0A059RVU8;A0A342DHX4;A0A0E3JSF1;A0A1W6ER68;Q305H0;P00403;Q0Z7J0;W8DFH5;U3L556;U5Z487;Q5SB08;H9T3W9;H9SA70;X5C6M5;X5BKA4;X2CK15;X2C841;W8D4U9;I6N6Q6;W8D1X2;V9K571;V9JPM6;V9JD22;V9J3S1;U5Z9R9;U3LSI8;Q5SAP1;Q5SA98;T1SWS8;Q6R0V6;Q6RKW8;Q6RNN7;T1Q632;S4STI1;R9Y478;R9Y412;Q9B2U8;Q9B138;Q8WCW3;Q8HNR6;Q8HNR1;Q85KS0;Q7YEH2;Q7YCE6;Q7Y6N0;Q7Y6M3;Q7Y626;Q6VJJ3;Q6VJD8;Q6VIG7;Q6RQ80;Q5S971;I3Q4M2;K7X9X2;I6UIH6;Q4GQP0;Q4GHE1;Q4GCZ4;Q4GCG2;Q4F4V6;Q4EZD4;H9RV93;Q15HH9;Q0Z7S0;Q0Z7K3;I3PYD8;Q0Z7F1;Q0Z7D8;Q09U41;Q06TE6;N0BMC4;L7XQ86;L7XMG0;L7NVC9;K9M370;Q4GVP5;J7FG21;I6PZI4;H9RA87;H9S868;Q19MP7;H9RKS9;H9RJL3;H9RF01;H9RD12;I6PRP7;H9RAX1;H9QLC8;H9QH59;H9Q9T5;H9PMX8;H9PDV6;H9MK30;H9M675;H9LMC2;H9E7D1;G9LKX8;G9LHJ5;A0A342LG30;A0A346LZU9;A0A059RZV1;A0A059QPR4;A0A3S9JHN1;A0A3S9JHM1;A0A346M047;A0A3Q8UG27;A0A3Q8A5Z2;A0A218N9E7;A0A143G082;E5EWG2;A0A059QQA7;A0A6B7Q1T4;A6ZF47;A0A6B9Q7Z4;E7E4E0;A0A6B9RA68;A0A3S9JI82;A0A410RF05;A0A4D6CUW3;A0A4D6FL11;A0A4D6FNQ5;A0A4D6FST5;A0A5P9RNX7;A0A649YE60;A0A649YEF8;A0A649YEQ1;A0A649YES9;A0A6B7PVN7;A0A6B7PYH4;A0A6B7Q1E7;A6ZEU4;A6ZFK3;A0A059QI72;A6Z3M5;A1Z455;A0SA07;A0A6G9L5D8;A0A1B1PEQ8;A0A346LZY3;H9E7P8;A0A8A9WMX6;H9E7W2;A0A343GQC6;H9E7T7;A0A059QPT6;A0A059S242;H9E7F7;A0A7G4BTR8;A0A346M0E0;A0A6B9RCS6;A0A6B9RFD0;A0A6H0MSY6;A0S3T1;A0A6H0MV09;A0A6H0MWV7;A0A7D5PJ23;A0A7D5U3G9;A0A3S8PQC9;A0A7G4BHA1;A0A7T4WPA6;A0A7T0Q5U3;A0A346LZT8;A0A6B9R926;A0A8A6VHT6;A0A8A6VIW3;A0A059QPE9;A0A8F5ZDB1;E5E1A6;A7LF11;E5EWL4;C5H6M7;D1G421;C8YBL1;C8Y3Q5;C8Y3G4;C8XWJ6;C5H6M8;C5H6M5;B2XL43;C5H6M4;C5H6M3;C5H6L3;B5M7M0;B3GUF3;E5EWR3;D2IKF4;A0A346M081;A0A059QVH0;A0A059QTW9;A0A342YDT1;A0A342YTK5;A0A0D4WQL7;A0A343E1A9;A0A0D3MLN1;A0A343E4Y3;A0A343E999;A0A343ECF4;A0A097Q0T5;A0A097PWY7;A0A097PWR7;A0A068IXK4;A0A068BY99;B3DE06;A0A059SAH5;B2XIR3;F2WI31;B2XHT9;G5D8C8;G5D863;G4W3U1;G4W3M6;F2WJ84;F1CIN6;A0A023QZ25;G5D8Q5;Q14XT3;F1AZ87;E7CNQ9;A0A3Q8UFB0;E5FWC0;G5D8J3;A0A346M077;G5D8K6;B1W855;E5E079;B2WRY8;A0A1B1LLS4;E5DZN4;A0A059QS59;A0A059QLX8;E2JFC4;B2CB37;G5D8N2;A7LFA2;H9SYF8;H9RJM6;C9D661;A0A1B1PEM6;G9C8L9;A0A346M0J4;H9E779;H9E7B8;A0A344AJB0;G9LAZ4;E9LAG1;A0A343JMJ6;A0A343JRN0;A0A059RIK5;A0A343GJ29;E2JJS5;A0A343H538;A0A343GF90;A0A023QCZ2;A0A343FU81;A0A068BTX8;A0A343SQK0;A6YW54;V9J128;V9J3C6;A0A023QRX9;A0A343FHH8;A0A059RMS5;A0A068BP29;A0A068BST3;A0A097PYA5;A0A097QC07;A0A0E3D6T2;A0A141ZQJ3;A0A1L1ZCG1;A0A342Y3K6;B2YKU2;A6Z6E8;Q8HQB7;Q4EYL1;L7YNE0;H9T056;A0A6B9R9R6;A0A7D9MZ98;A0A7G5XR55;A0A3Q9CRS0;A0A7G5XR94;A0S0W7;A1Z4V2;A4ZKZ0;A6YXV0;S4UQ76;A0A345AIS8;A7LDC6;B0Z6W4;B2XPS3;D2K1G3;D3YPT7;A0A343KKD7;Q9B1F9;D5M8T1;D7NUN3;A0A3Q8R159;A0A343GLQ2;A0A343H6X5;A0A059QFD5;A0A059QTV7;H9E7E4;A0A059RS76;A0A143FYN0;A0A343GAR7;A0A343GFF5;A0A343GSL9;A0A343GK95;A0A343H8W4;A0A343HXG4;A0A346M014;A0A6B9RAR2;A6YWD1;H9E792;A0A343GGA4 COII;COX2;MT-CO2 Cytochrome c oxidase subunit 2 yes no 0 1 0 5.5 2.69 1 1 1 1 66.588 66.609 2 0.0013706 20752 20230619_1887_Aki_TMTPro18x_K_F7 101.64 84.703 55530 55190 51770 65257 94834 87420 83930 85914 86269 34424 44960 47635 44687 42017 54512 43104 46481 42090 51387 50580 53626 65354 94659 86714 85264 86485 85948 38031 48119 47619 46123 43550 54750 43289 44520 40004 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 216230000 12859 1057 12162 24651;24652;24653;24654 19791;19792;19793;19794 19793 616 4 9606 Homo sapiens 0.006284206825966976 IFEMGPVFTL Unmodified 1152.5889 0.58891815 1057 A0A0P0C1B5;Q4GCC3;W8DBX9;A0A345WIR4;A0A343GID2;A0A343GG78;A0A343GUB7;A0A059RJF0;A0A059RKP1;A0A059RIQ8;A0A7T4WPY7;A0A342Y881;A0A059R1T0;A0A345ALL9;A0A343GQG5;A0A343YTG0;A0A343YSM3;A0A343YS86;A0A343VHA3;A0A343VD86;A0A343VB45;A0A343V3Y6;A0A059RQ10;A0A343GQY4;A0A059RX67;A0A059RLH3;G9LG51;G9LB98;I2E7Z7;G8JE99;A0A343R0H2;A0A343R0G0;G8JF18;A0A343LIL8;A0A059RKX5;A0A059RNF8;A0A343GRT3;A0A343L1C9;A0A343H8S5;A0A059RIZ2;A0A343H8N6;A0A343H6K8;A0A343GTX4;A0A059RNV8;A0A343GT12;A0A059RPV8;A0A343UGE8;A0A343UE68;A0A343UAQ9;A0A143FZ56;A0A1J0QNY7;A0A1J0QL53;A0A1J0PNZ2;A0A1I9S095;A0A0R6NEC0;A0A1B1PEN9;A0A1B0W3A7;F1AZF2;A0A1B0W1P0;A0A0D4WSL8;A0A343SU82;A0A1B0W0T5;A0A0D4WR75;A0A342YMQ1;A0A343FXU3;A0A343FX71;A0A059RR09;A0A059RRG1;A0A059RSL1;A0A059RTZ6;A0A1L7NY43;A0A0N6YNR7;A0A1S6M799;A0A1V0MCS7;A0A059RFY4;A0A343SEV6;A0A343RU73;A0A343R0N9;A0A059RHR2;A0A059RHY7;A0A059RI53;A0A343GG65;A0A343GFQ9;A0A343GB60;A0A059RQT0;A0A0E3JG40;A0A342Y6A5;A0A342YA83;A0A342Y5A4;A0A059RVU8;A0A342DHX4;A0A0E3JSF1;A0A1W6ER68;Q305H0;P00403;Q0Z7J0;W8DFH5;U3L556;U5Z487;Q5SB08;H9T3W9;H9SA70;X5C6M5;X5BKA4;X2CK15;X2C841;W8D4U9;I6N6Q6;W8D1X2;V9K571;V9JPM6;V9JD22;V9J3S1;U5Z9R9;U3LSI8;Q5SAP1;Q5SA98;T1SWS8;Q6R0V6;Q6RKW8;Q6RNN7;T1Q632;S4STI1;R9Y478;R9Y412;Q9B2U8;Q9B138;Q8WCW3;Q8HNR6;Q8HNR1;Q85KS0;Q7YEH2;Q7YCE6;Q7Y6N0;Q7Y6M3;Q7Y626;Q6VJJ3;Q6VJD8;Q6VIG7;Q6RQ80;Q5S971;I3Q4M2;K7X9X2;I6UIH6;Q4GQP0;Q4GHE1;Q4GCZ4;Q4GCG2;Q4F4V6;Q4EZD4;H9RV93;Q15HH9;Q0Z7S0;Q0Z7K3;I3PYD8;Q0Z7F1;Q0Z7D8;Q09U41;Q06TE6;N0BMC4;L7XQ86;L7XMG0;L7NVC9;K9M370;Q4GVP5;J7FG21;I6PZI4;H9RA87;H9S868;Q19MP7;H9RKS9;H9RJL3;H9RF01;H9RD12;I6PRP7;H9RAX1;H9QLC8;H9QH59;H9Q9T5;H9PMX8;H9PDV6;H9MK30;H9M675;H9LMC2;H9E7D1;G9LKX8;G9LHJ5;A0A342LG30;A0A346LZU9;A0A059RZV1;A0A059QPR4;A0A3S9JHN1;A0A3S9JHM1;A0A346M047;A0A3Q8UG27;A0A3Q8A5Z2;A0A218N9E7;A0A143G082;E5EWG2;A0A059QQA7;A0A6B7Q1T4;A6ZF47;A0A6B9Q7Z4;E7E4E0;A0A6B9RA68;A0A3S9JI82;A0A410RF05;A0A4D6CUW3;A0A4D6FL11;A0A4D6FNQ5;A0A4D6FST5;A0A5P9RNX7;A0A649YE60;A0A649YEF8;A0A649YEQ1;A0A649YES9;A0A6B7PVN7;A0A6B7PYH4;A0A6B7Q1E7;A6ZEU4;A6ZFK3;A0A059QI72;A6Z3M5;A1Z455;A0SA07;A0A6G9L5D8;A0A1B1PEQ8;A0A346LZY3;H9E7P8;A0A8A9WMX6;H9E7W2;A0A343GQC6;H9E7T7;A0A059QPT6;A0A059S242;H9E7F7;A0A7G4BTR8;A0A346M0E0;A0A6B9RCS6;A0A6B9RFD0;A0A6H0MSY6;A0S3T1;A0A6H0MV09;A0A6H0MWV7;A0A7D5PJ23;A0A7D5U3G9;A0A3S8PQC9;A0A7G4BHA1;A0A7T4WPA6;A0A7T0Q5U3;A0A346LZT8;A0A6B9R926;A0A8A6VHT6;A0A8A6VIW3;A0A059QPE9;A0A8F5ZDB1;E5E1A6;A7LF11;E5EWL4;C5H6M7;D1G421;C8YBL1;C8Y3Q5;C8Y3G4;C8XWJ6;C5H6M8;C5H6M5;B2XL43;C5H6M4;C5H6M3;C5H6L3;B5M7M0;B3GUF3;E5EWR3;D2IKF4;A0A346M081;A0A059QVH0;A0A059QTW9;A0A342YDT1;A0A342YTK5;A0A0D4WQL7;A0A343E1A9;A0A0D3MLN1;A0A343E4Y3;A0A343E999;A0A343ECF4;A0A097Q0T5;A0A097PWY7;A0A097PWR7;A0A068IXK4;A0A068BY99;B3DE06;A0A059SAH5;B2XIR3;F2WI31;B2XHT9;G5D8C8;G5D863;G4W3U1;G4W3M6;F2WJ84;F1CIN6;A0A023QZ25;G5D8Q5;Q14XT3;F1AZ87;E7CNQ9;A0A3Q8UFB0;E5FWC0;G5D8J3;A0A346M077;G5D8K6;B1W855;E5E079;B2WRY8;A0A1B1LLS4;E5DZN4;A0A059QS59;A0A059QLX8;E2JFC4;B2CB37;G5D8N2;A7LFA2;H9SYF8;H9RJM6;C9D661;A0A1B1PEM6;G9C8L9;A0A346M0J4;H9E779;H9E7B8;A0A344AJB0;G9LAZ4;E9LAG1;A0A343JMJ6;A0A343JRN0;A0A059RIK5;A0A343GJ29;E2JJS5;A0A343H538;A0A343GF90;A0A023QCZ2;A0A343FU81;A0A068BTX8;A0A343SQK0;A6YW54;V9J128;V9J3C6;A0A023QRX9;A0A343FHH8;A0A059RMS5;A0A068BP29;A0A068BST3;A0A097PYA5;A0A097QC07;A0A0E3D6T2;A0A141ZQJ3;A0A1L1ZCG1;A0A342Y3K6;B2YKU2;A6Z6E8;Q8HQB7;Q4EYL1;L7YNE0;H9T056;A0A6B9R9R6;A0A7D9MZ98;A0A7G5XR55;A0A3Q9CRS0;A0A7G5XR94;A0S0W7;A1Z4V2;A4ZKZ0;A6YXV0;S4UQ76;A0A345AIS8;A7LDC6;B0Z6W4;B2XPS3;D2K1G3;D3YPT7;A0A343KKD7;Q9B1F9;D5M8T1;D7NUN3;A0A3Q8R159;A0A343GLQ2;A0A343H6X5;A0A059QFD5;A0A059QTV7;H9E7E4;A0A059RS76;A0A143FYN0;A0A343GAR7;A0A343GFF5;A0A343GSL9;A0A343GK95;A0A343H8W4;A0A343HXG4;A0A346M014;A0A6B9RAR2;A6YWD1;H9E792;A0A343GGA4 COII;COX2;MT-CO2 Cytochrome c oxidase subunit 2 yes no 0 0 0 3.67 3.09 1 1 1 68.613 68.622 2 0.00036502 21344 20230619_1888_Aki_TMTPro18x_K_F8 129.4 112.47 10650 11428 13863 16230 16982 19629 20990 20286 21005 7055.1 11106 7224.8 11925 7836 11607 11512 12206 9174.3 9891.4 10491 13885 16034 17490 19593 20916 20327 20947 7867.7 11876 7251.2 12120 8264.4 11839 11379 11652 8749.7 3 3 3 3 3 3 3 3 3 3 3 2 3 3 3 3 3 3 52782000 12860 1057 12162 24655;24656;24657 19795;19796 19796 2 9606 Homo sapiens 0.018727245452055286 IFEPPPPK Unmodified 923.51165 0.5116541 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 7.5 0.5 1 1 51.753 51.828 2 0.03526 14413 20230619_1887_Aki_TMTPro18x_K_F7 83.614 49.536 264460 241220 256460 282390 245360 307460 262370 273230 328730 318090 331220 331670 361940 299840 323360 363380 385490 372370 244660 221110 261200 282130 256610 308170 265720 282700 331280 319550 341040 335070 366600 313760 333130 364530 368140 353630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181070000 12861 3246 12163 24658;24659 19797 19797 1 9606 Homo sapiens 0.04683874391173504 IFEPPPPKK Unmodified 1051.6066 0.60661712 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 1 2 0 1 47.825 47.896 3 0.010996 13466 20230619_1881_Aki_TMTPro18x_K_F2 66.435 49.409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12862 3246 12164 24660 19798 19798 1 9606 Homo sapiens 0.08287807862370755 IFESVTLPSNR Unmodified 1261.6667 0.6666512 1719;1783 A0A7R6KYT5;E9PR05;A0A3B3ITZ1;A0A8I5KXR3;Q03164-2;Q03164;Q03164-3 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 no no 0 0 0 1 0 1 56.848 56.848 2 0.0038745 17191 20230619_1880_Aki_TMTPro18x_K_F1 116.12 96.503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12863 1719;1783 12165 24661 19799 19799 1 9606 Homo sapiens 0.046284537349492894 IFEYETQR Unmodified 1084.5189 0.51892433 3617 P50402;A0A804HIV7;A0A804HLA2 EMD Emerin yes no 0 0 0 4 0 1 49.09 49.128 2 0.0025096 13563 20230619_1883_Aki_TMTPro18x_K_F4 125.58 100.64 183820 161470 190940 206460 184540 224170 214600 220020 295730 254640 276960 335510 364740 331230 257490 424070 406080 475160 170100 148160 193400 205020 193270 225180 217150 226010 295870 258110 289160 336920 364710 346660 272860 426950 387570 450510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 369860000 12864 3617 12166 24662 19800 19800 1 9606 Homo sapiens -0.019954377990416106 IFFAGDTIPK Unmodified 1107.5964 0.59644637 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4;A0A804HJC2 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 1 0 1 61.735 61.735 3 0.05173 19206 20230619_1880_Aki_TMTPro18x_K_F1 45.997 19.482 17719 14959 18663 18392 16357 18783 20589 17051 21076 21941 20182 22448 21524 22031 23944 25995 23927 24475 16395 13723 18846 18300 17284 18925 20525 17684 21419 21932 20835 22747 22067 22930 24316 25970 22897 23261 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25791000 12865 3299 12167 24663 19801 19801 1 9606 Homo sapiens 0.04695200137120992 IFFPGSHPVR Unmodified 1155.6189 0.61891314 4524 Q9H7B4;Q9H7B4-3;B3KN46;Q9H7B4-2 SMYD3 Histone-lysine N-methyltransferase SMYD3 yes no 0 0 0 5 0 1 46.684 46.761 3 5.2184E-06 12340 20230619_1885_Aki_TMTPro18x_K_F5 161.27 132.87 45652 38476 45491 48236 43955 44768 44111 44353 47974 49796 49106 49620 54293 48941 57495 63520 53524 56657 42220 35302 46207 47869 45753 45539 44611 45500 48731 50029 50581 50386 55414 51255 58225 63198 51272 53874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95155000 12866 4524 12168 24664 19802 19802 1 9606 Homo sapiens 0.04732844325417318 IFGGEIK Unmodified 762.42759 0.42759012 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;A0A7P0T9D6;I3L514 P4HB Protein disulfide-isomerase yes no 0 0 0 7.6 0.49 2 3 54.621 54.686 2;3 0.044641 15971 20230619_1888_Aki_TMTPro18x_K_F8 88.643 2.7943 676800 560670 659900 682360 618000 757930 753400 707870 881810 847490 932950 935810 878870 787490 813420 1026900 1042200 1041700 625740 514310 671410 680170 649620 759400 755770 730520 892830 851820 952400 941260 896110 829650 842110 1028200 994940 989290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3030199999.9999995 12867 537 12169 24665;24666;24667;24668;24669 19803;19804;19805 19804 3 9606 Homo sapiens 0.03687343294291168 IFGGLDMLAEK Oxidation (M) 1208.6111 0.61111015 3990 Q53F35;Q92688-2;Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes no 0 1 0 7.67 0.471 1 2 62.469 62.498 3 0.00015733 18904 20230619_1887_Aki_TMTPro18x_K_F7 110.84 81.294 739000 603200 660380 809990 810600 797020 790080 860700 895340 858720 873640 819000 843630 679120 829340 972720 770050 832660 682720 553920 680410 800620 829030 808530 801240 874700 905450 866570 895780 829040 860920 720660 841170 964520 737780 792110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1437700000 12868 3990 12170 24670;24671;24672 19806;19807 19806 2635 2 9606 Homo sapiens 0.015149042229495535 IFGGLDMLAEK Unmodified 1192.6162 0.61619553 3990 Q53F35;Q92688-2;Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes no 0 0 0 7.5 0.5 1 1 63.802 63.824 2;3 4.8406E-07 19444 20230619_1888_Aki_TMTPro18x_K_F8 141.88 118.64 924900 747050 874100 1012600 706410 1009100 975690 1043800 1097300 1157600 983330 1111600 1182300 1072100 1090300 1414700 565300 1242200 854770 686110 890820 1000500 756230 1020700 972200 1066800 1107300 1162300 1024000 1129300 1195700 1124800 1083600 1405500 550640 1179200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2498600000 12869 3990 12170 24673;24674 19808;19809 19809 2 9606 Homo sapiens 0.027592080855583845 IFGLLMGTLQK Unmodified 1219.6999 0.69986558 4506 Q9H307;A8K964 PNN Pinin yes no 0 0 0 7 0 1 65.904 65.929 3 0.00027046 20504 20230619_1887_Aki_TMTPro18x_K_F7 105.2 60.886 19728 17914 21301 16158 15068 18602 22039 18501 20303 11687 14622 13951 14525 11180 19099 11452 13770 10484 18267 16385 21387 16523 16333 18630 21762 18738 20516 12258 15277 13973 15032 11639 19003 11478 13204 9980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20587000 12870 4506 12171 24675 19810 19810 1 9606 Homo sapiens 0.09880364253308471 IFGPIWNR Unmodified 1001.5447 0.54468557 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4;A0A8Q3WL93;A0A8Q3WLT0;A0A8Q3WL80;E7EM57;Q0PHS1;A0A8Q3WL83;E9PD92;Q0PHS6 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 6 0 1 61.108 61.162 2 0.0024146 18616 20230619_1886_Aki_TMTPro18x_K_F6 127.1 102.89 829650 644330 741200 804210 775690 1146800 968930 972360 1247400 869700 838480 979860 898710 797980 1055000 1018100 1005500 1117300 766230 591340 761710 803320 811100 1128700 973850 1002400 1237600 888650 883590 983390 923200 840720 1067100 1025200 963310 1059800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 568270000 12871 1464 12172 24676 19811 19811 1 9606 Homo sapiens 0.043975012338933084 IFGTDSQYNAYNEK Unmodified 1648.7369 0.73691561 3942 Q15800;Q15800-2 MSMO1 Methylsterol monooxygenase 1 yes no 0 0 0 7 0 1 54.598 54.662 3 0.00028558 15600 20230619_1887_Aki_TMTPro18x_K_F7 103.76 87.819 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12872 3942 12173 24677 19812 19812 1 9606 Homo sapiens -0.061503374578705916 IFGVTTLDIVR Unmodified 1232.7129 0.71287311 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 2.5 0.5 1 1 63.004 63.023 2 7.8502E-09 19689 20230619_1882_Aki_TMTPro18x_K_F3 185.81 172.31 1021100 1017500 1037800 1144800 1297300 1595900 1184900 1320700 1680000 381280 435830 250810 261940 255860 764750 403670 420520 202700 945610 932060 1057600 1151500 1326200 1572700 1215900 1342600 1629500 434410 497740 262470 297390 271200 747750 393260 404170 195450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 974030000 12873 297 12174 24678;24679 19813 19813 1 9606 Homo sapiens 0.105825186370339 IFHELTQTDK Unmodified 1230.6245 0.62445203 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 6.5 0.5 1 1 49.288 49.369 3 7.2656E-10 13300 20230619_1887_Aki_TMTPro18x_K_F7 197.21 154.18 860900 440140 764890 939460 820190 806500 882490 827280 927200 1035600 1112300 1147200 1140100 1012300 1118800 1277000 1079300 1207600 793450 407690 786740 904900 848590 825600 887710 849870 949950 1038600 1134200 1155200 1161800 1062200 1136800 1274700 1034000 1147200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2707500000 12874 2973 12175 24680;24681 19814;19815 19815 2 9606 Homo sapiens 0.018364783265496953 IFHIDTNALHVPR Unmodified 1531.8259 0.82594581 3332 O94805 ACTL6B Actin-like protein 6B yes yes 0 0 0 2.5 0.5 1 1 52.077 52.13 4 4.7317E-11 15362 20230619_1881_Aki_TMTPro18x_K_F2 185.59 162.22 16942 9664.7 18535 16229 8505.7 8877.9 13406 11060 16513 17369 17412 16787 19521 18758 19225 22116 22416 22163 15649 8913.8 18527 15755 9756 9583.5 13342 11337 16685 17203 17914 17144 19861 19454 19746 22164 21415 21051 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70985000 12875 3332 12176 24682;24683 19816 19816 1 9606 Homo sapiens 0.08130587082928287 IFHINPR Unmodified 895.50282 0.50282075 1633 A0A6Q8PGB0;P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 0 4 0 1 41.597 41.64 3 0.0017842 10247 20230619_1883_Aki_TMTPro18x_K_F4 133.99 71.146 57608 37353 49733 53903 52223 56232 62970 57219 63161 62315 66792 71014 70060 56858 57922 77731 70553 68399 53139 34363 51243 53094 54328 56696 62863 58547 64479 62959 68524 71231 70815 60209 59920 77197 67367 65073 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35474000 12876 1633 12177 24684 19817 19817 1 9606 Homo sapiens 0.05088945545367096 IFHLEVCSR Unmodified 1159.5808 0.58081308 2290 B2RAY1;Q92783-2;Q92783;O75886;O75886-2 STAM;STAM2 Signal transducing adapter molecule 1;Signal transducing adapter molecule 2 yes no 0 0 0 1 0 1 48.029 48.029 3 0.015076 13604 20230619_1880_Aki_TMTPro18x_K_F1 60.102 31.894 9701.5 7729.2 11015 8575.3 10278 12106 11941 9138.9 12512 9813.1 9388.3 10757 9854.6 10996 9199.1 10419 10948 11815 8979.3 7084.9 11056 8642.7 10779 11906 11955 9566.1 12584 9921.9 9811.1 10880 10033 11294 9469.2 10555 10464 11204 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24694000 12877 2290 12178 24685 19818 19818 1 9606 Homo sapiens 0.007405903484368537 IFIGTFK Unmodified 824.47963 0.47962569 2604 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q9UIS4;Q15182;P14678-2;P63162;P14678;P63162-2;P14678-3;Q53HE7;J3KRY3;S4R3P3;Q6LBS1 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated proteins B and B';Small nuclear ribonucleoprotein-associated protein N yes no 0 0 0 4.5 0.5 1 1 61.155 61.182 2 0.0049029 18778 20230619_1883_Aki_TMTPro18x_K_F4 154.09 76.375 2511300 2192600 2131900 2578500 2363600 2968300 2520200 2657700 3122700 3037200 2993800 3147300 3113400 2586000 1222500 4611100 1669200 3624200 2320200 2010200 2203800 2577000 2445700 2964200 2550800 2746400 3142600 3052800 3080500 3174300 3083500 2791600 1321200 4534800 1606300 3445600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2108999999.9999998 12878 2604 12179 24686;24687 19819;19820 19819 2 9606 Homo sapiens 0.06036506708039724 IFINLPR Unmodified 871.52797 0.52797287 2268 V9HW51;B2R960;O43396;Q59G46;K7ER96;B3KT45 HEL-S-114;TXNL1 Thioredoxin-like protein 1 yes no 0 0 0 5 0.816 1 1 1 58.057 58.1 2 0.018813 17101 20230619_1885_Aki_TMTPro18x_K_F5 106.76 53.295 340930 286280 301510 353470 343870 442070 366620 379970 494960 342550 305250 296860 343700 270990 348150 410140 362810 339920 315000 262630 310600 352500 355260 438670 372150 391380 489080 347190 323800 302830 349760 287790 355090 405790 346840 323680 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 264650000 12879 2268 12180 24688;24689;24690 19821;19822;19823 19821 3 9606 Homo sapiens 0.0870700034794254 IFISNTFNPAK Unmodified 1250.6659 0.66592292 119 Q96GM5;A0A024R102;A0A024R137;Q96GM5-2;B4DF50 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 0 0 0 4.5 0.5 1 1 59.759 59.786 3 0.00018133 17812 20230619_1885_Aki_TMTPro18x_K_F5 96.015 65.465 39237 42896 38589 36989 42918 79626 45697 46416 81413 22943 22412 24509 25255 22474 33325 21154 22240 25590 36353 39200 39353 38406 44644 76452 46961 49056 78368 24655 25920 24747 26094 23183 33066 21570 21410 24246 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32038000 12880 119 12181 24691;24692 19824 19824 1 9606 Homo sapiens 0.05061659085890824 IFKPEELR Unmodified 1030.5811 0.58113065 4306;1596 A0A669KB12;Q09472;Q7Z6C1;Q92793-2;Q92793;B4E3L4;I3L466 EP300;CREBBP Histone acetyltransferase p300;CREB-binding protein no no 0 0 1 7.5 0.5 1 1 48.253 48.33 3 0.013147 12842 20230619_1888_Aki_TMTPro18x_K_F8 76.221 17.069 180980 149390 171030 190120 191470 207580 203730 197730 214960 211400 213960 201230 205340 173130 216000 187500 197220 176170 167280 137100 174990 188860 197570 208360 205050 203060 218350 212600 219170 203770 210300 180270 218250 187690 188740 167520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102830000 12881 1596;4306 12182 24693;24694 19825 19825 1 9606 Homo sapiens 0.06706333339934645 IFLDPEKR Unmodified 1016.5655 0.56548059 2219 B4DGN8;B2R5M9;Q02809;Q02809-2;Q5JXB7 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes no 0 0 1 8 0 1 49.245 49.317 3 0.033975 13230 20230619_1888_Aki_TMTPro18x_K_F8 63.419 30.526 173450 148600 177600 198890 246710 260290 245010 237090 248620 233770 222920 217740 223120 174570 289230 208830 185780 167430 160460 136430 181260 197460 250570 258000 247170 243680 252130 235950 230090 220270 230630 183320 286790 207300 178630 159530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 325050000 12882 2219 12183 24695 19826 19826 1 9606 Homo sapiens 0.05786046822890967 IFLENHVR Unmodified 1026.5611 0.56106391 964 Q13617-2;Q13617;A0A0A0MTN0;A0A8I5QJI3;A0A8I5KYP8;A0A140VKB1;A0A8I5KUA9;A0A8I5KQQ5;Q5T2B5;A0A8I5KU22;A0A0D9SET6;A0A8I5KVR3;A0A8I5KYZ8;B7Z1Y1;A0A8I5KXB2;A0A8I5KPX0;A0A8I5KS98;A0A8I5KTY5;A0A8I5KVE2;A0A8I5QKN3;A0A8I5KWB8;A0A8I5KV54;A0A8I5KYM7;Q5T2B7;A0A8I5KTY2;A0A8I5KSW7;A0A8I5KR51 CUL2 Cullin-2 yes no 0 0 0 8 0 1 42.965 42.975 3 1.6796E-05 10680 20230619_1888_Aki_TMTPro18x_K_F8 186.13 115.86 67371 58821 66949 69786 65799 61948 74210 74615 83561 84604 80619 89066 88266 83017 96535 87702 89314 96528 62319 53933 68032 69505 68580 63572 74640 75628 84519 85092 83284 89967 90281 86060 97571 88589 85575 91562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172730000 12883 964 12184 24696 19827 19827 1 9606 Homo sapiens 0.048845823999727145 IFLLTNNNLLLADQK Unmodified 1728.9774 0.97742065 2174 E9PDF6;B0I1S9;O43795-2;O43795;B3KQI2;H7C2Y7 MYO1B Unconventional myosin-Ib yes no 0 0 0 4 0 1 64.47 64.478 3 1.0096E-07 20201 20230619_1883_Aki_TMTPro18x_K_F4 130.2 111.89 17680 15229 17807 17864 19523 19389 19316 17272 21584 18729 17434 15632 17029 15311 20019 16595 16669 17022 16354 13962 18101 17848 20120 19452 19554 17837 21695 18767 18062 16000 17538 15873 20100 16693 15983 16162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32326000 12884 2174 12185 24697 19828 19828 1 9606 Homo sapiens 0.14209103600137496 IFLSHEELEPDSIER Unmodified 1812.8894 0.8893935 1644 P33527-9;I3L4X2;P33527-5;A0A7I2V2E0;P33527-2;P33527-3;P33527;Q9UQ98;Q68CP7;A0A0A0MS99;P33527-4;A0A7I2V4C6;P33527-6;P33527-7;P33527-8;G0ZCM3 ABCC1;MRP;DKFZp781G125 Multidrug resistance-associated protein 1 yes no 0 0 0 2 0.816 1 1 1 53.84 53.867 3 1.7845E-14 16147 20230619_1881_Aki_TMTPro18x_K_F2 188.31 168.57 29690 24992 26914 33787 23291 31640 31666 23385 36885 32309 37114 32260 33674 33248 37825 34984 36628 39753 27437 22949 27568 33346 24762 31952 31585 24743 37259 32205 37896 32802 34704 34345 38310 35406 35079 37695 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68121000 12885 1644 12186 24698;24699;24700 19829 19829 1 9606 Homo sapiens 0.015464382188383752 IFNFYPR Unmodified 955.49159 0.49158736 2811 O14531;D3DRG7;Q5T0Q6 DPYSL4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 6 0 1 59.373 59.435 2 0.013968 17879 20230619_1886_Aki_TMTPro18x_K_F6 113.25 38.917 78636 82993 74215 67883 111360 172220 97746 106220 167520 20366 17301 20601 22284 19128 42876 27445 25147 23221 72811 75822 76349 71190 112920 164610 101360 110670 160250 25555 25091 20937 23634 20212 42171 27260 24219 22107 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33315000 12886 2811 12187 24701 19830 19830 1 9606 Homo sapiens 0.012061234512202645 IFNLSGGEK Unmodified 963.50255 0.50254598 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;B3KVJ5 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 1 0 1 54.839 54.839 3 0.000202 16340 20230619_1880_Aki_TMTPro18x_K_F1 125.97 56.537 43141 30599 39623 41414 31869 46757 38947 40088 51398 48443 41509 49443 58153 48284 36740 59342 58661 60165 39831 28117 40448 40994 34029 46686 39254 41638 51288 48563 43810 50095 57827 50439 39070 59431 55925 57131 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34534000 12887 4593 12188 24702 19831 19831 1 9606 Homo sapiens 0.019334810348709652 IFNLYPR Unmodified 921.50724 0.50723743 1217;3880;2441 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;B4DLZ4;H0YBT4;Q14117;B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2 DPYSL3;DPYS;CRMP1 Dihydropyrimidinase-related protein 3;Dihydropyrimidinase;Dihydropyrimidinase-related protein 1 no no 0 0 0 5 0 1 57.383 57.442 2 0.0029346 16841 20230619_1885_Aki_TMTPro18x_K_F5 129.96 99.243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12888 1217;2441;3880 12189 24703 19832 19832 1 9606 Homo sapiens 0.04334409968271302 IFNSDELIHFR Unmodified 1389.7041 0.70409934 4594 Q9NU22;Q6ZVV6 MDN1 Midasin yes no 0 0 0 7 0 1 58.189 58.242 3 1.2274E-24 17095 20230619_1887_Aki_TMTPro18x_K_F7 266.26 238.09 32602 26574 32278 32008 27121 28958 29220 29251 30718 39571 33552 40717 42367 33821 34876 49242 48576 53084 30143 24376 32730 31849 28627 29532 29410 30148 31386 39452 34725 41035 42607 35950 36432 49398 46376 50362 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82410000 12889 4594 12190 24704 19833 19833 1 9606 Homo sapiens 0.024835450005411985 IFPGDTILETGEVIPPMK Oxidation (M) 1972.0227 0.022715862 3343 O95139;A0A087WZX2 NDUFB6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 yes no 0 1 0 6 0 1 63.503 63.551 3 0.0058439 19677 20230619_1886_Aki_TMTPro18x_K_F6 63.682 47.189 20040 17405 18952 20193 20451 24201 22589 22633 24396 21833 22329 24562 23504 23160 23858 25680 26135 29728 18529 15955 19376 20219 21196 24130 22709 23208 24666 22197 23080 24763 23994 24061 24391 25987 25009 28180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7208500 12890 3343 12191 24705 19834 19834 1957 1 9606 Homo sapiens 0.07558541280332065 IFPGDTILETGEVIPPMK Unmodified 1956.0278 0.02780124 3343 O95139;A0A087WZX2 NDUFB6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 yes no 0 0 0 6.5 0.5 1 1 64.307 64.345 3 8.4302E-14 19817 20230619_1887_Aki_TMTPro18x_K_F7 155.28 132.14 77348 63347 86121 79001 73631 102720 85433 85014 98816 85416 82111 105940 100780 93288 106400 105130 110290 120900 71589 58126 86550 78815 77945 101610 85895 88088 99241 86970 86055 106130 102600 97249 108310 106340 105560 114620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198200000 12891 3343 12191 24706;24707 19835 19835 1 9606 Homo sapiens 0.08802845142940896 IFPLRPDYQEPSR Unmodified 1616.8311 0.83109076 553 Q6MZT2;A0A024R906;Q16832 DKFZp686D1354;DDR2 Discoidin domain-containing receptor 2 yes no 0 0 1 1 0 1 50.733 50.733 3 0.00068215 14652 20230619_1880_Aki_TMTPro18x_K_F1 84.753 55.796 67809 50723 65284 73447 50702 58501 65217 61460 63612 69692 68487 82970 87182 68797 87435 91242 77679 91382 62648 46634 66357 72088 54216 60340 64896 62862 65140 70370 70990 83128 88345 72635 88392 91325 74512 86743 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290380000 12892 553 12192 24708 19836 19836 1 9606 Homo sapiens 0.04734846154860861 IFQFQNFTNTR Unmodified 1414.6993 0.69934831 3961 Q2NL82 TSR1 Pre-rRNA-processing protein TSR1 homolog yes yes 0 0 0 6 0 1 60.783 60.841 3 7.682E-05 18480 20230619_1886_Aki_TMTPro18x_K_F6 123.01 68.591 21231 17158 18688 18974 17899 24677 18047 17825 27209 20215 17568 18634 20748 17329 19522 24411 22392 19566 19611 15727 19188 19088 18723 24356 18469 18747 26806 20280 18625 18950 21024 18289 20057 24132 21377 18645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18761000 12893 3961 12193 24709 19837 19837 1 9606 Homo sapiens 0.008586608577843435 IFQGNVHNFEK Unmodified 1331.6622 0.66223452 1897 B2R9I9;A0MNP2;Q96DI7;Q96DI7-2;Q9NSS8 WDR57;SNRNP40;DKFZp434D199 U5 small nuclear ribonucleoprotein 40 kDa protein yes no 0 0 0 8 0 1 48.281 48.348 3 2.7317E-06 12825 20230619_1888_Aki_TMTPro18x_K_F8 148.18 103.11 202330 205390 208990 296640 278840 316630 275540 285230 338690 315940 299310 344060 378490 296240 314180 341490 354740 369980 187420 188630 213360 292070 284140 317830 279900 294420 340040 318580 312690 346220 380590 309710 322990 343970 339130 351050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288030000 12894 1897 12194 24710 19838 19838 1 9606 Homo sapiens 0.009669893120417328 IFQNAPTDPTQDFSTQVAK Unmodified 2107.0222 0.02219859 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 7.5 0.5 1 1 60.254 60.295 3 4.1908E-20 17885 20230619_1887_Aki_TMTPro18x_K_F7 189.87 184.29 142190 117260 136500 153030 147940 169690 162980 161940 180590 188830 184760 178430 204990 175470 186280 204380 204250 217300 131440 107650 139430 151790 153230 170120 164010 166680 183250 189090 190220 181550 207700 182670 190850 205590 195340 206210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 445610000 12895 1213 12195 24711;24712 19839;19840 19839 2 9606 Homo sapiens 0.01296837884819979 IFQVAQELSGEDMHQFHR Oxidation (M) 2187.0167 0.016736057 268 A0A024R3V8;Q99598;C4P0D6;C4P0D8;Q7Z3N9;Q5VVQ1;C4P0D4 TSNAX;DISC1;DKFZp686G1650 Translin-associated protein X yes no 0 1 0 6 0 1 56.645 56.717 4 0.0012308 16787 20230619_1886_Aki_TMTPro18x_K_F6 72.21 55.33 23085 21264 27267 25769 23707 30733 25218 23018 30874 26127 24580 20826 22478 17977 24733 24112 22711 22297 21395 19497 27292 25719 24980 30515 25518 24139 30873 26096 25404 21295 23108 18971 24996 24033 21746 21198 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152210000 12896 268 12196 24713 19841 19841 159 1 9606 Homo sapiens -0.02929164178613064 IFRDEGGK Unmodified 920.47158 0.4715802 3439 P12236;Q6I9V5;Q59EI9 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes no 0 0 1 6 0.816 1 1 1 40.473 40.556 3 0.0034994 9496 20230619_1887_Aki_TMTPro18x_K_F7 102.62 24.881 1399500 959780 1173900 1418000 1463300 1390700 1434300 1589100 2027700 1725500 1931100 1815700 2047900 1666800 1343800 2025600 2545300 1978600 1291100 882960 1216800 1393500 1496100 1413000 1466300 1613000 2027400 1739800 1988900 1835200 2053900 1743500 1448600 2025100 2419800 1881800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1378900000 12897 3439 12197 24714;24715;24716 19842;19843 19843 2 9606 Homo sapiens 0.00816327720622212 IFRDGEEAGAYDGPR Unmodified 1651.759 0.75904803 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;A0A8I5KYJ6;A0A8I5KXE2;A0A8I5KP58;A0A8I5QJM1;H7BZJ3 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 1 3 0.816 1 1 1 44.127 44.193 3 2.073E-09 11449 20230619_1882_Aki_TMTPro18x_K_F3 145.46 131.78 961310 792180 803820 808330 947700 917870 907160 1024500 961970 1100000 1194100 1039900 1084100 979210 1151600 1292600 1201900 1168000 887730 725520 831610 817170 971270 923030 919350 1040600 986760 1105400 1208600 1057500 1113400 1028300 1173400 1286600 1149200 1110800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1460299999.9999998 12898 2389 12198 24717;24718;24719 19844;19845;19846 19845 3 9606 Homo sapiens -0.04076112989491776 IFREDYSITTK Unmodified 1371.7034 0.70343063 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8;A0A8V8TQ76;A0A8V8TRI2 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 0 1 4.5 3.5 1 1 50.759 50.797 3 6.9881E-05 14690 20230619_1880_Aki_TMTPro18x_K_F1 130.77 105.43 419500 351320 386420 428290 415750 447080 449190 444580 481610 499440 512530 483700 539490 438860 491720 555200 553210 541310 387710 322260 395980 426460 430380 450680 452040 455840 490230 501290 525410 490450 547370 460440 504590 555100 528630 514330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 270420000 12899 117 12199 24720;24721 19847;19848 19847 2 9606 Homo sapiens 0.032447055608372466 IFSGVFVK Unmodified 895.51674 0.51673948 747 A0A024RD36;Q6DKI1;B7Z4G0;R4GMU7;Q6DKI1-2 RPL7L1 60S ribosomal protein L7-like 1 yes no 0 0 0 4.5 0.5 1 1 61.916 61.943 2 0.0018049 18775 20230619_1885_Aki_TMTPro18x_K_F5 150.17 91.588 360310 280680 301610 365300 309130 377010 377840 353760 365750 330900 306510 359470 384580 311560 344180 437460 374580 458070 332620 257710 311840 361990 322660 379680 376520 362570 371000 336550 321140 362070 388070 329720 352930 438400 358680 434550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221890000 12900 747 12200 24722;24723 19849 19849 1 9606 Homo sapiens 0.06480178253798385 IFSIIAEGEMHEAIK Unmodified 1686.8651 0.86509301 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6;Q9BVS9 IPO5;RANBP5 Importin-5 yes no 0 0 0 7 0 1 62.536 62.572 3 5.1817E-09 18964 20230619_1887_Aki_TMTPro18x_K_F7 141.85 98.549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12901 782 12201 24724 19850 19850 1 9606 Homo sapiens 0.04913506531624989 IFSIPDEK Unmodified 947.4964 0.49639797 4739 Q9Y4E8-2;Q9Y4E8-3;Q9Y4E8;H0YI31;Q9Y4E8-4;F8VZG8;H0YHM4;F8VVY7 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes no 0 0 0 6 0 1 58.004 58.072 2 0.0023852 17337 20230619_1886_Aki_TMTPro18x_K_F6 127.56 74.398 41366 39495 41717 49122 35591 44124 41321 45781 52152 56523 56514 53570 60480 47548 46827 65446 59337 64311 38293 36219 42303 48747 37661 45029 41697 46941 52717 56447 57912 54339 60934 50215 48654 65354 56686 61076 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48556000 12902 4739 12202 24725 19851 19851 1 9606 Homo sapiens 0.02054962803322269 IFSPNVVNLTLVDLPGMTK Oxidation (M) 2073.118 0.11801323 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A994J696;H0YI79;A0A994J6A0;A0A994J3G1;F8W1W3;A0A994J3F1;A0A994J409;B4DPZ9;O00429-2;O00429-8;O00429-4;O00429-9;D3DUW7;Q32Q67 DNM1L Dynamin-1-like protein no no 0 1 0 3.5 0.5 1 1 64.803 64.823 3 5.3717E-05 20487 20230619_1882_Aki_TMTPro18x_K_F3 85.927 68.01 13068 10323 12200 13341 13392 15624 15149 12378 14387 14629 16565 16336 16926 15397 16881 16512 14008 20412 12074 9476.7 12492 13250 13866 15549 15145 12940 14787 14720 16912 16477 17262 15974 17009 16795 13475 19323 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34191000 12903 3212;3213 12203 24726;24727 19852;19853 19852 1892 2 9606 Homo sapiens 0.12437894471395339 IFSPNVVNLTLVDLPGMTK Unmodified 2057.1231 0.12309861 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A994J696;H0YI79;A0A994J6A0;A0A994J3G1;F8W1W3;A0A994J3F1;A0A994J409;B4DPZ9;O00429-2;O00429-8;O00429-4;O00429-9;D3DUW7;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 0 4.5 0.5 1 1 65.925 65.953 3 4.1676E-20 20534 20230619_1885_Aki_TMTPro18x_K_F5 189.9 165.7 38616 33768 39248 49518 37559 46838 50473 46398 45676 43639 42934 47022 47546 40777 40057 46156 50337 52582 35728 31033 39869 48647 39506 47525 49984 47388 46695 44350 44414 47359 48037 42562 41465 46638 48078 49867 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 93125000 12904 3212;3213 12203 24728;24729 19854;19855 19855 2 9606 Homo sapiens 0.13682198333981432 IFSQRPFDK Unmodified 1136.5978 0.59784335 2225 B2R5U7;Q03701 CEBPZ CCAAT/enhancer-binding protein zeta yes no 0 0 1 4 0 1 49.898 49.933 3 0.019674 13969 20230619_1883_Aki_TMTPro18x_K_F4 67.022 19.762 234060 169830 198250 252780 216220 288170 253260 251190 326740 280130 268380 317950 354110 285940 239780 393600 339020 364760 216000 156210 205050 248720 224760 287630 255380 259990 326370 282870 282060 320020 353280 301700 252170 391700 323590 346670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187390000 12905 2225 12204 24730 19856 19856 1 9606 Homo sapiens 0.035008342259061465 IFTFAEK Unmodified 854.4538 0.45380487 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2;A0A0C4DGZ5;A0A6Q8PFX4 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 8 0 1 59.567 59.609 2 0.023568 17644 20230619_1888_Aki_TMTPro18x_K_F8 100.39 52.217 66742 55357 61672 64792 46560 63621 62018 65410 76412 70653 72745 92127 80373 67052 74109 93629 84418 91809 61681 50760 62874 64662 50103 64443 62110 66854 76868 71766 75276 91666 81496 71379 76150 93498 80722 87193 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30581000 12906 1102 12205 24731 19857 19857 1 9606 Homo sapiens 0.02075612465762333 IFTIESTR Unmodified 965.5182 0.51819605 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 7.5 0.5 1 1 51.784 51.859 2 3.7428E-06 14389 20230619_1887_Aki_TMTPro18x_K_F7 193.96 161.35 524290 446610 497420 535990 505150 560600 577550 546640 648670 658640 654520 690750 705120 565380 649770 766570 723020 748030 484720 409580 507920 534330 526150 564770 580320 562540 657260 660560 673760 695530 715260 598100 666410 765690 691240 710590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 669500000 12907 3881 12206 24732;24733 19858;19859 19858 2 9606 Homo sapiens 0.03405767551896588 IFTMAEVYGIR Unmodified 1298.6693 0.66929373 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 3 0 1 63.209 63.239 3 4.7345E-08 19784 20230619_1882_Aki_TMTPro18x_K_F3 169.65 152.63 16086 13757 14847 15430 12549 19649 14383 15704 18826 16612 15207 17451 16213 15255 17815 17274 16989 19104 14869 12608 15160 15502 13324 19446 14540 16336 18783 16774 15838 17594 16602 15912 18040 17431 16277 18118 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49425000 12908 4386 12207 24734 19860 19860 1 9606 Homo sapiens 0.03190585868242124 IFTSIGEDYDER Unmodified 1443.6518 0.65178899 2035 Q6FHP5;A8K401;P35232;Q6PUJ7;Q53FV0;C9JZ20;C9JW96;E7ESE2;E9PCW0;P35232-2 PHB;HEL-S-54e Prohibitin yes no 0 0 0 2.5 1.12 1 1 1 1 57.501 57.518 2 2.0372999999999998E-72 17469 20230619_1880_Aki_TMTPro18x_K_F1 315.91 253.45 556910 464590 509080 598420 563820 640400 674900 675820 687920 697270 707300 721630 821090 698120 616740 777260 703090 811240 514660 426410 522610 593810 584390 645080 674400 688520 701090 704220 729700 730770 824670 725170 636430 781260 672630 769770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1320500000 12909 2035 12208 24735;24736;24737;24738 19861;19862;19863;19864 19861 4 9606 Homo sapiens -0.05229082923688111 IFVGGIKEDTEEHHLRDYFEQYGK Unmodified 2909.3984 0.39842185 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;A0A7I2YQX9;F8VZ49;Q32P51;A0A024QZ98;A0A2R8Y4L2;F8VTQ5;A0A7I2V5U9 HNRNPA1;HNRPA1;hCG_2020860;HNRNPA1L2;RP11-78J21.1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 2 7 0 1 82.844 82.848 6 0.067546 25400 20230619_1887_Aki_TMTPro18x_K_F7 35.973 32.51 1714.9 3344.2 2256.1 2425.7 1772 1390.9 1884.5 1684.3 2311.8 1819.9 1628.6 0 1698.3 1561.5 3313.1 2190.4 1521.1 1898.7 1603.6 3048.8 2239.5 2516.2 1876.5 1498.2 1907.4 1705.7 2302.8 1779.6 1698.7 0 1807.3 1593.8 3235.7 2177.9 1475.3 1805.1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 831160 12910 640 12209 24739 19865 19865 1 9606 Homo sapiens 0.020098572050756047 IFVGGIKEDTEEYNLR Unmodified 1881.9472 0.94724273 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;P51991-2;B4DDB6;B4E3E6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 1 5.6 1.02 1 1 2 1 56.609 56.675 3;4 1.0867E-14 16429 20230619_1887_Aki_TMTPro18x_K_F7 185.95 150.74 1004300 823420 950770 1073600 973460 1047300 1100900 1104600 1029300 1244400 1234000 1012600 1147900 850500 1323300 869500 788410 571730 928250 755890 971370 1063200 1012200 1062300 1100800 1128200 1061800 1242300 1251800 1032900 1180800 883950 1310400 858700 758020 546980 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 13380000000 12911 1469;2450 12210 24740;24741;24742;24743;24744 19866;19867;19868;19869;19870 19870 5 9606 Homo sapiens 0.041547001442950204 IFVGGIPHNCGETELR Unmodified 1797.8832 0.88320269 1118 K7EQ55;K7EK33;A0A0S2Z569;Q96EP5-2;Q96EP5;K7EQ02;Q5IRN2 DAZAP1;DAZAP1/MEF2D fusion DAZ-associated protein 1 yes no 0 0 0 6.5 0.5 1 1 49.965 50.044 3 4.5743E-43 13916 20230619_1886_Aki_TMTPro18x_K_F6 285.58 254.58 497070 392190 493070 560800 481120 494630 548180 537970 564060 668870 589850 580390 671780 561440 576910 764190 645650 674780 459500 360450 501400 551480 502100 506200 549460 550200 575530 666050 607510 592770 678490 590500 593160 759100 617290 641750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1561799999.9999998 12912 1118 12211 24745;24746 19871;19872 19871 2 9606 Homo sapiens 0.016176415063227978 IFVGGLNPEATEEK Unmodified 1502.7617 0.76167379 4406 Q99729-3;D6R9P3;D6RD18;B4DMY3;D6RBZ0;Q53F64;Q99729-2 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 4.5 0.5 2 2 58.737 58.766 2;3 1.6303999999999999E-28 17363 20230619_1885_Aki_TMTPro18x_K_F5 257.13 208.49 253000 204460 249500 263100 233560 282950 283230 253930 305340 325970 332090 374380 398960 334810 338080 371240 386500 409600 233890 187680 253630 261120 245380 283890 283380 263490 311050 327060 342680 376370 402150 348660 347710 374550 369490 388550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5346400000 12913 4406 12212 24747;24748;24749;24750 19873;19874 19873 2 9606 Homo sapiens 0.030403424154656022 IFVGGLSPDTPEEK Unmodified 1487.7508 0.75077476 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;D6RAF8;B4E0W4;D6RF44 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 4.83 1.77 1 1 1 2 1 58.545 58.604 2;3 1.3728999999999998E-21 17570 20230619_1886_Aki_TMTPro18x_K_F6 267.85 222.42 156640 125080 140410 154030 135750 163690 158020 148780 162260 185370 171280 164600 186060 159910 169810 199870 183520 197150 144690 114770 144010 153290 142100 164430 158190 154030 165580 184730 175930 167920 188670 167240 173890 199970 175550 187230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1193400000 12914 759 12213 24751;24752;24753;24754;24755;24756 19875;19876;19877;19878;19879 19878 5 9606 Homo sapiens 0.026409400411921524 IFVGNVSAACTSQELR Unmodified 1750.8672 0.86721827 1111 A0A0S2Z4Z0;Q96PK6;A0A0S2Z567;Q96PK6-2;A0A0A6YYI9;A0A0S2Z5V2;F8WDX3;A0A0A0MSL8;B8ZZ74;Q96PK6-3;Q96PK6-4 RBM14;RBM14-RBM4 RNA-binding protein 14 no no 0 0 0 4.5 3.5 1 1 54.423 54.456 3 1.3454E-14 16198 20230619_1880_Aki_TMTPro18x_K_F1 180.27 168.48 883770 735880 821170 867890 738090 908250 884850 875330 866520 1009300 1009500 921050 972010 780170 978980 942640 857570 825710 816810 674810 838520 866320 777840 914520 883500 900140 890120 1009800 1027000 934340 992910 818130 988480 938400 821470 785620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 445920000 12915 1111 12214 24757;24758 19880;19881 19880 2 9606 Homo sapiens 0.02181935269436508 IFVHYPR Unmodified 930.50757 0.50757178 3138 J3KTF5;Q9BQ95;K7EN32;Q9BQ95-4;Q9BQ95-2;K7EIK2;K7EJI1;K7EPL5 ECSIT Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial yes no 0 0 0 4 0 1 43.361 43.405 3 0.0020001 10966 20230619_1883_Aki_TMTPro18x_K_F4 117.56 64.925 23467 18862 24792 25875 23923 32229 26913 25556 37529 27276 24587 23834 28756 23082 31952 26914 25210 25261 21707 17326 25076 25626 25059 31934 27280 26617 37094 27403 26024 24328 29357 24046 32034 26912 24187 24010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13255000 12916 3138 12215 24759 19882 19882 1 9606 Homo sapiens 0.03953829688123278 IFVNDDR Unmodified 877.42938 0.42938104 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;Q59GP7;K7EKJ9;K7ERM6;K7EJ09;K7ER69;K7EM82;K7ENK6 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 3 0.816 1 1 1 44.569 44.635 2 0.0045758 11659 20230619_1882_Aki_TMTPro18x_K_F3 147.34 101.62 694520 481270 600350 686280 680080 843480 754510 662290 912880 775650 915880 954950 948840 786130 814280 880770 947270 982010 640870 442540 619570 677810 703270 836410 761030 692540 920560 783770 941120 955480 960870 821610 838080 889100 905300 931520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 950020000 12917 3823 12216 24760;24761;24762 19883;19884 19883 2 9606 Homo sapiens -0.014236476877727 IFYPEIEEVQALDDTER Unmodified 2065.9844 0.9844161 3541 P33316-2;H0YNW5;P33316;H0YKC5;A0A0C4DGL3 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes no 0 0 0 2.5 1.12 1 1 1 1 63.938 63.95 3 1.7757E-48 20383 20230619_1881_Aki_TMTPro18x_K_F2 283.1 270.44 284230 213180 247120 265440 172470 245920 249100 230510 277430 318990 301960 300190 323000 281990 265030 365230 338370 302970 262400 195670 253160 263520 187660 249700 247680 239040 282190 317050 309510 305030 326350 295760 275110 361930 322790 288550 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 596800000 12918 3541 12217 24763;24764;24765;24766 19885;19886;19887;19888 19887 4 9606 Homo sapiens -0.005936731005931506 IFYPETTDIYDR Unmodified 1531.7195 0.71947463 707 P46940;A4QPB0;A0A024RC65;A0A0J9YXZ5;Q6P1N4;Q05DN7;Q5FWG8 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 4.5 0.5 1 1 59.403 59.405 2 7.9121E-05 18114 20230619_1883_Aki_TMTPro18x_K_F4 121.6 97.854 17289 14818 21176 18080 16245 22091 23141 21036 25264 20675 22493 21960 26735 25184 22060 24272 25653 28964 16022 13591 21104 18053 17469 21999 22998 21557 25489 20972 23390 22354 26949 25822 22725 24663 24533 27449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52585000 12919 707 12218 24767;24768 19889;19890 19889 2 9606 Homo sapiens -0.02511632992923296 IFYPETTDIYDRK Unmodified 1659.8144 0.81443765 707 P46940;A4QPB0;A0A024RC65;A0A0J9YXZ5;Q6P1N4;Q05DN7;Q5FWG8 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 1 7 0 1 55.076 55.137 3 6.3067E-06 15773 20230619_1887_Aki_TMTPro18x_K_F7 124.33 98.681 122640 114190 123750 120350 117080 123510 130770 129800 117610 157350 159390 128350 144180 124070 168380 142910 132740 130800 113500 104560 125490 121160 122400 124880 130740 132890 122380 156570 160770 131540 148710 129130 168690 142740 127330 124370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 389240000 12920 707 12219 24769 19891 19891 1 9606 Homo sapiens 0.010923004782625867 IFYPETTDVYDRK Unmodified 1645.7988 0.79878758 627 B7Z7U6;F5H7S7;A0A024RAJ8;Q13576;D6R939 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes no 0 0 1 6 0 1 53.207 53.284 3 0.028883 15305 20230619_1886_Aki_TMTPro18x_K_F6 53.136 35.925 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12921 627 12220 24770 19892 19892 1 9606 Homo sapiens 0.001720139611961713 IGAADYQPTEQDILR Unmodified 1688.837 0.836964 1253 A0A142CHG9;P09471-2;P09471;Q8N6I9;B3KP89;H3BTM2;A0A1W2PP38 GNAO1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 3.5 0.5 1 1 54.221 54.253 2 1.3449999999999998E-52 16040 20230619_1882_Aki_TMTPro18x_K_F3 314.07 275.5 204240 167410 198200 219780 152190 175640 169660 184350 189030 232120 267620 288790 258350 259570 272490 285070 290910 327050 188810 153690 201240 217050 162280 181150 170890 189110 194720 233650 270680 289580 264890 269900 277940 288380 278410 310050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 697010000 12922 1253 12221 24771;24772 19893;19894 19893 2 9606 Homo sapiens 0.020098998758840025 IGADEEIDDFK Unmodified 1250.5667 0.56666238 4120 Q6P392;Q8WUA2;B3KRR4;Q32Q83 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes no 0 0 0 1 0 1 55.769 55.769 3 0.0015321 16788 20230619_1880_Aki_TMTPro18x_K_F1 69.672 46.352 36930 27347 32993 30941 32490 32143 35554 34502 42081 38269 44163 39363 41227 33938 42604 39217 41222 39099 34098 25079 33817 30990 33858 32486 35879 35187 42563 38511 45058 39744 42221 35471 43203 39334 39439 37146 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28213000 12923 4120 12222 24773 19895 19895 1 9606 Homo sapiens -0.04859828389544418 IGADFLAR Unmodified 861.47085 0.47085192 1234 Q2TU84;A0A140VK69;P17174;P17174-2;B7Z1I2 GIG18;GOT1 Aspartate aminotransferase;Aspartate aminotransferase, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 53.029 53.102 2 0.0038942 14884 20230619_1888_Aki_TMTPro18x_K_F8 118.05 41.917 585800 490930 519690 558210 470420 544090 522850 517000 584310 624290 602130 632830 640500 575050 611560 707140 688160 721760 541250 450020 532880 558150 494350 550770 526260 533060 592860 625400 618920 640060 651390 601980 627160 709030 657920 685250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 328700000 12924 1234 12223 24774;24775 19896;19897 19897 2 9606 Homo sapiens 0.03457533071571106 IGAEVYHHLK Unmodified 1165.6244 0.62439245 3448 P13929-3;P13929-2;P13929;K7EPM1;K7EKN2;B4DUJ6;E5RGZ4;D3DTL4 ENO3 Beta-enolase;Enolase yes no 0 0 0 8 0 1 43.619 43.629 4 0.00029752 10958 20230619_1888_Aki_TMTPro18x_K_F8 105.86 82.012 45597 30089 42078 58154 54128 46957 46772 46995 60352 67963 70347 74039 67022 60780 60659 86973 77200 75896 42084 27788 43293 56204 55002 48334 48017 48598 61162 67731 71574 74450 68248 64476 62855 86278 73695 72209 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41500000 12925 3448 12224 24776 19898 19898 1 9606 Homo sapiens 0.04820523117200537 IGAEVYHNLK Unmodified 1142.6084 0.60840804 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2;K7EM90;A4UCS8 ENO1 Alpha-enolase;Enolase yes no 0 0 0 4.2 2.79 1 1 1 1 1 47.654 47.714 3 9.6586E-06 12512 20230619_1888_Aki_TMTPro18x_K_F8 153.12 105.56 1996900 1457200 1632500 1818500 1950700 1810300 2022300 1941900 2105900 2271200 2416700 2298200 2550500 2088800 2111100 2857300 2520300 2314000 1842400 1337700 1694200 1806900 2000900 1835300 2037500 1983900 2154200 2278100 2469700 2326400 2577600 2201700 2181100 2826500 2406000 2204300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 56951000000 12926 293 12225 24777;24778;24779;24780;24781 19899;19900;19901;19902 19902 4 9606 Homo sapiens 0.04280816880304883 IGAFGYMECSAK Oxidation (M) 1348.5792 0.5791581 220 P61586;A0A024R324;B4DKN9;Q9BVT0;A0A7I2YQV1;A0A0B6XK12 RHOA;ARHA Transforming protein RhoA yes no 0 1 0 5.33 3.09 1 1 1 52.026 52.077 2;3 0.00014583 15213 20230619_1880_Aki_TMTPro18x_K_F1 99.283 90.553 101930 85655 90617 108330 102510 98777 99047 93267 99699 114820 119670 111090 126180 108240 119330 125730 113560 116720 94178 78599 93251 107390 105340 100540 100120 96294 102420 114760 122090 112890 128220 112660 121180 125560 108730 110940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 172240000 12927 220 12226 24782;24783;24784 19903;19904 19903 131 2 9606 Homo sapiens -0.08118831522506298 IGAFGYMECSAK Unmodified 1332.5842 0.58424348 220 P61586;A0A024R324;B4DKN9;Q9BVT0;A0A7I2YQV1;A0A0B6XK12 RHOA;ARHA Transforming protein RhoA yes no 0 0 0 4.5 3.5 1 1 57.402 57.428 2;3 1.9655E-06 16723 20230619_1888_Aki_TMTPro18x_K_F8 173.32 156.75 180570 135420 149710 148820 126230 157940 154290 144330 146460 192560 191000 180890 212990 169060 196190 202590 197680 191680 166640 124150 154300 149380 133910 158720 153790 149710 151640 191600 194790 183790 215760 176620 199900 202440 189090 182190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 484600000 12928 220 12226 24785;24786 19905;19906 19906 2 9606 Homo sapiens -0.0687452765987473 IGALEGYR Unmodified 877.46577 0.46576654 3265 O43776;K7EIU7;K7EPK2;B4DF91;B4DGT6;O43776-2;K7EMQ6;K7EQ35 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 0 7 0.816 1 1 1 47.956 48.031 2 0.0024133 12666 20230619_1887_Aki_TMTPro18x_K_F7 127.12 52.702 387780 313620 348310 380730 392830 412430 421590 404400 456240 415720 455650 473490 445020 356370 427360 490540 501330 460890 358240 287700 357960 379420 405200 414550 424460 414090 462690 421270 467220 474160 453630 378560 439290 488950 478680 438220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 320090000 12929 3265 12227 24787;24788;24789 19907;19908 19908 2 9606 Homo sapiens 0.022132292089509065 IGAWHPAR Unmodified 906.48242 0.48241966 2399 B3KS36 yes yes 0 0 0 3 0 1 37.956 38.009 3 0.0011115 8753 20230619_1882_Aki_TMTPro18x_K_F3 117.93 88.596 83010 54425 74530 78443 95990 108650 104030 86129 111680 57045 60414 56718 61127 48457 74523 57476 68024 55285 76597 50065 76782 77596 98256 107010 104560 88813 111120 59328 64453 57355 62998 50749 75084 57552 65059 52580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31926000 12930 2399 12228 24790 19909 19909 1 9606 Homo sapiens 0.025437748855438258 IGCLLSGGLDSSLVAATLLK Unmodified 1987.1024 0.10236317 3409 P08243-2;P08243;P08243-3;B4DY32;F8WEJ5 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 5 0 1 66.808 66.85 3 4.2047E-10 20913 20230619_1885_Aki_TMTPro18x_K_F5 121.27 101.16 10152 9167.9 10248 6497.9 5859.6 8868.2 8684.3 8606.6 7335.4 11583 13675 14427 13081 12992 13121 11919 12945 16022 9394.1 8372.4 10315 6833.7 6523.5 8787.1 8564.6 8887.5 7811.6 11624 13714 14461 13379 13388 13326 12230 12409 15163 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81653000 12931 3409 12229 24791 19910 19910 1 9606 Homo sapiens 0.14829607954357016 IGDEDVGR Unmodified 859.40356 0.40356022 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45;A0A7P0T7U3 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 0 0 1 0 1 37.172 37.172 2 0.00077368 8818 20230619_1880_Aki_TMTPro18x_K_F1 156.4 103.24 296060 142740 373840 344900 492800 509070 409730 471770 437850 292210 489080 602030 430940 417550 494580 187320 609810 544630 273650 132570 374860 333520 499720 501040 419090 479590 445800 314420 497780 590070 445110 424700 506360 213010 581890 513750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1201600000 12932 1716 12230 24792 19911 19911 1 9606 Homo sapiens -0.031765419300313624 IGDELDSNMELQR Unmodified 1518.6984 0.69842161 1014 K4JQN1;A0A0C4MW46;A0A0C4MWS3;A0A0C4MVT1;Q07812-5;Q07812-7;Q07812-8;Q07812;Q07812-2 BAX;Bax Apoptosis regulator BAX yes no 0 0 0 2 0 1 53.108 53.141 2 0.0020632 15804 20230619_1881_Aki_TMTPro18x_K_F2 94.191 74.43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12933 1014 12231 24793 19912 19912 1 9606 Homo sapiens -0.040179663640856234 IGDEYFTFITDCK Unmodified 1607.7178 0.71776007 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 5.5 1.12 1 1 1 1 63.557 63.59 3 5.6843E-16 19461 20230619_1887_Aki_TMTPro18x_K_F7 184.03 165.62 270320 194360 218720 239080 140790 248520 224590 232350 302270 292230 263240 314160 386540 355950 216470 516130 441040 552350 249370 178400 225530 237900 155670 249980 224040 240100 302100 292970 277440 319670 383020 374230 237210 517060 420590 523830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 576040000 12934 2435 12232 24794;24795;24796;24797 19913;19914 19914 2 9606 Homo sapiens -0.061790100731741404 IGDEYFTFITDCKDPK Unmodified 1947.8924 0.89242997 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 1 6 0 1 61.885 61.938 3 0.036408 18944 20230619_1886_Aki_TMTPro18x_K_F6 48.177 34.162 31464 26974 34262 30591 28408 32148 33465 32441 27012 31776 36352 26514 25706 24061 40204 23751 23565 20617 29124 24724 34461 30639 30082 32403 33277 33105 28258 31972 36358 27093 27249 24874 39618 23759 22687 19626 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7379100 12935 2435 12233 24798 19915 19915 1 9606 Homo sapiens -0.0436005471867702 IGDFIDVSEGPLIPR Unmodified 1626.8617 0.86172219 4631 Q9NYK5-2;Q9NYK5;C9JG87 MRPL39 39S ribosomal protein L39, mitochondrial yes no 0 0 0 5.5 0.5 1 1 63.94 63.986 3 2.432E-05 19929 20230619_1886_Aki_TMTPro18x_K_F6 101.62 75.685 32261 27763 28401 24421 31256 32592 31823 32963 38165 34620 30026 37639 37621 36428 32533 42013 38927 45659 29811 25394 29187 25083 32258 32372 32251 33678 38214 35001 31575 38016 37956 37897 33578 42304 37230 43304 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171530000 12936 4631 12234 24799;24800 19916 19916 1 9606 Homo sapiens 0.07336579749267003 IGDGMNAYVAYK Unmodified 1300.6122 0.61217279 3862 Q59GU6;Q53HL9;Q53GY8;Q13596;Q13596-3 SNX1 Sorting nexin-1 yes no 0 0 0 8 0 1 55.954 56.016 2 0.0044032 16146 20230619_1888_Aki_TMTPro18x_K_F8 100.48 63.001 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12937 3862 12235 24801 19917 19917 1 9606 Homo sapiens -0.026108814081226228 IGDPLLEDTR Unmodified 1127.5823 0.58225287 2459 B4DE91;P49189;B4DX14;P49189-3;P49189-2;B4DYY1 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 2.5 0.5 1 1 52.992 53.038 2 2.9537E-07 15767 20230619_1881_Aki_TMTPro18x_K_F2 190.02 90.214 256610 207380 217040 265070 285350 330470 302690 281620 311260 302490 289940 339330 338360 292010 343780 351710 355730 391080 236960 190340 225140 263680 291630 328020 304330 291690 315910 305760 301070 341080 344110 305970 350190 354660 340480 370910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195350000 12938 2459 12236 24802;24803 19918 19918 1 9606 Homo sapiens 0.023565029181781938 IGDQEFDHLPALLEFYK Unmodified 2034.0098 0.0098429899 3590 P46109 CRKL Crk-like protein yes yes 0 0 0 7 0 2 63.941 63.97 3;4 0.00020478 19611 20230619_1887_Aki_TMTPro18x_K_F7 84.493 46.714 149990 128560 150500 140040 124510 148940 133300 136790 157020 171840 166060 166980 181690 165900 166130 200400 187240 214760 138730 117800 152380 140680 131750 149690 134740 141510 159100 171650 170650 169730 184290 172980 170570 201520 179140 203730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 234330000 12939 3590 12237 24804;24805 19919;19920 19919 2 9606 Homo sapiens 0.03419846212477751 IGDTSVSYK Unmodified 968.48148 0.48147619 3482 P20700;B4DZT3 LMNB1 Lamin-B1 yes no 0 0 0 6.67 0.471 1 2 46.259 46.345 2;3 0.00055895 11900 20230619_1887_Aki_TMTPro18x_K_F7 151.97 98.508 866810 560040 715530 818360 829260 904640 671410 717740 741190 929480 1119500 1229000 1116800 1075100 887120 1137100 1490200 1292500 799300 515280 741540 805800 848580 903800 689060 752030 767010 936920 1131100 1228500 1130300 1116700 940650 1149700 1418600 1226700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 978910000 12940 3482 12238 24806;24807;24808 19921;19922;19923 19923 3 9606 Homo sapiens -0.004025290646609392 IGDVVGSSGANQQTSGK Unmodified 1603.7802 0.7801774 4702 Q9Y263;E5RIM3;H0YBW4 PLAA Phospholipase A-2-activating protein yes no 0 0 0 6 0 1 45.875 45.961 3 9.6767E-05 12102 20230619_1886_Aki_TMTPro18x_K_F6 91.1 70.147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12941 4702 12239 24809 19924 19924 1 9606 Homo sapiens 0.002438523193632136 IGEEFLTDLSQLK Unmodified 1491.7821 0.78207489 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 7 0 1 65.205 65.232 3 5.4612E-08 20192 20230619_1887_Aki_TMTPro18x_K_F7 156.36 109.88 71822 55809 71287 81986 63179 77928 72220 86205 102080 95345 107580 136030 118000 125850 103820 147690 145750 182700 66387 51312 72408 80567 66629 79250 73273 87734 102490 97119 110750 135890 119660 131220 108400 149870 139310 173020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111580000 12942 3432 12240 24810 19925 19925 1 9606 Homo sapiens 0.055855130752888726 IGEEQSAEDAEDGPPELLFIHGGHTAK Unmodified 2846.3359 0.33588117 2910 E9PC52;Q6FHQ0;Q16576;Q16576-2;A8K6A2;Q5JNZ6 RBBP7 Histone-binding protein RBBP7 yes no 0 0 0 2.5 0.5 1 1 54.43 54.465 4 1.4244E-28 16108 20230619_1882_Aki_TMTPro18x_K_F3 175.07 163.11 182300 150720 178440 177750 148770 173300 188330 175370 215180 226340 215420 208020 232280 180780 220620 247320 228980 232020 168550 138210 181150 177290 158030 175650 188450 180430 217800 225440 221720 211130 235860 190970 225160 246520 219030 220520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 435700000 12943 2910 12241 24811;24812 19926 19926 1 9606 Homo sapiens -0.013433336537673313 IGEEQSPEDAEDGPPELLFIHGGHTAK Unmodified 2872.3515 0.35153123 3814 Q09028-3;Q09028-2;Q09028;Q09028-4;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0 RBBP4 Histone-binding protein RBBP4 yes no 0 0 0 3 0.816 1 1 1 54.529 54.558 4 4.1974E-49 16193 20230619_1882_Aki_TMTPro18x_K_F3 219.22 206.67 983250 813480 857730 866420 796090 1384700 858410 821610 1769900 1159500 1107700 1084300 1210900 997110 958410 1438400 1257200 1309500 908280 745300 881410 877250 839830 1347000 889390 887090 1723200 1153800 1171300 1101800 1221100 1054800 998210 1429600 1200400 1245000 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 4002699999.9999995 12944 3814 12242 24813;24814;24815 19927;19928;19929;19930;19931 19928 5 9606 Homo sapiens -0.009750471366714919 IGEGTYGVVYK Unmodified 1184.6077 0.60773933 56;653 A0A024QZP7;Q5H9N4;P06493;I6L9I5;A0A024QZJ8;P06493-2;E5RIU6;B7Z3D6;G3V317;A0A024RB77;G3V5T9;P24941;A0A024RB10;P24941-2;E7ESI2;B4DDL9;A0A024R8R3;Q00526 CDC2;DKFZp686L20222;CDK1;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 no no 0 0 0 7.5 0.5 1 1 52.824 52.896 2 4.4675E-06 14789 20230619_1888_Aki_TMTPro18x_K_F8 186.78 86.969 206000 184940 201760 204610 209940 260790 242820 238940 241350 303770 289500 279080 338180 265760 245220 361790 317020 289970 190570 169450 205500 205820 218480 258930 242940 247270 248240 302690 296730 284130 339070 279670 255590 357660 302440 276280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363410000 12945 56;653 12243 24816;24817 19932 19932 1 9606 Homo sapiens 0.022819774406116267 IGEHMEEHGIK Oxidation (M) 1294.5976 0.59758535 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 1 0 3 0.816 1 1 1 33.704 33.762 4 5.2179E-06 7151 20230619_1881_Aki_TMTPro18x_K_F2 147.28 124.36 222310 141180 210360 210550 300090 304590 241240 263690 312740 265200 310030 298020 305660 283240 247010 280400 353900 315310 205190 129940 215980 208070 302980 299890 248910 272100 314360 269100 317840 300600 309570 292440 258270 283710 337300 299250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 264790000 12946 682 12244 24818;24819;24820 19933;19934 19933 418 2 9606 Homo sapiens -0.03792953556262546 IGEHMEEHGIK Unmodified 1278.6027 0.60267073 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 0 3.5 0.5 1 1 38.068 38.116 4 4.7531E-05 8801 20230619_1882_Aki_TMTPro18x_K_F3 136.81 104.28 532490 345980 448320 458220 560220 697910 504390 529910 779500 696860 696000 679580 807600 663510 548480 817380 846470 745180 491100 317970 464220 456470 572980 683390 520260 557090 775290 695340 722340 690350 808580 693140 580170 814100 806310 708920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 490590000 12947 682 12244 24821;24822 19935;19936;19937 19936 3 9606 Homo sapiens -0.02548649693653715 IGEHMQTK Oxidation (M) 958.45422 0.45421558 309 Q5CZ83;B4DZC2;Q9Y4Q3;B4DZ41;B7Z926;A0A024R4W4;Q86X06;A0A024R4V5;O95696;O95696-2 DKFZp686F0325;DKFZp434B094;BRD1 Bromodomain-containing protein 1 yes no 0 1 0 5 0 1 31.275 31.353 3 0.067428 6160 20230619_1885_Aki_TMTPro18x_K_F5 48.796 22.282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12948 309 12245 24823 19938 19938 189 1 9606 Homo sapiens -0.026673358766856836 IGEHTPSALAIMENANVLAR Unmodified 2106.0892 0.089172718 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;A0A0M4FNU3;H3BR04;H3BU78;A4UCS9;A4UCT0 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 4.5 3.5 1 1 60.508 60.526 3 4.6144E-94 18707 20230619_1880_Aki_TMTPro18x_K_F1 341.3 311.7 312320 211500 213240 303280 264920 280780 276490 265620 266070 367920 355560 389420 346000 297040 392400 388350 368930 481740 287720 194510 226160 298210 271490 285270 277820 275270 275710 366740 360570 391030 355590 314430 396940 393970 354000 456150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2221000000 12949 3378 12246 24824;24825 19939;19940;19941 19939 3 9606 Homo sapiens 0.08037169894987528 IGEHTPSALAIMENANVLAR Oxidation (M) 2122.0841 0.084087341 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;A0A0M4FNU3;H3BR04;H3BU78;A4UCS9;A4UCT0 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 1 0 7.2 0.748 1 2 2 51.499 51.575 3 1.9814E-22 14560 20230619_1886_Aki_TMTPro18x_K_F6 173.87 159.18 136270 123470 131640 151500 151750 172700 161920 146630 182130 161030 180260 179560 178630 156360 175300 191130 187530 199310 126050 113230 134550 150930 156360 172420 163250 152050 184260 162610 184980 180710 182250 163870 179090 191930 179390 189180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2536000000 12950 3378 12246 24826;24827;24828;24829;24830 19942;19943;19944;19945;19946 19942 1984 5 9606 Homo sapiens 0.06792866032401434 IGELFSK Unmodified 792.43815 0.43815481 3758 P78527;P78527-2;B4DL41;F5GX40 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4.5 3.5 1 1 58.714 58.735 2 0.018139 17273 20230619_1888_Aki_TMTPro18x_K_F8 112.17 18.909 481920 376860 413470 450250 426430 479910 495070 489380 518960 550760 548880 557570 617910 483050 535770 648910 575460 608030 444970 345710 426160 449140 443940 483280 495980 500940 528820 553410 564830 563350 624260 509650 549080 646800 550440 577820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1534299999.9999998 12951 3758 12247 24831;24832 19947;19948 19948 2 9606 Homo sapiens 0.033633259487032774 IGEYLEK Unmodified 850.44363 0.44363412 2126 A8K8U1;Q86VP6;Q86VP6-2;H0YH27;Q86VP6-3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 5.5 0.5 1 1 53.159 53.231 2;3 0.026049 15329 20230619_1886_Aki_TMTPro18x_K_F6 87.616 16.32 57443 43098 43135 47647 44773 44918 50573 52504 59027 79082 65042 63497 83045 67160 43392 120350 124380 94686 52979 39514 45052 47735 46543 45837 50929 53803 60028 77994 67170 65394 82386 71964 49704 118390 118020 90314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34740000 12952 2126 12248 24833;24834 19949;19950 19950 2 9606 Homo sapiens 0.012430047405132427 IGFDVVTLSGTR Unmodified 1263.6823 0.68230126 4063 Q5TDE9;Q9BSD7;Q5TDF0 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase yes no 0 0 0 2 0 1 60.785 60.796 3 0.00010621 18924 20230619_1881_Aki_TMTPro18x_K_F2 110.31 87.618 19190 17729 20945 23266 21750 26715 22460 22461 26570 26062 24096 24557 29784 23467 25775 28489 31514 29135 17773 16269 21160 23078 22569 26646 22735 23337 26753 26108 25092 24962 30022 24522 26610 28576 30080 27674 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9170800 12953 4063 12249 24835 19951 19951 1 9606 Homo sapiens 0.06100740251986281 IGFFNQQYAEQLR Unmodified 1612.7998 0.79979063 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 1.5 0.5 1 1 60.305 60.311 2 6.773099999999999E-36 18735 20230619_1881_Aki_TMTPro18x_K_F2 281.41 252.69 92361 79538 83723 88021 72335 83486 84688 81380 90357 79908 72200 57927 75481 55137 85649 88187 77205 58265 85365 72885 85619 88170 76415 84741 84865 83269 91002 80189 75020 59803 77357 58730 86458 86413 73820 55727 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97890000 12954 1296 12250 24836;24837 19952;19953 19953 2 9606 Homo sapiens 0.017902731207868783 IGFFQGDIR Unmodified 1051.5451 0.5450795 2140 B7Z3Z9;E7EPM6;P33121;P33121-2;A8K9T3;B4E0R0;P33121-3;H0Y9Z9;A0A994J7S4;D6RER0;Q108N2;Q108N1 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes no 0 0 0 1 0 1 57.433 57.433 2 0.00063852 17470 20230619_1880_Aki_TMTPro18x_K_F1 128.69 71.583 102840 88957 94239 101290 68574 87688 85539 80625 91881 107580 105700 104350 103650 89183 143500 113130 116760 118680 95058 81536 96103 101120 73832 89553 85521 83636 93863 107160 107800 105560 107720 93776 143580 113710 111990 112660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80622000 12955 2140 12251 24838 19954 19954 1 9606 Homo sapiens 0.021368761630810695 IGFPWSEIR Unmodified 1103.5764 0.57637963 3456;2184 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;J7M2B1;Q6PJT4;Q9UK20;Q9UJZ6;Q9UJZ2;Q9UJU1;Q9UJZ7;P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;Q05CU6;Q6PKD3;V9HWC0;P26038;A0A8V8TKR9 EZR;HEL-S-105;EZR-ROS1;MSN;VIL2;RDX;HEL70 Ezrin;Tyrosine-protein kinase receptor;Radixin;Moesin no no 0 0 0 2 0.816 1 1 1 62.233 62.252 2 8.0752E-05 19609 20230619_1881_Aki_TMTPro18x_K_F2 179.21 118.45 965390 919910 1044300 1088700 951060 1196800 1132300 1065600 1162100 1165500 1043400 922150 1246800 881000 1094800 1407300 1159800 1090800 894190 843200 1053400 1087100 1000900 1198800 1132200 1100500 1178200 1165300 1084300 946970 1257700 938560 1121300 1387100 1108600 1039700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 870590000 12956 3456;2184 12252 24839;24840;24841 19955;19956;19957 19956 3 9606 Homo sapiens 0.028734491971590614 IGFSVQPDR Unmodified 1017.5243 0.52434406 2891 E7EMW7;O95071-2;O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 0 0 0 7 0 1 48.086 48.174 2 0.0083522 12711 20230619_1887_Aki_TMTPro18x_K_F7 88.136 22.884 102340 83132 87076 109810 96063 113970 110060 100970 132990 124130 117830 110910 118450 106260 119450 131700 117900 120480 94509 76328 90014 108700 99575 114610 110820 104710 133580 123860 121610 113060 120960 111080 121430 131280 112840 114540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214750000 12957 2891 12253 24842 19958 19958 1 9606 Homo sapiens 0.01628285783431238 IGGDAATTVNNSTPDFGFGGQK Unmodified 2153.0025 0.0025257806 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 6.75 0.829 2 1 1 57.867 57.927 3;4 1.6347E-30 16938 20230619_1887_Aki_TMTPro18x_K_F7 203.56 180.22 208420 174950 200580 207640 191620 214210 225680 217620 255180 250200 249150 251060 276660 242960 244960 297810 269530 305580 192700 160430 204330 207150 200710 216220 226500 222990 258110 251170 257130 254640 280060 253780 251320 298660 257900 290020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 393720000 12958 3197 12254 24843;24844;24845;24846 19959;19960;19961 19960 3 9606 Homo sapiens -0.0278553812595419 IGGDAGTSLNSNDYGYGGQK Unmodified 1972.8763 0.87626263 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 5 0.707 1 2 1 50.381 50.447 2;3 2.9541E-22 14149 20230619_1886_Aki_TMTPro18x_K_F6 170.89 153.52 34294 29369 34609 36498 32391 37946 37428 38653 46850 43477 45450 46102 47956 43019 41507 47204 48213 47072 31723 26942 35112 36296 33984 38273 37747 39567 47132 43770 46805 46577 48578 44687 42721 47350 46057 44715 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1236000000 12959 2644;4322 12255 24847;24848;24849;24850 19962;19963 19963 2 9606 Homo sapiens -0.07126044631195327 IGGDLTAAVTK Unmodified 1044.5815 0.58152458 881 Q96MZ5;A0A087X0Q1;Q7Z739;Q8NA80;A0A024R7W5;B4DPX9;A0A087WY31;Q658Z6;Q8N3V9 YTHDF3;DKFZp451J085;DKFZp451A052 YTH domain-containing family protein 3 yes no 0 0 0 8 0 1 53.903 53.975 2 0.0039243 15257 20230619_1888_Aki_TMTPro18x_K_F8 110.38 65.221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12960 881 12256 24851 19964 19964 1 9606 Homo sapiens 0.061017082691250835 IGGGDTTEHIQTHFESK Unmodified 1855.8701 0.87005504 1061 A0A0S2Q0B1;O14497;O14497-2;H0Y488;A0A1B0GTU5;O14497-3;Q96SM7;Q8NC65;Q96T01 ARID1A AT-rich interactive domain-containing protein 1A yes no 0 0 0 4 0.816 1 1 1 42.407 42.471 4 1.4114E-18 10605 20230619_1883_Aki_TMTPro18x_K_F4 186.72 168.35 68665 52631 71636 71086 70436 86612 76892 77568 92127 91962 105980 104400 104160 83225 82567 103820 99966 110970 63490 48346 72513 70466 73510 86160 77655 80247 93531 92546 107950 104710 105300 87665 85423 104330 95555 105280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189030000 12961 1061 12257 24852;24853;24854 19965 19965 1 9606 Homo sapiens -0.023645180720905046 IGGGGVQLGK Unmodified 884.50797 0.50796571 1512 Q68DY8;Q63HM4;A0A3B3ISU0;A9X9L0;A9X9K9;A8K2P8;B4DLJ5;Q02487-2;Q02487 DKFZp686I11137;DKFZp686P18250;DSC2 Desmocollin-2 yes no 0 0 0 7.5 0.5 2 2 40.54 40.57 2;3 0.0023973 9476 20230619_1887_Aki_TMTPro18x_K_F7 112.17 52.966 509590 262890 557230 516990 376160 467330 382600 390590 390700 468940 671000 677560 421600 400840 526680 482160 1012700 1013300 470480 243170 559000 500230 405510 474100 386490 406830 408470 475700 664480 668820 444030 427490 560230 512780 964220 956830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 607550000 12962 1512 12258 24855;24856;24857;24858 19966;19967 19966 2 9606 Homo sapiens 0.06109204617337127 IGGGIDVPVPR Unmodified 1078.6135 0.61349341 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 7.5 0.5 1 1 52.622 52.694 2 1.38E-08 14706 20230619_1888_Aki_TMTPro18x_K_F8 179.37 147.44 920400 806110 844160 888690 819890 959470 1011600 946130 1092800 1057200 1117400 1150500 1095900 998090 1055100 1217100 1153900 1272700 850860 738610 863930 891980 859240 964700 1011300 970700 1109500 1065300 1144700 1158700 1117800 1045900 1080000 1222200 1103900 1207800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 744510000 12963 3197 12259 24859;24860 19968;19969 19969 2 9606 Homo sapiens 0.07733120742932442 IGGIGTVPVGR Unmodified 1024.6029 0.60292873 1560;3997;1378 Q05639;A0A2U3TZH3;Q59GP5;P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;A0A4D5RAE2;Q96RE1;Q53G89;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;Q504Z0;Q53HR1;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q16577;Q6P082;A0A4D5RAB8;Q14222;Q53GE9 EEF1A2;EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A Elongation factor 1-alpha 2;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 4 2 1 1 1 1 1 1 1 48.875 48.935 2 9.0536E-06 13913 20230619_1881_Aki_TMTPro18x_K_F2 149.57 108.54 6856300 5793200 5859100 6919400 5777500 6195000 6347300 6485000 7135200 8964800 8979300 8313400 9383700 7461100 7433200 10263000 8515800 8579400 6333500 5312800 6039300 6886200 6024600 6328500 6394500 6672100 7306500 8903600 9136700 8444400 9467400 7873000 7668600 10165000 8137800 8166400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 67219000000 12964 1378;1560;3997 12260 24861;24862;24863;24864;24865;24866;24867 19970;19971;19972 19970 3 9606 Homo sapiens 0.09161138088529697 IGGISGIFK Unmodified 890.52255 0.52255314 1830 A0A8V8TMX5;Q9UK59;A0A8V8TMH0;A0A8V8TNX0;A0A8V8TMF7 DBR1 Lariat debranching enzyme yes no 0 0 0 4 0 1 60.595 60.598 3 0.0021162 18565 20230619_1883_Aki_TMTPro18x_K_F4 89.698 73.807 40199 39355 37531 33031 45235 55544 46586 44666 58735 13918 15004 12023 11472 10306 26031 13372 14529 13293 37196 35969 38447 34213 46482 54215 47226 45549 57252 15750 17308 12273 12530 10850 25508 13425 14003 12631 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9413200 12965 1830 12261 24868 19973 19973 1 9606 Homo sapiens 0.07291276765465682 IGGNEGIDVPIPR Unmodified 1335.7147 0.71466402 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 5.5 1.12 1 1 1 1 54.813 54.883 2 1.5975E-12 16154 20230619_1883_Aki_TMTPro18x_K_F4 199.43 165.92 348260 295790 344590 376710 339540 411820 370420 365560 395290 403560 375960 362230 435070 348850 374260 467180 404570 427370 322080 271430 350510 374180 354190 412610 372550 377710 400780 404600 389150 369360 439150 366650 383840 465060 386960 406250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 868450000 12966 2644;4322 12262 24869;24870;24871;24872 19974;19975;19976 19974 3 9606 Homo sapiens 0.06023527654974714 IGGVQQDTILAEGLHFR Unmodified 1852.9795 0.97954591 4405 Q99623;F5GY37;Q99623-2;J3KPX7;B4DW05;A0A976LZI3;A0A7I2V5F0;F5H3X6;F5H2D2;A0A3G2KQ93;F5H0C5 PHB2 Prohibitin-2 yes no 0 0 0 7.5 0.5 1 1 58.929 58.974 3 2.2447E-13 17338 20230619_1887_Aki_TMTPro18x_K_F7 149.37 128.53 931230 678880 611750 560240 595710 714160 547820 756100 681290 1085900 884580 760180 1074900 755570 800060 1254700 924820 808820 858050 621070 647290 578560 620380 711980 558020 777110 697000 1065900 905160 787170 1076800 806270 827790 1226500 882860 773370 2 2 2 2 2 2 1 2 2 1 2 2 2 2 2 2 2 2 5805900000 12967 4405 12263 24873;24874 19977;19978 19977 2 9606 Homo sapiens 0.08717532337914236 IGGVTER Unmodified 730.39735 0.39735263 3406 P07954-2;A0A804HI24;A0A0S2Z4C3;P07954;A0A804HKE6;A0A0S2Z3S9;A0A0S2Z3W2;A0A0S2Z3X6;A0A0S2Z4H0 FH Fumarate hydratase, mitochondrial yes no 0 0 0 4 0.816 1 1 1 36.027 36.091 2 0.01446 7930 20230619_1885_Aki_TMTPro18x_K_F5 112.59 68.186 209240 101670 279510 292770 398050 389580 328760 387540 319640 215120 351470 432400 309560 314640 349430 129250 405800 382040 193530 94765 279910 280850 401530 386200 335420 391320 326950 233240 357960 424560 319520 318620 356460 147790 387550 360270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 251450000 12968 3406 12264 24875;24876;24877 19979;19980 19980 2 9606 Homo sapiens 0.02136984629089511 IGHGGTLDSAAR Unmodified 1153.584 0.5839842 4284 Q8WWH5;B4DZ90 TRUB1 Probable tRNA pseudouridine synthase 1 yes no 0 0 0 5.5 0.5 1 1 32.654 32.713 3 1.0745E-09 6659 20230619_1885_Aki_TMTPro18x_K_F5 172.6 142.41 30035 13425 29529 33817 38883 36345 36089 36049 40277 32364 38321 38794 32810 31147 32300 33727 39043 38053 27690 12484 30198 32465 39523 36530 36677 36757 40689 33110 39172 38832 33667 32504 33234 34092 37284 36101 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30217000 12969 4284 12265 24878;24879 19981 19981 1 9606 Homo sapiens 0.013335567267859005 IGHLLPEEQVYLNQQSGTIR Unmodified 2294.2019 0.20189429 2891 E7EMW7;O95071-2;O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 0 0 0 7 0 1 55.589 55.65 3 3.429E-14 16013 20230619_1887_Aki_TMTPro18x_K_F7 156.13 148.35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12970 2891 12266 24880 19982 19982 1 9606 Homo sapiens 0.10656141892650339 IGHPAPNFK Unmodified 979.52395 0.52395013 1476 A0A384NPQ2;Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5 PRDX1 Peroxiredoxin-1 yes no 0 0 0 2.5 0.957 1 2 2 1 54.792 54.857 3 1.7315E-06 10162 20230619_1881_Aki_TMTPro18x_K_F2 160.75 110.46 5317800 887300 4111500 5238400 5723000 4590900 5151600 4944700 6173500 6014100 6837400 6455300 6896200 5952300 5367800 7928800 6615300 7293700 4883500 856960 4305500 4913600 5792500 4695300 5258300 5058100 6258500 6034700 6981600 6521600 6965000 6259400 5568900 7892500 6322100 6931800 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 21674000000 12971 1476 12267 24881;24882;24883;24884;24885;24886 19983;19984;19985;19986 19984 4 9606 Homo sapiens 0.03336910854227426 IGIEIIK Unmodified 784.50584 0.50584045 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 3.67 3.09 1 1 1 58.028 58.048 2 0.0075954 17660 20230619_1880_Aki_TMTPro18x_K_F1 123.96 11.212 1719600 1334000 1330600 1778000 1410900 1801800 1858600 1802100 2230000 2154800 2021500 2388900 2548600 2168600 1293600 3735100 1733300 2882700 1586600 1225100 1388500 1758600 1474500 1819300 1858700 1850900 2243100 2166300 2107600 2409400 2525200 2325400 1376100 3672600 1662100 2742800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1329800000 12972 272 12268 24887;24888;24889 19987;19988 19987 2 9606 Homo sapiens 0.10496775879528286 IGIFGQDEDVTSK Unmodified 1407.6882 0.6881745 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 0 0 5 0 1 58.105 58.161 2 7.3586E-08 17146 20230619_1885_Aki_TMTPro18x_K_F5 190.15 165.81 26745 22955 22078 28351 19666 26883 23544 25063 29004 28025 33605 30886 36553 27336 31159 35444 39681 34566 24702 21057 22822 28160 20784 27243 23695 25817 29413 28255 34367 31131 36937 28758 32271 35425 37848 32859 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15885000 12973 1076 12269 24890 19989 19989 1 9606 Homo sapiens 0.0006379397298132972 IGIIDGEYVVNPTRK Unmodified 1672.9148 0.91482039 4270 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 1 2 0 1 55.036 55.057 3 6.7215E-14 16638 20230619_1881_Aki_TMTPro18x_K_F2 174.83 136.04 35875 37850 38738 40395 43886 39810 40287 42467 50722 46754 37957 40420 48313 34162 43024 47295 42393 41419 33254 34650 39186 40601 45019 40404 41158 43308 50611 46831 40017 41098 48685 36171 43830 46976 40561 39406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44735000 12974 4270 12270 24891 19990 19990 1 9606 Homo sapiens 0.10527957531940046 IGIIGGTGLDDPEILEGR Unmodified 1823.9629 0.9628928 1161;3805 Q13126-2;Q13126-3;B4DUC8;A0A384ME80;Q13126;Q13126-4;A0A140CZL4;J3QSB7;Q6FHT1;Q6FHP1;A0A140CZL5;Q13126-7;Q13126-6;Q13126-5;A0A140CZL6;F8WES2;Q05DJ2;Q8WV80 MTAP S-methyl-5'-thioadenosine phosphorylase;Purine nucleoside phosphorylase no no 0 0 0 3.5 0.5 1 1 63.136 63.154 2 0.049402 19755 20230619_1882_Aki_TMTPro18x_K_F3 72.089 55.836 10503 9625.5 11154 11714 10010 14353 13448 11481 12781 15928 16114 16897 15214 12896 12972 16815 13912 19656 9724.1 8826.4 11269 11691 10599 14240 13339 12051 13202 15883 16340 16968 15447 13647 13307 16980 13342 18618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29399000 12975 1161;3805 12271 24892;24893 19991 19991 1 9606 Homo sapiens 0.08386986661344054 IGITNHDEYSLVR Unmodified 1515.7682 0.76815616 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 5.5 0.5 1 1 46.92 47 3 6.8875E-28 12475 20230619_1885_Aki_TMTPro18x_K_F5 243.3 208.77 108470 92884 109100 114770 119570 119550 118450 119280 128350 121630 134850 136600 136420 122800 143540 125770 134710 143760 100330 85206 110950 114190 123230 120560 119840 121950 130450 123260 138170 137510 139540 127280 145250 127420 129040 136320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 293370000 12976 1292 12272 24894;24895 19992 19992 1 9606 Homo sapiens 0.03090280366859588 IGIVGLPNVGK Unmodified 1065.6546 0.65462995 3129 J3KQ32;Q9NTK5;B4DK14;Q9NTK5-3;C9JTK6;Q53SW9 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 0 3 0 1 60.696 60.725 3 0.0054288 18702 20230619_1882_Aki_TMTPro18x_K_F3 80.688 55.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12977 3129 12273 24896 19993 19993 1 9606 Homo sapiens 0.12442881782430959 IGKPHTVPCK Unmodified 1135.6172 0.61719858 3457 P15880;Q6IPX5;Q3KQT6;Q8N5L9;H0YEN5;Q8J014;E9PM36;I3L404;E9PMM9;E9PPT0;Q8NI61 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 yes no 0 0 1 4 0.816 1 1 1 38.065 38.128 4 0.0044393 8809 20230619_1882_Aki_TMTPro18x_K_F3 86.898 59.156 479150 406370 463720 450610 533880 540320 533490 499850 634680 520500 401800 342290 503600 368130 407080 492670 511460 346220 443040 372400 473270 452810 548740 538900 540840 513910 631720 519880 427220 356680 505980 385710 421790 484690 487200 331000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2790400000 12978 3457 12274 24897;24898;24899 19994;19995;19996 19995 3 9606 Homo sapiens 0.05481467245135718 IGLDFCK Unmodified 851.42112 0.42112454 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;Q5S4N1;B4E132;B4E010 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 8 0 1 56.051 56.113 2 0.047565 16223 20230619_1888_Aki_TMTPro18x_K_F8 91.906 56.801 272090 215990 254970 281120 232690 305290 298290 262190 305130 224850 205690 173460 241910 170880 213220 277520 252000 215670 251410 198300 260340 278790 245580 305730 297050 269980 306300 227890 217130 178670 244250 182110 219810 273490 240480 205630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 439760000 12979 1018 12275 24900 19997 19997 1 9606 Homo sapiens -0.010529179287345869 IGLETSLR Unmodified 887.50763 0.50763136 4699 Q9Y230;B3KNL2;Q9Y230-2 RUVBL2 RuvB-like 2 yes no 0 0 0 6.5 0.5 1 1 47.812 47.896 2 0.0018696 12593 20230619_1887_Aki_TMTPro18x_K_F7 135.77 43.3 424140 311680 387020 423830 406020 507990 461690 473200 514610 518060 492740 505400 540690 444710 434520 540050 589420 551280 391660 286370 396840 419790 422320 506230 463960 486910 520600 520770 508680 511540 545340 465900 452820 541490 562190 523630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 445820000 12980 4699 12276 24901;24902 19998 19998 1 9606 Homo sapiens 0.05937784897480469 IGLETVGVK Unmodified 914.54368 0.54368251 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7;E9PRI8 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 53.485 53.554 2 4.1293E-06 15038 20230619_1888_Aki_TMTPro18x_K_F8 185.84 106.72 349120 238630 302990 322120 340330 457460 325290 339970 457460 451460 438570 447030 500750 404760 363840 556560 482900 522450 322140 219300 312370 320040 351180 449340 332990 358260 458010 450350 453420 452720 502570 427010 380050 554320 461160 496440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 577750000 12981 682 12277 24903;24904 19999;20000 20000 2 9606 Homo sapiens 0.08299242074338053 IGLEVDRR Unmodified 956.54033 0.54032847 4382 Q96MU7;Q96MU7-2;J3QR07 YTHDC1 YTH domain-containing protein 1 yes no 0 0 1 5.5 0.5 1 1 38.445 38.532 3 0.00038445 8928 20230619_1886_Aki_TMTPro18x_K_F6 130.28 65.027 137500 124510 136140 145830 162490 164820 167570 159760 174690 156300 187330 176270 176770 146630 187620 184520 193390 177740 127220 114140 138850 145800 166690 165170 168880 163500 177980 158770 191120 177140 181240 154230 190890 184470 184870 168950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98026000 12982 4382 12278 24905;24906 20001;20002 20002 2 9606 Homo sapiens 0.060319920203255606 IGLFGGAGVGK Unmodified 974.55492 0.5549159 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 4.25 0.829 1 1 2 58.112 58.155 3 0.0014341 17666 20230619_1882_Aki_TMTPro18x_K_F3 86.624 58.882 73362 61011 74233 72967 67729 84865 79841 83106 97156 87508 81900 91331 91903 81185 87987 96252 94247 100080 67849 55956 75245 72885 71288 84850 80350 85122 97390 88338 85261 92175 93328 84869 89932 96675 90154 94991 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58620000 12983 3391 12279 24907;24908;24909;24910 20003;20004;20005;20006 20003 4 9606 Homo sapiens 0.06662064168483539 IGLINDMVR Unmodified 1029.5641 0.56410038 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 1 0 1 57.928 57.928 2 0.00072212 17661 20230619_1880_Aki_TMTPro18x_K_F1 132.76 72.076 107940 98199 97900 97649 89414 132350 109840 112680 129160 48078 38079 41796 44058 29149 69153 46380 47947 33757 99801 89885 100200 99170 94410 130680 110120 114730 126610 52009 43715 42329 45944 31419 68574 45702 45982 32248 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295680000 12984 3152 12280 24911 20007 20007 1 9606 Homo sapiens 0.050500894624974535 IGLIQFCLSAPK Unmodified 1345.7428 0.74279303 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 5 0 1 63.248 63.294 3 8.2529E-05 19415 20230619_1885_Aki_TMTPro18x_K_F5 97.214 79.483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12985 3622 12281 24912 20008 20008 1 9606 Homo sapiens 0.08375134310722387 IGLIQGNR Unmodified 869.5083 0.50830006 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162;Q7KYX9;A0A0S2Z4A8;F8VP00;P78457 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 3 0 1 44.974 45.047 2 0.0017246 11850 20230619_1882_Aki_TMTPro18x_K_F3 138.07 96.572 451020 372900 401040 428600 412980 459870 453100 432720 484000 463490 542130 532520 537540 444370 522860 591160 640860 598430 416690 341880 411890 428760 429230 462120 455560 444910 493520 468880 553290 534800 548100 469070 538810 591880 611730 568470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 422800000 12986 116 12282 24913 20009;20010 20009 2 9606 Homo sapiens 0.06832624337187099 IGLLDPR Unmodified 782.46504 0.46503826 146 A0A024R1K8;Q15459;Q15459-2;B4E091;H7C1L2 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 8 0 1 51.452 51.529 2 0.062152 14177 20230619_1888_Aki_TMTPro18x_K_F8 74.832 35.613 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12987 146 12283 24914 20011 20011 1 9606 Homo sapiens 0.06510434559902478 IGLPHSIK Unmodified 863.52289 0.52288749 1482 Q14498;Q14498-2;B4E1M7;A0A384NQ03;Q68DD9;B3KWX7;B4DLM0;G3XAC6;Q5QP23;Q5QP22 RBM39;DKFZp781C0423 RNA-binding protein 39 yes no 0 0 0 3 0 1 45.499 45.575 3 0.0001972 12046 20230619_1882_Aki_TMTPro18x_K_F3 144.38 102.72 442740 369190 387470 428660 431600 498900 496900 432380 525400 327980 297790 238240 315170 214890 358900 370960 375720 278850 409020 338500 399190 428930 446820 497620 497750 443720 524030 334770 316810 245650 323010 230890 365140 365070 358650 266180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 354140000 12988 1482 12284 24915 20012 20012 1 9606 Homo sapiens 0.08566696485320335 IGLSDAR Unmodified 730.39735 0.39735263 4336 Q96DI9;Q9BY77;F6VRR5;Q9BY77-2;F8WCX5;Q659C6;B4DSH9;Q6R954;Q8WUT1 POLDIP3;DKFZp434G0310;PDIP46 Polymerase delta-interacting protein 3 yes no 0 0 0 4.5 0.5 1 1 39.47 39.536 2 0.070796 9311 20230619_1885_Aki_TMTPro18x_K_F5 76.833 30.031 112380 81865 100190 103240 133640 138820 118870 123090 162980 115970 138740 138600 140630 118260 121480 121930 162830 138860 103750 75161 103300 102970 135820 137330 122050 126620 162430 118390 143540 138990 142600 122870 126130 123430 155230 131800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191280000 12989 4336 12285 24916;24917 20013 20013 1 9606 Homo sapiens 0.02136984629089511 IGNCPFSQR Unmodified 1077.5026 0.50256276 1305 A0A1U9X8Y4;Q5SRT3;Q53FB0;O00299 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 yes no 0 0 0 1.5 0.5 1 1 42.467 42.507 2 0.00011562 11201 20230619_1880_Aki_TMTPro18x_K_F1 153.08 116.38 542450 378260 422750 455100 545630 562420 643430 643300 753520 555850 506230 435160 561920 425570 389220 676550 631110 483980 500210 347190 441530 454870 559700 562480 646030 648950 751110 563080 532770 447680 563590 452630 413710 664170 600480 462270 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 764700000 12990 1305 12286 24918;24919 20014;20015;20016 20015 3 9606 Homo sapiens -0.03308842236788223 IGNFLNYGSHTGDADGFK Unmodified 1911.8751 0.87514042 1616 Q27J81;Q27J81-2;A0A6Q8PHA2;A0A6Q8PH71;A0A6Q8PHG2;A0A6Q8PGN3;A0A6Q8PF44;A0A6Q8PH25;A0A6Q8PF29;A0A087X118;A0A6Q8PFW4;A0A6Q8PGC7;A0A0A0MQU1;A0A6Q8PHS8;A0A6Q8PH63 INF2 Inverted formin-2 yes no 0 0 0 8 0 2 58.25 58.297 3;4 2.1356999999999998E-21 17077 20230619_1888_Aki_TMTPro18x_K_F8 194.27 169.71 218340 168040 203480 235780 194770 234800 203330 191580 238650 241680 215900 224890 255490 229420 228480 280240 261600 307770 201710 154420 208000 232400 203470 236430 205640 200160 240400 241150 224390 229230 258350 239220 234940 282160 250300 291860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290230000 12991 1616 12287 24920;24921 20017;20018 20018 2 9606 Homo sapiens -0.04432214209464291 IGNSYFK Unmodified 827.41775 0.41775372 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 2.5 0.5 1 1 49.654 49.722 3 0.033452 14305 20230619_1881_Aki_TMTPro18x_K_F2 67.757 43.422 154020 119970 132670 148790 129260 158800 127800 144270 190800 158710 175030 173890 185790 147970 158050 186500 195690 167400 142210 110090 136580 148000 134810 159450 130960 148760 190090 160160 180730 175010 187930 155530 163430 185660 186680 159300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 126950000 12992 2088 12288 24922;24923 20019;20020 20019 2 9606 Homo sapiens -0.002858447110952511 IGNSYFKEEK Unmodified 1213.5979 0.59790293 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 1 7.5 0.5 1 1 46.82 46.888 3 0.004627 12204 20230619_1888_Aki_TMTPro18x_K_F8 73.9 38.248 301400 343880 419250 324540 455780 290000 452600 348540 166480 311210 390560 85072 110670 42414 591850 35801 39322 32881 280280 314420 415830 329470 467630 298090 447910 351250 195000 309070 376850 95858 143540 45291 559830 37724 42919 31285 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 303080000 12993 2088 12289 24924;24925 20021 20021 1 9606 Homo sapiens -0.0003521056478348328 IGNTEDGAPHKEDEPSVGQVAR Unmodified 2305.0935 0.093466053 4481 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 1 3.5 0.5 1 1 40.025 40.074 4 3.9747E-17 9629 20230619_1882_Aki_TMTPro18x_K_F3 164.69 150.08 124160 100220 136450 129820 139450 144820 120570 129060 116470 152860 159470 168900 156580 133230 144140 170800 181630 178730 114890 92003 137550 128880 143970 144970 122690 133560 120800 153600 161540 169500 159330 140600 149010 171390 173400 169690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174230000 12994 4481 12290 24926;24927 20022 20022 1 9606 Homo sapiens -0.006876941484279087 IGNTGGMLDNILASK Oxidation (M) 1518.7712 0.77119262 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 1 0 1 0 1 58.737 58.737 2 0.058503 17975 20230619_1880_Aki_TMTPro18x_K_F1 64.65 49.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12995 161 12291 24928 20023 20023 94 1 9606 Homo sapiens 0.03255787429338852 IGNTGGMLDNILASK Unmodified 1502.7763 0.776278 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 2 0 1 62.639 62.648 3 0.00060324 19823 20230619_1881_Aki_TMTPro18x_K_F2 83.37 64.59 63894 76888 74811 58902 82296 75155 75048 69145 65447 61252 60676 57400 79233 54829 84444 78705 72089 79242 59338 70190 75080 61302 84502 74755 75817 70845 67077 62216 63319 58428 80427 57975 85064 78748 69143 75233 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154380000 12996 161 12291 24929 20024 20024 1 9606 Homo sapiens 0.045000912919704206 IGPLGLSPK Unmodified 880.5382 0.53820321 3530 P30050;Q59FI9;D3DS95;Q76P68 RPL12;hCG_21173;cICK0721Q.2 60S ribosomal protein L12 yes no 0 0 0 3 0.816 1 1 1 55.639 55.662 3 0.00059 16579 20230619_1882_Aki_TMTPro18x_K_F3 109.71 79.46 229270 192170 206850 221440 222140 257330 247230 240360 264680 203960 197950 162290 196560 162560 211210 233260 205370 148840 211860 176170 212340 221740 230340 257090 248310 245750 265850 206950 206020 166930 201350 171330 214300 228510 196170 142470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 794140000 12997 3530 12292 24930;24931;24932 20025;20026 20025 2 9606 Homo sapiens 0.09315563282507355 IGPQQSISTSVGPSASQR Unmodified 1798.9173 0.91733959 4277 Q8WUD1;B4DUD4;Q8WUD1-2 RAB2B Ras-related protein Rab-2B yes no 0 0 0 1.5 0.5 1 1 44.682 44.723 3 7.7011E-05 12039 20230619_1881_Aki_TMTPro18x_K_F2 71.269 54.389 147930 109600 143710 182830 168240 192360 168070 161650 205200 171210 169460 174750 173480 134760 179640 167530 199480 168880 136670 100950 146950 178550 172920 192970 170580 167600 205470 172710 175800 175840 177180 142120 183570 167950 190460 160500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142250000 12998 4277 12293 24933;24934 20027 20027 1 9606 Homo sapiens 0.049837611989232755 IGPYQPNVPVGIDYVIPK Unmodified 1968.072 0.072049316 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;P43243-2;B4DRS1;B3KM87;Q5CZA7;Q9H4N1;Q68E03 MATR3;DKFZp686K23100;DKFZp686K0542;DKFZp686L22104 Matrin-3 yes no 0 0 0 2.5 0.5 2 2 63.192 63.211 3;4 7.0844E-08 20048 20230619_1881_Aki_TMTPro18x_K_F2 120.63 103.68 689920 602230 576850 739020 706940 811640 659390 778640 740280 876450 926310 803690 1040000 854550 856440 1143700 943290 1050600 637350 552370 598300 735830 723370 814410 670620 799940 757830 878160 945630 822060 1048800 895240 880560 1138500 902440 998500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1744799999.9999998 12999 1059 12294 24935;24936;24937;24938 20028;20029 20028 2 9606 Homo sapiens 0.1267361735144732 IGQFVFAR Unmodified 936.51814 0.51813647 4586 Q9NRN7;Q9NRN7-2 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes no 0 0 0 5 0 1 57.002 57.064 2 0.0024813 16687 20230619_1885_Aki_TMTPro18x_K_F5 146.87 110.68 224220 209960 205680 197740 180800 211240 212100 218050 261510 157170 147560 104600 140640 111370 188940 168820 156810 121390 207370 192090 210060 201100 190820 212840 213560 220630 258730 160710 156280 109090 146030 117710 189380 166140 150100 115930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 301560000 13000 4586 12295 24939 20030 20030 1 9606 Homo sapiens 0.047338123425674894 IGQGYLIK Unmodified 890.52255 0.52255314 3567;2399 B3KS36;P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;Q49AJ9;B5MCW2 RPL3;rpl3 60S ribosomal protein L3 no no 0 0 0 2.5 0.5 1 1 53.35 53.39 3 0.0055618 15680 20230619_1882_Aki_TMTPro18x_K_F3 89.296 19.912 399840 326970 376040 377260 386880 508350 414850 366080 435350 227960 226260 154320 206070 202210 332800 248030 275310 182780 369540 299790 384250 378550 402420 500640 417130 380260 433360 236160 240950 162130 217250 209280 332510 245170 263330 174640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 335820000 13001 2399;3567 12296 24940;24941 20031;20032 20032 2 9606 Homo sapiens 0.07291276765465682 IGQLFFGVPPK Unmodified 1201.6859 0.68593008 4155 Q7L5D6;A0A024R847;Q7L5D6-2 GET4;C7orf20 Golgi to ER traffic protein 4 homolog yes no 0 0 0 5.5 0.5 1 1 63.459 63.506 3 0.0016862 19742 20230619_1886_Aki_TMTPro18x_K_F6 84.17 58.953 92255 74577 92477 92553 78809 100080 94245 92029 97471 97002 95621 101020 109460 101050 94123 112420 97823 109700 85301 68430 93732 92100 83445 100420 94266 94726 99073 97907 98841 102380 110600 104790 96291 112600 93643 104180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30235000 13002 4155 12297 24942;24943 20033;20034 20033 2 9606 Homo sapiens 0.09315454816510282 IGQPTVSYFLK Unmodified 1251.6863 0.68632401 4721 Q9Y3B7;Q53G19;Q9Y3B7-2;Q9Y3B7-3 MRPL11 39S ribosomal protein L11, mitochondrial yes no 0 0 0 4 0 1 61.398 61.401 3 0.00031477 18889 20230619_1883_Aki_TMTPro18x_K_F4 101.39 71.062 181050 160830 174590 183030 170930 227150 210500 203530 227170 148500 137810 132740 157200 117700 158200 174860 151600 146230 167450 147390 177960 183620 179200 225710 210390 208090 226710 152700 146480 135110 159800 124980 160580 173150 145070 139220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 43564000 13003 4721 12298 24944 20035;20036 20035 2 9606 Homo sapiens 0.07054829745698044 IGQQNEVR Unmodified 942.48829 0.4882929 1348;1872 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A994J4Z2;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;A0A2R8YF80;B4E0F1;B4DSI8;B3KNW7;A0A2R8Y523;A0A2R8Y5K3;B4DSC8;A0A994J4Z7;P51531-2;P51531;B4DK35;A0A994J501;A0A0U1RQZ9;F6VDE0 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 0 3.5 0.5 1 1 32.822 32.886 2 0.005101 6672 20230619_1883_Aki_TMTPro18x_K_F4 114.5 75.535 32357 15523 36759 33990 48650 53067 38300 45732 42161 29566 50177 59227 43548 41129 50494 22808 53440 51789 29876 14390 37132 33026 49301 52001 39373 46773 42988 31655 50892 58107 45007 42054 51227 24934 51091 48888 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53392000 13004 1348;1872 12299 24945;24946 20037 20037 1 9606 Homo sapiens 0.014748286065696448 IGQQPQQPGAPPQQDYTK Unmodified 1979.9701 0.97010344 3197 M0R0C6;Q92945;A0A384P5V3;M0QYG1 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 7 0 1 45.044 45.13 3 0.00029912 11366 20230619_1887_Aki_TMTPro18x_K_F7 82.877 66.384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13005 3197 12300 24947 20038 20038 1 9606 Homo sapiens 0.019317192617563705 IGRIEDVTPIPSDSTR Unmodified 1754.9163 0.91627696 1363 A0A2R8Y811;P62263 RPS14 40S ribosomal protein S14 yes no 0 0 1 5.5 0.5 1 1 49.523 49.6 3 7.3745E-08 13648 20230619_1885_Aki_TMTPro18x_K_F5 121.62 105.05 193050 246790 194700 169210 212220 171360 179300 202310 173390 185650 198400 165910 190940 153770 182920 241520 201960 187390 179150 225100 197630 177740 217620 174330 182710 204010 178100 187810 201860 169220 194690 163630 187530 238080 192950 178610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148300000 13006 1363 12301 24948;24949 20039;20040 20039 2 9606 Homo sapiens 0.06901546830022198 IGRPSETGIIGIIDPECR Unmodified 1982.0255 0.025509829 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;F5GY55;B7Z2A1;F5GWI0;F5H2L3;A0A7P0Z4L2;F5GZY8 DDB1 DNA damage-binding protein 1 yes no 0 0 1 6.5 0.5 1 1 57.589 57.651 3 5.0151E-14 16850 20230619_1887_Aki_TMTPro18x_K_F7 163.53 140.66 263300 227130 251460 281250 237180 279130 263720 268200 285960 333070 327790 322700 371570 296670 305870 393820 364860 386940 243460 208350 256400 279540 248360 282160 265190 276520 292020 332740 336180 327310 374610 312140 315940 393520 348680 367510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1435400000 13007 1710 12302 24950;24951 20041;20042 20042 2 9606 Homo sapiens 0.07377809457852891 IGSCTQQDVELHVQK Unmodified 1740.8465 0.84648283 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53R85;C9J7S3;C9JLC1;C9JQM9 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 46.043 46.124 3 9.580799999999999E-19 12184 20230619_1886_Aki_TMTPro18x_K_F6 199.68 168.29 680970 527690 589820 634280 588260 605320 673390 692440 641970 779630 757910 805080 923310 747820 743900 948630 932710 949050 628770 484120 606930 631620 613090 616510 673360 703690 661280 783600 779700 814340 928430 784110 771140 949440 890690 901350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1349100000 13008 1207 12303 24952;24953 20043;20044 20044 2 9606 Homo sapiens 0.00569344889754575 IGSFGPQEDLLFLR Unmodified 1590.8406 0.84059282 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 7.67 0.471 1 2 64.027 64.051 2;3 7.987299999999999E-22 19536 20230619_1888_Aki_TMTPro18x_K_F8 232.17 205.49 172850 158860 169740 156170 103460 102820 126680 124610 119160 183590 172680 155420 193790 159380 155250 229790 178720 179260 159930 145390 171550 157430 113220 108710 126360 127450 124250 181390 175440 159340 195240 167980 160260 226740 170770 170800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 230210000 13009 3833 12304 24954;24955;24956 20045;20046 20045 2 9606 Homo sapiens 0.06880614440387944 IGSGFDNIDIK Unmodified 1177.5979 0.59790293 3029 X5D7T7;H0Y8U5;X5D8Y5;Q4KMQ8;Q13363-2;Q13363;D6RAX2;E7ESU7;E9PGB1;H0Y8W7 CTBP1 C-terminal-binding protein 1 yes no 0 0 0 6.5 0.5 2 2 58.365 58.426 2;3 0.00015283 17439 20230619_1886_Aki_TMTPro18x_K_F6 115.29 81.42 253630 222730 251880 279080 278430 290110 310490 294820 312150 364170 407660 483890 387540 346540 419570 383480 387970 457070 234610 204330 256580 277350 287750 292690 311300 302830 321880 367740 413530 480750 397690 363870 424170 389030 371990 433090 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 257200000 13010 3029 12305 24957;24958;24959;24960 20047;20048;20049;20050 20048 4 9606 Homo sapiens 0.016207894352191943 IGSGVER Unmodified 716.3817 0.38170256 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 3.5 1.12 1 1 1 1 33.641 33.707 2 0.0068238 6993 20230619_1883_Aki_TMTPro18x_K_F4 130 37.324 302810 133870 385100 396940 632460 603240 462290 578920 449640 285230 521250 590540 382820 411510 490410 145640 576040 525670 279830 124950 388020 381400 631700 593320 475960 584880 460850 313270 526070 578990 400810 416290 499520 173100 549970 495440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 246800000 13011 3194;3631 12306 24961;24962;24963;24964 20051;20052;20053 20053 3 9606 Homo sapiens 0.012166981120458331 IGSGYDNVDIK Unmodified 1179.5772 0.57716749 3668 P56545;P56545-3;P56545-2 CTBP2 C-terminal-binding protein 2 yes no 0 0 0 4.5 0.5 1 1 51.168 51.22 2 1.111E-08 14285 20230619_1885_Aki_TMTPro18x_K_F5 182.28 109.04 181910 148230 166520 170080 164160 194390 186230 168840 199600 238800 271530 259960 251890 221590 230400 293710 278170 274460 168080 135900 170440 170320 171430 194160 186960 176180 205550 238190 274240 261760 256740 233570 237660 292720 265660 260900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158830000 13012 3668 12307 24965;24966 20054 20054 1 9606 Homo sapiens -0.005438009444560521 IGSLDNITHVPGGGNK Unmodified 1577.8162 0.81616898 597 P10636-3;A0A024RA19;A0A0G2JMX7;A0A0G2JS76;A0A024R9Y1;A0A0G2JPD5;A0A0G2JQJ7;A0A7I2PLE3;A0A024RA17;A0A7P0T936;A0A024R9Y0;I3L170;B3KTM0;A0A7I2PJZ2;P10636-5;P10636-7;P10636-6;P10636-8;P10636-4;P10636-2;P10636;P10636-9;B4DSB3;B4DSE3 MAPT Microtubule-associated protein tau;Microtubule-associated protein yes no 0 0 0 4.5 3.5 1 1 50.543 50.619 3 2.4374E-08 13754 20230619_1888_Aki_TMTPro18x_K_F8 134.9 103.91 161590 155860 175410 225040 123240 130270 172050 188370 205960 239720 245180 248050 224770 199900 193220 270330 231940 255480 149690 143160 176540 220280 133400 140250 171850 189900 209550 239610 248780 249820 228620 211450 199620 269460 221710 242730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 752640000 13013 597 12308 24967;24968 20055;20056 20056 2 9606 Homo sapiens 0.05037354286878326 IGSLIDVNQSK Unmodified 1172.6401 0.6401021 3696;5 P61326;F5H6P7;P61326-2;A0A023T6R1;Q96A72 MAGOH;MAGOHB;FLJ10292 Protein mago nashi homolog;Protein mago nashi homolog 2 no no 0 0 0 4.5 3.5 1 1 56.677 56.705 2;3 6.2727E-08 16445 20230619_1888_Aki_TMTPro18x_K_F8 195.27 134.75 149730 99036 93777 132870 98919 154290 127770 124980 209700 175740 167440 223420 232980 199640 129490 295580 293370 304280 137860 91024 100290 131580 103790 153580 129590 131100 207280 176490 176860 223860 231040 211770 143460 295410 279190 288870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 449050000 13014 3696;5 12309 24969;24970 20057;20058 20058 2 9606 Homo sapiens 0.060687648435987285 IGSLIDVNQSKDPEGLR Unmodified 1839.969 0.96904081 3696;5 P61326;F5H6P7;P61326-2;A0A023T6R1;Q96A72 MAGOH;MAGOHB;FLJ10292 Protein mago nashi homolog;Protein mago nashi homolog 2 no no 0 0 1 7 0 1 55.389 55.45 3 5.9067E-09 15918 20230619_1887_Aki_TMTPro18x_K_F7 122.68 103.24 200780 213280 222660 205930 290450 187510 265210 253810 147240 222240 220070 111190 123770 75500 249290 83344 70290 43008 186160 195080 225130 208630 294190 193040 265350 253820 159910 222550 217720 116870 134850 79655 240500 81951 68794 41377 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 574590000 13015 3696;5 12310 24971 20059 20059 1 9606 Homo sapiens 0.08265504892824538 IGSTIDDTISK Unmodified 1148.5925 0.5924832 1109 A0A0S2Z4Y4;A0A0S2Z5H3;Q14677;Q14677-3;Q14677-2 CLINT1 Clathrin interactor 1 yes no 0 0 0 5 0.816 1 1 1 52.471 52.529 3 0.00010564 14831 20230619_1885_Aki_TMTPro18x_K_F5 119.34 99.032 121390 102250 116630 117560 117600 112410 132090 111590 146460 151810 145650 146820 162690 120980 139470 176030 158040 157360 112230 93736 118870 117440 122340 114140 132760 115210 148440 151110 150220 148420 164300 128620 143460 174850 151020 149660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121320000 13016 1109 12311 24972;24973;24974 20060 20060 1 9606 Homo sapiens 0.02413065852761065 IGSVAPDTINNHVK Unmodified 1463.7732 0.77324153 2608 B4DW31;Q9UHY1 NRBP1 Nuclear receptor-binding protein yes no 0 0 0 8 0 1 45.112 45.14 3 6.086300000000001E-20 11536 20230619_1888_Aki_TMTPro18x_K_F8 201.48 174.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13017 2608 12312 24975 20061 20061 1 9606 Homo sapiens 0.05990584229448359 IGTAEPDYGALYEGR Unmodified 1610.7577 0.75765105 3477 P19174;P19174-2;Q4LE43;B4DMA3;Q9UFY1 PLCG1;PLCG1 variant protein;DKFZp434N101 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1;Phosphoinositide phospholipase C yes no 0 0 0 3.5 0.5 1 1 53.787 53.822 2 3.8793E-18 15861 20230619_1882_Aki_TMTPro18x_K_F3 234.92 208.41 27152 22904 23398 24571 21045 25162 23275 23480 25625 35120 38843 34673 36500 33095 27069 38096 37315 40893 25082 20984 24052 24695 22132 25369 23432 24415 26529 34843 39084 35180 36893 34453 28321 38326 35629 38797 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89005000 13018 3477 12313 24976;24977 20062 20062 1 9606 Homo sapiens -0.023297470782381424 IGTDIQDNK Unmodified 1002.4982 0.49818889 3449 P14324-2;P14324;A0A087X090 FDPS Farnesyl pyrophosphate synthase yes no 0 0 0 4 0 1 44.83 44.875 2 4.8411E-06 11657 20230619_1883_Aki_TMTPro18x_K_F4 184.36 137.36 158630 84280 187760 201490 234080 254300 176130 230430 200980 178000 247090 259920 246830 220500 209890 126960 279170 258800 146580 78209 189040 194290 237850 252340 181980 235530 205110 185190 251380 258610 250250 223920 217400 136780 266300 244490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92370000 13019 3449 12314 24978 20063 20063 1 9606 Homo sapiens -0.0029602817870681974 IGTFDLK Unmodified 792.43815 0.43815481 260 A0A024R3R5;Q14739;A0A494C1L1 LBR Lamin-B receptor yes no 0 0 0 7.5 0.5 1 1 56.216 56.274 2 0.007829 16269 20230619_1888_Aki_TMTPro18x_K_F8 128.57 51.72 1138100 910540 1139700 1034600 872980 933040 946490 846040 897030 1320200 1259500 1208900 1563200 1215600 929750 1595900 1579300 1491600 1052300 834800 1152700 1033900 929340 949840 949550 883580 933360 1304900 1287400 1233000 1555400 1274400 996040 1589700 1504200 1418100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 350700000 13020 260 12315 24979;24980 20064 20064 1 9606 Homo sapiens 0.033633259487032774 IGTVMTFL Oxidation (M) 896.46774 0.46774038 3128 Q53Y51;J3KQ18;P30046;H7C342 DDT D-dopachrome decarboxylase yes no 0 1 0 1 0 1 63.937 63.937 2 0.0226 20101 20230619_1880_Aki_TMTPro18x_K_F1 80.377 77.25 7996.5 5824.8 8425 10118 10507 10835 10056 9840.5 10310 10218 9014.6 10177 10878 11758 11120 11968 10763 11103 7392.3 5368.5 8563.7 9864.4 10728 10875 10173 10134 10447 10310 9404.3 10385 11072 12075 11289 11975 10304 10553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6883600 13021 3128 12316 24981 20065 20065 1817 1 9606 Homo sapiens 0.015365219025511578 IGTVMTFL Unmodified 880.47283 0.47282576 3128 Q53Y51;J3KQ18;P30046;H7C342 DDT D-dopachrome decarboxylase yes no 0 0 0 2.5 0.5 1 1 66.869 66.892 2 0.002743 21563 20230619_1881_Aki_TMTPro18x_K_F2 121.87 100.72 25024 21822 24807 26748 20494 34387 24888 26016 36706 27608 23110 27602 24102 24383 25662 26157 28344 27124 23147 20015 25178 26699 21863 33969 25203 27195 36164 27846 24428 27886 24679 25336 26217 26313 27085 25756 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36976000 13022 3128 12316 24982;24983 20066;20067 20066 2 9606 Homo sapiens 0.027808257651599888 IGVITNR Unmodified 771.46029 0.46028724 2202 Q96IR1;B2R491;P62701;Q53HV1 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform yes no 0 0 0 2 0.816 1 1 1 42.369 42.418 2 0.0074767 10894 20230619_1881_Aki_TMTPro18x_K_F2 124.89 95.549 1181200 931420 1015200 1081200 1215100 1343300 1236100 1225000 1595700 1268600 1274400 1235300 1371700 1110400 1098400 1446200 1458200 1207500 1090700 854170 1048500 1083200 1247900 1335900 1255800 1260600 1591700 1279600 1326300 1252000 1384000 1167200 1143500 1433600 1390000 1150400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2200800000 13023 2202 12317 24984;24985;24986 20068;20069;20070 20069 3 9606 Homo sapiens 0.06541550417136932 IGVLDEGK Unmodified 829.45453 0.45453316 299 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 RPS9 40S ribosomal protein S9 yes no 0 0 0 4.12 1.05 3 2 2 1 50.547 50.61 2;3 0.0056633 14234 20230619_1883_Aki_TMTPro18x_K_F4 121.62 45.484 1689400 1171800 1418900 1456900 1616300 1743800 1622900 1791300 1932200 1863600 1890300 1677300 2106600 1557800 1669800 2278000 2058300 1696500 1558600 1075900 1466900 1452000 1664200 1742600 1646000 1827500 1949800 1873900 1949000 1709200 2121200 1649300 1730300 2243300 1963100 1618800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3257699999.9999995 13024 299 12318 24987;24988;24989;24990;24991;24992;24993;24994 20071;20072;20073 20072 3 9606 Homo sapiens 0.032984071148121075 IGVNQPK Unmodified 754.43374 0.43373813 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 1 0 1 40.399 40.399 2 0.013007 10269 20230619_1880_Aki_TMTPro18x_K_F1 114.54 24.637 70665 38642 88140 99623 110970 129330 91380 108200 109780 73470 118680 150270 110220 114470 103280 65991 170760 175990 65340 35907 88495 95828 112970 127890 93914 111070 110990 78499 121180 147680 112640 116720 108640 73366 162760 165970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68189000 13025 3756 12319 24995 20074 20074 1 9606 Homo sapiens 0.046698615258037535 IGVPSATEIIK Unmodified 1126.6598 0.6597749 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 8 0 1 57.017 57.068 3 0.00025642 16596 20230619_1888_Aki_TMTPro18x_K_F8 106.4 53.61 117430 115770 126100 139050 121830 141600 161920 137820 147320 164180 142840 123450 159780 131550 169100 141810 130920 140490 108790 106120 127440 138560 127900 142920 160430 141820 150870 163270 147460 127460 162890 136050 169530 142380 125700 133420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 385180000 13026 1748 12320 24996 20075 20075 1 9606 Homo sapiens 0.10151140854372898 IGVSSDSGSINPMSEGFK Unmodified 1810.8407 0.84072875 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 6 0 1 58.283 58.352 3 1.6467E-09 17425 20230619_1886_Aki_TMTPro18x_K_F6 129.29 110.7 28400 21745 27410 30285 23830 29652 24389 27400 29333 31397 29055 28318 34571 25430 26700 31694 30946 34132 26243 19981 27888 29864 25088 29967 24735 28252 29619 31420 30052 28790 34709 26687 27551 31869 29590 32381 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33208000 13027 68 12321 24997 20076 20076 1 9606 Homo sapiens -0.032257984125863004 IGYNPDTVAFVPISGWNGDNMLEPSANMPWFK 2 Oxidation (M) 3598.6537 0.65372661 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A087WVQ9;Q53HR5;Q53GA1;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;A0A4D5RA98;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;Q9H2I7;A0A4D5RA52;A0A087WV01;Q504Z0;Q53HR1;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;B4E2C5;Q16577;A0A4D5RA61;A0A4D5RBI9;A9X7H1;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 2 0 1.5 0.5 1 1 65.395 65.398 4 0.00049013 20986 20230619_1881_Aki_TMTPro18x_K_F2 69.356 63.061 6100.4 3948.6 5069.5 5423.6 6070.9 5185.8 4410.2 5179.6 3991.8 7509.2 4980.5 5397.5 6859.2 6058 5679.3 6909.7 7061.5 7442.3 5625.6 3630.4 5248.8 5352.2 6171.8 5266 4536.6 5351.2 4154.5 7393.7 4973.9 5592.9 6887.4 6275.1 5878.7 6955.9 6745.7 7061.7 2 2 2 2 2 2 2 2 2 2 1 2 2 2 2 2 2 2 29236000 13028 1560;3997 12322 24998;24999 20077;20078 20077 1020;1021 2 9606 Homo sapiens -0.04165410504083411 IGYSHENVSVIPNCQFR Unmodified 2018.9632 0.96324392 2979 F8VP72;F8W043;F8W0Q1;Q9P0A0;F8W057;Q9GZN1-2;Q9GZN1 ACTR6 Actin-related protein 6 yes no 0 0 0 1 0 1 49.129 49.129 3 8.726E-10 14012 20230619_1880_Aki_TMTPro18x_K_F1 141.06 117.96 11756 9453.2 11719 9378.5 9766 10196 12959 11299 12241 12298 12321 13294 14902 12659 11666 15096 16108 15477 10869 8656.6 11864 9502.4 10374 10281 12859 11497 12518 12405 12757 13430 14978 13208 12183 15142 15364 14698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36431000 13029 2979 12323 25000 20079 20079 1 9606 Homo sapiens -0.005479168904685139 IGYSSPLTLSDQSSK Unmodified 1581.7886 0.78861683 2485 B4DH39;Q8TAF6;O60488-2;O60488;A0A804HI36 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes no 0 0 0 8 0 1 55.318 55.38 3 6.1781E-08 15885 20230619_1888_Aki_TMTPro18x_K_F8 136.21 123.08 57028 46586 51202 54163 36649 39907 40577 44821 51240 63961 58175 52328 60590 47835 51259 72491 69956 59847 52687 42717 52280 53912 39356 41574 41072 45968 51944 63234 59415 53532 61313 50806 53434 71675 66683 57014 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153290000 13030 2485 12324 25001 20080 20080 1 9606 Homo sapiens 0.020994062359932286 IGYSSPQTLADQSSK Unmodified 1580.7682 0.76821574 284 B3KN05;A0A7P0TA76;B2RBE0;A0A024R487;O95573;A0A7P0TBB1;B3KMA6;A0A7P0T8L6;A0A7P0TB52;A0A7P0T905;H7BYZ7 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes no 0 0 0 7 0 1 49.056 49.14 3 2.8244E-05 13205 20230619_1887_Aki_TMTPro18x_K_F7 98.421 78.412 170120 136350 173310 162220 177550 177520 181150 175760 207320 207290 211710 205510 235000 187070 196480 258550 214900 198230 157310 125060 175760 161970 184050 178390 183300 180530 209980 207770 217950 208210 237190 197310 201830 255130 205320 188980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183460000 13031 284 12325 25002 20081 20081 1 9606 Homo sapiens 0.0010623557618600898 IHACLYFIAPTGHSLK Unmodified 1826.9502 0.95016004 1492 D6RGI3;A0A384P5S0;D6RER5;Q9NVA2;Q9NVA2-2;D6RDU5 SEPT11 Septin-11 yes no 0 0 0 5 0 1 52.715 52.787 4 1.5787E-08 14940 20230619_1885_Aki_TMTPro18x_K_F5 141 103.05 44717 27797 36003 40208 34779 39136 42449 38942 39923 36278 40606 39078 45993 35558 40899 40613 43544 46017 41220 25578 37307 39559 36441 39637 42277 39748 40831 36895 41861 39443 46502 37089 41822 41035 41654 43641 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239430000 13032 1492 12326 25003 20082 20082 1 9606 Homo sapiens 0.06976296788070613 IHAETLK Unmodified 810.45995 0.45995289 2757 D6RCT7;C9JKA9;Q9NS87-4;Q9NS87-2;Q9NS87 KIF15 Kinesin-like protein;Kinesin-like protein KIF15 yes no 0 0 0 6 0 1 38.313 38.395 3 0.0053143 8869 20230619_1886_Aki_TMTPro18x_K_F6 104.37 5.9477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13033 2757 12327 25004 20083 20083 1 9606 Homo sapiens 0.04714130697288965 IHAGPITK Unmodified 835.49159 0.49158736 896 V9HW24;A0A087X2I1;P62333 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 2 0 1 39.154 39.221 3 0.00011719 9447 20230619_1881_Aki_TMTPro18x_K_F2 164.53 85.065 635680 298140 536190 622400 846600 644770 668030 704250 1016300 781220 866490 815490 882860 616920 741500 854720 909720 757070 585470 276200 557730 601630 848650 651890 694440 717280 1009100 786800 896120 819890 893110 655910 766330 849330 867730 720660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 602280000 13034 896 12328 25005 20084 20084 1 9606 Homo sapiens 0.0672612345122161 IHAYSQLLESYR Unmodified 1478.7518 0.75177781 3908 Q15008;Q15008-4;B3KT66;Q15008-3;Q15008-2 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 2.5 0.5 1 1 51.981 52.033 3 1.1465E-40 15318 20230619_1881_Aki_TMTPro18x_K_F2 256.63 231.86 37567 24644 33105 36237 35702 37504 38223 37402 39971 34050 35090 30833 35657 29331 35398 34383 37016 36062 34660 22675 34055 35648 36938 37818 38448 38133 40415 34504 36237 31418 36357 30586 36082 34570 35395 34238 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217570000 13035 3908 12329 25006;25007 20085 20085 1 9606 Homo sapiens 0.03155199200750758 IHCACWTQDGLR Unmodified 1515.6711 0.67110142 2763 C9JYC1;Q9H6R7-2;Q9H6R7 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 yes no 0 0 0 8 0 1 42.927 42.93 3 6.5841E-08 10663 20230619_1888_Aki_TMTPro18x_K_F8 130.1 122.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13036 2763 12330 25008 20086 20086 1 9606 Homo sapiens -0.06610728385453513 IHCTQTLLEGDGPK Unmodified 1567.7664 0.7664416 2949 P29762;F1T0F7 CRABP1 Cellular retinoic acid-binding protein 1 yes no 0 0 0 6 1.1 2 2 1 42.646 42.719 3;4 2.9523E-07 11914 20230619_1886_Aki_TMTPro18x_K_F6 139.86 138.8 150210 149740 177090 181760 282530 300660 222660 217900 186070 187560 200550 223760 217370 174540 221210 204820 228520 239270 139290 137270 179270 182410 283220 293110 226850 227460 192400 192280 206080 223800 221420 183340 225180 207320 218650 226860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 323930000 13037 2949 12331 25009;25010;25011;25012;25013 20087;20088;20089 20088 3 9606 Homo sapiens 0.005269032865726331 IHDENLR Unmodified 895.45118 0.45117911 3127 Q86Y74;J3KPP4;O95232;Q6PKC2;D6RDI2 CROP;LUC7L3 Luc7-like protein 3 yes no 0 0 0 2 0 1 30.538 30.604 2 0.029363 5945 20230619_1881_Aki_TMTPro18x_K_F2 95.541 72.65 15024 3965.9 15171 16399 24068 18419 19271 20057 27569 17759 22897 23459 23713 24381 18626 13576 26069 27392 13835 3753.3 15530 15541 24116 18503 19958 20314 27398 18269 23742 23571 23969 24550 19410 14611 24880 25865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15100000 13038 3127 12332 25014 20090 20090 1 9606 Homo sapiens -0.0007284293919838092 IHDENLRK Unmodified 1023.5461 0.54614213 3127 Q86Y74;J3KPP4;O95232;Q6PKC2;D6RDI2 CROP;LUC7L3 Luc7-like protein 3 yes no 0 0 1 5.5 0.5 1 1 33.409 33.472 4 0.035212 7032 20230619_1886_Aki_TMTPro18x_K_F6 65.305 26.287 246180 64518 232750 234520 337280 224380 262420 277730 291590 259170 337880 267920 284570 225900 227510 169990 321940 250340 226560 60823 238920 222490 338930 228930 269940 279510 297120 263140 341560 270210 289330 231670 237190 176460 306620 237180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 153800000 13039 3127 12333 25015;25016 20091;20092 20092 2 9606 Homo sapiens 0.03531090531987502 IHDLALR Unmodified 836.48684 0.48683634 4568 Q9NQ29-3;Q9NQ29;A8MYV2;Q1W6G4;Q53G47;Q9NQ29-2;B8ZZ12 LUC7L Putative RNA-binding protein Luc7-like 1 yes no 0 0 0 7.5 0.5 1 1 40.151 40.178 2 0.051913 9307 20230619_1887_Aki_TMTPro18x_K_F7 85.359 28.257 180600 97812 169530 185860 201740 180560 198700 201680 227230 210320 232100 222250 224390 185670 200470 227170 237000 219280 166560 90399 173670 180270 206630 183440 201430 204820 230030 212440 237480 223910 228110 194930 206430 227120 226280 208420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109590000 13040 4568 12334 25017;25018 20093 20093 1 9606 Homo sapiens 0.0620523930847412 IHDPQLLTER Unmodified 1220.6513 0.65133548 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 4 0.816 1 1 1 41.291 41.354 3 4.9997E-06 10112 20230619_1883_Aki_TMTPro18x_K_F4 161.67 115.54 228360 139180 232320 237710 268830 239240 273300 281490 341180 262250 274920 268670 296980 238310 277100 337520 305790 309790 210850 128350 236190 231920 276080 242770 277370 284100 340900 266360 286120 271660 301430 252100 284040 335840 292330 294510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1761399999.9999998 13041 1207 12335 25019;25020;25021 20094;20095 20094 2 9606 Homo sapiens 0.04983586937760265 IHDVLCK Unmodified 883.45857 0.45857268 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJH8;A0A804HLK8 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 7.5 0.5 1 1 43.665 43.71 3 0.0044989 10952 20230619_1888_Aki_TMTPro18x_K_F8 104.21 61.182 362110 155480 283470 320920 342880 292270 338580 351090 443930 369270 400940 415860 430700 329380 333280 479480 441920 424600 333240 144100 295500 309900 351030 299010 344860 355120 444400 373680 414640 417310 433880 350590 347420 475900 421660 403940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 889200000 13042 1723 12336 25022;25023 20096;20097 20097 2 9606 Homo sapiens 0.012181733368834102 IHEACMLALGSVK Oxidation (M) 1443.7214 0.72140566 4386 Q96P70 IPO9 Importin-9 yes yes 0 1 0 1 0 1 49.302 49.302 3 0.0011536 14092 20230619_1880_Aki_TMTPro18x_K_F1 78.763 50.901 38725 19614 30708 37483 41433 34670 36485 40933 37153 32112 38021 36050 33366 30765 37772 34564 36050 34029 35662 18137 32046 36319 41983 35413 37109 41146 37833 33038 38765 36259 34423 32095 38218 34659 34495 32334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28198000 13043 4386 12337 25024 20098 20098 2757 1 9606 Homo sapiens 0.017293812196612635 IHEACMLALGSVK Unmodified 1427.7265 0.72649104 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 2 0 1 53.449 53.477 3 0.0013719 15953 20230619_1881_Aki_TMTPro18x_K_F2 80.469 59.168 70735 42132 63549 65364 64663 68897 68906 74327 79304 63670 73564 65196 70482 49813 66537 84588 69917 69893 65241 38810 65174 64134 67201 69497 69577 75258 79912 64968 75555 65696 71781 53751 68019 83560 66864 66541 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163080000 13044 4386 12337 25025 20099 20099 1 9606 Homo sapiens 0.029736850822700944 IHEATGMPAGK Oxidation (M) 1126.5441 0.54409322 146 A0A024R1K8;Q15459;Q15459-2;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 1 0 6 0.816 1 1 1 33.734 33.797 3 0.00022449 7171 20230619_1886_Aki_TMTPro18x_K_F6 103.34 82.471 68396 23547 58356 63435 90650 69931 81388 79765 104200 72744 96831 88919 86109 79388 77372 81994 84190 88578 62938 21972 60600 60803 91173 70443 83265 80622 104440 74441 99153 89263 87851 82312 79236 82723 80517 84046 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152170000 13045 146 12338 25026;25027;25028 20100;20101;20102 20101 64 3 9606 Homo sapiens -0.01411706268117996 IHEATGMPAGK Unmodified 1110.5492 0.5491786 146 A0A024R1K8;Q15459;Q15459-2;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 6.5 0.5 1 1 38.441 38.514 3 6.1608E-05 8640 20230619_1887_Aki_TMTPro18x_K_F7 104.43 87.408 52631 18183 41000 46232 63104 48081 55090 53444 77307 60123 63249 61439 70881 59951 53519 63409 62020 63144 48402 16946 42954 44359 63481 48607 56662 54406 76910 60489 65850 62267 71280 62076 55250 63630 59265 59974 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292570000 13046 146 12338 25029;25030 20103 20103 1 9606 Homo sapiens -0.0016740240550916496 IHEDIFDIIDR Unmodified 1384.6987 0.69867961 3493 P23258;A0A1B4Z394;A0A7P0T9G6;Q9NRH3;K7EIS0;K7EKE5 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain;Tubulin gamma chain yes no 0 0 0 3 0 1 60.329 60.358 3 6.4766E-05 18580 20230619_1882_Aki_TMTPro18x_K_F3 126.71 90.999 11573 7150.2 6888.9 10652 8549.2 9193.8 12950 10432 12573 10058 13142 11118 14255 12396 12090 14388 10772 17278 10649 6581.8 7438.9 10442 8871.9 9432.6 12777 10573 12837 10224 13492 11301 14408 12855 12275 14579 10364 16357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180290000 13047 3493 12339 25031 20104 20104 1 9606 Homo sapiens 0.02171821418073705 IHEDSTGGIYTVGVTTR Unmodified 1804.8955 0.89554151 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 0 0 5.5 0.5 1 1 44.858 44.941 3 2.0999E-38 11615 20230619_1885_Aki_TMTPro18x_K_F5 255.21 230.65 58238 35784 48393 55884 62697 67532 57817 52723 65602 51954 56607 53238 56704 38861 49463 51103 53880 60812 53692 32959 50233 54888 63882 67044 58801 54887 66004 52619 58479 53512 57465 41271 50679 51690 51557 57631 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177520000 13048 4170 12340 25032;25033 20105 20105 1 9606 Homo sapiens 0.02528956450350961 IHEGCEEPATHNALAK Unmodified 1775.8261 0.82608174 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 4 0.816 1 1 1 36.35 36.414 4 3.1145E-12 8077 20230619_1883_Aki_TMTPro18x_K_F4 169.19 156.7 351950 113230 231390 305820 344560 226220 333700 338540 401860 376760 422850 379810 502120 346800 266140 520730 374210 392290 323280 105730 247050 291640 347820 237430 339100 339160 406410 378750 435660 384840 498220 368170 282180 512530 357120 373900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2551800000 13049 826 12341 25034;25035;25036 20106;20107 20106 2 9606 Homo sapiens -0.030798257700098475 IHEPIMLK Oxidation (M) 995.54739 0.54738768 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 1 0 7.5 0.5 1 1 45.077 45.134 3 0.015668 11551 20230619_1888_Aki_TMTPro18x_K_F8 67.897 38.81 185190 68451 148600 181340 180350 162840 166460 174230 211280 236640 216550 182550 240540 194510 168350 263260 207830 228200 170370 63812 154600 173370 184330 166230 170060 178850 213160 234160 222640 188360 241250 203940 175180 261190 198610 217040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 540320000 13050 3152 12342 25037;25038 20108 20108 1831 1 9606 Homo sapiens 0.04943588576554703 IHEPIMLK Unmodified 979.55247 0.55247306 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 7.5 0.5 1 1 47.325 47.398 3 0.00098289 12492 20230619_1888_Aki_TMTPro18x_K_F8 119.27 86.434 78825 42721 71726 70992 57481 75271 77641 69397 91254 90353 83735 81880 91103 79759 73560 103450 82677 89935 72679 39407 73250 69396 61499 75588 77529 71885 91912 89960 86559 83460 91937 83575 75784 102730 79067 85537 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284350000 13051 3152 12342 25039;25040 20109 20109 1 9606 Homo sapiens 0.06187892439163534 IHFHNLQGEK Unmodified 1221.6255 0.62545508 1120 A0A0S2Z583;Q8TC12;A0A0S2Z575;Q8TC12-2;H0YJ46;G3V2G6;G3V234;B3KQ19;H0YIZ8 RDH11 Retinol dehydrogenase 11 yes no 0 0 0 7.5 0.5 1 1 38.921 38.946 4 5.5477E-05 9049 20230619_1888_Aki_TMTPro18x_K_F8 121.73 90.843 117720 55497 100180 115870 115410 118710 127430 131590 153020 113200 133300 127990 121930 110530 114650 128760 135180 123080 108430 51412 103540 111990 119000 120020 128560 133060 153490 115890 137150 128740 124530 115500 117920 128760 129060 117000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168630000 13052 1120 12343 25041;25042 20110 20110 1 9606 Homo sapiens 0.02350737486131038 IHFIEAQDLQGK Unmodified 1397.7303 0.73031409 1556 A0A499FIX8;H7BXI1;A0FGR8-2;A0FGR8;A0FGR8-6;A0FGR8-4 ESYT2 Extended synaptotagmin-2 yes no 0 0 0 7 0 1 51.659 51.733 3 2.4002E-05 14355 20230619_1887_Aki_TMTPro18x_K_F7 107.09 89.652 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13053 1556 12344 25043 20111 20111 1 9606 Homo sapiens 0.047358141720451385 IHFKPPK Unmodified 865.51741 0.51740818 3980 Q4VC31;C9JQ41;H7C525;C9JBU9 CCDC58 Coiled-coil domain-containing protein 58 yes no 0 0 1 5 0 1 41.236 41.322 3 0.057285 10084 20230619_1885_Aki_TMTPro18x_K_F5 62.715 37.543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13054 3980 12345 25044 20112 20112 1 9606 Homo sapiens 0.07927017693521066 IHFPDFSTR Unmodified 1118.5509 0.55089316 1586 B4DVW7;A0A5F9ZI63;O75530-3;O75530;O75530-2 EED Polycomb protein EED yes no 0 0 0 1.5 0.5 1 1 51.344 51.367 3 0.00094815 14936 20230619_1880_Aki_TMTPro18x_K_F1 97.857 82.706 15134 11690 13740 14175 14576 14621 18236 14201 16689 16616 19015 16976 20572 13179 16792 20530 18661 21746 13978 10726 14090 14120 15155 14748 18118 14614 17180 16672 19453 17106 20736 14132 17267 20565 17858 20630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41675000 13055 1586 12346 25045;25046 20113 20113 1 9606 Homo sapiens -0.003640253252342518 IHFPLATYAPVISAEK Unmodified 1755.956 0.95595693 2408;4144;3747 P68363;B3KT06;B3KPS3;P68363-2;B4DDU2;F8VVB9;C9JDS9;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;P0DPH7-2;Q6PEY2 TUBA1B;TUBA4A;TUBA1A;TUBA1C;TUBA2;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-3E chain no no 0 0 0 3.07 0.442 1 12 2 70.24 70.306 3 1.2509E-14 18846 20230619_1882_Aki_TMTPro18x_K_F3 181.26 160.82 988310 576330 869470 891810 693700 868400 817640 817070 822240 954160 1085700 1123000 1111800 861200 946460 1115600 1000800 1171000 911310 530920 890610 874090 738800 878140 818010 842140 848260 961640 1102800 1123600 1125200 910790 969350 1119600 958200 1111000 15 15 15 15 15 15 14 14 15 15 15 15 15 15 15 15 15 15 26740000000 13056 2408;3747;4144 12347 25047;25048;25049;25050;25051;25052;25053;25054;25055;25056;25057;25058;25059;25060;25061 20114;20115;20116;20117;20118;20119;20120;20121;20122;20123;20124;20125;20126;20127;20128;20129;20130 20115 17 9606 Homo sapiens 0.10821718571423844 IHGLILLGR Unmodified 990.63383 0.63383493 1043 A0A0J9YVP0;O95714;A8KAQ8;A0A3B3IRP6 HERC2 E3 ubiquitin-protein ligase HERC2 yes no 0 0 0 6 0 1 51.53 51.606 3 0.00012196 14595 20230619_1886_Aki_TMTPro18x_K_F6 116.73 72.376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13057 1043 12348 25062 20131 20131 1 9606 Homo sapiens 0.13814336193422605 IHGLLEAGR Unmodified 964.54541 0.54541385 859 A0A087WYQ1;O15020-2;O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes no 0 0 0 8 0 1 41.677 41.674 3 8.1013E-06 10162 20230619_1888_Aki_TMTPro18x_K_F8 167.23 120.8 26240 15481 27929 34744 19904 21040 19516 14432 19481 20849 24399 26812 22912 20658 23652 23657 26749 23140 24234 14341 28140 33273 21285 22143 19721 15434 20048 20912 24758 26728 23475 21658 24207 23700 25538 21997 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22185000 13058 859 12349 25063 20132 20132 1 9606 Homo sapiens 0.06172295882936396 IHGTEEGQQILK Unmodified 1351.7096 0.70957864 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;Q14980-5;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q86XH4;F5H0Z7;F5H763;F5H3L6;F5H2F3;G1UI36;F5GZW1;F5H1L0;F8W6T3;F5H068;F5H073;F5GWK2;F5H4Y4;F5GWA2;F5H7R5;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 3.67 1.25 1 1 1 46.826 46.874 3 0.00011492 10319 20230619_1885_Aki_TMTPro18x_K_F5 109.16 87.856 171830 138320 182190 191260 165070 159380 194990 185770 172280 213990 226810 225490 241600 196900 206830 245970 224910 220870 158950 127070 183980 188390 173300 164240 194270 188800 179140 214960 230780 227470 244370 206640 212140 244890 214990 210060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 593900000 13059 349;3906 12350 25064;25065;25066 20133;20134 20134 2 9606 Homo sapiens 0.04779223792365883 IHGVGFK Unmodified 756.42826 0.42825883 2204 B2R4C1;P62899;H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899-2;B8ZZK4 RPL31 60S ribosomal protein L31 yes no 0 0 0 2.5 0.5 1 1 41.998 42.069 3 0.0032925 10528 20230619_1882_Aki_TMTPro18x_K_F3 116.35 58.394 308080 223150 305510 361690 412150 383230 380700 307890 471000 319680 370800 330780 391090 285150 394100 402170 293270 320900 284650 205480 312430 353830 418370 384200 388160 320410 470280 323220 385840 334120 398210 301910 395200 397730 281760 305550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 820420000 13060 2204 12351 25067;25068 20135 20135 1 9606 Homo sapiens 0.04030182733993115 IHIDLPNEQAR Unmodified 1304.6837 0.68369824 896 V9HW24;A0A087X2I1;P62333 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 4.5 0.5 1 1 45.9 45.96 3 2.3019E-12 12016 20230619_1885_Aki_TMTPro18x_K_F5 198.62 186.01 166600 128710 156900 161170 262870 197060 208900 189200 236850 144750 150730 122710 146770 134570 146750 150520 133790 132890 153930 118140 161700 160580 262510 196610 214460 192660 236090 148220 158370 126150 150000 139220 148530 150030 128130 126410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1176600000 13061 896 12352 25069;25070 20136;20137 20137 2 9606 Homo sapiens 0.04354374340755385 IHIPEPDLR Unmodified 1088.5978 0.59784335 1942 P85037;P85037-2;B4DY33;A4D1Z4;U3KQ26 FOXK1;KIAA0415 Forkhead box protein K1 yes no 0 0 0 5 0 1 47.256 47.332 3 0.00071525 12591 20230619_1885_Aki_TMTPro18x_K_F5 94.692 61.571 21167 16032 20315 23166 19983 19584 21862 21269 25771 18637 19628 17714 21357 21420 22212 24087 24828 23746 19557 14738 20716 22755 20820 20114 22054 21553 25767 18968 20497 18174 21813 22101 22726 24139 23723 22562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35437000 13062 1942 12353 25071 20138 20138 1 9606 Homo sapiens 0.057088342259021374 IHIPFISK Unmodified 953.56984 0.56983769 3691 Q53HJ0;Q59EL2;P61201;P61201-2;B2R6N0;B4DIH5;H0YMC2 COPS2 COP9 signalosome complex subunit 2 yes no 0 0 0 5 0 1 57.036 57.096 3 0.00077951 16718 20230619_1885_Aki_TMTPro18x_K_F5 121.62 100.11 49117 23675 41767 50633 40277 49389 51196 49650 54316 57789 48303 45440 58923 47859 45008 57686 49894 49646 45244 21938 43080 48844 42299 49982 51077 50927 54966 57592 50279 46780 59126 49821 46352 57329 47689 47240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95291000 13063 3691 12354 25072 20139 20139 1 9606 Homo sapiens 0.09119556036455378 IHLDNLDKR Unmodified 1122.6146 0.61455605 4594 Q9NU22;Q6ZVV6 MDN1 Midasin yes no 0 0 1 7.5 0.5 1 1 41.181 41.213 4 0.015951 9800 20230619_1887_Aki_TMTPro18x_K_F7 62.303 25.969 21595 10008 21494 22343 21601 20049 21124 19812 26783 22074 25962 26377 30065 17251 20248 30651 23428 27961 19914 9283 21842 21499 22395 20432 21506 20332 26920 22322 26843 26291 30031 18834 20998 30399 22417 26569 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123390000 13064 4594 12355 25073;25074 20140 20140 1 9606 Homo sapiens 0.05815335111856257 IHLDVCQLR Unmodified 1152.6074 0.60736218 1547 A0A494C097;Q8TDY1;Q6RBZ9;R4X5Z4;Q7L9G8;Q6RC00;Q53F50;Q49AT3;B3KTQ4;O75752 OK/KNS-cl.1;B3GALNT1 UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 yes no 0 0 0 8 0 1 46.762 46.811 3 2.4804E-16 12188 20230619_1888_Aki_TMTPro18x_K_F8 166.3 145.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13065 1547 12356 25075 20141 20141 1 9606 Homo sapiens 0.03716279239756659 IHLFDIDVPGK Unmodified 1252.6816 0.68157298 4576 V9HW91;Q9NQR4;H7C579;B4DFB1 HEL-S-8a;NIT2 Omega-amidase NIT2 yes no 0 0 0 8 0 1 60.436 60.473 3 0.00029348 18025 20230619_1888_Aki_TMTPro18x_K_F8 103.22 76.106 82722 55788 72880 85352 80791 91765 85990 90954 110440 77475 83219 83899 83274 80115 82621 96502 82609 98563 76331 51348 75051 83803 83515 92237 87146 92612 109940 79287 86679 84807 85034 83591 84111 96787 79151 93535 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 385530000 13066 4576 12357 25076 20142;20143 20142 2 9606 Homo sapiens 0.06533945602905078 IHLMQNGKR Unmodified 1095.5971 0.59713184 670 A0A994J7L5;J3KQA0;A0A024RBE9;P21579;A0A994J5A7;A4FU00;Q8N9I0 SYT1;SYT2 Synaptotagmin-1;Synaptotagmin-2 yes no 0 0 1 4 0 1 40.622 40.665 4 0.063768 9805 20230619_1883_Aki_TMTPro18x_K_F4 41.029 1.881 168870 136630 159750 168680 148360 182740 195630 180540 226470 220190 222570 223420 244530 203780 191670 256930 254220 238150 156070 125360 162970 167910 156460 183630 195420 185680 228810 220540 229450 226050 246400 213650 199640 256100 242520 226450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 264470000 13067 670 12358 25077 20144 20144 1 9606 Homo sapiens 0.05315716305199203 IHLQQQQQQLLQEETLPR Unmodified 2229.1866 0.18657858 2759 C9JRJ5;Q9UGP4 LIMD1 LIM domain-containing protein 1 yes no 0 0 0 6 0 1 50.693 50.77 3 2.5129000000000003E-30 14254 20230619_1886_Aki_TMTPro18x_K_F6 226.25 216.97 12748 7702.8 12399 16522 11493 13261 12760 12173 17239 13671 17581 15234 19673 11915 13090 16038 16123 17377 11766 7128.9 12635 15894 12057 13617 12932 12565 17305 13791 18086 15295 19665 12642 13611 16115 15406 16486 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54171000 13068 2759 12359 25078 20145 20145 1 9606 Homo sapiens 0.12115275095447942 IHMGSCAENTAK Oxidation (M) 1333.5755 0.5754697 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHJ0;A0A5F9ZHD4;A0A5F9ZI66 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 1 0 6.25 1.09 1 2 1 32.002 32.041 3 2.3527E-06 6285 20230619_1885_Aki_TMTPro18x_K_F5 143 126.9 48540 21231 38160 43113 56770 44332 56013 58166 63419 52333 52187 51551 61765 52522 48148 62446 68912 62966 44674 19669 39921 41733 57358 45058 56727 58291 63734 53188 54478 52435 62117 54677 50419 62580 65693 59822 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 72727000 13069 1208 12360 25079;25080;25081;25082 20146;20147;20148;20149;20150;20151 20146 745 6 9606 Homo sapiens -0.07797501296363407 IHMGSCAENTAK Unmodified 1317.5806 0.58055508 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHJ0;A0A5F9ZHD4;A0A5F9ZI66 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 6.5 0.5 1 1 37.082 37.148 3 3.0609E-06 8432 20230619_1886_Aki_TMTPro18x_K_F6 143 129.33 34428 18674 34834 39042 44687 41197 44923 46943 47557 46115 59690 53942 46154 48892 38488 47410 62270 61822 31770 17285 35520 37751 45571 41610 45373 47531 48752 46880 60022 54255 47254 50497 40634 48448 59346 58568 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137620000 13070 1208 12360 25083;25084 20152;20153 20152 2 9606 Homo sapiens -0.06553197433731839 IHNADVTLR Unmodified 1037.5618 0.56179219 4705 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 6.5 0.5 1 1 35.869 35.935 3 3.2858E-05 7934 20230619_1886_Aki_TMTPro18x_K_F6 152.97 110.78 141020 78623 126670 140150 163290 141630 148480 149840 178580 165620 165560 147980 171240 136720 131360 193780 180970 157560 130030 72584 130450 136410 166080 143310 151490 152920 179750 166020 170550 150780 172690 144420 137350 191600 172510 150120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 380580000 13071 4705 12361 25085;25086 20154;20155 20154 2 9606 Homo sapiens 0.0445137704903118 IHNAELQR Unmodified 979.51993 0.51992738 2038 A8K4A8;Q6PI48;Q9H9J7;Q9NVT8;A0A3B3IS01;A0A3B3IT01;A0A3B3ISK7 DARS2 Aspartate--tRNA ligase, mitochondrial yes no 0 0 0 4.5 0.5 1 1 30.665 30.736 3 0.00034153 5952 20230619_1885_Aki_TMTPro18x_K_F5 138.78 98.517 203230 122350 245330 239810 403430 304300 289480 377470 275460 189780 277170 288780 236830 209820 301980 130700 295360 229220 187930 113070 247870 233300 402150 304570 298300 375220 281250 204740 282790 285890 246120 214890 304560 138740 282210 216910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122360000 13072 2038 12362 25087;25088 20156;20157 20157 2 9606 Homo sapiens 0.029348213605203455 IHNAENIQPGEQK Unmodified 1476.7321 0.732105 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;A0A6Q8PFB2;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;C9J2Z7;C9K073 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 4 0.816 1 1 1 37.231 37.294 3 5.1583E-11 8455 20230619_1883_Aki_TMTPro18x_K_F4 140.16 119.5 338500 137990 291410 339730 329650 304810 308580 332950 466890 455390 437350 436910 523780 424850 306060 468290 464560 467120 311660 128340 300690 325660 338780 311340 317310 341440 465730 453210 453510 443880 521460 441080 324690 469370 442980 443670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 499550000 13073 1676;2901 12363 25089;25090;25091 20158;20159;20160 20159 3 9606 Homo sapiens 0.012808231899725797 IHNANPELTDGQIQAMLR Unmodified 2020.016 0.016007775 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8;B4DIG6;B4DWK9;B4DIW1;B4DK31;B4DIR2 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 6.5 0.5 1 1 52.642 52.716 3 1.9131E-38 14790 20230619_1887_Aki_TMTPro18x_K_F7 246.34 226.51 31364 19294 27806 32292 24190 28250 26467 27827 30195 30915 30219 29563 34536 31728 30706 36125 53209 33935 28929 17787 28512 31467 25500 28844 26687 28549 30567 31042 31189 30159 34977 32879 32552 36096 50559 32326 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 574670000 13074 3833 12364 25092;25093 20161 20161 1 9606 Homo sapiens 0.04680041172309757 IHNFGLIQEK Unmodified 1197.6506 0.6506072 2373 B3KPA6;B4DEA8;P49748-2;P49748;P49748-3;B3KPX1;J3KSR4 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 1 0 1 48.99 48.99 3 0.0086928 13944 20230619_1880_Aki_TMTPro18x_K_F1 77.744 53.362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13075 2373 12365 25094 20162 20162 1 9606 Homo sapiens 0.05968792288695113 IHNHLPEIQK Unmodified 1227.6724 0.67240528 878 E7EVY0;A0A384NLA7;A0A087X0L7;J3KNA0;Q15070-2;Q15070;Q2M1J6;C9JC63;Q15070-3 OXA1L Mitochondrial inner membrane protein OXA1L yes no 0 0 0 8 0 1 39.834 39.823 3 0.025531 9401 20230619_1888_Aki_TMTPro18x_K_F8 58.63 46.404 52603 27665 53572 62605 65340 66597 62399 71444 77587 57903 74402 80104 70584 62958 64124 63162 75665 77152 48540 25647 54565 60337 66833 67093 63576 72279 77973 59933 76349 79719 71881 65508 65950 64263 72295 73126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30783000 13076 878 12366 25095 20163 20163 1 9606 Homo sapiens 0.0676759703726475 IHNLIPVMLR Unmodified 1204.7114 0.71143332 4260 Q8NI60;B4DED1;Q5T7A2;B4DVB7;Q8NI60-3;B4DU83;B4DN23;Q8NI60-2;Q8NI60-4 ADCK3 Atypical kinase ADCK3, mitochondrial yes no 0 0 0 7 0 1 55.558 55.618 3 2.6305E-05 16019 20230619_1887_Aki_TMTPro18x_K_F7 143.37 94.87 20867 11718 21302 21489 21644 20201 23942 24143 25159 17662 21086 22546 22286 20714 19814 28510 61514 24476 19261 10822 21605 20874 22482 20608 24047 24225 25372 18353 21890 22631 22666 21820 22521 28273 58196 23426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15734000 13077 4260 12367 25096 20164 20164 1 9606 Homo sapiens 0.11726606067281864 IHNPDEPETR Unmodified 1206.5629 0.56291441 2712 B7ZLK2;B7ZLK1;Q86YS7;Q86YS7-2;Q86YS7-3;Q86YS7-4 KIAA0528;C2CD5 C2 domain-containing protein 5 yes no 0 0 0 1 0 1 30.258 30.258 3 2.8604E-07 6086 20230619_1880_Aki_TMTPro18x_K_F1 160.77 150.25 20906 8907.4 18337 22452 26103 23506 21457 29557 30040 22036 33847 32509 26789 25792 27796 21634 31582 33426 19254 8286.2 18974 21551 26355 23812 22190 29555 30222 22992 34226 32304 27632 26604 28422 22489 30193 31617 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24167000 13078 2712 12368 25097 20165 20165 1 9606 Homo sapiens -0.03210453372730626 IHPELLAK Unmodified 919.5491 0.54910224 55 Q9P0M6;A0A024QZP6;A0A7I2V423;A0A7I2V412;Q9HA11;A0A7I2YQD6;A0A7I2YQR8;A0A7I2V6E9;A0A7I2V2N7;A0A7I2V522;A0A7I2V3Z8;A0A7I2V3M7;A0A7I2V3R0 H2AFY2 Core histone macro-H2A.2;Core histone macro-H2A;Histone H2A yes no 0 0 0 8 0 1 46.451 46.496 3 0.00071976 12057 20230619_1888_Aki_TMTPro18x_K_F8 124.98 79.902 462810 331670 392760 486030 481300 526540 540810 495640 519860 496750 495110 503830 565420 428610 492760 567280 518950 504130 427080 305040 406770 478370 494470 528500 540990 508700 529940 502190 512340 508740 571040 452080 504200 564110 496170 479550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 613710000 13079 55 12369 25098 20166 20166 1 9606 Homo sapiens 0.08610965656805547 IHPMAYQLQLQAASNFK Unmodified 1959.0037 0.003652175 3202 P67870;Q5SRQ6;N0E4C7;A0A1U9X7J2;A0A7I2YQ78;N0E638 CSNK2B Casein kinase II subunit beta yes no 0 0 0 5 0 1 57.388 57.447 3 0.00014369 16845 20230619_1885_Aki_TMTPro18x_K_F5 88.311 79.602 106750 83500 99975 98420 94578 127950 117650 118400 128410 136640 121540 118160 144770 113720 111970 130320 123240 117510 98633 76588 102070 98580 99485 126870 117630 122050 130030 136550 126000 120630 145390 118380 115160 129940 117770 111770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61668000 13080 3202 12370 25099 20167 20167 1 9606 Homo sapiens 0.06251049499974215 IHPQTIIAGWR Unmodified 1290.7197 0.71968982 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 5.5 0.5 1 1 50.144 50.22 3 1.8679E-09 13809 20230619_1885_Aki_TMTPro18x_K_F5 187.16 132.75 113100 97662 109170 107830 104700 121230 115200 124150 140140 99335 100850 100880 107340 86994 107240 106310 115930 108020 104590 89490 111160 108300 109470 121640 116340 125940 139670 101830 105620 101910 109340 91243 109520 106630 110790 102610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 754900000 13081 3756 12371 25100;25101 20168 20168 1 9606 Homo sapiens 0.08595876308277184 IHPVSTMVK Oxidation (M) 1026.5532 0.55320134 1577 P07195;Q5U077;A0A5F9ZHM4;A0A3B3IS95;Q59G78 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 1 0 2 0.816 1 1 1 38.102 38.141 3 5.1065E-05 9222 20230619_1880_Aki_TMTPro18x_K_F1 143.03 98.831 735670 633420 645880 631540 939370 1826900 823430 720740 2019400 285650 258430 265420 269750 247380 391380 349960 372790 277390 679790 579920 668930 652740 958630 1729100 871630 800690 1913500 316620 348330 270310 281870 261020 394540 346130 356200 264580 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1430200000 13082 1577 12372 25102;25103;25104 20169;20170;20171 20169 1031 3 9606 Homo sapiens 0.04098687088207953 IHPVSTMVK Unmodified 1010.5583 0.55828672 1577 P07195;Q5U077;A0A5F9ZHM4;A0A3B3IS95;Q59G78 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 2.5 0.5 1 1 41.917 41.988 3 4.8747E-06 10702 20230619_1881_Aki_TMTPro18x_K_F2 169.09 127.1 1145300 875830 964330 927250 1243600 2643400 1194000 1120300 2762600 486710 387350 431970 459820 391840 615940 568410 566340 505650 1057200 802620 1000300 953420 1282400 2504100 1252400 1231900 2623400 531020 512450 440290 475770 414830 620540 565000 541930 481160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1558099999.9999998 13083 1577 12372 25105;25106 20172;20173 20172 2 9606 Homo sapiens 0.053429909508281526 IHQEGDALPGHSK Unmodified 1387.6844 0.68442653 3956 Q1ED39;H3BPL4 KNOP1 Lysine-rich nucleolar protein 1 yes no 0 0 0 4 0 1 34.306 34.357 4 7.2444E-08 7272 20230619_1883_Aki_TMTPro18x_K_F4 157.86 136.31 33843 12376 26146 36648 34214 33579 36921 38707 58294 43270 44796 58821 64092 55935 29898 66464 63496 69887 31127 11567 27384 34916 34999 34267 37705 39320 57611 43996 47481 58899 63228 58337 33060 66698 60472 66319 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36861000 13084 3956 12373 25107 20174 20174 1 9606 Homo sapiens 0.006091689898084951 IHQETFGK Unmodified 958.48723 0.48723027 3931 Q15393;A8K6V3;Q15393-2;J3QL37 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 7.5 0.5 1 1 39.097 39.122 3 0.0003019 8915 20230619_1887_Aki_TMTPro18x_K_F7 149.72 81.497 176940 83253 142540 189900 199450 162840 195660 182080 250200 170700 227650 220490 193520 191050 159600 189070 208130 214770 162920 77245 148740 182420 202270 167120 199070 184520 250540 174780 233000 220630 197200 197810 165740 191410 198720 203690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 466650000 13085 3931 12374 25108;25109 20175 20175 1 9606 Homo sapiens 0.006326142376678945 IHQIGPGMVQQIQSVCMECQGHGER Unmodified 2878.3095 0.30950573 3532 P31689;P31689-2;B7Z5C0;Q9NXZ8 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 yes no 0 0 0 4.5 3.5 1 1 50.142 50.18 4 1.9056E-53 14386 20230619_1880_Aki_TMTPro18x_K_F1 249.34 240.17 40341 23754 47578 43719 39959 41507 41515 46437 49352 52877 51897 41970 61399 44858 42476 61024 49774 52024 37292 21933 47581 42471 42120 42231 42056 47253 49973 52757 53451 43261 61413 47066 44032 60503 47569 49500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 350470000 13086 3532 12375 25110;25111 20176;20177;20178 20176 3 9606 Homo sapiens -0.054516638937002426 IHQIGPGMVQQIQSVCMECQGHGER Oxidation (M) 2894.3044 0.30442036 3532 P31689;P31689-2;B7Z5C0;Q9NXZ8 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 yes no 0 1 0 8 0 1 48.298 48.364 4 5.4703E-05 12897 20230619_1888_Aki_TMTPro18x_K_F8 79.025 75.983 25530 20666 25608 24749 27982 25947 29874 23117 38867 27185 23597 22147 30677 20102 23736 32393 27035 28227 23606 18956 26033 24680 28901 26101 30261 23942 38459 27137 25223 22661 30725 21481 24489 32091 25843 26850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77514000 13087 3532 12375 25112 20179 20179 2195 1 9606 Homo sapiens -0.06695967756286336 IHSEIVK Unmodified 824.4756 0.47560295 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 6 0.816 1 1 1 38.439 38.519 3 0.00034362 8909 20230619_1886_Aki_TMTPro18x_K_F6 170.06 72.989 162030 79236 145670 167590 217640 201020 199560 182990 267280 184190 252020 251390 212880 206160 208990 202900 269470 246240 149320 73402 150520 162230 219720 200260 204220 188290 267460 188320 257550 250630 218560 213880 215870 206430 257080 233510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 338010000 13088 3432 12376 25113;25114;25115 20180 20180 1 9606 Homo sapiens 0.05634417214344012 IHSQEEALR Unmodified 1081.5516 0.55162144 2956 F2Z2Y4;V9HWC3;O00764-3;O00764-2;O00764 PDXK;HEL-S-1a Pyridoxal kinase yes no 0 0 0 2.5 0.5 1 1 31.383 31.446 3 4.6759E-23 6153 20230619_1882_Aki_TMTPro18x_K_F3 186.78 155.71 12009 8112.3 11958 14205 17185 22089 15343 17039 22307 12962 20168 18615 15957 17816 13146 15595 25586 18084 11092 7480 12249 13930 17425 21600 15790 17640 22200 13516 20589 18627 16331 18266 14113 15843 24308 17177 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34495000 13089 2956 12377 25116;25117 20181;20182 20182 2 9606 Homo sapiens 0.014107693237974672 IHTDFEK Unmodified 888.43413 0.43413207 3129 J3KQ32;Q9NTK5;Q53SQ6;Q9NTK5-2 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 0 4 0 1 41.501 41.544 3 0.0003343 10178 20230619_1883_Aki_TMTPro18x_K_F4 161.68 64.614 207310 90152 166380 173700 213860 177730 198350 189520 248630 207820 236360 214480 235890 209370 189650 236910 245900 199200 190820 83453 173090 168500 217680 179710 202400 193320 249840 209370 242840 217400 238680 217480 197010 235420 234410 189770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 429950000 13090 3129 12378 25118 20183 20183 1 9606 Homo sapiens -0.014547635449957852 IHTGDRPYK Unmodified 1085.5618 0.56179219 1733 B4DQU6;D3DUR9;A0A804HJE2;Q8TF68-3;Q8TF68-2;Q8TF68;A0A804HJ42;Q5T0B9;O43309-2;O43309 ZNF384;ZNF362;ZSCAN12 Zinc finger protein 384;Zinc finger protein 362;Zinc finger and SCAN domain-containing protein 12 yes no 0 0 1 8 0 1 32.821 32.821 4 0.0094467 6640 20230619_1888_Aki_TMTPro18x_K_F8 70.1 7.2772 69362 38870 64386 71648 84450 86312 83920 91402 110780 94028 108800 111170 114020 102520 79476 96691 121030 121800 63973 35900 66164 69804 86115 86239 85472 93057 111210 95441 111910 111760 114640 105740 83807 98623 115400 115410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21178000 13091 1733 12379 25119 20184 20184 1 9606 Homo sapiens 0.02243377049035189 IHTLELK Unmodified 852.5069 0.50690308 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24;E2PSM9 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 8 0 1 45.249 45.277 3 3.7736E-06 11564 20230619_1888_Aki_TMTPro18x_K_F8 197.65 73.273 490760 191260 403210 557420 553390 506960 552970 518330 695400 583310 629050 647480 627170 505850 520000 674390 619430 566830 451630 178600 419970 531220 562510 516310 561670 530800 697430 588160 648410 649660 634980 535240 536990 668560 591340 539710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 403160000 13092 2414 12380 25120 20185 20185 1 9606 Homo sapiens 0.07474990248431368 IHVFYIDYGNR Unmodified 1395.6935 0.69353465 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 2.5 0.5 1 1 52.822 52.868 3 3.093E-09 15691 20230619_1881_Aki_TMTPro18x_K_F2 182.46 175.33 61934 26285 53397 58693 47210 51044 55756 39143 64579 62493 45746 71093 68902 47484 55376 73033 57048 65809 57032 24396 54886 56436 49779 51883 55957 41526 64604 62180 49009 70878 68879 51140 56741 72521 54627 62550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 300370000 13093 1229 12381 25121;25122 20186 20186 1 9606 Homo sapiens 0.011515623461491487 IHVIDHSGAR Unmodified 1103.5836 0.58359027 1550 A0A494C0X0;Q99426-2;Q99426;K7EP07;K7EK42 TBCB Tubulin-folding cofactor B yes no 0 0 0 6 0.816 1 1 1 30.041 30.112 3 5.8475E-10 5851 20230619_1886_Aki_TMTPro18x_K_F6 173.37 127 56743 29601 46205 43450 61806 52337 56473 62809 73775 53232 63194 65204 65006 57895 53253 53926 49446 67750 52269 27268 48010 42872 62751 52508 57785 63152 73693 54701 65410 65395 65735 59754 54159 55035 47473 64136 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 65223000 13094 1550 12382 25123;25124;25125 20187;20188;20189 20188 3 9606 Homo sapiens 0.03594181797620877 IHVILAQK Unmodified 920.58074 0.58073672 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3;Q9BTE3-3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 0 4 0 1 46.386 46.429 3 0.00047352 12360 20230619_1883_Aki_TMTPro18x_K_F4 138.85 89.49 131780 74824 99848 107880 133230 178030 140810 129820 197620 30925 33077 33553 35490 25694 48525 38899 35900 38906 121380 68879 104690 107060 136380 173430 143080 133320 190990 37010 41820 33786 36812 27481 48365 38905 34492 36942 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61533000 13095 1140 12383 25126 20190 20190 1 9606 Homo sapiens 0.11726958410747557 IHVLEAQDLIAK Unmodified 1348.7715 0.77145062 644 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8;Q9BSJ8-2 FAM62A;ESYT1 Extended synaptotagmin-1 yes no 0 0 0 7 0 1 55.165 55.226 3 8.0883E-05 15843 20230619_1887_Aki_TMTPro18x_K_F7 113.65 86.534 144720 85893 131620 139970 136220 149020 153800 148130 186410 159760 162050 148400 184730 142750 152930 163850 134430 146530 133490 79171 134920 136970 141660 149910 155030 151710 187040 160560 168290 151030 186170 148610 155110 163340 128890 139320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1131300000 13096 644 12384 25127 20191 20191 1 9606 Homo sapiens 0.11101575211500858 IHVWNGESGIK Unmodified 1238.6408 0.6407708 223 Q6UXN9;A0A024R333 WDR82;TMEM113 WD repeat-containing protein 82 yes no 0 0 0 8 0 1 47.121 47.17 3 0.00017507 12370 20230619_1888_Aki_TMTPro18x_K_F8 113.38 92.149 66619 38105 68207 73482 75844 74392 69103 73279 90133 65642 68601 70077 69829 61622 81714 76657 66898 75800 61497 35214 69282 71254 77952 75096 70730 74742 89717 66931 71493 70679 71803 64625 82042 76764 64212 71972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102530000 13097 223 12385 25128 20192 20192 1 9606 Homo sapiens 0.03099604283329427 IHYIGQNEPELLVAHAYTR Unmodified 2223.1437 0.14365113 3103 I3L159;I3L1F5;Q6IBP2;Q6FHB5;Q53HF1;P30519;B3KSE0;A0A087WT44;P30519-2 HMOX2 Heme oxygenase 2 yes no 0 0 0 7.5 0.5 1 1 51.124 51.201 4 1.7422E-19 14033 20230619_1888_Aki_TMTPro18x_K_F8 181.94 174.43 170180 157170 175910 161330 167860 156130 176320 152530 178650 184810 190330 168300 183040 144120 185130 192260 200370 149760 157530 143890 177960 162660 174940 158380 177400 157030 182400 184530 194300 170870 187070 152010 189070 190060 191210 142880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 807500000 13098 3103 12386 25129;25130 20193;20194 20194 2 9606 Homo sapiens 0.08100505038100891 IHYLDTTTLIEPVSR Unmodified 1756.9359 0.93594977 1078 L7RT18;A0A0S2Z3Q4;P46108;A0A0S2Z3K9;P46108-2;I3L297 CRK Adapter molecule crk yes no 0 0 0 7 0 1 55.148 55.209 3 2.1251E-14 15822 20230619_1887_Aki_TMTPro18x_K_F7 187.16 162.87 65534 48011 58967 73142 64141 74552 72271 67954 68723 62294 66996 54114 60535 53293 64401 62577 58914 58042 60508 44172 60620 71764 66453 75088 72283 69756 70120 63027 68472 55340 62173 55487 65108 62495 56416 55179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 388730000 13099 1078 12387 25131 20195 20195 1 9606 Homo sapiens 0.08775922840777639 IIADIFEYTAK Unmodified 1282.6809 0.68090428 752 A0A0S2Z4X4;T1WHH0;A0A2S1PH13;A0A2S1PH16;B2R6K1;A0A2S1PH34;A0A2S1PH23;A0A2S1PH20;A0A2S1PH09;A0A024RD82;P22033;A0A2S1PH31;A0A2S1PH46;A0A0G3IFT0 MUT Methylmalonyl-CoA mutase, mitochondrial yes no 0 0 0 8 0 1 64.935 64.954 2 9.3922E-05 19940 20230619_1888_Aki_TMTPro18x_K_F8 158.79 118.74 21318 20508 23146 25534 23713 26989 27705 22034 29187 28640 31063 37204 31076 28669 32592 30207 31777 40821 19748 18807 23387 25386 24690 27069 27739 23057 29724 28855 31834 37057 31799 29937 33060 30932 30474 38627 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38569000 13100 752 12388 25132 20196 20196 1 9606 Homo sapiens 0.0508710616325061 IIAEGANGPTTPEADK Unmodified 1582.7839 0.7838658 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;P00367-3;A0A804HJD7;B3KT18;P00367-2;P49448;A0A140VK14;Q9BSD0 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 3.5 0.5 1 1 48.153 48.213 3 0.00024109 13355 20230619_1882_Aki_TMTPro18x_K_F3 88.311 74.648 88955 93382 119390 107880 111880 120710 132430 130250 139590 124040 135570 147950 131500 115930 140700 132770 135850 163460 82633 85550 118580 108000 117230 121330 132580 132240 141580 126410 139240 147980 134800 121540 142610 134890 130220 154830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126150000 13101 2542 12389 25133;25134 20197 20197 1 9606 Homo sapiens 0.015785220932230004 IIAFVGSPVEDNEK Unmodified 1516.7773 0.77732386 3655 P55036;Q5VWC4;P55036-2;A6PVX3 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes no 0 0 0 5 0 1 61.347 61.398 3 4.1845E-09 18516 20230619_1885_Aki_TMTPro18x_K_F5 163.51 143.67 239570 194460 202050 239790 224470 284570 254740 249970 230200 306000 259090 288470 304400 221070 247540 316200 276780 353310 221230 178410 209000 238960 232480 283470 254360 259230 237540 305520 266650 291220 306270 235580 254740 318040 265070 334900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 338350000 13102 3655 12390 25135 20198 20198 1 9606 Homo sapiens 0.039606289325320176 IIAHAQLLEQHR Unmodified 1427.7997 0.79973106 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 4.5 3.5 1 1 41.122 41.118 4 4.2848E-13 10562 20230619_1880_Aki_TMTPro18x_K_F1 204 164.29 116660 93155 114470 113950 138460 154150 129990 131380 169980 134650 142280 121230 136700 110340 145860 152160 143930 109290 107840 85468 116820 113900 141780 152290 132780 135830 169710 135600 146920 123440 140100 116360 148080 149840 137490 104390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 483730000 13103 2980 12391 25136;25137 20199;20200 20199 2 9606 Homo sapiens 0.10294317911439066 IIALDGDTK Unmodified 944.51786 0.51786169 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8 HEL107;TKT Transketolase yes no 0 0 0 5 0.816 1 1 1 53.364 53.42 2;3 0.00018299 15207 20230619_1885_Aki_TMTPro18x_K_F5 128.36 72.858 598900 481960 491910 539790 516760 606910 533130 551140 1246700 794790 861180 853270 882350 779340 709620 986510 968810 847410 552910 441800 509260 541350 537360 607450 558150 573340 1212600 793350 901980 861330 892340 816880 740430 979480 923600 806790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 702170000 13104 3523 12392 25138;25139;25140 20201;20202;20203 20202 3 9606 Homo sapiens 0.043383478320379254 IIAPANLERPVR Unmodified 1347.7987 0.79866842 993 A0A0C4DG21;F8WAL6;Q9NYB9-2;Q9NYB9;E7EW77;Q9NYB9-4;A0A7D9NKC8;E7EP65;E9PEZ7;Q9NYB9-3;Q53RS4;B7Z836 ABI2;ABI-2 Abl interactor 2 yes no 0 0 1 2.5 0.5 1 1 45.409 45.487 3 7.999E-08 12087 20230619_1882_Aki_TMTPro18x_K_F3 167.83 81.823 111920 98986 102100 105000 94973 113200 104940 120430 118400 116610 119550 131920 125780 111200 138390 134820 137650 149150 103460 90664 104440 105720 99584 114030 105720 122380 119920 118490 123010 132520 128800 116630 140440 135910 131790 141460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154520000 13105 993 12393 25141;25142 20204 20204 1 9606 Homo sapiens 0.13868103542540666 IIAPPER Unmodified 794.46504 0.46503826 3112;3679;2695;4827 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;B3KW67;Q7Z7J6;A0A804HKV3;P63267-2;B4DUI8;B3KPP5;P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;Q96FU6;Q96DE1;A5GZ75;A4UCT3;F1BXA6;Q562R1;A0A2R8YFE2;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;B3KUD3;V9HVZ7 ACTA1;ACTC1;ACTA2;ACTG2;ACTG1;ACTBL2;ACTB;PS1TP5BP1;HEL-176 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 0 0 5.5 1.71 1 1 1 1 1 1 41.834 41.893 2 0.013271 10216 20230619_1885_Aki_TMTPro18x_K_F5 114.19 36.242 1333100 1080900 1123200 1311500 1554700 1817900 1573800 1479400 1985600 1558000 1590300 1580200 1843800 1432000 1473500 1634600 1756700 1525700 1231000 991580 1166400 1311700 1583200 1791700 1597400 1536800 1982900 1572400 1660900 1598300 1855600 1493200 1521200 1633000 1676400 1451100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 39801000000 13106 2695;3112;3679;4827 12394 25143;25144;25145;25146;25147;25148 20205;20206;20207 20206 3 9606 Homo sapiens 0.05958434559897796 IIAPPERK Unmodified 922.56 0.56000128 3112;3679;2695;4827 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;B3KW67;Q7Z7J6;A0A804HKV3;P63267-2;B4DUI8;B3KPP5;P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;Q96FU6;Q96DE1;A5GZ75;A4UCT3;F1BXA6;Q562R1;A0A2R8YFE2;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;B3KUD3;V9HVZ7 ACTA1;ACTC1;ACTA2;ACTG2;ACTG1;ACTBL2;ACTB;PS1TP5BP1;HEL-176 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 0 1 4.57 2.44 1 1 1 1 1 1 1 40.436 40.489 3 0.0022428 9831 20230619_1882_Aki_TMTPro18x_K_F3 109.36 78.283 2526400 1892200 2118500 2248200 3359100 2892800 2831900 3011500 3640200 2910400 2997100 2817200 3431900 2586500 2350800 3475900 3442200 2644100 2331800 1736000 2204400 2250200 3372700 2881200 2910000 3063900 3636600 2945300 3121500 2858700 3436600 2723000 2475600 3429100 3277400 2523100 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 31003000000 13107 2695;3112;3679;4827 12395 25149;25150;25151;25152;25153;25154;25155 20208;20209;20210;20211;20212 20211 5 9606 Homo sapiens 0.09562368031083679 IIATVLMTEDIK Unmodified 1345.7527 0.75268901 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;C9J2Z7;C9K073 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 7.5 0.5 1 1 64.309 64.334 3 0.00019908 19803 20230619_1887_Aki_TMTPro18x_K_F7 80.69 50.755 56852 45116 63191 67318 48388 69854 66030 64403 68367 73570 78564 76408 86063 73136 69355 81413 82060 89945 52608 41484 63491 66163 52007 70252 65657 66434 69938 73947 80429 77344 86805 76006 71588 82123 78446 85311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163890000 13108 1676;2901 12396 25156;25157 20213 20213 1 9606 Homo sapiens 0.09364277525446596 IICILSHPIK Unmodified 1192.7002 0.70019993 1080 A0A0S2Z3X8;P31150;B4DHX4;B4E070 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 6 0 1 58.003 58.072 3 0.00017036 17340 20230619_1886_Aki_TMTPro18x_K_F6 120.09 87.62 112110 109570 116020 117570 105350 130390 111830 111130 128580 32193 30626 27996 31597 27087 54652 31333 32153 30278 103820 100330 117390 118290 110560 130430 112880 112800 125820 36829 36123 28663 33345 28199 53796 31438 30969 28776 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28724000 13109 1080 12397 25158 20214 20214 1 9606 Homo sapiens 0.11155783973140387 IICQGFTGK Unmodified 1022.5219 0.52190122 2059 Q6IAL5;B2R8A1;A8K4W7;P53597;A0A494C0D1;B7Z438;H7C233 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes no 0 0 0 2.5 0.5 1 1 51.321 51.378 3 0.004632 14750 20230619_1882_Aki_TMTPro18x_K_F3 73.573 48.187 240380 184450 222700 217400 269250 302860 278940 276090 323080 289210 302610 308280 367930 302550 286700 338920 324820 303240 222060 169190 228390 218010 276370 299140 282000 284160 325830 292290 314280 311970 369520 314180 295340 337900 310270 288480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265290000 13110 2059 12398 25159;25160 20215 20215 1 9606 Homo sapiens 0.0115411405413397 IIDAALR Unmodified 770.46504 0.46503826 3068 H3BNX8;P20674;H3BRM5;H3BV69 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes no 0 0 0 7 0.816 1 1 1 50.463 50.541 2 0.006446 13797 20230619_1887_Aki_TMTPro18x_K_F7 132.96 46.448 861470 707620 771460 843900 977020 1057800 1040000 1044700 1244600 870560 1025200 1027500 1077700 928080 935430 1093500 1073800 1104400 795900 648990 794800 843940 1000500 1053100 1050800 1063400 1246300 894640 1064400 1033200 1091800 969210 962240 1096400 1026300 1048800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3016599999.9999995 13111 3068 12399 25161;25162;25163 20216;20217;20218 20217 3 9606 Homo sapiens 0.07062434559895792 IIDKEGDDYEVIPNSNFYVSR Unmodified 2472.1809 0.18088408 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JVD8;C9J578 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 1 5.5 0.5 1 1 59.348 59.406 3 1.2012E-22 17655 20230619_1885_Aki_TMTPro18x_K_F5 181.51 168.58 230480 209320 239770 212950 195080 202440 228450 210520 182440 280260 276160 200070 241900 165260 271480 212560 187760 143200 213340 191630 241920 214850 206780 205880 227190 216400 192570 276810 277030 205670 248910 174270 270590 209210 180150 136910 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 140040000 13112 4593 12400 25164;25165 20219;20220;20221;20222 20219 4 9606 Homo sapiens 0.003680870024709293 IIDVVYNASNNELVR Unmodified 1717.8999 0.89989861 3707 Q5JR94;P62241;Q5JR95 RPS8 40S ribosomal protein S8 yes no 0 0 0 7.5 0.5 1 1 62.492 62.523 3 2.085E-33 18851 20230619_1888_Aki_TMTPro18x_K_F8 254.58 222.06 795110 674850 779400 923710 649650 734660 829130 793160 818660 829060 667700 788030 1005700 802760 684940 1280800 939480 972800 735270 619750 791990 909680 689820 758460 825390 807770 829410 834680 707630 803040 1000500 852660 719510 1260200 896660 927120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2473000000 13113 3707 12401 25166;25167 20223;20224 20224 2 9606 Homo sapiens 0.06966465663913368 IIECTHCGCR Unmodified 1304.5424 0.54239544 3574 P41223;C9JCD9 BUD31 Protein BUD31 homolog yes no 0 0 0 5 0.816 1 1 1 33.177 33.238 3 3.0182E-10 6952 20230619_1886_Aki_TMTPro18x_K_F6 209.73 201.21 82372 60226 71446 77664 89397 95346 91185 87088 118230 89088 100730 94722 105690 82280 82182 98212 117560 92544 76033 55306 73795 77217 91528 94882 92630 89596 118130 90171 104310 95524 106580 86149 86009 98082 111970 88050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 196150000 13114 3574 12402 25168;25169;25170 20225;20226 20226 2 9606 Homo sapiens -0.09769406620034715 IIEDQQESLNK Unmodified 1315.662 0.66195975 2662 B5BUB5;P05455;Q14730;Q9UMH5 SSB Lupus La protein yes no 0 0 0 3.5 0.5 1 1 48.327 48.387 3 6.6701E-06 13398 20230619_1882_Aki_TMTPro18x_K_F3 144.55 82.785 351970 299710 335380 356530 428190 420320 382610 422380 508790 370420 410530 430620 449190 349230 370360 505200 452490 447720 325410 274840 343510 356300 436040 420390 392340 429840 506940 379180 427550 431960 453390 371170 383280 501540 432110 425870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 981390000 13115 2662 12403 25171;25172 20227 20227 1 9606 Homo sapiens 0.01675524801521533 IIEETLALK Unmodified 1028.6118 0.61176208 3234 Q53R19;O15144;C9JTV5;G5E9J0;G5E9S7 ARPC2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 6.5 0.5 1 1 62.219 62.27 2;3 0.00030789 19116 20230619_1886_Aki_TMTPro18x_K_F6 157.68 125.46 132050 111940 121860 139900 132810 166490 142860 142090 140570 161930 153800 149240 166630 148560 156220 176660 165130 175720 122050 102700 124940 139290 137500 165720 143420 147370 144010 162190 157740 152100 169210 154740 159640 176970 157980 166870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124360000 13116 3234 12404 25173;25174 20228;20229 20228 2 9606 Homo sapiens 0.09860066934311362 IIENAENEYQTAISENYQTMSDTTFK Unmodified 3039.3655 0.36552632 3638 P52907;A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 yes no 0 0 0 5 0 1 63.863 63.909 3 3.5019E-49 19705 20230619_1885_Aki_TMTPro18x_K_F5 221.04 211.71 29718 24371 30723 32882 24599 29294 27132 28416 33059 47856 42107 48040 49070 40552 43911 52757 48463 50674 27488 22381 31044 32456 26127 29872 27423 29614 33784 47301 43120 48476 49607 42726 45043 52677 46340 48144 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127680000 13117 3638 12405 25175 20230 20230 1 9606 Homo sapiens -0.07258182490613763 IIEPIQSR Unmodified 954.54983 0.54983053 2664 Q75MT5;B5BUD2;P35250-2;P35250;A0A087WVY3;H7C5P4 RFC2 Replication factor C subunit 2 yes no 0 0 0 5.5 0.5 1 1 45.372 45.454 2 0.02701 11890 20230619_1886_Aki_TMTPro18x_K_F6 82.75 30.269 262920 176620 253660 245880 286630 294840 280090 284830 358030 306220 412460 435030 443750 369080 321080 402430 478770 449830 242770 162390 258860 243260 294910 294190 285280 292260 362230 312350 421950 433620 446130 384660 337770 406300 456360 426860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290030000 13118 2664 12406 25176;25177 20231 20231 1 9606 Homo sapiens 0.0707376030584328 IIEPNEVTHSGDTGVETDGR Unmodified 2124.9924 0.99235502 4578 Q9NQW7-4;Q9NQW7-3;B4E2P4 XPNPEP1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 1.5 0.5 1 1 44.168 44.21 3 5.9211E-16 11966 20230619_1880_Aki_TMTPro18x_K_F1 147.25 137.45 40227 34085 40968 44604 49343 52887 51139 44377 59407 51454 52226 53506 58418 52096 51372 59129 58463 59187 37211 31287 41706 44274 50629 52658 51687 46134 59760 51721 54201 54182 59116 54146 52796 59291 55874 56213 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91408000 13119 4578 12407 25178;25179 20232;20233 20232 2 9606 Homo sapiens -0.025141458511825476 IIETPGIR Unmodified 897.52837 0.5283668 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 6 0.816 1 1 1 47.243 47.324 2 0.00015302 12319 20230619_1887_Aki_TMTPro18x_K_F7 172.97 114.29 355010 284550 298720 338370 312200 378720 372510 354130 440440 405610 410280 471630 517530 437450 377340 574970 557270 653940 327800 260990 308650 337820 325320 379290 374110 364950 443690 409320 427350 474740 518340 459770 397220 579300 532120 619920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 685160000 13120 1723 12408 25180;25181;25182 20234;20235 20235 2 9606 Homo sapiens 0.07550375277139665 IIEVGDTPK Unmodified 970.53351 0.53351176 1833 P61619;A0A8V8TMZ5;B4DR61;B3KNF6;C9JXC6;A0A8V8TMZ3;A0A8V8TN19;F8W776;Q8TC24;B3KQ68;Q9H9S3-2;Q9H9S3-3;Q9H9S3;A0A8V8TN25;A0A8V8TNG8;H7C1Q9;C9JJV4;A6NIF9;F2Z2C7;A6NK38;H7C069 SEC61A1;SEC61A2 Protein transport protein Sec61 subunit alpha isoform 1;Protein transport protein Sec61 subunit alpha isoform 2 yes no 0 0 0 4.67 0.471 1 2 50.525 50.586 2;3 3.6741E-06 13987 20230619_1885_Aki_TMTPro18x_K_F5 208.37 139.17 322850 254690 298370 323930 369630 367470 396580 350330 418740 396530 442460 457840 453090 359190 372340 463240 460710 457440 298270 233770 306350 321990 378700 367990 398840 360460 426230 400150 453350 458700 458130 379330 385420 463250 439930 434550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 417060000 13121 1833 12409 25183;25184;25185 20236;20237 20237 2 9606 Homo sapiens 0.04706634349099659 IIFDDFR Unmodified 924.47052 0.47051757 247 A0A024R3J7;P46977;P46977-2 hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 0 0 5.5 0.5 1 1 60.394 60.449 2 0.0085671 18278 20230619_1886_Aki_TMTPro18x_K_F6 128.48 97.181 222390 200900 225910 243880 256400 299870 297270 298040 327990 292850 294520 320100 344820 294420 339290 347310 320580 361290 205800 184220 229830 243510 265110 298880 298250 304410 331040 297140 306220 322870 350060 307350 344140 348940 307190 342860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1125000000 13122 247 12410 25186;25187 20238;20239 20239 2 9606 Homo sapiens 0.0052611335171377505 IIFEDDR Unmodified 906.4447 0.44469675 1477 A0A384NPU2;P49773;D6REP8;D6RE99;H0YC49;D6RD60;A0A6Q8PGQ8;D6RC06 HINT1 Histidine triad nucleotide-binding protein 1 yes no 0 0 0 2 0.816 1 1 1 50.097 50.139 2 0.0029784 14437 20230619_1880_Aki_TMTPro18x_K_F1 158.12 97.156 1682800 1413800 1524500 1688700 1320600 1678600 1786100 1729500 1917500 2012500 2141400 2275100 2229300 1903500 1875300 2420800 2323300 2550100 1555100 1296600 1560200 1682900 1402400 1699000 1778200 1771400 1955100 2026200 2191000 2285200 2255900 2003200 1941000 2429900 2220200 2419900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2522400000 13123 1477 12411 25188;25189;25190 20240;20241 20240 2 9606 Homo sapiens -0.012267808905789934 IIFLHGK Unmodified 826.50651 0.50650915 1436 A0A384MTI8;Q96C86;Q53G42 DCPS m7GpppX diphosphatase yes no 0 0 0 4.5 0.5 1 1 49.976 50.032 3 0.0061129 13742 20230619_1885_Aki_TMTPro18x_K_F5 102.98 48.455 304610 243510 265350 303010 303480 348540 354180 349030 396980 362570 346540 347540 386800 315220 377280 401810 357140 349720 281320 223460 273680 301700 313790 348950 355380 356850 400010 365300 359780 352480 392930 330800 382830 399450 341850 332750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 338520000 13124 1436 12412 25191;25192 20242;20243 20243 2 9606 Homo sapiens 0.08631615319222874 IIFMASK Unmodified 808.4517 0.45169638 4746 Q9Y5B9;Q0VGA3 SUPT16H FACT complex subunit SPT16 yes no 0 0 0 4.5 0.5 1 1 58.284 58.313 2 0.0090158 17225 20230619_1885_Aki_TMTPro18x_K_F5 119.89 25.736 239790 187720 217320 210130 207430 227590 236990 231240 283320 161690 147930 111360 131370 99571 196290 134540 131790 109700 221500 172090 222430 210720 217130 228940 238600 234130 280230 165820 157330 115100 137610 105020 194550 133460 126560 104540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 151660000 13125 4746 12413 25193;25194 20244;20245 20245 2 9606 Homo sapiens 0.039808604563063454 IIFSPVAPK Unmodified 970.58515 0.5851534 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2;O15294-4 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 0 4.5 0.5 1 1 58.519 58.548 3 0.0019024 17744 20230619_1883_Aki_TMTPro18x_K_F4 91.069 62.325 40899 36548 38178 44551 35944 46284 36647 40054 49242 43015 42672 41126 47662 36496 45965 55240 52266 42374 37819 33517 39015 44347 37615 46515 37317 41430 49186 43275 44302 41716 48391 38789 47166 54463 49878 40420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33630000 13126 1842 12414 25195;25196 20246 20246 1 9606 Homo sapiens 0.09868422833653767 IIFVDEVFK Unmodified 1108.6168 0.61684746 809 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 0 0 0 7 0 1 64.076 64.106 3 0.091895 19693 20230619_1887_Aki_TMTPro18x_K_F7 49.418 31.982 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13127 809 12415 25197 20247 20247 1 9606 Homo sapiens 0.06688370796950949 IIFVVGGPGSGK Unmodified 1129.6495 0.64954457 3375 Q6FGX9;Q53EY8;Q5T9B7;P00568 AK1 Adenylate kinase isoenzyme 1 yes no 0 0 0 4.5 0.5 1 1 60.448 60.476 3 0.00014011 18078 20230619_1885_Aki_TMTPro18x_K_F5 105.83 84.072 176810 146920 158330 167820 158740 178280 191880 209060 233030 225120 225300 241040 257190 213870 238370 240520 234120 262400 163370 134680 162460 167990 165850 180210 192850 211790 234790 227110 233040 243000 260530 222980 242510 242500 224240 248890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 420230000 13128 3375 12416 25198;25199 20248;20249 20249 2 9606 Homo sapiens 0.08990577919826137 IIGATDSCGDLMFLMK Oxidation (M) 1786.8304 0.83036376 3587 V9HWG0;P45973;Q6I9T7 HEL25;CBX5 Chromobox protein homolog 5 yes no 0 1 0 8 0 1 63.303 63.325 3 3.4871E-08 19236 20230619_1888_Aki_TMTPro18x_K_F8 125.61 107.69 36219 31533 34170 35323 31632 33347 32236 34231 35849 40037 43847 33767 45581 37163 42818 40102 41853 41154 33489 28898 34843 35351 33069 33909 32609 35062 36656 39959 44620 34716 46312 38398 43520 40324 40049 39080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209120000 13129 3587 12417 25200 20250 20250 2256 1 9606 Homo sapiens -0.03157820663022903 IIGATDSSGELMFLMK Oxidation (M) 1727.8474 0.84739403 1933;3135 A4D177;Q13185;J3KS05;Q6IBN6;P83916;B5MD17;K7ELA4 CBX3;CBX1 Chromobox protein homolog 3;Chromobox protein homolog 1 no no 0 1 0 7.67 0.471 1 2 63.224 63.251 3 2.1851E-11 19258 20230619_1887_Aki_TMTPro18x_K_F7 159.08 141.6 137160 137540 142000 136600 144050 142450 158420 148990 149460 141360 152240 136720 151190 120930 167640 174830 196220 178370 127040 125850 143830 138230 149650 143880 158650 151580 152870 143120 155990 138640 155110 128170 171790 174980 187350 169440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1843899999.9999998 13130 1933;3135 12418 25201;25202;25203 20251;20252 20251 1237 2 9606 Homo sapiens 0.012584232144263297 IIGATDSSGELMFLMK Unmodified 1711.8525 0.85247941 1933;3135 A4D177;Q13185;J3KS05;Q6IBN6;P83916;B5MD17;K7ELA4 CBX3;CBX1 Chromobox protein homolog 3;Chromobox protein homolog 1 no no 0 0 0 7.5 0.5 1 1 64.534 64.559 3 2.2073E-14 19768 20230619_1888_Aki_TMTPro18x_K_F8 171.29 153.19 89529 65673 89148 82177 69817 83524 87522 100100 97044 108840 81704 79633 103000 75905 108900 106180 103010 91091 82728 60288 90262 81704 74578 84719 87579 101280 97845 108590 85516 82046 104650 80088 110280 105390 98531 86723 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1246800000 13131 1933;3135 12418 25204;25205 20253 20253 1 9606 Homo sapiens 0.02502727077057898 IIGIMEEVADGFK Unmodified 1420.7272 0.72720254 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 7 0 1 67.04 67.063 3 0.0002304 20932 20230619_1887_Aki_TMTPro18x_K_F7 106.49 86.396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13132 1853 12419 25206 20254 20254 1 9606 Homo sapiens 0.03366803002995766 IIGLDQVAGMSETALPGAFK Oxidation (M) 2033.0503 0.050327596 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1 MYH9 Myosin-9 yes no 0 1 0 1 0 1 63.096 63.096 3 0.0017768 19756 20230619_1880_Aki_TMTPro18x_K_F1 69.188 55.561 11078 8455.2 9080.1 9305.9 7513.4 10766 8623.2 8502.7 10639 11158 12106 13494 14091 12685 10602 13476 11844 16846 10224 7751.2 9369.4 9349.1 7986.6 10721 8697.7 8916.6 10787 11209 12444 13561 14156 13155 10928 13709 11355 15947 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32560000 13133 148 12420 25207 20255 20255 72 1 9606 Homo sapiens 0.07512444540566321 IIGLDQVAGMSETALPGAFK Unmodified 2017.0554 0.055412974 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1 MYH9 Myosin-9 yes no 0 0 0 1.5 0.5 1 1 64.396 64.4 3 1.0191E-29 20567 20230619_1881_Aki_TMTPro18x_K_F2 202.07 179.92 41574 36703 42369 42946 39595 47896 56814 51303 49507 63583 57710 57250 73719 51330 60765 75352 62208 66077 38468 33647 42955 42940 41804 48131 56052 52504 51254 63372 59528 58230 74029 54461 62180 74770 59533 62844 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85209000 13134 148 12420 25208;25209 20256 20256 1 9606 Homo sapiens 0.08756748403175152 IIGLKPEGVPR Unmodified 1177.7183 0.71829284 3652 P54709;C9JA36;D3DNF9;P54709-2;H7C4L9;Q58I18 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes no 0 0 1 3 0 1 49.447 49.524 3 0.0023195 13895 20230619_1882_Aki_TMTPro18x_K_F3 92.611 63.653 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13135 3652 12421 25210 20257 20257 1 9606 Homo sapiens 0.13654242219513435 IIGVDINK Unmodified 870.51747 0.51746776 3436 Q6IRT1;Q6FI45;P11766;Q5U043;Q2VIM7;H0YAG8 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 yes no 0 0 0 7.5 0.5 1 1 54.632 54.699 2;3 0.0012861 15566 20230619_1888_Aki_TMTPro18x_K_F8 100.39 57.144 132000 103900 109330 115320 143500 180900 129690 118560 208290 142390 158790 167380 173500 143130 151820 182420 177270 177800 121860 95244 113510 116350 146380 176490 133900 126070 205580 143630 165910 168000 175600 150510 156340 182330 169360 168920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139030000 13136 3436 12422 25211;25212 20258;20259 20259 2 9606 Homo sapiens 0.07702972902859528 IIGVINEHK Unmodified 1021.592 0.59202969 4168 Q7Z478;H0Y8L1 DHX29 ATP-dependent RNA helicase DHX29 yes no 0 0 0 8 0 1 48.184 48.242 3 0.00036051 12757 20230619_1888_Aki_TMTPro18x_K_F8 117.31 68.672 92461 71939 83205 85852 85777 101600 96178 98251 120080 102800 115730 104390 112590 93768 90045 122050 125880 125410 85399 65993 85358 85782 89286 101460 97116 100710 120730 103740 118690 105630 113960 98591 94116 122270 120090 119080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60462000 13137 4168 12423 25213 20260;20261 20260 2 9606 Homo sapiens 0.08209735714240196 IIHEAGYSEEECK Unmodified 1563.6875 0.68752257 3738 P63096;P63096-2;A0A3B3IUA8 GNAI1 Guanine nucleotide-binding protein G(i) subunit alpha-1 yes no 0 0 0 2 0 1 41.709 41.785 3 3.6763E-08 10627 20230619_1881_Aki_TMTPro18x_K_F2 145.29 129.91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13138 3738 12424 25214 20262 20262 1 9606 Homo sapiens -0.07177368738348378 IIHEDGFSGEDVK Unmodified 1444.6834 0.68342347 1253 A0A142CHG9;P09471-2;P09471;Q8N6I9;B3KP89;A0A1W2PRJ7;A0A1W2PS82 GNAO1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 2 0.816 1 1 1 47.268 47.32 3 8.5317E-08 12908 20230619_1882_Aki_TMTPro18x_K_F3 148.69 137.64 513560 411440 494410 572260 512260 565290 554720 522750 545600 655880 721800 837700 716030 684900 713240 741830 803570 927440 474670 378000 504570 564370 531710 571110 556760 540890 563800 660990 732960 836490 731350 714360 730500 754870 768840 878460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 710580000 13139 1253 12425 25215;25216;25217 20263 20263 1 9606 Homo sapiens -0.02113090169791576 IIHEDGYSEDECK Unmodified 1593.6617 0.66170175 3415 P08754 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 0 0 0 2 0.816 1 1 1 42.144 42.191 3 5.5972E-08 10819 20230619_1881_Aki_TMTPro18x_K_F2 156.02 128.34 368240 208270 335430 354200 319190 309470 354490 348030 326300 862170 919420 998690 1107200 886060 647240 1008800 1047600 1059500 339590 192130 343260 344990 333380 317280 355080 366650 359770 846910 923500 1003300 1101800 924450 690310 1013600 998590 1005700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 682830000 13140 3415 12426 25218;25219;25220 20264;20265 20264 2 9606 Homo sapiens -0.11138262980671243 IIHEDGYSEEECR Unmodified 1635.6835 0.68349983 3385 P04899-4;P04899;Q96C71;P04899-2;B3KX51;P04899-6;P04899-3;P04899-5;Q93020 GNAI2;WUGSC:H_LUCA16.1 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes no 0 0 0 1.5 0.5 1 1 38.317 38.317 3 1.0089E-21 9343 20230619_1880_Aki_TMTPro18x_K_F1 235.31 215.22 42207 35152 41420 45603 51433 37012 59541 55548 57745 62750 88193 63384 70010 58307 55320 61769 76903 77725 39026 32265 42306 45102 52668 38557 59508 55669 60097 63019 88058 64236 71320 60535 57739 62889 73377 73652 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100930000 13141 3385 12427 25221;25222 20266;20267 20266 2 9606 Homo sapiens -0.10891458232072182 IIHFEIK Unmodified 898.52764 0.52763852 2513 B4DMW3;X5DNW2;B4DKF0;Q9Y2I2-2;Q9Y2I2-1;Q9Y2I2-5;Q9Y2I2-4;Q9Y2I2-6;Q9Y2I2 NTNG1 Netrin-G1 yes no 0 0 0 1 0 1 52.791 52.791 3 0.010836 15496 20230619_1880_Aki_TMTPro18x_K_F1 91.9 35.778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13142 2513 12428 25223 20268 20268 1 9606 Homo sapiens 0.07431580628087886 IIHGAGYSEEDKR Unmodified 1473.7212 0.72120596 3525 Q59FM5;P29992 GNA11 Guanine nucleotide-binding protein subunit alpha-11 yes no 0 0 1 5 0 1 36.243 36.335 4 0.00059493 8042 20230619_1885_Aki_TMTPro18x_K_F5 92.906 60.172 42569 30288 38467 45498 46943 34531 47094 47550 51684 47426 53367 44473 48345 40527 46501 45504 43129 32246 39299 27865 39567 44547 47964 36082 47619 47684 52445 47839 54396 45179 49397 42180 47123 44925 41223 30808 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20325000 13143 3525 12429 25224 20269 20269 1 9606 Homo sapiens 0.0032942081568307913 IIHGQDFDQR Unmodified 1227.5996 0.59963426 526 A0A024R8M0;Q14344 GNA13 Guanine nucleotide-binding protein subunit alpha-13 yes no 0 0 0 3.5 0.5 1 1 38.602 38.65 3 0.00011812 9042 20230619_1882_Aki_TMTPro18x_K_F3 126.67 101.29 201420 147260 180230 198410 206040 211340 200850 203240 243480 212830 242610 237300 234360 193740 216820 246250 267000 239310 185960 135290 185310 196300 211820 212560 204160 208470 245500 215370 248550 238400 238630 204060 223710 246150 254780 227470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168100000 13144 526 12430 25225;25226 20270;20271 20270 2 9606 Homo sapiens -0.005061567561824631 IIHNFIR Unmodified 911.53412 0.53412088 2416 B4DWZ7;B3KTN5;Q9NS86 LANCL2 LanC-like protein 2 yes no 0 0 0 5 0 1 44.866 44.944 3 0.0022111 11636 20230619_1885_Aki_TMTPro18x_K_F5 122.15 41.777 39862 27386 33482 38843 38766 45426 43804 41804 57178 40218 37383 38764 41792 37572 38836 37621 41398 39908 36773 25181 34662 38353 40042 45332 44258 42919 56662 40732 39490 39365 42397 38797 39675 37944 39574 37886 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22690000 13145 2416 12431 25227 20272 20272 1 9606 Homo sapiens 0.07481518579470503 IIIENKPK Unmodified 953.59097 0.59096706 3433 P11388;P11388-2;P11388-3;P11388-4 TOP2A DNA topoisomerase 2-alpha yes no 0 0 1 2 0 1 45.618 45.7 3 0.016551 12438 20230619_1881_Aki_TMTPro18x_K_F2 78.934 29.121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13146 3433 12432 25228 20273 20273 1 9606 Homo sapiens 0.11231521345325746 IIIPEIQK Unmodified 952.59572 0.59571809 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DS32 CSE1L Exportin-2 yes no 0 0 0 1 0 1 59.517 59.517 3 0.00048726 18281 20230619_1880_Aki_TMTPro18x_K_F1 124.83 73.489 194960 152960 179630 191770 178210 183370 196660 185470 201300 219940 223910 198980 243150 210330 218980 265500 198760 191130 180110 140380 183780 190390 185620 186170 197400 190310 205840 219790 229360 203530 246370 219380 222250 261660 190310 182360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153200000 13147 1462 12433 25229 20274 20274 1 9606 Homo sapiens 0.11752405488084605 IIIPPFLAYGEK Unmodified 1359.7802 0.78022439 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q6ZME7 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 0 0 3.5 0.5 1 1 64.776 64.797 3 6.4858E-07 20318 20230619_1883_Aki_TMTPro18x_K_F4 145.91 114.69 221210 179280 203720 180600 200150 231610 236210 240550 248050 240140 249940 294830 281670 242580 313660 281360 283360 323450 204400 164190 208240 183150 209250 230590 236490 245050 252130 244330 258200 294940 287970 254020 316550 284580 271690 306630 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 615040000 13148 167 12434 25230;25231 20275 20275 1 9606 Homo sapiens 0.11472548847950748 IIIQESALDYR Unmodified 1319.7085 0.70851601 4310 Q92896;Q92896-3;Q92896-2;Q6ZMF1 GLG1 Golgi apparatus protein 1 yes no 0 0 0 5 0 1 56.441 56.502 3 0.0064814 16458 20230619_1885_Aki_TMTPro18x_K_F5 64.64 52.414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13149 4310 12435 25232 20276 20276 1 9606 Homo sapiens 0.061450094234714925 IIKPVLTQESATYIAEEYSR Unmodified 2310.2107 0.21072764 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46;Q7Z6P5 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 1 7.5 0.5 1 1 61.019 61.057 3 1.1933E-44 18204 20230619_1888_Aki_TMTPro18x_K_F8 243.87 234.21 1343900 1030500 1199900 1297700 991130 1255200 1229700 1168500 1135100 1555600 1387100 1323900 1445100 1185300 1401000 1254700 1152900 987110 1241100 945910 1228400 1288000 1053600 1270300 1223800 1210400 1173900 1543600 1413800 1349000 1470000 1230900 1410800 1245700 1104400 941010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1113000000 13150 1104 12436 25233;25234 20277 20277 1 9606 Homo sapiens 0.10803070738484166 IILDLISESPIK Unmodified 1339.7963 0.79626839 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 2 0 1 65.983 65.99 3 6.6911E-12 21192 20230619_1881_Aki_TMTPro18x_K_F2 158.05 122.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13151 1865 12437 25235 20278 20278 1 9606 Homo sapiens 0.1399621029422633 IILEAEK Unmodified 814.48002 0.48001963 911 C9J931;Q6NZ61;A8K005;A0A090N900;Q15382 RHEB GTP-binding protein Rheb yes no 0 0 0 4.5 0.5 1 1 52.152 52.201 2 0.0061651 15003 20230619_1883_Aki_TMTPro18x_K_F4 135.16 27.074 563900 446880 501330 569190 505480 587470 546630 536250 651060 636270 719850 719920 686870 568780 652800 759000 756260 729720 520840 410180 514950 564890 526360 591430 552130 554230 659980 640240 733870 722110 700410 601700 670700 757720 722400 693500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 361110000 13152 911 12438 25236;25237 20279;20280 20279 2 9606 Homo sapiens 0.06535881637239527 IILEALR Unmodified 826.52764 0.52763852 3446 P13521;C9JQI2;C9JDT0 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 1.5 0.5 1 1 58.894 58.901 2 0.026043 18023 20230619_1880_Aki_TMTPro18x_K_F1 97.075 26.359 130910 123020 138900 179670 78795 108760 184940 183490 202390 62763 66558 53185 56962 49100 109810 72233 67451 46778 121220 113020 139860 175840 89560 116930 180740 179190 199160 69763 74306 54485 60994 51968 108180 70922 64803 44776 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42968000 13153 3446 12439 25238;25239 20281 20281 1 9606 Homo sapiens 0.10743580628093241 IILLAEGR Unmodified 883.5491 0.54910224 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 0 5.33 3.09 1 1 1 56.924 56.961 2 0.0025459 16517 20230619_1888_Aki_TMTPro18x_K_F8 125.01 35.334 983520 811130 854350 948030 819060 1000400 903380 884120 1018700 853730 818230 670670 774840 631100 841590 962960 832770 717830 908490 743770 878700 946860 857030 1004900 909620 910620 1022900 859310 846290 688840 795300 669770 854790 948300 796080 684820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1379100000 13154 1439 12440 25240;25241;25242 20282;20283;20284 20284 3 9606 Homo sapiens 0.10266965656808225 IILPEGAK Unmodified 839.51165 0.5116541 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 7.4 0.49 3 2 53.212 53.283 2;3 0.0022617 14566 20230619_1888_Aki_TMTPro18x_K_F8 98.392 62.207 771940 626970 699240 836700 713380 891990 840410 833600 985170 956350 1063200 1151600 1216400 992560 985920 1119300 1075700 1240200 713200 575720 717590 828130 744430 896060 844530 859150 998520 965980 1094300 1154700 1225300 1036100 1012300 1129200 1029500 1176100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1055999999.9999999 13155 3384 12441 25243;25244;25245;25246;25247 20285;20286;20287 20286 3 9606 Homo sapiens 0.08547874391183541 IILPPEK Unmodified 808.50584 0.50584045 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 7.67 0.471 1 2 53.275 53.347 2 0.038903 14906 20230619_1888_Aki_TMTPro18x_K_F8 81.784 57.449 245380 199770 256460 255400 242960 282240 317910 296280 325750 302290 304690 314800 329290 296370 317160 346060 352830 345780 226970 183360 259460 253760 255440 283630 316390 301900 330520 305590 314830 318440 334880 308880 324840 346880 337190 328460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 456200000 13156 1417 12442 25248;25249;25250 20288;20289;20290 20290 3 9606 Homo sapiens 0.09392775879518922 IILQSEGLR Unmodified 1027.6026 0.60259438 77 A0A024R045;O60671-2;O60671 hCG_37731;RAD1 Cell cycle checkpoint protein RAD1 yes no 0 0 0 7 0 1 50.823 50.9 2 0.0010882 13986 20230619_1887_Aki_TMTPro18x_K_F7 119.07 89.966 71820 57544 63117 67743 70162 84815 81972 71191 88105 76197 80555 72887 83921 66837 70487 82186 82193 77613 66335 52775 64994 67796 72712 84145 82116 73827 89074 76682 83092 73981 84885 69976 72620 82056 78497 73782 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37196000 13157 77 12443 25251 20291 20291 1 9606 Homo sapiens 0.0898971836866167 IILWDHDLNPER Unmodified 1519.7783 0.77832691 4548 Q9HC35;B5MBZ0;Q9HC35-2;B6EXY3;C1PHA1;J7MA22 EML4;EML4-ALK variant 7;EML4-ALK Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 0 6.5 0.5 1 1 56.17 56.236 3 9.0357E-10 16559 20230619_1886_Aki_TMTPro18x_K_F6 176.05 130.79 40135 34050 39740 34120 27994 38645 33715 33019 46589 34973 32129 34619 37702 33961 37071 39916 36606 38436 37118 31177 40194 34544 30248 38606 34073 34179 46131 35267 33911 35138 38292 35359 37698 39929 35042 36516 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190630000 13158 4548 12444 25252;25253 20292 20292 1 9606 Homo sapiens 0.03922888092074572 IIMCPQCDR Oxidation (M) 1207.5148 0.5147837 1714 A0A7P0TBI1;A0A7P0TBC5;Q4KMQ2-3;Q4KMQ2;Q4KMQ2-2;A0A7P0TAW4;A0A7P0TBD5;A0A7P0T8Y2;B4E1V1;A0A7P0TAF4;B4DZA5;Q4KMQ2-4;B3KX12 ANO6 Anoctamin-6;Anoctamin yes no 0 1 0 5.5 0.5 1 1 39.952 40.041 2 0.01262 9545 20230619_1886_Aki_TMTPro18x_K_F6 73.26 65.888 17601 14786 17891 21409 21702 21691 22626 22846 28668 18012 17214 18389 21494 19562 20123 19893 22333 19349 16280 13588 18228 21071 22254 21937 22935 23134 28382 18498 18400 18694 21753 20151 20605 19960 21326 18395 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14580000 13159 1714 12445 25254;25255 20293 20293 1114 1 9606 Homo sapiens -0.08067309880266293 IIMLFTDGGEER Unmodified 1379.6755 0.67550132 1875 A0A994J595;P54289-4;P54289-5;P54289;Q9UIU0;P54289-3;P54289-2;A0A994J5M8;Q9UDQ3 CACNA2D1;WUGSC:H_DJ0560O14.1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 4 0 1 63.473 63.479 2 0.0066966 19822 20230619_1883_Aki_TMTPro18x_K_F4 99.53 79.769 25472 23343 26466 25376 19317 22966 23584 26004 28422 29518 34031 32844 33915 30685 31474 35147 35917 39834 23579 21383 26687 25449 20762 23483 23709 26449 28901 29740 34637 33132 34515 31958 32315 35499 34350 37771 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20892000 13160 1875 12446 25256 20294 20294 1 9606 Homo sapiens 0.0008505930911724136 IINADSEDPK Unmodified 1100.535 0.53496832 1235 C9JX88;A0A140VK70;P35998;Q75L23;C9JLS9;B7Z571 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 3 0 1 45.666 45.742 2 0.00015433 12176 20230619_1882_Aki_TMTPro18x_K_F3 138.66 97.211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13161 1235 12447 25257 20295 20295 1 9606 Homo sapiens -0.011277763528141804 IINDNATYCR Unmodified 1238.5714 0.5713706 2138 A8K9K6;O00567;A0PJ92;A0A494C128;Q5JXT2 NOP56 Nucleolar protein 56 yes no 0 0 0 5.5 0.5 1 1 42.306 42.395 2 4.5517E-10 10508 20230619_1886_Aki_TMTPro18x_K_F6 214.83 184.67 184020 129160 165530 184670 180160 206350 201640 195850 215510 197450 205880 210080 223830 174540 191620 240950 280350 236640 169870 118770 170040 182150 186640 206700 202480 200870 218360 199870 212490 211580 226350 184780 200560 240660 267080 224960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 483030000 13162 2138 12448 25258;25259 20296;20297 20297 2 9606 Homo sapiens -0.03837222727770495 IINEPTAAAIAY Unmodified 1245.6605 0.66050319 2926 E9PK54 HSPA8 yes yes 0 0 0 4.5 0.5 1 1 62.017 62.043 2 0.0002313 18811 20230619_1885_Aki_TMTPro18x_K_F5 115.7 100.48 26183 26798 42170 32499 26944 44095 39135 40276 38502 47087 43429 53097 58236 50436 33750 52428 54923 56537 24371 24564 41243 32527 29577 43583 38769 41577 39509 47393 45014 53501 57824 52219 36020 52832 52357 53650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 325500000 13163 2926 12449 25260;25261 20298 20298 1 9606 Homo sapiens 0.047499355034233304 IINEPTAAAIAYGLDK Unmodified 1658.8879 0.88793694 3430;3429 P11142;V9HW22;E9PKE3;Q96IS6;B3KTV0;P11142-2;Q53HF2;B4E1Q1;E9PN89;B4DTX2;E9PLF4;P54652;A0A024R6B5;A0A384MDT7;E9PI65;V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HSPA8;HEL-S-72p;HSPA2;HEL-S-89n;HSPA5 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;78 kDa glucose-regulated protein no no 0 0 0 7.67 0.471 1 2 62.553 62.581 2;3 1.9202E-33 18883 20230619_1888_Aki_TMTPro18x_K_F8 306.27 226.03 2079300 1742500 1907100 2204200 1644200 2193700 2052700 2095400 2301600 2724100 2500500 2556000 2944000 2313800 2289100 3376700 2747200 2989400 1921700 1599000 1950000 2187500 1743200 2215900 2054600 2164400 2341300 2713600 2575400 2595200 2958500 2451500 2370700 3351000 2625700 2842500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 26992000000 13164 3430;3429 12450 25262;25263;25264 20299;20300;20301 20300 3 9606 Homo sapiens 0.08484848920738841 IINEPTAAAIAYGLDKK Unmodified 1786.9829 0.98289996 3430 P11142;V9HW22;E9PKE3;Q96IS6;B3KTV0;P11142-2;Q53HF2;B4E1Q1;E9PN89;B4DTX2;P54652;A0A024R6B5;A0A384MDT7;E9PI65 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 0 0 1 2 0 1 61.24 61.25 3 0.00024718 19170 20230619_1881_Aki_TMTPro18x_K_F2 83.966 64.128 56723 80564 77094 76208 63460 63552 83985 55730 69496 85737 77687 70870 64203 50191 82366 70656 59701 45746 52847 73625 76413 77218 67376 65145 83015 58391 72013 84556 78740 71886 66752 53527 82119 69336 57244 43765 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1094900000 13165 3430 12451 25265 20302 20302 1 9606 Homo sapiens 0.12088782391901987 IINEPTAAAIAYGLDKR Unmodified 1814.989 0.98904797 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 1 1.5 0.5 1 1 59.838 59.845 3 9.997E-19 18511 20230619_1881_Aki_TMTPro18x_K_F2 187.39 169.85 151540 201490 212640 166020 240720 173930 248280 198710 121050 158110 155260 59347 108480 52094 336180 41464 39293 25452 141140 183980 210980 171040 246750 176310 245980 200270 132080 158780 155540 64652 122370 53682 319820 41919 40370 24395 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1417300000 13166 3429 12452 25266;25267 20303 20303 1 9606 Homo sapiens 0.11415300623434632 IINNTENLVR Unmodified 1184.6513 0.65133548 183 A0A024R222;B4DHQ3;Q9Y617;A0A024R280;Q9Y617-2 PSAT1 Phosphoserine aminotransferase yes no 0 0 0 6.5 0.5 1 1 49.027 49.109 2 9.6221E-05 13145 20230619_1887_Aki_TMTPro18x_K_F7 143.21 70.98 496730 401940 449830 338170 308270 364170 315550 298790 326140 500980 586300 799260 548320 500770 655210 688520 669920 847770 458920 367610 457920 347730 331930 365210 318710 315430 342580 504020 589350 787020 566070 536140 665460 697600 642060 802870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1798799999.9999998 13167 183 12453 25268;25269 20304 20304 1 9606 Homo sapiens 0.06639586937717468 IINPMGLLVEELK Unmodified 1467.8371 0.83708734 1906 A1MA90;Q9H9J2 MRPL44 39S ribosomal protein L44, mitochondrial yes no 0 0 0 2 0 1 66.409 66.416 3 4.5792E-06 21375 20230619_1881_Aki_TMTPro18x_K_F2 104.24 71.015 7113.8 5357.2 8020.9 6719.7 8996.3 8774.7 7705.2 7933.3 8672 9593.4 9719.5 8975.1 10391 6390.9 10242 9972.2 9448.7 7652.3 6581.6 4917.5 8076.8 6704 9222 8701.1 7879 8203.5 8830.5 9584.2 9948.8 9054.8 10558 6874.9 10371 9835.4 9035.7 7299.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5261000 13168 1906 12454 25270 20305 20305 1 9606 Homo sapiens 0.12188228342188268 IINYRDDEK Unmodified 1164.5775 0.57750184 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8;F5H2X1;B7Z842;H3BUV0;H3BTM1;H3BRA2;H3BQD1 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 1 4 0.816 1 1 1 42.327 42.391 3 0.0022051 10565 20230619_1883_Aki_TMTPro18x_K_F4 82.261 52.727 234090 178070 199040 227150 252310 232660 256880 249460 287530 283870 325340 305320 335570 264870 252250 350810 369680 315570 216090 163480 206030 225430 257710 235350 259670 254630 292690 285680 332210 307820 338160 279120 264980 348890 352200 300300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203650000 13169 1601 12455 25271;25272;25273 20306 20306 1 9606 Homo sapiens 0.001796187754280254 IIPAVASTNAVIAAVCATEVFK Unmodified 2244.2188 0.21878991 2301 J3JZZ9;B2RBP3;Q8TBC4;Q8TBC4-2;F8W8D4;B7Z5F6 UBE1C;UBA3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 5 0 1 66.706 66.749 4 5.0272E-05 20879 20230619_1885_Aki_TMTPro18x_K_F5 85.231 73.066 4288.9 4072.4 4664.6 4827.1 4146.1 5396.5 5675.3 4144.3 5549.4 5378.7 7578.1 5317.1 5720.9 5174.7 5435.1 5122.2 6146.4 5492.4 3972.6 3732.9 4702.5 4819.9 4392 5384.1 5628.1 4358.8 5733.8 5371 7582.3 5403.1 5885 5339.3 5569.2 5170.9 5869.4 5215.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7773300 13170 2301 12456 25274 20307 20307 1 9606 Homo sapiens 0.1464492645422979 IIPGADADVVVWDPEATK Unmodified 1894.9676 0.96764382 4008 Q53SW3;Q9BPU6 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 5 0 1 63.297 63.343 3 0.0022761 19473 20230619_1885_Aki_TMTPro18x_K_F5 70.235 52.954 54863 45975 61497 58983 42471 52058 54209 52592 49823 70098 62426 81552 67076 57096 58897 76061 79505 79287 50789 42194 61618 58421 45937 53173 53896 54190 51610 70187 63794 81355 67942 60699 61265 76256 75869 75274 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131160000 13171 4008 12457 25275 20308 20308 1 9606 Homo sapiens 0.05595870804063452 IIPGFMCQGGDFTR Oxidation (M) 1613.733 0.73303298 2036 P62937;A8K486;V9HWF5;B2RE56;B4DM82;Q71V99;F8WE65;C9J5S7;A0A0B4J2A2;A0A075B767;A0A0H2UH34;P0DN26;F5H284;Q9Y536;A0A075B759 PPIA;HEL-S-69p;PPIAL4C;PPIAL4D;PPIAL4A;PPIAL4E Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4D;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C yes no 0 1 0 2.79 1.61 2 4 7 1 58.708 58.731 2;3 8.8529E-12 17507 20230619_1880_Aki_TMTPro18x_K_F1 174.46 163.73 301500 264330 293920 303460 302430 297360 304890 306140 337500 344800 345650 326610 370520 315630 354680 388090 347970 382590 278860 242280 299320 303290 313270 301540 308400 313200 342480 345840 355260 332180 376580 329810 360770 388430 333240 363320 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8772300000 13172 2036 12458 25276;25277;25278;25279;25280;25281;25282;25283;25284;25285;25286;25287;25288;25289 20309;20310;20311;20312;20313;20314;20315;20316;20317;20318 20309 1277 10 9606 Homo sapiens -0.04928421756994794 IIPGFMCQGGDFTR Unmodified 1597.7381 0.73811836 2036 P62937;A8K486;V9HWF5;B2RE56;B4DM82;Q71V99;F8WE65;C9J5S7;A0A0B4J2A2;A0A075B767;A0A0H2UH34;P0DN26;F5H284;Q9Y536;A0A075B759 PPIA;HEL-S-69p;PPIAL4C;PPIAL4D;PPIAL4A;PPIAL4E Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4D;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C yes no 0 0 0 2.29 1.03 2 2 2 1 61.973 61.987 2;3 7.3192E-49 19211 20230619_1882_Aki_TMTPro18x_K_F3 249.69 237.63 1184400 1056400 911760 1224500 858480 1218700 1205000 1269600 1277200 1619400 1427700 2416100 496490 2196400 423780 2828400 546720 1916900 1093700 968330 950450 1222600 907950 1233500 1197300 1303300 1303800 1641400 1423100 2407500 499320 2295400 434370 2774200 531400 1825300 3 3 3 3 3 3 3 3 3 3 3 3 2 3 2 3 3 3 38845000000 13173 2036 12458 25290;25291;25292;25293;25294;25295;25296 20319;20320;20321;20322 20321 4 9606 Homo sapiens -0.03684117894363226 IIPGGIADR Unmodified 910.52362 0.52361577 3005 G3V1D4;Q53FX5;Q9NUP9 LIN7C Protein lin-7 homolog C yes no 0 0 0 7 0 1 48.45 48.536 2 0.0002259 12914 20230619_1887_Aki_TMTPro18x_K_F7 118.32 36.084 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13174 3005 12459 25297 20323 20323 1 9606 Homo sapiens 0.06477491134353386 IIPLLTDPK Unmodified 1008.6219 0.62193284 3394 P07099;R4SBI6;Q6FGZ3 EPHX1 Epoxide hydrolase 1 yes no 0 0 0 2 0 1 62.448 62.457 3 0.0045066 19729 20230619_1881_Aki_TMTPro18x_K_F2 74.376 56.065 31958 27703 25519 32648 38334 43577 43425 42050 50395 43021 39724 40237 42317 40907 42132 45903 44615 42992 29513 25400 26707 32701 38970 43196 43668 43076 50512 43365 41385 41001 43140 42416 43003 45881 42652 40871 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48522000 13175 3394 12460 25298 20324 20324 1 9606 Homo sapiens 0.11796674659558448 IIPLVVK Unmodified 780.54731 0.54731133 2126 A8K8U1;Q86VP6;Q86VP6-2;H0YH27;Q86VP6-3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 4 0 1 61.057 61.06 2 9.0636E-05 18752 20230619_1883_Aki_TMTPro18x_K_F4 140.79 75.171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13176 2126 12461 25299 20325 20325 1 9606 Homo sapiens 0.14825956638844673 IIPLYSTLPPQQQQR Unmodified 1780.9836 0.98356866 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 5 0 1 58.946 59 3 0.00058195 17361 20230619_1885_Aki_TMTPro18x_K_F5 83.877 68.285 73235 66733 72533 72311 67645 80167 66561 81233 96158 76607 74512 71754 83593 65468 82066 78323 87389 87719 67761 61127 73658 72714 70725 80501 68140 82740 95391 77557 77851 72870 84933 68474 83746 79037 83564 83215 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 120690000 13177 3246 12462 25300 20326;20327 20326 2 9606 Homo sapiens 0.12431621831660777 IIPQGADSTMLATK Unmodified 1444.7596 0.7595653 511 A0A8Q3SHZ4;A0A494C1F2;A0A024R8B6;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A8Q3WLX1;Q7Z3C4;H0YF36 NUP214;DKFZp686J0330 Nuclear pore complex protein Nup214 yes no 0 0 0 1 0 1 56.813 56.813 3 0.043721 17177 20230619_1880_Aki_TMTPro18x_K_F1 54.09 37.866 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13178 511 12463 25301 20328 20328 1 9606 Homo sapiens 0.05497590406002928 IIPTLEEYQHYK Unmodified 1532.7875 0.78749461 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;Q5T6W2;A0A994J6T5 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 8 0 1 57.818 57.869 3 8.516E-10 16866 20230619_1888_Aki_TMTPro18x_K_F8 177.1 140.8 498610 488460 621230 602350 488170 601880 639480 628690 608980 760960 842080 710540 789920 670680 791870 826350 754050 921710 462560 447870 618870 599140 521560 609170 635520 643970 631760 760090 849970 722860 807700 701670 803380 833090 723000 873820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334530000 13179 1865 12464 25302 20329 20329 1 9606 Homo sapiens 0.04241236657730951 IIQAHGGTVDPTFTSR Unmodified 1698.8689 0.86893283 2467 B4DEQ6;Q6ZW49-2;Q6ZW49-1;Q6ZW49 PAXIP1 PAX-interacting protein 1 yes no 0 0 0 8 0 1 45.042 45.07 3 2.9819E-15 11510 20230619_1888_Aki_TMTPro18x_K_F8 180.56 154.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13180 2467 12465 25303 20330 20330 1 9606 Homo sapiens 0.047453123497007255 IIQEPPHK Unmodified 960.53927 0.53926584 1699 A0A7P0T8N8;O14776-2;O14776;G3V220;B7Z921 TCERG1 Transcription elongation regulator 1 yes no 0 0 0 6.5 0.5 1 1 40.718 40.798 3 0.0027661 9568 20230619_1887_Aki_TMTPro18x_K_F7 102.61 71.535 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13181 1699 12466 25304;25305 20331;20332 20332 2 9606 Homo sapiens 0.05741777651417124 IIQEPPHKK Unmodified 1088.6342 0.63422886 1699 A0A7P0T8N8;O14776-2;O14776;G3V220;B7Z921 TCERG1 Transcription elongation regulator 1 yes no 0 0 1 1.5 0.5 1 1 38.494 38.525 4 0.0010601 9120 20230619_1881_Aki_TMTPro18x_K_F2 103.78 64.765 77892 57190 68743 79212 93007 88681 86865 82759 106290 95030 111630 87608 96666 80620 93729 79696 103050 83394 71909 52557 71005 78278 94460 88843 88521 85289 107340 95196 113450 89084 98978 83369 95788 80373 98370 79241 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106490000 13182 1699 12467 25306;25307 20333 20333 1 9606 Homo sapiens 0.09345711122591638 IIQFNPGPEK Unmodified 1141.6132 0.61315906 2030 A8K3S1;P46926;D6RAY7;P46926-2;D6R9P4;D6RFF8;B3KMV2;D6R917;D6RB13 GNPDA1 Glucosamine-6-phosphate isomerase;Glucosamine-6-phosphate isomerase 1 yes no 0 0 0 7.5 0.5 1 1 54.751 54.816 3 0.0007003 15632 20230619_1888_Aki_TMTPro18x_K_F8 96.143 71.006 142050 115930 137570 160500 175060 169230 175820 182070 209690 119250 147970 143110 106160 103050 198950 143240 153430 121260 131310 106500 140810 158500 178740 170760 178220 183450 208870 124710 153040 142970 114180 109620 197840 142260 147020 115530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 481720000 13183 2030 12468 25308;25309 20334 20334 1 9606 Homo sapiens 0.04801701023075111 IIQFQATPCPK Unmodified 1301.6802 0.68019277 1701 Q06330;D6R927;A0A7P0Z4N7;A0A7P0TBJ4;Q06330-7;Q06330-6;Q06330-4;Q06330-5;A0A7P0T9Y9;A0A7P0T947;B7Z8D8;Q06330-3;A0A024R9Q8;Q06330-2 RBPJ;RBPSUH Recombining binding protein suppressor of hairless yes no 0 0 0 3 0 1 54.761 54.807 3 0.055202 16301 20230619_1882_Aki_TMTPro18x_K_F3 44.543 33.053 62088 58216 57035 61238 61529 78546 72930 67057 77327 75866 78084 67742 83659 66405 79035 96208 77663 81647 57425 53307 58474 61839 63949 77845 72991 69534 78565 75977 80264 69186 84950 70128 80473 95332 74348 77689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36119000 13184 1701 12469 25310 20335 20335 1 9606 Homo sapiens 0.0414198824248615 IIQGQGVDEPLSETGFK Unmodified 1816.9207 0.92069363 4570 Q9NQ88 TIGAR Fructose-2,6-bisphosphatase TIGAR yes yes 0 0 0 4 0 1 58.909 58.912 3 0.0020457 17868 20230619_1883_Aki_TMTPro18x_K_F4 69.069 56.089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13185 4570 12470 25311 20336 20336 1 9606 Homo sapiens 0.04491011252912358 IIQHLVPASFR Unmodified 1279.7401 0.74009091 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3;Q9BTE3-3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 0 6 0 1 53.777 53.854 3 4.2213E-07 15559 20230619_1886_Aki_TMTPro18x_K_F6 134.2 92.897 84026 65414 65914 78826 66542 81535 85934 76707 86304 78251 70279 60555 70455 53660 75210 76842 75701 62153 77534 60013 68571 78530 69679 82118 85494 78769 87256 78478 72833 62087 72095 56830 76426 76024 72332 59238 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357370000 13186 1140 12471 25312 20337 20337 1 9606 Homo sapiens 0.1114104696805498 IIQISSGR Unmodified 872.50797 0.50796571 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;H0Y9Y3;Q9UMS6;Q9UMS6-3 SYNPO2 Synaptopodin-2 yes no 0 0 0 3 0 1 45.382 45.458 2 0.0065878 12049 20230619_1882_Aki_TMTPro18x_K_F3 110.12 56.768 140230 112040 118330 124000 161490 166460 149110 160630 223540 179570 158040 159100 192930 144720 147650 212510 201560 183490 129480 102700 122700 124840 164100 165020 153290 164890 220900 179950 166700 162030 193620 153410 154260 210630 192200 174660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104210000 13187 4686 12472 25313 20338 20338 1 9606 Homo sapiens 0.0666120461733044 IIQLIEGK Unmodified 912.56442 0.56441796 3362 V9HWF9;O95861-4;O95861;A6NF51;O95861-2;O95861-3 HEL20;BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes no 0 0 0 1 0 1 62.661 62.661 3 0.0050022 19584 20230619_1880_Aki_TMTPro18x_K_F1 84.476 60.321 10591 9051.9 11315 11401 11030 14438 13969 14235 12743 15964 16868 20010 18438 15636 15193 18384 17963 24755 9801.1 8305.3 11435 11362 11567 14357 13882 14599 13228 16153 17201 19971 18613 16427 15679 18774 17207 23420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38359000 13188 3362 12473 25314 20339 20339 1 9606 Homo sapiens 0.10463832454001931 IIQLLDDYPK Unmodified 1216.6703 0.67033959 691 P05388;A8K4Z4;A0A024RBS2;F8VU65;P05388-2;Q53HW2;Q53HK9;F8VWS0;Q6NSF2;G3V210;F8VRK7;F8VQY6;Q8NHW5;F8VZS0;B4E3D5;F8VS58 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 7 0.816 1 1 1 63.347 63.381 3 2.4671E-07 19360 20230619_1887_Aki_TMTPro18x_K_F7 154.84 127.51 1168700 956430 1147400 1175600 1008400 1293900 1250400 1195200 1344700 1454800 1313800 1225900 1553200 1284000 1272300 1692800 1423800 1522400 1080500 877460 1165700 1170800 1066300 1296800 1249800 1234800 1364400 1449600 1359200 1257700 1564200 1344400 1309400 1683700 1361500 1447500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3539899999.9999995 13189 691 12474 25315;25316;25317 20340;20341 20340 2 9606 Homo sapiens 0.07067123508772966 IIQQAGQVWFPDSAFK Unmodified 1833.9414 0.94136949 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8;B4DIG6;B4DWK9;B4DIW1;B4DIR2 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 3 0 1 63.564 63.595 3 3.6931E-06 19949 20230619_1882_Aki_TMTPro18x_K_F3 114.64 98.875 28703 23045 28733 30644 25320 24692 23597 24665 26971 32536 30863 29389 36571 30256 28929 33895 31959 34851 26538 21161 29133 30243 26503 25432 24025 25420 27483 32359 31716 30009 36772 31385 29747 34044 30569 33081 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167760000 13190 3833 12475 25318 20342 20342 1 9606 Homo sapiens 0.057756464232397775 IIQTPGLWESENQNK Unmodified 1755.8792 0.87916317 4557 Q9NP72;Q9NP72-2;B7Z5V3;Q5W0J0;Q9NP72-3;Q59EW3;A0A804HJJ8;A0A804HKH8;A0A804HL88;A0A804HIY1 RAB18 Ras-related protein Rab-18 yes no 0 0 0 6.5 0.5 1 1 58.383 58.444 3 3.662E-25 17450 20230619_1886_Aki_TMTPro18x_K_F6 222.29 191.81 85670 93318 113380 114950 98094 109270 79193 108040 118940 121070 121600 104920 119020 118270 117500 118990 137520 142960 79593 85535 112610 114250 102610 110910 82345 110740 119080 121190 124400 107750 121620 121590 120620 120910 131420 135510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 479650000 13191 4557 12476 25319;25320 20343;20344 20343 2 9606 Homo sapiens 0.031458752842581816 IIQVGNR Unmodified 798.47119 0.47118627 2144;1327 A0A1W6S962;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9;A0A494C0Q7 GTF2I General transcription factor II-I no no 0 0 0 2 0.816 1 1 1 41.529 41.575 2 0.006298 10520 20230619_1881_Aki_TMTPro18x_K_F2 134.12 76.666 385120 301870 362640 396110 464120 468990 456560 400730 604190 354800 444710 394300 425960 359090 427280 301710 462130 406400 355840 277180 371960 393120 473790 467210 464990 413100 599860 362880 462640 397360 435450 368720 435640 310440 441440 385100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326810000 13192 1327;2144 12477 25321;25322;25323 20345 20345 1 9606 Homo sapiens 0.06388952791428437 IIRPSETAGR Unmodified 1098.6146 0.61455605 2873 E5KT65;P19388;B4DJ89;A0A087WWX0;A0A087WVZ9 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes no 0 0 1 4.5 3.04 1 1 1 1 33.476 33.509 3 0.00015014 6893 20230619_1888_Aki_TMTPro18x_K_F8 128.01 56.323 260030 197460 258510 274470 285420 300680 300250 301040 357030 323110 352020 339970 364070 301940 307880 408640 409430 350030 240320 181450 263230 271160 294680 302040 303650 308100 360230 325940 361790 343320 368590 318280 320200 405360 390350 333300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 207880000 13193 2873 12478 25324;25325;25326;25327 20346;20347;20348 20348 3 9606 Homo sapiens 0.06919335111842884 IISAAFEERHNAK Unmodified 1484.7736 0.77357588 1374 H3BMM5;B2RDH6;A0A2R8YF87;Q96AX1 VPS33A Vacuolar protein sorting-associated protein 33A yes no 0 0 1 6 0 1 40.831 40.924 4 0.074839 9928 20230619_1886_Aki_TMTPro18x_K_F6 50.207 5.6647 82584 65890 78930 74923 78144 89849 83913 70588 103560 98403 88399 82696 99387 75552 78507 104190 89795 88094 76323 60411 80449 75136 81451 89300 84855 74215 103830 97532 91830 84441 100050 79718 80964 103260 85795 83848 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85677000 13194 1374 12479 25328 20349 20349 1 9606 Homo sapiens 0.05058003949329759 IISAASEGGANVFTVSYFK Unmodified 1959.9942 0.99419293 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 3 0 1 63.474 63.505 3 4.2499000000000003E-20 19883 20230619_1882_Aki_TMTPro18x_K_F3 189.81 169.15 229030 177010 240610 218790 213740 220250 238160 236040 285860 267840 276150 273280 313270 244220 268720 316860 288810 328400 211800 162440 242890 217660 224700 223040 240280 240910 288140 269180 285370 276300 316280 256860 275420 317740 276420 311650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 469020000 13195 1207 12480 25329 20350 20350 1 9606 Homo sapiens 0.052595596954006396 IISDNLTYCK Unmodified 1225.6013 0.60127375 4712 Q9Y2X3;B3KN82;H7BZ72 NOP58 Nucleolar protein 58 yes no 0 0 0 7.5 0.5 1 1 53.906 53.975 2 9.9902E-06 15290 20230619_1888_Aki_TMTPro18x_K_F8 182.71 138.26 81151 62830 73388 76274 71256 84022 78726 78138 90175 82954 63610 68701 78183 63203 64869 87940 87560 86009 74953 57648 75184 76034 74457 84233 79298 80357 90210 83165 67185 70197 78720 66718 67575 87788 83547 81718 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 310070000 13196 4712 12481 25330;25331 20351 20351 1 9606 Homo sapiens -0.0025028378245224303 IISECSK Unmodified 835.41095 0.41095378 2627 B4DZ87;O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 0 6 0 1 43.178 43.272 2 0.016368 10896 20230619_1886_Aki_TMTPro18x_K_F6 98.299 40.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13197 2627 12482 25332 20352 20352 1 9606 Homo sapiens -0.013335256539676266 IISGQFLSDK Unmodified 1106.5972 0.59717465 804 Q9NQ66;A0A0D9SF51;Q9NQ66-2;A0A087WT80;A0A087WW73;A0A1B0GWB6;A0A0D9SG17;B3KXN8;B4DRC6;H0YCJ2;Q8IV92 PLCB1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1;Phosphoinositide phospholipase C yes no 0 0 0 1 0 1 57.924 57.924 3 0.087809 17672 20230619_1880_Aki_TMTPro18x_K_F1 30.729 15.585 27102 17491 24329 24926 21020 26706 29104 28259 29137 27053 25934 31085 36186 28613 29501 40005 32185 29454 25006 16088 24907 24583 22339 26887 28876 28734 29559 27528 27246 31302 36278 30186 30321 39399 30750 28098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37239000 13198 804 12483 25333 20353 20353 1 9606 Homo sapiens 0.048139947861727705 IISIFSGTEK Unmodified 1093.6019 0.60192568 3839 Q13177;A8K5M4 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase yes no 0 0 0 2.5 0.5 1 1 62.173 62.202 3 2.8802E-07 19561 20230619_1881_Aki_TMTPro18x_K_F2 127.76 90.048 55146 43446 51143 59221 44515 52294 50997 50298 56373 59160 60639 56141 59647 56377 57599 65243 65100 69818 50949 39908 52234 58401 46975 53349 51235 51785 57311 59227 61946 57164 60854 58605 59066 65654 62248 66248 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42779000 13199 3839 12484 25334;25335 20354;20355 20354 2 9606 Homo sapiens 0.058868789289590495 IISNASCTTNCLAPLAK Unmodified 1832.9125 0.91245391 3382 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q0QET7;A4UCT1;B4DRV9 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 3.2 0.748 1 2 2 56.728 56.748 3;4 1.1487E-09 16923 20230619_1883_Aki_TMTPro18x_K_F4 139.6 123.97 1030000 807300 882630 888830 700910 808090 1006000 987080 892140 1064000 788540 738000 1153600 805680 743920 1169600 918610 857650 951060 740000 906280 890570 750730 827600 993290 997980 912740 1060800 829350 766860 1145300 848780 775630 1150800 876810 818130 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 80309000000 13200 3382 12485 25336;25337;25338;25339;25340 20356;20357;20358;20359;20360 20359 5 9606 Homo sapiens 0.029314177403421127 IISNVPADSLIR Unmodified 1296.7402 0.74015049 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 0 8 0 1 56.535 56.592 2 0.075667 16395 20230619_1888_Aki_TMTPro18x_K_F8 56.548 32.458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13201 4666 12486 25341 20361 20361 1 9606 Homo sapiens 0.10365002177400129 IISSDRDLLAVVFYGTEK Unmodified 2025.0783 0.078256906 150 A0A024R1N4;P12956;B1AHC9;B2RDN9 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 1 2 0 1 64.074 64.082 3 1.4827E-13 20411 20230619_1881_Aki_TMTPro18x_K_F2 150.91 127.08 26879 19259 21603 22046 15606 25468 23315 15715 29288 25044 17562 26964 30643 28896 32645 28926 26873 38922 24794 17666 22307 22077 16980 25257 23223 17008 29044 24904 19225 27311 30974 29751 32823 29637 25851 36818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19449000 13202 150 12487 25342 20362 20362 1 9606 Homo sapiens 0.10672090792286326 IISSIEQK Unmodified 916.52295 0.52294707 3709 V9HW98;P62258;G9K389;G9K388;P62258-2;B4DJB0;B4DJF2;I3L3T1;K7EIT4 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 0 0 7 0.816 2 2 2 52.107 52.183 2;3 1.1225E-06 14550 20230619_1887_Aki_TMTPro18x_K_F7 198.07 75.332 949500 654310 732610 898270 814060 907150 805050 793980 1081600 1045800 1220300 1306300 1300700 1189400 995920 1464100 1602500 1604400 875450 601410 764380 886740 840050 913960 820930 826100 1091700 1051700 1249100 1310700 1311700 1245000 1054100 1473200 1527400 1522400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2426400000 13203 3709 12488 25343;25344;25345;25346;25347;25348 20363;20364;20365 20364 3 9606 Homo sapiens 0.06134651694674176 IISSIEQKEENK Unmodified 1416.746 0.74602373 3709 V9HW98;P62258;G9K389;G9K388;P62258-2;B4DJB0;B4DJF2;I3L3T1;K7EIT4 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 0 1 5.5 1.12 1 1 1 1 53.016 53.075 3 0.00039526 15226 20230619_1886_Aki_TMTPro18x_K_F6 96.103 71.544 269080 256760 281510 346280 261460 314400 255660 295700 251810 393090 409730 399380 368600 259200 279140 273670 322980 197440 249160 235670 285000 341770 273140 319840 258410 306000 263590 391800 410920 400020 372750 272850 287760 270680 307730 188800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 865270000 13204 3709 12489 25349;25350;25351;25352 20366 20366 1 9606 Homo sapiens 0.05432055898427279 IISVTPVK Unmodified 855.54295 0.54295423 3001 G1UI16;Q29RF7;B3KMN2;Q96DB6 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 0 3 0 1 52.802 52.861 3 0.050629 15441 20230619_1882_Aki_TMTPro18x_K_F3 52.716 25.462 105760 62816 79165 115350 108270 71751 103560 102310 77492 138590 154180 168300 135580 144370 60784 339950 327120 238200 97425 57996 83224 111500 109640 76635 103940 103460 83702 138840 153740 169140 135970 159710 79352 331840 309800 227650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21666000 13205 3001 12490 25353 20367 20367 1 9606 Homo sapiens 0.10940447425286948 IISYAQGFMLLR Unmodified 1410.7693 0.76934213 3630 P52209-2;P52209;B4E2U0;B4DL86;B4DV68;A9Z1X1;K7ELN9 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 7 0 1 64.625 64.652 2 0.00056819 19931 20230619_1887_Aki_TMTPro18x_K_F7 122.96 93.188 104860 92342 105220 93228 106260 117730 115860 125390 149010 67488 62732 61111 61983 56506 91445 65336 64968 58913 97010 84544 106800 94505 110600 117390 117260 125970 146230 71252 68450 62227 64731 58886 90860 65250 62375 56047 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31876000 13206 3630 12491 25354 20368;20369 20368 2 9606 Homo sapiens 0.08038823202059575 IITEGASILR Unmodified 1071.6288 0.62880913 1092 A0A0S2Z4B5;Q08209;A0A0S2Z4C6;Q08209-2;Q08209-3;Q08209-4;E9PK68;E9PPC8 PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase yes no 0 0 0 8 0 1 55.65 55.712 2 1.5881E-23 16015 20230619_1888_Aki_TMTPro18x_K_F8 219.19 140.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13207 1092 12492 25355 20370 20370 1 9606 Homo sapiens 0.09585987540140195 IITEGFEAAK Unmodified 1077.5706 0.57062555 765 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 5 1.41 1 1 1 1 1 55.983 56.031 3 1.191E-05 16274 20230619_1885_Aki_TMTPro18x_K_F5 123.6 72.805 598810 485220 497510 513700 534950 607620 554940 557820 644480 627420 657090 626400 749490 552930 617810 748910 606970 643860 552890 444560 514470 517920 553740 606330 561250 575100 652160 630410 677310 633840 755060 583380 630700 743190 581110 612520 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2879900000 13208 765 12493 25356;25357;25358;25359;25360 20371;20372;20373 20371 3 9606 Homo sapiens 0.03494305894855643 IITHPNFNGNTLDNDIMLIK Oxidation (M) 2298.1678 0.16781697 2772 CON__P00761 yes yes 0 1 0 8 0 1 61.114 61.146 3 0.0056635 18260 20230619_1888_Aki_TMTPro18x_K_F8 61.102 47.676 + 250310 136710 205240 245890 393630 252390 292480 237070 299800 320580 339500 322050 204410 239390 307790 271770 315610 298170 230630 126240 215080 239200 389870 254740 300800 245670 306760 319500 340590 323930 218270 251110 311410 274200 301780 282980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170160000 13209 2772 12494 25361 20374 20374 1653 1 0.07065977409411062 IITIPPFLAYGEDGDGK Unmodified 1804.9247 0.92471638 906 B7Z1U8;B3KQQ0;A0A090N8P3;O95302;O95302-3;B7Z230 FKBP9 Peptidyl-prolyl cis-trans isomerase FKBP9 yes no 0 0 0 8 0 1 64.963 64.982 3 0.01975 19961 20230619_1888_Aki_TMTPro18x_K_F8 51.888 29.355 8142.6 10856 8534.2 6454.6 6746 8711 8864.8 9970.9 10612 9330.3 8742.3 12208 10259 7377.3 11625 10049 11435 12124 7561.9 9893.4 8599.4 6933.8 7216.2 8678.2 8873.6 10075 10636 9546.7 9152.8 12086 10479 7917.5 11777 10176 10948 11491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15173000 13210 906 12495 25362 20375 20375 1 9606 Homo sapiens 0.054451007466013834 IITITGTQDQIQNAQYLLQNSVK Unmodified 2588.381 0.38098087 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;B3KU16 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 4 0 1 63.92 63.928 3 5.7835E-53 19999 20230619_1883_Aki_TMTPro18x_K_F4 243.18 231.56 16741 10531 12841 15541 14191 12991 16272 14572 14855 19080 19836 18448 21869 17394 17477 19253 19374 20886 15428 9691.9 13402 15244 14671 13371 16242 14907 15431 19013 20195 18722 22035 18086 17964 19405 18529 19815 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23480000 13211 1865 12496 25363 20376 20376 1 9606 Homo sapiens 0.15032561670113864 IITLAGPTNAIFK Unmodified 1357.7969 0.79693709 3930 Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DRD7;B4DLC0;F8W0G4;F8VXH9;F8W1G6 PCBP2 Poly(rC)-binding protein 2 yes no 0 0 0 6 0 1 63.012 63.06 3 0.00054418 19482 20230619_1886_Aki_TMTPro18x_K_F6 101.53 60.343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13212 3930 12497 25364 20377 20377 1 9606 Homo sapiens 0.13235049733930282 IITPLNK Unmodified 797.50109 0.50108942 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 3 0 1 52.19 52.256 2 0.0051616 15141 20230619_1882_Aki_TMTPro18x_K_F3 143.02 59.642 209740 177650 182930 206980 217730 243700 212660 233650 259520 238900 242570 224060 253140 198120 216950 273950 254560 225250 193780 162870 188720 207110 223430 243420 216210 239430 261080 240740 249980 227430 256230 209250 223630 271190 243000 214570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151870000 13213 81 12498 25365 20378 20378 1 9606 Homo sapiens 0.09423891736753376 IITSELYR Unmodified 993.5495 0.54949617 1528 Q13144;A0A3B3IUB1;A0A3B3IRP4;A0A3B3ITG6;A0A3B3ISX3;A0A3B3ISM8;A0A3B3IUF2;A0A3B3IS56;A0A3B3ISS1;A0A3B3ITQ2;A0A3B3ISV1;A0A3B3ISI2;A0A3B3IST9;A0A3B3ITK8 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes no 0 0 0 7.5 0.5 1 1 51.34 51.417 2 0.0054699 14233 20230619_1887_Aki_TMTPro18x_K_F7 113.41 84.262 613370 538960 563840 600590 595260 655230 652810 615000 702480 567060 559240 511730 534090 446390 601540 592660 614340 507060 567050 493880 577590 602350 617440 657680 656300 629930 706800 574240 579350 520110 549160 470310 611120 588510 586930 482910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 216110000 13214 1528 12499 25366;25367 20379;20380 20379 2 9606 Homo sapiens 0.052463405860066814 IIVDELK Unmodified 828.49567 0.49566969 2907 P63244;E9KL35;J3KPE3;H0Y8W2;D6RAC2;H0YAF8;D6REE5;H0YAM7;D6RF23;H0Y9P0 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 5.5 1.12 1 1 1 1 56.422 56.472 2 0.0072494 16844 20230619_1883_Aki_TMTPro18x_K_F4 132.29 48.484 1375600 999670 1024400 1224800 960910 1403900 1138700 1261500 1752400 1683000 1497400 2140400 2373300 2395800 696610 4044200 1125900 2749700 1268400 917540 1070500 1220500 1012800 1401900 1156900 1309700 1741600 1693500 1588300 2163800 2317700 2545600 781180 3954500 1084400 2619400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2776800000 13215 2907 12500 25368;25369;25370;25371 20381;20382;20383 20381 3 9606 Homo sapiens 0.07456168154283205 IIVDELKQEVISTSSK Unmodified 1787.988 0.98804492 2907 P63244;E9KL35;J3KPE3;H0Y8W2;D6RAC2;H0YAF8;D6REE5;H0YAM7;D6RF23;H0Y9P0 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 1 8 0 1 62.66 62.685 3 1.0982E-05 18928 20230619_1888_Aki_TMTPro18x_K_F8 106.52 96.991 177790 179160 223480 208800 239750 135430 181300 228680 142030 193370 182220 94091 92895 60896 264050 51587 78098 21968 164990 164160 223150 207690 244910 145070 185340 226110 148800 193960 180900 98964 105400 63551 254040 51065 76133 21385 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1666899999.9999998 13216 2907 12501 25372 20384 20384 1 9606 Homo sapiens 0.12557041463901442 IIVDTYGGWGAHGGGAFSGK Unmodified 1948.9432 0.94316041 1192 A0A140VJP5;P31153;B4DEX8;P31153-2;B4DN74;A8K455;Q00266 MAT2A;MAT1A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase;S-adenosylmethionine synthase isoform type-1 yes no 0 0 0 2 0 1 57.497 57.511 3 6.1846E-26 17606 20230619_1881_Aki_TMTPro18x_K_F2 197.28 178.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13217 1192 12502 25373 20385 20385 1 9606 Homo sapiens 0.0066465544121001585 IIVLGLLPR Unmodified 992.67464 0.67463711 3749 V9HW44;P68402;J3KNE3 HEL-S-303;PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta yes no 0 0 0 7.5 0.5 1 1 63.826 63.848 2 0.00035282 19450 20230619_1888_Aki_TMTPro18x_K_F8 138.85 138.85 1246900 1138500 1186000 1198100 1119400 1368500 1350200 1285400 1467300 995410 910700 707560 828790 686080 1158900 916950 854830 695080 1153300 1042600 1209200 1208000 1175300 1369100 1351300 1311300 1464500 1013700 956490 731650 864000 720660 1154500 906230 819720 663130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 754570000 13218 3749 12503 25374;25375 20386;20387 20387 2 9606 Homo sapiens 0.17800677513025676 IIWELIK Unmodified 913.56369 0.56368968 274 V9HW78;B2R5M8;A0A024R3Y6;O75874;Q6FIA4;Q6FI37;C9J4N6;C9JJE5;C9JLU6 HEL-216;IDH1 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 2.5 0.5 1 1 64.499 64.519 2 0.0075954 20338 20230619_1882_Aki_TMTPro18x_K_F3 123.96 38.109 211400 186720 202790 200360 174580 228020 207830 209950 210130 215060 252500 265810 214900 236810 279950 257920 285160 300140 195510 171040 206320 201680 184720 228040 207830 215900 215560 218600 255670 266580 223990 246130 283700 261300 272890 284570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97477000 13219 274 12504 25376;25377 20388;20389 20389 2 9606 Homo sapiens 0.10345037804938784 IIWQFIK Unmodified 946.56402 0.56402403 3600 Q53GL5;P48735;P48735-2;H0YL11 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 0 0 6 0 1 64.067 64.114 2 0.0057238 19966 20230619_1886_Aki_TMTPro18x_K_F6 145.87 103.89 602800 488040 567880 618980 675430 871110 735290 765380 938030 638530 615200 446750 569640 492570 736770 590890 620710 424800 557090 447910 581950 617490 696050 858800 743850 785380 930360 647080 643620 464550 590880 511680 738970 583520 593650 405950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 395500000 13220 3600 12505 25378 20390;20391 20391 2 9606 Homo sapiens 0.08860457524792764 IIYGGSVTGATCK Unmodified 1325.6649 0.66493664 3674 V9HWK1;P60174;P60174-3;B4DUI5;Q53HE2;P60174-4;Q2QD09 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 2 0.816 1 1 1 50.489 50.531 3 1.4826E-15 14671 20230619_1881_Aki_TMTPro18x_K_F2 199.43 161.84 1440100 1175000 1179300 1233000 1458700 1655000 1444300 1434400 1682200 925450 852390 784220 810770 673780 1216200 934780 896500 718700 1329600 1076500 1224300 1246400 1494000 1636600 1463800 1466700 1665100 959790 912340 799620 848130 712320 1210300 924100 859630 685570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5607500000 13221 3674 12506 25379;25380;25381 20392;20393 20392 2 9606 Homo sapiens 0.01513076654669021 IIYIAPMR Unmodified 975.55756 0.55755844 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9;O75643-2;Q5ZF01 SNRNP200;ASCC3L1 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 5 0 1 56.62 56.682 2 0.0016888 16531 20230619_1885_Aki_TMTPro18x_K_F5 114.54 90.983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13222 3312 12507 25382 20394 20394 1 9606 Homo sapiens 0.06880196301767683 IIYIVHDEVK Unmodified 1227.6863 0.68632401 1225 Q6IB71;A0A140VK43;P25788-2;P25788;G3V4X5 PSMA3 Proteasome subunit alpha type;Proteasome subunit alpha type-3 yes no 0 0 0 6.5 0.5 1 1 53.97 54.042 3 8.0237E-06 15341 20230619_1887_Aki_TMTPro18x_K_F7 156.12 116.85 418120 334910 384850 393970 402870 495370 437840 445430 1277500 427280 357040 382510 522240 398430 379640 505980 435720 437450 386320 307160 394100 394400 420300 491960 464330 457900 1214500 433680 416510 391010 521200 416320 392340 502540 416370 416210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 838020000 13223 1225 12508 25383;25384 20395;20396 20396 2 9606 Homo sapiens 0.08158829745707408 IKADPDGPEAQAEACSGER Unmodified 1999.8905 0.89053249 4617 Q9NX24;D6RC52;D6RCB9;J3QSY4 NHP2 H/ACA ribonucleoprotein complex subunit 2 yes no 0 0 1 1.8 0.748 2 2 1 40.731 40.783 3;4 2.1577E-14 10126 20230619_1881_Aki_TMTPro18x_K_F2 151.41 146.2 250320 207660 253530 271880 288680 302400 304920 283950 305880 299620 305680 273920 274670 239650 309480 266050 271520 220490 231510 190630 257920 269650 297290 303070 306510 291830 311580 301190 312190 278110 282950 249650 311740 264590 259810 210100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 511620000 13224 4617 12509 25385;25386;25387;25388;25389 20397;20398;20399;20400 20398 4 9606 Homo sapiens -0.06941715474545163 IKDPDASKPEDWDER Unmodified 1799.8326 0.83260691 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;B4DHR1;K7EJB9;B4E2Y9 CALR;HEL-S-99n Calreticulin yes no 0 0 2 4 1.22 1 2 2 2 1 44.639 44.709 3;4 1.2492E-13 11558 20230619_1883_Aki_TMTPro18x_K_F4 170.47 154.6 1725100 1401200 1658900 1796300 1749800 2213900 1976400 2022800 2211900 2297600 2351200 2675700 2524000 2236500 2409400 2532700 2492400 2748700 1594600 1286100 1693400 1786800 1818900 2201700 1987200 2086700 2246500 2318600 2415900 2683000 2565600 2336800 2457400 2552300 2385700 2607500 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 7122199999.999999 13225 1691 12510 25390;25391;25392;25393;25394;25395;25396;25397 20401;20402;20403 20402 3 9606 Homo sapiens -0.035316093376650315 IKEEEPGAPSR Unmodified 1211.6146 0.61461563 4400 Q96T92 INSM2 Insulinoma-associated protein 2 yes yes 0 0 1 3 0 1 36.365 36.42 3 0.085391 8142 20230619_1882_Aki_TMTPro18x_K_F3 42.809 17.15 35172 24699 36479 31284 28676 26520 30096 30533 42189 46891 58573 49007 47837 45567 43678 39634 52554 45523 32504 22680 36785 31012 30420 27292 30674 31357 42937 46573 58773 49539 48993 46790 44952 40279 50149 43201 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22233000 13226 4400 12511 25398 20404 20404 1 9606 Homo sapiens 0.017272903211733137 IKEEMEAFPEKF Unmodified 1496.7221 0.72211717 4039 Q5JS54;Q5JS54-2;F2Z3E0 PSMG4 Proteasome assembly chaperone 4 yes no 0 0 2 6 0 1 60.41 60.468 3 0.0087167 18311 20230619_1886_Aki_TMTPro18x_K_F6 65.704 38.675 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13227 4039 12512 25399 20405 20405 1 9606 Homo sapiens -0.006375008596251064 IKEEPVNVNIPEK Unmodified 1507.8246 0.8246084 4124 Q6PCB5-2;Q6PCB5 RSBN1L Round spermatid basic protein 1-like protein yes no 0 0 1 6 0 1 50.179 50.256 3 0.00098835 14040 20230619_1886_Aki_TMTPro18x_K_F6 88.974 19.26 29473 25647 30811 33064 28454 30772 31344 24794 30380 34855 38735 33984 35789 26996 37143 29969 31761 27189 27274 23536 31163 32744 29802 31161 31412 26046 31350 34656 39196 34299 36644 28247 37407 29943 30409 25871 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14506000 13228 4124 12513 25400 20406 20406 1 9606 Homo sapiens 0.09100908203504332 IKEGVEEAAK Unmodified 1072.5764 0.57643921 3189 M0QXU7;Q9UPE4;Q53G69;O43615 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 yes no 0 0 1 4 0 1 43.671 43.715 3 0.0035836 11145 20230619_1883_Aki_TMTPro18x_K_F4 85.522 61.432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13229 3189 12514 25401 20407 20407 1 9606 Homo sapiens 0.04305404406500202 IKETVDQVEELRR Unmodified 1613.8737 0.87368386 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 2 5.5 0.5 1 1 48.455 48.532 4 9.6098E-11 13300 20230619_1886_Aki_TMTPro18x_K_F6 179.33 155.95 95859 89097 95832 105300 99524 105500 111560 107280 102960 101540 117640 84084 83849 56675 140750 54100 59378 40967 88713 81673 97465 105030 103320 106730 111550 109340 105910 102350 118420 85247 89130 59290 137150 53982 57471 39118 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 611980000 13230 3881 12515 25402;25403 20408 20408 1 9606 Homo sapiens 0.09130196492469622 IKFPLPHR Unmodified 1006.6076 0.60762018 3788 Q02543;M0R3D6;M0R1A7;B4DM94;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q76N54 RPL18A 60S ribosomal protein L18a yes no 0 0 1 6.5 0.5 1 1 44.684 44.771 4 0.0065808 11607 20230619_1886_Aki_TMTPro18x_K_F6 101.28 83.959 696910 653450 662930 654690 710700 788970 784180 737960 711300 298930 260330 170880 218310 162610 462640 166800 189720 124000 644740 598100 676980 663300 736160 786680 783860 745800 709550 322400 286580 179480 235520 168410 449420 166170 183710 118470 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 431900000 13231 3788 12516 25404;25405 20409;20410;20411;20412;20413;20414 20411 6 9606 Homo sapiens 0.10458067021932038 IKGEELSEANVR Unmodified 1343.7045 0.70449327 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3 DCTN1;DKFZp686I0746 Dynactin subunit 1 yes no 0 0 1 3.5 0.5 1 1 42.184 42.237 3 0.015222 10542 20230619_1883_Aki_TMTPro18x_K_F4 66.215 51.243 271210 201770 244460 267420 289860 317410 299060 285120 352680 337770 354930 353480 363510 289930 324880 351120 395020 362020 250440 185330 251390 265250 297840 316410 302610 294930 356370 339070 364390 355950 368820 304510 335030 352410 377050 343850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 351020000 13232 1717 12517 25406;25407 20415 20415 1 9606 Homo sapiens 0.04638919929743679 IKGEHPGLSIGDVAK Unmodified 1519.8358 0.83584179 772 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;B3KQ05;B2RPK0 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 0 0 1 7.67 0.471 1 2 46.263 46.318 3;4 2.572E-05 12026 20230619_1888_Aki_TMTPro18x_K_F8 99.392 80.56 338940 270320 300880 321920 309200 323260 361530 357550 335370 372460 433430 359720 386040 319010 377680 381080 358350 348300 313070 247950 309060 320990 321720 327650 360800 363310 347060 375070 437550 364690 394910 333700 383150 380170 342990 331200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5928499999.999999 13233 772 12518 25408;25409;25410 20416;20417 20417 2 9606 Homo sapiens 0.09671730297645809 IKLEAERFENLR Unmodified 1516.8362 0.83617614 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 2 8 0 1 49.581 49.653 4 0.00024456 13374 20230619_1888_Aki_TMTPro18x_K_F8 105.99 95.045 183020 201900 169680 156360 186410 149920 176830 178170 142080 140110 137830 112460 130220 98261 238490 124420 110690 87969 169500 184370 173560 161890 191520 153110 177860 179050 146620 142710 141390 115050 138070 103230 232910 122970 106980 84023 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218750000 13234 3609 12519 25411 20418 20418 1 9606 Homo sapiens 0.09843150017536573 IKPHLMSQELPEDWDK Oxidation (M) 1980.9615 0.96151259 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;Q96C96;B3KTQ9 P4HB Protein disulfide-isomerase yes no 0 1 1 6.5 0.5 1 1 50.107 50.186 4 1.7353E-10 14003 20230619_1886_Aki_TMTPro18x_K_F6 156.17 134.02 149680 109800 128380 147100 141120 174600 142220 163870 200470 167270 154010 199520 187060 177800 155090 245170 224930 232280 138150 100870 132500 145810 145920 174140 145160 168180 199080 169920 161930 200340 188600 187550 162630 244280 214590 220730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 295290000 13235 537 12520 25412;25413 20419;20420 20419 311 2 9606 Homo sapiens 0.010270293009170928 IKPVFIEDANFGR Unmodified 1504.8038 0.80381338 1875 A0A994J595;P54289-4;P54289-5;P54289;Q9UIU0;P54289-3;P54289-2;A0A994J5M8;E7ERK3;O95026 CACNA2D1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 1 1.5 0.5 1 1 56.734 56.742 3 4.0095E-06 17147 20230619_1880_Aki_TMTPro18x_K_F1 134.24 102.82 258690 256740 283350 264020 194400 193480 287810 278410 266350 296750 315750 312740 320370 276770 359370 302980 301180 303340 239710 235000 284320 265440 211090 203170 284290 279150 274570 299210 321990 315530 328600 288040 361220 304290 288740 288100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114700000 13236 1875 12521 25414;25415 20421;20422 20421 2 9606 Homo sapiens 0.07160362614490623 IKPVLMMNK Oxidation (M) 1088.6086 0.60860773 3447 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 1 1 5.5 0.5 1 1 49.588 49.665 3 0.0035789 13606 20230619_1885_Aki_TMTPro18x_K_F5 89.886 56.657 129140 141910 103620 94445 421290 1210500 154430 126970 1201700 76435 52973 82700 82915 64399 79631 75120 90873 92491 119480 129470 113000 112750 413850 1112300 201930 202500 1115500 84153 109370 82964 84127 67657 81619 76301 86849 87658 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100560000 13237 3447 12522 25416;25417 20423 20423 2089 1 9606 Homo sapiens 0.06784777284315169 IKQEILPEER Unmodified 1253.698 0.69795133 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;A0A8I5KPQ8;A0A8I5KS07;A0A8I5KW29;A0A8I5KYL4;A0A8I5KNL1 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 1 5 0.816 1 1 1 46.16 46.227 3 0.0027491 12141 20230619_1885_Aki_TMTPro18x_K_F5 85.258 34.349 200250 167320 185480 188270 169280 203510 218220 189860 225870 248180 238080 175860 246910 173600 207830 240390 199620 154810 185080 153370 189460 188680 178550 204340 217390 196500 230280 245490 243630 181950 249560 182780 211740 235650 190760 148110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1675799999.9999998 13238 88 12523 25418;25419;25420 20424 20424 1 9606 Homo sapiens 0.08125026769039323 IKSEHPGLSIGDTAK Unmodified 1551.8257 0.82567103 4068;3509 Q5U071;D6R9A6;P26583 HMGB2 High mobility group protein B2 no no 0 0 1 7.5 0.5 1 1 43.24 43.285 4 2.6438E-10 10780 20230619_1888_Aki_TMTPro18x_K_F8 156.49 131.56 154370 154560 210890 179330 206640 161500 201410 190920 76852 151180 173490 89187 69498 47151 198310 29480 40019 23857 143370 141620 209180 179010 213810 165560 199780 191980 89410 152700 168620 92018 80001 49196 189720 30177 39708 22779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 356740000 13239 4068;3509 12524 25421;25422 20425 20425 1 9606 Homo sapiens 0.07183122572405409 IKVDNHLFNK Unmodified 1226.6772 0.6771563 3599;3755 P48426;P48426-2;A0A087WT35;P78356;P78356-2 PIP4K2A;PIP4K2B Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha;Phosphatidylinositol 5-phosphate 4-kinase type-2 beta no no 0 0 1 3 0 1 46.972 47.052 4 0.0076185 12841 20230619_1882_Aki_TMTPro18x_K_F3 76.165 42.087 94484 85919 96404 99261 99847 116600 110060 114260 120610 118020 127200 101740 93103 82608 143200 84945 82621 68974 87442 78748 97854 99402 103760 116530 110740 116950 122500 118570 128620 103390 98422 85939 141070 84652 79543 65731 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200780000 13240 3599;3755 12525 25423 20426 20426 1 9606 Homo sapiens 0.0728848118001224 IKYPENFFLLR Unmodified 1438.7973 0.79727144 3705;3704;685 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;B4DJ75;B7ZB67;H0Y3Y6;C9JP48;B4E163;C9J9S3;P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;E9PMD7;B3KXM2;P62136-3;A0A024RBP2;F8W0W8;P36873;P36873-2;Q9UPN1;F8VYE8;F8VR82;A0A087WYY5 HEL-S-80p;PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 1 4.5 0.5 1 1 61.327 61.353 3 4.0762E-06 18475 20230619_1885_Aki_TMTPro18x_K_F5 124.21 91.777 2750100 2635900 2695000 2695700 2879100 3589900 3439800 2870000 3109800 1194100 1195200 680050 537430 541830 2201600 490400 482640 269320 2545300 2412900 2746100 2730200 2992700 3545400 3422900 2938500 3103400 1284900 1287900 711030 648160 560480 2105200 487110 476930 258920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 682750000 13241 3705;3704;685 12526 25424;25425 20427 20427 1 9606 Homo sapiens 0.09542469453776903 ILAAALTECHR Unmodified 1253.655 0.65504065 162 A0A024R1U0;P46060 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 0 1 0 1 49.634 49.634 3 1.5067E-31 14186 20230619_1880_Aki_TMTPro18x_K_F1 287.65 213.66 27939 22381 27864 27407 24203 31864 30615 29638 35297 33762 30406 25968 30382 24505 23943 33967 28389 30804 25830 20534 28262 27328 25646 31819 30642 30537 35502 33670 31387 26685 30699 25837 24764 33772 27136 29282 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 509280000 13242 162 12527 25426 20428 20428 1 9606 Homo sapiens 0.03835933439950168 ILAALEAVGK Unmodified 983.60153 0.60153174 1685 Q15147-4;A0A8J8Z831;A0A7P0MRI8;A0A8I5KQI1;A0A8I5KS50;A0A8I5KXD7;A0A8I5KRP3;A0A8I5QL35;A0A8I5KRK2;A0A8I5KR92;A0A8I5KX82;A0A8I5KPD4;A0A8I5QJ53;Q15147-5;Q15147;A0A8I5KXW3;A0A8I5KYY7;A0A8I5QJE7;A0A8I5KQ87;A0A8I5KWR8;A0A8I5KQZ0;B1AJW3;A0A8I5KQF5;A0A8I5KVM8 PLCB4 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 yes no 0 0 0 2 0 1 63.796 63.804 3 0.0018985 20308 20230619_1881_Aki_TMTPro18x_K_F2 95.502 64.938 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13243 1685 12528 25427 20429 20429 1 9606 Homo sapiens 0.10907503999760593 ILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTR Unmodified 3255.7324 0.73238636 2922 E9PJH7;Q9H936;K4DIA8;E9PS95;A0A0D9SEI9;A0A0D9SFE1;A0A024RCA6;K4DIB8 SLC25A22 Mitochondrial glutamate carrier 1 yes no 0 0 1 3 0 1 51.666 51.732 4 2.0489000000000002E-41 14941 20230619_1882_Aki_TMTPro18x_K_F3 217.37 200.22 15143 13191 12873 15284 15756 17023 14499 17438 19429 12605 13033 10296 13452 9980.3 13569 13060 13835 11297 13990 12092 13322 15287 16116 17092 14847 17647 19241 12939 13674 10565 13715 10475 13807 12979 13217 10758 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145260000 13244 2922 12529 25428 20430 20430 1 9606 Homo sapiens 0.1947494590763199 ILACDDLDEAAR Unmodified 1360.6293 0.62927941 1360 Q9P2R7;Q9P2R7-2;A0A2R8Y6Y7;Q6N0B1;E5KS55;E5KS60;A0A2R8YDQ9;B4DRV2;B7ZAF6;Q7Z503;B4DY87;A0A0S2Z511;B7Z9S6;Q9Y4T0;A0A0U1RQL1 SUCLA2;DKFZp686D0880;DKFZp564P2062 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 1.5 0.5 1 1 51.551 51.574 2 4.3909E-51 14973 20230619_1880_Aki_TMTPro18x_K_F1 328.65 309.56 141510 121010 128890 146070 133880 153500 178770 166780 181510 173500 161030 134640 195480 148310 134580 205390 174730 163660 130790 110980 132210 145580 139900 154960 177660 169640 183980 173830 167460 139110 195440 155620 140520 202930 166710 155930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147190000 13245 1360 12530 25429;25430 20431;20432 20431 2 9606 Homo sapiens -0.036610055929941154 ILACNDPGRR Unmodified 1170.5928 0.59277475 1027 A0A0D9SFR5;H3BQ06;H3BV07;A0A2R8Y518;Q9ULP9-2;Q9ULP9 TBC1D24 TBC1 domain family member 24 yes no 0 0 1 1 0 1 34.818 34.818 3 7.8317E-05 7905 20230619_1880_Aki_TMTPro18x_K_F1 104.42 68.042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13246 1027 12531 25431 20433 20433 1 9606 Homo sapiens 0.014302070916073717 ILADATAK Unmodified 801.45962 0.45961853 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 7 0 1 48.764 48.851 3 0.0022201 13080 20230619_1887_Aki_TMTPro18x_K_F7 106.38 64.402 92258 69300 99871 96732 101560 131090 98173 94723 129160 78716 80483 79372 87872 67789 83732 74792 91666 92542 85323 63686 100840 95840 105450 129030 100130 98867 127750 80571 85187 80159 89234 70748 85601 76068 87635 87705 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64290000 13247 1292 12532 25432 20434 20434 1 9606 Homo sapiens 0.050947109774256205 ILAEGGGAK Unmodified 814.45487 0.45486751 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 6 0.816 1 1 1 44.688 44.772 2 0.00041697 11550 20230619_1886_Aki_TMTPro18x_K_F6 152.63 73.514 237320 129190 296570 308740 398650 423180 349800 416440 365920 282320 417660 452580 380150 349710 398460 186470 449410 423730 219440 119860 297940 298190 404350 418680 356260 422100 373510 297670 424770 447840 390190 355630 406440 204040 429320 400040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 340430000 13248 1417 12533 25433;25434;25435 20435 20435 1 9606 Homo sapiens 0.040218268346734476 ILAFPCNQFGK Unmodified 1293.654 0.65397802 3155 K7ERP4;K7EJ20;P36969-2;P36969;A0A0A0MTT1;K7EKX7;R4GNE4;K7ENB4;Q6PI42 GPX4 Glutathione peroxidase;Phospholipid hydroperoxide glutathione peroxidase, mitochondrial yes no 0 0 0 4.5 0.5 1 1 61.507 61.555 3 2.8209E-07 18985 20230619_1883_Aki_TMTPro18x_K_F4 140.75 121.43 121560 79418 96920 105310 142200 162990 151360 157650 174830 163190 152590 141510 170720 143150 167160 170920 174090 175150 112070 72988 101270 104960 144490 160260 152740 161440 175940 164010 158360 144760 173490 149130 170440 171540 166510 166310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193390000 13249 3155 12534 25436;25437 20436;20437 20436 2 9606 Homo sapiens 0.018897190710276845 ILAGLGFDPEMQNRPTQK Unmodified 2014.0306 0.030595207 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7;B4DNU2 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 1 2 0 1 59.492 59.505 3 6.3991E-14 18416 20230619_1881_Aki_TMTPro18x_K_F2 161.75 140.52 108540 88462 96369 100430 68358 104470 87187 90355 103580 137320 110890 118460 153280 122080 101460 164960 145610 145150 100270 81098 98531 100510 74015 104970 87397 94529 105110 135670 115280 121240 152620 128110 106860 163770 138890 138080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94411000 13250 1296 12535 25438 20438 20438 1 9606 Homo sapiens 0.06414113320465731 ILAIGLINEALDEGDAQK Unmodified 1882.0048 0.004757612 707 P46940;A4QPB0;A0A024RC65;A0A0J9YXZ5;Q6P1N4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 4 0 1 65.818 65.829 3 0.0057013 20727 20230619_1883_Aki_TMTPro18x_K_F4 66.022 32.661 7530.5 6946.8 7191.2 5920.8 8588.5 5731.2 8044.4 9578.2 7574.9 8095.6 7922.2 7765 7278.9 6970.3 9882 9107.2 7889.6 8180.6 6966.2 6351 7341.7 6076.6 8763.8 5913.8 8134.3 9471.3 7763.2 8242.9 8089.8 7875.6 7576.4 7324.6 9889.1 9068.8 7570 7778.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6782200 13251 707 12536 25439 20439 20439 1 9606 Homo sapiens 0.09903542349820782 ILALDCGLK Unmodified 1001.558 0.55795237 2980 F8VPD4;P27708;Q53SY7;G1UI39 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 4.5 3.5 1 1 59.905 59.923 2 0.0021335 17719 20230619_1888_Aki_TMTPro18x_K_F8 123.72 71.725 120160 92549 111550 124240 124340 112870 116870 120480 136450 147160 150580 128380 152570 134610 136670 164150 144940 152240 111000 85006 114260 122700 127790 115230 118930 123270 138560 146720 153750 131510 154910 140200 139870 163740 138650 144700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 444260000 13252 2980 12537 25440;25441 20440;20441 20441 2 9606 Homo sapiens 0.05723571230964808 ILAPPGGR Unmodified 779.46537 0.46537261 4008 Q53SW3;Q9BPU6 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 1.5 0.5 1 1 42.794 42.835 2 0.02521 11139 20230619_1881_Aki_TMTPro18x_K_F2 84.359 25.807 269240 266660 274180 287530 229940 242300 222420 219630 249140 296550 335220 323200 336610 268490 267340 369500 407550 346720 249330 244180 277440 288180 242070 248140 225800 228180 255920 296310 339760 325200 340210 284120 281350 368090 388170 329780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142740000 13253 4008 12538 25442;25443 20442 20442 1 9606 Homo sapiens 0.06681854279759136 ILAQVVGDVDTSLPR Unmodified 1581.8726 0.87262123 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 7 0 1 63.822 63.852 3 5.2126E-20 19577 20230619_1887_Aki_TMTPro18x_K_F7 190.86 166.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13254 2436 12539 25444 20443 20443 1 9606 Homo sapiens 0.10495982123575232 ILASPVELALVVMK Unmodified 1481.8891 0.88912291 2154 A8KAK1;Q9NYU2-2;Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 4 0 1 66.908 66.921 3 0.013209 21189 20230619_1883_Aki_TMTPro18x_K_F4 63.091 43.479 5012.3 2559.6 3495.9 4856 2506.7 4483.5 3839.8 4769.8 5931.4 3926.6 3372.5 4483.1 4354.7 3438.9 4718.4 4651.2 6142.6 4208.4 4612.2 2366.3 3672.6 4705.1 2739.7 4559.6 3859.4 4829.8 5816.5 4033.2 3632.6 4488.2 4432.7 3645.8 4868.6 4630.3 5850 4009 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1644500 13255 2154 12540 25445 20444 20444 1 9606 Homo sapiens 0.1674539175589871 ILATGGASHNR Unmodified 1095.5785 0.57850489 1498 B3KM56;A0A3B3IRM4;O75191-2;O75191 XYLB Xylulose kinase yes no 0 0 0 1.5 0.5 1 1 31.726 31.789 3 4.3877E-05 6424 20230619_1881_Aki_TMTPro18x_K_F2 133.12 91.676 15169 8042.3 14908 16229 21939 15886 17891 19879 18553 14015 22091 28687 21867 20294 21081 12957 25077 23847 13994 7440.8 15268 15702 22055 16188 18303 19879 18984 14918 22536 28138 22299 20818 21623 13780 23947 22539 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9418200 13256 1498 12541 25446;25447 20445;20446 20446 2 9606 Homo sapiens 0.034538779349986726 ILATPPQEDAPSVDIANIR Unmodified 2019.0637 0.063669474 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8;B4DVU1;E9PFF2 HEL107;TKT Transketolase yes no 0 0 0 5 0.816 1 1 1 60.713 60.75 3 3.9706000000000005E-31 18628 20230619_1883_Aki_TMTPro18x_K_F4 224.64 213.52 134060 87728 122980 174030 93005 132590 91176 115710 219270 147550 152820 189130 186920 136700 139430 210290 250130 240210 123720 81055 125690 167870 99490 136640 96057 120320 213270 148840 161540 188310 187460 146750 149110 211550 238180 227870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1647899999.9999998 13257 3523 12542 25448;25449;25450 20447;20448;20449 20447 3 9606 Homo sapiens 0.09490018644191878 ILAYTEGLHGK Unmodified 1200.6503 0.65027285 1543 P50851;P50851-2;A0A494BZW2;A0A494C1L5;E9PEM5;Q59HC1;A0A8V8TM79;B3KVI6;Q68D03;A0A8V8TKR0;A0A8V8TLZ6 LRBA;DKFZp686K03100 Lipopolysaccharide-responsive and beige-like anchor protein yes no 0 0 0 1 0 1 51.429 51.429 3 2.7834E-09 14969 20230619_1880_Aki_TMTPro18x_K_F1 182.64 108.17 33449 31166 37757 36616 40086 33041 34842 40289 42034 43478 46350 44670 46838 36943 44987 52758 48870 47468 30989 28567 38004 36507 41222 33888 35693 40732 42608 43787 47363 45060 47681 39203 46036 52442 46711 45147 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24739000 13258 1543 12543 25451 20450 20450 1 9606 Homo sapiens 0.057973725688498234 ILCDVPCSGDGTMR Unmodified 1579.6793 0.67928285 3813 Q08J23-2;Q08J23;Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 0 0 0 4 0 1 51.722 51.75 2 0.00062572 14784 20230619_1883_Aki_TMTPro18x_K_F4 103.34 96.652 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13259 3813 12544 25452 20451 20451 1 9606 Homo sapiens -0.08736962250986835 ILCFYGPPGVGK Unmodified 1306.6744 0.67437911 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0;K7ER27 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 5 0 1 62.073 62.121 3 0.002238 18862 20230619_1885_Aki_TMTPro18x_K_F5 74.944 59.405 247120 178370 199180 232600 205170 229930 258890 228480 259130 249130 243250 203980 283310 226710 200520 296070 263880 271130 227970 163820 206650 230370 214160 232660 257830 234170 263380 249380 251740 210180 283900 236870 209390 294710 251920 257760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188130000 13260 2417 12545 25453 20452 20452 1 9606 Homo sapiens 0.03330889730841591 ILCQEEQDAYRR Unmodified 1579.7413 0.74128948 3591 X6RJS7;P46736-2;P46736-3;P46736;D3DWY6;P46736-4 BRCC3 Lys-63-specific deubiquitinase BRCC36 yes no 0 0 1 3.5 0.5 1 1 41.761 41.814 3 0.000202 10328 20230619_1883_Aki_TMTPro18x_K_F4 101.33 79.954 61750 45517 61955 63550 66292 71131 70940 63239 81853 73040 80631 77529 70764 68995 74475 84053 82003 78438 57065 41833 62994 62780 68630 71166 71583 65441 82683 73460 82344 78242 72782 72194 76136 83889 78362 74574 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103230000 13261 3591 12546 25454;25455 20453 20453 1 9606 Homo sapiens -0.025391515160208655 ILDAVVAQEPLHR Unmodified 1459.8147 0.81471242 2436 B3KX19;Q15029-2;Q15029;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;K7EP67;K7EJ74 EFTUD2;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 6.5 0.5 1 1 55.909 55.967 3 5.6991E-11 16173 20230619_1887_Aki_TMTPro18x_K_F7 151.74 119.13 39730 33930 34767 37232 30845 38291 35685 40940 47007 38044 36218 38418 40370 38735 40525 47475 43706 47384 36709 31090 35689 37361 32545 38700 36065 41551 46799 38633 37871 39012 41119 40390 41422 47542 41812 44993 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 401810000 13262 2436 12547 25456;25457 20454;20455 20455 2 9606 Homo sapiens 0.10319764988798852 ILDCQNHTCMK Oxidation (M) 1434.6054 0.60538962 2201 B1Q2B0;Q6ZNB6;Q6ZNB6-2 URCC5;NFXL1 NF-X1-type zinc finger protein NFXL1 yes no 0 1 0 6.5 0.5 1 1 38.653 38.726 3 0.017187 9012 20230619_1886_Aki_TMTPro18x_K_F6 59.198 50.469 20595 17931 21079 24940 33504 32025 29553 26247 36533 26198 28160 30775 31884 27850 27873 31651 38919 28717 19055 16468 21580 24687 33679 31720 30218 27222 36469 26649 29466 30935 32256 29012 29039 31575 37060 27344 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22260000 13263 2201 12548 25458;25459 20456 20456 1372 1 9606 Homo sapiens -0.09452885622681606 ILDDDTIITTLENLK Unmodified 1715.9193 0.91929665 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5.5 0.5 1 1 66.546 66.589 3 8.244899999999999E-19 20972 20230619_1886_Aki_TMTPro18x_K_F6 202.32 178.13 27200 17861 18149 25164 18904 23523 19751 24688 32765 32285 33279 43435 44224 35018 25156 51674 46683 52712 25051 16425 19242 24777 19672 23926 20279 25340 32677 32559 34636 43300 43889 37285 27253 51628 44499 50033 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69132000 13264 3881 12549 25460;25461 20457;20458 20458 2 9606 Homo sapiens 0.0899737716420077 ILDDTEDTVVSQR Unmodified 1489.726 0.72601657 1470 A0A384NL74;P42696;A2A2V2;P42696-2;Q5TCT4 RBM34 RNA-binding protein 34 yes no 0 0 0 1.5 0.5 1 1 52.051 52.07 2 9.994999999999998E-21 15190 20230619_1880_Aki_TMTPro18x_K_F1 221.59 189.17 108440 86848 99660 111190 108530 124380 129050 118140 134670 133420 123950 119560 145310 108100 105270 148760 141590 137200 100190 79718 102190 110450 112610 124610 129060 121550 136510 133600 128550 121670 145650 114110 110000 148060 135090 130450 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 164360000 13265 1470 12550 25462;25463 20459;20460;20461 20459 3 9606 Homo sapiens 0.0007426016782119405 ILDDWGETCK Unmodified 1235.5492 0.54923818 2116 A8K878;P55145 MANF Mesencephalic astrocyte-derived neurotrophic factor yes no 0 0 0 4 0.816 1 1 1 58.401 58.431 2 0.00046802 17253 20230619_1885_Aki_TMTPro18x_K_F5 138.66 102.7 23442 21407 22476 20413 21580 26509 27261 24593 31181 29121 23191 30386 33373 25780 25381 38111 36201 36876 21684 19588 22893 20797 22664 26306 27267 25378 31244 29233 24662 30623 33359 27407 26617 37987 34537 35036 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168010000 13266 2116 12551 25464;25465;25466 20462 20462 1 9606 Homo sapiens -0.05911447196172048 ILDEIEEHNIK Unmodified 1351.6983 0.69834526 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;C9J2Q4;H7C2Y0 SEPT2 Septin-2 yes no 0 0 0 3.5 0.5 1 1 56.717 56.738 3 2.586E-12 17133 20230619_1882_Aki_TMTPro18x_K_F3 196.16 157.37 765440 674240 737650 783900 654720 615530 821670 692490 603740 1004300 988320 883480 937940 738130 930160 1013000 948300 942920 707910 618070 750570 780740 689590 637600 812380 711050 644260 993580 993280 897660 957860 781050 947470 1009400 907120 896350 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3450899999.9999995 13267 3910 12552 25467;25468 20463;20464;20465 20464 3 9606 Homo sapiens 0.03656401698231093 ILDELEK Unmodified 858.46985 0.46984887 1624 Q8TB36;Q8TB36-2;A0A6Q8PGS2;A0A6Q8PGL3;B4DIH2;A0A6Q8PH79;A0A6Q8PFG4;A0A7I2RYU0;A0A6Q8PEZ4;A0A6Q8PHN7;A0A6Q8PH88;A0A6Q8PEX8;A0A6Q8PH97;A0A6Q8PGU0;A0A6Q8PHC1;A0A6Q8PGQ9 GDAP1 Ganglioside-induced differentiation-associated protein 1 yes no 0 0 0 3.5 0.5 1 1 58.371 58.387 2 0.0142 17769 20230619_1882_Aki_TMTPro18x_K_F3 117.02 47.675 159890 135050 146540 167090 104180 110370 143510 150950 167560 191220 206270 237290 219170 198300 187040 258910 277810 316480 147780 123900 149440 165410 112640 116890 143280 152570 170950 192390 210560 237460 221930 209060 196180 262160 265200 299840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 380980000 13268 1624 12553 25469;25470 20466 20466 1 9606 Homo sapiens 0.03495273912005814 ILDETQEAVEYQR Unmodified 1592.7682 0.76821574 3111 I3L4A1;Q96FZ7;I3L4G8;I3L3E4 CHMP6 Charged multivesicular body protein 6 yes no 0 0 0 3 0.816 1 1 1 54.163 54.193 2 3.2044E-07 16242 20230619_1881_Aki_TMTPro18x_K_F2 157.03 13.993 21315 15511 20538 24402 26123 27360 24160 23952 34106 45938 60614 76060 45322 47486 60779 49685 58937 69029 19690 14277 21033 23932 26648 27363 24798 25308 35248 46127 60398 74787 47521 50002 61374 51014 56478 65322 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2437000000 13269 3111 12554 25471;25472;25473 20467 20467 1 9606 Homo sapiens -0.004457644238073044 ILDGMFAICGVSDSK Unmodified 1611.7637 0.7636644 1641 P12081;P12081-4;E7ETE2;A0A6Q8PHA5;A0A6Q8PFF2;Q52NV4;P12081-2;P12081-3;A0A6Q8PF47;A0A6Q8PHE3;B4DDD8;B3KWE1;B4E1C5;A0A6Q8PF07;B4DEA2;A0A6Q8PFG9;A0A6Q8PFN6 HARS;HRS Histidine--tRNA ligase, cytoplasmic yes no 0 0 0 4.5 3.5 1 1 64.061 64.072 3 0.0083156 19585 20230619_1888_Aki_TMTPro18x_K_F8 50.305 39.647 76380 82040 64683 59014 48406 54663 64289 90379 79638 64721 57679 68739 83041 60812 63542 75581 82753 91334 70675 74887 66398 61606 52056 56509 64450 89081 79375 66869 61387 69334 82985 63848 66081 76549 79052 86551 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84268000 13270 1641 12555 25474;25475 20468;20469 20469 2 9606 Homo sapiens -0.017746881625953392 ILDIANMLGLSNTVMR Unmodified 1759.9325 0.93246107 1316 A0A1W2PRP7;A0A1W2PQ77;I3NI02;A0A1W2PR23;A0A1W2PPG5;O14653-2;O14653;A0A1W2PPP5;A0A1W2PR02;A0A1W2PPW8;I3L4Z6;A0A1W2PPG1;A0A1W2PRC2;A0A1W2PQM3;A0A1W2PS81;E7EQ34;A0A1W2PQP2;B4E141;A0A1W2PS12;A0A1W2PRL0;A0A1W2PNV3;A0A1W2PQE0;A0A1W2PQ38;A0A1W2PQS3;A0A1W2PQ12 GOSR2 Golgi SNAP receptor complex member 2 yes no 0 0 0 6 0 1 66.929 66.973 3 0.0078844 21146 20230619_1886_Aki_TMTPro18x_K_F6 65.716 44.085 5235.8 8354 12345 3614.7 13444 7456.1 9323.1 14617 12498 6273.3 4827 4917.8 5966.2 4264.5 10927 5150.8 7630 6034.5 4924.5 7600.6 11901 4134.1 13694 7443.5 9754.5 14183 12238 6744.3 5375.7 5036.6 6284.9 4474.6 10809 5229.5 7321.2 5728.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8082100 13271 1316 12556 25476 20470 20470 1 9606 Homo sapiens 0.08289213470902723 ILDILGETCK Unmodified 1160.6111 0.61111015 2020;3876 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;Q14151;A0PJ47 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 0 7.5 0.5 1 1 63.143 63.171 3 0.00030316 19289 20230619_1887_Aki_TMTPro18x_K_F7 98.943 80.631 1136500 888270 1001600 1089500 916160 982000 1062200 1121300 1200300 1142100 1269700 1147200 1257400 1023900 1147500 1269600 1380400 1481900 1049500 815060 1027800 1082600 962510 1004500 1067300 1136500 1217400 1153100 1298100 1161000 1278400 1074000 1182300 1283300 1319200 1404900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 592890000 13272 2020;3876 12557 25477;25478 20471;20472 20471 2 9606 Homo sapiens 0.03722904222968282 ILDIVPPTFSALCPANPTCIYK Unmodified 2489.2698 0.2698392 133 A0A024R179;Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes no 0 0 0 4.5 0.5 1 1 65.549 65.577 3 3.622E-08 20630 20230619_1883_Aki_TMTPro18x_K_F4 100.92 87.492 12408 8992.8 11592 11528 11268 10689 13137 10838 11675 16132 15450 12996 14346 12983 8960.4 12909 18677 17007 11458 8257.9 11837 11425 11762 10882 13094 11210 12146 15918 15601 13333 14434 13398 9762.9 13191 17764 16116 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33212000 13273 133 12558 25479;25480 20473 20473 1 9606 Homo sapiens 0.08477507436828091 ILDNTSEPQPGEAR Unmodified 1525.7372 0.73724996 337 A0A024R5F4;P50416;B2RAQ8;P50416-2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 0 2 0 1 43.822 43.905 2 9.153399999999999E-22 11633 20230619_1881_Aki_TMTPro18x_K_F2 230.59 191.57 37947 30121 36540 30976 62254 67154 69199 56093 81725 40456 38491 41926 40768 31093 39574 49542 44445 51880 35071 27592 37614 31705 62810 64908 69640 57639 80698 41859 41658 42152 41486 33428 40590 49580 42529 49224 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70039000 13274 337 12559 25481 20474 20474 1 9606 Homo sapiens -0.004589177380239562 ILDQGEDFPASEMTR Unmodified 1707.7774 0.77740021 3526 V9HW71;P30040;F8VY02 HEL-S-107;ERP29 Endoplasmic reticulum resident protein 29 yes no 0 0 0 2.67 0.471 1 2 57.212 57.245 2;3 1.2196E-32 17228 20230619_1882_Aki_TMTPro18x_K_F3 246.3 177.57 77516 61826 73712 78577 62797 86589 87309 76258 89055 104110 94216 97443 104810 88243 92707 112880 110740 108230 71636 56747 75093 78073 66875 86672 86653 79394 90918 103510 96915 98897 106070 92640 95589 112720 105770 102860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106230000 13275 3526 12560 25482;25483;25484 20475;20476;20477 20476 3 9606 Homo sapiens -0.04817739129794063 ILDRENR Unmodified 914.49338 0.49337828 4657 Q9UBU9;E9PIN3;Q59E96;Q9UBU9-2;B4E227 NXF1 Nuclear RNA export factor 1 yes no 0 0 1 4.5 0.5 1 1 32.252 32.322 3 0.024186 6441 20230619_1883_Aki_TMTPro18x_K_F4 73.637 14.656 36158 29614 43468 37873 54505 48171 53464 52360 59822 42443 54825 50625 49756 41863 48149 33536 60825 50381 33491 27180 43672 37726 55597 48049 54156 52927 60312 43695 56237 50720 50874 43057 49599 34831 58002 47712 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10772000 13276 4657 12561 25485;25486 20478 20478 1 9606 Homo sapiens 0.03271132469183158 ILDSAEFIK Unmodified 1034.5648 0.56481189 2144 X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9;B4DM07 GTF2I General transcription factor II-I yes no 0 0 0 6.5 0.5 1 1 61.138 61.185 2 0.00040298 18639 20230619_1886_Aki_TMTPro18x_K_F6 137.06 17.2 305360 261420 304790 304360 255420 336350 320030 314700 350010 337480 369800 338580 362000 319070 356450 346870 380190 422790 282430 239670 308990 304350 271370 337100 319980 323620 355570 339940 377980 343130 369510 331350 363830 352410 363830 400610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 465520000 13277 2144 12562 25487;25488 20479 20479 1 9606 Homo sapiens 0.048912073831616 ILDSVGIEADDDR Unmodified 1416.6733 0.67325272 712 P05387;A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 yes no 0 0 0 1 0 1 56.681 56.681 3 0.00011143 17145 20230619_1880_Aki_TMTPro18x_K_F1 98.942 72.401 17615 16848 25207 32073 19471 26669 20037 27819 28558 23102 18039 27901 39585 29875 26425 34099 27589 35850 16363 15533 24931 31034 20731 27365 20463 28213 28213 23758 20005 28162 39069 30993 27209 34274 26442 34002 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94338000 13278 712 12563 25489 20480 20480 1 9606 Homo sapiens -0.018416978949971963 ILDSVGIEADDDRLNK Unmodified 1771.8952 0.89520716 712 P05387;A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 yes no 0 0 1 4 0.816 2 2 2 56.165 56.2 3;4 3.8891999999999994E-21 16843 20230619_1882_Aki_TMTPro18x_K_F3 218.45 177.35 752010 598850 659970 751150 640780 798130 739790 784230 878400 972950 856340 895870 903370 1280400 327280 1741000 313020 1154500 694540 549580 678440 746610 670890 802970 744660 806980 886940 971330 880990 927710 896470 1329200 350600 1705000 305450 1099700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21835000000 13279 712 12564 25490;25491;25492;25493;25494;25495 20481;20482 20481 2 9606 Homo sapiens 0.04013536730508349 ILDTALSK Unmodified 859.50148 0.50148335 1501 A0A8I5KXV4;F5H345;A0A3B3IRR1;A0A3F2YNY7;P08397-4;P08397-3;P08397-2;P08397;A0A3B3IU56;F5GY90;A0A1W2PNU5;A0A3B3IU34;F5H0P4;F5H226 HMBS Porphobilinogen deaminase yes no 0 0 0 8 0 1 56.037 56.099 3 0.0080915 16209 20230619_1888_Aki_TMTPro18x_K_F8 81.296 20.86 37418 32664 35822 38012 36586 39144 41472 45070 54591 44048 46279 48403 46865 39623 41579 56646 53333 48913 34602 29944 36547 37980 38086 39641 41940 45595 54507 44712 47907 48665 47579 42045 43105 56172 50884 46556 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36839000 13280 1501 12565 25496 20483 20483 1 9606 Homo sapiens 0.06611266665959192 ILDVASLEVLNEVNR Unmodified 1682.9203 0.9202997 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 6 0 1 64.634 64.678 3 0.092785 20225 20230619_1886_Aki_TMTPro18x_K_F6 35.091 22.324 13682 11003 13834 16185 15490 18766 16553 16015 19056 15106 18683 20537 17244 14658 16666 19508 20684 23243 12651 10116 14083 15942 16002 18707 16704 16533 19238 15486 19137 20405 17622 15572 17195 19724 19769 22027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97504000 13281 2863 12566 25497 20484 20484 1 9606 Homo sapiens 0.1061563632376874 ILDVIGLPGEEDWPR Unmodified 1707.8832 0.88318591 3773 Q00534 CDK6 Cyclin-dependent kinase 6 yes yes 0 0 0 4.5 0.5 1 1 65.108 65.135 3 1.7503E-10 20230 20230619_1885_Aki_TMTPro18x_K_F5 117.08 99.799 16492 13279 12459 12770 14499 13847 13773 14614 15536 13023 14118 16009 16418 15837 15926 19009 18439 21308 15217 12157 13019 12965 14875 13953 13987 14833 15669 13342 14669 16118 16677 16503 16360 19169 17638 20203 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204590000 13282 3773 12567 25498;25499 20485;20486 20486 2 9606 Homo sapiens 0.057559647779498846 ILDVLEEIPK Unmodified 1167.6751 0.67509062 428 A0A024R745;H7BYD0;Q16718;F8WAS3;C9IZN5;A0A7I2V2W4;A0A087X1G1;A0A7I2V3L8;Q16718-2 NDUFA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes no 0 0 0 5 0.816 1 1 1 64.989 65.022 2 0.00032529 20326 20230619_1886_Aki_TMTPro18x_K_F6 131.44 90.452 76583 64897 75126 70330 84016 105320 92961 101040 100900 83609 87977 81918 104880 86268 91203 111820 100980 108740 70818 59461 76568 71081 86903 103710 93467 102980 101800 85420 91578 83500 105850 90214 93638 111720 96581 103280 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 95793000 13283 428 12568 25500;25501;25502 20487;20488;20489 20488 3 9606 Homo sapiens 0.09796007651561922 ILDVMYSR Unmodified 995.511 0.51100218 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 3.67 3.09 1 1 1 58.284 58.304 2 0.0021673 17794 20230619_1880_Aki_TMTPro18x_K_F1 131.03 99.742 333920 286800 293350 313670 264810 345100 353690 333700 376990 348400 319820 305150 349270 288880 342640 368700 346080 351750 308560 262780 301160 315090 280190 346270 352120 342120 380460 350070 332100 311310 355190 302830 348870 368210 331130 334260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 627960000 13284 3758 12569 25503;25504;25505 20490;20491;20492 20490 3 9606 Homo sapiens 0.013067116798310963 ILDWHVANTDK Unmodified 1310.6619 0.66190017 1232 A0A140VK56;P37837-2;P37837;F2Z393 TALDO1 Transaldolase yes no 0 0 0 7 0 1 53.368 53.435 3 7.4763E-05 15086 20230619_1887_Aki_TMTPro18x_K_F7 123.64 99.385 108990 84425 97627 104760 89693 129730 110240 111920 158540 127070 124730 144290 154780 134130 112800 164350 158600 205860 100660 77479 100080 104440 94705 128790 111430 115960 157360 128240 130960 145340 155110 140350 118270 166810 151640 194910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198490000 13285 1232 12570 25506 20493 20493 1 9606 Homo sapiens 0.01899569592160333 ILDWHVANTDKK Unmodified 1438.7569 0.75686319 1232 A0A140VK56;P37837-2;P37837;F2Z393 TALDO1 Transaldolase yes no 0 0 1 1 0 1 50.017 50.017 3 0.014855 14387 20230619_1880_Aki_TMTPro18x_K_F1 65.043 42.465 35326 28696 37375 41339 33381 39441 40078 38914 44156 42164 49687 49643 44731 41703 50239 49037 49868 52544 32679 26372 37764 40670 35183 39998 40161 39897 44951 42666 50517 49798 46094 43650 50964 49363 47735 49859 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39363000 13286 1232 12571 25507 20494 20494 1 9606 Homo sapiens 0.055035030633462156 ILEAHQNVAQMSLIEAK Oxidation (M) 1909.9931 0.99314707 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8;H0YJB6 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 1 0 7.5 0.5 1 1 51.053 51.131 3 5.68E-07 14112 20230619_1887_Aki_TMTPro18x_K_F7 117.18 105.91 151440 118210 127200 155720 167460 176050 157390 163370 196130 169130 158390 142310 175620 131810 143950 175370 148740 157050 139810 108540 132000 154380 170540 176190 160440 167900 196130 169870 164900 145420 177080 138700 147380 174420 142320 149330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 211980000 13287 385 12572 25508;25509 20495;20496 20496 239 2 9606 Homo sapiens 0.07455022054864457 ILEDDLK Unmodified 844.4542 0.45419881 3692 P61221;D6R9I9;D6RGF4;H0Y990 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 0 0 2 0.816 1 1 1 53.509 53.536 2 0.012714 15709 20230619_1882_Aki_TMTPro18x_K_F3 119.21 26.287 824240 645630 679080 799300 886920 922360 898190 866260 990440 970990 1029400 1103300 1174500 922060 933010 1238200 1187700 1102400 760840 592470 705750 796050 905040 922240 907640 891750 1005700 979740 1061000 1108100 1182300 973830 968700 1230700 1133300 1048800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 623980000 13288 3692 12573 25510;25511;25512 20497;20498 20497 2 9606 Homo sapiens 0.025749873949393987 ILEDNSIPQVK Unmodified 1254.682 0.68196691 1402 A0A384MDR8;P11177-3;P11177-2;P11177 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes no 0 0 0 5.5 0.5 1 1 55.46 55.53 3 0.00027829 16252 20230619_1886_Aki_TMTPro18x_K_F6 104.52 63.934 152690 133530 155390 171500 155750 179400 188180 176020 203860 186110 185380 198700 206020 173110 184590 226600 213610 223520 141270 122530 157760 170160 162660 180700 188300 180390 206050 187960 192080 200310 208620 182240 189920 226550 204170 212300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 167560000 13289 1402 12574 25513;25514 20499;20500 20500 2 9606 Homo sapiens 0.06481320532111567 ILEEFRK Unmodified 933.52837 0.5283668 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;Q9BXJ9-4;A0A8V8TQT7 NAA15;NARG1 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 1 7 0 1 50.58 50.662 3 0.0098943 13879 20230619_1887_Aki_TMTPro18x_K_F7 82.305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13290 2297 12575 25515 20501 20501 1 9606 Homo sapiens 0.05894375277136987 ILEEGPFHK Unmodified 1068.5604 0.56039521 4180 Q7Z7L1 SLFN11 Schlafen family member 11 yes yes 0 0 0 6 0 1 51.232 51.309 3 0.011019 14463 20230619_1886_Aki_TMTPro18x_K_F6 76.17 53.098 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13291 4180 12576 25516 20502 20502 1 9606 Homo sapiens 0.028857429602794582 ILEFFGLK Unmodified 965.5586 0.5586043 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;Q96C96 P4HB Protein disulfide-isomerase yes no 0 0 0 4.2 0.748 1 2 2 65.636 65.664 2;3 0.0017919 20414 20230619_1885_Aki_TMTPro18x_K_F5 146.35 95.387 532160 438010 467560 519210 476260 591850 586470 606460 648530 621270 583340 640420 637110 540060 336770 813180 322050 727190 491590 401700 480920 518710 497650 593150 586830 618810 654680 627610 603860 646120 634130 574700 349810 806420 311080 690110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 707150000 13292 537 12577 25517;25518;25519;25520;25521 20503;20504 20504 2 9606 Homo sapiens 0.07444733942338644 ILEFIAVSQLR Unmodified 1287.7551 0.75507227 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0;K7ER27;A4VCH6 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 4.5 0.5 1 1 64.884 64.911 3 0.084572 20403 20230619_1883_Aki_TMTPro18x_K_F4 37.995 20.609 8341.5 5385.4 7241.3 7109.7 7594.8 9008.8 8551 10069 10672 8227.1 11226 7671.6 10154 8802.1 10755 9638.4 11009 8558.2 7694.5 4949.4 7453.1 7065.4 7897.3 8985.4 8636.1 10155 10759 8401.2 11422 7871.6 10426 9085.1 10932 9617.3 10514 8149 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14768000 13293 2417 12578 25522;25523 20505 20505 1 9606 Homo sapiens 0.1227049404542413 ILEGGPILPK Unmodified 1035.6328 0.63283187 4088 Q643R0;Q9ULW0;Q9ULW0-2;B3KM90 HCTP4;TPX2 Targeting protein for Xklp2 yes no 0 0 0 1 0 1 59.608 59.608 3 0.016682 18355 20230619_1880_Aki_TMTPro18x_K_F1 64.297 34.554 20934 16440 18317 22087 13872 20744 15667 15955 18705 23659 24240 22166 22021 22379 19431 25134 22457 23314 19332 15099 18783 21811 14865 20955 15804 16846 19122 23453 24494 22583 22446 23206 20004 25098 21463 22160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19675000 13294 4088 12579 25524 20506 20506 1 9606 Homo sapiens 0.11644077033838585 ILEGTETTK Unmodified 990.52334 0.523341 1684 Q8NBL6;G5E9W7;H7C5L9;A0A8I5KYF1;A0A8I5KSY5;A0A7P0MKV3;P82650;A0A8I5KQR7;H7C5F2;H7C5H3;A8K9Y7;A0A8I5KX02;P82650-2 MRPS22 28S ribosomal protein S22, mitochondrial yes no 0 0 0 4 0 1 46.623 46.666 2 8.9309E-07 12454 20230619_1883_Aki_TMTPro18x_K_F4 161.79 106.11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13295 1684 12580 25525 20507 20507 1 9606 Homo sapiens 0.027700266238525728 ILEHMPVSNQKPDTDEAEDPEK Unmodified 2521.1642 0.16424773 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8;A0A8V8TQ76;A0A8V8TRI2 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 0 1 4.5 0.5 1 1 48.532 48.589 4 0.0042996 13154 20230619_1885_Aki_TMTPro18x_K_F5 69.259 62.066 113260 100330 119340 125650 117950 141420 130640 119040 134160 139080 138890 146480 157260 130080 135890 161230 159590 172830 104830 92038 120760 125000 123010 141270 131110 123740 136740 139720 143140 147810 158900 136410 140010 162080 152550 163980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 70714000 13296 117 12581 25526;25527 20508;20509;20510 20510 3 9606 Homo sapiens -0.035487819457557634 ILELDQELIK Unmodified 1212.6966 0.69655434 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7;Q32P42;A8K3I2;E7EN38;A0A494C122;E7ESD9;A0A494BZX5;A0A494C0Y7 RAD50 DNA repair protein RAD50 yes no 0 0 0 4 0 1 62.911 62.918 3 0.038561 19590 20230619_1883_Aki_TMTPro18x_K_F4 50.284 35.593 16273 14598 15487 15947 18376 16869 18574 19405 20918 18157 22238 20523 20644 19526 22316 22109 18986 20635 15050 13374 15840 16017 18840 17060 18792 19613 21217 18492 22678 20710 21207 20298 22479 22098 18210 19609 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29988000 13297 4309 12582 25528 20511 20511 1 9606 Homo sapiens 0.09871392680292956 ILELLRPDPNTGK Unmodified 1464.83 0.83002813 3931 Q15393;A8K6V3;Q15393-2;I3L4G7 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 1 2 0 1 59.843 59.855 3 1.0176E-06 18488 20230619_1881_Aki_TMTPro18x_K_F2 143.05 120.73 327410 254390 286460 345160 299210 349300 347920 352150 355950 382470 380900 382730 390050 349880 347320 450200 365670 467220 302340 233680 294990 341050 311280 352860 348280 360390 363340 384840 390050 387540 395880 367270 355570 451410 350400 443220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 477470000 13298 3931 12583 25529 20512 20512 1 9606 Homo sapiens 0.11620631785967817 ILELSGSSSEDSEK Unmodified 1479.694 0.69404774 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2.71 1.03 1 2 2 2 53.079 53.11 2;3 8.0433E-09 15564 20230619_1882_Aki_TMTPro18x_K_F3 157.52 147.46 389750 334520 378460 428540 442560 480990 480750 468040 465620 485440 527420 530940 544000 459860 468880 589900 548700 613260 360420 306980 386700 425670 455450 482090 482070 479560 477810 490950 538970 534740 551120 483620 483220 591620 524670 581990 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1897999999.9999998 13299 3758 12584 25530;25531;25532;25533;25534;25535;25536 20513;20514;20515;20516 20515 4 9606 Homo sapiens -0.026611523059727915 ILENSEDSSPECLF Unmodified 1638.7083 0.70831759 799 A0A087WSW7;Q6I7N8;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9 HELLS Lymphoid-specific helicase yes no 0 0 0 1.5 0.5 1 1 64.414 64.418 2 0.0031116 20300 20230619_1880_Aki_TMTPro18x_K_F1 83 71.467 4904 3503.2 2997.1 3619 2611 4735.4 4066.1 3673.9 5162.4 5209.1 3833.8 5395.9 5878.8 5127.1 3862.5 7401.3 5174.5 4843.3 4516.4 3210.6 3203.8 3660.1 2803.2 4676.2 4046.3 3868.1 5148.9 5190.2 4094.2 5457.9 5842.5 5412.6 4055.1 7247.8 4935.9 4628.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33061000 13300 799 12585 25537;25538 20517 20517 1 9606 Homo sapiens -0.08548823149340024 ILEPGLNILIPVLDR Unmodified 1674.008 0.0079924964 4673 Q9UJZ1;Q9UJZ1-2 STOML2 Stomatin-like protein 2, mitochondrial yes no 0 0 0 2 0 1 66.24 66.247 2 0.043154 21296 20230619_1881_Aki_TMTPro18x_K_F2 57.836 7.7128 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13301 4673 12586 25539 20518 20518 1 9606 Homo sapiens 0.19794881985171742 ILEQEEEEEQAGKPGEPSK Unmodified 2126.0015 0.0015227276 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5 SRRT Serrate RNA effector molecule homolog yes no 0 0 1 2 0.816 1 1 1 48.41 48.459 4 9.3157E-05 13485 20230619_1882_Aki_TMTPro18x_K_F3 90.968 82.975 62377 48188 55810 59655 55389 68993 64985 70312 79422 68561 79637 65533 81595 70001 68124 88670 78195 79263 57608 44223 57270 59432 57922 69062 65429 71664 80049 69323 81670 66930 82584 73037 70182 88219 74727 75380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 403680000 13302 4464 12587 25540;25541;25542 20519;20520 20520 2 9606 Homo sapiens -0.016437972854873806 ILEQQNSSR Unmodified 1073.5465 0.54653606 1949 Q8TC62;E7EPK1;A4GYY8;Q3LIE9;Q16181;Q16181-2;E7ES33;B4DUD6;B4DNE4;A8K3D0;A0A024RA87;A0A023T695;G3V1Q4;B4DPQ6;Q5JXL7;A4D1Y2 SEPT7;DKFZp686F17268;Nbla02942;DKFZp586I031;LOC392884 Septin-7 yes no 0 0 0 4.5 0.5 1 1 37.075 37.143 2 4.4441E-05 8409 20230619_1883_Aki_TMTPro18x_K_F4 186.41 124.3 101700 54356 120560 132420 159000 175140 145420 183360 162570 126420 187440 212210 170500 153470 173920 91692 199270 207590 93984 50458 121560 127720 161700 173850 148050 185110 165440 133390 190590 209350 174760 157060 177720 99904 190470 195910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 255580000 13303 1949 12588 25543;25544 20521;20522 20521 2 9606 Homo sapiens 0.01270465461175263 ILEVHIDK Unmodified 965.55458 0.55458155 3532 P31689;P31689-2;B7Z5C0;Q9NXZ8 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 yes no 0 0 0 6.33 1.25 1 1 1 50.972 51.048 3 0.0014083 14396 20230619_1886_Aki_TMTPro18x_K_F6 114.84 25.594 162470 130770 159330 179950 138950 178780 170700 185690 215780 211660 205900 192860 242860 178370 172880 247660 222940 212940 150190 120130 161960 177640 147060 180930 171730 189880 216930 211950 213150 196290 243220 188240 180200 245590 212750 202650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 697960000 13304 3532 12589 25545;25546;25547 20523;20524 20523 2 9606 Homo sapiens 0.07042644448620194 ILEVHVDK Unmodified 951.53893 0.53893149 409 A0A024R6S1;O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes no 0 0 0 6 0.816 1 1 1 48.354 48.435 3 0.00064666 13154 20230619_1886_Aki_TMTPro18x_K_F6 129.1 68.126 406700 326930 364110 398500 372720 410070 433350 421920 468350 489280 481650 479040 576680 438420 409870 605550 553390 513310 375700 299930 373770 396760 388160 414110 434520 432050 475960 490510 497520 485660 577390 462530 428700 600090 527810 488660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1170800000 13305 409 12590 25548;25549;25550 20525;20526 20526 2 9606 Homo sapiens 0.06122357931565148 ILEVNHVNVEGATHK Unmodified 1658.874 0.87401821 4378 Q96L92-3;Q96L92 SNX27 Sorting nexin-27 yes no 0 0 0 6.5 0.5 1 1 44.512 44.598 4 5.6785E-14 11548 20230619_1886_Aki_TMTPro18x_K_F6 181.51 154.96 130830 100950 127450 138920 131930 160760 141610 142300 175720 169990 172990 163380 192530 159700 175440 204700 206950 201540 120910 92745 129910 137410 137120 160410 143290 147380 177000 170170 178410 166140 195070 167270 180600 204710 197660 191480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 218870000 13306 4378 12591 25551;25552 20527;20528 20527 2 9606 Homo sapiens 0.07093616212296183 ILFFNTPK Unmodified 978.55385 0.55385327 1850 Q5U0B3;R4GMR5;V9HW09;A0A8V8TQ44;P48556;K7EJR3;A0A8V8TPK1;A0A8V8TR48;K7EJC1;B4E2Y4 PSMD8;HEL-S-91n 26S proteasome non-ATPase regulatory subunit 8 yes no 0 0 0 4.5 0.5 1 1 62.204 62.231 3 0.079219 18868 20230619_1885_Aki_TMTPro18x_K_F5 43.246 21.74 27423 21720 22268 31303 28842 32816 31682 25840 35500 27909 21892 22540 27190 19157 30143 29061 29472 29186 25312 19964 23207 30813 29536 32898 31864 26961 35406 27956 23354 23012 27704 20423 30555 29051 28203 27720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75723000 13307 1850 12592 25553;25554 20529 20529 1 9606 Homo sapiens 0.06371849799563734 ILFLDPSGK Unmodified 988.55933 0.55933258 3365 O95881 TXNDC12 Thioredoxin domain-containing protein 12 yes yes 0 0 0 1.5 0.5 1 1 62.649 62.653 2 0.0013078 19564 20230619_1880_Aki_TMTPro18x_K_F1 134.48 48.006 421090 361750 373370 386110 370310 448600 426850 428080 450590 487360 502650 537720 549190 464410 530350 577610 567350 633130 389130 331390 383340 388930 386810 448460 427960 440300 460010 490800 515650 541110 558130 487550 541950 581560 542930 600520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 251740000 13308 3365 12593 25555;25556 20530;20531 20530 2 9606 Homo sapiens 0.06459528591381059 ILFQPQTNVYDSLAK Unmodified 1735.9145 0.91448604 2096 B3KM89;A8K6V0;O94855;O94855-2;E9PDM8;Q49AI3;E9PC44 SEC24D Protein transport protein Sec24D yes no 0 0 0 2.5 0.5 1 1 62.496 62.515 3 1.4523E-10 19738 20230619_1881_Aki_TMTPro18x_K_F2 125.28 114.81 88139 78598 89426 104850 96104 128690 126170 121920 141850 113620 106170 88391 123300 94525 105760 126730 101010 107660 81555 72148 90988 104000 100270 128080 125890 124770 142130 114580 111240 91212 124400 99056 107710 125710 96737 102430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238060000 13309 2096 12594 25557;25558 20532 20532 1 9606 Homo sapiens 0.07596537812105453 ILFTEATR Unmodified 949.52328 0.52328142 1850 Q5U0B3;R4GMR5;V9HW09;A0A8V8TQ44;P48556;K7EJR3;A0A8V8TPK1;A0A8V8TR48;K7EJC1;B4E2Y4 PSMD8;HEL-S-91n 26S proteasome non-ATPase regulatory subunit 8 yes no 0 0 0 8 0 1 51.982 52.059 2 0.0022182 14414 20230619_1888_Aki_TMTPro18x_K_F8 130.22 92.088 410520 363770 377430 424890 358010 444940 451710 458330 505890 508480 480370 488120 542510 461200 496770 609600 530390 554820 379540 333480 386260 424400 376400 448640 451720 468610 511460 510570 496880 495730 549590 484430 508450 606810 507310 527460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 361680000 13310 1850 12595 25559 20533 20533 1 9606 Homo sapiens 0.046500714145167876 ILFVSQGSEIASQGR Unmodified 1590.8366 0.83657007 2395 H0Y9B0;H0YA18;B3KRI4;Q9NUQ7 UFSP2 Ufm1-specific protease 2 yes no 0 0 0 1 0 1 57.109 57.109 3 1.0978E-07 17310 20230619_1880_Aki_TMTPro18x_K_F1 128.85 116.68 35964 33839 31720 39026 35986 38714 40278 38816 44396 38878 41123 45945 47829 32444 40138 40797 40472 44490 33254 31011 32686 38982 37158 39185 40481 39665 44856 39500 42670 45844 48176 34392 40973 41069 38748 42203 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41424000 13311 2395 12596 25560 20534 20534 1 9606 Homo sapiens 0.0647852494671497 ILGADTSVDLEETGR Unmodified 1574.7788 0.77878042 3504 V9HW26;P25705;P25705-2;P25705-3;K7EK77;B4DGW3;K7ERX7;K7EJP1;K7EQH4;K7ESA0 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 2 0 1 55.187 55.208 2 8.3844E-49 16671 20230619_1881_Aki_TMTPro18x_K_F2 333.92 290.63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13312 3504 12597 25561 20535 20535 1 9606 Homo sapiens 0.014382182305780589 ILGAWLAEETSSLR Unmodified 1544.8199 0.81985738 4651 Q9UBB6-2;Q9UBB6 NCDN Neurochondrin yes no 0 0 0 8 0 1 64.959 64.979 3 7.2264E-07 19943 20230619_1888_Aki_TMTPro18x_K_F8 102.73 77.409 9038.6 9661.9 8217.3 11001 8560.1 11013 8553.3 11760 11233 12183 12391 12041 13652 11773 11580 14005 14897 14578 8367.5 8849.8 8438.5 11000 8883.7 11150 8718.1 11965 11346 12282 12709 12226 13799 12273 12008 14063 14219 13842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39923000 13313 4651 12598 25562 20536 20536 1 9606 Homo sapiens 0.06924024060754164 ILGENEEEEDLAESGR Unmodified 1788.8014 0.80136636 4737 Q9Y4C8 RBM19 Probable RNA-binding protein 19 yes yes 0 0 0 1 0 1 51.218 51.218 3 7.8115E-13 14862 20230619_1880_Aki_TMTPro18x_K_F1 169.69 165.97 41555 39242 47411 44148 43892 49389 45230 40585 46690 46565 46062 35245 40619 35888 57392 49423 45683 38433 38507 35954 47600 44266 45891 49356 45587 42244 47469 46411 47018 36367 42425 37702 57373 48863 43773 36647 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111580000 13314 4737 12599 25563 20537 20537 1 9606 Homo sapiens -0.061482271624299756 ILGIPVIVTEQYPK Unmodified 1568.9178 0.91778051 4332 Q96CN7;D6RGE2;Q9Y3B5 ISOC1 Isochorismatase domain-containing protein 1 yes no 0 0 0 2.5 0.5 1 1 63.838 63.858 3 1.436E-08 20060 20230619_1882_Aki_TMTPro18x_K_F3 147.71 124.47 133150 119330 113450 156680 179440 198690 153330 203990 183160 203170 231940 283200 231310 215270 201790 220930 256390 269090 123040 109520 118140 155640 180560 197800 157150 207840 186970 207680 235960 281350 234840 224520 208830 224580 244870 255020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 488980000 13315 4332 12600 25564;25565 20538 20538 1 9606 Homo sapiens 0.1560783265676946 ILGLLDAYLK Unmodified 1117.6747 0.67469669 3510 Q53YD7;P26641;P26641-2;B4DUP0;B4DUK7 EEF1G Elongation factor 1-gamma yes no 0 0 0 3 0 1 66.451 66.487 3 0.0037364 21123 20230619_1882_Aki_TMTPro18x_K_F3 84.213 52.841 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13316 3510 12601 25566 20539 20539 1 9606 Homo sapiens 0.12056632722351424 ILGPFHK Unmodified 810.47521 0.47520902 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 4 0 1 49.405 49.44 3 0.0061129 13708 20230619_1883_Aki_TMTPro18x_K_F4 102.98 48.455 194500 148360 175260 181380 163610 212690 192940 202510 243290 196060 189250 182740 210010 166430 178260 234080 204720 196020 179620 136140 179530 180890 172030 212370 194400 207360 242740 198190 197550 185700 212140 175800 183590 231840 195560 186620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107420000 13317 4593 12602 25567 20540 20540 1 9606 Homo sapiens 0.062390422851422045 ILGPGLNK Unmodified 810.49634 0.49633839 3732 P62906;Q1JQ76;A0A024RCW3 RPL10A 60S ribosomal protein L10a;Ribosomal protein yes no 0 0 0 2.5 0.5 1 1 51.69 51.742 2 0.00113 14868 20230619_1882_Aki_TMTPro18x_K_F3 160.69 50.812 1367600 1195800 1238900 1244000 1424500 1529800 1529700 1394500 1779700 1552800 1624200 1596300 1871800 1462000 1423700 1842800 1831200 1654100 1264100 1095200 1272100 1256700 1468000 1522900 1543500 1438400 1792400 1562900 1683900 1614700 1880800 1533000 1480300 1834000 1746900 1573700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4226099999.9999995 13318 3732 12603 25568;25569 20541 20541 1 9606 Homo sapiens 0.08351007593989834 ILGPQGNTIK Unmodified 1039.6026 0.60259438 3807 Q07666;B4DDX2;B2R7B5;Q07666-2;B4E043 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 0 0 0 3 0 1 49.219 49.297 2 2.6303E-23 13812 20230619_1882_Aki_TMTPro18x_K_F3 211.56 125.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13319 3807 12604 25570 20542 20542 1 9606 Homo sapiens 0.08437718368668357 ILGQEGDASYLASEISTWDGVIVTPSEK Unmodified 2964.4604 0.46041298 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 5 0 1 65.734 65.777 3 8.0977E-29 20478 20230619_1885_Aki_TMTPro18x_K_F5 170.27 158.65 12454 11576 8123.4 11277 10362 10890 9717 11419 10580 14159 14804 15830 16365 13264 13386 13846 12860 14736 11493 10594 8662.7 11412 10576 11063 9869.3 11700 10916 14204 15062 15899 16501 13800 13638 13955 12323 13980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9155700 13320 2621 12605 25571 20543 20543 1 9606 Homo sapiens 0.05676119042936989 ILGTAGTEEGQK Unmodified 1202.6143 0.61428128 1489 A0A384P5L2;Q08257;A6NP24;Q08257-3;C9JH92;Q08257-2 CRYZ Quinone oxidoreductase yes no 0 0 0 4.5 0.5 1 1 46.44 46.5 2 1.3221E-09 12393 20230619_1883_Aki_TMTPro18x_K_F4 221.5 156.25 37535 29158 34346 39918 50961 58255 51000 50161 70286 41001 55352 58627 58402 47834 52775 51425 61338 61015 34672 26787 35450 39645 51675 57306 51977 51556 69801 42529 57643 58362 59242 49897 54226 52165 58603 57852 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40259000 13321 1489 12606 25572;25573 20544 20544 1 9606 Homo sapiens 0.021078706013213377 ILGYINTGK Unmodified 977.55458 0.55458155 1475 P05091;A0A384NPN7;Q53FB6;P05091-2;B4YAH7;S4R3S4 ALDH2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 57.57 57.588 3 0.0029671 17311 20230619_1883_Aki_TMTPro18x_K_F4 71.379 42.218 47365 37476 52944 48863 53819 62641 65142 59331 63885 58293 80690 94282 69981 73720 77692 74584 90363 96055 43830 34407 53322 48600 56124 62203 64989 60838 65754 60061 81646 93349 72233 76704 79550 76154 86375 90985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 321540000 13322 1475 12607 25574;25575 20545 20545 1 9606 Homo sapiens 0.06490644448626881 ILHCLARPEAR Unmodified 1334.7241 0.72412327 2884 Q6NXR4;E5RIH5;E5RHM7 TTI2 TELO2-interacting protein 2 yes no 0 0 1 4 0 1 38.178 38.221 4 0.005077 8831 20230619_1883_Aki_TMTPro18x_K_F4 69.01 35.124 18486 14178 21178 26035 22381 19380 21924 22031 24442 24232 27551 24600 28796 23549 21680 20958 30964 25936 17108 13075 21329 25209 23090 20162 22220 22397 24884 24382 28146 24921 29011 24204 22675 21388 29501 24600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23663000 13323 2884 12608 25576 20546 20546 1 9606 Homo sapiens 0.07015017459502815 ILHDQHCQMSSK Oxidation (M) 1498.6657 0.66568169 3607 P49454 CENPF Centromere protein F yes yes 0 1 0 6 0 1 31.55 31.583 4 0.0081146 6355 20230619_1886_Aki_TMTPro18x_K_F6 71.241 60.773 19042 10020 26346 23951 38093 38978 22710 28822 31436 16430 23592 20740 15835 14267 23567 13576 21657 17588 17624 9298.8 26306 23209 38201 38016 24082 29791 31173 17429 24225 20653 16782 14893 23666 13913 20712 16678 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12383000 13324 3607 12609 25577 20547 20547 2290 1 9606 Homo sapiens -0.06370451967927693 ILHILGSIR Unmodified 1020.6444 0.64439961 2316 Q86TY2;V9GYX7;Q05DQ7;Q53HF6;Q53H79;B2RDG9;Q9NZ32;Q86SY7 ACTR10 Actin-related protein 10 yes no 0 0 0 7 0 1 56.613 56.671 3 0.00013516 16438 20230619_1887_Aki_TMTPro18x_K_F7 114.89 72.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13325 2316 12610 25578 20548 20548 1 9606 Homo sapiens 0.13490318847857452 ILHLLGK Unmodified 792.52216 0.52215921 1219 A0A140VK12;Q9UBF2;Q9H9B7;Q9UBF2-2;B3KND4;Q9NUP3;H3BS45;B2RBK6;F5H1S1;Q92521 COPG2;PIGB Coatomer subunit gamma-2;Coatomer subunit gamma;GPI mannosyltransferase 3 yes no 0 0 0 5 0 1 56.422 56.484 3 0.013517 16450 20230619_1885_Aki_TMTPro18x_K_F5 85.849 27.271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13326 1219 12611 25579 20549 20549 1 9606 Homo sapiens 0.11759901836273912 ILHLLGQEGPK Unmodified 1203.6976 0.69755739 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 2 0 1 54.477 54.501 3 1.234E-09 16341 20230619_1881_Aki_TMTPro18x_K_F2 189.58 140.79 139660 106150 133880 157410 140080 160670 166680 155590 183430 181110 166260 164090 198660 164120 163910 223180 187940 201270 129040 97616 136740 154720 145780 162040 166990 160030 185320 181190 172780 167450 200070 172430 168950 221920 179680 191350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165040000 13327 4753 12612 25580 20550 20550 1 9606 Homo sapiens 0.10385651839851562 ILHTAWHPK Unmodified 1101.6083 0.60834846 1204 A0A140VJT0;P63151;P63151-2;Q56VW8;A0A590UJY3;A0A590UJJ1;Q6ZP32 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B yes no 0 0 0 4 0 1 41.977 42.02 3 0.0035932 10390 20230619_1883_Aki_TMTPro18x_K_F4 80.231 1.0297 162260 112730 149330 146720 175670 168800 161010 164570 222520 141040 155150 134060 148860 125900 146160 164010 198570 132760 149800 103550 153100 145690 179940 168970 165070 167770 220270 143770 161930 136300 152100 132120 151640 162410 189030 126660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122360000 13328 1204 12613 25581 20551 20551 1 9606 Homo sapiens 0.06160861670969098 ILHTYYK Unmodified 936.5069 0.50690308 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 3.5 0.5 1 1 44.533 44.591 3 0.00041172 11564 20230619_1883_Aki_TMTPro18x_K_F4 160.91 88.681 378760 275150 331430 339920 409960 430820 429770 402950 526710 195060 193210 145950 167720 129750 278300 210710 203510 129440 349620 252570 341860 339180 420210 428090 434780 408050 516710 207440 212750 150300 177280 138620 276520 206130 194920 124080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 238760000 13329 12 12614 25582;25583 20552;20553 20553 2 9606 Homo sapiens 0.03610990248421331 ILIANTGMDTDK Oxidation (M) 1306.6439 0.64386684 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 1 0 5.2 0.748 1 2 2 50.679 50.746 2;3 1.4261E-05 14043 20230619_1885_Aki_TMTPro18x_K_F5 125.82 110.43 402270 330380 379280 419050 440310 437450 428850 425690 497980 458630 503750 488730 521280 441010 481660 537890 497740 511510 371810 303200 388280 416120 451960 440820 435250 436650 503600 462750 517250 493370 529540 461560 491690 537370 476170 486060 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1124000000 13330 3756 12615 25584;25585;25586;25587;25588 20554;20555;20556;20557 20555 2426 4 9606 Homo sapiens 0.0028106655513511214 ILIANTGMDTDK Unmodified 1290.649 0.64895222 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 5.5 0.5 1 1 55.126 55.198 3 3.1444E-07 16082 20230619_1886_Aki_TMTPro18x_K_F6 158.34 142.47 317200 269660 297180 308980 268350 334470 313180 329020 345020 369760 340220 315180 434610 341120 358830 406410 379770 354190 293220 247200 303230 309240 282590 336120 314300 337510 349800 369860 353240 323490 436760 354600 367610 404340 362980 337060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 751210000 13331 3756 12615 25589;25590 20558 20558 1 9606 Homo sapiens 0.015253704177666805 ILIDSIYK Unmodified 963.56408 0.56408361 1380 A0A2U3TZV8;Q4KWH8-3;Q4KWH8-4;Q4KWH8-2;Q4KWH8 PLCH1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 yes no 0 0 0 8 0 1 59.517 59.559 3 0.001886 17632 20230619_1888_Aki_TMTPro18x_K_F8 109.86 55.313 19486 14970 14810 19959 14954 21724 16920 16575 28453 12842 12467 12888 13642 13562 16638 15216 16202 13585 17976 13749 15472 19754 15652 21698 17287 17199 27645 13223 13602 13111 14051 14043 16833 15181 15488 12930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12112000 13332 1380 12616 25591 20559 20559 1 9606 Homo sapiens 0.08084412734137914 ILIEAGK Unmodified 742.45889 0.45889025 84 Q96S66;A0A6Q8PG75;Q96S66-2;A0A6Q8PEZ7;A0A024R0G0;A0A6Q8PHQ1;A0A6Q8PG30;A0A024R095;A0A6Q8PGA4;Q96S66-4;Q96S66-3;A0A8I5KRC0;A0A6Q8PG14;Q5T1P5;A0A6Q8PG68;A0A6Q8PFT6;A0A6Q8PF11;A0A8I5KXB0;A0A6Q8PFH1;A0A6Q8PF97;B3KQX4 CLCC1 Chloride channel CLIC-like protein 1 yes no 0 0 0 7 0 1 51.654 51.728 2 0.022161 14353 20230619_1887_Aki_TMTPro18x_K_F7 91.906 20.994 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13333 84 12617 25592 20560 20560 1 9606 Homo sapiens 0.07735916328385883 ILIEDSDQNLK Unmodified 1286.6718 0.67179615 1855 A0A8V8TQW4;O14617-4;O14617;O14617-5;O14617-2;Q6PK82;O14617-3;A0A2R8Y4J3 AP3D1 AP-3 complex subunit delta-1 yes no 0 0 0 3.67 0.471 1 2 54.939 54.969 2 3.4792E-11 16214 20230619_1883_Aki_TMTPro18x_K_F4 185.71 134.83 25603 18354 22787 25691 21053 22507 26551 23398 27077 28005 28012 27918 34774 27341 23797 36499 35003 38788 23635 16871 23374 25294 22148 23020 26466 23982 27605 28054 28982 28344 34750 28724 25081 36615 33409 36803 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38005000 13334 1855 12618 25593;25594;25595 20561;20562 20562 2 9606 Homo sapiens 0.039927128068939055 ILIEDWK Unmodified 915.50657 0.50656873 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;A0A0S2Z4D8;A0A0S2Z4W7;K7EPW7;A0A7I2V2T6;A2VCQ4;A0A0S2Z4A0 PRKCSH Glucosidase 2 subunit beta yes no 0 0 0 6.5 0.5 1 1 61.654 61.701 2 0.0062285 18535 20230619_1887_Aki_TMTPro18x_K_F7 134.66 87.596 590260 483520 538140 583300 496940 691670 646980 710110 808000 770230 771570 906940 862260 742590 770320 851320 881720 1013400 545400 443520 550900 582380 524940 691220 648720 725500 812570 779300 798210 908420 872960 777310 791550 862570 843460 960310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1095900000 13335 444 12619 25596;25597 20563 20563 1 9606 Homo sapiens 0.04543570528562668 ILIEENRK Unmodified 1013.5869 0.58694431 3283 O60568;B3KQQ3;Q9UG85;H7C0B8;H7C2V1 PLOD3;DKFZp564O1822 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes no 0 0 1 6.5 0.5 1 1 42.481 42.566 3 0.0060767 10331 20230619_1887_Aki_TMTPro18x_K_F7 88.921 43.96 237930 188490 252330 254230 352940 298610 294340 381530 330040 268370 341640 359590 323530 274320 312730 327810 389870 351730 220080 173120 256530 252020 356330 300620 301520 380690 334480 279920 349320 358150 330330 288570 322520 329870 372010 333960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 229750000 13336 3283 12620 25598;25599 20564 20564 1 9606 Homo sapiens 0.08069431851617992 ILIENGVAER Unmodified 1112.619 0.61897272 4491;3802 Q05CW7;E9PMU0;E9PJN6;Q9H0A0 NAT10 N-acetyltransferase 10 no no 0 0 0 4 0 1 48.419 48.459 2 0.04455 13287 20230619_1883_Aki_TMTPro18x_K_F4 66.92 38.522 70836 50227 61500 63609 63754 80941 76679 67615 90935 84125 80960 82155 85366 74660 85606 81053 88051 91059 65374 46121 63318 63356 66513 80197 76970 70450 91432 84114 83752 83206 87015 77614 87154 81929 84243 86371 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54941000 13337 3802;4491 12621 25600 20565 20565 1 9606 Homo sapiens 0.06716799534751772 ILIGNPGCTYK Unmodified 1234.638 0.63799361 1260 A0A1B0GVH5;A0A1B0GTC3;B3KU60;Q9C0B1;A0A1B0GUC3;A0A1B0GU26;A0A1B0GTC5;A0A1B0GV98;A0A1B0GTY1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes no 0 0 0 3 0 2 54.19 54.237 2;3 1.8142E-11 16050 20230619_1882_Aki_TMTPro18x_K_F3 174.41 132.97 67611 72829 98202 84067 127110 108630 126900 120100 144260 115740 130660 112570 104460 90892 113830 131370 127640 110680 62876 66715 97548 84369 129390 108340 128450 121750 145320 117140 133440 113810 107930 96572 116440 130160 121880 105410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37073000 13338 1260 12622 25601;25602 20566;20567 20567 2 9606 Homo sapiens 0.030060128341574455 ILIIGESGVGK Unmodified 1084.6492 0.64921022 4557 Q9NP72;Q9NP72-2;B7Z5V3;B7Z4P9;Q5W0J0;A0A804HIB9;Q9NP72-3;A0A8C8NLQ3;Q9BZT2;A0A087X163;A0A804HK95;A0A804HLG5;A0A804HIM2;A0A804HJ83;A0A804HKV1 RAB18 Ras-related protein Rab-18 yes no 0 0 0 4.5 3.5 1 1 59.636 59.636 3 5.7923E-05 18315 20230619_1880_Aki_TMTPro18x_K_F1 128.81 111.44 85808 68536 73345 85265 74267 95792 76242 81854 102460 112990 103540 133700 140890 130470 91661 175140 153300 198220 79237 62891 75636 84848 77315 95719 77600 85416 103070 113170 107960 134680 140420 137040 97954 176280 146390 187860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102110000 13339 4557 12623 25603;25604 20568;20569 20568 2 9606 Homo sapiens 0.11027158199954101 ILIQHQK Unmodified 878.53379 0.53378653 3148 J3QRS9;Q59G94;X6R4W8;O43670-2;O43670;O43670-4;O43670-3 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes no 0 0 0 2.5 0.5 1 1 39.513 39.575 3 0.0010092 9454 20230619_1882_Aki_TMTPro18x_K_F3 154.11 67.601 491410 388300 434060 512570 552700 650240 579980 534970 710880 626550 612900 642500 630060 534860 597950 631960 729170 618490 453860 356550 448080 508950 566060 644260 586920 557010 712820 629090 634420 647660 641170 560390 615960 632720 695630 587990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 774020000 13340 3148 12624 25605;25606 20570;20571 20571 2 9606 Homo sapiens 0.08966098859616523 ILISLATGHR Unmodified 1079.6451 0.64512789 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 0 6.5 0.5 1 1 53.27 53.343 3 5.5214E-09 15345 20230619_1886_Aki_TMTPro18x_K_F6 194.06 122.37 38012 31958 42867 47255 46674 53982 45575 49267 49512 48877 51774 53173 51686 51371 50591 50435 54332 62158 35192 29376 43227 46529 48156 53942 46163 50639 50320 49554 53027 53717 52753 52987 51671 51358 52002 58885 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105910000 13341 1062;1064 12625 25607;25608 20572;20573 20572 2 9606 Homo sapiens 0.10849113496919927 ILISLATGHREEGGENLDQAR Unmodified 2278.1666 0.16657142 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 1 6 0.816 1 1 1 50.65 50.728 4 6.1943E-05 14061 20230619_1885_Aki_TMTPro18x_K_F5 90.22 73.536 132160 116300 113210 118260 133110 134330 120750 145360 117150 135560 139500 114680 138820 122110 132230 152640 155870 154250 122120 106480 116870 119570 136280 134950 122480 147370 120560 136830 141900 117780 141430 127350 135990 152920 148890 146490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1040099999.9999999 13342 1062;1064 12626 25609;25610;25611 20574;20575 20574 2 9606 Homo sapiens 0.07861479364919433 ILITTVPPNLR Unmodified 1235.7602 0.76015765 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 4.83 0.687 2 3 1 58.574 58.61 2;3 4.2842E-05 17272 20230619_1885_Aki_TMTPro18x_K_F5 133.44 109.1 85825 70877 87767 92070 78707 91084 93257 96082 98205 101050 95200 92058 95671 83357 93595 89873 84024 88937 79379 65060 88891 91232 82877 92277 93376 97941 99685 101570 97834 93547 97521 86619 94664 90186 80520 84465 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 398070000 13343 2621 12627 25612;25613;25614;25615;25616;25617 20576;20577;20578;20579 20577 4 9606 Homo sapiens 0.151707979080129 ILIVGGGVAGLASAGAAK Unmodified 1523.9035 0.90352742 87 Q2TB59;A0A024R0C3;Q13423;A0A590UJM2;A0A590UK29;E9PCX7;A0A590UJI3 NNT NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 5 0 1 62.392 62.438 2 8.9722E-07 19002 20230619_1885_Aki_TMTPro18x_K_F5 114.71 87.595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13344 87 12628 25618 20580 20580 1 9606 Homo sapiens 0.1625318022850024 ILKPTDENLLK Unmodified 1282.7497 0.74965254 2887 E5RIZ4;Q9P015;B2R739 MRPL15 39S ribosomal protein L15, mitochondrial yes no 0 0 1 1 0 1 53.644 53.644 3 0.0004401 15840 20230619_1880_Aki_TMTPro18x_K_F1 100.55 46.408 138760 122190 129490 151870 143940 171250 156120 162160 181030 154780 160540 151490 168460 143230 155640 173030 152530 168810 128300 112090 132690 151160 148840 171450 157480 166070 182140 156780 165970 153740 171070 149600 158420 173120 146080 160320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132520000 13345 2887 12629 25619 20581 20581 1 9606 Homo sapiens 0.11958770462933899 ILLAGCPSYDK Unmodified 1235.622 0.62200919 1643 A0A7I2SU25;Q6QNY7;Q6QNY6;Q6QNY5;Q9Y223-5;Q9Y223-3;Q9Y223;Q9Y223-2;Q9Y223-4 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes no 0 0 0 1 0 1 55.769 55.769 3 0.0001268 16749 20230619_1880_Aki_TMTPro18x_K_F1 117.52 94.147 72331 67201 64920 65504 59365 72812 67563 66196 66889 75813 71376 62305 73164 64381 64799 90922 77040 81629 66882 61497 66489 66436 62385 72949 67655 68337 68419 75688 73040 64009 74244 67740 66864 90336 73625 77613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66788000 13346 1643 12630 25620 20582 20582 1 9606 Homo sapiens 0.0136230659722969 ILLANFLAQTEALMR Oxidation (M) 1718.9389 0.93892665 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;B4DVJ0;CON__Q3ZBD7 GPI Glucose-6-phosphate isomerase yes no 0 1 0 5.5 0.5 1 1 65.735 65.778 3 0.00051746 20662 20230619_1886_Aki_TMTPro18x_K_F6 81.703 70.089 9624.7 7237.7 9481.6 11995 12154 10991 10539 14407 12650 10450 14110 11631 10401 11319 16423 10747 12080 11855 8894.1 6665.5 9695 11704 12353 11266 10797 14367 12812 10807 14240 11757 11030 11645 16323 10891 11598 11249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65547000 13347 1326 12631 25621;25622 20583 20583 830 1 9606 Homo sapiens 0.10821474693966593 ILLANFLAQTEALMR Unmodified 1702.944 0.94401203 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;B4DVJ0;CON__Q3ZBD7 GPI Glucose-6-phosphate isomerase yes no 0 0 0 6.5 0.5 1 1 67.798 67.83 3 1.1587E-18 21250 20230619_1887_Aki_TMTPro18x_K_F7 195.71 169.17 15726 8891.5 11918 11353 13866 9267.2 16521 15306 16851 16248 18935 15607 18896 14148 13479 19078 15730 11778 14484 8174.3 12444 11247 14278 9683.9 16509 15245 17226 16345 19298 15844 19014 14899 13957 18671 15001 11279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18144000 13348 1326 12631 25623;25624 20584 20584 1 9606 Homo sapiens 0.12065778556575424 ILLDHEK Unmodified 866.48617 0.48616764 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 4.5 0.5 1 1 43.678 43.74 3 0.0046615 11152 20230619_1883_Aki_TMTPro18x_K_F4 109.86 24.799 746750 596770 678900 734060 798210 858160 838330 798660 998820 751040 800260 743160 831510 656160 795630 918520 938030 775080 689880 547550 697440 731650 820910 857050 847600 818830 999830 761890 831470 752570 845890 693610 818150 910440 894990 738290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 555790000 13349 3650 12632 25625;25626 20585;20586 20585 2 9606 Homo sapiens 0.04758399868762808 ILLEAAR Unmodified 784.48069 0.48068833 2459 B4DE91;P49189;B4DX14;P49189-3;P49189-2;B4DYY1 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 6.5 0.5 1 1 49.365 49.446 2 0.023306 13329 20230619_1887_Aki_TMTPro18x_K_F7 100.74 45.138 259310 221010 220730 242220 297960 365090 354270 325910 395800 109680 134180 104180 95600 88403 207450 152280 154710 79022 239550 202510 228870 244510 305270 358830 354790 329870 389370 122820 148350 105920 104280 94926 205740 148100 148010 76110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135040000 13350 2459 12633 25627;25628 20587 20587 1 9606 Homo sapiens 0.0798272107693947 ILLGGYQSR Unmodified 1005.5607 0.56072956 2446 Q99459;B3KY60;B4DSH1 CDC5L Cell division cycle 5-like protein yes no 0 0 0 4 0 1 50.524 50.556 2 0.0060246 14238 20230619_1883_Aki_TMTPro18x_K_F4 84.743 45.097 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13351 2446 12634 25629 20588 20588 1 9606 Homo sapiens 0.05817162680136789 ILLNACCPGWVR Unmodified 1457.7272 0.72715974 1468 A0A384NL53;P16152 CBR1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 5.5 0.5 1 1 59.534 59.592 2 4.2538E-09 17932 20230619_1886_Aki_TMTPro18x_K_F6 219.19 200.58 281400 264010 266920 263580 245370 307110 296130 295950 326560 263090 216940 203080 256100 198910 254140 291750 276170 235250 260330 241640 272060 267000 258260 307030 296570 302180 326540 265950 229450 208940 260020 210300 259870 288420 263740 224190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 258930000 13352 1468 12635 25630;25631 20589;20590 20590 2 9606 Homo sapiens 0.016605245220034703 ILLNIEHR Unmodified 1006.5924 0.59236404 1858 A0A8V8TRG9;P42345;A0A8V8TQN3;B3KX59;Q96QW8 MTOR;FRAP1 Serine/threonine-protein kinase mTOR yes no 0 0 0 8 0 1 47.549 47.608 3 0.00023478 12490 20230619_1888_Aki_TMTPro18x_K_F8 155.1 155.1 21316 17283 18824 21021 17621 21384 20300 23195 25830 17815 20348 18179 20458 18251 20026 20707 17627 21887 19690 15855 19326 20929 18501 21631 20491 23422 25752 18317 21126 18461 20859 18954 20245 20834 16918 20760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24939000 13353 1858 12636 25632 20591 20591 1 9606 Homo sapiens 0.08933155434078799 ILLSSGR Unmodified 744.44939 0.4493882 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 2.5 1.12 1 1 1 1 44.659 44.708 2 0.024502 12009 20230619_1881_Aki_TMTPro18x_K_F2 99.139 0 737450 639320 678370 731630 781370 897990 763690 742550 1063400 744780 730050 610860 725790 575040 741470 783230 830960 642050 681700 586010 695920 733460 803970 891910 780000 769370 1052300 749430 763770 625640 741640 605480 758790 775760 792880 612010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1493299999.9999998 13354 3756 12637 25633;25634;25635;25636 20592;20593 20592 2 9606 Homo sapiens 0.06694148042868164 ILLSVVSMLAEPNDESGANVDASK Unmodified 2458.2261 0.22611971 3677 P60604;P60604-2;Q8NDD5 UBE2G2;DKFZp586L2318 Ubiquitin-conjugating enzyme E2 G2 yes no 0 0 0 7 0 1 67.058 67.081 3 1.1419999999999999E-19 20960 20230619_1887_Aki_TMTPro18x_K_F7 158.52 150.29 7699.5 7770.4 6867.7 7327.8 6040.1 8870.6 7815.7 6858.5 8019.1 8423.5 8620.2 9019.6 8137 9196 8619.4 10686 8222.4 10100 7123.5 7107.2 7039.1 7460.6 6405.4 8806.8 7783.5 7191.1 8182.9 8450.7 8800.3 9137.6 8357.8 9547 8747.2 10676 7884 9592.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13545000 13355 3677 12638 25637 20594 20594 1 9606 Homo sapiens 0.05533569473391253 ILLTEPPMNPTK Oxidation (M) 1368.7323 0.73228792 3690 P61160;P61160-2;B4DHK9;B4DWQ5;Q8IY98 ACTR2 Actin-related protein 2 yes no 0 1 0 4.5 3.5 1 1 54.294 54.33 3 9.9864E-05 15447 20230619_1888_Aki_TMTPro18x_K_F8 107.18 86.591 107190 90887 97457 116590 110590 126650 124060 114610 132470 116180 126140 111810 119460 105260 121090 132220 119290 120380 99065 83409 100140 115720 114240 127010 124530 118000 134160 117250 129350 113590 122230 110190 123070 131750 114160 114460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159880000 13356 3690 12639 25638;25639 20595;20596 20596 2378 2 9606 Homo sapiens 0.06267106865630012 ILLTEPPMNPTK Unmodified 1352.7374 0.7373733 3690 P61160;P61160-2;B4DHK9;B4DWQ5;Q8IY98 ACTR2 Actin-related protein 2 yes no 0 0 0 4.5 3.5 1 1 58.89 58.911 3 2.5156E-07 17332 20230619_1888_Aki_TMTPro18x_K_F8 160.67 137.3 154490 133910 148430 159590 146650 191360 153410 160420 196290 195580 189840 208250 226730 180060 196320 229870 222230 231810 142860 122790 151350 159460 152970 190330 155660 166950 197380 196200 196810 209850 228720 189360 201780 230210 212440 220120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 251540000 13357 3690 12639 25640;25641 20597;20598 20598 2 9606 Homo sapiens 0.07511410728238843 ILLTQENPFFR Unmodified 1376.7452 0.74523587 3813 Q08J23-2;Q08J23;Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 0 0 0 3.5 0.5 1 1 63.165 63.183 3 3.7651E-17 19743 20230619_1882_Aki_TMTPro18x_K_F3 224.75 190.38 21525 18110 20385 21810 16867 20911 22729 20444 21617 27368 22107 24595 28110 25161 26246 27040 25138 26462 19898 16610 20763 21713 17968 21202 22545 21112 22144 27197 22946 25096 28416 26033 26665 27112 24072 25135 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217600000 13358 3813 12640 25642;25643 20599 20599 1 9606 Homo sapiens 0.0719330603999424 ILLVGGR Unmodified 726.47521 0.47520902 4225 Q8N239 KLHL34 Kelch-like protein 34 yes yes 0 0 0 2.5 0.5 1 1 45.406 45.485 2 0.013544 12043 20230619_1882_Aki_TMTPro18x_K_F3 113.82 41.825 276300 214140 231040 258730 260510 265540 266130 268750 306410 304310 363320 366960 366580 325690 351530 366650 439140 422200 255060 196470 239030 257740 268390 268170 269320 275330 312110 307550 370270 368360 373480 339480 362630 370860 419200 400480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 302370000 13359 4225 12641 25644;25645 20600 20600 1 9606 Homo sapiens 0.10103042285152242 ILLWDTR Unmodified 915.5178 0.51780212 93 A0A024R0H7;Q9BQA1;H0Y711;Q9BQA1-2 WDR77 Methylosome protein 50 yes no 0 0 0 1.5 0.5 1 1 60.513 60.513 2 0.0050427 18835 20230619_1881_Aki_TMTPro18x_K_F2 114.72 83.349 89506 76578 88831 84656 78652 104150 90569 92631 107900 84206 73898 72356 98225 75474 97576 105680 97261 107430 82782 70173 90134 85123 82983 103550 91176 95182 107570 85261 78507 74173 99413 79411 99262 105780 93132 101980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58725000 13360 93 12642 25646;25647 20601;20602 20602 2 9606 Homo sapiens 0.05666392622697458 ILMAAPGMAIPPFIMNTLEK Oxidation (M) 2173.1349 0.13492562 4537 Q9H9B4 SFXN1 Sideroflexin-1 yes yes 0 1 0 5 0 1 65.969 66.012 3 0.016436 20546 20230619_1885_Aki_TMTPro18x_K_F5 47.204 31.612 4959 3802 3604.3 4624.7 4668.1 7626.8 8222.4 4954.4 6075.8 6670.4 5925.3 5721.5 7983.1 6621.5 7551.2 6893.3 7726.3 6247.8 4573.3 3488.7 3803.5 4637.9 4874.9 7416.2 8004.3 5298.5 6309.2 6625 6179.4 5881.8 8060.7 6816.1 7691.1 6890.3 7380.6 5946.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10265000 13361 4537 12643 25648 20603 20603 2807 1 9606 Homo sapiens 0.09528355761358398 ILMAAPGMAIPPFIMNTLEK Unmodified 2157.14 0.140011 4537 Q9H9B4 SFXN1 Sideroflexin-1 yes yes 0 0 0 5.5 0.5 1 1 67.044 67.087 3 6.3789E-08 21014 20230619_1885_Aki_TMTPro18x_K_F5 108.56 91.069 4789.2 5063.8 6334.1 6409.8 5389.1 6169.1 7643.6 7559.6 7912.3 7135.4 6221.1 8378.7 9214.8 7452.9 8358 8997.1 8381.5 8290.9 4448.3 4643.2 6294.1 6361.8 5728.3 6287.2 7583.8 7616.4 7980.1 7271.1 6610.9 8413.5 9267.2 7799.5 8518.4 8976 8018.5 7882.5 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 16380000 13362 4537 12643 25649;25650 20604 20604 1 9606 Homo sapiens 0.10772659623944492 ILMDKPEMNVVLK Unmodified 1528.8357 0.83570714 2933 P55786;E9PLK3;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B3KU93;A0A8V8TQ95;B7Z1H4;B7Z1V9;B3KTP2 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 1 2 0 1 60.223 60.235 3 0.00012984 18734 20230619_1881_Aki_TMTPro18x_K_F2 102.28 65.752 138480 125410 146600 144920 104730 140860 144830 138210 148450 185670 180110 171070 186670 161610 168480 205190 198940 217860 128200 114950 147640 144760 113320 142660 143910 142680 152450 184600 183530 174050 189480 169360 173530 206080 190190 206720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66495000 13363 2933 12644 25651 20605 20605 1 9606 Homo sapiens 0.09244270981776026 ILMEHIHK Unmodified 1019.5586 0.55862107 1679 J3QR09;J3KTE4;Q53G49;A0A7I2YQG2;P84098;Q8IWR8 RPL19 Ribosomal protein L19;60S ribosomal protein L19 yes no 0 0 0 4.5 3.5 1 1 43.509 43.514 4 0.0010046 11632 20230619_1880_Aki_TMTPro18x_K_F1 127.56 74.395 767560 793020 912470 765730 876920 835090 1022400 862010 738930 788520 628480 470430 628170 521810 472810 455760 448910 313850 712020 725420 913390 777490 915160 840710 1013600 877050 765180 790970 649030 493690 633520 533240 482050 451450 428810 300100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 957650000 13364 1679 12645 25652;25653 20606;20607;20608 20606 3 9606 Homo sapiens 0.049624106706801285 ILMEHIHK Oxidation (M) 1035.5535 0.55353569 1679 J3QR09;J3KTE4;Q53G49;A0A7I2YQG2;P84098;Q8IWR8 RPL19 Ribosomal protein L19;60S ribosomal protein L19 yes no 0 1 0 7.5 0.5 1 1 39.472 39.499 4 0.0159 9271 20230619_1888_Aki_TMTPro18x_K_F8 79.474 51.305 998660 879830 1095100 1116700 1212900 735110 1227900 1121900 735250 1195100 1538300 1413300 1139500 1102400 1540500 1009500 1188400 1095400 924610 807240 1105600 1103900 1244400 783000 1222900 1122300 809990 1208600 1523300 1414100 1194600 1141800 1537000 1022800 1139800 1039800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 561760000 13365 1679 12645 25654;25655 20609;20610 20610 1097 2 9606 Homo sapiens 0.03718106808082666 ILMVGLDAAGK Oxidation (M) 1102.6056 0.60563084 258;3472;1931 P84077;A0A024R3Q0;A0A8V8TQC0;A0A8V8TNZ5;P61204;A0A8V8TQP8;A0A024R0Y6;A0A8V8TNZ0;B4DN70;B4DEB9;B4DJC8;F5H423;A0A8V8TP92;B4E190;P61204-2;F5H0C7;A0A8V8TP99;F5H1V1;F8WDB3;F5H6T5;C9J1Z8;A4D0Z3;B4DLJ3;P84085;P18085;C9JPM4 ARF1;ARF3;ARF4;ARF5 ADP-ribosylation factor 1;ADP-ribosylation factor 3;ADP-ribosylation factor 5;ADP-ribosylation factor 4 no no 0 1 0 3 2.92 2 1 1 59.489 59.507 2;3 1.1349E-05 18129 20230619_1880_Aki_TMTPro18x_K_F1 130.94 85.779 95719 75753 88027 97367 98759 91930 97462 100430 106510 99929 111480 113950 115190 97652 111190 129610 107660 124710 88432 69540 90251 96488 101580 93612 98655 102020 108190 101430 114340 114550 117240 102940 113060 129400 103160 118440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87617000 13366 258;1931;3472 12646 25656;25657;25658;25659 20611;20612;20613 20612 150 3 9606 Homo sapiens 0.058432254311583165 ILMVGLDAAGK Unmodified 1086.6107 0.61071622 258;3472;1931 P84077;A0A024R3Q0;A0A8V8TQC0;A0A8V8TNZ5;P61204;A0A8V8TQP8;A0A024R0Y6;A0A8V8TNZ0;B4DN70;B4DEB9;B4DJC8;F5H423;A0A8V8TP92;B4E190;P61204-2;F5H0C7;A0A8V8TP99;F5H1V1;F8WDB3;F5H6T5;C9J1Z8;A4D0Z3;B4DLJ3;P84085;P18085;C9JPM4 ARF1;ARF3;ARF4;ARF5 ADP-ribosylation factor 1;ADP-ribosylation factor 3;ADP-ribosylation factor 5;ADP-ribosylation factor 4 no no 0 0 0 1.5 0.5 2 2 62.337 62.342 2;3 5.1451E-06 19652 20230619_1881_Aki_TMTPro18x_K_F2 180.8 134.78 1065100 909650 972980 1018700 782750 999520 1029300 946310 1044000 1334600 1243800 1282700 1379000 1138700 1184000 1511700 1368800 1570000 984460 833670 993630 1019900 835830 1011000 1024300 981180 1072100 1325900 1272900 1299600 1393700 1199500 1219500 1515300 1309300 1489800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1249300000 13367 258;1931;3472 12646 25660;25661;25662;25663 20614;20615;20616 20615 3 9606 Homo sapiens 0.07087529293767147 ILNDDTALK Unmodified 1001.5393 0.53932542 3653 P54727;B4DEA3;Q53F10;B7Z4W4;B7ZA74;Q5W0S5;Q5W0S4 RAD23B UV excision repair protein RAD23 homolog B yes no 0 0 0 4.5 0.5 1 1 52.013 52.062 2 9.1393E-06 14917 20230619_1883_Aki_TMTPro18x_K_F4 200.07 113.98 451470 337810 419420 461210 579470 651700 772190 745490 891650 601680 688010 713460 698870 567260 631530 733810 732040 698650 416990 310370 431710 458130 594550 646380 770360 751000 892260 619530 716130 714570 709750 598730 649470 732500 699210 664070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1082900000 13368 3653 12647 25664;25665 20617;20618 20617 2 9606 Homo sapiens 0.03861732860752909 ILNDLSSDAPGVPR Unmodified 1452.7573 0.75725712 3460 Q53X93;P16220;P16220-1;Q5U0J5;P16220-3;C9J896;Q4ZG78;C9JBT4;B7Z5C6;B7Z7P1;E7EWP8;C9J4L5;H7C3I0 CREB1 Cyclic AMP-responsive element-binding protein 1 yes no 0 0 0 5.67 0.471 1 2 57.829 57.893 2;3 1.627E-08 17225 20230619_1886_Aki_TMTPro18x_K_F6 171.26 139.5 78611 58924 72704 80763 94885 100070 103100 89993 124110 87770 110090 96146 99541 93009 104090 114620 103870 96025 72606 54140 74741 79989 97019 99488 104050 92606 124530 89181 113070 97243 102200 97109 105810 113780 99327 91430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72289000 13369 3460 12648 25666;25667;25668 20619;20620 20620 2 9606 Homo sapiens 0.04898877992559392 ILNDVQDR Unmodified 971.50361 0.50360861 724;3204 Q13838-2;A0A024RCM3;Q13838;A0A0G2JJZ9;B4DP52;H0Y400;O00148;B4DX78;Q69YT6 DDX39B;hCG_2005638;DDX39A;DKFZp547B159 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A no no 0 0 0 3 0 1 44.663 44.736 2 0.0016199 11702 20230619_1882_Aki_TMTPro18x_K_F3 139.74 102.9 245790 165290 203460 265170 250280 341130 289790 266440 415750 317010 344510 401230 399770 331290 321910 395740 403110 426620 226700 152230 211410 260270 258160 337150 293550 278810 413260 320550 359520 401000 402610 347470 333600 398160 385080 404800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 436660000 13370 724;3204 12649 25669 20621 20621 1 9606 Homo sapiens 0.016716954037633514 ILNGHSLTR Unmodified 1009.5669 0.56687757 2831 D3DVQ1;O95202;O95202-2;O95202-3 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes no 0 0 0 3 0 1 38.291 38.345 3 0.054914 8897 20230619_1882_Aki_TMTPro18x_K_F3 55.649 21.462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13371 2831 12650 25670 20622 20622 1 9606 Homo sapiens 0.062476809116560617 ILNHSVDK Unmodified 924.50288 0.50288033 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 0 7.5 0.5 1 1 39.986 40.013 3 0.00039919 9255 20230619_1887_Aki_TMTPro18x_K_F7 143.03 0 267130 151920 212240 254020 226120 320570 249200 241590 411730 260820 305120 332450 346310 298390 205180 293210 426580 417300 246110 140110 220710 248720 235440 316940 254800 252860 405450 265210 319770 332990 345760 308800 223790 301390 405940 395080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196830000 13372 1005 12651 25671;25672 20623 20623 1 9606 Homo sapiens 0.037609007547075635 ILNIFGVIK Unmodified 1015.643 0.64300263 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 6.5 0.5 1 1 64.935 64.97 2 1.682E-10 20311 20230619_1886_Aki_TMTPro18x_K_F6 165.52 40.434 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13373 1817 12652 25673;25674 20624;20625 20624 2 9606 Homo sapiens 0.1358068475909704 ILNPEEIEK Unmodified 1083.5812 0.58119023 1051 Q05DH1;A0A0K0K1K4;O14818;H0Y586;O14818-2 PSMA7 Proteasome subunit alpha type;Proteasome subunit alpha type-7 yes no 0 0 0 3 0.816 1 1 1 54.742 54.769 2;3 8.5127E-07 16252 20230619_1882_Aki_TMTPro18x_K_F3 145.84 97.042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13374 1051 12653 25675;25676;25677 20626;20627;20628 20627 3 9606 Homo sapiens 0.042742885492771165 ILNVPQELYEK Unmodified 1344.7289 0.7289171 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 7 0 1 61.602 61.641 3 0.001408 18510 20230619_1887_Aki_TMTPro18x_K_F7 98.156 82.266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13375 3833 12654 25678 20629 20629 1 9606 Homo sapiens 0.07034180083269348 ILPDSGGVAK Unmodified 955.53385 0.53384611 1957 A5YKK6;A5YKK6-2;A5YKK6-3;A5YKK6-4;B4DTM8 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 7 0 1 49.512 49.596 2 0.0035929 13420 20230619_1887_Aki_TMTPro18x_K_F7 111.06 85.324 41006 36132 41900 43210 40753 51271 48489 46634 57621 52131 60323 60781 62520 56576 53730 67125 68443 63256 37943 33131 42492 43165 42685 51114 48726 48115 58264 52676 61856 61195 63358 59026 55674 67034 65308 60141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21139000 13376 1957 12655 25679 20630 20630 1 9606 Homo sapiens 0.0543005406894963 ILPEAHQR Unmodified 962.52976 0.52976379 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32 VARS Valine--tRNA ligase yes no 0 0 0 5.5 1.12 1 1 1 1 34.486 34.551 3 4.4373E-06 7357 20230619_1885_Aki_TMTPro18x_K_F5 172.15 109.43 181080 128940 151420 148130 181860 185200 179390 174100 219280 193920 225630 219280 223780 187690 204690 219370 242490 201140 167080 118280 156700 148560 186430 184280 182240 179140 221300 195750 231060 220440 227560 196280 210630 218910 231360 191390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 530010000 13377 725 12656 25680;25681;25682;25683 20631;20632;20633 20632 3 9606 Homo sapiens 0.04700009365888036 ILPEEITNLR Unmodified 1196.6765 0.6764876 1188 A0A140VJN3;Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes no 0 0 0 6 0 1 58.897 58.962 3 0.043565 17686 20230619_1886_Aki_TMTPro18x_K_F6 46.73 35.972 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13378 1188 12657 25684 20634 20634 1 9606 Homo sapiens 0.08601641740301602 ILPEIIPILEEGLR Unmodified 1603.9549 0.95489429 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 7 0 2 67.249 67.271 2;3 1.4766E-05 21023 20230619_1887_Aki_TMTPro18x_K_F7 115.35 97.514 23719 19039 18794 22379 18424 13100 22500 23201 20067 21814 26067 23039 26161 23340 23230 28239 26319 27123 21892 17461 19508 22218 19219 14208 22386 22976 20821 22142 26447 23373 26564 24319 23872 28222 25157 25771 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46946000 13379 2863 12658 25685;25686 20635;20636 20636 2 9606 Homo sapiens 0.17707504202508062 ILPEYLSNWTMEK Unmodified 1622.8014 0.80143012 1627 O95831;O95831-3;A0A6Q8PFM5;A0A6Q8PG15;A0A6Q8PFE1;A0A7I2PK44;A0A6Q8PHJ9;A0A6Q8PHC0;A0A6Q8PFA7;A0A6Q8PFS4;A0A6Q8PFQ8;A0A7I2RLJ8;O95831-2;E9PMA0;A0A6Q8PFW2;A0A6Q8PHJ4 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 0 1 0 1 64.101 64.101 3 0.00043542 20164 20230619_1880_Aki_TMTPro18x_K_F1 92.856 82.379 9461.7 9135.8 9271.7 9850.2 9292.7 9341.7 8236.8 8894.1 10928 12070 11027 11436 12716 11574 11797 11646 12936 12469 8757.3 8366.4 9434.6 9886.2 9620.9 9482.8 8456.1 9202.1 10997 12009 11386 11637 12886 11938 12073 11750 12363 11836 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26804000 13380 1627 12659 25687 20637 20637 1 9606 Homo sapiens 0.01494146094523785 ILPGNMK Unmodified 771.4313 0.43129529 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62;A0A6Q8PGI8 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 49.807 49.874 2 0.076151 14424 20230619_1881_Aki_TMTPro18x_K_F2 79.454 48.785 213880 171470 201570 209800 226910 268190 235560 225520 298540 219240 223180 243620 222720 187270 236100 243010 240470 246000 197650 157320 206240 209470 234180 265740 238870 233190 297350 222830 232700 244270 227990 197970 240130 243460 230080 233600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178910000 13381 1637 12660 25688;25689 20638 20638 1 9606 Homo sapiens 0.03643689796490435 ILPGNMK Oxidation (M) 787.42621 0.42620992 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62;A0A6Q8PGI8 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 1 0 7 0 1 40.405 40.473 3 0.055629 9446 20230619_1887_Aki_TMTPro18x_K_F7 50.039 18.105 148540 97547 139500 154970 174190 192600 171890 178160 215270 175460 216770 179690 194160 171580 174730 153000 226650 205630 137110 89838 143090 152180 178220 191480 174780 182890 216720 177710 221050 182030 198040 176350 180750 157090 216210 194830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32165000 13382 1637 12660 25690 20639;20640 20639 1061 2 9606 Homo sapiens 0.023993859338816037 ILPKPTR Unmodified 823.52797 0.52797287 3703 P62081;B5MCP9;A0A2R8Y623 RPS7 40S ribosomal protein S7 yes no 0 0 1 5 0.816 1 1 1 40.821 40.895 3 0.041134 9888 20230619_1886_Aki_TMTPro18x_K_F6 69.176 56.122 3265800 2517500 2863200 3110400 3256500 4073900 3615000 3228600 4740200 3291000 3636800 3193200 3334600 2574800 3124400 3548700 3502700 2441700 3015600 2310300 2950400 3104200 3367600 4025700 3656500 3359200 4715900 3323600 3766600 3227600 3402000 2727100 3203700 3487900 3340300 2334700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2525200000 13383 3703 12661 25691;25692;25693 20641;20642 20642 2 9606 Homo sapiens 0.10915000347949899 ILPQYIFNSR Unmodified 1249.6819 0.68190733 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 0 5.5 0.5 1 1 61.469 61.521 2 4.2726E-05 18779 20230619_1886_Aki_TMTPro18x_K_F6 148.69 91.227 263040 237670 262300 277980 239940 316240 275560 282250 300180 295420 280650 248090 295350 238940 300050 333390 304340 282600 243380 217870 266330 277940 252360 316000 276630 291010 303720 296460 289370 253940 301130 251810 305450 330570 291000 269030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 426790000 13384 817 12662 25694;25695 20643;20644 20644 2 9606 Homo sapiens 0.06705365322773105 ILPTLEAVAALGNK Unmodified 1408.829 0.8289655 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63;X6R6Z1 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 3.5 0.5 1 1 64.925 64.946 3 1.0439E-11 20516 20230619_1882_Aki_TMTPro18x_K_F3 176.32 155.89 234190 213150 227900 229880 199210 227350 249410 259160 256980 289340 272330 271340 307850 239840 273620 299710 262000 300880 216650 195240 231630 230920 210560 230890 248910 263310 262190 290120 280250 275210 311230 251740 278360 300210 251060 285630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 595200000 13385 2621 12663 25696;25697 20645;20646 20645 2 9606 Homo sapiens 0.14090417417060053 ILPTPETVPFR Unmodified 1268.7129 0.71287311 236 A0A024R3C7;Q13315;B4DSP3 ATM Serine-protein kinase ATM yes no 0 0 0 1 0 1 59.307 59.307 2 9.5181E-06 18252 20230619_1880_Aki_TMTPro18x_K_F1 148.52 97.486 36363 34983 33002 35936 35459 41972 37439 41430 46523 35362 39128 37597 40645 33766 44723 43632 40983 44134 33635 32024 33862 36311 36735 41978 37922 42186 46550 36150 40563 37968 41623 35483 45195 43719 39270 41901 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22301000 13386 236 12664 25698 20647 20647 1 9606 Homo sapiens 0.08926518637031222 ILPVAASYSAVTR Unmodified 1346.7558 0.75580056 1724 A0A804HK74;F2Z2B9;B3KRS1;A0A804HI27;A0A804HL95;A0A804HJQ4;A0A804HJS9;Q53EQ3;A0A804HJ08;A0A804HJH7;Q9BSJ2;Q9BSJ2-4;B4DS45;Q9BSJ2-3 TUBGCP2 Gamma-tubulin complex component 2 yes no 0 0 0 4 0 1 56.423 56.431 2 0.0065284 16808 20230619_1883_Aki_TMTPro18x_K_F4 80.102 50.725 30212 29130 29883 32786 30761 35781 35276 32725 38565 35272 37025 32938 37942 32166 40604 35420 40948 38309 27965 26687 30419 32854 32017 35889 35404 33720 39033 35453 38086 33532 38821 33388 41230 35723 39157 36365 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32562000 13387 1724 12665 25699 20648 20648 1 9606 Homo sapiens 0.0962928869444113 ILPVFDEPPNPTNVEESLK Unmodified 2137.0943 0.094300901 4034 Q5HYL6;Q9NYL9;H0YKU1;H0YNJ8 DKFZp686E1899;TMOD3 Tropomodulin-3 yes no 0 0 0 4.67 0.471 1 2 63.854 63.88 3 0.016501 19989 20230619_1883_Aki_TMTPro18x_K_F4 34.274 27.704 4987.6 4782.2 3400.7 5849.2 5057 4200 5229.8 6833.7 6576.9 10220 10251 11129 11471 10156 10544 11015 11584 14038 4604.7 4384.7 3624.9 5797.2 5121.2 4437.5 5308.8 6885.3 6786.7 10164 10404 11218 11626 10558 10799 11222 11091 13293 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93001000 13388 4034 12666 25700;25701;25702 20649;20650 20649 2 9606 Homo sapiens 0.07123752238567249 ILPVGGIK Unmodified 795.52182 0.52182486 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0;K7ERR6 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 3.5 0.5 1 1 55.943 55.983 2 0.0011537 16655 20230619_1883_Aki_TMTPro18x_K_F4 132.94 26.18 240580 201950 236540 244160 251900 260160 266340 253400 282280 263020 279110 263080 298620 229960 288500 289480 294570 290920 222470 185230 240880 243360 260660 261790 268220 259650 286550 265330 287310 266070 303500 241580 293880 290030 281750 276310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156420000 13389 2417 12667 25703;25704 20651;20652 20652 2 9606 Homo sapiens 0.11588482116417254 ILPVLGSQTGK Unmodified 1111.6601 0.66010926 4690 Q9UNI6 DUSP12 Dual specificity protein phosphatase 12 yes yes 0 0 0 4 0 1 57.72 57.723 3 0.00033605 17409 20230619_1883_Aki_TMTPro18x_K_F4 99.568 81.533 26896 22526 26416 25024 26359 30219 27875 28919 40029 25928 31632 29091 31803 24489 31765 31188 29902 32559 24870 20644 26866 25148 27457 30135 28393 29549 39701 26490 32840 29258 32434 25780 32197 31312 28646 30900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86569000 13390 4690 12668 25705 20653 20653 1 9606 Homo sapiens 0.10874560574234238 ILQACGGNSLGSYSASQGVNCIR Unmodified 2411.1322 0.13217652 408 A0A024R6R2;Q8TD30-2;Q8TD30;H3BU54 GPT2 Alanine aminotransferase 2 yes no 0 0 0 4 0 1 54.55 54.565 3 0.0011508 16056 20230619_1883_Aki_TMTPro18x_K_F4 70.315 54.373 23663 20650 26153 26915 26277 29370 27093 28489 28520 32655 36217 36194 34418 32829 31741 38770 42475 45605 21909 18952 26366 26698 27300 29490 27334 29274 29296 32878 36717 36478 35090 34284 32955 39223 40557 43232 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37730000 13391 408 12669 25706 20654 20654 1 9606 Homo sapiens -0.01694428109931323 ILQAVNFPFLVR Unmodified 1415.8289 0.82890592 2295 P22694-4;B4E2L0;P22694-2;P22694-9;P22694-6;P22694-7;P22694-5;P22694;P22694-3;B2RB89;A0A087WVC4;B7ZA00;B1APG1;B1APF7;B1APF9;B1APF8;B1APG2;B1APG3;P22694-8;B1APG0 PRKACB cAMP-dependent protein kinase catalytic subunit beta yes no 0 0 0 8 0 1 65.123 65.143 2 1.0175E-07 19996 20230619_1888_Aki_TMTPro18x_K_F8 166.16 53.22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13392 2295 12670 25707 20655 20655 1 9606 Homo sapiens 0.13762462207728277 ILQDGGLQVVEK Unmodified 1297.7242 0.72416608 1334 O43175;A0A286YF22;A0A2C9F2M7;A0A286YFA2;A0A286YFL2;A0A286YFM8;A0A286YFB2;A0A286YFC8;A0A286YER3;A0A286YF34;A0A286YFK5;A0A286YFF3 PHGDH D-3-phosphoglycerate dehydrogenase yes no 0 0 0 6 0.816 1 1 1 57.588 57.649 3 1.9104E-07 16849 20230619_1887_Aki_TMTPro18x_K_F7 162.93 113.51 288960 236730 244620 264000 236160 318260 247710 243420 306920 316900 367990 444560 356920 320350 404890 372790 363380 466650 266860 216990 252200 265090 246960 315930 251040 255920 311750 320210 374840 440990 366930 337280 408440 379120 348800 441860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7955299999.999999 13393 1334 12671 25708;25709;25710 20656;20657;20658 20658 3 9606 Homo sapiens 0.08721295940540585 ILQDSLGGNCR Unmodified 1231.5979 0.5979197 2727;1036 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;Q6P164;Q66K46;Q2TA90;A0A7I2YQB4;O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;A0A7I2V581;Q57Z91;O60282-2;A0A7I2V3V4;Q6PKD1;Q6PJC4 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12;KIF5C Kinesin-1 heavy chain;Kinesin-like protein;Kinesin heavy chain isoform 5C no no 0 0 0 6.5 0.5 1 1 47.806 47.891 2 1.3395E-16 12573 20230619_1887_Aki_TMTPro18x_K_F7 261.16 195.09 483420 376060 440300 494550 406000 448300 500190 483850 526630 532540 541130 553860 616130 485340 459120 633550 617630 584040 446540 345320 450680 489070 427000 457630 499760 493330 535720 536160 557740 559120 618860 510830 479320 630990 589180 555370 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 405860000 13394 2727;1036 12672 25711;25712 20659;20660;20661 20660 3 9606 Homo sapiens -0.008615338364279523 ILQEAWTEGR Unmodified 1201.6091 0.60913632 2898;4664 E7ERK9;Q9UI10;Q9Y3W7;Q9UI10-3;Q9UI10-2;Q71US4 EIF2B4;DKFZp586J0119 Translation initiation factor eIF-2B subunit delta no no 0 0 0 4.5 0.5 1 1 55.459 55.497 2 0.00073632 16451 20230619_1883_Aki_TMTPro18x_K_F4 118.03 75.007 90550 70559 84390 99842 85093 92970 94646 95008 102750 113930 104320 109670 122020 102090 110890 132180 128090 130440 83657 64844 86340 98295 88593 94566 95147 97445 104380 113970 107780 111280 123450 107170 114020 132180 122400 123910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137080000 13395 2898;4664 12673 25713;25714 20662 20662 1 9606 Homo sapiens 0.016396115293673574 ILQEDPTNTAAR Unmodified 1327.6732 0.67319314 2045 Q53HG5;A8K4K9;Q15006;H0YAS9 EMC2 ER membrane protein complex subunit 2 yes no 0 0 0 4 0 1 43.847 43.891 2 0.00020324 11274 20230619_1883_Aki_TMTPro18x_K_F4 116.75 92.952 25835 20108 27984 31184 39092 34368 31477 31493 41321 44411 45495 50423 49442 42477 37499 49794 51585 51681 23898 18500 28421 30605 39463 34460 32487 32719 41742 44373 46670 50623 49782 44462 39186 49992 49220 49066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65735000 13396 2045 12674 25715 20663 20663 1 9606 Homo sapiens 0.02246346895685747 ILQEGVDPK Unmodified 997.54441 0.5444108 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 3.5 0.5 1 1 49.661 49.696 3 0.00075069 13827 20230619_1883_Aki_TMTPro18x_K_F4 104.39 68.061 198510 165340 187550 204890 278040 274470 270580 266780 350390 248080 299160 309260 311290 276560 274460 358240 362850 347360 183490 151690 192900 204570 281320 272140 275550 272530 350050 253810 309910 310300 315790 290550 285070 357820 346210 330090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 367720000 13397 2908 12675 25716;25717 20664;20665 20665 2 9606 Homo sapiens 0.04554036723379795 ILQEHEQIK Unmodified 1136.619 0.61897272 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 4.5 0.5 1 1 42.601 42.664 3 0.00073772 10696 20230619_1883_Aki_TMTPro18x_K_F4 104.82 60.515 371140 287090 347560 368200 401940 437750 424710 437570 554950 476170 539190 492930 552150 452720 453980 651540 594130 539390 342880 263560 355990 366100 414020 437350 430900 447940 557070 479870 554050 498900 558500 478720 472190 644660 566730 513700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 710910000 13398 3152 12676 25718;25719 20666;20667 20666 2 9606 Homo sapiens 0.056127995347424076 ILQEHEQIKK Unmodified 1264.7139 0.71393574 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 7 0 1 41.345 41.416 4 0.0018824 9874 20230619_1887_Aki_TMTPro18x_K_F7 90.685 50.096 33729 26377 34327 32559 30526 34263 33542 32145 47517 39378 46471 33563 41133 29463 35208 37985 38333 40057 31184 24205 34751 32404 32117 34472 34084 33182 47531 39256 47390 34243 41829 31016 36096 38140 36658 38018 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45318000 13399 3152 12677 25720 20668 20668 1 9606 Homo sapiens 0.0921673300592829 ILQGGVGIPHIR Unmodified 1258.751 0.75098995 1563 P48729-2;P48729;U3KPX3;A0A590UJ43;V9HW00;P48729-3;A0A5F9W493;Q6PJ06;Q05DL3;A0A590UK94;E5RG27;D6RGE5;A0A590UJQ7 CSNK1A1;HEL-S-77p Casein kinase I isoform alpha yes no 0 0 0 4.5 0.5 1 1 50.93 50.983 3 2.1579E-07 14169 20230619_1885_Aki_TMTPro18x_K_F5 162 118.79 84517 74287 90234 95388 78210 99325 93602 93500 110470 112620 102210 96463 111450 93372 101210 120920 111680 116160 78230 68167 91054 94642 82706 99971 94031 96433 111310 112320 105620 98589 112970 97898 103790 120740 106790 110370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 333960000 13400 1563 12678 25721;25722 20669;20670 20670 2 9606 Homo sapiens 0.13196449342353844 ILQHSHGIEEER Unmodified 1446.7215 0.72154031 1584 A0A8Q3SIN5;D3DVA5;V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;B4DJ49;B7Z977 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 0 0 0 2.5 0.5 1 1 33.227 33.292 4 0.00018837 6998 20230619_1881_Aki_TMTPro18x_K_F2 107.65 84.767 25840 12704 26158 27350 31844 27786 25590 23453 34688 29918 32346 35829 34304 31319 28361 29763 38565 37623 23836 11772 26624 26393 32417 27962 26447 24450 34730 30089 33398 35925 34692 32372 29513 30374 36794 35655 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37376000 13401 1584 12679 25723;25724 20671 20671 1 9606 Homo sapiens 0.0160484053556047 ILQLCMGNHELYMR 2 Oxidation (M) 1808.8372 0.83718047 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;J7M2B1;Q9UK20;Q9UJZ6;Q9UJZ8;Q9UJZ2;Q9UJU1;Q9UJZ7 EZR;HEL-S-105;EZR-ROS1;VIL2 Ezrin;Tyrosine-protein kinase receptor yes no 0 2 0 1 0 1 49.298 49.298 3 0.0053363 14068 20230619_1880_Aki_TMTPro18x_K_F1 67.927 49.789 44454 39316 36687 47292 55103 51880 52613 54938 53912 44996 56110 43795 50398 40577 46543 56510 47357 47496 41067 36053 38249 47159 55651 52207 53226 55638 54899 45977 57131 44497 51414 42803 47499 55998 45304 45207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121190000 13402 3456 12680 25725 20672 20672 2105;2106 1 9606 Homo sapiens -0.03488462991731467 ILQLCMGNHELYMR Oxidation (M) 1792.8423 0.84226585 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;J7M2B1;Q9UK20;Q9UJZ6;Q9UJZ8;Q9UJZ2;Q9UJU1;Q9UJZ7 EZR;HEL-S-105;EZR-ROS1;VIL2 Ezrin;Tyrosine-protein kinase receptor yes no 0 1 0 2 0 1 52.598 52.631 3 1.2329E-05 15588 20230619_1881_Aki_TMTPro18x_K_F2 112.15 102.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13403 3456 12680 25726 20673 20673 2105;2106 1 9606 Homo sapiens -0.022441591291453733 ILQNEPLPER Unmodified 1207.6561 0.65608651 2084 A8K622;Q59F99;O95793-2;O95793-3;O95793;Q5JW30;Q6PJX3;Q5JW28;F6UDC6 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes no 0 0 0 4 0 1 48.263 48.303 2 0.00011151 13135 20230619_1883_Aki_TMTPro18x_K_F4 142.43 72.16 95541 89280 99373 96599 131740 159040 124480 124150 156930 137700 130000 106600 122620 116450 113460 132410 140080 128740 88451 81773 101130 97785 134230 155260 126890 129510 156960 137600 134150 110040 125070 120620 117110 132550 133690 122360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 359400000 13404 2084 12681 25727 20674 20674 1 9606 Homo sapiens 0.060564710805238064 ILQVSFK Unmodified 833.50109 0.50108942 3938 Q15717;Q15717-2 ELAVL1 ELAV-like protein 1 yes no 0 0 0 4.5 0.5 1 1 58.493 58.522 2 0.0036291 17715 20230619_1883_Aki_TMTPro18x_K_F4 153.73 53.66 393810 350290 353610 392860 400570 512440 452210 464100 544760 157220 136570 83164 120640 89883 287920 147670 142130 84501 364040 321000 363630 394850 414510 507770 455480 469170 532180 173830 158660 88530 131590 95583 281000 144390 136990 81140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 382130000 13405 3938 12682 25728;25729 20675 20675 1 9606 Homo sapiens 0.07767891736762067 ILREEGPK Unmodified 940.53418 0.53418046 4002 Q53GR7;Q9UJS0;Q9UJS0-2;B7Z2E2 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes no 0 0 1 6 0 1 39.304 39.392 3 0.001003 9259 20230619_1886_Aki_TMTPro18x_K_F6 123.86 81.549 166470 151350 163870 153130 216610 184120 179370 187440 221480 212090 219450 183900 278680 195500 165770 248380 236260 179900 154020 138560 167320 155040 219450 184150 184360 191820 223300 212220 227440 188600 276930 204190 174870 244710 224980 171800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142420000 13406 4002 12683 25730 20676 20676 1 9606 Homo sapiens 0.0615347378881097 ILRPGGCLFLK Unmodified 1272.7376 0.73764807 4103 Q6FI81-3;Q6FI81;H3BV90;H3BT65;H3BUG4;B4DHB9;H3BPG7;H3BQ23 CIAPIN1 Anamorsin yes no 0 0 1 7.5 0.5 1 1 55.783 55.845 3 0.00082059 16085 20230619_1887_Aki_TMTPro18x_K_F7 94.692 26.035 425090 309030 350860 367120 318690 410190 418110 412860 499110 329960 270290 189960 247040 184360 302510 247740 229020 139270 392230 283560 362300 366640 336980 411420 418130 419300 494250 333970 286670 199260 255350 193790 302250 242110 219210 133760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 210270000 13407 4103 12684 25731;25732 20677;20678 20677 2 9606 Homo sapiens 0.11218875238751025 ILRPWQSSETR Unmodified 1371.7259 0.72589741 322 Q15637-6;A0A024R566;B4DJU4;Q15637;Q15637-2;Q15637-3;Q15637-4;A0A024R572;A0A024R588;A0A024R5D9;B4DSE4;Q15637-5;A0A7P0T9U7;Q15637-7;B4DX42 SF1 Splicing factor 1 yes no 0 0 1 4 0.816 1 1 1 43.816 43.881 3 0.00028071 11181 20230619_1883_Aki_TMTPro18x_K_F4 110.64 74.693 338900 272280 305080 347170 317350 362590 348080 362540 393510 273220 240960 206890 244460 210520 294380 297360 269290 186150 313080 249920 313180 344620 329700 365410 350560 367960 391970 279110 254490 213480 251850 221500 297080 291240 257320 178290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 700250000 13408 322 12685 25733;25734;25735 20679;20680 20680 2 9606 Homo sapiens 0.05490349749129564 ILSAENIPNLPPGGGLAGK Unmodified 1817.0047 0.0046980325 3314 O75688-2;B8ZZF0;C9JIR6;A0A3B3IS24;A8K599;Q4J6C0;B3KP90;O75688-4;O75688;O75688-3 PPM1B Protein phosphatase 1B yes no 0 0 0 2 0 1 61.86 61.87 3 0.0077601 19375 20230619_1881_Aki_TMTPro18x_K_F2 61.87 41.207 68181 57329 66145 75115 72045 87749 73650 85061 102220 67915 63005 54813 63828 56865 65195 63173 71667 61212 63040 52625 67513 74545 74531 87671 75051 86580 100870 69232 66475 56350 65228 58926 66611 63287 68435 58198 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47093000 13409 3314 12686 25736 20681 20681 1 9606 Homo sapiens 0.12887587140471624 ILSCGELIPK Unmodified 1128.6213 0.62128091 1663 A0A7I2V4F2;A0A7I2V629;Q2NKQ6;E9PG73;A0A7I2V5Q5;Q13427;Q32LZ0;C9JM79;Q13427-2;C9JN15;Q6P432 PPIG Peptidyl-prolyl cis-trans isomerase G;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 8 0 1 58.73 58.772 3 0.0029816 17286 20230619_1888_Aki_TMTPro18x_K_F8 72.643 45.936 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13410 1663 12687 25737 20682 20682 1 9606 Homo sapiens 0.06211511948185944 ILSDDVPIR Unmodified 1026.571 0.5709599 450 A8K1J3;A0A024R7G8;P54725-3;P54725;A0A494C0B4;P54725-2;K7ENJ0;K7ELW1 RAD23A UV excision repair protein RAD23 homolog A yes no 0 0 0 4 0 1 52.305 52.329 2 3.8907E-06 15082 20230619_1883_Aki_TMTPro18x_K_F4 186.33 124.5 188190 130560 158190 200440 127130 187680 178240 170120 194350 220320 231620 249190 255910 227840 216180 253700 254090 272140 173620 120160 163040 196350 136340 190150 177290 176470 198650 220830 237050 250880 258600 237060 222830 255470 242870 258220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236460000 13411 450 12688 25738 20683 20683 1 9606 Homo sapiens 0.05873725614696923 ILSDDVPIRDYR Unmodified 1460.7623 0.7623425 450 A8K1J3;A0A024R7G8;P54725-3;P54725;A0A494C0B4;P54725-2;K7ENJ0;K7ELW1 RAD23A UV excision repair protein RAD23 homolog A yes no 0 0 1 5.5 0.5 1 1 50.036 50.112 3 3.2018E-05 13804 20230619_1885_Aki_TMTPro18x_K_F5 121.21 107.3 265950 254700 250370 254460 238400 246710 261260 264320 278190 269850 287400 241460 278950 235520 282410 284660 293030 278020 246060 233100 255440 257110 249080 250670 262730 268970 282800 271560 293810 246440 285120 245780 287710 284910 280170 264190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 420340000 13412 450 12689 25739;25740 20684 20684 1 9606 Homo sapiens 0.050391818551588585 ILSDEDKPLFGPLPCR Unmodified 1855.9502 0.95021962 2647 B4E215;Q8IWV8-4;Q8IWV8 UBR2 E3 ubiquitin-protein ligase UBR2 yes no 0 0 1 8 0 1 59.785 59.822 3 0.024493 17741 20230619_1888_Aki_TMTPro18x_K_F8 55.885 43.118 26060 22053 25900 26792 26252 26122 24773 26453 29152 24943 28476 22336 24624 19063 30903 24135 26348 26808 24101 20228 26326 26665 27184 26484 25216 26961 29408 25214 29051 22707 25533 20058 31025 24342 25257 25432 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7621100 13413 2647 12690 25741 20685 20685 1 9606 Homo sapiens 0.05648251997422449 ILSEEGRR Unmodified 958.51959 0.51959303 1565 A0A590UJB6;A0A590UJJ4;Q13303-3;A0A5F9UN28;Q13303-5;Q13303;Q13303-4;Q13303-2;A8K1X9;A1PR14;B2R615;B2R776;Q6FG44 KCNAB2 Voltage-gated potassium channel subunit beta-2 yes no 0 0 1 4 0 1 33.241 33.298 3 0.00065265 6849 20230619_1883_Aki_TMTPro18x_K_F4 118.74 45.954 80900 56854 81058 70750 80675 77421 81513 80966 98580 91876 120320 109120 101220 99603 102190 83926 121080 110530 74742 52199 82239 70438 83779 77899 82712 82763 100250 92809 121510 109670 104050 102200 104830 86157 115590 104740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33623000 13414 1565 12691 25742 20686 20686 1 9606 Homo sapiens 0.038674016406730516 ILSGPFVQK Unmodified 987.57532 0.57531699 3488 Q3B7A7;Q59HH3;P22102;B4DJ93;A0A140TA71 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 4 0 1 57.579 57.583 3 0.00020983 17333 20230619_1883_Aki_TMTPro18x_K_F4 124.98 83.004 69992 57442 61385 64030 58254 78476 72130 65576 75611 82645 78250 79996 89088 72367 77759 96156 75420 85868 64655 52650 63064 64322 61255 77945 72026 68351 76991 82532 80650 81084 90008 76162 79249 95617 72256 81629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86253000 13415 3488 12692 25743 20687 20687 1 9606 Homo sapiens 0.08103234828274708 ILSGVVTK Unmodified 815.51165 0.5116541 3713 P62280;M0QZC5 RPS11 40S ribosomal protein S11 yes no 0 0 0 3.2 0.748 1 2 2 53.752 53.787 2;3 0.0021324 15671 20230619_1883_Aki_TMTPro18x_K_F4 96.668 44.186 402000 310690 347850 370460 356130 396050 421660 391870 461170 441990 469260 409590 527950 374320 385700 561730 501600 450400 371180 285010 358150 369610 371170 398500 422520 402030 467890 443080 483090 416620 529790 397400 402060 554690 478450 429160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2041199999.9999998 13416 3713 12693 25744;25745;25746;25747;25748 20688;20689;20690 20690 3 9606 Homo sapiens 0.09651874391181536 ILSHGGFR Unmodified 885.48209 0.48208531 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 3 0 1 38.633 38.687 2 0.0095886 9059 20230619_1882_Aki_TMTPro18x_K_F3 101.28 59.055 76286 63280 72761 77048 74124 94979 86122 84283 114520 83149 82188 86106 89592 79985 81526 105400 105390 88057 70518 58047 74275 76911 77365 94401 86984 86811 113680 84269 86193 87112 90897 84004 84485 104470 100490 83884 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94526000 13417 2621 12694 25749 20691 20691 1 9606 Homo sapiens 0.03476355165719269 ILSHGGFRK Unmodified 1013.577 0.57704833 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 1 6.5 0.5 1 1 38.795 38.868 4 0.00096195 9053 20230619_1886_Aki_TMTPro18x_K_F6 86.744 24.964 210700 252990 223230 194440 300890 192960 230450 254320 182240 184480 217840 144090 176740 123480 215150 203340 186490 116320 195490 230960 226510 201620 303210 197300 235160 253580 189910 188780 219650 147850 183270 132290 216440 198250 178220 111660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218440000 13418 2621 12695 25750;25751 20692 20692 1 9606 Homo sapiens 0.07080288636905152 ILSHLQQDSLK Unmodified 1280.7089 0.70885036 4627 Q9NY93-2;Q9NY93;Q53HB9;G3V0G3;H7C3E9;F8WDT8 DDX56 Probable ATP-dependent RNA helicase DDX56 yes no 0 0 0 1 0 1 51.055 51.055 3 1.1284E-17 14752 20230619_1880_Aki_TMTPro18x_K_F1 237.49 191.36 101890 93736 94635 112340 112920 141990 120800 121530 134150 107370 93648 86805 102000 82022 94539 119440 104510 88195 94234 85940 97152 112280 116220 140810 121720 125160 134270 108710 98323 88976 103480 86737 96949 117610 99780 84159 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132350000 13419 4627 12696 25752 20693 20693 1 9606 Homo sapiens 0.0797242914331946 ILSHTEEHK Unmodified 1092.5564 0.55637247 4138 Q6Y1H2 HACD2 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 yes yes 0 0 0 4.5 0.5 1 1 34.275 34.344 4 7.5959E-09 7251 20230619_1883_Aki_TMTPro18x_K_F4 211.52 168.28 210070 150390 218990 211770 313810 314590 314880 327500 405490 200580 226970 228510 243520 190030 248290 144020 262220 227550 194160 138250 223130 210180 318320 310550 320000 330110 400180 210710 242060 229330 248210 195070 252540 150510 250520 215370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150930000 13420 4138 12697 25753;25754 20694;20695 20694 2 9606 Homo sapiens 0.013796534665516447 ILSLCPEIK Unmodified 1071.5998 0.59981719 2819 D3DSW3;O94903;E5RG77;A8K520;B3KMP6;E5RFX7;H0YBG2 PROSC Proline synthase co-transcribed bacterial homolog protein yes no 0 0 0 1.5 0.5 1 1 60.957 60.957 3 0.00047567 18853 20230619_1880_Aki_TMTPro18x_K_F1 98.033 49.239 59177 54353 61357 62895 46677 59772 57313 56701 58747 69517 67945 68918 78008 70286 62695 75643 75232 79767 54778 49816 61940 62792 49981 60607 57260 58500 60194 69543 69718 70034 78599 72736 64786 76126 71892 75703 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131010000 13421 2819 12698 25755;25756 20696;20697 20696 2 9606 Homo sapiens 0.06688126919493698 ILSSDDYGK Unmodified 996.47639 0.47639081 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 5 0.816 1 1 1 49.681 49.744 2 6.718E-06 13645 20230619_1885_Aki_TMTPro18x_K_F5 180.45 127.28 169010 134670 156040 161460 199570 205080 208940 205680 276750 238880 262030 281970 268040 230750 216970 290220 311280 305030 156160 123530 160280 161460 204110 204130 212140 210930 277400 241030 269850 282550 271080 242840 227140 291280 296880 289590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 356840000 13422 2337;3778;3779 12699 25757;25758;25759 20698 20698 1 9606 Homo sapiens -0.02198832927285821 ILSVQGTEPLVLFK Unmodified 1542.9021 0.90213044 4534 Q9H8H0;J3QLQ6;Q9H8H0-2 NOL11 Nucleolar protein 11 yes no 0 0 0 3 0 1 64.231 64.263 3 8.2948E-08 20232 20230619_1882_Aki_TMTPro18x_K_F3 144.27 116.52 36687 31549 26722 35881 30693 34662 37350 38618 39164 43546 43367 40089 50401 44157 38530 51318 39534 48961 33858 28917 28094 35865 31772 35240 37328 39307 39992 43635 44573 41022 50653 45791 39520 51287 37882 46494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59629000 13423 4534 12700 25760 20699 20699 1 9606 Homo sapiens 0.1523954613967362 ILTAVPK Unmodified 740.47963 0.47962569 4776 yes no 0 0 0 2.67 0.471 1 2 50.137 50.204 2 0.013271 14223 20230619_1882_Aki_TMTPro18x_K_F3 114.19 0 + 453260 378750 431190 448250 459410 525230 493900 471440 624380 480930 515520 522950 522210 430750 509620 570110 575110 490390 419000 347330 440410 448030 476270 524040 499910 485670 623900 487140 534420 526020 532200 454630 522360 566080 549040 466930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 380920000 13424 4776 12701 25761;25762;25763 20700 20700 1 9606 Homo sapiens 0.09900506708038392 ILTDYGFEGHPFR Unmodified 1550.7518 0.75177781 3307 O75489;Q9UF24 NDUFS3;DKFZp586K0821 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes no 0 0 0 7.5 0.5 1 1 56.197 56.255 3 4.7887E-38 16249 20230619_1887_Aki_TMTPro18x_K_F7 229.95 212.36 122510 94834 108460 118390 117010 123790 125680 123670 150310 116480 124990 111000 145210 126410 120310 135070 130290 140500 113140 87037 111530 117700 121120 124780 126960 126170 150640 118040 130210 113560 146400 130360 123410 135870 124630 133350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342560000 13425 3307 12702 25764;25765 20701;20702 20701 2 9606 Homo sapiens -0.0015680079925459722 ILTFDQLALDSPK Unmodified 1459.7922 0.79224564 32 Q0QEW2;H0YHA7;A0A024QZD1;J3QQ67;Q07020-2;Q07020;G3V203;F8VUA6 RPL18 60S ribosomal protein L18 yes no 0 0 0 5.33 3.09 1 1 1 63.474 63.492 3 7.328E-08 19913 20230619_1880_Aki_TMTPro18x_K_F1 151.7 143.29 910320 838630 964680 963370 719470 920440 871330 977630 840710 1046500 895390 1004100 1345400 833050 930070 1222800 1183500 1136900 842830 768570 971780 962550 771410 935240 869800 996460 862070 1051900 936300 1015500 1337100 886980 968580 1216800 1129600 1080900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 6558899999.999999 13426 32 12703 25766;25767;25768 20703;20704;20705;20706 20704 4 9606 Homo sapiens 0.08074120800506535 ILTGLNYEAPK Unmodified 1217.6656 0.66558856 1481 A0A7D5Q2L7;A0A384NPZ7;Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating yes no 0 0 0 1 0 1 57.923 57.923 3 0.0077163 17651 20230619_1880_Aki_TMTPro18x_K_F1 69.342 43.906 121380 100620 114000 101990 110110 127550 119470 120360 158220 74647 83551 75515 70757 53116 90801 85316 75998 86694 112190 92146 116290 103320 115070 126890 121080 122220 155710 78065 88659 75967 73551 57270 91141 85301 72931 82289 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128890000 13427 1481 12704 25769 20707 20707 1 9606 Homo sapiens 0.06546239366002737 ILTGTDAPK Unmodified 914.5073 0.50729701 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A994J4Z2;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;Q59FZ6;A0A2R8YF80;A0A2R8YGP5;A0A2R8Y7R0 SMARCA4 Transcription activator BRG1 yes no 0 0 0 6.5 0.5 1 1 47.356 47.444 2 1.8415E-10 12784 20230619_1886_Aki_TMTPro18x_K_F6 179.68 104.57 87620 61994 88858 91585 99724 104470 96490 93491 121590 109810 119770 112990 119750 113570 100330 110540 139940 118060 80961 57024 90331 90193 102630 104390 98258 96714 122350 110260 122900 114590 121410 116930 104590 111540 133360 112140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112120000 13428 1348 12705 25770;25771 20708;20709 20708 2 9606 Homo sapiens 0.04662365177614447 ILTHVAEMQGK Unmodified 1225.6489 0.64889264 151 Q9UH99-2;Q9UH99;B4E2A6;A0A024R1P7;A0A8I5QKM0;B4DIU6;Q9UH99-3;B0QY60;A8K129;B0QY64;Q6NT72 SUN2;UNC84B SUN domain-containing protein 2 yes no 0 0 0 1 0 1 49.298 49.298 3 6.2126E-05 14063 20230619_1880_Aki_TMTPro18x_K_F1 127.52 105.51 75248 58548 71204 77938 72909 79189 93180 83950 99565 88833 98130 90557 108090 86415 102650 104730 95564 101240 69528 53769 72748 77127 76125 80084 92941 85596 100970 89593 101150 91778 109690 90268 104100 104760 91543 96175 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 283800000 13429 151 12706 25772 20710 20710 1 9606 Homo sapiens 0.04509415208417522 ILTHVAEMQGK Oxidation (M) 1241.6438 0.64380726 151 Q9UH99-2;Q9UH99;B4E2A6;A0A024R1P7;A0A8I5QKM0;B4DIU6;Q9UH99-3;B0QY60;A8K129;B0QY64;Q6NT72 SUN2;UNC84B SUN domain-containing protein 2 yes no 0 1 0 8 0 1 43.833 43.848 3 0.024742 11058 20230619_1888_Aki_TMTPro18x_K_F8 52.391 28.009 63604 48267 63800 73529 73391 81790 77951 74478 90740 83084 88557 86347 102680 84552 81367 103660 104230 99182 58788 44401 65004 72241 75610 81880 78714 76838 91629 83642 91547 87500 103340 88295 84496 103550 99469 94270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39096000 13430 151 12706 25773 20711 20711 84 1 9606 Homo sapiens 0.03265111345785954 ILTLGEVPK Unmodified 968.59063 0.59063271 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8;E5RIW1 XPO7 Exportin-7 yes no 0 0 0 4.5 3.5 1 1 59.183 59.204 2 1.5352E-08 18150 20230619_1880_Aki_TMTPro18x_K_F1 212.58 153.6 169140 146510 152080 172950 153960 174150 168750 167210 177220 192210 213910 212070 223740 196100 186030 251110 241230 251150 156330 134330 156060 172510 160230 175870 169620 172020 181590 193500 218140 213970 226330 205680 193240 251250 230340 238510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 185600000 13431 2083 12707 25774;25775 20712;20713 20712 2 9606 Homo sapiens 0.10508101625475774 ILTNWGHPEYTCIYR Unmodified 1921.9145 0.91450282 151 Q9UH99-2;Q9UH99;B4E2A6;A0A024R1P7;A0A8I5QKM0;B4DIU6;A8K129;B0QY64;Q6NT72 SUN2;UNC84B SUN domain-containing protein 2 yes no 0 0 0 2.5 0.5 1 1 56.448 56.476 3 3.8202000000000003E-42 16959 20230619_1882_Aki_TMTPro18x_K_F3 275.42 266.63 47662 37294 41411 43483 45090 51340 60703 55726 60877 55341 52569 54465 57725 50967 53306 59338 58343 56844 44012 34203 42672 43525 46972 51417 60272 56615 61670 55929 54576 55214 58562 53122 54593 59344 55763 54022 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113520000 13432 151 12708 25776;25777 20714 20714 1 9606 Homo sapiens -0.009577854595590907 ILTPIIFK Unmodified 943.61064 0.61063987 1684 Q8NBL6;G5E9W7;H7C5L9;A0A8I5KYF1;A0A8I5KSY5;A0A7P0MKV3;P82650;A0A8I5KX02;Q59GX8 MRPS22 28S ribosomal protein S22, mitochondrial yes no 0 0 0 6 0 1 63.359 63.407 2 0.00062583 19643 20230619_1886_Aki_TMTPro18x_K_F6 126.67 59.985 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13433 1684 12709 25778 20715 20715 1 9606 Homo sapiens 0.13657897356085869 ILTPLVSLDTPGK Unmodified 1352.7915 0.79151736 2121 B4DX01;A8K8F0;Q9HC38-2;Q9Y3E8;Q9HC38;B3KV49;B7Z403;I3L1I0 GLOD4 Glyoxalase domain-containing protein 4 yes no 0 0 0 2 0 1 63.023 63.032 3 1.8102E-12 19975 20230619_1881_Aki_TMTPro18x_K_F2 162.49 145.95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13434 2121 12710 25779 20716 20716 1 9606 Homo sapiens 0.1292332615144005 ILTTEGR Unmodified 788.43922 0.43921744 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 4 0.816 1 1 1 39.867 39.93 2 0.023296 9464 20230619_1885_Aki_TMTPro18x_K_F5 100.75 23.922 751900 471440 673990 775560 894750 893380 813550 828850 954740 884870 1065200 1013000 1116900 902210 880220 790730 1171600 1072600 693650 434480 694940 759200 909350 892780 829450 852710 968900 895370 1089300 1018500 1126800 929070 914690 812590 1117500 1016100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 701500000 13435 3811 12711 25780;25781;25782 20717 20717 1 9606 Homo sapiens 0.03653540317623083 ILTTNTWSSELSK Unmodified 1478.7617 0.76167379 3284 O60701;O60701-3;O60701-2;Q9NQ81 UGDH;GDH UDP-glucose 6-dehydrogenase yes no 0 0 0 1.5 0.5 1 1 60.54 60.545 3 3.3368E-08 18701 20230619_1880_Aki_TMTPro18x_K_F1 131.32 109.41 56830 46110 53532 56637 55491 70321 61052 56430 68510 56607 52649 53987 58500 47275 62766 65929 52927 51851 52521 42305 54715 56501 57717 69728 61451 58626 68728 57157 55055 54718 59702 49964 63226 65162 50728 49402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185220000 13436 3284 12712 25783;25784 20718 20718 1 9606 Homo sapiens 0.04144342415497704 ILTTSEDSNAQEIK Unmodified 1547.7679 0.76788138 2669 B5MDU6;Q9H6V9;Q9H6V9-2;B5MCE2;B4DRG3 LDAH;C2orf43;FLJ21820 UPF0554 protein C2orf43 yes no 0 0 0 4 0 1 50.355 50.387 3 0.00084802 14189 20230619_1883_Aki_TMTPro18x_K_F4 83.53 63.692 72299 53404 67431 68290 72740 72549 74384 72411 94166 98007 109940 108850 112200 102250 92401 129430 110540 116690 66775 49035 68976 67806 75160 73062 75532 74676 95457 98018 112120 109840 113560 107070 95520 128810 105630 110950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56924000 13437 2669 12713 25785 20719 20719 1 9606 Homo sapiens 0.01590815856343397 ILVAEGTR Unmodified 857.49707 0.49706667 239 P10515;A0A024R3D8;Q86YI5;A0A7P0TBE2;A0A7P0TAX2;A0A7P0TAG1;B4DJX1;A0A7P0T997;A0A7P0Z4G4;E9PEJ4;Q16791;A0A7P0Z423;A0A7P0Z459;A0A7P0T9N8 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial;Acetyltransferase component of pyruvate dehydrogenase complex yes no 0 0 0 5 0.816 1 1 1 43.535 43.608 2 0.025055 11085 20230619_1886_Aki_TMTPro18x_K_F6 84.498 55.122 114730 109460 118820 110530 168530 158530 169580 148150 154920 119560 129840 145840 157140 124680 153870 140640 172180 146580 106230 100190 121060 112260 170830 156540 170370 151320 157600 123220 135770 146140 159330 130180 157440 141460 164380 139250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 472900000 13438 239 12714 25786;25787;25788 20720 20720 1 9606 Homo sapiens 0.06261802243034253 ILVAQGGLGGK Unmodified 1011.6077 0.60767976 1934 C9J8R7;C9JNI1;A4D1E9 GTPBP10 GTP-binding protein 10 yes no 0 0 0 3 0 1 53.007 53.066 2 0.022757 15511 20230619_1882_Aki_TMTPro18x_K_F3 90.709 70.932 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13439 1934 12715 25789 20721 20721 1 9606 Homo sapiens 0.10234022231304607 ILVATNLFGR Unmodified 1102.6499 0.64987892 724;3204 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;H0Y400;O00148;B4DX78;Q69YT6 DDX39B;hCG_2005638;DDX39A;DKFZp547B159 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A no no 0 0 0 6.5 0.5 1 1 62.258 62.302 2 7.7177E-10 18846 20230619_1887_Aki_TMTPro18x_K_F7 212.2 166.17 2500400 2053900 2152100 2650100 2301700 2724500 2687300 2735300 3048600 2270200 2206500 1995100 2228500 1935400 2498900 2339700 2357600 2179300 2309400 1885200 2220800 2627600 2391800 2748700 2697700 2781400 3049500 2312300 2304100 2037400 2287200 2019700 2527500 2336500 2255900 2072300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2221800000 13440 724;3204 12716 25790;25791 20722;20723 20723 2 9606 Homo sapiens 0.10265997639635316 ILVAVVK Unmodified 740.51601 0.5160112 1088 A0A0S2Z489;O00232-2;O00232;A0A0S2Z476 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 3 0 1 57.541 57.574 2 0.022747 17423 20230619_1882_Aki_TMTPro18x_K_F3 91.26 40.358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13441 1088 12717 25792 20724 20724 1 9606 Homo sapiens 0.1353738360475063 ILVDQVTGISR Unmodified 1199.6874 0.68738664 945 A0A0A0MRX1;Q12926-2;Q12926;B1AM48;C9JB16 ELAVL2 ELAV-like protein;ELAV-like protein 2 yes no 0 0 0 1 0 1 55.466 55.466 2 2.1955E-06 16623 20230619_1880_Aki_TMTPro18x_K_F1 178.46 137.43 286330 252670 269980 337240 194070 191610 178850 175560 189150 314550 313310 277560 303300 257670 268500 330120 329130 316190 264770 231940 274730 331580 207070 204590 181930 184520 197610 309120 314900 282850 308200 270320 277330 329610 314230 300520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1148900000 13442 945 12718 25793 20725 20725 1 9606 Homo sapiens 0.09553044114591103 ILVDQVTGVSR Unmodified 1185.6717 0.67173657 1058;3893 Q96J71;Q14576;Q14576-2;P26378-4;A0A494C0F8;P26378;P26378-3;P26378-1;P26378-5;P26378-2;A0A494C147;B1APY9;A0A494C1D9;A0A0R4J2E6;B7Z5E0;A0A494C015;A0A494C173 ELAVL3;ELAVL4 ELAV-like protein;ELAV-like protein 3;ELAV-like protein 4 no no 0 0 0 1 0 1 52.762 52.762 2 0.00018628 15505 20230619_1880_Aki_TMTPro18x_K_F1 150.1 120.77 89574 82334 95629 117750 71000 81712 95035 94399 99183 108470 107790 111510 119640 104270 107160 121220 109760 137940 82937 75629 96404 115480 76336 85631 94611 96018 101200 108930 110740 112820 121140 108720 109420 122440 105190 130740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 525080000 13443 3893;1058 12719 25794 20726 20726 1 9606 Homo sapiens 0.08632757597570162 ILVDVEK Unmodified 814.48002 0.48001963 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 5 0 1 54.261 54.331 2 0.048383 15552 20230619_1885_Aki_TMTPro18x_K_F5 86.953 7.3565 154470 136060 148680 180410 162660 215300 200240 199060 256280 247850 282300 312560 313530 270320 255260 339580 351410 415100 142860 124890 152000 178930 169230 214570 201420 205790 258890 249890 289920 312970 316350 283970 266390 344040 335740 393230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 961400000 13444 3432 12720 25795 20727 20727 1 9606 Homo sapiens 0.06535881637239527 ILVENPSAR Unmodified 997.55564 0.55564418 2586 E7EPP6;B4DT73;O14757-2;O14757;O14757-3;E9PPA5 CHEK1 Serine/threonine-protein kinase Chk1 yes no 0 0 0 6 0 1 43.85 43.942 2 0.037076 11208 20230619_1886_Aki_TMTPro18x_K_F6 68.625 16.143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13445 2586 12721 25796 20728 20728 1 9606 Homo sapiens 0.05676858817514585 ILVGSLEK Unmodified 857.52222 0.52221879 403 P51003;A0A024R6M3;B4DHB8;B4DYF4;G3XAH6;Q9NRJ5;A4D1Z6;A0A024R6J7;A0ZTA0 PAPOLA;PAPOLB;TPAP Poly(A) polymerase alpha;Poly(A) polymerase beta yes no 0 0 0 8 0 1 55.339 55.402 2 0.00065724 15905 20230619_1888_Aki_TMTPro18x_K_F8 159.04 67.413 72421 62262 67139 75015 80373 78995 75355 67888 84492 97235 91798 80705 97130 82324 82308 96653 89084 90057 66947 57100 68872 74753 82244 79371 76551 70928 85952 96203 93988 82756 98250 85637 84411 96494 85176 85603 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19306000 13446 403 12722 25797 20729 20729 1 9606 Homo sapiens 0.08775857045600333 ILVGTNLVR Unmodified 983.61277 0.61276513 4389 Q96QK1;Q53FR4;Q5HYM2 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 4.5 0.5 1 1 53.421 53.466 2 0.00042536 15587 20230619_1883_Aki_TMTPro18x_K_F4 136.27 82.917 600890 473560 524940 633910 1249000 657250 642780 613570 740900 671030 684540 707850 674060 929400 736830 765200 742840 792450 554910 434910 550010 627050 1218400 663830 686060 631600 747910 676830 704950 724430 693740 941120 748670 773320 711030 752200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1017999999.9999999 13447 4389 12723 25798;25799 20730 20730 1 9606 Homo sapiens 0.12030326093884014 ILVPEGTR Unmodified 883.51272 0.51271674 239 P10515;A0A024R3D8;Q86YI5;A0A7P0TBE2;A0A7P0TAX2;A0A7P0TAG1;B4DJX1;A0A7P0TBK2;A0A7P0T997;A0A7P0Z4G4;H0YDD4;A0A7P0TA47;B4DS43;Q16791 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial;Acetyltransferase component of pyruvate dehydrogenase complex yes no 0 0 0 5 0 1 45.164 45.242 2 0.037218 11734 20230619_1885_Aki_TMTPro18x_K_F5 75.854 57.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13448 239 12724 25800 20731 20731 1 9606 Homo sapiens 0.06630088760095987 ILVTGGSGLVGK Unmodified 1099.6601 0.66010926 1246 A0A140VKC8;Q13630;E9PKL9;E9PLH9;B3KU96;B4DZW9;E9PP14;A0A0J9YX13;E9PP60 TSTA3 GDP-L-fucose synthase yes no 0 0 0 4 0 1 56.195 56.203 2 1.2454E-11 16736 20230619_1883_Aki_TMTPro18x_K_F4 192.12 129.46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13449 1246 12725 25801 20732 20732 1 9606 Homo sapiens 0.11426560574250288 ILVTLLHTLER Unmodified 1306.7973 0.79727144 2058 A8K4W5;Q59GW6;Q9BWD1;Q9BWD1-2 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes no 0 0 0 5 0 1 64.493 64.538 3 4.1373E-05 19947 20230619_1885_Aki_TMTPro18x_K_F5 133.89 90.647 28440 27712 30232 32473 20229 26158 25736 29647 34185 34726 31528 30566 35023 29615 32391 33181 34717 33848 26342 25397 30425 32332 21991 27009 25919 30180 34255 34694 32619 31182 35509 30777 33115 33325 33188 32145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47724000 13450 2058 12726 25802 20733 20733 1 9606 Homo sapiens 0.15614469453771562 ILVVHLK Unmodified 820.55346 0.55345934 218 H7C189;Q53H56;A0A024R2X6;Q53FJ3;Q08AK7;A1LPW7;Q13107-2;Q13107 USP4 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 4 yes no 0 0 0 4 0 1 51.152 51.18 3 0.012569 14521 20230619_1883_Aki_TMTPro18x_K_F4 87.989 82.163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13451 218 12727 25803 20734 20734 1 9606 Homo sapiens 0.13600474870372636 ILWHTMK Unmodified 927.50004 0.50004356 3613 P49792;A0A8V8TLN4;A0A8V8TLA0;A0A8V8TL79;A0A8V8TMX6;Q5JC45;Q5JC46 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 5 0 1 49.799 49.876 3 0.0039571 13695 20230619_1885_Aki_TMTPro18x_K_F5 107.43 70.409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13452 3613 12728 25804 20735 20735 1 9606 Homo sapiens 0.03339354096192437 ILYESQR Unmodified 907.47633 0.47633123 96 Q59EI3;B2R8A9;A0A024R0K3;Q6ZSA3;F5H5P2;P12694;P12694-2;H0YH31;Q658P7 BCKDHA;DKFZp313C0640 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial yes no 0 0 0 6 0 1 42.108 42.202 2 0.019836 10448 20230619_1886_Aki_TMTPro18x_K_F6 105.39 68.804 47141 37425 48118 54275 58199 58496 61456 56025 72466 50401 57474 54338 50400 49043 53395 56760 65827 50691 43589 34401 48987 53458 59701 58771 62084 57281 72520 51407 59353 54835 51872 51129 54942 56575 62758 48266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32247000 13453 96 12729 25805 20736 20736 1 9606 Homo sapiens 0.01889211863374385 ILYLTPEQEK Unmodified 1232.6653 0.66525421 2699 B7Z7P8;P62495-2;P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 6.5 0.5 1 1 57.353 57.417 2 9.7437E-07 17019 20230619_1886_Aki_TMTPro18x_K_F6 203.35 130.09 79240 62320 76724 80617 74977 88464 79429 81438 89985 111840 98401 97370 118630 91580 94891 119990 104770 109200 73234 57214 78147 80007 78197 88686 80194 84477 91565 110930 101420 99311 119230 96206 97595 119440 100180 103810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189320000 13454 2699 12730 25806;25807 20737 20737 1 9606 Homo sapiens 0.05822819646186872 ILYMTDEVNNPSLTIK Oxidation (M) 1865.9445 0.94446554 1057 A0A0P0C1B5;Q4GCC3;W8DBX9;Q14XI3 COII;COX2 Cytochrome c oxidase subunit 2 yes no 0 1 0 6 0 1 61.331 61.386 3 0.014986 18703 20230619_1886_Aki_TMTPro18x_K_F6 54.501 34.394 33309 30112 35362 38705 37978 40546 38108 40530 51190 35975 36625 37775 43054 35274 49382 44902 42190 41464 30836 27629 35808 38403 39249 40860 38820 41284 50792 36688 38573 38203 44029 36978 49681 44793 40431 39422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41082000 13455 1057 12731 25808 20738 20738 617 1 9606 Homo sapiens 0.046131086951163525 ILYSFATAFR Unmodified 1187.6339 0.63389451 4729 Q9Y3P9;Q9Y3P9-2;Q9Y3P9-3 RABGAP1 Rab GTPase-activating protein 1 yes no 0 0 0 8 0 1 64.199 64.219 2 0.0025048 19616 20230619_1888_Aki_TMTPro18x_K_F8 121.64 100.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13456 4729 12732 25809 20739 20739 1 9606 Homo sapiens 0.04758291402731629 ILYSQCGDVMR Oxidation (M) 1356.6166 0.61660624 2989 F8W1R7;P60660-2;P60660;G3V1V0;B7Z6Z4;J3KND3;G8JLA2;F8VPF3;B4E368;A0A8Q3SIC5;A0A024RB31;P14649;F8W1I5;A0A8Q3SI90 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B yes no 0 1 0 6 0 1 44.968 45.057 2 0.0060454 11727 20230619_1886_Aki_TMTPro18x_K_F6 78.759 63.786 75598 59596 63983 69384 79709 82941 89356 82155 85985 82407 84333 76730 84291 73987 79675 96721 81550 73264 69799 54654 66239 69458 81766 82844 89400 83993 87727 83105 86566 78130 85825 77568 81298 95479 77951 69866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231050000 13457 2989 12733 25810 20740 20740 1769 1 9606 Homo sapiens -0.04743740256890305 ILYSQCGDVMR Unmodified 1340.6217 0.62169161 2989 F8W1R7;P60660-2;P60660;G3V1V0;B7Z6Z4;J3KND3;G8JLA2;F8VPF3;B4E368;A0A8Q3SIC5;A0A024RB31;P14649;F8W1I5;A0A8Q3SI90 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B yes no 0 0 0 7.5 0.5 1 1 50.07 50.149 2 6.9303E-12 13583 20230619_1888_Aki_TMTPro18x_K_F8 201.61 190.9 277930 236430 261800 258250 222170 314070 297670 289050 312700 354240 297890 304160 358860 275020 309700 372140 325110 327830 256930 216640 266780 259860 236480 312680 296260 298690 317470 352930 309070 310040 361790 289920 316990 369740 310930 311840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 327980000 13458 2989 12733 25811;25812 20741;20742 20742 2 9606 Homo sapiens -0.034994363942814743 ILYYIFTK Unmodified 1059.6005 0.60046911 302 A0A0G2JNN3;A0A024R4R9;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 LENG8 Leukocyte receptor cluster member 8 yes no 0 0 0 7 0 1 65.205 65.232 3 0.066866 20213 20230619_1887_Aki_TMTPro18x_K_F7 46.426 22.869 4584.8 5840.6 5678.3 6443.4 5573.2 6712.9 5726.3 6748.8 7510.4 7923.6 8069.9 9079 8120.6 6982.9 8138.2 8025.9 7085.3 7923.7 4262.6 5345.7 5680.8 6462.6 5805.7 6769.3 5824.7 6921.3 7575.7 7977.4 8263 9087.5 8285.3 7325.6 8216.9 8044.6 6795.2 7524 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8190000 13459 302 12734 25813 20743 20743 1 9606 Homo sapiens 0.07305289630835432 IMATPEQVGK Oxidation (M) 1088.5536 0.55359527 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 0 1 0 6.5 0.5 1 1 43.917 44.004 2 0.00014939 11227 20230619_1886_Aki_TMTPro18x_K_F6 138.08 91.654 173540 139690 153750 170570 211080 215380 205900 194390 256220 199680 260120 253510 233240 209930 227620 254720 278170 263030 160300 128160 158790 170290 214550 213960 209380 200210 258050 203290 265470 253570 238760 220270 234500 255640 265560 249800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 579460000 13460 150 12735 25814;25815 20744 20744 80 1 9606 Homo sapiens 0.012860620174024007 IMATPEQVGK Unmodified 1072.5587 0.55868065 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 0 0 0 7 0.816 2 2 2 48.719 48.798 2;3 3.154E-06 13391 20230619_1886_Aki_TMTPro18x_K_F6 169.21 125.96 286350 239590 264770 268500 298320 326070 319470 281280 360660 337390 363360 361730 391360 314530 341500 402780 382370 358120 264650 219600 271290 269600 307830 324420 322070 292050 365180 338830 373880 364630 396070 330660 350720 400690 365280 340710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1133500000 13461 150 12735 25816;25817;25818;25819;25820;25821 20745;20746;20747 20745 3 9606 Homo sapiens 0.02530365880033969 IMDCVGCFK Unmodified 1128.4766 0.47660728 4359 Q96HE7;G3V2H0 ERO1L ERO1-like protein alpha yes no 0 0 0 1 0 1 57.391 57.391 3 0.032969 17449 20230619_1880_Aki_TMTPro18x_K_F1 56.258 38.394 29086 25936 33891 28786 24381 31324 32099 28739 38198 40047 34748 35156 35910 32503 35530 40519 39966 42857 26947 23764 33859 28891 26312 31424 32113 29847 38452 39723 35872 35812 36616 34042 36410 40703 38216 40670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51105000 13462 4359 12736 25822 20748 20748 1 9606 Homo sapiens -0.0824919579492871 IMDPNIVGSEHYDVAR Oxidation (M) 1830.857 0.85704752 3391 Q0QEN7;V9HW31;P06576;H0YH81 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 1 0 3.5 0.5 1 1 46.072 46.133 3 2.3554E-09 12377 20230619_1882_Aki_TMTPro18x_K_F3 144.33 117.79 160580 121950 145290 174490 177830 187300 174430 172640 199260 197820 211400 213130 202790 171270 187750 206420 228490 250200 148300 112100 149520 171970 182030 188070 176840 178080 202110 199040 215950 214230 206550 179990 193540 209240 218380 237100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 239130000 13463 3391 12737 25823;25824 20749;20750 20749 2000 2 9606 Homo sapiens -0.025146724557998823 IMDPNIVGSEHYDVAR Unmodified 1814.8621 0.8621329 3391 Q0QEN7;V9HW31;P06576;H0YH81 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 4.5 0.5 1 1 50.663 50.717 3 6.3331E-16 14287 20230619_1883_Aki_TMTPro18x_K_F4 193.64 151.43 244000 209230 257910 277650 243390 304310 293830 291820 296190 322380 312350 348170 342710 277130 304110 355110 391120 374650 225800 192080 260810 275080 255490 305280 293480 299830 302450 324840 321310 349760 346970 292420 314990 356530 373270 355690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 676490000 13464 3391 12737 25825;25826 20751;20752 20751 2 9606 Homo sapiens -0.012703685931910513 IMDQAANPQYVWDR Unmodified 1705.7882 0.78823967 1818 Q7Z460;Q7Z460-3;Q7Z460-5;Q7Z460-4;Q7Z460-2;A0A8V8TLP7;F8WA11;A0A8V8TQK9;A0A8V8TRF6 CLASP1 CLIP-associating protein 1 yes no 0 0 0 6 0 1 57.4 57.472 2 0.0011633 17062 20230619_1886_Aki_TMTPro18x_K_F6 97.911 84.005 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13465 1818 12738 25827 20753 20753 1 9606 Homo sapiens -0.036422919648657626 IMDQTLK Unmodified 847.44734 0.44733929 3083;2862 P09493-3;D9YZV5;P09493-4;Q15657;P09493-10;A0A0K0K1I0;P09493-8;Q8TCG4;H0YKX5;H0YL42;H7BYY1;B7Z596;F5H7S3;Q1ZYL5 TPM1 Tropomyosin alpha-1 chain no no 0 0 0 7 0 1 49.538 49.622 2 0.0056963 13410 20230619_1887_Aki_TMTPro18x_K_F7 138.83 55.031 234460 190580 204080 258680 490370 654240 518550 480620 760190 406500 409580 426310 480800 370060 380690 487790 495640 448830 216550 175030 214860 260470 488810 627010 527670 500610 745710 416360 439800 430170 483740 389920 395780 485800 472790 426890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182130000 13466 2862;3083 12739 25828 20754 20754 1 9606 Homo sapiens 0.01751351242739929 IMEAMEK Unmodified 850.39286 0.39286088 4700 Q9Y237;Q9Y237-2;H0Y4T6;J3KMW3;H0Y610;H0Y8P6;A0A494C021;Q9Y237-3;A8E0G8 PIN4;PAR14 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 yes no 0 0 0 4.5 0.5 1 1 52.124 52.172 2 0.058351 14703 20230619_1885_Aki_TMTPro18x_K_F5 86.794 40.423 98072 69841 86862 87385 93837 107310 91436 97272 112940 138630 146470 162390 175500 141830 118070 182800 186670 181010 90526 64122 89273 87073 96947 106760 93058 101140 115330 138580 150000 163080 175470 149160 125210 182740 177900 171960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104400000 13467 4700 12740 25829;25830 20755 20755 1 9606 Homo sapiens -0.038319839003293055 IMEFTTTLLNTSPEGWK Unmodified 1966.971 0.97101464 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2.5 0.5 1 1 65.648 65.669 3 3.3516E-14 20809 20230619_1882_Aki_TMTPro18x_K_F3 166.9 147.58 27558 21885 24703 21849 20406 28425 27246 28990 25888 33245 31228 28121 32083 29679 28614 32672 32820 32858 25455 20042 25258 22179 21765 28252 27051 29669 26696 33201 31807 28842 32568 30719 29412 32786 31362 31206 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28306000 13468 3758 12741 25831;25832 20756 20756 1 9606 Homo sapiens 0.026207975864281252 IMEGPAFNFLDAPAVR Unmodified 1746.8763 0.8763264 1402 A0A384MDR8;P11177-3;P11177-2;P11177 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes no 0 0 0 1 0 1 63.852 63.852 3 8.9597E-06 20085 20230619_1880_Aki_TMTPro18x_K_F1 104.94 83.693 13278 12746 13550 13122 14463 14097 12521 16704 14039 16201 15086 14914 17520 14143 14703 14961 18857 19426 12293 11668 13748 13247 14885 14252 12803 16854 14279 16350 15533 15170 17668 14672 15230 15270 18006 18401 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16575000 13469 1402 12742 25833 20757 20757 1 9606 Homo sapiens 0.032763286257477375 IMEGPAFNFLDAPAVR Oxidation (M) 1762.8712 0.87124102 1402 A0A384MDR8;P11177-3;P11177-2;P11177 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes no 0 1 0 7.5 0.5 1 1 62.455 62.486 3 0.0078539 18950 20230619_1887_Aki_TMTPro18x_K_F7 63.462 54.16 73968 60243 63010 73933 63424 66971 75263 63818 81437 72541 80696 71616 79365 66829 93719 79774 83055 96981 68311 55270 64991 73440 66164 68199 75367 65710 82545 72847 82753 72630 81708 69821 94386 80958 79666 91880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132050000 13470 1402 12742 25834;25835 20758 20758 872 1 9606 Homo sapiens 0.020320247631389066 IMEIVDAITTTAQSHQR Unmodified 1912.9677 0.9676606 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 2 0 1 63.925 63.934 3 1.2883E-48 20363 20230619_1881_Aki_TMTPro18x_K_F2 285.43 11.938 13419 12279 16293 11991 9872.8 13674 11754 14776 14268 15231 17489 14732 15760 14349 20007 17463 18093 21483 12439 11238 16189 12176 10832 13725 11846 15019 14520 15349 17707 14982 16345 14984 20152 17730 17354 20349 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22262000 13471 116 12743 25836 20759 20759 1 9606 Homo sapiens 0.04769547532418983 IMEYYEK Unmodified 974.44192 0.44191956 3556 Q53Y06;P36543;P36543-3;P36543-2;C9J8H1;A0A140VKA8;Q96A05 ATP6V1E1;ATP6V1E2 V-type proton ATPase subunit E 1;V-type proton ATPase subunit E 2 yes no 0 0 0 6 0 1 53.023 53.1 2 0.043978 15237 20230619_1886_Aki_TMTPro18x_K_F6 88.942 53.062 95583 73915 85261 90553 81729 92915 105810 83845 116880 99566 118700 122470 126760 105820 107410 125630 136640 132980 88274 67825 87464 90114 85862 93576 105570 86802 118420 100540 122070 122750 128210 110760 111270 126290 130420 126240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171050000 13472 3556 12744 25837 20760 20760 1 9606 Homo sapiens -0.046323723397335925 IMGPNYTPGK Oxidation (M) 1092.5274 0.52738052 3447 P13639;Q8TA90;Q6PK56 EEF2 Elongation factor 2 yes no 0 1 0 1.67 0.471 1 2 44.807 44.848 2;3 0.0014126 12069 20230619_1881_Aki_TMTPro18x_K_F2 117.89 89.147 94426 71745 78451 85875 90542 88309 96328 88260 115190 106940 110430 92417 104920 86987 96319 132750 103010 97683 87152 65824 81237 85607 93216 89161 97343 90687 116070 106670 113150 94428 106840 92295 98672 130590 98461 93170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 496990000 13473 3447 12745 25838;25839;25840 20761;20762 20762 2090 2 9606 Homo sapiens -0.015182071540948527 IMGPNYTPGK Unmodified 1076.5325 0.5324659 3447 P13639;Q8TA90;Q6PK56 EEF2 Elongation factor 2 yes no 0 0 0 2 0 1 48.865 48.93 2 7.4695E-06 13918 20230619_1881_Aki_TMTPro18x_K_F2 191.17 119.04 327590 272960 303170 311810 273490 366070 323690 313650 388010 413610 403610 366700 428430 373370 369990 462080 448420 399760 302760 250230 309680 312460 288430 364770 325510 326700 392460 411320 414160 374820 433820 389530 382080 459200 427950 380540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 439720000 13474 3447 12745 25841 20763 20763 1 9606 Homo sapiens -0.002739032914632844 IMGPNYTPGKK Unmodified 1204.6274 0.62742892 3447 P13639;Q8TA90;Q6PK56 EEF2 Elongation factor 2 yes no 0 0 1 4.5 0.5 1 1 45.413 45.474 3 0.0015383 11916 20230619_1883_Aki_TMTPro18x_K_F4 87.667 66.714 541230 475220 504450 497400 493940 566720 546450 537180 642850 545530 501610 446180 532780 433420 518930 519280 608830 473430 500410 435220 515320 501720 515670 567300 550900 550990 643720 548120 522370 457210 542160 452190 532820 517940 580720 450650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 372210000 13475 3447 12746 25842;25843 20764;20765 20764 2 9606 Homo sapiens 0.033300301797225984 IMHDVIK Unmodified 854.46841 0.46840908 1274 P61764-2;P61764;A0A1B0GVQ5;A0A1B0GWF2;B7Z1V5;B7Z3F4;A0A994J7L2;A0A1B0GVV9;A0A1B0GTD8 STXBP1 Syntaxin-binding protein 1 yes no 0 0 0 7 0 1 44.726 44.812 3 0.0070484 11252 20230619_1887_Aki_TMTPro18x_K_F7 100.45 32.029 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13476 1274 12747 25844 20766 20766 1 9606 Homo sapiens 0.03535361342255783 IMHFPTWVDLK Oxidation (M) 1401.7115 0.7114929 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 1 0 3 0 1 59.188 59.217 3 0.001058 18124 20230619_1882_Aki_TMTPro18x_K_F3 87.184 66.231 32670 26323 27275 29839 32959 34202 35810 35528 42800 38703 37791 48154 49767 45510 34110 62500 53063 70849 30165 24132 28257 29912 33866 34297 36146 36288 43017 39244 39589 48378 49717 47925 36171 62900 50710 67139 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18421000 13477 1661 12748 25845 20767 20767 1079 1 9606 Homo sapiens 0.02670561276590888 IMIMTDQDQDGSHIK Unmodified 1730.7968 0.79675545 3433;1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 0 0 4.5 0.5 1 1 50.902 50.955 3 9.149E-09 14427 20230619_1883_Aki_TMTPro18x_K_F4 144.29 125.46 125500 115630 119030 131970 122270 139060 141890 123340 142200 158360 182120 150650 169240 147350 178950 185330 172220 198930 116080 105960 121590 132030 127290 139750 141940 128100 146460 157940 184250 153350 173580 154150 181480 186360 165020 188700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 572090000 13478 1843;3433 12749 25846;25847 20768 20768 1 9606 Homo sapiens -0.03941106110551118 IMLDSSNLQHQK Unmodified 1412.7082 0.70819844 2170 A8QI98;Q9Y2L1;Q49AG4;G3V1J5;Q9Y2L1-2;A0A024R643;B3KM83 DIS3;KIAA1008 Exosome complex exonuclease RRP44 yes no 0 0 0 8 0 1 46.215 46.254 3 1.2055E-05 12010 20230619_1888_Aki_TMTPro18x_K_F8 133.02 109.17 60354 48271 52795 54758 54122 64557 61445 62599 79967 64327 61316 56385 65722 47870 63661 62270 64378 68550 55742 44255 54299 54913 56395 64488 62090 64115 79641 64708 63952 57328 66791 50483 64803 62696 61619 65027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44558000 13479 2170 12750 25848 20769 20769 1 9606 Homo sapiens 0.01835266431976379 IMLEDGNLHVTQGAGR Oxidation (M) 1725.8468 0.84681718 1217 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;B4DLZ4 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 1 0 5 0 1 45.387 45.465 3 3.6321E-08 11846 20230619_1885_Aki_TMTPro18x_K_F5 124.78 111.11 54286 39553 59306 56404 54220 55890 54266 56415 74613 62123 65440 65396 70182 53459 52829 50802 73475 76771 50201 36362 59721 55572 56714 56567 55368 57755 74467 62600 67751 65795 70630 55475 55150 52552 70124 72630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36741000 13480 1217 12751 25849 20770 20770 752 1 9606 Homo sapiens 0.012927646096159151 IMLFTNEDNPHGNDSAK Oxidation (M) 1917.8527 0.85269042 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 1 0 4.5 0.5 1 1 48.706 48.763 3 1.2633E-09 13211 20230619_1885_Aki_TMTPro18x_K_F5 136.99 126.94 216070 201510 228920 276380 263300 263150 294310 252310 265880 260030 280290 273710 280080 228680 318990 300580 273690 334900 200060 185000 232290 272670 271190 266900 293980 258940 273060 262780 287020 275830 287580 241290 321110 302860 262720 317500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 235710000 13481 150 12752 25850;25851 20771;20772 20772 81 2 9606 Homo sapiens -0.0695218166936229 IMLFTNEDNPHGNDSAK Unmodified 1901.8578 0.8577758 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 4.33 0.471 2 1 51.602 51.646 3;4 2.5245E-18 14763 20230619_1883_Aki_TMTPro18x_K_F4 180.74 163.66 149400 142240 176800 163410 161170 188900 184340 181930 211430 202300 201900 195080 228810 175760 209290 196950 200510 237820 138500 130340 177020 163700 169300 188930 185410 186860 213510 203170 208740 197700 231580 183250 212620 199900 192190 225310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 553880000 13482 150 12752 25852;25853;25854 20773;20774 20774 2 9606 Homo sapiens -0.05707877806730721 IMLGDEAALLEQK Unmodified 1429.7487 0.74866627 3143 J3QL54;Q9BW27-3;Q9BW27;J3KT10;Q9BW27-2;J3QLD4;J3QLV0;B7Z3C2;B4DYG7 NUP85 Nuclear pore complex protein Nup85 yes no 0 0 0 5 0 1 62.457 62.504 3 0.0022284 19033 20230619_1885_Aki_TMTPro18x_K_F5 83.137 67.986 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13483 3143 12753 25855 20775 20775 1 9606 Homo sapiens 0.05098188031729478 IMLNTPEDVQALVSGK Oxidation (M) 1729.892 0.89203604 3207 O00231;O00231-2;B4DTS5 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 1 0 8 0 1 62.389 62.414 3 0.00012412 18815 20230619_1888_Aki_TMTPro18x_K_F8 91.355 73.655 98530 83608 93720 94887 98614 119480 106330 99978 120020 121080 121910 127600 132000 117100 131240 137730 123470 141650 91093 76636 95700 95236 102360 118500 107190 104060 121610 121460 125500 128880 134380 122210 133080 138280 118340 134430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 526660000 13484 3207 12754 25856 20776 20776 1886 1 9606 Homo sapiens 0.05628570352132556 IMLPWDPTGK Oxidation (M) 1172.59 0.58998078 3494 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;Q9NQS8;E9PPU1;E9PSF4 RPS3 40S ribosomal protein S3 yes no 0 1 0 1.8 0.748 2 2 1 62.384 62.388 2;3 0.002491 19702 20230619_1881_Aki_TMTPro18x_K_F2 94.309 81.782 326350 286930 311760 318300 326700 365310 363160 370030 386350 401890 399840 374650 440250 339390 343370 441710 385680 399140 301800 262920 318200 319630 339180 366020 364840 378450 393010 403570 411110 380560 443190 356800 353750 439560 368700 379510 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 888950000 13485 3494 12755 25857;25858;25859;25860;25861 20777;20778;20779;20780 20778 2164 4 9606 Homo sapiens 0.010589389140932326 IMLPWDPTGK Unmodified 1156.5951 0.59506616 3494 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;Q9NQS8;E9PPU1;E9PSF4 RPS3 40S ribosomal protein S3 yes no 0 0 0 2.5 0.5 1 1 63.416 63.436 2 6.1156E-06 20153 20230619_1881_Aki_TMTPro18x_K_F2 193.41 169.26 630050 509360 602060 558900 421240 622380 629350 625700 646270 788220 662470 699290 817590 662740 644710 866420 760380 797930 582330 466820 611170 561590 458640 624390 623290 643180 658970 784920 685910 712630 821160 695780 666250 862900 726670 758470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 884320000 13486 3494 12755 25862;25863 20781;20782 20781 2 9606 Homo sapiens 0.023032427767020636 IMMEFER Unmodified 954.43031 0.43030902 303 A0A024R4S0;M0R1T5;O43633;M0R1L7 CHMP2A Charged multivesicular body protein 2a yes no 0 0 0 4 0 1 54.803 54.815 2 0.027683 16143 20230619_1883_Aki_TMTPro18x_K_F4 85.813 53.748 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13487 303 12756 25864 20783 20783 1 9606 Homo sapiens -0.048728926347166635 IMNHEER Unmodified 927.42325 0.4232498 405 H0YLY0;A0A024R6N2;Q9Y5S2;Q86XZ8 CDC42BPB Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK beta yes no 0 0 0 2 0 1 28.219 28.293 3 0.0056045 5088 20230619_1881_Aki_TMTPro18x_K_F2 100.19 76.631 15293 9948.7 15884 18912 17195 18275 17220 18691 15860 13366 16680 22109 17791 16259 18809 7622.7 21258 17348 14128 9186.1 16123 18336 17743 18524 17329 18932 16260 14054 17169 21810 18179 16510 19177 8384.8 20289 16389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8104600 13488 405 12757 25865 20784 20784 1 9606 Homo sapiens -0.04336489190939119 IMNTFSVMPSPK 2 Oxidation (M) 1382.6574 0.65740842 1424;3870;2562;3176 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A1L195;A1L196;Q13885;B2R6L0;A5D907;A5D906;B4DP54;Q9BUF5;B4E386;B3KS31;K7ES63;K7ESM5 TUBB2B;DKFZp566F223;TUBB2A;TUBB6 Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-6 chain no no 0 2 0 2.5 0.5 1 1 50.727 50.788 3 0.00090172 14752 20230619_1881_Aki_TMTPro18x_K_F2 85.845 64.295 79290 67492 76998 82191 116060 96648 93424 89173 106400 77269 90554 88044 83265 72399 88070 88394 92258 82395 73318 61905 78984 81986 116620 96550 95885 91316 106960 79110 93338 88405 85463 76015 89701 88246 88163 78359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149960000 13489 1424;3870;2562;3176 12758 25866;25867 20785 20785 893;894 1 9606 Homo sapiens -0.018613989372397555 IMNTFSVMPSPK Oxidation (M) 1366.6625 0.6624938 1424;3870;2562;3176 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A1L195;A1L196;Q13885;B2R6L0;A5D907;A5D906;B4DP54;Q9BUF5;B4E386;B3KS31;K7ES63;K7ESM5 TUBB2B;DKFZp566F223;TUBB2A;TUBB6 Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-6 chain no no 0 1 0 3.75 0.829 2 1 1 56.886 56.919 2;3 5.5368E-05 16823 20230619_1882_Aki_TMTPro18x_K_F3 114.82 85.128 284590 269060 280780 350390 334090 342780 355170 361530 377950 324440 319200 298560 307170 283790 347370 338050 319150 311510 263380 246870 286760 346980 343120 347660 357550 367080 381320 329150 329750 303920 315940 295980 350920 337430 305580 296180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 586610000 13490 1424;3870;2562;3176 12758 25868;25869;25870;25871 20786;20787;20788;20789 20786 893;894 4 9606 Homo sapiens -0.006170950746309245 IMNTFSVMPSPK Unmodified 1350.6676 0.66757917 1424;3870;2562;3176 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A1L195;A1L196;Q13885;B2R6L0;A5D907;A5D906;B4DP54;Q9BUF5;B4E386;B3KS31;K7ES63;K7ESM5 TUBB2B;DKFZp566F223;TUBB2A;TUBB6 Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-6 chain no no 0 0 0 5 0 1 61.347 61.398 3 2.1616E-05 18492 20230619_1885_Aki_TMTPro18x_K_F5 122.42 107.04 299440 258320 329070 375500 246870 322170 349810 399160 342520 309760 286530 272770 288780 246930 287730 309350 262940 256510 277210 237380 330940 368820 265890 331310 346740 400010 347040 316590 296720 277860 294600 258810 291360 306890 251770 244220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 786130000 13491 1424;3870;2562;3176 12758 25872 20790 20790 1 9606 Homo sapiens 0.006272087879779065 IMNTFSVVPSPK Oxidation (M) 1334.6904 0.69042311 3748;1486;3381;983;3201 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;G3V2A3;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0R2D3;P04350;B4DE77;M0QYM7;M0R042 TUBB3;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 1 0 4.43 0.728 1 2 4 56.921 56.963 3 0.00011154 16476 20230619_1882_Aki_TMTPro18x_K_F3 105.17 85.593 638870 556320 624600 652760 676460 736190 615990 679560 797490 594510 644450 637690 642790 564410 687680 632520 647770 639630 590870 510040 636510 652480 697200 736910 630470 695770 795550 607110 668430 643090 658350 588130 695970 635190 620110 607480 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 4236299999.9999995 13492 983;1486;3748;3201;3381 12759 25873;25874;25875;25876;25877;25878;25879 20791;20792;20793;20794;20795;20796 20791 552 6 9606 Homo sapiens 0.03646551177098445 IMNTFSVVPSPK Unmodified 1318.6955 0.69550848 3748;1486;3381;983;3201 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;G3V2A3;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;M0R2D3;P04350;B4DE77;M0QYM7;M0R042 TUBB3;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 0 0 4 0.816 1 1 1 60.956 60.983 3 6.4934E-07 18806 20230619_1882_Aki_TMTPro18x_K_F3 125.28 84.56 87649 73479 85444 75234 66268 82984 82128 81654 87805 78717 76035 76714 79179 69932 92872 80988 81948 74396 81042 67294 86636 76012 70856 83307 82103 83431 88646 79664 78757 77743 81373 72926 93525 80890 78460 70759 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 25034000000 13493 983;1486;3748;3201;3381 12759 25880;25881;25882 20797;20798 20797 2 9606 Homo sapiens 0.04890855039730013 IMNVIGEPIDER Oxidation (M) 1400.697 0.69696505 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 1 0 2.5 0.5 1 1 51.912 51.965 3 0.00089657 15006 20230619_1882_Aki_TMTPro18x_K_F3 86.592 70.701 53035 49932 54061 50564 62448 80642 65711 57809 100390 47741 61301 62868 51889 46946 58752 59283 56225 59588 49094 45707 54957 51422 64444 78725 67074 60381 98539 49382 64335 62621 53620 49575 59490 59395 53843 56581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83427000 13494 3391 12760 25883;25884 20799 20799 2001 1 9606 Homo sapiens 0.012644443377894277 IMNVIGEPIDER Unmodified 1384.7021 0.70205043 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 4.5 0.5 1 1 58.747 58.776 2 3.8706E-09 17801 20230619_1883_Aki_TMTPro18x_K_F4 209.97 183.01 185270 153570 167140 201030 149790 206790 212020 211630 233330 233650 225320 242700 267130 229220 235560 269900 256990 271480 171190 140980 171320 199140 158990 208640 210810 216470 236230 235230 233520 245500 269840 239040 241470 270570 245780 257780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 579090000 13495 3391 12760 25885;25886 20800 20800 1 9606 Homo sapiens 0.02508748200420996 IMNVIGEPIDERGPIK Unmodified 1779.9553 0.955305 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 1 7 0 1 57.972 58.024 3 0.015694 16997 20230619_1887_Aki_TMTPro18x_K_F7 58.814 45.677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13496 3391 12761 25887 20801 20801 1 9606 Homo sapiens 0.09652555860020584 IMPEDIIINCSK Oxidation (M) 1447.7051 0.70508689 2724 P11387;B9EG90 TOP1 DNA topoisomerase 1 yes no 0 1 0 6.5 0.5 1 1 58.077 58.137 3 9.8884E-05 17252 20230619_1886_Aki_TMTPro18x_K_F6 107.34 91.972 58619 43786 48334 52714 52658 55120 53033 53515 57525 51982 52796 46284 61852 45357 51618 71186 59115 56388 54095 40177 50037 52539 54369 55532 53600 54743 58168 52456 54741 47296 62314 48200 53191 70229 56469 53725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254220000 13497 2724 12762 25888;25889 20802 20802 1633 1 9606 Homo sapiens -0.0008574473704356933 IMPEDIIINCSK Unmodified 1431.7102 0.71017227 2724 P11387;B9EG90 TOP1 DNA topoisomerase 1 yes no 0 0 0 7 0 1 61.347 61.386 2 0.00072058 18391 20230619_1887_Aki_TMTPro18x_K_F7 97.452 70.854 51948 41217 49822 59049 39677 68863 53175 49771 78885 95670 90880 103160 104680 91442 67470 112930 97293 114490 48010 37881 50723 58246 42631 68378 53633 53408 79471 94465 93302 103930 104670 95836 71168 113080 92920 108660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50821000 13498 2724 12762 25890 20803 20803 1 9606 Homo sapiens 0.011585591255652616 IMQEEGQPLKLPDTK Oxidation (M) 1741.892 0.89203604 4319 Q96A33;Q96A33-2 CCDC47 Coiled-coil domain-containing protein 47 yes no 0 1 1 6 0 1 49.809 49.886 3 0.0016102 13859 20230619_1886_Aki_TMTPro18x_K_F6 75.376 53.842 67244 58953 69428 73777 84947 75151 92620 81567 69147 80106 89079 56479 60597 41066 86210 46500 42481 29051 62223 54082 70597 73319 86975 76088 92208 82865 72584 80256 89052 57943 63817 43198 84580 45813 40975 27826 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48393000 13499 4319 12763 25891 20804 20804 2728 1 9606 Homo sapiens 0.050765703521392425 IMQIHSR Oxidation (M) 899.46472 0.46472069 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PM69 PSMC3 26S protease regulatory subunit 6A yes no 0 1 0 5 3 1 1 29.66 29.681 3 0.052137 5642 20230619_1881_Aki_TMTPro18x_K_F2 55.676 8.6091 18462 14070 15291 17096 18743 24245 17222 19858 23946 17457 18691 18772 18323 15059 18948 17842 21042 17905 17040 12911 15863 17106 19205 23862 17663 20514 23787 17826 19411 18873 18744 15805 19365 17894 20091 17017 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31198000 13500 4761 12764 25892;25893 20805;20806 20805 2903 2 9606 Homo sapiens 0.010966915683980005 IMQLLDVPPGEDK Unmodified 1453.7487 0.74866627 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 5 0.816 1 1 1 62.814 62.848 3 0.021542 19516 20230619_1883_Aki_TMTPro18x_K_F4 57.434 44.031 20677 17581 18473 22087 20246 19438 19349 22320 23308 22845 20798 20077 21706 20943 22160 21987 22559 21850 19107 16131 18991 21900 20854 19932 19695 22612 23433 22975 21497 20537 22165 21622 22547 22075 21576 20757 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189480000 13501 4414 12765 25894;25895;25896 20807 20807 1 9606 Homo sapiens 0.03994188031720114 IMQNTDPHSQEYVEHLK Oxidation (M) 2083.9633 0.9633035 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 1 0 4.5 0.5 1 1 42.618 42.681 4 1.4748E-06 10681 20230619_1883_Aki_TMTPro18x_K_F4 116.81 104.17 56803 40312 51615 56411 67841 72578 60368 67506 77910 78096 82612 91585 99816 91403 64546 110540 101320 109210 52441 37056 53132 55838 69008 72037 61862 69564 78609 78789 85302 92386 99731 95261 68542 110560 96638 103710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165510000 13502 12 12766 25897;25898 20808 20808 5 1 9606 Homo sapiens -0.035319616811193555 IMQSSSEVGYDAMAGDFVNMVEK Unmodified 2507.1018 0.10184717 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 5.33 1.7 1 1 1 64.264 64.3 3 1.6093E-53 20035 20230619_1886_Aki_TMTPro18x_K_F6 260.56 251.69 389040 333690 399520 401940 291060 446690 435570 450970 464170 531330 438530 487570 623410 487020 476770 609820 543000 619580 359930 306020 403560 401010 315700 448090 431830 462430 470830 531240 459530 496870 623180 509200 491800 610960 519430 588100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 826620000 13503 272 12767 25899;25900;25901 20809;20810;20811 20810 3 9606 Homo sapiens -0.09141967609957646 IMQSSSEVGYDAMAGDFVNMVEK 2 Oxidation (M) 2539.0917 0.091676418 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 2 0 5 0.816 2 2 2 61.306 61.338 3 8.061E-14 18169 20230619_1885_Aki_TMTPro18x_K_F5 139.7 130.65 106930 81772 100090 126140 122150 109130 122900 115770 133880 125470 133290 119840 135620 102960 128620 143660 123260 142610 98784 75232 102700 123440 124960 111820 124200 118140 135750 126120 136810 121440 137910 108990 130710 143600 118120 135390 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 297040000 13504 272 12767 25902;25903;25904;25905;25906;25907 20812;20813;20814;20815;20816 20813 165;166;167 5 9606 Homo sapiens -0.11630575335220783 IMQSSSEVGYDAMAGDFVNMVEK Oxidation (M) 2523.0968 0.096761796 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 1 0 5.25 0.829 1 1 2 62.717 62.752 3 9.9607E-14 19512 20230619_1883_Aki_TMTPro18x_K_F4 138.66 124.93 101740 102150 133080 127350 104020 120610 137570 117080 143400 143750 159320 154540 160400 128520 142690 168630 152880 184100 94447 93665 132130 126490 111180 122400 136960 120670 146360 144170 162730 155570 162760 135610 146130 169590 146390 174580 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 480710000 13505 272 12767 25908;25909;25910;25911 20817;20818;20819;20820;20821 20817 165;166;167 5 9606 Homo sapiens -0.10386271472589215 IMQSSSEVGYDAMAGDFVNMVEK 3 Oxidation (M) 2555.0866 0.08659104 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 3 0 5 0 1 57.453 57.512 3 0.0010442 16855 20230619_1885_Aki_TMTPro18x_K_F5 69.133 61.329 7363.5 6948.3 5755.1 7301.2 9706.4 9856 8150.8 8974.8 9047.7 8306.3 8326 11222 7448.6 9553.9 10190 9831.8 10175 11684 6803 6362.2 6047.9 7378.2 9725.7 9756.8 8335.2 9208.5 9140.2 8519.7 8564.5 11194 7783.9 9910.2 10312 9981.5 9746 11072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10083000 13506 272 12767 25912 20822 20822 165;166;167 1 9606 Homo sapiens -0.12874879197806877 IMRDPDTGNSK Oxidation (M) 1248.5768 0.57684991 2421 Q53FG6;B3KUJ0;Q15427;Q5SZ64 SF3B4 Splicing factor 3B subunit 4 yes no 0 1 1 4.5 0.5 1 1 33.047 33.116 3 0.060609 6763 20230619_1883_Aki_TMTPro18x_K_F4 50.207 35.006 68137 36321 68656 66178 85801 88076 75572 78114 141120 58648 74089 87166 78945 68979 68190 57021 89177 87174 62871 33550 69930 64622 87574 87130 78754 79967 137090 61368 79435 86518 79973 71139 70617 59225 85107 82486 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41398000 13507 2421 12768 25913;25914 20823 20823 1493 1 9606 Homo sapiens -0.03749543935964539 IMRPDDANVAGNVHGGTILK Unmodified 2077.0739 0.073857005 3205 O00154-4;O00154-6;O00154-7;O00154;O00154-2;O00154-3 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 1 8 0 1 47.11 47.159 4 6.2351E-16 12362 20230619_1888_Aki_TMTPro18x_K_F8 160.13 135.59 106140 89600 93255 116640 78040 89150 102340 100860 94734 112280 101230 121170 130780 109110 108890 122930 122310 132690 98065 82242 95718 115190 82932 92500 101590 102600 97326 113070 105000 122120 131490 113710 111930 123820 116960 125880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 323930000 13508 3205 12769 25915 20824 20824 1 9606 Homo sapiens 0.07840303097736978 IMSCSPDTQCSR Oxidation (M) 1456.5745 0.57448343 4481 Q9C0C9;K7EQ12 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 0 1 0 4 0 1 33.856 33.909 2 0.035361 7107 20230619_1883_Aki_TMTPro18x_K_F4 64.82 64.82 8762.4 7356.6 6632.4 8747.6 9603.5 11166 9206.5 8736.6 10172 8328.5 10177 9295 9621.7 9204.6 8619.6 9367.6 14242 12909 8087.3 6746.4 6973.1 8746.8 9740.1 11051 9332.1 9084.4 10302 8475.6 10411 9394.9 9804 9508 9095.8 9606.1 13563 12228 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6555100 13509 4481 12770 25916 20825 20825 2784 1 9606 Homo sapiens -0.13554083727558464 IMSSPLSK Oxidation (M) 877.4579 0.45790397 3695 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;E5RHH1;J3KSS0 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 1 0 1.5 0.5 1 1 45.112 45.153 2 0.0048751 12175 20230619_1881_Aki_TMTPro18x_K_F2 110.67 67.806 668240 509100 524290 666770 747660 741590 723950 722580 881100 633880 724390 688050 719170 582110 648860 748800 832170 696320 616540 467510 548720 661130 758200 743890 735840 737190 881700 647470 750070 692940 730910 612770 671650 746590 793500 662420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 952910000 13510 3695 12771 25917;25918 20826;20827;20828 20828 2385 3 9606 Homo sapiens 0.014273338971634075 IMSSPLSK Unmodified 861.46299 0.46298935 3695 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;E5RHH1;J3KSS0 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 0 3 0 1 50.942 51.012 2 0.00019257 14578 20230619_1882_Aki_TMTPro18x_K_F3 169.57 77.942 671890 530030 549880 636130 663880 783600 681290 665530 807300 688270 675730 641680 763320 623150 580880 966400 890620 729710 620200 486220 571050 635500 681910 778370 689630 688650 809980 693390 702900 653790 767910 661340 613070 951180 848030 696180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1066499999.9999999 13511 3695 12771 25919 20829 20829 1 9606 Homo sapiens 0.026716377597722385 IMVANIEEVLQR Unmodified 1413.765 0.76498503 3304 O75396;A0A087X1A9 SEC22B Vesicle-trafficking protein SEC22b yes no 0 0 0 7.5 0.5 1 1 63.277 63.304 2 3.7752E-09 19232 20230619_1888_Aki_TMTPro18x_K_F8 189.58 158.09 210710 172870 198250 197730 169940 211200 208960 183170 228670 253600 225350 248790 262510 231180 244390 267260 233080 266090 194750 158490 202020 197870 180030 211910 209040 191040 231920 252390 233200 252050 265910 240930 248350 267880 223350 252630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 447690000 13512 3304 12772 25920;25921 20830;20831 20831 2 9606 Homo sapiens 0.07465313988473099 IMYTVFEHTFHVR Unmodified 1678.829 0.82898227 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4;A0A6Q8PHI7 GARS Glycine--tRNA ligase yes no 0 0 0 4 0 1 60.439 60.442 4 5.8758E-08 18513 20230619_1883_Aki_TMTPro18x_K_F4 160.16 136.31 15481 10361 14300 12019 8431.6 12614 10326 9792.9 15531 21265 18214 24687 22561 21502 21284 21576 19300 28115 14290 9508.7 14523 12016 9314.1 12643 10476 10511 15668 20977 18797 24759 22837 22288 21561 22047 18546 26602 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27182000 13513 3576 12773 25922 20832 20832 1 9606 Homo sapiens 0.01672094145419578 INALTAASEAACLIVSVDETIK Unmodified 2288.1934 0.19336302 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 7.5 0.5 1 1 68.217 68.236 3 0.012856 21212 20230619_1888_Aki_TMTPro18x_K_F8 48.229 30.947 1508 1000.8 617.18 1253.7 1137 1087.8 0 0 923.87 0 0 783.48 982.81 1366.2 685.83 0 1269.6 961.59 1385.9 919.16 711.15 1240.9 1113.3 1088.7 0 0 851.47 0 0 775.66 962.55 1316.3 730.47 0 1206.9 904.26 1 1 1 1 1 1 0 0 1 0 0 1 1 1 1 0 1 1 3406000 13514 4005 12774 25923;25924 20833 20833 1 9606 Homo sapiens 0.100794071411201 INAVVETGR Unmodified 957.52434 0.52434406 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 5.5 0.5 1 1 42.604 42.698 2 0.0062922 10626 20230619_1886_Aki_TMTPro18x_K_F6 91.867 32.886 176050 126670 171520 187900 228800 249070 219660 238250 286230 206790 237880 251540 235320 214050 227680 214520 275690 233920 162630 116510 175580 185440 232960 246870 224030 243210 285640 212180 246320 252020 240060 221990 234200 216740 263030 222130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218550000 13515 2337;3778;3779 12775 25925;25926 20834;20835 20835 2 9606 Homo sapiens 0.04388285783431911 INAVVETGRR Unmodified 1113.6255 0.62545508 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 1 1.5 0.5 1 1 36.969 36.999 3 8.6629E-05 8764 20230619_1880_Aki_TMTPro18x_K_F1 134.57 84.446 91198 62074 80658 74534 89630 79584 94461 94291 112600 102570 110280 114840 114070 99610 98129 108350 132920 122680 84159 56979 82887 74369 92411 80490 95525 95520 113570 103600 113440 115490 115600 103720 102030 109520 126770 116410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163350000 13516 2337;3778;3779 12776 25927;25928 20836 20836 1 9606 Homo sapiens 0.07318737486116333 INCATSWIHPDTK Unmodified 1541.7297 0.72966216 1728 B2R928;A0A804HIS2;Q9Y4K4;D3DSB5;G3V4T8;B3KWC4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 5 yes no 0 0 0 1 0 1 51.138 51.138 3 0.024699 14815 20230619_1880_Aki_TMTPro18x_K_F1 58.071 44.871 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13517 1728 12777 25929 20837 20837 1 9606 Homo sapiens -0.019533485393594674 INCPVYITK Unmodified 1106.5794 0.57941609 3880;2441 B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 no no 0 0 0 2.5 0.5 2 2 51.657 51.712 2;3 0.00014344 14884 20230619_1882_Aki_TMTPro18x_K_F3 166.09 119.66 523610 433120 437050 487480 322930 365490 380320 364450 364570 591820 647950 586490 603690 580880 564700 692360 671580 669070 483540 397010 449650 486370 346220 379070 380170 378790 384320 585410 649110 595740 616100 604960 581530 692310 641520 635740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 926800000 13518 2441;3880 12778 25930;25931;25932;25933 20838;20839 20839 2 9606 Homo sapiens 0.03038956259661063 INDALSCEYECR Unmodified 1528.6286 0.62862749 3982 Q52LJ0;Q52LJ0-1 FAM98B Protein FAM98B yes no 0 0 0 2.5 0.5 1 1 48.204 48.279 3 1.2088E-05 13361 20230619_1882_Aki_TMTPro18x_K_F3 132.99 113.15 164790 148800 177640 175880 195140 222890 214160 189600 247850 203640 235540 242500 235730 204170 245030 248990 352830 240760 152570 136420 179670 176030 201860 221050 215800 196440 249920 206360 242350 243170 241210 214170 254910 249040 335770 229180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 240220000 13519 3982 12779 25934;25935 20840;20841 20841 2 9606 Homo sapiens -0.11454168304339873 INDFVLSPGPQPYK Unmodified 1573.814 0.81404372 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;C9IZE1 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 1.5 0.5 1 1 61.167 61.173 3 0.00031372 19122 20230619_1881_Aki_TMTPro18x_K_F2 92.636 78.478 106370 83876 106330 109460 111060 116670 113030 125850 112720 117500 115270 125140 130980 106680 130680 149740 126510 138650 98332 77010 108090 108550 114960 117640 113920 127680 115040 119380 118940 126110 133130 112930 132770 149100 121170 131760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 454320000 13520 4468 12780 25936;25937 20842;20843 20843 2 9606 Homo sapiens 0.05008925549122978 INDYVEK Unmodified 879.4338 0.43379771 2785 CON__P34955 yes yes 0 0 0 4.5 0.5 1 1 47.411 47.47 2 0.012295 12811 20230619_1883_Aki_TMTPro18x_K_F4 115.49 60.111 + 61084 108760 178900 85690 629750 657450 299650 303090 536900 131950 219720 352970 118840 141970 250730 90545 225960 348370 57799 99218 178130 95780 609500 613290 328050 329030 519760 150260 236970 340520 131200 150710 250420 106700 217280 327700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215080000 13521 2785 12781 25938;25939 20844 20844 1 -0.010741832648591298 INEAVECLLSLK Unmodified 1387.7381 0.73810158 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 2 0 1 65.156 65.163 3 6.8036E-05 20866 20230619_1881_Aki_TMTPro18x_K_F2 115.34 83.748 28385 26808 26465 30850 22421 29486 31552 31113 32001 40077 36718 38346 43192 36862 34615 44854 38299 43991 26258 24567 27019 30810 23889 29953 31304 31916 32806 39955 37741 38954 43468 38498 35612 44867 36648 41771 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104170000 13522 3402 12782 25940 20845 20845 1 9606 Homo sapiens 0.059742053772879444 INEEISVK Unmodified 930.50221 0.50221163 95 Q9BUJ2;A0A0A0MRA5;Q9BUJ2-2;Q9BUJ2-4;A8K6U7;A8K3W4;B7Z4B8;A0A024R0J9;A8K5K0;M0QYZ0;M0R3F1;M0QYI8;M0QYM5 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 4 0 1 48.353 48.393 2 0.0021416 13242 20230619_1883_Aki_TMTPro18x_K_F4 131.44 66.402 230820 169290 209260 238290 291810 274710 250210 271560 333740 308870 318960 354360 341780 297090 311340 337600 382720 366520 213130 155610 215710 235370 295280 275020 257290 278560 334750 311580 329160 355590 346780 310470 321190 340170 365380 347870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91075000 13523 95 12783 25941 20846;20847 20847 2 9606 Homo sapiens 0.03418061315016985 INEELESQYQQSMDSK Unmodified 1927.8469 0.84693634 2936 E9PM92;O00193;E9PRZ9 C11orf58;SMAP Small acidic protein yes no 0 0 0 3.5 0.5 1 1 55.697 55.722 3 2.2E-12 16671 20230619_1882_Aki_TMTPro18x_K_F3 169.15 159.88 94318 71908 84756 99840 72174 100050 93256 98143 102070 119280 104760 125440 127580 106680 110240 143920 140180 154090 87103 66075 86821 98497 76715 101040 93116 100960 103720 119560 108500 126390 128680 112660 114250 144480 133930 146200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 368460000 13524 2936 12784 25942;25943 20848 20848 1 9606 Homo sapiens -0.07987324971691123 INEELESQYQQSMDSK Oxidation (M) 1943.8419 0.84185096 2936 E9PM92;O00193;E9PRZ9 C11orf58;SMAP Small acidic protein yes no 0 1 0 3.2 0.748 1 2 2 51.43 51.478 3 0.00032367 14560 20230619_1883_Aki_TMTPro18x_K_F4 81.428 71.37 99225 84186 99024 96097 115150 120450 110730 114650 128520 115270 121240 115800 128150 103130 115040 144400 137550 141880 91770 77170 100820 96427 118180 119850 112470 117500 129630 116500 124990 117210 129940 109010 118620 144200 131420 134770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 307010000 13525 2936 12784 25944;25945;25946;25947;25948 20849;20850 20849 1746 2 9606 Homo sapiens -0.09231628834322692 INEILSNALK Unmodified 1113.6394 0.63937381 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;B4DEG4 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 2 0 1 62.377 62.386 3 5.3812E-06 19679 20230619_1881_Aki_TMTPro18x_K_F2 160.97 123.25 444290 349030 407610 444240 441220 534280 489090 506820 540440 377810 363660 339410 357340 309930 436140 420950 369070 348840 410440 320380 417930 441950 457390 532580 491890 516120 540180 387860 381240 345650 368720 326440 438330 417280 353640 332160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112110000 13526 3631 12785 25949 20851 20851 1 9606 Homo sapiens 0.08709970194558991 INEKPQVIADYESGR Unmodified 1717.8635 0.8635131 3287 O60869-2;O60869-3;O60869 EDF1 Endothelial differentiation-related factor 1 yes no 0 0 1 5.5 0.5 1 1 49.286 49.363 3 7.0786E-08 13424 20230619_1885_Aki_TMTPro18x_K_F5 119.4 95.921 339150 261930 365330 365810 310990 345880 364610 298730 311000 404320 407900 313470 344550 253260 434900 239840 258380 181810 313700 240680 368110 360560 328500 350170 362990 311530 324060 400020 410780 320190 357350 262700 429800 238740 248390 173580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 696870000 13527 3287 12786 25950;25951 20852;20853 20852 2 9606 Homo sapiens 0.03329588767223868 INELTGIK Unmodified 886.51238 0.51238239 1235 C9JX88;A0A140VK70;P35998;Q75L23;C9JLS9;B7Z571 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 7.5 0.5 1 1 53.47 53.541 2 0.024096 15146 20230619_1887_Aki_TMTPro18x_K_F7 92.051 8.0529 128960 87073 111280 131050 121230 133450 135150 126480 166350 152580 140580 158050 171760 148420 141250 193720 182210 190750 118980 80127 114780 128690 125590 134560 136370 130440 166720 153030 146910 159880 172950 155800 146720 193610 174000 181170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 325200000 13528 1235 12787 25952;25953 20854 20854 1 9606 Homo sapiens 0.06458669040250697 INEMVHFDLPGQEER Unmodified 1812.8465 0.84648283 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q5SV16 ATAD3A ATPase family AAA domain-containing protein 3A yes no 0 0 0 4.5 0.5 1 1 56.794 56.827 3 8.3642E-08 16599 20230619_1885_Aki_TMTPro18x_K_F5 112.3 94.598 35346 29377 33375 33378 30468 34024 40286 38478 47128 37280 37757 42270 40618 31007 43490 38412 38378 43808 32671 26929 34029 33408 32153 34464 40251 38977 47218 37898 39350 42286 41474 32769 43864 38799 36807 41532 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 346250000 13529 4603 12788 25954;25955 20855 20855 1 9606 Homo sapiens -0.027426551102280428 INENDPEYIR Unmodified 1261.5939 0.59388018 4022 Q59EK1;Q5VU08;Q9UEY8-2;Q9UEY8 ADD3 Gamma-adducin yes no 0 0 0 1.5 0.5 1 1 43.539 43.581 2 1.1558E-10 11505 20230619_1881_Aki_TMTPro18x_K_F2 217.66 182.51 40062 34192 36659 30812 35724 43047 39579 38147 47576 44783 45529 47923 51942 39445 41580 54188 53428 55788 37028 31281 37477 31596 37332 42505 39934 39476 47939 45008 47096 48227 52297 41772 43187 54263 51021 52962 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107490000 13530 4022 12789 25956;25957 20856 20856 1 9606 Homo sapiens -0.026453000584751862 INFDDNAEFR Unmodified 1239.552 0.55201537 4365 Q96I99;Q3ZCW5;E9PDQ8;Q96I99-2;B7Z2D5 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 2 0 1 52.539 52.572 2 1.5129E-06 15586 20230619_1881_Aki_TMTPro18x_K_F2 174.98 150.83 147020 127500 144650 129610 134410 175500 159830 172230 201480 118630 120330 126420 138250 111530 167770 145930 139700 156660 135980 116740 146940 131440 141390 173870 160960 174660 199400 123140 128190 127570 141910 117400 168410 146750 134050 148620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131700000 13531 4365 12790 25958 20857 20857 1 9606 Homo sapiens -0.05817855747022804 INFDSNSAYR Unmodified 1185.5415 0.54145068 1360 Q9P2R7;Q9P2R7-2;A0A2R8Y6Y7;Q6N0B1;E5KS55;E5KS60;A0A2R8YDQ9;B4DRV2;B7ZAF6;Q7Z503;B4DY87;A0A0S2Z511;Q5T9Q5;B7Z9S6;Q9Y4T0;Q5T9Q8 SUCLA2;DKFZp686D0880;DKFZp564P2062 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 6.5 0.5 1 1 46.351 46.436 2 4.7708E-05 12351 20230619_1886_Aki_TMTPro18x_K_F6 146.11 127.95 49713 43258 47116 55945 46185 57842 58107 56375 63167 65178 64000 55786 74956 48659 56879 66866 71118 64250 45967 39699 48133 55466 48423 58291 58051 57934 64123 65108 66032 56851 75200 51471 58993 66722 67860 61078 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113390000 13532 1360 12791 25959;25960 20858 20858 1 9606 Homo sapiens -0.04389838401448287 INFYCPGSALGR Unmodified 1353.65 0.64995528 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 4 0.816 1 1 1 55.941 55.978 2 1.2227E-09 16604 20230619_1883_Aki_TMTPro18x_K_F4 187.33 146.55 375270 313610 328020 365730 319250 346990 375580 358470 368700 413400 377430 370840 446050 364280 387250 467530 432100 431320 346680 287550 337240 364890 333780 352670 375260 366980 376730 413480 389840 378310 450200 381520 397730 465910 412990 410050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 771510000 13533 4746 12792 25961;25962;25963 20859;20860 20859 2 9606 Homo sapiens -0.012723704226800692 INGDWQR Unmodified 887.42496 0.42496436 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HI40;A0A804HIQ7;B4DSR0;A0A804HJI0;A0A804HJG8 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 5.5 0.5 1 1 41.305 41.395 2 0.013493 10131 20230619_1886_Aki_TMTPro18x_K_F6 113.89 85.671 142500 125550 154680 144180 176580 181080 176530 179560 213720 164810 182820 187940 190910 144840 192010 174280 190570 163970 131930 115080 156370 144630 181580 180320 179150 183110 214250 168120 189450 188280 194520 152430 195040 174170 182170 155950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 111030000 13534 1723 12793 25964;25965 20861;20862 20862 2 9606 Homo sapiens -0.02325112110668215 INGEAQPWLSTSTEGLK Unmodified 1829.9159 0.9159426 4175 Q7Z5L9-2;Q7Z5L9;B4DSJ2 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes no 0 0 0 7 0 1 59.397 59.443 3 0.0025259 17574 20230619_1887_Aki_TMTPro18x_K_F7 65.105 53.336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13535 4175 12794 25966 20863 20863 1 9606 Homo sapiens 0.034181271101488164 INGGGGGSVPGIER Unmodified 1268.6473 0.64731274 3194 M0QZM1 HNRNPM yes yes 0 0 0 6 0 1 42.737 42.831 2 0.00018285 10708 20230619_1886_Aki_TMTPro18x_K_F6 120.84 87.1 27670 22160 23928 26425 31465 36885 36026 28619 37301 33128 39924 31815 36245 29948 35229 37462 35746 30214 25554 20326 24757 26466 32228 36311 36071 29942 38006 33221 40625 32335 37050 31344 35881 37119 34159 28795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28673000 13536 3194 12795 25967 20864 20864 1 9606 Homo sapiens 0.02373497444023087 INHTFRPQVEK Unmodified 1367.731 0.73098279 3035 Q8NFC6;H0Y9Y2 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes no 0 0 1 2.5 0.5 1 1 38.546 38.604 4 0.046472 9151 20230619_1881_Aki_TMTPro18x_K_F2 61.435 24.244 60132 41277 59243 64921 62866 80819 75384 64749 84661 80865 80282 73582 96562 67310 68025 94882 82466 101860 55540 38002 60369 63777 65442 80089 75534 67710 85563 80674 83211 74869 96586 71195 70627 95197 78897 96606 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44563000 13537 3035 12796 25968;25969 20865 20865 1 9606 Homo sapiens 0.06182653611722344 INIILSETDRDPLQVV Unmodified 1823.9993 0.9992783 267 Q658J0;A0A024R3V5;A0A024R3V7;Q9GZT8-2;Q9GZT8 DKFZp762L015;NIF3L1 NIF3-like protein 1 yes no 0 0 1 5 0 1 64.243 64.287 3 0.081848 19876 20230619_1885_Aki_TMTPro18x_K_F5 30.536 15.374 32176 21356 26871 31523 28077 35568 33404 32393 36314 35531 37218 37204 39002 36143 38146 47032 39875 51804 29677 19650 27792 31034 29260 35563 33460 33401 36867 35800 38228 37682 39731 37890 38955 47322 38218 49109 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60817000 13538 267 12797 25970 20866 20866 1 9606 Homo sapiens 0.12023863558010817 INISEGNCPER Unmodified 1287.5877 0.58774895 3930;3929;2914 Q15365;Q53SS8;F8VTZ0;E9PFP8;P57721-4;P57721;J3QT27;Q5MJP6;P57721-2;P57721-3;P57721-5;Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DRD7;B4DLC0;F8W0G4;F8VXH9;F8W1G6 PCBP1;PCBP2;PCBP3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 no no 0 0 0 3 0.816 1 1 1 40.804 40.863 2 1.1806E-08 9886 20230619_1883_Aki_TMTPro18x_K_F4 181.53 152.8 720530 556750 581590 641910 679970 757310 721000 723540 897090 836970 824670 754270 925990 735800 653870 975060 913170 776050 664960 510580 604220 642870 700270 756360 729910 744350 901180 837550 853090 769430 928850 772280 685720 963960 870260 739710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4562300000 13539 3929;2914;3930 12798 25971;25972;25973 20867;20868;20869 20869 3 9606 Homo sapiens -0.044541415616549784 INIYSNSLEAVAR Unmodified 1448.7623 0.7623425 791 A0A067XG54;A0A804HIW2;Q8NB49-2;Q8NB49-3;Q8NB49-4;Q8NB49 ATP11C Phospholipid-transporting ATPase;Phospholipid-transporting ATPase IG yes no 0 0 0 1 0 1 56.564 56.564 2 0.0030109 17046 20230619_1880_Aki_TMTPro18x_K_F1 101.56 61.846 49440 47740 51815 44572 48211 59232 56969 50511 53412 57865 55948 54495 57202 50305 58745 69478 69597 70878 45786 43668 52351 45515 50616 58602 56828 52404 54748 57984 57350 55364 58441 53046 60368 69550 66494 67301 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24398000 13540 791 12799 25974 20870 20870 1 9606 Homo sapiens 0.05591181855174909 INLIAPPR Unmodified 892.54944 0.54943659 3389 Q53XC0;P05198;H0YJS4;G3V4T5 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 3.5 0.5 1 1 51.177 51.226 2 0.0023222 14570 20230619_1883_Aki_TMTPro18x_K_F4 128.57 73.125 807490 709350 793310 841490 745100 872250 871940 889780 884510 956020 997130 1018600 1089700 837090 929960 1091500 1095500 1092400 746900 650400 806700 839550 781410 880080 872570 909590 905300 964180 1021900 1025200 1101100 883320 958460 1092300 1046500 1037600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 618170000 13541 3389 12800 25975;25976 20871;20872 20872 2 9606 Homo sapiens 0.09886385376648832 INLNLIYDHNPK Unmodified 1452.7725 0.77251325 1618 O95163;B4E3I9;A0A6Q8PHC9;Q4LE38;Q8N516;A0A6Q8PFH9;F5H2T0;B3KXE7;A0A6Q8PF66;A0A6Q8PGW3;A0A6Q8PHF4;A0A6Q8PG86;A0A6Q8PEX6;A0A6Q8PFB7;A0A6Q8PHI5;A0A6Q8PH48;Q68DI5;A0A6Q8PFN8;A0A6Q8PHA0;A0A6Q8PGR0;A0A6Q8PF69 IKBKAP;IKBKAP variant protein;DKFZp781H1425 Elongator complex protein 1 yes no 0 0 0 2 0 1 55.005 55.026 3 4.4473E-07 16560 20230619_1881_Aki_TMTPro18x_K_F2 153.49 125.84 53983 45650 50698 58242 55497 67747 63863 62139 77785 70082 61645 63433 69543 61818 68456 69028 69430 80882 49902 41892 51907 57893 57566 67634 64313 64077 77823 70231 64379 64625 70700 64224 69690 69912 66500 76655 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65864000 13542 1618 12801 25977 20873 20873 1 9606 Homo sapiens 0.06423789580435368 INLPAPNPDHVGGYK Unmodified 1590.8154 0.8154407 4002 Q53GR7;Q9UJS0;Q9UJS0-2;B7Z2E2 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes no 0 0 0 4.5 3.5 1 1 49.714 49.75 3 3.8874E-08 14237 20230619_1880_Aki_TMTPro18x_K_F1 139.73 109.16 131790 116200 133000 126280 114930 134530 135070 133890 140720 168070 140820 141700 187110 135160 132260 178410 151580 142290 121930 106450 134700 126890 121380 135440 135260 137720 143270 167170 146470 144830 186720 142010 136770 176450 144780 135560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 328090000 13543 4002 12802 25978;25979 20874;20875 20874 2 9606 Homo sapiens 0.043665596378104965 INLQQQPPPLQIK Unmodified 1515.8773 0.87731267 2499 B4DJ39;O94842-3;O94842-2;O94842;A0A669KB71 TOX4 TOX high mobility group box family member 4 yes no 0 0 0 3 0 1 57.192 57.225 3 0.00010605 17287 20230619_1882_Aki_TMTPro18x_K_F3 100.09 83.06 49457 38801 47193 48755 49809 56424 59286 59940 62271 47183 43967 44846 46787 42070 52899 48421 48846 46675 45702 35612 48186 48530 51792 56542 59307 60639 62505 48316 46129 45549 47974 43815 53434 48480 46759 44359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175210000 13544 2499 12803 25980 20876 20876 1 9606 Homo sapiens 0.140009110569963 INLWHLEITDR Unmodified 1408.7463 0.7462985 1204 A0A140VJT0;P63151;P63151-2;Q56VW8;A0A590UJY3;A0A590UJJ1;Q66LE6;Q6IN90;Q6PEG1 PPP2R2A;PPP2R2D Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform yes no 0 0 0 8 0 1 58.461 58.508 3 2.5113999999999998E-23 17178 20230619_1888_Aki_TMTPro18x_K_F8 209.19 188.13 65218 57388 69933 61817 49561 58612 64271 61547 68540 73543 69773 79831 86577 74759 80568 88908 72835 88014 60370 52571 70293 62080 53499 59601 64122 63016 69681 73865 72350 80568 87535 78022 81658 89048 69868 83550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23469000 13545 1204 12804 25981 20877 20877 1 9606 Homo sapiens 0.05827520408934106 INMPHEDCITALCFCNAEK Unmodified 2321.9901 0.99012865 2021 Q8IWA0;A8K330 WDR75 WD repeat-containing protein 75 yes no 0 0 0 7 0 1 57.503 57.558 3 3.0907E-10 16820 20230619_1887_Aki_TMTPro18x_K_F7 126.84 118.63 21104 16346 21320 21967 19771 20695 22140 21905 22940 29087 27395 24607 30371 21868 21520 34499 32109 30661 19509 15014 21618 21706 20709 21054 22223 22487 23537 28860 27999 25113 30464 23334 22695 34206 30609 29168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13489000 13546 2021 12805 25982 20878 20878 1 9606 Homo sapiens -0.1179868044810064 INMVEELEK Unmodified 1103.5533 0.55326092 3911 Q15046;Q15046-2 KARS Lysine--tRNA ligase yes no 0 0 0 4.5 0.5 1 1 58.762 58.792 3 0.00030483 17821 20230619_1883_Aki_TMTPro18x_K_F4 119.16 51.592 120240 100440 108430 110230 94836 134930 109590 115830 135670 133650 126160 127760 144830 117620 127790 147290 132420 144420 111110 92043 110960 110870 100290 134080 110500 120090 136400 133960 130710 129630 146370 123270 130610 147320 126740 137160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117360000 13547 3911 12806 25983;25984 20879;20880 20879 2 9606 Homo sapiens 0.005626422975637979 INNAAFEAVVVTNTIPQEDK Unmodified 2172.1063 0.10626257 2257 B2R860;P11908;A0A140VK41;P11908-2;H7C540 PRPS2 Ribose-phosphate pyrophosphokinase 2 yes no 0 0 0 6 0 1 62.33 62.381 3 2.7808E-09 19162 20230619_1886_Aki_TMTPro18x_K_F6 94.057 77.751 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13548 2257 12807 25985 20881 20881 1 9606 Homo sapiens 0.06709368981728403 INNACFEAVVVTNTIPQEDK Unmodified 2261.0998 0.099796984 3683 Q53FW2;P60891;B1ALA9;P60891-2;A0A6Q8PGP2;B7ZB02;A0A0A0MRQ9 PRPS1 Ribose-phosphate pyrophosphokinase 1 yes no 0 0 0 6 0 1 61.659 61.713 3 6.8119E-23 18862 20230619_1886_Aki_TMTPro18x_K_F6 188.9 171.88 51880 38634 47392 45805 38915 43368 44530 41848 52356 56049 54581 60225 52278 51189 60239 51547 54112 68441 47910 35445 48372 45655 41268 44017 44835 43258 53007 56007 55855 60590 53842 53117 60733 52769 51932 64774 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146050000 13549 3683 12808 25986 20882 20882 1 9606 Homo sapiens 0.01969107758759492 INNVPAEGENEVNNELANR Unmodified 2094.993 0.99302373 572 Q9NUQ9;A0A024R9G4;A0A8V8TMP7;Q68D08;Q9NUQ9-2 FAM49B;DKFZp686B04128 Protein FAM49B yes no 0 0 0 2 0 1 50.178 50.23 3 1.5135E-24 14548 20230619_1881_Aki_TMTPro18x_K_F2 195.92 179.39 100260 146180 143850 153050 133240 106740 144370 158430 149780 134030 172970 138020 184840 82820 199310 114960 107550 134180 93494 133690 142350 153530 139060 112830 145210 157650 153120 136770 176730 138180 188290 89334 196890 116350 103970 127140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1487599999.9999998 13550 572 12809 25987 20883 20883 1 9606 Homo sapiens -0.010673064114143926 INPDEREEMK Unmodified 1259.5816 0.58160094 2822 D3DT44;P48507;P48507-2 GCLM Glutamate--cysteine ligase regulatory subunit yes no 0 0 1 2 0 1 39.387 39.457 3 0.0082467 9557 20230619_1881_Aki_TMTPro18x_K_F2 79.659 54.273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13551 2822 12810 25988 20884 20884 1 9606 Homo sapiens -0.03780659793187624 INPDGSQSVVEVPYAR Unmodified 1729.8635 0.8635131 2984 F8W031;F8VXJ7;Q9Y2B0;F8W1K5 CNPY2 Protein canopy homolog 2 yes no 0 0 0 5.5 0.5 1 1 52.305 52.38 2;3 1.4764000000000001E-25 14934 20230619_1886_Aki_TMTPro18x_K_F6 273.66 232.49 103670 89522 98467 110540 98123 116440 120430 107730 127600 117140 138440 134370 128520 119560 137480 133890 140240 149640 95855 82118 100550 109970 102610 117080 120330 110980 129940 118440 141100 135170 131970 124540 139770 135220 134220 141930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 452990000 13552 2984 12811 25989;25990 20885;20886 20886 2 9606 Homo sapiens 0.027775887672532917 INPELNQK Unmodified 954.51345 0.51344502 520 A0A024R8K3;B5BU16;A8K3Y2;P52564-2;P52564;D3DXI2;C7DUW4;Q6FI23;Q6FHG1;Q53EZ9;P46734-2;P46734;P46734-3 MAP2K6;hCG_28371;MAP2K3 Dual specificity mitogen-activated protein kinase kinase 6;Dual specificity mitogen-activated protein kinase kinase 3 yes no 0 0 0 6 0 1 44.252 44.344 3 0.0031171 11413 20230619_1886_Aki_TMTPro18x_K_F6 84.743 51.347 44383 37298 42942 42567 51921 49556 53185 50270 64207 50291 71301 75505 57290 57247 62800 55845 76275 75930 41036 34191 43869 42667 53208 49627 53886 51323 64978 51609 72243 74870 59246 59550 64466 57293 72847 71907 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60017000 13553 520 12812 25991 20887 20887 1 9606 Homo sapiens 0.03436883409131042 INPETVNLSI Unmodified 1098.5921 0.59208927 4268 Q8TCG1;Q8TCG1-2 KIAA1524 Protein CIP2A yes no 0 0 0 4.5 0.5 1 1 62.778 62.804 2 0.083895 19199 20230619_1885_Aki_TMTPro18x_K_F5 59.8 41.952 65038 43935 60564 75111 62387 56353 65981 70277 72326 75621 56384 69585 69091 69268 75727 76429 85817 83221 60039 40498 61991 72999 64665 58723 66531 70991 72778 75936 59285 70846 70527 71816 77444 77072 81994 78982 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104980000 13554 4268 12813 25992;25993 20888 20888 1 9606 Homo sapiens 0.04673690923596041 INPICNDHYR Unmodified 1300.5983 0.59825406 4376 V9HWH0;Q96KB5;Q96KB5-2;E5RFX4 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase yes no 0 0 0 6.5 0.5 1 1 38.416 38.489 3 7.8999E-06 8908 20230619_1886_Aki_TMTPro18x_K_F6 134.57 110.85 62129 41674 47858 50439 57324 55363 55634 53874 71978 61040 74750 69566 79032 60531 52225 75627 80874 68521 57275 38259 49947 50291 58752 55603 56694 55341 72470 61592 76669 69977 79228 63547 55282 75292 77017 65203 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210280000 13555 4376 12814 25994;25995 20889 20889 1 9606 Homo sapiens -0.04002114116565281 INPSSMFDVHVK Unmodified 1372.6809 0.68092105 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 1.5 0.5 1 1 56.021 56.031 3 6.8447E-10 17003 20230619_1881_Aki_TMTPro18x_K_F2 180.48 150.04 202360 175780 193280 220190 184400 225690 197830 221910 231290 261060 269160 288230 262380 244690 273480 265910 272180 312040 187120 161260 197130 218770 192840 227660 199880 227980 235390 262480 274260 289770 268640 254930 277800 269490 260710 295740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 394970000 13556 3432 12815 25996;25997 20890;20891 20891 2 9606 Homo sapiens 0.009487828915780483 INQGWLDSSR Unmodified 1174.5731 0.57308516 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8;G3V3J0 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 7.5 0.5 1 1 49.886 49.963 2 1.1084E-06 13497 20230619_1888_Aki_TMTPro18x_K_F8 208.66 175.28 532590 467840 518720 537920 528730 647680 590750 579280 652790 716480 668880 650790 742140 553700 636410 788750 742160 691690 492590 428830 528450 539010 550620 644990 594040 600090 662710 714650 688560 660530 749640 587070 655660 782940 708730 658180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 337100000 13557 385 12816 25998;25999 20892;20893 20893 2 9606 Homo sapiens -0.007218456474902268 INQLPEAER Unmodified 1068.5564 0.55637247 4489 Q9H061;E9PI90 TMEM126A Transmembrane protein 126A yes no 0 0 0 3 0 1 42.11 42.173 2 0.002239 10535 20230619_1882_Aki_TMTPro18x_K_F3 108.3 91.376 84109 62650 80774 94346 100310 112670 111220 120050 151480 109040 121100 128270 129140 114530 97476 128380 148210 134440 77704 57629 82727 92873 103020 112650 112710 121800 150680 111450 126030 128900 130140 119300 102640 129040 141220 127680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104570000 13558 4489 12817 26000 20894 20894 1 9606 Homo sapiens 0.024836534665837462 INQLSEENGDLSFK Unmodified 1592.7682 0.76821574 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;Q14980-5;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 5 0.816 1 1 1 56.692 56.738 3 0.001361 16573 20230619_1885_Aki_TMTPro18x_K_F5 74.789 53.158 202620 149800 163460 212800 177430 214640 189240 213130 211660 216460 205500 204040 222040 186780 212320 269060 243340 253260 186950 137700 169830 209630 183780 216760 190890 217890 214230 218180 211880 207270 225660 197600 218110 267980 232600 240670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 405670000 13559 349;3906 12818 26001;26002;26003 20895;20896 20895 2 9606 Homo sapiens -0.004457644238073044 INQLYEQAK Unmodified 1105.5768 0.57677356 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A0A0U1RRM8 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 8 0 1 50.457 50.533 2 0.00040595 13722 20230619_1888_Aki_TMTPro18x_K_F8 153.24 78.758 116440 85691 94770 110000 137730 149490 128100 128380 161300 114190 106550 89676 99168 79341 106280 127910 120030 81799 107440 78685 98814 109570 139490 147670 130670 132190 160170 115530 111480 91932 101800 84720 108820 125120 114440 78322 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52287000 13560 385 12819 26004 20897 20897 1 9606 Homo sapiens 0.028208241263882883 INQMATAPDSQR Oxidation (M) 1346.6249 0.62486274 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 1 0 4 0 1 33.741 33.795 2 0.00017179 7042 20230619_1883_Aki_TMTPro18x_K_F4 115.91 93.829 22066 18120 22396 21691 28180 28887 25584 26512 31449 21391 26411 29408 25617 21754 27524 28299 29669 26875 20406 16619 22803 21711 28733 28615 26128 27108 31472 22151 27327 29237 26267 23027 28076 28253 28347 25551 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23505000 13561 4191 12820 26005 20898 20898 2698 1 9606 Homo sapiens -0.03458470015925741 INQQEEPGFEVITR Unmodified 1658.8264 0.82639932 2120 A8K8E1;Q8TC07-2;Q8TC07-3;Q8TC07;C9JA93 TBC1D15 TBC1 domain family member 15 yes no 0 0 0 3 0 1 52.462 52.521 2 0.00016564 15255 20230619_1882_Aki_TMTPro18x_K_F3 125.97 74.703 13774 12213 14117 17668 11123 14232 15810 15067 15128 19188 18048 17213 20437 16785 17772 21140 20721 22561 12746 11222 14292 17341 11924 14663 15653 15454 15586 19103 18480 17554 20653 17568 18300 21242 19810 21406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41215000 13562 2120 12821 26006 20899 20899 1 9606 Homo sapiens 0.02333917221471893 INSAPQQIEVFPPFR Unmodified 1741.9152 0.91515474 4273 Q8TEM1;A0A8Q3WKI1 NUP210 Nuclear pore membrane glycoprotein 210 yes no 0 0 0 2 0 1 61.793 61.803 3 0.00063853 19380 20230619_1881_Aki_TMTPro18x_K_F2 82.529 63.707 44178 36428 43072 45357 39756 44884 37593 44922 45068 43014 49377 52342 49712 42170 52805 58775 44498 55968 40843 33424 43801 45071 41523 45423 38310 45833 45659 43848 50505 52394 50858 44700 53223 58621 42735 53146 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13179000 13563 4273 12822 26007 20900 20900 1 9606 Homo sapiens 0.07387377251757243 INSIEIAPCLL Unmodified 1241.669 0.66895938 4162 Q7Z2W9;A0A024R5G7;Q7Z2W9-2 MRPL21 39S ribosomal protein L21, mitochondrial yes no 0 0 0 7 0.816 1 1 1 65.597 65.619 2 0.005338 20601 20230619_1886_Aki_TMTPro18x_K_F6 106.38 63.197 35024 26483 26976 38523 34395 28342 31555 31049 39055 36921 40557 35067 31368 28899 29605 39511 38898 41183 32309 24349 28237 37755 35019 29516 32212 31713 39414 36943 41093 35499 32247 30571 30706 39594 37144 39089 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 317050000 13564 4162 12823 26008;26009;26010 20901;20902 20901 2 9606 Homo sapiens 0.05779166148386139 INSQLVAQQVAQQYATPPPPKK Unmodified 2405.3067 0.30669371 4230 Q8N488 RYBP RING1 and YY1-binding protein yes yes 0 0 1 5 0 1 55.381 55.445 4 0.00089601 16020 20230619_1885_Aki_TMTPro18x_K_F5 71.527 59.399 17797 14460 15543 19344 18747 22735 21428 19679 23312 27063 22412 24109 25943 20922 23395 26025 24612 25726 16439 13278 16054 19167 19311 22655 21499 20514 23639 26862 23205 24485 26238 21966 23916 26047 23544 24433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28399000 13565 4230 12824 26011 20903 20903 1 9606 Homo sapiens 0.16025263369283493 INSVEVYDGTWYR Unmodified 1600.7522 0.75217174 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-5;Q59FV9;H7C5L0 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 6 0 1 58.476 58.541 2 1.7047E-27 17505 20230619_1886_Aki_TMTPro18x_K_F6 250.51 233.27 37614 28966 39272 37840 32681 41741 39188 39990 39526 46711 45450 54486 49997 45939 59251 49507 49899 59330 34780 26597 39654 37541 34675 41855 39172 41156 40525 47065 46647 54628 51332 47854 59519 50276 47898 56213 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79696000 13566 3847 12825 26012 20904 20904 1 9606 Homo sapiens -0.024174258700440987 INVLAAQYQSLLNSYGEPVDDK Unmodified 2436.2173 0.21726958 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;O00429-7;H0YI79;A0A994J6A0;A0A994J3G1;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 0 8 0 1 64.829 64.85 3 2.3334E-17 19879 20230619_1888_Aki_TMTPro18x_K_F8 162.44 146.13 41457 33084 41041 57192 43139 59090 52784 50650 68548 62694 54439 55065 73522 62587 40159 79679 79356 98044 38325 30479 41876 55729 45016 59350 53123 52665 68400 62530 57311 56535 72898 65267 43810 80680 75678 92860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50334000 13567 3212;3213 12826 26013 20905 20905 1 9606 Homo sapiens 0.05660963899208582 INVLHKPPYEHPK Unmodified 1570.862 0.86199696 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2;O15294-4 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 1 2.5 0.5 1 1 41.605 41.675 5 5.2205E-06 10277 20230619_1882_Aki_TMTPro18x_K_F3 136.3 116.9 76636 53863 65186 68238 58972 71856 69571 65253 74343 83478 89495 76813 95540 83943 79957 119760 104560 102260 70714 49462 67100 67777 62112 72222 69703 67622 76107 83198 91276 78658 96618 88219 83160 118660 99786 97321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174440000 13568 1842 12827 26014;26015 20906 20906 1 9606 Homo sapiens 0.0994004425976982 INVSGLTTK Unmodified 931.53385 0.53384611 1234 Q2TU84;A0A140VK69;P17174;P17174-2;B7Z1I2 GIG18;GOT1 Aspartate aminotransferase;Aspartate aminotransferase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 51.167 51.225 3 0.00046277 14680 20230619_1882_Aki_TMTPro18x_K_F3 113.93 45.192 131420 94618 112420 116040 106540 125040 126010 117660 149050 138370 158790 170850 165920 134830 153390 154800 190240 171770 121280 86849 115730 115560 111780 125580 126640 121320 150880 139740 162860 170700 168510 141350 158220 156200 181530 163030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 435830000 13569 1234 12828 26016;26017 20907;20908 20908 2 9606 Homo sapiens 0.06534054068958994 INVTVAK Unmodified 743.45414 0.45413923 430 A0A024R753;Q9NW13;A0A0S2Z5E5;C9JE21;C9JAA9;B4DJ90 RBM28 RNA-binding protein 28 yes no 0 0 0 2.5 0.5 1 1 47.168 47.245 2 0.028757 13119 20230619_1881_Aki_TMTPro18x_K_F2 101.6 78.771 130180 88451 107610 143040 155810 172310 153100 152190 178120 142180 168940 163530 169320 142280 147460 136920 190660 175400 120070 81467 112140 140200 158040 171470 155240 156610 179560 144960 173720 164320 171790 147250 152640 139880 181900 166240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131980000 13570 430 12829 26018;26019 20909 20909 1 9606 Homo sapiens 0.07215032185615655 INVVNNHQAK Unmodified 1135.6098 0.60980502 4336 Q96DI9;Q9BY77;F6VRR5;B4E0L0;F8WCX5;Q659C6;B4DMM2 POLDIP3;DKFZp434G0310 Polymerase delta-interacting protein 3 yes no 0 0 0 1 0 1 36.769 36.769 3 7.7868E-05 8701 20230619_1880_Aki_TMTPro18x_K_F1 133.99 99.916 45566 28836 47174 56454 64987 74534 58811 62689 74980 52288 68146 65985 59842 54118 60435 40380 71845 63306 42086 26641 48117 54906 65969 73661 60151 64574 75104 53867 69861 65938 61399 55502 61954 42157 68571 59917 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40153000 13571 4336 12830 26020 20910 20910 1 9606 Homo sapiens 0.04742450969092715 INVYYNEAAGNK Unmodified 1354.6517 0.65172941 3870 Q13885;B2R6L0;A5D907;A5D906 TUBB2A Tubulin beta-2A chain yes no 0 0 0 7.5 0.5 1 1 50.998 51.075 2 3.2243E-13 14066 20230619_1887_Aki_TMTPro18x_K_F7 253.71 215.62 118720 90449 96057 154790 115300 113690 126340 119640 121480 121290 136010 142350 137350 121630 127440 159100 147510 154470 109550 83330 100090 150310 118450 118180 126590 122000 124620 123110 138980 142910 139720 128080 131060 158930 140990 146740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 163650000 13572 3870 12831 26021;26022 20911;20912 20911 2 9606 Homo sapiens -0.011410381330506425 INVYYNEATGGK Unmodified 1327.6408 0.64083038 3748 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;B4DNW1 TUBB2C;TUBB4B Tubulin beta-4B chain yes no 0 0 0 7.2 0.748 1 2 2 52.653 52.727 2;3 1.001E-17 14782 20230619_1887_Aki_TMTPro18x_K_F7 234.9 179.35 384690 309580 344390 338670 345580 406300 365630 358850 412650 484090 491870 505030 548260 465830 479800 566490 537410 506410 355370 283730 353180 340650 359750 404700 369100 373200 421300 483110 503470 510440 554510 487020 492740 564090 513420 481740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5803300000 13573 3748 12832 26023;26024;26025;26026;26027 20913;20914 20913 2 9606 Homo sapiens -0.009884405073762537 INVYYNEATGGNYVPR Unmodified 1828.8744 0.87441214 3381 P04350;B4DJ43;B4DE77;M0QY85;M0R0X0;M0QY37;M0QX14;M0QZL7;M0R278 TUBB4A Tubulin beta-4A chain yes no 0 0 0 8 0 1 55.285 55.347 3 5.3347E-08 15864 20230619_1888_Aki_TMTPro18x_K_F8 122.08 111.13 218880 187420 176710 239210 212490 249950 198430 211740 229360 232830 228070 218360 228930 184190 223110 277760 267250 243980 202120 171980 183920 237320 217790 251020 201900 219540 231990 233740 234050 221320 233340 196090 229710 275550 255110 232180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207410000 13574 3381 12833 26028 20915 20915 1 9606 Homo sapiens -0.006870088585174017 INVYYNEATGNK Unmodified 1384.6623 0.6622941 1424 A0A384MEE3;Q9BVA1 TUBB2B Tubulin beta-2B chain yes no 0 0 0 6.43 1.4 1 1 1 2 2 52.005 52.073 2;3 7.6084E-08 14367 20230619_1888_Aki_TMTPro18x_K_F8 167.2 136.87 2124700 1756200 1963800 2411900 2081900 2288100 2377300 2410500 2475300 2631800 2710500 2714100 2771000 2218300 2443800 2927000 2717300 2706200 1963600 1613000 2012900 2379400 2161000 2325600 2383300 2460400 2526500 2649400 2772500 2735200 2809700 2342300 2508600 2916200 2597200 2572800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3778799999.9999995 13575 1424 12834 26029;26030;26031;26032;26033;26034;26035 20916;20917 20917 2 9606 Homo sapiens -0.014650554786385328 INVYYNESSSQK Unmodified 1430.6678 0.66777341 2562 B4DP54;Q9BUF5;K7ESQ3;K7EQT3;K7EJ64;K7ERA8;K7EJZ4;K7EL29;K7EN98;K7EPE5 TUBB6 Tubulin beta-6 chain yes no 0 0 0 7 0 1 48.137 48.224 2 0.0001243 12788 20230619_1887_Aki_TMTPro18x_K_F7 138.25 118.46 35658 23278 27278 33563 35372 38912 32153 29604 35758 42528 49809 50334 51850 41013 40172 55102 56912 51115 32866 21414 28563 33092 36040 38723 32723 31248 36813 42520 50520 50443 52288 43358 42059 54878 54251 48613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30203000 13576 2562 12835 26036 20918 20918 1 9606 Homo sapiens -0.030333766868125167 IPAANILGHENK Unmodified 1275.6935 0.69353465 961 A0A384MR53;A0A0A0MT83;A0A2L0RI93;A0A2L0RI88;A0A2L0RI76;P26440;A0A0S2Z4K7;P26440-2;A0A2L0RIE3;H0YLC3;H7C4G6 IVD Isovaleryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 1 0 1 48.204 48.204 3 0.00036863 13620 20230619_1880_Aki_TMTPro18x_K_F1 95.264 64.701 51104 41815 48235 51784 48535 68584 58847 59391 71379 66292 70131 69989 73202 66582 63751 74227 72177 67519 47233 38365 49288 51689 50808 67822 59121 61478 71942 66767 72139 70778 74199 69164 65514 74075 68945 64218 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38108000 13577 961 12836 26037 20919 20919 1 9606 Homo sapiens 0.06671562346150495 IPAFLNVVDIAGLVK Unmodified 1567.9338 0.93376492 3129 J3KQ32;Q9NTK5;B4DK14;Q9NTK5-3;C9JTK6;Q53SW9 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 0 4.67 0.471 1 2 66.902 66.935 2;3 4.2135E-07 20939 20230619_1885_Aki_TMTPro18x_K_F5 127.42 99.411 10445 9162.4 9232.7 9029.5 8031.7 8222.8 8694.2 7149.3 10233 10058 11681 13642 12823 10455 11796 13521 10449 15078 9653.6 8387.1 9458.1 9126.3 8455.6 8361.4 8777.5 7466.5 10395 10120 11980 13574 12996 11054 11951 13619 10043 14288 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 175390000 13578 3129 12837 26038;26039;26040 20920;20921 20921 2 9606 Homo sapiens 0.17251538893629004 IPAGLCATAIDILTTVVR Unmodified 1883.055 0.055019043 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 5.5 0.5 1 1 67.851 67.894 3 2.9427E-10 21311 20230619_1885_Aki_TMTPro18x_K_F5 142.74 133.92 2598.1 4045.8 4183.6 3227.3 3802.6 3535.4 4070 4569.1 4832.7 4506.1 4585.5 6467.9 7025.4 4469.3 4432.8 5912.4 7541.8 10411 2428.1 3692.1 4105.8 3338.6 3978 3581.3 4114.7 4593 4872.8 4614.4 4833.3 6404.3 6962.8 4766.2 4733.3 6162.2 7205.8 9830.3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12575000 13579 4386 12838 26041;26042 20922;20923 20922 2 9606 Homo sapiens 0.14881373473940585 IPAIFSPAFYTSR Unmodified 1468.7715 0.77145062 516 B4DGI3;A0A024R8H5;Q12933-4;Q12933-3;Q12933;Q12933-2 TRAF2 TNF receptor-associated factor 2 yes no 0 0 0 7 0 1 63.966 63.996 2 0.0068857 19650 20230619_1887_Aki_TMTPro18x_K_F7 97.633 67.824 51644 43950 50080 50321 37513 43254 49142 51249 56714 52774 48354 42346 50406 45049 52052 56700 51035 48292 47754 40288 50815 50234 40296 44468 49132 51844 57014 52941 50067 43591 51476 46985 52870 56311 48821 45967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32653000 13580 516 12839 26043 20924 20924 1 9606 Homo sapiens 0.05581575211499512 IPAMTIAK Oxidation (M) 859.48372 0.48372479 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 1 0 1.5 0.5 1 1 46.372 46.412 2 0.043749 12890 20230619_1880_Aki_TMTPro18x_K_F1 69.984 42.847 138770 119910 115720 123930 241370 285130 200560 187390 326810 21799 24223 28314 27908 22339 69750 27147 31369 25280 128180 109810 121480 126880 240130 273760 208040 193690 312750 31827 39346 28391 30475 23491 67831 27239 30342 24053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 383270000 13581 272 12840 26044;26045 20925 20925 168 1 9606 Homo sapiens 0.048362281394588535 IPAMTIAK Unmodified 843.48881 0.48881017 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 3 0 1 54.223 54.27 3 0.010359 16005 20230619_1882_Aki_TMTPro18x_K_F3 74.127 37.107 134520 130930 124830 117590 189020 251040 173030 159610 274940 43117 27301 34464 38866 30918 68328 47082 44733 32581 124460 119720 128610 121630 191400 241550 178230 166200 263750 50132 40274 35352 40806 32859 67536 46315 42944 31144 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183920000 13582 272 12840 26046 20926 20926 1 9606 Homo sapiens 0.060805320020676845 IPASQTSVPFDHLGK Unmodified 1595.8308 0.83075641 2398 Q5U045;Q53EZ1;B3KRV2;P49674;H0Y5S9;H0Y682 CSNK1E Casein kinase I isoform epsilon yes no 0 0 0 1 0 1 52.062 52.062 3 2.1113E-08 15239 20230619_1880_Aki_TMTPro18x_K_F1 142.45 131.01 84816 78810 88020 104440 78519 100410 91600 93498 102400 100700 94701 101190 109140 86085 95473 106740 101860 114620 78518 72328 89118 103270 82765 101640 91965 96218 103440 101400 98203 102170 110240 90441 97742 107340 97487 108740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52787000 13583 2398 12841 26047 20927;20928 20928 2 9606 Homo sapiens 0.05667426435024936 IPASWTNPSGK Unmodified 1156.5877 0.58767259 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1;A0A494C0X4;A0A494C1S4;A0A494C159 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 3 0 1 53.154 53.213 2 0.00037179 15560 20230619_1882_Aki_TMTPro18x_K_F3 140.17 101.88 110970 92285 106420 111630 107560 127440 122480 125420 130690 138450 136960 133390 150620 110930 130940 145320 132400 147400 102590 84647 108550 111370 112100 127600 122920 128590 133000 139030 140800 134900 152220 117090 133660 145550 126770 139920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51280000 13584 1552 12842 26048 20929;20930 20929 2 9606 Homo sapiens 0.015642265006590605 IPAVTYPK Unmodified 887.51165 0.5116541 4150 Q7L0Y3;C9JVB6 TRMT10C Mitochondrial ribonuclease P protein 1 yes no 0 0 0 2.5 0.5 1 1 51.674 51.719 3 0.015661 15165 20230619_1881_Aki_TMTPro18x_K_F2 63.48 38.557 22038 20205 18971 24122 26200 25894 26445 28854 32288 27159 29222 26014 30092 24094 22660 28014 31774 29288 20370 18524 19665 24062 26639 26126 26826 29216 32428 27510 30131 26412 30331 25136 23703 28145 30295 27813 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5778800 13585 4150 12843 26049;26050 20931;20932 20931 2 9606 Homo sapiens 0.0633987439118755 IPAYFVTVSDPAVPPGEDPDGR Unmodified 2298.1168 0.11682726 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32;H0Y426 VARS Valine--tRNA ligase yes no 0 0 0 4 0.816 1 1 1 62.858 62.885 3 2.5852E-23 19529 20230619_1883_Aki_TMTPro18x_K_F4 177 168.78 31978 25956 27351 31609 29237 35564 32386 30717 36794 38827 40420 38355 47388 34271 41521 51090 42560 47038 29533 23812 28228 31503 30346 35546 32608 31938 37398 38794 41591 38854 47820 36399 42437 50810 40742 44703 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 518970000 13586 725 12844 26051;26052;26053 20933;20934 20933 2 9606 Homo sapiens 0.01969351636216743 IPCVDAGLISPLVQLLNSK Unmodified 2036.134 0.13399765 2366 B3KNU0;P52306-4;P52306;P52306-5;B7Z4M5;P52306-6;P52306-2;P52306-3;B7Z2V8;Q6U7G8;D6RHH8;D6RHZ7 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes no 0 0 0 5.5 0.5 1 1 67.249 67.292 3 3.8601E-31 21090 20230619_1885_Aki_TMTPro18x_K_F5 169.64 148.41 20661 17177 19123 22532 17670 17279 18606 22157 18367 24146 23478 22427 21145 19167 22327 24617 28839 26525 19094 15769 19546 22247 18477 17989 18722 22348 18955 24221 23744 22739 21726 20168 23053 24749 27514 25182 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31418000 13587 2366 12845 26054;26055 20935;20936 20935 2 9606 Homo sapiens 0.15737600708303034 IPDHDPAPNVTVLLR Unmodified 1655.8995 0.89950468 1989 Q9P2E9;A7BI36;Q9P2E9-3;A2A2S5;Q32NB1 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 7 0 1 53.995 54.062 3 0.00055592 15395 20230619_1887_Aki_TMTPro18x_K_F7 84.497 67.555 48431 32103 45540 50197 45214 48823 52920 52369 53570 56936 60802 57342 57334 53053 65927 57470 55194 66206 44707 29559 46526 49170 47183 49537 52944 53384 54836 57296 61896 58057 59043 55100 66253 58200 52989 62750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138450000 13588 1989 12846 26056 20937 20937 1 9606 Homo sapiens 0.0977909073471892 IPDIVLWPTCHDDVVK Unmodified 1905.9659 0.96586969 3203 O00116;B7Z3Q4;A0A7P0T984;A0A1B0GWA2;A0A7P0TAL3;A0A2R8YEL0;Q53SG6;A0A7P0T9C9;A0A7P0TAU9;A0A7P0T8Q7;A0A7P0TA54 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes no 0 0 0 7 0 1 62.417 62.453 3 0.00010514 18911 20230619_1887_Aki_TMTPro18x_K_F7 93.51 83.025 144760 111520 137130 131920 106670 159180 134510 127370 144360 168040 152740 166990 207880 152140 154600 191850 185760 210650 133750 102300 139490 131920 114300 158080 134370 133420 147030 167610 158800 169030 207730 159690 160080 193080 177610 199790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313510000 13589 3203 12847 26057 20938 20938 1 9606 Homo sapiens 0.04912538514440712 IPDQLVILDMK Oxidation (M) 1299.7108 0.7108242 398 A0A024R6I3;Q53GF9;P49755;G3V2K7;B4DL12 TMED10 Transmembrane emp24 domain-containing protein 10 yes no 0 1 0 6.5 0.5 1 1 62.065 62.108 3 0.016775 19060 20230619_1886_Aki_TMTPro18x_K_F6 59.57 42.244 173790 137360 167570 187090 172950 187140 184800 196410 225740 222660 206390 222760 227350 215440 226190 244110 233830 274460 160620 126170 170940 184820 179570 189430 186950 200690 226980 223640 213740 225850 231480 223950 230560 246490 223930 260220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 420260000 13590 398 12848 26058;26059 20939;20940 20939 254 2 9606 Homo sapiens 0.07295721836885605 IPDQLVILDMK Unmodified 1283.7159 0.71590958 398 A0A024R6I3;Q53GF9;P49755;G3V2K7;B4DL12 TMED10 Transmembrane emp24 domain-containing protein 10 yes no 0 0 0 7.5 0.5 1 1 63.545 63.572 2 0.066616 19352 20230619_1888_Aki_TMTPro18x_K_F8 61.65 41.863 185520 142890 275260 201260 243070 312410 300860 289970 322220 356010 295400 422240 349540 269410 317860 350170 323120 454880 172170 131320 271330 200010 256640 306760 300700 299430 326340 358080 307620 419820 353330 287470 324290 356300 310020 430450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 725340000 13591 398 12848 26060;26061 20941 20941 1 9606 Homo sapiens 0.08540025699517173 IPDSHEITLK Unmodified 1151.6186 0.61863837 2065 Q9NW82;A8K564;D6RIW8 WDR70 WD repeat-containing protein 70 yes no 0 0 0 6 0 1 47.929 48.008 3 0.0014705 13042 20230619_1886_Aki_TMTPro18x_K_F6 89.827 71.559 40251 34207 35910 40866 51022 58997 44692 43804 70960 38616 43149 42607 44883 37068 44681 47685 52907 53020 37195 31370 37100 40944 51716 57926 46203 45658 69595 39514 45650 42913 45762 38994 45908 48034 50542 50302 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31266000 13592 2065 12849 26062 20942 20942 1 9606 Homo sapiens 0.04889379814903805 IPDWFLNR Unmodified 1059.5502 0.55016488 3710 P62269;J3JS69 RPS18 40S ribosomal protein S18 yes no 0 0 0 2.5 0.5 1 1 62.696 62.715 2 0.0016467 19543 20230619_1882_Aki_TMTPro18x_K_F3 139.31 90.81 2848100 2552400 2641300 2597200 2486000 3501200 2869800 2991600 3649800 1324900 1055100 805400 1031300 899450 2069600 1180300 1169700 897560 2633600 2336900 2698600 2632500 2612600 3458700 2894300 3046000 3563200 1417400 1204300 846800 1103400 939570 2031500 1168800 1125900 856500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2094799999.9999998 13593 3710 12850 26063;26064 20943;20944 20944 2 9606 Homo sapiens 0.022771800257032737 IPEDQHALLVK Unmodified 1261.703 0.7030367 3335 O94874;O94874-2 UFL1 E3 UFM1-protein ligase 1 yes no 0 0 0 5.5 0.5 1 1 48.651 48.729 3 0.00053238 13341 20230619_1886_Aki_TMTPro18x_K_F6 95.401 80.71 72516 58666 74873 72585 80252 86269 90298 83249 112020 90361 91806 92032 108330 86118 89307 113350 103680 101050 67067 53828 75936 72355 83202 86135 91098 85453 112040 91052 95856 93204 109120 90477 92072 112710 99041 96114 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118410000 13594 3335 12851 26065;26066 20945 20945 1 9606 Homo sapiens 0.0826533063163879 IPEGLFDPSNVK Unmodified 1314.682 0.68196691 3368;3332 Q6FI97;Q53FS0;O96019;O96019-2;D3DNS0;O94805 BAF53A;ACTL6A;ACTL6B Actin-like protein 6A;Actin-like protein 6B no no 0 0 0 7.2 0.748 1 2 2 61.927 61.965 2;3 0.002255 18671 20230619_1888_Aki_TMTPro18x_K_F8 74.76 59.884 122820 107450 117490 130320 143470 131860 132720 140680 144910 152360 132740 129110 176150 139780 141190 165920 170500 181950 113580 98546 120220 129770 146480 133510 134850 143390 146640 152640 138640 132530 176700 145330 145940 167120 162930 172600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 678120000 13595 3368;3332 12852 26067;26068;26069;26070;26071 20946;20947 20947 2 9606 Homo sapiens 0.03721320532122263 IPEISIQDMTAQVTSPSGK Oxidation (M) 2017.0038 0.003771334 3484 P21333;P21333-2;Q60FE5;Q60FE6;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91 FLNA;FLJ00119 Filamin-A yes no 0 1 0 7 0 1 57.764 57.817 3 4.2478E-05 16889 20230619_1887_Aki_TMTPro18x_K_F7 88.264 76.79 36329 27503 33312 36007 33224 33114 31871 36961 35466 42577 44354 50989 48374 40009 42014 46140 51446 57867 33554 25257 34094 35629 34464 33802 32361 37639 36324 42955 45307 50980 48938 41976 43379 46909 49177 54814 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8907800 13596 3484 12853 26072 20948 20948 2141 1 9606 Homo sapiens 0.035949599185869374 IPELDFEIPAFSQK Unmodified 1632.8399 0.83992412 2605 H7C0E5;B4DVT8;H7BZM7;O75312 ZPR1 Zinc finger protein ZPR1 yes no 0 0 0 8 0 1 64.686 64.707 3 0.006208 19857 20230619_1888_Aki_TMTPro18x_K_F8 68.83 52.198 50604 38561 48254 46955 38010 48113 46056 48767 53136 48030 41462 61401 60753 52566 58847 70809 52359 55155 46754 35384 49054 46761 40570 48566 46213 49762 53290 48990 44091 61397 61309 55432 59583 69959 50178 52542 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36589000 13597 2605 12854 26073 20949 20949 1 9606 Homo sapiens 0.048817750007174254 IPEMHLK Unmodified 866.46841 0.46840908 3815 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 8 0 1 47.876 47.934 3 0.063329 12691 20230619_1888_Aki_TMTPro18x_K_F8 54.157 22.026 27067 21335 24188 21125 24833 26152 27459 28910 44722 32118 28803 39404 36897 30214 28043 44831 45885 54247 25001 19538 24800 21445 25844 26142 28055 29418 43924 32531 30713 39343 37006 32260 29751 45278 43788 51394 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28515000 13598 3815 12855 26074 20950 20950 1 9606 Homo sapiens 0.029833613422511007 IPENIYR Unmodified 903.48142 0.48141661 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 6.5 0.5 1 1 46.31 46.395 2 0.039915 11901 20230619_1887_Aki_TMTPro18x_K_F7 90.777 42.87 829300 656820 756590 882140 828800 905340 895010 849300 1027900 1045600 1119600 1169200 1128900 971750 1016200 1238000 1219300 1173200 766120 603230 776470 872350 857150 912400 902680 877100 1043500 1049900 1145100 1174600 1146700 1022700 1047800 1235600 1164300 1115100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 954660000 13599 1723 12856 26075;26076 20951 20951 1 9606 Homo sapiens 0.025815157259899024 IPEQSVLLLHACAHNPTGVDPRPEQWK Unmodified 3091.5662 0.56617265 415 B3KUZ8;A0A024R6W0;P00505;A8K482;P00505-2 GOT2 Aspartate aminotransferase;Aspartate aminotransferase, mitochondrial yes no 0 0 1 2 0 1 54.477 54.501 5 2.142E-08 16441 20230619_1881_Aki_TMTPro18x_K_F2 97.063 86.258 33276 27183 37899 40418 40818 39635 37760 39760 67335 38841 43261 40937 49943 41847 40267 48361 49090 53260 30805 24991 38163 39706 42089 40143 39153 40591 65874 39441 45774 41527 50316 43495 41649 48742 46912 50520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 393720000 13600 415 12857 26077 20952 20952 1 9606 Homo sapiens 0.10405221198152503 IPEQTYITLK Unmodified 1204.6703 0.67033959 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;B4DL23;E5RIH6;E5RFU8;E5RJT5 CEP170 Centrosomal protein of 170 kDa yes no 0 0 0 4.5 3.5 1 1 57.618 57.618 2;3 0.00054719 17519 20230619_1880_Aki_TMTPro18x_K_F1 99.522 65.444 56550 44021 46290 61437 51347 49267 55940 58047 59123 69321 68551 67208 75092 60855 62936 79456 74793 73550 52195 40449 48034 60431 53020 50957 56251 59009 60488 69357 70160 68130 75839 63976 64957 79168 71438 69925 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47158000 13601 1960 12858 26078;26079 20953;20954 20953 2 9606 Homo sapiens 0.07619123508789016 IPETYPFNPPK Unmodified 1301.6656 0.66558856 3688 P61086;B4DIZ2;D6RDM7;P61086-3 UBE2K Ubiquitin-conjugating enzyme E2 K yes no 0 0 0 3.67 3.09 1 1 1 57.278 57.301 3 0.00089671 17330 20230619_1880_Aki_TMTPro18x_K_F1 91.855 68.479 104130 97138 107410 110130 99843 117160 118200 116650 129220 139070 130630 135950 140560 111040 142150 165260 143430 151050 96395 89008 108750 110280 104840 117940 118480 119810 131160 139220 134470 137340 143160 118250 144730 164330 137270 143590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 297210000 13602 3688 12859 26080;26081;26082 20955;20956 20955 2 9606 Homo sapiens 0.026822393660268062 IPFDRDK Unmodified 889.46577 0.46576654 774 A0A0A0MRI1;A0A024RDS7;Q8IXQ4-3;Q8IXQ4-2;Q8IXQ4 GPALPP1;KIAA1704 GPALPP motifs-containing protein 1 yes no 0 0 1 7 0 1 43.886 43.968 3 0.022534 10725 20230619_1887_Aki_TMTPro18x_K_F7 82.241 10.945 76839 61953 67087 69292 87124 83332 74439 77597 91768 64894 77634 72142 71465 59278 78234 78333 82939 64710 70970 56790 69250 69581 88522 83118 76331 79320 91861 66533 80028 72537 73460 62554 79688 77659 79184 61673 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81333000 13603 774 12860 26083 20957 20957 1 9606 Homo sapiens 0.016612292089462244 IPFYGSYTEMDPVIIASEGVEK Oxidation (M) 2460.177 0.17704425 1672 A0A7P0PJI2;A0A7I2V5K0;P61011;G3V4F7;G3V480;B4DDS7;P61011-2;A0A7I2V584;A0A7I2V5S0 SRP54 Signal recognition particle 54 kDa protein yes no 0 1 0 6 0 1 63.531 63.58 3 3.2327E-17 19738 20230619_1886_Aki_TMTPro18x_K_F6 156.39 142.37 38057 31910 34760 41551 41720 41717 45089 39202 45509 38698 37849 39283 36119 31324 41095 44369 36138 35178 35171 29291 35729 41158 42837 42124 45258 40238 46023 39164 39148 39592 37158 33244 41447 43857 34618 33513 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30784000 13604 1672 12861 26084 20958 20958 1088 1 9606 Homo sapiens 0.005362811843951931 IPFYGSYTEMDPVIIASEGVEK Unmodified 2444.1821 0.18212963 1672 A0A7P0PJI2;A0A7I2V5K0;P61011;G3V4F7;G3V480;B4DDS7;P61011-2;A0A7I2V584;A0A7I2V5S0 SRP54 Signal recognition particle 54 kDa protein yes no 0 0 0 6.5 0.5 1 1 64.904 64.94 3 9.46E-31 20316 20230619_1886_Aki_TMTPro18x_K_F6 205.62 190.93 33116 24458 40574 38425 32602 41141 41216 38311 37306 55257 49495 48862 56258 46937 46315 58806 49133 60101 30659 22510 40472 37682 34726 41304 40961 39790 38801 54712 50499 49826 56716 49126 47501 58937 47058 57031 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158780000 13605 1672 12861 26085;26086 20959;20960 20959 2 9606 Homo sapiens 0.017805850470267615 IPGEETDTIQHMR Oxidation (M) 1541.7144 0.71440603 337 A0A024R5F4;P50416;B2RAQ8;P50416-2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 1 0 2 0 1 37.826 37.889 3 0.0011027 8878 20230619_1881_Aki_TMTPro18x_K_F2 79.639 67.93 81873 68981 70360 80167 96307 96525 105670 102360 125100 107370 110500 114920 120360 103630 99058 133600 133270 117330 75632 63245 72890 80271 98198 96532 106540 104290 125730 108510 114500 115980 121580 108810 103180 132760 127070 111670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122920000 13606 337 12862 26087 20961 20961 199 1 9606 Homo sapiens -0.034782601271899694 IPGEETDTIQHMR Unmodified 1525.7195 0.7194914 337 A0A024R5F4;P50416;B2RAQ8;P50416-2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 0 3 0 1 42.814 42.88 3 3.0623E-60 10848 20230619_1882_Aki_TMTPro18x_K_F3 276.73 257.09 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13607 337 12862 26088 20962 20962 1 9606 Homo sapiens -0.022339562645811384 IPGGIIEDSCVLR Unmodified 1427.7442 0.74424959 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2;E9PRC8;Q5SZX6;E9PQ35 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 5.5 0.5 1 1 58.562 58.623 2 8.5479E-21 17327 20230619_1885_Aki_TMTPro18x_K_F5 224.68 174.32 353040 287410 302370 334090 270330 326380 332490 294280 324420 376090 328620 338060 406520 292530 326020 432840 380060 388120 326050 263550 311110 333480 285260 329920 331410 305220 331540 374470 340430 343420 408290 310900 336510 429850 363170 369090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1404300000 13608 2435 12863 26089;26090 20963;20964 20963 2 9606 Homo sapiens 0.04748723608804539 IPGIIIAASAVR Unmodified 1179.7339 0.7339429 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;B1AHB2;B1AHA9 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 6 0 1 62.329 62.381 3 0.00018692 19186 20230619_1886_Aki_TMTPro18x_K_F6 85.288 71.513 18862 17083 20292 17257 13519 21196 18796 21869 24511 12254 12239 14031 14931 9015.2 14939 20296 14897 15755 17463 15639 20381 17485 14775 21138 18832 22028 24116 12969 13268 14016 15137 10069 15219 19940 14259 15009 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33294000 13609 2188 12864 26091 20965 20965 1 9606 Homo sapiens 0.15126528736550426 IPGLLGVFQK Unmodified 1070.6488 0.64881629 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DS32 CSE1L Exportin-2 yes no 0 0 0 6 0 1 63.675 63.721 3 0.00050832 19795 20230619_1886_Aki_TMTPro18x_K_F6 101.64 76.084 90300 56556 72317 84332 56132 81265 81018 87971 121250 98312 84837 109460 140490 115810 75870 185930 152130 150410 83238 52057 74812 82813 60528 82478 81478 89680 119790 99217 91275 110940 138640 122910 83103 183360 144810 143240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192870000 13610 1462 12865 26092 20966 20966 1 9606 Homo sapiens 0.11631783270763663 IPGSPPESMGR Oxidation (M) 1142.539 0.53900784 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q5SX87;Q5SX86;V9GYF8;Q5SX90;V9GYJ7 GDI2 Rab GDP dissociation inhibitor beta yes no 0 1 0 5.25 0.829 1 1 2 38.864 38.941 2 0.066091 9012 20230619_1885_Aki_TMTPro18x_K_F5 57.708 32.571 127000 92607 103680 118170 123780 140100 115340 121790 165430 144820 172390 188630 172250 149470 129210 195460 198490 197230 117170 85033 107650 117490 126950 139570 118360 126300 165890 146510 176560 188200 173850 157850 136340 195570 189230 187320 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 297240000 13611 2533 12866 26093;26094;26095;26096 20967;20968 20967 1540 2 9606 Homo sapiens -0.026560101307495643 IPGSPPESMGR Unmodified 1126.5441 0.54409322 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q5SX87;Q5SX86;V9GYF8;Q5SX90;V9GYJ7 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 0 5.5 0.5 1 1 43.422 43.509 2 0.00072837 10928 20230619_1886_Aki_TMTPro18x_K_F6 125.57 107.53 57469 44845 50530 58140 52505 68280 56248 64067 81909 83628 85645 89642 96138 80279 64522 92506 104300 102610 53072 41173 51993 57740 54631 68146 57311 66234 82169 83661 88127 90395 96312 83790 68513 93243 99400 97358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309290000 13612 2533 12866 26097;26098 20969 20969 1 9606 Homo sapiens -0.01411706268117996 IPHDFGLR Unmodified 953.5083 0.50830006 2011 G3V167;A8K214;Q9UGN5-2;Q9UGN5;B4DV82 PARP2 Poly [ADP-ribose] polymerase 2 yes no 0 0 0 8 0 1 46.302 46.341 3 0.00020391 11994 20230619_1888_Aki_TMTPro18x_K_F8 157.58 106.01 48348 37927 39942 48633 39310 50619 42993 45982 46873 48864 43334 42169 53425 44505 44146 47499 48389 48047 44630 34817 41322 48244 41062 50908 43272 47370 47433 49030 45060 43191 53760 46005 45304 47711 46255 45630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62455000 13613 2011 12867 26099 20970 20970 1 9606 Homo sapiens 0.029686243371884302 IPHGVSGVQDR Unmodified 1163.6047 0.60471964 4008 Q53SW3;Q9BPU6 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 6.5 0.5 1 1 35.942 36.006 3 5.5004E-09 7931 20230619_1886_Aki_TMTPro18x_K_F6 173.24 131.79 39128 38539 45474 42111 34782 36021 34423 36479 38746 43446 50564 48864 46400 42555 41822 45490 53804 47381 36275 35295 45470 42185 36934 36926 34918 37437 39710 43686 51123 49147 47297 44245 43287 45768 51319 45006 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 423070000 13614 4008 12868 26100;26101 20971 20971 1 9606 Homo sapiens 0.029461471064678335 IPIFSAAGLPHNEIAAQICR Unmodified 2177.1415 0.14154264 1233 A0A140VK65;P21281;Q59HF3;B4DFM5;Q71UA2;B4DWH7;C9JL73;P15313;C9JNS9 ATP6V1B2;ATP6B1;ATP6V1B1 V-type proton ATPase subunit B, brain isoform;V-type proton ATPase subunit B, kidney isoform yes no 0 0 0 4 0 1 61.3 61.304 3 1.3083E-11 18862 20230619_1883_Aki_TMTPro18x_K_F4 137.61 116.05 86807 74539 86096 103830 72617 93695 90384 82138 112110 96861 87872 92282 106140 89809 74657 97446 103790 122500 80287 68464 87438 102260 77109 95202 90760 85178 112010 97027 92089 93773 106280 93188 78206 99128 99150 116020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 302340000 13615 1233 12869 26102 20972 20972 1 9606 Homo sapiens 0.10005753028599429 IPILLIQQPGK Unmodified 1218.77 0.76999406 4347 Q99575;Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 0 5 0 1 62.923 62.969 3 0.020313 19268 20230619_1885_Aki_TMTPro18x_K_F5 60.102 43.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13616 4347 12870 26103 20973 20973 1 9606 Homo sapiens 0.1693598591339196 IPILSTFLTAR Unmodified 1230.7336 0.73360855 4651 Q9UBB6-2;Q9UBB6;C9J5H8 NCDN Neurochondrin yes no 0 0 0 8 0 1 65.173 65.192 2 0.0086296 20039 20230619_1888_Aki_TMTPro18x_K_F8 76.85 30.284 22131 19650 21182 25770 18889 24405 23223 23460 31728 28172 36590 38719 30919 39716 25375 39302 39123 32262 20468 18035 21595 25495 19963 24750 23434 24171 32000 28559 37065 38871 31578 40826 26736 39078 37252 30743 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44160000 13617 4651 12871 26104 20974 20974 1 9606 Homo sapiens 0.1274710901668641 IPISLETQAHIQECK Unmodified 1765.9033 0.90326943 2477 B4DFZ1;Q53HA8;Q9GZU1 MCOLN1 Mucolipin-1 yes no 0 0 0 7 0 1 52.193 52.267 3 5.3812E-06 14594 20230619_1887_Aki_TMTPro18x_K_F7 117.08 96.974 38966 30751 37147 43677 35380 38431 45502 41194 42687 44362 38412 39428 45452 31114 33052 41514 39921 32960 36009 28260 37904 42964 37141 39316 45196 42001 43506 44498 39921 39956 45530 32945 34250 41052 38082 31422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38125000 13618 2477 12872 26105 20975 20975 1 9606 Homo sapiens 0.05095392446310143 IPKEEQEETSAIR Unmodified 1528.7733 0.77330111 2096 B3KM89;A8K6V0;O94855;O94855-2;E9PDM8;Q49AI3;E9PC44;Q4W5D3 SEC24D Protein transport protein Sec24D yes no 0 0 1 2.5 0.5 1 1 41.346 41.414 3 8.1098E-08 10216 20230619_1882_Aki_TMTPro18x_K_F3 155.06 126.11 146820 114680 149280 159610 208060 201470 228840 204630 192310 189030 175520 120120 129680 84413 169690 77787 80492 53115 135740 105370 152410 158020 211630 200640 228270 208380 197350 189710 178610 123830 135390 88049 166420 77243 77687 50811 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98001000 13619 2096 12873 26106;26107 20976 20976 1 9606 Homo sapiens 0.03006539438820255 IPLLIGGATTSK Unmodified 1169.702 0.70197407 1636 A0A7P0TAV2;A0A6Q8PGK3;A0A7P0T9G7;B7ZLW8;Q99707;B4DST3;Q99707-2;Q6MZH4;B1ANE3 MTR;DKFZp686A22123 Methionine synthase yes no 0 0 0 5 0 1 61.539 61.587 3 0.042787 18585 20230619_1885_Aki_TMTPro18x_K_F5 55.578 43.985 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13620 1636 12874 26108 20977 20977 1 9606 Homo sapiens 0.12391116262733703 IPLNTEQK Unmodified 941.5182 0.51819605 3143 J3QL54;Q9BW27-3;Q9BW27;J3KT10;Q9BW27-2;F5H0W7;B3KW81;J3QLD4;J3QLH0 NUP85 Nuclear pore complex protein Nup85 yes no 0 0 0 7 0 1 46.297 46.384 2 0.015353 11918 20230619_1887_Aki_TMTPro18x_K_F7 93.166 26.134 88305 56230 79984 87899 85174 99434 83924 86107 105390 104670 108230 107430 119200 99785 96231 103890 122800 118090 81477 51783 82066 86260 88128 99316 85382 89383 106300 104890 111360 108650 120220 103440 99759 105120 117210 112030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80055000 13621 3143 12875 26109 20978 20978 1 9606 Homo sapiens 0.04509767551905952 IPLSQEEITLQGHAFEAR Unmodified 2038.0484 0.048353761 1146 Q68D27;E9PHF7;A0A0S2Z693;Q96RQ3;B4DH16;G5E9X5;B4DHW5;E9PG35 DKFZp686B20267;MCCC1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes no 0 0 0 5.5 0.5 1 1 55.619 55.689 3 1.2305E-13 16148 20230619_1885_Aki_TMTPro18x_K_F5 148.52 119.03 28548 22926 29489 33078 25543 33448 33542 30089 39209 41974 41190 42948 44096 33344 38566 45550 43230 47000 26402 21071 29849 32560 27101 33697 33529 31305 39718 41809 42303 43221 44623 35380 39611 45635 41343 44611 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59391000 13622 1146 12876 26110;26111 20979 20979 1 9606 Homo sapiens 0.07085151846990811 IPLVPENLLK Unmodified 1134.7012 0.70124579 747 A0A024RD36;Q6DKI1;B7Z4G0;R4GMU7;Q6DKI1-2 RPL7L1 60S ribosomal protein L7-like 1 yes no 0 0 0 2 0 1 63.074 63.083 3 0.0010826 19998 20230619_1881_Aki_TMTPro18x_K_F2 102.06 50.716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13623 747 12877 26112 20980 20980 1 9606 Homo sapiens 0.13928321613684602 IPMFIVHK Unmodified 983.56264 0.56264382 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 5 0 1 56.454 56.516 3 0.0011341 16472 20230619_1885_Aki_TMTPro18x_K_F5 105.95 72.151 65102 63957 67489 67481 58575 81680 80116 82103 100060 61201 51253 42846 52553 48277 71961 57281 61767 49664 60292 58557 68258 68087 62277 81497 80116 83260 98744 62497 54932 44564 54562 50089 72183 57046 59113 47297 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56231000 13624 3598 12878 26113 20981 20981 1 9606 Homo sapiens 0.07020500164389887 IPNIYAIGDVVAGPMLAHK Unmodified 1978.071 0.071003459 425 B4DFL1;E9PEX6;B4DMK9;A0A024R713;P09622;P09622-2;P09622-3 DLD Dihydrolipoyl dehydrogenase;Dihydrolipoyl dehydrogenase, mitochondrial yes no 0 0 0 4 0 1 63.621 63.629 3 9.458E-11 19899 20230619_1883_Aki_TMTPro18x_K_F4 139.9 113.17 31680 27124 28384 36265 29102 29144 34483 40496 28452 41844 39401 34776 47407 33504 26968 41623 40796 41020 29276 24902 29164 35778 30277 30275 34300 40605 29831 41953 40206 35601 47114 35073 28626 41618 38901 38967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58181000 13625 425 12879 26114 20982 20982 1 9606 Homo sapiens 0.12109079710899096 IPNPDFFEDLEPFR Unmodified 1734.8253 0.82533668 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2 CANX Calnexin yes no 0 0 0 5 0.816 1 1 1 65.175 65.207 3 7.8155E-12 20254 20230619_1885_Aki_TMTPro18x_K_F5 180.84 168.42 10482 9589.2 9039.2 10734 10063 11865 12294 12439 14372 12782 13802 16519 17484 13123 11432 20463 22820 20999 9688.4 8786.1 9330.9 10763 10443 11925 12328 12678 14499 13014 14360 16492 17443 14043 12408 20443 21711 19946 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29986000 13626 1700 12880 26115;26116;26117 20983 20983 1 9606 Homo sapiens -0.012682971474305305 IPNTVEEAVR Unmodified 1126.5982 0.59823728 3829 Q12996;B4DMA4;E9PLP8;B4DFQ5;H0YE74 CSTF3 Cleavage stimulation factor subunit 3 yes no 0 0 0 4 0 1 48.28 48.32 2 0.005173 13195 20230619_1883_Aki_TMTPro18x_K_F4 96.957 66.288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13627 3829 12881 26118 20984 20984 1 9606 Homo sapiens 0.04000209155083212 IPPLFPQK Unmodified 938.55894 0.55893865 2414 B3KTJ9;Q8N163-2;Q8N163;H0YC69;E5RFJ3;H0YC58 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 4 0 1 59.693 59.695 2 0.0073945 18197 20230619_1883_Aki_TMTPro18x_K_F4 107.74 70.724 46129 34369 38096 47761 42129 69632 47052 47898 59235 43035 48280 48681 59061 52443 47555 64473 60638 61428 42569 31584 39518 47369 43798 68171 47522 50300 59171 43993 50517 49347 59425 54590 49374 64374 57897 58374 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38068000 13628 2414 12882 26119 20985 20985 1 9606 Homo sapiens 0.08720153662181929 IPQAIAQLSK Unmodified 1067.6339 0.63389451 1508 Q9BTT5;A0A3B3ISG8;Q16795;A8K4V2 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 3.5 0.5 1 1 58.995 59.01 3 0.013878 18047 20230619_1882_Aki_TMTPro18x_K_F3 70.977 38.756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13629 1508 12883 26120;26121 20986;20987 20986 2 9606 Homo sapiens 0.10278291402732975 IPQSTLSEFYPR Unmodified 1436.73 0.72997974 1233 A0A140VK65;P21281;B4DFM5;B4DQI9 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 1 0 1 59.365 59.365 2 0.0040599 18234 20230619_1880_Aki_TMTPro18x_K_F1 86.014 46.866 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13630 1233 12884 26122 20988 20988 1 9606 Homo sapiens 0.029083944521744343 IPSAVGYQPTLATDMGTMQER 2 Oxidation (M) 2297.0668 0.066782296 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079;F8W0P7;H0YI37 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 2 0 6 0.816 1 1 1 52.936 53.009 3 0.004091 15205 20230619_1886_Aki_TMTPro18x_K_F6 62.823 58.019 71017 61550 81675 86354 87440 83171 85801 83782 88741 91249 114460 102240 101170 88522 97176 121750 94297 103860 65774 56537 82178 85112 90175 84381 86743 85782 91245 92139 115560 102950 103480 93470 98874 120740 90317 98797 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 257620000 13631 3391 12885 26123;26124;26125 20989;20990 20989 2002;2003 2 9606 Homo sapiens -0.0298684235563087 IPSAVGYQPTLATDMGTMQER Oxidation (M) 2281.0719 0.071867674 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079;F8W0P7;H0YI37 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 1 0 6.5 0.5 1 1 56.033 56.099 3 5.903E-05 16575 20230619_1887_Aki_TMTPro18x_K_F7 76.492 67.471 102500 59081 107890 157900 100080 124630 140130 153100 153460 135910 120490 126320 136680 109330 132490 173200 144130 162800 94642 54926 109380 150660 105730 128970 139380 154000 154250 137960 125950 128190 138780 116740 135670 172290 137920 154670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1030399999.9999999 13632 3391 12885 26126;26127 20991;20992 20992 2002;2003 2 9606 Homo sapiens -0.017425384929993015 IPSAVGYQPTLATDMGTMQER Unmodified 2265.077 0.076953052 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079;F8W0P7;H0YI37 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 7.5 0.5 1 1 60.103 60.145 3 1.8451E-23 17861 20230619_1888_Aki_TMTPro18x_K_F8 191.64 170.98 113280 83266 106300 108700 76470 118070 110960 109420 130350 138300 127640 136880 155260 119650 126100 160670 160940 172540 104630 76471 108180 107800 83020 118390 110510 113150 131660 138180 132340 138430 156150 126250 130850 161340 153730 163710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 693320000 13633 3391 12885 26128;26129 20993;20994 20994 2 9606 Homo sapiens -0.004982346303677332 IPSEQEQLR Unmodified 1098.5669 0.56693715 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A8A5YP40;A0A994J773;A0A8A5YP91;A0A8A5YQV3;A0A8A5YNF9;A0A8A5YNG5;A0A994J597 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 2.5 0.5 1 1 40.745 40.811 2 0.00079254 9974 20230619_1882_Aki_TMTPro18x_K_F3 123.21 78.186 185590 121660 199920 220610 278840 276720 229390 262310 268260 222910 297950 306170 267210 253520 256930 214010 327920 288670 171510 112250 203160 215210 281820 275120 235480 267830 272090 229970 303000 305170 273420 261090 265090 220060 312800 273530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187540000 13634 462 12886 26130;26131 20995 20995 1 9606 Homo sapiens 0.02159636120995856 IPSISDLK Unmodified 871.50148 0.50148335 2867;2868 E5KND5;Q96RP9;Q96RP9-2;C9IZ01;D3DNL3;F8WAU4;A0A0S2Z5W5;Q9H9M0;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 0 1 0 1 57.77 57.77 3 0.0068587 17582 20230619_1880_Aki_TMTPro18x_K_F1 86.833 36.129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13635 2867;2868 12887 26132 20996 20996 1 9606 Homo sapiens 0.0605926666595451 IPTEAPQLELK Unmodified 1237.6918 0.69180331 4077 Q5VW32-2;Q5VW32;B7Z1V1 BROX BRO1 domain-containing protein BROX yes no 0 0 0 6 0 1 57.281 57.353 3 0.00013408 17012 20230619_1886_Aki_TMTPro18x_K_F6 113.63 88.156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13636 4077 12888 26133 20997 20997 1 9606 Homo sapiens 0.08246508537490627 IPTGQEYAAK Unmodified 1076.5502 0.55022446 1836 E9PBG7;Q13557-6;A0A994J5B0;D6R938;A0A8V8TNA7;A0A8V8TN65;A0A8V8TND4;Q13557-10;Q13557-8;E9PF82;Q13557-11;Q13557;B7Z2B0;A0A8V8TPK3;Q13557-3;A0A8V8TN88;A0A994J516;A0A8V8TN60;A0A8V8TPY4;A0A8V8TPJ8;A0A8V8TNA1;A0A994J7X8;Q13557-12;Q13557-5;Q13557-9;Q13557-4;A0A8V8TPM4;Q4G1A8;A0A8V8TNN9;A0A8V8TNN4;A0A8V8TNR6;A0A8V8TQ10 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 7 0 1 45.809 45.897 2 0.0020717 11705 20230619_1887_Aki_TMTPro18x_K_F7 106.4 59.318 48890 43868 51228 39180 50238 59025 54528 50996 71718 70160 78565 86090 75331 71930 75723 77805 91811 92188 45253 40123 51762 40274 52425 58023 55268 53154 72350 70380 80198 86154 77074 74950 77891 78895 87691 87407 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50737000 13637 1836 12889 26134 20998 20998 1 9606 Homo sapiens 0.015011352350256857 IPTISTQLK Unmodified 999.59645 0.59644637 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4DKC9;B4DTM7 VCL;HEL114 Vinculin yes no 0 0 0 3 0 1 54.922 54.968 2 1.0784E-05 16383 20230619_1882_Aki_TMTPro18x_K_F3 171.99 96.775 63247 51528 59264 68387 92614 90755 97139 86193 105350 54992 52201 43205 48852 38776 66755 47217 47771 42467 58451 47312 61102 67949 93587 89973 97820 87542 104590 56987 55904 44295 50803 40610 66408 47116 45853 40405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67739000 13638 51 12890 26135 20999 20999 1 9606 Homo sapiens 0.09663200137129024 IPTPLNTSGVQVICMK Oxidation (M) 1772.9165 0.91647665 853 Q96CW1;Q96CW1-2;A0A087WY71;B4E304;E9PFW3;B4DNB9;C9JPV8;C9JGT8;B4DJB1;C9JJD3;H7C4C3;B4DFM1;C9JTK4;A0A8I5KWD3;B4DTI4;B7Z4N2 AP2M1 AP-2 complex subunit mu yes no 0 1 0 3.5 0.5 1 1 59.397 59.413 3 1.5416E-08 18129 20230619_1882_Aki_TMTPro18x_K_F3 136.81 114.6 29949 23909 30329 30096 22549 24161 26607 26377 31728 28910 36791 38374 41676 31058 34548 41289 36302 37558 27692 21942 30654 29817 24146 24939 26773 26882 32216 29370 37727 38298 42007 32824 35391 41100 34725 35708 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33082000 13639 853 12891 26136;26137 21000 21000 502 1 9606 Homo sapiens 0.060935072340043916 IPTPVIHTK Unmodified 1004.6019 0.6018661 3442 P12532;P12532-2 CKMT1A Creatine kinase U-type, mitochondrial yes no 0 0 0 2.5 0.5 1 1 45.407 45.486 3 0.00022588 12011 20230619_1882_Aki_TMTPro18x_K_F3 122.96 75.66 183700 143600 168930 177610 126830 145700 166270 144950 193320 204350 239080 256080 241990 211640 225220 239210 272850 258330 169700 131780 172250 176180 136240 149770 166260 149900 197210 204900 243380 256050 246150 221190 232010 240990 260500 245210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 584970000 13640 3442 12892 26138;26139 21001 21001 1 9606 Homo sapiens 0.09974923719607887 IPVENILGEVGDGFK Unmodified 1585.8352 0.83517309 4531 Q9H845;Q9H9W4;H0Y8Z9;Q9BUX5;A0A7P0T8U3;A0A7P0T871;A0A7P0T7Z1;A0A7P0TB58;A0A7P0T9N9;Q59FN3 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 0 6.67 0.471 1 2 64.473 64.511 3 7.8411E-08 20113 20230619_1886_Aki_TMTPro18x_K_F6 133.66 113.55 86028 75772 84633 94313 76649 92282 97269 99035 95969 89419 111740 112360 121460 106720 114280 117110 106430 126540 79575 69506 86045 93702 80835 93603 96876 100480 98416 91582 114350 112890 123310 110800 115930 118040 102050 120020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 286870000 13641 4531 12893 26140;26141;26142 21002;21003;21004 21003 3 9606 Homo sapiens 0.06568890857920451 IPVFDAGHER Unmodified 1139.5724 0.57235688 2571 B4DQG8;Q9NPF5;Q5TG38;Q5TG39;Q5TG40 DMAP1 DNA methyltransferase 1-associated protein 1 yes no 0 0 0 5 0.816 1 1 1 44.919 44.99 3 7.1378E-06 11730 20230619_1883_Aki_TMTPro18x_K_F4 157.75 141.4 70519 54538 62223 76599 76933 91708 79505 77360 92769 65952 73024 70714 74283 59923 72279 70166 68564 63367 65122 50118 64220 75688 78905 91215 80394 79733 92887 67471 75901 71232 75655 62709 73315 69985 65602 60277 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 82269000 13642 2571 12894 26143;26144;26145 21005;21006;21007 21005 3 9606 Homo sapiens 0.008153597034606719 IPVGPETLGR Unmodified 1037.5869 0.58694431 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 7 0.816 1 1 1 50.28 50.358 2 0.00036455 13686 20230619_1887_Aki_TMTPro18x_K_F7 129.42 77.567 1462000 1192600 1315200 1379600 1370300 1529100 1530700 1612200 1768600 1722300 1770000 1753800 1912600 1563000 1598900 1968300 1760500 1884500 1350700 1093500 1349500 1380400 1424000 1537000 1541800 1643800 1788600 1735600 1821800 1773100 1932200 1640200 1642400 1965700 1683800 1790300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2727000000 13643 3391 12895 26146;26147;26148 21008;21009;21010 21009 3 9606 Homo sapiens 0.06965431851631365 IPVHPNDHVNK Unmodified 1268.6626 0.66256887 3406 P07954-2;A0A804HI24;A0A0S2Z4C3;P07954;A0A804HKE6 FH Fumarate hydratase, mitochondrial yes no 0 0 0 7 0 1 36.596 36.663 4 5.6412E-05 7929 20230619_1887_Aki_TMTPro18x_K_F7 134.98 112.26 432540 286650 419620 476080 603680 637280 578570 579320 634970 544940 601110 716260 645720 546730 544170 565800 730900 687520 399390 264140 430490 466950 611590 630580 586400 594860 642210 557860 621020 713110 652960 570620 565500 575080 697210 651880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1267100000 13644 3406 12896 26149 21011 21011 1 9606 Homo sapiens 0.03898409031899064 IPVIIER Unmodified 838.52764 0.52763852 4513;1961 Q9H492;Q9H492-2;H3BTL1;H6UMI0;Q658J6;Q9GZQ8;A6NCE7 MAP1LC3A;MAP1LC3B;DKFZp762B153;MAP1LC3B2 Microtubule-associated proteins 1A/1B light chain 3A;Microtubule-associated proteins 1A/1B light chain 3B;Microtubule-associated proteins 1A/1B light chain 3 beta 2 no no 0 0 0 8 0 1 52.648 52.723 2 0.015107 14708 20230619_1888_Aki_TMTPro18x_K_F8 111.73 61.188 377320 331940 364890 384170 270680 320450 338080 346440 395210 435000 451160 429380 478180 394090 393140 520670 469880 502040 348970 304270 370380 382990 290680 329550 339010 354610 401780 434620 461200 435180 483080 414430 406230 519750 449060 476920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 440660000 13645 4513;1961 12897 26150 21012 21012 1 9606 Homo sapiens 0.1019158062807719 IPVPVQK Unmodified 779.49052 0.49052473 4075 Q5VTL8;A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B yes no 0 0 0 2 0 1 49.948 50.007 2 0.072829 14479 20230619_1881_Aki_TMTPro18x_K_F2 75.915 28.009 177540 124020 133570 163250 157570 210250 157340 167100 284750 193540 217800 311590 297970 281700 163480 390380 397980 448750 163680 113930 139920 162160 162440 207920 162510 174430 279970 198070 230530 310000 295720 297190 182810 393030 378860 425420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69259000 13646 4075 12898 26151 21013 21013 1 9606 Homo sapiens 0.09195909082325215 IPVQALLHLR Unmodified 1158.7237 0.72371257 729 Q0EFC6;B4DYK6;A0A1U9X7R2;A0A024RCR2;P36915;A8MPZ0;Q86Z07;B4DWZ0;A0A140T8Y2;Q96QB8;B7ZAS6;B4DNS8;Q6P458;P36915-2 HSR1;GNL1 Guanine nucleotide-binding protein-like 1 yes no 0 0 0 6 0 1 58.476 58.541 3 0.00036551 17509 20230619_1886_Aki_TMTPro18x_K_F6 109.44 69.896 14764 13784 13033 14358 13541 14267 15934 15256 20740 13531 16240 13985 15064 12380 14608 14031 15537 14569 13651 12621 13400 14460 14095 14465 16069 15475 20646 13795 16807 14134 15389 12914 14910 14107 14850 13836 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55937000 13647 729 12899 26152 21014 21014 1 9606 Homo sapiens 0.15069965801990293 IPVSGPFLVK Unmodified 1055.6379 0.63791725 3211 O00425;F8WD15 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes no 0 0 0 4.67 0.471 1 2 61.531 61.565 2;3 0.00027679 18603 20230619_1885_Aki_TMTPro18x_K_F5 98.048 65.208 192980 169990 196610 207940 185960 208110 216450 224420 242670 189330 214180 218900 220060 185710 226690 225110 222820 229140 178560 155900 199340 206920 194830 210800 217330 227230 244390 194180 221440 219840 224720 194740 230170 225830 213270 217570 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 192430000 13648 3211 12900 26153;26154;26155 21015;21016 21016 2 9606 Homo sapiens 0.11232380896467475 IPVTDEEQTNVPYIYAIGDILEDK Unmodified 2734.3589 0.35890802 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 0 5 0 1 66.182 66.225 3 2.1358E-07 20648 20230619_1885_Aki_TMTPro18x_K_F5 89.721 77.288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13649 682 12901 26156 21017 21017 1 9606 Homo sapiens 0.06110292411085538 IPVTIITGYLGAGK Unmodified 1401.8232 0.82315184 837 Q4V339;Q9BRT8;C9J3G2;A0A0A0MRU4;A0A087X140;A0A0A6YYH9;Q5RIA9;Q5RIA9-3;A0A087WWG3;Q9BRT8-3;Q5RIB0;Q5JTY5-2;Q8IUF1;Q5JTY5;H0Y5V3;F2Z2T4;Q6NVZ8;E7EUZ7;A0A087WYD2;F8WEU0;A0A0B4J2E3;A8K970;Q9BRT8-4;Q9H2J8;Q5RIB5;A0A087WZQ3;Q5JTY2;A0A087WTC0;B4DDF6 CBWD6;CBWD1;CBWD2;CBWD3;CBWD5;CBWD7 COBW domain-containing protein 6;COBW domain-containing protein 1;COBW domain-containing protein 5;COBW domain-containing protein 3;COBW domain-containing protein 2 yes no 0 0 0 6 0 1 64.198 64.244 3 3.5655E-08 20050 20230619_1886_Aki_TMTPro18x_K_F6 113.99 97.734 50865 42411 45807 47203 40919 57413 57076 50232 53848 62501 63862 63040 70130 58701 60809 66390 65518 75441 47001 38870 46912 47422 43410 57098 56507 52154 55473 62518 65323 63824 70921 61126 62293 67082 62711 71522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37327000 13650 837 12902 26157 21018 21018 1 9606 Homo sapiens 0.13831318905408807 IPWSALK Unmodified 813.47487 0.47487467 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4.5 0.5 1 1 59.832 59.859 2 0.029782 18276 20230619_1883_Aki_TMTPro18x_K_F4 89.369 46.246 110890 98447 115830 120820 99153 151990 130600 121690 184930 119100 110100 111810 122430 95031 126540 131830 136580 95450 102630 90291 117100 120560 105570 150510 131460 126360 182130 120460 117050 113300 124760 100510 129170 129860 130300 91196 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237530000 13651 3881 12903 26158;26159 21019 21019 1 9606 Homo sapiens 0.060676225652855464 IPYSDVNIGTGVAHPPR Unmodified 1791.9268 0.92678206 1338 Q9UKM7;A0A291FGE6;A0A804HHU1;H0YG20;A0A804HL65;A0A804HK86;A0A804HJ66;A0A804HL61;B4DR05;A0A804HJ23;A0A804HKS1;A0A804HK01;H0YGQ1;H0YGV7;H0YI64;A0A804HIP1;A0A804HJW0;A0A804HK28;B3KQC5;Q68D80 MAN1B1;DKFZp686C04126 Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase;alpha-1,2-Mannosidase yes no 0 0 0 1 0 1 49.759 49.759 3 1.1581E-18 14267 20230619_1880_Aki_TMTPro18x_K_F1 185.02 164.9 16284 12264 16480 17584 18014 19477 19766 16994 21619 18072 23852 19996 21876 19981 21822 23753 20608 25426 15052 11273 16756 17338 18632 19491 19881 17573 21986 18279 24257 20241 22392 20807 22138 23897 19763 24115 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11822000 13652 1338 12904 26160 21020 21020 1 9606 Homo sapiens 0.06249574275125269 IPYTTVLR Unmodified 961.55967 0.55966693 315 A0A024R4Z6;Q08945;E9PMD4 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 3.5 0.5 1 1 52.429 52.47 2 0.0055634 15119 20230619_1883_Aki_TMTPro18x_K_F4 113.14 55.665 382450 307700 324640 364250 361280 457100 385940 380970 482880 205030 204970 169730 199150 162050 305070 215620 225150 176440 353160 282210 335450 364370 373790 453250 390470 389790 474470 216170 223140 174000 208500 170260 303420 213940 215860 168180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 294410000 13653 315 12905 26161;26162 21021 21021 1 9606 Homo sapiens 0.07734948311235712 IQAAASTPTNATAASDANTGDR Unmodified 2102.9829 0.98285297 2663 P49841-2;P49841;B5BUC0;Q6FI27 GSK3B Glycogen synthase kinase-3 beta yes no 0 0 0 3.5 0.5 1 1 40.325 40.374 3 5.1954E-17 9679 20230619_1883_Aki_TMTPro18x_K_F4 153.19 144.33 36639 22233 32990 36003 41517 41590 37745 38362 46987 44615 53298 52763 52598 48248 44918 58025 60985 56874 33796 20489 33955 35278 42339 41551 38570 39581 47589 45014 54341 53067 53378 50410 46768 58051 58166 54046 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 104560000 13654 2663 12906 26163;26164 21022;21023;21024 21024 3 9606 Homo sapiens -0.024519141366909025 IQAEFEK Unmodified 863.43888 0.43888309 2066 B3KY12;A8K7V1;A8K566;Q12874;Q53HM6;B4DW90 SF3A3 Splicing factor 3A subunit 3 yes no 0 0 0 4.5 0.5 1 1 49.026 49.084 2 0.0212 13371 20230619_1885_Aki_TMTPro18x_K_F5 103.56 36.531 199940 153060 182140 186990 198300 192660 213940 204710 272870 239600 281950 265730 272320 248820 217890 281460 278290 280390 184660 140450 186750 186180 205040 194760 216600 209270 274850 241170 288220 268130 275810 258850 226220 282090 265690 266320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 400640000 13655 2066 12907 26165;26166 21025 21025 1 9606 Homo sapiens 0.0017012059777243849 IQAGDPVAR Unmodified 925.49813 0.49812931 2873 E5KT65;P19388;B4DJ89;A0A087WWX0;A0A087WVZ9;A0A0A0MQR7 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes no 0 0 0 4 0 1 38.087 38.13 2 0.084373 8739 20230619_1883_Aki_TMTPro18x_K_F4 61.582 34.889 49063 35188 50671 58664 69622 66502 59012 66905 68620 57263 70636 69134 68618 58519 61568 54192 78361 59319 45344 32415 51658 57377 70456 66649 60436 68046 69410 58758 72273 69282 69774 60482 63604 54855 74681 56357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155740000 13656 2873 12908 26167 21026 21026 1 9606 Homo sapiens 0.03240016611948704 IQAIAWAR Unmodified 927.52904 0.5290355 3468 P17812;A0A3B3IRI2;B4E1E0;A0A8Q3WKZ7;B4DMB5;P17812-2;A0A8Q3WL40;A0A3B3IRQ8;A0A3B3ITF6 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 4.5 0.5 1 1 53.369 53.415 2 0.0023676 15519 20230619_1883_Aki_TMTPro18x_K_F4 127.84 83.449 317600 290380 287910 277800 265860 335080 296550 296370 373120 186950 170980 126050 146140 117880 248170 181330 185420 130280 293660 265710 294570 282570 279250 333650 299530 302500 367120 193340 183760 130750 154810 125230 246710 178570 177630 124480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 180350000 13657 3468 12909 26168;26169 21027 21027 1 9606 Homo sapiens 0.062372147168503034 IQALQQQADEAEDR Unmodified 1613.7645 0.76452734 3746 P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1;A0A590UK79;A0A590UJB9 TPM4;HEL-S-108 Tropomyosin alpha-4 chain yes no 0 0 0 1.8 0.748 2 2 1 48.61 48.652 2;3 2.6968999999999997E-28 13814 20230619_1880_Aki_TMTPro18x_K_F1 250.51 223.91 242630 228320 263380 283950 306100 259270 306310 331850 372310 326310 310720 336240 349570 298650 288430 439490 395900 376770 224730 209390 266510 281970 313960 265940 310910 333780 373130 330370 323520 339810 352830 316630 301140 435390 377620 358590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 917380000 13658 3746 12910 26170;26171;26172;26173;26174 21028;21029;21030 21028 3 9606 Homo sapiens -0.017804341976670912 IQALQQQADEAEDRAQGLQR Unmodified 2267.1254 0.12543488 3746 P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1;A0A590UK79;A0A590UJB9 TPM4;HEL-S-108 Tropomyosin alpha-4 chain yes no 0 0 1 4 0 1 52.919 52.939 3 1.1379000000000002E-25 15325 20230619_1883_Aki_TMTPro18x_K_F4 191.64 174.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13659 3746 12911 26175 21031 21031 1 9606 Homo sapiens 0.042557183253393305 IQASTMAFK Oxidation (M) 1011.5059 0.5059168 1438 A0A384MTL2;P37802;P37802-2;X6RJP6 TAGLN2 Transgelin-2 yes no 0 1 0 1.5 0.5 1 1 47.148 47.186 2 0.0018055 13139 20230619_1881_Aki_TMTPro18x_K_F2 107.08 87.292 238850 201750 187850 198870 236880 251180 300710 286890 426450 47580 41950 43730 45137 31908 113710 53046 55687 37940 220510 184710 195930 201950 244120 250890 302880 284220 410660 61481 61431 44398 49343 34429 110870 52318 53719 36261 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111340000 13660 1438 12912 26176;26177 21032 21032 926 1 9606 Homo sapiens 0.0006240781721089661 IQASTMAFK Unmodified 995.511 0.51100218 1438 A0A384MTL2;P37802;P37802-2;X6RJP6 TAGLN2 Transgelin-2 yes no 0 0 0 2.5 0.5 1 1 52 52.052 3 0.00032476 15040 20230619_1882_Aki_TMTPro18x_K_F3 105.2 69.684 378710 328000 318780 300250 292270 401180 420040 422980 594780 107890 111910 94761 113870 98729 179450 128750 139750 104410 349850 300090 328480 307210 310170 398410 421030 422090 574970 126450 137650 97350 119530 103270 178830 127720 133850 99556 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 278510000 13661 1438 12912 26178;26179 21033;21034 21034 2 9606 Homo sapiens 0.013067116798310963 IQAYDYLECSAK Unmodified 1459.6653 0.66533057 3723 P62745;B4DMJ8 RHOB Rho-related GTP-binding protein RhoB yes no 0 0 0 6 0 1 56.645 56.717 2 1.7598E-06 16799 20230619_1886_Aki_TMTPro18x_K_F6 171.05 135.64 30131 22810 26869 32502 23659 24856 27915 25545 21880 27406 35038 39203 33242 29670 42658 31623 34941 43187 27823 20966 27548 31913 24922 25730 27733 26135 23164 27934 35308 38924 34424 31026 42728 32429 33563 40866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23504000 13662 3723 12913 26180 21035 21035 1 9606 Homo sapiens -0.04611548416141886 IQCPNQGCEAVYSSVSGLK Unmodified 2095.9667 0.96667432 3013 G3XAG1;Q96ME7-3;Q96ME7;B4DES6;B7Z9P6;Q96ME7-2;Q658M0;B4E0X7 ZNF512;DKFZp666L156 Zinc finger protein 512 yes no 0 0 0 4.5 3.5 1 1 55.669 55.7 3 8.7543E-08 16683 20230619_1880_Aki_TMTPro18x_K_F1 116.82 107.72 94570 74067 94308 95549 89764 106960 107610 96781 108870 96698 82761 98801 112060 96164 97590 105370 114610 134450 87421 67997 95780 94875 94115 107030 107480 99613 109840 97836 87557 100070 112790 99827 100470 107340 109630 127320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 172260000 13663 3013 12914 26181;26182 21036;21037;21038 21036 3 9606 Homo sapiens -0.037470348987426405 IQDEGVVLESEETNQTNK Unmodified 2031.9597 0.95965791 2069 A8K5C3;Q9NW75-2;Q9NW75 GPATCH2 G patch domain-containing protein 2 yes no 0 0 0 1 0 1 52.295 52.295 3 0.0092564 15271 20230619_1880_Aki_TMTPro18x_K_F1 61.648 44.367 22702 18568 21217 25948 19259 23433 25236 26065 30665 17797 18579 20332 20451 18675 25492 21407 23847 22724 20980 17059 21680 25557 20346 23933 25260 26234 30405 18527 19740 20478 21067 19458 25719 21556 22825 21573 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16668000 13664 2069 12915 26183 21039 21039 1 9606 Homo sapiens -0.015043529740069062 IQDEQTTYVFFDNK Unmodified 1746.8101 0.81008055 4461 Q9BX67;Q9BX67-2 JAM3 Junctional adhesion molecule C yes no 0 0 0 5 0.816 1 1 1 60.715 60.752 3 1.2713E-08 18220 20230619_1885_Aki_TMTPro18x_K_F5 150.26 126.42 63148 56026 65078 61836 54399 67560 60279 49823 57597 81206 88878 76652 86159 84998 78313 93055 88788 104900 58436 51333 65770 62062 57545 67491 60396 53004 60157 80251 89515 78356 87717 87809 80439 94000 84962 99453 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254070000 13665 4461 12916 26184;26185;26186 21040 21040 1 9606 Homo sapiens -0.03345208735322558 IQDFNDTFYR Unmodified 1317.599 0.59896556 2301 J3JZZ9;B2RBP3;Q8TBC4;Q8TBC4-2;F8W8D4 UBE1C;UBA3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 5.5 0.5 1 1 55.681 55.751 2 5.574E-14 16130 20230619_1885_Aki_TMTPro18x_K_F5 236.56 220.02 232410 182960 222240 249410 227990 254920 243310 253040 255240 297030 295260 279670 320220 261450 283630 336670 316100 335780 214770 168060 226850 246430 236800 257270 244930 259790 261200 297220 302040 284210 324220 274360 291150 336890 302260 318860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 451080000 13666 2301 12917 26187;26188 21041;21042 21041 2 9606 Homo sapiens -0.047129961958717104 IQDGLGELK Unmodified 971.52876 0.52876073 898 A0A590UJ56;A0A590UJR3;A0A590UJ50;A0A090N7U0;Q13616;A0A590UJ21;B3KTW0;B4DLA3;A0A590UK34;A0A590UJA0;Q75MQ1 CUL1 Cullin-1 yes no 0 0 0 5 0 1 53.505 53.576 2 0.0038724 15290 20230619_1885_Aki_TMTPro18x_K_F5 102.52 26.424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13667 898 12918 26189 21043 21043 1 9606 Homo sapiens 0.041857502063294305 IQDHQVVINCAIPK Unmodified 1633.861 0.86101068 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A075B6E5;A0A0U1RQP7 ENAH Protein enabled homolog yes no 0 0 0 8 0 1 48.281 48.348 3 5.5301E-05 12774 20230619_1888_Aki_TMTPro18x_K_F8 97.45 72.658 117730 78922 93362 105290 95228 109390 103790 109410 138920 138070 136240 130440 159000 138040 111850 183580 166910 159830 108560 72528 96965 104200 99157 110280 105260 112510 139480 137810 140800 133140 159390 144510 118000 182190 159120 152080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 650510000 13668 918 12919 26190 21044 21044 1 9606 Homo sapiens 0.06943461828586805 IQDIVGILR Unmodified 1025.6233 0.62332982 3589 P46087;P46087-4;P46087-2;P46087-3;F5GYR3;F5H5X6 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 2.5 0.5 1 1 62.76 62.78 2 0.053528 19869 20230619_1881_Aki_TMTPro18x_K_F2 69.915 47.955 48362 44507 49749 47562 49961 64398 53688 51137 58369 52273 54352 56455 54096 45467 53228 69897 65718 61579 44764 40762 50424 48018 52047 63529 54067 53189 59028 52913 55966 56785 55195 48540 54923 69327 62729 58591 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35734000 13669 3589 12920 26191;26192 21045 21045 1 9606 Homo sapiens 0.11154308748336916 IQDVGLVPMGGVMSGAVPAAAAQEAVEEDIPIAK Unmodified 3332.6996 0.69961417 2530 B4DLN1;P52815;Q15693 MRPL12 39S ribosomal protein L12, mitochondrial yes no 0 0 0 6.5 0.5 1 1 65.346 65.382 4 1.2204E-15 20498 20230619_1886_Aki_TMTPro18x_K_F6 128.12 121.76 23646 19199 23011 22148 17427 19939 25302 24063 21961 28950 25469 29171 31643 22545 28715 32757 29478 31588 21859 17604 23342 22112 18747 20429 24962 24433 22740 28977 26269 29369 31928 24033 29315 32674 28211 30007 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288920000 13670 2530 12921 26193;26194 21046 21046 1 9606 Homo sapiens 0.1265723467827229 IQDYDVSLDK Unmodified 1194.5768 0.57683314 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 4 0 1 54.146 54.162 2 1.1668E-06 15873 20230619_1883_Aki_TMTPro18x_K_F4 135.99 89.095 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13671 1601 12922 26195 21047 21047 1 9606 Homo sapiens -0.012672206642946549 IQEAGTEVVK Unmodified 1072.5764 0.57643921 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2;G3XAL0 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 4.2 0.748 1 2 2 45.627 45.691 2;3 1.3596E-06 11991 20230619_1883_Aki_TMTPro18x_K_F4 195.27 125.27 471430 310200 379080 464620 521310 517510 481600 497050 601530 485150 584690 593440 574000 526660 543280 472750 652720 600390 434680 285470 395340 456930 529130 518780 491540 508920 604950 494490 600260 595120 585060 542580 558580 483400 623100 569090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1982499999.9999998 13672 297 12923 26196;26197;26198;26199;26200 21048;21049 21048 2 9606 Homo sapiens 0.04305404406522939 IQEEELQR Unmodified 1043.5247 0.52473799 2067 A8K575;Q9NQZ5 STARD7 StAR-related lipid transfer protein 7, mitochondrial yes no 0 0 0 1 0 1 39.574 39.574 2 0.010619 9822 20230619_1880_Aki_TMTPro18x_K_F1 104.17 32.944 20152 12662 15425 18858 20519 21636 18688 20917 27435 21023 23113 31530 28603 20474 28835 24558 29586 30903 18571 11655 16157 18561 20883 21645 19218 21420 27270 21565 24220 31125 29006 21718 29334 24981 28309 29280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186420000 13673 2067 12924 26201 21050 21050 1 9606 Homo sapiens 0.00471660712605626 IQEEGTEVELTGK Unmodified 1431.7093 0.70930387 2768 CON__ENSEMBL:ENSBTAP00000024146 yes yes 0 0 0 1.5 0.5 1 1 50.575 50.601 3 1.3606E-05 14756 20230619_1881_Aki_TMTPro18x_K_F2 104.17 89.814 + 48523 50881 59785 55601 117180 135090 93110 88595 126850 68039 87907 101430 73909 70794 91569 77128 97807 102660 45033 46590 60659 56780 116600 129470 96222 93119 125570 71028 91533 100380 76802 74345 93068 78880 93555 97222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64423000 13674 2768 12925 26202;26203 21051 21051 1 9606 Homo sapiens 0.010717592818537014 IQEENVIPR Unmodified 1096.5877 0.58767259 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;B4DSR0;A0A804HJI0;A0A804HJG8 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 3.5 0.5 1 1 45.189 45.249 2 0.00097582 11814 20230619_1883_Aki_TMTPro18x_K_F4 120.12 63.556 144150 128290 127010 146480 135040 148230 156700 145930 165110 167590 181570 188050 188350 152430 168340 190270 194190 205430 133230 117580 130690 146480 140230 149750 156990 149880 168400 168810 185860 188770 191020 160460 173080 191370 185630 194910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 875030000 13675 1723 12926 26204;26205 21052 21052 1 9606 Homo sapiens 0.04324226500648365 IQEHFNK Unmodified 914.46102 0.46101552 3102 Q9NUU7;I3L0H8;Q9UMR2;Q9UMR2-4;Q9UMR2-2;A0A0U4B4U6;F6QDS0;H3BQK0;Q53G16;Q7Z4W5;Q9HBZ9;Q2NL95;B4DS24;Q69YM2;I3L352;Q68DY7;B4DL69;A0A024QZ90;Q59FQ9;Q9UMR2-3;Q9NUU7-2 DDX19A;DDX19B;DKFZp762C1313;DKFZp686C21137;hCG_1998531 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B yes no 0 0 0 7 0.816 1 1 1 39.295 39.342 3 0.0030037 8975 20230619_1887_Aki_TMTPro18x_K_F7 117.72 67.597 574160 320960 515310 506170 650920 605780 553300 555420 691120 619060 710670 679640 729970 610310 594970 490080 811600 685990 529410 295810 530140 497080 662260 603920 567920 572560 696980 624310 728660 684500 738050 625860 618640 505840 773570 649940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 631490000 13676 3102 12927 26206;26207;26208 21053 21053 1 9606 Homo sapiens 0.0003634506618936939 IQELEDLLAK Unmodified 1170.6496 0.64960415 3482 P20700;E9PBF6;Q6DC98;B4DZT3 LMNB1 Lamin-B1 yes no 0 0 0 5.8 1.17 1 1 1 2 64.334 64.366 2 9.9233E-11 19826 20230619_1887_Aki_TMTPro18x_K_F7 163.66 68.055 366060 310610 319340 374790 314140 365480 304760 261460 274840 381760 413460 415330 429410 391800 429200 425040 384740 476010 338210 284870 328490 372970 326630 367960 307100 277860 287690 380330 418510 419270 437760 406650 434010 429490 369180 451240 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 563970000 13677 3482 12928 26209;26210;26211;26212;26213 21054;21055;21056;21057 21057 4 9606 Homo sapiens 0.07110533129139185 IQELFHVEPGLQR Unmodified 1564.8362 0.83617614 809 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 0 0 0 7.5 0.5 1 1 56.85 56.906 3 0.00083887 16556 20230619_1887_Aki_TMTPro18x_K_F7 87.519 73.1 40038 35665 40886 40816 31526 36162 34213 32355 42630 44882 39534 42513 50857 43829 36747 54720 44495 52080 37049 32688 41314 40749 33581 36849 34623 33675 42870 44629 41209 43312 50887 45743 38145 54611 42550 49466 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 626750000 13678 809 12929 26214;26215 21058 21058 1 9606 Homo sapiens 0.07635150017495107 IQELQASQEAR Unmodified 1271.647 0.64697839 1944 A4D218;Q9Y6D9;Q9Y6D9-4;Q9Y6D9-3 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes no 0 0 0 3 0 1 42.37 42.436 2 7.697E-06 10664 20230619_1882_Aki_TMTPro18x_K_F3 152.64 103.29 40495 32289 37947 40201 40209 47464 44980 40040 55590 46413 52983 55201 56908 41304 52141 60538 61281 60300 37419 29630 38814 40038 41759 47268 45389 41608 55894 46854 54669 55187 57693 44107 53654 60482 58538 57280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63300000 13679 1944 12930 26216 21059 21059 1 9606 Homo sapiens 0.02202077724200535 IQEPNTFPAILR Unmodified 1397.7667 0.76669959 663 F5H4C6;B4DTT0;Q7Z3X3;H7C3P4;A8K6V6;A0A024RBC5;F6S8M0;B4E284;P15586-2;P15586 GNS;DKFZp686E12166 N-acetylglucosamine-6-sulfatase yes no 0 0 0 1 0 1 58.698 58.698 2 1.5901E-12 17970 20230619_1880_Aki_TMTPro18x_K_F1 220.82 169.55 59088 45688 48375 67116 57635 61457 59162 64205 66383 55270 52940 55659 61852 52739 56554 70718 63725 71878 54537 42007 50281 65898 59190 62620 59789 65172 66678 56362 55366 56424 62610 55454 58079 70792 60959 68228 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205260000 13680 663 12931 26217 21060 21060 1 9606 Homo sapiens 0.08372691068757376 IQEQFQK Unmodified 919.47633 0.47633123 2173 Q8IVD9;B0FTY2;A4D2J8 NUDCD3;KIAA1068 NudC domain-containing protein 3 yes no 0 0 0 7 0 1 45.699 45.786 2 0.028548 11666 20230619_1887_Aki_TMTPro18x_K_F7 95.909 28.877 32947 24841 30149 33379 35403 40252 41620 34891 46068 37939 46481 51449 45173 40875 40990 38936 52748 48753 30429 22819 30966 33085 36539 40049 41716 36123 46655 38609 47646 51228 45974 42402 42388 39721 50328 46216 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36016000 13681 2173 12932 26218 21061 21061 1 9606 Homo sapiens 0.013372118633810715 IQESHPELR Unmodified 1107.5673 0.5672715 4537 Q9H9B4 SFXN1 Sideroflexin-1 yes yes 0 0 0 2.5 0.5 1 1 33.982 34.043 3 0.018251 7304 20230619_1881_Aki_TMTPro18x_K_F2 55.806 15.805 151870 87964 227870 219320 345570 311600 241110 282270 219490 159470 296700 304310 188000 210210 353230 101870 254670 216860 140760 81657 226770 211650 345970 307290 248740 287010 227550 172120 296400 299000 203350 214020 349420 111440 244360 204900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363950000 13682 4537 12933 26219;26220 21062 21062 1 9606 Homo sapiens 0.01779055840847832 IQESYGDVYGICTK Unmodified 1631.7501 0.75012283 664 P20020-1;P20020;P20020-4;P20020-6;P20020-2;P20020-5;A0A024RBC7;Q58F24;A0A994J4Z0;F8W1V5 ATP2B1 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase yes no 0 0 0 6.5 0.5 1 1 55.409 55.477 3 3.6252E-13 16196 20230619_1886_Aki_TMTPro18x_K_F6 162.88 132.44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13683 664 12934 26221;26222 21063;21064 21063 2 9606 Homo sapiens -0.04048222670166979 IQETQAELPR Unmodified 1183.6197 0.619701 3892 Q4ZG57;Q14566 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 3.5 0.5 1 1 43.287 43.343 2 3.6389E-05 11012 20230619_1882_Aki_TMTPro18x_K_F3 156.48 107.98 118620 90122 102240 107840 115130 136850 115630 119980 130430 142740 162060 152130 160780 129130 129650 154050 173810 145370 109510 82683 105450 107830 118710 135770 117070 124310 133350 143300 164620 153270 162620 135300 134950 153870 165670 138270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 453140000 13684 3892 12935 26223;26224 21065 21065 1 9606 Homo sapiens 0.035235941837981954 IQEVADELQK Unmodified 1171.6085 0.60846762 3472 P18085;C9JAK5;C9JPM4 ARF4 ADP-ribosylation factor 4 yes no 0 0 0 3.5 0.5 1 1 56.138 56.16 3 0.00016206 16853 20230619_1882_Aki_TMTPro18x_K_F3 120.54 69.451 178030 145490 161980 169320 175180 192660 184290 183740 206860 208560 206620 187060 234070 185470 195770 241660 193080 176200 164490 133410 166120 169380 181210 192870 186010 188960 209550 208820 213050 190970 236080 194320 199850 238180 184640 168110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 856320000 13685 3472 12936 26225;26226 21066;21067 21066 2 9606 Homo sapiens 0.02952772089656719 IQEYCYDNIHFMK Oxidation (M) 1775.7647 0.76472704 4151 Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;Q53FN7;D3DN77 BZW1;hCG_2022736 Basic leucine zipper and W2 domain-containing protein 1 yes no 0 1 0 7 0 1 52.506 52.576 3 0.0013333 14743 20230619_1887_Aki_TMTPro18x_K_F7 75.669 64.763 162360 135290 142340 147970 139790 145850 142720 139870 150270 184490 177130 156970 173310 149320 132630 231200 198840 184420 149990 123980 146220 148430 145460 147600 144040 144510 153920 183170 180110 160520 175150 158560 139790 228080 189510 175710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74314000 13686 4151 12937 26227 21068 21068 2676 1 9606 Homo sapiens -0.09212473793718345 IQEYCYDNIHFMK Unmodified 1759.7698 0.76981241 4151 Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;Q53FN7;D3DN77 BZW1;hCG_2022736 Basic leucine zipper and W2 domain-containing protein 1 yes no 0 0 0 7.5 0.5 1 1 55.456 55.517 3 8.5283E-08 15941 20230619_1887_Aki_TMTPro18x_K_F7 148.7 125.47 117260 91282 109310 99087 77087 103170 104610 105670 106800 149500 116030 104230 158640 119460 87618 170420 145510 134840 108340 83664 111170 99563 83507 104070 104030 108910 109320 147310 120320 108470 157130 125480 93993 168180 138590 128480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192490000 13687 4151 12937 26228;26229 21069 21069 1 9606 Homo sapiens -0.07968169931086777 IQFDEGYDNYPGQEK Unmodified 1801.7795 0.7795087 4303 Q92665 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 0 0 0 3.5 0.5 1 1 54.744 54.79 3 0.00042706 16269 20230619_1882_Aki_TMTPro18x_K_F3 87.566 76.621 28371 26185 28627 27652 28742 33980 34772 36033 40914 36539 35387 38716 37845 34460 37301 41329 38896 45453 26257 23979 29063 27909 30029 33930 34899 36669 41107 36971 36704 39057 38541 36047 38052 41640 37245 43104 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22948000 13688 4303 12938 26230;26231 21070;21071 21070 2 9606 Homo sapiens -0.08930987120311329 IQFENNEDQDVNPLK Unmodified 1801.8483 0.84825697 1618 O95163;B4E3I9;A0A6Q8PHC9;Q4LE38;Q8N516;A0A6Q8PFH9;F5H2T0;B3KXE7;A0A6Q8PF66;A0A6Q8PGW3;A0A6Q8PHF4;A0A6Q8PG86;A0A6Q8PEX6;A0A6Q8PFB7;A0A6Q8PHI5;A0A6Q8PH48;Q68DI5;A0A6Q8PFN8;A0A6Q8PHA0;A0A6Q8PGR0;A0A6Q8PF69 IKBKAP;IKBKAP variant protein;DKFZp781H1425 Elongator complex protein 1 yes no 0 0 0 3.5 0.5 1 1 56.196 56.218 3 1.5578E-07 16860 20230619_1882_Aki_TMTPro18x_K_F3 121.79 110.02 58699 49096 58027 54024 58146 66839 63891 63473 72789 65855 66867 63905 71620 60024 67296 76234 74118 73837 54280 44992 58984 54354 60569 66545 64370 65126 73408 66388 69079 64869 72743 62908 68933 76188 70848 70158 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 160290000 13689 1618 12939 26232;26233 21072;21073 21072 2 9606 Homo sapiens -0.020593228206507774 IQFKPDDGISPER Unmodified 1500.7573 0.75725712 507 A0A024R8A7;Q96I24 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 0 0 1 5.5 0.5 1 1 48.249 48.327 3 1.1633E-07 13155 20230619_1886_Aki_TMTPro18x_K_F6 148.57 116.51 584090 478560 530380 576170 546740 686270 628620 636550 726960 708980 645020 702430 705570 620930 676110 776510 717620 778690 539690 438960 543910 575300 569680 684270 632100 655550 732030 712510 668790 710480 717020 651370 690900 777650 686640 739350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 510260000 13690 507 12940 26234;26235 21074;21075 21075 2 9606 Homo sapiens 0.026908779925406634 IQFKPDDGTTPER Unmodified 1502.7365 0.73652168 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31 FUBP1 Far upstream element-binding protein 1 no no 0 0 1 4 0.816 1 1 1 44.612 44.678 3 2.9407E-06 11457 20230619_1885_Aki_TMTPro18x_K_F5 137.39 114.51 565580 431810 469140 538850 586650 616290 566910 570310 623200 607890 607040 574630 648300 539900 563470 710630 618190 590550 522020 396330 486730 536310 599550 616350 574490 586760 631300 611410 625150 584060 656280 566990 578300 704260 590760 562280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2301300000 13691 2644;4322 12941 26236;26237;26238 21076;21077 21077 2 9606 Homo sapiens 0.00526287612865417 IQFVGACNPPTDPGR Unmodified 1627.7777 0.77767498 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 8 0 1 50.689 50.765 2 3.2889E-07 13846 20230619_1888_Aki_TMTPro18x_K_F8 131.43 119.59 30719 30219 33848 36992 29169 35135 35803 36227 32071 47828 42599 46647 52448 48210 36860 60995 56385 58862 28465 27705 34077 36780 30843 35693 35624 37247 33388 47652 43658 47468 52517 50339 38968 60894 53777 55921 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58433000 13692 3881 12942 26239 21078 21078 1 9606 Homo sapiens -0.011102746193046187 IQGDLAGR Unmodified 828.44537 0.44536545 4461 Q9BX67 JAM3 Junctional adhesion molecule C yes yes 0 0 0 4.5 0.5 1 1 39.064 39.131 2 0.015378 9194 20230619_1883_Aki_TMTPro18x_K_F4 93.143 13.431 77030 49442 89132 87560 113020 130030 88650 104410 120860 94071 123320 124440 126350 101740 105590 76270 141060 125370 71225 45607 89880 85774 114920 127590 91857 108100 121310 96612 126520 124110 127850 104440 109510 79911 134510 118620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133780000 13693 4461 12943 26240;26241 21079 21079 1 9606 Homo sapiens 0.02428058549128309 IQGIEEYKK Unmodified 1106.5972 0.59717465 4757 Q9Y6G9;Q6MZE7;C9JGM7;C9JLW1 DYNC1LI1;DKFZp686A1525 Cytoplasmic dynein 1 light intermediate chain 1 yes no 0 0 1 8 0 1 47.738 47.796 3 0.016641 12591 20230619_1888_Aki_TMTPro18x_K_F8 67.113 38.386 155080 125140 138000 163800 156090 163500 164980 166480 194850 209900 210880 226960 231560 177390 186600 254930 230120 217770 143250 114890 142030 162210 160950 165440 166770 171050 197580 210260 216570 227950 233440 188730 193310 252660 219670 207280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119010000 13694 4757 12944 26242 21080 21080 1 9606 Homo sapiens 0.04813994786195508 IQGLTVEQAEAVVR Unmodified 1511.8308 0.83075641 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5.5 0.5 1 1 56.986 57.052 2 3.5592999999999997E-28 16703 20230619_1885_Aki_TMTPro18x_K_F5 245.15 208.56 43545 38212 45732 40820 36253 43979 45740 46229 60392 47171 45090 48131 57738 40900 57393 59183 48449 57607 40299 35003 46107 41089 38709 44289 46027 47094 60058 47675 47570 48590 58450 43433 57887 59082 46505 54699 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 889460000 13695 3881 12945 26243;26244 21081 21081 1 9606 Homo sapiens 0.09531426435023604 IQHILCTGNLCTK Unmodified 1556.7803 0.78031752 1430 Q5JPE4;A0A384MR19;F8VXU5;Q9UBQ0;Q9UBQ0-2;E9RKB4 DKFZp667O202;VPS29;vps29 Vacuolar protein sorting-associated protein 29 yes no 0 0 0 4 0 1 50.524 50.555 3 2.6617E-21 14208 20230619_1883_Aki_TMTPro18x_K_F4 222.81 200.13 336650 196160 280050 334060 309840 322080 342350 327920 372420 398800 355510 382380 455540 342110 342150 483760 454900 478960 310300 180930 289950 325630 320330 326610 344190 336580 377410 398680 370030 387620 456190 361960 356920 483110 434320 454890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1558999999.9999998 13696 1430 12946 26245 21082 21082 1 9606 Homo sapiens 0.024198575140417233 IQIADLMEEK Unmodified 1188.606 0.60602477 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;X6RHM1;H3BM18;Q6K0P9-2;Q6K0P9;Q6K0P9-3;Q6K0P9-4;X6RHR0;Q6K0P9-5;H3BVE6;Q6K0P9-6 IFI16;PYHIN1 Gamma-interferon-inducible protein 16;Pyrin and HIN domain-containing protein 1 yes no 0 0 0 4.5 0.5 1 1 61.877 61.903 2 1.5169E-06 18761 20230619_1885_Aki_TMTPro18x_K_F5 190.86 70.704 127340 120820 138760 151950 242660 332890 292380 267170 316940 280450 240240 243940 327810 229820 252910 325710 298470 291610 117950 110820 141870 153170 245590 321120 292320 277620 318520 281770 253930 248930 327970 242830 261400 323620 285090 277360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 409480000 13697 2829 12947 26246;26247 21083;21084 21084 2 9606 Homo sapiens 0.019266003603434 IQIADLMEEK Oxidation (M) 1204.6009 0.6009394 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;X6RHM1;H3BM18;Q6K0P9-2;Q6K0P9;Q6K0P9-3;Q6K0P9-4;X6RHR0;Q6K0P9-5;H3BVE6;Q6K0P9-6 IFI16;PYHIN1 Gamma-interferon-inducible protein 16;Pyrin and HIN domain-containing protein 1 yes no 0 1 0 4 0 1 54.747 54.759 2 0.024882 16120 20230619_1883_Aki_TMTPro18x_K_F4 93.096 57.651 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13698 2829 12947 26248 21085 21085 1686 1 9606 Homo sapiens 0.006822964977118318 IQIAPDSGGLPER Unmodified 1351.7096 0.70957864 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 4.5 0.5 1 1 49.494 49.549 3 0.070279 13861 20230619_1883_Aki_TMTPro18x_K_F4 40.477 15.555 70612 72759 78007 75270 96871 109300 93835 103420 124930 85082 84186 93512 77160 83933 90143 84074 93724 85768 65455 66595 78905 76302 99094 107820 95732 105500 123780 87306 88076 94190 79744 86813 91595 84620 89585 81474 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 475670000 13699 2644;4322 12948 26249;26250 21086 21086 1 9606 Homo sapiens 0.04779223792343146 IQIASESSGIPERPCVLTGTPESIEQAK Unmodified 2996.5125 0.51246533 507 A0A024R8A7;Q96I24;Q96I24-2 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 0 0 1 6.5 0.5 1 1 56.889 56.953 4 2.4392E-05 16847 20230619_1886_Aki_TMTPro18x_K_F6 84.169 67.231 67419 47206 56050 62859 48726 58776 62986 59883 76238 68447 64316 62415 79147 73329 60492 91205 76811 85699 62197 43373 57821 62133 51660 59752 63083 61350 76441 68575 67170 64067 79486 76202 62916 90962 73396 81423 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1026899999.9999999 13700 507 12949 26251;26252 21087;21088 21087 2 9606 Homo sapiens 0.09406959184980224 IQIEAIPLALQGR Unmodified 1420.8402 0.84019889 633 Q53GJ1;Q9H4E3;A0A024RAS3;Q9H0S4-2;Q9H0S4;A4UCU0;B4DYP6 E4-DBP;hCG_27698;DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 0 0 0 2 0 1 62.557 62.567 2 0.020629 19760 20230619_1881_Aki_TMTPro18x_K_F2 61.344 30.115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13701 633 12950 26253 21089 21089 1 9606 Homo sapiens 0.1466123951120153 IQIGCHTDDLTR Unmodified 1427.6827 0.68271197 4736 Q9Y4C2-2;Q9Y4C2;B4DST7 TCAF1 TRPM8 channel-associated factor 1 yes no 0 0 0 5 0 1 42.137 42.22 3 4.6259E-08 10437 20230619_1885_Aki_TMTPro18x_K_F5 150.51 123.72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13702 4736 12951 26254 21090 21090 1 9606 Homo sapiens -0.014022080904851464 IQILEGWK Unmodified 985.55967 0.55966693 2531 B4DLR8;Q53G81;P15559-3;P15559-2;P15559;Q3B792;H3BRK3;H3BNV2;B4DQP5 NQO1 NAD(P)H dehydrogenase [quinone] 1 yes no 0 0 0 2 0 1 62.328 62.338 2 0.0068696 19676 20230619_1881_Aki_TMTPro18x_K_F2 118.5 70.647 96700 73474 80206 105620 130400 185420 180490 169410 232240 137420 128260 161050 170130 123600 145400 138910 151000 163040 89250 67542 83894 104980 133240 180870 180390 173240 229230 141500 138540 161030 171030 129660 148560 140720 144510 154560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160620000 13703 2531 12952 26255 21091 21091 1 9606 Homo sapiens 0.06630948311226348 IQINPQNK Unmodified 953.52943 0.52942943 2963 F5GXX5;Q53G02;P61803 DAD1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 yes no 0 0 0 1 0 1 44.875 44.875 2 0.0012494 12246 20230619_1880_Aki_TMTPro18x_K_F1 162.31 87.867 38567 27008 37657 42501 54799 44426 51585 50676 50758 45809 53718 51716 53073 44924 45465 39402 63321 47402 35623 24863 38602 41658 55335 44942 52164 51211 51866 46731 54931 51992 53838 46283 47307 40163 60302 44996 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20824000 13704 2963 12953 26256 21092 21092 1 9606 Homo sapiens 0.0508058964603606 IQINQEEER Unmodified 1157.5677 0.56766543 1470 A0A384NL74;P42696;A2A2V2;P42696-2;Q5TCT4 RBM34 RNA-binding protein 34 yes no 0 0 0 1 0 1 39.341 39.341 2 9.6216E-06 9787 20230619_1880_Aki_TMTPro18x_K_F1 174.41 128.02 51182 36071 43996 50728 53066 54983 54782 47303 72731 62040 60240 59971 76720 59393 48680 74054 81539 71992 47231 33160 45465 50055 54467 55103 55653 49276 72580 61898 63074 60974 76447 62091 51940 73988 77632 68435 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55059000 13705 1470 12954 26257 21093 21093 1 9606 Homo sapiens -0.00481569229964407 IQLIFER Unmodified 917.53345 0.53345218 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DRG9;B4E3R6;Q15020-2 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 0 1.5 0.5 1 1 59.702 59.709 2 0.071583 18504 20230619_1881_Aki_TMTPro18x_K_F2 76.478 20.301 94585 81796 94300 103130 90596 105910 105500 113610 110300 98990 93854 91217 90883 78267 101900 100180 92249 88919 87489 75047 95825 102440 94827 107040 105690 115120 111420 100580 96964 92545 93377 82307 102880 99707 88334 84587 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105560000 13706 1555 12955 26258;26259 21094 21094 1 9606 Homo sapiens 0.07138679139745818 IQLINNMLDK Oxidation (M) 1216.6486 0.64855829 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DHB3;B4DWQ3;Q16444 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 1 0 4.5 3.5 1 1 55.777 55.808 3 0.0011007 16687 20230619_1880_Aki_TMTPro18x_K_F1 90.142 70.53 139200 107170 129060 130050 127200 179550 138080 136480 180010 165620 168080 202080 203680 172050 184750 234620 220410 222220 128590 98330 131970 130090 132970 176710 139900 143180 180560 167010 174810 202470 205900 181730 190440 233920 210560 211190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 255000000 13707 3374 12956 26260;26261 21095;21096 21095 1977 2 9606 Homo sapiens 0.04889995488565546 IQLINNMLDK Unmodified 1200.6536 0.65364367 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DHB3;B4DWQ3;Q16444 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 2.5 0.5 2 2 62.649 62.669 2;3 3.1019E-06 19806 20230619_1881_Aki_TMTPro18x_K_F2 149.17 96.376 272670 189250 242240 280360 206990 426890 255560 282760 406180 393730 337660 506740 553070 482080 367710 622500 578280 617880 251660 174100 248550 277250 221070 416590 259550 301690 402870 395700 360040 508200 549210 505360 390190 622230 551530 586770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 487540000 13708 3374 12956 26262;26263;26264;26265 21097;21098 21097 2 9606 Homo sapiens 0.061342993511971144 IQLLDLPGIIEGAK Unmodified 1478.8708 0.87083031 4705 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 1.5 0.5 1 1 65.289 65.293 3 0.0014646 20944 20230619_1881_Aki_TMTPro18x_K_F2 73.022 50.824 12277 13105 13183 16724 13290 16421 11353 14498 15540 17000 15054 14194 17680 14787 15531 16201 15241 19416 11381 12018 13338 16580 13764 16580 11704 15006 15594 16963 15576 14556 17855 15320 15820 16435 14614 18392 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61045000 13709 4705 12957 26266;26267 21099 21099 1 9606 Homo sapiens 0.15054973105588942 IQLLVFK Unmodified 859.55312 0.55312499 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;B0QY90;B3KNG0;Q7Z5X3;Q8N7H0 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 0 5 0 1 62.978 63.025 2 0.0061163 19297 20230619_1885_Aki_TMTPro18x_K_F5 110.61 54.101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13710 2176 12958 26268 21100 21100 1 9606 Homo sapiens 0.11773055150513301 IQLNNPTER Unmodified 1083.5673 0.5672715 2336 B2RXJ9;Q8IYS2;Q8IYS2-2 LOC728138;KIAA2013 Uncharacterized protein KIAA2013 yes no 0 0 0 6 0 1 42.059 42.153 2 0.009608 10412 20230619_1886_Aki_TMTPro18x_K_F6 85.862 67.953 83222 68068 84378 96024 107040 106240 111430 110260 125090 105360 109300 102030 118210 92829 95373 127290 115670 105930 76962 62541 86029 94781 109410 106750 112490 112230 126000 106670 113210 103510 119260 97887 98678 126070 110410 100870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37867000 13711 2336 12959 26269 21101 21101 1 9606 Homo sapiens 0.028830558408344586 IQLPEDE Unmodified 842.40216 0.40216323 4172 Q7Z4X2;Q9NX14;Q9NX14-2 NDUFB11 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial yes no 0 0 0 1.5 0.5 1 1 53.976 53.991 2 0.025649 15995 20230619_1880_Aki_TMTPro18x_K_F1 97.602 88.361 317890 212790 286510 304330 277210 320330 342560 318310 385380 296460 321710 302690 329250 258890 293840 340500 312710 291850 293370 195700 293670 299960 290630 322520 342840 324850 387300 301130 333260 305720 334000 272830 300710 338030 298870 277800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118860000 13712 4172 12960 26270;26271 21102 21102 1 9606 Homo sapiens -0.025341760188098306 IQLPSEK Unmodified 813.45962 0.45961853 3071 H3BQ50;P60520;H3BSM5 GABARAPL2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes no 0 0 0 7 0 1 48.749 48.836 2 0.011376 13028 20230619_1887_Aki_TMTPro18x_K_F7 116.73 35.429 149540 128700 142090 139310 129620 136090 125410 118290 138120 163630 167590 140830 173800 128850 143630 166110 176770 134330 138260 117910 144720 139840 135490 137550 127190 123340 141310 162220 170620 143680 175630 135340 148520 164500 168510 128080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86515000 13713 3071 12961 26272 21103 21103 1 9606 Homo sapiens 0.04542710977432307 IQLPVVSK Unmodified 882.55385 0.55385327 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 3.5 0.5 1 1 56.166 56.189 2 0.032627 16756 20230619_1883_Aki_TMTPro18x_K_F4 77.732 35.133 52586 51590 58345 55608 57058 67562 62241 65650 76553 63276 60464 52708 68250 50422 59620 69168 61422 58075 48729 47243 58761 56019 59547 67372 62909 67107 76519 63784 63077 53964 68953 53109 60929 68559 58727 55289 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56404000 13714 3588 12962 26273;26274 21104 21104 1 9606 Homo sapiens 0.10787849799567084 IQLSSLIAAFQVTR Unmodified 1545.8879 0.88787736 2029 Q6LES9;A8K3S0;P40937;A8K4Z2;Q59GW7;P40937-2 RFC5 Replication factor C subunit 5 yes no 0 0 0 8 0 1 65.511 65.53 2 0.0039395 20180 20230619_1888_Aki_TMTPro18x_K_F8 95.264 54.833 11157 10884 10001 10979 9103.8 10139 7250.1 7544.3 10602 7604.7 7142.9 6410.4 7085.9 8917.7 8829.1 10527 8583.1 7787.7 10320 9961.5 10243 11072 9489.3 10265 7527.6 7894.2 10468 7660 7487.7 6657.8 7339.1 9184.8 8943.3 10397 8209.1 7428.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33357000 13715 2029 12963 26275 21105 21105 1 9606 Homo sapiens 0.13676893711385674 IQLVEEELDR Unmodified 1242.6456 0.6455814 1095;1096;3746;3083;2862;3405 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;J3KN67;M1VPF4;A0A2R2Y2Q3;A0A494C0P6;D6R904;A0A494C0G0;H0YL80;P09493-3;D9YZV5;P09493-4;Q15657;P09493-10;A0A0K0K1I0;P09493-8;Q8TCG4;P09493-9;H0YKX5;P09493;D9YZV4;Q6ZN40;A0A0S2Z4G6;P09493-6;C9IZA2;H0YKP3;B4DTK3;H7BYY1;B7Z596;F5H7S3;Q1ZYL5;P09493-2;B7Z722;D9YZV7;P09493-5;A0A494BZZ2;H0YKJ4;H0YK48;Q59GR8;A0A024R5W6;P09493-7;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A2R8YEU4;Q5TCU3;P07951;V9HW25;CON__Q3SX28;A7XZE4;P07951-2;B4DGC2;P07951-3 TPM3;DKFZp686J1372;TPM3-ROS1;TPM1;TPM4;HEL-S-108;TPM2;HEL-S-273;TPM2b Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor;Tropomyosin alpha-1 chain;Tropomyosin alpha-4 chain;Tropomyosin beta chain no no 0 0 0 2 0.816 1 1 1 60.731 60.737 2 1.7155E-09 18886 20230619_1881_Aki_TMTPro18x_K_F2 204.34 147.79 + 445080 312770 362580 483020 438310 631190 553510 527690 708400 595010 510400 576730 648810 529990 534580 643320 549420 657280 410560 287860 377360 475230 453970 623970 555720 547990 704970 597590 539440 584510 652290 554420 547060 645120 526290 623740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 306760000 13716 1095;2862;3083;1096;3746;3405 12964 26276;26277;26278 21106;21107;21108 21107 3 9606 Homo sapiens 0.033964436354153804 IQLVEEELDRAQER Unmodified 1726.885 0.88497683 1095;1096;3746;3083;2862;3405 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;J3KN67;M1VPF4;A0A2R2Y2Q3;A0A494C0P6;D6R904;A0A494C0G0;H0YL80;P09493-3;D9YZV5;P09493-4;Q15657;P09493-10;A0A0K0K1I0;P09493-8;Q8TCG4;P09493-9;H0YKX5;P09493;D9YZV4;Q6ZN40;A0A0S2Z4G6;P09493-6;C9IZA2;H0YKP3;B4DTK3;H7BYY1;B7Z596;F5H7S3;Q1ZYL5;P09493-2;B7Z722;D9YZV7;P09493-5;A0A494BZZ2;H0YKJ4;H0YK48;Q59GR8;A0A024R5W6;P09493-7;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A2R8YEU4;Q5TCU3;P07951;V9HW25;CON__Q3SX28;A7XZE4;P07951-2;B4DGC2;P07951-3 TPM3;DKFZp686J1372;TPM3-ROS1;TPM1;TPM4;HEL-S-108;TPM2;HEL-S-273;TPM2b Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor;Tropomyosin alpha-1 chain;Tropomyosin alpha-4 chain;Tropomyosin beta chain no no 0 0 1 3 0.816 1 1 1 58.619 58.634 3 1.1738E-28 18011 20230619_1881_Aki_TMTPro18x_K_F2 248.23 197.66 + 886940 827090 836220 856460 997770 1060500 1052000 1164400 1127000 1092400 768650 899740 1124000 877370 989300 1462800 706050 995330 820460 757260 856270 865850 1024800 1059600 1059900 1179600 1130900 1101800 822210 921990 1128800 936510 995550 1432900 680280 949260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1556999999.9999998 13717 1095;2862;3083;1096;3746;3405 12965 26279;26280;26281 21109;21110 21109 2 9606 Homo sapiens 0.050609737959575796 IQNAGGSVMIQR Unmodified 1272.6609 0.66085431 389;3314 O75688-2;B8ZZF0;C9JIR6;A0A3B3IS24;A8K599;Q4J6C0;B3KP90;O75688-4;O75688;O75688-5;B5BUD5;B2R8E4;A0A024R6A5;P35813;P35813-3;P35813-2;E9PKB5 PPM1B;PPM1A Protein phosphatase 1B;Protein phosphatase 1A no no 0 0 0 2 0 1 43.615 43.698 2 8.5628E-13 11535 20230619_1881_Aki_TMTPro18x_K_F2 180.66 146.92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13718 3314;389 12966 26282 21111 21111 1 9606 Homo sapiens 0.03543031951630837 IQNDAGVR Unmodified 871.45118 0.45117911 3197;2644;4322;507 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5;B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;A0A024R8A7;Q96I24;Q96I24-2 KHSRP;FUBP1;hCG_31253;FUBP3 Far upstream element-binding protein 2;Far upstream element-binding protein 1;Far upstream element-binding protein 3 no no 0 0 0 3.5 0.5 1 1 33.783 33.843 2 0.00040637 7053 20230619_1883_Aki_TMTPro18x_K_F4 164.72 96.325 92173 44253 110050 129560 187330 184440 131740 176910 145440 82497 159580 204040 124230 146240 151520 69792 216310 204720 85147 41269 111550 124340 186760 182000 136600 178630 147660 92154 161870 199450 129560 148640 156690 79193 206250 193060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123700000 13719 3197;2644;4322;507 12967 26283;26284 21112;21113 21113 2 9606 Homo sapiens 0.010311570608109832 IQNGAQGIR Unmodified 955.51993 0.51992738 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;D6RBM0;D6RIU0;D6RIT2;D6R9T0;D6RIH9;D6RFM3;D6RJ04;D6RAM1;D6RDU3;E7EN40;E7EQJ0;D6RDL0;D6RF17 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 0 0 7.5 0.5 1 1 35.469 35.458 2 7.6176E-17 7483 20230619_1887_Aki_TMTPro18x_K_F7 204.65 161.74 51246 29100 79326 72449 102940 141770 79323 104260 93813 54578 77977 89242 69066 66253 99813 35993 82222 68843 47510 27016 78590 70401 104600 137040 81875 107660 93987 58943 80505 88170 72267 67486 99617 38722 78747 65088 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77072000 13720 1427 12968 26285;26286 21114;21115 21114 2 9606 Homo sapiens 0.04038821360518341 IQNSSGTDYPDIHAAAK Unmodified 1786.8486 0.84859132 3620 P50748;B4DDZ9;P50748-2 KNTC1 Kinetochore-associated protein 1 yes no 0 0 0 5.5 0.5 1 1 44.516 44.6 3 1.7128E-14 11475 20230619_1885_Aki_TMTPro18x_K_F5 168.41 152.05 29414 19111 28074 28056 22251 28761 27624 23687 30311 33179 31910 35460 36903 26631 26096 38445 34314 38638 27153 17585 28545 27598 23754 28897 27630 24823 30813 33089 32895 35585 36965 28408 27250 38413 32782 36681 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76747000 13721 3620 12969 26287;26288 21116 21116 1 9606 Homo sapiens -0.013359031007439626 IQNTGDYYDLYGGEK Unmodified 1734.7737 0.77369504 1318 Q06124-1;Q06124;A0A8I5KW48;A0A3G1LBG2;A0A1W2PPU4;A0A8I5QJ58;Q06124-3;A0A8I5KRZ3;A0A8I5QL30;A0A8I5KVS6;B3GUD5;B3GUD4;A0A6C0W4Z4;A0A6C0W4Z3;A0A6C0W501;A0A6C0W5J5;A0A6C0W5U7;A0A6C0W763 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 0 0 0 5.5 0.5 1 1 55.875 55.944 3 1.438E-07 16259 20230619_1885_Aki_TMTPro18x_K_F5 123.63 117.9 34773 29824 32854 39382 34461 38114 36819 40962 45176 44785 50345 49862 52857 39981 47297 51941 49356 56586 32149 27378 33597 38962 35748 38699 37264 41748 45755 45200 51513 50068 53564 42229 48335 52246 47254 53670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68823000 13722 1318 12970 26289;26290 21117 21117 1 9606 Homo sapiens -0.06430085632018745 IQNWHEEHR Unmodified 1247.5796 0.57956752 2184 P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;Q05CU6;Q6PKD3 RDX Radixin yes no 0 0 0 3.5 0.5 1 1 31.111 31.186 3 1.5539E-06 5993 20230619_1883_Aki_TMTPro18x_K_F4 163.38 146.36 38881 27374 55120 54985 71889 69940 61096 72461 56576 46592 72365 69593 54761 47550 71935 38378 64838 49209 36045 25289 54883 53417 72911 69609 62145 73126 58454 49145 72752 68857 57248 49280 72260 39445 61997 46682 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74731000 13723 2184 12971 26291;26292 21118 21118 1 9606 Homo sapiens -0.03431907696108283 IQPALQEK Unmodified 925.52328 0.52328142 4401 Q99471;H3BPF6;H3BMQ1;Q99471-3;F8VNW6;A0A0D9SFR8 PFDN5 Prefoldin subunit 5 yes no 0 0 0 6 0 1 45.237 45.326 2 0.00016183 11812 20230619_1886_Aki_TMTPro18x_K_F6 171.73 114.56 221010 151490 222300 216030 221100 246060 222890 224220 278190 249670 262930 247470 260010 234860 234300 218120 337800 271690 204160 139310 225640 213220 229900 245980 226410 231240 279610 251000 270220 250840 264450 241850 244280 222550 321740 257720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203680000 13724 4401 12972 26293 21119 21119 1 9606 Homo sapiens 0.05754071414526152 IQPEILELIK Unmodified 1194.7224 0.72237516 1941 Q92556;A4D1X5;B4DJV6;Q92556-3;Q92556-2;B4DZ20;Q96JJ3;Q96JJ3-3;B4DRL5;Q5JVZ5;B7Z1S8;H0YCM7;Q5JW01 ELMO1;ELMO2 Engulfment and cell motility protein 1;Engulfment and cell motility protein 2 yes no 0 0 0 7.5 0.5 1 1 64.019 64.045 3 0.00012204 19534 20230619_1888_Aki_TMTPro18x_K_F8 118.23 72.921 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13725 1941 12973 26294;26295 21120;21121 21121 2 9606 Homo sapiens 0.13280286922554296 IQPFHFIK Unmodified 1028.5807 0.58073672 3985 Q53EY9;Q8NEZ5;Q8NEZ5-3;B4DFX7;H3BVA4;H3BUC1 FBXO22 F-box only protein 22 yes no 0 0 0 5 0 1 53.888 53.957 3 0.0045676 15445 20230619_1885_Aki_TMTPro18x_K_F5 92.439 52.817 48856 43443 39446 44071 43943 55855 42308 42833 64573 49055 38008 39884 44669 37790 40712 55070 45685 37847 45128 39774 40952 44618 45374 55293 43424 44816 63457 49020 40546 40841 45211 39945 41821 54060 43609 36158 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61927000 13726 3985 12974 26296 21122 21122 1 9606 Homo sapiens 0.06758958410750893 IQPNDGPVFYK Unmodified 1276.6452 0.64518747 2718 B8ZZB8;Q96F85-2;Q96F85 CNRIP1 CB1 cannabinoid receptor-interacting protein 1 yes no 0 0 0 7.5 0.5 1 1 53.784 53.853 2 8.3158E-18 15179 20230619_1888_Aki_TMTPro18x_K_F8 203.94 154.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13727 2718 12975 26297;26298 21123;21124 21124 2 9606 Homo sapiens 0.017930687062289508 IQQDADSVITVGR Unmodified 1400.726 0.72595699 257 A0A024R3P9;Q9H3P7 ACBD3 Golgi resident protein GCP60 yes no 0 0 0 4.5 0.5 1 1 50.136 50.171 2 4.4781E-15 14070 20230619_1883_Aki_TMTPro18x_K_F4 223.31 177.59 94028 76241 79931 91998 87564 96707 109270 99262 122400 114000 113440 112710 124300 100610 112830 131880 130350 132110 86833 69936 82575 91679 90967 97501 109270 101650 123580 114400 117290 114100 125960 105860 116000 131980 124560 125470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 282310000 13728 257 12976 26299;26300 21125;21126 21125 2 9606 Homo sapiens 0.04162304958435925 IQQEIAVQNPLVSER Unmodified 1722.9264 0.92644771 4350 Q96FW1;Q659F9;B4DPD5;F5GYN4;F5GYJ8 OTUB1;DKFZp564E242 Ubiquitin thioesterase OTUB1 yes no 0 0 0 5.67 0.471 1 2 55.84 55.912 2;3 1.5203999999999999E-19 16390 20230619_1886_Aki_TMTPro18x_K_F6 247.69 184.2 89862 76295 84957 86211 80334 92659 93533 96867 99008 101300 101350 105220 103820 89739 99050 104820 104400 121960 83075 69930 86654 86375 84198 93314 93746 98774 100680 102230 104020 106090 105660 93902 101140 106030 99960 115590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 970400000 13729 4350 12977 26301;26302;26303 21127;21128 21128 2 9606 Homo sapiens 0.09390154555285335 IQQGALELLR Unmodified 1139.6663 0.66625727 4301 Q92621;B4DE72;Q6P486;U3KPX2 NUP205 Nuclear pore complex protein Nup205 yes no 0 0 0 4.5 3.5 1 1 57.331 57.357 2 0.0089001 16716 20230619_1888_Aki_TMTPro18x_K_F8 81.263 48.631 166920 146190 184910 200730 169340 196410 206750 204270 188300 188680 172600 160080 181400 129590 201150 168700 163910 142120 154560 134250 186230 198140 178050 199050 205770 207750 192320 190590 178240 162790 185580 136850 201950 167540 157030 135350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168500000 13730 4301 12978 26304;26305 21129;21130 21130 2 9606 Homo sapiens 0.10201078805744146 IQQIIEGK Unmodified 927.53893 0.53893149 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YFD1;A0A2R8YD53;A0A2R8YGE5;A0A2R8Y4Q3 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 7.5 0.5 1 1 55.047 55.111 3 0.010304 15712 20230619_1888_Aki_TMTPro18x_K_F8 74.301 53.15 46058 38169 41309 49942 56616 62662 59484 63284 71477 60875 65495 69068 65924 56547 67954 65772 72356 73364 42555 35039 42650 49621 57698 62399 60164 64519 71871 61910 67535 69314 67376 59236 69294 66381 69194 69598 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215430000 13731 2865 12979 26306;26307 21131 21131 1 9606 Homo sapiens 0.07226357931563143 IQQLAISGLK Unmodified 1069.6495 0.64954457 60 A0A024QZR5;Q9Y2T2;Q8NDP0;B4DRN6;H0YBM0 AP3M1;DKFZp586G1518;AP3M2 AP-3 complex subunit mu-1 no no 0 0 0 3 0 1 58.623 58.654 3 0.00047064 17868 20230619_1882_Aki_TMTPro18x_K_F3 91.937 37.329 22126 18385 22510 22224 20820 21352 24967 21296 28701 21708 28307 24834 29045 24110 25466 29556 26610 30968 20465 16863 22807 22124 21859 21665 25045 21789 28976 22030 29068 25077 29445 25186 26046 29679 25479 29382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13471000 13732 60 12980 26308 21132 21132 1 9606 Homo sapiens 0.11750577919769967 IQQLTALGAAQATAK Unmodified 1483.8358 0.83584179 4401 Q99471;H3BPF6;H3BMQ1;Q99471-3;F8VNW6;A0A0D9SFR8 PFDN5 Prefoldin subunit 5 yes no 0 0 0 3.5 0.5 2 2 57.309 57.329 2;3 4.7348E-14 17344 20230619_1882_Aki_TMTPro18x_K_F3 222.29 184.74 471610 357060 481150 545150 431840 501280 510130 500970 506260 541620 515140 522470 530470 485400 568260 608440 649420 621890 435950 328480 487650 534250 454590 509960 509880 513100 516620 544530 529070 530120 543080 508350 581860 610080 620380 590640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1535599999.9999998 13733 4401 12981 26309;26310;26311;26312 21133;21134 21133 2 9606 Homo sapiens 0.11327730297625749 IQQNTFTR Unmodified 1006.5196 0.51959303 3484;3299;3886 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98;Q14315;Q14315-2;O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;A0A804HJC2 FLNA;FLNC;FLNB Filamin-A;Filamin-C;Filamin-B no no 0 0 0 3.67 3.09 1 1 1 39.082 39.1 2 0.0027642 9664 20230619_1880_Aki_TMTPro18x_K_F1 121.53 99.297 315480 240730 309060 319790 448470 467850 398120 398890 552200 408000 467730 455210 448370 408540 420980 440210 536290 469590 291550 221100 316640 318300 453510 460260 408920 412380 550020 413690 482870 458480 457280 424530 434990 443510 511540 445950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1110600000 13734 3484;3886;3299 12982 26313;26314;26315 21135;21136;21137 21135 3 9606 Homo sapiens 0.01659401640665692 IQQQFSDLK Unmodified 1105.5768 0.57677356 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 0 7.5 0.5 1 1 52.14 52.216 2 1.2925E-10 14469 20230619_1888_Aki_TMTPro18x_K_F8 185.6 125.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13735 3337 12983 26316;26317 21138;21139 21139 2 9606 Homo sapiens 0.02820824126365551 IQQQQPPPGEK Unmodified 1248.6463 0.64625011 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;A0A140T954 VARS Valine--tRNA ligase yes no 0 0 0 5 0 1 38.572 38.664 3 0.0024583 8953 20230619_1885_Aki_TMTPro18x_K_F5 76.655 61.511 24266 16480 30710 29073 42208 47115 31069 33915 44087 33332 46379 49519 48562 39937 43980 30835 52124 49412 22463 15197 30820 28533 42646 45945 32389 35532 44232 34243 47587 49181 49268 41055 45173 32221 49775 46745 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34894000 13736 725 12984 26318 21140 21140 1 9606 Homo sapiens 0.03187283075135383 IQQYISHR Unmodified 1043.5512 0.55122751 484 A0A024R811;Q53H82 LACTB2 Beta-lactamase-like protein 2 yes no 0 0 0 2 0 1 39.887 39.957 3 0.0058812 9782 20230619_1881_Aki_TMTPro18x_K_F2 90.601 70.814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13737 484 12985 26319 21141 21141 1 9606 Homo sapiens 0.031193943945936553 IQRPPEDSIQPYEK Unmodified 1698.8577 0.85769944 1248 Q16851-2;A0A140VKE1;A0A7I2YQ74;Q16851;E7EUC7;B4DUP2;A0A087WYS1;B2RAN1;Q53QE9;A0A7I2V676;C9JNZ1;A0A7I2V4T0;C9JVG3;C9JWG0;C9JQU9;A0A7I2V2Q3;C9JUW1;C9JTZ5 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes no 0 0 1 4.5 0.5 1 1 45.028 45.089 3 1.7049E-07 11747 20230619_1883_Aki_TMTPro18x_K_F4 143.38 110.64 109460 91193 108920 120080 123420 155790 137990 121690 138050 143160 166960 169570 171300 147670 143730 166290 173750 184450 101230 83719 111020 119310 127570 153970 138270 127300 141790 144360 170130 170210 173400 154040 148430 167760 166020 174960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 251130000 13738 1248 12986 26320;26321 21142;21143 21143 2 9606 Homo sapiens 0.03622490255543198 IQSIYLER Unmodified 1020.5604 0.56039521 2289 B2RAX6;Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 0 0 0 7.5 0.5 1 1 50.754 50.831 2 0.0022126 13882 20230619_1888_Aki_TMTPro18x_K_F8 130.31 62.847 428910 359340 420290 435130 402370 513130 469710 441050 565830 481540 453990 445820 519310 409040 407690 605310 526770 520170 396600 329600 427590 434230 421850 511160 472570 456700 566440 483690 473750 453300 522610 433590 424200 599730 502810 494980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 264470000 13739 2289 12987 26322;26323 21144;21145 21145 2 9606 Homo sapiens 0.05093742960275449 IQSLGDSK Unmodified 846.4447 0.44469675 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 7 0 1 45.224 45.309 2 0.031716 11434 20230619_1887_Aki_TMTPro18x_K_F7 78.098 20.92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13740 1637 12988 26324 21146 21146 1 9606 Homo sapiens 0.015332191094216796 IQSTPVK Unmodified 771.44905 0.44905385 3725 Q5U0I6;P62820;B7Z8M7;E7END7;P62820-2;P62820-3;Q96RD8 RAB1A Ras-related protein Rab-1A yes no 0 0 0 8 0 1 40.937 40.929 2 0.0068921 9855 20230619_1888_Aki_TMTPro18x_K_F8 129.47 62.431 53046 31400 73751 68883 101830 105770 70534 95418 87688 57440 84699 98848 75730 79351 93661 38790 104810 91000 49124 29075 73568 66903 102640 103840 73552 97094 88141 61379 86784 97705 78539 80332 95218 42751 100070 85929 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41128000 13741 3725 12989 26325 21147 21147 1 9606 Homo sapiens 0.054187283229907734 IQTLPNQNQSQTQPLLK Unmodified 1950.0534 0.053439139 4208 Q8IX12-2;Q8IX12;A0A0C4DGG8;F5H2E6;F5H3E1;F5H1H2 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 0 0 0 2.5 0.5 1 1 53.171 53.218 3 1.9172E-13 15839 20230619_1881_Aki_TMTPro18x_K_F2 152.37 127.84 53017 43765 50897 57760 55574 57288 54323 56854 62135 51394 45770 52446 61949 48159 54787 65826 49072 57255 49010 40180 51981 57164 57302 57960 55095 57974 62220 52283 48493 53063 62340 50760 55586 65354 47063 54442 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271060000 13742 4208 12990 26326;26327 21148 21148 1 9606 Homo sapiens 0.11641455709604998 IQTNNNPFQVPIEEQR Unmodified 1925.9595 0.95953875 884 Q04206;A0A087X0W8;Q04206-3;Q04206-2;B4E082;E9PKH5;Q2TAM5;E9PKV4;Q96CP1;Q96F54;E9PQS6;E9PI38 RELA Transcription factor p65 yes no 0 0 0 6 0 1 55.541 55.617 3 4.9432E-06 16295 20230619_1886_Aki_TMTPro18x_K_F6 112.34 99.777 45015 39675 42089 52805 44540 63142 51919 45358 67860 48344 48624 51517 45588 51626 48685 56891 57656 57696 41622 36420 43122 52341 46411 62613 52377 47679 67397 48870 50689 52162 46883 53469 49993 57112 55079 54791 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40829000 13743 884 12991 26328 21149 21149 1 9606 Homo sapiens 0.033597366073308876 IQTQPGYANTLR Unmodified 1360.7099 0.709913 669 Q8NCF7;A0A024RBE8;A0A024RBH9;Q00325-2;Q00325;F8VVM2;Q53HC3;B2RE88 SLC25A3 Phosphate carrier protein, mitochondrial yes no 0 0 0 3.67 3.09 1 1 1 43.447 43.478 2 2.2854E-24 11409 20230619_1881_Aki_TMTPro18x_K_F2 264.17 190.51 437100 378370 431150 515340 795030 870500 572020 552770 617140 406710 480730 497030 426720 396910 520770 451760 505600 490610 404270 347440 444440 513240 791010 845820 590820 582720 620320 422250 497670 497210 441990 415450 526670 455540 483790 465630 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1127500000 13744 669 12992 26329;26330;26331 21150;21151;21152 21151 3 9606 Homo sapiens 0.04398643512217859 IQVHPYK Unmodified 883.49159 0.49158736 4578 Q9NQW7-4;Q9NQW7-3;Q5T6H7;B3KSI7;Q9NQW7-2;Q9NQW7;B4E2P4;B4DIS4;Q5T6H2 XPNPEP1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 2 0 1 40.337 40.411 3 0.0088463 9985 20230619_1881_Aki_TMTPro18x_K_F2 94.662 46.919 334920 232870 290720 286770 348210 358800 359910 375200 426940 380650 413640 478930 466780 367690 382320 507740 513180 454240 309060 213790 299830 286220 357440 357770 364280 382210 430560 387370 427720 477980 470660 390300 398140 504620 489330 432220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265380000 13745 4578 12993 26332 21153 21153 1 9606 Homo sapiens 0.045181234512256196 IQVHYYEDGNVQLVSHK Unmodified 2028.0065 0.0064889465 3638;1928 P52907;A8K0T9;Q53GE2;Q53GC7;A4D0V4;P47755;B4DE01 CAPZA1;CAPZA2 F-actin-capping protein subunit alpha-1;F-actin-capping protein subunit alpha-2 no no 0 0 0 6.83 1.07 1 1 2 2 59.401 59.456 4 2.9105E-18 12636 20230619_1887_Aki_TMTPro18x_K_F7 178.66 164.2 1094800 841820 1105600 1102600 1141200 1270400 1161300 1081400 1159600 1354300 1329200 1465500 1536800 1321800 1280500 1411500 1552500 1558000 1012000 773020 1122600 1094100 1182900 1267500 1170100 1125400 1189700 1357300 1365800 1477000 1549900 1373100 1322300 1424900 1482800 1478200 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3120599999.9999995 13746 3638;1928 12994 26333;26334;26335;26336;26337;26338 21154;21155;21156;21157 21156 4 9606 Homo sapiens 0.03360596158427143 IQVLQQQADDAEER Unmodified 1641.7958 0.79582747 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;D6R904;Q5VU61;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4 TPM3;DKFZp686J1372 Tropomyosin alpha-3 chain no no 0 0 0 2.25 0.829 1 1 2 49.762 49.807 2;3 2.8866E-37 14275 20230619_1880_Aki_TMTPro18x_K_F1 220.32 202.66 150310 102950 119100 145160 126490 155330 126160 130030 204900 179540 171850 198950 211580 170340 144960 221080 217060 238570 138610 94660 123850 143160 131170 155650 129640 135940 202980 179500 179680 200060 211540 179400 152980 222080 207130 226330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1064999999.9999999 13747 1095;1096 12995 26339;26340;26341;26342 21158;21159;21160;21161 21159 4 9606 Homo sapiens 0.0006013883644300222 IQVLQQQADDAEERAER Unmodified 1997.9766 0.97664538 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;D6R904;Q5VU61;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4 TPM3;DKFZp686J1372 Tropomyosin alpha-3 chain no no 0 0 1 2 0.816 1 1 1 49.939 49.984 3 2.6357E-30 14408 20230619_1881_Aki_TMTPro18x_K_F2 236.16 205.19 414810 343300 360540 412180 396920 450550 409580 444070 490290 479150 448670 488760 579400 473160 457200 738350 640790 660460 383180 314870 371620 411110 410090 452540 414830 454940 493560 482720 468210 495700 581540 502600 478760 732390 611460 628060 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1948199999.9999998 13748 1095;1096 12996 26343;26344;26345 21162;21163;21164;21165 21163 4 9606 Homo sapiens 0.017576124224660816 IQVLVEPDHFK Unmodified 1323.7187 0.71868677 386 Q86TY5;Q6FGL0;A0A024R693;Q59FR8;P17931 LGALS3;hCG_22119 Galectin;Galectin-3 yes no 0 0 0 7 0 1 54.796 54.859 3 3.6877E-09 15714 20230619_1887_Aki_TMTPro18x_K_F7 180.18 140.26 55915 50783 57495 59152 94203 116630 125870 118230 150340 64363 58063 65459 83666 53204 60961 78345 67078 73518 51751 46549 58916 59818 95893 113540 125630 119160 147820 68119 65078 66043 83427 56693 62823 77997 64165 69855 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38375000 13749 386 12997 26346 21166 21166 1 9606 Homo sapiens 0.0697761714866374 IQVSELCK Unmodified 975.50592 0.5059168 4310 Q92896;Q92896-3;Q92896-2;H3BM42 GLG1 Golgi apparatus protein 1 yes no 0 0 0 7 0 1 50.164 50.245 3 0.00086125 13692 20230619_1887_Aki_TMTPro18x_K_F7 104.2 51.718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13750 4310 12998 26347 21167 21167 1 9606 Homo sapiens 0.01718407817213574 IQVTPPGFQLVFLPFADDK Unmodified 2131.1354 0.13537785 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 0 0 0 3 0.816 1 1 1 66.863 66.883 3 0.0047761 21158 20230619_1883_Aki_TMTPro18x_K_F4 66.12 57.521 1770.8 1943.5 2648.4 2637.3 2037.5 2529.4 1992 2548.8 3312.3 2893.3 2873.3 3529.8 1950.7 3039.4 3843 3303.8 2866.1 4906 1647.6 1783.2 2607.9 2604.9 2166.1 2565.4 2054.9 2611.1 3280.6 2925.8 2935.7 3535.4 2119.2 3161.4 3818.7 3406.6 2765.8 4635.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60370000 13751 150 12999 26348;26349;26350 21168 21168 1 9606 Homo sapiens 0.11505558068665778 IQVWHAEHR Unmodified 1174.5996 0.59957468 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;J7M2B1 EZR;HEL-S-105;EZR-ROS1 Ezrin;Tyrosine-protein kinase receptor yes no 0 0 0 7 0 1 35.034 35.11 3 2.5682E-06 7362 20230619_1887_Aki_TMTPro18x_K_F7 162.8 122.89 49015 35426 46888 48246 51711 61099 54552 56425 59698 49424 50589 38703 52195 39472 49594 48292 57860 42257 45273 32552 47895 47829 53444 60674 55002 57758 60141 50023 52329 39860 53075 41184 50917 48060 55172 40257 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76074000 13752 3456 13000 26351 21169 21169 1 9606 Homo sapiens 0.019258880344978024 IQYQLVDISQDNALRDEMR Unmodified 2306.1325 0.1324941 2808 Q5T123;Q86Z22;D3DPK5;Q9H299 SH3BGRL3;HEL-S-297 SH3 domain-binding glutamic acid-rich-like protein 3 yes no 0 0 1 6 0 1 59.289 59.351 3 3.496E-05 17870 20230619_1886_Aki_TMTPro18x_K_F6 92.977 82.509 21654 18692 27267 27461 21933 23721 34311 29563 33237 25484 32616 32157 31888 22892 35413 34397 27067 28600 20073 17179 27161 26965 23500 24396 33834 29713 33847 26176 33474 32055 32696 24529 35484 34062 25989 27220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 289530000 13753 2808 13001 26352 21170 21170 1 9606 Homo sapiens 0.03167314881602579 IRDAYTHPQFVTDVMK Unmodified 1919.9564 0.95636763 3692 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 1 1 0 1 50.298 50.298 4 6.4917E-08 14498 20230619_1880_Aki_TMTPro18x_K_F1 133.86 113.2 52804 39301 43949 50437 34562 42439 40841 53494 64771 61568 41693 51821 78328 53557 46867 103030 83061 72245 48731 36085 45275 49924 36918 43763 41584 54066 63785 61498 45499 53176 77260 57825 50514 100830 79047 68984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112850000 13754 3692 13002 26353 21171 21171 1 9606 Homo sapiens 0.03318770228906942 IRDEMVATEQER Oxidation (M) 1491.6988 0.69875596 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 1 1 1.5 0.5 1 1 33.004 33.033 3 0.00021306 7181 20230619_1880_Aki_TMTPro18x_K_F1 107.93 95.3 98146 72945 84634 105470 102550 93047 95938 102360 126440 99435 121610 123320 126200 99784 111570 130560 120920 114500 90597 67066 87459 103630 104850 95273 98073 103880 126800 101410 125190 123380 127920 105320 114330 129760 115560 108950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 265710000 13755 1076 13003 26354;26355 21172;21173 21172 640 2 9606 Homo sapiens -0.0274254664423097 IRDEMVATEQER Unmodified 1475.7038 0.70384134 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 0 1 2 0.816 1 1 1 38.582 38.621 3 1.7121E-13 9144 20230619_1881_Aki_TMTPro18x_K_F2 190.27 154.68 139150 113850 136330 139810 136460 155680 147860 150690 177220 160230 170540 157830 199850 148230 160420 209710 178090 167060 128650 104450 138750 139280 142120 156090 149370 154530 178600 161400 176450 160190 201020 156510 165070 207220 170150 159170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 457010000 13756 1076 13003 26356;26357;26358 21174;21175 21175 2 9606 Homo sapiens -0.014982427815994015 IRDIDLK Unmodified 871.51272 0.51271674 393 A0A024R6D8;Q13243-3;Q13243;Q59EK7;B4DJK0;B4DUA4;G3V5K8;B5BUD8;Q13243-2 SFRS5;SRSF5 Serine/arginine-rich splicing factor 5 yes no 0 0 1 6.5 0.5 1 1 45.363 45.449 3 0.0073159 11463 20230619_1887_Aki_TMTPro18x_K_F7 106.38 27.885 776460 538810 579260 685050 828980 813940 821160 797410 1046300 752730 810260 814580 914390 687590 814290 919210 922530 853350 715780 494830 609170 681380 841150 813080 834820 814580 1043000 765590 846980 820250 924780 725970 836290 916020 881140 811470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 789430000 13757 393 13004 26359;26360 21176;21177 21177 2 9606 Homo sapiens 0.07182088760100669 IRDLLDVSK Unmodified 1057.6132 0.61315906 2727;1036 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;Q6P164;Q66K46;Q2TA90;O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;A0A7I2V581;A0A7I2V3V4;Q6PKD1;Q6PJC4;Q57YV5 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12;KIF5C Kinesin-1 heavy chain;Kinesin-like protein;Kinesin heavy chain isoform 5C no no 0 0 1 1 0 1 53.644 53.644 3 0.00025822 15812 20230619_1880_Aki_TMTPro18x_K_F1 127.42 96.051 658200 497720 591590 711890 525390 598180 674940 684890 802330 713060 678450 568950 686970 537060 672870 715740 663750 511100 607820 457520 606280 699620 555420 615290 675800 694560 805010 714850 701620 583530 699880 564520 684150 704930 634110 488170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120640000 13758 2727;1036 13005 26361 21178 21178 1 9606 Homo sapiens 0.08665701023096517 IRDLLPVMCDR Unmodified 1386.7112 0.71117532 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 1 1.5 0.5 1 1 55.056 55.066 3 0.00062259 16630 20230619_1881_Aki_TMTPro18x_K_F2 90.793 63.678 70749 56068 58735 66861 55783 71090 71343 72978 82071 83993 78518 76665 92858 72774 70019 97064 88521 94707 65315 51430 60686 66698 58708 71591 71365 74705 82899 84071 81320 78063 93207 76520 72774 96930 84560 89956 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186370000 13759 1601 13006 26362;26363 21179 21179 1 9606 Homo sapiens 0.033288182851265447 IRDMITEASQTPK Unmodified 1488.7606 0.76062794 3136 Q14197;J3KS15 ICT1 Peptidyl-tRNA hydrolase ICT1, mitochondrial yes no 0 0 1 8 0 1 50.543 50.619 3 1.1724E-07 13783 20230619_1888_Aki_TMTPro18x_K_F8 148.41 121.87 72481 56923 66300 66947 64028 91878 85922 79215 95690 92475 81452 83298 122610 86774 73091 118620 112870 118450 66957 52209 67876 67119 67457 90671 85631 82140 96419 92509 86005 85148 121410 91181 77639 118530 107650 112490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154320000 13760 3136 13007 26364 21180 21180 1 9606 Homo sapiens 0.03579804774904005 IRDPNQGGK Unmodified 983.51484 0.514842 1676;2901;949 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;C9JF13;C9J6B6;C9JHW9;F8WCF2;O95065;B4DXR2;B1AN91;B1AN92;O43432-2;E7EUU4;Q04637-8;E7EX73;E9PGM1;C9J2Z7;C9K073;A0A0A0MSA7;A0A8I5QJH9;A0A804HJV5;A0A8J9G7U8;A0A8I5KT99;A0A0U1RQK7;Q59GJ0;A0A8I5KV92;O43432-4;O43432;O43432-3 EIF4G1;EIF4G1 variant protein;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 0 1 7.5 0.5 1 1 32.692 32.736 3 0.00075731 6414 20230619_1887_Aki_TMTPro18x_K_F7 108.43 75.539 74271 30855 103140 99148 150820 143170 112260 144820 109680 72134 146150 149410 100390 107540 121770 43111 137900 114620 68686 28868 103030 94972 151560 141350 115490 145800 113100 79128 146290 146680 105050 108840 123880 48652 131620 108190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52888000 13761 1676;2901;949 13008 26365;26366 21181;21182 21181 2 9606 Homo sapiens 0.022425174979161966 IRDTQLER Unmodified 1029.5567 0.55670682 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9;H0YHT2;O75037-3;O75037-2;O75037-4;O75037;Q2UVF0 KIF21A;KIF21B Kinesin-like protein KIF21A;Kinesin-like protein;Kinesin-like protein KIF21B yes no 0 0 1 4.5 0.5 1 1 32.887 32.956 3 0.00095585 6679 20230619_1883_Aki_TMTPro18x_K_F4 125.82 59.744 154140 111490 124850 151750 167360 160100 134590 138800 160610 153250 167870 178420 159510 147170 152270 156100 213460 182720 142200 102440 130010 149970 169520 160820 138450 143700 162480 154890 171590 178850 162860 153290 158340 158210 203430 173370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201530000 13762 4170 13009 26367;26368 21183 21183 1 9606 Homo sapiens 0.04311073186431713 IRDVQCTGR Unmodified 1103.5506 0.55057558 2124 A8K9T9;A8K8N7;O15067 PFAS Phosphoribosylformylglycinamidine synthase yes no 0 0 1 7.5 0.5 1 1 30.548 30.604 3 4.6042E-05 5883 20230619_1888_Aki_TMTPro18x_K_F8 153.97 110.2 104510 50672 105620 98125 158160 139870 105390 129600 112730 94505 134230 123550 117980 114050 119830 64130 149990 114970 96402 46876 107880 95682 158440 138030 109670 132080 115240 98291 135940 123760 121120 115320 123140 68306 142970 108780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 163140000 13763 2124 13010 26369;26370 21184;21185 21185 2 9606 Homo sapiens 0.0029423168325592997 IREDCCPGK Unmodified 1133.4958 0.49576282 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;Q9P2J5-3;Q9HAM7;Q9NPU8;B3KXA9 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 0 1 4.5 0.5 1 1 34.713 34.783 3 0.028035 7467 20230619_1885_Aki_TMTPro18x_K_F5 63.426 42.964 21090 11763 25503 28447 29077 38911 23730 27836 43508 26165 31100 53035 38728 53405 30296 34045 72414 94167 19496 10915 25615 27446 29862 38245 24853 29162 42661 27412 32962 52545 39087 54045 33300 37860 69028 88723 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25226000 13764 1603 13011 26371;26372 21186 21186 1 9606 Homo sapiens -0.06564523179667958 IREDCCPGKPLNVFR Unmodified 1859.9135 0.91345696 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;Q9P2J5-3;Q9HAM7;Q9NPU8;B3KXA9 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 0 2 2.5 0.5 1 1 45.954 46.031 4 2.3516E-05 12292 20230619_1882_Aki_TMTPro18x_K_F3 110.57 97.401 403990 363540 398680 403210 370210 429330 398730 423300 406400 343930 302390 251900 291350 230490 431840 297130 275200 215280 373750 333090 405020 404470 387670 432060 400800 430660 409410 349080 314700 259370 304140 242020 427240 293430 264410 205560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 712320000 13765 1603 13012 26373;26374 21187 21187 1 9606 Homo sapiens 0.017896768998753032 IREDLPNLESSEETEQINK Unmodified 2243.0917 0.091734718 4389 Q96QK1;Q53FR4;Q5HYM2 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 yes no 0 0 1 2.5 1.12 1 1 1 1 51.703 51.738 3 1.2649E-24 14905 20230619_1882_Aki_TMTPro18x_K_F3 204.63 181.15 213380 180710 193780 198520 193620 241670 229880 218670 248380 263390 266020 265350 274540 246220 262450 310710 290890 343640 197200 165590 198550 199660 202360 240560 230260 226170 252790 263870 272510 268720 279460 258040 268950 312870 278410 325850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1173700000 13766 4389 13013 26375;26376;26377;26378 21188;21189;21190 21188 3 9606 Homo sapiens 0.019912520429897995 IREEFPDR Unmodified 1060.5302 0.53015772 3381;2562;3176 P04350;B4DE77;M0QYM7;M0R042;B4DP54;Q9BUF5;B4E386;B3KS31;K7ES63;K7ESM5 TUBB4A;TUBB6 Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 0 1 2.5 0.5 1 1 37.682 37.739 3 0.00091101 8670 20230619_1882_Aki_TMTPro18x_K_F3 127.68 92.323 714950 565020 674110 692870 610100 665100 592130 568480 686670 759170 940180 916520 870960 804200 851310 884260 966890 970630 660640 518420 687150 688880 638490 672640 601570 592970 704350 761810 949510 919630 890550 837220 872570 892120 924020 920980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 836570000 13767 3381;2562;3176 13014 26379;26380 21191;21192 21192 2 9606 Homo sapiens 0.0023138429510254355 IREEYPDR Unmodified 1076.5251 0.52507234 3748;1486;1424;3870;3970 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;A1L195;A1L196;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q13885;B2R6L0;A5D907;A5D906;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00 TUBB2B;DKFZp566F223;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB8 Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-8 chain no no 0 0 1 4.5 2.29 1 1 1 1 1 1 1 1 32.864 32.913 3 0.00038026 7100 20230619_1880_Aki_TMTPro18x_K_F1 140.45 96.677 2721700 2071900 2409400 2593200 2934400 3012600 2734200 2836300 3524300 3160400 3867500 3912400 3682000 3254400 3299500 3752300 4276800 3836800 2513200 1901700 2482100 2581400 3001400 3011100 2793400 2918300 3557600 3200200 3943400 3916000 3747300 3403900 3418100 3766400 4079500 3644900 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 56563000000 13768 1424;1486;3748;3870;3970 13015 26381;26382;26383;26384;26385;26386;26387;26388 21193;21194;21195;21196;21197;21198 21193 6 9606 Homo sapiens -0.010129195675290248 IRELGSLPQEAFEK Unmodified 1615.857 0.85697116 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 1 7 0 1 55.165 55.226 3 0.00052046 15859 20230619_1887_Aki_TMTPro18x_K_F7 91.441 62.1 91645 82186 73403 59960 52504 95193 81163 72709 87102 101370 86416 94980 86872 92822 89101 142730 117010 124220 84653 75069 75738 62959 57300 93067 80357 76576 88446 100730 88798 96689 88936 98351 92412 141410 111740 118150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 435660000 13769 4191 13016 26389 21199 21199 1 9606 Homo sapiens 0.07367695606512825 IRELLQQMER Unmodified 1314.7078 0.70780451 277 Q6FHH6;Q53TN2;B2R602;A0A024R3Z5;O43813;E9PHS0;F8WDS9;B4DGM7 LANCL1 LanC-like protein 1 yes no 0 0 1 2 0 1 56.067 56.085 3 0.0001432 17024 20230619_1881_Aki_TMTPro18x_K_F2 117.8 96.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13770 277 13017 26390 21200 21200 1 9606 Homo sapiens 0.06303891502761871 IREPCLK Unmodified 914.50077 0.50077184 1021 A0A0U1RQP1;A0A0D9SFE4;A0A994J7J4;Q05193-3;Q05193;B4DHH5;Q59GI5 DNM1 Dynamin-1 yes no 0 0 1 1 0 1 40.803 40.803 3 0.018944 10443 20230619_1880_Aki_TMTPro18x_K_F1 81.191 49.887 71736 57425 63739 83196 68260 79662 82342 78278 97108 80288 85215 95837 104170 87268 67612 105410 122620 120900 66262 52782 65613 81800 70989 80755 82634 80165 97578 81547 88847 96305 104040 91286 72634 106380 116780 114680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52155000 13771 1021 13018 26391 21201 21201 1 9606 Homo sapiens 0.040101487452375295 IREQAPQPER Unmodified 1222.6418 0.64183343 528 A5YM55;A0A024R8M9;B7Z8Y7;O94762-4;O94762;J3QLU0;J3KS37;Q8WYH5;Q9BW80 RECQL5;PP1045 ATP-dependent DNA helicase Q5 yes no 0 0 1 4 0 1 30.425 30.492 3 0.0003072 5722 20230619_1883_Aki_TMTPro18x_K_F4 111.52 91.866 11331 6571.2 11738 15839 15716 17149 15820 14502 19146 13647 16968 16392 17213 12856 16205 11763 18192 15416 10462 6095.9 11976 15224 16012 17164 16039 14986 19209 13933 17519 16392 17501 13332 16579 12059 17367 14614 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19853000 13772 528 13019 26392 21202 21202 1 9606 Homo sapiens 0.039418186522198084 IREQNLQDIK Unmodified 1255.6884 0.68844927 1741 P35611-3;E7EV99;P35611;P35611-4;P35611-6;P35611-2;A0A804HL01;E7ENY0;H0Y9H2;Q4TT76;H0YFD8 ADD1;LA04NC01-25A3.2-001 Alpha-adducin yes no 0 0 1 6.5 0.5 1 1 43.24 43.327 3 0.00021898 10616 20230619_1887_Aki_TMTPro18x_K_F7 120.57 70.29 345590 290920 313290 351650 359910 371870 325790 289480 361530 361650 410120 397520 377600 354410 371620 419310 439740 400180 319370 266830 321790 350320 369150 372760 331620 303600 368270 362840 417020 400570 386410 370220 382010 419150 419810 380440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 250540000 13773 1741 13020 26393;26394 21203;21204 21204 2 9606 Homo sapiens 0.07083258483498867 IRESFFR Unmodified 953.5083 0.50830006 2688 B7Z4A1;O14949 UQCRQ Cytochrome b-c1 complex subunit 8 yes no 0 0 1 3.5 0.5 1 1 43.253 43.308 3 0.016333 11063 20230619_1882_Aki_TMTPro18x_K_F3 89.55 26.835 271830 238110 248200 282740 373970 352700 341850 343880 458350 224400 256680 260290 236340 220200 248790 254550 250770 275500 251290 218330 256150 282790 377400 351280 349870 348690 451550 234740 272010 261400 242690 230200 252920 256420 240080 261360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 95275000 13774 2688 13021 26395;26396 21205;21206 21205 2 9606 Homo sapiens 0.029686243371884302 IRETGERPSNEEIMR Oxidation (M) 1831.8847 0.88465925 2831 D3DVQ1;O95202 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes no 0 1 2 3 0 1 30.954 31.04 4 0.00076215 5986 20230619_1882_Aki_TMTPro18x_K_F3 83.37 62.981 43243 38289 39865 46342 57464 52611 55900 49469 57427 50026 53087 48925 48778 44310 51084 57501 60480 54579 39980 35113 41074 46215 58164 52685 56469 50787 58231 50513 54469 49597 50065 46542 52458 57389 57736 51892 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54058000 13775 2831 13022 26397 21207;21208 21208 1694 2 9606 Homo sapiens 0.0019923080446915264 IRETGERPSNEEIMR Unmodified 1815.8897 0.88974463 2831 D3DVQ1;O95202 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes no 0 0 2 3 0 1 34.147 34.213 4 2.2972E-07 7256 20230619_1882_Aki_TMTPro18x_K_F3 125.67 107.53 27643 39425 30497 31844 30228 42042 34057 30792 34749 31648 32383 37567 33038 29723 38022 36415 48947 37098 25701 35988 30759 32946 31576 41498 34137 32271 35264 32131 33419 37589 33965 31261 39163 36532 46644 35273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39380000 13776 2831 13022 26398 21209 21209 1 9606 Homo sapiens 0.01443534667100721 IREYFGGFGEVESIELPMDNK Unmodified 2429.1573 0.15731186 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;D6RAF8;B4E0W4 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 1 7 0 1 62.764 62.8 3 5.3005E-08 19096 20230619_1887_Aki_TMTPro18x_K_F7 109.65 100.4 156320 154310 199940 171880 185660 180850 202870 170390 163890 167430 185880 192060 194110 216740 209650 222910 155720 225540 145060 141350 199070 172380 193990 182090 202400 174860 170090 170170 190200 194790 198850 222830 210050 224050 150000 213930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 501400000 13777 759 13023 26399 21210 21210 1 9606 Homo sapiens -0.0001005003568934626 IREYPER Unmodified 961.49813 0.49812931 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 1 3.5 0.5 1 1 31.4 31.475 3 0.0090117 6067 20230619_1883_Aki_TMTPro18x_K_F4 113.5 46.506 51219 33395 49743 53793 64940 62029 61142 63856 80407 56497 61557 66572 64533 57532 58817 60783 73680 63399 47289 30763 50897 52731 66106 62133 62448 64903 80007 57841 64205 66808 65540 59800 60734 61181 70282 60226 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66605000 13778 3610 13024 26400;26401 21211 21211 1 9606 Homo sapiens 0.015840166119460264 IRFQESEERPK Unmodified 1417.7314 0.73137672 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B0AZS1 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 0 2 6.5 0.5 1 1 37.188 37.255 4 0.00037847 8173 20230619_1887_Aki_TMTPro18x_K_F7 109.96 83.417 101500 118300 111290 101370 132650 122090 111980 131380 115650 130970 132680 111300 132360 93686 113920 152070 142080 113620 94180 108080 112450 104200 135310 122270 114330 133450 118420 131700 135150 113440 134110 100350 117920 149610 135480 108430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 312790000 13779 3544 13025 26402;26403 21212 21212 1 9606 Homo sapiens 0.039220285409328426 IRGETLGIIGLGR Unmodified 1353.8092 0.80923311 3029 X5D7T7;H0Y8U5;X5D8Y5;Q4KMQ8;Q13363-2;Q13363;D6RAX2 CTBP1 C-terminal-binding protein 1 yes no 0 0 1 4.5 0.5 1 1 52.706 52.754 3 0.000134 14930 20230619_1885_Aki_TMTPro18x_K_F5 101.62 69 116500 93999 101660 109120 106220 121880 128990 125720 154870 127000 138680 143840 147820 128450 133290 162060 152870 163030 107600 86195 104640 109150 110680 122370 129500 128210 155570 128850 143480 144800 149940 134770 137040 162280 146150 154800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 426150000 13780 3029 13026 26404;26405 21213 21213 1 9606 Homo sapiens 0.14648086196984877 IRGETLGLIGFGR Unmodified 1387.7936 0.79358304 3668 P56545;P56545-3;P56545-2 CTBP2 C-terminal-binding protein 2 yes no 0 0 1 5 0 1 54.716 54.783 3 5.2591E-06 15757 20230619_1885_Aki_TMTPro18x_K_F5 109.83 75.08 108620 104040 103750 106850 98622 102080 113900 105630 114450 129440 126830 124530 136040 103120 124070 155240 140470 135820 100500 95245 105730 107690 103190 103750 114000 108340 117160 129340 129940 125980 137910 109870 127450 153980 134210 129220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1049199999.9999999 13781 3668 13027 26406 21214 21214 1 9606 Homo sapiens 0.11519799679922471 IRGPEESQPPQLYAADEEEAPGTRDPTR Unmodified 3108.4748 0.47483427 4048 Q5RKV6 EXOSC6 Exosome complex component MTR3 yes yes 0 0 2 2.5 0.5 1 1 44.175 44.252 4 6.101199999999999E-39 11806 20230619_1881_Aki_TMTPro18x_K_F2 209.79 192.58 32755 26026 32489 33995 35873 32801 38158 37575 39748 43565 42332 41178 46066 41726 36769 52998 49089 55853 30280 23895 33079 33667 36995 33386 38395 38217 40539 43627 43460 41954 46484 43620 38325 53182 46896 52994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147980000 13782 4048 13028 26407;26408 21215 21215 1 9606 Homo sapiens 0.004935842438044347 IRHEEAQFR Unmodified 1184.6051 0.60505399 2049 Q6PCC8;A8K4P8;Q14146 URB2 Unhealthy ribosome biogenesis protein 2 homolog yes no 0 0 1 5 0 1 29.512 29.586 3 0.070072 5560 20230619_1885_Aki_TMTPro18x_K_F5 60.019 31.811 10035 4199.4 8967.1 8535.6 14321 8938.9 10889 10430 13360 8919.5 10277 9664.7 9727.6 8926.9 13104 9244.6 9578.9 9454 9242.2 3891.7 9266.4 8265.8 14312 9053.5 11250 10513 13338 9125.6 10669 9756.5 10108 9246.4 13049 9310.8 9198.2 8977.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5763500 13783 2049 13029 26409 21216 21216 1 9606 Homo sapiens 0.020135668263037587 IRIEDPPR Unmodified 994.55598 0.55597854 3690 P61160;P61160-2;B4DHK9 ACTR2 Actin-related protein 2 yes no 0 0 1 5.5 0.5 1 1 37.162 37.242 3 0.017388 8353 20230619_1885_Aki_TMTPro18x_K_F5 71.692 17.143 90135 70858 75146 74795 104020 117820 90880 89859 112530 98585 98425 87394 105230 78732 87215 108790 115720 88199 83210 64926 78015 75790 105510 115250 93044 93918 112870 98887 101850 89003 106290 83118 90683 107630 110250 84091 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221970000 13784 3690 13030 26410;26411 21217 21217 1 9606 Homo sapiens 0.05848278537371243 IRLDTEEQLK Unmodified 1243.6772 0.67721588 4270 Q8TCS8;H7C3C5 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes no 0 0 1 4.5 0.5 1 1 46.785 46.844 3 0.0004293 12440 20230619_1885_Aki_TMTPro18x_K_F5 95.618 51.99 241460 188410 209970 247530 244570 292790 270540 281770 301860 278060 281100 278350 304280 243710 280970 306060 272870 279750 222960 173010 216710 245640 252270 292270 272230 288450 304920 281250 290410 281470 308580 255870 285810 305040 261210 265960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 496870000 13785 4270 13031 26412;26413 21218 21218 1 9606 Homo sapiens 0.06512436389380127 IRLENEIQTYR Unmodified 1433.7627 0.76267685 1272 P13645;CON__P13645;A0A1B0GVI3 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 1 7 0 1 45.699 45.786 3 1.1064E-06 11598 20230619_1887_Aki_TMTPro18x_K_F7 163.51 101.51 + 45759 35826 63743 61676 1189600 65434 71579 66012 121330 45307 59037 59444 65432 307600 64779 54666 53665 67785 42439 33006 78229 60186 1106900 69401 138320 66880 119790 47859 63804 68097 68266 294600 65218 59990 51552 64191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357300000 13786 1272 13032 26414 21219 21219 1 9606 Homo sapiens 0.0631460157503625 IRLESEEEGVPSTAIR Unmodified 1784.9268 0.92684164 56 A0A024QZP7;Q5H9N4;P06493;I6L9I5;A0A024QZJ8;P06493-2;E5RIU6;B7Z3D6 CDC2;DKFZp686L20222;CDK1 Cyclin-dependent kinase 1 yes no 0 0 1 3 0.816 1 1 1 45.902 45.961 3 1.9893E-42 12252 20230619_1882_Aki_TMTPro18x_K_F3 272.32 244.67 544450 432400 498150 497160 454430 572010 509890 533560 619890 670980 621950 617800 739680 637060 506920 845600 719240 701320 502990 396490 509280 497900 477810 571790 514530 551240 625900 669210 642840 630610 740400 667340 533170 837310 685990 667710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1632799999.9999998 13787 56 13033 26415;26416;26417 21220;21221;21222 21221 3 9606 Homo sapiens 0.06577529484479783 IRPECFELLR Unmodified 1331.702 0.70199085 2453 B4DDM0;P23443-4;P23443-3;P23443-5;P23443-2;P23443;K7EIM2;Q4G0X7;K7ER06 RPS6KB1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase beta-1 yes no 0 0 1 1 0 1 52.589 52.589 3 0.00037232 15426 20230619_1880_Aki_TMTPro18x_K_F1 110.66 56.979 35729 26979 37252 35601 31125 32836 37209 32556 37345 37230 33093 31891 36596 33203 32825 44319 41244 41625 33033 24778 37610 35215 32953 33412 37174 33425 37886 37220 34304 32683 37088 34788 33973 44170 39383 39562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27836000 13788 2453 13034 26418 21223 21223 1 9606 Homo sapiens 0.04940792991078524 IRPGEQEQYESTIGFK Unmodified 1880.9268 0.92684164 3431 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;P11171-5;Q4VB87;A0A994J847;Q29RX4;A0A2R8YCW8;A0A3B3ITP0;P11171-7;A0A2R8Y5Z6;A0A2R8Y7Y3;A0A2R8Y5G2;P11171-6;A0A2R8Y570;A0A2R8Y420;A0A3B3IU06;A0A2R8YFR9;A0A2R8Y6G5;A0A3B3IUD6;A0A2R8Y7N0;A0A2R8Y6D0;A0A1B0GWG0;A0A2R8Y4N6 EPB41 Protein 4.1 yes no 0 0 1 6 0 1 49.464 49.541 3 3.5979E-11 13691 20230619_1886_Aki_TMTPro18x_K_F6 159.81 127.47 178250 155180 165310 161670 138850 143580 143980 152670 148560 217580 205390 200930 225020 193700 190940 244640 226930 227170 164790 142120 168530 162630 146400 146910 145200 157070 153700 215770 208870 204530 227430 202730 197050 243880 216780 215950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 229830000 13789 3431 13035 26419 21224 21224 1 9606 Homo sapiens 0.021615294844650634 IRPGEYEQFESTIGFK Unmodified 1899.9367 0.93667805 1013 B3KUB6;A0A0C4DH22;A0A1B0GTW6;Q9H4G0-4;Q9H4G0-3;Q9H4G0-2;Q9H4G0;B7Z653 EPB41L1 Band 4.1-like protein 1 yes no 0 0 1 7 0 1 58.047 58.099 3 0.038169 17075 20230619_1887_Aki_TMTPro18x_K_F7 70.197 53.317 42672 31854 35912 48107 36633 38385 43803 39329 49099 42954 51428 48812 45762 42689 59170 51560 48652 52139 39384 29301 37126 47085 38189 39568 43904 40254 49773 43407 52421 49106 47535 44685 59312 51730 46676 49503 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8438200 13790 1013 13036 26420 21225 21225 1 9606 Homo sapiens 0.02270717489841445 IRPTVQEDGGDVIYK Unmodified 1688.8733 0.87334951 2742 C9J8Q1;F8W9P7;H7C537;Q9UMS0-2;Q9UMS0-3;Q9UMS0 NFU1 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial yes no 0 0 1 5 0 1 46.977 47.054 3 7.1386E-06 12505 20230619_1885_Aki_TMTPro18x_K_F5 117.18 84.442 131710 115950 134610 144420 140000 153470 171030 157740 163760 192290 188940 129650 184280 133310 185870 170410 155470 145550 121870 106360 136670 143640 145740 154610 170420 161760 168370 190530 192110 134770 188070 139500 187220 169330 148970 138540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60884000 13791 2742 13037 26421 21226 21226 1 9606 Homo sapiens 0.05646776772618978 IRPVPEYQK Unmodified 1128.6291 0.62914348 3203 O00116;B7Z3Q4;A0A7P0T984;A0A1B0GWA2;A0A7P0TAL3;A0A2R8YEL0;A0A7P0TAU9;B7ZAC5;Q53SN7 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes no 0 0 1 1.5 0.5 1 1 41.167 41.205 3 0.0041494 10357 20230619_1881_Aki_TMTPro18x_K_F2 82.417 50.196 160270 121180 144430 142150 156600 181330 160440 154010 173790 52763 65371 49732 55930 43626 104760 60862 80846 48676 148010 111160 148210 142370 161910 179730 161900 156550 171560 58893 71777 50598 59722 46115 104090 60348 77361 46480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100260000 13792 3203 13038 26422;26423 21227 21227 1 9606 Homo sapiens 0.06997407259973443 IRQDDTSSSINFLTR Unmodified 1751.8802 0.8802258 2885 E5RIJ0;H0YBJ0;I1WZN9;E7EW18;Q53EV2;P06746 POLB DNA polymerase beta yes no 0 0 1 8 0 1 48.841 48.908 3 8.346E-19 13049 20230619_1888_Aki_TMTPro18x_K_F8 168.42 126.33 79390 66691 71130 90932 95239 105180 105130 104500 113970 89049 90036 93165 92731 79644 92786 86969 92162 103140 73359 61246 73445 89982 97294 105230 105650 106390 114590 90983 93667 93923 94571 83015 94285 88205 88262 97755 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61895000 13793 2885 13039 26424 21228 21228 1 9606 Homo sapiens 0.03436089653177987 IRQNEINNPK Unmodified 1224.6575 0.65748349 146 A0A024R1K8;Q15459;Q15459-2 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 1 7.5 0.5 1 1 36.189 36.216 3 0.00019936 7934 20230619_1888_Aki_TMTPro18x_K_F8 121.41 47.25 95920 54014 112870 111360 159750 158180 130100 135920 139900 114790 157610 134800 149990 120340 152570 89383 172440 143190 88652 49975 113920 108250 161240 155810 133240 139780 142580 117810 160410 135470 153390 123090 155820 93552 164600 135540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 163590000 13794 146 13040 26425;26426 21229;21230 21230 2 9606 Homo sapiens 0.054141051692568 IRRDEEGNEIK Unmodified 1357.695 0.69499121 2553 B4DNM0;Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes no 0 0 2 2.5 0.5 1 1 33.361 33.423 4 0.0020308 6972 20230619_1882_Aki_TMTPro18x_K_F3 89.356 39.073 50125 35142 42778 49955 64548 63137 51803 66371 68669 62889 71801 62476 64116 57932 53213 66576 80544 67307 46252 32311 44423 49389 64968 62918 53523 67422 69116 63733 73095 63338 65215 60354 55879 66769 76708 63969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59652000 13795 2553 13041 26427;26428 21231 21231 1 9606 Homo sapiens 0.03045151644209909 IRTEDSEASTCVIIK Unmodified 1720.8665 0.86654957 3975 Q4J6C6-4;Q4J6C6-2;Q4J6C6-3;Q4J6C6 PREPL Prolyl endopeptidase-like yes no 0 0 1 4.5 0.5 1 1 46.31 46.37 3 1.8314E-10 12194 20230619_1885_Aki_TMTPro18x_K_F5 153.24 127.11 54596 46040 57218 53981 54219 51431 52659 56529 63672 69972 65566 58870 72374 59545 57372 85324 75375 65942 50513 42214 57821 53861 56455 52356 53568 57742 64380 69649 67417 60351 72942 62753 59750 84160 71879 62872 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114560000 13796 3975 13042 26429;26430 21232 21232 1 9606 Homo sapiens 0.034950958297258694 IRVDLASETSSR Unmodified 1332.6997 0.69974224 1470 A0A384NL74;P42696;A2A2V2 RBM34 RNA-binding protein 34 yes no 0 0 1 6.5 0.5 1 1 41.766 41.849 3 0.02839 9997 20230619_1887_Aki_TMTPro18x_K_F7 75.618 59.416 64510 47229 51378 52448 75415 82151 76219 60637 149110 34088 29184 29297 35136 31121 44884 35612 36467 32997 59511 43307 53662 52926 76628 80328 78863 62752 142620 36024 35850 30050 36201 32276 44950 35603 34949 31381 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127730000 13797 1470 13043 26431;26432 21233 21233 1 9606 Homo sapiens 0.046700357869895015 IRVDVADQAQDK Unmodified 1356.6997 0.69974224 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;F8VX11;F8VP89;F8VSC7;F8W0K0;F8VYE9 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 1 4 0.816 1 1 1 43.325 43.39 3 2.1556E-05 10964 20230619_1885_Aki_TMTPro18x_K_F5 128.76 84.955 730940 503080 592970 671430 633570 729440 675450 656530 848130 820340 944870 877590 941750 727950 717790 1065600 995260 876690 674150 462270 614920 664790 656880 731410 684020 680270 857920 822160 963900 883990 950340 773650 751050 1053700 948750 835120 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 946460000 13798 2578 13044 26433;26434;26435 21234;21235;21236 21236 3 9606 Homo sapiens 0.035660357869574 IRYESLTDPSK Unmodified 1307.6721 0.67213051 751;3177;4018;4017 K9JA46;P07900;P07900-2;Q2VPJ6;G3V2J8;B4DTA5;Q86SX1;A0A024RD80;P08238;B4DMA2;Q6PK50;Q58FF7;O14942;Q58FF6;Q58FF8 EL52;HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Putative heat shock protein HSP 90-beta 2 no no 0 0 1 7.2 0.748 1 2 2 45.38 45.443 3;4 8.7275E-05 11617 20230619_1888_Aki_TMTPro18x_K_F8 126.83 94.578 1943300 1434900 1594400 1899300 1616100 2127900 1865100 1988100 2381500 2633800 2503700 2793200 3220400 2611300 1471100 4306500 2287900 3147900 1793200 1317900 1651300 1882200 1688100 2130100 1882400 2057500 2404100 2632000 2593600 2824800 3180600 2787700 1588100 4226500 2187100 2999100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 29481000000 13799 3177;751;4017;4018 13045 26436;26437;26438;26439;26440 21237;21238;21239;21240 21240 4 9606 Homo sapiens 0.03060132526752568 ISAEAVGVDISGR Unmodified 1272.6674 0.66737948 4484 Q9C0F1;Q9C0F1-2;D6RGX6 CEP44 Centrosomal protein of 44 kDa yes no 0 0 0 4.5 0.5 1 1 52.014 52.062 3 4.8173E-08 14635 20230619_1885_Aki_TMTPro18x_K_F5 126.32 105.86 69103 59497 62076 69426 64478 66465 74539 71395 80193 76712 79746 82068 83344 64720 80029 78735 77262 82397 63865 54548 63723 69274 67028 67576 74744 72761 81358 77393 82026 82468 84737 68106 81279 79110 73986 78203 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102660000 13800 4484 13046 26441;26442 21241;21242 21242 2 9606 Homo sapiens 0.041952483839850174 ISAEEALQHPYFSDFCPP Unmodified 2106.9357 0.93569177 901 Q6IAW3;A0A090N7W4;Q00535;Q00535-2;A0A0S2Z355 CDK5 Cyclin-dependent-like kinase 5 yes no 0 0 0 5 0.816 1 1 1 62.626 62.66 3 0.014392 19155 20230619_1885_Aki_TMTPro18x_K_F5 55.33 51.942 39134 29780 37431 37955 43587 38874 43739 42597 43963 42211 37816 39949 52517 38684 41009 46244 42289 45400 36157 27340 38250 37680 44712 39349 44099 43251 44566 42611 39747 40617 52544 40377 42002 46289 40471 43119 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109550000 13801 901 13047 26443;26444;26445 21243 21243 1 9606 Homo sapiens -0.07349864941397755 ISANENSLAVR Unmodified 1172.6149 0.61494998 3999 Q53GG0;Q9UHB6;F8VQE1;B4DN52;Q9UHB6-2;Q9UHB6-4;F8VS07;B3KTW2;Q9UHB6-3;Q9UHB6-5;F8VRN8 LIMA1 LIM domain and actin-binding protein 1 yes no 0 0 0 5.5 0.5 1 1 42.66 42.748 2 8.7213E-09 10653 20230619_1885_Aki_TMTPro18x_K_F5 203.02 163.81 234590 174890 206050 221380 200350 230040 213910 203850 252630 245990 230950 206900 266590 190250 195800 305690 281990 224890 216580 160550 211680 219840 209110 231350 216120 211240 254420 245220 239290 211490 267450 202980 205700 300470 268580 214670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 202060000 13802 3999 13048 26446;26447 21244;21245 21244 2 9606 Homo sapiens 0.035547100410212806 ISAPQER Unmodified 799.41882 0.41881635 1483;3577 A0A384NQ21;P61163;B4DM97;B4DXP9;B4DMT4;P42025;Q13841 ACTR1A;ACTR1B Alpha-centractin;Beta-centractin no no 0 0 0 3.5 0.5 1 1 33.888 33.948 2 0.036792 7085 20230619_1883_Aki_TMTPro18x_K_F4 92.187 44.271 171770 92082 220080 223920 262030 312040 229630 270570 214480 183880 310830 357490 276120 265540 284730 140880 349780 317990 158860 85474 220220 216170 267960 307530 233210 276900 222920 195710 313230 351580 283510 270350 292120 154010 333820 300270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152510000 13803 1483;3577 13049 26448;26449 21246;21247 21247 2 9606 Homo sapiens 0.011083696578111812 ISATEDTPEAEGEVPELYHQR Unmodified 2370.0975 0.097548378 1265 A0A6Q8PHL8;A0A6Q8PH45;A0A1B0GUA3;Q96EK5;A0A6Q8PGG2;A0A1B0GUH6 KIAA1279 KIF1-binding protein yes no 0 0 0 1 0 1 49.305 49.305 3 3.6942E-37 14079 20230619_1880_Aki_TMTPro18x_K_F1 232.84 208.43 15452 12985 13943 16940 13252 16765 17230 14247 16873 23038 20532 14535 22118 20854 18705 24344 20661 18208 14279 11919 14301 16772 13942 16904 17127 14971 17386 22557 20922 15379 22374 21478 19220 24050 19732 17368 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68754000 13804 1265 13050 26450 21248 21248 1 9606 Homo sapiens -0.032696494453375635 ISAVSVAER Unmodified 930.51345 0.51344502 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 5.5 0.5 1 1 42.41 42.499 2 0.00051086 10580 20230619_1885_Aki_TMTPro18x_K_F5 148.52 60.883 616740 488800 518840 644840 655780 768630 678630 625420 902790 605730 614390 575320 665480 475400 597590 700350 659610 534430 569420 448820 538120 639620 671920 764340 689330 648500 894700 613070 645850 582490 673940 505750 612810 690630 629650 509820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 563480000 13805 3811 13051 26451;26452 21249;21250;21251 21249 3 9606 Homo sapiens 0.04540883409151775 ISAYSALSHPYFQDLER Unmodified 1995.969 0.96904081 3773 Q00534 CDK6 Cyclin-dependent kinase 6 yes yes 0 0 0 8 0 1 58.28 58.327 3 1.9234E-13 17117 20230619_1888_Aki_TMTPro18x_K_F8 152.32 133.59 28919 26669 30295 34900 38017 42195 32271 30428 37713 33288 33498 29989 37160 27509 37651 33906 38140 38970 26772 24472 30801 34642 38729 41842 33039 31985 37953 33412 34713 30524 37807 28831 38282 34262 36493 36957 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103860000 13806 3773 13052 26453 21252 21252 1 9606 Homo sapiens 0.01089504892865989 ISDDLMQK Unmodified 948.45863 0.45863226 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O43242-2;H0YGV8 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 4.5 0.5 2 2 51.475 51.527 2;3 0.0027589 14709 20230619_1883_Aki_TMTPro18x_K_F4 121.62 62.414 155420 117460 161990 172810 146640 182800 168900 159020 173340 183850 210150 202520 234810 163900 170530 249600 226930 202160 143690 108000 163860 170020 154250 183440 169220 164840 177850 185020 214840 203610 235600 174940 178080 246550 216410 192600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 188710000 13807 2361 13053 26454;26455;26456;26457 21253;21254 21253 2 9606 Homo sapiens -0.017658714537901687 ISDDRLTVVGEK Unmodified 1330.7092 0.70924429 2095 A8K6T5;Q9UBL3-3;Q9UBL3;F5H8F7;B4DPT1;Q9UBL3-2 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes no 0 0 1 4.5 0.5 1 1 46.958 47.018 3 0.015509 12619 20230619_1883_Aki_TMTPro18x_K_F4 66.059 38.578 170270 131540 170330 170040 179680 183590 188370 180030 191100 200050 225550 184700 220010 186680 185890 222110 223700 216340 157390 120770 173140 168750 185980 184580 189570 184710 195930 200640 229250 188480 223100 194390 191920 222200 213620 205570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 241620000 13808 2095 13054 26458;26459 21255 21255 1 9606 Homo sapiens 0.05711804072529958 ISDEDWDIIHR Unmodified 1397.6575 0.65754307 1097 P51659;A0A0S2Z4J1;B2R659;E7EPL9;A0A804HK65;A0A2R8YD50;P51659-2;P51659-3;B4DSD0;A0A804HKU2;E7ER27;A0A2R8YF45;A0A2R8YDT8 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 0 0 0 2 0.816 1 1 1 52.768 52.799 3 2.3896E-12 15655 20230619_1881_Aki_TMTPro18x_K_F2 159.12 132.71 54329 43478 55102 50245 44223 59507 50329 52805 64949 61527 62734 63885 72725 62671 67142 73773 65221 69472 50235 39868 55723 50330 47068 59300 50877 54632 65256 61810 64917 64722 73641 65264 68305 73703 62451 66015 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236710000 13809 1097 13055 26460;26461;26462 21256 21256 1 9606 Homo sapiens -0.02537939621379337 ISDEGIAYLVK Unmodified 1206.6496 0.64960415 3545 P35249;C9JZI1;P35249-2 RFC4 Replication factor C subunit 4 yes no 0 0 0 6.5 0.5 1 1 61.39 61.437 3 0.00023973 18748 20230619_1886_Aki_TMTPro18x_K_F6 107.83 60.57 214500 187050 202810 221710 193490 235990 216370 207020 276520 266570 259800 216820 265790 257100 216110 291860 243130 246330 198340 171510 206990 221240 202640 236880 218700 215110 277670 264870 267240 223940 268950 265560 222550 290000 232390 234440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 527010000 13810 3545 13056 26463;26464 21257;21258 21257 2 9606 Homo sapiens 0.0545453312911377 ISDIQSQLEK Unmodified 1159.6085 0.60846762 4606 Q9NVP1;Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 0 0 6 0 1 53.532 53.61 3 0.00014315 15446 20230619_1886_Aki_TMTPro18x_K_F6 115.57 66.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13811 4606 13057 26465 21259 21259 1 9606 Homo sapiens 0.035047720896727697 ISDQDLNR Unmodified 959.46722 0.46722311 4347 Q99575;Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 0 2 0 1 38.032 38.095 2 0.0065009 8941 20230619_1881_Aki_TMTPro18x_K_F2 110.38 51.458 127040 61832 148520 150200 172610 173710 130700 171910 145210 132000 205010 207570 188350 146370 182470 91609 215850 186850 117340 57426 149400 144580 176090 173690 134900 174600 149390 137770 206810 205090 192360 150260 186960 98587 206000 176570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113540000 13812 4347 13058 26466 21260 21260 1 9606 Homo sapiens -0.01413181492955573 ISDQNIIPSVTR Unmodified 1341.7252 0.72522871 288 Q6Y7W6;Q6Y7W6-5;Q6Y7W6-4;A0A024R4A5;Q6Y7W6-3;I1E4Y6;A0A7I2V361;A0A7I2V3H0;A0A7I2V516;E7ESB6;A0A7I2V3H7;B4DZM1;C9JHW1 GIGYF2;TNRC15 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 0 0 0 8 0 1 52.307 52.384 2 1.5495E-07 14561 20230619_1888_Aki_TMTPro18x_K_F8 175.49 114.7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13813 288 13059 26467 21261 21261 1 9606 Homo sapiens 0.06803510309418925 ISDSEGFK Unmodified 881.41306 0.41306227 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 3.5 0.5 1 1 46.296 46.356 2 0.001092 12472 20230619_1882_Aki_TMTPro18x_K_F3 169.26 89.078 2233800 1476400 2048200 2209700 2640200 2737700 2503500 2486100 3159000 2544100 2827800 2680500 3068900 2568100 2257700 2542800 3358100 2789900 2061600 1358700 2105700 2177200 2691900 2722000 2551800 2558400 3166500 2574000 2925300 2711500 3086800 2652100 2371900 2569100 3198400 2649300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2107799999.9999998 13814 1450 13060 26468;26469 21262;21263 21262 2 9606 Homo sapiens -0.0323877364450027 ISDSVLVDIK Unmodified 1087.6125 0.61249036 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;P48643-2;B4DE30;B4DX08 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 6 0 1 60.051 60.112 3 0.00054206 18189 20230619_1886_Aki_TMTPro18x_K_F6 87.298 55.455 42783 28212 39372 49416 41381 54836 42070 50185 60324 61451 57458 75863 73749 65333 48873 89999 81294 99633 39487 26016 40377 48181 42959 54875 42965 51877 60353 61942 59889 75985 73629 69039 52159 90441 77595 94463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96722000 13815 2633 13061 26470 21264 21264 1 9606 Homo sapiens 0.07218861583373837 ISEAETLCTK Unmodified 1150.554 0.5539892 1819 Q6PGP7;A0A8V8TMA8;A0A8V8TMB2;A0A8V8TLS3;A0A8V8TLT2;A0A8V8TNJ4 TTC37 Tetratricopeptide repeat protein 37 yes no 0 0 0 5 0 1 47.808 47.884 3 0.082566 12863 20230619_1885_Aki_TMTPro18x_K_F5 38.783 20.974 53613 38821 53697 52381 58675 59481 58931 52793 70934 62826 67351 63739 72221 52922 67754 74863 71264 67140 49540 35668 54600 51874 60531 59465 59767 54683 71430 63009 69462 64335 73288 56135 69206 74424 68123 63867 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9774400 13816 1819 13062 26471 21265 21265 1 9606 Homo sapiens -0.01526563053425889 ISEECIAQWK Unmodified 1262.5965 0.59652272 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 0 6 0 1 56.898 56.97 3 7.4144E-10 16844 20230619_1886_Aki_TMTPro18x_K_F6 159.79 83.571 120950 103600 123350 108240 91536 121610 122070 126940 135470 132770 126950 132820 135320 122180 132140 123780 136690 155310 111890 94887 124560 109220 98574 122070 121790 129430 136920 133870 131080 134410 137740 126500 134630 126160 130870 147120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 380050000 13817 1102 13063 26472 21266 21266 1 9606 Homo sapiens -0.024271679252024114 ISEIEDAAFLAR Unmodified 1333.6878 0.68778057 1421;2318 E5RHW4;A0A384ME54;O94905;B2RDK6;O75477;B4DPN7;B0QZ43 ERLIN2;ERLIN1 Erlin-2;Erlin-1 no no 0 0 0 4 0 1 61.85 61.854 3 0.0034971 19093 20230619_1883_Aki_TMTPro18x_K_F4 81.709 60.97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13818 1421;2318 13064 26473 21267 21267 1 9606 Homo sapiens 0.034284190437801954 ISELDAFLK Unmodified 1034.5648 0.56481189 1053 A0A384NQ35;A0A0K0K1L8;Q06323-3;Q06323;Q06323-2;Q6FHU3 PSME1 Proteasome activator complex subunit 1 yes no 0 0 0 7 0 1 63.172 63.204 3 0.00102 19278 20230619_1887_Aki_TMTPro18x_K_F7 83.623 48.471 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13819 1053 13065 26474 21268 21268 1 9606 Homo sapiens 0.048912073831616 ISELGAGNGGVVFK Unmodified 1346.7194 0.71941505 1774 A0A8I5KVF6;A0A8I5QJL9;A0A8I5QJ96;A0A8I5KYS7;B4DFY5;A4QPA9;A0A8I5KYB4;Q02750-2;Q02750;A0A8I5KRX5;A0A8I5QJC1;A0A8I5KXN4;A0A8I5QJP8 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 yes no 0 0 0 1 0 1 57.816 57.816 3 0.0012704 17600 20230619_1880_Aki_TMTPro18x_K_F1 58.32 41.688 29597 32505 32389 34227 23419 37576 32656 38052 31305 34971 34579 29436 43137 34241 40934 47295 46904 40169 27448 29750 32561 34485 25358 37734 32383 38739 32121 35332 35676 30356 43640 35860 42024 46899 44773 38253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69650000 13820 1774 13066 26475 21269 21269 1 9606 Homo sapiens 0.05992411797751629 ISELSLCDLAGSER Unmodified 1548.7454 0.7453718 3349 O95235;O95235-2 KIF20A Kinesin-like protein KIF20A yes no 0 0 0 4 0 1 59.927 59.929 3 0.0010716 18293 20230619_1883_Aki_TMTPro18x_K_F4 87.519 43.202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13821 3349 13067 26476 21270 21270 1 9606 Homo sapiens -0.007051068129385385 ISEMLLGPVPPSFAFLPK Unmodified 1942.0638 0.063792816 2324 B2RDV7;Q96G46;D6W636;Q96G46-3 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)];tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes no 0 0 0 5 0 1 66.373 66.416 3 0.084191 20721 20230619_1885_Aki_TMTPro18x_K_F5 44.998 32.87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13822 2324 13068 26477 21271 21271 1 9606 Homo sapiens 0.13044347110485432 ISEQFTAMFR Oxidation (M) 1244.586 0.58595803 3748;1486;3381;983;1424;3870;1954 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;B4DMJ5;Q6P602;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;P04350;B4DJ43;B4DE77;B4DFH6;A4UCU2 TUBB3;TUBB2B;TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB4A Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-4A chain no no 0 1 0 4.2 2.79 1 1 1 1 1 54.029 54.073 2 0.010542 16016 20230619_1880_Aki_TMTPro18x_K_F1 72.478 60.612 582200 359150 500750 648170 552550 690710 603890 598120 734340 684020 759890 817720 767350 681660 768680 759020 748920 907400 536890 331440 517230 630610 572240 692430 609930 619970 741560 690930 779260 819240 783100 711760 780530 769850 717850 859700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1521099999.9999998 13823 983;1424;1486;3748;3870;3381;1954 13069 26478;26479;26480;26481;26482 21272;21273;21274 21272 553 3 9606 Homo sapiens -0.02655150579630572 ISEQFTAMFR Unmodified 1228.591 0.59104341 3748;1486;3381;983;1424;3870;1954 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;B4DMJ5;Q6P602;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;P04350;B4DJ43;B4DE77;B4DFH6;A4UCU2 TUBB3;TUBB2B;TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB4A Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-4A chain no no 0 0 0 2.5 0.5 1 1 61.556 61.576 2 5.289E-14 19069 20230619_1882_Aki_TMTPro18x_K_F3 236.89 180.51 2669600 1721100 2369300 2705000 1825000 3349100 2635600 2633300 3281700 3548900 3308700 3835600 3763500 3402000 3379900 3577100 3779600 4686400 2463000 1585000 2427400 2657000 1972800 3316400 2630800 2764100 3309500 3546800 3416900 3862800 3810000 3533800 3467000 3653300 3618700 4436100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6620399999.999999 13824 983;1424;1486;3748;3870;3381;1954 13069 26483;26484 21275;21276;21277 21277 3 9606 Homo sapiens -0.01410846717021741 ISEQTYQLSR Unmodified 1223.6146 0.61461563 1274 P61764-2;P61764;A0A1B0GVQ5;A0A1B0GWF2;A0A1B0GTP9;A0A0D9SG72;A0A2R8Y5D4;B7Z2V7;B7Z1V5;B7Z3F4;Q59GC9 STXBP1 Syntaxin-binding protein 1 yes no 0 0 0 7 0 1 44.023 44.106 2 0.0044323 10947 20230619_1887_Aki_TMTPro18x_K_F7 105.98 74.603 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13825 1274 13070 26485 21278 21278 1 9606 Homo sapiens 0.011752903211800003 ISEVLQK Unmodified 815.47527 0.4752686 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 7.5 0.5 1 1 51.473 51.551 2 0.074614 14278 20230619_1887_Aki_TMTPro18x_K_F7 79.116 8.2035 165880 119460 141220 164880 188400 211120 205550 205500 267190 221760 235860 240430 260050 248610 220620 240560 289450 266150 153080 109790 146400 163320 192590 209780 208050 210710 267340 223980 244520 243500 263040 255670 228920 243280 276120 252610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 450100000 13826 673 13071 26486;26487 21279 21279 1 9606 Homo sapiens 0.06014997494480667 ISEYSEAAITIR Unmodified 1351.6983 0.69834526 1002 A8K6X3;A0A0C4DG89;Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 5.5 0.5 1 1 53.346 53.42 2 8.7431E-11 15241 20230619_1885_Aki_TMTPro18x_K_F5 212.82 172.71 94322 71574 83854 98545 94681 103080 101800 93957 107410 119270 109800 107530 116920 98486 103750 123680 118670 133160 87097 65763 86306 97318 97685 103670 102390 97321 109300 118810 112840 109390 118480 103260 106670 124340 113500 126320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85043000 13827 1002 13072 26488;26489 21280 21280 1 9606 Homo sapiens 0.03656401698231093 ISFEEFER Unmodified 1055.4924 0.49237523 4750 Q9Y5Q9;F8WC64;A0A494C1S7;Q9Y5Q9-2;H0YFI7 GTF3C3 General transcription factor 3C polypeptide 3 yes no 0 0 0 3 0 1 55.936 55.977 2 0.0052015 16766 20230619_1882_Aki_TMTPro18x_K_F3 114.2 57.932 98022 83314 96000 107340 93398 124400 112960 111270 126670 111530 108480 107710 120500 101110 113480 125230 117590 122070 90645 76462 97754 106630 97921 124130 113170 114590 127520 112630 112700 109330 122270 105800 115810 125250 112500 115960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84121000 13828 4750 13073 26490 21281 21281 1 9606 Homo sapiens -0.03315126690381476 ISFPAIQAAPSFSNSFPQIFR Unmodified 2324.1954 0.19535235 401 P23381;A0A024R6K8;P23381-2;H0YJP3 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 0 0 8 0 1 65.42 65.439 3 1.2186E-11 20156 20230619_1888_Aki_TMTPro18x_K_F8 132.14 123.97 6522.6 5968.1 6835.1 8198.3 5679.2 5753.1 8044.2 7634.5 8971.4 8832.2 8837.7 9697 7452.1 7072.3 8819.1 9930.1 7500.3 9426.3 6038.1 5479.7 6908.6 8063.3 6048.4 6047.2 8002.1 7706.9 9079.5 8884.4 9022.2 9713.7 7718.3 7527.7 8878.6 9901.4 7202.4 8951.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39980000 13829 401 13074 26491 21282 21282 1 9606 Homo sapiens 0.08622248731944637 ISGADINSICQESGMLAVR Unmodified 2019.9718 0.9717597 2016 A8K2M0;P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 7 0 1 60.864 60.907 3 5.096800000000001E-25 18177 20230619_1887_Aki_TMTPro18x_K_F7 210.98 186.1 37658 27326 32355 39481 29177 35161 37853 38398 40568 62848 66246 72803 89540 75370 52248 88658 80467 87383 34756 25126 33309 38801 30824 35944 37772 39665 42298 62479 67777 73554 88879 78361 55545 88699 76765 82985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141410000 13830 2016 13075 26492 21283 21283 1 9606 Homo sapiens 0.0025726896381002007 ISGAIGPCVSLNSK Unmodified 1401.7286 0.72859953 2974 F5H365;Q15436;B4DSQ5;B4E0Q9;B4DF60;Q15436-2 SEC23A Protein transport protein Sec23A yes no 0 0 0 2.5 0.5 1 1 54.272 54.308 3 0.00090758 16081 20230619_1882_Aki_TMTPro18x_K_F3 82.515 67.566 202470 221780 303330 239480 239620 338010 279730 301290 348990 318460 240190 246240 361590 277760 253180 286000 276420 280540 188390 203030 298500 241900 255410 333340 282000 310560 347500 318900 256830 254210 359870 286140 260800 286920 264280 266500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135560000 13831 2974 13076 26493;26494 21284 21284 1 9606 Homo sapiens 0.04380437091776912 ISGETIFVTAPHEATAGIIGVNR Unmodified 2352.2438 0.24375911 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 4.5 3.5 1 1 59.077 59.098 3 1.2931E-74 17428 20230619_1888_Aki_TMTPro18x_K_F8 293.09 270.43 105520 81601 94857 98274 80060 98842 103060 99054 100340 115370 96925 106560 110260 99540 112960 125020 103600 113340 97456 74865 97058 97907 85028 99899 102520 101630 102360 115430 100300 108310 112270 104220 114380 124550 99286 107740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 351230000 13832 826 13077 26495;26496 21285;21286 21286 2 9606 Homo sapiens 0.12172697581172542 ISGLGLTPEQK Unmodified 1141.6343 0.63428844 1627 O95831;O95831-3;A0A6Q8PFM5;A0A6Q8PG15;A0A6Q8PFE1;A0A7I2PK44;A0A6Q8PHJ9;A0A6Q8PHC0;A0A6Q8PFA7;A0A6Q8PFS4;A0A6Q8PFQ8;A0A7I2RLJ8;O95831-4;A0A6Q8PF87;A0A6Q8PFN1 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 0 7 0 1 53.307 53.375 2 0.014829 15076 20230619_1887_Aki_TMTPro18x_K_F7 77.662 22.279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13833 1627 13078 26497 21287 21287 1 9606 Homo sapiens 0.0691366633193411 ISGLIYEETR Unmodified 1179.6136 0.61355299 2211 B2R4R0;P62805;Q0VAS5;Q6B823 HIST1H4H;HIST1H4A Histone H4 yes no 0 0 0 4.73 1.91 1 2 2 2 2 1 1 54.745 54.798 2;3 2.2816E-06 15702 20230619_1885_Aki_TMTPro18x_K_F5 166.66 142.69 2544500 2263400 2559900 2652200 2391000 3079000 2938900 2638300 2624200 2977000 2899300 2518800 3086900 2239800 3613300 2374600 2829900 2531000 2354200 2075000 2598000 2652300 2513500 3070300 2922000 2735400 2704200 2976100 2969600 2568100 3165600 2329400 3614600 2397200 2713200 2403400 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 97285000000 13834 2211 13079 26498;26499;26500;26501;26502;26503;26504;26505;26506;26507;26508 21288;21289;21290;21291;21292;21293 21291 6 9606 Homo sapiens 0.03093075952278923 ISGQVVR Unmodified 757.44464 0.44463717 3892 Q4ZG57;Q14566 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 7 0 1 36.194 36.262 2 0.059596 7783 20230619_1887_Aki_TMTPro18x_K_F7 81.89 25.768 65597 32866 74433 74594 85718 95662 71195 88217 94581 64679 92375 97223 89379 76792 88311 44734 97385 86785 60576 30480 75036 72102 87782 94868 73418 89966 94821 67659 94783 96453 91266 78231 90064 47983 93016 82022 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52226000 13835 3892 13080 26509 21294 21294 1 9606 Homo sapiens 0.05621263900093254 ISGSILNELIGLVR Unmodified 1482.877 0.87697832 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 5 0 1 66.826 66.869 2 3.1815E-06 20914 20230619_1885_Aki_TMTPro18x_K_F5 158.3 138.02 17906 11992 16329 16260 15086 11440 15380 17042 15223 17804 22864 20234 17853 17120 16772 22697 20959 19680 16526 11023 16690 16015 15736 12076 15506 17045 15821 18011 22859 20347 18342 18040 17339 22533 20004 18728 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25383000 13836 2126 13081 26510 21295 21295 1 9606 Homo sapiens 0.15485491337130952 ISGSLVDTSYK Unmodified 1168.5976 0.59756858 2632 B4DZG6;Q9BTX1-6;Q9BTX1-5;Q9BTX1-2;Q9BTX1;Q9BTX1-3 NDC1 Nucleoporin NDC1 yes no 0 0 0 8 0 1 52.264 52.341 2 3.1426E-11 14541 20230619_1888_Aki_TMTPro18x_K_F8 168.74 150.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13837 2632 13082 26511 21296 21296 1 9606 Homo sapiens 0.020013697153899557 ISGTVNIR Unmodified 858.49232 0.49231565 2326 P26639;Q53GX7;B2RDX5;P26639-2;B4DKZ9 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 1.5 0.5 1 1 41.847 41.886 2 0.0010407 10913 20230619_1880_Aki_TMTPro18x_K_F1 150.35 98.333 363970 278960 312950 353380 324430 320750 335250 318210 413340 411680 476960 478540 489780 388850 393020 444640 528270 503150 336030 256080 322480 350310 336320 326920 339880 327950 419190 413080 486790 479680 494760 407200 409070 449060 503960 477370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 275290000 13838 2326 13083 26512;26513 21297;21298 21297 2 9606 Homo sapiens 0.05740918100275394 ISHGEVLEWQK Unmodified 1324.6776 0.67755023 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1;Q7Z4Y3 SRRT Serrate RNA effector molecule homolog yes no 0 0 0 6.5 0.5 1 1 48.58 48.663 3 0.0085202 13351 20230619_1886_Aki_TMTPro18x_K_F6 68.786 45.641 218420 160610 243920 246840 227350 267050 260030 272050 278630 315390 290190 281420 258050 241690 249660 305730 375320 294290 202040 147780 245460 242390 238370 268470 260980 278660 283470 315270 295730 285870 264310 253930 261230 305400 357330 279930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 561990000 13839 4464 13084 26514;26515 21299 21299 1 9606 Homo sapiens 0.028198561092267482 ISHLFFHK Unmodified 1027.5603 0.56033563 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8;F5H2X1;B7Z842;H3BUV0;H3BTM1;H3BRA2;H3BQD1 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 5 0 1 48.444 48.521 4 0.0021794 13132 20230619_1885_Aki_TMTPro18x_K_F5 114.28 73.092 67642 12939 66227 66426 62109 58436 66959 71556 90986 34033 30905 20633 27614 21609 44061 30360 32056 24948 62236 12394 67314 62493 64932 59899 67960 71195 88750 36092 34355 21661 29079 22737 43773 30110 30738 23779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20460000 13840 1601 13085 26516 21300 21300 1 9606 Homo sapiens 0.04765787750943673 ISHLPLVEELR Unmodified 1304.7452 0.74523587 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 6 0 1 53.287 53.365 3 0.00064454 15391 20230619_1886_Aki_TMTPro18x_K_F6 78.903 58.599 26319 19464 22818 22221 22085 26089 25454 26528 37066 24112 24997 24473 27278 23600 24887 29931 28859 23740 24295 17851 23458 22277 23132 26096 25822 26999 36580 24539 26309 24818 27668 24695 25594 29619 27538 22633 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74243000 13841 2702 13086 26517 21301 21301 1 9606 Homo sapiens 0.10505306040022333 ISHLVLPVQPENALK Unmodified 1656.9563 0.95629128 955 A0A0A0MSK5;Q5JTV8;Q5JTV8-3;J3KN66;Q5JTV8-2 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 0 0 0 2 0 1 57.019 57.035 3 6.9932E-06 17411 20230619_1881_Aki_TMTPro18x_K_F2 118.51 102.62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13842 955 13087 26518 21302 21302 1 9606 Homo sapiens 0.15409138291283853 ISHQNYIAYQK Unmodified 1363.6884 0.68844927 2708 B7ZKS3;Q86UV5;Q86UV5-8;Q86UV5-6 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes no 0 0 0 2 0 1 42.286 42.366 3 6.0514E-05 10886 20230619_1881_Aki_TMTPro18x_K_F2 128.01 111.34 101920 70167 109510 105410 128490 124700 128000 136560 132490 110840 140930 121720 119810 99289 129550 111990 134930 112820 94210 64563 110860 103810 131770 124890 129280 137960 134950 113720 143180 122410 123380 103840 131750 112450 128900 107230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49247000 13843 2708 13088 26519 21303;21304 21303 2 9606 Homo sapiens 0.02115258483490834 ISHWDGVIR Unmodified 1081.5669 0.56687757 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;B4DE53;I6L959;Q9BTW9-5;A0A804HIC0;A0A804HL21;A0A804HJU6;I3L439;I3L163;I3L0V3;I3L3H4;I3L4D2;I3L143;I3L131;A0A804HJ99;Q9BTW9-3 TBCD Tubulin-specific chaperone D yes no 0 0 0 8 0 1 45.015 45.043 3 4.9046E-16 11499 20230619_1888_Aki_TMTPro18x_K_F8 182.29 86.791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13844 1722 13089 26520 21305 21305 1 9606 Homo sapiens 0.029356809116507065 ISIFNEHK Unmodified 986.51853 0.5185304 2251 B2R7X3;Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes no 0 0 0 1 0 1 48.154 48.154 3 0.0030157 13601 20230619_1880_Aki_TMTPro18x_K_F1 101.65 59.359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13845 2251 13090 26521 21306 21306 1 9606 Homo sapiens 0.024731872717552505 ISIMAER Unmodified 818.43202 0.43202358 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;A0A804HJI0;A0A804HJA1;A0A804HKK7;H7C3W8 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 6 0 1 45.886 45.972 2 0.013548 12107 20230619_1886_Aki_TMTPro18x_K_F6 101.41 45.321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13846 1723 13091 26522 21307 21307 1 9606 Homo sapiens 0.015544844455462226 ISIPDVGLHLK Unmodified 1190.7023 0.70230842 3815 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 2 0 1 59.22 59.233 3 0.00052454 18340 20230619_1881_Aki_TMTPro18x_K_F2 95.477 65.944 55208 37616 52406 44910 48829 57020 61481 59417 66217 54238 58805 53641 57513 45797 63205 64083 60567 59157 50975 34527 53380 44947 51368 56784 61399 60382 66845 55087 60615 54268 58989 48475 64031 63825 57966 56245 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4820500 13847 3815 13092 26523 21308 21308 1 9606 Homo sapiens 0.11458535982615103 ISKEEAMR Unmodified 962.48552 0.48551571 3733 Q5VVC8;Q08ES8;Q5VVD0;P62913-2;P62913 RPL11 60S ribosomal protein L11 yes no 0 0 1 5.5 0.5 1 1 37.808 37.892 3 0.063723 8676 20230619_1886_Aki_TMTPro18x_K_F6 54.539 35.561 351410 217680 463390 412110 590760 437910 505560 497080 394830 419070 544580 289980 243060 165060 510630 97842 191550 86961 325310 201030 462760 400470 598870 442460 511560 501550 414310 423380 537230 296330 269510 171120 494630 100250 185640 83095 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 521990000 13848 3733 13093 26524;26525 21309 21309 1 9606 Homo sapiens 0.0027723715739966792 ISKPAPYWEGTAVIDGEFK Unmodified 2107.0626 0.062606842 3838 V9HW63;Q13162;A6NG45 HEL-S-97n;PRDX4 Peroxiredoxin-4 yes no 0 0 1 8 0 1 61.176 61.208 3 0.00033546 18281 20230619_1888_Aki_TMTPro18x_K_F8 72.568 62.422 128880 110020 115230 128050 123110 99402 136210 131610 71616 145260 137110 98580 111580 89602 159830 98809 81989 71741 119100 100870 118340 127520 127160 103570 134680 132610 79526 144420 136360 101930 116800 93238 157050 97863 79128 68465 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103710000 13849 3838 13094 26526 21310 21310 1 9606 Homo sapiens 0.05335804275227929 ISLADIAQK Unmodified 957.5495 0.54949617 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O43242-2 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 8 0 1 57.374 57.426 3 0.0002032 16722 20230619_1888_Aki_TMTPro18x_K_F8 125.82 52.153 84095 63695 70511 79835 72396 82246 83424 82659 90173 92614 91359 90470 103850 82017 80447 105060 96174 95343 77620 58466 72847 79327 75396 82990 83691 84688 91570 92993 94199 91681 104440 86119 83219 104600 91860 90663 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171810000 13850 2361 13095 26527 21311 21311 1 9606 Homo sapiens 0.06902340585986622 ISLAPTDVK Unmodified 942.5386 0.53859714 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;A0A024QZ91;A0A024QZC0 ATXN2L Ataxin-2-like protein yes no 0 0 0 7.33 0.471 2 1 51.694 51.769 2;3 0.00027882 14374 20230619_1887_Aki_TMTPro18x_K_F7 141.48 85.804 221140 172630 192230 220310 179660 197560 189580 220780 239670 214730 215770 246640 240750 206860 225440 258710 275590 259460 204200 158460 197630 218280 188030 202030 192260 223770 240370 218300 223820 247560 244280 217400 232450 259100 263090 246490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 384380000 13851 4285 13096 26528;26529;26530 21312;21313 21312 2 9606 Homo sapiens 0.06502938211713172 ISLGLPVGAVINCADNTGAK Unmodified 1969.0303 0.030260856 153 Q9BTQ7;A0A024R1Q8;P62829;C9JD32;B9ZVP7;J3KT29 RPL23 60S ribosomal protein L23 yes no 0 0 0 2.33 0.471 2 1 62.854 62.873 3 3.8051E-45 19857 20230619_1881_Aki_TMTPro18x_K_F2 257.15 239.66 107120 85579 98527 101620 87874 113560 97097 103050 116730 113950 105790 97784 134510 100720 98451 137290 119790 126050 98966 78494 100670 101480 92549 113660 98022 106270 117440 114120 110220 100190 134590 105800 102140 136620 114450 119820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5146600000 13852 153 13097 26531;26532;26533 21314;21315 21314 2 9606 Homo sapiens 0.08450693600661907 ISLGMPVGPNAHK Unmodified 1319.702 0.70199085 3850 Q13435;E9PPJ0;Q7Z3K9;H0YEX5 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 0 3.5 0.5 1 1 49.946 50.001 3 2.0573E-06 13975 20230619_1883_Aki_TMTPro18x_K_F4 137.84 110.48 279400 235300 265600 304280 247480 305500 309170 313920 315520 347410 328060 324870 345830 293070 315170 367700 335910 351160 258300 215970 270970 301600 260370 308920 308430 321020 321790 348530 336780 329790 350930 307330 322470 367240 321300 333660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 477140000 13853 3850 13098 26534;26535 21316 21316 1 9606 Homo sapiens 0.05492792991094575 ISLNSLCYGDMDK Oxidation (M) 1530.6694 0.66942967 561 O75131;A0A024R994;Q05DL8;A0A087WYQ3;H0YB26 CPNE3 Copine-3 yes no 0 1 0 7 0 1 56.737 56.795 3 4.2547E-06 16478 20230619_1887_Aki_TMTPro18x_K_F7 123.95 111.97 57774 47117 55254 66292 65303 59249 66281 64872 67957 67212 76014 76490 71716 65393 68008 88997 75725 93416 53402 43290 56542 65258 66953 60599 66833 65976 69457 68070 77431 76902 73188 69050 69773 89229 72501 88616 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236860000 13854 561 13099 26536 21317 21317 328 1 9606 Homo sapiens -0.07467826984748172 ISLNSLCYGDMDK Unmodified 1514.6745 0.67451505 561 O75131;A0A024R994;Q05DL8;A0A087WYQ3;H0YB26 CPNE3 Copine-3 yes no 0 0 0 7 0 1 60.102 60.148 3 3.7607E-07 17877 20230619_1887_Aki_TMTPro18x_K_F7 115.12 103.14 114530 85672 102100 119400 98221 118240 126100 117830 122290 122220 129290 144680 147460 120570 135100 141170 135380 154560 105750 78732 104830 117750 103140 119590 125400 120590 125090 123950 133240 145010 149280 126280 137650 142270 129660 146590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97406000 13855 561 13099 26537 21318 21318 1 9606 Homo sapiens -0.06223523122116603 ISLPGQMAGTPITPLK Oxidation (M) 1638.9015 0.90147851 2464 B4DQF1;B4DEI4;B4DNR1;Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 GORASP2 Golgi reassembly-stacking protein 2 yes no 0 1 0 3.5 0.5 1 1 59.476 59.492 3 0.00014009 18231 20230619_1882_Aki_TMTPro18x_K_F3 90.561 75.021 19178 19000 20242 27043 21534 23644 24982 23709 31328 23413 25261 29493 30540 28836 27035 35447 28651 35297 17765 17448 20537 26588 22361 24163 25175 24229 31292 23884 26464 29653 30859 30098 27692 35480 27444 33503 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162290000 13856 2464 13100 26538;26539 21319 21319 1518 1 9606 Homo sapiens 0.10758383428333218 ISLPGQMAGTPITPLK Unmodified 1622.9066 0.90656389 2464 B4DQF1;B4DEI4;B4DNR1;Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 GORASP2 Golgi reassembly-stacking protein 2 yes no 0 0 0 4 0 1 61.918 61.923 3 1.0846E-06 19141 20230619_1883_Aki_TMTPro18x_K_F4 119.45 97.4 42910 32765 41146 43975 33584 46386 42213 49417 65167 49368 54939 52300 58730 61507 47210 60946 67574 66593 39647 30096 41858 43519 35837 46757 42789 50253 64617 50036 56975 53309 59379 63072 49407 61535 64451 63194 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 377030000 13857 2464 13100 26540 21320 21320 1 9606 Homo sapiens 0.12002687290964786 ISLPIEDYFNK Unmodified 1337.6867 0.68671794 2636 B7Z8A5;B7ZAI3;B4E014;Q9UBD5;Q9UBD5-2 ORC3 Origin recognition complex subunit 3 yes no 0 0 0 1 0 1 63.532 63.532 3 0.0001268 19917 20230619_1880_Aki_TMTPro18x_K_F1 117.52 87.887 21101 21091 20925 24700 22188 25703 24657 22888 29076 25695 29554 27976 29381 24353 31785 31588 30530 32182 19537 19328 21315 24658 23027 25853 24852 23665 29375 25897 30290 28192 30100 25626 32209 31661 29234 30554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6456500 13858 2636 13101 26541 21321 21321 1 9606 Homo sapiens 0.03138204674883127 ISLPLPNFSSLNLR Unmodified 1569.8879 0.88787736 3414 P08670;V9HWE1;Q53HU8;B0YJC4 VIM;HEL113 Vimentin yes no 0 0 0 6.8 0.748 2 2 1 64.359 64.393 2;3 2.906E-16 20084 20230619_1886_Aki_TMTPro18x_K_F6 194.98 170.12 426300 347540 355300 303710 723900 882750 566720 590340 724280 315400 288140 237760 279400 244620 408020 283760 298960 221630 393630 317930 372250 318000 719660 841780 584780 615150 710580 332230 315740 245530 291720 254120 405900 281520 286560 211440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5658600000 13859 3414 13102 26542;26543;26544;26545;26546 21322;21323 21322 2 9606 Homo sapiens 0.12572893711444522 ISLPVILMDETLK Unmodified 1470.8368 0.83675299 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9;B1PM99;A0A0C4DH86 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 0 0 8 0 1 65.669 65.688 3 3.7049E-07 20223 20230619_1888_Aki_TMTPro18x_K_F8 144.57 115.6 20628 17898 23748 27492 21518 25876 28596 25367 25677 26585 28413 29621 36768 26489 31283 36066 31050 38135 19106 16457 23861 26939 22710 26260 28331 26003 26442 26891 29402 29843 36963 27959 31923 36186 29760 36173 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21369000 13860 1076 13103 26547 21324 21324 1 9606 Homo sapiens 0.12016808622342978 ISMPDVDLHLK Oxidation (M) 1282.6591 0.65912298 3815 Q09666;Q8N274;B4DTV0 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 1 0 6 0 1 51.186 51.263 3 0.00023909 14365 20230619_1886_Aki_TMTPro18x_K_F6 101.71 68.623 156950 116440 133430 122610 134960 142400 154190 158390 182640 163110 186380 196520 177530 162180 200840 200910 198780 232420 144860 106720 137450 123700 140620 142930 155250 160800 184500 165610 190800 196860 182650 170450 203720 203030 190450 220300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143170000 13861 3815 13104 26548 21325 21325 2498 1 9606 Homo sapiens 0.029099781429977156 ISMPDVDLHLK Unmodified 1266.6642 0.66420836 3815 Q09666;Q8N274;B4DTV0 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 7.5 0.5 1 1 57.848 57.899 3 0.0011913 16973 20230619_1887_Aki_TMTPro18x_K_F7 88.987 57.557 171420 133150 154060 134700 126620 154660 173510 184280 194820 192360 185480 202990 211970 177910 192980 240820 224810 244940 158330 121970 157450 136350 135120 155580 172940 186340 196930 194250 192040 204780 214620 187700 198600 241060 214920 232530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56543000 13862 3815 13104 26549;26550 21326 21326 1 9606 Homo sapiens 0.04154282005629284 ISMPDVDLHVK Unmodified 1252.6486 0.64855829 3815 Q09666;B4DTV0 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 7 0 1 55.158 55.219 3 0.0012173 15803 20230619_1887_Aki_TMTPro18x_K_F7 88.734 56.211 616200 406590 615590 656570 599910 792460 729320 722680 854600 891800 1028000 1118800 1078400 924170 808500 768070 1251400 1241900 569090 374530 625640 643900 628970 788720 731870 747670 870420 899070 1049000 1117800 1086600 952110 851000 801050 1193000 1174600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 298450000 13863 3815 13105 26551 21327 21327 1 9606 Homo sapiens 0.032339954885628686 ISMPEVDLNLK Oxidation (M) 1273.6588 0.65878863 3815 Q09666;Q6ZQN2;Q13727 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 1 0 6 0 1 56.645 56.717 3 0.0040187 16742 20230619_1886_Aki_TMTPro18x_K_F6 71.066 13.917 50335 40220 50787 41384 40449 47490 50166 65677 64023 60299 63675 68612 62541 58556 72239 56676 61222 75819 46540 36843 51344 41850 43135 47980 50505 65625 64407 61454 65356 68902 64347 60639 72597 58109 58784 71757 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82940000 13864 3815 13106 26552 21328 21328 2499 1 9606 Homo sapiens 0.03290558423123002 ISMQELEELRK Unmodified 1374.7177 0.71770049 1724 A0A804HK74;F2Z2B9;B3KRS1;A0A804HI27;A0A804HL95;A0A804HJQ4;A0A804HJS9;Q53EQ3;A0A804HJ08;A0A804HJH7;Q9BSJ2;Q9BSJ2-4;A0A804HLH6 TUBGCP2 Gamma-tubulin complex component 2 yes no 0 0 1 6 0 1 55.221 55.297 3 0.000365 16151 20230619_1886_Aki_TMTPro18x_K_F6 101.39 84.855 82594 65721 71461 76335 70455 78895 80681 76536 86068 88531 83008 82882 96931 79788 93361 98723 89011 93699 76274 60268 73534 76269 73569 79546 80926 78689 87307 88662 85942 84308 98292 83422 94789 98612 85240 89032 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143340000 13865 1724 13107 26553 21329 21329 1 9606 Homo sapiens 0.04533034717474038 ISMSEVDLNVAAPK Unmodified 1472.7545 0.75447993 3815 Q09666;B4DTV0 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 7 0 1 59.353 59.402 3 0.0014145 17566 20230619_1887_Aki_TMTPro18x_K_F7 73.877 57.986 86078 65712 82079 76278 74237 79045 91344 88687 98719 89803 85684 86515 109560 86934 98763 114380 101880 109270 79530 60269 83559 76255 78170 79963 91341 89966 99644 90613 89594 88052 110510 91144 100880 114160 97498 103810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53080000 13866 3815 13108 26554 21330;21331 21330 2 9606 Homo sapiens 0.037012865434007836 ISNAQLQTELVEILK Unmodified 1697.9564 0.95635086 4313 Q93034;L0L6C1 CUL5 Cullin-5 yes no 0 0 0 7.5 0.5 1 1 64.574 64.599 3 7.0893E-14 19790 20230619_1888_Aki_TMTPro18x_K_F8 170.49 131.22 35154 27911 32738 37758 31843 40810 38001 39428 39764 38114 40539 45477 47350 43647 39484 47885 46545 62055 32481 25635 33483 37350 33357 40980 38023 40343 40443 38818 41887 45772 47764 45314 40729 48814 44573 58733 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 226930000 13867 4313 13109 26555;26556 21332 21332 1 9606 Homo sapiens 0.135290935005969 ISNDNPEEHVLK Unmodified 1393.6838 0.68375782 1600 Q6DHZ8;B2RBM8;A0A669KBJ7;Q9H2P0;A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein yes no 0 0 0 3 0 1 43.244 43.311 3 0.00069207 11047 20230619_1882_Aki_TMTPro18x_K_F3 94.688 80.782 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13868 1600 13110 26557 21333 21333 1 9606 Homo sapiens 0.00266329550095179 ISNITCDSFK Unmodified 1183.5543 0.55432356 42 A0A024QZK4;Q96FC7;Q96FC7-2 PHYHIPL Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 0 7.67 0.471 1 2 53.026 53.099 2;3 7.0025E-06 14984 20230619_1887_Aki_TMTPro18x_K_F7 135.8 97.045 379520 324260 364860 282430 173690 208280 318540 307400 345250 208370 199420 167290 190650 152380 230970 231090 235670 159210 350920 296580 368480 288350 199580 218770 313740 304650 343810 214770 211000 171490 196810 161810 234390 226960 224910 152260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 199070000 13869 42 13111 26558;26559;26560 21334;21335;21336 21334 3 9606 Homo sapiens -0.030111433335605398 ISNPWQSPSGTLPALR Unmodified 1722.9053 0.90531834 3854 Q13505-3;Q13505;Q13505-2 MTX1 Metaxin-1 yes no 0 0 0 5 0 1 59.83 59.882 3 4.8511E-11 17834 20230619_1885_Aki_TMTPro18x_K_F5 151.38 131.64 22723 19198 24284 24981 28613 33954 29011 27675 33492 31417 29935 30443 30373 26860 33517 33787 28997 34397 21027 17621 24614 24863 29407 33499 29362 28802 33732 31532 30916 30828 31137 28190 33782 33875 27826 32644 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58848000 13870 3854 13112 26561 21337 21337 1 9606 Homo sapiens 0.07278189246426336 ISNQFDWALMR Oxidation (M) 1395.6605 0.66051996 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 1 0 1.5 0.5 1 1 59.501 59.507 2 0.062236 18463 20230619_1881_Aki_TMTPro18x_K_F2 58.699 42.561 111740 88117 95411 102050 104380 114940 114280 109440 127890 90002 77648 83048 82315 75400 97124 96410 85938 88269 103180 80806 98458 102100 108020 115140 115020 111680 127440 91864 82329 84378 84622 79112 97883 96099 82350 83916 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 165480000 13871 1723 13113 26562;26563 21338;21339 21339 1128 2 9606 Homo sapiens -0.02148387768261273 ISNQVDLSNVCAQYR Unmodified 1765.8417 0.8417318 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 8 0 1 51.849 51.926 2 1.4770000000000001E-33 14388 20230619_1888_Aki_TMTPro18x_K_F8 264.72 237.94 28884 24497 21278 31824 25289 31597 28860 30210 28516 28324 24603 22424 31465 27318 25383 35090 30112 28158 26656 22484 22377 31513 26088 31923 28878 30910 28935 28553 25713 23229 31618 28422 26232 34722 28752 26825 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91094000 13872 81 13114 26564 21340 21340 1 9606 Homo sapiens -0.010555392529795427 ISNYGWDQSDK Unmodified 1311.5731 0.57314474 552 Q6NVY0;A0A024R904;Q9HB71;Q9HB71-3 CACYBP Calcyclin-binding protein yes no 0 0 0 5 0.816 2 2 2 51.298 51.358 2;3 2.0523E-08 14486 20230619_1886_Aki_TMTPro18x_K_F6 193.96 154.66 364750 307890 365820 358050 335990 430690 370660 347830 407390 513100 463990 422890 536550 403400 422210 538610 485170 429110 337350 282290 371080 358470 352770 428050 372990 365460 415860 506900 476190 432860 539500 424080 435440 532640 463210 408930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2540200000 13873 552 13115 26565;26566;26567;26568;26569;26570 21341;21342 21342 2 9606 Homo sapiens -0.07017890438146424 ISPTFADAYSNMGNTLK Oxidation (M) 1844.8615 0.86146419 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2;O15294-4 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 1 0 1 0 1 56.685 56.685 3 0.0087256 17144 20230619_1880_Aki_TMTPro18x_K_F1 60.918 50.722 23815 19705 19607 20519 22114 23802 18924 17685 31206 25928 29207 31947 25058 26879 28928 33825 27057 40513 21991 18049 20304 20703 22719 23694 19644 18720 30997 25968 29900 31985 25927 28242 29279 34234 25999 38359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99588000 13874 1842 13116 26571 21343 21343 1177 1 9606 Homo sapiens -0.027172080329137316 ISQAVVAQVTGISQSR Unmodified 1642.9002 0.90023296 2817 H0YLF2;E5RGZ2;H0YKJ1;D3DSU2;Q6NT76-4;Q6NT76-2;Q6NT76-3;Q6NT76;Q6NT76-5 HMBOX1 Homeobox-containing protein 1 yes no 0 0 0 5 0 1 58.762 58.818 3 5.0885E-26 17422 20230619_1885_Aki_TMTPro18x_K_F5 187.78 160.99 83805 60095 80363 80799 69250 85353 82703 76475 103250 83719 79307 79838 78984 76639 94111 95542 84833 93006 77406 55214 81765 79948 73280 85728 83235 78965 103020 84166 82527 81139 81412 80121 94934 95564 81314 88334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68254000 13875 2817 13117 26572 21344 21344 1 9606 Homo sapiens 0.1044988538378675 ISQDLALIAR Unmodified 1098.6397 0.63970816 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B3KME6;Q6AZE1;H0Y4T4;E7EMW0;E7EWM2;Q96L14;E5RG47;E5RGW7 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 0 0 0 7.5 0.5 1 1 58.23 58.28 2 0.0020615 17062 20230619_1888_Aki_TMTPro18x_K_F8 97.597 72.965 154640 132270 140780 153230 137770 168580 153180 153570 172550 181360 169330 176160 183870 164030 186950 200750 186160 215850 142930 121260 144210 153240 143940 168950 154190 158670 174670 181650 174620 178650 187390 171560 190100 201940 178330 204750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167050000 13876 1960 13118 26573;26574 21345 21345 1 9606 Homo sapiens 0.09433389914420331 ISQEIGNLMK Unmodified 1131.5958 0.59579444 2554 B4DNM8;Q32P28-4;Q32P28;Q32P28-3;H7C2W6 LEPRE1 Prolyl 3-hydroxylase 1 yes no 0 0 0 8 0 1 59.517 59.559 3 0.0035311 17631 20230619_1888_Aki_TMTPro18x_K_F8 62.466 41.094 16349 17006 17504 12788 16469 20922 16743 16028 23723 16563 17489 17406 19362 16505 18986 21586 21220 20003 15152 15529 17643 13394 17228 20438 17082 16721 23504 16760 18319 17614 19690 17321 19450 21515 20273 19020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13073000 13877 2554 13119 26575 21346 21346 1 9606 Homo sapiens 0.03526037425785944 ISQMPVILTPLHFDRDPLQK Oxidation (M) 2363.2671 0.26713708 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 1 1 3 0 1 59.149 59.178 4 5.9758E-11 18067 20230619_1882_Aki_TMTPro18x_K_F3 138.03 119.27 123400 107630 112620 135260 127550 121650 130000 129780 133980 142480 152260 134060 133240 130250 129350 171230 135500 145880 114070 98746 115630 134140 131220 124300 131090 132400 137040 143040 154410 136490 136520 136540 132190 169880 129650 138790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33729000 13878 1182 13120 26576 21347;21348 21348 726 2 9606 Homo sapiens 0.14003420094149988 ISQSNYIPTQQDVLR Unmodified 1760.9057 0.90571227 3415 P08754 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 0 0 0 7.5 0.5 1 1 52.448 52.521 3 6.1285E-14 14607 20230619_1888_Aki_TMTPro18x_K_F8 173.71 156.78 185630 165570 173940 201700 167010 192750 187990 181760 224560 192700 186660 197070 245240 181630 197610 247720 229370 204010 171660 151840 177740 200590 174730 195340 189460 186830 225190 194380 195910 199430 246040 191420 203800 245290 218970 194330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 987430000 13879 3415 13121 26577;26578 21349 21349 1 9606 Homo sapiens 0.055695641755846736 ISRDELLQVLR Unmodified 1340.7776 0.77759863 585 A0A024R9M9;Q99653 CHP;CHP1 Calcineurin B homologous protein 1 yes no 0 0 1 1 0 1 55.769 55.769 3 0.00010782 16798 20230619_1880_Aki_TMTPro18x_K_F1 122.18 77.217 63041 51788 64802 63887 47700 62034 59032 70255 75850 73934 67289 70247 76647 63162 63109 86727 78028 80256 58307 47514 65423 63527 51300 63035 59441 71270 76001 74400 69857 71259 77293 66639 65367 86337 74528 76288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56614000 13880 585 13122 26579 21350 21350 1 9606 Homo sapiens 0.12084093443036181 ISRPGDSDDSR Unmodified 1203.548 0.54799262 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;M0R1W6;B4DPK8;B4DVF8;M0QYL7;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 0 1 2.5 0.5 1 1 28.745 28.837 3 6.6818E-06 5248 20230619_1881_Aki_TMTPro18x_K_F2 145.09 118.64 29130 16476 31555 38434 49353 44242 40004 45972 41864 31949 49700 50339 45569 40768 45190 21084 49714 42222 26902 15277 32150 37037 49511 44315 40953 46462 42808 33600 50452 49911 46626 41338 46067 22777 47471 39906 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1460499999.9999998 13881 1455;1520 13123 26580;26581 21351;21352 21351 2 9606 Homo sapiens -0.04563945240715839 ISSDLDGHPVPK Unmodified 1263.6459 0.64591575 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;E9PFF2;A0A0S2Z5C0;F8W888 HEL107;TKT Transketolase yes no 0 0 0 5.33 1.25 1 1 1 44.068 44.129 3 0.0012382 11287 20230619_1885_Aki_TMTPro18x_K_F5 85.813 53.75 164300 118720 153150 166100 185100 180050 201980 211950 265100 212140 234330 240180 201530 205160 185010 219210 245170 247640 151730 109120 157060 164030 190110 181750 204570 214270 265050 215300 240430 241340 206250 213400 191940 221560 234010 234900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 543660000 13882 3523 13124 26582;26583;26584 21353;21354 21353 2 9606 Homo sapiens 0.02463863355274043 ISSIQSIVPALEIANAHR Unmodified 1918.0636 0.063609895 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;B7Z532;Q53QD5 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 3.5 0.5 1 1 62.138 62.155 3 2.2989000000000002E-30 19235 20230619_1883_Aki_TMTPro18x_K_F4 227.67 207.58 437840 349590 365580 387090 330050 428390 385370 410930 475810 335930 328510 334220 338800 308210 372360 467230 438650 452410 404250 320440 377030 388520 347970 429560 388210 418960 473320 343740 344600 338890 347400 327100 382250 465780 419150 429810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 505670000 13883 272 13125 26585;26586 21355;21356;21357 21357 3 9606 Homo sapiens 0.14130063434845397 ISSLLEEQFQQGK Unmodified 1505.7726 0.77257283 3707 Q5JR94;P62241;Q5JR95;Q9BS10 RPS8 40S ribosomal protein S8 yes no 0 0 0 7 0.707 1 2 1 62.079 62.117 2;3 2.8947E-11 18665 20230619_1888_Aki_TMTPro18x_K_F8 186.36 143.55 1927200 1649700 1918400 2041500 1711600 2010000 1952400 1948700 2100600 2175500 1823300 1889800 2552700 1767500 1764000 2636000 2440700 2404700 1782400 1513400 1947200 2029200 1801600 2033400 1959800 2001400 2122700 2177700 1915600 1928200 2542800 1875200 1849700 2619100 2328400 2286600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9265400000 13884 3707 13126 26587;26588;26589;26590 21358;21359 21359 2 9606 Homo sapiens 0.03991744789755103 ISSPTETER Unmodified 1018.4931 0.49310351 3537 P31949;V9HWH9;B2R5H0 S100A11;HEL-S-43 Protein S100-A11;Protein S100-A11, N-terminally processed;Protein S100 yes no 0 0 0 2 0 1 34.649 34.705 2 3.369E-08 7513 20230619_1881_Aki_TMTPro18x_K_F2 205.36 151.15 27634 13462 34252 62888 171340 204620 183400 199080 199770 155480 133490 187550 251520 165650 143650 115920 198460 196160 25538 12728 36626 61124 167510 195770 184430 202300 200020 160500 145530 187880 247550 169310 150800 121890 189340 185470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265880000 13885 3537 13127 26591 21360 21360 1 9606 Homo sapiens -0.015403320413270194 ISSPTGSK Unmodified 775.40758 0.40758296 4405 Q99623;F5GY37;Q99623-2;J3KPX7;F5GWA7;B4DW05;A0A976LZI3;A0A7I2V5F0 PHB2 Prohibitin-2 yes no 0 0 0 8 0 1 38.618 38.605 2 0.0017839 8896 20230619_1888_Aki_TMTPro18x_K_F8 151.04 45.835 38465 12481 46195 49081 75198 79318 49915 73927 61135 37778 68722 99474 55650 68319 59663 22556 84853 83728 35493 11768 46725 46868 75106 77694 52212 74865 61845 41994 69794 96954 57564 69025 61773 26964 80935 78881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31156000 13886 4405 13128 26592 21361 21361 1 9606 Homo sapiens 0.01089547563663018 ISSVSEVMK Unmodified 978.50558 0.50558245 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463;Q3B7X4;B4E2B5;Q05DN3;D6RAW4 IMMT MICOS complex subunit MIC60 yes no 0 0 0 7.33 0.471 2 1 51.68 51.756 2 5.4224E-16 14360 20230619_1887_Aki_TMTPro18x_K_F7 193.41 149.28 129080 111850 123150 130550 158680 185800 174940 166200 209970 71562 75542 51722 70008 52997 95259 88677 86517 58393 119360 102540 126220 131040 162580 183180 176350 168600 206090 77076 83497 53693 72856 56513 95894 86868 82669 55886 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228850000 13887 3954 13129 26593;26594;26595 21362;21363 21362 2 9606 Homo sapiens 0.015469880973682848 ISTEDDGLVR Unmodified 1103.5459 0.54586736 4239 Q8N806;B2RDC9;E9PCJ7;Q05DA8;G3V336 UBR7 Putative E3 ubiquitin-protein ligase UBR7 yes no 0 0 0 1.5 0.5 1 1 44.334 44.376 2 4.7348E-26 11857 20230619_1881_Aki_TMTPro18x_K_F2 267.52 229.2 223560 176220 188420 212040 216320 253980 235680 235060 283100 241790 273730 238200 269950 219610 210270 296150 280090 234710 206400 161660 194920 211730 223270 253180 237950 241600 285190 244000 280790 241640 272790 231150 219180 292700 267000 223740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174720000 13888 4239 13130 26596;26597 21364;21365 21365 2 9606 Homo sapiens -0.0017637397852467984 ISTILFGAAYTCLEAATGR Unmodified 2014.0194 0.019361819 4514 Q9H4A4;A6NKB8;Q7RU04;C9JMZ3 RNPEP Aminopeptidase B yes no 0 0 0 5 0 1 66.406 66.449 3 1.9263E-10 20763 20230619_1885_Aki_TMTPro18x_K_F5 133.93 122.02 4924.7 3080.2 2477.6 2437 2849.7 4724.4 4242 3270.5 3595.6 3549.1 4214.2 3106.1 4356.3 2389.7 5015.4 4373.6 4589.1 4180.5 4528.3 2819.1 2728.6 2546.4 2984.6 4568.6 4172.8 3449.1 3722.4 3559.5 4296.2 3155.9 4463.1 2600.2 5061.1 4353.6 4392.1 3974.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6497500 13889 4514 13131 26598 21366 21366 1 9606 Homo sapiens 0.05291291226353678 ISTLTIEEGNLDIQRPK Unmodified 1926.0422 0.042205751 3825 Q561W4;Q12972;A0A0A0MT09;Q38J66;Q12972-2 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay yes no 0 0 1 7 0 1 55.629 55.69 3 4.0596E-24 16053 20230619_1887_Aki_TMTPro18x_K_F7 215.23 201.14 40444 31210 40189 46949 34879 54362 47312 42635 57481 49769 52125 52741 53100 46699 46620 61287 52634 69059 37382 28703 40833 46178 37121 54079 47284 44580 57736 50039 53773 53221 53874 49150 47942 61735 50416 65450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3560000 13890 3825 13132 26599 21367 21367 1 9606 Homo sapiens 0.11622633615456834 ISTQLDFASK Unmodified 1108.5764 0.57643921 3440 P12270;P12270-2 TPR Nucleoprotein TPR yes no 0 0 0 8 0 1 55.054 55.121 2 1.2328E-06 15764 20230619_1888_Aki_TMTPro18x_K_F8 134.75 94.705 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13891 3440 13133 26600 21368 21368 1 9606 Homo sapiens 0.026494044064975242 ISTSLNPGNPVNNQIFLQEYVANLLK Unmodified 2885.5287 0.52870774 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V488;B7ZB16;B4DR01;B3KWD0 XPO1 Exportin-1 yes no 0 0 0 5 0 1 66.463 66.506 3 1.3969E-05 20791 20230619_1885_Aki_TMTPro18x_K_F5 86.551 72.821 2428.8 1111 2085.7 2234.6 1240.5 1581.9 1390.3 2629 1180.8 3039.8 2783.7 3479.9 3300 2711.7 1669.4 5185.2 4104.2 7559.1 2237 1028.8 2134.8 2155.3 1361.5 1670.7 1393.5 2621.2 1287 3056.9 2805.6 3489.1 3275.9 2958.2 1881.6 5289.3 3927.3 7141.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2357500 13892 3228 13134 26601 21369 21369 1 9606 Homo sapiens 0.16136453204126155 ISTVVSSK Unmodified 819.47018 0.47018322 3560 P37108;H0YLA2 SRP14 Signal recognition particle 14 kDa protein yes no 0 0 0 1.5 0.5 1 1 46.269 46.308 2 0.0023351 12701 20230619_1881_Aki_TMTPro18x_K_F2 138.54 46.639 253560 127690 263780 289220 450510 509780 332270 436050 429190 269460 390660 485650 410830 414660 398040 220230 542380 523660 233980 118410 270080 281280 450240 496570 345030 445690 429710 288110 404190 480280 418650 419820 411890 242050 517420 494230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 329330000 13893 3560 13135 26602;26603 21370 21370 1 9606 Homo sapiens 0.0532269363186515 ISVATGALEAAQGSK Unmodified 1401.7464 0.74635808 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 4.5 3.5 1 1 56.035 56.035 3 5.7781E-08 16840 20230619_1880_Aki_TMTPro18x_K_F1 136.83 116.99 72497 57912 74889 68370 62322 80893 80070 74539 85778 80097 80186 69155 81386 73701 80848 70986 72975 77352 67044 53115 75667 68380 66286 80679 79889 76738 86824 80351 82529 70872 83014 75740 81732 71779 69928 73386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 298110000 13894 1331 13136 26604;26605 21371;21372 21371 2 9606 Homo sapiens 0.06155475618243145 ISVFRPGLR Unmodified 1043.624 0.62399852 1034 A0A0G2JLD8;E7EUY5;Q567R6;A4D1U3;B7Z268;Q04837;C9K0U8 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial yes no 0 0 1 7.5 0.5 1 1 45.738 45.801 3 0.00014151 11782 20230619_1888_Aki_TMTPro18x_K_F8 138.26 102.77 89252 61335 70232 69696 77810 304440 86350 70649 600770 114610 85891 142790 119100 132960 90918 208500 171920 139200 82301 56269 73318 72510 83433 284040 101750 89396 560690 115870 113890 143300 119790 141170 98061 204080 163480 133070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164530000 13895 1034 13137 26606;26607 21373 21373 1 9606 Homo sapiens 0.10393148188040868 ISVNNVLPVFDNLMQQK Oxidation (M) 1974.0244 0.024447197 1270 F8W787;A0A1B0GW44;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;V9HWI3;C9JH19;P07339;A0A1B0GVP3;A0A1B0GU92;A0A1B0GU03;H7C469;F8WD96 CTSD;HEL-S-130P Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 0 1 0 3 0 1 63.515 63.546 3 1.3165E-14 19935 20230619_1882_Aki_TMTPro18x_K_F3 168.41 140.13 27762 24535 28986 37358 43341 42841 45710 52207 49480 34913 40803 39242 39634 36440 42174 47974 36904 48802 25693 22557 29615 36729 43897 43105 46058 52197 49796 36351 42225 39600 40625 38278 42589 48050 35443 46300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31932000 13896 1270 13138 26608 21374 21374 803 1 9606 Homo sapiens 0.07639595088949136 ISVNNVLPVFDNLMQQK Unmodified 1958.0295 0.029532575 1270 F8W787;A0A1B0GW44;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;V9HWI3;C9JH19;P07339;A0A1B0GVP3;A0A1B0GU92;A0A1B0GU03;H7C469;F8WD96 CTSD;HEL-S-130P Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 0 0 0 3.5 0.5 1 1 65.136 65.158 3 2.1192E-23 20462 20230619_1883_Aki_TMTPro18x_K_F4 194.58 164.45 23918 18368 22894 32564 26407 34638 43075 39778 35181 31818 33927 34703 34097 31894 34330 39158 32802 38301 22100 16930 23479 31715 27608 34942 42191 40078 36214 32664 34897 35024 34823 33360 34851 39173 31437 36367 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63892000 13897 1270 13138 26609;26610 21375 21375 1 9606 Homo sapiens 0.08883898951580704 ISVPIDLQK Unmodified 1011.5964 0.59644637 1575 B2RBY4;A0A5F9ZHB6;P49642;Q53F98;H0YIP2;A0A3B3ITS8 PRIM1 DNA primase;DNA primase small subunit yes no 0 0 0 1 0 1 58.319 58.319 2 0.00022576 17816 20230619_1880_Aki_TMTPro18x_K_F1 118.33 59.519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13898 1575 13139 26611 21376 21376 1 9606 Homo sapiens 0.09111200137135711 ISVYSIMGGSTDGLR Unmodified 1554.7712 0.77119262 762 O94979-9;D6REX3;O94979-6;O94979-3;O94979-4;O94979-10;O94979-2;O94979;O94979-8;A0A1S5UZ19;A1LU61;A0A024RDH6;D6RHZ5;O94979-7;H7BXG7;O94979-5 SEC31A;SEC31L1 Protein transport protein Sec31A yes no 0 0 0 2 0 1 61.927 61.937 2 1.3797E-13 19457 20230619_1881_Aki_TMTPro18x_K_F2 212.9 182.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13899 762 13140 26612 21377 21377 1 9606 Homo sapiens 0.01599787429358912 ISVYYNEASSHK Unmodified 1396.6623 0.6622941 983 Q9BV28;A0A0B4J269;Q13509;Q53G92;G3V5W4;G3V2R8;G3V3R4;G3V2N6 TUBB3 Tubulin beta-3 chain yes no 0 0 0 7.5 0.5 1 1 46.102 46.165 3 2.2329E-10 11936 20230619_1888_Aki_TMTPro18x_K_F8 189.8 158.57 204040 188800 205100 205790 186180 196140 180270 183060 178130 210510 222290 229140 215410 176000 182060 205630 224740 240650 188830 172950 207920 206400 194620 198900 182230 188720 183520 211730 225710 229890 218440 184960 188210 208050 214730 228140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 434910000 13900 983 13141 26613;26614 21378;21379 21379 2 9606 Homo sapiens -0.020170554786318462 ISVYYNEATGGK Unmodified 1300.6299 0.62993134 1486 P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;B4DMU8;B4DMJ5 TUBB Tubulin beta chain yes no 0 0 0 4.8 2.79 1 1 1 1 1 53.332 53.382 3 5.3719E-07 15342 20230619_1886_Aki_TMTPro18x_K_F6 150.06 131.48 779760 642450 752100 787100 781130 839660 827040 791480 884240 1009500 1055300 1097900 1143300 988730 1015300 1154300 1156600 1152600 720840 589380 766920 783750 810130 844160 833240 817910 905110 1011000 1078900 1106800 1158200 1032100 1043300 1156900 1105200 1094800 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 36949000000 13901 1486 13142 26615;26616;26617;26618;26619 21380;21381;21382;21383 21381 4 9606 Homo sapiens -0.008358428816563901 ISWEEYK Unmodified 953.44945 0.44944778 3928 V9HW95;Q15293;Q15293-2 HEL-S-84;RCN1 Reticulocalbin-1 yes no 0 0 0 5.5 0.5 1 1 54.544 54.616 2 0.0060876 15837 20230619_1886_Aki_TMTPro18x_K_F6 143.85 99.504 78948 68602 78964 103570 162300 207240 156380 155920 167870 124520 133720 144540 145790 124060 139260 162580 152480 154820 73030 63068 81705 102930 162030 200340 158230 161890 168910 128250 139440 145200 148130 130650 142580 162260 145780 147130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 338020000 13902 3928 13143 26620;26621 21384 21384 1 9606 Homo sapiens -0.02913896747804756 ISWLEGQPQDAVGR Unmodified 1554.7791 0.77905519 4604 Q9NVM6 DNAJC17 DnaJ homolog subfamily C member 17 yes yes 0 0 0 6 0 1 58.157 58.226 2 0.0012323 17376 20230619_1886_Aki_TMTPro18x_K_F6 97.214 66.644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13903 4604 13144 26622 21385 21385 1 9606 Homo sapiens 0.023856827411236736 ISWVGEAVK Unmodified 987.53893 0.53893149 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;A0A7I2V311;A0A7I2V5F6 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 5.67 3.3 1 2 57.056 57.09 2 0.00017421 17291 20230619_1880_Aki_TMTPro18x_K_F1 133.57 79.165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13904 442 13145 26623;26624;26625 21386;21387;21388 21386 3 9606 Homo sapiens 0.0446635793156247 ISYEWAVR Unmodified 1022.5185 0.5185304 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67;Q7Z3K3-3;B4DSK8 POGZ Pogo transposable element with ZNF domain yes no 0 0 0 8 0 1 53.46 53.533 2 0.012153 15066 20230619_1888_Aki_TMTPro18x_K_F8 90.37 65.519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13905 4164 13146 26626 21389 21389 1 9606 Homo sapiens 0.00817187271752573 ISYVQDENRDPIR Unmodified 1603.7954 0.79543354 2374 B3KPD3;Q9NQS7-2;Q9NQS7;E9PM67 INCENP Inner centromere protein yes no 0 0 1 4 0 1 42.632 42.676 3 0.0020121 10712 20230619_1883_Aki_TMTPro18x_K_F4 78.985 55.973 41773 37571 44299 45010 49983 54177 45173 48972 51015 48068 50755 58589 62293 50420 47306 50391 53383 49356 38669 34449 44874 44968 51330 53975 46032 50357 51652 48951 52633 58690 62479 52277 48716 50586 50990 46904 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25533000 13906 2374 13147 26627 21390 21390 1 9606 Homo sapiens 0.017687639072391903 ITAAVIEHLER Unmodified 1250.6983 0.69828568 3049 O43716;H0YIV9;F8VRU3 GATC Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial yes no 0 0 0 6 0 1 53.567 53.644 3 0.00038659 15465 20230619_1886_Aki_TMTPro18x_K_F6 96.82 42.754 84721 54157 63407 57916 75263 70899 83818 82281 92667 90859 77666 89468 116320 74776 81417 105510 127080 111520 78069 49673 66321 58414 77427 71020 84263 83467 93390 91305 82141 90373 115730 79375 86041 105780 121040 105910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 469240000 13907 3049 13148 26628 21391 21391 1 9606 Homo sapiens 0.08296446488884612 ITADGAHFELR Unmodified 1228.62 0.62003536 3142 J3QK89;Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes no 0 0 0 4.5 0.5 1 1 46.22 46.28 3 2.0672E-24 12174 20230619_1885_Aki_TMTPro18x_K_F5 254.19 188.97 164690 125450 157420 178090 163370 198810 179430 184860 203690 197660 200630 203800 215100 181850 167250 197400 232240 229870 152170 115310 160760 175720 169840 199040 180770 190150 206050 199280 206590 205830 216860 189200 174660 199850 221560 217990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342000000 13908 3142 13149 26629;26630 21392;21393 21393 2 9606 Homo sapiens 0.014870139036474939 ITAEEMYDIFGK Oxidation (M) 1431.6592 0.65918256 4720 Q9Y3B4 SF3B6 Splicing factor 3B subunit 6 yes yes 0 1 0 5 0 1 61.12 61.17 3 0.011255 18400 20230619_1885_Aki_TMTPro18x_K_F5 63.691 47.935 60390 50157 66738 70549 65275 74214 61547 60950 89693 66637 62172 61879 66588 58941 77128 69124 68353 66927 55895 46080 67259 69589 67872 74446 63148 63356 88643 66972 65301 62937 68343 61429 77713 69209 65474 63596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55435000 13909 4720 13150 26631 21394 21394 2879 1 9606 Homo sapiens -0.03938066647674532 ITAEEMYDIFGK Unmodified 1415.6643 0.66426794 4720 Q9Y3B4 SF3B6 Splicing factor 3B subunit 6 yes yes 0 0 0 5 0.816 1 1 1 63.877 63.911 3 4.5679E-07 19890 20230619_1886_Aki_TMTPro18x_K_F6 129.84 114.3 135700 99193 133310 134320 125720 148410 125410 141360 142520 169400 162350 160000 198800 178190 155020 188350 181140 201000 125370 91137 135500 132940 131290 148800 127120 145590 145220 169400 167180 163500 199720 183750 160040 189730 173200 190710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 595330000 13910 4720 13150 26632;26633;26634 21395 21395 1 9606 Homo sapiens -0.02693762785065701 ITAFHNAHDLSK Unmodified 1352.6837 0.68369824 1775 A0A8I5KVF8;Q6MZM4;Q6MZP3;Q8N3U4;Q8N3U4-2;B2R8Y6;Q6AI02;Q6MZM3;B4DQ46 DKFZp686P16143;DKFZp686I05169;STAG2;DKFZp686P168;DKFZp686C21148 Cohesin subunit SA-2 yes no 0 0 0 8 0 1 41.328 41.325 4 1.7156E-09 10030 20230619_1888_Aki_TMTPro18x_K_F8 151.54 121.1 67090 58420 70807 70799 73729 71472 82340 67771 71334 73867 80083 59843 68044 60611 78998 57624 65598 59143 62089 53577 71657 70506 76445 72177 82173 69702 73647 73903 81129 61452 70338 62348 79277 58124 62849 56182 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50785000 13911 1775 13151 26635 21396 21396 1 9606 Homo sapiens 0.021463743407593938 ITAHLVHELR Unmodified 1187.6775 0.67749065 2292 B2RB23;P42765;A0A0B4J2A4;B3KNP8;K7EME0 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes no 0 0 0 8 0 1 40.466 40.459 3 3.0468E-07 9659 20230619_1888_Aki_TMTPro18x_K_F8 178.54 143.32 106040 76726 93160 117170 135060 140660 147500 124120 150020 98903 122890 114520 111630 87387 120470 111660 126980 121850 97879 70597 96505 115210 137240 140040 147940 127360 151400 101880 126860 114710 114670 92361 122650 112420 121400 115650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130970000 13912 2292 13152 26636 21397 21397 1 9606 Homo sapiens 0.09115900899882945 ITALAPSTMK Unmodified 1031.5685 0.56851706 4827 V9HVZ7 HEL-176 yes yes 0 0 0 2.67 0.471 1 2 53.187 53.237 2;3 4.0118E-05 15604 20230619_1882_Aki_TMTPro18x_K_F3 172.59 113.68 299820 221440 292800 292250 267490 464430 349840 320500 169400 277720 281850 272980 307180 245520 336310 310840 317890 278350 277010 203390 297900 291420 282930 452710 342550 336210 187720 282630 285210 276560 313900 257650 340290 309610 304060 264870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 491590000 13913 4827 13153 26637;26638;26639 21398;21399;21400 21400 3 9606 Homo sapiens 0.05399553885399655 ITALAPSTMK Oxidation (M) 1047.5634 0.56343168 4827 V9HVZ7 HEL-176 yes yes 0 1 0 2 0 1 49.026 49.091 2 0.015363 14013 20230619_1881_Aki_TMTPro18x_K_F2 99.855 75.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13914 4827 13153 26640 21401 21401 2928 1 9606 Homo sapiens 0.04155250022790824 ITALDEFATK Unmodified 1107.5812 0.58119023 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 5.75 0.829 2 1 1 60.171 60.223 2;3 0.0002642 17887 20230619_1887_Aki_TMTPro18x_K_F7 114.97 51.893 68376 48906 55969 62933 55224 68406 65166 65873 75343 71768 75178 69867 76913 65714 76187 86310 77430 80746 63081 44914 57928 62466 57789 68675 65451 67626 76164 72171 77191 70927 78411 69007 77613 86061 74095 76740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 411660000 13915 1022;3868 13154 26641;26642;26643;26644 21402;21403 21403 2 9606 Homo sapiens 0.031702885492677524 ITCLCQVPQNAANR Unmodified 1643.7872 0.78719381 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PGB5 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 46.961 47.038 2;3 1.539E-08 12797 20230619_1882_Aki_TMTPro18x_K_F3 117.27 104.08 231070 259440 289670 283980 323730 340980 351470 297570 334670 324970 313790 296950 321270 251260 380840 292060 287250 306590 214610 237520 289890 285610 333880 339630 352140 307850 341170 326140 323370 301140 330210 263020 380570 293960 275880 290980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 278470000 13916 1637 13155 26645;26646 21404;21405 21405 2 9606 Homo sapiens -0.008948296053631566 ITDEEELNDYK Unmodified 1367.6093 0.60925548 4045 Q8IXG0;Q69YP1;Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 crn;DKFZp762M013;CRNKL1 Crooked neck-like protein 1 yes no 0 0 0 1.67 0.471 1 2 51.543 51.565 2;3 0.033554 14999 20230619_1880_Aki_TMTPro18x_K_F1 42.031 26.491 51425 45087 51162 52122 52369 62334 58842 59852 48843 68418 68392 70837 78341 60433 68773 80026 67468 70290 47570 41329 52027 52208 54473 62197 58679 61532 51201 68708 69713 71460 79124 63728 70094 79531 64585 66855 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65428000 13917 4045 13156 26647;26648;26649 21406;21407 21406 2 9606 Homo sapiens -0.05984478051937003 ITDHFMR Unmodified 918.43817 0.43817159 3816 Q0MQR4;Q86W56-3;Q86W56-2;Q86W56 PARG Poly(ADP-ribose) glycohydrolase yes no 0 0 0 8 0 1 40.908 40.9 3 0.017195 9871 20230619_1888_Aki_TMTPro18x_K_F8 81.32 51.904 19919 15744 16592 18884 16198 19265 19018 20434 20996 26324 26938 29683 31028 27156 21272 25820 30876 32391 18390 14442 17141 18821 16952 19478 19084 20948 21540 26379 27544 29874 31083 28032 22356 26325 29459 30690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5829200 13918 3816 13157 26650 21408 21408 1 9606 Homo sapiens -0.024309973229378556 ITDIIGKEEGIGPENLR Unmodified 1852.9894 0.9894419 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 1 6 0 1 58.767 58.833 3 0.00011151 17662 20230619_1886_Aki_TMTPro18x_K_F6 137.27 117.43 53887 47696 52910 58657 37328 32871 41445 41463 40854 57244 60841 57406 63852 52666 56420 59408 51097 48866 49846 43746 53604 58013 40045 35438 41596 42235 42516 56971 61589 58112 64681 54829 57225 59007 48925 46533 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29729000 13919 3833 13158 26651 21409 21409 1 9606 Homo sapiens 0.09706675552661181 ITDLYTDLR Unmodified 1108.5764 0.57643921 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 5 0.816 1 1 1 58.172 58.214 2 0.0054083 17192 20230619_1885_Aki_TMTPro18x_K_F5 93.467 63.282 187700 141370 173240 206350 157740 231040 216660 199540 260000 234330 229340 273010 282690 255000 283430 283040 304090 356840 173360 129980 177260 203240 167190 230810 216300 207050 261170 236250 239460 274670 287010 265160 289340 288090 291120 337950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 410880000 13920 2337;3778;3779 13159 26652;26653;26654 21410 21410 1 9606 Homo sapiens 0.026494044064975242 ITDNMFCAGYKPGEGK Unmodified 1786.8018 0.80184082 2771 CON__P00735 yes yes 0 0 1 1.5 0.5 1 1 53.633 53.647 3 1.6504E-05 15823 20230619_1880_Aki_TMTPro18x_K_F1 99.021 90.23 + 46008 39676 47432 73176 73560 112080 70695 69826 147960 393930 685700 1325500 178390 463350 212450 437570 557140 951060 42568 36575 48664 71503 74666 109350 74164 83398 167610 407830 659980 1270800 202050 503380 235940 468130 532470 896430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 271170000 13921 2771 13160 26655;26656 21411;21412 21411 2 9606 Homo sapiens -0.060088022479703795 ITDNMFCAGYKPGEGK Oxidation (M) 1802.7968 0.79675545 2771 CON__P00735 yes yes 0 1 1 7.5 0.5 1 1 48.768 48.844 3 0.024408 12980 20230619_1888_Aki_TMTPro18x_K_F8 59.585 50.215 + 29428 34871 35516 46169 124040 136480 85147 93022 149750 283260 553780 856230 212910 406000 469280 297170 375280 621340 27334 31979 36994 46798 120900 130170 90301 103280 164660 292900 536530 826260 241500 426750 466680 319140 361680 585820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 293980000 13922 2771 13160 26657;26658 21413;21414 21414 1649 2 9606 Homo sapiens -0.07253106110601948 ITDSAGHILYSK Unmodified 1303.6772 0.67721588 398 A0A024R6I3;Q53GF9;P49755;G3V2K7;B4DL12 TMED10 Transmembrane emp24 domain-containing protein 10 yes no 0 0 0 8 0 1 48.749 48.815 3 1.4693E-05 13030 20230619_1888_Aki_TMTPro18x_K_F8 130.1 98.459 208480 148660 180550 212500 216920 254030 224590 237820 234970 237720 235850 242620 244540 204460 199930 236170 238740 277780 192410 136680 186500 209790 222810 253230 226360 244010 238930 240370 242330 244740 247180 213940 206440 239030 228320 263250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167030000 13923 398 13161 26659 21415 21415 1 9606 Homo sapiens 0.03752436389368086 ITEEEFEK Unmodified 1023.4761 0.47605646 690 F5H5U2;A0A384N652;A0A024RBS0;Q8NHQ9;Q8NHQ9-2 DDX55 ATP-dependent RNA helicase DDX55 yes no 0 0 0 1 0 1 49.952 49.952 2 0.012838 14327 20230619_1880_Aki_TMTPro18x_K_F1 97.635 66.977 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13924 690 13162 26660 21416 21416 1 9606 Homo sapiens -0.034742526471404744 ITEFCHR Unmodified 961.44399 0.44398525 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;B3KTQ9 P4HB Protein disulfide-isomerase yes no 0 0 0 6.5 1.12 1 1 1 1 37.593 37.647 3 9.6527E-05 8577 20230619_1886_Aki_TMTPro18x_K_F6 174.21 141.74 289240 215700 243120 243710 314100 295680 323590 325010 392730 298740 344230 356910 341480 268460 330650 341960 380290 328460 266950 197800 251840 244650 320690 295890 327750 329230 393920 305180 355450 356740 348010 283740 339190 341700 363020 312300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1477699999.9999998 13925 537 13163 26661;26662;26663;26664 21417;21418;21419 21418 3 9606 Homo sapiens -0.0382789881126655 ITELKEEIEVK Unmodified 1329.7391 0.73914744 4575 Q9NQP4;E9PQY2;B2R548 PFDN4 Prefoldin subunit 4 yes no 0 0 1 5.5 0.5 1 1 58.163 58.225 3 0.0018706 17368 20230619_1886_Aki_TMTPro18x_K_F6 87.155 59.745 194750 178420 200370 200490 189700 179050 211860 201090 155650 245410 253290 191550 200470 152430 257780 162060 160290 116480 180250 163480 202870 200500 198040 183350 210760 205120 165950 243730 252700 195580 208670 159090 255200 160530 154000 111270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154780000 13926 4575 13164 26665;26666 21420 21420 1 9606 Homo sapiens 0.08746743017854897 ITELTDENVK Unmodified 1160.5925 0.5924832 3478 Q6FGR6;P19387;B7Z6D1;H3BRR2;B7Z377 POLR2C DNA-directed RNA polymerase II subunit RPB3 yes no 0 0 0 3 0 1 51.596 51.662 2 1.2659E-06 14879 20230619_1882_Aki_TMTPro18x_K_F3 150.61 83.987 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13927 3478 13165 26667 21421 21421 1 9606 Homo sapiens 0.01861065852745014 ITENIGCVMTGMTADSR Unmodified 1854.8274 0.82740365 1226 G3V295;A0A140VK44;G3V5Z7;P60900;P60900-2;G3V3I1 PSMA6 Proteasome subunit alpha type;Proteasome subunit alpha type-6 yes no 0 0 0 7.5 0.5 1 1 59.958 60 3 9.5369E-24 17804 20230619_1887_Aki_TMTPro18x_K_F7 156.86 147.93 24508 21647 26013 28971 26542 33970 27045 26448 54402 33067 32719 36006 36359 32747 32226 38438 31804 31894 22684 19872 26330 28706 27631 33784 28063 27723 52944 33220 34758 36300 36817 34165 32854 38157 30434 30362 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47515000 13928 1226 13166 26668;26669 21422 21422 1 9606 Homo sapiens -0.06581695787826902 ITESEEVVSR Unmodified 1147.5721 0.57208211 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;Q8N519;A0A6Q8PF80;A0A6Q8PGH0;A0A6Q8PF59;A0A6Q8PFM1;W5X314 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 1.5 0.5 1 1 41.219 41.257 2 1.4879E-09 10355 20230619_1881_Aki_TMTPro18x_K_F2 206.23 174.39 513740 339430 373440 536520 808980 802340 772210 783730 1049100 691700 741370 813280 808640 648210 720160 789110 816890 778040 473400 312580 398670 528570 804900 790530 788340 799110 1039900 708340 778470 814470 818930 681590 739550 789960 780390 739240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2631200000 13929 1428 13167 26670;26671 21423;21424 21424 2 9606 Homo sapiens 0.0041989519295384525 ITEYLCEPLRK Unmodified 1420.7384 0.73843593 1172;3819 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087WZQ6;A0A087WU93;K7ERB2;K7EN71;Q10567-4;Q10567-3;Q10567-2;Q10567;C9J1E7 AP2B1;DKFZp781K0743;AP1B1 AP-2 complex subunit beta;AP complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 1 1.5 0.5 1 1 54.509 54.521 3 0.00035609 16196 20230619_1880_Aki_TMTPro18x_K_F1 102.05 86.157 496230 435070 480570 477240 354320 451050 516580 490160 579950 655110 513700 466880 599710 499800 438840 746070 588360 583220 458940 398620 487660 478460 382890 459040 513450 502440 585220 647450 533460 483990 601830 527500 459040 735690 561460 555690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 984220000 13930 1172;3819 13168 26672;26673 21425 21425 1 9606 Homo sapiens 0.04489625097130556 ITEYQHEAR Unmodified 1145.5465 0.54653606 4605 Q9NVM9;F5H5W1;F5H457;Q9NVM9-2;F8VRX9 ASUN Protein asunder homolog yes no 0 0 0 3 0 1 32.944 33.016 3 0.00013953 6790 20230619_1882_Aki_TMTPro18x_K_F3 133.83 105.43 42795 23056 44039 48368 71542 61254 60153 61323 64856 47231 59194 53796 44490 44991 57415 35660 64811 53135 39497 21344 45056 46888 71680 60957 61442 62253 65517 48710 60346 54014 46548 46200 58436 37040 61858 50325 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30392000 13931 4605 13169 26674 21426 21426 1 9606 Homo sapiens -0.020415345388073547 ITFADFHR Unmodified 1005.5032 0.50321468 4253 Q8NF37;D3DTC2;A0A0G2JQ62;A0A0G2JRI7 LPCAT1;AYTL2 Lysophosphatidylcholine acyltransferase 1 yes no 0 0 0 4.5 3.5 1 1 48.54 48.574 3 2.9842E-07 13770 20230619_1880_Aki_TMTPro18x_K_F1 199.29 161.56 66195 54520 60007 61073 54590 66319 68165 64742 77622 45476 57665 55572 50887 46972 66048 57539 62495 59362 61164 49973 61408 61233 57565 66622 68221 65760 77602 47356 59830 55718 52907 49273 66651 57783 59807 56375 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52220000 13932 4253 13170 26675;26676 21427;21428 21427 2 9606 Homo sapiens 0.0006832047456555301 ITFDAFPGEPDK Unmodified 1335.6347 0.63468237 1746 A0A8C8MUD1;Q12904;Q12904-2;B4DNK3;A0A8C8KIA0 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 0 0 4.6 1.02 1 1 2 1 61.054 61.092 2;3 0.00017132 18763 20230619_1883_Aki_TMTPro18x_K_F4 101.71 87.806 330610 278280 305440 355160 267090 294150 343000 315560 323990 357520 365770 343430 372570 330040 384840 421270 355190 418510 305570 255380 312100 351540 282420 302600 340920 322240 332940 358570 373600 349050 380640 345690 389710 421600 340570 397300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 806840000 13933 1746 13171 26677;26678;26679;26680;26681 21429;21430 21429 2 9606 Homo sapiens -0.01970958738866102 ITFDDYIACCVK Unmodified 1503.6738 0.67378676 2734 C9J0K6;P30626-2;P30626;P30626-3;B4DHQ6 SRI Sorcin yes no 0 0 0 6.5 0.5 1 1 61.839 61.885 3 1.1271E-05 18636 20230619_1887_Aki_TMTPro18x_K_F7 133.89 114.82 294360 264940 299320 300410 265130 317030 312620 299370 287520 401880 311130 287220 375030 284180 290160 440780 398810 425660 272390 242790 303170 300790 279420 318960 311810 309770 296010 396980 320720 296840 376580 301820 303390 439030 380710 404360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 965820000 13934 2734 13172 26682;26683 21431 21431 1 9606 Homo sapiens -0.057903177711750686 ITFQHPGR Unmodified 954.50355 0.50354903 2284 B4DSK7;B2RAG9;Q15648;Q15648-3 MED1 Mediator of RNA polymerase II transcription subunit 1 yes no 0 0 0 3 0 1 36.704 36.759 3 0.01644 8270 20230619_1882_Aki_TMTPro18x_K_F3 77.318 64.528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13935 2284 13173 26684 21432 21432 1 9606 Homo sapiens 0.024477401944295707 ITGCASPGK Unmodified 889.43275 0.43275186 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 4.5 3.5 1 1 39.598 39.593 2;3 0.0031199 9331 20230619_1888_Aki_TMTPro18x_K_F8 73.985 58.323 76722 50413 92257 97511 128780 125840 92479 120670 113100 71351 98890 99966 92159 82218 105000 61532 112670 92080 70974 46559 92969 94891 129760 124920 96075 122230 113370 75668 101880 99576 94918 84310 106710 64035 107580 87210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48297000 13936 3622 13174 26685;26686 21433;21434 21434 2 9606 Homo sapiens -0.01638720905395985 ITGDPYK Unmodified 792.40177 0.4017693 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 6 0.816 1 1 1 44.557 44.64 2 0.015435 11486 20230619_1885_Aki_TMTPro18x_K_F5 120.45 70.144 732580 452410 628000 751350 935110 973930 843210 828820 1042400 833240 973750 901090 1014400 786520 794850 684050 1107400 920110 675560 417030 651970 736390 944640 964280 861360 856820 1047300 844500 1003300 907610 1023300 810440 828590 702750 1055200 872110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 726180000 13937 2644;4322 13175 26687;26688;26689 21435;21436 21435 2 9606 Homo sapiens -0.002735509479975917 ITGEAFVQFASQELAEK Unmodified 1866.9363 0.9363437 470 A0A024R7T3;P52597;B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 0 0 6.5 0.5 1 1 64.556 64.593 3 9.109899999999999E-19 19886 20230619_1887_Aki_TMTPro18x_K_F7 187 164.53 582080 503450 514410 611180 615590 670410 735410 726340 740180 660060 667110 599770 637980 609500 671270 747760 650350 742760 537910 461740 530420 609170 634520 674710 734460 736310 750660 668900 686400 612520 654100 635500 681340 748700 623100 705190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2646000000 13938 470 13176 26690;26691 21437;21438 21438 2 9606 Homo sapiens 0.037552977700215706 ITGLCQEEHR Unmodified 1241.5823 0.58226964 4047 Q5QPA5;Q9NVS2-3;Q9NVS2;Q9NVS2-2 MRPS18A 28S ribosomal protein S18a, mitochondrial yes no 0 0 0 3.5 0.5 1 1 36.953 37.001 3 3.6687E-08 8384 20230619_1882_Aki_TMTPro18x_K_F3 192.44 120.99 64463 54049 71190 69833 89099 78151 88053 89948 96157 82377 96707 78725 91008 74259 95939 69355 78403 69657 59668 49608 72002 69360 90917 78709 89096 90845 97471 83557 98847 79977 93240 76510 96351 69899 75125 66190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58708000 13939 4047 13177 26692;26693 21439;21440 21439 2 9606 Homo sapiens -0.028858203534809945 ITGPPERDDPYPVLFR Unmodified 1870.9577 0.95774784 4097 Q69YN4-4;Q69YN4-2;Q69YN4-3;Q69YN4;H0YBN5 KIAA1429 Protein virilizer homolog yes no 0 0 1 7 0 1 55.426 55.487 3 2.4764E-14 15981 20230619_1887_Aki_TMTPro18x_K_F7 175.26 147.85 43782 35712 42900 42802 41098 43682 42518 45443 52680 49618 54112 47349 52305 43600 53123 56211 52692 58070 40477 32756 43618 42670 42874 44156 43127 46407 53140 49858 55332 48085 53469 45779 54001 56377 50456 55115 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45077000 13940 4097 13178 26694 21441 21441 1 9606 Homo sapiens 0.057107275893486076 ITGQLESLESR Unmodified 1231.6408 0.64083038 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;A0A804HL78;O94854;A0A0A6YYJ5 MACF1;KIAA0754 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5;Uncharacterized protein KIAA0754 yes no 0 0 0 4 0 1 51.683 51.711 2 0.0073953 14750 20230619_1883_Aki_TMTPro18x_K_F4 80.245 50.501 46150 48572 56805 53082 87967 108870 73798 76930 98338 68163 85148 94117 74404 69218 81044 80147 87355 111930 42831 44475 57287 53960 88632 105090 75967 80510 98160 70223 87582 93511 76648 72805 82647 82136 83689 105890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85900000 13941 1566 13179 26695 21442 21442 1 9606 Homo sapiens 0.03427559492661203 ITGQSLGYGFVNYIDPK Unmodified 1870.9465 0.94651445 1058;945 P26378-4;A0A494C0F8;P26378;P26378-3;P26378-1;P26378-5;P26378-2;A0A494C147;B1APY9;A0A494C1D9;A0A0R4J2E6;B7Z5E0;A0A494C015;A0A494C173;A0A494C0Q5;A0A494C011;A0A494C0M6;A0A0A0MRX1;Q12926-2;Q12926;B1AM48 ELAVL4;ELAVL2 ELAV-like protein 4;ELAV-like protein;ELAV-like protein 2 no no 0 0 0 2 0 1 63.144 63.153 3 1.939E-06 20047 20230619_1881_Aki_TMTPro18x_K_F2 110.37 84.776 129040 97441 144700 184570 139270 166410 172690 125910 166610 174390 162860 185940 210250 142920 140890 199400 150340 211210 119380 89908 145890 178750 145980 168590 171910 132980 170050 174020 169450 186700 209520 152020 145360 199930 144180 200260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 453840000 13942 1058;945 13180 26696 21443 21443 1 9606 Homo sapiens 0.045879054952592924 ITGQSLGYGFVNYSDPNDADK Unmodified 2260.0284 0.02840618 3893 Q96J71;Q14576;Q14576-2 ELAVL3 ELAV-like protein;ELAV-like protein 3 yes no 0 0 0 6.5 0.5 1 1 61.134 61.181 3 1.3665E-11 18297 20230619_1887_Aki_TMTPro18x_K_F7 130.5 120.44 88281 73352 85598 105790 60440 64574 68768 73481 77838 102010 112480 120480 107730 95415 109470 110630 116760 125810 81619 67409 86893 103590 64995 68634 69244 75299 80240 102060 113640 120570 110200 100050 111700 111780 111710 119300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 474680000 13943 3893 13181 26697;26698 21444;21445 21445 2 9606 Homo sapiens -0.05120688674196572 ITHQIVDRPGQQTSVIGR Unmodified 2004.0865 0.086470602 2315 B5MCF9;B2RDF2;O00541;O00541-2;B3KXD6;B3KTZ6 PES1 Pescadillo homolog yes no 0 0 1 2.33 0.471 2 1 38.88 38.942 3;4 2.0343E-38 9318 20230619_1881_Aki_TMTPro18x_K_F2 250.86 229.3 256030 180030 231700 278930 271620 263920 267130 246390 285840 296620 322220 345880 332940 267170 292450 355010 352600 362000 236350 165700 238230 273170 278620 267620 270200 254450 291710 298530 329500 346210 337460 282880 301770 355530 336840 343720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 729800000 13944 2315 13182 26699;26700;26701 21446;21447 21446 2 9606 Homo sapiens 0.12459082552277323 ITHYFIDLNK Unmodified 1262.6659 0.66592292 42 A0A024QZK4;Q96FC7;Q96FC7-2 PHYHIPL Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 0 2 0 1 56.306 56.324 3 1.3445E-05 17122 20230619_1881_Aki_TMTPro18x_K_F2 146.17 99.464 283490 189090 230210 265370 128500 164410 210740 231010 300820 305300 267570 333170 364130 332690 229040 516830 431300 546740 261430 173870 236960 260410 144210 175360 210640 233490 300190 305410 280580 337160 362600 352890 248080 517050 411510 518550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35768000 13945 42 13183 26702 21448;21449 21449 2 9606 Homo sapiens 0.045096590858975105 ITHYFIDLNKK Unmodified 1390.7609 0.76088593 42 A0A024QZK4;Q96FC7;Q96FC7-2 PHYHIPL Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 1 4 0 1 52.887 52.91 4 0.0013126 15346 20230619_1883_Aki_TMTPro18x_K_F4 91.313 71.99 144420 115420 144550 134280 77196 92641 123510 122150 135500 153110 156160 138380 152440 123810 152390 146040 141450 138500 133530 105850 145750 133620 86813 97549 122340 123630 138220 152560 158990 140680 155610 129400 154330 146020 135420 131640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 856080000 13946 42 13184 26703 21450 21450 1 9606 Homo sapiens 0.08113592557060656 ITIADCGQLE Unmodified 1118.5278 0.52777445 2036;3735 P62937;A8K486;V9HWF5;B4DM82;P62937-2 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase no no 0 0 0 3 0.816 1 1 1 57.506 57.523 2 0.001896 17576 20230619_1881_Aki_TMTPro18x_K_F2 100.15 88.998 345850 293400 300520 328100 281810 339400 333070 323330 400790 362230 343860 352040 408510 360930 321160 467780 443750 470080 319520 268890 308970 328720 296010 342010 334930 332530 402220 363860 358290 358350 410990 377650 335700 468010 423570 446360 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2882200000 13947 2036;3735 13185 26704;26705;26706 21451;21452;21453;21454 21451 4 9606 Homo sapiens -0.026748322248977274 ITIGQAPTEK Unmodified 1056.5815 0.58152458 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 6.33 0.471 2 1 47.571 47.655 2 1.1656E-23 12886 20230619_1886_Aki_TMTPro18x_K_F6 222.28 168.07 287070 205910 220250 253560 268850 315420 249760 258440 328590 365720 404770 427890 405590 353120 319240 457240 423300 418040 264730 189010 230220 252890 275370 312930 255450 270790 333510 365740 411750 429040 409930 372060 332660 455220 403970 397490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 339830000 13948 2973 13186 26707;26708;26709 21455;21456 21455 2 9606 Homo sapiens 0.0554970826913177 ITISPLQELTLYNPER Unmodified 1886.0149 0.014928368 3211 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 4.5 3.5 1 1 63.839 63.85 3 1.0531000000000001E-33 19469 20230619_1888_Aki_TMTPro18x_K_F8 247.38 235.02 46253 42835 48500 50381 34650 44853 57185 55796 48279 51890 52705 62902 63305 53183 58974 68530 62638 60118 42822 39264 48903 50214 37698 46014 56092 56158 49878 52951 54421 63026 64065 55969 60299 68126 59879 57198 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204880000 13949 3211 13187 26710;26711 21457;21458 21458 2 9606 Homo sapiens 0.10736150075081241 ITITNDK Unmodified 803.43888 0.43888309 3430;1031;1463 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96BE0;E9PS65;P54652;A0A024R6B5;A0A384MDT7;Q96H53;E9PM13;B3KUS2;P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNX1;B4E1T6;Q53FC7;B3KSM6;B2R6X5;A0A384NKX5;P17066;B4DHP5 HSPA8;HEL-S-72p;HSPA2;HSPA1A;HSPA1B;HEL-S-103;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 6 no no 0 0 0 6.5 1.12 1 1 1 1 44.904 44.975 2 0.010182 11638 20230619_1886_Aki_TMTPro18x_K_F6 126.57 47.42 822500 383930 1108400 1026600 1376900 1627900 1166400 1416100 1220100 992670 1325100 1427800 1320500 1221600 1267500 619420 1515800 1310600 760690 357370 1105800 990570 1403300 1593700 1191000 1448900 1243400 1039400 1355300 1421300 1346000 1235400 1299600 673260 1446500 1238300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4255799999.9999995 13950 3430;1031;1463 13188 26712;26713;26714;26715 21459;21460 21459 2 9606 Homo sapiens 0.02930120597761743 ITITNDQNR Unmodified 1073.5465 0.54653606 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 5 0.816 1 1 1 38.802 38.874 2 2.6706E-06 9021 20230619_1885_Aki_TMTPro18x_K_F5 211.48 145.05 299640 174600 307250 323100 410010 448700 393660 415120 472990 304630 370410 363280 351700 298050 401790 235090 416190 333230 276630 161240 313160 315470 417340 443110 400240 423300 472690 315860 384150 363810 361960 306390 407490 243350 397490 315770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1354400000 13951 3429 13189 26716;26717;26718 21461;21462;21463 21462 3 9606 Homo sapiens 0.01270465461175263 ITKPGSIDSNNQLFAPGGR Unmodified 1971.0174 0.017387984 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 1 3 0 1 50.9 50.971 3 9.0298E-50 14530 20230619_1882_Aki_TMTPro18x_K_F3 287.38 267.33 314100 252080 285090 319050 247490 313450 315130 317280 309600 369850 326760 306370 391450 267000 331570 347020 299500 261240 290190 231350 291720 316610 262170 317370 313760 325270 316800 368870 337150 312560 394060 281180 336520 342650 286600 249170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 849010000 13952 1676;2901 13190 26719 21464 21464 1 9606 Homo sapiens 0.07071998532751422 ITKPTIDEK Unmodified 1043.5863 0.58627561 949 A0A0A0MSA7;A0A8I5QJH9;A0A804HJV5;A0A8J9G7U8;A0A8I5KT99;A0A0U1RQK7;Q59GJ0;A0A8I5KV92;O43432-4;O43432;O43432-3;B4DZE1;B4DH17 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes no 0 0 1 7 0 1 45.278 45.364 3 0.016956 11457 20230619_1887_Aki_TMTPro18x_K_F7 72.096 29.757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13953 949 13191 26720 21465 21465 1 9606 Homo sapiens 0.06622592411895312 ITLDNAYMEK Oxidation (M) 1212.5696 0.56963927 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;A0A024R609;H3BQ34;H3BUW1;H3BTJ2;H3BT25;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 1 0 5.14 0.833 2 2 3 51.117 51.178 2;3 0.00020147 14409 20230619_1886_Aki_TMTPro18x_K_F6 134.57 94.214 487700 391830 431140 508930 588000 597240 577820 552560 596500 694610 733060 742810 776590 631720 658110 830920 755810 774480 450480 359710 445490 505330 597720 596320 583730 571400 612640 695650 747600 748290 785370 665840 677660 828130 722340 736140 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3371499999.9999995 13954 370;3451 13192 26721;26722;26723;26724;26725;26726;26727 21466;21467;21468;21469;21470 21468 224 5 9606 Homo sapiens -0.02814276536378202 ITLDNAYMEK Unmodified 1196.5747 0.57472465 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;A0A024R609;H3BQ34;H3BUW1;H3BTJ2;H3BT25;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 5.5 1.12 1 1 1 1 55.492 55.545 3 0.00011968 15968 20230619_1887_Aki_TMTPro18x_K_F7 126.39 102.64 69542 52237 56207 60945 60805 76616 67848 66964 73133 87769 79333 85112 96279 79357 81857 97815 88671 89741 64169 47916 58318 61039 63094 76049 68170 69617 74558 87493 81885 86311 97022 83029 83955 97506 84781 85318 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2226400000 13955 370;3451 13192 26728;26729;26730;26731 21471 21471 1 9606 Homo sapiens -0.015699726737466335 ITLEVAK Unmodified 772.46945 0.46945494 3566 P38606-2;P38606;A0A994J738;B7Z2V6;A0A994J477 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 0 8 0 1 51.976 52.053 3 0.067295 14409 20230619_1888_Aki_TMTPro18x_K_F8 58.194 14.379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13956 3566 13193 26732 21472 21472 1 9606 Homo sapiens 0.07411898982809362 ITLNDLIPAFQNLLK Unmodified 1711.9873 0.98725705 2118 A8K8B0;P30154;P30154-2;P30154-4;P30154-3;B7Z1G3;P30154-5 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 5.5 0.5 1 1 67.44 67.483 3 1.269E-05 21342 20230619_1886_Aki_TMTPro18x_K_F6 111.12 83.978 9187 8503.5 7883.3 9144.6 7634 8433.8 10030 7162.7 8048 10120 7183.4 6808.3 9141.3 6991.2 7685 10240 9114.2 8044 8492 7788.3 8121.7 9174.4 8009.5 8558.6 9906.5 7494.6 8293.3 9967.6 7496.4 7068.7 9195.3 7381.3 7932.8 10107 8699.2 7667.4 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8590000 13957 2118 13194 26733;26734 21473;21474 21474 2 9606 Homo sapiens 0.15974291605516555 ITLPVDFVTADK Unmodified 1317.718 0.71801807 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DHB3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 7.5 0.5 1 1 63.127 63.155 3 5.92E-10 19154 20230619_1888_Aki_TMTPro18x_K_F8 182.35 140.81 370780 262610 287200 383880 262310 423420 312960 316140 508750 429210 484640 736210 700800 718610 383600 1010200 889790 1433800 341920 241520 299040 377830 277480 422240 318640 333690 506100 437540 509070 733090 694860 757250 427260 1031800 850220 1355300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1557199999.9999998 13958 3374 13195 26735;26736 21475;21476 21476 2 9606 Homo sapiens 0.07186777708989212 ITLPVDFVTADKFDENAK Unmodified 2022.031 0.030972363 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DHB3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 1 6.5 0.5 1 1 62.604 62.647 3 1.0421E-13 19303 20230619_1886_Aki_TMTPro18x_K_F6 156.58 143.15 609320 510990 586530 660800 593150 619930 571910 572030 557140 771560 721750 681200 722320 620030 820550 687400 633880 596520 563330 469010 598120 654360 614670 629050 577880 593180 576150 765920 732880 693330 741530 645080 821610 685200 608030 567670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5350200000 13959 3374 13196 26737;26738 21477;21478 21477 2 9606 Homo sapiens 0.060838115213300625 ITLRPDPLPER Unmodified 1305.7405 0.74048484 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1;F8VU51;H0YI23;B4DMQ9 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 1 7 0 1 46.134 46.222 3 0.0037252 11891 20230619_1887_Aki_TMTPro18x_K_F7 58.781 34.826 81146 63079 69559 78966 72040 75095 87973 86168 96716 91883 83797 88757 101360 86584 81414 98877 115690 91141 74922 57893 71721 78401 75050 76497 88029 87425 97549 92463 87379 90162 101990 90028 85111 98693 110190 86738 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69492000 13960 3610 13197 26739 21479 21479 1 9606 Homo sapiens 0.09984421897252105 ITLTCGR Unmodified 819.42727 0.42727255 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 0 1.5 0.5 1 1 41.313 41.352 2 0.019071 10414 20230619_1881_Aki_TMTPro18x_K_F2 106.42 79.619 354540 274830 328190 346540 441680 451190 440790 436610 521280 406240 425650 464170 473180 386500 407920 493250 531560 438460 327520 252250 337400 345440 449620 448010 446800 446150 522460 414150 443530 466010 478400 406810 423200 490670 506750 417380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 270000000 13961 2181 13198 26740;26741 21480;21481 21481 2 9606 Homo sapiens 0.010336003027987317 ITLTSDPR Unmodified 901.4869 0.48689592 3025 H0Y614;P61960 UFM1 Ubiquitin-fold modifier 1 yes no 0 0 0 5.5 0.5 1 1 42.649 42.738 2 0.0012236 10676 20230619_1886_Aki_TMTPro18x_K_F6 146.21 84.369 87055 64920 76307 83827 91520 97799 84457 84719 116770 82195 95381 96977 89262 79929 93251 94398 122010 97712 80371 59612 78671 83264 93732 97536 86551 87399 116160 83736 98617 97218 91564 83751 96334 94819 116290 92861 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164560000 13962 3025 13199 26742;26743 21482 21482 1 9606 Homo sapiens 0.03221194517800541 ITLVSAAPGK Unmodified 955.57023 0.57023162 4564 Q9NPJ3-2;Q9NPJ3 ACOT13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes no 0 0 0 2.5 0.5 1 1 51.689 51.755 3 0.0031043 15238 20230619_1881_Aki_TMTPro18x_K_F2 85.807 65.471 221890 182750 190340 223370 241860 273490 274850 235860 291070 221350 250110 221950 224640 207110 197650 256350 259050 220980 204940 167650 197010 222840 248120 271870 275510 243280 293690 224700 257220 225010 229000 216600 205170 254690 247000 210400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177780000 13963 4564 13200 26744;26745 21483;21484 21483 2 9606 Homo sapiens 0.09066930965661868 ITMIAEPLEK Unmodified 1143.6209 0.62094656 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2;K7EP67 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 6 0.707 1 2 1 59.413 59.469 2;3 2.5642E-09 17885 20230619_1886_Aki_TMTPro18x_K_F6 197.27 126.05 159960 120760 134540 166620 131280 166010 151670 150990 175830 178590 172830 166770 184430 152350 171120 193760 184310 183750 147640 110960 138950 164400 137430 167490 152510 156060 177710 178670 177940 169390 187210 159840 175090 193420 176220 174640 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 147690000 13964 2436 13201 26746;26747;26748;26749 21485;21486;21487 21486 3 9606 Homo sapiens 0.05488092228347341 ITMIAEPLEK Oxidation (M) 1159.6159 0.61586118 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2;K7EP67 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 1 0 6 0 1 54.586 54.663 3 0.02686 15907 20230619_1886_Aki_TMTPro18x_K_F6 52.6 25.271 67671 65588 75569 69077 67931 81887 85922 73076 107220 73710 76637 80908 80886 68043 81467 81817 86849 88159 62706 60052 75974 69688 71704 81642 86201 75320 106680 74761 80299 81371 82463 71352 83129 82353 83053 83662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128560000 13965 2436 13201 26750 21488 21488 1504 1 9606 Homo sapiens 0.0424378836573851 ITNDFYPEEDGK Unmodified 1426.6252 0.62523989 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q86UM1;C9JZG1 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 2.5 0.5 1 1 53.779 53.82 2 1.038E-06 15860 20230619_1882_Aki_TMTPro18x_K_F3 187.58 165.05 121900 99534 104940 119330 97049 107260 111470 109960 116000 154450 149460 137690 169360 124260 126400 169090 153450 155670 112590 91294 107970 118730 101850 109470 111760 113360 119450 153120 152520 140140 170040 131090 131010 168320 146570 147990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127970000 13966 487 13202 26751;26752 21489;21490 21490 2 9606 Homo sapiens -0.07100771815044027 ITNHIHVR Unmodified 988.55665 0.55664724 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 2 0 1 30.795 30.861 3 0.00027894 6064 20230619_1881_Aki_TMTPro18x_K_F2 135 100.61 44645 31125 33597 41956 41938 42801 34112 43249 53206 37034 38485 33493 32443 25188 34997 36048 39751 31856 41159 28602 35209 41477 42735 43227 35454 43964 52491 37676 39878 33906 33422 26839 35808 35814 37933 30330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41780000 13967 2702 13203 26753 21491 21491 1 9606 Homo sapiens 0.06191117977084559 ITNNINVLIK Unmodified 1140.6867 0.68665836 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;Q9BZZ5-5;Q9BZZ5-6;B4DDR3;Q9BZZ5-3;H0YER7 API5 Apoptosis inhibitor 5 yes no 0 0 0 3 0 1 58.773 58.802 3 0.00013792 17922 20230619_1882_Aki_TMTPro18x_K_F3 116.23 59.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13968 4478 13204 26754 21492 21492 1 9606 Homo sapiens 0.12194249465551366 ITNQVHGLK Unmodified 1008.5716 0.5716286 2310 B2RD27;P51665;B4DXI8 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes no 0 0 0 2 0.816 1 1 1 41.272 41.318 3 0.00032754 10371 20230619_1881_Aki_TMTPro18x_K_F2 118.4 63.999 391630 266440 337800 364710 410490 458150 403440 402330 527610 431250 482470 408070 474470 360610 390220 442650 577540 437610 361340 244910 348880 361340 420830 454810 410960 415570 528360 433850 496130 414020 480430 378120 408830 443090 549810 416210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 399450000 13969 2310 13205 26755;26756;26757 21493 21493 1 9606 Homo sapiens 0.0676856505442629 ITNQVIYLNPPIEECR Unmodified 1957.9931 0.99314707 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 6 0 1 59.764 59.825 3 0.00023257 18110 20230619_1886_Aki_TMTPro18x_K_F6 88.637 76.234 54521 39560 67350 60845 52104 56045 66291 55031 74397 67667 71562 67382 84162 69369 71025 90762 76727 93366 50477 36402 67081 59632 55661 57002 66271 56679 75204 67737 74076 68550 84861 72644 72885 90941 73472 88591 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 111050000 13970 3881 13206 26758 21494;21495 21495 2 9606 Homo sapiens 0.052470220548684665 ITNSLTVLCSEK Unmodified 1363.7017 0.70171607 355 A0A024R5S5;O75822;O75822-3;O75822-2;H0YGJ7;H0YLP3 EIF3S1;EIF3J Eukaryotic translation initiation factor 3 subunit J yes no 0 0 0 1 0 2 57.391 57.391 2;3 1.654E-12 17430 20230619_1880_Aki_TMTPro18x_K_F1 218.01 139.07 169840 154100 170120 171820 171250 187390 181900 172090 190350 154990 135450 114280 143520 105820 163300 164920 152550 116220 157160 141200 172810 172330 178040 188010 183040 176440 191230 156390 141850 117730 147070 112600 165110 162060 145810 111040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 876040000 13971 355 13207 26759;26760 21496;21497 21497 2 9606 Homo sapiens 0.03441328480539596 ITPAHDQNDYEVGQR Unmodified 1741.802 0.80197548 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1 VARS Valine--tRNA ligase yes no 0 0 0 2.5 0.5 1 1 37.262 37.319 3 2.7291999999999998E-52 8601 20230619_1881_Aki_TMTPro18x_K_F2 302.74 283.91 248850 179950 210490 231740 234950 263100 248430 234790 274110 347950 358290 356950 395050 310700 320300 407120 421910 385880 229640 165260 217520 230140 242610 263020 250550 244870 281510 345760 365170 360440 398360 327210 333090 406120 402440 366870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1112200000 13972 725 13208 26761;26762 21498;21499;21500 21499 3 9606 Homo sapiens -0.03925342932075182 ITPDGITK Unmodified 843.47018 0.47018322 1642 A0A7G6J4N4;Q14694;Q14694-3;Q14694-2;H3BQC6 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 0 0 0 7 0 1 47.554 47.642 2 0.013689 12495 20230619_1887_Aki_TMTPro18x_K_F7 87.476 15.599 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13973 1642 13209 26763 21501 21501 1 9606 Homo sapiens 0.042186936318557855 ITPELLTR Unmodified 941.55458 0.55458155 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J432;A0A994J428;B3KRA9;A0A994J4Q4;A0A994J6R6;A0A994J4P6 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 7.5 0.5 1 1 51.808 51.884 2 0.027374 14346 20230619_1888_Aki_TMTPro18x_K_F8 82.426 39.557 739860 666980 745720 809060 788860 960290 1017400 992450 1125200 931250 888500 936370 1094600 849440 910860 1048200 996900 947390 684610 611620 758410 807470 822720 960010 1015400 1009900 1130400 944890 932080 947540 1101500 889830 934920 1044200 952650 901080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 802540000 13974 43 13210 26764;26765 21502;21503 21503 2 9606 Homo sapiens 0.0814664444861819 ITPENLPQILLQLK Unmodified 1618.9658 0.96579333 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 0 3.67 0.471 1 2 65.877 65.896 2;3 3.0378E-06 20774 20230619_1883_Aki_TMTPro18x_K_F4 128.17 97.092 22203 16384 19516 19314 13518 20062 21472 20200 21821 18693 20309 16392 20632 16710 19020 19855 19968 20722 20497 15031 19965 19282 14772 20221 21202 20591 22132 18909 20898 16778 20964 17402 19426 19948 19101 19670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 210790000 13975 1059 13211 26766;26767;26768 21504;21505 21505 2 9606 Homo sapiens 0.1810690657680425 ITPLEIEVLEETVQTMDTS Oxidation (M) 2163.0504 0.050446755 2906 Q86U62;Q6IBT1;E9KL30;Q99436;B2RAQ9 PSMB7 Proteasome subunit beta type;Proteasome subunit beta type-7 yes no 0 1 0 2 0.816 1 1 1 67.141 67.157 3 0.0037663 21660 20230619_1881_Aki_TMTPro18x_K_F2 65.943 57.234 4694.7 1530.4 3324.1 4925.9 2911.6 5068.4 2656.1 5448.4 4175.8 4387.9 5604.7 4225 3104.2 4618.4 3861.3 4356.5 3769.3 4508.7 4314.2 1415.4 3494.9 4688.4 3072.3 5110 2750 5503.7 4221.8 4484.8 5563.6 4316.2 3295.8 4728.7 3911.6 4390.2 3612.5 4278.1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5552500 13976 2906 13212 26769;26770;26771 21506 21506 1724 1 9606 Homo sapiens 0.015443549592419004 ITPLEIEVLEETVQTMDTS Unmodified 2147.0555 0.055532133 2906 Q86U62;Q6IBT1;E9KL30;Q99436;B2RAQ9 PSMB7 Proteasome subunit beta type;Proteasome subunit beta type-7 yes no 0 0 0 2 0 1 69.584 69.591 3 0.052587 22516 20230619_1881_Aki_TMTPro18x_K_F2 41.554 25.789 0 0 0 0 703.64 1043.4 944.56 0 1295.8 1012.2 815.96 0 908.76 701.41 0 0 1473.7 0 0 0 0 0 684.08 951.29 944.54 0 1280.5 941.63 856.52 0 882.59 664.86 0 0 1385.6 0 0 0 0 0 1 1 1 0 1 1 1 0 1 1 0 0 1 0 938180 13977 2906 13212 26772 21507 21507 1 9606 Homo sapiens 0.027886588218734687 ITPSYVAFTPEGER Unmodified 1565.7726 0.77257283 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 5.29 1.03 2 2 2 1 55.168 55.221 2;3 2.716E-22 16081 20230619_1886_Aki_TMTPro18x_K_F6 229.97 210.84 279890 223300 268020 292150 266290 305400 336080 338680 368240 345550 353620 337230 377250 302940 318870 409170 368960 379210 258680 205010 273430 289570 278710 308500 335800 343840 372690 348590 364390 341790 381420 319290 328550 407510 352610 360450 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 3203199999.9999995 13978 3429 13213 26773;26774;26775;26776;26777;26778;26779 21508;21509;21510;21511;21512;21513 21513 6 9606 Homo sapiens 0.012317447897657985 ITPVTVK Unmodified 756.47454 0.47454032 3905 Q14978-3;B2RAU8;A0A0A0MRM9;Q14978;Q14978-2;S4R349;S4R3C2 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 0 0 0 1.5 0.5 1 1 47.35 47.388 2 0.0029428 13189 20230619_1881_Aki_TMTPro18x_K_F2 158.36 80.609 759230 478120 758660 827290 920790 1043200 820080 857800 1081500 820730 923000 1010000 1055200 882190 896610 781140 1066500 972810 701020 440930 773540 808840 941580 1033600 840860 888130 1080100 837920 960690 1011800 1065300 909130 923140 797880 1018100 922290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 872530000 13979 3905 13214 26780;26781 21514 21514 1 9606 Homo sapiens 0.08656202845418193 ITQDIFQQLLK Unmodified 1345.7606 0.76055158 2037 A8K492;P56192;B4DF61;B4E0E9;P56192-2;H0YHV5 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 64.476 64.496 3 0.00022881 20334 20230619_1882_Aki_TMTPro18x_K_F3 108.77 69.503 64066 58023 57523 65496 50265 59321 65281 71276 72488 72835 74665 72016 76062 65570 83637 84075 71420 87141 59230 53170 58924 65477 53235 60735 65202 72021 73527 73481 76577 72966 77933 68836 84251 84359 68561 82677 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 131900000 13980 2037 13215 26782;26783 21515;21516 21516 2 9606 Homo sapiens 0.10150172837211358 ITQLDGVTCSLR Unmodified 1361.6973 0.6972994 4795 yes no 0 0 0 6 0 1 44.246 44.338 2 0.0091969 11384 20230619_1886_Aki_TMTPro18x_K_F6 79.474 17.795 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13981 4795 13216 26784 21517 21517 1 9606 Homo sapiens 0.030918640576828693 ITQQGTDPLVLAVQSK Unmodified 1696.9359 0.93594977 4233 Q8N556-2;Q8N556 AFAP1 Actin filament-associated protein 1 yes no 0 0 0 1 0 1 60.579 60.579 3 4.8028E-08 18716 20230619_1880_Aki_TMTPro18x_K_F1 124.43 110.2 43052 32479 37228 40357 32939 37797 44276 43566 47611 43783 42111 46052 50108 41554 47298 54273 56527 56020 39745 29811 38262 40085 34880 38544 44087 44122 48095 44305 43852 46504 50762 43694 48691 54409 53992 53191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40776000 13982 4233 13217 26785 21518 21518 1 9606 Homo sapiens 0.11535922840789681 ITQSEFDR Unmodified 994.47197 0.47197413 828 A0A140VJU5;A0A994J549;A0A087WW40;Q9Y371;Q9Y371-2;Q9Y371-3 SH3GLB1 Endophilin-B1 yes no 0 0 0 3 0 1 41.875 41.937 2 0.0023218 10417 20230619_1882_Aki_TMTPro18x_K_F3 128.57 93.217 87879 65484 79273 93333 191120 103570 109650 94757 131810 102440 109730 105610 121890 132350 93154 127720 127000 123520 81148 60196 82861 92052 186680 104030 115870 97669 132210 103350 114100 108040 122890 135260 97288 128100 121170 117380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93928000 13983 828 13218 26786 21519 21519 1 9606 Homo sapiens -0.025482973501880224 ITQSNAILR Unmodified 1014.5822 0.58219329 3483;1487 Q6FGJ9;P21266;Q59EJ5;A4UJ43;Q6ZSP8;P28161;A0A384P5E9;P28161-2;F6XZQ7;Q0D2I8;E9PHN6;A8HT81;E9PHN7;E9PLF1;P46439;Q5T8R2;A0A3B3IRM5;Q9UE37;Q5T8R1 GSTM3;GSTM2;GSTM5;GSTmu3 Glutathione S-transferase Mu 3;Glutathione S-transferase Mu 2;Glutathione S-transferase Mu 5 no no 0 0 0 1.5 0.5 1 1 43.81 43.851 2 1.141E-05 11569 20230619_1881_Aki_TMTPro18x_K_F2 182.29 121.4 597260 519660 497300 514900 798050 960650 743690 720870 1158400 163280 179060 198120 185830 156790 375520 180310 236390 177160 551730 475730 518330 526310 805380 931870 764550 737880 1114300 198190 230570 198600 198870 164300 369720 181290 227110 168510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 705130000 13984 3483;1487 13219 26787;26788 21520;21521 21521 2 9606 Homo sapiens 0.07548547708847764 ITRPGNTDDPSGGNK Unmodified 1527.7277 0.7277479 1144 C9IYN3;A8K894;V9GYK2;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9-4;Q8WVV9;B7WPG3;Q8WVV9-5;A0A0S2Z610;Q8WVV9-3;Q8WVV9-2;H7BXH8;C9JJZ7 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 0 0 1 5.5 0.5 1 1 35.438 35.491 3 0.00031127 7810 20230619_1886_Aki_TMTPro18x_K_F6 92.269 64.303 29008 18891 37293 36424 54206 55747 45006 48507 47973 40055 48590 41036 47941 36549 61359 23001 42728 40500 26852 17446 37441 35564 54661 54711 46014 49798 48713 40978 49782 41452 49527 37186 60912 24442 41046 38290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48221000 13985 1144 13220 26789;26790 21522;21523 21523 2 9606 Homo sapiens -0.0150068602358715 ITSEAEDLVANFFPK Unmodified 1679.8407 0.8406524 180 V9HWJ8;A0A024R203;P61289;P61289-3;P61289-2;K9J957;J7FRP4;K7ENH2;B7Z8D3 HEL-S-283;PSME3 Proteasome activator complex subunit 3 yes no 0 0 0 7 0.816 2 2 2 65.774 65.803 3;4 1.4993E-10 20411 20230619_1887_Aki_TMTPro18x_K_F7 157.52 137.94 40160 32314 38255 40430 34951 40849 43143 44110 46826 48466 49261 44647 49155 39157 39075 47763 43847 46095 37116 29653 38988 40176 36806 41344 43152 44949 47601 48620 50379 45326 49672 41043 40225 47742 41922 43791 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1810799999.9999998 13986 180 13221 26791;26792;26793;26794;26795;26796 21524;21525;21526 21525 3 9606 Homo sapiens 0.027925696497277386 ITSEAIGQLHR Unmodified 1223.6622 0.66223452 4693 Q9UNY4-2;Q9UNY4 TTF2 Transcription termination factor 2 yes no 0 0 0 7 0 1 43.278 43.357 3 0.024847 10654 20230619_1887_Aki_TMTPro18x_K_F7 57.477 23.164 33330 27238 28871 27158 30918 36767 34066 27951 47412 27825 31377 27013 30600 22359 29102 32916 30904 33072 30785 24942 29724 27575 32093 36256 34548 29175 46833 28157 32880 27334 31169 23795 29741 32902 29566 31402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33657000 13987 4693 13222 26797 21527 21527 1 9606 Homo sapiens 0.05934989312027028 ITSEALLVTQQLVK Unmodified 1541.9029 0.90285872 2126 A8K8U1;Q86VP6;H0YH27;Q86VP6-3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 2 0 1 63.437 63.446 3 5.4909E-09 20162 20230619_1881_Aki_TMTPro18x_K_F2 161.48 141.1 54911 41635 41711 49026 49674 54445 59496 41039 56267 52477 44652 43594 52642 37889 55872 54876 45585 42474 50651 38193 43641 48961 51238 54352 59254 43218 57063 52180 46733 44469 53573 40190 56183 54186 43693 40485 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1346400000 13988 2126 13223 26798 21528 21528 1 9606 Homo sapiens 0.15358340788748137 ITSEIPQTER Unmodified 1172.6037 0.60371659 3766 P82979;Q567R9;H0YHG0;F8VZQ9 SARNP;CIP29 SAP domain-containing ribonucleoprotein yes no 0 0 0 3.5 0.5 1 1 43.496 43.553 2 9.6049E-07 11145 20230619_1882_Aki_TMTPro18x_K_F3 180.27 141.31 388100 314010 329010 376000 421200 454240 417100 399520 506510 466090 511150 475520 530960 432540 419730 574590 582190 541320 358390 288030 340810 375590 430290 452210 423460 413720 511070 467950 524690 481210 536020 455150 438570 572780 555180 514660 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 634780000 13989 3766 13224 26799;26800 21529;21530;21531 21530 3 9606 Homo sapiens 0.02431887946909228 ITSENPDEGFKPSSGTVQELNFR Unmodified 2551.2191 0.2190605 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49;O00763;O00763-2;O00763-3 ACACA;hCG_30204;ACACB Acetyl-CoA carboxylase 1;Biotin carboxylase;Acetyl-CoA carboxylase 2;Biotin carboxylase yes no 0 0 1 5.5 0.5 1 1 54.642 54.714 3 5.2164E-20 15895 20230619_1886_Aki_TMTPro18x_K_F6 167.36 153.77 59496 49594 58857 52048 32489 31731 38435 38611 43543 58168 58736 45406 59697 49133 52794 75323 55141 52010 55016 45430 59378 52155 35970 33840 38646 39520 44734 57327 59494 46890 60551 51927 54063 73900 52714 49658 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199890000 13990 3833 13225 26801;26802 21532 21532 1 9606 Homo sapiens 0.005499729170878709 ITSEPQDADVTSGNTVYFTCR Unmodified 2360.0591 0.059054381 4302 Q92626;C9J4I9;H7C1W1;Q92626-2;H7C300 PXDN Peroxidasin homolog yes no 0 0 0 4 0 1 53.625 53.644 3 3.6798E-08 15669 20230619_1883_Aki_TMTPro18x_K_F4 110.34 105.33 25544 19593 24232 26306 24992 30237 30846 28017 33627 38728 32971 31633 37349 33286 36773 36240 33533 33652 23601 17997 24756 26060 26078 30217 30838 29061 34113 38352 34051 32482 37957 34435 37222 36234 32116 31990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26438000 13991 4302 13226 26803 21533 21533 1 9606 Homo sapiens -0.06657278351576679 ITSFPESEGYSYETSTK Unmodified 1924.8578 0.8578186 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 4 0.816 1 1 1 55.413 55.452 3 2.3905E-13 16422 20230619_1883_Aki_TMTPro18x_K_F4 148.03 132.94 210580 182500 203000 233110 179900 205500 220610 217680 215930 284360 285910 287630 292220 245310 263950 349440 318050 362490 194730 167470 206690 230880 189790 210180 220060 223400 223310 283740 290340 290520 296710 260000 272380 349910 304090 343990 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1098800000 13992 630 13227 26804;26805;26806 21534;21535;21536 21535 3 9606 Homo sapiens -0.06761599325750467 ITSGPFEPDLYK Unmodified 1365.6816 0.68163256 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 6.6 1.02 1 1 2 1 59.838 59.887 2;3 3.7247E-10 18023 20230619_1886_Aki_TMTPro18x_K_F6 155.48 120.95 228880 200030 215380 231560 181530 238660 231750 232170 257450 276200 257200 277540 331430 266230 245450 333330 285980 316280 211620 183370 219550 231400 192930 240600 231620 238830 261020 276810 267220 281320 331730 278610 253830 332670 273440 300470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1108000000 13993 654 13228 26807;26808;26809;26810;26811 21537;21538;21539 21538 3 9606 Homo sapiens 0.013419008122582454 ITSNCTIGLR Unmodified 1133.5863 0.58629239 3175 K7ESK0;K7ERX6;Q9UPT9-2;Q9UPT9;J3QS30 USP22 Ubiquitin carboxyl-terminal hydrolase 22 yes no 0 0 0 2 0 1 45.17 45.252 2 2.3135E-05 12256 20230619_1881_Aki_TMTPro18x_K_F2 158.85 135.06 65385 51390 60530 58704 59504 65983 67243 65127 79145 73332 77869 72340 81598 66338 63767 89961 91714 76509 60407 47121 61867 58808 62123 66163 67724 66811 79891 73659 80057 73338 82325 69871 66838 89193 87376 72867 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39765000 13994 3175 13229 26812 21540 21540 1 9606 Homo sapiens 0.024842691402454875 ITSPLMEPSSIEK Unmodified 1430.7327 0.73268185 1160 A0A109NGN6;P28066;Q5U0A0 PSMA5 Proteasome subunit alpha type-5;Proteasome subunit alpha type yes no 0 0 0 6 0 1 57.164 57.236 3 0.00029699 16953 20230619_1886_Aki_TMTPro18x_K_F6 94.688 78.797 140070 125180 145670 123770 114760 153080 139570 132880 200790 121820 116140 106030 150680 120170 121630 143190 132790 146800 129630 114590 146940 125620 122620 152110 141160 136850 197480 123460 124560 108950 151300 124790 124930 143660 127040 139340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 311670000 13995 1160 13230 26813 21541;21542 21541 2 9606 Homo sapiens 0.03454481794847197 ITSQIFIGPTYYQR Unmodified 1685.8777 0.8777066 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40;B2WTN6 POLR2B;rpB2 DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 0 5 0 1 60.8 60.85 3 0.0015622 18246 20230619_1885_Aki_TMTPro18x_K_F5 83.633 60.407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13996 2484 13231 26814 21543 21543 1 9606 Homo sapiens 0.062202859861827164 ITSYFLNEGSQAR Unmodified 1484.726 0.72595699 3316 Q6UQL6;O75792;Q6IBG3 RNASEH2A;JUNB Ribonuclease;Ribonuclease H2 subunit A yes no 0 0 0 1 0 1 57.008 57.008 2 1.2467E-07 17252 20230619_1880_Aki_TMTPro18x_K_F1 196.16 172.07 35174 25890 32721 35411 24732 38760 31073 32162 39403 40907 44052 46456 49132 44135 37467 49823 51039 53432 32485 23789 33350 35009 26603 38753 31242 33553 39861 41053 45202 46832 49456 45897 39122 50142 48720 50703 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32898000 13997 3316 13232 26815 21544 21544 1 9606 Homo sapiens 0.0029830495845999394 ITTGAQDDLRK Unmodified 1216.6412 0.64116473 1777 D3DUJ0;A0A8I5KVV1;Q8TA92;Q9Y4W6;A0A8I5QJR7 AFG3L2 AFG3-like protein 2 yes no 0 0 1 6 0 1 40.901 40.996 3 5.4572E-05 9938 20230619_1886_Aki_TMTPro18x_K_F6 132.14 83.083 133720 115900 129820 141680 201140 199050 187840 186150 240900 174970 200110 201890 199890 171540 173180 199790 238110 200230 123670 106300 133350 141710 202820 196670 191690 190710 240590 178390 207200 202760 202860 179410 180280 200280 226930 190310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108800000 13998 1777 13233 26816 21545 21545 1 9606 Homo sapiens 0.04150979212499806 ITTGSSSAGTQSSTSNR Unmodified 1640.7602 0.76017024 2285 B2RAH5;O14974-2;O14974;A0A024RBF1;O14974-5;H0YHI8;A0A3B3ISH4 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A yes no 0 0 0 7 0 1 31.49 31.588 3 0.00052111 5977 20230619_1887_Aki_TMTPro18x_K_F7 81.656 67.993 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13999 2285 13234 26817 21546 21546 1 9606 Homo sapiens -0.03457943411240194 ITTMQLER Oxidation (M) 1006.5117 0.51173046 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 1 0 5 0 1 39.709 39.799 2 0.014132 9428 20230619_1885_Aki_TMTPro18x_K_F5 90.308 53.333 140430 111210 122960 138410 163970 176070 166200 156330 202860 115010 117500 111090 109850 84897 139080 106720 125380 85823 129700 102050 127080 138010 167180 174720 168450 159980 200920 118500 124270 112100 113720 89597 139960 105850 119830 81882 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158220000 14000 3152 13235 26818 21547 21547 1832 1 9606 Homo sapiens 0.008735063288895617 ITTMQLER Unmodified 990.51682 0.51681584 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 6.5 0.5 1 1 46.261 46.345 2 2.0187E-05 11886 20230619_1887_Aki_TMTPro18x_K_F7 137.84 96.818 163360 123940 155850 173400 184190 228420 189890 198340 254810 166820 169600 155740 153410 138360 185890 164640 181680 153170 150930 113900 159520 171690 189560 225970 193070 203800 252230 170150 177280 158100 158730 144650 188090 164470 173670 145710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88967000 14001 3152 13235 26819;26820 21548;21549 21549 2 9606 Homo sapiens 0.021178101914983927 ITVNEVELLVMK Unmodified 1386.7792 0.77923811 179 Q53GN6;A0A024R201;Q9UNM6;B2RBM7;Q9Y6E3;Q9UNM6-2;B4DJ66;Q9UNM7 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 7.5 0.5 1 1 64.547 64.572 3 0.0015858 19757 20230619_1888_Aki_TMTPro18x_K_F8 90.926 59.287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14002 179 13236 26821;26822 21550;21551 21551 2 9606 Homo sapiens 0.10131966416747673 ITVPGNFQGHSGAQCITCSYK Unmodified 2324.0678 0.067785349 315 A0A024R4Z6;Q08945 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 3 0 1 50.887 50.958 3 6.6356E-30 14537 20230619_1882_Aki_TMTPro18x_K_F3 198.98 188.29 127250 90617 109030 123490 89503 124470 117010 113850 117140 161010 137570 154060 169540 145960 111960 201650 173970 202480 117430 83273 112090 121980 95478 125460 116440 118330 120390 159910 141630 156440 169350 153780 118790 201490 166050 192200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 431250000 14003 315 13237 26823 21552 21552 1 9606 Homo sapiens -0.041285831960522046 ITVPLVSEVQIAQLR Unmodified 1664.9825 0.98250603 1556 A0A499FIX8;H7BXI1;A0FGR8-2;A0FGR8;A0FGR8-6;A0FGR8-4 ESYT2 Extended synaptotagmin-2 yes no 0 0 0 3 0 1 63.215 63.245 3 1.4487E-05 19790 20230619_1882_Aki_TMTPro18x_K_F3 109.65 104.33 24499 23068 25705 31629 24733 34104 26284 30685 42845 28914 29292 30598 32889 30047 33262 33495 33810 36431 22684 21178 26040 31252 25893 34194 26927 31531 42130 29405 30859 30973 33492 31191 33848 33769 32362 34561 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68866000 14004 1556 13238 26824 21553 21553 1 9606 Homo sapiens 0.17661407462765055 ITVTSEVPFSK Unmodified 1206.6496 0.64960415 3174 K7ERI7;Q7Z4W8;P35268;K7EJT5;K7EP65;K7EKS7;K7ELC4;K7EMH1 RPL22 60S ribosomal protein L22 yes no 0 0 0 4.5 3.04 1 1 1 1 56.62 56.653 3 5.6798E-05 16392 20230619_1888_Aki_TMTPro18x_K_F8 129.16 112.52 2090000 1689200 1750200 1780600 1768700 2066700 1861400 1921500 2229600 2204100 2016100 1948300 2426900 2010700 1914500 2632200 2154200 2047500 1929900 1547600 1806600 1795400 1840500 2065300 1883300 1980000 2243300 2205200 2095700 1992800 2439400 2104500 1973000 2600500 2058000 1951300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3240299999.9999995 14005 3174 13239 26825;26826;26827;26828 21554;21555;21556 21556 3 9606 Homo sapiens 0.0545453312911377 ITVVGVGQVGMACAISILGK Oxidation (M) 1988.0799 0.079853586 1577 P07195;Q5U077;A0A5F9ZHM4;A0A3B3IS95;A8MW50;C9J7H8;F5H793 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 1 0 5 0 1 63.417 63.463 3 9.4819E-12 19505 20230619_1885_Aki_TMTPro18x_K_F5 138.07 111.53 49935 40237 42980 49461 43502 62347 52807 43340 69816 44558 45887 48563 52556 40224 48749 49034 45332 50727 46116 36917 44308 49336 45554 61595 53183 45661 69126 45166 48518 48832 53220 42255 49452 49229 43443 48143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 273660000 14006 1577 13240 26829 21557 21557 1032 1 9606 Homo sapiens 0.12533685285097818 ITVVGVGQVGMACAISILGK Unmodified 1972.0849 0.084938963 1577 P07195;Q5U077;A0A5F9ZHM4;A0A3B3IS95;A8MW50;C9J7H8;F5H793 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 7 0 1 65.547 65.572 4 5.3561E-11 20318 20230619_1887_Aki_TMTPro18x_K_F7 123.55 108.86 39396 32792 33719 40204 35847 47212 40933 34336 47107 42861 48828 42532 46432 42328 45719 48659 48413 52587 36389 30082 34808 40064 37284 46898 41153 36223 47686 42885 49873 43218 47450 44002 46670 49008 46324 49890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69118000 14007 1577 13240 26830 21558 21558 1 9606 Homo sapiens 0.13777989147729386 IVADKDYSVTANSK Unmodified 1509.7675 0.76748745 1577 P07195;Q5U077;A0A5F9ZHM4;A0A3B3IS95;A8MW50;C9J7H8;F5H793 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 1 7.5 0.5 1 1 46.79 46.858 3 1.3523E-06 12184 20230619_1888_Aki_TMTPro18x_K_F8 125.28 103.72 52976 44367 56424 55248 50779 18770 68585 54933 21619 81767 82814 89431 65157 73720 81064 55882 68935 55063 49019 40706 56902 54482 53227 22702 66715 54410 27327 81247 81423 89777 67884 75521 81338 56516 65978 52359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99690000 14008 1577 13241 26831;26832 21559 21559 1 9606 Homo sapiens 0.03299440927139585 IVADQLCAK Unmodified 1016.5325 0.5324659 2078 P53990-4;P53990;P53990-2;A8K5S3;P53990-5;H3BMU1;P53990-3;B4DLP1;H3BUI0;B4DM80;H3BQF7;J3KR23 IST1 IST1 homolog yes no 0 0 0 7 0 1 49.696 49.781 2 1.7031E-05 13472 20230619_1887_Aki_TMTPro18x_K_F7 169.12 120.84 67947 68773 75288 65147 75567 74025 78434 79456 85923 87358 93991 87292 97502 75790 88265 115170 123010 98237 62978 62905 75800 66296 78450 74381 79185 80987 87453 87845 96163 88324 98956 80648 91972 114060 117190 93576 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71384000 14009 2078 13242 26833 21560 21560 1 9606 Homo sapiens 0.024860967085373886 IVAEEFLK Unmodified 947.53278 0.53278348 2997 F8WCF6;P59998;P59998-3;H7C0A3;R4GN08;P59998-4 ARPC4-TTLL3;ARPC4 Actin-related protein 2/3 complex subunit 4 yes no 0 0 0 5.67 0.471 1 2 60.052 60.111 2;3 0.001572 18179 20230619_1886_Aki_TMTPro18x_K_F6 151.27 130.99 610610 534820 584630 691340 711790 856450 682310 705950 726670 721450 726090 714090 798750 605610 666230 884960 755220 808890 564670 490800 598690 687140 729090 849790 691170 731920 738130 728110 748030 722050 806170 643300 685960 879840 722100 768890 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 833960000 14010 2997 13243 26834;26835;26836 21561;21562;21563 21563 3 9606 Homo sapiens 0.05691839700057244 IVAERPGTNSTGPAPMAPPR Oxidation (M) 2034.0317 0.031657839 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 1 1 4.5 3.5 1 1 38.451 38.444 3 0.0031581 8797 20230619_1888_Aki_TMTPro18x_K_F8 69.94 46.933 46851 37736 52596 50185 52491 51763 57799 56068 64364 63817 63768 57947 61925 56108 55218 63910 56826 63249 43362 34651 52930 49692 54607 52334 58181 57186 65186 63904 65330 59048 62960 58343 56408 64041 54400 60057 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 183190000 14011 2263 13244 26837;26838 21564;21565 21565 1407 2 9606 Homo sapiens 0.05600327689353435 IVAERPGTNSTGPAPMAPPR Unmodified 2018.0367 0.036743217 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 1 1.5 0.5 1 1 42.008 42.047 3 3.4385E-22 10724 20230619_1881_Aki_TMTPro18x_K_F2 174.2 150.16 138780 118850 143150 141100 128690 152810 155450 167150 166120 182380 176760 168360 207570 159090 183040 179380 203460 195070 128390 108990 144840 140880 135600 153940 155600 170100 169180 183020 182150 171250 209580 165630 187650 180830 194420 185140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 373910000 14012 2263 13244 26839;26840 21566;21567 21567 2 9606 Homo sapiens 0.06844631551985003 IVAETMNNYLFGER Unmodified 1655.7977 0.79774172 4471 Q9BYG3;C9J6C5;B4DSM4 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 0 0 0 1 0 1 63.125 63.125 3 0.07257 19749 20230619_1880_Aki_TMTPro18x_K_F1 48.823 35.686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14013 4471 13245 26841 21568 21568 1 9606 Homo sapiens -0.003925236793293152 IVAFENAFER Unmodified 1194.6033 0.60332266 3285 O60763;O60763-2 USO1 General vesicular transport factor p115 yes no 0 0 0 5.5 0.5 1 1 60.798 60.852 2 0.00024204 18459 20230619_1886_Aki_TMTPro18x_K_F6 135.72 106.98 191870 167040 195480 204650 174560 221030 203050 208120 222560 236070 240850 244680 261690 217300 235460 263070 249170 268770 177520 153210 198050 203810 183950 221910 203780 214250 226460 237320 247200 247090 265130 227510 240810 263870 238410 255150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157570000 14014 3285 13246 26842;26843 21569;21570 21570 2 9606 Homo sapiens 0.013805130176933744 IVALNAHTFLR Unmodified 1253.7244 0.72444085 3487;1973 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R299;M0R0P1;A6NHQ2 FBL;FBLL1 rRNA 2'-O-methyltransferase fibrillarin;rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 no no 0 0 0 6 0.816 1 1 1 52.646 52.719 3 3.4105E-17 15103 20230619_1886_Aki_TMTPro18x_K_F6 213.25 169.95 130550 106180 121650 130340 113010 141090 143680 137900 166140 102290 117660 109200 107760 100570 120290 130730 133710 127540 120640 97413 124280 129790 119060 141730 143750 140190 165780 105620 122560 110390 111000 105570 122900 130680 127760 121200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1028099999.9999999 14015 3487;1973 13247 26844;26845;26846 21571;21572 21572 2 9606 Homo sapiens 0.10772760451027352 IVALSSSLSNAK Unmodified 1188.6714 0.67140222 3312 O75643;A4FU77;B4E150;B4E0P5 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 3.5 0.5 1 1 56.158 56.181 3 2.1039E-07 16730 20230619_1883_Aki_TMTPro18x_K_F4 162.21 130 104990 72687 88720 80745 90190 93733 97651 87909 108280 78776 90022 67036 82811 67452 95239 95007 86063 69022 96868 66668 91442 81106 93766 93702 98340 89986 108870 79820 92788 68753 85316 71005 96116 93588 82315 65895 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 417880000 14016 3312 13248 26847;26848 21573 21573 1 9606 Homo sapiens 0.08461337877702135 IVAPISDSPKPPPQR Unmodified 1600.8937 0.89369102 1052 A0A0K0K1K7;O95336;M0R261 PGLS 6-phosphogluconolactonase yes no 0 0 1 2 0 1 45.2 45.281 3 8.031E-08 12263 20230619_1881_Aki_TMTPro18x_K_F2 136.6 108.46 216160 176630 176440 198700 181020 197740 209520 182860 229370 248700 276420 283800 244640 235890 256090 294070 299570 317450 199570 161910 182740 198870 188510 199770 210200 189730 234440 248860 280090 284900 251460 247870 262830 295770 286330 301210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116580000 14017 1052 13249 26849 21574 21574 1 9606 Homo sapiens 0.11727992223063666 IVAPPGGR Unmodified 765.44972 0.44972255 1284;1217;3880;2441 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;B4DLZ4;H0YBT4;A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q8NAN9;B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2 DPYSL3;DPYSL2;CRMP1 Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 1 no no 0 0 0 4.17 2.54 1 1 1 1 1 1 38.452 38.487 2 0.01027 9395 20230619_1880_Aki_TMTPro18x_K_F1 99.279 67.214 2680500 1781300 2467500 2550200 2368700 2569400 2579100 2556800 3227100 3076100 3747400 3711900 3468000 3065200 2975200 2631600 4208900 3757300 2474100 1638300 2523100 2512100 2475000 2596100 2609300 2627500 3270000 3100600 3806900 3715400 3526500 3161200 3099800 2716100 4012000 3558400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3755099999.9999995 14018 1217;1284;2441;3880 13250 26850;26851;26852;26853;26854;26855 21575;21576;21577 21575 3 9606 Homo sapiens 0.05761567762715458 IVASASFDK Unmodified 936.49165 0.49164694 2638 B4E303;B4E074;Q9NVX2;A0A0A0MRH0;K7EN33;Q9NVX2-2 NLE1 Notchless protein homolog 1 yes no 0 0 0 7.5 0.5 1 1 50.44 50.519 2 0.0001897 13751 20230619_1888_Aki_TMTPro18x_K_F8 162.97 118.58 99709 73689 88236 88615 102280 100540 103990 94604 118280 94684 93512 84283 96322 71695 94192 108660 99436 87073 92055 67618 90786 88441 105110 100670 105160 97079 118660 95420 97185 85688 98067 76348 96185 107350 95003 82976 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66694000 14019 2638 13251 26856;26857 21578 21578 1 9606 Homo sapiens 0.0208607866057946 IVATKPLYVALAQR Unmodified 1541.9293 0.92934824 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;A0A024R9E2;Q3ZCS4;Q9H361;Q5VX58;Q2VIP3;H0YB86 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 yes no 0 0 1 7.5 0.5 1 1 56.976 57.03 3 1.3178E-09 16600 20230619_1888_Aki_TMTPro18x_K_F8 168.5 144.11 290600 352640 253840 257730 585510 1004800 210500 432700 700820 36580 22703 36574 42758 30599 48496 35560 34005 39198 269240 321820 266190 277600 576090 945370 249070 469740 657430 60116 55972 37230 43593 32059 48340 35901 32712 37173 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 728420000 14020 566 13252 26858;26859 21579;21580 21580 2 9606 Homo sapiens 0.18006074470758904 IVATLPYIK Unmodified 1016.627 0.62701821 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 0 4 0 1 61.249 61.252 3 0.00013958 18833 20230619_1883_Aki_TMTPro18x_K_F4 114.28 83.711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14021 2484 13253 26860 21581 21581 1 9606 Homo sapiens 0.11936978522180652 IVAVTGAEAQK Unmodified 1085.6081 0.60807369 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 47.58 47.665 3 3.0063E-06 12474 20230619_1887_Aki_TMTPro18x_K_F7 145.99 110.45 287440 226480 290560 279770 282600 313410 324660 316050 351310 358970 410680 474010 412980 362700 389040 402530 429660 461240 265750 207830 294740 278690 295280 314440 325820 323900 358750 363880 419110 471950 420350 379850 398350 407150 410920 437350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 369260000 14022 1637 13254 26861;26862 21582;21583 21582 2 9606 Homo sapiens 0.06869397160448898 IVDAVIK Unmodified 756.47454 0.47454032 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;A0A2R8YF80;B4E0F1;B4DSI8;B3KNW7;A0A2R8Y523;A0A2R8Y5K3;K7EQF0;A0A2R8YFK5;K7EP28;A0A2R8YF38 SMARCA4 Transcription activator BRG1 yes no 0 0 0 7.5 0.5 1 1 54.091 54.16 2 0.035158 15431 20230619_1887_Aki_TMTPro18x_K_F7 92.925 20.691 261620 204450 227400 269150 235130 275410 266270 261620 310770 338040 375590 389840 405090 333250 294740 437250 443830 450170 241580 187740 234240 266500 244720 277660 268100 270340 316770 339070 383540 391590 407310 351160 310670 437980 423260 427420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 134560000 14023 1348 13255 26863;26864 21584;21585 21584 2 9606 Homo sapiens 0.08656202845429561 IVDDLKDEAEQYRK Unmodified 1720.8632 0.86317875 3309 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 2 6 0.816 1 1 1 55.397 55.464 4 0.00040969 16233 20230619_1886_Aki_TMTPro18x_K_F6 94.017 77.523 388020 327760 358210 372320 351990 410760 410490 392140 410820 433380 470850 453240 459370 388210 443460 488540 444840 471290 358630 300440 366390 372960 367830 412050 410600 403070 420960 436310 479710 457170 468370 407880 451570 488250 425790 447720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2257900000 14024 3309 13256 26865;26866;26867 21586 21586 1 9606 Homo sapiens 0.031581690473785784 IVDDWANDGWGLK Unmodified 1487.7045 0.70449327 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2 CANX Calnexin yes no 0 0 0 6 0 1 63.286 63.334 2 2.3199E-15 19613 20230619_1886_Aki_TMTPro18x_K_F6 242.82 206.39 107540 97708 127680 115570 90549 130870 134210 134330 147090 147890 143990 173210 173260 144880 145680 173650 167390 204040 99661 89574 127450 115510 98343 131180 133230 137350 149020 149490 149360 173650 174600 151960 149990 175650 160210 193340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128660000 14025 1700 13257 26868 21587 21587 1 9606 Homo sapiens -0.01985080070244294 IVDNVRPDR Unmodified 1082.5833 0.58325592 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 1 6 0 1 35.933 35.994 3 0.00051266 7941 20230619_1886_Aki_TMTPro18x_K_F6 110.53 54.52 96474 73163 84847 96674 122200 122950 116760 104440 150880 112440 124750 128080 126590 108920 107410 133330 147810 119980 89077 67193 87787 96001 123810 121930 119010 108220 150630 113790 129300 128690 128300 114230 111920 132780 140840 114210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223410000 14026 1002 13258 26869 21588 21588 1 9606 Homo sapiens 0.04526762077762214 IVDPEIALK Unmodified 996.58555 0.58554733 2592 B4DUD5;P33240-2;P33240;E9PID8;E7EWR4;B3V096;A0A0A0MT56 CSTF2 Cleavage stimulation factor subunit 2 yes no 0 0 0 5.5 0.5 1 1 58.315 58.377 2 0.0007638 17447 20230619_1886_Aki_TMTPro18x_K_F6 124.23 51.997 91083 77964 72930 91598 74248 91078 91385 91167 103610 106420 110770 100870 113260 98308 107970 108140 111690 138250 84107 71484 75744 91371 77604 92133 91526 93547 105160 106570 113360 102590 115270 102070 110100 110190 107010 130890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50239000 14027 2592 13259 26870;26871 21589 21589 1 9606 Homo sapiens 0.08711797762839524 IVDQIRPDR Unmodified 1110.6146 0.61455605 1328;3137 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3KRZ1;J3QSF1 DDX17;DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 no no 0 0 1 6.5 0.5 1 1 40.218 40.297 3 0.00026938 9604 20230619_1886_Aki_TMTPro18x_K_F6 126.39 73.704 660640 450340 499550 550630 588770 666510 629440 644580 896210 547190 571440 587880 663130 519110 467750 745820 702450 588220 609000 413450 522540 549370 606640 664580 640180 657320 883910 560210 605390 593150 664730 549640 493520 736180 669040 560780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2794100000 14028 1328;3137 13260 26872;26873 21590;21591 21590 2 9606 Homo sapiens 0.0636733511184957 IVEEERER Unmodified 1058.5356 0.53563702 3080 H6QX63;I3L0U5;Q6PK04 CCDC137 Coiled-coil domain-containing protein 137 yes no 0 0 1 1 0 1 31.164 31.164 3 0.00050896 6434 20230619_1880_Aki_TMTPro18x_K_F1 133.23 84.438 43937 23700 49104 54611 82006 81626 66993 67632 71722 54049 73095 64892 61205 54124 58278 31868 72480 61955 40580 21976 49975 52884 82084 80122 68552 69679 72786 55718 74353 64996 62722 55044 59940 34163 69138 58565 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37322000 14029 3080 13261 26874 21592 21592 1 9606 Homo sapiens 0.008710630869018132 IVEGILK Unmodified 770.49019 0.49019038 1399 A0A8I5KUS5;A0A384MDL3;Q15370;Q15370-2;B8ZZU8;I3L0M9;A0A0B4J296 TCEB2 Transcription elongation factor B polypeptide 2 yes no 0 0 0 8 0 1 56.124 56.181 2 0.0092557 16235 20230619_1888_Aki_TMTPro18x_K_F8 119.57 48.537 453360 550200 623270 523360 649210 639730 716480 558780 515500 493090 512090 268510 381720 213260 862470 238530 204970 201040 421780 503010 618800 532850 672330 636800 712170 574990 536350 495000 519370 281400 414990 223850 828830 239260 202440 191360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70997000 14030 1399 13262 26875 21593 21593 1 9606 Homo sapiens 0.0957648936247324 IVEGISQPIWLVSDTR Unmodified 1811.9781 0.97814893 3920 Q6FGV9;Q15126 PMVK Phosphomevalonate kinase yes no 0 0 0 8 0 1 63.454 63.477 3 2.3324E-14 19313 20230619_1888_Aki_TMTPro18x_K_F8 169.98 152.32 74199 68861 69670 77101 90286 99052 96833 77020 83251 94629 105980 108510 102350 95884 110970 111880 106180 114440 68633 63092 71520 77467 92274 98016 96794 80736 86532 95115 107570 109110 105020 100120 112430 112330 101690 108630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255430000 14031 3920 13263 26876 21594 21594 1 9606 Homo sapiens 0.10463898249167869 IVEGQDAEVGLSPWQVMLFR Oxidation (M) 2289.1464 0.14635325 2771 CON__P00735 yes yes 0 1 0 6.5 0.5 1 1 64.084 64.122 3 1.6085E-16 19702 20230619_1887_Aki_TMTPro18x_K_F7 161.95 152.9 + 12539 9849.3 9427.5 11843 23243 19514 15749 21261 29405 44165 75943 122500 50204 57393 79135 41616 56925 80992 11568 9035.6 10051 11897 22837 19210 16767 22222 31016 45699 74952 118340 53474 60424 78537 44413 54847 76421 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 259620000 14032 2771 13264 26877;26878 21595 21595 1650 1 9606 Homo sapiens 0.053345923807228246 IVEGQDAEVGLSPWQVMLFR Unmodified 2273.1514 0.15143862 2771 CON__P00735 yes yes 0 0 0 8 0 1 65.47 65.489 3 1.8841E-45 20140 20230619_1888_Aki_TMTPro18x_K_F8 262.25 240.69 + 10452 9767.3 10354 13272 12401 17610 13494 14985 16160 39913 61336 97837 38670 51075 67326 39007 45576 74631 9672.2 8966.1 10581 13163 12783 17410 13659 16177 18136 40678 60103 94899 41620 53501 66613 41485 44019 70401 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113330000 14033 2771 13264 26879 21596 21596 1 9606 Homo sapiens 0.06578896243308918 IVEHQNLSK Unmodified 1066.5771 0.57710791 4517 Q9H501 ESF1 ESF1 homolog yes yes 0 0 0 7 0 1 38.153 38.217 3 3.4477E-05 8533 20230619_1887_Aki_TMTPro18x_K_F7 152.04 114.93 52298 30545 59870 57307 77020 80900 62957 70757 71564 62292 82910 83801 79205 66200 70845 44629 85972 77550 48330 28213 60420 55941 78223 79740 64605 72728 72836 64070 84366 83441 80546 67771 72865 47136 82053 73339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43849000 14034 4517 13265 26880 21597 21597 1 9606 Homo sapiens 0.04648243846213518 IVEHQVLMK Oxidation (M) 1111.606 0.6059652 3951 Q16566;B2R747 CAMK4 Calcium/calmodulin-dependent protein kinase type IV yes no 0 1 0 7 0 1 42.707 42.782 3 0.018353 10397 20230619_1887_Aki_TMTPro18x_K_F7 61.56 35.901 79475 71260 79686 83306 72318 61088 72608 83424 94542 79559 90165 84138 86425 73370 78213 91506 95063 83205 73534 65323 80803 82900 75595 64045 73935 83583 94844 80748 92496 84898 87952 76981 80676 91167 90710 79160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46651000 14035 3951 13266 26881 21598 21598 2620 1 9606 Homo sapiens 0.054626451510102925 IVEIPFNSTNK Unmodified 1260.6714 0.67140222 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 3.67 3.09 1 1 1 58.098 58.118 2 1.7855E-08 17726 20230619_1880_Aki_TMTPro18x_K_F1 174.98 147.24 91113 79259 94781 112280 117920 157120 137520 140100 158550 146980 145430 164020 163960 132870 155920 176740 169770 184170 84311 72810 96497 111190 121390 154960 138120 144430 159820 148710 150790 164660 166340 140440 159570 177250 162400 174790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259870000 14036 3387 13267 26882;26883;26884 21599;21600 21599 2 9606 Homo sapiens 0.0514933787769678 IVEMSTSK Oxidation (M) 909.44773 0.44773322 3110 I3L397;I3L504;P63241;P63241-2;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 EIF5A;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2 yes no 0 1 0 5.5 0.5 2 2 40.275 40.366 2;3 0.012272 9645 20230619_1885_Aki_TMTPro18x_K_F5 92.491 43.93 178470 103430 205560 202460 288010 307710 240970 279560 294670 164670 229400 229120 193370 186570 257600 125250 259800 218140 164930 95598 207770 197530 291290 302300 247400 284290 294070 174750 236990 228180 201730 190610 260160 132520 248270 206360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 306870000 14037 3110 13268 26885;26886;26887;26888 21601;21602 21601 1804 2 9606 Homo sapiens -0.010612738280542544 IVEMSTSK Unmodified 893.45282 0.4528186 3110 I3L397;I3L504;P63241;P63241-2;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 EIF5A;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2 yes no 0 0 0 6.5 0.5 1 1 47.149 47.234 3 0.0063025 12683 20230619_1886_Aki_TMTPro18x_K_F6 79.906 30.073 108610 67895 116620 103390 132320 131450 128840 117560 155910 96818 110080 101640 114600 99405 126650 76163 125560 107500 100340 62511 117940 101850 136000 130460 130900 120530 155290 99254 115280 102870 117420 101430 128220 78847 120020 101840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 661060000 14038 3110 13268 26889;26890 21603 21603 1 9606 Homo sapiens 0.0018303003455457656 IVEPYIAWGYPNLK Unmodified 1661.8817 0.88172935 3473;3341 P18124;A0A024R814;A8MUD9;O95036 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 no no 0 0 0 2.5 0.5 1 1 63.719 63.738 3 4.6288E-07 19993 20230619_1882_Aki_TMTPro18x_K_F3 136.38 71.726 258360 222280 247070 216980 195890 235250 251890 232060 242010 292650 223060 221480 280840 231320 230860 306810 253940 271230 238890 203470 250990 220060 209120 236540 250490 238900 246770 290290 232290 228420 282390 242350 237330 304880 242870 257930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1237100000 14039 3473;3341 13269 26891;26892 21604 21604 1 9606 Homo sapiens 0.0772637547991053 IVETEAYLGPEDEAAHSR Unmodified 1985.933 0.93304923 3521 Q1W6H1;P29372-5;P29372-4;P29372-2;P29372;A2IDA3 MPG DNA-3-methyladenine glycosylase yes no 0 0 0 1 0 1 48.388 48.388 3 1.4904E-18 13711 20230619_1880_Aki_TMTPro18x_K_F1 171.56 162.28 13647 11252 12764 15454 13295 13664 17732 14236 17407 14660 17312 15108 17619 14006 16339 16244 20481 17653 12613 10335 13067 15233 13874 13967 17600 14531 17733 14813 17767 15292 17910 14610 16863 16368 19537 16762 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24484000 14040 3521 13270 26893 21605 21605 1 9606 Homo sapiens -0.02047997074646446 IVEVLLMK Oxidation (M) 959.57254 0.5725398 3564 P38159;P38159-2;H3BT71;H0Y6E7;H3BR27;P38159-3;A8K8A6;O75526 RBMX;RBMXL2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA-binding motif protein, X-linked-like-2 yes no 0 1 0 2 0 1 63.144 63.153 3 0.022301 20052 20230619_1881_Aki_TMTPro18x_K_F2 63.565 26.544 85967 48917 49963 87445 92641 74524 72135 57026 86367 72382 85546 71787 79981 78037 92436 100890 100670 116840 79065 45157 54572 84831 92198 75972 74293 59986 87122 72392 87504 73232 82485 81493 94285 101870 96353 110750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104080000 14041 3564 13271 26894 21606 21606 2231 1 9606 Homo sapiens 0.09113643379112091 IVEVLLMK Unmodified 943.57763 0.57762518 3564 P38159;P38159-2;H3BT71;H0Y6E7;H3BR27;P38159-3;A8K8A6;O75526 RBMX;RBMXL2 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA-binding motif protein, X-linked-like-2 yes no 0 0 0 2.5 0.5 1 1 64.148 64.168 2 0.0049534 20443 20230619_1881_Aki_TMTPro18x_K_F2 114.93 64.893 395190 339180 383690 421180 334020 439660 434020 426720 430820 497260 466720 457120 513950 413770 457290 511740 485370 536810 365450 311150 390320 418840 354030 442720 431840 438740 440890 497400 479210 464430 520160 433650 467870 513910 464480 509410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 525680000 14042 3564 13271 26895;26896 21607;21608 21607 2 9606 Homo sapiens 0.10357947241720922 IVEYLVGDGPQNR Unmodified 1458.7467 0.74669243 4483 Q9C0E8-2;Q9C0E8;Q9C0E8-4;B7Z829;B7ZLA9;Q9C0E8-3;B7Z7F5 LNP;KIAA1715 Protein lunapark yes no 0 0 0 6.5 0.5 1 1 60.327 60.378 3 0.00010956 18287 20230619_1886_Aki_TMTPro18x_K_F6 72.659 65.289 64666 46457 55501 58731 52265 58052 54963 61377 71123 63087 67132 72535 76904 59875 66599 80121 69088 88200 59679 42656 57104 58303 54673 58829 55794 62513 71372 63958 69522 72794 77651 63286 68124 80591 66212 83617 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 24920000 14043 4483 13272 26897;26898 21609;21610 21609 2 9606 Homo sapiens 0.035668953381446045 IVFAAGNFWGR Unmodified 1236.6404 0.64037687 1194 A0A140VJQ4;P04181;P04181-2 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes no 0 0 0 7 0 1 62.933 62.966 2 3.9366E-17 19164 20230619_1887_Aki_TMTPro18x_K_F7 194.44 151.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14044 1194 13273 26899 21611 21611 1 9606 Homo sapiens 0.031522293541229374 IVFEDGNINVNK Unmodified 1360.6987 0.69867961 3880;2441 B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 no no 0 0 0 5.5 0.5 1 1 57.197 57.263 3 1.0039E-09 16948 20230619_1886_Aki_TMTPro18x_K_F6 143.97 113.1 238080 194770 200250 212980 157160 174920 157640 164650 170750 255690 296220 266400 296740 260210 284200 297910 297480 307790 219850 178490 205930 213180 166800 179660 159610 171440 178490 253740 297850 269880 302220 270600 290030 299300 284570 292200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 931560000 14045 2441;3880 13274 26900;26901 21612 21612 1 9606 Homo sapiens 0.03275821418083069 IVFENPDPSDGFVLIPDLK Unmodified 2114.0936 0.093572619 1436 A0A384MTI8;Q96C86;Q53G42;A0A3B3ITF0 DCPS m7GpppX diphosphatase yes no 0 0 0 6 1.41 1 1 1 1 1 65.689 65.718 3 1.687E-19 20375 20230619_1887_Aki_TMTPro18x_K_F7 176.46 160.33 68072 46078 59267 66954 59054 79203 77495 70665 76410 89748 93056 93361 90813 80075 83929 105230 96580 109590 62809 42384 61010 66026 61962 78906 77026 73304 78610 89767 94601 94183 92452 84364 86290 105510 92375 103990 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 314690000 14046 1436 13275 26902;26903;26904;26905;26906 21613;21614;21615 21615 3 9606 Homo sapiens 0.08108957589502097 IVFLHNDR Unmodified 1012.5454 0.54541385 1794 A0A8Q3SHT1;A0A8Q3SHX7;Q9BSC4;A0A8Q3SHW5;B4DS83;Q9BSC4-2;Q9BSC4-4;A0A8Q3SHT6;A0A8Q3SHT2;A0A8Q3SHZ5;A0A8Q3SIR1 NOL10 Nucleolar protein 10 yes no 0 0 0 4.5 3.5 1 1 43.853 43.871 3 8.7608E-06 11806 20230619_1880_Aki_TMTPro18x_K_F1 140.09 116.66 40666 30350 39446 37888 43695 47656 45463 43902 46386 48675 47991 42429 53905 39304 48188 53342 49630 45524 37573 27859 40227 37778 45088 47364 45770 45227 47299 48745 49389 43283 54509 41414 49208 52928 47443 43337 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37590000 14047 1794 13276 26907;26908 21616;21617 21616 2 9606 Homo sapiens 0.03964295882940405 IVFNLCPLQTEDDK Unmodified 1690.8236 0.82362212 2710 Q8TEQ6;B7ZLC9;Q58EZ8 GEMIN5 Gem-associated protein 5 yes no 0 0 0 7 0 1 62.767 62.802 3 0.00035477 19081 20230619_1887_Aki_TMTPro18x_K_F7 102.33 91.864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14048 2710 13277 26909 21618 21618 1 9606 Homo sapiens 0.005843257722744966 IVFQEFR Unmodified 937.50215 0.50215205 3549;1719 A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH11;MYH10 Myosin-11;Myosin-10 no no 0 0 0 4.5 3.5 1 1 55.719 55.719 2 0.013493 16713 20230619_1880_Aki_TMTPro18x_K_F1 120.65 97.122 61576 59559 58349 56387 52619 65618 68053 60095 71903 41596 37967 32723 31607 27240 51768 43071 36629 32481 56978 54485 59459 57378 55582 65542 67806 61303 71575 42818 40288 33484 33427 29107 51403 42465 35164 30978 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47189000 14049 1719;3549 13278 26910;26911 21619;21620 21619 2 9606 Homo sapiens 0.030901061056624712 IVFVPGCSIPLTIVK Unmodified 1641.9528 0.9527858 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 64.296 64.342 3 2.5634E-05 20067 20230619_1886_Aki_TMTPro18x_K_F6 100.55 71.204 545450 413530 449030 437470 515910 617900 551400 546770 672740 116410 118170 95695 120510 123810 296190 130760 119970 115150 503390 378980 465180 442420 532350 609370 557190 551950 654520 141210 147720 99571 131550 127060 287450 130970 116460 109550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 370280000 14050 3650 13279 26912;26913 21621;21622;21623 21623 3 9606 Homo sapiens 0.15748752193030668 IVFVTGNAK Unmodified 947.54402 0.54401687 1079 A0A0S2Z3W7;Q9BY32;A0A0S2Z423;Q9BY32-3 ITPA Inosine triphosphate pyrophosphatase yes no 0 0 0 3 0 1 53.513 53.566 2 0.00070524 15745 20230619_1882_Aki_TMTPro18x_K_F3 145.16 93.468 121290 100970 91292 103880 108150 148820 118240 111290 165780 62794 57224 53021 64865 51574 84296 91940 81930 73487 111930 92480 95605 105260 111670 146160 119980 114990 161540 66019 64175 54366 66931 55381 85285 90676 78355 70025 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71642000 14051 1079 13280 26914 21624 21624 1 9606 Homo sapiens 0.06814661794192034 IVGAPMHDLLLWNNATVTTCHSK Oxidation (M) 2593.2781 0.27811248 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TKR5;A0A8V8TKS0;A0A8V8TL46;A0A8V8TMA9 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 1 0 2.5 0.5 1 1 54.83 54.865 4 9.0818E-14 16492 20230619_1881_Aki_TMTPro18x_K_F2 142.99 134.51 62070 47057 60581 69623 61390 72305 71246 65880 68173 77688 77861 71977 77491 60074 69135 84264 73645 88416 57356 43273 61741 68453 63981 72732 71177 68087 70059 77686 79376 72958 78657 63685 70789 84465 70521 83880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91427000 14052 2973 13281 26915;26916 21625;21626 21625 1757 2 9606 Homo sapiens 0.045204544061562046 IVGCSVHK Unmodified 898.46947 0.46947171 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;P07910-4;D3DPI2;G3V5X6;G3V3K6;G3V251;G3V575;G3V555;B4DSU6;B4DMJ1;G3V4M8;G3V2H6;E5RG71;Q86SE5;B3KT61;B3KSX3;Q86SE5-3 HNRNPC;hCG_1641229;RALYL Heterogeneous nuclear ribonucleoproteins C1/C2;RNA-binding Raly-like protein yes no 0 0 0 2 0 1 38.479 38.542 3 0.0036464 9163 20230619_1881_Aki_TMTPro18x_K_F2 98.629 66.019 87390 64267 105340 104850 145050 150380 118930 139760 131590 55126 67501 61008 65844 47332 92809 44123 75159 46027 80894 59179 106100 103090 146700 148290 121840 141160 130560 60534 72231 61273 68489 49144 92639 44670 71881 43803 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34460000 14053 2226 13282 26917 21627 21627 1 9606 Homo sapiens 0.016175757111682287 IVGLDQVTGMTETAFGSAYK Unmodified 2087.0245 0.024506776 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4;A5XEH4 MYH10 Myosin-10 yes no 0 0 0 1.5 0.5 1 1 64.123 64.127 3 0.013358 20430 20230619_1881_Aki_TMTPro18x_K_F2 51.524 41.994 6385.3 4331.7 6219.5 5803.5 5631.4 6806.4 5155.8 6334.4 7066.9 5314.9 7429.3 7168.6 8549.7 7008.1 8790 7728.4 6233.7 7775.2 5896.8 3980.7 6319.4 5753.7 5892.4 6792.8 5292.4 6474.3 7098.5 5486.6 7654.5 7195.1 8695.7 7272.1 8787.7 7761.8 5999.7 7378.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69867000 14054 3549 13283 26918;26919 21628 21628 1 9606 Homo sapiens 0.024475502983023034 IVGLTEK Unmodified 758.4538 0.45380487 3350 Q59HG1;O95239;O95239-2;Q6PKB2;B4DYE2;Q2VIQ3 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 0 0 8 0 1 50.878 50.955 2 0.018279 13924 20230619_1888_Aki_TMTPro18x_K_F8 102.77 17.414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14055 3350 13284 26920 21629 21629 1 9606 Homo sapiens 0.06491612465754315 IVGPSGAAVPCK Unmodified 1154.6118 0.61177885 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 0 2.5 1.12 1 1 1 1 48.226 48.274 3 0.0014604 13575 20230619_1881_Aki_TMTPro18x_K_F2 83.397 56.794 211060 155850 215620 234870 258760 280190 269710 254290 302780 275890 346460 322170 330660 263340 290200 301770 397520 361660 195080 143370 219440 231170 265600 279210 272310 262190 308140 279120 352510 323080 336020 275780 301770 305950 379050 343000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 595980000 14056 3484 13285 26921;26922;26923;26924 21630 21630 1 9606 Homo sapiens 0.04065743662681598 IVGWYHTGPK Unmodified 1156.6029 0.60292873 2310 B2RD27;P51665;B4DXI8;H3BNT7;H3BTM8 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes no 0 0 0 3.5 0.5 1 1 48.577 48.636 3 0.00037964 13381 20230619_1883_Aki_TMTPro18x_K_F4 108.67 89.009 342200 223270 326640 374100 350570 387350 365610 391530 402810 350750 354380 309780 401130 284310 321100 387750 398340 377070 315900 205780 333750 365320 362700 390540 369010 398550 406300 355470 367560 315810 403810 299900 332540 387170 380240 358340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 324900000 14057 2310 13286 26925;26926 21631 21631 1 9606 Homo sapiens 0.030891380885123 IVGYFVSGCDPSIMGIGPVPAISGALK Unmodified 2704.3968 0.39683063 2292 B2RB23;P42765;A0A0B4J2A4;B3KNP8;K7EME0 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes no 0 0 0 5 0 1 66.091 66.134 4 0.0022496 20633 20230619_1885_Aki_TMTPro18x_K_F5 68.552 54.092 9913.4 8641.5 9344 6668.9 12946 7404 8909.4 10054 11901 10596 14057 9931.6 9781.1 12288 11410 12259 13764 11645 9166.1 7896.7 9566 6927.1 13006 7520.7 9317.4 10094 12034 10664 14106 10213 10225 12578 11708 12285 13132 11075 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36057000 14058 2292 13287 26927 21632 21632 1 9606 Homo sapiens 0.1128080859111833 IVGYVLAK Unmodified 861.53239 0.53238955 3575 P41227-2;P41227;B7Z9N2;Q6P4J0;F8W808;B4DKJ7;A8MWP7;Q9BSU3 NAA10;ARD1A;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 0 0 0 4 0 1 59.72 59.722 3 0.0083821 18202 20230619_1883_Aki_TMTPro18x_K_F4 70.912 41.103 76692 65135 69622 73774 61467 72515 74913 68800 82659 76111 70251 53346 62972 54531 70526 78016 66760 60904 70878 59703 71220 73798 64908 73350 74991 70760 83266 75863 72252 55308 64870 57446 71418 77044 63871 58050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95933000 14059 3575 13288 26928 21633 21633 1 9606 Homo sapiens 0.09608464770849423 IVHDLISR Unmodified 951.55016 0.55016488 4399 Q96T76;Q96T76-8;Q96T76-5;Q5T454;Q96T76-7;B0QZ77 MMS19 MMS19 nucleotide excision repair protein homolog yes no 0 0 0 8 0 1 44.985 45.013 3 3.5823E-05 11473 20230619_1888_Aki_TMTPro18x_K_F8 161.02 148.52 52938 37910 47799 50788 41572 53828 46228 47116 56476 62277 58353 55069 69792 56844 55202 63295 63064 57449 48873 34830 48911 50260 43892 54023 46683 49003 57081 61917 60246 56295 70157 58931 56864 63161 60225 54648 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144270000 14060 4399 13289 26929 21634 21634 1 9606 Homo sapiens 0.07245180025722675 IVHELNTTVPTASFAGK Unmodified 1783.9468 0.9468488 3980 Q4VC31;C9JQ41;H7C525 CCDC58 Coiled-coil domain-containing protein 58 yes no 0 0 0 1.5 0.5 1 1 53.621 53.635 3 0.012659 16032 20230619_1881_Aki_TMTPro18x_K_F2 59.513 53.907 108170 88016 96260 123670 102070 102560 111930 125480 136540 129290 115860 125080 139690 112500 119600 153840 158850 174330 99927 80867 99014 121650 105810 105840 113070 126700 136940 130310 120950 126760 140880 118730 124320 154940 151710 165310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 878500000 14061 3980 13290 26930;26931 21635 21635 1 9606 Homo sapiens 0.08623325215057775 IVHINSIPTNEK Unmodified 1363.746 0.74596415 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;H0Y9Y3;Q9UMS6;Q9UMS6-3 SYNPO2 Synaptopodin-2 yes no 0 0 0 8 0 1 45.989 46.027 3 0.0012234 11899 20230619_1888_Aki_TMTPro18x_K_F8 85.973 70.586 59213 46290 55822 59921 57827 73200 72747 72897 69935 74795 69496 62415 75354 60879 64221 72703 71365 67868 54712 42499 57067 59565 60362 72968 72396 74516 71430 75098 71534 63898 76172 63498 65939 72580 68188 64525 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109730000 14062 4686 13291 26932 21636 21636 1 9606 Homo sapiens 0.07864100689084808 IVHLQETCDLGK Unmodified 1411.7129 0.71294946 2141 A8K9T8;Q9BYT8;B3KU23;E9PCB6;Q9BQD0 NLN Neurolysin, mitochondrial yes no 0 0 0 5.5 0.5 1 1 47.514 47.593 3 1.5695E-13 12816 20230619_1886_Aki_TMTPro18x_K_F6 210.64 203.58 210570 143620 188340 195690 211250 228610 228480 222360 257160 261770 266630 263630 305000 249100 241140 313360 310950 295010 194340 132010 193570 193760 218110 228500 230250 228630 260840 262520 274720 267160 307030 260860 250570 312630 296730 280460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1261100000 14063 2141 13292 26933;26934 21637 21637 1 9606 Homo sapiens 0.023561505747238698 IVHSLDYYNTCEYPNEDEMPNR Oxidation (M) 2774.1588 0.15884478 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1 SRRT Serrate RNA effector molecule homolog yes no 0 1 0 2.5 0.5 1 1 49.988 50.053 3 0.041166 14490 20230619_1881_Aki_TMTPro18x_K_F2 40.137 37.913 16731 13324 14638 16045 16460 15845 13366 14795 13405 22215 18164 16180 18899 14914 14846 21851 18830 19662 15452 12223 15072 15978 16856 16025 13674 15380 13896 21853 18426 16660 19066 15802 15427 21701 17984 18696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64072000 14064 4464 13293 26935;26936 21638 21638 2778 1 9606 Homo sapiens -0.15726828799870418 IVIFTQGR Unmodified 932.54435 0.54435122 1168 Q86U79;A0A140VJE0;P55263-2;P55263;P55263-3;A0A5K1VW54;A0A5K1VW94;P55263-4;A0A5F9ZHJ1 ADK Adenosine kinase yes no 0 0 0 4.5 0.5 1 1 53.097 53.143 2 0.0086978 15430 20230619_1883_Aki_TMTPro18x_K_F4 103.91 90.91 603560 523370 553960 598610 551850 688150 612480 595450 723640 681110 693370 664550 720620 637010 696760 742290 746970 735870 557920 479720 567190 599570 575900 686880 617510 617070 729700 683530 713890 674640 733680 663510 711950 743810 714140 699040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 298950000 14065 1168 13294 26937;26938 21639;21640 21639 2 9606 Homo sapiens 0.07538081514042005 IVIGMDVAASEFYR Oxidation (M) 1585.781 0.78102903 3418 Q6FHV6;P09104;A8K3B0;P09104-2;F5H0C8;U3KQP4 ENO2 Gamma-enolase;Enolase yes no 0 1 0 6.5 0.5 1 1 59.97 60.024 2;3 0.0051621 17817 20230619_1887_Aki_TMTPro18x_K_F7 61.082 34.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14066 3418 13295 26939;26940 21641;21642 21642 2033 2 9606 Homo sapiens 0.011569754346965055 IVIGYQSHADTATK Unmodified 1502.7729 0.77290718 3393 P06730;P06730-2;Q32Q75;X5D7E3;D6RBW1;P06730-3 EIF4E Eukaryotic translation initiation factor 4E yes no 0 0 0 7.5 0.5 1 1 44.728 44.785 3 6.8449E-37 11370 20230619_1888_Aki_TMTPro18x_K_F8 268.59 238.65 197900 157570 168000 180690 183220 196170 197850 196080 198470 241670 234790 228260 262920 205740 194490 275880 271590 238610 182730 144480 173450 180830 189490 197260 198710 201520 203870 241300 240310 231640 264130 216720 203670 273780 258880 227140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1583299999.9999998 14067 3393 13296 26941;26942 21643 21643 1 9606 Homo sapiens 0.04163164509600392 IVILEYQPSK Unmodified 1188.6754 0.67542497 3931 Q15393;A8K6V3;Q15393-2;J3QL37;J3QRB2 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 3 2.92 2 1 1 59.803 59.815 2;3 2.1245E-05 18383 20230619_1880_Aki_TMTPro18x_K_F1 182.76 142.5 244350 202240 222940 270070 231340 272250 270480 264370 278070 284720 297270 311520 305120 279520 312030 333400 318760 357630 225800 185690 228700 267100 240820 274880 270700 271250 283680 287450 304630 313980 311620 292170 317670 335470 305190 339280 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 456530000 14068 3931 13297 26943;26944;26945;26946 21644;21645;21646;21647;21648 21644 5 9606 Homo sapiens 0.08863427371397847 IVILPDYLEIAR Unmodified 1413.8232 0.82315184 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 8 0 1 64.222 64.243 2 9.0641E-18 19648 20230619_1888_Aki_TMTPro18x_K_F8 235.66 128.07 185850 154640 169480 189630 166440 204060 199150 205680 211670 220710 228950 240810 244660 222640 242220 243430 234880 274530 171750 141860 173640 188830 174190 205240 199340 210400 215680 222840 234920 242910 249150 231330 245960 246040 225080 260270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 264390000 14069 1213 13298 26947 21649 21649 1 9606 Homo sapiens 0.13279318905415494 IVIVPSLNPDGR Unmodified 1278.7296 0.7295858 3324 O75976;O75976-2 CPD Carboxypeptidase D yes no 0 0 0 1 0 1 59.167 59.167 2 0.0022903 18154 20230619_1880_Aki_TMTPro18x_K_F1 96.665 59.644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14070 3324 13299 26948 21650 21650 1 9606 Homo sapiens 0.10137019522994706 IVKPAEIPELK Unmodified 1235.7489 0.74892426 879 A0A087X0M4;A0A8Q3WKX9;Q9BWU0;A0A087WWF4;A0A8Q3WLG9;B4DV74;A0A8Q3WKX3 SLC4A1AP Kanadaptin yes no 0 0 1 1 0 1 54.541 54.541 3 0.038459 16238 20230619_1880_Aki_TMTPro18x_K_F1 55.04 38.015 157710 132640 147640 152250 146480 165650 163230 155100 182380 168680 176150 141830 158600 135200 174870 173520 154270 132640 145780 121600 150830 152360 152760 166270 164220 159560 184420 168980 180070 145130 163170 141660 176390 171500 147660 126500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139160000 14071 879 13300 26949 21651 21651 1 9606 Homo sapiens 0.1404797581387811 IVLAAQAISR Unmodified 1040.6342 0.63422886 2898;4664 E7ERK9;Q9UI10;Q9Y3W7;Q9UI10-3;Q9UI10-2;Q71US4 EIF2B4;DKFZp586J0119 Translation initiation factor eIF-2B subunit delta no no 0 0 0 4.5 0.5 1 1 53.367 53.413 2 0.0091181 15228 20230619_1885_Aki_TMTPro18x_K_F5 91.087 46.334 113150 103300 101670 117560 119060 146060 128570 112700 148640 104470 108110 98829 111530 91552 114120 103700 113940 91613 104610 94666 104620 117900 122710 144750 129630 117280 148550 105990 112940 100380 113840 95324 115920 103400 108870 87224 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75155000 14072 2898;4664 13301 26950;26951 21652 21652 1 9606 Homo sapiens 0.11553711122587629 IVLANDPDADRLAVAEK Unmodified 1808.9632 0.96322715 4351 Q96G03;B4DN40;Q96G03-2 PGM2 Phosphoglucomutase-2 yes no 0 0 1 5 0 1 53.744 53.814 3 0.00066378 15394 20230619_1885_Aki_TMTPro18x_K_F5 81.157 40.58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14073 4351 13302 26952 21653 21653 1 9606 Homo sapiens 0.09110406381159919 IVLDNSVFSEHR Unmodified 1414.7205 0.72047768 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;A0A087WX41;P53675-2;P53675 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 0 6 0 1 51.655 51.732 3 9.919100000000002E-41 14633 20230619_1886_Aki_TMTPro18x_K_F6 242.94 222.55 47919 43244 47499 48448 52350 56301 52403 55088 60432 51538 47554 47041 46628 36335 43385 48743 46732 50853 44335 39625 48362 48621 53990 56322 53089 56251 60594 52145 49354 47595 47450 38516 44390 48882 44709 48263 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233860000 14074 826 13303 26953 21654 21654 1 9606 Homo sapiens 0.029706261666660794 IVLDSDAAEYGGHQR Unmodified 1629.7747 0.7746981 3792 Q04446;B4DNJ3;E9PGM4;B4DUF1;Q59ET0 GBE1 1,4-alpha-glucan-branching enzyme yes no 0 0 0 3 0 1 44.047 44.117 3 0.071313 11453 20230619_1882_Aki_TMTPro18x_K_F3 39.531 33.751 173040 164380 168150 168880 191170 186500 191590 198100 209750 179790 199090 211590 223990 198480 229120 223690 203400 195470 160130 150480 171540 170540 196570 187660 193750 201080 212180 183690 206010 212970 228080 206390 231440 222870 194810 185990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133570000 14075 3792 13304 26954 21655 21655 1 9606 Homo sapiens -0.014998264724454202 IVLEDGTLHVTEGSGR Unmodified 1681.8635 0.8635131 1284 A0A1C7CYX9;Q59GB4;Q16555;Q16555-2;Q8NAN9 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 0 0 0 6 0 1 50.169 50.246 3 9.48E-12 14030 20230619_1886_Aki_TMTPro18x_K_F6 166.35 145.12 42119 33142 36060 43491 39333 39486 48363 42031 50430 48005 53052 50673 48462 43661 51104 52816 50629 58102 38890 30431 37231 43010 40814 40300 48284 42954 51344 48278 54103 51098 49744 45750 51906 53219 48497 55102 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40539000 14076 1284 13305 26955 21656 21656 1 9606 Homo sapiens 0.04985588767226545 IVLELPQ Unmodified 810.48511 0.485105 3992 Q53FA7;B4DMQ7 TP53I3 Quinone oxidoreductase PIG3 yes no 0 0 0 5 0.816 1 1 1 63.57 63.604 2 0.013544 19567 20230619_1885_Aki_TMTPro18x_K_F5 113.82 100.69 141660 98777 104700 117640 125720 143780 99966 110270 149910 136720 156410 195710 165920 131820 168070 153050 159820 182830 130580 90653 109800 117570 128490 142650 103890 115690 150150 138570 160870 193660 169050 139240 170330 155180 153150 173260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 367630000 14077 3992 13306 26956;26957;26958 21657;21658;21659 21658 3 9606 Homo sapiens 0.07228185499855044 IVLENSSR Unmodified 916.49779 0.49779495 1941 Q92556;A4D1X5;B4DJV6;Q92556-3;B4DZ20;Q96JJ3;Q96JJ3-3;B4DRL5;Q5JVZ5;H7C0S6;B7Z1S8;H0YCM7;H7C3P3;Q5JVZ8 ELMO1;ELMO2 Engulfment and cell motility protein 1;Engulfment and cell motility protein 2 yes no 0 0 0 5.5 0.5 1 1 41.003 41.094 2 0.0017531 9974 20230619_1885_Aki_TMTPro18x_K_F5 137.62 63.436 107810 71862 96405 72385 124370 144950 123850 132380 189260 164370 160340 143710 168040 132950 130410 177390 187160 167760 99488 65867 99178 74100 127170 140770 126880 136780 187930 163870 166020 146540 169480 139910 136660 176860 178390 159520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127730000 14078 1941 13307 26959;26960 21660 21660 1 9606 Homo sapiens 0.03620596892096728 IVLHSLDLR Unmodified 1064.6342 0.63422886 454 A0A024R7I5;Q9NXH9-2;Q9NXH9;A8K8L2;K7EQQ8;A0A024R7G3;B4DHS5;K7EJX9;B4E3A3 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes no 0 0 0 1 0 1 50.702 50.702 3 7.8514E-08 14642 20230619_1880_Aki_TMTPro18x_K_F1 155.58 110.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14079 454 13308 26961 21661 21661 1 9606 Homo sapiens 0.10449711122601002 IVLLDSSLEYK Unmodified 1278.7071 0.70711903 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2;Q5SZX6 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 7 0.816 2 2 2 62.595 62.632 2;3 3.2447E-13 18984 20230619_1887_Aki_TMTPro18x_K_F7 251.53 155.27 1060800 1003700 1012100 1125900 944170 1082700 1045100 1056900 1140500 1400500 1323300 1397700 1465700 1235400 1303400 1563300 1443200 1628500 981470 919610 1031800 1126700 989250 1097900 1051400 1090900 1165300 1396400 1355900 1413300 1483600 1297300 1337400 1568500 1380800 1545400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 6469999999.999999 14080 2435 13309 26962;26963;26964;26965;26966;26967 21662;21663;21664 21663 3 9606 Homo sapiens 0.07891375334702388 IVLTNPVCTEVGEK Unmodified 1557.8072 0.80724378 3571 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 6 0.816 1 1 1 57.112 57.174 3 8.246E-09 16925 20230619_1886_Aki_TMTPro18x_K_F6 157.2 139.39 240730 199890 228440 252660 192810 241520 241620 235760 261480 304640 300290 298750 322260 259000 303390 352850 316600 352950 222520 183430 232720 250660 204650 244890 241500 243160 267020 303920 307250 302280 327190 273540 309860 352910 303050 335100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 870960000 14081 3571 13310 26968;26969;26970 21665;21666 21665 2 9606 Homo sapiens 0.05065244606203123 IVLVDDSIVR Unmodified 1127.655 0.65502388 2042 Q53H22;A8K4H7;Q06203;Q59G63 PPAT Amidophosphoribosyltransferase yes no 0 0 0 5 0 1 57.67 57.729 2 5.8866E-07 17006 20230619_1885_Aki_TMTPro18x_K_F5 185.72 131.11 52142 56723 60772 44587 43150 50801 53969 42950 47572 51951 49182 52004 52864 40899 97123 54144 50730 53867 48380 51804 60654 46203 46479 50779 53614 44696 48922 52015 50677 52399 55863 43276 95184 54320 49009 51155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60311000 14082 2042 13311 26971 21667 21667 1 9606 Homo sapiens 0.09630256711625407 IVNDDQSFYADIYMEDGLIK Oxidation (M) 2364.0831 0.083143867 1284;1217;4185 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;D6RF19;A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;A9CQZ4;E5RFU4;A9CQZ2;Q86U75 DPYSL3;DPYSL2 Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 2 no no 0 1 0 4 0 1 63.621 63.629 3 0.0069917 19830 20230619_1883_Aki_TMTPro18x_K_F4 58.339 45.784 20572 18023 25040 26580 18750 20556 24523 21338 19601 24915 26865 26357 31148 24886 24206 30825 27791 33906 19065 16564 24980 26054 20097 21258 24254 21866 20557 25020 27404 26655 31310 26047 24973 31030 26598 32149 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25833000 14083 1217;1284;4185 13312 26972 21668 21668 753 1 9606 Homo sapiens -0.044334379178053496 IVNEGGIDPLLR Unmodified 1294.7245 0.72450043 4302 Q92626 PXDN Peroxidasin homolog yes yes 0 0 0 4.5 0.5 1 1 57.735 57.766 2 0.035881 17007 20230619_1885_Aki_TMTPro18x_K_F5 83.081 56.119 29996 27907 29470 30966 35943 33741 38864 43346 42485 38070 32249 35769 36773 30585 38066 32782 37484 35777 27756 25566 30085 31081 36851 34149 39127 43451 42682 38676 33806 36216 37448 31849 38621 33096 35859 33955 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68997000 14084 4302 13313 26973;26974 21669 21669 1 9606 Homo sapiens 0.08892715660363137 IVNESHLDK Unmodified 1053.5455 0.54547343 13 A0A024QYV8;B4DTZ1;O43303-2;O43303 CP110;CCP110 Centriolar coiled-coil protein of 110 kDa yes no 0 0 0 4 0 1 40.598 40.64 3 0.014757 9810 20230619_1883_Aki_TMTPro18x_K_F4 72.2 37.668 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14085 13 13314 26975 21670 21670 1 9606 Homo sapiens 0.020842510922648216 IVNFLLQHSAK Unmodified 1268.7241 0.7241065 3033 Q59G01;H0Y9E9;Q12955-7;Q12955-5;Q12955-4;Q12955 ANK3 Ankyrin-3 yes no 0 0 0 6 0 1 61.399 61.453 3 0.002249 18763 20230619_1886_Aki_TMTPro18x_K_F6 78.692 59.085 34210 31882 35547 31787 35940 42462 49337 51036 62681 28305 30198 25545 27620 25125 30243 29747 31380 26407 31671 29181 35999 32292 37691 42321 49346 50910 61672 29796 32375 26088 28426 26166 30766 29638 29979 25135 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100770000 14086 3033 13315 26976 21671 21671 1 9606 Homo sapiens 0.10049340731166012 IVNHWASPELR Unmodified 1320.6939 0.693869 1533 A0A3F2YNX0;A0A3F2YNZ0;F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5;A0A8I5KPG1 SEC16A Protein transport protein Sec16A yes no 0 0 0 8 0 1 46.057 46.096 3 7.682E-05 11935 20230619_1888_Aki_TMTPro18x_K_F8 123.01 105.14 27398 24861 26752 26281 27423 29672 31250 31404 45331 28852 26750 26191 28668 25229 28867 30828 28227 31864 25347 22768 27238 26489 28555 29798 31705 31888 44596 29251 28402 26687 29222 26355 29327 30941 27039 30240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22596000 14087 1533 13316 26977 21672 21672 1 9606 Homo sapiens 0.04634982065977056 IVNQPSSLFGSK Unmodified 1275.6823 0.68230126 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 3 0 1 55.83 55.871 3 0.0074161 16728 20230619_1882_Aki_TMTPro18x_K_F3 69.03 54.773 81007 68526 74346 83327 66866 82035 71584 77256 85835 92513 93385 85866 86459 79108 90994 98251 92779 95954 74869 62854 76018 82916 70278 82934 72398 79662 86974 92470 95117 87275 88711 82819 92592 98279 88775 91150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59217000 14088 594 13317 26978 21673 21673 1 9606 Homo sapiens 0.055487402519929674 IVNTPQGCLWYK Unmodified 1477.7388 0.73877028 3269 O43847;O43847-2;Q96L67;B4DRI0;Q6UUU9;G3V1R5;B4DYV0 NRD1 Nardilysin yes no 0 0 0 4 0 1 58.726 58.728 3 6.7225E-06 17758 20230619_1883_Aki_TMTPro18x_K_F4 138.94 102.09 67786 60100 69175 65668 64135 80807 71046 75032 79981 75100 69521 66867 76267 63263 72115 80393 78123 70075 62723 55061 70068 66094 67283 80422 71539 77024 80577 75657 72109 68160 77428 66283 73778 79917 74634 66696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113120000 14089 3269 13318 26979 21674 21674 1 9606 Homo sapiens 0.019010448169865413 IVPEWQDYDQEIK Unmodified 1661.7937 0.7937022 2154 A8KAK1;Q9NYU2-2;Q9NYU2;H7BZG0 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 3.5 0.5 1 1 61.646 61.663 3 0.00011143 19026 20230619_1883_Aki_TMTPro18x_K_F4 98.942 75.935 40195 35105 42478 40154 38639 46647 44572 42458 45828 45507 47795 53513 52188 47913 50719 54436 51064 54141 37200 32177 42894 40238 40615 46579 44649 43755 46703 46074 49188 53763 53076 49929 51641 54577 48876 51415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121960000 14090 2154 13319 26980;26981 21675 21675 1 9606 Homo sapiens -0.010722899013899223 IVPGQFLAVDPK Unmodified 1282.7285 0.72852317 3931 Q15393;A8K6V3;Q15393-2 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 1.5 0.5 1 1 61.835 61.84 3 0.00024205 19397 20230619_1881_Aki_TMTPro18x_K_F2 96.64 79.7 149810 130920 145730 160930 147400 160480 161410 157010 165200 164080 175150 156320 195390 191790 181670 180190 182700 217020 138550 120080 148490 160050 153310 162250 162090 160870 168510 165280 180020 160350 198270 196030 185040 183350 175030 205610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 331500000 14091 3931 13320 26982;26983 21676 21676 1 9606 Homo sapiens 0.098468051540749 IVPNVLLEQGK Unmodified 1208.7129 0.71287311 651 O75390;A0A024RB75;B4DJV2;B3KTN4;A0A0C4DGI3;H0YIC4;Q0QEL2 CS Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 3.67 3.09 1 1 1 60.481 60.496 3 3.1391E-05 18658 20230619_1880_Aki_TMTPro18x_K_F1 136.96 106.39 177510 161640 195150 195890 197550 216090 230190 220820 238840 217870 222320 186490 227730 176120 228040 238060 226840 212320 164390 148220 196830 195330 205770 217100 230470 225180 242130 219420 228930 190610 232150 185370 231870 236770 216950 201990 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 803150000 14092 651 13321 26984;26985;26986 21677;21678;21679 21677 3 9606 Homo sapiens 0.11686518637020527 IVPPWAPPK Unmodified 1003.5855 0.58548775 812 A0A0G2JMS5;A0A087WU62;A0A087X2D5;B4DEF8;Q9BRJ2 MRPL45 39S ribosomal protein L45, mitochondrial yes no 0 0 0 4 0 1 58.866 58.868 2 0.00060873 17848 20230619_1883_Aki_TMTPro18x_K_F4 108.09 64.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14093 812 13322 26987 21680 21680 1 9606 Homo sapiens 0.08383842553507748 IVQAEGEAEAAK Unmodified 1214.6143 0.61428128 4405 Q99623;F5GY37;F5H3X6 PHB2 Prohibitin-2 yes no 0 0 0 1.75 0.829 2 1 1 46.397 46.45 2;3 3.0785E-13 12777 20230619_1881_Aki_TMTPro18x_K_F2 166.7 148.69 571310 400020 532120 586060 721910 787300 720910 743740 913580 674930 778030 792070 833950 729270 733570 599040 854570 768330 527500 367930 547060 578930 735090 779560 732630 760740 913640 689910 807100 796330 844840 747570 753550 614150 815880 728290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2153800000 14094 4405 13323 26988;26989;26990;26991 21681;21682;21683;21684 21682 4 9606 Homo sapiens 0.015558706013280243 IVQLLGQNEVDYR Unmodified 1545.8151 0.81510635 1357 A0A2R8Y653;Q9BZX2;B4DGD3 UCK2 Uridine-cytidine kinase 2 yes no 0 0 0 6.5 0.5 1 1 60.571 60.621 3 1.1194E-06 18067 20230619_1887_Aki_TMTPro18x_K_F7 141.58 121.2 135910 111200 119740 132610 125530 143180 139050 141760 145510 199660 218870 215170 212560 184800 172120 233330 254330 268100 125550 101990 123150 132320 130360 143960 139700 146450 150980 199030 220750 216740 215300 194230 180620 235430 242640 254220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285700000 14095 1357 13324 26992;26993 21685 21685 1 9606 Homo sapiens 0.06403139917983935 IVQMTEAEVR Unmodified 1174.6016 0.6016081 3705 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;H0Y3Y6;C9JP48;C9J9S3;A0A8V8TR83 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes no 0 0 0 3 0 1 50.363 50.438 2 0.00028378 14314 20230619_1882_Aki_TMTPro18x_K_F3 116.13 76.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14096 3705 13325 26994 21686 21686 1 9606 Homo sapiens 0.02129135937434512 IVQTYHVNMAGTNPYTTITPQEINGK Unmodified 2889.4331 0.43309279 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;B4DFY0;B3KUX9;B7Z2W3;H7C5W8 ACTN1 Alpha-actinin-1 yes no 0 0 0 8 0 1 57.821 57.873 4 5.837E-09 16930 20230619_1888_Aki_TMTPro18x_K_F8 114.2 105.12 32529 24703 29932 31698 24585 33951 36041 33192 36459 42704 39437 40842 47303 36948 35343 50042 41108 45202 30046 22680 30565 31466 26318 34124 35687 34221 37272 42581 40667 41420 47438 38944 36551 49762 39305 42970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79383000 14097 387 13326 26995 21687 21687 1 9606 Homo sapiens 0.06395357021574455 IVQVALNGLENILR Unmodified 1550.9144 0.91442646 2495;3632 B4DII5;B4DWX3;O60684;Q5BKZ2;P52294;B3KXZ2;B3KWR2 KPNA6;KPNA1 Importin subunit alpha;Importin subunit alpha-7;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed no no 0 0 0 5 0 1 67.473 67.515 3 3.142E-05 21175 20230619_1885_Aki_TMTPro18x_K_F5 107.99 82.52 3931.2 3454.1 5593.4 2471.8 4251.2 4511.1 4181.4 5447 4701.3 3001.5 5047.5 4278.1 4901.2 3094.7 4547.5 5739.4 2701.9 2290.4 3649.5 3154.9 5503.5 2616.4 4514.6 4431.6 4244.8 5427.3 4764.8 3202.9 5150.7 4257.2 4979.5 3368.3 4535.7 5529.6 2600.1 2213.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1507400 14098 2495;3632 13327 26996 21688 21688 1 9606 Homo sapiens 0.16100582602734903 IVSAQSLAEDDVE Unmodified 1374.6515 0.65145464 269 A0A024R3W2;Q15388 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes no 0 0 0 2 0 1 58.738 58.752 2 0.0017849 18106 20230619_1881_Aki_TMTPro18x_K_F2 96.342 85.191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14099 269 13328 26997 21689 21689 1 9606 Homo sapiens -0.020885026435962573 IVSGNLR Unmodified 757.44464 0.44463717 1248 Q16851-2;A0A140VKE1;A0A7I2YQ74;Q16851;E7EUC7;B4DUP2;B2RAN1;D6W5E6 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes no 0 0 0 1 0 1 39.693 39.693 2 0.083955 9945 20230619_1880_Aki_TMTPro18x_K_F1 68.312 27.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14100 1248 13329 26998 21690 21690 1 9606 Homo sapiens 0.056212639000818854 IVSLPECFNSPYGAK Unmodified 1680.8181 0.81814282 4576 V9HW91;Q9NQR4;H7C579;B4DFB1;B7Z3F9;F8WF70 HEL-S-8a;NIT2 Omega-amidase NIT2 yes no 0 0 0 2 0 1 61.402 61.413 3 5.0814E-08 19239 20230619_1881_Aki_TMTPro18x_K_F2 109.84 93.094 68957 71976 89238 87042 83861 88039 81148 87816 77344 91991 83344 86403 77767 71165 83627 99644 90342 104710 64028 65970 88854 86704 87343 88969 81943 89829 79354 92520 85036 87457 79869 75414 85402 99899 86473 99348 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 814080000 14101 4576 13330 26999 21691 21691 1 9606 Homo sapiens 0.004966469804685403 IVSQLLTLMDGLK Unmodified 1429.8214 0.82143728 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;A0A7I2V2Y2;Q9HAP1;A0A7P0TAY0 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 0 5.5 0.5 1 1 68.07 68.114 3 0.00010866 21412 20230619_1885_Aki_TMTPro18x_K_F5 99.531 78.691 5035.9 3962.5 2629.6 4394.9 4551.6 4452.7 4892.7 4854 3924.2 3471.1 3151 4833.5 4605 3869.7 3102.2 3534.2 4015.8 2993 4637 3632.4 2910.9 4402.8 4583.2 4509.6 4880.4 4895.8 4024.2 3621.9 3344.5 4805.9 4582.9 4003.4 3233 3527.2 3826.4 2852.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7089900 14102 3656 13331 27000;27001 21692 21692 1 9606 Homo sapiens 0.12371941825153954 IVSQPQPAR Unmodified 994.55598 0.55597854 4208 Q8IX12-2;Q8IX12;A0A0C4DGG8;F5H2E6;F5H3E1;F5H1H2 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 0 0 0 7.5 0.5 1 1 35.794 35.824 2 0.00058315 7802 20230619_1888_Aki_TMTPro18x_K_F8 147.19 129.8 65582 38412 78145 81404 116060 134150 85665 102280 102780 65762 102670 112350 93712 86979 105780 50172 113360 104710 60630 35548 78928 79253 116780 130800 88717 105660 103590 69905 105050 111000 96548 88628 107450 54259 108330 98912 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 153410000 14103 4208 13332 27002;27003 21693;21694 21694 2 9606 Homo sapiens 0.05848278537371243 IVSRPEELREDDVGTGAGLLEIK Unmodified 2495.3231 0.32313164 2435 B3KX11;P49368;Q59H77;B4DUR8;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 2 4.5 1.12 1 1 1 1 55.702 55.75 4 3.1898E-34 16329 20230619_1886_Aki_TMTPro18x_K_F6 208.17 161.42 680170 603730 673940 711170 593400 751160 710110 680030 723840 811240 788800 824500 877500 732310 765300 969650 839730 922640 629220 553490 684260 709980 626520 754810 709890 703330 739800 813120 810400 833410 887360 771000 785470 967340 803300 876530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1258000000 14104 2435 13333 27004;27005;27006;27007 21695;21696 21696 2 9606 Homo sapiens 0.13528299744666583 IVSTSLDCLQK Unmodified 1262.654 0.6540376 477 A0A024R7X0;Q9Y6D6;E5RJN9 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes no 0 0 0 1 0 1 55.769 55.769 3 0.073187 16767 20230619_1880_Aki_TMTPro18x_K_F1 40.533 17.214 47083 43785 52544 54456 54966 59517 57981 57974 63707 63260 61315 57995 72262 56270 58626 83280 68224 75428 43615 40157 52970 54188 56958 59769 58474 59470 64514 63495 63472 59120 72732 59551 60525 82732 65233 71698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69939000 14105 477 13334 27008 21697 21697 1 9606 Homo sapiens 0.03321674280368825 IVSWLEMEYGLSEK Oxidation (M) 1698.8175 0.81747411 3853 Q53GX4;Q2TA84;Q13451;B7Z8G2;B7Z7Z8;Q6ZR21 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes no 0 1 0 7 0 1 65.38 65.407 3 0.0037498 20278 20230619_1887_Aki_TMTPro18x_K_F7 69.92 55.501 25834 18469 19132 27569 25319 22978 23420 23992 27741 28375 29253 28774 30656 25927 25293 33591 28750 32320 23818 16990 20127 27012 25743 23614 23858 24568 28091 28452 29994 29107 30989 27243 26053 33536 27499 30698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17157000 14106 3853 13335 27009 21698 21698 2531 1 9606 Homo sapiens -0.003981924592380892 IVSWLEYESSFSNEEAQK Unmodified 2144.9902 0.99022976 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 5.5 0.5 1 1 64.397 64.442 3 4.4306E-39 19934 20230619_1885_Aki_TMTPro18x_K_F5 262.42 252.5 88599 72164 82792 95966 59487 70609 75868 73172 85070 99206 102610 121110 126980 119850 95155 158290 138880 163020 81878 66262 84308 94609 64134 73380 75889 75354 86919 99524 105620 121960 127440 125650 100090 158500 132620 154700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137150000 14107 3789 13336 27010;27011 21699 21699 1 9606 Homo sapiens -0.03646574588901785 IVSWSQVGVEPSIMGIGPIPAIK Unmodified 2377.3079 0.30793927 2058 A8K4W5;Q59GW6;Q9BWD1;Q9BWD1-2 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes no 0 0 0 4.5 0.5 1 1 65.628 65.656 3 0.00033991 20682 20230619_1883_Aki_TMTPro18x_K_F4 72.086 61.299 13011 7190.9 8091.7 11208 10303 10828 11152 11958 12587 12896 15823 17499 17381 13064 8026.3 17683 16473 15247 11969 6626.8 8680.3 10976 10560 11001 11241 12164 12870 13117 16145 17408 17239 13865 8845.5 17530 15671 14512 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64499000 14108 2058 13337 27012;27013 21700;21701 21700 2 9606 Homo sapiens 0.1743776141379385 IVTDRETGSSK Unmodified 1191.6095 0.60953025 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V699;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 1 5 0.816 1 1 1 35.671 35.737 3 0.019574 7894 20230619_1886_Aki_TMTPro18x_K_F6 68.83 42.833 104160 59218 135750 108410 191680 152480 129650 178380 129510 94938 152460 148430 123730 121560 163830 71696 159880 127540 96370 54685 135850 106040 192440 151470 134530 178020 132740 102000 154150 147340 129180 123610 165140 76307 152780 120670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1386200000 14109 1658 13338 27014;27015;27016 21702 21702 1 9606 Homo sapiens 0.02138986458544423 IVTHDIPIK Unmodified 1034.6124 0.61243078 1946 H7C272;C9JA95;F8WAW9;C9JCK8;A4D2F2;O60921-2;O60921 HUS1 Checkpoint protein HUS1 yes no 0 0 0 8 0 1 46.781 46.829 3 0.003129 12195 20230619_1888_Aki_TMTPro18x_K_F8 72.928 49.692 51123 46519 53919 59332 63314 74635 65800 65042 68407 55223 73526 71160 72829 64402 71853 58607 80513 74768 47326 42679 54726 59050 65107 74067 66286 66855 69680 56852 75164 71303 74324 66353 73480 59944 76911 70865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46273000 14110 1946 13339 27017 21703 21703 1 9606 Homo sapiens 0.09650906374031365 IVTLEEEPIK Unmodified 1169.6544 0.65435518 1529 A0A3B3IUB9;A0A8V8TR92;A0A8V8TQB4;Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes no 0 0 0 3 0 1 56.821 56.857 3 0.0025848 17149 20230619_1882_Aki_TMTPro18x_K_F3 80.688 37.945 25818 19406 25549 25618 24148 28380 24838 26159 32853 35874 34406 43144 46884 39301 30742 42895 41970 55779 23859 17823 25954 25396 25241 28433 25266 27137 33114 35957 35813 43306 46691 40879 32235 43727 40144 52792 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20850000 14111 1529 13340 27018 21704 21704 1 9606 Homo sapiens 0.07631417271886676 IVTVVPQDTK Unmodified 1098.6285 0.62847478 1618 O95163;B4E3I9;A0A6Q8PHC9;Q4LE38;Q8N516;A0A6Q8PFH9;F5H2T0;B3KXE7;A0A6Q8PF66;A0A6Q8PGW3;A0A6Q8PHF4;A0A6Q8PG86;A0A6Q8PEX6;A0A6Q8PFB7;A0A6Q8PHI5;A0A6Q8PH48;Q68DI5;A0A6Q8PFN8;A0A6Q8PHA0;A0A6Q8PGR0;A0A6Q8PF69 IKBKAP;IKBKAP variant protein;DKFZp781H1425 Elongator complex protein 1 yes no 0 0 0 7 0 1 50.905 50.982 2 0.0047905 14029 20230619_1887_Aki_TMTPro18x_K_F7 103.7 71.766 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14112 1618 13341 27019 21705 21705 1 9606 Homo sapiens 0.08310567820262804 IVVEHIIMK Unmodified 1080.6365 0.63653704 595 D6RAA6;A6QKW0;A0A024R9W7;P57088 TMEM33;SHINC3 Transmembrane protein 33 yes no 0 0 0 1.5 0.5 1 1 53.269 53.286 3 0.00017713 15681 20230619_1880_Aki_TMTPro18x_K_F1 129.1 108.54 127720 101700 112480 133700 120820 143710 156110 147170 180710 147470 115020 115760 148300 113950 128600 162730 146610 145800 117960 93376 115830 132490 125910 144590 156000 150120 180080 148130 122580 118950 149340 120250 132290 161680 140100 138660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 766250000 14113 595 13342 27020;27021 21706;21707 21706 2 9606 Homo sapiens 0.09944423536057911 IVVFQYSDGK Unmodified 1154.5972 0.59717465 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5;Q16531-2 DDB1 DNA damage-binding protein 1 yes no 0 0 0 4.5 3.5 1 1 57.817 57.843 2 2.5757E-07 17597 20230619_1880_Aki_TMTPro18x_K_F1 220.39 133.07 289050 242480 257130 254960 237080 276290 266870 271120 285430 309470 314860 305380 331490 287070 301710 342040 322390 330350 267070 222120 263540 256910 248840 277730 268070 278340 291060 310540 322340 309660 336400 299610 308690 342090 308320 313860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 288560000 14114 1710 13343 27022;27023 21708;21709 21708 2 9606 Homo sapiens 0.026059947861767796 IVVLFYK Unmodified 880.54223 0.54222595 607;4151 Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;Q53FN7;Q7L1Q6-2;D3DN77;B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;B5MCE7;E9PFD4 BZW1;hCG_2022736;BZW2 Basic leucine zipper and W2 domain-containing protein 1;Basic leucine zipper and W2 domain-containing protein 2 no no 0 0 0 5.5 0.5 1 1 62.958 63.006 2 0.011653 19487 20230619_1886_Aki_TMTPro18x_K_F6 123.34 80.872 212830 194420 205340 200980 200780 244530 245910 238670 303640 133820 115220 97715 109560 88039 186460 95445 97820 84815 196880 178020 209170 203140 210390 243820 246950 241410 297990 140080 126890 100590 115620 91573 182850 95515 94360 80718 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 551090000 14115 4151;607 13344 27024;27025 21710 21710 1 9606 Homo sapiens 0.09717652776214436 IVVLLQR Unmodified 839.55927 0.559273 1053 A0A384NQ35;A0A0K0K1L8;Q06323-3;Q06323;Q06323-2;Q6FHU3;Q86SZ9;H0YLU2 PSME1 Proteasome activator complex subunit 1 yes no 0 0 0 5.5 0.5 1 1 55.895 55.964 2 0.007079 16220 20230619_1885_Aki_TMTPro18x_K_F5 128 76.966 167300 159650 147390 137170 200350 236670 206430 202080 267830 43837 44432 38554 28955 32048 114220 44501 45027 28475 154700 145950 152170 141840 204340 230990 209430 204530 259710 53073 55560 39332 34207 33873 110440 43856 43636 27276 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110920000 14116 1053 13345 27026;27027 21711 21711 1 9606 Homo sapiens 0.13307573382030569 IVVNLTGR Unmodified 870.5287 0.52870115 3065;2214 H3BN98;I3L246;I3L3P7;B2R4W8;P62244 RPS15A;hCG_1994130 40S ribosomal protein S15a no no 0 0 0 3.5 0.5 1 1 50.031 50.086 2 0.0065878 14010 20230619_1883_Aki_TMTPro18x_K_F4 110.12 65.673 1199200 1038300 984110 1095400 1225100 1431100 1294600 1352900 1553900 729450 688480 535020 613180 546370 913890 722440 708940 511510 1107600 951010 1022100 1106300 1256800 1419800 1308500 1370400 1531300 766280 743500 553620 642970 572270 911590 712090 678920 488790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3087599999.9999995 14117 3065;2214 13346 27028;27029 21712 21712 1 9606 Homo sapiens 0.0882579499698295 IVVPPLPGK Unmodified 918.59024 0.59023878 882 Q3SYF1;A0A087X0R6;Q9UMY4;Q9UMY4-1;Q9UMY4-3 SNX12 Sorting nexin-12 yes no 0 0 0 3 0 1 58.294 58.324 3 0.014431 17729 20230619_1882_Aki_TMTPro18x_K_F3 72.547 57.857 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14118 882 13347 27030 21713 21713 1 9606 Homo sapiens 0.12768726696276644 IVVSNTPR Unmodified 884.50797 0.50796571 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 4.5 3.04 1 1 1 1 38.55 38.579 2 0.0045058 9440 20230619_1880_Aki_TMTPro18x_K_F1 116.25 80.37 153070 118740 146860 158400 188420 193620 174740 182520 225690 174060 205340 185720 196230 166790 179390 185190 233770 186140 141450 109060 150380 157140 192040 192870 178550 186960 226050 176830 211080 187470 199830 173640 185720 185870 222810 176960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98901000 14119 2863 13348 27031;27032;27033;27034 21714;21715 21714 2 9606 Homo sapiens 0.061092046173257586 IVVVTAGVR Unmodified 912.57565 0.57565135 1577 P07195;Q5U077;A0A5F9ZHM4;A0A3B3IS95;A8MW50;C9J7H8;F5H793 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 5.5 1.71 1 1 1 1 1 1 48.122 48.193 2 7.478E-06 12945 20230619_1885_Aki_TMTPro18x_K_F5 178.87 130.52 1744500 1458400 1442900 1410900 1549300 2840400 1614300 1491100 3084500 998890 936680 1017700 1052000 870850 1182000 1168700 1264300 1130900 1611000 1335100 1493600 1447200 1615600 2730200 1667000 1603100 2966600 1042600 1067600 1027900 1077400 918970 1204000 1167500 1207900 1075000 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3486399999.9999995 14120 1577 13349 27035;27036;27037;27038;27039;27040 21716;21717;21718;21719 21717 4 9606 Homo sapiens 0.11586654548136721 IVWEHTR Unmodified 939.49265 0.49265 3198 M0R0Q5;M0R398;Q96IQ9-2 ZNF414 yes no 0 0 0 7 0 1 39.08 39.144 3 0.0031225 8899 20230619_1887_Aki_TMTPro18x_K_F7 117.16 91.423 33284 24356 37293 36045 37493 44642 38223 39818 52735 35414 34936 33870 38548 30075 30092 39089 44620 34844 30787 22401 37548 35543 38988 44354 38945 40885 52148 36020 36820 34344 38834 31634 31594 38873 42484 33175 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15040000 14121 3198 13350 27041 21720 21720 1 9606 Homo sapiens 0.020483378201220148 IVWLQEK Unmodified 914.52255 0.52255314 3637 Q9BW75;Q96CV8;P52888;K7EKB6 THOP1 Thimet oligopeptidase yes no 0 0 0 1.5 0.5 2 2 59.077 59.084 2;3 0.0085671 18125 20230619_1880_Aki_TMTPro18x_K_F1 128.48 41.691 140250 127420 128640 143920 147970 189690 163660 172170 199440 148150 138040 131170 147190 123730 161890 152010 150490 153440 129690 116760 132080 144600 152870 187870 165170 176380 198590 150610 144930 133740 150640 129410 163680 152420 144120 145710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 153010000 14122 3637 13351 27042;27043;27044;27045 21721;21722 21721 2 9606 Homo sapiens 0.06187276765467686 IVYGHLDDPASQEIER Unmodified 1840.8955 0.89554151 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;A0A7I2V614;Q71UF1;A0A7I2V538;A0A7I2V6A6;A0A7I2V3C8;A0A7I2V5W7;A0A7I2V4I8;A0A7I2V3U7 ACO2 Aconitate hydratase, mitochondrial yes no 0 0 0 2.5 0.5 1 1 48.398 48.47 3 7.354099999999999E-53 13437 20230619_1882_Aki_TMTPro18x_K_F3 242.01 218.33 96825 73308 83621 100030 104610 112130 121080 111990 129630 112180 119670 117520 116850 99042 117740 119920 126900 135160 89389 67350 86477 98949 107440 112450 121330 114440 131120 113550 123140 118460 119400 103910 120230 121020 121390 128190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 692090000 14123 1050 13352 27046;27047 21723 21723 1 9606 Homo sapiens 0.008729564504164955 IVYLYTK Unmodified 898.51641 0.51640513 1905 P49207;A1LUY1 RPL34 60S ribosomal protein L34 yes no 0 0 0 4 0.816 1 1 1 57.345 57.378 2 0.0051635 17368 20230619_1882_Aki_TMTPro18x_K_F3 151.17 99.386 841400 716380 701750 759850 835920 978910 526970 920440 751820 401240 338450 262140 354970 271600 510360 427910 394160 270130 777150 656240 726540 766940 850800 971850 557400 929180 736260 429520 367240 273690 369080 288140 509330 418970 377400 258700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1153100000 14124 1905 13353 27048;27049;27050 21724;21725 21724 2 9606 Homo sapiens 0.06308758533941727 IVYPPQLPGEPR Unmodified 1364.7452 0.74523587 2899 E7ESL0;J3KQY1;Q9NWU5 MRPL22 39S ribosomal protein L22, mitochondrial yes no 0 0 0 8 0 1 55.634 55.696 2 0.00015916 16009 20230619_1888_Aki_TMTPro18x_K_F8 131.52 87.709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14125 2899 13354 27051 21726 21726 1 9606 Homo sapiens 0.07745306040033029 IVYRDLK Unmodified 905.53345 0.53345218 1590;3950;2855 A0A7P0T8T9;A0A5K1VW74;Q9Y243;Q56A86;Q9Y243-2;A0A5F9ZGY0;A0A5F9ZHU3;A0A7P0TB32;Q5H9Q5;B3KPS5;A8K8M5;A0A024R807;Q53EW6;Q15523;B9EIS4;Q6FHV7;K7EL10;Q16513-2;Q96BR1-2;Q96BR1;P32298-3;P32298-4;P32298-2;B7Z340;P32298;Q16513-5;Q16513-4;Q16513-3;Q15835;Q16513;Q16512;Q16512-2;D6RHX8;F8W9W2;Q96AD6;P43250-3;P43250;P43250-2 AKT3;DKFZp781N0293;SGK3;GRK1;SGKL;PKN1;PKN2;GRK4;GRK6 RAC-gamma serine/threonine-protein kinase;Serine/threonine-protein kinase N2;Serine/threonine-protein kinase Sgk3;G protein-coupled receptor kinase 4;Rhodopsin kinase;Serine/threonine-protein kinase N1;G protein-coupled receptor kinase 6 no no 0 0 1 7 0.816 1 1 1 43.353 43.414 3 0.079154 10844 20230619_1888_Aki_TMTPro18x_K_F8 56.411 2.0068 338600 265350 361860 322530 302060 485290 371740 362150 115290 332710 338370 357420 462040 351200 436390 413770 381910 359970 313190 243460 364720 323170 320830 475100 363320 377630 141840 338130 342510 361650 465910 365880 441040 411930 365790 342550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 482550000 14126 1590;3950;2855 13355 27052;27053;27054 21727 21727 1 9606 Homo sapiens 0.07690679139761869 IWADIPAPK Unmodified 1009.5597 0.55966693 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GW82;A0A1B0GUA1;A0A0J9YWF7;A0A1B0GUY0;F8WDY6 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 4.5 3.5 1 1 60.532 60.549 3 0.0033805 18667 20230619_1880_Aki_TMTPro18x_K_F1 81.594 44.483 81014 55313 72354 70819 69381 91563 81371 82151 98355 96357 94831 106750 114380 102870 94927 118250 114900 137430 74768 50805 74187 70519 72787 90751 81884 84936 99127 96965 98389 107750 115250 107060 98107 119580 109900 130250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181500000 14127 1415 13356 27055;27056 21728;21729 21728 2 9606 Homo sapiens 0.055269483112283524 IWAHEALR Unmodified 994.53485 0.53484916 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5.33 3.09 1 1 1 42.39 42.391 3 3.5533E-14 10253 20230619_1887_Aki_TMTPro18x_K_F7 168.23 100.25 120030 100430 114530 112820 122380 137510 134350 132810 158370 93689 99831 84333 94247 81129 124350 100480 100890 75407 110960 92049 116920 113290 126870 137070 135470 134940 157420 96626 104910 86049 97812 84779 124480 99361 96578 71981 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 229290000 14128 3881 13357 27057;27058;27059 21730;21731;21732 21731 3 9606 Homo sapiens 0.03736313228512245 IWCFGPDGTGPNILTDITK Unmodified 2104.0299 0.029926505 3447 P13639;Q8TA90;B4DPU3;Q6W6M8 EEF2 Elongation factor 2 yes no 0 0 0 1.5 0.5 1 1 65.148 65.152 3 1.303E-24 20859 20230619_1881_Aki_TMTPro18x_K_F2 199.08 183.48 469220 342120 382380 429230 293900 472330 372010 422600 540500 578580 498450 602100 772590 654280 408770 933870 783850 846040 432910 314080 394740 426810 316120 472830 375990 439200 540040 577280 525590 612290 762980 687870 445680 927320 746790 804270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1472499999.9999998 14129 3447 13358 27060;27061 21733;21734 21734 2 9606 Homo sapiens 0.022072738807764836 IWDISQPGSK Unmodified 1129.5768 0.57677356 2343 Q04726-3;B4E2W3;Q6PRX2;Q6PRX3;H0YL70;H0YNT2;B3KUA2;H0YNI7;B3KM67;H0YKN8;Q04726-2;Q04726-7;Q04726-6;Q04726-5;Q04726-4;Q04726;H0YKT5;Q59EY9;H0YLI3 TLE3 Transducin-like enhancer protein 3 yes no 0 0 0 8 0 1 56.143 56.2 2 0.0025982 16229 20230619_1888_Aki_TMTPro18x_K_F8 112.75 81.376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14130 2343 13359 27062 21735 21735 1 9606 Homo sapiens 0.01716824126378924 IWDLEGK Unmodified 859.44397 0.44396847 2907 P63244;E9KL35;J3KPE3;H0Y8W2;D6RAC2;H0YAF8;D6REE5;H0YAM7;D6RF23;H0Y9P0 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 5 1.22 1 2 2 2 1 58.55 58.59 2;3 0.0049875 17247 20230619_1887_Aki_TMTPro18x_K_F7 121.52 19.873 1186200 1014500 1104700 1138100 1073400 1286000 1279500 1232700 1340500 1476200 1377000 1344100 1618700 1251200 1282300 1572700 1459200 1505900 1096500 929790 1128900 1141500 1123800 1288000 1280100 1269400 1364800 1474700 1421300 1367500 1627600 1311400 1321200 1570700 1394800 1430900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2327800000 14131 2907 13360 27063;27064;27065;27066;27067;27068;27069;27070 21736;21737;21738;21739;21740 21740 5 9606 Homo sapiens 0.008624244603765874 IWDLQGSEEPVFR Unmodified 1574.7729 0.77290718 2945 E9PS41;Q6RFH5;Q6RFH5-2;B4E018 WDR74 WD repeat-containing protein 74 yes no 0 0 0 4 0 1 62.24 62.245 2 0.024882 19270 20230619_1883_Aki_TMTPro18x_K_F4 60.255 35.912 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14132 2945 13361 27071 21741 21741 1 9606 Homo sapiens 0.008511645095722997 IWDPTPSHTPAGAATPGR Unmodified 1830.9013 0.90129559 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 0 7.5 0.5 1 1 44.626 44.677 3 2.5182E-19 11324 20230619_1888_Aki_TMTPro18x_K_F8 190.46 166.11 79232 47594 81636 79491 90120 98722 101200 92540 112040 88610 100030 97517 108100 91090 103160 90352 112770 114900 73160 43881 82855 77873 93218 98175 101700 94875 112970 90093 103550 98384 109840 94181 105440 92228 107820 108870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 400480000 14133 3309 13362 27072;27073 21742;21743 21743 2 9606 Homo sapiens 0.019080997526998544 IWDPVHR Unmodified 921.48209 0.48208531 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1;A0A494C0X4;A0A494C1S4;A0A494C159 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 7.5 0.5 1 1 44.213 44.264 3 0.0016544 11026 20230619_1887_Aki_TMTPro18x_K_F7 125.62 99.023 158810 133720 143930 137200 135110 166090 159080 162470 174470 199840 195180 190260 208680 173680 173390 218010 196920 211330 146760 122470 147290 138760 141850 165700 159540 167170 177840 199620 199810 193060 210850 182070 178490 217860 188290 200740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 181670000 14134 1552 13363 27074;27075 21744;21745;21746 21745 3 9606 Homo sapiens 0.01820355165705223 IWDTASGQCLK Unmodified 1277.6074 0.60742176 3700 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 8 0 1 54.474 54.541 3 0.00062849 15504 20230619_1888_Aki_TMTPro18x_K_F8 94.465 69.674 228710 184720 204410 209790 211280 233160 251260 242640 268870 275830 239380 226780 306050 243540 208770 318160 286460 275660 211270 169350 209830 210210 220020 234260 251530 248070 271950 275520 249740 233170 305590 254690 218890 315820 273260 262310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137680000 14135 3700 13364 27076 21747 21747 1 9606 Homo sapiens -0.020277655509062242 IWDTLQK Unmodified 902.48617 0.48616764 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 4.5 3.5 1 1 57.718 57.744 2;3 0.003113 16865 20230619_1888_Aki_TMTPro18x_K_F8 167.82 29.582 437280 367240 436440 493630 396930 507840 494470 497920 620280 624750 605610 794270 792580 657760 552180 771640 840640 829280 404400 337210 443290 488190 418750 511990 496840 512880 624510 629740 631250 793390 791760 689050 582810 776170 801450 787080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 470050000 14136 1723 13365 27077;27078 21748;21749 21749 2 9606 Homo sapiens 0.031023998687714993 IWDTTAGR Unmodified 918.45593 0.45593014 2638 B4E303;B4E074;Q9NVX2;A0A0A0MRH0;K7EN33 NLE1 Notchless protein homolog 1 yes no 0 0 0 6.5 0.5 1 1 46.378 46.464 2 0.010701 12343 20230619_1886_Aki_TMTPro18x_K_F6 98.009 68.202 101240 77315 96755 104540 112760 118980 102060 117500 136970 124100 120670 115580 119950 92484 131730 120680 152470 136070 93538 71022 98929 103510 115600 119180 104650 120260 136930 124820 124540 116940 122980 97741 134820 121710 145570 129130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73373000 14137 2638 13366 27079;27080 21750 21750 1 9606 Homo sapiens -0.006559587964261482 IWDTTQK Unmodified 890.44978 0.44978213 4000 Q59ER5;Q53H17;Q53GN4;A0A8V8TNU2;A0A8V8TNT7;O75083;A0A8V8TP22;A0A8V8TQ74;A0A8V8TQK0;V9HWG7;A0A8V8TP31;D6RD66 WDR1;HEL-S-52 WD repeat-containing protein 1 yes no 0 0 0 7 0 1 49.696 49.781 3 0.015081 13470 20230619_1887_Aki_TMTPro18x_K_F7 78.178 29.755 69085 50045 64738 69491 83798 95207 76505 82459 105690 90164 92182 78356 93688 72146 80651 91680 108890 90820 63802 45995 66442 68888 85424 93999 78460 85274 105460 90402 95164 79929 94938 75710 83850 91734 103780 86337 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49179000 14138 4000 13367 27081 21751 21751 1 9606 Homo sapiens 0.00017522972052574914 IWDVSSGK Unmodified 890.44978 0.44978213 3700 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 8 0 1 53.284 53.358 2 0.0093026 14996 20230619_1888_Aki_TMTPro18x_K_F8 95.741 48.674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14139 3700 13368 27082 21752 21752 1 9606 Homo sapiens 0.00017522972063943598 IWDYQNK Unmodified 965.46068 0.46068117 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258;B4E2C9;A0A7I2V3G0;A0A7I2YQF9 COPB2 Coatomer subunit beta' yes no 0 0 0 7.5 0.5 1 1 52.237 52.313 2 0.0049029 14520 20230619_1888_Aki_TMTPro18x_K_F8 145.04 76.623 381890 310940 364150 384030 386930 453770 460950 445060 470160 526550 519200 459670 573900 457740 444680 551850 567540 544360 352980 285290 371950 382760 402240 453290 460750 457360 480750 525690 532280 469870 577710 477450 461810 552310 541670 517200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 244410000 14140 3031 13369 27083;27084 21753 21753 1 9606 Homo sapiens -0.023430746536746483 IWEQIQPDLHTNDECVATYK Unmodified 2459.1427 0.14272443 1746 A0A8C8MUD1;Q12904;Q12904-2;B4DNK3;A0A8C8KIA0 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 0 0 5.5 0.5 1 1 59.513 59.57 3 9.7084E-17 17714 20230619_1885_Aki_TMTPro18x_K_F5 166.25 152.09 91971 81094 85472 95498 74422 89530 98973 92426 97621 116480 109030 110530 125260 112120 98527 129080 124330 135510 85035 74348 87277 95196 78881 91058 98340 94898 100090 116220 112040 112530 126110 116500 102250 129700 118790 128600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 118390000 14141 1746 13370 27085;27086 21754;21755;21756 21754 3 9606 Homo sapiens -0.028481221837864723 IWGDCTVR Unmodified 1005.4702 0.4702 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 0 6 0.816 1 1 1 47.497 47.579 2 0.0025131 12437 20230619_1887_Aki_TMTPro18x_K_F7 144.35 121.52 614770 468360 543930 607280 540200 670740 651610 629290 741800 584790 630480 699740 722710 614470 771920 691200 836820 797920 567680 430040 558900 602580 565220 672210 653220 644740 745680 597210 656920 702210 737170 640830 787140 699610 799770 756880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 624930000 14142 3609 13371 27087;27088;27089 21757;21758 21758 2 9606 Homo sapiens -0.032316296397766564 IWGLDFGDCHK Unmodified 1346.6078 0.60775611 4064 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 WDR3 WD repeat-containing protein 3 yes no 0 0 0 7.5 0.5 1 1 59.122 59.168 3 1.1166E-05 17473 20230619_1888_Aki_TMTPro18x_K_F8 143.17 107.43 91270 82408 96290 91632 84743 101070 105240 101420 104130 114990 116890 114820 132070 99440 114730 135690 118030 128670 84488 75506 97212 91959 89502 101500 104930 103950 106720 115450 119980 116090 133380 105050 117270 135310 112970 122250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122360000 14143 4064 13372 27090;27091 21759 21759 1 9606 Homo sapiens -0.051683458310435526 IWHHTFYNELR Unmodified 1514.7419 0.74188183 3112;3679;2695;3167;4132 B7Z6P1;P68133;P68032;A8K3K1;A6NL76;Q7Z7J6;A0A804HKV3;Q562X6;Q562P8;Q562X0;Q562Q8;Q562R6;Q562R5;Q562R0;Q562Q9;Q562X4;Q562Q6;Q562Q2;Q562Q0;Q562T0;Q562L3;Q562X7;Q562Q4;Q562T4;Q562X1;Q562U1;Q562U0;Q562T6;Q562W2;Q562T8;Q562X2;Q562Y4;Q562T5;Q562T3;P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;I3L3I0;I3L1U9;J3KT65;I3L3R2;A1E282;L0R5C4;Q9BYX7;Q562L5;Q562Z7;Q562N0;Q562Y6;Q562S0;Q562X9;Q562N8;Q562N6;Q562Y8;Q562N2;Q562M5;Q562M3;Q562U2;Q562L6;Q562N4;Q562P9;K7EM38;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;A0A2R8YGF8;A0A6Q8PH58;G5E9R0;C9JZR7;C9JUM1;Q6S8J3;A5A3E0;P0CG38;P0CG39 ACTA1;ACTC1;ACT;ACTG1;POTEM;POTEKP;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;POTEJ Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J no no 0 0 0 2.67 1.25 1 2 2 1 42.378 42.436 4 3.4314E-12 11921 20230619_1882_Aki_TMTPro18x_K_F3 198.62 160.94 256890 171040 241090 312180 292970 321400 301020 316430 262000 201590 185010 181940 184770 132770 218010 186700 208610 198630 237140 157820 247450 303460 300280 323930 301850 320570 265990 209270 193580 184010 190030 141590 220400 187500 199620 188570 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 2114699999.9999998 14144 2695;3112;3167;3679;4132 13373 27092;27093;27094;27095;27096;27097 21760;21761;21762;21763;21764 21763 5 9606 Homo sapiens 0.005100559860466092 IWLAAHWDK Unmodified 1138.5924 0.59236404 577 A0A024R9J0;O60216;A0A8I5KWV3;B3KUT8;E5RJW1;E5RJK5;E5RFV8;E5RIN7 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 0 0 3 0 1 57.602 57.634 3 0.045313 17486 20230619_1882_Aki_TMTPro18x_K_F3 49.06 29.789 33037 28746 38278 37028 29681 41840 36322 35708 43253 36243 39633 38345 46377 35610 36432 40789 43888 42506 30600 26379 38322 36775 31754 41776 36467 36926 43505 36686 41111 38753 46626 37118 37654 40992 41910 40359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23505000 14145 577 13374 27098 21765 21765 1 9606 Homo sapiens 0.028611554340841394 IWPGYSELPAVK Unmodified 1358.7234 0.72343779 1016 A0A0D9SEN2;P21127-3;A0A0D9SER5;A0A0D9SEI3;B4E3D9;P21127-2;P21127-8;P21127;P21127-9;P21127-6;P21127-12;A4VCI5;Q6P5Y5;P21127-4;P21127-10;P21127-5 CDK11B;CDC2L1;CDC2L2 Cyclin-dependent kinase 11B yes no 0 0 0 1.5 0.5 1 1 62.101 62.106 3 0.0017027 19563 20230619_1881_Aki_TMTPro18x_K_F2 80.763 58.23 46914 42507 54028 54634 41643 48431 48489 52327 55682 58590 48898 55589 63894 50833 55249 58689 56395 71227 43463 39001 54106 54107 44424 49530 48755 53357 56105 58774 51194 56373 64300 53055 56418 59538 54050 67464 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111240000 14146 1016 13375 27099;27100 21766 21766 1 9606 Homo sapiens 0.05842501291476765 IWQYVYSK Unmodified 1085.5546 0.55458155 1483;3577 A0A384NQ21;P61163;R4GMT0;B4DM97;A0A1B0GVS3;B4DXP9;B4DMT4;P42025;Q13841 ACTR1A;ACTR1B Alpha-centractin;Beta-centractin no no 0 0 0 4.33 0.471 2 1 61.714 61.74 2;3 0.023308 18684 20230619_1885_Aki_TMTPro18x_K_F5 58.23 28.757 271570 241270 306140 318230 261460 314950 251840 240560 344680 269360 242090 247620 287180 222320 283660 252530 272270 294320 251510 221450 307480 314910 275150 316960 257450 251850 341740 270290 255270 251420 291380 231980 287700 255720 260760 279030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192950000 14147 1483;3577 13376 27101;27102;27103 21767;21768 21768 2 9606 Homo sapiens 0.01522644448596111 IWSLYDAGPR Unmodified 1176.5928 0.59275797 365 H0YML6;H0YLD7;H0YLW1;H0YLT5;H0YKM6;H0YMB7;H0YKB0;A0A024R5Y1;Q9NZD8-2;Q9NZD8 SPG21 Maspardin yes no 0 0 0 2 0 1 60.281 60.293 2 0.00051597 18758 20230619_1881_Aki_TMTPro18x_K_F2 121.64 98.082 41557 27812 41838 35690 32958 47666 41923 39599 50285 46668 48446 42695 49937 42885 48523 60355 52894 57202 38385 25549 42320 35561 35276 47073 42018 41195 50667 46690 49823 43585 50861 45156 49676 60153 50596 54348 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53597000 14148 365 13377 27104 21769 21769 1 9606 Homo sapiens 0.01152530363265214 IWSTVPTDEEDEMEESTNRPR Oxidation (M) 2536.1024 0.10237576 4009 Q9GZL7;Q53T99;B4DRY7 WDR12 Ribosome biogenesis protein WDR12 yes no 0 1 1 1 0 1 48.337 48.337 3 1.7386E-08 13690 20230619_1880_Aki_TMTPro18x_K_F1 118.32 114.83 13529 11002 13850 15432 14771 14533 15796 13619 13402 14143 16988 16259 18483 13274 14949 18076 15168 17565 12512 10108 14065 15203 15273 14746 15795 14004 13935 14326 17321 16320 18628 14054 15294 18049 14527 16680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72150000 14149 4009 13378 27105 21770 21770 2647 1 9606 Homo sapiens -0.10423133364884052 IWSTVPTDEEDEMEESTNRPR Unmodified 2520.1075 0.10746114 4009 Q9GZL7;Q53T99;B4DRY7 WDR12 Ribosome biogenesis protein WDR12 yes no 0 0 1 1.5 0.5 1 1 53.031 53.047 3 3.9497E-55 15774 20230619_1881_Aki_TMTPro18x_K_F2 278.82 261.23 131600 105120 127390 148040 116480 157620 141640 142720 158420 167550 155130 165210 194610 148200 156590 201480 174970 188720 121640 96594 129760 146030 122770 158210 141910 147510 160430 167920 161100 167270 195460 156320 161170 200760 167330 179330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 200660000 14150 4009 13378 27106;27107 21771;21772;21773 21773 3 9606 Homo sapiens -0.09178829502297958 IWSVPNASCVQVVR Unmodified 1613.8348 0.83479593 4685 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 4.5 0.5 1 1 58.102 58.132 2 3.9205E-12 17125 20230619_1885_Aki_TMTPro18x_K_F5 234.3 184.88 197610 162820 173800 175700 165340 208580 204180 197430 218970 148650 135640 115540 150130 116480 170610 153700 153930 121450 182550 149190 178460 176890 173710 208140 204030 201150 218730 151980 143690 118990 153690 122130 172090 152120 147220 115820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 170430000 14151 4685 13379 27108;27109 21774;21775;21776 21776 3 9606 Homo sapiens 0.05243192657076179 IWYLLDGK Unmodified 1006.5488 0.54876789 4469 Q9BYD1;E5RFI2 MRPL13 39S ribosomal protein L13, mitochondrial yes no 0 0 0 3 0 1 64.097 64.127 3 0.0074335 20183 20230619_1882_Aki_TMTPro18x_K_F3 72.789 57.638 15110 14419 19665 20276 19835 22509 22795 23856 23428 27381 22717 21291 23676 19391 22969 24785 27362 25112 14021 13240 19607 20023 20655 22615 22838 24361 23834 27286 23379 21824 24101 20362 23620 24833 26122 23857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59321000 14152 4469 13380 27110 21777 21777 1 9606 Homo sapiens 0.04575545936961589 IYAMHWGTDSR Unmodified 1335.603 0.60300508 3730;1179 Q6FHM2;P62879;C9JIS1;C9JXA5;C9JZN1;E7EP32;B2R6K4;A0A140VJJ8;P62873;F6X3N5;A0A2L0WW42;P62873-2;A0A994J3T6;F6UT28;A0A994J6X8;B1AKQ8 GNB2;GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 0 1 0 1 48.298 48.298 3 3.0101E-17 13662 20230619_1880_Aki_TMTPro18x_K_F1 187.16 126.44 63876 55393 64882 74517 57715 71179 71844 73202 74865 59618 55120 50964 55396 49262 62195 58058 63456 54411 59094 50857 65789 73623 60940 72242 71721 74294 75273 60737 57497 52100 56880 51332 63167 58018 60639 51751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 213760000 14153 3730;1179 13381 27111 21778 21778 1 9606 Homo sapiens -0.0513722997379773 IYAMHWGTDSR Oxidation (M) 1351.5979 0.5979197 3730;1179 Q6FHM2;P62879;C9JIS1;C9JXA5;C9JZN1;E7EP32;B2R6K4;A0A140VJJ8;P62873;F6X3N5;A0A2L0WW42;P62873-2;A0A994J3T6;F6UT28;A0A994J6X8;B1AKQ8 GNB2;GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 1 0 7.5 0.5 1 1 41.665 41.699 3 5.9046E-05 10178 20230619_1888_Aki_TMTPro18x_K_F8 123.01 108.13 70028 54458 72092 79515 85793 89023 85369 86667 88970 65879 82418 78756 68540 61964 77814 68988 84460 80943 64748 50066 73309 78335 87954 89225 86218 88155 90075 68108 84264 78831 70869 64836 79279 69915 80722 76766 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127600000 14154 3730;1179 13381 27112;27113 21779 21779 722 1 9606 Homo sapiens -0.06381533836429298 IYAPEAPYTSHDK Unmodified 1490.7042 0.70415892 3001 G1UI16;Q29RF7;Q29RF7-3;H0Y9L9 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 0 5 0 1 45.04 45.117 3 8.1808E-08 11692 20230619_1885_Aki_TMTPro18x_K_F5 149.57 128.01 57966 48118 57866 59477 64334 73249 64307 59717 82659 63557 71591 71001 80638 64451 62961 88199 79462 77512 53604 44145 58900 59305 66359 72711 65394 62063 82676 64316 74343 71578 81166 67950 65384 87575 75856 73741 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89118000 14155 3001 13382 27114 21780 21780 1 9606 Homo sapiens -0.02156499790135058 IYDLNKPEAEPK Unmodified 1415.7296 0.72964538 4727 Q9Y3F4;Q9Y3F4-2;B0AZV0 STRAP Serine-threonine kinase receptor-associated protein yes no 0 0 1 5.71 1.03 1 2 2 2 48.692 48.766 3;4 0.00013704 13333 20230619_1886_Aki_TMTPro18x_K_F6 110.98 87.749 380170 308630 353060 381430 357110 410120 412550 386720 417810 482540 450090 422840 533810 413850 404890 541430 422750 451560 351310 283170 361180 379590 372210 412000 412940 399300 427110 480660 463670 431860 535690 434050 415750 536630 404510 429740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1260800000 14156 4727 13383 27115;27116;27117;27118;27119;27120;27121 21781;21782 21782 2 9606 Homo sapiens 0.03840974732338509 IYDPQEGAVVVLPADSQQR Unmodified 2084.0538 0.05383307 130 A0A024R169;Q9NXF1-2;Q9NXF1;B4DQR0 TEX10 Testis-expressed sequence 10 protein yes no 0 0 0 4.67 0.471 1 2 57.474 57.505 3 2.2551E-07 17288 20230619_1883_Aki_TMTPro18x_K_F4 109.65 99.593 21351 15006 20067 18968 21478 23154 20648 24656 30255 18915 20713 18050 19576 16897 19848 18920 19837 20478 19715 13779 20503 18892 22193 23128 21170 24914 29860 19418 21632 18340 20034 17579 20172 19072 18984 19431 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90004000 14157 130 13384 27122;27123;27124 21783;21784 21783 2 9606 Homo sapiens 0.05516830638771353 IYDYNSVIR Unmodified 1141.5768 0.57677356 1696 A0A7P0T8Z7;A0A7P0Z4A2;A0A7P0Z4A5;A0A7P0T8D4;B2RAU5;A0A7P0T8S8;A0A7P0T8Z2;A0A7P0T8C7;Q9Y5X1;B3KXH8;A0A7P0T8M2 SNX9 Sorting nexin;Sorting nexin-9 yes no 0 0 0 8 0 1 51.601 51.678 2 0.00017501 14255 20230619_1888_Aki_TMTPro18x_K_F8 145.17 113.24 144970 113880 140090 133550 140620 167970 151660 137770 180580 158940 158530 154050 160040 131500 159030 185280 173910 182490 133980 104440 142700 133730 146460 166540 153150 143420 181410 159430 163750 155910 163240 139270 162700 185080 166310 173330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102460000 14158 1696 13385 27125 21785 21785 1 9606 Homo sapiens 0.011648241263628734 IYEDGDDDMK Unmodified 1199.4652 0.46523378 552 Q6NVY0;A0A024R904;Q9HB71;Q9HB71-3 CACYBP Calcyclin-binding protein yes no 0 0 0 2 0 1 47.771 47.842 2 3.1415E-05 13450 20230619_1881_Aki_TMTPro18x_K_F2 154.56 140.14 75079 52856 59801 71339 69327 87273 64288 67989 107970 94155 102870 116130 124630 108960 72189 154250 161880 168240 69246 48570 62234 70689 71341 86563 66463 71490 107300 94501 106730 116720 124150 115020 79732 154770 154060 159620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45570000 14159 552 13386 27126 21786 21786 1 9606 Homo sapiens -0.12652023083751374 IYEEAWTK Unmodified 1038.5022 0.50221163 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;Q9BXJ9-4;A0A8V8TQT7 NAA15;NARG1 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 5 0 1 54.455 54.522 3 0.0077343 15621 20230619_1885_Aki_TMTPro18x_K_F5 82.426 62.096 67546 52910 59434 62769 54030 58016 63475 64986 76900 72264 67557 65764 80584 62966 75329 79546 70357 67312 62379 48533 60984 62541 56827 59203 63881 66103 77226 72452 70320 66983 81538 65935 76439 78982 67344 64074 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93906000 14160 2297 13387 27127 21787 21787 1 9606 Homo sapiens -0.015499386850024166 IYEFPETDDEEENK Unmodified 1756.7316 0.73155546 1949 Q8TC62;E7EPK1;A4GYY8;Q3LIE9;Q16181;Q16181-2;E7ES33;B4DUD6;B4DNE4;A8K3D0;A0A024RA87;A0A023T695;G3V1Q4;B4DPQ6;Q59EY4 SEPT7;DKFZp686F17268;Nbla02942 Septin-7 yes no 0 0 0 2.5 1.12 1 1 1 1 55.281 55.299 3 6.9957E-37 16691 20230619_1881_Aki_TMTPro18x_K_F2 268.08 261.51 327880 247890 290930 346110 322890 405100 374230 390130 498370 358870 336390 347910 353200 324780 355300 402210 381780 379640 302750 227800 299530 342080 334910 404560 378020 398670 493850 364350 353620 352990 360340 339750 362980 401560 365010 360830 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1851999999.9999998 14161 1949 13388 27128;27129;27130;27131 21788;21789;21790 21789 3 9606 Homo sapiens -0.11654105831030392 IYELAAGGTAVGTGLNTR Unmodified 1762.9214 0.92136233 3406 P07954-2;A0A804HI24;A0A0S2Z4C3;P07954 FH Fumarate hydratase, mitochondrial yes no 0 0 0 1.67 0.471 1 2 57.867 57.877 2;3 1.3729E-38 17765 20230619_1881_Aki_TMTPro18x_K_F2 252.25 233.79 122770 85883 99413 111640 109680 116170 120420 128940 143460 137710 125550 122170 136210 111900 125300 139190 128310 146230 113240 78888 103150 110690 113450 117420 121510 131030 144170 138230 130100 124390 138130 117270 127850 139790 122860 138750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 767240000 14162 3406 13389 27132;27133;27134 21791;21792 21792 2 9606 Homo sapiens 0.07041850692621665 IYETLALAER Unmodified 1177.6343 0.63428844 1830 A0A8V8TMX5;Q9UK59;A0A8V8TMH0;A0A8V8TNX0;A0A8V8TMF7;F8WAY1 DBR1 Lariat debranching enzyme yes no 0 0 0 5.5 0.5 1 1 58.416 58.477 2 2.4827E-05 17482 20230619_1886_Aki_TMTPro18x_K_F6 170.5 143.71 210010 177780 177800 198050 193690 224360 223530 208830 227390 239780 236680 224840 255180 227080 221350 285000 258620 261240 193980 162930 183680 198720 200850 224550 223740 215270 231920 240230 243130 229150 258350 237170 228090 283960 247100 248370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147090000 14163 1830 13390 27135;27136 21793 21793 1 9606 Homo sapiens 0.05257666331931432 IYFMAGSSR Unmodified 1030.4906 0.49060109 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;Q58FF2 HSP90B1;HEL-S-125m;TRA1;GRP94c Endoplasmin yes no 0 0 0 4 0.816 1 1 1 51.851 51.907 2 5.0233E-05 14853 20230619_1883_Aki_TMTPro18x_K_F4 163.72 152.13 647260 587070 535620 526750 650490 926670 719800 715130 1046100 200700 209330 270700 261810 218530 407640 256300 285540 298970 598050 536950 555420 542510 670990 901470 730920 731230 1011000 234390 257200 270190 272790 229170 404360 259820 274480 283460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 383290000 14164 3452 13391 27137;27138;27139 21794 21794 1 9606 Homo sapiens -0.02342458979978801 IYGADDIELLPEAQHK Unmodified 1810.9101 0.91012895 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 3.5 1.12 1 1 1 1 57.543 57.57 3 1.5038999999999998E-19 16863 20230619_1885_Aki_TMTPro18x_K_F5 209.39 187.19 481860 396570 433430 414010 324150 436390 521630 437740 404320 565100 565160 657950 649330 548380 554300 688280 559780 695990 445210 363270 442740 417290 350960 439630 510930 450790 425560 566700 576680 659770 655370 576630 566430 689440 536480 660480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3211899999.9999995 14165 2973 13392 27140;27141;27142;27143 21795;21796;21797 21797 3 9606 Homo sapiens 0.03711028598536359 IYGESADAVKK Unmodified 1179.6136 0.61355299 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;P51114-3;B4DM21;B4DM78;B4DGH9;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 1 6.67 0.471 1 2 44.216 44.303 3 0.00038999 11374 20230619_1886_Aki_TMTPro18x_K_F6 99.539 67.321 174900 133990 176670 162660 218180 232180 206130 209570 238990 222250 234190 224580 268110 176860 216110 212180 257860 192210 161670 122940 179850 162870 222970 229010 209560 215890 241470 224030 241880 226260 269760 186080 222910 211590 245860 183010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 387260000 14166 1029 13393 27144;27145;27146 21798;21799 21798 2 9606 Homo sapiens 0.030930759522561857 IYGFYDECK Unmodified 1193.5063 0.50631073 3705;3704;685 V9HW04;P62140;A0A8V8TQ71;B4DJ75;B7ZB67;H0Y3Y6;B4E163;P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;B3KXM2;P62136-3;A0A024RBP2;F8W0W8;P36873;P36873-2;Q9UPN1;F8VYE8;F8VR82 HEL-S-80p;PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 5.8 0.748 2 2 1 55.827 55.895 2;3 9.1558E-06 16134 20230619_1887_Aki_TMTPro18x_K_F7 175.38 155.59 689330 500430 575870 684300 571410 738240 679150 695300 802950 790140 766860 780710 890650 739570 745860 938890 862660 857830 636080 459850 595160 676390 598060 741010 682400 715810 809790 793300 793920 791820 898190 774780 768500 935210 824220 815650 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1338000000 14167 3705;3704;685 13394 27147;27148;27149;27150;27151 21800;21801;21802;21803 21803 4 9606 Homo sapiens -0.08270217253630108 IYGISFPDPK Unmodified 1135.5914 0.59136099 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 1.5 0.5 2 2 61.363 61.368 2;3 0.00042487 19015 20230619_1880_Aki_TMTPro18x_K_F1 106.2 78.186 423480 392860 449970 477080 365150 437830 473760 444300 458270 590220 591850 598490 564210 484340 537020 622970 545280 597750 392110 360220 453840 474440 388950 445880 471130 457550 473540 588580 599840 603240 575350 510650 547530 622150 522000 567820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1008999999.9999999 14168 2326 13395 27152;27153;27154;27155 21804;21805 21804 2 9606 Homo sapiens 0.028988962745188473 IYHPNIDEK Unmodified 1127.5611 0.56112349 3099 I1SRC5;A0A8Q3WL22;A8K4W8;A0A024R1A4;P68036;P68036-3;A0A1B0GUS4;P68036-2 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 0 0 6 0 1 42.226 42.32 3 0.00070295 10461 20230619_1886_Aki_TMTPro18x_K_F6 105.98 53.98 115060 68479 112370 117190 132370 131290 124190 141630 158180 166380 168340 164720 177540 151040 136980 192680 182570 172040 106190 63160 114680 114480 135630 131890 126800 144550 159720 166750 172560 166890 179020 158430 142820 191640 174170 163660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202380000 14169 3099 13396 27156 21806 21806 1 9606 Homo sapiens 0.0024453760931919533 IYHPNVDK Unmodified 984.50288 0.50288033 3689 V9HW41;P61088;F8VSD4;F8VQQ8;F8VV71;Q5JXB2 HEL-S-71;UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like yes no 0 0 0 7 0.816 1 1 1 39.619 39.667 3 0.00052782 9060 20230619_1887_Aki_TMTPro18x_K_F7 135.79 82.237 389200 213190 386240 398880 437660 448630 397050 433730 507940 419540 482760 492290 474830 443660 395090 381040 600060 499640 359120 196970 393360 387940 449360 449310 406300 443680 509930 427160 496080 494610 481570 455910 414310 390690 571450 473670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2524900000 14170 3689 13397 27157;27158;27159 21807;21808;21809 21807 3 9606 Homo sapiens 0.010009007547068904 IYIDSNNNPER Unmodified 1333.6262 0.62624295 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 3 0.816 1 1 1 43.198 43.262 2 5.5817E-09 11023 20230619_1882_Aki_TMTPro18x_K_F3 223.87 194.71 523310 395650 477610 518670 551490 617530 615980 608080 704140 694430 729470 737930 802480 642270 639730 795090 788920 747870 483310 363340 490410 514930 568950 616630 619990 624090 713480 698520 750330 744020 808790 673840 662450 793480 753100 710990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 909130000 14171 826 13398 27160;27161;27162 21810;21811 21810 2 9606 Homo sapiens -0.027225126554640156 IYIGDQVQK Unmodified 1062.571 0.5709599 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8 XPO7 Exportin-7 yes no 0 0 0 6.5 0.5 1 1 50.436 50.515 2 1.0675E-05 13806 20230619_1887_Aki_TMTPro18x_K_F7 172.21 105.18 197670 151660 168270 179690 191560 211030 194400 193970 228340 250890 272770 292080 286150 238870 228010 314220 316220 292320 182480 139120 173790 179590 197320 210660 196940 200860 232590 251710 278410 292850 288900 252090 238220 313070 301540 277970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220910000 14172 2083 13399 27163;27164 21812;21813 21813 2 9606 Homo sapiens 0.04217725614716983 IYIPLPEPHAR Unmodified 1304.7241 0.7241065 195 A8K5D8;A8K4G7;A0A024R2C5;O75351 VPS4B Vacuolar protein sorting-associated protein 4B yes no 0 0 0 1 0 1 52.358 52.358 3 6.9308E-05 15334 20230619_1880_Aki_TMTPro18x_K_F1 99.973 79.943 14478 12562 15905 16322 13274 16511 15872 15033 19640 17102 19686 17033 16522 15849 18429 19221 17130 21282 13403 11529 16003 16176 14081 16643 15974 15522 19781 17180 20042 17269 17064 16563 18642 19374 16431 20177 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23245000 14173 195 13400 27165 21814 21814 1 9606 Homo sapiens 0.08393340731163335 IYLSCLEELMK Unmodified 1397.6935 0.69345957 3937 Q15645 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 0 0 0 8 0 1 64.963 64.982 2 0.0057904 19952 20230619_1888_Aki_TMTPro18x_K_F8 99.802 69.993 11250 7745.3 10509 10175 8007.7 12002 9438.9 10707 8844.6 13441 8839 11546 15568 12909 10105 14232 16285 15678 10386 7115.8 10699 10100 8578.4 11958 9426.8 11095 9079.6 13373 9379.6 11842 15420 13349 10733 14349 15517 14878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11094000 14174 3937 13401 27166 21815 21815 1 9606 Homo sapiens 0.010520582395884048 IYNDDKNTYIR Unmodified 1413.6888 0.6888432 3309 O75533;Q9NTB4 SF3B1;DKFZp434M052 Splicing factor 3B subunit 1 yes no 0 0 1 7 0 1 44.178 44.261 3 0.04344 11028 20230619_1887_Aki_TMTPro18x_K_F7 52.495 35.553 72890 62509 91311 87450 113350 86868 108590 87004 78267 76314 100590 49182 49935 34376 131280 38317 48734 38637 67560 57418 91495 86260 115410 87977 108820 88655 82280 76844 99751 50792 56268 36225 126990 38765 47356 36732 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49812000 14175 3309 13402 27167 21816 21816 1 9606 Homo sapiens -0.0014536658727593021 IYNSIYIGSQDALIAHYPR Unmodified 2193.1219 0.12185306 3309 O75533;Q9NTB4 SF3B1;DKFZp434M052 Splicing factor 3B subunit 1 yes no 0 0 0 3 0 1 60.544 60.573 3 7.993600000000001E-25 18655 20230619_1882_Aki_TMTPro18x_K_F3 206.63 194.49 32971 27391 36242 37922 33044 43803 39958 38381 35622 40707 38074 40972 45446 34336 35175 34672 40484 46228 30516 25160 36518 37497 34791 43695 39766 39653 36671 41010 39289 41324 45629 35698 36239 35486 38723 43764 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67511000 14176 3309 13403 27168 21817 21817 1 9606 Homo sapiens 0.07301700289463042 IYPEEMIQTGISAIDGMNSIAR Unmodified 2408.1716 0.17158172 1233 A0A140VK65;P21281;Q59HF3;B4DFM5;H0YC04 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 7.5 0.5 1 1 66.12 66.139 3 1.4253E-38 20433 20230619_1888_Aki_TMTPro18x_K_F8 241.13 219.53 3596.7 3506.2 4650.6 4768.1 7122.9 4941.3 6534.4 6817.2 4628.1 4908.2 5998.4 7401.8 7800.5 6154.7 6968.9 6379.2 7679.7 6290.6 3337.8 3218.2 4672 4715.7 7154.5 5032.6 6565.2 6783.1 4881.9 5132.8 6180.9 7357 7860.9 6401.2 7135.9 6405.5 7331.4 5980.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36693000 14177 1233 13404 27169;27170 21818;21819 21819 2 9606 Homo sapiens 0.023822791209568095 IYPSREEYEAHQDR Unmodified 1791.8176 0.81762554 1303 B4DVB5;A0A1U9X8F2;A0A1U9X8F1;Q06587;A0A024RCR9;B4DW57;Q06587-2 RING1 E3 ubiquitin-protein ligase RING1 yes no 0 0 1 2.8 0.748 2 2 1 34.669 34.726 3;4 7.7728E-07 7465 20230619_1882_Aki_TMTPro18x_K_F3 139.34 27.223 59009 46758 57816 65506 65889 75100 61048 65244 74137 70972 89259 76945 91716 73522 76528 86359 88331 89318 54544 42963 58996 64706 67713 74965 62275 67482 75371 71623 90871 77807 92771 76657 78792 86715 84407 84800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 302250000 14178 1303 13405 27171;27172;27173;27174;27175 21820;21821 21821 2 9606 Homo sapiens -0.04661056414988707 IYPTFLHLHGK Unmodified 1324.7292 0.72919187 315 A0A024R4Z6;Q08945;E9PMD4 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 5 0.816 1 1 1 50.966 51.027 4 3.1522E-06 14357 20230619_1886_Aki_TMTPro18x_K_F6 153.12 129.37 334800 270970 336280 355070 274720 345800 339080 335170 397280 372210 337490 316270 354070 298090 350870 347490 349790 363090 309570 248770 340710 351530 292340 350010 340040 344200 399080 372570 349730 322990 360680 310830 356770 349300 334780 344650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1284500000 14179 315 13406 27176;27177;27178 21822;21823 21823 2 9606 Homo sapiens 0.07981644593769488 IYPVTEIQEAHK Unmodified 1426.7456 0.7456298 3992 Q53FA7;B4DMQ7 TP53I3 Quinone oxidoreductase PIG3 yes no 0 0 0 5.5 0.5 1 1 49.472 49.549 3 8.235499999999999E-19 13687 20230619_1886_Aki_TMTPro18x_K_F6 240.6 219.04 189970 135180 159640 179520 174280 218140 168940 177360 186560 211330 216670 256220 228260 201620 226820 229670 249960 217850 175280 124190 165040 178080 180030 216630 171290 184920 190430 213070 221710 256050 232590 211160 231950 229720 238720 207160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 350690000 14180 3992 13407 27179;27180 21824 21824 1 9606 Homo sapiens 0.049326809692274765 IYQDAYR Unmodified 927.44503 0.4450311 2871 Q6LES8;E5KSX8;E5KSU5;Q00059;H7BYN3;Q00059-2 TFAM Transcription factor A, mitochondrial yes no 0 0 0 5.5 0.5 1 1 41.202 41.292 2 0.0043317 10043 20230619_1885_Aki_TMTPro18x_K_F5 148.98 121.85 354190 275540 321120 323920 414430 429960 392790 408270 476050 281120 302320 226030 224850 187490 333530 243780 262570 146830 327160 252730 330350 324620 422480 426290 399750 415020 472690 289580 314650 231010 237090 197550 332790 239010 251110 140910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 291280000 14181 2871 13408 27181;27182 21825 21825 1 9606 Homo sapiens -0.02159361170720331 IYQGEELPHPK Unmodified 1309.6667 0.6666512 4257;1121 Q8NHH9-2;Q8NHH9;B7Z2H0;B5MCN0;Q8NHH9-3;Q8NHH9-5;Q8NHH9-4;B7Z8V5;A0A0S2Z5B4;Q6IAK1;A0A0S2Z5A2;Q53F53;A0A0S2Z5B0;Q8WXF7-2;Q8WXF7;A0A804HLC1 ATL2;SPG3A;ATL1 Atlastin-2;Atlastin-1 no no 0 0 0 5 0 1 45.275 45.353 3 2.3499E-05 11835 20230619_1885_Aki_TMTPro18x_K_F5 114.71 81.301 165820 139030 144600 171090 135830 146940 170500 176850 180190 233760 202720 216980 237460 199070 190180 248070 237100 268790 153190 127540 148690 169850 142720 151140 170260 180110 184230 232550 208520 220360 239020 208620 197140 249470 226630 254970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178100000 14182 4257;1121 13409 27183 21826 21826 1 9606 Homo sapiens 0.02420453734930561 IYQGTLGAIK Unmodified 1062.6073 0.6073454 2814 D3DS96;Q9NRL2-2;Q9NRL2;Q59G54 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 0 0 0 3 0 1 54.487 54.534 3 0.0022671 16167 20230619_1882_Aki_TMTPro18x_K_F3 92.538 53.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14183 2814 13410 27184 21827 21827 1 9606 Homo sapiens 0.07854602511406483 IYQHVINK Unmodified 1013.5658 0.56581494 701 Q9NRF8;A0A024RC00 CTPS2 CTP synthase 2;CTP synthase yes no 0 0 0 3 0 1 43.155 43.221 3 0.0071678 11007 20230619_1882_Aki_TMTPro18x_K_F3 85.642 55.138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14184 701 13411 27185 21828 21828 1 9606 Homo sapiens 0.05957466542747625 IYQIYEGTSQIQR Unmodified 1597.81 0.81002097 1063 P11310-2;P11310;Q5HYG7;Q5T4U5;A0A0S2Z366;B4DWX6;B7Z9I1;F6YB23;A0A7P0T932;A0A7P0T8G6;B4DJE7;A0A7P0TB55;B4DVB1 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 8 0 1 54.161 54.232 2 4.0836E-06 15354 20230619_1888_Aki_TMTPro18x_K_F8 141.44 111.19 60161 56550 56827 62531 72710 65293 73747 68822 71119 69843 74485 71344 79342 66498 80012 78392 70157 86740 55655 51804 58266 62718 74159 65956 74204 70107 72755 70573 76481 72226 80829 69407 80804 79058 67336 82237 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141050000 14185 1063 13412 27186 21829 21829 1 9606 Homo sapiens 0.03502836055395164 IYQLLAK Unmodified 847.51674 0.51673948 2356 B4E0B7;B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 4.5 0.5 1 1 60.49 60.517 2 0.0046883 18115 20230619_1885_Aki_TMTPro18x_K_F5 146.58 60.73 232130 188800 215410 215680 205840 256640 227090 221990 290830 172240 167500 131690 160650 117590 204700 179230 155530 119370 214510 173100 220100 216190 215510 255560 229660 227850 287380 175770 177220 135280 166150 125050 204510 175870 149040 114150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48978000 14186 2356 13413 27187;27188 21830;21831 21831 2 9606 Homo sapiens 0.08688178253805745 IYQNIQDGSLDLNAAESGVQHKPSAPQGGR Unmodified 3149.549 0.54900226 492 A0A024R845;P61106;A0A994J451 RAB14 Ras-related protein Rab-14 yes no 0 0 1 7 0 1 52.193 52.267 4 1.5898E-39 14598 20230619_1887_Aki_TMTPro18x_K_F7 199.31 167.54 40339 36882 42112 52553 36033 45409 42561 44449 39069 49320 46595 54454 50683 43599 48467 48454 47195 52773 37341 33877 42608 51662 38106 46413 42460 45628 40356 49706 47697 54636 51486 45589 49255 48861 45206 50058 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 451270000 14187 492 13414 27189 21832 21832 1 9606 Homo sapiens 0.06020972125907065 IYQYVINK Unmodified 1039.5702 0.57023162 3468 P17812;A0A3B3IRI2;A0A8Q3WKZ7;B4DMB5;A0A8Q3WL40;A0A3B3IRQ8;A0A3B3ITF6;A0A3B3ITB8;B7Z9C4;A0A3B3ITH9 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 3.5 0.5 2 2 57.187 57.207 2;3 0.00065724 17286 20230619_1882_Aki_TMTPro18x_K_F3 174.21 129.13 203380 172140 191210 209430 185140 228060 196080 188350 233370 166130 158380 127950 146130 117010 198370 163060 171650 144250 188010 157890 195280 208650 193350 228240 198210 194630 232460 168100 165400 131410 151980 123550 199120 162190 164310 137310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 423650000 14188 3468 13415 27190;27191;27192;27193 21833;21834 21833 2 9606 Homo sapiens 0.05202930965674568 IYSFNSTNDSSGPANLDK Unmodified 1928.8752 0.8752 4168 Q7Z478 DHX29 ATP-dependent RNA helicase DHX29 yes yes 0 0 0 6.5 0.5 1 1 54.773 54.843 3 9.7745E-10 15965 20230619_1886_Aki_TMTPro18x_K_F6 135.95 125.31 26145 26318 29397 29968 25779 30105 31448 32744 34984 33750 36047 37597 44844 36282 35194 45344 39683 39905 24235 24111 29545 29980 27219 30495 31502 33295 35486 34173 37324 37969 45019 37945 36261 45089 37926 37959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53991000 14189 4168 13416 27194;27195 21835 21835 1 9606 Homo sapiens -0.05208259000073667 IYSHSLLPVLR Unmodified 1296.7554 0.75540662 3488 Q3B7A7;Q59HH3;P22102;B4DJ93 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 5.5 0.5 1 1 53.352 53.427 3 3.1954E-18 15347 20230619_1886_Aki_TMTPro18x_K_F6 241.4 177.13 106490 95059 103550 108770 143810 113890 113450 122020 127560 114110 103890 98598 108370 101720 110120 121310 124360 105420 98502 87123 106000 108830 145040 115110 116610 123850 128280 115290 107890 100960 110640 105810 112780 120680 118720 100370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 656370000 14190 3488 13417 27196;27197 21836;21837 21837 2 9606 Homo sapiens 0.11889913765276106 IYSSNSGPTR Unmodified 1080.52 0.51998696 8 H6WA52;F6KD01;A0A8I5KSF9;A0A1V0DNR7;A0A6G6A825;A0A386NCS8;F6KCZ4;H6WA51;F6KCZ5;F6KD02;O43460;F6KCZ3;A0A8V8TQX2;A0A087X033;A0A8V8TPK6;A0A024QYR6;P60484;P60484-2 PTEN;PTH2 Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN yes no 0 0 0 7.5 0.5 1 1 35.205 35.194 2 9.6355E-10 7580 20230619_1888_Aki_TMTPro18x_K_F8 210.6 195.38 31525 13442 35252 24513 40759 43255 37249 41932 40022 23133 40007 34483 31532 30738 37534 15802 44985 33833 29092 12434 35516 24099 41781 42260 37870 42393 40528 24756 40653 34376 32768 31045 38344 17207 42892 31985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24927000 14191 8 13418 27198;27199 21838;21839 21839 2 9606 Homo sapiens -0.017052234301445424 IYSTCTDFER Unmodified 1290.5551 0.55505184 3291 O75061-4;O75061;O75061-2;S4R305;O75061-3 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes no 0 0 0 4 0 1 46.901 46.943 2 1.5613E-06 12590 20230619_1883_Aki_TMTPro18x_K_F4 171.46 169.8 85757 79259 77820 87892 65228 65907 77432 88237 98577 107800 113700 116350 125920 122580 102820 125320 131170 145800 79300 72613 79568 87815 69081 68882 78086 89121 99875 108140 116470 117950 127150 126350 106650 126980 125330 138210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149050000 14192 3291 13419 27200 21840 21840 1 9606 Homo sapiens -0.07860348684516794 IYSYVVSRPQPR Unmodified 1463.7885 0.78849767 4333 Q96CS3;B4E2M8 FAF2 FAS-associated factor 2 yes no 0 0 1 8 0 1 45.326 45.354 3 4.1345E-13 11602 20230619_1888_Aki_TMTPro18x_K_F8 203.11 129.13 100800 83495 88255 99147 98391 113130 115440 118210 130430 54009 63272 40750 44244 38299 70906 59086 65645 39066 93114 76572 90933 99040 101930 113430 115820 118690 129050 57744 67150 42060 47070 40663 71269 57966 62675 37415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73778000 14193 4333 13420 27201 21841 21841 1 9606 Homo sapiens 0.07515495817324336 IYTFNQSR Unmodified 1027.5087 0.50869399 1248 Q16851-2;A0A140VKE1;A0A7I2YQ74;Q16851;E7EUC7;B4DUP2;A0A087WYS1;B2RAN1;Q53QE9;D6W5E6;A0A7I2V676;C9JNZ1;A0A7I2V4T0 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes no 0 0 0 3 0 1 45.439 45.515 2 0.00056982 12085 20230619_1882_Aki_TMTPro18x_K_F3 161.02 142.24 174680 155170 157280 159060 174430 196300 193950 178760 210360 98903 101100 80832 94242 76483 146050 105960 115340 83837 161470 142080 161500 160890 180420 195320 194810 181730 208650 103910 108570 82915 98876 80597 145670 104900 110430 79979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78366000 14194 1248 13421 27202 21842 21842 1 9606 Homo sapiens -0.003960007336445415 IYVASVHQDLSDDDIK Unmodified 1816.8843 0.88430813 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8;A0A0J9YVR6;A0A0J9YWM1;E9PN18 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 0 0 5.5 0.5 1 1 52.699 52.773 3 2.3568E-12 15099 20230619_1886_Aki_TMTPro18x_K_F6 169.09 141.24 53983 44925 53893 57603 51402 74340 56456 57910 65808 62495 63339 63951 67093 56827 63411 67547 67498 65575 49922 41231 54759 57329 53875 73472 56939 60412 66419 62980 65275 64618 68183 59419 64792 67590 64529 62311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144070000 14195 1044 13422 27203;27204 21843 21843 1 9606 Homo sapiens 0.00854134356245595 IYVGNLPPDIR Unmodified 1255.6925 0.69247202 3140 J3KTL2;Q07955;Q59FA2;Q07955-3;Q07955-2;A8K1L8;J3QQV5;J3KSW7 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 3.67 3.09 1 1 1 55.808 55.817 2;3 0.00016223 16421 20230619_1888_Aki_TMTPro18x_K_F8 88.155 64.929 89430 73127 89558 97333 84165 99327 90839 90085 109240 112420 106730 107730 116280 99253 116370 127180 109370 130580 82694 67145 90933 96310 88103 100060 91802 93285 110210 112290 110070 109300 118370 104160 118020 127500 104860 123910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 243650000 14196 3140 13423 27205;27206;27207 21844;21845;21846 21846 3 9606 Homo sapiens 0.07485347977217316 IYVGNLPTDVR Unmodified 1245.6717 0.67173657 3844 Q13242;A8K3M9;H0YIB4;S4R3G0;B4DFT9 SRSF9 Serine/arginine-rich splicing factor 9 yes no 0 0 0 7.5 0.5 1 1 53.907 53.976 2 0.00015189 15246 20230619_1888_Aki_TMTPro18x_K_F8 161.27 133.16 821680 650240 733310 935200 754930 873740 862030 914950 931170 1007500 1036800 1103500 1077600 973110 1090100 1166500 1079300 1303100 758950 597650 753880 919740 785830 888790 865400 934460 949380 1015900 1061300 1111500 1099400 1018300 1108200 1176500 1034400 1235400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1258900000 14197 3844 13424 27208;27209 21847;21848 21848 2 9606 Homo sapiens 0.05872757597535383 IYVISLAEPR Unmodified 1159.6601 0.66010926 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53R85;C9J7S3;C9JLC1;C9JQM9 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 59.921 59.942 2 1.5684E-06 18579 20230619_1881_Aki_TMTPro18x_K_F2 171.36 128.9 201800 170600 180050 188690 167080 192660 195730 204070 212630 230890 222540 218900 247770 196560 226360 265500 241600 264640 186470 156340 184580 189220 175460 194820 196290 208370 216200 231480 228960 222090 250970 207240 231630 265520 231180 251280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 205330000 14198 1207 13425 27210;27211 21849 21849 1 9606 Homo sapiens 0.0866656057421551 IYVMATHGILSAEAPR Unmodified 1727.9029 0.9028755 527 B4DP31;A0A024R8M4;Q14558;Q14558-2;C9J168 PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 1 yes no 0 0 0 2.5 0.5 1 1 56.421 56.448 3 2.9042E-08 16952 20230619_1882_Aki_TMTPro18x_K_F3 132.84 109.09 101550 86739 108810 111080 98906 115030 119490 106860 139640 122960 117110 110880 126120 105480 108340 130690 129300 133430 93978 79599 109810 110230 104110 115820 119890 110210 140190 123100 121560 112960 127600 110350 111760 131010 123540 126690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 195550000 14199 527 13426 27212;27213 21850;21851 21851 2 9606 Homo sapiens 0.06804017517129068 IYVVQPK Unmodified 845.50109 0.50108942 3273 O60271;O60271-4;O60271-2;O60271-9;B4DS36;Q5JB53;Q719J0 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 0 3 0 1 49.516 49.594 3 0.0392 13927 20230619_1882_Aki_TMTPro18x_K_F3 64.866 29.766 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14200 3273 13427 27214 21852 21852 1 9606 Homo sapiens 0.07215891736757385 IYWGTATTGKPHVAYFVPMSK Oxidation (M) 2369.1878 0.18782413 1102 A0A0S2Z4R1;P54577;A0A0C4DGZ5;A0A6Q8PFX4;A0A6Q8PFC1;A0A6Q8PF15 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 1 1 7 0 1 56.191 56.249 4 2.7819E-05 16190 20230619_1887_Aki_TMTPro18x_K_F7 95.5 76.455 28215 29012 33923 33236 29028 29264 31586 29006 29369 36758 34469 28697 31059 23061 37406 28655 27585 25687 26175 26578 33902 33180 30558 29909 31651 29873 30286 36468 34956 29306 32068 24289 37335 28572 26475 24436 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42106000 14201 1102 13428 27215 21853 21853 677 1 9606 Homo sapiens 0.05799773140006437 IYYHVVETGSMGAR Oxidation (M) 1597.7559 0.75587691 9 B3KSG9;A0A024QYR8;Q99805 TM9SF2 Transmembrane 9 superfamily member 2 yes no 0 1 0 8 0 1 42.796 42.799 3 0.0022558 10599 20230619_1888_Aki_TMTPro18x_K_F8 71.513 60.569 24139 24103 25667 26848 30623 31337 34759 30381 34625 27746 31119 28512 35860 24816 26905 37125 33257 35258 22363 22077 26031 26956 31492 31338 34785 31043 35122 28218 32278 28823 35991 26395 27925 36969 31772 33501 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127490000 14202 9 13429 27216 21854 21854 3 1 9606 Homo sapiens -0.019090793678742557 IYYSEETSSDQGNEDEEEPK Unmodified 2347.9452 0.94518964 3477 P19174;P19174-2;Q4LE43;B4DMA3 PLCG1;PLCG1 variant protein 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1;Phosphoinositide phospholipase C yes no 0 0 0 1 0 1 48.487 48.487 3 1.3013E-29 13749 20230619_1880_Aki_TMTPro18x_K_F1 197.49 191.83 19346 16249 14052 18465 14530 22137 16114 17934 27659 28460 27901 43397 41291 39893 18512 61234 51195 57145 17851 14895 14755 18507 15184 21999 16514 18895 27556 28665 29270 43265 40711 42352 21268 60821 48708 54299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38654000 14203 3477 13430 27217 21855 21855 1 9606 Homo sapiens -0.17486514703387002 KAAAEDVNVTFEDQQK Unmodified 1791.8639 0.86390703 4575 Q9NQP4;E9PQY2;B2R548 PFDN4 Prefoldin subunit 4 yes no 0 0 1 4.5 0.5 1 1 47.251 47.328 3 0.00014809 12729 20230619_1883_Aki_TMTPro18x_K_F4 89.311 65.983 17051 14467 16061 17149 17077 18426 17172 15712 14432 18752 18948 19889 18355 14874 19951 16277 15626 11636 15762 13267 16418 17115 17650 18478 17231 16329 15060 18812 19217 19954 18813 15575 19999 16094 14965 11116 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20658000 14204 4575 13431 27218;27219 21856;21857 21856 2 9606 Homo sapiens -0.00035036303574997874 KAAAPAPEEEMDECEQALAAEPK Unmodified 2484.1149 0.1148547 3510 Q53YD7;P26641;P26641-2;Q2F840 EEF1G Elongation factor 1-gamma yes no 0 0 1 2 0.816 1 1 1 51.832 51.867 4 1.1636E-13 14988 20230619_1882_Aki_TMTPro18x_K_F3 141.1 120.66 102410 102900 123140 101000 106310 112560 122030 113590 78642 111390 118020 66813 83282 54952 149600 67841 58238 53808 94985 94152 122970 102440 111950 113040 120890 115900 84238 111220 117530 69567 89002 57856 145470 67458 56575 51272 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 298690000 14205 3510 13432 27220;27221;27222 21858;21859 21859 2 9606 Homo sapiens -0.0678381322622954 KADEVLEILK Unmodified 1156.6703 0.67033959 3312 O75643;A4FU77;A0A494C1A5;O75643-2 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 1 7 0 1 59.236 59.285 3 0.00010178 17506 20230619_1887_Aki_TMTPro18x_K_F7 110.07 53.974 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14206 3312 13433 27223 21860 21860 1 9606 Homo sapiens 0.09827123508785007 KADIDLTK Unmodified 902.5073 0.50729701 3710 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 1 6 0 1 44.928 45.017 3 0.0037265 11701 20230619_1886_Aki_TMTPro18x_K_F6 86.898 40.436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14207 3710 13434 27224 21861 21861 1 9606 Homo sapiens 0.05214365177596392 KADIGVAMGIAGSDVSK Oxidation (M) 1633.8345 0.83452116 3387;959 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z1Q9;B7Z3F8;B3KV59;B3KSY7;P05023;P05023-4;P05023-3;B7Z3V1;B7Z1N5 ATP1A3;ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 1 1 7.5 0.5 1 1 48.729 48.805 3 0.0050831 12987 20230619_1888_Aki_TMTPro18x_K_F8 79.511 52.482 36370 27380 27474 48204 50629 44030 49264 43899 50198 52777 61457 51950 55083 39711 53476 58154 49855 62300 33546 25237 29118 46846 50636 44841 49745 45124 51541 52824 62184 52407 56279 42387 54240 58353 47822 59083 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77661000 14208 959;3387 13435 27225;27226 21862 21862 538 1 9606 Homo sapiens 0.042957281465533015 KADNVVNIAR Unmodified 1098.6146 0.61455605 4301 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 1 4.5 3.5 1 1 39.944 39.939 3 0.00048365 9446 20230619_1888_Aki_TMTPro18x_K_F8 106.62 79.52 334450 253700 306830 320960 376560 381980 343780 331940 440740 354830 404120 384170 394600 315240 340510 431560 420510 347610 308910 232900 315060 319370 384710 380570 351490 343220 441810 358490 415710 386580 400420 333520 352100 426870 401060 331320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 233380000 14209 4301 13436 27227;27228 21863;21864 21864 2 9606 Homo sapiens 0.06919335111842884 KADTTTPTTSAITASR Unmodified 1620.8319 0.83187862 517 A0A024R8H6;Q15059;A0A140F1N4;Q15059-2 BRD3 Bromodomain-containing protein 3 yes no 0 0 1 8 0 1 38.27 38.256 3 5.3137E-08 8786 20230619_1888_Aki_TMTPro18x_K_F8 125.41 111.66 32514 26368 37100 35518 38352 37476 37497 31892 40857 47182 55082 49222 44847 41831 49697 46033 51242 43438 30098 24215 37307 35140 39662 37634 37973 33398 42011 46923 55366 49630 46343 43592 50513 46068 48959 41314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39489000 14210 517 13437 27229 21865 21865 1 9606 Homo sapiens 0.0462959601327384 KADVEEEFLAFR Unmodified 1452.7249 0.72489436 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 1 4 0 1 58.17 58.174 3 0.0008495 17577 20230619_1883_Aki_TMTPro18x_K_F4 91.307 62.563 138510 102460 125300 122680 82440 109450 107800 99012 122850 146490 137400 109030 154540 118470 119780 149590 123600 131550 127900 94015 127720 122100 89903 111430 107770 103190 125010 144370 140800 112800 155410 123620 122790 148730 118280 125110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43733000 14211 3588 13438 27230 21866 21866 1 9606 Homo sapiens 0.016640905895656033 KADVIVLAGTVCDFR Unmodified 1662.8763 0.8763264 1903 A1L0T0;M0R026;Q59GP4;M0QZX5 ILVBL Acetolactate synthase-like protein yes no 0 0 1 1.5 0.5 1 1 59.75 59.756 3 1.4466E-10 18471 20230619_1881_Aki_TMTPro18x_K_F2 154.51 135.44 84203 66675 75904 73730 70852 70995 71388 61135 83810 88845 85247 93650 93135 86118 104610 113630 102850 128870 77781 61116 77683 73876 73991 71833 72348 63934 84798 88469 87842 94599 95402 90535 106140 114560 98602 122140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125660000 14212 1903 13439 27231;27232 21867 21867 1 9606 Homo sapiens 0.07140328625746406 KAEAAASALADADADLEER Unmodified 1915.9123 0.91231379 303 A0A024R4S0;M0R1T5;O43633 CHMP2A Charged multivesicular body protein 2a yes no 0 0 1 1 0 1 55.254 55.254 3 3.8954E-12 16525 20230619_1880_Aki_TMTPro18x_K_F1 133.93 119.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14213 303 13440 27233 21868 21868 1 9606 Homo sapiens -0.00900587454361812 KAEAGAGSATEFQFR Unmodified 1568.7583 0.75831975 3594 P46783;Q59GE4;Q9NQ39 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like yes no 0 0 1 7 0.816 1 1 1 44.393 44.457 3 0.00087136 11488 20230619_1886_Aki_TMTPro18x_K_F6 79.837 68.044 240660 218880 257340 264190 223780 276080 278850 246880 309260 301530 294590 284830 293100 263530 270050 307050 311150 336510 222820 200700 259610 263260 236750 277570 278890 255820 312770 301380 302810 289190 298230 274870 277490 309400 297490 319220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7424599999.999999 14214 3594 13441 27234;27235;27236 21869 21869 1 9606 Homo sapiens -0.0033090763854488614 KAEAVVNTVDISER Unmodified 1529.8049 0.80493559 2518 B4DKU3;Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 0 0 1 4.5 0.5 1 1 46.759 46.819 3 1.5758E-12 12389 20230619_1885_Aki_TMTPro18x_K_F5 191.96 175.71 175250 123460 164620 161680 155900 222030 195790 191150 203510 205840 197270 215020 249560 192100 170590 242950 224810 242950 161830 113410 168040 160910 164090 219060 195350 197760 206740 207540 205030 217090 249190 201700 178250 243100 214690 230690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 500290000 14215 2518 13442 27237;27238 21870 21870 1 9606 Homo sapiens 0.061225321927622645 KAEEIANEMIEAAK Unmodified 1545.7709 0.77085827 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 1 6 0 1 61.194 61.249 4 3.9061E-07 18665 20230619_1886_Aki_TMTPro18x_K_F6 140.1 91.444 53686 46898 50441 61844 43501 50534 52061 47516 60839 70706 64079 89570 73817 62833 68470 79294 78818 87472 49638 43047 51474 61057 46001 51890 52276 49428 61682 70758 66199 89052 74786 66561 70352 79843 75372 82963 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31718000 14216 1637 13443 27239 21871 21871 1 9606 Homo sapiens 0.019803677094841987 KAEELDRR Unmodified 1015.5411 0.54105675 3224 Q6FHJ5;O14828-2;O14828 SCAMP3 Secretory carrier-associated membrane protein 3 yes no 0 0 2 4.5 0.5 1 1 30.608 30.68 4 0.00086393 5793 20230619_1883_Aki_TMTPro18x_K_F4 128.93 95.047 79923 38336 120110 114010 171480 144890 127310 153930 103140 80071 135090 130550 94857 89407 149410 34526 115090 85607 74019 35764 119340 109200 172320 144310 130320 154580 107600 86347 135430 128780 100670 90674 148420 38846 110250 80876 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109200000 14217 3224 13444 27240;27241 21872 21872 1 9606 Homo sapiens 0.03390786669365298 KAEGAATEEEGTPK Unmodified 1416.6733 0.67325272 3759 P80723;P80723-2;U3KQP0 BASP1 Brain acid soluble protein 1 yes no 0 0 1 3 0.816 1 1 1 36.436 36.492 3;4 3.6741E-16 8162 20230619_1882_Aki_TMTPro18x_K_F3 196.93 168.65 69285 41615 90015 79923 95964 110160 64376 80472 67344 65296 113980 134840 87422 109570 106800 54794 128720 123900 64118 38446 89716 77893 98347 108330 66996 83852 70235 68922 113770 132720 91221 110850 109170 60007 122910 116970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150480000 14218 3759 13445 27242;27243;27244 21873;21874;21875 21874 3 9606 Homo sapiens -0.018416978949971963 KAEGGGGGGRPGAPAAGDGK Unmodified 1665.8183 0.81829425 3776 Q00839;B3KX72;Q96BA7 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 2 6.5 0.5 1 1 32.047 32.11 4 0.01769 6261 20230619_1887_Aki_TMTPro18x_K_F7 56.819 39.538 63513 27697 77900 81383 126860 164680 90405 126680 123060 83631 132990 184550 145160 154750 123440 65195 167160 166620 58667 25848 78721 78711 127140 159100 94365 130750 123780 89979 136830 181470 146970 155810 127970 72865 159510 157180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 340560000 14219 3776 13446 27245;27246 21876;21877 21877 2 9606 Homo sapiens 0.01201783024703218 KAEHLDFK Unmodified 986.51853 0.5185304 3613 P49792;A0A8V8TLN4;A0A8V8TLA0;A0A8V8TL79;A0A8V8TMX6;Q5JC45;Q5JC46 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 1 7 0 1 40.574 40.641 4 0.011134 9492 20230619_1887_Aki_TMTPro18x_K_F7 76.143 48.522 185150 140000 172140 187240 243220 234400 215080 206910 265900 234710 267580 254380 289580 227480 226260 285470 281150 243690 171020 128590 177070 185770 246090 232880 220020 214020 268040 236420 275250 256590 291750 238600 234530 283450 268210 232040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146630000 14220 3613 13447 27247 21878 21878 1 9606 Homo sapiens 0.024731872717552505 KAEIMESIK Unmodified 1047.5634 0.56343168 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 1 8 0 1 49.683 49.756 3 0.0010329 13396 20230619_1888_Aki_TMTPro18x_K_F8 99.752 52.933 95579 82797 87937 90864 91410 109380 103900 95922 126250 97298 99275 101310 107370 95896 95965 112590 110530 99921 88353 75864 90052 91368 95123 108900 104690 98983 126200 98468 103490 102510 108840 99936 98676 112130 105540 95078 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185590000 14221 1432 13448 27248 21879 21879 1 9606 Homo sapiens 0.041552500227680866 KAELLDNEK Unmodified 1058.5608 0.56078914 552 Q6NVY0;A0A024R904;Q9HB71;Q9HB71-3;B4DFD3;Q9HB71-2 CACYBP Calcyclin-binding protein yes no 0 0 1 4 0.816 1 1 1 44.249 44.314 3 0.0038603 11404 20230619_1883_Aki_TMTPro18x_K_F4 81.92 51.356 503580 306630 365450 439990 439170 545680 428530 465490 633710 630140 688730 920330 1001200 908450 479700 1099400 1286100 1193500 463850 282150 384320 434470 451320 541650 439110 485470 636540 637160 718510 920690 988450 947240 544780 1105000 1222100 1132900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 983340000 14222 552 13449 27249;27250;27251 21880 21880 1 9606 Homo sapiens 0.03385117889456524 KAELLDNEKPAAVVAPITTGYTVK Unmodified 2527.3898 0.38975464 552 Q6NVY0;A0A024R904;Q9HB71;Q9HB71-3;B4DFD3 CACYBP Calcyclin-binding protein yes no 0 0 2 2 0 1 57.056 57.072 4 0.0045391 17445 20230619_1881_Aki_TMTPro18x_K_F2 66.868 53.811 18010 14590 17845 17897 16757 19174 16968 14630 15751 20265 19274 14969 17293 13152 19911 11222 10952 10725 16651 13385 18123 17817 17497 19191 17067 15419 16279 20013 19502 15365 17809 13537 19659 11314 10564 10192 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55765000 14223 552 13450 27252 21881 21881 1 9606 Homo sapiens 0.18715535306546371 KAEPSEVDMNSPK Unmodified 1430.6711 0.67114423 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q3SWU7 DDX21 Nucleolar RNA helicase 2 yes no 0 0 1 4.5 0.5 1 1 41.52 41.563 3 6.8526E-06 10254 20230619_1883_Aki_TMTPro18x_K_F4 122.45 93.815 44649 31222 35479 46626 39624 41904 41317 44779 59074 51053 50611 60384 60814 62407 42542 72050 66201 78801 41178 28724 36929 45731 40918 42789 42108 45724 58834 51573 52811 60947 60981 64775 45055 72532 63199 74728 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165030000 14224 1748 13451 27253;27254 21882;21883 21882 2 9606 Homo sapiens -0.026964499044652257 KAEQLMSDENCFK Unmodified 1598.7069 0.70687781 1882 A0A994J7C7;Q96ST3;A0A994J7C5;B3KQE3 SIN3A Paired amphipathic helix protein Sin3a yes no 0 0 1 6 0 1 50.268 50.345 3 9.603E-05 14061 20230619_1886_Aki_TMTPro18x_K_F6 105.03 94.69 33898 30853 35263 36804 33658 37971 36500 33255 37631 41972 48239 32818 42298 34787 45441 35434 39474 37568 31377 28286 35692 36696 35162 38207 36687 34544 38701 41677 48639 33839 43480 35876 45767 35754 37813 35667 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18002000 14225 1882 13452 27255 21884 21884 1 9606 Homo sapiens -0.06852735719098746 KAEVNTIPGFDGVVK Unmodified 1572.8512 0.8511575 1263 A0A1B0GWA1;A0A1B0GUX9;A0A1B0GWI4;A0A1B0GU58;B2RDE0;P05165-3;P05165-2;P05165;A0A1B0GTR1 PCCA Propionyl-CoA carboxylase alpha chain, mitochondrial yes no 0 0 1 1 0 1 53.924 53.924 3 0.067391 15992 20230619_1880_Aki_TMTPro18x_K_F1 42.257 26.991 19269 14720 17955 20842 17753 25332 22562 22309 25288 22994 23093 23364 22369 20880 19959 25428 24160 22631 17800 13529 18374 20592 18634 25183 22551 23017 25513 23220 23766 23622 22757 21847 20600 25310 23065 21530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11446000 14226 1263 13453 27256 21885 21885 1 9606 Homo sapiens 0.08764597094818782 KAEYPFSSEQK Unmodified 1312.6299 0.62993134 2649 H0Y9V7;B4E295;B4E2Q0;P98194-2;P98194-4;P98194;P98194-3;P98194-5;P98194-8;P98194-9;P98194-6;P98194-7;H0Y8X9;Q59G44;H0Y9S7 ATP2C1 Calcium-transporting ATPase;Calcium-transporting ATPase type 2C member 1 yes no 0 0 1 7 0 1 44.339 44.422 3 6.2437E-07 11062 20230619_1887_Aki_TMTPro18x_K_F7 165.73 112.04 117100 107630 137000 129750 135390 125160 152480 126960 121770 161640 183030 131340 152030 119950 205410 115400 120850 97305 108520 98686 137430 129210 140860 127050 151840 130580 128330 160490 183340 134390 158460 123920 202760 115370 116280 92699 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81293000 14227 2649 13454 27257 21886 21886 1 9606 Homo sapiens -0.013878428816269661 KAFEEAEK Unmodified 950.47091 0.4709115 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1;A0A7P0TAY0 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 1 4 0 1 40.955 40.998 3 0.022341 9975 20230619_1883_Aki_TMTPro18x_K_F4 76.815 50.876 111220 70414 148300 137590 142490 79072 149590 150390 95191 175650 246410 229440 189980 123220 285420 93999 144090 111620 102980 65053 147310 132680 147750 86160 148960 149460 106220 177410 243330 226680 199660 129200 279670 96600 139000 105950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100610000 14228 3656 13455 27258 21887 21887 1 9606 Homo sapiens -0.006305117191004683 KAGGANYDAQTE Unmodified 1223.5418 0.54184461 1447 Q14019;A0A384MTY2;H3BT58 COTL1 Coactosin-like protein yes no 0 0 1 3 0 1 36.136 36.191 2 0.075184 8044 20230619_1882_Aki_TMTPro18x_K_F3 46.819 38.287 10913 7788.1 17465 15646 34717 42234 27558 34201 24969 20260 40940 42122 26915 27791 35781 8485.9 28377 24221 10133 7194.4 17457 15484 34504 40463 28139 35079 26166 21879 40662 41245 28343 28099 35665 9821.6 27194 22854 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30569000 14229 1447 13456 27259 21888 21888 1 9606 Homo sapiens -0.06098463472221738 KAGNFYVPAEPK Unmodified 1319.6874 0.68738664 3473 P18124;A0A024R814;A8MUD9;C9JIJ5;C9JZ88 RPL7 60S ribosomal protein L7 yes no 0 0 1 1.5 0.5 2 2 47.382 47.42 3;4 0.0010978 13236 20230619_1881_Aki_TMTPro18x_K_F2 90.614 8.6939 319220 277580 329020 326050 384160 339140 401910 362940 316150 342340 364730 282430 247020 236020 353500 254530 275060 211300 295370 254500 334160 325610 394130 342770 401570 368670 328940 345080 366490 288010 260950 245830 352710 253460 263490 201390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1226100000 14230 3473 13457 27260;27261;27262;27263 21889;21890 21890 2 9606 Homo sapiens 0.040330441145897566 KAHGLLAEENR Unmodified 1236.6575 0.65748349 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;H0YFY6;Q96HN5;K4DIE0;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 6.5 0.5 1 1 33.861 33.922 3 0.00285 6882 20230619_1887_Aki_TMTPro18x_K_F7 76.655 60.023 37557 44758 39374 33012 51998 41470 53387 39852 33596 32789 43167 24173 21804 14233 52657 11631 11112 9316.2 34841 40850 39987 34487 52855 41352 53115 40663 35701 33237 42844 24626 24307 14896 50485 11741 11021 8879.6 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23499000 14231 349;3906 13458 27264;27265 21891;21892 21892 2 9606 Homo sapiens 0.04862105169240749 KAIEDEGGNPDEIEITSEGNKK Unmodified 2372.1343 0.13432781 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z959;B7Z2H3;K7ES42 SAFB Scaffold attachment factor B1 yes no 0 0 2 5 0 1 46.689 46.765 4 0.00010487 12394 20230619_1885_Aki_TMTPro18x_K_F5 76.186 63.258 22906 19471 24662 25941 19679 25057 24477 27086 21632 28780 30775 24966 26086 21211 27030 19706 21625 17615 21199 17876 24843 25655 20973 25439 24342 27569 22582 28854 30906 25389 26794 21929 27130 19743 20715 16767 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73807000 14232 2020 13459 27266 21893 21893 1 9606 Homo sapiens 0.0031460238051295164 KALAAGGYDVEK Unmodified 1220.6401 0.6401021 3461 P16401 HIST1H1B Histone H1.5 yes yes 0 0 1 8 0 1 45.335 45.363 3 0.00056449 11629 20230619_1888_Aki_TMTPro18x_K_F8 97.69 81.436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14233 3461 13460 27267 21894 21894 1 9606 Homo sapiens 0.038607648436027375 KANAEELANNLK Unmodified 1313.6939 0.69392858 4199 Q86XP3;Q86XP3-2;B3KTL4;B3KX23;T2DQ69;B3KV84 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 0 1 7.5 0.5 1 1 47.77 47.844 3 0.00015044 12599 20230619_1888_Aki_TMTPro18x_K_F8 107.2 62.432 124020 108420 113640 126230 127480 147320 149520 142840 145750 163920 171810 143290 151230 115160 160010 136470 126490 117930 114650 99394 116610 126310 131940 147270 149360 146780 149790 163840 174000 145480 155240 120900 160570 135870 121290 112240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106670000 14234 4199 13461 27268;27269 21895 21895 1 9606 Homo sapiens 0.04962937275331569 KANLQIDQINTDLNLER Unmodified 1997.0542 0.054167421 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 1 7 0 1 54.729 54.793 3 2.7739E-11 15680 20230619_1887_Aki_TMTPro18x_K_F7 145.54 116.18 105050 98110 113320 114780 114900 129160 121490 136250 113020 143170 126290 93133 113610 72887 158480 74033 67551 49386 97290 89925 114460 114780 119340 129680 121940 138790 116320 142680 128280 96098 118180 76032 154870 73309 65385 47234 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274390000 14235 148 13462 27270 21896 21896 1 9606 Homo sapiens 0.09552250358683523 KANNSQEPSPQLASSVASTR Unmodified 2071.0294 0.029409233 758 A0A024RDE8;Q96HC4;B7Z481;Q4W5K9;B7Z8X5;Q96HC4-7;Q96HC4-4;H0Y8Y3;Q59FC9 PDLIM5;LIM PDZ and LIM domain protein 5 yes no 0 0 1 8 0 1 40.011 40 3 3.2648E-12 9482 20230619_1888_Aki_TMTPro18x_K_F8 143.93 134.52 45200 39536 50869 36500 39774 38480 49427 47769 43891 47901 46478 34908 44112 26317 42463 35709 30203 18232 41856 36173 50943 37217 42365 39020 49136 48148 45151 47974 47392 35757 44916 27960 42491 34791 28934 17546 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8613700 14236 758 13463 27271 21897;21898 21897 2 9606 Homo sapiens 0.03673570485307209 KAPDFVFYAPR Unmodified 1309.6819 0.68190733 3456;2184 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;J7M2B1;Q6PJT4;Q9UK20;Q9UJZ6;Q9UJZ8;Q9UJZ2;Q9UJU1;P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;Q05CU6;Q6PKD3;V9HWC0;P26038;A0A8V8TKR9 EZR;HEL-S-105;EZR-ROS1;MSN;VIL2;RDX;HEL70 Ezrin;Tyrosine-protein kinase receptor;Radixin;Moesin no no 0 0 1 3.5 0.5 1 1 53.002 53.042 3 0.0016285 15367 20230619_1883_Aki_TMTPro18x_K_F4 86.911 73.248 447190 370190 392220 475230 453400 503660 441720 464930 524860 420500 414550 383640 446070 337510 390320 487900 419340 391640 413120 339770 404400 471510 466070 506210 448650 476460 525450 426430 431660 389940 451400 357710 400030 482210 400750 373100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1619299999.9999998 14237 3456;2184 13464 27272;27273 21899 21899 1 9606 Homo sapiens 0.039453653227838004 KAPGCVLSNPDQK Unmodified 1412.7082 0.70819844 3413 P08651-5;Q6FI30;B7Z4T6;A0A286YEX4;P08651-4;P08651-3;P08651-6;P08651-2;P08651 NFIC Nuclear factor 1 C-type;Nuclear factor 1 yes no 0 0 1 4.5 3.5 1 1 42.33 42.331 3 6.1021E-06 10413 20230619_1888_Aki_TMTPro18x_K_F8 125.03 104.93 71305 55817 70467 76773 94809 106680 99386 95794 116410 90132 96525 96829 95630 78265 93787 107610 93182 89539 65909 51279 72077 76172 96705 105320 100420 98446 116760 91649 99945 97412 97527 82872 95447 106620 89136 85250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92978000 14238 3413 13465 27274;27275 21900;21901 21901 2 9606 Homo sapiens 0.018352664319536416 KAPIFTSEQGEK Unmodified 1333.6878 0.68778057 1094 A0A0S2Z4E4;B2R6S4;A0A0S2Z4Y3;P16333;C9JAB9;P16333-2 NCK1 Cytoplasmic protein NCK1 yes no 0 0 1 7 0 1 44.743 44.828 3 4.529E-05 11256 20230619_1887_Aki_TMTPro18x_K_F7 119.17 96.448 93641 78162 88236 92254 87453 104270 94199 97397 112080 113500 129400 134250 131760 112490 107480 147420 150100 137530 86557 71675 90101 92181 91179 104360 95185 100410 113860 114470 132050 134650 133290 118560 112290 146910 143120 130780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78203000 14239 1094 13466 27276 21902 21902 1 9606 Homo sapiens 0.03428419043802933 KAPPLVENEEAEPGR Unmodified 1634.8264 0.82639932 451 A8K2I7;A0A024R7I0;O14908;K7ELJ2 GIPC1 PDZ domain-containing protein GIPC1 yes no 0 0 1 2.5 0.5 1 1 41.516 41.578 3 4.6743E-06 10531 20230619_1881_Aki_TMTPro18x_K_F2 115.09 98.366 33914 21815 31651 38495 37138 45016 37998 40344 52066 41887 53560 57658 53493 44074 41068 46712 57480 56949 31301 20122 32470 37551 38226 44879 38699 41582 52256 42748 54883 57342 54010 46061 42914 47458 54834 53984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60086000 14240 451 13467 27277;27278 21903;21904 21903 2 9606 Homo sapiens 0.034379172214585196 KAPPSQPPR Unmodified 976.54541 0.54541385 120 A0A024R104;Q12860-2;Q12860 CNTN1 Contactin-1 yes no 0 0 1 2.5 0.5 1 1 31.368 31.442 3 0.045714 6148 20230619_1882_Aki_TMTPro18x_K_F3 52.49 41.616 56278 30865 71006 57769 38965 38958 36608 42819 45756 51760 98969 108650 67204 68487 91757 37447 104470 97072 52044 28517 70307 55883 42895 40894 37483 43778 48121 53508 97742 106240 70822 70322 93263 41650 99781 91595 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20286000 14241 120 13468 27279;27280 21905 21905 1 9606 Homo sapiens 0.05620295882943083 KAQDEGLLSDVVPFK Unmodified 1644.8723 0.87228688 3658 P55084-2;P55084;B4DY96;F5GZQ3;B4DDC9;D6W539 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 1 7.5 0.5 1 1 60.316 60.358 3 1.4214E-07 17945 20230619_1888_Aki_TMTPro18x_K_F8 126.88 107.55 270870 220780 258240 300000 280050 352030 345010 364620 429800 382760 361140 420550 454060 372090 355370 466110 445980 443050 250360 202770 264070 297060 291370 352110 346640 372000 430340 387080 378160 423500 455810 390390 368710 465280 425810 421060 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 137090000 14242 3658 13469 27281;27282 21906;21907;21908 21907 3 9606 Homo sapiens 0.07564562403672426 KAQEGGGSEVFQELK Unmodified 1605.7999 0.79985021 3120 I6L9E8;Q8NCA5;A0A8I5KR56;A0A8I5QKV5;A0A8I5KZA5;E9PH82;B3KTW4;Q05CT2 FAM98A Protein FAM98A yes no 0 0 1 6 0 1 48.82 48.898 3 1.4735E-07 13463 20230619_1886_Aki_TMTPro18x_K_F6 126.19 86.076 88229 80205 94984 111940 102000 109220 111320 107820 106900 118330 118620 104440 111810 101110 93112 118790 104940 98901 81691 73655 96137 110360 105560 110610 111580 110550 109690 118580 120750 106590 113480 105300 95809 117920 100250 94170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71687000 14243 3120 13470 27283 21909 21909 1 9606 Homo sapiens 0.02118228330164129 KAQSLAEQTSDTAGLESSTR Unmodified 2079.008 0.008005089 3828 Q12986-2;Q12986;A0JLR2;Q12986-3 NFX1 Transcriptional repressor NF-X1 yes no 0 0 1 5 0 1 43.754 43.834 3 1.3421E-07 11162 20230619_1885_Aki_TMTPro18x_K_F5 98.132 88.849 10910 9275.3 7751.2 11630 9601.8 14882 10671 11220 10186 11482 14040 8967.3 10011 9310 14551 9654.9 10200 8704.4 10066 8510 8193.9 11584 9895.3 14705 10686 11719 10556 11515 14022 9245.8 10558 9608.3 14449 9661.7 9791 8283 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9935300 14244 3828 13471 27284 21910 21910 1 9606 Homo sapiens 0.011661406659186468 KASAEGPLLGPEAAPSGEGAGSK Unmodified 2080.0437 0.043662314 4416 Q9BRJ6;C9JQV0 C7orf50 Uncharacterized protein C7orf50 yes no 0 0 1 6 0 1 46.687 46.771 3 1.857E-08 12480 20230619_1886_Aki_TMTPro18x_K_F6 107.75 89.383 8104.9 6414.4 7618.5 8756.9 6197.8 7306.2 7997.1 6902.2 10741 11897 11064 11063 12795 9671.6 8323.2 9949.6 9040.3 8565.1 7489.1 5892.1 7765.5 8629.2 6607.7 7488.5 8043 7218.9 10808 11731 11405 11212 12780 10041 8590.5 9914.8 8639.5 8151.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10854000 14245 4416 13472 27285 21911 21911 1 9606 Homo sapiens 0.04684222913601843 KASDVHEVR Unmodified 1039.5411 0.54105675 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;Q504U3;A0A024R609;H3BQ34;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 1 4 0 1 23.164 23.23 4 0.0012169 3845 20230619_1883_Aki_TMTPro18x_K_F4 89.171 60.444 43068 30566 74547 72425 131360 113400 109660 124300 63027 49028 87354 88248 47210 54941 110760 27821 79568 76079 40031 28319 73937 70181 130890 111770 110430 124140 67728 54689 86881 86663 52531 56312 109330 31369 76407 71762 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28634000 14246 370;3451 13473 27286 21912 21912 1 9606 Homo sapiens 0.022867866693559336 KASGPPVSELITK Unmodified 1325.7555 0.7554662 1927;3462;3463 Q4VB24;A3R0T8;P10412;A3R0T7;B2R984;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 no no 0 0 1 2 0 1 49.416 49.475 3 2.1391E-06 14188 20230619_1881_Aki_TMTPro18x_K_F2 138.68 82.589 166650 116770 121510 330230 213270 273640 246060 366720 208510 150270 210960 216320 150720 125500 410630 135030 130390 142360 153610 108590 129950 314500 215400 282500 245180 362240 214290 165200 214290 213620 167750 132900 396010 136870 127550 135090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 315090000 14247 1927;3462;3463 13474 27287 21913 21913 1 9606 Homo sapiens 0.10561868974605204 KASVVTLPVYLNFTR Unmodified 1706.9719 0.97194134 3881 Q14204;A0A2R8Y706 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 8 0 1 61.169 61.201 3 0.029424 18292 20230619_1888_Aki_TMTPro18x_K_F8 51.147 36.271 113650 102240 111130 132690 105910 103910 117800 107510 104440 133680 137040 89073 82306 106470 124050 124000 112800 93286 105140 93818 113130 131100 110590 107400 117720 110360 108520 132310 136430 93205 87948 110010 124790 122640 107900 89001 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66143000 14248 3881 13475 27288 21914 21914 1 9606 Homo sapiens 0.14673424808324853 KATGAATPK Unmodified 843.48142 0.48141661 1927 Q4VB24;A3R0T8;P10412;A3R0T7 HIST1H1E Histone H1.4 yes no 0 0 1 2 0 1 33.656 33.712 3 0.0048878 7154 20230619_1881_Aki_TMTPro18x_K_F2 78.342 46.97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14249 1927 13476 27289 21915 21915 1 9606 Homo sapiens 0.05341515726001944 KATGPPVSELITK Unmodified 1339.7711 0.77111627 3461 P16401 HIST1H1B Histone H1.5 yes yes 0 0 1 2 0 1 49.948 50.007 3 2.7538E-06 14476 20230619_1881_Aki_TMTPro18x_K_F2 136.57 109.47 128720 135590 180410 259810 249150 267410 247830 259370 166360 125450 187250 160060 97666 92488 447780 96322 121760 125500 119630 124990 180520 251910 252860 269410 247490 262030 174660 134910 187790 158760 118880 97801 429240 99503 119680 118870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201060000 14250 3461 13477 27290 21916 21916 1 9606 Homo sapiens 0.11482155491648882 KATSCFPR Unmodified 965.47529 0.47528537 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 4 0 1 35.751 35.799 3 0.032022 7858 20230619_1883_Aki_TMTPro18x_K_F4 57.859 43.168 179960 127430 159620 176200 219060 252950 223090 217550 247680 77376 72600 62989 70589 55146 106720 72911 90244 50604 166110 117130 164880 174860 223090 249010 225260 220920 243430 85601 82686 64495 73878 58081 106770 71859 86230 48445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76360000 14251 349;3906 13478 27291 21917 21917 1 9606 Homo sapiens -0.0088332577716983 KATVFLNPAACK Unmodified 1318.7067 0.70674187 1938 A4D1U5;Q53H12;E9PG39;B4DR72;A0A3B3ISZ0;E9PC15;B4E2Z8;A0A3B3IS09;A0A3B3ITX7;A0A3B3ITD0 FLJ10842;AGK Acylglycerol kinase, mitochondrial yes no 0 0 1 5 0 1 50.022 50.098 3 0.0042037 13791 20230619_1885_Aki_TMTPro18x_K_F5 72.265 56.375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14252 1938 13479 27292 21918 21918 1 9606 Homo sapiens 0.06013677133864803 KAVVVCPK Unmodified 899.52626 0.52625831 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 1 4 0 1 41.163 41.205 3 0.019668 10061 20230619_1883_Aki_TMTPro18x_K_F4 60.91 40.009 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14253 3776 13480 27293 21919 21919 1 9606 Homo sapiens 0.07247623267687686 KCCIPETR Unmodified 1062.495 0.49503454 2141 A8K9T8;Q9BYT8;B3KU23;E9PCB6;Q9BQD0 NLN Neurolysin, mitochondrial yes no 0 0 1 7.5 0.5 1 1 34.927 34.961 3 0.011805 7471 20230619_1888_Aki_TMTPro18x_K_F8 74.684 61.484 21361 14651 37484 30418 53089 34922 44493 37910 22099 34828 51204 25688 23022 18856 57176 13790 20560 17933 19855 13544 36904 29476 53381 35077 44690 38446 24955 35036 49828 26317 25943 19429 55280 14317 20008 16998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9746500 14254 2141 13481 27294;27295 21920 21920 1 9606 Homo sapiens -0.03371317828714382 KCEHDPHVLLAVAK Unmodified 1615.8504 0.850446 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 1 8 0 1 42.412 42.415 5 0.00020557 10491 20230619_1888_Aki_TMTPro18x_K_F8 93.823 75.727 41461 29335 40461 43627 46662 43241 45832 49711 51923 41282 38281 38320 49959 40021 41461 46467 50439 49056 38298 26986 41286 42873 47895 43907 46454 50101 52008 42097 40431 39115 50214 41591 42830 46721 48163 46572 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120990000 14255 3337 13482 27296 21921 21921 1 9606 Homo sapiens 0.06715479174135908 KCEPIIMTVPR Unmodified 1342.7101 0.71011269 676 Q9ULV4-3;Q9ULV4-2;Q9ULV4;Q59EA2;A0A024RBI5;B3KN06;Q53G58;B4E3S0;B7Z9V0;H0YHL7;B3KRY9;B3KSZ9;J3QLV6;Q6QEF8-3;J3KSS5;Q6QEF8-2;Q6QEF8-4;Q6QEF8-5;Q6QEF8 CORO1C;CORO6 Coronin-1C;Coronin;Coronin-6 yes no 0 0 1 2 0 1 47.464 47.54 3 0.0025601 13312 20230619_1881_Aki_TMTPro18x_K_F2 79.089 61.763 306920 409020 433150 341850 412590 372790 439320 385580 315860 353890 347800 221300 296530 206220 608110 172170 195240 210190 285880 373510 428560 351830 429490 375550 437760 392230 330290 355140 353010 230280 318220 211860 587680 177140 190890 199190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180710000 14256 676 13483 27297 21922 21922 1 9606 Homo sapiens 0.0524660391620273 KCIIVEEGK Unmodified 1074.5743 0.57433072 3684 V9HWA6;P60981;P60981-2;F6RFD5;B7Z9M9 HEL32;DSTN Destrin yes no 0 0 1 7 0 1 44.478 44.561 3 0.027139 11127 20230619_1887_Aki_TMTPro18x_K_F7 61.833 36.447 121910 122230 151900 120780 170750 148310 170420 144660 142550 141100 165940 106470 109590 90771 158880 91151 100960 100180 113110 111840 151870 122610 175340 147980 170990 147960 147680 141710 166400 109250 115860 94240 157130 92333 97151 95063 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47794000 14257 3684 13484 27298 21923 21923 1 9606 Homo sapiens 0.040026523970709604 KCPFTGNVSIR Unmodified 1277.655 0.65504065 3713 P62280;M0QZC5 RPS11 40S ribosomal protein S11 yes no 0 0 1 4.5 0.5 1 1 43.587 43.65 3 0.00022439 11012 20230619_1885_Aki_TMTPro18x_K_F5 111.79 94.767 918560 673350 754970 844890 731140 796610 854450 892940 863260 958960 677820 595020 1060800 763140 505240 1136600 1012800 852510 847560 618160 780680 838630 764820 811460 854800 907080 873070 954430 719770 627190 1043800 802030 554950 1118200 963020 813310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3038999999.9999995 14258 3713 13485 27299;27300 21924;21925 21925 2 9606 Homo sapiens 0.027319334399408035 KCSESIPK Unmodified 947.47462 0.47461667 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9;Q05D33;Q6PJL0;A0A7I2V384 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 1 7.5 0.5 1 1 37.882 37.907 3 0.038269 8625 20230619_1888_Aki_TMTPro18x_K_F8 61.56 20.531 82447 42455 100030 113720 172590 192460 127970 155870 106210 94161 157940 136160 88589 72181 152330 30503 78919 45320 76195 39496 101330 109820 172220 187600 131060 159990 111370 99677 156540 134100 95476 74347 149040 32602 75987 43012 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74223000 14259 261 13486 27301;27302 21926 21926 1 9606 Homo sapiens -0.001221652168737819 KDACELIER Unmodified 1132.5547 0.55465791 3034 H0Y9X1;Q96EY4;D6RA57;D6RE67;D6RC31;B7Z504 TMA16 Translation machinery-associated protein 16 yes no 0 0 1 4 0 1 41.713 41.756 3 0.0027503 10286 20230619_1883_Aki_TMTPro18x_K_F4 78.548 55.998 155790 115440 142150 126760 146170 160080 161430 157550 171550 187350 172930 154630 191840 147580 148110 191550 190340 154220 143860 105840 145510 127620 151930 159330 162210 161860 174390 186730 178030 158290 193050 154840 153930 189580 181450 147010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86023000 14260 3034 13487 27303 21927 21927 1 9606 Homo sapiens -0.0063172361371925945 KDAFADAVQR Unmodified 1119.5673 0.5672715 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 0 1 7 0 1 42.53 42.605 3 0.02036 10323 20230619_1887_Aki_TMTPro18x_K_F7 51.567 40.957 67543 78950 103220 65831 120410 83597 117860 88817 73455 69746 83973 45252 56811 37608 173350 41578 45853 45578 62895 72117 101870 67968 123010 83515 117600 89907 77748 70737 84479 46905 64159 39343 166460 42367 45103 43249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47550000 14261 3197 13488 27304 21928 21928 1 9606 Homo sapiens 0.012270558408545185 KDCEAYALQMTK Oxidation (M) 1472.664 0.66395036 3579 P42285;A8K6I4 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 1 1 7 0 1 43.769 43.851 3 0.055948 10838 20230619_1887_Aki_TMTPro18x_K_F7 45.879 32.679 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14262 3579 13489 27305 21929 21929 2249 1 9606 Homo sapiens -0.05347505776580874 KDCEVVMMIGLPGAGK Unmodified 1703.8409 0.84086887 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 1 2.5 0.5 1 1 59.759 59.779 4 8.7173E-06 18621 20230619_1881_Aki_TMTPro18x_K_F2 109.79 97.429 132100 107620 122550 116630 106770 116850 142070 129070 122810 140870 128350 130870 142570 121550 170460 154420 139390 142780 122080 98623 125020 117140 113030 118480 140610 131360 126540 141380 132190 133010 146350 127420 171040 154060 133690 135730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84782000 14263 3776 13490 27306;27307 21930 21930 1 9606 Homo sapiens 0.017102067820815137 KDDEENYLDLFSHK Unmodified 1751.8002 0.80024414 3807 Q07666;B4DDX2;B2R7B5;Q07666-2;B4E043;Q07666-3 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 0 0 1 5 0 1 55.305 55.369 3 0.00023956 15970 20230619_1885_Aki_TMTPro18x_K_F5 94.461 68.595 29209 20538 26627 30131 24892 32267 28533 29535 35362 36286 34196 37965 37827 34185 33938 42673 41279 47419 26965 18890 27263 29653 26145 32382 28777 30543 35610 36364 35323 38330 38330 35837 35035 42981 39467 44966 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13338000 14264 3807 13491 27308 21931 21931 1 9606 Homo sapiens -0.04558396740685566 KDDESNLVEEK Unmodified 1304.6096 0.60958983 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5;G3V2P7 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 1 2 0.816 1 1 1 42.651 42.699 3 0.00021588 10772 20230619_1882_Aki_TMTPro18x_K_F3 112.42 78.581 173800 116130 157720 200520 158020 174890 188870 184630 238660 208710 232730 227020 244140 194500 172360 189110 273960 249020 160400 107060 161830 195060 165060 178910 190160 188680 239950 210250 239400 228460 245400 201580 182210 193440 260960 235980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 282830000 14265 3808 13492 27309;27310;27311 21932;21933 21933 2 9606 Homo sapiens -0.030530583321024096 KDDEVQVVR Unmodified 1086.5669 0.56693715 3695 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;A0A024RBF6 RPL26;RPL26L1;hCG_26523 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 1 3.4 1.02 1 2 1 1 37.025 37.086 2;3 0.00051898 8426 20230619_1882_Aki_TMTPro18x_K_F3 130.66 108.01 510650 333400 478060 509530 585890 627780 590060 585570 721570 587800 657480 606620 665700 531650 549220 483920 660440 538660 471340 306910 490160 501400 600240 624660 598660 601120 724690 594800 677450 612320 673440 548620 566220 490490 629990 511490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2181900000 14266 3695 13493 27312;27313;27314;27315;27316 21934;21935;21936 21935 3 9606 Homo sapiens 0.027116361209891693 KDDGISFSNQTGPAWAGSER Unmodified 2121.9716 0.97156 2657 Q6IBR8;B5BU01;P20042;Q96I16 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 1 6 0 1 49.741 49.818 3 3.9166000000000004E-30 13817 20230619_1886_Aki_TMTPro18x_K_F6 213.13 202.02 37857 28543 35049 37718 27319 47899 33979 31460 55340 52719 48379 81813 85283 78818 45958 117330 96310 163160 34967 26214 35757 37447 29359 47239 34531 33871 54933 53074 51757 81632 84117 83475 50623 119580 92125 154240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19885000 14267 2657 13494 27317 21937;21938 21937 2 9606 Homo sapiens -0.04454691440150782 KDDPTLLSSGR Unmodified 1187.6146 0.61461563 1398 B7Z972;A0A384MDK7;A0A3F2YNX8;P22061;P22061-2;F6S8N6 PCMT1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 1 6 0.816 1 1 1 40.892 40.975 3 0.002002 9668 20230619_1887_Aki_TMTPro18x_K_F7 68.034 43.242 370920 314950 393530 421630 431380 456430 450350 438110 493840 478470 565020 529370 520140 439510 548490 514680 552700 462950 343230 289160 398620 417420 445360 458490 454410 450000 503340 482940 574260 532210 533550 460170 557250 513320 528160 440590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1322800000 14268 1398 13495 27318;27319;27320 21939;21940;21941 21941 3 9606 Homo sapiens 0.02831290321182678 KDDVQAAEAEANKK Unmodified 1515.7529 0.75290002 3467 Q5U058;P17677;P17677-2 GAP43 Neuromodulin yes no 0 0 2 4.5 0.5 1 1 42.977 43.039 4 0.0051289 10902 20230619_1883_Aki_TMTPro18x_K_F4 71.531 58.971 114780 81382 101320 135490 85324 94522 88450 103060 132200 99000 132240 179110 143440 139770 110800 157540 194250 231040 105940 74971 103980 131730 90106 98825 90441 104700 132050 102740 136430 176780 144710 146380 118120 161970 185300 218520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 224610000 14269 3467 13496 27321;27322 21942;21943 21942 2 9606 Homo sapiens 0.015653687789836113 KDDYEYCMSEYLR Unmodified 1770.7229 0.7229218 3645 Q5T4U8;Q59GT6;Q6IB63;P53611 RABGGTB Geranylgeranyl transferase type-2 subunit beta yes no 0 0 1 4.5 0.5 1 1 53.352 53.397 3 7.8792E-11 15223 20230619_1885_Aki_TMTPro18x_K_F5 175.66 173.29 79470 71656 86458 85463 75721 97807 86289 85691 87922 126600 107570 105890 127350 98232 101390 139700 119430 136970 73584 65698 87093 85349 79865 97671 86499 89453 90483 125070 110280 108190 128050 103850 104770 139440 114210 130060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112820000 14270 3645 13497 27323;27324 21944 21944 1 9606 Homo sapiens -0.13161074272898077 KDEDLFREWLK Unmodified 1477.7565 0.75652884 340 A0A024R5H0;O75531;B2R4V4 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed yes no 0 0 2 7.5 0.5 1 1 58.005 58.055 4 0.00018496 17005 20230619_1887_Aki_TMTPro18x_K_F7 105.03 83.495 352720 543220 420260 302580 381870 200530 367140 385280 220830 320140 314820 185220 243030 177040 388940 317370 264800 165990 328460 494770 419670 325450 396930 216290 367030 378990 237480 322380 314970 194540 256870 190330 385670 308460 253870 159620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 359470000 14271 340 13498 27325;27326 21945 21945 1 9606 Homo sapiens 0.03676083343498249 KDEELDPMDPSSYSDAPR Oxidation (M) 2066.8739 0.87387937 1105 A0A0S2Z4V5;A0A0S2Z556;O60828-5;O60828-2;O60828;O60828-4 PQBP1 Polyglutamine-binding protein 1 yes no 0 1 1 3 0 1 44.609 44.681 3 0.078306 11698 20230619_1882_Aki_TMTPro18x_K_F3 67.644 60.311 25599 20548 20416 24512 27494 27380 24174 28715 28418 32297 30656 32162 34841 28232 30756 35678 33663 33397 23628 18847 21296 24467 27905 27510 24711 29320 28836 32431 31540 32522 35223 29650 31534 35593 32179 31746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13788000 14272 1105 13499 27327 21946 21946 681 1 9606 Homo sapiens -0.11688261151130064 KDEELTSSQR Unmodified 1191.5731 0.57314474 2171 B0AZU0;Q6ZWT7;C9J2H7;B7Z3I3 MBOAT2 Lysophospholipid acyltransferase 2 yes no 0 0 1 3 0 1 33.932 33.998 3 0.052246 7168 20230619_1882_Aki_TMTPro18x_K_F3 47.556 29.692 33425 14735 36989 36129 53587 44461 37913 49796 43886 33152 61309 70827 46340 43779 57271 26357 60929 60570 30845 13696 37497 34810 53809 44438 39374 50035 44990 35518 61508 69210 48308 45129 58071 28787 58258 57169 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18204000 14273 2171 13500 27328 21947 21947 1 9606 Homo sapiens -0.014978904381450775 KDEEQAALGQK Unmodified 1215.6095 0.60953025 3956 Q1ED39;H3BPL4 KNOP1 Lysine-rich nucleolar protein 1 yes no 0 0 1 4 0 1 40.522 40.565 3 0.024312 9788 20230619_1883_Aki_TMTPro18x_K_F4 60.161 41.416 54900 34010 73654 88459 103080 113290 84237 106500 93490 73872 109520 134280 99197 98267 95680 59768 134520 128960 50831 31588 73792 85047 104180 112390 86389 108360 95264 78233 111330 132210 101520 100510 99285 64683 128300 121780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30119000 14274 3956 13501 27329 21948 21948 1 9606 Homo sapiens 0.010349864585577961 KDEEVLK Unmodified 859.4651 0.46509784 724;3204 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;F6TRA5;Q59G92;A0A0A0MT12;B4DIJ6;F6S4E6;B4DIZ8;A0A140T973;A0A140T9K1;A0A140T9L4;F6R6M7;F6QYI9;A0A0G2JJL7;A0A140T9K2;A0A140T9N3;O00148;B4DX78;O00148-2;K7EQN7;A0A024R7H0;O00148-3;A0A0D9SEM9 DDX39B;hCG_2005638;DDX39A;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A no no 0 0 1 3.5 0.5 1 1 40.916 40.967 3 0.022101 9977 20230619_1883_Aki_TMTPro18x_K_F4 78.334 25.168 334060 181370 438540 473870 643340 719840 528560 599530 541250 393640 639600 673790 421690 466280 645790 246560 558350 539190 309050 168590 440120 456990 648670 705720 540260 615070 553710 417470 642700 663730 448470 475920 645660 269100 534940 509100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 511410000 14275 724;3204 13502 27330;27331 21949 21949 1 9606 Homo sapiens 0.02974389769235586 KDEEVLKK Unmodified 987.56006 0.56006086 724;3204 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;F6TRA5;Q59G92;A0A0A0MT12;B4DIJ6;F6S4E6;B4DIZ8;A0A140T973;A0A140T9K1;A0A140T9L4;F6R6M7;F6QYI9;A0A0G2JJL7;A0A140T9K2;A0A140T9N3;O00148;B4DX78;O00148-2;K7EQN7;A0A024R7H0;O00148-3;A0A0D9SEM9 DDX39B;hCG_2005638;DDX39A;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A no no 0 0 2 7 0 1 40.537 40.605 3 0.029548 9475 20230619_1887_Aki_TMTPro18x_K_F7 78.934 47 17665 10981 24726 25129 36417 31512 26353 31634 21630 17135 30070 33131 21986 20797 31680 14306 22092 22519 16364 10173 24696 24274 36527 31374 27039 31912 22614 18565 30144 32474 23151 21502 31418 15004 21233 21300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22414000 14276 724;3204 13503 27332 21950 21950 1 9606 Homo sapiens 0.06578323240421469 KDEGEGAAGAGDHQDPSLGAGEAASK Unmodified 2424.0789 0.078938201 4031 Q5CZB5 DKFZp686M0430 yes yes 0 0 1 2.5 0.5 1 1 39.075 39.135 4 2.0778E-21 9391 20230619_1881_Aki_TMTPro18x_K_F2 168.96 156.52 106580 103100 119310 99239 110880 112660 118450 106550 111520 131740 158430 165010 143660 124940 177790 145320 162680 164560 98757 94332 119870 100840 115890 112870 118850 109990 115910 132730 159830 164610 148680 131270 179170 146890 155810 156090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138150000 14277 4031 13504 27333;27334 21951;21952 21951 2 9606 Homo sapiens -0.07613811087230715 KDEILGIANNR Unmodified 1241.6728 0.67279921 1824 F5H3I6;A0A8V8TNT4;A0A8V8TMD7;A0A8V8TME2;A0A8V8TP41;Q86UX7-2;Q86UX7 FERMT3 Fermitin family homolog 3 yes no 0 0 1 8 0 1 47.368 47.426 3 0.0011502 12454 20230619_1888_Aki_TMTPro18x_K_F8 90.926 55.046 32438 31909 34657 43951 61413 72420 74212 71412 99594 62700 86579 108640 72843 76176 90728 67975 76274 91645 30049 29291 35520 43743 62075 71005 74779 72780 99315 65285 89021 107000 75711 79139 91026 69855 73225 86738 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22654000 14278 1824 13505 27335 21953 21953 1 9606 Homo sapiens 0.061629719664551885 KDEKTDTLEDLFPTTK Unmodified 1879.9415 0.94148865 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 2 6 0 1 55.59 55.666 4 1.3782E-05 16280 20230619_1886_Aki_TMTPro18x_K_F6 107.03 86.977 64315 84298 89137 74205 101800 54907 106100 78545 33733 64469 74622 25600 28241 18949 125560 23869 23049 17265 59884 77010 88528 75664 104120 57771 104510 78314 40176 64594 72501 27654 34744 20080 119750 23869 23004 16490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41573000 14279 3444 13506 27336 21954 21954 1 9606 Homo sapiens 0.03671556841891288 KDELSDWSLAGEDDRDSR Unmodified 2092.9298 0.92975477 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;P51114-3;B4DM21;B4DM78;B4DGH9;E7EU85;H7C4S4 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 2 2.5 0.5 1 1 48.889 48.961 4 5.0485E-07 13983 20230619_1881_Aki_TMTPro18x_K_F2 118.37 109.55 232000 183930 248180 288800 146610 181910 238990 204970 218920 293580 271500 234340 285560 228930 271270 296730 306940 273370 214600 169230 249510 281500 162800 192480 235110 210460 226540 290000 276500 240500 290230 240020 278190 295720 293100 260010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 535380000 14280 1029 13507 27337;27338 21955 21955 1 9606 Homo sapiens -0.07299291919343887 KDENKVDGMNAPK Oxidation (M) 1460.6929 0.6929423 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 1 2 6 0 1 36.347 36.408 4 0.0021916 8099 20230619_1886_Aki_TMTPro18x_K_F6 75.669 50.347 44226 37814 57685 51809 69134 58040 62623 59730 55532 62937 74304 41889 45311 28593 75443 18011 25920 13238 41009 34726 57594 51265 70515 58297 63330 60977 57729 62755 73918 43049 48441 29432 73132 18210 25191 12670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32880000 14281 2578 13508 27339 21956 21956 1562 1 9606 Homo sapiens -0.018976451558728513 KDEQEHEFYK Unmodified 1351.6044 0.60444487 2016 A8K2M0;P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 1 4 0.816 1 1 1 38.766 38.829 4 0.0027894 9058 20230619_1883_Aki_TMTPro18x_K_F4 85.288 69.533 651870 515950 546520 714490 744370 806730 795490 831720 1024400 862080 934380 936140 982890 777810 797050 1008000 1055400 975290 601830 474010 568030 706090 759370 809160 805870 848590 1026600 872100 964780 941920 992680 819900 829150 1006800 1006800 926980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 629690000 14282 2016 13509 27340;27341;27342 21957;21958;21959 21957 3 9606 Homo sapiens -0.05729317404052381 KDEVCVNPYHYQR Unmodified 1706.7835 0.78348864 366 A0A024R5Z3;P84022;H0YMP2;H0YL71;H3BP09;H3BVD1;Q59F45;P84022-3;P84022-2 SMAD3 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 3 no no 0 0 1 7 0 1 39.725 39.79 4 5.5548E-08 9151 20230619_1887_Aki_TMTPro18x_K_F7 132.97 126.84 54766 39501 49436 48563 51836 56592 63186 60275 58137 65807 69552 62793 71039 62653 63356 82444 77367 80591 50562 36258 50701 48422 53936 56702 62899 61461 59998 66101 70848 63945 72116 65674 65441 82365 73911 76553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112410000 14283 366 13510 27343 21960 21960 1 9606 Homo sapiens -0.041631761076132534 KDIESIR Unmodified 859.47633 0.47633123 2038 A8K4A8;Q6PI48;Q9H9J7;Q9NVT8;A0A3B3IS01;A0A3B3IT01;A0A3B3ITK9;A0A3B3ITS3;A0A3B3IS54 DARS2 Aspartate--tRNA ligase, mitochondrial yes no 0 0 1 4 0 1 35.529 35.576 3 0.086802 7757 20230619_1883_Aki_TMTPro18x_K_F4 42.109 1.227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14284 2038 13511 27344 21961 21961 1 9606 Homo sapiens 0.040972118633817445 KDLCNTHLMR Unmodified 1286.6224 0.62236032 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 2 0 1 37.515 37.575 4 0.0017769 8734 20230619_1881_Aki_TMTPro18x_K_F2 91.313 79.168 46008 33898 48267 45651 46677 58819 53148 48398 60863 50069 56458 52935 43880 37115 55918 40590 45684 40592 42534 31142 48815 45303 48840 58211 53448 50219 61337 50620 57582 53057 45740 38988 55999 40793 43773 38573 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35680000 14285 3758 13512 27345 21962 21962 1 9606 Homo sapiens -0.009485969545721673 KDLYANTVLSGGTTMYPGIADR Oxidation (M) 2358.1526 0.15256084 3112;3679;4827 P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;Q96FU6;Q96DE1;A5GZ75;A4UCT3;F1BXA6;Q9UE89;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;V9HVZ7 ACTG1;ACTB;PS1TP5BP1;HEL-176 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 1 1 2 0 1 54.961 54.983 3 6.6588E-11 16572 20230619_1881_Aki_TMTPro18x_K_F2 128.01 122.03 129120 153860 179860 201760 234280 222010 273810 193280 111460 162340 168590 81946 106210 65216 289250 42951 42335 37191 120120 141090 179480 200010 239190 222380 268620 198850 125190 163110 167450 86374 118560 66841 275920 44028 42857 35404 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77471000 14286 3112;3679;4827 13513 27346 21963;21964 21964 1806 2 9606 Homo sapiens 0.02781065821500306 KDPATQQAFVFGQNLR Unmodified 1818.9377 0.9376811 2698 Q9H6Z4;Q9H6Z4-2;Q9H6Z4-3;Q53GE1;B7Z7F3;Q308M8;B7Z5P4;A0A384ME25;K7EN31 RANBP3 Ran-binding protein 3 yes no 0 0 1 3 0 1 51.898 51.964 3 5.4857E-15 15039 20230619_1882_Aki_TMTPro18x_K_F3 189.37 159.83 222280 164820 194250 215120 192380 203530 198850 195020 230860 262700 253400 223450 295400 205140 253360 309980 266510 286580 205200 151360 199720 212930 200200 206530 201190 201670 234520 260640 260540 228210 297830 217990 259420 308310 255010 272370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 366410000 14287 2698 13514 27347 21965 21965 1 9606 Homo sapiens 0.060969766494054056 KDPELWGSVLLESNPYR Unmodified 2002.016 0.015991 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 1 4.5 3.5 1 1 61.97 61.984 3 9.8829E-14 18612 20230619_1888_Aki_TMTPro18x_K_F8 162.15 128.36 342830 300770 343990 398000 308870 368720 376020 382370 377670 426080 401970 405840 472510 344490 448140 397490 384740 363560 317150 276080 349180 393490 325530 375290 375440 390930 385980 427470 414490 410700 478310 360420 452330 396930 368590 345750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 413060000 14288 826 13515 27348;27349 21966;21967 21967 2 9606 Homo sapiens 0.05506364444022438 KDPEQEVEK Unmodified 1100.535 0.53496832 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1;Q7Z4Y3 SRRT Serrate RNA effector molecule homolog yes no 0 0 1 2.5 0.5 1 1 39.232 39.293 3 0.022625 9501 20230619_1881_Aki_TMTPro18x_K_F2 64.103 35.185 62602 44986 84505 75383 89624 106890 82273 91574 92506 75803 103150 107290 83710 78737 89658 63494 87527 74624 58010 41444 84049 74010 92503 105270 83767 94156 93990 78424 104520 106460 86364 81303 90796 64789 83677 70808 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106030000 14289 4464 13516 27350;27351 21968 21968 1 9606 Homo sapiens -0.011277763528141804 KDQYFLDK Unmodified 1055.5288 0.52876073 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 1 7.5 0.5 1 1 48.246 48.323 3 0.0055098 12817 20230619_1888_Aki_TMTPro18x_K_F8 91.855 50.868 154010 129800 169390 157640 158300 191440 188540 152810 172790 168990 194670 171060 169340 139030 183700 154980 167940 161540 142550 119050 170590 157370 166120 190110 187850 159330 177730 170010 197490 172510 174240 145350 185520 155970 160790 153380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195620000 14290 4191 13517 27352;27353 21969 21969 1 9606 Homo sapiens 0.00321750206330762 KDSETGENIR Unmodified 1147.5469 0.54692999 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 1 2.5 0.5 1 1 32.141 32.21 3 0.019659 6472 20230619_1882_Aki_TMTPro18x_K_F3 64.121 43.281 32759 31441 98589 52881 169500 72245 111270 78037 43697 39387 64522 26930 21470 20926 258050 16504 26314 25564 30828 28935 95329 51972 167600 71997 113470 78352 49199 41457 63596 27836 34290 21568 244110 17938 27412 24188 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 50556000 14291 1488 13518 27354;27355 21970;21971 21971 2 9606 Homo sapiens -0.020941596096236026 KDVDDATLSR Unmodified 1118.5568 0.5567664 2433 B3KWQ6;P41219;P41219-2;F8W835 PRPH Peripherin yes no 0 0 1 2.5 0.5 1 1 37.65 37.707 3 0.0024429 8671 20230619_1882_Aki_TMTPro18x_K_F3 84.605 70.487 204670 123870 238270 238200 201650 176700 221590 216310 197050 234120 312240 251770 278550 213270 332030 138730 221930 199490 189200 114430 238620 230250 212320 184220 221750 218860 206710 236020 313210 253440 287480 217530 329520 144710 213250 188910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 518050000 14292 2433 13519 27356;27357 21972 21972 1 9606 Homo sapiens 0.0022302839574877 KDVGRPQPGR Unmodified 1108.6101 0.61013937 1438 A0A384MTL2;P37802;P37802-2;X6RJP6;B7Z5A2 TAGLN2 Transgelin-2 yes no 0 0 2 2 0 1 28.554 28.628 4 0.0035493 5211 20230619_1881_Aki_TMTPro18x_K_F2 85.355 39.637 21716 11150 32493 45343 42931 85789 48808 52558 73126 26442 54950 53345 36251 28184 93269 9710.3 23742 20756 20116 10489 32409 43372 44244 82716 49590 55276 72153 29043 56503 52050 40204 28924 89537 10962 23368 19608 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9295000 14293 1438 13520 27358 21973 21973 1 9606 Homo sapiens 0.06017870688947369 KDVHMPK Unmodified 853.44801 0.44800799 3594;1322 A0A1W2PQS6;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A2R8Y6L3;P46783;Q59GE4;Q9NQ39 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like no no 0 0 1 8 0 1 37.052 37.038 4 0.041189 8272 20230619_1888_Aki_TMTPro18x_K_F8 67.125 32.237 136170 79661 154100 163170 183130 178190 177450 175420 196980 164210 198330 176350 178820 163130 202200 109730 205750 179700 125830 73681 155520 157980 187530 178890 179870 179120 199480 166990 202490 177960 184290 165960 204860 115380 196650 170030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69891000 14294 1322;3594 13521 27359 21974 21974 1 9606 Homo sapiens 0.015421906824485632 KDVLETFTVK Unmodified 1178.6547 0.65468953 810 B4DPP0;A6NNI4;A0A2R8Y478;A0A7I2V3T7;G8JLH6;A0A087WU13;F5GXT1;P21926;A0A7I2V3T0 CD9 Tetraspanin;CD9 antigen yes no 0 0 1 1.5 0.5 1 1 55.536 55.547 3 0.044147 16701 20230619_1880_Aki_TMTPro18x_K_F1 50.592 25.206 93088 89325 99633 141680 156820 147890 130160 112080 115830 133430 140110 133630 137360 110230 177300 129660 129580 130440 86218 82143 101750 138680 157370 148270 132310 117660 119920 133700 142560 134850 142060 115540 176690 130200 124450 123890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 361750000 14295 810 13522 27360;27361 21975 21975 1 9606 Homo sapiens 0.07250836991738652 KDVSGPMPDSYSPR Unmodified 1534.7086 0.70859237 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;A0A140T954 VARS Valine--tRNA ligase yes no 0 0 1 7 0 1 42.261 42.336 3 2.1614E-07 10176 20230619_1887_Aki_TMTPro18x_K_F7 142.95 116.51 64189 48452 53890 53321 53088 65187 64990 60643 66991 75419 89036 77995 89279 65251 79942 89118 85867 74447 59246 44420 55597 53629 55595 64913 64912 62662 69020 75489 90245 78696 90581 69013 81829 88330 82021 70908 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53469000 14296 725 13523 27362 21976 21976 1 9606 Homo sapiens -0.03737358638841215 KDWYDVK Unmodified 952.46543 0.46543219 3694 Q6NXR8;P61247;D6RG13;A8K4W0;B7Z3M5;E9PFI5;H0Y9Y4;H0Y8L7;D6RI02;A4D1I1 RPS3A;LOC402287 40S ribosomal protein S3a yes no 0 0 1 6.5 1.12 1 1 1 1 48.517 48.594 3 0.05135 12889 20230619_1888_Aki_TMTPro18x_K_F8 62.823 40.083 173270 160220 186030 183850 184800 181540 209750 197800 203540 224470 224850 189320 210490 163870 262180 217430 200050 197090 160450 146830 187870 183800 192440 184230 209890 201680 208660 224270 228980 193050 217550 172790 262020 216660 191990 187420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 299840000 14297 3694 13524 27363;27364;27365;27366 21977 21977 1 9606 Homo sapiens -0.012701905109111067 KDYNEAYNYYTK Unmodified 1570.694 0.69398816 1609 Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;A0A6I8PLE7;K7EIH8;K7EK03;K7ESP1;K7ELJ8 DNAJC7 DnaJ homolog subfamily C member 7 yes no 0 0 1 8 0 1 47.225 47.273 3 6.707E-07 12381 20230619_1888_Aki_TMTPro18x_K_F8 148.52 129.92 171230 148390 182800 180490 186440 161630 217100 185200 119210 249760 242060 134820 156000 99761 251610 111170 97906 64267 158480 136090 184740 179480 193520 165580 214190 189330 132330 245100 238300 140960 165970 104860 244910 109410 94928 61662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78887000 14298 1609 13525 27367 21978 21978 1 9606 Homo sapiens -0.06853107515348711 KEAAENSLVAYK Unmodified 1321.6878 0.68778057 3709 V9HW98;P62258;G9K389;G9K388;P62258-2;B7ZA86;K7EM20 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 0 1 8 0 1 47.183 47.232 3 0.0012897 12339 20230619_1888_Aki_TMTPro18x_K_F8 87.18 63.944 19716 24156 23791 20811 31753 24444 31478 24529 22143 25709 30409 15415 21533 14877 50404 17558 13435 14733 18318 22068 23923 21372 32217 24496 31458 25094 23423 25595 30385 16142 23557 15528 48526 17551 13221 14019 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12261000 14299 3709 13526 27368 21979 21979 1 9606 Homo sapiens 0.03980419043796246 KEAEDSLRR Unmodified 1102.5731 0.57308516 3265 O43776;K7EIU7;K7EPK2;B4DF91;B4DGT6;O43776-2;K7EMQ6;K7EJ19 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 2 4.5 0.5 1 1 30.697 30.768 4 0.0016921 5878 20230619_1883_Aki_TMTPro18x_K_F4 86.898 57.94 61977 32535 77737 78227 108660 91634 90471 89743 84726 65075 108370 106700 82365 82799 101890 40693 108940 84631 57301 30197 78092 75341 109630 91580 92128 91179 87456 68361 108970 105550 85886 83946 103290 44254 104000 80006 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124140000 14300 3265 13527 27369;27370 21980 21980 1 9606 Homo sapiens 0.025901543525151283 KEAPPMEKPEVVK Unmodified 1480.796 0.79595081 984 K7EM56;A0A0B4J2B4;S4R417;K7EQJ5;K7ELC2;P62841;S4R456;K7EJ78 RPS15 40S ribosomal protein S15 yes no 0 0 2 8 0 1 44.477 44.495 4 0.0013383 11305 20230619_1888_Aki_TMTPro18x_K_F8 88.561 66.73 61617 56899 57915 68485 68483 62332 75806 65620 68234 75888 74948 59973 69471 57320 81236 71602 63272 60092 56993 52168 59355 68131 70358 63624 75754 67121 70254 75642 76282 61563 71594 59977 81355 71121 60690 57209 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32600000 14301 984 13528 27371 21981 21981 1 9606 Homo sapiens 0.07478467302689751 KEAQELSQNSAIK Unmodified 1444.7522 0.75217174 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 1 7 0 1 42.308 42.383 3 3.2419E-06 10264 20230619_1887_Aki_TMTPro18x_K_F7 134.88 112.65 35771 27356 40981 36929 39299 43112 45570 39170 40380 43134 52785 36322 43719 23539 47372 32762 29226 23072 33102 25129 41151 36592 41080 43031 45433 40407 41914 43156 53078 36789 44949 25243 47024 32287 28096 22039 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68757000 14302 1748 13529 27372 21982 21982 1 9606 Homo sapiens 0.04758574129959925 KEDAENLAAAQR Unmodified 1314.6528 0.65279205 477 A0A024R7X0;Q9Y6D6;B3KMS9;E5RHL7;Q59FY5;E5RIF2;E5RHZ1 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes no 0 0 1 4 0 1 38.85 38.892 3 0.022515 9094 20230619_1883_Aki_TMTPro18x_K_F4 60.161 54.381 60933 47848 60414 63233 67469 76737 66094 68678 81928 68232 76026 78397 83290 65563 74697 76175 82295 77282 56325 43938 61537 62759 69528 76370 67222 70700 82301 69320 78611 78695 84338 68633 76531 76445 78631 73409 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71557000 14303 477 13530 27373 21983 21983 1 9606 Homo sapiens 0.008051762358491033 KEDALLYQSK Unmodified 1193.6292 0.62920306 3617 P50402;A0A804HIV7;Q5HY57;A0A804HLA2 EMD Emerin yes no 0 0 1 7 0.816 1 1 1 46.879 46.952 3 0.0011207 12131 20230619_1887_Aki_TMTPro18x_K_F7 93.958 51.403 558770 428300 451230 514820 599830 636810 624690 612870 725390 632010 723460 667150 732940 587990 729350 765030 727940 658370 515660 392960 469970 514390 612110 634210 631330 628190 732890 638970 742500 673530 747300 618460 741820 759940 696020 626710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 676430000 14304 3617 13531 27374;27375;27376 21984 21984 1 9606 Homo sapiens 0.04013362469322601 KEDGSEVGVGGAQVTGSNTR Unmodified 1946.9294 0.92936084 283 Q53S54;A0A024R475;Q13618-2;Q13618;B7Z600;Q13618-3;H7C399 CUL3 Cullin-3 yes no 0 0 1 3.33 0.471 2 1 38.126 38.174 3 1.3262999999999999E-22 8784 20230619_1883_Aki_TMTPro18x_K_F4 185.23 168.3 69103 45680 54458 59117 59853 59721 63141 64577 90000 83076 91596 107040 107760 89737 68398 122960 115790 102190 63709 41968 56637 58610 61868 60473 64304 66138 90223 83710 94650 107010 107630 94841 73156 121700 110230 97334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150140000 14305 283 13532 27377;27378;27379 21985;21986 21986 2 9606 Homo sapiens -0.006226668485396658 KEDGTFYEFGEDIPEAPER Unmodified 2227.991 0.99095804 3265 O43776;B4DN60 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 1 3.5 1.12 1 1 1 1 55.883 55.915 3 7.5064E-05 17002 20230619_1881_Aki_TMTPro18x_K_F2 86.748 75.487 212320 190370 220340 244660 209590 260650 241130 244620 268290 298430 281360 303380 331880 292930 277130 347300 386810 331810 196510 174680 223190 242790 219610 261910 242210 252460 272550 298860 290400 307380 334710 305320 289180 347070 368660 315520 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 393800000 14306 3265 13533 27380;27381;27382;27383 21987;21988 21987 2 9606 Homo sapiens -0.07391779939916887 KEDINLSVR Unmodified 1072.5877 0.58767259 3937 Q15645;H0YAL2;Q15645-2 TRIP13 Pachytene checkpoint protein 2 homolog yes no 0 0 1 6.5 0.5 1 1 42.638 42.723 3 0.0039789 10362 20230619_1887_Aki_TMTPro18x_K_F7 69.786 33.391 122660 92425 112500 114850 116490 128710 140250 131260 153150 133190 149920 133290 146460 118540 149690 143720 136870 120600 113290 84831 115220 114350 121340 129160 140410 133990 155070 134540 153730 134900 149680 124080 151420 142770 130960 114850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164520000 14307 3937 13534 27384;27385 21989 21989 1 9606 Homo sapiens 0.054282265006804664 KEDIYAVEIVGGATR Unmodified 1619.8519 0.85188578 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;O14992 HSPA4;HEL-S-5a;HS24/p52 Heat shock 70 kDa protein 4 yes no 0 0 1 6 0 1 53.578 53.655 3 1.2874E-10 15485 20230619_1886_Aki_TMTPro18x_K_F6 156.22 137.26 423390 356790 408720 451710 372740 449910 424220 413980 510960 529620 484510 512670 591970 456360 512980 598480 506500 618300 391460 327400 416160 448290 391850 454200 427510 428610 514940 528570 503240 519270 596650 480430 523180 599950 485450 586640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 283370000 14308 3544 13535 27386 21990;21991 21991 2 9606 Homo sapiens 0.06675391743851833 KEDLYLK Unmodified 907.50148 0.50148335 3447 P13639;Q8TA90;Q6PK56;B4DRE8 EEF2 Elongation factor 2 yes no 0 0 1 6 0.816 1 1 1 46.708 46.791 3 0.018713 12087 20230619_1887_Aki_TMTPro18x_K_F7 80.239 34.559 761120 516420 571870 590630 583140 759490 655240 674610 1160100 966460 907250 1444800 1844500 1570800 673140 4229500 800680 2873300 701590 473820 597060 592720 609230 753080 671780 702860 1143800 976830 985740 1455500 1797700 1754000 733200 4119200 779200 2735900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 521260000 14309 3447 13536 27387;27388;27389 21992 21992 1 9606 Homo sapiens 0.04403266665951833 KEDLYLKPIQR Unmodified 1401.798 0.79799972 3447 P13639;Q8TA90;Q6PK56;B4DRE8 EEF2 Elongation factor 2 yes no 0 0 2 2 0 1 46.133 46.212 3 0.0006881 12698 20230619_1881_Aki_TMTPro18x_K_F2 110.74 93.798 136980 111600 137990 130710 118070 140240 137490 132720 138850 161770 180780 151280 167730 108240 157310 131970 128140 100440 126670 102340 139750 130610 124790 140920 137640 136890 143100 161530 182730 152610 170770 114440 158390 130590 122700 95833 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 479130000 14310 3447 13537 27390 21993 21993 1 9606 Homo sapiens 0.11317264102831359 KEDMTYAVR Unmodified 1111.5332 0.53319418 3140 J3KTL2;Q07955;Q59FA2;Q07955-3;Q07955-2;A8K1L8;J3KSR8;A0A2I7N9Y9;B7Z570 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 1 6 0 1 40.142 40.234 3 0.0045445 9607 20230619_1886_Aki_TMTPro18x_K_F6 78.136 52.116 198430 321250 385090 238690 541640 382230 487480 315580 244690 199900 240080 83948 124440 45923 603220 34283 36997 29993 186030 293010 376970 250360 545810 375040 486850 324210 262780 204710 241560 89563 152360 48407 570580 36250 40824 28558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265630000 14311 3140 13538 27391 21994 21994 1 9606 Homo sapiens -0.01811108642414183 KEECPAVR Unmodified 987.48076 0.48076468 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;Q96C96 P4HB Protein disulfide-isomerase yes no 0 0 1 4 0.816 1 1 1 31.731 31.804 3 0.019703 6330 20230619_1885_Aki_TMTPro18x_K_F5 73.985 41.144 126690 74585 179270 174420 277460 279160 209100 256620 217640 151200 250990 286730 194870 208750 254530 92757 244320 230370 117340 69145 179150 169130 278220 273630 215220 260730 222240 162590 253860 281990 203730 211670 256280 103370 233760 217400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 281910000 14312 537 13539 27392;27393;27394 21995;21996 21996 2 9606 Homo sapiens -0.01347646985357187 KEEDRPPLR Unmodified 1138.6095 0.60947067 3646 P53618 COPB1 Coatomer subunit beta yes yes 0 0 2 4.33 0.471 2 1 31.2 31.269 3;4 0.00056031 5998 20230619_1883_Aki_TMTPro18x_K_F4 118.71 85.161 150500 92781 149250 159540 212230 199440 180190 200580 216930 181990 228380 240120 207510 183910 204140 195910 269490 227350 138940 85565 152680 156060 214370 198640 184730 204270 219250 186700 232940 239190 212410 192160 211180 198490 256930 215760 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 211810000 14313 3646 13540 27395;27396;27397 21997;21998;21999 21998 3 9606 Homo sapiens 0.04571031249201951 KEEECQAGAAEMR Oxidation (M) 1523.6344 0.63444114 4369 Q96JB5-2;Q96JB5;Q96JB5-4;J3QL86;J3QQY1;B4DWZ1;J3QS62 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes no 0 1 1 2 0 1 31.189 31.252 3 0.026587 6205 20230619_1881_Aki_TMTPro18x_K_F2 78.932 74.76 22320 14507 16365 20154 27094 24191 28637 25349 29462 20013 25745 26226 26433 23774 22005 23073 28192 25539 20567 13340 17303 19935 27298 24189 28783 25683 29783 20717 26621 26266 26761 24560 22800 23337 26896 24241 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11873000 14314 4369 13541 27398 22000 22000 2750 1 9606 Homo sapiens -0.10643069792695314 KEEECQAGAAEMR Unmodified 1507.6395 0.63952652 4369 Q96JB5-2;Q96JB5;Q96JB5-4;J3QL86;J3QQY1;B4DWZ1;J3QS62 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes no 0 0 1 2 0 1 34.745 34.802 3 0.080136 7629 20230619_1881_Aki_TMTPro18x_K_F2 40.724 24.601 30932 26113 32847 30851 46075 52829 41982 38993 54564 40097 47385 49613 43430 39762 43197 39475 50458 48359 28622 23945 33401 31051 46732 51429 42934 40814 54539 40796 48797 49581 44469 41319 44308 40188 48193 45846 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80260000 14315 4369 13541 27399 22001 22001 1 9606 Homo sapiens -0.09398765930063746 KEEELQAALAR Unmodified 1256.6725 0.67246486 148;1719;4165 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5;Q99529;A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6;Q7Z7R0;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4 MYH9;MYH11;MYH14 Myosin-9;Myosin-11;Myosin-14 no no 0 0 1 4.5 0.5 1 1 46.813 46.872 3 4.3825E-05 12573 20230619_1883_Aki_TMTPro18x_K_F4 134.99 106.01 865030 705930 832280 884290 907480 1004500 1001400 1058800 1165500 1276700 1305100 1238600 1418000 1131000 1154300 1570900 1358400 1315200 799610 647780 849700 880070 939400 1007900 1009600 1083300 1184300 1277200 1336700 1256300 1430700 1193400 1192000 1556000 1297500 1252100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1323000000 14316 148;1719;4165 13542 27400;27401 22002;22003 22002 2 9606 Homo sapiens 0.05439552246616586 KEEELQGALAR Unmodified 1242.6568 0.65681479 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 1 4.5 0.5 1 1 43.272 43.334 3 0.031311 10922 20230619_1885_Aki_TMTPro18x_K_F5 55.98 40.318 53998 40302 54926 48831 56697 59303 56927 49009 65533 67750 72578 68893 73969 60174 64139 76386 75241 69950 49910 36983 55701 48765 58737 58956 57655 51298 66576 67515 74160 69610 74968 63219 66072 76108 71846 66526 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 321880000 14317 3549 13543 27402;27403 22004 22004 1 9606 Homo sapiens 0.04519265729572908 KEEERQEALR Unmodified 1286.6579 0.65787742 4131 Q6PUV4;D6RGY3;D6R960;D6RI05;D6RBA5;D6RAG3;D6RI11;B4DEW3;O14810 CPLX2;CPLX1 Complexin-2;Complexin-1 yes no 0 0 2 3 0 1 29.84 29.934 4 0.00024485 5587 20230619_1882_Aki_TMTPro18x_K_F3 122.86 106.43 50415 29018 51323 25727 6925.1 8979.6 14463 20983 18427 40337 64046 64129 60932 54435 57132 33763 75589 62692 46538 26590 51208 26136 10932 10664 14415 21138 20385 40394 63421 63641 62112 55395 59039 35967 72055 59286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11837000 14318 4131 13544 27404 22005 22005 1 9606 Homo sapiens 0.02601480098473985 KEEGEAFAR Unmodified 1035.4985 0.49852324 473 A0A024R7V6;P61019;P61019-2;A0A0A1HAW1;H7C125;O75546 RAB2;RAB2A Ras-related protein Rab-2A yes no 0 0 1 3 0.816 1 1 1 36.037 36.09 3 0.00061773 7999 20230619_1882_Aki_TMTPro18x_K_F3 112.13 72.399 950790 663090 852180 980970 1040500 1012200 989620 1011100 1290100 1048600 1303100 1267400 1308200 1074600 1129200 1119800 1461600 1267800 877610 609980 877280 964520 1064200 1021200 1010100 1034200 1296800 1064800 1336100 1270300 1326500 1117500 1169500 1133000 1393900 1203300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 966680000 14319 473 13545 27405;27406;27407 22006;22007;22008 22007 3 9606 Homo sapiens -0.017806084588528392 KEEGSFQSCSFCK Unmodified 1592.6599 0.65992761 1985 B3KTR9;A6XAA7;O60565-2;O60565 GREM1 Gremlin;Gremlin-1 yes no 0 0 1 7 0 1 44.646 44.732 3 4.0916E-06 11210 20230619_1887_Aki_TMTPro18x_K_F7 131.96 121.76 116510 126980 145170 134850 72839 78221 105870 97117 114120 268540 232120 244210 247450 195220 214100 173400 240420 163070 108170 116230 143900 134920 82168 83975 105300 102560 121140 261150 233320 246900 250300 201910 219480 174240 229250 155280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68391000 14320 1985 13546 27408 22009;22010 22009 2 9606 Homo sapiens -0.11269595270232458 KEELIGIAYNR Unmodified 1304.7089 0.70885036 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8;H0YJB6 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 1 1 0 1 50.215 50.215 3 0.00097132 14475 20230619_1880_Aki_TMTPro18x_K_F1 80.623 46.245 187760 155240 165980 199410 146400 197220 194840 194440 223710 249710 246880 232490 279720 210480 218860 284070 238420 227850 173460 142480 170380 197680 155270 199440 194570 200330 227330 248840 253480 236160 281350 221790 225070 280960 227860 217050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 647640000 14321 385 13547 27409 22011 22011 1 9606 Homo sapiens 0.06868429143332833 KEELTLEGIR Unmodified 1186.6558 0.65575216 2105 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;B4DNH2;J3KTB5;J3KSZ0;B4DKP9;J3KTN0 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 0 1 4.5 1.12 1 1 1 1 47.427 47.497 3 0.0037884 12798 20230619_1883_Aki_TMTPro18x_K_F4 75.088 45.278 572090 450570 499500 636110 602880 658660 586120 619060 743580 715400 726990 648620 798670 732190 599440 773290 762540 768990 528310 414050 515790 627060 617980 663300 596870 637690 748140 716140 749000 664710 803860 754570 623020 775750 728060 730410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4433200000 14322 2105 13548 27410;27411;27412;27413 22012;22013 22012 2 9606 Homo sapiens 0.06989051360665144 KEELVAEQALK Unmodified 1256.6976 0.69761697 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;B5MCE7 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 1 5.5 0.5 2 2 48.738 48.815 3 6.7666E-05 13635 20230619_1886_Aki_TMTPro18x_K_F6 116.84 0 515000 381350 472310 479370 477950 840020 605640 597690 886980 866600 780980 1032800 1194300 946280 604550 1266600 1250600 1620200 475590 350080 483960 480550 502530 815580 611680 634220 884040 866970 825230 1037600 1178100 996820 664530 1285000 1192900 1533800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 581790000 14323 607 13549 27414;27415;27416;27417 22014;22015;22016 22016 3 9606 Homo sapiens 0.07953607049194034 KEENLADWYSQVITK Unmodified 1822.9101 0.91012895 3402 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 1 7.5 0.5 1 1 61.34 61.376 4 8.8138E-14 18314 20230619_1888_Aki_TMTPro18x_K_F8 172.82 148.23 147140 120260 153000 157410 125260 156920 156770 155220 158720 182050 165550 188430 193360 169310 188570 200620 172910 204020 136100 110410 154560 155910 133250 158620 156380 159440 162030 182690 170960 190270 196230 176920 191050 201270 165810 193630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 398760000 14324 3402 13550 27418;27419 22017 22017 1 9606 Homo sapiens 0.031590285984748334 KEEPSNNVK Unmodified 1043.5247 0.52473799 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9;J3QRG4 KPNB1 Importin subunit beta-1 yes no 0 0 1 5 0 1 34.585 34.672 3 0.033893 7423 20230619_1885_Aki_TMTPro18x_K_F5 54.416 20.62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14325 3904 13551 27420 22018 22018 1 9606 Homo sapiens 0.004716607126283634 KEESHSNDQSPQIR Unmodified 1653.7707 0.77067535 4548 Q9HC35;B5MBZ0;B6EXY3;C1PHA1;J7MA22;C1PHA0;B3XZL9;B3XZM0;A9YLN7 EML4;EML4-ALK variant 7;EML4-ALK;EML4-ALK variant 6;EML4/ALK fusion Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 1 3 0.816 1 1 1 29.238 29.319 4 5.827999999999999E-22 5312 20230619_1882_Aki_TMTPro18x_K_F3 222.75 192.62 27259 15367 30278 26336 36707 38535 27969 32485 30931 28810 43757 49531 45727 37113 35159 21319 53801 49230 25180 14178 30571 25844 37365 37886 28837 33496 31842 29940 44402 48867 46099 37896 36881 23289 51265 46480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 277060000 14326 4548 13552 27421;27422;27423 22019;22020;22021 22020 3 9606 Homo sapiens -0.030059159661504964 KEESISLMK Unmodified 1063.5583 0.5583463 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 1 7 0 1 46.94 47.028 3 0.0020562 12202 20230619_1887_Aki_TMTPro18x_K_F7 85.813 56.855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14327 4191 13553 27424 22022 22022 1 9606 Homo sapiens 0.02910946160181993 KEETQPPVALK Unmodified 1238.6871 0.68705229 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 1 6.5 0.5 1 1 43.596 43.681 3 9.113E-05 10736 20230619_1887_Aki_TMTPro18x_K_F7 122.46 88.817 334320 219680 252840 325770 309210 367790 312050 335880 555990 413900 431960 556090 612660 582470 279970 811670 618950 977430 308130 202140 264930 320580 317730 367810 321840 347430 547400 418990 457200 559370 604630 612030 312350 819350 591410 925290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 517940000 14328 4246 13554 27425;27426 22023;22024 22024 2 9606 Homo sapiens 0.07725624394743136 KEGEEEEENTEEPPQGEEEESMETQE Oxidation (M) 3067.1732 0.17315326 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 ILF2 Interleukin enhancer-binding factor 2 yes no 0 1 1 1 0 1 40.654 40.654 4 5.6073E-05 10338 20230619_1880_Aki_TMTPro18x_K_F1 76.198 74.386 31023 18377 20215 30561 30492 34660 29209 31821 36915 43747 42359 48013 47356 46646 27323 54101 49206 55564 28554 16943 21653 29878 30874 34652 29762 33014 37434 43700 43428 48491 47284 48527 29496 54247 46913 52736 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175170000 14329 2621 13555 27427 22025 22025 1574 1 9606 Homo sapiens -0.2777463920979244 KEGEEEEENTEEPPQGEEEESMETQE Unmodified 3051.1782 0.17823864 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 1 1 0 1 43.937 43.937 3 7.0162E-09 11854 20230619_1880_Aki_TMTPro18x_K_F1 110.31 105.3 28822 22903 22876 29268 22751 33515 28716 28506 38020 36768 39943 51853 51976 46042 30738 55535 55953 59147 26600 21023 23782 29075 23899 33430 28892 29700 38286 37188 41468 51742 51696 48171 33159 55780 53314 56128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82346000 14330 2621 13555 27428 22026 22026 1 9606 Homo sapiens -0.26530335347206346 KEGGLGPLNIPLLADVTR Unmodified 1862.0625 0.062547262 3538 V9HW12;P32119;B4DF70;A6NIW5 HEL-S-2a;PRDX2 Peroxiredoxin-2 yes no 0 0 1 2.5 0.5 1 1 62.723 62.743 3 4.8731E-14 19856 20230619_1881_Aki_TMTPro18x_K_F2 162.65 139.42 532330 583460 680350 581720 621560 602100 657480 588630 454930 541170 664560 471980 438740 397190 923840 312110 320020 315480 494400 533770 677210 588540 649530 607600 655080 601260 483320 547010 661860 479990 477270 407650 894200 317340 312000 299630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 458980000 14331 3538 13556 27429;27430 22027;22028 22027 2 9606 Homo sapiens 0.16599849065914896 KEGQWDCSSCLVR Unmodified 1623.7134 0.71336017 3613 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 1 7 0 1 43.857 43.94 3 0.0098077 10882 20230619_1887_Aki_TMTPro18x_K_F7 67.634 55.658 95103 77646 83520 90093 87449 111150 94650 92552 101440 111670 108830 120220 111330 85300 107920 112370 108010 113780 87849 71196 85922 90235 90861 110350 95243 96350 103330 112060 111520 120400 113310 90611 109840 112550 103380 108040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53380000 14332 3613 13557 27431 22029 22029 1 9606 Homo sapiens -0.07354797767720811 KEGQWDCSVCLVR Unmodified 1635.7497 0.74974567 3613 P49792;A0A8V8TLN4;A0A8V8TMN6 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 1 8 0 1 47.982 48.04 3 0.001906 12680 20230619_1888_Aki_TMTPro18x_K_F8 76.868 59.954 61688 43127 50663 55735 50944 67597 55654 52186 72956 70345 67347 66583 70533 57354 60937 67968 71422 64981 56905 39613 52428 55384 53170 67070 56370 54872 73135 70034 69484 67431 71422 60041 62748 67951 68190 61775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15607000 14333 3613 13558 27432 22030 22030 1 9606 Homo sapiens -0.04269920871024624 KELSDIAHR Unmodified 1067.5724 0.57235688 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;H3BR04;H3BUH7;H3BMQ8 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 1 6.5 0.5 1 1 36.758 36.826 4 5.6423E-05 8272 20230619_1886_Aki_TMTPro18x_K_F6 148.32 107.13 137730 141430 187580 143930 244550 139630 223200 178560 114510 165960 206800 109980 101860 79387 295380 69849 92498 63099 127940 129430 186860 145340 247440 142860 222970 179470 126610 166460 203000 113330 116140 82475 284510 70728 90259 60111 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116160000 14334 3378 13559 27433;27434 22031;22032 22031 2 9606 Homo sapiens 0.04127359703466027 KEMQPTHPIR Oxidation (M) 1251.6394 0.63939059 2805;3511;3535 D0PNI1;P63104;E7EX29;B0AZS6;P63104-2;B7Z2E6;H0YB80;Q2F831;P27348;B4DMT8;Q53S41;B4DY04;V9HWD6;P31946-2;P31946;B5BU24 YWHAZ;YWHAQ;HEL-S-1;YWHAB 14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed no no 0 1 1 7 0 1 23.081 23.18 4 0.0067914 3731 20230619_1887_Aki_TMTPro18x_K_F7 74.306 54.2 68655 45744 74803 81205 98445 99582 79956 82369 104330 77419 110400 95079 87924 85481 95857 59319 100370 86713 63457 42190 75850 79256 99842 98874 82465 85211 105020 79120 111900 95398 90886 87093 97371 61706 95899 82120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53884000 14335 2805;3511;3535 13560 27435 22033 22033 1673 1 9606 Homo sapiens 0.023636469229131762 KENPLQFK Unmodified 1002.5498 0.54983053 3456;2184 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;J7M2B1;P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;Q05CU6;Q6PKD3;P35241-3;E9PNV3;E9PQ82;A0A2R8Y5P0 EZR;HEL-S-105;EZR-ROS1;RDX Ezrin;Tyrosine-protein kinase receptor;Radixin no no 0 0 1 2 0 1 47.134 47.21 3 0.011995 13155 20230619_1881_Aki_TMTPro18x_K_F2 74.165 52.717 293180 347290 374180 379400 469450 391700 531300 368210 369380 373380 382150 257260 335850 254850 629120 290960 293440 282260 272470 317900 374820 380830 479940 395130 526700 378400 386070 373550 389400 266690 357570 265150 614170 292440 283930 268230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 306940000 14336 3456;2184 13561 27436 22034 22034 1 9606 Homo sapiens 0.048657603058586574 KEPAVLELEGK Unmodified 1211.6762 0.67615325 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;B4DNY3;B4DNA3 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 0 1 5 0.816 1 1 1 50.446 50.508 3 0.00031617 14107 20230619_1886_Aki_TMTPro18x_K_F6 105 69.753 786340 659420 783750 813810 821300 929540 884040 786230 860590 999480 966880 942750 1065500 884300 1015200 1112400 982620 1057800 727200 604950 797170 810630 851730 927930 887050 819090 883240 996900 991400 957850 1081600 926290 1032000 1110900 941000 1005000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 886700000 14337 2327 13562 27437;27438;27439 22035;22036 22036 2 9606 Homo sapiens 0.07878222020440262 KEPCVLGVDEAGR Unmodified 1428.7031 0.70311306 3316 Q6UQL6;O75792;Q6IBG3;A0A2R8Y606;A0A2R8Y658 RNASEH2A;JUNB Ribonuclease;Ribonuclease H2 subunit A yes no 0 0 1 4 0 1 43.19 43.234 3 0.031027 10961 20230619_1883_Aki_TMTPro18x_K_F4 53.363 38.673 99748 85497 107820 107050 118320 121440 114220 108780 118960 133680 138870 97444 118920 94952 142970 97081 108670 85816 92323 78440 108990 106540 121850 121450 115590 112660 121790 132660 140450 100550 123040 98193 142800 97069 104140 81711 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46306000 14338 3316 13563 27440 22037 22037 1 9606 Homo sapiens 0.005909625693448106 KEPEKPIDR Unmodified 1110.6033 0.60332266 1418 A0A384ME24;O00422;O00422-2;U3KQ12 SAP18 Histone deacetylase complex subunit SAP18 yes no 0 0 2 5.5 0.5 1 1 34.94 35.011 4 0.022272 7530 20230619_1885_Aki_TMTPro18x_K_F5 68.107 51.883 104980 44925 118610 139960 175640 218260 157580 183850 223010 146450 201680 242840 207240 193300 175390 88716 232280 217440 96891 41990 120390 134290 177710 213660 161950 189100 222340 153090 208400 240110 209970 195560 181530 98369 221590 205220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173790000 14339 1418 13564 27441;27442 22038 22038 1 9606 Homo sapiens 0.05244513017692043 KEPFFHGHDNYDQLVR Unmodified 2000.9493 0.94930842 1352 Q5U5J2;P68400;A0A2R8Y5A0;B2R6D7;E7EU96;Q2I0Y7;A0A2R8YD58;A0A2R8YFU2;B5BUH5;A0A2R8YF43;A0A2R8YDP2;P68400-2 CSNK2A1 Casein kinase II subunit alpha yes no 0 0 1 7 0 1 44.161 44.244 4 3.2204E-07 10996 20230619_1887_Aki_TMTPro18x_K_F7 121.01 111.06 59275 53680 59799 63024 54117 60192 65070 56780 69659 70933 62385 65432 71710 58414 73022 80898 66229 69562 54851 49208 60639 62854 56951 61021 65108 58658 70459 70767 64803 66439 72932 61677 73902 80278 63456 66178 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62499000 14340 1352 13565 27443 22039 22039 1 9606 Homo sapiens -0.011128263272439654 KEPILVCPPLR Unmodified 1320.7588 0.75877744 4236 Q8N5N7;Q8N5N7-2 MRPL50 39S ribosomal protein L50, mitochondrial yes no 0 0 1 2 0 1 49.504 49.563 3 0.035346 14222 20230619_1881_Aki_TMTPro18x_K_F2 53.569 27.91 130490 93344 119700 140680 151240 159700 157590 150280 175020 167010 151180 149000 164870 151770 168340 168930 143330 158030 120480 85878 123100 138340 154740 159790 159010 154630 176440 167390 156860 152170 168050 157330 169750 168900 137480 150160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87865000 14341 4236 13566 27444 22040 22040 1 9606 Homo sapiens 0.11122840547614032 KEPMEALNTAQGAR Unmodified 1514.7511 0.75112588 1884 A0A994J7M8;Q6PI78;A0A994J4W9 TMEM65 Transmembrane protein 65 yes no 0 0 1 7 0 1 42.312 42.387 3 1.4911E-05 10212 20230619_1887_Aki_TMTPro18x_K_F7 116.19 87.827 57746 49578 54702 58699 60921 71525 79165 74368 91758 69931 75886 67405 83548 68117 72119 87783 84297 77769 53389 45460 55964 58712 63321 71405 79103 75652 92050 70886 78880 68653 84483 71284 74292 87293 80492 73995 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52060000 14342 1884 13567 27445 22041 22041 1 9606 Homo sapiens 0.014340364893996593 KEPPKEETAQLTGPEAGR Unmodified 1936.9854 0.98541915 1307 P48634;A0A1U9X982;A0A1U9X9A9;A0A1U9X999;A0A1U9X998;A0A1U9X993;A0A1U9X988;A0A1U9X996;A0A1U9X985;A0A1U9X977;A0A1U9X975;A0A1U9X974;A0A1U9X9A5;A0A1U9X987;A0A1U9X972;P48634-3;P48634-2;B4DLY2 PRRC2A Protein PRRC2A yes no 0 0 2 4 0 1 39.872 39.914 4 0.00040082 9466 20230619_1883_Aki_TMTPro18x_K_F4 76.526 65.912 31543 27329 33084 34688 35387 41062 37316 37366 45872 38500 39519 31842 37333 34841 36398 37866 112600 35670 29189 25075 33528 34507 36649 40946 37777 38452 45974 38674 40699 32760 38263 35992 41200 37882 106470 34185 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56242000 14343 1307 13568 27446 22042 22042 1 9606 Homo sapiens 0.05440586058921326 KEPSTVSRDEVR Unmodified 1401.7212 0.72120596 275;1599 A0A024R3Z1;A0A669KB77;P11137-3;P11137 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 2 4.5 0.5 1 1 31.178 31.249 4 9.732E-05 6015 20230619_1883_Aki_TMTPro18x_K_F4 117.03 67.606 35933 34346 40297 33227 35429 28771 41359 46611 45113 42667 50612 45176 40221 38033 46089 51728 59822 44694 33294 31426 40444 33656 37247 29890 41507 46257 45936 43382 51189 45554 41703 40159 47547 51355 57000 42581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32171000 14344 275;1599 13569 27447;27448 22043 22043 1 9606 Homo sapiens 0.03641420815688434 KEPVSTNAVQR Unmodified 1227.6571 0.65714914 249 A0A024R3K2;Q96CM3-2;Q96CM3;E9PJV3 RPUSD4 RNA pseudouridylate synthase domain-containing protein 4 yes no 0 0 1 7.5 0.5 1 1 34.213 34.25 3 0.013883 7014 20230619_1887_Aki_TMTPro18x_K_F7 66.393 50.853 43029 26857 51057 53509 59410 74212 66396 69008 78079 54945 66720 64159 59387 58021 74336 35168 71842 67498 39790 24822 51362 52068 61290 73268 66889 70458 78327 56609 68686 64467 61603 58861 74963 37654 68732 63783 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31444000 14345 249 13570 27449;27450 22044 22044 1 9606 Homo sapiens 0.05242685449388773 KEQEEEREAIR Unmodified 1415.7005 0.70047052 2145 A8K9X5;Q9UNN5;Q9UNN5-2;B4DEJ6;B3KT28 FAF1 FAS-associated factor 1 yes no 0 0 2 2 0 1 31.407 31.47 4 0.0022595 6297 20230619_1881_Aki_TMTPro18x_K_F2 88.092 61.363 33636 26827 34192 29812 40565 35902 39598 37368 34711 34911 39224 32879 30770 24445 43798 18237 29854 21859 31102 24591 34747 29968 41511 35907 39838 38005 35819 35336 39651 33167 32255 25182 43392 18722 28643 20753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14020000 14346 2145 13571 27451 22045 22045 1 9606 Homo sapiens 0.009248304360426118 KEQTADGVAVIPVLQR Unmodified 1722.9628 0.96283322 1968 A6NFX8;Q9UKK9;A6NJU6;A6NCQ0;H0YEY4 NUDT5 ADP-sugar pyrophosphatase yes no 0 0 1 4.5 3.5 1 1 51.012 51.051 3;4 1.9896E-14 13940 20230619_1888_Aki_TMTPro18x_K_F8 179.25 153.13 115720 82501 109720 106400 100080 117330 110270 118890 93937 128210 120280 113810 114050 96605 122580 111750 117490 106210 106870 75769 111790 105660 105010 117830 110190 121550 97840 128530 121900 115590 116980 101030 124150 111800 112380 100980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 284890000 14347 1968 13572 27452;27453 22046;22047 22047 2 9606 Homo sapiens 0.13027031451974835 KESYSIYVYK Unmodified 1278.6496 0.64960415 721;4226 A0A024RCJ2;Q16778;P33778;P23527;P06899;Q6DRA6;Q6DN03;Q8N257 HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST2H2BD;HIST2H2BC;HIST3H2BB Histone H2B;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Putative histone H2B type 2-D;Putative histone H2B type 2-C;Histone H2B type 3-B no no 0 0 1 2 0.707 1 2 1 50.071 50.116 3;4 0.00061235 14186 20230619_1882_Aki_TMTPro18x_K_F3 100.56 75.767 2327200 3915200 4585500 3403500 4166900 3685800 4652800 2905900 2127200 2923400 3165200 1262900 1775800 913810 7512900 758860 831100 521440 2183400 3574500 4456400 3488500 4353500 3694500 4585300 3028200 2353700 2901200 3138100 1348500 2116700 950100 7132500 773980 857640 498910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5431500000 14348 721;4226 13573 27454;27455;27456;27457 22048;22049 22049 2 9606 Homo sapiens 0.021425331291538896 KESYSVYVYK Unmodified 1264.634 0.63395408 73 U3KQK0;A0A024QZZ7;A0A024RCJ9;A0A024RCL8;B2R4S9;B4DR52;I6L9F7;Q5QNW6-2;Q99879;Q99877;Q5QNW6;P62807;P58876;O60814;Q93079;Q99880;P57053;A8K9J7;Q0D2M2 HIST1H2BN;HIST1H2BD;HIST1H2BK;HIST1H2BI;HIST1H2BM;HIST2H2BF;HIST1H2BC;HIST1H2BH;HIST1H2BL;H2BFS Histone H2B;Histone H2B type 2-F;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-H;Histone H2B type 1-L;Histone H2B type F-S yes no 0 0 1 2.67 0.471 1 2 48.214 48.289 3 0.00011643 13594 20230619_1881_Aki_TMTPro18x_K_F2 127.17 95.68 598170 910830 1046900 635580 1189300 864450 1179600 823260 558450 590400 677120 181230 475400 182000 1925200 142620 147290 111660 559520 830560 1025400 669600 1217200 858210 1170500 838200 609070 596400 680380 203840 556850 187080 1824200 148010 157870 106520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20367000000 14349 73 13574 27458;27459;27460 22050;22051 22050 2 9606 Homo sapiens 0.012222466120874742 KETARPSCEIVDGTR Unmodified 1717.8417 0.8417318 1595 Q92538;Q92538-2;Q92538-3;A0A669KBG8;A0A669KB10;A0A7P0RGV0;A0A7I2YQM2;A0A7I2V2L5;A0A7I2V514;A0A7I2YQ65;A0A7I2V3Y5;A0A7I2V529;A0A7I2V4K2;A0A7I2V2L4;Q05BW6;A0A7I2V2F8;A0A7I2V2U1;A0A7I2YQM0;A0A7I2V4F1 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes no 0 0 2 6 0 1 35.077 35.13 4 1.0729E-07 7668 20230619_1886_Aki_TMTPro18x_K_F6 136.34 121.47 56208 40060 53935 56154 54163 60041 68167 61068 76757 74400 65580 59028 71307 55011 54866 76514 72293 59375 51915 36825 55006 55431 56624 60430 68155 62678 77286 74020 68001 60512 71798 58030 57158 75524 68912 56623 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52533000 14350 1595 13575 27461 22052 22052 1 9606 Homo sapiens 0.01152460746993711 KETEGDVTSVK Unmodified 1191.5983 0.59829686 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 1 3.5 0.5 1 1 39.689 39.738 3 0.0029047 9429 20230619_1883_Aki_TMTPro18x_K_F4 76.196 46.507 73750 38707 96020 99897 133840 160510 104940 133470 107710 83379 140640 173730 114960 122260 135350 57607 159530 147620 68212 35976 96292 96498 135280 156890 107690 136800 110740 89689 141890 170310 119280 124350 138160 64248 152320 139300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53894000 14351 3621 13576 27462;27463 22053 22053 1 9606 Homo sapiens 0.01016164364409633 KETGAASFLCR Unmodified 1238.6078 0.60775611 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1;A0A494C0X4;A0A494C1S4 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 1 2 0 1 43.691 43.774 3 0.0068048 11579 20230619_1881_Aki_TMTPro18x_K_F2 70.622 54.484 288190 238040 291060 265720 309130 341520 322080 301110 333070 222270 231690 210920 227740 205570 267370 192540 255000 192380 266520 218180 295550 267200 319960 338710 324290 308320 334330 228760 242330 214530 234560 211500 270050 193990 243660 182960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179610000 14352 1552 13577 27464 22054 22054 1 9606 Homo sapiens -0.002003458310582573 KEVIPVNVPEAQEEMK Unmodified 1838.9448 0.94479989 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 1 5 0 1 52.779 52.851 3 0.0010612 14979 20230619_1885_Aki_TMTPro18x_K_F5 74.147 55.551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14353 3402 13578 27465 22055 22055 1 9606 Homo sapiens 0.05888528414971006 KEVVEEAENGR Unmodified 1258.6153 0.61534391 2720 P06454-2;Q8TBK9;P06454;B8ZZQ6;Q53S24;Q15202;V9HVW6;Q15204;Q86YS2;B8ZZW7;B8ZZA1;Q15200;H7C2N1;Q7KZ52;Q15203;Q15254;V9HVW7;Q9NYD3;Q9UMZ1 PTMA;PTMAP7 Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 0 0 1 2.5 0.5 1 1 40.198 40.262 3 0.0011502 9893 20230619_1881_Aki_TMTPro18x_K_F2 90.926 73.54 107980 61296 109380 118150 140380 163690 128340 128600 193390 142440 155550 168170 160090 154670 143490 106560 154490 150180 99667 56648 111530 115110 143230 161140 132070 134160 191690 144170 161630 168900 162590 157410 146590 110470 147680 142200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253720000 14354 2720 13579 27466;27467 22056 22056 1 9606 Homo sapiens -0.003619150297708984 KFAEAFEAIPR Unmodified 1277.6768 0.67682195 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 1 1.5 0.5 1 1 55.342 55.352 3 9.9426E-05 16519 20230619_1880_Aki_TMTPro18x_K_F1 121.04 105.28 419010 338310 378330 410810 373910 429300 417820 398820 400160 470220 447300 414970 492900 390830 436540 466190 397440 374440 387110 310360 387850 409160 390020 432020 418300 411520 411000 469600 458530 423030 498600 407980 442900 462140 380490 356700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2253800000 14355 3621 13580 27468;27469 22057;22058 22057 2 9606 Homo sapiens 0.04909061460148223 KFAEALGSTEAK Unmodified 1250.6507 0.65066678 2144;1327 A0A1W6S962;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9;A0A494C0Q7 GTF2I General transcription factor II-I no no 0 0 1 8 0 1 48.285 48.351 4 0.0002589 12827 20230619_1888_Aki_TMTPro18x_K_F8 99.531 47.252 57291 52485 46915 59504 61435 52591 52083 54531 59923 59832 77111 67657 57509 47134 55760 60985 61735 57575 52935 48095 48787 59428 62330 53813 53326 55736 61264 60400 77372 67666 59211 50022 57092 60861 58981 54736 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110350000 14356 1327;2144 13581 27470 22059 22059 1 9606 Homo sapiens 0.035367474980375846 KFAMEPEEFDSDTLR Unmodified 1813.8193 0.81926503 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 1 4 0 1 54.5 54.516 3 1.1106E-05 16011 20230619_1883_Aki_TMTPro18x_K_F4 113.65 102.71 122050 97759 108800 116980 106450 158860 136940 134360 151700 163530 152660 161510 166580 141190 163570 158170 147570 161170 112740 89672 111700 117090 111940 156790 136750 139700 153830 163640 157290 163280 169390 147230 165470 158880 141440 153000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184230000 14357 909 13582 27471 22060 22060 1 9606 Homo sapiens -0.05509183441290588 KFAYLGR Unmodified 853.48102 0.48102268 1419 A0A7I2V5L3;Q9BSQ6;Q53H34;A0A384ME37;M0QYS1;P40429;A0A7I2V2L9;Q5QTS3;Q8J015;Q0VGL3 RPL13A;RPL13a 60S ribosomal protein L13a yes no 0 0 1 5.5 0.5 1 1 44.313 44.398 3 0.037091 11398 20230619_1886_Aki_TMTPro18x_K_F6 68.422 51.191 464710 501940 539090 461840 641980 608310 701060 612340 580630 257480 308700 183020 217640 169630 484680 174340 159050 105420 431140 458920 542530 472260 658760 604630 699330 615910 586320 277420 325390 189380 237350 175700 468460 172340 154960 101050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 317490000 14358 1419 13583 27472;27473 22061 22061 1 9606 Homo sapiens 0.048421407967907726 KFDDENFILK Unmodified 1267.6449 0.64485312 2159 E9PEQ6;A8KAM9;Q9UNP9-2;Q9UNP9;Q9UNP9-3;E9PKY5;B3KSZ1;B4E3F2 PPIE Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase E yes no 0 0 1 6 0 1 55.506 55.582 3 0.00037131 16282 20230619_1886_Aki_TMTPro18x_K_F6 111.91 64.706 123450 101780 121150 132620 126180 171060 149160 140340 180220 158090 145660 165040 165840 142920 154850 173940 184070 197790 114140 93433 123460 131850 131570 169250 149970 145970 180460 159110 152110 166420 168160 149830 159380 175560 175930 187560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36020000 14359 2159 13584 27474 22062 22062 1 9606 Homo sapiens 0.021736489863769748 KFDDFQK Unmodified 926.44978 0.44978213 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 7.5 0.5 1 1 46.466 46.534 3 0.013123 12100 20230619_1888_Aki_TMTPro18x_K_F8 90.71 60.29 777750 578230 696190 727320 782220 870250 889930 849690 1025700 958720 1087800 1123100 1079100 903550 937310 1191300 1242400 1160900 718130 530810 715580 724180 808930 868630 895100 872410 1039400 968120 1112800 1125500 1095100 954350 973830 1190000 1185200 1103300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 940030000 14360 1022;3868 13585 27475;27476 22063;22064 22063 2 9606 Homo sapiens -0.016384770279501026 KFDEALK Unmodified 849.45962 0.45961853 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162;Q7KYX9;H0YHB8 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 1 7 0.816 1 1 1 45.678 45.749 3 0.023195 11574 20230619_1887_Aki_TMTPro18x_K_F7 76.827 23.657 799730 622610 745810 786950 825290 849680 789260 773000 960630 912140 1099700 1093500 1023700 915510 1014700 1127700 1228300 1072000 738850 571480 763400 782010 849890 852890 803430 798950 974180 920060 1118400 1096200 1047300 960980 1044300 1126500 1172000 1019300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 696710000 14361 116 13586 27477;27478;27479 22065;22066 22066 2 9606 Homo sapiens 0.02886710977418261 KFDFDACNEVPPAPK Unmodified 1733.8083 0.80830641 2020;3876 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959;Q14151;A0PJ47 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 1 6.5 0.5 1 1 52.792 52.866 3 0.00049052 14849 20230619_1887_Aki_TMTPro18x_K_F7 87.66 71.354 68326 59611 70386 70395 64755 66065 74777 73405 64326 73385 71261 57663 75466 56134 75183 74992 61490 61853 63221 54656 71238 70181 67884 67330 74528 74489 66458 73653 72907 59267 76792 58986 75701 74329 58968 58887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98112000 14362 2020;3876 13587 27480;27481 22067 22067 1 9606 Homo sapiens -0.029245410249131965 KFDILVTTPNR Unmodified 1302.7296 0.7295858 4710 Q9Y2R4;B3KM65;Q59H21 DDX52 Probable ATP-dependent RNA helicase DDX52 yes no 0 0 1 3.5 0.5 1 1 51.775 51.821 3 9.1274E-05 14954 20230619_1882_Aki_TMTPro18x_K_F3 110.29 92.22 199900 154010 184990 202340 202920 250780 212690 209010 252400 208900 205500 187080 237090 181070 199220 240280 228020 219590 184660 141430 189570 200930 209920 248850 215090 216390 252960 210610 214290 190870 239080 190210 205050 239230 217830 208820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227840000 14363 4710 13588 27482;27483 22068 22068 1 9606 Homo sapiens 0.09033019522985342 KFDQLLAEEK Unmodified 1219.6449 0.64485312 148;3549;1719;4165 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;B4E177;Q68D89;A1L2Z2;A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6;Q7Z7R0;O14729;O14794;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4;Q7Z406;Q7Z406-6;Q7Z406-2 MYH9;DKFZp686D10126;MYH14;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10;Myosin-14 no no 0 0 1 6.67 0.471 1 2 54.209 54.278 3;4 0.00015833 15721 20230619_1886_Aki_TMTPro18x_K_F6 123.31 65.822 1217000 1003400 1213000 1226500 1133300 1378300 1481400 1485800 1550900 1722200 1675800 1713400 1802000 1405800 1592200 2001200 1793400 1910900 1125300 920520 1231800 1222600 1193600 1384400 1475900 1516400 1581900 1726900 1719200 1729700 1824400 1492300 1636200 1995000 1714700 1815500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1578699999.9999998 14364 148;1719;3549;4165 13589 27484;27485;27486 22069;22070 22069 2 9606 Homo sapiens 0.043816489863502284 KFDSSYDR Unmodified 1016.4563 0.45632407 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;Q6ZME7;K7ESG6;K7ELI6;C9JPC3 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10;Peptidyl-prolyl cis-trans isomerase yes no 0 0 1 5.5 0.5 1 1 37.804 37.888 3 0.00076678 8670 20230619_1886_Aki_TMTPro18x_K_F6 128.27 103.8 552490 300710 455610 410340 591230 758470 612580 650750 946780 623370 711520 841750 693200 644340 663550 672450 930620 808940 509060 276710 472850 409920 605690 737540 626400 671030 935040 638820 741060 837390 707490 672420 689960 682990 886980 767340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 788910000 14365 167 13590 27487;27488 22071;22072 22072 2 9606 Homo sapiens -0.05124583867234378 KFEEEGNPYYSSAR Unmodified 1675.7478 0.74781464 1223 Q9HCC0;Q9HCC0-2;A0A804HLJ9;A0A140VK29;A0A804HKE8;A0A804HJ24;A0A804HK37;A0A804HJ84;A0A804HJ31;A0A804HL02;A0A804HJL2;A0A804HJC1 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 1 4.5 0.5 1 1 43.383 43.446 3 6.3512E-12 10962 20230619_1885_Aki_TMTPro18x_K_F5 184.87 159.74 203140 182500 212680 232020 223400 256960 284440 280520 278640 304220 336020 298640 344170 300350 284450 371570 358780 345660 188030 167440 215600 230590 232780 258440 283090 285540 286540 305950 342120 303790 348250 313480 294880 370550 342470 328630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 251260000 14366 1223 13591 27489;27490 22073;22074 22074 2 9606 Homo sapiens -0.06302935083590455 KFEEFQTDMAAHEER Oxidation (M) 1882.8156 0.81557663 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 1 1 2.5 0.5 1 1 41.324 41.392 4 0.056358 10210 20230619_1882_Aki_TMTPro18x_K_F3 48.907 37.637 103730 62903 103490 105830 138480 139310 118770 117500 145050 85409 111620 102680 100240 82391 117290 79563 110990 93682 95759 57998 105670 103710 140470 137780 121690 120690 144740 88685 115570 102810 103460 85530 118400 80926 106140 88893 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280350000 14367 1022;3868 13592 27491;27492 22075 22075 589 1 9606 Homo sapiens -0.09051853215100891 KFEEIPIAHIK Unmodified 1323.7551 0.75507227 3055 H0YL99;Q53GJ8;Q53FX9;P82912-2;P82912 MRPS11 28S ribosomal protein S11, mitochondrial yes no 0 0 1 1 0 1 50.792 50.792 4 0.00024551 14674 20230619_1880_Aki_TMTPro18x_K_F1 102.4 68.511 62894 52663 62813 61442 72801 86304 82571 78411 85263 77387 70702 65472 87440 67487 65652 79969 76066 74286 58164 48287 63978 61669 75120 85187 82743 80596 86150 77932 73912 67107 87639 70249 67794 79806 72667 70624 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140240000 14368 3055 13593 27493 22076 22076 1 9606 Homo sapiens 0.10614494045398715 KFFDANYDGK Unmodified 1203.556 0.55603811 2536 Q15691;B4DM33;A2VCR0 MAPRE1 Microtubule-associated protein RP/EB family member 1 no no 0 0 1 4.5 3.5 1 1 50.109 50.147 3;4 0.00033432 14420 20230619_1880_Aki_TMTPro18x_K_F1 113.65 71.439 146920 120950 130810 155630 115740 141350 142280 131710 150430 181280 184230 163230 171600 129650 175420 146200 151200 113050 135740 111010 134160 154090 122260 143780 142210 136620 154240 179940 186760 165340 175530 135760 176800 144940 144640 107870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 66090000 14369 2536 13594 27494;27495 22077;22078 22077 2 9606 Homo sapiens -0.037597662533016774 KFFLSHPAYR Unmodified 1264.6717 0.671677 3619;2880 P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96;K7EMQ3;E5RHK8;H0YBC6;Q9UQ16-2;Q9UQ16-3;Q9UQ16;Q9UQ16-4;A0A8I5KXV5;B3KPF2;Q9UQ16-5;E5RIK2 DNM2;DNM3 Dynamin-2;Dynamin-3 no no 0 0 1 7.5 0.5 1 1 43.701 43.745 4 0.0001628 10797 20230619_1887_Aki_TMTPro18x_K_F7 126.67 107.06 43760 46320 53613 50264 52329 45324 59918 48672 51423 29175 32604 19930 20380 16725 48025 19185 19640 16400 40613 42410 53593 50411 54495 46337 59691 49020 52030 30278 33781 20591 22475 17496 46623 19180 19044 15618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46304000 14370 3619;2880 13595 27496;27497 22079 22079 1 9606 Homo sapiens 0.049928023882102934 KFGDPVVQSDMK Unmodified 1349.6649 0.66493664 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DNX1 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 1 7 0 1 48.084 48.172 3 0.0022148 12794 20230619_1887_Aki_TMTPro18x_K_F7 78.505 63.304 69454 90419 99256 98898 146330 182450 156070 111180 116260 112840 113290 74403 94225 58877 175960 53645 58757 54661 64687 82747 99133 100230 148470 176480 155410 118600 120600 112840 115490 76767 100360 61113 170340 54462 57323 51921 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183150000 14371 1031 13596 27498 22080 22080 1 9606 Homo sapiens 0.004090766546823943 KFGEEIAR Unmodified 948.50288 0.50288033 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B4DHD2;B7Z5C1;F8WDK9 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 1 6 0 1 40.222 40.314 3 0.033682 9652 20230619_1886_Aki_TMTPro18x_K_F6 61.65 32.177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14372 3981 13597 27499 22081 22081 1 9606 Homo sapiens 0.026569007547209367 KFGFEIIETK Unmodified 1210.6598 0.6597749 2895 E7EQ69;Q9GZZ1;C9J5D1;Q9GZZ1-2;B0AZT5 NAA50 N-alpha-acetyltransferase 50 yes no 0 0 1 2 0 1 57.386 57.402 3 0.0040053 17560 20230619_1881_Aki_TMTPro18x_K_F2 79.492 51.323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14373 2895 13598 27500 22082 22082 1 9606 Homo sapiens 0.06287140854374229 KFGGPGAR Unmodified 788.42932 0.42932146 3200 M0R210;P62249 RPS16 40S ribosomal protein S16 yes no 0 0 1 4 0.816 1 1 1 34.247 34.313 3 0.0094195 7203 20230619_1883_Aki_TMTPro18x_K_F4 81.191 69.469 641680 373350 598950 609210 844400 802810 734870 780800 861080 662110 743280 680500 745940 593500 683510 419460 747790 509940 591950 344170 615580 598120 853950 796520 751180 795660 864950 676380 767830 686710 757980 606220 698060 430480 713210 484250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1617699999.9999998 14374 3200 13599 27501;27502;27503 22083;22084;22085 22084 3 9606 Homo sapiens 0.026643971028988744 KFGLTTSR Unmodified 908.50797 0.50796571 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;B1AHB2 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 1 5.5 0.5 1 1 40.474 40.563 3 0.081397 9764 20230619_1885_Aki_TMTPro18x_K_F5 45.565 27.834 509250 395390 426480 451540 527560 619420 545240 509130 766610 429750 445150 426660 458570 391000 440650 539650 580360 426180 470100 362560 441870 453600 541360 611020 555100 525630 754570 439350 472300 432500 467130 412170 456590 533300 552860 406550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 340900000 14375 2188 13600 27504;27505 22086 22086 1 9606 Homo sapiens 0.05005204617327763 KFGNPGEK Unmodified 875.45012 0.45011648 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DNG2;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;J3QRQ7;J3KTQ4;C1IK54;J3QR02;X6RLV5;J3QKN9 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 yes no 0 0 1 8 0 1 39.574 39.563 3 0.010385 9276 20230619_1888_Aki_TMTPro18x_K_F8 78.556 44.479 167510 82567 209820 207910 263370 303130 227160 236280 259800 186990 260710 239070 251940 204230 217530 110190 263050 209970 154830 76732 210430 200620 268370 297450 232220 244640 262570 193380 266870 239040 255700 207020 223670 118240 250870 198570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119180000 14376 3137 13601 27506 22087 22087 1 9606 Homo sapiens 0.007409426919025464 KFGNPGER Unmodified 903.45626 0.45626449 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 1 7.5 0.5 1 1 34.751 34.785 3 0.04493 7398 20230619_1888_Aki_TMTPro18x_K_F8 66.435 47.337 503730 327620 458090 489970 541830 577460 555750 529590 622080 555070 663860 667800 640100 535410 602780 463570 716920 604160 464840 301510 470590 482400 556530 576050 561560 545130 631350 563140 678150 667960 652240 553050 619040 475430 684060 572760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 186350000 14377 1328 13602 27507;27508 22088;22089 22089 2 9606 Homo sapiens 0.0006746092342382326 KFGTINIVHPK Unmodified 1252.7292 0.72919187 183 A0A024R222;B4DHQ3;Q9Y617;A0A024R280;Q9Y617-2 PSAT1 Phosphoserine aminotransferase yes no 0 0 1 5.5 0.5 1 1 46.778 46.858 4 0.00046151 12511 20230619_1886_Aki_TMTPro18x_K_F6 99.671 74.285 200370 184560 219490 168580 135980 169710 156360 139500 195980 197900 247730 346040 254840 233750 274120 310920 292010 391690 185570 168810 219780 171840 148580 170980 157900 146360 199410 201350 252780 340520 260910 248820 279630 315560 279910 370810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 764360000 14378 183 13603 27509;27510 22090;22091 22091 2 9606 Homo sapiens 0.11293644593774843 KFGTNFTK Unmodified 941.49707 0.49706667 3218 O14530 TXNDC9 Thioredoxin domain-containing protein 9 yes yes 0 0 1 4.5 0.5 1 1 45.58 45.641 3 0.066123 11912 20230619_1885_Aki_TMTPro18x_K_F5 49.5 25.944 131380 114570 127840 125300 127630 171420 140550 130860 176870 141610 140280 113730 131280 102020 116580 137270 120680 107520 121510 104970 130180 126280 133240 168870 142060 136760 176570 141810 145060 116420 133520 107510 119150 135660 115330 102490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77089000 14379 3218 13604 27511;27512 22092 22092 1 9606 Homo sapiens 0.02397802243035585 KFGYVDFESAEDLEK Unmodified 1775.8254 0.82539626 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;B3KM80;Q6ZS99;A0A7I2V2S8 NCL Nucleolin yes no 0 0 1 5.5 1.12 1 1 1 1 59.094 59.137 3 2.9003E-05 17973 20230619_1883_Aki_TMTPro18x_K_F4 101.05 58.031 156050 259890 250010 196480 196100 135810 281630 171910 118950 189230 174390 97997 147980 98347 391460 98884 99351 103590 145950 237060 244980 203340 208860 143350 273920 173960 132860 187330 175280 103730 162880 101710 376040 100580 97912 98327 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 664420000 14380 1658 13605 27513;27514;27515;27516 22093 22093 1 9606 Homo sapiens -0.03148341938072008 KFHGYFK Unmodified 925.48102 0.48102268 486 A0A024R819;A0A024R858;P36639;P36639-3;P36639-2;P36639-1 NUDT1 7,8-dihydro-8-oxoguanine triphosphatase yes no 0 0 1 5 0 1 42.228 42.311 4 0.016602 10487 20230619_1885_Aki_TMTPro18x_K_F5 89.55 68.043 155150 87549 136100 145810 128670 137180 144890 143210 158610 112600 105230 75030 86210 58960 125160 93590 83697 54530 143040 80742 139770 142280 134680 139440 145570 145100 158540 114350 109530 77451 90323 63217 124120 91424 80279 52314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92735000 14381 486 13606 27517 22094 22094 1 9606 Homo sapiens 0.015301407968081548 KFHIGCEK Unmodified 1017.5066 0.5065855 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;A0A994J766;A0A994J588;A0A994J4T8 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 1 2 0 1 39.752 39.822 4 0.031404 9747 20230619_1881_Aki_TMTPro18x_K_F2 66.692 35.618 146800 77284 136240 134940 154040 141120 149780 157050 150690 150860 168900 179030 159130 146630 152640 176110 199720 159220 135360 71349 139490 131570 158250 142580 151370 159160 154210 153600 172090 179380 162540 153770 158040 175510 190360 151560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94291000 14382 1867 13607 27518 22095 22095 1 9606 Homo sapiens -0.0014675274308046937 KFLDAGHK Unmodified 914.4974 0.49740102 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DJ98;A0A8I5KYJ6;A0A8I5KXE2;B4DDM1;A0A8I5KTA1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 1 2 0.816 1 1 1 40.2 40.242 4 0.0099966 9872 20230619_1881_Aki_TMTPro18x_K_F2 77.662 25.181 579780 389320 507590 492860 703270 572010 668440 634920 660960 681730 771430 657730 628760 496150 681160 406930 553400 261990 534960 357570 524280 490470 712450 574380 675700 645430 678240 685450 779430 663000 648110 512310 683040 403480 528710 251440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 577480000 14383 2389 13608 27519;27520;27521 22096 22096 1 9606 Homo sapiens 0.03673221962901607 KFLPGMAIGYSSSK Unmodified 1484.7697 0.76973606 3479 P19623;K7EQ47 SRM Spermidine synthase yes no 0 0 1 6 0 1 55.422 55.498 3 0.00071178 16243 20230619_1886_Aki_TMTPro18x_K_F6 87.519 73.312 110430 91869 102850 104490 69507 91057 94981 99025 81532 171630 154860 130600 174460 131450 130120 177100 167950 144310 102060 84216 104620 104360 75603 93293 94017 102530 87128 168140 156090 134540 175200 138050 135430 175260 160160 137500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28473000 14384 3479 13609 27522 22097 22097 1 9606 Homo sapiens 0.04674198131237972 KFLPLFDR Unmodified 1034.5913 0.59130141 1453;4826 A0A384N6A4;P61604;Q9UNM1;B8ZZL8;S4R3N1 HSPE1;EPFP1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial no no 0 0 1 4.5 0.5 1 1 56.604 56.638 3 0.0038686 16936 20230619_1883_Aki_TMTPro18x_K_F4 96.331 73.591 1366600 1722400 1855500 1620400 2132800 1693700 1792000 1791100 1299600 736120 676570 176660 250310 189370 1803200 134450 144880 60398 1271600 1574400 1846000 1648000 2176100 1712200 1812200 1794900 1326000 783690 704970 206860 341140 192610 1705500 137320 154060 58461 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2793800000 14385 1453;4826 13610 27523;27524 22098;22099;22100 22099 3 9606 Homo sapiens 0.07538941065172367 KFLQEFYQDDELGKK Unmodified 1886.9414 0.94142907 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;P33993-2;A0A0S2Z441 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 2 8 0 1 57.134 57.186 4 2.4926E-07 16620 20230619_1888_Aki_TMTPro18x_K_F8 123.97 101.53 186890 148920 179330 192660 152410 172960 172670 173750 175290 228370 216460 158380 183510 138930 206420 126470 125460 95292 172730 136710 182460 190710 161010 176410 173140 178920 180290 225620 218370 163240 189140 143390 204580 125870 120620 90950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33333000 14386 1091 13611 27525 22101;22102 22101 2 9606 Homo sapiens 0.03343601632559512 KFNALFAQGNYSEAAK Unmodified 1757.8737 0.87368386 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 1 3.5 0.5 1 1 54.931 54.96 3 2.0782E-14 16338 20230619_1882_Aki_TMTPro18x_K_F3 175.61 158.53 305950 281590 306960 324970 297350 312410 328960 342000 314920 392480 348040 277240 367190 259990 397300 299380 235880 198300 283130 258080 311670 324580 310230 317670 329600 348600 323420 390220 356060 286140 374940 271030 394010 294990 226980 189560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 698380000 14387 826 13612 27526;27527 22103;22104 22103 2 9606 Homo sapiens 0.025061964924816493 KFNDPNDPCK Unmodified 1233.5448 0.5448215 4212 Q8IYB8;B7Z611;B1AR60 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes no 0 0 1 6 0 1 40.476 40.568 3 0.0036362 9761 20230619_1886_Aki_TMTPro18x_K_F6 76.165 64.188 162510 121690 163620 175700 223210 227200 213660 199920 230600 228440 260430 257720 250490 206410 223300 240010 276420 241460 150200 111880 167080 173590 226710 225210 216460 206900 235170 230240 265320 258550 254660 216400 230550 240700 263720 229450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44307000 14388 4212 13613 27528 22105;22106 22106 2 9606 Homo sapiens -0.06260911619096987 KFNHDGEEEEEDDDYGSR Unmodified 2169.8359 0.83591396 3006 Q6PJT7;Q6PJT7-5;G3V256;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-10;Q6PJT7-11;Q6PJT7-4;H0YJA2;A0A024R6F2;G3V5I6 ZC3H14;FLJ11806 Zinc finger CCCH domain-containing protein 14 yes no 0 0 1 1 0 1 36.178 36.178 4 2.3997E-30 8447 20230619_1880_Aki_TMTPro18x_K_F1 231.38 228.1 26687 19898 28355 31913 32461 31788 31389 35488 36716 35708 41143 39205 42584 36027 35515 37393 41594 40114 24676 18317 28743 31225 33332 32232 31894 35996 37279 36178 42046 39542 43078 37344 36582 37707 39727 38077 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81577000 14389 3006 13614 27529 22107 22107 1 9606 Homo sapiens -0.20221055812271516 KFNILGTNTK Unmodified 1134.6397 0.63970816 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2YQI1;A0A7I2V4R2;B7ZA24;P40763-3;P40763-2;A0A7I2YQD2;A0A7I2V4R3;A0A7I2V395;A0A7I2V2G1;A0A7I2V552;A0A7I2V4F6;A0A7I2V2T1;B5BTZ6 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 0 1 5.5 0.5 1 1 50.162 50.239 3 0.0011888 14029 20230619_1886_Aki_TMTPro18x_K_F6 78.705 40.983 105230 105440 122130 113820 162770 188220 179110 144510 153520 121620 123370 95076 110850 75354 160900 102120 96042 93501 97573 96552 123280 115260 166190 183670 178710 150060 156560 123410 127410 97153 115710 79900 158830 101900 92502 88909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76030000 14390 1660 13615 27530;27531 22108 22108 1 9606 Homo sapiens 0.07777389914440391 KFPGRPEEEYR Unmodified 1406.6943 0.69426293 1135 B4DRU9;A0A0S2Z5L1;Q9NUQ8-2;Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes no 0 0 2 6 0 1 36.862 36.93 4 0.00054771 8313 20230619_1886_Aki_TMTPro18x_K_F6 101.71 86.167 86182 70513 78075 94975 92970 102350 96254 100400 116190 110520 102520 94824 120510 91061 89130 120750 111460 103920 79628 64753 80315 93964 95521 102880 97469 102950 116740 110700 106530 96903 120880 95673 92589 119830 106370 98909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89476000 14391 1135 13616 27532 22109 22109 1 9606 Homo sapiens 0.0071835699516213936 KFPVTENSK Unmodified 1048.5553 0.55530983 426 P43490;A0A024R718;A0A7P0T9I9;A0A7P0T895;A0A7P0T8L3;A0A7P0T973;A0A7P0TAS5;A0A7P0T931;A0A7P0T862;A0A7P0T8D2;A0A0C4DFS8 NAMPT;PBEF1 Nicotinamide phosphoribosyltransferase yes no 0 0 1 1.5 0.5 1 1 42.367 42.406 3 0.0010048 10930 20230619_1881_Aki_TMTPro18x_K_F2 100.55 61.249 286430 187100 247380 303210 306980 418920 313760 313090 458570 347100 407350 442110 412880 365870 411440 464210 527660 421420 264230 172360 255900 297820 315340 411990 320310 328080 456510 352210 420830 442010 421440 384870 425060 462390 503000 401110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 149930000 14392 426 13617 27533;27534 22110;22111 22111 2 9606 Homo sapiens 0.032974390976505674 KFQILDFTSPK Unmodified 1322.7234 0.72343779 1899 Q9BYD6;A0PJ79;H0Y8N7 MRPL1 39S ribosomal protein L1, mitochondrial yes no 0 0 1 4 0 1 59.44 59.442 3 0.00026217 18077 20230619_1883_Aki_TMTPro18x_K_F4 109 78.17 151880 119020 147180 171360 147200 180700 184760 181200 221570 202240 188610 220910 228480 196930 178860 238740 225640 244230 140370 109400 150100 168810 154090 181920 185200 185670 222340 203880 196990 222530 229650 206130 185660 239370 215560 231840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178080000 14393 1899 13618 27535 22112 22112 1 9606 Homo sapiens 0.07498501291456705 KFSNQETCVEIGESVR Unmodified 1881.8891 0.88907593 3683 Q53FW2;P60891;B1ALA9;A0A2R8Y7H4;A0A6Q8PHK9;B1ALA7 PRPS1 Ribose-phosphate pyrophosphokinase 1 yes no 0 0 1 5.5 0.5 1 1 46.048 46.13 3 2.0385999999999998E-26 12081 20230619_1885_Aki_TMTPro18x_K_F5 239.86 220.79 242950 171190 216560 241520 192140 228300 214130 206790 239770 304110 319140 343190 341130 294720 302690 351960 317380 345950 224260 157390 221960 237870 202320 231300 215560 215460 246260 303220 324810 344890 345610 308580 309570 352310 303720 328550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 343260000 14394 3683 13619 27536;27537 22113;22114 22113 2 9606 Homo sapiens -0.016593047726701116 KFSNQETSVEIGESVR Unmodified 1808.8905 0.89045614 2257 B2R860;P11908;A0A140VK41;P11908-2;D3YTJ7;A6NMS2 PRPS2 Ribose-phosphate pyrophosphokinase 2 yes no 0 0 1 5.5 0.5 1 1 45.536 45.617 3 9.1373E-34 11871 20230619_1885_Aki_TMTPro18x_K_F5 252.38 227.19 314390 229400 293670 347780 352960 478010 370790 343740 405840 446890 493600 509060 473250 422050 465020 478850 464160 493370 290350 211040 301400 342830 363170 470020 373880 363250 415110 448050 501560 510900 483300 441110 473050 481120 444320 468340 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 268490000 14395 2257 13620 27538;27539 22115;22116;22117 22116 3 9606 Homo sapiens 0.018366525877354434 KFSNQYK Unmodified 913.46577 0.46576654 1257 A0A158RFU6;P51149;A0A6Q8PG52;A0A6Q8PH84;C9J8S3;A0A6Q8PGE6;B4DPH9;C9J592;C9J4V0;C9IZZ0;C9J4S4;C9J7D1;A0A6Q8PF79 RAB7A Ras-related protein Rab-7a yes no 0 0 1 3.5 0.5 1 1 39.923 39.972 3 0.033551 9518 20230619_1883_Aki_TMTPro18x_K_F4 69.812 43.397 588980 339340 644120 678240 1119700 1368100 481090 967890 1041700 181210 281350 280930 182930 192180 453620 147660 300470 215830 544030 313770 656860 665050 1110700 1320400 540310 993550 996840 230070 320400 278230 203220 198650 446310 153950 288380 204580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 193720000 14396 1257 13621 27540;27541 22118 22118 1 9606 Homo sapiens 0.005572292089482289 KFVEEQHTK Unmodified 1144.5877 0.58767259 2298 B4E1C9;Q53GS5;B2RBI2;Q96A49 SYAP1 Synapse-associated protein 1 yes no 0 0 1 6.5 0.5 1 1 36.178 36.242 4 0.0010376 8030 20230619_1886_Aki_TMTPro18x_K_F6 104.32 62.68 146150 88252 159330 153180 178170 179100 158670 163660 195330 177330 212280 201490 198230 167110 198070 115540 223250 195440 135020 81408 160960 149620 182930 178730 162330 168610 197530 179250 216320 202130 202730 170920 202310 121710 213170 184890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 165870000 14397 2298 13622 27542;27543 22119;22120 22119 2 9606 Homo sapiens 0.02116226500652374 KFVETPGQK Unmodified 1032.5604 0.56039521 2662 B5BUB5;P05455;E7ERC4;Q14730 SSB Lupus La protein yes no 0 0 1 2.8 2.64 2 2 1 42.224 42.256 3;4 0.0023896 10878 20230619_1881_Aki_TMTPro18x_K_F2 90.05 66.282 936000 729080 911240 1061800 1216600 1218800 1101500 1202900 1381500 1177100 1309500 1293000 1311700 1153900 1131400 1367200 1387000 1252100 865040 670250 933080 1046500 1235900 1220100 1126100 1229000 1388200 1194900 1346700 1303100 1330600 1205700 1169000 1363500 1323700 1190900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1081400000 14398 2662 13623 27544;27545;27546;27547;27548 22121;22122;22123;22124 22123 4 9606 Homo sapiens 0.04541742960304873 KFVIKPIDK Unmodified 1086.6801 0.68011642 3456;2184 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;J7M2B1;Q6PJT4;Q9UK20;Q9UJZ6;Q9UJZ8;Q9UJZ2;Q9UJU1;Q9UJZ7;P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;Q05CU6;Q6PKD3;V9HWC0;P26038;A0A8V8TKR9 EZR;HEL-S-105;EZR-ROS1;MSN;VIL2;RDX;HEL70 Ezrin;Tyrosine-protein kinase receptor;Radixin;Moesin no no 0 0 2 4.5 0.5 1 1 48.871 48.928 4 0.026837 13265 20230619_1885_Aki_TMTPro18x_K_F5 66.595 46.292 1008400 642000 805770 969360 887810 1119500 922710 1056400 1130900 1381800 1383600 1214400 1484200 1077800 863740 1375700 1185300 881890 929620 590970 837730 953390 918600 1118400 935340 1091600 1151700 1373500 1409800 1236200 1480800 1132200 909720 1348800 1128900 843970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1081700000 14399 3456;2184 13624 27549;27550 22125 22125 1 9606 Homo sapiens 0.14024356304844332 KFVLCPECENPETDLHVNPK Unmodified 2425.1406 0.14061594 406 A0A024R6Q1;P55010;Q6IBU0;H0YLZ1;Q32Q19;Q05DF3;H0YN40 EIF5 Eukaryotic translation initiation factor 5 yes no 0 0 1 6.5 0.5 2 2 52.297 52.372 4;5 2.2702E-16 14655 20230619_1887_Aki_TMTPro18x_K_F7 163.66 149.5 304400 228360 282410 287320 275700 343170 321050 304620 351940 370970 337030 373490 368360 320760 312910 392960 359640 372110 281160 209630 288700 286050 288490 341790 322030 315650 356430 371430 348090 377090 372420 336360 322190 392350 343740 353600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 641650000 14400 406 13625 27551;27552;27553;27554 22126;22127;22128 22127 3 9606 Homo sapiens -0.014948741933039855 KFVTETLEDGSR Unmodified 1380.6885 0.68850885 130 A0A024R169;Q9NXF1-2;Q9NXF1;B7Z9D5;B4DQR0;A0A0A0MSR3 TEX10 Testis-expressed sequence 10 protein yes no 0 0 1 5 0 1 46.857 46.934 3 0.043036 12467 20230619_1885_Aki_TMTPro18x_K_F5 49.929 28.372 60117 54375 63679 61680 67861 72630 68984 68638 87888 57843 53346 49917 58518 44569 63229 55432 51549 50524 55652 49830 64439 61859 70187 72537 70058 70101 87020 58858 56582 50873 59749 46751 63524 55286 49428 48043 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49799000 14401 130 13626 27555 22129 22129 1 9606 Homo sapiens 0.013392136928587206 KFYDANYDGK Unmodified 1219.551 0.55095274 702 A0A024RC33;Q15555-4;Q15555-5;Q15555-3;Q15555;K7EL66;K7ERD8;Q15555-2;M0QX52 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes no 0 0 1 7.5 0.5 1 1 46.032 46.095 3 0.0022016 11924 20230619_1888_Aki_TMTPro18x_K_F8 86.313 60.927 42421 32600 41339 42692 32857 41293 43172 38095 39383 52026 54611 47136 48365 39342 52250 47989 47212 31393 39202 29936 41971 42265 35100 41778 42833 39533 40978 51658 55005 47817 49713 41280 52757 47187 45112 30051 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32575000 14402 702 13627 27556;27557 22130 22130 1 9606 Homo sapiens -0.05004070115933246 KFYEQFSK Unmodified 1075.5338 0.53384611 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 1 2.5 0.5 1 1 49.088 49.159 3 0.020279 13754 20230619_1882_Aki_TMTPro18x_K_F3 69.349 34.461 2771300 1833600 2160900 2721900 2186400 2889100 2345300 2908500 3062700 2846100 2872700 2528800 2845800 2349800 1956400 2653400 2620400 1683000 2554800 1687200 2249900 2676400 2280000 2906700 2379300 2966600 3071700 2870200 2951100 2576500 2863000 2444800 2045200 2606100 2494300 1612300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3941399999.9999995 14403 3177 13628 27558;27559 22131 22131 1 9606 Homo sapiens -0.0008994593106308457 KFYPLEIDYGQDEEAVK Unmodified 2042.9837 0.98368782 261 A0A024R3T8;P09874;B4E0E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 1 5 1.41 1 1 1 1 1 59.596 59.634 3 1.5395E-09 17922 20230619_1886_Aki_TMTPro18x_K_F6 138.66 121.51 206810 168510 194730 237470 209470 242060 214780 219930 208000 274090 272230 268440 274440 235940 287790 262660 253980 259500 191130 154830 199300 234070 216610 243850 216170 227680 215170 273790 276440 271600 280580 245860 290410 263470 243370 246490 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 346110000 14404 261 13629 27560;27561;27562;27563;27564 22132;22133;22134;22135 22134 4 9606 Homo sapiens 0.003915322503416974 KGAAIPAK Unmodified 754.47012 0.47012364 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;A0A7I2V2S8 NCL Nucleolin yes no 0 0 1 3 0 1 38.838 38.892 3 0.041627 9122 20230619_1882_Aki_TMTPro18x_K_F3 53.775 18.951 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14405 1658 13630 27565 22136 22136 1 9606 Homo sapiens 0.08306738422504623 KGADIMYTGTVDCWR Unmodified 1771.8022 0.80217518 3439;1072 A0A0S2Z3H3;P12235;A8K787;A0A0S2Z3C4;P12236;Q6I9V5;Q59EI9 SLC25A4;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 0 1 4.5 3.5 1 1 52.27 52.308 3 1.2689E-07 15303 20230619_1880_Aki_TMTPro18x_K_F1 128.9 119.36 174000 183690 204000 198120 189370 203850 235570 228330 207480 215330 204330 164770 211290 159100 257070 188490 182880 177900 161410 168170 204500 199120 198840 206350 234010 231200 212920 216710 210000 169500 217350 166010 256120 188590 175660 169100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154450000 14406 1072;3439 13631 27566;27567 22137;22138 22137 2 9606 Homo sapiens -0.05285382528063565 KGAGSVFR Unmodified 820.45554 0.45553621 3734 P62917;E9PKZ0;G3V1A1;B4DVG7;E9PKU4;E9PP36 RPL8 60S ribosomal protein L8 yes no 0 0 1 4.5 0.5 1 1 36.387 36.456 3 0.087532 8065 20230619_1885_Aki_TMTPro18x_K_F5 44.203 24.441 241800 263640 261950 222320 418560 340650 356560 308270 335470 102440 93111 72244 77356 63536 195160 80681 84844 67916 224200 240890 266430 229800 419540 335240 362100 311690 332700 114060 106430 74647 85055 66756 189650 80464 82127 64704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 455880000 14407 3734 13632 27568;27569 22139 22139 1 9606 Homo sapiens 0.038126662743820816 KGAQDPTAFSVQDPWFCEAR Unmodified 2309.0535 0.053515494 3956 Q1ED39;H3BPL4 KNOP1 Lysine-rich nucleolar protein 1 yes no 0 0 1 7 0 1 57.657 57.709 3 0.00011625 16899 20230619_1887_Aki_TMTPro18x_K_F7 75.533 67.911 17567 15724 17454 15813 15051 14632 16695 17495 20049 19613 17308 10749 19708 14317 18062 17511 15421 13020 16252 14395 17690 15966 15856 14967 16850 17724 20135 19442 17948 11459 19938 14834 18245 17299 14764 12423 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10527000 14408 3956 13633 27570 22140 22140 1 9606 Homo sapiens -0.04864912352695683 KGAVAEDGDELRTEPEAK Unmodified 1913.933 0.93304923 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1;G3V3C7;A0A0C4DGK8;G3V5D9 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 2 2 0 1 40.944 41.017 4 0.025548 10334 20230619_1881_Aki_TMTPro18x_K_F2 55.186 41.731 28406 25263 27608 29145 32365 27436 31122 32621 38887 31910 37244 34364 34837 32455 30340 37232 39650 27520 26274 23156 28181 29106 33155 28021 31696 32948 39085 32372 38158 34734 35447 33760 31479 36784 37763 26286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 322690000 14409 3515 13634 27571 22141 22141 1 9606 Homo sapiens 0.012640029253134344 KGAVECCPNCR Unmodified 1349.5639 0.56385916 3532 P31689;P31689-2 DNAJA1 DnaJ homolog subfamily A member 1 yes no 0 0 1 7.5 0.5 1 1 32.578 32.622 3 0.00034956 6384 20230619_1887_Aki_TMTPro18x_K_F7 102.53 95.329 39468 23186 52558 54687 75324 79894 54575 48583 56251 53259 70184 58908 59455 50153 69707 26456 55425 46046 36531 21498 52646 52873 75817 78107 56296 51941 57762 53784 70832 59212 61465 50802 69666 28222 53104 43562 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27207000 14410 3532 13635 27572;27573 22142;22143 22142 2 9606 Homo sapiens -0.09694021591326418 KGAYDIFLNAK Unmodified 1238.6659 0.66592292 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;B4DSR0;A0A804HJI0 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 1 3 0 1 55.221 55.262 3 0.028877 16513 20230619_1882_Aki_TMTPro18x_K_F3 57.434 32.58 125850 117190 142350 137790 133860 144260 147300 136900 104720 136280 142670 72668 89239 64143 176120 72702 70576 50579 116600 107420 143070 137590 139860 145250 146510 140360 110690 135730 141970 76519 96663 66985 171160 72040 68408 48348 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 270310000 14411 1723 13636 27574 22144 22144 1 9606 Homo sapiens 0.05613659085884137 KGCPPDDIENPR Unmodified 1396.6405 0.6405128 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348;A0A7I2V5T3;A0A7I2V5Z8;E7EQW5;E9PLR6;Q5T3E6;Q5T3E5;E9PQJ2 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 1 3.5 0.5 1 1 36.786 36.836 3 0.00012718 8265 20230619_1882_Aki_TMTPro18x_K_F3 109.84 97.218 173850 133750 159710 172750 216810 221100 213720 205780 275500 212880 243970 239090 226700 183240 218650 225850 247440 223270 160590 122800 164350 171860 220580 219580 217480 211460 275690 215670 250990 239660 231510 193130 224090 226120 236300 212180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 138180000 14412 1647 13637 27575;27576 22145;22146;22147 22145 3 9606 Homo sapiens -0.04194183498862003 KGCVITISGR Unmodified 1089.5965 0.59646314 3205 O00154-4;O00154-6;O00154-7;O00154;O00154-5;B4DUX0;K7EKP8 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 1 4.5 0.5 1 1 40.842 40.908 3 0.013752 9929 20230619_1883_Aki_TMTPro18x_K_F4 67.385 45.639 572070 503170 617060 566010 566670 523760 622610 539430 544120 605540 696470 517920 608990 407750 687530 434870 430830 340880 529570 461120 621870 566290 592820 533710 622360 552110 564930 605500 702650 526270 626760 426110 682150 432290 414080 325100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1264600000 14413 3205 13638 27577;27578 22148 22148 1 9606 Homo sapiens 0.055248768654792 KGDIFLVR Unmodified 946.56 0.56000128 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 1 3 0 1 48.363 48.443 3 0.0089666 13433 20230619_1882_Aki_TMTPro18x_K_F3 83.998 42.569 526800 500870 478380 559070 586460 707560 679300 637490 677140 677210 640180 665140 736570 589780 812210 657550 626020 700790 487240 458850 492300 561760 603500 702560 679200 657150 688800 681940 663370 673020 751780 614740 813460 662670 601290 664880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1227100000 14414 3656 13639 27579 22149 22149 1 9606 Homo sapiens 0.08458368031085683 KGDIIQLQR Unmodified 1069.6244 0.62439245 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 1 1.5 0.5 1 1 43.608 43.649 3 0.00075147 11477 20230619_1881_Aki_TMTPro18x_K_F2 107.79 83.758 686420 490410 566440 604330 701470 758950 767780 737070 873740 646890 673450 644630 689840 578880 767880 770300 731310 646990 633300 450180 587720 603020 719960 755190 773180 752020 875470 658980 701220 652810 707280 609260 777430 764180 699480 616130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 625250000 14415 3402 13640 27580;27581 22150;22151 22151 2 9606 Homo sapiens 0.09236523117237994 KGDIVDIK Unmodified 886.51238 0.51238239 3593 Q6IAX2;P46778;M0R181;G3V1B3;Q59GK9 RPL21 60S ribosomal protein L21 yes no 0 0 1 8 0 1 46.386 46.424 3 0.018163 12058 20230619_1888_Aki_TMTPro18x_K_F8 57.785 4.0339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14416 3593 13641 27582 22152 22152 1 9606 Homo sapiens 0.0645866904022796 KGDLLLNR Unmodified 927.55016 0.55016488 3908 Q15008;Q15008-4;B3KT66;Q15008-3;Q15008-2 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 1 1.5 0.5 1 1 43.211 43.252 3 0.010687 11333 20230619_1881_Aki_TMTPro18x_K_F2 77.732 53.577 431180 326050 385230 447090 476640 534470 480870 434450 586690 261270 276010 225500 239880 198530 340970 322300 298010 216760 398160 299570 396930 442450 488290 531370 487480 446330 578240 272980 296110 230190 250900 212100 342450 316070 284990 207290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 355940000 14417 3908 13642 27583;27584 22153 22153 1 9606 Homo sapiens 0.08349180025709302 KGDLLNAHYDGYLAK Unmodified 1676.8522 0.85222014 4754 Q9Y680-3;Q9Y680;B4DRE2;A0A8I5KRR8;D3DPF8;Q9Y680-1;F8WCU2;F8WBF2 FKBP7 Peptidyl-prolyl cis-trans isomerase FKBP7;Peptidyl-prolyl cis-trans isomerase yes no 0 0 1 1.5 0.5 1 1 50.556 50.582 4 5.0976E-08 14592 20230619_1880_Aki_TMTPro18x_K_F1 140.02 115.83 176920 140940 152500 156230 150000 165980 184790 180330 168210 208630 233780 259890 231400 224190 250280 272830 262820 336140 163380 129190 156940 156740 156920 167480 183850 184010 175030 210760 236940 260300 237320 234950 255020 276820 251850 318330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206590000 14418 4754 13643 27585;27586 22154 22154 1 9606 Homo sapiens 0.040868114637532926 KGDSNANSDVCAAALR Unmodified 1647.7635 0.76348148 2064 A8K548;Q8IZL8;C9JFV4;B4DR36;E7EV54;B4DEX7 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 0 0 1 5.5 0.5 1 1 38.363 38.451 3 2.0734E-14 8884 20230619_1885_Aki_TMTPro18x_K_F5 175.66 161.05 90347 70862 76940 80809 98548 93568 109480 100650 103250 88211 96149 90744 100360 77190 91451 87635 90576 68316 83417 64976 79621 80994 100810 93861 109510 102010 105220 89896 99147 91575 101800 80624 93071 86856 86517 65173 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154570000 14419 2064 13644 27587;27588 22155;22156 22155 2 9606 Homo sapiens -0.03448971838201942 KGDTIYNTR Unmodified 1066.5407 0.5407224 2867;2868 E5KND5;Q96RP9;Q96RP9-2;C9IZ01;D3DNL3;F8WAU4;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 1 7.5 0.5 1 1 35.637 35.667 3 0.0013543 7767 20230619_1888_Aki_TMTPro18x_K_F8 84.687 72.732 95550 66239 92429 107970 113770 116130 124110 138020 163900 124700 135250 155330 143140 117930 127290 122770 161020 154010 88244 61010 94573 105670 116750 117270 125750 139090 163460 127690 140580 154930 145110 123190 131550 125060 153690 145980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217000000 14420 2867;2868 13645 27589;27590 22157 22157 1 9606 Homo sapiens 0.010113669495240174 KGDTWYLVDSR Unmodified 1338.6568 0.65681479 4739 Q9Y4E8-2;Q9Y4E8-3;Q9Y4E8;H0YI31;Q9Y4E8-4;B4DN46;B7Z3J0;F8W0H4;Q2NL66 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes no 0 0 1 8 0 1 49.38 49.452 3 0.003993 13290 20230619_1888_Aki_TMTPro18x_K_F8 77.527 64.326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14421 4739 13646 27591 22158 22158 1 9606 Homo sapiens 0.0010326572955818847 KGDVALPVPYDHQR Unmodified 1593.8263 0.82633974 2158 A8KAM8;P09619;E5RJ14;E5RH16;P09619-2 PDGFRB Platelet-derived growth factor receptor beta yes no 0 0 1 8 0 1 43.236 43.247 4 5.1215E-05 10808 20230619_1888_Aki_TMTPro18x_K_F8 105.46 93.077 29672 22361 27127 28672 27565 28787 32540 26785 28831 30903 26176 20898 30894 18039 24577 35432 22040 23186 27404 20530 27785 28437 28707 29061 32396 27629 29504 30702 27153 21608 31020 19650 25025 34605 21120 22148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35806000 14422 2158 13647 27592 22159 22159 1 9606 Homo sapiens 0.053179620121227344 KGDVEGSQSQDEGEGSGESER Unmodified 2165.8945 0.89449147 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 1 2 0.816 1 1 1 32.982 33.011 3 5.7669E-45 7184 20230619_1880_Aki_TMTPro18x_K_F1 243.16 236.05 64103 31443 90463 83617 134970 204040 97496 141080 116970 85082 134960 170050 123570 135220 131030 53519 143930 150160 59328 29255 90395 81572 136070 195420 101220 146770 118640 91637 137380 167360 127020 136260 133380 60793 137630 141580 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 98943000 14423 4191 13648 27593;27594;27595 22160;22161;22162;22163 22160 4 9606 Homo sapiens -0.14181999237780474 KGDYIEAESSYSR Unmodified 1503.6842 0.68415175 1739 A0A804HKC5;Q53GE7;Q99614;A0A804HHT7;A0A804HIB8;A0A804HKI4;Q53HD9 TTC1 Tetratricopeptide repeat protein 1 yes no 0 0 1 4.5 0.5 1 1 42.029 42.093 3 3.1216E-16 10431 20230619_1883_Aki_TMTPro18x_K_F4 176.98 171.08 300590 251270 289600 384630 361970 369890 353030 348050 349760 407770 428070 386010 461370 354370 344000 512790 460630 435200 277900 231070 296730 376950 369710 374600 356440 358780 359980 408130 436570 392190 464050 375050 359230 507890 439430 414270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238190000 14424 1739 13649 27596;27597 22164 22164 1 9606 Homo sapiens -0.04754295520706364 KGDYLGK Unmodified 779.41775 0.41775372 3468 P17812;A0A3B3IRI2;A0A8Q3WKZ7;B4DMB5;A0A8Q3WL40;A0A3B3IRQ8;A0A3B3ITF6;A0A3B3ITB8;B7Z9C4;A0A3B3ITH9 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 1 1 0 1 41.711 41.711 3 0.060195 10835 20230619_1880_Aki_TMTPro18x_K_F1 59.35 31.176 129910 56759 190210 186640 218490 207870 176200 206640 144280 141630 247440 226360 172170 147660 277050 61142 194720 145380 120230 53117 188550 177850 223040 208350 179410 209430 152720 149050 245800 223160 182910 150380 274100 68307 186760 137370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63101000 14425 3468 13650 27598 22165 22165 1 9606 Homo sapiens 0.019221552889121085 KGEDFVK Unmodified 821.42832 0.42831841 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;P40926-2;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 1 6 0 1 41.515 41.61 3 0.074394 10203 20230619_1886_Aki_TMTPro18x_K_F6 53.775 32.247 2319900 1357000 2275700 2768800 3010100 2917300 2820300 2944500 3364300 2788000 3669700 4030800 3431600 2969900 3650500 2040800 4094700 3896700 2140900 1255100 2329000 2679000 3060900 2937800 2871700 3002700 3406000 2863900 3743400 3995400 3520600 3051300 3723300 2175200 3912100 3682100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2479500000 14426 297 13651 27599 22166 22166 1 9606 Homo sapiens 0.010461379433422735 KGEEALFTTR Unmodified 1150.5982 0.59823728 1890 F8WF48;Q3KR08;A0JLN5;R9WWI7;D3DNQ1;Q99442;F8WCJ7 SEC62;TLOC1 Translocation protein SEC62 yes no 0 0 1 6.5 0.5 1 1 43.213 43.3 3 0.0037288 10632 20230619_1887_Aki_TMTPro18x_K_F7 73.632 54.534 252990 207500 228560 279130 270810 281850 284550 288560 311920 281630 329110 347810 315360 302930 362930 371510 346770 376420 233750 190550 235150 275950 278240 284960 286970 294210 316770 287030 336530 348690 324780 317370 367390 372500 332150 357360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 512640000 14427 1890 13652 27600;27601 22167 22167 1 9606 Homo sapiens 0.02896209155096585 KGEGAPIQGK Unmodified 983.53999 0.53999412 1989 Q9P2E9;A7BI36;V9GY78 RRBP1 Ribosome-binding protein 1 yes no 0 0 1 8 0 1 37.282 37.268 3 0.002545 8408 20230619_1888_Aki_TMTPro18x_K_F8 89.266 68.015 26715 13297 36711 27922 45589 54783 40360 45077 36720 30167 45976 58327 36660 38366 52796 22301 56325 56427 24719 12316 36550 27332 46502 53082 40916 46294 37942 32135 46450 57182 38527 39382 53423 24679 53858 53233 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12683000 14428 1989 13653 27602 22168 22168 1 9606 Homo sapiens 0.04756572300470907 KGEGDAATEQAAPQAPASSEEK Unmodified 2170.9978 0.99783433 3467 Q5U058;P17677;P17677-2 GAP43 Neuromodulin yes no 0 0 1 3 0.707 1 2 1 38.797 38.851 3;4 7.9089E-17 9115 20230619_1882_Aki_TMTPro18x_K_F3 147.93 131.63 492450 345730 421200 568490 149620 134000 244510 242280 289210 333410 447280 553640 382770 392250 445710 393470 524660 550550 454410 318460 430350 549760 179490 170970 243070 243480 298200 338460 449480 546090 396170 409740 456190 404360 501400 521150 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1873899999.9999998 14429 3467 13654 27603;27604;27605;27606 22169;22170;22171;22172 22171 4 9606 Homo sapiens -0.040824670592883194 KGEGLPNFDNNNIK Unmodified 1558.774 0.77396981 4656 Q9UBS4;B3KW63;H7C2Y5 DNAJB11 DnaJ homolog subfamily B member 11 yes no 0 0 1 7.67 0.471 1 2 48.864 48.937 3;4 0.011975 13073 20230619_1888_Aki_TMTPro18x_K_F8 66.797 43.659 190320 166460 198120 216520 198210 214980 217600 218730 258160 244230 223860 248820 259680 193790 217320 266350 250280 267820 176120 152770 200710 214520 206380 217600 219550 223900 259420 245580 233010 250450 261740 205680 223820 266410 239270 254300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 325090000 14430 4656 13655 27607;27608;27609 22173;22174 22173 2 9606 Homo sapiens 0.016933788785536308 KGEGTTTAEAAPATGSKPDEPGK Unmodified 2199.0655 0.065519968 3467 Q5U058;P17677;P17677-2 GAP43 Neuromodulin yes no 0 0 2 5.5 0.5 2 2 38.773 38.86 4;5 9.9635E-14 9090 20230619_1886_Aki_TMTPro18x_K_F6 142.99 121.39 185560 144820 168480 228950 72675 72434 86193 104110 125300 147650 186250 197330 171080 157360 189610 180770 211920 204060 171400 133270 171390 222100 83514 85855 87646 105640 127850 148310 187660 196690 176050 164820 193650 182620 202500 193600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 587410000 14431 3467 13656 27610;27611;27612;27613 22175;22176;22177 22177 3 9606 Homo sapiens 0.01394982871488537 KGEHICLIR Unmodified 1124.6124 0.61244756 2603 B4DVR4;O60504-2;O60504;E5RJP2;Q9BT70;H0YB51 SORBS3 Vinexin yes no 0 0 1 2 0 1 37.483 37.544 4 0.0033926 8716 20230619_1881_Aki_TMTPro18x_K_F2 87.485 46.761 98125 74589 88147 81863 101190 107440 94662 100710 108570 108080 116010 114800 119800 99894 110130 126310 139740 126800 90617 68377 90517 82460 103910 106590 96297 103500 110150 109030 118840 115770 121710 104940 113870 126490 133320 120470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52652000 14432 2603 13657 27614 22178 22178 1 9606 Homo sapiens 0.05512583102381541 KGEITGEVR Unmodified 987.53491 0.53490874 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4;Q6NXF2;H0Y5F3 FLNA;FLJ00119 Filamin-A yes no 0 0 1 5 0.816 1 1 1 36.579 36.647 3 0.0056289 8126 20230619_1885_Aki_TMTPro18x_K_F5 72.652 35.541 523700 307870 473150 515240 756940 771200 658230 670110 857500 647720 777830 854180 750930 673680 695760 514480 825440 766200 483020 283890 489340 506220 761070 757860 675280 690760 858460 662520 801060 850840 764960 692530 714540 534390 788110 725290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 951400000 14433 3484 13658 27615;27616;27617 22179;22180 22179 2 9606 Homo sapiens 0.04064268437866758 KGESDGAYIHR Unmodified 1231.5945 0.59454889 3080 H6QX63;I3L0U5;Q6PK04 CCDC137 Coiled-coil domain-containing protein 137 yes no 0 0 1 5 0 1 32.108 32.188 4 8.7179E-05 6465 20230619_1885_Aki_TMTPro18x_K_F5 127.17 85.173 39354 35604 40866 48835 68667 56979 57394 49681 51610 41745 49318 38099 44045 38864 52527 32018 40581 25836 36425 32690 41836 48309 68640 56872 58313 51071 52797 42530 50432 38895 45513 39689 52484 32025 38841 24658 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26512000 14434 3080 13659 27618 22181 22181 1 9606 Homo sapiens -0.011984606187752433 KGESGQSWPR Unmodified 1130.5469 0.54687041 647 A0A024RB32;Q15185-4;Q15185;A0A087WYT3;B3KUY2;Q15185-3;B4DDC6 PTGES3 Prostaglandin E synthase 3 yes no 0 0 1 4.5 3.04 1 1 1 1 35.781 35.81 3 0.00082998 8254 20230619_1880_Aki_TMTPro18x_K_F1 85.845 68.819 497520 441560 505900 437520 590230 571330 556410 547240 577610 584270 580670 471660 587870 443970 572660 436910 499960 342960 460350 404200 513950 444410 604760 567500 563760 561470 587680 585070 595300 483040 598460 458730 577750 434530 477970 327310 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4650300000 14435 647 13660 27619;27620;27621;27622 22182;22183;22184 22182 3 9606 Homo sapiens -0.01318114818968752 KGESQTDIEITR Unmodified 1375.6943 0.69432251 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 1 3.5 0.5 1 1 38.689 38.736 3 4.3012E-18 9005 20230619_1883_Aki_TMTPro18x_K_F4 194.51 164.45 385390 249340 327750 391400 387840 492190 414700 380400 561830 496190 549890 647060 617610 493820 167140 561190 268580 657780 355460 229620 339120 384530 399730 487140 420940 399610 563400 500080 567530 644410 606450 518180 185860 567040 258690 622320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 537820000 14436 2435 13661 27623;27624 22185 22185 1 9606 Homo sapiens 0.021503122045032796 KGESQTDIEITREEDFTR Unmodified 2153.0237 0.023655153 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 2 2.83 1.07 1 1 2 2 43.423 43.476 3;4 7.014399999999999E-38 11129 20230619_1882_Aki_TMTPro18x_K_F3 244.32 220.48 199130 158910 188410 180060 178520 209860 186110 189680 197170 227210 224520 241970 263340 213690 209040 249580 284380 272950 184020 145690 192080 180570 186540 209510 187680 196160 201550 228020 230860 243950 264940 223340 217890 251410 271290 259040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4321100000 14437 2435 13662 27625;27626;27627;27628;27629;27630 22186;22187;22188 22187 3 9606 Homo sapiens -0.006735728170497168 KGEVQTVASTQDLR Unmodified 1530.8002 0.80018457 1759 A0A8I5QKX4;A0A8I5KRB5;A0A8I5KRR0;A0A994J7A5;O95625 ZBTB11 Zinc finger and BTB domain-containing protein 11 yes no 0 0 1 6 0 1 40.889 40.983 3 2.9693E-05 9960 20230619_1886_Aki_TMTPro18x_K_F6 110.56 99.453 43008 34380 44140 47895 44716 41887 51433 45637 50644 61127 61898 59676 64689 48455 48380 73151 63330 66485 39771 31586 44771 47174 46502 42916 51449 46805 52137 60872 63067 60295 65121 51682 50448 72658 60471 63207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44006000 14438 1759 13663 27631 22189 22189 1 9606 Homo sapiens 0.05601648049969299 KGFDQEEVFEKPTR Unmodified 1708.842 0.84204938 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 2 5.5 0.5 1 1 46.412 46.492 4 0.081897 12376 20230619_1886_Aki_TMTPro18x_K_F6 45.14 32.78 244010 216970 267210 250510 202280 216630 229760 194530 213170 256690 317000 281820 271600 243590 339990 237560 301660 245960 225930 198870 268390 249900 215790 221260 229770 202170 222270 256790 318300 283680 281860 252140 341810 239690 288610 233730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103870000 14439 2484 13664 27632;27633 22190 22190 1 9606 Homo sapiens 0.01598203738490156 KGFIGPGIDVPAPDMSTGER Oxidation (M) 2059.0044 0.004440036 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;P00367-3;A0A804HJD7;B3KT18;A0A804HKE0;P00367-2;Q59FQ4 GLUD1 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase yes no 0 1 1 6.5 0.5 1 1 52.305 52.38 3 0.0015895 14675 20230619_1887_Aki_TMTPro18x_K_F7 77.959 74.119 42469 39204 44813 43924 54018 44190 54689 48845 45842 43984 52466 42615 39456 34900 56408 31485 39400 28726 39319 35920 45446 44002 55233 44826 54829 49467 47449 44655 52925 43072 41468 36064 55981 31636 37788 27352 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60689000 14440 2542 13665 27634;27635 22191 22191 1545 1 9606 Homo sapiens 0.01729799358327 KGFIGPGIDVPAPDMSTGER Unmodified 2043.0095 0.0095254139 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;P00367-3;A0A804HJD7;B3KT18;A0A804HKE0;P00367-2;Q59FQ4 GLUD1 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase yes no 0 0 1 7.5 0.5 1 1 55.689 55.75 3 7.9582E-23 16047 20230619_1887_Aki_TMTPro18x_K_F7 188.86 179.11 70293 68047 77626 84958 74857 81625 97620 88902 78385 84978 92788 82639 71024 63741 107040 59313 64522 49639 65129 62402 78265 84373 78479 82963 96518 90252 81508 85968 93592 83333 74846 66106 105590 59319 62042 47304 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88031000 14441 2542 13665 27636;27637 22192 22192 1 9606 Homo sapiens 0.02974103220935831 KGGPSPGDVEAIK Unmodified 1253.6616 0.66156582 3422 Q53G61;Q53G21;P09661;H0YLR3;H0YMA0 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 1 6.5 0.5 1 1 44.341 44.428 3 0.00071342 11442 20230619_1886_Aki_TMTPro18x_K_F6 90.476 57.419 274300 217600 247890 277240 282520 327860 297970 273750 343230 322610 383760 353610 392260 319930 311600 436100 434740 381160 253390 199730 254740 275660 291370 326410 300910 284800 348610 324490 391890 356790 396260 337220 325740 432920 414400 362810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253740000 14442 3422 13666 27638;27639 22193;22194 22193 2 9606 Homo sapiens 0.04488149872304348 KGGSWIQEINVAEK Unmodified 1557.8151 0.81510635 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 4.5 3.5 1 1 54.465 54.532 3 3.7834E-05 15499 20230619_1888_Aki_TMTPro18x_K_F8 107.46 61.668 122600 108690 127250 126450 106330 146150 132310 136470 141410 165520 154350 156400 154600 136490 160460 164090 151480 162900 113460 99632 128600 126530 113010 146020 132250 140830 144190 165400 157820 158480 158060 142900 162590 164390 145100 154690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204150000 14443 3758 13667 27640;27641 22195;22196 22196 2 9606 Homo sapiens 0.05851139917967885 KGHAVGDIPGVR Unmodified 1204.6677 0.66765425 2062 D6RD47;A8K517;P62266 RPS23 40S ribosomal protein S23 yes no 0 0 1 1.5 0.5 1 1 36.248 36.277 4 0.00021041 8497 20230619_1880_Aki_TMTPro18x_K_F1 104.17 92.198 530830 52929 490540 524900 608910 390850 666280 559920 493830 521930 583990 425280 568280 430350 444200 510550 376810 395960 487850 53308 503390 488720 621900 409010 662950 559720 516590 526290 593160 436980 573960 448160 450560 505260 361310 377230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 883850000 14444 2062 13668 27642;27643 22197;22198 22197 2 9606 Homo sapiens 0.07350712894526623 KGIGPVYSSK Unmodified 1034.576 0.57604528 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 0 1 4 0 1 42.653 42.697 3 0.0075142 10705 20230619_1883_Aki_TMTPro18x_K_F4 71.085 38.138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14445 351 13669 27644 22199 22199 1 9606 Homo sapiens 0.06014029477319127 KGIVDQSQQAYQEAFEISK Unmodified 2168.075 0.074962442 2805 D0PNI1;P63104;B0AZS6;P63104-2;B7Z2E6;H0YB80 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 1 8 0 1 57.669 57.721 4 2.2172E-24 16825 20230619_1888_Aki_TMTPro18x_K_F8 194.49 177.83 79802 71030 79070 77509 61543 87606 77794 73608 82975 98067 104630 100640 100850 88499 105480 88218 85966 88505 73825 65073 80131 77904 65902 87482 77703 76836 85143 97863 106170 101600 103240 91662 106010 88752 82458 84050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1084400000 14446 2805 13670 27645 22200 22200 1 9606 Homo sapiens 0.0376479594765442 KGNFNYIEFTR Unmodified 1387.6884 0.68844927 3147 Q53HL1;J3QRS3;P19105;O14950 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B yes no 0 0 1 2.5 0.5 1 1 50.424 50.487 3 0.00047386 14304 20230619_1882_Aki_TMTPro18x_K_F3 96.604 73.687 521100 426320 523790 504880 457850 575430 592980 568800 644620 671730 601070 584170 688890 558080 597680 688690 580810 505840 481860 390980 530900 504540 484920 576250 591680 584220 652420 670690 622490 596170 695710 583360 608920 679610 555360 482670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1050499999.9999999 14447 3147 13671 27646;27647 22201 22201 1 9606 Homo sapiens 0.010112584835042071 KGNMDEAHIDQVR Oxidation (M) 1527.71 0.70998935 3956 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 yes yes 0 1 1 3.5 0.5 1 1 32.668 32.732 4 0.045665 6669 20230619_1882_Aki_TMTPro18x_K_F3 56.599 30.164 32561 23462 27214 34198 40338 38631 36272 33026 37179 39483 41437 43173 43051 34973 40167 39604 41281 40122 30045 21576 28322 33686 40713 38606 36826 34314 38022 39666 42400 43366 43734 36596 40952 39761 39478 38107 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48111000 14448 3956 13672 27648;27649 22202 22202 2624 1 9606 Homo sapiens -0.032757245500988574 KGNMDEAHIDQVR Unmodified 1511.7151 0.71507473 3956 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 yes yes 0 0 1 4 0 1 36.481 36.527 4 8.3744E-06 8147 20230619_1883_Aki_TMTPro18x_K_F4 121.79 103.06 37607 27835 36193 35610 41718 42077 39120 35584 50141 38061 41821 44974 45944 40138 39907 50697 56463 47200 34743 25557 36955 35407 42816 41919 39926 36883 50097 38580 43497 45192 46506 42105 41655 50550 53799 44902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49975000 14449 3956 13672 27650 22203 22203 1 9606 Homo sapiens -0.020314206874900265 KGPEADSEWR Unmodified 1173.5415 0.54145068 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 3 0 1 38.071 38.125 3 0.026554 8807 20230619_1882_Aki_TMTPro18x_K_F3 47.062 30.036 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14450 3152 13673 27651 22204 22204 1 9606 Homo sapiens -0.038378384014322364 KGPGEVAGTVTGQK Unmodified 1327.7096 0.70957864 4184 Q86U44;B3KSH0;F5H6D8;B4DTN4;B4E2F6;H0YFV6 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes no 0 0 1 8 0 1 41.677 41.674 3 0.00034305 10152 20230619_1888_Aki_TMTPro18x_K_F8 92.939 65.825 23068 13750 14350 19449 22720 21577 18805 17024 24713 21986 24898 23507 24714 20094 22314 24571 26519 25239 21227 12652 15452 19184 22839 21559 19360 17849 24846 22013 25515 23686 25112 21082 22976 24651 25324 23969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25406000 14451 4184 13674 27652 22205 22205 1 9606 Homo sapiens 0.05883223792375247 KGPGLAVQSGDK Unmodified 1155.6248 0.62478638 1111 A0A0S2Z4Z0;Q96PK6;Q59GV2 RBM14 RNA-binding protein 14 yes no 0 0 1 4.5 3.5 1 1 40.514 40.51 3;4 0.00064453 10301 20230619_1880_Aki_TMTPro18x_K_F1 93.228 69.198 487070 328380 464290 484930 541600 595290 560590 541640 680440 559510 564850 502970 587700 454680 518190 566200 633150 536140 449710 302110 474860 478120 557140 592160 567680 557460 681560 563100 585510 511800 595650 476750 534710 565390 604010 509900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 387750000 14452 1111 13675 27653;27654 22206;22207 22206 2 9606 Homo sapiens 0.05319898046423077 KGPGPGGPGGAGVAR Unmodified 1233.6578 0.65781785 254 A0A024R3M7;Q92686 NRGN Neurogranin;NEUG(55-78) yes no 0 0 1 2.5 0.5 1 1 33.35 33.412 3 6.2718E-08 6919 20230619_1882_Aki_TMTPro18x_K_F3 137.39 109.96 49011 65682 89500 61411 125600 86929 139400 98225 73260 87874 76163 21092 60218 21053 126990 15512 18293 11821 45810 60027 87913 62834 127240 86406 137590 99310 78596 87261 77128 24517 64784 21635 121340 15839 18508 11290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90494000 14453 254 13676 27655;27656 22208 22208 1 9606 Homo sapiens 0.05033524889131513 KGPQEVGPQGPAVPSGGGR Unmodified 1773.9122 0.91219463 1019 E7EXA6;Q96S08;A0A0D9SF58;Q8WVB6;Q8WVB6-2;Q8WVB6-3 CHTF18;RUVBL Chromosome transmission fidelity protein 18 homolog yes no 0 0 1 8 0 1 38.919 38.906 3 1.218E-07 9029 20230619_1888_Aki_TMTPro18x_K_F8 115.91 109.87 23905 19441 18223 21271 24357 30258 26387 24401 30270 22993 25345 23955 32161 22092 25185 26596 26627 23269 22060 17817 19102 21446 24913 29775 26591 25295 30404 23364 26521 24227 32240 23107 25817 26467 25440 22148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35824000 14454 1019 13677 27657 22209 22209 1 9606 Homo sapiens 0.05619502126955922 KGPSTVTDLEDTK Unmodified 1389.6987 0.69873919 1042 O94973-2;O94973;B7Z5S9;A0A0G2JS82;B7Z1Q4;O94973-3;A0A8I5KPP9;A0A0G2JQM1 AP2A2 AP-2 complex subunit alpha-2 yes no 0 0 1 4.5 0.5 1 1 45.329 45.39 3 0.0001394 11814 20230619_1885_Aki_TMTPro18x_K_F5 97.065 77.488 74372 44380 56169 71222 44525 57432 55292 72704 90834 102490 103060 131780 124070 108850 68443 173120 141130 150210 68514 40897 58488 69505 47647 59422 56287 73993 91080 102830 106180 131700 123430 116360 75175 171320 134390 142880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164470000 14455 1042 13678 27658;27659 22210 22210 1 9606 Homo sapiens 0.019477766273894304 KGQAVDYEGSR Unmodified 1208.5786 0.57856447 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 1 5 0.816 1 1 1 34.482 34.543 3 0.0043485 7340 20230619_1885_Aki_TMTPro18x_K_F5 72.089 69.111 60876 31328 70326 72159 111200 117390 88385 110550 101060 78925 124760 128800 114990 101570 122350 51232 119440 111810 56233 29057 71276 70029 111600 115020 90894 112470 103060 82982 126510 127470 118010 103050 123720 55941 114250 105580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 657710000 14456 909 13679 27660;27661;27662 22211 22211 1 9606 Homo sapiens -0.017381668556936347 KGQDSIEPVPGQK Unmodified 1381.7201 0.72014333 4583 Q9NR50;Q9NR50-3;Q9NR50-2 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes no 0 0 1 6 0 1 41.345 41.439 3 0.0020979 10158 20230619_1886_Aki_TMTPro18x_K_F6 74.678 55.846 27363 33229 35930 29943 47991 33442 37724 30199 33614 29766 30025 20059 30372 17649 59791 21076 23129 23982 25444 30367 35905 30596 48422 33562 38499 31082 34351 29820 30994 20745 32287 18522 58043 21410 22490 22744 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17837000 14457 4583 13680 27663 22212 22212 1 9606 Homo sapiens 0.0445520644680073 KGQSEEIQK Unmodified 1045.5404 0.54038805 1864 C9JXB8;A0A994J4A5;C9JNW5;V9HW01;P83731 RPL24;HEL-S-310 60S ribosomal protein L24 yes no 0 0 1 5 0 1 36.266 36.358 3 0.027379 8033 20230619_1885_Aki_TMTPro18x_K_F5 68.893 36.564 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14458 1864 13681 27664 22213 22213 1 9606 Homo sapiens 0.019439472296653548 KGQTHTLEDFQR Unmodified 1458.7215 0.72154031 1085 A0A0S2Z410;Q99714;A0A804HHW5;Q99714-2;Q5H928;A0A0S2Z434 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 1 6.5 0.5 2 2 36.319 36.383 3;4 6.5102E-07 8144 20230619_1886_Aki_TMTPro18x_K_F6 152.47 121.92 67885 50899 64300 75808 85310 77935 88916 88653 96399 89290 87090 80174 87904 70975 77679 88174 99830 77472 62711 46811 65994 74513 86917 78905 89647 89833 97422 89922 89779 81520 89206 74436 80439 87710 95147 73779 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 949780000 14459 1085 13682 27665;27666;27667;27668 22214;22215 22214 2 9606 Homo sapiens 0.010528405355444193 KGTDIMYTGTLDCWR Unmodified 1815.8284 0.82838993 3388 P05141;Q6NVC0 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes no 0 0 1 1.5 0.5 1 1 54.911 54.923 3 8.4979E-19 16381 20230619_1880_Aki_TMTPro18x_K_F1 204.13 191.34 323840 379800 438400 373780 339510 409270 526180 451680 376130 435770 335010 246030 378670 243290 521280 289810 267830 244980 301140 347350 434120 378930 364910 412260 515020 458110 390460 435230 347510 258350 391020 254020 512270 288770 258550 233240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 435470000 14460 3388 13683 27669;27670 22216;22217 22216 2 9606 Homo sapiens -0.046891133565850396 KGTDIMYTGTLDCWR Oxidation (M) 1831.8233 0.82330455 3388 P05141;Q6NVC0 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes no 0 1 1 8 0 1 50.968 51.045 3 0.0023948 13965 20230619_1888_Aki_TMTPro18x_K_F8 94.544 77.602 250650 292530 322380 297950 351780 328430 407790 345330 284910 279010 265580 173620 254860 165850 360540 199710 177890 168040 232940 267620 321820 301130 363470 330490 404030 349950 296520 282230 272680 181060 264890 173440 353790 198930 171900 159980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237930000 14461 3388 13683 27671 22218 22218 1996 1 9606 Homo sapiens -0.05933417219216608 KGTHFVQLCCQR Unmodified 1532.734 0.73403603 1223 Q9HCC0;Q9HCC0-2;A0A804HLJ9;A0A140VK29;A0A804HKE8;A0A804HJ24;A0A804HK37;A0A804HJ84;A0A804HJ31;A0A804HL02;A0A804HJL2;A0A804HKH3 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 1 5 0 1 37.499 37.592 4 0.0016683 8536 20230619_1885_Aki_TMTPro18x_K_F5 86.114 79.838 34399 31489 33230 34003 48338 55337 45250 45989 64903 19988 22377 20499 20780 18613 30122 19947 25284 18679 31823 28842 34093 34418 48984 54116 46362 46914 63164 21708 24895 20753 21728 19326 30139 19990 24193 17779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41364000 14462 1223 13684 27672 22219 22219 1 9606 Homo sapiens -0.011021625973853588 KGTPWEGGLFK Unmodified 1218.6397 0.63970816 2061 H3BQQ9;A8K503;Q7KZS0;B0QYN7;P63279;H3BPC4 UBE2I SUMO-conjugating enzyme UBC9 yes no 0 0 1 2.5 0.5 1 1 54.024 54.065 3 0.0016813 15914 20230619_1882_Aki_TMTPro18x_K_F3 86.467 48.745 808490 652190 678620 660880 691880 839580 793140 853370 939880 467190 430140 334890 453880 374550 565500 472000 453480 343590 746530 597330 700380 669610 721440 835700 798180 860120 927410 489680 466070 348140 467870 390190 566330 465950 434210 328110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 747260000 14463 2061 13685 27673;27674 22220 22220 1 9606 Homo sapiens 0.039133899144189854 KGTVEGFEPADNK Unmodified 1390.6729 0.67285879 3560 P37108;H0YLA2 SRP14 Signal recognition particle 14 kDa protein yes no 0 0 1 4.5 0.5 1 1 44.629 44.69 3 3.567E-05 11464 20230619_1885_Aki_TMTPro18x_K_F5 116.11 85.283 280360 206820 243620 247080 345060 368770 328960 327890 392720 302590 323160 320750 396240 327930 307480 402690 409610 359560 258800 189770 252100 247830 350030 362740 334450 336990 393560 307990 337950 325320 397950 341950 320360 400790 390570 342150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2522400000 14464 3560 13686 27675;27676 22221 22221 1 9606 Homo sapiens -0.006850728241715842 KGTVYLTPYR Unmodified 1196.6554 0.65535823 523 K7EIJ0;B4DFL8;B4DV07;K7ENL2;A6NG10;K7EMC9;Q7Z511;A0A024R8L1;Q969T9-2;Q969T9 WBP2 WW domain-binding protein 2 yes no 0 0 1 5 0 1 44.38 44.459 3 0.032636 11427 20230619_1885_Aki_TMTPro18x_K_F5 56.951 35.193 62798 63923 59176 64782 91464 113610 89239 83177 138940 26198 33340 33647 30832 25678 42811 31918 35701 34917 58129 58499 60967 65989 92591 110450 91491 85548 134130 30016 39084 33612 32164 27081 42869 32177 34222 33135 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78755000 14465 523 13687 27677 22222 22222 1 9606 Homo sapiens 0.06489676431442604 KGVAINFVTEEDKR Unmodified 1604.8522 0.85222014 3883 Q14240;Q14240-2;Q9NZE6;Q96B07 EIF4A2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 0 2 4.5 3.5 1 1 47.956 47.985 4 2.0509E-11 12656 20230619_1888_Aki_TMTPro18x_K_F8 174.24 155.18 392290 545300 556460 428240 414960 378640 581110 450220 432010 547670 532400 336290 454920 324080 837040 310310 314310 281080 365580 497700 548700 442490 445040 389190 571770 457900 452900 541520 537750 350740 483760 334460 812660 312210 305550 267400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 462650000 14466 3883 13688 27678;27679 22223;22224 22224 2 9606 Homo sapiens 0.07398811463758648 KGVLFGVPGAFTPGCSK Unmodified 1720.8971 0.89706184 3528 V9HW35;P30044-2;P30044;P30044-3 HEL-S-55;PRDX5 Peroxiredoxin-5, mitochondrial yes no 0 0 1 6 0 1 58.389 58.458 4 3.8995E-06 17485 20230619_1886_Aki_TMTPro18x_K_F6 105.31 98.733 62935 54854 49939 53343 41900 41809 69999 60394 51128 56907 53282 44026 52570 36729 56686 62136 45351 45234 58119 50208 51722 53908 44842 43628 68345 60350 53256 57258 54508 45094 53800 39493 56978 61070 43500 43143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73672000 14467 3528 13689 27680 22225 22225 1 9606 Homo sapiens 0.0654491900540961 KGVNLPGAAVDLPAVSEK Unmodified 1763.9781 0.97814893 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;Q504U3;A0A024R609;H3BQ34;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 1 1 0 2 69.06 69.06 3;4 2.2246E-09 16515 20230619_1880_Aki_TMTPro18x_K_F1 129.62 111.25 70427 54469 57316 65632 65149 80373 77564 60869 76809 83648 59755 64554 82580 58406 68901 76106 62591 58289 64999 49973 59503 65535 67464 79696 77400 64177 77727 82752 63155 66138 82820 61432 69992 75188 59918 55567 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3286799999.9999995 14468 370;3451 13690 27681;27682 22226;22227 22226 2 9606 Homo sapiens 0.12671898249186597 KGVTECYECHPKPTQR Unmodified 1988.9197 0.91966455 1535 B3KMZ6;B2RDF5;A0A3R5W301;Q9UBT2;Q9UBT2-2;K7EPL2;B7Z5X0 UBA2 SUMO-activating enzyme subunit 2 yes no 0 0 2 8 0 1 34.78 34.772 5 2.7989E-15 7392 20230619_1888_Aki_TMTPro18x_K_F8 192.85 177.76 65398 53671 62287 67272 62644 68106 75979 69370 64985 83949 86165 76864 82690 73165 76949 81315 76976 64845 60449 49249 63575 66835 65351 68842 75507 71189 67742 83804 87205 78245 84230 75991 78371 80671 73566 61809 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99878000 14469 1535 13691 27683 22228 22228 1 9606 Homo sapiens -0.03523849659291045 KGVTSILPVLR Unmodified 1181.7496 0.74959297 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 1 7 0 1 54.149 54.215 3 0.0023491 15419 20230619_1887_Aki_TMTPro18x_K_F7 82.543 73.436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14470 2863 13692 27684 22229 22229 1 9606 Homo sapiens 0.16598815253587418 KGWALLHPGR Unmodified 1133.6458 0.6457966 3283 O60568;B3KQQ3;Q9UG85;H7C2S8 PLOD3;DKFZp564O1822 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes no 0 0 1 7 0 1 43.552 43.631 4 0.015246 10760 20230619_1887_Aki_TMTPro18x_K_F7 56.548 11.411 35405 32410 28389 30377 31722 47161 38069 35465 41775 28784 31127 27081 34403 25660 31929 34319 36943 33273 32709 29652 29504 31076 32972 46131 38110 36856 41880 29435 32559 27559 34877 26993 32799 34281 35272 31627 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7178200 14471 3283 13693 27685 22230 22230 1 9606 Homo sapiens 0.08431952936621201 KGYNVNDEK Unmodified 1065.5091 0.50908792 3759 P80723;P80723-2;U3KQP0 BASP1 Brain acid soluble protein 1 yes no 0 0 1 6 0 1 37.568 37.644 3 0.0033521 8587 20230619_1886_Aki_TMTPro18x_K_F6 81.335 26.685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14472 3759 13694 27686 22231 22231 1 9606 Homo sapiens -0.021046258044407296 KHAEAPAGENPPRGPGDAR Unmodified 1925.9456 0.94562002 2333 B4DYK9;B7ZMH1;B2RWN6;F5H1N7;B7ZVZ4;A0A2R8Y6P1;Q6ZU35;A0A024RD92 KIAA1211;hCG_39854 Uncharacterized protein KIAA1211 yes no 0 0 2 5 0 1 29.421 29.495 5 8.405E-05 5521 20230619_1885_Aki_TMTPro18x_K_F5 90.422 82.333 8073.6 4649.9 7507.3 8179.9 11511 8777.5 7307.9 8283.8 7869.2 6995.6 10051 8643.2 7200.9 6902.1 8871.4 5892.6 7823.1 6223.2 7447.3 4291.1 7729.9 7972.5 11498 8824.4 7636.8 8462.1 8068.6 7188.7 10078 8643.4 7520.8 7118.8 8916.7 5968.6 7484.2 5913.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6755100 14473 2333 13695 27687 22232 22232 1 9606 Homo sapiens 0.019685038988654924 KHEAFETDFTVHK Unmodified 1587.7682 0.76815616 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 6.5 0.5 1 1 42.744 42.828 4 6.4505E-07 10411 20230619_1887_Aki_TMTPro18x_K_F7 144.18 125.35 70363 17617 46050 68118 66374 42207 63022 70724 84728 83664 90071 77185 91012 74152 55650 102800 59631 102740 64595 16647 49198 64198 67099 45286 64409 70622 85311 83642 92046 78642 91137 78135 57717 102690 57314 97430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65512000 14474 1022;3868 13696 27688;27689 22233 22233 1 9606 Homo sapiens -0.002217196331912419 KHEAIETDIAAYEER Unmodified 1773.8533 0.85334235 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 1 3 0.816 1 1 1 43.854 43.92 4 1.6854E-10 11670 20230619_1881_Aki_TMTPro18x_K_F2 154.82 139.67 146050 81206 120110 134790 149440 145960 165380 152930 215970 141850 158040 148100 164310 130620 142090 158410 221180 163090 134580 74895 124700 131800 153320 146870 167260 155490 214580 144290 165050 149560 166510 136830 149300 158950 210460 155070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 530340000 14475 2337;3778;3779 13697 27690;27691;27692 22234;22235;22236 22234 3 9606 Homo sapiens -0.002630189579576836 KHEDSAIPR Unmodified 1051.5411 0.54105675 2446 Q99459;B3KY60;B4DSH1 CDC5L Cell division cycle 5-like protein yes no 0 0 1 5 0 1 29.511 29.586 3 0.086019 5543 20230619_1885_Aki_TMTPro18x_K_F5 44.309 26.042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14476 2446 13698 27693 22237 22237 1 9606 Homo sapiens 0.0173478666936262 KHEEFIATIR Unmodified 1242.6721 0.67207093 2270 B2R9B8;H0YAP0;Q96GY0;A0A994J504;A0A994J7X1 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes no 0 0 1 8 0 1 39.581 39.571 4 5.412E-06 9302 20230619_1888_Aki_TMTPro18x_K_F8 145.91 108.49 148890 47430 110990 112380 104700 99852 120360 118940 148730 130010 150120 157410 136510 130910 106160 149000 136000 161560 136860 44174 115780 107920 109690 102280 121340 120530 149870 131640 153360 157650 138430 136800 110390 150020 130010 153220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144080000 14477 2270 13699 27694 22238 22238 1 9606 Homo sapiens 0.0604417731740341 KHEETECPLR Unmodified 1297.6085 0.60848439 681 A0A024RBK4;O14545;F8VNX8;F8VVF3;O14545-2;S4R2Z9 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes no 0 0 1 3.5 0.5 1 1 30.268 30.348 4 1.5686E-05 5771 20230619_1882_Aki_TMTPro18x_K_F3 149.96 135.17 47376 22334 39019 47630 56743 60223 55341 55284 76867 53962 55994 61915 56288 49734 47810 55550 57006 56115 43627 20698 40653 46125 57539 59783 56506 56778 76193 54898 58470 62056 57066 51996 49315 55746 54447 53295 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39397000 14478 681 13700 27695;27696 22239;22240 22240 2 9606 Homo sapiens -0.02841551181995783 KHELLNSTR Unmodified 1096.5989 0.59890598 2144;1327 A0A1W6S962;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;A0A494C0Q7 GTF2I General transcription factor II-I no no 0 0 1 1.5 0.5 1 1 32.687 32.718 4 1.395E-05 6771 20230619_1881_Aki_TMTPro18x_K_F2 150.1 126.73 203360 68882 168390 199650 229430 214180 219890 220150 272860 174200 197730 190290 183490 167010 165830 196990 222840 196730 187080 64390 175030 190780 233080 215440 223800 223290 271660 179180 205710 191780 187070 174570 172250 197380 212480 186960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 195740000 14479 1327;2144 13701 27697;27698 22241;22242 22242 2 9606 Homo sapiens 0.05447048594805892 KHGGPKDEER Unmodified 1151.5683 0.56833414 3372 V9HWC9;P00441;H7BYH4 HEL-S-44;SOD1 Superoxide dismutase [Cu-Zn] yes no 0 0 2 5 0 1 23.215 23.283 5 0.0030631 3894 20230619_1885_Aki_TMTPro18x_K_F5 89.403 69.1 10001 3364.7 14654 18317 57604 36698 28917 35492 20228 10717 27711 34140 12294 19050 26847 4443.2 21385 18778 9249 3209.4 15135 17469 55413 35711 30554 35650 21369 12856 27478 33049 13775 19333 26616 5584.6 20495 17693 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49712000 14480 3372 13702 27699 22243 22243 1 9606 Homo sapiens -0.001387297902510909 KHGVYNPNK Unmodified 1055.5512 0.55122751 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 1 3 0 1 32.783 32.854 4 0.00083399 6727 20230619_1882_Aki_TMTPro18x_K_F3 109.21 79.867 26488 12498 37340 38063 56122 103050 41976 51224 96857 16679 22517 21343 14456 15294 30330 11927 24836 11495 24511 11667 37367 37073 56851 97891 44784 54918 92324 19071 26245 21270 15821 15777 30151 12083 23723 10971 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62409000 14481 297 13703 27700 22244 22244 1 9606 Homo sapiens 0.025673943945776045 KHLEINPDHPIVETLR Unmodified 1910.0374 0.037395144 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 1 6.8 0.748 2 2 1 44.194 44.268 4;5 3.1890999999999998E-19 10974 20230619_1887_Aki_TMTPro18x_K_F7 204.42 182.87 447760 111000 387980 462780 520490 249820 497540 445710 302470 501180 527030 189860 211230 119330 433190 109020 97088 56185 411770 105150 401140 435080 526520 273490 497090 443480 328710 493240 514450 204930 235100 125390 416290 107900 95859 54075 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2838200000 14482 751 13704 27701;27702;27703;27704;27705 22245;22246 22245 2 9606 Homo sapiens 0.1187779426331872 KHLEINPDHSIIETLR Unmodified 1914.0323 0.032309766 3177 K9JA46;P07900;P07900-2;Q8TBA7;O75322;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 1 7.5 0.5 1 1 46.658 46.727 5 3.9341E-26 12149 20230619_1888_Aki_TMTPro18x_K_F8 234.77 218.46 95669 27041 76657 95165 117570 53297 123230 106340 65317 115520 114190 61184 57843 38884 94682 25318 27195 18469 87955 25448 80107 89861 118300 58366 122110 105260 71940 114390 112120 63817 62366 40220 91527 25531 26612 17646 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4026399999.9999995 14483 3177 13705 27706;27707 22247 22247 1 9606 Homo sapiens 0.11185490400725939 KHNFTPLAR Unmodified 1082.5985 0.59851205 2292 B2RB23;P42765;A0A0B4J2A4;B3KNP8;K7EME0 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes no 0 0 1 5 0.816 1 1 1 34.85 34.914 4 0.0067135 7483 20230619_1885_Aki_TMTPro18x_K_F5 72.643 35.452 62003 28763 55928 62865 96702 93558 91182 88611 107160 26865 27254 19610 22561 17150 53419 21691 24185 16403 57131 26670 57977 61012 96992 92104 92635 89193 104830 30386 31538 20232 24641 18020 51985 21535 23368 15664 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88659000 14484 2292 13706 27708;27709;27710 22248 22248 1 9606 Homo sapiens 0.06051673665592716 KHNMCGETEEEK Oxidation (M) 1506.6079 0.60789204 3483 Q6FGJ9;P21266;Q59EJ5;A4UJ43 GSTM3 Glutathione S-transferase Mu 3 yes no 0 1 1 3 0.816 1 1 1 29.027 29.108 4 2.054E-09 5272 20230619_1882_Aki_TMTPro18x_K_F3 173.76 146.26 31668 5842.5 42269 43441 74632 46893 56635 70955 44642 37506 63420 52311 46707 38513 63674 12985 28746 26041 29222 5666.9 42511 40773 74122 47703 57824 69876 46859 40090 63420 51965 48927 38843 62239 14378 27823 24605 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 46257000 14485 3483 13707 27711;27712;27713 22249;22250 22250 2135 2 9606 Homo sapiens -0.12514758683983018 KHNMCGETEEEK Unmodified 1490.613 0.61297742 3483 Q6FGJ9;P21266;Q59EJ5;A4UJ43 GSTM3 Glutathione S-transferase Mu 3 yes no 0 0 1 3 0.816 1 1 1 32.35 32.416 4 2.0843E-10 6532 20230619_1882_Aki_TMTPro18x_K_F3 191.26 135.41 78553 24353 106160 104450 143200 120460 120520 137440 115150 99785 148350 133920 134080 101800 144710 47428 105920 96741 72566 23036 106050 98976 144780 120890 122760 138170 118850 103850 149960 133240 137610 103300 144270 51650 101650 91396 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 109090000 14486 3483 13707 27714;27715;27716 22251;22252;22253 22252 3 9606 Homo sapiens -0.1127045482135145 KHPDADSLYVEEVDVGEIAPR Unmodified 2338.1441 0.14410464 1746 A0A8C8MUD1;Q12904;Q12904-2;A0A8C8KIA0;A0A804HJ47;A0A5F9ZHC5 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 0 1 3 0.816 1 1 1 52.124 52.167 4 1.027E-22 14990 20230619_1883_Aki_TMTPro18x_K_F4 183.54 170.5 109510 89135 111060 119070 107940 118240 137620 111920 127480 134440 142180 157530 149130 129960 163520 159520 147770 162910 101270 81849 112710 117760 113080 119480 136690 115490 131060 135340 145670 157910 152660 136500 165140 160030 141650 154640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 571260000 14487 1746 13708 27717;27718;27719 22254;22255 22255 2 9606 Homo sapiens 0.02855835176569599 KHPDASVNFSEFSK Unmodified 1591.7631 0.76307078 772 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;A0A286R9D9;Q75MM1;Q9NYD7 HMGB1;WUGSC:H_NH0244E06.1;HMG1 High mobility group protein B1 yes no 0 0 1 7 0 1 46.215 46.303 3 0.052603 11867 20230619_1887_Aki_TMTPro18x_K_F7 44.44 26.119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14488 772 13709 27720 22256 22256 1 9606 Homo sapiens -0.009140234957840221 KHPDSSVNFAEFSK Unmodified 1591.7631 0.76307078 4068;3509 Q5U071;D6R9A6;P26583 HMGB2 High mobility group protein B2 no no 0 0 1 8 0 1 45.973 46.011 4 2.0623E-08 11833 20230619_1888_Aki_TMTPro18x_K_F8 146.77 63.137 107380 77020 102580 97646 86422 89876 92771 94405 97155 107120 106990 104540 138630 100270 99478 119120 117910 124610 99175 70721 104300 96850 91179 91601 93387 96488 99218 107470 110650 106130 138500 104670 102970 119650 112690 118270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4880500000 14489 4068;3509 13710 27721 22257 22257 1 9606 Homo sapiens -0.009140234957840221 KHQVSVEGTNQTDVK Unmodified 1668.8431 0.84311201 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;A0A1U9XBD9;A0A1U9XBC3;Q14676-3;B4DYH4;Q14676-4 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 1 6.5 0.5 1 1 35.434 35.496 4 9.2475E-14 7788 20230619_1886_Aki_TMTPro18x_K_F6 171.76 151.53 27014 10096 24827 29587 32452 25206 28600 30075 35384 26168 33894 30255 32489 24773 29715 22145 29584 20488 24878 9432.5 25530 28182 32933 25922 29273 30291 35569 26788 34756 30347 33046 25602 30211 22238 28244 19511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93010000 14490 1308 13711 27722;27723 22258 22258 1 9606 Homo sapiens 0.03544418107412639 KHSQFIGYPITLYLEK Unmodified 1936.0458 0.045834566 751 A0A024RD80;P08238;B4DGL0;Q6PK50;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 1 4.5 0.5 1 1 59.206 59.234 4 6.6196E-08 17486 20230619_1885_Aki_TMTPro18x_K_F5 124.43 106.95 80295 53871 87482 86061 74439 54660 83819 71370 59185 61115 60145 32678 40633 27948 71803 25146 27351 28715 74218 49613 88023 83853 78286 58087 83245 71565 61737 61405 60705 34344 43463 28907 69757 25671 26609 27231 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 376330000 14491 751 13712 27724;27725 22259 22259 1 9606 Homo sapiens 0.11525348179975481 KHVLFGTVGVPEHTYR Unmodified 1838.9792 0.97915198 2185 Q59GA0;E9PIM6;B0YJA4;E9PNQ8;P04216;J3QRJ3 THY1 Thy-1 membrane glycoprotein yes no 0 0 1 4 0 1 42.928 42.972 5 6.3606E-15 10806 20230619_1883_Aki_TMTPro18x_K_F4 186.43 173.6 107360 27511 110440 119700 88774 68919 128820 121960 124350 151650 161530 112170 122600 77705 114160 80568 66048 48789 98870 26089 111640 112510 94702 74661 127460 121760 128440 150310 161920 114500 125650 81547 113400 79296 63540 46740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 445780000 14492 2185 13713 27726 22260 22260 1 9606 Homo sapiens 0.09322157408746534 KHYASEEIK Unmodified 1103.5611 0.56112349 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 1 6.5 0.5 1 1 35.673 35.739 4 1.3721E-05 7891 20230619_1886_Aki_TMTPro18x_K_F6 150.61 59.024 103500 40465 94671 104010 131920 85486 138100 134240 93834 103970 123060 79757 64099 52281 121460 34427 50288 29930 95320 37682 97470 99506 133640 88996 137520 132960 99248 105810 122130 81165 69880 53915 118090 34948 48662 28550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196670000 14493 2337;3778;3779 13714 27727;27728 22261 22261 1 9606 Homo sapiens 0.013485376093285595 KIADEDALRR Unmodified 1185.6466 0.64658446 1116 O75150;O75150-4;A0A0S2Z537;A8K6K1;H3BP71;A0A0S2Z4Z2;B4DMM1;Q6ZN99;O75150-3;B4DFU2;B4DEN2 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 0 0 2 6 0 1 36.139 36.199 4 0.00064836 8039 20230619_1886_Aki_TMTPro18x_K_F6 94.465 54.802 50863 44954 59931 62169 69716 70099 67693 68161 64726 61503 79412 62379 64256 47441 67351 48002 64235 39216 47124 41282 60280 61462 71483 70240 68307 69588 66656 62525 80018 62817 66135 49474 68143 47820 61316 37433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26640000 14494 1116 13715 27729 22262 22262 1 9606 Homo sapiens 0.06118702794969977 KIAELMPGASGAEVK Unmodified 1499.8018 0.80176447 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8 PSMC5 26S protease regulatory subunit 8 yes no 0 0 1 1 0 1 53.053 53.053 3 0.070675 15604 20230619_1880_Aki_TMTPro18x_K_F1 38.093 23.062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14495 1202 13716 27730 22263 22263 1 9606 Homo sapiens 0.07185565814393158 KICAVGITK Unmodified 988.57394 0.57393679 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DS32 CSE1L Exportin-2 yes no 0 0 1 4 0 1 45.637 45.681 3 0.0010363 12014 20230619_1883_Aki_TMTPro18x_K_F4 93.258 39.931 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14496 1462 13717 27731 22264 22264 1 9606 Homo sapiens 0.07919277467874508 KICSHSAPEQQAR Unmodified 1510.7311 0.73105914 2364 B3KNS8;O75683 SURF6 Surfeit locus protein 6 yes no 0 0 1 8 0 1 28.92 28.944 4 1.633E-15 5275 20230619_1888_Aki_TMTPro18x_K_F8 203.29 173.6 17042 11450 23456 19999 33146 26322 27697 25103 19716 24794 21108 15361 16747 8796.6 17110 5641.3 12003 5540.3 15790 10558 23408 19572 33391 26123 27998 25714 20635 24765 21369 15777 17197 9158.4 17044 5757.5 11489 5287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24710000 14497 2364 13718 27732 22265 22265 1 9606 Homo sapiens -0.0038771445056227094 KIDDPIDEEEEFEELK Unmodified 1976.9102 0.9102481 1847 A0A8V8TPV5;A0A8V8TQZ3;Q8WWQ0;A0A8V8TQM4;A0A8V8TPK0;Q9NWP3 PHIP PH-interacting protein yes no 0 0 1 2 0 1 60.31 60.322 3 0.088142 18746 20230619_1881_Aki_TMTPro18x_K_F2 31.876 17.106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14498 1847 13719 27733 22266 22266 1 9606 Homo sapiens -0.03913060982768002 KIDGAEPLTPEETEEK Unmodified 1784.868 0.86798936 940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 SMARCA1 Probable global transcription activator SNF2L1 yes no 0 0 1 2 0 1 46.893 46.969 3 0.00010156 13039 20230619_1881_Aki_TMTPro18x_K_F2 95.662 73.464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14499 940 13720 27734 22267 22267 1 9606 Homo sapiens 0.006950083994752276 KIDGDTIIFSNVQER Unmodified 1733.8948 0.89481323 1294 B7Z670;A0A1S5UZH4;Q14CA1;C9JYY6;Q92823-3;Q92823-4;Q92823-6;Q92823-2;Q92823;Q92823-5;C9JH43;Q4KMQ7 NRCAM Neuronal cell adhesion molecule yes no 0 0 1 6.5 0.5 1 1 52.612 52.686 3 0.0003027 15077 20230619_1886_Aki_TMTPro18x_K_F6 91.518 71.412 48579 43755 45735 38855 33522 34896 48302 51309 54179 58713 49885 51742 64777 46399 57984 70242 57081 62566 44926 40017 46470 39672 36173 36008 48047 51457 54738 58698 52057 52682 65257 49337 59102 69732 54661 59487 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105870000 14500 1294 13721 27735;27736 22268 22268 1 9606 Homo sapiens 0.057221618013272746 KIDILLK Unmodified 841.56369 0.56368968 2260 C1IDX9;B2R8C8;O94817 ATG12 Ubiquitin-like protein ATG12 yes no 0 0 1 3 0 1 54.481 54.528 3 0.0092709 16164 20230619_1882_Aki_TMTPro18x_K_F3 83.005 0.46188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14501 2260 13722 27737 22269 22269 1 9606 Homo sapiens 0.1365703780493277 KIDLSHVTSK Unmodified 1126.6346 0.63462279 275;1599 A0A024R3Z1;A0A024R3Y8;P11137-4;Q16296;A0A669KB77;P11137-3;P11137;A8K5Y1;A0A024R409;Q59FX9;P11137-2 MAP2;4R-MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 1 2.5 0.5 1 1 44.531 44.609 4 0.02463 11662 20230619_1882_Aki_TMTPro18x_K_F3 63.537 39.686 161800 127160 137700 144070 117820 147830 163740 154730 165630 180530 187220 199620 181060 159220 165880 190320 202670 200300 149390 116590 141660 144220 125350 149350 162510 158320 169520 181580 190890 200350 184320 167200 171110 191250 193540 190140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 192500000 14502 275;1599 13723 27738;27739 22270;22271 22271 2 9606 Homo sapiens 0.0763708605179545 KIDQDVVITNSYETAMR Unmodified 1981.9779 0.97789093 1568 A0A590UJS4;Q6IEH8;Q6KC79-2;Q6KC79 NIPBL Nipped-B-like protein yes no 0 0 1 6.5 0.5 1 1 52.193 52.269 3 0.0239 14617 20230619_1887_Aki_TMTPro18x_K_F7 50.957 31.634 91136 76984 92167 100310 89508 100030 102220 95745 108160 127160 112390 116710 126920 109280 118720 132960 120390 131950 84296 70662 93554 99369 93519 101070 102530 98974 110160 126490 115800 118670 128690 114240 121050 133130 115250 125300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35368000 14503 1568 13724 27740;27741 22272;22273 22273 2 9606 Homo sapiens 0.02618110467005863 KIDQEGKIPDETLEK Unmodified 1741.9098 0.90979459 4531 Q9H845;A0A7P0T8U3;A0A7P0T871;A0A7P0T7Z1;A0A7P0TB58;A0A7P0T9N9;Q59FN3;A0A7P0TB68;A0A7P0Z450;B4DGH4;D6RCD8 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 2 5.5 0.5 1 1 46.998 47.078 4 0.0083537 12515 20230619_1885_Aki_TMTPro18x_K_F5 69.431 51.067 62758 76110 82987 69596 96775 79092 90401 83960 62939 80671 97671 50364 65217 40409 124880 45615 43525 34370 58360 69562 82714 71051 98895 79506 90723 85335 67099 80711 96965 52286 70196 42370 121010 45395 42368 32798 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47344000 14504 4531 13725 27742;27743 22274 22274 1 9606 Homo sapiens 0.06851608878673687 KIDYFER Unmodified 969.49198 0.4919813 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 7 0 1 44.682 44.768 3 0.025489 11204 20230619_1887_Aki_TMTPro18x_K_F7 73.665 32.476 259500 215520 231990 261560 263390 299460 289880 294830 327500 322540 302900 289210 349280 277610 281890 378120 319410 303950 239760 197690 238640 260860 271970 299820 291890 302190 330680 323490 313820 294910 351710 292070 290440 373940 305140 289530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1023699999.9999999 14505 3152 13726 27744 22275 22275 1 9606 Homo sapiens 0.006014983804220719 KIEDCIR Unmodified 932.47495 0.47495102 2011 G3V167;A8K214;Q9UGN5-2;Q9UGN5;B4DV82 PARP2 Poly [ADP-ribose] polymerase 2 yes no 0 0 1 5.5 0.5 1 1 38.27 38.357 3 0.053172 8856 20230619_1886_Aki_TMTPro18x_K_F6 58.23 28.42 68948 50987 61472 70302 72314 77082 70850 76427 92963 62440 67633 60210 70444 62902 61901 76924 94021 58294 63659 46853 63278 69478 74251 77402 72200 77735 92354 63855 70647 61397 71477 65495 64935 76002 89400 55697 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45581000 14506 2011 13727 27745;27746 22276 22276 1 9606 Homo sapiens 0.006012545029761895 KIEECVK Unmodified 904.4688 0.46880301 4047 Q5QPA5;Q9NVS2-3;Q9NVS2;Q9NVS2-2 MRPS18A 28S ribosomal protein S18a, mitochondrial yes no 0 0 1 6 0 1 40.08 40.172 3 0.076706 9625 20230619_1886_Aki_TMTPro18x_K_F6 57.708 4.8414 37305 33166 51999 55324 72444 74106 61610 70826 60900 45786 63969 62512 53185 43619 66369 40935 59813 49959 34626 30527 51924 54259 73236 73403 62758 71880 62141 48119 65040 62067 55224 45481 66748 41777 57224 47391 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23105000 14507 4047 13728 27747 22277 22277 1 9606 Homo sapiens 0.012747362714549126 KIEEGIEFVK Unmodified 1190.6547 0.65468953 1443 F5H7P7;B4DT22;A0A384MTS1;Q96BP3;D6R9Q1;D6RD43 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes no 0 0 1 6 0 1 53.375 53.452 3 0.003675 15415 20230619_1886_Aki_TMTPro18x_K_F6 75.89 38.908 134480 124970 145510 148890 140690 176570 160340 161390 181010 171580 178700 185060 169320 137800 147990 219820 176490 203910 124540 114570 146880 148780 147200 176050 161200 166180 183120 173260 183060 185740 172090 148030 152850 218450 168770 193750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86438000 14508 1443 13729 27748 22278 22278 1 9606 Homo sapiens 0.06698836991745338 KIEEVVER Unmodified 1000.5553 0.55530983 1437 A0A384MTJ7;P30837;B4DLJ0 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes no 0 0 1 3.5 0.5 1 1 41.652 41.704 3 0.021061 10275 20230619_1883_Aki_TMTPro18x_K_F4 69.01 20.37 169030 129060 147600 171950 196280 191680 187630 183850 244350 206430 236780 241700 230690 217770 195700 255540 308780 266370 156070 118530 152570 170330 199740 192200 191380 188990 245300 208600 243000 243020 234270 227320 206170 256620 294060 253040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174580000 14509 1437 13730 27749;27750 22279 22279 1 9606 Homo sapiens 0.05505439097669296 KIEFPMPNEEAR Unmodified 1459.7129 0.71294946 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PM69 PSMC3 26S protease regulatory subunit 6A yes no 0 0 1 6 0 1 50.468 50.545 3 1.6648E-05 14087 20230619_1886_Aki_TMTPro18x_K_F6 130.47 95.264 179920 146480 170460 181810 155100 208280 193950 194140 218690 238140 201870 224270 253620 191420 206880 254320 227880 238920 166290 134400 173840 181050 163690 208190 194090 200460 220940 237860 210320 227100 254840 201980 212620 253550 217910 227050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101090000 14510 4761 13731 27751 22280 22280 1 9606 Homo sapiens 0.0014815057470514148 KIEFQPPEAK Unmodified 1185.6394 0.63937381 4481 Q9C0C9;K7ES11 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 0 0 1 8 0 1 48.281 48.348 3 0.00097086 12752 20230619_1888_Aki_TMTPro18x_K_F8 95.018 74.178 105190 83839 103230 100280 89445 113560 111780 99380 115160 139360 137760 135050 148250 128560 140510 158520 144820 158290 97236 76904 104820 100110 94700 113480 111530 103600 118140 138550 140740 137100 150610 134410 143360 158760 138620 150300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95844000 14511 4481 13732 27752 22281 22281 1 9606 Homo sapiens 0.05397970194553636 KIEHDVVMK Unmodified 1097.5903 0.59031513 4694 Q9UNZ5;K7ESE5;A0A0A0MQS3 C19orf53 Leydig cell tumor 10 kDa protein homolog yes no 0 0 1 7 0 1 40.379 40.447 3 0.0035157 9431 20230619_1887_Aki_TMTPro18x_K_F7 81.017 57.697 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14512 4694 13733 27753 22282 22282 1 9606 Homo sapiens 0.045423586339666144 KIENLCAMGFDR Unmodified 1452.6854 0.6853545 3688 P61086;B4DIZ2;D6RDM7;P61086-2;B3KSH4 UBE2K;HIP2 Ubiquitin-conjugating enzyme E2 K yes no 0 0 1 1 0 1 51.568 51.568 3 2.4959E-05 15015 20230619_1880_Aki_TMTPro18x_K_F1 122.52 109.38 386010 338990 363470 392220 292910 395840 364870 377360 399080 461380 414060 408750 458100 386590 454330 523600 459430 451910 356930 310740 370280 391850 312400 399490 364990 389020 405640 460090 426120 416720 465950 406720 462730 519760 439470 430020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274870000 14513 3688 13734 27754 22283 22283 1 9606 Homo sapiens -0.02288075957176261 KIEQQGGFTFENK Unmodified 1524.7573 0.75725712 3244 O15397-2;O15397 IPO8 Importin-8 yes no 0 0 1 8 0 1 48.521 48.587 3 2.2557E-06 12923 20230619_1888_Aki_TMTPro18x_K_F8 138.28 109.98 97522 71747 92546 97489 86261 108070 96835 98732 122640 119980 114630 123830 137360 113740 88073 157480 138340 143100 90081 65921 94372 96455 90536 108220 97845 102080 123200 120260 118970 125230 137160 119970 93587 156520 131910 136050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38943000 14514 3244 13735 27755 22284 22284 1 9606 Homo sapiens 0.015868779925540366 KIEVNNATAR Unmodified 1114.6095 0.60947067 894 O43251-4;O43251-10;O43251-5;Q9NWB1-3;F8VZG9;A0A8Q3WKT3;Q9NWB1-2;F8WSN4;J3KNW3;B0QYY4;B7ZLH9;B7Z1U7;I3L1D4;A0A6Q8PH77;A0A087X2B1;A0A804HJM2;A0A994J531;A0A0G2JRA5;X5DNY3;A0A8Q3SI58;X5D7T5;X5DP44;O43251-2;A0A6Q8PFM4;O43251-7;Q8TCM0;S4R469;A0A804HKG7;A0A6Q8PHA3;A0A6Q8PGE0;B0QYV1;F8VZY7;A0A286YEU2;F8VR27;O43251-6;O43251-8;Q59HD3;O43251-9;Q9NWB1;Q9NWB1-5;Q9NWB1-4;O43251;A0A8Q3SI75;J3QRF4;S4R3K7;A0A8I5KWJ3;F8VRS4;A0A0G2JRD1;O43251-3;A6NFN3-2;A6NFN3;A0A3B3ITL7 RBFOX2;RBFOX1;A2BP1;DKFZp547L059;RBFOX3 RNA binding protein fox-1 homolog 2;RNA binding protein fox-1 homolog 1;RNA binding protein fox-1 homolog;RNA binding protein fox-1 homolog 3 yes no 0 0 1 8 0 1 35.841 35.83 3 0.00066859 7804 20230619_1888_Aki_TMTPro18x_K_F8 97.911 80.047 128150 79363 152240 143850 216090 209830 211160 207230 172780 120880 168350 119740 141900 102120 199770 51080 121940 98652 118510 73244 153560 140770 218820 207030 211980 209510 177800 126790 171620 121100 148170 103400 196980 55327 117260 93281 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134800000 14515 894 13736 27756 22285 22285 1 9606 Homo sapiens 0.05675031249211315 KIFDIDEAEEGVK Unmodified 1491.7457 0.74568938 2657 Q6IBR8;B5BU01;P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 1 5 0 1 55.282 55.347 3 4.9486E-06 15993 20230619_1885_Aki_TMTPro18x_K_F5 129.01 101.6 99804 80822 96142 107270 98256 126510 107200 106300 107040 131230 126350 121850 127920 107600 132010 126550 117400 118580 92252 74212 98091 106360 102260 125940 107600 110650 109950 130970 128800 123630 130650 112470 133330 126450 112480 112700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41265000 14516 2657 13737 27757 22286 22286 1 9606 Homo sapiens 0.0194863617853116 KIFVGGLNPEATEEK Unmodified 1630.8566 0.85663681 4406 Q99729-3;D6R9P3;D6RD18;B4DMY3;D6RBZ0;Q53F64;Q99729-2 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 1 6.5 0.5 1 1 52.792 52.866 3 0.00030648 14921 20230619_1887_Aki_TMTPro18x_K_F7 91.441 81.102 67152 61837 83139 68893 81573 69929 98256 66514 48946 80896 72774 40821 39543 32250 121880 42585 39432 38261 62265 56655 83008 69068 84951 70643 96560 68648 53723 79685 72067 43005 45212 34139 117500 42643 38517 36391 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147670000 14517 4406 13738 27758;27759 22287;22288 22288 2 9606 Homo sapiens 0.06644275886674222 KIFVGGLSPDTPEEK Unmodified 1615.8457 0.84573777 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;D6RAF8;B4E0W4;D6RF44 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 1 7 0 1 52.854 52.924 3 5.1279E-08 14868 20230619_1887_Aki_TMTPro18x_K_F7 138.91 113.47 263270 378580 484950 348770 575590 373790 562130 402270 138290 320370 383520 111410 91193 54500 848580 42801 45050 49973 246280 345890 474510 355670 586480 377770 554590 407130 175160 321120 368990 121220 137140 57822 800800 46205 50905 47370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99098000 14518 759 13739 27760 22289;22290 22289 2 9606 Homo sapiens 0.06244873512378035 KIGDEYFTFITDCKDPK Unmodified 2075.9874 0.98739299 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 2 8 0 1 58.73 58.772 4 8.1895E-05 17269 20230619_1888_Aki_TMTPro18x_K_F8 94.384 72.581 167690 181730 219160 198520 210170 186080 236490 192120 111300 211010 204640 94477 98408 55618 287510 37672 37479 21293 155770 166380 218060 199100 218850 189470 233160 196460 124520 208380 200600 99912 112220 57927 273850 38079 38165 20457 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 526710000 14519 2435 13740 27761 22291 22291 1 9606 Homo sapiens -0.0075612124751387455 KIGQQPQQPGAPPQQDYTK Unmodified 2108.0651 0.065066458 3197 M0R0C6;Q92945;A0A384P5V3;M0QYG1 KHSRP Far upstream element-binding protein 2 yes no 0 0 1 4.5 3.5 1 1 42.444 42.446 4 4.3734E-07 10472 20230619_1888_Aki_TMTPro18x_K_F8 104.88 95.351 74639 58658 69195 75215 85857 93058 80001 83952 99449 96641 99130 97293 99488 80041 93366 97427 98488 85284 68958 53846 71026 74818 87735 92537 81615 86706 100220 97016 101720 98150 101200 84053 95348 96951 94092 81180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 160770000 14520 3197 13741 27762;27763 22292;22293 22293 2 9606 Homo sapiens 0.055356527329422534 KIHPQTIIAGWR Unmodified 1418.8147 0.81465284 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 1 6.5 0.5 1 1 46.733 46.818 4 1.6473E-07 12063 20230619_1887_Aki_TMTPro18x_K_F7 165.58 140.75 274140 245880 282310 257280 231760 264970 275050 265560 244980 221120 213620 127510 139900 102840 251550 106200 116380 45846 253700 225170 285180 259220 245810 267460 274020 270080 249920 222970 217090 132990 150150 107130 245550 103830 112170 44443 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 376140000 14521 3756 13742 27764;27765 22294 22294 1 9606 Homo sapiens 0.12199809779463067 KIHSQEEALR Unmodified 1209.6466 0.64658446 2956 F2Z2Y4;V9HWC3;O00764-3;O00764-2;O00764 PDXK;HEL-S-1a Pyridoxal kinase yes no 0 0 1 5.5 0.5 1 1 31.997 32.053 4 5.7751E-07 6528 20230619_1886_Aki_TMTPro18x_K_F6 172.61 111.64 55953 45568 58888 58940 60049 44794 72238 64137 42213 57490 68389 52984 53635 44794 59389 53924 56273 40652 51759 41828 59577 58270 62335 46871 71223 64045 45777 58243 68219 53776 55453 46943 60083 53332 53763 38809 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44579000 14522 2956 13743 27766;27767 22295 22295 1 9606 Homo sapiens 0.0501470279498335 KIIEDQQESLNK Unmodified 1443.7569 0.75692277 2662 B5BUB5;P05455;Q14730;Q9UMH5 SSB Lupus La protein yes no 0 0 1 5 0.816 1 1 1 44.895 44.965 3 1.2273E-09 11688 20230619_1886_Aki_TMTPro18x_K_F6 172.92 135.96 574970 466650 540870 561480 697760 702350 686330 659860 720050 722140 795780 698830 762950 573750 706060 736200 690250 542880 531370 428050 554720 561150 711510 698770 693680 678610 734760 725710 810820 706630 776340 604580 718230 726460 659560 518220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 751010000 14523 2662 13744 27768;27769;27770 22296;22297;22298 22298 3 9606 Homo sapiens 0.05279458272707416 KIIETPGIR Unmodified 1025.6233 0.62332982 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 1 2 0 1 43.243 43.324 3 0.010024 11363 20230619_1881_Aki_TMTPro18x_K_F2 70.441 54.239 390420 338390 378730 395410 384700 412840 452290 416400 395690 443840 507340 453500 437320 344980 531840 349170 332660 273000 361050 310230 385920 394980 400620 416330 450450 426010 410810 447150 512120 456190 452480 359620 527130 347300 319800 260330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 670350000 14524 1723 13745 27771 22299 22299 1 9606 Homo sapiens 0.11154308748314179 KIIPTLEEYQHYK Unmodified 1660.8825 0.88245763 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;Q5T6W2;A0A994J6T5 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 1 1.5 0.5 1 1 52.408 52.427 4 1.4853E-06 15530 20230619_1881_Aki_TMTPro18x_K_F2 141.75 102.09 110420 91904 88076 124050 92372 103880 102450 113370 142470 149920 144860 174680 166230 148690 108890 209250 200440 183350 101940 84394 91608 122310 96023 106790 103980 116160 143060 150280 149550 175320 166420 157330 117340 207550 190770 174480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292780000 14525 1865 13746 27772;27773 22300 22300 1 9606 Homo sapiens 0.07845170128962309 KINDYVEK Unmodified 1007.5288 0.52876073 2785 CON__P34955 yes yes 0 0 1 7 0 1 44.132 44.215 3 0.030948 11027 20230619_1887_Aki_TMTPro18x_K_F7 64.73 21.186 + 73582 101100 117060 94179 290190 288940 174450 185540 268220 116860 174300 196550 107200 109150 152710 104330 147910 176330 68660 92384 117740 98230 284440 275100 185340 194640 263700 124540 180490 192850 113860 115170 153970 109110 141770 166610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132360000 14526 2785 13747 27774 22301 22301 1 0.02529750206326753 KINEELESQYQQSMDSK Oxidation (M) 2071.9368 0.93681398 2936 E9PM92;O00193;E9PRZ9 C11orf58;SMAP Small acidic protein yes no 0 1 1 5 0.816 1 1 1 48.226 48.291 3 0.023748 13018 20230619_1885_Aki_TMTPro18x_K_F5 71.697 61.948 22276 16341 18414 27675 22253 22085 25676 24029 23395 27676 27194 28389 25194 17285 24250 25230 21274 26442 20555 15055 19140 26915 22881 22794 25615 24530 24135 27772 27647 28396 25695 18637 24520 25289 20419 25083 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134710000 14527 2936 13748 27775;27776;27777 22302 22302 1746 1 9606 Homo sapiens -0.05627695363091334 KINEELESQYQQSMDSK Unmodified 2055.9419 0.94189936 2936 E9PM92;O00193;E9PRZ9 C11orf58;SMAP Small acidic protein yes no 0 0 1 5 0 1 51.843 51.917 4 2.7088E-06 14609 20230619_1885_Aki_TMTPro18x_K_F5 110.22 95.288 69529 57811 64729 71211 52983 68339 72303 67843 84980 81105 84781 80666 95867 65348 74702 104710 103840 86254 64261 53036 66032 70779 56583 69294 72175 69726 85835 81247 87429 81460 96408 70041 78100 103460 98950 82184 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 242820000 14528 2936 13748 27778 22303 22303 1 9606 Homo sapiens -0.043833915005052404 KINLELR Unmodified 884.54435 0.54435122 3989 Q53F20;Q9BTT0;E9PPH5;Q5TB19;B4E0D5;E9PLC4;Q9BTT0-2;E9PI45;Q5TB25 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes no 0 0 1 2.5 0.5 1 1 45.306 45.385 3 0.04946 12253 20230619_1881_Aki_TMTPro18x_K_F2 63.565 14.147 715010 601150 636210 683120 927990 963470 810980 825420 851940 424320 452050 303010 332740 241390 617050 317120 343940 176240 660660 551050 657450 686830 937350 949950 825430 841810 848430 447390 477040 311790 356510 255100 605670 310650 330560 169500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290210000 14529 3989 13749 27779;27780 22304;22305 22304 2 9606 Homo sapiens 0.09746081514026628 KINPENSK Unmodified 928.49779 0.49779495 4703 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 1 8 0 1 37.11 37.096 3 0.01267 8305 20230619_1888_Aki_TMTPro18x_K_F8 72.643 40.422 44053 19656 65948 65028 110850 94189 68784 95783 55895 32670 75765 76687 40749 52586 80564 22016 70427 49028 40787 18394 65795 62240 110140 93018 71506 95973 58346 37710 75351 75035 44691 53336 80327 24340 67334 46359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45017000 14530 4703 13750 27781 22306 22306 1 9606 Homo sapiens 0.03068596892092046 KINPICNDHYR Unmodified 1428.6932 0.69321707 4376 V9HWH0;Q96KB5;Q96KB5-2;E5RFX4 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase yes no 0 0 1 2 0 1 37.183 37.243 4 2.0722E-12 8607 20230619_1881_Aki_TMTPro18x_K_F2 205.56 166.77 78768 61843 73350 77818 74797 87623 65215 66660 77526 61923 53737 47071 54144 49455 59927 52321 52674 31647 72774 56760 74997 77383 77399 87368 66721 69433 77336 62443 56249 48551 55547 51051 60386 51424 50322 30355 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98660000 14531 4376 13751 27782 22307 22307 1 9606 Homo sapiens -0.003981806453793979 KIPDPDSDDVSEVDAR Unmodified 1756.8115 0.81153711 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A994J4Z2;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;Q59FZ6;A0A2R8YF80;A0A2R8YGP5;A0A2R8Y7R0;A0A2R8Y583 SMARCA4 Transcription activator BRG1 yes no 0 0 1 1 0 1 45.343 45.343 3 0.040504 12429 20230619_1880_Aki_TMTPro18x_K_F1 47.916 37.72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14532 1348 13752 27783 22308 22308 1 9606 Homo sapiens -0.03659619437189576 KIPIIIR Unmodified 851.59566 0.59565851 2208 U3KPY1;U3KQB0;B2R4H6;P61218 POLR2F DNA-directed RNA polymerases I, II, and III subunit RPABC2 yes no 0 0 1 6.5 0.5 1 1 48.616 48.698 3 0.005394 13321 20230619_1886_Aki_TMTPro18x_K_F6 94.006 80.012 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14533 2208 13753 27784;27785 22309;22310 22309 2 9606 Homo sapiens 0.16392450278749493 KIPNPDFFEDLEPFR Unmodified 1862.9203 0.9202997 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2 CANX Calnexin yes no 0 0 1 6.5 0.5 1 1 62.882 62.922 3 1.3951E-10 19120 20230619_1887_Aki_TMTPro18x_K_F7 155.06 128.65 1079800 895250 1041500 1094000 852510 985490 1104500 1016500 1220100 1171400 1202000 1246900 1283800 1106600 1313700 1344100 1160800 1354600 998220 821250 1058700 1087300 907650 1005500 1102800 1041100 1235600 1177900 1238400 1257700 1308900 1158600 1327200 1347500 1113500 1285800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4729900000 14534 1700 13754 27786;27787 22311 22311 1 9606 Homo sapiens 0.02335636323732615 KIPQQLESK Unmodified 1069.6132 0.61315906 817 Q8N5A0;A0A087WUT6;O60841 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 1 1 0 1 43.933 43.933 3 0.0033521 11824 20230619_1880_Aki_TMTPro18x_K_F1 81.335 54.737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14535 817 13755 27788 22312 22312 1 9606 Homo sapiens 0.08113701023080466 KIPVPPR Unmodified 805.51741 0.51740818 3571 P41091;Q2VIR3;Q2VIR3-2 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 1 4 0 2 39.442 39.484 3 0.038632 9229 20230619_1883_Aki_TMTPro18x_K_F4 57.559 30.034 31962 28478 31350 35449 34657 37506 39006 36420 38091 41999 43672 39241 45097 43786 32749 50814 51057 49738 29566 26122 31975 35250 35836 37750 39048 37438 39101 42067 44564 40152 45449 45368 34629 50837 48665 47257 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90737000 14536 3571 13756 27789;27790 22313;22314 22314 2 9606 Homo sapiens 0.1068701769351037 KIPVVFR Unmodified 857.54871 0.54870831 1178 X6RA14;U3KQT1;A0A140VJJ2;P10768;H7BZT7 ESD S-formylglutathione hydrolase yes no 0 0 1 6 0.816 1 1 1 47.814 47.896 3 0.013126 12976 20230619_1886_Aki_TMTPro18x_K_F6 90.706 76.712 795320 690920 732940 808050 703910 757530 778780 782200 865160 854970 892360 893800 842970 760930 966620 958040 936530 963710 735220 633430 749680 805930 735500 770670 783820 799540 877600 861250 912500 901260 868060 799530 979060 959960 896540 915170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 711690000 14537 1178 13757 27791;27792;27793 22315;22316 22315 2 9606 Homo sapiens 0.11423590727611099 KIQALQQQADEAEDR Unmodified 1741.8595 0.85949036 3746 P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1;A0A590UK79;A0A590UJB9 TPM4;HEL-S-108 Tropomyosin alpha-4 chain yes no 0 0 1 3.5 0.5 1 1 45.897 45.957 3 2.7215E-42 12108 20230619_1883_Aki_TMTPro18x_K_F4 281.65 271.46 378660 343420 406140 389610 514420 503930 648150 541640 498090 503840 468130 292520 410410 238490 522820 257200 229350 160130 350590 314710 411960 391410 528170 501970 640670 549680 514840 504600 478420 304920 424850 249350 511980 253700 221790 153370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 832720000 14538 3746 13758 27794;27795 22317;22318 22318 2 9606 Homo sapiens 0.018234992735187916 KIQASTMAFK Unmodified 1123.606 0.6059652 1438 A0A384MTL2;P37802;P37802-2;X6RJP6 TAGLN2 Transgelin-2 yes no 0 0 1 5 0 1 47.752 47.828 3 0.00011214 12796 20230619_1885_Aki_TMTPro18x_K_F5 130.56 92.259 455910 428030 407910 339780 449710 537870 235840 595550 191110 61882 72159 42141 59273 43655 150740 71476 65391 45925 421590 391110 418360 353740 458530 530260 250160 588840 192420 90254 79125 44380 65187 46463 146520 70207 63256 43962 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 374660000 14539 1438 13759 27796 22319 22319 1 9606 Homo sapiens 0.04910645150994242 KIQEESLR Unmodified 1001.5506 0.55055881 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 1 5 0.816 1 1 1 36.942 37.01 3 0.0091331 8259 20230619_1885_Aki_TMTPro18x_K_F5 81.972 41.97 333710 241820 293050 316080 381480 377300 368670 360750 447620 375270 433540 369030 421520 326550 376430 351910 405570 294310 308040 222100 302500 313870 388760 376570 374830 370040 450740 378460 444450 373650 428210 339650 384990 350190 386990 280560 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 593010000 14540 12 13760 27797;27798;27799 22320;22321;22322 22321 3 9606 Homo sapiens 0.049845549548990675 KIQNDAGVR Unmodified 999.54614 0.54614213 3197;2644;4322;507 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5;B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;A0A024R8A7;Q96I24;Q96I24-2 KHSRP;FUBP1;hCG_31253;FUBP3 Far upstream element-binding protein 2;Far upstream element-binding protein 1;Far upstream element-binding protein 3 no no 0 0 1 7.5 0.5 1 1 33.584 33.622 3 0.00012381 6939 20230619_1888_Aki_TMTPro18x_K_F8 137.95 96.924 376870 171620 524460 548680 819810 845580 571670 763660 561440 376450 656570 648440 468420 445570 684600 170420 555940 435380 348640 160450 524960 526130 820540 829770 591170 774790 575490 409440 661310 638720 494340 451700 682300 192360 532330 411160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 419600000 14541 3197;2644;4322;507 13761 27800;27801 22323;22324 22324 2 9606 Homo sapiens 0.046350905319854974 KIQVLQQQADDAEER Unmodified 1769.8908 0.89079049 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;D6R904;Q5VU61;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4 TPM3;DKFZp686J1372 Tropomyosin alpha-3 chain no no 0 0 1 4 0.816 1 1 1 45.898 45.964 3 2.4288000000000004E-25 12008 20230619_1885_Aki_TMTPro18x_K_F5 231.13 205.02 949380 724580 854750 1044100 930560 1093900 1130900 1036300 1117400 1205700 1225400 1016600 1182800 785300 1110300 899130 839470 617490 876780 666080 878680 1028200 966380 1100600 1128000 1067500 1143800 1203400 1249000 1032700 1203000 824420 1114100 886990 804280 590290 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1455300000 14542 1095;1096 13762 27802;27803;27804 22325;22326;22327;22328 22327 4 9606 Homo sapiens 0.036640723076516224 KIQVLQQQADDAEERAER Unmodified 2126.0716 0.071608399 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;D6R904;Q5VU61;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4 TPM3;DKFZp686J1372 Tropomyosin alpha-3 chain no no 0 0 2 4.5 0.5 1 1 46.877 46.937 4 1.7792E-07 12529 20230619_1883_Aki_TMTPro18x_K_F4 120.31 94.664 163450 133730 149180 145020 181430 194050 173860 163620 215280 192410 190400 185060 215820 155650 189730 167360 202480 190400 151030 122540 153180 146220 185750 191870 176980 170010 216010 192770 197590 187130 218040 162340 193950 169370 193520 180640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3097599999.9999995 14543 1095;1096 13763 27805;27806 22329 22329 1 9606 Homo sapiens 0.053615458937201765 KISGGSVVEMQGDEMTR 2 Oxidation (M) 1854.8452 0.8451622 274 V9HW78;B2R5M8;A0A024R3Y6;O75874;Q6FIA4;Q6FI37;C9J4N6;C9JJE5;C9JLU6 HEL-216;IDH1 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 2 1 4 0 1 38.444 38.487 3 0.030782 8930 20230619_1883_Aki_TMTPro18x_K_F4 43.208 37.394 27558 21205 29716 27598 38805 29660 32472 30815 25543 28253 38095 31301 25591 24774 36878 23823 30339 22684 25490 19470 30113 27381 39284 29897 32912 31339 26914 28765 37926 31433 27055 25700 36867 23943 29038 21586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23877000 14544 274 13764 27807 22330 22330 170;171 1 9606 Homo sapiens -0.048066572612924574 KISSIQSIVPALEIANAHR Unmodified 2046.1586 0.15857291 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;B7Z532;Q53QD5 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 1 5 0 1 58.219 58.275 3 8.0115E-19 17188 20230619_1885_Aki_TMTPro18x_K_F5 181.34 135.27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14545 272 13765 27808 22331 22331 1 9606 Homo sapiens 0.17733996906099492 KISSPTGSK Unmodified 903.50255 0.50254598 4405 Q99623;F5GY37;Q99623-2;J3KPX7;F5GWA7;B4DW05;A0A976LZI3;A0A7I2V5F0 PHB2 Prohibitin-2 yes no 0 0 1 3 0 1 37.026 37.08 3 0.0037573 8415 20230619_1882_Aki_TMTPro18x_K_F3 82.489 53.692 49548 28923 91611 79886 158310 117110 115540 123920 75020 56964 100450 71906 56271 46191 137880 21367 50865 35539 46056 26906 90435 76912 157310 115770 117780 124270 79646 61554 99922 71521 62572 47196 133320 23066 49402 33661 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48756000 14546 4405 13766 27809 22332 22332 1 9606 Homo sapiens 0.04693481034871638 KITDGLHALQEASNK Unmodified 1623.858 0.8580338 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 1 1.5 0.5 1 1 51.867 51.887 4 1.5999E-07 15271 20230619_1881_Aki_TMTPro18x_K_F2 127.88 107.45 53879 50389 54744 45483 49592 55683 57062 53365 53602 80224 66071 74837 56705 50269 50397 57495 59715 61231 49871 46085 55407 46538 52104 55525 57020 55382 55431 79400 66847 75263 57883 53049 51913 57857 57055 58112 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206980000 14547 128 13767 27810;27811 22333 22333 1 9606 Homo sapiens 0.07105909975439317 KITDVLAK Unmodified 886.54877 0.54876789 2737 C9J384;D3DN44;Q9BQ75-2;Q9BQ75 CMSS1;hCG_2023567 Protein CMSS1 yes no 0 0 1 3 0 1 49.53 49.607 3 0.032485 13933 20230619_1882_Aki_TMTPro18x_K_F3 56.632 15.908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14548 2737 13768 27812 22334 22334 1 9606 Homo sapiens 0.10095545936940198 KITEAIGIISK Unmodified 1171.7176 0.71762413 2356 B4E0B7;B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00 NCAPD2 Condensin complex subunit 1 yes no 0 0 1 3 0 1 56.593 56.63 3 0.00033194 17029 20230619_1882_Aki_TMTPro18x_K_F3 103.83 61.624 151540 140550 149940 155870 136340 154960 154050 152880 161490 185520 176380 147000 182470 142860 176660 152500 139020 129480 140230 128760 152270 156200 143190 156770 154600 157200 164830 184540 180360 150860 185590 148070 177520 151930 133310 123260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 477040000 14549 2356 13769 27813 22335 22335 1 9606 Homo sapiens 0.13863402779793432 KITGLCQEEHR Unmodified 1369.6772 0.67723266 4047 Q5QPA5;Q9NVS2-3;Q9NVS2;Q9NVS2-2 MRPS18A 28S ribosomal protein S18a, mitochondrial yes no 0 0 1 6.5 0.5 1 1 36.156 36.22 4 2.5901E-06 7731 20230619_1887_Aki_TMTPro18x_K_F7 134.56 108.55 38571 34452 41199 39533 56510 55856 57096 48253 61444 44512 52195 42699 41569 33873 59121 35938 38229 32418 35706 31577 41856 39730 57435 55090 57627 49729 61913 45168 53496 43149 43563 35344 58527 35970 36739 30849 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71229000 14550 4047 13770 27814;27815 22336 22336 1 9606 Homo sapiens 0.007181131177048883 KITIADCGQLE Unmodified 1246.6227 0.62273747 2036;3735 P62937;A8K486;V9HWF5;B4DM82;P62937-2 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase no no 0 0 1 5.5 1.12 1 1 1 1 51.258 51.322 3 9.0936E-05 14550 20230619_1883_Aki_TMTPro18x_K_F4 122.51 112.82 1545600 1226200 1411500 1346100 1371200 1535800 1509900 1556900 1569200 1563800 1574200 1304100 1652800 1342100 1483800 1669400 1447700 1218700 1427900 1123900 1444000 1353000 1431500 1539400 1516800 1588700 1595900 1572200 1616600 1338400 1675700 1400300 1510800 1646900 1383900 1163100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26781000000 14551 2036;3735 13771 27816;27817;27818;27819 22337;22338 22337 2 9606 Homo sapiens 0.009291012463108927 KITIGQAPTEK Unmodified 1184.6765 0.6764876 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 1 2 0 1 44.503 44.586 3 0.012673 11957 20230619_1881_Aki_TMTPro18x_K_F2 67.115 36.458 187650 210330 214980 201020 275080 266630 296180 235810 234610 197970 213310 156590 198850 133580 369270 156640 178940 164210 174120 192340 216950 204800 280930 264160 295330 242120 241560 200900 219290 160240 211050 140000 360810 158150 172950 155940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100660000 14552 2973 13772 27820 22339 22339 1 9606 Homo sapiens 0.09153641740294916 KITNSLTVLCSEK Unmodified 1491.7967 0.79667909 355 A0A024R5S5;O75822;O75822-3;O75822-2;H0YGJ7;H0YLP3 EIF3S1;EIF3J Eukaryotic translation initiation factor 3 subunit J yes no 0 0 1 3 0 1 52.658 52.717 3 0.00011047 15389 20230619_1882_Aki_TMTPro18x_K_F3 102.38 54.238 155450 125440 116320 150840 107670 135380 136100 141730 160770 92057 86975 71312 82945 68578 82210 109150 103290 68593 143420 115060 121510 150030 113550 138180 136310 143070 159210 95181 92441 73410 84807 72936 84912 106690 98382 65707 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196690000 14553 355 13773 27821 22340 22340 1 9606 Homo sapiens 0.07045261951748216 KITVVPSAK Unmodified 941.59097 0.59096706 2806 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 yes no 0 0 1 4 0 1 44.528 44.572 3 0.0013111 11526 20230619_1883_Aki_TMTPro18x_K_F4 88.596 49.574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14554 2806 13774 27822 22341 22341 1 9606 Homo sapiens 0.11783521345330428 KIVANPEDTR Unmodified 1141.6091 0.60913632 3763 P82914;B4DYW3;D3DPS9;Q59EA6 MRPS15 28S ribosomal protein S15, mitochondrial yes no 0 0 1 5.5 0.5 1 1 37.342 37.411 3 0.004022 8498 20230619_1886_Aki_TMTPro18x_K_F6 73.435 46.337 48849 40240 45758 49247 71469 75048 63228 67820 67311 58523 65502 58921 57199 44075 54990 53939 59086 42465 45147 36916 47148 49326 71952 73765 64351 69490 68253 59657 66883 59317 58505 46475 56171 53421 56378 40516 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40012000 14555 3763 13775 27823;27824 22342;22343 22343 2 9606 Homo sapiens 0.04399611529356662 KIVDQIRPDR Unmodified 1238.7095 0.70951906 1328;3137 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3KRZ1;J3QSF1 DDX17;DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 no no 0 0 2 2 0 1 38.947 39.013 3 0.0015658 9323 20230619_1881_Aki_TMTPro18x_K_F2 90.964 44.943 147450 172160 197470 168720 233310 209920 232290 184780 156160 176310 188920 100630 150530 92510 253790 91058 81116 61889 137090 157440 196770 171380 238720 208810 231900 190350 164810 176280 190290 105490 159260 95815 245820 90463 79147 59162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 229850000 14556 1328;3137 13776 27825 22344 22344 1 9606 Homo sapiens 0.09971268583035453 KIVHDYR Unmodified 929.5083 0.50830006 4537 Q9H9B4;D6RDG7;S4R2X2;D6RFI0;D6RAE9;H0Y9J5 SFXN1 Sideroflexin-1 yes no 0 0 1 1 0 1 32.108 32.108 3 0.049832 6826 20230619_1880_Aki_TMTPro18x_K_F1 60.019 44.129 40859 37889 51876 57091 70171 67138 66809 63997 75626 48801 64810 50406 47484 38854 59572 31450 50164 33046 37897 34824 52084 56179 71238 67054 67806 65198 75994 50226 66169 50730 49562 40076 59682 31921 47969 31434 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17175000 14557 4537 13777 27826 22345 22345 1 9606 Homo sapiens 0.04072624337175057 KIVITDCGQLS Unmodified 1232.6435 0.64347291 61 B2R6X6;A0A024QZS4;P30405 PPIF Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase F, mitochondrial yes no 0 0 1 7.5 0.5 1 1 51.411 51.488 2 0.015317 14166 20230619_1888_Aki_TMTPro18x_K_F8 75.682 66.468 94885 90566 104160 108670 104180 109780 112490 106060 106050 115180 122420 104100 106590 76052 126060 93950 96509 81658 87900 83025 105060 108280 108330 110870 112780 108880 109090 115530 124080 105250 110060 80379 126030 93557 92522 77743 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123540000 14558 61 13778 27827;27828 22346 22346 1 9606 Homo sapiens 0.03645691625956715 KIVNSAQTGSFK Unmodified 1278.6932 0.6932003 1768 A0A8I5KSW3;O75964;A0A8I5KT86;A0A8I5KSQ4;A0A3B3ITX4 ATP5L ATP synthase subunit g, mitochondrial yes no 0 0 1 4 0 1 43.808 43.852 3 2.5296E-05 11191 20230619_1883_Aki_TMTPro18x_K_F4 122.2 96.98 146920 109870 140280 158120 179430 189280 177500 188930 191290 170320 188340 137370 140850 106440 185040 87751 125160 89726 135730 101000 143750 156070 183160 188980 179520 192450 193880 172110 191040 139920 147170 109930 183530 88952 120090 85331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118530000 14559 1768 13779 27829 22347 22347 1 9606 Homo sapiens 0.0650014262625973 KKAEPSEVDMNSPK Oxidation (M) 1574.761 0.76102187 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q3SWU7 DDX21 Nucleolar RNA helicase 2 yes no 0 1 2 6.5 0.5 1 1 36.986 37.052 4 0.00099461 8376 20230619_1886_Aki_TMTPro18x_K_F6 84.566 66.866 20696 19190 25971 27648 30213 28187 27879 28839 22636 27507 32614 17473 20112 9866.1 34588 9206.3 12154 8731.7 19193 17628 26010 27226 30909 28482 28105 29375 23763 27539 32370 17956 21522 10436 33538 9321.9 11822 8311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32212000 14560 1748 13780 27830;27831 22348 22348 1143 1 9606 Homo sapiens -0.0033682029588817386 KKAEPSEVDMNSPK Unmodified 1558.7661 0.76610725 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q3SWU7 DDX21 Nucleolar RNA helicase 2 yes no 0 0 2 7 0 1 40.011 40.076 4 0.00036383 9272 20230619_1887_Aki_TMTPro18x_K_F7 94.461 66.812 102700 92478 109360 103350 148190 128430 142240 131050 113610 140850 141220 91770 105060 69167 164950 63262 82463 63514 95071 84736 111060 103870 150290 128140 142880 133920 118590 140220 141820 94633 110940 71930 161560 64034 79566 60392 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48085000 14561 1748 13780 27832 22349 22349 1 9606 Homo sapiens 0.009074835667433945 KKDEEFQR Unmodified 1078.5407 0.5407224 2363 B3KNQ2;V9GY93;Q9HC07-2;Q9HC07 TMEM165 Transmembrane protein 165 yes no 0 0 2 5.5 0.5 1 1 33.961 34.026 4 0.011987 7163 20230619_1885_Aki_TMTPro18x_K_F5 85.355 68.684 121370 55560 139370 144100 224780 228020 193860 206180 225400 143640 216260 232500 190860 179910 210010 86591 253890 209970 112060 51690 141390 139160 225710 223530 198200 210390 227120 151340 221360 229980 196660 182430 214900 95862 242190 198280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82766000 14562 2363 13781 27833;27834 22350 22350 1 9606 Homo sapiens 0.004593669495079666 KKEEVPEFTK Unmodified 1233.6605 0.66050319 1810 P16435;Q59ED7;A8K3B4;B2R6E5;Q63HL4;A0A8V8NE24;H0Y4R2;A0A8V8P1G2;A0A8V8NLF0;E7EWU0;A0A8V8PBF2;A0A8V8NVX2;A0A8V8NKH1;A0A8V8P672;A0A8V8NRY5;A0A8V8NVY2 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase yes no 0 0 2 7 0 1 43.667 43.746 4 0.020689 10798 20230619_1887_Aki_TMTPro18x_K_F7 67.456 39.159 85091 57371 80078 85735 89585 94635 83025 84331 132920 102490 114140 117960 131460 112050 91582 161880 152780 146600 78557 52791 81925 84328 92205 94769 85629 87361 131760 103180 118700 118970 131810 118370 97594 160790 145540 139420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55120000 14563 1810 13782 27835 22351 22351 1 9606 Homo sapiens 0.05301935503416644 KKEGEEEQAINR Unmodified 1429.7161 0.71612059 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;B4E263;A2VDI1;B3KWS1;Q8N7L7;B7ZAU8 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 2 3.5 0.5 1 1 33.484 33.544 4 3.2225E-05 6945 20230619_1883_Aki_TMTPro18x_K_F4 126.1 101.17 58596 23857 67966 65762 91242 102400 74746 85021 94682 71584 91457 115240 103540 84275 77765 50068 117790 107780 54084 22243 68599 63357 92510 100270 76968 87660 95142 74425 94643 113780 104070 86222 81566 54198 112250 101800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44940000 14564 2332 13783 27836;27837 22352 22352 1 9606 Homo sapiens 0.018451169531090272 KKEGETVEPYK Unmodified 1306.6769 0.67688153 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 2 6 0.816 1 1 1 38.99 39.069 4 0.00057826 9186 20230619_1886_Aki_TMTPro18x_K_F6 100.22 74.18 181740 144980 190100 193310 274020 253180 243070 238990 209650 231990 262340 170140 190400 138640 272490 104180 126730 76771 168080 133140 193650 192020 276600 251230 245890 244850 217660 232850 263090 174520 200090 142350 266650 104340 122310 73391 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 605370000 14565 3811 13784 27838;27839;27840 22353;22354 22353 2 9606 Homo sapiens 0.03581016669522796 KKEPAITSQNSPEAR Unmodified 1654.8638 0.86384745 1319 P23193;A0A384MTX4;A0A1W2PPZ5;B7Z4W0;P23193-2;A0A1W2PRL9;E5RIS7 TCEA1 Transcription elongation factor A protein 1 yes no 0 0 2 8 0 2 35.087 35.077 3;4 1.5419E-07 7528 20230619_1888_Aki_TMTPro18x_K_F8 132.25 127.64 232320 148350 187270 218950 246400 265050 243070 237380 299820 278680 347970 329090 282260 259620 301900 304300 312600 255790 214180 136520 195060 215790 251310 263820 247010 245530 303950 281010 351760 329520 291200 272220 307240 302430 298600 243670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 274710000 14566 1319 13785 27841;27842 22355;22356 22355 2 9606 Homo sapiens 0.06261008487081199 KKEPEPNFQLLDNPAR Unmodified 1894.9901 0.9901106 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;A0A7I2V479 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 2 7.5 0.5 1 1 47.667 47.74 4 8.0338E-08 12559 20230619_1888_Aki_TMTPro18x_K_F8 125.5 103.9 219330 187940 214220 244000 209540 258970 240220 245800 270140 275650 272850 258560 300510 220860 264700 327610 259800 266650 202830 172490 218190 241950 219090 260340 241420 252810 273720 276440 280930 262160 303860 234790 269890 323900 248670 253890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 963090000 14567 832 13786 27843;27844 22357 22357 1 9606 Homo sapiens 0.07841514992378507 KKHPDSSVNFAEFSK Unmodified 1719.858 0.8580338 4068;3509 Q5U071;D6R9A6;P26583 HMGB2 High mobility group protein B2 no no 0 0 2 2 0 1 43.994 44.076 5 0.00056279 11710 20230619_1881_Aki_TMTPro18x_K_F2 91.076 44.668 186270 174630 263930 237400 231370 218960 283090 239090 137680 218800 260380 128110 91087 58532 293210 50133 90258 67262 172990 160300 260990 234420 243360 223350 278110 242450 153460 219090 253480 131970 107480 62439 282060 52277 88161 63788 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195750000 14568 4068;3509 13787 27845 22358 22358 1 9606 Homo sapiens 0.026899099754018607 KKNEPEDEEEEEEEEDEDEEEEDEDEE Unmodified 3383.1976 0.19757291 3509 P26583 HMGB2 High mobility group protein B2 yes yes 0 0 2 1.5 0.5 1 1 42.243 42.283 4 0.030227 10827 20230619_1881_Aki_TMTPro18x_K_F2 46.678 46.472 33822 25746 30904 32701 27943 41001 40389 36974 41740 43626 36619 31617 34162 29072 33461 31340 26946 22454 31238 23635 31623 32558 29672 40707 40029 38222 42259 43369 37677 32542 34900 30190 33666 30979 25814 21437 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83081000 14569 3509 13788 27846;27847 22359 22359 1 9606 Homo sapiens -0.39869797103847304 KKPFVYTQGQAVLNR Unmodified 1747.9733 0.97333832 4514 Q9H4A4;A6NKB8;Q7RU04;A0A087WU27;C9JMZ3;A0A087WUS4 RNPEP Aminopeptidase B yes no 0 0 2 8 0 1 45.561 45.589 4 0.00094116 11713 20230619_1888_Aki_TMTPro18x_K_F8 85.006 72.646 128120 106700 112720 123780 120630 115040 119190 123700 123850 140940 160940 151300 129910 126100 129580 163000 143520 152690 118360 97830 115930 123530 124520 117280 120480 126250 127430 141760 161950 152350 133650 132760 132740 162530 137240 145100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55676000 14570 4514 13789 27848 22360 22360 1 9606 Homo sapiens 0.1292705889707122 KKPNPVEEEPSR Unmodified 1408.731 0.73104237 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 2 6 0.816 1 1 1 34.935 35.007 4 6.4075E-05 7596 20230619_1886_Aki_TMTPro18x_K_F6 119.52 102.31 72016 51983 67659 62397 55310 66341 63532 65331 78643 76756 83218 72130 86244 68656 65959 75675 76569 60843 66508 47704 68873 62240 58726 66758 64090 67109 79437 76832 85192 73348 86925 71308 68061 75095 73050 58004 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94362000 14571 3588 13790 27849;27850;27851 22361 22361 1 9606 Homo sapiens 0.043026088210808666 KKVPVSVNLLSK Unmodified 1310.8286 0.82857157 3325 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3C4 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 2 6.5 0.5 1 1 49.785 49.866 4 0.033082 13855 20230619_1886_Aki_TMTPro18x_K_F6 60.628 52.115 68973 75570 77978 65082 86685 71726 93991 74280 62701 58746 52669 38375 45561 34424 68286 39217 37332 28657 63982 69058 78499 66788 89231 72218 93349 75337 65270 59568 54184 39778 47740 35917 67166 38847 35958 27362 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183140000 14572 3325 13791 27852;27853 22362 22362 1 9606 Homo sapiens 0.1855904248789102 KLAEENPDLQEAYIAK Unmodified 1830.9363 0.9363437 1624 Q8TB36;Q8TB36-2;A0A6Q8PGS2;A0A6Q8PGL3;B4DIH2;A0A6Q8PH79;A0A6Q8PFG4;A0A7I2RYU0;A0A6Q8PEZ4;A0A6Q8PHN7;A0A6Q8PH88;A0A6Q8PEX8;A0A6Q8PH97;A0A6Q8PGU0;A0A6Q8PHC1;A0A6Q8PFF4 GDAP1 Ganglioside-induced differentiation-associated protein 1 yes no 0 0 1 5 0.816 1 1 1 51.894 51.953 3 1.6116E-07 14593 20230619_1885_Aki_TMTPro18x_K_F5 121.19 100.82 109130 94024 125490 130630 75175 82455 104760 107760 96422 133730 148250 163760 134920 121330 158000 146160 144360 161330 101070 86357 125380 128300 82767 87617 103810 109130 100860 134530 149260 163370 139220 127830 159450 147370 138380 153010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 202780000 14573 1624 13792 27854;27855;27856 22363;22364 22364 2 9606 Homo sapiens 0.05411297770024248 KLAFAYLEDLHSEFDEQHGK Unmodified 2376.1386 0.13862533 3304 O75396;I1VE18 SEC22B Vesicle-trafficking protein SEC22b yes no 0 0 1 7 0 1 60.561 60.604 5 3.2799E-55 18074 20230619_1887_Aki_TMTPro18x_K_F7 282.22 268.99 79696 74625 91250 86883 68610 85391 83187 73789 86908 100330 87995 78358 84350 59481 121050 60455 53548 50280 73848 68395 91372 86743 73484 86201 83185 76934 88453 99284 90098 79821 87770 62093 118380 60387 51864 47876 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143200000 14574 3304 13793 27857 22365 22365 1 9606 Homo sapiens 0.0056015638474491425 KLANLINAEER Unmodified 1269.7041 0.70409934 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 1 8 0 1 49.833 49.906 3 0.0028658 13490 20230619_1888_Aki_TMTPro18x_K_F8 76.522 60.269 490950 363740 401400 375060 451710 578460 462470 421430 664320 203850 188340 154290 169260 133600 316340 175270 169350 125030 453010 333300 415890 380640 466770 565770 471430 435590 644860 217280 214850 158470 180380 140720 310180 173140 163150 119450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101880000 14575 1853 13794 27858 22366 22366 1 9606 Homo sapiens 0.08003545000565282 KLANSEPVGTQTAK Unmodified 1442.7729 0.77290718 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;A0A804HL78;O94854;A0A0A6YYJ5 MACF1;KIAA0754 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5;Uncharacterized protein KIAA0754 yes no 0 0 1 8 0 1 40.239 40.228 3 0.015142 9594 20230619_1888_Aki_TMTPro18x_K_F8 63.212 50.232 18878 14811 19761 19771 22943 25764 24463 24028 27096 24326 25738 25070 28294 17938 27482 15872 21078 17521 17458 13602 20052 19636 23621 25552 24656 24670 27398 24591 26583 25153 28702 18660 27539 16120 20205 16637 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19642000 14576 1566 13795 27859 22367 22367 1 9606 Homo sapiens 0.06923164509612434 KLAPEYEK Unmodified 976.52295 0.52294707 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 1 6.5 0.5 1 1 42.423 42.507 3 0.04087 10544 20230619_1886_Aki_TMTPro18x_K_F6 60.434 18.325 355590 281530 326640 331720 428030 438740 442480 404740 478740 446940 514280 490850 474140 386560 493810 425130 501310 438990 328510 258210 335790 332340 436740 434870 446280 416960 486930 450810 524160 492740 485960 404290 501800 427670 479150 417040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 964760000 14577 909 13796 27860;27861 22368;22369 22368 2 9606 Homo sapiens 0.03374651694662134 KLAPITYPQGLAMAR Oxidation (M) 1644.9021 0.90214722 3680 P60763;J3KSC4;J3QLK0 RAC3 Ras-related C3 botulinum toxin substrate 3 yes no 0 1 1 6 0 1 50.687 50.764 3 0.011611 14231 20230619_1886_Aki_TMTPro18x_K_F6 82.259 67.698 106980 94344 113520 137820 140220 123130 140330 130190 139110 112430 143860 127420 108350 92216 153150 109920 89942 79030 99024 86695 115290 135350 143230 125830 141440 132130 141830 115040 145810 127550 113740 97143 151220 108630 86591 75430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118020000 14578 3680 13797 27862 22370 22370 2374 1 9606 Homo sapiens 0.10549222868030483 KLASQGDSISSQLGPIHPPPR Unmodified 2184.1651 0.16511485 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 0 1 2.5 0.5 1 1 46.377 46.456 4 5.3077000000000005E-30 12466 20230619_1882_Aki_TMTPro18x_K_F3 207.22 195.97 85531 86261 98204 109140 97607 117250 103970 99665 113870 103190 111650 91249 108330 82264 120360 90763 95939 97009 79300 79106 98774 108420 101640 117520 104790 103160 115320 103770 114420 92921 111130 85680 120670 91526 92037 92069 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 407630000 14579 3197 13798 27863;27864 22371 22371 1 9606 Homo sapiens 0.12039890066762382 KLAVNMVPFPR Unmodified 1270.722 0.72199801 3748;1486;3381;983;1424;3870;2562;3176;3970 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B4DMU8;B4DXZ5;Q96B85;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DJ43;B4DE77;B4DFH6;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB3;TUBB2B;DKFZp566F223;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB8;TUBB4A;TUBB6 Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 0 1 7 0 1 54.39 54.454 3 9.9593E-06 15516 20230619_1887_Aki_TMTPro18x_K_F7 143.96 117.58 1137100 1914800 1605800 1138700 1609400 2238600 648050 1287200 1003600 231730 208450 114180 178310 105820 1009100 104000 127580 100420 1062000 1744300 1589000 1231100 1649300 2159600 723490 1350200 969500 289080 250970 122040 221630 109680 957830 107260 130400 95515 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1006099999.9999999 14580 983;1424;1486;3748;3870;3970;3381;2562;3176 13799 27865 22372 22372 1 9606 Homo sapiens 0.09746588721714033 KLCQGLFFR Unmodified 1167.6223 0.62228396 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;B7Z602 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 1 7 0 1 51.912 51.986 3 0.00047389 14465 20230619_1887_Aki_TMTPro18x_K_F7 115.71 83.494 328000 311300 335210 344050 397990 489350 439490 436220 420560 197160 161350 89859 95115 77602 287600 97849 89628 35653 303650 285160 341050 346750 409760 482430 439920 442780 418500 209170 174820 95979 108230 81540 277080 95180 87295 34720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161270000 14581 874 13800 27866 22373 22373 1 9606 Homo sapiens 0.04517771107748558 KLDALCNIHENIR Unmodified 1594.825 0.82495953 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITV3 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 1 1.5 0.5 1 1 46.372 46.411 4 1.0079E-10 12870 20230619_1880_Aki_TMTPro18x_K_F1 174.24 147.8 258500 205710 245780 258230 221180 271790 291360 263760 288160 325880 276250 265310 354290 257680 252620 379640 335090 317480 238890 188790 250500 256660 233730 273560 289570 271720 293600 324130 287270 271980 354070 272690 263910 375660 319690 302270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 260420000 14582 3647 13801 27867;27868 22374 22374 1 9606 Homo sapiens 0.05134004651699797 KLDAQVQELHAK Unmodified 1378.7569 0.75686319 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 1 8 0 1 43.797 43.807 3 4.9074E-05 11010 20230619_1888_Aki_TMTPro18x_K_F8 111.79 85.855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14583 3549 13802 27869 22375 22375 1 9606 Homo sapiens 0.08263503063358257 KLDDAIEDCTNAVK Unmodified 1590.7559 0.75593649 1609;2515 B4DKK3;Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2 DNAJC7 DnaJ homolog subfamily C member 7 no no 0 0 1 5.5 0.5 1 1 50.647 50.723 3 7.565E-07 14075 20230619_1885_Aki_TMTPro18x_K_F5 132.44 92.372 170710 165030 164550 192690 173710 197850 195910 168400 190630 187940 179730 123430 165770 124270 174470 160690 133530 113700 157990 151240 168000 192360 180310 199030 196040 174690 194100 186980 183980 128430 169860 130150 174930 158340 128020 108560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 211970000 14584 2515;1609 13803 27870;27871 22376;22377 22376 2 9606 Homo sapiens -0.015811241585197422 KLDDFVETGDIR Unmodified 1406.7042 0.70415892 760 A0A1W2PPX5;A0A1W2PQR6;A0A1W2PQB7;A0A1W2PS43;A0A024RDG6;A0A1W2PRS1;Q14108;A0A1W2PPU6;Q14108-2;A0A1W2PRF6 SCARB2 Lysosome membrane protein 2 yes no 0 0 1 4.5 0.5 1 1 52.113 52.187 3 0.00022234 14700 20230619_1885_Aki_TMTPro18x_K_F5 99.011 81.685 192090 131660 147720 176330 189740 183350 179760 181560 233240 225200 244870 239710 215080 232470 233780 279250 242930 278760 177100 120990 154510 174450 193490 184890 183470 186780 235030 225760 249390 242560 221700 242280 238180 279710 232590 264640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113930000 14585 760 13804 27872;27873 22378;22379 22379 2 9606 Homo sapiens 0.017075002099318226 KLDEAVAEAHLGK Unmodified 1379.7409 0.74087877 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 1 6 0.816 1 1 1 49.352 49.432 4 0.00016917 13642 20230619_1886_Aki_TMTPro18x_K_F6 96.993 74.272 3571800 2734500 3359100 3165000 3175000 3671800 3495100 3403400 3454700 4990100 4660200 4309500 5620200 4168300 4065100 5586100 4943100 4883900 3299800 2508000 3426100 3169000 3322200 3668900 3506400 3537000 3578000 4935100 4762900 4402800 5627300 4382000 4217900 5546900 4720700 4646400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9304000000 14586 1439 13805 27874;27875;27876 22380 22380 1 9606 Homo sapiens 0.06619796826453239 KLDELYGTWR Unmodified 1279.6561 0.65608651 3558 Q59GY2;P36578;B4DMJ6;H3BM89;B4DMJ2;Q53G74 RPL4 60S ribosomal protein L4 yes no 0 0 1 4.5 3.5 1 1 54.187 54.222 3 1.0008E-05 16064 20230619_1880_Aki_TMTPro18x_K_F1 138.24 113.54 1213100 1251200 849790 939790 1021900 1346600 1067100 1534800 864630 1601700 535200 724280 1635200 822540 845890 2374700 501160 1450700 1120800 1142600 896860 981740 1051100 1335700 1068100 1553800 885740 1586300 613760 780180 1592300 929400 864030 2304300 489420 1384200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1743699999.9999998 14587 3558 13806 27877;27878 22381;22382 22381 2 9606 Homo sapiens 0.02744471080495714 KLDEQYQK Unmodified 1050.5346 0.53457439 2835 Q6FH24;D3DWY7;P61758-2;P61758 VBP1 Prefoldin subunit 3 yes no 0 0 1 6.5 0.5 1 1 40.502 40.582 3 0.0019875 9755 20230619_1886_Aki_TMTPro18x_K_F6 111.65 62.284 485440 208570 628030 653350 810550 849750 675410 755280 668760 549270 924310 1043900 724820 749170 850960 300400 1026700 965210 448630 194960 628940 624830 822960 841280 689230 772610 690900 581110 928670 1026000 752950 758830 869600 348210 980240 909950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 484510000 14588 2835 13807 27879;27880 22383 22383 1 9606 Homo sapiens 0.011328487179980584 KLDGFPLLR Unmodified 1057.6284 0.6284152 3422 Q53G61;Q53G21;P09661;H0YKK0;Q6NVW9 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 1 3.5 0.5 1 1 55.456 55.482 3 0.00071151 16405 20230619_1883_Aki_TMTPro18x_K_F4 108.93 59.769 564840 472900 533560 572960 479320 577500 559370 596190 634980 636290 604340 586210 675760 552570 606290 745970 611350 706950 522130 433760 544070 570560 504830 583980 561950 608770 641630 639350 624520 596590 683960 581450 618840 743890 585550 671520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 360890000 14589 3422 13808 27881;27882 22384;22385 22385 2 9606 Homo sapiens 0.10190612610927019 KLDHCNIVR Unmodified 1153.6026 0.60261115 2663;98 P49840;A0A024R0L5;A8MT37;Q68D16;A0A7I2YQG6;A0A7I2V2J2;M0QYV0;A0A7I2V2P0;A0A7I2V4X2;P49841-2;P49841;B5BUC0;Q6FI27;A0A7I2YQK0;A0A3B3ITW1;A0A7I2V5M2;A0A7I2V5G5 GSK3A;DKFZp686D0638;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta no no 0 0 1 1.5 0.5 1 1 34.385 34.414 4 0.0002359 7746 20230619_1880_Aki_TMTPro18x_K_F1 129.85 102.11 479690 345790 513930 495260 606520 555780 578180 609040 631710 476830 640140 577500 499910 474450 598050 475900 721920 542460 443490 317930 520360 488720 620890 558740 586450 614890 640070 492140 650020 578510 519820 492670 612480 482410 688290 515180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 207200000 14590 98;2663 13809 27883;27884 22386;22387 22387 2 9606 Homo sapiens 0.03195395097009168 KLDLEAWFPGSGAFR Unmodified 1692.8624 0.86239089 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 1 3.5 0.5 1 1 62.949 62.967 3 0.00089297 19584 20230619_1883_Aki_TMTPro18x_K_F4 79.393 57.52 180620 149600 173480 192320 140310 177850 179290 180150 206870 186990 180750 230620 247840 224820 260220 249660 233640 314930 166980 137310 176460 190510 149630 180930 179410 184150 208170 190000 190070 231860 251490 233440 262880 254160 224360 298130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 488720000 14591 3609 13810 27885;27886 22388 22388 1 9606 Homo sapiens 0.04367419188952226 KLDLSDTK Unmodified 918.50221 0.50221163 1120 A0A0S2Z583;Q8TC12;A0A0S2Z575;Q8TC12-2;Q8TC12-3;A0A0S2Z5W8;A0A0S2Z613;Q96NR8 RDH11;RDH12 Retinol dehydrogenase 11;Retinol dehydrogenase 12 yes no 0 0 1 7 0 1 45.04 45.126 3 0.043347 11365 20230619_1887_Aki_TMTPro18x_K_F7 53.237 23.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14592 1120 13811 27887 22389 22389 1 9606 Homo sapiens 0.039700613149989294 KLDPAQSASR Unmodified 1071.5673 0.5672715 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 7.5 0.5 1 1 35.143 35.173 3 0.021393 7519 20230619_1888_Aki_TMTPro18x_K_F8 63.164 46.493 93672 48712 100740 108140 135440 143330 122200 135280 145970 88543 108720 109350 99443 84312 121900 56916 121020 89606 86473 45147 102320 104670 137540 141950 124710 137450 145680 92703 112960 109150 102860 86386 123130 59699 115580 84877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 250140000 14593 1022;3868 13812 27888;27889 22390 22390 1 9606 Homo sapiens 0.034350558408505094 KLDPELHLDIK Unmodified 1319.7449 0.74490152 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 1 6.71 0.881 1 1 4 1 56.025 56.09 3;4 0.00037544 14267 20230619_1887_Aki_TMTPro18x_K_F7 105.03 61.944 1118400 1004000 1060700 1130800 1044700 1267200 1215100 1217800 1289200 1334600 1271300 1290400 1405700 1379000 955620 1451900 1030800 1328700 1034400 920050 1082700 1133600 1091900 1269900 1217800 1250500 1309200 1341300 1310700 1315000 1410100 1422500 986730 1449700 987560 1262200 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 9356900000 14594 2621 13813 27890;27891;27892;27893;27894;27895;27896 22391;22392;22393;22394;22395 22392 5 9606 Homo sapiens 0.0978188632018373 KLDPGSEETQTLVR Unmodified 1571.8155 0.81550028 3510 Q53YD7;P26641;P26641-2;B4DUP0 EEF1G Elongation factor 1-gamma yes no 0 0 1 4.5 1.12 1 1 1 1 44.499 44.57 3 0.00088687 11644 20230619_1882_Aki_TMTPro18x_K_F3 84.946 73.03 137950 101860 117370 128170 122120 134120 132810 134120 134990 153170 173770 174340 178970 157010 155290 176690 181870 177120 127330 93509 121070 127360 126790 135180 133420 137540 139010 154380 176680 175470 181390 163540 159910 177220 173720 168250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6604999999.999999 14595 3510 13814 27897;27898;27899;27900 22396 22396 1 9606 Homo sapiens 0.05246514847181061 KLDSELTAR Unmodified 1031.5611 0.56112349 1901 A0RZB8;Q6URC4;O60610-2;O60610-3;O60610;A0A1E1ERW3;A0A2R8Y5N1 DIAPH1 Protein diaphanous homolog 1 yes no 0 0 1 6 0.816 1 1 1 40.982 41.065 3 0.024398 9961 20230619_1885_Aki_TMTPro18x_K_F5 63.212 45.886 302880 226160 275150 283400 284430 311970 298090 267630 354130 341410 383160 369440 385410 336500 363920 398860 469810 395040 279700 207600 281980 281860 295190 312320 301500 278580 358710 342070 391770 372780 392440 351440 376430 399530 447970 375520 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 312910000 14596 1901 13815 27901;27902;27903 22397;22398 22397 2 9606 Homo sapiens 0.04660537609311177 KLDVEEPDSANSSFYSTR Unmodified 2043.9385 0.93852854 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 4.5 1.12 1 1 1 1 48.64 48.705 3 1.9109E-48 13184 20230619_1885_Aki_TMTPro18x_K_F5 224.4 218.28 391230 325130 367640 417730 351260 447240 401200 384310 387720 443760 441010 444400 509130 429820 450690 522560 447740 498680 361610 298410 375550 414510 367910 448410 401340 398680 398250 445280 453030 450750 514590 448760 459580 522110 428770 473710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 632860000 14597 349;3906 13816 27904;27905;27906;27907 22399;22400;22401 22401 3 9606 Homo sapiens -0.04168318282859218 KLDVVVR Unmodified 827.52289 0.52288749 4395 Q96SB3 PPP1R9B Neurabin-2 yes yes 0 0 1 2 0 1 42.382 42.462 3 0.066869 10967 20230619_1881_Aki_TMTPro18x_K_F2 56.729 36.943 143530 121920 140950 155730 167680 177470 155100 168640 183670 202300 223260 246080 230270 192400 200700 227810 239440 235540 132730 111880 143870 154750 171700 177620 158090 173770 187190 203910 227640 245920 233380 202090 206890 228730 228690 223650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48338000 14598 4395 13817 27908 22402 22402 1 9606 Homo sapiens 0.10222696485334382 KLEAAEDIAYQLSR Unmodified 1605.8362 0.83623572 2035 Q6FHP5;A8K401;P35232;Q6PUJ7;Q53FV0;C9JZ20 PHB;HEL-S-54e Prohibitin yes no 0 0 1 7 0.816 1 1 1 60.894 60.938 3 6.5429E-09 18156 20230619_1888_Aki_TMTPro18x_K_F8 161.24 128.01 495530 516110 563750 583380 592970 641440 708030 679740 583270 734620 723430 549910 668040 487520 813960 504750 464320 408550 459500 472740 567670 584630 615890 645270 703490 693110 607480 733380 732530 564640 689330 506280 804100 502740 447250 389270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3052999999.9999995 14599 2035 13818 27909;27910;27911 22403 22403 1 9606 Homo sapiens 0.057551052268536296 KLEAAEER Unmodified 944.49271 0.49270958 2660;2878 B5BU83;P16949;A2A2D0;Q96CE4;A0A140VJW2;P16949-2;Q59G27;E5RIR6;E7EVN3;B7Z1W4;Q9H169-3;Q9H169;Q9H169-4;Q9H169-2;E5RGX5;Q93045;B7Z4N6;Q93045-2;B7Z4K3 STMN1;STMN4;STMN2 Stathmin;Stathmin-4;Stathmin-2 no no 0 0 1 3.17 1.07 2 2 1 1 35.152 35.213 2;3 0.014633 7646 20230619_1882_Aki_TMTPro18x_K_F3 91.087 59.858 173520 88971 252300 269930 285220 299630 222510 291770 216330 170730 360170 421160 220770 271400 338230 81607 380320 346780 160680 83007 250280 257730 291600 300170 228260 295380 225940 186500 357260 410570 235850 274670 342720 100790 363240 326690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7296199999.999999 14600 2660;2878 13819 27912;27913;27914;27915;27916;27917 22404;22405 22405 2 9606 Homo sapiens 0.018242930294718462 KLEAGIR Unmodified 785.47594 0.4759373 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 1 3.67 3.09 1 1 1 37.655 37.671 3 0.031734 8517 20230619_1888_Aki_TMTPro18x_K_F8 70.525 28.872 378180 282450 304620 315560 442820 433730 419440 441490 516940 344570 328680 276260 329520 266320 331400 267330 356250 245790 348940 258990 317670 317650 448280 429960 427070 447610 513210 351660 345820 283330 336380 275210 337910 267710 339850 234090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 793010000 14601 3811 13820 27918;27919;27920 22406;22407 22407 2 9606 Homo sapiens 0.0746183693418061 KLEDDRNSLQAAK Unmodified 1486.774 0.77396981 4038 Q5JRA6-2;Q5JRA6;Q5JRA6-4 MIA3 Melanoma inhibitory activity protein 3 yes no 0 0 2 7 0 1 40.631 40.699 3 0.0013577 9534 20230619_1887_Aki_TMTPro18x_K_F7 84.718 55.953 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14602 4038 13821 27921 22408 22408 1 9606 Homo sapiens 0.05005378878513511 KLEDGPK Unmodified 785.42832 0.42831841 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;B4DNE0;Q8IUB0;Q9H2I7;A0A4D5RA52;A0A087WV01;Q504Z0;Q53HR1;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q16577;Q6P082;A0A4D5RBK4;A0A4D5RBD4;A0A4D5RBH1;A0A4D5RAB6;Q2F837;Q96EB3;A0A4D5RBE6;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 1 5.5 1.12 1 1 1 1 38.149 38.217 3 0.037595 8770 20230619_1886_Aki_TMTPro18x_K_F6 68.224 25.197 160260 58067 211960 199610 380340 309200 238440 346170 207920 154860 296990 325370 219820 241220 308250 76815 298480 231320 148070 54483 213310 191180 376800 305080 248080 345580 216850 171770 297530 319460 231280 242740 310010 89332 285210 218310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5958299999.999999 14603 1560;3997 13822 27922;27923;27924;27925 22409 22409 1 9606 Homo sapiens 0.02702137943344951 KLEDQNEYESR Unmodified 1409.6423 0.64228694 2193 B3KW33;B7Z4Q6;B1AKJ6;Q96SU4-5;Q96SU4-4;Q96SU4-3;Q96SU4-7;Q96SU4-2;Q96SU4;Q96SU4-6;Q9BRN2;A0A096LPC8 OSBPL9 Oxysterol-binding protein;Oxysterol-binding protein-related protein 9 yes no 0 0 1 2.5 0.5 1 1 36.9 36.957 3 3.3125E-06 8493 20230619_1881_Aki_TMTPro18x_K_F2 147.18 128.82 69129 54503 61739 66788 90223 87036 80860 74786 80664 79805 102290 75415 71478 60149 106540 59057 74349 49458 63851 50009 63778 66695 91112 86228 82060 77382 83012 80251 102470 76292 75533 62480 105670 59006 71275 47168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51169000 14604 2193 13823 27926;27927 22410 22410 1 9606 Homo sapiens -0.04614851209248627 KLEEEGEQFVK Unmodified 1334.6718 0.67179615 1485 B4E0J3;H0YF61;B2R761;A0A384NY87;P22307-6;P22307-2;P22307-4;P22307-7;P22307-8;P22307 SCP2 Non-specific lipid-transfer protein yes no 0 0 1 4 0 1 49.451 49.486 3 0.00023088 13756 20230619_1883_Aki_TMTPro18x_K_F4 111.31 82.986 362420 277470 315170 356130 402380 562380 465470 437410 602950 480920 511070 647020 608680 547100 537000 698750 687030 762760 334620 254740 325890 355690 414000 549750 469570 456630 602490 489160 533870 645800 615180 575500 556510 702780 656420 723510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237830000 14605 1485 13824 27928 22411 22411 1 9606 Homo sapiens 0.017847128068979146 KLEEEQIILEDQNCK Unmodified 1887.9248 0.92479273 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5;Q99529 MYH9 Myosin-9 yes no 0 0 1 3 0.816 2 2 2 52.529 52.568 3;4 2.9116E-08 15143 20230619_1883_Aki_TMTPro18x_K_F4 142.45 129.47 255080 209870 245690 256890 240450 278700 293410 270280 313170 303030 270350 268870 319010 246340 284640 350350 305100 319910 235800 192530 250400 255880 251680 279960 293320 277620 316340 303490 281550 273860 322270 260470 291540 348480 291830 304120 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 927530000 14606 148 13825 27929;27930;27931;27932;27933;27934 22412;22413;22414 22414 3 9606 Homo sapiens 0.01634732684374285 KLEELELDEQQRK Unmodified 1656.8683 0.86826413 1774 A0A8I5KVF6;A0A8I5QJL9;A0A8I5QJ96;A0A8I5KYS7;B4DFY5;A4QPA9;A0A8I5KYB4;Q02750-2;Q02750;A0A8I5KRX5;A0A8I5QJC1;A0A8I5KXN4;A0A8I5QJP8 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 yes no 0 0 2 4.5 0.5 1 1 46.888 46.948 4 0.0025083 12592 20230619_1883_Aki_TMTPro18x_K_F4 79.771 58.313 149250 121290 123170 162770 138090 170730 148210 173630 195780 185490 186250 200470 240290 201390 146200 272020 236180 234270 137810 111380 127780 161000 142820 172020 150360 177440 196440 187330 193870 203010 239130 211390 155980 269720 225090 222910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 514240000 14607 1774 13826 27935;27936 22415 22415 1 9606 Homo sapiens 0.066104729099834 KLEELEQK Unmodified 1015.555 0.55497548 1598 P42224;P42224-2;A0A669KB53;A0A669KBA4;A0A669KB56;A0A669KB68;A0A8V8TN81;A0A669KBI6;J3KPM9;A0A669KB52;A0A669KB75;E7EPD2 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription yes no 0 0 1 4.5 0.5 1 1 46.69 46.75 3 0.0089838 12376 20230619_1885_Aki_TMTPro18x_K_F5 82.379 8.658 71414 59375 69290 78796 83483 86061 81513 82414 106700 90098 113680 102570 103370 88264 92030 99671 109120 97110 66025 54513 70828 78053 85535 86398 83084 84658 107460 91062 115750 103130 105300 92105 94763 99826 104160 92307 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204200000 14608 1598 13827 27937;27938 22416 22416 1 9606 Homo sapiens 0.04782019377819324 KLEELIQGAQCVHSPR Unmodified 1863.9625 0.96251564 1304 Q15477;A0A8V8TLC0;A0A1U9X8J0;A0A1U9X8J1;A0A1U9X8J2;A0A1U9X8J6;Q96BC0;O76046;Q9NPK3;A0A8V8TL97;H7C4L3;H7C5N0;A0A8V8TLA2;B4E0N1;B4DM01;A0A8V8TN04;A0A1U9X8I7;A0A1U9X8I9;B4DSY1;Q59F56 SKIV2L;SKI2W Helicase SKI2W yes no 0 0 1 2 0 1 52.56 52.593 4 8.6489E-11 15587 20230619_1881_Aki_TMTPro18x_K_F2 145.91 128.21 102370 64796 97081 107060 77680 106020 90939 94742 107620 92406 96032 111560 139040 85837 107310 142830 126360 126830 94483 59716 98838 104560 82777 106920 91492 97546 108230 94115 101050 111570 138830 92512 110920 141590 120720 120630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 217910000 14609 1304 13828 27939 22417;22418 22418 2 9606 Homo sapiens 0.06509288460483731 KLEELQQK Unmodified 1014.571 0.5709599 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2YQI1;A0A7I2V4R2;B7ZA24;P40763-3;P40763-2;A0A7I2YQD2;A0A7I2V4R3;A0A7I2V395;A0A7I2V2G1;A0A7I2V552;A0A7I2V4F6;A0A7I2V2T1;B5BTZ6 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 0 1 7 0 1 44.376 44.459 3 0.0038343 11100 20230619_1887_Aki_TMTPro18x_K_F7 87.806 5.856 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14610 1660 13829 27940 22419 22419 1 9606 Homo sapiens 0.06425725614724342 KLEEVER Unmodified 901.4869 0.48689592 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 3 0.816 1 1 1 37.165 37.217 3 0.022236 8458 20230619_1882_Aki_TMTPro18x_K_F3 78.149 14.99 319210 171080 315980 352020 416380 459290 399690 408340 477690 397330 492160 503150 485010 421740 398950 245840 589410 493340 294510 158330 323000 341640 424190 454760 406360 420340 482480 405530 503920 502690 491340 428730 416750 264310 561440 466310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 401090000 14611 3152 13830 27941;27942;27943 22420 22420 1 9606 Homo sapiens 0.032211945178119095 KLEEVVNK Unmodified 957.5495 0.54949617 2690 B7Z592;Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes no 0 0 1 8 0 1 45.838 45.877 3 0.037766 11837 20230619_1888_Aki_TMTPro18x_K_F8 52.725 21.304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14612 2690 13831 27944 22421 22421 1 9606 Homo sapiens 0.06902340586009359 KLEGGQQVGMHSK Oxidation (M) 1413.7034 0.70344741 391 A0A024R6D1;A0A7I2V5R1;Q8TD19;A0A7I2V454;Q6PKF2 NEK9 Serine/threonine-protein kinase Nek9 yes no 0 1 1 8 0 1 34.181 34.177 4 0.000211 7168 20230619_1888_Aki_TMTPro18x_K_F8 100.42 67.473 33013 24337 39909 36897 57176 52283 50545 43981 56390 35650 54891 59263 46824 39340 51767 44789 62562 54670 30560 22389 40201 36418 57739 51520 51506 45305 56962 37227 56078 58416 48291 41520 53105 45498 59700 51850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26314000 14613 391 13832 27945 22422 22422 251 1 9606 Homo sapiens 0.013143822892061507 KLEGNSPQGSNQGVK Unmodified 1541.7798 0.77978347 452 A0A024R7I3;P61006 RAB8A Ras-related protein Rab-8A yes no 0 0 1 8 0 1 38.01 37.996 3 5.4308E-09 8673 20230619_1888_Aki_TMTPro18x_K_F8 144.97 111.67 54657 23777 66447 73308 88522 114150 64531 87249 88221 75282 106610 128510 109960 110730 76775 44192 131710 129640 50483 22216 66900 70356 89707 111550 67279 90610 89219 78380 108760 127240 110690 111310 81486 50391 125470 122240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39146000 14614 452 13833 27946 22423 22423 1 9606 Homo sapiens 0.03056477390168766 KLELSDNR Unmodified 973.51926 0.51925868 1493 A0A384P5U2;P39687;H0YN26;Q6PKH8;Q08AJ6;Q3KPI8;Q1AHP8 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes no 0 0 1 6 0.707 1 2 1 39.248 39.331 2;3 0.012398 8960 20230619_1887_Aki_TMTPro18x_K_F7 73.067 34.774 871830 640440 828010 822980 950040 949140 967720 936420 1253400 888640 942960 972620 972620 836090 863930 959590 1147100 937380 805310 588090 846470 817880 977380 950090 983200 956310 1247300 903950 983470 978980 987100 873340 896450 960910 1093300 891340 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 5451200000 14615 1493 13834 27947;27948;27949;27950 22424;22425 22425 2 9606 Homo sapiens 0.03143981920800343 KLELSENR Unmodified 987.53491 0.53490874 3990 Q53F35;Q92688-2;Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes no 0 0 1 6.5 1.12 1 1 1 1 39.178 39.235 3 0.041184 9142 20230619_1885_Aki_TMTPro18x_K_F5 60.298 31.227 338330 247770 306380 325020 401170 396890 383750 391210 490720 341420 374770 340130 361190 293250 330160 375540 421480 327820 312390 227570 315380 322810 408610 395800 391110 398630 488790 347960 389100 344030 367660 308380 341520 373290 401730 312210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5169200000 14616 3990 13835 27951;27952;27953;27954 22426 22426 1 9606 Homo sapiens 0.040642684378553895 KLELSHEYK Unmodified 1145.6081 0.60807369 1347 A0A2R8Y4P3;A0A2R8Y840;Q9HCK8;Q9HCK8-2;H0YJG4 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes no 0 0 1 7.5 0.5 1 1 41.499 41.533 4 0.00048184 10111 20230619_1888_Aki_TMTPro18x_K_F8 109.6 74.185 48858 35957 50313 47625 46944 57696 51373 52869 61926 58031 69691 68654 69515 60234 55680 73335 70758 64408 45160 33027 50927 47272 49202 57444 51895 54477 62772 58707 71101 68961 70311 63073 57791 72940 67511 61293 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75567000 14617 1347 13836 27955;27956 22427 22427 1 9606 Homo sapiens 0.041093971604595936 KLEMDLK Unmodified 875.47864 0.47863942 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 1 7.5 0.5 1 1 48.56 48.637 3 0.069829 12926 20230619_1887_Aki_TMTPro18x_K_F7 55.567 5.7539 236080 187850 207880 206140 247230 271030 266710 289170 331340 322070 315290 317030 391530 293870 298990 393300 353950 312840 218040 172170 214120 207660 254350 269600 269780 294830 333390 323580 327500 321430 392560 309210 309190 388870 337840 298140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 911750000 14618 148 13837 27957;27958 22428 22428 1 9606 Homo sapiens 0.035919242768159165 KLENCNYAVELGK Unmodified 1536.7606 0.76062794 776 B4DI60;B3KUI1;B4DPU6;B4DG31;Q96HI1;Q59GX5;B4DPW9;V9HWJ7;Q53FI1;A0A024RDT4;Q53GY0;P13797-3;P13797-2;P13796;P13797 HEL-S-37;LCP1;PLS3 Plastin-3;Plastin-2 yes no 0 0 1 7.5 0.5 1 1 48.888 48.964 3 0.00036421 13074 20230619_1888_Aki_TMTPro18x_K_F8 94.461 0 168990 148260 167620 153790 134650 148470 135620 130360 128000 209520 201610 186000 235150 176920 165540 275600 237970 229030 156320 135770 169760 154910 142470 150240 136640 136580 134170 206670 204680 189760 235500 188080 174160 272400 226920 218060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138690000 14619 776 13838 27959;27960 22429;22430 22429 2 9606 Homo sapiens 0.013718047749080142 KLENEVEQR Unmodified 1143.5884 0.58840088 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 3 0.816 1 1 1 37.573 37.625 3 0.0046981 8625 20230619_1882_Aki_TMTPro18x_K_F3 77.288 46.63 148020 90190 119910 139980 171700 179110 151530 157120 211790 173680 184880 187840 203310 171600 153630 180480 215930 189780 136440 83068 125030 137680 173810 177600 155770 162440 211220 175190 191700 189470 204610 178030 160670 181690 205810 180250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 282170000 14620 3440 13839 27961;27962;27963 22431 22431 1 9606 Homo sapiens 0.022350211497041528 KLEQCNTELK Unmodified 1261.6336 0.63363651 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 1 6.5 0.5 1 1 41.769 41.852 3 0.00045881 10278 20230619_1886_Aki_TMTPro18x_K_F6 107.79 77.238 155970 123620 151180 140690 167970 176030 182030 152820 177120 185950 187210 157850 190930 127870 154660 121640 138870 91207 144160 113350 154170 141190 173400 174850 182520 158650 181200 185290 191540 160430 192720 132700 156830 120810 132700 87126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187020000 14621 4191 13840 27964;27965 22432 22432 1 9606 Homo sapiens 0.013285036205616052 KLERPPETPTVDPTVK Unmodified 1805.9887 0.98871362 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 2 7.5 0.5 1 1 44.317 44.367 4 7.3177E-08 11042 20230619_1887_Aki_TMTPro18x_K_F7 127.3 106.63 142260 130380 164680 162270 161920 187100 188100 160860 162320 171380 173860 124340 156520 104800 201480 110840 95361 71807 131810 119590 165400 161590 169000 186690 187340 166490 167330 171190 176880 127750 162070 109180 197720 109440 92104 68702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 344650000 14622 1005 13841 27966;27967 22433 22433 1 9606 Homo sapiens 0.11795880903559919 KLEVEANNAFDQYR Unmodified 1695.8216 0.82164829 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;B1AK85;A0A6I8PRV6 CAPZB F-actin-capping protein subunit beta yes no 0 0 1 6 0.816 1 1 1 51.24 51.316 3 2.3076E-12 14288 20230619_1885_Aki_TMTPro18x_K_F5 190.87 165.7 661730 520060 584400 705000 535660 629430 601860 656370 650060 901550 882270 951090 955280 681410 921300 871310 837670 881850 611140 477690 600060 695580 562540 642710 605040 675280 669960 898720 898060 953500 969820 722420 932550 873340 802590 837310 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3204199999.9999995 14623 1434 13842 27968;27969;27970 22434;22435 22434 2 9606 Homo sapiens 0.0015703307867624972 KLFEELVR Unmodified 1032.5968 0.59678072 370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;Q504U3 PKM2;PKM Pyruvate kinase;Pyruvate kinase PKM yes no 0 0 1 1.5 0.5 1 1 54.393 54.405 3 0.022538 16135 20230619_1880_Aki_TMTPro18x_K_F1 70.552 50.411 166690 154950 157440 196300 193600 192200 239590 242080 191440 235560 223760 183020 198250 145880 264150 152350 136960 104080 154190 142140 161510 194800 199120 195850 237400 243620 199230 236580 226860 186900 205910 152120 259800 150730 132040 99487 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69329000 14624 370 13843 27971;27972 22436 22436 1 9606 Homo sapiens 0.08178619856994374 KLFGQESGPSAEK Unmodified 1376.6936 0.69359423 4456 Q9BWH2;H7C0K8 FUNDC2 FUN14 domain-containing protein 2 yes no 0 0 1 8 0 1 45.138 45.166 3 4.4822E-06 11543 20230619_1888_Aki_TMTPro18x_K_F8 130.61 102.7 96900 82837 98847 108020 123970 120710 140320 132200 104090 109590 122440 75498 89970 54055 134420 45517 47724 23086 89641 76032 100690 107190 126950 121380 139400 133640 108820 110840 123140 77521 94671 56112 130620 44950 46330 22255 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99501000 14625 4456 13844 27973 22437 22437 1 9606 Homo sapiens 0.020315175554515008 KLFVGGIKEDTEEHHLR Unmodified 2007.0538 0.05377349 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28;A0A087WUI2;I6L957;A0A7I2V4N0;A0A7I2YQN4 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 2 7.5 0.5 1 1 44.428 44.478 6 0.0034457 11231 20230619_1888_Aki_TMTPro18x_K_F8 69.111 0 127280 108970 124610 105760 135630 136230 171800 145990 147870 163670 162200 144820 158530 113980 201950 132000 145650 148240 117710 99742 126880 107620 140760 135770 170320 148930 152640 163810 165600 146800 163750 119690 201100 133490 139920 140620 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 259260000 14626 3491 13845 27974;27975 22438 22438 1 9606 Homo sapiens 0.0905287542948372 KLFVGGLK Unmodified 860.54837 0.54837396 3836 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 1 5 0 1 49.654 49.731 3 0.0033794 13632 20230619_1885_Aki_TMTPro18x_K_F5 89.355 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14627 3836 13846 27976 22439 22439 1 9606 Homo sapiens 0.11252171007754441 KLGEMWNNLNDSEK Oxidation (M) 1692.7777 0.77773456 3240 O15347;E9PES6;E7ES08;E7EQU1 HMGB3 High mobility group protein B3 yes no 0 1 1 6.5 0.5 1 1 48.67 48.752 3 0.024833 13356 20230619_1886_Aki_TMTPro18x_K_F6 74.296 64.239 217200 188490 197700 233800 262950 249010 243110 234230 273600 264690 284980 285720 261080 217590 259350 300280 301110 282340 200770 172900 203600 232540 267170 250440 247190 241190 277490 266500 290840 286840 267150 231040 266290 299300 287560 268430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115490000 14628 3240 13847 27977;27978 22440 22440 1908 1 9606 Homo sapiens -0.04094319409932723 KLGEMWNNLNDSEK Unmodified 1676.7828 0.78281994 3240 O15347;E9PES6;E7ES08;E7EQU1 HMGB3 High mobility group protein B3 yes no 0 0 1 7.33 0.471 2 1 55.38 55.442 3;4 1.321E-06 15911 20230619_1887_Aki_TMTPro18x_K_F7 122.33 101.95 257730 219080 256960 249310 227700 306760 272210 289680 316380 317500 310600 321990 325440 279680 309170 323240 323210 334460 238370 200820 260680 250150 240510 305340 273370 297750 319660 319510 319700 325170 330920 292210 315530 324740 309190 317510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 689850000 14629 3240 13847 27979;27980;27981 22441;22442 22441 2 9606 Homo sapiens -0.028500155473011546 KLGEMWNNTAADDK Unmodified 1591.7301 0.73005609 772 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;A0A286R9D9;B3KQ05;B2RPK0;D3DQY9 HMGB1;HMGB1P1;hCG_1991922 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 0 0 1 6.5 0.5 1 1 50.667 50.746 3 0.0016428 13923 20230619_1887_Aki_TMTPro18x_K_F7 73.834 62.22 226500 179750 200170 232520 183350 262490 206190 206880 363110 251440 238640 305840 349760 305270 188800 430560 413590 505290 209200 165020 205530 230770 193270 261710 211330 216460 355850 253790 255750 308120 346200 321620 208580 433970 394180 478800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 378210000 14630 772 13848 27982;27983 22443 22443 1 9606 Homo sapiens -0.042139736101262315 KLGEMWNNTAADDKQPYEK Unmodified 2237.0423 0.042282105 772 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;A0A286R9D9;B3KQ05;D3DQY9 HMGB1;hCG_1991922 High mobility group protein B1 yes no 0 0 2 7 0 1 51.007 51.085 4 5.0122E-11 14046 20230619_1887_Aki_TMTPro18x_K_F7 143.93 125.39 427320 358060 421580 399460 386900 495640 497470 503870 430820 582930 529790 446590 525960 406440 543630 399610 398160 315910 395150 328160 428230 401520 407850 493980 493320 516010 447320 580340 538370 458020 537150 420410 543630 397640 381790 301240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 605420000 14631 772 13849 27984 22444 22444 1 9606 Homo sapiens -0.026757344468023803 KLGEMWSEQSAK Oxidation (M) 1408.6657 0.66566492 4068;3509 Q5U071;P26583 HMGB2 High mobility group protein B2 no no 0 1 1 7.4 0.8 1 1 3 44.921 44.989 3 0.0061003 11985 20230619_1888_Aki_TMTPro18x_K_F8 64.945 50.687 423300 337990 391990 403130 396350 398560 454640 461490 448290 437900 513190 469170 444030 391420 497630 430170 466100 436930 391110 310020 400900 401890 412550 404960 454980 466480 459470 444620 520320 472390 457910 408300 502960 432330 446060 415040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2255700000 14632 4068;3509 13850 27985;27986;27987;27988;27989 22445;22446;22447 22447 2173 3 9606 Homo sapiens -0.022321286962778686 KLGEWVGLCK Unmodified 1188.6325 0.6325143 3501 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 1 4 0.816 1 1 1 55.451 55.49 3 0.00049061 16558 20230619_1882_Aki_TMTPro18x_K_F3 95.401 73.355 640690 562250 572860 598380 568250 702380 633900 709670 513570 910350 405250 729630 403730 878830 287660 1149100 270370 626990 592180 515010 587740 603020 592750 702570 631980 729310 528450 903120 423070 753120 410360 912670 298700 1118800 261320 599740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3306799999.9999995 14633 3501 13851 27990;27991;27992 22448 22448 1 9606 Homo sapiens 0.045743340423314294 KLGGSLADSYLDEGFLLDK Unmodified 2040.0415 0.041537049 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 1 7 0 1 62.528 62.564 3 1.1492E-07 18970 20230619_1887_Aki_TMTPro18x_K_F7 116.21 92.415 202410 153980 185170 186660 163690 197940 180300 161560 189490 245490 255440 236850 239750 211260 197000 261130 243370 243340 186950 141290 189220 185980 172350 198470 181210 169890 195360 243290 258110 240010 243210 221350 204000 260440 232400 231310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1138800000 14634 3756 13852 27993 22449 22449 1 9606 Homo sapiens 0.06311794175712748 KLGGSQEDQIK Unmodified 1201.6303 0.63026569 1232 A0A140VK56;P37837-2;P37837;F2Z393;B4DID5 TALDO1 Transaldolase yes no 0 0 1 6.5 0.5 1 1 40.83 40.91 3 0.00036511 9644 20230619_1887_Aki_TMTPro18x_K_F7 101.38 57.752 213790 158260 217140 221190 267650 272240 273060 264160 297550 265990 310840 307230 298120 232720 282910 209740 322540 267380 197590 145450 221080 218840 273950 271220 275740 270460 302140 269980 317720 307320 303810 241460 289680 214650 307840 253550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 466820000 14635 1232 13853 27994;27995 22450 22450 1 9606 Homo sapiens 0.037515768382036185 KLGNNCVFAPADVTSEK Unmodified 1848.904 0.90399771 1085 A0A0S2Z410;Q99714;A0A804HHW5;Q99714-2;Q5H928;A0A0S2Z434 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 1 8 0 1 50.933 51.01 4 0.00033174 13938 20230619_1888_Aki_TMTPro18x_K_F8 82.248 62.925 163600 129330 150630 162890 168250 153940 172270 184960 187200 192840 181690 172690 201120 158350 182580 185670 168710 158300 151140 118690 154390 161670 173250 157140 173970 186980 189770 193800 187480 175750 203640 165300 185240 184640 161480 150690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 340260000 14636 1085 13854 27996 22451 22451 1 9606 Homo sapiens 0.01350187095340516 KLGSSLDWDR Unmodified 1175.5935 0.59348625 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;P26640-2 VARS Valine--tRNA ligase yes no 0 0 1 7.5 0.5 1 1 47.751 47.824 3 0.0016944 12613 20230619_1888_Aki_TMTPro18x_K_F8 89.9 62.786 329740 267430 289290 285250 257390 331650 327890 326480 346250 375710 342930 313590 397230 309790 368390 413530 387100 344310 304580 245030 296800 287390 272220 331710 327150 335110 351830 375150 354250 321240 402140 325260 376370 409910 369890 327920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 321350000 14637 725 13855 27997;27998 22452 22452 1 9606 Homo sapiens 0.012713250123169928 KLGTVITPDTWK Unmodified 1357.7606 0.76055158 4637 Q9P021 CRIPT Cysteine-rich PDZ-binding protein yes yes 0 0 1 3 0 1 54.897 54.943 3 0.0013624 16271 20230619_1882_Aki_TMTPro18x_K_F3 86.498 69.472 79386 70822 80194 77510 80044 88796 85052 82189 98800 78189 71102 53960 69220 52049 73631 71367 66059 53921 73454 64883 81377 77914 83302 88806 85887 84307 98733 78547 74075 55881 70871 54804 74362 70446 63194 51444 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51278000 14638 4637 13856 27999 22453 22453 1 9606 Homo sapiens 0.09598172837195307 KLHEEELR Unmodified 1052.5615 0.56145784 2433 B3KWQ6;P41219;P41219-2;F8W835 PRPH Peripherin yes no 0 0 1 3 0.816 1 1 1 33.285 33.346 4 6.4057E-05 6883 20230619_1882_Aki_TMTPro18x_K_F3 171.36 129.38 839290 274360 666720 798110 730290 736200 762830 766280 1132300 1045300 1331000 1584700 1330600 1324400 1096500 1340700 1504800 1469800 771840 256580 693240 761010 755000 749070 778770 788690 1139900 1058100 1357500 1574600 1348500 1374300 1143000 1353700 1435500 1394800 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1337500000 14639 2433 13857 28000;28001;28002 22454;22455;22456;22457;22458 22456 5 9606 Homo sapiens 0.0372795732916984 KLIAAQTGTR Unmodified 1057.6244 0.62439245 436 B2R4N3;A0A024R7B0;Q9BZL1 UBL5 Ubiquitin-like protein 5 yes no 0 0 1 5 0 1 37.725 37.818 3 0.003949 8597 20230619_1885_Aki_TMTPro18x_K_F5 73.951 39.419 167450 147630 158910 144570 204830 220240 188870 187580 265580 110560 103010 70646 93176 71237 91494 97905 97877 49041 154850 135130 162740 147360 208810 216280 193580 191740 259270 115000 112680 73739 95366 74867 93438 95232 93248 47276 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174550000 14640 436 13858 28003 22459 22459 1 9606 Homo sapiens 0.09788523117231307 KLIEYYK Unmodified 955.53787 0.53786886 2030 A8K3S1;P46926;D6RAY7;P46926-2;D6R9P4;D6RFF8;D6R917;D6RB13 GNPDA1 Glucosamine-6-phosphate isomerase;Glucosamine-6-phosphate isomerase 1 yes no 0 0 1 2 0 1 49.162 49.227 3 0.0064336 14079 20230619_1881_Aki_TMTPro18x_K_F2 89.698 52.222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14641 2030 13859 28004 22460 22460 1 9606 Homo sapiens 0.05832143562656711 KLIHLEIKPAIR Unmodified 1429.9133 0.91330425 1774;3554 A0A8I5KVF6;A0A8I5QJL9;A0A8I5QJ96;A0A8I5KYS7;B4DFY5;A4QPA9;A0A8I5KYB4;Q02750-2;Q02750;A0A8I5KRX5;A0A8I5QJC1;A0A8I5QJP8;P36507;Q7Z370 MAP2K1;MAP2K2;DKFZp686L02273 Dual specificity mitogen-activated protein kinase kinase 1;Dual specificity mitogen-activated protein kinase kinase 2 no no 0 0 2 6 0 1 47.458 47.539 5 1.9614E-05 12810 20230619_1886_Aki_TMTPro18x_K_F6 135.58 129.61 164290 172660 177280 185090 145590 152180 189070 146250 133570 181100 181310 106180 128010 86214 207620 72556 73852 48128 152280 158070 178570 185550 154610 156380 186430 150930 141240 178760 181130 110540 135740 89010 201590 72253 71776 46066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 655350000 14642 1774;3554 13860 28005 22461 22461 1 9606 Homo sapiens 0.21554413024500718 KLILDSAR Unmodified 914.55492 0.5549159 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8;B4DVU1 HEL107;TKT Transketolase yes no 0 0 1 2 0.816 1 1 1 43.23 43.279 3 0.0029285 11337 20230619_1881_Aki_TMTPro18x_K_F2 103.19 56.803 411790 367260 380760 404200 477740 568000 498490 472520 707920 233780 257820 247540 217590 225390 275340 318590 340330 227380 380740 336480 391080 407340 489870 559640 507330 482970 689730 250550 283960 250400 226740 237790 282750 313460 324220 217350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200380000 14643 3523 13861 28006;28007;28008 22462 22462 1 9606 Homo sapiens 0.09422064168472843 KLITDEFVK Unmodified 1091.6227 0.62266112 599 Q9UNF1;A0A024R9Y7;Q5H907;Q5H909;Q9UNF1-2;B4DX55;Q12816-2;B4DK08;B4DS47;A0A024R9X0;Q9BX90;G5E9N2;Q12816-4;Q12816-3;Q9BX91;Q9NVY3;Q12816-5;Q9BX89;Q9BX88;A0A087X070;Q12816 MAGED2;TRO Melanoma-associated antigen D2;Trophinin yes no 0 0 1 8 0 1 52.735 52.809 3 0.086446 14759 20230619_1888_Aki_TMTPro18x_K_F8 38.161 15.686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14644 599 13862 28009 22463 22463 1 9606 Homo sapiens 0.08051469308611559 KLIYFQLHR Unmodified 1216.7081 0.7080625 2263 B2R8R5;Q13263;Q13263-2 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 1 8 0 1 48.593 48.66 4 3.3469E-05 13000 20230619_1888_Aki_TMTPro18x_K_F8 157.91 128.95 19960 25543 18920 13830 28004 50424 25940 23141 76947 11401 11448 8386.4 19026 9581.8 13482 15790 17191 12043 18513 23271 19440 15430 28586 47561 27761 25185 72669 12248 15110 8727.8 18908 10201 14021 15550 16377 11497 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63885000 14645 2263 13863 28010 22464 22464 1 9606 Homo sapiens 0.10837679284918522 KLLADQAEAR Unmodified 1113.6142 0.6142217 1679 J3QR09;J3KTE4;Q53G49;A0A7I2YQG2;P84098;Q8IWR8 RPL19 Ribosomal protein L19;60S ribosomal protein L19 yes no 0 0 1 6 0.816 1 1 1 39.617 39.698 3 0.0021366 9120 20230619_1887_Aki_TMTPro18x_K_F7 86.772 53.826 197460 196810 218440 203290 260850 246280 259240 257540 173140 193200 203060 121430 143880 99304 187270 73794 189970 45784 182990 180150 220670 205510 266890 246220 258920 260520 182560 196350 203940 125890 150590 101950 189120 73436 180740 44312 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 900740000 14646 1679 13864 28011;28012;28013 22465 22465 1 9606 Homo sapiens 0.061959153919815435 KLLAEVTLK Unmodified 1013.6485 0.64848194 4109 Q6IBR2;Q9Y285;K7ER00;K7ER16;K7EPH2 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 1 3 0 1 54.99 55.037 3 0.08045 16359 20230619_1882_Aki_TMTPro18x_K_F3 40.015 6.7866 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14647 4109 13865 28014 22466 22466 1 9606 Homo sapiens 0.1422036355089631 KLLDFCK Unmodified 922.49462 0.49462383 3794 Q04828;H0Y804;B4DK69;P52895;Q59GU2 AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C2 yes no 0 0 1 3 0 1 51.845 51.91 3 0.081292 15017 20230619_1882_Aki_TMTPro18x_K_F3 51.066 32.663 88805 88815 101940 110820 196600 256840 381320 316620 378330 93738 98327 94802 99304 84341 113700 97726 97139 99222 82330 81439 104290 112080 201730 249720 372840 313250 373260 107150 114200 96064 102130 88059 114360 98135 93117 94218 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39595000 14648 3794 13866 28015 22467 22467 1 9606 Homo sapiens 0.030276305137249437 KLLDIVAR Unmodified 926.5913 0.59130141 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 1 3.5 0.5 1 1 51.481 51.527 3 0.0013741 14668 20230619_1883_Aki_TMTPro18x_K_F4 103.55 17.871 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14649 1211 13867 28016;28017 22468;22469 22469 2 9606 Homo sapiens 0.1250694106516903 KLLDLVQQSCNYK Unmodified 1607.8341 0.83412723 1527 A0A3B3IUA2;Q6FHM6;B1AHD1;P55769 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 0 0 1 4 0 1 58.339 58.342 4 0.0001368 17657 20230619_1883_Aki_TMTPro18x_K_F4 101.53 86.56 47070 47937 58813 53638 60757 59921 64946 60413 67781 49306 47809 37668 45662 32329 61254 40044 39495 40431 43681 43907 58761 53818 62967 60159 65319 61392 68048 50098 49873 38619 47349 33979 60695 40208 38005 38394 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77688000 14650 1527 13868 28018 22470 22470 1 9606 Homo sapiens 0.054523532173789135 KLLEATELK Unmodified 1043.6227 0.62266112 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 8 0 1 51.333 51.41 3 0.0035157 14122 20230619_1888_Aki_TMTPro18x_K_F8 81.017 42.449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14651 1022;3868 13869 28019 22471 22471 1 9606 Homo sapiens 0.1025946930860755 KLLEGEEER Unmodified 1101.5666 0.5666028 1428;3482;1473 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;B4DFR3;P20700;E9PBF6;B4DZT3;Q03252;A0A384NPH0;A0A0A7M1X5 LMNA;LMNB1;LMNB2 Prelamin-A/C;Lamin-A/C;Lamin-B1;Lamin-B2 no no 0 0 1 2.5 0.5 1 1 39.717 39.78 3 0.0053323 9511 20230619_1882_Aki_TMTPro18x_K_F3 73.781 58.809 92535 100730 102140 95463 143310 104790 143940 109360 86418 87724 108400 65837 78768 52149 167930 53497 62847 52792 85815 92116 103500 97072 144980 105580 143250 110910 92163 89102 108820 67479 85325 54410 162760 54079 61078 50186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179820000 14652 1428;3482;1473 13870 28020;28021 22472 22472 1 9606 Homo sapiens 0.01988216401127829 KLLEGEESR Unmodified 1059.556 0.55603812 3414;2433 B3KWQ6;P41219;P41219-2;H7C5W5;Q96GE1;Q7L4M3;P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5;Q45VM7;P17661;L7RDA5;Q45VM8;Q45VM6;A5Z217;A0A384NPX1;Q53SB5 PRPH;VIM;HEL113;DES;tmp_locus_29 Peripherin;Vimentin;Desmin no no 0 0 1 3.5 0.957 1 2 2 1 39.127 39.185 2;3 0.0012007 9260 20230619_1882_Aki_TMTPro18x_K_F3 80.986 54.392 1246800 1095500 1224700 1066000 3130900 2657600 2267700 2111100 1990800 1950600 2348500 1492500 1472000 1076900 2460000 905930 1053300 586880 1153300 1002700 1273200 1100300 3070600 2556300 2326500 2187900 2058400 1965900 2350500 1522900 1573600 1116200 2397800 901000 1018200 562510 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3309299999.9999995 14653 2433;3414 13871 28022;28023;28024;28025;28026;28027 22473;22474;22475;22476 22474 4 9606 Homo sapiens 0.028642337467317702 KLLMMAGIDDCYTSAR Unmodified 1843.8631 0.86306087 3457 P15880;Q6IPX5;Q3KQT6;Q8N5L9;H0YEN5;Q8J014;E9PM36;I3L404;E9PQD7;Q9BSW5 RPS2;rps2 40S ribosomal protein S2 yes no 0 0 1 3 0 1 58.818 58.847 3 0.00057403 17915 20230619_1882_Aki_TMTPro18x_K_F3 78.597 68.258 51663 57545 68053 63322 60324 51715 71397 55889 35131 60154 61416 34815 34717 27179 83664 27386 26606 25820 48005 52686 67610 63369 63298 53344 70257 56980 38965 59716 60543 36265 38503 28334 80757 27618 26002 24543 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77022000 14654 3457 13872 28028 22477 22477 1 9606 Homo sapiens -0.02511613540127655 KLLTEEGQK Unmodified 1044.5815 0.58152458 2648 B7ZB41;B4E290;Q6NUK1-2;Q6NUK1 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes no 0 0 1 7 0 1 42.561 42.636 3 0.00097111 10332 20230619_1887_Aki_TMTPro18x_K_F7 94.363 43.454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14655 2648 13873 28029 22478 22478 1 9606 Homo sapiens 0.061017082691250835 KLMFTMQVK Oxidation (M) 1140.6035 0.60352235 4799 yes yes 0 1 1 2.33 0.471 2 1 44.837 44.916 4 0.092962 12095 20230619_1881_Aki_TMTPro18x_K_F2 48.64 21.304 + 571370 277670 439980 539870 474150 526540 542720 493670 613700 519780 496540 488860 641690 517380 480030 603670 532740 511240 525980 256880 459000 522900 492050 532260 545210 507590 616490 523320 521160 498880 642490 537350 494540 599790 509060 486640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7172399999.999999 14656 4799 13874 28030;28031;28032 22479 22479 2916 1 9606 Homo sapiens 0.0388447342170366 KLMHQAALLGQALQDSR Unmodified 1879.0098 0.0098001854 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7;E9PKD3;A0A0B4J225;E9PIZ5 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 1 5 0 1 54.716 54.783 4 2.4329E-09 15759 20230619_1885_Aki_TMTPro18x_K_F5 136.35 124.21 60323 50671 61001 66500 59416 69159 65255 59134 65071 69038 61146 62385 57724 48055 65376 51504 59333 50437 55793 46514 61923 65873 62009 69492 65457 61400 66192 69030 62809 63088 59370 50236 65929 51699 56767 47950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 563690000 14657 682 13875 28033 22480 22480 1 9606 Homo sapiens 0.10545567731469419 KLNEQSPTR Unmodified 1071.5673 0.5672715 3304 O75396;I1VE16 SEC22B Vesicle-trafficking protein SEC22b yes no 0 0 1 7.5 0.5 1 1 32.418 32.464 3 0.014741 6486 20230619_1888_Aki_TMTPro18x_K_F8 68.069 47.642 45526 35236 94754 68944 153660 117290 107070 106790 62973 45300 75079 50245 39317 32479 140170 13593 33449 25912 42459 32525 92829 67478 153020 114750 109340 108130 67087 49202 74955 50250 45915 33109 134160 15077 32984 24509 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71250000 14658 3304 13876 28034;28035 22481;22482 22482 2 9606 Homo sapiens 0.034350558408505094 KLNEQVTQEQPLK Unmodified 1553.8413 0.8413211 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 1 7 0 1 44.681 44.767 3 0.0015983 11239 20230619_1887_Aki_TMTPro18x_K_F7 80.379 55.325 91956 70437 76489 87591 101920 114460 103570 98189 113600 108510 125080 117560 125720 96613 107510 122420 118180 99236 84877 64646 79448 87374 103950 113320 104620 101710 115600 109400 127750 118270 127350 101710 110310 121290 112840 94570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111160000 14659 1532 13877 28036 22483 22483 1 9606 Homo sapiens 0.08655409089465138 KLNIGGK Unmodified 728.45447 0.45447358 658 Q9UL25;A0A024RBA9;Q96GX3 RAB21 Ras-related protein Rab-21 yes no 0 0 1 4 0 1 42.645 42.688 3 0.020323 10701 20230619_1883_Aki_TMTPro18x_K_F4 70.594 25.956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14660 658 13878 28037 22484 22484 1 9606 Homo sapiens 0.07938451905476995 KLNSPEETAFQTPK Unmodified 1588.8097 0.80968662 2632 B4DZG6;Q9BTX1-6;Q9BTX1-5;Q9BTX1-2;Q9BTX1;Q9BTX1-4 NDC1 Nucleoporin NDC1 yes no 0 0 1 7 0 1 46.846 46.934 3 5.3993E-05 12184 20230619_1887_Aki_TMTPro18x_K_F7 101.3 81.564 39660 33827 36693 41905 38328 41120 41435 40408 44587 48138 48804 48800 51029 39632 48071 49715 50527 47469 36659 31031 37575 41643 39762 41632 41704 41548 45438 48244 49976 49196 51841 41731 49077 49671 48299 45121 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51065000 14661 2632 13879 28038 22485 22485 1 9606 Homo sapiens 0.038834163354977136 KLNVTEQEK Unmodified 1087.5873 0.58733824 293;3183 A0A024R4F1;P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879;A4UCS8;A0A2R8Y6I8;L0R849 ENO1;EDARADD Alpha-enolase;Enolase no no 0 0 1 6.5 0.957 1 2 2 1 40.702 40.769 3;4 0.0001373 9536 20230619_1887_Aki_TMTPro18x_K_F7 136.49 85.27 1130500 547830 1294400 1284700 1780000 1739900 1458600 1641900 1534400 1359800 2090100 2667600 1242300 2220700 1265100 834690 1982800 1683500 1044000 508460 1308200 1241500 1799500 1721500 1492700 1676400 1579100 1429100 2084900 2629100 1304200 2226800 1323100 911200 1888100 1591100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 26819000000 14662 293;3183 13880 28039;28040;28041;28042;28043;28044 22486;22487;22488 22487 3 9606 Homo sapiens 0.04704806780796389 KLPDIFQSYDR Unmodified 1380.7038 0.70376498 2593 E7ER68;B4DUD8;Q658Y4;P0C866 FAM91A1;LINC00869 Protein FAM91A1;Putative uncharacterized protein encoded by LINC00869 yes no 0 0 1 1.5 0.5 1 1 56.021 56.03 3 0.0024174 17025 20230619_1881_Aki_TMTPro18x_K_F2 80.287 9.7988 136350 118180 136640 140220 115790 140060 133910 133250 162100 152140 143980 124550 154460 123590 156930 158780 146560 154400 126130 108360 138490 139820 122540 141480 134880 137120 162830 151950 148930 127750 157370 129450 158980 158740 140380 146660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104700000 14663 2593 13881 28045;28046 22489;22490 22490 2 9606 Homo sapiens 0.0286412528071196 KLPDLER Unmodified 869.49707 0.49706667 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 1 6.5 0.5 1 1 42.429 42.514 3 0.079857 10294 20230619_1887_Aki_TMTPro18x_K_F7 51.63 0 221200 143600 154590 178420 160510 207080 197280 191100 278200 217520 237530 230740 248200 209700 185150 279340 284550 242580 203770 131890 162860 177680 167800 206780 199190 197040 276980 219000 245930 233090 250100 220620 195370 277250 271000 230940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313000000 14664 1853 13882 28047;28048 22491 22491 1 9606 Homo sapiens 0.05709802243052309 KLPEEEAECYFHSR Unmodified 1793.8043 0.80428367 3146 J3QQZ9;V9HW45;Q53FP0;Q9NVS9-3;Q9NVS9;J3QQV6 PNPO;HEL-S-302 Pyridoxine-5'-phosphate oxidase yes no 0 0 1 4.5 0.5 1 1 47.065 47.125 4 0.0091442 12711 20230619_1883_Aki_TMTPro18x_K_F4 68.481 58.823 36403 24320 41129 40743 41660 46272 46281 39818 46570 57694 80438 103940 89303 77667 73597 60278 97408 110210 33659 22412 41397 39845 43332 46204 46426 41649 48790 58728 81472 102390 90125 80099 76350 63693 93058 104100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46110000 14665 3146 13883 28049;28050 22492 22492 1 9606 Homo sapiens -0.0608663051862095 KLPEEEVESSR Unmodified 1301.6463 0.64630969 1588 Q15154;Q15154-5;H0YBA1;D3DSQ0;A0A5H1ZRS1;B9EIS5;A2RUU9;Q15154-2;Q15154-4;A0A4W8VX11;B4DJ00 PCM1 Pericentriolar material 1 protein yes no 0 0 1 2.5 0.5 1 1 39.225 39.285 3 0.000365 9469 20230619_1881_Aki_TMTPro18x_K_F2 101.39 68.389 502840 337510 392050 542910 527970 589090 516830 471550 623590 519580 639900 635240 579330 533420 539250 615730 715030 638970 463590 310850 410450 531360 537840 589220 524850 491500 629410 526390 653030 636340 591750 557690 559140 618550 681910 606930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 206220000 14666 1588 13884 28051;28052 22493;22494 22493 2 9606 Homo sapiens 0.007552382844778549 KLPEELGR Unmodified 940.53418 0.53418046 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 1 6.5 0.5 1 1 41.566 41.649 3 0.0068581 10193 20230619_1886_Aki_TMTPro18x_K_F6 88.177 62.058 755910 534520 677280 721000 809450 1028100 972520 940000 1260900 1061100 1106400 1243900 1224800 1070100 954490 1364600 1196700 1313000 697770 491160 697180 716640 836360 1013700 979450 969380 1261500 1072000 1148200 1248600 1233900 1124700 991050 1362400 1143400 1247200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 854180000 14667 2337;3778;3779 13885 28053;28054 22495;22496;22497 22496 3 9606 Homo sapiens 0.06153473788822339 KLPEEVVK Unmodified 940.55933 0.55933258 3312 O75643;A4FU77;A0A494C1A5 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 1 7 0 1 45.153 45.238 3 0.0035008 11404 20230619_1887_Aki_TMTPro18x_K_F7 88.496 38.372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14668 3312 13886 28055 22498 22498 1 9606 Homo sapiens 0.08667528591388418 KLPEYNPR Unmodified 1015.5451 0.5450795 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 1 3.67 3.09 1 1 1 39.549 39.568 3 0.011152 9319 20230619_1888_Aki_TMTPro18x_K_F8 76.465 47.378 1584200 1283300 1486000 1465200 1612600 1586600 1538600 1552600 1779800 1536100 1604900 1405300 1627600 1314800 1539000 1821500 1893100 1397300 1464000 1176600 1519100 1467000 1662000 1595300 1563500 1588000 1792200 1549800 1654500 1431100 1656300 1385800 1587400 1797800 1804400 1333400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1383000000 14669 617 13887 28056;28057;28058 22499;22500;22501 22501 3 9606 Homo sapiens 0.03792876163083747 KLPHPDLPAEEK Unmodified 1372.7351 0.73506511 2722 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;Q53GS9-3;Q53GS9-2;B3KPG7;B3KMG1 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 0 0 1 5.5 0.5 1 1 43.748 43.834 4 5.2954E-05 11163 20230619_1886_Aki_TMTPro18x_K_F6 119.25 75.625 168350 126620 147480 150820 160910 185080 166980 153490 193130 160560 182800 174400 189840 153060 160080 197620 182600 196180 155430 116170 151780 150770 166380 183830 168800 159220 194750 162410 188260 175810 192070 160980 164760 197680 174590 186300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204880000 14670 2722 13888 28059;28060 22502;22503 22503 2 9606 Homo sapiens 0.06360698314779256 KLPIGMK Unmodified 785.48333 0.48333086 1129 O00203;O00203-3;A0A0S2Z5J4;A8K586;A0A8Q3WKJ9;A0A8Q3WL34;A0A8Q3SIS1;A0A8Q3SHS3;A0A8Q3WKK0;A0A8Q3SHW6;A0A8Q3SHR2;A0A8Q3SI03;A0A8Q3WKN2;A0A8Q3SHS6;H0YBD0 AP3B1 AP-3 complex subunit beta-1;AP-3 complex subunit beta yes no 0 0 1 5 0 1 47.301 47.378 3 0.0903 12631 20230619_1885_Aki_TMTPro18x_K_F5 40.987 7.8665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14671 1129 13889 28061 22504 22504 1 9606 Homo sapiens 0.08200853210257719 KLPIVETLGCCNVICSDK Unmodified 2105.0319 0.031917115 2649 H0Y9V7;B4E295;B4E2Q0;P98194-2;P98194-4;P98194;P98194-3;P98194-5;P98194-8;P98194-9;P98194-6;P98194-7;H0Y8X9;Q59G44;D6R9U9 ATP2C1 Calcium-transporting ATPase;Calcium-transporting ATPase type 2C member 1 yes no 0 0 1 2 0 1 59.175 59.187 3 0.00026153 18339 20230619_1881_Aki_TMTPro18x_K_F2 76.713 68.113 13961 10830 13708 10885 10006 10441 9059.3 10924 12615 15742 16284 16147 16673 12665 14674 18548 13449 21412 12903 9919.6 13867 10998 10665 10613 9320.3 11251 12812 15655 16547 16259 16894 13503 14915 18688 12935 20277 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5356800 14672 2649 13890 28062 22505 22505 1 9606 Homo sapiens 0.02360243302746312 KLPLEVTTRPSTEEPVR Unmodified 1951.0738 0.07384023 4760 Q9Y6X9;Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 yes no 0 0 2 7.5 0.5 1 1 44.377 44.427 4 6.227199999999999E-19 11237 20230619_1888_Aki_TMTPro18x_K_F8 191.47 156.46 189560 168850 179670 204280 178920 243030 218210 200430 216990 213620 218690 194370 229560 196830 203970 254210 233970 248700 175300 154840 183560 203840 187280 241720 217680 208110 221210 214680 224620 198480 232770 206010 209810 254070 223670 236220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274880000 14673 4760 13891 28063;28064 22506 22506 1 9606 Homo sapiens 0.13634626369412217 KLPPLPVVEK Unmodified 1118.7063 0.70633117 478 Q9NUL3;Q4LE57;Q9NUL3-2;Q9NUL3-4;Q9NUL3-7;Q9NUL3-3;Q9NUL3-6;Q9NUL3-8;A0A024R7X7;Q2TBD5;E7EVJ4;E7EPX0;A8K276;E5RJN7;B7Z1P6;E7EVI1 STAU2;STAU2 variant protein Double-stranded RNA-binding protein Staufen homolog 2 yes no 0 0 1 3 0 1 54.021 54.073 3 0.00045756 15978 20230619_1882_Aki_TMTPro18x_K_F3 107.85 63.208 165430 140850 147850 168700 115250 167750 137830 135350 184000 178510 165380 185480 216100 184220 146500 253610 242750 254390 152870 129170 151320 168040 123350 168890 139140 141740 184180 178400 172820 188010 215770 193750 156100 253420 231410 241570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136420000 14674 478 13892 28065 22507 22507 1 9606 Homo sapiens 0.1517262547631617 KLPSQPTTDTSTDK Unmodified 1517.7573 0.7573167 3035 Q8NFC6;H0Y9Y2 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes no 0 0 1 7 0 1 40.65 40.717 3 0.0005906 9548 20230619_1887_Aki_TMTPro18x_K_F7 71.98 58.234 25162 15942 21942 26388 29360 29336 23976 26470 34408 30607 29593 34083 35485 29603 27143 35564 33812 34350 23209 14692 22688 25806 29770 29370 24812 27346 34283 30828 30866 34279 35637 30998 28161 35552 32290 32637 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24390000 14675 3035 13893 28066 22508 22508 1 9606 Homo sapiens 0.019148332018858127 KLQDVFEFR Unmodified 1180.6241 0.6240581 730 P25440-2;P25440;P25440-3;A0A0G2JK44;A0A140T9E9;H0Y6K2;A0A024RCR5;X5CF57;A0A1U9X7A8;P25440-4;A0A1U9X7B8;A0A1U9X7B4;A0A1U9X7B3;A0A140T9V2;A0A0G2JHL0;A0A140T9F7;U3KQA6 BRD2 Bromodomain-containing protein 2 yes no 0 0 1 1 0 1 55.464 55.464 3 0.05638 16631 20230619_1880_Aki_TMTPro18x_K_F1 47.844 25.014 57266 58578 61956 55693 47524 47414 47735 54890 51713 57717 63010 46707 54247 34939 80060 35354 29214 26054 53071 53579 62269 56449 50461 48807 48324 55622 52927 57805 63677 47525 56714 36497 77903 35162 28422 24856 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 355230000 14676 730 13894 28067 22509 22509 1 9606 Homo sapiens 0.04097103397361934 KLQDVFEMR Unmodified 1164.5961 0.59612879 517;3288 O60885;A0A024R7H8;O60885-2;O60885-3;Q6PIS5;Q6NXE4;Q05BM2;Q5BJ26;M0QZD9;A0A024R8H6;Q15059;A0A140F1N4;Q15059-2;B4DS09 BRD4;BRD3 Bromodomain-containing protein 4;Bromodomain-containing protein 3 no no 0 0 1 1 0 1 52.883 52.883 3 0.061656 15533 20230619_1880_Aki_TMTPro18x_K_F1 46.706 18.501 69199 73871 88920 75403 62039 71156 69756 65900 68155 87291 87010 67878 83666 59979 103850 59022 57326 49131 64259 67598 88190 76044 66725 72205 69925 68280 70358 86446 88165 69511 86297 62137 102430 58942 55242 46800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47279000 14677 3288;517 13895 28068 22510 22510 1 9606 Homo sapiens 0.020414571456285557 KLQEESDLELAK Unmodified 1401.7351 0.73512469 355 A0A024R5S5;O75822;O75822-3;O75822-2 EIF3S1;EIF3J Eukaryotic translation initiation factor 3 subunit J yes no 0 0 1 5 0.816 1 1 1 49.24 49.304 3 0.00015869 13602 20230619_1886_Aki_TMTPro18x_K_F6 105.99 71.242 51771 45938 52285 52632 50331 57603 55124 48075 62354 63087 62866 68118 81768 66053 64725 73113 74751 74116 47900 42104 53044 52677 52581 57666 55526 50205 63172 63130 65332 68839 82023 68594 66712 73397 71420 70387 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 965550000 14678 355 13896 28069;28070;28071 22511 22511 1 9606 Homo sapiens 0.05032653524131092 KLQELSSK Unmodified 931.53385 0.53384611 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 1 1 0 1 43.946 43.946 3 0.016528 11831 20230619_1880_Aki_TMTPro18x_K_F1 65.719 20.559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14679 3606 13897 28072 22512 22512 1 9606 Homo sapiens 0.06534054068958994 KLQEYNVGGK Unmodified 1134.6033 0.60332266 731 P46379-3;P46379;P46379-2;A0A7I2V508;A0A0G2JK23;A0A024RCR6;A0A1U9X7A6;A0A1U9X7A9;A0A7P0MQS5;P46379-5;A0A0G2JL47;P46379-4;X6REW1;A0A0G2JJM1;F6S6P2;F6TC96;F6WML8;F6X9W3;F6VEM6;F6U341;A0A1B0GX79;A0A0G2JJR8;A0A7I2V3H1;F6XTU0;F6U1F2;F6UR09 BAG6;BAT3 Large proline-rich protein BAG6 yes no 0 0 1 2 0 1 43.601 43.684 3 0.019332 11529 20230619_1881_Aki_TMTPro18x_K_F2 58.274 47.11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14680 731 13898 28073 22513 22513 1 9606 Homo sapiens 0.04140513017705416 KLQFSLK Unmodified 862.52764 0.52763852 3480 P20290;P20290-2;A0A7I2YQL2;A0A7I2V3T6;A0A1N7SZQ2 BTF3 Transcription factor BTF3 yes no 0 0 1 5 0 1 51.007 51.082 3 0.021365 14216 20230619_1885_Aki_TMTPro18x_K_F5 69.423 14.874 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14681 3480 13899 28074 22514 22514 1 9606 Homo sapiens 0.09087580628090564 KLQGGTPQEPPNPR Unmodified 1517.795 0.79503961 4492 Q9H0B6;Q9H0B6-2;A8MZ87 KLC2 Kinesin light chain 2 yes no 0 0 1 8 0 1 36.864 36.85 3 1.7971E-06 8212 20230619_1888_Aki_TMTPro18x_K_F8 121.18 115.64 51294 35717 44251 45684 39718 46521 49073 52541 53975 58307 63920 59972 65100 52216 52726 57671 63776 56739 47332 32803 45482 45340 41905 47107 49115 53401 55115 58647 65124 60549 65793 54420 54466 57809 60865 53927 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32669000 14682 4492 13900 28075 22515 22515 1 9606 Homo sapiens 0.05685388978031369 KLQIQCVVEDDK Unmodified 1473.7497 0.7497289 2288;2925;271 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;H0YE58;P29692;P29692-3;E9PK01;P29692-4;E9PQZ1;A0A024R3W7;P24534;A4D1M6 EEF1D;EEF1B2;LOC392793 Elongation factor 1-delta;Elongation factor 1-beta no no 0 0 1 5.5 1.12 1 1 1 1 51.083 51.148 3 0.011067 14446 20230619_1886_Aki_TMTPro18x_K_F6 67.456 53.777 74565 72933 73232 90402 73145 115250 88013 67224 138040 122820 107830 140580 175960 151550 115670 222660 166720 279910 69022 66877 74656 90109 76754 113480 89332 73565 136650 121860 115190 142350 174660 159830 122130 225400 159800 264840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2546800000 14683 2288;2925;271 13901 28076;28077;28078;28079 22516 22516 1 9606 Homo sapiens 0.03180402400607818 KLSDDNTIGK Unmodified 1089.5666 0.5666028 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 7 0 1 42.082 42.157 3 0.00052087 10146 20230619_1887_Aki_TMTPro18x_K_F7 104.87 77.005 67824 45781 59307 69180 71565 81500 73887 84542 96511 86469 118480 133950 125480 128450 92151 105810 169260 208270 62581 42131 61205 68071 73505 81505 75094 86190 97842 88758 120880 133590 126480 131530 98624 112350 161470 196590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31646000 14684 1022;3868 13902 28080 22517 22517 1 9606 Homo sapiens 0.0254021640114388 KLSEFGIR Unmodified 948.53927 0.53926584 1535 B3KMZ6;B2RDF5;A0A3R5W301;Q9UBT2;Q9UBT2-2;B3KNA3;U3KQ93;K7ESK7 UBA2 SUMO-activating enzyme subunit 2 yes no 0 0 1 2.5 0.5 1 1 47.722 47.797 3 0.039812 13145 20230619_1882_Aki_TMTPro18x_K_F3 61.48 40.205 322320 263480 298270 323960 313710 364920 356770 351330 383110 319950 336460 266760 283200 253050 357190 296530 292600 225110 297860 241730 305430 322730 325970 365530 358020 359010 386700 323540 344780 273030 294270 263650 358000 293560 280110 214810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160460000 14685 1535 13903 28081;28082 22518 22518 1 9606 Homo sapiens 0.06293777651433174 KLSEIMEK Unmodified 976.52632 0.52631789 3375 Q6FGX9;Q53EY8;Q5T9B7;P00568 AK1 Adenylate kinase isoenzyme 1 yes no 0 0 1 4.5 3.5 1 1 50.181 50.219 3 0.021061 13649 20230619_1888_Aki_TMTPro18x_K_F8 69.01 26.267 160780 119030 134750 163090 143060 170810 192680 188070 244880 218940 219700 243680 246720 216120 212010 250180 275060 261680 148380 109370 139410 161150 149500 172460 192910 191770 245440 220410 227920 245250 249430 225620 219870 251400 262470 248470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 318410000 14686 3375 13904 28083;28084 22519;22520 22520 2 9606 Homo sapiens 0.03711578477020794 KLSSAMSAAK Unmodified 992.53247 0.5324659 3570 V9HWF2;P40925;P40925-3;A0A5K1VW95;P40925-2;B9A041;B8ZZ51 HEL-S-32;MDH1 Malate dehydrogenase;Malate dehydrogenase, cytoplasmic yes no 0 0 1 4 0 1 43.514 43.558 3 0.001577 11085 20230619_1883_Aki_TMTPro18x_K_F4 90.731 50.379 350940 354080 338050 267710 633630 292520 507190 461700 212960 74836 92859 78972 73385 56493 160230 83398 90308 64058 324880 323360 348060 278620 627330 299200 509430 449670 228710 96259 100430 79656 79603 60425 157120 82548 86901 61144 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117510000 14687 3570 13905 28085 22521 22521 1 9606 Homo sapiens 0.03590096708535384 KLSVACFYGGTPYGGQFER Unmodified 2136.0099 0.0098597649 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 1 4.5 0.5 1 1 56.746 56.779 3 1.7805E-14 16970 20230619_1883_Aki_TMTPro18x_K_F4 152.06 142.53 619840 492820 509600 591480 455890 465200 557690 590350 483890 766210 592560 510190 705900 516970 514370 721460 584880 425830 572210 452080 526450 587740 480210 483120 554500 599030 503070 756420 607140 529960 707130 544010 531410 704670 557820 408170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 518640000 14688 1748 13906 28086;28087 22522;22523 22522 2 9606 Homo sapiens -0.012704770591881243 KLTELGTVDPK Unmodified 1199.6762 0.67615325 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;B4DNP4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 1 7.5 0.5 1 1 49.256 49.334 3 0.021088 13218 20230619_1888_Aki_TMTPro18x_K_F8 53.516 28.724 166110 134780 143630 151140 153420 186670 171600 174750 206330 207850 212670 225750 264210 204000 168000 252180 240730 222480 153410 123550 147990 151790 159310 185780 173060 180190 208580 208850 220120 227650 263360 213730 177000 250740 229500 211700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295270000 14689 707 13907 28088;28089 22524 22524 1 9606 Homo sapiens 0.0843022202047905 KLTESYIQLGLQCAGGAGR Unmodified 2021.0364 0.036408866 4738 Q9Y4D7-2;Q9Y4D7 PLXND1 Plexin-D1 yes no 0 0 1 4 0 1 56.828 56.834 3 0.00013925 17007 20230619_1883_Aki_TMTPro18x_K_F4 77.899 61.405 46087 42427 45245 44697 36268 47145 40528 41974 27939 49365 52288 53892 63057 49447 59895 58811 51548 56203 42642 38852 45894 45009 38520 47374 40289 43442 30240 49585 53005 54361 63807 51660 60496 58813 49434 53392 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8866800 14690 4738 13908 28090 22525 22525 1 9606 Homo sapiens 0.06673211832162451 KLTEWFK Unmodified 950.52255 0.52255314 2863 E1NZA1;Q92616;A0A024RBS1;B4DM32 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 1 3 0 1 55.451 55.492 3 0.042364 16543 20230619_1882_Aki_TMTPro18x_K_F3 66.351 29.766 59560 50556 54864 63514 60986 69951 74320 66806 83305 76695 80067 71199 98852 78301 69336 110840 95395 91372 55050 46386 56284 63151 63251 70167 74405 68748 84225 76855 83033 72890 98880 82261 72691 109640 90993 87007 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58538000 14691 2863 13909 28091 22526 22526 1 9606 Homo sapiens 0.04531276765465009 KLTPITYPQGLAMAK Oxidation (M) 1646.9066 0.90656389 1881 A4D2P1;A4D2P0;A0A994J6T1;P63000;P63000-2;A4D2P2;A0A024R9T5 RAC1;hCG_20693 Ras-related C3 botulinum toxin substrate 1 yes no 0 1 1 5 0 1 52.962 53.034 3 0.0040183 15062 20230619_1885_Aki_TMTPro18x_K_F5 92.38 73.548 248440 201460 229730 241500 250240 242770 261780 257650 248800 298120 313720 287320 281700 247330 285050 325830 288010 272170 229570 184790 235260 240680 258300 245870 262980 263280 256990 298630 317300 290960 288690 260480 290200 323080 275420 259140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204060000 14692 1881 13910 28092 22527 22527 1209 1 9606 Homo sapiens 0.10898687290932685 KLTPITYPQGLAMAK Unmodified 1630.9116 0.91164927 1881 A4D2P1;A4D2P0;A0A994J6T1;P63000;P63000-2;A4D2P2;A0A024R9T5 RAC1;hCG_20693 Ras-related C3 botulinum toxin substrate 1 yes no 0 0 1 6 0 1 56.206 56.28 3 0.031602 16600 20230619_1886_Aki_TMTPro18x_K_F6 49.482 37.868 262510 220870 258220 280630 216770 250280 281820 265580 275720 365180 319330 310800 306170 290320 307560 333870 289060 365920 242750 202680 262200 278120 230200 255750 280280 273000 283400 361890 325020 317160 313100 302450 311890 336530 277280 346940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 850970000 14693 1881 13910 28093 22528;22529 22528 2 9606 Homo sapiens 0.12142991153564253 KLTQIQESQVTSHNK Unmodified 1739.9166 0.91661131 3122 Q92541;I7GPQ7 RTF1 RNA polymerase-associated protein RTF1 homolog yes no 0 0 1 2 0 1 40.537 40.611 4 2.1208E-07 10083 20230619_1881_Aki_TMTPro18x_K_F2 122.08 90.565 137990 105480 135290 135140 158210 154460 149510 163510 186710 165440 194800 228800 220600 206800 153540 270310 258710 265800 127520 96839 137970 134320 162190 154970 152460 166440 188390 169060 200750 228750 221390 217240 163770 269990 246570 252480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81061000 14694 3122 13911 28094 22530 22530 1 9606 Homo sapiens 0.07624966549883538 KLTVNPGTK Unmodified 956.56548 0.56548059 261 A0A024R3T8;P09874;B4E0E1;B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 1 4 0 1 41.4 41.443 3 0.001725 10169 20230619_1883_Aki_TMTPro18x_K_F4 84.507 65.051 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14695 261 13912 28095 22531 22531 1 9606 Homo sapiens 0.08546046822903008 KLVAIVDPHIK Unmodified 1231.7652 0.76524303 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 1 3 0 1 50.777 50.847 4 0.0014779 14486 20230619_1882_Aki_TMTPro18x_K_F3 90.146 72.82 84898 90546 99872 79318 105520 115220 121460 92245 94670 94156 112290 83023 95336 54585 136930 67459 60062 58568 78766 82759 100190 81606 109430 113340 120680 95924 98631 94707 113550 83877 99515 58043 133890 67323 58200 55728 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 528950000 14696 3900;2497 13913 28096 22532 22532 1 9606 Homo sapiens 0.15863101770628418 KLVEALCAAGHR Unmodified 1323.7081 0.70813886 3498 Q6FGU2;P23919;Q53F55;P23919-2;G5E9E9;H7C3A4 DTYMK Thymidylate kinase yes no 0 0 1 4 0 1 46.462 46.505 4 2.1939E-07 12376 20230619_1883_Aki_TMTPro18x_K_F4 164.11 127.58 126050 131420 133580 151790 151750 168550 154800 134890 156670 156390 132830 106890 112990 80676 172580 75806 74766 66482 116810 120400 135460 151810 156220 168440 155920 140770 158640 155410 136510 109760 118550 83934 168500 76082 72424 63274 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 277070000 14697 3498 13914 28097 22533 22533 1 9606 Homo sapiens 0.059233112226138473 KLVELPYTVK Unmodified 1188.7118 0.71181048 4562 Q9NPF4 OSGEP Probable tRNA N6-adenosine threonylcarbamoyltransferase yes yes 0 0 1 3 0 1 54.337 54.383 3 0.0061053 16101 20230619_1882_Aki_TMTPro18x_K_F3 74.46 50.903 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14698 4562 13915 28098 22534 22534 1 9606 Homo sapiens 0.12500304268110085 KLVEQLK Unmodified 856.5382 0.53820321 3007 G3V3J9;G3V2N0;P59768;G3V2C9;G3V415 GNG2 Guanine nucleotide-binding protein subunit gamma;Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 yes no 0 0 1 2 0 1 46.145 46.224 3 0.013268 12692 20230619_1881_Aki_TMTPro18x_K_F2 78.516 7.1367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14699 3007 13916 28099 22535 22535 1 9606 Homo sapiens 0.10419563282505351 KLVESLPQEIK Unmodified 1282.7497 0.74965254 2530 B4DLN1;P52815;Q96Q74 MRPL12;MRPL7/L12 39S ribosomal protein L12, mitochondrial yes no 0 0 1 5.33 3.09 1 1 1 52.382 52.431 3;4 2.3973E-06 14532 20230619_1888_Aki_TMTPro18x_K_F8 153.49 76.971 873550 730620 847700 939410 876440 990000 977620 982760 1061700 1109600 1070000 1012600 1147800 966380 1141200 1134100 999440 967070 807660 670550 864320 932120 911000 997000 982600 1007800 1077700 1111600 1100700 1031000 1168300 1007100 1152700 1127900 957410 920410 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2327900000 14700 2530 13917 28100;28101;28102 22536;22537;22538 22538 3 9606 Homo sapiens 0.11958770462911161 KLVGSDQAPGR Unmodified 1126.6095 0.60947067 3969 Q3YEC7;Q3YEC7-2;F2Z2T0;Q3YEC7-3;Q3YEC7-4;Q3YEC7-5;Q3YEC7-6 RABL6 Rab-like protein 6 yes no 0 0 1 4.5 3.5 1 1 36.212 36.206 3 0.019689 7964 20230619_1888_Aki_TMTPro18x_K_F8 62.924 38.132 103790 66208 93698 100250 125610 128250 112050 116760 151960 121550 149430 152100 139660 118700 132050 102100 147340 113690 95759 60947 96524 98763 127600 127270 114990 120180 152330 123570 153010 151800 142480 122650 135070 103660 140590 107980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76646000 14701 3969 13918 28103;28104 22539;22540 22540 2 9606 Homo sapiens 0.05123031249218002 KLVINSGNGAVEDR Unmodified 1470.7791 0.77905519 1496 P16070;P16070-11;H0YD13;B4DN59;A8K309;A0A385KNS5;P16070-7;P16070-12;P16070-14;P16070-13;P16070-8;P16070-10;P16070-17;P16070-3;P16070-16;P16070-6;P16070-4;P16070-18;P16070-5;H0Y2P0;H0YE40;B4E2X0;J3KN83 CD44 CD44 antigen yes no 0 0 1 7 0 1 41.918 41.989 3 0.027462 10107 20230619_1887_Aki_TMTPro18x_K_F7 54.501 39.81 34576 28104 32610 32447 36265 38415 31368 32636 39419 40867 48671 50460 46743 42075 46512 40887 52819 44113 31955 25769 33335 32496 37256 38273 32184 33962 40078 41154 49431 50484 47771 43601 47612 41317 50416 41896 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46036000 14702 1496 13919 28105 22541 22541 1 9606 Homo sapiens 0.06249682741122342 KLVIVGDGACGK Unmodified 1215.6645 0.66454271 220 P61586;A0A024R324;B4DKN9;A0A994J514;P08134;A0A024R0C8;Q5JR08;A0A7I2YQV1;Q5JR05;C9JX21;E9PQH6;C9JNR4;A0A7I2V3G1;Q5JR07;E9PLA2;E9PN11;Q5JR06;C9JRM1;U3KQV3;U3KQA9;A0A7I2V5E6 RHOA;RHOC Transforming protein RhoA;Rho-related GTP-binding protein RhoC yes no 0 0 1 2.5 0.5 1 1 47.773 47.848 3 0.00021417 13488 20230619_1881_Aki_TMTPro18x_K_F2 99.941 72.46 1145400 848130 956970 1091400 1065700 1120900 1193100 1168000 1311500 1479200 1478300 1447700 1605400 1286700 1163000 1662300 1640900 1357000 1057000 778780 990240 1082500 1101800 1132500 1199300 1198300 1337100 1476900 1513600 1465900 1613200 1352300 1219500 1646000 1563400 1293100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 695960000 14703 220 13920 28106;28107 22542;22543 22543 2 9606 Homo sapiens 0.06533701725447827 KLVTDQNISENWR Unmodified 1601.8162 0.81616898 3500 Q59EH3;P24666;G5E9R5;A0A140VK37;P24666-4;F2Z2Q9;O75702 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes no 0 0 1 8 0 1 48.056 48.114 3 0.034534 12783 20230619_1888_Aki_TMTPro18x_K_F8 51.004 17.044 54178 42655 48568 55177 49815 61625 59769 62233 65242 48763 63196 69789 50870 46042 75018 50230 53499 62679 50042 39160 49876 54771 51977 61810 59861 63182 65979 50644 64492 69066 53451 48484 74538 51189 51459 59367 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 440020000 14704 3500 13921 28108 22544 22544 1 9606 Homo sapiens 0.03933354286914437 KLYGDADYLEER Unmodified 1470.6991 0.69907354 3468 P17812;A0A3B3IRI2;B4E1E0;A0A8Q3WKZ7;B4DMB5;P17812-2 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 1 3 0.816 1 1 1 48.439 48.501 3 0.048827 13276 20230619_1883_Aki_TMTPro18x_K_F4 46.926 33.247 106730 116230 124990 134140 109060 115550 133180 109070 102320 147750 154000 135310 143020 111370 200700 114610 127420 145310 99038 106470 125270 133770 114990 118180 131980 113030 108200 146770 155120 137070 148860 115960 198560 117120 122750 137620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284620000 14705 3468 13922 28109;28110;28111 22545 22545 1 9606 Homo sapiens -0.01744803652718474 KLYIDSR Unmodified 893.49707 0.49706667 3304 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 0 1 1 0 1 41.173 41.173 3 0.078559 10598 20230619_1880_Aki_TMTPro18x_K_F1 44.753 1.6296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14706 3304 13923 28112 22546 22546 1 9606 Homo sapiens 0.046058022430429446 KMDQPPQAK Unmodified 1041.5277 0.52771487 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 0 1 8 0 1 37.615 37.601 3 0.0014036 8475 20230619_1888_Aki_TMTPro18x_K_F8 85.355 61.504 50117 26402 66742 65501 77113 97682 72289 82553 91643 63749 82859 81922 79429 72272 81509 47683 101280 81749 46366 24519 66583 63273 79231 95858 73795 84832 91804 66049 85279 81976 81326 73592 83733 50343 96578 77357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73802000 14707 3544 13924 28113 22547 22547 1 9606 Homo sapiens 0.00861212565769165 KMEDSVGCLETAEEVK Oxidation (M) 1839.823 0.82302978 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16 MYH9 Myosin-9 yes no 0 1 1 3 0 1 47.305 47.384 3 0.00085816 12950 20230619_1882_Aki_TMTPro18x_K_F3 76.82 52.779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14708 148 13925 28114 22548 22548 73 1 9606 Homo sapiens -0.06328881729723435 KMEGHYVHAGNIIATQR Oxidation (M) 1939.9687 0.96866365 4641 Q9P0M9;H7C5U8;D6RE11;B3KN43 MRPL27 39S ribosomal protein L27, mitochondrial yes no 0 1 1 2 0 1 34.747 34.803 5 0.051421 7591 20230619_1881_Aki_TMTPro18x_K_F2 43.164 35.077 113290 93853 104200 110430 125270 129970 133250 126320 153940 142400 143960 139630 165150 143330 140860 155140 175060 147380 104700 86064 106970 110440 128640 129900 134490 129720 155280 143020 149060 142030 166780 148340 145610 155260 166970 140160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54130000 14709 4641 13926 28115 22549 22549 2841 1 9606 Homo sapiens 0.036278066920203855 KMEGHYVHAGNIIATQR Unmodified 1923.9737 0.97374903 4641 Q9P0M9;H7C5U8;D6RE11;B3KN43 MRPL27 39S ribosomal protein L27, mitochondrial yes no 0 0 1 2 0 1 37.59 37.651 5 0.010254 8771 20230619_1881_Aki_TMTPro18x_K_F2 60.034 48.764 41168 32354 40667 43123 43980 48292 41017 43544 53488 53400 49916 59605 65812 56827 55964 57735 63997 71272 38054 29712 41412 42723 45362 48329 41930 45072 53687 53642 52142 60089 66209 58776 57533 58759 61205 67524 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29812000 14710 4641 13926 28116 22550 22550 1 9606 Homo sapiens 0.048721105546292165 KMEGVTNAVLHEVK Unmodified 1553.8236 0.82356254 1260 A0A1B0GVH5;A0A1B0GTC3;B3KU60;Q9C0B1;A0A1B0GUC3;A0A1B0GU26;A0A1B0GTC5;A0A1B0GV98;B4DHN4;A0A1B0GUY7;A0A1B0GTI3;Q9C0B1-4;A0A1B0GTZ8 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes no 0 0 1 1 0 1 52.371 52.371 4 6.9614E-05 15335 20230619_1880_Aki_TMTPro18x_K_F1 99.566 77.693 32197 27579 31446 34528 29946 39309 32773 38512 48554 36467 39475 40138 45921 32538 35121 44423 48996 48263 29775 25302 32009 34360 31381 39349 33380 39328 48173 37096 41198 40341 46124 34479 36719 44631 46740 45802 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202770000 14711 1260 13927 28117 22551 22551 1 9606 Homo sapiens 0.06880370562930693 KMEIYRPHK Unmodified 1200.6437 0.64374769 4305;2659 Q6IT96;B5BU61;Q13547;Q5TEE2;B4DSK9;Q92769;Q92769-3;B3KUJ5;H3BM24;A0A7R6V290;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;E5RK19 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 no no 0 0 2 4 0 1 37.861 37.904 5 0.0015029 8669 20230619_1883_Aki_TMTPro18x_K_F4 104.52 89.257 263370 193820 234210 240610 248310 285040 280400 256190 283280 282430 296930 271080 293630 232080 275310 287350 321440 231910 243160 177910 240620 239730 257770 284180 280930 264460 289000 283690 303710 274480 298820 243600 282850 284790 306490 221180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 243140000 14712 2659;4305 13928 28118 22552 22552 1 9606 Homo sapiens 0.05145156136472906 KMEMEMEQVFEMK Unmodified 1688.7282 0.72820688 1949 Q8TC62;E7EPK1;A4GYY8;Q3LIE9;Q16181;Q16181-2;E7ES33;B4DUD6;B4DNE4;A0A024RA87;A0A023T695;G3V1Q4;B4DPQ6;Q59EY4;Q5JXL7;A0A0U1RRM2;A4D1Y2 SEPT7;DKFZp686F17268;Nbla02942;DKFZp586I031;LOC392884 Septin-7 yes no 0 0 1 6 0 1 62.119 62.17 3 0.063316 19024 20230619_1886_Aki_TMTPro18x_K_F6 43.813 37.781 36813 29552 39454 37673 32687 39689 41166 37188 46130 42990 42540 44506 48134 41607 46603 45935 72132 55582 34056 27125 39752 37411 34738 39915 41171 38335 46570 43196 44083 45006 48918 43259 48809 46633 68654 52750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38427000 14713 1949 13929 28119 22553 22553 1 9606 Homo sapiens -0.08860810006285647 KMESDFEQK Unmodified 1140.5121 0.51212439 1901 A0RZB8;Q6URC4;O60610-2;O60610-3;O60610;A0A1E1ERW3;A0A2R8Y5N1 DIAPH1 Protein diaphanous homolog 1 yes no 0 0 1 4.5 0.5 1 1 43.126 43.189 3 0.0031361 10917 20230619_1883_Aki_TMTPro18x_K_F4 85.924 56.596 163120 120350 156470 157560 157510 179480 163450 158700 193140 207890 226620 229610 230730 191210 195530 227560 286040 246600 150690 110530 159520 156330 163780 179330 165440 164900 196490 208110 231090 230790 233730 200470 204590 229070 272540 234170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73019000 14714 1901 13930 28120;28121 22554 22554 1 9606 Homo sapiens -0.052511187419213456 KMGVPYCIIK Unmodified 1207.6457 0.64572152 3722 P62424;Q9BY74;Q5T8U2 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 0 0 1 5.5 0.5 1 1 52.799 52.873 3 0.0038232 15002 20230619_1885_Aki_TMTPro18x_K_F5 74.841 54.637 116860 124520 138970 122180 126390 165190 143640 129750 123480 86666 90188 88245 97424 69906 98540 86773 90843 92229 108430 113910 139080 124240 132810 162960 143220 133890 125510 90013 94459 88936 99168 73679 99691 87273 87002 87537 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80178000 14715 3722 13931 28122;28123 22555 22555 1 9606 Homo sapiens 0.05020448830055102 KMPFTEK Unmodified 879.45242 0.45242467 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 0 0 1 2 0 1 44.948 45.031 3 0.033551 12150 20230619_1881_Aki_TMTPro18x_K_F2 69.812 20.715 703630 644390 775190 757840 970320 950860 975150 877110 824340 880000 981960 869640 939760 708780 1327300 626860 931390 801400 651660 590700 784310 758730 990800 945580 978250 901340 854960 888620 998560 877600 977640 732880 1317100 643410 894080 759800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 631620000 14716 150 13932 28124 22556 22556 1 9606 Homo sapiens 0.007876551053527692 KMTEIQTPENTPR Oxidation (M) 1559.7614 0.76135622 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;B3KVJ5 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 1 1 6 0 1 36.654 36.723 3 0.0055504 8234 20230619_1886_Aki_TMTPro18x_K_F6 94.507 88.526 41348 28801 31663 32300 36957 37472 35601 37203 44241 41883 52308 39257 41110 30441 38036 37131 39404 29325 38123 26417 33045 32414 37946 37511 36254 38137 44875 41996 52697 39711 42125 32055 38800 36781 37619 27972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39939000 14717 4593 13933 28125 22557 22557 2820 1 9606 Homo sapiens 0.0038659942397316627 KNAEQAATQLK Unmodified 1200.6463 0.64625011 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 1 8 0 1 41.184 41.176 3 3.2384E-05 9952 20230619_1888_Aki_TMTPro18x_K_F8 138.02 80.672 45391 38037 49945 45072 55322 47589 54842 51365 45308 51630 66833 36711 35679 25702 64962 18015 25096 15663 42013 34881 50392 45002 56869 48062 55058 52218 47535 51673 66041 37613 38690 26501 63082 18263 24332 14936 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25907000 14718 380 13934 28126 22558 22558 1 9606 Homo sapiens 0.05395283075131374 KNAGFTPQER Unmodified 1146.5782 0.57817054 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 1 5.33 3.09 1 1 1 35.201 35.221 3 0.00058326 7564 20230619_1888_Aki_TMTPro18x_K_F8 101.93 74.6 187650 148340 210230 203740 282190 246610 253170 221900 193500 220690 268300 148350 121220 90577 276070 64589 85470 37045 173650 136270 212650 201740 285860 245690 255140 228390 203480 220760 264790 152040 135350 94039 266310 64539 83284 35655 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129740000 14719 3515 13935 28127;28128;28129 22559;22560 22560 2 9606 Homo sapiens 0.010744582151346549 KNCPHVVVGTPGR Unmodified 1419.7405 0.74050162 3204 O00148;B4DX78;O00148-2;K7EQN7;A0A024R7H0;O00148-3;A0A0D9SEM9;K7EPJ3 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A yes no 0 0 1 4 0 1 33.809 33.863 4 6.4527E-06 7112 20230619_1883_Aki_TMTPro18x_K_F4 127.36 114.24 57300 53618 55801 58577 61998 72123 68571 64999 69381 62896 82571 64145 66596 53259 67693 48362 55523 36839 53020 49114 56931 58943 64101 71746 68787 66843 71096 63725 83277 64729 68466 55030 68031 48124 53112 35180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120210000 14720 3204 13936 28130 22561 22561 1 9606 Homo sapiens 0.047420986255929165 KNEELEQLYQDQEVPKPK Unmodified 2214.1168 0.11682726 3146 J3QQZ9;V9HW45;Q53FP0;Q9NVS9-3;Q9NVS9;Q9NVS9-4;J3QQV6;A0A286YFL3 PNPO;HEL-S-302 Pyridoxine-5'-phosphate oxidase yes no 0 0 2 6 0 1 51.443 51.52 4 0.0029958 14593 20230619_1886_Aki_TMTPro18x_K_F6 70.942 58.013 36138 22878 30608 40707 35062 53895 47408 50203 56817 40526 42068 48643 47363 42727 39656 44494 44747 57396 33327 21106 31712 39770 36541 53332 47350 51269 56704 41753 44128 48798 47831 44369 40772 45391 42852 54332 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37441000 14721 3146 13937 28131 22562 22562 1 9606 Homo sapiens 0.05833351636192674 KNEGLTWPELVIGDK Unmodified 1697.8988 0.89883598 4394 Q96RS6;Q96RS6-3;Q96RS6-2;A0A7I2V457 NUDCD1 NudC domain-containing protein 1 yes no 0 0 1 8 0 1 61.283 61.316 3 3.2622E-05 18333 20230619_1888_Aki_TMTPro18x_K_F8 98.507 84.828 120190 97548 130360 128150 95013 130920 111970 122150 153590 137530 124890 156990 172560 160600 113110 203360 177180 199050 111210 89558 131050 126940 102200 131900 113280 125810 153000 138830 131720 158620 171960 167730 120110 203140 169060 189030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43759000 14722 4394 13938 28132 22563 22563 1 9606 Homo sapiens 0.07780251295002927 KNEIMVAPDK Unmodified 1143.5958 0.59579444 4558 Q9NP97;A0A8V8TKK9;B1AKR6 DYNLRB1 Dynein light chain roadblock-type 1 yes no 0 0 1 7 0 1 44.827 44.913 3 0.015991 11294 20230619_1887_Aki_TMTPro18x_K_F7 59.306 36.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14723 4558 13939 28133 22564 22564 1 9606 Homo sapiens 0.02974037425769893 KNELFSNL Unmodified 963.50255 0.50254598 2231 B2R6A3;O14745;O14745-2 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF;Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 0 0 1 7.5 0.5 1 1 55.852 55.914 3 0.047419 16151 20230619_1887_Aki_TMTPro18x_K_F7 57.598 37.986 25452 23931 24721 21937 16883 19102 26743 23572 27515 26492 28744 20963 26617 19040 21987 29708 23598 23582 23551 21889 25042 22317 18421 19653 26419 23859 28020 26446 29282 21508 26987 20281 22573 29315 22563 22464 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32756000 14724 2231 13940 28134;28135 22565 22565 1 9606 Homo sapiens 0.01933481034848228 KNELLHLGGR Unmodified 1135.6462 0.64619053 1819 Q6PGP7;A0A8V8TMA8;A0A8V8TMB2;A0A8V8TLS3;A0A8V8TLT2;A0A8V8TNJ4;A0A8V8TLU2;A0A8V8TLT7;A0A8V8TLU5;A0A8V8TNK4;A0A8V8TN92;A0A8V8TLR0 TTC37 Tetratricopeptide repeat protein 37 yes no 0 0 1 2.5 0.5 1 1 42.177 42.248 4 0.0038618 10612 20230619_1882_Aki_TMTPro18x_K_F3 78.908 52.789 30498 24073 30360 28301 28112 35313 32676 31497 38675 39809 40837 41269 43968 37063 32865 45743 45319 44293 28193 22079 30812 28335 29541 35082 32873 32660 39158 39836 41922 41691 44255 38828 34372 45709 43233 42089 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63211000 14725 1819 13941 28136;28137 22566 22566 1 9606 Homo sapiens 0.08379327865782216 KNEPEDEEEEEEEDEDEEEEDEDEE Unmodified 3126.06 0.060016799 4068 Q5U071 yes yes 0 0 1 1 0 1 43.786 43.786 3 9.6701E-20 11737 20230619_1880_Aki_TMTPro18x_K_F1 154.6 154.6 65755 51694 58730 60079 59054 72019 79198 77880 94043 79408 92411 94681 98117 92849 72565 104470 107320 123390 60734 47408 60281 60168 61937 72039 79124 79188 94825 80670 95122 95407 98844 96433 76339 105750 102460 116940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64383000 14726 4068 13942 28138 22567;22568 22568 2 9606 Homo sapiens -0.4179708091264729 KNIILEEGK Unmodified 1042.6023 0.60226003 3495 V9HWI5;P23528;G3V1A4;E9PK25;E9PP50;B4E112;E9PQB7;E9PLJ3;E9PS23 HEL-S-15;CFL1 Cofilin-1 yes no 0 0 1 7 1 1 1 46.695 46.761 3 7.095E-05 12145 20230619_1888_Aki_TMTPro18x_K_F8 115.57 56.596 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14727 3495 13943 28139;28140 22569;22570 22570 2 9606 Homo sapiens 0.08266298648823067 KNITRPFEDQTSLEFFSK Unmodified 2186.1008 0.10078326 2112 A8K800;Q9H7B2;Q5VXN0 RPF2 Ribosome production factor 2 homolog yes no 0 0 2 2 0 1 56.443 56.461 4 0.00012737 17214 20230619_1881_Aki_TMTPro18x_K_F2 90.654 52.077 41859 32640 44102 39637 37309 43270 40992 36775 44119 38650 34220 32177 35922 24546 42763 30088 32660 30151 38711 29947 44482 39514 39399 43331 41224 38085 44377 38776 35660 32687 36884 25901 42734 30194 31329 28646 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37972000 14728 2112 13944 28141 22571 22571 1 9606 Homo sapiens 0.0551769018993582 KNKEEAAEYAK Unmodified 1279.6408 0.64083038 1910 Q96DV6;A2A3R6;P62753;A2A3R5 RPS6 40S ribosomal protein S6 yes no 0 0 2 7 0 1 38.474 38.537 4 0.0042519 8687 20230619_1887_Aki_TMTPro18x_K_F7 77.078 52.52 124130 63769 226150 200310 274070 227960 202110 241790 104510 139380 195180 79767 80509 50063 172250 18091 38385 18296 115300 59545 221690 191240 277820 228620 205320 243160 115700 144280 190370 82950 89783 51077 165300 19246 37882 17449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141850000 14729 1910 13945 28142 22572 22572 1 9606 Homo sapiens 0.012195594926424747 KNNVNVASLTQSEIR Unmodified 1671.8904 0.89039656 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q53GM6 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 1 2 0 1 46.017 46.096 3 5.6171E-14 12626 20230619_1881_Aki_TMTPro18x_K_F2 178.03 151.02 83392 50998 71334 95343 82308 104360 95295 93869 107100 100900 107530 107820 102840 84176 111120 82489 88448 88106 76897 47091 73804 92639 85116 104490 95676 96829 108430 101810 110140 108280 105440 87539 111440 83350 84843 83625 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 331590000 14730 1863 13946 28143 22573 22573 1 9606 Homo sapiens 0.08132697378437115 KNPAVQAGSIVVLQGGEETQR Unmodified 2180.1549 0.1549441 1198 J3K000;P12955;A0A8V8TLL9;A0A8V8TLP4;A0A140VJR2;A0A494C165;P12955-2;P12955-3;K7ES25;A0A8V8TLR1;A0A494C194;A0A8V8TN48;A0A8V8TNF2;A0A8V8TLP2;A0A8V8TN70;A0A8V8TM86 PEPD Xaa-Pro dipeptidase yes no 0 0 1 8 0 1 49.136 49.209 3 5.7622E-45 13182 20230619_1888_Aki_TMTPro18x_K_F8 243.18 231.43 46490 37480 37198 43557 34889 46688 46669 33078 57889 82118 79953 88662 74754 70579 65302 70312 73787 93159 42913 34368 38578 43517 36842 46664 46697 36091 59307 80542 80808 88978 76046 73392 67073 71929 70651 88169 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113820000 14731 1198 13947 28144 22574 22574 1 9606 Homo sapiens 0.11207282341501923 KNPEVPVNFAEFSK Unmodified 1604.8199 0.81985738 3240 O15347;E9PES6;E7ES08;E7EQU1;Q7Z684 HMGB3;DKFZp779G118 High mobility group protein B3 yes no 0 0 1 7.5 0.5 1 1 55.549 55.61 3 1.3592E-08 15983 20230619_1888_Aki_TMTPro18x_K_F8 151.8 118.6 264030 200920 219380 269800 224970 282210 289180 288100 296480 311450 312800 354410 354480 300700 289880 376380 392990 418910 243690 184560 227030 266880 235290 284420 288060 294580 302390 314730 322250 355970 357500 316010 302070 379100 375190 397340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192090000 14732 3240 13948 28145;28146 22575 22575 1 9606 Homo sapiens 0.04164024060764859 KNQELEVVR Unmodified 1113.6142 0.6142217 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;Q59F36 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 0 1 5.5 0.5 1 1 38.409 38.497 3 0.022625 8901 20230619_1886_Aki_TMTPro18x_K_F6 64.103 44.341 191180 143410 186960 208160 214100 253870 230740 224970 269270 269990 294000 279420 277260 245860 247730 297900 304580 303420 176660 131850 190850 205390 220870 252460 232870 233020 273120 270770 299610 282180 282210 257430 255840 298690 290860 288140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 179910000 14733 1717 13949 28147;28148 22576 22576 1 9606 Homo sapiens 0.06195915392004281 KNSVVEASEAAYK Unmodified 1394.7042 0.70415892 145 A0A024R1K7;Q04917;Q9H4N8;A2IDB2 YWHAH 14-3-3 protein eta yes no 0 0 1 8 0 1 45.364 45.392 3 0.00029325 11641 20230619_1888_Aki_TMTPro18x_K_F8 101.62 61.511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14734 145 13950 28149 22577 22577 1 9606 Homo sapiens 0.02259500209925136 KNVGQFSGFPFEK Unmodified 1483.746 0.74596415 3032 H0Y993;P35659;B4DFG0;A0A494C028;P35659-2;H0Y8X0;D6RDA2 DEK Protein DEK yes no 0 0 1 3.5 0.5 1 1 55.982 56.005 3 2.1183E-06 16760 20230619_1882_Aki_TMTPro18x_K_F3 119.32 105.16 93523 84644 99900 99398 85811 83929 99395 87878 82910 108160 106940 70626 84335 53103 109060 64200 56811 50814 86584 77593 100720 99008 90446 86199 98973 90093 86446 107000 107420 72838 87743 56046 107330 63749 54820 48427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 241580000 14735 3032 13951 28150;28151 22578 22578 1 9606 Homo sapiens 0.023441006890834615 KNYCNIQVTK Unmodified 1266.6391 0.63905624 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 1 3 0 1 43.174 43.24 3 0.0079755 11016 20230619_1882_Aki_TMTPro18x_K_F3 69.979 37.245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14736 2181 13952 28152 22579 22579 1 9606 Homo sapiens 0.01640227203051836 KPAAAGVK Unmodified 740.45447 0.45447358 3461 P16401 HIST1H1B Histone H1.5 yes yes 0 0 1 3 0 1 36.438 36.493 3 0.018981 8161 20230619_1882_Aki_TMTPro18x_K_F3 61.962 27.884 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14737 3461 13953 28153 22580 22580 1 9606 Homo sapiens 0.07386451905460945 KPAAGLSAAPVPTAPAAGAPLMDFGNDFVPPAPR Unmodified 3270.686 0.68595344 4571 Q9NQC3;Q9NQC3-2;Q9NQC3-5;Q6IPN0;Q53R94 RTN4 Reticulon-4;Reticulon yes no 0 0 1 3 0 1 62.456 62.486 4 1.8487E-10 19484 20230619_1882_Aki_TMTPro18x_K_F3 102.58 97.57 19309 17326 15731 13254 13884 21545 14893 18943 19367 19393 15629 16167 16564 12452 19681 15376 17018 13846 17838 15831 16240 13854 14663 21097 15110 19518 19341 19475 16264 16420 17012 13131 19785 15335 16287 13179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197430000 14738 4571 13954 28154 22581 22581 1 9606 Homo sapiens 0.14143789751915392 KPAALKPK Unmodified 851.55927 0.559273 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 2 5.5 0.5 1 1 38.841 38.928 4 0.045921 9067 20230619_1886_Aki_TMTPro18x_K_F6 59.8 50.367 197150 121100 271420 257770 387520 385720 287550 336720 311140 78213 98277 87669 92839 70603 169970 73680 100080 81136 182590 112060 271130 250510 390120 378950 296500 340270 306530 93562 110750 88254 98574 73599 167080 74730 96297 77054 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75992000 14739 630 13955 28155;28156 22582 22582 1 9606 Homo sapiens 0.12755573382025887 KPADLQNLAPGTHPPFITFNSEVK Unmodified 2620.3649 0.36493687 2612 B4DWC4;Q6FIC5;Q9Y696;B3KTR3;Q9NVF8 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 0 1 2.5 0.5 1 1 58.112 58.134 4 4.7341E-13 17661 20230619_1882_Aki_TMTPro18x_K_F3 121.62 107.31 64406 69098 82614 60211 47196 74166 63601 53485 52114 84859 72445 65602 86144 53738 97800 63004 49096 65229 59809 63152 81757 61816 52354 73479 62899 56924 54714 83444 73983 67017 87820 56433 96369 63406 47558 61872 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134780000 14740 2612 13956 28157;28158 22583 22583 1 9606 Homo sapiens 0.11956900223776756 KPAFTEASCPLSR Unmodified 1462.7238 0.7238485 3241 O15357;O15357-2 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 0 0 1 2 0 1 44.305 44.388 3 0.00013749 11877 20230619_1881_Aki_TMTPro18x_K_F2 97.417 82.445 177260 143930 171630 170330 175490 200700 183210 175930 193640 195160 196810 175030 208960 154400 177030 207750 213630 192000 163860 132000 174870 170270 182240 200080 184640 181960 196890 195610 202140 178010 211240 162880 182760 206940 203900 182610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90182000 14741 3241 13957 28159 22584 22584 1 9606 Homo sapiens 0.010995529489719047 KPAISLADSTDLR Unmodified 1385.7514 0.75144346 2054 A8K4U4;Q5VSL9-2;Q5VSL9 STRIP1 Striatin-interacting protein 1 yes no 0 0 1 7.5 0.5 1 1 48.355 48.432 3 0.060956 12891 20230619_1888_Aki_TMTPro18x_K_F8 44.246 24.668 75397 63567 71522 83424 71470 81724 79110 85419 86723 86052 87586 98540 96073 78292 89434 99388 95695 99390 69701 58352 73050 82581 74477 82837 79591 87029 87977 87287 90279 98764 97448 82549 91461 99510 91526 94387 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109460000 14742 2054 13958 28160;28161 22585 22585 1 9606 Homo sapiens 0.0739977948089745 KPALELLHYLK Unmodified 1323.7915 0.79145778 3623 P51398-2;P51398-3;P51398;V9GYL9;V9GZ03 DAP3 28S ribosomal protein S29, mitochondrial yes no 0 0 1 4.5 0.5 1 1 59.126 59.154 4 0.00039596 17503 20230619_1885_Aki_TMTPro18x_K_F5 103.75 40.265 78850 66648 76541 85133 71451 93065 90279 87684 105350 90597 80657 70671 85824 71963 88681 93584 81792 76489 72908 61163 77946 84547 75253 93338 90381 90027 105470 90844 84099 72746 87560 75332 89773 92734 78288 72851 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30167000 14743 3623 13959 28162;28163 22586 22586 1 9606 Homo sapiens 0.1425137094213369 KPALFPEPAK Unmodified 1096.6281 0.62808085 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 1 2 0 1 49.312 49.371 3 0.022761 14170 20230619_1881_Aki_TMTPro18x_K_F2 62.408 43.31 147190 116940 144620 132650 158900 162800 162800 154450 196420 138670 140610 123550 160140 123480 147840 153330 172430 130310 136060 107210 147250 133140 163970 162200 164920 157930 195830 140670 147640 126240 162210 128990 151910 152320 164450 124170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106700000 14744 4372 13960 28164 22587 22587 1 9606 Homo sapiens 0.08363192891079052 KPALVAK Unmodified 725.47996 0.47996005 2288;2925;271 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;H0YE58;P29692;P29692-3;E9PK01;P29692-4;E9PQZ1;E9PI39;E9PQ49;E9PL71;A0A024R3W7;P24534;A4D1M6 EEF1D;EEF1B2;LOC392793 Elongation factor 1-delta;Elongation factor 1-beta no no 0 0 1 3 0 1 42.057 42.12 3 0.026897 10509 20230619_1882_Aki_TMTPro18x_K_F3 63.21 9.0052 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14745 2288;2925;271 13961 28165 22588 22588 1 9606 Homo sapiens 0.10623926427888364 KPAPVPAEPFDNTTYK Unmodified 1773.8938 0.8937506 3662 P56181 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial yes yes 0 0 1 8 0 1 49.977 50.054 3 1.5019E-05 13527 20230619_1888_Aki_TMTPro18x_K_F8 97.579 78.746 44044 37240 47402 51387 54008 58260 45512 46965 56118 46662 53574 46588 57196 49973 47506 59572 52423 56983 40761 34204 47986 50799 55346 58127 46732 48759 56453 47214 55187 47475 57811 51938 48818 59531 50142 54133 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35394000 14746 3662 13962 28166 22589 22589 1 9606 Homo sapiens 0.037759474324047915 KPASFMTSICDER Unmodified 1540.7014 0.7013985 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 1 4.5 3.5 1 1 48.76 48.793 3 7.3399E-08 13845 20230619_1880_Aki_TMTPro18x_K_F1 154.19 141.42 624350 525560 596460 555310 374470 472620 482520 508590 501480 679580 619860 544260 672310 555180 625570 743040 663930 580010 577210 481440 604580 557780 409950 485210 481520 521660 515380 673190 632250 559410 682130 582220 639690 734260 634290 552930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 970040000 14747 161 13963 28167;28168 22590;22591 22590 2 9606 Homo sapiens -0.04732414510885974 KPASGPGAVVRPPK Unmodified 1359.7987 0.79866842 994 A0A0C4DG31;Q9GZR2-2;Q9GZR2 REXO4 RNA exonuclease 4 yes no 0 0 2 6 0 1 38.342 38.425 4 0.00086358 8900 20230619_1886_Aki_TMTPro18x_K_F6 89.624 66.019 54192 30524 48767 54870 62813 74597 58675 57454 69208 67937 71329 77615 78755 67925 61733 82829 86133 77944 49971 28181 50244 53607 64092 73487 59724 60158 70020 68415 73433 78022 79365 71153 64533 82665 82119 74114 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45451000 14748 994 13964 28169 22592 22592 1 9606 Homo sapiens 0.13316103542547353 KPATSYVR Unmodified 920.50797 0.50796571 3051 H0YKD8;P46779;P46779-2;P46779-3 RPL28 60S ribosomal protein L28 yes no 0 0 1 2.5 0.5 1 1 34.962 35.021 3 0.0091409 7573 20230619_1882_Aki_TMTPro18x_K_F3 81.95 46.701 566440 404220 516820 448130 1089700 1431700 406120 869980 1330100 162.38 0 45407 31764 32522 93078 25342 49264 30460 522970 370690 537240 461480 1072500 1359100 477680 902080 1245900 51290 62156 44253 35006 33525 90757 26098 47429 28946 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 341280000 14749 3051 13965 28170;28171 22593 22593 1 9606 Homo sapiens 0.04453204617323081 KPDAYTEQLHNEEENEDAR Unmodified 2286.9989 0.99889697 557 Q6IAJ3;A0A024R967;Q6FIF9;B1ALM5;B4E1H4;Q9P0T7;B1ALM7;B1ALM8;B1ALM4 TMEM9 Transmembrane protein 9 yes no 0 0 1 2 0.816 1 1 1 39.98 40.022 4 9.9053E-05 10130 20230619_1880_Aki_TMTPro18x_K_F1 85.61 78.164 38451 24118 35529 38337 36086 41522 39977 40661 48686 42943 51284 52701 55905 43999 43908 59237 65009 54698 35480 22217 36362 37571 37575 41701 40360 41665 49185 43583 52692 52793 56340 46479 46104 58982 61925 52038 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143450000 14750 557 13966 28172;28173;28174 22594;22595 22594 2 9606 Homo sapiens -0.09312252690415335 KPDHVPISSEDER Unmodified 1507.7267 0.72668527 1889 A1LT96;A0AVT1;B3KSS1;A0AVT1-2 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 1 2.5 0.5 1 1 35.692 35.749 4 0.0004063 7872 20230619_1882_Aki_TMTPro18x_K_F3 94.717 86.992 52524 41040 52248 55423 64792 67601 60323 61134 70837 60841 71974 78199 72586 60526 66883 77498 74796 70742 48552 37696 53301 54934 66168 67284 61413 62896 71587 62044 73859 78008 73789 63890 68606 77203 71460 67277 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168060000 14751 1889 13967 28175;28176 22596;22597 22597 2 9606 Homo sapiens -0.006869003924975914 KPDIYER Unmodified 919.47633 0.47633123 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57;A0A3B3ITP6;A0A3B3IRR8 MCM4 DNA replication licensing factor MCM4 yes no 0 0 1 6.5 0.5 1 1 38.442 38.515 3 0.058238 8889 20230619_1886_Aki_TMTPro18x_K_F6 65.465 38.367 335750 239780 270700 292190 325120 333280 321430 322840 400220 374950 398120 376560 418120 350310 349820 394570 403100 342910 309710 220080 281300 291340 333390 333750 326730 331890 403180 376290 409220 381390 422840 364510 360090 392850 384750 326460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 741370000 14752 471 13968 28177;28178 22598 22598 1 9606 Homo sapiens 0.013372118633810715 KPDREEIQMSNMGSNTK 2 Oxidation (M) 1995.899 0.89898869 1594 O60716;H0YC95;O60716-3;O60716-2;Q68DU0;C9JZR2;A0A669KB05;O60716-5;O60716-11;O60716-10;O60716-9;O60716-17;Q96FS1;O60716-21;O60716-19;O60716-13;O60716-18;Q7KZJ3;O60716-26;A0A024R4Z0;O60716-25;O60716-27;O60716-29;A0A804HIL4;A0A804HK15 CTNND1;DKFZp781O2021 Catenin delta-1 yes no 0 2 2 5.5 0.5 1 1 34.935 35.005 4 5.0864E-05 7617 20230619_1886_Aki_TMTPro18x_K_F6 94.01 70.211 18144 10854 15519 16870 17095 19466 17303 18677 23043 18362 23245 20242 24725 20769 14002 25337 27020 22867 16729 9998.1 16015 16569 17660 19458 17616 19122 23138 18645 23864 20512 24690 21644 15206 25217 25698 21761 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23498000 14753 1594 13969 28179;28180 22599 22599 1037;1038 1 9606 Homo sapiens -0.05912484829582354 KPDREEIQMSNMGSNTK Unmodified 1963.9092 0.90915944 1594 O60716;H0YC95;O60716-3;O60716-2;Q68DU0;C9JZR2;A0A669KB05;O60716-5;O60716-11;O60716-10;O60716-9;O60716-17;Q96FS1;O60716-21;O60716-19;O60716-13;O60716-18;Q7KZJ3;O60716-26;A0A024R4Z0;O60716-25;O60716-27;O60716-29;A0A804HIL4;A0A804HK15 CTNND1;DKFZp781O2021 Catenin delta-1 yes no 0 0 2 7 0 1 41.302 41.373 4 0.006448 9836 20230619_1887_Aki_TMTPro18x_K_F7 69.188 43.869 35572 24205 38486 31860 34931 42254 38507 33518 49902 44677 44049 45225 49400 42441 33281 43521 58068 50634 32880 22239 38764 31688 36700 41727 38967 35151 49956 44602 45687 45771 49514 43941 35544 44087 55268 48044 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38012000 14754 1594 13969 28181 22600 22600 1 9606 Homo sapiens -0.03423877104364692 KPDWDLK Unmodified 900.47052 0.47051757 3133 J3KR35;Q8WUD4 CCDC12 Coiled-coil domain-containing protein 12 yes no 0 0 1 8 0 1 48.287 48.353 3 0.054263 12819 20230619_1888_Aki_TMTPro18x_K_F8 61.679 33.937 109550 63570 89196 117480 101310 119280 101750 100070 146540 125170 126980 150800 133670 129900 98297 177440 175300 168980 100960 58706 92655 114080 104490 119940 103930 104290 145930 126020 131600 151220 134750 137090 105260 176820 166940 160610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87194000 14755 3133 13970 28182 22601 22601 1 9606 Homo sapiens 0.016301133517117705 KPEASHSFENR Unmodified 1300.616 0.61601261 4337 Q96DP0;P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial yes no 0 0 1 5.5 0.5 1 1 31.896 31.952 4 2.0113E-05 6483 20230619_1886_Aki_TMTPro18x_K_F6 142.12 135.73 120160 111270 116660 122330 193470 196720 190520 173120 247000 129120 137290 127080 138630 110470 128090 139970 163580 140050 111170 101930 120010 123630 194750 192780 193770 177270 243690 133050 146000 128650 140990 116100 132450 140150 156000 133110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87481000 14756 4337 13971 28183;28184 22602 22602 1 9606 Homo sapiens -0.022270755900535733 KPEDPEECPEEVYDPR Unmodified 1987.8469 0.84693634 411 H3BN22;Q6P4H7;H3BSF0;H3BQQ6;H3BTI2;H3BTP8;H3BSY6;H3BP64;H3BUL4;H3BMX9;A0A024R6T8;Q9GZU8 FAM192A;NIP30 Protein FAM192A yes no 0 0 1 2 0 1 44.677 44.759 3 0.0011323 12040 20230619_1881_Aki_TMTPro18x_K_F2 73.279 55.579 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14757 411 13972 28185 22603 22603 1 9606 Homo sapiens -0.10747324971680428 KPEDRPNTSEILR Unmodified 1553.8162 0.81616898 1711 A0A7P0TAL9;A0A7P0TBA9;B7ZKK7;P19525-2;P19525;A0A7P0Z4M0 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes no 0 0 2 6 0 1 37.62 37.696 4 0.0001445 8609 20230619_1886_Aki_TMTPro18x_K_F6 105.19 79.755 574780 450990 529340 565970 554020 617350 626700 603310 690840 679390 730920 714700 793000 647820 619340 801440 781300 734280 531000 413910 542140 562810 575620 620040 629680 619430 701810 683660 750470 721960 799040 678570 642770 798650 745650 698310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 556360000 14758 1711 13973 28186 22604;22605 22605 2 9606 Homo sapiens 0.0614135428688769 KPEDVLDDDDAGSAPLK Unmodified 1783.8476 0.84758827 1707 B4DY23;A0A7P0TA85;Q54A51;B4DNE1;P35613-2;P35613;A0A087WUV8;P35613-3;P35613-4;A8MZ77 hEMMPRIN;BSG Basigin yes no 0 0 1 4 0 1 51.255 51.282 3 0.07139 14602 20230619_1883_Aki_TMTPro18x_K_F4 40.724 23.235 27360 24888 27481 29684 30595 32940 32614 36014 36264 36552 42393 43285 43031 39449 39051 46042 41036 51810 25318 22818 27967 29634 31580 33135 32894 36582 36981 37109 43240 43523 43724 41160 39933 46462 39318 49108 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33416000 14759 1707 13974 28187 22606 22606 1 9606 Homo sapiens -0.01298162260331992 KPEDWDEEMDGEWEPPVIQNPEYK Oxidation (M) 2975.2807 0.28073406 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;K7EJB9;B4E2Y9 CALR;HEL-S-99n Calreticulin yes no 0 1 1 4.33 0.943 1 2 59.78 59.825 3;4 3.6241E-13 18302 20230619_1882_Aki_TMTPro18x_K_F3 133.1 116.83 47251 38950 43159 48262 48790 56440 48270 51105 56441 60468 61447 63750 64113 54167 62364 61102 64325 72469 43663 35736 44299 48075 50260 56324 48970 52817 57272 60702 62948 64223 65259 56580 63550 61931 61583 68681 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 214540000 14760 1691 13975 28188;28189;28190 22607;22608;22609 22607 1103 3 9606 Homo sapiens -0.12789508236483016 KPEDWDEEMDGEWEPPVIQNPEYK Unmodified 2959.2858 0.28581943 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;K7EJB9;B4E2Y9 CALR;HEL-S-99n Calreticulin yes no 0 0 1 4 2 1 1 1 1 1 1 1 61.606 61.632 4 0.0091912 19143 20230619_1882_Aki_TMTPro18x_K_F3 57.432 41.29 67016 43799 58913 66618 49486 61196 52364 67436 70662 63616 68090 61758 73885 61974 67340 70315 71044 77991 61828 40316 60418 65308 52335 62391 53264 68330 70834 64448 70187 62832 74907 64387 68813 70947 67987 73969 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 773020000 14761 1691 13975 28191;28192;28193;28194;28195;28196;28197 22610 22610 1 9606 Homo sapiens -0.11545204373896922 KPEDWDERPK Unmodified 1298.6255 0.62551466 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2;A0A7P0Z484;A0A7P0TAR9;Q16094;Q6ZP56 CANX Calnexin yes no 0 0 2 4.5 1.12 1 1 1 1 39.725 39.794 4 0.02396 9434 20230619_1883_Aki_TMTPro18x_K_F4 66.267 50.88 245260 178110 232510 235380 264710 330070 290520 286890 434860 274550 303950 370760 342680 290320 327910 314790 320270 351300 226520 163610 237830 234190 273700 325420 295700 295710 429090 281420 320160 369080 347840 303390 333210 318070 306720 333160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 557050000 14762 1700 13976 28198;28199;28200;28201 22611 22611 1 9606 Homo sapiens -0.011853073045585916 KPEEEEEEELEETAQEK Unmodified 2074.9066 0.90661929 3267 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 0 0 1 1 0 1 50.404 50.404 3 0.00014743 14521 20230619_1880_Aki_TMTPro18x_K_F1 89.344 79.286 29507 23235 28217 29856 89063 30791 35834 32042 35466 39259 37282 35281 43161 49662 30293 47342 35564 41628 27268 21329 29596 29622 85732 31286 39190 32848 36347 39185 38399 36506 43340 50568 31419 47252 34018 39577 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40209000 14763 3267 13977 28202 22612 22612 1 9606 Homo sapiens -0.08783775547271944 KPEMFETAIK Unmodified 1192.6162 0.61619553 2144 X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9 GTF2I General transcription factor II-I yes no 0 0 1 1 0 1 51.183 51.183 3 0.0016161 14834 20230619_1880_Aki_TMTPro18x_K_F1 86.911 61.525 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14764 2144 13978 28203 22613 22613 1 9606 Homo sapiens 0.027592080855583845 KPEPDAREEQPTGPPAESR Unmodified 2090.0029 0.0028601316 4106 Q6GQQ9-2;Q6GQQ9 OTUD7B OTU domain-containing protein 7B yes no 0 0 2 3 0 1 34.842 34.903 4 0.00026313 7558 20230619_1882_Aki_TMTPro18x_K_F3 73.21 63.289 11756 8731.5 12405 12874 18741 20708 15578 15500 20650 15560 17301 15059 17788 13776 18130 15026 15549 13751 10869 8029.7 12646 12754 18888 20219 16041 16189 20605 15724 17916 15274 18143 14323 18269 15022 14889 13081 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21044000 14765 4106 13979 28204 22614 22614 1 9606 Homo sapiens 0.001458815939258784 KPESFFTQFDAVCLTCCSR Unmodified 2352.0337 0.033708029 107 A0A024R0R4;Q9UBE0;B3KNJ4;Q9UBE0-2;Q9UBE0-3;A0A590UK93;A0A590UKC5;M0QX65;M0QYM8;M0R054;M0R286;M0QYP2 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes no 0 0 1 2.5 0.5 1 1 61.523 61.544 3 2.018E-07 19306 20230619_1881_Aki_TMTPro18x_K_F2 112.32 108.83 50838 39259 47783 47905 37589 40780 44139 47315 49597 50944 42565 50756 55489 48677 49505 64368 56225 66477 46969 36023 48633 47596 40033 41937 44325 47986 49983 51276 44632 51461 55962 51111 50902 64499 53802 63080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98200000 14766 107 13980 28205;28206 22615;22616 22615 2 9606 Homo sapiens -0.08822747679323584 KPEVGGVIR Unmodified 953.56581 0.56581494 4721 Q9Y3B7;Q9Y3B7-3;E9PQB6 MRPL11 39S ribosomal protein L11, mitochondrial yes no 0 0 1 1 0 1 40.124 40.124 3 0.013914 10137 20230619_1880_Aki_TMTPro18x_K_F1 68.485 37.063 289640 233750 253750 292460 368760 368990 350270 347970 414590 341930 390650 359310 404490 322930 323830 369230 397510 392340 267520 214500 262700 291480 373290 366910 356100 356710 417580 346580 402220 362930 408460 336900 335020 371470 379590 372420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177710000 14767 4721 13981 28207 22617 22617 1 9606 Homo sapiens 0.08717466542759666 KPFEEHWR Unmodified 1127.5512 0.55122751 21 A0A024QZ30;P31040;P31040-2;D6RFM5;B3KT34;P31040-3;B3KYA5;B4DNB2 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 1 7.5 0.5 1 1 39.836 39.863 4 0.00085547 9195 20230619_1887_Aki_TMTPro18x_K_F7 130.56 103.67 302830 251730 320530 351160 352530 376400 367130 364370 408690 379290 395770 419070 431510 355830 386330 415920 460420 452850 280180 231250 324800 346690 363880 378380 370640 373530 413500 383760 408400 421440 437120 372410 397880 418990 439750 429760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150920000 14768 21 13982 28208;28209 22618;22619 22618 2 9606 Homo sapiens -0.007446056053822758 KPFPDFVYK Unmodified 1139.6015 0.60153174 1284 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q8NAN9 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 0 0 1 3 0.816 1 1 1 55.554 55.579 3 0.00083521 16566 20230619_1882_Aki_TMTPro18x_K_F3 96.015 64.376 1003000 821310 915700 1037500 815390 900390 1040400 990440 1064000 1246400 1193300 1172700 1262600 1147700 1190100 1358400 1289600 1310800 926760 753710 936730 1028200 860930 923070 1036900 1012800 1088700 1243300 1221300 1193200 1283500 1195600 1217900 1358600 1233100 1245500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3943499999.9999995 14769 1284 13983 28210;28211;28212 22620 22620 1 9606 Homo sapiens 0.03731503999733832 KPFSQHVR Unmodified 997.54575 0.5457482 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3;F8VZ45;U3KQR5;F8VR69 RPL6 60S ribosomal protein L6 yes no 0 0 1 7 0 1 32.005 32.098 4 0.0010141 6197 20230619_1887_Aki_TMTPro18x_K_F7 124.08 85.058 78006 63233 68944 64346 100390 121670 90166 85386 131370 33504 39379 41399 37063 30576 41684 31019 39455 44619 72056 57915 71254 65654 101700 117820 92666 88329 127510 37110 44650 41329 38158 31943 42124 31959 37807 42216 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32008000 14770 680 13984 28213 22621 22621 1 9606 Homo sapiens 0.04687715602801745 KPFTPVK Unmodified 815.49052 0.49052473 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2;K7EPH2;K7ERS0 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 1 4 0 1 43.447 43.491 3 0.024031 11042 20230619_1883_Aki_TMTPro18x_K_F4 62.546 22.443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14771 4109 13985 28214 22622 22622 1 9606 Homo sapiens 0.07539909082333907 KPGDLSDELR Unmodified 1128.5775 0.57750184 3850 Q13435;E9PPJ0;Q7Z3K9;H0YEX5 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 1 4 0.816 1 1 1 43.439 43.503 3 0.079573 11121 20230619_1883_Aki_TMTPro18x_K_F4 42.041 21.14 85655 59783 69422 72130 74080 82107 83009 79746 102260 77617 83208 79981 89778 75204 77835 89969 87333 84717 79006 54873 71960 71974 76891 82218 83749 81581 102250 78688 86525 80970 90859 78511 79948 89850 83449 80530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1088200000 14772 3850 13986 28215;28216;28217 22623 22623 1 9606 Homo sapiens 0.018356187754079656 KPGGFDISLFYR Unmodified 1398.7296 0.7295858 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 1 4.5 0.5 1 1 59.879 59.906 3 3.9018E-07 17828 20230619_1885_Aki_TMTPro18x_K_F5 157.52 140.19 950580 819470 780380 893350 729300 1152900 608580 1341400 608440 810860 718220 675840 732350 582940 550970 969590 476980 755650 877970 750820 806910 899990 761630 1149400 623230 1340500 625620 842360 731850 690240 737860 624810 561900 954800 459010 718970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 703630000 14773 150 13987 28218;28219 22624;22625 22625 2 9606 Homo sapiens 0.0461701952299336 KPGIFPK Unmodified 785.47996 0.47996005 1769 Q4G0J3-3;A0A8I5KUI4;Q4G0J3;A0A8Q3SHG9;A0A8Q3SHN7;H0YA82;A0A8Q3SHF1;A0A8Q3SHH4;A0A8Q3WK75;A0A8I5KSZ3;A0A8I5KQG7;A0A8I5KYN2;D6RFF0;A0A8Q3SHL6 LARP7 La-related protein 7 yes no 0 0 1 5 0 1 45.867 45.944 3 0.021435 12027 20230619_1885_Aki_TMTPro18x_K_F5 66.258 10.541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14774 1769 13988 28220 22626 22626 1 9606 Homo sapiens 0.0786392642789906 KPGLEEAVESACAMR Unmodified 1646.7756 0.77562607 2081 A8K5W7;Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 1 6.5 0.5 1 1 51.264 51.341 3 1.1102E-05 14504 20230619_1886_Aki_TMTPro18x_K_F6 113.66 97.258 120040 80570 103300 114740 97645 116430 127570 131730 135560 146800 142630 146240 161350 139020 131390 175970 148190 173730 110740 74097 106330 113080 102770 117900 127160 133900 138010 147500 146830 148290 162670 145590 135320 175970 141800 164940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357290000 14775 2081 13989 28221;28222 22627 22627 1 9606 Homo sapiens -0.02189071419411448 KPGMFFNPEESELDLTYGNR Oxidation (M) 2359.0791 0.079061542 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 1 1 6 0 1 57.667 57.735 3 4.2251999999999996E-21 17163 20230619_1886_Aki_TMTPro18x_K_F6 175.56 172.34 71777 54684 62145 70035 91494 89780 79136 78078 85566 91806 111070 119040 101130 92971 122500 113690 99593 136160 66268 50204 64404 69704 92317 89045 80715 80943 87845 92856 112430 118720 104550 97841 122890 115190 95765 128950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184370000 14776 1464 13990 28223 22628 22628 969 1 9606 Homo sapiens -0.04611482620930474 KPGMFFNPEESELDLTYGNR Unmodified 2343.0841 0.08414692 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 1 6 0 1 60.719 60.777 3 2.8216E-22 18426 20230619_1886_Aki_TMTPro18x_K_F6 175.01 170.39 88290 78161 81656 87349 71053 102370 105340 93096 108260 128180 121140 143620 148480 117770 136490 139180 129690 168820 81630 71623 83426 87673 75744 102130 104290 96716 110750 128100 125060 144120 150020 123550 138650 141170 124420 159890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93426000 14777 1464 13990 28224 22629 22629 1 9606 Homo sapiens -0.0336717875834438 KPGPSGPSESPK Unmodified 1166.5932 0.5931519 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 1 8 0 1 36.466 36.453 3 0.00056449 8054 20230619_1888_Aki_TMTPro18x_K_F8 97.69 69.677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14778 4372 13991 28225 22630 22630 1 9606 Homo sapiens 0.01651905292465017 KPGQSFQEQVEHYR Unmodified 1731.8329 0.83288168 3231 O15042-2;O15042;E7ET15;O15042-3;H7C4V2 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 0 0 1 7.33 0.471 2 1 41.192 41.239 3;4 6.376999999999999E-22 9977 20230619_1888_Aki_TMTPro18x_K_F8 220.85 212.36 73092 53642 70950 80933 73214 100790 81251 76837 98596 83698 92593 90746 92495 82039 85912 91999 96157 105990 67526 49347 72374 79682 76271 99772 81985 80356 99168 84498 95263 91524 94123 85447 88079 93057 91971 100480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 361720000 14779 3231 13992 28226;28227;28228 22631;22632 22632 2 9606 Homo sapiens -0.0037614482714616315 KPHDCVPTR Unmodified 1108.5448 0.54476192 1010 A0A0C4DGU2;Q9Y4U1 MMACHC Methylmalonic aciduria and homocystinuria type C protein yes no 0 0 1 8 0 1 29.889 29.904 4 0.0047835 5626 20230619_1888_Aki_TMTPro18x_K_F8 81.017 68.78 20314 11631 21351 18430 19598 21154 21163 22030 25783 22921 32760 22619 25921 23453 23213 16214 27620 23051 18757 10719 21557 18091 20537 21196 21406 22462 26249 23117 32907 23025 26549 23790 23854 16822 26353 21838 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5944700 14780 1010 13993 28229 22633 22633 1 9606 Homo sapiens -0.005168668284341038 KPHTLLQR Unmodified 991.5927 0.59269839 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 1 4.5 0.5 1 1 33.915 33.984 3 0.012449 7140 20230619_1885_Aki_TMTPro18x_K_F5 72.928 59.55 27099 24764 29782 25699 56652 97339 37329 42601 101270 12164 14567 17465 15887 13741 16691 12528 17966 13025 25096 22675 30453 26770 56618 91623 40643 46418 95802 14341 19079 17377 16261 14227 17003 12655 17143 12384 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14774000 14781 1182 13994 28230;28231 22634 22634 1 9606 Homo sapiens 0.09656575153940139 KPIDSLR Unmodified 827.4865 0.48650199 1230 Q9UQ35;A0A140VK53;Q9UQ35-2;Q5JPB4;I3L4U6 SRRM2;DKFZp667L0421 Serine/arginine repetitive matrix protein 2 yes no 0 0 1 1 0 1 39.071 39.071 3 0.07926 9687 20230619_1880_Aki_TMTPro18x_K_F1 51.864 24.128 344280 258610 360900 374070 457400 505980 419330 470400 567550 479040 579700 480950 530510 423910 430510 467080 615150 513790 318310 237760 366770 369880 466660 500650 429700 482930 569900 483930 591150 486580 538220 441680 449870 471220 586090 487880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 377160000 14782 1230 13995 28232 22635 22635 1 9606 Homo sapiens 0.06585819588622144 KPITDDDVDR Unmodified 1172.5673 0.56733108 3646 P53618 COPB1 Coatomer subunit beta yes yes 0 0 1 2 0.816 1 1 1 37.703 37.741 3 0.003584 8658 20230619_1882_Aki_TMTPro18x_K_F3 76.533 56.152 89020 59414 83300 86688 103290 118380 110720 108430 137830 111500 125330 121840 129490 116760 96042 102910 150480 131580 82176 54657 85437 85686 105990 117020 112000 111520 138290 112910 129280 123020 130540 119900 101280 105240 143320 124740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 462820000 14783 3646 13996 28233;28234;28235 22636 22636 1 9606 Homo sapiens -0.012049889498257471 KPITTGGVTYR Unmodified 1191.6612 0.66117189 3098 Q53T40;I0CE67;Q6I9R8;Q2TSB7;Q2XQU9;Q14192 FHL2;AAG11 Four and a half LIM domains protein 2 yes no 0 0 1 4.5 0.5 1 1 39.711 39.777 3 0.033312 9476 20230619_1883_Aki_TMTPro18x_K_F4 45.28 17.659 61275 51191 66155 74179 122630 148370 92341 98540 115760 95860 111360 107740 109870 87976 88921 118660 129860 114350 56704 47045 67718 73901 122220 143170 95562 103960 116410 97464 114340 108240 111190 93033 93206 118420 123750 108710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142210000 14784 3098 13997 28236;28237 22637 22637 1 9606 Homo sapiens 0.07300774943132637 KPLEAVLR Unmodified 924.57565 0.57565135 2900;4026 E7ESY4;Q13330-3;Q13330;A0A024R6P5;H0Y4T7;F8W9Y9;Q59FW1;Q9BRL8 MTA1 Metastasis-associated protein MTA1 no no 0 0 1 2.5 0.5 1 1 46.015 46.094 3 0.046584 12673 20230619_1881_Aki_TMTPro18x_K_F2 57.96 26.025 154640 159280 165500 172870 149990 189100 162320 162400 187850 138120 142720 116640 127810 105480 163100 139030 142710 116700 143310 145850 167050 173720 157540 189370 163780 167130 187970 140350 147810 119150 132570 110950 163960 138020 136560 111170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 286450000 14785 2900;4026 13998 28238;28239 22638 22638 1 9606 Homo sapiens 0.11034654548132039 KPLFFGEGTVLR Unmodified 1362.766 0.76597131 1423 B3KXN5;A0A6Q8PHB5;A8K6K2;A0A384MED8;A0A6Q8PHP0;P49902-2;P49902 NT5C2 Cytosolic purine 5'-nucleotidase yes no 0 0 1 4 0 1 55.825 55.833 3 0.0018312 16581 20230619_1883_Aki_TMTPro18x_K_F4 82.102 60.43 167110 128880 184040 199030 158930 156830 183520 171130 166840 214490 229290 241610 235580 204330 211400 266970 269300 305910 154600 118570 185220 194610 167450 162120 183220 175150 173590 215140 232680 242810 239150 215350 218910 269240 257360 290000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280570000 14786 1423 13999 28240 22639 22639 1 9606 Homo sapiens 0.09909896419685538 KPLFHGDSEIDQLFR Unmodified 1800.9159 0.91588303 56 A0A024QZP7;Q5H9N4;P06493;I6L9I5;A0A024QZJ8;P06493-2 CDC2;DKFZp686L20222;CDK1 Cyclin-dependent kinase 1 yes no 0 0 1 8 0 1 55.538 55.6 4 4.6353999999999994E-52 15984 20230619_1888_Aki_TMTPro18x_K_F8 261.78 233.69 491170 459070 493230 485920 474550 581890 481120 455770 625300 564190 485250 451370 523210 417220 522030 539660 492020 527340 454590 420390 500560 489950 495280 578330 489210 477250 623440 561280 505960 462200 532560 438240 529320 539600 471300 500870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165110000 14787 56 14000 28241 22640 22640 1 9606 Homo sapiens 0.04746171900842455 KPLLESGTLGTK Unmodified 1242.7184 0.71835242 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 1 2 0 1 48.864 48.929 4 1.5307E-05 13935 20230619_1881_Aki_TMTPro18x_K_F2 134.08 74.534 159660 158400 148050 183820 182080 188220 216500 175160 191280 228080 227770 255600 230490 209820 226270 206000 238640 251740 147740 145140 152120 183580 187160 189780 215400 181420 197930 228430 232350 256430 235020 217740 230730 209730 228300 238570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 578980000 14788 134 14001 28242 22641 22641 1 9606 Homo sapiens 0.10670197428862593 KPLPDHVSIVEPK Unmodified 1457.8242 0.82421447 3494 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;Q9NQS8;E9PPU1;E9PSF4 RPS3 40S ribosomal protein S3 yes no 0 0 1 8 0 1 46.105 46.143 4 5.0676E-06 11966 20230619_1888_Aki_TMTPro18x_K_F8 114.74 88.618 137540 100500 141410 167670 137480 178010 158820 165100 173590 169340 182250 188940 171940 149010 156760 187960 186860 226830 127120 92570 143460 163800 143880 178750 159410 169700 176330 171490 186170 189570 175130 157130 161530 190310 178770 214890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 111890000 14789 3494 14002 28243 22642;22643 22643 2 9606 Homo sapiens 0.11361533274316571 KPLPGNAEEQPSLYEK Unmodified 1798.9101 0.91012895 2548 B4DN33;Q53FP2 TMEM35 Transmembrane protein 35 yes no 0 0 1 6 0 1 47.967 48.046 3 0.00062698 13026 20230619_1886_Aki_TMTPro18x_K_F6 76.85 57.011 15847 12310 14449 18186 11669 14873 34729 31367 36184 23606 31377 39748 26614 32031 36381 28594 31879 40664 14638 11319 14800 17848 12963 15649 33683 30707 36500 24764 32293 39333 27840 33075 36535 29494 30606 38463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26273000 14790 2548 14003 28244 22644 22644 1 9606 Homo sapiens 0.04263028598506935 KPLTPYFR Unmodified 1020.5757 0.57565135 2929 E9PKP7;P17480-2;P17480;A0A994J4N4;A8K962;B4DNQ1;Q05BZ1;E9PMM2;Q9BQR2 UBTF Nucleolar transcription factor 1 yes no 0 0 1 5.5 0.5 1 1 46.355 46.435 3 0.039812 12314 20230619_1886_Aki_TMTPro18x_K_F6 60.892 42.353 326150 272150 264750 323680 356830 424530 388840 388210 416050 240060 251740 219410 230960 200970 296780 262570 248470 177200 301150 249580 275890 323900 364580 420670 390800 395080 415180 250250 265090 223390 239580 211020 297750 258260 237710 169480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 248540000 14791 2929 14004 28245;28246 22645 22645 1 9606 Homo sapiens 0.06618654548128688 KPLTSNCTIQIATPGK Unmodified 1727.924 0.92400487 3916 Q15061;C9IZK7 WDR43 WD repeat-containing protein 43 yes no 0 0 1 4 0 1 49.174 49.212 3 1.0151E-05 13628 20230619_1883_Aki_TMTPro18x_K_F4 105.31 89.722 36587 30298 35439 37844 33211 42736 35392 40687 39826 50562 49878 48136 54732 39609 36586 57014 54824 52652 33825 27800 36081 37662 34787 42781 35732 41950 40778 50468 50875 48704 54808 42089 38641 56705 52264 50064 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66427000 14792 3916 14005 28247 22646 22646 1 9606 Homo sapiens 0.08915982825942592 KPLTSSSAAPQRPISTQR Unmodified 1924.049 0.049022463 2536 Q15691;B4DM33;A2VCR0 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes no 0 0 2 7 0.707 1 2 1 35.381 35.427 3;4 1.9084999999999998E-23 7745 20230619_1886_Aki_TMTPro18x_K_F6 160.27 122.09 292920 226820 256150 265620 256950 306270 286000 270320 322130 358000 379870 364290 376650 300480 318260 418280 409850 362400 270480 208040 263360 265630 267910 305800 287860 281020 328570 357260 386720 367510 381660 318280 330250 415020 390930 344980 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1570899999.9999998 14793 2536 14006 28248;28249;28250;28251 22647;22648;22649;22650 22647 4 9606 Homo sapiens 0.12395991286689423 KPLTTTPR Unmodified 912.53927 0.53926584 3896 Q14684;Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 1 3.5 0.5 1 1 34.816 34.871 3 0.010687 7457 20230619_1883_Aki_TMTPro18x_K_F4 71.451 39.516 191970 103380 196900 207560 250150 272230 225130 238280 270760 156360 228640 216470 207180 179860 211880 106240 244860 203150 177170 95627 200460 201680 254970 269380 229870 243560 271110 164460 235570 215730 212410 182940 216570 113750 233670 192080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 90758000 14794 3896 14007 28252;28253 22651 22651 1 9606 Homo sapiens 0.07949777651413115 KPMGPAHWEK Oxidation (M) 1195.5808 0.58081308 3120 I6L9E8;Q8NCA5;A0A8I5KR56;A0A8I5QKV5;A0A8I5KZA5;E9PH82;B4DY25 FAM98A Protein FAM98A yes no 0 1 1 2 0 1 38.476 38.539 4 0.0057977 9149 20230619_1881_Aki_TMTPro18x_K_F2 78.342 46.848 56641 42462 51888 58956 70405 79615 62261 64876 75467 51524 53628 51601 58489 39461 58264 55786 59002 51227 52310 39020 53427 58418 71494 78573 63644 66923 75215 52838 56260 52001 59470 42010 59273 55552 56392 48732 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36214000 14795 3120 14008 28254 22652 22652 1813 1 9606 Homo sapiens -0.009154096515658239 KPMVLGHEASGTVEK Oxidation (M) 1597.8134 0.81339179 3775 V9HW89;Q00796;A0A6I8PIS1;H0YKB3;Q00796-2 HEL-S-95n;SORD Sorbitol dehydrogenase yes no 0 1 1 7.5 0.5 1 1 40.002 40.029 4 4.0762E-05 9256 20230619_1887_Aki_TMTPro18x_K_F7 105 84.893 319160 251090 284200 325710 358730 359070 357880 316770 361080 338450 389430 398620 354190 325310 342410 374990 410130 394600 294780 230520 292950 323140 366420 359680 360900 327320 368720 342770 396780 399450 362270 340480 352310 377060 391650 374640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 223380000 14796 3775 14009 28255;28256 22653;22654 22653 2458 2 9606 Homo sapiens 0.038397628376969806 KPMVLGHEASGTVEK Unmodified 1581.8185 0.81847717 3775 V9HW89;Q00796;A0A6I8PIS1;H0YKB3;Q00796-2 HEL-S-95n;SORD Sorbitol dehydrogenase yes no 0 0 1 7.5 0.5 1 1 42.093 42.132 4 0.00042652 10170 20230619_1887_Aki_TMTPro18x_K_F7 90.367 75.101 23970 21830 28204 28113 30195 29501 37707 27754 36114 30798 37751 33693 29700 24024 33346 29977 31318 31179 22212 20030 28332 27894 31349 29697 37509 28590 36907 31057 38286 33755 30727 25420 33715 30109 29984 29601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191780000 14797 3775 14009 28257;28258 22655 22655 1 9606 Homo sapiens 0.05084066700328549 KPNATRPVTPPR Unmodified 1332.7626 0.76261727 685 A0A024RBP2;F8W0W8;P36873;P36873-2;B4DNE3 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit yes no 0 0 2 7 0 1 31.873 31.966 4 0.023076 6108 20230619_1887_Aki_TMTPro18x_K_F7 64.827 43.925 30057 23589 32054 31348 32792 33670 31514 37435 47409 34313 42591 41727 44914 32423 35298 48246 48975 48498 27802 21663 32396 31059 33974 33957 32359 37884 47156 35086 44002 41748 45287 34610 36889 48197 46723 46063 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14430000 14798 685 14010 28259 22656 22656 1 9606 Homo sapiens 0.10954646365667031 KPNEGADGQWK Unmodified 1228.5836 0.58364985 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 1 6.5 0.5 1 1 41.26 41.343 4 0.0062324 9838 20230619_1887_Aki_TMTPro18x_K_F7 71.555 41.866 36643 29641 35532 39086 34716 46943 42578 40222 51323 53077 49088 50270 54099 45297 48564 47155 54398 45852 33872 27215 36211 38786 36415 46692 42738 41899 51726 52876 50696 50958 54790 46993 49789 47300 51932 43596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95781000 14799 4246 14011 28260;28261 22657 22657 1 9606 Homo sapiens -0.021498629930420066 KPNFEVGSSR Unmodified 1119.5673 0.5672715 4103 Q6FI81-3;Q6FI81;H3BV90;H3BT65;H3BUG4;B4DHB9;H3BPG7 CIAPIN1 Anamorsin yes no 0 0 1 1.5 0.5 1 1 40.315 40.352 3 0.00058888 9972 20230619_1881_Aki_TMTPro18x_K_F2 86.463 60.399 457340 336140 396680 466780 477180 519460 455610 473740 560180 549690 588560 608930 561400 444730 495690 659080 640600 585320 422160 308920 409610 461130 488970 520160 463950 489160 565960 553210 601370 610030 570640 475470 514100 654240 611140 556920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 653860000 14800 4103 14012 28262;28263 22658 22658 1 9606 Homo sapiens 0.012270558408772558 KPNVGCQQDSEELLK Unmodified 1743.8461 0.84614848 1889 A1LT96;A0AVT1;B3KSS1;A0AVT1-3 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 1 5.5 0.5 1 1 46.651 46.731 3 2.5286E-11 12469 20230619_1886_Aki_TMTPro18x_K_F6 167.29 129.33 71904 57745 70198 74215 67625 82758 88537 74421 84355 100510 92599 89844 104110 88875 83953 114860 102700 112340 66467 53006 71462 73699 71040 82826 87904 77334 86594 99844 95098 91686 104950 93096 86934 114770 98145 106690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91101000 14801 1889 14013 28264;28265 22659 22659 1 9606 Homo sapiens 0.0039792516995476035 KPPEFEGGESLSSGNLCQR Unmodified 2090.9691 0.96911716 1671 A0A7I2YQC1;A0A7I2V550;X5DNR8;B4DIB3;Q9P0L2-2;Q9P0L2-3;Q9P0L2;X5D7J4;X5D2M4;A0A087X0I6 MARK1 Serine/threonine-protein kinase MARK1 yes no 0 0 1 6 0 1 46.94 47.023 3 1.7273E-08 12586 20230619_1886_Aki_TMTPro18x_K_F6 111.77 105.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14802 1671 14014 28266 22660 22660 1 9606 Homo sapiens -0.03272863169422635 KPPGTVAGTAR Unmodified 1053.5931 0.59309232 333 E7EN32;A0A024R5E3;A0A024R5D2;A0A5F9ZHS3;O00255-2;O00255;Q9UE24;A0A8C8KI72;A0A024R570;O00255-3;G9G6R5 MEN1 Menin yes no 0 0 1 3 0 1 33.035 33.107 3 0.019739 6814 20230619_1882_Aki_TMTPro18x_K_F3 62.894 34.382 28505 15820 30327 34438 54083 55754 42792 42379 48515 23735 32555 31866 25116 25362 35979 17518 32490 24470 26318 14652 31037 33473 53961 54419 43951 43714 48382 25287 33846 31757 26417 25947 36095 18188 31064 23198 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12563000 14803 333 14015 28267 22661 22661 1 9606 Homo sapiens 0.06843950083134587 KPPLLNNADSVQAK Unmodified 1493.8202 0.82019173 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 1 1.33 0.471 2 1 47.052 47.09 3 9.6361E-07 13003 20230619_1881_Aki_TMTPro18x_K_F2 128.73 101.59 99179 83398 86909 106770 113960 126500 110280 109290 110540 118900 135520 126600 125730 111580 126230 146690 130440 120070 91630 76536 89837 106110 116140 126020 111420 113100 113630 119880 137400 127750 128670 117370 128700 145310 124700 114360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 611150000 14804 261 14016 28268;28269;28270 22662;22663 22663 2 9606 Homo sapiens 0.09303443780595444 KPPTDEELK Unmodified 1055.5499 0.5498901 3032 H0Y993;P35659;B4DFG0;A0A494C028;P35659-2;B4DNW3;A0A494C198 DEK Protein DEK yes no 0 0 1 3.5 0.5 1 1 40.925 40.975 3 0.0010001 9904 20230619_1883_Aki_TMTPro18x_K_F4 100.69 59.498 592640 360430 535450 543850 629010 670250 599000 617940 723170 701610 790190 755230 896890 718600 593590 559310 960790 832980 546690 331860 550080 535620 645280 666810 609710 636990 732490 706380 811570 762610 897510 734740 628870 580150 914840 788740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 654570000 14805 3032 14017 28271;28272 22664;22665 22665 2 9606 Homo sapiens 0.02433715515167023 KPQAILEEK Unmodified 1054.6023 0.60226003 4233 Q8N556-2;Q8N556;Q6ZRV0 AFAP1 Actin filament-associated protein 1 yes no 0 0 1 7 0 1 45.622 45.709 3 0.001119 11603 20230619_1887_Aki_TMTPro18x_K_F7 91.855 61.417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14806 4233 14018 28273 22666 22666 1 9606 Homo sapiens 0.07714298648784279 KPQLDVTR Unmodified 955.54508 0.5450795 3912 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog yes yes 0 0 1 1 0 1 39.551 39.551 3 0.066061 9911 20230619_1880_Aki_TMTPro18x_K_F1 49.527 14.016 231360 202870 202110 215200 288520 319470 284010 272760 341800 79859 74478 64160 80113 56158 142960 84251 110190 55233 213810 185820 209160 217730 292880 314060 288090 276690 333460 91093 89341 65815 84620 59700 142100 82789 105370 52970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113660000 14807 3912 14019 28274 22667 22667 1 9606 Homo sapiens 0.06552876163095789 KPSDEEFASR Unmodified 1164.5411 0.54111633 785 Q14155-5;A0A8V8TQ72;Q14155-1;A0A2R8YG42;B7Z6G2;B1ALK7;A0A024RDY9;Q14155;Q14155-3;A0A2X0SF98;Q14155-2;Q14155-6;E9PDQ5;B7Z344 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes no 0 0 1 3.5 0.5 1 1 37.338 37.387 3 0.00035036 8534 20230619_1882_Aki_TMTPro18x_K_F3 95.498 84.554 95559 74900 96804 104050 113890 118150 101220 102730 137780 117160 133380 138670 135530 121800 109380 136340 160650 139240 88347 68817 98514 102830 116610 118050 103940 106420 138060 118360 137140 139230 137120 126920 114650 136870 153060 132300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123600000 14808 785 14020 28275;28276 22668 22668 1 9606 Homo sapiens -0.034572581212842124 KPSISITTESLK Unmodified 1302.7395 0.73948179 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3;Q69YJ6;G3V3B0;Q9UKV3-3;Q9UKV3-2 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 1 2 0 1 50.473 50.525 3 9.9923E-10 14677 20230619_1881_Aki_TMTPro18x_K_F2 176.89 127.39 388090 331470 400770 397520 420110 527260 443430 457830 492230 256150 241430 173590 196270 181760 328220 248160 261940 173040 359050 303980 406420 397750 435950 521500 447200 467000 487960 267650 257380 180730 208220 190630 327300 244400 250650 165480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207580000 14809 2896 14021 28277 22669 22669 1 9606 Homo sapiens 0.10022162737686813 KPSYAEICQR Unmodified 1250.6078 0.60775611 1776 A0A8I5KWN8;A0A8I5KVU2;Q92615;H0Y4V9 LARP4B La-related protein 4B yes no 0 0 1 1 0 1 39.844 39.844 3 0.05601 10032 20230619_1880_Aki_TMTPro18x_K_F1 46.796 32.377 69205 52700 79960 85561 115680 111930 88765 105500 100720 88401 99782 98423 96227 83426 104290 84583 107620 96195 64046 48518 80876 83998 116470 111010 91484 107690 101900 90565 102290 98955 98717 86618 105970 85707 102860 91286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40222000 14810 1776 14022 28278 22670 22670 1 9606 Homo sapiens -0.007523458310743081 KPTDGASSSNCVTDISHLVR Unmodified 2143.0328 0.032780052 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;P49321-2;Q5T626;Q5T624;Q9P1N1;H0YDS9 NASP Nuclear autoantigenic sperm protein yes no 0 0 1 1 0 1 46.081 46.081 4 3.903E-37 12738 20230619_1880_Aki_TMTPro18x_K_F1 238.69 217.88 67837 58815 69019 69249 62101 76866 68580 68020 66402 81454 70484 64756 85526 65935 70205 85351 77219 75095 62759 53925 69917 69188 65270 76939 68744 70454 68046 81076 72745 66564 86036 69038 72128 84842 73800 71442 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176710000 14811 3605 14023 28279 22671 22671 1 9606 Homo sapiens 0.006984972676491452 KPTEIEWR Unmodified 1057.5556 0.55564418 4320 Q96A35;X6RJ73 MRPL24 39S ribosomal protein L24, mitochondrial yes no 0 0 1 7 0 1 44.41 44.493 3 0.038746 11114 20230619_1887_Aki_TMTPro18x_K_F7 61.353 30.783 281840 210760 341730 345370 459130 421460 407230 420060 426910 394300 434700 444960 447310 380240 404050 322030 454780 420930 260930 194070 343860 338580 465320 420380 414280 428450 434170 401400 446270 446960 454060 391430 413920 330430 434400 398870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192480000 14812 4320 14024 28280 22672 22672 1 9606 Homo sapiens 0.029168588175025434 KPTHSQEPQGPEAMER Oxidation (M) 1836.8425 0.84246009 2707 B7ZKR9;O95602;Q96AG9;Q53T12;B7Z8X7;B7Z284 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 yes no 0 1 1 3 0 1 29.877 29.97 4 0.00043669 5585 20230619_1882_Aki_TMTPro18x_K_F3 89.261 78.434 39025 22826 40923 44096 62765 59321 53307 63607 48704 31760 46682 44834 35651 34482 47439 27089 50803 37581 36036 21092 41752 42952 63105 58901 54176 63792 49729 34198 47527 44586 37329 35505 48096 28003 48484 35632 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 14191000 14813 2707 14025 28281 22673;22674 22673 1626 2 9606 Homo sapiens -0.04248744603978594 KPTHSQEPQGPEAMER Unmodified 1820.8475 0.84754546 2707 B7ZKR9;O95602;Q96AG9;Q53T12;B7Z8X7;B7Z284 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 yes no 0 0 1 4 0 1 33.138 33.195 4 4.0219999999999997E-19 6810 20230619_1883_Aki_TMTPro18x_K_F4 200.71 184.41 16389 13847 15718 15829 19293 19301 18541 20946 23013 20713 20866 20843 22490 20990 20910 23024 27209 22993 15153 12693 16075 15877 19729 19298 18880 21265 23107 20954 21581 21164 22849 21747 21647 23099 25944 21855 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24736000 14814 2707 14025 28282 22675 22675 1 9606 Homo sapiens -0.030044407413470253 KPVIVFVPSR Unmodified 1140.7019 0.70191449 3312 O75643;A4FU77;B4E150;B4E0P5;Q9UNV9;A2RRQ7 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 1 6.5 0.5 1 1 50.624 50.703 3 0.0028873 14211 20230619_1886_Aki_TMTPro18x_K_F6 82.171 59.431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14815 3312 14026 28283;28284 22676;22677 22676 2 9606 Homo sapiens 0.13719161053427342 KPVIVFVPSRK Unmodified 1268.7969 0.79687751 3312 O75643;A4FU77;B4E150;B4E0P5;Q9UNV9;A2RRQ7 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 2 8 0 1 47.427 47.485 4 0.040705 12519 20230619_1888_Aki_TMTPro18x_K_F8 58.674 46.314 53617 41727 51206 47538 52143 56540 57566 50607 79739 39072 41486 35972 38893 30812 38377 40434 42144 37290 49545 38262 52209 47671 54268 56365 58369 51822 78311 40104 44212 36522 39761 32472 39251 40298 40253 35469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91442000 14816 3312 14027 28285 22678 22678 1 9606 Homo sapiens 0.17323094524590488 KPVSRPATAAAAAAGSR Unmodified 1580.8747 0.87468691 4168 Q7Z478 DHX29 ATP-dependent RNA helicase DHX29 yes yes 0 0 2 7 0 1 32.984 33.071 4 0.0002568 6560 20230619_1887_Aki_TMTPro18x_K_F7 88.176 52.952 29834 32426 34983 24863 39758 30065 35958 36158 31011 30037 33185 26111 28827 22879 29932 36048 35611 25033 27683 29610 35101 25870 40673 30219 36343 36338 31965 30550 33717 26629 29608 24396 30762 35380 33944 23932 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17257000 14817 4168 14028 28286 22679 22679 1 9606 Homo sapiens 0.10748455652060329 KPVTDAENCHLAR Unmodified 1509.7358 0.73581017 2791 CON__Q0IIK2;CON__Q29443 yes no 0 0 1 5.5 0.5 1 1 34.751 34.821 4 3.7148E-21 7539 20230619_1886_Aki_TMTPro18x_K_F6 222.56 192.54 + 67673 49264 62532 54998 103720 117820 60771 62210 97721 49586 66065 83859 60914 59543 59283 70052 79730 94163 62493 45177 64505 55867 103450 113080 64894 67036 96073 51979 69155 82726 62352 62750 61505 71535 76187 89128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64899000 14818 2791 14029 28287;28288 22680 22680 1 0.0013316969220795727 KPVTDCVISVPSFFTDAER Unmodified 2167.062 0.061954915 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-4;B4DF68;B4DZB4;B4DZP3 HSPH1 Heat shock protein 105 kDa yes no 0 0 1 1 0 1 61.567 61.567 3 0.049082 19129 20230619_1880_Aki_TMTPro18x_K_F1 43.534 35.313 50552 28581 35236 48808 32872 43419 37722 53508 60362 48941 52468 45577 54352 27693 53360 73511 50625 52440 46537 26367 37117 47522 34607 44492 38486 53804 59855 49592 54234 45919 55242 31632 54243 71878 48477 50024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128700000 14819 769 14030 28289 22681 22681 1 9606 Homo sapiens 0.02510641563912941 KPVTDCVISVPSFFTDAERR Unmodified 2323.1631 0.16306594 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-4;B4DF68;B4DZB4;B4DZP3 HSPH1 Heat shock protein 105 kDa yes no 0 0 2 2 0 1 57.903 57.918 4 1.3884E-44 17786 20230619_1881_Aki_TMTPro18x_K_F2 246.31 228.07 64836 60649 66207 58241 52046 64224 59321 64901 62013 75012 58845 49574 75555 54298 58877 81866 64699 59430 60016 55494 66880 59165 55422 64530 59531 66486 63009 74471 61186 51700 75726 57351 60611 80500 61811 56704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 286430000 14820 769 14031 28290 22682 22682 1 9606 Homo sapiens 0.05441093266654207 KPVTVSPTTPTSPTEGEAS Unmodified 1884.9317 0.93165225 4757 Q9Y6G9;B3KM42;E9PHI6;B4DDM4 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 0 0 1 5 0 1 45.148 45.226 3 0.019293 11701 20230619_1885_Aki_TMTPro18x_K_F5 49.224 44.594 51396 41232 42937 52743 43379 45547 46672 51295 57506 57905 60335 67298 68707 55279 56268 63716 61168 67747 47454 37847 44379 52220 45131 46744 47225 52190 58102 58438 62172 67459 69241 57878 57749 64101 58523 64280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108240000 14821 4757 14032 28291 22683 22683 1 9606 Homo sapiens 0.02458368836551017 KPVVDCVVSVPCFYTDAER Unmodified 2240.0606 0.060574706 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;O14992;Q7KYN0 HSPA4;HEL-S-5a;HS24/p52;HS24/P52 Heat shock 70 kDa protein 4 yes no 0 0 1 7.5 0.5 1 1 58.235 58.284 3 1.9909E-14 17061 20230619_1888_Aki_TMTPro18x_K_F8 149.94 105.14 305960 237730 282530 326250 224410 292260 320630 306990 303580 464020 365150 397740 464650 375880 337560 507380 419380 472390 282640 218400 288420 321680 240560 298320 317280 316850 313590 458210 376250 405900 464940 395540 350970 505260 400830 448850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2887900000 14822 3544 14033 28292;28293 22684;22685 22685 2 9606 Homo sapiens -0.009853157964698767 KPVVDCVVSVPCFYTDAERR Unmodified 2396.1617 0.16168573 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;O14992;Q7KYN0 HSPA4;HEL-S-5a;HS24/p52;HS24/P52 Heat shock 70 kDa protein 4 yes no 0 0 2 2 0 1 54.248 54.272 4 8.6697E-37 16257 20230619_1881_Aki_TMTPro18x_K_F2 235.56 219.58 201400 196250 194680 197670 178450 200110 197620 206170 191520 258190 227900 219910 260370 218740 236770 305660 245150 253910 186400 179620 198090 199690 187140 202430 198100 211550 197300 256850 233520 225070 263560 230250 242030 302670 234540 241680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 387430000 14823 3544 14034 28294 22686;22687 22686 2 9606 Homo sapiens 0.019451359062259144 KPWQLQGEVTAQK Unmodified 1511.8096 0.80962704 1803 A0A8Q3WK70;B3KPV5;O00566;A0A8Q3WKH7;U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes no 0 0 1 2 0 1 49.504 49.563 3 4.2674E-06 14256 20230619_1881_Aki_TMTPro18x_K_F2 131.35 84.151 132280 120710 128600 143270 145100 175150 154910 155710 168410 140700 134240 123890 153440 115560 149620 151540 159500 133440 122380 110660 131310 143240 149790 174210 156030 159990 169420 142550 140150 126340 155740 121450 152760 150690 152330 127030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84074000 14824 1803 14035 28295 22688 22688 1 9606 Homo sapiens 0.07419461126164606 KPYCNAHYPK Unmodified 1276.6023 0.6022768 157 A0A024R1S8;Q14847;A8K1D2;Q14847-2;C9J9W2;B4DIC4;B4DJI4;F6S2S5;B7ZB56;O76041-2;Q59FZ8 LASP1 LIM and SH3 domain protein 1 yes no 0 0 1 3 0 1 36.884 36.938 4 0.0031741 8328 20230619_1882_Aki_TMTPro18x_K_F3 83 55.971 98707 81254 95235 83669 130130 127960 125330 126780 129290 81380 90662 75344 74802 68435 103940 102790 104180 72707 91248 74423 97482 84960 132130 126060 126730 128310 129800 84565 94115 76692 78300 72569 105180 101070 99462 69491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83455000 14825 157 14036 28296 22689 22689 1 9606 Homo sapiens -0.02496024622882942 KPYIWEYSR Unmodified 1240.6241 0.6240581 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 1 3 0 1 49.593 49.671 3 0.05269 13983 20230619_1882_Aki_TMTPro18x_K_F3 48.981 22.019 1035100 891730 1150200 1086100 1037600 1197100 1143800 1112700 1335300 979010 986130 872580 932420 829510 1108800 1132900 1117900 845070 958280 817880 1156800 1082700 1089800 1200000 1153200 1139100 1334500 994170 1025600 890230 962260 872580 1124900 1117600 1067600 806700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 822570000 14826 3402 14037 28297 22690 22690 1 9606 Homo sapiens 0.013371033973498925 KPYPDDENLVEVK Unmodified 1544.7722 0.77223848 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B3KU93;A0A8V8TQ95;B3KTP2;A6NEC2;E9PPZ2;B7Z6T6;A0A7I2V604;A6NEC2-2 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 1 5 0.816 1 1 1 49.851 49.914 3 7.3408E-06 13933 20230619_1883_Aki_TMTPro18x_K_F4 121.31 97.75 170460 116070 161340 177490 133910 163550 173040 183140 191010 216380 257490 220720 239020 231780 234550 269870 251430 262330 157390 106830 164360 173960 142460 166780 172880 186630 196210 217000 260010 224500 244490 240610 239730 270070 240480 249200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 463600000 14827 2933 14038 28298;28299;28300 22691 22691 1 9606 Homo sapiens 0.021643250698389238 KQAEETYENIPGQSK Unmodified 1720.8268 0.82679325 782 O00410-3;O00410;A0A024RDY0;B4E0R6;E7EQT5;E7ETV3;E7EV12;E7EX05;C9J875;E7EWK4;E7ESZ1;E7ETV8;C9JZD8;C9JQT6;C9JXE0 IPO5;RANBP5 Importin-5 yes no 0 0 1 5 0 1 43.077 43.158 3 0.023668 10833 20230619_1885_Aki_TMTPro18x_K_F5 55.546 37.629 41584 49346 53173 32989 55685 33569 53961 44547 27890 51238 58608 20457 33591 18164 67551 14727 17447 9868.3 38648 45012 52932 34799 57266 34303 53742 44923 31181 50414 57407 22155 36531 18704 65035 14763 17125 9452.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38804000 14828 782 14039 28301 22692 22692 1 9606 Homo sapiens -0.004787078493336594 KQAGPASVPLRTEEEFK Unmodified 1885.9898 0.98977625 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DJ98;A0A8I5KYJ6;A0A8I5KXE2;A0A8I5KP58;A0A8I5QJM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 2 8 0 1 45.113 45.141 4 3.0729E-13 11560 20230619_1888_Aki_TMTPro18x_K_F8 153.95 120.65 95422 108230 119190 97737 115020 107280 132140 117500 76536 114420 123370 67320 58859 37384 175310 34861 32892 24202 88629 98926 118890 99856 119870 108140 130590 119250 83067 114200 121410 69508 67360 39504 167580 34952 32787 23132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87859000 14829 2389 14040 28302 22693 22693 1 9606 Homo sapiens 0.0822209527252653 KQDADSLQR Unmodified 1059.5309 0.530886 3449 P14324-2;P14324;A0A087WVN4;Q14329;B3KMW3;A0A087X1D8 FDPS Farnesyl pyrophosphate synthase yes no 0 0 1 4.5 0.5 1 1 33.001 33.071 3 0.00030173 6813 20230619_1885_Aki_TMTPro18x_K_F5 120.63 78.547 79074 40394 115080 106420 154020 147940 115110 147850 105720 72937 140720 134090 92975 92041 128310 39602 131100 100570 73221 37566 114400 102490 155540 146330 118200 148950 109420 79552 140670 131890 98143 93538 129500 44368 125200 94983 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 121760000 14830 3449 14041 28303;28304 22694 22694 1 9606 Homo sapiens 0.00350178944131585 KQDAFYK Unmodified 898.45487 0.45486751 2760 C9JRZ6;A4D1N4;Q9NX63;F8WAR4 CHCHD3 MICOS complex subunit MIC19 yes no 0 0 1 8 0 1 42.273 42.276 3 0.021687 10393 20230619_1888_Aki_TMTPro18x_K_F8 76.716 43.769 135380 101280 130100 145270 197720 194100 172040 170400 226390 138370 172230 151120 165720 133920 175020 138610 174310 140490 125070 93111 133680 143650 199240 192020 176540 174840 225100 142140 178850 152360 169750 138990 177540 139460 166550 133540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73819000 14831 2760 14042 28305 22695 22695 1 9606 Homo sapiens 0.001578268346634104 KQDEEERELR Unmodified 1330.6477 0.64770667 2097 Q6PD62;A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog yes no 0 0 2 1.5 0.5 1 1 31.254 31.286 4 0.0024023 6503 20230619_1880_Aki_TMTPro18x_K_F1 90.697 76.951 58282 41419 57010 60875 77026 63449 69839 72333 77038 67551 80918 74720 71766 65904 72720 57108 91065 76858 53837 38095 58317 59905 78062 64203 71064 73146 78195 68744 82404 75224 73629 67816 74845 58696 86854 72843 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56968000 14832 2097 14043 28306;28307 22696 22696 1 9606 Homo sapiens -0.004391276267597277 KQDFPLVK Unmodified 973.55967 0.55966693 3556 Q53Y06;P36543;P36543-3;P36543-2;C9J8H1 ATP6V1E1 V-type proton ATPase subunit E 1 yes no 0 0 1 2 0 1 48.417 48.482 3 0.049649 13734 20230619_1881_Aki_TMTPro18x_K_F2 51.268 19.333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14833 3556 14044 28308 22697 22697 1 9606 Homo sapiens 0.0718294831123103 KQDPPVTHDLR Unmodified 1304.6837 0.68369824 3503 Q6FI51;Q6FHS4;P25685;A0A7I2V3K7;P25685-2;M0QXK0;M0R080;M0R1D6;M0QZD0;M0QYT3;M0R128;A0A1B0GX60 DNAJB1 DnaJ homolog subfamily B member 1 yes no 0 0 1 5.5 0.5 1 1 33.607 33.67 4 4.7507E-05 7028 20230619_1885_Aki_TMTPro18x_K_F5 136.01 90.877 65040 50542 63649 69459 86058 91484 75801 79034 101090 84179 105430 98743 95949 84380 76113 102120 116970 95333 60111 46433 65139 68850 87359 90542 77808 81721 101650 85289 107460 99155 97345 88414 80136 101890 111370 90699 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 205350000 14834 3503 14045 28309;28310 22698;22699 22698 2 9606 Homo sapiens 0.04354374340755385 KQEAEWK Unmodified 917.46068 0.46068117 3421 P09496-2;P09496-4;P09496-3;P09496;F8WF69;C9J8P9;P09496-5 CLTA Clathrin light chain A yes no 0 0 1 6.5 0.5 1 1 40.32 40.4 3 0.011151 9422 20230619_1887_Aki_TMTPro18x_K_F7 93.429 34.079 290200 194620 327380 309740 423650 435630 392030 408250 402160 347160 423320 359670 379790 282360 451680 185140 380120 265080 268320 179230 330800 304890 431160 430200 397510 417130 409770 354520 431190 361800 391970 289000 452520 193050 363590 251350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 752680000 14835 3421 14046 28311;28312 22700 22700 1 9606 Homo sapiens -0.0013507465366728866 KQEALVAR Unmodified 913.53451 0.53451481 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 7.5 0.5 1 1 35.201 35.232 3 0.013405 7568 20230619_1888_Aki_TMTPro18x_K_F8 72.325 38.139 272160 167940 281290 290170 406230 375010 366500 355070 414460 289330 375330 412800 383820 346490 401040 227950 485770 437270 251340 154890 286860 283920 410410 372290 373200 362400 417530 299910 387670 410860 392510 353500 411140 243290 463630 413280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 178500000 14836 1022;3868 14047 28313;28314 22701 22701 1 9606 Homo sapiens 0.07428893508665624 KQEDFMTTMDANEEK Unmodified 1815.7655 0.7655149 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 1 3.5 0.5 1 1 49.549 49.606 3 1.4562E-05 13782 20230619_1883_Aki_TMTPro18x_K_F4 111.22 94.143 211120 167950 198070 199140 171470 239210 238800 236500 268900 280850 261470 286050 313000 263600 257760 332900 315500 321700 195080 154040 202000 199130 182450 238670 237810 242930 272070 281610 271010 289380 315240 276320 266680 332570 301360 305650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 240570000 14837 2337;3778;3779 14048 28315;28316 22702;22703;22704 22704 3 9606 Homo sapiens -0.10973723935262569 KQEDFMTTMDANEEK Oxidation (M) 1831.7604 0.76042952 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 1 1 3.5 0.5 1 1 44.678 44.737 3 0.0049967 11705 20230619_1883_Aki_TMTPro18x_K_F4 91.076 66.283 52831 40770 46938 44086 59290 64585 65110 63247 67035 66310 70282 69821 77421 60316 70670 81799 79056 84690 48789 37367 48350 44548 60759 63732 65357 64759 68326 66953 72274 70436 78437 63699 72507 81977 75598 80387 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57576000 14838 2337;3778;3779 14048 28317;28318 22705 22705 1449 1 9606 Homo sapiens -0.12218027797894138 KQEELVQQVR Unmodified 1255.6884 0.68844927 2349 B3KMA8;K7EIE8;O95983-2;O95983 MBD3 Methyl-CpG-binding domain protein 3 yes no 0 0 1 5.5 0.5 1 1 39.481 39.569 3 0.0013178 9319 20230619_1885_Aki_TMTPro18x_K_F5 91.313 50.03 110700 79986 94211 112980 131930 125750 124050 122520 153230 129830 152880 120880 154280 117640 119600 160680 128580 109510 102160 73528 97735 111500 133760 126130 126400 125580 154360 130610 156660 123220 155670 123720 122950 157810 122810 104630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 429100000 14839 2349 14049 28319;28320 22706;22707 22706 2 9606 Homo sapiens 0.07083258483521604 KQEFLEK Unmodified 920.49673 0.49673232 4512 Q9H444;P59074 CHMP4B;CHMP4BP1 Charged multivesicular body protein 4b;Putative charged multivesicular body protein 4B-like protein CHMP4BP1 yes no 0 0 1 7.5 0.5 1 1 44.683 44.736 3 0.0062451 11217 20230619_1887_Aki_TMTPro18x_K_F7 106.42 63.602 404050 307290 350360 393030 429460 437070 442510 443000 519590 514380 570860 528670 542710 457270 472340 582180 610860 528520 373040 282110 361800 390420 440100 438850 447790 454020 527000 516450 581670 533890 551520 480570 489770 579740 582550 502860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 347350000 14840 4512 14050 28321;28322 22708 22708 1 9606 Homo sapiens 0.0333038252319966 KQEFLEQK Unmodified 1048.5553 0.55530983 2694 E9PSI1;B7Z6C9;H0YI89;E9PQI5;E9PQ80;Q9BY43;Q9BY43-2 CHMP4A Charged multivesicular body protein 4a yes no 0 0 1 7 0 1 44.533 44.615 3 0.014696 11167 20230619_1887_Aki_TMTPro18x_K_F7 68.525 36.463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14841 2694 14051 28323 22709 22709 1 9606 Homo sapiens 0.03297439097673305 KQEILKK Unmodified 885.56475 0.56475231 4703 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 2 3 0 1 40.534 40.59 4 0.01999 9857 20230619_1882_Aki_TMTPro18x_K_F3 90.657 21.233 162390 73079 221640 231350 315480 261080 228460 275800 202630 191100 308890 277030 185260 180280 286290 68252 231280 164540 150190 68308 221550 220720 316980 261960 234900 278380 211930 200100 306470 273870 197790 183200 285060 76570 221360 155510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92439000 14842 4703 14052 28324 22710 22710 1 9606 Homo sapiens 0.11739252173845216 KQELEEICHDLEAR Unmodified 1768.8414 0.84139745 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5 MYH9 Myosin-9 yes no 0 0 1 4 0 1 53.521 53.541 4 7.519E-06 15621 20230619_1883_Aki_TMTPro18x_K_F4 119.46 109.13 108490 84135 96464 98451 100610 118690 113470 111540 125840 135760 121300 129410 151840 122740 121350 160440 130750 140990 100190 77168 99081 98537 104610 118320 114050 115070 127440 135710 126040 131450 152510 128830 124670 159420 125080 134080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 373540000 14843 148 14053 28325 22711 22711 1 9606 Homo sapiens -0.01226958972824832 KQELQPGTAYK Unmodified 1261.6667 0.6666512 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4;H7C1C4 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 1 1 0 1 41.833 41.833 3 0.0031114 10888 20230619_1880_Aki_TMTPro18x_K_F1 74.46 50.078 183930 135170 171810 186790 204000 224910 197000 205050 232520 229370 274650 267880 247530 221430 228340 251170 297850 273860 169870 124210 176110 184840 209240 224040 200200 211470 236500 231680 278540 268660 252700 231470 236480 253140 284150 259960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128540000 14844 1331 14054 28326 22712 22712 1 9606 Homo sapiens 0.04628453734926552 KQEQLTPGVVYVR Unmodified 1515.8409 0.84092717 4471 Q9BYG3;B4DSM4 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 0 0 1 2 0 1 45.191 45.273 3 0.0174 12283 20230619_1881_Aki_TMTPro18x_K_F2 62.528 31.034 285740 216840 210910 235200 265590 322920 283980 292530 348200 271260 288270 304210 301520 286800 294130 342600 326100 347710 263520 198770 221490 237220 272560 319140 287150 300280 348490 276490 299310 306850 307240 299210 301260 343540 311850 330130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 320710000 14845 4471 14055 28327 22713 22713 1 9606 Homo sapiens 0.10364034160261326 KQETPDQVGSQR Unmodified 1371.6743 0.67425577 2273 L7RTI5;B2R9M7;Q02156 PRKCE Protein kinase C epsilon type yes no 0 0 1 4.5 0.5 1 1 32.069 32.139 3 0.024232 6359 20230619_1883_Aki_TMTPro18x_K_F4 62.338 47.669 8476.1 5071.7 11951 13808 14550 17907 15537 18273 14350 11819 17990 21047 18478 17576 19564 9520.7 21226 20904 7851.1 4715.9 11907 13260 14932 17778 15581 18464 14815 12568 18336 20811 18905 17821 19908 10370 20291 19735 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16452000 14846 2273 14056 28328;28329 22714 22714 1 9606 Homo sapiens 0.003285612645868241 KQEVQAWDGEVR Unmodified 1443.7106 0.71064128 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 1 4.5 0.5 1 1 43.879 43.941 3 0.0013409 11228 20230619_1883_Aki_TMTPro18x_K_F4 86.699 69.226 259020 217590 260300 275500 285480 309730 323370 330940 352770 316190 352350 331670 363720 272420 342370 322890 336470 307050 239560 199660 264820 273950 295480 311070 324780 336160 357570 320800 361920 334090 369540 285770 348070 322890 321780 291910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 420700000 14847 1213 14057 28330;28331 22715 22715 1 9606 Homo sapiens 0.006534381612709694 KQEYLEVQR Unmodified 1191.6248 0.62478638 1103 O14964;A0A7I2V3F9;A0A7I2V5A3;A0A7I2V3Z1;A0A7I2V6E0;A0A7I2V2K2;A0A7I2V5A2;A0A7I2V3I8;A0A7I2V2D8;A0A7I2V2W5;A0A7I2V2R9;A0A7I2V3J3;A0A0S2Z4R4;A0A7I2V637;B4E1E2;A0A0S2Z4Q4;A0A7I2V307;I3L1E3 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 1 6.5 0.5 1 1 40.143 40.222 3 0.0023896 9605 20230619_1886_Aki_TMTPro18x_K_F6 90.05 47.655 249130 187060 222830 255260 276850 298420 260260 267290 353000 323530 321490 356220 353000 300460 296650 405070 395300 391370 230050 171870 229540 252640 283030 297750 266220 276690 353170 325050 332880 358260 356740 317260 308690 404260 377240 371880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 215160000 14848 1103 14058 28332;28333 22716;22717 22716 2 9606 Homo sapiens 0.036638980464203996 KQGEGVPDLVHVMR Unmodified 1563.8191 0.81914587 389 B5BUD5;B2R8E4;A0A024R6A5;P35813;P35813-3 PPM1A Protein phosphatase 1A yes no 0 0 1 8 0 1 45.838 45.877 4 0.0018123 11872 20230619_1888_Aki_TMTPro18x_K_F8 75.574 54.017 55246 43938 47101 51481 40288 49483 53450 55833 57833 60673 55248 61953 61836 51945 49356 64229 65394 70399 51013 40296 48456 51362 42798 50330 53279 56726 58597 61075 57131 62470 62322 54578 51376 64644 62448 66782 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48895000 14849 389 14059 28334 22718 22718 1 9606 Homo sapiens 0.05978906140012441 KQGGITSDQAAVISK Unmodified 1501.81 0.81002097 3983 Q53EN2;Q8N668;Q53Q75;Q8N668-2 COMMD1;C2orf5 COMM domain-containing protein 1 yes no 0 0 1 1 0 1 44.068 44.068 3 0.015951 11921 20230619_1880_Aki_TMTPro18x_K_F1 61.444 50.388 26768 18715 20161 20832 23770 27576 22703 23354 30785 26378 28608 28711 29257 22436 21225 29564 31161 24543 24678 17164 21087 20957 24420 27278 23203 24225 30808 26579 29468 28832 29451 23727 22316 29292 29672 23388 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31957000 14850 3983 14060 28335 22719 22719 1 9606 Homo sapiens 0.07918836055364409 KQGGLGPMNIPLVSDPK Oxidation (M) 1765.9397 0.93965493 1476 A0A384NPQ2;Q06830;A0A0A0MSI0;B2R4P2 PRDX1 Peroxiredoxin-1 yes no 0 1 1 2 0 1 51.916 51.955 3 0.0066183 15242 20230619_1881_Aki_TMTPro18x_K_F2 74.141 59.213 200800 164580 220180 233710 237820 238460 240890 218970 201940 264240 296440 255960 247760 185960 256120 234580 216370 210860 185820 151230 222370 230330 245320 240350 241610 226360 211900 264180 297350 257900 254500 196780 257990 233730 207370 200550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 131960000 14851 1476 14061 28336 22720;22721 22720 982 2 9606 Homo sapiens 0.08732269342976906 KQGGLGPMNIPLVSDPK Unmodified 1749.9447 0.94474031 1476 A0A384NPQ2;Q06830;A0A0A0MSI0;B2R4P2 PRDX1 Peroxiredoxin-1 yes no 0 0 1 3 0 1 56.593 56.63 3 0.00027904 17033 20230619_1882_Aki_TMTPro18x_K_F3 82.248 63.426 259590 217430 256530 265850 206480 270330 252340 257830 251410 337260 309260 288730 281830 224810 309550 296460 270970 219460 240050 199450 260180 264590 219960 272660 251940 266370 258860 334890 313340 293070 289630 237770 312070 292560 259270 209450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1576299999.9999998 14852 1476 14061 28337 22722 22722 1 9606 Homo sapiens 0.09976573205608474 KQGIFGK Unmodified 776.45447 0.45447358 4548 Q9HC35;B5MBZ0;Q9HC35-2;B6EXY3;C1PHA1;J7MA22;C1PHA0 EML4;EML4-ALK variant 7;EML4-ALK;EML4-ALK variant 6 Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 1 4 0 1 44.235 44.279 3 0.035373 11394 20230619_1883_Aki_TMTPro18x_K_F4 58.604 39.507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14853 4548 14062 28338 22723 22723 1 9606 Homo sapiens 0.057304519054810044 KQGLLPLTFADPADYNK Unmodified 1889.9887 0.98871362 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;B4DEC3;Q71UF1;B4DW08 ACO2 Aconitate hydratase, mitochondrial yes no 0 0 1 2 0 1 61.25 61.26 4 6.8096E-05 19150 20230619_1881_Aki_TMTPro18x_K_F2 94.203 81.003 84115 79655 89674 105360 95447 109040 116750 110200 122890 107710 118970 106710 112990 94278 130770 102980 98100 99023 77898 73097 90839 104310 99247 109980 116640 112470 124610 108980 121960 107990 116290 98127 130710 103240 94184 94091 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 261290000 14854 1050 14063 28339 22724 22724 1 9606 Homo sapiens 0.07931880903629462 KQHLVEVR Unmodified 1007.5876 0.58761301 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 1 0 1 33.17 33.17 4 0.012524 7267 20230619_1880_Aki_TMTPro18x_K_F1 78.149 50.528 51218 32434 57188 57083 63809 55450 63587 63310 64242 56297 58807 49173 45923 38383 69242 39561 51109 31740 47339 29918 57678 55582 65598 56377 64158 63948 65171 57044 60015 49880 48362 40007 68827 39410 48942 30301 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25035000 14855 3881 14064 28340 22725 22725 1 9606 Homo sapiens 0.08412271291331308 KQIEELK Unmodified 886.51238 0.51238239 3423 V9HW74;P09936;D6RE83;B2RD14;D6R956;D6R974 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 0 1 7 0 1 43.1 43.179 3 0.001328 10555 20230619_1887_Aki_TMTPro18x_K_F7 111.04 10.888 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14856 3423 14065 28341 22726 22726 1 9606 Homo sapiens 0.0645866904022796 KQIWTLEQPPDEAGSAAVCLR Unmodified 2368.1845 0.18452967 1426 A0A384MEG1;Q16658 FSCN1 Fascin yes no 0 0 1 7.5 0.5 1 1 56.271 56.328 3 3.7437E-37 16274 20230619_1887_Aki_TMTPro18x_K_F7 234.11 220.52 103020 96335 110420 96188 97442 94073 115640 101670 84230 136370 123480 103280 115470 86859 130770 88320 90126 63587 95398 88174 111260 97241 102500 95573 114630 104290 89384 134820 124430 105730 118660 90260 130210 87525 86441 60755 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1205400000 14857 1426 14066 28342;28343 22727;22728 22727 2 9606 Homo sapiens 0.05516478295339766 KQLQDEMLR Unmodified 1159.6019 0.60194245 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80;A0A6Q8PGH0 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 1 6.5 0.5 1 1 42.552 42.637 3 0.00075964 10333 20230619_1887_Aki_TMTPro18x_K_F7 107.55 80.666 188390 161700 227300 241160 326990 313870 374630 315050 237690 249900 275550 154270 153160 102630 345070 81631 104430 72111 174550 148640 229320 237880 332100 311880 370530 320060 251360 252960 275210 159360 168790 106670 332780 82743 102020 68711 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281040000 14858 1428 14067 28344;28345 22729 22729 1 9606 Homo sapiens 0.028525556572731148 KQPAYLGGENLELR Unmodified 1586.8417 0.84165545 709 A0A024RC75;O14647-2;O14647;A0A1B0GTU9;A8K9Y5;A0A0D9SEU0;Q8N677;B7Z3I4;A0A8V8TRB2;A0A8V8TQC6;A0A0D9SEP7;O14647-3 CHD2 Chromodomain-helicase-DNA-binding protein 2 yes no 0 0 1 8 0 1 47.877 47.936 3 3.6603E-05 12650 20230619_1888_Aki_TMTPro18x_K_F8 107.93 88.249 39848 35948 37855 44736 47136 55611 44532 46447 60534 50800 62108 65794 57064 52635 61978 63919 63993 67719 36855 32973 38805 44581 48218 55188 45549 48200 60782 51588 63461 65672 58663 55298 63061 64261 61234 64266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55254000 14859 709 14068 28346 22730 22730 1 9606 Homo sapiens 0.07170828809330487 KQPPSFPGAAEER Unmodified 1412.7048 0.70482762 3821 Q6AWA4;Q12789;Q6AHZ7;Q12789-3 DKFZp686O0870;GTF3C1;DKFZp686A111 General transcription factor 3C polypeptide 1 yes no 0 0 1 6.5 0.5 1 1 41.408 41.49 3 0.0098077 9824 20230619_1887_Aki_TMTPro18x_K_F7 67.634 51.744 56074 34301 57964 60096 75035 69320 62568 76038 61323 55584 73410 79003 70676 66215 77244 53716 80151 79088 51783 31643 58971 58665 76127 69536 63832 76634 63008 57958 74697 78679 72565 68058 78455 55687 76652 74853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74018000 14860 3821 14069 28347;28348 22731 22731 1 9606 Homo sapiens 0.01498339649629088 KQPPVSPGTALVGSQK Unmodified 1592.8886 0.88860564 733 B4DWA0;A0A024RCT9;P17096;P17096-3 HMGA1 High mobility group protein HMG-I/HMG-Y yes no 0 0 1 3.5 0.5 2 2 45.548 45.608 3;4 1.7758E-06 11885 20230619_1883_Aki_TMTPro18x_K_F4 118.62 99.299 117850 85819 96731 116560 88642 98277 110330 115910 131360 122420 133830 135610 153830 126390 121370 152440 170190 142790 108740 78853 100020 114930 93376 101150 110670 117400 132700 123780 138050 136820 154840 132050 126840 152150 162180 135830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1811399999.9999998 14861 733 14070 28349;28350;28351;28352 22732;22733 22733 2 9606 Homo sapiens 0.11587688360441462 KQPQEAAVWR Unmodified 1211.6411 0.64110515 4245 Q8NBM8;B3KXF9;E7EVZ5 PCYOX1L Prenylcysteine oxidase-like yes no 0 0 1 1 0 1 39.771 39.771 3 0.0024607 9990 20230619_1880_Aki_TMTPro18x_K_F1 84.479 57.517 68171 58686 64380 69646 87758 91005 78924 84565 93764 69052 87480 84832 77762 64916 97076 64717 88650 77807 63027 53812 66092 69717 89049 90269 80552 86397 94336 71130 89649 84731 80572 67623 97722 65885 84826 73803 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37771000 14862 4245 14071 28353 22734 22734 1 9606 Homo sapiens 0.04375024003161343 KQPSNNLDR Unmodified 1070.5469 0.54687041 3184 Q2TSD3;L7RSM7;P17252;A0A169TED2;Q59FI5 PRKCA Protein kinase C;Protein kinase C alpha type yes no 0 0 1 7 0 1 30.455 30.558 3 0.0022492 5599 20230619_1887_Aki_TMTPro18x_K_F7 90.827 68.114 20159 8534.2 33989 22378 53843 48942 38059 50400 31848 25496 30129 29284 31957 22875 34783 9601.8 27779 22363 18690 7945.8 33593 21810 53790 47489 39138 50642 32738 27199 31088 29319 32647 23145 34787 10666 26609 21125 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23630000 14863 3184 14072 28354 22735 22735 1 9606 Homo sapiens 0.014418851810432898 KQPYDNPVR Unmodified 1115.5724 0.57235688 7 B4DKC1;A0A0C4DFM1;A0A024QYR3;Q92544;B4DH88;Q6ZTK5 TM9SF4 Transmembrane 9 superfamily member 4 yes no 0 0 1 8 0 1 35.341 35.329 3 0.00068401 7649 20230619_1888_Aki_TMTPro18x_K_F8 109.66 88.762 55201 36764 45764 45190 49684 47403 57023 50103 56195 63453 70789 76277 71467 58779 57341 75429 85755 78349 50911 33758 47324 44991 51443 47854 57040 51379 57901 63774 71996 76249 72258 62092 60221 75639 81724 74412 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57967000 14864 7 14073 28355 22736 22736 1 9606 Homo sapiens 0.01919359703470036 KQQAIELTQEEPYSDIIATPGPR Unmodified 2583.318 0.31804626 577 A0A024R9J0;O60216;B3KUT8;E5RG18 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 0 1 6 0 1 56.715 56.787 3 2.959E-12 16776 20230619_1886_Aki_TMTPro18x_K_F6 123.14 117.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14865 577 14074 28356 22737 22737 1 9606 Homo sapiens 0.08971995882120609 KQQCEELVTGTVR Unmodified 1546.7773 0.77734063 3348 O95219;Q9H398;O95219-2 SNX4 Sorting nexin-4 yes no 0 0 1 6.5 0.5 1 1 41.052 41.133 3 0.00011583 9725 20230619_1887_Aki_TMTPro18x_K_F7 109.44 101.66 110730 86545 110500 119230 105170 123060 115010 110330 130110 132460 128790 123500 139080 121570 115670 140910 171790 124450 102360 79509 112240 117730 109990 123820 115890 114220 131700 132440 132590 125740 140590 126460 121240 140320 163500 118550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85326000 14866 3348 14075 28357;28358 22738;22739 22739 2 9606 Homo sapiens 0.02582305660826023 KQQDVLGFLEANK Unmodified 1488.7936 0.79364262 2824 D3DTE6;V9HW48;O75368 SH3BGRL;HEL-S-115 SH3 domain-binding glutamic acid-rich-like protein yes no 0 0 1 1 0 1 59.165 59.165 4 0.0095832 18147 20230619_1880_Aki_TMTPro18x_K_F1 68.809 17.598 44275 35891 47008 49591 60900 65801 59566 58379 72323 57748 57692 70068 60835 67361 63011 65714 69167 72631 40959 32970 47754 49151 62117 65126 60509 60132 72351 58816 60119 70440 62215 69416 64391 66455 66143 68899 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131250000 14867 2824 14076 28359 22740 22740 1 9606 Homo sapiens 0.0687975488929169 KQQISLATQMVR Oxidation (M) 1417.7711 0.77113304 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 1 1 4 0 1 41.404 41.447 3 0.043487 10181 20230619_1883_Aki_TMTPro18x_K_F4 72.815 60.65 155330 140580 143840 162570 206910 213480 179480 177270 189150 73891 86205 57637 54539 52290 119140 45793 63576 52254 143640 128850 148120 163020 209090 211210 182770 180840 187680 79947 91854 59211 59770 53775 116540 46733 61288 49604 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96028000 14868 2633 14077 28360 22741 22741 1585 1 9606 Homo sapiens 0.07895832219992371 KQQISLATQMVR Unmodified 1401.7762 0.77621842 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 1 5 0 1 46.683 46.76 3 2.4169E-10 12371 20230619_1885_Aki_TMTPro18x_K_F5 190.1 162.48 354360 341230 346730 367550 379370 486350 359240 389250 447720 157880 138500 94021 90913 74970 270170 93158 115740 66009 327970 312500 353520 370630 391640 480430 366060 398090 437890 170600 154630 97954 102810 78955 262050 92396 111890 63165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 416870000 14869 2633 14077 28361 22742 22742 1 9606 Homo sapiens 0.0914013608262394 KQQMLENQMEVR Unmodified 1532.7439 0.74393201 2337;3778;3779 Q01082;B2ZZ89;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 1 7 0 1 43.975 44.057 3 4.4898E-05 10935 20230619_1887_Aki_TMTPro18x_K_F7 119.21 108.9 190260 155990 189210 180350 173600 237680 235820 216600 254370 240110 232060 219620 251270 195940 230790 233900 226770 185490 175920 143030 192110 180950 183560 235410 234680 223340 257180 240830 239930 223090 254730 204930 234820 231770 216720 176840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88830000 14870 2337;3778;3779 14078 28362 22743;22744 22744 2 9606 Homo sapiens -0.0011301938270662504 KQQNQELQEQLR Unmodified 1540.7958 0.79576789 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;K4DIE0;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 5.5 0.5 1 1 37.317 37.397 3 1.8999E-06 8447 20230619_1885_Aki_TMTPro18x_K_F5 144.57 126.91 305060 241690 248650 291350 384940 372380 336480 327710 364620 333360 402920 326320 351570 283890 374260 277630 345460 240500 281590 221720 259530 291150 387490 369530 342890 337990 371280 336470 408900 330310 361310 293930 378000 277440 330090 229210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 503120000 14871 349;3906 14079 28363;28364 22745;22746 22745 2 9606 Homo sapiens 0.047001836270965214 KQQPNPGNELCYK Unmodified 1574.7511 0.75112588 307 A0A024R4U3;Q14166;Q9BR23 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 1 8 0 1 42.574 42.577 3 0.00038779 10531 20230619_1888_Aki_TMTPro18x_K_F8 94.191 71.658 9043 16829 12615 14117 16925 15272 15822 12726 10104 14211 12139 8080.4 12450 8231.1 31161 9452.3 7683.2 7554.4 8455.7 15358 12589 14507 17155 15325 15837 13225 10727 14089 12391 8491.7 13542 8565.1 29941 9444.4 7577.3 7195.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9106700 14872 307 14080 28365 22747 22747 1 9606 Homo sapiens -0.01325963510589645 KQQQEILAAK Unmodified 1155.6612 0.66117189 476 A0A024R7W9;Q92905;E5RFS1;E5RG35;E5RK55 COPS5 COP9 signalosome complex subunit 5 yes no 0 0 1 8 0 1 41.964 41.961 3 0.0033631 10319 20230619_1888_Aki_TMTPro18x_K_F8 78.096 43.209 34888 21509 34019 29549 32773 41975 37421 38078 50914 44070 51153 56720 52950 46846 39890 49737 66213 53860 32204 19780 34593 29347 34336 41388 37883 39318 51083 44620 52565 56650 53405 48788 42292 50142 63012 51158 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14465000 14873 476 14081 28366 22748 22748 1 9606 Homo sapiens 0.08956774943112578 KQSFVLK Unmodified 848.51199 0.51198846 3634 V9HWE8;P52565;J3KTF8;J3QQX2;J3QW41;A0A0S2Z3D9;J3KRY1;P52565-2 HEL-S-47e;ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 0 0 1 5 0 1 45.772 45.849 3 0.053732 11987 20230619_1885_Aki_TMTPro18x_K_F5 52.716 11.214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14874 3634 14082 28367 22749 22749 1 9606 Homo sapiens 0.08167294111058254 KQTALVELLK Unmodified 1141.7071 0.70705945 2776 CON__P02769 yes yes 0 0 1 2.5 0.5 1 1 56.235 56.263 4 0.0001712 16909 20230619_1882_Aki_TMTPro18x_K_F3 113.47 58.089 + 15375 38285 41793 16056 113780 139910 67477 62236 102020 36777 34350 44503 22849 26115 35062 30283 45605 65899 14601 34804 41218 19693 111360 130280 71670 68143 99132 38972 38005 44164 24368 27793 36001 32353 43673 62140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21093000 14875 2776 14083 28368;28369 22750 22750 1 9606 Homo sapiens 0.14187420125381323 KQTDFEHR Unmodified 1059.5098 0.50975662 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;Q8WTZ9;O14943;Q49A78;B1APP8 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 1 5 0.816 1 1 1 30.753 30.811 4 0.0002286 5954 20230619_1885_Aki_TMTPro18x_K_F5 146.69 120.18 101730 57265 118070 136950 176950 161580 154120 170830 158760 121270 175380 200680 155230 144440 164020 71408 201600 167970 94007 53124 119550 131920 178180 161640 156900 172540 161960 127610 178480 197970 159590 147020 168160 78675 192290 158640 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 99565000 14876 1831 14084 28370;28371;28372 22751;22752;22753 22752 3 9606 Homo sapiens -0.01761786364704676 KQTGFVPPGRPK Unmodified 1310.7459 0.74590457 18 D6RB59;A0A024QYZ6;O60645;Q69YP2;Q6ZNJ2;H0Y995 EXOC3;DKFZp762K123;FLJ00339 Exocyst complex component 3 yes no 0 0 2 6 0 1 38.549 38.632 4 0.0039174 8969 20230619_1886_Aki_TMTPro18x_K_F6 75.088 46.323 32188 28280 30716 37262 45488 46173 41374 38033 43930 33277 46389 41455 37459 31847 41594 35671 43719 40370 29766 25957 31584 36987 45937 45831 42020 39306 44654 34155 47065 41414 38709 33371 42306 36070 41786 38306 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13950000 14877 18 14085 28373 22754 22754 1 9606 Homo sapiens 0.10296145479742336 KQTIDNSQGAYQEAFDISK Unmodified 2142.0229 0.022926872 3511 P27348;B4DMT8;Q53S41;B4DY04 YWHAQ 14-3-3 protein theta yes no 0 0 1 7 0 1 52.871 52.941 3 2.2054E-05 14928 20230619_1887_Aki_TMTPro18x_K_F7 94.057 82.435 80319 88258 119440 103570 113560 108770 122700 88813 85685 100010 110760 87991 96530 69284 236090 70057 69143 78441 74727 80857 117880 103440 118300 109210 122050 92533 90440 100080 112010 89244 105310 72217 227490 71402 67834 74381 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 145230000 14878 3511 14086 28374 22755;22756 22756 2 9606 Homo sapiens -0.002403674660854449 KQVEELFER Unmodified 1176.6139 0.61388734 2144;1327 A0A1W6S962;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52 GTF2I General transcription factor II-I no no 0 0 1 4.5 0.5 1 1 49.219 49.276 3 0.0053833 13463 20230619_1885_Aki_TMTPro18x_K_F5 73.499 38.804 195010 161080 180910 211660 187280 236750 216800 202050 225540 217650 245060 198270 200930 156620 207900 180390 162410 131380 180220 147880 185280 209830 195060 236600 217150 209290 229950 218550 248290 200830 206600 164180 208620 178310 155620 125420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200390000 14879 1327;2144 14087 28375;28376 22757 22757 1 9606 Homo sapiens 0.032644956721242124 KQVVNIPSFIVR Unmodified 1398.8347 0.83471958 299 A0A024R4M0;P46781;A5D904 RPS9 40S ribosomal protein S9 yes no 0 0 1 6.5 0.5 1 1 55.444 55.513 3 2.5863E-05 15959 20230619_1887_Aki_TMTPro18x_K_F7 121.66 99.507 318130 325170 328970 327060 309240 329680 370000 324600 280080 216900 171210 109010 157820 104630 253440 141680 114950 83292 294710 297560 332980 330420 323960 333270 366710 329250 286010 221740 180110 115620 165730 110190 247770 138910 111110 79846 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326940000 14880 299 14088 28377;28378 22758 22758 1 9606 Homo sapiens 0.15125560719388886 KREDAEHNLVLFR Unmodified 1625.8638 0.86378788 2433 B3KWQ6;P41219;P41219-2;F8W835 PRPH Peripherin yes no 0 0 2 6.2 2.64 1 2 2 40.72 40.744 4;5 1.4355E-10 9728 20230619_1888_Aki_TMTPro18x_K_F8 174.73 152.89 327510 279780 301590 328920 268860 293670 309280 291650 375780 401590 424440 442380 437620 407120 481350 466990 451100 521830 302720 256530 308170 327730 283070 299710 311650 301210 381110 401220 434030 446010 448470 424200 486980 471450 432390 494800 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 5701700000 14881 2433 14089 28379;28380;28381;28382;28383 22759;22760;22761;22762 22762 4 9606 Homo sapiens 0.07589053277706626 KREDSAPPSSVAR Unmodified 1398.7215 0.72154031 2806 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;Q9BZE4-2;B4DHR2;Q9BZE4-3 GTPBP4 Nucleolar GTP-binding protein 1 yes no 0 0 2 6 0 1 29.053 29.084 4 0.028953 5445 20230619_1886_Aki_TMTPro18x_K_F6 61.409 51.033 21456 14656 28572 30557 38222 37217 29762 31477 32464 27105 44002 42147 27503 29648 36568 18019 34687 32103 19874 13549 28581 29603 38653 36980 30605 32443 33332 28087 43879 41658 29053 30359 36817 19152 33189 30351 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6548400 14882 2806 14090 28384 22763;22764 22763 2 9606 Homo sapiens 0.038128405355337236 KREDSIPLR Unmodified 1112.6302 0.63020611 2624 Q495U0;B4DYM7;Q6UVJ0 SASS6 Spindle assembly abnormal protein 6 homolog yes no 0 0 2 8 0 1 34.268 34.26 4 0.00040757 7202 20230619_1888_Aki_TMTPro18x_K_F8 122.26 94.515 54700 40175 45765 53551 54791 49229 80067 81576 54394 64656 66089 68949 69873 54515 49443 85222 74014 62619 50479 36905 47430 52951 56718 50859 78458 80627 57368 66284 67438 69368 70210 58312 52188 83774 70500 59757 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19405000 14883 2624 14091 28385 22765 22765 1 9606 Homo sapiens 0.07839621628886562 KREDYESQSNPVFR Unmodified 1753.8384 0.83836099 84 Q96S66;A0A6Q8PG75;Q96S66-2;A0A6Q8PEZ7;A0A024R0G0;A0A6Q8PHQ1;A0A6Q8PG30;A0A024R095;A0A6Q8PGA4;Q96S66-4;Q96S66-3;A0A8I5KRC0;A0A6Q8PG14;Q5T1P5;A0A6Q8PG68;A0A6Q8PFT6;A0A6Q8PF11;A0A8I5KXB0;A0A6Q8PFH1;A0A6Q8PF97 CLCC1 Chloride channel CLIC-like protein 1 yes no 0 0 2 7 0 1 37.933 37.996 4 1.5952E-06 8449 20230619_1887_Aki_TMTPro18x_K_F7 127.18 104.7 43502 36121 44852 45559 50440 51301 48685 55384 65265 50971 60969 73439 68746 63568 63215 84260 77635 76891 40239 33146 45531 45321 51892 51541 49721 56166 65335 52453 63181 73228 69711 66932 65292 83866 74136 73112 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55157000 14884 84 14092 28386 22766;22767 22766 2 9606 Homo sapiens -0.008404660353562576 KREEAAAVPAAAPDDLALLK Unmodified 2048.1266 0.12660408 567 A0A024R9D2;Q86UE4;E5RJU9 MTDH Protein LYRIC yes no 0 0 2 7 0 1 51.994 52.068 4 0.014152 14502 20230619_1887_Aki_TMTPro18x_K_F7 60.032 40.193 61270 42541 50885 54600 50521 56935 61214 60335 64569 67819 62941 63164 68801 58684 67376 74392 64613 71338 56522 39072 52576 54184 52822 57468 61206 61601 65562 67987 64929 64192 69961 61515 68427 74315 61895 67765 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1124500000 14885 567 14093 28387 22768 22768 1 9606 Homo sapiens 0.1444658443224398 KREESYLSNSQTPER Unmodified 1822.881 0.88095408 4080 Q5VY60;Q7Z4H7-3;Q7Z4H7 HAUS6 HAUS augmin-like complex subunit 6 yes no 0 0 2 6 0 1 34.234 34.281 4 1.2393E-05 7357 20230619_1886_Aki_TMTPro18x_K_F6 115.73 107.34 37052 28524 33187 42581 44409 44691 42472 46372 48140 38939 42541 39401 42289 36816 41733 39826 54340 40538 34219 26232 34255 41848 45167 45062 43112 47051 48477 39777 43885 39911 43166 38220 43124 40026 51775 38547 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26313000 14886 4080 14094 28388 22769 22769 1 9606 Homo sapiens 0.0024288430222441093 KREGELTVAQGR Unmodified 1342.7317 0.73171107 1473 Q03252;A0A384NPH0 LMNB2 Lamin-B2 yes no 0 0 2 7.5 0.5 1 1 32.363 32.412 4 0.00019853 6477 20230619_1888_Aki_TMTPro18x_K_F8 109.44 81.793 79208 94003 75778 62024 117440 103310 96070 107880 113450 50936 63758 48854 62242 46060 68519 61731 72317 50932 73421 85741 77777 65985 117930 101610 98619 108270 112430 54562 67612 49739 63857 48451 69726 61206 69008 48568 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40641000 14887 1473 14095 28389;28390 22770;22771 22771 2 9606 Homo sapiens 0.07405448260783487 KREPEDEGEDDD Unmodified 1432.559 0.55901082 1493 A0A384P5U2;P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes no 0 0 2 1.5 0.5 1 1 31.019 31.052 3 0.00029074 6380 20230619_1880_Aki_TMTPro18x_K_F1 89.44 83.277 35019 13072 44077 47318 59208 61644 48388 60578 53193 31724 63098 76137 45356 50364 55567 18373 66257 62728 32341 12280 44262 45084 59959 61144 49612 61172 54186 34960 63601 74312 47420 51086 56700 21593 63266 59123 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46719000 14888 1493 14096 28391;28392 22772;22773 22772 2 9606 Homo sapiens -0.1399663244774274 KRGEGEDEVEEESTALQK Unmodified 2032.9549 0.95490689 4397 Q96T23-2;Q96T23;Q96T23-3;H0YCN2;H0YEX0 RSF1 Remodeling and spacing factor 1 yes no 0 0 2 2 0 1 41.527 41.603 4 0.0038645 10549 20230619_1881_Aki_TMTPro18x_K_F2 70.335 58.032 49595 44642 48887 56358 60336 57479 57572 58800 67375 66058 80578 78972 85922 68438 69016 75368 80865 87972 45882 40953 49926 55963 61629 58095 58526 60181 68605 66763 82254 79243 86684 71344 71167 76315 77306 83397 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111610000 14889 4397 14097 28393 22774 22774 1 9606 Homo sapiens -0.02025237116754397 KRPAPQQIQQVQQQAVQNR Unmodified 2244.2199 0.21994439 119 Q96GM5;A0A024R102;A0A024R137;Q96GM5-2;F8VUB0;B4DF50;F8VZ70;F8VW95 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 0 0 2 6.5 0.5 1 1 37.245 37.311 4 1.4305E-24 8424 20230619_1886_Aki_TMTPro18x_K_F6 206.43 193.51 24932 21494 26138 30485 27323 29872 30814 27633 27316 28463 32054 27582 33815 24134 31993 28695 27012 25914 23071 19746 26498 30025 28358 30196 30760 28426 28220 28690 32718 27942 34324 25269 32271 28622 25886 24647 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88138000 14890 119 14098 28394;28395 22775 22775 1 9606 Homo sapiens 0.14760321658059183 KRPEDTAASALQEGQTQR Unmodified 1984.9926 0.9926298 542 A0A024R8V6;Q9P275 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 0 0 2 6 0 1 37.149 37.217 4 5.3652E-30 8399 20230619_1886_Aki_TMTPro18x_K_F6 222.7 176.91 15052 15198 15963 17570 20632 21411 18604 17183 21979 22511 20277 22914 22462 19881 18951 23730 23948 21174 13945 13925 16219 17597 20997 21271 18976 17992 22152 22482 20996 23127 22700 20803 19634 23630 22845 20148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52882000 14891 542 14099 28396 22776 22776 1 9606 Homo sapiens 0.03953318659364413 KRPYEENR Unmodified 1090.552 0.55195579 95 Q9BUJ2;A0A0A0MRA5;Q9BUJ2-2;Q9BUJ2-4;A8K6U7;A8K3W4;B7Z4B8;A0A024R0J9;Q9BUJ2-3;A8K5K0;M0QYZ0;M0R3F1;M0QZV6;M0R0K8;M0R203;M0QYI8 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 2 6 0 1 27.226 27.259 4 0.018142 4821 20230619_1886_Aki_TMTPro18x_K_F6 74.301 57.361 27437 9869.1 33504 33774 57260 46461 42532 51048 37433 28914 47963 43445 37288 33737 49848 9640.2 36981 33633 25328 9259.3 33869 32268 57031 46106 43610 51207 38801 30834 48247 43092 38974 33865 49530 11560 35484 31703 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13547000 14892 95 14100 28397 22777 22777 1 9606 Homo sapiens 0.010301890436494432 KRQESQQNSDQNSNLNPHVIR Unmodified 2491.2276 0.22760854 823 A0A087WVF4;O14646-2;O14646;B3KT33 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes no 0 0 2 8 0 1 31.693 31.698 5 8.85E-17 6223 20230619_1888_Aki_TMTPro18x_K_F8 166.91 135.09 3347.6 3209.7 3337.5 2969.5 2485.1 3308.2 2888 2718.2 3486.9 4439.6 3371.8 2620.7 3579.5 2122.9 1952.6 3907.8 3547.4 2948.6 3098.7 2935.8 3376.3 3026.3 2665 3307.7 2908.8 2863.1 3520.2 4338.1 3466 2727.2 3564.7 2305.3 2112.8 3838.1 3374.6 2812.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7365500 14893 823 14101 28398 22778 22778 1 9606 Homo sapiens 0.04164384397063259 KRVEGPGSLGLEESGSR Unmodified 1756.9068 0.9067749 3825 Q561W4;Q12972;A0A0A0MT09;Q38J66;Q12972-2;Q6ICT4;Q12972-3 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay yes no 0 0 2 7 0 1 39.012 39.076 4 1.9804E-06 8845 20230619_1887_Aki_TMTPro18x_K_F7 114.99 103.72 16717 14143 15703 17498 24882 20070 25223 23478 19577 19823 26663 25592 20246 16822 24990 15407 19444 15833 15454 12975 16181 17433 25050 20196 25231 23655 20536 20387 26748 25414 21075 17562 24968 15567 18633 15047 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29351000 14894 3825 14102 28399 22779 22779 1 9606 Homo sapiens 0.058597785445272166 KSDGIYIINLK Unmodified 1262.7234 0.72343779 205 C9J9K3;A0A8V8TMX1;A0A024R2L6;A0A0C4DG17;A0A8V8TLA4;P08865;A0A8I5KQE6;Q96RS2;A0A024R7P5;F8WD59 RPSA;LOC388524 40S ribosomal protein SA yes no 0 0 1 3 0 1 55.641 55.682 3 0.03419 16646 20230619_1882_Aki_TMTPro18x_K_F3 54.259 21.736 234870 226380 229030 270510 290930 377770 287170 271160 330410 183600 107170 142700 166950 147280 209320 143690 128780 107390 217370 207520 234420 270820 297700 371240 290870 282070 325080 189410 123510 146710 170570 151540 207280 142700 123850 102460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 356840000 14895 205 14103 28400 22780 22780 1 9606 Homo sapiens 0.1025850129144601 KSDIDEIVLVGGSTR Unmodified 1587.8468 0.84680041 3429 V9HWB4;P11021;A0A7P0TB36 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 1 5.6 1.02 1 1 2 1 53.056 53.116 2;3 0.0002643 15437 20230619_1883_Aki_TMTPro18x_K_F4 92.307 72.729 216560 164660 201790 204450 199420 246550 238540 250540 283430 261810 268010 254920 293960 241520 299370 319400 357070 319130 200040 151120 206240 203800 208670 246120 239660 255880 285560 263830 276820 258840 299490 253770 307590 319630 340820 303260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6178399999.999999 14896 3429 14104 28401;28402;28403;28404;28405 22781;22782;22783 22781 3 9606 Homo sapiens 0.07639087881238993 KSDIYVCMISYAHNVAAQGK Unmodified 2254.0875 0.087458159 1080 A0A0S2Z3X8;P31150;B4DHX4;B4E070 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 1 5.5 0.5 1 1 59.771 59.827 4 1.1334E-07 18087 20230619_1886_Aki_TMTPro18x_K_F6 104.86 21.795 86170 81435 90645 88643 80046 103280 95586 88379 87746 62285 61045 55572 59238 48804 70798 60816 56540 57787 79790 74588 91557 89153 84466 102970 95239 90653 88695 64189 63823 56535 61051 51213 70948 60789 54244 54914 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134570000 14897 1080 14105 28406;28407 22784 22784 1 9606 Homo sapiens 0.01057792814754066 KSDMEWTSSSK Unmodified 1284.5656 0.56561652 1003 Q59GQ7;A0A0C4DGA6;Q14527-2;Q14527;A8K5B6;H7C5K0 HLTF Helicase-like transcription factor yes no 0 0 1 7 0 1 43.759 43.84 3 0.0018016 10834 20230619_1887_Aki_TMTPro18x_K_F7 85.457 66.625 76087 65240 79470 72491 79843 89142 74165 73478 86296 101590 110420 106800 125070 107050 98051 117560 137610 120270 70403 59786 80399 72862 82768 88546 75542 76894 88278 101330 112740 108210 125930 110970 102460 118070 131170 114270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28849000 14898 1003 14106 28408 22785 22785 1 9606 Homo sapiens -0.06528366030079269 KSDPVVSYR Unmodified 1049.5506 0.55055881 3447 P13639;Q8TA90;B4DPU3 EEF2 Elongation factor 2 yes no 0 0 1 7.5 0.5 1 1 37.607 37.632 3 0.00069886 8502 20230619_1888_Aki_TMTPro18x_K_F8 97.813 82.151 1401400 954360 1184000 1188800 1156400 819800 1230100 1256300 1037100 1756600 1811100 1709900 1834200 1531700 1346200 2066500 1934900 1646200 1292800 876350 1219700 1177300 1201500 868540 1231400 1266700 1101300 1745000 1821500 1732700 1848000 1613600 1413900 2042500 1843600 1569100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2410800000 14899 3447 14107 28409;28410 22786;22787 22787 2 9606 Homo sapiens 0.027765549549030766 KSDSNPLTEILK Unmodified 1343.7296 0.72964538 4084 Q5W009;Q96I25 RBM17 Splicing factor 45 yes no 0 0 1 8 0 1 55.579 55.641 3 0.00061786 16035 20230619_1888_Aki_TMTPro18x_K_F8 93.478 44.358 117170 111860 111170 128010 113140 132660 132120 138870 143130 149820 132250 136180 143500 123680 129560 150990 150440 148800 108410 102500 113580 128030 117940 133950 132470 141700 144850 150380 136730 138420 145480 129450 133260 151110 143730 141360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55725000 14900 4084 14108 28411 22788 22788 1 9606 Homo sapiens 0.0715297473229839 KSDVEAIFSK Unmodified 1122.5921 0.59208927 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;P07910-4;D3DPI2;G3V5X6;G3V3K6;G3V251;G3V575;G3V555;B4DSU6;Q6PKD2;P0DMR1;A0A0G2JNQ3;A0A0G2JPF8;B7ZW38;B2RXH8;O60812;B4DMJ1;G3V4M8;G3V2H6;Q569J8 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL3;HNRNPCL2;HNRNPCL1;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 0 0 1 4.5 3.04 1 1 1 1 53.339 53.382 3 0.00036621 15066 20230619_1887_Aki_TMTPro18x_K_F7 102.66 28.94 6954100 5511800 6753600 6567300 6733200 7682700 8033800 7826300 8160500 9611800 8821900 9884900 10195000 9411500 8604700 11448000 10827000 10515000 6427500 5055800 6876900 6562800 7030900 7687600 8029800 8031900 8342500 9624100 9087600 10005000 10293000 9826500 8916000 11411000 10336000 9998300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 16542000000 14901 2226 14109 28412;28413;28414;28415 22789;22790;22791 22790 3 9606 Homo sapiens 0.035696909235639396 KSEEEIDFLR Unmodified 1264.6299 0.62993134 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;B0QY90 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 1 3 0.816 1 1 1 48.71 48.771 3 0.00063818 13561 20230619_1882_Aki_TMTPro18x_K_F3 99.343 73.3 756370 616440 693250 725970 744060 835780 806660 805760 889970 879450 859960 823650 967200 766810 833630 980630 857750 879630 698900 565320 710480 725730 770800 836180 812350 827080 901090 883210 888160 837120 976970 804350 852200 975970 820610 836470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1106000000 14902 2176 14110 28416;28417;28418 22792;22793;22794 22793 3 9606 Homo sapiens 0.008201571183690248 KSEGLITSENEK Unmodified 1333.6725 0.67252444 3796 Q05209;Q05209-2;Q05209-3;H3BM04 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes no 0 0 1 4 0 1 41.534 41.577 3 0.0051743 10225 20230619_1883_Aki_TMTPro18x_K_F4 68.277 40.416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14903 3796 14111 28419 22795 22795 1 9606 Homo sapiens 0.01903507455926956 KSEIEYYAMLAK Unmodified 1444.7272 0.72720254 568 A0A024R9D3;P62888;E5RI99 RPL30 60S ribosomal protein L30 yes no 0 0 1 1.5 0.5 1 1 58.335 58.342 4 0.000238 17822 20230619_1880_Aki_TMTPro18x_K_F1 101.53 87.275 247080 204280 254770 226140 201720 238800 260860 227850 230750 297560 243340 217670 294040 209000 245240 273620 232420 246330 228540 187230 257220 226910 215290 240320 258730 235440 237710 294450 251140 224310 295830 219540 249680 272320 222590 234200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 270180000 14904 568 14112 28420;28421 22796 22796 1 9606 Homo sapiens 0.02262803003031877 KSESEVEEAAAIIAQRPDNPR Unmodified 2309.1612 0.16115169 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;B3KSQ7;B7Z2Z0;D6R9Q9 DBN1 Drebrin yes no 0 0 2 5 1.41 1 1 1 1 1 51.29 51.356 4 6.3372E-37 14448 20230619_1886_Aki_TMTPro18x_K_F6 233.1 200.55 1244700 1036200 1113200 1352100 1166700 1161700 1307600 1183700 1230600 1670300 1698300 1524100 1797800 1458600 1372100 1597500 1653500 1817900 1150100 951160 1143800 1336700 1210200 1190200 1308100 1221500 1278600 1656800 1723200 1551700 1810800 1515200 1419600 1614800 1580500 1723700 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2587800000 14905 1396 14113 28422;28423;28424;28425;28426 22797;22798;22799 22799 3 9606 Homo sapiens 0.05893755782426524 KSPQELLCGASLISDR Unmodified 1772.9091 0.90908309 2771 CON__P00735;B4DDT3;E9PIT3;P00734;Q69EZ8 F2 Prothrombin;Activation peptide fragment 1;Activation peptide fragment 2;Thrombin light chain;Thrombin heavy chain yes no 0 0 1 1.5 0.5 1 1 55.711 55.722 3 1.624E-08 16833 20230619_1881_Aki_TMTPro18x_K_F2 139.49 117.72 + 57638 60806 74630 83715 92639 110360 99480 89897 114690 247710 361490 370400 219940 206320 459700 158660 166650 240830 53523 55806 74755 82958 95006 109100 100520 97508 125930 245260 353530 364400 239970 215630 445440 165840 162800 227600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 998070000 14906 2771 14114 28427;28428 22800;22801 22801 2 9606 Homo sapiens 0.05354490957984126 KSQIFSTASDNQPTVTIK Unmodified 1964.0215 0.021470309 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 1 2 0 1 51.361 51.406 4 0.00024635 15035 20230619_1881_Aki_TMTPro18x_K_F2 80.975 56.675 63263 58786 67490 70262 74647 81148 83582 78575 79727 87814 85382 67645 77522 58606 94575 64788 57009 41763 58579 53894 68341 70168 77155 81183 83635 80688 81712 87615 86922 69291 80069 61093 93629 63842 54803 39967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146740000 14907 3429 14115 28429 22802 22802 1 9606 Homo sapiens 0.07802043235801648 KSQVFSTAADGQTQVEIK Unmodified 1935.9902 0.99017018 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;B7Z4T3;B7Z1V7;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 1 7.67 0.471 1 2 49.361 49.438 3;4 1.693E-13 13283 20230619_1888_Aki_TMTPro18x_K_F8 148.56 140.56 374650 390470 445490 362060 448130 401300 518230 444780 328860 507560 520620 286470 315460 225340 634630 167590 184650 104250 347570 357060 446140 369090 465610 404390 512760 453030 353910 502300 515270 298880 342610 231720 612290 167460 180470 99986 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 899570000 14908 1488 14116 28430;28431;28432 22803;22804 22804 2 9606 Homo sapiens 0.059614702016915544 KSSGEIVYCGQVFEK Unmodified 1729.8345 0.83452116 3788 Q02543;M0R3D6;M0R1A7;B4DM94;M0R117;B4DM74;B4DUV3;B2R4C0;Q53HD3;M0R0P7 RPL18A 60S ribosomal protein L18a yes no 0 0 1 8 0 1 50.365 50.441 3 0.0011302 13704 20230619_1888_Aki_TMTPro18x_K_F8 74.519 60.856 484270 403450 494430 477430 455440 457260 565800 489590 392930 572500 357180 246430 429340 273630 412050 319830 288020 143880 447920 369970 500710 476050 478160 464900 558750 500210 409930 563790 370820 265750 434250 284270 411880 311260 275770 139050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 346720000 14909 3788 14117 28433 22805 22805 1 9606 Homo sapiens -0.001202718534386804 KSSTPLSEAK Unmodified 1046.5608 0.56078914 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 1 8 0 1 39.112 39.099 3 0.00072683 9081 20230619_1888_Aki_TMTPro18x_K_F8 96.745 45.299 67181 33408 96240 87440 121580 107850 97938 100730 74992 47498 82071 47501 38965 32268 117970 14276 40424 18265 62191 31071 95637 84046 123280 107290 99478 101970 77837 50861 81912 47806 44784 32845 113700 15215 39274 17387 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54766000 14910 630 14118 28434 22806 22806 1 9606 Homo sapiens 0.039371178894725745 KSTVLQQQYNR Unmodified 1363.7208 0.72081203 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 1 4 0 1 38.431 38.474 3 0.00017664 8917 20230619_1883_Aki_TMTPro18x_K_F4 115.33 96.887 105600 97564 102870 97314 165240 172720 150510 137180 152870 35134 42185 29419 33955 26781 79598 27626 32118 26125 97705 89302 105640 99328 166200 168150 152520 139850 150820 41042 48166 30163 37078 27771 77226 27838 31148 24852 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55250000 14911 1292 14119 28435 22807 22807 1 9606 Homo sapiens 0.05350045886530097 KSVFDEELTNTSK Unmodified 1496.7359 0.73585297 2338 B7Z6D5;B3GQE6;Q96GQ7;Q53G15 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 0 1 6 0 1 49.912 49.989 3 0.0051424 13890 20230619_1886_Aki_TMTPro18x_K_F6 63.128 5.6939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14912 2338 14120 28436 22808 22808 1 9606 Homo sapiens 0.007354481731681517 KTCAYTNHTVLPEALER Unmodified 2001.9942 0.9942097 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 1 8 0 1 43.782 43.792 4 8.0643E-10 11019 20230619_1888_Aki_TMTPro18x_K_F8 142.58 124.52 41825 33408 47043 50572 52655 47556 55687 52917 47759 63793 62875 52606 47500 39254 61296 42087 43665 35896 38708 30724 47451 49609 54198 48454 55744 53985 49769 63492 63089 53438 49578 41087 61007 41978 41895 34189 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38575000 14913 3432 14121 28437 22809 22809 1 9606 Homo sapiens 0.03329236423769544 KTCTTVAFTQVNSEDK Unmodified 1827.8673 0.86727785 3722 P62424;Q9BY74;Q5T8U2 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 0 0 1 8 0 1 45.705 45.743 3 1.1681E-05 11769 20230619_1888_Aki_TMTPro18x_K_F8 102.88 87.955 142130 115720 144960 128940 146620 130500 173530 152300 115570 153870 133870 75749 109600 71572 146440 67800 60979 30462 131440 106070 146930 129270 152440 132460 171630 154120 121940 152900 135160 80346 114090 73885 143100 66405 58959 29441 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126370000 14914 3722 14122 28438 22810 22810 1 9606 Homo sapiens -0.013541095212303844 KTDDVEAMSSQPALALDER Unmodified 2074.9841 0.98409852 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 1 3.8 1.17 1 1 1 2 50.733 50.791 3 1.4546E-31 14804 20230619_1881_Aki_TMTPro18x_K_F2 237.16 224.1 608760 462720 523110 593170 421860 542990 529100 523160 570500 692170 690080 767040 738150 657810 723660 799720 767670 850720 562000 424820 537460 587580 449920 552270 528860 540600 584170 692500 705150 771330 751330 689560 739000 803990 734650 807180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1552599999.9999998 14915 630 14123 28439;28440;28441;28442;28443 22811;22812;22813;22814 22811 4 9606 Homo sapiens -0.010394160920895956 KTDDVEAMSSQPALALDER Oxidation (M) 2090.979 0.97901315 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 1 1 3 0 1 45.51 45.586 3 0.001021 12108 20230619_1882_Aki_TMTPro18x_K_F3 87.963 78.68 182630 143340 145150 196350 170310 177640 167320 163120 184070 195630 238040 257080 211430 204660 224550 238250 241050 274540 168540 131680 151220 193560 174860 180730 169450 168650 188720 197800 240690 256390 217410 214510 229110 240870 230710 260250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254280000 14916 630 14123 28444 22815 22815 368 1 9606 Homo sapiens -0.022837199546756892 KTDFFIGGEEGMAEK Unmodified 1657.7658 0.76577289 4703 Q9Y266;A0A0A0MSU9 NUDC Nuclear migration protein nudC yes no 0 0 1 5.5 0.5 1 1 54.543 54.615 3 8.7117E-06 15841 20230619_1886_Aki_TMTPro18x_K_F6 115.34 103.36 91732 70969 90062 93700 72353 106250 95003 96370 103770 126030 114940 124980 131430 111220 108770 132010 120360 127590 84780 65172 91417 92910 77375 106190 94792 99916 105800 125710 118190 126400 132540 116280 111770 132010 115100 121210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183880000 14917 4703 14124 28445;28446 22816 22816 1 9606 Homo sapiens -0.03679936153116614 KTDPSSLGATSASFNFGK Unmodified 1813.8846 0.88464248 312 A0A024R4X7;Q9UKX7-2;Q9UKX7;B4E2D3 hCG_1989366;NUP50 Nuclear pore complex protein Nup50 yes no 0 0 1 2.5 0.5 1 1 53.394 53.434 3 2.6846E-09 15673 20230619_1882_Aki_TMTPro18x_K_F3 122.64 104.1 194120 168420 181490 191800 190640 214000 211810 210190 233650 203260 192920 165960 200660 162680 188590 214820 188180 189840 179470 154370 185630 192120 197930 214650 213000 214780 235140 204730 200030 170220 203930 170720 192110 213570 180070 180570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177450000 14918 312 14125 28447;28448 22817 22817 1 9606 Homo sapiens 0.01025554076068147 KTDVEERPR Unmodified 1128.5887 0.58873523 1003 Q59GQ7;A0A0C4DGA6;Q14527-2;Q14527;A8K5B6 HLTF Helicase-like transcription factor yes no 0 0 2 4.5 0.5 1 1 29.367 29.439 4 0.00035877 5327 20230619_1883_Aki_TMTPro18x_K_F4 125.75 105.46 50631 23816 72502 73888 94483 91547 68716 82822 67068 55960 105060 127820 77252 84552 101430 33244 116930 100780 46860 22243 72142 70627 95535 90952 70833 84499 69828 60148 104990 124860 80993 85885 103180 38256 111610 95064 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73610000 14919 1003 14126 28449;28450 22818 22818 1 9606 Homo sapiens 0.02958440869565493 KTEAPAAPAAQETK Unmodified 1411.7307 0.73070802 3759 P80723;P80723-2 BASP1 Brain acid soluble protein 1 yes no 0 0 1 5.2 0.748 1 2 2 37.454 37.53 3;4 9.7911E-07 8520 20230619_1886_Aki_TMTPro18x_K_F6 128.45 107.2 179280 90033 228910 186590 214950 275640 129830 168270 150550 159330 283050 332700 242760 246380 294470 91378 310260 307990 165760 83362 227870 181480 222340 269230 136960 179090 157390 166780 282840 326460 251680 248820 298230 107150 296690 290240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1279500000 14920 3759 14127 28451;28452;28453;28454;28455 22819;22820 22820 2 9606 Homo sapiens 0.041311891011901025 KTESAVSQMQSVIELGR Unmodified 1861.9568 0.95676156 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2;Q7L4K8 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 1 1.5 0.5 1 1 55.733 55.743 3 1.8763E-18 16877 20230619_1881_Aki_TMTPro18x_K_F2 181.34 154.31 142960 108220 113380 125240 109370 147110 126190 136460 147330 181060 172800 211510 229500 189470 155650 241920 241370 271770 131900 99257 117670 125380 114680 146810 126980 141300 150130 181470 178760 212530 228960 199010 164790 243640 230330 257700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1429200000 14921 1736 14128 28456;28457 22821;22822 22821 2 9606 Homo sapiens 0.06026145158170948 KTETMNVVMETNK Unmodified 1523.7324 0.73236428 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 8 0 1 47.164 47.212 3 6.4733E-05 12359 20230619_1888_Aki_TMTPro18x_K_F8 110.77 87.675 122820 101480 116950 119510 118460 146220 139740 128560 148610 122330 118460 114010 130770 103770 119340 141640 139430 118000 113530 93056 119360 119570 123620 145390 139900 132410 149650 123780 123490 115840 132520 109390 122770 140340 133070 112410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60022000 14922 3440 14129 28458 22823 22823 1 9606 Homo sapiens -0.008552611966706536 KTFEINPR Unmodified 1003.5451 0.5450795 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;B4DU71;B4DHT9;Q58FF3;Q58FF2 HSP90B1;HEL-S-125m;TRA1;HSP90B2P;GRP94c Endoplasmin;Putative endoplasmin-like protein yes no 0 0 1 1.5 0.5 1 1 41.579 41.617 3 0.0087542 10561 20230619_1881_Aki_TMTPro18x_K_F2 77.677 48.591 715670 604750 714090 773970 931410 825900 969620 877200 791310 811480 1041500 696540 596670 407770 1071000 410850 485490 262100 661880 554990 729050 768440 948970 832870 969840 891020 825660 819560 1035900 703000 643960 430590 1044700 406890 468630 251340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 569940000 14923 3452 14130 28459;28460 22824 22824 1 9606 Homo sapiens 0.04344876163088429 KTFSYAGFEMQPK Unmodified 1532.7334 0.73335055 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 1 3 0 1 54.006 54.059 3 0.025367 15955 20230619_1882_Aki_TMTPro18x_K_F3 54.261 37.955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14924 4005 14131 28461 22825 22825 1 9606 Homo sapiens -0.011706787654702566 KTGCNVLLIQK Unmodified 1272.7224 0.72239194 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 1 4.5 0.5 1 1 48.425 48.484 3 0.0020886 13076 20230619_1885_Aki_TMTPro18x_K_F5 83.047 3.3064 250440 195100 195780 237810 267330 323690 248050 260110 350330 132580 128010 131230 147170 116850 155150 127140 161660 167330 231090 179010 204790 237670 272070 319220 254180 266670 341610 141270 142690 132880 150040 121680 157820 129930 154650 158490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 381660000 14925 3622 14132 28462;28463 22826 22826 1 9606 Homo sapiens 0.09693963650920523 KTGNFQVTELGR Unmodified 1348.7099 0.709913 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 1 1.5 0.5 1 1 44.571 44.612 3 0.0002117 11955 20230619_1881_Aki_TMTPro18x_K_F2 100.22 79.702 195590 119330 158300 198610 188820 243880 198590 204420 265940 247290 288000 325830 295910 268460 230680 275780 294650 288890 180280 110000 164660 194440 194470 242060 201740 212730 267910 250090 294940 325100 298800 279070 239490 277670 281260 274270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 414500000 14926 3312 14133 28464;28465 22827 22827 1 9606 Homo sapiens 0.049506435122111725 KTGNQHFGYLYGR Unmodified 1539.7583 0.75826017 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;B4DG89 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 1 5.5 0.5 1 1 39.514 39.603 4 0.018438 9359 20230619_1885_Aki_TMTPro18x_K_F5 63.8 48.412 72492 52697 70562 83010 77662 79604 86402 73701 99936 89449 90422 92638 91909 79345 90451 84915 92137 89674 66970 48506 72021 81237 80304 80606 86988 76186 100650 89687 93314 93407 93695 82582 92062 85540 88122 85132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113110000 14927 534 14134 28466;28467 22828 22828 1 9606 Homo sapiens 0.009971371521487526 KTGQAPGYSYTAANK Unmodified 1555.7631 0.76307078 2752 C9JFR7;G4XXL9;P99999 CYCS Cytochrome c yes no 0 0 1 3 0 1 40.387 40.443 3 0.033221 9854 20230619_1882_Aki_TMTPro18x_K_F3 48.351 30.434 27711 25453 31315 32031 30726 21800 35510 38116 26315 29967 42811 34660 43717 31331 37889 37020 43095 32195 25671 23347 31494 31697 31952 23227 35275 37597 27981 30826 43135 34917 44264 32744 38907 36850 41107 30670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 259000000 14928 2752 14135 28468 22829 22829 1 9606 Homo sapiens 0.007419765042413928 KTGQPEELVSCSDCGR Unmodified 1821.7985 0.79854636 327 A0A994J414;A0A024R582;J3KMZ8;A0A994J6A8;Q92785;A0A994J426;A0A994J6N1 DPF2 Zinc finger protein ubi-d4 yes no 0 0 1 4 0 1 40.149 40.191 3 0.005065 9655 20230619_1883_Aki_TMTPro18x_K_F4 69.111 64.72 21633 15497 23210 20900 20147 22337 21027 22953 24790 26149 31606 33208 28572 25537 24845 34722 32907 28270 20000 14239 23383 20688 21194 22490 21290 23490 25310 26460 31978 33141 29094 27056 25829 34357 31375 26936 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19906000 14929 327 14136 28469 22830 22830 1 9606 Homo sapiens -0.07948097092571516 KTGQPMINLYTDR Unmodified 1535.7766 0.77661235 2041 Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637-2;P35637;Q70T18 FUS RNA-binding protein FUS yes no 0 0 1 2.5 0.5 1 1 47.212 47.289 3 0.0016481 12870 20230619_1882_Aki_TMTPro18x_K_F3 79.81 66.978 762180 580080 708700 790570 769040 1018500 906450 842500 1032800 889310 875950 867390 948980 760940 917170 839380 927450 821860 704050 532920 726100 783680 799260 1007900 909530 874170 1038500 896070 909400 877770 964410 792830 933270 841660 886550 781180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 364430000 14930 2041 14137 28470;28471 22831;22832;22833 22832 3 9606 Homo sapiens 0.030155110118130324 KTGSPGSPGAGGVQSTAK Unmodified 1585.806 0.80599822 419 A0A024R6Z0;O43237-2;O43237;J3KRI4;J3KRZ2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 1 2 0 1 36.343 36.401 4 3.7411E-07 8255 20230619_1881_Aki_TMTPro18x_K_F2 118.53 105.33 18112 12347 22754 24797 38321 41202 30337 36782 27124 24270 36584 32715 29487 23558 41501 17154 27678 28292 16765 11408 22976 24205 38323 40287 30973 37514 28172 25444 36781 32520 30854 24282 41091 18047 26620 26752 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23973000 14931 419 14138 28472 22834 22834 1 9606 Homo sapiens 0.03652746561670028 KTIPSWATLSASQLAR Unmodified 1728.9523 0.95226853 4054 Q5SSJ5;Q5SSJ5-2;B0QZK4;Q5SWC8 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 1 7 0 1 56.469 56.527 3 0.00072862 16432 20230619_1887_Aki_TMTPro18x_K_F7 73.498 52.627 104820 106270 91572 94845 101420 80599 115500 135000 109190 102170 109860 85628 88109 70093 119130 103060 89968 81223 96971 97158 94263 96706 104680 83990 115500 133190 111580 104420 111640 87293 92021 74562 118900 101880 86302 77409 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 252400000 14932 4054 14139 28473 22835 22835 1 9606 Homo sapiens 0.11695048797582785 KTPESKPTILVK Unmodified 1339.8075 0.80750177 2010 Q9Y3B9;A8K201;A0JLN3 RRP15 RRP15-like protein yes no 0 0 2 4 0 1 44.761 44.806 4 0.01724 11681 20230619_1883_Aki_TMTPro18x_K_F4 67.275 36.448 67274 131500 82711 79428 75144 143630 84320 80014 76202 96658 100300 97726 97085 76745 107500 93529 142140 102680 62864 119760 82682 85474 79306 138930 84287 86558 79136 96832 101660 98433 99680 80791 110940 94277 135390 97573 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79700000 14933 2010 14140 28474 22836 22836 1 9606 Homo sapiens 0.1511903238836112 KTPIAVR Unmodified 783.49667 0.49667274 1490 B4DWK8;A0A384P5Q0;P04040 CAT Catalase yes no 0 0 1 4 0 1 36.228 36.274 3 0.082626 8038 20230619_1883_Aki_TMTPro18x_K_F4 43.448 23.961 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14934 1490 14141 28475 22837 22837 1 9606 Homo sapiens 0.09626427313844488 KTPLALAGSPTPK Unmodified 1279.75 0.7499869 1591 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A669KAV7;O95785-4;O95785-3;A0A2R8YFV2;O95785 WIZ Protein Wiz yes no 0 0 1 5 0 1 47.413 47.489 3 0.0017188 12701 20230619_1885_Aki_TMTPro18x_K_F5 79.004 60.843 28540 20856 27279 29531 29276 35588 28142 29752 37158 28657 35890 41128 32326 28348 32617 28888 37614 42339 26363 19172 27861 29175 30266 35375 28730 30773 37256 29413 36762 40725 33130 29700 33418 29785 35973 40054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21258000 14935 1591 14142 28476 22838 22838 1 9606 Homo sapiens 0.12130190182779188 KTPNNPSCNADLINR Unmodified 1712.8264 0.82641609 1875 A0A994J595;P54289-4;P54289-5;P54289;Q9UIU0;P54289-3;P54289-2;A0A994J5M8;H0Y715;Q9UDQ3 CACNA2D1;WUGSC:H_DJ0560O14.1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 1 8 0 1 39.033 39.019 3 2.9802E-14 9073 20230619_1888_Aki_TMTPro18x_K_F8 185.67 168.18 40014 46701 54973 43759 42929 38006 58699 51465 33632 45599 59177 32952 40459 26487 71877 19539 23920 13140 37213 42695 54348 44441 45772 39239 57534 51506 36695 45952 58593 33856 43243 27206 69597 19574 23275 12587 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32273000 14936 1875 14143 28477 22839 22839 1 9606 Homo sapiens -0.0014840605017525377 KTPTEAPADCR Unmodified 1244.5819 0.58193529 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H962;A0A994J6V7;Q8IWJ0;Q5H963;A0A994J4V6;A0A1B0GXC7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 1 4.5 0.5 1 1 32.226 32.297 3 8.3717E-05 6442 20230619_1883_Aki_TMTPro18x_K_F4 109 85.621 45475 20251 62070 53811 78205 90271 58847 72577 65979 49705 86837 101760 75037 78671 81543 31611 101500 96995 42057 18854 61862 51998 79432 88012 60757 74714 67546 53061 87714 100040 77370 79419 83614 36359 96888 91450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36048000 14937 594 14144 28478;28479 22840;22841 22840 2 9606 Homo sapiens -0.03057240073326284 KTQDQISNIK Unmodified 1173.6354 0.63535107 157 A0A024R1S8;Q14847;A8K1D2;Q14847-2;C9J9W2;Q14847-3 LASP1 LIM and SH3 domain protein 1 yes no 0 0 1 1 0 1 40.936 40.936 3 0.00039105 10522 20230619_1880_Aki_TMTPro18x_K_F1 110.98 52 57197 34585 74245 67823 88166 100810 78619 89490 91937 69369 99900 110090 92667 80494 97264 50466 106770 99726 52933 31960 74177 66145 90217 99094 80288 91627 93115 72443 101890 108810 95029 82459 99075 54119 102010 94224 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55034000 14938 157 14145 28480 22842 22842 1 9606 Homo sapiens 0.055478807008285 KTQNDVLHAENVK Unmodified 1494.7791 0.77905519 2184 P35241;B0YJ88;P35241-5;A0A2R8Y5S7;P35241-4;B7Z2S7;P35241-2;P35241-3;Q9NST9;A0A2R8Y4H6 RDX;DKFZp434I0812 Radixin yes no 0 0 1 6 0 1 39.309 39.397 4 0.0014318 9301 20230619_1886_Aki_TMTPro18x_K_F6 84.874 57.845 146000 123690 148260 161060 157160 166690 183870 155440 183920 191760 203160 180690 200330 149290 209550 178700 191390 161460 135050 113530 150640 159630 163140 167900 183800 160640 188170 191500 207320 182890 204790 156670 211730 178270 183090 153650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105110000 14939 2184 14146 28481 22843 22843 1 9606 Homo sapiens 0.05145682741135715 KTQTVCNFTDGALVQHQEWDGK Unmodified 2561.1969 0.19688527 2888 E7DVW5;Q01469;I6L8B7 FABP5 Fatty acid-binding protein, epidermal yes no 0 0 1 7.5 0.5 1 1 51.392 51.469 4 4.2524E-23 14091 20230619_1888_Aki_TMTPro18x_K_F8 173.65 162.02 797000 780710 934280 920230 807490 867650 970190 986760 756850 1182900 1033500 853230 1018700 791250 1081800 820690 807700 597370 738920 715520 935670 917650 851820 884380 962990 1004900 796160 1173800 1046000 878750 1042000 820120 1082300 812930 774000 570520 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2856600000 14940 2888 14147 28482;28483 22844;22845;22846;22847 22845 4 9606 Homo sapiens -0.021265300323193514 KTRPSSTVIK Unmodified 1115.6663 0.66625727 4054 Q5SSJ5;Q5SSJ5-2;Q5SSJ5-3;B4E0N8 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 2 6 0 1 34.335 34.382 4 0.039681 7395 20230619_1886_Aki_TMTPro18x_K_F6 60.547 13.942 118510 108280 143060 110130 246860 208840 199550 182360 146810 25968 33118 24623 23370 18959 74619 15873 26360 22382 109850 99126 144600 112470 246190 203240 202170 183900 147710 34765 39021 25017 26601 19599 71984 16556 25660 21204 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58981000 14941 4054 14148 28484 22848 22848 1 9606 Homo sapiens 0.1130507880575351 KTSATVGPK Unmodified 887.50763 0.50763136 3459 P16104 H2AFX Histone H2AX yes yes 0 0 1 3 0 1 36.005 36.061 3 0.0089162 7986 20230619_1882_Aki_TMTPro18x_K_F3 70.488 25.176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14942 3459 14149 28485 22849 22849 1 9606 Homo sapiens 0.059377848974691005 KTSAYGPPTR Unmodified 1076.5615 0.56145784 638 B4DMD3;B4DY34;A0A024RAW9;Q9Y2W2 WBP11 WW domain-binding protein 11 yes no 0 0 1 3 0 1 34.355 34.416 3 0.0040129 7337 20230619_1882_Aki_TMTPro18x_K_F3 64.121 42.87 82521 55457 79782 90512 106900 113790 111230 112110 116640 101820 133530 106930 91473 81148 117480 62844 91041 66724 76199 51087 81758 88772 108970 113210 112060 114340 119070 103600 134230 107450 95890 83572 117230 63879 87195 63423 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48320000 14943 638 14150 28486 22850 22850 1 9606 Homo sapiens 0.02623957329183213 KTSFVNFTDICK Unmodified 1458.7177 0.71770049 2657 Q6IBR8;B5BU01;P20042;Q96I16 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 1 3 0 1 55.234 55.275 3 1.7066E-05 16472 20230619_1882_Aki_TMTPro18x_K_F3 130.07 105.28 190200 172130 206250 203200 197710 206340 220920 205530 174420 228050 193630 136380 144160 98700 210760 99684 95790 44144 176110 157800 208020 202770 206350 208470 220050 210640 181360 226300 195380 141250 151520 103210 206170 97480 92405 42706 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255780000 14944 2657 14151 28487 22851 22851 1 9606 Homo sapiens 0.006690347174753697 KTTEEQVQASTPCPR Unmodified 1730.8257 0.82574739 2320 B2RDN4;Q14137;A8K3R2 BOP1 Ribosome biogenesis protein BOP1 yes no 0 0 1 5.5 0.5 1 1 36.953 37.033 3 5.8024E-08 8378 20230619_1886_Aki_TMTPro18x_K_F6 138.01 123.22 64061 49495 59956 66663 69380 74036 70998 72835 73293 72564 73800 72724 80319 53825 67013 70189 72015 60666 59183 45463 61428 65994 71343 74271 71575 74477 74585 73333 75968 73177 81032 57061 68665 69738 68776 57763 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67681000 14945 2320 14152 28488;28489 22852;22853 22853 2 9606 Homo sapiens -0.010432454898818833 KTTHFVEGGDAGNR Unmodified 1487.7117 0.71170391 3473;3341 P18124;A0A024R814;A8MUD9;O95036 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 no no 0 0 1 5.5 0.5 1 1 32.894 32.953 4 1.7052E-11 6850 20230619_1886_Aki_TMTPro18x_K_F6 149.3 136.38 16227 10588 14353 15959 19037 22589 18437 17913 23187 22508 19276 21609 21384 16391 20166 19153 22874 13512 14971 9744.8 14819 15750 19411 22220 18763 18740 23212 22478 20071 21778 21692 17224 20667 18897 21795 12928 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34587000 14946 3473;3341 14153 28490;28491 22854 22854 1 9606 Homo sapiens -0.01264347469805216 KTTHFVEGGDAGNREDQINR Unmodified 2243.0679 0.067920004 3473;3341 P18124;A0A024R814;A8MUD9;O95036 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 no no 0 0 2 4 0.816 1 1 1 34.396 34.462 5 8.9273E-23 7310 20230619_1885_Aki_TMTPro18x_K_F5 190.79 174.89 40623 32967 43064 41946 44597 47869 49573 42535 43658 43650 47023 45033 46783 34541 43626 36375 38324 31364 37580 30256 43561 41703 46291 47837 49510 43876 44951 44090 48072 45283 47551 36087 44082 36280 36672 29868 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1121700000 14947 3473;3341 14154 28492;28493;28494 22855;22856 22856 2 9606 Homo sapiens -0.003891238801770669 KTTTLSGTAPAAGVVPSR Unmodified 1712.9421 0.94209778 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;A0A024R2V0;P27816-4;Q86Y04;P27816-5;B5MEG9;H7C4C5;H0Y2V1;F8W9U4;B4DSQ1 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 1 4 0 1 42.759 42.803 3 7.2981E-24 10742 20230619_1883_Aki_TMTPro18x_K_F4 205.02 186.88 94005 72487 94237 90392 83270 86067 100550 97455 90377 109500 109110 106880 105810 80706 113340 87364 101300 71067 86895 66527 95517 89800 87727 87644 100110 99108 93477 109860 110950 107670 108350 84481 114300 86890 96831 67783 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121870000 14948 2902 14155 28495 22857 22857 1 9606 Homo sapiens 0.11414441072292902 KTVGVEPAADGK Unmodified 1170.6245 0.62445203 3051 H0YKD8;P46779;P46779-2;P46779-3;Q59F34;H0YMF4;P46779-4;P46779-5;H0YLP6 RPL28 60S ribosomal protein L28 yes no 0 0 1 6 0 1 40.183 40.276 3 0.0014252 9671 20230619_1886_Aki_TMTPro18x_K_F6 85.909 65.132 71999 58734 104650 94925 122390 109430 116760 103040 94615 100760 113430 88399 93189 68491 119240 57115 86608 63581 66824 54056 103780 93056 125200 109430 117390 105670 98425 101540 114520 89617 96849 70781 118640 58166 83022 60405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118930000 14949 3051 14156 28496 22858 22858 1 9606 Homo sapiens 0.04596478326539 KTVTAMDVVYALKR Unmodified 1593.8912 0.89124818 2211 B2R4R0;P62805 HIST1H4H;HIST1H4A Histone H4 yes no 0 0 2 6.5 0.5 1 1 57.479 57.541 4 2.6992E-08 17084 20230619_1886_Aki_TMTPro18x_K_F6 146.2 114.97 234230 388070 316820 291530 301350 124410 346900 266730 93134 157010 166000 75085 72128 51290 215950 53076 60429 46095 218610 353970 314350 300910 312870 142840 339400 260150 112360 161600 162610 79376 83125 53909 207580 53459 59222 43907 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 189640000 14950 2211 14157 28497;28498 22859 22859 1 9606 Homo sapiens 0.11805820493782448 KVAAIEALNDGELQK Unmodified 1597.8675 0.86753585 1242 B4E0U6;A0A140VKA6;P50502;Q0IJ56;Q1XBU6;B7ZA40;H7C3I1;Q3KNR6;Q8IZP2;F6VDH7;D6W507 ST13;ST13P4;hCG_1990625 Hsc70-interacting protein;Putative protein FAM10A4 yes no 0 0 1 6.5 0.5 2 2 54.405 54.476 3;4 1.4853E-18 15798 20230619_1886_Aki_TMTPro18x_K_F6 166.09 131.91 1247600 1148800 1323900 1374900 1255000 1569900 1499500 1301900 1364200 1239400 1352300 1143300 1161300 960570 1422700 951880 1037900 921130 1155100 1053200 1338200 1372400 1316100 1566200 1493500 1347600 1396300 1253400 1379100 1159000 1202900 996620 1418200 956780 995980 875640 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1100500000 14951 1242 14158 28499;28500;28501;28502 22860;22861;22862;22863 22860 4 9606 Homo sapiens 0.09251678260920926 KVACIGAWHPAR Unmodified 1364.7136 0.71355858 3567 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;Q49AJ9;B5MCW2;H7C422;B2R7Y3;Q92901 RPL3;rpl3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like yes no 0 0 1 6 0 1 41.266 41.36 4 1.9234E-13 10091 20230619_1886_Aki_TMTPro18x_K_F6 178.67 150.7 269000 343040 340150 286830 403590 306300 408390 320730 282540 150510 159810 91534 88612 75425 260930 77593 92125 52350 250150 313290 340130 295060 412590 309280 407410 322380 289670 159570 166630 95324 100760 78466 251960 77152 89501 50136 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 173450000 14952 3567 14159 28503 22864;22865 22864 2 9606 Homo sapiens 0.04579034805078663 KVAPAPAVVK Unmodified 978.6226 0.62260154 3722 P62424;Q5T8U3 RPL7A 60S ribosomal protein L7a yes no 0 0 1 4 0 1 42.073 42.116 3 1.9554E-07 10457 20230619_1883_Aki_TMTPro18x_K_F4 125.75 99.074 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14953 3722 14160 28504 22866 22866 1 9606 Homo sapiens 0.1324351409926976 KVAPQNDSFGTQLPPMHQQQR Oxidation (M) 2422.1812 0.18117562 2644 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1 FUBP1 Far upstream element-binding protein 1 yes no 0 1 1 1.5 0.5 1 1 39.681 39.716 4 0.040202 9668 20230619_1881_Aki_TMTPro18x_K_F2 47.155 38.134 84579 67452 76560 75839 87933 97277 91057 88357 115660 63184 56875 46848 62284 49779 61263 61960 52459 52356 78134 61837 78609 76207 90580 96542 92336 90196 113950 64830 61300 48467 63342 51915 61833 61536 50277 49830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50806000 14954 2644 14161 28505;28506 22867 22867 1595 1 9606 Homo sapiens 0.026972282413225912 KVAVAAASKPHVEIR Unmodified 1574.9257 0.92565985 2949 P29762;F1T0F7;B5MCB5 CRABP1 Cellular retinoic acid-binding protein 1 yes no 0 0 2 4 0 1 40.828 40.87 5 6.1486E-08 9896 20230619_1883_Aki_TMTPro18x_K_F4 141 127.58 227050 216400 246570 292520 574790 490420 457820 355930 300100 263130 292600 137720 104670 70106 363580 48687 68633 46363 210320 198630 254000 291470 566230 478080 463050 370500 314350 267130 291850 143420 124590 73625 347150 50202 68364 44142 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 413320000 14955 2949 14162 28507 22868 22868 1 9606 Homo sapiens 0.16119404696883066 KVAVATPAKK Unmodified 1011.6441 0.64406526 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;A0A7I2V2S8 NCL Nucleolin yes no 0 0 2 5.5 0.5 1 1 38.913 39.001 4 0.037241 9120 20230619_1885_Aki_TMTPro18x_K_F5 61.435 47.666 36735 28427 64895 47559 109680 96738 77064 76135 52148 15376 22378 24915 19089 10546 57930 8176.5 20569 14329 34172 26180 64123 47088 109160 93624 78818 77542 53284 19126 24345 24394 21370 11252 55881 8761.7 19998 13567 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97897000 14956 1658 14163 28508;28509 22869 22869 1 9606 Homo sapiens 0.1387089912797137 KVCDIAAELAR Unmodified 1244.6547 0.6547063 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;E7EQT5;E7ETV3;E7EV12;H0Y3V4 IPO5;RANBP5 Importin-5 yes no 0 0 1 8 0 1 51.546 51.623 3 0.0012418 14219 20230619_1888_Aki_TMTPro18x_K_F8 90.412 62.763 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14957 782 14164 28510 22870 22870 1 9606 Homo sapiens 0.04216513720098192 KVCSTNDLK Unmodified 1063.5332 0.53319418 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 1 4.5 3.5 1 1 39.138 39.131 3 0.00047154 9123 20230619_1888_Aki_TMTPro18x_K_F8 105.46 50.008 172290 89344 254820 247650 368320 384680 282870 349930 230160 174200 296730 291670 191220 181170 291000 70891 218870 145710 159580 83175 253620 238570 370730 377430 288840 354930 239790 188930 296880 286850 203210 184600 288910 78018 209610 137880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 173080000 14958 261 14165 28511;28512 22871;22872 22872 2 9606 Homo sapiens 0.003968913575818078 KVDAAELLR Unmodified 1013.5869 0.58694431 1809 A0A8V8NBT1;Q12769 NUP160 Nuclear pore complex protein Nup160 yes no 0 0 1 7.5 0.5 1 1 47.169 47.237 3 0.039434 12371 20230619_1888_Aki_TMTPro18x_K_F8 47.154 18.458 171770 145380 166370 182540 179280 215630 191750 184810 209020 185020 182810 176640 211550 159600 197300 206850 185390 176100 158820 133390 169780 181680 185680 214770 193140 190960 210920 186790 190040 179210 214170 167750 200270 205380 177430 167620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89858000 14959 1809 14166 28513;28514 22873 22873 1 9606 Homo sapiens 0.08069431851617992 KVDAETVGR Unmodified 973.51926 0.51925868 2076 A8K5J1;P11172;B5LY71;P11172-3;B5LY64;B5LY69;P11172-2;P11172-4;E9PFD2;B5LY67 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase;Orotidine 5'-phosphate decarboxylase yes no 0 0 1 5 0 1 35.239 35.329 3 0.037294 7690 20230619_1885_Aki_TMTPro18x_K_F5 56.725 36.938 181320 72186 208900 224760 290990 325770 223450 268550 260310 192000 328730 382330 271820 265130 261740 121800 351370 324120 167330 67504 211220 215370 293960 320050 230560 276190 265420 203980 331900 375060 279000 269780 270460 136540 335140 305800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163250000 14960 2076 14167 28515 22874 22874 1 9606 Homo sapiens 0.031439819208117115 KVDDIICDSR Unmodified 1219.5867 0.58668632 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;A0A7I2V3I5;A0A7I2V2T9;A0A7I2V3J7;A0A7I2V682;A0A7I2V407;A0A7I2V2J0;A0A7I2V5R0;E7EPA6;A0A7I2V2R2;A0A7I2V5T9;C9J296 LAMB1 Laminin subunit beta-1 yes no 0 0 1 4 0 1 45.083 45.127 3 0.023339 11755 20230619_1883_Aki_TMTPro18x_K_F4 62.088 43.952 173540 131400 141270 143230 178750 190750 188160 198470 215290 217910 195800 191320 241250 160300 192330 272720 218500 187670 160150 120450 146780 144390 183010 189510 189990 202600 217180 218340 203740 194540 242190 172410 198310 267240 208590 179270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201660000 14961 3015 14168 28516 22875 22875 1 9606 Homo sapiens -0.014323559305694289 KVDEAIALFQK Unmodified 1260.7078 0.70778773 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32 VARS Valine--tRNA ligase yes no 0 0 1 2 0 1 59.847 59.86 4 0.001583 18628 20230619_1881_Aki_TMTPro18x_K_F2 89.403 64.549 39518 40010 49936 42340 46668 46871 50566 45621 38757 47623 45840 29990 36946 23360 66685 25524 25267 15991 36675 36629 49760 42667 48732 47057 50418 46749 40476 47454 46274 31033 39290 24469 64770 25225 24512 15323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63964000 14962 725 14169 28517 22876 22876 1 9606 Homo sapiens 0.0878621477438628 KVDNDYNALR Unmodified 1206.5993 0.59929991 3329 Q6NX55;O94763-3;O94763;O94763-4 C19orf2;URI1 Unconventional prefoldin RPB5 interactor 1 yes no 0 0 1 6 0 1 39.739 39.828 3 0.0031096 9485 20230619_1886_Aki_TMTPro18x_K_F6 79.889 56.653 45381 35560 44848 46514 45850 48340 50240 45593 57334 55479 63742 68629 60253 51354 56508 69674 76764 69718 41947 32651 45626 46096 47651 48686 50622 47059 58249 55937 64977 68490 61451 54498 58715 69682 73202 66244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86775000 14963 3329 14170 28518 22877 22877 1 9606 Homo sapiens 0.004264235239588743 KVDWLTEK Unmodified 1017.5495 0.54949617 2105;3883;543 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;B4DNH2;J3KSZ0;J3QL43;B4DKP9;J3KTN0;J3QL52;Q14240;Q14240-2;E7EQG2;Q9NZE6;B4DJX6;Q96B07;P38919;A0A024R8W0;I3L3H2 EIF4A1;EIF4A2;EIF4A3;DDX48 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 0 0 1 7 0.816 1 1 1 51.286 51.364 3 0.0022359 14046 20230619_1888_Aki_TMTPro18x_K_F8 109.42 59.296 750520 597570 685430 740890 741960 876580 871740 787740 906830 880120 821050 721350 893150 700510 881240 833030 816420 734400 693370 548340 703050 738150 770160 873920 872220 813440 918680 879920 849150 739050 908200 730610 892430 829750 781200 698880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2392400000 14964 2105;3883;543 14171 28519;28520;28521 22878;22879 22879 2 9606 Homo sapiens 0.041423405859859486 KVEAPFIPK Unmodified 1027.6066 0.60661712 456;2295 A8K8B9;A0A024R7J0;A0A8V8TL59;P17612-2;P17612;A0A7I2V5J4;P22612;P22694-4;B4E2L0;P22694-2;P22694-9;P22694-6;P22694-7;P22694-5;P22694;P22694-3;B2RB89;P22694-10;A0A087WVC4;B7ZA00 PRKACA;PRKACG;PRKACB cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit gamma;cAMP-dependent protein kinase catalytic subunit beta no no 0 0 1 2 0 1 49.952 50.011 3 0.001119 14443 20230619_1881_Aki_TMTPro18x_K_F2 91.855 46.694 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14965 456;2295 14172 28522 22880 22880 1 9606 Homo sapiens 0.09391807862357382 KVEAQLQELQVK Unmodified 1411.8035 0.80347903 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5 MYH9 Myosin-9 yes no 0 0 1 7.5 0.5 1 1 51.951 52.026 3 5.7409E-05 14369 20230619_1888_Aki_TMTPro18x_K_F8 117.79 83.61 464310 367640 453220 447540 533790 534700 585980 509010 587910 660260 614040 675680 753730 563610 553390 782540 708550 693930 429160 337300 462500 446640 548900 533690 587670 525930 600540 659500 635170 681350 754900 596860 576060 777200 676330 660090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 554770000 14966 148 14173 28523;28524 22881 22881 1 9606 Homo sapiens 0.11404942894637315 KVEDLAR Unmodified 829.46577 0.46576654 4606 Q9NVP1;Q4ZG72;Q8N254;H7C452;Q59FR7 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 0 1 5.5 0.5 1 1 37.268 37.348 3 0.056803 8395 20230619_1885_Aki_TMTPro18x_K_F5 60.682 26.679 215450 118330 231120 234050 321600 317210 268760 283700 301790 194880 257270 222280 244730 199260 253460 124910 262800 199710 198930 109430 234810 227730 325150 313530 275090 289680 303460 202750 265330 223640 250520 202530 257330 131370 250920 189130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 357840000 14967 4606 14174 28525;28526 22882 22882 1 9606 Homo sapiens 0.044212292089468974 KVEDLFLTFAK Unmodified 1309.7282 0.72818882 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 2.5 0.5 1 1 62.761 62.78 3 6.7666E-05 19581 20230619_1882_Aki_TMTPro18x_K_F3 116.84 80.144 381810 362860 382490 389120 355450 409790 408140 423610 470910 454990 431560 454290 458790 378410 520060 460010 416590 424740 353410 332300 388150 391320 372940 413240 410530 432600 474730 458090 446200 458520 470090 397160 521710 459240 399650 403770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217480000 14968 1022;3868 14175 28527;28528 22883 22883 1 9606 Homo sapiens 0.08571385434220247 KVEDMMK Unmodified 879.41941 0.41940998 3447 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 0 1 6.5 0.5 1 1 44.219 44.306 3 0.041496 11005 20230619_1887_Aki_TMTPro18x_K_F7 66.692 2.6009 2138800 1599900 1879500 1706300 2009200 2287400 2059500 2018300 2812200 1779800 1691500 1455500 1828600 1425300 1816700 1831700 2056200 1340300 1974600 1466400 1931700 1723100 2080600 2263000 2096100 2073600 2774900 1804300 1792800 1492700 1861400 1492800 1860500 1807000 1960100 1280900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1295200000 14969 3447 14176 28529;28530 22884;22885;22886 22886 3 9606 Homo sapiens -0.02512295009000809 KVEEAEPEEFVVEK Unmodified 1660.8196 0.8195826 1933 A4D177;Q13185;C9JMM0;B8ZZ43;S4R2Y4 CBX3 Chromobox protein homolog 3 yes no 0 0 1 2.5 1.12 1 1 1 1 51.276 51.311 3 1.4207E-11 14711 20230619_1882_Aki_TMTPro18x_K_F3 173.19 148.4 757880 615240 683880 740330 632520 789320 768670 746070 842010 996540 918890 795580 1066200 794750 744990 1122100 973610 917710 700190 564340 700570 738070 665630 793350 769560 771810 857680 987470 944390 817450 1067600 837580 777900 1109800 928950 874010 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1057099999.9999999 14970 1933 14177 28531;28532;28533;28534 22887;22888;22889 22889 3 9606 Homo sapiens 0.015605595501938296 KVEEEDEEEEEEEEEEEEEEDE Unmodified 2797.9945 0.99450342 3240 O15347 HMGB3 High mobility group protein B3 yes yes 0 0 1 1 0 1 46.696 46.696 3 0.0043988 13008 20230619_1880_Aki_TMTPro18x_K_F1 65.16 64.3 34488 25346 30756 36849 43878 57012 52476 50917 62693 49823 41229 33432 45205 33112 31414 47720 43066 30873 31841 23305 31815 36505 44853 55934 52676 52375 62417 49948 43414 34707 45340 34953 32916 46733 41008 29546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133240000 14971 3240 14178 28535 22890 22890 1 9606 Homo sapiens -0.3325740557697827 KVEEEEDESALK Unmodified 1404.662 0.66201933 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 1 2 0.816 1 1 1 42.852 42.893 3 2.1346E-05 11197 20230619_1881_Aki_TMTPro18x_K_F2 125.97 98.331 244590 157550 186520 228420 198320 239750 193750 221900 322240 300230 333700 348000 348220 299090 193850 359360 405060 335590 225420 144950 194720 224870 205530 241060 199680 229980 321400 300780 342250 349440 347840 313220 212370 358350 385040 319250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 658550000 14972 3892 14179 28536;28537;28538 22891;22892;22893 22892 3 9606 Homo sapiens -0.02412519989138673 KVEEEEDESALKR Unmodified 1560.7631 0.76313036 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 2 2.5 0.5 1 1 39.287 39.347 4 0.016354 9472 20230619_1881_Aki_TMTPro18x_K_F2 70.47 59.654 197940 221520 297360 198470 339080 225010 321600 254610 210590 247320 254010 104500 194250 96030 401330 99359 96876 66864 184210 202470 293670 203140 346620 226800 321870 257910 222780 245830 255450 112570 209100 99939 385970 98986 95425 63962 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 272690000 14973 3892 14180 28539;28540 22894 22894 1 9606 Homo sapiens 0.005179317135798556 KVEELQACVETAR Unmodified 1531.7664 0.7664416 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 5 0.816 1 1 1 46.944 47.024 3 4.9855E-16 12503 20230619_1885_Aki_TMTPro18x_K_F5 183.41 168.02 1426400 1192100 1324100 1397800 1352200 1391800 1508600 1412100 1296500 1540800 1499700 1467600 1616100 1267600 1610200 1575500 1465200 1289900 1318400 1093100 1354300 1395000 1405100 1408900 1505900 1445100 1342400 1547300 1534600 1486500 1644300 1330500 1629200 1562700 1402100 1228800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 733590000 14974 349;3906 14181 28541;28542;28543 22895;22896;22897 22896 3 9606 Homo sapiens 0.021829032865753106 KVEESYTILCQR Unmodified 1524.7606 0.76062794 1383 E9PMR6;A0A2X0SFF5;Q9NZN5-2;Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 0 0 1 8 0 1 47.409 47.467 3 2.278E-07 12452 20230619_1888_Aki_TMTPro18x_K_F8 162.72 142.62 83900 66528 65855 78787 72126 91819 84486 86593 91946 103750 98280 97811 115440 83447 92772 114810 110700 110650 77427 61021 68592 78723 74896 91714 84703 89260 93588 103730 101270 99095 116110 88284 95845 114570 105740 105140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41369000 14975 1383 14182 28544 22898 22898 1 9606 Homo sapiens 0.01923804774924065 KVEEVLEEEEEEYVVEK Unmodified 2108.0049 0.004876771 3135 J3KS05;Q6IBN6;P83916;B5MD17;K7ELA4;C9JWS9 CBX1 Chromobox protein homolog 1 yes no 0 0 1 2 0 1 61.657 61.667 3 0.039898 19329 20230619_1881_Aki_TMTPro18x_K_F2 47.68 31.737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14976 3135 14183 28545 22899 22899 1 9606 Homo sapiens -0.004805472314274084 KVEGDIWALQK Unmodified 1285.703 0.7030367 325 A0A024R578;Q13405;H0YDP7;Q59GE9 MRPL49 39S ribosomal protein L49, mitochondrial yes no 0 0 1 8 0 1 53.873 53.944 3 0.0026287 15254 20230619_1888_Aki_TMTPro18x_K_F8 80.17 53.638 271130 251140 301130 273920 320100 357040 344400 359750 314760 333640 334450 242630 315030 208540 376820 262810 226350 207640 251140 230050 303550 276050 331430 354840 345070 366410 323270 335670 340950 249540 324430 219400 373150 260550 217900 197870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278330000 14977 325 14184 28546 22900 22900 1 9606 Homo sapiens 0.07161330631629426 KVEGFDLVQK Unmodified 1161.6394 0.63937381 4102 Q6FHZ7;Q99541;B4DJK9 ADFP;PLIN2 Perilipin;Perilipin-2 yes no 0 0 1 4.5 3.5 1 1 51.223 51.3 3 0.0033077 14123 20230619_1888_Aki_TMTPro18x_K_F8 78.488 31.882 150860 112230 106950 130640 127740 155290 132670 94827 157830 157080 143380 121760 169680 119940 115880 205810 138310 144790 139080 102950 112770 130670 131440 153790 134140 102840 158890 154460 148720 125330 169640 128370 120530 201740 132160 138150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234770000 14978 4102 14185 28547;28548 22901;22902 22902 2 9606 Homo sapiens 0.06501970194540263 KVELPVPTHR Unmodified 1174.6822 0.68224168 438 K7EKI4;K7ELF1;K7ELQ0;K7ES61;A0A024R7C5;X6RAY8;Q9BYD3-2;Q9BYD3 MRPL4 39S ribosomal protein L4, mitochondrial yes no 0 0 1 2.5 0.5 1 1 40.531 40.597 4 0.00019896 10082 20230619_1881_Aki_TMTPro18x_K_F2 121.9 101.59 326550 256610 331270 355760 416800 433310 406860 429800 524120 432760 469820 494050 519260 455940 420130 441800 526140 488600 301920 235760 337550 352070 425840 432160 414390 439280 524950 439280 486800 497330 523870 470800 434890 446840 502120 463720 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 119170000 14979 438 14186 28549;28550 22903;22904 22903 2 9606 Homo sapiens 0.10188785042646487 KVEQDLWNHAFK Unmodified 1513.7678 0.76776223 1767 E9PEK3;B1ALB4;Q8NB69;Q96N31;B4DLY0;E9PD50;A0A8I5KYV3;A0A8I5KSL3;Q92540-2;Q92540;Q92540-5;Q92540-4 SMG7 Protein SMG7 yes no 0 0 1 1 0 1 51.423 51.423 4 0.0020239 14944 20230619_1880_Aki_TMTPro18x_K_F1 73.624 51.149 32340 32995 35996 33624 28988 39736 37124 37192 39749 43978 35799 41536 45079 35939 38098 46164 46132 45972 29978 30196 36153 34011 30931 39657 37053 38345 40234 43999 37363 42063 45377 37813 39350 46191 44060 43667 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9131600 14980 1767 14187 28551 22905 22905 1 9606 Homo sapiens 0.031429054376530985 KVEQGLDFAVQGQLDVK Unmodified 1872.9945 0.99452728 275;1599 A0A024R3Z1;Q6NYC5;A0A669KB77;P11137-3;P11137 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 1 8 0 1 57.804 57.856 3 0.072766 16917 20230619_1888_Aki_TMTPro18x_K_F8 36.597 6.908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14981 275;1599 14188 28552 22906 22906 1 9606 Homo sapiens 0.09294979415244597 KVESLQEEIAFLK Unmodified 1532.845 0.84500949 3414 P08670;V9HWE1;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 0 1 6.6 1.02 1 1 2 1 69.886 69.92 3 0.0012144 18468 20230619_1887_Aki_TMTPro18x_K_F7 84.759 59.286 261780 240910 277510 248680 313100 374960 300530 310870 322880 393470 383300 386430 392140 308720 328690 391230 343540 422410 242370 220570 280990 252300 322250 368140 304590 324020 330510 392880 390770 389880 396690 325580 336550 393360 329100 400590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33979000000 14982 3414 14189 28553;28554;28555;28556;28557 22907;22908 22907 2 9606 Homo sapiens 0.09990078863347662 KVETLMVPSK Unmodified 1130.6369 0.63693097 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 1 2 0 1 49.23 49.292 3 0.028375 14155 20230619_1881_Aki_TMTPro18x_K_F2 59.306 35.701 129100 100080 123410 127290 123730 130900 124550 124250 147350 129590 130130 122330 127870 109760 143720 137020 138200 129640 119290 91865 125850 126370 128520 131960 126270 127560 148110 130500 134230 124140 131340 115080 145520 136870 132230 123240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194150000 14983 380 14190 28558 22909 22909 1 9606 Homo sapiens 0.07683798465245673 KVGFNPK Unmodified 788.45447 0.45447358 3455 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 0 0 1 4 0 1 41.652 41.695 3 0.029079 10274 20230619_1883_Aki_TMTPro18x_K_F4 60.76 39.253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14984 3455 14191 28559 22910 22910 1 9606 Homo sapiens 0.051784519054649536 KVGIVGK Unmodified 699.46431 0.46430998 3698 P61513;Q6P4E4;E9PEL3;G5E9R3 RPL37A 60S ribosomal protein L37a yes no 0 0 1 3.5 0.5 1 1 41.86 41.913 3 0.0061037 10442 20230619_1882_Aki_TMTPro18x_K_F3 91.065 46.373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14985 3698 14192 28560;28561 22911;22912 22911 2 9606 Homo sapiens 0.10255639910860737 KVGLIAAR Unmodified 826.53887 0.53887191 3734 P62917;B4DVG7;E9PKU4;E9PP36 RPL8 60S ribosomal protein L8 yes no 0 0 1 6 0 1 40.589 40.681 3 0.034917 9805 20230619_1886_Aki_TMTPro18x_K_F6 55.872 28.136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14986 3734 14193 28562 22913 22913 1 9606 Homo sapiens 0.11866402722216662 KVGYTPDWIFLLR Unmodified 1606.8871 0.88714908 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;A0A087WX41;P53675-2;P53675;A4FU99 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 1 6 0 1 62.987 63.035 3 1.0869E-07 19495 20230619_1886_Aki_TMTPro18x_K_F6 146.59 118.29 730440 634070 720780 774570 468270 574790 666850 533220 894120 937690 641100 861570 965930 819710 965970 893520 764870 802020 675600 581560 729530 768120 512550 595600 667720 559250 889040 923950 685730 875260 975380 850790 970730 892040 734020 762590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1654499999.9999998 14987 826 14194 28563 22914 22914 1 9606 Homo sapiens 0.10798099062367328 KVHVIFNYK Unmodified 1146.655 0.6549643 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;B4DHR1;K7EJB9;B4E2Y9 CALR;HEL-S-99n Calreticulin yes no 0 0 1 5.5 0.5 1 1 45.977 46.058 4 0.00016734 12146 20230619_1886_Aki_TMTPro18x_K_F6 120.15 104.58 873100 806470 987190 862800 919760 1197000 1182800 1052000 1050500 251850 242670 149090 104300 111170 700210 122540 147470 53071 808860 738610 992010 871660 968220 1181200 1172500 1063600 1042600 295660 281770 155550 139210 116390 667810 120990 145780 51489 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2136899999.9999998 14988 1691 14195 28564;28565 22915 22915 1 9606 Homo sapiens 0.0875030150227758 KVIDPVAPR Unmodified 993.59712 0.59711507 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 1 1.5 0.5 1 1 41.098 41.136 3 0.00032065 10569 20230619_1880_Aki_TMTPro18x_K_F1 120.09 99.787 214890 176330 209000 211080 231670 243560 242820 237750 268070 282310 315750 327140 294840 251770 272220 308920 326810 268340 198660 161730 213150 210790 239060 243750 245020 244480 273600 284210 320860 327470 300540 265090 280410 307190 311760 255510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 473570000 14989 3402 14196 28566;28567 22916 22916 1 9606 Homo sapiens 0.1000603957684234 KVIEEQLEPAVEK Unmodified 1510.8243 0.82427405 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;A0A804HJI0;A0A804HJA1;A0A804HKK7;H7C3W8 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 1 4.5 0.5 1 1 50.323 50.376 3 0.0021314 14146 20230619_1883_Aki_TMTPro18x_K_F4 74.296 49.914 112100 115140 123620 116900 155510 146650 162250 135030 124540 144830 154710 117880 137010 100070 178990 97485 101120 103300 103910 105370 125060 118390 158820 145900 162000 139040 130300 144960 156420 120310 142140 103790 176530 98617 97516 98044 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185870000 14990 1723 14197 28568;28569 22917 22917 1 9606 Homo sapiens 0.0892948848368178 KVIQWCTHHK Unmodified 1335.687 0.68700948 2881 E5RJR5;E5RI56;P63208;E7ERH2;F8W8N3;P63208-2;E5RGM3 SKP1 S-phase kinase-associated protein 1 yes no 0 0 1 5 0 1 38.222 38.314 5 0.00064836 8840 20230619_1885_Aki_TMTPro18x_K_F5 95.573 72.656 50239 40984 51409 41194 44219 60961 53012 50360 61463 47069 44984 41453 54422 43382 39407 49637 58314 40858 46463 37532 51972 41885 46836 59885 53202 52078 61450 47623 47304 42428 54539 45023 41426 49267 55491 38964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27376000 14991 2881 14198 28570 22918 22918 1 9606 Homo sapiens 0.03259345913738798 KVLIQTK Unmodified 828.54329 0.54328858 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3;Q5CAQ4;I3L0K7;I3L239 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 1 4 0 1 43.316 43.36 3 0.086246 10986 20230619_1883_Aki_TMTPro18x_K_F4 42.287 2.6411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14992 1211 14199 28571 22919 22919 1 9606 Homo sapiens 0.12215867145130233 KVLPLLK Unmodified 809.57386 0.57386043 3613 P49792;A0A8V8TLA0;A0A8V8TL79;A6NKT7;J3KNE0;Q7Z3J3;A0A8Q3SIN4;B4DYH0;F8VYC4;A0A286YES2;Q99666;O14715;P0DJD1;P0DJD0;A0A8Q3SII4;A0A8Q3SII5;J3KQ37;V9HWE4;D3DX73;B4DTT2;B4DZH4;F8W705;Q99666-2 RANBP2;RGPD3;RGPD4;RGPD1;RGPD5;RGPD8;RGPD2;HEL161;hCG_1994636 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 1 yes no 0 0 1 6 0 1 52.282 52.359 3 0.020853 14922 20230619_1886_Aki_TMTPro18x_K_F6 69.998 26.875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14993 3613 14200 28572 22920 22920 1 9606 Homo sapiens 0.16145645530184538 KVNPYEEVDQEK Unmodified 1476.7096 0.70963822 4413 Q9BQP7;Q5QPE7;Q5QPE8 MGME1 Mitochondrial genome maintenance exonuclease 1 yes no 0 0 1 4.5 0.5 1 1 44.903 44.964 3 0.0019589 11726 20230619_1883_Aki_TMTPro18x_K_F4 80.905 63.827 38298 33330 40450 33124 40246 45791 41416 42696 49813 59988 62664 59633 65870 55045 56341 62327 68056 64911 35443 30513 40865 33673 41867 45289 41977 44267 50833 59677 63797 60399 66668 57330 58135 62647 64981 61636 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37992000 14994 4413 14201 28573;28574 22921 22921 1 9606 Homo sapiens -0.009648209982970002 KVNQTVAALK Unmodified 1070.6448 0.64479354 869 Q5TBB1;A0A2R8YCP1;Q8N451;A0A2R8Y6Y1;A0A2R8YGP2;A0A2R8YCJ4;A0A087WZJ6;A0A2R8Y761;A0A2R8YCX2;A0A2R8Y883;A0A2R8Y7R8;Q5TBB1-2;A0A2R8YE60;A0A2R8Y687;A0A2R8Y6M7;A0A2R8Y7Q3;A0A2R8Y4S2;A0A087WXR7;A0A2R8YEC1;A0A2R8Y459;A0A2R8Y6Q6;A0A2R8YEU9;A0A2R8YEH2 RNASEH2B Ribonuclease H2 subunit B yes no 0 0 1 4 0 1 45.596 45.64 3 0.029801 11997 20230619_1883_Aki_TMTPro18x_K_F4 55.04 21.952 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14995 869 14202 28575 22922 22922 1 9606 Homo sapiens 0.11229693777022476 KVPAESMPTLTPAFPR Unmodified 1740.9233 0.92327659 1947 A4FUT8;Q7LBC6;Q7LBC6-2 JMJD1B;KDM3B Lysine-specific demethylase 3B yes no 0 0 1 3 0 1 54.29 54.336 3 0.028563 16093 20230619_1882_Aki_TMTPro18x_K_F3 49.537 34.15 48143 43978 53451 49806 50133 53992 57214 53248 65130 56524 60821 61489 62089 52013 60074 63730 58684 54348 44590 40300 53784 49903 52504 54280 57524 54552 65703 57116 62673 61885 63224 54567 61065 63330 56132 51735 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18224000 14996 1947 14203 28576 22923 22923 1 9606 Homo sapiens 0.082451881768975 KVPGEGLPLPK Unmodified 1133.6808 0.6808447 3503 Q6FI51;Q6FHS4;P25685;A0A7I2V3K7;P25685-2;B4DKK9;A0A7I2YQW1 DNAJB1 DnaJ homolog subfamily B member 1 yes no 0 0 1 2 0 2 49.818 49.877 3;4 0.00035824 14343 20230619_1881_Aki_TMTPro18x_K_F2 101.89 67.134 238290 209860 266450 290940 278040 331350 284740 266350 298710 314150 336550 313810 337580 243310 377080 271870 285090 226360 220660 192720 268680 287530 288150 330400 287210 277970 305140 314910 343550 316130 345910 254930 377060 270620 273260 215700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199320000 14997 3503 14204 28577;28578 22924;22925 22924 2 9606 Homo sapiens 0.11935150953877383 KVPGVTAIELDEDTGTFR Unmodified 1946.9949 0.99492121 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;P51114-3;B4DM21;B4DM78;B4DGH9;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 1 5 0.816 1 1 1 55.798 55.848 3 9.3033E-06 16586 20230619_1883_Aki_TMTPro18x_K_F4 96.505 84.482 140960 119280 139090 152270 138380 169380 149800 147990 160220 183250 168150 162640 174310 153390 178800 179290 165660 167460 130360 109460 141530 151260 144220 169450 150740 153610 163120 182660 172430 165710 177930 159890 181010 179110 158640 159170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1434300000 14998 1029 14205 28579;28580;28581 22926;22927 22926 2 9606 Homo sapiens 0.059303543444229945 KVPGVTAIELGEETCTFR Unmodified 2006.0143 0.014276441 1885 A0A994J7P9;P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 yes no 0 0 1 7 0 1 56.454 56.513 3 1.3256E-14 16378 20230619_1887_Aki_TMTPro18x_K_F7 167.99 150.41 87383 79636 89967 103440 70579 81070 95810 87988 81137 138070 120830 117250 138990 109440 113450 133220 119830 126230 80878 73074 90973 102200 75479 83844 94742 90798 85336 136100 122870 119670 139980 114460 116270 133050 114630 119940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 447220000 14999 1885 14206 28582 22928 22928 1 9606 Homo sapiens 0.05150987363685999 KVPHNINFR Unmodified 1123.6251 0.62506115 2834 D3DWL9;Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes no 0 0 1 5 0 1 37.432 37.524 4 8.2595E-05 8510 20230619_1885_Aki_TMTPro18x_K_F5 122.52 82.413 48362 36038 42938 46514 45931 55825 49605 48402 62076 46561 50068 38058 44637 38884 39224 52108 56841 44983 44652 33091 44142 46224 47644 55554 50178 49909 61998 46942 51605 39119 45506 40777 41020 51714 54132 42844 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35459000 15000 2834 14207 28583 22929 22929 1 9606 Homo sapiens 0.06819362556939268 KVPLLHNFHSFLYQPDWR Unmodified 2296.1905 0.19054174 3562 Q6IAX1;P37268-5;P37268;E9PNM1;B4DND3;A0A1W2PQ47;B7Z9R8;P37268-3;P37268-2;E9PJG4;E9PS69 FDFT1 Squalene synthase yes no 0 0 1 7 0 1 57.383 57.439 5 5.4769E-14 16784 20230619_1887_Aki_TMTPro18x_K_F7 158.64 150.04 38304 35294 39297 36178 18546 31668 26184 26884 46964 34000 22976 26116 40415 29620 30013 44123 37246 32370 35454 32313 39507 36432 21243 32252 26618 27999 45704 33789 25475 27000 40190 31218 31176 43406 35533 30888 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116650000 15001 3562 14208 28584 22930 22930 1 9606 Homo sapiens 0.0942940937984531 KVPQVSTPTLVEVSR Unmodified 1638.9305 0.93047046 2776 CON__P02769;B4DPR2;P02768;B4DPP6;H0YA55;CON__P02768-1;F6KPG5;A0A0C4DGB6;A8K9P0;B2RBS8;Q56G89;P02768-2;C9JKR2;D6RHD5;B7WNR0;P02768-3;A0A087WWT3 ALB Serum albumin yes no 0 0 1 2.5 0.5 1 1 49.414 49.483 3 1.8166E-14 14200 20230619_1881_Aki_TMTPro18x_K_F2 174.4 148.7 + 370280 779220 988640 420420 2362300 2562600 1500500 1337200 1811200 800170 770230 821030 566750 595640 869620 571310 749340 934580 350480 709230 970370 483070 2320300 2401200 1570500 1434300 1784200 841220 831320 824530 600510 620700 870740 595740 719410 883140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5462800000 15002 2776 14209 28585;28586 22931 22931 1 9606 Homo sapiens 0.13656244048979715 KVPTVSRPYSFIEFDTFIQK Unmodified 2401.2682 0.26818294 3304 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 0 2 5 0 1 61.44 61.488 4 1.613E-07 18541 20230619_1885_Aki_TMTPro18x_K_F5 102.98 80.042 104090 86540 96293 98901 59742 87655 97165 78879 111880 96958 74465 99955 86200 82704 115190 95542 87923 112630 96197 79335 97960 98745 66153 89270 96224 81777 111640 97157 78936 100620 89041 86548 115010 96823 84559 106700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 359760000 15003 3304 14210 28587 22932 22932 1 9606 Homo sapiens 0.12359957734679483 KVPVSVNLLSK Unmodified 1182.7336 0.73360855 3325 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3C4 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 1 5.5 0.5 1 1 53.4 53.474 3 0.00014143 15266 20230619_1885_Aki_TMTPro18x_K_F5 117.93 93.912 445070 343780 396600 472900 386830 504340 459900 457130 494890 446080 424290 372560 490470 384150 407320 533170 467040 450100 411030 315840 407330 467150 405250 506200 460560 470020 499380 449360 441170 382430 494390 403880 419640 528360 446160 428450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 358130000 15004 3325 14211 28588;28589 22933 22933 1 9606 Homo sapiens 0.14955109016705137 KVPWFDQQNGR Unmodified 1373.684 0.6840326 4293;1866 Q92522;A0A994J4R3 H1FX Histone H1x no no 0 0 1 3 0 1 47.833 47.912 3 0.00040059 13165 20230619_1882_Aki_TMTPro18x_K_F3 98.754 81.429 273960 228150 266130 265390 231270 287050 276800 296510 289980 268390 275870 259430 319040 254110 291730 277580 265150 264230 253290 209190 270500 265350 244440 288780 277010 301450 294100 272490 285530 263700 322770 263620 295580 277920 253940 251120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 261200000 15005 4293;1866 14212 28590 22934 22934 1 9606 Homo sapiens 0.01213794060595319 KVQDGLSDIAEK Unmodified 1301.6827 0.68269519 1951 P46100;P46100-4;P46100-3;P46100-5;P46100-2;A4LAA3;P46100-6;A0A096LNL9;A0A096LNW1;B7Z1D8 ATRX Transcriptional regulator ATRX yes no 0 0 1 5.5 0.5 1 1 48.392 48.471 3 0.00019953 13251 20230619_1886_Aki_TMTPro18x_K_F6 101.61 55.729 51584 38068 50095 54593 57892 59946 56423 58124 68582 60802 68998 63178 61019 53600 62071 67300 66654 74734 47658 34997 51150 53827 59465 60164 57361 59574 69166 61391 70387 63741 62594 56337 63386 67807 63785 70875 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73999000 15006 1951 14213 28591;28592 22935;22936 22936 2 9606 Homo sapiens 0.0439211518121283 KVQGGALEDSQLVAGVAFK Unmodified 1916.0367 0.036726442 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9 CCT7 T-complex protein 1 subunit eta yes no 0 0 1 1 0 1 57.458 57.458 3 0.021608 17513 20230619_1880_Aki_TMTPro18x_K_F1 48.112 35.946 88353 80366 86904 95121 79221 88844 88356 80470 90808 116540 114690 103710 101220 108470 111700 119040 108710 125190 81744 73676 88331 94772 83142 90153 88673 83796 93428 115450 115910 106050 104370 112220 113280 119780 104150 118780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61222000 15007 4005 14214 28593 22937 22937 1 9606 Homo sapiens 0.11534954823605403 KVQSLQDEVAFLR Unmodified 1531.8358 0.83584179 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 1 1 0 1 55.7 55.7 3 8.7501E-11 16673 20230619_1880_Aki_TMTPro18x_K_F1 173.59 158.9 284130 240820 256490 237420 138670 163300 113580 118720 128510 273570 389790 405780 280320 305810 416540 286820 341820 364010 262580 220480 260810 239280 152910 169980 117040 128790 140730 271920 383160 402290 296270 317420 416340 293320 327920 344840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 302880000 15008 1958 14215 28594 22938 22938 1 9606 Homo sapiens 0.09119730297652495 KVQYAPERPGPQPTAETTR Unmodified 2125.0916 0.091615559 2004 P49407;P49407-2;A8K103;E9PM35 ARRB1 Beta-arrestin-1 yes no 0 0 2 4.5 3.5 1 1 36.49 36.483 4 6.0691000000000005E-25 8073 20230619_1888_Aki_TMTPro18x_K_F8 213.45 189.97 228800 247330 278880 215600 189630 204530 266990 234730 244380 304050 317400 259160 298390 207770 374060 221770 236210 224950 212370 226040 277410 220630 205800 208630 264180 239630 253300 302010 321210 263360 308170 217030 370580 223350 227260 213670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 191260000 15009 2004 14216 28595;28596 22939;22940;22941 22941 3 9606 Homo sapiens 0.07407341624275432 KVSAQEVR Unmodified 915.51378 0.51377937 3456 P15311;Q6NUR7;B2R6J2;V9HW42;J7M2B1 EZR;HEL-S-105;EZR-ROS1 Ezrin;Tyrosine-protein kinase receptor yes no 0 0 1 7.5 0.5 1 1 32.458 32.505 3 0.056305 6324 20230619_1887_Aki_TMTPro18x_K_F7 58.37 20.812 83390 35528 117930 126660 231600 211710 135230 184680 142220 37544 69660 50721 37698 39488 97996 18518 75429 34158 77142 33327 118610 121300 228540 206850 142230 186400 141320 46368 73484 50665 42426 39973 96881 20094 72102 32429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59709000 15010 3456 14217 28597;28598 22942 22942 1 9606 Homo sapiens 0.05264303129001746 KVSPESNEDISTTVVYR Unmodified 1922.9585 0.9585357 3339 O94925-3;B3KM58;Q68D38;B8ZZC5;B8ZZA8 GLS;DKFZp686O15119 Glutaminase kidney isoform, mitochondrial yes no 0 0 1 5.5 0.5 1 1 45.39 45.472 3 1.7094E-38 11807 20230619_1885_Aki_TMTPro18x_K_F5 258.8 231.16 138560 126960 138160 152210 150560 149520 160620 150930 147860 188040 168670 165870 187270 136670 167310 201120 177230 167790 128210 116410 140640 151620 155470 151510 161000 155120 152440 187260 172890 168430 189430 145430 171210 199110 169410 159760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 182270000 15011 3339 14218 28599;28600 22943;22944 22943 2 9606 Homo sapiens 0.03397477447742858 KVSQQILEK Unmodified 1071.6288 0.62880913 4531 Q9H845;Q9H9W4;H0Y8Z9;Q9BUX5 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 1 2 0 1 44.459 44.541 3 0.087775 11937 20230619_1881_Aki_TMTPro18x_K_F2 37.749 10.86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15012 4531 14219 28601 22945 22945 1 9606 Homo sapiens 0.09585987540140195 KVTEELLTDNR Unmodified 1316.6936 0.69359423 4661 Q9UHB9;B4DVI7;Q9UHB9-2;B3KMI9 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 1 4.5 0.5 1 1 45.851 45.911 3 0.00047539 12018 20230619_1885_Aki_TMTPro18x_K_F5 96.591 76.21 149620 117940 136650 156970 154880 177900 172210 170930 193780 192880 206140 211470 211650 183890 194110 210520 207620 200130 138220 108300 140310 155550 159990 178100 173300 175690 196700 194320 211200 212890 215030 191950 198520 210530 198470 190220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 513080000 15013 4661 14220 28602;28603 22946 22946 1 9606 Homo sapiens 0.047915175554635425 KVTGEVTDPSGK Unmodified 1216.6299 0.62993134 3486 P22059;B4DR25 OSBP Oxysterol-binding protein 1;Oxysterol-binding protein yes no 0 0 1 6 0 1 40.734 40.826 3 0.00012313 9868 20230619_1886_Aki_TMTPro18x_K_F6 102.5 80.031 40938 24264 50870 51782 66695 61794 62779 55858 55158 45880 67368 59855 54891 46455 76395 27636 60736 56027 37865 22457 51085 50112 67763 61568 63289 57238 57049 47334 68001 59656 57405 47405 76164 29829 58231 52931 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37759000 15014 3486 14221 28604 22947 22947 1 9606 Homo sapiens 0.030281571183650158 KVTGTLDANR Unmodified 1073.5829 0.58292157 1426 A0A384MEG1;Q16658;B3KTA3;B3KTM9;C9JFC0;A0A0A0MSB2 FSCN1 Fascin yes no 0 0 1 8 0 1 36.779 36.765 3 0.00012417 8150 20230619_1888_Aki_TMTPro18x_K_F8 128.67 98.599 295180 239950 327010 247970 456270 459680 366020 352340 470650 94993 115200 65262 73391 56719 242020 48153 77750 34401 273170 219790 330940 252740 461020 446410 377230 360350 458210 109710 133090 67642 84220 58370 232980 48410 75678 32979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 338910000 15015 1426 14222 28605 22948 22948 1 9606 Homo sapiens 0.04907342357887501 KVTHAVVTVPAYFNDAQR Unmodified 2015.0589 0.058858868 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 1 3.5 0.5 2 2 47.395 47.456 3;4 6.422899999999999E-19 12886 20230619_1883_Aki_TMTPro18x_K_F4 185.85 168.77 367880 272800 340800 380170 351950 424740 433730 433610 485640 490490 511510 550450 580110 455630 422940 618610 577300 592290 339770 250710 348960 375600 367240 426120 434180 443860 492930 494410 526680 552960 582290 481830 442450 616940 550970 562790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1742999999.9999998 15016 3429 14223 28606;28607;28608;28609 22949;22950;22951 22951 3 9606 Homo sapiens 0.09193179292105924 KVTLGDTLTR Unmodified 1102.6346 0.63462279 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3;Q69YJ6;G3V3B0;Q9UKV3-3;Q9UKV3-2 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 1 2 0 1 44.035 44.118 3 0.042758 11736 20230619_1881_Aki_TMTPro18x_K_F2 51.359 35.469 536210 427080 479960 514200 582130 655440 607320 599120 687500 537150 607310 547950 604390 515640 603770 563420 622050 533620 495310 391780 494040 513990 597540 650720 613240 614220 692150 546870 626450 555020 616940 535440 614710 563990 594380 507470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 375350000 15017 2896 14224 28610 22952 22952 1 9606 Homo sapiens 0.08741086051782077 KVTQLDLDGPK Unmodified 1212.6714 0.67140222 3851 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 1 7 0.816 1 1 1 47.885 47.96 3 8.3542E-05 12623 20230619_1888_Aki_TMTPro18x_K_F8 124.47 90.827 197600 148130 165730 175700 202750 220970 223680 213640 224520 224310 233990 227460 243520 204920 229340 251930 251280 220590 182380 135900 171650 175800 208240 219860 224300 219020 229110 226210 240040 230090 247560 214570 234780 250620 240000 209970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1186800000 15018 3851 14225 28611;28612;28613 22953 22953 1 9606 Homo sapiens 0.07357337877715509 KVVDHYENPR Unmodified 1255.6309 0.63093439 2381 F5H5N2;B4DNC9;B4DDI1;B3KQ30;Q9H1K1 ISCU Iron-sulfur cluster assembly enzyme ISCU, mitochondrial yes no 0 0 1 5.5 0.5 1 1 33.036 33.098 4 1.2673E-05 6911 20230619_1886_Aki_TMTPro18x_K_F6 134.3 98.64 60210 54247 59017 54652 74865 78341 74873 71861 83439 92085 95872 101900 95562 83233 90561 91329 99241 80285 55701 49661 60265 55513 76478 77313 75753 74377 85068 92261 97811 102310 97313 86861 92651 91053 94738 76441 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69925000 15019 2381 14226 28614;28615 22954 22954 1 9606 Homo sapiens 0.013344162779276303 KVVGCSCVVVK Unmodified 1233.6573 0.65734884 3501 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 1 4 0 1 43.918 43.962 3 8.2078E-05 11258 20230619_1883_Aki_TMTPro18x_K_F4 124.86 68.762 95535 151760 175500 192950 291090 211860 249380 138690 152720 78057 156320 86496 51434 53177 566090 39707 49235 33408 89470 139020 173390 191610 290690 211430 250590 145570 160820 82572 156230 86533 79801 55169 535150 41485 51994 31856 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69469000 15020 3501 14227 28616 22955 22955 1 9606 Homo sapiens 0.04986645853432492 KVVNPLFEK Unmodified 1072.6281 0.62808085 3722 P62424;Q5T8U3 RPL7A 60S ribosomal protein L7a yes no 0 0 1 3 0 1 50.798 50.869 3 2.491E-05 14512 20230619_1882_Aki_TMTPro18x_K_F3 117.67 81.088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15021 3722 14228 28617 22956 22956 1 9606 Homo sapiens 0.09467192891065679 KVVQLDVR Unmodified 955.58147 0.581465 1627 O95831;O95831-3;A0A6Q8PFM5;A0A6Q8PG15;A0A6Q8PFE1;A0A7I2PK44;A0A6Q8PHJ9;A0A6Q8PHC0;A0A6Q8PFA7;A0A6Q8PFS4;A0A6Q8PFQ8;A0A7I2RLJ8;A0A6Q8PFW2;O95831-4;Q5RZA0;Q5RZ99 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 1 2 0 1 42.56 42.639 3 0.083327 11036 20230619_1881_Aki_TMTPro18x_K_F2 45.137 28.111 215700 194340 218680 205310 268440 234780 255720 237450 273270 157110 174360 149090 148880 124360 221460 125920 168360 112560 199600 177980 222500 206980 274030 235470 259020 240300 273100 163030 182440 150970 156180 129180 220440 126120 161210 107250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59743000 15022 1627 14229 28618 22957 22957 1 9606 Homo sapiens 0.10189753059785289 KVVVSPTKK Unmodified 984.63317 0.63316622 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;A0A7I2V2S8 NCL Nucleolin yes no 0 0 2 5.5 0.5 1 1 39.207 39.296 4 0.030143 9258 20230619_1886_Aki_TMTPro18x_K_F6 65.5 38.902 93696 55241 148690 129410 272680 246680 210200 217060 158730 67670 121290 98395 67508 51819 203560 33917 78560 54307 86908 51213 148190 126000 270990 239780 213940 219670 162810 77393 124010 97039 76909 54066 196750 36079 76206 51454 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165160000 15023 1658 14230 28619;28620 22958 22958 1 9606 Homo sapiens 0.14023496753691234 KVVVVVPNEEDWK Unmodified 1539.8297 0.82969378 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 1 7 0 1 55.165 55.226 3 0.0067162 15862 20230619_1887_Aki_TMTPro18x_K_F7 69.714 53.489 42068 52733 47858 49302 43625 51851 67605 46923 45765 70448 63261 50586 63584 43198 88288 45540 36372 54148 39073 48200 48106 50144 46228 52164 66063 48956 48655 69285 64091 51976 65901 45019 86248 46348 35425 51273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111480000 15024 3957 14231 28621 22959 22959 1 9606 Homo sapiens 0.08137212066117172 KVVVYLQK Unmodified 975.6117 0.6117025 1649 P53634;A0A7I2V2Q8;A0A7I2V466;B4DJQ8;A0A7I2V6E3;H0YCY8;A0A7I2V5C5;A0A7I2V5L5;I3V9T0;A0A7I2V5J2;A0A7I2V2V5;A0A7I2V3A2;A0A7I2V4Z3;A0A7I2V2F3;P53634-3;P53634-2;A0A7I2V3M6 CTSC Dipeptidyl peptidase 1;Dipeptidyl peptidase 1 exclusion domain chain;Dipeptidyl peptidase 1 heavy chain;Dipeptidyl peptidase 1 light chain yes no 0 0 1 5 0 1 49.168 49.244 3 0.0003914 13425 20230619_1885_Aki_TMTPro18x_K_F5 117.04 65.309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15025 1649 14232 28622 22960 22960 1 9606 Homo sapiens 0.12292111724980259 KVWLDPNETNEIANANSR Unmodified 2070.013 0.013030887 1679 J3QR09;J3KTE4;Q53G49;A0A7I2YQG2;P84098;Q8IWR8;A0A7I2V638;A0A7I2V4U6;A0A7I2V2L0;A0A7I2V512 RPL19 Ribosomal protein L19;60S ribosomal protein L19 yes no 0 0 1 6 0 1 51.809 51.886 3 1.0003E-18 14727 20230619_1886_Aki_TMTPro18x_K_F6 181.14 163.63 116980 117080 144510 116140 127740 133610 148610 130580 109730 143150 108220 69863 99491 68358 108850 57033 61724 49257 108530 107140 144080 117750 134310 133810 147470 133930 114140 141690 110540 74146 102070 70109 107630 57258 59427 46912 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132040000 15026 1679 14233 28623 22961 22961 1 9606 Homo sapiens 0.02082489319218439 KVYENYPTYDLTER Unmodified 1789.8523 0.85227972 3032 H0Y993;P35659;B4DFG0;A0A494C028;P35659-2;B4DNW3;A0A494C198;Q6MZJ9 DEK;DKFZp686A24118 Protein DEK yes no 0 0 1 5.5 0.5 1 1 48.654 48.732 3 0.00014692 13219 20230619_1885_Aki_TMTPro18x_K_F5 95.822 89.841 384220 345690 396670 407570 388850 417470 424880 395520 372270 485300 519250 460850 469620 373970 484730 440220 408210 340110 355600 316910 401850 406740 405130 421030 424900 408100 388500 484610 523390 466040 481180 392090 488160 435980 390840 324350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 370380000 15027 3032 14234 28624;28625 22962;22963 22962 2 9606 Homo sapiens -0.011052333269162773 KWDLSELPK Unmodified 1114.6023 0.60226003 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 1 1 0 1 54.726 54.726 3 0.0022125 16291 20230619_1880_Aki_TMTPro18x_K_F1 91.03 54.505 271930 221070 213140 232220 169550 227360 235750 258030 317580 302670 296740 339590 391920 366590 275320 422230 409480 430660 250990 202530 220920 233690 181950 230980 236460 262630 318120 304720 309760 344050 391830 380050 290230 423440 390640 408870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 916150000 15028 1328 14235 28626 22964 22964 1 9606 Homo sapiens 0.04954298648794975 KWDLTQK Unmodified 917.49707 0.49706667 4170;3047 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;H0YHT2;Q68D13;H0YI78 KIF21A;DKFZp779C159 Kinesin-like protein KIF21A no no 0 0 1 2.5 0.5 1 1 47.111 47.188 3 0.060195 13142 20230619_1881_Aki_TMTPro18x_K_F2 59.35 32.252 315360 233650 297420 293300 305300 371450 278850 257860 315690 247790 286930 253570 275000 225540 282800 234610 297660 249140 291300 214490 303700 292250 316160 366990 283920 271130 318180 251400 295050 256300 281370 234120 287960 236630 284320 236660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142220000 15029 4170;3047 14236 28627;28628 22965 22965 1 9606 Homo sapiens 0.035018022430335805 KWENPTQNNAGLEDFER Unmodified 2046.9395 0.93953159 2295 P22694-4;B4E2L0;P22694-2;P22694-9;P22694-6;P22694-7;P22694-5;P22694;P22694-3;B2RB89;P22694-10;B1APG1;B1APF7;B1APF9;B1APF8;B1APG2;B1APG3;P22694-8;B1APG0 PRKACB cAMP-dependent protein kinase catalytic subunit beta yes no 0 0 1 5 0 1 50.606 50.682 3 3.5397E-14 14034 20230619_1885_Aki_TMTPro18x_K_F5 167.18 153.15 77035 65037 67882 78936 58945 78927 82873 85931 87405 94609 93755 96783 101890 88849 103960 103580 100380 113370 71177 59653 69677 78581 62697 79940 82330 87528 89074 95189 96301 97882 103830 92702 105480 104400 96169 107530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81725000 15030 2295 14237 28629 22966 22966 1 9606 Homo sapiens -0.04206059123293926 KWHEEVEIYR Unmodified 1387.6884 0.68844927 2781 CON__P15497 yes yes 0 0 1 5 0.816 1 1 1 42.639 42.712 4 0.0047815 10682 20230619_1886_Aki_TMTPro18x_K_F6 73.435 58.273 + 107860 79459 111170 91736 115640 131020 122140 129430 173340 118480 136430 126890 152680 128170 130660 140370 156290 171960 99696 72885 112620 92224 120050 129460 124350 131970 172030 120720 142330 128570 154300 132880 134720 142600 149390 162940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285540000 15031 2781 14238 28630;28631;28632 22967 22967 1 0.010112584835269445 KWQDEDGKK Unmodified 1132.5513 0.55128709 3567 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;B5MCW2;H7C422;H7C3M2 RPL3;rpl3 60S ribosomal protein L3 yes no 0 0 2 7 0 1 39.102 39.166 3 0.01078 8911 20230619_1887_Aki_TMTPro18x_K_F7 73.885 52.932 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15032 3567 14239 28633 22968 22968 1 9606 Homo sapiens -0.009686503960438131 KWQSVEPLTGWK Unmodified 1457.7667 0.76669959 4498 Q9H1E5;E9PIN7 TMX4 Thioredoxin-related transmembrane protein 4 yes no 0 0 1 4 0 1 57.189 57.195 3 0.039841 17178 20230619_1883_Aki_TMTPro18x_K_F4 49.12 34.559 36297 25876 33485 39864 32426 39106 37437 35158 48127 35293 36237 40345 42195 38225 33200 46447 47481 44130 33514 23813 34276 39070 33949 39487 37776 36219 47915 35851 38018 40665 42488 39916 34777 46375 45268 41951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25336000 15033 4498 14240 28634 22969 22969 1 9606 Homo sapiens 0.056126910687453346 KWQTMIEAHVDVK Unmodified 1583.813 0.81299786 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;B7Z3M5;D6RB09;E9PFI5;H0Y8L7;D6RAS7;D6RED7 RPS3A 40S ribosomal protein S3a yes no 0 0 1 2 0 1 53.311 53.344 4 2.3614E-06 15879 20230619_1881_Aki_TMTPro18x_K_F2 139.21 91.069 105890 86379 88905 95776 64439 73613 91282 80095 102890 116540 91441 101230 119650 94865 80956 136660 112300 129250 97780 79171 91397 95706 69660 76315 90841 82418 103830 115350 95621 103230 119380 100320 85048 136050 107260 122780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158970000 15034 3694 14241 28635 22970 22970 1 9606 Homo sapiens 0.044443879084838045 KWQTMIEAHVDVK Oxidation (M) 1599.8079 0.80791248 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;B7Z3M5;D6RB09;E9PFI5;H0Y8L7;D6RAS7;D6RED7 RPS3A 40S ribosomal protein S3a yes no 0 1 1 8 0 1 47.725 47.783 4 9.4275E-05 12592 20230619_1888_Aki_TMTPro18x_K_F8 112.72 92.06 69600 48902 48798 59755 51003 58397 60910 54231 66024 61063 63733 61952 70420 52530 56780 74349 63826 72449 64142 44890 51403 59426 53140 59062 60979 55911 66873 61386 65769 62568 70964 55684 58469 74198 61060 68801 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140820000 15035 3694 14241 28636 22971 22971 2382 1 9606 Homo sapiens 0.032000840458749735 KWSEALVLYDR Unmodified 1378.7245 0.72450043 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;Q96K98;Q96K97;Q9UHB9-3 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 1 1.5 0.5 1 1 56.318 56.328 3 0.0022651 17142 20230619_1881_Aki_TMTPro18x_K_F2 81.565 65.675 238600 186650 209920 223550 186290 225330 234290 227790 263040 254640 237160 256140 256320 251390 254810 313400 278340 291020 220350 171230 215390 222800 196900 227760 234340 233300 265360 256000 245570 259840 261210 262570 260760 312520 266170 276610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88335000 15036 4661 14242 28637;28638 22972;22973 22973 2 9606 Homo sapiens 0.05028715660364469 KWTELDTNQHR Unmodified 1426.6953 0.69532556 2054 A8K4U4;Q5VSL9-2;Q5VSL9;Q5VSL9-4 STRIP1 Striatin-interacting protein 1 yes no 0 0 1 7 0 1 39.63 39.695 4 3.6186E-07 9124 20230619_1887_Aki_TMTPro18x_K_F7 139.76 122.82 44372 31353 44308 46851 49073 52002 50847 44871 57637 52273 62515 54934 55557 50921 51937 57965 62257 60405 40994 28843 45100 46085 50629 52022 51370 46556 58496 52539 63551 55547 56782 53019 53480 58259 59455 57354 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80501000 15037 2054 14243 28639 22974 22974 1 9606 Homo sapiens -0.0009542863592741924 KWVPAGGSTGFSR Unmodified 1348.6888 0.68878362 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A075B6E5 ENAH Protein enabled homolog yes no 0 0 1 5.5 0.5 1 1 45.634 45.715 3 2.4686E-06 11997 20230619_1886_Aki_TMTPro18x_K_F6 116.71 94.93 493390 425420 416820 480470 461660 563090 496960 527690 548560 644630 560080 536460 669600 576650 487370 742900 700770 657820 455790 389900 430920 481820 477580 562290 500740 544410 557180 641870 578560 551160 671540 602280 511970 738330 668130 625860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363840000 15038 918 14244 28640;28641 22975 22975 1 9606 Homo sapiens 0.028386782033749114 KWYTIFK Unmodified 984.54329 0.54328858 436 B2R4N3;A0A024R7B0;Q9BZL1 UBL5 Ubiquitin-like protein 5 yes no 0 0 1 7 0 1 57.761 57.813 3 0.021274 16928 20230619_1887_Aki_TMTPro18x_K_F7 79.474 56.045 101700 104410 93405 90643 91685 151410 96399 100100 195460 55060 50622 56009 55749 48384 59360 59768 63096 57556 94126 95436 95587 93522 96134 147240 99871 104570 187270 58452 58994 56587 57000 50756 60502 59759 60296 54710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11518000 15039 436 14245 28642 22976 22976 1 9606 Homo sapiens 0.050398671451375776 KYAEAVTR Unmodified 936.50288 0.50288033 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DHB3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 1 4.5 3.04 1 1 1 1 35.715 35.744 3 0.047532 8250 20230619_1880_Aki_TMTPro18x_K_F1 60.064 36.828 574840 298710 557300 634290 723860 791730 648330 670520 696520 632080 855700 849680 714910 631020 639220 358850 787760 607700 530200 276640 570530 614230 736650 785230 659800 692400 712710 647500 864120 844440 730580 643830 657840 380070 751050 575220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2166300000 15040 3374 14246 28643;28644;28645;28646 22977;22978 22977 2 9606 Homo sapiens 0.032089007547028814 KYAMEQSIK Oxidation (M) 1112.5536 0.55359527 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8;A0A0J9YVR6;A0A0J9YWM1;E9PN18;E9PMU7;A0A0J9YXC6;A0A994J6K6 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 1 1 8 0 1 39.574 39.563 3 0.01929 9278 20230619_1888_Aki_TMTPro18x_K_F8 96.342 63.709 117110 81672 98236 111500 137000 134540 138210 132320 139240 89423 104940 75157 82000 65276 105340 71765 79365 51470 108040 75061 102020 110420 139150 134250 139250 134180 140240 92312 108130 76730 85474 68003 105070 71012 75994 49204 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61475000 15041 1044 14247 28647 22979 22979 608 1 9606 Homo sapiens 0.0018206201739303651 KYAWQGVALLPFVDER Unmodified 1890.9992 0.99921872 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 0 1 3.5 0.5 1 1 62.826 62.844 3 0.024629 19603 20230619_1882_Aki_TMTPro18x_K_F3 52.814 36.676 43860 33862 39296 48473 37220 57139 41543 47273 51597 53237 46103 46231 53200 42940 50138 46221 39456 39215 40507 31124 40339 47828 39098 56836 41967 49116 51814 53277 47876 47115 53892 44583 50426 46029 37853 37321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23439000 15042 2350 14248 28648;28649 22980 22980 1 9606 Homo sapiens 0.08935908348666999 KYDAFLASESLIK Unmodified 1483.7922 0.79224564 3732 P62906;Q1JQ76;A0A024RCW3 RPL10A 60S ribosomal protein L10a;Ribosomal protein yes no 0 0 1 3.67 3.09 1 1 1 60.226 60.242 3 8.9353E-07 18749 20230619_1881_Aki_TMTPro18x_K_F2 142.97 93.347 353160 277330 332020 366340 272580 383680 325440 362820 367150 452450 381500 426880 454760 362140 379590 496930 434250 461250 326310 254660 338420 362810 290010 385940 326630 374400 372840 451480 394230 432180 458110 382910 390990 494840 415150 438380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2142099999.9999998 15043 3732 14249 28650;28651;28652 22981;22982 22981 2 9606 Homo sapiens 0.0697012080049717 KYDEAIK Unmodified 865.45453 0.45453316 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TPI7;Q58F05;Q9BXJ9-4;A0A8V8TQT7;A4FU51;Q6N069;Q6N069-2;Q6N069-5;Q6N069-4;Q6N069-3 NAA15;NARG1;NARG1L;NAA16 N-alpha-acetyltransferase 15, NatA auxiliary subunit;N-alpha-acetyltransferase 16, NatA auxiliary subunit yes no 0 0 1 6 0.816 1 1 1 41.122 41.206 3 0.019736 10053 20230619_1886_Aki_TMTPro18x_K_F6 81.594 18.108 253090 139000 271930 308730 296150 360940 284260 316700 312710 285660 389200 403700 375660 331940 322250 236510 432560 398130 233690 128780 275280 298120 305620 359580 288410 325770 319800 293960 395160 401790 381400 339850 334190 248590 412570 376560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252430000 15044 2297 14250 28653;28654;28655 22983;22984 22984 2 9606 Homo sapiens 0.016424071147980612 KYDEVLHMVR Unmodified 1288.6598 0.65979168 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IU89 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 1 4.5 3.5 1 1 47.761 47.79 4 0.0001016 13461 20230619_1880_Aki_TMTPro18x_K_F1 134.75 118.5 225980 173890 212570 227310 192700 219950 239990 240910 254210 247010 218840 200340 229490 195340 222530 265070 247540 236020 208780 159670 216870 225090 203060 223410 239710 244820 256830 247880 226580 205460 233600 205360 228020 263490 236520 224520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 268470000 15045 3647 14251 28656;28657 22985;22986 22985 2 9606 Homo sapiens 0.02700817582694981 KYEAAYGK Unmodified 928.46543 0.46543219 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5;V9GZL3 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 1 8 0 1 40.386 40.378 3 0.0028201 9637 20230619_1888_Aki_TMTPro18x_K_F8 98.249 69.162 242190 122810 376760 375360 563900 630140 465160 577870 455150 278640 542350 590880 415310 387710 550760 175860 583340 504080 224440 114610 374400 361100 567830 615910 474780 585540 466730 307130 547410 578400 434520 395520 557290 199780 557270 475590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193900000 15046 2908 14252 28658 22987 22987 1 9606 Homo sapiens -0.0016619051091311121 KYEAIITVVKPSTR Unmodified 1603.9297 0.92974218 4668 Q9UJA5;Q9UJA5-2;Q9UJA5-3 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes no 0 0 2 6 0 1 51.483 51.56 4 0.026606 14583 20230619_1886_Aki_TMTPro18x_K_F6 46.249 37.849 209700 134290 180180 154110 158970 218050 185600 166380 225450 206940 211290 209710 257250 173220 195590 227270 225440 222000 193420 123250 185060 154900 167990 214370 186830 174630 226860 207150 219380 211540 257860 182960 201790 227120 215380 210930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151020000 15047 4668 14253 28659 22988 22988 1 9606 Homo sapiens 0.15193449399907877 KYEDEINKR Unmodified 1193.6041 0.60405094 2787 CON__P35908v2;CON__P35908;P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 0 0 2 6 0 1 37.592 37.668 4 0.0054571 8595 20230619_1886_Aki_TMTPro18x_K_F6 83.397 57.278 + 16688 24228 64919 0 1857200 73185 39615 74843 134910 17753 49348 55321 43451 604990 62444 16234 44023 38454 15874 21969 85384 0 1723200 74137 148090 74600 130990 23170 54482 72972 49303 572200 61883 27676 42261 36309 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160350000 15048 2787 14254 28660 22989 22989 1 9606 Homo sapiens 0.014993076667451533 KYEDICPSTHNMDVPNIK Oxidation (M) 2175.9929 0.99288907 3110 I3L397;I3L504;P63241;P63241-2;Q6IS14;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 0 1 1 7.5 0.5 1 1 45.834 45.897 4 0.00032252 11673 20230619_1887_Aki_TMTPro18x_K_F7 82.707 66.764 88504 75250 100920 105510 100510 101380 102330 96497 80480 122620 110260 129360 122350 87583 99733 117410 122550 144980 81952 69125 101490 103990 104300 102730 102470 99664 84650 122600 112390 129480 123300 93423 103180 118970 117190 137330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221370000 15049 3110 14255 28661;28662 22990 22990 1805 1 9606 Homo sapiens -0.0480676572728953 KYEEIDNAPEER Unmodified 1491.6842 0.68415175 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 1 2.5 1.12 1 1 1 1 39.824 39.866 3 1.5398E-05 9698 20230619_1881_Aki_TMTPro18x_K_F2 131.66 125.28 773070 637320 783890 935560 955150 1021400 1053400 1048000 1185700 1125000 1224900 1288600 1314400 1148700 1119800 1450700 1411000 1358600 714950 585820 799020 920970 980900 1026700 1060400 1070900 1201900 1137900 1259200 1296400 1330000 1205000 1160000 1446800 1346800 1291500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2057399999.9999998 15050 1417 14256 28663;28664;28665;28666 22991;22992;22993 22992 3 9606 Homo sapiens -0.04202295520735788 KYEEVAR Unmodified 893.46068 0.46068117 1095;1096;3746;3083;2862;3405 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;A0A494C0P6;Q6LDX7;P09493-3;D9YZV5;P09493-4;Q15657;P09493-10;A0A0K0K1I0;P09493-8;Q8TCG4;P09493-9;H0YKX5;P09493;D9YZV4;Q6ZN40;A0A0S2Z4G6;P09493-6;H0YL42;H7BYY1;B7Z596;F5H7S3;Q1ZYL5;P09493-2;B7Z722;D9YZV7;P09493-5;A0A494BZZ2;H0YKJ4;H0YK48;Q59GR8;A0A024R5W6;P09493-7;A0A994J554;A0A494C0V8;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;P06753-7;Q8NAH0;Q5VU62;P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72;U3KQK2;Q5TCU3;P07951;V9HW25;CON__Q3SX28;A7XZE4;P07951-2;B4DGC2;P07951-3;B4E3P1 TPM3;DKFZp686J1372;TPM3-ROS1;TPM1;HEL-S-82p;TPM4;HEL-S-108;TPM2;HEL-S-273;TPM2b Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor;Tropomyosin alpha-1 chain;Tropomyosin alpha-4 chain;Tropomyosin beta chain no no 0 0 1 5 0.816 1 1 1 34.641 34.702 3 0.018713 7404 20230619_1883_Aki_TMTPro18x_K_F4 83.005 13.624 + 564810 225390 758860 814120 1332100 1446400 1016800 1299200 1040700 666810 1152500 1257900 910360 924260 1103600 312510 1129700 982600 522080 211610 763760 780590 1329000 1409500 1044800 1319300 1061600 725930 1167700 1237700 946790 931920 1115700 364260 1079600 926720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1741499999.9999998 15051 1095;2862;3083;1096;3746;3405 14257 28667;28668;28669 22994;22995 22994 2 9606 Homo sapiens 0.009689253463307068 KYEFGESDLR Unmodified 1242.5881 0.58806652 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 4.5 0.5 1 1 44.823 44.884 3 9.9779E-05 11670 20230619_1883_Aki_TMTPro18x_K_F4 132.5 108.16 829700 728000 828950 914110 818240 903300 934250 936520 1009600 1139800 1166800 1162400 1192600 997100 1110200 1308300 1252700 1304900 767540 667870 842530 907740 853810 915070 937890 959960 1031100 1141300 1190900 1173600 1212400 1050600 1139400 1308900 1197500 1239200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 648590000 15052 3881 14258 28670;28671 22996;22997 22996 2 9606 Homo sapiens -0.02352398570155856 KYELGRPAANTK Unmodified 1346.7306 0.73064844 3707 Q5JR94;P62241;Q5JR95 RPS8 40S ribosomal protein S8 yes no 0 0 2 3 0 1 37.872 37.925 3 0.010424 8730 20230619_1882_Aki_TMTPro18x_K_F3 61.038 31.691 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15053 3707 14259 28672 22998 22998 1 9606 Homo sapiens 0.07115233891886419 KYEMFAQTLQQSR Oxidation (M) 1644.793 0.7929907 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;Q96IF9;Q0IIN5;Q9NTC4;A0A7P0TA22 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 1 1 2.5 0.5 1 1 48.871 48.942 3 0.0011819 13649 20230619_1882_Aki_TMTPro18x_K_F3 108.58 89.368 238520 215510 231670 260310 371880 393600 331380 338690 392740 150270 155140 112360 106670 89486 212440 136090 126180 80384 220640 197620 238210 260890 374040 386600 338090 344620 386410 161280 168170 115340 115470 95470 208980 133170 121240 77108 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 493360000 15054 3656 14260 28673;28674 22999 22999 2360 1 9606 Homo sapiens -0.0036140782208349265 KYEMFAQTLQQSR Unmodified 1628.7981 0.79807608 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;Q96IF9;Q0IIN5;Q9NTC4;A0A7P0TA22 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 1 3.5 0.5 1 1 52.377 52.418 3 2.3544E-08 15079 20230619_1883_Aki_TMTPro18x_K_F4 164.93 143.7 985390 862970 953090 953660 1066200 1497100 1238900 1167000 1477300 573660 503980 359240 412550 333090 836640 520650 500400 287390 911320 790730 973180 962820 1106000 1464100 1245400 1198900 1449700 607070 558860 374650 444220 354270 822920 508240 480550 276220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 864050000 15055 3656 14260 28675;28676 23000;23001 23001 2 9606 Homo sapiens 0.008828960405480757 KYEPPVPTR Unmodified 1085.5869 0.58694431 3706 Q53XL8;Q53HB3;P62191 PSMC1 26S protease regulatory subunit 4 yes no 0 0 1 1 0 1 39.579 39.579 3 0.0069143 9866 20230619_1880_Aki_TMTPro18x_K_F1 72.006 55.065 234360 165700 221090 253660 245210 272500 270060 247650 307650 286090 291700 306530 345380 260790 250690 344180 334680 281720 216420 152490 226280 249030 253520 273450 271940 255850 310690 287770 302390 308740 346150 274960 261710 340780 319040 268440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 283340000 15056 3706 14261 28677 23002 23002 1 9606 Homo sapiens 0.04757431851612637 KYEQGFITDPVVLSPK Unmodified 1819.972 0.97200092 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;B7Z1G4;Q6QE17 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 0 1 3.67 3.09 1 1 1 57.68 57.702 3;4 5.8584E-08 17557 20230619_1880_Aki_TMTPro18x_K_F1 126.88 104.44 178030 159750 162090 182320 134630 167830 160090 151540 178260 215650 203690 222440 238460 198570 190610 244580 236040 262690 164590 146410 165700 182100 142900 170460 160580 157750 181810 214670 209400 224630 240000 208110 197480 245880 225580 249210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 357310000 15057 1454 14262 28678;28679;28680 23003;23004;23005 23003 3 9606 Homo sapiens 0.09481380017632546 KYGETANECGEAFFFYGK Unmodified 2116.92 0.9200417 3605 P49321;Q53H03;P49321-3;Q6PJY7;P49321-2;Q5T626;E9PPR5;O95138;E9PI86;E9PPQ8 NASP Nuclear autoantigenic sperm protein yes no 0 0 1 7.2 0.748 1 2 2 58.436 58.489 3;4 1.7276E-09 17158 20230619_1888_Aki_TMTPro18x_K_F8 130.85 119.71 234360 168180 194770 204040 143780 196400 168970 165920 206480 255980 206750 252750 263540 249580 203520 311890 268470 280980 216240 154360 200430 203020 154530 198440 170190 174090 208610 253770 214860 256490 264570 260690 212200 310370 256330 267160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2551800000 15058 3605 14263 28681;28682;28683;28684;28685 23006;23007 23007 2 9606 Homo sapiens -0.09374151458405322 KYHIGDEVK Unmodified 1087.5662 0.56620887 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 1 6.5 0.5 1 1 39.614 39.69 4 0.0010835 9148 20230619_1887_Aki_TMTPro18x_K_F7 103.22 37.165 164600 92417 143740 173960 213580 185490 177180 176720 196530 188020 216830 186530 183820 144580 182800 178140 190010 145310 151740 85384 148910 168950 215010 186490 181360 181460 199930 189350 219860 188090 188500 152300 186260 176690 181420 138530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 243180000 15059 1532 14264 28686;28687 23008 23008 1 9606 Homo sapiens 0.025928414719373905 KYHNVGLSK Unmodified 1044.5716 0.5716286 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;B4E0W4 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 1 4 0 1 37.388 37.432 3 0.0053135 8522 20230619_1883_Aki_TMTPro18x_K_F4 73.885 45.253 74798 42371 76379 81912 93602 86590 81774 88322 103250 88398 94488 84596 87109 73497 89332 73524 88300 66069 69043 39161 77721 79471 95441 87222 83824 90093 103590 89240 96974 85675 89234 76176 90645 73544 84341 62913 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109630000 15060 759 14265 28688 23009 23009 1 9606 Homo sapiens 0.05112565054423612 KYHPDTNKDDPK Unmodified 1456.6947 0.69465686 2347 B3KM81;Q59E88;Q53G26;Q96EY1-2;Q96EY1;I3L1T6 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes no 0 0 2 7 0 1 35.086 35.157 5 1.0725E-06 7382 20230619_1887_Aki_TMTPro18x_K_F7 150.21 128.34 45274 14553 57472 64649 73880 73443 67371 64564 68836 65427 92690 86553 70509 64376 72897 28763 74262 54560 41798 13778 57651 61160 75155 73307 68371 66623 70937 66713 92967 86065 72777 65256 73902 31095 70904 51620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48551000 15061 2347 14266 28689 23010 23010 1 9606 Homo sapiens -0.015422680756500995 KYIPGTK Unmodified 805.46979 0.46978929 2752 C9JFR7;G4XXL9;P99999;CON__P62894 CYCS Cytochrome c yes no 0 0 1 4 0 1 41.687 41.73 3 0.023083 10290 20230619_1883_Aki_TMTPro18x_K_F4 67.494 44.451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15062 2752 14267 28690 23011 23011 1 9606 Homo sapiens 0.05927318702663342 KYIQAEPPTNK Unmodified 1287.6823 0.68230126 645 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;Q658P9;F8VZW6 SMARCC2;DKFZp313D0632 SWI/SNF complex subunit SMARCC2 yes no 0 0 1 1 0 1 42.567 42.567 3 0.024084 11255 20230619_1880_Aki_TMTPro18x_K_F1 44.922 30.569 35952 23586 31118 34650 34180 37833 35944 37748 48499 42721 47930 50705 49342 39503 42246 40526 54174 48205 33166 21701 32080 34112 35343 38001 36530 38700 48655 43158 49273 50705 49970 41190 43727 41150 51676 45726 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32168000 15063 645 14268 28691 23012 23012 1 9606 Homo sapiens 0.049967402519769166 KYMEENDQLK Unmodified 1296.602 0.60200203 3626 Q53HT6;Q53G72;P51572;P51572-2;A0A2R8Y5M6;C9JMD7;C9JSP1;C9JQ75;C9J0M4 BCAP31 B-cell receptor-associated protein 31 yes no 0 0 1 5 0 1 43.721 43.802 3 0.00020487 11132 20230619_1885_Aki_TMTPro18x_K_F5 119.74 77.534 54960 45228 61776 59425 52584 61559 66657 65708 80873 75732 81930 92168 96489 76615 73946 97337 103870 103030 50874 41522 62044 58888 55748 62168 66845 67119 81615 76502 84693 92290 96939 80661 77367 97725 99087 97797 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38976000 15064 3626 14269 28692 23013 23013 1 9606 Homo sapiens -0.03443489133383082 KYMEENDQLKK Oxidation (M) 1440.6919 0.69187967 3626 Q53HT6;Q53G72;P51572;P51572-2;A0A2R8Y5M6;C9JMD7;C9JSP1;C9JQ75;C9J0M4 BCAP31 B-cell receptor-associated protein 31 yes no 0 1 2 6.5 0.5 1 1 39.541 39.618 4 0.080588 9089 20230619_1887_Aki_TMTPro18x_K_F7 42.629 30.269 55190 52637 63327 72712 78424 85625 76927 83778 79320 77399 92158 81432 78957 61684 94634 57367 67184 45950 51148 48325 63941 71923 80181 85541 77755 85518 81164 78662 93338 81806 81657 64050 94225 57231 64400 43843 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118260000 15065 3626 14270 28693;28694 23014 23014 2316 1 9606 Homo sapiens -0.010838595248287675 KYNPTWHCIVGR Unmodified 1529.7562 0.75615168 3739;4348 Q6FGH9;P63167;Q96FJ2 DNCL1;DYNLL1;DYNLL2 Dynein light chain 1, cytoplasmic;Dynein light chain 2, cytoplasmic no no 0 0 1 7 0.816 1 1 1 43.432 43.493 4 1.3354E-09 10999 20230619_1886_Aki_TMTPro18x_K_F6 174.73 162.88 958210 921030 926940 989250 912880 941800 1074300 960360 1171500 1059100 846250 814110 832490 718600 820030 1195300 1157300 860840 886750 843450 944370 993290 953140 957040 1076500 982860 1175200 1057800 882920 834880 850290 769250 854690 1173600 1102000 822260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1697799999.9999998 15066 3739;4348 14271 28695;28696;28697 23015 23015 1 9606 Homo sapiens 0.012463851426446126 KYNRFEK Unmodified 983.51886 0.51886475 3713 P62280;M0QZC5;M0R1H5 RPS11 40S ribosomal protein S11 yes no 0 0 2 3 0 1 36.717 36.772 4 0.01862 8248 20230619_1882_Aki_TMTPro18x_K_F3 91.9 56.605 524880 431350 538110 508980 694100 594690 600650 884160 292410 505660 502470 353920 451940 344900 499290 393760 448810 278840 485460 395570 547460 509340 703880 601790 602700 871830 324870 525410 502810 366600 464620 358810 503440 388940 428720 266680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 517790000 15067 3713 14272 28698 23016 23016 1 9606 Homo sapiens 0.026446069916119086 KYPDRVPVLVEK Unmodified 1441.8293 0.82929985 2217 B2R5J1 yes yes 0 0 2 2 0 1 46.548 46.627 4 0.00034326 12908 20230619_1881_Aki_TMTPro18x_K_F2 98.592 0 162560 145410 161230 196770 167420 192400 163650 172930 203210 246070 227270 255600 247030 234930 223760 251600 228080 236810 150390 133490 164190 194340 173440 194410 166540 179990 206030 245010 233090 258160 250530 243750 228340 251710 218240 225050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157640000 15068 2217 14273 28699 23017 23017 1 9606 Homo sapiens 0.12605837136925402 KYPEAAACYGR Unmodified 1284.5921 0.59210605 4688 Q9UNE7;H3BS86 STUB1 E3 ubiquitin-protein ligase CHIP yes no 0 0 1 8 0 1 39.221 39.208 3 0.0020399 9162 20230619_1888_Aki_TMTPro18x_K_F8 81.09 68.944 76213 57384 71556 75962 94521 98788 86926 89414 108010 93840 101530 90523 100440 79476 95583 94794 104930 91851 70402 52704 73442 75469 96157 97947 88732 92078 108560 94536 104360 91716 102280 83186 97785 94862 100210 87320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63662000 15069 4688 14274 28700 23018 23018 1 9606 Homo sapiens -0.03880632348113977 KYPPPYK Unmodified 891.48544 0.48543935 3878 Q14157-1;Q14157-4;B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like yes no 0 0 1 3.5 0.5 1 1 41.299 41.349 3 0.081721 10144 20230619_1883_Aki_TMTPro18x_K_F4 50.898 18.427 100110 73569 92025 90724 111960 125210 109390 105630 128390 113270 146590 114240 128990 103860 112280 112930 118240 97520 92444 67526 94450 90664 114700 123540 111040 109450 130350 114150 148520 115700 131350 107960 114800 112500 112930 92864 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171780000 15070 3878 14275 28701;28702 23019 23019 1 9606 Homo sapiens 0.03535605219701665 KYPYWPHQPIENL Unmodified 1683.8409 0.84092717 3323 O75947;O75947-2 ATP5H ATP synthase subunit d, mitochondrial yes no 0 0 1 2 0 1 55.036 55.057 3 0.00033613 16558 20230619_1881_Aki_TMTPro18x_K_F2 94.781 76.643 43126 35671 38803 45669 40680 48848 45743 49247 53949 57378 52910 55033 68655 57771 57455 73872 64338 73887 39847 32739 39853 45333 42293 49150 46091 50487 54504 57484 55037 56094 69041 60365 59095 73923 61558 70144 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 342860000 15071 3323 14276 28703 23020 23020 1 9606 Homo sapiens 0.026360341602639892 KYQEDFNPLVR Unmodified 1407.7147 0.71466402 4535 Q9H974-2;Q9H974-3;Q9H974;Q9H974-4 QTRTD1 Queuine tRNA-ribosyltransferase subunit QTRTD1 yes no 0 0 1 7.5 0.5 1 1 48.709 48.786 3 9.9426E-05 12994 20230619_1888_Aki_TMTPro18x_K_F8 121.04 76.477 290840 235320 269200 272680 222850 300240 257270 265650 241760 356920 343010 317800 361550 305340 337460 404650 366410 398280 268750 215780 274620 272730 236480 300650 257200 276170 251730 354440 347850 324130 367230 320700 345560 404460 350520 378240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148030000 15072 4535 14277 28704;28705 23021 23021 1 9606 Homo sapiens 0.02711527654969359 KYQEGPDAER Unmodified 1191.552 0.55201537 933 A0A0A0MRC4;Q86YR5;A0A0A0MSK4;Q86YR5-4 GPSM1 G-protein-signaling modulator 1 yes no 0 0 1 3 0 1 32.893 32.964 3 0.0082734 6742 20230619_1882_Aki_TMTPro18x_K_F3 70.412 54.158 35139 22959 53911 44179 45731 48784 50858 50084 34843 44102 65865 46652 49115 38592 74275 15955 34992 29524 32595 21202 53021 42925 48170 48977 50551 50919 37621 44928 65312 46975 51753 38914 72589 17364 33822 27918 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26460000 15073 933 14278 28706 23022 23022 1 9606 Homo sapiens -0.03609855747004076 KYQQVDEEFLR Unmodified 1453.7201 0.72014333 3121;2158 I6MBV4;A8KAM8;P09619 PDGFRB Receptor protein-tyrosine kinase;Platelet-derived growth factor receptor beta no no 0 0 1 5 0 1 48.432 48.509 3 0.00061525 13121 20230619_1885_Aki_TMTPro18x_K_F5 95.417 82.65 84869 83714 100080 86182 95417 91668 115250 100610 91232 117480 81772 60621 95815 54463 94417 112720 68707 69305 78693 76629 100250 87005 99769 92571 114310 102610 94132 116020 84865 64003 97063 59578 94723 109840 65991 66284 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29128000 15074 3121;2158 14279 28707 23023 23023 1 9606 Homo sapiens 0.01143206446795375 KYSSVSEPAK Unmodified 1094.5608 0.56078914 4702 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 1 8 0 1 38.986 38.973 3 0.00024488 9060 20230619_1888_Aki_TMTPro18x_K_F8 117.86 60.512 102820 50629 117700 134670 195200 249090 142900 188480 170120 77881 115500 109150 85255 79718 131230 50366 130640 81354 94949 47106 119640 130330 195490 241470 148020 193570 169280 85746 119800 108420 90235 81637 132120 53107 124660 77123 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23145000 15075 4702 14280 28708 23024;23025 23024 2 9606 Homo sapiens 0.017291178894765835 KYTEQITNEK Unmodified 1252.6299 0.62993134 428 A0A024R745;H7BYD0;Q16718;F8WAS3;C9IZN5;A0A7I2V2W4;A0A087X1G1;A0A7I2V3L8;Q16718-2 NDUFA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes no 0 0 1 7 0 1 41.701 41.772 3 0.013135 9984 20230619_1887_Aki_TMTPro18x_K_F7 75.819 45.381 16984 29353 34693 25084 55206 35033 47173 26699 21023 20279 29230 12753 17749 10104 61994 9554.4 10922 7877.6 15949 26794 33998 25854 55172 34579 47184 27733 23224 20611 29097 13247 20483 10509 59152 9688.5 10923 7511.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15983000 15076 428 14281 28709 23026 23026 1 9606 Homo sapiens 0.013721571183623382 KYTMGDAPDYDR Oxidation (M) 1446.6085 0.60854397 1487 P28161;A0A384P5E9;P28161-2;F6XZQ7;Q0D2I8;E9PHN6;A8HT81;E9PHN7;E9PLF1;A0A0A0MR85;X5DNN9;Q03013-3;Q03013;P09488-2;Q03013-2;X5DR03;A0A140VKE3;P09488;E7EWW9;X5D932;H3BQT3;B9ZVX7 GSTM2;GSTM4;GSTM1 Glutathione S-transferase Mu 2;Glutathione S-transferase Mu 4;Glutathione S-transferase Mu 1 yes no 0 1 1 4 0.816 1 1 1 37.43 37.493 3 0.0080036 8510 20230619_1883_Aki_TMTPro18x_K_F4 94.402 83.19 110240 82418 93560 98946 124000 122810 127600 122180 127950 116670 154170 156860 133910 131520 145120 132890 161270 147470 101750 75623 96916 98898 126380 122400 128440 124730 131280 119430 156120 156560 137970 136480 148190 134400 154050 139960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 242350000 15077 1487 14282 28710;28711;28712 23027 23027 991 1 9606 Homo sapiens -0.0968959597266803 KYVATLGVEVHPLVFHTNR Unmodified 2179.1902 0.19020739 2668 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6;Q96QB7;Q0EFC9 RAN;TC4 GTP-binding nuclear protein Ran yes no 0 0 1 5.5 0.5 1 1 82.825 82.89 5 1.1734E-24 25307 20230619_1885_Aki_TMTPro18x_K_F5 197.72 187.39 5473.3 5078.2 4309 4716.7 3318.9 3635 4151.7 3579.7 4408.5 5044.1 7245.4 4753.2 5333.4 4295.7 4800.2 3908 3418 3306.6 5056.3 4645.5 4460.9 4783.1 3550.8 3761.8 4148.8 3704.3 4585.4 5009.7 7197.7 4828.9 5471.8 4426.1 4809.6 3904.6 3282.9 3147.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4454100 15078 2668 14283 28713;28714 23028 23028 1 9606 Homo sapiens 0.1477798965997863 KYVHADAPTNK Unmodified 1242.6357 0.63568542 4016 Q58EY4;Q92922;Q05CR1;Q05BW5;F8WE13 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 1 8 0 1 35.749 35.738 4 0.0002163 7779 20230619_1888_Aki_TMTPro18x_K_F8 114.93 88.889 95492 56318 89003 95084 104050 125840 92736 113860 139470 116720 147880 147130 140000 121030 108890 93793 257200 132570 88095 51937 91216 93174 106780 124540 95672 117150 139660 118780 150900 147020 141850 124290 119300 96940 243790 125960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55030000 15079 4016 14284 28715 23029;23030 23029 2 9606 Homo sapiens 0.02407300420691172 KYVIYIER Unmodified 1082.6124 0.61243078 3695 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;J3KS10 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 1 2.5 0.5 1 1 48.298 48.373 3 0.077933 13431 20230619_1882_Aki_TMTPro18x_K_F3 46.334 28.935 955860 673780 755530 794080 689830 887480 904050 828610 1118800 978110 953040 984380 1068400 952650 809970 1269800 1200300 1066500 881560 618270 783610 793420 729300 888780 905440 854770 1120700 981240 990570 998440 1075400 999980 852220 1258200 1143700 1015600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 701980000 15080 3695 14285 28716;28717 23031 23031 1 9606 Homo sapiens 0.07442906374035374 KYVSQYYPK Unmodified 1174.6023 0.60226003 4054 Q5SSJ5;Q5SSJ5-2;B0QZK4;Q5SWC8;Q5SSJ5-3 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 1 4.5 0.5 1 1 45.393 45.454 3 0.0031298 11840 20230619_1885_Aki_TMTPro18x_K_F5 85.958 65.852 67674 62737 78883 72814 84930 91196 99559 89756 79501 51660 58933 44255 48175 40636 75942 40745 47784 37219 62714 57500 79270 72983 88003 90794 98889 90790 81199 54057 60947 45208 50802 42046 74982 40871 45919 35427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125560000 15081 4054 14286 28718;28719 23032 23032 1 9606 Homo sapiens 0.02194298648782933 LAAAFAVSR Unmodified 904.51305 0.51305109 3658 P55084-2;P55084;B4DY96;F5GZQ3;B4DDC9;D6W539;Q92799 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 4 0 1 51.591 51.619 2 0.0098741 14741 20230619_1883_Aki_TMTPro18x_K_F4 85.38 60.529 328760 317960 292940 266990 511750 724530 461870 462290 778200 112000 97057 99489 113490 92065 178300 129960 109680 103030 304070 290620 303980 279890 514910 691510 477480 480590 745600 133230 132450 101680 118660 97206 176110 128640 105560 98166 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202860000 15082 3658 14287 28720 23033 23033 1 9606 Homo sapiens 0.05697508479943281 LAADAGTFLSR Unmodified 1120.5877 0.58767259 828 A0A140VJU5;A0A994J549;A0A087WW40;Q9Y371;Q9Y371-2 SH3GLB1 Endophilin-B1 yes no 0 0 0 8 0 1 54.907 54.973 2 0.00026714 15728 20230619_1888_Aki_TMTPro18x_K_F8 123.42 99.897 95748 71798 81934 85963 74450 93570 94284 85451 106740 113200 108280 100480 113710 97662 106660 129930 136600 137370 88384 65876 84310 85758 78589 93841 94291 88618 108140 112550 111210 102540 115600 102570 110360 130380 130420 130390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59419000 15083 828 14288 28721 23034 23034 1 9606 Homo sapiens 0.03220226500661738 LAADDFR Unmodified 806.39227 0.39226725 1272;2775 P13645;CON__P13645;A0A1B0GVI3;CON__P02535-1;Q7Z3Y7;CON__Q7Z3Y7;CON__Q148H6;CON__Q9Z2K1;CON__Q3ZAW8;CON__P08779;CON__A2A4G1;P08779;CON__P02533;P02533;CON__Q04695;CON__Q9QWL7;Q04695 KRT10;KRT28;KRT16;KRT14;KRT17 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 0 0 0 2.5 0.5 1 1 44.357 44.435 2 0.012321 11593 20230619_1882_Aki_TMTPro18x_K_F3 115.46 0 + 585100 492030 616300 751050 6570100 885490 735070 785820 1190200 687840 912470 955810 808800 1920700 816240 754150 978410 1017500 541360 452450 703840 738340 6147800 900670 1092500 807120 1182600 711300 944990 990530 837770 1882300 838480 792580 934840 963520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 748490000 15084 1272;2775 14289 28722;28723 23035 23035 1 9606 Homo sapiens -0.018673192335313615 LAADLYNIK Unmodified 1019.5651 0.56514624 935 A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBF7 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 8 0 1 58.73 58.772 3 0.0012736 17304 20230619_1888_Aki_TMTPro18x_K_F8 95.099 34.509 34535 28965 31130 35132 25352 33454 28947 27506 35273 35362 34210 28645 29413 27579 32630 30966 31564 32383 31913 26568 31845 34945 26950 33813 29186 28737 35537 35125 34908 29354 30339 28663 33057 31151 30216 30739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69321000 15085 935 14290 28724 23036 23036 1 9606 Homo sapiens 0.05614627103034309 LAAEATEWQR Unmodified 1173.5778 0.57783619 2119 A8K8B2;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3;A0A024RCU9 SRPK1 SRSF protein kinase 1 yes no 0 0 0 4 0 1 48.481 48.519 2 0.0013588 13297 20230619_1883_Aki_TMTPro18x_K_F4 108.43 74.344 141780 117360 138820 152960 147100 170740 162510 147610 182650 200820 189980 174930 195750 170890 181630 192360 203600 207620 131080 107730 141490 151740 152630 170760 163570 153850 185360 199340 194730 178620 198970 177600 186210 193790 194620 197020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30445000 15086 2119 14291 28725 23037 23037 1 9606 Homo sapiens -0.0020096150471999863 LAAELEDR Unmodified 915.46616 0.46616048 4574 Q9NQG5;A2A2M0;A0A087X2D2 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes no 0 0 0 1 0 1 46.194 46.194 2 0.027344 12787 20230619_1880_Aki_TMTPro18x_K_F1 82.452 31.574 53679 46888 53564 57364 59170 64899 64265 59839 68875 70826 80669 81705 76903 67037 77725 73851 92698 81176 49656 43005 54533 57168 61144 64944 64646 61792 70376 71316 82067 81939 78667 69991 79819 74535 88468 77066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60814000 15087 4574 14292 28726 23038 23038 1 9606 Homo sapiens 0.005046041381433497 LAAELEDRR Unmodified 1071.5673 0.5672715 4574 Q9NQG5;A2A2M0;A0A087X2D2 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes no 0 0 1 3 0 1 40.537 40.593 3 3.5134E-06 9870 20230619_1882_Aki_TMTPro18x_K_F3 168.74 112.73 49776 39166 46831 49117 52547 52021 52427 54206 65183 59383 66112 63330 66424 60313 57496 65839 73404 73129 45993 35945 47908 48831 54103 52451 53272 55360 65705 59872 67771 64029 67399 62601 59545 66460 70076 69382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77293000 15088 4574 14293 28727 23039 23039 1 9606 Homo sapiens 0.034350558408505094 LAAFGQLHK Unmodified 983.55525 0.55525025 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;Q59GP7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 4 0 1 50.081 50.116 3 0.00012366 14016 20230619_1883_Aki_TMTPro18x_K_F4 135.83 82.359 1229300 1114900 1076000 1193100 1338500 1678900 1323200 1346400 1862400 393310 302970 194970 293120 259060 789890 331870 350880 198950 1136300 1021100 1110800 1204900 1372100 1652700 1350400 1372800 1800000 445790 384090 210350 323600 268920 767640 326430 338910 190930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2219100000 15089 3823 14294 28728 23040 23040 1 9606 Homo sapiens 0.06281483888324146 LAAFYGV Unmodified 739.39048 0.39047634 629;445 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;Q92973-3;S4R398;K7ESG1;B4DRY5;A0A024R7F7;O14787-2;Q4LE60;O14787 TNPO1;TNPO2;TNPO2 variant protein Transportin-1;Transportin-2 no no 0 0 0 3.67 3.09 1 1 1 63.97 63.98 2 0.051563 19510 20230619_1888_Aki_TMTPro18x_K_F8 85.518 82.39 188090 169590 170760 180110 174710 197380 173490 176430 183340 189990 179420 173600 182830 147760 198660 193420 202260 208150 173900 155320 175000 181320 181200 197870 175380 182060 186190 190770 184460 176130 187200 155780 201910 194460 193530 197530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 257180000 15090 629;445 14295 28729;28730;28731 23041;23042 23042 2 9606 Homo sapiens 0.010356717485251465 LAAHPLNNR Unmodified 1004.5516 0.55156186 360 A0A024R5V2;H0YLM8;Q8TDJ6-2;Q8TDJ6;Q8TDJ6-3 DMXL2 DmX-like protein 2 yes no 0 0 0 2 0 1 32.117 32.178 3 0.0059544 6564 20230619_1881_Aki_TMTPro18x_K_F2 81.548 70.675 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15091 360 14296 28732 23043 23043 1 9606 Homo sapiens 0.04946814114452991 LAAIIPDPVVAPSIVPVLK Unmodified 1911.1809 0.18087148 3829 Q12996;B4DMA4;E9PLP8;B4DFQ5 CSTF3 Cleavage stimulation factor subunit 3 yes no 0 0 0 3.5 0.5 1 1 65.733 65.756 3 0.0050595 20861 20230619_1882_Aki_TMTPro18x_K_F3 65.716 50.177 9783.1 6488.7 6410.4 8552.1 6412.6 11196 8225 8139 7725.3 11390 9579.4 10546 9281.9 7918.1 9669.9 9060.8 9099.3 10325 9009.7 5962.5 6810.7 8494.3 6748.6 11039 8174 8611.7 7990.1 11304 9737.7 10642 9498.8 8318.2 9791.8 9160.2 8720.1 9788.4 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32641000 15092 3829 14297 28733;28734 23044;23045 23044 2 9606 Homo sapiens 0.2617282832172805 LAAIVAK Unmodified 684.45341 0.45341094 1419 A0A7I2V5L3;Q9BSQ6;Q53H34;A0A384ME37;M0QYS1;P40429;A0A7I2V2L9;B4DNC8;M0QZU1;A0A096LPE0 RPL13A 60S ribosomal protein L13a yes no 0 0 0 3 0.816 2 2 2 52.525 52.564 2;3 0.018813 15585 20230619_1881_Aki_TMTPro18x_K_F2 114.67 50.104 224950 183350 219150 222860 252550 254860 266820 251520 284900 235210 237430 220730 269840 187610 254070 255940 267030 230700 207960 168200 223620 222280 259860 255280 268700 256770 287260 238210 247190 223760 273370 198410 259330 254700 255110 219520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1792799999.9999998 15093 1419 14298 28735;28736;28737;28738;28739;28740 23046;23047 23046 2 9606 Homo sapiens 0.0985623753655318 LAALADQWQFLVQK Unmodified 1629.8879 0.88787736 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4 0 1 65.416 65.428 3 1.523E-08 20579 20230619_1883_Aki_TMTPro18x_K_F4 146.36 122.17 22888 17856 21914 18681 20072 18662 23672 18475 21494 22258 22225 21810 27127 21625 25463 27562 27301 27955 21150 16361 22291 18818 21054 18890 23589 19006 22062 22281 22988 22167 27443 22637 26035 27617 26108 26545 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42027000 15094 1022;3868 14299 28741 23048 23048 1 9606 Homo sapiens 0.09812893711387005 LAALEEQR Unmodified 928.49779 0.49779495 2315 B5MCF9;B2RDF2;O00541;O00541-2;B3KXD6;B3KTZ6;H7C267 PES1 Pescadillo homolog yes no 0 0 0 2.5 0.5 1 1 45.246 45.324 2 0.00095404 12018 20230619_1882_Aki_TMTPro18x_K_F3 152.31 59.638 193160 157050 169080 191410 191500 220380 208950 196500 261270 213420 237520 244160 257660 202410 209320 257300 289530 249830 178420 144070 174260 190830 197820 220090 211210 202900 262110 215840 245680 245110 260020 213110 218370 257120 275970 237520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 325390000 15095 2315 14300 28742;28743 23049 23049 1 9606 Homo sapiens 0.03068596892092046 LAALESNK Unmodified 844.46543 0.46543219 2128 A8K8Z3;Q9UKI8-5;Q9UKI8;Q9UKI8-2;Q53TF9;B3KRP1;Q9UKI8-3;Q9UKI8-4;C9JWT6 TLK1 Serine/threonine-protein kinase tousled-like 1 yes no 0 0 0 7 0 1 48.606 48.693 3 0.037701 13004 20230619_1887_Aki_TMTPro18x_K_F7 53.166 27.227 125930 110530 116440 110470 125020 146860 136090 129550 215830 48569 49935 42333 65666 50112 61933 51329 160630 46381 116420 101190 119190 112130 129720 145360 138870 131390 208190 53617 59671 43636 66538 51528 68364 51331 151940 44524 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15243000 15096 2128 14301 28744 23050 23050 1 9606 Homo sapiens 0.03697809489096926 LAALNPESNTAGLDIFAK Unmodified 1843.968 0.96797818 1305 A0A1U9X8Y4;Q5SRT3;Q53FB0;O00299 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 yes no 0 0 0 5.33 3.09 1 1 1 63.444 63.463 3 1.0351E-18 19893 20230619_1880_Aki_TMTPro18x_K_F1 178.51 138.76 220110 175660 199130 248840 206020 275610 276730 281160 303600 295790 254850 256470 324340 248190 269130 347870 279570 325730 203330 161420 204550 245520 215760 276570 275670 287180 305970 296970 266820 262000 326030 261710 275670 346470 267710 309450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2592900000 15097 1305 14302 28745;28746;28747 23051;23052 23051 2 9606 Homo sapiens 0.0797529052392747 LAALPENPPAIDWAYYK Unmodified 1930.9829 0.98289996 3323 O75947;O75947-2;A0PJH2;F5H608 ATP5H ATP synthase subunit d, mitochondrial yes no 0 0 0 1 0 1 63.605 63.605 3 4.0287E-06 19953 20230619_1880_Aki_TMTPro18x_K_F1 98.507 85.104 24480 21482 25189 28335 23056 27682 30443 30415 31485 35390 36154 40326 43101 31517 37125 46211 37542 40515 22651 19718 25522 28042 24324 28096 30306 31020 32224 35632 37208 40420 43445 33587 37931 45855 35937 38531 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110400000 15098 3323 14303 28748 23053 23053 1 9606 Homo sapiens 0.054647823919594885 LAALPNVYEVISK Unmodified 1415.8024 0.8024164 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 2.5 0.5 1 1 63.455 63.475 3 5.4973E-07 19878 20230619_1882_Aki_TMTPro18x_K_F3 143.86 110.63 317640 241400 264110 324690 248920 305210 295710 306160 335940 378890 378760 358440 407030 325380 371660 386610 343290 382730 293170 221740 272910 320690 261430 310020 296800 314690 341890 378310 387700 363720 412590 340100 377080 387290 329010 363420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1002499999.9999999 15099 2188 14304 28749;28750 23054;23055 23055 2 9606 Homo sapiens 0.11114728525740247 LAALTAGDRVPWAR Unmodified 1495.8259 0.82594581 337 A0A024R5F4;P50416;B2RAQ8;P50416-2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 1 5 0 1 55.39 55.454 3 2.6078E-07 16029 20230619_1885_Aki_TMTPro18x_K_F5 141.99 114.9 120220 106270 117060 112700 155110 167560 167880 167880 186280 132620 123190 128410 143680 133440 120140 168020 159010 182740 111200 97339 119760 114080 158420 165300 169000 170450 186110 135900 130300 130830 145030 139310 125000 168940 151930 173330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93253000 15100 337 14305 28751 23056 23056 1 9606 Homo sapiens 0.09786587082908227 LAAPLLK Unmodified 724.48471 0.48471107 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 3 0 1 54.922 54.968 2 0.012912 16302 20230619_1882_Aki_TMTPro18x_K_F3 114.67 49.048 344490 289450 315800 350770 360360 419420 371830 365930 430080 388800 401280 417390 430650 359110 347840 499850 351670 453180 318370 265490 324100 350050 371390 417640 376020 378160 433680 392700 414390 420640 434590 379730 356280 496960 337140 430550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238290000 15101 3654 14306 28752 23057 23057 1 9606 Homo sapiens 0.11144810570658592 LAAQFIPK Unmodified 886.52764 0.52763852 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;Q9BZZ5-6;B4DDR3;Q9BZZ5-3;E9PQK6 API5 Apoptosis inhibitor 5 yes no 0 0 0 3 0 1 56.308 56.345 3 0.014145 16929 20230619_1882_Aki_TMTPro18x_K_F3 64.836 32.705 15718 14332 17929 18460 15203 18084 19816 14085 23658 16993 15975 12993 16488 12742 20419 18333 15217 15743 14562 13150 17995 18295 16138 18222 19815 14766 23557 16920 16765 13379 16988 13454 20396 18194 14613 14979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13584000 15102 4478 14307 28753 23058 23058 1 9606 Homo sapiens 0.07983580628092568 LAAQSCALSLVR Unmodified 1287.6969 0.69690547 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 3 0 1 53.15 53.209 3 0.00010621 15591 20230619_1882_Aki_TMTPro18x_K_F3 110.31 98.16 50823 42238 45867 47303 54034 57504 53992 53306 67786 50080 52839 57954 53059 44756 48548 58661 57244 53934 46961 38714 47135 47503 55494 57293 54855 54662 67632 51056 54957 58029 53946 47323 49982 58434 54664 51289 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130290000 15103 3811 14308 28754 23059 23059 1 9606 Homo sapiens 0.06456489128458998 LAASGEGGLQELSGHFENQK Unmodified 2070.997 0.99704647 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6RFI1 DBN1 Drebrin yes no 0 0 0 5.5 0.5 1 1 53.881 53.955 3 5.1725E-55 15574 20230619_1886_Aki_TMTPro18x_K_F6 279.15 265.32 187600 170660 193230 180500 172540 200030 168280 168110 153720 181080 198240 197400 189950 168260 178260 177390 197490 224520 173630 156300 195410 181840 180750 200130 169650 174340 159330 182750 200950 198630 193590 175050 182540 180760 188960 212660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 410320000 15104 1396 14309 28755;28756 23060;23061 23061 2 9606 Homo sapiens 0.004387830822906835 LAASIAPEIYGHEDVK Unmodified 1711.8781 0.87810054 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;P33993-3 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 5.5 0.5 1 1 54.897 54.969 3 2.8187E-11 15836 20230619_1885_Aki_TMTPro18x_K_F5 159.18 133.03 54405 32319 36251 49627 28370 46541 37459 37549 53635 63106 55180 71335 84771 69102 46305 98619 84358 95725 50082 29767 38309 48605 30539 47038 37751 39689 53869 62668 57895 71968 83774 72921 50155 98292 80424 90909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51865000 15105 1091 14310 28757;28758 23062 23062 1 9606 Homo sapiens 0.05063660915334367 LAASIAPEIYGHEDVKK Unmodified 1839.9731 0.97306355 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;P33993-3 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 1 7.5 0.5 1 1 51.973 52.048 4 4.6797E-09 14510 20230619_1887_Aki_TMTPro18x_K_F7 127.75 111.81 398600 352820 359080 417120 316540 436870 397650 361520 379280 428520 466350 404420 477630 333850 439890 482310 403820 338180 368460 323470 367870 416150 335000 438390 395780 376540 391040 428680 474500 409600 484680 354660 446210 474170 386270 322970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2467400000 15106 1091 14311 28759;28760 23063 23063 1 9606 Homo sapiens 0.0866759438652025 LAASVPYVK Unmodified 946.54877 0.54876789 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8 XPO7 Exportin-7 yes no 0 0 0 3 0 1 52.861 52.92 3 0.0013815 15465 20230619_1882_Aki_TMTPro18x_K_F3 81.548 60.646 34948 25874 30678 40017 36043 37534 40657 36245 44230 42154 49139 48159 51392 37705 37340 57692 51739 52404 32263 23809 31658 39186 37128 38106 40824 37304 45041 42468 50259 48300 51682 40309 39126 57291 49369 49827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22450000 15107 2083 14312 28761 23064 23064 1 9606 Homo sapiens 0.07335545936950894 LAAVDATVNQVLASR Unmodified 1526.8417 0.84165545 1478 A0A384NPU5;Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 0 2 0 1 62.969 62.978 3 6.8061E-34 19977 20230619_1881_Aki_TMTPro18x_K_F2 263.12 221.58 87906 56835 69001 89048 68172 92119 75303 76658 84810 86907 93302 86689 94081 80695 100200 117180 108140 98907 81033 52338 71788 87236 71263 92480 75835 79681 86214 87290 95345 87909 96302 85335 102310 116100 103320 94170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112330000 15108 1478 14313 28762 23065 23065 1 9606 Homo sapiens 0.09930828809319792 LAAVQLLQFLAPK Unmodified 1410.8599 0.8598717 130 A0A024R169;Q9NXF1-2;Q9NXF1;B7Z9D5;B4E149 TEX10 Testis-expressed sequence 10 protein yes no 0 0 0 7.5 0.5 1 1 66.318 66.339 3 5.989E-06 20478 20230619_1888_Aki_TMTPro18x_K_F8 99.215 79.603 22813 22303 21705 21198 27795 22944 31513 31047 31824 26975 28312 26500 28941 23418 34547 28130 29315 32142 21112 20403 22226 21552 28420 23288 31556 31040 32250 27461 29249 26833 29771 24523 34707 28437 28119 30476 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21707000 15109 130 14314 28763;28764 23066;23067 23067 2 9606 Homo sapiens 0.17087615521995758 LACDVDQVTR Unmodified 1175.5605 0.56047157 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4 0.816 1 1 1 44.643 44.709 2 3.5607E-05 11685 20230619_1882_Aki_TMTPro18x_K_F3 152.38 117.09 840870 654650 727290 835120 894750 1011700 933720 891180 1056300 1082100 1051000 1023600 1211600 950990 869110 1227400 1234300 1149900 776430 600940 751510 830610 917730 1006800 942770 923820 1069600 1081700 1085000 1039600 1215000 998340 911880 1223600 1176900 1093300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1186100000 15110 3758 14315 28765;28766;28767 23068;23069;23070 23068 3 9606 Homo sapiens -0.02028625102047954 LACGVIGIAQ Unmodified 1000.5376 0.53755128 3372 V9HWC9;P00441;H7BYH4;X5CN18;X5CHU1 HEL-S-44;SOD1 Superoxide dismutase [Cu-Zn] yes no 0 0 0 8 0 1 61.331 61.363 2 0.00040067 18345 20230619_1888_Aki_TMTPro18x_K_F8 124.89 104.33 730690 650960 642680 710070 677130 768190 582050 684100 978450 837010 1032800 1066400 969110 964700 831860 949230 1184100 1174000 675350 596360 660940 713150 699340 770710 605120 708700 975860 845210 1054100 1068600 985880 997210 868360 966450 1129500 1112800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2865500000 15111 3372 14316 28768 23071 23071 1 9606 Homo sapiens 0.03730400571157588 LACMEEFQK Unmodified 1154.51 0.5100159 3873 Q14008-2;Q14008;Q14008-3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 6 0 1 54.803 54.88 3 0.0037671 15989 20230619_1886_Aki_TMTPro18x_K_F6 68.224 53.08 45495 38904 38427 42914 39691 46543 43205 41740 59214 45162 44739 40210 47259 45618 45865 49014 46477 49480 42026 35650 39671 43064 41291 46687 43840 43072 58804 45361 46665 41254 48130 47043 46716 49222 44484 46981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19080000 15112 3873 14317 28769 23072 23072 1 9606 Homo sapiens -0.06105870751389375 LADALQELR Unmodified 1027.5662 0.56620887 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 4.5 1.12 1 1 1 1 58.523 58.562 2 0.00042536 17297 20230619_1885_Aki_TMTPro18x_K_F5 136.27 71.016 1055500 848940 874090 1194600 1370500 1699800 1522900 1672300 1720400 1419100 1327400 1511400 1469200 1132900 835570 2064100 888180 1634900 974540 780030 913080 1183800 1390400 1678700 1531900 1702400 1725500 1450600 1386900 1518500 1464100 1230000 871030 2031200 854470 1554700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1548099999.9999998 15113 1428 14318 28770;28771;28772;28773 23073;23074 23074 2 9606 Homo sapiens 0.05352841471926695 LADDLSTLQEK Unmodified 1231.6296 0.62959699 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q9UPG3;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 3.75 0.829 2 1 1 56.811 56.846 2;3 2.8258E-30 17152 20230619_1882_Aki_TMTPro18x_K_F3 305.82 226.35 164830 142030 144260 155350 171600 185550 183340 184880 196320 183290 194300 191670 215170 179060 193380 214160 207000 192370 152310 130130 148740 156240 176400 185370 184580 188840 199190 185600 200350 193850 217890 186950 197880 213400 197820 183000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1078800000 15114 349;3906 14319 28774;28775;28776;28777 23075;23076 23075 2 9606 Homo sapiens 0.023047373985036756 LADFGALHR Unmodified 998.52976 0.52976379 4455 Q9BW92;U3KQG0;Q9BW92-2;Q6ST48 TARS2 Threonine--tRNA ligase, mitochondrial yes no 0 0 0 8 0 1 46.831 46.879 3 1.9704E-09 12213 20230619_1888_Aki_TMTPro18x_K_F8 215.88 167.12 51509 39945 49346 49341 52881 61989 59660 59566 63140 51683 56823 56267 57231 47349 57433 58826 61824 60868 47597 36657 50370 49230 54857 61652 59867 60801 63836 52809 58626 56635 58406 49750 58647 59042 59104 57794 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43710000 15115 4455 14320 28778 23077 23077 1 9606 Homo sapiens 0.03044009365896727 LADFGLAR Unmodified 861.47085 0.47085192 56;3773;653;901;500;660;4632;672;610 Q6IAW3;A0A090N7W4;Q00535;Q00535-2;A0A0S2Z355;Q9BRL4;A0A024R980;B4DK03;A0A024R183;A0A140VK97;A0A024R996;B3KX76;Q59G02;Q96GA5;E5RGN0;B7Z8T0;E7EUK8;B4DK59;H0YAZ9;Q8IWB3;B4DHU6;B4DER5;Q96Q40-6;Q96Q40-3;Q96Q40-5;Q96Q40;O94921-2;Q07002;O94921;Q00536-3;Q07002-3;Q00536-2;Q00536;Q96Q40-4;Q9BWF9;O94921-3;A0A024QZP7;Q5H9N4;P06493;I6L9I5;E5RIU6;F5H6Z0;B4DGP5;A0A024RBH0;Q00537-2;Q00537;B5BU53;B2R9L6;A0A024R880;P50750;P50750-2;A0A2R8YEB7;A0A2R8Y644;Q9BVE2;A0A2R8YD28;A0A2R8YF61;A0A2R8Y7W5;A0A2R8Y4Z0;A0A024RA66;A0A024RA85;Q14004-2;Q14004;A0A024RB77;G3V5T9;P24941;A0A024RB10;P24941-2;E7ESI2;B4DDL9;A0A024R8R3;Q00526;K7EJ83;F8VYH9;F8VTV8;F8VWX7;A0A024RBB6;P11802;F8VXD2;F8VZZ0;F8VZ51;Q6LC83;P11802-2;Q00534;Q9NYV4-2;Q9NYV4;J3QSD7;Q9NYV4-3 CDK5;PCTK1;PCTK3;CDK16;CDK14;CDK15;CDK18;CDC2;DKFZp686L20222;CDK1;CDK17;PCTK2;CDK9;CDK13;CDC2L5;CDK2;CDK3;CDK4;CDK6;CDK12 Cyclin-dependent-like kinase 5;Cyclin-dependent kinase 15;Cyclin-dependent kinase 14;Cyclin-dependent kinase 18;Cyclin-dependent kinase 16;Cyclin-dependent kinase 1;Cyclin-dependent kinase 17;Cyclin-dependent kinase 9;Cyclin-dependent kinase 13;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3;Cyclin-dependent kinase 4;Cyclin-dependent kinase 6;Cyclin-dependent kinase 12 no no 0 0 0 5.33 3.09 1 1 1 54.341 54.386 2 0.002232 15419 20230619_1888_Aki_TMTPro18x_K_F8 130 0 1331000 1141400 1162100 1226300 1296900 1585900 1386200 1324500 1607100 851160 748970 614270 725690 596030 978910 816640 804500 611760 1229800 1045600 1197200 1236500 1340700 1570200 1398500 1358500 1588400 880080 807610 634740 753590 627110 980370 806260 770090 583930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 991760000 15116 901;56;672;500;610;653;660;3773;4632 14321 28779;28780;28781 23078;23079;23080 23080 3 9606 Homo sapiens 0.03457533071571106 LADFGSCLK Unmodified 1009.4903 0.49026674 405;938 H0YLY0;A0A024R6N2;Q9Y5S2;Q86XZ8;A0A0U1RRC3;Q59FU6;I6L989;X5DNJ6;X5D8Z6;E5KR06;E5KR05;B4DZE2;B4DM55;Q09013-10;E5KR07;Q09013-12;Q09013-1;Q09013-7;Q09013-11;Q09013-6;Q09013-16;Q09013;Q09013-8;Q09013-15;Q09013-5;Q09013-2;Q8IWQ7;B9EGA7;A0A0A0MRJ0;A0A0A0MRJ1;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-2;Q5VT25-6 CDC42BPB;DMPK;CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK beta;Myotonin-protein kinase;Serine/threonine-protein kinase MRCK alpha no no 0 0 0 8 0 1 56.715 56.772 2 0.0010761 16471 20230619_1888_Aki_TMTPro18x_K_F8 117.89 78.181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15117 405;938 14322 28782 23081 23081 1 9606 Homo sapiens -0.014098786998374635 LADFGVAGQLTDTQIK Unmodified 1675.8781 0.87810054 2575 Q9Y6E0;Q5U0E6;Q9Y6E0-2;Q6P0Y1;B4DT57;B4DR80;B4DMR0;H0Y630;Q9NWX4;Q8NBY1;Q499L9;Q9P289-3;Q9P289;Q9P289-2;B4E0Y9;C9JJV0 STK24;HEL-S-95;STK26;MST4;STK25 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit;Serine/threonine-protein kinase 26 no no 0 0 0 8 0 1 62.086 62.114 3 0.00037839 18667 20230619_1888_Aki_TMTPro18x_K_F8 83.061 58.786 71129 58110 57205 73337 71140 84771 71236 69818 93001 89223 88266 81694 83854 82002 86574 109970 86338 96909 65664 53327 59584 72921 72917 84496 72475 72880 93334 88948 90554 83352 85928 85997 88113 109260 82683 92144 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 721940000 15118 2575 14323 28783 23082 23082 1 9606 Homo sapiens 0.06719660915359782 LADFGVLHR Unmodified 1026.5611 0.56106391 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 3 2.92 2 1 1 49.978 50.01 2;3 2.88E-12 13514 20230619_1888_Aki_TMTPro18x_K_F8 219.51 138.21 238960 198300 227480 250170 199250 240220 232790 242900 290640 288650 294330 298320 308980 253520 290560 336750 290980 319850 220890 181970 231760 248250 210370 243690 234660 249210 292990 289550 302480 300950 313930 267410 296080 335990 278600 303870 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 741190000 15119 2326 14324 28784;28785;28786;28787 23083;23084;23085;23086 23086 4 9606 Homo sapiens 0.048845823999727145 LADFHANCR Unmodified 1102.4978 0.49781173 3214 O00451;O00451-2;O00451-3;B4DS89 GFRA2 GDNF family receptor alpha-2 yes no 0 0 0 6.5 0.5 1 1 37.975 38.044 3 2.4284E-05 8463 20230619_1887_Aki_TMTPro18x_K_F7 157.91 122.4 239920 150360 199070 225470 464040 511190 244880 236220 357790 231230 306320 390430 242010 314280 391480 259660 395230 458760 221210 138410 209690 224820 455530 488780 262960 260140 355800 239350 314720 386180 256960 323510 394940 273370 378550 433390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 306480000 15120 3214 14325 28788;28789 23087;23088 23088 2 9606 Homo sapiens -0.04933726379590553 LADGGATNQGR Unmodified 1058.5105 0.51048491 1081 A0A0S2Z3Y1;Q08380;B4DVE1;B4DI70;B3KP88;B4DDG4;K7ESM3;K7EKQ5;K7EP36;K7ERZ6;K7EJD3;K7ES75;K7EN99;K7EQT9 LGALS3BP Galectin-3-binding protein yes no 0 0 0 3.5 0.5 1 1 32.065 32.134 2 0.059331 6388 20230619_1883_Aki_TMTPro18x_K_F4 63.076 48.918 5566.1 3995.2 8454.9 7952.5 10798 11832 9062.4 11414 10286 5571.2 14930 13495 8147.3 11459 13178 2853.5 11898 13844 5165 3690 8380.7 7751.2 10976 11650 9287.3 11527 10556 6190.3 14800 13270 8794.5 11423 13184 3656.5 11410 13026 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21042000 15121 1081 14326 28790;28791 23089 23089 1 9606 Homo sapiens -0.016429917156756346 LADHFGGK Unmodified 843.4239 0.42390173 4715;4568 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1;Q9NQ29-3;Q9NQ29;A8MYV2;Q1W6G4;Q53G47;Q9NQ29-2;D3DU41;B8ZZ10 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 no no 0 0 0 7.5 0.5 1 1 41.787 41.821 3 0.0014032 9978 20230619_1887_Aki_TMTPro18x_K_F7 114.89 77.874 1240100 806610 1089000 1217400 1314100 1397200 1267200 1334200 1663800 1538300 1597500 1476200 1633700 1358200 1275500 1754300 1779400 1496000 1144000 742420 1122800 1197400 1346600 1397400 1292800 1372400 1669900 1542300 1642300 1498300 1649600 1425600 1333700 1740800 1695700 1424700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1531699999.9999998 15122 4715;4568 14327 28792;28793 23090;23091 23090 2 9606 Homo sapiens -0.004073264795692921 LADINYEGR Unmodified 1049.5142 0.5141733 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPW9;A0A8V8TPX4;A0A8V8TRC7;A0A3B3ITD8;A0A024RCC4;H0YDA1;A0A8V8TRD0;A8KA17;A0A8V8TQG5;P52948-3;P52948-4;B4DWF8;A0A8V8TR23 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 3.5 0.5 1 1 46.894 46.973 2 0.00026874 12586 20230619_1883_Aki_TMTPro18x_K_F4 132.84 89.595 126750 105150 122530 127600 134390 147240 137780 138790 175350 153120 142600 141970 169660 135760 135620 166780 170300 172000 117180 96453 125030 127280 138800 147220 139880 142740 175230 153710 148990 144450 170670 141960 140590 167300 162610 163310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97521000 15123 1852 14328 28794;28795 23092;23093 23093 2 9606 Homo sapiens -0.008603219418091612 LADIQIEQLNR Unmodified 1311.7147 0.71466402 3289 O60925;E5RGS4 PFDN1 Prefoldin subunit 1 yes no 0 0 0 5.5 0.5 2 2 55.604 55.674 2;3 0.00058412 16313 20230619_1886_Aki_TMTPro18x_K_F6 134.57 103.19 160430 134890 150970 168480 148920 185700 173530 184720 206700 213530 217330 264680 247570 220930 194970 297650 275130 328740 148300 123760 154260 167600 155730 186390 174610 189530 209200 215780 224070 264860 249380 233360 204200 299270 262840 311710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 130880000 15124 3289 14329 28796;28797;28798;28799 23094;23095 23094 2 9606 Homo sapiens 0.07127527654984078 LADLIER Unmodified 828.47052 0.47051757 1475 P05091;A0A384NPN7;Q53FB6;F8VP50;B4DXX3;V9HW83;P00352;V9HVX6;B4DDF8;Q59EJ0;Q5SYQ8;Q5SYQ9;Q5SYQ7 ALDH2;HEL-S-53e;ALDH1A1;HEL-9 Aldehyde dehydrogenase, mitochondrial;Retinal dehydrogenase 1 yes no 0 0 0 4 0 1 54.065 54.081 2 0.036164 15823 20230619_1883_Aki_TMTPro18x_K_F4 92.47 5.9981 116800 87052 107590 105840 129930 149590 142000 142690 170530 143290 171940 217420 167810 175380 188260 173590 193580 219870 107870 79886 110410 105940 133620 147760 143330 146250 172040 147080 176530 215770 172600 182060 191290 177120 185350 208240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153300000 15125 1475 14330 28800 23096 23096 1 9606 Homo sapiens 0.04942113351705757 LADLIERDR Unmodified 1099.5986 0.59857163 1475 P05091;A0A384NPN7;Q53FB6;F8VP50;B4DXX3;V9HW83;P00352;V9HVX6;B4DDF8;Q59EJ0;Q5SYQ8;Q5SYQ9;Q5SYQ7 ALDH2;HEL-S-53e;ALDH1A1;HEL-9 Aldehyde dehydrogenase, mitochondrial;Retinal dehydrogenase 1 yes no 0 0 1 4 0 1 49.171 49.209 3 0.0030109 13636 20230619_1883_Aki_TMTPro18x_K_F4 89.029 46.691 55912 64020 61395 56265 72162 58076 61409 77224 66850 63801 81757 72295 72213 62368 87710 77153 73140 69611 51871 58504 62007 57584 73628 59137 62786 77153 68370 65418 82736 72751 74719 65418 88055 76916 70097 66209 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54165000 15126 1475 14331 28801 23097 23097 1 9606 Homo sapiens 0.052756288749378655 LADLTGPIIPK Unmodified 1136.6805 0.68051035 3518 P28289;P28289-2 TMOD1 Tropomodulin-1 yes no 0 0 0 2 0 1 61.853 61.863 3 0.0089469 19423 20230619_1881_Aki_TMTPro18x_K_F2 74.841 50.498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15127 3518 14332 28802 23098 23098 1 9606 Homo sapiens 0.11763731234032093 LADQSGLDVIR Unmodified 1185.6354 0.63535107 2055 A8K4V4;H0Y6Y8;B1AL05;Q8N983-4;Q8N983-3;Q8N983-2;Q8N983;Q8N983-6;Q8N983-7;Q86XN0;H0YBU8 MRPL43 39S ribosomal protein L43, mitochondrial yes no 0 0 0 4 0 1 51.591 51.619 2 2.1635E-08 14739 20230619_1883_Aki_TMTPro18x_K_F4 170.89 131.67 152360 137070 165770 157030 180060 177660 188290 178830 221800 216650 208440 200180 240120 176040 180960 230760 245830 212680 141070 125630 167430 157300 185940 178210 190390 183610 223620 216440 215760 203190 241120 185410 188890 229860 234350 202310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 335620000 15128 2055 14333 28803 23099 23099 1 9606 Homo sapiens 0.04995880700835187 LADSGDGAGPSPEEK Unmodified 1428.6369 0.63686721 4311 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 0 1.5 0.5 1 1 43.091 43.132 3 0.050372 11297 20230619_1881_Aki_TMTPro18x_K_F2 43.861 30.198 71060 41635 76022 79709 98479 87623 78509 85008 116880 100450 109080 102030 105550 97951 98312 95788 104330 102950 65629 38467 77135 77410 99872 87941 81522 87415 116570 100790 112060 103370 107550 101040 100410 96723 99757 97713 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64765000 15129 4311 14334 28804;28805 23100 23100 1 9606 Homo sapiens -0.060305747917027475 LADSPPPQVWQLISK Unmodified 1677.909 0.90900673 3434 Q5HY81;P11441 UBL4A Ubiquitin-like protein 4A yes no 0 0 0 2.5 0.5 1 1 63.474 63.493 3 1.0631E-07 20203 20230619_1881_Aki_TMTPro18x_K_F2 129.38 117.69 33575 31135 37768 40602 31014 40078 34680 34752 38652 40312 40580 43433 40254 42116 43356 47570 41904 52672 31104 28569 37936 40209 32885 40430 34902 36036 39243 40544 41563 43905 41293 43748 43981 47989 40182 49935 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84767000 15130 3434 14335 28806;28807 23101 23101 1 9606 Homo sapiens 0.0971685902027275 LADTHFVQR Unmodified 1085.5618 0.56179219 1822 A0A8V8TNN2;A0A8V8TMN9;Q9BT08;E9PHH9;A0A8V8TM54;Q53F76;Q9BUI4 POLR3C DNA-directed RNA polymerase III subunit RPC3 yes no 0 0 0 6.5 0.5 1 1 39.115 39.188 3 6.3553E-06 8906 20230619_1887_Aki_TMTPro18x_K_F7 148.52 110.96 48776 33470 45698 53032 55364 59116 57113 51843 71551 55670 56707 54963 61075 46830 50358 65059 58094 54108 45033 30818 46868 51988 56800 59131 57899 53589 71448 56078 59047 55582 61664 49545 51903 64431 55482 51522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58840000 15131 1822 14336 28808;28809 23102 23102 1 9606 Homo sapiens 0.02243377049035189 LADVLWNSQIPLLICR Unmodified 1910.0448 0.044788708 3858 Q13564-3;Q13564-2;Q13564;Q13564-4;H3BMR3;J3QRA5;J3KRK3 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes no 0 0 0 5.5 0.5 1 1 66.227 66.27 3 1.1589E-19 20850 20230619_1886_Aki_TMTPro18x_K_F6 211.51 197.48 15199 15684 18463 17523 15802 17757 18574 18871 17568 20973 20757 18805 18214 16496 19034 20840 19969 19391 14102 14365 18439 17560 16685 17969 18549 19256 18095 21006 21027 19117 18715 17318 19403 20787 19093 18435 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 240410000 15132 3858 14337 28810;28811 23103;23104 23104 2 9606 Homo sapiens 0.12616810539429935 LAEAEETAR Unmodified 988.48254 0.48253882 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24;E2PSM9 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 1 0 1 37.999 37.999 2 2.6094E-06 9182 20230619_1880_Aki_TMTPro18x_K_F1 189 123.75 67324 37302 90020 91537 132260 141800 100070 120380 112790 73145 121250 134450 107310 101020 118400 43848 127000 116130 62301 34624 90194 88519 133090 138960 103230 123140 114350 78366 123510 132450 110540 102300 120240 49295 121350 109580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 266170000 15133 2414 14338 28812 23105 23105 1 9606 Homo sapiens -0.012163146957732351 LAEAFAEELHER Unmodified 1413.6888 0.6888432 1636 A0A7P0TAV2;A0A6Q8PGK3;A0A7P0T9G7;B7ZLW8;Q99707;B4DST3;A0A7P0TAJ0;Q99707-2;Q6MZH4;B1ANE3 MTR;DKFZp686A22123 Methionine synthase yes no 0 0 0 2 0 1 56.325 56.344 3 1.0003E-45 17128 20230619_1881_Aki_TMTPro18x_K_F2 230.81 203.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15134 1636 14339 28813 23106 23106 1 9606 Homo sapiens -0.0014536658729866758 LAEAHQQECCQK Unmodified 1500.6449 0.64494625 4752 Q9Y5X3;Q53FH8;Q6P5V6;B7Z476;A0A087WUY5 SNX5 Sorting nexin-5 yes no 0 0 0 3.5 0.5 1 1 34.097 34.156 3 7.9986E-05 7260 20230619_1882_Aki_TMTPro18x_K_F3 113.77 92.814 15495 10413 21632 17111 23837 28792 20913 22907 23171 21901 30695 30493 27037 29754 23221 16801 33545 39673 14359 9593 21472 16877 24511 28073 21347 23768 23763 22459 30971 30522 27578 30035 24214 18393 32038 37416 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37577000 15135 4752 14340 28814;28815 23107 23107 1 9606 Homo sapiens -0.08535042347580202 LAEALYIADR Unmodified 1133.6081 0.60807369 3859 Q6I9S2;Q13573;G3V3A4;G3V4X8;B7Z9X2;B4DY36;A0A024R6E3;B4DEG7;Q9ULA6;Q6P151 SNW1 SNW domain-containing protein 1 yes no 0 0 0 5 0 1 58.764 58.82 2 0.0036949 17423 20230619_1885_Aki_TMTPro18x_K_F5 93.325 57.887 81691 74576 72248 86164 74198 83890 83410 79630 95140 81194 82202 75274 88645 71669 84343 84612 85832 89928 75520 68351 74293 86034 77212 84921 83919 81720 95716 81831 85195 76599 90040 74771 85925 85118 82137 85343 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41237000 15136 3859 14341 28816 23108 23108 1 9606 Homo sapiens 0.04661397160452907 LAEAQIEELR Unmodified 1170.6245 0.62445203 694 A0A024RBT2;Q502X2;A0A0S2Z5U7;Q9NR28-2;Q9NR28;A0A0S2Z5P6;Q9NR28-3;K7X1S0;Q53HB7 DIABLO Diablo homolog, mitochondrial yes no 0 0 0 2 0 1 51.363 51.409 2 6.1911E-07 15028 20230619_1881_Aki_TMTPro18x_K_F2 185.27 138.07 181920 160560 166240 193180 165490 203870 199150 196090 212140 218950 218930 228240 247320 204000 224290 267250 249440 272750 168180 147240 170370 192540 173040 205130 199260 201510 215730 220320 225630 230520 250400 214620 230110 267710 238580 258920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 310860000 15137 694 14342 28817 23109 23109 1 9606 Homo sapiens 0.04596478326561737 LAEDAPNFDGPAAEGQPGQK Unmodified 2010.9283 0.9282982 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;H0YCH5;H0YEC5;H0YD77 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 2.75 0.829 2 1 1 52.051 52.093 3 2.3857E-22 14946 20230619_1883_Aki_TMTPro18x_K_F4 175.39 157.38 104260 85845 92020 121940 109880 129770 123940 127520 137170 141260 143420 140220 145270 120890 129720 162020 144900 166680 96317 78879 94970 120210 113190 130520 124550 130790 139280 141970 146910 141790 147460 127540 133210 162300 138640 158180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 355420000 15138 3752 14343 28818;28819;28820;28821 23110;23111;23112;23113 23112 4 9606 Homo sapiens -0.03672881217448776 LAEDFLQ Unmodified 834.41233 0.41233399 70 A0A024QZY0;Q86WA6-2;Q86WA6 BPHL Valacyclovir hydrolase yes no 0 0 0 3 0 1 62.892 62.922 2 0.071331 19631 20230619_1882_Aki_TMTPro18x_K_F3 76.592 69.681 28754 26182 26601 27410 20348 27171 27563 27176 29021 27905 32786 32825 31653 27683 30767 32522 32538 37149 26591 23976 27118 27594 21864 27495 27431 27792 29617 28310 33416 32934 32303 28982 31411 32858 31147 35218 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15668000 15139 70 14344 28822 23114 23114 1 9606 Homo sapiens -0.011495682935674267 LAEEESCREDVTR Unmodified 1592.71 0.71004893 4310 Q92896;Q92896-3;Q92896-2;H3BM42;H3BQU9;H3BRD8 GLG1 Golgi apparatus protein 1 yes no 0 0 1 1 0 1 35.607 35.607 3 9.1489E-22 8223 20230619_1880_Aki_TMTPro18x_K_F1 220.53 204.59 56858 41449 47453 73174 113360 119140 115040 102020 145870 100590 110400 110210 120170 99679 100870 126240 131420 112630 52467 38210 50173 71776 112580 116530 116670 105350 145310 102150 115340 111160 121460 104560 104730 125600 125320 107190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 272160000 15140 4310 14345 28823 23115 23115 1 9606 Homo sapiens -0.06259769340772436 LAEENPDLQEAYIAK Unmodified 1702.8414 0.84138068 1624 Q8TB36;Q8TB36-2;A0A6Q8PGS2;A0A6Q8PGL3;B4DIH2;A0A6Q8PH79;A0A6Q8PFG4;A0A7I2RYU0;A0A6Q8PEZ4;A0A6Q8PHN7;A0A6Q8PH88;A0A6Q8PEX8;A0A6Q8PH97;A0A6Q8PGU0;A0A6Q8PHC1;A0A6Q8PFF4 GDAP1 Ganglioside-induced differentiation-associated protein 1 yes no 0 0 0 1 0 1 56.224 56.224 3 0.063369 16929 20230619_1880_Aki_TMTPro18x_K_F1 50.155 26.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15141 1624 14346 28824 23116 23116 1 9606 Homo sapiens 0.018073642988383654 LAEEQLR Unmodified 857.46068 0.46068117 781 A0A024RDW4;Q9NWB6 FLJ10154;ARGLU1 Arginine and glutamate-rich protein 1 yes no 0 0 0 2.5 0.5 1 1 39.895 39.958 2 0.0042703 9777 20230619_1881_Aki_TMTPro18x_K_F2 149.4 21.017 302870 223210 257930 287930 337520 317190 305080 291980 391130 353300 364660 361020 360220 313220 274300 347980 434990 371320 279540 204970 267040 285780 343240 318100 312080 301710 392540 354130 375020 364450 363930 326530 289670 350240 414200 352670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 242450000 15142 781 14347 28825;28826 23117 23117 1 9606 Homo sapiens 0.02624925346344753 LAEIGAPIQGNREELVER Unmodified 1993.0593 0.059252799 3850 Q13435;E9PPJ0;Q7Z3K9;E9PJ04;H0YCG1;E9PJT3 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 1 4.5 0.5 1 1 50.313 50.367 3 3.8724E-30 14150 20230619_1883_Aki_TMTPro18x_K_F4 223.97 198.36 253380 216050 258800 254050 262350 292340 277930 285720 297040 297210 310800 271340 318560 278890 291020 326930 307660 291630 234390 198100 262470 254030 272630 292590 280030 292590 302140 299000 318320 277120 323610 289910 297530 325720 294100 277420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1011099999.9999999 15143 3850 14348 28827;28828 23118;23119 23118 2 9606 Homo sapiens 0.1024455422129904 LAEIHGVPR Unmodified 990.56106 0.56106391 2811 O14531;D3DRG7 DPYSL4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 6.5 0.5 1 1 40.122 40.201 3 2.9221E-05 9338 20230619_1887_Aki_TMTPro18x_K_F7 155.07 123.7 124750 89378 99994 135330 136740 112290 140250 127210 130820 110630 159520 137080 135390 121370 130090 138750 148160 137910 115080 82233 104370 132500 138910 115690 140880 128600 134790 113510 161120 137590 138730 126570 133430 139090 141520 131030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135920000 15144 2811 14349 28829;28830 23120 23120 1 9606 Homo sapiens 0.06540582399986761 LAEISDVWEEMK Unmodified 1448.6857 0.68573166 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 3 0.816 1 1 1 64.16 64.18 3 0.0013893 20098 20230619_1883_Aki_TMTPro18x_K_F4 93.345 73.767 16423 13759 14269 15395 17365 19401 16544 18375 20177 14269 19441 21242 21751 21730 20038 21841 22126 28628 15171 12611 14727 15469 17783 19292 16845 18730 20298 14868 20095 21276 22068 22396 20533 22320 21195 27096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83559000 15145 2337;3778;3779 14350 28831;28832;28833 23121;23122 23122 2 9606 Homo sapiens -0.02066377756318616 LAELHADLK Unmodified 1008.5604 0.56039521 2239 B2R6S9;P30533;A8K8F6;A0A3B3IRQ7 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes no 0 0 0 5.5 0.5 1 1 48.555 48.633 3 0.00059892 13336 20230619_1886_Aki_TMTPro18x_K_F6 109.42 46.596 216090 172930 201140 205780 214550 252940 237100 214990 278050 246610 261440 284990 275890 237110 272840 306920 288390 286400 199680 158620 205830 205740 222600 251300 238960 223170 280210 248810 269860 285960 281020 249780 278540 306070 275770 272250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 472130000 15146 2239 14351 28834;28835 23123;23124 23124 2 9606 Homo sapiens 0.05645742960257394 LAELLTQQHGLQCR Unmodified 1665.8621 0.86207332 2472 B4DF80;Q9H6R4-4;Q9H6R4;A0A0A0MRW6;Q9H6R4-2;B3KPN5 NOL6 Nucleolar protein 6 yes no 0 0 0 2 0 1 53.311 53.344 3 1.3212E-46 15873 20230619_1881_Aki_TMTPro18x_K_F2 297.16 246.87 87014 83037 89115 97170 93677 105010 105070 101800 112340 117360 108450 104570 119910 100210 109730 128290 119540 123620 80559 76104 90479 97084 97243 105530 105510 104640 113950 117380 111940 106630 121530 105020 112410 128150 114300 117450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 346480000 15147 2472 14352 28836 23125 23125 1 9606 Homo sapiens 0.05577676197481196 LAELSDYRR Unmodified 1121.5829 0.58292157 1111 A0A0S2Z4Z0;Q96PK6;B4DNG4 RBM14 RNA-binding protein 14 yes no 0 0 1 6.5 0.5 1 1 43.154 43.24 3 3.7547E-05 10868 20230619_1886_Aki_TMTPro18x_K_F6 153.24 67.98 254310 216460 237600 252980 285840 281740 273870 269300 295140 278730 282020 266970 287440 227110 293440 324840 292560 268010 235090 198460 243520 252900 292530 282570 277500 276240 299020 280840 290170 270380 293360 240750 298410 321610 279760 255250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 405800000 15148 1111 14353 28837;28838 23126;23127 23126 2 9606 Homo sapiens 0.0269934235789151 LAEMPADSGYPAYLGAR Oxidation (M) 1796.8403 0.84033482 3566 P38606-2;P38606;A0A994J738;B7Z2V6 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 1 0 5 0 1 52.971 53.043 3 1.7253E-13 15081 20230619_1885_Aki_TMTPro18x_K_F5 149.37 138.32 35015 33745 34225 44482 38524 35343 39177 40182 45196 49306 53645 56218 57622 53466 50181 64460 52314 60108 32407 30964 34950 43907 39641 36565 39662 40979 46064 49543 54829 56680 58354 55790 51360 64317 50087 57108 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68902000 15149 3566 14354 28839 23128 23128 2235 1 9606 Homo sapiens -0.026211733417312644 LAEMPADSGYPAYLGAR Unmodified 1780.8454 0.8454202 3566 P38606-2;P38606;A0A994J738;B7Z2V6 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 0 6.67 0.471 1 2 58.061 58.119 2;3 4.365E-30 17316 20230619_1886_Aki_TMTPro18x_K_F6 180.27 166.02 143470 114020 131960 153080 111220 140670 150900 153630 177420 175480 182620 190700 192460 174130 172710 216250 207590 235540 132550 104720 134850 151200 118420 143420 150700 156670 179440 176630 187600 192380 195280 182380 178150 217570 198480 223410 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 199170000 15150 3566 14354 28840;28841;28842 23129;23130 23129 2 9606 Homo sapiens -0.01376869479099696 LAENFCVCHLATGDMLR Oxidation (M) 2021.9121 0.91213633 1240 F8W1A4;A0A140VK93;P54819-5;P54819-2;P54819;P54819-3;B4DLK2;G3V213;F8VZG5;A0A5F9ZHP2 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes no 0 1 0 6.5 0.5 1 1 52.914 52.988 3 1.4901E-06 14932 20230619_1887_Aki_TMTPro18x_K_F7 110.37 96.943 80695 75206 89949 83226 83069 83494 81837 81819 91313 100150 93395 99549 108980 82223 98408 132030 117090 114870 74752 68896 90436 83448 86711 84431 82935 84202 92671 100190 96457 100540 110180 88043 101470 130800 111830 109300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290800000 15151 1240 14355 28843;28844 23131 23131 780 1 9606 Homo sapiens -0.057943252511904575 LAENFCVCHLATGDMLR Unmodified 2005.9172 0.91722171 1240 F8W1A4;A0A140VK93;P54819-5;P54819-2;P54819;P54819-3;B4DLK2;G3V213;F8VZG5;A0A5F9ZHP2 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes no 0 0 0 8 0 1 57.374 57.426 3 2.2185E-38 16746 20230619_1888_Aki_TMTPro18x_K_F8 254.53 232.99 97513 90212 100070 90551 78255 89943 88608 95131 94924 109650 86681 94065 112010 93721 89340 126700 114350 122010 90260 82577 101040 91510 83308 91167 89018 97191 96169 109530 90477 96195 112460 98456 92834 126410 109220 115910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 542900000 15152 1240 14355 28845 23132 23132 1 9606 Homo sapiens -0.045500213885816265 LAENIDAQLK Unmodified 1113.603 0.60298831 38 A0A024QZF1;P37198;M0QXN5 hCG_19665;NUP62 Nuclear pore glycoprotein p62 yes no 0 0 0 5 0 1 53.437 53.509 3 0.00014418 15251 20230619_1885_Aki_TMTPro18x_K_F5 121.93 36.165 90990 76184 81712 86829 80480 95876 89330 96662 119900 102870 104640 122490 128080 109760 94676 138910 133550 125250 84077 69838 83796 86960 84063 96280 90518 98846 119790 104270 109180 123030 128450 115140 99246 138230 127350 119140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55578000 15153 38 14356 28846 23133 23133 1 9606 Homo sapiens 0.050730932978467536 LAEPYGK Unmodified 776.40685 0.40685468 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;H0Y8T4;P43243-2;B4DRS1;B3KM87;Q5CZA7;B4DF66;Q9H4N1;D6RBK5 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 yes no 0 0 0 6 0.707 1 2 1 44.933 45.018 2;3 0.0025209 11326 20230619_1887_Aki_TMTPro18x_K_F7 124.37 43.996 1110000 696990 1019700 1083000 1367100 1412300 1260600 1223500 1537600 1224400 1418700 1337800 1543000 1231900 1251300 1066500 1640700 1370000 1024200 641870 1048900 1065600 1389500 1398500 1285400 1262900 1545200 1241700 1465700 1349200 1556800 1266400 1297700 1092200 1564200 1299000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1203600000 15154 1059 14357 28847;28848;28849;28850 23134;23135;23136;23137 23137 4 9606 Homo sapiens 0.00970752914622608 LAEQAER Unmodified 815.41373 0.41373097 2805;3709;3511;145;3701;3535;3536 D0PNI1;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1;P27348;E9PG15;Q53RR5;V9HWD6;P31946-2;P31946;B5BU24;Q4VY20;Q4VY19;A0A0J9YWE8;Q59EQ2;A0A024R1K7;Q04917;B2R6N6;F8WEB6;A2IDB1;P31947-2;P31947;P61981;B3KNB4;B4DE78;V9HW98;P62258;G9K389;G9K388;B4DJB0;B4DJF2;I3L3T1;I3L0W5 YWHAZ;YWHAQ;HEL-S-1;YWHAB;YWHAH;SFN;YWHAG;HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon no no 0 0 0 2 0.816 1 1 1 32.654 32.698 2 0.0052455 7058 20230619_1880_Aki_TMTPro18x_K_F1 142.36 68.725 742630 251530 962850 1012100 1403200 1323500 977000 1343500 868530 602910 1430800 1698700 846430 1124000 1359300 266770 1590500 1353800 685860 237240 966250 962070 1408400 1313800 1008200 1350700 911100 681700 1418600 1653200 909450 1131900 1379600 346550 1517900 1275200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1355600000 15155 2805;3511;3535;145;3536;3701;3709 14358 28851;28852;28853 23138;23139 23138 2 9606 Homo sapiens -0.001359342048090184 LAEQAERYDDMAACMK Oxidation (M) 1916.8067 0.80666821 2805 D0PNI1;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1 YWHAZ 14-3-3 protein zeta/delta yes no 0 1 1 4 0 1 48.467 48.505 3 0.0030711 13298 20230619_1883_Aki_TMTPro18x_K_F4 71.601 63.211 103140 134040 122480 89990 106780 79640 93023 117810 90409 111650 112750 87324 91348 76934 118550 121440 111550 88565 95867 122240 122300 94684 111410 82486 94708 117450 93254 112310 113580 89551 95185 82029 119700 119480 106640 84552 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43039000 15156 2805 14359 28854 23140 23140 1674;1675 1 9606 Homo sapiens -0.11506286167468716 LAEQAERYDEMVESMK Unmodified 1927.8656 0.86556329 3709 V9HW98;P62258;G9K389;G9K388;B4DJB0;B4DJF2;I3L3T1 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 0 1 4.5 0.5 1 1 60.281 60.308 3 0.00069267 18015 20230619_1885_Aki_TMTPro18x_K_F5 77.996 67.361 217650 201780 218630 227220 179570 228120 229570 232430 216500 264880 243510 255740 268670 231820 261670 294120 290290 289550 201430 184880 221520 227480 191100 230700 228290 238030 222650 265550 249830 259220 273130 243210 267960 294210 277460 275070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 350930000 15157 3709 14360 28855;28856 23141;23142 23142 2 9606 Homo sapiens -0.0612548660151333 LAEQFPR Unmodified 859.4552 0.45520186 4127 Q6PJ77;Q96K17-2;Q96K17;E9PL10 BTF3L4 Transcription factor BTF3;Transcription factor BTF3 homolog 4 yes no 0 0 0 5.5 0.5 1 1 44.621 44.705 2 0.02183 11532 20230619_1886_Aki_TMTPro18x_K_F6 102.72 52.68 292090 255600 245850 279820 294400 339320 295840 297400 334710 326010 331680 385370 380310 332320 300150 462910 467110 456510 269850 234190 254540 281410 302260 337700 299410 307490 338790 329790 342870 386810 383080 351360 316730 462180 445240 433700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 431690000 15158 4127 14361 28857;28858 23143 23143 1 9606 Homo sapiens 0.01985246554522746 LAESVEK Unmodified 774.41233 0.41233399 4746 Q9Y5B9;Q0VGA3 SUPT16H FACT complex subunit SPT16 yes no 0 0 0 4 0 1 43.957 44.001 2 0.052567 11128 20230619_1883_Aki_TMTPro18x_K_F4 85.064 27.505 73521 53868 79339 89969 109870 116850 89026 108230 102860 92271 120450 126740 106880 104280 121000 80639 136400 119330 67983 49619 80623 88171 111120 115860 91470 110680 104660 95154 122230 126270 110280 107040 123400 83733 130240 113000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 229640000 15159 4746 14362 28859 23144 23144 1 9606 Homo sapiens 0.016104317064332463 LAETQEEISAEVSAK Unmodified 1603.7941 0.79409613 4568 Q9NQ29-3;Q9NQ29;A8MYV2;Q1W6G4;Q53G47;Q9NQ29-2;D3DU41;B8ZZ10;B8ZZ09 LUC7L Putative RNA-binding protein Luc7-like 1 yes no 0 0 0 2.5 0.5 1 1 56.916 56.949 3 0.00039577 17187 20230619_1882_Aki_TMTPro18x_K_F3 88.311 75.433 20650 24228 22098 21499 20304 23293 23746 23863 28461 21298 25612 23308 22370 17094 29792 20868 21059 23726 19158 22141 22299 21986 21332 23449 23893 24272 28579 21731 26270 23370 23263 18050 29634 21098 20252 22495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8289600 15160 4568 14363 28860;28861 23145;23146 23146 2 9606 Homo sapiens 0.01635085027783134 LAETQNIAPSFVK Unmodified 1416.7613 0.76127986 2075 A8K5H7;Q96TA2-3;Q96TA2-2;Q96TA2;Q5T8D2;Q5T8D1;Q96I63 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes no 0 0 0 8 0 1 56.672 56.729 3 0.0014476 16444 20230619_1888_Aki_TMTPro18x_K_F8 79.466 66.039 68991 61716 67872 78966 72533 85269 82197 89822 102300 71337 74775 66214 76598 61457 76197 83391 68585 77995 63822 56625 69190 78404 75299 85822 82933 90929 101880 72980 78046 67376 78076 64729 77115 83123 65760 74103 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124780000 15161 2075 14364 28862 23147 23147 1 9606 Homo sapiens 0.06956967486235044 LAETYLHR Unmodified 1001.5294 0.52942943 2256 P26196;B2R858 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 0 7 0.816 1 1 1 41.542 41.597 3 2.2422E-07 9903 20230619_1887_Aki_TMTPro18x_K_F7 182.39 116.13 100530 83229 88606 97840 102350 138850 99436 100050 185210 94305 95259 79042 106250 80398 97572 102690 98952 81715 92873 76321 91290 98110 105560 136330 102990 104710 179950 95422 102310 81080 107650 84097 99467 101660 94544 77899 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 354340000 15162 2256 14365 28863;28864;28865 23148 23148 1 9606 Homo sapiens 0.02872589646040069 LAEVGQYEQVK Unmodified 1262.6507 0.65066678 1957 A5YKK6;A5YKK6-2;A5YKK6-3;A5YKK6-4 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 5 0 1 51.609 51.685 3 0.00052454 14492 20230619_1885_Aki_TMTPro18x_K_F5 95.477 78.11 107750 89846 94071 102560 98776 123700 110680 111740 136850 108300 107170 103310 102310 96498 104910 109200 119930 115070 99541 82364 96842 102820 102740 123190 111690 114870 136670 109560 111130 104890 104800 100410 107480 109860 114570 109250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79345000 15163 1957 14366 28866 23149 23149 1 9606 Homo sapiens 0.02984747498021534 LAEVSQNIEK Unmodified 1129.5979 0.59790293 1849 B7ZL14;A0A994J3U5;A0A994J4A3;H0Y7W6;B7ZL13;A0A994J6U4;A0A994J3V8;A0A8V8TQ35;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3;B4DEQ5 FNBP1 Formin-binding protein 1 yes no 0 0 0 4.5 0.5 1 1 49.841 49.896 3 0.0030175 13712 20230619_1885_Aki_TMTPro18x_K_F5 77.14 29.104 67286 54779 57885 64646 65905 73555 68549 70694 90355 74379 72806 74169 84960 66928 75473 88764 88542 76980 62143 50237 59746 64595 67959 73642 69625 72506 90095 75005 76062 75086 85863 70439 77702 88154 84510 73284 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39560000 15164 1849 14367 28867;28868 23150 23150 1 9606 Homo sapiens 0.038287894352379226 LAFAQHQAEVAK Unmodified 1311.6935 0.69353465 84 Q96S66;A0A6Q8PG75;Q96S66-2;A0A6Q8PEZ7;A0A024R0G0;A0A6Q8PHQ1;A0A6Q8PG30;A0A024R095;A0A6Q8PGA4;A0A6Q8PG14;Q5T1P5;A0A6Q8PG68;A0A6Q8PFF7;A0A8I5KPC2 CLCC1 Chloride channel CLIC-like protein 1 yes no 0 0 0 8 0 1 44.874 44.903 3 1.3724E-05 11436 20230619_1888_Aki_TMTPro18x_K_F8 131.17 102.41 86120 62270 80869 86443 84987 95768 95448 93536 120630 100280 105130 119660 117750 103350 99139 128990 136580 132220 79535 57231 82690 85416 88294 96056 96393 95905 120800 101620 109230 120040 118970 108470 103370 129300 130290 125560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78430000 15165 84 14368 28869 23151 23151 1 9606 Homo sapiens 0.0501556234612508 LAFHGILLHGLEDR Unmodified 1589.8678 0.86781062 3672 P57772;C9J8T0;P57772-2 EEFSEC Selenocysteine-specific elongation factor yes no 0 0 0 2 0 1 54.039 54.067 4 1.6489E-06 16221 20230619_1881_Aki_TMTPro18x_K_F2 123.02 108.06 9548.6 10229 7657.4 8788.3 6229.1 8414.6 10155 10278 11519 16116 20762 25695 19929 19414 19267 18307 18065 25289 8831.9 9347.7 7925.1 9000 6705.8 8586.4 10059 10531 12030 16251 20864 25411 20343 20165 19535 18810 17346 23919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39984000 15166 3672 14369 28870 23152 23152 1 9606 Homo sapiens 0.0964714277145049 LAFLHEK Unmodified 856.48069 0.48068833 4156 Q7L8L6 FASTKD5 FAST kinase domain-containing protein 5 yes yes 0 0 0 4.5 3.5 1 1 48.352 48.385 3 0.003853 13705 20230619_1880_Aki_TMTPro18x_K_F1 113.7 77.301 88452 72608 91540 95054 90790 106310 97950 98806 142700 83668 84807 81412 92790 73566 84254 98284 102250 87427 81814 66656 92749 94288 94676 106440 99696 101060 140350 85435 90051 82551 94060 77463 86888 97723 97552 83208 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41009000 15167 4156 14370 28871;28872 23153;23154 23153 2 9606 Homo sapiens 0.04670721076945483 LAFLLFK Unmodified 850.53166 0.53166127 2259 B2R894;Q96DV4;Q96DV4-2 MRPL38 39S ribosomal protein L38, mitochondrial yes no 0 0 0 7 0 1 65.096 65.122 2 0.028142 20136 20230619_1887_Aki_TMTPro18x_K_F7 85.306 55.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15168 2259 14371 28873 23155 23155 1 9606 Homo sapiens 0.10041670121802326 LAFYPNQDGDILR Unmodified 1520.7623 0.7623425 495 Q14C86-6;Q14C86;Q14C86-2;Q14C86-5;Q14C86-4;A0A024R8A2;A0A024R862;F8W9S7;Q14C86-3;A0A024R875;B3KN67;B3KTX2;B3KMM3 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 0 0 0 6.5 0.5 1 1 60.251 60.301 2 1.6106000000000001E-27 18274 20230619_1886_Aki_TMTPro18x_K_F6 251.43 217.23 68900 57578 69104 76102 58466 73819 67496 68229 78931 91643 97924 96611 109470 87917 89668 112470 101430 110820 63720 52860 70068 75286 61899 74667 67933 70734 80578 91501 100050 97592 110380 92296 92308 112470 97003 105240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97713000 15169 495 14372 28874;28875 23156;23157 23156 2 9606 Homo sapiens 0.022791818551922916 LAGAFSSDTSFF Unmodified 1248.5663 0.56626845 2723 B9A6J2;Q15042;Q15042-3;D3DP75;A0A8I5KT44 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes no 0 0 0 7 0.816 1 1 1 65.849 65.878 2 0.00064721 20449 20230619_1887_Aki_TMTPro18x_K_F7 100.19 88.82 61275 56801 64128 66801 83417 67599 84264 70833 91675 71278 72931 59343 90583 77955 81680 87592 54554 49091 56728 52066 65193 66672 84931 68451 85083 72188 92199 71724 76405 61518 91436 80251 81751 85728 52422 47055 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144280000 15170 2723 14373 28876;28877;28878 23158 23158 1 9606 Homo sapiens -0.04807203318705433 LAGANPAVITCDELLLGHEK Unmodified 2120.0936 0.093589394 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 6 0.816 1 1 1 60.575 60.625 3 9.634E-30 18321 20230619_1886_Aki_TMTPro18x_K_F6 202.97 186.09 152540 130320 142630 157760 132490 152600 166450 153100 157170 187290 174230 179280 193690 157360 171720 219370 190590 206000 141020 119520 145670 157010 139340 154720 165580 157350 161500 187130 178860 181660 195980 166350 176320 218550 182280 195740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 615760000 15171 3758 14374 28879;28880;28881 23159;23160 23160 2 9606 Homo sapiens 0.07834634317896416 LAGDHIEYYK Unmodified 1207.5873 0.58733824 878 E7EVY0;A0A384NLA7;A0A087X0L7;J3KNA0;Q15070-2;Q15070;Q2M1J6;C9JC63;Q15070-3 OXA1L Mitochondrial inner membrane protein OXA1L yes no 0 0 0 4.5 0.5 1 1 46.265 46.325 3 0.00010871 12165 20230619_1885_Aki_TMTPro18x_K_F5 153.97 113.38 78476 61721 74630 90340 99881 97893 104740 105630 114910 97416 114690 136310 122960 110950 131430 114950 130700 146180 72518 56742 76607 88942 101780 98589 105610 107180 116420 100080 118240 135700 125680 115490 133370 117250 125170 138450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 262320000 15172 878 14375 28882;28883 23161 23161 1 9606 Homo sapiens -0.008151932192049571 LAGDPSAGDGAAPR Unmodified 1253.6 0.60002819 141 A0A024R1I3;Q96GD0 PDXP Pyridoxal phosphate phosphatase yes no 0 0 0 2.5 0.5 1 1 38.259 38.317 2 1.1217999999999999E-21 9034 20230619_1881_Aki_TMTPro18x_K_F2 227.81 167.37 107700 80156 100090 108870 92972 92674 103040 98550 120840 111860 129380 127060 122460 107960 114100 126850 133790 118010 99471 73643 102240 107370 97364 95099 103890 100690 122390 112810 132020 127680 124850 112950 117320 126650 127710 112230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113780000 15173 141 14376 28884;28885 23162;23163 23162 2 9606 Homo sapiens -0.016627818269626005 LAGEELAGEEAPQEK Unmodified 1569.7522 0.75223132 4171 Q7Z4V5-2;Q7Z4V5;K7EPS6;A0A087WX58 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 0 0 0 1.5 0.5 1 1 49.306 49.336 3 6.9185E-06 14181 20230619_1881_Aki_TMTPro18x_K_F2 115.83 100.62 123050 88619 103110 120960 136110 145090 131100 121150 152920 133250 161390 137200 149960 141480 146800 164490 188660 171760 113540 81434 107000 119750 138670 144320 133120 125780 154800 134230 164530 139410 153410 146970 151730 165280 179990 163120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 572540000 15174 4171 14377 28886;28887 23164 23164 1 9606 Homo sapiens -0.009854706607256958 LAGESESNLRK Unmodified 1202.6255 0.62551466 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1;A0A7P0TAY0 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 1 6 0.816 1 1 1 38.858 38.937 3 0.00038798 9122 20230619_1886_Aki_TMTPro18x_K_F6 100.69 66.308 554160 451550 569020 563700 738670 715130 704010 667280 781650 678120 814380 599630 585160 511110 691920 531190 658230 474740 512520 414340 579240 562100 752070 710800 714150 685190 792620 682570 822670 609800 609530 531140 698910 531000 628840 452180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 864640000 15175 3656 14378 28888;28889;28890 23165;23166 23166 2 9606 Homo sapiens 0.03230692695456128 LAGFLDLTEQEFR Unmodified 1537.7777 0.77765821 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;B0QY90;B3KNG0;Q7Z5X3;Q8N7H0 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 0 5.75 0.829 2 1 1 64.912 64.952 2;3 5.4009999999999996E-36 20312 20230619_1886_Aki_TMTPro18x_K_F6 303.71 259.39 79756 60395 68702 71492 74673 72542 73761 73472 78047 89825 89182 88715 90309 79011 90210 102430 89453 97267 73629 55405 70796 71321 77014 73341 74586 75436 79789 89843 91041 89802 92135 83046 91765 102230 85649 92411 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 504070000 15176 2176 14379 28891;28892;28893;28894 23167;23168 23168 2 9606 Homo sapiens 0.03028048652322468 LAGGDWFTSR Unmodified 1108.5302 0.53015772 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 4.5 3.5 1 1 56.348 56.376 2 1.0183E-06 17004 20230619_1880_Aki_TMTPro18x_K_F1 207.29 159.71 379300 358820 409500 404400 348490 459050 427180 390810 422340 452720 453020 425680 442280 378230 562620 392290 414660 449980 351300 328760 412630 405480 369310 458410 426120 405740 431910 453390 463050 431650 457250 392610 560890 397810 398420 426650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 353460000 15177 1860 14380 28895;28896 23169;23170 23169 2 9606 Homo sapiens -0.019766157049161848 LAGIINFQRPK Unmodified 1255.7401 0.74009091 1088 A0A0S2Z489;O00232-2;O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 1 7 0 1 54.228 54.292 3 0.00011328 15451 20230619_1887_Aki_TMTPro18x_K_F7 118.81 88.375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15178 1088 14381 28897 23171 23171 1 9606 Homo sapiens 0.12245046968064344 LAGLFNEQR Unmodified 1046.5509 0.55089316 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2;A0A024R3G0 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 7.5 0.5 1 1 54.272 54.339 2 0.00015556 15398 20230619_1888_Aki_TMTPro18x_K_F8 146.58 112.79 586020 479520 512950 590400 599290 731300 688660 628190 753970 569910 537870 516030 569210 455740 639030 635930 599030 545530 541310 439940 529100 588820 618770 726210 690770 647440 755370 577910 563560 524600 583170 481670 646340 631130 573160 519300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 974790000 15179 874 14382 28898;28899 23172 23172 1 9606 Homo sapiens 0.02947974674748366 LAGLHDAILR Unmodified 1077.6295 0.62947783 831 A0A2R8Y473;A0A590UJS8;B4DGL8;A0A087WW65;B3KM98;A0A0S2Z2Z3;A0A5F9ZA98;O75027-3;O75027;O75027-2;A0A0S2Z367 ABCB7 ATP-binding cassette sub-family B member 7, mitochondrial yes no 0 0 0 1 0 1 47.812 47.812 3 7.6385E-06 13478 20230619_1880_Aki_TMTPro18x_K_F1 156.83 63.649 52972 43947 47228 56153 48357 58712 52717 59882 62264 66663 60224 60817 75772 59330 59503 77768 73706 68471 48942 40332 48530 55729 50326 59185 53220 61252 62870 66822 62559 61977 76046 62242 61674 77280 70348 65152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56765000 15180 831 14383 28900 23173 23173 1 9606 Homo sapiens 0.0937682697983746 LAGLHQVTR Unmodified 993.57196 0.57196295 4443 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 yes yes 0 0 0 2.5 0.5 1 1 36.858 36.914 3 1.2783E-05 8343 20230619_1882_Aki_TMTPro18x_K_F3 145.72 93.007 58555 46516 49680 58310 65777 68268 66701 60817 88080 54507 67658 59402 60231 60798 60444 61234 70804 65488 54066 42689 51500 58032 67096 68115 67810 62500 87572 55667 69997 60181 61805 62653 62034 61774 67608 62175 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54361000 15181 4443 14384 28901;28902 23174 23174 1 9606 Homo sapiens 0.0749198477428763 LAGNEQVTR Unmodified 986.51451 0.51450765 3663 Q6PJJ2;P56182;Q53FR7;B4DZM3;D6RE82 RRP1 Ribosomal RNA processing protein 1 homolog A yes no 0 0 0 4 0 1 35.111 35.159 2 0.00010127 7615 20230619_1883_Aki_TMTPro18x_K_F4 155.42 106 36199 20417 46942 49507 66193 74755 46412 58344 60100 37090 60223 71909 62142 51710 58682 22892 69634 65568 33490 18945 47090 47861 66713 73225 48410 60144 60374 39719 61945 70645 63191 52529 60127 25981 66491 61839 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38562000 15182 3663 14385 28903 23175 23175 1 9606 Homo sapiens 0.0207109777804817 LAGPQLVQMFIGDGAK Oxidation (M) 1659.8654 0.86542736 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PM69;E9PKD5;E9PMD8;E9PN50 PSMC3 26S protease regulatory subunit 6A yes no 0 1 0 3 0 1 63.388 63.419 3 0.00025951 19863 20230619_1882_Aki_TMTPro18x_K_F3 84.62 72.454 43814 36301 42888 51792 45612 50399 50286 51329 48787 54112 56167 52893 57236 47777 52446 63557 55220 63147 40510 33356 43741 50990 47274 51078 50402 52454 50110 54483 57310 53613 58144 50294 53635 63555 52862 59952 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102050000 15183 4761 14386 28904 23176 23176 2904 1 9606 Homo sapiens 0.061889262514569054 LAGPQLVQMFIGDGAK Unmodified 1643.8705 0.87051274 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PM69;E9PKD5;E9PMD8;E9PN50 PSMC3 26S protease regulatory subunit 6A yes no 0 0 0 3.5 0.5 1 1 64.753 64.773 3 1.7848999999999997E-19 20426 20230619_1882_Aki_TMTPro18x_K_F3 158.31 141.56 64602 55899 59123 60349 57808 70265 71714 71178 73469 78970 68838 69645 93507 71689 71980 85632 77975 79481 59715 51211 60518 60743 60573 70323 71557 72841 74639 79104 71926 71203 93575 74660 73977 85449 74558 75551 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190880000 15184 4761 14386 28905;28906 23177;23178 23177 2 9606 Homo sapiens 0.07433230114088474 LAGTQPLEVLEAVQR Unmodified 1622.8992 0.89917033 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 7 0 1 62.411 62.447 3 2.0070999999999998E-19 18895 20230619_1887_Aki_TMTPro18x_K_F7 214.65 184.45 279800 189550 193040 296300 208060 230750 240150 251100 271780 290130 309670 272420 301440 289290 282080 342790 321050 313200 257780 174510 204160 289330 216050 238670 241310 256270 276650 290580 315330 278180 307230 300510 289670 341800 306750 297830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3413499999.9999995 15185 134 14387 28907 23179 23179 1 9606 Homo sapiens 0.11263671014876309 LAGVTALSCWLPLR Unmodified 1555.8545 0.85446874 890 A0A087X1K9;E5RGR0;Q6IAQ1;B4DJV9;O75608-2;O75608;E5RJ48 LYPLA1 Acyl-protein thioesterase 1 yes no 0 0 0 7.5 0.5 1 1 65.024 65.043 3 6.1056E-09 19969 20230619_1888_Aki_TMTPro18x_K_F8 160.52 138.47 19895 19290 16242 16313 17501 21220 19121 20104 25865 11454 11741 11492 11880 12264 14944 11342 12320 10246 18390 17631 16825 16804 18159 21069 19385 20378 25358 12072 12723 11699 12285 12565 14976 11367 11799 9751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91848000 15186 890 14388 28908;28909 23180;23181 23181 2 9606 Homo sapiens 0.09877568667843661 LAHALLHTQTK Unmodified 1231.7037 0.70370541 1761 A0A8I5KY07;A0A8I5KRP1;A0A8I5KRK1;A0A8I5KYQ0;A0A8I5KZB3;Q9H2M9;A0A8I5QJC9;A0A8I5KSQ5;A0A8I5KWJ9;B3KNG8 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 4 0 1 40.83 40.872 3 1.5822E-06 9935 20230619_1883_Aki_TMTPro18x_K_F4 157.38 133.61 80273 44939 78860 79036 90846 92251 91128 91237 110220 83185 103820 98653 99209 88649 92869 90194 114350 108230 74069 41478 80399 77149 93383 92220 92456 93062 110830 85026 106580 99144 101150 91856 95711 91639 109160 102630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50035000 15187 1761 14389 28910 23182 23182 1 9606 Homo sapiens 0.09712170071338733 LAHEDAECEK Unmodified 1200.5081 0.50810164 902 A0A090N7X1;A0A090N7Y2;Q9UG63;Q9UG63-2;C9JHK9;C9JZV3 ABCF2 ATP-binding cassette sub-family F member 2 yes no 0 0 0 1.5 0.5 1 1 34.956 34.984 3 0.0023335 7998 20230619_1880_Aki_TMTPro18x_K_F1 72.652 64.139 25208 13209 28459 31028 36820 40256 34136 37671 45892 25302 30771 32762 22656 22974 30249 13467 31567 27196 23282 12255 28782 29953 37518 39907 34931 38321 45407 26493 31951 32555 23775 23518 30601 14514 30160 25701 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77295000 15188 902 14390 28911;28912 23183 23183 1 9606 Homo sapiens -0.08413208235651837 LAHEVGWK Unmodified 938.4974 0.49740102 1419 A0A7I2V5L3;Q9BSQ6;Q53H34;A0A384ME37;M0QYS1;P40429;A0A7I2V2L9;Q5QTS3;Q8J015;Q0VGL3 RPL13A;RPL13a 60S ribosomal protein L13a yes no 0 0 0 7.5 0.5 1 1 45.196 45.253 3 0.00047891 11552 20230619_1888_Aki_TMTPro18x_K_F8 138.54 96.892 654030 230630 602740 613280 684050 635880 732640 702630 722330 731070 635790 540160 906290 625420 560960 698430 757270 620520 602220 215110 617730 587610 704360 642380 735490 713870 733750 731540 667300 560250 899120 647000 587980 696000 721710 590700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2905900000 15189 1419 14391 28913;28914 23184;23185 23185 2 9606 Homo sapiens 0.025692219629036117 LAHLGVQVK Unmodified 963.58655 0.58655038 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;F8WF32 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 3.5 0.5 1 1 45.503 45.563 3 0.00083143 12104 20230619_1882_Aki_TMTPro18x_K_F3 101.72 69.367 351180 224370 286720 328330 365700 422640 367330 406270 447850 338420 392500 381120 392830 320610 368760 389180 448910 439440 323790 206450 298100 324120 374080 419610 372760 414180 449110 347110 405250 383130 399790 336470 379920 392730 428670 416880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1199800000 15190 3384 14392 28915;28916 23186 23186 1 9606 Homo sapiens 0.10330056922418862 LAHYHVCCTR Unmodified 1315.5914 0.59139454 1643 A0A7I2SU25;Q6QNY7;Q6QNY6;Q6QNY5;Q9Y223-5;Q9Y223-3;Q9Y223;Q9Y223-2;Q9Y223-4 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes no 0 0 0 2 0 1 31.365 31.428 3 0.00034823 6253 20230619_1881_Aki_TMTPro18x_K_F2 110.38 96.175 8019.4 3073.4 9074.1 10557 11669 8286.9 9480 10326 9607.8 5879.6 8915.4 8036.7 8005.1 7567.9 7133.4 9479.7 12560 9055.9 7398.8 2882.3 9171.1 10002 11815 8595.3 9694.4 10294 9739.3 6249 9133.8 8061 8170.4 7916.8 7579.9 9464.9 11941 8618.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4935000 15191 1643 14393 28917 23187 23187 1 9606 Homo sapiens -0.05377750268780801 LAHYNKR Unmodified 900.49298 0.49298435 73;721;4226 U3KQK0;A0A024QZZ7;A0A024RCJ9;A0A024RCL8;B2R4S9;B4DR52;I6L9F7;Q5QNW6-2;Q99879;Q99877;Q5QNW6;P62807;P58876;O60814;Q93079;Q99880;A8K9J7;Q0D2M2;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q6DRA6;Q6DN03;Q8N257 HIST1H2BN;HIST1H2BD;HIST1H2BK;HIST1H2BI;HIST1H2BM;HIST2H2BF;HIST1H2BC;HIST1H2BH;HIST1H2BL;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST2H2BD;HIST2H2BC;HIST3H2BB Histone H2B;Histone H2B type 2-F;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-H;Histone H2B type 1-L;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Putative histone H2B type 2-D;Putative histone H2B type 2-C;Histone H2B type 3-B no no 0 0 1 4.5 0.5 1 1 30.738 30.809 3 0.05568 5867 20230619_1883_Aki_TMTPro18x_K_F4 55.604 26.877 36965 17405 49402 63532 121720 103760 89957 105170 62313 15042 24749 26675 18349 18215 32231 14249 22595 16871 34185 16327 50306 60774 119490 101840 91657 104850 63441 20408 26955 26331 19617 18837 31896 14595 21672 16017 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48248000 15192 73;721;4226 14394 28918;28919 23188 23188 1 9606 Homo sapiens 0.03875757539992719 LAIEAGFR Unmodified 875.4865 0.48650199 3794;3964 Q04828;A6NHU4;P17516;B4E0M1;B4DKT3;S4R3D5;Q2XPP3;S4R3Z2;A0A0A0MSS8;P42330 AKR1C1;AKR1C4;AKR1C3 Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C3 no no 0 0 0 7.5 0.5 1 1 51.711 51.786 2 0.01677 14375 20230619_1887_Aki_TMTPro18x_K_F7 91.9 27.097 240560 193910 214020 316150 385400 468610 794230 815150 980910 239860 305920 370710 327210 244250 315350 351910 338600 389600 222220 178490 223460 311290 398120 469530 781340 792890 958690 278050 347090 366600 332880 261900 322380 353860 324100 369450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 616020000 15193 3794;3964 14395 28920;28921 23189 23189 1 9606 Homo sapiens 0.04377819588626153 LAIEMEK Unmodified 832.43644 0.43644025 4802 yes no 0 0 0 4.25 0.829 1 1 2 51.806 51.866 3 0.0051263 14512 20230619_1885_Aki_TMTPro18x_K_F5 107.66 0 + 119430 100790 117210 106720 109030 137620 131240 127440 135670 149560 134410 150590 172360 127420 128130 171000 161680 142920 110430 92326 119100 107770 114610 136580 131200 131460 138060 149960 139710 152010 172500 134550 133150 169450 154240 136110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 383130000 15194 4802 14396 28922;28923;28924;28925 23190 23190 1 9606 Homo sapiens 0.01351948868443742 LAILYAK Unmodified 790.49528 0.49527576 1242 B4E0U6;A0A140VKA6;P50502;Q0IJ56;Q1XBU6;B7ZA40;H7C3I1;Q3KNR6;Q8IZP2;Q8NFI4;F6VDH7 ST13;ST13P4;ST13P5 Hsc70-interacting protein;Putative protein FAM10A4;Putative protein FAM10A5 yes no 0 0 0 4 0.816 1 1 1 58.754 58.784 3 0.020154 17789 20230619_1883_Aki_TMTPro18x_K_F4 76.592 47.019 255250 228200 226640 247700 258450 321880 278990 272880 321820 89441 89320 55017 60481 51833 184390 89938 79925 37638 235940 209050 233280 249560 266890 318650 281230 277270 315370 99638 101360 57638 68567 55528 179020 87160 77189 36458 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 376470000 15195 1242 14397 28926;28927;28928 23191;23192 23191 2 9606 Homo sapiens 0.09164793225079393 LAIWDTAGQER Unmodified 1258.6306 0.63060004 4557 Q9NP72;B7Z4P9;A0A804HIB9 RAB18 Ras-related protein Rab-18 yes no 0 0 0 5 0.816 1 1 1 54.899 54.951 2 2.9000000000000002E-30 15805 20230619_1885_Aki_TMTPro18x_K_F5 270.19 210.17 108730 92116 103890 108040 79579 106380 94950 103390 115220 125820 143420 135350 136660 113730 137780 147580 152030 164610 100530 84462 105600 107800 85187 107610 95573 106430 117360 126220 145480 136300 139730 119860 140930 148670 145410 156120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177130000 15196 4557 14398 28929;28930;28931 23193 23193 1 9606 Homo sapiens 0.01162996558082341 LALADAGDTVEDANFVEAMADAGILR Unmodified 2647.2799 0.27994619 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;A0A6I8PIP7;Q9P2J5-3;Q9HAM7;Q9NVC0 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 66.542 66.585 3 1.2748E-09 20820 20230619_1885_Aki_TMTPro18x_K_F5 119.02 111.21 899.74 2787 1515.5 2492.1 2863.1 3031.8 3098.2 4434.3 3983.2 4583.4 4180.3 4369.6 3115.5 2883.8 4093.7 2916.7 4507.4 5716.5 844.66 2542.9 1487.1 2550.2 2871.7 3058.8 3138.2 4430.3 4018.4 4612.5 4235.8 4389.8 3262 3030 4162.1 3089.8 4317 5395.5 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20547000 15197 1603 14399 28932;28933 23194 23194 1 9606 Homo sapiens 0.02219741905128103 LALASLGYEK Unmodified 1063.5914 0.59136099 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;A0A3B3IT07;Q8WUM4-3 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 1.5 0.5 2 2 58.894 58.901 2;3 0.00014096 18179 20230619_1881_Aki_TMTPro18x_K_F2 105.98 89.035 73712 65891 67264 75818 72615 84114 81023 79278 88464 61190 58038 53723 58224 47336 78896 63990 67262 60390 68150 60393 69007 75867 75274 84315 81413 80851 88416 62631 61016 54706 60394 49934 79135 63883 64420 57422 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85078000 15198 3981 14400 28934;28935;28936;28937 23195;23196 23196 2 9606 Homo sapiens 0.062108962745242025 LALDMEIHAYR Unmodified 1330.6704 0.67035637 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;B4DFR3 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 6 0 1 52.645 52.722 3 0.0001368 15069 20230619_1886_Aki_TMTPro18x_K_F6 113.22 92.798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15199 1428 14401 28938 23197 23197 1 9606 Homo sapiens 0.01824800237159252 LALDMEISAYR Oxidation (M) 1296.6384 0.63838754 3482 P20700;E9PBF6;B4DZT3 LMNB1 Lamin-B1 yes no 0 1 0 5 0 1 54.963 55.03 2 0.00023996 15848 20230619_1885_Aki_TMTPro18x_K_F5 120.76 99.463 141990 114120 111780 148520 130050 151970 125040 119170 131130 184290 210260 215730 206580 190600 164890 232600 205800 270580 131050 104760 116550 147110 133640 152660 126630 125830 136590 183660 211820 216750 209060 199630 171070 234960 196960 256360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91033000 15200 3482 14402 28939 23198 23198 2129 1 9606 Homo sapiens 0.0019338776335189323 LALDYGIK Unmodified 891.50657 0.50656873 452 A0A024R7I3;P61006;P61006-2 RAB8A Ras-related protein Rab-8A yes no 0 0 0 8 0 1 56.876 56.933 2 0.071306 16537 20230619_1888_Aki_TMTPro18x_K_F8 75.738 0 328870 283940 297590 341780 292400 333860 343670 346070 362720 406700 374460 407270 419630 357280 362380 453640 378440 466290 303970 260400 305120 340320 305630 338510 344200 354350 369260 407660 385840 411650 424120 375330 370930 454730 362540 442430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102100000 15201 452 14403 28940 23199 23199 1 9606 Homo sapiens 0.05647570528572032 LALEGVEK Unmodified 857.48583 0.48583328 702 A0A024RC33;Q15555-4;Q15555-5;Q15555-3;Q15555 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes no 0 0 0 5 0 1 51.436 51.511 2 0.0022785 14399 20230619_1885_Aki_TMTPro18x_K_F5 117.04 48.614 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15202 702 14404 28941 23200 23200 1 9606 Homo sapiens 0.05138980148910832 LALFGEHVGALR Unmodified 1281.7194 0.71935547 4457 Q9BWH6;Q9BWH6-2;Q9BWH6-3 RPAP1 RNA polymerase II-associated protein 1 yes no 0 0 0 2 0 1 54.745 54.769 3 2.8615E-18 16491 20230619_1881_Aki_TMTPro18x_K_F2 261.35 198.05 26457 24292 27400 27282 25282 31019 29215 32634 34440 27750 30690 30757 33260 30722 32752 36749 33280 32860 24490 22258 27727 27370 26561 31115 29403 33085 34618 28410 31784 31112 33859 31991 33365 36607 31834 31253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69151000 15203 4457 14405 28942 23201 23201 1 9606 Homo sapiens 0.0897645658840247 LALFNPDVCWDR Unmodified 1504.7133 0.71328381 600 A0A024R9Z0;O00483 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes no 0 0 0 7.5 0.5 1 1 63.144 63.171 2 2.0223E-13 19176 20230619_1888_Aki_TMTPro18x_K_F8 215.72 179.02 319940 260100 263270 321510 296040 279610 353700 350910 336430 263210 288670 276530 280290 286380 284390 309920 343720 353080 295390 238640 272980 319130 306090 287670 352690 351320 341540 271170 298080 280690 286960 296200 292530 313410 328360 334870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 606620000 15204 600 14406 28943;28944 23202 23202 1 9606 Homo sapiens -0.0188842970544556 LALGGCTNRPFYR Unmodified 1523.7667 0.76671637 1962 A6ND22;Q9Y3D3-2;Q9Y3D3 MRPS16 28S ribosomal protein S16, mitochondrial yes no 0 0 1 7.5 0.5 1 1 46.019 46.082 3 1.7474E-06 11904 20230619_1888_Aki_TMTPro18x_K_F8 140.91 90.698 95756 83226 99363 113840 114780 125190 114570 102890 113120 106500 82135 89525 97267 78873 95947 120810 114580 84216 88605 76424 100960 112540 117950 125210 115460 106800 114180 106950 86482 91305 98752 83901 98742 118620 109240 80488 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150980000 15205 1962 14407 28945;28946 23203 23203 1 9606 Homo sapiens 0.025783677970821373 LALGIPLPELR Unmodified 1190.7387 0.73869393 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 3 0 1 63.663 63.694 2 0.058613 19994 20230619_1882_Aki_TMTPro18x_K_F3 63.216 30.095 266160 252110 353120 345000 275470 325630 311750 303360 353240 363960 310190 317440 315160 313020 329490 382560 346300 388740 247020 231440 350260 340510 293210 330160 313690 313180 356030 363210 320650 324190 322540 326580 336040 383500 331470 369000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126090000 15206 2980 14408 28947 23204 23204 1 9606 Homo sapiens 0.15095412879304604 LALHELK Unmodified 822.49634 0.49633839 4173 Q7Z4Y4;Q9UIJ7;Q7Z531;B3KWD9;Q9UIJ7-2 AK3 GTP:AMP phosphotransferase AK3, mitochondrial yes no 0 0 0 8 0 1 45.257 45.285 3 0.0026899 11590 20230619_1888_Aki_TMTPro18x_K_F8 119.21 26.287 136620 111810 117250 120360 175750 180470 179520 170110 204610 105030 120580 113620 115290 101410 145270 132010 136730 108190 126180 102450 121640 121690 177970 177740 181400 172720 203340 110090 127470 114700 119330 106560 146640 130890 130710 103120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219990000 15207 4173 14409 28948 23205 23205 1 9606 Homo sapiens 0.07799007593996521 LALHNFG Unmodified 770.40752 0.40752338 418 A0A024R6Y2;P61970;A0A8V8TRD3 NUTF2 Nuclear transport factor 2 yes no 0 0 0 4.5 3.5 1 1 48.291 48.324 2 0.014193 12814 20230619_1888_Aki_TMTPro18x_K_F8 112.95 88.132 636840 573630 597020 623670 585690 717030 648710 622950 788020 550830 598680 494180 503360 435540 619090 711960 643700 503330 588930 525480 609850 627130 611800 715830 654650 641090 786440 559390 618510 503230 522510 465490 629350 699070 614680 480790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2009799999.9999998 15208 418 14410 28949;28950 23206;23207 23207 2 9606 Homo sapiens 0.01313592354335924 LALHSGMDYAIMTGGDVAPMGR Oxidation (M) 2278.0544 0.054443471 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q5T9A4;Q5T9A4-3;A0A5K1VW56;Q9H834;Q5SV16;Q8N3E6;Q5T2N8 ATAD3A;ATAD3B;DKFZp761L1023;ATAD3C ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3C yes no 0 1 0 8 0 1 55.845 55.907 3 0.0068349 16117 20230619_1888_Aki_TMTPro18x_K_F8 54.834 46.613 24501 21717 24298 27556 28214 31996 27455 27920 33861 27493 31724 28171 32914 23591 31696 32983 31439 33864 22666 19925 24779 27399 28993 31920 27926 28793 34028 27844 32679 28441 33466 25006 32246 33037 30100 32146 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22374000 15209 4603 14411 28951 23208 23208 2822 1 9606 Homo sapiens -0.033461572996657196 LALLEEAR Unmodified 913.52328 0.52328142 1561 A0A4D6DSY5;A1L0S9;A1L0S8;B1AKD8;Q5TZA2-2;Q5TZA2 CROCC Rootletin yes no 0 0 0 4 0.816 1 1 1 53.747 53.793 2 0.002466 15695 20230619_1883_Aki_TMTPro18x_K_F4 126.28 0 351830 252560 291080 362040 364410 419280 394590 379580 419680 435370 409140 406180 458290 358510 389500 503920 447420 452640 324610 232220 302340 357140 373780 418570 396780 392010 425990 436120 422390 412200 462750 379180 401110 500830 427570 430440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 628340000 15210 1561 14412 28952;28953;28954 23209 23209 1 9606 Homo sapiens 0.06306071414519465 LALLHEGTGPR Unmodified 1162.6459 0.64585618 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 7.5 0.5 1 1 43.69 43.735 3 4.7133E-17 10954 20230619_1888_Aki_TMTPro18x_K_F8 220.17 169.7 138750 101110 126150 127930 122840 142850 149550 194700 250580 139350 140740 133820 148720 109740 135650 165240 138280 147260 128110 92830 129180 127270 128860 144440 152350 193650 244790 143770 149830 135440 150850 116990 138480 164060 132350 140030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 506670000 15211 4191 14413 28955;28956 23210;23211 23211 2 9606 Homo sapiens 0.071039081459503 LALLQVR Unmodified 811.52797 0.52797287 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J758;A0A994J4Q0;A0A994J428;A0A994J4Q4;A8K4Q9;B3KT70;Q2TB90;B4E0J9 HK1;HKDC1 Hexokinase-1;Hexokinase;Putative hexokinase HKDC1 yes no 0 0 0 4.5 0.5 1 1 55.006 55.045 2 0.033032 15872 20230619_1885_Aki_TMTPro18x_K_F5 93.885 8.8239 232500 226190 220750 222110 341030 510490 388170 397680 612930 87170 68252 84459 93751 72212 140970 103150 93974 81904 215150 206970 227340 228450 347470 491290 394880 405420 588210 105810 96970 85710 97327 76531 139710 102100 90284 78062 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94490000 15212 43 14414 28957;28958 23212 23212 1 9606 Homo sapiens 0.11467000347943213 LALPADIR Unmodified 867.5178 0.51780212 2127 A8K8X0;Q14CX7-2;Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes no 0 0 0 7.5 0.5 1 1 52.276 52.352 2 0.0085142 14667 20230619_1887_Aki_TMTPro18x_K_F7 104.45 18.361 152990 127600 139940 139960 137130 177510 146850 153310 209590 163540 151210 147670 172180 133360 151040 176790 169130 161490 141390 116930 143230 140870 143280 176060 149440 158520 207560 164380 158760 150190 174010 140400 155100 176030 161600 153580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127480000 15213 2127 14415 28959;28960 23213;23214 23213 2 9606 Homo sapiens 0.07874392622704818 LALPADSVNIK Unmodified 1139.655 0.65502388 4313 Q93034 CUL5 Cullin-5 yes yes 0 0 0 8 0 1 57.016 57.068 3 0.035231 16586 20230619_1888_Aki_TMTPro18x_K_F8 50.284 35.766 75711 64961 77758 85050 75807 81557 79601 81780 96337 92133 88148 86911 97054 81131 90282 109530 90571 92242 70045 59626 78826 84186 78996 82746 80583 83818 96898 92412 91212 88314 98442 85366 92049 108590 86666 87789 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 286000000 15214 4313 14416 28961 23215 23215 1 9606 Homo sapiens 0.09078256711586619 LALPGFSTPR Unmodified 1057.592 0.59202969 935 A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBF7;H0YBM4 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 4.5 0.5 1 1 57.728 57.759 2 0.090547 17044 20230619_1885_Aki_TMTPro18x_K_F5 58.596 14.247 44989 37705 35095 46200 34564 37279 37197 38760 43235 39841 46727 39707 43436 40107 48633 44442 44884 54299 41531 34588 36526 45833 36042 38418 37555 39545 43822 40212 47600 40368 44696 41595 49136 45153 43046 51434 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39559000 15215 935 14417 28962;28963 23216 23216 1 9606 Homo sapiens 0.06553735714237519 LALPGHAESYNPPPEYLLSEEER Unmodified 2610.2602 0.26019703 2320 B2RDN4;Q14137;A8K3R2;B4DEN9;Q14137-2;Q4G0D9;Q6DKJ9 BOP1 Ribosome biogenesis protein BOP1 yes no 0 0 0 4 1 1 1 57.387 57.433 3 1.5806E-13 16831 20230619_1885_Aki_TMTPro18x_K_F5 137.12 128.62 33438 28851 28757 32578 28295 37937 33731 37758 38727 40465 36912 36748 36866 32842 35567 41279 41173 43711 30894 26443 29627 32671 29642 37939 33861 38637 39117 40629 37957 37343 37583 34456 36532 41463 39358 41482 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53419000 15216 2320 14418 28964;28965 23217;23218 23218 2 9606 Homo sapiens 0.019477339566947194 LALPQSDASLLSR Unmodified 1369.7565 0.75652884 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;Q6P664 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 4.5 3.5 1 1 57.243 57.269 2 0.0021951 17363 20230619_1880_Aki_TMTPro18x_K_F1 110.39 74.507 86325 64530 76723 99125 87644 96185 89924 86709 97649 111930 104580 105140 115490 94077 95974 121200 112850 118820 79706 59371 79034 97140 90253 97240 90781 89945 99431 111550 107440 106670 116580 98871 99009 121150 107850 112860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 121650000 15217 2332 14419 28966;28967 23219;23220 23219 2 9606 Homo sapiens 0.08644083343506281 LALQALTEK Unmodified 985.5808 0.5807963 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 3.67 3.09 1 1 1 58.266 58.287 2 8.8877E-06 17085 20230619_1888_Aki_TMTPro18x_K_F8 182.98 130.58 184630 153090 158860 170620 185020 215420 202030 213200 232240 213840 231230 236560 224740 199770 250490 233780 239160 254240 170540 140310 164010 171510 190750 214380 203660 217900 234790 216780 237120 237880 230850 209060 253550 235590 229040 241200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 984400000 15218 673 14420 28968;28969;28970 23221;23222 23222 2 9606 Homo sapiens 0.08742913620085346 LALQLHPDRNPDDPQAQEK Unmodified 2184.0923 0.092343841 4656 Q9UBS4;A0A7P0T9E8 DNAJB11 DnaJ homolog subfamily B member 11 yes no 0 0 1 4.5 0.5 1 1 44.546 44.608 4 4.1835E-15 11484 20230619_1885_Aki_TMTPro18x_K_F5 167.97 151.83 242780 189360 220060 224030 207420 250640 235830 232200 272570 292510 300850 332700 337120 278440 270620 384590 363470 360100 224250 173690 225290 223790 217480 250990 237350 240130 276870 293580 309090 334120 339790 294580 282110 383040 346850 342290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 344440000 15219 4656 14421 28971;28972 23223;23224;23225 23225 3 9606 Homo sapiens 0.04766136273292432 LALSDFEK Unmodified 921.48075 0.48074791 3620 P50748;E7ES84;B4E0D8 KNTC1 Kinetochore-associated protein 1 yes no 0 0 0 6 0 1 58.004 58.072 3 0.0024646 17341 20230619_1886_Aki_TMTPro18x_K_F6 103.83 51.979 19589 16052 17984 17315 15945 20599 19914 19160 22485 21360 23012 26138 27906 23350 21203 31357 25015 25902 18101 14709 18372 17435 16859 20546 19931 19734 22782 21619 23816 26232 28008 24589 21946 31048 23904 24656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15788000 15220 3620 14422 28973 23226 23226 1 9606 Homo sapiens 0.01686676286283273 LALSEDTEPSSSESR Unmodified 1606.7322 0.73222416 2166 A8MVW0 FAM171A2 Protein FAM171A2 yes yes 0 0 0 1 0 1 44.258 44.258 2 0.0019285 11984 20230619_1880_Aki_TMTPro18x_K_F1 110.08 92.641 29860 22120 26080 29049 37319 35690 33494 31242 25643 34841 37882 25153 30849 22471 37898 25884 24805 16272 27566 20315 26989 28844 37713 35496 33756 32317 27096 34704 37918 25913 31989 23460 37622 25467 23801 15588 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12178000 15221 2166 14423 28974 23227 23227 1 9606 Homo sapiens -0.04687266391351841 LALSQNQQSSGAAGPTGK Unmodified 1713.8646 0.86457574 3127 Q86Y74;J3KPP4;O95232;Q6PKC2;A8K3C5;D6RDI2;B4DJ96 CROP;LUC7L3 Luc7-like protein 3 yes no 0 0 0 1 0 1 45.191 45.191 3 9.8281E-24 12355 20230619_1880_Aki_TMTPro18x_K_F1 197.38 178.84 177240 147830 170840 184970 185540 237930 193360 192860 256440 215710 234380 222200 244310 210080 195280 284960 266770 226420 163860 135640 174430 184390 192160 235440 196440 200740 256680 217140 241790 225080 246810 220950 203870 281630 254270 215820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 326100000 15222 3127 14424 28975 23228;23229 23228 2 9606 Homo sapiens 0.03619803136120936 LALVTGGEIASTFDHPELVK Unmodified 2096.1154 0.11537069 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 7.5 0.5 2 2 62.677 62.707 3;4 5.854200000000001E-45 19018 20230619_1887_Aki_TMTPro18x_K_F7 251.7 213.69 2116700 1727900 1914200 2092300 1794700 2042000 1987600 2038700 1870900 2244400 2211700 2260500 2285300 2031800 2065800 2331900 2319100 2664800 1955700 1585000 1960600 2082600 1879200 2068800 1990600 2088800 1928200 2256700 2256900 2286100 2320200 2119600 2120100 2356300 2218900 2526300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3491999999.9999995 15223 3756 14425 28976;28977;28978;28979 23230;23231 23230 2 9606 Homo sapiens 0.11115762338067725 LAMLEEDLLALK Unmodified 1357.7527 0.75268901 1183 A0A140VJL0;Q6NVY1;Q6NVY1-2;F8W8A6 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes no 0 0 0 7 0 1 66.468 66.491 3 0.0014126 20702 20230619_1887_Aki_TMTPro18x_K_F7 93.058 79.094 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15224 1183 14426 28980 23232 23232 1 9606 Homo sapiens 0.08812277525453283 LAMQEFMILPVGAANFR 2 Oxidation (M) 1938.9696 0.96957485 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2;K7EM90;A4UCS8 ENO1 Alpha-enolase;Enolase yes no 0 2 0 3.33 0.471 2 1 62.88 62.902 3 1.0639E-07 19566 20230619_1882_Aki_TMTPro18x_K_F3 120.54 109.77 60418 51093 47259 58245 57926 54149 59633 62000 62737 63510 63908 59095 63029 54896 65981 70656 66631 75834 55778 46835 49317 58192 59321 55288 60129 62835 63807 63955 65462 60089 64505 57612 67108 71021 63810 71939 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 869190000 15225 293 14427 28981;28982;28983 23233;23234;23235 23233 176;177 3 9606 Homo sapiens 0.03764885016721564 LAMQEFMILPVGAANFR Oxidation (M) 1922.9747 0.97466023 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2;K7EM90;A4UCS8 ENO1 Alpha-enolase;Enolase yes no 0 1 0 3 0.816 1 1 1 63.804 63.82 3 1.4152E-18 20038 20230619_1882_Aki_TMTPro18x_K_F3 179.55 150.92 143580 122030 151390 165270 166940 137500 161410 158360 177040 177210 192570 176410 186450 156160 171260 209680 202540 214470 132860 112060 153390 162990 171620 141750 163600 160900 180130 178030 196460 178570 189770 164610 176360 209990 193570 203610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2100399999.9999998 15226 293 14427 28984;28985;28986 23236;23237 23236 176;177 2 9606 Homo sapiens 0.05009188879307658 LAMQEFMILPVGAANFR Unmodified 1906.9797 0.97974561 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2;K7EM90;A4UCS8 ENO1 Alpha-enolase;Enolase yes no 0 0 0 5 1.41 1 1 1 1 1 65.383 65.415 3 1.2737E-23 20309 20230619_1885_Aki_TMTPro18x_K_F5 204.17 185.5 119170 89572 105160 111650 75120 101850 112070 118450 105970 152070 136940 128500 149750 131690 132110 157760 154850 164420 110030 82216 107610 110850 81542 104070 110760 120730 109740 151060 139550 131650 151630 137150 136040 158410 148000 156060 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3500199999.9999995 15227 293 14427 28987;28988;28989;28990;28991 23238;23239;23240 23240 3 9606 Homo sapiens 0.06253492741939226 LAMQEFMILPVGAESFR Unmodified 1937.9743 0.97432588 3418 Q6FHV6;P09104;A8K3B0;P09104-2 ENO2 Gamma-enolase yes no 0 0 0 2 0 1 65.453 65.46 3 0.0003285 20997 20230619_1881_Aki_TMTPro18x_K_F2 76.761 60.622 53612 44594 55065 57161 34986 54231 50613 48604 55288 64849 67614 59787 67893 59348 60068 66631 68008 62099 49590 40927 55543 56652 38468 54895 50310 50498 56576 64511 68746 60931 68919 61612 61691 66578 64952 59052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80219000 15228 3418 14428 28992 23241 23241 1 9606 Homo sapiens 0.04285769159469055 LANEERDAENPDEPK Unmodified 1725.7806 0.78057134 1761 A0A8I5KY07;A0A8I5KRP1;A0A8I5KRK1;A0A8I5KYQ0;A0A8I5KZB3;Q9H2M9;A0A8I5QJC9;A0A8I5KSQ5;A0A8I5KWJ9;B3KNG8 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 1 1 0 1 39.167 39.167 3 1.2395E-13 9710 20230619_1880_Aki_TMTPro18x_K_F1 165.49 136.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15229 1761 14429 28993 23242 23242 1 9606 Homo sapiens -0.05328772751431643 LANIDEEMLQK Unmodified 1302.649 0.64895222 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0 1 58.759 58.815 3 0.00021355 17440 20230619_1885_Aki_TMTPro18x_K_F5 110.08 74.425 131140 109090 131410 126400 114100 128960 129760 123630 155590 125750 125870 122060 142830 113280 139360 149760 139120 145540 121270 100020 133170 126310 120360 130110 130740 126770 155800 126930 131280 123860 145030 119120 141820 149640 133160 138260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51623000 15230 3650 14430 28994 23243;23244 23244 2 9606 Homo sapiens 0.00973370417773367 LANIDEEMLQK Oxidation (M) 1318.6439 0.64386684 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 1 0 6 0 1 48.929 49.006 3 0.037822 13437 20230619_1886_Aki_TMTPro18x_K_F6 45.879 19.206 297750 151880 270950 306020 242450 258490 295110 288740 309760 366470 360350 347030 414080 322720 330970 421290 361150 347730 274470 140550 277240 295510 255460 265480 295070 295060 317070 365470 369540 352490 416720 338950 340180 417420 345160 331100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1032799999.9999999 15231 3650 14430 28995 23245 23245 2345 1 9606 Homo sapiens -0.002709334448354639 LANILFTQELAR Unmodified 1387.7823 0.78234966 1120 A0A0S2Z583;Q8TC12;A0A0S2Z575;Q8TC12-2;H0YJ46;G3V2G6;G3V234;B3KQ19;H0YIZ8 RDH11 Retinol dehydrogenase 11 yes no 0 0 0 3 0 1 63.208 63.238 2 1.9678E-09 19768 20230619_1882_Aki_TMTPro18x_K_F3 183.08 142.05 86277 72642 83544 96090 83852 95840 99900 94908 108210 80894 86816 86500 87377 75507 102210 99045 99646 91315 79772 66688 85187 95088 87529 96888 100030 96691 108820 82721 90154 87244 89887 79472 103510 98736 95308 86844 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 348240000 15232 1120 14431 28996 23246 23246 1 9606 Homo sapiens 0.10396977585787681 LANILFTR Unmodified 946.56 0.56000128 4006 Q53RX3;Q9HBH5 RDH14 Retinol dehydrogenase 14 yes no 0 0 0 6 0 1 61.186 61.241 2 0.058645 18661 20230619_1886_Aki_TMTPro18x_K_F6 69.812 55.143 77869 63127 66612 71615 67384 79072 77977 87501 97491 57757 52190 42080 52970 44837 72744 62526 54700 52001 71913 57872 68653 71756 70310 79576 78603 87971 96290 59553 55694 43613 54983 47098 72571 61994 52492 49513 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33684000 15233 4006 14432 28997 23247 23247 1 9606 Homo sapiens 0.08458368031097052 LANLPEEVIQK Unmodified 1252.7027 0.70270235 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;A0A8V8TQW9;A0A8V8TPJ4;Q6LAI4 MSH6 DNA mismatch repair protein Msh6 yes no 0 0 0 6 0.816 1 1 1 59.769 59.822 3 2.463E-09 18044 20230619_1886_Aki_TMTPro18x_K_F6 146.79 118.28 136740 100300 127820 118360 111870 139880 122460 111470 143890 136690 144370 129150 143720 114190 124070 154250 147490 147690 126290 92019 130290 118360 117930 139150 123560 116550 145380 136620 147950 131030 145740 120440 127970 153900 140900 140350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 367080000 15234 1853 14433 28998;28999;29000 23248;23249 23248 2 9606 Homo sapiens 0.08645910911786814 LANQAADYFGDAFK Unmodified 1529.7151 0.71505795 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B4DHD2;A0A3B3IT07;Q8WUM4-3;F8WDK9 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 7.5 0.5 1 1 62.425 62.456 3 1.5501E-06 18913 20230619_1887_Aki_TMTPro18x_K_F7 121.18 98.817 179190 161710 179160 180650 162610 179590 190310 188740 222800 213380 201370 215260 239430 194900 214300 241330 227530 235090 165800 148180 181760 180960 170980 181950 191320 192860 224350 214400 209390 217740 241920 204210 219240 241350 217620 223330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 299700000 15235 3981 14434 29001;29002 23250;23251 23250 2 9606 Homo sapiens -0.028610974158254976 LANTAPAW Unmodified 842.42865 0.42865276 3016 Q12824;Q12824-2;G5E975;Q9H836;A0A0G2JRV3 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes no 0 0 0 7 0 1 57.758 57.81 2 0.03054 16920 20230619_1887_Aki_TMTPro18x_K_F7 79.597 69.183 36648 37707 34565 34974 40381 46269 40096 36522 45972 27123 27576 32723 36225 29604 34297 31626 31645 32336 33926 34482 35378 35716 41500 45727 40607 37746 45725 28133 29583 32855 36602 30749 34747 31802 30308 30702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9020700 15236 3016 14435 29003 23252 23252 1 9606 Homo sapiens 0.001135576631781987 LAPALATGNTVVMK Unmodified 1384.7748 0.77482144 1437 A0A384MTJ7;P30837 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes no 0 0 0 3 0 1 57.103 57.136 3 1.4677E-07 17250 20230619_1882_Aki_TMTPro18x_K_F3 105 87.27 52582 38558 52238 58033 50779 58116 48943 54697 74667 61182 64687 68041 70189 57171 72471 74430 65584 73238 48587 35469 53100 56979 52880 58658 50274 56289 74182 61725 67110 68405 71547 60250 73288 74447 62870 69546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76511000 15237 1437 14436 29004 23253 23253 1 9606 Homo sapiens 0.09782501993822734 LAPALPAWPHR Unmodified 1227.6877 0.68766141 2309 B2RD09;Q96P11-2;Q96P11;Q96P11-4;Q96P11-5 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes no 0 0 0 5 0 1 52.634 52.706 3 5.5501E-05 14903 20230619_1885_Aki_TMTPro18x_K_F5 98.055 70.573 21083 19533 21154 22475 22664 27720 25418 25355 32928 26986 25321 24079 27471 24767 26068 27572 24601 28541 19511 17901 21520 22527 23527 27574 25693 26103 32807 27117 26424 24605 27912 25674 26462 27714 23579 27084 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18437000 15238 2309 14437 29005 23254 23254 1 9606 Homo sapiens 0.08292508625095252 LAPAQYIR Unmodified 930.5287 0.52870115 3859 Q6I9S2;Q13573;G3V3A4;G3V4X8;B7Z9X2;B4DY36;A0A024R6E3;Q6P151;Q0D2M5 SNW1 SNW domain-containing protein 1 yes no 0 0 0 2.5 0.5 1 1 46.762 46.84 2 0.043573 12976 20230619_1881_Aki_TMTPro18x_K_F2 71.949 44.987 151970 130560 139640 147010 200590 257100 191420 190260 297690 107990 113150 118630 117010 91843 132640 112430 141540 119870 140470 119650 143900 148520 203800 249970 196580 196710 289290 114320 125010 119100 120110 96752 134970 113130 135190 113850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62504000 15239 3859 14438 29006;29007 23255 23255 1 9606 Homo sapiens 0.06065794996993645 LAPASNMTSQRPVSSTGINFDNPSVQK Unmodified 2845.4029 0.4028553 4550 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 yes yes 0 0 1 3 0 1 52.546 52.605 4 4.6335E-09 15298 20230619_1882_Aki_TMTPro18x_K_F3 116.72 94.482 40118 35142 34709 35032 40718 49298 41553 43515 51101 49290 44734 45180 58986 43826 47579 60628 60372 55855 37071 32172 35807 35595 41904 48640 42142 44982 51298 49394 46818 46030 59182 46170 49356 60346 57608 53119 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114740000 15240 4550 14439 29008 23256 23256 1 9606 Homo sapiens 0.053969983562637935 LAPDFDK Unmodified 804.40177 0.4017693 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;O60313-11;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;A0A2R8YD53;A0A2R8YGE5;A0A2R8Y4Q3;A0A2R8YE54;A0A2R8Y4G4;A0A2R8Y5G3;A0A2R8Y5E2;C9JY58;H7C321 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 4 0 1 51.255 51.282 2 0.037427 14447 20230619_1883_Aki_TMTPro18x_K_F4 91.9 37.375 90755 74703 97788 97757 136750 131260 141120 131000 156830 115900 148010 135360 136100 119330 129730 148660 151000 167580 83976 68578 99343 97274 138890 130210 142450 133440 158350 118610 151670 136130 139030 125180 133320 149910 144380 158910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1112500000 15241 2865 14440 29009 23257 23257 1 9606 Homo sapiens -0.008255509480022738 LAPDYDALDVANK Unmodified 1403.6933 0.69325988 3724 P62750;H7BY10;K7EJV9;K7ERT8;A8MUS3;K7EMA7;B9EJE3 RPL23A;RPL23AL 60S ribosomal protein L23a yes no 0 0 0 3.43 1.4 1 1 1 2 2 57.989 58.013 2;3 4.5328E-11 17031 20230619_1885_Aki_TMTPro18x_K_F5 181.87 132.53 456070 401090 436890 484570 429400 535110 511730 505460 529830 593620 529180 537330 659560 516830 510340 700080 605990 648400 421770 367820 445690 483160 449270 536480 511810 520760 539300 593420 548660 547530 661700 543710 527920 697080 579180 616240 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3342999999.9999995 15242 3724 14441 29010;29011;29012;29013;29014;29015;29016 23258;23259;23260;23261 23260 4 9606 Homo sapiens 0.007560978355968473 LAPEFAK Unmodified 774.42759 0.42759012 3527 V9HWC7;P30041;B4DUK1 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 0 7 0.816 2 2 2 50.755 50.832 2;3 0.0060484 13936 20230619_1887_Aki_TMTPro18x_K_F7 97.068 38.49 4935300 3776700 4011100 4864500 5807600 6472100 6060900 5735600 6824300 6715000 7208400 8085800 7557200 6507600 6825500 8221300 8996000 8387800 4554600 3467500 4184800 4842200 5900100 6404800 6117100 5936500 6925400 6775900 7398900 8091500 7670200 6854100 7080600 8239300 8582100 7967300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4211399999.9999995 15243 3527 14442 29017;29018;29019;29020;29021;29022 23262;23263;23264;23265 23263 4 9606 Homo sapiens 0.031353432942864856 LAPGGHVGR Unmodified 862.47733 0.47733428 3558 Q59GY2;P36578;B4DMJ6;H3BM89;B4DMJ2;Q53G74 RPL4 60S ribosomal protein L4 yes no 0 0 0 5.33 3.09 1 1 1 30.286 30.325 2 0.011572 6146 20230619_1880_Aki_TMTPro18x_K_F1 82.305 65.75 58566 30636 51935 46631 65155 61415 61797 58052 68506 52474 40801 38378 76060 37084 29895 44244 86417 67291 53982 28233 53463 45969 66477 60908 62683 59374 68340 52938 44639 39555 74200 38869 34388 45575 82004 63740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 71056000 15244 3558 14443 29023;29024;29025 23266;23267 23266 2 9606 Homo sapiens 0.040594710229470365 LAPITSDPTEATAVGAVEASFK Unmodified 2174.1107 0.11067925 3451 V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7;Q9UKK4;Q9UK31 HEL-S-30;PKM;PKM2 Pyruvate kinase;Pyruvate kinase PKM yes no 0 0 0 3.5 0.5 1 1 63.471 63.489 3 7.610100000000001E-31 19895 20230619_1882_Aki_TMTPro18x_K_F3 208.17 194.94 51947 41342 47254 46642 45405 52318 52111 49225 55649 62482 64165 60990 67022 52821 58205 67806 64278 75939 47990 37902 48364 46762 47515 52412 52275 50859 56866 62379 65531 61721 67862 55589 59735 68318 61523 71998 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 149680000 15245 3451 14444 29026;29027 23268;23269 23268 2 9606 Homo sapiens 0.07058833404653342 LAPNEFPHK Unmodified 1051.5451 0.5450795 4378 Q96L92-3;Q96L92;A0A2R8Y8A7;A0A5H1ZRP6;Q96L92-2;A0A2R8Y3S6 SNX27 Sorting nexin-27 yes no 0 0 0 7.5 0.5 1 1 45.481 45.538 3 0.0041807 11519 20230619_1887_Aki_TMTPro18x_K_F7 69.979 34.755 94616 69502 78952 91777 92601 96555 96007 100390 125180 98954 105560 111570 116800 92832 98730 140890 134970 131020 87313 63838 81781 90902 95239 97364 97492 102250 125020 100510 109740 112140 118000 98923 102950 140120 128760 124560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101050000 15246 4378 14445 29028;29029 23270 23270 1 9606 Homo sapiens 0.021368761630810695 LAPPLVTLLSAEPELQYVALR Unmodified 2292.3093 0.30931947 3819 Q10567-4;Q10567-3;Q10567-2;Q10567;C9J1E7 AP1B1 AP-1 complex subunit beta-1 yes no 0 0 0 2.5 0.5 1 1 67.292 67.315 3 7.0715E-09 21707 20230619_1881_Aki_TMTPro18x_K_F2 119.23 107.62 1929.8 1836.7 833.34 1511.8 1389.2 1618.8 1762.3 1720.4 2082.3 1755.7 2062.7 1663.1 1622.1 1935.3 1384.6 1143.4 909.49 1397.7 1777.8 1678.6 950.68 1555.8 1412.9 1632.6 1763.5 1751.4 2100.2 1770.8 2094.7 1701.5 1660.8 1943.5 1384.9 1177.6 878.16 1323.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3998700 15247 3819 14446 29030;29031 23271 23271 1 9606 Homo sapiens 0.2148571877419272 LAPPLVTLLSGEPEVQYVALR Unmodified 2264.278 0.27801935 1172 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087X253;B4DWG4;B4E261;A0A087WZQ6;A0A087WU93;A0A087WYD1 AP2B1;DKFZp781K0743 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 2.5 0.5 1 1 66.236 66.257 3 1.0708000000000001E-30 21281 20230619_1881_Aki_TMTPro18x_K_F2 215.45 205.39 4353.4 4531.3 3198.2 3691.8 3217.5 4487.9 3750.1 4509.9 4230 5244.7 5450.5 3696.9 3436.9 4296.3 3420.2 5027.2 4908.4 5650.3 4023.5 4139.9 3349.2 3812.2 3365.8 4480.1 3768.2 4620.9 4332.5 5212.6 5433.7 3850.2 3581.3 4447.5 3569.9 5069.6 4687 5357.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26744000 15248 1172 14447 29032;29033 23272 23272 1 9606 Homo sapiens 0.19645145740059888 LAPSEYR Unmodified 834.42357 0.42356738 1425 A0A8I5KU76;A0A384MEE7;Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 yes no 0 0 0 4.5 0.5 1 1 38.856 38.923 2 0.015107 9013 20230619_1885_Aki_TMTPro18x_K_F5 111.73 67.116 183240 149710 158460 179200 232910 239960 219010 208520 281730 223060 238770 250510 250800 209230 227900 253450 308910 273870 169250 137320 164280 179320 235680 237370 223430 215570 281620 225640 247590 251670 254600 219560 236730 255050 294540 260030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 666620000 15249 1425 14448 29034;29035 23273;23274 23274 2 9606 Homo sapiens -0.00026746199432636786 LAPVPFFSLLQYE Unmodified 1522.8072 0.80716742 3401 P07741;H3BQZ9 APRT Adenine phosphoribosyltransferase yes no 0 0 0 3 0.816 1 1 1 69.712 69.741 2 0.0043342 22298 20230619_1882_Aki_TMTPro18x_K_F3 86.011 74.521 3973.1 2923.3 3657.3 3652.3 2656.9 3861.5 4497.3 2771.2 4168.4 3357.7 3239.7 1928.3 2247.4 1279 4382.3 3787.3 3605.1 3175.4 3669.1 2683.6 3728.4 3630.8 2894.3 3861.9 4413.3 2927.8 4223.3 3321.4 3320.1 2007.4 2422.8 1314.4 4372.5 3731.9 3453.9 3024 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2 2 2 61019000 15250 3401 14449 29036;29037;29038 23275;23276 23276 2 9606 Homo sapiens 0.06667612668547918 LAQAEAAGLHK Unmodified 1107.6037 0.60365701 1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;Q59H80;Q6W6M6 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 0 0 0 7 0 1 44.081 44.164 3 0.00031477 11009 20230619_1887_Aki_TMTPro18x_K_F7 96.059 71.267 71406 49811 62805 64415 75141 73194 70844 69208 75279 76859 77444 82346 90324 67244 77350 85786 94596 92739 65900 45752 64694 63968 76900 73280 71827 71187 76579 77422 79952 82827 91110 70899 79876 86269 90329 88017 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129910000 15251 1843 14450 29039 23277 23277 1 9606 Homo sapiens 0.05415932737537332 LAQAHPAGPPTLDPVNDLQLK Unmodified 2194.1746 0.17461691 1304 Q15477;A0A8V8TLC0;A0A1U9X8J0;A0A1U9X8J1;A0A1U9X8J2;A0A1U9X8J6;Q96BC0;O76046;Q9NPK3;A0A8V8TL97;H7C4L3;H7C5N0;A0A8V8TLA2;B4E0N1;B4DM01;A0A8V8TN04;A0A1U9X8I7;A0A1U9X8I9;B4DSY1;Q59F56 SKIV2L;SKI2W Helicase SKI2W yes no 0 0 0 8 0 1 57.017 57.068 4 2.4403E-11 16604 20230619_1888_Aki_TMTPro18x_K_F8 127.5 107.68 69508 55170 63714 67786 59717 90784 74285 75506 111980 83968 83839 82859 92775 80044 88394 88187 75409 84632 64215 50621 65206 67709 63018 89635 75193 78396 110730 84468 87724 84075 94192 83084 89248 88306 72340 80388 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239260000 15252 1304 14451 29040 23278 23278 1 9606 Homo sapiens 0.12529658352286788 LAQALHEMR Oxidation (M) 1083.5495 0.54951295 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 LMNB1 Lamin-B1 yes no 0 1 0 5.5 0.5 1 1 37.129 37.209 3 0.0019353 8421 20230619_1886_Aki_TMTPro18x_K_F6 87.123 66.564 289960 142450 276140 300360 430480 343360 360170 360150 385870 268130 372820 352540 345120 284670 368910 215820 381090 338390 267340 131960 283980 290650 432000 344360 367960 364340 390700 278610 381880 351720 354160 292420 374490 225390 364210 320260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 315690000 15253 3482 14452 29041;29042 23279 23279 2130 1 9606 Homo sapiens 0.011080173143227512 LAQALHEMR Unmodified 1067.5546 0.55459833 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 LMNB1 Lamin-B1 yes no 0 0 0 7.67 0.471 1 2 44.273 44.313 2;3 6.8262E-09 11201 20230619_1888_Aki_TMTPro18x_K_F8 187.14 138.38 409830 350650 422780 382930 386080 498530 380010 358150 436660 328790 352640 298370 353890 285270 385270 359020 390110 278020 379170 321290 427620 385700 404390 492060 385410 374880 438000 333320 365580 304170 362580 298560 391290 355210 372430 265330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 868200000 15254 3482 14452 29043;29044;29045 23280;23281;23282 23281 3 9606 Homo sapiens 0.023523211769543195 LAQANGWGVMVSHR Oxidation (M) 1540.7569 0.75687996 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2;A4QMW8 ENO1 Alpha-enolase;Enolase yes no 0 1 0 3.5 0.5 1 1 44.869 44.928 3 7.4191E-07 11794 20230619_1882_Aki_TMTPro18x_K_F3 125.95 93.211 69424 63030 67032 66737 86838 96341 88758 88710 114360 55957 56115 47203 54803 50812 77338 59675 59261 53258 64220 57724 68601 67513 88730 95005 90106 90243 112550 58171 60250 48518 57088 52745 77149 59531 56834 50675 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 473630000 15255 293 14453 29046;29047 23283 23283 178 1 9606 Homo sapiens 0.00813179791703078 LAQANGWGVMVSHR Unmodified 1524.762 0.76196534 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2;A4QMW8 ENO1 Alpha-enolase;Enolase yes no 0 0 0 4.5 0.5 1 1 49.361 49.416 3 2.0249E-16 13502 20230619_1885_Aki_TMTPro18x_K_F5 202.15 182.41 39673 37690 45981 40694 40069 54468 44721 43453 58496 42880 46091 47505 46446 36205 51642 48421 43054 48705 36770 34518 46075 41051 42299 53765 45253 45138 58265 43546 47913 47640 47611 38378 51933 48489 41315 46237 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 640590000 15256 293 14453 29048;29049 23284 23284 1 9606 Homo sapiens 0.020574836543346464 LAQAWFNTHR Unmodified 1242.6258 0.62578944 4319 Q96A33;Q96A33-2 CCDC47 Coiled-coil domain-containing protein 47 yes no 0 0 0 5.5 0.5 1 1 49.5 49.577 3 4.5832E-10 13582 20230619_1885_Aki_TMTPro18x_K_F5 175.65 132.43 134120 118110 128220 122300 127600 155010 158120 151090 182470 112310 111730 109900 125860 110180 138760 133060 141600 121880 124030 108160 130740 123690 133550 154170 158340 153570 181470 115660 118640 111780 128680 114830 140990 132750 135310 115950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139410000 15257 4319 14454 29050;29051 23285;23286 23285 2 9606 Homo sapiens 0.014181572059897007 LAQDFLDSQNLSAYNTR Unmodified 1954.9385 0.93846896 2654 B4E357;Q5JPB8;Q53HL4;Q53GT4;G3V1D3;G3V180;Q9NY33-4;Q9NY33;E9PQ14;E9PNX5;E9PKK8;E9PPK9 DKFZp686O1117;DPP3 Dipeptidyl peptidase 3 yes no 0 0 0 7 0 1 61.65 61.689 3 2.315E-06 18563 20230619_1887_Aki_TMTPro18x_K_F7 79.676 68.57 297990 217540 286030 258790 199440 296620 256420 256890 302840 376090 305550 343590 383440 282170 311510 391200 350280 418840 275270 199610 290140 258550 216240 296020 256860 268330 306510 372600 316990 347980 385170 299170 320630 392630 335250 397270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 345870000 15258 2654 14455 29052 23287 23287 1 9606 Homo sapiens -0.0008027349217627489 LAQDGAHVVVSSR Unmodified 1337.7052 0.70516197 2696 F5GWZ1;B7Z6Z5;Q9BTZ2-3;Q9BTZ2-7;Q9BTZ2-2;Q9BTZ2-5;Q9BTZ2-8;Q9BTZ2-4;Q9BTZ2 DHRS4 Dehydrogenase/reductase SDR family member 4 yes no 0 0 0 6 0 1 38.268 38.349 3 9.9736E-05 8855 20230619_1886_Aki_TMTPro18x_K_F6 104.03 65.678 34196 27615 37352 35690 49565 49664 43140 48740 53959 39887 52693 41445 45671 36511 54637 38771 49971 48139 31642 25349 37848 35568 50312 49141 44218 49586 54248 40855 53756 41885 47237 37974 55053 39501 47844 45630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57432000 15259 2696 14456 29053 23288 23288 1 9606 Homo sapiens 0.04981759369456995 LAQDPYR Unmodified 861.43447 0.43446642 3474 P18583-5;P18583-9;P18583;P18583-7;P18583-4;P18583-3;P18583-10;P18583-6 SON Protein SON yes no 0 0 0 4 0 1 39.06 39.102 2 0.026074 9174 20230619_1883_Aki_TMTPro18x_K_F4 97.033 58.795 159010 110740 139370 147130 172430 186370 172170 156860 206610 160460 160900 145710 171830 136440 152780 168200 181680 148300 146750 101740 143760 146060 176540 184790 174590 162400 206620 161670 167600 148360 174110 142760 157360 167380 173320 141190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107090000 15260 3474 14457 29054 23289 23289 1 9606 Homo sapiens -0.0017934382515250036 LAQECCYHNNR Unmodified 1463.6034 0.60341579 4602 Q9NVH2-4;Q9NVH2-3;Q9NVH2-2;Q9NVH2;D3DT96 INTS7 Integrator complex subunit 7 yes no 0 0 0 4.5 0.5 1 1 31.196 31.266 3 3.1047E-17 6147 20230619_1885_Aki_TMTPro18x_K_F5 227.94 219.21 22006 18073 22123 20544 26299 25205 27617 24017 27926 23867 27670 25107 28116 25387 19314 23332 28420 23844 20350 16568 22515 20616 26984 25121 27770 24620 28409 24180 28393 25448 28280 26063 20317 23503 27072 22658 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27586000 15261 4602 14458 29055;29056 23290;23291 23291 2 9606 Homo sapiens -0.10984178316243742 LAQEGIYTLYPFINSR Unmodified 1883.9781 0.97814893 3813 Q08J23-2;Q08J23;Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 0 0 0 3.5 0.5 1 1 63.915 63.934 3 1.7926E-14 20101 20230619_1882_Aki_TMTPro18x_K_F3 175.61 160.51 19622 16674 22766 25909 20364 24756 21931 22325 23301 26419 27561 28351 26362 24931 26349 27982 26321 33051 18172 15336 22849 25374 21392 25050 22081 23094 23844 26534 28034 28573 26956 25988 26804 28349 25230 31313 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80232000 15262 3813 14459 29057;29058 23292 23292 1 9606 Homo sapiens 0.07151898249207989 LAQENGWGVMVSHR Oxidation (M) 1598.7624 0.76235927 3418 Q6FHV6;P09104;A8K3B0;P09104-2;F5H0C8 ENO2 Gamma-enolase;Enolase yes no 0 1 0 8 0 1 44.311 44.33 3 3.5979E-05 11217 20230619_1888_Aki_TMTPro18x_K_F8 101.2 92.309 38149 30239 36206 38530 47218 49522 46736 41914 60407 43720 44427 44220 46158 40487 46420 42120 62132 52316 35254 27756 37122 38365 48166 49072 47539 43401 60087 44153 46414 44735 47104 41988 48034 42886 59227 49618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48708000 15263 3418 14460 29059 23293 23293 2034 1 9606 Homo sapiens -0.013071414164642192 LAQENMDLFK Unmodified 1207.5907 0.59070906 1411 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;P35221-3;B3KSR8;E5RJP7;E5RGD2 CTNNA1 Catenin alpha-1 yes no 0 0 0 6 0 1 58.897 58.962 3 0.00038393 17658 20230619_1886_Aki_TMTPro18x_K_F6 92.611 74.299 89386 105380 104840 92673 123800 126940 142080 124420 138120 130760 151320 138250 130040 107770 135350 144510 133460 140150 82998 96293 105450 95213 127410 125820 142030 127450 141400 132030 153650 139060 133610 114110 137500 144360 127760 133140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57950000 15264 1411 14461 29060 23294 23294 1 9606 Homo sapiens -0.004782664368576661 LAQFEPSQR Unmodified 1074.5458 0.54580778 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 5.5 0.5 1 1 45.574 45.655 2 5.2314E-05 11994 20230619_1886_Aki_TMTPro18x_K_F6 182.98 127.45 797070 608560 775410 798590 839380 930300 850380 833700 1011900 1007100 1066700 1059700 1002600 864440 1016900 1121600 1061800 977520 736550 558850 790580 792500 867390 928450 861930 863040 1024000 1010100 1089100 1066900 1026000 911370 1036900 1114700 1014900 930290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1351100000 15265 3811 14462 29061;29062 23295;23296 23296 2 9606 Homo sapiens 0.011516708121462216 LAQFVAR Unmodified 803.46537 0.46537261 3142 J3QK89;Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes no 0 0 0 3.5 0.5 1 1 48.408 48.468 2 0.024398 13271 20230619_1883_Aki_TMTPro18x_K_F4 99.279 28.021 146530 124440 127610 144660 155210 172970 164650 163610 197020 120400 116780 100590 97925 85934 132980 112730 122060 93353 135380 114090 131740 144800 159380 172540 166370 166620 195440 123540 122730 102610 102260 90520 133890 111850 116690 88977 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201090000 15266 3142 14463 29063;29064 23297 23297 1 9606 Homo sapiens 0.05577854279761141 LAQFVEHWK Unmodified 1156.6029 0.60292873 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q14917;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 2.33 0.471 2 1 58.909 58.923 2;3 0.00016251 18135 20230619_1881_Aki_TMTPro18x_K_F2 130.94 81.44 72448 61303 67837 64597 64551 79270 81063 82659 88162 88150 75246 80031 84576 77509 91380 93187 83487 85168 66970 56155 69245 65210 67823 79123 80997 84320 88944 88544 78292 81517 86383 80838 92377 92949 79968 80972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193430000 15267 1022;3868 14464 29065;29066;29067 23298;23299;23300 23298 3 9606 Homo sapiens 0.030891380885123 LAQGEYIAPEK Unmodified 1217.6292 0.62920306 2140 B7Z3Z9;E7EPM6;P33121;P33121-2;A8K9T3;B4E0R0;P33121-3;H0Y9Z9;A0A994J7S4;H0Y9U7;B4DX30;Q9ULC5-4;A0A8C8KCK5;Q9ULC5;A0A8C8L3F5;Q9ULC5-3 ACSL1;ACSL5 Long-chain-fatty-acid--CoA ligase 1;Long-chain-fatty-acid--CoA ligase 5 yes no 0 0 0 4.5 0.5 1 1 49.39 49.445 2 0.0053589 13553 20230619_1885_Aki_TMTPro18x_K_F5 98.943 85.889 78167 59987 74556 84236 68176 77094 77043 69360 80599 113800 133760 153400 138040 113200 131740 143080 140480 163580 72223 55127 75997 82948 71573 78317 77329 72655 84128 113760 135060 152510 140390 119690 134630 144400 134490 155070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 44270000 15268 2140 14465 29068;29069 23301;23302;23303 23303 3 9606 Homo sapiens 0.02909362469313237 LAQGLTHLGK Unmodified 1036.6029 0.60292873 3840 Q59EG8;Q13200;B4DM22;Q13200-3;Q13200-2;Q13041 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 3 0 1 47.739 47.818 3 0.00010064 13140 20230619_1882_Aki_TMTPro18x_K_F3 126.19 78.256 432950 318700 363930 430850 426250 474620 473270 451610 535360 522890 540330 493120 587330 444160 486920 631580 523590 513230 399560 292800 376820 426310 439320 476010 476270 464900 542160 523790 555800 500730 592780 469780 499730 624630 500540 488760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 373330000 15269 3840 14466 29070 23304 23304 1 9606 Homo sapiens 0.08609138088513646 LAQGPELAEDDANLLHK Unmodified 1832.9268 0.92684164 4295 Q92558 WASF1 Wiskott-Aldrich syndrome protein family member 1 yes yes 0 0 0 3.5 0.5 1 1 54.929 54.958 3 1.1123999999999998E-19 16193 20230619_1883_Aki_TMTPro18x_K_F4 193.41 167.55 59759 50018 62359 66209 55665 69158 65531 59992 61160 80976 84829 83708 89658 72701 76195 95041 87992 100560 55285 45920 63062 65556 58642 69479 65400 62511 63578 80763 86120 84501 90683 76566 78478 95393 84163 95405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168950000 15270 4295 14467 29071;29072 23305 23305 1 9606 Homo sapiens 0.04369529484483792 LAQGSPAVAR Unmodified 968.54033 0.54032847 2376 B7Z2Z5;B7Z7H2;B7Z286;B7Z3B0;B7Z9L8;B7Z2H8;B7Z9C6;B3KPL1;Q5TCZ1-2;Q5TCZ1-3;Q5TCZ1 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 0 0 0 8 0 1 36.682 36.668 2 0.0017989 8135 20230619_1888_Aki_TMTPro18x_K_F8 101.65 73.224 16557 8599.1 15468 13538 18640 23528 16179 17533 18789 13148 19525 23761 15898 16721 17021 10832 23362 20711 15266 7928.4 15841 13390 19075 22877 16545 18203 18996 13855 19870 23375 16422 17160 17601 11556 22273 19576 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7284400 15271 2376 14468 29073 23306 23306 1 9606 Homo sapiens 0.054799920203208785 LAQHITYVHQHSR Unmodified 1588.8223 0.82225741 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 3 0 1 30.864 30.95 4 9.2568E-05 5934 20230619_1882_Aki_TMTPro18x_K_F3 109.44 79.004 19775 20613 20129 19312 20885 33461 21964 23535 24043 18896 22266 22262 23805 18328 28405 15317 28480 23805 18320 18851 20438 19804 21745 32515 22156 24592 24288 19463 23011 22306 24453 18899 28730 15959 27216 22537 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31835000 15272 1091 14469 29074 23307 23307 1 9606 Homo sapiens 0.05139917309065822 LAQLEEAK Unmodified 900.49165 0.49164694 2057 Q5QNZ2;Q08ET0;A8K4W2;P24539;Q53GB3 ATP5F1;hCG_39985 ATP synthase F(0) complex subunit B1, mitochondrial yes no 0 0 0 4.5 0.5 1 1 50.209 50.265 3 0.0023769 14124 20230619_1883_Aki_TMTPro18x_K_F4 93.143 41.289 208000 178590 214540 224310 219930 248540 266220 239870 322590 259900 298410 278110 277950 254020 270900 282050 304850 285590 192440 163850 217580 223100 229340 249270 267380 246270 324180 262310 306280 280790 284150 264230 277520 283190 291210 271290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334860000 15273 2057 14470 29075;29076 23308 23308 1 9606 Homo sapiens 0.037420786605594 LAQLITQAK Unmodified 984.59678 0.59678072 1705 Q9NXE4-4;Q9NXE4-6;A0A7P0T9J6;A0A7P0TB24;Q9NXE4-8;Q9NXE4-2;Q9NXE4;Q9NXE4-5;Q9NXE4-9;Q9NXE4-3;Q9NXE4-10;Q9NXE4-7;A0A7P0TB44;B4E0T5;H7C1Q6;H7C0W5;H7C235 SMPD4 Sphingomyelin phosphodiesterase 4 yes no 0 0 0 4 0 1 58.49 58.493 3 0.05273 17761 20230619_1883_Aki_TMTPro18x_K_F4 46.819 17.152 41632 32856 39354 48468 45679 50921 46771 46938 56985 27866 27698 24905 32477 24897 30201 28890 31778 35720 38470 30208 40318 47664 46999 51190 47389 47731 56224 29155 29992 25449 32884 25925 30830 29351 30417 33841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35808000 15274 1705 14471 29077 23309 23309 1 9606 Homo sapiens 0.10386619857001733 LAQMFSDMVLK Unmodified 1281.6461 0.64611545 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 3 0 1 64.941 64.973 3 5.462E-07 20519 20230619_1882_Aki_TMTPro18x_K_F3 165.66 155.98 143160 83929 118780 118320 76261 164060 82604 90434 140600 118440 87703 100570 145410 113100 85014 170260 141640 132150 131960 77227 122100 117170 83593 160500 84790 98209 137910 117830 95001 103400 143730 119280 91101 167770 134910 125960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120890000 15275 1817 14472 29078 23310 23310 1 9606 Homo sapiens 0.016558237592789737 LAQMSICSSLAR Oxidation (M) 1351.6588 0.6588054 3362 V9HWF9;O95861-4;O95861;A6NF51;O95861-2;F8W1J0;F8VVW8;F8VZG4 HEL20;BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes no 0 1 0 2 0 1 46.433 46.512 2 0.054904 12827 20230619_1881_Aki_TMTPro18x_K_F2 78.683 63.539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15276 3362 14473 29079 23311 23311 1966 1 9606 Homo sapiens -0.002957648485107711 LAQMSICSSLAR Unmodified 1335.6639 0.66389078 3362 V9HWF9;O95861-4;O95861;A6NF51;O95861-2;F8W1J0;F8VVW8;F8VZG4 HEL20;BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes no 0 0 0 4 0 1 53.263 53.282 2 0.0074692 15493 20230619_1883_Aki_TMTPro18x_K_F4 76.332 39.311 147500 128200 149230 189750 143370 205010 156540 173110 183890 154220 155150 183120 167110 150270 166710 204500 193030 215510 136460 117830 151660 186610 150140 205220 157990 178570 184590 157800 161280 183500 170270 158920 171200 205110 184590 204490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46560000 15277 3362 14473 29080 23312 23312 1 9606 Homo sapiens 0.009485390141207972 LAQNPLFWK Unmodified 1115.6128 0.61276513 3995 Q53FT3 C11orf73 Protein Hikeshi yes yes 0 0 0 5 0 1 62.077 62.125 2 0.0088014 18883 20230619_1885_Aki_TMTPro18x_K_F5 87.323 55.002 133930 104430 129530 125210 99071 124820 135270 120330 139500 123130 135450 127900 128960 105560 165160 122360 116390 110980 123770 95806 131490 124780 106400 126130 134440 123390 141620 124460 138930 128890 133460 110500 164380 122210 111800 105550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93934000 15278 3995 14474 29081 23313 23313 1 9606 Homo sapiens 0.05958326093877986 LAQQDVEILLNLR Unmodified 1523.8671 0.86714192 2369 B3KP18;Q6NUQ1 RINT1 RAD50-interacting protein 1 yes no 0 0 0 7.67 0.471 1 2 50.939 51.017 2;3 0.02327 13936 20230619_1888_Aki_TMTPro18x_K_F8 56.087 26.319 2453000 2056700 2242500 2138800 1503400 1664400 2245400 2147200 391280 2227100 2631100 2718600 3227900 2776700 2532900 3063600 2866100 2414300 2267000 1883800 2283800 2149300 1635700 1731300 2167400 2163600 599260 2256500 2621600 2740900 3241500 2875700 2608900 3036900 2735900 2301600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3738899999.9999995 15279 2369 14475 29082;29083;29084 23314;23315;23316 23315 3 9606 Homo sapiens 0.12616303331765266 LAQQISDEASR Unmodified 1216.6048 0.60477922 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;A0A994J766 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 0 3.5 0.5 1 1 44.606 44.665 2 0.0009974 11597 20230619_1883_Aki_TMTPro18x_K_F4 104.22 76.209 22370 16439 16424 22589 22949 21731 26375 19899 27550 24079 24609 28037 24819 26803 24058 27885 27053 29688 20626 15106 17315 22280 23394 22005 26401 20596 27875 24247 25425 28230 25331 27720 24665 28097 25874 28169 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94465000 15280 1867 14476 29085;29086 23317 23317 1 9606 Homo sapiens 0.005141023158103053 LAQQPHQNQAK Unmodified 1261.6527 0.65273247 4409 Q9BPX3;Q6NUR1;D6RA93 NCAPG Condensin complex subunit 3 yes no 0 0 0 8 0 1 31.702 31.707 3 6.79E-05 6217 20230619_1888_Aki_TMTPro18x_K_F8 125.75 96.448 13503 5983.5 17058 16683 24501 23441 21128 23772 18507 13281 21302 17190 16716 11040 20863 6851.2 20082 12278 12477 5576.6 17140 16039 24720 23180 21428 23968 19087 14098 21507 17072 17376 11389 21016 7304.5 19168 11632 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10013000 15281 4409 14477 29087 23318 23318 1 9606 Homo sapiens 0.032372210265066315 LAQQQAAAAAAAAAAASQQGSAK Unmodified 2054.0505 0.050479026 4477 Q9BZK7;C9JLJ1;B7Z475;A0A0D9SF63;A0A1B0GUU2;A0A068L529;C9IYU9;C9JBN1;C9JCK0;A0A0D9SF25 TBL1XR1;TBLR1-RARA fusion F-box-like/WD repeat-containing protein TBL1XR1 yes no 0 0 0 2.5 0.5 1 1 55.644 55.685 3 3.2674E-44 16628 20230619_1882_Aki_TMTPro18x_K_F3 233.89 211.69 48875 38121 39304 42347 45665 50428 48728 46902 53822 53619 50982 50972 64739 55035 52485 70470 58062 58305 45107 34946 40838 42536 47039 50311 49103 48335 54464 53766 53040 52042 65059 57437 53994 69837 55501 55507 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 407670000 15282 4477 14478 29088;29089 23319;23320 23320 2 9606 Homo sapiens 0.06561580584821058 LAQQYYLVYQEPIPTAQLVQR Unmodified 2520.3377 0.33765949 609 Q53GF5;A0A024RA52;P25787;A0A7I2YQP7;C9JCK5;A0A7I2V2H3;Q6MZI6 PSMA2;DKFZp686D09174 Proteasome subunit alpha type;Proteasome subunit alpha type-2 yes no 0 0 0 3 0 1 62.788 62.818 3 8.2646E-37 19589 20230619_1882_Aki_TMTPro18x_K_F3 220.34 182 22278 12833 20461 20187 15724 20668 18447 19995 49620 21620 20760 24756 29548 25691 21409 31375 28308 31927 20548 11825 20864 19783 16880 20830 19384 20517 47545 21935 23048 25026 29518 26768 22350 31437 27043 30305 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67191000 15283 609 14479 29090 23321 23321 1 9606 Homo sapiens 0.1383041668345868 LAQVSPELLLASVR Unmodified 1494.877 0.87697832 2146 A8KA19;O43592;A0A024RB67 XPOT Exportin-T yes no 0 0 0 3 0 1 63.597 63.628 3 5.4426E-05 19921 20230619_1882_Aki_TMTPro18x_K_F3 97.836 64.837 16770 13661 14949 19655 15734 18724 19993 20633 25848 21536 21824 22293 23103 18188 22528 23244 24171 25213 15493 12555 15382 19334 16418 19038 20086 20972 25827 21745 22642 22459 23504 19175 23013 23384 23118 23923 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18349000 15284 2146 14480 29091 23322 23322 1 9606 Homo sapiens 0.1493349133713764 LAQYESK Unmodified 837.42323 0.42323303 271 A0A024R3W7;P24534 EEF1B2 Elongation factor 1-beta yes no 0 0 0 5.5 0.5 1 1 43.874 43.96 2 0.00078143 11193 20230619_1886_Aki_TMTPro18x_K_F6 138.83 27.177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15285 271 14481 29092;29093 23323;23324 23324 2 9606 Homo sapiens -0.0019816591927792615 LASAAYPDPSK Unmodified 1118.5608 0.56078914 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 0 6.67 0.471 1 2 47.628 47.713 2;3 0.00022157 12515 20230619_1887_Aki_TMTPro18x_K_F7 146.11 106.06 123210 97971 106340 120850 110320 121330 120760 114020 154980 133090 157630 198270 163180 146600 159840 196570 208810 215530 113780 89896 109570 120160 114650 122500 122200 117580 155960 135490 162140 196520 166330 155500 165500 197660 199360 204490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 313620000 15286 1102 14482 29094;29095;29096 23325;23326 23326 2 9606 Homo sapiens 0.0062511788946721936 LASAFTEEQAVLYNQR Unmodified 1838.9163 0.91627696 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;B3KMI9 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 0 6 0.816 1 1 1 60.946 60.997 3 1.421E-107 18545 20230619_1886_Aki_TMTPro18x_K_F6 311.99 296.1 85196 65089 77950 87830 81019 96301 93295 91422 109950 97875 93825 103140 109200 87159 107580 108760 102170 106180 78690 59789 79907 86915 84330 96591 93855 93918 110430 98753 97784 103900 110840 91597 109130 108810 97833 100860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 540140000 15287 4661 14483 29097;29098;29099 23327;23328 23327 2 9606 Homo sapiens 0.03037546830046267 LASAPVPFTVLSLTGNPCK Unmodified 1971.0499 0.049933666 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;Q5T4S7-5 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 6 0 1 64.072 64.118 3 2.0266E-14 19978 20230619_1886_Aki_TMTPro18x_K_F6 146.33 116.99 110090 85260 89675 100130 87573 89233 107390 102630 111380 138730 127840 158210 139210 160180 111890 162450 174000 172280 101610 78202 92819 99789 91638 91418 107260 104930 114050 138820 131070 159680 140770 165090 117960 163630 165870 163540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67341000 15288 4061 14484 29100 23329 23329 1 9606 Homo sapiens 0.1032506961139461 LASDLLEWIR Unmodified 1214.6659 0.66592292 387;1069 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;G3V2W4;F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;B4DSX0 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 no no 0 0 0 8 0 1 65.495 65.515 2 0.00030953 20120 20230619_1888_Aki_TMTPro18x_K_F8 153.24 116.69 39487 29925 32738 30044 24663 33792 36437 35043 37467 50369 45488 42887 47417 43075 42632 55430 47765 46975 36444 27412 33690 30413 26636 33917 36100 36112 38487 49836 46361 43896 48125 45063 43790 54995 45646 44710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8086500 15289 387;1069 14485 29101 23330 23330 1 9606 Homo sapiens 0.06717659085893501 LASEEPPDDEEALATIR Unmodified 1854.8847 0.88470206 4650 Q9UBB4;Q9UBB4-2;B1AHE4 ATXN10 Ataxin-10 yes no 0 0 0 1.67 0.471 1 2 54.473 54.485 2 2.0610000000000002E-29 16181 20230619_1880_Aki_TMTPro18x_K_F1 276.71 265.5 54763 42600 52230 46925 45207 51206 50199 52474 58909 62521 61356 61907 70054 61798 60878 73740 65428 72574 50602 39050 53126 47129 47674 51498 50628 53775 59655 62629 63218 62887 70801 64374 62392 73808 62607 68917 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107910000 15290 4650 14486 29102;29103;29104 23331;23332 23331 2 9606 Homo sapiens -0.008544907145278557 LASELQALK Unmodified 971.56515 0.56514624 525 A8K2R8;A0A024R8L8;K7EKI0;B7ZLH8;Q92817 EVPL Envoplakin yes no 0 0 0 7.33 0.471 2 1 54.303 54.369 2;3 0.0082232 15477 20230619_1887_Aki_TMTPro18x_K_F7 104.37 26.625 138430 92140 122010 122800 106130 129460 140840 121460 54101 155510 174680 201790 197020 168420 178890 187820 197580 202770 127730 84677 125100 121580 112330 130180 137430 125640 65199 156500 174780 201540 199460 175840 183300 189260 188900 192420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 439410000 15291 525 14487 29105;29106;29107 23333;23334 23333 2 9606 Homo sapiens 0.078226271030303 LASGCDGSEIPDEVK Unmodified 1575.7087 0.70865195 1812 X5D7P8;A0A8V8TKT5;Q6E0B2;X5DP03;X5D2U3;Q9UEW8-2;Q9UEW8 STK39 STE20/SPS1-related proline-alanine-rich protein kinase yes no 0 0 0 2 0.816 1 1 1 51.016 51.039 2;3 1.6033E-10 14918 20230619_1881_Aki_TMTPro18x_K_F2 116.19 95.525 71179 51242 62900 59111 52716 60201 69107 55776 69404 71402 75499 77896 79332 67185 62084 94299 81877 80963 65704 47007 64413 59092 56023 60706 68731 57757 70937 71525 77345 78453 80041 71063 64708 93482 78141 77044 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165280000 15292 1812 14488 29108;29109;29110 23335;23336 23335 2 9606 Homo sapiens -0.0561740342950543 LASGDWFTSR Unmodified 1138.5407 0.5407224 2118 A8K8B0;P30154;P30154-2;P30154-4;P30154-3 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 1 0 1 56.261 56.261 2 0.0015475 16959 20230619_1880_Aki_TMTPro18x_K_F1 105.52 86.546 121730 95687 135670 139970 131870 166710 157740 165310 186600 151030 137270 112710 144480 93532 131540 130660 116520 101080 112640 87968 136670 138030 138120 166390 158430 168520 186420 152280 143310 115590 146400 99205 133150 129060 111520 96381 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40166000 15293 2118 14489 29111 23337 23337 1 9606 Homo sapiens -0.023006330504813377 LASGEHIAAFCLTEPASGSDAASIR Unmodified 2530.2122 0.21220098 4531 Q9H845;Q9H9W4;A0A7P0T8U3;A0A7P0T871;A0A7P0T7Z1;A0A7P0TB58;A0A7P0T9N9;Q59FN3;A0A7P0TB68;A0A7P0Z450 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 0 5.5 0.5 1 1 55.039 55.11 3 4.8298E-35 16052 20230619_1886_Aki_TMTPro18x_K_F6 209.24 191.34 17777 13009 18859 16441 15796 17478 19369 18991 14763 18657 22774 22542 21474 15748 21893 17729 18591 24294 16436 11943 19008 16345 16727 17629 19197 19290 15627 18971 22938 22474 21949 16594 22051 18164 17859 22984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171270000 15294 4531 14490 29112;29113 23338 23338 1 9606 Homo sapiens 0.008303367649205029 LASHEYLK Unmodified 959.50763 0.50763136 705 A0A024RC59;B4E396;H0YKB5;B3KTQ2;A0A024RC55;Q08431-2;Q08431-3;Q08431-4;Q08431;A0A8Q3SI86;A0A8Q3WKS4;A0A8Q3SIX6;A0A8Q3SIZ9;H0YKS8 MFGE8 Lactadherin;Lactadherin short form;Medin yes no 0 0 0 7 0 1 41.377 41.449 3 0.00037536 9856 20230619_1887_Aki_TMTPro18x_K_F7 133.23 96.81 52990 44383 57336 63492 69864 67871 67202 63209 79427 65292 75837 74144 71341 56292 64607 80853 78973 72732 49039 40782 58099 62580 71432 68201 68280 64978 80032 66166 77762 74304 72622 59952 66697 80351 75379 69190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30972000 15295 705 14491 29114 23339 23339 1 9606 Homo sapiens 0.02625784897475114 LASHLNLAMCHLK Oxidation (M) 1522.7748 0.77483821 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 1 0 3.5 0.5 1 1 45.616 45.676 4 0.00017052 12156 20230619_1882_Aki_TMTPro18x_K_F3 102.87 90.241 48347 57716 46938 58440 67212 64144 58439 57435 66957 32736 41490 39001 43232 35441 47658 42096 46536 37117 44822 52795 48161 59044 67905 64331 59669 58503 66610 34667 43847 39242 44282 37019 48287 41942 44470 35341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202670000 15296 3789 14492 29115;29116 23340 23340 2474 1 9606 Homo sapiens 0.034361787221996565 LASHLNLAMCHLK Unmodified 1506.7799 0.77992359 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 49.464 49.52 4 1.0371E-10 13787 20230619_1883_Aki_TMTPro18x_K_F4 175.21 148.78 73827 83170 79713 67832 74817 107820 83840 84790 125150 38456 45150 47099 33782 32844 50944 32301 32643 38294 68471 75969 80374 70382 78604 105460 85240 86953 121650 41796 49627 46950 35703 34302 50392 32870 31449 36287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 583320000 15297 3789 14492 29117;29118 23341 23341 1 9606 Homo sapiens 0.04680482584831225 LASIVEQVSVLQNQGR Unmodified 1739.953 0.95299681 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 3 0 1 63.46 63.491 3 1.5324999999999998E-19 19903 20230619_1882_Aki_TMTPro18x_K_F3 209.22 190.49 21592 15333 17962 16381 15802 20101 20965 20275 20888 19024 19449 19379 19289 18982 16241 22812 23411 26005 19922 14057 18511 16520 16749 20045 20838 20665 21220 19308 20014 19654 19574 19791 17002 23019 22348 24657 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 483760000 15298 3654 14493 29119 23342 23342 1 9606 Homo sapiens 0.11261843446595776 LASLQQENK Unmodified 1029.5455 0.54547343 41 Q05CP8;A0A024QZJ7;Q16204;Q15302;J7M8C2;J7MDF2;A0A2H4FYY8 CCDC6;CCDC6-RETc;CCDC6-RETa Coiled-coil domain-containing protein 6 yes no 0 0 0 7 0 1 45.737 45.825 2 0.0044738 11652 20230619_1887_Aki_TMTPro18x_K_F7 90.629 59.257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15299 41 14494 29120 23343 23343 1 9606 Homo sapiens 0.03188251092274186 LASNALQEPSSFR Unmodified 1418.7154 0.7153923 4521 Q9H6S0;Q6ZMY0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes no 0 0 0 7 0 1 49.666 49.75 3 8.6988E-05 13455 20230619_1887_Aki_TMTPro18x_K_F7 77.696 62.43 48805 41046 44861 53431 52580 59372 56226 59581 72983 68015 60755 70622 71385 64273 56234 91811 85142 86933 45107 37675 46073 53007 54148 59582 56989 61064 72941 68379 63426 71373 71870 67941 59242 91429 81196 82615 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25577000 15300 4521 14495 29121 23344 23344 1 9606 Homo sapiens 0.022783223040278244 LASQANIAQVLAELK Unmodified 1567.8934 0.89335667 1172;3819 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087X253;B4DWG4;B4E261;A0A087WZQ6;A0A087WU93;A0A087WYD1;Q10567-4;Q10567-3;Q10567-2;Q10567;C9J1E7 AP2B1;DKFZp781K0743;AP1B1 AP-2 complex subunit beta;AP complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 3 0 1 64.687 64.719 2 0.061291 20414 20230619_1882_Aki_TMTPro18x_K_F3 56.225 38.493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15301 1172;3819 14496 29122 23345 23345 1 9606 Homo sapiens 0.13212572503221054 LASQGDSISSQLGPIHPPPR Unmodified 2056.0702 0.070151836 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 1 0 1 49.293 49.293 3 4.0538E-45 13988 20230619_1880_Aki_TMTPro18x_K_F1 256.49 234.82 34798 32126 33100 38478 33818 37733 36524 38483 45853 45135 50268 49227 51704 46674 43186 59743 61747 68379 32190 29453 33809 38328 35164 38235 36971 39443 46358 45389 51412 49736 52358 48924 45183 60250 58945 64831 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117170000 15302 3197 14497 29123 23346;23347 23346 2 9606 Homo sapiens 0.08435956595576499 LASRPTRPPEPR Unmodified 1375.7684 0.76843093 4130 Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A8I5KSP1;A0A0B4J210;E5RH50;H0YBW1;H0YAN4;E5RHK4 LARP1 La-related protein 1 yes no 0 0 2 4 0.816 1 1 1 30.251 30.33 4 2.2455E-05 5625 20230619_1883_Aki_TMTPro18x_K_F4 109.15 78.318 118300 86400 106270 122030 109740 119180 125460 114980 128670 129440 136020 138710 140650 121790 133220 142730 151230 142710 109220 79421 109100 120230 114120 120620 125680 118210 131210 130330 139450 139820 143070 127280 136630 143080 144460 135570 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 219420000 15303 4130 14498 29124;29125;29126 23348;23349;23350 23349 3 9606 Homo sapiens 0.09557744877361074 LASSVLR Unmodified 744.44939 0.4493882 1679 J3QR09;J3KTE4;Q53G49;A0A7I2YQG2;P84098;A0A7I2V638;A0A7I2V4U6;A0A7I2V2L0;A0A7I2V512 RPL19 Ribosomal protein L19;60S ribosomal protein L19 yes no 0 0 0 2 0.816 1 1 1 44.105 44.155 2 0.023296 11468 20230619_1882_Aki_TMTPro18x_K_F3 100.75 26.564 231080 212830 213350 294660 384750 365400 330780 314170 441830 97537 154960 137690 88776 110860 218160 101810 101470 91301 213700 195420 221240 291520 384380 362960 339640 318840 431150 112110 169710 137300 99125 114530 212490 102290 98143 86867 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 461270000 15304 1679 14499 29127;29128;29129 23351 23351 1 9606 Homo sapiens 0.06694148042856796 LASTLVHLGEYQAAVDGAR Unmodified 1970.0221 0.022139011 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;J3KS13 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 8 0 1 60.436 60.473 3 1.8389E-60 17902 20230619_1888_Aki_TMTPro18x_K_F8 295.82 266.33 52914 48015 52094 57739 48032 53018 55766 52446 55333 64643 54094 65615 71132 51717 62100 71824 57777 77091 48955 44026 52959 57453 50408 53971 55777 53972 56433 64677 56393 66055 71559 54922 63128 72111 55456 73095 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 332240000 15305 826 14500 29130 23352 23352 1 9606 Homo sapiens 0.0759288267552165 LASTPFK Unmodified 762.42759 0.42759012 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 2.5 0.5 1 1 49.757 49.824 2 0.025649 14058 20230619_1882_Aki_TMTPro18x_K_F3 97.602 9.5731 171360 147330 166940 181020 183610 207720 204210 200330 234200 182960 190330 121000 137000 103880 136110 175190 155770 146060 158470 135140 170310 180390 190020 207830 205580 204670 234930 184040 194520 125390 141420 111570 139730 173140 148780 139070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 323760000 15306 3578 14501 29131;29132 23353 23353 1 9606 Homo sapiens 0.03687343294279799 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK Unmodified 2773.4246 0.4246366 712 P05387;A0A024RCA7;H0YDD8 RPLP2 60S acidic ribosomal protein P2 yes no 0 0 0 6.5 0.5 1 1 54.573 54.643 3 1.9628E-41 15842 20230619_1886_Aki_TMTPro18x_K_F6 215.71 201.55 121290 105100 114350 117810 100450 127780 126390 115390 129380 164470 135310 133080 163600 138100 126130 166310 149820 164860 112140 96315 116570 118090 106260 128170 126040 120060 132100 162610 139760 136670 164300 143830 130460 166470 143220 156550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1980799999.9999998 15307 712 14502 29133;29134 23354;23355;23356 23354 3 9606 Homo sapiens 0.1088612637663573 LATALQK Unmodified 743.45414 0.45413923 1095;1096;3746;3083;2862;3405 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;J3KN67;M1VPF4;A0A2R2Y2Q3;A0A494C0P6;D6R904;A0A494C0G0;H0YL80;P09493-3;D9YZV5;P09493-4;Q15657;P09493-10;A0A0K0K1I0;P09493-8;Q8TCG4;P09493-9;H0YKX5;P09493;D9YZV4;Q6ZN40;A0A0S2Z4G6;P09493-6;C9IZA2;H0YKP3;H7BYY1;B7Z596;F5H7S3;Q1ZYL5;P09493-2;B7Z722;D9YZV7;P09493-5;A0A494BZZ2;H0YKJ4;H0YK48;Q59GR8;A0A024R5W6;P09493-7;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;Q8NAH0;P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A2R8YEU4;Q5TCU3;P07951;V9HW25;CON__Q3SX28;A7XZE4;P07951-2;B4DGC2;P07951-3;B4E3P1 TPM3;DKFZp686J1372;TPM3-ROS1;TPM1;HEL-S-82p;TPM4;HEL-S-108;TPM2;HEL-S-273;TPM2b Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor;Tropomyosin alpha-1 chain;Tropomyosin alpha-4 chain;Tropomyosin beta chain no no 0 0 0 2.67 0.471 1 2 48.381 48.452 3 0.0017795 13711 20230619_1881_Aki_TMTPro18x_K_F2 134.12 62.76 + 777920 569830 744070 752000 947680 1058300 939020 910370 1178300 874480 915310 901390 949830 755550 857550 881760 1083300 960220 718590 523400 761870 748320 968540 1043300 954280 939100 1175500 887250 952840 908970 963940 791250 886140 888420 1033500 911640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278760000 15308 1095;2862;3083;1096;3746;3405 14503 29135;29136;29137 23357;23358;23359 23357 3 9606 Homo sapiens 0.07215032185615655 LATAMQEGEYDAERPPSKPPPVELR Unmodified 2780.3803 0.38032894 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3 DCTN1;DKFZp686I0746 Dynactin subunit 1 yes no 0 0 2 6 0 1 52.49 52.567 4 2.7201E-08 14998 20230619_1886_Aki_TMTPro18x_K_F6 100.62 83.044 30758 24288 29856 32181 26550 29266 35244 33260 35954 37146 39033 43733 42794 33871 33069 47133 44756 45589 28428 22304 30372 31815 28065 29905 35056 33821 36716 37518 40091 43763 43088 35969 34521 47019 42715 43314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57346000 15309 1717 14504 29138 23360 23360 1 9606 Homo sapiens 0.061353989587132673 LATELPDAELRR Unmodified 1382.7518 0.75177781 4313 Q93034;L0L6C1 CUL5 Cullin-5 yes no 0 0 1 4 0 1 47.398 47.44 3 0.036797 12809 20230619_1883_Aki_TMTPro18x_K_F4 39.111 14.319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15310 4313 14505 29139 23361 23361 1 9606 Homo sapiens 0.07571199200720002 LATELYHQK Unmodified 1101.5819 0.58185893 3806 Q06210-2;Q06210;A0A6I8PRN4;A0A6I8PTT9 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 0 7.5 0.5 1 1 45.227 45.284 3 0.00010579 11592 20230619_1888_Aki_TMTPro18x_K_F8 138.08 110.65 81393 59994 77978 77068 82800 86771 84495 86435 106790 90311 99571 101260 98140 82669 89555 109760 109120 96249 75189 55088 79555 76566 85674 87006 85798 88422 107190 91421 102440 101700 99820 87290 92404 109060 104120 91608 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 375000000 15311 3806 14506 29140;29141 23362 23362 1 9606 Homo sapiens 0.035131279889810685 LATGSDDNCAAFFEGPPFK Unmodified 2042.9044 0.90439164 4000 Q59ER5;Q53H17;Q53GN4;A0A8V8TNU2;A0A8V8TNT7;O75083;A0A8V8TP22;A0A8V8TQ74;A0A8V8TQK0;V9HWG7;A0A8V8TP31;D6RD66;B3KXN4 WDR1;HEL-S-52 WD repeat-containing protein 1 yes no 0 0 0 6 0 1 62.489 62.54 3 4.887000000000001E-25 19311 20230619_1886_Aki_TMTPro18x_K_F6 211.29 185.7 92088 80337 89315 89262 85041 104160 96395 93678 106900 122070 95853 101450 124020 107180 105810 142150 111650 126690 85165 73617 90908 89639 89067 103960 96871 97168 108030 121230 100140 104130 124840 112210 108440 141310 106870 120440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232860000 15312 4000 14507 29142 23363 23363 1 9606 Homo sapiens -0.0753443797550517 LATISVNK Unmodified 844.50182 0.5018177 4245 Q8NBM8;D6R9J0 PCYOX1L Prenylcysteine oxidase-like yes no 0 0 0 2.5 0.5 1 1 49.832 49.891 2 7.9886E-06 14075 20230619_1882_Aki_TMTPro18x_K_F3 160.75 115.03 182170 137340 153410 168640 166930 206280 192520 175160 251350 175490 195780 212010 206910 176810 210730 205610 224240 222200 168140 126040 158570 168200 173350 204960 194340 181170 250250 178640 204110 212360 211050 185070 214930 207120 214410 210880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110270000 15313 4245 14508 29143;29144 23364;23365 23365 2 9606 Homo sapiens 0.07334686385809164 LATLLGLQAPPTR Unmodified 1349.8031 0.8030851 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 6.67 0.471 1 2 62.968 63.008 2;3 1.7915E-08 19173 20230619_1887_Aki_TMTPro18x_K_F7 164.04 134.56 107920 89521 104560 104980 94958 115110 111740 115870 123970 134430 115270 123710 132740 105320 118330 147410 126890 142380 99776 82088 106370 104920 99937 115640 112110 118780 125380 134510 119510 125440 134190 111520 121220 147080 121440 135230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 904410000 15314 3152 14509 29145;29146;29147 23366;23367 23367 2 9606 Homo sapiens 0.14217567965465605 LATLNEK Unmodified 787.44397 0.44396847 4279 Q8WUW1;Q8WUW1-2 BRK1 Protein BRICK1 yes no 0 0 0 7 0 1 46.469 46.557 3 0.005278 11986 20230619_1887_Aki_TMTPro18x_K_F7 104.45 12.821 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15315 4279 14510 29148 23368 23368 1 9606 Homo sapiens 0.041744244603819425 LATNAAVTVLR Unmodified 1127.6663 0.66625727 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C2U0 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 4.5 1.12 1 1 1 1 50.728 50.792 2 2.1955E-06 14432 20230619_1882_Aki_TMTPro18x_K_F3 173.28 129.84 539020 440980 457320 474500 503150 513350 483000 503970 571950 594660 572590 544950 635190 538270 541230 611960 620290 625140 497790 404070 472040 477190 518470 516270 491100 517820 578080 594640 589940 555320 641860 559490 556760 614350 592760 593600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4139999999.9999995 15316 3621 14511 29149;29150;29151;29152 23369;23370 23369 2 9606 Homo sapiens 0.1075307880573746 LATNTSAPDLK Unmodified 1129.5979 0.59790293 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;A0A024R2V0;P27816-4;Q86Y04;P27816-5;B5MEG9;H7C4C5;H0Y2V1;F8W9U4;B4DSQ1;Q8NDS5 MAP4;DKFZp547H1810 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 0 6 0 1 47.209 47.29 2 0.003411 12733 20230619_1886_Aki_TMTPro18x_K_F6 109.16 66.336 24746 19518 21127 25548 23209 26119 23270 24189 33404 30270 31139 30901 36482 25072 30598 32314 36454 32737 22849 17921 21819 25304 23977 26322 23774 25009 33367 30294 32280 31144 36750 26467 31547 32376 34797 31103 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11691000 15317 2902 14512 29153 23371 23371 1 9606 Homo sapiens 0.03828789435215185 LATQLTGPVMPVR Unmodified 1381.7752 0.77515579 2040 Q6NZ55;A8K4C8;P26373;P26373-2;O60250 RPL13 60S ribosomal protein L13 yes no 0 0 0 4.5 1.12 1 1 1 1 56.068 56.113 2 3.5715E-15 16620 20230619_1883_Aki_TMTPro18x_K_F4 205.56 167.14 541890 451040 505730 516560 442750 524930 545430 547140 561860 629250 538150 528270 702720 540770 543870 705090 613200 644390 500840 413490 515910 516620 467920 530730 544670 559560 571200 628360 560340 541500 704090 566410 560560 702020 586250 612570 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3084599999.9999995 15318 2040 14513 29154;29155;29156;29157 23372;23373;23374 23374 3 9606 Homo sapiens 0.09953921713690761 LATQLTGPVMPVR Oxidation (M) 1397.7701 0.77007041 2040 Q6NZ55;A8K4C8;P26373;P26373-2;O60250 RPL13 60S ribosomal protein L13 yes no 0 1 0 3.5 0.5 1 1 50.947 50.979 2 0.0046403 14413 20230619_1883_Aki_TMTPro18x_K_F4 75.849 51.999 60235 52091 59543 67981 73506 68453 68880 70610 74991 67061 71291 77623 83596 62523 69296 88693 79008 85150 55712 47810 60787 67345 75021 69263 69917 71902 75914 68282 73895 77839 84200 66402 71362 88446 75543 80890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 283380000 15319 2040 14513 29158;29159 23375;23376 23376 1280 2 9606 Homo sapiens 0.0870961785108193 LATQSNEITIPVTFESR Unmodified 1904.9844 0.98435652 3383 V9HW43;P04792;A0A6Q8PFK8;A0A6Q8PGK1;B4DL87;C9J3N8 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 0 0 0 6.8 0.748 2 2 1 60.597 60.644 2;3 5.7855E-59 18038 20230619_1887_Aki_TMTPro18x_K_F7 364.17 336.4 141550 114930 130680 144870 129330 172880 150720 140390 164540 220710 199200 197690 234020 184740 213620 245120 212360 227670 130790 105470 133760 144160 135290 171880 151180 147810 168540 218010 204290 201300 236640 194260 217690 244280 203300 216370 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3415099999.9999995 15320 3383 14514 29160;29161;29162;29163;29164 23377;23378;23379 23378 3 9606 Homo sapiens 0.06806371690026936 LATTILQHWK Unmodified 1209.687 0.68699271 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5.5 0.5 1 1 58.983 59.042 3 8.9904E-06 17730 20230619_1886_Aki_TMTPro18x_K_F6 154.35 125.83 509690 424960 534490 528760 486190 603200 605290 586680 670850 276540 221820 162630 188070 150720 374180 234270 235630 152120 471540 389890 540270 526530 512470 603650 605150 592260 660530 293330 247300 170340 201930 160310 368770 229960 226210 145660 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 383830000 15321 3758 14515 29165;29166 23380;23381;23382 23382 3 9606 Homo sapiens 0.09053669185414037 LATVLSGACDGEVR Unmodified 1446.7137 0.71367774 801 A0A087WT20;Q9NV06;B3KME9 DCAF13 DDB1- and CUL4-associated factor 13 yes no 0 0 0 5 0 1 55.029 55.096 2 8.0745E-16 15893 20230619_1885_Aki_TMTPro18x_K_F5 200.06 166.68 33603 31596 32116 40537 33042 37027 39607 40932 44741 48426 47871 47785 53334 40424 40702 58257 53020 53933 31089 28986 32817 40150 34433 37797 39718 41749 45440 48504 49193 48309 53636 42903 42388 57957 50616 51269 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13370000 15322 801 14516 29167 23383 23383 1 9606 Homo sapiens 0.008189452237502337 LATVVNDER Unmodified 1015.5298 0.52982336 4090 Q68CN2;Q71SV8;Q9HCS7 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 yes no 0 0 0 3 0 1 43.576 43.646 2 0.074048 11308 20230619_1882_Aki_TMTPro18x_K_F3 63.283 41.777 114920 95568 119690 112710 126060 140260 139630 120350 194530 109600 120550 120840 113200 111130 121480 114590 127230 110960 106310 87637 121260 112800 130880 139290 141580 124100 191810 111910 126860 121850 116310 115050 123660 114950 121570 105490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124700000 15323 4090 14517 29168 23384 23384 1 9606 Homo sapiens 0.022679645752305078 LAVAGEDAR Unmodified 900.46649 0.46649483 974 P57737-3;A0A0A6YYL4;P57737;P57737-4;P57737-2;B3KSY4;B3KUH7;B4DKU9 CORO7;CORO7-PAM16;hCG_1787779 Coronin-7;Coronin yes no 0 0 0 2 0 1 38.853 38.919 2 0.00012497 9316 20230619_1881_Aki_TMTPro18x_K_F2 151.56 102.77 150540 107670 150700 161500 201110 194180 182080 166890 219290 207650 232420 214630 223970 191520 203630 158270 263630 225450 139090 99051 153870 159010 204210 193270 185810 173500 221810 207960 237330 216680 227930 196690 210450 163520 251390 213560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139900000 15324 974 14518 29169 23385 23385 1 9606 Homo sapiens 0.012280238579933211 LAVDEEENADNNTK Unmodified 1560.6904 0.69035934 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;A0A8V8TLK7;A0A8V8TND0;A0A8V8TLK4;F8WBE5 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 1 0 1 44.457 44.457 2 1.7144E-83 12046 20230619_1880_Aki_TMTPro18x_K_F1 369.63 321.35 53215 38418 46488 41122 43023 49019 38481 36313 50691 57103 56923 51696 59537 52313 45003 55179 68194 56259 49119 35218 47686 41432 44897 48699 39471 38535 51246 56450 58164 52744 60021 54097 47347 55441 64941 53468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50108000 15325 1817 14519 29170 23386 23386 1 9606 Homo sapiens -0.0675582207984462 LAVEALSSLDGDLAGR Unmodified 1585.8312 0.83115034 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;G3V4N7 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 0 5 0.707 1 2 1 63.862 63.895 2;3 1.266E-49 19859 20230619_1886_Aki_TMTPro18x_K_F6 258.09 223.72 1074900 1109100 1238700 1432400 492130 1191500 1174800 1176500 1169700 1432500 1770100 1568200 1791500 1189700 1549100 2003000 1538500 1724000 996810 1017300 1235600 1416600 592910 1221100 1146100 1210600 1215500 1437300 1787200 1575100 1813400 1283600 1581600 1982500 1473400 1639700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8874900000 15326 3441 14520 29171;29172;29173;29174 23387;23388;23389 23389 3 9606 Homo sapiens 0.06166801364224739 LAVEILNK Unmodified 898.54877 0.54876789 1711 A0A7P0TAL9;A0A7P0TBA9;B7ZKK7;P19525-2;P19525;Q8IW76;A0A7P0Z4M0;Q05CP4;Q6PK38 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes no 0 0 0 4.5 3.5 1 1 58.853 58.894 2;3 0.00038221 18058 20230619_1880_Aki_TMTPro18x_K_F1 111.82 57.266 65118 64462 57880 50916 61245 56831 64777 50296 68278 73065 56890 69740 76348 58212 66134 76265 85953 72620 60237 58890 59393 52700 63371 56980 65187 52480 69002 72523 59855 70492 76805 61413 68569 76116 81956 69062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143750000 15327 1711 14521 29175;29176 23390;23391 23390 2 9606 Homo sapiens 0.09543545936958253 LAVLITNSNVR Unmodified 1198.7034 0.70337105 3624 V9HWE7;P51570;Q6ZP37;Q71UH7;C8CHJ6 HEL-S-19;GALK1;GALK Galactokinase yes no 0 0 0 5 0 2 55.813 55.877 2;3 1.5585E-08 16224 20230619_1885_Aki_TMTPro18x_K_F5 182.39 158.19 77383 75070 70127 83815 90201 100720 90290 82875 104950 83742 86164 80634 82536 71386 90876 95311 95100 86896 71582 68769 72233 84135 92147 100180 91441 85945 105290 84555 89120 81738 84775 75193 92517 94913 90894 82653 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55131000 15328 3624 14522 29177;29178 23392;23393 23393 2 9606 Homo sapiens 0.11196750351496121 LAVNMVP Unmodified 742.40475 0.40474619 3201 M0R2D3 TUBB4A yes yes 0 0 0 7 0.816 1 1 1 61.184 61.226 2 0.075191 18294 20230619_1887_Aki_TMTPro18x_K_F7 74.849 47.532 47451 38965 66005 57175 31195 29719 48638 39328 30938 255550 242590 317820 342500 296930 177460 280560 287660 422520 44020 35817 64915 55907 35483 32427 47696 45338 41906 248190 243600 318610 338530 306310 190040 289800 275100 399310 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 891710000 15329 3201 14523 29179;29180;29181 23394;23395 23394 2 9606 Homo sapiens 0.02324000905161938 LAVNMVPFPR Oxidation (M) 1158.6219 0.62194961 3748;1486;3381;983;1424;3870;2562;3176;3970 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B4DMU8;B4DXZ5;Q96B85;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DJ43;B4DE77;B4DFH6;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB3;TUBB2B;DKFZp566F223;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB8;TUBB4A;TUBB6 Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 1 0 4 0.816 1 1 1 54.613 54.655 2;3 0.0013096 15950 20230619_1885_Aki_TMTPro18x_K_F5 87.913 61.975 724890 609440 597560 699580 700430 730240 679350 696440 812180 373500 375020 316180 322770 294290 535070 412320 398240 300380 669430 558700 619670 699530 719020 735510 690080 705330 801110 393840 403140 323500 341440 310300 532100 406630 381670 286850 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3990599999.9999995 15330 983;1424;1486;3748;3870;3970;3381;2562;3176 14524 29182;29183;29184 23396;23397;23398;23399 23398 554 4 9606 Homo sapiens 0.0489835138791932 LAVNMVPFPR Unmodified 1142.627 0.62703499 3748;1486;3381;983;1424;3870;2562;3176;3970 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B4DMU8;B4DXZ5;Q96B85;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q3ZCM7;A0A075B736;Q5SQY0;A0A183YE00;P04350;B4DJ43;B4DE77;B4DFH6;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB3;TUBB2B;DKFZp566F223;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB8;TUBB4A;TUBB6 Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 0 0 5 0.816 1 1 1 60.395 60.432 2 3.4328E-05 18028 20230619_1885_Aki_TMTPro18x_K_F5 179.21 147.84 2992000 2452900 2482800 2473100 2110700 3074100 2557900 2734000 3100700 1382000 1102700 946270 1029600 933460 1963000 1429400 1360900 985510 2762800 2246400 2559500 2505400 2241900 3053900 2569700 2779700 3043100 1459300 1223400 982200 1098600 988980 1943400 1405500 1305300 942120 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 14469000000 15331 983;1424;1486;3748;3870;3970;3381;2562;3176 14524 29185;29186;29187 23400;23401;23402 23401 3 9606 Homo sapiens 0.06142655250550888 LAVQQVEEAQQLR Unmodified 1510.8104 0.81035532 2991 F8W785;O00461 GOLIM4 Golgi integral membrane protein 4 yes no 0 0 0 4.5 0.5 1 1 51.205 51.232 2 6.1561E-15 14544 20230619_1883_Aki_TMTPro18x_K_F4 234.39 180.42 42538 36498 42767 39900 45780 48495 56076 50719 61794 60242 65240 74901 66327 56698 68421 67979 68187 73736 39347 33442 43461 40158 47568 48455 56102 51922 62758 60808 66904 74718 67756 59676 69525 68459 65281 69953 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35479000 15332 2991 14525 29188;29189 23403;23404 23403 2 9606 Homo sapiens 0.07538255775216385 LAVVDPLFGMQPIR Unmodified 1554.8592 0.85921977 3409 P08243-2;P08243;F8WEJ5;C9J057;C9JT45;C9JM09;C9JLN6 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 3 0 1 64.245 64.277 3 1.7149E-07 20253 20230619_1882_Aki_TMTPro18x_K_F3 113.24 91.868 16349 10948 14013 16620 13934 14810 10035 13177 16719 17670 22715 23476 16818 17780 21118 20933 18855 23020 15083 10077 14436 16283 14393 15074 10573 13697 16889 17791 22773 23374 17573 18677 21275 21104 18091 21827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106520000 15333 3409 14526 29190 23405 23405 1 9606 Homo sapiens 0.10398452810636627 LAVYIDK Unmodified 820.46945 0.46945494 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 LMNB1 Lamin-B1 yes no 0 0 0 7.5 0.5 1 1 55.157 55.221 2 0.0095203 15779 20230619_1888_Aki_TMTPro18x_K_F8 123.96 52.929 854380 722300 743750 828390 814750 997820 627730 670420 812710 1027400 1091900 1096500 710640 1357700 441510 1719700 472770 1167700 789330 662140 766140 829860 837170 988690 650270 717120 829390 1021900 1089700 1120300 729570 1406400 463100 1687700 456850 1112400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1521699999.9999998 15334 3482 14527 29191;29192 23406;23407 23407 2 9606 Homo sapiens 0.05203898982813371 LAVYIDR Unmodified 848.4756 0.47560295 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;Q8N519;A0A6Q8PF80;A0A6Q8PGH0;A0A6Q8PF59;A0A6Q8PFM1;W5X314 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 7 0.816 1 1 1 50.281 50.36 2 0.0025209 14031 20230619_1886_Aki_TMTPro18x_K_F6 124.37 52.424 1215100 976670 1009400 1313600 1666800 1827600 1790600 1815400 1947300 1613000 1637600 1667400 1740400 1453300 1645200 1699200 1695300 1759300 1121900 896940 1054700 1305000 1682900 1808300 1801800 1849200 1962000 1643000 1699700 1683200 1768400 1519500 1677700 1707000 1622000 1670100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5274500000 15335 1428 14528 29193;29194;29195 23408;23409;23410 23408 3 9606 Homo sapiens 0.04530417214334648 LAVYQAGASEGAER Unmodified 1420.6947 0.69465686 2790 CON__Q03247 yes yes 0 0 0 3.5 0.5 1 1 44.235 44.294 2 2.0211E-06 11413 20230619_1883_Aki_TMTPro18x_K_F4 134.13 115.82 + 31597 34916 51349 45723 66701 66102 49394 49110 58250 80379 131670 160410 83676 93430 130310 108830 138950 200740 29432 32023 50701 45546 67503 64929 51157 52211 61736 81911 129790 156830 89276 99379 132070 114280 133290 189460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116090000 15336 2790 14529 29196;29197 23411 23411 1 9606 Homo sapiens 0.0011373192437531543 LAWEQQEPGER Unmodified 1341.6313 0.63132832 2320 B2RDN4;Q14137;A8K3R2;B4DEN9;Q14137-2;Q4G0D9;Q6DKJ9 BOP1 Ribosome biogenesis protein BOP1 yes no 0 0 0 2 0 1 46.532 46.611 2 9.782E-09 12867 20230619_1881_Aki_TMTPro18x_K_F2 183.72 170.14 78313 61389 71821 79071 76124 91450 90368 83001 108940 94925 90950 89800 109570 84120 91880 98188 95243 90475 72345 56357 73626 78547 79207 91316 90824 85710 109200 95190 94960 91204 110340 87742 93957 98007 91062 86033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61084000 15337 2320 14530 29198 23412 23412 1 9606 Homo sapiens -0.025822087928645487 LAYCQSEELRR Unmodified 1423.6878 0.68779734 1582 A8K7A0;A0A5F9ZHU7;P49643;A0A024RD43;A0A5F9ZHR0;A0A024RD63;P49643-2 PRIM2;PRIM2A DNA primase large subunit yes no 0 0 1 6 0 1 38.77 38.853 3 2.3282E-06 9064 20230619_1886_Aki_TMTPro18x_K_F6 163.83 124.56 58301 44642 50145 50439 46345 54911 54106 56545 87002 66325 61762 53476 71568 53465 50775 77604 78973 65148 53825 40934 51564 50546 48763 55228 55107 57892 85716 66174 64889 54932 71739 56458 53696 76815 75193 62061 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65199000 15338 1582 14531 29199 23413 23413 1 9606 Homo sapiens -0.007099042278696288 LAYELYTEALGIDPNNIK Unmodified 2036.0466 0.046622427 1609;2515 B4DKK3;Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2;K7ER44;K7EPP7 DNAJC7 DnaJ homolog subfamily C member 7 no no 0 0 0 7.5 0.5 1 1 65.562 65.585 3 1.0763E-18 20316 20230619_1887_Aki_TMTPro18x_K_F7 177.88 153.34 25217 21701 24603 25201 26271 29095 27947 27727 26167 31847 30281 26766 32722 28309 27994 31823 29929 30330 23321 19895 25073 25220 27192 29099 28036 28524 26958 31802 30959 27467 33094 29339 28677 31831 28620 28822 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139650000 15339 2515;1609 14532 29200;29201 23414 23414 1 9606 Homo sapiens 0.07004098038396478 LAYFNDIAVGAVCCR Unmodified 1727.8123 0.81234593 2895 E7EQ69;Q9GZZ1 NAA50 N-alpha-acetyltransferase 50 yes no 0 0 0 2 0 1 62.328 62.338 3 0.0010083 19659 20230619_1881_Aki_TMTPro18x_K_F2 73.722 65.998 44918 39625 47567 52444 47919 43782 48053 53278 55414 58874 60225 54625 72579 61756 57291 81265 73893 94912 41575 36372 48119 51800 49675 45171 48706 53917 56269 59067 62055 55967 72972 64538 59583 82022 70685 89926 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45214000 15340 2895 14533 29202 23415 23415 1 9606 Homo sapiens -0.02244774802829852 LAYIAHPK Unmodified 911.52289 0.52288749 221 A0A024R326;Q6IPI1;A0A3B3ITT5;P47914 RPL29 60S ribosomal protein L29 yes no 0 0 0 3.4 1.02 1 2 1 1 43.858 43.927 2;3 0.0014372 11317 20230619_1882_Aki_TMTPro18x_K_F3 104.45 69.624 1728000 1424100 1732900 1601400 1762300 2007500 1942900 1869400 1982500 1307100 1441800 1061500 1379300 1077200 1329600 1518400 1598000 930240 1598000 1305400 1759700 1608900 1833200 1996000 1949600 1904200 1993500 1345000 1499700 1092100 1407300 1133700 1368500 1485500 1521800 892230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2171700000 15341 221 14534 29203;29204;29205;29206;29207 23416;23417;23418;23419 23418 4 9606 Homo sapiens 0.06358696485324344 LAYINPDLALEEK Unmodified 1487.7872 0.78716026 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 4.5 1.12 1 1 1 1 62.172 62.205 3 2.2868E-05 19258 20230619_1883_Aki_TMTPro18x_K_F4 117.79 101.9 61009 55273 46668 47307 48757 50410 53197 48013 63261 73684 68112 57489 80528 53808 62641 83314 70416 71567 56341 50537 48628 48529 50622 50754 53687 49903 64147 72593 70107 59026 80843 57257 64557 82522 67307 68095 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2355800000 15342 2088 14535 29208;29209;29210;29211 23420 23420 1 9606 Homo sapiens 0.0627781693790439 LAYPETKPEVR Unmodified 1301.698 0.69795133 2488 B4DHJ9;Q15386;Q15386-2 UBE3C Ubiquitin-protein ligase E3C yes no 0 0 1 7 0 1 44.202 44.285 3 0.0030695 11054 20230619_1887_Aki_TMTPro18x_K_F7 78.548 52.418 57681 43084 59872 60251 69003 68013 68719 69520 84645 83130 75372 71535 94874 79437 65166 104820 232610 91241 53324 39596 60769 59535 70892 68229 69795 71258 85019 82958 78561 73479 95034 83025 76169 104050 219960 87323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172570000 15343 2488 14536 29212 23421 23421 1 9606 Homo sapiens 0.05917026769020595 LAYQELQIDR Unmodified 1247.651 0.65100113 1020 Q8N6H7;G5E9L0;A0A0D9SF70;E9PN48;E9PQP3;B3KV00;B4E327;H0YDN9;Q8N6H7-3;Q8N6H7-2;E9PIY6 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 0 0 0 5 0 1 52.617 52.689 2 0.0019356 14936 20230619_1885_Aki_TMTPro18x_K_F5 116.13 90.013 46733 38851 43093 41077 43144 52810 51396 51260 56244 51429 55379 50944 61832 54848 52198 55949 58844 64217 43190 35591 44078 41483 45080 52474 51496 52463 56978 51972 57108 51898 62461 56517 53635 56661 56274 60886 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81942000 15344 1020 14537 29213 23422 23422 1 9606 Homo sapiens 0.03708167217905611 LAYQVLAEK Unmodified 1033.5808 0.5807963 4409 Q9BPX3;Q6NUR1 NCAPG Condensin complex subunit 3 yes no 0 0 0 1 0 1 57.391 57.391 3 0.025804 17431 20230619_1880_Aki_TMTPro18x_K_F1 52.579 9.2709 72032 56312 57680 70080 53462 65772 66443 67330 72884 82986 78593 73656 81752 71697 69549 92562 89296 89939 66477 51679 59806 69577 56305 66860 66456 69101 74170 82730 80464 75165 82790 75127 72155 92462 85251 85450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32877000 15345 4409 14538 29214 23423 23423 1 9606 Homo sapiens 0.06534913620089355 LAYRPPK Unmodified 843.49667 0.49667274 3411 Q8TBT6;P08574 CYC1 Cytochrome c1, heme protein, mitochondrial yes no 0 0 1 5 0.816 1 1 1 39.699 39.772 3 0.013983 9383 20230619_1885_Aki_TMTPro18x_K_F5 92.319 41.353 494300 393720 458960 527990 685750 668590 675390 642370 755400 524490 687340 722100 778010 637370 679430 790620 863960 772030 456720 361580 472990 523850 693450 664870 683690 655010 761520 542850 712630 721780 786570 668260 703360 790700 824210 733820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 580590000 15346 3411 14539 29215;29216;29217 23424;23425 23425 2 9606 Homo sapiens 0.06866427313843815 LCASGAGATPDTAIEEIK Unmodified 1802.872 0.87202888 3641 P53384-2;P53384;I3L531 NUBP1 Cytosolic Fe-S cluster assembly factor NUBP1 yes no 0 0 0 5 0 1 56.28 56.341 3 0.040513 16392 20230619_1885_Aki_TMTPro18x_K_F5 53.362 42.574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15347 3641 14540 29218 23426 23426 1 9606 Homo sapiens 0.0027077462154920795 LCCPATAPQEAPAPEGR Unmodified 1823.8295 0.82945256 3118 M0QXZ5;I6L9C8;Q96B54 ZNF428 Zinc finger protein 428 yes no 0 0 0 3.5 0.5 1 1 42.705 42.749 3 2.2965E-06 10714 20230619_1883_Aki_TMTPro18x_K_F4 108.34 102.95 29912 22169 22078 27290 30999 26074 31827 31815 40207 28694 32583 31239 40399 29766 31968 35919 37652 40997 27583 20347 23237 27126 31482 26612 32283 32024 40152 29263 34115 31573 40558 31109 32991 36266 35994 38873 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81385000 15348 3118 14541 29219;29220 23427;23428 23428 2 9606 Homo sapiens -0.04950898987681285 LCDAVAVLLNMR Unmodified 1373.7159 0.71592635 1440 B2R694;A0A384MTQ5;P48449-3;P48449;A0A0G2JQD0;P48449-2 LSS Terpene cyclase/mutase family member;Lanosterol synthase yes no 0 0 0 5 0 1 65.792 65.836 3 1.1955E-05 20518 20230619_1885_Aki_TMTPro18x_K_F5 109.24 77.174 8273.2 6544.6 8257 7560.7 6685.5 7369.4 9003 6425.1 9293.3 8729.6 9337.4 7964.7 8635.6 5617.8 5910.5 9243.7 9517.7 8974.7 7648.3 6001.4 8361.8 7553 7128.8 7448 8948.6 6700.2 9448.8 8677.3 9533.8 8046.2 8698.1 6072.8 6275.6 9204.1 9067.8 8529 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12536000 15349 1440 14542 29221 23429 23429 1 9606 Homo sapiens 0.04401702427890086 LCDEQLSSQSHYDFGLR Unmodified 2053.9164 0.91635331 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4.5 0.5 1 1 51.922 51.973 3 0.00036408 14571 20230619_1885_Aki_TMTPro18x_K_F5 51.535 46.533 49000 36391 46117 53652 53365 54388 56780 50423 59479 67223 68018 69383 61069 52058 63774 62069 70516 65312 45261 33466 47239 52744 54912 54851 57128 52263 60820 67082 69103 69713 62679 54804 65163 62406 67368 62018 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78722000 15350 3881 14543 29222;29223 23430 23430 1 9606 Homo sapiens -0.06844821232243703 LCDFGVSGQLIDSMANSFVGTR Unmodified 2373.1093 0.10931581 1774;3554 A0A8I5KVF6;A0A8I5QJL9;A0A8I5QJ96;A0A8I5KYS7;B4DFY5;A4QPA9;A0A8I5KYB4;Q02750-2;Q02750;A0A8I5KRX5;A0A8I5KXN4;H3BRW9;P36507;Q7Z370;B3KS97 MAP2K1;MAP2K2;DKFZp686L02273 Dual specificity mitogen-activated protein kinase kinase 1;Dual specificity mitogen-activated protein kinase kinase 2 no no 0 0 0 3 0 1 65.855 65.889 3 5.559E-05 20909 20230619_1882_Aki_TMTPro18x_K_F3 77.576 64.647 10735 7616.1 8583.4 10874 9353.3 9068.1 11054 11722 10867 12645 13245 15525 16208 13094 11984 16033 14115 18506 9901.5 7002.6 8922.9 10688 9692.4 9368.2 11044 11818 11187 12809 13620 15545 16242 13748 12402 16189 13515 17535 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9666900 15351 1774;3554 14544 29224 23431 23431 1 9606 Homo sapiens -0.0223144722735924 LCDFNPK Unmodified 892.41129 0.41128813 3421 P09496-2;P09496-4;P09496-3;P09496;C9J8P9;P09496-5 CLTA Clathrin light chain A yes no 0 0 0 7 0.816 1 1 1 49.807 49.885 2 0.06021 13546 20230619_1887_Aki_TMTPro18x_K_F7 81.613 39.384 697970 564090 598590 662540 665330 707460 699630 724030 841260 815750 816700 879790 915210 689610 743590 1032200 986870 884800 644590 517310 617680 661720 686950 712550 707880 740910 848270 821350 843660 883990 922480 735840 774140 1022600 941170 842320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 621060000 15352 3421 14545 29225;29226;29227 23432 23432 1 9606 Homo sapiens -0.0392210593412301 LCDSYEIRPGK Unmodified 1336.6445 0.64453555 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PEX7 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 0 0 1 7.33 0.471 2 1 45.057 45.123 3;4 2.5739E-06 11333 20230619_1887_Aki_TMTPro18x_K_F7 134.2 111.28 2082100 1519300 1948800 2089900 1876600 2018600 2158300 2087900 2168000 2472600 2623400 2719300 2860200 2305400 2460000 3145500 2887400 2849400 1922900 1396200 1990500 2062500 1961900 2048100 2160900 2139100 2227700 2484800 2681100 2736200 2891900 2436000 2535900 3128800 2758300 2709600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4008499999.9999995 15353 3254 14546 29228;29229;29230 23433;23434;23435;23436 23433 4 9606 Homo sapiens -0.01032094005131512 LCEAICPAQAITIEAEPR Unmodified 2040.9972 0.99724617 344 E9PKH6;A0A024R5K3;E9PPW7;Q53G17;O00217 NDUFS8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes no 0 0 0 4 0 1 60.343 60.346 3 1.0514E-06 18468 20230619_1883_Aki_TMTPro18x_K_F4 110.37 91.911 20438 19275 17114 19618 20458 20449 24783 20792 20104 25211 22830 20471 20626 20095 24780 25383 23259 26103 18891 17645 17729 19804 21075 20641 24582 21343 20880 25089 23199 20992 21334 21017 25046 25461 22288 24775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72476000 15354 344 14547 29231 23437 23437 1 9606 Homo sapiens 0.018387434862916052 LCEFNCNIR Unmodified 1224.538 0.53796198 4499 Q9H269;Q5JUA9;Q9H269-2;Q5JUB0 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes no 0 0 0 7 0 1 47.851 47.939 2 0.007919 12659 20230619_1887_Aki_TMTPro18x_K_F7 88.921 77.073 112640 93163 91633 112530 153390 177360 137560 130790 222550 78553 77300 72023 86242 67028 96490 83761 93986 88479 104000 85453 95912 112830 154300 173310 142020 135420 215680 82353 86515 73328 88258 70242 97723 84207 89911 84008 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58194000 15355 4499 14548 29232 23438 23438 1 9606 Homo sapiens -0.06532547771303143 LCEGFNEVLK Unmodified 1207.5907 0.59070906 4758 Q9Y6H1 CHCHD2 Coiled-coil-helix-coiled-coil-helix domain-containing protein 2 yes yes 0 0 0 5.71 1.03 1 2 2 2 57.665 57.717 2;3 2.2193E-05 16945 20230619_1885_Aki_TMTPro18x_K_F5 123.75 78.59 309840 237890 255550 323820 267590 335910 316060 329300 388150 393750 410520 460900 427300 384190 434180 426100 421210 490550 285980 218540 264780 319970 278860 338440 318120 338610 392290 396500 421290 462010 436000 401010 440640 431180 403620 464990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1629799999.9999998 15356 4758 14549 29233;29234;29235;29236;29237;29238;29239 23439;23440 23439 2 9606 Homo sapiens -0.004782664368576661 LCELLSAQF Unmodified 1079.5321 0.53213155 1042 O94973-2;O94973;B7Z5S9;A0A0G2JS82;B7Z1Q4;B3KMI7;A0A8I5KY83 AP2A2 AP-2 complex subunit alpha-2 yes no 0 0 0 7.5 0.5 1 1 66.055 66.077 2 0.0098869 20554 20230619_1887_Aki_TMTPro18x_K_F7 85.357 72.567 25029 20232 20097 21922 18814 20386 25533 28554 24332 16022 18872 18093 20379 16780 25446 21289 19638 16901 23104 18540 20819 21999 19824 20922 25322 28264 24604 16926 19699 18257 20984 17584 25441 21092 18827 16110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 90077000 15357 1042 14550 29240;29241 23441;23442 23441 2 9606 Homo sapiens -0.004453230113085738 LCENCPSCPR Unmodified 1291.5108 0.51076096 1629 A0A6Q8PH99;A0A6Q8PHG6;A0A6Q8PFV4;A0A8F5XQU3;H0YJZ6;A0A8Q3WLJ5;A0A8Q3SJI0;A0A7I2YBM0;A0A8Q3WLH8;Q9UPY3-2;Q9UPY3 DICER1 Endoribonuclease Dicer yes no 0 0 0 4 0 1 35.692 35.74 2 0.0015688 7831 20230619_1883_Aki_TMTPro18x_K_F4 105.2 94.963 12541 6495 11665 10845 8363 12227 11657 11268 14599 13896 16229 14379 18519 11944 10504 13220 20715 14756 11563 5993.1 11872 10609 9066.8 12223 11658 11649 14765 13920 16648 14495 18429 12489 11397 13343 19680 14021 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7550200 15358 1629 14551 29242 23443 23443 1 9606 Homo sapiens -0.12333399374006149 LCEQLSTVIPNSHVYYR Unmodified 2078.0255 0.025509829 4539 Q9H9Y2 RPF1 Ribosome production factor 1 yes yes 0 0 0 2 0 1 55.292 55.312 3 1.1205E-06 16713 20230619_1881_Aki_TMTPro18x_K_F2 109.38 90.548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15359 4539 14552 29243 23444 23444 1 9606 Homo sapiens 0.029618094578381715 LCESNRVDAK Unmodified 1190.5714 0.5713706 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;B3KMI9 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 1 5 0 1 36.524 36.616 3 0.041101 8136 20230619_1885_Aki_TMTPro18x_K_F5 56.359 40.82 41952 28508 51198 44791 73768 61712 47391 61662 48967 45156 68020 59352 56110 44541 66150 36181 68760 52710 38821 26247 51502 44117 73947 61140 49440 62501 50540 46928 68333 59124 58087 46022 67056 37523 65653 49948 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50547000 15360 4661 14553 29244 23445 23445 1 9606 Homo sapiens -0.016292227277517668 LCFSTAQHAS Unmodified 1120.4971 0.49714303 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 0 0 7 0 1 43.728 43.807 2 0.0044151 10829 20230619_1887_Aki_TMTPro18x_K_F7 93.701 86.133 40781 41990 44790 48464 49537 53927 49585 50056 42610 25745 30674 27895 24604 21432 33845 28570 34596 29030 37801 38470 45259 48489 51036 54033 49787 50767 43271 27403 31779 28041 25756 22695 34264 28639 33055 27589 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26703000 15361 1455;1520 14554 29245 23446 23446 1 9606 Homo sapiens -0.05828565819274445 LCGDTSLNNMQR Oxidation (M) 1423.6184 0.61839715 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6 IPO5;RANBP5 Importin-5 yes no 0 1 0 4.5 0.5 1 1 38.961 39.027 3 7.6099E-05 9119 20230619_1885_Aki_TMTPro18x_K_F5 111.26 99.198 51684 39611 51323 52387 65098 65222 58470 55154 71691 54848 60225 63184 65097 56516 65155 57324 78944 69634 47769 36378 52369 52012 66317 64759 59734 57044 71795 55749 62576 63526 66317 58572 66961 58312 75336 66042 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148260000 15362 782 14555 29246;29247 23447 23447 474 1 9606 Homo sapiens -0.07646731238946813 LCGDTSLNNMQR Unmodified 1407.6235 0.62348253 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6 IPO5;RANBP5 Importin-5 yes no 0 0 0 6 0 1 43.847 43.938 2 8.368000000000001E-41 11189 20230619_1886_Aki_TMTPro18x_K_F6 312.19 281.51 79047 64842 72513 67777 59697 62362 73480 68822 72906 92712 84660 77402 104780 81634 68495 111290 109250 93021 73044 59399 73975 68201 63362 63673 73306 70510 74892 91922 87101 79479 104560 85662 72766 110200 104030 88605 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208720000 15363 782 14555 29248 23448 23448 1 9606 Homo sapiens -0.06402427376315245 LCGEVKPK Unmodified 929.50044 0.50043749 4170;3047 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9;H0YHT2;H0YIM6;Q68D13;H0YI78 KIF21A;DKFZp779C159 Kinesin-like protein KIF21A;Kinesin-like protein no no 0 0 1 8 0 1 41.546 41.543 3 0.069893 10120 20230619_1888_Aki_TMTPro18x_K_F8 52.255 12.546 77175 44460 88290 99172 107400 113060 92087 91951 93305 93152 123600 136930 112640 99686 113050 68083 134310 115650 71315 41186 89102 95703 109540 112700 93831 95475 96178 95395 125020 135610 115350 102410 115850 71757 128170 109410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49855000 15364 4170;3047 14556 29249 23449 23449 1 9606 Homo sapiens 0.03286729025398927 LCGLFYTSEETAK Unmodified 1517.7072 0.70719538 2628 B4DZ92;Q5T481 RBM20 RNA-binding protein 20 yes no 0 0 0 7 0 1 60.528 60.571 3 0.011618 18025 20230619_1887_Aki_TMTPro18x_K_F7 65.172 51.759 53389 45158 50964 59702 55858 59984 62907 65586 69929 67407 71479 71486 70124 59705 75792 74469 75646 77000 49359 41456 52102 59093 57814 60759 63243 66661 70899 68138 73228 72000 71881 62760 76956 74745 72388 73103 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29573000 15365 2628 14557 29250 23450 23450 1 9606 Homo sapiens -0.030949927275969458 LCGPYEK Unmodified 865.40039 0.4003891 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 6.5 0.5 1 1 45.234 45.321 2 0.0092624 11431 20230619_1887_Aki_TMTPro18x_K_F7 119.56 36.27 389250 287460 348280 372620 362320 413740 414470 400470 496420 523340 493650 469290 585170 415480 396210 553050 581470 483020 359390 263980 357600 369830 376940 414910 417380 413280 501320 520660 510210 477120 584960 437970 417260 549180 553870 459880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 376460000 15366 769 14558 29251;29252 23451;23452 23452 2 9606 Homo sapiens -0.03769508308403147 LCGTFLGGPKPPQR Unmodified 1526.8028 0.80276752 226 P07858;E9PHZ5;A0A024R374;A8K2H4;B4DL49;A0A7P0NGZ6;A0A7I2YQK9;E9PQM1;A0A7I2V440;E9PR21;E9PSG5;A0A7I2V4Z9;E9PLY3;A0A7I2V4S6;E9PKQ7;E9PNL5;E9PCB3;Q5HYG5;A0A7I2V2J1;A0A7I2V302;E9PS78 CTSB;DKFZp686N0152 Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes no 0 0 1 6 0 1 49.279 49.357 3 0.00012077 13594 20230619_1886_Aki_TMTPro18x_K_F6 96.464 66.528 173340 128540 176040 169510 142250 193910 198370 179510 235300 204840 182720 189320 226620 160070 188700 234120 241280 223520 160210 118060 178130 168150 152250 193780 197840 185090 235500 205270 191900 191940 227970 170160 195690 233330 230220 212470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79368000 15367 226 14559 29253 23453 23453 1 9606 Homo sapiens 0.06043824973949086 LCHNVGYK Unmodified 989.47529 0.47528537 2157 Q05DS5;A8KAM5;Q8N474 SFRP1 Secreted frizzled-related protein 1 yes no 0 0 0 1.5 0.5 1 1 37.637 37.667 3 0.0011115 9060 20230619_1880_Aki_TMTPro18x_K_F1 119.29 80.328 42416 26221 49168 33714 53903 57952 50356 55024 81539 75644 103640 124430 82945 74526 85961 63990 102410 96934 39212 24096 49359 33782 55550 56693 51974 56934 82105 76808 104520 122250 85479 77949 88138 66403 97790 91739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113610000 15368 2157 14560 29254;29255 23454 23454 1 9606 Homo sapiens -0.019873257771678254 LCIEVTPQSK Unmodified 1173.6064 0.60635913 3692 P61221;D6R9I9;D6RGF4 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 0 0 6.5 0.5 1 1 52.13 52.205 3 0.0019151 14513 20230619_1887_Aki_TMTPro18x_K_F7 86.18 66.394 346980 335730 281800 326880 330190 442890 418070 333350 524540 362640 347830 312470 335890 251390 386430 389050 350540 396350 320710 307190 292870 332410 342420 436520 419200 349070 520750 363880 364560 317630 345420 268860 390120 389090 336060 376210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 691600000 15369 3692 14561 29256;29257 23455 23455 1 9606 Homo sapiens 0.026500200802047402 LCLHNLPK Unmodified 993.54297 0.54297101 430 A0A024R753;Q9NW13;Q9NW13-2 RBM28 RNA-binding protein 28 yes no 0 0 0 3 0 1 45.904 45.98 3 0.0012104 12262 20230619_1882_Aki_TMTPro18x_K_F3 116.9 76.472 132900 103130 125400 153380 155980 170760 165730 159520 175350 170780 146960 148010 173700 142780 149940 202330 176300 160700 122790 94832 128650 150890 159850 171040 166780 164050 177080 171330 153310 151190 175310 150590 154620 199880 168320 153130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194290000 15370 430 14562 29258 23456 23456 1 9606 Homo sapiens 0.04594124153629764 LCLISTFLEDGIR Unmodified 1535.8018 0.80176447 3239 Q5T8U5;Q5T8U7;O15260-2;O15260;B7Z605;B7Z8F3;B7Z7A8;O15260-3 SURF4 Surfeit locus protein 4 yes no 0 0 0 2 0 1 66.169 66.176 2 9.2911E-05 21272 20230619_1881_Aki_TMTPro18x_K_F2 138.25 101.85 22969 15923 18529 19617 15381 19604 23253 21954 26967 21165 20750 21654 27763 22160 20045 31583 24704 28759 21184 14619 19158 19513 16471 19871 23095 22249 26999 21460 21889 22002 27743 23343 20842 31390 23620 27330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13856000 15371 3239 14563 29259 23457;23458 23457 2 9606 Homo sapiens 0.0552956581439048 LCLNICVGESGDR Unmodified 1491.681 0.68099741 3733 Q5VVC8;Q08ES8;Q5VVD0;P62913-2;P62913 RPL11 60S ribosomal protein L11 yes no 0 0 0 7 0 1 55.389 55.45 2 2.4136E-15 15940 20230619_1887_Aki_TMTPro18x_K_F7 209.8 170.49 59356 47118 48766 50484 45033 53319 53296 53289 63895 56406 53731 55865 62875 58752 42969 74831 66506 69163 54794 43178 50376 50772 47364 53712 53589 54527 64085 56850 55997 56870 63003 61329 45521 74524 63423 65741 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154750000 15372 3733 14564 29260 23459 23459 1 9606 Homo sapiens -0.0451758517071994 LCLQQGQLCEPLPSLAESR Unmodified 2198.0824 0.082372781 4137 Q6XQN6;Q6XQN6-2;G5E977 NAPRT Nicotinate phosphoribosyltransferase yes no 0 0 0 7 0 1 60.872 60.914 3 1.22E-10 18189 20230619_1887_Aki_TMTPro18x_K_F7 138.23 129.87 29157 22395 31279 32327 33905 35672 37951 34314 40074 34088 39173 34968 37297 32715 38867 32861 34793 41766 26966 20587 31646 31866 35092 35781 38088 35155 40644 34504 40133 35394 38198 33841 39239 33539 33377 39550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60743000 15373 4137 14565 29261 23460 23460 1 9606 Homo sapiens 0.03125488952082378 LCNDHEVLTFIK Unmodified 1487.7442 0.74424959 1144 C9IYN3;A8K894;V9GYK2;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9-4;Q8WVV9;B7WPG3;Q8WVV9-5;H7C464 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 0 0 0 6.5 0.5 1 1 55.339 55.408 3 5.6854E-07 15910 20230619_1887_Aki_TMTPro18x_K_F7 148.89 96.335 151500 111500 140630 160970 154740 174410 173050 167630 188940 187280 178320 169640 201650 171190 174490 223320 195500 218920 139920 102510 144110 158600 160150 175130 173890 172250 191230 187710 184420 173190 203790 179320 179350 223170 187010 207890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 920430000 15374 1144 14566 29262;29263 23461 23461 1 9606 Homo sapiens 0.019887236087924975 LCNIFSTK Unmodified 981.49535 0.49535211 3433;1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 0 0 3.5 0.5 2 2 57.274 57.294 2;3 0.00012615 17168 20230619_1883_Aki_TMTPro18x_K_F4 176.75 122.2 203010 163110 190270 180660 155760 204600 176940 161950 192210 178570 170430 126500 173060 130010 160750 177660 157120 130370 187600 149510 193780 181380 165390 204070 177720 168890 194080 178090 175710 131090 175840 136570 163570 175090 150180 124420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 364170000 15375 1843;3433 14567 29264;29265;29266;29267 23462;23463 23463 2 9606 Homo sapiens 0.0038642516278741823 LCNLEEGSPGSGTYTR Unmodified 1739.7785 0.77846285 2196 R4GMQ7;B1AMU7;B1AMU4;Q9Y3B2;R4GNH9;B1AMU3 EXOSC1 Exosome complex component CSL4 yes no 0 0 0 4 0 1 46.941 46.983 2 3.6820000000000004E-29 12600 20230619_1883_Aki_TMTPro18x_K_F4 228.62 166.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15376 2196 14568 29268 23464 23464 1 9606 Homo sapiens -0.061835247608996724 LCPNSTGAEIR Unmodified 1216.587 0.58702067 1235 C9JX88;A0A140VK70;P35998;Q75L23;P35998-2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 5.5 0.5 1 1 40.66 40.75 2 5.5599E-06 9826 20230619_1885_Aki_TMTPro18x_K_F5 188.49 146.38 259750 232970 236820 261040 313490 304650 284120 288770 329460 302570 306790 261380 331300 247150 273820 364940 363380 284200 240160 213480 243720 261940 318540 304570 289560 296400 332240 303870 316550 267100 334500 261720 284870 360050 346270 271080 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 401460000 15377 1235 14569 29269;29270 23465;23466;23467 23465 3 9606 Homo sapiens -0.012609362107014022 LCPSLIQESAAK Unmodified 1315.6806 0.6805867 2324 B2RDV7;Q96G46;Q96G46-2 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)];tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes no 0 0 0 7.5 0.5 1 1 53.732 53.801 3 0.002431 15199 20230619_1888_Aki_TMTPro18x_K_F8 72.846 53.771 105110 89277 102170 111290 112820 147690 118700 125900 165040 132800 139010 127980 147090 123440 129400 162960 146090 154290 97196 81907 104280 111030 116780 146010 120770 130250 164390 133800 144100 130100 149040 129580 133000 162530 139680 146610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160460000 15378 2324 14570 29271;29272 23468 23468 1 9606 Homo sapiens 0.035373631717448006 LCPTHADSLNNLANIK Unmodified 1779.8938 0.89376737 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 0 1 0 1 51.902 51.902 3 0.00010556 15160 20230619_1880_Aki_TMTPro18x_K_F1 93.494 74.661 29984 22024 31174 38949 24697 32883 30310 31415 37028 30048 27044 34528 36913 28413 36530 38150 34497 45919 27716 20303 31522 37826 26366 33639 30453 32182 36939 30589 28712 34630 37326 30051 37053 38604 33105 43490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109570000 15379 1842 14571 29273 23469 23469 1 9606 Homo sapiens 0.035016241607991105 LCPVASCPDAR Unmodified 1244.5642 0.56417674 1167 A0A140VJD0;Q9UFC0;H7C5N7 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 0 0 0 5 0 1 40.985 41.073 2 5.8276E-17 9969 20230619_1885_Aki_TMTPro18x_K_F5 188.66 101.34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15380 1167 14572 29274 23470 23470 1 9606 Homo sapiens -0.048322785998379914 LCQDLPCFSR Unmodified 1294.5798 0.5798268 3226 O14929;O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit yes no 0 0 0 7.5 0.5 1 1 53.528 53.599 2 7.9138E-10 15060 20230619_1888_Aki_TMTPro18x_K_F8 212.03 171 175950 139940 160800 159680 154750 202640 191210 182320 208390 203210 160980 149060 210590 164160 145770 232030 183920 186200 162550 128310 164570 160240 162490 201120 191170 188170 209580 202680 169440 154420 210230 172490 151950 229240 175620 177330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 229450000 15381 3226 14573 29275;29276 23471;23472 23472 2 9606 Homo sapiens -0.055679920827742535 LCQIFSDLNATYR Unmodified 1599.7715 0.77152697 3231 O15042-2;O15042;E7ET15;O15042-3 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 0 0 0 3 0 1 63.424 63.455 3 0.02218 19910 20230619_1882_Aki_TMTPro18x_K_F3 45.864 34.424 13467 12057 15317 13707 13411 15489 18087 19735 17242 15867 17589 15366 17603 16029 17222 19156 19686 15219 12474 11050 15371 13745 14199 15623 17947 19753 17618 16224 18020 15666 17957 16667 17664 18977 18781 14513 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141500000 15382 3231 14574 29277 23473 23473 1 9606 Homo sapiens -0.004367928507917895 LCQLCAGK Unmodified 948.45211 0.45210709 2791 CON__Q0IIK2;CON__Q29443;CON__Q2HJF0 yes no 0 0 0 2 0 1 46.918 46.994 2 0.0061706 13050 20230619_1881_Aki_TMTPro18x_K_F2 101.64 62.852 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15383 2791 14575 29278 23474 23474 1 -0.02418087886144349 LCQPYGK Unmodified 864.41637 0.41637351 2651 B4E2S3 no no 0 0 0 1 0 1 43.667 43.667 2 0.0069829 11734 20230619_1880_Aki_TMTPro18x_K_F1 128.75 70.094 40604 22991 41230 43214 46153 55137 45637 50056 60789 46431 61883 64352 60328 53418 47095 40798 81698 75064 37478 21240 41922 42099 47593 54682 46529 51381 61046 47692 63364 64109 61041 54832 49987 43140 77787 70957 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46842000 15384 2651 14576 29279 23475 23475 1 9606 Homo sapiens -0.021258020714981285 LCSQMEQLEQENQQLK Unmodified 2004.9245 0.92447516 835 Q4V328-4;A0A994J436;A0A994J4V9;A0A994J6P1;A0A087WXA6;A0A994J489;A0A994J4J8;A0A994J472;A0A994J4U4;A0A994J4F7;A0A994J6V9;A8K7Z3;A0A994J7B3;A0A994J484;A0A994J6U6;A0A994J720;A0A994J4V2;A0A994J488;A0A994J783;Q4V328;A0A087WW92;A0A994J745;A0A994J4N3;A0A994J4H0;A0A994J4B5;A0A087WT45;A0A994J7A3;A0A994J463;A0A994J724;A0A994J4H5;A0A994J4M4;A0A994J4A2;A0A994J446;A0A994J3Y7;A0A994J799 GRIPAP1 GRIP1-associated protein 1 yes no 0 0 0 4 0.816 1 1 1 57.83 57.861 3 0.022203 17496 20230619_1882_Aki_TMTPro18x_K_F3 51.888 35.489 24231 23218 23990 22968 22835 30400 26927 23557 34140 28550 25424 26363 30348 24208 25939 29013 29194 36490 22428 21248 24375 23325 23972 30020 27123 24677 34020 28543 26715 26782 30603 25323 26653 29483 27951 34553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137330000 15385 835 14577 29280;29281;29282 23476 23476 1 9606 Homo sapiens -0.03779010307130193 LCTFILK Unmodified 893.50446 0.50446024 406 A0A024R6Q1;P55010;Q6IBU0;H0YLZ1;Q32Q19;Q05DF3;H0YN40 EIF5 Eukaryotic translation initiation factor 5 yes no 0 0 0 4.5 0.5 1 1 61.288 61.315 2 0.0090158 18458 20230619_1885_Aki_TMTPro18x_K_F5 119.89 43.737 218250 185840 212760 202310 179540 236530 241690 228400 247010 178060 167050 153020 160460 147520 214380 197120 187650 175980 201820 170270 216100 203530 191050 236340 240220 232570 247920 182010 174940 156450 166640 154920 215470 196170 179720 167420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 353310000 15386 406 14578 29283;29284 23477 23477 1 9606 Homo sapiens 0.05344818519108685 LCTSATESEVAR Unmodified 1322.6136 0.61362935 3533 P31930;B4DUL5 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 2.5 0.5 1 1 39.835 39.898 2 1.4536E-31 9743 20230619_1881_Aki_TMTPro18x_K_F2 285.27 210.67 302050 263670 297650 334530 427350 444870 422840 413430 523040 332770 385750 394620 426120 354680 340380 419480 426290 385480 279380 241920 304940 333390 433410 440760 429420 422340 521110 342930 403980 396670 429640 370520 352790 418400 406760 366650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 586320000 15387 3533 14579 29285;29286 23478;23479 23478 2 9606 Homo sapiens -0.03477292110028429 LCTSVTESEVAR Unmodified 1350.6449 0.64492948 2339 Q96CP5;B3KM34;O75439;G3V0E4;Q9UG64;B3KQ85;B4DM90 PMPCB;DKFZp586I1223 Mitochondrial-processing peptidase subunit beta yes no 0 0 0 3.5 0.5 1 1 43.819 43.876 2 3.4558E-31 11210 20230619_1883_Aki_TMTPro18x_K_F4 276.57 228.15 75171 62531 63164 67473 75826 72366 86014 77985 84045 96585 95912 94536 106720 86658 84953 114300 108000 109720 69424 57295 65376 67837 77945 72994 86053 79787 86284 96524 98300 95831 107530 91131 88204 114070 103120 104260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274250000 15388 2339 14580 29287;29288 23480 23480 1 9606 Homo sapiens -0.016367190759410732 LCVIAECGELK Unmodified 1290.6312 0.63119367 2866 Q6FGM6;E5KN59;E5KN55;Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes no 0 0 0 6 0 1 56.991 57.063 3 2.7646E-07 16890 20230619_1886_Aki_TMTPro18x_K_F6 141.1 107.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15389 2866 14581 29289 23481 23481 1 9606 Homo sapiens -0.002496681087222896 LCVLHEK Unmodified 897.47422 0.47422274 2776 CON__P02769 yes yes 0 0 0 7.5 0.5 1 1 42.735 42.774 3 0.0036238 10593 20230619_1888_Aki_TMTPro18x_K_F8 114.78 39.403 + 269610 827630 948980 289380 3207300 3356000 1525500 1445700 2723900 752240 788550 1201900 442890 649130 721320 702090 1231300 1701700 258780 751780 937410 377320 3106900 3118200 1669500 1587400 2625600 816910 887780 1179500 479990 690740 756770 760180 1176500 1604000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1664399999.9999998 15390 2776 14582 29290;29291 23482;23483 23483 2 9606 Homo sapiens 0.021384598539270883 LCVQNSHQEAR Unmodified 1340.6255 0.62553144 4494 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant yes yes 0 0 0 4.5 0.5 1 1 30.013 30.084 3 7.1656E-13 5571 20230619_1883_Aki_TMTPro18x_K_F4 208.03 175.08 21392 16390 21726 22303 26012 27962 21730 24108 25452 26465 31517 29623 28335 26865 28336 18258 37939 28968 19775 15057 22106 22105 26564 27755 22292 24950 25964 26717 31900 29815 29044 27353 29281 19124 36145 27434 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51219000 15391 4494 14583 29292;29293 23484;23485 23484 2 9606 Homo sapiens -0.0311563057616695 LCVQNSPQEAR Unmodified 1300.6194 0.61938343 2592 B4DUD5;P33240-2;P33240;E9PID8;E7EWR4;B3V096;A0A0A0MT56 CSTF2 Cleavage stimulation factor subunit 2 yes no 0 0 0 4.33 0.471 2 1 37.823 37.891 2 4.0717E-12 8625 20230619_1885_Aki_TMTPro18x_K_F5 208.63 191.12 59884 44094 56687 58653 67895 65054 68554 63886 80600 56358 62542 59423 55037 50774 51976 61465 77680 60703 55314 40504 58021 58119 69594 65287 69429 65163 80626 57500 64666 59922 56334 53204 54370 61528 73957 57727 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107540000 15392 2592 14584 29294;29295;29296 23486;23487 23487 2 9606 Homo sapiens -0.018901488077062822 LCWFLDEAAAR Unmodified 1350.6391 0.63905624 1052 A0A0K0K1K7;O95336;M0R1L2 PGLS 6-phosphogluconolactonase yes no 0 0 0 8 0 1 63.592 63.614 2 2.9462E-11 19359 20230619_1888_Aki_TMTPro18x_K_F8 205.12 156.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15393 1052 14585 29297 23488 23488 1 9606 Homo sapiens -0.022237727969468324 LCYDAFTENMAGENQLLER Oxidation (M) 2289.0042 0.0041820395 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 4 0.816 1 1 1 59.959 59.987 3 5.3185E-15 18319 20230619_1883_Aki_TMTPro18x_K_F4 161.91 153.72 50558 39141 43887 55905 47017 52126 54360 54503 61628 56004 58205 58059 63946 53564 60469 66396 58374 72325 46683 35976 45260 55003 48808 53036 54605 55571 62227 56591 60137 58719 64906 56096 61473 66827 55969 68581 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 124580000 15394 3758 14586 29298;29299;29300 23489;23490 23490 2439 2 9606 Homo sapiens -0.08875988423778836 LCYDAFTENMAGENQLLER Unmodified 2273.0093 0.0092674174 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4 0 1 62.264 62.268 3 2.0500000000000003E-31 19307 20230619_1883_Aki_TMTPro18x_K_F4 233.49 219.24 31927 27777 34548 37813 32912 33660 33449 31437 38314 37078 34614 40290 45445 30883 36778 52036 36356 49941 29554 25505 34865 37298 34306 34308 33854 32446 38635 37267 36198 40447 45572 33317 37618 51778 34883 47406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114240000 15395 3758 14586 29301 23491 23491 1 9606 Homo sapiens -0.07631684561192742 LCYDPDFEK Unmodified 1185.5012 0.50122535 1487 P28161;A0A384P5E9;P28161-2;F6XZQ7;Q0D2I8;E9PHN6;A8HT81;E9PHN7;E9PGV1;P46439;Q5T8R2;A0A3B3IRM5;A0A3B3IU61 GSTM2;GSTM5 Glutathione S-transferase Mu 2;Glutathione S-transferase Mu 5 yes no 0 0 0 3 0 1 54.718 54.764 2 2.4506E-10 16251 20230619_1882_Aki_TMTPro18x_K_F3 157.91 128.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15396 1487 14587 29302 23492 23492 1 9606 Homo sapiens -0.08410521116229575 LCYSSDHEK Unmodified 1137.4761 0.47607323 3483 Q6FGJ9;P21266;Q59EJ5;A4UJ43;B4E2J2 GSTM3 Glutathione S-transferase Mu 3 yes no 0 0 0 7 0 1 37.194 37.259 3 0.028245 8171 20230619_1887_Aki_TMTPro18x_K_F7 59.013 44.322 24545 19286 27434 33420 30229 31465 32220 35396 32984 33224 49535 51480 44032 39741 41005 32841 55371 47513 22713 17769 27706 32539 31201 32038 32419 35839 34189 34230 49814 51016 44989 41013 42491 33968 52786 45002 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8957600 15397 3483 14588 29303 23493 23493 1 9606 Homo sapiens -0.08716575918811031 LCYVALDFEQEMATAASSSSLEK Unmodified 2549.1666 0.16655592 3112;3679;4827;4132 P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;Q96FU6;A5GZ75;A4UCT3;A0A2R8YEA7;G8FSY7;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;Q6S8J3;V9HVZ7 ACTG1;ACTB;PS1TP5BP1;POTEE;HEL-176 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E no no 0 0 0 6.04 1.37 1 1 1 4 8 10 2 68.425 68.457 3;4;5 4.3737E-26 20420 20230619_1888_Aki_TMTPro18x_K_F8 178.32 163.4 215540 165170 172720 220270 190090 217840 229810 210240 214850 227090 247250 229040 281120 215600 220310 243400 230780 253450 198870 151640 178960 217660 197000 219970 228510 215700 220660 228460 253130 231750 282690 224170 225680 244470 220810 240520 22 19 19 23 21 23 21 23 21 22 22 21 25 21 22 22 21 23 17127000000 15398 3112;3679;4132;4827 14589 29304;29305;29306;29307;29308;29309;29310;29311;29312;29313;29314;29315;29316;29317;29318;29319;29320;29321;29322;29323;29324;29325;29326;29327;29328;29329;29330 23494;23495;23496;23497;23498;23499;23500;23501;23502;23503;23504;23505;23506;23507;23508;23509;23510;23511;23512;23513;23514;23515;23516;23517;23518;23519 23518 26 9606 Homo sapiens -0.046060695322921674 LCYVALDFEQEMATAASSSSLEK Oxidation (M) 2565.1615 0.16147054 3112;3679;4827;4132 P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;Q96FU6;A5GZ75;A4UCT3;A0A2R8YEA7;G8FSY7;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;Q6S8J3;V9HVZ7 ACTG1;ACTB;PS1TP5BP1;POTEE;HEL-176 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E no no 0 1 0 5.55 1.23 1 1 3 3 3 63.856 63.893 3;4 3.4229E-26 19449 20230619_1885_Aki_TMTPro18x_K_F5 178.03 92.106 581180 421980 429890 722430 657660 575850 722290 635010 611380 586290 707560 594710 714840 588580 549340 599230 549580 680070 535860 388850 454420 702100 665550 594780 720660 643980 632810 595360 720890 603660 721130 608180 561860 606430 526730 644600 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 8105499999.999999 15399 3112;3679;4132;4827 14589 29331;29332;29333;29334;29335;29336;29337;29338;29339;29340;29341 23520;23521;23522;23523;23524 23520 1808 5 9606 Homo sapiens -0.05850373394923736 LCYYIGATDDAATK Unmodified 1560.713 0.71300904 2116 A8K878;P55145 MANF Mesencephalic astrocyte-derived neurotrophic factor yes no 0 0 0 6.33 0.471 2 1 57.382 57.446 2;3 2.2238E-07 16781 20230619_1887_Aki_TMTPro18x_K_F7 141.37 121.26 126840 131930 124970 125940 114480 126720 145230 129510 145710 170290 183880 168160 182720 142360 166880 227070 166900 164060 117470 120670 126960 127810 120530 128250 144680 133250 150000 169790 186710 170110 185650 152130 170320 223120 159670 156510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 424720000 15400 2116 14590 29342;29343;29344 23525;23526 23526 2 9606 Homo sapiens -0.04491894215948378 LDAAGFWQVWQR Unmodified 1475.731 0.73098279 3326 O76038;A0A994J4C2;Q96P10 SCGN Secretagogin yes no 0 0 0 3.5 0.5 1 1 64.02 64.04 3 9.8494E-10 20035 20230619_1883_Aki_TMTPro18x_K_F4 145.91 123.86 5243.5 4522 5206.3 4441.5 2918.5 4249 5328.7 4888.1 6413 10213 8632.8 10462 11132 11436 9970 11225 11150 15006 4849.9 4139.5 5254.5 4495.8 3286.3 4327.5 5269.2 5091.7 6578.6 10040 8875.5 10632 11240 11752 10232 11491 10683 14198 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46805000 15401 3326 14591 29345;29346 23527 23527 1 9606 Homo sapiens 0.012146536117143114 LDAAMAGHIYVSGSAPSFPR Oxidation (M) 2061.9942 0.9942097 2802 CON__Q3ZBS7 yes yes 0 1 0 2.5 0.5 1 1 51.842 51.894 3 2.0181E-22 15266 20230619_1881_Aki_TMTPro18x_K_F2 173.49 162.99 + 16268 11486 19950 24453 33959 33378 25430 24215 31966 50292 107200 175580 51567 72149 112950 54937 82608 162500 15058 10621 20192 23705 33904 32858 26385 26143 35108 53113 104560 168690 57431 76844 111810 61667 79885 152910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163030000 15402 2802 14592 29347;29348 23528 23528 1672 1 9606 Homo sapiens 0.005692364237802394 LDADKYENDPELEK Unmodified 1677.7734 0.77336069 4448 Q9BV57 ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase yes yes 0 0 1 2.75 1.48 1 1 1 1 49.779 49.832 3 6.8484E-05 14271 20230619_1880_Aki_TMTPro18x_K_F1 99.566 72.597 502630 406080 517640 521470 386490 505340 529540 506550 537990 843550 880030 871330 909490 780190 770280 1030400 934150 1021300 464850 372740 522750 517000 416130 512130 526340 526510 562290 834740 887930 880400 920700 821000 796250 1030100 892810 969770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 695490000 15403 4448 14593 29349;29350;29351;29352 23529;23530;23531 23529 3 9606 Homo sapiens -0.038415053518519926 LDAELVK Unmodified 786.44872 0.4487195 4635 Q9NZZ3;Q9NZZ3-2 CHMP5 Charged multivesicular body protein 5 yes no 0 0 0 4.5 0.5 1 1 51.859 51.909 2 0.023748 14822 20230619_1883_Aki_TMTPro18x_K_F4 103.92 10.994 287790 219980 246970 278180 319140 351310 312530 315320 387870 323450 349210 327080 356390 303230 301090 363730 392450 347490 265690 201930 255560 277040 325820 348850 317760 324770 389180 326750 360200 331250 361000 316750 312510 363470 374300 330390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 446030000 15404 4635 14594 29353;29354 23532 23532 1 9606 Homo sapiens 0.04695308603140802 LDAEPRPPPTQEAA Unmodified 1490.7365 0.73652168 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 1 2.5 0.5 1 1 42.559 42.632 2 0.00035212 10729 20230619_1882_Aki_TMTPro18x_K_F3 119.34 92.821 61683 45973 55775 64796 62120 65193 62369 57318 70655 70316 78427 77162 84495 69276 75656 95444 88729 90291 56960 42255 57292 63862 64025 65713 63131 59485 71833 70590 80356 77811 85616 73103 77920 95139 84780 85808 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 218480000 15405 4109 14595 29355;29356 23533;23534 23534 2 9606 Homo sapiens 0.010782876129042052 LDAPVDYFYRPETQHR Unmodified 2005.9646 0.96462413 4749 Q9Y5Q8-2;Q9Y5Q8;Q9Y5Q8-3;Q5T7U1;Q5T7U4;B7Z1V3;Q5T7U0 GTF3C5 General transcription factor 3C polypeptide 5 yes no 0 0 1 6.5 0.5 1 1 50.683 50.762 4 1.9716E-05 13968 20230619_1887_Aki_TMTPro18x_K_F7 87.148 68.417 99938 90460 110130 118470 94699 111230 127350 101730 128500 106680 117060 103790 113220 89705 137180 119920 98278 107900 92549 83016 110870 117230 100450 112790 126500 104840 130280 107510 120460 105110 116720 94612 136840 119420 94475 102570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114430000 15406 4749 14596 29357;29358 23535;23536 23536 2 9606 Homo sapiens 0.0018804046990226198 LDASESLR Unmodified 889.45051 0.45051041 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KS13;A0A8V8TQK7 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 3 0 1 41.51 41.572 2 0.0011869 10282 20230619_1882_Aki_TMTPro18x_K_F3 147.04 95.019 132360 84217 112650 144530 115020 158990 124950 139560 225390 167500 183940 245270 245910 223830 147920 260510 297960 338490 122070 77653 116330 141040 120070 159050 128490 144680 222130 170340 193630 244660 244660 233540 161050 265170 283910 320530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200490000 15407 826 14597 29359 23537 23537 1 9606 Homo sapiens 0.0013631762109298506 LDCFTHCLIVK Unmodified 1404.6894 0.68937725 2891 E7EMW7;O95071-2;O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 0 0 0 2 0 1 57.574 57.589 3 4.1992E-09 17614 20230619_1881_Aki_TMTPro18x_K_F2 156.51 122.62 88792 74437 80797 82067 66775 75443 80193 84137 82965 108260 71547 68984 106790 86720 58894 122950 104220 100180 82055 68215 82533 82218 70854 77022 80208 85969 84129 106890 75422 72459 105630 90816 63583 121490 99252 95406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78642000 15408 2891 14598 29360 23538 23538 1 9606 Homo sapiens 0.0032201353653817932 LDCQVQGRPQPEVTWR Unmodified 1967.9636 0.96357827 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;Q86SE4 L1CAM Neural cell adhesion molecule L1 yes no 0 0 1 8 0 1 45.654 45.692 3 6.3332E-26 11750 20230619_1888_Aki_TMTPro18x_K_F8 234.77 196.74 52190 47612 49795 46509 33822 40370 54245 55524 54751 58937 57633 55291 63952 48492 65554 59785 65926 63139 48275 43574 50531 47046 36957 41659 53549 55759 55879 59237 59279 56074 65102 50883 66617 60104 63055 59944 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68994000 15409 2005 14599 29361 23539 23539 1 9606 Homo sapiens 0.01831502829350029 LDDAIHVLR Unmodified 1050.5822 0.58219329 1275;357;194 P15884-3;A0A1B0GVR6;P15884-13;P15884-4;P15884-11;E9PH57;H3BTP3;P15884-2;A0A1B0GWD5;A0A1B0GVB8;A0A1B0GW91;A0A0D9SG78;H0YNP8;B4DZ50;Q9NQY2;B4DH96;Q59ES0;B4DZH5;A0A024R5T1;A0A024R5Z0;Q99081;Q99081-3;B4DGI9;B4DZP2;F5GY10;Q99081-4;Q99081-2;H3BPJ7;B3KVA4;A0A024R2C0;P15884-15;P15884-7;P15884-5;P15884-10;P15884-14;P15884-12;P15884;P15884-16;P15884-8;P15884-6;P15884-9 TCF4;TCF12 Transcription factor 4;Transcription factor 12 no no 0 0 0 5.5 0.5 1 1 49.14 49.217 3 3.3106E-06 13412 20230619_1885_Aki_TMTPro18x_K_F5 170.05 133.02 328270 236850 329680 353240 255020 285450 275440 334640 322820 398080 406320 399480 455290 374860 358030 485740 461910 411310 303330 217870 333730 346230 271440 294820 278460 340110 329900 398740 414940 404830 458460 393300 372200 481820 440600 391640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 495220000 15410 1275;357;194 14600 29362;29363 23540;23541 23540 2 9606 Homo sapiens 0.05892547708845086 LDDCGLTEAR Unmodified 1148.5132 0.51318702 1206 A0A140VJT8;P13489;A0A024RC87;E9PIM9;E9PMJ3;E9PLZ3;E9PIK5;E9PMA9 RNH1 Ribonuclease inhibitor yes no 0 0 0 1.5 0.5 1 1 43.979 44.02 2 2.9537E-07 11682 20230619_1881_Aki_TMTPro18x_K_F2 190.02 161.8 380070 325980 309830 341100 421800 460050 436730 442420 523790 501590 558120 514310 550780 485480 482030 616390 603660 600100 351010 298570 322500 344930 429900 455910 442070 454580 529980 504240 570310 520970 559320 508570 498840 615990 576380 570160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 467860000 15411 1206 14601 29364;29365 23542;23543 23543 2 9606 Homo sapiens -0.055129043730630656 LDDDDEGVPSSALR Unmodified 1487.674 0.673981 901 Q6IAW3;A0A090N7W4;Q00535;Q00535-2;A0A0S2Z355 CDK5 Cyclin-dependent-like kinase 5 yes no 0 0 0 1 0 2 48.013 48.013 2;3 2.1469E-36 13502 20230619_1880_Aki_TMTPro18x_K_F1 271.21 255.59 41637 30465 38247 39445 44789 50012 42814 45507 58929 49175 55927 54069 52928 52269 43037 55923 54456 57662 38450 27977 39239 39232 45995 49660 43786 46884 58967 49683 57358 54623 53704 54136 44641 56203 52015 54737 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131030000 15412 901 14602 29366;29367 23544;23545 23544 2 9606 Homo sapiens -0.05034903245928035 LDDIFEPVLIPEPK Unmodified 1623.876 0.87597527 3873 Q14008-2;Q14008;Q14008-3;Q8IYN5;H0YCF6;H0YEK7 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 4 1.41 1 1 1 1 1 64.944 64.972 3 9.8129E-07 20152 20230619_1885_Aki_TMTPro18x_K_F5 125.61 102.01 63744 52582 60700 64279 45517 64802 68461 62191 68666 79339 72924 80815 87604 66590 71825 94978 85962 92833 58922 48236 61733 63966 49201 65399 67710 64200 70173 79283 75314 81484 88152 70695 74225 94790 82159 88170 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 182040000 15413 3873 14603 29368;29369;29370;29371;29372 23546;23547;23548 23547 3 9606 Homo sapiens 0.0889923217755495 LDDLALLEDLEK Unmodified 1385.729 0.72897668 72 B4DZQ5;A0A024QZY5;Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 0 0 0 3 0 1 65.04 65.074 3 0.00011941 20557 20230619_1882_Aki_TMTPro18x_K_F3 108.56 68.212 13766 10319 15057 15610 13836 14666 16083 16157 17890 17514 19868 18312 20847 16426 19125 20440 20135 20526 12733 9491.9 15173 15314 14520 14932 16148 16442 18199 17650 20324 18502 21153 17224 19541 20477 19258 19493 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18139000 15414 72 14604 29373 23549 23549 1 9606 Homo sapiens 0.05154135292605133 LDDLFLK Unmodified 862.48002 0.48001963 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HHY9 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 7 0 1 62.615 62.651 2 0.011157 19016 20230619_1887_Aki_TMTPro18x_K_F7 121.52 28.595 1293100 944250 1117300 1228200 932600 1310200 1108200 1209700 1300500 1504400 1598700 1746700 1651200 1488800 1399900 1819100 1734200 2167100 1193500 867190 1147700 1217900 990990 1315600 1114100 1250600 1326700 1511500 1629200 1753200 1672400 1561800 1448900 1840800 1659100 2053100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1216800000 15415 1723 14605 29374 23550 23550 1 9606 Homo sapiens 0.043278816372207984 LDDLFLKR Unmodified 1018.5811 0.58113065 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HHY9 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 1 2 0 1 56.772 56.788 3 0.046584 17305 20230619_1881_Aki_TMTPro18x_K_F2 57.96 26.025 17819 37457 48046 21395 58177 27398 47991 23165 18248 14712 16956 8357.6 12974 9324.9 107150 8028.1 6287.1 7261.9 16869 34102 46242 23120 58894 27319 48037 23801 20239 15136 17445 8833.7 17727 9532.6 101180 8365.5 6997.2 6901.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7995600 15416 1723 14606 29375 23551 23551 1 9606 Homo sapiens 0.07258333339939327 LDDLVRPYVHK Unmodified 1353.7405 0.74048484 3309 O75533;Q7Z497 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 1 2 0 1 52.225 52.264 4 1.5429E-05 15429 20230619_1881_Aki_TMTPro18x_K_F2 144.65 110.12 79661 50518 68780 72039 68900 84381 90730 73816 93858 103780 114430 119390 119970 112600 86155 141470 131020 160440 73474 46473 70821 71119 72219 84111 90278 76992 96283 103760 116670 120300 120770 117880 90998 142570 125130 152070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 398430000 15417 3309 14607 29376 23552 23552 1 9606 Homo sapiens 0.07776421897256114 LDDLVSTGK Unmodified 946.49713 0.49712625 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 4.5 0.5 1 1 53.658 53.702 2 0.00013083 15329 20230619_1885_Aki_TMTPro18x_K_F5 166.16 108.98 183270 136170 166770 181610 211580 225140 203050 211610 264190 231310 265860 268170 285050 240650 224040 303750 302970 289210 169240 125080 171540 180210 216070 224040 207120 217590 265660 233930 273460 269770 287490 252430 233680 303180 289020 274900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164620000 15418 1661 14608 29377;29378 23553 23553 1 9606 Homo sapiens 0.021737574523854164 LDDMINRPR Oxidation (M) 1144.5659 0.56589129 1867 Q93008-3;Q93008;A0A994J4T3;A0A994J4R6;A0A994J6S4;A0A994J583;B4DGX9 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 1 1 5 0 1 35.285 35.374 3 0.0072771 7695 20230619_1885_Aki_TMTPro18x_K_F5 76.064 67.759 33026 26216 29754 32776 35728 34311 37069 40061 38062 34009 43272 42302 44603 40914 40616 42661 51946 50618 30507 24058 30601 32588 36635 34721 37341 40360 38907 34946 44206 42547 45320 42337 42006 43284 49583 47997 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23963000 15419 1867 14609 29379 23554 23554 1200 1 9606 Homo sapiens -0.0006090151955504552 LDDNEALIEK Unmodified 1158.5768 0.57683314 1672 A0A7P0PJI2;A0A7I2V5K0;P61011;G3V4F7;G3V480;B4DDS7;P61011-2;A0A7I2V584 SRP54 Signal recognition particle 54 kDa protein yes no 0 0 0 2 0 1 52.688 52.721 3 0.0010701 15623 20230619_1881_Aki_TMTPro18x_K_F2 93.258 67.821 49038 36205 46505 53966 40899 45224 51089 46637 52417 78069 79304 85163 100880 74714 73169 99525 81513 91868 45297 33300 47414 52902 43196 46420 50986 48420 54515 77382 81060 85778 100870 78761 75501 99107 77982 87300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77930000 15420 1672 14610 29380 23555 23555 1 9606 Homo sapiens 0.0038877933573076007 LDDPSCPRPECYR Unmodified 1663.7083 0.70827479 3571 P41091;H7BZU1 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 yes no 0 0 1 3.5 0.5 1 1 38.797 38.845 3 1.0019E-07 9097 20230619_1882_Aki_TMTPro18x_K_F3 151.55 119.56 235820 184290 191060 225210 208330 218950 220470 229900 246710 304800 291460 288630 351650 269010 279360 372140 312030 307400 217650 169100 198250 223990 215400 222200 222480 236080 252010 303420 299490 293200 353340 283650 287660 368420 298200 292670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1010299999.9999999 15421 3571 14611 29381;29382 23556;23557 23556 2 9606 Homo sapiens -0.09703101630316269 LDDRNPFK Unmodified 1003.5087 0.50869399 893 B7ZKT9;A0A087X256;Q2M389-2;Q2M389 KIAA1033 WASH complex subunit 7 yes no 0 0 1 7 0 1 45.533 45.621 3 0.060024 11630 20230619_1887_Aki_TMTPro18x_K_F7 55.908 33.222 93427 75502 89674 92368 117430 106620 110180 108920 133650 110490 102760 112110 118030 97579 109880 136950 125000 122080 86354 69268 91815 92102 119440 106850 112200 111140 133600 111670 107630 113270 119610 103210 112860 136070 119430 116120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31303000 15422 893 14612 29383 23558 23558 1 9606 Homo sapiens 0.007079992663761914 LDDSFVR Unmodified 850.41848 0.418482 1609 Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2;K7EIH8;K7ER44;K7EK03;K7EPP7;K7ESP1;K7ELJ8;K7EJV7;K7EN19;K7EJL5;K7EJE9 DNAJC7 DnaJ homolog subfamily C member 7 yes no 0 0 0 3.5 0.5 1 1 47.269 47.33 2 0.00066452 12938 20230619_1882_Aki_TMTPro18x_K_F3 181.2 138.13 225790 151120 179590 242370 208110 233690 203200 184580 239990 257410 259320 229780 279900 227350 192640 293610 291910 272400 208190 139180 187060 236880 213980 235750 206290 194050 243350 255480 265730 234590 280880 238160 203460 292480 278200 259020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 539870000 15423 1609 14613 29384;29385 23559 23559 1 9606 Homo sapiens -0.012710500620414678 LDDTVHVVIATPGR Unmodified 1491.8045 0.80454166 2256 P26196;B2R858 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 0 5.67 0.471 1 2 49.978 50.055 2;3 4.6312E-11 13896 20230619_1886_Aki_TMTPro18x_K_F6 210.95 163.25 139690 123460 136620 141210 118540 176590 152110 156060 181080 136100 162140 141980 162660 126490 151370 129020 163710 160410 129210 113160 138860 141640 125860 175300 152340 160290 181870 138900 167130 143410 165390 131240 154670 131450 156500 152040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 998450000 15424 2256 14614 29386;29387;29388 23560;23561;23562 23561 3 9606 Homo sapiens 0.07831157263558453 LDDTYIK Unmodified 866.43855 0.43854874 1609;2515 B4DKK3;Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2 DNAJC7 DnaJ homolog subfamily C member 7 no no 0 0 0 4.5 0.5 1 1 50.138 50.194 2 0.0062045 14064 20230619_1883_Aki_TMTPro18x_K_F4 134.85 25.744 346380 260800 299170 357190 359600 410620 373200 363320 482720 454630 457250 454650 527270 393780 363270 588720 516620 459180 319760 239620 309120 353320 369500 409990 378790 376890 484640 454710 473140 459770 527920 418550 381970 580540 492420 437710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 502830000 15425 2515;1609 14615 29389;29390 23563;23564 23563 2 9606 Homo sapiens -1.2991220955882454E-05 LDDTYSFQVINK Unmodified 1441.7089 0.70890994 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;B4E263;A2VDI1;B3KWS1;Q8N7L7;B7ZAU8 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 7 0 1 59.799 59.845 2 5.1677E-06 17743 20230619_1887_Aki_TMTPro18x_K_F7 144.77 111.93 23933 21620 25007 27322 24052 26542 31239 25126 31551 35719 29114 30630 39449 29779 31058 37502 37437 37284 22153 19833 25319 27111 25238 26871 31075 26069 32070 35376 30448 31287 39517 31180 32116 37529 35757 35416 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10827000 15426 2332 14616 29391 23565 23565 1 9606 Homo sapiens 0.005723843526766359 LDDWDRER Unmodified 1103.4996 0.49958587 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 1 1.5 0.5 1 1 41.55 41.588 3 0.020094 10801 20230619_1880_Aki_TMTPro18x_K_F1 61.679 43.454 15589 13833 16182 14313 20786 20230 18969 21731 21026 19077 22317 20125 22948 17567 19130 20648 24691 20465 14427 12667 16444 14508 21155 20053 19304 22007 21352 19452 22845 20311 23210 18377 19833 20687 23541 19456 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27887000 15427 3610 14617 29392;29393 23566 23566 1 9606 Homo sapiens -0.04802394089961126 LDDYASAFQGHDVGFCCLGTTR Unmodified 2489.074 0.073992939 4444 Q9BUP3;Q9BUP3-3;E9PI87;Q9BUP3-2 HTATIP2 Oxidoreductase HTATIP2 yes no 0 0 0 7 0 2 60.093 60.139 3 1.2975999999999999E-46 17843 20230619_1887_Aki_TMTPro18x_K_F7 204.5 201.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15428 4444 14618 29394;29395 23567;23568 23567 2 9606 Homo sapiens -0.1109810975522123 LDDYQER Unmodified 937.41412 0.4141249 3890 Q14444-2;Q14444;E9PLA9;B4DSF8 CAPRIN1 Caprin-1 yes no 0 0 0 1.5 0.5 1 1 38.34 38.372 2 0.0049884 9345 20230619_1880_Aki_TMTPro18x_K_F1 150.84 55.95 73360 36397 82733 91817 108960 128370 103020 105470 117630 91749 127950 148050 125200 124510 110980 58669 173300 168710 67739 33825 83732 88506 110990 126360 104680 108970 119300 95232 130790 146740 127370 125800 116230 66352 165180 159100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147170000 15429 3890 14619 29396;29397 23569 23569 1 9606 Homo sapiens -0.05708559275615244 LDEGWVPLEIMIK Unmodified 1541.8164 0.8163519 2662 B5BUB5;P05455;E7ERC4;E9PFL9 SSB Lupus La protein yes no 0 0 0 7 0.816 1 1 1 65.855 65.884 3 3.596E-06 20444 20230619_1887_Aki_TMTPro18x_K_F7 131.69 96.731 139580 124680 130740 139930 127210 163090 149220 161560 157570 179300 164960 185570 183460 165560 162770 216120 186520 188590 129080 114260 133580 140410 133200 163090 149500 165560 160510 180390 169860 187410 185760 174020 167490 214670 178240 179410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 266740000 15430 2662 14620 29398;29399;29400 23570 23570 1 9606 Homo sapiens 0.06711637962507666 LDEIYVAGLVAHSDLDER Unmodified 2014.0007 0.0007348666 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;A0A7I2V4Z0;O60506-4;A0A7I2V346;A0A7I2V5Q6;A0A7I2YQV8;F6UXX1;A0A7I2V4J0;B2R8Z8;O60506;O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 3.5 0.5 1 1 62.178 62.195 3 4.9488E-72 19330 20230619_1882_Aki_TMTPro18x_K_F3 278.22 228.29 94097 68956 80346 92344 79915 100450 84841 81335 116100 101590 100000 123080 141510 119150 98760 138390 130710 161150 86847 63347 82834 91398 83367 100480 86217 84998 115880 102320 105290 123810 141110 124090 103170 139900 124970 152710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 304640000 15431 1680;2265 14621 29401;29402 23571;23572 23571 2 9606 Homo sapiens 0.03429452856153148 LDELEELLTNNR Unmodified 1457.7362 0.73618733 1669 O75306;A0A7I2V4X8;B7Z792;O75306-2;A0A7I2YQG7;A0A7I2V596;Q53HG2;A0A7I2V3J6;A0A7I2V2B9;A0A7I2V4W5;A0A7I2V410;A0A7I2V630;A0A7I2V5G4;A0A7I2V5E2;B7Z9L2 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 3.25 0.829 1 1 2 64.585 64.6 2;3 1.5015E-05 20261 20230619_1883_Aki_TMTPro18x_K_F4 129.74 114.71 23928 22082 22142 23354 24744 28226 29022 30206 30265 27954 25760 27902 30428 26284 26221 28396 29273 29497 22129 20222 22693 23559 25617 28222 29050 30650 30589 28370 26863 28266 30714 27280 26916 28560 27980 28003 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117990000 15432 1669 14622 29403;29404;29405;29406 23573;23574 23574 2 9606 Homo sapiens 0.02562867893038856 LDELQASDVSVK Unmodified 1302.6667 0.66671078 3440 P12270;P12270-2;Q58F23;Q504U6;Q9UE33 TPR Nucleoprotein TPR yes no 0 0 0 4 0 1 54.398 54.413 3 0.0001606 15988 20230619_1883_Aki_TMTPro18x_K_F4 103.13 79.892 82057 61612 64241 73403 75761 92351 88652 87869 91539 87618 107770 96949 113150 80543 92211 101920 106220 102420 75700 56527 66991 73407 78229 91821 88722 90057 93701 88842 109950 97518 114200 84822 94958 102080 101470 97283 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309000000 15433 3440 14623 29407 23575 23575 1 9606 Homo sapiens 0.02748408944262337 LDELYGTWR Unmodified 1151.5611 0.56112349 3558 Q59GY2;P36578;B4DMJ6;H3BM89;B4DMJ2;Q53G74 RPL4 60S ribosomal protein L4 yes no 0 0 0 6 0 1 59.648 59.71 2 0.00010826 18010 20230619_1886_Aki_TMTPro18x_K_F6 154.28 116.72 59120 49909 56212 47507 43284 65167 60973 55018 69472 68410 52107 51421 84444 52302 52970 79706 76925 88118 54655 45680 57123 48457 46607 64311 60704 57252 69663 67929 55663 53031 83563 55505 55886 80023 73447 83565 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33892000 15434 3558 14624 29408 23576 23576 1 9606 Homo sapiens -0.008594623906901688 LDEQEPFPHS Unmodified 1197.5302 0.5302173 3049 O43716;H0YIV9 GATC Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial yes no 0 0 0 1 0 1 47.983 47.983 2 0.00045209 13543 20230619_1880_Aki_TMTPro18x_K_F1 124.92 117.9 23062 17697 16114 23857 21539 26080 25033 23469 30315 31106 27229 29141 30410 25244 27181 29309 31607 34201 21263 16255 17082 23597 22079 26135 25183 24364 30481 30971 28234 29521 30784 26400 27952 29654 30216 32423 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47606000 15435 3049 14625 29409 23577 23577 1 9606 Homo sapiens -0.06064660495553653 LDEREAGITEK Unmodified 1259.6357 0.635745 3674 V9HWK1;P60174;P60174-3;B4DUI5;Q53HE2;P60174-4;Q2QD09;U3KPZ0;U3KQF3 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 1 2 0.816 1 1 1 41.98 42.027 3 0.049755 10471 20230619_1882_Aki_TMTPro18x_K_F3 49.269 34.32 660310 572660 623070 612280 762550 544460 681870 690710 536810 783180 801780 782680 844990 700520 728780 949360 933030 888420 610510 524590 637640 614770 776110 560190 688210 697980 566980 785730 811980 792220 855480 738490 755600 945920 890430 844630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 576040000 15436 3674 14626 29410;29411;29412 23578 23578 1 9606 Homo sapiens 0.016312556300363212 LDEYLNSPLPDEIDENSMEDIK Unmodified 2578.1632 0.16324468 2612 B4DWC4;Q6FIC5;Q9Y696;B3KTR3;Q9NVF8 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 0 0 2 0 1 63.725 63.734 3 4.0441E-06 20303 20230619_1881_Aki_TMTPro18x_K_F2 95.622 82.167 14761 12382 13884 12951 9570.3 13431 13587 11343 13832 18081 17064 19619 23443 15235 16114 20307 15247 20211 13645 11341 14109 13047 10412 13498 13479 11922 14231 17951 17646 19687 23336 16149 16492 20307 14631 19179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23075000 15437 2612 14627 29413 23579 23579 1 9606 Homo sapiens -0.0627104110531036 LDFGNSQGK Unmodified 964.46141 0.46140945 899 A0A090N7V5;O75223;B8ZZK2;H7BZK5;O75223-2;O75223-4 C7orf24;GGCT Gamma-glutamylcyclotransferase yes no 0 0 0 7 0 1 47.983 48.071 3 0.02896 12723 20230619_1887_Aki_TMTPro18x_K_F7 51.528 33.619 84494 64975 81696 75908 89421 96552 91718 86031 130400 102580 106650 106860 111960 99165 80665 139030 143290 155290 78078 59595 83302 76058 92391 95845 93507 89056 129630 103010 110710 108100 112730 104670 86360 139780 136570 147280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80393000 15438 899 14628 29414 23580 23580 1 9606 Homo sapiens -0.02224280004600132 LDFLRPYTVPNK Unmodified 1461.798 0.79799972 2906 Q86U62;Q6IBT1;E9KL30;Q99436;B2RAQ9 PSMB7 Proteasome subunit beta type;Proteasome subunit beta type-7 yes no 0 0 1 4.5 0.5 1 1 58.239 58.269 3 0.00027861 17243 20230619_1885_Aki_TMTPro18x_K_F5 97.203 72.35 142000 111410 158570 164900 171930 232090 169670 174410 708690 183720 153000 159500 216220 163450 177780 194830 171840 200360 131400 102440 159990 162900 178960 228080 187210 182350 667550 185860 185650 163150 216980 170280 181220 195540 164670 190140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145060000 15439 2906 14629 29415;29416 23581 23581 1 9606 Homo sapiens 0.08557264102842055 LDFNLIR Unmodified 889.50215 0.50215205 3534;2560 B4DP06;C9JLK0;V9HWH7;P31939;B2R7P8;P31939-2 ATIC;HEL-S-70p Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 0 1.5 0.5 1 1 59.541 59.547 2 0.004634 18288 20230619_1880_Aki_TMTPro18x_K_F1 146.94 43.659 351490 321390 333320 326090 311070 385540 345770 358020 392410 225940 201190 176890 193620 164590 335440 223410 224700 188650 325120 294230 339770 329930 326230 384730 348070 364070 389030 234230 215270 181620 204600 173300 331850 221990 215810 179680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 205920000 15440 2560;3534 14630 29417;29418 23582;23583 23582 2 9606 Homo sapiens 0.05298106105658462 LDFNTDEEK Unmodified 1109.4877 0.48768378 3579 P42285;A8K6I4;B4E3M6 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 0 0 2 0 1 50.633 50.685 3 0.038509 14771 20230619_1881_Aki_TMTPro18x_K_F2 53.028 35.164 82628 68737 64215 75859 78772 98577 81893 74113 104840 80344 79192 78887 89828 78534 77434 94744 95696 89281 76271 62994 67069 76307 80932 97387 83046 77591 104440 80918 82914 80170 90801 81866 80057 94596 91340 84881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39251000 15441 3579 14631 29419 23584 23584 1 9606 Homo sapiens -0.06268055623809232 LDFNTDEEKK Unmodified 1237.5826 0.5826468 3579 P42285;A8K6I4;B4E3M6 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 0 1 4 0.816 1 1 1 47.498 47.564 3 0.024686 12860 20230619_1883_Aki_TMTPro18x_K_F4 61.344 44.994 179270 132320 160490 181990 181780 200700 189160 188900 226450 221540 233120 199940 228840 171820 217250 210400 247640 186020 165520 121590 165040 179890 187420 201220 191460 194650 228870 221510 238450 203080 233000 180300 222730 209500 236220 177170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91731000 15442 3579 14632 29420;29421;29422 23585 23585 1 9606 Homo sapiens -0.026641221526233494 LDFSMAEALNQEFLATR Oxidation (M) 1970.9408 0.94077715 2433 B3KWQ6;P41219;P41219-2 PRPH Peripherin yes no 0 1 0 6 0.816 1 1 1 63.395 63.437 3 7.7327E-24 19659 20230619_1886_Aki_TMTPro18x_K_F6 207.21 190.9 58973 41970 43742 67991 53265 62774 55178 61816 56092 63295 89784 97865 86503 74306 94124 77060 84568 94841 54370 38649 45993 66381 54689 63806 55593 63284 58420 64900 90471 96964 88720 77564 94958 78452 81078 89855 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 976660000 15443 2433 14633 29423;29424;29425 23586 23586 1494 1 9606 Homo sapiens -0.005855610787648402 LDFSMAEALNQEFLATR Unmodified 1954.9459 0.94586252 2433 B3KWQ6;P41219;P41219-2 PRPH Peripherin yes no 0 0 0 7 0.667 2 5 2 67.28 67.306 2;3 5.5205E-59 20267 20230619_1887_Aki_TMTPro18x_K_F7 303.02 250.44 92214 77069 95513 93016 65515 83088 78908 79304 86807 105160 122800 134240 127540 114410 140300 131940 134500 154530 85279 70688 96280 92430 70776 84683 79134 81913 89414 105740 124600 134060 130640 119580 142080 133590 128880 146420 4 6 6 5 5 6 6 5 5 6 5 4 6 6 6 6 6 4 287920000 15444 2433 14633 29426;29427;29428;29429;29430;29431;29432;29433;29434 23587;23588;23589;23590;23591;23592 23588 6 9606 Homo sapiens 0.006587427838667281 LDFVCSFLQK Unmodified 1255.6271 0.62709457 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;Q14980-5;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q86XH4;F5H0Z7;F5H763;F5H3L6;F5H2F3;G1UI36;F5GZW1;F5H1L0;F8W6T3;F5H068;F5H073;F5GWK2;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 4 0 1 64.369 64.377 3 3.4239E-05 20159 20230619_1883_Aki_TMTPro18x_K_F4 120.68 95.297 70509 54531 75116 79034 71694 84995 77577 87305 80524 64194 59390 61408 72650 58704 70926 74355 64943 62880 65211 50129 75899 77863 74921 85497 78010 88390 81012 66044 62549 62414 73625 61472 71840 73824 62181 59853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73895000 15445 349;3906 14634 29435 23593 23593 1 9606 Homo sapiens 0.009506104598585807 LDFYQHSWLPAR Unmodified 1531.7572 0.75719754 4544 Q9HB07;F8VR84;Q8WYI2;F8VQQ3;Q96CT6 C12orf10;MST024 UPF0160 protein MYG1, mitochondrial yes no 0 0 0 2.5 0.5 1 1 57.183 57.208 3 2.5224E-08 17283 20230619_1882_Aki_TMTPro18x_K_F3 169.09 109.84 115300 92276 99551 101980 96925 131790 126980 117880 133250 105990 96653 89246 111860 87562 109090 115640 105340 94667 106480 84579 102460 102610 101910 130630 126430 121060 133880 107320 101540 91377 113510 91884 110800 114580 100750 90176 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136290000 15446 4544 14635 29436;29437 23594 23594 1 9606 Homo sapiens 0.012589227832222605 LDGCFSTPEER Unmodified 1309.5609 0.5608655 152 A0A024R1Q5;P17050 NAGA Alpha-N-acetylgalactosaminidase yes no 0 0 0 2 0 1 46.458 46.537 2 1.064E-05 12861 20230619_1881_Aki_TMTPro18x_K_F2 145.99 134.14 76405 64226 70602 84521 75892 87452 82694 86989 98523 90497 100740 112710 100090 90522 105350 107370 112350 122020 70618 58960 72372 83704 78655 88179 83490 89005 99533 91947 103330 112640 102470 94980 107430 108440 107490 115710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59527000 15447 152 14636 29438 23595;23596 23596 2 9606 Homo sapiens -0.08153250172836124 LDGEASINNR Unmodified 1087.5258 0.52580062 3356 O95433;O95433-2;H0YJG7;G3V3W9 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 2.67 0.471 1 2 38.818 38.876 2;3 2.1333E-09 9141 20230619_1882_Aki_TMTPro18x_K_F3 200.86 111.72 252080 148680 254960 292810 285200 371470 305190 315570 412560 339000 395760 399540 457910 376680 307410 300380 470790 438480 232710 137430 259530 284540 295000 367950 309860 326840 413310 343450 409350 401880 458250 385550 324160 310890 448640 415130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 451350000 15448 3356 14637 29439;29440;29441 23597;23598;23599 23599 3 9606 Homo sapiens -0.014461249184705594 LDGEASINNRK Unmodified 1215.6208 0.62076364 3356 O95433;O95433-2;H0YJG7;G3V3W9 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 1 5.5 0.5 1 1 38.372 38.46 3 0.00099967 8892 20230619_1886_Aki_TMTPro18x_K_F6 92.19 39.7 90106 51824 87459 99016 121200 100670 99175 116960 126810 104780 124710 141810 142560 118510 98829 118570 201900 163480 83143 47885 89591 96071 122420 102050 102170 118000 127510 107670 128880 141450 142960 123080 107030 121600 191910 154940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134890000 15449 3356 14638 29442;29443 23600 23600 1 9606 Homo sapiens 0.02157808552692586 LDGEIIPHIPANQEVLNK Unmodified 1999.0738 0.07384023 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 0 0 6 0 1 58.476 58.541 3 7.0181E-14 17516 20230619_1886_Aki_TMTPro18x_K_F6 157.74 130.09 122430 99427 107920 132240 98605 139150 128800 132560 152700 179590 156030 190160 199930 175170 157120 224030 196240 223150 113090 91296 110890 130890 104270 139940 128870 137130 154550 179270 162060 191980 200700 183750 163060 224080 187570 211860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 612000000 15450 351 14639 29444 23601;23602;23603 23603 3 9606 Homo sapiens 0.11426626369461701 LDGENIYIR Unmodified 1091.5611 0.56112349 3431 P11171;P11171-2;Q1WWM3;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;A0A994J847;A0A2R8YCW8;P11171-7;A0A2R8Y5Z6;A0A2R8Y5G2;A0A2R8Y420;A0A2R8Y5C8 EPB41 Protein 4.1 yes no 0 0 0 4 0 1 50.15 50.185 2 0.0020758 14089 20230619_1883_Aki_TMTPro18x_K_F4 126.24 98.069 270720 254210 254340 266320 230290 214770 254780 242420 225860 399310 453610 451180 512800 439940 335160 429250 577170 542960 250430 232760 259370 267470 241370 222030 254870 250070 241450 396410 457040 455180 513180 453780 357760 437620 549650 514620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271540000 15451 3431 14640 29445 23604 23604 1 9606 Homo sapiens 0.01900537609321873 LDGFSVLMR Oxidation (M) 1052.5325 0.5324659 4634 Q9NZL4;Q9NZL4-3 HSPBP1 Hsp70-binding protein 1 yes no 0 1 0 1 0 1 57 57 2 0.077223 17266 20230619_1880_Aki_TMTPro18x_K_F1 58.782 40.458 45393 34670 41664 46750 42178 47722 47282 47259 59716 48296 48815 46989 53033 42018 56571 52865 51064 54352 41928 31847 42674 46223 43944 48162 47757 48345 59669 48739 50786 47611 54137 44102 57139 53046 48934 51596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25511000 15452 4634 14641 29446 23605 23605 2836 1 9606 Homo sapiens 0.008300967085460798 LDGLVETPTGYIESLPR Unmodified 1858.9676 0.96764382 661 P55209;F8VY35;H0YIV4;B7Z2V4;F5H4R6;F8W0J6;F8VUX1;A0A024RBB7;P55209-2;F8W020;F8VXI6;F8VV59;B7Z9C2;A0A024RBE6;P55209-3;F8W118;H0YHC3;B7Z5H0;F8VRJ2 NAP1L1 Nucleosome assembly protein 1-like 1 yes no 0 0 0 6.5 0.5 1 1 62.956 62.996 3 1.6985E-18 19449 20230619_1886_Aki_TMTPro18x_K_F6 180.7 162.28 174660 148200 174610 165990 127320 159390 156610 156380 160870 211150 209710 206350 234810 187140 196430 245900 225290 234270 161540 135820 176620 166180 136910 161630 156500 161460 165830 210210 213930 209100 236930 196840 202290 245360 215330 222600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5760900000 15453 661 14642 29447;29448 23606 23606 1 9606 Homo sapiens 0.07251870804111604 LDGNLLTQPGQAR Unmodified 1381.7314 0.73137672 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;A0A804HI02;B4DE53;I6L959;Q9BTW9-5;A0A804HIC0;A0A804HL21;A0A804HKB9 TBCD Tubulin-specific chaperone D yes no 0 0 0 7.33 0.471 2 1 50.142 50.221 2;3 8.6565E-13 13695 20230619_1887_Aki_TMTPro18x_K_F7 177.57 143.82 163050 143660 146850 151700 146990 174650 169170 153010 190170 147910 164310 156430 168890 140470 173330 172060 165910 185030 150710 131580 150580 152900 153410 174400 169900 157740 191360 150120 169990 157970 172420 147130 175770 173120 158950 175530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115880000 15454 1722 14643 29449;29450;29451 23607;23608;23609 23608 3 9606 Homo sapiens 0.0557802854093552 LDGQTPHDER Unmodified 1166.5316 0.53161428 2629 B7ZAX9;B4DZC0;O60264;Q4W5H1 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 1.5 0.5 1 1 29.955 29.99 3 5.246E-14 5991 20230619_1880_Aki_TMTPro18x_K_F1 193.3 171.93 42279 20541 54867 55980 70441 88426 52421 70555 65738 42143 69523 86946 66843 64078 68925 29913 72668 73915 39091 19123 54934 53958 71528 86424 54382 72507 66269 45507 71162 85349 68443 65043 70033 33215 69501 69734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112250000 15455 2629 14644 29452;29453 23610 23610 1 9606 Homo sapiens -0.044990264068019314 LDHALNSPTSPCEEVIK Unmodified 1908.9251 0.92512708 42 A0A024QZK4;Q96FC7;Q96FC7-3 PHYHIPL Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 0 5 0 1 49.58 49.656 3 1.4241E-06 13628 20230619_1885_Aki_TMTPro18x_K_F5 113.29 83.555 93616 38723 97474 87735 50308 59190 85158 78609 75507 105890 95781 112420 104290 86873 85274 126170 104900 121170 86326 35957 97926 84173 56896 62383 83627 79758 78402 105650 97799 112920 105270 92528 88366 125740 100290 115080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77284000 15456 42 14645 29454 23611 23611 1 9606 Homo sapiens 0.007021524042102101 LDHAWAGIAR Unmodified 1108.5778 0.57777661 4508 Q9H3H3-1;Q9H3H3;Q9H3H3-3 C11orf68 UPF0696 protein C11orf68 yes no 0 0 0 1 0 1 46.699 46.699 3 1.2836E-05 12988 20230619_1880_Aki_TMTPro18x_K_F1 122.96 91.888 32410 17592 34106 37293 39446 36332 37127 37187 47417 37945 41644 43087 42048 32223 42284 36717 37652 42010 29919 16287 34594 35996 40442 36817 37888 37962 47470 38475 43030 43126 42882 33856 42708 37142 36100 39830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41851000 15457 4508 14646 29455 23612 23612 1 9606 Homo sapiens 0.02783083285930843 LDHEEEPQLSEPYLSK Unmodified 1912.9054 0.9054375 2673 H0Y6A7;Q5TE61;B7Z1I3;B7Z5P3;Q96MZ0;Q96MZ0-4;H0UIB3;B7Z4H3 GDAP1L1 Ganglioside-induced differentiation-associated protein 1-like 1 yes no 0 0 0 2.5 0.5 1 1 51.488 51.543 3 7.5717E-06 14821 20230619_1882_Aki_TMTPro18x_K_F3 107.5 87.128 56777 18970 44670 48327 26269 28453 37240 40006 46440 74767 74018 86187 85765 77709 46832 93771 58206 106340 52213 17685 46117 46093 29081 30506 37257 41023 48004 73987 75177 86649 85323 81282 49218 94523 55915 100690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141130000 15458 2673 14647 29456;29457 23613 23613 1 9606 Homo sapiens -0.014499003348873885 LDHFNFER Unmodified 1076.5039 0.50394297 4662 Q9UHL4;R4GNE8;Q59EM4;R4GMV4 DPP7 Dipeptidyl peptidase 2 yes no 0 0 0 4.5 0.5 1 1 46.099 46.159 3 0.00082994 12126 20230619_1885_Aki_TMTPro18x_K_F5 120.87 97.44 70868 27104 65420 68972 66433 52647 66636 66776 72319 81250 92181 87163 83372 72767 66865 87269 76578 90911 65270 25239 66911 65942 68778 54785 67394 67655 74171 81476 93196 87748 84586 76297 68941 87608 73275 86257 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70431000 15459 4662 14648 29458;29459 23614 23614 1 9606 Homo sapiens -0.031248848763880233 LDHKFDLMYAK Unmodified 1379.6908 0.69075746 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;B4DN58;Q15670;A6NHL2-2;A6NHL2;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;C9J2C0;Q9NY65-2;Q9NY65;Q7Z3M3;A0A7P0T945;V9GZ17 TUBA1B;TUBAL3;TUBA4A;TUBA1A;TUBA1C;TUBA2;TUBA8;DKFZp686L04275 Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain no no 0 0 1 1.5 0.5 2 2 53.852 53.866 3;4 2.964E-05 16113 20230619_1881_Aki_TMTPro18x_K_F2 139.89 109.9 504800 43766 434510 466250 458650 229620 449990 486240 371960 430240 437410 321820 309600 258050 359290 278200 242190 151960 463630 44506 447380 432430 471960 255880 452180 477580 386230 433930 439470 329630 322110 269260 357560 272590 232240 146000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1995099999.9999998 15460 2408;3747;4144 14649 29460;29461;29462;29463 23615;23616 23616 2 9606 Homo sapiens 0.016099708969477433 LDHVVTIIK Unmodified 1036.6281 0.62808085 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3S6H7G3;A0A3Q8ATF5;Q5U8W9;A0A3Q8APW9;A0A3Q8B022;A0A3Q8APX7;A0A3S6H7Z6;A0A3Q8AIR8;B4DJ87;E9PIX6;A0A3S6H765;A0A3S6H8A6;E9PQ98;Q99873-5;E9PNR9;H0YDE4;A0A3Q8B4N0;A0A3S6H758 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 yes no 0 0 0 1 0 1 52.762 52.762 3 2.4202E-06 15470 20230619_1880_Aki_TMTPro18x_K_F1 156.83 104.9 96490 17004 65909 86526 76306 72604 83532 87661 123730 120230 109610 130170 172210 140910 80101 218680 157400 209280 88550 16304 69760 81327 78695 74708 85022 89392 123300 120110 115870 132200 169450 149130 88129 217510 150210 198690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1028999999.9999999 15461 1536 14650 29464 23617 23617 1 9606 Homo sapiens 0.11123192891091094 LDHYAIIK Unmodified 971.54402 0.54401687 3724 P62750;H7BY10;K7EJV9;K7ERT8;A8MUS3;Q53RC5 RPL23A;DKFZp547I014 60S ribosomal protein L23a yes no 0 0 0 5.33 3.09 1 1 1 48.578 48.629 3 0.00039961 13798 20230619_1880_Aki_TMTPro18x_K_F1 143.01 69.75 563740 131660 444640 518970 517750 507840 579410 585080 743480 506300 477630 461520 628090 506290 423010 799560 640480 701760 518040 124600 463090 491340 533700 515440 585390 590260 737020 515050 508800 473020 626740 536350 447870 792020 611130 667350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1614599999.9999998 15462 3724 14651 29465;29466;29467 23618;23619 23618 2 9606 Homo sapiens 0.0571066179418267 LDIAAVR Unmodified 756.44939 0.4493882 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;B4DN49;V9H023;V9H0D5;B4DL39;V9H0B2;V9H015 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 6 0.816 1 1 1 47.52 47.602 2 0.025746 12460 20230619_1887_Aki_TMTPro18x_K_F7 97.473 29.074 152760 112010 130280 131130 130800 152060 143020 136880 151760 156080 168100 161450 185070 139550 145630 179210 182030 163990 140990 102760 134230 131160 136260 151840 143800 141420 154810 156870 172370 162980 186370 146830 150970 178510 173690 155980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 359530000 15463 3585 14652 29468;29469;29470 23620 23620 1 9606 Homo sapiens 0.061421480428521136 LDIDPETITWQR Unmodified 1485.7464 0.74635808 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 61.62 61.646 2 2.1761E-31 19001 20230619_1883_Aki_TMTPro18x_K_F4 282.13 243.77 504720 416590 460070 460670 364960 480190 427300 435670 437830 589730 585670 613590 621410 542840 635710 657720 607640 676300 466390 381800 469670 462050 388980 483070 427980 452320 452020 588190 595860 619310 633730 568340 644780 660100 582140 641900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 663310000 15464 2973 14653 29471;29472 23621;23622 23621 2 9606 Homo sapiens 0.022914756182672136 LDIDSPPITAR Unmodified 1196.6401 0.6401021 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;A0A024R609;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;H3BQZ3;H3BN34;V9HWB8;P14618;A0A8V8TNX9;B4DNK4 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 5.5 1.71 1 1 1 1 1 1 51.803 51.869 2 1.5212E-16 14474 20230619_1885_Aki_TMTPro18x_K_F5 222.18 185.2 1098000 794360 961560 1052900 945560 1043600 1124000 1097300 1046000 1661400 1688200 1746800 1825300 1526600 1430700 1919800 1905700 1953700 1013500 729710 988490 1041900 988110 1057300 1121200 1132400 1098100 1650100 1707900 1761800 1839800 1603000 1490700 1923300 1819100 1855100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 7983199999.999999 15465 370;3451 14654 29473;29474;29475;29476;29477;29478 23623;23624;23625 23625 3 9606 Homo sapiens 0.04964764843612102 LDIETGFHR Unmodified 1086.5458 0.54580778 2079 A8K5T7;Q9Y2Z0;Q9P1S2 SUGT1 Suppressor of G2 allele of SKP1 homolog yes no 0 0 0 4.5 0.5 1 1 45.915 45.975 3 3.2749E-05 12068 20230619_1885_Aki_TMTPro18x_K_F5 136.57 106.31 57736 44384 58095 64164 62659 75517 58958 66351 73796 73340 70385 67779 76393 73516 62529 82256 78805 78913 53370 40801 59092 63289 64698 75253 60154 68577 74244 73602 72605 69281 77194 76072 64835 82279 75243 74987 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 103210000 15466 2079 14655 29479;29480 23626;23627 23627 2 9606 Homo sapiens 0.005996708121301708 LDIISEDISELQK Unmodified 1501.7876 0.78755419 1804 B4DRV5;A0A8Q3WLP2;Q53FD7;Q53H29;A0A8Q3WKJ4;Q7Z3B4-3;Q7Z3B4;A0A8Z5F6C8;Q9NSY5;A0A8Q3WKK2 NUP54;DKFZp434L1613 Nucleoporin p54 yes no 0 0 0 4 0 1 64.035 64.043 3 0.071173 20048 20230619_1883_Aki_TMTPro18x_K_F4 40.287 35.587 9003.8 10205 11546 5680.1 13242 10636 13199 13474 11226 9743 9258.7 10508 13996 7187.8 11613 13690 10589 11223 8365 9301.7 11504 6206.9 13572 10468 13253 13456 11476 10063 9811.3 10529 13988 7884.8 11806 13506 10146 10683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8023500 15467 1804 14656 29481 23628 23628 1 9606 Homo sapiens 0.056731918670720916 LDILDMFTEIK Unmodified 1336.6948 0.69483978 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 0 0 7.5 0.5 1 1 66.983 67.004 3 6.7921E-05 20737 20230619_1888_Aki_TMTPro18x_K_F8 125.74 93.898 24251 12246 16627 17919 13972 19597 18365 17878 24302 26772 24082 24665 32957 24437 21423 34611 28564 35800 22313 11282 17496 17645 14905 19635 18446 18620 24437 26520 25097 25138 32788 25777 22457 34638 27311 33964 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71858000 15468 351 14657 29482;29483 23629;23630 23630 2 9606 Homo sapiens 0.03996015600023384 LDILELLEK Unmodified 1084.638 0.63797683 2107 Q53TH5;Q96B14;A8K7H4;O43929-2;O43929-3;O43929;B7Z2M4;CON__Q2YDI2 ORC4L;ORC4 Origin recognition complex subunit 4 yes no 0 0 0 6.5 0.5 1 1 65.885 65.919 3 0.00017219 20495 20230619_1887_Aki_TMTPro18x_K_F7 109.88 50.962 + 64905 58939 65370 81020 63218 80877 72846 74192 81185 82313 79306 88765 92808 83278 81201 98778 88812 106060 60061 54117 66444 79960 66182 81598 73165 76496 82200 82957 82115 89624 93776 86896 83299 99367 85021 100600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58833000 15469 2107 14658 29484;29485 23631;23632 23632 2 9606 Homo sapiens 0.09904336105796574 LDINVSK Unmodified 787.44397 0.44396847 1575 B2RBY4;A0A5F9ZHB6;P49642;Q53F98;H0YIP2;A0A3B3ITS8;F8VNY2 PRIM1 DNA primase;DNA primase small subunit yes no 0 0 0 7 0 1 50.744 50.821 2 0.047598 13880 20230619_1887_Aki_TMTPro18x_K_F7 90.657 33.376 231520 183220 207820 229610 231800 266670 244580 231790 309260 286890 285520 260380 328140 228490 244110 323550 324680 279620 213850 168150 213590 228510 239460 266030 247810 240690 310490 286290 295640 264620 329290 241980 254570 320910 309560 266220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308760000 15470 1575 14659 29486 23633 23633 1 9606 Homo sapiens 0.041744244603819425 LDITTLTGVPEEHIK Unmodified 1664.8985 0.89850163 1086 H0Y9M8;A0A0S2Z433;O43181 NDUFS4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial yes no 0 0 0 6 0 1 58.719 58.785 3 1.0274E-15 17613 20230619_1886_Aki_TMTPro18x_K_F6 193.96 155.93 54545 45035 50106 58071 57762 79718 69947 62867 81314 58130 55563 53045 71203 64731 56916 69761 60866 65848 50405 41336 51466 57827 59864 78526 70116 65270 81114 58938 58884 54521 71536 66637 58417 69773 58233 62566 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42865000 15471 1086 14660 29487 23634 23634 1 9606 Homo sapiens 0.09264831575183052 LDLAGTLPGSK Unmodified 1070.5972 0.59717465 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 4.5 3.5 1 1 56.677 56.705 3 0.0011337 17133 20230619_1880_Aki_TMTPro18x_K_F1 89.548 65.697 87102 76400 80688 95886 63888 83179 80235 78991 93317 101950 99925 85473 111250 87051 82691 110760 98486 100260 80528 70090 82347 95048 68260 84960 80393 81636 94642 101310 102570 87639 111770 91039 85617 110260 94091 95328 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 202010000 15472 3588 14661 29488;29489 23635;23636 23635 2 9606 Homo sapiens 0.06469994786198185 LDLDFPNLPYLLDGK Unmodified 1731.9083 0.90833803 3483 Q6FGJ9;P21266;Q59EJ5;A4UJ43 GSTM3 Glutathione S-transferase Mu 3 yes no 0 0 0 8 0 1 66.349 66.368 3 0.00034725 20494 20230619_1888_Aki_TMTPro18x_K_F8 89.466 76.84 11688 9011.1 9027.5 13939 12824 6668.1 9356.3 14082 11032 16086 15105 17573 16980 15568 12303 17699 21437 19415 10783 8290.4 9465.6 13572 12877 7481.2 9703.8 13921 11338 16173 15398 17695 17064 16234 13126 17831 20409 18430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7394000 15473 3483 14662 29490 23637 23637 1 9606 Homo sapiens 0.07166019580563443 LDLDLTADSQPPVFK Unmodified 1657.8563 0.85630246 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 5 0 1 62.851 62.898 3 0.070838 19264 20230619_1885_Aki_TMTPro18x_K_F5 39.629 26.751 78769 53037 69279 79945 58781 81458 73414 77951 84906 79509 88824 109300 100010 100710 100630 104150 111090 139150 72682 48808 71089 78501 62448 82098 73565 79941 85983 81192 91603 109270 101870 104320 102920 106550 106380 131690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313160000 15474 2263 14663 29491 23638 23638 1 9606 Homo sapiens 0.05368856166751357 LDLGEDYPSGK Unmodified 1192.5612 0.56118307 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 3 0.816 1 1 1 53.123 53.16 3 0.00034386 15556 20230619_1882_Aki_TMTPro18x_K_F3 98.898 65.028 346490 283340 341320 365450 305180 406890 336910 363320 404320 485440 502390 496480 545340 429410 427630 605620 638350 550170 320350 260070 346820 362800 321370 407110 340230 377370 412380 484270 512520 501460 549580 454550 449480 602090 608120 523460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 600010000 15475 3246 14664 29492;29493;29494 23639;23640 23639 2 9606 Homo sapiens -0.027395071813316463 LDLIAQQMMPEVR Oxidation (M) 1558.7847 0.7847342 3556 Q53Y06;P36543;P36543-3;P36543-2 ATP6V1E1 V-type proton ATPase subunit E 1 yes no 0 1 0 7 0 1 58.898 58.947 3 0.00012506 17365 20230619_1887_Aki_TMTPro18x_K_F7 96.464 84.299 17609 14498 17109 16877 15924 19726 15811 18765 25798 19234 21866 23483 21961 16968 23544 23562 19797 26221 16279 13294 17402 16891 16671 19706 16267 19242 25536 19553 22636 23427 22471 18076 23710 23718 19022 24853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60834000 15476 3556 14665 29495 23641 23641 2219 1 9606 Homo sapiens 0.0276932193689845 LDLITVEAFKPILSTR Unmodified 1815.0506 0.050585593 2312 B2RD51;O95456;O95456-2 PSMG1 Proteasome assembly chaperone 1 yes no 0 0 1 4 0 1 64.118 64.126 3 3.1106E-11 20067 20230619_1883_Aki_TMTPro18x_K_F4 161.19 143.72 28987 24198 28809 27078 26319 26753 31590 35161 32176 33590 35954 31365 36263 28076 29363 37647 37176 37721 26806 22179 29231 27132 27651 27282 31585 35280 32902 33944 36687 31862 36659 29594 30457 37655 35498 35825 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22534000 15477 2312 14666 29496 23642 23642 1 9606 Homo sapiens 0.17566232322724318 LDLLEDR Unmodified 872.46035 0.46034682 3900;2497 Q14697-2;E9PKU7;B4DZ53;E9PNH1;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 2 0 1 54.387 54.411 2 0.0073979 16301 20230619_1881_Aki_TMTPro18x_K_F2 125.5 45.907 425650 332020 374580 403050 414240 485440 480290 470480 518940 484490 499570 535480 535420 452030 525550 560650 568260 584830 393080 304630 385610 402310 429230 484210 481560 482030 525690 490460 515400 538460 544880 474800 537130 562920 543410 555150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 297610000 15478 3900;2497 14667 29497 23643 23643 1 9606 Homo sapiens 0.019015056264720442 LDLMDAGTDAMDVLMGR Oxidation (M) 1838.8213 0.82125564 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;H0YI79;A0A994J6A0;A0A994J3G1;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402 DNM1L Dynamin-1-like protein no no 0 1 0 5 0 1 65.251 65.295 3 0.00021364 20280 20230619_1885_Aki_TMTPro18x_K_F5 79.92 68.881 7071.3 8902.8 12064 8413.1 7657.8 13658 10529 10180 12061 10007 10625 11577 10443 11574 11047 10469 12415 13676 6598.9 8138.2 11759 8616.3 8408.6 13324 10504 10633 12134 10179 10971 11677 10713 11873 11295 10721 11874 12951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12637000 15479 3212;3213 14668 29498 23644 23644 1893 1 9606 Homo sapiens -0.06460214019352861 LDLMDAGTDAMDVLMGR Unmodified 1822.8263 0.82634102 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;H0YI79;A0A994J6A0;A0A994J3G1;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402 DNM1L Dynamin-1-like protein no no 0 0 0 6 0.816 1 1 1 66.883 66.919 3 1.2866E-13 21125 20230619_1886_Aki_TMTPro18x_K_F6 158.17 140.88 2077.6 1899.8 3855.4 2468.9 2611.3 2428.8 2029.9 2956.6 3288 3628.4 3484.2 3544.1 3210.8 3245.3 4129.5 3599.9 3566.6 3052 1936.1 1743.3 3739.5 2449.8 2789.6 2472.6 2126.5 2998.7 3289.1 3627.2 3555.5 3590.5 3332.1 3373 4148.9 3583.9 3414.4 2906.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29700000 15480 3212;3213 14668 29499;29500;29501 23645 23645 1 9606 Homo sapiens -0.0521591015674403 LDLMDEGTDAR Oxidation (M) 1250.5449 0.54488108 3619;1021;2880 A0A0U1RQP1;A0A0D9SFE4;A0A994J7J4;Q05193-3;Q05193;B4DHH5;A0A0D9SFB1;B7ZAC0;B4DK06;Q05193-5;Q05193-2;Q59GI5;A0A994J5P0;A0A1B0GU67;A0A1B0GUX5;P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96;E5RHK8;H0YBC6;Q9UQ16-2;Q9UQ16-3;Q9UQ16;Q9UQ16-4;A0A8I5KXV5;B3KPF2;Q9UQ16-5;E5RIK2 DNM1;DNM2;DNM3 Dynamin-1;Dynamin-2;Dynamin-3 no no 0 1 0 1 0 1 44.733 44.733 2 0.04833 12153 20230619_1880_Aki_TMTPro18x_K_F1 62.271 43 32236 23850 29331 36054 32066 36055 31622 34322 41948 37941 39898 44080 45684 34808 33029 39047 46765 48587 29768 21940 30117 35383 33110 36405 32238 35284 42068 38342 41295 44134 45825 36467 34598 39685 44624 46040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39855000 15481 1021;3619;2880 14669 29502 23646 23646 581 1 9606 Homo sapiens -0.070369564097291 LDLMDEGTDAR Unmodified 1234.55 0.54996646 3619;1021;2880 A0A0U1RQP1;A0A0D9SFE4;A0A994J7J4;Q05193-3;Q05193;B4DHH5;A0A0D9SFB1;B7ZAC0;B4DK06;Q05193-5;Q05193-2;Q59GI5;A0A994J5P0;A0A1B0GU67;A0A1B0GUX5;P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96;E5RHK8;H0YBC6;Q9UQ16-2;Q9UQ16-3;Q9UQ16;Q9UQ16-4;A0A8I5KXV5;B3KPF2;Q9UQ16-5;E5RIK2 DNM1;DNM2;DNM3 Dynamin-1;Dynamin-2;Dynamin-3 no no 0 0 0 1.5 0.5 1 1 51.873 51.892 2 3.1453E-23 15134 20230619_1880_Aki_TMTPro18x_K_F1 260.04 208.05 66086 43635 59459 63040 43884 66617 71174 58677 75502 85457 84377 105350 97879 89528 88512 99336 96008 116870 60983 40139 60772 62092 47698 66848 70299 61264 77067 85531 86896 105420 99066 93377 90650 100620 91932 110740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203830000 15482 1021;3619;2880 14669 29503;29504 23647 23647 1 9606 Homo sapiens -0.057926525471202694 LDLNDLAR Unmodified 928.49779 0.49779495 3326 O76038;A0A994J4C2 SCGN Secretagogin yes no 0 0 0 4.5 0.5 1 1 53.791 53.834 2 0.0022685 15714 20230619_1883_Aki_TMTPro18x_K_F4 129.42 74.657 300290 265730 286310 219680 198210 424590 322430 315240 555860 617110 530660 567980 669040 479990 617460 736870 539380 679550 277700 242930 290590 228640 218320 410990 325030 337310 552540 606140 551920 575760 675270 512010 625210 732720 517800 645540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1066399999.9999999 15483 3326 14670 29505;29506 23648 23648 1 9606 Homo sapiens 0.03068596892092046 LDLPGNLPGSK Unmodified 1109.6081 0.60807369 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 8 0 1 56.117 56.175 3 0.06223 16225 20230619_1888_Aki_TMTPro18x_K_F8 42.976 22.106 61745 47381 55490 51097 39386 45284 52540 50829 52218 59679 63999 53465 62717 49725 54216 67197 54249 55065 57023 43427 56617 51269 42557 46381 52242 51792 53702 59628 64976 54489 63608 52344 55357 66532 51910 52426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27113000 15484 3588 14671 29507 23649 23649 1 9606 Homo sapiens 0.057653971604850085 LDLQYAK Unmodified 849.45962 0.45961853 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1 PLEC Plectin yes no 0 0 0 8 0 1 51.495 51.572 2 0.08372 14196 20230619_1888_Aki_TMTPro18x_K_F8 72.789 1.9333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15485 3921 14672 29508 23650 23650 1 9606 Homo sapiens 0.02886710977418261 LDLRDDK Unmodified 873.4556 0.45559579 1881;3680 A4D2P1;A4D2P0;A0A994J6T1;P63000;P63000-2;A4D2P2;A0A024R9T5;A0A024R1P2;P15153;B1AH77;B1AH78;B1AH80;P60763;J3KSC4;J3QLK0 RAC1;hCG_20693;RAC2;RAC3 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2;Ras-related C3 botulinum toxin substrate 3 no no 0 0 1 3.5 0.5 1 1 42.609 42.664 3 0.074844 10686 20230619_1883_Aki_TMTPro18x_K_F4 57.859 24.738 258550 128050 242890 249730 307990 346680 260430 330010 467660 222630 255530 434420 434220 421770 192890 510930 717000 833500 238370 118460 249040 243260 314020 342520 271730 335250 455640 237770 280810 430980 427210 440380 231050 528820 681760 787820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170600000 15486 1881;3680 14673 29509;29510 23651 23651 1 9606 Homo sapiens 0.01380621483701816 LDLRDDKDTIEK Unmodified 1459.7518 0.75183739 1881 A4D2P1;A4D2P0;A0A994J6T1;P63000;P63000-2;A4D2P2;A0A024R1P2;P15153;B1AH77;B1AH78;B1AH80 RAC1;RAC2 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2 yes no 0 0 2 4 0.816 1 1 1 47.357 47.423 4 0.0011597 12979 20230619_1882_Aki_TMTPro18x_K_F3 85.837 63.741 633690 578860 609380 566930 660560 615250 682850 658210 661200 785550 857050 733380 773640 612770 773120 783450 739930 593870 586200 529780 621430 574790 681620 620180 686800 672790 683080 785080 865730 743190 791670 645020 784360 774080 707270 566610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3354699999.9999995 15487 1881 14674 29511;29512;29513 23652 23652 1 9606 Homo sapiens 0.0403515441005311 LDLTEAR Unmodified 816.43413 0.43413207 4391 Q96QS3 ARX Homeobox protein ARX yes yes 0 0 0 2.5 0.5 1 1 43.931 44.007 2 0.0069015 11358 20230619_1882_Aki_TMTPro18x_K_F3 129.39 0 271330 203380 205960 255500 337340 336590 284670 285280 372530 290370 376170 410810 317460 347090 384380 345340 441840 426890 250260 186690 216890 254690 338630 333100 292690 295140 374330 297070 383560 409330 329660 359710 392630 351790 422090 404650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 471740000 15488 4391 14675 29514;29515 23653 23653 1 9606 Homo sapiens 0.018572364549982012 LDLTENLTGSK Unmodified 1189.619 0.6190323 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 6 0 2 56.232 56.306 2;3 4.8104E-05 16541 20230619_1886_Aki_TMTPro18x_K_F6 131.83 88.518 798310 775730 787790 841100 687810 783690 821860 775490 964470 749120 664310 635390 800520 661920 739310 708620 643680 663720 738960 710430 799970 843650 726290 796940 825230 792470 962180 755610 701590 651150 809610 684560 747400 709070 616930 630810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 988860000 15489 3588 14676 29516;29517 23654;23655;23656 23654 3 9606 Homo sapiens 0.03180754744062142 LDNIFLTR Unmodified 990.54983 0.54983053 1137 Q9BQ52;Q9BQ52-4;B4DT15;A0A0S2Z5M8;B3KT00;G5E9D5;Q9BQ52-2;V9GYS7;V9GYU5;V9GZ72;J3QLK4;J3QL08;J3QRS2 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes no 0 0 0 1.5 0.5 1 1 59.432 59.438 2 0.031414 18401 20230619_1881_Aki_TMTPro18x_K_F2 78.816 49.654 41711 37153 37533 41745 37264 45994 42788 47236 50828 51738 53447 52111 56923 48406 50370 56971 54651 58679 38558 34046 38503 41848 38935 46212 43088 48273 51441 52055 54853 52773 57673 50513 51609 57191 52276 55700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51072000 15490 1137 14677 29518;29519 23657 23657 1 9606 Homo sapiens 0.05417760305851971 LDNLMLELDGTENK Unmodified 1603.7763 0.77633758 3418 Q6FHV6;P09104;A8K3B0;F5H0C8;F5H1C3 ENO2 Gamma-enolase;Enolase yes no 0 0 0 3.5 0.5 1 1 63.474 63.492 3 0.00035286 19896 20230619_1882_Aki_TMTPro18x_K_F3 91.969 72.894 27484 21024 25291 29977 23715 24793 31173 22490 31302 29622 28026 34080 32687 40039 28236 48269 38281 46778 25387 19324 25880 29455 24943 25413 30981 23372 31755 29715 29158 34611 33102 41479 29461 48228 36588 44414 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162210000 15491 3418 14678 29520;29521 23658 23658 1 9606 Homo sapiens -0.0013995349872857332 LDNVPHTPSSYIETLPK Unmodified 1909.9785 0.97854286 717 Q99733-2;Q99733;B4DS05;B7ZB83;B7ZAK9;A0A024RCC9;A0A2U9QGI0;C9J6D1;A8MXH2;E9PNJ7;E9PS34;E9PJJ2;E9PNW0;E9PP22;E9PKI2 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 0 0 0 7.5 0.5 1 1 54.936 55.001 3 3.6793E-14 15691 20230619_1887_Aki_TMTPro18x_K_F7 166.6 148.69 289470 254670 283390 305090 243220 307490 292680 290090 275600 344580 336930 354740 341020 288520 314430 334470 379180 438190 267740 233530 287950 304020 257360 310310 291890 299080 284500 345440 343140 357250 346670 302440 323900 341080 362580 414880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 319460000 15492 717 14679 29522;29523 23659;23660 23659 2 9606 Homo sapiens 0.059952731783823765 LDNWLNELETYCTR Unmodified 1825.8305 0.83049842 4557 Q9NP72;Q9NP72-2;B7Z5V3;B7Z4P9;Q5W0J0;A0A804HIB9;A0A8C8NLQ3;Q59EW3;H0Y6T8;A0A804HKK5 RAB18 Ras-related protein Rab-18 yes no 0 0 0 6 0 1 64.634 64.678 3 0.0001018 20230 20230619_1886_Aki_TMTPro18x_K_F6 96.247 83.369 20474 18328 22724 22193 18172 21698 20749 22149 24373 27872 21240 27826 29481 24043 28636 29589 28242 29736 18960 16807 22824 22096 19316 21989 20898 22747 24541 27851 22354 28093 29781 25225 29116 29652 27036 28236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67220000 15493 4557 14680 29524 23661 23661 1 9606 Homo sapiens -0.04938361347149112 LDPEEMK Unmodified 860.39497 0.39496937 2995 F8W8Z9;Q8N4H5;Q8N4H5-3;Q8N4H5-2 TOMM5 Mitochondrial import receptor subunit TOM5 homolog yes no 0 0 0 2 0 1 48.722 48.787 2 0.074015 13885 20230619_1881_Aki_TMTPro18x_K_F2 75.38 27.531 95728 73817 88034 99630 98163 117760 104770 111210 152560 120280 134520 152830 158240 128950 106450 151820 166580 158030 88426 67805 90306 98700 101520 117500 106710 114300 151900 122140 139940 152840 158320 135020 112710 152410 158740 150070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48428000 15494 2995 14681 29525 23662 23662 1 9606 Homo sapiens -0.0408123189087064 LDPFADGGK Unmodified 918.4447 0.44469675 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 0 4.5 0.5 1 1 54.374 54.389 2 0.00055895 15950 20230619_1883_Aki_TMTPro18x_K_F4 150.36 89.563 151740 108160 129760 143250 124120 165850 152440 157340 197350 162290 176020 196570 219010 172680 160280 233420 227440 219770 140030 99360 133680 142050 130480 165690 153450 161460 197560 164870 183550 197260 219370 182140 168120 232600 216910 208920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 342930000 15495 3309 14682 29526;29527 23663;23664 23663 2 9606 Homo sapiens -0.01778780890560938 LDPFADGGKTPDPK Unmodified 1456.7198 0.71980898 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 1 6 0 1 51.929 52.006 3 0.0016578 14776 20230619_1886_Aki_TMTPro18x_K_F6 77.146 51.827 74652 93059 109780 90990 115410 85106 124160 102360 60977 84905 97239 41885 48052 32209 154590 30142 28698 26373 69523 85091 108530 92119 119040 87081 122760 102960 67192 85317 95774 44264 55432 33515 147690 30524 28659 25098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29961000 15496 3309 14683 29528 23665 23665 1 9606 Homo sapiens 0.009717867269273484 LDPGLALGPGER Unmodified 1193.6404 0.64043645 732 B4DMA8;B4E063;A0A1U9X7Y0;A0A024RCS7;Q9BW19;A0A1U9X7X5;A0A087X1W5 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 yes no 0 0 0 5 0 1 52.311 52.384 2 0.010696 15046 20230619_1885_Aki_TMTPro18x_K_F5 72.276 18.071 76623 61755 69641 76235 85241 110860 92981 91764 115640 111930 118820 117550 123280 105340 96223 139850 135050 140940 70791 56662 71632 76231 87695 108980 93979 95571 116650 112240 121910 118720 124440 110890 100710 139900 128880 133830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3775399999.9999995 15497 732 14684 29529 23666 23666 1 9606 Homo sapiens 0.05136184563457391 LDPGSEETQTLVR Unmodified 1443.7205 0.72053726 3510 Q53YD7;P26641;P26641-2;B4DUP0 EEF1G Elongation factor 1-gamma yes no 0 0 0 2 0.816 1 1 1 47.672 47.723 2 1.4412E-27 13361 20230619_1881_Aki_TMTPro18x_K_F2 253.1 226.49 337460 234790 276610 325880 242360 369950 276750 302750 491310 422890 399940 540710 538450 465650 312630 715700 631350 706330 311290 215830 285920 322000 256810 368880 283700 317160 484730 424830 421270 541060 534940 495880 341730 713290 601510 670700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1987299999.9999998 15498 3510 14685 29530;29531;29532 23667;23668 23667 2 9606 Homo sapiens 0.01642581375995178 LDPHLVLDQLR Unmodified 1317.7405 0.74048484 148;3549 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 7.5 0.5 1 1 58.73 58.772 3 4.79E-17 17289 20230619_1888_Aki_TMTPro18x_K_F8 186.74 141.88 112250 98368 105680 104270 95276 119760 129160 130320 143340 131020 117690 107190 129430 102960 121320 147780 120890 122900 103790 90100 107770 105100 100820 120160 128690 132380 144200 131660 122420 109850 131300 108740 123630 146320 115680 116990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1116800000 15499 148;3549 14686 29533;29534 23669;23670 23670 2 9606 Homo sapiens 0.09432421897258791 LDPHNHVLYSNR Unmodified 1463.727 0.72696004 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;F5H783;F5GXD8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 7.5 0.5 1 1 35.818 35.848 4 1.3326E-07 7636 20230619_1887_Aki_TMTPro18x_K_F7 166.7 126.11 324400 266040 323610 313820 314470 340420 317190 330170 334650 342880 340220 303920 328600 259930 325270 318660 361370 317150 299960 243970 328550 313460 327370 342050 320400 338290 340310 344590 348110 308890 335470 272830 332750 319240 345100 301410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 895910000 15500 2088 14687 29535;29536 23671;23672 23671 2 9606 Homo sapiens 0.013645641180346502 LDPITGR Unmodified 770.42865 0.42865276 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;D6RAF8;D6RF44;D6RD83;D6RBQ9 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 5.5 1.71 1 1 1 1 1 1 43.523 43.586 2 0.018192 11019 20230619_1886_Aki_TMTPro18x_K_F6 107.59 30.536 1940600 1476400 1612000 1739500 1957300 2030400 1945000 1896400 2349300 2050500 2173500 2192600 2485400 1923600 1693000 2570000 2288200 2334500 1791100 1354300 1670600 1739100 2005800 2028600 1973900 1950800 2363200 2069100 2250900 2211400 2488300 2027700 1773200 2556400 2183900 2219600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5815300000 15501 759 14688 29537;29538;29539;29540;29541;29542 23673;23674;23675 23675 3 9606 Homo sapiens 0.034255576631949225 LDPLEQAK Unmodified 912.49165 0.49164694 2813 D3DRX8;J3KPZ4;Q13901 hCG_2017386;C1D Nuclear nucleic acid-binding protein C1D yes no 0 0 0 4.5 0.5 1 1 50.951 51.004 2 0.00083094 14406 20230619_1883_Aki_TMTPro18x_K_F4 155.1 21.555 104960 85367 89208 102790 103710 122820 110810 110700 139370 135780 150650 148170 170440 135540 134770 168470 161670 161720 96933 78305 92247 102620 106920 122390 112200 114590 140820 136290 154840 149490 171580 141990 139340 168290 154420 153670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139420000 15502 2813 14689 29543;29544 23676 23676 1 9606 Homo sapiens 0.031900786605774556 LDPNKYPVPENWLHK Unmodified 1848.9523 0.95226853 3568 Q6FHX6;P39748;B4DWZ4;P39748-2;I3L3E9 FEN1 Flap endonuclease 1 yes no 0 0 1 2 0 1 56.493 56.511 4 0.014972 17188 20230619_1881_Aki_TMTPro18x_K_F2 68.173 51.095 64813 69019 84776 58743 118330 83810 92304 102780 94632 64788 74737 62890 62708 54926 97255 53916 63801 47859 60197 63071 84745 60651 119110 83453 94684 102590 95417 67463 77092 63713 66004 56851 96194 54017 61257 45579 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34416000 15503 3568 14690 29545 23677 23677 1 9606 Homo sapiens 0.061750487975814394 LDPQGEYEEHLGILGPVIR Unmodified 2134.1059 0.10586864 2794 CON__Q28107 yes yes 0 0 0 5.5 0.5 1 1 60.676 60.731 3 3.8695E-10 18172 20230619_1885_Aki_TMTPro18x_K_F5 107.97 98.05 + 28736 24278 30679 28949 33641 37290 34313 35146 63351 31504 32185 31814 37071 29169 36434 27464 32252 28984 26592 22264 31039 28971 34781 37025 35426 35945 61550 32121 34695 32185 37641 30101 36776 27748 30876 27525 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50455000 15504 2794 14691 29546;29547 23678 23678 1 9606 Homo sapiens 0.08417994052570066 LDPSIFESLQK Unmodified 1275.6711 0.67106787 1442 B5BUB1;A0A384MTR5;Q9Y265;Q9Y265-2;E7ETR0;B3KRS7 RUVBL1 RuvB-like 1 yes no 0 0 0 7.5 0.5 1 1 62.994 63.023 3 1.8128E-06 19089 20230619_1888_Aki_TMTPro18x_K_F8 155.53 104.27 547930 497510 494440 575650 477660 597600 564440 600090 663380 578110 625830 622480 636810 562530 676390 680870 597670 672060 506590 456000 507060 575260 500600 602590 567270 612280 668410 586910 644510 628150 651510 588370 682820 681850 573120 638150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1990199999.9999998 15505 1442 14692 29548;29549 23679;23680 23680 2 9606 Homo sapiens 0.044259181578581774 LDPSPQTIYK Unmodified 1160.6077 0.60773933 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;Q2TU89;Q3LIE0 EIF4G2;AAG1;Nbla00315 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 6.5 0.5 1 1 50.807 50.885 2 1.4391E-05 13962 20230619_1887_Aki_TMTPro18x_K_F7 163.38 106.65 80645 55915 62614 80411 74902 86007 85444 88157 101270 105660 96208 95621 105500 85846 81604 117350 110440 98114 74361 51421 65410 79223 77201 86562 86011 90359 102140 105530 99322 97217 106250 90538 85186 116230 105310 93438 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62863000 15506 3752 14693 29550;29551 23681 23681 1 9606 Homo sapiens 0.03385977440620991 LDPTGTFEK Unmodified 1006.4971 0.49712625 569 A0A024R9D7;Q16698-2;Q16698 DECR1 2,4-dienoyl-CoA reductase, mitochondrial yes no 0 0 0 5 0.816 1 1 1 52.392 52.451 3 0.00013929 14806 20230619_1885_Aki_TMTPro18x_K_F5 118.71 90.94 254750 232790 246840 267710 286140 318580 326990 332000 388600 282600 271580 272990 330000 274180 275020 342370 335400 337780 235670 213350 252180 268230 295290 318600 329090 336840 387500 288180 286700 277810 332420 286440 284330 342490 320340 320860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 249380000 15507 569 14694 29552;29553;29554 23682;23683;23684 23683 3 9606 Homo sapiens -0.005862425476152566 LDPTTTTFLK Unmodified 1135.6125 0.61249036 414 Q9ULP0-6;Q9ULP0-3;H3BQJ4;A0A0S2Z5L7;A0A0S2Z5R7;Q9ULP0-8;A0A024R6V8;Q9ULP0-7;Q9ULP0-4;Q9ULP0;Q9ULP0-2;H3BPQ3;Q9ULP0-5;B3KX54;B7Z9X4 NDRG4 Protein NDRG4 yes no 0 0 0 1 0 1 57.989 57.989 3 0.00031204 17688 20230619_1880_Aki_TMTPro18x_K_F1 112.36 77.825 50989 45647 48885 59977 33647 37997 52545 51153 51791 48126 51087 40832 50127 41706 46757 62706 49833 53915 47160 41893 49675 59102 36657 40391 51877 51308 52747 48571 52343 41900 51028 44103 47867 62130 47679 51287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37210000 15508 414 14695 29555 23685 23685 1 9606 Homo sapiens 0.050108615833551085 LDPYVQR Unmodified 889.46577 0.46576654 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5 0 1 42.813 42.896 2 0.043032 10716 20230619_1885_Aki_TMTPro18x_K_F5 89.369 65.183 96876 73534 86309 101090 127800 124060 131740 122970 145910 124670 138670 155350 144830 135130 134460 154390 168550 196900 89457 67563 89272 100090 129460 123700 132960 125760 147500 126880 143010 155620 147250 141070 138910 157140 161140 186470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90695000 15509 3881 14696 29556 23686 23686 1 9606 Homo sapiens 0.016612292089462244 LDQDLNEVK Unmodified 1072.5401 0.5400537 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 3 0 1 50.6 50.671 3 0.00060826 14423 20230619_1882_Aki_TMTPro18x_K_F3 95.523 56.773 76297 62673 68512 72977 69774 86883 77997 80284 110140 90068 98873 102850 104920 88644 81337 116580 115210 107700 70492 57467 70304 73044 72752 86634 79155 82727 109860 90943 102220 103390 105810 93361 85185 116100 109850 102410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278830000 15510 4191 14697 29557 23687 23687 1 9606 Homo sapiens 0.006685275098107013 LDQEDALLGSYPVDDGCR Unmodified 2021.9 0.90003454 1550 A0A494C0X0;Q99426-2;Q99426;K7EP07;K7EK42;K7EL99;K7EQH0;K7ER04 TBCB Tubulin-folding cofactor B yes no 0 0 0 2 0.816 1 1 1 59.504 59.525 3 1.0646E-13 18395 20230619_1881_Aki_TMTPro18x_K_F2 151.41 142.16 42922 33492 42379 46728 39917 47817 47377 48404 54180 51344 50351 51453 56180 52142 49090 54742 53021 56616 39673 30774 43091 46105 41892 48262 47555 49488 54663 51747 52102 52251 56847 53887 50292 55065 50717 53741 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 125590000 15511 1550 14698 29558;29559;29560 23688;23689;23690 23689 3 9606 Homo sapiens -0.07003947189059545 LDQEVAEVDK Unmodified 1144.5612 0.56118307 4407 Q99816;F5H442;Q99816-2;D3DQY6 TSG101 Tumor susceptibility gene 101 protein yes no 0 0 0 1.5 0.5 1 1 50.215 50.215 3 0.0005686 14456 20230619_1880_Aki_TMTPro18x_K_F1 98.353 70.176 22461 16550 19628 20959 24906 28640 24252 24786 32576 26280 26088 31878 28940 21629 28600 31076 32753 32008 20735 15195 20264 20901 25466 28284 24740 25622 32448 26659 27239 31745 29419 23158 29331 31120 31292 30394 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83560000 15512 4407 14699 29561;29562 23691;23692 23691 2 9606 Homo sapiens -0.005315071813356553 LDQILLNGNNITMLVPGGEGPEV Unmodified 2392.2308 0.23081116 910 A0A090N8Y5;Q9Y4Y9;Q9Y4Y9-2 LSM5 U6 snRNA-associated Sm-like protein LSm5 yes no 0 0 0 6.5 0.5 1 1 67.823 67.855 3 4.3008E-06 21483 20230619_1886_Aki_TMTPro18x_K_F6 95.206 84.351 4844.3 3448.8 4403.3 3561.7 5508.6 6274.6 6042 6103.2 5519.9 6206.4 6511.8 5378.2 6347.6 4825.5 5564.5 5291.7 6707 4938.2 4472.4 3160.8 4366.2 3627.2 5648.5 6135 6045.2 6243.9 5695.8 6239.4 6619.6 5481 6442.6 4986.3 5732.8 5243.9 6393.9 4700.5 3 3 2 3 3 3 3 3 3 3 3 3 3 2 3 2 3 3 23205000 15513 910 14700 29563;29564 23693;23694;23695 23693 3 9606 Homo sapiens 0.09038498406744111 LDQILLNGNNITMLVPGGEGPEV Oxidation (M) 2408.2257 0.22572578 910 A0A090N8Y5;Q9Y4Y9;Q9Y4Y9-2 LSM5 U6 snRNA-associated Sm-like protein LSm5 yes no 0 1 0 7 0 1 66.99 67.013 3 2.81E-06 20919 20230619_1887_Aki_TMTPro18x_K_F7 95.48 86.11 4153.3 3629.1 3176.4 4359.4 7066.8 6445.8 4414.9 4840.1 7080.7 4941.7 5474.5 4790.5 6569.1 4057 5349.8 5976.4 4593.5 4928.7 3834.6 3328 3371.3 4366.6 6959 6326.6 4684.7 5055.6 6996.3 4990.6 5733.6 4850.8 6600.3 4316.2 5423.4 5914.5 4404.6 4691.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8492300 15514 910 14700 29565 23696 23696 521 1 9606 Homo sapiens 0.07794194544158017 LDQLIYIPLPDEK Unmodified 1555.8498 0.84976052 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;Q9NTC4 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 6.8 0.748 2 2 1 64.593 64.626 2;3 5.1205E-06 19934 20230619_1887_Aki_TMTPro18x_K_F7 165.58 128.11 380630 273580 324880 398800 393380 473310 409900 431120 457750 466140 486200 461180 510220 406520 442730 569600 505660 569410 351260 251590 336200 393160 404110 471730 413860 444180 464910 469060 498340 466900 516620 429930 455600 569330 483650 540600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1991999999.9999998 15515 3656 14701 29566;29567;29568;29569;29570 23697;23698;23699;23700 23698 4 9606 Homo sapiens 0.09406963006063052 LDQPFIDCIR Unmodified 1275.6282 0.6281572 3975 Q4J6C6-4;Q4J6C6-2;Q4J6C6-3;Q4J6C6 PREPL Prolyl endopeptidase-like yes no 0 0 0 5.5 0.5 1 1 57.745 57.809 2 0.00024534 17206 20230619_1886_Aki_TMTPro18x_K_F6 135.55 88.482 115200 105670 130980 126800 98234 114370 99658 137760 133610 138760 125790 118450 147410 118750 121590 164060 155560 149900 106720 96884 131200 126220 104740 117130 101650 139030 133990 139520 130300 121290 148530 124920 126210 163210 148470 142550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 131830000 15516 3975 14702 29571;29572 23701;23702 23702 2 9606 Homo sapiens 0.0013682482876902213 LDQPGNLPGSNR Unmodified 1266.6317 0.63166267 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 5.5 0.5 1 1 41.97 42.064 2 0.00012622 10376 20230619_1886_Aki_TMTPro18x_K_F6 137.78 104.84 35470 31682 35402 36868 25132 32741 33742 28290 42859 42205 49716 43653 52048 39397 34390 47294 45447 39772 32817 29042 35827 36759 27202 33322 33812 29615 43403 41968 50715 44129 52174 41206 35960 46946 43338 37876 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46482000 15517 3588 14703 29573;29574 23703;23704 23704 2 9606 Homo sapiens 0.009012109269860957 LDQPGNLPGSNRR Unmodified 1422.7328 0.7327737 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 1 1 0 1 36.757 36.757 3 0.00035624 8680 20230619_1880_Aki_TMTPro18x_K_F1 94.551 73.322 67298 48564 53427 54004 62290 68007 57229 60553 72506 74964 77630 69109 87440 67862 71822 68086 80031 76691 62077 44534 55554 54292 63924 67555 58490 62733 73247 74825 79761 70384 88138 70112 73735 68920 76471 72763 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53396000 15518 3588 14704 29575 23705 23705 1 9606 Homo sapiens 0.03831662629681887 LDQQTLPLGGR Unmodified 1196.6513 0.65133548 1108 A0A0S2Z4W4;Q7Z3D7;P98175-2;P98175;P98175-5;A0A0S2Z4X1;P98175-4;P98175-3;Q6PKH5 DKFZp686E2459;RBM10 RNA-binding protein 10 yes no 0 0 0 7 0 1 49.097 49.181 2 0.0003032 13215 20230619_1887_Aki_TMTPro18x_K_F7 132.88 64.454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15519 1108 14705 29576 23706 23706 1 9606 Homo sapiens 0.06087586937769629 LDRETEELHHDR Unmodified 1548.7281 0.72808225 3287 O60869-2;O60869-3;O60869 EDF1 Endothelial differentiation-related factor 1 yes no 0 0 1 1.5 0.5 1 1 30.98 31.013 4 1.2008E-09 6358 20230619_1880_Aki_TMTPro18x_K_F1 184.32 156.12 48097 31402 35921 40653 35801 45588 38741 38296 51431 49287 62179 58148 57557 54754 40040 59884 67237 60077 44325 28852 37532 40347 37380 45540 39296 39932 52074 49514 63024 58541 58118 56830 42632 60052 64020 57086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308030000 15520 3287 14706 29577;29578 23707 23707 1 9606 Homo sapiens -0.0243326630370575 LDRLDLAR Unmodified 970.55598 0.55597854 3188 Q53HJ6;M0QXB4;O14579;O14579-2;Q7Z4Z1;O14579-3 COPE Coatomer subunit epsilon yes no 0 0 1 7.5 0.5 1 1 44.666 44.719 3 0.00069145 11207 20230619_1887_Aki_TMTPro18x_K_F7 125.82 63.271 241280 207150 208210 223150 249650 248970 260420 249870 274360 248320 243660 224100 255200 210220 239720 325050 278210 243560 222920 189780 214950 224480 256170 249980 262330 255160 277510 250350 251850 228430 259380 223300 246630 319980 265570 232330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 173370000 15521 3188 14707 29579;29580 23708;23709 23708 2 9606 Homo sapiens 0.06952278537380607 LDRPAGGPSAESPR Unmodified 1408.7059 0.70589025 1743 A0A8B0RAT7;Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 yes no 0 0 1 4.5 0.5 1 1 33.137 33.206 3 0.0021572 6852 20230619_1885_Aki_TMTPro18x_K_F5 72.615 57.925 18860 11738 25274 23728 29834 36592 24924 27503 31812 25186 36546 47783 30398 34779 30601 21369 36266 39242 17462 10851 25203 23119 30520 35782 25647 28661 32170 26277 37079 46972 31290 35561 31374 22729 34665 37072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27185000 15522 1743 14708 29581;29582 23710 23710 1 9606 Homo sapiens 0.017885540185034188 LDSIDPALR Unmodified 998.53966 0.53965977 573 A0A024R9G7;Q6PL18;Q9ULI0-2;Q9ULI0 ATAD2;ATAD2B ATPase family AAA domain-containing protein 2;ATPase family AAA domain-containing protein 2B yes no 0 0 0 4 0 1 53.394 53.414 2 0.011491 15569 20230619_1883_Aki_TMTPro18x_K_F4 82.452 52.267 183820 131460 137690 163200 136620 136630 170020 170540 169030 215240 226780 235540 248120 214380 184860 234450 244990 227880 169480 120690 143830 161880 142850 141020 169510 173110 174750 215620 230890 237430 249590 222860 192680 234800 233700 216570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149690000 15523 573 14709 29583 23711 23711 1 9606 Homo sapiens 0.040331525806209356 LDSIVIQQGR Unmodified 1127.6299 0.62987176 2629;940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370;D7EZH4;B7ZAX9;B4DZC0;O60264 SMARCA1;SMARCA5 Probable global transcription activator SNF2L1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 no no 0 0 0 8 0 1 51.221 51.298 2 1.36E-06 14078 20230619_1888_Aki_TMTPro18x_K_F8 198.65 148.93 220030 164440 184210 220090 196680 230320 234040 208700 247360 223420 240880 205740 247070 187710 229100 230790 217600 192570 203070 151050 190540 217740 204480 231570 234150 215200 250900 224540 247500 209210 250920 196560 232640 229120 208130 183400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156140000 15524 940;2629 14710 29584 23712 23712 1 9606 Homo sapiens 0.07116201909047959 LDSLPPVIK Unmodified 980.59063 0.59063271 2519 B4DKV8;Q8NFH4;F8VTY2 NUP37 Nucleoporin Nup37 yes no 0 0 0 1 0 1 59.029 59.029 3 0.0158 18044 20230619_1880_Aki_TMTPro18x_K_F1 66.27 29.079 29333 23562 26541 26852 27137 32910 30174 28700 31026 38615 33967 29635 40761 31302 31827 38453 33826 35736 27099 21602 27209 26933 28248 32722 30279 29869 31729 38217 34975 30561 40934 32635 32668 38356 32359 33964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47881000 15525 2519 14711 29585 23713 23713 1 9606 Homo sapiens 0.09956101625459723 LDSLTYK Unmodified 838.44363 0.44363412 84 Q96S66;A0A6Q8PG75;Q96S66-2;A0A6Q8PEZ7;A0A024R0G0;A0A6Q8PHQ1;A0A6Q8PG30;A0A024R095;A0A6Q8PGA4;Q96S66-4;Q96S66-3;A0A8I5KRC0;A0A6Q8PG68;A0A6Q8PFT6;A0A6Q8PF11;A0A8I5KXB0;A0A6Q8PFH1;A0A6Q8PF97;B3KQX4 CLCC1 Chloride channel CLIC-like protein 1 yes no 0 0 0 8 0 1 52.072 52.149 2 0.014775 14493 20230619_1888_Aki_TMTPro18x_K_F8 112.17 47.395 117680 102100 110400 127380 127890 136700 145670 139580 160190 146150 171840 177680 164680 140680 150560 180730 194010 187980 108800 93668 113130 126680 131910 137600 146270 142600 162750 148310 175480 177740 167680 148430 155910 181280 185170 178490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93530000 15526 84 14712 29586 23714 23714 1 9606 Homo sapiens 0.017950047405292935 LDSSAQFGYYFR Unmodified 1452.6674 0.66737948 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;B4DN49;B4DL39;B4DSB9 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 2 0 1 60.266 60.278 2 1.1836E-12 18721 20230619_1881_Aki_TMTPro18x_K_F2 201.61 56.723 132520 102280 105750 123110 93921 120230 119550 111870 121540 129450 141450 125020 137980 119860 128090 146460 147970 136500 122290 93838 109600 122570 99362 121580 119140 115390 124510 129750 143930 127040 140490 125200 131620 146150 141300 129800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132670000 15527 3585 14713 29587 23715 23715 1 9606 Homo sapiens -0.0408475161602837 LDSSAVLDTGK Unmodified 1104.5663 0.56626845 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 5.5 0.5 1 1 51.561 51.637 3 0.00015612 14426 20230619_1885_Aki_TMTPro18x_K_F5 115 92.087 75629 54269 66466 73972 73652 85342 81490 81471 100060 82463 93719 102380 109340 83443 93323 99262 108060 105880 69808 49869 68444 73213 76224 85317 82274 83532 100580 83923 97188 102380 110280 87573 96020 99852 103240 100500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288050000 15528 1723 14714 29588;29589 23716 23716 1 9606 Homo sapiens 0.018167966812825398 LDSSPSVSSTLAAK Unmodified 1361.7038 0.70382456 1505 Q13428-4;A0A3B3IS06;Q13428-3;Q13428;Q13428-7;Q13428-6;Q13428-8;Q13428-2;E7ETY2;A0A6I8PRA0;B4DRA2 TCOF1 Treacle protein yes no 0 0 0 7 0 1 50.879 50.957 2 0.0109 14018 20230619_1887_Aki_TMTPro18x_K_F7 88.681 65.851 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15529 1505 14715 29590 23717 23717 1 9606 Homo sapiens 0.03744080490059787 LDSVLLLSSMNLPGGELR Unmodified 1913.0292 0.029198224 1922 A3KFL5;Q13868;B4E001;A0A8I5KV47;A0A8I5KVY3;A3KFL2;Q13868-2 EXOSC2 Exosome complex component RRP4 yes no 0 0 0 2 0 1 65.492 65.5 3 0.0092564 21022 20230619_1881_Aki_TMTPro18x_K_F2 61.648 47.49 5202 5666.1 4943.2 4001.2 2897.4 5394.6 4822.2 4309.8 4171 4560.7 5169.2 5964.5 4977.9 4333.8 5659.2 5731.7 6288.6 5022.1 4818.1 5171.3 5009.3 4204.7 3238.7 5325.5 4733.3 4486.1 4324.9 4637.1 5256.5 5934.8 5120.3 4594.8 5777.3 5698.2 6002 4782.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17240000 15530 1922 14716 29591 23718 23718 1 9606 Homo sapiens 0.10920479231731406 LDTAMWLSR Unmodified 1091.5434 0.54336494 595 D6RAA6;A6QKW0;A0A024R9W7;P57088;J3KN43;D6RBY2 TMEM33;SHINC3 Transmembrane protein 33 yes no 0 0 0 2 0 1 59.662 59.675 2 0.0094569 18492 20230619_1881_Aki_TMTPro18x_K_F2 86.136 52.873 71262 60684 74730 79772 69820 88489 88443 85222 93091 90419 75024 73279 87800 72673 83885 100000 85862 92156 65937 55705 75607 79097 73477 88703 88228 87424 93898 90594 78395 75183 89018 76450 85571 99563 82176 87591 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56290000 15531 595 14717 29592 23719 23719 1 9606 Homo sapiens 0.0012549908283290279 LDTDDLDEIEK Unmodified 1304.5984 0.59835644 3102 Q9NUU7;I3L0H8;Q9UMR2;Q9UMR2-4;Q9UMR2-2;A0A0U4B4U6;F6QDS0;H3BQK0;Q53G16;Q7Z4W5;Q9HBZ9;Q2NL95;B4DS24;Q69YM2;I3L352;Q68DY7;B4DL69;A0A024QZ90;Q59FQ9;Q9UMR2-3;Q9NUU7-2 DDX19A;DDX19B;DKFZp762C1313;DKFZp686C21137;hCG_1998531 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B yes no 0 0 0 1.5 0.5 1 1 56.984 56.993 2 4.0817E-12 17230 20230619_1880_Aki_TMTPro18x_K_F1 208.6 143.89 221170 178490 197670 208790 186190 235220 208160 197120 241700 244190 255550 251610 278620 230410 229740 276240 271660 285870 204310 163680 202680 208720 195230 234950 209690 205330 244940 244550 262480 254410 281280 240850 237050 277270 259610 271370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 242580000 15532 3102 14718 29593;29594 23720;23721 23720 2 9606 Homo sapiens -0.041758804262371996 LDTEQLAQR Unmodified 1072.5513 0.55128709 1737 Q86UE8;Q86UE8-2;Q86UE8-3;D3DU05;B4DUC2;A0A804HJZ9;A0A804HKF1;J3KRK0;A0A804HJX3;A0A804HK10;J3QS44;J3QQN4;A0A804HKD4;J3QLK5 TLK2 Serine/threonine-protein kinase tousled-like 2 yes no 0 0 0 3 0 1 42.519 42.585 2 0.0027179 10712 20230619_1882_Aki_TMTPro18x_K_F3 103.82 84.047 148370 115080 132270 146280 149940 167520 160570 145450 202050 144970 164800 164870 165230 128540 161200 177140 185890 173100 137020 105640 136060 145410 154750 167270 162490 150170 201800 147270 170870 165310 168400 136390 165440 176950 177530 164500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47747000 15533 1737 14719 29595 23722;23723 23722 2 9606 Homo sapiens 0.017913496039454913 LDTFCGSPPYAAPELFQGK Unmodified 2096.9877 0.98772734 1646;320;1671 Q7KZI7;Q7KZI7-7;A0A024R555;A0A7I2V3R3;A0A7I2YQR3;A0A140VJP1;A0A0A0MRU9;A8K2S4;E7ETY4;E9PC69;A9CP04;A0A024R5B2;Q7KZI7-8;Q7KZI7-13;Q7KZI7-12;Q7KZI7-2;Q7KZI7-9;Q7KZI7-11;Q7KZI7-6;Q7KZI7-15;Q7KZI7-14;Q7KZI7-10;Q7KZI7-3;Q7KZI7-4;Q7KZI7-16;Q7KZI7-5;Q96L34-2;Q96L34;Q8N2N5;A0A7I2V4L1;Q6IPE9;O75271;K7EN95;P27448-7;P27448;A0A7I2V2N8;A0A7I2V639;A0A7I2V3I9;A0A7I2V5G3;A0A7I2V4K8;A0A7I2V549;A0A7I2V3B9;A0A7I2V4G7;A0A7I2V2I9;H0YJI9;H0YNV4;A0A7I2V3K2;P27448-2;J3KNR0;P27448-4;A0A7I2V2U9;P27448-3;P27448-6;A0A7I2V602;A0A7I2V409;A0A7I2YQF4;H0YKP9;A0A7I2V2E3;A0A7I2V4T2;A0A7I2V3P5;A0A7I2V3C6;A0A7I2YQF7;A0A7I2YQC1;A0A7I2V550;X5DNR8;B4DIB3;Q9P0L2-2;Q9P0L2-3;Q9P0L2;X5D2M4;A0A087X0I6 MARK2;Par1b;MARK4;MARK3;MARK1 Serine/threonine-protein kinase MARK2;MAP/microtubule affinity-regulating kinase 4;MAP/microtubule affinity-regulating kinase 3;Serine/threonine-protein kinase MARK1 no no 0 0 0 1 0 1 62.971 62.971 3 3.6167E-07 19707 20230619_1880_Aki_TMTPro18x_K_F1 102.58 93.786 14547 10515 11290 13000 11514 12420 12840 10898 12293 16494 15377 17958 17526 17385 14109 18227 17777 21448 13417 9651.9 11752 12915 11980 12573 12853 11399 12701 16410 15742 18131 17675 17991 14633 18471 16999 20324 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70817000 15534 320;1646;1671 14720 29596 23724 23724 1 9606 Homo sapiens -0.016887015275642625 LDTGEYSCEAR Unmodified 1299.5401 0.54013005 3044 H0YEX9;P57087-2;P57087;P57087-3 JAM2 Junctional adhesion molecule B yes no 0 0 0 2 0 1 41.092 41.168 2 7.7408E-06 10341 20230619_1881_Aki_TMTPro18x_K_F2 152.54 135.6 40003 30693 38710 37010 58731 65494 40110 32527 40482 54874 58944 58980 63658 47563 41778 62622 66098 61540 36966 28161 39713 37203 58928 63316 41542 36114 42050 54392 59783 59299 63748 50262 44323 62562 62975 58479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33027000 15535 3044 14721 29597 23725 23725 1 9606 Homo sapiens -0.09765840552518057 LDTGPQSLSGK Unmodified 1101.5666 0.5666028 3547 Q6IBK5;P35269;B4DXY2;M0QXD6;B4DDB5 GTF2F1 General transcription factor IIF subunit 1 yes no 0 0 0 6.5 0.5 1 1 47.065 47.149 2 1.0185E-05 12245 20230619_1887_Aki_TMTPro18x_K_F7 176.45 111.8 93788 69817 81649 96128 92061 102690 95874 92884 119560 125000 124590 132510 135750 107900 111350 150300 148930 132610 86581 64154 84196 94958 94978 103110 97175 96446 120720 124830 128100 133350 137030 114360 115940 149250 142010 126200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41649000 15536 3547 14722 29598;29599 23726;23727 23727 2 9606 Homo sapiens 0.019882164011505665 LDTHPAMVTVLEMGAAR Oxidation (M) 1826.9019 0.90188922 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q5CAQ4;I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 1 0 6.5 0.5 1 1 51.883 51.957 3 0.0002048 14386 20230619_1886_Aki_TMTPro18x_K_F6 80.638 65.251 240680 200100 244850 232840 230830 267250 286650 262670 282160 286430 305560 337810 314390 277040 303840 348360 338750 344570 222610 183470 248140 233010 242360 267530 285660 269360 288660 289720 313070 338520 320180 291450 311320 348590 323820 327290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 309900000 15537 1211 14723 29600;29601 23728;23729 23728 748;749 2 9606 Homo sapiens 0.02151435085875164 LDTHPAMVTVLEMGAAR Unmodified 1810.907 0.9069746 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q5CAQ4;I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 7.5 0.5 1 1 57.697 57.749 3 5.1869000000000005E-30 16882 20230619_1888_Aki_TMTPro18x_K_F8 224.86 202.28 161240 142240 163580 167800 129130 150430 168030 149440 178310 203840 177660 202690 195870 168330 204480 199940 221470 215630 149180 130410 165490 167180 137930 153440 167510 154290 181230 203010 183350 204480 199780 176470 208680 201310 211690 204660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 715490000 15538 1211 14723 29602;29603 23730;23731 23731 2 9606 Homo sapiens 0.033957389485067324 LDTIFFAK Unmodified 953.52222 0.52221879 2291 Q5LJB0;B2RB07;Q9Y5K5-2;Q9Y5K5-4;Q9Y5K5-3;Q9Y5K5;Q5LJA5;Q5LJA9 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes no 0 0 0 2 0 1 63.06 63.069 3 0.0060929 20012 20230619_1881_Aki_TMTPro18x_K_F2 87.616 45.507 92114 78322 81311 93990 74907 94789 85262 79431 101250 102910 93099 95724 113930 84808 95595 120340 99882 117560 85114 71829 83486 93625 78737 95428 85867 82877 101980 102550 96826 97149 114670 89787 97911 120110 95648 111630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82618000 15539 2291 14724 29604 23732 23732 1 9606 Homo sapiens 0.043598570456197194 LDTSQWPLLLK Unmodified 1312.7391 0.73908786 1807 O60832;A0A8Q3WLC8;A0A8Q3SIY6;A0A8Q3SIS9;A0A8Q3SJE8;A0A8Q3WLG7;A0A8Q3SIX2;C9IYT0;O60832-2;A0A8Q3WLE4;U5UA77;A0A8Q3WLW8;H7C2Q2;U5U7S7 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 0 0 0 2.5 0.5 1 1 64.133 64.153 3 0.00011796 20130 20230619_1882_Aki_TMTPro18x_K_F3 118.28 83.9 54205 54411 58221 58204 52011 65958 64890 60589 75431 70898 64172 64456 81394 69045 71070 79253 72428 85545 50224 49819 58732 58597 54925 65988 64999 62550 75822 70938 67131 65893 82036 71637 72574 79805 69376 81136 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214640000 15540 1807 14725 29605;29606 23733 23733 1 9606 Homo sapiens 0.09522787808509747 LDTVAGGLQGLR Unmodified 1198.667 0.66698555 4756 Q9Y6C2;A0A0A0MT20;Q9Y6C2-2 EMILIN1 EMILIN-1 yes no 0 0 0 1 0 1 55.241 55.241 3 2.3561E-07 16684 20230619_1880_Aki_TMTPro18x_K_F1 132.32 106.85 18421 13377 20308 20874 15838 23301 20311 20594 25583 26023 33929 39310 30948 27284 30628 31484 29958 38076 17036 12311 20416 20485 16973 23291 20398 21380 26079 26407 34324 38875 31663 28756 31122 31939 28727 36065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 964070000 15541 4756 14726 29607 23734 23734 1 9606 Homo sapiens 0.07559873454783883 LDVATDNFFQNPELYIR Unmodified 2054.0109 0.010905622 2538 C9JRU6;C9J0B2;C9J8R4;B4DM76;C9JVE2;Q96GG9 DCUN1D1 DCN1-like protein;DCN1-like protein 1 yes no 0 0 0 7 0 2 64.305 64.334 2;3 1.5732E-23 19793 20230619_1887_Aki_TMTPro18x_K_F7 200.77 182.67 145390 111620 129830 143730 116160 153200 151410 136730 148840 171430 160950 171930 181380 159130 161590 206000 174440 169380 134270 102480 133100 142610 122880 153750 150540 141810 152400 171390 165550 174090 183570 166960 165620 204090 166750 161280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 554660000 15542 2538 14727 29608;29609 23735;23736 23735 2 9606 Homo sapiens 0.026060605814109294 LDVGEAMAPPSHR Unmodified 1378.6663 0.66633362 2064 A8K548;Q8IZL8;C9JFV4;B4DR36;E7EV54;B4DEX7 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 0 0 0 4.5 0.5 1 1 43.904 43.966 3 0.00034721 11265 20230619_1883_Aki_TMTPro18x_K_F4 94.023 81.067 51967 44846 50451 59401 65278 64441 64385 68777 100610 53037 69074 70143 62759 59208 68049 62555 76273 70828 48057 41167 51648 58847 66617 64886 66054 69540 98997 55056 72086 70085 64570 61583 69524 63297 72860 67205 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60791000 15543 2064 14728 29610;29611 23737 23737 1 9606 Homo sapiens -0.007852892565779257 LDVGNAEVK Unmodified 943.49746 0.4974606 3626 Q53HT6;Q53G72;P51572;P51572-2;C9JMD7;C9JSP1;C9JQ75;C9J0M4 BCAP31 B-cell receptor-associated protein 31 yes no 0 0 0 4 0.632 1 3 1 47.559 47.618 2;3 5.4558E-07 12792 20230619_1883_Aki_TMTPro18x_K_F4 169.65 106.17 229150 163880 202640 209810 187000 212380 234230 221060 291970 270350 277630 277330 342810 255000 219790 335580 338240 338860 211520 150490 207880 208180 196930 214750 235190 226600 293600 270860 288210 280580 341830 268230 232830 335740 322480 321810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1453500000 15544 3626 14729 29612;29613;29614;29615;29616 23738;23739;23740;23741 23740 4 9606 Homo sapiens 0.023451771722420744 LDVGNFSWGSECCTR Unmodified 1786.7403 0.7403032 3707 Q5JR94;P62241 RPS8 40S ribosomal protein S8 yes no 0 0 0 7 0.707 1 2 1 59.265 59.321 2;3 4.3819E-42 17809 20230619_1886_Aki_TMTPro18x_K_F6 286.34 260.3 109690 92756 99202 94725 85318 104890 116900 106160 96306 111340 71831 67038 138680 82770 76595 128360 114890 112070 101370 84944 101440 95716 90599 105340 115390 108500 98513 110880 77715 70680 136280 87468 81370 127170 109540 106620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 952730000 15545 3707 14730 29617;29618;29619;29620 23742;23743;23744 23742 3 9606 Homo sapiens -0.12159733947169116 LDVTSVEDYK Unmodified 1167.5659 0.5659341 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 3 0.816 1 1 1 55.698 55.729 2;3 3.3256E-16 16500 20230619_1883_Aki_TMTPro18x_K_F4 205.14 163.16 46233 31184 34961 44707 34379 43527 46376 39929 56160 52725 50875 64009 68143 54783 48545 89670 77780 89788 42618 28680 36514 43994 36162 43998 46338 41419 56458 52960 53273 64183 68090 58668 51554 89408 74219 85236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87697000 15546 2633 14731 29621;29622;29623 23745;23746 23746 2 9606 Homo sapiens -0.011146230385747913 LDYDEDASAMLK Oxidation (M) 1385.6021 0.60206161 1242 B4E0U6;A0A140VKA6;P50502;Q0IJ56;Q1XBU6;B7ZA40;H7C3I1;Q8NFI4 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 0 1 0 2.8 0.748 2 2 1 52.066 52.113 2;3 8.6636E-06 15099 20230619_1882_Aki_TMTPro18x_K_F3 142.83 121.36 153680 94754 134250 137700 133210 134110 128050 128680 167670 149980 176970 148540 175030 165420 169530 201720 187810 200800 141740 87196 137950 135450 138330 135770 130700 132430 168870 150490 180850 151660 178560 171930 173680 201970 179610 190680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 804210000 15547 1242 14732 29624;29625;29626;29627;29628 23747;23748 23748 784 2 9606 Homo sapiens -0.07531533924043288 LDYDEDASAMLK Unmodified 1369.6071 0.60714699 1242 B4E0U6;A0A140VKA6;P50502;Q0IJ56;Q1XBU6;B7ZA40;H7C3I1;Q8NFI4 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 0 0 0 2.2 0.748 1 2 2 58.074 58.092 2;3 1.2649E-12 17838 20230619_1881_Aki_TMTPro18x_K_F2 227.94 188.92 154800 118920 133740 148970 111790 155430 138330 147690 148880 173330 164670 172470 191380 169890 165690 206310 187610 203660 142920 109150 137400 148050 118880 156420 138360 152090 151860 173740 169430 175060 193320 177230 170370 206470 179410 193410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 990740000 15548 1242 14732 29629;29630;29631;29632;29633 23749;23750 23749 2 9606 Homo sapiens -0.0628723006141172 LDYFLLSHSLLPALCDSK Unmodified 2091.0711 0.071063038 3515 Q5TZP7;P27695 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 0 3 0 1 64.735 64.766 4 6.9734E-24 20447 20230619_1882_Aki_TMTPro18x_K_F3 208.51 195.68 92495 77483 92072 101520 80222 77263 94175 88694 87251 105950 104580 106030 105950 95306 103260 106980 108470 121700 85537 71127 93425 100230 84510 80271 93979 90346 90061 106100 106570 107250 107990 99290 105360 108130 103830 115390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 328520000 15549 3515 14733 29634 23751 23751 1 9606 Homo sapiens 0.06917034920297738 LDYGQHVVAGTPGR Unmodified 1468.7423 0.74227576 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 0 7.5 0.5 1 1 41.316 41.35 3 5.6837E-12 10026 20230619_1888_Aki_TMTPro18x_K_F8 184.51 164.5 85390 60983 74058 81152 81967 103120 74252 87159 111660 103360 116300 111570 115640 96789 97284 131130 124750 128730 78808 56025 76337 80555 84516 102190 76520 90529 111800 103880 119000 112470 117190 102140 100960 130980 119120 122280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 639700000 15550 543 14734 29635;29636 23752 23752 1 9606 Homo sapiens 0.02665430915203615 LDYILGLK Unmodified 933.55352 0.55351892 299 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 RPS9 40S ribosomal protein S9 yes no 0 0 0 3 0 1 63.663 63.694 3 0.0060929 19969 20230619_1882_Aki_TMTPro18x_K_F3 87.616 35.621 97694 78362 85508 94532 80254 116810 108090 100490 129730 89692 56800 86635 95067 100580 89326 120040 117910 114280 90230 71884 87901 94418 84800 115980 107950 103520 127990 91264 63626 88524 95766 104230 92675 119910 112520 108610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152030000 15551 299 14735 29637 23753 23753 1 9606 Homo sapiens 0.08408430079714435 LDYLGVSYGLTPR Unmodified 1452.7613 0.76127986 4491 Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 yes no 0 0 0 2 0 1 61.89 61.9 2 7.7361E-14 19440 20230619_1881_Aki_TMTPro18x_K_F2 199.21 158.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15552 4491 14736 29638 23754 23754 1 9606 Homo sapiens 0.05300967486277841 LDYQESPPGK Unmodified 1132.5401 0.5400537 2801 CON__Q3T052 yes yes 0 0 0 4 0 1 45.872 45.915 2 0.028389 12119 20230619_1883_Aki_TMTPro18x_K_F4 80.239 67.186 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15553 2801 14737 29639 23755 23755 1 -0.020914724902013404 LDYVSMMCNEQAYSLAVEK Unmodified 2250.0007 0.000676566 1669 O75306;A0A7I2V4X8;B7Z792;O75306-2;A0A7I2YQG7;A0A7I2V596;Q53HG2;A0A7I2V4G5;A0A7I2YQD8;A0A7I2V3J6;A0A7I2V2B9;A0A7I2V4W5;A0A7I2V410;A0A7I2V630;A0A7I2V5G4;A0A7I2V5E2;B7Z9L2;A0A7I2V5D5;A0A7I2V517 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 7 0 1 63.296 63.329 3 4.5368E-05 19369 20230619_1887_Aki_TMTPro18x_K_F7 89.846 73.904 16166 11488 13901 17008 14251 15198 17370 16881 22999 13831 18123 17162 22434 14573 16072 17957 19122 18491 14919 10567 14334 16692 14868 15539 17499 17058 22881 14259 18998 17200 22429 15316 16632 18015 18262 17560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65639000 15554 1669 14738 29640 23756 23756 1 9606 Homo sapiens -0.07432374521977181 LEAAEDIAYQLSR Unmodified 1477.7413 0.7412727 2035 Q6FHP5;A8K401;P35232;Q6PUJ7;Q53FV0;C9JZ20 PHB;HEL-S-54e Prohibitin yes no 0 0 0 4.5 0.5 1 1 63.039 63.066 2 0.086446 19292 20230619_1885_Aki_TMTPro18x_K_F5 66.498 39.895 49688 36435 44785 60951 52020 62488 52275 59621 72228 63004 61101 75812 74385 72937 55545 81721 79676 100630 45878 33563 46113 59496 53556 62956 53316 61195 72014 63912 63871 76259 74701 75778 58296 82952 76146 95302 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68090000 15555 2035 14739 29641;29642 23757 23757 1 9606 Homo sapiens 0.021511717556450094 LEAAHFDEK Unmodified 1058.5033 0.50327426 2103 A8K7A1;Q9Y6V7 DDX49 Probable ATP-dependent RNA helicase DDX49 yes no 0 0 0 4 0.816 1 1 1 45.887 45.953 3 0.028641 12267 20230619_1882_Aki_TMTPro18x_K_F3 47.96 9.541 1060700 918060 1002000 1097600 1076100 1180600 1271400 1186800 1367800 1138900 1215000 1232700 1351600 1107700 1252700 1284700 1255500 1407300 980660 841860 1024600 1095000 1117100 1187800 1273200 1211000 1381200 1156900 1260100 1243200 1370100 1156500 1276000 1295000 1202300 1334800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2767600000 15556 2103 14740 29643;29644;29645 23758;23759 23758 2 9606 Homo sapiens -0.023637243161147126 LEAAHTLEDCASR Unmodified 1471.6725 0.67254121 4492 Q9H0B6;Q9H0B6-2;A8MZ87 KLC2 Kinesin light chain 2 yes no 0 0 0 3 0 1 41.745 41.807 3 0.00094073 10366 20230619_1882_Aki_TMTPro18x_K_F3 95.264 82.844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15557 4492 14741 29646 23760 23760 1 9606 Homo sapiens -0.04442815815718859 LEAALGEAK Unmodified 900.49165 0.49164694 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80;A0A6Q8PGH0 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 4.5 0.5 1 1 51.767 51.818 2 0.00034924 14794 20230619_1883_Aki_TMTPro18x_K_F4 138.98 57.679 584440 418250 494700 660480 904510 1007000 955020 926330 1268700 853480 906540 993990 969640 798400 878500 962620 1005200 945430 539300 385020 517480 650970 909160 989600 968530 949650 1259100 871600 950440 995970 983410 838670 902340 963590 960130 898370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1311800000 15558 1428 14742 29647;29648 23761;23762 23761 2 9606 Homo sapiens 0.03742078660570769 LEAALGEAKK Unmodified 1028.5866 0.58660996 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80;A0A6Q8PGH0 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 1 7 0 1 49.101 49.185 3 0.022799 13217 20230619_1887_Aki_TMTPro18x_K_F7 57.203 22.997 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15559 1428 14743 29649 23763 23763 1 9606 Homo sapiens 0.07346012131756652 LEAATQQNQQLR Unmodified 1398.7215 0.72154031 854 A0A087WYC0;A0A8I5KT73;A0A1W2PQY5;A0A8I5KNZ1;A0A8I5QJQ7;A0A6Q8KRG2;B7ZC06;A0A8I5KZ68;A0A8J9BZL8;Q08379;Q08379-2 GOLGA2 Golgin subfamily A member 2 yes no 0 0 0 5.5 0.5 1 1 39.746 39.835 3 0.00018379 9487 20230619_1886_Aki_TMTPro18x_K_F6 100.07 80.28 19703 15554 18382 18737 24142 21891 22547 21420 28464 25048 22472 21681 24635 16728 22782 22107 24840 19021 18205 14269 18866 18707 24552 21902 22999 22009 28430 25023 23428 21988 24961 17721 23306 21962 23706 18120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53310000 15560 854 14744 29650;29651 23764 23764 1 9606 Homo sapiens 0.038128405355337236 LEAEGEAMEDAAAPGNDR Unmodified 1844.7847 0.78467044 4337 Q96DP0 yes yes 0 0 0 1 0 1 49.734 49.734 3 1.4868E-18 14279 20230619_1880_Aki_TMTPro18x_K_F1 132.25 127.91 13587 11325 11277 12555 15146 15590 14278 12940 18205 16247 16020 17050 17365 17320 15331 19545 19730 17334 12547 10379 11713 12618 15406 15481 14561 13493 18239 16279 16604 17282 17607 17959 15890 19472 18819 16496 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43366000 15561 4337 14745 29652 23765 23765 1 9606 Homo sapiens -0.10393051319988444 LEAEGVPEVSEK Unmodified 1285.6402 0.64016167 1180 A0A140VJK1;O76003 GLRX3 Glutaredoxin-3 yes no 0 0 0 2 0.816 1 1 1 50.523 50.565 2 7.3783E-10 14698 20230619_1881_Aki_TMTPro18x_K_F2 218.18 151.49 146440 113580 123510 151230 139620 172150 158610 144550 182290 189130 175490 175530 198630 152080 141630 222770 200520 192300 135180 104310 127820 149820 144480 171800 159500 150810 184210 188370 181320 178070 199230 161430 148720 220760 191230 183000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181680000 15562 1180 14746 29653;29654;29655 23766;23767 23766 2 9606 Homo sapiens 0.008767200529746333 LEAESMGFFTK Oxidation (M) 1274.5853 0.58528933 232 B4DP84;H0YCN4;A0A024R3A2;Q9BTE7;J3QQL8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 yes no 0 1 0 6 0 1 57.158 57.23 3 0.00014124 16960 20230619_1886_Aki_TMTPro18x_K_F6 108.7 94.006 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15563 232 14747 29656 23768 23768 142 1 9606 Homo sapiens -0.041019900193077774 LEAFHER Unmodified 900.44537 0.44536545 3876 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 0 3.5 0.5 1 1 37.475 37.523 3 0.0019395 8580 20230619_1882_Aki_TMTPro18x_K_F3 129.68 72.402 210860 161840 196960 209150 252820 275140 230100 248540 326680 246480 261080 239140 286110 234140 221070 306840 309940 269730 194790 148590 202140 208160 257760 272580 236280 255560 324550 249220 271800 243180 288190 245530 231300 304850 295410 256730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 143650000 15564 3876 14748 29657;29658 23769;23770;23771 23769 3 9606 Homo sapiens -0.008839414508543086 LEAGDYADLVK Unmodified 1192.5976 0.59756858 3873 Q14008-2;Q14008;Q14008-3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 4.5 0.5 1 1 58.039 58.095 2 2.1632E-11 17527 20230619_1883_Aki_TMTPro18x_K_F4 196.27 137.29 41231 35680 41946 42448 35060 38508 42844 37363 43985 41263 46228 43734 48718 34019 46800 47065 43854 51294 38144 32717 42449 42271 37159 39224 42790 38388 44821 41568 47424 43977 49493 36144 47465 47318 42039 48647 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22079000 15565 3873 14749 29659;29660 23772;23773 23772 2 9606 Homo sapiens 0.008973697153578541 LEAGLNR Unmodified 771.4239 0.42390173 3741 P63218 GNG5 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 yes yes 0 0 0 4.5 0.5 1 1 39.257 39.324 2 0.0069751 9226 20230619_1885_Aki_TMTPro18x_K_F5 128.82 82.049 519740 331600 468180 606010 577470 568390 574280 607060 746690 415640 463430 406370 430740 346980 446440 300530 462830 356440 479540 306030 482280 588370 590940 578200 584350 612490 738520 430580 487040 411030 441390 357640 453730 306440 441940 338350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 520500000 15566 3741 14750 29661;29662 23774;23775 23775 2 9606 Homo sapiens 0.029046735204246943 LEAHSDWVR Unmodified 1111.5411 0.54105675 3660 P55735-2;P55735;P55735-4;P55735-3;A8MXL6;Q59FA6;Q53GB2 SEC13 Protein SEC13 homolog yes no 0 0 0 4 0 1 40.572 40.615 3 1.077E-10 9799 20230619_1883_Aki_TMTPro18x_K_F4 218.48 158.04 157110 129660 147330 160250 169710 216840 161370 168540 242590 181280 207690 228980 249340 200770 169120 260300 262620 264110 145210 118960 150920 160010 174710 213780 165690 175840 240980 184170 216560 229410 249380 211200 179040 260550 250380 250810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 282340000 15567 3660 14751 29663 23776 23776 1 9606 Homo sapiens -0.010252133306266842 LEAIEDDSVK Unmodified 1117.5503 0.55028404 1976 A6NJA2;B2RD79;P54578-2;P54578-3;P54578;D3DUG9;B3KTG4 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 1 0 1 52.834 52.834 3 0.00036496 15514 20230619_1880_Aki_TMTPro18x_K_F1 107.83 80.089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15568 1976 14752 29664 23777 23777 1 9606 Homo sapiens -0.0037890955561579176 LEAIITPPPAK Unmodified 1148.6805 0.68051035 3298 O75367;O75367-3;O75367-1;A0A8I5KRC6;A0A8I5KS04;A0A994J4J7;D6RCF2 H2AFY Core histone macro-H2A.1;Histone H2A yes no 0 0 0 1 0 1 57.696 57.696 3 0.010536 17550 20230619_1880_Aki_TMTPro18x_K_F1 72.2 56.047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15569 3298 14753 29665 23778 23778 1 9606 Homo sapiens 0.1121173123403878 LEALDANSR Unmodified 987.49852 0.49852324 3421 P09496-2;P09496-4;P09496-3;P09496;F8WF69 CLTA Clathrin light chain A yes no 0 0 0 2.5 0.5 1 1 44.251 44.329 2 8.0752E-05 11535 20230619_1882_Aki_TMTPro18x_K_F3 158.76 108.05 455710 369820 412090 463820 515750 465940 474080 488120 600570 551830 606160 613170 623360 486450 493760 564520 713700 633160 421030 339370 423960 460720 525880 471820 484380 498850 604860 556150 622250 615300 629410 510380 516830 569680 680180 600940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 905970000 15570 3421 14754 29666;29667 23779 23779 1 9606 Homo sapiens 0.004273915411431517 LEALITQTR Unmodified 1043.5975 0.597509 4661 Q9UHB9;B4DVI7;Q9UHB9-4;B3KMI9;Q96K98 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 0 8 0 1 55.498 55.56 2 0.013309 15935 20230619_1888_Aki_TMTPro18x_K_F8 83.168 61.02 461540 369250 397090 480440 413970 516870 489200 474080 546480 612030 615620 646160 702930 576860 567020 762830 667150 719950 426220 338990 409600 476360 431340 518740 490670 491050 556640 612120 632290 652190 708090 607190 585620 760580 637730 684070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81100000 15571 4661 14755 29668 23780 23780 1 9606 Homo sapiens 0.07745414506030102 LEALLEK Unmodified 814.48002 0.48001963 2915 E9PGC8;P78559;P78559-2 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 6 0 1 60.75 60.808 2 0.0060651 18451 20230619_1886_Aki_TMTPro18x_K_F6 110.81 16.145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15572 2915 14756 29669 23781 23781 1 9606 Homo sapiens 0.06535881637239527 LEALSVK Unmodified 758.4538 0.45380487 1241 A0A140VK94;F6WQW2;P43487-2;P43487;C9JXG8;D3DX26;Q5T0Z6;A0A8Q3SIW0;Q9C010;Q9C010-2 RANBP1;PKIB Ran-specific GTPase-activating protein;cAMP-dependent protein kinase inhibitor beta yes no 0 0 0 7 1 1 1 52.218 52.295 2 0.0078941 14497 20230619_1888_Aki_TMTPro18x_K_F8 127.12 30.047 1411900 906510 1026600 1224300 1072700 1453000 1183400 1139500 1880700 1631600 1839800 2219600 2258600 2466000 584220 4429600 577780 2611200 1300800 833350 1077100 1212600 1118200 1443900 1208000 1199500 1874200 1642500 1907400 2240100 2215700 2633000 646000 4305800 566960 2492000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2362100000 15573 1241 14757 29670;29671 23782 23782 1 9606 Homo sapiens 0.06491612465754315 LEAMCFDGVK Oxidation (M) 1184.5206 0.52058059 3595 P47813;X6RAC9 EIF1AX Eukaryotic translation initiation factor 1A, X-chromosomal yes no 0 1 0 5 0 1 51.424 51.499 3 0.00040562 14397 20230619_1885_Aki_TMTPro18x_K_F5 100.58 83.559 113310 94483 97799 97206 107980 111110 122570 107570 128600 134560 125900 116150 136180 108680 112110 131670 123830 123590 104670 86535 100790 98194 111710 111300 122890 110870 130640 133990 129670 118510 137470 113620 115180 131440 118370 117480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38792000 15574 3595 14758 29672 23783 23783 2264 1 9606 Homo sapiens -0.06429888096977265 LEAMCFDGVK Unmodified 1168.5257 0.52566596 3595 P47813;X6RAC9 EIF1AX Eukaryotic translation initiation factor 1A, X-chromosomal yes no 0 0 0 6 0.816 1 1 1 57.863 57.923 3 0.0002642 17230 20230619_1886_Aki_TMTPro18x_K_F6 114.97 99.703 150270 128980 146820 141360 109730 150620 158280 135660 146360 174520 151070 146600 172570 143080 140700 187490 165370 180220 138960 118180 148890 141930 118390 151250 156420 140730 150140 173420 155690 150000 173920 150100 145260 187140 158080 171200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 246840000 15575 3595 14758 29673;29674;29675 23784;23785 23784 2 9606 Homo sapiens -0.05185584234345697 LEAPELPVK Unmodified 994.5699 0.56989727 3042 H0YE28;Q8IZQ5 C11orf31;SELH Selenoprotein H yes no 0 0 0 5.5 0.5 1 1 55.348 55.418 3 0.012198 16016 20230619_1885_Aki_TMTPro18x_K_F5 68.371 41.273 65783 53960 63241 67287 80387 80577 78728 76101 83449 76601 79878 81090 92711 75887 81037 87516 87110 92215 60809 49512 64731 67030 82031 80388 79611 78068 84621 77544 82698 81958 93641 79089 82980 88007 83323 87517 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109180000 15576 3042 14759 29676;29677 23786;23787 23786 2 9606 Homo sapiens 0.07239511245813901 LEAPLEELR Unmodified 1068.5815 0.58152458 2051 A8K4T6;Q16401-2;Q16401;F2Z3J2 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes no 0 0 0 2.5 0.5 1 1 54.979 55.012 2 0.0029928 16612 20230619_1881_Aki_TMTPro18x_K_F2 101.25 43.441 119820 109310 115080 126280 132200 140370 142990 135230 153340 125360 129630 134300 139410 121600 140170 147490 129640 165150 110840 100190 117630 126340 136200 140790 143830 138280 154630 127550 134620 135540 142020 127240 141990 148760 124380 156550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290870000 15577 2051 14760 29678;29679 23788 23788 1 9606 Homo sapiens 0.04997708269138457 LEAQAYTAYLSGMLR Unmodified 1685.8447 0.84469192 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;B3KMI9 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 0 7.5 0.5 1 1 34.958 34.992 4 0.037161 7308 20230619_1887_Aki_TMTPro18x_K_F7 51.546 8.2386 100660 72905 98293 92632 104570 122210 108710 112140 108620 112830 113200 119680 121060 106060 105250 123890 141110 133560 92991 66941 100120 92329 108270 121070 109410 115240 110910 114190 116320 120720 122610 110800 109380 124700 134610 126780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88311000 15578 4661 14761 29680;29681 23789 23789 1 9606 Homo sapiens 0.029203358717950323 LEAQEQAFLAR Unmodified 1274.6619 0.66190017 4060 Q5T3I0;Q5T3I0-3;A0A0A0MRK1;E9PAV9;F8W895 GPATCH4 G patch domain-containing protein 4 yes no 0 0 0 4 0 1 52.636 52.659 2 1.8553E-08 15193 20230619_1883_Aki_TMTPro18x_K_F4 194.12 169.24 71400 59483 60773 64576 60128 73031 73449 64779 88553 78638 69634 74187 91939 77136 68406 107110 92371 94319 65948 54505 62646 64926 62962 73027 73715 67142 88619 78650 73324 75659 92039 81049 71511 106310 88162 89713 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35955000 15579 4060 14762 29682 23790 23790 1 9606 Homo sapiens 0.03555569592185748 LEAQLTENNIVK Unmodified 1370.7405 0.74054442 3236 Q5STK2;O15212;I7HJT1;A2AB88 PFDN6;HKE2 Prefoldin subunit 6 yes no 0 0 0 5 0 1 54.611 54.678 3 9.3197E-05 15681 20230619_1885_Aki_TMTPro18x_K_F5 112.02 49.495 86093 65629 64081 76357 74883 120590 86097 86529 125420 109180 107880 117240 132770 116680 81753 175320 164960 182950 79405 60195 67219 76771 77663 117700 87330 91320 124830 109480 112580 118750 132430 123480 89146 175340 157150 173620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153020000 15580 3236 14763 29683 23791 23791 1 9606 Homo sapiens 0.07000377106601263 LEASELFK Unmodified 935.4964 0.49639797 2174 E9PDF6;B0I1S9;O43795-2;O43795;B3KQI2;H7C2Y7 MYO1B Unconventional myosin-Ib yes no 0 0 0 5.5 0.5 1 1 57.831 57.894 2 0.0051745 17210 20230619_1886_Aki_TMTPro18x_K_F6 114.28 58.565 120780 87399 103850 120910 126000 142180 132540 135900 165940 147200 133570 139210 153950 119010 133230 158380 134050 149240 111470 80324 107360 119580 129420 141980 134250 139540 165900 147950 139490 141000 155420 125560 136040 157940 128360 141790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223630000 15581 2174 14764 29684;29685 23792 23792 1 9606 Homo sapiens 0.026069628033383196 LEASQQNSEEM Unmodified 1264.5241 0.52414564 3979 Q4VC05;Q4VC05-2 BCL7A B-cell CLL/lymphoma 7 protein family member A yes no 0 0 0 1 0 1 45.412 45.412 2 0.00080821 12467 20230619_1880_Aki_TMTPro18x_K_F1 108.81 97.656 45672 37923 36925 40077 44742 55061 46891 47671 67205 49347 59884 66356 69575 52632 50358 62494 74545 67489 42169 34741 38383 40502 46018 54369 47767 49250 66959 50341 62223 66123 69771 55289 52941 62887 71041 64075 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21919000 15582 3979 14765 29686 23793 23793 1 9606 Homo sapiens -0.0975354678939766 LEASQQNSEEM Oxidation (M) 1280.5191 0.51906026 3979 Q4VC05;Q4VC05-2 BCL7A B-cell CLL/lymphoma 7 protein family member A yes no 0 1 0 1 0 1 39.027 39.027 2 7.2054E-11 9648 20230619_1880_Aki_TMTPro18x_K_F1 176.6 159.28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15583 3979 14765 29687 23794 23794 2630 1 9606 Homo sapiens -0.10997850652029229 LEATINELV Unmodified 1000.5441 0.54407645 3097 H9ZYJ2;P10599;P10599-2 TXN Thioredoxin yes no 0 0 0 3.5 1.12 1 1 1 1 64.753 64.777 2 0.00049299 20454 20230619_1882_Aki_TMTPro18x_K_F3 127.12 105.57 137420 96716 92601 114210 109720 115090 121340 114890 135130 124900 105360 154260 156460 138160 107260 195310 169280 223890 126610 88751 98176 113920 113000 116350 122040 117710 135790 126610 112040 154680 155860 146080 113870 196630 161740 212150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 959120000 15584 3097 14766 29688;29689;29690;29691 23795;23796 23795 2 9606 Homo sapiens 0.04382617003523137 LEATLQEEAAIQQEHR Unmodified 1864.9279 0.92790427 2831 D3DVQ1;O95202 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes no 0 0 0 1.5 0.5 1 1 50.221 50.246 3 8.2601E-20 14590 20230619_1881_Aki_TMTPro18x_K_F2 213.55 197.15 75239 57812 70800 71309 68700 86722 77841 81603 95043 72122 91924 87979 108280 96030 82720 111080 112020 97702 69511 53054 72276 71116 71891 86371 78508 83455 95633 73951 95123 88985 108840 99534 86331 110560 106800 92992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 339170000 15585 2831 14767 29692;29693 23797 23797 1 9606 Homo sapiens 0.030037438534009198 LECADLLETR Unmodified 1218.5914 0.59143734 2038 A8K4A8;Q6PI48;Q9H9J7;Q9NVT8;A0A3B3IS01;A0A3B3IT01;A0A3B3ISK7;A0A3B3ITK9;Q9H9M6 DARS2 Aspartate--tRNA ligase, mitochondrial yes no 0 0 0 3 0 1 52.941 53 2 0.011101 15503 20230619_1882_Aki_TMTPro18x_K_F3 91.095 60.483 56320 43225 49548 54832 51543 68942 65476 65050 71325 62626 60481 59737 65959 52028 60563 68838 61318 70099 52006 39679 50984 54598 53864 68512 65375 66644 71882 63348 62806 60535 66863 54840 61771 68948 58722 66534 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63389000 15586 2038 14768 29694 23798 23798 1 9606 Homo sapiens -0.009114717877992007 LECDEECSALER Unmodified 1509.6076 0.60755769 3828 Q12986-2;Q12986;O43831 NFX1 Transcriptional repressor NF-X1 yes no 0 0 0 1 0 1 44.208 44.208 2 3.1568E-05 11965 20230619_1880_Aki_TMTPro18x_K_F1 136.5 106.76 14189 13360 13898 17807 17724 20164 18985 18790 22465 17188 23161 22366 22500 18134 17656 20210 23469 25084 13130 12261 14227 17638 18149 20174 19172 19253 22690 17623 23689 22337 22751 18964 18374 20540 22410 23767 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21057000 15587 3828 14769 29695 23799 23799 1 9606 Homo sapiens -0.12686178403851045 LECLLNNNK Unmodified 1116.5597 0.55974328 838 A0A8I5QKQ1;A0A8I5KT41;A0A8I5KQ63;A0A8I5KTU5;A0A087WWI6;A0A8I5KRG1;P61962;B4DH46 DCAF7 DDB1- and CUL4-associated factor 7 yes no 0 0 0 1 0 1 55.719 55.719 3 0.00068156 16708 20230619_1880_Aki_TMTPro18x_K_F1 106.68 74.268 32043 24100 34131 33765 29716 37608 34441 32010 39357 37597 36968 38979 42250 41169 41257 47272 44303 39180 29630 22148 34434 33347 31378 37590 34610 33250 39728 37760 38296 39592 42948 42679 42169 46944 42324 37318 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126520000 15588 838 14770 29696 23800 23800 1 9606 Homo sapiens 0.006125802489123089 LECVEPNCR Unmodified 1175.5063 0.50632751 3022;2213 H0Y5B4;H7BZ11;J3KQN4;P83881;B2R4V2;Q969Q0 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a;60S ribosomal protein L36a-like no no 0 0 0 2.5 0.5 1 1 40.89 40.956 2 1.7224E-05 9979 20230619_1882_Aki_TMTPro18x_K_F3 169.09 131.53 649310 443140 500170 504170 630140 643150 631760 576190 738220 656500 328410 346830 835810 435610 262300 843950 790350 707170 598630 406560 522410 506110 644390 638530 639680 595230 730900 650190 377920 369670 808630 469480 309080 831830 750520 673430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1887699999.9999998 15589 3022;2213 14771 29697;29698 23801;23802 23802 2 9606 Homo sapiens -0.07440540525226425 LEDAADVYR Unmodified 1050.4982 0.49818889 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;Q9BXJ9-4;A0A8V8TQT7 NAA15;NARG1 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 2 0.816 1 1 1 46.805 46.857 2 0.00011562 12962 20230619_1881_Aki_TMTPro18x_K_F2 153.08 121.71 339030 270310 298620 342920 329130 364560 361870 346510 412870 429620 461170 440430 463250 385000 396280 495600 503140 430480 313130 248100 307450 340570 340480 366600 364540 357530 419730 430060 470760 444910 469570 404740 410570 492350 479860 409830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 423050000 15590 2297 14772 29699;29700;29701 23803 23803 1 9606 Homo sapiens -0.025040281787369167 LEDAGVR Unmodified 758.39227 0.39226725 1206 A0A140VJT8;P13489;A0A024RC87;H0YCR7 RNH1 Ribonuclease inhibitor yes no 0 0 0 2 0 1 37.452 37.513 2 0.0073086 8663 20230619_1881_Aki_TMTPro18x_K_F2 126.2 126.2 72902 39709 88074 87341 132810 139850 114140 133170 116190 81729 125090 153770 113260 104140 133380 58498 148380 135260 67386 36787 88879 84894 133790 137170 116270 135060 118450 87538 127660 150970 116980 106670 135670 64075 141730 127710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96620000 15591 1206 14773 29702 23804 23804 1 9606 Homo sapiens 0.003406807664759981 LEDCTPQR Unmodified 1017.4549 0.45494386 720 A0A087WZU5;A0A024RCI0;B4DRB0;B4DUZ1;B3KQJ7;Q59ED5;O43657;A0A087WYV6 TSPAN6 Tetraspanin;Tetraspanin-6 yes no 0 0 0 2 0 1 35.295 35.351 2 0.0017876 7810 20230619_1881_Aki_TMTPro18x_K_F2 113.41 56.131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15592 720 14774 29703 23805 23805 1 9606 Homo sapiens -0.05308541227634578 LEDFFAR Unmodified 896.43922 0.43921744 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4;A0A8Q3WL93;A0A8Q3WLT0;A0A8Q3WL80;E7EM57;Q0PHS1;A0A8Q3WL83;E9PD92;A0A8Q3WL90;A0A2H4QGB2;A0A2H4QGB6;A7IZZ3;Q0PHS5;A0A2H4QGB8 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 5 0.816 1 1 1 59.739 59.778 2 0.0047435 17807 20230619_1885_Aki_TMTPro18x_K_F5 146.21 91.681 142770 101750 113350 132010 119050 178340 144990 142640 220230 183180 187630 279780 264550 256530 181860 329700 334970 509260 131680 93449 117860 131370 124490 175860 146940 149300 218750 186060 197930 278770 264080 269370 195700 339580 320220 481160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122330000 15593 1464 14775 29704;29705;29706 23806;23807 23806 2 9606 Homo sapiens -0.013144596823849497 LEDFRDYR Unmodified 1112.5251 0.52507234 387;1069 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;A0A494C1A0;P35609;P35609-2;A0A804HI95;B7Z2N5;Q08043;B2R8Y4;A0A087WSZ2;B4DZQ2;B7Z4K1;Q59FD9;B7Z4P6;Q4VAM3;F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;B4E337;B4DSX0 ACTN1;ACTN2;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 no no 0 0 1 4 0 1 44.846 44.89 3 0.0010557 11671 20230619_1883_Aki_TMTPro18x_K_F4 108.3 60.48 189360 172050 188160 146620 164520 144320 189880 211220 178600 227880 216790 171860 235350 173570 203180 286740 233760 202780 175210 157300 190580 150500 173070 147900 189810 211430 184370 227520 221140 177430 237920 185010 209320 281370 223150 193610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133290000 15594 387;1069 14776 29707 23808 23808 1 9606 Homo sapiens -0.026689195675317023 LEDGQTADGQTEEAAEPGEQLQTQK Unmodified 2672.2049 0.20492658 2324 B2RDV7;Q96G46;Q96G46-2;K7EJX8;K7EPA4;B4DLK3 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)];tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes no 0 0 0 1 0 1 48.654 48.654 3 5.8604E-35 13835 20230619_1880_Aki_TMTPro18x_K_F1 207.24 204.41 20991 16500 20913 17401 16258 22486 20702 20933 23387 24391 26231 26926 27795 22175 23496 24588 28054 29741 19405 15118 21164 17582 17413 22311 20711 21579 23790 24539 26849 27051 28105 23173 24225 24955 26809 28188 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23564000 15595 2324 14777 29708 23809;23810 23809 2 9606 Homo sapiens -0.06428769092417497 LEDGTEFDSSLPQNQPFVFSLGTGQVIK Unmodified 3052.5029 0.5029465 1472 Q53XJ5;A0A384NLA0;A0A494C1N0;P26885;F5H0N4 FKBP2 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase FKBP2 yes no 0 0 0 6.5 0.5 1 1 64.719 64.754 4 1.1249E-09 20218 20230619_1886_Aki_TMTPro18x_K_F6 118.67 102.9 20999 16966 19741 25696 18521 18626 21815 22090 25454 25232 26577 31165 28055 25855 28275 35835 30546 34909 19406 15602 20173 25126 19414 19449 21922 22429 25771 25507 27317 31192 28614 27357 28918 35774 29235 33151 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268800000 15596 1472 14778 29709;29710 23811 23811 1 9606 Homo sapiens 0.058795141711016186 LEDHEYKPLDPK Unmodified 1482.7355 0.73545904 3142 J3QK89;Q8IWX8;Q59ET1;B4DL82;B4DPM4 CHERP Calcium homeostasis endoplasmic reticulum protein yes no 0 0 1 4.5 1.12 1 1 1 1 44.62 44.691 4 7.6238E-06 11493 20230619_1885_Aki_TMTPro18x_K_F5 142.91 118.72 208870 150940 189110 211360 216560 250620 233260 229510 263070 241710 260220 263440 290760 233920 217530 275180 269900 272240 192840 138740 194320 208910 223370 249870 235130 236260 266190 244350 268400 265500 292240 244500 225700 275550 257750 258600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 376680000 15597 3142 14779 29711;29712;29713;29714 23812;23813 23813 2 9606 Homo sapiens 0.01340073243977713 LEDILESINSIK Unmodified 1372.745 0.7449611 2455 Q49AG2;B4DDR7;Q9Y3A6 TMED5 Transmembrane emp24 domain-containing protein 5 yes no 0 0 0 7.5 0.5 1 1 65.687 65.709 3 2.5563E-07 20392 20230619_1887_Aki_TMTPro18x_K_F7 160.52 107.83 50382 43106 48209 54434 50162 71793 55472 55889 65599 62804 57214 60330 65333 54810 52145 69093 65574 78413 46584 39552 49242 54245 52239 70867 55936 58370 65946 63050 59461 61168 65808 57504 54096 69664 62700 74331 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 111990000 15598 2455 14780 29715;29716 23814 23814 1 9606 Homo sapiens 0.07349841529526202 LEDLEVIQHR Unmodified 1250.6619 0.66190017 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 3.5 0.5 1 1 49.576 49.633 3 4.0699E-07 13951 20230619_1882_Aki_TMTPro18x_K_F3 173.24 101.73 127100 103970 118030 114390 119730 135580 135500 121150 158450 134030 131030 172370 179750 146830 126810 203150 208720 228710 117460 95291 120670 115000 124720 135190 136370 125170 159030 136000 138100 172360 179480 155320 134830 204400 199050 216880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 361870000 15599 2337;3778;3779 14781 29717;29718 23815 23815 1 9606 Homo sapiens 0.046595695921723745 LEDLIVK Unmodified 828.49567 0.49566969 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHJ0;A0A5F9ZHD4;A0A5F9ZI66;A0A5F9ZHH9;H0YEL7 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 6 0.816 1 1 1 59.946 60 3 0.0081388 18104 20230619_1886_Aki_TMTPro18x_K_F6 95.793 28.758 105320 90094 104690 117760 112500 129370 136270 126120 141570 149680 157260 157230 160240 141670 155850 181330 178650 176400 97410 82695 106620 116780 116890 129840 136160 129730 144590 150230 160760 158800 163300 148720 159950 181230 170700 167610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106660000 15600 1208 14782 29719;29720;29721 23816 23816 1 9606 Homo sapiens 0.07456168154283205 LEDLLRK Unmodified 885.52837 0.5283668 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 1 1.5 0.5 1 1 53.63 53.644 3 0.0046038 15843 20230619_1880_Aki_TMTPro18x_K_F1 113.14 40.998 223970 149970 152060 189280 159390 183100 175860 209880 314180 280050 280910 428860 453210 424750 203010 1428600 204570 886680 206320 137740 160780 187840 165960 186230 180640 214420 311010 283960 297940 430880 445640 490080 218200 1384800 200440 845410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 301040000 15601 150 14783 29722;29723 23817 23817 1 9606 Homo sapiens 0.08102375277144347 LEDPHVDIIR Unmodified 1205.6404 0.64043645 198 A0A024R2F9;Q9BTV4;A0A0S2Z5N2;Q8TEP9 TMEM43;FLJ00144 Transmembrane protein 43 yes no 0 0 0 2 0 1 46.665 46.744 3 0.04767 12934 20230619_1881_Aki_TMTPro18x_K_F2 56.225 33.751 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15602 198 14784 29724 23818 23818 1 9606 Homo sapiens 0.04584184563464078 LEDRETVIK Unmodified 1101.603 0.60298831 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3 DCTN1;DKFZp686I0746 Dynactin subunit 1 yes no 0 0 1 4 0 1 41.977 42.02 3 0.052214 10432 20230619_1883_Aki_TMTPro18x_K_F4 53.028 22.391 107270 78396 99997 106240 124910 113190 113720 119070 121190 119850 139310 120210 120950 107800 114840 138390 216530 119690 99071 72030 102560 105090 127290 114110 115590 121230 123760 121070 141140 121720 123900 113170 122580 137470 205520 114240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122360000 15603 1717 14785 29725 23819 23819 1 9606 Homo sapiens 0.05625093297840067 LEDSEVR Unmodified 846.40831 0.40831125 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24;E2PSM9 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 1 0 1 36.419 36.419 2 0.0049029 8542 20230619_1880_Aki_TMTPro18x_K_F1 145.04 90.258 50417 26448 65581 66253 96394 109320 78655 89034 82837 47423 80890 100570 85396 87429 97526 35544 85515 82694 46631 24567 65833 64104 97186 106690 80491 91214 83940 51840 83464 99125 87661 87835 97938 39424 81917 78054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42950000 15604 2414 14786 29726 23820 23820 1 9606 Homo sapiens -0.021036577872791895 LEDTENWLYEDGEDQPK Unmodified 2079.8909 0.89090965 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8;B0AZS1 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 0 0 1.5 0.5 1 1 61.208 61.213 3 0.00019869 19138 20230619_1881_Aki_TMTPro18x_K_F2 84.874 74.816 126930 104440 139260 135180 108260 95397 129410 142600 145070 203270 179840 172210 148110 151450 125600 171560 178170 172630 117470 95862 139910 133560 115240 100650 129880 144000 148530 201060 181390 175420 151310 157890 131280 172020 169930 163970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 819350000 15605 3544 14787 29727;29728 23821 23821 1 9606 Homo sapiens -0.10584017273686186 LEDTIRR Unmodified 901.49813 0.49812931 1220 A0A1B0GV75;A0A1B0GTB8;A0A1B0GWC0;A0A140VK13;A0A1B0GVF3;P23786;A0A1B0GUD9;A0A1B0GTM0 CPT2 Carnitine O-palmitoyltransferase 2, mitochondrial yes no 0 0 1 5 0 1 35.257 35.347 3 0.0049483 7682 20230619_1885_Aki_TMTPro18x_K_F5 116.3 35.836 39808 31855 39711 42630 57367 45349 52147 47606 55775 50172 57083 48664 50568 45823 48281 48345 59245 48954 36804 29254 40613 42199 57902 45747 52976 48557 56654 50534 58164 49401 51736 47487 49736 48585 56508 46528 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29623000 15606 1220 14788 29729 23822 23822 1 9606 Homo sapiens 0.043440166119466994 LEDTYFDRDVEK Unmodified 1528.7046 0.70455285 79 Q8N995;A0A024R059;Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes no 0 0 1 3.5 0.5 1 1 50.825 50.876 3 5.71E-05 14513 20230619_1882_Aki_TMTPro18x_K_F3 124.47 102.56 594280 398400 511180 477490 162020 214500 325390 344650 406180 516340 430350 250630 560710 361600 259010 812230 457690 283200 548260 365720 520590 472690 200970 239980 321770 347870 410760 504390 444410 271790 553210 393060 282710 777650 434780 275230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 427160000 15607 79 14789 29730;29731 23823 23823 1 9606 Homo sapiens -0.03865124860908509 LEDVLPLAFTR Unmodified 1272.7078 0.70778773 4054 Q5SSJ5;Q5SSJ5-2;B0QZK4;Q5SWC8;Q5SSJ5-3 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 4.5 3.5 1 1 64.036 64.046 2 1.7459E-08 19542 20230619_1888_Aki_TMTPro18x_K_F8 175.41 143.19 361960 314520 339900 383170 329410 396920 411560 433490 430540 401590 355600 397790 439830 401480 379470 470960 445810 508990 334660 288460 347300 381550 345440 401070 410820 439410 434680 407470 372400 404140 443660 417670 391110 473990 426350 482800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 511000000 15608 4054 14790 29732;29733 23824;23825 23825 2 9606 Homo sapiens 0.08234214774415705 LEEALHK Unmodified 838.45487 0.45486751 4392 Q96RF0-2 SNX18 Sorting nexin-18 yes yes 0 0 0 4 0 1 44.153 44.198 3 0.031856 11359 20230619_1883_Aki_TMTPro18x_K_F4 73.931 26.082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15609 4392 14791 29734 23826 23826 1 9606 Homo sapiens 0.02917826834675452 LEEDGGCVIGGDR Unmodified 1375.6038 0.60379294 2539 B4DM84;Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes no 0 0 0 1 0 1 45.412 45.412 2 1.6731E-05 12470 20230619_1880_Aki_TMTPro18x_K_F1 127.17 102.79 20692 18546 18279 20878 19713 24729 23320 21124 25044 24987 24983 28442 29462 27254 22668 29713 36029 33579 19126 16995 18812 20943 20487 24629 23351 21941 25422 25158 25851 28668 29635 28277 23944 30015 34326 31862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21169000 15610 2539 14792 29735 23827 23827 1 9606 Homo sapiens -0.06898480115410166 LEEDINSSMTNSTAASRPPVTLR Oxidation (M) 2504.2177 0.21768029 3929 Q15365;Q53SS8 PCBP1 Poly(rC)-binding protein 1 yes no 0 1 1 5 0 1 46.88 46.957 3 3.3028E-19 12457 20230619_1885_Aki_TMTPro18x_K_F5 156.87 140.16 28197 21696 26010 29914 22976 30094 28257 28170 42692 38015 37927 57145 57136 56756 25632 76849 70359 99858 26047 19934 26588 29525 24317 30358 28628 29192 42492 38502 40061 57135 56323 59611 29381 78006 67091 94494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136730000 15611 3929 14793 29736 23828 23828 2601 1 9606 Homo sapiens 0.025740155567746115 LEEDISSSMTNSTAASRPPVTLR Oxidation (M) 2477.2068 0.20678125 3930 Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DRD7;B4DLC0;F8W0G4;F8VXH9;F8W1G6;H3BND9 PCBP2 Poly(rC)-binding protein 2 yes no 0 1 1 5 0 1 47.539 47.616 3 4.1935E-08 12741 20230619_1885_Aki_TMTPro18x_K_F5 100.59 90.442 15403 11610 9921.3 15093 12105 13984 14637 13642 19702 17198 15450 21223 25772 24733 15695 36835 25533 41745 14194 10661 10601 14932 12496 14215 14756 14065 19622 17330 16533 21504 25532 26032 16804 37019 24447 39538 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52833000 15612 3930 14794 29737 23829 23829 2606 1 9606 Homo sapiens 0.02726613182494475 LEEENHEAATCLEDVVYR Unmodified 2175.9743 0.97426212 637 F5H872;A0A024RAW0;Q13503 MED21;SURB7 Mediator of RNA polymerase II transcription subunit 21 yes no 0 0 0 2 0 1 53.449 53.477 3 2.7339E-07 15975 20230619_1881_Aki_TMTPro18x_K_F2 91.589 72.757 18116 15734 19295 22127 15963 21296 18965 19280 27142 25575 22346 23821 24395 24967 24244 27026 27663 28598 16767 14453 19472 21799 16966 21539 19204 20008 27003 25471 23254 24292 24862 25813 24860 27207 26441 27143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26364000 15613 637 14795 29738 23830 23830 1 9606 Homo sapiens -0.06668604097512798 LEEERER Unmodified 959.46722 0.46722311 288;1289 Q6Y7W6;Q6Y7W6-5;Q6Y7W6-4;A0A024R4A5;Q6Y7W6-3;I1E4Y6;A0A7I2V361;A0A7I2V3H0;A0A7I2V516;A0A7I2V3H7;B4DZM1;P55196-5;A8MQ02;P55196;P55196-1;H0Y8U8;A0A804HJ20;A0A1P7ZIN0;G1UI22;J3KN01;P55196-2;P55196-6;P55196-3;Q5TIG5;H0Y948 GIGYF2;TNRC15;MLLT4 PERQ amino acid-rich with GYF domain-containing protein 2;Afadin no no 0 0 1 1 0 1 28.147 28.147 3 0.0073847 5278 20230619_1880_Aki_TMTPro18x_K_F1 110.03 7.7295 18000 8079 25660 28827 37756 35692 33887 40928 25674 14584 36761 43628 23593 25684 34163 10461 35716 32595 16656 7576 25628 27456 38059 35650 34165 40737 26981 17012 36689 42331 25030 26261 34503 12079 34136 30736 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11392000 15614 288;1289 14796 29739 23831 23831 1 9606 Homo sapiens -0.014131814929442044 LEEFGRPK Unmodified 974.51853 0.5185304 3635 P52735-3;P52735-2;P52735 VAV2 Guanine nucleotide exchange factor VAV2 yes no 0 0 1 7.5 0.5 1 1 43.469 43.514 3 0.0025766 10704 20230619_1887_Aki_TMTPro18x_K_F7 109.71 59.901 114940 89951 109990 133530 142730 176140 143580 149090 188690 136050 183250 206830 149640 151830 189360 158820 195950 204720 106220 82710 112820 131720 145920 174140 146090 153840 189180 140440 187020 204830 155860 158690 192050 162160 187490 193920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85566000 15615 3635 14797 29740;29741 23832 23832 1 9606 Homo sapiens 0.030251872717713013 LEEGEVAMGR Oxidation (M) 1105.5074 0.50737336 1532 A0A3B3IUD7;Q14690 PDCD11 Protein RRP5 homolog yes no 0 1 0 1 0 1 38.455 38.455 2 0.025831 9401 20230619_1880_Aki_TMTPro18x_K_F1 68.846 54.639 37016 25188 29414 35667 50782 52244 44979 42143 61683 43998 55310 64406 58006 48832 46746 65020 70353 71426 34133 23162 30872 35347 50920 51336 46166 43807 61581 45030 57209 63935 58610 51735 49136 65376 67092 67769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38244000 15616 1532 14798 29742 23833 23833 1012 1 9606 Homo sapiens -0.04116002884711634 LEELALAK Unmodified 885.51713 0.51713341 4763 yes no 0 0 0 5 0 1 57.1 57.159 3 0.0055385 16741 20230619_1885_Aki_TMTPro18x_K_F5 78.77 0 + 27653 21803 23527 24003 22274 28112 27770 28488 28433 29127 30173 33270 31767 24788 25852 33271 33241 32358 25533 19985 24232 24126 23416 28120 27709 29089 29003 29516 30963 33294 32081 26302 26841 33225 31728 30747 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19575000 15617 4763 14799 29743 23834 23834 1 9606 Homo sapiens 0.06979553183009557 LEELHVIDVK Unmodified 1193.6656 0.66558856 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;F5GY55;B7Z2A1;F5GWI0;F5H2L3;A0A7P0Z4L2 DDB1 DNA damage-binding protein 1 yes no 0 0 0 5.5 0.5 1 1 54.659 54.731 3 0.0004384 15756 20230619_1885_Aki_TMTPro18x_K_F5 105.46 57.612 407690 329530 365430 397000 352660 409820 408210 374770 453780 486260 491940 452400 500840 435870 435870 534560 478000 483820 376630 302280 374750 395560 369100 412660 409810 388400 461420 484470 503010 460430 507850 455300 447250 532500 456980 460050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1437500000 15618 1710 14800 29744;29745 23835;23836 23835 2 9606 Homo sapiens 0.07650239366012102 LEELTMDGAK Unmodified 1105.5325 0.53252548 2138 A8K9K6;O00567;A0PJ92;A0A494C128;Q5JXT2;H0YDU4 NOP56 Nucleolar protein 56 yes no 0 0 0 4 0 1 55.13 55.141 3 0.00034545 16303 20230619_1883_Aki_TMTPro18x_K_F4 110.53 74.881 38910 33336 33332 35252 32765 40849 40796 37430 50141 46443 44843 49383 57467 48552 45425 59657 50903 56950 35946 30536 34336 35532 34357 40807 40942 38724 50348 46566 46833 49975 57682 50694 46786 59579 48693 54098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28703000 15619 2138 14801 29746 23837 23837 1 9606 Homo sapiens -0.016019480821341858 LEELWLDGNSLCDTFR Unmodified 1966.9095 0.90947702 4657 Q9UBU9;E9PIN3;Q59E96;Q9UBU9-2;B4E227;B4E3J0 NXF1 Nuclear RNA export factor 1 yes no 0 0 0 5 0 1 64.85 64.895 3 7.3931E-06 20133 20230619_1885_Aki_TMTPro18x_K_F5 107.82 95.659 4640.2 3684 5272.4 5271.4 5434.9 5354.5 5269.9 6772.3 6173 6053.5 5644.1 5859.7 5735 5355.6 5808.6 6639.8 6031.9 6416.1 4294.7 3385.8 5304.6 5195.3 5622.1 5440.3 5356.4 6795.9 6219.5 6147.7 5822.3 5941.6 5857.6 5606.9 5922.5 6637 5771.8 6095 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28861000 15620 4657 14802 29747 23838 23838 1 9606 Homo sapiens -0.035301341128615604 LEELYTK Unmodified 894.46985 0.46984887 179 Q53GN6;A0A024R201;Q9UNM6;J3KNQ3;B2RBM7;Q9Y6E3;Q9UNM6-2;E9PL38;E9PPD2;E9PQG3;Q5HYL3;F8W8J6 PSMD13;DKFZp686H16220 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 5 0.816 1 1 1 53.474 53.546 2;3 0.006312 15450 20230619_1886_Aki_TMTPro18x_K_F6 109.86 38.95 53763 42587 44801 52590 52261 61858 58494 60253 73804 57379 68459 71548 68388 59458 55938 86310 80089 69598 49634 39078 46426 52403 53939 61795 59078 61585 74038 58602 70489 71641 69250 63100 58600 85276 76322 66320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166580000 15621 179 14803 29748;29749;29750 23839;23840;23841 23841 3 9606 Homo sapiens 0.018392739120031365 LEEQRPER Unmodified 1055.536 0.53597137 986 A0A0P1J1R0;Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;A0A024RDY2;E9PJF7;P13693-2;Q9HAU6 TPT1;TPT1P8 Translationally-controlled tumor protein;Putative translationally-controlled tumor protein-like protein TPT1P8 yes no 0 0 1 1.5 0.5 1 1 28.992 29.028 3 0.0047054 5291 20230619_1881_Aki_TMTPro18x_K_F2 95.909 65.655 67894 34878 83110 80773 110480 121570 94347 100240 99868 80487 113560 110680 100220 79765 108670 49688 102200 103170 62750 32353 83559 78237 112110 119250 96274 103320 101880 83338 115290 109870 103030 81801 109660 53610 97858 97418 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 347920000 15622 986 14804 29751;29752 23842;23843 23843 2 9606 Homo sapiens 0.0104248280676984 LEESTNYNQQLR Unmodified 1493.711 0.71103521 2857 Q3V6T2;D6W5D1;Q3V6T2-2;A0A2U3TZV9;A0A2R8Y7B1;Q3V6T2-3;Q3V6T2-4;Q3V6T2-5;A0A2R8YG73;A0A2R8Y4X4;A0A2R8Y4W8;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y885;A0A2R8YDS8;A0A2R8Y7D4;H7C2C6;H0Y470;A0A2R8YGU1;H0Y7U8 CCDC88A;KIAA1212 Girdin yes no 0 0 0 4 0 1 42.984 43.028 2 9.6844E-18 10846 20230619_1883_Aki_TMTPro18x_K_F4 190.96 166.17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15623 2857 14805 29753 23844 23844 1 9606 Homo sapiens -0.016071869095412694 LEESYDMESVLR Unmodified 1469.6708 0.67080988 69 A0A2R8YD12;A0A024QZX3;A0A024QZX5;A0A087X1N8;P35237;A0A024QZT8;Q8IXH2 SERPINB6 Serpin B6 yes no 0 0 0 2 0 1 58.076 58.091 3 0.00015231 17855 20230619_1881_Aki_TMTPro18x_K_F2 86.772 79.402 15191 13768 16235 15336 17713 16101 13650 19137 21972 17347 19649 22972 21563 18239 18508 23966 20598 30000 14064 12615 16412 15382 18161 16306 14275 19278 21812 17800 20370 22907 21804 19280 19024 24308 19753 28396 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12288000 15624 69 14806 29754 23845 23845 1 9606 Homo sapiens -0.045238696243131926 LEETLPVIR Unmodified 1068.6179 0.61791009 3263 O43681;B4DEE5 ASNA1 ATPase ASNA1 yes no 0 0 0 4.5 0.5 1 1 54.805 54.845 2 6.923E-05 15785 20230619_1885_Aki_TMTPro18x_K_F5 160.63 109.93 317470 234470 285570 311080 286070 348790 323820 311230 348600 406110 408810 433230 452670 370500 385290 440550 443570 508780 293130 215370 292950 308270 298450 348870 325150 323130 356460 406080 418660 436330 457310 388140 396520 445220 424290 482280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 240910000 15625 3263 14807 29755;29756 23846 23846 1 9606 Homo sapiens 0.08634585165850694 LEEVLTNK Unmodified 944.51786 0.51786169 2269 V9HWG9;B2R983;P78417;Q5TA02;P78417-3 HEL-S-21;GSTO1 Glutathione S-transferase omega-1 yes no 0 0 0 5 0 1 54.716 54.783 2 0.062426 15771 20230619_1885_Aki_TMTPro18x_K_F5 76.221 23.74 36381 30116 36256 38343 40345 47945 37797 44451 47429 51577 62281 65954 76389 56851 46278 73194 80564 81334 33642 27638 36915 38168 41558 47661 38592 45821 48390 52171 63799 66021 76055 59850 49626 73655 76757 77162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70961000 15626 2269 14808 29757 23847 23847 1 9606 Homo sapiens 0.04338347832049294 LEEYITTSK Unmodified 1082.5496 0.54955575 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 6 0 1 54.36 54.437 3 0.00094357 15762 20230619_1886_Aki_TMTPro18x_K_F6 98.009 77.489 177350 157270 175980 185540 187440 207750 195560 193000 217640 234810 273810 265030 275130 222550 214260 293000 282520 260530 164070 144190 179110 185370 194020 208080 197470 199320 222750 235950 278200 266370 277820 234660 223140 291260 269500 247870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190580000 15627 1432 14809 29758 23848;23849 23848 2 9606 Homo sapiens 0.011582957953123696 LEEYTGTMMK Oxidation (M) 1217.5308 0.53081092 3326 O76038;A0A994J4C2 SCGN Secretagogin yes no 0 1 0 5 0 1 49.56 49.636 2 0.0061415 13598 20230619_1885_Aki_TMTPro18x_K_F5 83.206 65.474 21929 22452 22512 19479 15821 16765 22425 22808 24815 52209 53711 56776 65588 48721 53837 81315 61913 64032 20314 20522 22700 19919 17132 17329 22335 23660 26404 51270 54279 57194 65950 52245 55552 80133 59175 60993 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8403200 15628 3326 14810 29759 23850;23851 23851 1953 2 9606 Homo sapiens -0.06925325162387708 LEEYTGTMMK Unmodified 1201.5359 0.5358963 3326 O76038;A0A994J4C2 SCGN Secretagogin yes no 0 0 0 6 0 1 54.729 54.806 3 6.7615E-05 15944 20230619_1886_Aki_TMTPro18x_K_F6 135.86 105.47 43732 37572 46893 36180 27540 32331 41906 42820 49725 91268 70185 80726 104480 73832 74928 111090 85686 93434 40475 34389 47018 36671 30536 33261 41710 44288 51258 89240 72595 82165 104030 78412 77508 109930 81934 88903 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42267000 15629 3326 14810 29760 23852 23852 1 9606 Homo sapiens -0.05681021299756139 LEFEETEEPDFTALCQK Unmodified 2084.9249 0.92485231 778 B4DTN0;A0A3B3IS71;A0A024RDV3;Q59HH0;P06400;A0A2R8YFL6 RB1 Retinoblastoma-associated protein yes no 0 0 0 4 0 1 62.311 62.315 3 0.00029763 19328 20230619_1883_Aki_TMTPro18x_K_F4 78.69 63.535 60466 62082 75880 67367 44381 31932 65358 59442 22650 22658 20675 11397 19110 15029 29739 17180 17976 17547 56118 56846 75249 67225 48857 35687 63434 57915 25415 24465 21235 12267 20037 15517 29335 17291 17310 16664 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13041000 15630 778 14811 29761 23853 23853 1 9606 Homo sapiens -0.07421312106316691 LEGDAALNR Unmodified 957.48796 0.48795855 2079 A8K5T7;Q9Y2Z0;B4DYC6;Q9Y2Z0-2;A8K7W3 SUGT1 Suppressor of G2 allele of SKP1 homolog yes no 0 0 0 2.5 0.5 1 1 40.319 40.384 2 1.0726E-05 9971 20230619_1881_Aki_TMTPro18x_K_F2 172.11 102.12 288020 208430 274890 309970 315450 354670 318790 300910 387060 326020 355640 325040 340860 275100 293350 309860 357160 279810 266030 191720 281170 305080 324710 353890 323290 311870 389020 328290 365450 328370 346050 287280 302710 309150 340570 266370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220490000 15631 2079 14812 29762;29763 23854;23855 23854 2 9606 Homo sapiens 0.007514088867083046 LEGDHTIR Unmodified 939.47739 0.47739386 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B7Z3E7;A8KA50 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 3 0 1 32.46 32.532 3 0.00094206 6578 20230619_1882_Aki_TMTPro18x_K_F3 111.82 84.339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15632 1984 14813 29764 23856 23856 1 9606 Homo sapiens 0.0052342623230288154 LEGDSTDLSDQIAELQAQIAELK Unmodified 2486.2388 0.23879289 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5;Q99529 MYH9 Myosin-9 yes no 0 0 0 5 0 1 66.808 66.85 3 1.9179E-08 20918 20230619_1885_Aki_TMTPro18x_K_F5 105.06 88.185 4015.3 2146.2 1972.4 2611.4 1836.3 4831.8 2999.3 2721.9 3052.3 4510.9 4941.7 4510.9 6044.8 4681.3 2846.9 5045.9 3747.4 4858.4 3689.2 1972.7 2179.2 2625 1976.9 4661.3 2958.1 2973.2 3186.7 4463.7 5021.8 4586.5 5977.5 4844.7 3013.5 5048.1 3584.5 4612.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15267000 15633 148 14814 29765 23857 23857 1 9606 Homo sapiens 0.055123041373008164 LEGEACGVYTPR Unmodified 1350.6238 0.6238001 3471 P18065;Q59FF1 IGFBP2 Insulin-like growth factor-binding protein 2 yes no 0 0 0 3.5 0.5 1 1 45.289 45.349 2 6.6448E-08 11873 20230619_1883_Aki_TMTPro18x_K_F4 152.7 125.6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15634 3471 14815 29766;29767 23858;23859 23859 2 9606 Homo sapiens -0.03748684384800072 LEGEHERDLESTSR Unmodified 1656.7703 0.770341 1665 A0A7I2V4I5;Q5T200-2;Q5T200;B3KQG8 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 0 0 1 1 0 1 32.503 32.503 4 1.0271E-21 6996 20230619_1880_Aki_TMTPro18x_K_F1 222.75 189.07 27445 14553 25576 22594 30633 22468 30023 31593 33565 31246 28751 29125 32749 33745 26042 35941 31688 30436 25307 13414 26181 22167 31317 22958 30419 31621 33816 31534 29899 29830 33026 34739 26965 35751 30256 28971 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40265000 15635 1665 14816 29768 23860 23860 1 9606 Homo sapiens -0.03177335685995786 LEGEVTPNSLSTSYK Unmodified 1623.7992 0.79918151 4207 Q8IWZ3-6;Q8IWZ3-4;Q8IWZ3;H0Y4P6;H0Y472;H0Y785;Q9H059;Q8IWG5;H0Y7Y3;A0A0A0MQZ8;Q9H7X4 ANKHD1;DKFZp586G1024 Ankyrin repeat and KH domain-containing protein 1 yes no 0 0 0 6 0 1 53.48 53.557 3 0.0035714 15425 20230619_1886_Aki_TMTPro18x_K_F6 70.47 51.638 41380 26344 33294 34437 33478 43089 35660 40103 55922 35618 37755 35179 38990 32059 39243 35232 33802 36945 38148 24210 34508 34224 34929 42821 36453 41036 55031 36271 39627 35639 39758 33351 39579 35467 32416 35061 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38857000 15636 4207 14817 29769 23861 23861 1 9606 Homo sapiens 0.01223388890412025 LEGFHTQISK Unmodified 1158.6033 0.60332266 1053 A0A384NQ35;A0A0K0K1L8;Q06323-3;Q06323;Q06323-2;Q86SZ9;H0YLU2;H0YKK6 PSME1 Proteasome activator complex subunit 1 yes no 0 0 0 5.67 3.3 1 2 46.563 46.587 3 1.3439E-16 12133 20230619_1888_Aki_TMTPro18x_K_F8 165.63 103.98 188380 155260 172920 193690 202150 248520 224680 236540 253150 245370 275350 302580 290130 258020 261410 302390 325690 344280 174080 142460 177570 193140 208510 246770 226140 242650 257150 249250 282290 303060 294410 269950 270100 305380 311130 326490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 875580000 15637 1053 14818 29770;29771;29772 23862;23863;23864 23864 3 9606 Homo sapiens 0.030365130177187893 LEGIGQFHCR Unmodified 1215.5819 0.58187571 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;A0A669KB06 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 0 7.5 0.5 1 1 43.605 43.65 3 3.3912E-10 10955 20230619_1888_Aki_TMTPro18x_K_F8 208.63 188.11 48664 34349 46339 49413 59371 55174 57292 53767 63887 65938 59905 57139 65225 49782 54527 73246 63055 65915 44942 31585 47470 48726 60506 55339 58077 55350 64605 65717 61857 58180 65863 52861 56212 72756 60268 62674 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70233000 15638 1566 14819 29773;29774 23865 23865 1 9606 Homo sapiens -0.0172919528267812 LEGIVNK Unmodified 771.44905 0.44905385 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491;A0A7I2V4A5;H7BZR6;C9J9M4 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 7.5 0.5 1 1 50.109 50.187 2 0.0096238 13584 20230619_1888_Aki_TMTPro18x_K_F8 119.07 48.805 1008900 695470 863360 1010000 1101100 1221800 1111000 1056200 1458700 1195500 1295900 1198000 1357400 1070100 1053100 1211200 1466800 1269800 930830 639660 893660 996300 1126200 1215300 1129900 1094200 1459200 1201600 1338800 1212000 1368900 1116100 1099800 1217800 1398100 1206200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 492340000 15639 832 14820 29775;29776 23866;23867 23867 2 9606 Homo sapiens 0.05418728323002142 LEGLGSSEADQDGLASTVR Unmodified 1903.9123 0.91231379 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 2 0 1 53.449 53.477 3 1.7108999999999998E-72 15931 20230619_1881_Aki_TMTPro18x_K_F2 250.08 229.69 67212 64269 68059 80654 80474 103930 91822 81583 81208 83425 92243 87417 81381 70438 92222 76390 84516 71716 62221 58944 69364 80368 82978 102770 91575 84967 83771 84334 93656 87981 83905 73515 93069 76478 80850 68213 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 275630000 15640 673 14821 29777 23868 23868 1 9606 Homo sapiens -0.003485874543457612 LEGMLSQSVSSQYNMAGVR Oxidation (M) 2071.9667 0.96667432 2938 E9PMI6;J3KN38;P54105;Q9P1H0 CLNS1A Methylosome subunit pICln yes no 0 1 0 1.5 0.5 1 1 57.503 57.511 3 2.7411E-07 17472 20230619_1880_Aki_TMTPro18x_K_F1 102.84 86.346 122190 107190 121390 129370 102960 116410 121990 119010 138090 130780 122480 116180 135010 100670 126060 142920 140950 122630 113030 98298 123150 128680 108940 118770 122430 121760 139170 131100 126910 118130 136890 106640 129250 141760 134590 116750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 187380000 15641 2938 14822 29778;29779 23869;23870 23869 1748 2 9606 Homo sapiens -0.026430348987560137 LEGMLSQSVSSQYNMAGVR Unmodified 2055.9718 0.9717597 2938 E9PMI6;J3KN38;P54105;Q9P1H0 CLNS1A Methylosome subunit pICln yes no 0 0 0 2 0 1 61.097 61.107 3 7.2118E-20 19083 20230619_1881_Aki_TMTPro18x_K_F2 186.68 169.6 31724 23513 30566 26967 27845 31083 28193 28786 34855 30149 28600 31785 33911 30273 28380 32239 33833 30703 29308 21566 31079 27020 29164 31072 28625 29601 34884 30461 29889 32130 34196 31371 29276 32275 32297 29190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146750000 15642 2938 14822 29780 23871 23871 1 9606 Homo sapiens -0.013987310361699201 LEGNTVGVEAAR Unmodified 1214.6255 0.62551466 162 A0A024R1U0;P46060;B4DY16;B0QYT5;B0QYT4 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 0 3 0 1 42.084 42.146 2 1.1975E-09 10510 20230619_1882_Aki_TMTPro18x_K_F3 204.34 169.24 171050 119900 142370 170820 167950 202430 179290 176280 262160 220830 220260 221030 243040 192160 168080 242340 260670 204640 157800 110250 147600 168630 173090 201610 182590 183080 260630 220940 228820 223400 243780 201830 177730 240420 248130 194970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206490000 15643 162 14823 29781 23872 23872 1 9606 Homo sapiens 0.026786926954628143 LEGQGDVPTPK Unmodified 1139.5823 0.58225287 2079 A8K5T7;Q9Y2Z0;B4DYC6;Q9Y2Z0-2;A8K7W3 SUGT1 Suppressor of G2 allele of SKP1 homolog yes no 0 0 0 4 0 1 45.497 45.541 2 9.2047E-06 11965 20230619_1883_Aki_TMTPro18x_K_F4 149.23 109.19 51108 38907 47188 46708 52438 56039 49398 47974 66040 52127 66518 57246 61269 51581 49865 67232 66271 61880 47208 35697 48330 46657 53996 55785 50504 49684 66290 52657 67907 57762 62168 54212 51908 66959 63218 58847 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33237000 15644 2079 14824 29782 23873 23873 1 9606 Homo sapiens 0.018045029181848804 LEGQMGEDGNSIK Oxidation (M) 1392.6191 0.61910866 806;3082 P13591-1;A0A087WTF6;P13591;P13591-3;P13591-4;A0A087WV75;A0A087WWD4;A0A087WX77;A0A087WTE4;A0A087WWJ5;B4DSQ7;A0A087X1V2;A0A087WVU1;B7Z8D6;A0A087WZS4;H7BYX6 NCAM1 Neural cell adhesion molecule 1 no no 0 1 0 2 0 1 43.037 43.118 3 3.8903E-06 11301 20230619_1881_Aki_TMTPro18x_K_F2 125.84 102.48 44558 36233 43819 56949 47465 54078 59816 56202 64433 53523 61637 67067 58744 56593 57363 58050 74016 75228 41194 33335 44722 55729 49352 54918 59717 57232 65214 54660 63289 67098 60047 58788 59276 59273 70665 71265 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54172000 15645 806;3082 14825 29783 23874 23874 478 1 9606 Homo sapiens -0.061496133182117774 LEGTNVQEAQK Unmodified 1215.6095 0.60953025 4365 Q96I99;Q3ZCW5;Q9Y436;H0Y852 SUCLG2;DKFZp586M2023 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 4 0 1 42.243 42.286 3 1.5344E-05 10543 20230619_1883_Aki_TMTPro18x_K_F4 141.89 108.94 41814 30236 42458 44296 65569 74603 54857 56989 72184 44720 61594 68761 64394 57380 71851 45624 76206 59999 38641 27806 43441 43941 66036 72700 56451 59091 72039 46653 63888 68295 66012 58931 73014 46942 72759 56895 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104140000 15646 4365 14826 29784 23875 23875 1 9606 Homo sapiens 0.010349864585577961 LEGVEGVAHIIDPK Unmodified 1475.7984 0.79839365 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5 0.816 1 1 1 58.476 58.517 3 1.0388E-06 17291 20230619_1885_Aki_TMTPro18x_K_F5 124.42 96.12 194520 169670 190680 212420 173500 216540 229320 228830 226780 264470 242890 256080 270790 235670 251440 286570 263720 308270 179910 155660 193950 211070 183210 218880 227950 233870 232040 265010 249800 259620 274600 246500 256910 288260 252520 292400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 877270000 15647 3881 14827 29785;29786;29787 23876;23877;23878 23877 3 9606 Homo sapiens 0.07952639032032494 LEGVLVNHNEPR Unmodified 1375.7208 0.72081203 844 A0A8J9ASZ5;Q86TC9-2;Q86TC9;A0A087WX60;A0A8I5QL13;A0A804CFL5;A0A8I5KWT3 MYPN Myopalladin yes no 0 0 0 1 0 1 38.24 38.24 3 0.019613 9308 20230619_1880_Aki_TMTPro18x_K_F1 44.612 13.883 63696 48647 57373 60666 65147 89816 72917 80561 97456 75225 92107 90983 91324 85606 91295 80063 100740 105570 58825 44649 58974 60653 67461 88334 73829 82749 97577 76849 94716 91475 93292 88187 93292 82016 96331 99981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51692000 15648 844 14828 29788 23879 23879 1 9606 Homo sapiens 0.04798045886491309 LEHAFCTETRPYNQGAR Unmodified 2048.9487 0.94865649 4447 Q9BV20 MRI1 Methylthioribose-1-phosphate isomerase yes yes 0 0 1 7.5 0.5 1 1 40.011 40.038 3 6.1181E-10 9520 20230619_1888_Aki_TMTPro18x_K_F8 143.28 129.45 45433 23731 44274 49480 36801 38919 44156 45066 43309 50576 51326 53936 51962 48156 52610 54951 56092 62776 41907 21970 44985 47675 38991 40262 44102 45783 44521 50894 52343 54398 53069 50220 53693 55543 53681 59517 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79098000 15649 4447 14829 29789;29790 23880;23881 23881 2 9606 Homo sapiens -0.03385989038588377 LEHALEK Unmodified 838.45487 0.45486751 1543 P50851;P50851-2;A0A494BZW2;A0A494C1L5;E9PEM5;A0A494C0R9;Q59HC1 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes no 0 0 0 4 0 1 41.909 41.952 3 0.016595 10359 20230619_1883_Aki_TMTPro18x_K_F4 82.279 15.109 64239 25075 59148 67478 78255 80309 75367 76237 75166 65641 88568 88466 87033 76341 71699 57615 107920 92475 59167 23374 60842 64733 79641 80065 76162 77888 77071 67609 90160 88333 88187 78189 75083 60207 102800 87520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40624000 15650 1543 14830 29791 23882 23882 1 9606 Homo sapiens 0.029178268346640834 LEHEISHLKK Unmodified 1232.6877 0.68772099 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 8 0 1 41.777 41.774 5 1.944E-05 10215 20230619_1888_Aki_TMTPro18x_K_F8 143.96 119.87 50480 14468 45171 49395 68473 48758 56689 52788 51467 53566 66766 46340 45686 31991 55022 32530 32546 22906 46447 13602 46669 46937 68739 49447 57684 53681 53335 53845 66738 46915 47644 33521 54420 32233 31291 21894 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14290000 15651 3440 14831 29792 23883 23883 1 9606 Homo sapiens 0.08068463834456452 LEHEYIHNFK Unmodified 1328.6513 0.65133548 702 A0A024RC33;Q15555-4;Q15555-5;Q15555-3;Q15555;K7EL66;K7ERD8;Q15555-2;M0QX52;K7ENB3;B7Z867 MAPRE2 Microtubule-associated protein RP/EB family member 2 no no 0 0 0 6 0.816 1 1 1 43.31 43.395 4 0.057892 10687 20230619_1887_Aki_TMTPro18x_K_F7 50.108 36.971 41049 35017 43648 44111 43438 43916 50128 44190 70093 49404 48829 50704 60030 39278 45157 56680 52709 50544 37987 32129 44122 43804 45308 44443 50740 45289 69375 49733 51582 51033 60139 41857 46659 56300 50344 48079 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 281290000 15652 702 14832 29793;29794;29795 23884 23884 1 9606 Homo sapiens 0.00015586937752232188 LEHEYIQNFK Unmodified 1319.651 0.65100113 2536 Q15691;B4DM33;A2VCR0 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes no 0 0 0 7 0 1 48.87 48.957 3 4.2907E-05 13098 20230619_1887_Aki_TMTPro18x_K_F7 120.09 94.39 395250 218710 347130 376130 374440 365820 377460 355910 392500 485380 476590 431210 543060 402470 410380 559770 471330 475910 364370 201820 357120 366550 386560 370430 380990 367830 402930 481810 487500 439520 545400 424640 423840 554850 450400 452890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 554340000 15653 2536 14833 29796 23885 23885 1 9606 Homo sapiens 0.003961672179002562 LEHLFESR Unmodified 1029.5243 0.52434406 793 A0A068F7M9;Q9Y613;B4DVN5;J3KTH7 FHOD1 FH1/FH2 domain-containing protein 1 yes no 0 0 0 5.5 0.5 1 1 48.201 48.279 3 0.04686 13034 20230619_1885_Aki_TMTPro18x_K_F5 54.608 33.738 30978 31737 34699 35646 40653 43299 38557 39593 50539 40681 41087 42699 46300 39604 43726 45707 57417 50289 28718 29070 35032 35787 41695 43131 39367 40727 50419 41144 42842 43153 46991 41285 45270 46085 54754 47742 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44864000 15654 793 14834 29797;29798 23886;23887 23886 2 9606 Homo sapiens 0.010762857834379247 LEHLLQAK Unmodified 950.55492 0.5549159 2330 I3L2J8;B2RN10;Q9UPN4-3;Q9UPN4-2;Q9UPN4 CEP131;AZI1 Centrosomal protein of 131 kDa yes no 0 0 0 1 0 1 50.297 50.297 3 0.001706 14466 20230619_1880_Aki_TMTPro18x_K_F1 111.74 83.53 39395 28856 33352 37951 40684 46503 40167 41107 49929 41258 42606 51394 43645 41379 43934 40967 43990 49322 36358 26504 34522 37678 41708 46240 40826 42372 50005 42014 44171 51330 44555 42978 44658 41659 42125 46738 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68105000 15655 2330 14835 29799 23888 23888 1 9606 Homo sapiens 0.07766064168470166 LEHTAQTYSELQGER Unmodified 1760.8329 0.83294126 2891 E7EMW7;O95071-2;O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 0 0 0 4 0 1 42.139 42.182 3 1.208E-13 10486 20230619_1883_Aki_TMTPro18x_K_F4 163.62 141.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15656 2891 14836 29800 23889 23889 1 9606 Homo sapiens -0.01704189617839802 LEIAGTVVGHWAGSR Unmodified 1551.8158 0.81577505 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;A0A0C4DG79;A0A494C0Y9 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 0 0 3 0 1 56.669 56.706 3 0.00019127 17077 20230619_1882_Aki_TMTPro18x_K_F3 93.181 46.362 67911 55411 80213 77330 58900 67835 83865 82215 77737 88379 71447 67372 90697 74394 76008 95639 92480 97702 62888 50906 80133 76189 63485 69624 82954 83165 79383 88319 74428 69624 91261 77680 78565 95815 88361 92757 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87026000 15657 1839 14837 29801 23890 23890 1 9606 Homo sapiens 0.06193979357703938 LEICNLTPDTLTSDTYK Unmodified 1982.9507 0.95067313 4021 Q59EF6;B4E1R7;B2RCM3;P17655;B4DN77;P17655-2 CAPN2 Calpain-2 catalytic subunit yes no 0 0 0 6 0 1 62.144 62.195 3 7.5774E-07 19093 20230619_1886_Aki_TMTPro18x_K_F6 117.07 106.43 113640 85128 100600 118920 85847 120860 123640 118760 130220 135720 133020 135900 144110 128380 133100 156390 156920 169990 104930 78233 103210 117290 91574 121920 122670 121950 132430 136260 136870 137720 146270 134160 136980 157390 150000 161270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110070000 15658 4021 14838 29802 23891 23891 1 9606 Homo sapiens -0.0014841786403394508 LEIEPEWAYGK Unmodified 1333.6554 0.65541781 3774 Q00688;Q53GD8 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 5 0 1 61.535 61.583 2 0.0016861 18583 20230619_1885_Aki_TMTPro18x_K_F5 120.12 97.289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15659 3774 14839 29803 23892 23892 1 9606 Homo sapiens 0.0019363164078640693 LEILQQQLQVANEAR Unmodified 1751.953 0.95299681 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 7.5 0.5 1 1 61.955 61.988 3 6.2422E-14 18614 20230619_1888_Aki_TMTPro18x_K_F8 173.33 141.17 155970 118760 148030 161240 131950 171120 142040 126630 141490 133570 158860 126630 170620 137560 148870 141830 126950 131280 144100 109100 150880 159390 138800 171180 142680 132740 144840 134510 162470 129380 172610 141800 150520 141920 121710 124780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 558260000 15660 349;3906 14840 29804;29805 23893 23893 1 9606 Homo sapiens 0.107098434466252 LELCDER Unmodified 933.42258 0.4225811 3403 Q567R0;P07919 UQCRH Cytochrome b-c1 complex subunit 6, mitochondrial yes no 0 0 0 1.5 0.5 1 1 42.973 43.013 2 0.0030106 11398 20230619_1880_Aki_TMTPro18x_K_F1 157.9 56.688 423150 346410 382890 458960 576410 590740 559500 533000 699640 463710 553030 586170 606630 533240 574390 613440 649880 607010 390970 318050 395700 455760 582870 586030 569040 546720 698230 476640 576930 587960 616170 555830 588990 614750 620770 576770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 728630000 15661 3403 14841 29806;29807 23894;23895 23894 2 9606 Homo sapiens -0.04679328630629698 LELEAAQK Unmodified 900.49165 0.49164694 3904 Q14974;B2RBR9;J3QR48 KPNB1 Importin subunit beta-1 yes no 0 0 0 4 0 1 48.381 48.421 3 0.020217 13272 20230619_1883_Aki_TMTPro18x_K_F4 60.91 27.36 46318 34756 44805 58133 53266 52920 51196 51428 72474 57412 63036 59152 66896 56765 55627 60617 65537 65873 42795 32013 45839 56664 54598 53861 52388 52824 72211 57799 65243 59905 67625 58849 57337 61138 62612 62510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54456000 15662 3904 14842 29808 23896 23896 1 9606 Homo sapiens 0.03742078660570769 LELEQLR Unmodified 899.50763 0.50763136 4773 yes no 0 0 0 4 0.707 1 2 1 49.104 49.161 2 0.0090158 13591 20230619_1883_Aki_TMTPro18x_K_F4 119.89 5.285 + 2123100 1945300 1907400 2062500 1776800 2018500 1901100 1850900 2352700 2568600 2556800 2538100 2492300 2107100 2256900 2779800 2688300 2903200 1963000 1781500 1954300 2073500 1861000 2041700 1924300 1922200 2380700 2556300 2610400 2563400 2534800 2223800 2325900 2787800 2569400 2755400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4332700000 15663 4773 14843 29809;29810;29811;29812 23897 23897 1 9606 Homo sapiens 0.05385784897475787 LELEQTYQAK Unmodified 1221.6241 0.62411768 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 0 0 4.5 0.5 1 1 51.077 51.131 2 3.2076E-26 14242 20230619_1885_Aki_TMTPro18x_K_F5 275.28 214.85 173000 133070 141920 175680 125890 151860 183580 174610 206470 220720 238990 251600 252670 211140 193580 274090 270710 270680 159670 122210 146760 173580 133770 155850 182440 178130 210350 221480 244280 252670 254670 222450 202580 273980 258260 257130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104820000 15664 1473 14844 29813;29814 23898;23899 23899 2 9606 Homo sapiens 0.022170586066977194 LELFGCDMY Oxidation (M) 1162.4675 0.46748238 2794 CON__Q28107 yes yes 0 1 0 4 0.816 1 1 1 64.501 64.53 2 0.0037248 20221 20230619_1883_Aki_TMTPro18x_K_F4 94.407 86.809 + 36983 37950 41793 43984 49866 55962 49032 44328 56265 51315 62351 76667 55554 53007 63820 59849 58790 74888 34288 34771 42194 44077 51133 55420 49705 46303 57127 52263 63506 75820 57336 55794 64459 60889 56410 70910 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 57390000 15665 2794 14845 29815;29816;29817 23900 23900 1668 1 9606 Homo sapiens -0.10725265879636936 LELFGCDMY Unmodified 1146.4726 0.47256776 2794 CON__Q28107 yes yes 0 0 0 4 0.816 1 1 1 65.91 65.94 2 0.002246 20791 20230619_1883_Aki_TMTPro18x_K_F4 108.24 108.24 + 8853.4 9855.2 9870.8 10383 11758 13888 10478 12528 14304 12557 15807 19913 16626 14814 18420 13267 15079 20929 8212.7 9019.6 9974.4 10492 12041 13747 10765 12888 14409 12913 16216 19689 17026 15371 18488 13803 14500 19776 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37651000 15666 2794 14845 29818;29819;29820 23901;23902 23901 2 9606 Homo sapiens -0.09480962017005368 LELFLPEEYPMAAPK Oxidation (M) 1762.8852 0.88515975 3689 V9HW41;P61088;F8VSD4;F8VV71;F8VZ29 HEL-S-71;UBE2N Ubiquitin-conjugating enzyme E2 N yes no 0 1 0 6.67 0.471 1 2 63.598 63.636 3;4 6.7947E-05 19480 20230619_1887_Aki_TMTPro18x_K_F7 95.631 78.887 327440 259040 310880 335510 291560 307080 294370 265640 321160 375150 408090 388560 411970 330190 380380 453640 369260 445700 302580 237810 316960 332110 304390 311820 297640 277400 329370 373620 414650 392050 418610 349140 387190 453190 353940 423130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 809550000 15667 3689 14846 29821;29822;29823 23903;23904 23904 2375 2 9606 Homo sapiens 0.034232574715815645 LELFLPEEYPMAAPK Unmodified 1746.8902 0.89024513 3689 V9HW41;P61088;F8VSD4;F8VV71;F8VZ29 HEL-S-71;UBE2N Ubiquitin-conjugating enzyme E2 N yes no 0 0 0 6.8 0.748 2 2 1 64.538 64.569 3;4 4.8082E-05 19878 20230619_1887_Aki_TMTPro18x_K_F7 96.591 78.453 968790 837140 864140 909350 559080 905360 820140 758950 795090 1153600 1112000 1012200 1223200 987160 1094200 1107200 1096800 1223400 895320 766980 882490 912610 614220 912160 811670 796340 825490 1140000 1130300 1033100 1238000 1026200 1115200 1117200 1050200 1160300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1450800000 15668 3689 14846 29824;29825;29826;29827;29828 23905;23906;23907;23908 23907 4 9606 Homo sapiens 0.04667561334213133 LELFTNR Unmodified 891.48142 0.48141661 3977 Q68DW7;Q4LE48;Q8WVM7-2;Q8WVM7;H7C595 DKFZp781D1416;STAG1 variant protein;STAG1 Cohesin subunit SA-1 yes no 0 0 0 1 0 1 54.122 54.122 2 0.022167 16050 20230619_1880_Aki_TMTPro18x_K_F1 91.9 52.237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15669 3977 14847 29829 23909 23909 1 9606 Homo sapiens 0.031335157259945845 LELNSGR Unmodified 787.41882 0.41881635 902 A0A090N7X1;A0A090N7Y2;Q9UG63;Q9UG63-2;C9JHK9;C9JZV3 ABCF2 ATP-binding cassette sub-family F member 2 yes no 0 0 0 4.5 0.5 1 1 39.399 39.466 2 0.040952 9306 20230619_1885_Aki_TMTPro18x_K_F5 90.308 46.494 123570 79833 136590 141750 159760 192610 153120 159020 204000 125150 147610 137580 146070 121690 137990 101540 225490 138670 114220 73641 138080 138600 164110 189970 156330 163840 202430 128860 153960 138550 148860 125060 145030 104580 214300 131640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 146860000 15670 902 14848 29830;29831 23910 23910 1 9606 Homo sapiens 0.016603696578158633 LELNYCVPMGVQTGDR Unmodified 1850.8655 0.86550371 4742 Q9Y512;B4DN54;B3KUE6 SAMM50 Sorting and assembly machinery component 50 homolog yes no 0 0 0 7 0 1 59.626 59.672 2 0.00051586 17695 20230619_1887_Aki_TMTPro18x_K_F7 106.17 83.641 13786 10428 11487 13816 12675 15703 12634 13503 12386 14128 14747 13447 16671 14666 13610 18525 14582 18751 12724 9577.8 11893 13692 13088 15679 12741 13961 12739 14225 15094 13740 16810 15293 13976 18550 13972 17792 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11797000 15671 4742 14849 29832 23911 23911 1 9606 Homo sapiens -0.025894418108691752 LELQFPR Unmodified 901.50215 0.50215205 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 7.5 0.5 1 1 55.211 55.278 2 0.022924 15913 20230619_1887_Aki_TMTPro18x_K_F7 91.065 33.962 248560 220750 247720 247030 227160 297460 358690 333180 366480 371460 307470 289870 426890 302310 345390 438150 315990 330610 229950 202290 251580 248140 241360 297690 354090 338820 370790 370870 323370 298640 427580 318820 351550 431830 302720 315100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 409440000 15672 2830 14850 29833;29834 23912;23913 23912 2 9606 Homo sapiens 0.04746106105665149 LELQGPR Unmodified 811.4552 0.45520186 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 0 6 1.41 1 1 1 1 1 42.748 42.807 2 0.0014039 10614 20230619_1885_Aki_TMTPro18x_K_F5 168.74 103.94 752810 559650 618890 674510 775060 832730 817980 794780 943350 704070 812140 786980 826460 668500 768670 880660 918670 747850 694680 513540 642560 673860 794120 829220 825840 812140 947870 719380 839910 791750 840300 704550 791480 873890 876350 712350 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6966999999.999999 15673 1658 14851 29835;29836;29837;29838;29839 23914;23915;23916 23915 3 9606 Homo sapiens 0.04193246554518737 LELSDNIISGGLEVLAEK Unmodified 1899.0201 0.020073325 3989 Q53F20;Q9BTT0;Q5TB19;B4E0D5;E9PLC4;Q9BTT0-3 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes no 0 0 0 5 0 1 65.792 65.836 3 1.5716E-06 20513 20230619_1885_Aki_TMTPro18x_K_F5 104.92 86.089 18041 9390.3 11375 17535 12061 15068 12393 14674 21204 18404 18539 25643 25612 29722 14683 32872 34220 40734 16593 8678.4 12156 16984 12534 15399 12751 15123 20997 18639 19487 25842 25477 30664 16303 33362 32598 38582 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35514000 15674 3989 14852 29840 23917 23917 1 9606 Homo sapiens 0.10652409147064645 LELSENR Unmodified 859.43995 0.43994572 3990 Q53F35;Q92688-2;Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes no 0 0 0 2.5 0.5 1 1 40.467 40.532 2 0.090887 9873 20230619_1882_Aki_TMTPro18x_K_F3 71.296 23.38 50550 39059 47613 54604 60389 66196 58820 56500 79592 50386 63607 60478 56277 52910 64800 54366 66980 63062 46703 35891 48847 53988 61712 65819 60012 58241 79153 51629 65685 60703 58119 54888 65802 55136 64038 59819 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357180000 15675 3990 14853 29841;29842 23918 23918 1 9606 Homo sapiens 0.004603349666695067 LELSGCEQGLHEIK Unmodified 1611.7927 0.79265635 2462 B4DEE8;P16455;Q6LDD1;A0A059PXT9 MGMT Methylated-DNA--protein-cysteine methyltransferase yes no 0 0 0 3.5 0.5 1 1 49.933 49.988 3 5.9235E-09 13990 20230619_1883_Aki_TMTPro18x_K_F4 160.81 130.26 147310 125260 142850 159920 148730 168170 176200 174570 173060 212960 204540 241970 216630 186810 210190 211480 231860 261130 136210 114950 145700 158750 154750 169560 176000 178930 177940 213910 209210 242240 220420 195880 215060 214890 221840 247390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116160000 15676 2462 14854 29843;29844 23919 23919 1 9606 Homo sapiens 0.011231724580738955 LELTNETSENPTQSPWCSQYR Unmodified 2539.1285 0.12853093 3282 O60566-3;O60566;O60566-2 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes no 0 0 0 5 0 1 56.799 56.861 3 7.4479E-08 16637 20230619_1885_Aki_TMTPro18x_K_F5 99.059 95.772 7471.9 6927.1 8433.1 9188.5 8758.6 8856.9 10806 8033.1 8896.4 10580 10291 8897.6 14257 8897.2 10156 13341 12123 12270 6922.2 6357.4 8497.2 9087 9109.7 8965 10712 8341.3 9239.2 10504 10656 9120.6 14209 9428.8 10525 13264 11581 11665 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12216000 15677 3282 14855 29845 23920 23920 1 9606 Homo sapiens -0.07946819402786787 LELTTYLFGQDP Unmodified 1395.6922 0.69219725 1911 A2A3U5;Q99720-3;Q99720;Q5T1J1;Q99720-5;Q99720-2 hCG_20471;SIGMAR1 Sigma non-opioid intracellular receptor 1 yes no 0 0 0 6 0.816 1 1 1 66.755 66.798 2;3 0.0045529 21067 20230619_1886_Aki_TMTPro18x_K_F6 99.653 84.387 9710.8 5009.1 7891 8696.3 7271.1 10438 11720 9218.4 17531 7726.4 8635.9 8315.5 10288 7720.5 6970 12457 12719 12107 8944.7 4624.7 8169.1 8495 7754.4 10381 11720 9469.8 17138 7931.2 9343.4 8409.9 10295 8238.4 7493.2 12403 12110 11506 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11520000 15678 1911 14856 29846;29847;29848 23921;23922;23923 23922 3 9606 Homo sapiens 0.010178834667158299 LEMDGHLNR Oxidation (M) 1099.508 0.50804206 83 G3V1E2;A0A5F9UJX7;A0A024R0A9;A0A5F9UP49;A0A024R084;Q9BRK5-4;Q9BRK5-3;Q9BRK5-6;Q9BRK5 SDF4 45 kDa calcium-binding protein yes no 0 1 0 2.5 0.5 1 1 32.646 32.712 3 4.1166E-05 6757 20230619_1881_Aki_TMTPro18x_K_F2 144.66 111.28 25005 19293 20560 23837 27605 29117 29000 34135 34602 25879 32425 24362 31354 25566 26758 27063 32574 20957 23079 17705 21383 23773 28160 29155 29334 34278 34809 26561 33263 24885 31812 26408 27607 26838 31030 20012 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67572000 15679 83 14857 29849;29850 23924 23924 39 1 9606 Homo sapiens -0.0377316344497558 LEMDGHLNR Unmodified 1083.5131 0.51312744 83 G3V1E2;A0A5F9UJX7;A0A024R0A9;A0A5F9UP49;A0A024R084;Q9BRK5-4;Q9BRK5-3;Q9BRK5-6;Q9BRK5 SDF4 45 kDa calcium-binding protein yes no 0 0 0 3 0 1 38.793 38.847 3 1.7518E-07 9103 20230619_1882_Aki_TMTPro18x_K_F3 152.79 127.87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15680 83 14857 29851 23925 23925 1 9606 Homo sapiens -0.02528859582344012 LEMEMEAAR 2 Oxidation (M) 1110.4685 0.46854502 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;H7C367;C9JYS8 NONO Non-POU domain-containing octamer-binding protein yes no 0 2 0 1.5 0.5 1 1 34.736 34.765 2 0.052299 7852 20230619_1880_Aki_TMTPro18x_K_F1 62.969 36.512 60508 32784 36155 59615 64572 69814 52214 62952 80938 59507 77596 80698 71081 63009 59488 88267 82568 76713 55646 30279 39315 58044 64605 69619 54243 64676 80611 61009 79475 80418 72248 66859 62130 87562 78737 73007 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121820000 15681 1112 14858 29852;29853 23926 23926 693;694 1 9606 Homo sapiens -0.0822705151072114 LEMEMEAAR Oxidation (M) 1094.4736 0.47363039 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;H7C367;C9JYS8 NONO Non-POU domain-containing octamer-binding protein yes no 0 1 0 1.5 0.5 1 1 41.169 41.207 2 0.0069485 10587 20230619_1880_Aki_TMTPro18x_K_F1 86.744 76.606 104510 70424 75725 92816 99608 126240 93459 105570 131590 104440 125440 128580 130680 112910 94721 136200 143530 129040 96312 64709 79795 92278 101690 124580 95774 109200 131560 106420 129170 128960 131570 118170 99868 135980 136760 122690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 381120000 15682 1112 14858 29854;29855 23927 23927 693;694 1 9606 Homo sapiens -0.06982747648112309 LEMEMEAAR Unmodified 1078.4787 0.47871577 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;H7C367;C9JYS8 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 1.5 0.5 1 1 48.305 48.341 2 8.1627E-05 13650 20230619_1881_Aki_TMTPro18x_K_F2 158.61 122.4 1050200 661730 777290 939580 800460 1161500 938180 1023800 1295000 1213600 1089400 1166900 1350000 1108200 791430 1476500 1451100 1267100 967600 608730 813970 928370 836900 1153500 948940 1060100 1291300 1215400 1138500 1185000 1343600 1164500 854710 1464000 1380800 1206400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1537599999.9999998 15683 1112 14858 29856;29857 23928;23929 23929 2 9606 Homo sapiens -0.0573844378548074 LEMYNILK Unmodified 1022.5471 0.54705333 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;D6R9F8;D6RDJ6;D6RCA5 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 1.5 0.5 1 1 61.77 61.775 2 0.0021653 19393 20230619_1881_Aki_TMTPro18x_K_F2 131.06 73.959 218680 214650 224050 205120 151500 186320 231470 195760 225760 230960 232110 221430 191170 166740 238440 269370 205370 245360 202500 196370 225980 207930 165300 190180 228600 200430 230510 231180 236100 223490 198660 179190 240010 267580 197090 233150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253750000 15684 2326 14859 29858;29859 23930 23930 1 9606 Homo sapiens 0.036681688566886805 LEMYVLNPVK Oxidation (M) 1220.6475 0.64749566 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 1 0 1 0 1 58.807 58.807 3 0.00080241 18011 20230619_1880_Aki_TMTPro18x_K_F1 93.325 66.652 92951 68928 68751 81080 95528 110780 90356 83941 116880 19405 18807 16610 18274 15125 46153 24683 26121 16218 85714 63235 72336 81243 97120 109130 92111 85914 113350 23200 23936 17023 20029 16146 45213 24247 25118 15530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48278000 15685 630 14860 29860 23931 23931 369 1 9606 Homo sapiens 0.04599781119668478 LEMYVLNPVK Unmodified 1204.6526 0.65258104 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 2 0 1 62.02 62.03 2 0.00027922 19521 20230619_1881_Aki_TMTPro18x_K_F2 152.34 110.84 151840 130080 135500 143500 129250 195410 137110 147850 201020 40026 35200 36774 42423 32848 90665 49606 49511 40818 140320 119200 139010 144490 135550 192430 139700 151440 194030 46485 44348 37467 45395 34904 88841 49219 47710 38894 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161790000 15686 630 14860 29861 23932 23932 1 9606 Homo sapiens 0.05844084982277309 LENGELEHIRPK Unmodified 1433.7627 0.76267685 99 A0A024R0L6;Q15102;M0R389;M0R1K3;M0QZT2;M0QXS6;M0R323 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma yes no 0 0 1 5 0.816 1 1 1 42.63 42.703 4 6.1271E-08 10686 20230619_1885_Aki_TMTPro18x_K_F5 169.09 133.57 238030 191790 234330 240790 256640 306750 278760 275050 314080 317130 326640 332360 356730 291840 320680 351930 371540 364330 220050 176000 238770 240000 265610 304380 280890 284260 318570 318730 335900 335350 361380 305630 329690 353300 354940 345940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 337000000 15687 99 14861 29862;29863;29864 23933;23934;23935 23933 3 9606 Homo sapiens 0.06314601575013512 LENITDDHK Unmodified 1083.5197 0.51965261 1715 A0A7P0TBP9;Q13325-2;Q13325 IFIT5 Interferon-induced protein with tetratricopeptide repeats 5 yes no 0 0 0 3.5 0.5 1 1 42.734 42.789 3 0.037581 10781 20230619_1882_Aki_TMTPro18x_K_F3 53.569 31.039 124520 82147 114670 116660 124600 137160 130200 134520 163920 147580 154480 154520 169150 132910 141870 150450 181540 163860 114930 75550 117460 115230 128860 137040 132010 137920 164690 148690 159550 155810 170840 138820 146960 151640 173190 155560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129510000 15688 1715 14862 29865;29866 23936 23936 1 9606 Homo sapiens -0.018766431499898317 LENLMLDK Unmodified 974.51067 0.51066783 1590;1735 P31749;A0A804HJM6;B0LPE5;B3KVH4;P31749-2;G3V2I6;J3KTC6;A0A0U4CQG9;M0R0P9;B4DG79;J3QKW1;B3KP61;A0A087WY56;P31751;A0A7P0T8T9;A0A5K1VW74;Q9Y243;Q56A86;Q9Y243-2;A0A5F9ZGY0;A0A5F9ZHU3 AKT1;AKT2;AKT3 RAC-alpha serine/threonine-protein kinase;RAC-beta serine/threonine-protein kinase;RAC-gamma serine/threonine-protein kinase no no 0 0 0 6 0 1 60.016 60.077 3 0.037621 18161 20230619_1886_Aki_TMTPro18x_K_F6 54.416 4.3762 59823 58021 61187 56373 43664 50982 52977 53254 63662 76078 70101 82011 81189 67642 70943 99065 94252 94546 55392 53088 61744 57059 47024 52058 53253 54871 64585 75815 72183 82487 82044 71906 73762 98698 89956 89847 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85463000 15689 1735;1590 14863 29867 23937 23937 1 9606 Homo sapiens 0.02239291959961065 LENMNAQADR Unmodified 1160.5244 0.52442041 4192 Q86VY4 TSPYL5 Testis-specific Y-encoded-like protein 5 yes yes 0 0 0 3 0 1 38.778 38.832 2 1.4602E-07 9093 20230619_1882_Aki_TMTPro18x_K_F3 192.21 154.48 44009 25567 47675 40434 46546 54445 50526 55025 64667 50623 51836 50411 64748 52857 41433 38440 61583 55000 40648 23559 48069 39799 48579 53969 51163 56020 64541 51426 54311 51241 64567 53726 43628 39809 58682 52088 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26687000 15690 4192 14864 29868 23938 23938 1 9606 Homo sapiens -0.04942082278876114 LENNENKPVTNSR Unmodified 1513.7485 0.74848335 2661 B5BU99;Q9Y5A9;Q9Y5A9-2 YTHDF2 YTH domain-containing family protein 2 yes no 0 0 1 5.5 0.5 1 1 35.256 35.327 3 9.8519E-11 7662 20230619_1885_Aki_TMTPro18x_K_F5 174.37 154.79 80609 41955 111820 111980 164520 197150 118210 154900 133660 93788 162700 184470 139570 134950 157550 60406 165460 157940 74606 39025 111800 108270 165540 191690 122490 159400 136250 100860 164740 181290 144120 136900 159770 67708 158180 149010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 89382000 15691 2661 14865 29869;29870 23939;23940 23939 2 9606 Homo sapiens 0.012159043560814098 LENYPIPEPGPNEVLLR Unmodified 1949.0258 0.025827405 3775 V9HW89;Q00796;A0A6I8PIS1;H0YKB3;Q00796-2 HEL-S-95n;SORD Sorbitol dehydrogenase yes no 0 0 0 5.5 0.5 2 2 61.795 61.846 2;3 1.0665E-17 18938 20230619_1886_Aki_TMTPro18x_K_F6 199.31 171.11 93675 63007 87128 90079 92518 74250 75979 86405 120460 94204 137930 107390 128530 94462 112000 103870 96606 163230 86472 57947 89089 88540 95119 76624 79018 87649 120750 95237 140020 108120 130530 98541 113310 107550 93042 154170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 865500000 15692 3775 14866 29871;29872;29873;29874 23941;23942 23942 2 9606 Homo sapiens 0.089275524493587 LEPHEGLLLR Unmodified 1175.6663 0.66625727 1704 P08195-4;P08195-5;P08195;P08195-3;A0A7P0Z4P5;A0A7P0TAN7;A0A7P0Z4A0;A0A7P0T9F7;F5GZS6;P08195-2;A0A7P0TBF8;B4E2Z3;F5H056;F5GZI0 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 0 5 0.816 1 1 1 46.327 46.394 3 1.4615E-07 12309 20230619_1886_Aki_TMTPro18x_K_F6 160.53 115.78 122860 93973 98838 113360 92041 129410 108060 111200 154440 109460 134270 178850 163790 135780 119160 178460 185020 235180 113370 86222 102410 113080 96944 129160 109460 114860 153740 112920 140250 176920 164170 143790 125930 181590 176730 222590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 363330000 15693 1704 14867 29875;29876;29877 23943;23944 23944 2 9606 Homo sapiens 0.08545078805764206 LEPHKPQQIPIDSTVSFGASTR Unmodified 2407.2496 0.24957276 3825 Q561W4;Q12972;B4E389 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay yes no 0 0 1 1 0 1 50.017 50.017 4 3.9281E-08 14357 20230619_1880_Aki_TMTPro18x_K_F1 112.23 97.753 22936 16773 21001 21187 23623 25397 23000 24198 35007 20392 24412 23879 25084 16196 22676 21242 25336 23400 21179 15399 21533 21091 24336 25334 23592 24699 34509 20945 25566 23829 25437 17251 23238 21390 24202 22210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66100000 15694 3825 14868 29878 23945 23945 1 9606 Homo sapiens 0.1022379609280506 LEPKPQPPVAEATPR Unmodified 1628.8886 0.88860564 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;Q1WWK5;K7ER14;K7EJ51 SEPT9 Septin-9 yes no 0 0 1 6.5 0.5 1 1 43.548 43.634 3 7.1053E-06 10641 20230619_1887_Aki_TMTPro18x_K_F7 117.2 74.111 155230 134310 163400 161900 145520 168220 181610 174800 184730 213910 219080 201870 225770 188890 208850 236240 226020 216050 143650 123170 165050 161380 153530 169780 181170 179170 189500 213670 223350 205130 229380 197780 213770 235440 216020 205450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 591900000 15695 541 14869 29879;29880 23946;23947 23947 2 9606 Homo sapiens 0.09931688360484259 LEPNLQAQMYR Oxidation (M) 1377.6711 0.67108465 1042 O94973-2;O94973;B7Z5S9;A0A0G2JS82;B7Z1Q4;A0A8I5KY83 AP2A2 AP-2 complex subunit alpha-2 yes no 0 1 0 6 0 1 45.856 45.942 2 0.062236 12097 20230619_1886_Aki_TMTPro18x_K_F6 58.699 33.313 63594 49851 57618 68064 57587 52224 63801 62235 70400 69140 81980 78245 76243 69147 82125 77211 90049 90827 58743 45794 59074 67024 59910 54268 64192 63113 71786 69772 83310 78734 78308 72053 83816 78240 86087 86121 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84030000 15696 1042 14870 29881 23948 23948 607 1 9606 Homo sapiens -0.002644051138076975 LEPNLQAQMYR Unmodified 1361.6762 0.67617003 1042 O94973-2;O94973;B7Z5S9;A0A0G2JS82;B7Z1Q4;A0A8I5KY83 AP2A2 AP-2 complex subunit alpha-2 yes no 0 0 0 7.5 0.5 1 1 50.678 50.756 2 1.288E-06 13851 20230619_1888_Aki_TMTPro18x_K_F8 167.12 120.75 49981 41203 43609 49318 35101 38665 45435 46830 49446 51883 51948 45404 49669 44609 49155 54103 50708 49162 46170 37791 44734 49014 37425 40106 45359 47422 50254 51955 53044 46390 50755 46533 50107 53930 48491 46752 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128010000 15697 1042 14870 29882;29883 23949 23949 1 9606 Homo sapiens 0.009798987488238708 LEPQIASASEYAHR Unmodified 1570.774 0.77396981 1189 A0A140VJN8;O60664-4;O60664-3;O60664;K7EL96;K7ER39 PLIN3 Perilipin-3 yes no 0 0 0 5 0 1 44.995 45.072 3 5.2478E-06 11670 20230619_1885_Aki_TMTPro18x_K_F5 89.136 75.708 64335 50936 47664 75915 90892 59009 58923 50588 128190 49891 56071 55314 66146 51367 52437 71848 51779 55357 59350 46836 50559 74308 90000 60861 63288 52336 123570 50831 61314 55833 66537 54189 53638 70894 49573 52740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85008000 15698 1189 14871 29884 23950 23950 1 9606 Homo sapiens 0.0114137887853758 LEPQIAVANTYACK Unmodified 1576.7919 0.79192807 4102 Q6FHZ7;Q99541;B4DJK9;B4DNH6;Q5SYF3;Q5SYF5;Q5SYF4 ADFP;PLIN2 Perilipin;Perilipin-2 yes no 0 0 0 8 0 1 55.275 55.338 3 4.2484E-05 15863 20230619_1888_Aki_TMTPro18x_K_F8 103.11 81.858 82708 59057 88885 66563 52409 78702 75325 68633 83314 104610 75443 61959 100420 84065 59894 102870 99214 71444 76464 54166 89113 66831 58091 78404 74914 71752 84271 102510 78731 65619 99809 86984 64012 101200 94355 68293 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 244160000 15699 4102 14872 29885 23951 23951 1 9606 Homo sapiens 0.026603778090247943 LEPSTSTDQPVTPEPTSQATR Unmodified 2241.0761 0.076084654 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;A0A1U9XBD9;A0A1U9XBC3;Q14676-3;B4DYH4 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 0 3 0 1 44.431 44.504 3 8.2807E-13 11609 20230619_1882_Aki_TMTPro18x_K_F3 144.74 128.21 26606 19293 16885 22943 21702 20865 23955 27443 23836 30808 24355 26346 34452 29322 23912 33043 35497 28481 24510 17703 18067 22847 22217 21419 24024 27656 24367 30801 25413 27045 34353 30343 25186 32867 33803 27126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79885000 15700 1308 14873 29886 23952 23952 1 9606 Homo sapiens 0.005189655259073334 LEQAAIVK Unmodified 870.51747 0.51746776 3853 Q53GX4;Q2TA84;Q13451;B7Z8G2;B7Z7Z8;Q6ZR21 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes no 0 0 0 7 0 1 48.432 48.519 2 0.0067255 12913 20230619_1887_Aki_TMTPro18x_K_F7 109.71 58.748 295270 240420 247190 255430 246840 300830 256920 300400 375830 333970 351600 352440 398500 324410 280720 411400 447660 389580 272660 220270 255150 257460 257280 300760 262260 307640 375120 336390 363740 356150 399720 340190 297430 410410 426300 370470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116310000 15701 3853 14874 29887 23953 23953 1 9606 Homo sapiens 0.07702972902859528 LEQCNTELK Unmodified 1133.5387 0.53867349 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 4 0 1 44.488 44.532 2 0.0046563 11510 20230619_1883_Aki_TMTPro18x_K_F4 99.568 57.589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15702 4191 14875 29888 23954 23954 1 9606 Homo sapiens -0.022754298506242776 LEQDEYALR Unmodified 1135.551 0.55095274 3658 P55084-2;P55084;B4DY96;F5GZQ3;B4DDC9;D6W539 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 1.5 0.5 1 1 46.42 46.459 2 7.1656E-12 12774 20230619_1881_Aki_TMTPro18x_K_F2 226.47 176.34 585380 508160 561270 609870 767820 817570 846210 831040 890020 823320 914930 966530 956450 841080 856250 1015900 1027100 1037300 541300 466000 575730 610350 782950 811310 849720 847630 905050 836870 939740 970660 970430 880770 882760 1018800 981110 984960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1192000000 15703 3658 14876 29889;29890 23955;23956 23956 2 9606 Homo sapiens -0.011400701159345772 LEQDQTSAQLQVQK Unmodified 1614.8213 0.82131394 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A0U1RQJ2 DST Dystonin yes no 0 0 0 5 0 1 47.725 47.801 3 5.7786E-06 12799 20230619_1885_Aki_TMTPro18x_K_F5 119.32 66.064 28069 21507 23557 30947 30810 34653 30893 27145 35137 35355 36484 33027 38768 30227 31668 41647 40711 38060 25910 19770 24461 30498 31451 34580 31262 28484 35622 35233 37438 33563 39147 31887 32880 41436 38846 36197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73324000 15704 1693 14877 29891 23957 23957 1 9606 Homo sapiens 0.03849613358829629 LEQEEPLTDAER Unmodified 1428.6733 0.67325272 749 A0A024RD56;Q5JTD0-2;Q5JTD0;A0A075B6G8;E2QRK7;Q5JTD0-3 TJAP1 Tight junction-associated protein 1 yes no 0 0 0 1 0 1 45.412 45.412 2 6.9255E-10 12466 20230619_1880_Aki_TMTPro18x_K_F1 190.36 140.32 28108 23152 27940 27154 27317 32854 26862 25715 31680 35609 39864 34974 37981 31855 32556 41673 37317 37572 25991 21230 28382 27171 28440 32626 27276 27030 32341 35442 40391 35455 38561 33479 33516 41464 35660 35729 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31153000 15705 749 14878 29892 23958 23958 1 9606 Homo sapiens -0.023936978949905097 LEQEQLER Unmodified 1043.5247 0.52473799 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A8Q3WLE0;A0A075B6E5;A0A0U1RQP7 ENAH Protein enabled homolog yes no 0 0 0 2 0 1 39.493 39.563 2 0.0046503 9618 20230619_1881_Aki_TMTPro18x_K_F2 128 56.653 88027 61330 79141 88142 98364 99623 92471 92171 121870 94096 114750 111190 120780 90361 97824 102330 120430 117230 81252 56399 81462 86923 100490 99694 94477 94742 122110 95572 118270 111420 121920 94601 101140 103460 114990 111200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120030000 15706 918 14879 29893 23959 23959 1 9606 Homo sapiens 0.004716607126283634 LEQGGTADGLR Unmodified 1115.5571 0.55710075 3252 O43290;B4DDH9 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 0 2.5 0.5 1 1 39.78 39.843 2 6.350599999999999E-23 9533 20230619_1882_Aki_TMTPro18x_K_F3 252.68 196.56 178130 119420 143640 167360 197600 205440 171990 174020 258680 191370 219680 212060 210550 182990 185150 190120 226680 219400 164270 109800 149710 165480 200460 204120 177520 180410 256850 193300 226710 213350 214050 190110 191030 192580 216430 208110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 187840000 15707 3252 14880 29894;29895 23960;23961 23961 2 9606 Homo sapiens 0.003944481156167967 LEQGQAIDDLMPAQK Oxidation (M) 1671.8138 0.81378572 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;H0YJG0 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 1 0 3.4 0.8 1 1 3 52.131 52.166 2;3 9.2322E-11 15133 20230619_1882_Aki_TMTPro18x_K_F3 155.09 139.2 300580 264790 272730 337960 272420 258360 278200 298630 299810 393230 426120 414190 381810 365470 366440 431500 431730 436370 277860 242950 279670 334210 282880 268380 281090 304920 309560 392730 429220 417910 390630 381910 376870 432660 412480 414390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1813099999.9999998 15708 3441 14881 29896;29897;29898;29899;29900 23962;23963;23964 23962 2074 3 9606 Homo sapiens 0.004751377668981149 LEQGQAIDDLMPAQK Unmodified 1655.8189 0.8188711 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;H0YJG0 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 0 4 0.816 1 1 1 57.985 58.015 3 1.2098E-14 17406 20230619_1883_Aki_TMTPro18x_K_F4 190.24 176.33 229380 187070 209050 215620 161610 203630 208570 204380 248890 270310 261900 259780 305050 256460 277370 308990 295740 295760 211950 171520 213390 215330 173180 206840 208910 210550 251940 269340 269980 264130 308630 267450 283720 308850 282780 281050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4296600000 15709 3441 14881 29901;29902;29903 23965;23966;23967 23966 3 9606 Homo sapiens 0.017194416295296833 LEQIAAEQK Unmodified 1028.5502 0.55022446 2053 Q5QPL9;A8K4T9;Q53GL6;Q9UKM9-2;Q9UKM9;Q5QPM0 RALY RNA-binding protein Raly yes no 0 0 0 4.5 0.5 1 1 48.404 48.462 3 0.00085965 13259 20230619_1883_Aki_TMTPro18x_K_F4 100.79 62.484 143490 96235 135390 143180 154210 176170 151760 157310 208870 142500 172920 162930 180470 143040 148260 121710 171940 169600 132470 88548 138540 141100 158790 175130 154920 161600 207880 145590 179320 163780 182360 147200 152470 125440 164260 160590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259960000 15710 2053 14882 29904;29905 23968;23969 23968 2 9606 Homo sapiens 0.03709135235044414 LEQLDHR Unmodified 909.46683 0.46682918 1587 A0A5H1ZRP4;Q8WX92-2;Q8WX92 NELFB Negative elongation factor B yes no 0 0 0 2.5 0.5 1 1 36.223 36.28 3 0.001278 8114 20230619_1882_Aki_TMTPro18x_K_F3 138.83 74.022 36017 25881 32691 36947 42215 39054 41328 39893 51019 44243 49688 52085 50479 38731 43398 39294 56861 51420 33253 23795 33647 36419 43033 39362 42010 40822 51356 44724 51084 52034 51141 40457 44969 40173 54236 48730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74116000 15711 1587 14883 29906;29907 23970 23970 1 9606 Homo sapiens 0.008474435778566658 LEQLELEK Unmodified 1000.5441 0.54407645 1283 C9J3Q3;C9J6N5;C9JQ40;C9JW51;A0A1C7CYX8;Q9H098;Q9H098-2 FAM107B Protein FAM107B yes no 0 0 0 3.5 0.5 1 1 55.333 55.359 2 0.00059888 16347 20230619_1883_Aki_TMTPro18x_K_F4 172.23 87.735 362250 304830 331420 366920 293990 309790 390830 365290 391570 484080 480690 400880 553290 413960 364510 635270 556680 463800 334790 279580 338900 364810 310780 319000 388540 372610 402840 480160 491410 411850 553190 438360 386050 624400 530130 442670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 156980000 15712 1283 14884 29908;29909 23971;23972 23972 2 9606 Homo sapiens 0.04382617003534506 LEQPDPGAVAAAAILR Unmodified 1590.873 0.87295558 316 A0A140VJH7;A0A024R529;Q3LXA3;Q9UFX5 DAK;DKFZp586B1621 Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes no 0 0 0 7 0 1 61.54 61.579 3 0.00016746 18481 20230619_1887_Aki_TMTPro18x_K_F7 97.073 73.324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15713 316 14885 29910 23973 23973 1 9606 Homo sapiens 0.10115401843449945 LEQQVPVNQVFGQDEMIDVIGVTK Unmodified 2685.3684 0.36836727 3567;2399 B3KS36;P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;Q49AJ9;B5MCW2;H7C422;H7C3M2 RPL3;rpl3 60S ribosomal protein L3 no no 0 0 0 4.5 0.5 1 1 64.212 64.238 3 3.3756E-13 19847 20230619_1885_Aki_TMTPro18x_K_F5 122.04 108.81 30977 25102 28742 29083 24771 31956 29855 29944 32552 35742 35075 34647 42001 30308 33717 40891 36960 43769 28625 23017 29330 29090 26223 32044 29905 30884 33135 35772 36163 35086 42215 32000 34652 41056 35379 41517 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68217000 15714 2399;3567 14886 29911;29912 23974 23974 1 9606 Homo sapiens 0.09309782215541418 LEQSEAQLGR Unmodified 1129.5728 0.57275081 476 A0A024R7W9;Q92905;Q59GH5 COPS5 COP9 signalosome complex subunit 5 yes no 0 0 0 2.5 0.5 1 1 40.985 41.044 2 7.9347E-07 10299 20230619_1881_Aki_TMTPro18x_K_F2 142.98 106.28 124070 86151 115440 146100 144780 146180 155500 147320 190290 161370 182610 202860 200290 154230 157990 176910 217280 185020 114550 79392 118610 142490 148300 147790 157180 150870 191490 163630 188580 202330 201800 161940 164750 177830 207100 175770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127740000 15715 476 14887 29913;29914 23975;23976 23975 2 9606 Homo sapiens 0.013147346326832121 LEQSTIVK Unmodified 916.52295 0.52294707 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 7 0 1 46.254 46.342 2 0.0053697 11930 20230619_1887_Aki_TMTPro18x_K_F7 113.71 59.298 72897 58669 77587 83748 76587 86892 72014 77950 104060 101250 117420 129370 93952 94044 91545 95841 133030 133270 67434 53916 78437 82523 79577 87402 73921 80889 104690 101930 118870 128760 96656 98243 95442 98366 126880 126180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181340000 15716 3789 14888 29915 23977 23977 1 9606 Homo sapiens 0.06134651694674176 LEQYTSAIEGTK Unmodified 1338.6667 0.66671078 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;C9J813;B4E3I0;A0A6Q8PGI1 CALD1 Caldesmon yes no 0 0 0 6 0.816 1 1 1 55.39 55.457 3 5.6854E-07 16206 20230619_1886_Aki_TMTPro18x_K_F6 148.89 125.51 163970 138910 151210 165430 201290 227110 204140 189060 241660 194280 201050 194510 212690 181680 200180 232030 203340 208250 151560 127380 155530 165660 205300 224090 206710 195900 242350 196230 208670 197130 216130 190450 204130 230950 194560 198030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1870399999.9999998 15717 3798 14889 29916;29917;29918 23978;23979 23978 2 9606 Homo sapiens 0.01092408944282397 LERENAEVDGDDDAEEMEAK Oxidation (M) 2279.9336 0.9335791 3389 Q53XC0;P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 1 1 1 0 2 41.24 41.24 3;4 1.8759E-07 10647 20230619_1880_Aki_TMTPro18x_K_F1 113.54 104.72 40192 30182 37633 39586 46349 50177 47869 45440 52155 50051 55903 54078 53690 44309 47242 64105 62402 68200 37125 27718 38588 39337 47491 49823 48303 46871 53034 50462 57065 54424 54568 47088 49086 64269 59599 64712 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 131430000 15718 3389 14890 29919;29920 23980;23981 23980 1998 2 9606 Homo sapiens -0.15519034998442294 LERENAEVDGDDDAEEMEAKAED Oxidation (M) 2595.0402 0.040229012 3389 Q53XC0;P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 1 2 1 0 1 43.386 43.386 3 5.947E-05 11614 20230619_1880_Aki_TMTPro18x_K_F1 75.646 69.866 8211 11585 8796.7 10689 9507.5 7845.3 9683.7 10099 7878 9765.1 8041.3 8595.8 8166 7275.8 10877 8743.2 9794.4 8783.2 7631.3 10586 8905.9 10841 9794.5 8218.2 9702.8 10156 8149.3 9841.6 8261.2 8730.1 8460.8 7626.4 10940 8772.3 9374.7 8345.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36502000 15719 3389 14891 29921 23982 23982 1998 1 9606 Homo sapiens -0.19348949294544582 LESCGVTSDNCR Unmodified 1396.5711 0.57111261 1206 A0A140VJT8;P13489;A0A024RC87 RNH1 Ribonuclease inhibitor yes no 0 0 0 2.5 0.5 2 2 37.352 37.409 2;3 2.6403000000000003E-31 8523 20230619_1882_Aki_TMTPro18x_K_F3 280.11 269.36 98524 48318 93048 98876 122890 126290 116250 117450 143390 116150 131400 148040 153640 121860 126060 103630 173510 157500 90833 44736 95454 95963 125080 125350 118410 120550 144010 118470 136440 147820 154780 125710 131140 107530 165450 149080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 675950000 15720 1206 14892 29922;29923;29924;29925 23983;23984 23984 2 9606 Homo sapiens -0.1113101050991645 LESDYEILER Unmodified 1265.6139 0.61394692 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2;A0A804HK69;A0A804HKU1;A0A804HIG2 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 2 0.816 1 1 1 54.746 54.77 2 1.0837E-09 16484 20230619_1881_Aki_TMTPro18x_K_F2 209.6 142.91 368520 283290 313820 346900 286420 336250 345700 352250 351020 440730 474700 482330 497260 414550 471950 534780 465070 538450 340220 259960 323140 345010 301510 341190 345500 361160 362560 441700 482320 485570 505430 436240 480360 535490 445550 511120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1697299999.9999998 15721 1736 14893 29926;29927;29928 23985;23986 23986 2 9606 Homo sapiens -0.00823549118513256 LESEEEGVPSTAIR Unmodified 1515.7417 0.74166663 56 A0A024QZP7;Q5H9N4;P06493;I6L9I5;A0A024QZJ8;P06493-2;E5RIU6;B7Z3D6 CDC2;DKFZp686L20222;CDK1 Cyclin-dependent kinase 1 yes no 0 0 0 1.5 0.5 1 1 46.574 46.614 2 1.3729999999999998E-21 12952 20230619_1880_Aki_TMTPro18x_K_F1 224.42 169.36 61379 55851 63851 59065 63791 71641 69286 61315 62218 72456 68793 41500 67265 46217 70515 53535 45389 45637 56815 51149 64630 59585 66383 71278 69334 63648 64109 71685 70046 43760 68732 47981 70168 53301 43672 43429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150430000 15722 56 14894 29929;29930 23987 23987 1 9606 Homo sapiens 0.004425466848715587 LESEGSPETLTNLR Unmodified 1544.7682 0.76821574 3075 H3BS72;Q9P035;H3BPZ1;Q9P035-2;H3BRL8;H3BMZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 0 0 0 3 0 1 50.444 50.52 2 3.0922E-28 14339 20230619_1882_Aki_TMTPro18x_K_F3 248.05 198.34 53519 42313 50244 63931 56686 67821 68779 61770 81470 69925 67311 80692 89273 75887 80314 75043 80087 95209 49452 38914 51511 62787 58753 68109 68995 63777 81711 70601 70792 81205 89990 78424 81785 76575 76734 90161 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114780000 15723 3075 14895 29931 23988 23988 1 9606 Homo sapiens 0.01762235576211424 LESENDEYER Unmodified 1282.5313 0.53133951 3337 O94906 PRPF6 Pre-mRNA-processing factor 6 yes yes 0 0 0 1 0 1 38.226 38.226 2 5.1358E-07 9288 20230619_1880_Aki_TMTPro18x_K_F1 210.93 201.98 97152 72853 92184 102930 115880 134880 125500 129200 167740 129410 153360 172470 169200 152410 135980 120220 190250 184650 89749 66961 94506 101850 118880 133780 127250 132370 167780 132170 158800 172320 170720 156210 141750 125000 181470 174720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179780000 15724 3337 14896 29932 23989 23989 1 9606 Homo sapiens -0.09862490917316791 LESFMETGK Oxidation (M) 1056.4798 0.47976163 3310 O75569-3;O75569-2;O75569;B4DJC7;A0A7I2V2I8;A0A7I2V3J2 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes no 0 1 0 5 0 1 49.481 49.557 3 0.033545 13587 20230619_1885_Aki_TMTPro18x_K_F5 50.034 29.196 33586 25959 33135 26956 29321 35898 33004 33644 38718 32445 32388 37567 37111 33768 39951 35659 39222 38136 31042 23784 33605 27287 30892 35570 33251 34485 38858 33024 33786 37760 37878 35048 40509 35961 37527 36199 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11869000 15725 3310 14897 29933 23990 23990 1941 1 9606 Homo sapiens -0.046219061449164656 LESGSICK Unmodified 892.43242 0.43241751 3455 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 0 0 0 6 0 1 43.986 44.077 2 0.0015162 11272 20230619_1886_Aki_TMTPro18x_K_F6 141.39 94.963 295590 169510 378380 372910 503800 595300 400600 474560 460010 364570 493850 590160 503750 459920 471780 283530 616050 566990 273450 156990 379360 362330 510770 581720 412040 489950 466330 381340 506210 583790 512600 469520 487130 304310 587700 535710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 131880000 15726 3455 14898 29934 23991;23992 23992 2 9606 Homo sapiens -0.01810140625252643 LESIDGNEEESMK Oxidation (M) 1495.6348 0.6348183 2710 Q8TEQ6;B7ZLC9 GEMIN5 Gem-associated protein 5 yes no 0 1 0 1 0 1 47.079 47.079 3 0.0006074 13146 20230619_1880_Aki_TMTPro18x_K_F1 88.163 70.617 20849 17095 21542 21271 24463 25331 27386 25869 32831 27058 29839 31634 32530 28148 26909 39946 39491 40855 19284 15686 21870 21197 25246 25323 27602 26424 33001 27433 30880 31811 32870 29771 28229 39958 37672 38790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13879000 15727 2710 14899 29935 23993 23993 1628 1 9606 Homo sapiens -0.09317371591851042 LESIISGAALMADSSCTR Unmodified 1880.8972 0.89719777 1411;3506 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;H0YBB8;P26232-2;P26232-5;P26232;P26232-3;Q49AD3 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 0 1 0 1 64.169 64.169 3 9.6573E-24 20195 20230619_1880_Aki_TMTPro18x_K_F1 197.75 187.38 5718.1 4263.2 3822.7 6454.4 5720.8 5385.7 6621.9 5738.1 6794.4 6951.7 8520.2 7396.6 9349.8 5605 8852.1 8376.8 9623.9 8825.5 5269.9 3921.8 4085.5 6317.7 5812.2 5535.9 6625.4 5875.6 6980 6972.3 8690.3 7435.1 9476 5999.1 9049.4 8399 9195.1 8380.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24298000 15728 1411;3506 14900 29936 23994 23994 1 9606 Homo sapiens -0.00801493847529855 LESLSAATTFEPLEPVK Unmodified 1830.9615 0.96149581 4222 Q8N1F7;H3BVG0;H3BV11;H3BRI8;H3BM93;H3BNN5 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 6 0 1 63.037 63.085 3 0.0057139 19532 20230619_1886_Aki_TMTPro18x_K_F6 66.982 54.622 66364 49475 52756 74297 64518 70709 72831 67168 83549 72912 75143 65299 82283 62585 71176 74456 75111 82311 61226 45508 55037 72881 66345 71669 73245 69053 84153 73181 77734 66584 83174 65339 72809 75059 71878 78070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 387700000 15729 4222 14901 29937 23995 23995 1 9606 Homo sapiens 0.07925352572510747 LESPTVSTLTPSSPGK Unmodified 1599.8356 0.83556702 259 B3KMB7;A0A087WTV6;A0A024R3Q9;Q4W8W1;A0A0S2Z5U6;Q96C36;Q8NCZ0 PYCR2;P5CR2;DKFZp434J218 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 yes no 0 0 0 7.5 0.5 1 1 52.164 52.239 3 3.7982E-08 14481 20230619_1888_Aki_TMTPro18x_K_F8 98.676 31.424 367980 306940 338520 420180 276080 356180 359610 352320 384760 554560 486070 578960 658820 556850 374770 746470 685670 743890 340080 281900 345940 414010 294410 364810 358710 365790 395560 550120 501780 585800 653690 585190 405310 745720 653440 706360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 445250000 15730 259 14902 29938;29939 23996 23996 1 9606 Homo sapiens 0.05964265787133627 LESTLNYGMER Oxidation (M) 1327.6078 0.60781569 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258 COPB2 Coatomer subunit beta' yes no 0 1 0 4 0 1 46.861 46.903 2 0.0010852 12561 20230619_1883_Aki_TMTPro18x_K_F4 96.665 77.993 99935 80512 85607 102420 105180 97185 107140 104210 112910 118500 111510 114830 111080 92945 106420 139500 120700 121840 92288 73896 88529 101560 107630 98888 108080 106380 114720 118850 114490 116030 113180 99041 109280 138340 115350 115910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 279210000 15731 3031 14903 29940 23997 23997 1782 1 9606 Homo sapiens -0.04288390621718463 LESTLNYGMER Unmodified 1311.6129 0.61290107 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258 COPB2 Coatomer subunit beta' yes no 0 0 0 5 0 1 51.062 51.137 2 1.4126E-07 14239 20230619_1885_Aki_TMTPro18x_K_F5 153.66 138.08 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15732 3031 14903 29941 23998 23998 1 9606 Homo sapiens -0.030440867590868947 LESTVGSPEKPLSDLGK Unmodified 1755.9254 0.92544466 4528 Q9H7Z6-2;Q9H7Z6;H3BMX5 KAT8 Histone acetyltransferase KAT8;Histone acetyltransferase yes no 0 0 1 7 0 1 53.814 53.881 3 0.050491 15279 20230619_1887_Aki_TMTPro18x_K_F7 53.008 34.644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15733 4528 14904 29942 23999 23999 1 9606 Homo sapiens 0.07771895395717365 LETDSRPVSR Unmodified 1158.5993 0.59929991 2397 B4DHE5;B4DXB7;Q9NXD3;H0Y6U5;B3KRQ2;Q86XI2;Q86XI2-2 NCAPG2 Condensin-2 complex subunit G2 yes no 0 0 1 4 0.816 1 1 1 31.623 31.696 3 5.1481E-06 6179 20230619_1883_Aki_TMTPro18x_K_F4 141.71 86.729 60510 34603 50985 53946 57755 67890 59797 65040 84398 58913 68356 64842 68743 62830 54907 43159 74421 56638 55774 31883 52709 53049 59612 67482 60929 66452 83854 60110 70854 65458 69539 63837 57075 44502 70894 53717 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64621000 15734 2397 14905 29943;29944;29945 24000 24000 1 9606 Homo sapiens 0.026344235240230773 LETGAFDGR Unmodified 964.46141 0.46140945 571 A0A024R9G3;Q9BUN8-2;Q9BUN8 DERL1 Derlin-1 yes no 0 0 0 2.5 0.5 1 1 42.362 42.434 2 0.0042691 10653 20230619_1882_Aki_TMTPro18x_K_F3 95.531 70.608 185760 137360 179140 185490 207570 235010 216920 209060 283160 257410 319700 364780 281200 253540 321180 274910 314060 290600 171610 126190 183010 183980 213770 233240 220200 216700 285980 260840 324980 361430 290180 266170 325240 277000 300400 275930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139310000 15735 571 14906 29946;29947 24001 24001 1 9606 Homo sapiens -0.022242800046115008 LETGPGGASR Unmodified 943.47231 0.47230849 1321 A0A1W2PQQ1;Q5HYW2;A0A0J9YY72;A0A0J9YW69;Q5HYW2-2 NHSL2 NHS-like protein 2 yes no 0 0 0 4 0 1 34.02 34.074 2 0.0039201 7161 20230619_1883_Aki_TMTPro18x_K_F4 95.358 63.003 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15736 1321 14907 29948 24002 24002 1 9606 Homo sapiens -0.0016887763032400471 LETGQFLTFR Unmodified 1210.6346 0.63462279 1889 A1LT96;A0AVT1;A0AVT1-3;A0AVT1-4 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 0 1.5 0.5 1 1 60.058 60.064 2 0.0006486 18631 20230619_1881_Aki_TMTPro18x_K_F2 133.81 88.177 111620 94729 101200 120540 103230 121220 121280 122100 134220 128160 118660 122820 135610 109640 132380 144110 132940 145960 103150 86927 103830 119600 107630 122520 121630 124850 135420 129040 123280 124500 137680 115400 134770 144330 127280 138560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109230000 15737 1889 14908 29949;29950 24003 24003 1 9606 Homo sapiens 0.03773086051796781 LETHMTPEMFR Unmodified 1390.6373 0.63734168 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 6 0 1 48.685 48.764 3 0.0018155 13370 20230619_1886_Aki_TMTPro18x_K_F6 82.912 72.434 185520 166020 166840 137670 200060 172360 167530 197670 222280 76419 71202 68166 93956 57067 92619 80171 89276 79326 171500 151770 171270 142100 204070 172490 172510 196810 216950 83689 81164 69336 95027 60573 93941 80182 85382 75390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39527000 15738 3811 14909 29951 24004 24004 1 9606 Homo sapiens -0.042351498772177365 LETLGIGQR Unmodified 985.55564 0.55564418 1191 A0A8Q3WK80;A0A8Q3WK74;Q9NZL9-4;Q9NZL9-2;Q9NZL9;A0A140VJP2;A8K7A4;H7C0X7;B7Z1X8;A0A8Q3WLC0;A0A8Q3SIE5;A0A8Q3WK93 MAT2B Methionine adenosyltransferase 2 subunit beta yes no 0 0 0 7.5 0.5 1 1 50.465 50.544 2 5.0043E-08 13745 20230619_1888_Aki_TMTPro18x_K_F8 198.92 127.78 397380 316210 340860 344490 424430 500980 384740 361750 432790 426480 429840 464730 475760 378480 414410 541080 489720 493200 366950 289800 352250 347640 433650 491550 391700 380910 438310 428840 443390 467200 481100 401870 427340 538050 467860 468940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 414480000 15739 1191 14910 29952;29953 24005 24005 1 9606 Homo sapiens 0.06228858817530636 LETVGSIFSR Unmodified 1107.5924 0.59242362 3144 J3QLR8;Q9Y3D9 MRPS23 28S ribosomal protein S23, mitochondrial yes no 0 0 0 1.5 0.5 1 1 59.231 59.237 2 1.7048E-05 18302 20230619_1881_Aki_TMTPro18x_K_F2 180.27 154.97 121620 109350 118320 129030 118320 147740 131090 138950 154170 147820 149140 148340 165510 134190 154590 165460 159840 179430 112500 100250 120550 128950 123410 147740 132190 142760 155570 148950 153980 150120 167840 140610 157740 166510 153020 170200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67329000 15740 3144 14911 29954;29955 24006 24006 1 9606 Homo sapiens 0.04293110643448017 LEVAPISDIIAIK Unmodified 1380.8228 0.82281749 1075 P13804;A0A0S2Z3L0;A0A0S2Z3M4;P13804-2;H0YLU7;A0A8I5KVL5;A0A8I5KYH4;A0A8I5KYP7;A0A8I5KUF3;H3BV91;H0YKF0;A0A8I5KT03;A0A8I5KUR2;A0A8I5KVC9;H0YK49 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes no 0 0 0 8 0 1 64.021 64.042 3 3.5254E-08 19544 20230619_1888_Aki_TMTPro18x_K_F8 145.81 110.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15741 1075 14912 29956 24007 24007 1 9606 Homo sapiens 0.14763899185572882 LEVDVIQER Unmodified 1099.5873 0.58733824 2543 B4DMG1;Q9NP66;H0YKL0 HMG20A High mobility group protein 20A yes no 0 0 0 2 0 1 50.944 50.989 2 0.0028495 14883 20230619_1881_Aki_TMTPro18x_K_F2 97.965 69.239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15742 2543 14913 29957 24008 24008 1 9606 Homo sapiens 0.04152806780825813 LEVEANNAFDQYR Unmodified 1567.7267 0.72668527 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;B1AK85;A0A6I8PRV6 CAPZB F-actin-capping protein subunit beta yes no 0 0 0 3 0 1 54.708 54.755 2 4.5042E-47 16247 20230619_1882_Aki_TMTPro18x_K_F3 275.76 237.46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15743 1434 14914 29958 24009 24009 1 9606 Homo sapiens -0.034469003924641584 LEVELHIK Unmodified 979.57023 0.57023162 4801 yes no 0 0 0 6 0 1 51.265 51.342 3 0.0063114 14478 20230619_1886_Aki_TMTPro18x_K_F6 81.548 0 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15744 4801 14915 29959 24010 24010 1 9606 Homo sapiens 0.07962930965675241 LEVIIPER Unmodified 967.57023 0.57023162 562 A0A8V8TNE2;A0A024R9A9;Q9NPD8;A0A8V8TN93;A0A8V8TQ15 UBE2T Ubiquitin-conjugating enzyme E2 T yes no 0 0 0 4.5 0.5 1 1 54.697 54.736 2 0.010559 15725 20230619_1885_Aki_TMTPro18x_K_F5 93.374 63.189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15745 562 14916 29960;29961 24011;24012 24012 2 9606 Homo sapiens 0.08514930965668555 LEVLDSTK Unmodified 903.49131 0.49131259 1449 A0A384NPX8;A0A384MTZ1;P47985;P0C7P4 UQCRFS1;UQCRFS1P1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11;Putative cytochrome b-c1 complex subunit Rieske-like protein 1 yes no 0 0 0 4.5 0.5 1 1 52.401 52.475 2 0.0010185 15154 20230619_1883_Aki_TMTPro18x_K_F4 122.19 45.13 82122 69773 78987 79602 99707 108650 105830 100630 132580 80617 97988 89704 102850 84004 90077 94513 100490 90778 75930 63958 80828 79984 102120 107480 107110 102810 131980 82942 102310 90541 104200 87400 92415 94600 95984 86297 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46251000 15746 1449 14917 29962;29963 24013;24014 24013 2 9606 Homo sapiens 0.03570658940736848 LEVQAEEERK Unmodified 1229.6252 0.62518031 4506 Q9H307;A8K964 PNN Pinin yes no 0 0 1 2 0.816 1 1 1 39.798 39.84 3 9.856E-06 9717 20230619_1881_Aki_TMTPro18x_K_F2 155.24 111.04 698100 482760 596990 706120 710770 815520 650660 734030 995620 836420 973900 927510 954680 809130 660730 939340 1077200 980070 644120 444050 617180 695750 728890 814160 670370 758040 993310 843060 998430 933740 961390 845460 701520 943330 1026000 930800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 579880000 15747 4506 14918 29964;29965;29966 24015 24015 1 9606 Homo sapiens 0.019552729756242115 LEVQATDREENK Unmodified 1430.7001 0.70013617 2724 P11387;B9EG90;A0A7P0T852;Q9BVT2 TOP1 DNA topoisomerase 1 yes no 0 0 1 2 0.816 1 1 1 39.107 39.147 3 8.7909E-07 9241 20230619_1882_Aki_TMTPro18x_K_F3 145.92 105.96 1092900 840410 1043700 1123200 1290600 1276200 1134600 1126200 1562700 1448100 1625900 1524800 1639500 1356500 1255300 1480800 1848000 1572600 1009800 771890 1068200 1112700 1316600 1275800 1166400 1169500 1570200 1449200 1664300 1538800 1654900 1411700 1317000 1490600 1760500 1493700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 947250000 15748 2724 14919 29967;29968;29969 24016;24017 24017 2 9606 Homo sapiens 0.002014107161812717 LEYALVK Unmodified 834.48511 0.485105 1636 A0A7P0TAV2;A0A6Q8PGK3;A0A7P0T9G7;B7ZLW8;Q99707;B4DST3;A0A7P0TAJ0;Q99707-2;Q6MZH4;B1ANE3 MTR;DKFZp686A22123 Methionine synthase yes no 0 0 0 8 0 1 55.568 55.63 2 0.069801 16004 20230619_1888_Aki_TMTPro18x_K_F8 81.784 14.027 107860 92844 102700 116050 118910 149420 127900 127130 171030 109330 116480 115640 106460 95578 140890 132550 125390 124050 99724 85177 105110 115700 122700 147990 129710 130940 169410 111780 121700 116510 110670 101170 141760 132160 120120 117920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18751000 15749 1636 14920 29970 24018 24018 1 9606 Homo sapiens 0.06124185499857049 LEYGDNAEK Unmodified 1037.4666 0.46655441 4012 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;H0YJB9 C14orf166 UPF0568 protein C14orf166 yes no 0 0 0 3 0.816 1 1 1 43.507 43.572 2;3 2.1211E-06 11530 20230619_1881_Aki_TMTPro18x_K_F2 190.02 116.4 223350 134380 248870 262250 300340 413760 287160 312710 387290 252230 363590 390040 359490 297720 317780 240740 406700 390670 206380 124180 251660 255980 308300 404060 293430 324730 387330 262650 374090 386400 365060 307310 328310 251510 388160 369530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 151160000 15750 4012 14921 29971;29972;29973 24019;24020 24019 2 9606 Homo sapiens -0.050680209326628756 LEYGGLGR Unmodified 863.45012 0.45011648 2311 B2RD36;Q96DG6 CMBL Carboxymethylenebutenolidase homolog yes no 0 0 0 6 0 1 45.81 45.896 2 0.0030214 11949 20230619_1886_Aki_TMTPro18x_K_F6 120.62 86.883 264590 217980 267180 256770 274880 327350 271520 271940 292180 267210 406570 398230 341330 364980 360720 313560 439020 448630 244690 199890 271260 257090 285010 324360 274810 281570 300700 274400 408890 397280 351880 374640 370520 323670 419360 424640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 304370000 15751 2311 14922 29974 24021 24021 1 9606 Homo sapiens 0.012929426919072284 LFADAVQELLPQYK Unmodified 1633.8716 0.87155859 1091 A0A0S2Z4A5;P33993;B2RBA6;P33993-2;A0A0S2Z441 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 1.5 0.5 1 1 65.465 65.469 3 0.0010277 20733 20230619_1880_Aki_TMTPro18x_K_F1 80.469 52.499 17945 17082 17423 18378 15245 18639 17222 19729 19859 20657 21983 24712 22407 22802 23442 23263 21519 25805 16606 15644 17716 18467 16079 18855 17347 20101 20171 20947 22497 24830 22926 23592 23714 23516 20637 24467 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104450000 15752 1091 14923 29975;29976 24022;24023 24023 2 9606 Homo sapiens 0.07997767754659435 LFAPQQILQCSPAN Unmodified 1585.7923 0.79226242 1407 B5BU32;A0A384MDV9;K7ERV3;P04183;B5BUF9;A0A024R8N6 TK1 Thymidine kinase;Thymidine kinase, cytosolic yes no 0 0 0 2 0 1 63.776 63.784 2 0.0091236 20325 20230619_1881_Aki_TMTPro18x_K_F2 77.662 60.991 18114 17149 15441 16301 10712 14733 14115 15526 21428 11423 11782 9506.9 12299 12063 11112 12991 11325 13682 16745 15690 15843 16526 11637 15040 14263 15698 20994 11730 12547 9842.4 12495 12405 11344 13073 10850 12980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36638000 15753 1407 14924 29977 24024 24024 1 9606 Homo sapiens 0.022797975288995076 LFAVFERPQGSPAAR Unmodified 1644.8736 0.87362428 4738 Q9Y4D7-2;Q9Y4D7 PLXND1 Plexin-D1 yes no 0 0 1 5 0 1 54.626 54.693 3 3.6012E-05 15734 20230619_1885_Aki_TMTPro18x_K_F5 99.796 53.204 41312 36267 44149 42184 33798 37558 35096 42267 41839 43087 37354 35475 40719 34572 43283 49319 40161 34292 38239 33247 44434 42081 35965 38448 35570 42861 42095 43260 38685 36355 41573 36455 43828 48471 38415 32752 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25807000 15754 4738 14925 29978 24025 24025 1 9606 Homo sapiens 0.07698241283128482 LFCIPVHGIR Unmodified 1210.6645 0.66448313 489 A0A024R830;A0A140VJL8;P29218;P29218-3;H0YBL1 IMPA1 Inositol monophosphatase 1 yes no 0 0 0 6 0 1 54.179 54.256 3 3.5901E-07 15712 20230619_1886_Aki_TMTPro18x_K_F6 144.09 103.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15755 489 14926 29979 24026 24026 1 9606 Homo sapiens 0.06757746516132102 LFCLTLHR Unmodified 1058.5695 0.56952011 2863 E1NZA1;Q92616;B4DM32 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 6 0 1 52.933 53.01 3 1.1291999999999998E-21 15191 20230619_1886_Aki_TMTPro18x_K_F6 203.19 163.18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15756 2863 14927 29980 24027 24027 1 9606 Homo sapiens 0.04257813044955583 LFCTSCNVVLNHVR Unmodified 1717.8392 0.83922938 2761 C9JUJ0;Q9UFW8 CGGBP1 CGG triplet repeat-binding protein 1 yes no 0 0 0 5 0 1 51.841 51.915 3 2.7997E-05 14622 20230619_1885_Aki_TMTPro18x_K_F5 109.51 93.966 45070 40100 38688 44485 41289 54962 50341 46534 59450 45654 43366 42355 47052 41628 44899 47937 48180 48672 41649 36743 39923 44701 43024 54574 50485 48105 59373 46129 45412 43133 47824 43299 45891 48106 46070 46219 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81086000 15757 2761 14928 29981 24028 24028 1 9606 Homo sapiens 0.009023338083579802 LFCVGFTK Unmodified 970.49462 0.49462383 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;B7Z3M5;D6RB09;E9PFI5;H0Y9Y4;H0Y8L7;D6R9B6;D6RAS7 RPS3A 40S ribosomal protein S3a yes no 0 0 0 4.5 0.5 1 1 61.282 61.309 3 0.00065939 18857 20230619_1883_Aki_TMTPro18x_K_F4 113.89 83.319 861310 723490 739470 827780 658190 759730 854320 838230 898220 865210 699840 608050 853860 696390 650890 931200 933290 864820 795630 663240 760700 826780 695830 775340 851340 851690 905110 865250 733400 632580 857160 728230 682530 927370 889760 822360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1572699999.9999998 15758 3694 14929 29982;29983 24029;24030 24029 2 9606 Homo sapiens 0.008196305137403215 LFDDSDER Unmodified 995.4196 0.41960421 2579 B4DRS4;O43719 HTATSF1 HIV Tat-specific factor 1 yes no 0 0 0 1 0 1 45.81 45.81 2 0.014429 12626 20230619_1880_Aki_TMTPro18x_K_F1 93.992 28.215 50603 32068 43211 51328 51020 58988 54332 54149 72395 65659 81552 89616 92544 78975 65702 80219 100670 107580 46668 29542 44683 50313 52536 58924 55145 55973 73063 66495 83737 89507 92856 81910 69289 82077 96026 101860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28015000 15759 2579 14930 29984 24031 24031 1 9606 Homo sapiens -0.07828880483805278 LFDFPGR Unmodified 850.43374 0.43373813 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 3.67 3.09 1 1 1 58.246 58.266 2 0.029188 17719 20230619_1880_Aki_TMTPro18x_K_F1 95.62 67.048 492120 417620 453180 462320 415390 486710 460040 458070 497240 546010 538540 493910 578490 485900 523200 610360 556420 591910 454860 382710 463080 463730 435980 489760 462630 472310 506460 545490 552070 503780 586460 508160 535340 610070 532300 562260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 796800000 15760 617 14931 29985;29986;29987 24032;24033;24034 24032 3 9606 Homo sapiens 0.0025386152581177157 LFDFVNAK Unmodified 952.50182 0.5018177 315 A0A024R4Z6;Q08945;A0A0U1RRK2 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 1.67 0.471 1 2 62.347 62.351 2 0.0035002 19657 20230619_1881_Aki_TMTPro18x_K_F2 119.21 82.191 631450 517280 558480 644560 524770 668090 603360 637120 653230 759000 680340 696250 493290 521640 279170 1108400 361760 790020 583330 474640 573490 640700 550750 672880 605620 656210 664220 758260 688190 704560 499990 573900 297160 1083800 348290 752170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 642150000 15761 315 14932 29988;29989;29990 24035;24036;24037 24036 3 9606 Homo sapiens 0.023666863858124998 LFDHPESPTPNPTEPLFLAQAEVYK Unmodified 2839.4069 0.40686127 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 6 0 1 62.787 62.835 4 1.4319E-36 19388 20230619_1886_Aki_TMTPro18x_K_F6 218.44 206.31 86175 78749 83503 83004 60753 68327 82553 72582 70043 100450 94879 96414 101220 93924 94979 117170 107610 101580 79721 72116 84701 83345 65457 70356 81633 74659 73186 99849 96487 97988 102860 98140 97510 116440 102800 96664 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151540000 15762 3606 14933 29991 24038 24038 1 9606 Homo sapiens 0.06073411121724348 LFDIFSQQVATVIQSR Unmodified 1850.989 0.98904797 4389 Q96QK1;Q53FR4;Q5HYM2 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 5.5 0.5 1 1 66.767 66.81 3 1.442E-42 21064 20230619_1886_Aki_TMTPro18x_K_F6 214.65 185.16 17123 12560 15578 16529 16387 15767 16109 18178 17927 16854 19738 21413 25156 20166 19110 19639 23908 25247 15812 11537 15967 16359 16937 16061 16327 18367 18235 17241 20410 21487 25208 20827 19805 20057 22838 23916 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49623000 15763 4389 14934 29992;29993 24039;24040 24040 2 9606 Homo sapiens 0.09759300623454692 LFDLDEK Unmodified 878.43855 0.43854874 2427 H0YCN7;E9PL53;H0YEK5;E9PMD2;J3KND1;G1UCX3;B3KVU5;E9PRZ1;Q96ER3 SAAL1;SPACIA1 Protein SAAL1 yes no 0 0 0 4 0 1 58.852 58.854 2 0.0057088 17842 20230619_1883_Aki_TMTPro18x_K_F4 112.17 52.966 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15764 2427 14935 29994 24041 24041 1 9606 Homo sapiens -0.005532991220889016 LFDQAFGLPR Unmodified 1162.6135 0.61349341 3383 V9HW43;P04792;A0A6Q8PFK8;A0A6Q8PGK1;A0A6Q8PHJ6;A0A6Q8PFE7;A0A6Q8PF43;A0A6Q8PHA6;A0A6Q8PH65;A0A6Q8PGY2;A0A8E9ZT92 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 0 0 0 2.5 0.5 1 1 62.418 62.437 2 8.1687E-05 19697 20230619_1881_Aki_TMTPro18x_K_F2 149.72 116.46 1616900 1280700 1487000 1704900 1471100 1770800 1558600 1492700 1734800 2459400 2176500 2163600 2696100 2135400 2288500 2781500 2387300 2611700 1493800 1176100 1522500 1687100 1533300 1779000 1572600 1570200 1779200 2424100 2234900 2209000 2714500 2238700 2342500 2773800 2284800 2481600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2487700000 15765 3383 14936 29995;29996 24042;24043 24042 2 9606 Homo sapiens 0.03869120742933774 LFDSICNNK Unmodified 1109.5175 0.51754412 1253;3415;3738;3385 P04899-4;P04899;Q96C71;P04899-2;B3KX51;P04899-6;P04899-3;P04899-5;B3KP24;Q6LCB5;Q6AWC5;A0A142CHG9;P09471-2;P08754;P63096;P63096-2;A0A3B3ITM0 GNAI2;WUGSC:H_LUCA15.1;DKFZp686O0962;GNAO1;GNAI3;GNAI1 Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(o) subunit alpha;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-1 no no 0 0 0 4.5 3.5 1 1 54.84 54.874 2;3 7.1698E-06 16351 20230619_1880_Aki_TMTPro18x_K_F1 201.39 140.48 485310 375790 469220 466260 460570 468730 506950 443200 502970 574900 574680 579460 658690 550370 528550 671540 631900 659180 448470 344870 477780 463550 479920 473400 508400 458310 515970 574050 589900 587160 663380 575150 546260 671780 603780 626130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 921740000 15766 3385;1253;3415;3738 14937 29997;29998 24044;24045 24044 2 9606 Homo sapiens -0.032833951594511745 LFDSTTLEHQK Unmodified 1317.6565 0.65648044 1678 Q13347;A0A7I2YQF8;Q5U0F4;Q53HU7;A0A7I2V613;A0A7I2V607;A0A7I2V3N2;A0A7I2V2M3;A0A7I2V640;A0A7I2YQI2;A0A7I2V3U3;A0A7I2V5V8;A0A7I2YQU2;A0A7P0MRT9;A0A7I2V685;A0A7I2YQI6;Q5TFK1;A0A7I2YQC8;A0A7I2YQT9;A0A7I2V4S8;A0A7I2V3K6;A0A7I2YQP9;A0A7I2V4C2 EIF3I Eukaryotic translation initiation factor 3 subunit I yes no 0 0 0 5 0 1 48.937 49.014 3 0.011584 13387 20230619_1885_Aki_TMTPro18x_K_F5 66.663 49.338 183000 151670 156720 163720 211100 239540 201320 187070 261470 117870 128460 110930 107890 89454 134700 121220 111990 101310 169030 138980 162270 165350 214930 235270 205230 192890 257190 122950 137090 112350 112070 94646 135170 120250 107300 96473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 302290000 15767 1678 14938 29999 24046 24046 1 9606 Homo sapiens 0.010358460096995259 LFDVCTVSR Unmodified 1095.5383 0.53827956 3773 Q00534;Q8NI11 CDK6 Cyclin-dependent kinase 6 yes no 0 0 0 8 0 1 53.616 53.688 2 8.9005E-06 15122 20230619_1888_Aki_TMTPro18x_K_F8 175.91 125.87 274620 243960 258770 303900 220550 208890 223670 217790 198570 318810 258750 240510 313640 228350 237110 341490 287000 276980 253950 223780 263780 300720 231870 218830 224810 224760 206830 314150 264880 247380 314470 242100 245790 337410 274050 263800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 468970000 15768 3773 14939 30000 24047 24047 1 9606 Homo sapiens -0.0056680477980535215 LFDVGGQR Unmodified 890.46102 0.46101552 1253 A0A142CHG9;P09471-2;P09471;Q8N6I9;B3KP89;H3BTM2;A0A1W2PP38 GNAO1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 7.5 0.5 1 1 49.237 49.309 2 0.0027034 13236 20230619_1888_Aki_TMTPro18x_K_F8 122.5 85.527 312690 273630 280350 304250 286710 320490 313950 293290 315540 340420 429130 394750 387090 341480 385720 394670 428250 447000 289010 250740 287720 305030 298090 322330 315130 302900 325830 343130 432910 396680 396390 356810 394650 398660 409460 423940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309780000 15769 1253 14940 30001;30002 24048;24049 24049 2 9606 Homo sapiens 0.011403450661987335 LFDWANTSR Unmodified 1108.5302 0.53015772 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q96T67;Q5T9A4;Q5T9A4-3;A0A5K1VW56;Q9H834;Q5SV16;Q8N3E6;Q5T2N8 ATAD3A;ATAD3B;DKFZp761L1023;ATAD3C ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B;ATPase family AAA domain-containing protein 3C yes no 0 0 0 1.5 0.5 1 1 59.02 59.027 2 0.0067905 18242 20230619_1881_Aki_TMTPro18x_K_F2 107.56 84.007 148560 123450 149200 160090 144980 182890 185270 190970 203960 178770 158370 160050 193480 157080 167080 201730 184000 186800 137390 113320 151570 158970 152170 183300 185020 194160 204910 180800 166190 163300 195080 164540 171490 201070 175900 177570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157490000 15770 4603 14941 30003;30004 24050 24050 1 9606 Homo sapiens -0.019766157049161848 LFDYFPK Unmodified 928.46945 0.46945494 3411 Q8TBT6;P08574 CYC1 Cytochrome c1, heme protein, mitochondrial yes no 0 0 0 2 0.816 1 1 1 62.549 62.562 3 0.024087 19776 20230619_1881_Aki_TMTPro18x_K_F2 67.035 45.507 261430 212670 249310 303680 247040 286850 322340 318850 335800 284050 295870 346320 388970 333570 337780 391180 396630 450510 241640 195440 254630 298870 258870 291940 321010 322710 339650 290900 309920 348380 391710 347610 347920 395310 379290 427070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274930000 15771 3411 14942 30005;30006;30007 24051 24051 1 9606 Homo sapiens 0.0023589898280533816 LFEAQGKPELK Unmodified 1258.6921 0.69213767 1460 A0A384NKN4;Q9NUG6 PDRG1 p53 and DNA damage-regulated protein 1 yes no 0 0 1 1 0 1 51.716 51.716 3 0.074849 15084 20230619_1880_Aki_TMTPro18x_K_F1 44.543 28.653 52847 38583 51031 53678 48029 46745 56288 48469 59905 61212 63142 58026 60084 52842 54454 62159 65352 71046 48820 35460 51954 52873 50296 47848 56384 49776 60960 61084 64461 58887 61172 55187 56118 62786 62463 67365 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42596000 15772 1460 14943 30008 24052 24052 1 9606 Homo sapiens 0.07313928257372027 LFECDRDQMYYNLLK Oxidation (M) 2022.9179 0.91793321 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJG8;A0A804HI44 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 1 1 7.5 0.5 1 1 59.978 60.019 3 0.084137 17827 20230619_1887_Aki_TMTPro18x_K_F7 44.132 40.845 47469 40933 46952 54645 44500 43251 46982 50721 48872 69077 73387 82657 76973 71062 64793 87327 80072 94407 43904 37579 47735 53904 46431 44790 47335 51806 50743 69186 74352 82886 77907 74521 67075 87819 76564 89540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141470000 15773 1723 14944 30009;30010 24053 24053 1129 1 9606 Homo sapiens -0.05260903467865319 LFEEPEDPSNR Unmodified 1331.5994 0.59935949 1204 A0A140VJT0;P63151;P63151-2;Q56VW8;A0A590UJY3;A0A590UJJ1;Q6ZP32;Q59GC6;E5RFR9;Q9Y2T4-2;Q9Y2T4;Q9Y2T4-4;Q9Y2T4-3 PPP2R2A;PPP2R2C Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform yes no 0 0 0 1.5 0.5 1 1 49.098 49.131 2 1.6626E-12 13967 20230619_1880_Aki_TMTPro18x_K_F1 214.54 186.37 155020 132760 143050 165810 140760 165980 166090 155020 169740 185800 201490 211300 217860 187830 200400 218390 218060 245660 143290 121800 146440 164710 147150 167570 166130 160030 174060 186880 206040 212550 221010 196170 205170 220440 208660 232940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 423860000 15774 1204 14945 30011;30012 24054;24055 24054 2 9606 Homo sapiens -0.05317621266658534 LFEEPKPK Unmodified 986.54368 0.54368251 1390 A0A2X0TVY0;C9JME2;Q9Y4F1;Q9Y4F1-2;A0A1B0GV68 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 0 0 1 7 0 1 47.356 47.444 3 0.036857 12390 20230619_1887_Aki_TMTPro18x_K_F7 64.485 26.324 110820 87485 105800 90339 99293 114110 110030 112140 123850 148760 147270 156400 177850 150830 136670 172080 168000 150260 102410 80145 107700 91405 104000 113570 110810 115630 126480 148580 151360 158210 178600 156860 141620 171280 160320 143010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73755000 15775 1390 14946 30013 24056 24056 1 9606 Homo sapiens 0.049872420743326984 LFEFAGYDVLR Unmodified 1328.6765 0.6764876 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 8 0 1 63.976 63.998 3 2.7661E-06 19550 20230619_1888_Aki_TMTPro18x_K_F8 147.91 117.65 17140 11987 12521 20560 16904 16553 15277 18246 19987 18058 16347 17554 18605 16862 20068 19735 18062 18118 15799 11048 13213 19982 17172 17075 15646 18519 19957 18247 17057 17819 18993 17562 20268 19699 17301 17225 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49263000 15776 3650 14947 30014 24057 24057 1 9606 Homo sapiens 0.025296417403069427 LFEGNALLR Unmodified 1031.5764 0.57637963 299 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 RPS9 40S ribosomal protein S9 yes no 0 0 0 3.67 3.09 1 1 1 57.409 57.432 2 0.00015418 16711 20230619_1888_Aki_TMTPro18x_K_F8 146.81 67.341 927050 772700 828960 916060 784530 950820 946760 936230 1019600 1016600 873530 833240 1057300 851630 907780 1114800 900270 943670 856570 708600 850240 913900 823640 958410 947470 959610 1029400 1017700 910940 855250 1065800 891960 926480 1105900 861740 897960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4703100000 15777 299 14948 30015;30016;30017 24058;24059;24060 24060 3 9606 Homo sapiens 0.061854491971644165 LFEISDIVIK Unmodified 1175.6802 0.680176 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 7.5 0.5 1 1 64.228 64.253 3 0.00017787 19646 20230619_1888_Aki_TMTPro18x_K_F8 119.68 81.959 82253 61984 76797 84486 68740 75122 80652 77456 88508 92578 86386 94046 102360 76936 106700 108260 78617 121730 75978 56947 78388 83338 72366 76725 80890 79409 89698 92777 89522 94821 104060 81659 106900 109020 75790 115320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308920000 15778 4414 14949 30018;30019 24061 24061 1 9606 Homo sapiens 0.09936311514184126 LFELLEK Unmodified 890.51132 0.51131975 2629;940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370;B7ZAX9;B4DZC0;O60264 SMARCA1;SMARCA5 Probable global transcription activator SNF2L1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 no no 0 0 0 7 0.816 1 1 1 63.581 63.615 2 0.0064807 19483 20230619_1887_Aki_TMTPro18x_K_F7 132.69 0 1127600 899860 1005100 1172000 974390 1320600 1144200 1144500 1269900 1380300 1346500 1392100 1586700 1282400 1319900 1670000 1359200 1527500 1041600 826140 1032100 1162700 1021400 1319400 1148000 1187800 1290600 1382700 1388600 1409300 1598600 1347000 1351000 1662900 1301200 1451700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 839140000 15779 940;2629 14950 30020;30021;30022 24062;24063 24062 2 9606 Homo sapiens 0.06168454671330892 LFELYTK Unmodified 912.49567 0.49566969 4239 Q8N806;H0YJM2;H0YJA0;G3V3Q6;G3V2G3 UBR7 Putative E3 ubiquitin-protein ligase UBR7 yes no 0 0 0 1.5 0.5 1 1 61.456 61.456 2;3 0.0072494 19055 20230619_1880_Aki_TMTPro18x_K_F1 126.67 90.472 77928 64863 79380 83446 61638 77818 75436 80695 83220 92631 82195 81431 97441 80758 82165 98937 93988 92092 72076 59532 80279 82676 65874 79158 75558 82554 84380 92618 85040 83163 98234 84303 84563 98702 89799 87548 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27266000 15780 4239 14951 30023;30024 24064;24065 24064 2 9606 Homo sapiens 0.03592168154284536 LFEMAYK Unmodified 900.44153 0.44152563 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 1.5 0.5 2 2 59.797 59.803 2;3 0.0075954 18378 20230619_1880_Aki_TMTPro18x_K_F1 123.96 77.392 613130 562230 651730 619240 567680 805390 723910 722920 781690 624000 537280 445530 537660 417310 716160 494610 485180 328770 567670 515070 657670 623400 601750 798020 722620 741340 783000 630840 562660 459630 556780 435570 711060 487380 465360 314600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 555840000 15781 1488 14952 30025;30026;30027;30028 24066;24067 24066 2 9606 Homo sapiens -0.012677472689460956 LFEMAYK Oxidation (M) 916.43644 0.43644025 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 1 0 7 0 1 53.312 53.379 3 0.023355 15078 20230619_1887_Aki_TMTPro18x_K_F7 71.029 47.472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15782 1488 14952 30029 24068 24068 995 1 9606 Homo sapiens -0.025120511315549265 LFEMVLGPAAYNVPLPK Unmodified 1858.0063 0.0062779369 3954 Q16891-2;Q16891;B9A067;Q16891-4;B4DQY2;Q16891-3;B4DT20;Q3B7X4;B4E2B5;Q05DN3;D6RAW4 IMMT MICOS complex subunit MIC60 yes no 0 0 0 4 0 1 66.026 66.038 3 0.016032 20835 20230619_1883_Aki_TMTPro18x_K_F4 55.885 38.379 3951.1 5320.4 3475.7 4406.4 5035.9 3692.2 2910.4 4770.6 4190.2 5299.9 6208.9 4072.9 4796.2 3292 5103.5 2872.3 5287.5 3432.6 3664.6 4858 3595.2 4521.3 5039.9 3823.3 3105.2 4807.6 4281.6 5285.6 6198.3 4166.2 4947.2 3405.5 5181 2932.6 5044.4 3261.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6123800 15783 3954 14953 30030 24069 24069 1 9606 Homo sapiens 0.11159504904935602 LFEQNVQR Unmodified 1032.5352 0.53524309 305 A0A024R4T4;P61081;M0QX69 UBE2M NEDD8-conjugating enzyme Ubc12 yes no 0 0 0 5.5 0.5 1 1 44.298 44.384 2 0.0024479 11395 20230619_1886_Aki_TMTPro18x_K_F6 126.57 35.481 353630 296630 301130 336910 380020 437250 412380 385230 513760 486780 668670 816010 496120 519930 675150 702980 891690 1046200 326640 271910 311740 338260 389770 433370 416980 400040 523280 496430 672490 803120 521310 555600 695550 722390 852140 989510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 459650000 15784 305 14954 30031;30032 24070 24070 1 9606 Homo sapiens 0.02027688157704688 LFEVGGSPANTR Unmodified 1246.6306 0.63060004 1092 A0A0S2Z4B5;Q08209;A0A0S2Z4C6;Q08209-2;Q08209-3;E7ETC2;Q08209-5;Q5F2F8;P16298-4;P16298-2;P16298-3;P16298;B7Z781;E9PK68;E9PPC8;Q9UMB2 PPP3CA;PPP3CB Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 7 0.816 1 1 1 49.928 50.006 2 1.1333E-17 13521 20230619_1888_Aki_TMTPro18x_K_F8 233.84 211.06 250300 201070 218660 228460 208610 233600 241320 234110 288800 278250 282850 275030 313780 253090 257920 327760 317580 328080 231180 184350 224660 228620 218530 235900 242910 240350 291320 278790 291730 278720 316580 265830 266930 327960 303350 311570 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 280160000 15785 1092 14955 30033;30034;30035 24071;24072 24072 2 9606 Homo sapiens 0.017149965580983917 LFFAGEHTIR Unmodified 1189.6244 0.62439245 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5QJR3;A0A8I5KRF4;R4GMP9 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 0 1.5 0.5 1 1 49.035 49.068 3 3.9576E-14 13976 20230619_1880_Aki_TMTPro18x_K_F1 226.9 177.54 52443 49365 49140 58466 43859 49979 49187 52781 52350 68817 59007 51416 67441 66896 67631 65256 75048 72696 48513 45251 50166 58188 46137 51260 49421 54154 53519 68149 60566 53522 68642 68404 69160 66034 71718 68977 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 362140000 15786 1785 14956 30036;30037 24073 24073 1 9606 Homo sapiens 0.037165231172366475 LFFLQVK Unmodified 893.53747 0.53747492 3456;2184 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;J7M2B1;Q6PJT4;V9GZ54;P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;Q05CU6;Q6PKD3;V9HWC0;P26038;A0A8V8TKR9;P35241-3;E9PNV3;E9PQ82;A0A2R8Y5P0 EZR;HEL-S-105;EZR-ROS1;MSN;RDX;HEL70 Ezrin;Tyrosine-protein kinase receptor;Radixin;Moesin no no 0 0 0 6 0 1 63.339 63.388 2 0.056304 19639 20230619_1886_Aki_TMTPro18x_K_F6 89.903 27.383 239810 236530 223860 207190 290960 373300 282990 291130 396020 41007 31998 50978 60765 50194 88338 64423 59848 64587 221910 216240 229730 214000 297360 362930 288970 296280 381410 55911 51435 51480 62583 52556 87635 64595 57570 61326 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 513910000 15787 3456;2184 14957 30038 24074 24074 1 9606 Homo sapiens 0.08644768633473632 LFFPVIYDVK Unmodified 1239.6903 0.69034675 2341 Q96IQ6;B3KM57;Q9UIV1-2;Q9UIV1;H0YAV9;H0YBT3 CNOT7 CCR4-NOT transcription complex subunit 7 yes no 0 0 0 4 0 1 65.067 65.076 3 0.0034022 20457 20230619_1883_Aki_TMTPro18x_K_F4 73.985 47.312 6758.5 4720.5 4967.1 6147.1 6644.4 6046 7575 6501.5 7040.6 5814.9 4996.4 7570.9 9922.3 6349.8 6827 8270.3 6335.7 8123 6230 4336.2 5226.7 6088.2 6784.9 6134.7 7560.9 6597.4 7125.8 5967.9 5455.8 7560.2 9808.4 6699.8 6977.6 8267.4 6079.1 7710.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11884000 15788 2341 14958 30039 24075 24075 1 9606 Homo sapiens 0.08008919239387069 LFFWMQEPK Unmodified 1224.6002 0.60015154 3948 Q16186;B4DMP7 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes no 0 0 0 3.5 0.5 1 1 64.543 64.564 3 0.020574 20246 20230619_1883_Aki_TMTPro18x_K_F4 63.486 46.46 7792.7 8069.6 9161.3 8817.4 8242.3 9857.1 8540.7 9891.5 11111 10955 12464 11091 10767 11322 14101 14486 11352 10182 7228.1 7389.3 9176.7 8862.1 8648.6 9890.4 8682.3 10126 11225 11021 12647 11275 11213 11821 14131 14267 10880 9720.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16466000 15789 3948 14959 30040;30041 24076 24076 1 9606 Homo sapiens -0.003164533606650366 LFGAAEVQR Unmodified 989.52943 0.52942943 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 6.5 0.5 1 1 48.244 48.327 2 0.012003 12791 20230619_1887_Aki_TMTPro18x_K_F7 95.815 66.439 424700 362160 367280 398850 425720 503570 457290 467120 548260 446290 457530 407280 446620 376870 458320 516060 507570 456640 392370 331860 379010 401240 438950 500420 461980 479030 549490 451200 472950 414630 456820 397090 468870 512860 484810 434530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 401150000 15790 1022;3868 14960 30042;30043 24077 24077 1 9606 Homo sapiens 0.034245896460333825 LFGALLER Unmodified 917.53345 0.53345218 4451 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog yes yes 0 0 0 2.5 0.5 1 1 62.14 62.16 2 0.031513 19499 20230619_1881_Aki_TMTPro18x_K_F2 78.728 14.161 186500 161340 180500 188820 169640 217500 187310 181130 232770 206470 166030 181900 223600 191380 221640 228280 205710 229610 172470 147920 183770 188810 177870 216890 189230 188250 232000 206700 176190 186070 226310 199090 224570 228860 197140 217980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149360000 15791 4451 14961 30044;30045 24078 24078 1 9606 Homo sapiens 0.07138679139745818 LFGAPEPSTIAR Unmodified 1257.6717 0.67173657 4130 Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A8I5KSP1;A0A0B4J210;E5RH50;H0YC33 LARP1 La-related protein 1 yes no 0 0 0 5.33 3.09 1 1 1 53.24 53.288 2 4.5844E-05 15719 20230619_1880_Aki_TMTPro18x_K_F1 166.07 102.51 294700 260400 293520 350690 275910 289870 308490 304550 312030 362660 386460 390300 387760 322770 359040 404990 384810 441110 272630 239060 298320 345850 288680 298100 309430 311850 320860 364070 393100 392700 394270 339600 367300 407520 368320 418370 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 599900000 15792 4130 14962 30046;30047;30048 24079;24080;24081 24079 3 9606 Homo sapiens 0.05320757597564807 LFGASCPVAVLSSFLTPER Unmodified 2050.0557 0.055747325 1190 A0A140VJN9;Q9NTJ4-3;Q9NTJ4-2;Q9NTJ4;Q9NTJ4-4;B4DH23;Q59GG8;H3BRV3;H3BQJ2;B4DHU1;H3BMJ3;H3BUW3 MAN2C1 Alpha-mannosidase 2C1 yes no 0 0 0 6 0 1 66.975 67.018 3 1.8004E-07 21184 20230619_1886_Aki_TMTPro18x_K_F6 112.01 106.17 2768.5 1592.4 3399.8 3592.3 3239.6 2996.5 4198.8 2253.6 3433.1 2550.6 2972.6 3529.3 2789.2 2805.9 2899.5 2869.4 2694.9 4217.7 2560.1 1475.5 3400 3451.2 3393.8 3057 4149.8 2370.8 3518.6 2594.3 3068.9 3511.6 2860.5 2921.1 2935.7 2957.8 2591 3986.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6104300 15793 1190 14963 30049 24082 24082 1 9606 Homo sapiens 0.07272168123063238 LFGATNPK Unmodified 846.45995 0.45995289 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 3 0 1 49.172 49.25 3 0.0016888 13799 20230619_1882_Aki_TMTPro18x_K_F3 94.262 55.043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15794 2297 14964 30050 24083 24083 1 9606 Homo sapiens 0.030581306972862876 LFGETDYDAFQR Unmodified 1460.6572 0.65720872 2302 B2RBU0;Q99633;Q5T9P8;Q5T9P7 PRPF18 Pre-mRNA-splicing factor 18 yes no 0 0 0 4 0 1 59.626 59.628 2 0.065872 18173 20230619_1883_Aki_TMTPro18x_K_F4 57.348 36.447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15795 2302 14965 30051 24084 24084 1 9606 Homo sapiens -0.054693593412594055 LFGFQPLASR Unmodified 1134.6186 0.61857879 4366 Q96IR7 HPDL 4-hydroxyphenylpyruvate dioxygenase-like protein yes yes 0 0 0 6 0 1 61.61 61.664 2 0.0013932 18858 20230619_1886_Aki_TMTPro18x_K_F6 107.9 79.648 110280 96233 106040 118590 139420 191370 147870 143040 221850 83087 83040 77278 89165 76655 92358 103510 97320 81501 101980 88270 108720 118810 142840 186740 150710 147830 215830 87357 91967 78828 91052 80479 94190 102330 92957 77701 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94571000 15796 4366 14966 30052 24085 24085 1 9606 Homo sapiens 0.056654246055586555 LFGLPNDS Unmodified 861.42323 0.42323303 4368 Q96J01;D6REC9 THOC3 THO complex subunit 3 yes no 0 0 0 4.5 0.5 1 1 63.206 63.213 2 0.012412 19682 20230619_1883_Aki_TMTPro18x_K_F4 95.793 83.888 29292 27126 28022 31769 21801 27457 28544 30823 31643 38463 34352 30286 39609 29965 33995 39375 38310 40677 27098 24864 28504 31653 23348 28169 28505 31456 32209 38199 35319 31121 39968 31449 34935 39470 36629 38613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48182000 15797 4368 14967 30053;30054 24086;24087 24086 2 9606 Homo sapiens -0.013021659192872903 LFGPYVWGR Unmodified 1093.5709 0.57090032 4514 Q9H4A4;Q7RU04;C9JMZ3;H7C2T3 RNPEP Aminopeptidase B yes no 0 0 0 6.5 0.5 1 1 62.571 62.614 2 0.0037282 19291 20230619_1886_Aki_TMTPro18x_K_F6 96.51 65.138 376970 327010 353360 340370 324590 387450 347810 358040 452670 454270 401100 427510 442370 411430 457510 497690 510890 492220 348520 299490 360400 343480 340530 387650 352700 370300 453430 453230 416040 434580 451260 429380 468110 498340 488170 467640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281250000 15798 4514 14968 30055;30056 24088 24088 1 9606 Homo sapiens 0.027857704053758425 LFGQESGPSAEK Unmodified 1248.5986 0.59863121 4456 Q9BWH2;H7C0K8 FUNDC2 FUN14 domain-containing protein 2 yes no 0 0 0 4 0 1 49.462 49.497 2 2.9784E-07 13746 20230619_1883_Aki_TMTPro18x_K_F4 134.75 6.8372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15799 4456 14969 30057 24089 24089 1 9606 Homo sapiens -0.015724159157116446 LFGYEMAEFK Oxidation (M) 1249.5689 0.56891099 620 Q9UKD2;A0A024RAE1 MRTO4;C1orf33 mRNA turnover protein 4 homolog yes no 0 1 0 6.5 0.5 1 1 60.645 60.695 3 0.00044814 18089 20230619_1887_Aki_TMTPro18x_K_F7 97.565 68.225 98732 84049 100510 115810 121380 111950 110150 113610 112580 109100 115010 106190 111620 92916 114690 137860 111900 120250 91331 77192 102330 114260 123930 113580 111830 115850 114680 110400 117710 107610 114150 98646 116550 136750 107150 114370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75165000 15800 620 14970 30058;30059 24090 24090 356 1 9606 Homo sapiens -0.04589071185432658 LFGYEMAEFK Unmodified 1233.574 0.57399637 620 Q9UKD2;A0A024RAE1 MRTO4;C1orf33 mRNA turnover protein 4 homolog yes no 0 0 0 7.5 0.5 1 1 62.996 63.025 3 0.0012562 19095 20230619_1888_Aki_TMTPro18x_K_F8 91.584 65.645 52985 48141 47430 48218 38231 48194 48608 45922 57472 49733 41733 42823 50080 41149 57479 54671 53952 42850 48985 44069 48514 48723 40790 48700 48682 47187 57422 49871 43961 43737 51197 43211 58102 54076 51579 40865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 330620000 15801 620 14970 30060;30061 24091 24091 1 9606 Homo sapiens -0.0334476732280109 LFHQAFISFR Unmodified 1264.6717 0.671677 4212 Q8IYB8 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes yes 0 0 0 7 0 1 56.421 56.479 3 0.0016482 16392 20230619_1887_Aki_TMTPro18x_K_F7 73.499 44.987 13102 13383 13128 16477 14419 13941 16500 14428 18533 13702 16226 15724 15625 15504 16297 16549 16662 17915 12134 12269 13372 16350 14915 14308 16572 14702 18653 13960 16730 15872 16014 16046 16582 16691 15947 16997 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58009000 15802 4212 14971 30062 24092 24092 1 9606 Homo sapiens 0.04992802388187556 LFHSLEK Unmodified 872.4756 0.47560295 3041 Q86VS8;H0YDM4 HOOK3 Protein Hook homolog 3 yes no 0 0 0 4.5 3.5 1 1 47.267 47.315 3 0.0013197 13282 20230619_1880_Aki_TMTPro18x_K_F1 123.69 61.031 36923 24723 32210 33859 35081 33778 40037 34585 43808 39145 39392 34259 41119 34317 36369 37963 45880 40986 34067 22727 33162 33440 36315 34190 40180 35414 44232 39184 40664 35017 41692 35607 37596 38258 43772 38915 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49551000 15803 3041 14972 30063;30064 24093;24094 24093 2 9606 Homo sapiens 0.034264172143252836 LFHTAPNVPHYAK Unmodified 1493.7779 0.77793298 3642 P53582;Q5CZ91;H0Y955 METAP1;DKFZp781C0419 Methionine aminopeptidase 1 yes no 0 0 0 3.5 0.5 1 1 44.348 44.407 4 8.2743E-08 11578 20230619_1882_Aki_TMTPro18x_K_F3 156.14 132.46 112010 57700 115860 111870 120480 127280 111230 122890 143340 123990 112550 104860 118030 104230 121720 142100 130190 132460 103360 53359 117400 108660 124530 127360 113730 125830 143000 124720 117140 107390 120520 109530 124290 141580 124500 125900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255380000 15804 3642 14973 30065;30066 24095 24095 1 9606 Homo sapiens 0.050795131629001844 LFHVLDCTWNR Unmodified 1459.7031 0.70305348 1162 B4DVL3;A0A140T9D0;Q8NBI6-3;Q8NBI6-2;Q8NBI6 XXYLT1 Xyloside xylosyltransferase 1 yes no 0 0 0 3 0 1 58.524 58.554 3 6.2144E-05 17835 20230619_1882_Aki_TMTPro18x_K_F3 127.51 109.2 13953 10544 13002 14317 15196 13011 14693 17545 16740 19525 19256 16917 21791 16667 15968 20199 18300 21562 12888 9686.6 13322 14134 15571 13368 14918 17652 17058 19536 19726 17294 21869 17403 16493 20304 17509 20453 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6433700 15805 1162 14974 30067 24096 24096 1 9606 Homo sapiens -0.008409926399963297 LFIFETFCR Unmodified 1231.606 0.6059652 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;A0A7I2V3I2;E5RGA2;A0A7I2V5P9;E5RHS5 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 0 3.5 0.5 1 1 64.377 64.397 2 0.00011591 20176 20230619_1883_Aki_TMTPro18x_K_F4 153.04 132.52 80369 57427 64081 63707 53385 66836 75551 71723 104750 79085 55257 54408 75640 60188 65444 82536 69787 74340 74132 52663 66302 63904 57047 67457 75743 73121 103060 78853 59908 56566 76071 63115 67062 82068 66761 70679 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84050000 15806 1659 14975 30068;30069 24097 24097 1 9606 Homo sapiens -0.0005735484899105359 LFIGGLNTETNEK Unmodified 1434.7355 0.73545904 3564;3963 P38159;P38159-2;H3BT71;H0Y6E7;H3BR27;P38159-3;H3BNC1;Q96E39;Q2VIN3;A0A1B0GUK8 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 0 0 6.5 0.5 1 1 58.589 58.646 2 1.0084E-68 17550 20230619_1886_Aki_TMTPro18x_K_F6 343.19 273.76 288450 250280 283620 303580 298590 318310 326590 295260 326160 345510 336390 315510 395490 295490 309760 372510 351620 324650 266790 229540 288860 302400 309550 320310 327650 304690 332950 345580 347060 321100 397410 309700 319130 370260 335840 308960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2457300000 15807 3564;3963 14976 30070;30071 24098;24099 24098 2 9606 Homo sapiens 0.03548073243996441 LFIGGLNVQTSESGLR Unmodified 1689.905 0.90498399 3836 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 2.5 0.5 1 1 61.671 61.69 3 3.3445E-19 19114 20230619_1882_Aki_TMTPro18x_K_F3 198.1 169.29 162300 150800 169150 178320 174070 209270 194450 184920 199350 177520 205130 182380 206210 164220 210060 204280 195730 204920 150250 138230 171420 178230 181050 208680 195050 190430 202940 180010 210140 184480 210500 172170 212720 204700 187470 194590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 214450000 15808 3836 14977 30072;30073 24100;24101 24101 2 9606 Homo sapiens 0.0876276952653825 LFIGGLPNYLNDDQVK Unmodified 1804.9359 0.93594977 2658 B5BU25;P26368-2;P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 0 0 0 8 0 1 63.78 63.802 3 2.2899E-11 19420 20230619_1888_Aki_TMTPro18x_K_F8 161.21 143.51 275030 225470 246080 294100 245510 306830 294640 285640 307180 352600 339980 356960 397000 327600 357200 402790 350560 395600 254100 206980 252720 291440 256690 308710 294650 295120 313840 352830 349930 361170 401360 342920 363830 403030 335790 375660 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 271520000 15809 2658 14978 30074 24102;24103;24104 24103 3 9606 Homo sapiens 0.06567922840781648 LFIGGLSFETTDDSLR Unmodified 1769.8836 0.88357984 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;Q65ZQ3;P51991-2;B4DDB6;B4E3E6 HNRNPA3;D10S102;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 6.67 0.471 1 2 64.146 64.184 2;3 3.2325E-43 19999 20230619_1886_Aki_TMTPro18x_K_F6 366.15 316.34 87690 53070 82440 94750 65353 96380 87455 83465 114820 103640 95763 128180 131380 125220 108800 123120 116000 159720 80912 48974 84030 92192 70077 96916 87737 86753 114680 104480 100920 128790 131990 129150 111520 125770 111220 151160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 261320000 15810 1469;2450 14979 30075;30076;30077 24105;24106 24105 2 9606 Homo sapiens 0.029433397071670697 LFIGGLSFETTDDSLREHFEK Unmodified 2440.1911 0.19105483 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;Q65ZQ3;P51991-2;B4DDB6;B4E3E6 HNRNPA3;D10S102;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 1 6 0.816 1 1 1 61.983 62.029 4 7.2324E-08 18738 20230619_1887_Aki_TMTPro18x_K_F7 112.44 97.51 187660 139520 175650 178880 149830 187350 151350 155280 225550 206210 186840 215400 208650 202170 200520 254380 221590 271720 173330 128110 179050 177500 158080 188030 154880 162240 224090 206070 194670 217750 212090 211660 205530 255580 212160 257710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2721700000 15811 1469;2450 14980 30078;30079;30080 24107 24107 1 9606 Homo sapiens 0.02856694727734066 LFIGGLSFETTDESLR Unmodified 1783.8992 0.89922991 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;A0A024RC46;Q0VAC0;A0A7I2V2L6;F8VZ49;B4E0B5;Q32P51;A0A024QZ98;B4DP35;F8VTQ5;F8W646;A0A7I2YQ85 HNRNPA1;HNRPA1;hCG_2020860;HNRNPA1L2;RP11-78J21.1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 5.5 1.12 1 1 1 1 63.965 63.997 3 4.0153E-34 19908 20230619_1886_Aki_TMTPro18x_K_F6 259.68 237.21 427520 336230 368240 373650 325530 448220 342330 379060 486290 409790 405600 445680 485740 431060 412630 531950 473930 534760 394770 308230 378430 375340 343130 445860 348820 392760 483960 413880 423660 450410 489960 450380 424950 532730 453280 507670 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2805700000 15812 640 14981 30081;30082;30083;30084 24108;24109;24110;24111 24109 4 9606 Homo sapiens 0.03863626224233485 LFIGGLSFETTEESLR Unmodified 1797.9149 0.91487997 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A087WUI2;I6L957;A0A7I2V4N0;A0A7I2YQN4 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 6.4 1.02 1 2 1 1 65.601 65.642 3 4.184E-43 19910 20230619_1886_Aki_TMTPro18x_K_F6 286.09 256.75 403760 327460 395270 418100 355000 443880 376580 337800 578200 398660 453010 492350 532410 507580 532680 566620 444480 642690 373260 300550 401780 415010 373340 444360 384600 354260 572050 403180 474480 496240 541190 526030 537060 572600 427500 608900 4 4 4 4 4 4 4 3 4 4 4 4 4 4 4 4 4 4 2289900000 15813 3491 14982 30085;30086;30087;30088;30089 24112;24113;24114;24115 24113 4 9606 Homo sapiens 0.047839127412999005 LFIGNLPR Unmodified 928.54944 0.54943659 2142;4410 A8K9U0;Q9BWF3;E9PB51;Q9BWF3-4;D6R9K7;J3QRR5;Q9BWF3-3;Q9BWF3-2;Q9BQ04;E9PLB0;E9PM61;U3KQD5 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B no no 0 0 0 4.5 0.5 1 1 57.038 57.072 2 0.00095637 16685 20230619_1885_Aki_TMTPro18x_K_F5 152.26 66.175 353140 312800 348330 369380 344190 432240 383030 375830 437840 402320 366240 327330 394330 326050 345870 429810 370830 340330 326670 286780 354380 369220 359350 430930 385650 388530 440160 403060 380080 335890 399240 341840 354400 425030 354350 324300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 676450000 15814 2142;4410 14983 30090;30091 24116;24117 24117 2 9606 Homo sapiens 0.08230385376657523 LFIHNHEQHHK Unmodified 1438.7218 0.72181509 2219 B4DGN8;B2R5M9;Q02809;Q02809-2 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes no 0 0 0 7.5 0.5 1 1 30.28 30.34 5 4.0185E-06 5761 20230619_1888_Aki_TMTPro18x_K_F8 147.91 100.35 58839 39564 50000 60877 67430 78134 57920 65684 85237 70006 72118 83012 85868 76197 78168 92093 84410 86035 54278 36419 51854 59900 68514 77373 59798 68055 84757 70966 75282 83451 86870 79629 80044 91917 80714 81775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57865000 15815 2219 14984 30092;30093 24118 24118 1 9606 Homo sapiens 0.020003050460672966 LFISGLPFSCTK Unmodified 1368.7112 0.71115855 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DYA2;H0YHU8 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 0 5.5 0.5 1 1 63.588 63.635 3 6.1243E-07 19755 20230619_1886_Aki_TMTPro18x_K_F6 147.26 123.51 94093 76904 87876 102040 72660 99066 99509 95383 111630 123330 115850 139280 156640 147330 100820 194230 190210 214560 86957 70612 89671 100910 77565 100260 99161 98488 113310 123650 120550 140990 156130 154160 108950 195250 181290 203480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128320000 15816 1555 14985 30094;30095 24119 24119 1 9606 Homo sapiens 0.04155141556771014 LFIVDAR Unmodified 832.48069 0.48068833 3993 Q53FE8;Q9UNZ2;Q9UNZ2-5;Q53FF5;Q9UNZ2-6;Q9UNZ2-4;Q6ZQU3 NSFL1C NSFL1 cofactor p47 yes no 0 0 0 8 0 1 55.038 55.105 2 0.023306 15760 20230619_1888_Aki_TMTPro18x_K_F8 100.74 33.749 107890 77786 91398 99513 84176 101800 117110 127950 142620 149400 120270 118940 154770 121710 119340 188360 140010 141610 99566 71429 94186 98773 89028 103330 116950 129400 143070 148890 125920 122320 155140 128990 123510 185380 133770 134990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77350000 15817 3993 14986 30096 24120 24120 1 9606 Homo sapiens 0.05774721076943479 LFIYNPTTGEFLGR Unmodified 1626.8406 0.84059282 3652 P54709;H7C547;F8WBY4 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes no 0 0 0 3 0 1 63.473 63.504 2 4.55E-08 19887 20230619_1882_Aki_TMTPro18x_K_F3 150.04 111.02 88987 65390 83238 91961 80197 80539 95949 99088 112030 119770 118310 108910 144810 102500 113160 139170 144700 137710 82187 60104 85035 90537 83926 82739 96349 100490 113540 119580 122160 110910 145340 108000 117500 139100 138090 130840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220970000 15818 3652 14987 30097 24121 24121 1 9606 Homo sapiens 0.05224614440408004 LFKPPQPPAR Unmodified 1149.6659 0.66586334 2400 Q5BKY2;Q6IB98;Q53HR0;Q53HG0;B3KS98;O15372 EIF3H;EIF3S3 Eukaryotic translation initiation factor 3 subunit H yes no 0 0 1 6.5 0.5 1 1 45.954 46.041 3 0.052138 11904 20230619_1886_Aki_TMTPro18x_K_F6 50.353 6.6496 83022 74702 79296 79495 80134 88658 88680 88034 105470 91444 85336 82569 90264 66832 86019 92761 88430 89853 76787 68419 80877 80055 83428 88974 89434 90060 105680 91982 88707 83707 91708 70883 87716 92614 84596 85368 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363600000 15819 2400 14988 30098;30099 24122 24122 1 9606 Homo sapiens 0.09701703876544343 LFLAGYELTPTMR Unmodified 1510.7854 0.78538612 252 Q4G0F5;A0A024R3L9 VPS26B Vacuolar protein sorting-associated protein 26B yes no 0 0 0 3 0 1 63.426 63.457 3 0.0051663 19859 20230619_1882_Aki_TMTPro18x_K_F3 74.987 47.506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15820 252 14989 30100 24123 24123 1 9606 Homo sapiens 0.050424846482655994 LFLDGEEEK Unmodified 1078.5183 0.51825563 4586 Q9NRN7;E9PLW6 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes no 0 0 0 2.5 1.12 1 1 1 1 55.278 55.303 2 2.203E-10 16550 20230619_1880_Aki_TMTPro18x_K_F1 178.94 94.445 316680 260760 291120 289240 232710 291450 295980 295990 330490 378920 373280 381380 428790 346000 319350 468160 420290 425930 292640 238990 296990 289950 248400 294670 295990 304300 336710 378490 383340 385980 430610 364570 333060 465670 401200 404980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 935410000 15821 4586 14990 30101;30102;30103;30104 24124;24125;24126 24124 3 9606 Homo sapiens -0.017862772387616133 LFLDHPHR Unmodified 1033.5457 0.5457482 2863 E1NZA1;Q92616;A0A024RBS1;B4DM32 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 7.5 0.5 1 1 36.828 36.854 3 0.00065613 8213 20230619_1888_Aki_TMTPro18x_K_F8 116.37 63.585 46961 39320 57709 55444 60415 64716 61729 66504 63131 64979 82342 88259 84417 69977 69153 59884 91025 90023 43513 36123 57756 54790 62518 64765 62254 67766 64996 66432 83696 87869 85357 72293 71737 62064 86874 85189 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43946000 15822 2863 14991 30105;30106 24127 24127 1 9606 Homo sapiens 0.03031715602787699 LFLEFER Unmodified 952.50182 0.5018177 708 A0A024RC67;O43663-3;O43663-2;O43663-4;O43663;H0YL53 PRC1 Protein regulator of cytokinesis 1 yes no 0 0 0 5 0 1 61.347 61.398 2 0.011694 18500 20230619_1885_Aki_TMTPro18x_K_F5 116.3 0 128980 117320 119600 135920 132260 147760 140380 149510 154070 146580 147540 134730 151630 129280 145170 163460 144750 166460 119270 107530 122570 135910 136630 148570 141530 152500 155940 147940 151800 137230 154320 135370 147820 163820 138650 157990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79160000 15823 708 14992 30107 24128 24128 1 9606 Homo sapiens 0.023666863858124998 LFLELEPQVR Unmodified 1242.6972 0.69722304 2750 Q13098-7;Q13098;Q13098-5;C9JFE4;A8K070;A0A096LPJ3;A0A096LP07;B4DND6;Q13098-6 GPS1 COP9 signalosome complex subunit 1 yes no 0 0 0 7 0 1 62.485 62.521 2 0.017782 18940 20230619_1887_Aki_TMTPro18x_K_F7 91.087 58.866 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15824 2750 14993 30108 24129 24129 1 9606 Homo sapiens 0.08558232119980858 LFLLPHK Unmodified 866.53781 0.53780928 315 A0A024R4Z6;Q08945;E9PMD4 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 5.5 0.5 1 1 55.479 55.549 3 0.0061129 16066 20230619_1885_Aki_TMTPro18x_K_F5 102.98 69.751 623310 479550 493590 485950 539830 733050 575360 600560 759690 166690 153360 106890 129170 102320 342710 152980 157670 96368 575150 439290 513010 493700 559790 719160 583360 610880 737340 191130 184960 111650 142850 108370 333450 150380 152220 92356 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 414090000 15825 315 14994 30109;30110 24130;24131 24130 2 9606 Homo sapiens 0.09920188353316917 LFLPEGPCDHTVVK Unmodified 1610.8127 0.81266351 1304 Q15477;A0A8V8TLC0;A0A1U9X8J0;A0A1U9X8J1;A0A1U9X8J2;A0A1U9X8J6;Q96BC0;O76046;Q9NPK3;A0A8V8TL97;H7C4L3;H7C5N0;A0A8V8TLA2;B4E0N1;B4DM01;A0A8V8TN04;A0A1U9X8I9;B4DSY1;Q59F56;A0A024RCU1;A0A8V8TLR3 SKIV2L;SKI2W Helicase SKI2W yes no 0 0 0 7 0 1 54.471 54.535 3 1.0107E-11 15578 20230619_1887_Aki_TMTPro18x_K_F7 176.89 159.4 74669 65222 65787 83956 70668 86063 89203 84196 96880 90487 87382 80601 86190 78176 85597 100740 89270 101500 69005 59851 67775 83244 73593 86798 89070 86332 97872 90832 90020 82243 88018 81910 87345 100870 85462 96354 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128940000 15826 1304 14995 30111 24132 24132 1 9606 Homo sapiens 0.03168968188629151 LFLVNNK Unmodified 846.49634 0.49633839 1237 A0A140VK83;Q15435;Q15435-3;C9J177;Q15435-2;C9JRC4;B5MBZ8;C9JD73;Q15435-5;Q15435-4;H7C003 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 0 4 0 1 55.673 55.682 2 0.015136 16512 20230619_1883_Aki_TMTPro18x_K_F4 111.69 76.582 127630 115940 116820 132920 134740 164100 156090 151600 202240 105460 102820 93572 103590 88583 146750 116790 119530 110880 118010 106260 119980 133260 139320 163250 157440 154500 199140 108900 110240 95477 107790 93038 146790 116670 114570 105410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68263000 15827 1237 14996 30112 24133 24133 1 9606 Homo sapiens 0.06695007593987157 LFLVQLQEK Unmodified 1116.6543 0.6542956 416 B2R6U8;A0A024R6W2;O43809;H3BND3 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 0 3 0 1 62.496 62.526 3 0.083664 19454 20230619_1882_Aki_TMTPro18x_K_F3 50.805 32.074 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15828 416 14997 30113 24134 24134 1 9606 Homo sapiens 0.10063462062566941 LFMAQALQEYNN Unmodified 1440.6708 0.6707503 2400 Q5BKY2;Q6IB98;Q53HR0;Q53HG0;B3KS98;O15372 EIF3H;EIF3S3 Eukaryotic translation initiation factor 3 subunit H yes no 0 0 0 7.5 0.5 1 1 64.471 64.496 2 0.0022246 19862 20230619_1887_Aki_TMTPro18x_K_F7 92.439 82.208 152440 120420 135220 162270 141950 154360 164600 163640 147910 194150 157240 160940 194590 136110 168500 208760 182550 172020 140800 110600 139060 160290 147470 156890 164170 167350 152320 193430 162580 164060 195980 145180 172790 206430 174450 163810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 631280000 15829 2400 14998 30114;30115 24135;24136 24135 2 9606 Homo sapiens -0.03195824833642291 LFMLLLEK Unmodified 1005.5933 0.59327524 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;F5GWI0;B7Z859 DDB1 DNA damage-binding protein 1 yes no 0 0 0 4.5 0.5 1 1 66.118 66.146 2 0.011631 20878 20230619_1883_Aki_TMTPro18x_K_F4 96.492 47.93 12327 6497.6 7831.2 7200.2 7407 9460.1 7352.8 8136.4 15810 9701.2 7916.4 7818.9 7952.8 8712.2 11561 9490.1 8283.2 8267.5 11338 5967.7 8317.8 7247.4 7767.5 9362.8 7674.2 8439.7 15297 9682.9 8499.3 8052.1 8301.5 8989.8 11501 9464.4 7956.9 7865.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8791800 15830 1710 14999 30116;30117 24137 24137 1 9606 Homo sapiens 0.09070233758791346 LFNDDNTIPFIIR Unmodified 1576.8249 0.82494275 2378 B3KPM8;Q8N5C6 SRBD1 S1 RNA-binding domain-containing protein 1 yes no 0 0 0 8 0 1 64.166 64.187 2 0.00037693 19618 20230619_1888_Aki_TMTPro18x_K_F8 123.67 96.19 21658 17352 21380 23298 18444 22572 22294 23277 31507 30097 29755 25961 34679 26005 30020 36122 31023 32826 20022 15935 21712 23028 19528 22889 22545 23910 31509 29935 30796 26572 34992 27376 30698 35932 29685 31207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24955000 15831 2378 15000 30118 24138 24138 1 9606 Homo sapiens 0.05960327923367004 LFNDSSPVVLEESWDALNAITK Unmodified 2447.222 0.22202061 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 7 0 1 66.89 66.913 3 3.1679E-17 20874 20230619_1887_Aki_TMTPro18x_K_F7 159.74 144.49 14610 10198 11582 11136 11541 11083 13839 11301 10964 15735 15521 16464 17093 14158 14919 17283 15376 16754 13474 9352 12012 11177 12037 11226 13732 11656 11536 15676 15787 16598 17286 14846 15248 17282 14717 15913 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27634000 15832 2863 15001 30119 24139 24139 1 9606 Homo sapiens 0.05629848042008234 LFNEHIEALTK Unmodified 1313.698 0.69795133 1699 A0A7P0T8N8;O14776-2;O14776;G3V220 TCERG1 Transcription elongation regulator 1 yes no 0 0 0 7 0.816 1 1 1 53.968 54.04 3 0.00062422 15337 20230619_1887_Aki_TMTPro18x_K_F7 94.507 64.733 272600 204800 254080 286690 260340 313150 288770 290370 323560 325420 326830 346430 403430 323650 324010 391430 341390 397360 251790 188220 259970 283030 270950 313990 290640 299180 327950 327670 338620 350010 405380 338290 332220 392400 326860 377140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1262000000 15833 1699 15002 30120;30121;30122 24140 24140 1 9606 Homo sapiens 0.05365026769027281 LFNEVQEK Unmodified 1005.5131 0.51311067 4491 Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 yes no 0 0 0 4.5 0.5 1 1 51.841 51.915 2 8.3557E-06 14886 20230619_1883_Aki_TMTPro18x_K_F4 149.57 86.154 43007 30632 40039 39109 39693 38079 41075 42117 54336 56024 53756 55152 56288 46722 45036 72347 69212 60782 39713 28129 40898 38800 41278 38696 41758 43114 54608 55842 55283 55769 56858 49815 47477 71555 65929 57884 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49966000 15834 4491 15003 30123;30124 24141;24142 24141 2 9606 Homo sapiens 0.010574636892897615 LFNQINIS Unmodified 947.50763 0.50763136 476 A0A024R7W9;Q92905 COPS5 COP9 signalosome complex subunit 5 yes no 0 0 0 1 0 1 63.011 63.011 2 0.033904 19705 20230619_1880_Aki_TMTPro18x_K_F1 76.592 54.821 27211 21190 24176 26559 22650 28956 26580 27783 32294 24626 26315 21137 25708 20171 27135 25976 25119 24176 25130 19448 24807 26411 23800 29060 26752 28377 32309 24967 27225 21613 26313 21155 27450 25915 24047 22985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98180000 15835 476 15004 30125 24143 24143 1 9606 Homo sapiens 0.031777848974684275 LFNTAVCESK Unmodified 1167.5594 0.55940893 2297 Q9BXJ9;B2RBE5;A0A8V8TQ34;B4E2T6 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 7.5 0.5 1 1 52.502 52.576 3 0.00049207 14644 20230619_1888_Aki_TMTPro18x_K_F8 102.53 66.106 112800 101910 115200 109560 93609 114680 111330 104100 128390 128210 106010 96259 134360 110430 96380 158610 128990 113580 104390 93346 116470 110150 99515 115360 111770 107740 129040 127360 110960 99763 134450 115970 100810 155910 123000 108410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 405150000 15836 2297 15005 30126;30127 24144 24144 1 9606 Homo sapiens -0.017668394709517088 LFPDTPLALDANK Unmodified 1413.7504 0.75038083 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;B4DDF3 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 7 0.707 1 2 1 62.639 62.676 2;3 7.1387E-05 19021 20230619_1887_Aki_TMTPro18x_K_F7 140.07 111.33 279550 210450 299010 322070 302890 373510 323770 297460 321730 315030 356540 305180 340580 295050 339220 395190 346860 345110 258510 193610 302380 316530 315050 371810 325240 309730 329230 317250 363200 310320 348060 309900 345710 392560 331780 328330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1923099999.9999998 15837 3823 15006 30128;30129;30130;30131 24145;24146 24146 2 9606 Homo sapiens 0.06005565111991018 LFPDTPLALDANKK Unmodified 1541.8453 0.84534384 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;B4DDF3 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 1 1.67 0.471 1 2 59.623 59.631 3;4 4.4393E-05 18525 20230619_1881_Aki_TMTPro18x_K_F2 107.65 92.106 158860 134060 145240 150710 133150 160480 146110 156310 162620 175170 169270 159140 183670 153790 161760 186450 159250 162690 146820 122880 148530 151010 139760 161450 147170 160440 165110 175520 173920 162160 185910 160540 164880 185460 152420 154770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 430600000 15838 3823 15007 30132;30133;30134 24147;24148 24148 2 9606 Homo sapiens 0.09609498583176901 LFPGSPAIYK Unmodified 1091.6015 0.60153174 3613 P49792;A0A8V8TLA0;A0A8V8TL79;A6NKT7;J3KNE0;Q7Z3J3;A0A8Q3SIN4;B4DYH0;F8VYC4;A0A286YES2;Q99666;O14715;P0DJD1;P0DJD0;A0A8Q3SII4;A0A8Q3SII5;J3KQ37;V9HWE4;D3DX73;F8W705;Q99666-2;H0YBN8;A0A8Q3SIQ7;C9J1W9;C9J6W1;Q7Z3J3-2;C9JF75 RANBP2;RGPD3;RGPD4;RGPD1;RGPD5;RGPD8;RGPD2;HEL161;hCG_1994636;RGPD6 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 1 yes no 0 0 0 4 0 1 59.43 59.432 3 0.0034939 18109 20230619_1883_Aki_TMTPro18x_K_F4 73.233 34.877 37407 31069 39049 41538 36805 48607 41659 41040 47847 39227 33664 34564 32841 35156 43400 40753 41916 40827 34605 28527 39523 41168 38601 48412 41913 42404 47817 39628 35206 35323 34106 36514 43849 40879 40111 38781 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71514000 15839 3613 15008 30135 24149 24149 1 9606 Homo sapiens 0.0593950399975256 LFPHVTPK Unmodified 937.53854 0.53853756 624 A0A2R8YFI2;A0A2R8YEA4;A0A2R8Y5H3;A0A2R8Y7Q9;A0A2R8YEK8;A0A2R8YE18;A0A2R8Y5S9;A0A024RAJ5;A0A2R8Y7C5;Q9Y5P4-2;Q9Y5P4;Q9Y5P4-3;A0A2U3TZL3;A0A2R8YE59;A0A2R8YFA1 COL4A3BP Collagen type IV alpha-3-binding protein yes no 0 0 0 4 0 1 47.098 47.14 3 0.07209 12709 20230619_1883_Aki_TMTPro18x_K_F4 45.081 24.799 72782 59481 60361 55584 52850 66824 64075 67842 85630 72653 77172 84113 82706 69533 76354 86308 81097 82048 67204 54440 62216 56671 55929 66761 64636 69345 85634 73537 79862 84370 83934 73079 78071 86201 77553 77972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25620000 15840 624 15009 30136 24150 24150 1 9606 Homo sapiens 0.06726983002386078 LFPLIQAMHPTLAGK Unmodified 1635.9171 0.917069 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;Q3ZCS4;Q9H361;Q5VX58;Q2VIP3;H0YAS6;H0YB75 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 yes no 0 0 0 7 0 1 62.584 62.62 4 4.557E-14 19003 20230619_1887_Aki_TMTPro18x_K_F7 148.7 117.83 90441 75614 83244 99060 70999 93288 89172 89115 92514 121840 104330 113180 127280 93818 87297 129620 122330 140100 83585 69411 85089 98008 75329 94639 88999 92222 94708 121060 107510 114590 127200 99412 91645 130120 116830 132890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 333260000 15841 566 15010 30137 24151 24151 1 9606 Homo sapiens 0.12454714736031747 LFPLIQTMHSNLAGK Oxidation (M) 1684.8971 0.89706184 1667 Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;H0Y5F5;H0YEU6;Q59GZ7;Q53GL4;A0A7I2V4V6;H0Y6X6 PABPC4 Polyadenylate-binding protein 4;Polyadenylate-binding protein yes no 0 1 0 5 0 1 57.002 57.064 3 0.00050566 16690 20230619_1885_Aki_TMTPro18x_K_F5 82.069 68.95 31233 33435 35574 40733 35306 38026 38217 45614 47936 42801 43065 42449 41711 35451 39034 42253 42460 45310 28969 30644 35803 40508 36765 38835 38687 45981 48080 43389 44348 42875 42490 37167 39947 42514 40612 42992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145330000 15842 1667 15011 30138 24152 24152 1086 1 9606 Homo sapiens 0.08200919005435026 LFPLNQQDVPDK Unmodified 1412.73 0.72997974 3882 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes yes 0 0 0 6.5 0.5 1 1 58.985 59.043 3 4.8103E-05 17713 20230619_1886_Aki_TMTPro18x_K_F6 117.98 93.184 165560 142380 150800 176200 152850 195410 195390 186930 206530 199760 199920 196470 215760 193630 197400 223240 216540 229040 153020 130610 154660 175390 159970 195880 194850 191920 209510 201130 206120 199560 218920 201370 202260 224120 207090 217430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 343230000 15843 3882 15012 30139;30140 24153;24154 24153 2 9606 Homo sapiens 0.04012394452161061 LFPNADSK Unmodified 890.44978 0.44978213 2491 B4DHN0;Q1HBJ4;P28482;Q499G7 MAPK1 Mitogen-activated protein kinase;Mitogen-activated protein kinase 1 yes no 0 0 0 7 0 1 49.947 50.028 2 0.027538 13604 20230619_1887_Aki_TMTPro18x_K_F7 82.279 48.482 158590 122380 152540 159060 159540 170400 163980 150690 192020 196450 211110 193590 206580 180020 201290 197730 236740 190020 146550 112370 155590 157750 165280 171020 165960 156580 194830 196040 215390 196230 210780 187060 206690 198030 225850 180730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111990000 15844 2491 15013 30141 24155 24155 1 9606 Homo sapiens 0.00017522972052574914 LFPPDDSPLPVSSR Unmodified 1525.7777 0.77765821 3797 Q5T760;Q05519-2;Q05519;Q05BU6;Q6PJY9;Q6PKC9;Q6PJB9;B4DWT1;B4DTC1 SRSF11;SFRS11 Serine/arginine-rich splicing factor 11 yes no 0 0 0 6 0 1 58.523 58.588 3 7.0483E-07 17491 20230619_1886_Aki_TMTPro18x_K_F6 131.35 87.149 52617 40193 51366 46984 57357 50589 52821 53450 76416 52871 56084 57650 53448 48468 63827 66094 56986 61496 48624 36866 52326 46968 58927 50991 54246 54389 75634 53655 58414 58023 55153 51205 64360 65872 54621 58441 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37068000 15845 3797 15014 30142 24156 24156 1 9606 Homo sapiens 0.03580048652361256 LFQCLLHR Unmodified 1085.5804 0.58041915 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 6 0.816 1 1 1 53.987 54.064 3 3.92E-21 15469 20230619_1885_Aki_TMTPro18x_K_F5 194.25 130.77 120690 105160 104830 98967 116940 150090 127780 127460 155840 40938 28553 24576 31664 22480 69607 34878 33342 19535 111520 96229 107990 101210 121040 147350 128970 129420 151750 45742 35491 25709 34027 23925 67913 34109 32156 18767 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1052699999.9999999 15846 3444 15015 30143;30144;30145 24157;24158;24159 24157 3 9606 Homo sapiens 0.04105215419235719 LFQECCPHSTDR Unmodified 1548.6449 0.64494625 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 4.75 1.48 1 1 1 1 39.206 39.269 3 2.4511E-24 9215 20230619_1883_Aki_TMTPro18x_K_F4 255.54 233.76 281270 261940 299790 307870 324220 362230 317200 331250 248510 327110 299180 315280 317540 242080 246750 327160 364390 378160 260450 240100 303400 307900 334410 361480 318340 340370 259600 330180 305480 318050 320050 256880 259090 329960 347600 358590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 957280000 15847 1865 15016 30146;30147;30148;30149 24160;24161;24162 24161 3 9606 Homo sapiens -0.1074304234759893 LFQEDDEIPLYLK Unmodified 1621.8239 0.8239397 2854 Q496I0;D6RIE3;D6RGV5;H0UI06;P14406 COX7A2 Cytochrome c oxidase subunit 7A2, mitochondrial yes no 0 0 0 4.5 0.5 1 1 63.867 63.893 3 2.2868E-05 19697 20230619_1885_Aki_TMTPro18x_K_F5 117.79 97.954 107600 111630 123100 184570 159740 208890 183120 203960 206560 98345 162550 152300 183400 146710 179020 153620 171750 175580 99783 102690 124770 180500 163860 209030 183960 205880 206880 106880 169740 152230 186250 151920 181570 155590 164430 166520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1003099999.9999999 15848 2854 15017 30150;30151 24163;24164 24164 2 9606 Homo sapiens 0.03790068763805721 LFQLPTPPLSR Unmodified 1267.7289 0.72885752 1848 A0A8V8TQL1;A0A8V8TQ23;B3KN25;A1PL14;A0A8V8TRF3;Q9Y6K0 CEPT1 Choline/ethanolaminephosphotransferase 1 yes no 0 0 0 6 0 1 62.426 62.477 2 5.7579E-17 19210 20230619_1886_Aki_TMTPro18x_K_F6 188.87 126.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15849 1848 15018 30152 24165 24165 1 9606 Homo sapiens 0.10570224873913503 LFQPFGK Unmodified 835.45922 0.4592246 2068 D6W5H1;A8K583;Q14966-4;Q14966-3;Q14966;B4DF54;Q14966-2;Q14966-6;B4E187 ZNF638 Zinc finger protein 638 yes no 0 0 0 4.5 0.5 1 1 59.498 59.527 2 0.02381 17711 20230619_1885_Aki_TMTPro18x_K_F5 100.07 42.603 54620 46255 53684 58008 50472 56617 55924 55547 63829 62203 63625 61470 69323 60915 57493 74853 68046 74552 50509 42440 54588 57598 52841 57335 56333 57012 64581 62498 65514 62452 70031 63586 59353 74926 65049 70789 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30255000 15850 2068 15019 30153;30154 24166 24166 1 9606 Homo sapiens 0.03491336048239191 LFQPNLNMDR Unmodified 1246.6128 0.61284149 634 A0A024RAV0;P54687-4;P54687;P54687-5;F5H2F2;A0A087WYF2 BCAT1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 0 0 1 0 1 55.228 55.228 2 1.6221E-09 16494 20230619_1880_Aki_TMTPro18x_K_F1 205.12 155.76 161980 141190 140760 150930 102420 152280 154070 154690 179430 143860 124440 125790 129510 112810 163710 149640 140490 130150 149680 129340 144300 151710 111200 153890 153130 157590 179070 145480 130590 128110 133670 118720 164510 148750 134580 123860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308320000 15851 634 15020 30155 24167 24167 1 9606 Homo sapiens -0.0006004196843605314 LFQQFGLTK Unmodified 1080.5968 0.59678072 1950 A4L733;Q13087-2;Q13087;B3KQU2;Q4TT66;H0Y4J5;B3KWF3 PDIA2 Protein disulfide-isomerase A2 yes no 0 0 0 5 0 1 62.091 62.139 3 0.039431 18886 20230619_1885_Aki_TMTPro18x_K_F5 52.49 32.831 73274 59561 61326 72962 63496 76568 67010 80274 92683 58368 69735 69719 65914 62248 75504 73301 69984 74288 67660 54643 63396 72628 66007 77213 68176 81143 91919 60563 72480 70061 67898 65004 76295 73551 67043 70533 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63474000 15852 1950 15021 30156 24168 24168 1 9606 Homo sapiens 0.05970619856975645 LFQQIYSDGSDEVK Unmodified 1627.773 0.77296676 2079 A8K5T7;Q9Y2Z0;B4DYC6;Q9Y2Z0-2;A8K7W3 SUGT1 Suppressor of G2 allele of SKP1 homolog yes no 0 0 0 4.5 0.5 1 1 61.133 61.16 3 6.5873E-07 18792 20230619_1883_Aki_TMTPro18x_K_F4 132.31 120.14 78915 70343 71545 84167 68268 85724 80772 85089 93391 91418 85457 83532 98425 80920 81177 101980 93428 94913 72955 64498 73331 83882 71617 86534 81123 87133 94143 91819 88596 85100 99216 84686 83641 101690 89283 90218 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 288440000 15853 2079 15022 30157;30158 24169;24170 24169 2 9606 Homo sapiens -0.01580880281062491 LFQSNDPTLR Unmodified 1189.6091 0.60913632 4753 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 0 6.5 0.5 1 1 49.92 49.999 2 4.9021E-10 13549 20230619_1887_Aki_TMTPro18x_K_F7 214.54 141.22 119990 96560 109210 123410 116070 146770 139600 124920 160370 158070 151840 155950 170370 137660 138520 185970 164980 162350 110850 88629 112070 122690 120830 146090 139970 130050 161900 157950 157000 157820 171750 145160 143140 184650 157570 154460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 211120000 15854 4753 15023 30159;30160 24171 24171 1 9606 Homo sapiens 0.02191611529360671 LFQSNDPTLRR Unmodified 1345.7102 0.71024735 4753 Q9Y678 COPG1 Coatomer subunit gamma-1 yes yes 0 0 1 3 0 1 42.864 42.929 3 4.9467E-12 10871 20230619_1882_Aki_TMTPro18x_K_F3 174.23 100.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15855 4753 15024 30161 24172 24172 1 9606 Homo sapiens 0.05122063232056462 LFQSNDQTLR Unmodified 1220.6149 0.61494998 1219 A0A140VK12;Q9UBF2;Q9H9B7;Q9UBF2-2 COPG2 Coatomer subunit gamma-2;Coatomer subunit gamma yes no 0 0 0 7 0 1 47.605 47.693 2 5.3733E-42 12519 20230619_1887_Aki_TMTPro18x_K_F7 262.63 173.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15856 1219 15025 30162 24173 24173 1 9606 Homo sapiens 0.013467100410252897 LFQTAITR Unmodified 948.53927 0.53926584 513 A0A024R8D4;Q9Y399 MRPS2 28S ribosomal protein S2, mitochondrial yes no 0 0 0 4 0.816 1 1 1 50.941 51 2 0.01036 14461 20230619_1883_Aki_TMTPro18x_K_F4 98.582 62.026 231950 204640 228550 249530 235630 308080 272650 271550 340670 247550 230330 216200 254060 207030 258100 282540 273950 253210 214560 187680 232770 249040 245660 306110 274770 279260 338580 250750 242520 220780 258760 217890 263390 281000 261820 240890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137360000 15857 513 15026 30163;30164;30165 24174 24174 1 9606 Homo sapiens 0.06293777651410437 LFSASEFEDPLVGEDTER Unmodified 2039.9324 0.93238053 3562 Q6IAX1;P37268-5;P37268;E9PNM1;B4DND3;A0A1W2PQ47;B7Z9R8;P37268-3;P37268-2;P37268-4;B4DTK0 FDFT1 Squalene synthase yes no 0 0 0 1 0 1 63.362 63.362 3 1.4264E-09 19857 20230619_1880_Aki_TMTPro18x_K_F1 131.48 127.24 20801 18187 21928 21553 16112 21838 17691 21802 21844 24593 25707 19987 23540 22962 21722 29660 20652 25409 19251 16676 22092 21501 17275 22053 17905 22338 22181 24564 26057 20636 24023 23927 22110 29436 19803 24161 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123890000 15858 3562 15027 30166 24175 24175 1 9606 Homo sapiens -0.04598836514401228 LFSEGLFSAK Unmodified 1097.5757 0.57571092 495 Q14C86-6;Q14C86;Q14C86-2;Q14C86-5;Q14C86-4;A0A024R8A2;A0A024R862;F8W9S7;Q14C86-3;A0A024R875;B4DK42;C9IZ08;B4DGD8;H0Y7I9;H0Y4E7;B0QZ65 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 0 0 0 2 0 1 62.542 62.551 2 0.0012523 19773 20230619_1881_Aki_TMTPro18x_K_F2 125.97 72.001 54418 49775 49666 52199 46721 52819 46678 50608 60631 62863 55817 61714 73813 57857 60323 78385 70362 80239 50320 45581 50811 52551 48809 53340 47528 52176 60847 62844 58315 62577 74101 60927 62234 78481 67293 76155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19478000 15859 495 15028 30167 24176 24176 1 9606 Homo sapiens 0.03082609757461796 LFSEYHEK Unmodified 1051.4975 0.4974606 4466 Q9BXW7-2;Q9BXW7 CECR5 Cat eye syndrome critical region protein 5 yes no 0 0 0 5 0 1 45.229 45.307 3 0.00055439 11763 20230619_1885_Aki_TMTPro18x_K_F5 120.87 85.454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15860 4466 15029 30168 24177 24177 1 9606 Homo sapiens -0.026228228277886956 LFSLPAQPLWNNR Unmodified 1554.8307 0.83069683 577 A0A024R9J0;O60216;A0A8I5KWV3 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 0 0 7 0 1 63.346 63.379 3 0.00037813 19377 20230619_1887_Aki_TMTPro18x_K_F7 93.614 68.76 51852 46091 53244 52093 47180 55506 57010 53375 59770 59151 53308 55205 63598 48369 56287 60515 60502 60632 47983 42239 53879 52183 49765 55827 57003 54841 60506 59351 55469 55981 64201 50796 57620 60613 57848 57587 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97554000 15861 577 15030 30169 24178 24178 1 9606 Homo sapiens 0.07547471225689151 LFSQETVMK Unmodified 1081.5478 0.54778161 4555 Q9HDC9 APMAP Adipocyte plasma membrane-associated protein yes yes 0 0 0 8 0 1 55.172 55.238 2 2.1314E-07 15815 20230619_1888_Aki_TMTPro18x_K_F8 174.02 116.46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15862 4555 15031 30170 24179 24179 1 9606 Homo sapiens 0.010269635057284177 LFSQFCNK Unmodified 1042.4906 0.49060109 2618 B4DX46;Q6GMV2;B4DUT1 SMYD5 SET and MYND domain-containing protein 5 yes no 0 0 0 4 0 1 56.555 56.561 3 0.034849 16892 20230619_1883_Aki_TMTPro18x_K_F4 61.962 49.737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15863 2618 15032 30171 24180 24180 1 9606 Homo sapiens -0.028944589799721143 LFSSQYGK Unmodified 928.46543 0.46543219 3613 P49792;A0A8V8TLN4;A0A8V8TMN6;A6NKT7;J3KNE0 RANBP2;RGPD3 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3 yes no 0 0 0 3 0 1 51.078 51.149 2 0.0010643 14644 20230619_1882_Aki_TMTPro18x_K_F3 163.9 101.18 129000 109590 121540 123320 140370 154340 135460 132760 159610 152880 164530 133220 161860 129710 136390 166640 178980 155650 119260 100450 124380 123850 144230 153250 137630 137630 161430 152890 168210 136170 164050 135910 141650 166160 170680 148040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85987000 15864 3613 15033 30172 24181 24181 1 9606 Homo sapiens -0.0016619051090174253 LFSSVTFETVEESK Unmodified 1601.7825 0.78246882 2082 A8K5Y7;Q9HAV4;B3KPQ5;B3KNC6;Q9H8N6 XPO5 Exportin-5 yes no 0 0 0 5.5 0.5 1 1 62.747 62.796 3 0.00051184 19387 20230619_1886_Aki_TMTPro18x_K_F6 89.26 72.181 133810 111800 140450 140570 108930 135030 135440 140830 146680 161880 164130 174470 179900 159390 161570 175020 176520 204370 123800 102580 141660 139560 116450 137060 135470 144050 149570 162820 168340 175990 182270 165760 165530 177230 168940 193690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 339580000 15865 2082 15034 30173;30174 24182 24182 1 9606 Homo sapiens 0.005648880044645921 LFTAESLIGLK Unmodified 1190.6911 0.69107503 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 0 2.5 0.5 1 1 63.999 64.03 3 0.00018963 20145 20230619_1882_Aki_TMTPro18x_K_F3 112.13 76.186 56506 44755 53982 46858 53167 59634 50637 46515 62514 64286 67683 65476 91815 63028 45017 82545 79200 99593 52220 41004 54983 47347 55257 59057 51590 48907 63268 64079 70171 66372 90638 66237 48698 83456 75589 94338 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 302030000 15866 2181 15035 30175;30176 24183;24184 24184 2 9606 Homo sapiens 0.10335713888457576 LFTAHNNMTNYATVWASK Oxidation (M) 2083.9786 0.97855964 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 1 0 5.5 0.5 1 1 55.719 55.789 3 1.3563E-14 16129 20230619_1885_Aki_TMTPro18x_K_F5 166.9 144.43 101560 88752 102320 105890 120980 118400 113750 123230 115030 116560 116260 108290 129430 103920 110020 124620 115740 123010 93952 81381 104160 105720 123850 118940 115200 125340 117240 117880 119740 110220 130710 108480 112610 124770 110740 116830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119110000 15867 3811 15036 30177;30178 24185 24185 2490 1 9606 Homo sapiens -0.020070500932433788 LFTAHNNMTNYATVWASK Unmodified 2067.9836 0.98364501 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 5.5 0.5 1 1 59.609 59.667 3 5.1671E-14 17960 20230619_1886_Aki_TMTPro18x_K_F6 160.97 136.93 58397 54127 66170 66313 52504 69877 66811 69037 74233 82799 67557 62920 73868 62584 67561 78679 78930 67842 54102 49635 66383 66028 56075 70345 66794 70936 75014 82326 69878 64769 74905 65427 69495 78173 75333 64592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194670000 15868 3811 15036 30179;30180 24186 24186 1 9606 Homo sapiens -0.007627462306118105 LFTEEELAR Unmodified 1106.5608 0.56078914 4687 Q9UMX5 NENF Neudesin yes yes 0 0 0 2.5 0.5 1 1 53.169 53.215 2 2.5253E-17 15854 20230619_1881_Aki_TMTPro18x_K_F2 255.1 210.71 244080 199140 214410 262580 202620 219280 223320 231820 241380 258170 270020 267710 272570 246840 261110 315560 280030 295980 225460 182840 220360 259340 211990 225320 224660 236760 246120 259740 275820 270760 277670 258840 267080 314750 267860 281270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 426750000 15869 4687 15037 30181;30182 24187 24187 1 9606 Homo sapiens 0.011771178894605328 LFTEHVAEK Unmodified 1072.5553 0.55530983 2602 B4DVQ4;Q86Y37-4;Q86Y37;Q86Y37-2 CACUL1 CDK2-associated and cullin domain-containing protein 1 yes no 0 0 0 5 0 1 45.295 45.373 3 0.00070295 11825 20230619_1885_Aki_TMTPro18x_K_F5 105.98 49.544 189500 104820 146880 143250 145940 146960 158280 148470 222300 112520 111100 104070 131620 100670 110180 134740 111250 97919 174540 96443 152680 141570 152110 148360 160760 150660 218070 115630 120050 106040 132640 105760 112600 132740 106340 93443 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74355000 15870 2602 15038 30183 24188 24188 1 9606 Homo sapiens 0.021934390976412033 LFTEVEGTCTGK Unmodified 1340.6282 0.62821678 2920 E9PIU7;H0YEE4;E9PKH3;P62487 POLR2G DNA-directed RNA polymerase II subunit RPB7 yes no 0 0 0 5 0.816 1 1 1 54.841 54.893 3 0.00013878 15984 20230619_1886_Aki_TMTPro18x_K_F6 106.01 85.545 56133 50501 49999 55426 55337 67128 59545 60431 79974 62124 59763 59165 69929 54728 58874 74275 71850 72961 51890 46266 51424 55732 57267 66837 60408 62233 79478 62653 62699 60080 70515 57661 60862 74200 68628 69309 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97110000 15871 2920 15039 30184;30185;30186 24189 24189 1 9606 Homo sapiens -0.02847219961904557 LFTFHADICTLPDTEK Unmodified 1906.9135 0.91349976 2776 CON__P02769 yes yes 0 0 0 7 0 1 61.139 61.178 3 8.027E-05 18306 20230619_1887_Aki_TMTPro18x_K_F7 94.461 79.691 + 37593 41589 45633 36442 57043 75501 61328 49495 66470 45879 47870 51039 50342 45128 50171 55914 56831 70642 34899 38009 45833 37767 58535 72777 61693 52263 66626 46791 50135 51392 51328 47331 51424 56812 54406 66889 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268790000 15872 2776 15040 30187 24190 24190 1 9606 Homo sapiens -0.0036804461913106934 LFTNFHR Unmodified 933.48209 0.48208531 3771 V9HWC5;Q00169;B4E1U1;Q6NUL6;I3L4H1 HEL-S-36;PITPNA Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 4.5 0.5 1 1 44.298 44.342 3 1.0425E-08 11367 20230619_1885_Aki_TMTPro18x_K_F5 164.89 0 80350 64850 79806 73155 73314 86967 83922 74636 101550 61289 55987 42576 51532 43738 68986 64447 60450 42981 74287 59451 80984 73411 77021 86609 84513 76765 100520 62190 59344 44196 53585 46158 69341 63251 57800 41115 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34985000 15873 3771 15041 30188;30189 24191;24192 24192 2 9606 Homo sapiens 0.012683551657119096 LFTNFSGADLLK Unmodified 1324.7027 0.70270235 123 F8VWL0;A0A024R120;Q12800-2;Q12800-3;Q12800-4;Q12800 TFCP2 Alpha-globin transcription factor CP2 yes no 0 0 0 2 0 1 63.677 63.685 3 0.0017844 20241 20230619_1881_Aki_TMTPro18x_K_F2 79.875 33.996 51018 36155 41945 47807 47494 51693 43366 46232 49169 42193 43759 48279 47457 40854 52402 47704 47137 50758 47066 33214 43473 47358 48809 51848 44162 47505 49546 43055 45365 48479 48552 42748 52883 48018 45176 48165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37360000 15874 123 15042 30190 24193 24193 1 9606 Homo sapiens 0.05333910911804196 LFTPDVIR Unmodified 959.54402 0.54401687 1317 A0A1W2PPH1;A0A1W2PQH3;P23368;A0A1W2PR68;A0A1W2PQT3;A0A1W2PQY8;A0A1W2PQ37;A0A1W2PQF8;P23368-2 ME2 NAD-dependent malic enzyme, mitochondrial yes no 0 0 0 1 0 1 56.342 56.342 2 2.4274E-05 16978 20230619_1880_Aki_TMTPro18x_K_F1 133.79 54.485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15875 1317 15043 30191 24194 24194 1 9606 Homo sapiens 0.06262661794175983 LFTPSPEIVK Unmodified 1129.6383 0.63831118 4270 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 8 0 1 58.9 58.941 3 0.0069843 17353 20230619_1888_Aki_TMTPro18x_K_F8 79.974 52.859 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15876 4270 15044 30192 24195 24195 1 9606 Homo sapiens 0.0786775582566861 LFTSDLQDK Unmodified 1065.5342 0.53424004 2519 B4DKV8;Q8NFH4;F8VTY2 NUP37 Nucleoporin Nup37 yes no 0 0 0 5.5 0.5 1 1 55.419 55.489 2 0.010257 16249 20230619_1886_Aki_TMTPro18x_K_F6 95.775 33.116 40700 30992 31175 42415 34683 38016 38456 38766 48968 44202 44462 53267 50206 48373 43582 64530 62179 72403 37545 28474 32580 41815 35889 38789 38874 39716 49109 44670 46138 53505 50812 50896 45580 64953 59384 68648 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52393000 15877 2519 15045 30193;30194 24196 24196 1 9606 Homo sapiens 0.004094289981367183 LFTSDLQDKNEYK Unmodified 1599.7781 0.77805214 2519 B4DKV8;Q8NFH4;F8VTY2 NUP37 Nucleoporin Nup37 yes no 0 0 1 7 0 1 53.612 53.679 3 0.0021789 15204 20230619_1887_Aki_TMTPro18x_K_F7 77.358 63.679 71519 61467 72033 80881 78055 82485 84051 84325 80085 89472 89567 71359 83069 63019 96379 75848 60278 58570 66156 56422 73275 80095 80699 83332 84301 86151 82241 89561 91086 73022 85507 65985 95667 75132 58010 55819 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39659000 15878 2519 15046 30195 24197 24197 1 9606 Homo sapiens 0.0021542358158512798 LFTVPWPVK Unmodified 1085.6274 0.62735256 1260 A0A1B0GVH5;A0A1B0GTC3;B3KU60;Q9C0B1;A0A1B0GUC3;A0A1B0GU26;A0A1B0GTC5;A0A1B0GV98;A0A1B0GTY1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes no 0 0 0 6 0 1 64.038 64.084 3 0.0007758 19962 20230619_1886_Aki_TMTPro18x_K_F6 103.56 76.448 77191 70197 83965 80588 71062 91306 80914 89853 91965 75540 72059 83561 81327 76434 78430 77646 83399 93982 71478 64335 84528 80709 75190 91457 81405 91489 92246 77377 75370 84186 82635 79134 80075 78931 79821 89053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123250000 15879 1260 15047 30196 24198 24198 1 9606 Homo sapiens 0.08796398242020587 LFVDTDADTR Unmodified 1151.5459 0.54586736 1357 A0A2R8Y653;Q9BZX2;Q9BZX2-2 UCK2 Uridine-cytidine kinase 2 yes no 0 0 0 1.5 0.5 1 1 50.282 50.308 2 0.0019943 14632 20230619_1881_Aki_TMTPro18x_K_F2 121.5 104.26 82548 66568 79171 76924 79192 87260 86865 86559 111610 75960 81624 67517 92243 62365 64378 97318 84242 80951 76297 61039 80692 77004 82506 87448 87892 88186 110990 77153 85485 68880 92404 66409 67233 96210 80387 77073 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125870000 15880 1357 15048 30197;30198 24199 24199 1 9606 Homo sapiens -0.02384373978543408 LFVGGIKEDTEEHHLR Unmodified 1878.9588 0.95881047 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28;A0A087WUI2;I6L957;A0A7I2V4N0;A0A7I2YQN4 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 1 5.14 1.3 1 4 4 3 1 1 53.327 53.387 3;5 4.4821E-34 11684 20230619_1885_Aki_TMTPro18x_K_F5 261.02 0 635710 516550 612100 643940 597830 637520 715250 635890 589790 664400 660330 509150 633660 400250 660590 456170 471790 337180 587620 473990 623760 639830 624650 645220 710540 650760 611130 664880 672260 520330 647500 420020 659650 451670 452290 322010 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 18340000000 15881 3491 15049 30199;30200;30201;30202;30203;30204;30205;30206;30207;30208;30209;30210;30211;30212 24200;24201;24202;24203;24204;24205 24201 6 9606 Homo sapiens 0.054489419582751 LFVGGLDWSTTQETLR Unmodified 1821.9261 0.92611336 1118 K7EQ55;K7EK33;A0A0S2Z569;Q96EP5-2;Q96EP5;K7EQ02;Q5IRN2 DAZAP1;DAZAP1/MEF2D fusion DAZ-associated protein 1 yes no 0 0 0 8 0 1 63.553 63.575 3 0.00026058 19347 20230619_1888_Aki_TMTPro18x_K_F8 87.566 76.295 84336 41046 65550 68597 84941 62359 86857 77599 40471 112140 85672 49095 89324 80326 91377 106290 72103 106780 77642 37890 68426 66918 86416 63938 86061 79122 46015 109430 85741 53892 91124 83266 91921 106360 69414 101290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1154200000 15882 1118 15050 30213 24206 24206 1 9606 Homo sapiens 0.04802734835402589 LFVGGLK Unmodified 732.45341 0.45341094 3836 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 4.2 0.98 3 3 3 1 56.233 56.273 2 0.0054462 16936 20230619_1882_Aki_TMTPro18x_K_F3 140.79 0 4824400 3672200 3711300 4699600 3451200 5364200 4405000 4437600 6855800 5742500 5334800 7156200 8272300 7888800 3658200 11429000 7454300 11181000 4450500 3371400 3866700 4667900 3651100 5348300 4460100 4633500 6785000 5783200 5679000 7231000 8141400 8295400 4055400 11388000 7121300 10609000 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 13985000000 15883 3836 15051 30214;30215;30216;30217;30218;30219;30220;30221;30222;30223 24207;24208;24209;24210;24211;24212;24213 24208 7 9606 Homo sapiens 0.0764823753655719 LFVGGLSFDTNEQSLEQVFSK Unmodified 2344.1587 0.15869207 3874 Q14011;Q53XX5;Q14011-2;K7EQR7;D6W5Y5;K7EPM4;K7EMY9;K7EJV1;K7ELT6;K7ER40;Q6ZR81;B4E2A3;K7EJV5;K7ELV6;K7ENX8;K7ENN6;K7EQL0;K7EIF7;K7EQX4 CIRBP Cold-inducible RNA-binding protein yes no 0 0 0 8 0 1 65.569 65.589 3 1.8511E-11 20191 20230619_1888_Aki_TMTPro18x_K_F8 125.12 112.82 6808.5 5018 6932.6 6726.6 4992.4 3823.9 5870.3 7108.2 7548.9 6590.8 5188.2 7473.4 7087.1 6345.2 7363.3 6731.9 5637.8 9275.1 6292.7 4609.8 6998.2 6619.7 5351.5 4166.6 5925.9 7020.8 7503.9 6712.5 5535.7 7499.1 7187.1 6605.6 7385.1 6902.6 5436.1 8769.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16992000 15884 3874 15052 30224 24214 24214 1 9606 Homo sapiens 0.04037907324709522 LFVGNLPADITEDEFK Unmodified 1806.904 0.90398093 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 5 0 1 64.036 64.082 4 0.031654 19781 20230619_1885_Aki_TMTPro18x_K_F5 52.823 44.094 26405 18223 21074 27250 22176 31978 25004 28457 32594 30862 34534 41421 39819 40466 27709 50454 49889 52715 24351 16767 21914 26817 23110 31864 25291 29375 32850 31395 35601 41553 39969 42266 29741 50594 47539 50034 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27871000 15885 1450 15053 30225 24215 24215 1 9606 Homo sapiens 0.03280510366994349 LFVGNLPADITEDEFKR Unmodified 1963.0051 0.005091963 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 1 6.5 0.5 1 1 62.071 62.115 3 2.7048E-18 18740 20230619_1887_Aki_TMTPro18x_K_F7 175.61 155.41 470290 466650 509370 510860 477560 512630 589370 531550 403830 506390 469320 321310 428840 310430 545050 334860 268640 241280 435750 427370 513760 512590 500730 518900 582160 541170 425000 507140 476120 334470 443670 322160 535780 331670 259510 230260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3556799999.9999995 15886 1450 15054 30226;30227 24216 24216 1 9606 Homo sapiens 0.0621096206969014 LFVGNLPPDITEEEMR Oxidation (M) 1874.9084 0.90841439 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;C9JYS8;C9IZL7;A0A0S2Z4E7;C9J4X2;A0A7I2YQK8 NONO Non-POU domain-containing octamer-binding protein yes no 0 1 0 4.33 1.25 1 1 1 61.76 61.788 3 0.0015731 19052 20230619_1882_Aki_TMTPro18x_K_F3 71.354 58.373 101660 80143 100590 111110 102020 113230 120000 115380 128030 91093 115050 92770 118370 92892 111670 116210 112550 117060 93968 73631 102370 109670 106330 114350 120190 117110 129290 93486 118660 94285 120330 97094 113740 116440 107710 111160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 447730000 15887 1112 15055 30228;30229;30230 24217;24218 24217 695 2 9606 Homo sapiens 0.00595651518278828 LFVGNLPPDITEEEMR Unmodified 1858.9135 0.91349976 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;C9JYS8;C9IZL7;A0A0S2Z4E7;C9J4X2;A0A7I2YQK8 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 3.8 0.748 2 2 1 62.55 62.573 2;3 4.2356000000000004E-33 19490 20230619_1882_Aki_TMTPro18x_K_F3 300.78 279.91 304260 262090 328990 355050 286000 384660 342480 341130 370860 363420 367120 385550 388070 338060 397650 406910 386160 435210 281620 240650 331740 351200 302450 385480 343040 352180 376100 366800 378000 388790 395890 353930 403630 409360 369930 412880 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 560450000 15888 1112 15055 30231;30232;30233;30234;30235 24219;24220;24221;24222 24219 4 9606 Homo sapiens 0.01839955380887659 LFVGNLPPDITEEEMRK Unmodified 1987.0085 0.0084627814 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;C9JYS8;C9IZL7;A0A0S2Z4E7;C9J4X2;A0A7I2YQK8 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 1 6 0 1 60.506 60.564 3 4.4809E-07 18351 20230619_1886_Aki_TMTPro18x_K_F6 115.8 103.17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15889 1112 15056 30236 24223 24223 1 9606 Homo sapiens 0.05443888852073542 LFVGNLPTDITEEDFKR Unmodified 1993.0157 0.015656649 2614 B4DWI8;Q8WXF1;A0A024RDP4;Q8WXF1-2;X6RDA4 PSPC1 Paraspeckle component 1 yes no 0 0 1 7.5 0.5 1 1 61.868 61.901 3 0.00031406 18694 20230619_1887_Aki_TMTPro18x_K_F7 80.361 54.803 152420 127120 141540 163870 121810 150650 156790 146450 146300 168170 163290 151160 172640 147870 178380 171590 148640 152490 140880 116670 144550 162270 129120 153210 155770 150560 150420 168240 167130 154160 176120 153880 179610 171030 142540 145030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 955500000 15890 2614 15057 30237;30238 24224 24224 1 9606 Homo sapiens 0.0588694472410225 LFVGSIPK Unmodified 859.51674 0.51673948 2265;1680;3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PEX7;B4DMD1;A0A6Q8PHG0;A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2V5Q6;A0A7I2YQV8;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 HNRNPR;HNRPR;DKFZp686A13234;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 4 0.816 1 1 1 57.77 57.801 2 0.0015417 17509 20230619_1882_Aki_TMTPro18x_K_F3 140.98 93.167 704840 598880 633030 684930 643720 754130 724310 730880 775850 798170 755650 771040 888300 753330 670730 1066600 569180 852580 651360 548980 649570 685690 670450 756830 727350 750020 787160 802240 781990 783960 891820 793920 682650 1053600 547530 811010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1799299999.9999998 15891 3254;1680;2265 15058 30239;30240;30241 24225;24226 24225 2 9606 Homo sapiens 0.08136178253801063 LFVINEVCEMK Unmodified 1380.6781 0.67814386 2639 B4E0B8;Q8TDN6;Q9NUW4;A0JLQ5 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog yes no 0 0 0 7.5 0.5 1 1 62.765 62.795 3 4.0178E-05 19098 20230619_1887_Aki_TMTPro18x_K_F7 110.84 87.233 227940 230070 259550 260760 210100 244510 272010 243360 283780 294130 223930 233920 329590 259390 231470 357800 301240 329280 211310 210760 260320 260710 223770 248520 271030 250170 286360 292760 237210 241170 328330 272080 241650 355960 287740 312950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 254180000 15892 2639 15059 30242;30243 24227;24228 24227 2 9606 Homo sapiens 0.0030319144241275353 LFVLTTK Unmodified 820.50584 0.50584045 4394 Q96RS6;Q96RS6-3;Q96RS6-2 NUDCD1 NudC domain-containing protein 1 yes no 0 0 0 4.5 0.5 1 1 60.054 60.082 2 0.0011832 17940 20230619_1885_Aki_TMTPro18x_K_F5 181.2 51.237 389080 339230 387900 379020 315490 373810 388420 344030 427470 359850 354130 303460 336220 272230 403840 386210 384480 348090 359910 310870 393020 379600 335590 377780 388640 354150 430140 361290 365860 309860 346870 287950 408280 384200 367800 331160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 269250000 15893 4394 15060 30244;30245 24229;24230 24230 2 9606 Homo sapiens 0.08840775879502871 LFVQDEK Unmodified 877.45453 0.45453316 2654 B4E357;Q5JPB8;Q53HL4;Q53GT4;G3V1D3;G3V180;Q9NY33-4;Q9NY33 DKFZp686O1117;DPP3 Dipeptidyl peptidase 3 yes no 0 0 0 5 0 1 50.376 50.452 2 0.015793 13953 20230619_1885_Aki_TMTPro18x_K_F5 110.81 27.193 138840 112600 127940 133680 134310 143990 138500 134610 165440 167430 185210 179720 191590 154840 162960 196200 206460 182100 128290 103270 130990 133420 139140 144650 140270 139070 167830 167840 189310 181110 193950 162740 168780 195620 196950 173190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48752000 15894 2654 15061 30246 24231 24231 1 9606 Homo sapiens 0.010904071148047478 LFVQDLATR Unmodified 1061.5869 0.58694431 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;B4DS27 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 1 0 1 55.875 55.875 2 1.0259E-06 16782 20230619_1880_Aki_TMTPro18x_K_F1 143.37 118.24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15895 2727 15062 30247 24232 24232 1 9606 Homo sapiens 0.058614318515992636 LFVQDLTTR Unmodified 1091.5975 0.597509 1036 O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;Q57Z91;O60282-2;A0A7I2V352;A0A7I2YQQ7;Q59GB8 KIF5C Kinesin heavy chain isoform 5C;Kinesin-like protein yes no 0 0 0 8 0 1 56.274 56.331 2 0.0014483 16291 20230619_1888_Aki_TMTPro18x_K_F8 120.31 91.144 92883 76126 82501 112590 70903 100180 101360 97134 110760 108530 110180 99316 124180 104960 95390 129970 111110 123700 85808 69983 84717 110450 75577 102090 100720 99802 112280 108820 113590 101530 124930 109420 98571 129750 106250 117510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156690000 15896 1036 15063 30248 24233 24233 1 9606 Homo sapiens 0.05537414506011373 LFVSDGVPGCLPVLAAAGR Unmodified 1898.0084 0.0084032019 2037 A8K492;P56192;B4E0E9;P56192-2;A0A024RBA2;F8VPL7;F8VS26;F8W0M7;F8W0S4;F8VZZ9;F5H2V6 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 0 0 3.5 0.5 1 1 63.844 63.863 3 2.3723E-07 20078 20230619_1882_Aki_TMTPro18x_K_F3 109.04 98.136 51173 40963 47937 46122 45164 52341 48773 49690 43721 57898 56873 53636 53448 55650 53495 62699 59093 59396 47287 37553 48911 46259 47236 52402 48850 51156 45416 57922 57574 54729 54729 57666 54758 62688 56487 56448 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 156080000 15897 2037 15064 30249;30250 24234;24235 24234 2 9606 Homo sapiens 0.09531933642733748 LFVSGACDASAK Unmodified 1224.5809 0.58087266 1179 B2R6K4;A0A140VJJ8;P62873;F6X3N5;A0A2L0WW42;P62873-2;A0A994J3T6;Q71UM6;B3KVK2 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes no 0 0 0 7.5 0.5 1 1 51.374 51.451 3 3.7252E-07 14218 20230619_1887_Aki_TMTPro18x_K_F7 119.05 98.209 565570 466610 499020 537640 517880 501090 558580 611310 590520 627780 690660 664880 716400 598480 593710 822410 702290 701370 522490 427810 512870 536920 537080 512320 562160 617220 603960 634430 704760 671620 724480 631200 613160 815400 670890 667450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1483699999.9999998 15898 1179 15065 30251;30252 24236;24237 24236 2 9606 Homo sapiens -0.022434544422367253 LFVTNDAATILR Unmodified 1332.7402 0.74015049 3621 Q53HU0;P50990;P50990-2;Q7Z759;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 1.5 0.5 1 1 61.282 61.287 2 8.054E-24 18986 20230619_1880_Aki_TMTPro18x_K_F1 256.38 209.91 521390 455800 502910 547610 486810 586880 528580 537070 596290 587930 541330 524520 579770 484350 599770 637920 579020 599860 482180 417980 512470 546000 508540 589270 532780 553470 601700 589600 559740 534170 591390 509140 608610 636340 554340 570080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4960300000 15899 3621 15066 30253;30254 24238;24239 24238 2 9606 Homo sapiens 0.08709002177397451 LFVVDHVIK Unmodified 1068.6332 0.63316622 2708 B7ZKS3;Q86UV5;Q86UV5-8;B7ZKR8;Q86UV5-2;A0A0A0MRS6;Q86UV5-5 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes no 0 0 0 2 0 1 55.038 55.059 3 4.5448E-05 16656 20230619_1881_Aki_TMTPro18x_K_F2 145.72 87.047 87307 76890 87275 91590 69252 80248 84056 87951 84929 105830 102110 103240 105310 90356 96825 117530 105850 129160 80769 70502 88412 91169 73769 82197 83995 89807 87256 105860 104110 104500 106980 95095 99231 118250 101350 122470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66707000 15900 2708 15067 30255 24240 24240 1 9606 Homo sapiens 0.10159496753703934 LFVVPADEAQAR Unmodified 1314.6932 0.6932003 104 A0A8V8TQH6;A0A024R0Q4;A0A8V8TPY8;A0A8V8TRD4;Q8IV08 PLD3 Phospholipase D3 yes no 0 0 0 4 0 1 54.78 54.792 2 0.00015018 16133 20230619_1883_Aki_TMTPro18x_K_F4 115.82 72.701 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15901 104 15068 30256 24241 24241 1 9606 Homo sapiens 0.04844142626257053 LFVYDLHAVK Unmodified 1203.6652 0.66519463 787 X6R5E5;A8K2S7;A0A024RE02;Q8NBM4;Q5JUH4;Q8NBM4-5 UBAC2;PHGDHL1 Ubiquitin-associated domain-containing protein 2 yes no 0 0 0 2 0 1 57.599 57.614 3 0.00031621 17657 20230619_1881_Aki_TMTPro18x_K_F2 112.13 79.909 35423 31602 38160 37151 35609 30075 40242 38999 45752 41948 37402 38498 40924 35940 32361 50883 49097 49602 32794 28971 38481 36996 37234 31188 40480 39313 45974 42131 38922 39169 41283 37947 34084 50759 46818 47124 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101400000 15902 787 15069 30257 24242 24242 1 9606 Homo sapiens 0.07150864436812299 LFYADHPFIFLVR Unmodified 1636.8766 0.87658439 346 P50454;A0A024R5K8;A8K259;B4DN87;E9PKH2;H0YEP8 SERPINH1 Serpin H1 yes no 0 0 0 6 0 1 63.339 63.388 3 0.0062569 19670 20230619_1886_Aki_TMTPro18x_K_F6 69.352 38.48 50551 45735 51780 57414 49095 59920 71818 73483 80279 58226 55501 54968 60976 53378 65011 68264 58611 62405 46783 41953 52518 57069 51852 60686 71328 73709 80242 59589 58373 55939 62267 55890 65704 68026 56166 59321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131360000 15903 346 15070 30258 24243 24243 1 9606 Homo sapiens 0.08362116407897702 LFYLALPPTVYEAVTK Unmodified 1824.0073 0.0073237944 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4;A0A8Q3WL93;A0A8Q3WLT0;A0A8Q3WL80;E7EM57;Q0PHS1;A0A8Q3WL83;E9PD92;A0A2H4QGB2;A0A2H4QGB6;A7IZZ3;A0A6G9IW12 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 4.5 0.5 1 1 66.12 66.147 3 2.3845E-08 20619 20230619_1885_Aki_TMTPro18x_K_F5 135.14 94.561 105500 85229 95258 100690 109740 125160 114800 122370 124550 141750 144790 153480 149780 139080 153270 145740 148830 179530 97470 78166 97879 100750 113030 124630 115800 125670 127240 142540 147920 154730 152930 144300 155510 148270 142660 170050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 299730000 15904 1464 15071 30259;30260 24244;24245 24245 2 9606 Homo sapiens 0.12828042545424978 LFYNFDK Unmodified 945.45962 0.45961853 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9;Q6LAI4 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 1 0 1 60.317 60.317 2 0.014775 18615 20230619_1880_Aki_TMTPro18x_K_F1 112.17 68.467 71478 59773 65703 64002 52094 70437 56531 59217 72121 81661 69260 69001 77181 69823 69757 87722 76314 77233 66058 54763 67010 64402 55455 70480 57271 61861 72561 80951 71538 70651 78204 72923 71527 87229 72960 73464 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28887000 15905 1853 15072 30261 24246 24246 1 9606 Homo sapiens -0.01529289022573721 LFYSTFATDDRK Unmodified 1462.7092 0.70924429 1410 A0A384MDW7;P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes no 0 0 1 1.5 0.5 1 1 54.433 54.445 3 2.6476E-25 16154 20230619_1880_Aki_TMTPro18x_K_F1 222.72 202.11 212500 175670 200880 223850 209290 248260 292520 286780 317120 256800 265490 290050 307970 270020 243650 358440 358480 369960 196420 161220 205400 222450 219080 249980 290740 289500 319410 262220 276820 292440 310140 283840 255860 359030 341960 351230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290460000 15906 1410 15073 30262;30263 24247;24248 24247 2 9606 Homo sapiens -0.0036019592751017626 LGAAPEEESAYVAGEK Unmodified 1619.7679 0.76788138 3993 Q53FE8;Q9UNZ2;Q9UNZ2-5;Q53FF5;F2Z2K0;Q9UNZ2-6 NSFL1C NSFL1 cofactor p47 yes no 0 0 0 2.5 0.5 1 1 51.217 51.275 3 0.000251 15045 20230619_1881_Aki_TMTPro18x_K_F2 87.932 76.662 103690 95845 103940 115790 103800 121020 129100 123280 151950 150850 118920 124970 160880 119700 124060 141480 147240 140690 95959 87879 105660 115370 108580 122030 129360 126520 152310 150210 125420 127800 161030 124910 128160 141730 140610 133660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192820000 15907 3993 15074 30264;30265 24249 24249 1 9606 Homo sapiens -0.01721184143661958 LGADAVGMSTVPEVIVAR Oxidation (M) 1799.9451 0.94513424 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;A0A8V8TL37;Q9P1G4 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 1 0 6 0 1 56.969 57.041 3 3.7729E-10 16889 20230619_1886_Aki_TMTPro18x_K_F6 140.78 120.4 126840 91069 118780 120300 96823 121020 108090 116760 129570 100720 123610 132890 108770 102440 122480 141600 110900 145000 117130 83656 121010 119100 102780 122170 109080 119180 130400 103660 126550 132480 112190 108670 123790 141790 106460 137560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215310000 15908 3373 15075 30266 24250 24250 1972 1 9606 Homo sapiens 0.0771594813484171 LGADAVGMSTVPEVIVAR Unmodified 1783.9502 0.95021962 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;A0A8V8TL37;Q9P1G4 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 0 0 6 0 1 61.68 61.735 3 0.00073667 18867 20230619_1886_Aki_TMTPro18x_K_F6 78.441 58.335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15909 3373 15075 30267 24251 24251 1 9606 Homo sapiens 0.08960251997473279 LGADESEEEGRR Unmodified 1346.6062 0.60623578 3269 O43847;O43847-2;Q96L67 NRD1 Nardilysin yes no 0 0 1 1 0 1 31.448 31.448 3 3.0369E-18 6546 20230619_1880_Aki_TMTPro18x_K_F1 235.49 194.78 43334 23932 34298 36838 49768 52607 42884 47213 59656 47401 51513 47195 51411 43229 37555 40360 58244 48084 39919 22051 35836 36328 50323 51860 44151 48578 59473 47921 53174 47782 51834 44590 39582 41036 55457 45626 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77534000 15910 3269 15076 30268 24252 24252 1 9606 Homo sapiens -0.05320308386103534 LGAEVYHTLK Unmodified 1129.6132 0.61315906 3418 Q6FHV6;P09104;A8K3B0;P09104-2 ENO2 Gamma-enolase yes no 0 0 0 4.5 3.5 1 1 49.5 49.537 3 9.6586E-06 14168 20230619_1880_Aki_TMTPro18x_K_F1 153.12 83.019 576450 436420 509950 571450 388730 403400 503860 513660 496270 641980 711880 751220 683770 607390 721090 712230 745030 799220 532270 400770 522030 563880 416300 423320 501600 520870 514980 644720 719470 752610 700600 636770 733890 718960 712980 757980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 771940000 15911 3418 15077 30269;30270 24253;24254 24253 2 9606 Homo sapiens 0.05353701023091162 LGAGPDGVEEIKR Unmodified 1339.7096 0.70957864 1408 B1AXG1;P51812;A0A384MDW3;B7ZB17;B4DG22;B4DKZ2 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes no 0 0 1 5 0 1 45.558 45.635 3 0.0020608 11922 20230619_1885_Aki_TMTPro18x_K_F5 75.102 52.904 57311 49200 63158 51535 53411 62883 66813 60234 69453 70072 71569 49604 68418 47688 70311 57304 54980 49521 53055 45063 63465 52057 56612 62679 66681 61972 70691 69673 73058 51277 69915 49823 70544 57046 52715 47138 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50736000 15912 1408 15078 30271 24255 24255 1 9606 Homo sapiens 0.053312237923591965 LGAGPGDAGEVQAHPFFR Unmodified 1824.8907 0.89073091 2453 B4DDM0;P23443-4;P23443-3;P23443-5;P23443-2;P23443 RPS6KB1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase beta-1 yes no 0 0 0 7 0 1 50.275 50.356 3 7.256500000000001E-31 13771 20230619_1887_Aki_TMTPro18x_K_F7 238.12 228.36 161700 144770 165970 189830 160130 195720 184830 178010 206800 223120 247820 247030 235730 208680 222540 273300 257620 278900 149640 132860 168330 188020 167600 197000 185650 184350 211100 223780 251800 248470 240420 219890 228760 273750 246300 264760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132040000 15913 2453 15079 30272 24256;24257 24257 2 9606 Homo sapiens 0.011281170982556432 LGANSLLDLVVFGR Unmodified 1472.8351 0.83511351 21 A0A024QZ30;P31040;P31040-2;D6RFM5;B3KT34;Q0QF12;P31040-3;B4DYN5;H0Y8X1 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 5 0 1 66.24 66.283 3 5.4142E-12 20687 20230619_1885_Aki_TMTPro18x_K_F5 184.98 159.36 6734.9 4996.2 7184 7908 6419.4 7089.6 5338.8 6677.7 9012.5 6216.3 6750.5 7304.5 7350.5 7382.2 7212.2 7676.8 8050.5 8808.1 6227.4 4598.7 7250.6 7731.7 6706.5 7218.5 5565.8 6838.9 8876.2 6347.8 7062.1 7369.6 7486.3 7624.1 7385.2 7772.2 7699.8 8351.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101810000 15914 21 15080 30273 24258 24258 1 9606 Homo sapiens 0.11760935648590021 LGAPALTSR Unmodified 884.50797 0.50796571 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4;H0YIZ0 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 1.5 0.5 1 1 43.485 43.526 2 0.00083371 11481 20230619_1881_Aki_TMTPro18x_K_F2 121.74 83.506 302870 244340 292740 281050 323970 416040 350340 307000 460060 269840 304980 331010 242790 212570 385110 303220 323920 305380 279960 224030 298720 282580 335410 407810 354850 320270 455550 276990 317930 329230 256630 227880 385270 303630 310390 290090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 764400000 15915 657 15081 30274;30275 24259 24259 1 9606 Homo sapiens 0.061092046173257586 LGAPLSGLQGLPECTR Unmodified 1667.8665 0.86648999 3618 P50479;A0A0S2Z4P0 PDLIM4 PDZ and LIM domain protein 4 yes no 0 0 0 1.5 0.5 1 1 59.101 59.108 3 2.4708E-08 18139 20230619_1880_Aki_TMTPro18x_K_F1 134.76 114.52 117670 93515 112220 111190 77615 102970 95063 105850 112860 148040 115060 118320 158100 118500 117310 158250 138450 140960 108750 85776 113920 110770 84004 104800 95498 109040 114310 146390 119820 121460 157950 124420 121400 157300 132280 134060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160950000 15916 3618 15082 30276;30277 24260 24260 1 9606 Homo sapiens 0.0592714062036066 LGAPQQPGPGPPPSR Unmodified 1454.763 0.7630112 1186 B3KY04;A0A140VJM4;Q96CX2 KCTD12 BTB/POZ domain-containing protein KCTD12 yes no 0 0 0 5.33 3.09 1 1 1 40.48 40.5 3 2.5215E-11 9673 20230619_1888_Aki_TMTPro18x_K_F8 166.86 149.39 73187 59653 69928 76019 102600 120530 108350 108980 139870 103380 112100 132410 112350 105010 119190 125840 139760 137690 67647 54749 71869 75990 104240 118190 109810 111940 139490 105740 116500 132140 115100 110270 122250 126770 133510 130660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 233620000 15917 1186 15083 30278;30279;30280 24261;24262 24262 2 9606 Homo sapiens 0.05382021294894912 LGAQALLGAAK Unmodified 1011.6077 0.60767975 540 P32322-3;P32322;A0A024R8U9;E7D7X9;P32322-2;A0A1B2JLU7;E7D7Y0;Q2TU78;J3QKT4;Q8TBX0;J3KQ22;J3QL24 PYCR1;PIG45 Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase yes no 0 0 0 3.5 0.5 2 2 56.128 56.15 2;3 2.4816E-06 16716 20230619_1883_Aki_TMTPro18x_K_F4 189.13 161.61 180650 186210 167040 172180 163100 241950 202550 197770 275850 42434 44205 43360 43170 36553 101990 51323 49944 41795 167210 170280 170890 176060 171430 238260 204000 200960 266800 51727 56332 43915 46967 38694 99521 50971 48233 39828 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 339050000 15918 540 15084 30281;30282;30283;30284 24263;24264 24264 2 9606 Homo sapiens 0.10234022231270501 LGASLAFNNIYR Unmodified 1337.7092 0.70918471 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5 0 1 59.196 59.25 2 1.9593E-34 17587 20230619_1885_Aki_TMTPro18x_K_F5 236.32 165.41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15919 3758 15085 30285 24265 24265 1 9606 Homo sapiens 0.053838488631754444 LGAVDESLSEETQK Unmodified 1504.7257 0.72568222 4359 Q96HE7;G3V5B3;G3V3E6 ERO1L ERO1-like protein alpha yes no 0 0 0 2 0 2 53.638 53.666 2;3 3.716E-08 16002 20230619_1881_Aki_TMTPro18x_K_F2 186.46 164.47 316420 232760 309090 291670 275280 262530 284740 307330 414920 395730 409550 436980 440950 383640 324410 458450 473160 452810 292340 213670 313870 289490 288800 268870 290750 313220 415140 396480 421800 439870 443710 401370 340870 458800 451140 430220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 463650000 15920 4359 15086 30286;30287 24266;24267 24266 2 9606 Homo sapiens -0.0064915955206288345 LGAVFNQVAFPLQYTPR Unmodified 1920.0258 0.025767826 3931 Q15393;A8K6V3;B3KQH1;B3KM77 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 7.5 0.5 1 1 64.42 64.445 3 1.9553E-30 19840 20230619_1887_Aki_TMTPro18x_K_F7 236.12 210 81856 75047 81920 85870 81705 90753 93550 92766 97825 104390 98377 92359 98977 93543 98246 102390 108280 117350 75748 68776 83238 85924 85192 91466 93786 94933 99496 104500 100920 94356 101040 96926 100500 103570 103570 111270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 842680000 15921 3931 15087 30288;30289 24268;24269 24268 2 9606 Homo sapiens 0.10255597240029601 LGAVPATSGPTTFK Unmodified 1345.7242 0.72416608 3013 G3XAG1;Q96ME7-3;Q96ME7 ZNF512 Zinc finger protein 512 yes no 0 0 0 3 0 1 53.29 53.343 3 0.00025426 15661 20230619_1882_Aki_TMTPro18x_K_F3 93.649 70.868 136190 106220 117660 135990 136720 115940 160490 140800 147970 164460 187710 161140 163990 141090 138990 195280 184860 166340 125760 97510 121440 134640 140830 119430 160020 142840 153050 164770 189480 163220 166970 149010 144620 193580 176300 158370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104720000 15922 3013 15088 30290 24270 24270 1 9606 Homo sapiens 0.0651329594049912 LGAVYDVSHYNALLK Unmodified 1661.8777 0.8777066 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 2.67 0.471 1 2 60.312 60.335 3 2.1104999999999998E-19 18720 20230619_1881_Aki_TMTPro18x_K_F2 214.45 173.9 338350 239310 288640 341370 245110 334670 319390 306070 405530 430410 397420 450140 504240 409790 362830 520710 488070 538110 312220 220030 297090 336100 260800 338050 320400 318110 408220 428970 413010 454590 504520 430030 379230 521950 466120 510730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 236460000 15923 1723 15089 30291;30292;30293 24271;24272 24271 2 9606 Homo sapiens 0.0732428598619208 LGCFNLTVK Unmodified 1050.5532 0.55320134 4305 Q92769;Q92769-3;B3KUJ5 HDAC2 Histone deacetylase 2;Histone deacetylase yes no 0 0 0 3 0 1 59.146 59.175 2 0.021704 18074 20230619_1882_Aki_TMTPro18x_K_F3 76.605 35.156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15924 4305 15090 30294 24273 24273 1 9606 Homo sapiens 0.029946870881985888 LGDDEVR Unmodified 802.3821 0.38209649 3890 Q14444-2;Q14444;G3V153;B3KXU8;E9PLA9 CAPRIN1 Caprin-1 yes no 0 0 0 1 0 1 36.758 36.758 2 0.0034523 8691 20230619_1880_Aki_TMTPro18x_K_F1 154.92 93.958 314050 125770 391680 398550 409700 566740 390790 458730 489960 331360 524880 609610 495060 454320 435960 161360 594130 560430 290060 117660 391860 381620 424490 556870 398520 472590 494080 350420 536050 600090 503690 458550 451460 190190 566700 528200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 337380000 15925 3890 15091 30295 24274 24274 1 9606 Homo sapiens -0.02699926958746346 LGDEDEEIDGDTNK Unmodified 1548.6427 0.64274045 1981 P09884;A6NMQ1 POLA1 DNA polymerase alpha catalytic subunit;DNA polymerase yes no 0 0 0 1 0 1 47.642 47.642 2 0.0022962 13380 20230619_1880_Aki_TMTPro18x_K_F1 106.29 96.059 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15926 1981 15092 30296 24275 24275 1 9606 Homo sapiens -0.10963521070721072 LGDFPYVSILDPR Unmodified 1490.7769 0.77692993 3336 O94888;C9JAT7;B4E126 UBXN7 UBX domain-containing protein 7 yes no 0 0 0 1 0 1 64.516 64.516 2 0.0009671 20320 20230619_1880_Aki_TMTPro18x_K_F1 123.63 93.816 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15927 3336 15093 30297 24276 24276 1 9606 Homo sapiens 0.05117254003312155 LGDLGAIDEK Unmodified 1029.5342 0.53424004 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;B3KVJ5 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 3.5 0.5 1 1 55.814 55.838 3 0.013459 16719 20230619_1882_Aki_TMTPro18x_K_F3 71.524 38.436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15928 4593 15094 30298;30299 24277;24278 24277 2 9606 Homo sapiens 0.02065428998139396 LGDLYEEEMR Oxidation (M) 1269.5547 0.55471749 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8 VIM;HEL113 Vimentin yes no 0 1 0 1.5 0.5 2 2 50.574 50.6 2 0.0084778 14845 20230619_1880_Aki_TMTPro18x_K_F1 76.1 67.636 245210 177250 211960 210260 436580 473590 339180 333590 412380 381540 430780 402840 434520 363180 363430 441300 394790 425920 226320 162640 221490 212970 433220 455670 349700 351430 416770 383910 440990 406850 439910 380070 373000 441140 377640 404590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1876699999.9999998 15929 3414 15095 30300;30301;30302;30303 24279;24280;24281 24280 2028 3 9606 Homo sapiens -0.06927768404375456 LGDLYEEEMR Unmodified 1253.5598 0.55980286 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8 VIM;HEL113 Vimentin yes no 0 0 0 2 0.816 1 1 1 55.06 55.081 2 9.1549E-14 16592 20230619_1881_Aki_TMTPro18x_K_F2 232.46 212.13 643960 474880 527030 489110 817000 1228000 827870 832700 1047500 1095200 948580 1042600 981220 1064100 719990 1123100 740620 1108600 594190 435140 549820 502380 829210 1175800 840370 883930 1051600 1091800 979570 1060900 989490 1099100 740310 1125800 710960 1051700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5746600000 15930 3414 15095 30304;30305;30306 24282;24283;24284 24283 3 9606 Homo sapiens -0.05683464541743888 LGDSHDLQR Unmodified 1039.5047 0.50467125 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 33.205 33.27 3 2.2816E-05 6908 20230619_1882_Aki_TMTPro18x_K_F3 158.76 120.19 400890 276620 387350 404560 511040 499100 433050 487180 620860 457820 584950 561230 553920 476320 526600 461860 647660 578020 370230 254440 396460 399170 518820 497240 447060 497540 619820 467720 600250 562230 565170 493470 542230 471130 618030 548040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 442710000 15931 1022;3868 15096 30307;30308 24285;24286;24287 24287 3 9606 Homo sapiens -0.013500902273563042 LGDSSLSR Unmodified 833.4243 0.42429566 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 4 0.816 1 1 1 38.23 38.293 2 0.00014054 8825 20230619_1883_Aki_TMTPro18x_K_F4 174.73 126.98 169850 90058 170540 181680 198140 221080 192310 197700 249260 184400 221160 214570 220180 181070 200150 131760 264630 225870 156720 83322 173660 176280 203580 219840 196000 203220 249350 188130 228120 215190 223820 185460 207020 138710 252300 213680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 200890000 15932 3152 15097 30309;30310;30311 24288;24289 24288 2 9606 Homo sapiens 0.0009204844961914205 LGDTPGVSYSDIAAR Unmodified 1520.7471 0.74708636 4499 Q9H269;Q5JUA9;Q9H269-2;Q6GMQ7 VPS16 Vacuolar protein sorting-associated protein 16 homolog yes no 0 0 0 5 0 1 51.841 51.915 2 2.4248E-10 14579 20230619_1885_Aki_TMTPro18x_K_F5 202.05 167.8 24842 18228 25439 27912 23418 30188 27456 26438 31396 34794 35753 40747 41100 36263 32321 39825 41839 46688 22960 16772 25782 27405 24628 30247 27579 27501 31957 34896 36737 40924 41375 37745 33588 40325 39973 44254 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39866000 15933 4499 15098 30312 24290 24290 1 9606 Homo sapiens 0.007542702673617896 LGDVISIQPCPDVK Unmodified 1539.7967 0.79667909 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 0 6.5 0.5 1 1 60.529 60.579 3 4.3373E-09 17993 20230619_1887_Aki_TMTPro18x_K_F7 163.27 144.67 118840 99517 97623 117670 109600 123990 125430 133530 137430 142090 123230 129630 149610 127620 128890 155580 130820 137240 109740 91258 101250 117430 113390 125120 125930 135940 138880 142750 128310 132090 150870 133170 131680 154810 125190 130520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1212400000 15934 3656 15099 30313;30314 24291 24291 1 9606 Homo sapiens 0.04837261951774963 LGDVYVNDAFGTAHR Unmodified 1633.7849 0.78486885 3374;1199 V9HWF4;P00558;P00558-2;B4E1H9;P07205;A0A140VJR3;V9HW85 HEL-S-68p;PGK1;PGK2;HEL-S-272 Phosphoglycerate kinase;Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 no no 0 0 0 6.5 0.5 1 1 51.987 52.062 3 9.033699999999999E-44 14768 20230619_1886_Aki_TMTPro18x_K_F6 291.2 263.79 436760 328870 383190 450910 396760 437760 394740 404450 490200 543880 467200 559780 571140 498970 492520 597750 572530 656030 403250 302160 394270 444980 411280 442880 401200 419310 493710 542640 485590 565100 576060 521990 507230 602030 547590 622180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6778499999.999999 15935 3374;1199 15100 30315;30316 24292;24293 24292 2 9606 Homo sapiens -0.006672187472304358 LGEEAFFYHSNCK Unmodified 1600.698 0.69802768 253 A0A024R3M1;Q9P016;Q9P016-2 THYN1 Thymocyte nuclear protein 1 yes no 0 0 0 6 0 1 51.67 51.747 3 2.1429E-08 14654 20230619_1886_Aki_TMTPro18x_K_F6 191.95 178.97 169510 189920 180750 170520 174830 193920 186860 189210 208790 193650 205990 224250 227550 199080 219090 227390 251960 247740 157190 173600 182520 174320 182370 194360 188460 193740 211350 196420 212590 225400 231230 207680 224780 229170 240720 235110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194710000 15936 253 15101 30317 24294 24294 1 9606 Homo sapiens -0.07829341293268044 LGEFFQTK Unmodified 968.49673 0.49673232 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2;K7EP67 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 3 2.92 2 1 1 59.799 59.811 2;3 0.0038219 18395 20230619_1880_Aki_TMTPro18x_K_F1 118.26 84.261 136540 133630 146170 158660 154050 166030 167820 147780 153890 159300 162630 129480 162450 122080 191600 150310 144910 150780 126490 122480 147880 158270 159620 166960 167980 152610 157970 159480 166330 132660 167010 127790 191510 150750 139140 143180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 212320000 15937 2436 15102 30318;30319;30320;30321 24295;24296;24297 24295 3 9606 Homo sapiens 0.011223825231809315 LGEGEGSMTK Oxidation (M) 1023.4543 0.45427516 2117;4752 A8K885;Q9UNH7;A0A0A0MRI2;G3V5X9;H0YJF8;G3V4Z5;G3V2U1;Q9Y5X3;Q53FH8;Q6P5V6;B7Z476;Q5QPE4;Q5QPE5 SNX6;SNX5 Sorting nexin-6;Sorting nexin-6, N-terminally processed;Sorting nexin-5 no no 0 1 0 3 0 1 38.479 38.532 2 0.001572 8952 20230619_1882_Aki_TMTPro18x_K_F3 97.565 51.437 38586 22118 38220 45758 46350 52393 40928 52074 55358 44449 56886 67795 59385 50916 50524 37956 75646 66466 35610 20464 39020 44303 47392 52417 42061 52997 55601 46043 58463 67121 60135 52419 52837 39993 72071 62861 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14621000 15938 2117;4752 15103 30322 24298 24298 1331 1 9606 Homo sapiens -0.05651380667336525 LGEHEFEALMR Unmodified 1330.634 0.63397086 3551 Q05DK5;P35612-4;P35612-3;P35612;P35612-2;P35612-8;P35612-9 ADD2 Beta-adducin yes no 0 0 0 3.5 0.5 1 1 52.913 52.954 3 2.5972E-09 15329 20230619_1883_Aki_TMTPro18x_K_F4 184.36 153.53 46642 39465 48724 52002 43133 48574 41518 37781 51473 47341 41510 48798 49800 39855 45791 46049 48937 54983 43154 36228 49248 51425 45221 49133 42279 39640 51503 47397 43475 49125 50362 41763 46809 46674 46834 52107 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129400000 15939 3551 15104 30323;30324 24299 24299 1 9606 Homo sapiens -0.01812076659575723 LGEHLYK Unmodified 858.45995 0.45995289 434 E9PFH4;B2R6H7;A0A024R794;Q9Y5L0-3;Q9Y5L0;C9J7E5;Q9Y5L0-5;Q9Y5L0-1 TNPO3 Transportin-3 yes no 0 0 0 7.5 0.5 1 1 42.429 42.468 3 0.070489 10507 20230619_1888_Aki_TMTPro18x_K_F8 46.994 19.469 98270 81363 95562 99431 92899 117500 104420 109460 120230 111710 109350 107370 118570 98413 107220 118100 115170 112580 90854 74638 97302 99173 97154 117220 105130 112410 121160 112670 113100 108920 120170 102860 109720 118040 110100 107000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147020000 15940 434 15105 30325;30326 24300 24300 1 9606 Homo sapiens 0.025061306972816055 LGEHNIDVLEGNEQFINAAK Unmodified 2210.0968 0.096760517 2772 CON__P00761 yes yes 0 0 0 5.5 0.5 1 1 58.021 58.084 3 2.0311E-11 17246 20230619_1885_Aki_TMTPro18x_K_F5 133.16 109.84 + 17947 15274 19084 20655 20729 18622 22089 23826 25684 22454 22977 23849 20666 17523 23612 25895 21751 23319 16608 14025 19322 20394 21402 19112 22308 23941 25845 22802 23614 23939 21305 18721 23871 25737 20840 22170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2337500000 15941 2772 15106 30327;30328 24301 24301 1 0.04011600696185269 LGEINVIGEPFLNVNCEHIK Unmodified 2294.1729 0.17290235 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;A0A3B3IS57;A0A3B3ITP6;A0A8V8TKP2 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 7 0 1 62.27 62.305 3 1.0541E-07 18844 20230619_1887_Aki_TMTPro18x_K_F7 100.21 84.617 99186 83823 88947 86761 65895 74874 79834 100500 97551 122780 105820 100820 128340 69237 69111 128570 132690 107030 91655 76772 90834 87321 70715 77247 80346 101420 98868 122110 109040 102300 127250 75775 75144 126840 126160 101980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 797520000 15942 471 15107 30329 24302 24302 1 9606 Homo sapiens 0.07758281272026579 LGELILTSESSR Unmodified 1303.6983 0.69834526 3136 Q14197;J3KS15 ICT1 Peptidyl-tRNA hydrolase ICT1, mitochondrial yes no 0 0 0 5.5 0.5 1 1 59.292 59.35 2 1.0571E-09 17612 20230619_1885_Aki_TMTPro18x_K_F5 188.28 146.77 89809 78929 95274 96005 94276 105400 106690 111520 120540 110420 101790 96140 122730 99782 104270 122200 106380 109760 83124 72386 96325 95705 98336 106000 107300 113440 121300 111240 106200 98430 123690 104010 106570 121690 101780 104370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 146610000 15943 3136 15108 30330;30331 24303;24304 24303 2 9606 Homo sapiens 0.05864401698204347 LGELPSWILMR Unmodified 1313.7166 0.71657828 2498;3661 G3V325;B4DJ38;C9JJT5;P56134-4;P56134-2;C9JU26;P56134;P56134-3 ATP5J2-PTCD1;ATP5J2 ATP synthase subunit f, mitochondrial no no 0 0 0 4 0 1 64.57 64.58 2 1.1154E-08 20256 20230619_1883_Aki_TMTPro18x_K_F4 182.24 138.53 44651 41190 44683 47774 38348 55700 51034 54402 57187 58112 54078 49224 54632 47046 55407 55963 56567 56709 41321 37752 45333 47819 40781 55661 50926 55743 57800 58259 55634 50314 55782 49084 56395 56137 54113 53854 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127280000 15944 2498;3661 15109 30332 24305 24305 1 9606 Homo sapiens 0.07226865139250549 LGEMWNNLNDSEK Unmodified 1548.6879 0.68785692 3240 O15347;E9PES6;E7ES08;E7EQU1 HMGB3 High mobility group protein B3 yes no 0 0 0 4 0 1 60.315 60.318 3 0.00011412 18475 20230619_1883_Aki_TMTPro18x_K_F4 98.368 76.593 81047 69287 82143 80599 72273 101800 79291 89404 103990 93420 81406 88661 89550 77419 94698 97031 84866 99631 74972 63523 83214 80762 76255 100990 80346 92251 103660 94082 85016 89817 91390 81276 95681 97332 81396 94548 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19373000 15945 3240 15110 30333 24306;24307 24307 2 9606 Homo sapiens -0.06453949018509775 LGEMWNNTAADDK Unmodified 1463.6351 0.63509307 772 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;A0A286R9D9;B3KQ05;B2RPK0;D3DQY9 HMGB1;HMGB1P1;hCG_1991922 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 0 0 0 4 0 1 55.413 55.424 2 0.0030829 16398 20230619_1883_Aki_TMTPro18x_K_F4 86.313 76.359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15946 772 15111 30334 24308 24308 1 9606 Homo sapiens -0.07817907081312114 LGEMWNNTAADDKQPYEK Oxidation (M) 2124.9422 0.94223371 772 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;A0A286R9D9;B3KQ05;D3DQY9 HMGB1;hCG_1991922 High mobility group protein B1 yes no 0 1 1 5 0.816 1 1 1 49.886 49.949 3 0.00031388 13721 20230619_1885_Aki_TMTPro18x_K_F5 80.585 61.826 50303 39449 39460 43962 52791 48390 51660 49991 46909 58089 60465 55156 68820 49847 62937 65234 60788 67915 46418 36165 41203 44099 53677 48674 52011 51173 48665 58154 61739 55980 69618 52461 63998 65447 58232 64451 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186570000 15947 772 15112 30335;30336;30337 24309 24309 469 1 9606 Homo sapiens -0.07523971780619831 LGEMWNNTAADDKQPYEK Unmodified 2108.9473 0.94731909 772 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;A0A286R9D9;B3KQ05;D3DQY9 HMGB1;hCG_1991922 High mobility group protein B1 yes no 0 0 1 6.5 0.5 1 1 54.277 54.348 4 0.00017306 15735 20230619_1886_Aki_TMTPro18x_K_F6 90.754 74.069 237800 206910 259800 254220 234990 335720 241910 283100 313290 385540 313010 413770 418520 352360 355700 411000 410280 446040 220140 189780 261750 253920 246910 331900 245950 295400 315730 384900 326450 416210 420840 368660 366120 413880 392270 423150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 920770000 15948 772 15112 30338;30339 24310;24311 24310 2 9606 Homo sapiens -0.06279667918033738 LGEMWSEQSAK Oxidation (M) 1280.5707 0.5707019 4068;3509 Q5U071;P26583 HMGB2 High mobility group protein B2 no no 0 1 0 4.5 0.5 1 1 48.553 48.61 2 0.00012624 13346 20230619_1883_Aki_TMTPro18x_K_F4 132.22 109.64 50408 45246 48242 52105 44248 47135 48386 48168 57667 58598 71955 61361 60271 60282 71038 77138 77785 95230 46623 41471 49143 52006 46391 48087 48863 49434 58766 58753 72590 62211 62463 63104 72462 78224 74480 90194 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100480000 15949 4068;3509 15113 30340;30341 24312 24312 2173 1 9606 Homo sapiens -0.058360621674637514 LGEMWSEQSAK Unmodified 1264.5758 0.57578728 4068;3509 Q5U071;P26583 HMGB2 High mobility group protein B2 no no 0 0 0 5.5 0.5 1 1 54.526 54.598 3 5.4412E-05 15835 20230619_1886_Aki_TMTPro18x_K_F6 129.89 94.152 158590 114210 144820 116440 83614 138410 147230 125130 150070 154400 150520 185670 190140 184380 196070 207890 220680 263220 146430 104660 147230 117830 93772 137930 144870 129600 152770 155470 156470 186970 193280 191460 200700 211570 211210 249270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1051399999.9999999 15950 4068;3509 15113 30342;30343 24313 24313 1 9606 Homo sapiens -0.04591758304832183 LGENVANIYK Unmodified 1119.5924 0.59242362 2106 Q5HYB3;A8K7F7;Q9Y3I1-3;Q9Y3I1-2;Q9Y3I1 DKFZp686B08113;FBXO7 F-box only protein 7 yes no 0 0 0 8 0 1 52.693 52.767 2 0.00018431 14741 20230619_1888_Aki_TMTPro18x_K_F8 122.26 70.262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15951 2106 15114 30344 24314 24314 1 9606 Homo sapiens 0.03741110643431966 LGEQVFGTTGK Unmodified 1135.5873 0.58733824 124 Q8NCD8;A0A024R124;F8VX04;Q9H2H9 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 0 0 0 7.5 0.5 1 1 52.744 52.817 3 0.028045 14841 20230619_1887_Aki_TMTPro18x_K_F7 55.261 41.452 40895 29618 34878 39975 34780 37490 40259 43149 49861 44190 38140 42705 44402 40628 37899 51120 71181 49253 37741 27213 35959 39484 36302 38224 40572 43713 49792 44566 39986 43348 44883 42519 40550 51058 67632 46881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83382000 15952 124 15115 30345;30346 24315 24315 1 9606 Homo sapiens 0.024968067808231353 LGESQTLQQFSR Unmodified 1392.6997 0.69974224 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 7 0.816 1 1 1 49.083 49.161 2;3 9.8064E-18 13187 20230619_1887_Aki_TMTPro18x_K_F7 235.06 178.63 370520 303260 314090 358030 316770 363350 376500 355670 422670 400770 421960 385580 454990 378360 387200 484660 458260 458940 342180 278110 324100 357160 330700 366880 377550 365190 427920 402260 434130 392210 460100 396190 399390 483590 437770 436170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 894080000 15953 1022;3868 15116 30347;30348;30349 24316;24317 24316 2 9606 Homo sapiens 0.019100357869774598 LGEVALLQGNHQIVEMCYQR Oxidation (M) 2373.1569 0.15693471 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 1 0 8 0 1 54.558 54.625 3 0.013327 15527 20230619_1888_Aki_TMTPro18x_K_F8 47.991 40.369 73738 61767 65752 71077 66598 72531 74902 70587 71258 83469 85253 75242 90061 73113 70968 91233 79352 77213 68132 56627 67501 71050 69319 73212 74946 72605 73421 83396 86939 76737 90824 76450 73077 90552 75827 73493 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237100000 15954 3647 15117 30350 24318 24318 2337 1 9606 Homo sapiens 0.025282517635332624 LGEVVNTHGPVEPDK Unmodified 1589.8049 0.80493559 1670 P30419;A0A7I2V539;Q96HI4;P30419-2;A0A7I2V3X4;A0A7I2V3U5;A0A7I2V4Y5;K7EN82 NMT1 Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase yes no 0 0 0 3.5 0.5 1 1 46.778 46.838 3 1.5501E-10 12515 20230619_1883_Aki_TMTPro18x_K_F4 150.76 138.97 299460 202530 238940 280130 236460 344710 278890 281940 372330 337620 359970 422590 467620 400730 274710 572500 542900 569990 276140 186180 248070 277200 247940 341930 281620 293880 373510 341020 374770 424680 465040 423100 299190 571410 517040 541300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 391880000 15955 1670 15118 30351;30352 24319;24320;24321 24321 3 9606 Homo sapiens 0.03362532192750223 LGEVVNTHGPVEPDKDNIR Unmodified 2088.06 0.05998108 1670 P30419;A0A7I2V539;Q96HI4;P30419-2;A0A7I2V3X4;A0A7I2V3U5;A0A7I2V4Y5;K7EN82 NMT1 Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase yes no 0 0 1 5.5 0.5 1 1 45.716 45.798 4 0.00011572 11938 20230619_1885_Aki_TMTPro18x_K_F5 89.483 76.426 64897 49905 60462 61368 67453 69437 73852 69592 64710 72477 71175 55036 61746 45610 73217 46735 45576 34882 59952 45796 61898 61152 69614 69622 73814 71155 66741 72530 72238 56345 63766 47448 72575 46389 43800 33296 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334660000 15956 1670 15119 30353;30354 24322 24322 1 9606 Homo sapiens 0.059473488703133626 LGEWNEK Unmodified 874.41848 0.418482 861 Q6FGS1;Q53GA0;A0A087WYR3;O43399;O43399-5;O43399-7;B4DDV4 TPD52L2 Tumor protein D54 yes no 0 0 0 4 0 1 49.333 49.368 2 0.039536 13683 20230619_1883_Aki_TMTPro18x_K_F4 84.476 40.029 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15957 861 15120 30355 24323 24323 1 9606 Homo sapiens -0.02375050062050832 LGEWVGLCK Unmodified 1060.5376 0.53755128 3501 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 0 1.67 0.471 1 2 61.319 61.326 2;3 0.00061895 19152 20230619_1881_Aki_TMTPro18x_K_F2 143.01 82.037 450480 385100 401440 430710 357940 447970 452700 465480 527080 557710 457280 480700 613620 487350 461770 835330 267680 666530 416280 352930 411480 431610 378390 452070 453300 476680 530500 556350 479360 492320 613590 520880 463830 823130 260750 633400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2977199999.9999995 15958 3501 15121 30356;30357;30358 24324;24325 24325 2 9606 Homo sapiens 0.00970400571168284 LGEYEDVSR Unmodified 1066.4931 0.49310351 1550 A0A494C0X0;Q99426-2;Q99426;K7EP07;K7EK42;K7EL99 TBCB Tubulin-folding cofactor B yes no 0 0 0 1.5 0.5 1 1 43.888 43.929 2 6.7693E-06 11646 20230619_1881_Aki_TMTPro18x_K_F2 180.34 139.32 612730 411560 472720 561580 527100 573530 564440 521420 661880 571700 730170 732320 627080 584730 673540 658560 743690 740460 564870 378310 493180 554730 544620 577800 569910 537990 670880 580150 741550 731220 645860 611690 687880 665290 710850 702440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 347180000 15959 1550 15122 30359;30360 24326;24327 24327 2 9606 Homo sapiens -0.0374833204132301 LGEYGFQNALIVR Unmodified 1478.7882 0.78816332 2776 CON__P02769 yes yes 0 0 0 1.5 0.5 1 1 61.46 61.466 2 6.1801E-15 19218 20230619_1881_Aki_TMTPro18x_K_F2 219.72 188.92 + 80714 228240 274390 92608 726160 1016700 141900 398540 588450 181700 154050 199350 90864 125820 191970 117470 167180 230180 77261 207430 268350 116810 705240 943250 191130 442310 556330 197180 175970 198910 100110 131730 191670 124700 160640 217200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 977950000 15960 2776 15123 30361;30362 24328 24328 1 9606 Homo sapiens 0.06792076097440258 LGFAGLVQEISFGTTK Unmodified 1666.893 0.89302232 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 3.5 0.5 1 1 65.272 65.294 3 0.022369 20581 20230619_1882_Aki_TMTPro18x_K_F3 51.727 40.466 6003.6 6323.7 7374.6 7594.8 5035 5398.2 7236 6426.8 7734.5 6947.6 9352.3 8790.8 7842.6 7955.1 8245 8590 8091.9 9392.2 5571.8 5795.4 7343.5 7539.6 5467.9 5651.5 7186.9 6516.6 7905.5 7050.5 9450.6 8817.2 8078.4 8260.9 8371.4 8666.7 7752.7 8907.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285560000 15961 2633 15124 30363;30364 24329 24329 1 9606 Homo sapiens 0.08625152783338308 LGFEDGSVLK Unmodified 1063.555 0.55497548 3423 V9HW74;P09936;D6RE83;B2RD14;D6R956;D6R974;A6NLJ7 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 0 0 5 2 1 1 2 2 3 3 2 2 57.257 57.3 2;3 3.2021E-05 17105 20230619_1883_Aki_TMTPro18x_K_F4 177.7 114.21 2062400 1753700 1819000 2135000 1890800 2181300 2015400 1995600 2145300 2279400 2288100 2765500 2155100 2564000 1363800 3391600 1456100 2713600 1905600 1608500 1871100 2125100 1963000 2198000 2029400 2060000 2184900 2303200 2337000 2779000 2170900 2690100 1417900 3351000 1401000 2580000 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 15046000000 15962 3423 15125 30365;30366;30367;30368;30369;30370;30371;30372;30373;30374;30375;30376;30377;30378;30379;30380 24330;24331;24332;24333;24334;24335;24336 24331 7 9606 Homo sapiens 0.025740193777892273 LGFGSFVEK Unmodified 982.51238 0.51238239 849 A0A087WXP3;E9PEE8;B4E2B8;A8K2N5;P18564-2;P18564 ITGB6 Integrin beta;Integrin beta-6 yes no 0 0 0 3.67 3.09 1 1 1 59.331 59.349 2;3 0.0015769 18343 20230619_1881_Aki_TMTPro18x_K_F2 126.41 0 214000 186840 197390 221520 207670 247360 247770 248860 274130 272200 237570 265240 281210 233430 272560 287010 269380 301200 197840 171310 202250 221220 216150 248180 248280 254720 276480 273620 247640 268400 285180 244750 277230 288310 258000 285820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 198010000 15963 849 15126 30381;30382;30383 24337;24338;24339 24338 3 9606 Homo sapiens 0.02042669040235978 LGFLHSGTAK Unmodified 1029.5607 0.56072956 1148 P04637-2;J3KP33;A0A386NC55;A0A386NFX3;A0A386NCX4;B4DNI2;A0A386NC62;H2EHT1;Q1MSW8;A0A386NCB1;A0A386NC25;P04637;A0A386NCW8;P04637-5;P04637-6;P04637-3;A0A0U1RQC9;A0A386NC22;P04637-4;A0A386NDB3;Q2XSC7;K7PPA8;H6U5S3;H6U5S2;E5RMA8;K7PPU4;B6E4X6;A0A386NDA8;A0A386NCU2;A0A386NC20;A0A223PQI5;A0A386NFY2;Q5U0E4;H6U5S4;A0A386NCA6;B4E095;E7EQX7;B4DMH2;Q1MSW9;A0A386NG45;H6U5S5;E7EMR6;S4R334;E9PCY9;A0A514TT49;A0A514TT23;A0A514TT40;A0A514TT08;A0A514TSZ9;A0A514TSZ6;A0A514TSZ1;A0A514TT20;A0A514TT13;L0ES73;A0A514TT50;A2I9Y7;A0A514TT34;L0ESQ5;L0ESB7;L0ES54;L0EQE2;L0EPX4;G4Y083;A0A514TT61;A0A1D8V7A7 TP53;p53 Cellular tumor antigen p53 yes no 0 0 0 3.5 0.5 1 1 46.099 46.16 3 0.00038326 12241 20230619_1883_Aki_TMTPro18x_K_F4 108.47 87.633 70268 52229 61758 63593 76796 96526 82268 75894 89760 74472 79000 62681 81656 66924 62857 69541 67885 64022 64872 47931 63706 63707 78839 94596 82827 78903 90551 75047 81546 64369 82340 69051 64560 69527 64876 60881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 289850000 15964 1148 15127 30384;30385 24340 24340 1 9606 Homo sapiens 0.047131626801501625 LGFMSAFVK Unmodified 998.52592 0.52592396 390 A0A024R6C9;P36957;Q6IBS5;P36957-2;Q86TQ8;Q86TW7;Q86SW4 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes no 0 0 0 6 0 1 63.339 63.388 3 0.0019666 19644 20230619_1886_Aki_TMTPro18x_K_F6 90.657 78.431 52020 50446 55013 53008 51624 72484 73045 65746 84806 24009 22433 18775 26235 24205 38913 23989 24006 22082 48180 46187 55610 53606 54583 71625 72695 66526 83026 26472 26134 19536 27288 24773 38439 24057 23099 21001 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45631000 15965 390 15128 30386 24341 24341 1 9606 Homo sapiens 0.026602035478276775 LGFSEVELVQMVVDGVK Oxidation (M) 1863.9652 0.96520098 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;H0YJG0 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 1 0 7.5 0.5 1 1 65.957 65.979 3 1.0294E-13 20454 20230619_1887_Aki_TMTPro18x_K_F7 157.68 141.54 66176 51019 56933 92951 59633 49560 66173 53177 59473 60519 92305 79011 70747 64535 74604 77415 64510 88721 61099 47044 58838 89734 61766 53494 66142 54426 62205 61318 92136 78963 73062 67712 75268 78211 61988 84059 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 178590000 15966 3441 15129 30387;30388 24342;24343 24342 2075 2 9606 Homo sapiens 0.0677769907470065 LGFSEVELVQMVVDGVK Unmodified 1847.9703 0.97028636 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;H0YJG0 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 0 7 0.816 1 1 1 67.084 67.113 3 1.2826E-18 20947 20230619_1887_Aki_TMTPro18x_K_F7 154.69 139.53 45845 32240 45323 48224 29361 30290 38930 32707 33716 42216 56829 53618 51841 51617 50662 53074 49736 64562 42351 29661 45851 47141 31982 32047 38578 33567 35560 42489 56986 53872 53043 53364 51506 53949 47699 61145 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72231000 15967 3441 15129 30389;30390;30391 24344;24345 24344 2 9606 Homo sapiens 0.08022002937332218 LGFSEYCR Unmodified 1030.4542 0.45421558 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 6.5 0.5 1 1 47.57 47.654 2 0.00081301 12470 20230619_1887_Aki_TMTPro18x_K_F7 155.51 141.52 599120 498920 521800 533950 443370 531800 570620 576370 630540 579840 538300 446420 569900 444100 527060 624430 559860 477900 553460 457110 535440 536690 470700 539040 569920 585770 635260 581820 557450 459730 578400 467810 539030 616140 534780 455760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 617120000 15968 3892 15130 30392;30393 24346;24347 24347 2 9606 Homo sapiens -0.05979335876713776 LGFTDVNK Unmodified 892.46543 0.46543219 7 B4DKC1;A0A0C4DFM1;A0A024QYR3;Q92544;B4DH88;B4DYH6 TM9SF4 Transmembrane 9 superfamily member 4 yes no 0 0 0 7 0 1 51.138 51.215 2 0.0094665 14155 20230619_1887_Aki_TMTPro18x_K_F7 109.86 54.146 110730 94095 90478 102150 100700 96118 115330 101290 115450 111540 112130 130280 124770 99344 119660 125730 139740 143260 102260 86213 93809 102470 104080 97858 115400 103470 117500 112730 115910 130300 126680 104940 122910 126880 133530 135870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121770000 15969 7 15131 30394 24348 24348 1 9606 Homo sapiens 0.01489809489100935 LGGAVPFAPPEVSPEQAK Unmodified 1792.9359 0.93594977 915 A0A096LP25;L0R804;A0A096LNZ0;Q6ZSR9 AAK1 Uncharacterized protein FLJ45252 yes no 0 0 0 7 0 1 60.498 60.541 3 0.0038259 18034 20230619_1887_Aki_TMTPro18x_K_F7 68.329 51.25 33178 28621 33035 35317 29069 36432 36349 37739 42671 44204 40305 45799 50851 41019 43040 51820 49543 56740 30688 26254 33531 35136 30743 36776 36433 38633 43048 44371 41962 46249 51185 43062 44312 52146 47389 53814 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24483000 15970 915 15132 30395 24349 24349 1 9606 Homo sapiens 0.07119922840820436 LGGEVSCLVAGTK Unmodified 1289.6649 0.66493664 1075 P13804;A0A0S2Z3L0;A0A0S2Z3M4;H0YLU7;A0A8I5KVL5;A0A8I5KYH4;A0A8I5KYP7;A0A8I5KUF3;H3BV91;H0YKF0;A0A8I5KU27;J3KN60 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes no 0 0 0 8 0 1 57.669 57.721 3 7.5958E-05 16861 20230619_1888_Aki_TMTPro18x_K_F8 106.49 83.266 77881 68467 81233 71183 84851 65418 80563 63956 87611 82290 68985 60097 90567 47671 85869 115070 86528 114230 72073 62701 82190 71658 87498 66684 81679 65984 88183 81521 72563 61718 91343 53318 87611 114360 82975 108400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1232400000 15971 1075 15133 30396 24350 24350 1 9606 Homo sapiens 0.031690766546716986 LGGGLGGTR Unmodified 786.4348 0.43480077 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-4;B3KPV0 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 0 1.5 0.5 1 1 39.003 39.036 2 0.011345 9656 20230619_1880_Aki_TMTPro18x_K_F1 82.716 47.467 225520 155410 215000 240280 263970 293750 247850 243030 355090 255970 285990 307870 276360 247980 275720 248710 307500 298050 208250 143050 220170 236210 270130 291700 254070 252170 352610 259830 296400 307990 282480 257790 281970 252810 293840 282600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 434080000 15972 33 15134 30397;30398 24351 24351 1 9606 Homo sapiens 0.033040758947208815 LGGGLGGTRR Unmodified 942.53591 0.5359118 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-4;B3KPV0 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 1 5.5 0.5 1 1 32.618 32.677 3 0.00045653 6765 20230619_1886_Aki_TMTPro18x_K_F6 89.08 38.275 78087 99592 81121 77671 104900 102730 96247 93831 100440 76304 89851 79392 81237 67828 94697 80891 97034 76100 72481 90913 82477 80691 106720 101910 97669 95993 101590 78190 92279 80133 83825 71035 96100 80865 92674 72407 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34097000 15973 33 15135 30399;30400 24352 24352 1 9606 Homo sapiens 0.06234527597428041 LGGHGPSFPLK Unmodified 1108.6029 0.60292873 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 4 1.41 1 1 1 1 1 48.108 48.177 3 0.0001743 13304 20230619_1882_Aki_TMTPro18x_K_F3 113.44 85.432 943530 839430 957980 1002200 966790 1057300 995860 1072100 1201200 872320 847130 770310 839760 713080 935930 871840 902280 842740 873040 769680 972270 999700 1004400 1065400 1009000 1088700 1197200 889740 885310 785220 862010 745960 947780 872210 863210 800960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2197100000 15974 3444 15136 30401;30402;30403;30404;30405 24353;24354 24353 2 9606 Homo sapiens 0.052971380884855535 LGGIGQFLAK Unmodified 1002.5862 0.58621603 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 4.5 0.5 2 2 61.996 62.022 2;3 0.00034054 18797 20230619_1885_Aki_TMTPro18x_K_F5 153.78 93.019 941670 795460 830130 980910 863240 1056100 493980 1208200 741100 1012000 606110 823260 993210 723540 518920 1420400 537330 895760 870060 729720 853540 976440 885990 1065300 529670 1216200 738670 1026300 645990 841430 978060 786340 542280 1383900 516410 855040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2530100000 15975 3811 15137 30406;30407;30408;30409 24355;24356 24356 2 9606 Homo sapiens 0.08502637202559526 LGGIPVGVVAVETR Unmodified 1365.798 0.79799972 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8;B4DIG6;B4DWK9;B4DIW1;B4DIR2 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 1 0 1 59.536 59.536 2 7.0237E-13 18300 20230619_1880_Aki_TMTPro18x_K_F1 163.9 100.48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15976 3833 15138 30410 24357 24357 1 9606 Homo sapiens 0.12973264102834037 LGGLDVLEAEFSK Unmodified 1376.7187 0.71874635 4049 Q5SGD2;Q5SGD2-4 PPM1L Protein phosphatase 1L yes no 0 0 0 5 0 1 64.243 64.287 3 0.090801 19883 20230619_1885_Aki_TMTPro18x_K_F5 36.107 13.229 17079 12738 13873 16773 15791 14621 13664 15943 16724 17527 17692 21868 21583 15096 16377 21069 18625 22789 15759 11699 14398 16576 16185 14986 14007 16239 16918 17750 18299 21762 21635 16125 16897 21157 17827 21611 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27813000 15977 4049 15139 30411 24358 24358 1 9606 Homo sapiens 0.04545572358028949 LGGLSISPAGIVK Unmodified 1210.7285 0.72852317 2574 B4DQY8;B5MCS3;Q6IA14;B5MCU6;B5MCQ6;E7ETT9;Q96DB2-2;Q96DB2 HDAC11 Histone deacetylase 11 yes no 0 0 0 6 0 1 51.632 51.709 3 0.0089286 14638 20230619_1886_Aki_TMTPro18x_K_F6 64.55 2.5511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15978 2574 15140 30412 24359 24359 1 9606 Homo sapiens 0.13158805154057518 LGGSAVISLEGK Unmodified 1129.6343 0.63428844 3495 V9HWI5;P23528;G3V1A4;E9PK25 HEL-S-15;CFL1 Cofilin-1 yes no 0 0 0 5.33 3.09 1 1 1 55.986 56.026 3 0.016474 16864 20230619_1880_Aki_TMTPro18x_K_F1 62.338 31.61 193270 160970 180640 192390 160160 203490 200090 201350 239990 222400 205890 246100 252340 229960 221010 312430 273530 317720 178640 147630 184360 191890 169340 204830 200670 206430 240910 224420 215160 248250 254780 242040 228710 312620 261510 301560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 585330000 15979 3495 15141 30413;30414;30415 24360;24361 24360 2 9606 Homo sapiens 0.0746566633195016 LGGSAVISLEGKPL Unmodified 1339.7711 0.77111627 3495 V9HWI5;P23528;G3V1A4;E9PK25 HEL-S-15;CFL1 Cofilin-1 yes no 0 0 1 3.67 3.09 1 1 1 61.535 61.54 2;3 6.4542E-08 18425 20230619_1888_Aki_TMTPro18x_K_F8 189.57 170.83 200680 225150 205760 201180 178340 313200 314540 259230 287860 324570 291250 314840 341660 286990 265650 357090 287140 272470 186040 205790 208420 206770 191790 306810 308210 270310 295090 324220 301020 319040 343450 300540 273160 352760 274420 259740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 561520000 15980 3495 15142 30416;30417;30418 24362;24363;24364 24364 3 9606 Homo sapiens 0.1148215549167162 LGGSLIVAFEGCPV Unmodified 1417.7275 0.72753689 3684 V9HWA6;P60981;P60981-2;B7Z9M9 HEL32;DSTN Destrin yes no 0 0 0 7.5 0.5 1 1 66.335 66.356 2 2.7028E-05 20667 20230619_1887_Aki_TMTPro18x_K_F7 118.5 100.63 21892 14796 12830 17412 14362 15302 17110 18542 17353 19215 15528 20600 22605 17050 17326 23879 19300 22489 20152 13579 13836 17343 14888 15712 17100 18736 17618 19413 16361 20719 22583 18073 17857 23788 18469 21363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59284000 15981 3684 15143 30419;30420 24365 24365 1 9606 Homo sapiens 0.03538222722841056 LGGSPFGPAGTGK Unmodified 1144.5877 0.58767259 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;Q92862 DYNC1H1;Dnchc1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2.5 0.5 1 1 51.504 51.56 2 4.5846E-08 14819 20230619_1882_Aki_TMTPro18x_K_F3 192.14 163.44 178520 144290 165240 171110 171350 185550 175290 193490 215600 221780 213210 224730 249320 192920 212790 261170 238600 254210 164950 132330 169070 170840 177670 186750 177840 197800 217400 222680 220500 226960 251470 203750 218720 260810 228150 241460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158050000 15982 3881 15144 30421;30422 24366;24367 24367 2 9606 Homo sapiens 0.021162265006751113 LGGSPTSLGTWGSWIGPDHDK Unmodified 2167.0334 0.033431979 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;A0A0S2Z4D8;A0A0S2Z4W7;A0A0C4DGP4 PRKCSH Glucosidase 2 subunit beta yes no 0 0 0 8 0 1 61.401 61.43 3 3.5315000000000005E-30 18375 20230619_1888_Aki_TMTPro18x_K_F8 208.17 188.78 90838 73865 96678 98158 72066 106180 104670 96866 99500 102760 106240 122800 108480 95433 116380 116770 116690 127060 84037 67823 97406 97227 77833 106470 103520 99808 101930 104120 108950 122780 111040 100460 118230 117570 111710 120540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88057000 15983 444 15145 30423 24368 24368 1 9606 Homo sapiens -0.0034034002101179794 LGGSQEDQIK Unmodified 1073.5353 0.53530267 1232 A0A140VK56;P37837-2;P37837;F2Z393;B4DID5 TALDO1 Transaldolase yes no 0 0 0 3.5 0.5 2 2 43.495 43.552 2;3 0.00015803 11084 20230619_1883_Aki_TMTPro18x_K_F4 120.76 36.902 256350 157080 251840 282130 311380 380130 271990 321360 463600 291260 399800 452060 401430 378320 311030 267070 458490 491020 236640 144960 257300 275640 318370 375260 282500 331460 458190 301280 413400 448760 405760 386880 325730 282880 437480 463880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 564830000 15984 1232 15146 30424;30425;30426;30427 24369;24370 24370 2 9606 Homo sapiens 0.001476433670404731 LGGTIDDCELVEGLVLTQK Unmodified 2059.0507 0.050721527 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 5 0 1 64.243 64.287 3 7.2209E-25 19852 20230619_1885_Aki_TMTPro18x_K_F5 207.79 193.96 151190 145060 176470 178800 146280 161360 183330 191260 202110 215210 245800 234700 243360 190040 212850 305240 201300 286560 140150 133010 176730 177640 155240 165200 183400 193970 206570 216710 249920 236120 246830 203630 216900 303510 193300 272060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313910000 15985 3622 15147 30428 24371 24371 1 9606 Homo sapiens 0.06355819469763446 LGGYLAEEQATPENPTIR Unmodified 1957.9745 0.97452012 3295 O75165;B3KN02 DNAJC13 DnaJ homolog subfamily C member 13 yes no 0 0 0 4 0 1 54.544 54.559 3 1.8254E-07 16035 20230619_1883_Aki_TMTPro18x_K_F4 119.46 107.09 70218 73230 77921 89043 69160 104490 95664 94837 107810 97825 109040 112030 116760 104040 88105 132600 118050 128830 65099 67122 78503 88811 73443 104190 95295 97640 109140 99170 112140 112880 117620 109050 92001 132440 112730 122370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94629000 15986 3295 15148 30429 24372 24372 1 9606 Homo sapiens 0.033851836846224614 LGHAEQKDEMVPR Oxidation (M) 1524.7355 0.73547582 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 1 1 4 0 1 34.6 34.65 3 0.011438 7408 20230619_1883_Aki_TMTPro18x_K_F4 62.088 52.555 31473 2782.5 27584 32052 38430 17568 31170 30240 37186 30893 45115 30738 26164 23460 26720 23466 20650 18204 28910 2845.8 28499 29719 38683 19162 32041 30056 37808 31175 44977 31003 27318 24424 26811 23308 19799 17355 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15038000 15987 617 15149 30430 24373 24373 350 1 9606 Homo sapiens -0.005902500276761202 LGHAEQKDEMVPR Unmodified 1508.7406 0.7405612 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 1 4.5 0.5 1 1 38.16 38.227 4 1.3841E-10 8809 20230619_1885_Aki_TMTPro18x_K_F5 178.67 151.02 229020 20729 213090 204470 259930 154590 246120 231510 244140 274680 303400 221790 233920 172470 212940 182130 166580 115670 210470 20929 218270 190470 264840 161850 248950 232370 251280 273490 304860 225950 239610 180100 214160 179340 159480 110750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 311320000 15988 617 15149 30431;30432 24374;24375 24375 2 9606 Homo sapiens 0.006540538349327107 LGHAETDEQLQNIISK Unmodified 1794.9112 0.91119158 1731 A0A804HJA4;J3KN16;Q5VYK3;R4GMY1;R4GMY3 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 5.5 0.5 1 1 52.305 52.38 3 1.5569E-14 14796 20230619_1885_Aki_TMTPro18x_K_F5 178.07 167.22 40407 13700 31322 40097 40375 30452 37436 39064 43879 49484 45951 44586 55328 42404 31600 54041 39359 50066 37157 12810 32742 38144 41062 31714 38120 39595 44476 49286 47415 45420 55009 44452 33109 53828 37657 47556 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201150000 15989 1731 15150 30433;30434 24376 24376 1 9606 Homo sapiens 0.045532429674267405 LGHELQQAGLK Unmodified 1192.6564 0.65642086 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;K4DIE0;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 7.5 0.5 1 1 46.874 46.943 3 2.1808E-12 12136 20230619_1887_Aki_TMTPro18x_K_F7 199.68 130.76 303490 61220 235490 287060 313490 256000 299910 302690 378180 340350 350670 330440 391140 321830 278440 397260 315140 329690 278790 58393 246240 270440 318660 262070 305530 307030 379760 341720 362550 335810 392490 336200 287820 393900 301270 313810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 451370000 15990 349;3906 15151 30435;30436 24377;24378 24377 2 9606 Homo sapiens 0.06779890800362409 LGHEPGLVQLVNYYR Unmodified 1756.9261 0.92605378 4256 Q8NG68 TTL Tubulin--tyrosine ligase yes yes 0 0 0 4 1 1 1 58.106 58.149 3 7.3748E-11 17680 20230619_1882_Aki_TMTPro18x_K_F3 160.84 148.31 64326 60827 61248 68647 59446 77157 65868 63476 76207 79216 72713 67693 76923 65632 76419 83676 71175 84518 59514 55731 62504 68793 62172 77054 66369 66221 76957 78883 74932 69195 78344 68742 77474 83820 68243 80218 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53259000 15991 4256 15152 30437;30438 24379;24380 24380 2 9606 Homo sapiens 0.07786779626076168 LGHGEEELETEK Unmodified 1369.6361 0.63613893 582 B0AZM4;A8K6F0;A0A024R9L1;O60306 AQR Intron-binding protein aquarius yes no 0 0 0 2 0 1 41.83 41.907 3 5.8756E-07 10695 20230619_1881_Aki_TMTPro18x_K_F2 148.18 135.35 177870 71341 131660 175690 219090 149750 177120 189600 275970 168530 185900 180750 189120 144920 139870 213860 153060 181980 163590 66364 139050 168300 219110 154360 183950 190390 271660 171990 194960 181880 190510 154320 144250 211790 146520 173070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69690000 15992 582 15153 30439 24381 24381 1 9606 Homo sapiens -0.033893694407424846 LGHGLLSGEYSK Unmodified 1259.651 0.65100113 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 1 0 1 48.204 48.204 3 0.03252 13648 20230619_1880_Aki_TMTPro18x_K_F1 50.484 38.636 34088 25802 33709 34911 37821 40711 38139 39426 72040 44855 42269 52583 52651 42455 42470 59488 58007 60110 31502 23703 34342 34580 39030 40694 39454 40506 70215 45341 45272 52674 52943 45034 44317 59484 55365 57078 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28787000 15993 1213 15154 30440 24382 24382 1 9606 Homo sapiens 0.031561672178895606 LGHGLLSGEYSKPVPESGDGERVPEQK Unmodified 2864.4305 0.43045026 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 2 7 0 1 47.612 47.7 5 3.6548E-05 12528 20230619_1887_Aki_TMTPro18x_K_F7 79.762 70.05 67117 21051 70774 80759 70728 69902 73443 69959 89115 101060 95549 72569 80432 79458 78217 88818 87701 98125 61850 19840 71636 76374 73486 71421 74396 72316 90217 99605 96906 75240 82542 82235 80165 89592 83893 93063 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110460000 15994 1213 15155 30441 24383 24383 1 9606 Homo sapiens 0.0728122488826557 LGHPEALSAGTGSPQPPSFTYAQQR Unmodified 2596.267 0.26701374 3947 Q15942;Q96AF9;Q28617;B4DY85;H0Y2Y8;Q9BUS0;Q15942-2;B4DQR8;H7C3D3 ZYX Zyxin yes no 0 0 0 1 0 1 49.922 49.922 3 1.1587E-34 14319 20230619_1880_Aki_TMTPro18x_K_F1 196.11 184.49 13294 4690.2 10919 14673 13018 13164 19841 20151 20410 22744 17305 17099 18215 17362 15225 22849 16757 19798 12231 4390.8 11349 13960 13528 13567 19615 20163 20655 22664 17939 17625 18435 18184 15664 22679 16039 18826 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29954000 15995 3947 15156 30442 24384;24385 24385 2 9606 Homo sapiens 0.032730916278069344 LGHTDILVGVK Unmodified 1150.671 0.67100829 212 B2RDZ9;A0A024R2T3;Q15024;B4DIU0 EXOSC7 Exosome complex component RRP42 yes no 0 0 0 8 0 1 50.592 50.668 3 0.00025387 13791 20230619_1888_Aki_TMTPro18x_K_F8 106.62 88.003 64771 19595 61161 71667 63451 50192 65551 69175 78833 76065 72081 82842 88993 68124 69323 80972 69840 85832 59628 18447 62498 67719 65649 52772 66401 69565 79330 76686 75069 83249 89296 71477 70936 81403 66928 81414 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182350000 15996 212 15157 30443 24386 24386 1 9606 Homo sapiens 0.10169962948543798 LGHVVMGNNAVSPYQQVIEK Oxidation (M) 2198.1154 0.11538747 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;H0YBP5;A0A7I2V4G3;E5RGA2;A0A7I2V5P9;E5RHS5;H0YAW4 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 1 0 1 0 1 51.493 51.493 3 0.0051345 15023 20230619_1880_Aki_TMTPro18x_K_F1 62.203 51.258 8758.1 6714.3 10858 10914 8759.5 10348 12059 14281 12633 11391 14175 12108 13540 10397 11735 16921 14414 14895 8111.3 6181.4 10826 10670 9350.1 10587 11995 14233 12887 11683 14428 12227 13748 11128 12142 16768 13769 14167 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99005000 15997 1659 15158 30444 24387 24387 1074 1 9606 Homo sapiens 0.06425439066470062 LGHVVMGNNAVSPYQQVIEK Unmodified 2182.1205 0.12047285 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;H0YBP5;A0A7I2V4G3;E5RGA2;A0A7I2V5P9;E5RHS5;H0YAW4 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 0 2 0 1 54.477 54.501 3 0.00011077 16418 20230619_1881_Aki_TMTPro18x_K_F2 73.279 62.335 25787 12518 10113 29966 16052 33616 29191 21583 19358 36522 32008 23192 39648 35181 22875 33522 38223 32815 23664 11623 11818 28791 16692 33365 28333 23304 20854 35703 32505 24574 39441 35818 24457 33647 36386 31195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 530740000 15998 1659 15158 30445 24388 24388 1 9606 Homo sapiens 0.07669742929056156 LGHYATQLQNTYDR Unmodified 1678.8063 0.80633258 1823 A0A8V8TP16;P51692;A0A8V8TM91;A0A8V8TMR0;A0A8V8TP21;A0A8V8TP00;A0A8V8TM84;Q59H39;A0A8V8TMP4;Q8WW55;C9J4I3 STAT5B Signal transducer and activator of transcription 5B;Signal transducer and activator of transcription yes no 0 0 0 8 0 1 46.059 46.097 3 1.2225E-16 11915 20230619_1888_Aki_TMTPro18x_K_F8 208.68 188.55 52109 32316 49718 51282 50880 54054 53826 53308 60885 64440 63586 60584 67942 55844 64135 65851 62137 67632 48092 29770 50727 50247 52830 54416 54333 54808 61770 64408 65288 61523 69000 58311 65185 66112 59509 64198 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39778000 15999 1823 15159 30446 24389 24389 1 9606 Homo sapiens -0.005918337184766642 LGICVTQFDPK Unmodified 1276.6486 0.64855829 3672 P57772;C9J8T0;P57772-2 EEFSEC Selenocysteine-specific elongation factor yes no 0 0 0 1 0 1 60.18 60.18 3 1.3334E-06 18564 20230619_1880_Aki_TMTPro18x_K_F1 138.25 115.33 77914 69005 80354 75320 66249 77911 78405 79973 90347 94885 97634 95910 102780 89016 97161 102910 99395 115920 72101 63219 81183 75635 70297 78653 78766 81952 91683 95119 100050 97096 104470 92807 99060 103910 95193 109910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44007000 16000 3672 15160 30447 24390;24391 24390 2 9606 Homo sapiens 0.02129995488598979 LGIHEDSQNR Unmodified 1167.5632 0.56324876 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 4.5 1.71 1 1 1 1 1 1 32.112 32.18 3 9.7335E-20 6543 20230619_1881_Aki_TMTPro18x_K_F2 218.6 171.41 402070 321890 390660 397750 549990 513970 461110 455390 446190 454820 499770 431160 421760 332190 463630 356320 415060 391720 371650 295360 400100 396970 555450 509810 469700 469170 457720 458880 506510 435440 434590 347430 467430 360060 397430 371770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3799299999.9999995 16001 3177 15161 30448;30449;30450;30451;30452;30453 24392;24393 24392 2 9606 Homo sapiens -0.013830336528599219 LGIHEDSQNRK Unmodified 1295.6582 0.65821178 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 1 5.8 0.748 2 2 1 33.075 33.142 3;4 8.7973E-06 6908 20230619_1886_Aki_TMTPro18x_K_F6 144.27 112.63 371720 231340 264800 361970 336830 389310 299690 348500 450470 433230 439560 547560 504040 455420 259600 541840 703770 643480 342380 213070 279520 354820 343920 390460 309070 361080 450110 436850 454600 547250 501490 477350 294290 547870 668650 610320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2381400000 16002 3177 15162 30454;30455;30456;30457;30458 24394;24395 24395 2 9606 Homo sapiens 0.02220899818325961 LGIHEDSTNR Unmodified 1140.5523 0.55234972 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 0 5 2 1 1 1 1 1 1 1 32.783 32.839 3 2.5221E-14 6696 20230619_1882_Aki_TMTPro18x_K_F3 232.72 202.4 1281600 895840 1153300 1226100 1355500 1472800 1245100 1345700 1552400 1505500 1537200 1586700 1649900 1306500 1300700 1578100 1838300 1596000 1183000 823340 1185600 1214000 1389600 1467500 1271700 1387400 1564000 1515500 1582700 1597300 1663600 1371700 1359900 1581700 1752000 1516600 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 8924900000 16003 751 15163 30459;30460;30461;30462;30463;30464;30465 24396;24397;24398;24399;24400;24401 24397 6 9606 Homo sapiens -0.012304360271400583 LGIHEDSTNRR Unmodified 1296.6535 0.65346075 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 1 4.5 0.5 1 1 28.665 28.737 3 3.3661E-06 5288 20230619_1885_Aki_TMTPro18x_K_F5 135.86 112.62 49511 42916 49478 50744 55080 59279 50824 51796 52884 51685 55623 58947 52561 47039 50135 51723 61007 61159 45798 39349 50349 50719 56638 59135 51581 53432 53880 52459 56834 59089 53651 49162 51631 52428 58267 57988 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107010000 16004 751 15164 30466;30467 24402;24403 24403 2 9606 Homo sapiens 0.017000156755557327 LGIHSALLDEK Unmodified 1194.6608 0.66083754 1405 A0A384MDT9;Q86SX6 GLRX5 Glutaredoxin-related protein 5, mitochondrial yes no 0 0 0 6 0 1 50.439 50.516 3 0.0021497 14168 20230619_1886_Aki_TMTPro18x_K_F6 79.659 56.054 56264 57861 76937 68378 55506 64525 65149 74382 100900 81563 82460 62043 79237 73157 70457 87767 82434 79134 52267 53023 76059 68191 59646 65771 66285 75464 99963 81509 85168 64348 80614 75855 72558 87432 78734 75266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75908000 16005 1405 15165 30468 24404 24404 1 9606 Homo sapiens 0.07129355223287348 LGIHSALLDEKK Unmodified 1322.7558 0.75580056 1405 A0A384MDT9;Q86SX6 GLRX5 Glutaredoxin-related protein 5, mitochondrial yes no 0 0 1 1 0 1 48.013 48.013 4 1.3388E-09 13520 20230619_1880_Aki_TMTPro18x_K_F1 174.68 133.25 113950 100820 118040 124340 111420 103550 130550 129360 118510 136390 139270 111570 137530 97235 147680 132450 129200 113770 105450 92475 119480 123410 116540 106950 130210 130570 122320 136610 141710 114010 140720 102730 148880 131540 123690 108310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308750000 16006 1405 15166 30469 24405 24405 1 9606 Homo sapiens 0.10733288694473231 LGIIGVVNR Unmodified 939.58655 0.58655038 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;H0YI79;A0A994J6A0;A0A994J3G1;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 0 4.5 0.5 1 1 54.716 54.783 2 5.0488E-05 16089 20230619_1883_Aki_TMTPro18x_K_F4 154.09 122.81 131410 120430 127490 166640 136520 168010 154750 148150 171280 151330 140840 135500 140970 117830 150150 140160 139050 136930 121570 110580 130240 164390 141720 169260 155450 152870 172330 152340 145950 137670 144290 123340 151850 140360 133130 130100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135450000 16007 3212;3213 15167 30470;30471 24406;24407 24406 2 9606 Homo sapiens 0.11434056922416858 LGINSLQELK Unmodified 1113.6394 0.63937381 3659 P55327-2;P55327-4;P55327;P55327-7;P55327-5;P55327-6;P55327-3;H0YC42;A5Y5A3;E5RFR7;H0YC44;P55327-8 TPD52 Tumor protein D52 yes no 0 0 0 4.5 3.5 1 1 59.148 59.19 3 6.0018E-07 18148 20230619_1880_Aki_TMTPro18x_K_F1 134.84 91.332 56244 46510 47031 49687 21692 20823 22831 25314 25719 45350 46112 44102 45529 42534 38489 59008 49563 48082 51940 42613 48144 49572 24579 23403 23134 26136 26927 44683 46302 44801 46179 44764 39989 58360 47304 45789 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15703000 16008 3659 15168 30472;30473 24408;24409 24408 2 9606 Homo sapiens 0.08709970194558991 LGIQTDDK Unmodified 888.45526 0.45526144 3371 V9HW90;P00390-2;P00390-3;P00390;Q03504 HEL-75;GSR Glutathione reductase, mitochondrial yes no 0 0 0 3.8 0.748 2 2 1 45.402 45.465 2;3 0.038274 11901 20230619_1883_Aki_TMTPro18x_K_F4 52.482 26.04 310510 188120 281660 329690 362450 427320 332790 360880 461600 362740 450980 492250 527240 480790 360960 342200 638510 668430 286440 173550 290040 322250 369820 422850 341270 373260 462240 370780 466570 493120 528270 489350 385120 364420 608450 631310 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 616190000 16009 3371 15169 30474;30475;30476;30477;30478 24410;24411 24411 2 9606 Homo sapiens 0.006572017638632133 LGITQLR Unmodified 799.49159 0.49158736 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2;K7EPH2 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 3 0 1 47.159 47.239 2 0.0051616 12906 20230619_1882_Aki_TMTPro18x_K_F3 143.02 0 261500 201530 235970 263730 234850 298620 292800 261570 322350 301250 302900 320120 329440 273570 330980 371170 359510 420650 241520 185050 242060 261600 245950 298340 292680 270960 325920 302980 313050 322610 335470 289020 338360 374010 344120 398780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 405730000 16010 4109 15170 30479 24412 24412 1 9606 Homo sapiens 0.08382123451224288 LGKDPNTYFIVGTAMVYPEEAEPK Unmodified 2668.3095 0.30945541 1710 Q16531;A0A7P0TAK7;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5;Q16531-2;F5H198 DDB1 DNA damage-binding protein 1 yes no 0 0 1 8 0 1 62.467 62.493 4 0.0097321 18819 20230619_1888_Aki_TMTPro18x_K_F8 63.573 56.461 35883 27436 35008 28698 26025 32283 32779 31891 39111 39176 40109 34006 38554 27197 45135 38944 37772 39394 33160 25140 35464 28959 27962 32370 32872 32796 39524 39042 41012 34546 39662 28935 45341 38989 36222 37406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61196000 16011 1710 15171 30480 24413 24413 1 9606 Homo sapiens 0.04203305921237188 LGLDYEER Unmodified 993.47673 0.47672516 4405 Q99623;F5GY37;Q99623-2;J3KPX7;F5GWA7;B4DW05;A0A976LZI3;A0A7I2V5F0;F5H3X6 PHB2 Prohibitin-2 yes no 0 0 0 1.5 0.5 1 1 47.028 47.066 2 0.0019297 13063 20230619_1881_Aki_TMTPro18x_K_F2 134.81 80.261 1264900 1047000 1143900 1283600 1358800 1508000 1583700 1547400 1709200 1578800 1712700 1678800 1835900 1481200 1592800 1656200 1784100 1776100 1168800 960490 1176400 1279900 1400600 1508700 1587200 1578800 1733900 1597100 1762100 1693200 1857800 1544200 1634800 1668200 1705200 1685700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1966799999.9999998 16012 4405 15172 30481;30482 24414;24415 24415 2 9606 Homo sapiens -0.02027413207429163 LGLEALAANHQQLFTDGR Unmodified 1953.0068 0.0068232975 3046 H0YHS6;Q9Y2Z4 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial yes no 0 0 0 8 0 1 58.248 58.295 3 4.9436E-60 17065 20230619_1888_Aki_TMTPro18x_K_F8 308.12 289.34 76458 63614 74263 80587 79969 92602 79502 79815 87031 95972 97933 97075 108040 88766 99531 117300 105970 111810 70690 58377 75746 80131 82642 92425 80452 82855 88743 96157 100410 98260 109520 93357 101820 117050 101370 106240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46295000 16013 3046 15173 30483 24416 24416 1 9606 Homo sapiens 0.06844015878277787 LGLEGCQR Unmodified 931.45455 0.45454993 4048 Q5RKV6 EXOSC6 Exosome complex component MTR3 yes yes 0 0 0 4.5 0.5 1 1 39.71 39.776 2 0.010108 9407 20230619_1885_Aki_TMTPro18x_K_F5 115.69 81.839 76023 54730 73633 65378 80065 79938 81633 81488 98911 89001 88831 87352 101430 80929 78312 100250 173670 99365 70225 50224 75034 65381 82657 79792 82756 83317 99392 89518 92130 88562 102120 84745 85380 100310 164730 94659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130240000 16014 4048 15174 30484;30485 24417 24417 1 9606 Homo sapiens -0.013919161568310301 LGLELGK Unmodified 728.44324 0.44324019 3683;2257 Q53FW2;P60891;B1ALA9;A0A2R8Y7H4;A0A6Q8PHK9;B1ALA7;B2R860;P11908;A0A140VK41;P11908-2;D3YTJ7;A6NMS2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 0 0 7.5 0.5 1 1 54.284 54.351 2 0.037414 15485 20230619_1887_Aki_TMTPro18x_K_F7 91.906 0 531070 434790 452710 507910 525690 605460 532920 504760 620650 642610 703600 723510 730210 628060 628070 775710 741460 767420 490470 398690 467850 508150 540960 602580 539640 526420 630800 644610 719200 727670 739660 658710 647550 776260 708510 728890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2171600000 16015 3683;2257 15175 30486;30487 24418;24419 24418 2 9606 Homo sapiens 0.06815629811342205 LGLENAEALIR Unmodified 1197.6717 0.67173657 560 A0A024R983;P10155;P10155-3;P10155-5;P10155-4;P10155-2 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 0 0 7 0.816 1 1 1 59.603 59.651 2 7.2418E-05 17951 20230619_1886_Aki_TMTPro18x_K_F6 141.95 101.95 256780 240470 250320 275740 274220 318920 301100 289840 305830 339440 308900 330020 364970 300840 318830 411520 326750 389830 237600 220370 255380 276160 283750 318570 302180 299450 311760 340070 319410 334530 368450 317180 326010 410240 313000 370260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139440000 16016 560 15176 30488;30489;30490 24420 24420 1 9606 Homo sapiens 0.08080757597554111 LGLGEGAEEK Unmodified 1001.5029 0.50293991 1074 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;P18754-2;C9JW69 RCC1 Regulator of chromosome condensation yes no 0 0 0 3 0 1 46.828 46.906 3 0.023362 12685 20230619_1882_Aki_TMTPro18x_K_F3 48.998 24.488 100770 78003 89250 98112 116720 125040 117140 121170 142170 116180 112060 96386 122360 105560 113190 129840 119030 118780 93062 71595 92093 97777 119110 124310 118830 123860 142190 117150 116740 99169 124150 109870 115680 129420 113830 112930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134670000 16017 1074 15177 30491 24421 24421 1 9606 Homo sapiens 0.002248559640520398 LGLGGNAPVSIPQQSQSVK Unmodified 1879.0163 0.016325351 1600 Q6DHZ8;B2RBM8;A0A669KBJ7;Q9H2P0;A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein yes no 0 0 0 3 0 1 55.074 55.115 4 0.0002242 16399 20230619_1882_Aki_TMTPro18x_K_F3 73.057 54.461 22319 17239 23760 23821 24566 29672 26669 23837 29315 23094 29544 26773 25325 22043 32321 26821 27116 26994 20642 15839 24034 23584 25525 29413 26848 24746 29690 23508 30114 26871 26310 23141 32426 26905 25994 25637 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24770000 16018 1600 15178 30492 24422 24422 1 9606 Homo sapiens 0.11197784163823599 LGLGHNQIR Unmodified 1006.5672 0.56721192 1978 B4DQD6;B4DDN7;B4DNL4;A6NLG9;Q8NAB7;B4DDQ2;B3KS75;Q53HU6;Q53FI4;A8K7E0;P21810 BGN Biglycan yes no 0 0 0 2 0 1 35.913 35.97 3 2.7828E-06 8082 20230619_1881_Aki_TMTPro18x_K_F2 150.4 95.85 30713 22845 29497 29234 31172 30668 36946 35088 44743 42970 48351 55485 44227 38439 47012 40439 50707 49941 28374 20976 30089 29028 32381 31014 37153 35757 45268 43373 49314 55130 45407 40319 47922 41163 48475 47336 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22012000 16019 1978 15179 30493 24423 24423 1 9606 Homo sapiens 0.0641910063151272 LGLGIDEDEVAAEEPNAAVPDEIPPLEGDEDASR Unmodified 3531.6377 0.63766166 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 0 1 0 1 63.555 63.555 4 1.3317E-15 19995 20230619_1880_Aki_TMTPro18x_K_F1 126.52 120.56 7856.9 5456 5382.9 8699 6343.1 7186 5738.3 8185.5 7366.8 7023.6 7114.5 7471 8657 7687.5 9235.3 9713 7666.2 10974 7239.2 5023.8 5707 8490.3 6507.9 7399.3 5878.1 8259.1 7406 7173.2 7384.5 7577.7 8814.5 8031 9298.3 9796.2 7373.1 10398 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 302760000 16020 751 15180 30494 24424 24424 1 9606 Homo sapiens -0.026891667261679686 LGLGLEFQA Unmodified 946.51238 0.51238239 1286 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 0 5.5 0.5 1 1 64.578 64.623 2 0.0033837 20177 20230619_1886_Aki_TMTPro18x_K_F6 97.596 84.543 107930 100020 102910 131390 110020 123630 132030 140490 149020 115150 136840 113860 129240 106350 138470 125330 108920 121270 99844 91787 105250 129980 114330 125960 132370 141680 150210 117730 140520 115530 132510 110970 138950 125470 104580 115180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 625460000 16021 1286 15181 30495;30496 24425;24426 24426 2 9606 Homo sapiens 0.03698669040238656 LGLGTAYIHGMK Unmodified 1259.6696 0.66962808 1110 A0A0S2Z4Y5;Q5QPK2;H0Y368;O60762;A0A804HIK9;A0A804HIB3;A0A0S2Z4U1;Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes no 0 0 0 4 0 1 52.442 52.466 3 7.1688E-05 15156 20230619_1883_Aki_TMTPro18x_K_F4 114.86 79.975 44456 40074 40978 46568 44025 46989 47011 47145 59405 46523 47890 48193 48681 41227 51557 56329 54410 63099 41107 36733 41994 46507 45582 47501 47604 48144 59322 47126 49725 48637 49807 43570 52564 56719 52092 59828 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20361000 16022 1110 15182 30497 24427 24427 1 9606 Homo sapiens 0.05018005588112828 LGLHQQGSEPSYLDR Unmodified 1698.8325 0.83254733 922 U3KQC1;A0A0A0MQU0;Q9BV38 WDR18 WD repeat-containing protein 18 yes no 0 0 0 5 0 1 42.913 42.996 3 0.022866 10782 20230619_1885_Aki_TMTPro18x_K_F5 53.374 41.683 158150 132480 126640 170560 158090 195670 174540 153500 261870 151440 181920 169560 167200 113500 150730 175010 201230 175910 146020 121590 132050 169320 162570 194920 177540 159790 258200 153970 189630 169520 170230 122300 156470 174840 191880 167160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176840000 16023 922 15183 30498 24428 24428 1 9606 Homo sapiens 0.01108435453011225 LGLHSLR Unmodified 794.47627 0.47627165 258 P84077;A0A024R3Q0;A0A8V8TQC0;A0A8V8TNZ5;P61204;A0A024R0Y6;B4DN70;B4DEB9;B4DJC8;B4E190;P61204-2;H0YGG7 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 0 0 3 0 1 38.212 38.266 2 0.027217 8868 20230619_1882_Aki_TMTPro18x_K_F3 96.51 10.424 123310 102270 117030 120650 130550 147030 130300 129650 160490 79755 85126 67299 64170 57959 125180 80893 91896 60152 113980 93783 119630 120690 134610 146270 132290 132320 158510 83061 89970 68698 69098 61268 124130 79914 88027 57469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64474000 16024 258 15184 30499 24429 24429 1 9606 Homo sapiens 0.07081256654032586 LGLIPIHADPR Unmodified 1200.6979 0.69789175 1354 A0A2R8YEY5;A0A2R8YEZ4;Q96HT3;A0A2R8Y5D3;O15160-2;O15160;D6RDJ3;E7EQB9;H0Y723;B4DEC2;A0A2R8Y8D6 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes no 0 0 0 1.5 0.5 1 1 51.054 51.054 3 0.00030853 14773 20230619_1880_Aki_TMTPro18x_K_F1 101.93 76.492 19085 19429 20068 20103 24418 21511 21193 22045 27826 20426 19890 23005 22175 19459 20388 28273 22879 25833 17682 17783 20361 20279 24898 21682 21760 22441 27646 20821 20902 23125 22487 20647 20946 28108 21887 24552 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55170000 16025 1354 15185 30500;30501 24430;24431 24430 2 9606 Homo sapiens 0.10557071559674114 LGLNCAIYATIPVYK Unmodified 1694.9066 0.90656389 395 A0A024R6H0;Q9P2I0;B3KMI0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes no 0 0 0 5 0 1 63.085 63.132 3 0.00020491 19340 20230619_1885_Aki_TMTPro18x_K_F5 92.856 77.884 39532 25529 27787 36579 34295 38591 44284 37882 33650 39542 38921 36380 37629 29846 39024 37168 32295 43133 36416 23484 29365 36037 35375 38841 43720 38813 35118 39756 39631 36858 38482 31416 39281 37570 31039 40865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25010000 16026 395 15186 30502 24432 24432 1 9606 Homo sapiens 0.08690687290936694 LGLPDYHK Unmodified 941.49707 0.49706667 730 P25440-2;P25440;P25440-3;A0A0G2JK44;A0A140T9E9;H0Y6K2;A0A024RCR5;X5CF57;A0A140T9V2;A0A0G2JHL0;A0A140T9F7;U3KQA6;E9PIQ3;A0A140T9X8;H0Y799 BRD2 Bromodomain-containing protein 2 yes no 0 0 0 8 0 1 47.404 47.462 3 0.02105 12431 20230619_1888_Aki_TMTPro18x_K_F8 67.563 36.191 80024 71307 79824 72559 60940 71542 70771 73593 70516 72796 78053 63982 79004 64882 80017 90975 86501 70865 74036 65287 80770 73234 65078 72500 70851 75018 72163 73336 79695 65494 80640 68266 81763 89849 82592 67578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51039000 16027 730 15187 30503 24433 24433 1 9606 Homo sapiens 0.02397802243035585 LGLPGDEVDNK Unmodified 1155.5772 0.57716749 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 3 0 1 51.769 51.835 2 0.00023774 14993 20230619_1882_Aki_TMTPro18x_K_F3 140.16 88.818 64705 68137 77624 79121 90481 75501 86735 70590 75082 68527 62636 45080 52840 36821 102180 35112 53987 44553 60037 62424 77953 78973 92586 76600 87288 72461 76674 68659 64423 46543 56479 38247 99994 36060 52055 42252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26021000 16028 3758 15188 30504 24434 24434 1 9606 Homo sapiens 0.005601990555760494 LGLPPLTPEQQEALQK Unmodified 1760.9672 0.96724989 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8;A0A0J9YVR6;A0A0J9YWM1;E9PN18;E9PMU7;A0A0J9YXC6;A0A994J6K6 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 0 0 6.5 0.5 1 1 61.014 61.064 3 1.0519E-19 18199 20230619_1887_Aki_TMTPro18x_K_F7 212.17 196.62 130740 115200 121520 124070 112760 137160 142940 134070 135830 137660 130310 122540 164670 119040 130180 137010 134720 137970 120880 105530 124130 124800 118700 137640 142160 137290 138630 138470 135410 125000 165180 123990 133270 137440 128880 131030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1047499999.9999999 16029 1044 15189 30505;30506 24435 24435 1 9606 Homo sapiens 0.11720495874897097 LGLQNDLFSLAR Unmodified 1345.7354 0.73539946 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;A0A8V8TQ95;B7Z1H4;B7Z1V9 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 2.67 0.471 1 2 62.803 62.826 2;3 4.659E-05 19891 20230619_1881_Aki_TMTPro18x_K_F2 149.94 122.69 80794 74124 78929 82797 71474 83244 87311 82958 94558 81948 91275 89716 95256 80885 88774 97415 91685 93658 74751 67914 80254 82941 75289 84150 87347 84776 95739 83133 93975 90468 96783 84590 90595 97399 87709 88989 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104790000 16030 2933 15190 30507;30508;30509 24436;24437 24436 2 9606 Homo sapiens 0.07636118034656647 LGLQSLR Unmodified 785.47594 0.4759373 3472 P18085;C9JAK5;U3KQF2 ARF4 ADP-ribosylation factor 4 yes no 0 0 0 3 0 1 47.365 47.444 2 0.02054 12968 20230619_1882_Aki_TMTPro18x_K_F3 104.45 37.413 495100 435680 436380 432610 509360 666040 539450 532630 729800 220140 170340 121920 126720 105300 350600 162470 144460 102860 457570 398840 449420 440400 525410 652550 547530 544840 708770 237350 199300 128040 141450 112210 340150 159630 139930 98479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 342670000 16031 3472 15191 30510 24438 24438 1 9606 Homo sapiens 0.0746183693418061 LGLQYSQGLVSGSNAR Unmodified 1648.8533 0.85328277 2898;4664 E7ERK9;Q9UI10;Q9Y3W7;Q9HBP7;Q9UI10-3;Q9UI10-2;Q71US4;B4DUP5 EIF2B4;DKFZp586J0119 Translation initiation factor eIF-2B subunit delta no no 0 0 0 3.5 0.5 1 1 52.614 52.655 3 1.4771999999999998E-19 15190 20230619_1883_Aki_TMTPro18x_K_F4 209.56 184.17 54393 38543 45045 50862 50666 56784 55145 51075 56984 52890 52353 53090 65245 49702 51552 69168 67052 71803 50182 35407 46658 50416 52326 56831 55388 52638 57779 53377 54498 53810 65510 52447 53615 69279 64038 68153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135380000 16032 2898;4664 15192 30511;30512 24439 24439 1 9606 Homo sapiens 0.05481025832659725 LGLSDNEIQR Unmodified 1143.5884 0.58840088 1039 A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160;Q14160-3;Q5T0G3;A8K883;Q9BTT6-2;Q9BTT6 SCRIB;LRRC1 Protein scribble homolog;Leucine-rich repeat-containing protein 1 yes no 0 0 0 3 0 1 45.623 45.699 2 0.0053952 12154 20230619_1882_Aki_TMTPro18x_K_F3 106.88 86.398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16033 1039 15193 30513 24440 24440 1 9606 Homo sapiens 0.022350211497041528 LGLSTLGELK Unmodified 1029.607 0.60701105 861 Q6FGS1;Q53GA0;A0A087WYR3;O43399;O43399-5;O43399-7;Q68E05;O43399-2;O43399-4;O43399-3;A0A087WZ51;Q5J908;B4DDV4;O43399-6 TPD52L2;DKFZp686A1765 Tumor protein D54 yes no 0 0 0 1 0 1 61.116 61.116 3 8.4047E-06 18909 20230619_1880_Aki_TMTPro18x_K_F1 155.42 139.2 114780 99630 113220 113370 108410 133320 137780 138660 153530 68004 68036 55591 57452 46653 113390 65772 56679 40209 106160 91317 115110 113670 113880 133380 137650 139380 151790 72268 73412 56811 61602 49407 110930 64525 54664 38522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145290000 16034 861 15194 30514 24441 24441 1 9606 Homo sapiens 0.09339182791563871 LGLTDINEAYVETLK Unmodified 1677.8825 0.88251721 2522 B7ZA52;B4DL29;B4DNY2;B4DZK0;Q9Y4P1-4;Q9Y4P1-6;Q9Y4P1;Q9Y4P1-2;C9JIK8;Q9Y4P1-3 ATG4B Cysteine protease ATG4B yes no 0 0 0 6 0 1 62.987 63.035 3 0.00089769 19497 20230619_1886_Aki_TMTPro18x_K_F6 76.358 56.261 135490 109770 144240 155040 109250 139320 137090 142580 147290 208330 194930 184780 226730 185500 175910 227500 216280 243270 125340 100860 145350 152620 117110 142090 137060 147200 151670 206210 199030 188710 227930 193650 182290 228650 206740 230790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 677770000 16035 2522 15195 30515 24442;24443 24443 2 9606 Homo sapiens 0.07069125338284721 LGLTEAHK Unmodified 867.48142 0.48141661 722 A0A1U9X8D3;A0A1U9X8D1;A0A1U9X8C7;A0A1U9X8C1;A0A0G2JHC2;A0A024RCJ8;Q6NYC8;Q6NYC8-2 hCG_1821276;PPP1R18 Phostensin yes no 0 0 0 6.5 0.5 1 1 40.871 40.951 3 0.0018431 9664 20230619_1887_Aki_TMTPro18x_K_F7 99.802 45.924 128070 95700 126720 153490 174470 198590 166210 177480 197470 135070 141700 132280 156990 121860 142710 152430 157550 141030 118350 88098 129740 150710 177310 196780 168990 181580 197030 138820 148620 134180 159030 127710 146230 152030 150480 134130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93505000 16036 722 15196 30516;30517 24444 24444 1 9606 Homo sapiens 0.0423751572599258 LGLTEDQFIR Unmodified 1190.6295 0.62953741 294 A0A087WYJ2;A0A024R4F4;A0A2R8Y705;Q308M6;M0R2B7;P28340;M0QZR8;Q59FA0;A0A2R8Y7K6 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit yes no 0 0 0 4.5 0.5 1 1 56.105 56.141 2 0.00036059 16320 20230619_1885_Aki_TMTPro18x_K_F5 129.63 94.817 76325 63388 75482 67938 60225 64062 68314 76587 76417 88027 85013 88785 92735 82701 89417 93148 92527 97649 70576 58077 76458 68259 63969 65399 68736 77657 77806 88333 87197 89875 94265 86056 91176 93686 88535 92681 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51485000 16037 294 15197 30518;30519 24445 24445 1 9606 Homo sapiens 0.041847821891678905 LGLTEIR Unmodified 800.4756 0.47560295 2904 E7EVX8;Q8WWY3;B4DWW8;Q8WWY3-4 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes no 0 0 0 7 0 1 48.45 48.536 2 0.068833 12818 20230619_1887_Aki_TMTPro18x_K_F7 77.72 6.6529 120310 96559 107470 125440 119230 130920 132800 125240 177000 139010 150420 151580 156030 143290 153570 158050 166280 173930 111130 88644 110530 124350 123380 131840 134420 128760 176630 140240 155840 153050 159050 148830 156930 159470 159020 165000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238380000 16038 2904 15198 30520 24446 24446 1 9606 Homo sapiens 0.06738417214330639 LGLTEIRK Unmodified 928.57057 0.57056597 2904 E7EVX8;Q8WWY3;B4DWW8;Q8WWY3-4 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes no 0 0 1 2 0 1 46.349 46.429 3 0.062185 12789 20230619_1881_Aki_TMTPro18x_K_F2 47.349 12.418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16039 2904 15199 30521 24447 24447 1 9606 Homo sapiens 0.10342350685516521 LGMENDDTAVQYAIGR Oxidation (M) 1767.8098 0.80976297 958 A0A0A0MSZ9;Q05048;A3KFI9;B4DDG3 CSTF1 Cleavage stimulation factor subunit 1 yes no 0 1 0 3 0 1 52.12 52.185 3 2.427E-06 15140 20230619_1882_Aki_TMTPro18x_K_F3 115.63 105.01 94541 72136 106790 97173 94165 115550 116580 98003 128500 72913 82196 80860 90767 72644 83196 83948 82412 87547 87476 66262 107240 96318 99464 114990 116560 100730 128190 75406 86893 81500 91990 75827 84694 84384 78894 83096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48750000 16040 958 15200 30522 24448 24448 537 1 9606 Homo sapiens -0.04342951726789579 LGMFDLHYCDK Oxidation (M) 1413.6057 0.6057072 2785 CON__P34955 yes yes 0 1 0 6.5 0.5 1 1 52.801 52.875 3 0.0010725 14885 20230619_1887_Aki_TMTPro18x_K_F7 87.001 71.97 + 145370 177960 216010 148280 434710 527860 326260 343010 401550 199530 235630 302030 196270 203710 217630 218020 239100 340830 135370 162540 216570 157260 431610 500580 337330 358900 397650 212930 248340 298470 202940 214080 222160 225700 229270 322040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190630000 16041 2785 15201 30523;30524 24449;24450 24450 1661 2 -0.08455142631191848 LGMLSPEGTCK Oxidation (M) 1207.5577 0.55769437 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 1 0 7 0.816 1 1 1 47.908 47.983 2 0.0051613 12658 20230619_1887_Aki_TMTPro18x_K_F7 81.95 57.028 93906 79849 93394 91202 81614 83682 93094 89170 92181 117870 134840 113090 127410 103170 112490 151930 125570 124060 86849 73194 94711 91124 85940 85370 93242 91507 95729 117390 135850 114840 129510 109310 115600 150210 120010 118130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 93920000 16042 3606 15202 30525;30526;30527 24451;24452 24452 2279 2 9606 Homo sapiens -0.037782165511998755 LGMLSPEGTCK Unmodified 1191.5628 0.56277975 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 7.5 0.5 1 1 53.087 53.16 3 4.3559E-07 14977 20230619_1887_Aki_TMTPro18x_K_F7 166.55 139.22 287400 223900 250290 230210 162060 230600 234130 214410 251950 318260 272140 259130 305860 261340 279540 348950 283980 286220 265390 205110 255930 232170 177750 232810 232570 222980 256820 314220 279680 265880 309840 274100 285360 345550 271680 272510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 479490000 16043 3606 15202 30528;30529 24453;24454 24453 2 9606 Homo sapiens -0.025339126885910446 LGNDFHTNK Unmodified 1044.4989 0.49885759 3066 H3BNC9;P08708;H0YN88;A0A075B716;H0YN73;A0A0J9YYC4 RPS17 40S ribosomal protein S17 yes no 0 0 0 6 0.816 1 1 1 40.296 40.38 3 4.194E-05 9378 20230619_1887_Aki_TMTPro18x_K_F7 147.74 82.907 1616900 1150000 1450700 1441800 1806800 1812400 1756800 1761200 2313600 1797600 1723900 1564600 1967800 1571300 1444100 1907100 2053600 1663700 1492600 1055900 1492600 1437100 1847100 1803800 1790800 1803100 2301200 1809100 1805400 1600100 1976000 1638800 1513600 1896200 1956300 1584200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5747000000 16044 3066 15203 30530;30531;30532 24455;24456;24457 24456 3 9606 Homo sapiens -0.021611887390008633 LGNFFSPK Unmodified 908.4756 0.47560295 707 P46940;A4QPB0;A0A024RC65;A0A0J9YXZ5;Q6P1N4;Q05DN7;Q5FWG8 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 4.5 0.5 1 1 59.091 59.119 2;3 2.3912E-05 17958 20230619_1883_Aki_TMTPro18x_K_F4 134.15 86.302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16045 707 15204 30533;30534 24458;24459 24458 2 9606 Homo sapiens 0.017704172143339747 LGNHLEDR Unmodified 952.47264 0.47264284 4306 Q92793-2;Q92793;B4E3L4;I3L466;B5A244;I3L3I5 CREBBP CREB-binding protein yes no 0 0 0 2.5 0.5 1 1 32.633 32.699 3 0.0098638 6671 20230619_1882_Aki_TMTPro18x_K_F3 66.504 41.686 74122 39771 95474 87523 118210 107330 99176 106730 89776 72198 126010 128520 81688 91897 115830 43225 143130 113570 68555 36848 95470 84664 120190 106980 100900 108150 93281 76504 125720 126580 86563 93390 118260 48410 136480 107230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18870000 16046 4306 15205 30535;30536 24460 24460 1 9606 Homo sapiens -0.005494579104833974 LGNIEFKPESR Unmodified 1288.6776 0.67755023 2174 E9PDF6;B0I1S9;O43795-2;O43795;E7EQD9;Q05CR5 MYO1B Unconventional myosin-Ib yes no 0 0 1 8 0 1 49.152 49.224 3 0.00021169 13175 20230619_1888_Aki_TMTPro18x_K_F8 124.38 73.591 311210 231880 306480 324380 302580 356950 388750 359450 395130 345960 367300 337400 418170 291630 335130 401080 319510 341880 287570 213100 311870 320360 317000 358370 387070 366750 400920 350150 380150 341640 420730 308340 341760 397790 306010 325260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 608890000 16047 2174 15206 30537 24461 24461 1 9606 Homo sapiens 0.04475856109229426 LGNPIVPLNIR Unmodified 1204.7292 0.72919187 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4.5 0.5 1 1 58.977 59.005 2 7.4919E-06 17477 20230619_1885_Aki_TMTPro18x_K_F5 191.78 129.78 384870 320010 348190 373990 351120 392540 400910 411090 444770 355230 324280 280260 328060 280130 355270 367640 357350 283060 355630 293430 356970 373600 365960 395980 402690 417140 445650 359860 338390 288200 336080 293530 360940 363320 341370 270020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 922610000 16048 3758 15207 30538;30539 24462;24463 24463 2 9606 Homo sapiens 0.13501644593770834 LGNPTDR Unmodified 771.38752 0.38751622 3352 Q53XM7;O95292;E5RK64;O95292-2;Q59EZ6 VAPB Vesicle-associated membrane protein-associated protein B/C yes no 0 0 0 3.5 0.5 1 1 34.095 34.155 2 0.037427 7178 20230619_1883_Aki_TMTPro18x_K_F4 91.9 44.157 109950 65081 142300 142410 160800 166330 140510 168550 159130 118560 181190 202330 152350 150290 173400 87796 198850 199250 101740 60259 142120 137660 164850 166290 143580 170660 161710 125050 183790 199650 157550 153460 176870 95764 190020 188070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 83360000 16049 3352 15208 30540;30541 24464 24464 1 9606 Homo sapiens -0.007322033762875435 LGNSCEFR Unmodified 981.43381 0.43381449 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;A0A3B3ISX1;A0A3B3ITG9;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 5 0 1 40.513 40.601 2 1.9237E-05 9781 20230619_1885_Aki_TMTPro18x_K_F5 138.78 124.27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16050 1718;4020 15209 30542 24465 24465 1 9606 Homo sapiens -0.057645065365022674 LGNSHQPEKPLVR Unmodified 1473.8052 0.80521036 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2;Q05D78 MRE11A Double-strand break repair protein MRE11A yes no 0 0 1 2 0 1 36.768 36.826 4 0.0020415 8431 20230619_1881_Aki_TMTPro18x_K_F2 87.498 71.743 47591 37892 48038 46792 53828 48388 45249 49842 46593 53698 67313 50623 46974 35414 64765 33566 39597 35581 44002 34769 48817 46560 55131 48877 46217 50908 48222 53932 67114 51026 49350 36962 63983 33986 38102 33789 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39470000 16051 229 15210 30543 24466 24466 1 9606 Homo sapiens 0.08725996703265082 LGNSLLR Unmodified 771.46029 0.46028724 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 3 0 1 46.2 46.278 2 0.046609 12459 20230619_1882_Aki_TMTPro18x_K_F3 87.754 10.908 182770 154000 166490 210270 190010 226810 214410 202110 242150 163030 174540 164380 181860 156510 190740 202630 242660 188270 168910 141420 171140 207810 196340 227430 215530 207220 242170 167080 182570 166720 185930 164110 196700 202050 231300 179170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104050000 16052 349;3906 15211 30544 24467 24467 1 9606 Homo sapiens 0.06541550417136932 LGNTTVICGVK Unmodified 1160.6223 0.62234354 1760 A0A8I5KRX4;A0A8I5KRG4;A0A8I5KVC8;Q96B26;A0A8I5QJI7;Q5JXM0 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 yes no 0 0 0 2 0 1 51.296 51.341 2 0.0054701 15031 20230619_1881_Aki_TMTPro18x_K_F2 103.26 84.64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16053 1760 15212 30545 24468 24468 1 9606 Homo sapiens 0.04845726317103072 LGNYAGAVQDCER Unmodified 1451.6463 0.64632646 1650 A0A7I2V697;A0A7I2V4T9;A0A7I2V2U2;A0A7I2V5Z3;A0A7I2V588;O43765;B4DEA6;K7EMD6 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 0 0 3.8 0.748 2 2 1 45.439 45.502 2;3 1.0504E-20 12068 20230619_1882_Aki_TMTPro18x_K_F3 220.5 198.51 183770 157870 195250 191700 157250 191020 199470 218720 257310 237340 230910 196580 204100 183990 217350 256680 248800 238520 170070 144800 196810 190900 167660 193820 200560 221930 257730 237640 236770 201180 209920 194030 222740 255630 237670 226780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 431290000 16054 1650 15213 30546;30547;30548;30549;30550 24469;24470 24469 2 9606 Homo sapiens -0.061430849871612736 LGPASAADTGSEAKPGALAEGAAEPEPQR Unmodified 2747.3362 0.33621552 4628 Q9NYB0;A0A590UJT3 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes no 0 0 1 4 0 1 48.337 48.377 4 1.1385E-20 13266 20230619_1883_Aki_TMTPro18x_K_F4 158.61 146.87 23554 17967 22186 25655 22797 23623 31019 22999 30956 33041 32083 27554 29446 24236 26459 31399 31801 33468 21760 16515 22687 25240 23832 24029 30773 23834 31592 32688 32718 28116 29993 25504 27281 31536 30387 31760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150200000 16055 4628 15214 30551 24471 24471 1 9606 Homo sapiens 0.03244086066115415 LGPDDPNVAK Unmodified 1024.5189 0.51892433 3808;4492 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5;Q9H0B6;Q9H0B6-2;A8MZ87 KLC1;KNS2;KLC2 Kinesin light chain 1;Kinesin light chain 2 no no 0 0 0 3.5 0.5 1 1 45.389 45.449 3 0.0026705 11938 20230619_1883_Aki_TMTPro18x_K_F4 79.986 61.674 114870 81826 106100 115670 122120 118380 112540 105450 166030 137400 141980 141310 155190 137470 142040 150110 140260 147910 106070 75225 108770 114020 125320 119240 115660 109520 165110 137390 147360 143140 157380 142570 144620 150520 134270 140480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 299980000 16056 3808;4492 15215 30552;30553 24472 24472 1 9606 Homo sapiens 0.007645622009249564 LGPLLDILADSR Unmodified 1281.7293 0.72925145 1401 Q13724;A0A384MDR6;Q58F09;Q13724-2;A0A3B3IRK6;A0A3B3IRW2;A8K9K4 MOGS;GCS1 Mannosyl-oligosaccharide glucosidase yes no 0 0 0 8 0 1 65.521 65.541 2 0.0068148 20181 20230619_1888_Aki_TMTPro18x_K_F8 78.342 47.772 10692 9960.8 11841 10049 9858.2 10691 8594.3 10692 11452 12116 10637 13287 12563 12469 14758 13429 14084 15878 9904 9117.8 11888 10161 10364 10769 8842.1 10956 11486 12203 11062 13398 12878 12935 14924 13621 13495 15049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20512000 16057 1401 15216 30554 24473 24473 1 9606 Homo sapiens 0.09965599803126679 LGPNDQYK Unmodified 933.4556 0.45559579 600 A0A024R9Z0;O00483 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes no 0 0 0 5.5 0.5 1 1 43.092 43.18 2 0.0062673 10865 20230619_1886_Aki_TMTPro18x_K_F6 125.49 73.805 422200 322920 418140 492060 619490 639550 623630 636670 761160 430480 557240 568720 498870 477410 496720 490100 711110 636500 390210 297050 428640 484670 627430 635230 632410 645010 758220 450870 578870 568190 511640 496040 516870 500540 677800 603270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 363080000 16058 600 15217 30555;30556 24474;24475 24475 2 9606 Homo sapiens -0.01379378516298857 LGPNYLHIPVNCPYR Unmodified 1811.9141 0.91410889 1490 B4DWK8;A0A384P5Q0;P04040;Q8TAK2 CAT Catalase yes no 0 0 0 4 0 1 53.65 53.67 3 0.025723 15680 20230619_1883_Aki_TMTPro18x_K_F4 50.843 33.354 67941 54187 69853 69816 66379 89732 74855 74538 102520 77650 85528 84131 95581 80699 82119 85153 96365 101240 62828 49742 70769 69473 69623 88824 75835 77277 102120 78588 88966 85013 96606 83624 84541 86394 92097 95972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19692000 16059 1490 15218 30557 24476 24476 1 9606 Homo sapiens 0.040628396112424525 LGPSDYFGEIALLMNRPR Unmodified 2048.0513 0.051330649 2223 P10644;B2R5T5;Q68DQ4 PRKAR1A;DKFZp779L0468 cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 0 0 1 4 0 1 63.92 63.928 3 1.7796E-24 20006 20230619_1883_Aki_TMTPro18x_K_F4 215.79 189.83 19201 16107 16891 18949 13538 17394 18862 19270 20389 18328 19590 22798 21093 20449 27057 20672 18857 24541 17740 14769 17317 18887 14494 17747 18761 19537 20644 18710 20243 22852 21771 21174 26922 21009 18161 23248 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10039000 16060 2223 15219 30558 24477 24477 1 9606 Homo sapiens 0.06922703700161037 LGPVVYVLDLADR Unmodified 1428.7977 0.79766537 4619 Q9NX47 MARCH5 E3 ubiquitin-protein ligase MARCH5 yes yes 0 0 0 8 0 1 65.504 65.523 2 0.063704 20130 20230619_1888_Aki_TMTPro18x_K_F8 76.332 43.211 19719 14461 20388 23043 16949 20880 24844 23753 28428 28514 20251 23606 28087 24244 22718 32333 32602 35872 18227 13312 20626 22528 18104 21328 24695 24198 28457 28415 21529 24202 28182 25428 23794 32525 31120 34022 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13467000 16061 4619 15220 30559 24478 24478 1 9606 Homo sapiens 0.10041844382976706 LGQALTEVYAK Unmodified 1191.6499 0.6499385 292 Q00341;A0A024R4E5;B2R5V9;B4DKR8;H7C0A4;Q5HYC5 HDLBP;DKFZp686L08115 Vigilin yes no 0 0 0 4.5 3.5 1 1 58.696 58.719 2;3 0.00021109 17956 20230619_1880_Aki_TMTPro18x_K_F1 145.89 84.107 355060 191340 332190 322080 340860 254280 329330 332940 309800 392980 383490 324480 382750 308170 385700 461990 327830 331990 327440 176540 339220 313630 352030 264270 332370 336310 320130 391580 389660 332360 390560 326490 389420 454300 314250 316690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 276590000 16062 292 15221 30560;30561 24479;24480 24479 2 9606 Homo sapiens 0.0617795284897511 LGQDPYR Unmodified 847.41882 0.41881635 3474 P18583-5;P18583-9;P18583;P18583-7;P18583-4;P18583-3;P18583-10;P18583-6 SON Protein SON yes no 0 0 0 4 0 1 38.827 38.869 2 0.024502 9081 20230619_1883_Aki_TMTPro18x_K_F4 99.139 53.689 80074 68527 80649 86295 108140 114180 107050 107670 150540 87394 92645 81169 90112 71309 87496 92184 104590 84028 74068 62875 82333 86047 110150 113190 109270 109870 148390 89356 97584 82429 91939 75007 89978 91837 99761 79972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99950000 16063 3474 15222 30562 24481 24481 1 9606 Homo sapiens -0.010996303421961784 LGQDRPIK Unmodified 925.53451 0.53451481 4477 Q9BZK7;C9JLJ1;B7Z475;A0A0D9SF63;A0A1B0GVH3 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes no 0 0 1 4.5 3.5 1 1 37.936 37.929 3 0.05908 8652 20230619_1888_Aki_TMTPro18x_K_F8 56.258 15.906 584420 415800 525960 556880 629650 690370 624160 634930 849680 638700 752720 724490 721200 619630 664390 691420 844530 728790 539510 382030 540890 552430 646180 686580 636510 652490 848170 648390 775170 728220 734640 646390 686620 695750 805490 692230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 280670000 16064 4477 15223 30563;30564 24482;24483 24483 2 9606 Homo sapiens 0.06876893508660942 LGQGVLVQVSPSLVK Unmodified 1522.9083 0.90827845 1922 A3KFL5;Q13868;Q13868-3;B3KQW2 EXOSC2 Exosome complex component RRP4 yes no 0 0 0 4 0 1 61.656 61.659 3 0.014352 19043 20230619_1883_Aki_TMTPro18x_K_F4 60.918 42.303 78543 64638 84131 82852 56917 82160 73379 75322 96817 77446 85296 79325 84860 67898 79609 76945 83977 88406 72672 59326 84596 82172 61894 82925 73805 77500 96760 78258 87990 80074 86347 70937 81271 77830 80337 83830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34286000 16065 1922 15224 30565 24484 24484 1 9606 Homo sapiens 0.16774064371224995 LGQHSCLR Unmodified 969.48143 0.48143338 2474 D6RBR7;B4DFG9;Q9Y3S2 ZNF330 Zinc finger protein 330 yes no 0 0 0 8 0 1 30.554 30.57 3 0.0023396 5852 20230619_1888_Aki_TMTPro18x_K_F8 105.14 68.435 55311 37922 45465 49473 67794 76728 58790 60272 93215 27515 30267 30558 28153 24813 42256 24549 38210 26328 51017 34838 47366 49346 68520 75114 60795 61818 90293 29803 33948 30707 29509 25767 42392 24836 36516 25031 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12376000 16066 2474 15225 30566 24485 24485 1 9606 Homo sapiens -0.004528075456391889 LGQMIVDYENPLK Unmodified 1518.7752 0.77521537 4706 Q9Y2A7;Q9Y2A7-2;A0A994J4I5;A0A994J6K9 NCKAP1 Nck-associated protein 1 yes no 0 0 0 8 0 1 62.802 62.828 3 0.0070648 18992 20230619_1888_Aki_TMTPro18x_K_F8 55.724 42.846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16067 4706 15226 30567 24486 24486 1 9606 Homo sapiens 0.03657876923080039 LGQMVLSGVDTVLGK Unmodified 1515.8331 0.8330646 1189 A0A140VJN8;O60664-4;O60664-3;O60664;K7EL96;K7ERZ3 PLIN3 Perilipin-3 yes no 0 0 0 3 0 1 65.705 65.739 3 0.0073577 20855 20230619_1882_Aki_TMTPro18x_K_F3 67.115 51.85 6202.4 3849.4 5133.3 6041.7 4519.2 7536.4 5693.5 6348.6 8567.4 7783.9 6022.6 8274.2 6998.8 6071.9 8499.5 7865 8461 7573.6 5718.4 3545.6 5302.9 5935.8 4803 7470.1 5761.1 6603.6 8466.4 7806.5 6360.8 8292 7186.4 6429.2 8610.2 7861.2 8089.7 7199.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5503900 16068 1189 15227 30568 24487 24487 1 9606 Homo sapiens 0.09578138848473827 LGQSDPAPLQHQMDIYQK Oxidation (M) 2083.9997 0.99968901 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;E9PFF2;A0A0S2Z5C0;Q6MZE3 HEL107;TKT;DKFZp686J13123 Transketolase yes no 0 1 0 5.5 0.5 1 1 47.27 47.349 3 1.6152E-09 12732 20230619_1886_Aki_TMTPro18x_K_F6 124.77 111.04 145210 109340 117580 149630 125660 139110 136250 129750 292450 192870 203490 196480 213290 171610 167130 250070 225100 235640 134000 100460 122050 147580 130580 141250 141440 134950 285190 191940 213210 198580 215230 182020 174430 248950 214890 223920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 231460000 16069 3523 15228 30569;30570 24488;24489 24489 2186 2 9606 Homo sapiens 0.0010491521561561967 LGQSDPAPLQHQMDIYQK Unmodified 2068.0048 0.004774387 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;E9PFF2;A0A0S2Z5C0;Q6MZE3 HEL107;TKT;DKFZp686J13123 Transketolase yes no 0 0 0 6.5 0.5 2 2 51.731 51.807 3;4 1.3294E-18 14666 20230619_1886_Aki_TMTPro18x_K_F6 174.02 139.06 453340 357290 424800 450620 346670 440440 415210 420490 858070 607940 549260 545340 655380 517430 516590 681180 656930 691380 418880 327920 432910 447280 369580 445600 428120 435980 836120 603260 582350 555570 658960 543650 536400 681920 627430 656440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1113000000 16070 3523 15228 30571;30572;30573;30574 24490;24491;24492 24490 3 9606 Homo sapiens 0.013492190782017133 LGQSESQGPPR Unmodified 1154.568 0.56799978 3123 J3KN29;O00233;F5H5V4;F5GX23;O00233-2;F5H169 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes no 0 0 0 3.5 0.5 1 1 34.512 34.568 2 4.3168E-12 7321 20230619_1883_Aki_TMTPro18x_K_F4 225.91 181.53 58956 34103 62645 66033 87561 93799 88257 91327 91162 69158 101170 96924 94587 80303 79781 53155 114820 112380 54443 31516 63738 64371 88945 92618 89032 92850 92984 71948 102990 96546 96061 82031 83161 57255 109500 106120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99830000 16071 3123 15229 30575;30576 24493;24494 24494 2 9606 Homo sapiens -0.0031014951009638025 LGQVASSLFR Unmodified 1076.5978 0.59784335 1470 A0A384NL74;P42696;A2A2V2;P42696-2;Q5TCT4;H7C5M1 RBM34 RNA-binding protein 34 yes no 0 0 0 5 0 1 59.878 59.93 2 0.0012226 17881 20230619_1885_Aki_TMTPro18x_K_F5 110.53 68.694 108630 98617 103920 100780 126140 160860 127590 136980 164800 51820 47788 42705 45131 44026 77726 54708 55912 49366 100480 90289 106310 102430 129550 157500 129630 139230 160760 56891 54461 43922 47781 45912 77130 54584 53661 46969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15489000 16072 1470 15230 30577 24495 24495 1 9606 Homo sapiens 0.06260834225895451 LGQVSVK Unmodified 729.43849 0.43848916 3232 O15066;B4DYF2 KIF3B Kinesin-like protein KIF3B;Kinesin-like protein KIF3B, N-terminally processed;Kinesin-like protein yes no 0 0 0 8 0 1 39.709 39.698 2 0.050245 9317 20230619_1888_Aki_TMTPro18x_K_F8 86.113 14.092 154540 74553 206810 191730 302180 306440 208200 285580 213090 71262 145990 143590 75622 90047 164310 43093 185150 125660 142930 69324 207010 185290 303440 300420 215750 287170 213610 85820 150010 140760 83884 92118 165960 49083 176540 118700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295580000 16073 3232 15231 30578 24496 24496 1 9606 Homo sapiens 0.06294745668571977 LGSAVVTR Unmodified 801.47085 0.47085192 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 1.5 0.5 1 1 39.877 39.912 2 0.005101 10047 20230619_1880_Aki_TMTPro18x_K_F1 114.5 37.215 211980 163230 194530 197860 234330 232930 215840 219700 269810 242830 270030 289230 275870 228870 245650 243120 338900 288170 195810 149760 199630 197470 239680 232670 220400 225970 271780 245620 277400 289330 279990 238900 255420 246640 323000 273420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290300000 16074 3654 15232 30579;30580 24497 24497 1 9606 Homo sapiens 0.062175330715604105 LGSDMEDLR Unmodified 1034.4703 0.47025958 2790 CON__Q03247 yes yes 0 0 0 2 0 1 48.119 48.19 2 0.015639 13604 20230619_1881_Aki_TMTPro18x_K_F2 74.941 52.111 + 127190 97579 116410 124970 135140 167970 138230 128360 209110 218940 292680 389860 235490 242460 277190 322460 489370 610440 117480 89583 119510 124460 139280 165640 141400 136380 212220 221550 294550 382730 244710 259370 293120 338530 467020 576300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142540000 16075 2790 15233 30581 24498 24498 1 9606 Homo sapiens -0.04559674430470295 LGSFNWYGEQCSCGR Unmodified 1819.7406 0.74063755 4690 Q9UNI6 DUSP12 Dual specificity protein phosphatase 12 yes yes 0 0 0 2 0 1 58.351 58.365 3 0.00011209 17973 20230619_1881_Aki_TMTPro18x_K_F2 95.067 93.939 24182 20926 24563 27304 24429 25396 28922 26763 27618 23927 26426 24604 26927 19261 41140 28328 24590 28397 22372 19206 24935 27023 25481 25859 28860 27186 28149 24353 27216 24787 28099 20542 40601 28364 23714 26957 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13812000 16076 4690 15234 30582 24499 24499 1 9606 Homo sapiens -0.13644314227326504 LGSIAIQGAIEK Unmodified 1198.6921 0.69213767 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHH9;H0YEL7;P24752-2;A0A5F9ZHL7;E9PRQ6 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 8 0 1 58.064 58.111 3 0.00016179 17031 20230619_1888_Aki_TMTPro18x_K_F8 102.97 45.411 61914 56100 64103 68813 55009 61223 72808 69046 67503 72926 72076 71704 75884 69272 77860 85562 80689 84859 57305 51448 64836 68366 58299 62671 72230 70127 69280 73436 73929 72795 77455 72381 79339 85659 77204 80592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42985000 16077 1208 15235 30583 24500 24500 1 9606 Homo sapiens 0.10073928257361331 LGSISCK Unmodified 763.38982 0.38982441 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 0 1.5 0.5 1 1 45.23 45.27 2 0.074437 12241 20230619_1881_Aki_TMTPro18x_K_F2 75.189 22.553 423330 259370 455150 443150 463300 523660 435590 485510 937320 455810 535740 665640 616730 507250 518320 413090 676350 659440 391070 239190 459720 433270 480930 522210 456100 497800 908820 469710 572680 660080 622410 523800 536860 430810 645480 623790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160040000 16078 1102 15236 30584;30585 24501 24501 1 9606 Homo sapiens -0.0013349096283263862 LGSLVENNER Unmodified 1129.5728 0.57275081 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 3.5 0.5 1 1 46.559 46.62 2 7.2824E-07 12600 20230619_1882_Aki_TMTPro18x_K_F3 183.67 144.13 328660 272500 298410 329060 300900 333580 326510 331080 435430 398470 443610 421720 464820 352940 387190 541120 503900 447320 303700 249940 305860 327750 313310 336970 331150 340240 437620 399880 455420 425140 469880 376300 402370 535020 480610 426070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 556310000 16079 12 15237 30586;30587 24502 24502 1 9606 Homo sapiens 0.013147346326604747 LGSPDYGNSALLSLPGYRPTTR Unmodified 2334.1968 0.19680891 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 4.5 0.5 1 1 57.708 57.74 3 1.7065E-67 16944 20230619_1885_Aki_TMTPro18x_K_F5 305.12 282.19 171430 146070 175930 181200 161630 192580 189490 189590 165870 206760 214680 201680 247240 204750 218490 230440 224480 234700 158590 134010 178180 180280 169770 193770 188830 194350 172460 207810 219330 205170 249860 212520 223080 231380 214790 222830 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 704600000 16080 349;3906 15238 30588;30589 24503;24504;24505 24504 3 9606 Homo sapiens 0.08307838030032144 LGSSGLGSASSIQAAVR Unmodified 1559.8267 0.82673367 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;H0Y659;Q5H935 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 3 0 1 51.225 51.296 3 2.8194E-10 14699 20230619_1882_Aki_TMTPro18x_K_F3 144.18 131.01 123220 109090 120680 105900 112320 135530 133580 137500 165150 120390 131480 136190 149860 113960 145430 141980 154360 155390 113980 99843 122610 107720 118040 134870 134430 139830 164970 123140 137340 136830 152090 119850 148430 142990 147610 147450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 390830000 16081 594 15239 30590 24506 24506 1 9606 Homo sapiens 0.06921336941331901 LGSSLDWDR Unmodified 1047.4985 0.49852324 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;P26640-2 VARS Valine--tRNA ligase yes no 0 0 0 4.5 0.5 1 1 52.795 52.818 2 1.9782E-10 14997 20230619_1885_Aki_TMTPro18x_K_F5 162.59 112.46 187110 166800 197860 182730 160530 180380 192720 185340 211050 243280 221810 214290 246700 196350 234300 234200 237350 225010 173200 152810 199440 183340 170550 182770 193110 190560 214620 241820 228140 218210 250300 205220 238620 234250 226980 213860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285730000 16082 725 15240 30591;30592 24507;24508 24508 2 9606 Homo sapiens -0.023326084588461526 LGSSSLTNIPEEVR Unmodified 1500.7784 0.77838649 1151 A0A0U1RQQ9;Q6P3W7;Q9NWE9;F8VSC5 SCYL2 SCY1-like protein 2 yes no 0 0 0 5 0 1 53.517 53.588 2 1.513E-05 15295 20230619_1885_Aki_TMTPro18x_K_F5 125.36 102.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16083 1151 15241 30593 24509 24509 1 9606 Homo sapiens 0.04802843301422399 LGSTAIGIQTSEGVCLAVEK Unmodified 2032.0511 0.051055878 1160 A0A109NGN6;P28066 PSMA5 Proteasome subunit alpha type-5 yes no 0 0 0 7.5 0.5 1 1 61.81 61.844 2 0.017828 18451 20230619_1888_Aki_TMTPro18x_K_F8 90.412 74.522 6907.1 6691.5 6633.7 6471 7788.7 9701.1 11184 10062 16361 7098.3 7943.7 8435 11822 7001.7 7385.2 10705 8690 10296 6392 6122.4 6783.6 6601.8 8107 9571.6 11223 10174 16007 7392.4 8713.4 8463.4 11715 7478.2 7678.5 10664 8313 9777.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3621099999.9999995 16084 1160 15242 30594;30595 24510 24510 1 9606 Homo sapiens 0.076312391896181 LGSTAPQVLSTSSPAQQAENEAK Unmodified 2313.1448 0.14483292 3993 Q53FE8;Q9UNZ2;Q9UNZ2-5;Q53FF5;Q9UNZ2-6;Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 yes no 0 0 0 5.5 0.5 1 1 52.526 52.601 3 6.227500000000001E-54 15007 20230619_1886_Aki_TMTPro18x_K_F6 264.67 252.01 51134 38906 47953 51269 51287 59029 61163 54364 56578 69964 58208 63545 77541 55125 56281 80789 69103 75990 47237 35729 49058 50853 53273 58985 60942 56287 58069 69651 60518 64511 77451 58551 58450 80422 66041 72201 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 211670000 16085 3993 15243 30596;30597 24511;24512 24512 2 9606 Homo sapiens 0.04078629825653479 LGSTEVASNVPK Unmodified 1200.635 0.63501672 2661 B5BU99;Q9Y5A9;Q9Y5A9-2;S4R3V3 YTHDF2 YTH domain-containing family protein 2 yes no 0 0 0 7 0 1 46.842 46.93 2 2.1064E-09 12153 20230619_1887_Aki_TMTPro18x_K_F7 182.28 141.3 52872 45728 50122 47863 54868 60288 53947 52014 66365 71031 65165 71775 78560 64861 57777 91156 75112 72851 48885 41882 51199 48351 56615 59857 54836 54211 66925 70798 67523 72603 78771 68502 60259 90058 71683 69397 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41912000 16086 2661 15244 30598 24513 24513 1 9606 Homo sapiens 0.04272460980973847 LGSTVFVANLDYK Unmodified 1425.7504 0.75038083 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;M0R2T0;B4DEG4;M0QYQ7 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 2 0.816 1 1 1 62.008 62.021 3 3.7222E-12 19492 20230619_1881_Aki_TMTPro18x_K_F2 193.28 167.9 334270 196820 279680 326930 265810 393070 352440 333050 402890 404030 376220 408580 442550 413080 374070 473630 486660 558180 308130 181470 288890 320040 280480 390620 351810 346320 406670 404810 390360 414690 446710 429180 388370 479370 465040 529000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 855990000 16087 3631 15245 30599;30600;30601 24514 24514 1 9606 Homo sapiens 0.05453565111997705 LGTAMSHEIR Oxidation (M) 1129.555 0.55499226 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;E7EPI4;E7EVM4 L1CAM Neural cell adhesion molecule L1 yes no 0 1 0 5 0.816 1 1 1 32.705 32.764 3 0.00040089 6660 20230619_1885_Aki_TMTPro18x_K_F5 100.92 83.553 21917 15228 21645 23202 21649 19269 20559 24867 27058 25889 30642 30444 28445 22979 36739 29538 26371 27807 20245 14014 22010 22723 22433 19916 21016 25039 27333 26237 31189 30453 29472 24294 36602 29507 25342 26424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80518000 16088 2005 15246 30602;30603;30604 24515 24515 1259 1 9606 Homo sapiens -0.004603038938512327 LGTAMSHEIR Unmodified 1113.5601 0.56007764 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;E7EPI4;E7EVM4 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 6.5 0.5 1 1 39.24 39.316 3 2.032E-10 9251 20230619_1886_Aki_TMTPro18x_K_F6 212.63 170.3 110530 88806 92003 119150 83696 86931 121620 114110 121350 142680 158520 165370 163780 125720 162010 167370 168640 151780 102050 81555 95051 117390 88576 90987 120430 115540 125170 143250 161200 165500 166800 133210 165160 166650 161170 144390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 169590000 16089 2005 15246 30605;30606 24516;24517 24516 2 9606 Homo sapiens 0.007839999687575983 LGTDLEYLK Unmodified 1050.5597 0.55972651 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2;O15294-4 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 0 6 0 1 59.898 59.96 2 0.0003105 17974 20230619_1886_Aki_TMTPro18x_K_F6 140.35 71.009 87452 70282 77108 92377 72618 95934 86823 79531 99399 117270 105190 121750 132640 116000 102440 168510 151950 182220 80776 64528 79234 91477 76328 96324 87108 83435 100920 116630 108940 123230 133150 122640 107810 169020 145110 172820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58192000 16090 1842 15247 30607 24518 24518 1 9606 Homo sapiens 0.03646903520575506 LGTLSALDILIK Unmodified 1255.7751 0.77513901 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 3 0 1 65.383 65.417 2 1.1926E-12 20696 20230619_1882_Aki_TMTPro18x_K_F3 180.07 112.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16091 2126 15248 30608 24519 24519 1 9606 Homo sapiens 0.15748244985366 LGTLSPAFSTR Unmodified 1148.619 0.61897272 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 3.5 0.5 1 1 53.587 53.623 2 4.2046E-06 15647 20230619_1883_Aki_TMTPro18x_K_F4 160.53 128.6 473490 412810 399070 406490 422880 507960 476130 444910 570500 305690 291110 219050 257430 175970 353750 310280 304680 177650 437430 377880 412050 412620 439430 504590 479620 455180 563850 314310 310100 225340 268210 190100 355030 302400 291110 170600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 609480000 16092 1229 15249 30609;30610 24520 24520 1 9606 Homo sapiens 0.05060799534749094 LGTPELSTAER Unmodified 1172.6037 0.60371659 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8;B4DIG6;B4DWK9;B4DIW1;B4DK31;B4DIR2 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 3.5 0.5 1 1 44.917 44.976 2 0.0011803 11876 20230619_1882_Aki_TMTPro18x_K_F3 99.788 84.706 130140 98501 117250 118680 99911 115420 119940 119300 135020 153170 160790 150080 171790 129210 137260 174420 172300 170660 120180 90378 119920 118190 105770 117070 120300 122520 137800 152850 164120 151860 173240 136450 142320 174220 164510 162140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227710000 16093 3833 15250 30611;30612 24521 24521 1 9606 Homo sapiens 0.024318879468864907 LGTPQQIAIAR Unmodified 1166.6772 0.6771563 4154 Q7L576;X5D2F4;A0A087WVZ5;B3KWV6;E7EVJ5;Q96F07;Q96F07-2;H7C229;B7Z8N7;A0A8V8TNU3;B7Z3H2;B7Z4I3;B7Z217;E7EW33;Q9NSN1;Q7L576-2;B3KWT5;Q7L576-3;H0YL50 CYFIP1;CYFIP2;DKFZp761H087 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 2.5 0.5 1 1 47.992 48.071 2 4.1952E-05 13531 20230619_1881_Aki_TMTPro18x_K_F2 130.53 105.64 121090 99715 115230 120190 123620 119420 119000 116910 125060 143660 158990 144930 149380 132660 148140 162920 159670 178690 111930 91462 117670 119710 127490 120830 120510 120350 128500 143760 161030 146740 152740 138860 151390 164060 152790 169490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154380000 16094 4154 15251 30613;30614 24522;24523 24522 2 9606 Homo sapiens 0.10048481180024282 LGTSELLLAK Unmodified 1043.6227 0.62266112 935 A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBF7 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 8 0 1 59.501 59.543 3 0.0055141 17608 20230619_1888_Aki_TMTPro18x_K_F8 71.451 46.596 34036 30698 33073 35382 28697 35244 34012 32320 40268 37956 40470 38035 40832 38503 38583 41335 44531 48223 31485 28137 33628 35351 30335 35584 34187 33385 40668 38076 41513 38636 41586 39849 39618 41870 42575 45716 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10182000 16095 935 15252 30615 24524 24524 1 9606 Homo sapiens 0.10259469308630287 LGTSVSER Unmodified 847.43995 0.43994572 4395 Q96SB3 PPP1R9B Neurabin-2 yes yes 0 0 0 4 0 1 35.681 35.729 2 0.0003728 7819 20230619_1883_Aki_TMTPro18x_K_F4 129.55 98.265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16096 4395 15253 30616 24525 24525 1 9606 Homo sapiens 0.010123349666741888 LGTYMGHTGAVWCVDADWDTK Oxidation (M) 2398.0358 0.035816519 1678 Q13347;A0A7I2YQF8;Q5U0F4;Q53HU7;A0A7I2V613;A0A7I2V607;A0A7I2V3N2;A0A7I2V2M3;A0A7I2V640;A0A7I2YQI2;A0A7I2V3U3;A0A7I2V5V8;A0A7I2YQU2;A0A7P0MRT9;A0A7I2V685;A0A7I2YQI6;Q5TFK1;A0A7I2YQC8;A0A7I2V4S8;A0A7I2V3K6;A0A7I2YQP9;A0A7I2V391;A0A7I2YQN1;A0A7I2V5E4;A0A7I2V3T4;A0A7I2YQX4 EIF3I Eukaryotic translation initiation factor 3 subunit I yes no 0 1 0 7 0 1 59.148 59.197 3 0.035996 17470 20230619_1887_Aki_TMTPro18x_K_F7 48.567 40.575 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16097 1678 15254 30617 24526 24526 1093 1 9606 Homo sapiens -0.10727995669822121 LGVAGQWR Unmodified 885.48209 0.48208531 3423 V9HW74;P09936;D6RE83;B2RD14;D6R956;D6R974;D6RF53 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 0 0 2.5 1.12 1 1 1 1 47.24 47.289 2 0.0022823 12881 20230619_1882_Aki_TMTPro18x_K_F3 129.2 94.095 2940800 2912900 2799700 2569300 3322800 4494500 2673000 3186000 4075400 549490 456140 391220 403760 340060 1520500 505790 543490 320970 2721800 2663100 2862600 2650100 3402700 4367800 2775500 3272300 3917500 699590 637690 405260 467900 361090 1466900 498590 527910 307630 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3419299999.9999995 16098 3423 15255 30618;30619;30620;30621 24527;24528;24529;24530 24528 4 9606 Homo sapiens 0.03476355165696532 LGVDISATK Unmodified 902.5073 0.50729701 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 7.5 0.5 2 2 51.392 51.469 2;3 7.0881E-05 14249 20230619_1887_Aki_TMTPro18x_K_F7 164.96 57.948 275730 209310 229310 264570 266870 281010 258190 278780 328180 324670 341870 355960 385060 295220 289500 399270 402250 401460 254490 192140 237540 262830 274130 282900 263080 286140 331030 326600 351960 357970 386970 312180 302880 399320 383770 381290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1283400000 16099 4414 15256 30622;30623;30624;30625 24531;24532 24531 2 9606 Homo sapiens 0.05214365177619129 LGVIEDHSNR Unmodified 1138.5731 0.57308516 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;Q58FF3 HSP90B1;HEL-S-125m;TRA1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 0 0 0 3.5 0.5 1 1 38.776 38.824 3 1.3987999999999999E-19 9078 20230619_1882_Aki_TMTPro18x_K_F3 204.52 169.01 1035000 776990 973100 1004300 1220500 1238100 1197400 1138400 1541100 1235300 1487100 1427700 1539000 1353600 1300500 1531800 1803400 1672200 956110 713450 997490 998540 1247400 1232200 1219000 1172500 1547300 1250100 1529800 1439000 1558700 1408100 1355600 1543700 1719700 1587200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3242799999.9999995 16100 3452 15257 30626;30627 24533;24534 24533 2 9606 Homo sapiens 0.009341543525124507 LGVLHPDVITK Unmodified 1190.7023 0.70230842 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 3.67 3.09 1 1 1 51.239 51.28 3 9.7179E-07 14854 20230619_1880_Aki_TMTPro18x_K_F1 162.26 87.419 353650 288970 314100 353330 298860 344220 341560 349090 372950 413070 387570 401200 469390 364720 392330 496920 422460 467130 326710 265100 322370 351440 312990 348880 343000 358020 379110 413580 400610 406700 472570 384560 402560 495230 404230 443840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1429900000 16101 4414 15258 30628;30629;30630 24535;24536 24535 2 9606 Homo sapiens 0.11458535982592366 LGVRPSQGGEAPR Unmodified 1322.7055 0.70549632 281 A0A384MR03;Q6MZM7;A0A024R462;B7ZLE5;P02751-12;P02751-8;P02751-7;P02751-1;P02751-11;P02751-3;P02751-17;P02751-14;P02751-13;P02751-4;P02751-9;P02751-5;P02751-6;P02751-10;P02751 DKFZp686O12165;FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 yes no 0 0 1 8 0 1 32.874 32.874 3 0.0031245 6646 20230619_1888_Aki_TMTPro18x_K_F8 78.964 59.178 8742.7 5643.3 9224.2 9743.7 17628 22755 14169 11911 24099 9753.5 14314 18891 10396 10562 19460 10465 15701 17394 8077.2 5203.6 9466.2 9653.9 17597 21755 14770 12863 23543 10288 15019 18460 11180 11159 19372 10934 15071 16441 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6633200 16102 281 15259 30631 24537 24537 1 9606 Homo sapiens 0.057051790893410725 LGVTANDVK Unmodified 915.50255 0.50254598 3570 V9HWF2;P40925;P40925-3;A0A5K1VW95;P40925-2;B9A041;B8ZZ51;C9JF79 HEL-S-32;MDH1 Malate dehydrogenase;Malate dehydrogenase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 46.162 46.248 2 0.00014837 11830 20230619_1887_Aki_TMTPro18x_K_F7 164.96 123.3 665740 546410 649950 700250 736120 717190 755580 759910 861480 768730 886820 926350 944990 745430 817870 910920 1032700 888760 615480 501510 663050 694800 757650 725140 764070 773720 872390 781230 911420 927230 956380 783730 846190 911290 985050 844910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1209800000 16103 3570 15260 30632;30633 24538;24539 24539 2 9606 Homo sapiens 0.041414810348555875 LGVTNTIISHYDGR Unmodified 1544.7947 0.79470526 3589 P46087;P46087-4;P46087-2;P46087-3 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 1 0 1 51.052 51.052 3 8.4501E-47 14744 20230619_1880_Aki_TMTPro18x_K_F1 241.15 218.83 40548 36994 44012 42568 45342 49043 45107 43586 47499 49709 45259 47817 60024 38685 51427 58315 49901 49874 37547 33905 44429 42629 46964 48990 45581 45071 48217 49846 47210 48326 60295 41291 52399 57792 47760 47460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185530000 16104 3589 15261 30634 24540 24540 1 9606 Homo sapiens 0.04409969258176716 LGVTVLSR Unmodified 843.5178 0.51780212 3317 V9HW40;Q53F60;O75828 HEL-S-25;CBR3 Carbonyl reductase [NADPH] 3 yes no 0 0 0 3 0 1 48.346 48.425 2 0.002751 13414 20230619_1882_Aki_TMTPro18x_K_F3 121.74 0 925770 678300 728670 933090 867400 1048400 843020 867330 1090200 1040400 1083400 1033100 1063200 811600 948120 1064700 1141500 1094500 853970 623320 759960 922230 891040 1046900 859110 903250 1096500 1042100 1110500 1041700 1079800 858410 977430 1067100 1090000 1039400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1425700000 16105 3317 15262 30635 24541 24541 1 9606 Homo sapiens 0.08978392622702813 LGWFDCQK Unmodified 1052.475 0.47495102 2083 A8K607;Q9UIA9;E7ESC6;H0YBE1 XPO7 Exportin-7 yes no 0 0 0 1 0 1 58.936 58.936 2 0.0067255 18070 20230619_1880_Aki_TMTPro18x_K_F1 119.29 68.325 66093 44884 57991 53280 41201 49744 57908 62366 62900 65840 55991 51825 64961 56453 45272 77525 72006 65285 60987 41196 59304 53115 44626 50854 57607 62909 63560 65914 58116 53455 65123 59187 48034 76781 68590 62163 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26709000 16106 2083 15263 30636 24542 24542 1 9606 Homo sapiens -0.04918745497047894 LGWGSGWDVLLPK Unmodified 1426.7609 0.76088593 4347 Q99575;Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 0 3 0 1 64.691 64.723 3 0.00029097 20520 20230619_1882_Aki_TMTPro18x_K_F3 94.767 78.877 20162 17384 17451 21600 17094 23084 22053 21549 20816 23977 23007 20984 23957 21205 24224 22261 23795 26752 18629 15948 17981 21481 17949 23184 21911 22187 21380 24007 23538 21448 24435 21932 24594 22611 22791 25350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23788000 16107 4347 15264 30637 24543 24543 1 9606 Homo sapiens 0.06457592557057978 LGYAGNTEPQFIIPSCIAIK Unmodified 2191.1347 0.13472593 622 P61158;A0A024RAI1 ACTR3 Actin-related protein 3 yes no 0 0 0 3 0 1 63.615 63.646 3 5.9414E-16 19939 20230619_1882_Aki_TMTPro18x_K_F3 147.17 130.23 176690 160140 176150 192600 184460 219320 175070 179380 167800 225960 204150 210290 270840 217470 182000 261430 264470 247900 163480 146830 179210 192160 190780 218830 176970 187260 173220 225340 210640 214460 270050 226490 191610 261020 252130 235660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 203430000 16108 622 15265 30638 24544;24545 24544 2 9606 Homo sapiens 0.0868039535735079 LGYANAK Unmodified 735.39154 0.39153897 3571 P41091;Q2VIR3;Q2VIR3-2;H7BZU1 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 8 0 1 42.462 42.465 2 0.025654 10499 20230619_1888_Aki_TMTPro18x_K_F8 97.596 50.529 29572 20136 38268 38181 41521 41115 38903 39756 37347 34884 46300 42759 38494 36598 51451 23352 44800 39337 27383 18588 38192 37088 42727 41303 39356 40586 38471 35753 46748 42823 40160 37259 51563 24674 42891 37213 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16502000 16109 3571 15266 30639 24546 24546 1 9606 Homo sapiens 0.013258861174222147 LGYILTCPSNLGTGLR Unmodified 1733.9134 0.91344018 3442 P12532;P12532-2;P17540;B3KVA7;A0A024RAK5;B2R8A3 CKMT1A;CKMT2 Creatine kinase U-type, mitochondrial;Creatine kinase S-type, mitochondrial yes no 0 0 0 6 0 1 62.455 62.507 3 2.1748999999999997E-19 19225 20230619_1886_Aki_TMTPro18x_K_F6 205.27 180.98 444870 417750 519000 473700 354850 482000 460960 468080 533020 639990 588480 613160 656180 587970 510530 709280 756640 780800 412310 382780 518380 474180 385000 486390 461260 483740 541730 636640 604140 622740 661090 613820 536380 714160 721740 740760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1958499999.9999998 16110 3442 15267 30640 24547;24548 24547 2 9606 Homo sapiens 0.07584000171505068 LGYPVLVR Unmodified 915.55419 0.55418762 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 4 0 1 53.623 53.642 2 0.0024812 15625 20230619_1883_Aki_TMTPro18x_K_F4 126.04 100.86 172150 143630 148240 149950 164290 201380 170470 169420 190600 153440 130580 120140 140870 114140 173090 169900 158020 132690 159020 131560 152850 151650 169780 199000 172120 174810 190630 155010 137280 123390 144970 120890 174590 167770 151170 126520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142510000 16111 2980 15268 30641 24549 24549 1 9606 Homo sapiens 0.09303269519409696 LGYTPVCR Unmodified 964.48004 0.4800364 99 A0A024R0L6;Q15102;M0R1K3 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma yes no 0 0 0 1.5 0.5 1 1 42.862 42.902 2 0.002232 11158 20230619_1881_Aki_TMTPro18x_K_F2 130 82.258 531240 432690 475100 487530 516180 521130 505770 498970 593540 551140 579560 583970 618030 534590 534220 632900 717390 699670 490780 396640 487870 488470 532500 524200 513370 512740 599180 555330 596940 589790 625840 558350 555330 637850 684500 663910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 558510000 16112 99 15269 30642;30643 24550;24551 24551 2 9606 Homo sapiens -0.0036244163441097044 LHAAEGVEPGSQR Unmodified 1349.6688 0.66877646 2258 B3KMW8;B2R886;Q8WUN7 DC-UbP;UBTD2 Ubiquitin domain-containing protein 2 yes no 0 0 0 3 0 1 33.616 33.681 3 2.8354999999999997E-21 7045 20230619_1882_Aki_TMTPro18x_K_F3 181.98 139.42 20823 14510 20329 23982 26602 26633 24406 23633 30195 25161 29974 29107 29375 21067 25606 27561 37439 30097 19233 13367 20805 23454 27064 26656 24911 24398 30408 25475 30726 29103 29808 22360 26763 27727 35656 28586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35412000 16113 2258 15270 30644 24552 24552 1 9606 Homo sapiens 0.007928824727514439 LHAEAIK Unmodified 780.44939 0.4493882 4569 Q9NQ50 MRPL40 39S ribosomal protein L40, mitochondrial yes yes 0 0 0 6 0 1 38.209 38.284 3 0.0020058 8821 20230619_1886_Aki_TMTPro18x_K_F6 127.84 81.278 107110 39177 89297 110670 142110 128000 129870 137880 178490 79891 94516 70817 78653 68841 86338 69046 100050 62259 98561 36577 93092 105960 143000 128250 133050 138590 175390 83755 100080 72360 81214 71079 88302 69079 95334 59344 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139950000 16114 4569 15271 30645 24553 24553 1 9606 Homo sapiens 0.05038148042854118 LHAEAISLLK Unmodified 1093.6495 0.64954457 848 B7Z879;Q658K0;Q53FX3;A0A087WXL6;Q9H270;A0A0G2JS92 VPS11;DKFZp564P2364 Vacuolar protein sorting-associated protein 11 homolog yes no 0 0 0 1.5 0.5 1 1 52.243 52.262 3 0.00011211 15539 20230619_1881_Aki_TMTPro18x_K_F2 127.76 65.302 26174 16507 29732 28428 29782 32297 35631 29674 31043 34196 36930 38724 37778 28311 31757 35297 38558 40353 24195 15222 29904 27767 31052 32290 35442 30636 32132 34442 37662 38742 38218 29940 32793 35629 36839 38267 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176140000 16115 848 15272 30646;30647 24554 24554 1 9606 Homo sapiens 0.10646577919806077 LHAEFAAER Unmodified 1042.5196 0.51959303 4523 Q9H773 DCTPP1 dCTP pyrophosphatase 1 yes yes 0 0 0 3.5 0.5 1 1 37.142 37.191 3 1.2367E-08 8462 20230619_1882_Aki_TMTPro18x_K_F3 179.51 136.39 87312 48273 73446 80083 83788 94202 86873 84259 117910 87855 106690 121360 110310 88503 101390 107890 116060 110880 80465 44522 75960 78390 86400 93905 88350 86889 117800 89671 110240 120540 112020 93396 104090 108270 110870 105310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155170000 16116 4523 15273 30648;30649 24555;24556 24555 2 9606 Homo sapiens 3.401640651645721E-05 LHAEFAAERDWEQFHQPR Unmodified 2266.0668 0.066797792 4523 Q9H773 DCTPP1 dCTP pyrophosphatase 1 yes yes 0 0 1 5.5 0.5 1 1 46.844 46.924 5 2.745E-60 12435 20230619_1885_Aki_TMTPro18x_K_F5 260.65 244.34 73775 38059 49391 52837 50415 45690 62461 68193 81124 84552 80182 61075 86946 73034 76570 87198 73886 73949 67873 35039 52226 52074 52622 47277 62860 68503 81583 83855 82468 63552 88012 75704 77956 86634 70720 70377 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 352770000 16117 4523 15274 30650;30651 24557 24557 1 9606 Homo sapiens -0.015592934584674367 LHAELSEQIK Unmodified 1166.6295 0.62953741 4038 Q5JRA6-2;Q5JRA6;A0A0A0MRH6;Q5JRA6-4 MIA3 Melanoma inhibitory activity protein 3 yes no 0 0 0 5.5 0.5 1 1 44.386 44.471 3 4.5522E-05 11383 20230619_1885_Aki_TMTPro18x_K_F5 118.71 68.996 58493 38619 51031 57848 67754 75336 66330 74491 95693 59598 68572 68315 66425 56961 61062 72996 74079 70074 53964 35540 52757 57041 69092 74795 67848 75722 94618 61361 71523 68616 67639 59964 62970 72899 70725 66602 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82564000 16118 4038 15275 30652;30653 24558 24558 1 9606 Homo sapiens 0.052887821891772546 LHAVNAEECNVLQGR Unmodified 1708.8315 0.83150147 65 Q6IBN4;Q53HG3;Q53GC8;A0A0C4DGA2;A0A024QZU5;O75521-2;O75521 PECI;ECI2 Enoyl-CoA delta isomerase 2, mitochondrial yes no 0 0 0 4.5 0.5 1 1 43.43 43.492 3 7.471E-19 10982 20230619_1885_Aki_TMTPro18x_K_F5 203.85 195.03 47821 31950 54283 56521 60902 67722 69472 72740 74407 55093 66926 68312 69021 59087 62920 66116 80364 74790 44218 29465 54731 55179 62942 67693 69701 73477 75146 57045 69123 68467 70112 61628 65064 66806 76684 70964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 240650000 16119 65 15276 30654;30655 24559 24559 1 9606 Homo sapiens 0.005438978124175264 LHCESESFK Unmodified 1135.4968 0.49680868 2758 C9JLU1;P52434;P52434-4;P52434-2 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes no 0 0 0 4 0 1 39.353 39.395 3 0.00078894 9287 20230619_1883_Aki_TMTPro18x_K_F4 103.55 92.717 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16120 2758 15277 30656 24560 24560 1 9606 Homo sapiens -0.06551985539113048 LHDAFFK Unmodified 876.44939 0.4493882 3850 Q13435;E9PPJ0;Q7Z3K9 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 0 4.5 3.5 1 1 48.303 48.336 3 0.0036619 13663 20230619_1880_Aki_TMTPro18x_K_F1 114.6 67.535 418000 147730 333670 411350 374930 363620 429260 428750 490920 469470 458370 423960 542610 427170 378720 521650 423160 467650 384490 137920 347020 392590 387490 372430 431500 434640 495460 470920 475080 432820 543090 445670 391260 519270 404750 444590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 611850000 16121 3850 15278 30657;30658 24561;24562 24561 2 9606 Homo sapiens 0.006221480428507675 LHDALDAK Unmodified 881.46068 0.46068117 3406 P07954-2;A0A804HI24;A0A0S2Z4C3;P07954 FH Fumarate hydratase, mitochondrial yes no 0 0 0 4 0.816 1 1 1 41.223 41.286 3 0.00022667 10113 20230619_1883_Aki_TMTPro18x_K_F4 144.09 77.057 587710 211370 435280 588520 695990 557300 630750 705740 973430 651790 804580 791060 790610 626660 606080 735840 728410 805630 540370 197300 459460 562150 699910 569090 650030 709140 964360 666270 832310 791410 798380 657820 627050 741230 696290 764170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1115900000 16122 3406 15279 30659;30660;30661 24563;24564 24563 2 9606 Homo sapiens 0.015209253463240202 LHDFGYR Unmodified 906.4348 0.43480077 426 P43490;A0A024R718;A0A7P0T9I9;A0A7P0T895;A0A7P0T8L3;A0A7P0T973;A0A7P0TAS5;A0A7P0T931;A0A7P0T862;A0A7P0T8D2;A0A0C4DFS8;A0A7P0TA73;A0A7P0TBB7;A0A7P0T941;A0A7P0Z466;B7Z8W6 NAMPT;PBEF1 Nicotinamide phosphoribosyltransferase yes no 0 0 0 7 0.816 1 1 1 39.646 39.673 3 0.00022073 9083 20230619_1887_Aki_TMTPro18x_K_F7 178.84 122.33 169780 47559 128140 169310 169320 129190 169510 161650 195530 201000 222930 213530 237340 187970 164310 264630 192310 231940 156030 44776 134430 160180 172290 134350 171670 164040 198870 201370 227900 215500 238190 198800 170490 262550 184010 220500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 156480000 16123 426 15280 30662;30663;30664 24565;24566;24567 24566 3 9606 Homo sapiens -0.022159241052804646 LHDFVSK Unmodified 844.4443 0.44430282 126 Q9H0H5;A0A2X0U4T9;A0A024R136;B2RE34;F8VRD2;H0YIK5;F8VRL2 RACGAP1 Rac GTPase-activating protein 1 yes no 0 0 0 8 0 1 44.128 44.147 3 0.0071612 11153 20230619_1888_Aki_TMTPro18x_K_F8 98.009 56.357 60573 31432 57628 60676 66735 77737 66417 60131 94533 79441 80592 68785 104740 71761 55805 74766 73718 66951 55860 29064 58946 59029 68680 76851 67823 63166 94149 79008 84241 70433 103690 74167 58694 74606 70313 63698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59910000 16124 126 15281 30665 24568 24568 1 9606 Homo sapiens 0.015858441802379275 LHDPEGMGIIPR Unmodified 1333.6813 0.6812554 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;Q6P164;Q66K46;Q2TA90 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 5.5 0.5 1 1 47.345 47.423 3 5.9911E-07 12646 20230619_1885_Aki_TMTPro18x_K_F5 132.03 105.14 89112 61678 91366 93063 82891 93925 100450 97220 120450 97688 102720 96022 108360 87312 96537 106040 104010 111010 82338 56753 92516 91396 87273 94944 100880 99123 120800 98696 106420 97307 109820 91382 98840 106510 99493 105360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129000000 16125 2727 15282 30666;30667 24569;24570 24569 2 9606 Homo sapiens 0.027762026114487526 LHDPQLMGIIPR Unmodified 1388.7598 0.75984008 1036 O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;A0A7I2V581;A0A7I2V3V4;Q6PKD1;Q6PJC4;Q57YV5;A5D6Y6;A0A6Q8PH72 KIF5C;KIF5A Kinesin heavy chain isoform 5C;Kinesin-like protein no no 0 0 0 1 0 1 53.22 53.22 3 0.00018144 15622 20230619_1880_Aki_TMTPro18x_K_F1 100.38 68.155 36543 28501 35952 39697 34190 36956 41135 41204 45993 46119 44972 45364 46581 43117 39851 54877 45345 44763 33776 26188 36568 39129 35834 37670 41229 41936 46550 46320 46258 46027 47199 45140 41030 54351 43328 42625 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53486000 16126 1036 15283 30668 24571 24571 1 9606 Homo sapiens 0.08101054916528483 LHDVLHSDK Unmodified 1062.5458 0.54580778 901 Q6IAW3;A0A090N7W4;Q00535;Q00535-2;A0A0S2Z355 CDK5 Cyclin-dependent-like kinase 5 yes no 0 0 0 5 0.816 1 1 1 38.495 38.567 4 2.2609E-05 8967 20230619_1886_Aki_TMTPro18x_K_F6 163.16 117.16 36990 7088.7 17032 28316 41245 17610 29163 39101 55095 37772 50271 55375 58107 52348 18757 68858 32128 65210 33887 6729.8 19355 26675 40488 19142 30896 38405 54414 38800 52102 55367 57209 54935 20800 68568 30840 61854 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61289000 16127 901 15284 30669;30670;30671 24572 24572 1 9606 Homo sapiens 0.01703670812139535 LHEAPDNSEGPR Unmodified 1320.6058 0.60584185 2448 X6R3R3;B3KYA9;H0YDM2;F2FB34;O94964-4;O94964;O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form yes no 0 0 0 1 0 1 30.389 30.389 3 0.00011491 6154 20230619_1880_Aki_TMTPro18x_K_F1 109.16 105.12 17329 11920 15316 15740 21412 18130 17027 17551 25091 19903 20989 18857 21933 22418 18605 17740 33635 21339 15992 10952 15811 15613 21618 18152 17669 18028 24934 19978 21749 19310 22244 22752 19794 18112 31951 20275 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16489000 16128 2448 15285 30672 24573 24573 1 9606 Homo sapiens -0.04163683315300659 LHEAVFLR Unmodified 983.55525 0.55525025 1264 A0A1B0GU86;V9HWA0;B4DNW0;C9JMV9;Q03154-2;Q03154-4;Q03154;A0A1B0GW23;Q03154-3 HEL-S-5;ABHD14A-ACY1;ACY1 Aminoacylase-1 yes no 0 0 0 8 0 1 43.828 43.842 3 1.6195E-05 11029 20230619_1888_Aki_TMTPro18x_K_F8 170.66 113.38 36004 14741 26611 31354 31722 32381 35385 37058 51326 36989 38824 34150 43898 34681 30709 52677 36077 38210 33117 13674 27918 30285 32676 32748 35941 37524 50844 37332 40590 34877 44006 36700 31881 51769 34481 36437 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27474000 16129 1264 15286 30673 24574 24574 1 9606 Homo sapiens 0.06281483888324146 LHEDHLER Unmodified 1047.5098 0.50975662 4560 Q9NPD3;A0A994J4D9;E9PI41 EXOSC4 Exosome complex component RRP41 yes no 0 0 0 1.5 0.5 1 1 28.224 28.261 3 0.00037536 5033 20230619_1881_Aki_TMTPro18x_K_F2 133.23 111.15 22143 12767 18071 20822 26134 26245 23367 23972 32456 23288 30031 28761 27467 27571 21780 27345 31850 27188 20406 11770 18830 20421 26440 26069 23994 24626 32416 23764 30793 28921 27884 28442 22832 27463 30344 25842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27985000 16130 4560 15287 30674;30675 24575 24575 1 9606 Homo sapiens -0.012097863647113627 LHEDLCEK Unmodified 1042.4753 0.47534495 4224 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 3 0.816 1 1 1 39.657 39.713 3 0.00026562 9616 20230619_1881_Aki_TMTPro18x_K_F2 141.48 110.92 287660 143630 250710 280920 338100 284960 345000 313840 382770 331180 388700 356610 369610 311590 305080 350640 342980 318180 265060 132870 259180 272260 343840 288520 348470 319190 387830 334620 397390 359490 374730 324900 313700 349850 327620 302640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 787130000 16131 4224 15288 30676;30677;30678 24576;24577 24576 2 9606 Homo sapiens -0.044193705678253536 LHEEELR Unmodified 924.46649 0.46649483 2433 B3KWQ6;P41219;P41219-2;F8W835 PRPH Peripherin yes no 0 0 0 1.5 0.5 1 1 33.024 33.053 3 2.8631E-06 7180 20230619_1880_Aki_TMTPro18x_K_F1 189.62 102.04 242220 43618 188240 226360 237080 161360 231990 231260 342200 315430 401180 457030 407920 399650 305570 403700 361770 485140 222470 41840 196540 212380 241800 169620 237600 233820 344550 318610 409310 455430 411580 414120 316220 409910 346450 459470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 513110000 16132 2433 15289 30679;30680 24578;24579 24578 2 9606 Homo sapiens 0.0012402385800669435 LHEEGIIYR Unmodified 1128.5928 0.59275797 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;P26640-2 VARS Valine--tRNA ligase yes no 0 0 0 3.5 0.5 1 1 40.53 40.579 3 1.0407E-06 9851 20230619_1882_Aki_TMTPro18x_K_F3 186.76 161.99 281780 143660 285640 276260 338180 350760 311390 353330 396560 352040 432260 455470 428920 357440 383130 355620 403450 475900 259970 132840 290530 268910 346340 348890 318320 360580 400420 358990 441770 454210 435580 372000 391390 364240 386320 450470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 850090000 16133 725 15290 30681;30682 24580;24581 24580 2 9606 Homo sapiens 0.033605303633066796 LHEILQK Unmodified 879.5178 0.51780212 872 A0A8V8TMN4;B4DGV1;A0A087WZV0;O43314-2;O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes no 0 0 0 1 0 1 45.306 45.306 3 0.0069529 12422 20230619_1880_Aki_TMTPro18x_K_F1 98.997 40.079 50193 47437 58930 53516 72749 53635 68795 69596 87810 52241 57659 53736 49770 49164 68352 59940 66744 56906 46523 43462 59282 53602 74153 54674 70160 69524 87061 53824 60243 54379 51997 51398 69039 59924 63808 54118 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54299000 16134 872 15291 30683 24582 24582 1 9606 Homo sapiens 0.07322392622711504 LHELNQK Unmodified 880.47667 0.47666558 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 6.5 0.5 1 1 36.886 36.953 3 0.00031603 8044 20230619_1887_Aki_TMTPro18x_K_F7 172.03 103.55 217860 54422 235630 258050 351110 258270 290960 358220 321520 238060 360600 390520 328140 302400 297660 144870 349400 361390 200710 51783 239600 243540 352870 263280 297980 355680 326990 251570 366890 386170 334600 306640 305190 160790 333890 340910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 297030000 16135 1022;3868 15292 30684;30685 24583;24584 24584 2 9606 Homo sapiens 0.03164631583240407 LHELTVMQDR Unmodified 1240.6234 0.62340617 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;B4DS27 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 4.5 0.5 1 1 43.525 43.587 3 7.8938E-10 11031 20230619_1885_Aki_TMTPro18x_K_F5 195.36 118.51 123200 83329 114000 125220 134270 140390 157950 139090 179990 128390 143330 131780 151130 106500 129680 126880 138870 135830 113730 76680 116960 123160 138460 140750 158450 141950 180470 130530 149030 132820 152840 111890 132730 127690 132760 128930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 163470000 16136 2727 15293 30686;30687 24585;24586 24586 2 9606 Homo sapiens 0.012719406860014715 LHEQLTESEQAAQCYIK Unmodified 2046.9681 0.96805453 4671 Q9UJX2-3;Q9UJX2 CDC23 Cell division cycle protein 23 homolog yes no 0 0 0 4.5 0.5 1 1 51.841 51.915 3 9.1429E-10 14623 20230619_1885_Aki_TMTPro18x_K_F5 140.84 123.96 25774 14830 24550 25342 21352 24182 27095 27226 29252 42556 42210 46187 50634 43914 34344 48393 45980 51517 23779 13680 24999 24704 22591 24597 27070 28012 30255 42274 43074 46627 50642 45611 35931 48693 43919 48878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91949000 16137 4671 15294 30688;30689 24587;24588 24588 2 9606 Homo sapiens -0.013550775383237124 LHFFMPGFAPLTAR Unmodified 1603.8333 0.83333937 983 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3 TUBB3 Tubulin beta-3 chain no no 0 0 0 8 0 1 62.389 62.414 3 4.1006E-05 18829 20230619_1888_Aki_TMTPro18x_K_F8 103.76 84.929 155250 72975 124180 135240 84130 117900 102100 116140 150950 65995 40768 52497 53376 53462 81474 73145 73264 60456 142930 67477 128190 131140 91426 120330 103450 117460 146390 69143 47712 53961 55535 56114 81848 72508 70089 57603 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 834810000 16138 983 15295 30690 24589 24589 1 9606 Homo sapiens 0.05557603359034147 LHFFMPGFAPLTSR Oxidation (M) 1635.8232 0.82316861 3748;1486;3381;1424;3870;2562;3176;3970 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;I0CMK4;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DJ43;B4DE77;B4DFH6;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB2B;DKFZp566F223;TUBB4Q;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB8;TUBB4A;TUBB6 Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 1 0 7.25 0.829 1 1 2 59.77 59.816 3 7.8717E-09 17501 20230619_1887_Aki_TMTPro18x_K_F7 154.1 145.5 602610 366040 532370 607250 605730 591700 601360 621620 736910 370850 415910 341040 350170 309290 422280 406490 390660 355970 555780 337440 548070 592880 623020 600000 610640 626390 728990 387940 438600 347130 363120 325130 426310 404180 373850 338770 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 7355699999.999999 16139 1424;1486;3748;3870;3970;3381;2562;3176 15296 30691;30692;30693;30694 24590;24591;24592;24593;24594 24591 895 5 9606 Homo sapiens 0.0306899563377101 LHFFMPGFAPLTSR Unmodified 1619.8283 0.82825399 3748;1486;3381;1424;3870;2562;3176;3970 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;I0CMK4;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;Q1KSF8;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DJ43;B4DE77;B4DFH6;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB2B;DKFZp566F223;TUBB4Q;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB8;TUBB4A;TUBB6 Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 0 0 8 0 7 70.112 70.134 3 1.4344E-08 18770 20230619_1888_Aki_TMTPro18x_K_F8 147.73 91.61 975280 485460 969520 899720 772890 941730 887720 1031200 1354700 406090 337890 298340 310390 253100 543270 370250 364980 167190 899560 448670 981960 874880 823080 950010 902830 1030100 1309800 442130 393450 306770 329010 268450 537460 359490 349540 161670 9 6 9 9 9 9 9 8 8 8 8 7 8 7 9 8 8 8 22897000000 16140 1424;1486;3748;3870;3970;3381;2562;3176 15296 30695;30696;30697;30698;30699;30700;30701 24595;24596;24597;24598;24599;24600;24601;24602;24603 24595 9 9606 Homo sapiens 0.043132994964025784 LHFGIDPDDTTITDLP Unmodified 1768.8519 0.85194536 323 A0A024R573;Q7L266;Q9BRH2;Q7L266-2 ASRGL1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes no 0 0 0 3 0 1 63.455 63.486 2 0.0063731 19873 20230619_1882_Aki_TMTPro18x_K_F3 53.327 44.373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16141 323 15297 30702 24604 24604 1 9606 Homo sapiens -0.0017265304677493987 LHFHNLVK Unmodified 1006.5712 0.57123467 2138 A8K9K6;O00567;A0PJ92;A0A494C128;Q5JXT2 NOP56 Nucleolar protein 56 yes no 0 0 0 3.5 0.5 1 1 42.167 42.22 4 0.032955 10474 20230619_1883_Aki_TMTPro18x_K_F4 67.032 43.002 205240 99389 180470 215200 225210 215430 232940 223100 280230 143310 125840 102770 127980 104200 154580 138380 122470 92655 189110 92115 186250 207580 230450 217860 235700 225320 276280 148140 136400 106390 131830 109230 154850 136030 117280 88598 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162610000 16142 2138 15298 30703;30704 24605;24606 24605 2 9606 Homo sapiens 0.068211901252198 LHFLMTGYTPLTTDQSVASVR Oxidation (M) 2352.1784 0.17838166 3493 P23258;A0A1B4Z394;Q9NRH3 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 0 1 0 3 0 1 57.705 57.738 3 1.2211999999999998E-22 17518 20230619_1882_Aki_TMTPro18x_K_F3 171.35 154.87 109020 63349 85630 108290 76608 87923 89413 101160 113810 118310 130930 122810 134680 121930 103010 161800 131870 163620 100450 58435 88925 105330 80760 90692 90230 102900 115250 118780 133580 124570 135900 127890 107240 161860 126120 155270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31158000 16143 3493 15299 30705 24607;24608 24608 2160 2 9606 Homo sapiens 0.05637960063813807 LHFPLLR Unmodified 894.54396 0.54395729 2143 B4DRC4;Q6AW82;F6TX30;A8K9U2;Q9NWX5 DKFZp686H0429;ASB6 Ankyrin repeat and SOCS box protein 6 yes no 0 0 0 6 0 1 52.393 52.47 3 0.014808 14967 20230619_1886_Aki_TMTPro18x_K_F6 84.359 57.229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16144 2143 15300 30706 24609 24609 1 9606 Homo sapiens 0.09246706584860931 LHGADLK Unmodified 752.41809 0.41808807 4790 yes no 0 0 0 6.17 0.687 1 3 2 37.468 37.543 3 0.012613 8526 20230619_1886_Aki_TMTPro18x_K_F6 88.643 33.202 + 536620 260900 582940 611390 759190 725230 647510 693130 707670 530400 851140 839960 724200 655690 731750 332860 887640 731340 495290 242150 590960 589450 770620 723540 661550 706010 722210 554330 860930 831860 743750 665580 750200 363450 846700 690980 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1443500000 16145 4790 15301 30707;30708;30709;30710;30711;30712 24610;24611;24612 24610 3 9606 Homo sapiens 0.031975750087553934 LHGELQDR Unmodified 966.48829 0.4882929 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 2.5 0.5 1 1 31.476 31.549 3 0.00012797 6306 20230619_1881_Aki_TMTPro18x_K_F2 161.02 136.87 350010 128350 291470 333000 389350 317200 370990 393840 475500 433060 440340 395420 508340 389640 355480 431030 438480 407310 322080 119610 302540 318940 395600 323620 378310 397980 477160 434480 455900 403080 509140 404530 369140 430990 418510 387230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 728010000 16146 1748 15302 30713;30714 24613;24614 24613 2 9606 Homo sapiens 0.003708286065716493 LHGELQDRK Unmodified 1094.5833 0.58325592 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 1 6 0 1 33.334 33.375 3 0.043159 7048 20230619_1886_Aki_TMTPro18x_K_F6 47.706 21.587 30573 13062 20454 24371 28436 26307 25531 27764 39180 28548 31056 31600 41099 33075 20399 40143 43299 33431 28108 12087 21754 23688 28842 26483 26324 28277 38798 28932 32654 32016 40659 34438 22475 39794 41139 31861 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19025000 16147 1748 15303 30715 24615 24615 1 9606 Homo sapiens 0.03974762077768901 LHGGMEQEER Unmodified 1184.5244 0.52442041 2626 B4DYZ1;Q9H8H2;Q9H8H2-2;Q9H8H2-4 DDX31 Probable ATP-dependent RNA helicase DDX31 yes no 0 0 0 1 0 1 30.178 30.178 3 0.013346 6103 20230619_1880_Aki_TMTPro18x_K_F1 58.676 42.786 6968.2 3461.8 8017.3 6308.1 7163.5 6985.3 8051.5 6653 8010.8 7336.7 8677 9405.2 9669.9 5929.8 9251.1 7347.6 8563.8 8739.8 6435.6 3199.1 8032.7 6145.4 7519.8 7003 8066.6 6843.3 8187.6 7439.6 8921.7 9331.5 9799.7 6317.4 9365.7 7444.9 8201.7 8285.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8567900 16148 2626 15304 30716 24616 24616 1 9606 Homo sapiens -0.060460822788854784 LHGKPIR Unmodified 819.50791 0.50790613 1159;1980 P26599;P26599-2;A0A0U1RRM4;P26599-1;A0A7I2V621;A0A0D9SF20;K7EK45;A0A087WUW5;A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 no no 0 0 1 4.5 0.5 1 1 31.356 31.427 3 0.05492 6198 20230619_1885_Aki_TMTPro18x_K_F5 64.547 33.489 273710 125250 265470 284100 397520 347370 344890 336120 343280 321340 405610 330130 292960 244910 377010 137830 271020 175960 252330 116230 272360 274380 400250 346130 350740 343730 352140 325760 407940 331660 306300 249850 374670 143270 259680 167070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143190000 16149 1159;1980 15305 30717;30718 24617;24618 24618 2 9606 Homo sapiens 0.09093249407987969 LHGLNINYNCEICGNYTYR Unmodified 2373.063 0.063034322 2066 B3KY12;A8K7V1;A8K566;Q12874;Q53HM6;B4DW90 SF3A3 Splicing factor 3A subunit 3 yes no 0 0 0 2 0 1 53.01 53.043 3 4.3028999999999996E-40 15754 20230619_1881_Aki_TMTPro18x_K_F2 264 255.81 30662 19185 30463 35378 27524 32848 32486 31921 42372 41460 37947 42211 45162 37109 30122 47095 46753 50511 28309 17709 30950 34333 28990 33358 32774 32942 42447 41419 39464 42631 45159 38989 31907 47301 44598 47925 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12806000 16150 2066 15306 30719 24619;24620 24619 2 9606 Homo sapiens -0.06857467338750212 LHGTVVEGR Unmodified 966.52468 0.52467841 894 O43251-4;O43251-10;O43251-5;Q9NWB1-3;F8VZG9;A0A8Q3WKT3;Q9NWB1-2;F8WSN4;J3KNW3;B0QYY4;B7ZLH9;B7Z1U7;I3L1D4;A0A6Q8PH77;A0A087X2B1;A0A804HJM2;A0A994J531;A0A0G2JRA5;X5DNY3;A0A8Q3SI58;X5D7T5;X5DP44;O43251-2;A0A6Q8PFM4;O43251-7;Q8TCM0;S4R469;A0A804HKG7;A0A6Q8PHA3;A0A6Q8PGE0;B0QYV1;F8VZY7;A0A286YEU2;F8VR27;O43251-6;O43251-8;Q59HD3;O43251-9;Q9NWB1;Q9NWB1-5;Q9NWB1-4;O43251;A0A8Q3SI75;A0A8Q3SI19;S4R3K7;F8VRS4;A0A0G2JRD1;O43251-3 RBFOX2;RBFOX1;A2BP1;DKFZp547L059 RNA binding protein fox-1 homolog 2;RNA binding protein fox-1 homolog 1;RNA binding protein fox-1 homolog yes no 0 0 0 5.5 0.5 1 1 31.904 31.96 3 0.00055852 6397 20230619_1885_Aki_TMTPro18x_K_F5 110.76 69.769 20690 14093 24898 28178 34407 25534 26440 30293 27164 31743 41261 42486 35875 30906 25263 25919 46038 42838 19143 13021 25087 27243 34658 26141 27171 30656 28208 32300 41423 42221 36295 32017 27022 27074 43825 40520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21985000 16151 894 15307 30720;30721 24621 24621 1 9606 Homo sapiens 0.04007705503295256 LHGVNINVEASK Unmodified 1279.6884 0.68844927 2142;4410 A8K9U0;Q9BWF3;E9PB51;Q9BWF3-4;D6R9K7;J3QRR5;Q9BWF3-3;Q9BWF3-2;Q9BQ04;E9PLB0;E9PM61;U3KQD5 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B no no 0 0 0 7.5 0.5 1 1 45.558 45.621 3 4.3813E-07 11741 20230619_1888_Aki_TMTPro18x_K_F8 153.74 105.73 597480 369290 551530 557840 556260 654000 599280 569110 688790 688320 649660 648860 766950 580820 561120 698480 704250 642680 551280 339990 564230 548900 579100 651780 604550 590490 695460 688180 673300 658110 768860 607900 582830 696550 672010 611240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 939980000 16152 2142;4410 15308 30722;30723 24622;24623 24623 2 9606 Homo sapiens 0.059792584834895024 LHHPSDINLR Unmodified 1200.6364 0.63635412 4813 yes yes 0 0 0 5.5 0.5 2 2 27.978 28.03 3 0.010931 5097 20230619_1886_Aki_TMTPro18x_K_F6 55.064 16.707 + 23064 10026 21313 39590 21493 17388 20944 20137 25273 60745 69365 80636 79959 71958 31252 75905 40743 82178 21251 9432.4 21895 37169 22256 19306 21323 21520 27390 59759 69547 80605 78944 74696 33428 76434 39178 77835 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 53555000 16153 4813 15309 30724;30725;30726;30727 24624;24625 24625 2 9606 Homo sapiens 0.044061398604071655 LHHQNQQQIQQQQQQLQR Unmodified 2310.169 0.16897145 4393 Q96RN5;Q96RN5-2;Q96RN5-3;Q6PKB8;B7Z2H7;G3V1P5;B4DN68;H7C308;B4DM43 MED15 Mediator of RNA polymerase II transcription subunit 15 yes no 0 0 0 4.5 3.5 1 1 30.109 30.116 4 2.7372E-24 5671 20230619_1888_Aki_TMTPro18x_K_F8 214.65 193.84 6087.2 0 1606.4 5395.6 6463.7 1565.8 5901.3 7835.7 8927.8 6146 8379.8 7066.5 6845.4 6674.9 3191.1 9649.2 3843.7 8153.6 5559.3 0 1883.3 4943.7 6287.1 1769.4 6071.3 7522.3 8888.3 6328.2 8538.3 7134.5 6866.6 7048.2 3384.2 9544.6 3701.2 7744.4 2 0 1 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 39915000 16154 4393 15310 30728;30729 24626;24627 24627 2 9606 Homo sapiens 0.0662937261317893 LHIIEVGTPPTGNQPFPK Unmodified 1944.0469 0.046897198 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 2 0 1 56.008 56.026 5 1.9042E-13 17030 20230619_1881_Aki_TMTPro18x_K_F2 147.12 128.29 40776 21378 35483 42466 34836 35496 41755 38499 46885 55293 46174 47283 60110 42835 45529 59814 52131 54804 37579 19775 36515 41022 36412 36471 41853 39589 47517 54722 48016 48208 60161 45272 46997 59509 49833 52097 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 43845000 16155 826 15311 30730 24628;24629 24628 2 9606 Homo sapiens 0.11263562548879236 LHIPYAGETLK Unmodified 1240.6816 0.68157298 4623 Q9NXR7-4;Q9NXR7-3;Q9NXR7;Q9NXR7-1;C9J2G0;A0A075B7D2;F8W733 BRE BRCA1-A complex subunit BRE yes no 0 0 0 1 0 1 51.902 51.902 3 8.0431E-05 15137 20230619_1880_Aki_TMTPro18x_K_F1 121.9 107.23 35176 20421 31781 36295 31033 38761 36753 41019 50844 44943 41062 46300 53294 43509 38888 52546 48662 55812 32442 18848 32590 35357 32515 39021 37163 41838 50615 45265 43143 46839 53320 45467 40414 52798 46515 52949 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69140000 16156 4623 15312 30731 24630 24630 1 9606 Homo sapiens 0.07085945602943866 LHITPEK Unmodified 836.4756 0.47560295 1578 A0A5F9ZHN7;Q9NTJ5;F8WCQ2 SACM1L Phosphatidylinositide phosphatase SAC1 yes no 0 0 0 7 0 1 40.802 40.869 3 0.0031206 9606 20230619_1887_Aki_TMTPro18x_K_F7 117.17 9.5108 84892 48081 79436 84988 95096 88510 99257 98120 110720 108340 123010 121120 118990 102060 107700 113810 129100 120560 78305 44378 81403 82800 97532 89442 100190 99851 112630 109320 125430 121730 121050 106520 110920 114550 123260 114470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109050000 16157 1578 15313 30732 24631 24631 1 9606 Homo sapiens 0.05082417214327961 LHLAIPTR Unmodified 919.56034 0.56033563 2806 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;Q9BZE4-2;B4DHR2;Q9BZE4-3 GTPBP4 Nucleolar GTP-binding protein 1 yes no 0 0 0 4 0 1 44.763 44.807 3 0.00045148 11625 20230619_1883_Aki_TMTPro18x_K_F4 140.09 86.199 67877 21709 51789 65427 56390 74434 60901 57842 77902 59675 51546 54923 64484 48949 48551 70430 55514 55665 62402 20323 54111 62473 58499 74080 61641 60309 77332 60126 54700 55785 64624 51833 50156 69539 53050 53027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101010000 16158 2806 15314 30733 24632 24632 1 9606 Homo sapiens 0.09733787750940337 LHLGFIEIR Unmodified 1096.6393 0.63931423 4715 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 0 0 0 2.5 0.5 1 1 57.288 57.32 3 3.2751E-23 17549 20230619_1881_Aki_TMTPro18x_K_F2 185.58 103.13 100110 29505 84554 94289 67481 70830 78863 88222 115660 93292 77372 84967 111660 98243 89012 103670 82156 107230 92078 27683 86967 89477 71833 73687 80022 89070 114220 93820 82722 87074 111820 101200 90621 104260 78846 101710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 327330000 16159 4715 15315 30734;30735 24633;24634 24633 2 9606 Homo sapiens 0.09486014985213842 LHLIAQELPFDR Unmodified 1450.7932 0.79324869 953 F8W9B8;B4E0U7;B4DHG4;A0A0A0MSI8;O00471 EXOC5 Exocyst complex component 5 yes no 0 0 0 8 0 1 58.026 58.072 3 9.939E-10 17039 20230619_1888_Aki_TMTPro18x_K_F8 174.23 135.87 18231 13899 14121 16057 14315 15978 17389 18981 22225 16022 18143 19335 20485 16365 16612 20261 22513 21138 16819 12748 14702 16044 14955 16232 17504 19102 22183 16458 18913 19385 20650 17189 17304 20336 21474 20072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13782000 16160 953 15316 30736 24635 24635 1 9606 Homo sapiens 0.0858837996006514 LHLLNLGGSR Unmodified 1078.6247 0.6247268 2794 CON__Q28107 yes yes 0 0 0 5.5 0.5 1 1 48.24 48.318 3 5.7681E-14 13028 20230619_1885_Aki_TMTPro18x_K_F5 185.6 98.418 + 34887 26279 37627 41749 51278 58353 44265 41614 68071 49680 70741 81249 52740 53144 71230 45888 53736 57812 32264 24188 38227 41064 52047 57337 45760 43906 68003 50779 71759 80016 55305 55309 71003 46996 51611 54769 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 178640000 16161 2794 15317 30737;30738 24636;24637 24636 2 9606 Homo sapiens 0.0885594283708997 LHLMPEGK Unmodified 923.48987 0.48987281 70 A0A024QZY0;Q86WA6-2;Q86WA6 BPHL Valacyclovir hydrolase yes no 0 0 0 8 0 1 45.113 45.142 3 0.007469 11535 20230619_1888_Aki_TMTPro18x_K_F8 83.265 65.879 66914 27954 55623 66602 63372 64375 70234 67697 94468 65771 75178 71503 76426 60576 77259 88122 83616 71799 61598 25979 57623 63976 65420 65283 71132 68903 93990 66804 78077 72032 77991 64290 78955 87168 79860 68412 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65485000 16162 70 15318 30739 24638 24638 1 9606 Homo sapiens 0.02506746370977453 LHLVDLAGSER Unmodified 1208.6513 0.65133548 3350;873 J3KPF9;Q2UVF2;A0A087X011;E9PES4;B4DHG8;Q9Y496;Q5JRK0;Q8IWH8;Q05CT3;D3DQ90;H0Y718;Q17RI8;B7ZKX5;Q6ZMV9-3;Q6ZMV9;Q59HG1;O95239;O95239-2;Q6PKB2;B4DYE2;Q2VIQ3 KIF3A;KIF6;KIF4A;KIF4B Kinesin-like protein;Kinesin-like protein KIF3A;Kinesin-like protein KIF6;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B no no 0 0 0 5.5 0.5 1 1 47.818 47.896 3 1.1595E-05 12997 20230619_1886_Aki_TMTPro18x_K_F6 124.1 0 78712 47862 71140 72150 76036 77324 87273 83428 95098 71628 67585 66266 81181 68306 78994 82935 75928 74753 72608 44067 72975 70927 78855 77921 87557 84498 95297 72905 71249 67630 82323 71165 80216 82645 72669 71092 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 134280000 16163 873;3350 15319 30740;30741 24639;24640 24640 2 9606 Homo sapiens 0.05535586937753578 LHLYNSLTR Unmodified 1115.6087 0.60874239 2568 B4DPV7;P49589-3;A8K067;B4DKY1;A0A024RCG3;P49589-2;P49589;Q53HG6;E9PRS8;E9PLP0;C9JLN0 CARS Cysteine--tRNA ligase, cytoplasmic yes no 0 0 0 4 0 1 43.68 43.724 3 0.00011446 11190 20230619_1883_Aki_TMTPro18x_K_F4 136.99 93.706 28378 20478 24046 24299 25365 25618 27066 27053 32749 23826 22352 26087 24434 18361 27860 26214 25465 24918 26188 18790 24805 24252 26288 25846 27363 27454 32609 24329 23552 26111 25021 19617 28128 26150 24384 23683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39988000 16164 2568 15320 30742 24641 24641 1 9606 Homo sapiens 0.055562366001595365 LHNAIEGGTQLSR Unmodified 1394.7266 0.72662569 1807 O60832;A0A8Q3WLC8;A0A8Q3SIY6;A0A8Q3SIS9;A0A8Q3SJE8;A0A8Q3WLD1;A0A8Q3SIX2;C9IYT0;O60832-2;A0A8Q3WLE4;U5UA77;A0A8Q3WLW8 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 0 0 0 7 0.816 1 1 1 38.495 38.539 3 1.5794E-06 8641 20230619_1887_Aki_TMTPro18x_K_F7 139.74 100.12 27435 18477 25634 28382 30609 35522 30550 26916 40676 27443 28804 33565 27966 27943 32700 29681 34180 32955 25327 17007 26284 27919 31434 35164 31098 28123 40352 27931 30118 33587 28832 29082 33232 29996 32680 31271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 458700000 16165 1807 15321 30743;30744;30745 24642 24642 1 9606 Homo sapiens 0.04505144398194716 LHNELQSGSLR Unmodified 1252.6524 0.65239812 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9;A0A087X1U8 RRP12 RRP12-like protein yes no 0 0 0 6.5 0.5 1 1 36.933 36.999 3 1.5771E-09 8337 20230619_1886_Aki_TMTPro18x_K_F6 188.27 144.99 32449 18789 32382 33889 34889 30840 37005 38080 40889 37089 39750 42540 37885 34064 33276 44694 39620 35766 29949 17346 32939 32931 36036 31580 37315 38379 41381 37693 40771 42657 38525 35949 34332 44214 37820 34080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117710000 16166 2355 15322 30746;30747 24643 24643 1 9606 Homo sapiens 0.036178013066546555 LHNQQALSSSIEEGLR Unmodified 1780.9068 0.9067749 1303 B4DVB5;A0A1U9X8F2;A0A1U9X8F1;Q06587;A0A024RCR9;B4DW57;Q06587-2 RING1 E3 ubiquitin-protein ligase RING1 yes no 0 0 0 5.5 0.5 1 1 45.89 45.972 3 8.5851E-06 12049 20230619_1885_Aki_TMTPro18x_K_F5 105.63 85.523 49861 41800 47510 53130 54401 48596 57571 62943 56743 51735 54817 51427 61066 44397 51904 56878 48769 50353 46095 38358 48584 52679 55944 49839 57855 62999 57777 52853 56585 52021 61628 46714 52796 56582 46703 47888 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 310920000 16167 1303 15323 30748;30749 24644 24644 1 9606 Homo sapiens 0.0475577854454059 LHNQVNGTEWSWK Unmodified 1597.7637 0.76373948 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;A0A7I2YQX3;B3KWD0 XPO1 Exportin-1 yes no 0 0 0 1.5 0.5 1 1 50.016 50.045 3 0.00079686 14403 20230619_1880_Aki_TMTPro18x_K_F1 88.075 67.694 26541 22480 29642 30056 26577 32683 31592 31620 39925 34567 36854 39367 39763 36598 34696 40315 40231 45765 24571 20640 29815 29763 28012 32812 31825 32458 40062 34938 38097 39651 40274 38034 35709 40742 38477 43390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62105000 16168 3228 15324 30750;30751 24645 24645 1 9606 Homo sapiens -0.01123184056041282 LHPCPPPDFFRPCR Unmodified 1794.8446 0.84464911 2472 B4DF80;Q9H6R4-4;Q9H6R4;A0A0A0MRW6;Q9H6R4-2;Q9H6R4-3 NOL6 Nucleolar protein 6 yes no 0 0 1 4.5 0.5 1 1 46.35 46.411 4 2.2132E-08 12356 20230619_1883_Aki_TMTPro18x_K_F4 155.86 128.83 31353 20409 28499 25783 25325 33487 28898 28565 34342 34384 27981 27013 27562 29433 24342 30072 34098 31637 28932 18748 29128 25703 26711 33149 29103 29667 34444 34227 28981 27828 28046 30300 25378 30283 32514 30042 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113960000 16169 2472 15325 30752;30753 24646 24646 1 9606 Homo sapiens -0.02097942609157144 LHPEDFPEEDKK Unmodified 1482.6991 0.69907354 345 A0A024R5K6;O95298-2;O95298 NDUFC2 NADH dehydrogenase [ubiquinone] 1 subunit C2 yes no 0 0 1 4.5 0.5 1 1 44.101 44.162 4 1.317E-10 11319 20230619_1883_Aki_TMTPro18x_K_F4 163.51 132.55 273600 199120 305290 342010 392700 386890 384450 398730 400140 318390 416100 423820 390020 350680 354590 321200 438800 410470 253050 183490 309000 334010 400230 387960 388630 404380 407020 329330 425070 422960 397380 362560 365620 328410 418830 389020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 196520000 16170 345 15326 30754;30755 24647;24648 24647 2 9606 Homo sapiens -0.02296803652757262 LHPEMSNLDLTK Unmodified 1396.7021 0.70205043 2929 E9PKP7;P17480-2;P17480;A0A994J4N4;A8K962;B4DNQ1;Q05BZ1;E9PMM2;Q9BQR2 UBTF Nucleolar transcription factor 1 yes no 0 0 0 6.5 0.5 1 1 50.103 50.182 3 4.9115E-24 13986 20230619_1886_Aki_TMTPro18x_K_F6 200.98 159.44 366190 293770 331930 400270 401690 500570 446990 439990 552790 445180 450820 453270 488960 394550 414750 501170 476430 472100 338310 269820 341630 396560 413610 496910 451130 453780 552840 450160 468960 457910 494250 414620 426940 500050 455220 448730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 264630000 16171 2929 15327 30756;30757 24649 24649 1 9606 Homo sapiens 0.0195674820045042 LHPVILASIVDSYER Unmodified 1710.9305 0.93047046 2403 B4DMT5;H0YDT6;B3KSH1;O00303;A0A7I2YQA0;A0A7I2V4S2;A0A1W2PP79 EIF3F Eukaryotic translation initiation factor 3 subunit F yes no 0 0 0 2 0 1 61.165 61.176 3 0.0059703 19097 20230619_1881_Aki_TMTPro18x_K_F2 60.968 40.505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16172 2403 15328 30758 24650 24650 1 9606 Homo sapiens 0.10344244048997098 LHPWVTR Unmodified 907.50282 0.50282075 686 F5GZ00;B4DV02;A0A024RBP6;A0A024RBQ0;Q96RR4-2;Q96RR4-3;Q96RR4-7;Q96RR4 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 yes no 0 0 0 4 0 1 40.012 40.054 3 0.0051982 9561 20230619_1883_Aki_TMTPro18x_K_F4 107.32 46.356 19335 16943 20951 23339 17968 22991 19523 21420 22161 30522 31117 35243 30342 31010 31865 29535 30783 34401 17899 15559 21120 23032 18965 23229 19699 22236 22819 30487 31506 35388 31092 32029 32304 29989 29488 32610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7571400 16173 686 15329 30759 24651 24651 1 9606 Homo sapiens 0.04536945545362414 LHQDINDYNRR Unmodified 1442.7015 0.70147357 2820 D3DSY7;Q96K19-4;Q96K19-6;Q96K19-2;Q96K19 RNF170 E3 ubiquitin-protein ligase RNF170 yes no 0 0 1 6 0 1 32.594 32.631 4 3.5168E-05 6750 20230619_1886_Aki_TMTPro18x_K_F6 138.76 106.51 23877 14509 20857 23147 26645 29138 24983 24426 35457 28464 31395 35490 28090 26434 28450 33404 43144 38509 22020 13368 21538 22727 27199 28891 25601 25390 35344 28780 32284 35391 28831 27926 29759 33725 41106 36539 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9494600 16174 2820 15330 30760 24652 24652 1 9606 Homo sapiens -0.0021691040440146026 LHQEDNDYINASLIK Unmodified 1771.8741 0.87407779 2028 P18031;A8K3M3 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type yes no 0 0 0 5 0 1 51.918 51.992 3 2.2753E-06 14619 20230619_1885_Aki_TMTPro18x_K_F5 119.62 108.35 50344 23910 44201 49892 42957 43612 50297 48823 55413 61729 62766 61711 68962 53103 55420 70891 55729 68805 46383 22149 45423 48126 44900 44666 50456 49878 56492 61673 64304 62373 69493 56028 56703 70788 53409 65325 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64420000 16175 2028 15331 30761 24653 24653 1 9606 Homo sapiens 0.019015714216948254 LHQELGAK Unmodified 894.49232 0.49231565 1056 A0A0S2A4E4;A0A0M4G3H8;P35573-2;P35573-3;P35573;G1UI17 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes no 0 0 0 6 0 1 37.335 37.403 3 0.007237 8499 20230619_1886_Aki_TMTPro18x_K_F6 83.998 33.367 50524 32396 53498 47465 66682 58259 62881 65583 70283 60730 76130 68176 72495 61981 67827 53854 73436 70780 46678 29809 54244 46852 67988 58280 63865 66337 71373 61868 77620 68674 73877 63735 69281 55252 70190 67058 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42504000 16176 1056 15332 30762 24654 24654 1 9606 Homo sapiens 0.04084918100295454 LHQLAMQQTPFPPLGQTNPAFPGEK Oxidation (M) 2762.385 0.38502039 2914 E9PFP8;P57721-4;P57721;J3QT27;P57721-2;P57721-3 PCBP3 Poly(rC)-binding protein 3 yes no 0 1 0 3 0 1 58.514 58.545 4 0.00020284 17850 20230619_1882_Aki_TMTPro18x_K_F3 72.532 59.603 14862 11400 14469 15192 13150 12963 19275 15127 14757 18480 22264 21431 21803 17057 22982 18993 19828 25853 13735 10471 14718 15003 13899 13331 18936 15411 15592 18573 22474 21473 22302 17859 23154 19450 19043 24461 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11883000 16177 2914 15333 30763 24655 24655 1736 1 9606 Homo sapiens 0.07432327892183821 LHQLAMQQTPFPPLGQTNPAFPGEK Unmodified 2746.3901 0.39010577 2914 E9PFP8;P57721-4;P57721;J3QT27;P57721-2;P57721-3 PCBP3 Poly(rC)-binding protein 3 yes no 0 0 0 3 0 1 60.974 61.003 4 0.0093052 18843 20230619_1882_Aki_TMTPro18x_K_F3 57.578 44.348 22883 20538 21276 25298 20753 27112 26365 25406 29927 30733 26067 25488 29669 21258 23020 34767 27643 29915 21160 18836 21772 25176 21787 27230 26362 26216 30151 30613 27074 25981 29830 22799 23848 34409 26420 28456 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41241000 16178 2914 15333 30764 24656 24656 1 9606 Homo sapiens 0.08676631754769915 LHQLDAEK Unmodified 952.49779 0.49779495 1552 A0A494C1B8;P29144;Q5VZU9;A0A494C0U1;A0A494C0A3;A0A494C1S6 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 4 0 1 39.44 39.482 3 3.2909E-07 9318 20230619_1883_Aki_TMTPro18x_K_F4 182.76 77.629 206960 82262 200110 197790 303480 218810 229560 251130 326370 207680 252580 236310 238860 199620 213730 171460 260580 231400 190700 76493 205220 190390 304330 220480 238720 253070 323720 213270 261850 237340 243060 205740 220100 176290 248670 219260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 307900000 16179 1552 15334 30765 24657 24657 1 9606 Homo sapiens 0.019645968920940504 LHQLSLK Unmodified 837.50724 0.50723743 4756 Q9Y6C2;A0A0A0MT20;Q9Y6C2-2 EMILIN1 EMILIN-1 yes no 0 0 0 3.5 0.5 1 1 43.884 43.941 3 0.06667 11267 20230619_1883_Aki_TMTPro18x_K_F4 48.756 13.948 41692 23811 39551 40648 37225 44943 41227 45285 50950 56021 67636 73747 64248 56611 56467 65788 70043 69862 38463 21965 40330 39703 39008 45093 41671 46520 52020 56559 68489 73461 65326 59426 58357 66168 66884 66313 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146730000 16180 4756 15335 30766;30767 24658 24658 1 9606 Homo sapiens 0.0819840996828134 LHQNICR Unmodified 939.47087 0.4708687 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 3.67 3.09 1 1 1 29.005 29.036 3 0.00014512 5625 20230619_1880_Aki_TMTPro18x_K_F1 172.39 120.71 118270 38916 117410 119940 157860 141160 137490 146190 152990 67407 81005 58934 66640 57924 105550 40602 85309 57136 108950 36441 119920 114600 159970 141140 140270 146860 151850 72223 85813 60270 70341 58905 105150 42230 81624 54197 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204490000 16181 4414 15336 30768;30769;30770 24659;24660 24659 2 9606 Homo sapiens -0.0012879020007403597 LHQVYFDAPTCR Unmodified 1505.7085 0.70853279 3410 P08247 SYP Synaptophysin yes yes 0 0 0 8 0 1 44.546 44.565 3 4.1303E-07 11287 20230619_1888_Aki_TMTPro18x_K_F8 154.67 142.14 57673 33744 45849 55252 43133 40255 51112 53426 63837 50924 62044 51725 66727 58211 55767 66467 63729 68752 53143 31108 47562 53813 45222 42140 51476 53621 64182 51650 63864 52777 67447 60271 57401 66757 60933 65259 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118120000 16182 3410 15337 30771 24661 24661 1 9606 Homo sapiens -0.02409313848193051 LHSFLGDDVFLR Unmodified 1417.7354 0.73539946 2254 E9PK47;B2R825;P06737-2;P06737 PYGL Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form yes no 0 0 0 8 0 1 59.701 59.738 3 4.9919E-05 17677 20230619_1888_Aki_TMTPro18x_K_F8 102.28 75.161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16183 2254 15338 30772 24662 24662 1 9606 Homo sapiens 0.04324118034651292 LHSIILANPQDNENFIATVR Unmodified 2264.1913 0.1913296 2543 B4DMG1;Q9NP66;H0YKL0 HMG20A High mobility group protein 20A yes no 0 0 0 4.5 3.5 1 1 58.28 58.327 3 2.0725E-09 17819 20230619_1880_Aki_TMTPro18x_K_F1 116.73 107.69 26529 23432 23369 27090 27054 25746 32525 29047 37412 25838 22284 22925 30275 22277 26227 27240 26748 23155 24519 21479 24080 27047 27933 26228 32600 29373 37213 26218 23934 23387 30436 23277 26772 27067 25562 22050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105740000 16184 2543 15339 30773;30774 24663;24664 24663 2 9606 Homo sapiens 0.10980159238260967 LHSQEEDFR Unmodified 1159.5258 0.52580062 835 Q4V328-4;A0A994J436;A0A994J4V9;A0A994J6P1;A0A087WXA6;A0A994J489;A0A994J4J8;A0A994J472;A0A994J4U4;A0A994J4F7;A0A994J6V9;A8K7Z3;A0A994J7B3;A0A994J484;A0A994J6U6;A0A994J720;A0A994J4V2;A0A994J488;A0A994J783;Q4V328;A0A087WW92;A0A994J745;A0A994J4N3;A0A994J4H0;A0A994J6Q0;A0A994J4B5;A0A994J4E1;A0A994J7A3;A0A994J6M6;A0A994J463;A0A994J772;A0A994J724;A0A994J4H5;A0A994J4M4;A0A994J4A2;A0A994J3Y7;A0A994J799;Q4V328-2;A0A087WWF2;A0A087WZF5;A0A994J7N3;A0A087WV84 GRIPAP1 GRIP1-associated protein 1 yes no 0 0 0 1.5 0.5 1 1 34.022 34.05 3 2.0246E-12 7612 20230619_1880_Aki_TMTPro18x_K_F1 204.52 142.52 68845 39607 66162 71387 77184 77957 73962 73834 88687 75833 98584 99888 98301 84396 76003 96266 98930 100370 63520 36564 67618 69514 79181 78206 75232 75787 89849 77289 100640 99820 99292 88176 79055 96724 94443 95284 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 71992000 16185 835 15340 30775;30776 24665;24666;24667 24665 3 9606 Homo sapiens -0.047581249184759145 LHSVCTLSK Unmodified 1043.5434 0.54336494 2076 A8K5J1;P11172;B5LY71;P11172-3;B5LY69;E9PFD2;B5LY67 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes no 0 0 0 2.5 0.5 1 1 40.986 41.052 3 4.4915E-05 10277 20230619_1881_Aki_TMTPro18x_K_F2 135.63 92.122 156410 97819 149020 150460 218110 192950 180320 171450 245680 115030 125760 132050 134740 109490 152260 127060 147870 110340 144360 90073 152980 148120 219830 191440 185890 175150 241450 120070 135160 132560 138090 114590 154120 126580 141270 105120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182300000 16186 2076 15341 30777;30778 24668 24668 1 9606 Homo sapiens 0.02333499082851631 LHTAVVSTPPR Unmodified 1176.6615 0.66150624 4455 Q9BW92;U3KQG0;Q9BW92-2;Q5T5E9;B4DQF3 TARS2 Threonine--tRNA ligase, mitochondrial yes no 0 0 0 2 0 1 35.676 35.733 3 5.9685E-05 7939 20230619_1881_Aki_TMTPro18x_K_F2 108.35 81.094 61680 35717 69727 73493 87057 95030 79792 87431 91181 71631 102050 103050 86129 73184 96012 56583 101030 97076 56991 33040 70445 71323 88839 94208 81261 89404 92569 74204 103520 102120 88867 75640 97508 59530 96590 91788 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29301000 16187 4455 15342 30779 24669;24670 24669 2 9606 Homo sapiens 0.08024194662993978 LHTDDELNWLDHGR Unmodified 1719.7965 0.79649617 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 2.5 0.5 1 1 48.706 48.779 4 1.69E-06 13599 20230619_1882_Aki_TMTPro18x_K_F3 122.45 109.04 60655 30617 35860 38506 53325 51136 48788 51384 62735 31637 48360 65757 57691 47041 40907 51701 33838 52280 55762 28161 38756 38409 53915 50765 49866 51950 62437 34112 50798 64553 57758 49360 41571 51889 32572 49582 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 586590000 16188 1292 15343 30780;30781 24671;24672 24672 2 9606 Homo sapiens -0.034610217238650876 LHTGPLPEQCR Unmodified 1306.6452 0.64520425 1892 J3KR33;A0JLT2-2;A0JLT2 MED19 Mediator of RNA polymerase II transcription subunit 19 yes no 0 0 0 6 0 1 36.085 36.146 3 0.00081396 8017 20230619_1886_Aki_TMTPro18x_K_F6 103.43 75.908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16189 1892 15344 30782 24673 24673 1 9606 Homo sapiens 0.004147454345684309 LHTLDTCLK Unmodified 1099.5696 0.56957969 273 B3KMB8;A0A024R3X5;Q9NYY8-2;Q9NYY8 FASTKD2 FAST kinase domain-containing protein 2 yes no 0 0 0 8 0 1 45.684 45.722 3 5.6431E-11 11787 20230619_1888_Aki_TMTPro18x_K_F8 218.55 150.98 64468 35425 61219 67945 73524 74236 80663 78747 110330 88854 80896 85049 91117 78727 73230 102630 91483 95384 59465 32742 62687 65975 75586 74656 81784 80398 109520 89194 84836 86308 91864 82671 75952 102250 87381 90658 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35275000 16190 273 15345 30783 24674 24674 1 9606 Homo sapiens 0.02377768254291368 LHTLGDNLLDSR Unmodified 1352.7048 0.70482762 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;A0A7I2V3I5;A0A7I2V2T9;A0A7I2V3J7;A0A7I2V682;A0A7I2V407;A0A7I2V2J0;A0A7I2V5R0;E7EPA6;A0A7I2V2R2;A0A7I2V5T9;C9J296 LAMB1 Laminin subunit beta-1 yes no 0 0 0 6 0 1 48.785 48.863 3 2.4762E-13 13386 20230619_1886_Aki_TMTPro18x_K_F6 206.03 158.2 53223 33998 43592 47782 57185 50933 55162 54388 74355 56382 53046 50642 63785 46682 52871 69680 53481 56225 49072 31269 45298 47156 58229 51364 56300 55372 73790 56739 55872 51583 64197 49521 54084 68848 51184 53535 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 307880000 16191 3015 15346 30784 24675 24675 1 9606 Homo sapiens 0.04258339649595655 LHTVQPK Unmodified 821.47594 0.4759373 3655;1909 A2A3N6;P55036;Q5VWC4;P55036-2;A6PVX3 PIPSL;PSMD4 Putative PIP5K1A and PSMD4-like protein;26S proteasome non-ATPase regulatory subunit 4 no no 0 0 0 1.5 0.5 1 1 35.074 35.102 3 0.001753 8020 20230619_1880_Aki_TMTPro18x_K_F1 134.85 54.557 173490 62683 177840 201230 289530 288560 217930 262580 271790 190950 290630 325000 250930 244500 249990 141360 291780 289340 159900 58709 182070 192640 289810 284300 225650 268000 274230 200980 295790 320820 257520 249390 255900 152400 278750 273260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 266570000 16192 1909;3655 15347 30785;30786 24676;24677 24676 2 9606 Homo sapiens 0.05805836934189301 LHVAILER Unmodified 949.5709 0.57090032 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1 PLEC Plectin yes no 0 0 0 8 0 1 45.102 45.13 3 0.00069243 11533 20230619_1888_Aki_TMTPro18x_K_F8 126.52 71.973 28183 19060 26511 30736 27880 32174 34698 38931 41543 31887 28892 28703 37463 26706 31113 35260 30502 26427 26019 17555 27123 30088 29054 32554 34797 39098 41413 32514 30612 29233 37629 28078 31737 34794 29161 25209 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83096000 16193 3921 15348 30787 24678 24678 1 9606 Homo sapiens 0.09409770405375184 LHVDPENFR Unmodified 1125.5567 0.55670682 2797 CON__Q3SX09;B3VL05;P68871;C8C504;D1MGQ0;Q9BWU5;Q52MT0;Q6J1Z7;Q6V0K9;Q8IUL9;Q8IZI0;E9PFT6;B3VL86;B2M1S8;Q9UK54;Q9GZL9;Q9BWV6;A0A2R8Y7R2;Q4F786;P02042;Q0Z944;Q14473;Q3LR79;Q670S4;Q4TZM4;D9YZU5;A0A481SHK9;E9NGZ5;A0N071;A0A3G5AXY7;B2M1S6;A1YZ08;Q5XTR9;Q3Y9I8;A0A1B4WRL5;Q4JLR8;Q4TWB7 HBB;HBD;HBD/HBB Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta yes no 0 0 0 5 1.41 1 1 1 1 1 43.426 43.499 3 7.404E-07 10997 20230619_1883_Aki_TMTPro18x_K_F4 166.09 115.98 + 82005 65343 114890 131380 183300 187320 164570 152610 243690 214310 326220 430250 249980 275650 348860 272300 308460 490660 76067 60335 115120 127800 184410 184300 169400 160060 246740 219860 328330 421290 262590 289140 350430 286100 296790 463050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3990499999.9999995 16194 2797 15349 30788;30789;30790;30791;30792 24679;24680 24679 2 9606 Homo sapiens -0.0010492681358300615 LHVENEDKK Unmodified 1110.5669 0.56693715 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 1 4.5 0.5 1 1 36.079 36.147 4 0.00078516 7988 20230619_1883_Aki_TMTPro18x_K_F4 110.39 73.276 212760 97020 265930 251540 394680 317340 323580 367200 339230 209170 333290 351090 263240 246680 323160 138540 340490 294400 196600 90264 267430 242010 396730 316980 330970 367320 343900 224190 339430 346230 273880 252200 327450 150340 325290 278140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133800000 16195 2181 15350 30793;30794 24681;24682 24681 2 9606 Homo sapiens 0.01607636120979805 LHVEVAK Unmodified 794.46504 0.46503826 2579 B4DRS4;O43719;Q5H919;Q5H918 HTATSF1 HIV Tat-specific factor 1 yes no 0 0 0 6.5 0.5 1 1 40.987 41.068 3 0.0019498 9687 20230619_1887_Aki_TMTPro18x_K_F7 129.4 57.164 189850 91838 155260 182770 244890 200200 197120 198520 299290 195840 231550 213160 224470 198570 191180 231620 248070 231170 174840 84997 162010 177150 245730 201110 204570 202860 296100 198840 240240 215280 227880 207010 198340 232090 236690 219630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 210840000 16196 2579 15351 30795;30796 24683;24684 24684 2 9606 Homo sapiens 0.05958434559909165 LHVGNISPTCTNQELR Unmodified 1837.9105 0.91048007 4410 Q9BQ04;E9PLB0;E9PM61;U3KQD5 RBM4B RNA-binding protein 4B yes no 0 0 0 7.5 0.5 1 1 43.837 43.887 3 1.3907E-11 11066 20230619_1888_Aki_TMTPro18x_K_F8 164.66 142.08 21174 15993 20152 19005 23938 22558 21307 25348 30286 25818 27295 23232 25572 18076 22536 26212 23362 24581 19562 14672 20599 19004 24484 22616 21923 25693 30217 25990 28035 23546 25984 19264 23036 26107 22353 23360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13456000 16197 4410 15352 30797;30798 24685 24685 1 9606 Homo sapiens 0.025041250467211285 LHVIFGGTK Unmodified 970.56 0.56000128 466 A0A024R7P3;A0A024R7N2;Q9HD20-2;Q9HD20 ATP13A1 Manganese-transporting ATPase 13A1 yes no 0 0 0 5 0 1 49.174 49.25 3 0.00071667 13448 20230619_1885_Aki_TMTPro18x_K_F5 105.52 78.422 63200 42279 56694 57667 66034 70127 75678 73739 106540 32940 31185 31350 37446 25974 47280 35976 38372 33562 58323 38864 58287 57139 68154 70028 76614 73989 103540 35567 35844 31761 38479 27526 47347 35893 36767 31920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53391000 16198 466 15353 30799 24686 24686 1 9606 Homo sapiens 0.07354368031087688 LHYAFQTEGK Unmodified 1192.5877 0.58767259 1408;2680 B1AXG1;P51812;A0A384MDW3;B7ZB17;B4DG22;B4DKZ2;Q15349-2;Q15349-3;Q15349;F2Z2J1;Q9UK32-2;Q9UK32;B7Z3B5;D6RE03;D6RA62;A0A2R8Y7S9;D6R910;D6RHW7;B7Z2K7;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;E9PMM7;E9PAN7 RPS6KA3;RPS6KA2;RPS6KA6;RPS6KA1 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-2;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-6;Ribosomal protein S6 kinase alpha-1 no no 0 0 0 8 0 1 44.911 44.94 3 8.5774E-06 11448 20230619_1888_Aki_TMTPro18x_K_F8 136.63 86.342 83034 46576 73083 71584 58026 62710 79948 75485 89705 100520 100960 95142 111870 86063 81992 115670 104320 89636 76553 42911 74833 70125 62068 64362 79658 76916 91330 100050 103460 96564 112350 90645 85315 114210 99492 85466 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98472000 16199 1408;2680 15354 30800 24687 24687 1 9606 Homo sapiens -0.00091773499343617 LHYCVSCAIHSK Unmodified 1473.6857 0.68568885 643 A0A024RB14;P62854;Q5JNZ5;Q76N56 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 0 0 0 3 0 1 41.238 41.297 4 3.6772E-10 10122 20230619_1882_Aki_TMTPro18x_K_F3 189.33 177.56 213700 66981 184320 194620 194130 145890 212400 201420 163230 148280 62423 54345 164280 86558 59460 157940 132800 110500 196610 62662 189800 185250 200720 152430 211550 200570 165360 149800 73146 60680 159220 92281 66879 154590 126190 105540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 466330000 16200 643 15355 30801 24688 24688 1 9606 Homo sapiens -0.03220656237294861 LHYGLPVVVK Unmodified 1123.6754 0.67536539 209 A0A2R8Y804;B4DSW9;A0A2R8Y543;A0A2R8Y5C3;B4DL06;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y7Z0;B5BU28;A0A024R2Q3;A0A2R8Y5A3;P35222;A0A2R8Y6G0;A0A2R8Y815 CTNNB1 Catenin beta-1 yes no 0 0 0 4 0 1 52.697 52.721 3 0.0013636 15226 20230619_1883_Aki_TMTPro18x_K_F4 99.802 85.808 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16201 209 15356 30802 24689 24689 1 9606 Homo sapiens 0.11847472162094164 LHYGTDPCTGQPFR Unmodified 1647.7464 0.74637486 4254 Q8NFF5-2;Q8NFF5;Q8NFF5-3;Q5T196;B3KQW9;Q8NFF5-4;Q8NFF5-5 FLAD1 FAD synthase;Molybdenum cofactor biosynthesis protein-like region;FAD synthase region yes no 0 0 0 7.5 0.5 1 1 43.181 43.226 3 2.0538999999999998E-22 10568 20230619_1887_Aki_TMTPro18x_K_F7 180.61 167.74 80585 52717 84216 79382 98021 106180 95323 100090 115840 88593 93346 88879 90328 81477 81488 95960 99826 94059 74449 48519 85425 78312 100650 105160 96906 102320 115880 90216 96661 90009 91928 85034 84108 96056 95295 89379 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114400000 16202 4254 15357 30803;30804 24690;24691 24690 2 9606 Homo sapiens -0.05158847653410703 LHYNEGLNIK Unmodified 1199.6299 0.62987176 2890 E7EMN6;P41236;Q6NXS1;Q6ZU68 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2;Protein phosphatase inhibitor 2-like protein 3 yes no 0 0 0 7.5 0.5 1 1 46.327 46.39 3 9.9751E-06 12056 20230619_1888_Aki_TMTPro18x_K_F8 152.54 110.2 224010 98674 198600 226440 176010 178460 234620 241560 252750 312320 302300 292540 329340 261920 272220 329680 289400 331740 206350 91604 203680 217380 186100 185370 233800 244300 258700 311050 308910 296870 332390 274900 279100 330150 277020 314910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 438060000 16203 2890 15358 30805;30806 24692 24692 1 9606 Homo sapiens 0.038042019090198664 LHYNVTTTR Unmodified 1103.5724 0.57235688 1988 A7BG63;B7Z450;B7Z1G6;Q53GX0;Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-7;Q14680-6;Q14680 MELKV4;MELK Maternal embryonic leucine zipper kinase yes no 0 0 0 2 0 1 35.337 35.394 3 0.012258 7849 20230619_1881_Aki_TMTPro18x_K_F2 68.335 38.568 37687 28833 35715 33655 42059 44396 38574 37596 64426 37259 41609 40486 41095 34879 38794 42382 45406 41408 34819 26447 36522 33741 43133 43931 39872 38867 63171 37842 43724 40780 41868 36557 39872 42407 43353 39355 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28368000 16204 1988 15359 30807 24693 24693 1 9606 Homo sapiens 0.02471359703440612 LHYYETPTGIK Unmodified 1320.6714 0.67140222 2280 I3L3S0;B2RA50;Q9Y5R8 TRAPPC1 Trafficking protein particle complex subunit 1 yes no 0 0 0 8 0 1 46.595 46.643 3 0.00012599 12128 20230619_1888_Aki_TMTPro18x_K_F8 114.83 98.58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16205 2280 15360 30808 24694 24694 1 9606 Homo sapiens 0.023893378776847385 LIAALSTPSQQVQESVASCLPPLVPAIK Unmodified 2916.5994 0.59942984 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 5 0 1 65.346 65.39 4 1.0018E-08 20333 20230619_1885_Aki_TMTPro18x_K_F5 97.509 81.809 11950 12291 13304 13968 10880 15882 10943 14287 14850 14763 16004 14537 16089 12341 15198 15825 16539 19656 11078 11259 13371 13996 11530 15871 11169 14709 14954 14887 16358 14701 16366 13002 15548 16057 15833 18618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47376000 16206 2863 15361 30809 24695 24695 1 9606 Homo sapiens 0.21779410197405014 LIADVAPSAIR Unmodified 1124.6554 0.65535823 3568 Q6FHX6;P39748;F5H1Y3 FEN1 Flap endonuclease 1 yes no 0 0 0 7.5 0.5 1 1 54.181 54.252 3 6.9364E-05 15388 20230619_1888_Aki_TMTPro18x_K_F8 125.3 78.963 63046 50999 51799 56077 48668 56541 58400 47646 59183 62575 63512 59994 70052 51628 57229 64972 69502 69093 58207 46741 53536 56232 51102 56956 58334 49736 60446 62367 65215 60745 70630 54288 59138 65282 66378 65583 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75262000 16207 3568 15362 30810;30811 24696;24697 24697 2 9606 Homo sapiens 0.09801676431447959 LIADVAPSAIRENDIK Unmodified 1723.9468 0.9468488 3568 Q6FHX6;P39748;F5H1Y3 FEN1 Flap endonuclease 1 yes no 0 0 1 6 0 1 54.527 54.604 3 0.00068386 15855 20230619_1886_Aki_TMTPro18x_K_F6 78.244 55.009 50601 61692 58351 50821 56837 45115 50694 54283 46927 58276 52698 38815 46192 38449 54073 57708 50227 44058 46991 56342 58528 52242 58813 46382 51413 54912 48327 58051 53443 40337 47713 40695 54654 56908 48051 42014 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130550000 16208 3568 15363 30812 24698 24698 1 9606 Homo sapiens 0.11383325215092555 LIADVGLVGFPNAGK Unmodified 1469.8242 0.82421447 1934 C9J8R7;C9JNI1;A4D1E9 GTPBP10 GTP-binding protein 10 yes no 0 0 0 2 0 1 63.444 63.452 3 0.027254 20184 20230619_1881_Aki_TMTPro18x_K_F2 49.487 31.175 31802 21026 29038 32836 23416 29095 31426 34019 31676 48815 52144 51524 55108 50957 48463 55937 53021 56376 29350 19359 29671 32131 25008 29798 31262 34805 33130 48589 52659 52168 55851 52828 49691 56140 50709 53530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121080000 16209 1934 15364 30813 24699 24699 1 9606 Homo sapiens 0.10809533274368732 LIAEEGVDSLNVK Unmodified 1385.7402 0.74021007 2831 D3DVQ1;O95202 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes no 0 0 0 4.5 0.5 1 1 58.262 58.291 3 2.5614E-05 17611 20230619_1883_Aki_TMTPro18x_K_F4 117.21 96.623 284760 238560 263680 303940 246880 287600 322950 321090 334640 334180 331380 344490 367600 312680 336510 376910 368830 373390 263190 218930 269650 301360 259910 292780 321580 326110 340180 337290 341870 348200 372580 326990 344740 377430 352610 354660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150230000 16210 2831 15365 30814;30815 24700;24701 24700 2 9606 Homo sapiens 0.0627695738676266 LIAINANDPEASK Unmodified 1354.7092 0.70924429 4504;1998 A8K0P2;Q9H2U2-6;Q9H2U2-3;Q9H2U2;Q9H2U2-2;H0Y9D8;B4DR66;D6R967;B4DFH3 PPA2 Inorganic pyrophosphatase 2, mitochondrial no no 0 0 0 5 0 1 53.483 53.555 2 0.0045096 15281 20230619_1885_Aki_TMTPro18x_K_F5 102.52 89.323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16211 1998;4504 15366 30816 24702 24702 1 9606 Homo sapiens 0.046078040724978564 LIALLEVLSQK Unmodified 1225.7646 0.76457433 3484;3299;3886 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98;Q14315;Q14315-2;O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;A0A804HJC2 FLNA;FLNC;FLNB Filamin-A;Filamin-C;Filamin-B no no 0 0 0 5.5 0.5 1 1 67.757 67.8 2;3 3.4097E-11 21280 20230619_1885_Aki_TMTPro18x_K_F5 190.24 160.25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16212 3484;3886;3299 15367 30817;30818 24703;24704 24703 2 9606 Homo sapiens 0.16072262330931153 LIANNTTVER Unmodified 1129.6091 0.60913632 3368 Q6FI97;Q53FS0;O96019;O96019-2;D3DNS0 BAF53A;ACTL6A Actin-like protein 6A yes no 0 0 0 5 0.816 1 1 1 40.928 41.003 2 2.0207E-13 9943 20230619_1886_Aki_TMTPro18x_K_F6 219.8 147.31 479890 367660 418430 434090 561810 623120 537830 522850 644860 575650 632740 600890 656630 559900 542310 670880 710640 601400 443090 337260 432450 435390 571890 613460 546840 542340 650310 580010 650450 607780 664160 584640 563420 668190 677560 572350 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 750560000 16213 3368 15368 30819;30820;30821 24705;24706;24707 24707 3 9606 Homo sapiens 0.04951611529349975 LIAPVAEEEATVPNNK Unmodified 1693.8887 0.88866522 1577 P07195;Q5U077;A0A5F9ZHM4;A0A3B3IS95;A8MW50;C9J7H8;F5H793 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 3.73 1.21 2 3 3 2 1 55.015 55.052 2;3;4 2.2861E-14 16401 20230619_1882_Aki_TMTPro18x_K_F3 230.65 196.12 176900 157480 161090 160920 156910 240950 189110 170930 265280 199510 199120 212020 232400 188440 198890 233430 232720 241080 163540 144190 164990 163300 164890 235860 191050 180230 263120 200730 208920 213870 234550 197590 204890 234180 222400 228870 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 7459699999.999999 16214 1577 15369 30822;30823;30824;30825;30826;30827;30828;30829;30830;30831;30832 24708;24709;24710;24711 24709 4 9606 Homo sapiens 0.0694764356981068 LIASSLVAGEK Unmodified 1086.6285 0.62847478 495 Q14C86-6;Q14C86;Q14C86-2;Q14C86-5;Q14C86-4;A0A024R8A2;A0A024R862;F8W9S7;Q14C86-3;A0A024R875;B4DK42;C9IZ08;B4DGD8;B0QZ65 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 0 0 0 4.5 3.5 1 1 56.094 56.125 3 0.0027535 16942 20230619_1880_Aki_TMTPro18x_K_F1 73.781 52.911 109450 82188 109270 118750 104130 132620 118410 113200 138450 127530 120780 135110 138160 109050 126260 137560 140420 145530 101150 75561 111010 117040 109110 132530 119180 117410 139230 128380 125620 135880 139860 114910 129440 138190 134250 138120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56619000 16215 495 15370 30833;30834 24712;24713 24712 2 9606 Homo sapiens 0.08862567820256118 LIASVAGSVER Unmodified 1100.619 0.61897272 1922 A3KFL5;Q13868;B4E001;A0A8I5KV47;A0A8I5KVY3;A3KFL2;Q13868-3;Q13868-2;A0A8I5QL34;A0A8I5KRS5;A0A8I5KYK9 EXOSC2 Exosome complex component RRP4 yes no 0 0 0 8 0 1 53.014 53.089 2 4.106E-06 14881 20230619_1888_Aki_TMTPro18x_K_F8 160.75 123.28 401240 315330 362950 399470 352810 384800 393110 363380 421490 468630 465280 486700 500680 412630 416360 499310 738590 494340 370630 289430 371920 396290 368390 389790 394980 375720 429850 468440 476960 490630 506170 432720 442970 499870 701870 470470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173930000 16216 1922 15371 30835 24714 24714 1 9606 Homo sapiens 0.07268799534745085 LIASYCNVGDIEGASK Unmodified 1695.8138 0.81378572 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 6.25 0.829 1 1 2 57.802 57.86 2;3 1.1031E-18 16946 20230619_1887_Aki_TMTPro18x_K_F7 233.24 200.29 496250 416610 416150 469220 442240 469590 457010 525040 492150 577390 568900 624360 622720 496070 587170 683010 565530 708240 458330 381860 430060 469720 457760 476270 461360 533760 503000 581760 582890 627330 631830 526000 597100 684430 542290 671900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 994790000 16217 1723 15372 30836;30837;30838;30839 24715;24716;24717 24717 3 9606 Homo sapiens -0.006288622330885119 LICCDILDVLDK Unmodified 1475.7364 0.73638702 3709 V9HW98;P62258;G9K389;G9K388;P62258-2;B7ZA86;B4DJB0;K7EIT4 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 0 0 5.67 1.49 1 1 2 2 2 1 65.075 65.108 2;3 1.8659E-09 20131 20230619_1887_Aki_TMTPro18x_K_F7 209.21 123.35 1579800 1238400 1443800 1551500 1117500 1322200 1409000 1421700 1255000 1868700 1871400 1931200 1947800 1733300 1345800 2013200 1377300 2342000 1459400 1136500 1473700 1538300 1194800 1356700 1400400 1458000 1314300 1865100 1894100 1950600 1956700 1809600 1385000 2034800 1324200 2217400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4772700000 16218 3709 15373 30840;30841;30842;30843;30844;30845;30846;30847;30848 24718;24719;24720 24720 3 9606 Homo sapiens 0.017548282970210494 LICDVSR Unmodified 861.43784 0.43783723 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 43.631 43.723 2 0.002194 11077 20230619_1885_Aki_TMTPro18x_K_F5 125.62 80.231 251360 177980 191940 199300 260780 257990 242470 242600 329680 140780 142710 113980 133700 110320 174030 162990 170560 86165 231780 163230 200960 200350 265010 256170 248040 246130 322890 147310 154720 117090 138750 116610 175970 158720 162640 82964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167940000 16219 3650 15374 30849;30850 24721;24722 24721 2 9606 Homo sapiens 0.0015758295721752802 LICGFMDDCK Unmodified 1257.5192 0.51920038 4310 Q92896;Q92896-3;Q92896-2;H3BM42;H3BQT1;H3BQU9 GLG1 Golgi apparatus protein 1 yes no 0 0 0 6.5 0.5 1 1 60.545 60.595 3 0.065746 18081 20230619_1887_Aki_TMTPro18x_K_F7 42.718 35.072 59225 46392 57558 60166 59476 73404 65520 68162 81167 77219 67084 68890 74079 66125 71016 78129 74631 78575 54736 42592 58665 59797 61875 73073 66197 70212 81273 77321 69818 70207 75270 68935 72507 78327 71399 74612 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50685000 16220 4310 15375 30851;30852 24723 24723 1 9606 Homo sapiens -0.09925845457360083 LICTIQQHHK Unmodified 1276.671 0.67102507 2710 Q8TEQ6;B7ZLC9;Q58EZ8 GEMIN5 Gem-associated protein 5 yes no 0 0 0 2.5 0.5 1 1 40.127 40.191 4 2.7766E-05 9671 20230619_1882_Aki_TMTPro18x_K_F3 144.77 100.45 232190 179660 239470 230140 290130 312840 266720 254640 313570 191400 202080 195690 189960 168940 244200 205650 235700 180330 214690 164930 243340 229330 296700 308710 271650 262480 312020 197240 212150 197670 196960 177010 246660 204810 225220 171750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133290000 16221 2710 15376 30853;30854 24724;24725 24724 2 9606 Homo sapiens 0.04375639676845822 LIDDEVR Unmodified 858.4447 0.44469675 1777 D3DUJ0;A0A8I5KVV1;Q8TA92;Q9Y4W6;A0A8I5QJR7 AFG3L2 AFG3-like protein 2 yes no 0 0 0 1.5 0.5 1 1 44.271 44.313 2 0.012321 12004 20230619_1880_Aki_TMTPro18x_K_F1 115.46 64.604 58051 45486 56664 52849 75462 78205 74019 75266 87810 70439 80593 80531 82642 72232 72302 83833 98636 85689 53654 41715 57938 53123 76832 77100 75126 76929 88336 71788 83109 81046 83836 75384 75213 84133 94030 81415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45270000 16222 1777 15377 30855;30856 24726 24726 1 9606 Homo sapiens 0.009812191094397349 LIDDMVAQVLK Unmodified 1243.6846 0.68460945 3600 Q53GL5;P48735;P48735-2;Q13584;B4DSZ6;H0YL11 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] yes no 0 0 0 7 0 1 65.383 65.409 3 0.0011337 20272 20230619_1887_Aki_TMTPro18x_K_F7 89.548 58.676 24428 22608 20511 25015 24553 24827 28057 25888 29130 27175 28203 29375 32761 29698 28113 29978 31022 35962 22577 20712 21250 25067 25265 25159 28108 26419 29580 27469 29189 29731 33084 30641 28841 30452 29688 34076 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49986000 16223 3600 15378 30857 24727 24727 1 9606 Homo sapiens 0.07251452665445868 LIDELENSQK Unmodified 1187.6034 0.60338224 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9;H0YHT2 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 0 0 2 0 1 57.554 57.569 3 0.048753 17629 20230619_1881_Aki_TMTPro18x_K_F2 56.043 31.251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16224 4170 15379 30858 24728 24728 1 9606 Homo sapiens 0.017084682270251506 LIDFGIAHK Unmodified 1012.5706 0.57056597 2359 B3KNJ3;O43293-2;O43293 DAPK3 Death-associated protein kinase 3 yes no 0 0 0 2 0 1 55.545 55.566 3 0.0008337 16840 20230619_1881_Aki_TMTPro18x_K_F2 101.65 0 24492 19425 25778 24184 21599 21281 22616 21625 24573 35435 34794 29022 34638 28143 31022 35009 33081 35622 22653 17826 25999 24003 22770 21762 22829 22441 25378 34860 35169 29736 35169 29439 31746 35092 31649 33818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4854300 16225 2359 15380 30859 24729 24729 1 9606 Homo sapiens 0.06478350685517853 LIDFLECGK Unmodified 1093.5478 0.54778161 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3KRZ1;J3QSF1 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 6.5 0.5 1 1 63.662 63.701 3 0.0008337 19490 20230619_1887_Aki_TMTPro18x_K_F7 101.65 83.335 545730 468600 482720 554440 445930 548960 454250 558820 597960 652200 533240 467490 677000 607300 201610 908640 352500 600900 504290 429670 495460 552840 467220 555700 462400 572340 599210 648610 555180 488660 664090 637320 225810 888850 337530 573080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 927530000 16226 3137 15381 30860;30861 24730;24731 24731 2 9606 Homo sapiens 0.004749635057123669 LIDFLESGK Unmodified 1020.5492 0.54916182 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 7 0 1 63.755 63.785 2 7.2602E-08 19547 20230619_1887_Aki_TMTPro18x_K_F7 176.6 125.97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16227 1328 15382 30862 24732 24732 1 9606 Homo sapiens 0.03970920866140659 LIDHLENTK Unmodified 1081.5768 0.57677356 633 Q53GJ1;Q9H4E3;A0A024RAS3;Q9H0S4-2;Q9H0S4;A4UCU0;F5H1N9 E4-DBP;hCG_27698;DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 0 0 0 5.5 0.5 1 1 47.192 47.271 3 0.0042377 12589 20230619_1885_Aki_TMTPro18x_K_F5 76.1 58.368 88716 71673 75869 90117 80013 98623 101020 95042 102340 78471 91382 91115 105130 70058 75079 127010 95862 78642 81929 65774 78315 89586 83436 98963 100650 96935 103650 80603 94847 91353 105330 75962 78307 123860 91400 75271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 483120000 16228 633 15383 30863;30864 24733 24733 1 9606 Homo sapiens 0.03924824126352178 LIDIFYPGDQQSVTFGTK Unmodified 2028.0204 0.020407676 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 2 0 1 64.858 64.865 3 0.010094 20734 20230619_1881_Aki_TMTPro18x_K_F2 60.618 48.058 25359 17584 23553 22374 19854 24851 25509 22962 23730 34973 32173 29749 35459 27770 30199 35378 35896 42830 23412 16149 24018 22238 21085 24893 25347 23911 24664 34524 32740 30372 35820 29147 31146 35824 34338 40576 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55960000 16229 3654 15384 30865 24734 24734 1 9606 Homo sapiens 0.047518288668698005 LIDIQEK Unmodified 857.48583 0.48583328 1588 Q15154;Q15154-5;H0YBA1;D3DSQ0;A0A5H1ZRS1;B9EIS5;A2RUU9;Q15154-2;Q15154-4;A0A4W8VX11 PCM1 Pericentriolar material 1 protein yes no 0 0 0 4.5 0.5 1 1 51.875 51.925 2 0.068805 14882 20230619_1883_Aki_TMTPro18x_K_F4 81.296 0 254160 198660 198050 233620 242940 263890 244790 254540 304660 275370 287110 308250 327040 285240 248560 384190 332730 315230 234520 182210 206730 233450 249040 264380 248540 261220 306290 278270 297200 310820 328930 300050 259520 380230 317420 300200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 306230000 16230 1588 15385 30866;30867 24735 24735 1 9606 Homo sapiens 0.05138980148910832 LIDLHSPSEIVK Unmodified 1349.7555 0.7554662 3681 P60866;P60866-2;A0A7P0S5H5;G3XAN0 RPS20 40S ribosomal protein S20 yes no 0 0 0 7.5 0.5 1 1 54.284 54.351 3 3.5007E-13 15456 20230619_1887_Aki_TMTPro18x_K_F7 200.82 171.15 261300 330410 342760 292100 351680 305610 376380 295190 273530 275520 269650 177490 252760 156500 463840 168490 149040 163470 243060 301880 341170 298750 364020 308310 374850 301980 284450 276470 276050 184080 267740 163140 448940 169820 145750 155260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4625600000 16231 3681 15386 30868;30869 24736 24736 1 9606 Homo sapiens 0.0945786897459584 LIDSWMGK Unmodified 948.47389 0.47388839 635 A0A024RAV2;P46063 RECQL ATP-dependent DNA helicase Q1 yes no 0 0 0 1.5 0.5 1 1 61.838 61.843 2 0.0074216 19427 20230619_1881_Aki_TMTPro18x_K_F2 107.66 45.665 73579 58262 81374 73732 71077 107100 86744 96818 97635 85515 83148 88688 98037 72812 80477 90606 86799 91338 68083 53474 81854 73641 75275 105430 86931 99250 98259 87137 86673 89349 98684 76623 82548 90778 83019 86729 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60936000 16232 635 15387 30870;30871 24737 24737 1 9606 Homo sapiens -0.0024095986592556073 LIDSWMGK Oxidation (M) 964.4688 0.46880301 635 A0A024RAV2;P46063 RECQL ATP-dependent DNA helicase Q1 yes no 0 1 0 8 0 1 55.309 55.371 3 0.020046 15890 20230619_1888_Aki_TMTPro18x_K_F8 65.038 48.835 36070 27617 33171 37235 36641 37769 40205 37734 46836 39622 35710 40583 46191 33986 35203 44739 41318 43004 33317 25368 34013 36813 37871 38153 40521 38614 46899 39984 37647 40922 46261 35866 36380 44660 39485 40857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14366000 16233 635 15387 30872 24738 24738 375 1 9606 Homo sapiens -0.014852637285457604 LIDVLENR Unmodified 970.54475 0.54474515 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8;A0A8V8TQ76;A0A8V8TRI2 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 0 0 4 0 1 58.511 58.513 2 0.01247 17742 20230619_1883_Aki_TMTPro18x_K_F4 95.741 62.621 106750 86006 102180 103220 103990 118580 116240 114260 122420 121380 121260 115270 131230 107720 109360 121910 125530 132660 98664 78892 104220 103050 108230 118640 116700 117210 124350 122110 124860 117060 132560 112170 112550 122850 120000 125860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61485000 16234 117 15388 30873 24739 24739 1 9606 Homo sapiens 0.0582945644322308 LIDVNHYAK Unmodified 1071.5713 0.57129425 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 5.33 3.09 1 1 1 47.097 47.143 3 0.00053284 12310 20230619_1888_Aki_TMTPro18x_K_F8 111.61 54.574 699610 515780 603790 694490 599040 792460 774700 747010 886570 894290 900810 933870 1048900 810470 822560 1028700 922770 926160 645780 473850 622060 687730 628660 792380 774250 770260 897630 897140 930070 942110 1054500 851820 847090 1024000 881950 880750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 881540000 16235 1022;3868 15389 30874;30875;30876 24740;24741;24742 24741 3 9606 Homo sapiens 0.038371453345462214 LIEDFLAR Unmodified 975.53893 0.53893149 839 A0A087WWM0;O43617-2;O43617;A6NKE1 TRAPPC3 Trafficking protein particle complex subunit 3 yes no 0 0 0 6.5 0.5 1 1 62.758 62.8 2 0.0010192 19385 20230619_1886_Aki_TMTPro18x_K_F6 150.84 117.72 384580 355200 380590 439650 353880 445940 386610 407340 417590 477290 436030 448710 540930 432220 448080 562760 514200 529920 355860 325750 386940 437060 371010 449470 389110 420690 424920 477690 451160 456370 544190 453430 461550 561240 491450 503610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91243000 16236 839 15390 30877;30878 24743 24743 1 9606 Homo sapiens 0.05018357931567152 LIEDKPR Unmodified 869.49707 0.49706667 1567 A0A590UJK4;A0A590UK01;A0A590UJP7;Q59GY3;A8K588;A0A590UK80;Q13247-3;Q13247;V9HVZ0 SRSF6;HEL-S-91 Serine/arginine-rich splicing factor 6 yes no 0 0 1 4.5 0.5 1 1 39.839 39.905 3 0.0090291 9486 20230619_1885_Aki_TMTPro18x_K_F5 100.39 32.078 308740 208370 273460 324730 381510 396550 352470 391220 490290 330840 376560 354200 389380 291600 310220 302020 398970 316360 284900 191830 282640 319110 387080 395280 361240 398260 486660 338590 391970 356440 393080 303600 321640 304230 380300 300630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206250000 16237 1567 15391 30879;30880 24744 24744 1 9606 Homo sapiens 0.0570980224304094 LIEEETAR Unmodified 959.49238 0.49237523 781 A0A024RDW4;Q9NWB6;B4E3J6;Q9NWB6-3;Q9NWB6-2 FLJ10154;ARGLU1 Arginine and glutamate-rich protein 1 yes no 0 0 0 1 0 1 41.596 41.596 2 0.0087328 10804 20230619_1880_Aki_TMTPro18x_K_F1 117.39 97.901 140830 102380 128250 141780 156540 169970 155000 168230 194580 157040 184680 158640 157400 141960 163040 162270 204920 181030 130030 94087 131830 140280 160390 169650 157610 171620 195430 159430 188580 160540 161890 148070 167990 163790 195490 171830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174860000 16238 781 15392 30881 24745 24745 1 9606 Homo sapiens 0.011008733096218748 LIEESQR Unmodified 873.4556 0.45559579 4506 Q9H307;A8K964;B4DTD4 PNN Pinin yes no 0 0 0 2.5 0.5 1 1 38.063 38.121 2 0.023296 8921 20230619_1881_Aki_TMTPro18x_K_F2 100.75 22.577 91262 49486 93842 95537 111620 121280 102660 111300 106770 97302 132290 133930 125580 113310 108780 77473 139250 141090 84230 45746 95384 92956 114260 120370 104230 113990 109500 100200 134230 133530 127630 115710 112410 82106 132950 133330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123190000 16239 4506 15393 30882;30883 24746 24746 1 9606 Homo sapiens 0.013806214837131847 LIEESSVDEVVVTNTVPHEVQK Unmodified 2450.254 0.25404902 527 B4DP31;A0A024R8M4;Q14558;Q14558-2 PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 1 yes no 0 0 0 3 0 1 57.893 57.923 3 2.5546E-14 17568 20230619_1882_Aki_TMTPro18x_K_F3 138.75 124.29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16240 527 15394 30884 24747 24747 1 9606 Homo sapiens 0.08693215725088521 LIEEVMIGEDK Oxidation (M) 1290.6377 0.63771883 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 1 0 3 0.816 1 1 1 58.075 58.091 3 0.00013181 17792 20230619_1881_Aki_TMTPro18x_K_F2 113.69 92.291 204910 185200 207070 219390 220570 237960 238130 226940 257650 255140 269030 261970 287600 244550 269770 290290 260830 287370 189610 169790 210450 219030 228440 239020 239700 233400 261880 256580 276290 265130 292050 255260 274270 290770 249830 272880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 542640000 16241 3756 15395 30885;30886;30887 24748;24749 24748 2427 2 9606 Homo sapiens 0.004025483236318905 LIEEVMIGEDK Unmodified 1274.6428 0.64280421 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 2 0.816 1 1 1 62.563 62.568 3 0.00044725 19764 20230619_1881_Aki_TMTPro18x_K_F2 96.229 59.945 116900 100180 110460 109410 89953 123110 106650 114720 125430 127920 127140 119840 140370 121620 126560 157730 142360 133060 108080 91791 112450 109970 95736 123230 107220 118100 126830 128340 130900 122190 142220 127270 129980 156460 136000 126670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136940000 16242 3756 15395 30888;30889;30890 24750;24751 24750 2 9606 Homo sapiens 0.01646852186263459 LIEGLSHEVIVSAACGR Unmodified 1809.9407 0.94071757 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 5.33 3.09 1 1 1 59.738 59.765 3 5.565E-134 17715 20230619_1888_Aki_TMTPro18x_K_F8 325.77 299.65 522510 448940 493530 503070 429200 526040 505720 509410 517290 594420 538100 528340 642520 532250 534730 654690 630350 702830 483080 411440 502880 504100 453360 529840 506080 523820 527770 594080 555620 539620 647300 555660 551600 658220 602690 666770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 690750000 16243 617 15396 30891;30892;30893 24752;24753;24754 24754 3 9606 Homo sapiens 0.0681448371190072 LIEHPSSSHQMLSEIR Oxidation (M) 1878.9258 0.92579578 2988 F8W108;F8WCU9;Q68CP9-3;Q68CP9;A0A8V8TP93 ARID2 AT-rich interactive domain-containing protein 2 yes no 0 1 0 3 0 1 38.778 38.832 4 0.00066205 9083 20230619_1882_Aki_TMTPro18x_K_F3 83.729 45.775 42811 32987 34400 41007 39789 52063 42778 49591 48272 40839 51174 46662 55011 45909 43473 49941 51922 59217 39507 30274 35776 40890 41074 51720 43146 50573 48948 41933 52493 47127 55470 47613 44913 50620 49647 56119 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79249000 16244 2988 15397 30894 24755 24755 1768 1 9606 Homo sapiens 0.021489918438874156 LIEIHGK Unmodified 808.48069 0.48068833 1037;1668 A0A0G2JN29;Q15155;A0A0G2JP90;A0A7I2V4T6;A0A7I2V6B0;J3KN36;Q5JPE7-2;P69849;Q5JPE7;A0A7I2V3P4;A0A7I2V2Z5;Q5JPE7-3;Q1LZN2 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 2;Nodal modulator 3 no no 0 0 0 8 0 1 44.47 44.489 3 0.012203 11284 20230619_1888_Aki_TMTPro18x_K_F8 89.298 45.163 252760 178000 217920 248950 269140 299390 282850 288050 363340 284240 348000 371000 368960 302630 300260 403230 384460 381950 233250 163630 225250 246150 276100 298570 286830 294950 364670 290250 358750 370550 372650 319680 311750 402090 367020 363020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 262590000 16245 1037;1668 15398 30895 24756 24756 1 9606 Homo sapiens 0.06878721076941474 LIEILSEK Unmodified 943.559 0.55899823 1989 Q9P2E9;A7BI36;Q9P2E9-3;A1A5C5;A1A5C4;F8W7S5 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 7 0 1 62.661 62.697 3 0.0057598 19028 20230619_1887_Aki_TMTPro18x_K_F7 91.069 25.816 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16246 1989 15399 30896 24757 24757 1 9606 Homo sapiens 0.08496108871520391 LIELQAGK Unmodified 870.51747 0.51746776 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;A0A0S2Z4D8;A0A0S2Z4W7;K7EPW7;A0A7I2V2T6;A2VCQ4;A0A0S2Z4A0 PRKCSH Glucosidase 2 subunit beta yes no 0 0 0 8 0 1 53.054 53.129 2 0.011782 14902 20230619_1888_Aki_TMTPro18x_K_F8 91.069 10.839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16247 444 15400 30897 24758 24758 1 9606 Homo sapiens 0.0770297290284816 LIELQAGKK Unmodified 998.61243 0.61243078 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;A0A0S2Z4D8;A0A0S2Z4W7;K7EPW7;A0A7I2V2T6;A2VCQ4;A0A0S2Z4A0 PRKCSH Glucosidase 2 subunit beta yes no 0 0 1 2 0 1 48.89 48.955 3 0.0023625 13947 20230619_1881_Aki_TMTPro18x_K_F2 98.033 34.547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16248 444 15401 30898 24759 24759 1 9606 Homo sapiens 0.11306906374034043 LIEVDDER Unmodified 987.48729 0.48728985 1910 Q96DV6;A2A3R6;P62753;A2A3R7 RPS6 40S ribosomal protein S6 yes no 0 0 0 1 0 1 46.338 46.338 2 7.3729E-07 12822 20230619_1880_Aki_TMTPro18x_K_F1 205.13 146.93 308410 322790 386660 294360 424530 326930 427580 368370 309160 287330 280480 179600 267460 199210 362650 192240 208930 143250 286280 295130 386140 300600 436300 329700 427300 371350 320620 291400 288220 188160 277510 204650 357640 191180 200940 136820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 672300000 16249 1910 15402 30899 24760 24760 1 9606 Homo sapiens -0.006954305530030069 LIEVDDERK Unmodified 1115.5823 0.58225287 1910 Q96DV6;A2A3R6;P62753;A2A3R7 RPS6 40S ribosomal protein S6 yes no 0 0 1 3 1.41 1 1 1 1 1 44.229 44.284 3 0.00025887 11489 20230619_1882_Aki_TMTPro18x_K_F3 123.29 89.418 2506100 1690400 2095600 2598800 2328200 2609300 2543300 2485100 2840100 2788800 2777000 2669400 3554100 2577500 2033700 3998400 3694000 3085700 2311700 1555900 2169600 2548200 2407200 2633800 2560900 2556100 2875400 2799000 2883500 2715600 3529300 2737700 2197000 3937900 3514100 2942700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3426199999.9999995 16250 1910 15403 30900;30901;30902;30903;30904 24761;24762;24763 24762 3 9606 Homo sapiens 0.029085029181715072 LIFQMPQNK Unmodified 1117.5954 0.59540051 707;627 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;A0A0J9YXZ5;F2Z2E2;A2RRC9;Q86VI3;E9PDT6;B7Z7U6;F5H7S7;A0A024RAJ8;Q13576;B7Z881;Q59HA3;Q13576-3;Q13576-2 IQGAP1;hCG_1991735;IQGAP3;IQGAP2 Ras GTPase-activating-like protein IQGAP1;Ras GTPase-activating-like protein IQGAP3;Ras GTPase-activating-like protein IQGAP2 no no 0 0 0 5 0 1 59.103 59.157 3 0.024991 17527 20230619_1885_Aki_TMTPro18x_K_F5 60.91 38.762 29985 29486 31772 27263 30006 36913 35166 37951 38772 45010 38757 31979 45503 37194 36558 41438 37338 37608 27775 26968 32080 27880 31470 36628 35285 38851 39343 44708 40010 33249 45786 38437 37402 41350 35720 35760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20387000 16251 707;627 15404 30905 24764 24764 1 9606 Homo sapiens 0.04130662496595505 LIFTDGSR Unmodified 907.47633 0.47633123 1521 A0A3B3ITK7;P36871;B4DFP1;B7Z6C2;P36871-3;P36871-2;B4DDQ8 PGM1 Phosphoglucomutase-1 yes no 0 0 0 7 0 1 50.228 50.309 2 0.013441 13715 20230619_1887_Aki_TMTPro18x_K_F7 94.874 47.431 149360 109190 130140 130800 144940 160110 135040 149610 153710 155120 152570 161460 177220 150220 169080 202820 184560 179160 137870 100190 134010 130730 149190 159450 137390 153650 155600 156670 157760 163320 179730 158070 173120 201550 176400 170440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139680000 16252 1521 15405 30906 24765 24765 1 9606 Homo sapiens 0.018892118633857535 LIFYDLR Unmodified 938.52255 0.52255314 3911 Q15046;Q15046-2;H3BVA8 KARS Lysine--tRNA ligase yes no 0 0 0 1.5 0.5 1 1 61.73 61.735 2 0.016144 19367 20230619_1881_Aki_TMTPro18x_K_F2 110.34 62.431 480450 416670 458720 485410 442260 544660 510450 501360 522380 511620 487900 471700 493900 401560 531200 561700 516330 524380 444260 381990 467780 485410 462930 545200 511180 515480 530250 515290 502570 478490 505550 425090 538860 559700 494220 498430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 689270000 16253 3911 15406 30907;30908 24766;24767 24767 2 9606 Homo sapiens 0.05083276765469691 LIGDAAK Unmodified 686.39629 0.39629 3430;3429;1031;2926 P11142;V9HW22;E9PKE3;Q53GZ6;B3KTV0;E9PNE6;P11142-2;Q53HF2;B4DTX2;E9PLF4;P54652;A0A024R6B5;E9PQK7;E9PQQ4;A0A384MDT7;E9PPY6;E9PN25;E9PI65;B3KUS2;P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4DNX1;V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7;E9PK54 HSPA8;HEL-S-72p;HSPA2;HSPA1A;HSPA1B;HEL-S-103;HEL-S-89n;HSPA5 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;78 kDa glucose-regulated protein no no 0 0 0 5 1.41 1 1 1 1 1 45.436 45.51 2 0.017824 11834 20230619_1885_Aki_TMTPro18x_K_F5 108.09 26.128 3726400 1838700 4201300 4231800 5371200 5756300 4967800 4854800 5144900 3819800 5367700 5099500 5151300 4028800 4705100 2605700 5620600 4530600 3440800 1705800 4246100 4091800 5472300 5679700 5038100 4994600 5234400 3957100 5485500 5080300 5240700 4119700 4830200 2756900 5361300 4286800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7638699999.999999 16254 3430;1031;3429;2926 15407 30909;30910;30911;30912;30913 24768;24769;24770 24768 3 9606 Homo sapiens 0.04054770260177065 LIGEYGLR Unmodified 919.51272 0.51271674 299 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 RPS9 40S ribosomal protein S9 yes no 0 0 0 7 0.816 1 1 1 52.037 52.113 2 0.0098922 14576 20230619_1887_Aki_TMTPro18x_K_F7 100.39 69.971 367270 311440 350760 360180 389920 435570 432730 422970 481500 404750 420610 425170 443400 351680 380390 505550 525820 499570 339560 285520 358380 360830 403140 434460 435260 432460 485160 410750 435410 428460 448870 373440 396620 504800 501510 474650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6522399999.999999 16255 299 15408 30914;30915;30916 24771 24771 1 9606 Homo sapiens 0.04974088760104678 LIGNLCYK Unmodified 979.51609 0.51608756 4650 Q9UBB4;A0A1W2PQD2;Q9UBB4-2;Q7Z524;B1AHE4 ATXN10 Ataxin-10 yes no 0 0 0 3.5 0.5 1 1 55.333 55.36 3 0.0094821 16510 20230619_1882_Aki_TMTPro18x_K_F3 76.899 39.177 91077 68817 80613 78761 78963 87795 88904 87778 102230 71457 69613 65867 70668 63880 83341 80572 80032 67954 84096 63112 82724 78880 82461 88102 89466 89240 102010 72982 73021 67109 72738 66811 84321 80012 76523 64721 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34965000 16256 4650 15409 30917;30918 24772;24773 24772 2 9606 Homo sapiens 0.02551015542451296 LIGPNCPGVINPGECK Unmodified 1723.8386 0.83856068 2059 Q6IAL5;B2R8A1;A8K4W7;P53597;A0A494C0D1;B7Z438 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes no 0 0 0 1 0 1 54.583 54.583 3 4.0622E-08 16248 20230619_1880_Aki_TMTPro18x_K_F1 127.71 103.42 32397 25564 36575 33376 35434 36915 43135 44092 46273 42267 37849 37651 45495 38893 42601 47495 40489 47870 29982 23471 36773 33129 37067 37223 43144 44482 46635 42676 39573 38491 46054 40542 43284 47596 38811 45436 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105580000 16257 2059 15410 30919 24774 24774 1 9606 Homo sapiens 0.005594943686674014 LIGTNCIIYPVNSK Unmodified 1590.844 0.84396364 4481 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 3.5 0.5 1 1 60.148 60.163 3 3.726E-09 18375 20230619_1883_Aki_TMTPro18x_K_F4 164.22 148.8 104680 98398 104770 102680 102200 125430 116390 100040 122770 129900 114160 102790 116090 108700 119290 140310 147580 138160 96890 90094 106390 103680 106830 124550 116710 104780 124450 128900 117580 105840 118690 113590 122920 140300 140870 131280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 83037000 16258 4481 15411 30920;30921 24775;24776 24775 2 9606 Homo sapiens 0.07217541222757973 LIGWGQIR Unmodified 941.54469 0.54468557 3571 P41091;Q2VIR3 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 5 0 1 56.904 56.965 2 0.00061364 16624 20230619_1885_Aki_TMTPro18x_K_F5 182.31 124.14 252250 251710 231310 197580 252410 370460 272980 287250 392230 22474 14390 23434 25484 21810 101460 32392 29168 24795 233410 229940 236960 206530 262070 359470 277460 291960 376530 37712 33256 23923 29413 23096 97456 32178 28576 23647 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74453000 16259 3571 15412 30922 24777 24777 1 9606 Homo sapiens 0.0715750123390535 LIHLEIK Unmodified 864.54329 0.54328858 1774;3554 A0A8I5KVF6;A0A8I5QJL9;A0A8I5QJ96;A0A8I5KYS7;B4DFY5;A4QPA9;A0A8I5KYB4;Q02750-2;Q02750;A0A8I5KRX5;A0A8I5QJC1;A0A8I5QJP8;P36507;Q7Z370 MAP2K1;MAP2K2;DKFZp686L02273 Dual specificity mitogen-activated protein kinase kinase 1;Dual specificity mitogen-activated protein kinase kinase 2 no no 0 0 0 1 0 1 51.902 51.902 3 0.0099338 15159 20230619_1880_Aki_TMTPro18x_K_F1 92.925 25.167 80939 70697 47125 66104 42189 70846 66548 66763 115600 74133 89196 150790 152290 150080 66827 231650 226430 309940 74615 64690 50761 67222 45247 71171 67144 68738 113810 76995 95811 149700 149750 159140 79204 235240 215690 293250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66364000 16260 1774;3554 15413 30923 24778 24778 1 9606 Homo sapiens 0.10559867145127555 LIHPDEDISLEER Unmodified 1564.7733 0.77330111 3148 J3QRS9;Q59G94;X6R4W8;O43670-2;O43670;O43670-4;O43670-3;Q8N395;J3KS31;B4DQT7 ZNF207;DKFZp761N202 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes no 0 0 0 1.5 0.5 1 1 48.501 48.534 3 1.6516E-28 13739 20230619_1880_Aki_TMTPro18x_K_F1 217.91 193.61 190250 133430 167280 185280 185160 204510 217640 200130 210040 221610 223440 194730 214780 178000 201860 222710 205350 212660 175580 122650 172240 183050 191770 205200 217290 205360 215010 221970 228070 198450 218820 186570 205810 222470 196500 202060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 389520000 16261 3148 15414 30924;30925 24779;24780 24779 2 9606 Homo sapiens 0.013505394388175773 LIHTLDDR Unmodified 981.52434 0.52434406 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1 SRRT Serrate RNA effector molecule homolog yes no 0 0 0 3.5 0.5 1 1 41.32 41.371 3 0.0001724 10119 20230619_1883_Aki_TMTPro18x_K_F4 160.11 56.188 252310 179540 224620 263420 276980 279160 294740 273960 311360 267740 320350 292620 308130 246530 254410 327120 318620 292910 232900 165130 231500 259210 283850 280950 296590 280170 316420 271740 327480 294630 312250 260070 263590 325310 304060 278670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 572350000 16262 4464 15415 30926;30927 24781;24782 24782 2 9606 Homo sapiens 0.03284285783411178 LIIAGTSAYAR Unmodified 1134.6397 0.63970816 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;P34897-2;Q5HYG8;B4DW25;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4;H0YIZ0;G3V2Y4;G3V5L0 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 3.5 0.5 1 1 51.429 51.478 2 3.6184E-23 14635 20230619_1883_Aki_TMTPro18x_K_F4 258.95 217.45 384440 316940 330200 332700 377100 436700 426150 417790 442530 387200 383730 417030 396620 355710 507840 427550 443080 469980 355080 290340 340730 336250 389540 433310 427250 427220 447480 393930 397610 419900 409780 372720 510430 431130 424750 445840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 624120000 16263 657 15416 30928;30929 24783 24783 1 9606 Homo sapiens 0.07777389914417654 LIIDDLSMDK Unmodified 1161.5951 0.59512574 4768 yes no 0 0 0 4 0 1 50.28 50.311 2 0.013761 14134 20230619_1883_Aki_TMTPro18x_K_F4 72.492 0 + 148240 112820 140600 144090 109360 135840 147110 130120 23511 170400 181070 209440 231920 180650 167180 238880 234020 187950 136960 103580 143030 142850 116900 137830 142530 134510 37812 170880 180810 209870 231880 190320 175200 236070 222950 179220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159190000 16264 4768 15417 30930 24784 24784 1 9606 Homo sapiens 0.02079197986086001 LIILASGGPQALVNIMR Unmodified 1765.0284 0.028410363 209 A0A2R8Y804;B4DSW9;A0A2R8Y543;A0A2R8Y5C3;B4DL06;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y7Z0;B5BU28;A0A024R2Q3;A0A2R8Y5A3;P35222 CTNNB1 Catenin beta-1 yes no 0 0 0 8 0 1 65.565 65.584 3 4.4868E-05 20193 20230619_1888_Aki_TMTPro18x_K_F8 94.487 77.462 7554.9 6466.9 9402 8208.5 7362 10120 8518 8446.8 11991 8974.7 9975.9 8295.8 9873.2 9406.9 10970 10714 10784 10471 7001.9 5933.9 9361.3 8173.2 7856.5 10044 8631.8 8758.4 11927 9032.9 10317 8501.1 10140 9732.4 11124 10734 10318 9949.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11590000 16265 209 15418 30931 24785 24785 1 9606 Homo sapiens 0.17649729373351875 LIINSLYK Unmodified 962.58007 0.58006802 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;A0A7P0TBC2;Q96GW1;A0A7P0T885;A0A7P0T8R3;A0A7P0Z405;B4DQX3;F8W026 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 4.5 0.5 1 1 59.923 59.951 2 4.7566E-05 17869 20230619_1885_Aki_TMTPro18x_K_F5 187.8 122.47 319460 236360 237560 263530 310960 402640 367700 379930 448460 130350 103960 85849 101530 80819 206420 76523 85088 61749 294590 216730 249540 265780 319490 395840 369550 382840 437520 144340 122900 89178 108700 83356 200630 76591 82423 58892 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 345140000 16266 3452 15419 30932;30933 24786 24786 1 9606 Homo sapiens 0.09728118971031563 LIIPPALGYGK Unmodified 1140.6907 0.6906811 900 H7C1Z9;H9XW20;A0A090N7V8;Q9NWM8 FKBP14 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase FKBP14 yes no 0 0 0 5 0 1 62.37 62.417 3 0.00011611 18992 20230619_1885_Aki_TMTPro18x_K_F5 116.3 91.088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16267 900 15420 30934 24787 24787 1 9606 Homo sapiens 0.12596338959269815 LIISNNK Unmodified 800.4756 0.47560295 1188 A0A140VJN3;Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes no 0 0 0 2 0 1 47.126 47.202 3 0.0054271 13150 20230619_1881_Aki_TMTPro18x_K_F2 104.11 70.753 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16268 1188 15421 30935 24788 24788 1 9606 Homo sapiens 0.06738417214330639 LIITEETAK Unmodified 1016.5754 0.57537657 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 5 0.816 1 1 1 52.246 52.304 2 3.5822E-05 14728 20230619_1885_Aki_TMTPro18x_K_F5 186.3 94.4 465820 360300 395300 439350 410640 464280 468110 458610 539050 546890 599490 601810 638660 534110 519380 659990 607250 635460 430040 330600 407940 437550 427190 467480 470890 471340 547600 549640 613830 606330 644860 559800 535880 659430 580360 603720 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 460590000 16269 4414 15422 30936;30937;30938 24789;24790;24791 24790 3 9606 Homo sapiens 0.06775190037626544 LIITQVR Unmodified 841.53854 0.53853756 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJA1;A0A804HKK7;A0A804HKX6 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 4 0 1 48.944 48.982 2 0.0029395 13486 20230619_1883_Aki_TMTPro18x_K_F4 158.38 45.296 295210 260620 260370 287650 267740 311280 309870 311630 351480 288370 272080 276480 285720 233440 344750 299730 298580 291910 272840 238800 267700 288680 278890 313020 311240 317710 352430 292400 283710 279790 293910 245780 346720 299860 286080 277370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 500250000 16270 1723 15423 30939 24792 24792 1 9606 Homo sapiens 0.1114298300237806 LIIVEGCQR Unmodified 1086.5856 0.5855641 3387;959;3651 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z1Q9;B7Z3F8;B3KV59;B3KSY7;B3KNQ8;B4E0R9;P05023;P05023-4;P05023-3;B7Z3V1;B3KRI1;B2RAQ4;P50993;B1AKY9;A0A0S2Z3W6;B7Z1N5;H0Y7C1;B3KX35;B3KW93;B4DIQ8;Q13733;Q58I23;P54707;P54707-2 ATP1A3;ATP1A1;ATP1A2;ATP1A4;ATP12A Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Potassium-transporting ATPase alpha chain 2 no no 0 0 0 6.5 0.5 1 1 49.445 49.526 2 2.4539E-05 13386 20230619_1887_Aki_TMTPro18x_K_F7 167.9 96.559 217480 193910 214550 235200 239190 273640 262020 262160 317310 267060 276900 262080 272010 227000 285840 311320 303610 298030 201190 177820 218720 234640 247260 273510 264530 268710 318380 269590 285740 265260 278450 239790 291540 310660 290280 283230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 615410000 16271 959;3387;3651 15424 30940;30941 24793;24794 24794 2 9606 Homo sapiens 0.045734744911896996 LIIWDSYTTNK Unmodified 1352.6976 0.69761697 3730;1179;4542 Q6FHM2;P62879;C9JIS1;C9JXA5;C9JZN1;E7EP32;Q9HAV0;A0A7I2S2S9;H7C5J5;A0A6Q8PFW8;A0A6Q8PFE0;A0A6Q8PFV8;A0A6Q8PG88;B2R6K4;A0A140VJJ8;P62873;F6X3N5;A0A2L0WW42;P62873-2;A0A994J3T6;F6UT28;A0A994J6X8;B1AKQ8 GNB2;GNB4;GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 0 1.5 0.5 1 1 62.233 62.238 3 3.4658E-17 19598 20230619_1881_Aki_TMTPro18x_K_F2 226.2 194.78 516210 445890 513380 554850 394590 485280 499640 520550 546290 620830 609900 654390 658670 608280 666030 745230 636990 743560 477470 409050 520240 550540 422480 496750 499500 532160 556810 622900 625370 661250 671290 635990 676030 746380 610480 705860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1707699999.9999998 16272 3730;4542;1179 15425 30942;30943 24795;24796 24796 2 9606 Homo sapiens 0.03537607049179314 LILCDECNK Unmodified 1163.5315 0.53147962 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 0 4 0 1 51.194 51.222 2 0.094536 14565 20230619_1883_Aki_TMTPro18x_K_F4 68.224 30.879 64344 48190 50187 60591 49325 63271 56269 55500 65650 72992 70298 76393 88534 69797 63085 90343 82681 83628 59357 44237 52216 60187 51609 63580 56633 57718 66599 72934 72719 77176 88547 73315 65828 89998 78926 79498 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13079000 16273 4666 15426 30944 24797 24797 1 9606 Homo sapiens -0.043744857226784006 LILDFLNSK Unmodified 1061.6121 0.61209643 3340 O94967-2;O94967;O94967-3;O94967-4;E9PKZ6;E9PR96 WDR47 WD repeat-containing protein 47 yes no 0 0 0 3.5 0.5 1 1 65.013 65.034 2 0.001039 20553 20230619_1882_Aki_TMTPro18x_K_F3 133.13 89.326 29127 22880 28923 37822 23205 34534 26763 31729 32225 37830 33416 39974 41769 36829 34708 43975 47856 51377 26925 21067 29372 36888 24731 35063 26976 32774 32612 37961 34636 40358 42054 38480 36194 44458 45685 48707 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16559000 16274 3340 15427 30945;30946 24798 24798 1 9606 Homo sapiens 0.08375486654176711 LILDLSMK Oxidation (M) 947.53615 0.5361543 3636 P52788;B4DE40;P52788-2 SMS Spermine synthase yes no 0 1 0 1 0 1 61.395 61.395 2 0.076628 19030 20230619_1880_Aki_TMTPro18x_K_F1 87.181 55.892 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16275 3636 15428 30947 24799 24799 2328 1 9606 Homo sapiens 0.06028766482415904 LILDSAR Unmodified 786.45995 0.45995289 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8;B4DVU1 HEL107;TKT Transketolase yes no 0 0 0 6 0.816 1 1 1 46.649 46.732 2 0.022597 12103 20230619_1887_Aki_TMTPro18x_K_F7 101.69 46.087 339310 264460 295490 321910 300070 349580 342690 335710 678130 331880 323260 301940 332390 284000 301010 387420 385190 286920 313320 242650 304070 320750 313420 351050 353010 343840 656520 335580 348450 307520 337770 298870 311730 381820 367050 273940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 406080000 16276 3523 15429 30948;30949;30950 24800 24800 1 9606 Homo sapiens 0.05818130697275592 LILDVEK Unmodified 828.49567 0.49566969 2013 Q9HCJ6;A8K288;Q8NDE0 VAT1L;DKFZp547P162 Synaptic vesicle membrane protein VAT-1 homolog-like yes no 0 0 0 5.5 0.5 1 1 57.396 57.462 2 0.016498 17083 20230619_1886_Aki_TMTPro18x_K_F6 114.6 44.335 65130 62242 72263 74084 44921 51994 94640 107350 120250 89809 76277 76658 100170 76319 73276 117150 88541 90132 60342 57055 72447 73641 50175 55512 93316 105320 119210 91302 81353 78500 100180 80908 76073 115420 84579 85888 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57864000 16277 2013 15430 30951;30952 24801 24801 1 9606 Homo sapiens 0.07456168154283205 LILEQMQK Unmodified 1001.558 0.55795237 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;H0YGI8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 1 0 1 56.449 56.449 2 0.0013465 17007 20230619_1880_Aki_TMTPro18x_K_F1 155.75 76.447 264040 225390 247280 259660 216420 264280 255630 251810 293260 309320 285130 272700 302950 263200 305790 316690 281830 292320 244090 206620 252220 259540 228570 266610 256710 259670 296480 308420 293690 278200 308760 274630 309640 316030 269960 277860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 550740000 16278 2088 15431 30953 24802 24802 1 9606 Homo sapiens 0.057235712309761766 LILEQMQK Oxidation (M) 1017.5529 0.55286699 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;H0YGI8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 1 0 7 0 1 49.245 49.329 3 0.0011001 13294 20230619_1887_Aki_TMTPro18x_K_F7 114.6 93.096 229690 197200 222430 263490 255370 239170 239540 242940 281600 269690 303940 290890 276020 236830 259710 281140 296870 260730 212400 181040 227220 260250 261950 243890 243820 248740 285360 271760 309460 292550 281840 248350 266530 280640 283430 247990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 591600000 16279 2088 15431 30954 24803 24803 1317 1 9606 Homo sapiens 0.044792673683673456 LILEVHQFSR Unmodified 1240.6928 0.69280637 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 51.669 51.691 3 4.4877E-14 15040 20230619_1880_Aki_TMTPro18x_K_F1 224.75 165.77 76136 59282 67531 66804 66962 73472 81208 85286 84025 83062 82233 83916 84829 66426 81703 83574 88242 92169 70314 54353 69309 66982 69986 74072 81158 86223 85382 84055 84596 84552 86312 70049 83507 84182 84393 87437 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 189130000 16280 2337;3778;3779 15432 30955;30956 24804;24805 24804 2 9606 Homo sapiens 0.08208767697078656 LILEYVK Unmodified 876.53206 0.5320552 2215 B2R514;E7EM64;Q7L5N1 COPS6 COP9 signalosome complex subunit 6 yes no 0 0 0 1.5 0.5 1 1 61.577 61.581 2 0.017824 19139 20230619_1880_Aki_TMTPro18x_K_F1 108.09 24.472 89663 73376 81750 94328 83054 111910 99192 98011 112080 51064 54140 42397 49644 38747 66689 47472 51349 37800 82849 67349 83831 93738 86786 111430 99432 99848 110930 53979 58046 43396 51609 40560 66556 47095 49185 36055 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65784000 16281 2215 15433 30957;30958 24806 24806 1 9606 Homo sapiens 0.08885045050999452 LILGLMMPPAHYDAK Oxidation (M) 1684.8681 0.8680699 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 1 0 3.33 0.471 2 1 60.616 60.632 3 0.00016152 19003 20230619_1882_Aki_TMTPro18x_K_F3 101.3 96.413 121520 106170 114890 139330 134210 134170 125970 130660 137630 135550 148990 140000 141220 131910 148280 144720 181340 167270 112370 97447 117670 137870 137560 136020 127900 133880 140030 136870 151960 141690 144830 137000 152450 146500 173090 158680 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 51780000 16282 1062;1064 15434 30959;30960;30961 24807;24808;24809;24810 24808 628;629 4 9606 Homo sapiens 0.053030583848112656 LILGLMMPPAHYDAK Unmodified 1668.8732 0.87315527 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 0 4 0.816 1 1 1 62.525 62.552 3 1.1861E-10 19424 20230619_1883_Aki_TMTPro18x_K_F4 155.28 126.27 134170 119620 136310 131870 118190 146020 134070 129570 133290 176360 177690 181420 183610 160440 181730 194830 187010 198700 124150 109600 138000 132410 124720 146220 134330 134770 137790 175810 180550 183210 187130 168000 185190 195420 178960 188640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 373290000 16283 1062;1064 15434 30962;30963;30964 24811 24811 1 9606 Homo sapiens 0.06547362247420097 LILIESR Unmodified 842.52255 0.52255314 3712 P62277 RPS13 40S ribosomal protein S13 yes yes 0 0 0 7.5 0.5 1 1 53.892 53.961 2 0.048562 15283 20230619_1887_Aki_TMTPro18x_K_F7 86.872 49.852 885830 719090 733370 853570 790440 878220 853590 863310 985380 877750 807250 750260 864340 727220 806890 964410 868710 823840 817900 659520 759230 851300 818790 885950 861030 883390 989350 882690 838810 767150 877710 763420 825790 957030 830260 784140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12773000000 16284 3712 15435 30965;30966 24812;24813 24812 2 9606 Homo sapiens 0.09499276765473041 LILLITQVTASEK Unmodified 1427.8599 0.85993128 3916 Q15061;Q8TB67 WDR43 WD repeat-containing protein 43 yes no 0 0 0 4.5 0.5 1 1 65.85 65.878 3 1.9664E-11 20520 20230619_1885_Aki_TMTPro18x_K_F5 188.91 173.47 53108 37323 47980 52860 42623 45088 45436 44776 64291 53425 52029 48830 59894 47015 55336 59284 49675 65003 49025 34315 49104 51991 44806 46176 46239 46019 63924 53425 54280 49740 60630 49244 56065 59682 47689 61624 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26693000 16285 3916 15436 30967;30968 24814;24815 24815 2 9606 Homo sapiens 0.16311570731340908 LILPHVDIQLK Unmodified 1287.7915 0.79145778 3600 Q53GL5;P48735;P48735-2 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 0 0 3 0 1 61.452 61.481 3 0.017147 19008 20230619_1882_Aki_TMTPro18x_K_F3 61.213 43.481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16286 3600 15437 30969 24816 24816 1 9606 Homo sapiens 0.1590737094211363 LILPVGPAGGNQMLEQYDK Unmodified 2042.0507 0.050661947 1398 B7Z972;A0A384MDK7;A0A3F2YNX8;P22061;P22061-2;F6S8N6 PCMT1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 8 0 1 62.913 62.938 3 4.0339E-07 19092 20230619_1888_Aki_TMTPro18x_K_F8 100.41 90.661 30751 23386 25989 27632 22752 24385 28916 25968 28790 35474 39820 35833 45316 32848 40938 46497 44912 44182 28386 21453 26757 27523 24054 24952 28804 26689 29799 35340 40553 36296 45826 34729 41955 46356 42928 41991 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 461810000 16287 1398 15438 30970 24817 24817 1 9606 Homo sapiens 0.07131864260441034 LILSELR Unmodified 842.52255 0.52255314 4766 yes no 0 0 0 7.33 0.471 2 1 54.789 54.854 2 0.010707 15723 20230619_1887_Aki_TMTPro18x_K_F7 117.62 0 + 169790 117600 148200 173630 150870 184650 164760 171990 199930 195240 176450 186540 213750 143660 167890 233600 207800 200740 156690 108180 152550 170790 157120 185490 166430 177190 200860 195800 183810 188360 214590 154500 174100 231240 198390 191040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1263600000 16288 4766 15439 30971;30972;30973 24818 24818 1 9606 Homo sapiens 0.09499276765473041 LILTEASK Unmodified 873.51713 0.51713341 2566 B4DPK2;Q9NVH1-3;Q9NVH1;B4DGD5;B3KTC6 DNAJC11 DnaJ homolog subfamily C member 11 yes no 0 0 0 7.5 0.5 1 1 52.447 52.518 2 0.00024066 14630 20230619_1888_Aki_TMTPro18x_K_F8 131.06 42.12 168240 160910 178100 166670 238840 284750 217080 230230 307000 122520 125220 108950 109260 92649 159090 107900 122850 84334 155800 147310 180990 169460 243000 277680 222780 235940 299840 129590 136310 110800 114450 96888 158600 107060 117630 80492 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73807000 16289 2566 15440 30974;30975 24819;24820 24820 2 9606 Homo sapiens 0.0753155318300287 LIMAMQTLIPIDEAK Oxidation (M) 1701.9045 0.90451498 2382 Q8TEX9-2;Q8TEX9;B3KQ33;Q59FI4;B3KPS9;B3KT38;B3KTB3;D3DS63;H0YN14 IPO4 Importin-4 yes no 0 1 0 2 0 1 64.645 64.653 3 0.00062066 20692 20230619_1881_Aki_TMTPro18x_K_F2 78.505 62.572 8123.5 6590.9 8862.1 9868.7 8360.9 8409.6 8155.7 10326 10622 10305 9980.3 13316 11077 11153 11652 10746 9625.9 11561 7516.9 6060.2 8937 9676 8714.3 8657.3 8320.7 10414 10660 10504 10344 13293 11307 11545 11723 10857 9243 10965 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14082000 16290 2382 15441 30976 24821 24821 1468 1 9606 Homo sapiens 0.08163890490868653 LIMAMQTLIPIDEAK Unmodified 1685.9096 0.90960036 2382 Q8TEX9-2;Q8TEX9;B3KQ33;Q59FI4;B3KPS9;B3KT38;B3KTB3;D3DS63;H0YN14 IPO4 Importin-4 yes no 0 0 0 2.5 0.5 1 1 65.601 65.621 3 1.1688E-07 21043 20230619_1881_Aki_TMTPro18x_K_F2 127.76 109.03 11945 10297 10704 12988 9019.3 11415 12841 11761 14550 14337 11854 13508 19531 12843 15125 16820 14278 14816 11039 9447.4 10968 12872 9619.3 11668 12775 12067 14631 14328 12636 13726 19453 13496 15419 16722 13673 14092 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32303000 16291 2382 15441 30977;30978 24822 24822 1 9606 Homo sapiens 0.09408194353477484 LIMGIGHR Oxidation (M) 911.50111 0.50110619 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 1 0 3 0.816 1 1 1 38.538 38.591 3 0.00010943 9005 20230619_1882_Aki_TMTPro18x_K_F3 162.51 90.494 125780 101150 117820 120690 115010 123370 125990 111200 134130 116460 122890 98219 119040 91960 122970 105800 116800 99155 116230 92779 120310 120330 119960 124310 126650 114640 135690 116910 126310 100400 121730 95854 124530 105790 111690 94313 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 209280000 16292 161 15442 30979;30980;30981 24823;24824 24823 95 2 9606 Homo sapiens 0.04181568465116925 LIMGIGHR Unmodified 895.50619 0.50619157 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 4.5 0.5 1 1 43.776 43.838 3 2.6708E-05 11185 20230619_1883_Aki_TMTPro18x_K_F4 181.2 81.687 268870 230330 265080 242990 170630 227140 226030 218960 235970 231570 208400 168600 221110 158610 225090 210760 200960 161310 248660 210980 268050 244340 186500 230730 225170 224660 238790 231450 215470 173800 225230 166830 227390 208260 192230 153880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 163180000 16293 161 15442 30982;30983 24825;24826;24827 24826 3 9606 Homo sapiens 0.05425872327725756 LIMVLAGASEFDPQYNK Unmodified 1894.9499 0.94988527 1136 B3KQF0;A0A0S2Z5M1;Q9UGP8;B3KNE7 SEC63 Translocation protein SEC63 homolog yes no 0 0 0 2 0 1 65.129 65.137 3 0.00018946 20854 20230619_1881_Aki_TMTPro18x_K_F2 85.45 74.983 11107 8114.6 8316.4 8824.9 11815 12052 10595 10019 12752 9613.2 12495 11206 12575 9640.4 12524 11926 12728 10847 10243 7439.5 8734.4 8897.7 11965 11901 10817 10365 12847 9794 12828 11262 12821 10118 12743 11891 12163 10321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8476600 16294 1136 15443 30984 24828 24828 1 9606 Homo sapiens 0.03820832277597219 LINANMMVLGHEPR Oxidation (M) 1609.8069 0.80686662 1251 A0A140VKF2;O00487;Q53TH1;Q59G89 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes no 0 1 0 1 0 1 49.757 49.757 3 0.00058524 14255 20230619_1880_Aki_TMTPro18x_K_F1 85.006 73.794 29426 44826 27987 26840 28210 36303 35386 32250 37429 33672 27761 25250 30191 28130 38505 33562 38115 32185 27344 40843 28558 28779 29516 35951 35310 33258 37635 33716 29055 26125 31157 29207 38956 33580 36430 30606 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39465000 16295 1251 15444 30985 24829 24829 792;793 1 9606 Homo sapiens 0.026355464053267497 LINANMMVLGHEPR Unmodified 1593.812 0.811952 1251 A0A140VKF2;O00487;Q53TH1;Q59G89 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes no 0 0 0 2 0 1 53.898 53.926 3 6.2249E-37 16143 20230619_1881_Aki_TMTPro18x_K_F2 220.99 196.05 51408 39624 40826 41460 44795 50397 51502 53694 56333 43957 48035 47952 53434 42376 40821 56784 57587 48287 47438 36307 42421 41868 46430 50368 51686 54349 56747 45080 49899 48351 53766 44654 42741 56310 54872 45987 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54483000 16296 1251 15444 30986 24830 24830 1 9606 Homo sapiens 0.03879850267958318 LINANMMVLGHEPR 2 Oxidation (M) 1625.8018 0.80178124 1251 A0A140VKF2;O00487;Q53TH1;Q59G89 PSMD14 26S proteasome non-ATPase regulatory subunit 14 yes no 0 2 0 8 0 1 43.75 43.76 3 0.016658 11011 20230619_1888_Aki_TMTPro18x_K_F8 55.213 50.745 26438 22332 29768 24564 32904 31907 29676 26951 38018 28390 33224 26790 30863 25660 37826 30942 31870 28409 24477 20465 29970 24738 33812 31614 30366 27916 38036 28597 34182 27263 31896 26787 37973 30893 30526 27022 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13532000 16297 1251 15444 30987 24831 24831 792;793 1 9606 Homo sapiens 0.01391242542740656 LINEIEEMGGMAK Unmodified 1433.6894 0.68943683 752 A0A0S2Z4X4;T1WHH0;A0A2S1PH13;A0A2S1PH16;B2R6K1;A0A2S1PH34;A0A2S1PH23;A0A2S1PH20;A0A2S1PH09;A0A024RD82;P22033;A0A2S1PH31;A0A2S1PH46 MUT Methylmalonyl-CoA mutase, mitochondrial yes no 0 0 0 5 0 1 63.863 63.909 3 0.00011307 19712 20230619_1885_Aki_TMTPro18x_K_F5 98.592 75.675 34430 30242 37074 37248 27319 42164 39578 37051 46186 38782 44548 48260 45162 45080 42042 49375 46446 59397 31872 27739 37314 37107 29570 42115 39403 38267 46571 39415 45837 48459 45975 46813 43095 50086 44486 56262 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95558000 16298 752 15445 30988 24832 24832 1 9606 Homo sapiens -0.010060312541099847 LINNAIK Unmodified 784.48069 0.48068833 1042;3360 O94973-2;O94973;B7Z5S9;A0A0G2JS82;O94973-3;A0A8I5KPP9;A0A0G2JQM1;B3KMI7;A0A0G2JRF9;A0A0G2JQA4;E9PPY8;E9PQP4;A0A0G2JQT9;A0A0G2JS17;Q59FN8;A0A0G2JQF7;A0A0G2JRP9;A0A0G2JQV2;A0A0G2JQP3;O95782-2;O95782;B4DXJ6 AP2A2;AP2A1 AP-2 complex subunit alpha-2;AP-2 complex subunit alpha-1 no no 0 0 0 2 0 1 48.502 48.567 2 0.02381 13741 20230619_1881_Aki_TMTPro18x_K_F2 100.07 35.263 152920 130310 158180 150730 179520 182670 183300 186830 269580 178700 194000 169860 185010 141750 179120 207160 201620 162290 141470 119460 160510 151040 184900 182450 187200 190300 266430 180950 202020 172070 188790 150610 183630 204540 192420 154770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164820000 16299 1042;3360 15446 30989 24833 24833 1 9606 Homo sapiens 0.07982721076950838 LINQPLPDLK Unmodified 1149.6758 0.67575932 275;1599 A0A024R3Z1;A0A024R3Y8;P11137-4;A0A669KB77;P11137-3;P11137;A8K5Y1;A0A024R409;Q59FX9;P11137-2 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 0 1 0 1 58.895 58.895 3 0.012587 18041 20230619_1880_Aki_TMTPro18x_K_F1 66.92 40.803 67798 51652 56953 53158 34772 53277 57018 66280 75939 73483 72353 75294 70660 67290 75485 86774 81371 88093 62581 47324 58417 53625 38648 54147 56826 66968 76127 73922 74362 76097 72461 70676 77065 86924 77845 83633 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154220000 16300 275;1599 15447 30990 24834 24834 1 9606 Homo sapiens 0.10690847091268552 LINTQAIFAK Unmodified 1117.6495 0.64954457 439 A0A024R7D0;P49366;M0R0V2;P49366-3 DHPS Deoxyhypusine synthase yes no 0 0 0 5 0 1 60.919 60.969 3 0.00067604 18288 20230619_1885_Aki_TMTPro18x_K_F5 96.342 62.472 38649 27807 30372 33504 27179 34521 37360 32663 35573 31958 32825 26011 37013 26689 32154 36488 28814 31320 35648 25519 31521 33383 28801 34779 37014 33495 36220 32166 33949 26742 37372 28048 32624 36208 27619 29793 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98936000 16301 439 15448 30991 24835 24835 1 9606 Homo sapiens 0.09542577919773976 LIPDGCGVK Unmodified 957.49535 0.49535211 3513 X1WI28;X5D2T3;P27635;F8W7C6;X5D7P1 RPL10 60S ribosomal protein L10 yes no 0 0 0 7 0 1 50.407 50.488 2 0.002951 13800 20230619_1887_Aki_TMTPro18x_K_F7 101.64 73.47 271300 221870 219840 268780 260640 267810 295270 252330 335460 243660 221610 181330 291580 210420 256840 312930 282110 278170 250470 203530 228510 267520 268420 270610 296710 258780 334780 245100 235560 188280 293560 221720 263480 310670 269650 264590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 246460000 16302 3513 15449 30992 24836 24836 1 9606 Homo sapiens 0.014904251627854137 LIPDSIGK Unmodified 841.49092 0.49091866 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;D6RB09;H0Y9Y4;D6R9B6 RPS3A 40S ribosomal protein S3a yes no 0 0 0 6.2 2.64 1 2 2 54.568 54.62 2;3 0.0027232 15503 20230619_1888_Aki_TMTPro18x_K_F8 135.77 75.007 824280 678520 700330 729700 761430 854460 792500 798270 959280 961380 945010 901720 1094400 883560 811330 1180300 1069800 1008100 761270 621710 722810 734650 787580 853540 802500 823580 967720 961250 976150 918110 1098700 927740 846280 1170600 1020700 959550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4651800000 16303 3694 15450 30993;30994;30995;30996;30997 24837;24838;24839 24839 3 9606 Homo sapiens 0.06383284011531032 LIPHVQVFAR Unmodified 1178.6924 0.69241244 466 A0A024R7P3;A0A024R7N2;Q9HD20-2;Q9HD20;Q8NC73 ATP13A1 Manganese-transporting ATPase 13A1 yes no 0 0 0 5 0 1 50.909 50.984 3 3.5957E-11 14175 20230619_1885_Aki_TMTPro18x_K_F5 151.44 108.97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16304 466 15451 30998 24840 24840 1 9606 Homo sapiens 0.11021392767884208 LIPLVLGLQEQLR Unmodified 1490.9184 0.91844921 2014 Q6PKD4;A8K2A8;O94829 IPO13 Importin-13 yes no 0 0 0 5 0 1 66.018 66.061 3 0.014212 20581 20230619_1885_Aki_TMTPro18x_K_F5 59.898 49.945 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16305 2014 15452 30999 24841 24841 1 9606 Homo sapiens 0.19262672096442657 LIPTELRR Unmodified 996.60801 0.60801411 3027 H0Y714;Q96G21;B8ZZ47;F8WCN0 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 yes no 0 0 1 3 0 1 43.596 43.665 3 0.00051323 11209 20230619_1882_Aki_TMTPro18x_K_F3 111.82 41.817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16306 3027 15453 31000 24842 24842 1 9606 Homo sapiens 0.1095744195114321 LIPTLVSIMQAPADK Unmodified 1595.8957 0.89566485 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 4.5 0.5 1 1 65.826 65.854 3 1.1593E-06 20773 20230619_1883_Aki_TMTPro18x_K_F4 120.53 107.9 21374 17243 14775 20178 19739 25289 22077 20535 29690 24817 22794 27505 30077 30751 26230 34055 36891 45107 19711 15812 15672 20194 20230 25069 22340 21426 29541 24961 24062 27908 30338 31785 27373 34757 35251 42695 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46071000 16307 4386 15454 31001;31002 24843;24844 24843 2 9606 Homo sapiens 0.12155284916661913 LIPVHQVR Unmodified 960.58688 0.58688473 2289 B2RAX6;Q9Y5J1;J3KSR7 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 0 0 0 3 0 1 38.784 38.838 3 0.00086325 9139 20230619_1882_Aki_TMTPro18x_K_F3 120.52 68.833 54025 46011 76840 65717 86961 72048 67508 68530 54519 64867 65036 53254 63693 37845 71831 80727 72815 63523 50142 42275 76200 64841 88710 72344 68866 70150 56791 65350 66132 54170 65325 41875 73001 79431 69595 60550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83337000 16308 2289 15455 31003 24845 24845 1 9606 Homo sapiens 0.1050147664227552 LIPVSDINDK Unmodified 1112.6077 0.60773933 2042 Q53H22;A8K4H7;Q06203 PPAT Amidophosphoribosyltransferase yes no 0 0 0 5.5 0.5 1 1 55.647 55.717 3 0.0019422 16333 20230619_1886_Aki_TMTPro18x_K_F6 85.958 71.751 280600 259820 291630 278380 257890 303290 300330 304600 340380 347150 348120 364890 360950 316960 357090 408850 386480 388120 259760 237960 294760 280130 271820 304890 301720 312210 344900 349070 357540 368030 367900 333300 365090 408070 369510 368850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76847000 16309 2042 15456 31004;31005 24846;24847 24847 2 9606 Homo sapiens 0.05593977440616982 LIQDQQEQIQHLK Unmodified 1619.8631 0.86311917 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7 RAD50 DNA repair protein RAD50 yes no 0 0 0 5.5 0.5 1 1 48.891 48.969 3 1.2747E-15 13420 20230619_1886_Aki_TMTPro18x_K_F6 187.6 157.12 151720 112300 151840 152440 130980 149150 169840 148770 184730 174530 163640 187960 174820 168000 188710 197680 186150 207650 140210 103180 153940 150600 138760 151040 169430 152790 186520 175440 169620 189450 178880 175450 191570 198710 178290 197040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 782560000 16310 4309 15457 31006;31007 24848 24848 1 9606 Homo sapiens 0.07798213838032098 LIQELAK Unmodified 813.496 0.49600404 3263 O43681;B4DEE5 ASNA1 ATPase ASNA1 yes no 0 0 0 8 0 1 55.172 55.239 2 0.0094732 15774 20230619_1888_Aki_TMTPro18x_K_F8 124.08 19.631 352160 280860 292030 364220 343110 396320 373000 362010 428090 391270 442470 428730 433830 356150 395100 484920 473380 462730 325130 257840 302900 361240 353490 397470 376000 373080 433420 395080 452800 431330 441200 376570 407270 483710 452100 439780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 337680000 16311 3263 15458 31008 24849 24849 1 9606 Homo sapiens 0.08179587874133176 LIQEWNSVDLR Unmodified 1371.7147 0.71466402 1643 A0A7I2SU25;Q6QNY7;Q6QNY6;Q6QNY5;Q9Y223-5;Q9Y223-3;Q9Y223;Q9Y223-2 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase;UDP-N-acetylglucosamine 2-epimerase (hydrolyzing);N-acetylmannosamine kinase yes no 0 0 0 6.5 0.5 1 1 60.736 60.787 2 1.4733E-06 18449 20230619_1886_Aki_TMTPro18x_K_F6 183.85 135.29 40909 38338 44603 47616 39800 43028 43342 41745 46053 48260 54242 47909 52569 45435 51817 57533 51270 58644 37890 35159 44943 47267 41795 43840 43605 42933 47094 48413 55157 48612 53667 47591 52710 57665 49111 55662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23478000 16312 1643 15459 31009;31010 24850 24850 1 9606 Homo sapiens 0.04367527654994774 LIQLMEEIMAEK Oxidation (M) 1462.7411 0.74113805 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 1 0 6 0.816 1 1 1 65.66 65.697 3 0.00071265 20377 20230619_1887_Aki_TMTPro18x_K_F7 89.193 72.94 51863 49500 49581 55391 59053 54467 55390 51291 60874 57533 67376 59729 62587 56174 68329 66533 63337 75817 47988 45348 50717 55453 60412 55126 56235 52813 61953 57892 68579 60463 64309 58616 69102 67216 60735 71868 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 112820000 16313 1328 15460 31011;31012;31013 24851;24852 24852 838 2 9606 Homo sapiens 0.02827712439784591 LIQLMEEIMAEK Unmodified 1446.7462 0.74622343 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 7.5 0.5 1 1 68.022 68.042 3 0.018136 21165 20230619_1888_Aki_TMTPro18x_K_F8 61.11 40.447 2708.9 3166.7 2495 2610 3611.1 3298.8 3228.5 3251.1 4655.3 3081.9 3597.3 5159.6 3586.8 2440.2 2990.2 3840.3 2631.8 3390.3 2509.9 2892.4 2569 2694 3649.9 3287.2 3319.7 3320.5 4614.7 3187.6 3749.5 5046.2 3628.1 2680.3 3036.6 3809.1 2526.8 3222.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9098300 16314 1328 15460 31014;31015 24853 24853 1 9606 Homo sapiens 0.04072016302393422 LIQNNHYAMEDVATR Oxidation (M) 1789.8417 0.8417318 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 1 0 4.5 0.5 1 1 39.934 40 3 3.7754E-11 9540 20230619_1883_Aki_TMTPro18x_K_F4 163.9 146.69 62881 50512 54034 60206 62751 67438 62408 71166 76522 73574 85734 82856 80952 68971 75251 79652 76796 89566 58070 46331 55789 60110 64510 67739 63412 72479 77507 74498 87293 83240 82490 72179 76737 80415 73551 84918 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139850000 16315 1022;3868 15461 31016;31017 24854 24854 590 1 9606 Homo sapiens -0.021595392530116442 LIQNNHYAMEDVATR Unmodified 1773.8468 0.84681718 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4.5 0.5 1 1 45.075 45.136 3 7.3016E-09 11696 20230619_1885_Aki_TMTPro18x_K_F5 131.24 120.45 271930 217850 269200 221280 291810 340640 312010 298000 382860 271630 322410 256060 285680 214580 321830 246650 275950 197510 251390 199530 273790 224970 302100 334440 315550 306560 383150 275710 331660 259480 294200 224470 323640 244900 263930 188410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198720000 16316 1022;3868 15461 31018;31019 24855 24855 1 9606 Homo sapiens -0.009152353904028132 LIQNNHYAMEDVATRR Unmodified 1929.9479 0.94792821 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 7.5 0.5 1 1 41.432 41.467 4 5.1698E-34 10079 20230619_1888_Aki_TMTPro18x_K_F8 260.18 207.91 39325 30755 43347 33801 44202 39588 45207 44640 49154 46148 49248 46795 46358 47908 55983 51119 61937 53597 36384 28191 43643 34005 45786 39744 45660 45283 49852 46584 50408 47533 47932 49519 57055 51479 59145 50911 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110670000 16317 1022;3868 15462 31020;31021 24856 24856 1 9606 Homo sapiens 0.020152163123157152 LIQQQLEK Unmodified 998.57605 0.57604528 4014 Q549N5;Q9Y5M8;H7C4H2 SRPRB Signal recognition particle receptor subunit beta yes no 0 0 0 7 0.816 1 1 1 49.588 49.666 2 0.00048378 13393 20230619_1888_Aki_TMTPro18x_K_F8 178.3 76.654 66255 50140 61356 70709 61055 79774 79857 83374 103030 74037 79391 81887 86186 70429 73340 105350 93446 91369 61198 46082 62815 69815 64087 80000 80119 84663 102590 75612 82868 82463 87156 74857 76091 104420 89200 86939 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207930000 16318 4014 15463 31022;31023;31024 24857 24857 1 9606 Homo sapiens 0.07670029477333173 LIQSHPESAEDLQEK Unmodified 1722.8424 0.84244331 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 3.5 0.5 1 1 44.529 44.587 3 9.8967E-06 11555 20230619_1883_Aki_TMTPro18x_K_F4 113.4 98.519 92880 65792 75804 94078 88018 96508 108770 106180 80507 97905 123800 117220 104040 103790 104480 109030 128460 110510 85681 60494 78737 92680 90957 97594 107610 107600 85344 99901 124100 117710 106940 107690 107580 109580 122550 105010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 426770000 16319 1022;3868 15464 31025;31026 24858 24858 1 9606 Homo sapiens 0.00993578667703332 LIQYCQSK Unmodified 1038.5168 0.51681584 435 A0A024R7A8;P15121;Q59EL5;E9PCX2 AKR1B1 Aldose reductase yes no 0 0 0 2 0.816 1 1 1 47.458 47.51 2 0.0015506 13021 20230619_1882_Aki_TMTPro18x_K_F3 158.56 112.23 440720 374010 392470 409420 477190 492800 439760 421170 532670 211530 237260 187100 193640 150860 344610 193850 247700 158910 407240 342710 404000 411750 487940 490520 448220 429720 524580 224920 255410 190180 206170 159110 341540 192670 237320 151630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 323280000 16320 435 15465 31027;31028;31029 24859;24860 24860 2 9606 Homo sapiens -0.0009018980849759828 LISEILSESVVPDVR Unmodified 1654.9142 0.91415169 156 Q969G3;A0A2U3TZQ7;B4DGM3;A0A2R8Y855;A0A2R8Y4T4;A0A2R8Y7I9;A0A2R8Y7U4;J3QKS7;A0A2R8Y765;A0A024R1S7;Q969G3-5;Q969G3-6;Q969G3-3;Q969G3-2;Q969G3-4;A0A2R8YES3;J3QR61 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 0 0 0 6.5 0.5 1 1 65.32 65.356 3 2.7932E-05 20495 20230619_1886_Aki_TMTPro18x_K_F6 98.676 79.601 28091 18994 25727 19464 21106 23991 23596 22179 38478 15539 21171 15715 18957 16286 25568 18048 18414 17193 25928 17411 26221 19703 22398 23881 24100 22609 37573 16121 22411 16000 19734 16873 25446 18087 17679 16343 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53145000 16321 156 15466 31030;31031 24861 24861 1 9606 Homo sapiens 0.11289118092213357 LISKPVASDSTYFAWCPDGEHILTATCAPR Unmodified 3362.6064 0.60638249 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;Q9BY44-2;H7C5R5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 1 2 0 1 61.237 61.248 4 1.648E-09 19093 20230619_1881_Aki_TMTPro18x_K_F2 101.34 89.027 17034 16235 19526 18084 13654 15928 21428 18687 14756 19170 20838 16006 15083 10398 22048 10877 12518 13006 15786 14873 19535 18098 14833 16338 20957 18923 15657 19230 20827 16201 15873 10955 21710 11079 12072 12329 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 384730000 16322 4468 15467 31032 24862 24862 1 9606 Homo sapiens 0.019583550156312413 LISLTDENALSGNEELTVK Unmodified 2045.0528 0.052830017 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;A0A7P0TBC2;Q96GW1;A0A7P0T885;A0A7P0T8R3;A0A7P0Z405;B4DQX3 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 5 0 2 69.069 69.112 3 0.01688 22068 20230619_1885_Aki_TMTPro18x_K_F5 48.883 32.577 2755.2 2824.4 2925.1 3055.4 2212.6 3618.3 2629.6 3770.8 2459.4 2316 3272.4 3316.7 4420.4 4155.4 4127.3 4201.4 3608.9 3209.6 2553 2586.1 2948.5 3075.6 2374 3616.7 2627.6 3799.8 2546.6 2294 3371.1 3355.5 4462.4 4256.6 4173.6 4167 3455.2 3060.4 2 2 2 2 2 2 2 2 2 1 2 2 2 2 2 2 2 2 2470600 16323 3452 15468 31033;31034 24863;24864 24864 2 9606 Homo sapiens 0.07210571479231476 LISQDIHSNTYNYK Unmodified 1694.8264 0.82639932 2409 B3KT11;C9JA08;Q96D46;B3KMN5;B4DKU1 NMD3 60S ribosomal export protein NMD3 yes no 0 0 0 1 0 1 47.782 47.782 3 0.00057258 13462 20230619_1880_Aki_TMTPro18x_K_F1 88.224 69.392 25941 20736 22988 28624 19752 20409 23043 23850 25621 27177 24928 27738 28865 21306 27311 34954 26274 26310 23961 19049 23578 28143 20859 21343 23134 24232 25947 27292 25805 27922 29239 22910 27785 34399 25149 25081 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18532000 16324 2409 15469 31035 24865 24865 1 9606 Homo sapiens 0.006779172214919527 LISSSQVDQETGFNR Unmodified 1679.8115 0.81147753 3249 W0S1J7;O43164-2;O43164 Pe7Fe14;PJA2 E3 ubiquitin-protein ligase Praja-2 yes no 0 0 0 5 0 1 50.553 50.629 3 9.65E-05 14015 20230619_1885_Aki_TMTPro18x_K_F5 106.42 95.153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16325 3249 15470 31036 24866 24866 1 9606 Homo sapiens -0.0012357464654542127 LISSVDPQFLK Unmodified 1245.6969 0.69688869 1963 Q9P0N4;A6NDF3;Q9BVG4 PBDC1 Protein PBDC1 yes no 0 0 0 1 0 1 61.97 61.97 3 1.2282E-05 19276 20230619_1880_Aki_TMTPro18x_K_F1 142.83 112.5 33266 27412 28629 35544 27390 42048 38892 38393 44994 42374 36202 34812 42000 39026 41984 44604 37745 44295 30726 25162 29513 35297 28966 41904 38720 39574 45149 42401 37814 35836 42701 40408 42476 44711 36200 42051 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180840000 16326 1963 15471 31037 24867 24867 1 9606 Homo sapiens 0.08386812400135568 LISTLIYK Unmodified 949.58482 0.58481905 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;A0A7I2YQX3;C9JKM9 XPO1 Exportin-1 yes no 0 0 0 5 0 1 62.1 62.148 3 0.070923 18901 20230619_1885_Aki_TMTPro18x_K_F5 45.382 26.651 44515 28806 41620 42533 30321 43330 38955 40570 50956 41544 40989 39899 45741 42454 42709 45016 41312 43182 41086 26508 42363 41824 32727 43651 39165 41667 50808 41916 42726 40677 46413 43829 43419 45095 39554 41027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17058000 16327 3228 15472 31038 24868 24868 1 9606 Homo sapiens 0.10801003113806473 LISWYDNEFGYSNR Unmodified 1762.7951 0.79509919 3382 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 7.24 1.66 1 1 4 11 68.382 68.406 2;3 1.7323E-69 19290 20230619_1887_Aki_TMTPro18x_K_F7 341.35 298.05 2789000 2214300 2456700 2576900 2087400 2512700 2548500 2464000 2784200 2914000 2808200 3286300 3129200 2946500 3184200 3279900 2939900 3580100 2575800 2030600 2518500 2572400 2212300 2544700 2550900 2533600 2825400 2932000 2898400 3306000 3187600 3067200 3224300 3307200 2819700 3394900 9 8 10 9 10 9 10 9 10 10 10 10 9 10 10 8 10 10 17208000000 16328 3382 15473 31039;31040;31041;31042;31043;31044;31045;31046;31047;31048;31049;31050;31051;31052;31053;31054;31055 24869;24870;24871;24872;24873;24874;24875;24876;24877;24878;24879;24880;24881;24882 24870 14 9606 Homo sapiens -0.055786558126555974 LITDLQDQNQK Unmodified 1314.6779 0.67794416 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;B4DS27 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 4.5 0.5 1 1 52.42 52.469 3 0.00014551 15127 20230619_1883_Aki_TMTPro18x_K_F4 115.91 66.934 102260 88038 91752 98700 99043 105250 107530 104370 131160 107560 119990 120850 123170 101970 112010 139620 130630 129890 94511 80684 94228 98918 102550 105950 108650 106800 131750 108980 123770 121510 125080 107790 115280 139070 124800 123480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 272870000 16329 2727 15474 31056;31057 24883 24883 1 9606 Homo sapiens 0.03319231038426551 LITDNTVEER Unmodified 1188.5986 0.59863121 940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370;D7EZH4 SMARCA1 Probable global transcription activator SNF2L1 yes no 0 0 0 1.5 0.5 1 1 44.208 44.249 2 2.9195E-26 11809 20230619_1881_Aki_TMTPro18x_K_F2 276.75 226.71 116470 95863 95070 116410 135160 144610 128230 121390 154380 117290 144530 137590 136740 125080 126620 140190 150950 139600 107540 87936 99088 116200 137080 143570 130450 125540 155260 119480 148350 138410 139410 130170 130350 140580 144110 132640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113790000 16330 940 15475 31058;31059 24884;24885 24885 2 9606 Homo sapiens 0.011875840842549223 LITEDVQGK Unmodified 1001.5393 0.53932542 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;B7Z3M5;D6RB09;E9PFI5;H0Y8L7;D6RAS7;D6RED7;D6RGE0 RPS3A 40S ribosomal protein S3a yes no 0 0 0 4 0.816 1 1 1 49.173 49.23 2;3 6.2358E-16 13792 20230619_1882_Aki_TMTPro18x_K_F3 221.16 155.02 939210 755660 842120 885690 1055800 1034100 1012900 937900 1276400 1061600 1077500 1026900 1207500 928530 967890 1304700 1282100 1054500 867630 692990 866850 885820 1078200 1032800 1031500 968250 1277300 1065900 1120000 1041500 1216600 981030 1007500 1290100 1222100 1005100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1717099999.9999998 16331 3694 15476 31060;31061;31062 24886;24887;24888;24889 24886 4 9606 Homo sapiens 0.03861732860775646 LITGLGVGR Unmodified 884.54435 0.54435122 4412 Q9BQG0;Q9BQG0-2;B4DZZ1;B4DWP5 MYBBP1A Myb-binding protein 1A yes no 0 0 0 4 0 1 52.542 52.566 2 0.013741 15186 20230619_1883_Aki_TMTPro18x_K_F4 78.377 54.608 118120 104200 126950 129260 123910 144510 134070 125240 134990 138420 129260 110360 134030 102670 136680 115620 129590 108230 109340 95580 128200 128680 129220 144520 134650 129650 137320 138350 133010 113060 136670 106920 138420 115660 123920 102950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57853000 16332 4412 15477 31063 24890 24890 1 9606 Homo sapiens 0.09746081514049365 LITGMDR Unmodified 804.41637 0.41637351 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;Q6ZME7;K7ESG6;K7ELI6;C9JPC3 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 7 0 1 45.256 45.341 2 0.003495 11447 20230619_1887_Aki_TMTPro18x_K_F7 120.65 79.343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16333 167 15478 31064 24891 24891 1 9606 Homo sapiens 0.0063419792849117584 LITKPSEGTTLR Unmodified 1314.7507 0.75071518 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2;Q05D78 MRE11A Double-strand break repair protein MRE11A yes no 0 0 1 2 0 1 44.654 44.737 3 0.0029505 12014 20230619_1881_Aki_TMTPro18x_K_F2 75.618 35.909 282000 210650 262370 283180 277280 311220 315340 296820 310100 321250 351270 331510 365100 319130 320490 322760 308080 257020 260470 193510 268530 280340 287850 312190 315610 304950 317910 323670 358950 335690 370030 329630 325990 320730 294530 245010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 317700000 16334 229 15479 31065 24892 24892 1 9606 Homo sapiens 0.10592984831851027 LITLEEEMTK Oxidation (M) 1221.6163 0.61625511 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;Q96C96 P4HB Protein disulfide-isomerase yes no 0 1 0 3 0.816 1 1 1 55.027 55.052 2 1.5401E-05 16350 20230619_1882_Aki_TMTPro18x_K_F3 160.36 124.45 151550 128310 141240 151270 171830 176530 167930 170690 193260 173710 185240 188700 197420 165000 192570 201010 196220 212590 140090 117650 144840 151240 175900 176510 170330 174840 195120 175890 191020 190120 200850 172920 196150 202040 187820 201730 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 84349000 16335 537 15480 31066;31067;31068 24893;24894;24895 24893 312 3 9606 Homo sapiens 0.014311632949329578 LITLEEEMTK Unmodified 1205.6213 0.62134049 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;Q96C96 P4HB Protein disulfide-isomerase yes no 0 0 0 4 0 1 62.307 62.312 3 8.2082E-05 19278 20230619_1883_Aki_TMTPro18x_K_F4 133.23 110.59 139900 113340 138900 147310 130290 164640 149360 149240 179520 161090 166820 174280 182010 157570 174510 182930 162050 194090 129350 104040 141130 146180 136730 164750 150450 153870 180640 162630 172490 175770 184920 164430 176960 184030 155390 184110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 237200000 16336 537 15480 31069 24896;24897 24896 2 9606 Homo sapiens 0.026754671575417888 LITPAEK Unmodified 770.4538 0.45380487 4077 Q5VW32-2;Q5VW32;Q5VW33;F5GXQ0;B7Z953;B7Z1V1 BROX BRO1 domain-containing protein BROX yes no 0 0 0 6.5 0.5 1 1 46.698 46.786 2 0.018192 12109 20230619_1887_Aki_TMTPro18x_K_F7 107.59 69.46 192040 126540 184470 189300 249210 287380 226960 250020 312500 242980 292370 289590 269730 254040 249320 270120 318100 293130 177300 116450 189040 187200 253410 282150 232770 257660 312450 247530 299860 290720 275280 263960 257780 272450 303510 278270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78063000 16337 4077 15481 31070;31071 24898;24899 24899 2 9606 Homo sapiens 0.05939612465761002 LITPAVVSER Unmodified 1083.6288 0.62880913 3727 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 0 7 0.816 2 2 2 50.452 50.53 2;3 0.00014463 13717 20230619_1888_Aki_TMTPro18x_K_F8 98.257 70.053 587310 491730 531900 559320 534350 650030 579310 620480 729520 513410 524100 488890 549930 428570 556490 561280 528380 479060 542720 450760 545190 560640 556900 649660 586190 632910 725880 524260 548380 495760 560550 451170 564220 557350 505480 456070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3721399999.9999995 16338 3727 15482 31072;31073;31074;31075;31076;31077 24900;24901;24902 24902 3 9606 Homo sapiens 0.09033987540146882 LITQTFSHHNQLAQK Unmodified 1764.9271 0.92711641 4703 Q9Y266;Q9H2R7;A0A0A0MSU9;A0A0A0MSS4 NUDC;NPD011 Nuclear migration protein nudC yes no 0 0 0 6 0 1 44.617 44.705 4 5.2193E-19 11542 20230619_1886_Aki_TMTPro18x_K_F6 211.7 189.94 155960 113480 143230 157070 130780 184170 161380 160070 199130 155430 153510 159780 182200 139200 158360 170460 207710 211370 144020 104290 146510 155340 138050 183470 162090 165090 198800 157580 160940 161320 183890 146080 164230 173030 198280 200310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39003000 16339 4703 15483 31078 24903;24904 24904 2 9606 Homo sapiens 0.0752499399500266 LITTQQWLIK Unmodified 1242.7336 0.73360855 0 D2Y6Y7;W8D8V4;X5BW47;X5BSQ0;X5BSN2;X2CNL3;V5JH69;X2C587;W8DBL0;W0C6Y6;W8D860;X5BZD6;W8D5L5;W8D5F7;W8D2P9;W5VMK3;W8DFC5;V5JGY5;U5YWI5;X5CDZ8;X5BWE9;X5CFG7;Q4ZFC1;V5JSZ5;V9N4L5;V9M6K4;V9K6C5;V9K4I6;V9K052;V9JTU3;V9JF96;V9JB23;W0C8M5;V9N8I7;V5JSF4;V5JS27;V5JQM7;V5JPE6;V5JMC8;V9NAZ0;W0C6A8;V5JTX2;U5YV11;T1SUY8;T1STW0;U5L389;U3LBN0;U5L326;U5KQ12;U5KPX6;U3LUU5;U3LS18;U3LRA8;T1WUI6;U3LQN5;T1SXS5;T1STR3;U3LBD0;U3L924;U3L4G0;U3L3I1;U3L335;U3KWA8;U3LCA2;A6ZF88;U5YSN6;R9Y5X7;S4SQC6;T1STG6;T1SSU2;T1SSS1;T1Q6J8;S5SA44;T1SWT7;S5S9I7;T2HJH9;S4UQD8;R9ZRI6;R9ZPP1;R9ZP27;R9Y9G5;R9Y9A7;R9Y9A2;S4V2L4;Q5S9G0;V9N5U4;Q5S956;A0A1V0MBY7;Q9B1D3;R4IA57;R4I9Q0;R4I9N7;Q9B2W7;Q9B2V5;Q7YCD1;Q9B2U2;Q8HBV1;Q9B1A9;R9UCI0;Q9B185;Q8WCX3;Q8WCX0;Q8WCW5;Q8WCV8;Q9B1L8;R9Y3L7;R9Y256;R4IBN0;Q8M7T2;Q6VHA0;Q7YED8;Q85KV7;Q85KU2;Q85KT4;Q85KR7;Q85KR5;Q7YEG6;Q7YEG4;Q7YEF3;Q8HNQ5;R9Y4V1;Q7YED4;Q7YED3;Q7YED2;Q7YCH3;Q7YCG6;Q7YCD5;Q85KZ2;Q7YEE6;Q7Y843;Q7Y788;Q6RNG3;Q6VLT0;Q6VHB0;Q6VLP4;Q6VL11;Q6VKS1;Q6VJI3;Q6VJ77;Q6VIX0;Q7Y802;Q6VHW2;Q6RQ23;Q6RMK9;Q6UG00;Q6RRX7;Q6RRV0;Q6RRA9;Q6RQW5;Q6RQU7;Q6VHL0;R9Y4G7;Q7Y6X6;Q9B1K9;Q5SB58;Q6RLU8;Q6RLS1;Q6RKY6;Q6RKX7;Q6R0Z3;Q5XSM6;Q5XS83;Q6RQR1;Q5SB97;Q5SAZ3;Q5SAH4;Q5SA70;Q5S9N8;Q5S9J9;Q5S9H3;Q6RNI4;Q6RNJ5;U3LBH8;L7SDL5;W8D9J2;Q4GSG2;Q4VFM9;Q4VFK9;Q4GDG1;Q4VFF2;Q4GV61;Q4GUH7;Q4GU60;Q4ZF95;Q4GSE9;Q4VGD2;Q4GRN9;Q4GR70;Q4VFB5;Q4GD70;Q4G992;Q4G8Y8;Q4EXV0;Q4ZEE6;Q4VFU7;Q4ZEI5;L7SA60;Q4GFH6;Q4GM79;Q4GL52;Q4GKN3;Q4GK64;Q4GJ37;Q4GIK5;Q4GH61;Q4GFR7;Q4ZEL1;Q4GPF9;Q4GEP0;Q4GE32;Q4GDK0;Q4GQR4;Q4GQS7;Q4GQZ2;Q4GR31;Q4GFI9;Q4EXN4;Q4EXI2;Q4EXG9;Q4F5R8;Q4F3S9;Q4F5G4;Q4F5F1;Q4F4Z6;Q4F4R7;Q4EZ28;Q4F4F0;Q4F459;Q4F407;Q4G8X5;Q4EXF6;Q4F2Y0;Q4F296;Q4F0V2;Q4F0F9;Q4F4D7;A6ZEV9;A6ZG24;A6ZEL8;Q4F5T1;Q4GPN7;Q2HL42;Q4EWS2;Q4EWN3;Q3S988;Q4EYJ6;Q2LHW7;Q2HLG7;Q2HLF6;Q4F6K4;Q2HL94;Q27GX8;Q1ZY36;Q15IZ5;Q15IL5;Q2LH31;Q4ZFD4;Q4EYS4;Q4F0E6;Q4GMY9;D3WYZ0;Q4GT85;L7YL59;Q0Z7K1;Q0Z7G2;Q0VXH8;Q0VW08;I7D8P0;Q0VV46;Q06UF8;L7XJ25;L7YKA8;Q0ZEN3;L7Y075;L7XTN8;L7XLN7;Q09U65;Q0ZK68;I6R7U9;I6MDZ8;Q0ZFE3;Q0Z7R3;Q0ZFG9;H9T0U2;J7K731;L7P4X9;L7NVL6;L7NV50;L7NV23;K9R230;K9MX48;K9M3B9;K7WVK3;L7XKE8;Q4GQ17;J7K441;J7HTA3;J7HST1;J7HRK4;J7HR34;L7SKU1;L7SRW4;K4GY12;H9SNR7;H9SHT7;H9SH14;I3Q4T9;H9T335;I3Q4R3;I3Q468;I1E4I7;I0B6N6;I6MMM6;H9T7A2;H9T6E2;H9T5P5;I3Q8L5;H9SF77;H9SZG1;H9SY95;H9STU8;H9STS2;H9T776;Q0ZK81;Q15GW9;Q15IK2;I3Q644;Q06U80;H9RZ95;H9SEJ3;H9SDV9;H9SBL6;H9SAF0;H9S9Y1;H9S8D5;H9S385;I3Q6Q2;H9S0I6;H9RY47;H9RVR5;H9RTM9;H9RQ86;H9SP73;H9SR23;H9SRS0;H9SRX2;Q85KY8;H9RQ40;H9RN98;H9QTU3;H9RCN4;H9RCE3;H9RB12;H9R9T3;H9R203;H9QWE0;H9P592;H9QVF2;H9QSY1;H9RJH6;H9QRR5;H9QRN9;H9QQA8;H9QPX8;H9QP16;H9QLE3;H9QH48;H9QVC6;H9RHH4;H9QJB5;G9LB87;H9QD83;H9QBC0;H9QA54;H9Q9E4;H9Q2V6;H9Q2F0;H9Q0D5;H9PYL1;H9PQV7;H9PQP2;H9QEH5;H9PNM7;H9PLI6;H9PI66;H9PFC8;H9PCV7;H9P6L0;H9PTZ9;G9IES7;E5E003;H9P4E3;H9LKK9;H9NRA4;H9P0H8;H9P048;H9NZ34;H9NXQ3;H9NTE5;H9NSN5;H9NRK8;H9LLP7;H9P1N1;H9LJM3;H9MN09;H9MIG0;H9M442;H9M3X7;H9LRH8;H9LPU2;H9LP54;H9NQF5;H9P4A4;H9LLS3;H9LL75;E5E094;H9LH24;H6WIT7;H6WHW2;H6WHI2;H6WH00;G9LMV6;H9LKN6;G9LLL4;G9LKE8;G9LI16;G9LGW3;G9LGH0;G9LFU9;G9LES2;G9LE51;G9LC88;G9LLD6;G9LBA0;E9NA19;D6C298;G4VZQ0;G8JD62;G5D8J5;G4W2G2;G4W1R5;G4W1K0;G4W157;G4W0D4;F1CIE7;G4VZM4;F6K6M4;G4VZ16;G3C9Y6;G1JYS7;F8VBB0;F8V4U1;F8V422;F8V3Y3;F5BA93;F6N1T4;F2WHK1;H9RLD9;F2WHS9;A0A096VTU4;B1PIH2;A0A023I7H5;F2YWM7;F2WIP1;F2WIH6;F2WID7;F2WI85;F1B850;E7E2Y5;F2WGR5;F2WGM6;F2WGK0;F2WGE8;F2WG57;F2VPX4;F1CIQ1;F2WHZ4;G4VZS6;F1B837;F1B811;E9P2Y5;E7CPM3;F1B6U5;F1B5V7;F1AZB5;F1AZ37;E9P7C2;E9P6Q2;F1B824;F1B7N7;E5E042;E9NJY3;E9LCR9;E9K9C5;E9K908;E9JXI6;E7E3U7;E7E3S1;E5QCD4;E9NKT2;E7E3A2;E5QBE8;G9B0G4;E5KYE2;E5FWR5;E5FWN9;E5F549;E5EXA0;E5E1V3;E5E1S7;E5E1Q1;E5LR28;E5E143;E5E0V2;E5E0T9;E5E0Q0;E5E0L1;E5E0I5;E5E0C0;E5E0W5;H9MSB7;E5DZZ0;E5DYX6;D6N474;E5DYI3;E5DYF7;E5DYE4;E5DY40;E3W6H4;E2JKH1;E2JKF8;D6N5X2;D8L3B8;E2FQ77;E2DG83;E1B4I5;E1AXS4;D9MZX0;D9MYY6;D8L4E5;D8L3N5;E2DGN9;E2J3Y5;E5DYK9;B3DE99;D7NMC1;D7NMA8;D7SF29;D7PAH3;D7P9M4;D7P9H2;D7P9F9;D7P9D3;D7NUP8;D7NM56;D8L392;D8L327;D6R7T3;D6R6F7;D6R5S3;D6R5P7;D6N7S2;D6N624;H9RKF1;D8L1J0;C0LJY4;D6N3H7;D1G3Z7;D6BZN8;D2Y572;D5K701;D5I8G5;D5I8A0;D5I7X0;D5I7T1;D3KD25;D3KAZ0;C8YI12;D0VDU7;C8YFB3;D0V1V0;D0UTX4;D0UTW1;D0UTS2;C9D6E1;C9D637;C9D5T3;D6BZD4;C0LU52;C8XV28;C8YHY6;C8YDR7;C8YCE9;C8Y6T6;C8Y5J4;C8Y3L8;C8Y0Y2;C9D5C7;C8Y007;C8XV02;C8CCZ1;C8CCX8;C7SJU5;C7SJA0;C7B333;C7AAU4;C5MN37;C8YGB4;B9U5I9;H9P4K8;B8X4J0;B9EFL9;B9EEV9;B9EDY4;B9EDU5;B8XZR3;B8XYH1;B8X5R9;B2XHD6;B9EFX3;B2XG09;B7ZIX9;B7TPA5;B7TCM6;B6RGC6;B5M880;B5M7X6;B5M7I3;B8RFM5;B2XGZ3;B4YG72;B4YD67;B4YBC1;B3DE47;B2Z680;B2Z592;B2YBN4;B2YAA3;B2Y9P5;B2Y9B5;B2XQ41;B2XNN7;B2XM45;B2XKS8;B2XKN9;B2XKM6;B2XK18;B2XI44;B2XHM6;B4YBA8;B8R3B7;B2KLT0;B2KLZ5;B2CB26;B2XFD8;B2XER9;B2XEL7;B2XEH8;B2WS29;B2MZ69;B2MZ39;B2MYP5;B2MXH9;B1NUN5;B2XEZ6;B2KLM8;B2KLD7;B2D5C6;B2D4T1;B2D3Q0;B2D398;B2D0N3;B2CB39;B1W8I7;E5DZS5;A7XUC2;B1NTU9;B0EWL8;A8WF83;A8WDK6;A8R1T6;A8QTE5;A8QT67;B1PI24;A8JLH9;A7XTZ0;A7XTK2;A7XSM8;A7LDA2;A6ZIR4;A6ZHP8;X5CIF1;A6ZFB4;Q4F3R6;A0A1V0FTV2;A0A7H1D1U8;A0A8A6VHD0;A0A8F5ZBU3;A0A8F5VJB9;A0A8E5I460;A0A8B6QQW1;A0A8A6WUM5;A0A8A6WRX9;A0A8A6WQL5;A6YW69;A0A8A0WRG2;A1Z4E8;A0A8A0WPW2;A0A8A0WM96;A0A888VH72;A0A7U3TL40;A0A7T8G675;A0S0T0;A0S0Z5;A0A7T5BMW1;A1E1T6;A6Z4T0;A0A344AK39;A6Z659;A6YVN9;A6YVQ2;A6YVS8;A6ZCZ8;A6ZB88;A6Z7G3;A6Z7D7;A6Z6R7;A6YW31;A1Z4L3;A1Z4G1;A6Z571;A6Z2Z4;A6YYN7;A6YXS6;A6YX94;A6YWX8;A6Z698;A0S1G1;A0S2B3;A1E1E3;A0A343RY28;A0A343LF01;A0A343RVZ9;A0A4D6CM06;A0A343RK41;A0A343M3S8;A0A343LPZ1;A0A343LPX8;A0A343LMS6;A0A343LHK6;A0A4D5ZD68;A1DVF1;A0A343L0U9;A0A343SGN2;A0A343KWU5;A0A344AJV0;A0A344AJX5;A0A344AJY9;A0A343KVL6;A0A344AK15;A0A343RZ16;A1Z519;A0S525;A1DV99;A1DTI3;A1DTA5;A0SCX3;A0SBX2;A1Z496;A0SBS0;A0A343SD60;A0S590;A0S3X2;A0S3K5;A0S2V8;A0S2R9;A0S2H8;A0SB36;A0A4D6CPA9;X5CJR1;A6YUU0;A0A344AK24;A0A1V0FTL9;A0A6B9RCC6;A0A7G4BFH9;A0A7G4BFB4;A0A7D9MXM8;A0A7D6HTK9;A0A7D5TN06;A0A7G4BLZ1;A0A7M4CDU5;A0A7G4BQK2;A0A5J6MG81;A0A7G4BKB9;A0A5J6MA53;A0A5J6M9S8;A0A5J6E7T1;A0A5B9R0V0;A0A4Y6A4K8;A0A4Y6A423;A0A4Y6A3M9;A0A7G4BPZ4;A0A7G4BFS0;A0A6G9IL12;A4ZYE7;A0A7D5TGH2;A0A6N0A0P8;A0A6M4AEQ1;A0A6H0MVH2;A0A6H0MTD4;A0A6H0MT63;A0A6G9L8E1;A0A6G9L7P1;A0A6G9L5R1;A0A7G4BQ85;A3FPA1;A0A7D5TGU4;A0A7D5TL38;A0A7M4CDJ9;A0A7G5XR57;A0A7G4BTU6;A0A7G4BTQ7;A0A7G4BR47;A0A7D5T742;A0A4Y6A3G4;A0A4Y6A363;A0A4D6FHE3;A0A5P9RNG4;A5JYK3;A0A5P9RM99;A0A343IC64;A0A649YF38;A0A4D6CQ23;A0A7T0Q637;A0A7T5BNF5;A6YUS7;A6YUI6;A0A649YED7;A0A4D6CVD1;A4ZM68;A4ZM04;A4ZLL3;A4ZLA9;A4LB80;A4GYN0;A4GWW2;A3R0R5;A0A5P9RPZ1;A0A6G7GCA7;A0A6B9QAI7;A0A4D6CRN8;A0A4D6CR66;A0A4D6CQV0;A0A5P8DM77;A0A5P8DNK7;A0A5P8DQC4;A0A5P9RLW2;A0A5P9RRN8;A0A6B9RB90;A0A6B7PVU8;A0A6B7GKG9;A0A650AVB0;A0A649YHJ4;A0A649YH07;A0A6B9RE80;A0A649YFA4;A0A649YEN4;A0A343L5C2;A0A343KMI0;A0A8A6WNS2;A6ZHM2;A0A6B9RC65;A0A075X6H8;A0A346M0D0;A0A346LZY5;K7WIJ6;A0A344AJ98;A0A059QQB7;A0A0Y0GJV2;A0A343HXH2;A0A343KKH2;A0A344AJ72;A0A344AJB1;A0A344AK08;A0A493QZL6;A0A346M048;A0A346LZT2;A0A0D4WP22;A0A7D5PJZ6;A0A075X6V9;A6ZGJ0;A0A343KLQ8;A0A346M067;A0A345WHV4;A0A346LZP7;A0A346LZR1;A0A343JU92;A0A3G5C665;A0A346M003;A0A343JT91;A0A343VCC6;A0A7D5PNC5;A0A344ASA8;A0A346M083;A0A3G5C3H0;A0A3G5BZV2;A0A346M0E5;A0A346M0I4;A0A3G5BZL8;G9LC49;A0A3G5AUD6;A0A3G9IUV3;A0A3G9I8L5;A0A3G9IAD1;A0A7H1D1Y8;A0A7H1D1N1;A0A7H1D1Y5;A0A7H1D1X5;A0A7H1D1L8;A0A7H1D1V1;A0A7H1D1S3;A0A7H1D1R0;A0A7H1D1Q6;A0A7H1D1N2;A0A7H1D216;A0A3G9II42;A0A7H1D1T1;A0A3G9IPY2;A0A3G9IAW8;Q14XY3;A0A098CMI8;A0A098CL94;A0A098CL77;A0A098CJX4;A0A7H1D1Z2;A0A344ARN7;A0A7H1D1K7;A0A3G9IU23;A0A3G9IWP6;A0A3G9IWZ4;A0A3G9IY71;A0A3G9IBN6;A0A6B9RB46;A0A7H1D1K9;A0A7H1D202;A0A7H1D1J7;A0A7H1D1L4;A0A7H1D1J6;A0A7H1D1M6;A0A7H1D244;A0A7H1D243;A0A7H1D236;A0A7H1D233;A0A7H1D219;A0A345ALM1;A0A1U9XM06;A0A344AJW9;A0A344AJT6;A0A344AJB6;A0A344AJC9;A0A344AJE3;A0A343T5I8;A0A343T5U2;A0A343UDR4;A0A343UFL4;A0A344AJ01;A0A343KKD9;A0A344AJ76;A0A344AJS3;A0A344AJN3;A0A344AJK7;A0A344AJJ5;A0A344AJI1;A0A344AJG9;A0A344AJF5;A0A343VBH7;A0A343V9V5;A0A344AJ38;A0A3Q9CT10;A0A343VFF5;A0A343KLK5;A0A344AK54;A0A343VDE0;A0A344AK77;A0A344AK90;A0A343KWP3;A0A343SVP1;A0A343T092;A0A344AJ14;A0A344AKF8;A0A343VFU8;A0A343VGN4;A0A343VIA6;A0A343VLY4;A0A343W521;A0A343YS70;A0A344AIY7;A0A343T203;A0A344AJQ9;A0A344AKA5;A0A344AK65;A0A411IJF3;A0A3S8PNN9;A0A411II56;A0A410RF61;A0A343KIN0;A0A410REX6;A0A410P8U3;A0A3S9JI74;A0A3S8V7Y8;A0A3S8V7R9;A0A343ID00;A0A343JYC2;A0A410REX3;A0A343JT78;A0A3G5CB78;A0A346LZV1;A0A344AKB9;A0A344AKD1;A0A343JYA9;A0A344AKE3;A0A481Y928;A0A343V6M4;A0A343JMI5;A0A3G5CCE6;A0A3G5CDK8;A0A3G5CEC5;A0A343JSI1;A0A343JS12;A0A343JRX3;A0A343JRN2;A0A482JXE7;A0A343JMJ8;A0A343JJ75;A0A343II96;A0A343IDY8;A0A3Q8A110;A0A3Q8QZL4;A0A3Q8R0B3;A0A3Q9CRH1;A0A3Q9CSM1;A0A7D5A0V6;A0A7D5A8W7;A0A7D5PG06;A0A343GRY7;A0A343GAR9;A0A343H1Z8;A0A343GW05;A0A343GUB9;A0A343GTX6;A0A343GT14;A0A343HD22;A0A343GSM1;A0A343GRT5;A0A343H5I3;A0A343GYZ5;A0A1D8MBG9;A0A343GAN0;A0A343G302;A0A343E936;A0A343E8D9;A0A343H7N7;A0A343E133;A0A343H566;A0A343H6L0;A0A343GQA2;A0A343HCH7;A0A343GM21;A0A343GLQ4;A0A343GK97;A0A343GJ31;A0A343GID4;A0A343GGA6;A0A343GG80;A0A343GFF7;A0A343GCX3;A6ZET3;A0A343GCT4;A0A343GRA3;A0A343GRE2;A0A343GRJ4;A0A343GRN3;A0A343HIA5;A0A343GG67;A0A7D5PHB7;A0A343E084;A0A343DYI6;A0A343FX73;A0A343F8H1;A0A343FJP7;A0A343FIQ9;A0A343GAF2;A0A343FIE2;A0A343FEB2;A0A343FD07;A0A343FBU1;A0A343FK27;A0A343DW54;A0A343DTF5;A0A343F577;A0A343F3Y3;A0A343FEV7;A0A1B2RCV6;A0A1B1PER3;A0A1B1PEP3;A0A059RTC0;A0A343F678;A0A343F6R0;A0A059RS84;A0A343FQV0;A0A059RRH2;A0A342YQN0;A0A342YQJ1;A0A342YML4;A0A342YGS3;A0A342YEA2;A0A342Y8N9;A0A343FU83;A0A342Y6V2;A0A342LG06;A0A342LFK0;A0A343EA37;A0A343ECE3;A0A343ED40;A0A343EF68;A0A343FXT2;A0A343FXC6;A0A342Y3K8;A0A343GPC7;A0A343GQC8;A0A097Q1W7;A0A1W6EL90;A0A1W6ER62;A0A1W6ER20;A0A1W6EPZ0;A0A1W6EPF1;A0A1W6EPE3;A0A1W6EP19;A0A1W6EN88;A0A1J0QAL9;A0A1W6EKM9;A0A1W6ERS1;A0A1W6EIQ2;A0A1W6EIK7;A0A1W5XF98;A0A1S6M7V2;A0A1S6M5A7;A0A1S5SIL8;A0A1J0QCE6;A0A1J0Q978;A0A1W6ERD6;A0A1W6ESK1;A0A343GQG7;A0A1S6NLX2;A0A1U9IH68;A0A1U9GQ16;A0A1S7C7F8;A0A1S6P8C1;A0A1S6P2C5;A0A1S6NSM3;A0A1S6NS93;A0A1S6NPW0;A0A1S6NKE4;A0A1W6HW45;A0A1S6N9W2;A0A1S6MXM6;A0A1S6MX96;A0A1V0MC94;A0A1S6MNK0;A0A1W5XF73;A0A1W5XFK8;A0A1X9MK73;A0A1W6EM52;A0A1J0Q723;A0A1L1ZBJ7;A0A1L1ZBF9;A0A1L1ZFK8;A0A1L1ZFA5;A0A1X9MMM4;A0A1L1ZF82;A0A1L1ZCN9;A0A1L1ZCA7;A0A1L1ZBP8;A0A343GQY6;A0A1L1Y114;A0A1J0Q6G1;A0A1L1XXZ8;A0A1J0QWU2;A0A1L1ZEQ1;A0A1X9Y8Y6;A0A342DH40;A0A342LF18;A0A343GR12;A0A1J0Q6T4;A0A1L1ZHH5;A0A1L2EFL1;A0A1L2EFQ3;A0A1L5YTP0;A0A1J0Q5V1;A0A1J0Q2N5;A0A1J0Q2C9;A0A1J0PTX0;A0A1J0PS43;A0A1J0PRQ1;A0A1J0PQ23;A0A1J0PQ15;A0A1J0PP53;A0A1J0PMF1;A0A1D8RFH8;A0A1J0QHC8;A0A1J0QK08;A0A1J0QLD4;A0A1J0QLK0;A0A1S5SIJ0;A0A1P8VX91;A0A059RR79;A0A059RPU4;A0A143FYL2;A0A141ZTF9;A0A0N6YMR1;A0A1B0VZK8;A0A1B0VY34;A0A167L959;A0A143FZ00;A0A143FYU0;A0A143FYN5;A0A1B0W9M1;A0A141ZRV0;A0A1B0W446;A0A1B0VYI1;A0A075C7X8;A0A0N6YMF5;A0A0K1HQC4;A0A096YAI4;A0A096Y961;A0A096Y7G3;A0A1B0W5Q2;A0A1B0W2H6;A0A1B0W6X2;A0A059RNJ2;A0A0N9Q9K1;A0A0R6NAJ0;A0A0R4RWH1;A0A0R4RTL7;A0A0R4RET0;A0A0R4QTT8;A0A0R4QGQ9;A0A0R4QEB8;A0A0R4Q8V5;A0A1B0W800;A0A0S1VVC4;A0A0N7APK3;A0A140DFM4;A0A140DII8;A0A141ZQA4;A0A141ZRP8;A0A1B1PEM5;A0A1B1PEM2;A0A0R4PX07;A0A096WX18;A0A096WTX2;A0A096W0M4;A0A0D4BLN4;A0A097Q3H9;A0A0D4BKT5;A0A0K1HR82;A0A0B5H1L7;A0A097QD97;A0A097QCA4;A0A097QB54;A0A097Q610;A0A097Q3M6;A0A0E3D7F5;A0A096VZZ3;A0A097Q1B9;A0A0A0QMI3;A0A343I8T1;A0A343H8W6;A0A5P9RM30;A0A7D5PIN8;A0A7D5PID9;A0A7D5PHG4;A0A0D4WPX0;A0A0S3CR60;A0A075C9B0;A0A096VYY1;A0A096VY74;A0A096VW93;A0A096VTP9;A0A076MLZ1;A0A075X6V4;A0A075QVS9;A0A0D4WSH3;A0A075QTM4;A0A075C8F1;A0A097PY54;A0A097PYQ8;A0A097PYS3;A0A097PZD5;A0A0G2T4D3;A0A0E3X7Q1;A0A0E3T137;A0A0S1S5W2;A0A059RP18;A0A343GSX5;A0A059S1D9;A0A068BUM1;A0A059RHL4;A0A068BQR7;A0A068BKC1;A0A060BKR4;A0A059VCQ6;A0A059S7N3;A0A023Q9F0;A0A059RXE0;A0A023Q788;A0A059RW04;A0A068BNY9;A0A068CCX5;A0A059RGC7;A0A059QSI6;A0A023QE67;A0A023QD05;A0A0S3IUU7;A0A068BUX7;A0A068BXU9;A0A068BYY3;A0A068C1D0;A0A059RNF3;A0A059RND0;A0A059RMA1;A0A059RLI7;A0A059RL82;A0A059RKH8;A0A059RJ29;A0A059RIS0;A0A059RIN6;A0A059RHU8;A0A059RTL6;A0A059RU34;A0A059RUY3;A0A059RVW3;A0A068CBC4;A0A068C9R9;A0A068C3D5;A0A023Q7H2;A0A023QTT5;A0A059QPL3;A0A059QQT5;A0A059QLQ9;A0A059QJ47;A0A059QWC2;A0A059QIY9;A0A023R5M9;A0A023QZN9;A0A023QYE6;A0A023QW19;A0A023QMV4;A0A023I989;A0A023QLJ8;A0A023QHY5;A0A059QGJ9;A0A343HN19;A0A075C7R9;A0A075C811;A0A109QFB8;A0A0X8DB89;A0A059QLY9;A0A023Q2S3;A0A059S701;A0A023I7N7;A0A023I930;A0A023I8Y9;A0A023I8R5;A0A023I8J4;A0A023I8F6;A0A023I8F1;A0A023I889;A0A059QQZ9;A0A023I7V4;A0A023I7L8;A0A023QEM9;A0A023QEV0;A0A023QFT6;A0A023QGP6;A0A059QR71;A0A059QR26;B2Z4U9;P00846 ATP6;atp6;MTATP6;ATPase 6;MT-ATP6 ATP synthase subunit a yes no 0 0 0 5 0 1 62.314 62.361 3 0.0022671 18963 20230619_1885_Aki_TMTPro18x_K_F5 92.538 70.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16340 0 15484 31079 24905 24905 1 9606 Homo sapiens 0.12195109016693095 LITVALHR Unmodified 921.57599 0.5759857 2358 B3KNM8;B4E2X3;C4B4C6;B3KNI0;Q8N6R0-1;Q8N6R0-3;Q8N6R0-4;Q8N6R0 feat;METTL13 Methyltransferase-like protein 13 yes no 0 0 0 5 0 1 46.889 46.966 3 3.9183E-14 12458 20230619_1885_Aki_TMTPro18x_K_F5 183.26 49.658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16341 2358 15485 31080 24906 24906 1 9606 Homo sapiens 0.11206074267988697 LITYLDQTTQK Unmodified 1322.7082 0.70818166 1592 Q13620-3;A0A7P0T954;Q13620;Q13620-1;K4DI93;A0A669KAX4;A0A7P0TAQ3;A0A7P0T9L3;A0A7P0T8P8;A0A7P0T9C8;A0A804CL36;A0A7P0T9D0;A0A669KBG9;A0A7P0T9P5;A0A7P0TAF9 CUL4B Cullin-4B yes no 0 0 0 1 0 1 60.579 60.579 3 0.0013765 18739 20230619_1880_Aki_TMTPro18x_K_F1 87.184 65.884 48054 34794 41050 46159 39636 53539 47541 45037 55442 51081 58824 60386 58029 53642 53036 66234 94557 69450 44349 31962 42305 45760 41598 53352 47722 46775 56142 51604 60167 60673 59098 56200 56369 66495 89897 66022 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34468000 16342 1592 15486 31081 24907 24907 1 9606 Homo sapiens 0.05973589703603466 LIVAYVDDLDRR Unmodified 1446.7831 0.78307794 1699 A0A7P0T8N8;O14776-2;O14776 TCERG1 Transcription elongation regulator 1 yes no 0 0 1 6 0.816 1 1 1 60.238 60.289 3 1.0559E-51 18246 20230619_1886_Aki_TMTPro18x_K_F6 331.73 278.6 132130 113130 134830 140540 114260 145310 136170 136410 165200 169970 142960 157120 178530 144870 150540 180020 162740 176760 122230 103780 136480 139750 121080 146330 136960 140870 165900 169600 149370 159610 179720 151760 154410 180080 155690 167870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 464420000 16343 1699 15487 31082;31083;31084 24908;24909 24909 2 9606 Homo sapiens 0.07755772234827418 LIVDAFLQQLPNCVNR Unmodified 1899.0037 0.003652175 4541 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 0 4.5 0.5 1 1 65.143 65.17 3 1.4994E-14 20235 20230619_1885_Aki_TMTPro18x_K_F5 178.67 158.29 12568 15659 9727.7 10245 12011 12172 14317 13960 11707 13793 11724 12403 12341 10654 12325 13145 16329 15385 11638 14281 10157 10842 12345 12227 14218 14128 12090 13896 12066 12591 12582 11185 12758 13291 15579 14592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32814000 16344 4541 15488 31085;31086 24910 24910 1 9606 Homo sapiens 0.0901104949996352 LIVDEAINEDNSVVSLSQPK Unmodified 2169.1165 0.11649291 3656 P55072;V9HW80;A0A7P0TAW3;A0A7P0T8Q5;A0A7P0TAQ1;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 0 4 0.816 1 1 1 62.461 62.489 3 3.4977E-08 19040 20230619_1885_Aki_TMTPro18x_K_F5 114.34 101.3 164560 151310 186480 165560 176590 180460 195300 190530 245640 179320 219650 169320 176780 155290 243560 186640 188350 247540 152450 138610 187320 166360 184600 181670 197410 193640 246030 181650 224490 172100 184940 162420 243160 190610 181160 234250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1202600000 16345 3656 15489 31087;31088;31089 24911 24911 1 9606 Homo sapiens 0.07869931916320638 LIVDHNIADYMTAK Unmodified 1602.8076 0.80757813 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 8 0 1 58.951 58.993 3 4.6528E-07 17379 20230619_1888_Aki_TMTPro18x_K_F8 136.33 116.75 198190 152630 194430 219500 199300 236270 223460 224760 246000 250470 238560 258090 266340 241660 260160 270930 260450 295370 183170 140300 198080 216300 207410 237270 224630 231110 249170 252000 246520 261040 270750 251350 264750 273140 249440 280160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 331440000 16346 1863 15490 31090 24912;24913 24913 2 9606 Homo sapiens 0.03028664326029684 LIVENLSSR Unmodified 1029.5819 0.58185893 1567;2085;393 A0A590UJK4;A0A590UK01;A0A590UJP7;Q59GY3;A8K588;A0A590UK80;Q13247-3;Q13247;V9HVZ0;B4DEM8;A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5;A0A024R6D8;Q13243-3;Q13243;Q59EK7;B4DJK0;B4DUA4 SRSF6;HEL-S-91;SFRS4;SRSF4;SFRS5;SRSF5 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 5 no no 0 0 0 7 0.816 1 1 1 50.32 50.399 2 1.8148E-08 13719 20230619_1887_Aki_TMTPro18x_K_F7 211.48 142.28 1385500 1247600 1172400 1335900 1344900 1609200 1477600 1497100 1673900 1461600 1423200 1410200 1482400 1271400 1387900 1694900 1568400 1494100 1280300 1142700 1212600 1345800 1388500 1604000 1488000 1536000 1683900 1477900 1474700 1429900 1507000 1338200 1424700 1684300 1498400 1421500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3468499999.9999995 16347 1567;2085;393 15491 31091;31092;31093 24914;24915 24914 2 9606 Homo sapiens 0.06825127988986424 LIVGTAGR Unmodified 785.47594 0.4759373 1173 J3QT28;A0A140VJF3;O43684-2;O43684;B4DDM6 BUB3 Mitotic checkpoint protein BUB3 yes no 0 0 0 2.5 0.5 1 1 42.667 42.74 2 0.0024133 11064 20230619_1881_Aki_TMTPro18x_K_F2 127.12 57.685 514090 428250 473790 533720 577970 607600 514420 496340 658540 551270 583210 545460 563400 473340 527320 615280 703250 565590 475110 392920 486480 531150 590510 606370 526780 516350 659540 554380 600760 551830 574150 498110 546980 613000 670210 538230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 429360000 16348 1173 15492 31094;31095 24916 24916 1 9606 Homo sapiens 0.0746183693418061 LIVLDPK Unmodified 796.50584 0.50584045 3951 Q16566 CAMK4 Calcium/calmodulin-dependent protein kinase type IV yes yes 0 0 0 8 0 1 57.377 57.428 2 0.064959 16756 20230619_1888_Aki_TMTPro18x_K_F8 84.244 35.74 100550 75680 90484 88889 53334 63965 76414 78153 89633 107360 101560 96397 114550 89099 79773 137400 128170 116870 92852 69424 92175 88413 59041 66920 76199 79669 91124 106560 104120 98190 114840 94723 84718 135960 122090 111260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28319000 16349 3951 15493 31096 24917 24917 1 9606 Homo sapiens 0.09944775879523604 LIVNVNDLR Unmodified 1054.6135 0.61349341 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 5.33 3.09 1 1 1 55.911 55.951 2 8.6728E-06 16082 20230619_1888_Aki_TMTPro18x_K_F8 197.3 118.18 1247300 1027600 1076300 1204900 974780 1287400 1189800 1180900 1333400 1407200 1356500 1328100 1419200 1168600 1272400 1512600 1362000 1384300 1152100 942320 1107100 1203300 1028500 1292800 1191900 1219900 1351800 1407600 1393200 1346700 1439200 1229000 1302800 1506700 1302400 1316100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 550040000 16350 1104 15494 31097;31098;31099 24918;24919 24919 2 9606 Homo sapiens 0.08837120742941806 LIWFSDK Unmodified 907.48035 0.48035398 54 A8K9U4;A0A024QZN8;Q5GLZ8-6;Q5GLZ8-3;Q5GLZ8-2;Q5GLZ8;Q9Y4U2 HERC4;DKFZp564G092 Probable E3 ubiquitin-protein ligase HERC4 yes no 0 0 0 2 0 1 62.587 62.596 2 0.039277 19789 20230619_1881_Aki_TMTPro18x_K_F2 91.065 45.753 46018 38205 43328 44982 42636 55679 50242 48476 68945 54483 50587 65177 74400 61620 52542 79475 76916 90125 42535 35034 44252 45013 44652 55308 50776 50187 68436 55116 53887 65554 74167 64646 55309 80080 73448 85440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25983000 16351 54 15495 31100 24920 24920 1 9606 Homo sapiens 0.022913013570928342 LIWGPYK Unmodified 875.49052 0.49052473 762 O94979-9;D6REX3;O94979-6;O94979-3;O94979-4;O94979-10;O94979-2;O94979;O94979-8;A0A1S5UZ19;A1LU61;A0A024RDH6;D6RHZ5;O94979-5;H0Y9T9;D6RBT0;D6RHE8;D6RE64;D6RCQ9 SEC31A;SEC31L1 Protein transport protein Sec31A yes no 0 0 0 4 0 1 60.299 60.301 2 0.012912 18450 20230619_1883_Aki_TMTPro18x_K_F4 114.67 61.201 81667 78158 73679 69289 100830 137700 93329 88012 120450 29681 25289 28815 31307 25316 46485 30329 32298 32399 75535 71466 75930 71628 102660 132870 95273 91760 117120 33323 30756 29213 32513 26507 46128 30566 31040 30751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24676000 16352 762 15496 31101 24921 24921 1 9606 Homo sapiens 0.04779909082310496 LIYFQLHR Unmodified 1088.6131 0.61309948 2263 B2R8R5;Q13263;Q13263-2 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 6 0 1 53.409 53.486 3 4.7751E-05 15406 20230619_1886_Aki_TMTPro18x_K_F6 170.73 98.587 21072 23075 18072 18979 25236 30210 28559 24291 44455 8114.5 9054.4 9427.4 10420 9054.8 14780 9268.1 11247 13030 19503 21080 18731 19668 25789 29569 29037 24800 42850 9192.1 11026 9513.5 10816 9369.4 14727 9537.5 10808 12329 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35326000 16353 2263 15497 31102 24922 24922 1 9606 Homo sapiens 0.0723374581373264 LKDDEVAQLK Unmodified 1157.6292 0.62920306 1577 P07195;Q5U077;A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 1 5.17 0.687 1 3 2 48.083 48.153 2;3;4 0.00036193 13124 20230619_1883_Aki_TMTPro18x_K_F4 114.82 61.891 1317400 978870 1085100 1080200 1231900 3006700 1228800 1140200 3763900 1275800 1288800 1727000 1705400 1421400 1066700 1969700 2169600 2347900 1215700 897480 1125800 1106000 1287400 2846700 1314200 1296700 3583900 1304100 1457900 1722100 1699600 1505800 1161800 1988500 2066500 2225400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5922499999.999999 16354 1577 15498 31103;31104;31105;31106;31107;31108 24923;24924;24925 24923 3 9606 Homo sapiens 0.05669362469302541 LKDDEVAQLKK Unmodified 1285.7242 0.72416608 1577 P07195;Q5U077;A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 2 8 0 1 46.527 46.575 3 0.0068566 12109 20230619_1888_Aki_TMTPro18x_K_F8 75.788 52.562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16355 1577 15499 31109 24926 24926 1 9606 Homo sapiens 0.09273295940488424 LKDPANFQYPAESVLAYK Unmodified 2053.052 0.052042156 2531 B4DLR8;Q53G81;P15559-3;P15559-2;P15559;Q3B792;H3BRK3;H3BNV2 NQO1 NAD(P)H dehydrogenase [quinone] 1 yes no 0 0 1 2 0 1 61.178 61.189 4 1.2267E-07 19086 20230619_1881_Aki_TMTPro18x_K_F2 120.84 103.35 69101 46571 64258 87992 93587 122330 132780 117150 132080 114970 118880 119910 124870 110440 121210 112390 121380 121290 63788 42990 66347 85793 96048 120830 131440 119980 134000 116500 122890 121160 127100 114340 123270 113460 116130 115110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 441600000 16356 2531 15500 31110 24927 24927 1 9606 Homo sapiens 0.06763821620870658 LKEEISK Unmodified 845.48583 0.48583328 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 1 6 0 1 43.739 43.831 3 0.011533 11155 20230619_1886_Aki_TMTPro18x_K_F6 90.629 10.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16357 1488 15501 31111 24928 24928 1 9606 Homo sapiens 0.05690980148915514 LKEELIDAIR Unmodified 1198.6921 0.69213767 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A8Q3WLE0;Q6ZSB8;Q6ZT55 ENAH Protein enabled homolog yes no 0 0 1 7 0 1 58.898 58.947 3 0.0096757 17342 20230619_1887_Aki_TMTPro18x_K_F7 70.412 41.064 152080 125090 137560 160940 142370 177770 161750 165330 174060 186980 178300 180150 209680 169730 175180 210710 178210 190580 140520 114810 141190 159770 148210 178140 162370 170330 176930 187590 184120 182870 211290 177610 179110 209870 170560 181180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 803870000 16358 918 15502 31112 24929 24929 1 9606 Homo sapiens 0.10073928257361331 LKEEPDREAR Unmodified 1241.6364 0.6364137 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;A0A7I2V311;A0A7I2V5F6 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 2 3 0.816 1 1 1 31.941 32.008 4 0.00071657 6366 20230619_1882_Aki_TMTPro18x_K_F3 107.18 86.794 243010 155840 261000 236630 281230 252970 254660 263230 270200 274010 319820 245290 286620 225560 281060 180470 289340 211590 224540 143460 263690 232560 289290 254860 258980 268440 276390 275440 323860 249690 293120 231120 285760 184220 276220 200930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73398000 16359 442 15503 31113;31114;31115 24930;24931 24931 2 9606 Homo sapiens 0.02526095069765688 LKEEWEK Unmodified 960.49165 0.49164694 2848 Q9UPQ0-10;Q9UPQ0;D6RD46;Q9UPQ0-2;Q9UPQ0-4;G5EA03;E9PDJ9;B7Z2J4;E7EPK0;Q9UPQ0-3;Q9UPQ0-8;Q9UPQ0-5;Q9UPQ0-6;H0Y8P3;Q9UPQ0-9;B7Z5Q8;B7Z3F1;B7Z3G0;B7Z5G6;B7Z656;B7Z7Z0 LIMCH1 LIM and calponin homology domains-containing protein 1 yes no 0 0 1 5 0 1 46.57 46.647 3 0.085869 12343 20230619_1885_Aki_TMTPro18x_K_F5 54.157 13.17 99944 82491 87219 75115 109010 124920 85712 95978 124230 101110 119900 139440 102860 100040 118570 115930 130200 136230 92323 75482 89898 77190 111030 121920 89006 100130 124130 103130 122620 138410 106370 105270 120920 117390 124500 129150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42871000 16360 2848 15504 31116 24932 24932 1 9606 Homo sapiens 0.00982078660570096 LKEEYQSLIR Unmodified 1277.698 0.69795133 4723 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 yes yes 0 0 1 8 0 1 51.337 51.414 3 0.003567 14099 20230619_1888_Aki_TMTPro18x_K_F8 73.881 51.425 292670 236480 270980 333640 343700 381690 349090 343240 373080 345000 344730 319090 343360 267980 332430 321500 277470 259680 270440 217290 278570 329370 351440 381330 352350 353370 377620 347840 354840 323430 349700 280980 335140 318870 265890 247370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237360000 16361 4723 15505 31117 24933 24933 1 9606 Homo sapiens 0.07021026769029959 LKETAESVLK Unmodified 1116.639 0.63903946 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;O14992;Q7KYN0 HSPA4;HEL-S-5a;HS24/p52;HS24/P52 Heat shock 70 kDa protein 4 yes no 0 0 1 8 0 1 52.054 52.132 3 9.3616E-05 14489 20230619_1888_Aki_TMTPro18x_K_F8 135.6 91.29 421520 433880 564110 537640 672680 560840 683460 558410 342940 595990 697190 248220 206880 115620 805410 86850 94837 64677 391490 397780 562520 534890 687580 565860 678180 571820 383230 588880 675290 263920 253600 122720 765330 88898 97399 61776 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 433550000 16362 3544 15506 31118 24934 24934 1 9606 Homo sapiens 0.08538550474713702 LKETEPVEAYVIQK Unmodified 1645.8927 0.89268797 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 1 7 0 1 54.238 54.302 3 0.0051521 15455 20230619_1887_Aki_TMTPro18x_K_F7 66.246 48.757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16363 630 15507 31119 24935 24935 1 9606 Homo sapiens 0.09557733063502383 LKGDDLQAIK Unmodified 1099.6237 0.62372375 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;D3DPI2;G3V2D6;B4DQQ2;P07910-3;G3V5V7;Q6PKD2;P0DMR1;A0A0G2JNQ3;A0A0G2JPF8;B7ZW38;B2RXH8;O60812 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL3;HNRNPCL2;HNRNPCL1 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 0 0 1 7 0.816 1 1 1 48.525 48.602 3 0.0014121 13029 20230619_1887_Aki_TMTPro18x_K_F7 93.345 59.47 148990 118680 149350 165090 153700 175320 153550 161320 213610 158150 165690 175330 185200 160190 168760 199610 184930 185720 137750 109040 151840 162980 159460 176140 156700 165710 212160 160660 173160 176750 187680 167780 172960 199100 176790 176540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5960399999.999999 16364 2226 15508 31120;31121;31122 24936 24936 1 9606 Homo sapiens 0.07789683677492576 LKGDDLQAIKK Unmodified 1227.7187 0.71868677 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;G3V2D6;B4DQQ2;P07910-3;G3V5V7 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 2 2.5 0.5 1 1 46.682 46.761 4 0.00043154 12912 20230619_1881_Aki_TMTPro18x_K_F2 107.37 61.456 2451700 2019400 2165200 1521300 834230 3763000 806520 3611300 1253100 3624400 1094000 3214700 1082000 3615200 0 2508300 1640500 1489900 2264900 1845500 2201600 1610500 996250 3624700 838950 3687200 1259700 3644100 1141800 3283600 1073800 3643300 0 2475900 1552700 1426500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 7261999999.999999 16365 2226 15509 31123;31124 24937 24937 1 9606 Homo sapiens 0.11393617148678459 LKGDVDVSGPK Unmodified 1113.603 0.60298831 3815 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 7 0 1 44.582 44.665 3 0.01288 11202 20230619_1887_Aki_TMTPro18x_K_F7 76.24 61.821 106010 74473 85085 80990 105990 122600 131450 133990 164890 148660 186610 205260 152760 144770 184170 154960 166190 154850 97779 68288 88502 81870 109260 121070 132050 136420 166790 151150 189140 203650 158540 151730 185570 155690 159100 147120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87970000 16366 3815 15510 31125 24938 24938 1 9606 Homo sapiens 0.05073093297869491 LKGEATVSFDDPPSAK Unmodified 1660.8308 0.83081599 2041 Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637-2;P35637;Q70T18 FUS RNA-binding protein FUS yes no 0 0 1 6.33 0.471 2 1 49.94 50.018 4;5 1.0179E-10 13911 20230619_1886_Aki_TMTPro18x_K_F6 151.72 129.88 234550 194730 218720 227010 231500 242670 266300 244140 237870 275020 269150 225820 245940 182110 276670 209800 211870 159000 216780 178550 223750 226880 240180 244320 265620 250160 245370 274660 273500 230000 252890 190840 276830 207820 202970 151750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1786299999.9999998 16367 2041 15511 31126;31127;31128 24939;24940 24939 2 9606 Homo sapiens 0.026833816443740943 LKHEDTNLASSTLLR Unmodified 1696.9108 0.91079765 2004 P49407;P49407-2;A8K103;H0YET9 ARRB1 Beta-arrestin-1 yes no 0 0 1 8 0 1 44.631 44.65 4 1.7245E-13 11343 20230619_1888_Aki_TMTPro18x_K_F8 170.45 0 114410 67401 128520 115930 105490 106850 114670 118870 118190 120430 117860 85095 82941 57859 126200 71898 65065 50604 105720 62174 128930 112960 111510 108970 115300 120640 120200 120490 119270 87088 87641 61380 123890 71032 62744 48343 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127590000 16368 2004 15512 31129 24941 24941 1 9606 Homo sapiens 0.09021868038212233 LKKPPTDEELK Unmodified 1296.7289 0.7289171 3032 H0Y993;P35659;B4DFG0;A0A494C028;P35659-2;B4DNW3;A0A494C198 DEK Protein DEK yes no 0 0 2 8 0 1 43.884 43.903 4 0.0022605 11045 20230619_1888_Aki_TMTPro18x_K_F8 88.087 49.068 103710 99277 135740 120550 150500 126080 143580 110480 74189 113510 153040 49659 42566 27253 169790 25898 25543 25166 96247 91020 135300 120110 154370 126850 143090 114110 82663 112490 148010 52774 52701 28888 161670 26479 25832 23912 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25995000 16369 3032 15513 31130 24942 24942 1 9606 Homo sapiens 0.09242180083265339 LKLEDFFAR Unmodified 1137.6182 0.61824444 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4;A0A8Q3WL93;A0A8Q3WLT0;A0A8Q3WL80;E7EM57;Q0PHS1;A0A8Q3WL83;E9PD92;A0A8Q3WL90;A0A2H4QGB2;A0A2H4QGB6;A7IZZ3;Q0PHS5;A0A2H4QGB8 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 1 2.5 0.5 1 1 59.975 59.995 3 0.00070107 18425 20230619_1882_Aki_TMTPro18x_K_F3 112.13 91.923 659690 542600 615150 630350 709150 842390 749460 746750 821560 875210 923770 978610 840620 729420 1100300 817420 812770 773880 609680 497520 630220 632230 730820 833460 755640 772750 837200 880560 940330 979740 872590 765020 1096800 818680 780170 735640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 442420000 16370 1464 15514 31131;31132 24943;24944 24944 2 9606 Homo sapiens 0.05494004885713366 LKLPAVVTADLR Unmodified 1294.7973 0.79727144 3563 P38117-2;P38117;M0QY67 ETFB Electron transfer flavoprotein subunit beta yes no 0 0 1 4 0 1 57.566 57.57 3 0.0020603 17310 20230619_1883_Aki_TMTPro18x_K_F4 88.224 70.899 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16371 3563 15515 31133 24945 24945 1 9606 Homo sapiens 0.16166469453787613 LKMSKLEK Oxidation (M) 991.5736 0.57360243 4782 yes no 0 1 2 2 0 1 62.734 62.743 2 0.092962 19841 20230619_1881_Aki_TMTPro18x_K_F2 44.638 12.507 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16372 4782 15516 31134 24946 24946 2909 1 9606 Homo sapiens 0.0774785774801785 LKNEIPNSHILDQYR Unmodified 1838.9639 0.96389585 3548 P35520;P35520-2;B7Z2D6;B7Z6W5;Q9NTF0 CBS;DKFZp727E011 Cystathionine beta-synthase yes no 0 0 1 1 0 1 49.743 49.743 4 7.227E-06 14247 20230619_1880_Aki_TMTPro18x_K_F1 119.04 92.92 130380 153430 194600 138760 125980 96220 145730 123710 105160 129780 138620 91826 102150 69103 235360 73744 89313 64019 121380 140230 190890 141080 136170 101440 144730 124760 110830 129550 139040 94226 111430 72383 228020 74029 86690 61002 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125000000 16373 3548 15517 31135 24947 24947 1 9606 Homo sapiens 0.07797245820893295 LKPDEGGEVPVLNVSYKPQK Unmodified 2196.179 0.17903358 3692 P61221;D6R9I9 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 0 2 2 0 1 53.648 53.676 5 2.5768E-12 16046 20230619_1881_Aki_TMTPro18x_K_F2 144.88 122.22 76432 64309 73626 72451 69748 82776 77821 80222 88597 93429 93436 94583 102980 78533 95350 101570 94694 93533 70666 58944 74965 72667 73032 82866 78364 82468 89887 93732 96069 95424 104360 82786 97090 101240 90600 88928 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123430000 16374 3692 15518 31136 24948 24948 1 9606 Homo sapiens 0.12879122775211727 LKPDPNTLCDEFK Unmodified 1575.7603 0.76029359 2776 CON__P02769 yes yes 0 0 1 6.5 0.5 1 1 54.578 54.648 3 1.2226E-06 15562 20230619_1887_Aki_TMTPro18x_K_F7 142.45 120.58 + 143400 317080 344820 155970 897760 1265700 390690 569010 1039600 365830 356440 570960 260550 381210 293400 468250 625730 1165100 135550 288470 340980 185370 878350 1179000 442950 622320 993470 388920 394830 563340 272520 404470 317280 507120 599210 1097300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 820990000 16375 2776 15519 31137;31138 24949;24950 24950 2 9606 Homo sapiens -0.004556149449399527 LKPEDITQIQPQQLVLR Unmodified 2018.1524 0.1524249 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348;A0A7I2V5T3;A0A7I2V5Z8;E7EQW5;E9PLR6;Q5T3E6 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 1 2 0 1 59.847 59.86 3 2.7911E-23 18541 20230619_1881_Aki_TMTPro18x_K_F2 195.27 152.93 174320 151080 166470 192860 167160 205610 214160 215900 228680 237760 228920 250520 234270 204900 225130 248540 231730 253920 161190 138630 169990 191480 174990 207110 213650 220420 232230 239440 235280 252110 238520 215150 229590 249310 221810 241030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1616699999.9999998 16376 1647 15520 31139 24951 24951 1 9606 Homo sapiens 0.18407478674498634 LKPGAPLRPK Unmodified 1075.6866 0.68659878 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98 FLNA Filamin-A yes no 0 0 2 7 0 1 40.167 40.232 3 0.042733 9342 20230619_1887_Aki_TMTPro18x_K_F7 55.461 38.436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16377 3484 15521 31140 24952 24952 1 9606 Homo sapiens 0.15178294256202207 LKPGDLVGVNK Unmodified 1138.671 0.67100829 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PM69;E9PKD5;E9PMD8;E9PLG2 PSMC3 26S protease regulatory subunit 6A yes no 0 0 1 2.5 0.5 1 1 50.144 50.207 3 0.0012154 14547 20230619_1881_Aki_TMTPro18x_K_F2 91.858 58.5 906330 750910 853550 972530 751460 1053600 947990 953710 1022500 1160100 1133900 1018500 1170300 906220 1028800 1264600 1138700 1050400 837720 689250 870940 964740 795770 1056300 947070 986690 1042500 1156900 1158900 1037200 1186000 957670 1056000 1252400 1087800 1000300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1109500000 16378 4761 15522 31141;31142 24953 24953 1 9606 Homo sapiens 0.10721962948514374 LKPGGVGAPSSSSPSPSPSAR Unmodified 1921.9858 0.9857535 108 B7Z6F7;A0A024R0R6;Q92797 SYMPK Symplekin yes no 0 0 1 4 0 1 40.357 40.4 3 1.3865E-11 9700 20230619_1883_Aki_TMTPro18x_K_F4 134.32 123.37 46784 30835 41308 45273 40987 50174 45808 41366 49385 56667 58794 66854 64459 54199 59375 66102 61545 69774 43165 28370 42442 44573 42781 50138 46025 43302 50523 56751 60188 66948 65356 56955 60626 66422 58922 66203 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44789000 16379 108 15523 31143 24954 24954 1 9606 Homo sapiens 0.06164005778805404 LKPGTMIEWGNNWAR Oxidation (M) 1787.8777 0.87772338 2044 A8K4I8;Q9BPW8;B4DQI7;C9JDV8 NIPSNAP1 Protein NipSnap homolog 1 yes no 0 1 1 4 0 1 53.849 53.865 3 2.2882E-07 15715 20230619_1883_Aki_TMTPro18x_K_F4 125.22 99.093 114890 113260 119580 117140 130400 129570 140730 141870 138250 138130 149660 153940 132500 129770 158770 149120 148610 161080 106410 103680 121230 118240 134700 130450 141250 143970 141430 140240 152370 154740 137120 135610 160380 150250 142380 152820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195100000 16380 2044 15524 31144 24955 24955 1286 1 9606 Homo sapiens 0.015299627145395789 LKPGTMIEWGNNWAR Unmodified 1771.8828 0.88280876 2044 A8K4I8;Q9BPW8;B4DQI7;C9JDV8 NIPSNAP1 Protein NipSnap homolog 1 yes no 0 0 1 5 0 1 58.35 58.406 3 4.8709E-14 17277 20230619_1885_Aki_TMTPro18x_K_F5 162.7 144.57 221120 220030 246460 248700 198220 236090 240820 262470 289740 290610 281510 302690 306820 288690 285100 312540 329060 353650 204940 201570 247560 248780 210980 240320 242020 267040 292160 292540 290480 306180 311540 299470 292870 315920 314590 335370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 388370000 16381 2044 15524 31145 24956 24956 1 9606 Homo sapiens 0.0277426657714841 LKPHEEPLR Unmodified 1117.6244 0.62439245 3586 P43378;Q6IQ43;H3BQT6 PTPN9 Tyrosine-protein phosphatase non-receptor type 9;Protein-tyrosine-phosphatase yes no 0 0 1 6.5 0.5 1 1 34.995 35.059 4 7.1021E-05 7630 20230619_1886_Aki_TMTPro18x_K_F6 155.06 96.14 64352 33843 74411 83018 113000 108550 95685 111960 98903 72575 106960 129830 89212 93297 101790 77254 118690 113720 59449 31423 75372 80034 113680 107830 97619 113050 100780 77187 108770 127890 92343 96516 104080 80029 113360 107650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28453000 16382 3586 15525 31146;31147 24957 24957 1 9606 Homo sapiens 0.07028523117196528 LKPHSLEPR Unmodified 1075.6138 0.61382777 529 A0A024R8N4;Q9C0B0 hCG_1776081;UNK RING finger protein unkempt homolog yes no 0 0 1 3.5 1.12 1 1 1 1 35.666 35.729 4 0.00041574 7874 20230619_1881_Aki_TMTPro18x_K_F2 129.85 93.548 826430 656600 683340 836830 709590 890380 889630 860660 1216600 1055300 1116300 1225800 1307700 1102400 964080 1376800 1307400 1239300 762950 602680 707620 830770 741560 895310 896290 886710 1216500 1061800 1158700 1232600 1312600 1155400 1007600 1370300 1247100 1178800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2318800000 16383 529 15526 31148;31149;31150;31151 24958 24958 1 9606 Homo sapiens 0.07904540462777732 LKPLEVELR Unmodified 1095.6652 0.66519463 398 A0A024R6I3;Q53GF9;P49755;B4DZH3 TMED10 Transmembrane emp24 domain-containing protein 10 yes no 0 0 1 8 0 1 51.235 51.312 2 0.037608 14080 20230619_1888_Aki_TMTPro18x_K_F8 74.173 43.603 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16384 398 15527 31152 24959 24959 1 9606 Homo sapiens 0.12118864436843069 LKPLGEAER Unmodified 1011.5713 0.57129425 2141 A8K9T8;Q9BYT8;B3KU23;E9PCB6;Q9BQD0;H0YAK4;Q96K48 NLN Neurolysin, mitochondrial yes no 0 0 1 6.5 0.5 1 1 40.687 40.766 3 0.04815 9565 20230619_1887_Aki_TMTPro18x_K_F7 54.776 27.155 535220 354870 436130 507540 578710 650770 591470 562940 722450 634790 714320 694130 753350 645570 602480 801040 749790 665390 493560 326390 453920 501580 590690 644970 599440 583100 728010 639840 734650 700740 760630 675430 624500 794380 715390 633730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 531290000 16385 2141 15528 31153;31154 24960 24960 1 9606 Homo sapiens 0.06597145334569632 LKPLGEQER Unmodified 1068.5928 0.59275797 3637 Q9BW75;Q96CV8;P52888;K7EP46;B4DU96 THOP1 Thimet oligopeptidase yes no 0 0 1 6.5 0.5 1 1 39.636 39.713 3 0.023731 9139 20230619_1887_Aki_TMTPro18x_K_F7 65.278 49.271 317320 235800 269360 308600 365260 400130 351000 360160 453090 375040 423180 396500 412260 329750 343540 430950 435150 367120 292880 216550 279310 306760 371690 396690 357800 370990 454370 379060 434810 399510 417790 347670 356060 427650 414990 349610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 331210000 16386 3637 15529 31155;31156 24961;24962 24962 2 9606 Homo sapiens 0.061205303632732466 LKPLPGETMEK Oxidation (M) 1257.6639 0.663874 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 1 1 8 0 1 45.113 45.141 3 0.043911 11546 20230619_1888_Aki_TMTPro18x_K_F8 56.951 30.41 68626 60497 60000 75523 80345 89066 77256 73975 93814 91070 98710 99995 96092 87324 91435 108280 106700 108340 63421 55496 62071 75176 81810 88693 78569 77088 94837 91420 100940 100700 97987 91572 93997 108430 101950 102890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54061000 16387 1292 15530 31157 24963 24963 815 1 9606 Homo sapiens 0.04534862285777308 LKPQYLEELPGQLK Unmodified 1654.9294 0.92940782 3483 Q6FGJ9;P21266;Q59EJ5;A4UJ43;B4E2J2 GSTM3 Glutathione S-transferase Mu 3 yes no 0 0 1 1.5 0.5 1 1 58.998 59.005 4 2.6869E-06 18176 20230619_1881_Aki_TMTPro18x_K_F2 123.02 94.722 74135 64069 66566 80191 66972 80129 85593 85182 91268 96086 93695 105710 110190 85509 97743 121930 102890 113600 68516 58778 68358 79651 70089 81131 85394 86975 92802 96784 96828 106190 111290 90814 100030 121400 98470 107950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 366890000 16388 3483 15531 31158;31159 24964 24964 1 9606 Homo sapiens 0.12814029680066596 LKPTNPAAQK Unmodified 1066.6135 0.61349341 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPX4;A0A8V8TRC7;A0A3B3ITD8;A0A024RCC4;H0YDA1;A0A8V8TRD0;A8KA17;A0A8V8TQG5;P52948-3;P52948-4;B4DWF8;A0A8V8TR23;Q86TI1 NUP98;NUP98/HOXC13 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 1 4 0 1 40.076 40.118 3 0.014703 9587 20230619_1883_Aki_TMTPro18x_K_F4 72.276 42.588 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16389 1852 15532 31160 24965 24965 1 9606 Homo sapiens 0.08285120742925756 LKPVELR Unmodified 853.53854 0.53853756 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 2 0 1 43.394 43.476 3 0.035941 11394 20230619_1881_Aki_TMTPro18x_K_F2 70.919 29.89 535750 390470 464040 513700 569700 612560 572080 578940 687040 630190 688840 660850 739300 576660 603520 745390 696300 606630 494500 358650 479240 509850 583650 611110 580210 595040 693420 635210 708530 666980 746170 606510 621960 738230 664690 577980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 778380000 16390 3758 15533 31161 24966 24966 1 9606 Homo sapiens 0.10590983002362009 LKQDGDSFR Unmodified 1064.5251 0.52507234 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 6 0 1 39.26 39.348 3 0.00021088 9249 20230619_1886_Aki_TMTPro18x_K_F6 131.82 115.59 306480 264220 315910 323850 408390 379260 399440 391560 412340 386040 442920 358270 341050 283740 453320 264940 328410 192470 283560 242360 321510 322960 415960 379770 403650 398950 420410 389540 448200 362470 356390 294070 451010 263250 314490 184080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 320810000 16391 3881 15534 31162 24967 24967 1 9606 Homo sapiens -0.004609195675357114 LKQDILDEMR Unmodified 1259.6544 0.65437195 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A8Q3WLE0;Q6ZSB8;Q6ZT55 ENAH Protein enabled homolog yes no 0 0 1 6 0 1 55.873 55.947 3 0.039751 16434 20230619_1886_Aki_TMTPro18x_K_F6 56.205 21.704 236190 184580 234990 229440 199910 263290 252230 226660 258950 267830 245070 207990 217100 164590 282300 148860 162760 149160 218330 169390 238310 228490 212130 262730 251510 235230 262940 266640 250780 212200 225250 170540 278570 150350 156790 141720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57792000 16392 918 15535 31163 24968 24968 1 9606 Homo sapiens 0.034930940002368516 LKSDEDEERVHEEL Unmodified 1726.801 0.80097243 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;H0Y827;Q96AY3-2 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 0 2 2 0.816 1 1 1 41.36 41.405 4 3.1104E-07 10681 20230619_1880_Aki_TMTPro18x_K_F1 142.32 132.22 277180 223800 249070 219370 298620 303580 318630 315390 306320 326040 352660 350070 327300 282800 384590 312090 325920 293640 256060 204920 255920 223270 306550 301040 319760 321530 314700 329530 358700 351950 337490 295410 386410 312420 312180 279220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 899980000 16393 167 15536 31164;31165;31166 24969;24970 24970 2 9606 Homo sapiens -0.03335602091647161 LKSEDEPTR Unmodified 1073.5353 0.53530267 629;445 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;A0A7P0T944;A0A7P0T9C0;B4DSC0;E7EW37;B4DRY5;A0A024R7F7;O14787-2;Q4LE60;O14787;A0A075B780;Q05D48;B3KPC8;K7ENW1;K7ESC1 TNPO1;TNPO2;TNPO2 variant protein Transportin-1;Transportin-2 no no 0 0 1 2.5 0.5 1 1 34.6 34.659 3 0.0054201 7479 20230619_1882_Aki_TMTPro18x_K_F3 77.64 69.715 218820 124320 349750 347410 548050 448180 323370 492220 290090 237100 462150 467590 253540 304540 490720 105840 361270 293410 202950 115700 347080 333480 545830 446410 338810 492520 303860 259960 457390 458410 276980 308660 485500 121430 346450 276950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 134040000 16394 629;445 15537 31167;31168 24971;24972 24972 2 9606 Homo sapiens 0.001476433670404731 LKSELVANNVTLPAGEQR Unmodified 1938.0534 0.053439139 3578;668;675 A0A024RBE7;P42167;G5E972;P42167-3;A0A024RBH7;P42167-2;Q59G12;P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 0 0 1 4.5 3.5 1 1 51.518 51.557 3 1.7463E-18 14184 20230619_1888_Aki_TMTPro18x_K_F8 174.65 158.51 151600 136550 177190 183780 204430 192830 215220 188300 124660 166110 199960 87193 87390 56161 261360 47704 49289 42389 140460 125360 178300 181820 209870 194260 213640 192150 135160 166480 196280 91254 100590 58667 249830 48492 49162 40343 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 421450000 16395 668;675;3578 15538 31169;31170 24973;24974 24974 2 9606 Homo sapiens 0.12193455709598311 LKTEGNEQMK Oxidation (M) 1192.5758 0.57578728 1650 A0A7I2V697;A0A7I2V4T9;A0A7I2V2U2;A0A7I2V5Z3;A0A7I2V588;O43765;B4DEA6;K7EMD6 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 1 1 6 0 1 36.784 36.853 3 0.057444 8287 20230619_1886_Aki_TMTPro18x_K_F6 53.528 27.409 28485 17203 51809 40344 62639 51690 47904 49621 32088 32980 55543 30621 28457 20550 68924 11202 19356 10273 26475 15947 50757 38972 63563 51359 48729 50377 34489 34121 54608 30911 31721 21051 66318 11556 18936 9800.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30683000 16396 1650 15539 31171 24975 24975 1072 1 9606 Homo sapiens -0.012797583048495653 LKTEGSDLCDR Unmodified 1292.6031 0.60306466 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 1 4 0 1 39.581 39.623 3 0.0069181 9371 20230619_1883_Aki_TMTPro18x_K_F4 59.294 41.927 94875 95903 109800 125050 192560 210160 165290 148530 233690 107310 136490 105300 92127 71891 243840 59680 82866 57038 87972 87976 111660 124900 192790 204600 170140 154880 229850 110900 142730 105890 102460 74637 235370 60648 80663 54297 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55249000 16397 3384 15540 31172 24976 24976 1 9606 Homo sapiens -0.031532747644632764 LKVPPAINQFTQALDR Unmodified 1810.0101 0.010117761 3722 P62424;Q5T8U3 RPL7A 60S ribosomal protein L7a yes no 0 0 1 5 0 1 61.687 61.735 3 6.83E-08 18604 20230619_1885_Aki_TMTPro18x_K_F5 123.4 63.526 191320 201690 223320 208870 223060 205440 257940 226900 161370 194810 181090 93685 100850 73705 253770 71682 66714 55901 177470 184590 224090 210500 231930 208710 255120 229510 170780 195340 181120 99128 112410 76719 244040 71802 65565 53302 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180580000 16398 3722 15541 31173 24977 24977 1 9606 Homo sapiens 0.13751310722955168 LKYENEVALR Unmodified 1233.6717 0.67173657 1272 P13645;CON__P13645;A0A1B0GVI3 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 1 7.5 0.5 1 1 45.428 45.485 3 0.0006008 11507 20230619_1887_Aki_TMTPro18x_K_F7 105.2 23.433 + 111690 148840 247710 286210 6388100 234360 276240 285490 526600 70286 127950 123720 135830 1057300 199180 73091 103780 95091 104720 137120 322270 276850 5932300 261210 639490 282550 514320 86431 150500 154810 147860 1003500 195450 91771 100160 90117 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 755760000 16399 1272 15542 31174;31175 24978 24978 1 9606 Homo sapiens 0.06424757597551434 LLACIASR Unmodified 902.50077 0.50077184 3707 Q5JR94;P62241;Q5JR95;Q9BS10 RPS8 40S ribosomal protein S8 yes no 0 0 0 4.5 0.5 1 1 52.335 52.384 2 0.0024133 15100 20230619_1883_Aki_TMTPro18x_K_F4 127.12 79.375 1445100 1068800 1256500 1359400 1235100 1635500 1545600 1474500 1713700 1021600 639880 644350 1031000 737860 750130 1154300 1074000 808250 1334000 981270 1292800 1352400 1295600 1628100 1544700 1505300 1692400 1046800 724250 675350 1026600 780560 787690 1132600 1022600 772320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 715250000 16400 3707 15543 31176;31177 24979;24980 24979 2 9606 Homo sapiens 0.0456214874525358 LLACIASRPGQCGR Unmodified 1557.7868 0.78679988 3707 Q5JR94;P62241;Q5JR95;Q9BS10 RPS8 40S ribosomal protein S8 yes no 0 0 1 7.5 0.5 1 1 46.26 46.323 3 7.6929E-07 11990 20230619_1888_Aki_TMTPro18x_K_F8 134.21 107.32 124230 129930 131170 101150 124430 117900 136250 133950 108100 103740 82741 67049 113350 86431 99281 118430 105270 70411 115120 118670 132360 104990 129830 118500 135870 134880 110810 105330 87368 70537 114000 90215 101620 115770 100420 67513 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1093100000 16401 3707 15544 31178;31179 24981 24981 1 9606 Homo sapiens 0.03021795465406285 LLADPTGAFGK Unmodified 1088.5866 0.58660996 3528 V9HW35;P30044-2;P30044;P30044-3;P30044-4 HEL-S-55;PRDX5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 1.5 0.5 1 1 59.927 59.933 2 1.0783E-06 18597 20230619_1881_Aki_TMTPro18x_K_F2 190.24 116.11 206700 182270 197730 209820 177580 207550 229500 228520 235010 247640 250480 256740 280400 248540 247480 303870 286550 303930 191150 167070 201410 209680 187500 210540 228610 232530 239810 249480 257630 260040 283760 259540 254710 304310 273910 288610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 659790000 16402 3528 15545 31180;31181 24982;24983 24983 2 9606 Homo sapiens 0.0458601213174461 LLADQAEAR Unmodified 985.51926 0.51925868 1679 J3QR09;J3KTE4;Q53G49;A0A7I2YQG2;P84098;Q8IWR8 RPL19 Ribosomal protein L19;60S ribosomal protein L19 yes no 0 0 0 3 0.816 1 1 1 41.774 41.835 2 0.00012018 10394 20230619_1882_Aki_TMTPro18x_K_F3 152.34 82.436 1616400 1196400 1454300 1486200 1434700 1660500 1748600 1565500 1995600 1671000 1874600 1867200 2178800 1723900 1392700 2607500 2609300 2240900 1492600 1098100 1490900 1479500 1501300 1663500 1752000 1609300 2013100 1690000 1941200 1884100 2177300 1829500 1503800 2581600 2482200 2133700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2886000000 16403 1679 15546 31182;31183;31184 24984;24985 24985 2 9606 Homo sapiens 0.025919819208070294 LLAEGHPDPDAELQR Unmodified 1659.8216 0.82164829 3611 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 2 0.816 1 1 1 45.539 45.592 3 7.4776E-09 12352 20230619_1881_Aki_TMTPro18x_K_F2 144.55 137.49 174820 154820 181490 175710 207770 233440 209670 203150 235810 193370 207040 195960 210130 164370 199420 200220 219840 203300 161780 141890 184180 176540 213810 231000 212080 209340 237500 196120 213850 197810 213790 172570 204090 200810 210030 193120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 386780000 16404 3611 15547 31185;31186;31187 24986;24987 24987 2 9606 Homo sapiens 0.018130330787016646 LLAEPVPGIK Unmodified 1035.6328 0.63283187 3689 V9HW41;P61088;F8VSD4;F8VV71;Q5JXB2;F8VZ29 HEL-S-71;UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like yes no 0 0 0 4.5 3.04 1 1 1 1 58.498 58.531 2;3 4.8134E-05 17891 20230619_1880_Aki_TMTPro18x_K_F1 164.57 122.46 419410 354810 384670 402490 355130 407570 374820 383570 424300 512280 473310 465440 533760 444810 441210 560610 465170 505120 387630 325230 393270 402730 372010 411320 378560 396950 432000 509300 485840 473980 538330 465660 452280 558060 445110 480210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1455500000 16405 3689 15548 31188;31189;31190;31191 24988;24989;24990;24991 24988 4 9606 Homo sapiens 0.11644077033838585 LLAESVTEVEIFGK Unmodified 1533.829 0.82902508 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 7 0 1 64.305 64.334 3 0.0010865 19810 20230619_1887_Aki_TMTPro18x_K_F7 79.466 66.348 42467 31513 41432 37328 31410 35442 49945 49527 46984 55507 51866 49135 63692 45951 45127 70849 57264 63651 39237 28912 42009 37234 33901 36307 49204 49768 48270 55546 53470 50112 63699 48858 47030 70307 54717 60509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51941000 16406 3881 15549 31192 24992 24992 1 9606 Homo sapiens 0.0834637262639717 LLAHEIFEK Unmodified 1098.6073 0.6073454 4212 Q8IYB8;B7Z611 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes no 0 0 0 7 0 1 53.831 53.898 3 3.0808E-07 15286 20230619_1887_Aki_TMTPro18x_K_F7 148.96 104.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16407 4212 15550 31193 24993 24993 1 9606 Homo sapiens 0.06198602511403806 LLAHPLQR Unmodified 946.57123 0.57123467 461 J3KQS6;A0A024R7L2;Q9NWV8 BABAM1;HSPC142 BRISC and BRCA1-A complex member 1 yes no 0 0 0 4 0 1 39.457 39.499 3 0.0028401 9351 20230619_1883_Aki_TMTPro18x_K_F4 89.55 58.177 17655 14592 20932 19987 22603 24843 23765 23568 25199 25508 24718 30076 33477 25203 24388 22299 25445 30060 16351 13402 21012 19805 23364 24719 23942 24215 25591 25811 25797 30123 33429 26031 25006 22901 24367 28452 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21018000 16408 461 15551 31194 24994 24994 1 9606 Homo sapiens 0.09581190125231842 LLALNSLYSPK Unmodified 1217.702 0.70197407 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5.5 0.5 1 1 62.319 62.368 3 4.5047E-05 19169 20230619_1886_Aki_TMTPro18x_K_F6 132.76 100.83 193220 223400 253670 273390 238620 246170 250460 258250 268350 231990 218740 156150 181590 144470 235950 217510 201630 143590 179590 204720 252520 271660 249040 251350 252510 262320 270330 233580 224840 161840 189020 153270 236960 213350 192850 137380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 986280000 16409 3758 15552 31195;31196 24995 24995 1 9606 Homo sapiens 0.10183116262737713 LLAPEAGSHPQQTQK Unmodified 1603.8318 0.83181904 4255 Q8NFQ8 TOR1AIP2 Torsin-1A-interacting protein 2 yes yes 0 0 0 6.5 0.5 1 1 40.396 40.463 3 2.9597999999999997E-26 9441 20230619_1887_Aki_TMTPro18x_K_F7 241.27 216.77 57414 42685 51111 54584 67061 76183 67409 60440 82572 71207 71529 73460 82751 61017 64318 92454 77595 72678 53011 39192 52714 54410 68456 75025 68375 63125 82818 71497 74393 74088 83179 65020 66616 91210 74080 69258 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64876000 16410 4255 15553 31197;31198 24996;24997 24997 2 9606 Homo sapiens 0.05405640803928691 LLAPVNCPIADFLMK Unmodified 1700.8994 0.89937002 4521 Q9H6S0;Q6ZMY0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes no 0 0 0 4 0 1 65.805 65.816 3 0.028137 20751 20230619_1883_Aki_TMTPro18x_K_F4 48.704 37.442 4200.6 2731 4421.6 3924.4 2906.6 3278.9 4848.8 5315.6 4619.5 2571.8 4134.8 3885.5 5260 2700.5 4811.5 4991.6 3694.6 4538.4 3880.9 2512.2 4448.2 3859.9 3188.9 3408.9 4771.9 5216 4689 2785.1 4314 3854.2 5297.7 2952.1 4840.2 4952.5 3551.6 4312.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6087100 16411 4521 15554 31199 24998 24998 1 9606 Homo sapiens 0.0769563141884646 LLAQDQGQGAPLLEPAP Unmodified 1716.9046 0.90464964 99 A0A024R0L6;Q15102;M0R1K3 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma yes no 0 0 0 3.5 0.5 2 2 63.185 63.203 2;3 2.4603E-18 19663 20230619_1883_Aki_TMTPro18x_K_F4 174.59 162.9 140910 110410 141710 149210 115740 135250 145990 147700 147730 169270 169760 173620 185950 156420 167840 188200 188000 197770 130260 101410 143550 147320 123110 138080 145590 150640 151390 169980 173890 175480 188400 163630 172220 189090 179750 187700 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 797680000 16412 99 15555 31200;31201;31202;31203 24999;25000;25001 25000 3 9606 Homo sapiens 0.07487349806706334 LLAQLLGTSEEDSMVGTLYDK Unmodified 2282.1352 0.13517944 4544 Q9HB07;F8VQQ3;Q96CT6;B4DE37 C12orf10 UPF0160 protein MYG1, mitochondrial yes no 0 0 0 7 0 1 66.241 66.266 3 0.049978 20611 20230619_1887_Aki_TMTPro18x_K_F7 49.973 39.339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16413 4544 15556 31204 25002 25002 1 9606 Homo sapiens 0.045397254958970734 LLAQQAGSGEFR Unmodified 1275.6571 0.65714914 1977 A6NKD9;H0YJY5;H0YJE0;G3V4C8 CCDC85C Coiled-coil domain-containing protein 85C yes no 0 0 0 7 0 1 47.949 48.037 2 1.322E-17 12679 20230619_1887_Aki_TMTPro18x_K_F7 185.29 155.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16414 1977 15557 31205 25003 25003 1 9606 Homo sapiens 0.030346854494155195 LLAQQHPPPDR Unmodified 1270.6782 0.67821894 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DQN8 PRRC2C Protein PRRC2C yes no 0 0 0 6 0 1 35.809 35.869 3 2.7028E-17 7927 20230619_1886_Aki_TMTPro18x_K_F6 189.57 159.76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16415 2894 15558 31206 25004 25004 1 9606 Homo sapiens 0.05370695548936055 LLASANLEEVTMK Oxidation (M) 1433.7436 0.74358089 3032 H0Y993;P35659;B4DFG0;A0A494C028;P35659-2;B4DNW3;A0A494C198 DEK Protein DEK yes no 0 1 0 6.5 0.5 1 1 59.383 59.438 3 2.4979E-06 17549 20230619_1887_Aki_TMTPro18x_K_F7 133.07 112.87 76057 69370 75541 78704 76518 72907 76727 74288 74999 90112 88347 84302 90297 75394 83097 96135 89659 95470 70374 63569 76791 78670 79297 74258 77337 76243 77127 90009 90082 85562 91740 79178 85063 96197 85762 90664 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 476810000 16416 3032 15559 31207;31208 25005 25005 1786 1 9606 Homo sapiens 0.04405884169068486 LLASCSADMTIK Unmodified 1308.6418 0.64175835 1628 A0A6Q8PFU3;P43034;A0A6Q8PFT2;A0A6Q8PG63;A0A6Q8PH33 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 0 4.5 3.5 1 1 56.21 56.238 3 6.419E-07 16250 20230619_1888_Aki_TMTPro18x_K_F8 146.16 115.29 143870 116230 129640 151480 125040 169640 168520 167380 185700 166480 160740 162620 172610 137050 157810 181500 179130 179660 132920 106700 133000 150290 131690 170000 167890 171120 187170 168190 166630 164430 175060 144620 162040 181500 171180 170660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73718000 16417 1628 15560 31209;31210 25006;25007 25007 2 9606 Homo sapiens -0.00021685454316866526 LLASIAEDYRK Unmodified 1277.698 0.69795133 495 Q14C86-6;Q14C86;Q14C86-2;Q14C86-5;Q14C86-4;A0A024R8A2;A0A024R862;F8W9S7;Q14C86-3;A0A024R875;B3KN67;B3KTX2 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 0 0 1 1 0 1 56.675 56.675 3 0.0006056 17115 20230619_1880_Aki_TMTPro18x_K_F1 95.498 59.539 79901 67465 69140 73701 55400 65846 71352 77092 89377 92117 85581 90533 107760 89755 78523 127330 112940 119220 73814 61819 70952 73861 59151 67457 71609 78373 89931 92238 88957 92011 107920 94602 82534 126730 107770 113300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83160000 16418 495 15561 31211 25008 25008 1 9606 Homo sapiens 0.07021026769007221 LLASLVK Unmodified 742.49528 0.49527576 2263 B2R8R5;Q13263;Q13263-2;M0R3C0 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 5 0 1 60.858 60.909 3 0.025615 18273 20230619_1885_Aki_TMTPro18x_K_F5 77.748 3.4133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16419 2263 15562 31212 25009 25009 1 9606 Homo sapiens 0.11372793225075384 LLASPSSR Unmodified 829.46577 0.46576654 2052 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;C9JZP1 NCAPH Condensin complex subunit 2 yes no 0 0 0 1.5 0.5 1 1 40.276 40.313 2 0.039745 9938 20230619_1881_Aki_TMTPro18x_K_F2 72.492 37.136 172710 117240 146720 169520 184930 209380 181440 186950 246660 143730 176270 169780 164880 144240 167890 167870 194190 153110 159330 107840 151930 167320 189200 208100 185090 191380 244400 148590 183630 170420 168880 150800 172100 167520 185260 145730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140180000 16420 2052 15563 31213;31214 25010 25010 1 9606 Homo sapiens 0.044212292089468974 LLASTLVHSVK Unmodified 1166.7023 0.70230842 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8;Q9NYF8-4;E9PJA7 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 0 4.5 0.5 1 1 53.82 53.862 3 3.6137E-06 15743 20230619_1883_Aki_TMTPro18x_K_F4 133.05 94.031 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16421 4629 15564 31215;31216 25011;25012 25011 2 9606 Homo sapiens 0.12562535982578993 LLATEQEDAAVAK Unmodified 1357.7089 0.70890994 1989 Q9P2E9;A7BI36;Q9P2E9-3;A1A5C5;A1A5C4;F8W7S5 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 3 0 1 51.659 51.724 3 8.0674E-07 14915 20230619_1882_Aki_TMTPro18x_K_F3 142.83 112.22 178180 152270 154260 153720 173630 204060 205690 198100 223960 190120 202290 204330 197880 165900 201640 199320 226360 217240 164620 139420 159030 155900 179820 202420 206030 202540 226140 193040 208430 205490 202300 174200 206320 200780 216280 206180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167670000 16422 1989 15565 31217 25013 25013 1 9606 Homo sapiens 0.04436384352652567 LLAVAATAPPDAPNREEVFDER Unmodified 2380.2023 0.20228822 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9 VCL;HEL114 Vinculin yes no 0 0 1 4 0.816 1 1 1 56.011 56.047 3 2.4474E-25 16278 20230619_1885_Aki_TMTPro18x_K_F5 194.18 171.75 26365 23463 25025 28495 32730 39097 41075 39393 41242 38515 31979 36263 38061 33989 32859 41183 37300 40075 24382 21517 25686 28502 33624 38724 40907 40185 41652 38906 33547 36828 38426 35511 33796 41184 35665 38065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209530000 16423 51 15566 31218;31219;31220 25014 25014 1 9606 Homo sapiens 0.06739516821880898 LLCEELK Unmodified 903.47355 0.47355404 49 G5EA31;A0A024QZM6;P53992;B4DSN3 SEC24C Protein transport protein Sec24C yes no 0 0 0 4.33 0.471 2 1 53.005 53.043 2 0.02183 14912 20230619_1885_Aki_TMTPro18x_K_F5 102.72 0 288590 228280 252290 279290 267730 316850 325520 315230 389550 343860 305190 300710 345740 266740 283670 382070 344080 339960 266520 209450 259760 278360 278750 317460 326710 322880 389870 344770 318790 306200 348550 282490 293420 379420 328600 323360 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 298000000 16424 49 15567 31221;31222;31223 25015;25016 25016 2 9606 Homo sapiens 0.01795620414225141 LLCEHFR Unmodified 973.48037 0.48037075 71 A0A024QZY1;Q13155;B2R7M3;Q13155-2;A8MU58 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes no 0 0 0 7.5 0.5 1 1 42.356 42.395 3 0.00022346 10232 20230619_1887_Aki_TMTPro18x_K_F7 178.65 132.22 317330 252110 266070 282540 308110 329020 320940 312980 376910 209680 182020 138670 172810 122150 211840 226140 200500 112230 292980 231120 275270 283530 317160 328880 324410 318080 372590 215600 195340 143800 178460 132040 214150 219190 191340 108120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 379820000 16425 71 15568 31224;31225 25017;25018 25017 2 9606 Homo sapiens -0.007430219145589945 LLCGGER Unmodified 803.39597 0.39597242 1437 A0A384MTJ7;P30837;B4DLJ0 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes no 0 0 0 5 0 1 39.146 39.238 2 0.055778 9197 20230619_1885_Aki_TMTPro18x_K_F5 83.614 45.376 83969 53775 74256 75554 98293 92841 87779 90627 106520 88890 108510 110330 111090 93527 97909 90644 137530 112500 77464 49457 76586 74729 99840 92536 89701 92676 107480 90609 111350 110440 112700 96902 101920 92395 131030 106720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51310000 16426 1437 15569 31226 25019 25019 1 9606 Homo sapiens -0.013589727313046751 LLCGGGIAADR Unmodified 1101.5601 0.56007764 1475 P05091;A0A384NPN7;Q53FB6;P05091-2;B4YAH7;S4R3S4 ALDH2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 6.5 0.5 1 1 47.61 47.698 2 2.0535E-11 12898 20230619_1886_Aki_TMTPro18x_K_F6 173.39 134.62 244470 204430 225220 219720 245120 302360 290720 278610 301010 294610 360080 414190 322660 319560 382440 331120 399160 439930 225940 187300 230740 221830 254510 298900 290800 286700 308270 300480 365550 411620 333640 333240 388480 338820 382030 416540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 426380000 16427 1475 15570 31227;31228 25020;25021 25020 2 9606 Homo sapiens 0.013359999687509116 LLCGLLAER Unmodified 1043.5798 0.57975045 3115 I4AY87;P14174 MIF Macrophage migration inhibitory factor yes no 0 0 0 1.5 0.5 1 1 61.351 61.356 2 2.2493E-05 19025 20230619_1880_Aki_TMTPro18x_K_F1 168.23 112.52 5149100 4266400 4742300 4733500 4264700 6187400 4438700 4788400 13736000 3998800 3273900 3620200 3471500 3307700 5001900 4096900 4107900 3239100 4758500 3910200 4845000 4761700 4506000 6111200 4743400 4966200 13017000 4097500 3861500 3681300 3617200 3461300 5004600 4060000 3933000 3088800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11906000000 16428 3115 15571 31229;31230 25022;25023 25022 2 9606 Homo sapiens 0.059703759795411315 LLDAESEDRPK Unmodified 1271.6357 0.635745 3350 Q59HG1;O95239;O95239-2;B4DYE2;Q2VIQ3;B3KNC0 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 0 1 2.5 0.5 1 1 43.433 43.509 3 0.00040741 11151 20230619_1882_Aki_TMTPro18x_K_F3 102.62 67.207 118660 86928 111070 115440 124420 144240 142090 125930 159140 137820 163980 144270 181530 135540 115500 162180 176560 144770 109590 79851 113710 114590 128730 143220 142720 130270 161260 138920 168550 146000 181490 141570 122220 161450 168120 137800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121800000 16429 3350 15572 31231;31232 25024 25024 1 9606 Homo sapiens 0.010792556300202705 LLDDLFR Unmodified 890.48617 0.48616764 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3;Q69YJ6;G3V3B0;Q9UKV3-3;Q9UKV3-2 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus yes no 0 0 0 7 0 1 63.437 63.469 2 0.022597 19426 20230619_1887_Aki_TMTPro18x_K_F7 101.69 62.872 444560 390920 389950 467400 366240 471780 473430 433550 527530 595540 528440 483970 539030 505950 526450 606710 576840 655430 410840 358460 400900 465730 385850 475790 472720 450000 534820 589840 542380 497220 549590 526540 538810 610530 551970 621730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 506540000 16430 2896 15573 31233 25025 25025 1 9606 Homo sapiens 0.03654399868753444 LLDEAIQAVK Unmodified 1098.6285 0.62847478 4389 Q96QK1;Q53FR4;I3L4S0;A0A1W2PP10;A0A3B3ITD4 VPS35 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 7 0 1 62.834 62.87 3 0.0029519 19133 20230619_1887_Aki_TMTPro18x_K_F7 77.677 48.951 0 40889 62761 34011 35993 0 31231 26749 0 44026 53583 48766 80262 40763 32980 54180 28509 50413 0 37251 57898 34603 38806 0 30940 25992 0 43578 53541 49047 78570 43141 34246 53955 27472 47842 0 1 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1 1054699999.9999999 16431 4389 15574 31234 25026 25026 1 9606 Homo sapiens 0.08310567820262804 LLDEDEIR Unmodified 1001.5029 0.50293991 2579 B4DRS4;O43719;Q5H919;Q5H918 HTATSF1 HIV Tat-specific factor 1 yes no 0 0 0 1 0 1 49.636 49.636 2 6.825E-05 14184 20230619_1880_Aki_TMTPro18x_K_F1 184.89 113.75 227310 179880 188050 228170 241980 292190 258140 255960 295350 268640 290930 271970 296460 254020 243820 323570 324560 311800 209840 165100 195410 227200 247840 289680 260420 264290 298540 271020 298760 275540 299990 266280 253750 323140 309670 296320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 649930000 16432 2579 15575 31235 25027 25027 1 9606 Homo sapiens 0.002248559640520398 LLDEEEATDNDLR Unmodified 1531.7002 0.70019575 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B4DHD2;B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 1 0 1 51.382 51.382 2 6.4875E-57 14920 20230619_1880_Aki_TMTPro18x_K_F1 336.31 294.44 163220 122230 126450 144490 134320 167580 149450 146470 157890 187580 183010 193160 206250 167620 179130 240040 240020 224780 150570 112130 131760 144380 139540 167200 150100 152200 161560 187490 187670 195020 208490 177590 186320 239000 228960 213710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188030000 16433 3981 15576 31236 25028 25028 1 9606 Homo sapiens -0.044386340744722474 LLDEEISR Unmodified 973.50803 0.50802529 4388 Q96PU8-5;Q96PU8-9;Q96PU8-8;Q96PU8-6;Q96PU8-3;Q96PU8 QKI Protein quaking yes no 0 0 0 1.5 0.5 1 1 49.164 49.229 2 0.0017114 14046 20230619_1880_Aki_TMTPro18x_K_F1 114.28 29.806 106740 69036 95881 99655 127300 135200 118300 117160 140640 130700 101280 120210 153900 113940 115100 144250 142060 136560 98483 63510 98793 98548 129510 133580 120450 121260 140590 131100 108180 122250 153490 119430 119360 143950 135630 129810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156090000 16434 4388 15577 31237;31238 25029;25030 25029 2 9606 Homo sapiens 0.020211598266769215 LLDEVFFSEK Unmodified 1225.6231 0.62305505 3505 P25789;H0YMZ1;H0YN18;H0YL69;H0YMA1;H0YKT8;H0YMI6;H0YLC2;H0YLS6 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type;Proteasome subunit beta type yes no 0 0 0 5.25 0.829 1 1 2 64.16 64.196 2;3 0.0018276 20022 20230619_1886_Aki_TMTPro18x_K_F6 86.898 71.459 93363 67926 86449 97498 85332 100570 87419 90389 222320 101490 93387 99684 113950 95910 97653 120870 109440 113930 86218 62452 88440 96026 89144 101190 92065 93354 213330 102250 102750 101160 114950 100380 100370 120610 104630 108270 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 656490000 16435 3505 15578 31239;31240;31241;31242 25031;25032;25033 25033 3 9606 Homo sapiens 0.019268442378233885 LLDFGSLSNLQVTQPTVGMNFK Oxidation (M) 2424.2359 0.23589654 3066 H3BNC9;P08708 RPS17 40S ribosomal protein S17 yes no 0 1 0 3.5 0.5 1 1 64.456 64.476 3 2.8557E-17 20197 20230619_1883_Aki_TMTPro18x_K_F4 157.97 144.1 21368 20204 20566 24260 27866 22732 21509 23847 21374 24832 30982 30045 31071 23063 21948 29893 28482 30770 19772 18522 21076 24148 28131 23155 22072 24314 22183 25184 31320 30041 31250 24394 22885 29955 27204 29208 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 371210000 16436 3066 15579 31243;31244 25034 25034 1790 1 9606 Homo sapiens 0.08074802269402426 LLDFGSLSNLQVTQPTVGMNFK Unmodified 2408.241 0.24098191 3066 H3BNC9;P08708 RPS17 40S ribosomal protein S17 yes no 0 0 0 4.5 0.5 1 1 65.215 65.242 3 9.243099999999999E-38 20289 20230619_1885_Aki_TMTPro18x_K_F5 231.21 216.94 37223 27011 32007 34536 27358 37375 35366 35760 35060 46205 41087 45267 47507 37056 40631 46338 45174 48313 34355 24803 32902 34295 29062 37522 35201 36920 36036 46081 42182 45691 47931 39008 41720 46510 43200 45855 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 234780000 16437 3066 15579 31245;31246 25035;25036 25036 2 9606 Homo sapiens 0.0931910613198852 LLDFYNCTER Unmodified 1329.6023 0.60233638 1262 B3KY33;A0A1C7CYY6;A0A1B0GTX1;Q6XZF7-2;Q6XZF7;B4E0Q3;A0A2X0U4N6 DNMBP Dynamin-binding protein yes no 0 0 0 6 0 1 58.771 58.836 2 0.052908 17665 20230619_1886_Aki_TMTPro18x_K_F6 79.311 66.355 30538 24883 33509 31250 31753 32839 30007 29295 36148 40160 43910 40936 48711 38401 35847 44116 45081 46130 28260 22834 33744 31063 33057 33016 30571 30469 36813 40030 44858 41447 48930 40017 37232 44330 43051 43789 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12514000 16438 1262 15580 31247 25037 25037 1 9606 Homo sapiens -0.0492806941354047 LLDGAFK Unmodified 762.42759 0.42759012 1818 Q7Z460;Q7Z460-3;Q7Z460-5;Q7Z460-4;Q7Z460-2;A0A8V8TLP7;F8WA11;A0A8V8TQK9;A0A8V8TRF6;H0Y5T1;B7Z4E5;B7Z7Q8;B7Z5R7;C9J151 CLASP1 CLIP-associating protein 1 yes no 0 0 0 8 0 1 56.876 56.933 2 0.06574 16522 20230619_1888_Aki_TMTPro18x_K_F8 79.116 46.646 321570 247820 250900 307860 243740 334630 274150 273440 471300 411060 438780 508890 537920 566200 322890 996030 255970 772770 296700 227430 261050 306200 255680 334810 280690 287360 467550 411500 456150 515220 536300 603920 332490 979270 249140 734450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68654000 16439 1818 15581 31248 25038 25038 1 9606 Homo sapiens 0.03687343294279799 LLDGPSTEK Unmodified 958.49713 0.49712625 1319 P23193;A0A384MTX4;A0A1W2PPZ5;B7Z4W0;P23193-2;A0A1W2PRL9;E5RIS7 TCEA1 Transcription elongation factor A protein 1 yes no 0 0 0 3.33 0.471 2 1 47.514 47.574 2 7.791E-05 13072 20230619_1882_Aki_TMTPro18x_K_F3 128.36 45.69 142430 119760 120870 155530 193790 161090 156390 144170 219300 185760 218960 232040 234390 213210 161970 251960 288040 255780 131560 109920 125810 154120 194270 162240 161720 149660 219770 187050 225300 232870 235530 222510 173410 252520 274160 243020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255370000 16440 1319 15582 31249;31250;31251 25039;25040 25039 2 9606 Homo sapiens 0.01621757452392103 LLDHDNVK Unmodified 952.49779 0.49779495 1624 Q8TB36;Q8TB36-2;A0A6Q8PGS2;A0A6Q8PGL3;B4DIH2;A0A6Q8PH79;A0A6Q8PFG4;A0A7I2RYU0;A0A6Q8PEZ4;A0A6Q8PHN7;A0A6Q8PH88;A0A6Q8PEX8;A0A6Q8PH97;A0A6Q8PGU0;A0A6Q8PHC1;A0A6Q8PGQ9 GDAP1 Ganglioside-induced differentiation-associated protein 1 yes no 0 0 0 4 0 1 41.568 41.611 3 0.00071976 10229 20230619_1883_Aki_TMTPro18x_K_F4 128.36 74.528 520110 374110 538360 489690 462810 431970 550000 509290 593410 545990 737950 670960 616680 553910 604950 529980 795190 712530 480710 343620 543830 484530 488320 443180 551080 516220 607200 553580 744560 671610 632980 574050 625380 543470 758420 675130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187700000 16441 1624 15583 31252 25041 25041 1 9606 Homo sapiens 0.019645968920940504 LLDHMQNTPGFMYK 2 Oxidation (M) 1725.7855 0.78546248 4606 Q9NVP1;Q4ZG72;Q8N254 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 2 0 1 0 1 49.298 49.298 3 0.017206 14070 20230619_1880_Aki_TMTPro18x_K_F1 54.598 47.934 38029 29309 35421 34088 46208 38851 38478 37224 42390 33097 32752 31868 35431 27613 36060 34902 34836 32976 35131 26881 36333 34109 46848 38926 39364 38033 42577 33649 34180 32275 36092 29020 36582 34854 33330 31348 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52082000 16442 4606 15584 31253 25042 25042 2826;2827 1 9606 Homo sapiens -0.04839883414024371 LLDIACWIHHK Unmodified 1404.7336 0.73362533 1270 F8W787;A0A1B0GW44;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;V9HWI3;C9JH19;P07339;A0A1B0GVP3;A0A1B0GU92;A0A1B0GU03;F8WD96 CTSD;HEL-S-130P Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 0 0 0 4 0 1 60.98 60.984 4 0.00010125 18709 20230619_1883_Aki_TMTPro18x_K_F4 125.74 93.732 68873 59107 71060 80814 74690 99676 97259 96931 124430 88847 71583 79688 77901 70411 84958 83888 74322 96179 63721 54279 72161 80050 78061 99222 97527 98974 123040 90020 76292 80960 79685 73668 85683 84772 71365 91141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1050099999.9999999 16443 1270 15585 31254 25043 25043 1 9606 Homo sapiens 0.04744785745037916 LLDIEGLYSK Unmodified 1149.6281 0.62814043 4301 Q92621;B4DE72;Q6P486;Q6DKH1;Q4VBX7 NUP205 Nuclear pore complex protein Nup205 yes no 0 0 0 7 0 1 62.973 63.005 3 0.0093243 19192 20230619_1887_Aki_TMTPro18x_K_F7 69.01 50.28 49231 39197 43512 48896 36561 49881 45757 48720 57451 60369 55624 54493 68288 57197 50268 74802 63035 70280 45471 35970 44615 48593 38882 50316 45982 50156 57831 60217 57682 55712 68443 59850 52276 74555 60238 66774 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126050000 16444 4301 15586 31255 25044 25044 1 9606 Homo sapiens 0.05931148100444261 LLDIVAR Unmodified 798.49634 0.49633839 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 8 0 1 57.017 57.068 2 0.052122 16601 20230619_1888_Aki_TMTPro18x_K_F8 85.265 18.272 285650 238680 234850 283410 245940 276610 268910 264030 321220 323120 323690 353010 365360 315510 296850 422390 358920 451690 263780 218880 243250 282430 255440 279990 271430 272280 324500 324320 333950 355810 368410 332370 307230 423950 343450 428360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 509270000 16445 1211 15587 31256 25045 25045 1 9606 Homo sapiens 0.08903007593994516 LLDLVQQSCNYK Unmodified 1479.7392 0.73916421 1527 A0A3B3IUA2;Q6FHM6;B1AHD1;P55769 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 0 0 0 2 0 2 62.028 62.038 2;3 3.0837E-13 19553 20230619_1881_Aki_TMTPro18x_K_F2 181.62 155.11 96599 89899 97413 114580 91698 128130 122000 121200 136060 148660 122780 143190 175810 148940 107480 190510 149160 199300 89405 82470 98959 113840 96720 128300 121680 125020 137440 148610 128990 145800 174540 155680 113270 190990 142660 189020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 498240000 16446 1527 15588 31257;31258 25046;25047 25047 2 9606 Homo sapiens 0.01848419746215768 LLDMDGIIVEK Oxidation (M) 1260.6635 0.66353965 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 1 0 4 0.816 1 1 1 59.573 59.601 2 0.07816 18181 20230619_1883_Aki_TMTPro18x_K_F4 54.608 32.46 31037 28685 37146 38647 35192 33320 34276 35671 39044 44153 44876 42784 43207 33143 42847 48124 45790 54129 28769 26331 37194 38141 36628 34166 34790 36513 39769 44106 45685 43181 44109 35330 43772 48431 43841 51318 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178700000 16447 3152 15589 31259;31260;31261 25048 25048 1833 1 9606 Homo sapiens 0.043634425659320186 LLDPEDISVDHPDEK Unmodified 1720.8156 0.81555986 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 2 0.816 1 1 1 54.413 54.436 3 8.399599999999999E-19 16345 20230619_1881_Aki_TMTPro18x_K_F2 202.01 161.46 131590 111080 135130 138410 126010 152800 163100 154000 139320 159360 207930 211410 171080 145750 248480 169600 179830 210960 121730 101910 136900 137750 132600 153410 161630 157440 145960 162230 208700 210010 179330 153790 247090 172620 172940 199820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 245900000 16448 2337;3778;3779 15590 31262;31263;31264 25049;25050 25050 2 9606 Homo sapiens -0.016015299434684493 LLDPEDVDVPQPDEK Unmodified 1707.8203 0.82031089 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1 PLEC Plectin yes no 0 0 0 2.5 0.5 1 1 59.817 59.837 3 0.021485 18378 20230619_1882_Aki_TMTPro18x_K_F3 54.598 39.722 19797 14381 19607 21228 20615 26104 22922 27621 33795 28074 27324 34288 37919 35324 24581 45808 36473 48289 18291 13227 19963 20934 21442 26041 23318 28106 33552 28554 28832 34575 37768 36945 26009 45932 34864 45795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104820000 16449 3921 15591 31265;31266 25051 25051 1 9606 Homo sapiens -0.005286458007049077 LLDPIREK Unmodified 982.58113 0.58113065 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 1 7.5 0.5 1 1 48.067 48.14 3 0.066548 12737 20230619_1888_Aki_TMTPro18x_K_F8 53.493 21.733 809660 666900 726720 789590 721730 720940 766450 779970 853480 811630 933450 1019600 934960 730240 963050 1062700 1012700 1023500 748070 611600 745270 786630 750920 735950 773230 793880 867570 824620 954810 1016000 955100 780400 982110 1060000 968580 972540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 755540000 16450 1102 15592 31267;31268 25052 25052 1 9606 Homo sapiens 0.08914333339942004 LLDPTSSR Unmodified 887.47125 0.47124585 1401 Q13724;A0A384MDR6;Q58F09;Q13724-2;A0A3B3IRK6;A0A3B3IRW2;A8K9K4 MOGS;GCS1 Mannosyl-oligosaccharide glucosidase yes no 0 0 0 5.5 0.5 1 1 43.712 43.798 2 0.002215 11133 20230619_1886_Aki_TMTPro18x_K_F6 130.27 101.12 82617 61552 75392 80304 88358 99198 87373 83195 115530 81724 104190 109260 107020 91019 100930 118760 124540 119780 76295 56526 77413 79783 90805 98494 89003 86087 115520 83595 107580 109120 108880 95933 104130 118900 118900 113770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85209000 16451 1401 15593 31269;31270 25053 25053 1 9606 Homo sapiens 0.023009080007682314 LLDQHDQR Unmodified 1023.5098 0.50975662 3520 P29084;E5RH41 GTF2E2 Transcription initiation factor IIE subunit beta yes no 0 0 0 2.5 0.5 1 1 33.349 33.41 3 0.00032156 6929 20230619_1882_Aki_TMTPro18x_K_F3 148.14 73.035 103890 97743 114180 122990 151560 169650 133190 137300 154340 125820 149070 150070 138960 123770 151350 115030 214030 154470 96235 89650 115750 122700 153990 167250 136020 142170 155750 128580 152800 150310 142860 128100 156910 118070 203760 146520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86093000 16452 3520 15594 31271;31272 25054;25055 25054 2 9606 Homo sapiens -0.001057863647247359 LLDQIVEK Unmodified 956.55425 0.5542472 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 6 0 1 59.953 60.015 3 0.068021 18149 20230619_1886_Aki_TMTPro18x_K_F6 46.129 21.353 54658 48898 55148 56317 52714 62867 65351 68991 79662 74001 82719 77061 78351 66617 71248 82293 73211 82825 50574 44818 55964 56378 55336 63210 65614 70169 80429 74612 84487 77775 79759 69892 72751 82443 70096 78627 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24093000 16453 2644;4322 15595 31273 25056 25056 1 9606 Homo sapiens 0.07423224728768218 LLDQQNPDEDFS Unmodified 1419.6154 0.61540349 1078 L7RT18;A0A0S2Z3Q4;P46108 CRK Adapter molecule crk yes no 0 0 0 1 0 1 59.32 59.32 2 0.00047305 18233 20230619_1880_Aki_TMTPro18x_K_F1 106.68 100.09 26316 22403 24858 28401 25581 27048 30709 25769 30450 30430 28270 27896 36205 26878 28589 37517 35734 38248 24329 20557 25407 28167 26636 27430 30646 26560 30966 30432 29452 28416 36319 28347 29649 37539 34138 36311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27205000 16454 1078 15596 31274 25057 25057 1 9606 Homo sapiens -0.07761959820436459 LLDRDACDTVR Unmodified 1332.6456 0.64559818 4634 Q9NZL4;Q9NZL4-3;Q9NZL4-2;K7EL16;A0A024R4R7;K7EN20 HSPBP1 Hsp70-binding protein 1 yes no 0 0 1 3 0 1 39.91 39.966 3 0.00055421 9586 20230619_1882_Aki_TMTPro18x_K_F3 96.604 72.223 108760 83327 92213 107290 106930 121590 111900 113200 146330 120300 124560 117290 124860 101930 113770 140420 132950 126460 100400 76504 95367 106540 110160 121660 113570 116410 146190 121170 128780 118760 126900 107680 117090 139630 126980 120280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60195000 16455 4634 15597 31275 25058 25058 1 9606 Homo sapiens -0.007418796362571811 LLDSITVPVAR Unmodified 1182.6972 0.69722304 1129 O00203;O00203-3;A0A0S2Z5J4;A8K586;A0A8Q3WKJ9;A0A8Q3WL34;A0A8Q3SIS1;A0A8Q3SHS3;A0A8Q3WKK0;A0A8Q3SHW6;A0A8Q3SHR2;A0A8Q3SI03;A0A8Q3WKN2;A0A8Q3SIM7;A0A8Q3WKF8;A0A8Q3SHU2;A0A0S2Z4Z4;A0A8Q3WKI5;Q3MNE1;A0A8Q3SHP3;B4E0B2 AP3B1 AP-3 complex subunit beta-1;AP-3 complex subunit beta yes no 0 0 0 2 0 1 60.939 60.949 2 0.0088559 19016 20230619_1881_Aki_TMTPro18x_K_F2 76.228 41.128 43830 30919 36788 45956 44232 49031 49027 51718 61353 49292 47535 43822 56662 44896 46987 57838 50841 51902 40439 28443 38128 45190 45520 49387 49520 52572 61235 49806 49789 44814 57066 46975 48223 57550 48614 49356 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41204000 16456 1129 15598 31276 25059 25059 1 9606 Homo sapiens 0.11318232119992899 LLDSLEPPGEPGPSTNIPENDTVDGR Unmodified 2718.2984 0.29843303 1631 Q92734;Q92734-2;A0A6Q8PFY7;Q7Z426;Q92734-3;A0A6Q8PG04;A0A6Q8PF40;Q05BK6;Q7Z427;A0A6Q8PGS4;Q8TDJ5;A0A6Q8PG00;A0A6Q8PH27;A0A6Q8PH89;A0A6Q8PFC4;Q92734-4;C9JJP5;C9JUE0 TFG;TFG/ALK fusion Protein TFG;Tyrosine-protein kinase receptor yes no 0 0 0 3 0 1 61.832 61.862 3 0.006311 19104 20230619_1882_Aki_TMTPro18x_K_F3 56.468 47.644 23407 19034 18293 23984 27105 37619 25064 29089 41739 22334 19464 25142 27825 21477 22523 34942 30284 36496 21604 17468 19185 23974 27512 36781 25885 30106 40646 23068 21417 25287 27891 22999 23495 34938 28944 34625 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60785000 16457 1631 15599 31277 25060 25060 1 9606 Homo sapiens 0.008015750805952848 LLDSLEPPGEPGPSTNIPENDTVDGREEK Unmodified 3104.4786 0.47858224 1631 Q92734;Q92734-2;A0A6Q8PFY7;Q7Z426;Q92734-3;A0A6Q8PG04;A0A6Q8PF40;Q05BK6;Q7Z427;A0A6Q8PGS4;Q8TDJ5;A0A6Q8PG00;A0A6Q8PH27;A0A6Q8PH89;A0A6Q8PFC4;Q92734-4;C9JJP5;C9JUE0 TFG;TFG/ALK fusion Protein TFG;Tyrosine-protein kinase receptor yes no 0 0 1 3.5 0.5 1 1 58.504 58.52 4 3.7583999999999994E-21 17773 20230619_1882_Aki_TMTPro18x_K_F3 166.23 149.01 26200 25479 24401 25780 20754 23130 22611 24933 25996 31567 29167 26720 32574 27814 28217 35792 29845 28449 24241 23321 24887 25995 21907 23650 22817 25520 26453 31391 29907 27400 32929 29070 28901 35409 28530 27104 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173620000 16458 1631 15600 31278;31279 25061 25061 1 9606 Homo sapiens 0.01052209226963896 LLDSSTVTHLFK Unmodified 1359.7398 0.73981614 1226 G3V295;A0A140VK44;G3V5Z7;P60900;P60900-2;G3V3I1;G3V3U4;Q9BZ93 PSMA6 Proteasome subunit alpha type;Proteasome subunit alpha type-6 yes no 0 0 0 3 0 1 60.742 60.771 3 8.8098E-10 18736 20230619_1882_Aki_TMTPro18x_K_F3 176.51 133.42 62140 54899 65213 74608 57361 76936 69926 66772 180850 62484 51238 55853 66327 55717 59168 59388 61939 67850 57512 50405 65947 73723 60877 77338 73061 68832 172400 63488 59314 56974 66941 57703 60445 60097 59277 64333 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33396000 16459 1226 15601 31280 25062 25062 1 9606 Homo sapiens 0.07433582457542798 LLDSVPPTAISHFK Unmodified 1523.8348 0.83477916 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 2 0 1 58.075 58.09 3 1.2615E-11 17806 20230619_1881_Aki_TMTPro18x_K_F2 172.57 147.25 111590 79116 103140 110080 87816 113750 110210 86948 96013 120860 111570 121530 138410 108600 113840 167630 131950 161970 103040 72723 105300 108630 93126 114080 109390 91692 99388 120330 114990 122960 139200 115610 117510 166990 126280 153790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 713300000 16460 1748 15602 31281 25063 25063 1 9606 Homo sapiens 0.09381515928726003 LLDVDNR Unmodified 843.44503 0.4450311 1057 A0A0P0C1B5;Q4GCC3;W8DBX9;A0A345WIR4;A0A343GID2;A0A343GG78;A0A343GUB7;A0A059RJF0;A0A059RKP1;A0A059RIQ8;A0A7T4WPY7;A0A342Y881;A0A059R1T0;A0A345ALL9;A0A343GQG5;A0A343YTG0;A0A343YSM3;A0A343YS86;A0A343VHA3;A0A343VD86;A0A343VB45;A0A343V3Y6;A0A059RQ10;A0A343GQY4;A0A059RX67;A0A059RLH3;G9LG51;G9LB98;I2E7Z7;G8JE99;A0A343R0H2;A0A343R0G0;G8JF18;A0A343LIL8;A0A059RKX5;A0A059RNF8;A0A343GRT3;A0A343L1C9;A0A343H8S5;A0A059RIZ2;A0A343H8N6;A0A343H6K8;A0A343GTX4;A0A059RNV8;A0A343GT12;A0A059RPV8;A0A343UGE8;A0A343UE68;A0A343UAQ9;A0A143FZ56;A0A1J0QNY7;A0A1J0QL53;A0A1J0PNZ2;A0A1I9S095;A0A0R6NEC0;A0A1B1PEN9;A0A1B0W3A7;F1AZF2;A0A1B0W1P0;A0A0D4WSL8;A0A343SU82;A0A1B0W0T5;A0A0D4WR75;A0A342YMQ1;A0A343FXU3;A0A343FX71;A0A059RR09;A0A059RRG1;A0A059RSL1;A0A059RTZ6;A0A1L7NY43;A0A0N6YNR7;A0A1S6M799;A0A1V0MCS7;A0A059RFY4;A0A343SEV6;A0A343RU73;A0A343R0N9;A0A059RHR2;A0A059RHY7;A0A059RI53;A0A343GG65;A0A343GFQ9;A0A343GB60;A0A059RQT0;A0A0E3JG40;A0A342Y6A5;A0A342YA83;A0A342Y5A4;A0A059RVU8;A0A342DHX4;A0A0E3JSF1;A0A1W6ER68;Q305H0;P00403;Q0Z7J0;W8DFH5;U3L556;U5Z487;Q5SB08;H9T3W9;H9SA70;X5C6M5;X5BKA4;X2CK15;X2C841;W8D4U9;I6N6Q6;W8D1X2;V9K571;V9JPM6;V9JD22;V9J3S1;U5Z9R9;U3LSI8;Q5SAP1;Q5SA98;T1SWS8;Q6R0V6;Q6RKW8;Q6RNN7;T1Q632;S4STI1;R9Y478;R9Y412;Q9B2U8;Q9B138;Q8WCW3;Q8HNR6;Q8HNR1;Q85KS0;Q7YEH2;Q7YCE6;Q7Y6N0;Q7Y6M3;Q7Y626;Q6VJJ3;Q6VJD8;Q6VIG7;Q6RQ80;Q5S971;I3Q4M2;K7X9X2;I6UIH6;Q4GQP0;Q4GHE1;Q4GCZ4;Q4GCG2;Q4F4V6;Q4EZD4;H9RV93;Q15HH9;Q0Z7S0;Q0Z7K3;I3PYD8;Q0Z7F1;Q0Z7D8;Q09U41;Q06TE6;N0BMC4;L7XQ86;L7XMG0;L7NVC9;K9M370;Q4GVP5;J7FG21;I6PZI4;H9RA87;H9S868;Q19MP7;H9RKS9;H9RJL3;H9RF01;H9RD12;I6PRP7;H9RAX1;H9QLC8;H9QH59;H9Q9T5;H9PMX8;H9PDV6;H9MK30;H9M675;H9LMC2;H9E7D1;G9LKX8;G9LHJ5;A0A342LG30;A0A346LZU9;A0A059RZV1;A0A059QPR4;A0A3S9JHN1;A0A3S9JHM1;A0A346M047;A0A3Q8UG27;A0A3Q8A5Z2;A0A218N9E7;A0A143G082;E5EWG2;A0A059QQA7;A0A6B7Q1T4;A6ZF47;A0A6B9Q7Z4;E7E4E0;A0A6B9RA68;A0A3S9JI82;A0A410RF05;A0A4D6CUW3;A0A4D6FL11;A0A4D6FNQ5;A0A4D6FST5;A0A5P9RNX7;A0A649YE60;A0A649YEF8;A0A649YEQ1;A0A649YES9;A0A6B7PVN7;A0A6B7PYH4;A0A6B7Q1E7;A6ZEU4;A6ZFK3;A0A059QI72;A6Z3M5;A1Z455;A0SA07;A0A6G9L5D8;A0A1B1PEQ8;A0A346LZY3;H9E7P8;A0A8A9WMX6;H9E7W2;A0A343GQC6;H9E7T7;A0A059QPT6;A0A059S242;H9E7F7;A0A7G4BTR8;A0A346M0E0;A0A6B9RCS6;A0A6B9RFD0;A0A6H0MSY6;A0S3T1;A0A6H0MV09;A0A6H0MWV7;A0A7D5PJ23;A0A7D5U3G9;A0A3S8PQC9;A0A7G4BHA1;A0A7T4WPA6;A0A7T0Q5U3;A0A346LZT8;A0A6B9R926;A0A8A6VHT6;A0A8A6VIW3;A0A059QPE9;A0A8F5ZDB1;E5E1A6;A7LF11;E5EWL4;C5H6M7;D1G421;C8YBL1;C8Y3Q5;C8Y3G4;C8XWJ6;C5H6M8;C5H6M5;B2XL43;C5H6M4;C5H6M3;C5H6L3;B5M7M0;B3GUF3;E5EWR3;D2IKF4;A0A346M081;A0A059QVH0;A0A059QTW9;A0A342YDT1;A0A342YTK5;A0A0D4WQL7;A0A343E1A9;A0A0D3MLN1;A0A343E4Y3;A0A343E999;A0A343ECF4;A0A097Q0T5;A0A097PWY7;A0A097PWR7;A0A068IXK4;A0A068BY99;B3DE06;A0A059SAH5;B2XIR3;F2WI31;B2XHT9;G5D8C8;G5D863;G4W3U1;G4W3M6;F2WJ84;F1CIN6;A0A023QZ25;G5D8Q5;Q14XT3;F1AZ87;E7CNQ9;A0A3Q8UFB0;E5FWC0;G5D8J3;A0A346M077;G5D8K6;B1W855;E5E079;B2WRY8;A0A1B1LLS4;E5DZN4;A0A059QS59;A0A059QLX8;E2JFC4;B2CB37;G5D8N2;A7LFA2;E2DTL8;G3CA49;A0A7D5PKH7;A0A6B9RAE1;H9SYF8;H9RJM6;C9D661;A0A0B5E697;A0A1L1ZJP0;A0A059S8A4;X2D4D6;A0A1B1PEM6;A0A059QNV4;A0A3Q9X1I8;A0A3Q9WXG2;X2D546;X2D4V3;X2D3Z7;X2D4V5;X2D4U5;X2D4U2;X2D4K6;X2D544;X2D3Z6;X2D4F2;X2D3Z8;X2D4E2;G9C8L9;A0A3Q9X1R8;A0A3Q9WYE7;A0A3Q9X065;A0A3T1BA63;A0A059RUZ1;A0A1B0W1E4;A0A410RF02;A0A8A0WQ04;A0A059RRR2;A0A8A0WR66;A0A059RTG7;A0A059RUP9;A0A059S2S6;A0A8A0WQF7;A0A059QM31;A0A346M0J4;H9E779;H9E7B8;A0A343GRX2;A0A059RQQ2;K7WG81;K7WVJ5;A0A059QPE7;A0A059QPU3;A0A059QPY9;A0A059RI85;A0A059RMK0;A0A059RP05;A0A059RQI1;G9LAZ4;D3WYY8;E9LAG1;A0A649YFA6;A0A343JMJ6;A0A343JRN0;Q4GW12;A6ZHA9;A0A1S6N0P5;A0A1V0MD25;A0A343GRJ2;A0A343LEZ9;A0A343SU56;A0A649YFC1;A0A343GJ29;A0A6G7GCJ6;A0S2P1;B2XP28;J7HPF9;C5H6K5;C5H6K6;E2JJS5;E0AF97;E5E1V1;E7CM18;A0A343H538;A0A343GF90;E9P659;A0A023QCZ2;H9STE0;X2D537;F2WGV2;A0A068BTX8;A0A343E934;A0A023QRX9;A0A343FHH8;A0A059RMS5;A0A068BP29;A0A068BST3;A0A097PYA5;Q5XRW8;A0A097QC07;A0A0E3D6T2;A0A141ZQJ3;A0A1L1ZCG1;A0A342Y3K6;C5H6K7;H9PWQ9;A6Z6E8;Q8HQB7;Q4EYL1;H9S054;L7YNE0;H9T056;A0A6B9R9R6;A0A7D9MZ98;A0A7G5XR55;A0A3Q9CRS0;A0A7G5XR94;A0S0W7;A1Z4V2;A4ZKZ0;A6YXV0;A0A343UCM2;S4UQ76;A0A345AIS8;A7LDC6;B0Z6W4;B2XPS3;D2K1G3;D3YPT7;H9S5Y2;A0A343KKD7;Q9B1F9;D5M8T1;D7NUN3;A0A3Q8R159;X2D4T8;B2XHF9;Q4F6A2;A0A097PX98;A0A649YH59;A0A6G7GD51;A0A343GR10;A0A1B0W2I6;A0A141ZQA2;A0A343KKL6 COII;COX2;MT-CO2;cox2 Cytochrome c oxidase subunit 2 yes no 0 0 0 2.5 0.5 1 1 45.945 46.021 2 0.0096238 12311 20230619_1882_Aki_TMTPro18x_K_F3 119.07 58.728 505550 456130 512840 573510 782410 795560 821520 815070 952930 486970 613620 588010 659100 550890 550000 636730 649470 539610 467830 418420 524910 572430 791880 788030 829430 822360 948180 513640 647300 591830 666240 573800 567120 632900 619690 513960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 638200000 16461 1057 15603 31282;31283 25064;25065 25065 2 9606 Homo sapiens 0.017046388292783377 LLDVESEAK Unmodified 1002.5233 0.523341 4163 Q7Z2Z1-2;Q7Z2Z1 TICRR Treslin yes no 0 0 0 3 0 1 54.3 54.347 2 0.012724 16100 20230619_1882_Aki_TMTPro18x_K_F3 95.352 47.446 58819 51791 53077 67620 55178 70794 67880 66545 83196 69894 78427 71141 73346 59799 66940 76043 76902 66645 54370 47532 54534 66999 57599 71215 68163 68380 83633 70524 80409 71821 74706 62912 68779 75611 73412 63437 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12653000 16462 4163 15604 31284 25066 25066 1 9606 Homo sapiens 0.022180266238592594 LLDVIHTENK Unmodified 1180.6452 0.64518747 653 A0A024RB77;G3V5T9;P24941;A0A024RB10;P24941-2 CDK2 Cyclin-dependent kinase 2 yes no 0 0 0 6.5 0.5 1 1 51.912 51.987 3 2.1918E-05 14774 20230619_1886_Aki_TMTPro18x_K_F6 144.17 99.325 128370 90705 101620 107760 98416 140130 106520 125250 167760 136160 111440 109800 163040 131960 92761 187890 137890 140290 118390 83238 105470 107860 103150 138820 108840 129170 165210 136360 119130 113560 161450 138330 98583 184960 131510 133740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159820000 16463 653 15605 31285;31286 25067 25067 1 9606 Homo sapiens 0.06209068706198195 LLDVVHPAAK Unmodified 1061.6233 0.62332982 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;F8WAM2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 4.5 3.04 1 1 1 1 49.827 49.88 3 1.2716E-05 14274 20230619_1880_Aki_TMTPro18x_K_F1 130.94 91.918 1378100 1232200 1339600 1371100 1442800 1450700 1523300 1442400 1625100 1602400 1629900 1507100 1764800 1328200 1727500 1719400 1536700 1527900 1274700 1129100 1365600 1374900 1491500 1461500 1534500 1478700 1650400 1607900 1677500 1528900 1793600 1397300 1746700 1711000 1472100 1453300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2824000000 16464 4005 15606 31287;31288;31289;31290 25068;25069;25070 25068 3 9606 Homo sapiens 0.09498308748311501 LLDYTEKPLYENLR Unmodified 1765.9251 0.92505073 1689 Q99986;A0A7P0TA65;A0A7P0T824;A0A7P0TA16;H0YJF7;A0A7P0TBE4;A8K245;A0A7P0T9E5;A0A7P0T838;A0A7P0TB15;A0A7P0T9T1;A0A7P0T952;A0A7P0T977;A0A7P0TAS8;A0A7P0T9I1;A0A7P0TBB8;A0A7P0T8N0;A0A7P0Z445;H0YJJ9;A0A7P0TAA6;A0A7P0T925;A0A7P0Z3Z7;A0A7P0Z462;H0YJ50 VRK1 Serine/threonine-protein kinase VRK1 yes no 0 0 1 7.5 0.5 1 1 59.386 59.431 3 0.019623 17554 20230619_1887_Aki_TMTPro18x_K_F7 62.055 45.371 54597 45225 65384 67382 55868 54490 57770 57983 41876 59641 71025 31288 26925 19788 86084 25181 22792 21271 50570 41578 65373 66046 58700 56164 57727 59054 44736 59254 69405 32745 31574 21115 82671 25200 22409 20250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92723000 16465 1689 15607 31291;31292 25071 25071 1 9606 Homo sapiens 0.072725204665403 LLDYVPIGPR Unmodified 1141.6495 0.64954457 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;A0A994J5C5;A0A994J855;Q96D47;D3DXJ4;I3L2G1;A0A0J9YXN6 NSF Vesicle-fusing ATPase yes no 0 0 0 2.5 0.5 1 1 62.01 62.03 2 7.9262E-07 19493 20230619_1881_Aki_TMTPro18x_K_F2 182.73 139.68 173500 154060 164310 179490 165350 192470 194120 193060 206050 215390 232160 229390 251460 220030 233380 245560 253160 268300 160440 141230 167810 179380 172520 193660 194460 197790 210330 216900 237820 231980 255210 228640 238790 247600 242140 254540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357040000 16466 1435 15608 31293;31294 25072 25072 1 9606 Homo sapiens 0.08438577919810086 LLEAFHNQGPVIK Unmodified 1464.8089 0.80889876 522 A0A024R8L0;J3QLS3;Q9Y2R9;J3KSI8;J3QQS1 MRPS7 28S ribosomal protein S7, mitochondrial yes no 0 0 0 1.5 0.5 1 1 55.733 55.743 3 5.7489E-07 16946 20230619_1881_Aki_TMTPro18x_K_F2 143.76 116.43 81688 67340 76074 74262 64927 77872 78555 81147 84509 84307 86549 87206 92146 74596 93195 99371 86024 93935 75495 61715 77572 74523 68748 78552 78639 82752 85849 85107 88976 88002 93879 78682 94391 99139 82431 89249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 331370000 16467 522 15609 31295;31296 25073 25073 1 9606 Homo sapiens 0.09508666477108818 LLEAHEEQNVDSYTESVK Unmodified 2089.9804 0.98039335 109 A0A024R0R9;P54920;M0R0Y2;M0R213 NAPA Alpha-soluble NSF attachment protein yes no 0 0 0 3 0 1 50.834 50.904 3 7.4744E-15 14503 20230619_1882_Aki_TMTPro18x_K_F3 168.68 131.67 57964 49740 61364 70072 47112 63186 65809 68019 80999 87595 84498 92221 107360 88508 79376 113280 107110 119540 53640 45692 61909 68986 50661 64486 65763 69687 81849 87613 87555 93298 107520 92758 82928 113670 102300 113430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192330000 16468 109 15610 31297 25074 25074 1 9606 Homo sapiens -0.020997625943437015 LLEAIVQR Unmodified 940.57057 0.57056597 2992 F8W8C1;Q6ZTA4;Q6ZTA4-2 TRIM67 Tripartite motif-containing protein 67 yes no 0 0 0 1 0 1 58.501 58.501 2 0.012723 17895 20230619_1880_Aki_TMTPro18x_K_F1 89.296 54.403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16469 2992 15611 31298 25075 25075 1 9606 Homo sapiens 0.09790350685523208 LLEAQSHFR Unmodified 1099.5774 0.57744226 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q14917;A0A1B0GUH3;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 7.5 0.5 1 1 42.243 42.282 3 4.0878E-10 10384 20230619_1888_Aki_TMTPro18x_K_F8 196.88 127.96 208940 165850 183820 191160 199670 223210 209630 213020 277330 196210 205820 188560 220790 179030 204440 247760 235140 213990 192970 152080 189100 191440 206620 223060 212840 217840 275610 199150 215070 191670 224100 188620 210100 245850 224530 203680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 480780000 16470 1022;3868 15612 31299;31300 25076;25077 25077 2 9606 Homo sapiens 0.03163663566078867 LLEATELK Unmodified 915.5277 0.5276981 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 5.5 0.5 1 1 55.917 55.986 2 0.0011276 16257 20230619_1885_Aki_TMTPro18x_K_F5 148.38 68.785 372950 318360 363100 372990 337520 426380 432900 427280 513090 471580 478070 556440 569100 474730 442120 657460 586400 659310 344870 291890 369460 373000 355680 427020 433410 437640 516730 476870 496560 558350 572030 502040 460990 657130 560170 625930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 494080000 16471 1022;3868 15613 31301;31302 25078;25079 25078 2 9606 Homo sapiens 0.06655535837410298 LLEAVGGPDCHLR Unmodified 1435.7242 0.72418285 4275 Q8WU76-2;Q8WU76 SCFD2 Sec1 family domain-containing protein 2 yes no 0 0 0 6 0 1 48.912 48.989 3 6.89E-05 13482 20230619_1886_Aki_TMTPro18x_K_F6 107.99 96.075 47975 36174 48099 51312 52709 68675 57355 55163 71996 46101 43601 48461 46592 39137 47825 52822 44374 50343 44340 33249 48957 50774 54613 67767 57985 57049 71315 47210 46246 48777 47524 41398 48451 52708 42531 47820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67255000 16472 4275 15614 31303 25080 25080 1 9606 Homo sapiens 0.023749726688492956 LLECPHLNVR Unmodified 1249.6601 0.66012603 2382 Q8TEX9-2;Q8TEX9;B3KQ33;Q59FI4;B3KPS9;B3KT38;B3KTB3;D3DS63;H0YN14;Q59H62;B3KSQ4;Q6I9Y8;B3KPY9;B4DXR7;H0YMR4 IPO4 Importin-4 yes no 0 0 0 8 0 1 46.135 46.173 3 8.9104E-08 11957 20230619_1888_Aki_TMTPro18x_K_F8 189.72 172.36 72812 61445 59489 75249 66712 71254 84150 64490 83706 110430 81963 71008 121480 88804 76564 121520 92580 95162 67238 56364 61754 74784 69180 72229 83756 67626 85438 107950 85796 74528 120500 92820 79778 119980 88443 90655 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 453010000 16473 2382 15615 31304 25081 25081 1 9606 Homo sapiens 0.04528237302565685 LLECYFTR Unmodified 1100.5325 0.5324659 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;H0Y659;Q5H935;Q53FW4;Q3B7K0 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 1.5 0.5 1 1 59.307 59.313 2 0.0022541 18188 20230619_1880_Aki_TMTPro18x_K_F1 129.65 94.501 170210 134980 167850 156680 143330 160900 166330 172030 176850 192350 184210 176120 193140 170780 182490 215040 218310 217910 157340 123780 170260 156610 151450 162660 166800 175480 179980 192770 189010 179430 196420 178680 187910 215440 208530 206940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79511000 16474 594 15616 31305;31306 25082;25083 25082 2 9606 Homo sapiens -0.01377903291495386 LLEDEPR Unmodified 870.4447 0.44469675 1792 Q8NFD5-1;A0A8Q3S458;Q8NFD5-3;Q8NFD5-2;Q8NFD5;A0A1B0GTJ8;A0A6Q8NVI4;A0A3F2YNW7;H0Y7H8;A0A1B0GWJ2;A0A1B0GV63;A0A1B0GVK1;A0A8J9GB59;Q9NWF5;A0A1B0GTI6;B4DYC0 ARID1B AT-rich interactive domain-containing protein 1B yes no 0 0 0 1 0 1 43.223 43.223 2 0.043978 11530 20230619_1880_Aki_TMTPro18x_K_F1 88.942 29.737 43763 32596 45408 48291 64736 62117 56096 57526 66550 44735 59555 59939 59404 56382 57532 43285 65683 57762 40457 29977 46288 47638 65413 61658 57377 58740 66851 46406 61433 60032 60591 57569 58899 44579 62711 54738 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15109000 16475 1792 15617 31307 25084 25084 1 9606 Homo sapiens 0.004292191094236841 LLEDSALSK Unmodified 974.52843 0.52842638 119 Q96GM5;A0A024R102;A0A024R137;Q96GM5-2;B4DF50 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 0 0 0 5 0 1 53.77 53.839 3 0.029239 15417 20230619_1885_Aki_TMTPro18x_K_F5 58.433 38.647 70509 59233 62044 76644 76915 79321 80019 77004 81454 96930 94375 87528 96239 82226 83876 101430 95779 96737 65144 54366 64041 75982 78760 79969 80543 79367 83507 96582 96252 89127 97579 86014 86263 101310 91532 91928 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235780000 16476 119 15618 31308 25085 25085 1 9606 Homo sapiens 0.04014330486484141 LLEEALLR Unmodified 955.57023 0.57023162 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5.25 0.829 1 1 2 60.95 60.976 2 2.171E-05 18504 20230619_1886_Aki_TMTPro18x_K_F6 136.33 68.3 779350 671320 721790 773030 691320 816770 825400 783440 860200 965210 886300 899880 979980 818850 882090 1015100 919330 993960 720440 615390 737960 773060 724540 821900 825610 807630 876180 963590 912390 913670 992430 857870 901520 1015300 879770 944020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2995299999.9999995 16477 3758 15619 31309;31310;31311;31312 25086;25087;25088;25089 25088 4 9606 Homo sapiens 0.09066930965650499 LLEEDVK Unmodified 844.4542 0.45419881 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 2.5 0.5 1 1 50.466 50.53 2 0.012714 14697 20230619_1881_Aki_TMTPro18x_K_F2 119.21 27.305 357830 306140 317580 368640 366560 449520 391020 385130 526150 431710 442930 514180 532560 454020 349120 637920 668620 640030 330660 280760 327070 368120 378210 446840 396880 399180 524890 436610 462500 516360 532430 479990 377440 637250 636440 607990 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 202110000 16478 3440 15620 31313;31314 25090;25091;25092 25090 3 9606 Homo sapiens 0.025749873949507673 LLEEEDSK Unmodified 961.46041 0.4604064 465 Q96CT7;A0A024R7M8;M0R2F5 CCDC124;LOC115098 Coiled-coil domain-containing protein 124 yes no 0 0 0 1.5 0.5 1 1 47.362 47.4 2 0.00044287 13294 20230619_1880_Aki_TMTPro18x_K_F1 163.9 30.297 134420 95898 128850 149810 138310 156170 139100 142190 180750 171040 188200 186650 188060 154740 144840 123450 229170 198500 124160 88267 131620 146840 143050 157050 141530 147030 182060 171820 192640 187520 189920 159170 152550 128850 218240 187850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278490000 16479 465 15621 31315;31316 25093 25093 1 9606 Homo sapiens -0.021865391641881615 LLEEENQESLR Unmodified 1358.6678 0.66777341 2830 D3DVC4;P48681 NES Nestin yes no 0 0 0 1 0 1 47.229 47.229 2 1.9283E-30 13212 20230619_1880_Aki_TMTPro18x_K_F1 277.36 234.49 241260 183210 193850 189460 233200 273820 310720 306690 374890 412430 326410 320170 448190 304130 305830 469130 350530 334820 222620 167870 201540 192110 241490 271250 310580 313580 376800 408280 342320 328800 446310 323210 316860 460770 334840 319490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 483130000 16480 2830 15622 31317 25094 25094 1 9606 Homo sapiens 0.0027862331317010103 LLEEERDQR Unmodified 1186.5942 0.59421454 1791 Q14789-2;A0A8Q3SHP0;Q14789;Q14789-3;Q14789-4;A0A8J9C4H3;E7EU81;A0A8Q3WKE2;A0A8Q3SHI9;A0A8Q3WLR7 GOLGB1 Golgin subfamily B member 1 yes no 0 0 1 1 0 1 36.112 36.112 3 0.0023536 8406 20230619_1880_Aki_TMTPro18x_K_F1 105.36 67.065 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16481 1791 15623 31318 25095 25095 1 9606 Homo sapiens 0.008381196613754582 LLEEHAK Unmodified 838.45487 0.45486751 3626 Q53HT6;Q53G72;P51572;P51572-2;A0A2R8Y5M6 BCAP31 B-cell receptor-associated protein 31 yes no 0 0 0 3.5 0.5 1 1 39.552 39.6 3 0.0041746 9441 20230619_1882_Aki_TMTPro18x_K_F3 112.17 74.696 237470 172970 237960 252380 274400 275470 267430 298510 381920 285710 361250 344560 355320 292300 314760 251520 400740 347560 219440 159060 242280 248610 281930 277300 273640 302940 381360 291380 371160 345290 360900 301250 325130 259030 382220 329290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 562910000 16482 3626 15624 31319;31320 25096;25097 25096 2 9606 Homo sapiens 0.029178268346640834 LLEELEEGQK Unmodified 1186.6081 0.60813326 1895;3100 A0M8W4;Q15819;Q13404-8;H0YBX6;E5RIF1;D6RG00;I3L0A0;Q13404;Q13404-7;Q13404-2;Q13404-1 UBE2V2;UBE2V1;TMEM189-UBE2V1 Ubiquitin-conjugating enzyme E2 variant 2;Ubiquitin-conjugating enzyme E2 variant 1 no no 0 0 0 2 0.816 2 2 2 61.004 61.018 2;3 2.0879E-13 19004 20230619_1881_Aki_TMTPro18x_K_F2 248.81 198.69 624820 493640 575590 630520 533840 613530 591510 590810 662480 739770 724110 713520 770700 666590 677840 851370 758520 821270 577250 453130 588480 625240 559720 621150 595530 609240 673850 738770 741970 724140 780790 698900 696360 850360 725400 780130 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1867499999.9999998 16483 1895;3100 15625 31321;31322;31323;31324;31325;31326 25098;25099;25100;25101 25099 4 9606 Homo sapiens 0.022293523697953788 LLEENVSAFK Unmodified 1148.6077 0.60773933 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;B3KVJ5 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 6 0.816 1 1 1 58.876 58.936 3 0.00013841 17691 20230619_1886_Aki_TMTPro18x_K_F6 122.98 98.599 56099 44537 46859 47718 46930 57449 54388 54014 56766 66122 63575 60707 66377 55308 59004 71598 66733 61724 51793 40813 48384 48080 49004 57279 54492 55728 58020 65996 65011 61707 67300 58087 60624 71102 63740 58749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121170000 16484 4593 15626 31327;31328;31329 25102;25103 25102 2 9606 Homo sapiens 0.03937977440614304 LLEESNMELEERR Unmodified 1646.7934 0.79338463 873 J3KPF9;Q2UVF2;A0A087X011;E9PES4;B4DHG8;Q9Y496;H7C2F6 KIF3A Kinesin-like protein;Kinesin-like protein KIF3A yes no 0 0 1 3 0 1 61.464 61.493 3 0.030168 19013 20230619_1882_Aki_TMTPro18x_K_F3 45.28 18.026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16485 873 15627 31330 25104 25104 1 9606 Homo sapiens -0.0041403289289974055 LLEFLLK Unmodified 874.55279 0.55279064 4765 yes no 0 0 0 3 0 1 65.056 65.09 2 0.0075954 20575 20230619_1882_Aki_TMTPro18x_K_F3 123.96 0 + 66360 53094 55957 59363 44418 63720 54157 54568 59417 77176 71257 67605 76623 64128 65139 86598 75267 83977 61274 48671 57566 59504 47460 63878 54243 56982 60795 76475 72755 68970 77481 67468 67122 86444 71977 79758 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32082000 16486 4765 15628 31331 25105 25105 1 9606 Homo sapiens 0.1104963543066333 LLEFNQGK Unmodified 947.50763 0.50763136 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4;A0A6Q8PHI7;H7C443;A0A6Q8PFZ6;A0A6Q8PF45;A0A6Q8PH49;Q75MN1 GARS Glycine--tRNA ligase yes no 0 0 0 8 0 1 54.226 54.298 3 0.0030235 15404 20230619_1888_Aki_TMTPro18x_K_F8 98.009 10.758 116230 84039 100040 110670 88186 118710 117950 112070 139620 152440 151570 181620 167420 139580 177460 178500 164200 196110 107280 77194 102890 109660 93569 119220 117870 116060 141550 152750 155900 181520 170810 147450 179560 179730 157460 185960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235460000 16487 3576 15629 31332 25106 25106 1 9606 Homo sapiens 0.03177784897479796 LLEGEECR Unmodified 1004.4597 0.45969489 2787;3438;2803 CON__P35908v2;CON__P35908;P35908;CON__Q6NXH9;B4DRY0;CON__Q7RTS7;CON__Q32MB2;F8W1S1;Q86Y46;Q7RTS7;H0YIC5;B4DQ49;P12036-2;P12036;CON__Q922U2;CON__Q5XQN5;B4E1T1;CON__P13647;P13647;CON__Q8BGZ7;CON__P50446;B4DL32;CON__P07744;CON__O95678;O95678;H0YI76;CON__Q8N1N4-2;CON__Q7RTT2;Q8N1N4-2;Q8N1N4 KRT2;KRT74;KRT73;NEFH;KRT5;KRT75;KRT78 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 74;Neurofilament heavy polypeptide;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 75;Keratin, type II cytoskeletal 78 no no 0 0 0 1.5 0.5 1 1 41.87 41.908 2 0.0024479 10932 20230619_1880_Aki_TMTPro18x_K_F1 126.57 80.545 + 190580 169360 166090 154100 805750 155260 140960 134280 211010 227130 278580 271420 298450 479340 251560 307160 360210 287730 176130 154930 179110 157070 762960 158700 182880 141180 214760 226290 283400 280660 303360 477380 262890 310400 343090 273760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154150000 16488 2787;3438;2803 15630 31333;31334 25107;25108 25107 2 9606 Homo sapiens -0.04235657084882405 LLEGEEER Unmodified 973.47164 0.47163978 1428;3482;1473 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;B4DFR3;P20700;E9PBF6;B4DZT3;Q03252;A0A384NPH0;A0A0A7M1X5 LMNA;LMNB1;LMNB2 Prelamin-A/C;Lamin-A/C;Lamin-B1;Lamin-B2 no no 0 0 0 1.5 0.5 1 1 41.756 41.794 2 9.646E-05 10826 20230619_1880_Aki_TMTPro18x_K_F1 180.93 104.89 563430 401080 427880 538580 713280 740830 666800 661850 859430 685460 746820 756440 445780 632270 311060 1159400 380970 786980 519530 368510 450920 534940 717330 731940 680500 682060 859410 694050 757960 761680 460010 682240 327620 1133100 366640 749930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4835900000 16489 1428;3482;1473 15631 31335;31336 25109 25109 1 9606 Homo sapiens -0.01615717070046685 LLEGEESR Unmodified 931.46108 0.4610751 3414;2433 B3KWQ6;P41219;P41219-2;H7C5W5;Q96GE1;Q7L4M3;P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5;Q45VM7;P17661;L7RDA5;Q45VM8;Q45VM6;A5Z217;A0A384NPX1;Q53SB5;Q9H319 PRPH;VIM;HEL113;DES;tmp_locus_29 Peripherin;Vimentin;Desmin no no 0 0 0 2 0.816 1 1 1 41.013 41.058 2 1.1226E-06 10574 20230619_1880_Aki_TMTPro18x_K_F1 198.07 133.31 3173800 2110400 2505500 2245000 4829000 5474700 3833800 3440600 5995100 5078400 5339300 6224600 5741800 5096500 4207700 5210300 6808700 6719600 2926200 1935200 2634700 2297800 4812600 5244300 3985900 3696900 5958500 5084500 5529600 6223100 5779000 5301200 4454400 5315600 6488800 6366600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 14695000000 16490 2433;3414 15632 31337;31338;31339 25110;25111 25110 2 9606 Homo sapiens -0.0073969972447684995 LLEGEETR Unmodified 945.47673 0.47672516 1958;3949;2388 Q16352;Q59EM6;B4DE66;E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7;P07197-2;B3KQI5;P07196;B3KXJ0;Q8TCR7;B4DR43 INA;NEFM;NEFL;DKFZp761K0922 Alpha-internexin;Neurofilament medium polypeptide;Neurofilament light polypeptide no no 0 0 0 1.5 0.5 1 1 41.695 41.733 2 0.00019257 10805 20230619_1880_Aki_TMTPro18x_K_F1 169.57 63.14 551470 443620 494520 405330 265670 280930 247300 240770 330730 493550 682360 710420 575080 584010 578290 602350 779360 711840 509440 405980 502810 411470 293870 293190 253920 255980 346420 491600 678990 706880 591190 607090 599180 611140 743270 675200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 830700000 16491 3949;1958;2388 15633 31340;31341 25112;25113 25112 2 9606 Homo sapiens 0.0018058679256682808 LLEHSFIK Unmodified 985.55967 0.55966693 2600 D6W660;B4DV95;O14733;O14733-4;O14733-3;O14733-2 MAP2K7 Dual specificity mitogen-activated protein kinase kinase 7 yes no 0 0 0 1 0 1 51.12 51.12 3 0.0030211 14790 20230619_1880_Aki_TMTPro18x_K_F1 98.033 13.535 45104 35961 37999 39424 36737 40490 44532 41528 47919 53807 53825 45105 56265 48061 45982 54145 50721 52339 41646 32959 39183 39563 38483 40904 44556 42684 48890 53456 54985 46313 56855 49809 47246 54193 48495 49725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80702000 16492 2600 15634 31342 25114 25114 1 9606 Homo sapiens 0.06630948311237717 LLEIEPGKR Unmodified 1053.6182 0.61824444 3903 Q14964 RAB39A Ras-related protein Rab-39A yes yes 0 0 1 7.5 0.5 1 1 47.717 47.79 3 0.0048469 12616 20230619_1888_Aki_TMTPro18x_K_F8 76.465 49.161 52868 47710 54068 57917 39143 40678 51034 46087 49339 61056 64296 44149 63054 43306 63049 47420 48874 44300 48927 43750 54615 57440 42118 42593 50749 47147 50992 60363 65084 45597 64285 44981 63241 47471 46867 42126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117850000 16493 3903 15635 31343;31344 25115 25115 1 9606 Homo sapiens 0.09358004885712035 LLEIQGK Unmodified 799.48035 0.48035398 4678 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 0 0 0 8 0 1 52.876 52.951 3 0.027506 14821 20230619_1888_Aki_TMTPro18x_K_F8 72.234 11.272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16494 4678 15636 31345 25116 25116 1 9606 Homo sapiens 0.07259301357089498 LLELDSFLK Unmodified 1076.6118 0.61176208 180 V9HWJ8;A0A024R203;P61289;P61289-3;P61289-2;K9J957;Q6FHK7;J7FRP4;K7ENH2;B7Z8D3 HEL-S-283;PSME3 Proteasome activator complex subunit 3 yes no 0 0 0 8 0 1 64.435 64.456 3 0.0158 19753 20230619_1888_Aki_TMTPro18x_K_F8 66.27 25.241 14350 13101 18490 21655 12243 19414 20622 17579 20317 22881 22693 19072 21897 16955 10835 27710 21614 26716 13310 12056 18375 21119 13464 19734 20298 18243 20814 22722 23093 19487 21846 18140 11905 27559 20612 25366 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 648400000 16495 180 15637 31346 25117 25117 1 9606 Homo sapiens 0.07652066934338109 LLELFPVNR Unmodified 1099.639 0.63897988 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;B5MCE7;Q75MG1;E9PFD4 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 0 3 0 1 63.312 63.342 2 0.073225 19829 20230619_1882_Aki_TMTPro18x_K_F3 63.419 39.862 192160 213490 250490 212160 210240 224990 246130 213250 264600 225900 195610 196130 234380 181960 341400 243370 202380 254570 178530 195300 248770 214770 222280 226430 246650 219100 265780 226820 205950 200020 242840 191560 337080 244500 195350 241480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167810000 16496 607 15638 31347 25118 25118 1 9606 Homo sapiens 0.09314595265368553 LLELFTDLSCNPEMMK 2 Oxidation (M) 1971.8992 0.89917161 4077 Q5VW32-2;Q5VW32;Q5VW33;F5GXQ0;B7Z953;B7Z1V1 BROX BRO1 domain-containing protein BROX yes no 0 2 0 7 0 1 65.645 65.67 3 0.035801 20369 20230619_1887_Aki_TMTPro18x_K_F7 43.69 32.429 25462 23842 26533 23982 32478 24574 26100 28907 36309 22777 27522 24308 28693 27040 32196 27953 35862 35119 23574 21823 26919 24245 33020 24947 27009 29060 36023 23423 28690 24731 29442 27852 32854 28489 34272 33283 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30407000 16497 4077 15639 31348 25119 25119 2664;2665 1 9606 Homo sapiens -0.0479020115392359 LLELFTDLSCNPEMMK Oxidation (M) 1955.9043 0.90425699 4077 Q5VW32-2;Q5VW32;Q5VW33;F5GXQ0;B7Z953;B7Z1V1 BROX BRO1 domain-containing protein BROX yes no 0 1 0 7 0.816 1 1 1 66.265 66.294 3 0.00019865 20624 20230619_1887_Aki_TMTPro18x_K_F7 87.647 78.601 53279 51717 53401 52232 52978 55903 62331 66873 60786 54204 59009 57058 61669 58044 64147 65237 65982 70466 49324 47335 54225 52810 55270 56531 62279 67200 61923 55542 60755 57873 63014 60207 65294 65734 63145 66857 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36773000 16498 4077 15639 31349;31350;31351 25120;25121 25120 2664;2665 2 9606 Homo sapiens -0.03545897291314759 LLELFTDLSCNPEMMK Unmodified 1939.9093 0.90934236 4077 Q5VW32-2;Q5VW32;Q5VW33;F5GXQ0;B7Z953;B7Z1V1 BROX BRO1 domain-containing protein BROX yes no 0 0 0 7.5 0.5 1 1 66.944 66.965 3 0.00012018 20723 20230619_1888_Aki_TMTPro18x_K_F8 92.935 76.25 7597.5 6003.8 4104 7673.2 8045.6 9310.6 8322.7 9765.3 9493.1 6827.7 8318.3 9889.7 9264.4 7728 10398 9763.3 9342.7 9494.7 6997 5511.1 4542.6 7627.5 8066 9297.1 8407.6 9862.3 9549.1 7152 8646.7 9829.8 9477.7 8147.6 10492 9766.4 8950.3 9020.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16554000 16499 4077 15639 31352;31353 25122 25122 1 9606 Homo sapiens -0.02301593428705928 LLELGPKPEVAQQTR Unmodified 1677.9414 0.94136949 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 1 1 0 1 52.174 52.174 3 2.5364E-10 15248 20230619_1880_Aki_TMTPro18x_K_F1 128.64 91.87 254240 214250 238740 267990 249160 309880 298190 277170 330570 350960 322500 362320 400290 320600 312790 410210 366590 437780 235020 196570 244220 266720 259600 309340 298750 287440 334870 351090 334890 365800 401820 336970 323130 412000 350720 415250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 574030000 16500 3647 15640 31354 25123 25123 1 9606 Homo sapiens 0.12951646423266538 LLELLPGK Unmodified 881.5586 0.5586043 2481 Q8N684-3;Q8N684;Q8N684-2;B4DGF8;F5H669;F5H047;F5H6M0;J3QT54 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 0 0 0 2 0 1 62.715 62.724 2 0.030194 19847 20230619_1881_Aki_TMTPro18x_K_F2 87.323 65.175 76696 76680 88602 92219 82462 91818 88610 87435 103300 99777 107540 97988 102820 90012 87951 110060 113630 120560 71108 70286 88941 91861 86291 92792 89479 89978 104560 100140 109840 99339 104420 94190 91239 110800 108520 114370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89720000 16501 2481 15641 31355 25124 25124 1 9606 Homo sapiens 0.11308733942325944 LLELQELVLR Unmodified 1224.7442 0.74417324 854 A0A087WYC0;A0A8I5KT73;A0A1W2PQY5;A0A8I5KNZ1;A0A8I5QJQ7;A0A6Q8KRG2;B7ZC06;A0A8I5KZ68;A0A8J9BZL8;Q08379;Q08379-2;Q5HYE0;Q5PXD5 GOLGA2;DKFZp686K0319 Golgin subfamily A member 2 no no 0 0 0 8 0 1 64.535 64.556 2 0.010573 19772 20230619_1888_Aki_TMTPro18x_K_F8 82.831 38.453 44645 41976 44975 52348 41094 43666 49476 46614 52749 57126 57915 62357 61428 53849 60339 65483 57857 69925 41323 38497 45645 51899 43196 44895 49511 47731 53784 57316 59374 62768 62533 56440 61273 65851 55465 66323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124530000 16502 854 15642 31356 25125 25125 1 9606 Homo sapiens 0.14079091671101196 LLENMQSDLR Unmodified 1217.6074 0.60742176 1336 B7ZM73;A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;F8VZV1;Q6P148;F8VZV6;F8VQS2 MON2 Protein MON2 homolog yes no 0 0 0 5 0 1 55.081 55.148 2 0.048585 15932 20230619_1885_Aki_TMTPro18x_K_F5 66.19 39.228 28542 22715 24237 28672 21843 29481 29625 25862 33918 33494 29870 34327 37935 31500 35619 41534 39010 40588 26355 20848 24979 28468 23143 29654 29539 26893 34164 33476 31228 34709 38352 33120 36480 41505 37302 38555 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13576000 16503 1336 15643 31357 25126 25126 1 9606 Homo sapiens 0.007322344491058175 LLEPEDVDVVDPDEK Unmodified 1710.82 0.81997653 4288 Q8WXH0-2;Q8WXH0;D4YW74;G3V5X4;A0A669KBG2;A0A669KB61 SYNE2;TROPH Nesprin-2 yes no 0 0 0 1 0 1 61.238 61.238 3 0.00023823 18964 20230619_1880_Aki_TMTPro18x_K_F1 92.063 80.623 32451 30090 31611 32177 27472 32550 32163 30960 34047 31575 33946 33225 32871 29035 36441 34502 34230 33655 30025 27558 32123 32346 29006 32859 32227 31766 34566 31932 34796 33520 33756 30371 36860 34546 32769 31977 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19154000 16504 4288 15644 31358 25127 25127 1 9606 Homo sapiens -0.007000655205729345 LLEPFEVR Unmodified 1001.5546 0.55458155 4280 Q8WUY1 THEM6 Protein THEM6 yes yes 0 0 0 5 0.816 1 1 1 59.341 59.38 2 0.001677 17628 20230619_1885_Aki_TMTPro18x_K_F5 138.83 41.359 213720 188120 214620 213750 134180 148430 185970 180960 194330 234130 220090 224220 243020 200730 227440 263340 252530 273710 197720 172420 216700 213040 147110 155900 184940 184160 198720 233350 225660 227290 246540 211220 233140 264080 241530 259780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162750000 16505 4280 15645 31359;31360;31361 25128;25129 25128 2 9606 Homo sapiens 0.05386644448617517 LLEPLVTQVTTLVNTSNK Unmodified 1969.1096 0.10955703 3506 P26232-2;P26232-5;P26232;P26232-3;C9IZ88;C9J144 CTNNA2 Catenin alpha-2 yes no 0 0 0 5 0 1 65.445 65.489 3 4.0383E-24 20368 20230619_1885_Aki_TMTPro18x_K_F5 209.89 1.9735 38555 30389 36238 34156 30145 33151 45006 35326 37964 42835 38329 39914 50011 33680 32032 46082 46095 43455 35625 27860 36908 34195 32166 33662 44282 36169 39125 42784 39819 40437 49767 35645 33739 45918 43949 41311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 256090000 16506 3506 15646 31362 25130 25130 1 9606 Homo sapiens 0.16376663826417825 LLEPVLLLGK Unmodified 1093.7111 0.71108219 3200 M0R210;P62249;M0R3H0;M0R1M5;M0QX76;Q6IPX4 RPS16 40S ribosomal protein S16 yes no 0 0 0 2 0 1 64.675 64.683 2 1.086E-10 20665 20230619_1881_Aki_TMTPro18x_K_F2 161.92 116.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16507 3200 15647 31363 25131 25131 1 9606 Homo sapiens 0.16797509619095763 LLEQALVIEEQLR Unmodified 1552.8825 0.88245763 1005;1857 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8Y7I0;A0A2R8Y7M9;Q8TDI0;Q6ZU36;A0A8V8TR54;Q12873;Q12873-3;Q12873-2;B4DLC6;B4DKV1;B3KWV4;Q2TAZ1;I3L229;H7C3H7;H7C0J3 CHD4;CHD5;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3 no no 0 0 0 5 0 1 64.95 64.993 3 7.4412E-06 20172 20230619_1885_Aki_TMTPro18x_K_F5 105.14 82.31 7456.4 6980 9613.4 7864.8 7644.9 8567 7996.3 7390.9 7995.8 11915 8530.6 11366 10132 10248 10450 9280.9 10036 12806 6917.4 6395.4 9544.9 7884.8 8099.7 8586.4 8049.1 7754.2 8193.5 11777 8821 11502 10315 10556 10592 9544 9626 12116 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20314000 16508 1005;1857 15648 31364 25132 25132 1 9606 Homo sapiens 0.12813170128947604 LLEQWEKDDDIEEGDLPEHK Unmodified 2437.1285 0.12851416 3899 Q14696 MESDC2 LDLR chaperone MESD yes yes 0 0 1 2.5 0.5 1 1 57.762 57.784 4 6.2923E-22 17726 20230619_1881_Aki_TMTPro18x_K_F2 173.77 162.15 71224 66830 66960 62367 70392 62066 81924 73880 71618 74501 68386 47575 58851 43089 83745 53170 51729 30425 65886 61135 68388 63435 72993 63150 81605 74677 73446 74411 69827 49407 61461 45149 82776 52113 49656 29217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88265000 16509 3899 15649 31365;31366 25133 25133 1 9606 Homo sapiens -0.03256496131143649 LLESEAVNENLR Unmodified 1385.7151 0.71505795 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 0 0 3 0 1 50.945 51.016 3 0.00011825 14603 20230619_1882_Aki_TMTPro18x_K_F3 108.72 40.334 95116 79939 94347 88314 77913 104720 100730 96620 120500 84056 76594 80057 75657 67574 83988 87430 102740 76935 87960 73258 95649 88763 83012 104430 100830 98938 119780 85575 80665 81036 77719 71139 86300 86951 97943 73279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80804000 16510 4170 15650 31367 25134 25134 1 9606 Homo sapiens 0.037629025841852126 LLESPGVEAGEGEAEK Unmodified 1613.7784 0.77844607 722 A0A1U9X8D3;A0A1U9X8D1;A0A1U9X8C7;A0A1U9X8C1;A0A0G2JHC2;A0A024RCJ8;Q6NYC8;Q6NYC8-3 hCG_1821276;PPP1R18 Phostensin yes no 0 0 0 1.5 0.5 1 1 52.084 52.103 3 0.00057418 15221 20230619_1880_Aki_TMTPro18x_K_F1 75.574 66.292 18397 15770 17074 23171 19585 23132 22005 22160 27804 26241 26598 24906 26604 23154 28344 30078 30314 30696 17006 14494 17533 22773 20232 23361 22221 22818 27947 26268 27341 25299 27242 24310 28910 30143 28988 29147 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86329000 16511 722 15651 31368;31369 25135 25135 1 9606 Homo sapiens -0.0038920148920169595 LLETCSIALVGK Unmodified 1302.7217 0.72172323 3468 P17812;A0A3B3IRI2;B4E1E0;A0A8Q3WKZ7;B4DMB5;P17812-2;A0A8Q3WL40;A0A3B3IRQ8;A0A3B3ITF6;A0A3B3ITB8;A0A3B3ISY3 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 2 0 1 61.637 61.647 3 2.1537E-05 19340 20230619_1881_Aki_TMTPro18x_K_F2 122.51 92.703 226390 179440 187350 224080 162410 186670 207650 194530 195790 278490 247620 243600 273290 213060 247890 286360 293290 317990 209000 164680 193420 222120 171970 191810 206450 200530 202610 275700 252750 247820 276790 224870 255240 288200 280350 301600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110350000 16512 3468 15652 31370 25136 25136 1 9606 Homo sapiens 0.08247124211152368 LLETESFQMNR Oxidation (M) 1382.65 0.65001485 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 1 0 4 0 1 49.869 49.904 2 0.0095653 13978 20230619_1883_Aki_TMTPro18x_K_F4 72.23 53.45 50665 38223 48632 49525 41137 46766 44999 46777 47708 61531 63618 69913 72821 58958 54286 85210 65606 71456 46810 35098 49458 49054 43440 47500 45278 48191 49151 61616 64949 70241 73129 62548 56328 84342 62702 67994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73344000 16513 3833 15653 31371 25137 25137 2511 1 9606 Homo sapiens -0.026004152133282332 LLETGLVNMHR Unmodified 1281.6863 0.68634078 1336 B7ZM73;A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;F8VZV1 MON2 Protein MON2 homolog yes no 0 0 0 1 0 1 51.114 51.114 3 1.1024E-17 14805 20230619_1880_Aki_TMTPro18x_K_F1 199.59 164.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16514 1336 15654 31372 25138 25138 1 9606 Homo sapiens 0.05676506474060261 LLETHIHNQGLAAIEK Unmodified 1785.9737 0.97373226 898 A0A590UJ56;A0A590UJR3;A0A590UJ50;A0A090N7U0;Q13616;A0A590UJ21;B3KTW0;B4DLA3;A0A590UK34;A0A590UJA0;Q75MQ1 CUL1 Cullin-1 yes no 0 0 0 7 0 1 48.941 49.027 4 3.4581E-14 13157 20230619_1887_Aki_TMTPro18x_K_F7 170.11 143.75 279790 220430 240160 256190 245140 259650 244010 319750 305980 333240 317970 323070 370880 300000 283540 420260 366220 405130 258350 202150 247380 255970 254330 263730 248280 322580 308970 335590 327910 327850 372670 316660 295200 419090 349860 384810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 821180000 16515 898 15655 31373 25139 25139 1 9606 Homo sapiens 0.11218433826297769 LLETIHWR Unmodified 1066.5924 0.59236404 1971 A6NHN7;A6NHB5;Q14202-2;Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes no 0 0 0 2 0 1 54.11 54.138 3 7.1045E-05 16250 20230619_1881_Aki_TMTPro18x_K_F2 168.23 129.09 19662 16108 19131 17681 17869 21403 21854 20686 25825 26148 21685 27902 23579 21974 29487 24646 27612 32665 18177 14763 19454 17787 18785 21345 21923 21327 25935 26185 22587 28009 24300 23009 29751 25187 26472 30922 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33904000 16516 1971 15656 31374 25140 25140 1 9606 Homo sapiens 0.061731554340894945 LLETLFVHR Unmodified 1126.6499 0.64987892 1467 B3KM97;A0A384NL45;Q9NZ01;B3KSQ1;M0R2N5 TECR Very-long-chain enoyl-CoA reductase yes no 0 0 0 3 0 1 60.713 60.742 3 8.4959E-09 18715 20230619_1882_Aki_TMTPro18x_K_F3 206.78 145.99 15136 10668 12668 13267 10942 22123 18754 17171 24629 17369 13729 19694 20776 16970 20725 18192 19801 24836 13965 9794.4 13070 13296 11805 21554 18618 17886 24308 17635 14955 19770 20978 17674 21010 18640 18989 23500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13124000 16517 1467 15657 31375 25141 25141 1 9606 Homo sapiens 0.09161997639648689 LLETTDRPDGHQNNLR Unmodified 1877.9344 0.93438664 3904 Q14974;B2RBR9;Q14974-2;B7Z5M1;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 0 1 4 0.816 1 1 1 37.292 37.356 4 2.4579E-42 8442 20230619_1883_Aki_TMTPro18x_K_F4 278.3 242 176190 149730 159130 167830 172380 187030 167690 190450 187560 216550 225530 220530 229100 191040 199320 229760 238200 220070 162830 137230 163300 168320 177920 187810 170100 194930 191630 217490 229710 222720 232280 200090 205510 229650 227410 209200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2274000000 16518 3904 15658 31376;31377;31378 25142;25143;25144 25143 3 9606 Homo sapiens 0.03053681804772168 LLETTEEDK Unmodified 1076.5237 0.52373493 4150 Q7L0Y3;C9JVB6 TRMT10C Mitochondrial ribonuclease P protein 1 yes no 0 0 0 1 0 1 49.073 49.073 2 2.2721E-06 13977 20230619_1880_Aki_TMTPro18x_K_F1 189.7 125.44 94245 67104 80783 98269 117170 139730 111930 122820 150110 115720 129820 135390 139650 116050 99983 129460 137030 141330 86973 61716 83858 97148 118870 137680 114310 126390 149860 118010 134560 135900 140350 121080 104570 130460 130780 134090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159310000 16519 4150 15659 31379 25145 25145 1 9606 Homo sapiens -0.011465984469623436 LLEVAVP Unmodified 739.44799 0.44799122 2174 E9PDF6;B0I1S9;O43795-2;O43795;B3KQI2 MYO1B Unconventional myosin-Ib yes no 0 0 0 4.5 0.5 1 1 63.973 64 2 0.036589 19997 20230619_1883_Aki_TMTPro18x_K_F4 92.279 70.175 52597 39692 40294 53664 42505 51386 50966 47421 57124 47915 52816 45196 48874 40421 43675 51821 55309 49477 48518 36463 42077 52986 44273 52025 51072 48761 57633 48338 54163 45886 49766 42463 45188 51737 52766 47040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75025000 16520 2174 15660 31380;31381 25146 25146 1 9606 Homo sapiens 0.06784513954085014 LLEVEHPAAK Unmodified 1105.6132 0.61315906 3470 P17987;E7ERF2;F5H136;F5GZI8;F5H726;F5H676 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 5 0.816 1 1 1 44.627 44.698 3 1.1511E-05 11529 20230619_1886_Aki_TMTPro18x_K_F6 131.82 97.064 1430900 1190900 1319000 1399500 1373700 1409600 1482100 1393200 1555400 1636700 1745600 1756300 1970800 1496000 1626300 1974800 1846400 1789200 1322400 1092100 1350400 1396600 1424700 1424900 1490500 1431500 1588800 1644500 1791800 1769300 1986700 1577500 1673800 1965400 1764100 1701600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3429799999.9999995 16521 3470 15661 31382;31383;31384 25147;25148;25149 25149 3 9606 Homo sapiens 0.06457701023077789 LLEVLSGER Unmodified 1014.571 0.5709599 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 5.5 0.5 1 1 61.182 61.235 2 0.0029928 18678 20230619_1886_Aki_TMTPro18x_K_F6 101.25 46.476 296980 245090 297750 307410 287670 338380 337890 353950 379610 379330 371230 361110 382740 314980 366880 405480 394520 413720 274630 224900 302360 305790 301120 340110 339150 361100 384110 381390 381750 365940 389460 331320 375100 406350 377340 392790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 241430000 16522 2337;3778;3779 15662 31385;31386 25150 25150 1 9606 Homo sapiens 0.06425725614724342 LLEVQGSRPGK Unmodified 1182.6721 0.67207093 3704 P62136;E9PMD7 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase yes no 0 0 1 2 0 1 43.075 43.157 3 0.00017871 11292 20230619_1881_Aki_TMTPro18x_K_F2 117.09 84.593 757940 571580 679290 729450 771580 864960 866670 842930 980660 987300 1024900 1016700 1094000 877560 952960 1132300 1058300 941700 699900 524760 698380 725440 797040 863780 871750 866430 994570 990930 1052400 1026300 1107300 923180 978280 1122700 1010700 896880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 637090000 16523 3704 15663 31387 25151 25151 1 9606 Homo sapiens 0.08804177317415451 LLEYDTVTR Unmodified 1108.5764 0.57643921 4555 Q9HDC9;Q9HDC9-2;H0Y512 APMAP Adipocyte plasma membrane-associated protein yes no 0 0 0 4.5 0.5 1 1 51.339 51.39 2 0.00018266 14633 20230619_1883_Aki_TMTPro18x_K_F4 144.9 100.77 510850 371570 474460 595740 451410 546930 572660 565750 624820 713620 811020 833100 849590 721310 672560 887100 893470 967590 471760 342100 485500 582140 474400 556810 572130 580860 641200 716700 824970 836690 857560 756570 700420 892610 853240 917900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 372200000 16524 4555 15664 31388;31389 25152 25152 1 9606 Homo sapiens 0.026494044064975242 LLEYTPTAR Unmodified 1062.571 0.5709599 2663 P49841-2;P49841;B5BUC0;Q6FI27;A0A7I2YQK0;A0A3B3ITW1;A0A7I2V5G5;A0A7I2V3J4;Q86TM2;A0A7I2V3G9 GSK3B Glycogen synthase kinase-3 beta yes no 0 0 0 7.5 0.5 1 1 49.97 50.049 2 0.00015752 13571 20230619_1887_Aki_TMTPro18x_K_F7 146.27 90.175 276390 229540 259260 270390 240160 283780 278810 271670 326430 280240 295320 270400 289710 242900 278210 329430 318270 302420 255470 210490 264590 269940 252240 285660 280380 278660 328450 282570 304060 274240 295350 256040 285600 327990 304030 287580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133960000 16525 2663 15665 31390;31391 25153 25153 1 9606 Homo sapiens 0.042177256146942455 LLFEGAGSNPGDK Unmodified 1303.6408 0.64083038 2247 J3QL14;B2R7M1;F5GYQ1;B7Z6L9;P61421;B7Z788 ATP6V0D1 V-type proton ATPase subunit d 1 yes no 0 0 0 5.67 0.471 1 2 55.192 55.264 2;3 3.371E-05 16154 20230619_1886_Aki_TMTPro18x_K_F6 151.26 111.55 80790 78191 77242 89775 85287 97310 94812 90198 109690 110870 106100 85542 117810 83468 77009 119590 100950 103970 74763 71646 78968 89810 88251 97682 95487 93190 110810 110190 109340 88020 117830 88163 80586 118590 96379 98905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197130000 16526 2247 15666 31392;31393;31394 25154;25155 25155 2 9606 Homo sapiens 0.0011555949265584786 LLFEVFDENR Unmodified 1280.6401 0.6401021 356;1625 P46934-4;A0A024R5S9;H0Y8H4;Q96PU5;Q96PU5-7;Q96PU5-5;Q96PU5-6;A0A6Q8PFI7;Q96PU5-2;Q96PU5-3;A0A6Q8PGP5;A0A6Q8PHJ5;A0A6Q8PG51 NEDD4;NEDD4L E3 ubiquitin-protein ligase NEDD4-like no no 0 0 0 4 0 1 64.32 64.328 2 0.031535 20147 20230619_1883_Aki_TMTPro18x_K_F4 69.276 42.177 12258 10790 10955 10237 10092 10636 9979.3 10146 11936 10618 13770 14530 13531 13554 14221 16661 14446 17643 11330 9873.6 11217 10400 10551 10724 10137 10415 12115 10828 14040 14550 13864 14167 14476 16740 13842 16735 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10293000 16527 356;1625 15667 31395 25156 25156 1 9606 Homo sapiens 0.011007648436134332 LLFGPTVR Unmodified 901.53854 0.53853756 513 A0A024R8D4;Q9Y399 MRPS2 28S ribosomal protein S2, mitochondrial yes no 0 0 0 5 0 1 55.305 55.369 2 0.010548 15990 20230619_1885_Aki_TMTPro18x_K_F5 111.04 74.448 96528 70425 83041 95868 88629 112910 103050 104260 123780 119060 111660 120360 139510 110880 113020 137060 133010 163880 89094 64709 85665 94912 92183 112620 103690 107490 124490 119600 116400 121800 140220 116170 116640 138720 127280 155260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85107000 16528 513 15668 31396 25157 25157 1 9606 Homo sapiens 0.08382983002377387 LLFGSGLPPALF Unmodified 1230.7012 0.70124579 1837 Q9P1R6;A0A8V8TNA9;Q969U7-2;Q969U7 PSMG2 Proteasome assembly chaperone 2 yes no 0 0 0 4.5 0.5 1 1 69.01 69.039 2 0.00020868 21739 20230619_1885_Aki_TMTPro18x_K_F5 116.54 101.77 8256.1 6804.1 7593.5 7246.9 7002.9 9396.4 9384.8 9529.5 7583.8 8665.9 9536.5 9862 8748.6 7529.7 10449 10749 10709 10970 7629.4 6233.9 7761.4 7315.8 7392.9 9338.6 9272.2 9700.1 7907.4 8834.1 9666.6 9882.7 9035.3 8013.2 10611 10760 10245 10416 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26848000 16529 1837 15669 31397;31398 25158;25159 25159 2 9606 Homo sapiens 0.0951232161369262 LLFSHDLVSGR Unmodified 1242.6721 0.67207093 4481 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 2 0 1 52.095 52.134 3 2.5537E-12 15359 20230619_1881_Aki_TMTPro18x_K_F2 196.44 152.01 47754 44239 42966 46454 40439 52953 41216 42810 49531 53985 57295 58254 55559 50410 59312 59248 56626 63082 44156 40510 44030 46828 42318 52823 41799 44738 50320 54092 58363 58674 56950 52716 60101 59615 54250 59852 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193960000 16530 4481 15670 31399 25160 25160 1 9606 Homo sapiens 0.06044177317380672 LLFTMLEK Unmodified 993.55689 0.55688974 2356 B4E0B7;B3KMS0;Q15021;B3KY03 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 3 0 1 64.343 64.375 2 0.0015162 20295 20230619_1882_Aki_TMTPro18x_K_F3 141.39 75.131 35566 29492 31125 31562 29334 31627 35408 33410 37599 33993 38321 26895 36326 32499 34733 40791 33931 37350 32856 27021 31962 31726 30776 32033 35419 34028 38188 34122 39122 27883 37069 33775 35340 40648 32497 35499 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46391000 16531 2356 15671 31400 25161 25161 1 9606 Homo sapiens 0.05985356862061053 LLFWGGSYGGAGQPQLISR Unmodified 2006.0374 0.037395144 2802 CON__Q3ZBS7 yes yes 0 0 0 7 0.707 1 2 1 63.623 63.657 2;3 2.2897E-60 19489 20230619_1887_Aki_TMTPro18x_K_F7 308.84 268.25 + 72648 68947 86817 123340 149000 206190 130900 140860 265370 222230 347920 409940 187360 239750 483010 224310 317170 264300 67351 63510 88246 120940 149940 200500 137150 150590 265500 226010 346900 401440 210730 251570 475360 228810 304700 250800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2308200000 16532 2802 15672 31401;31402;31403;31404 25162;25163 25163 2 9606 Homo sapiens 0.0746179426339495 LLGALCLQRPPVVSK Unmodified 1649.9651 0.96508182 4505 Q9H2W6;H0YN64;A0A087WT90 MRPL46 39S ribosomal protein L46, mitochondrial yes no 0 0 1 8 0 1 59.24 59.282 3 1.5421E-10 17484 20230619_1888_Aki_TMTPro18x_K_F8 190.06 163.39 92924 87884 79567 100660 92332 106200 99089 103590 123310 116280 115670 107130 129970 111930 107020 124070 127080 131860 85906 80532 82266 100670 95180 106920 100260 106340 123970 116600 119580 109370 131130 115970 110430 124870 121430 125140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14330000 16533 4505 15673 31405 25164 25164 1 9606 Homo sapiens 0.16609788656046476 LLGAPTHILR Unmodified 1089.6659 0.66586334 2155 H7C017;H7C3E5;A8KAK5;O60244 MED14 Mediator of RNA polymerase II transcription subunit 14 yes no 0 0 0 5 0 1 47.725 47.801 3 0.0004788 12812 20230619_1885_Aki_TMTPro18x_K_F5 103.26 45.088 22776 18325 20093 21330 21187 26651 24946 21992 30637 18730 20837 15681 21234 17180 21927 18805 22085 17076 21038 16805 20664 21364 22061 26432 25093 22709 30454 19046 21827 16133 21690 17764 22274 18788 21095 16255 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35490000 16534 2155 15674 31406 25165 25165 1 9606 Homo sapiens 0.12461703876556385 LLGASELPIVTPALR Unmodified 1548.9239 0.92392852 1653 A0A7I2V351;A0A7I2V487;Q7Z726;A8K7D9;A0A7I2YQE1;P52292;A0A7I2V3Z3 KPNA2 Importin subunit alpha;Importin subunit alpha-1 yes no 0 0 0 3 0 1 63.214 63.244 3 1.1032E-07 19767 20230619_1882_Aki_TMTPro18x_K_F3 128.76 86.046 40135 38613 42246 41817 34976 49594 44578 47772 49863 44803 38248 38152 46639 37023 42805 51284 36967 38040 37169 35363 42643 42091 37245 49499 44568 48831 50043 45246 40163 39018 47131 38979 43321 50545 35434 36267 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 642040000 16535 1653 15675 31407 25166 25166 1 9606 Homo sapiens 0.1714235088827536 LLGAVQK Unmodified 727.45922 0.4592246 530 A0A024R8P4;Q9BSJ5-3;Q9BSJ5;J3QLV1 C17orf80 Uncharacterized protein C17orf80 yes no 0 0 0 3 0 1 51.148 51.218 2 0.065936 14627 20230619_1882_Aki_TMTPro18x_K_F3 79.027 2.4357 240640 212150 246660 207720 308220 354390 298920 273730 401550 83803 112670 107470 111100 96559 214500 85223 255520 114630 222670 194180 250800 212210 315290 345380 304790 280140 390660 96307 129320 107840 118630 99388 217760 87896 243110 109080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147260000 16536 530 15676 31408 25167 25167 1 9606 Homo sapiens 0.08459336048235855 LLGEGYK Unmodified 778.4225 0.42250475 3121;2158 I6MBV4;A8KAM8;P09619 PDGFRB Receptor protein-tyrosine kinase;Platelet-derived growth factor receptor beta no no 0 0 0 7.5 0.5 1 1 50.071 50.15 2 0.074168 13601 20230619_1887_Aki_TMTPro18x_K_F7 75.311 20.785 910110 772250 799050 885620 1039800 1097500 1116800 1090000 1385800 1191000 1212900 1270800 1368100 1129600 1088300 1560800 944340 1280500 840900 707930 825190 888010 1063300 1093800 1129300 1116600 1389300 1201200 1259400 1282200 1377600 1192300 1106500 1544400 907260 1218000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1238000000 16537 3121;2158 15677 31409;31410 25168;25169 25168 2 9606 Homo sapiens 0.02443039431670968 LLGELHTLR Unmodified 1050.6186 0.61857879 1588 Q15154;Q15154-5;H0YBA1;D3DSQ0;A0A5H1ZRS1;B9EIS5;A2RUU9;Q15154-2;Q15154-4;A0A4W8VX11;E7EV93;Q15154-3;E9PGW9 PCM1 Pericentriolar material 1 protein yes no 0 0 0 4.5 3.5 1 1 49.807 49.843 3 5.4809E-05 13445 20230619_1888_Aki_TMTPro18x_K_F8 144.5 73.585 119500 86039 148040 161300 144390 175290 161860 159150 186870 160580 156220 164980 167550 149400 154690 168220 165760 181730 110640 79391 148070 156740 150800 175650 162970 163780 187700 162410 162290 166720 170100 155610 158210 169470 158600 172410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76004000 16538 1588 15678 31411;31412 25170;25171 25171 2 9606 Homo sapiens 0.09529424605557324 LLGELLLDR Unmodified 1040.623 0.62299547 287 Q9Y376;A0A024R496;Q7Z4X0 CAB39 Calcium-binding protein 39 yes no 0 0 0 7 0 1 63.825 63.854 2 0.0044095 19578 20230619_1887_Aki_TMTPro18x_K_F7 90.919 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16539 287 15679 31413 25172 25172 1 9606 Homo sapiens 0.10430889028475576 LLGELLQDNAK Unmodified 1212.6714 0.67140222 1232 A0A140VK56;P37837-2;P37837;F2Z393 TALDO1 Transaldolase yes no 0 0 0 7 0.816 1 1 1 62.743 62.78 3 0.00018242 19092 20230619_1887_Aki_TMTPro18x_K_F7 112.75 90.55 234900 148910 256200 201890 224800 272720 281360 221220 217470 253040 251700 236830 283890 197310 276980 339890 284790 365840 217070 136910 257750 200520 237410 269120 278430 230520 226730 253480 258060 240100 288090 212670 282590 340430 272970 346910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1882399999.9999998 16540 1232 15680 31414;31415;31416 25173 25173 1 9606 Homo sapiens 0.07357337877715509 LLGEQYYK Unmodified 1012.5229 0.52294707 327 A0A994J414;A0A024R582;J3KMZ8;A0A994J6A8;Q92785;Q92785-2;E9PN04 DPF2 Zinc finger protein ubi-d4 yes no 0 0 0 8 0 1 53.551 53.622 2 0.0023337 15018 20230619_1888_Aki_TMTPro18x_K_F8 140.09 90.374 107800 97608 106790 114800 109050 128320 118220 110250 129830 148130 136080 141550 157560 128480 137080 171040 153040 148550 99742 89478 108660 114700 113400 128330 119030 114920 132010 147470 140300 143560 159130 135210 140820 169840 146250 141350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1661399999.9999998 16541 327 15681 31417 25174 25174 1 9606 Homo sapiens 0.017186516946594566 LLGGHNEDLPSNR Unmodified 1420.7059 0.70589025 2060 A8K4Z6;Q9BRD0;Q9BRD0-2 BUD13 BUD13 homolog yes no 0 0 0 4 0 1 40.383 40.425 3 0.0019455 9740 20230619_1883_Aki_TMTPro18x_K_F4 72.88 55.016 178400 115150 179360 174960 211030 228820 212790 207470 289770 171970 175760 159940 159620 138930 162070 155010 167300 152530 164750 106000 182580 172420 216830 226720 216720 212440 285930 175600 184890 162250 163610 144850 165000 155420 159920 144950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56722000 16542 2060 15682 31418 25175 25175 1 9606 Homo sapiens 0.012365540185328427 LLGGLAVR Unmodified 797.51232 0.51232281 3494 P23396;P23396-2;Q53G83;E9PL09;Q9NQS8;H0YCJ7;A7E2S3;F2Z2S8;H0YF32 RPS3 40S ribosomal protein S3 yes no 0 0 0 4 0.816 1 1 1 53.546 53.582 2 8.089E-09 15263 20230619_1885_Aki_TMTPro18x_K_F5 159.87 40.812 481920 417010 399410 446300 438910 524570 477340 474440 335860 320060 287810 227240 287220 233270 365540 343620 311240 236050 445150 382010 413530 449450 453920 523360 474790 484020 348420 328850 297480 235600 296790 246230 367180 337620 297800 225620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4958800000 16543 3494 15683 31419;31420;31421 25176;25177 25177 2 9606 Homo sapiens 0.10546713830899535 LLGGVTIAQGGVLPNIQAVLLPK Unmodified 2270.3726 0.37258843 3459 P16104;Q96QV6 H2AFX;HIST1H2AA Histone H2AX;Histone H2A type 1-A no no 0 0 0 6.8 0.4 2 8 69.694 69.716 3;4 2.067E-34 20555 20230619_1887_Aki_TMTPro18x_K_F7 206.7 202.34 232930 178830 198890 199800 166020 197940 222320 210190 190290 200160 215790 216930 212220 190660 212300 232610 222210 246740 215040 163940 204380 200140 175990 200260 219890 213690 196640 202780 219940 218460 216470 199670 216520 233600 212640 234110 7 7 8 9 6 6 8 8 8 5 7 7 7 8 8 6 7 8 217750000 16544 3459 15684 31422;31423;31424;31425;31426;31427;31428;31429;31430;31431 25178;25179;25180;25181;25182;25183;25184;25185;25186;25187 25179 10 9606 Homo sapiens 0.28821704282154315 LLGHLVK Unmodified 778.50651 0.50650915 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 3.5 0.5 1 1 48.729 48.787 3 0.0022281 13414 20230619_1883_Aki_TMTPro18x_K_F4 121.68 65.174 1583500 1333700 1376500 1407600 1592300 1881600 1867300 1683500 2056600 704930 621210 476950 658390 489860 1189300 786360 848960 502310 1462900 1221700 1419400 1422300 1645700 1862000 1870800 1707700 2022900 760670 707030 496800 696110 520650 1178900 770900 813170 481370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 441730000 16545 1207 15685 31432;31433 25188 25188 1 9606 Homo sapiens 0.10839615319230234 LLGHWEEAAHDLALACK Unmodified 1932.9516 0.9516166 1242 B4E0U6;A0A140VKA6;P50502;Q0IJ56;Q1XBU6;B7ZA40;H7C3I1;Q8IZP2;D6W507 ST13;ST13P4;hCG_1990625 Hsc70-interacting protein;Putative protein FAM10A4 yes no 0 0 0 7 0.707 1 2 1 66.635 66.668 4 0.012798 25338 20230619_1887_Aki_TMTPro18x_K_F7 63.894 43.231 227200 157210 193860 218750 189360 215270 234060 209230 213860 255590 254370 247650 280010 222910 257410 281540 279180 308390 209630 144520 199810 215740 198280 217760 232790 215510 220840 255490 260200 250980 283780 234000 263490 283390 267110 292520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2441900000 16546 1242 15686 31434;31435;31436;31437 25189;25190 25190 2 9606 Homo sapiens 0.022458860862116126 LLGLGQK Unmodified 727.45922 0.4592246 3605 P49321;Q53H03;P49321-3;Q6PJY7;P49321-2;Q5T626;Q5T624;O95138;E9PI86;E9PPQ8 NASP Nuclear autoantigenic sperm protein yes no 0 0 0 3.5 1.12 1 1 1 1 53.207 53.253 2 0.0046759 15580 20230619_1882_Aki_TMTPro18x_K_F3 146.66 41.718 1743600 1382600 1437800 1565800 1548400 1816100 1497500 1357300 1942900 1565900 1591900 1562300 1753400 1530100 1467100 2169900 2071600 1792700 1609600 1267600 1488300 1569400 1600700 1807200 1526400 1424700 1939600 1572900 1656400 1586600 1772100 1612500 1534000 2147000 1974300 1707800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1569899999.9999998 16547 3605 15687 31438;31439;31440;31441 25191;25192 25191 2 9606 Homo sapiens 0.08459336048235855 LLGLGSASGSVGR Unmodified 1172.6513 0.65133548 4438 Q9BU76;Q9BU76-4;Q9BU76-3 MMTAG2 Multiple myeloma tumor-associated protein 2 yes no 0 0 0 4 0 1 52.045 52.069 2 2.4341E-10 14929 20230619_1883_Aki_TMTPro18x_K_F4 175.43 132.6 66863 58851 69350 64461 67542 76503 72581 72295 87921 80479 78581 82637 86609 78118 76628 84255 85846 96271 61875 53919 70186 64835 70462 76367 73377 74357 88336 80990 81440 83620 87706 81059 78649 85223 82120 91273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97240000 16548 4438 15688 31442 25193 25193 1 9606 Homo sapiens 0.07191586937778993 LLGLPFIAGPVDIR Unmodified 1479.8813 0.88133542 4210 Q8IXT5;B9ZVT1;E5RHG1;E5RJ83;E5RJV8 RBM12B RNA-binding protein 12B yes no 0 0 0 4.5 0.5 1 1 65.655 65.683 3 9.4393E-07 20437 20230619_1885_Aki_TMTPro18x_K_F5 95.183 66.457 10033 7107.2 10923 9395 8651.6 8996.7 10327 11403 10747 8106.2 11105 12164 9874.9 7388.5 10066 10413 10622 11372 9276.1 6529.1 10977 9301.7 9202.7 9182.3 10338 11395 10923 8487.8 11331 12006 10120 7940.8 10266 10467 10163 10788 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37444000 16549 4210 15689 31443;31444 25194 25194 1 9606 Homo sapiens 0.16059000550671954 LLGLYHTMDK Unmodified 1189.6165 0.61652988 2127 A8K8X0;Q14CX7-2;Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes no 0 0 0 2 0 1 54.69 54.714 3 0.00048016 16453 20230619_1881_Aki_TMTPro18x_K_F2 103.18 79.505 63084 49786 65556 57454 52208 62306 59123 64807 71922 65064 68721 60874 77027 59501 65115 83188 69976 72036 58338 45654 66137 57499 55520 62691 59658 66018 72406 65628 70959 62023 77746 62692 66793 82535 66920 68531 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37254000 16550 2127 15690 31445 25195 25195 1 9606 Homo sapiens 0.029306278054491486 LLGMGDIEGLIDK Unmodified 1372.7272 0.72720254 1672 A0A7P0PJI2;A0A7I2V5K0;P61011;G3V4F7;G3V480;B4DDS7;P61011-2;A0A7I2V584 SRP54 Signal recognition particle 54 kDa protein yes no 0 0 0 6.5 0.5 1 1 64.659 64.695 3 0.015506 19960 20230619_1887_Aki_TMTPro18x_K_F7 62.14 39.42 124390 109570 111690 116500 110720 111370 120980 115100 122470 129480 117600 126820 144580 115510 115020 145910 141960 142290 114970 100360 114510 117090 115280 113180 121450 117750 124600 129990 122120 128470 145270 121170 119140 145850 135570 135180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 242560000 16551 1672 15691 31446;31447 25196 25196 1 9606 Homo sapiens 0.055748030030144946 LLGNTFVALSDLR Unmodified 1417.7929 0.79291434 731 P46379-3;P46379;P46379-2;A0A7I2V508;A0A0G2JK23;A0A024RCR6;A0A1U9X7A6;A0A1U9X7A9;A0A7P0MQS5;P46379-5;A0A0G2JL47;P46379-4;X6REW1;A0A0G2JJM1;F6S6P2 BAG6;BAT3 Large proline-rich protein BAG6 yes no 0 0 0 3 0 1 64.097 64.127 3 0.022651 20192 20230619_1882_Aki_TMTPro18x_K_F3 56.569 36.405 7641.7 4523.4 7476.5 7907.8 7752.7 7554.6 8202.1 8940.7 10619 8178.7 10194 10422 9128.9 8856.2 11142 7567.3 9513.7 10886 7052.6 4173.5 7614 7700.3 8039 7695 8321.2 9017.5 10652 8377.2 10438 10422 9451.5 9117.8 11185 7823.5 9127.9 10299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40662000 16552 731 15692 31448 25197 25197 1 9606 Homo sapiens 0.10072960240222528 LLGPDAAINLTDPDGALAK Unmodified 1863.9942 0.99419293 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4H4;A0A7I2V4Y9;B3KTX4;A8K8J9;F8W1I6;H0YI98;A0A7I2V390;F8VW18 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 0 0 6 0 1 63.175 63.224 3 0.011285 19589 20230619_1886_Aki_TMTPro18x_K_F6 56.851 42.379 58997 65123 62795 73215 65820 93910 74166 80419 75894 69571 66461 74396 103570 60276 86305 73652 62735 63706 54701 59638 63615 73538 68497 93032 74368 82776 76883 71041 70325 74811 103470 63458 86688 73296 60259 60610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 272480000 16553 1406 15693 31449 25198 25198 1 9606 Homo sapiens 0.09675559695392622 LLGPNASPDGLIPWTR Unmodified 1705.9152 0.91515474 1598 P42224;P42224-2;A0A669KB53;A0A669KBA4;A0A669KB56;A0A669KB68;A0A8V8TN81;A0A669KBI6;J3KPM9;A0A669KB52;A0A669KB75 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription yes no 0 0 0 3 0 1 63.213 63.243 2 1.9247E-08 19797 20230619_1882_Aki_TMTPro18x_K_F3 177.81 119.54 31391 27076 32244 33226 29820 32868 31688 35285 33217 35856 38514 38210 45904 36231 40075 47691 41950 44444 29043 24836 32650 33054 31210 33321 31919 35890 33986 36268 39590 38647 46316 38052 41000 47536 40136 42238 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75749000 16554 1598 15694 31450 25199 25199 1 9606 Homo sapiens 0.09043377251782658 LLGPSAAADILQLSSSLPLQSR Unmodified 2236.2427 0.24269647 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 5 0 1 65.941 65.984 3 4.067E-31 20570 20230619_1885_Aki_TMTPro18x_K_F5 213.03 196.73 12534 7256.3 7892.6 16938 14082 10978 14621 20622 18732 19736 16400 16258 17563 11311 13118 15055 22836 14474 11533 6727.5 8548 16209 14133 11767 14840 20360 18775 19866 16979 16485 17664 12049 13960 15031 21697 13784 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 507730000 16555 594 15695 31451 25200 25200 1 9606 Homo sapiens 0.17402483212299558 LLGPVLVK Unmodified 837.56878 0.56877505 3236 Q5STK2;O15212;I7HJT1;A2AB88 PFDN6;HKE2 Prefoldin subunit 6 yes no 0 0 0 4.5 0.5 1 1 60.23 60.257 2;3 0.001077 18010 20230619_1885_Aki_TMTPro18x_K_F5 132.22 72.065 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16556 3236 15696 31452;31453 25201;25202 25202 2 9606 Homo sapiens 0.14349341667571025 LLGQFSEK Unmodified 920.49673 0.49673232 1174 P53004;A0A140VJF4 BLVRA Biliverdin reductase A yes no 0 0 0 5.33 3.09 1 1 1 55.021 55.085 2;3 0.0020825 15710 20230619_1888_Aki_TMTPro18x_K_F8 149.91 86.612 135130 108820 128710 147080 158980 177060 156490 148550 175380 162570 171600 157710 184710 154820 162400 186270 182380 184060 124890 99940 131860 145710 162710 176090 158490 154120 177460 163480 176710 160330 187040 161480 166770 186490 174320 174840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 360790000 16557 1174 15697 31454;31455;31456 25203;25204 25204 2 9606 Homo sapiens 0.0333038252319966 LLGQFTLIGIPPAPR Unmodified 1591.945 0.94499831 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;A1XP52;H0Y8S0 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 7 0.707 1 2 1 64.558 64.589 2;3 1.1084E-10 19879 20230619_1887_Aki_TMTPro18x_K_F7 156.24 139.3 271390 281180 317880 313720 237350 292210 371090 285700 393690 345880 350310 351440 413480 360940 331670 366150 374800 397110 251720 257530 317920 314010 256530 297020 366920 294270 397890 346720 364210 356810 416200 372320 341270 369540 358340 376770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1914699999.9999998 16558 1488 15698 31457;31458;31459;31460 25205;25206 25205 2 9606 Homo sapiens 0.17270360987799904 LLGQIVDR Unmodified 912.53927 0.53926584 507 A0A024R8A7;Q96I24;Q96I24-2 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 0 0 0 7.5 0.5 1 1 53.524 53.594 2 0.017679 15121 20230619_1888_Aki_TMTPro18x_K_F8 100.02 57.148 198050 180550 204690 205240 207070 252530 246980 222310 244470 243220 230770 218220 223610 182180 253180 225420 200550 191840 183310 165460 207480 205910 216070 251050 246590 229790 248710 243930 237140 221430 229720 191400 253870 224080 192330 182600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 286310000 16559 507 15699 31461;31462 25207 25207 1 9606 Homo sapiens 0.07949777651424483 LLGSAGSNKEEK Unmodified 1231.6408 0.64083038 3012 G3V5V3;O60524-4;O60524-5;O60524-3;O60524;O60524-2 NEMF Nuclear export mediator factor NEMF yes no 0 0 1 7 0 1 42.836 42.911 3 6.1768E-05 10443 20230619_1887_Aki_TMTPro18x_K_F7 118.31 75.976 70917 56607 64820 74787 98027 95669 93364 92531 114340 85911 97878 83138 86619 70773 86610 64415 103520 68108 65519 51978 66910 74285 99008 95098 95005 94545 114540 87149 100610 84113 88761 73100 88862 65134 98643 64780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18160000 16560 3012 15700 31463 25208 25208 1 9606 Homo sapiens 0.0342755949268394 LLGSASPSSSVR Unmodified 1159.6197 0.619701 2433 B3KWQ6;P41219;P41219-2 PRPH Peripherin yes no 0 0 0 3.5 2.69 1 1 1 1 43.727 43.778 2 2.0779999999999998E-32 11523 20230619_1881_Aki_TMTPro18x_K_F2 290.68 231.7 705900 548300 573090 553810 545000 625180 673280 592180 779290 359490 393350 348290 369070 299080 648130 428560 499180 311210 651510 502240 592730 560220 572390 626200 674250 601340 770960 376270 421030 353000 390730 316850 644640 422770 477750 297520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2198700000 16561 2433 15701 31464;31465;31466;31467 25209;25210;25211 25209 3 9606 Homo sapiens 0.04627594183830297 LLGSQPS Unmodified 700.37555 0.37555455 187;2630 Q9UHD9;B4DZF1;A0A024R258;B3KNI8;B3KNI2;Q9UMX0-2;Q9UMX0;Q9UMX0-3 UBQLN2;UBQLN1 Ubiquilin-2;Ubiquilin-1 no no 0 0 0 5.5 0.5 1 1 48.643 48.721 2 0.060078 13188 20230619_1885_Aki_TMTPro18x_K_F5 81.672 76.818 35082 25079 37994 42081 39290 47441 38256 42264 54666 47727 45400 43485 46894 43961 43019 40359 49762 41863 32436 23105 38399 41137 40735 47412 39152 43668 54390 47842 47063 44335 47665 45132 44165 40720 47492 39775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48315000 16562 2630;187 15702 31468;31469 25212 25212 1 9606 Homo sapiens 0.013381798805312428 LLGSTIPLCSAQWER Unmodified 1729.8821 0.88214006 337 A0A024R5F4;P50416;B2RAQ8;P50416-2;H3BMD2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 0 3 0 1 62.195 62.224 2 4.8087E-05 19331 20230619_1882_Aki_TMTPro18x_K_F3 133.32 114.01 39716 36613 43939 40622 51654 57085 63401 54122 69410 41966 44576 40310 48223 36356 48492 47053 46960 47295 36786 33544 44397 40933 53339 56409 63371 55177 69287 43071 47051 40905 49091 38225 49212 47130 44948 44917 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50173000 16563 337 15703 31470 25213 25213 1 9606 Homo sapiens 0.04639427137408347 LLGTIYTAAEEIEAVGGK Unmodified 1833.9724 0.97239485 129 B2R923;A0A024R159;Q6YN16-2;Q6YN16 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes no 0 0 0 7 0 1 67.075 67.098 3 4.2951E-07 20945 20230619_1887_Aki_TMTPro18x_K_F7 115.1 104.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16564 129 15704 31471 25214 25214 1 9606 Homo sapiens 0.08876754946822984 LLGVFEQNQDRK Unmodified 1445.7627 0.76267685 4352 Q96G61 NUDT11 Diphosphoinositol polyphosphate phosphohydrolase 3-beta yes yes 0 0 1 1 0 1 53.561 53.561 3 0.060091 15858 20230619_1880_Aki_TMTPro18x_K_F1 44.829 27.097 66720 53387 63270 61269 51655 73273 62279 66876 67271 70385 75629 74295 75500 64140 88593 82933 132630 74126 61659 48951 64388 61407 54997 73003 62383 68839 68591 71054 77228 74933 77748 67474 92225 82571 126070 70713 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43809000 16565 4352 15705 31472 25215 25215 1 9606 Homo sapiens 0.057626015750201987 LLGWIQNK Unmodified 970.56 0.56000128 3484;3299;3886 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98;Q14315;Q14315-2;O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;A0A804HJC2 FLNA;FLNC;FLNB Filamin-A;Filamin-C;Filamin-B no no 0 0 0 5 0 1 62.252 62.3 2 3.8769E-06 18934 20230619_1885_Aki_TMTPro18x_K_F5 172.39 129.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16566 3484;3886;3299 15706 31473 25216 25216 1 9606 Homo sapiens 0.0735436803107632 LLHAGFK Unmodified 784.45956 0.45955895 2771 CON__P00735 yes yes 0 0 0 3.5 0.5 1 1 45.504 45.564 3 0.00183 11955 20230619_1883_Aki_TMTPro18x_K_F4 132.72 0 + 95726 75780 115640 135410 304360 358370 237330 223360 469470 958750 1873700 2883400 600110 1227600 1493000 1013500 1310200 1790600 88650 69848 118880 134470 300000 342330 251040 257930 519830 985820 1808100 2778000 699320 1305300 1490100 1067300 1258700 1690700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1170600000 16567 2771 15707 31474;31475 25217;25218 25218 2 9606 Homo sapiens 0.05870755768080471 LLHDEQSTDDSR Unmodified 1414.6325 0.63245054 2857 Q3V6T2;D6W5D1;Q3V6T2-2;A0A2U3TZV9;A0A2R8Y7B1;A0A2R8YG73;A0A2R8Y4X4;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y885;A0A2R8YDS8;A0A2R8Y7D4;H7C2C6 CCDC88A;KIAA1212 Girdin yes no 0 0 0 1 0 1 34.147 34.147 3 8.0337E-10 7659 20230619_1880_Aki_TMTPro18x_K_F1 167.71 153.45 11676 5913.5 10517 11266 14600 12521 12251 15058 16911 14955 16759 16324 16522 18151 14084 19192 22047 23803 10762 5467.7 10840 10949 14762 12624 12638 15193 16955 15167 17184 16583 16793 18708 14832 19511 21030 22553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23741000 16568 2857 15708 31476 25219 25219 1 9606 Homo sapiens -0.058280392146116355 LLHDLQIGEK Unmodified 1164.6503 0.65027285 3611 P49756;P49756-2;P49756-3;E9PQU5 RBM25 RNA-binding protein 25 yes no 0 0 0 6.5 0.5 1 1 53.342 53.414 3 1.9023E-05 15103 20230619_1887_Aki_TMTPro18x_K_F7 144.7 98.273 380480 209700 315980 384120 344110 395780 403960 404810 474840 449170 439730 402810 479380 387760 395680 493930 406200 470030 350610 193680 327230 373390 357170 399210 405950 414100 478360 450240 454220 410760 483860 406230 404980 493020 388990 446450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1581499999.9999998 16569 3611 15709 31477;31478 25220;25221 25221 2 9606 Homo sapiens 0.07453372568852501 LLHDQIEK Unmodified 994.54475 0.54474515 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 4.5 0.5 1 1 43.287 43.35 3 0.00037319 10978 20230619_1883_Aki_TMTPro18x_K_F4 144.5 87.768 252590 141180 225110 250870 280030 277860 268810 258520 339750 289170 327460 304070 333290 269250 285920 359540 357310 314740 232890 130330 231900 244490 286150 278400 273830 266300 341470 291200 336590 307070 337700 283640 295900 357140 340890 299580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 401440000 16570 3440 15710 31479;31480 25222;25223 25222 2 9606 Homo sapiens 0.04725456443236453 LLHDQVGVIQFGPYK Unmodified 1712.925 0.92499115 3647 P53621;P53621-2;A0A3B3IS84;A0A3B3ISC6 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 3 0 1 59.127 59.157 3 0.013798 18109 20230619_1882_Aki_TMTPro18x_K_F3 61.409 21.396 24576 18228 20549 22633 29666 26570 24338 30508 31674 25708 17591 21724 28267 16356 21321 16897 19076 20691 22681 16731 21349 22552 29925 26672 25078 30737 31316 26115 19203 22017 28128 17125 21652 17200 18284 19607 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101510000 16571 3647 15711 31481 25224 25224 1 9606 Homo sapiens 0.09704565257152353 LLHENHLK Unmodified 1002.5611 0.56106391 1714 A0A7P0TBI1;A0A7P0TBC5;Q4KMQ2-3;Q4KMQ2;Q4KMQ2-2 ANO6 Anoctamin-6 yes no 0 0 0 7.5 0.5 1 1 37.055 37.08 4 0.00084481 8090 20230619_1887_Aki_TMTPro18x_K_F7 121.09 83.543 116070 20123 91479 119340 159620 115160 143840 142390 187900 135110 181290 195420 169370 157600 147830 183560 182630 200170 106610 19426 96107 112080 159630 117330 147210 143430 188440 138840 185850 194410 172340 165100 152830 184870 174520 189880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 101340000 16572 1714 15712 31482;31483 25225;25226 25225 2 9606 Homo sapiens 0.05988582399993447 LLHIEELR Unmodified 1021.592 0.59202969 4012 Q5RLJ0;Q549M8;Q9Y224 C14orf166 UPF0568 protein C14orf166 yes no 0 0 0 5.5 0.5 1 1 48.696 48.773 3 1.5071E-07 13202 20230619_1885_Aki_TMTPro18x_K_F5 208.86 104.41 428350 243300 471040 467960 443060 432330 445840 498440 559860 540660 483550 492450 569440 485490 468420 575300 518110 569780 395660 224840 474390 453440 462100 441200 453190 505640 561180 542690 503450 501890 573710 505850 481450 576070 495600 541050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 527180000 16573 4012 15713 31484;31485 25227;25228 25227 2 9606 Homo sapiens 0.08209735714217459 LLHNHLR Unmodified 901.52462 0.52461883 1149 O75122-3;E7EW49;O75122;E7ERI8;A0A804HJG7;A0A0U1RQI6;J3KR49;E3W994;B4DM73;Q96F87;H7C4I5;Q6N029 CLASP2;DKFZp686D11262 CLIP-associating protein 2 yes no 0 0 0 3 0 1 30.015 30.108 3 0.0054157 5640 20230619_1882_Aki_TMTPro18x_K_F3 99.919 40.938 28714 21353 28034 31562 36357 38631 38900 43820 44981 30963 36415 39690 36133 28795 37080 30225 39530 33478 26531 19637 28686 31120 37166 38629 39258 44043 45088 32252 37783 39517 36923 30144 37782 30561 37757 31786 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3305700 16574 1149 15714 31486 25229;25230 25229 2 9606 Homo sapiens 0.06991750293934729 LLHSENYVTK Unmodified 1202.6295 0.62953741 287 Q9Y376;A0A024R496;Q7Z4X0 CAB39 Calcium-binding protein 39 yes no 0 0 0 7.5 0.5 1 1 44.27 44.32 3 3.6353E-07 11236 20230619_1888_Aki_TMTPro18x_K_F8 175.49 123 84746 52795 75262 85488 80431 92649 93906 86300 98634 106960 123990 112000 122530 99725 98143 135590 126200 117840 78173 48647 77395 83683 83539 92946 94048 89182 101230 107130 125850 113160 123920 105160 101980 134580 120410 112140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166600000 16575 287 15715 31487;31488 25231 25231 1 9606 Homo sapiens 0.03632782189174577 LLHTLEGHAMPIR Unmodified 1486.8079 0.8078529 3059 H0YN81;Q9GZS3;H0YL19;H0YLA1;H3BQA8 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes no 0 0 0 2 0 1 48.13 48.201 4 1.7288E-15 13588 20230619_1881_Aki_TMTPro18x_K_F2 203.61 173.81 54328 26546 45637 53284 51485 62164 56942 58898 67472 59521 56417 54616 60511 46971 52124 62322 62576 57423 50043 24571 47226 51673 53239 62045 57415 60399 67697 59985 58566 55424 61214 49536 53782 62077 59736 54611 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 483090000 16576 3059 15716 31489 25232 25232 1 9606 Homo sapiens 0.08392128836567281 LLHVAVSDVNDDVRR Unmodified 1706.9064 0.90638097 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;Q05BX4;A0A7I2V4X0;A0A7I2YQI9 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 1 5.5 0.5 1 1 46.041 46.123 4 5.6355E-25 12155 20230619_1886_Aki_TMTPro18x_K_F6 172.09 144.44 94856 66976 80750 100690 110880 185010 106790 106090 248360 89495 95799 90188 89858 76392 99975 97574 93841 88930 87528 61620 83860 99856 113520 178630 112080 113350 238360 91818 105130 91116 92454 80362 101130 97246 89811 84576 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1232500000 16577 832 15717 31490;31491 25233;25234 25234 2 9606 Homo sapiens 0.0812040361529398 LLIAAQK Unmodified 755.49052 0.49052473 1421;2318 E5RHW4;A0A384ME54;O94905;E5RJ09;B2RDK6;O75477;B4DPN7;B0QZ43 ERLIN2;ERLIN1 Erlin-2;Erlin-1 no no 0 0 0 3 0 1 51.887 51.952 3 0.025295 15011 20230619_1882_Aki_TMTPro18x_K_F3 77.944 30.899 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16578 1421;2318 15718 31492 25235 25235 1 9606 Homo sapiens 0.10299909082323211 LLIDEAILK Unmodified 1026.6325 0.63249752 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 0 6 0 1 62.947 62.995 3 0.0026734 19452 20230619_1886_Aki_TMTPro18x_K_F6 86.136 30.752 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16579 3609 15719 31493 25236 25236 1 9606 Homo sapiens 0.12024657313986609 LLIEMEQR Oxidation (M) 1046.543 0.54303059 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;H0YJG0 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 1 0 3.5 1.12 1 1 1 1 46.447 46.517 2 0.01408 12519 20230619_1882_Aki_TMTPro18x_K_F3 90.37 31.765 575140 512200 479900 651340 546840 484110 555430 562750 558110 637320 740280 703280 673760 556780 702640 731080 674290 719400 531380 469930 497280 644000 562130 504430 559860 571830 575890 641720 747940 706290 690840 588390 712620 731150 645740 683250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1565099999.9999998 16580 3441 15720 31494;31495;31496;31497 25237;25238 25237 2076 2 9606 Homo sapiens 0.021620793629836044 LLIEMEQR Unmodified 1030.5481 0.54811597 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;H0YJG0 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 0 4.5 1.12 1 1 1 1 55.204 55.253 2 0.00056579 16314 20230619_1883_Aki_TMTPro18x_K_F4 161.11 112.87 2051100 1762900 1957800 2129000 1234800 1628000 1801000 1791800 1820500 2381300 2384700 2422500 2629200 2298600 2489500 2661500 2722500 2728500 1896500 1616800 1986900 2113900 1357000 1688000 1785400 1836000 1878200 2375100 2431500 2453100 2669300 2394300 2547700 2672100 2602700 2590800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1961199999.9999998 16581 3441 15720 31498;31499;31500;31501 25239;25240;25241 25239 3 9606 Homo sapiens 0.03406383225592435 LLIGTLYHR Unmodified 1084.6393 0.63931423 1048 B4DKM6;B4DW02;A0A0J9YXF2;Q15165-3;Q15165-1;Q15165 PON2 Serum paraoxonase/arylesterase 2 yes no 0 0 0 6 0 1 52.225 52.302 3 5.8056E-05 14920 20230619_1886_Aki_TMTPro18x_K_F6 144.09 69.916 10723 7485.5 10432 10107 11710 14281 11304 12656 16275 10317 12482 13235 13599 10880 10343 13716 12890 13750 9903.8 6878.7 10640 10045 12072 14079 11576 12973 16127 10653 13033 13230 13689 11451 10735 13730 12315 13057 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15643000 16582 1048 15721 31502 25242 25242 1 9606 Homo sapiens 0.10038014985207155 LLIHQSLAGGIIGVK Unmodified 1517.9293 0.92934824 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 6 0 1 58.583 58.649 3 3.5673E-28 17557 20230619_1886_Aki_TMTPro18x_K_F6 218.68 188.91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16583 1865 15722 31503 25243 25243 1 9606 Homo sapiens 0.1911007447074553 LLIIGTTSR Unmodified 972.59678 0.59678072 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;A0A994J5C5;A0A994J855;A0A994J5Y2;Q96D47;D3DXJ4;I3L2G1;A0A0J9YXN6 NSF Vesicle-fusing ATPase yes no 0 0 0 4.5 0.5 1 1 54.559 54.601 2 0.00072728 15649 20230619_1885_Aki_TMTPro18x_K_F5 125.53 98.275 133160 111340 110670 129790 115190 140230 143570 142010 167260 87655 80009 72715 82123 65731 113590 86295 86442 75684 122980 102090 114510 129710 120230 141020 143750 143520 165310 91184 86327 74342 85236 69141 113300 85889 82895 72037 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 244480000 16584 1435 15723 31504;31505 25244 25244 1 9606 Homo sapiens 0.10938619856983678 LLILALER Unmodified 939.6117 0.6117025 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 3 0 1 63.476 63.507 2 0.0017808 19891 20230619_1882_Aki_TMTPro18x_K_F3 137.18 94.211 134200 102120 111070 120050 115740 147060 135290 135800 177740 92658 86260 72443 70023 73495 139180 77428 79531 69602 123860 93671 114900 120130 120650 146340 136510 138330 174730 95527 92141 74558 75353 75931 136680 77524 76602 66228 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75032000 16585 1863 15724 31506 25245 25245 1 9606 Homo sapiens 0.13948111724982937 LLINDFGR Unmodified 946.52362 0.52361577 2407 H0YAE8;E7EUV9;Q53XR2;B3KST9;F8W8D3;Q14493;H7C4H8;B3KSC5;B4DUW7;Q14493-2 SLBP Histone RNA hairpin-binding protein yes no 0 0 0 8 0 1 56.672 56.729 2 0.036383 16480 20230619_1888_Aki_TMTPro18x_K_F8 82.279 66.617 107400 83309 99467 92785 55179 76590 82235 76314 109240 112160 109370 101330 125100 104780 95574 132320 106910 98605 99214 76375 101000 92775 61738 78679 82239 78990 109780 111130 112800 103530 125770 109390 98535 130540 102130 94043 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62004000 16586 2407 15725 31507 25246 25246 1 9606 Homo sapiens 0.048214911343848144 LLIPVAEGMNEIWLR Unmodified 1752.9597 0.9596621 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 2 0 1 65.844 65.851 3 2.7084E-14 21164 20230619_1881_Aki_TMTPro18x_K_F2 185.2 167.29 3992.8 3002 3312.1 4911 3906.4 6280.5 4733.7 7130.6 6123.5 5297.3 4322.7 4867.2 5946.5 3851.1 5768.3 5978.3 6483.3 7731 3685 2764.1 3443 4816.3 4052.3 6256.2 4770.7 7166.9 6089.3 5436.5 4596 4927.6 6003 4128.4 5909.5 6068.8 6204.9 7319.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30300000 16587 385 15726 31508 25247 25247 1 9606 Homo sapiens 0.11330065073616424 LLISGFDR Unmodified 919.51272 0.51271674 4808 yes no 0 0 0 7.5 0.5 2 2 50.015 50.094 2 0.0085142 13605 20230619_1888_Aki_TMTPro18x_K_F8 104.45 30.032 + 999940 731090 965860 970650 605480 874100 930500 896970 232340 1058600 989990 1234600 1377400 1052600 884640 1488900 1500800 1233700 923740 671570 978820 959390 666050 891160 899270 919590 309950 1064400 998670 1239100 1369600 1114800 945420 1473100 1428200 1175500 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 677770000 16588 4808 15727 31509;31510;31511;31512 25248;25249 25249 2 9606 Homo sapiens 0.04974088760093309 LLIVSTTPYSEK Unmodified 1349.7442 0.74423282 4699 Q9Y230;B3KNL2;Q9Y230-2;M0R0Y3 RUVBL2 RuvB-like 2 yes no 0 0 0 3.67 3.09 1 1 1 59.484 59.49 3 3.0609E-06 18414 20230619_1881_Aki_TMTPro18x_K_F2 143 129.09 133180 117850 133020 146650 122930 152620 143830 143490 145630 166710 178810 162100 174590 157440 172640 189750 175770 212610 123210 108100 135100 145800 129160 153630 143930 147860 149650 167080 181630 164720 178270 164290 175870 191380 168400 201560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 599200000 16589 4699 15728 31513;31514;31515 25250;25251;25252 25251 3 9606 Homo sapiens 0.08335046880438313 LLLAIVGQ Unmodified 825.53239 0.53238955 2493 B4DT77;B4DWU2;B4DHY4;Q53HM8;P20073-2;P20073;B2R7L2;B2R657 ANXA7 Annexin;Annexin A7 yes no 0 0 0 3.5 0.5 1 1 66.891 66.918 2 0.0011393 21306 20230619_1882_Aki_TMTPro18x_K_F3 148.12 145.54 25892 24432 28086 30450 26331 29297 34293 34044 37821 26993 32593 30694 29123 29146 40818 31429 35033 33838 23982 22407 28342 30248 27696 29819 34221 34270 38068 27785 33550 30962 30417 30218 40929 31715 33567 32119 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86105000 16590 2493 15729 31516;31517 25253;25254 25253 2 9606 Homo sapiens 0.112644647708521 LLLCGGAPLSATTQR Unmodified 1556.8345 0.83446158 284 B3KN05;A0A7P0TA76;B2RBE0;A0A024R487;O95573;A0A7P0TBB1;B3KMA6;A0A7P0T8L6;A0A7P0TB52;A0A7P0T905 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes no 0 0 0 5 0 1 56.158 56.22 3 0.0098261 16340 20230619_1885_Aki_TMTPro18x_K_F5 59.884 47.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16591 284 15730 31518 25255 25255 1 9606 Homo sapiens 0.07831772937242931 LLLDPEFTLLQR Unmodified 1456.829 0.8289655 2306 Q659C9;Q9NVU3;B2RCJ6;Q9BZH6;Q9NWV7 DKFZp434L1715;WDR11 WD repeat-containing protein 11 yes no 0 0 0 8 0 1 64.683 64.703 2 2.2205E-05 19824 20230619_1888_Aki_TMTPro18x_K_F8 139.43 89.31 33868 26517 30823 34258 29194 30070 31611 35143 38992 37523 36491 41384 48324 41911 44356 50753 45651 54557 31285 24344 31555 33909 30520 30846 31978 35614 39223 37914 38115 41864 48764 43686 45283 51051 43727 51746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19195000 16592 2306 15731 31519 25256 25256 1 9606 Homo sapiens 0.11882417417086799 LLLDPSSPPTK Unmodified 1166.6547 0.65468953 2962 H0YFI1;F5H479;F5GX19;F5H3Y3;Q6IAA8 LAMTOR1 Ragulator complex protein LAMTOR1 yes no 0 0 0 8 0 1 55.757 55.819 3 0.00033658 16072 20230619_1888_Aki_TMTPro18x_K_F8 99.522 79.736 79431 64416 74685 87227 78679 104450 97563 102120 107340 95035 85223 101810 92379 84891 96281 90567 99368 100440 73407 59160 76435 86411 82062 104180 97562 104270 107920 96638 88940 102400 94299 88410 97972 91503 95052 95290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120720000 16593 2962 15732 31520 25257 25257 1 9606 Homo sapiens 0.07802836991754702 LLLDQEQK Unmodified 985.54441 0.5444108 3321 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 0 4.5 0.5 2 2 51.133 51.185 2;3 0.0051314 14267 20230619_1885_Aki_TMTPro18x_K_F5 90.657 38.802 148970 117610 147230 157300 153390 171730 170660 154500 195110 162280 179560 175030 188670 165640 166090 200490 183020 175530 137710 108010 149870 155740 159340 172140 171790 159310 196660 164090 185320 176890 191250 172940 170410 199430 174900 167010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 352340000 16594 3321 15733 31521;31522;31523;31524 25258;25259 25259 2 9606 Homo sapiens 0.05106036723384477 LLLDTFEYQGLVK Unmodified 1537.8392 0.83919583 4179 Q7Z7K6;Q7Z7K6-3;A0A0M3HER2 CENPV Centromere protein V yes no 0 0 0 8 0 1 64.532 64.553 3 0.00096544 19758 20230619_1888_Aki_TMTPro18x_K_F8 85.845 65.182 24577 22135 26729 23106 21368 18863 22591 20741 19233 19484 21052 24875 25121 22558 23348 22219 24901 27903 22757 20270 26860 23225 22596 19467 22624 21046 19866 19917 21726 24918 25432 23328 23852 22658 23831 26431 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77987000 16595 4179 15734 31525 25260 25260 1 9606 Homo sapiens 0.09178980351612154 LLLEDLVK Unmodified 941.57973 0.57973367 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8;B4DIG6;B4DWK9;B4DIW1;B4DK31;B4DIR2 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 7 0 1 63.296 63.329 2 0.012282 19366 20230619_1887_Aki_TMTPro18x_K_F7 95.909 51.774 125440 113540 139040 116740 94744 99535 116160 106660 116870 158400 135750 129530 148130 133540 136900 176880 146070 159930 116170 103960 139280 117540 102390 102230 116010 109900 120000 156370 138910 132980 150310 139890 140150 175980 139760 152040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58751000 16596 3833 15735 31526 25261 25261 1 9606 Homo sapiens 0.10660699251184269 LLLENYEEYAAR Unmodified 1482.7355 0.73545904 3170 K7EPJ1;Q16763 UBE2S Ubiquitin-conjugating enzyme E2 S yes no 0 0 0 5 0 1 61.041 61.091 2 0.00015832 18350 20230619_1885_Aki_TMTPro18x_K_F5 114.86 96.702 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16597 3170 15736 31527 25262 25262 1 9606 Homo sapiens 0.013400732440004504 LLLETHLPSK Unmodified 1149.6758 0.67575932 2138 A8K9K6;O00567;A0PJ92;A0A494C128;Q5JXT2 NOP56 Nucleolar protein 56 yes no 0 0 0 1.5 0.5 2 2 53.296 53.312 3;4 1.1961E-05 15899 20230619_1881_Aki_TMTPro18x_K_F2 156.12 128.79 84734 67167 70368 90932 74664 85520 85054 88056 92125 97330 97337 101780 108600 92159 91548 116610 112650 123760 78226 61692 72871 89769 77552 86927 85390 90046 93710 97986 100140 102820 109690 96691 94699 117100 107650 117430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 769470000 16598 2138 15737 31528;31529;31530;31531 25263;25264 25264 2 9606 Homo sapiens 0.10690847091291289 LLLEYTDSSYEEK Unmodified 1588.7508 0.75083434 1487 P28161;A0A384P5E9;P28161-2;F6XZQ7;Q0D2I8;E9PHN6;A8HT81;E9PHN7;E9PLF1;A0A0A0MR85;X5DNN9;Q03013-3;Q03013;P09488-2;Q03013-2;X5DR03;A0A140VKE3;P09488;E7EWW9;X5D932;H3BQT3;B9ZVX7;X5D7U4 GSTM2;GSTM4;GSTM1 Glutathione S-transferase Mu 2;Glutathione S-transferase Mu 4;Glutathione S-transferase Mu 1 yes no 0 0 0 2.5 0.5 1 1 61.477 61.497 3 1.2062E-17 19028 20230619_1882_Aki_TMTPro18x_K_F3 179.35 152.81 80447 65581 75441 84971 84835 102720 83478 82112 83964 83654 94974 100040 87000 91401 102330 98406 108520 145970 74348 60200 77258 84414 87410 102020 84290 85372 85953 84977 96658 100520 89900 94936 104120 101430 104030 138000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 267060000 16599 1487 15738 31532;31533 25265 25265 1 9606 Homo sapiens -0.01999104749484104 LLLGAGAVAYGVR Unmodified 1258.7398 0.73975656 4405 Q99623;F5GY37;Q99623-2;J3KPX7;F5GWA7;B4DW05;A0A976LZI3;A0A7I2V5F0;F5H3X6;F5H2D2;A0A3G2KQ93;F5H0C5 PHB2 Prohibitin-2 yes no 0 0 0 5.5 0.5 1 1 60.426 60.481 3 1.9870999999999998E-21 18300 20230619_1886_Aki_TMTPro18x_K_F6 187.42 146.57 43935 40050 33116 34629 54062 71585 45917 52824 80124 13902 13386 14528 17022 12186 25105 18744 16028 13720 40571 36621 34881 35918 54475 69131 47765 54169 76822 16304 17053 14685 17654 12996 24848 18471 15407 13093 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 217090000 16600 4405 15739 31534;31535 25266;25267 25267 2 9606 Homo sapiens 0.12073627248219054 LLLIGDSGVGK Unmodified 1070.6336 0.63356015 3725;4495;3687;452;3060;646 P61026;Q53SX4;A0A2R8YDI9;G5ELZ6;G5ELZ5;D3DV69;G5EMR8;G3V196;A0A2R8YFB8;P59190-2;P59190;Q5U0I6;P62820;B7Z8M7;E7END7;P62820-2;P62820-3;Q9H0U4;E9PLD0;Q6FIG4;Q9H1C9;Q92928;A0A024R7I3;P61006;P61006-2;B3KTE3;H0YMN7;Q59EP4;B4DMS1;H0YLJ8;H0YL94;A0A024RB27;Q504R6;P51153;H0YNE9;Q92930 RAB10;RAB15;hCG_1996054;RAB1A;RAB1B;RAB1C;RAB8A;RAB8B;hCG_24991;RAB13 Ras-related protein Rab-10;Ras-related protein Rab-15;Ras-related protein Rab-1A;Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C;Ras-related protein Rab-8A;Ras-related protein Rab-13;Ras-related protein Rab-8B no no 0 0 0 3.25 2.77 1 2 1 60.802 60.81 2;3 9.0196E-12 18663 20230619_1880_Aki_TMTPro18x_K_F1 226.59 0 182930 153350 159850 174990 149370 170540 177740 181790 190240 215520 198830 205680 236870 190810 198920 248640 216530 233060 169000 140580 164240 174950 156830 173080 178010 185840 193640 215650 205300 208770 238670 200420 204200 247910 207120 221470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 103020000 16601 3687;3725;4495;452;646;3060 15740 31536;31537;31538;31539 25268;25269;25270;25271 25268 4 9606 Homo sapiens 0.10106871682910423 LLLIQAFRPDR Unmodified 1340.7929 0.79285476 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 7.5 0.5 1 1 60.553 60.59 3 8.5951E-09 17998 20230619_1887_Aki_TMTPro18x_K_F7 170.02 126.42 132670 95106 133410 145650 121920 155450 152860 150190 183090 163430 167240 171180 184720 157450 178600 179190 177670 195580 122590 87515 135400 142990 128570 156210 153270 154170 184130 164750 173150 172960 187680 164050 181680 180650 170130 185530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 352840000 16602 3881 15741 31540;31541 25272;25273 25272 2 9606 Homo sapiens 0.13609005030866683 LLLIWQHK Unmodified 1049.6386 0.63858595 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 6 0 1 60.055 60.117 3 0.00071257 18166 20230619_1886_Aki_TMTPro18x_K_F6 117.18 95.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16603 4061 15742 31542 25274 25274 1 9606 Homo sapiens 0.11575220336180791 LLLLAGVDR Unmodified 968.60187 0.6018661 1224 A0A140VK39;Q9Y570;Q9Y570-4;Q9Y570-2;Q9Y570-3 PPME1 Protein phosphatase methylesterase 1 yes no 0 0 0 2.5 0.5 1 1 62.192 62.212 2 0.0032439 19599 20230619_1881_Aki_TMTPro18x_K_F2 98.904 45.013 158430 123150 144740 160480 134980 191420 170990 165350 204740 148490 143260 139160 153480 134070 167670 166880 149580 180840 146350 113080 148180 159350 142350 190480 171310 170290 204040 150840 150360 141610 157030 140230 169260 167950 143510 171500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158510000 16604 1224 15743 31543;31544 25275 25275 1 9606 Homo sapiens 0.11630923719621933 LLLLESVSGLLQPR Unmodified 1536.9239 0.92392852 2064 A8K548;Q8IZL8;C9JFV4;B4DR36;O15451;I3L1P4;I3L4M7;I3L445 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 0 0 0 5.5 0.5 1 1 66.758 66.8 3 2.8086E-16 21070 20230619_1886_Aki_TMTPro18x_K_F6 195.77 184.24 6315.6 6487.8 5547.7 5753.6 8169.6 7889.4 7374.6 8742.7 10268 6575.3 7832.6 4917.2 4601.1 5065.2 6694.4 7196.4 8442.2 8781.7 5843.3 5931 5739.1 5906.1 8255.1 7842 7570.2 8805.5 10184 6717.2 7991.3 5088.7 4910.3 5332.8 6870.3 7282.6 8062.9 8322.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11043000 16605 2064 15744 31545;31546 25276 25276 1 9606 Homo sapiens 0.1769435088829141 LLLLGAGESGK Unmodified 1056.6179 0.61791009 1253;3415;1073;3738;3385 P04899-4;P04899;Q93020;P11488;A8MTJ3;Q5T697;A1LQ23;P19087;A0A6Q8PGR1;A0A087WZE5;A0A1W2PRE1;Q5JWD1;H0Y7E8;A0A1W2PQK2;A2A2R6;A0A087WTB6;A0A0S2Z3H8;A0A7I2V5R6;Q5JWF2;Q5JWF2-2;P63092-4;P63092-3;P63092;P63092-2;Q5JWE9;A0A0S2Z3S5;Q5FWY2;A0A590UJS2;Q8N2B4;P38405-2;A8K1Y9;P38405;A0A142CHG9;P09471-2;P09471;B3KP89;A0A1W2PRJ7;A0A1W2PS82;P08754;P63096;A0A3B3IUA8 GNAI2;WUGSC:H_LUCA16.1;GNAT1;GNAT3;GNAT2;GNAS;GNAO1;GNAL;GNAI3;GNAI1 Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(olf) subunit alpha;Guanine nucleotide-binding protein G(o) subunit alpha;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-1 no no 0 0 0 2.18 1.95 5 4 1 1 59.791 59.8 2;3 4.3588E-06 18554 20230619_1880_Aki_TMTPro18x_K_F1 185.6 0 624530 526660 565340 647700 512160 614110 615930 595540 659800 747240 733000 783390 765830 686760 590280 762160 360830 865330 577150 483130 578960 643680 539480 623090 616540 613990 673080 747990 750200 790000 771950 715610 591880 769960 350950 818950 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2656400000 16606 3385;1073;1253;3415;3738 15745 31547;31548;31549;31550;31551;31552;31553;31554;31555;31556;31557 25277;25278;25279;25280;25281;25282 25278 6 9606 Homo sapiens 0.09186585165844008 LLLLGTGESGK Unmodified 1086.6285 0.62847478 3525;186 Q59FM5;P29992;O95837;A0A024R240;P50148;G9FP35 GNA11;GNA14;GNAQ Guanine nucleotide-binding protein subunit alpha-11;Guanine nucleotide-binding protein subunit alpha-14;Guanine nucleotide-binding protein G(q) subunit alpha no no 0 0 0 1.5 0.5 1 1 59.868 59.874 3 1.0083E-05 18559 20230619_1881_Aki_TMTPro18x_K_F2 143.5 86.155 160380 126740 153190 159570 137560 161080 162640 163680 179190 198020 197880 200760 226890 192800 194900 238230 220370 249710 148210 116320 156030 158490 144890 162820 163120 167970 182490 198340 203420 203470 229140 201580 200400 239170 210800 236950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 242490000 16607 3525;186 15746 31558;31559 25283;25284 25284 2 9606 Homo sapiens 0.08862567820278855 LLLLVQGK Unmodified 882.59024 0.59023878 3063 H3BM67;H3BUP2;H3BUN4;Q5TZN6;O60936;O60936-3;O60936-1 NOL3 Nucleolar protein 3 yes no 0 0 0 5 0 1 62.792 62.838 3 0.088101 19206 20230619_1885_Aki_TMTPro18x_K_F5 51.787 29.047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16608 3063 15747 31560 25285 25285 1 9606 Homo sapiens 0.14424726696279322 LLLNNDNLLR Unmodified 1196.6877 0.68772099 3638;1928 P52907;A8K0T9;Q53GE2;Q53GC7;A4D0V4;P47755;C9JUG7;F8W9N7;P47755-2 CAPZA1;CAPZA2 F-actin-capping protein subunit alpha-1;F-actin-capping protein subunit alpha-2 no no 0 0 0 3.67 3.09 1 1 1 58.586 58.606 2 1.3141E-09 17898 20230619_1880_Aki_TMTPro18x_K_F1 207.68 159.44 753000 690850 716670 715570 673060 718850 763100 736530 871360 882000 959000 827750 1011600 813250 871620 999800 900790 992560 696530 632560 730330 721190 704950 727550 767760 755200 885140 882010 981110 843010 1023700 849570 891150 1000900 862230 942480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4660200000 16609 3638;1928 15748 31561;31562;31563 25286;25287;25288 25286 3 9606 Homo sapiens 0.0972446383445913 LLLNNGAK Unmodified 841.50215 0.50215205 435 A0A024R7A8;P15121;Q59EL5;E9PCX2;E9PEF9;O15289 AKR1B1 Aldose reductase yes no 0 0 0 3 0 1 48.9 48.978 2 3.6252E-14 13685 20230619_1882_Aki_TMTPro18x_K_F3 195.98 63.04 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16610 435 15749 31564 25289 25289 1 9606 Homo sapiens 0.07506106105665822 LLLPGELAK Unmodified 952.59572 0.59571809 73;721;4226 U3KQK0;A0A024QZZ7;A0A024RCJ9;A0A024RCL8;B2R4S9;B4DR52;I6L9F7;Q5QNW6-2;Q99879;Q99877;Q5QNW6;P62807;P58876;O60814;Q93079;Q99880;P57053;A8K9J7;Q0D2M2;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257;L0R4T3;A0A2R8Y619 HIST1H2BN;HIST1H2BD;HIST1H2BK;HIST1H2BI;HIST1H2BM;HIST2H2BF;HIST1H2BC;HIST1H2BH;HIST1H2BL;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB;ABCF2 Histone H2B;Histone H2B type 2-F;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-H;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B no no 0 0 0 2.21 2.24 10 1 1 1 1 61.314 61.344 2;3 1.7221E-06 20741 20230619_1880_Aki_TMTPro18x_K_F1 133.55 43.998 16658000 14564000 15678000 15712000 12784000 15961000 15667000 15993000 15936000 17745000 18538000 18180000 19820000 16441000 18278000 19961000 19595000 21634000 15402000 13342000 15966000 15786000 13600000 16123000 15648000 16384000 16332000 17848000 18953000 18382000 20110000 17209000 18696000 20091000 18750000 20523000 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 40414000000 16611 73;721;4226 15750 31565;31566;31567;31568;31569;31570;31571;31572;31573;31574;31575;31576;31577;31578 25290;25291;25292;25293;25294;25295;25296;25297;25298;25299;25300;25301;25302;25303 25293 14 9606 Homo sapiens 0.11752405488095974 LLLPHAFSR Unmodified 1052.6131 0.61309948 1087 A0A0S2Z470;Q96FT4;A0A0S2Z456;Q92733;A0A0S2Z483 PRCC Proline-rich protein PRCC yes no 0 0 0 5.5 0.5 1 1 50.452 50.529 3 1.7548E-05 14126 20230619_1886_Aki_TMTPro18x_K_F6 161.79 118.67 27676 30172 31268 34952 37862 39747 39711 46466 40499 29885 27002 30566 31592 24020 33319 35490 35469 27301 25672 27639 31589 34980 38819 39985 39963 46535 40662 31106 28582 30792 32172 25598 33977 35018 33859 26048 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43181000 16612 1087 15751 31579;31580 25304 25304 1 9606 Homo sapiens 0.08889745813735317 LLLPLFR Unmodified 870.56911 0.5691094 514 A0A024R8E4;Q9BV86-2;Q9BV86 C9orf32;NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed yes no 0 0 0 7.5 0.5 1 1 64.062 64.087 2 0.0043852 19571 20230619_1888_Aki_TMTPro18x_K_F8 148.62 62.28 156450 172370 174280 161020 160690 173370 183060 161840 153020 121100 158480 124130 111070 97782 251980 89279 99800 95104 145110 157610 175280 163880 168390 174250 182400 165140 157600 124690 160350 125080 121400 101280 244450 90733 96927 90286 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87739000 16613 514 15752 31581;31582 25305;25306 25306 2 9606 Homo sapiens 0.12864761387425006 LLLPTPTVK Unmodified 980.62702 0.62701821 4208 Q8IX12-2;Q8IX12;A0A0C4DGG8 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 0 0 0 4 0 1 59.296 59.298 3 0.00034009 18034 20230619_1883_Aki_TMTPro18x_K_F4 107.69 73.307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16614 4208 15753 31583 25307 25307 1 9606 Homo sapiens 0.1359297852217196 LLLPWLEAR Unmodified 1109.6597 0.65971533 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 4 0.816 1 1 1 64.678 64.707 2 0.00014365 20278 20230619_1883_Aki_TMTPro18x_K_F4 174.69 161.01 581980 494020 520530 567650 450800 570750 569050 582780 610460 668260 567410 585510 662950 552410 602410 712790 328890 647380 537800 452880 533210 567410 477640 577130 568350 596780 618430 668130 588580 597010 670210 579460 599330 709740 319520 614410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 615450000 16615 826 15754 31584;31585;31586 25308;25309 25309 2 9606 Homo sapiens 0.10927185645027748 LLLQGEADQSLLTFIDK Unmodified 1903.0302 0.030244081 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7.5 0.5 1 1 65.569 65.591 4 4.6365E-05 20202 20230619_1888_Aki_TMTPro18x_K_F8 95.347 82.684 6911.8 5189.8 5975.8 5526.5 5809.5 7272.9 8291.1 5867.8 7065.1 6075.8 7616.1 7330.4 7426.5 8268.1 5889.6 9034.9 6886.5 9302.6 6380.7 4756.6 6146.1 5579.2 6117.9 7189.4 8171.9 6104.3 7281.4 6173.7 7777.6 7424.4 7526.1 8529 6089.8 9072.7 6596.1 8823.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109220000 16616 3758 15755 31587;31588 25310 25310 1 9606 Homo sapiens 0.11485016872256892 LLLQGLMDSVEAK Unmodified 1415.7694 0.76940171 1731 A0A804HJA4;J3KN16;Q5VYK3;B3KXF2 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 1.5 0.5 1 1 65.073 65.077 3 0.026259 20580 20230619_1880_Aki_TMTPro18x_K_F1 41.401 26.71 4707.4 2846 3648.7 4071.7 4678.9 5105.4 3933.1 3212.7 3655 4784.6 5479.1 5408.6 8100.2 4881.3 4903.5 5460.2 5814 6714.5 4337.6 2618.8 3811.7 4021.3 4759.9 5040.4 4001.2 3458.1 3820.1 4770.5 5646.8 5444.6 8016.7 5094.7 5095.5 5545.9 5560.3 6360.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13776000 16617 1731 15756 31589;31590 25311 25311 1 9606 Homo sapiens 0.07814778411398038 LLLQQNK Unmodified 855.5178 0.51780212 868 M0QZS0;A0A804CAZ4;D6W646;A0A2X0SSI0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 ARHGEF18;hCG_22253 Rho guanine nucleotide exchange factor 18 yes no 0 0 0 2.5 0.5 1 1 48.149 48.224 2 0.0011005 13279 20230619_1882_Aki_TMTPro18x_K_F3 184.24 0 120810 96549 102300 122220 173820 182020 174260 150680 200630 149430 163750 200270 185300 156120 164020 184770 202520 217520 111550 88612 106680 122040 174880 178810 176300 156110 201310 152750 170940 199420 187480 164030 169400 186980 193500 206200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 300750000 16618 868 15757 31591;31592 25312 25312 1 9606 Homo sapiens 0.084263926227095 LLLQVQHASK Unmodified 1135.6713 0.67134264 3439;3388;1072 A0A0S2Z3H3;P12235;A8K787;V9GYG0;A0A0S2Z359;P05141;Q6NVC0;P12236;Q6I9V5;Q59EI9 SLC25A4;SLC25A5;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 0 0 6 0 1 47.851 47.931 3 0.010346 13004 20230619_1886_Aki_TMTPro18x_K_F6 68.355 57.143 155190 147440 164020 169930 175830 201450 186270 195320 232470 174240 166140 159190 181780 143320 176130 199390 194930 175290 143720 135110 166110 170220 182080 201170 188620 199340 231450 176880 174240 161870 184740 151360 180350 198050 186190 166820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82224000 16619 1072;3388;3439 15758 31593 25313 25313 1 9606 Homo sapiens 0.10893382668359664 LLLSGTADGADLR Unmodified 1300.6987 0.69867961 3056 H0YM23;O75179-6;O75179-7;O75179-2;O75179;B4DTP3;O75179-3;O75179-4;O75179-5 ANKRD17 Ankyrin repeat domain-containing protein 17 yes no 0 0 0 5 0 1 55.461 55.525 2 0.0023418 16051 20230619_1885_Aki_TMTPro18x_K_F5 113.69 62.778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16620 3056 15759 31594 25314 25314 1 9606 Homo sapiens 0.060358214180723735 LLLSSETPIEGK Unmodified 1285.7129 0.71293269 4555 Q9HDC9;Q9HDC9-2;H0Y512 APMAP Adipocyte plasma membrane-associated protein yes no 0 0 0 6.2 0.748 1 2 2 57.871 57.933 2;3 1.2672E-18 17240 20230619_1886_Aki_TMTPro18x_K_F6 285 233.65 102410 83641 96019 108070 101720 116880 114230 115040 128310 131330 133410 144830 142010 131330 149070 160350 146030 174200 94646 76775 98242 107240 105600 117460 114900 118090 130160 132260 137140 145960 145060 137420 151370 161410 139950 165210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1016299999.9999999 16621 4555 15760 31595;31596;31597;31598;31599 25315;25316;25317 25316 3 9606 Homo sapiens 0.08150473846376372 LLLSTLTLLSK Unmodified 1200.7693 0.76932535 379 G3V4W4;A0A024R649;Q96EK6;G3V5E4 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes no 0 0 0 8 0 1 66.398 66.417 2 6.601700000000001E-25 20506 20230619_1888_Aki_TMTPro18x_K_F8 224.64 104.52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16622 379 15761 31600 25318 25318 1 9606 Homo sapiens 0.17697146473710745 LLLTSTEK Unmodified 903.5277 0.5276981 4150 Q7L0Y3;C9JVB6 TRMT10C Mitochondrial ribonuclease P protein 1 yes no 0 0 0 4.5 3.5 1 1 52.447 52.486 3 0.0047753 14592 20230619_1888_Aki_TMTPro18x_K_F8 91.783 47.968 187010 161370 176020 176710 195500 212370 216500 201740 222870 245500 223740 227180 263130 213560 206360 288210 264740 238910 172900 147860 180040 177740 202050 211870 217250 207990 226960 245190 231230 231060 264590 224680 214510 285430 252560 227540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 140330000 16623 4150 15762 31601;31602 25319;25320 25320 2 9606 Homo sapiens 0.07207535837426349 LLLTTDLK Unmodified 915.56408 0.56408361 4288 Q8WXH0-2;Q8WXH0;D4YW74;G3V5X4;A0A0C4DGK3;Q8WXH0-7;Q7Z362;G3V4T3;G3V3D4 SYNE2;TROPH;DKFZp686J1895 Nesprin-2 yes no 0 0 0 1 0 1 60.133 60.133 2 8.391E-09 18545 20230619_1880_Aki_TMTPro18x_K_F1 159.04 90.618 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16624 4288 15763 31603 25321 25321 1 9606 Homo sapiens 0.10292412734133904 LLMDDLK Unmodified 846.45209 0.45209032 2140 B7Z3Z9;E7EPM6;P33121;P33121-2;A8K9T3;B4E0R0;P33121-3;H0Y9Z9;A0A994J7S4;D6RER0;Q108N2;Q108N1 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes no 0 0 0 5 0 1 58.635 58.691 2 0.057866 17366 20230619_1885_Aki_TMTPro18x_K_F5 82.671 36.106 52616 49345 58928 59891 43072 59730 49207 50258 65791 74933 73511 74257 77633 69095 79294 79708 86940 83723 48746 45244 59108 59617 46269 60178 49819 52671 66443 74392 75256 75224 79207 72003 81023 80158 83087 79490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18345000 16625 2140 15764 31604 25322 25322 1 9606 Homo sapiens 0.0227223538548742 LLMHHIR Oxidation (M) 934.51709 0.51709061 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;O00429-7;H0YI79;A0A994J6A0;A0A994J3G1;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 0 1 0 3 0 1 30.244 30.338 3 0.023116 5732 20230619_1882_Aki_TMTPro18x_K_F3 71.258 47.059 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16626 3212;3213 15765 31605 25323 25323 1894 1 9606 Homo sapiens 0.04721274702012579 LLMLGLDNAGK Oxidation (M) 1159.6271 0.62709457 3552 Q53YD8;P36404;V9GYD0;B4DGG0;P36404-2 hCG_23373;ARL2;ARL2-SNX15 ADP-ribosylation factor-like protein 2 yes no 0 1 0 2 0 1 60.526 60.538 3 0.010637 18831 20230619_1881_Aki_TMTPro18x_K_F2 62.005 42.392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16627 3552 15766 31606 25324 25324 2218 1 9606 Homo sapiens 0.053666104598505626 LLMLHGQK Unmodified 938.53716 0.53715735 3924 Q15269 PWP2 Periodic tryptophan protein 2 homolog yes yes 0 0 0 4 0 1 46.46 46.504 3 0.061339 12435 20230619_1883_Aki_TMTPro18x_K_F4 47.849 34.812 60796 45351 53959 64630 55732 71312 62957 66390 88118 72259 68996 67719 76342 62606 66090 74686 72822 71801 56133 41688 55486 63737 58083 71445 63827 68310 87553 72619 71990 68785 77192 65401 67803 74677 69604 68231 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48078000 16628 3924 15767 31607 25325 25325 1 9606 Homo sapiens 0.0654302564196314 LLMMAGIDDCYTSAR Oxidation (M) 1731.763 0.76301248 3457 P15880;Q6IPX5;Q3KQT6;Q8N5L9;H0YEN5;Q8J014;E9PM36;I3L404;E9PQD7;Q9BSW5;O60249 RPS2;rps2 40S ribosomal protein S2 yes no 0 1 0 6.5 0.5 2 2 59.509 59.561 3 4.225E-09 17056 20230619_1886_Aki_TMTPro18x_K_F6 137.4 125.79 189090 157620 191220 193930 171440 181760 180450 189180 232860 213850 200350 199170 240740 195880 221620 237140 227700 232440 174880 144600 193760 192760 179910 184940 183120 193420 233020 214410 208860 202790 243460 204410 226110 237340 217840 220800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 490230000 16629 3457 15768 31608;31609;31610;31611 25326;25327;25328;25329 25326 2109;2110 4 9606 Homo sapiens -0.07359850873922369 LLMMAGIDDCYTSAR Unmodified 1715.7681 0.76809785 3457 P15880;Q6IPX5;Q3KQT6;Q8N5L9;H0YEN5;Q8J014;E9PM36;I3L404;E9PQD7;Q9BSW5;O60249 RPS2;rps2 40S ribosomal protein S2 yes no 0 0 0 7.5 0.5 1 1 62.551 62.581 3 5.2066E-43 18886 20230619_1888_Aki_TMTPro18x_K_F8 289.38 282.8 184250 150720 165350 181820 153470 189640 183630 180330 196470 224630 174800 189200 228400 182800 186560 269640 211420 242400 170230 138250 169480 181170 161350 190940 183820 186050 198860 223530 182810 193500 229380 193430 192290 267770 202260 230410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1321000000 16630 3457 15768 31612;31613 25330;25331 25331 2 9606 Homo sapiens -0.06115547011313538 LLMSEDYFTQAMEVK Oxidation (M) 1819.8372 0.83722328 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJA1;A0A804HKK7;A0A804HKX6 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 1 0 6 0 1 62.591 62.643 3 1.727E-05 19255 20230619_1886_Aki_TMTPro18x_K_F6 103.13 84.302 99952 73559 98403 105520 82040 80240 97900 103120 86674 116180 122570 111880 123180 86017 116930 115090 102680 126640 92353 67627 99867 103600 86808 83592 97543 104140 90475 116460 124040 112920 125220 91238 118220 115830 98550 120070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97579000 16631 1723 15769 31614 25332 25332 1130 1 9606 Homo sapiens -0.03990184510803374 LLMSEDYFTQAMEVK Unmodified 1803.8423 0.84230866 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJA1;A0A804HKK7;A0A804HKX6 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 7 0.816 1 1 1 64.214 64.246 3 3.1593E-25 19758 20230619_1887_Aki_TMTPro18x_K_F7 225.13 208.38 211820 177380 206180 235720 155980 205030 229840 223590 209100 269000 232320 289650 307720 257750 281660 274460 272340 326360 195850 162860 209390 232830 168140 209980 226900 228450 215480 269890 241050 291730 310360 267920 286320 278480 261030 309230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 761640000 16632 1723 15769 31615;31616;31617 25333 25333 1 9606 Homo sapiens -0.02745880648194543 LLNENSYVPR Unmodified 1203.6248 0.62478638 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TND0;A0A8V8TLK4 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 7 0.816 1 1 1 50.144 50.223 2 7.2824E-07 13648 20230619_1887_Aki_TMTPro18x_K_F7 183.67 145.38 900560 691900 732300 786720 686450 767470 606040 585950 762590 694340 705290 558820 759500 551980 569850 818190 677670 577270 831120 634460 757270 786490 715370 773680 620980 614430 765870 692250 727420 574120 763870 583870 590110 803730 646660 551220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1313400000 16633 1817 15770 31618;31619;31620 25334;25335;25336 25335 3 9606 Homo sapiens 0.031118980464270862 LLNFPTIVER Unmodified 1200.6867 0.68665836 3263 O43681;B4DEE5 ASNA1 ATPase ASNA1 yes no 0 0 0 2.5 0.5 1 1 62.294 62.314 2 8.6908E-06 19651 20230619_1881_Aki_TMTPro18x_K_F2 166.34 136.53 135690 118410 125520 142170 121670 161650 145040 135180 174930 165360 176960 184120 182350 152230 175790 180470 188610 205220 125440 108590 128430 141860 127590 161320 145800 140790 176570 166120 181760 184950 185610 159620 179610 182270 180450 194590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271450000 16634 3263 15771 31621;31622 25337 25337 1 9606 Homo sapiens 0.09434249465539324 LLNHYQAVPNLHK Unmodified 1545.8416 0.84159587 2559 C9JEG3;B4DNZ2;Q8N8F1;Q8IYF4;Q49A43;Q05DH5;Q9UBQ6;C9IYF5;F5GZK1 EXTL2 Exostosin-like 2;Processed exostosin-like 2 yes no 0 0 0 4 0 1 46.559 46.602 4 4.3637E-16 12449 20230619_1883_Aki_TMTPro18x_K_F4 174.42 151.95 79325 63485 84212 98006 93949 145110 117370 110320 163730 88966 95045 114560 93270 104820 138340 110790 129360 129430 73377 58398 85449 96654 97831 142190 118300 114550 161160 92039 100900 114780 97610 108650 139230 112370 123860 122740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117220000 16635 2559 15772 31623 25338 25338 1 9606 Homo sapiens 0.09050873599971965 LLNIDQK Unmodified 842.48617 0.48616764 4789 yes yes 0 0 0 7.17 0.687 1 3 2 51.499 51.576 2;3 0.0069693 14275 20230619_1887_Aki_TMTPro18x_K_F7 128.86 6.7068 + 1172900 949880 1086900 1239500 1192700 1292100 1181800 1109200 1374600 1277500 1476700 1467700 1432600 1143900 1359200 1479400 1510000 1386900 1083800 872030 1113600 1228200 1230500 1298500 1198300 1150900 1393200 1288100 1508300 1470700 1459600 1208400 1392400 1475800 1442400 1318700 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 1124500000 16636 4789 15773 31624;31625;31626;31627;31628;31629 25339;25340;25341 25339 3 9606 Homo sapiens 0.05862399868760804 LLNIRPPPR Unmodified 1074.6662 0.66619769 1669 O75306;A0A7I2V4X8;B7Z792;O75306-2;A0A7I2YQG7;A0A7I2V596;Q53HG2;A0A7I2V4G5;A0A7I2YQD8;A0A7I2V3J6;A0A7I2V2B9;A0A7I2V4W5;A0A7I2V410;A0A7I2V630;A0A7I2V5G4;A0A7I2V5E2;B7Z9L2;A0A7I2V5D5;A0A7I2V517 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 1 7.5 0.5 1 1 44.474 44.525 3 0.00071392 11224 20230619_1888_Aki_TMTPro18x_K_F8 110.38 76.373 145870 154210 189620 157040 167940 181070 162200 169950 191130 139640 166170 168750 163160 124580 145630 145280 170300 154430 135460 141110 188430 158850 175890 181110 164900 173580 191910 143690 171540 168500 165720 131110 149740 146190 162590 146640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 208430000 16637 1669 15774 31630;31631 25342;25343 25343 2 9606 Homo sapiens 0.13185123596394988 LLNIWQER Unmodified 1070.5873 0.58727866 4574 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 0 0 2 0 1 60.726 60.737 2 0.014073 18910 20230619_1881_Aki_TMTPro18x_K_F2 104.44 77.835 164230 141170 149840 155420 152670 193100 170590 166700 195210 184800 187690 174040 196110 160940 190240 195790 190570 205910 151800 129360 153520 156320 159090 191770 171730 172590 197180 185520 193230 176790 199560 168360 193610 196740 182440 195410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40219000 16638 4574 15775 31632 25344 25344 1 9606 Homo sapiens 0.054808515714512396 LLNLEGFPSGSQSR Unmodified 1503.7682 0.76815616 4212 Q8IYB8;B7Z611 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes no 0 0 0 2 0 1 59.492 59.505 2 0.0025207 18436 20230619_1881_Aki_TMTPro18x_K_F2 85.845 37.562 24652 20133 28594 30796 28688 29699 30069 32916 36734 35279 32319 31337 32903 26087 36544 35557 34022 37011 22825 18516 28731 30202 29809 30182 30455 33460 36881 35402 33398 31818 33723 27601 36953 35662 32597 35127 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14093000 16639 4212 15776 31633 25345 25345 1 9606 Homo sapiens 0.036422803668529014 LLNLYPR Unmodified 887.52289 0.52288749 4008 Q53SW3;Q9BPU6 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 5 0 1 55.462 55.527 2 0.032415 16093 20230619_1885_Aki_TMTPro18x_K_F5 94.163 39.638 177900 175250 163980 156380 136930 184710 127980 127420 175290 50438 50298 45851 55901 41119 69251 53629 47434 50140 164600 160240 167270 159980 144550 183360 131050 132150 170530 55262 57739 46694 57507 43264 68895 53549 45614 47651 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55885000 16640 4008 15777 31634 25346 25346 1 9606 Homo sapiens 0.0746269648532234 LLNNAFEELVAFQR Unmodified 1662.873 0.87295558 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 8 0 1 65.42 65.439 3 4.5257E-12 20105 20230619_1888_Aki_TMTPro18x_K_F8 186.51 143.66 9001.6 9543.7 8829.1 10241 7358.3 11632 9041.3 9966 10557 14575 14435 17556 13006 12962 16382 15125 13974 17332 8337.6 8737.1 8973.7 10304 7834.8 11614 9074 10418 10839 14564 14594 17514 13488 13628 16461 15292 13417 16426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5310500 16641 1104 15778 31635 25347 25347 1 9606 Homo sapiens 0.06803401843399115 LLNPSLQK Unmodified 911.54402 0.54401687 2082 A8K5Y7;Q9HAV4;B3KPQ5;B3KNC6 XPO5 Exportin-5 yes no 0 0 0 3 0 1 51.483 51.548 3 0.0024067 14830 20230619_1882_Aki_TMTPro18x_K_F3 104.44 47.259 112570 92453 91627 97303 118750 145460 111610 103110 139200 54593 60017 48980 60664 48560 79265 65017 62866 43388 103930 84697 95278 98497 121230 142440 113710 106980 136830 57819 65308 50083 62784 50957 79283 63920 60173 41511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58253000 16642 2082 15779 31636 25348 25348 1 9606 Homo sapiens 0.08470661794171974 LLNQPNQWPLVK Unmodified 1448.814 0.81398414 173 A0A0S2Z487;A0A024R1X8;P14923;A0A0S2Z495 JUP Junction plakoglobin yes no 0 0 0 4.33 0.471 2 1 61.778 61.804 3 0.001775 19081 20230619_1883_Aki_TMTPro18x_K_F4 88.596 67.643 47776 41205 48490 48189 62648 55917 53192 55631 64250 45661 51481 45143 58185 44891 50179 52619 55985 61663 44198 37777 49389 48211 63607 55991 54526 56575 64281 46704 53667 45895 58769 46767 51500 53248 53549 58451 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141990000 16643 173 15780 31637;31638;31639 25349;25350 25349 2 9606 Homo sapiens 0.10752970339717649 LLNVWQVR Unmodified 1026.5974 0.59744942 3916 Q15061;C9IZK7 WDR43 WD repeat-containing protein 43 yes no 0 0 0 5.5 0.5 1 1 60.444 60.499 2 0.030302 18316 20230619_1886_Aki_TMTPro18x_K_F6 92.677 48.869 178980 167100 160050 160720 190340 249780 195910 193830 260310 54926 40956 39547 49142 40873 86105 54952 53907 44013 165500 152900 164680 164080 195940 244480 199000 198130 252160 62939 52787 41030 51738 42866 84952 54488 51820 41956 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116510000 16644 3916 15781 31640;31641 25351 25351 1 9606 Homo sapiens 0.0852145929670769 LLNYAPLEK Unmodified 1059.5964 0.59644637 3728 P62875 POLR2L DNA-directed RNA polymerases I, II, and III subunit RPABC5 yes yes 0 0 0 5 3 1 1 59.145 59.172 3 0.017383 18253 20230619_1881_Aki_TMTPro18x_K_F2 65.347 52.786 49592 34666 43084 44767 41806 51850 50147 45249 58367 47986 47595 40965 43549 36083 46855 51874 41331 40794 45765 31841 44308 44468 43819 51723 50317 46767 58532 48165 49128 41779 44723 38210 47312 51243 39595 38866 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20967000 16645 3728 15782 31642;31643 25352;25353 25352 2 9606 Homo sapiens 0.0690320013713972 LLPAELPAK Unmodified 950.58007 0.58006802 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4.5 3.5 1 1 57.174 57.2 2 8.6258E-05 16625 20230619_1888_Aki_TMTPro18x_K_F8 157.86 123.78 248990 201300 220720 247110 216730 263990 262790 253480 276010 292510 301700 293020 308340 246390 282950 332380 295810 303610 230000 184690 226720 246010 226910 265370 262730 260760 281550 293490 308580 295960 313150 260280 289160 330880 282960 288640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 279710000 16646 3758 15783 31644;31645 25354;25355 25355 2 9606 Homo sapiens 0.10280118971036245 LLPALASVPALPSDS Unmodified 1449.8079 0.80789571 1264 A0A1B0GU86;V9HWA0;B4DNW0;C9JMV9;Q03154-2;Q03154-4;Q03154;Q03154-3 HEL-S-5;ABHD14A-ACY1;ACY1 Aminoacylase-1 yes no 0 0 0 4.5 3.5 1 1 66.119 66.129 2;3 1.8642E-05 20395 20230619_1888_Aki_TMTPro18x_K_F8 106.26 95.843 18415 16211 14461 18753 14677 18677 18172 19375 20631 22616 20976 19799 24660 20975 20126 22787 24271 25681 17006 14860 15052 18728 15353 18905 18198 19828 20909 22596 21656 20269 24839 21704 20789 23024 23192 24356 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 40100000 16647 1264 15784 31646;31647 25356;25357;25358;25359 25359 4 9606 Homo sapiens 0.1009840731753684 LLPAVTFDGK Unmodified 1059.5964 0.59644637 3968;2412 B3KTC8;B7ZKJ7;Q3KQV9;Q3KQV9-2 UAP1L1 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 no no 0 0 0 1.5 0.5 1 1 61.614 61.619 3 0.00057419 19327 20230619_1881_Aki_TMTPro18x_K_F2 98.048 83.891 31501 23993 29677 30049 26658 29130 31604 31467 31049 40025 48601 48469 47897 41417 46749 49490 48109 53314 29102 22022 30254 29845 28055 29584 31586 32221 32381 40225 49013 48594 48846 43379 47650 49810 46053 50578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46468000 16648 2412;3968 15785 31648;31649 25360 25360 1 9606 Homo sapiens 0.06903200137116983 LLPDDPYEK Unmodified 1088.539 0.53899107 2269 V9HWG9;B2R983;P78417;Q5TA02;P78417-3;P78417-2;Q5TA01 HEL-S-21;GSTO1 Glutathione S-transferase omega-1 yes no 0 0 0 3 0.816 1 1 1 55.116 55.14 2 0.00091558 16302 20230619_1883_Aki_TMTPro18x_K_F4 130.96 66.127 214300 154550 180140 199290 178070 210260 207700 215400 247750 269210 255730 286980 318800 269730 219970 377590 364690 416810 197750 141940 185930 197720 186170 211860 208980 221110 250660 269700 264860 290040 318840 284590 234290 379340 347900 395280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88079000 16649 2269 15786 31650;31651;31652 25361;25362 25362 2 9606 Homo sapiens -0.0017368685912515502 LLPDHLQLK Unmodified 1075.639 0.63897988 612 A0A024RA77;Q9BSE4 FLJ22313;HERPUD2 Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein yes no 0 0 0 1 0 1 53.735 53.735 3 0.0030661 15890 20230619_1880_Aki_TMTPro18x_K_F1 84.615 63.167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16650 612 15787 31653 25363 25363 1 9606 Homo sapiens 0.1041859526535518 LLPDTILEK Unmodified 1040.6118 0.61176208 66 H7C2B1;A0A024QZW2;Q9UMY1-2;Q9UMY1 NOL7 Nucleolar protein 7 yes no 0 0 0 6 0 1 61.806 61.86 3 0.017913 18955 20230619_1886_Aki_TMTPro18x_K_F6 57.598 20.123 59698 52300 56380 66443 50243 59634 62813 61327 69259 71438 66007 74911 77812 68011 74704 79011 78851 85555 55200 47987 57524 65840 53051 60851 62811 62833 70102 71756 68471 75625 78912 70969 76272 79577 75451 81166 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19090000 16651 66 15788 31654 25364 25364 1 9606 Homo sapiens 0.09308066934318049 LLPEEYHR Unmodified 1055.54 0.53999412 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9;B3KY97;B3KPQ2 RRP12 RRP12-like protein yes no 0 0 0 3.5 0.5 1 1 41.543 41.595 3 0.00040353 10233 20230619_1883_Aki_TMTPro18x_K_F4 142.79 97.767 46660 43978 41143 37534 46425 51183 48899 63101 56283 46657 70601 57218 70708 48761 45579 50739 58897 52724 43144 40204 42313 38685 47891 51019 49437 63132 57418 48342 71633 57395 70879 50729 47550 51061 56181 50079 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129030000 16652 2355 15789 31655;31656 25365 25365 1 9606 Homo sapiens 0.01444572300465552 LLPEQLIK Unmodified 952.59572 0.59571809 4301 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 0 1 0 1 60.817 60.817 2 0.0015162 18719 20230619_1880_Aki_TMTPro18x_K_F1 141.39 63.466 87628 65381 79085 84587 76819 88368 78614 80061 92442 100570 94183 90565 113270 95281 88676 114730 98900 111450 80917 60037 81040 83885 80090 88874 79626 82914 93553 100250 97340 92588 113820 99176 91317 114720 94615 105840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140020000000 16653 4301 15790 31657 25366 25366 1 9606 Homo sapiens 0.11752405488084605 LLPGIEVLWTGPK Unmodified 1421.8282 0.82823722 3279 O60502-4;O60502;O60502-2;O60502-3 MGEA5 Protein O-GlcNAcase yes no 0 0 0 4 0 1 65.268 65.278 3 0.022161 20528 20230619_1883_Aki_TMTPro18x_K_F4 56.951 40.32 10131 9677.5 9535.6 10307 7445.4 10977 11254 9883.3 10282 11469 10854 12161 12181 9704.8 11003 13197 9459.8 13167 9373.3 8861.9 9714.3 10370 8019.2 11021 11096 10221 10558 11524 11178 12229 12327 10279 11138 13197 9091.7 12493 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4710400 16654 3279 15791 31658 25367 25367 1 9606 Homo sapiens 0.1341962276801496 LLPGLEADSKPGR Unmodified 1351.746 0.74596415 4200 Q86Y56;Q86Y56-2 DNAAF5 Dynein assembly factor 5, axonemal yes no 0 0 1 8 0 2 50.554 50.63 3 3.6966E-08 13771 20230619_1888_Aki_TMTPro18x_K_F8 146.79 106.29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16655 4200 15792 31659;31660 25368;25369 25368 2 9606 Homo sapiens 0.08416100689055384 LLPIDGANDLFFQPPPLTPTSK Unmodified 2380.2678 0.26784859 3279 O60502-4;O60502;B3KMK2 MGEA5 Protein O-GlcNAcase yes no 0 0 0 2 0 1 65.696 65.703 3 2.9637E-08 21086 20230619_1881_Aki_TMTPro18x_K_F2 104.63 90.47 6882.8 5255.5 4780.9 6767 6605.4 6057.1 6701.7 6069.1 5017.5 7590.7 4611.4 6856.1 6022.6 6499.7 6992.1 8127.2 6983 7370.6 6345.6 4825.2 5069.5 6697.3 6709.7 6182.9 6697.4 6243.6 5211.1 7561.9 4833.5 6972.2 6158.7 6795.8 7098.9 8095.8 6684.1 7007.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14319000 16656 3279 15793 31661 25370 25370 1 9606 Homo sapiens 0.13292538014775346 LLPLEEHYR Unmodified 1168.6241 0.6240581 2224 Q9H4M9;B2R5U3;A0A024R571;B4DZH9;C9JC03;C9JIJ3;Q9NZN3;C9IZH1;B4DLA1;A0A024R0S6;Q8NCJ3;Q9NZN3-2;Q9NZN4 EHD1;EHD3;EHD2 EH domain-containing protein 1;EH domain-containing protein 3;EH domain-containing protein 2 yes no 0 0 0 5.5 0.5 1 1 47.722 47.8 3 1.2296E-08 12790 20230619_1885_Aki_TMTPro18x_K_F5 172.94 141 73773 63134 71415 81196 81235 95134 91224 83689 102890 94711 95392 99810 115800 98688 80633 113400 123410 118880 68218 57939 72966 80672 83922 94860 91728 86604 103870 95329 99111 101070 115910 102630 85147 113930 117630 112870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 228260000 16657 2224 15794 31662;31663 25371 25371 1 9606 Homo sapiens 0.046491033973552476 LLPLNDCR Unmodified 999.51715 0.51715019 4013 Q549N0;Q9Y281;Q9Y281-3 CFL2 Cofilin-2 yes no 0 0 0 7.5 0.5 1 1 50.139 50.218 2 0.0010683 13650 20230619_1887_Aki_TMTPro18x_K_F7 121.62 78.592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16658 4013 15795 31664;31665 25372;25373 25372 2 9606 Homo sapiens 0.017372299113503686 LLPLSVTPEAFSGTVIEK Unmodified 1900.0557 0.05573055 3329 Q6NX55;O94763-3;O94763;Q96C15;O94763-2 C19orf2;URI1 Unconventional prefoldin RPB5 interactor 1 yes no 0 0 0 2 0.816 1 1 1 64.342 64.355 3 1.0746E-06 20588 20230619_1881_Aki_TMTPro18x_K_F2 110.12 100.46 9444.3 7177.9 7534.9 9324.4 8761.2 9595.5 9101.8 8216.4 10055 11317 10560 12195 12519 10952 14096 13094 10189 13826 8714.4 6590.9 7841.9 9239.5 9017.2 9651.6 9185.2 8577.2 10221 11298 10915 12293 12787 11451 14087 13168 9811.9 13111 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102630000 16659 3329 15796 31666;31667;31668 25374 25374 1 9606 Homo sapiens 0.14170491394656892 LLPLTQYPDSSVR Unmodified 1487.7984 0.79839365 4435 Q9BTY7;Q96BK8 HGH1;C8orf30A Protein HGH1 homolog yes no 0 0 0 1 0 1 58.268 58.268 3 0.00081535 17825 20230619_1880_Aki_TMTPro18x_K_F1 87.831 78.59 34038 32753 37541 37407 31595 38270 40226 36559 40662 40809 40113 42403 47165 37428 50447 37360 44627 39918 31535 30011 37760 37419 33527 38596 40077 37599 41391 41064 41529 42780 48041 38786 50842 37738 42722 37905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57292000 16660 4435 15797 31669 25375 25375 1 9606 Homo sapiens 0.0740063903203918 LLPLVSDEVFIR Unmodified 1399.8075 0.80750177 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 8 0 1 64.435 64.456 2 5.8153E-24 19735 20230619_1888_Aki_TMTPro18x_K_F8 259.4 199.04 67992 54725 57912 76367 66955 76483 73624 76790 79209 93556 106190 112550 103530 105020 114580 115780 128230 149390 62787 50278 59922 75302 69052 77316 74043 78886 81495 94205 107650 113150 106390 109120 117080 118040 122700 141460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 229410000 16661 3432 15798 31670 25376 25376 1 9606 Homo sapiens 0.12359032388349078 LLPPAQDGFEVLGAAELEAVR Unmodified 2194.1634 0.16338352 2715 B7ZMD6;Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes no 0 0 0 5 0 1 65.049 65.093 3 5.4413E-08 20198 20230619_1885_Aki_TMTPro18x_K_F5 105.06 93.373 5830.7 5768.5 6255.2 6458.3 7610.7 7456.2 8990.4 8990.3 9258.3 8395.5 9743.1 8924.4 8527.7 8865.3 9796.6 8641.2 8166.4 13415 5401.8 5284.1 6341.6 6482.9 7823.8 7502.5 8991.3 9059.9 9430.2 8532.9 9918.7 9037.6 8810.4 9136.6 9845.4 8956.7 7865.6 12672 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19647000 16662 2715 15799 31671 25377 25377 1 9606 Homo sapiens 0.11406836258174735 LLPQLTYLDGYDRDDK Unmodified 1923.9578 0.95780742 1493 A0A384P5U2;P39687;H0YN26;Q6PKH8;Q08AJ6 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes no 0 0 1 7 0 1 61.775 61.814 3 0.00057098 18597 20230619_1887_Aki_TMTPro18x_K_F7 81.428 72.381 131020 93022 136140 116760 53759 151430 115690 129160 145240 157420 176210 257270 259240 265860 119290 350920 327210 520370 121090 85409 136630 116460 64784 149720 114130 134240 147570 160670 183320 257030 255860 278490 136590 359870 312400 491750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 516530000 16663 1493 15800 31672 25378 25378 1 9606 Homo sapiens 0.03278682798668342 LLPSLIGR Unmodified 867.55419 0.55418762 3325 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 0 5 0.816 1 1 1 59.187 59.228 2 0.0024133 17554 20230619_1885_Aki_TMTPro18x_K_F5 127.12 59.774 269370 252200 255970 281020 251210 303410 293830 300930 295190 261410 224380 199590 259150 209470 241370 284360 269090 248760 249200 231050 261260 281800 262630 305050 293860 306510 297870 264480 234970 205990 262550 219790 247510 282430 257050 236720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 450980000 16664 3325 15801 31673;31674;31675 25379;25380 25379 2 9606 Homo sapiens 0.11511269519428424 LLPVLDR Unmodified 824.51199 0.51198846 3992 Q53FA7;B4DMQ7 TP53I3 Quinone oxidoreductase PIG3 yes no 0 0 0 8 0 1 56.46 56.517 2 0.069598 16388 20230619_1888_Aki_TMTPro18x_K_F8 77.374 28.614 102410 78289 89914 89884 85622 126330 86058 104020 120030 106970 118040 161230 119150 107050 127950 130390 125620 151740 94562 71797 92336 90307 89644 124390 87872 107830 120240 109600 121570 159230 122030 113400 129850 131840 120390 143800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 302080000 16665 3992 15802 31676 25381 25381 1 9606 Homo sapiens 0.09271294111033512 LLPVLLSTAQEADPEVR Unmodified 1850.0149 0.014928368 2382 Q8TEX9-2;Q8TEX9;B3KQ33;Q59FI4;B3KPS9;B3KT38;B3KTB3;D3DS63;Q59H62;B3KSQ4;Q6I9Y8;B3KPY9;B4DXR7;H0YMR4;H0YN07 IPO4 Importin-4 yes no 0 0 0 6 0 1 64.591 64.635 3 9.125099999999999E-21 20183 20230619_1886_Aki_TMTPro18x_K_F6 194.23 181.25 24919 16444 17862 27426 17977 26604 30941 21462 24942 23929 28231 32950 32711 25443 32791 26222 24115 29790 22960 15154 18810 26746 19059 26814 30227 22394 25866 24329 29054 32765 33214 26542 32829 26564 23196 28236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 561840000 16666 2382 15803 31677 25382 25382 1 9606 Homo sapiens 0.12392150075038444 LLQAETASNSAR Unmodified 1259.647 0.64697839 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;H0YFY6;Q96HN5;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 5.5 0.5 1 1 42.149 42.237 2 0.00034323 10407 20230619_1885_Aki_TMTPro18x_K_F5 111.52 83.7 103260 74852 86764 92672 99959 103230 93040 104310 119100 113870 126680 130100 128500 120680 105950 143710 146620 134310 95284 68710 89722 92274 102630 103630 95066 106710 120160 115070 129680 131060 130140 125930 110590 143420 139810 127720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 569010000 16667 349;3906 15804 31678;31679 25383 25383 1 9606 Homo sapiens 0.027540777241711112 LLQAFLER Unmodified 988.57057 0.57056597 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DS32 CSE1L Exportin-2 yes no 0 0 0 2.5 1.12 1 1 1 1 63.04 63.051 2 0.0018381 19699 20230619_1882_Aki_TMTPro18x_K_F3 136.27 72.061 2619400 2149200 2314600 2520700 2175700 2276100 2626200 2507500 2801800 2632900 2205700 1843500 2376100 1806800 2275300 2612300 2330700 1939500 2419800 1970900 2375600 2512700 2282600 2326400 2627000 2549500 2821500 2630300 2296600 1907800 2413800 1908400 2320300 2573700 2226800 1850700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1816799999.9999998 16668 1462 15805 31680;31681;31682;31683 25384;25385 25385 2 9606 Homo sapiens 0.07582350685515848 LLQAMEPVHVAR Unmodified 1362.7442 0.74419001 2051 A8K4T6;Q16401-2;Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes no 0 0 0 5.33 3.09 1 1 1 50.687 50.739 3 4.763E-13 14659 20230619_1880_Aki_TMTPro18x_K_F1 194.39 137.96 75760 60509 65223 75528 72850 77586 79995 76801 91883 75470 81345 74477 84236 75272 83182 86227 79862 86007 69962 55527 67309 75061 75272 78290 80593 78499 92463 76358 84050 75735 85852 78187 84440 86460 76486 81669 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 606980000 16669 2051 15806 31684;31685;31686 25386;25387 25386 2 9606 Homo sapiens 0.07732768399478118 LLQAQGVEVPSK Unmodified 1267.7136 0.71360139 817 Q8N5A0;A0A087WUT6;O60841 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 0 5.33 3.09 1 1 1 54.043 54.089 3 0.00057596 15295 20230619_1888_Aki_TMTPro18x_K_F8 93.011 64.612 159230 142560 156000 154560 159450 184550 167000 155880 179280 195840 184820 182150 204770 160110 183290 233350 193160 206550 147300 130600 158790 155550 165620 183730 168360 162310 182330 195360 190230 184860 207250 169800 187590 231660 184810 196420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 334510000 16670 817 15807 31687;31688;31689 25388;25389 25389 2 9606 Homo sapiens 0.09045313286105738 LLQCDPSSAGQF Unmodified 1321.5973 0.597251 2294 P61601;B2RB70 NCALD Neurocalcin-delta yes no 0 0 0 4.5 0.5 1 1 60.788 60.815 2 0.00039313 18238 20230619_1885_Aki_TMTPro18x_K_F5 109.66 83.249 80542 64010 78576 80554 85820 98282 92845 94068 117610 92572 89220 101340 101700 84856 93755 108970 100020 106880 74446 58746 80114 80228 88824 97923 93952 96336 117240 93951 93509 101910 103030 89348 95909 108950 95689 101510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 161070000 16671 2294 15808 31690;31691 25390;25391 25391 2 9606 Homo sapiens -0.05068373276139937 LLQCDPSSASQF Unmodified 1351.6078 0.60781569 3561 Q6FGY1;P37235;P84074;O75544 HPCAL1;HPCA Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin yes no 0 0 0 4.5 0.5 1 1 60.517 60.544 2 0.00026354 18111 20230619_1885_Aki_TMTPro18x_K_F5 114.5 95.716 56580 51391 60789 58763 48588 60707 64559 62334 77004 73093 67845 63088 83738 66973 68565 82051 78292 87905 52386 47098 61219 58794 51918 61274 64558 63856 77392 73013 70696 64668 84221 69802 70601 82493 74882 83395 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 95003000 16672 3561 15809 31692;31693 25392 25392 1 9606 Homo sapiens -0.0539239062170509 LLQCLHAK Unmodified 981.54297 0.54297101 4301 Q92621;B4DE72 NUP205 Nuclear pore complex protein Nup205 yes no 0 0 0 3 0 1 47.272 47.352 3 0.027735 12961 20230619_1882_Aki_TMTPro18x_K_F3 64.207 38.268 69634 74098 70148 83686 86015 89569 88696 88217 100570 78116 69348 73616 71941 57172 67965 82723 85645 79974 64514 67866 71538 83808 88120 90127 89610 89952 100510 79378 72773 74386 73166 60889 70236 82515 81734 76010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363440000 16673 4301 15810 31694 25393 25393 1 9606 Homo sapiens 0.05146124153623077 LLQCYPPPEDAAVK Unmodified 1599.7967 0.79667909 3360 O95782-2;O95782;B4DXJ6 AP2A1 AP-2 complex subunit alpha-1 yes no 0 0 0 6 0 1 55.609 55.686 3 0.00019751 16262 20230619_1886_Aki_TMTPro18x_K_F6 76.588 54.055 34423 27688 33543 34976 32746 37139 37886 34390 44430 40483 35762 34602 36938 36680 40243 45243 41734 42489 31820 25411 34147 34751 34230 37327 38094 35495 44551 40430 37158 35478 37864 38200 40974 45160 39922 40383 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29428000 16674 3360 15811 31695 25394 25394 1 9606 Homo sapiens 0.020772619517401836 LLQDFFNGK Unmodified 1080.5604 0.56039521 3430;1463 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;P11142-2;Q53HF2;B4E1Q1;A8K7Q2;E9PN89;P54652;A0A024R6B5;A0A384MDT7;B3KUS2;Q53FC7;B3KSM6;B2R6X5;A0A384NKX5;P17066;B4DHP5 HSPA8;HEL-S-72p;HSPA2;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 6 no no 0 0 0 3.25 2.28 1 1 1 1 63.557 63.575 2 9.6176E-06 20191 20230619_1881_Aki_TMTPro18x_K_F2 191.85 138.29 8957600 7754800 7879800 8974500 6706600 9342900 8528400 8570700 9623000 11321000 10206000 9428000 10797000 9788300 8396300 13531000 9000100 11077000 8277600 7108900 8085500 8968200 7126900 9399200 8530000 8882300 9774400 11236000 10462000 9676500 10890000 10278000 8643600 13384000 8619800 10540000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3991699999.9999995 16675 3430;1463 15812 31696;31697;31698;31699 25395;25396;25397 25395 3 9606 Homo sapiens 0.023337429602634074 LLQDFFNGR Unmodified 1108.5665 0.56654322 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNX1;B4E1T6 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 2.5 0.5 1 1 63.018 63.027 2 9.0314E-05 19978 20230619_1881_Aki_TMTPro18x_K_F2 157.2 123.65 147870 125570 146290 178310 188130 227250 202970 203970 230230 200670 192540 167160 206040 163370 199680 212590 194420 205890 136750 115370 149620 176260 192660 225430 204550 209840 231490 202060 199770 171240 209480 171340 202940 212420 186150 195590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107380000 16676 1031 15813 31700;31701 25398;25399 25398 2 9606 Homo sapiens 0.01660261191796053 LLQDFNR Unmodified 904.47667 0.47666558 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7 0.816 1 1 1 50.866 50.943 2 0.018192 13980 20230619_1887_Aki_TMTPro18x_K_F7 107.59 54.957 444390 388730 393360 427790 440150 515620 490170 489380 577110 383460 399190 353230 395410 307570 445590 426450 419510 351630 410700 356170 404820 430080 455280 514120 493840 498880 575290 392650 417640 358830 405940 325100 450650 422550 401170 335020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 771020000 16677 3758 15814 31702;31703;31704 25400;25401 25401 2 9606 Homo sapiens 0.02060631583231043 LLQDMDINRLR Unmodified 1385.7449 0.74491829 1543 P50851;P50851-2;A0A494BZW2;A0A494C1L5;E9PEM5;A0A494C0R9;Q59HC1;H0Y9N9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes no 0 0 1 7 0.816 1 1 1 63.888 63.921 2 0.022818 19516 20230619_1888_Aki_TMTPro18x_K_F8 82.426 41.397 819130 726100 760620 830350 649210 829380 820250 818240 907920 974890 921640 891160 1053300 858380 867990 1233000 987750 1053100 757370 665490 776420 830170 688800 838430 820080 840940 921080 974260 950410 908070 1061800 906340 894580 1221800 944370 1001900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2475600000 16678 1543 15815 31705;31706;31707 25402;25403 25403 2 9606 Homo sapiens 0.06747563048520533 LLQDSVDFSLADAINTEFK Unmodified 2125.0579 0.057915395 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;A0A1B0GVG8 VIM;HEL113 Vimentin yes no 0 0 0 6 1 1 1 65.891 65.925 3 4.6576E-31 20526 20230619_1885_Aki_TMTPro18x_K_F5 221.47 179.6 42445 27060 28396 25400 49422 54797 45758 38037 40901 45825 54844 56159 59323 47647 44149 50664 44298 54474 39086 24793 30319 26185 49591 52808 46173 40217 42527 46215 55806 56246 59643 49600 45209 51065 42453 51662 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138170000 16679 3414 15816 31708;31709 25404;25405 25404 2 9606 Homo sapiens 0.040388753418937995 LLQEDSSPLLR Unmodified 1269.6929 0.69286595 2396 B3KRK2;Q53HI2;Q9UJV9;H0Y8L8;A0A499FJW5 DDX41 Probable ATP-dependent RNA helicase DDX41 yes no 0 0 0 5 0 1 55.456 55.52 2 0.0018728 16049 20230619_1885_Aki_TMTPro18x_K_F5 102.53 76.794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16680 2396 15817 31710 25406 25406 1 9606 Homo sapiens 0.06880722906407755 LLQEENEELR Unmodified 1271.6357 0.635745 749 A0A024RD56;Q5JTD0-2;Q5JTD0;A0A075B6G8;E2QRK7 TJAP1 Tight junction-associated protein 1 yes no 0 0 0 1 0 1 48.041 48.041 2 0.00026124 13552 20230619_1880_Aki_TMTPro18x_K_F1 117.52 76.526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16681 749 15818 31711 25407 25407 1 9606 Homo sapiens 0.010792556300202705 LLQEIVDQCMNR Unmodified 1517.733 0.73303298 191 A0A024R277;A0A8I5QKQ8;A0A8I5KUM4;Q6NUL7;O15269 SPTLC1 Serine palmitoyltransferase 1 yes no 0 0 0 7 0 1 63.13 63.162 3 0.026434 19257 20230619_1887_Aki_TMTPro18x_K_F7 58.313 49.8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16682 191 15819 31712 25408 25408 1 9606 Homo sapiens -0.005124217569800749 LLQFQDLTGIESMDQCR Unmodified 2052.9609 0.96086066 4333 Q96CS3;B4E2M8 FAF2 FAS-associated factor 2 yes no 0 0 0 6 0 1 63.725 63.771 3 7.3211E-19 19835 20230619_1886_Aki_TMTPro18x_K_F6 188.44 178.19 21751 18620 21042 21293 16112 22246 24760 26395 24335 23275 20852 25547 27585 24314 27358 25254 26182 31383 20113 17068 21371 21310 17387 22508 24457 26589 24682 23753 21897 25776 27934 25178 27747 25714 25098 29723 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230360000 16683 4333 15820 31713 25409 25409 1 9606 Homo sapiens -0.023501334104366833 LLQHGINADDK Unmodified 1222.6306 0.63060004 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 5.5 0.5 1 1 43.624 43.71 3 2.3452E-12 11069 20230619_1885_Aki_TMTPro18x_K_F5 184.03 125.36 308940 229300 268610 306120 293030 359760 287660 303700 368580 403800 476190 485690 492160 411110 328240 527710 575290 562760 285200 210630 276830 303410 302840 358310 293020 316800 375300 405210 483980 486960 494160 432730 351390 529740 547960 534180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 468050000 16684 4386 15821 31714;31715 25410;25411 25410 2 9606 Homo sapiens 0.02818996558062281 LLQHGINADDKR Unmodified 1378.7317 0.73171107 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 1 7.5 0.5 1 1 39.099 39.125 4 0.00021396 9138 20230619_1888_Aki_TMTPro18x_K_F8 103.83 71.826 62154 61388 78561 75259 80155 60908 82002 64024 60517 63250 78675 51014 58752 44007 100260 53299 61717 53103 57672 56282 78411 74704 82844 62845 81925 65256 63579 63571 78907 52199 62471 46160 98832 53555 59363 50471 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 119400000 16685 4386 15822 31716;31717 25412;25413 25413 2 9606 Homo sapiens 0.05749448260758072 LLQIIER Unmodified 883.5491 0.54910224 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4.5 3.5 1 1 58.714 58.735 2 0.015435 17939 20230619_1880_Aki_TMTPro18x_K_F1 111.29 22.383 190380 153200 172630 197760 172910 224030 212140 205850 269060 233700 231970 231170 250580 213810 228100 272350 243350 258480 175880 140630 177060 196350 181020 224020 213320 212310 269320 234740 240550 234280 254120 224210 233440 271840 232790 245590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2544200000 16686 3758 15823 31718;31719 25414;25415 25414 2 9606 Homo sapiens 0.10266965656796856 LLQLLGR Unmodified 811.52797 0.52797287 1952 A4UCR9;C9JJ19;P82930 MRPS34 28S ribosomal protein S34, mitochondrial yes no 0 0 0 6 0 1 61.718 61.772 2 0.038635 18884 20230619_1886_Aki_TMTPro18x_K_F6 81.864 25.323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16687 1952 15824 31720 25416 25416 1 9606 Homo sapiens 0.11467000347943213 LLQLTEK Unmodified 843.50657 0.50656873 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 5.33 3.09 1 1 1 55.437 55.478 2 0.0011862 15899 20230619_1888_Aki_TMTPro18x_K_F8 178.08 47.046 465460 365730 392730 422230 470730 543170 546770 524730 651740 596670 617020 639250 665720 559310 557560 722320 514980 677550 429730 335380 406470 423430 485290 539640 549900 539170 656530 600600 636890 644450 672600 588130 567520 720250 494270 643420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 511310000 16688 2337;3778;3779 15825 31721;31722;31723 25417;25418 25418 2 9606 Homo sapiens 0.07855570528568023 LLQLVEDR Unmodified 984.5604 0.56039521 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 4.25 0.829 1 1 2 59.893 59.926 2 0.00060318 17787 20230619_1885_Aki_TMTPro18x_K_F5 160.26 87.646 753440 626140 654860 744170 619280 799860 747190 739620 811270 865890 728510 687610 880870 685720 642320 967630 740170 767690 696000 574230 673590 742550 650660 803020 747990 763090 820310 862930 757530 706470 882500 722480 664590 955680 707440 731180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 847430000 16689 3137 15826 31724;31725;31726;31727 25419;25420 25420 2 9606 Homo sapiens 0.06749742960278127 LLQMQPAQHGEIIK Unmodified 1604.8708 0.87084709 1129;1341 O00203;O00203-3;A0A0S2Z5J4;A8K586;A0A8Q3WKJ9;A0A8Q3WL34;A0A8Q3SIS1;A0A8Q3SHS3;A0A8Q3WKK0;A0A8Q3SHW6;A0A8Q3SHR2;A0A8Q3SI03;A0A8Q3WKN2;A0A8Q3SIM7;A0A8Q3WKF8;A0A8Q3SHU2;A0A0S2Z4Z4;A0A8Q3WKI5;Q3MNE1;A0A8Q3SHP3;B4E0B2;A0A590UJ60;A0A5F9UJV3;A0A2R8Y2A8;A0A590UKC4;Q68CN5;Q13367;Q13367-4;A0A590UJW5;A0A590UJU7;A0A590UJU0;A0A590UK04;Q13367-3;A0A590UKD3;B3KUS4;A0A590UJE5;A0A590UK30 AP3B1;DKFZp686D17136;AP3B2 AP-3 complex subunit beta-1;AP-3 complex subunit beta;AP-3 complex subunit beta-2 no no 0 0 0 4.5 3.5 1 1 51.061 51.099 3 5.464E-17 14804 20230619_1880_Aki_TMTPro18x_K_F1 214.18 159.28 172360 146760 170100 169230 139890 160650 178150 161610 196530 221130 198010 201230 230280 196300 191180 241760 231570 249700 159400 134540 172530 169020 148770 163170 178000 166690 199420 219670 204500 205010 232180 205100 197610 242500 221300 237020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 183470000 16690 1129;1341 15827 31728;31729 25421;25422;25423 25421 3 9606 Homo sapiens 0.09260649833936441 LLQPPAPIMPLDTNWPLLTVSK Oxidation (M) 2459.3498 0.34980408 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 1 0 5 0 1 65.792 65.836 3 1.4758E-05 20506 20230619_1885_Aki_TMTPro18x_K_F5 90.316 74.724 10351 7937.7 7611.6 9226.7 10465 12060 10407 12870 11424 12004 11683 10652 13278 11310 10584 13443 11022 12963 9546.2 7280.3 8013.7 9250.2 10655 11997 10532 13056 11599 12134 12035 10907 13372 11759 10851 13439 10555 12310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17432000 16691 3647 15828 31730 25424 25424 2338 1 9606 Homo sapiens 0.17850317102283952 LLQPPAPIMPLDTNWPLLTVSK Unmodified 2443.3549 0.35488946 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 5.5 0.5 1 1 66.748 66.791 3 4.3944E-06 20859 20230619_1885_Aki_TMTPro18x_K_F5 95.5 82.651 18838 14878 15284 22304 16495 18128 19801 22387 19983 21489 20955 21513 25112 20410 17792 26488 25211 26734 17388 13682 15883 21846 17130 18738 19785 22552 20400 21755 21634 21812 25150 21417 18679 26506 24060 25384 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33024000 16692 3647 15828 31731;31732 25425 25425 1 9606 Homo sapiens 0.19094620964870046 LLQQEEEIK Unmodified 1128.6027 0.60265396 3650 P54136;E5RJM9;E5RH09 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 51.182 51.24 2;3 1.0121E-05 15020 20230619_1881_Aki_TMTPro18x_K_F2 166.07 48.368 147710 128630 145630 162280 164350 174050 184060 171340 211090 192990 199370 201990 221650 177800 184710 239600 209130 213110 136630 118020 148500 161260 169720 175070 185230 175850 213040 194200 206070 203910 223700 187470 190130 238140 199880 202680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181470000 16693 3650 15829 31733;31734 25426;25427 25426 2 9606 Homo sapiens 0.043496735779854134 LLQQGTAPAQAK Unmodified 1224.6826 0.68263561 459 A0A024R7K7;A0A024R7M6;Q86YP4-2;Q86YP4;Q86YP4-3;B4DKZ7;B4E0Q6 GATAD2A Transcriptional repressor p66-alpha yes no 0 0 0 1.5 0.5 1 1 45.488 45.529 3 0.0010198 12358 20230619_1881_Aki_TMTPro18x_K_F2 88.187 71.161 112330 89143 118880 112850 136730 133950 140910 113150 154380 131150 141270 138600 145170 112460 144110 100690 131580 138680 103900 81818 120440 112300 140560 133430 142180 117600 155940 131880 145740 139380 147880 116370 145620 103650 126070 131290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 103380000 16694 459 15830 31735;31736 25428 25428 1 9606 Homo sapiens 0.07928159971856985 LLQSIGQAPESISEK Unmodified 1598.8516 0.85155143 3858 Q13564-3;Q13564-2;Q13564;Q13564-4 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes no 0 0 0 6.5 0.5 1 1 59.28 59.336 3 2.5807E-05 17835 20230619_1886_Aki_TMTPro18x_K_F6 100.41 72.113 218890 171360 191570 206120 195500 231440 202270 233030 250950 309880 234920 211550 273760 234860 253200 329580 282110 311230 202140 157210 197020 205670 203210 232130 205170 239800 252750 306000 243340 220130 277260 246600 259870 328380 269850 295700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1649599999.9999998 16695 3858 15831 31737;31738 25429;25430 25429 2 9606 Homo sapiens 0.0760797202408412 LLQSMMGNWR Oxidation (M) 1250.59 0.58999756 3186 L8EC67 DGKK yes yes 0 1 0 5 1.41 1 1 1 1 1 31.396 31.468 3 0.051594 6109 20230619_1883_Aki_TMTPro18x_K_F4 42.395 18.544 912810 813970 998430 812140 1013000 1157500 1100200 1068400 1095700 1170100 1145800 1172700 1229300 891570 1204500 893040 1297000 1051200 845180 745130 1006300 825780 1053200 1142500 1104400 1100000 1119300 1176800 1177300 1179900 1249700 930060 1228500 907420 1238400 997700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1715199999.9999998 16696 3186 15832 31739;31740;31741;31742;31743 25431 25431 1850;1851 1 9606 Homo sapiens -0.025273843575405408 LLQSPCPFCDSPVF Unmodified 1665.7531 0.75309972 4678 Q9UKN8;B3KNH2 GTF3C4 General transcription factor 3C polypeptide 4 yes no 0 0 0 7.33 0.471 2 1 65.654 65.677 2;3 0.0001077 20376 20230619_1887_Aki_TMTPro18x_K_F7 108.43 99.109 22967 21716 27004 24265 23034 22248 26374 23244 24958 27518 26149 26140 24762 19783 34584 23393 24083 22444 21288 19895 27015 24288 24283 22693 26364 23806 25570 27528 26738 26369 25761 20813 34352 23436 23132 21334 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115610000 16697 4678 15833 31744;31745;31746 25432;25433 25432 2 9606 Homo sapiens -0.053146708170061174 LLQSQLQVK Unmodified 1055.6339 0.63389451 4084 Q5W009;Q96I25;Q5W011;Q5W010 RBM17 Splicing factor 45 yes no 0 0 0 3 0 1 53.291 53.344 2 1.1284E-05 15651 20230619_1882_Aki_TMTPro18x_K_F3 170.95 103.04 119950 96386 102780 107600 123890 153180 134880 121890 158800 63492 58470 54343 66469 47112 84230 74259 71524 55131 110770 88353 106220 108340 127510 150670 135960 125150 156130 67231 65096 55442 68412 50292 84574 73152 68443 52626 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22270000 16698 4084 15834 31747 25434 25434 1 9606 Homo sapiens 0.10830291402771763 LLQTDDEEEAGLLELLK Unmodified 1927.999 0.99900353 1462 A0A384NKW7;P55060-3;P55060;B4DUC5;B4DS32;B4DM67 CSE1L Exportin-2 yes no 0 0 0 4 0.816 1 1 1 65.692 65.721 3 2.5865E-18 20830 20230619_1882_Aki_TMTPro18x_K_F3 173.58 152.92 36022 29609 31783 31405 27203 34344 35548 34762 35271 40568 40839 40569 48071 38858 36950 52375 46012 54081 33277 27126 32574 31628 28878 34517 35362 35638 36197 40678 41947 41153 48295 40870 38358 52458 43992 51319 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 175570000 16699 1462 15835 31748;31749;31750 25435;25436 25435 2 9606 Homo sapiens 0.07212399047534745 LLQTGQER Unmodified 943.50869 0.50869399 4553 Q9HD33;Q9HD33-2;Q9HD33-3 MRPL47 39S ribosomal protein L47, mitochondrial yes no 0 0 0 5.5 0.5 1 1 39.198 39.288 2 0.0025266 9228 20230619_1885_Aki_TMTPro18x_K_F5 125.31 82.248 103950 64705 103700 124560 139860 147510 128760 129420 168360 111120 149970 141580 142110 123420 116290 107550 164120 147620 95976 59769 106030 121020 142120 146910 131660 133000 168310 114340 154280 141750 144130 127100 121280 110620 156450 139850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144230000 16700 4553 15836 31751;31752 25437;25438 25437 2 9606 Homo sapiens 0.034679992663768644 LLQTSNITK Unmodified 1016.5866 0.58660996 3839 Q13177;Q9Y6B5;A8KAN3;A0A024R5P0;Q13153-2;Q13153;B3KNX7;E9PM17;B7Z3K0;H9XFB4;B2RCU6;O75914-2;O75914;O75914-4;O75914-3;B1AKS5 PAK2;PAK1;PAK3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1;Serine/threonine-protein kinase PAK 3 yes no 0 0 0 2.5 0.5 1 1 50.178 50.23 2;3 0.0033027 14562 20230619_1881_Aki_TMTPro18x_K_F2 105.86 62.837 85303 69108 70711 76749 88635 95746 84203 73095 89335 76210 83540 120000 130280 70563 237220 111520 125760 91231 78761 63343 73345 77128 90547 94888 85290 76388 90518 78190 88557 118080 136180 76685 232470 110680 121160 86994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171410000 16701 3839 15837 31753;31754 25439;25440 25439 2 9606 Homo sapiens 0.07898012131738597 LLSAAYITSHLK Unmodified 1315.75 0.7499869 3149 J3QSH4;Q14119;J9JIC7 VEZF1 Vascular endothelial zinc finger 1 yes no 0 0 0 5 0 1 59.484 59.538 3 0.00018412 17754 20230619_1885_Aki_TMTPro18x_K_F5 100.02 65.769 40986 34429 39540 41101 33928 36729 40249 44282 46268 34652 42991 38871 44186 38684 40090 46767 39034 46030 37894 31574 40209 40921 35858 37651 40425 44460 46610 35678 44287 39318 44868 40329 40821 46807 37406 43701 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8464900 16702 3149 15838 31755 25441 25441 1 9606 Homo sapiens 0.1047419018277651 LLSAEFLEQHYDR Unmodified 1619.7944 0.79437091 287 Q9Y376;A0A024R496 CAB39 Calcium-binding protein 39 yes no 0 0 0 4.5 0.5 1 1 56.792 56.826 3 5.8050999999999996E-46 16583 20230619_1885_Aki_TMTPro18x_K_F5 302.87 277.55 47368 33389 45381 49891 38649 49649 45869 44164 56914 50098 52687 55213 53128 41685 52960 59763 56849 56520 43747 30717 46197 49000 40948 50064 46180 45680 57164 50481 54297 55367 54184 44408 54109 59562 54353 53718 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 384960000 16703 287 15839 31756;31757 25442 25442 1 9606 Homo sapiens 0.00926549538303334 LLSAGATK Unmodified 759.44905 0.44905385 2257 B2R860;P11908;A0A140VK41;P11908-2;H7C540 PRPS2 Ribose-phosphate pyrophosphokinase 2 yes no 0 0 0 2 0 1 46.358 46.437 2 0.0026103 12787 20230619_1881_Aki_TMTPro18x_K_F2 123.98 69.778 171900 123610 177190 193950 288820 315600 213510 215520 278510 186990 241180 222290 210650 195920 238770 155360 265880 233560 158880 113780 181320 191460 289220 307490 221600 226270 278280 191880 247790 223160 217450 200850 243310 161450 253910 221130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112930000 16704 2257 15840 31758 25443 25443 1 9606 Homo sapiens 0.059707283229954555 LLSAGATR Unmodified 787.4552 0.45520186 3683 Q53FW2;P60891;B1ALA9;A0A2R8Y7H4;P60891-2;A0A6Q8PGP2;B7ZB02 PRPS1 Ribose-phosphate pyrophosphokinase 1 no no 0 0 0 1.5 0.5 1 1 40.632 40.669 2 0.0075838 10079 20230619_1881_Aki_TMTPro18x_K_F2 107.19 60.193 259310 195530 227340 237350 274970 284500 265980 251070 323250 263770 273220 258580 258660 222330 254420 237470 346140 269570 239410 179420 234340 236880 281620 283420 270410 259160 323940 265890 281950 261480 264400 231400 263710 240260 329760 255980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 329280000 16705 3683 15841 31759;31760 25444 25444 1 9606 Homo sapiens 0.05297246554528101 LLSALEDLEVLSR Unmodified 1456.8137 0.81370936 784 A0A024RDY7;U4PSC4;Q9NPJ6 MED4 Mediator of RNA polymerase II transcription subunit 4 yes no 0 0 0 7 0 1 66.762 66.785 3 0.05668 20820 20230619_1887_Aki_TMTPro18x_K_F7 52.5 27.114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16706 784 15842 31761 25445 25445 1 9606 Homo sapiens 0.10357505829210822 LLSASPVDAAIR Unmodified 1211.6874 0.68738664 2983 F8VZ44;Q53HS1;Q9NRG9;H3BU82;B4DDU7;Q9NRG9-2 AAAS Aladin yes no 0 0 0 8 0 1 55.139 55.206 2 2.0274E-34 15802 20230619_1888_Aki_TMTPro18x_K_F8 235.66 146.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16707 2983 15843 31762 25446 25446 1 9606 Homo sapiens 0.09001044114597789 LLSDATVEK Unmodified 974.52843 0.52842638 3887 Q14320;B0S8I6 FAM50A Protein FAM50A yes no 0 0 0 5 0 1 51.4 51.475 2 5.6902E-05 14396 20230619_1885_Aki_TMTPro18x_K_F5 185.72 106.27 69390 60132 65120 67031 62708 67590 68068 67707 85438 91919 105310 96300 104260 81968 74917 107520 118580 99029 64154 55104 66475 67164 65494 68341 68889 69814 86859 91722 106950 97129 105040 86391 79278 107070 112890 94220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60130000 16708 3887 15844 31763 25447 25447 1 9606 Homo sapiens 0.04014330486484141 LLSDLNK Unmodified 801.45962 0.45961853 4803 yes yes 0 0 0 7 0 1 50.422 50.504 3 0.010428 13809 20230619_1887_Aki_TMTPro18x_K_F7 92.822 0 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16709 4803 15845 31764 25448 25448 1 9606 Homo sapiens 0.050947109774256205 LLSDPNYGVHLPAVK Unmodified 1621.8828 0.88279198 198 A0A024R2F9;Q9BTV4;A0A0S2Z5N2;Q8TEP9 TMEM43;FLJ00144 Transmembrane protein 43 yes no 0 0 0 2 0 1 57.585 57.6 3 0.00048715 17601 20230619_1881_Aki_TMTPro18x_K_F2 86.135 66.811 121900 106490 118460 134370 132220 161740 128850 124220 149030 148320 149280 142250 159920 140000 158460 168760 153570 180070 112740 97699 120940 133710 136310 160570 130750 130160 150760 148490 153600 144660 162830 146030 160960 169730 147170 170820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153130000 16710 198 15846 31765 25449 25449 1 9606 Homo sapiens 0.09672589848787538 LLSEGADVNAK Unmodified 1115.5823 0.58225287 1218 A0A2U3TZY2;A0A140VK11;Q9H078-4;Q9H078-2;Q9H078;F5H392;F5H7A5;A0A2R8Y6R5 CLPB Caseinolytic peptidase B protein homolog yes no 0 0 0 4.5 0.5 1 1 49.541 49.597 3 0.0014788 13794 20230619_1883_Aki_TMTPro18x_K_F4 86.189 60.21 170420 190620 146580 148850 168370 161510 141580 212210 176640 151240 179370 154030 177650 150720 203170 156540 219280 178860 157760 174070 151150 154220 172380 163770 145630 211410 178020 156150 183730 156290 182590 155940 206750 158630 209370 169790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42281000 16711 1218 15847 31766;31767 25450 25450 1 9606 Homo sapiens 0.029085029181715072 LLSELDQQSTEMPR Unmodified 1645.7981 0.79813565 2084 A8K622;Q59F99;O95793-2;O95793-3;O95793;Q5JW30;B3KRE0;B4DPJ9 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes no 0 0 0 4 0 2 58.838 58.841 3 4.5332E-13 17846 20230619_1883_Aki_TMTPro18x_K_F4 130.2 117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16712 2084 15848 31768;31769 25451;25452 25452 2 9606 Homo sapiens 0.001068512498477503 LLSESAQPLK Unmodified 1084.6128 0.61282471 4510 Q9H3N1;B4DZX7 TMX1;TXNDC Thioredoxin-related transmembrane protein 1 yes no 0 0 0 7 0.816 1 1 1 52.212 52.288 3 0.0021812 14518 20230619_1888_Aki_TMTPro18x_K_F8 83.998 41.756 174090 132800 161870 163780 157900 202930 173690 176880 193780 205670 198880 187240 208040 174520 161480 237330 222480 212850 160810 121870 165430 163370 165020 201560 174900 183220 196590 205760 204080 190600 209870 183760 168810 235880 212210 202460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 821960000 16713 4510 15849 31770;31771;31772 25453 25453 1 9606 Homo sapiens 0.07390281303219126 LLSFSPEEFPTLK Unmodified 1506.797 0.79699667 4040 Q5JSZ5;Q5JSZ5-5;Q9BU62 PRRC2B;BAT2L Protein PRRC2B yes no 0 0 0 1 0 1 64.294 64.294 3 0.070839 20230 20230619_1880_Aki_TMTPro18x_K_F1 34.183 22.207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16714 4040 15850 31773 25454 25454 1 9606 Homo sapiens 0.06387004943280772 LLSGDTYEAVVTAVDPVADIATLR Unmodified 2488.3061 0.30608459 996 A0A8Q3SJ36;A0A0C4DG44;A0A8Q3SIX7;A8K7G2;A0A384MDW9;O43464-2;O43464-4;O43464-3;O43464 HTRA2 Serine protease HTRA2, mitochondrial yes no 0 0 0 6 0 1 66.425 66.468 3 0.0023629 20946 20230619_1886_Aki_TMTPro18x_K_F6 67.364 56.897 1570.2 1843.6 701.99 3172.5 2430.9 2468.9 1917.1 1060.5 1411.4 1900.2 2809.1 2216.2 2721.7 0 2702.5 2772.5 2316.7 2179.9 1449.2 1696.2 826.17 3076.9 2373.5 2517.2 1944.3 1209.8 1523.5 1883.2 2809 2164.7 2762.5 0 2727.6 2706.7 2219.4 2077.3 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 3662200 16715 996 15851 31774 25455 25455 1 9606 Homo sapiens 0.1214637913885781 LLSISGK Unmodified 716.44324 0.44324019 1089;2882 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;Q9BTI9;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;Q9NX34;A0A024RAP1;V9HVU7;E5RI98;A0A7I2V5J8 NPM1;CLEC2D Nucleophosmin no no 0 0 0 3.14 0.99 2 3 1 1 53.18 53.226 2;3 0.0014458 15539 20230619_1882_Aki_TMTPro18x_K_F3 134.66 0 7329000 5758600 6038100 6394200 7479300 7639700 7462700 7221900 8588700 8461200 8863300 9003900 10016000 7510600 7450300 10824000 7288900 8691100 6765400 5278900 6264200 6423500 7653800 7624900 7559500 7439500 8699800 8501500 9129200 9069600 10056000 7972300 7632000 10695000 6985200 8272300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 55463000000 16716 1089;2882 15852 31775;31776;31777;31778;31779;31780;31781 25456;25457;25458;25459 25458 4 9606 Homo sapiens 0.07367629811335519 LLSLISIALPENK Unmodified 1409.8494 0.84936659 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;H0Y659;Q5H935 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 4.5 0.5 1 1 66.375 66.403 3 5.9169E-06 20710 20230619_1885_Aki_TMTPro18x_K_F5 122.42 107.45 20634 15586 21037 19959 22262 36766 21969 22977 32678 23880 26810 32290 28336 25771 30350 30394 30987 43386 19074 14310 21363 20005 23137 35547 22499 24440 32423 24373 27892 32166 28983 27052 30867 31190 29727 41025 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21070000 16717 594 15853 31782;31783 25460;25461 25461 2 9606 Homo sapiens 0.16083588076867272 LLSMLDDVPK Oxidation (M) 1145.6002 0.60021112 4814 yes yes 0 1 0 5.5 0.5 2 2 53.172 53.246 2 0.0049619 15121 20230619_1885_Aki_TMTPro18x_K_F5 86.794 27.444 + 715950 524440 649910 639380 422370 542360 665660 591630 88875 833230 880640 1097800 1179700 881060 755940 1248100 1118600 1042300 661080 481320 662310 635260 462530 556890 640310 608020 157650 835240 880740 1094900 1173500 935330 798830 1235300 1066200 992470 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1647599999.9999998 16718 4814 15854 31784;31785;31786;31787 25462;25463 25462 2921 2 9606 Homo sapiens 0.033235018486720946 LLSPFMPFVTEELFQR Oxidation (M) 1969.0019 0.0019208405 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32 VARS Valine--tRNA ligase yes no 0 1 0 2.5 0.5 1 1 65.98 66.001 3 4.5464E-06 21212 20230619_1881_Aki_TMTPro18x_K_F2 110.55 88.917 5111.8 3022.5 3978.4 3530.7 3923.4 4348.1 4547 6247.2 5036.2 3657.6 3874.3 4175.9 5779.1 3231.9 4749.5 7113.1 5699.8 4675.6 4709.9 2775.6 4132.1 3539.3 4099.7 4377.1 4567.7 6174.1 5054 3848.7 4115.4 4194.2 5779.5 3573.2 4912.8 6941 5437.2 4470.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30764000 16719 725 15855 31788;31789 25464 25464 440 1 9606 Homo sapiens 0.05617995691341093 LLSPGAR Unmodified 712.42317 0.42317345 1176 B8XPJ7;B8XPJ8;A0A140VJG8;P21964-2;P21964;A0A7I2V370;E7EMS6;A0A1S6YJG6;A0A4D6GI41;A0A286SD53;F8WBW9;E7EUU8;A0A7I2V3G7;H7BZ45 COMT Catechol O-methyltransferase yes no 0 0 0 1.5 0.5 1 1 40.225 40.261 2 0.070796 10179 20230619_1880_Aki_TMTPro18x_K_F1 76.833 9.7985 169950 126340 142100 157370 204110 206750 187850 178840 250530 200200 227160 238600 262950 211930 190160 251290 312620 301710 156850 115970 147670 156990 206700 204720 192190 185210 250640 202510 235710 239620 263840 221700 201730 254500 297850 286070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 316680000 16720 1176 15856 31790;31791 25465 25465 1 9606 Homo sapiens 0.055458788713735885 LLSPSNEK Unmodified 886.476 0.47599688 1642 A0A7G6J4N4;Q14694;Q14694-3;Q14694-2;H3BNA1;J3KT19;B4DDR4 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 0 0 0 7 0 1 45.367 45.452 2 1.1167E-05 11495 20230619_1887_Aki_TMTPro18x_K_F7 162.25 64.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16721 1642 15857 31792 25466 25466 1 9606 Homo sapiens 0.02821792143527091 LLSPVVPQISAPQSNK Unmodified 1676.9461 0.94612052 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2;H3BVE2;H3BRD9 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 4 0 1 60.343 60.346 3 4.7413E-11 18431 20230619_1883_Aki_TMTPro18x_K_F4 151.8 130.24 49210 49289 48014 50258 55897 68169 54201 60132 70323 51291 53393 46856 55848 52249 49166 62491 57936 50654 45557 45111 49013 50931 57472 67390 55251 61715 70006 52232 55635 48016 56654 54224 50668 61939 55298 48264 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 305800000 16722 4222 15858 31793 25467 25467 1 9606 Homo sapiens 0.13472530566059504 LLSPYSPQTQETDSAVQK Unmodified 1990.9848 0.98475045 4644 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 0 6.5 0.5 1 1 54.063 54.135 3 1.0746E-06 15663 20230619_1886_Aki_TMTPro18x_K_F6 110.12 87.648 44462 30223 40215 45426 35149 36776 46031 39384 39566 56276 51930 46985 57875 43635 48865 74371 62737 55905 41037 27811 41160 44496 37169 37902 45588 40536 41246 55652 52927 48065 58425 46752 50754 73125 59844 53319 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137630000 16723 4644 15859 31794;31795 25468 25468 1 9606 Homo sapiens 0.028897466192347565 LLSSDRNPPIDDLIK Unmodified 1694.9203 0.9202997 3093;779 H7C4F6;O00629;A0A7I2YQ95;A0A7I2V340;A0A7I2V333;A0A024RDV7;O00505;Q53F09 KPNA4;KPNA3 Importin subunit alpha-3;Importin subunit alpha;Importin subunit alpha-4 no no 0 0 1 6.5 0.5 1 1 58.019 58.08 3 9.6556E-06 17006 20230619_1887_Aki_TMTPro18x_K_F7 115.66 68.914 174760 147040 171760 180460 153680 176550 178660 174900 189350 218360 208180 205430 234960 179560 180280 246370 223980 241570 161600 134890 174510 179470 161770 178800 179090 179990 193230 217900 213810 208310 236240 189720 187070 246020 214000 229430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326570000 16724 3093;779 15860 31796;31797 25469 25469 1 9606 Homo sapiens 0.1006363632375269 LLSSEDIEGMR Unmodified 1248.602 0.60200203 3642 P53582;Q5CZ91 METAP1;DKFZp781C0419 Methionine aminopeptidase 1 yes no 0 0 0 3 0 1 53.975 54.027 2 1.2916E-06 15947 20230619_1882_Aki_TMTPro18x_K_F3 198.61 175.26 71912 62827 69325 66209 67611 73766 80859 76925 84523 84032 86292 79781 100040 80452 89731 107540 92009 88209 66504 57544 70599 66739 70705 74122 80877 78556 85991 84422 89020 81291 101140 84395 91650 106500 87986 84000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153630000 16725 3642 15861 31798 25470 25470 1 9606 Homo sapiens -0.01235489133387091 LLSSLGGFK Unmodified 920.53312 0.53311783 2863 E1NZA1;Q92616;A0A024RBS1;B4DM32 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 5 0 1 61.95 61.999 2 0.0082232 18786 20230619_1885_Aki_TMTPro18x_K_F5 88.37 45.343 427090 360180 373590 371090 389770 541260 419000 430300 679870 182460 149670 120600 146180 120380 276260 166760 166680 133950 394580 329880 384320 376220 405920 531630 428430 440520 655070 196940 178380 125560 155650 126670 271970 165360 160310 127690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89672000 16726 2863 15862 31799 25471 25471 1 9606 Homo sapiens 0.06967259419923266 LLSSVTAELPEDKPR Unmodified 1653.8938 0.8937506 4535 Q9H974-2;Q9H974-3;Q9H974;Q9H974-4 QTRTD1 Queuine tRNA-ribosyltransferase subunit QTRTD1 yes no 0 0 1 7 0 1 56.386 56.444 3 1.8248999999999999E-19 16311 20230619_1887_Aki_TMTPro18x_K_F7 215.96 189.81 429720 362310 430660 440430 359990 399400 414060 347150 387340 490390 486360 507710 523630 432020 511070 554690 511990 547650 397430 332320 436360 437870 380830 405920 413710 362490 400580 488300 496250 512000 532480 454680 520220 554930 490110 520100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 634940000 16727 4535 15863 31800 25472 25472 1 9606 Homo sapiens 0.09295947432406138 LLSSYLQK Unmodified 950.54368 0.54368251 3498 Q6FGU2;P23919;Q53F55;P23919-2;H7C312;H7BZ20;G5E9E9;H7C3A4 DTYMK Thymidylate kinase yes no 0 0 0 4 0 1 58.638 58.64 2 5.0251E-05 17754 20230619_1883_Aki_TMTPro18x_K_F4 144.38 102.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16728 3498 15864 31801 25473 25473 1 9606 Homo sapiens 0.06643242074324007 LLSTDPVAAK Unmodified 1013.5757 0.57571092 3819 Q10567-4;Q10567-3;Q10567-2;Q10567;C9J1E7;B4DS79;B4DG47 AP1B1 AP-1 complex subunit beta-1 yes no 0 0 0 7 0 1 52.7 52.77 2 7.5497E-07 14815 20230619_1887_Aki_TMTPro18x_K_F7 143.7 96.621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16729 3819 15865 31802 25474 25474 1 9606 Homo sapiens 0.06946609757471833 LLSTDPVTAK Unmodified 1043.5863 0.58627561 1172 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087X253;B4DWG4;B4E261;A0A087WZQ6;A0A087WU93;A0A087WYD1;Q96EL6 AP2B1;DKFZp781K0743 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 7 0 1 52.603 52.673 3 0.00041005 14776 20230619_1887_Aki_TMTPro18x_K_F7 86.882 58.155 74963 51052 70397 80178 68891 76675 79118 79888 87349 92271 96236 95643 95766 77714 92070 104490 95098 104400 69209 47003 71930 78492 71968 77839 79458 81735 88899 92664 98303 96354 97548 82189 93930 104530 91024 99126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101580000 16730 1172 15866 31803 25475 25475 1 9606 Homo sapiens 0.06622592411895312 LLSTFPR Unmodified 832.48069 0.48068833 2145 A8K9X5;Q9UNN5;Q9UNN5-2;B4DEJ6;B3KT28 FAF1 FAS-associated factor 1 yes no 0 0 0 4.5 0.5 1 1 53.004 53.05 2 0.0079671 15407 20230619_1883_Aki_TMTPro18x_K_F4 121.29 65.851 229330 183300 186600 215580 155550 200270 201440 189470 255040 216840 217460 198190 220610 173570 196490 236920 244510 217020 211700 168110 192850 214860 165680 203410 202080 195140 255160 217220 224860 201320 223890 183270 203090 235830 233290 206440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214410000 16731 2145 15867 31804;31805 25476 25476 1 9606 Homo sapiens 0.05774721076943479 LLSTGPTEPWSIR Unmodified 1455.7722 0.7721789 2008 F8WDX5;D6RID0;F8WCS7;F8WBH2;C9JV05;H7C128;H7C179;B5MCW3;H7C127;A8K1N6;Q9H0E9-4;Q9H0E9-2;Q9H0E9 BRD8 Bromodomain-containing protein 8 yes no 0 0 0 2 0 1 60.605 60.617 2 0.0028203 18860 20230619_1881_Aki_TMTPro18x_K_F2 107.06 71.76 42894 35729 41873 44051 43191 54778 51234 52025 60738 45613 36088 46944 52974 40608 46503 56765 45947 48966 39660 32778 42669 43944 45042 54490 51468 53158 60348 46510 39009 47371 53205 42959 47428 56317 43988 46579 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29395000 16732 2008 15868 31806 25477 25477 1 9606 Homo sapiens 0.06252369860567342 LLSTYLER Unmodified 993.5495 0.54949617 1809 A0A8V8NBT1;Q12769;G3V198 NUP160 Nuclear pore complex protein Nup160 yes no 0 0 0 1 0 1 56.326 56.326 2 0.0001111 16964 20230619_1880_Aki_TMTPro18x_K_F1 178.87 96.482 115900 95395 103960 113740 106290 132610 118780 111510 127560 124170 118770 117220 133480 102750 114180 130010 134050 121640 107080 87491 106720 113590 110710 132150 119300 115740 129150 124620 122900 118840 134800 107960 117620 129700 127980 115670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50872000 16733 1809 15869 31807 25478 25478 1 9606 Homo sapiens 0.052463405860066814 LLSVAEK Unmodified 758.4538 0.45380487 4346 Q96F86;H3BSQ0;H3BPN4 EDC3 Enhancer of mRNA-decapping protein 3 yes no 0 0 0 7 0 1 52.193 52.267 2 0.032107 14496 20230619_1887_Aki_TMTPro18x_K_F7 98.299 28.955 95333 82740 89236 96484 94818 105670 104520 101210 125180 126200 135060 142020 144150 119050 111680 153410 159490 158600 88139 75854 91289 96444 98353 106080 105470 104390 126770 126690 138510 142690 145310 125400 117010 153770 152130 150590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 833330000 16734 4346 15870 31808 25479 25479 1 9606 Homo sapiens 0.06491612465754315 LLSVNIR Unmodified 813.50724 0.50723743 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 4.5 0.5 1 1 51.768 51.818 2 0.010707 14833 20230619_1883_Aki_TMTPro18x_K_F4 117.62 0 287760 241860 258600 277770 277060 315580 298980 292420 367640 234110 224810 221520 231450 200900 299810 219600 255230 243420 265910 221720 265520 278110 287160 315730 302190 298810 364580 239620 237830 224780 239320 208950 300750 221980 244550 230990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 643500000 16735 3402 15871 31809;31810 25480 25480 1 9606 Homo sapiens 0.09302409968279335 LLTADPK Unmodified 756.43815 0.43815481 4365 Q96I99;Q3ZCW5;E9PDQ8;Q96I99-2;B7Z2D5 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 6.5 0.5 1 1 48.296 48.379 2 0.022806 12793 20230619_1887_Aki_TMTPro18x_K_F7 108.92 0 203650 137660 175630 186700 216880 254090 205050 226970 302710 249840 267050 299270 304260 263700 225160 315370 350030 345420 187890 126530 181440 185340 222070 251100 210450 234240 301340 252920 277390 300340 305790 275910 237730 317490 333670 327780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 345950000 16736 4365 15872 31811;31812 25481 25481 1 9606 Homo sapiens 0.05019325948705955 LLTDGYACEVR Unmodified 1295.618 0.61798644 1781 Q6NUN2;A3F769;A3F768;A0A8I5KX72;O15226;O15226-2;A2I829;A2I831 NKRF;NRF NF-kappa-B-repressing factor yes no 0 0 0 4 0 1 51.198 51.226 2 2.1093E-05 14595 20230619_1883_Aki_TMTPro18x_K_F4 144.77 127.74 34989 28385 33767 38235 30730 38201 40583 38909 38675 48043 50861 47508 60699 44550 40665 59940 55312 60706 32342 26067 34395 37796 32445 38632 40300 39952 40034 48029 51996 48190 60641 46905 42620 59965 52818 57631 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194940000 16737 1781 15873 31813 25482 25482 1 9606 Homo sapiens -0.017997828964780638 LLTECPPMMDTEYTK Oxidation (M) 1843.8042 0.80420859 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DS32 CSE1L Exportin-2 yes no 0 1 0 5.5 0.5 1 1 57.31 57.376 3 1.444E-05 16764 20230619_1885_Aki_TMTPro18x_K_F5 106.14 92.236 32529 29438 34979 30790 29678 33145 35562 35792 35011 37254 38747 38372 39838 37660 38527 44986 38927 47280 30118 26958 35225 31047 31390 33412 35519 36417 35859 37598 39632 38898 40585 39247 39262 45198 37299 44852 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89073000 16738 1462 15874 31814;31815 25483 25483 965 1 9606 Homo sapiens -0.08394134625177685 LLTECPPMMDTEYTK Unmodified 1827.8093 0.80929397 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DS32 CSE1L Exportin-2 yes no 0 0 0 6 0 1 61.096 61.15 3 1.7571E-14 18620 20230619_1886_Aki_TMTPro18x_K_F6 188.4 177.77 68182 56030 67368 64353 46310 73420 55688 69844 78201 85357 76333 78567 101120 74280 80076 102890 91154 96499 63041 51370 68182 64453 50245 73427 56380 71960 78396 85220 79486 79947 101350 78334 82535 102500 87145 91704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122930000 16739 1462 15874 31816 25484 25484 1 9606 Homo sapiens -0.07149830762546117 LLTEEGQK Unmodified 916.48656 0.48656157 2648 B7ZB41;B4E290;Q6NUK1-2;Q6NUK1 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes no 0 0 0 3.5 0.5 1 1 46.03 46.091 3 0.00075956 12213 20230619_1883_Aki_TMTPro18x_K_F4 122.74 82.474 55322 47532 66770 70584 78762 76713 76269 73122 106910 71698 89416 87503 87654 73438 73579 71956 107980 92836 51259 43691 67069 69440 80733 77028 77968 74937 106350 73096 92446 87635 88884 76169 76945 73514 102870 88010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98091000 16740 2648 15875 31817;31818 25485 25485 1 9606 Homo sapiens 0.02497774797961938 LLTEIHGGAGGPSGR Unmodified 1420.7423 0.74227576 3170 K7EPJ1;Q16763;Q6NXQ4;Q2QD04 UBE2S Ubiquitin-conjugating enzyme E2 S yes no 0 0 0 7.5 0.5 1 1 43.366 43.411 3 1.6017E-10 10860 20230619_1888_Aki_TMTPro18x_K_F8 150.12 131.34 42856 29861 46938 51964 51785 54221 50974 50274 52139 44537 54466 49005 52351 50069 58835 44242 53469 48910 39622 27527 47440 50650 53340 54540 51494 51497 53114 45475 55667 49603 53831 51285 59333 44874 51179 46423 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80077000 16741 3170 15876 31819;31820 25486 25486 1 9606 Homo sapiens 0.048734309152450805 LLTFMGMAVENK Oxidation (M) 1368.6781 0.67814386 4152 Q7L2H7;Q7L2H7-2;H0YCQ8 EIF3M Eukaryotic translation initiation factor 3 subunit M yes no 0 1 0 3 0 1 63.36 63.391 3 0.00012166 19836 20230619_1882_Aki_TMTPro18x_K_F3 103.43 72.002 63138 59907 68472 68030 64119 66767 68179 64110 65939 67595 68665 69553 76637 62140 75296 87678 79014 83523 58481 54891 69035 68046 66987 67584 68468 65802 67445 68181 70700 70313 77884 65703 76865 87423 75596 79358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86233000 16742 4152 15877 31821 25487 25487 2679 1 9606 Homo sapiens 0.008551914424288043 LLTFMGMAVENK Unmodified 1352.6832 0.68322924 4152 Q7L2H7;Q7L2H7-2;H0YCQ8 EIF3M Eukaryotic translation initiation factor 3 subunit M yes no 0 0 0 3.5 0.5 1 1 64.695 64.716 3 1.2275E-05 20423 20230619_1882_Aki_TMTPro18x_K_F3 113.77 90.541 62176 45600 55333 59412 45317 53233 56774 56836 66874 70029 58327 64191 67575 58745 62353 80655 77904 79795 57403 41878 56653 58787 48226 54374 56907 58178 67267 69882 60697 65239 68462 61938 64456 80589 74401 75792 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159000000 16743 4152 15877 31822;31823 25488 25488 1 9606 Homo sapiens 0.020994953050603726 LLTGELLPTDGMIR Oxidation (M) 1543.828 0.82797922 902 A0A090N7X1;A0A090N7Y2;Q9UG63;Q9UG63-2 ABCF2 ATP-binding cassette sub-family F member 2 yes no 0 1 0 7 0 1 61.89 61.928 2 0.073638 18653 20230619_1887_Aki_TMTPro18x_K_F7 66.56 37.833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16744 902 15878 31824 25489 25489 512 1 9606 Homo sapiens 0.07781834985848946 LLTGLYR Unmodified 834.49634 0.49633839 4014 Q549N5;Q9Y5M8;C9J5Z8 SRPRB Signal recognition particle receptor subunit beta yes no 0 0 0 5 0 1 54.397 54.464 2 0.009912 15605 20230619_1885_Aki_TMTPro18x_K_F5 118.69 31.849 131960 111030 117950 130100 116060 142260 146020 161510 187010 113290 102980 76716 102700 70890 126710 136260 118210 99285 121930 101800 121060 130020 121710 143320 146720 162290 184610 116070 109480 79578 105900 76830 128010 133770 113060 94763 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 256270000 16745 4014 15879 31825 25490 25490 1 9606 Homo sapiens 0.07247007593991839 LLTGQETPLYI Unmodified 1246.6809 0.68090428 4028 Q59G28;Q99767-2;Q99767 APBA2 Amyloid beta A4 precursor protein-binding family A member 2 yes no 0 0 0 5.5 0.5 1 1 65.144 65.188 2 9.7729E-06 20417 20230619_1886_Aki_TMTPro18x_K_F6 173.23 143.43 11398 9612.1 11351 11901 10172 9719.5 8786.4 10197 11677 14204 16266 16360 14598 11160 15165 16777 15984 17769 10541 8818.2 11515 11804 10616 10012 9044.7 10493 11924 14196 16401 16336 14969 11986 15466 16817 15298 16860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59592000 16746 4028 15880 31826;31827 25491 25491 1 9606 Homo sapiens 0.06743106163253287 LLTGSSYK Unmodified 867.47018 0.47018322 2718 B8ZZB8;Q96F85-2;Q96F85 CNRIP1 CB1 cannabinoid receptor-interacting protein 1 yes no 0 0 0 2.5 0.5 1 1 49 49.065 2 1.6611E-05 13704 20230619_1882_Aki_TMTPro18x_K_F3 141.39 82.184 191240 137290 164450 152910 155890 171430 169590 166100 209730 142460 148670 133530 141920 126810 179990 162780 170210 155550 176500 125900 169070 153480 163100 171860 171430 169440 208740 145120 155100 135870 146950 132910 181710 162650 162850 147870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36198000 16747 2718 15881 31828;31829 25492;25493;25494 25494 3 9606 Homo sapiens 0.0311469363185779 LLTLEVPGVTESRPSVLR Unmodified 1965.1259 0.1258758 1782 A0A8I5KZ07;Q5JR04;A0A8I5KXC3;Q9HCE1-2;Q9HCE1;Q9H8T8;B7Z700 MOV10 Putative helicase MOV-10 yes no 0 0 1 3 0 1 60.974 61.003 3 4.7073E-24 18815 20230619_1882_Aki_TMTPro18x_K_F3 211.12 170.39 22510 22332 26533 28513 36729 40696 39265 41582 47123 32995 30145 28516 30371 27637 33380 32365 33144 32472 20873 20483 26794 28446 37408 40236 39663 42160 46851 33695 31738 29136 31154 28785 33871 32460 31710 30843 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6140100 16748 1782 15882 31830 25495 25495 1 9606 Homo sapiens 0.18191789783168133 LLTLPNGER Unmodified 1011.5713 0.57129425 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 8 0 1 51.017 51.094 2 0.0075391 13985 20230619_1888_Aki_TMTPro18x_K_F8 107.1 49.922 156650 130190 159620 150940 154860 187060 164980 173130 200430 194650 200120 215590 213520 173580 201350 212550 205870 217230 144890 119370 161790 151260 161670 186080 166930 178360 202200 196210 206040 216430 216850 182520 205280 213200 197010 206240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106400000 16749 3881 15883 31831 25496 25496 1 9606 Homo sapiens 0.06597145334569632 LLTPTHSFLAR Unmodified 1254.7085 0.70845643 865 B7Z3Y3;B7Z3E1;B2R704;B7ZB64;A0A087WZ40;Q14244-5;Q14244-3;Q14244-2;Q14244-6;Q14244-4;Q14244;Q14244-7 MAP7 Ensconsin yes no 0 0 0 5 0 1 49.475 49.551 3 6.0514E-05 13566 20230619_1885_Aki_TMTPro18x_K_F5 128.01 95.174 22541 22032 22688 19155 17380 18488 25072 22974 26536 23028 22983 25448 28815 22234 29545 24262 27484 28891 20870 20141 22935 19610 18668 18871 24878 23168 26801 23344 24032 25606 29241 23166 29886 24625 26326 27386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17948000 16750 865 15884 31832 25497 25497 1 9606 Homo sapiens 0.09129054214145071 LLTQGFTNWNK Unmodified 1320.6826 0.68263561 2629 B7ZAX9;B4DZC0;O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 5 0 1 61.507 61.555 3 5.8917E-18 18570 20230619_1885_Aki_TMTPro18x_K_F5 240.1 199.38 420960 339760 372350 397230 354720 490240 384950 467670 535900 438570 408790 444660 559300 434760 345460 591500 514010 584060 388840 311570 382260 397720 371860 487900 391240 478230 532300 445220 431940 451060 555840 457290 365730 590650 490660 554560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 445840000 16751 2629 15885 31833 25498 25498 1 9606 Homo sapiens 0.03512159971842266 LLTQHENIK Unmodified 1094.6084 0.60840804 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 7 0.816 1 1 1 42.669 42.726 3 3.4075E-05 10587 20230619_1888_Aki_TMTPro18x_K_F8 152.27 108.96 188930 126090 148610 177500 169560 237560 199640 204160 352680 221040 247730 332020 346070 316600 207900 461810 433700 460460 174190 115950 154900 175700 176080 234690 204100 211330 346040 226260 263750 331720 344030 334570 227710 460800 412960 437270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 265110000 16752 2337;3778;3779 15886 31834;31835;31836 25499;25500 25500 2 9606 Homo sapiens 0.06488816880323611 LLTQHENIKNEIDNYEEDYQK Unmodified 2635.2402 0.24018987 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 1 4.5 0.5 1 1 56.033 56.069 4 1.2176999999999999E-22 16701 20230619_1883_Aki_TMTPro18x_K_F4 187.06 174.75 97903 82257 100430 97041 93102 105740 122760 108540 99844 125970 128650 108670 113920 88850 135430 103100 94671 74694 90563 75428 101700 96943 98006 106340 121360 111170 104240 125770 129940 110450 117620 93062 134900 101920 90836 71319 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 417240000 16753 2337;3778;3779 15887 31837;31838 25501;25502 25501 2 9606 Homo sapiens -0.01202061773983587 LLTQYILNLGK Unmodified 1274.7598 0.7598233 1129 O00203;O00203-3;A0A0S2Z5J4;A8K586;A0A8Q3WKJ9;A0A8Q3WL34;A0A8Q3SIS1;A0A8Q3SHS3;A0A8Q3WKK0;A0A8Q3SHW6;A0A8Q3SHR2;A0A8Q3SI03;A0A8Q3WKN2;A0A8Q3SIM7;A0A8Q3WKF8;A0A8Q3SHU2;A0A0S2Z4Z4;A0A8Q3WKI5;Q3MNE1;A0A8Q3SHP3;B4E0B2 AP3B1 AP-3 complex subunit beta-1;AP-3 complex subunit beta yes no 0 0 0 6 0 1 64.697 64.741 3 0.0034677 20224 20230619_1886_Aki_TMTPro18x_K_F6 79.659 63.521 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16754 1129 15888 31839 25503 25503 1 9606 Homo sapiens 0.13343378188164934 LLTSFLPAQLLR Unmodified 1370.8286 0.82857157 1704 P08195-4;P08195-5;P08195;P08195-3;A0A7P0Z4P5;A0A7P0TAN7;A0A7P0Z4A0;A0A7P0T9F7;F5GZS6;P08195-2;A0A7P0TBF8;B4E2Z3;F5H056;F5GZI0;A0A7P0TAS6;A0A024R599;A0A7P0T8U7;A0A7P0T8F1;H0YFX4 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 0 8 0 1 65.519 65.539 2 3.1931999999999996E-40 20155 20230619_1888_Aki_TMTPro18x_K_F8 301.75 231.94 160510 145210 126380 115200 118380 163910 125420 123790 200880 30165 33858 24407 26219 21526 76947 32983 29553 17373 148260 132700 131050 119600 124300 161170 128280 126740 193110 35715 42285 25077 29453 22887 74490 32235 28650 16711 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66323000 16755 1704 15889 31840 25504 25504 1 9606 Homo sapiens 0.15799042487878978 LLTSGYLQR Unmodified 1049.5869 0.58694431 4350 Q96FW1;Q659F9;F5H6Q1;B4DPD5;F5GYN4;F5GYJ8;F5H3F0;B3KUV5;Q96FW1-2;B4E053 OTUB1;DKFZp564E242 Ubiquitin thioesterase OTUB1 yes no 0 0 0 4 0 1 51.679 51.707 2 0.019475 14788 20230619_1883_Aki_TMTPro18x_K_F4 85.666 62.775 530530 485870 503810 535360 536210 655860 567590 513910 626460 406750 464360 446580 401610 457030 688160 469270 575850 671170 490730 445120 514770 538200 555840 650770 572130 532220 627610 418680 481850 452190 426320 471570 687330 483310 552710 634990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 378290000 16756 4350 15890 31841 25505 25505 1 9606 Homo sapiens 0.06413431851615314 LLTSQCGAAEEEFVQR Unmodified 1836.8676 0.8676122 3765 Q86WV4;P82933 MRPS9 28S ribosomal protein S9, mitochondrial yes no 0 0 0 3.5 0.5 1 1 54.096 54.129 3 5.2243E-35 16004 20230619_1882_Aki_TMTPro18x_K_F3 203.76 186.06 115810 104080 130060 124190 126820 145530 132920 136510 164260 148690 135980 154510 147740 125050 146040 166570 162960 162750 107260 95427 130850 124080 132190 145330 134660 140380 164470 149820 141510 155540 150370 132160 149580 166450 155750 154620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155400000 16757 3765 15891 31842;31843 25506;25507 25506 2 9606 Homo sapiens -0.017346898014011458 LLTSYGFIQCSER Unmodified 1572.7606 0.76062794 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;A0A8I5KPQ8;A0A8I5KS07;A0A8I5KW29;A0A8I5KYL4;A0A8I5KNL1;E9PLD4;A0A8I5KYY8;E9PKN4 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 0 2.5 0.5 1 1 60.401 60.421 3 4.2481E-36 18740 20230619_1881_Aki_TMTPro18x_K_F2 214 198.63 49027 39618 43257 51339 41747 49276 47893 51988 58421 44072 36068 39583 34613 33119 41998 42120 40386 37279 45286 36369 44451 50849 43702 50033 48259 52710 58003 44845 38038 40157 35762 34832 42487 41916 38635 35471 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 140060000 16758 88 15892 31844;31845 25508;25509 25508 2 9606 Homo sapiens -0.002841952250491886 LLTTIGK Unmodified 744.47454 0.47454032 1676;2901;949 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;A0A0A0MSA7;A0A8I5QJH9;A0A804HJV5;A0A8J9G7U8;A0A8I5KT99;A0A0U1RQK7;Q59GJ0;A0A8I5KV92;O43432-4;O43432;O43432-3;B4DZE1;B4DH17 EIF4G1;EIF4G1 variant protein;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 0 0 3.5 0.5 1 1 54.734 54.763 2 0.0044676 16262 20230619_1882_Aki_TMTPro18x_K_F3 148.07 40.41 863230 694660 750720 779110 780360 927480 894790 869910 1049200 1006400 899950 887610 1131400 842520 785650 1209000 1069500 1001300 797260 636790 772710 782070 812260 925310 900190 896170 1054700 1006400 940050 905460 1130500 890320 822960 1196100 1020100 953480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 433230000 16759 1676;2901;949 15893 31846;31847 25510;25511 25510 2 9606 Homo sapiens 0.09208202845434243 LLTVPFEK Unmodified 945.55352 0.55351892 1052 A0A0K0K1K7;O95336;M0R1L2 PGLS 6-phosphogluconolactonase yes no 0 0 0 1.5 0.5 2 2 61.57 61.575 2;3 0.0018681 19131 20230619_1880_Aki_TMTPro18x_K_F1 145.63 50.746 161030 142380 165970 175830 140110 176800 170610 168260 186700 194060 210680 218500 202760 194660 207910 253790 228850 256190 149010 130590 167880 174840 148560 178470 170830 173230 190250 195480 214780 219990 207610 204600 212760 254070 218950 243210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 355280000 16760 1052 15894 31848;31849;31850;31851 25512;25513 25512 2 9606 Homo sapiens 0.07856430079721122 LLVACCLADIFR Unmodified 1449.7472 0.74722648 3001;4592 G1UI16;Q29RF7;Q29RF7-3;H0Y9L9;Q9NTI5-4;Q9NTI5-2;Q9NTI5;B7Z5S1;Q9NTI5-3 PDS5A;PDS5B Sister chromatid cohesion protein PDS5 homolog A;Sister chromatid cohesion protein PDS5 homolog B no no 0 0 0 5 0 1 65.465 65.508 2 0.00033219 20375 20230619_1885_Aki_TMTPro18x_K_F5 135.55 86.909 60154 53464 63378 59899 52360 66851 67939 62384 65443 42606 31265 28634 33710 26487 35156 41585 38292 26317 55677 48992 63942 60084 55716 66956 67508 63528 65397 43733 33799 29663 34406 28190 35928 40677 36525 25201 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38465000 16761 3001;4592 15895 31852 25514 25514 1 9606 Homo sapiens 0.04034275461958714 LLVAGSEDGGVQLFDISGR Unmodified 1931.9953 0.99525556 3028 H0Y8P4;Q8TED0;Q8TED0-3 UTP15 U3 small nucleolar RNA-associated protein 15 homolog yes no 0 0 0 6 0 1 63.773 63.82 3 0.012089 19840 20230619_1886_Aki_TMTPro18x_K_F6 55.707 43.683 46185 42461 45518 54268 50145 49175 52439 52200 61917 49798 60068 60423 58126 53786 56941 68978 56892 70344 42734 38954 46409 53760 51742 50199 53036 53080 62417 50799 61638 60678 59358 56477 57994 69110 54528 66749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 267760000 16762 3028 15896 31853 25515 25515 1 9606 Homo sapiens 0.06653774064307072 LLVATSVAAR Unmodified 999.60768 0.60767975 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 4 0 1 50.096 50.131 2 0.00022862 14038 20230619_1883_Aki_TMTPro18x_K_F4 138.4 117.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16763 1002 15897 31854 25516 25516 1 9606 Homo sapiens 0.10786022231263814 LLVDVDESTLSPEEQK Unmodified 1800.8993 0.89928949 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 0 2.5 0.5 1 1 61.206 61.226 3 1.8301E-19 18927 20230619_1882_Aki_TMTPro18x_K_F3 207.39 188.8 216270 183140 202560 236630 224230 249670 252540 244480 264510 251400 253430 262740 291480 236960 253700 272650 279890 294830 199920 168080 207470 234700 231970 251330 253330 250350 268400 254060 262280 265330 294420 247270 260190 274610 267640 279740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 504480000 16764 3309 15898 31855;31856 25517;25518;25519 25519 3 9606 Homo sapiens 0.03087581433601372 LLVGNDDVHIIAR Unmodified 1433.7991 0.79906235 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 6.5 0.5 1 1 51.439 51.516 3 4.3003E-16 14551 20230619_1886_Aki_TMTPro18x_K_F6 213.06 151.28 329440 254400 332600 314770 294600 343570 275140 328510 408990 360250 409380 442500 392670 360800 393760 396890 461990 497580 304540 233470 336860 313390 308900 344860 283010 337400 408920 364960 419480 442580 401600 376770 404170 403880 441620 471400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 465750000 16765 594 15899 31857;31858 25520 25520 1 9606 Homo sapiens 0.09951478471748487 LLVGSEDYGR Unmodified 1107.556 0.55603811 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q14917;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4 0 1 49.191 49.229 2 5.6637E-05 13589 20230619_1883_Aki_TMTPro18x_K_F4 168.27 134.18 209810 170880 167360 201660 185040 203470 219950 232430 263440 256870 261570 294080 312610 261450 239530 331160 323990 334770 193670 156710 174030 201180 191890 206300 221080 236070 265900 259400 270840 295770 314020 274460 250020 331580 309250 317890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 444300000 16766 1022;3868 15900 31859 25521 25521 1 9606 Homo sapiens 0.006562337466903045 LLVGVDEK Unmodified 871.50148 0.50148335 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 4 0 1 53.625 53.645 3 0.0070569 15661 20230619_1883_Aki_TMTPro18x_K_F4 84.568 45.605 41081 35806 37897 38209 37741 38917 37618 35865 39521 51438 45091 49513 58028 45373 37117 56937 53132 51168 37977 32799 38753 38419 39196 39259 38014 37275 40463 51075 46575 50193 57802 47564 39103 56650 50668 48668 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47418000 16767 161 15901 31860 25522 25522 1 9606 Homo sapiens 0.060592666659431416 LLVPAAEGEDSLK Unmodified 1340.7187 0.71874635 4388 Q96PU8-5;Q96PU8-9;Q96PU8-8;Q96PU8-6;Q96PU8-3;Q96PU8;F5GXS8;F5GYM3;H0YG47;H0YGD6 QKI Protein quaking yes no 0 0 0 3.5 0.5 1 1 57.723 57.741 3 0.00072476 17393 20230619_1883_Aki_TMTPro18x_K_F4 70.089 41.921 112400 90323 109130 98163 105920 136500 114900 125290 128610 127190 123990 121100 134850 122930 125480 154480 147400 146880 103890 82775 111030 99056 110690 134830 115820 128730 130110 128280 127900 123360 136920 128380 129130 154220 140820 139590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115690000 16768 4388 15902 31861;31862 25523 25523 1 9606 Homo sapiens 0.06201572358031626 LLVPLVPDLQDVAQLR Unmodified 1788.0509 0.050919944 644 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8;Q9BSJ8-2 FAM62A;ESYT1 Extended synaptotagmin-1 yes no 0 0 0 2 0 1 65.75 65.757 3 1.168E-05 21141 20230619_1881_Aki_TMTPro18x_K_F2 99.927 89.588 9067 8489.2 6863.7 8705.2 5352.8 8187.2 10037 7798.1 7667.4 8873.9 10086 9296.5 10450 10512 10225 10325 9561.1 12082 8374.7 7771.7 7149.6 8768.8 5820.3 8308.3 9770.3 8032 8040.9 8924.1 10249 9464.8 10651 10789 10366 10478 9171.9 11448 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24319000 16769 644 15903 31863 25524 25524 1 9606 Homo sapiens 0.1884165204257897 LLVPTQFVGAIIGK Unmodified 1454.8861 0.88608645 3211 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 6.5 0.5 1 1 65.547 65.581 3 1.9532E-07 20588 20230619_1886_Aki_TMTPro18x_K_F6 120.14 0 59960 58381 57163 55757 50243 56744 65683 71349 60606 55965 55566 49887 59015 48551 63725 52361 54441 55204 55488 53409 58196 56610 53137 57669 65202 71442 61820 57178 57393 50903 60322 50351 64140 52758 52184 52400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 442810000 16770 3211 15904 31864;31865 25525;25526 25525 2 9606 Homo sapiens 0.17683884693474283 LLVQHEINTLR Unmodified 1334.767 0.76703394 3613 P49792;A0A8V8TLA0;A0A8V8TL79;A6NKT7;J3KNE0;Q7Z3J3;A0A8Q3SIN4;Q99666;O14715;A0A8Q3SII4;A0A8Q3SII5;J3KQ37;V9HWE4;D3DX73;B4DZH4;F8W705;Q99666-2 RANBP2;RGPD3;RGPD4;RGPD5;RGPD8;HEL161;hCG_1994636 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 yes no 0 0 0 4.5 3.5 1 1 48.04 48.069 3 7.7822E-31 12671 20230619_1888_Aki_TMTPro18x_K_F8 227.36 178.61 120820 97549 114200 121810 121190 146410 143150 140360 149230 140490 135150 128240 149580 133450 135130 151610 140510 144600 111660 89514 116750 121350 126010 146000 143230 143800 151140 141640 139930 130980 151560 138430 138060 151630 134410 137400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 339710000 16771 3613 15905 31866;31867 25527;25528 25528 2 9606 Homo sapiens 0.11304110788614707 LLVSASQDGK Unmodified 1016.5502 0.55022446 3730;1179;4542 Q6FHM2;P62879;C9JIS1;C9JXA5;C9JZN1;E7EP32;F5H8J8;F5H100;F5H0S8;Q59G26;E9PCP0;F1T0G5;F1T0G4;P16520-2;P16520;Q9HAV0;A0A7I2S2S9;A8K3F6;H7C5J5;A0A6Q8PFW8;A0A6Q8PFE0;A0A6Q8PFV8;A0A6Q8PG88;C9JD14;B2R6K4;A0A140VJJ8;P62873;F6X3N5;P62873-2;A0A994J3T6;F6UT28;A0A994J6X8;B1AKQ8 GNB2;GNB3;GNB4;GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3;Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 0 7 0.816 2 2 2 48.869 48.946 2;3 2.9691E-10 13099 20230619_1888_Aki_TMTPro18x_K_F8 179.1 161.63 650440 569620 657920 690320 675470 715600 776890 708770 879740 799960 872060 847010 893700 757110 807260 948820 1009200 820760 601760 522390 668200 687670 702710 721720 780500 727270 889830 805210 895850 855060 907530 793840 834240 942910 962380 781610 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2496500000 16772 3730;4542;1179 15906 31868;31869;31870;31871;31872;31873 25529;25530;25531 25531 3 9606 Homo sapiens 0.04261135235049096 LLVSGSSDSTLK Unmodified 1205.6503 0.65033243 2638 B4E303;B4E074;Q9NVX2;A0A0A0MRH0;K7EN33;Q9NVX2-2 NLE1 Notchless protein homolog 1 yes no 0 0 0 8 0 1 52.336 52.413 2 1.3968E-17 14575 20230619_1888_Aki_TMTPro18x_K_F8 212.72 145.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16773 2638 15907 31874 25532 25532 1 9606 Homo sapiens 0.05573327778188286 LLVTDMSDAEQYR Unmodified 1539.7239 0.72390808 3226 O14929;O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit yes no 0 0 0 3.5 0.5 1 1 57.489 57.507 2 3.5709E-21 17405 20230619_1882_Aki_TMTPro18x_K_F3 283.82 267.19 128230 101830 121050 124140 119330 157450 147550 142910 171240 172180 149670 153370 191590 144210 147310 201710 170470 180200 118490 93430 123610 123970 125080 156280 147840 147750 172360 171900 156410 156290 192000 152180 152160 200400 162950 171340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 247470000 16774 3226 15908 31875;31876 25533;25534 25533 2 9606 Homo sapiens -0.02436491841649513 LLVVDPETDEQLQK Unmodified 1625.8512 0.85121708 2231 B2R6A3;O14745;B3KSV9;J3QRP6 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF;Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 0 0 0 2.5 0.5 1 1 60.257 60.286 3 8.9962E-10 18491 20230619_1882_Aki_TMTPro18x_K_F3 168.61 147.55 83558 67996 78511 78500 71244 105450 115520 114070 128250 123380 101420 111070 133090 107430 104570 144050 112050 127490 77223 62346 80135 78807 75978 104710 114240 116120 128910 123830 106760 113200 133450 112900 107480 143120 107240 121210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99941000 16775 2231 15909 31877;31878 25535;25536 25536 2 9606 Homo sapiens 0.06332552304206729 LLVVTDPR Unmodified 911.54402 0.54401687 205 C9J9K3;A0A8V8TMX1;A0A024R2L6;A0A0C4DG17;A0A8V8TLA4;P08865;A0A8I5KQE6;A0A8V8TMP3;A0A024R7P5 RPSA;LOC388524 40S ribosomal protein SA yes no 0 0 0 7 0.816 1 1 1 50.873 50.951 2 0.0026119 14007 20230619_1887_Aki_TMTPro18x_K_F7 123.96 63.807 1203100 981680 1116600 1187300 1055400 1227600 1283900 1203900 1400700 1401900 1366200 1323400 1460800 1183100 1260100 1538800 1453000 1406800 1111800 900500 1141100 1182900 1107900 1237800 1284900 1237100 1419400 1403800 1407100 1342700 1478100 1244000 1297000 1532400 1388000 1337700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3418199999.9999995 16776 205 15910 31879;31880;31881 25537;25538 25537 2 9606 Homo sapiens 0.08470661794171974 LLVVYPWTQR Unmodified 1273.7183 0.71829284 2797 CON__Q3SX09;CON__P02070;B3VL05;P68871;C8C504;D1MGQ0;Q9BWU5;Q52MT0;Q6J1Z7;Q6V0K9;Q8IUL9;Q8IZI0;E9PFT6;B3VL86;B2M1S8;Q9UK54;Q9GZL9;Q9BWV6;A0A2R8Y7R2;Q4F786;P02042;Q0Z944;Q14473;Q3LR79;Q670S4;Q4TZM4;D9YZU5;A0A481SHK9;E9NGZ5;A0N071;A0A3G5AXY7;D9YZU8;B7UCU6;E7CYP2;D9YZU9;B3VL31;A0A650ATW2;D3GKD9;D9YZU7;D3GKD8;Q14403;A0A2R8Y7X9;Q9UM85;Q9UP81;F8W6P5;B5ANL9;A0A2R3Z0D6;A9YUX2;Q9UBV6;Q14484;Q9BXA2;E9M263;A0A2S1CVU8;Q3L3Q5;E9PEW8;P69891;P02100;Q14476;Q14477;D5FZW3;A0A515HFS3;Q9UNL6;Q14474;P69892 HBB;HBD;HBG1;HBG2;HBE1;beta-globin Hemoglobin subunit beta;LVV-hemorphin-7;Spinorphin;Hemoglobin subunit delta;Hemoglobin subunit gamma-1;Hemoglobin subunit epsilon;Hemoglobin subunit gamma-2 yes no 0 0 0 6.5 0.5 2 2 62.71 62.753 2;3 2.8285E-05 19052 20230619_1887_Aki_TMTPro18x_K_F7 180.54 148.06 + 330380 549240 599870 529590 934130 1063100 784050 801640 1195000 1418200 2479100 3682300 1498400 2082800 2976700 1731800 2543900 3978100 309530 501840 591740 543670 940070 1028800 812620 854010 1243500 1467700 2450600 3575300 1635200 2180500 2970700 1875100 2448100 3749300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2938399999.9999995 16777 2797 15911 31882;31883;31884;31885 25539;25540;25541 25541 3 9606 Homo sapiens 0.09238242219498716 LLVYEALEYAK Unmodified 1310.7122 0.71220441 2879 H0YB03;H0YB83;E5RH53;Q96DB5;Q96DB5-3;Q96DB5-2 RMDN1 Regulator of microtubule dynamics protein 1 yes no 0 0 0 8 0 1 64.435 64.456 3 0.0012315 19692 20230619_1888_Aki_TMTPro18x_K_F8 88.596 68.389 40250 27643 36158 44242 41879 45507 46746 46543 53338 47178 46956 50931 49310 47825 50781 57877 52287 62872 37150 25455 37209 43302 43185 45923 47044 47501 53703 47772 48621 51436 50368 49948 51738 58256 50086 59624 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31402000 16778 2879 15912 31886 25542 25542 1 9606 Homo sapiens 0.06927679197315229 LLWTTSR Unmodified 875.4865 0.48650199 173;209 A0A2R8Y804;B4DSW9;A0A2R8Y543;A0A2R8Y5C3;B4DL06;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y7Z0;B5BU28;A0A024R2Q3;A0A2R8Y5A3;P35222;A0A2R8Y6G0;A0A0S2Z487;A0A024R1X8;P14923;Q7KZ86 CTNNB1;JUP Catenin beta-1;Junction plakoglobin no no 0 0 0 4.5 0.5 1 1 52.38 52.428 2 0.015623 14808 20230619_1885_Aki_TMTPro18x_K_F5 111.04 85.141 91682 74269 101400 98299 114160 101660 104860 101360 143840 113580 96204 97018 125730 88474 91981 123990 106710 92106 84845 68193 102340 97352 117170 102600 107450 103900 142450 113700 102210 98972 125690 93474 95110 122160 101850 87874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133590000 16779 209;173 15913 31887;31888 25543 25543 1 9606 Homo sapiens 0.043778195886034155 LLYEALVDCK Unmodified 1222.6268 0.62676022 4152 Q7L2H7;J3KNJ2;Q7L2H7-2;H0YCQ8;E9PRY0 EIF3M Eukaryotic translation initiation factor 3 subunit M yes no 0 0 0 7.5 0.5 1 1 62.736 62.766 3 0.00042897 19072 20230619_1887_Aki_TMTPro18x_K_F7 105.98 83.145 137910 98943 120910 142420 106680 155570 139240 132180 181110 186580 149380 172310 234320 171300 139830 250790 228440 306600 127300 90977 124210 140340 113220 155650 139760 138130 181070 185280 158520 175570 231890 181220 149380 253440 218250 290330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 286590000 16780 4152 15914 31889;31890 25544 25544 1 9606 Homo sapiens 0.024351907399932315 LLYEALVDCKK Unmodified 1350.7217 0.72172323 4152 Q7L2H7;J3KNJ2;Q7L2H7-2;H0YCQ8;E9PRY0 EIF3M Eukaryotic translation initiation factor 3 subunit M yes no 0 0 1 2 0 1 59.947 59.959 3 2.7799E-06 18625 20230619_1881_Aki_TMTPro18x_K_F2 134.2 97.348 107200 70817 103570 117740 87777 148200 109050 112310 169140 168560 136190 172860 248170 205710 103640 341200 306340 394280 98976 65258 105430 115330 93530 146530 110570 118700 167790 167610 146230 176660 243120 218440 120460 342780 291750 373610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77432000 16781 4152 15915 31891 25545 25545 1 9606 Homo sapiens 0.06039124211156377 LLYGNDAK Unmodified 892.46543 0.46543219 4474 S4R369;Q9BZE1;H0Y4J2;Q6TGK8;A6NHR2 MRPL37 39S ribosomal protein L37, mitochondrial yes no 0 0 0 7 0 1 48.163 48.25 3 0.0034703 12786 20230619_1887_Aki_TMTPro18x_K_F7 95.909 60.809 105090 86815 90006 94985 102190 138060 105120 103150 174330 47535 55880 49936 53579 44208 71706 57192 58644 54306 97067 79557 92931 95815 105640 135470 107840 106300 168500 51397 62787 50491 55661 46478 71794 57151 56206 51626 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18352000 16782 4474 15916 31892 25546 25546 1 9606 Homo sapiens 0.014898094890895663 LLYNNVSNFGR Unmodified 1295.6622 0.66223452 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;J3KS13 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 4.5 0.5 1 1 54.556 54.598 2 7.4672E-23 15639 20230619_1885_Aki_TMTPro18x_K_F5 250.12 209.09 236520 203470 224660 238470 200810 253510 249260 243280 272740 296480 275950 278800 304590 242880 275270 338540 284380 300600 218680 186550 228980 238190 212050 254940 249290 250670 276840 296200 284260 282670 308450 256810 281290 336340 272120 285850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1450900000 16783 826 15917 31893;31894 25547;25548 25548 2 9606 Homo sapiens 0.02622989312021673 LLYNRPGTVSSLK Unmodified 1446.8195 0.81946344 3032 H0Y993;P35659;B4DFG0;A0A494C028;P35659-2;B4DNW3;H0Y8X0;D6RDA2 DEK Protein DEK yes no 0 0 1 5.5 0.5 1 1 48.437 48.515 3 5.5277E-06 13261 20230619_1886_Aki_TMTPro18x_K_F6 129.77 92.241 1236100 1032000 1084300 1183600 1123600 1471700 1105000 1155700 1481600 360710 317310 230450 294910 219750 583930 400640 350750 193250 1142000 946090 1115400 1186500 1166400 1458500 1126400 1181400 1438100 405600 379410 240770 315670 236510 574760 388730 336760 186330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 386460000 16784 3032 15918 31895;31896 25549 25549 1 9606 Homo sapiens 0.11392649131562393 LLYPDHFHLLR Unmodified 1422.7772 0.7772047 105 Q9BPW0;H0YDU8;Q53FR0;A0A024R0Q7;P53041;A8MU39;B4DLP6;B4DDZ8;B2R6R6;Q59F46;B7Z1I1 PPP5C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 5 yes no 0 0 0 3 0 1 52.918 52.977 4 4.1521E-06 15445 20230619_1882_Aki_TMTPro18x_K_F3 147.75 140.78 24475 20638 25276 29275 19995 21106 30392 28041 34244 29799 28164 31034 30628 27800 25353 33165 35733 35820 22642 18961 25558 28745 21454 22119 30152 28235 34412 30061 29307 31333 30958 29064 26489 33365 34089 33993 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37958000 16785 105 15919 31897 25550 25550 1 9606 Homo sapiens 0.0827271851385376 LLYPLGGQTNLR Unmodified 1343.7561 0.75613491 4053 Q5SRE5;Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog yes no 0 0 0 5 0 1 57.701 57.76 2 1.1424E-12 16985 20230619_1885_Aki_TMTPro18x_K_F5 202.2 148.05 44813 35114 42314 46291 41828 55270 48028 44805 50827 54692 52790 51340 54672 50941 53110 59996 52598 53967 41407 32244 43221 45930 43727 54939 48156 46768 51730 54653 54153 52268 55691 53014 54045 59795 50340 51317 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20413000 16786 4053 15920 31898 25551 25551 1 9606 Homo sapiens 0.09800708414331893 LLYPPETGLFLVR Unmodified 1516.8654 0.865351 2025 B5BU52;B2R6Q4;A8K3B6;P41240;B4DMZ0;Q53EL3;H3BUM9;H3BU69 CSK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase CSK yes no 0 0 0 3.5 0.5 1 1 64.252 64.272 2 0.0064629 20126 20230619_1883_Aki_TMTPro18x_K_F4 91.584 55.189 27598 24697 31702 32494 27987 33959 33906 35097 37913 39196 39755 37870 37413 31554 35872 39247 42837 36084 25566 22666 31817 32196 29536 34243 33982 35881 38476 39344 40588 38295 38189 33162 36904 39133 40872 34331 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47307000 16787 2025 15921 31899;31900 25552;25553 25553 2 9606 Homo sapiens 0.12759294313786995 LLYTFPGWK Unmodified 1123.6066 0.60661712 962 A0A0A0MTB8;Q8NI36 WDR36 WD repeat-containing protein 36 yes no 0 0 0 6 0 1 63.625 63.673 3 0.0041788 19785 20230619_1886_Aki_TMTPro18x_K_F6 76.478 51.092 47147 40721 44286 47852 48706 47302 51135 49104 50095 45195 47523 44525 52343 49691 44331 62192 57108 54608 43589 37335 45306 47744 50248 47941 51388 49950 50990 45880 49072 45466 52940 51715 46023 61820 54500 51956 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42142000 16788 962 15922 31901 25554 25554 1 9606 Homo sapiens 0.049758078623654 LMAEGAPK Oxidation (M) 831.41604 0.41603916 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;E7EPI4 L1CAM Neural cell adhesion molecule L1 yes no 0 1 0 5 0 1 40.237 40.327 2 0.021907 9680 20230619_1885_Aki_TMTPro18x_K_F5 81.191 46.091 59873 42659 59167 68403 57622 61823 60919 72519 81336 81135 99268 102930 89234 76059 94457 70037 106140 96090 55313 39278 60188 66849 60085 63233 61920 73565 82388 82164 100600 102520 91638 79049 96458 72025 101370 91028 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25116000 16789 2005 15923 31902 25555 25555 1260 1 9606 Homo sapiens -0.00641221791352109 LMAELVHNR Oxidation (M) 1097.5652 0.56516301 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8;E5RIW1 XPO7 Exportin-7 yes no 0 1 0 6 0 1 37.625 37.701 3 0.000257 8616 20230619_1886_Aki_TMTPro18x_K_F6 118.18 93.255 58584 48903 49460 55977 61038 59256 58384 62171 81715 68147 70447 73239 92693 67228 70152 86424 78559 69551 54108 44832 51203 56006 62415 59773 59737 63461 81472 68738 73776 73943 92754 70581 72280 85557 75021 66272 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20839000 16790 2083 15924 31903 25556 25556 1306 1 9606 Homo sapiens 0.020283038313891666 LMAELVHNR Unmodified 1081.5702 0.57024839 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8;E5RIW1 XPO7 Exportin-7 yes no 0 0 0 8 0 1 46.838 46.886 3 2.1027E-06 12197 20230619_1888_Aki_TMTPro18x_K_F8 178.94 150.69 40492 35908 37647 40593 36178 41508 42298 44266 48524 39705 41344 44180 45483 36030 48725 40906 43993 45955 37440 32907 38478 40637 37883 41971 42493 44910 48771 40513 42975 44363 46421 37711 49185 41339 42151 43587 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148030000 16791 2083 15924 31904 25557 25557 1 9606 Homo sapiens 0.03272607694020735 LMAFEHR Unmodified 902.44326 0.44325696 4769 yes no 0 0 0 7 0.816 2 2 2 39.73 39.777 3 0.011968 9374 20230619_1888_Aki_TMTPro18x_K_F8 89.673 61.161 + 882410 697390 764670 781230 925930 1020900 922370 920070 1446300 1131100 1271300 1227700 1313600 1206900 1111700 1456300 1418300 1321600 814870 639330 789110 785430 950230 1012000 946040 952310 1435700 1135900 1313700 1242000 1330800 1258100 1152800 1450900 1353400 1257000 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 1584899999.9999998 16792 4769 15925 31905;31906;31907;31908;31909;31910 25558;25559;25560;25561 25561 4 9606 Homo sapiens -0.01186693460317656 LMAPYTPFLTELMYQNLK Unmodified 2172.0999 0.099920326 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0 1 67.054 67.096 3 2.8335E-07 20997 20230619_1885_Aki_TMTPro18x_K_F5 98.439 82.804 6213.1 5469.4 6229.6 5246 3584.2 6446.3 5888.3 5791.7 7979.4 9918.4 7057.5 7111 7347.9 6348.7 6860.6 8586.3 11115 12758 5747.9 5005.5 6284.3 5338.2 4017.3 6410.3 5870 6068.6 7986.1 9715.6 7297.1 7314.1 7474.3 6703.6 7229.4 8817 10605 12068 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7672700 16793 1736 15926 31911 25562 25562 1 9606 Homo sapiens 0.0607543622504636 LMAVPNLFMLETVDSVK Oxidation (M) 1921.9893 0.98930724 2819 D3DSW3;O94903;E5RG77;A8K520;B3KMP6;E5RFX7;H0YBG2 PROSC Proline synthase co-transcribed bacterial homolog protein yes no 0 1 0 2 0 1 65.306 65.313 3 0.0035403 20893 20230619_1881_Aki_TMTPro18x_K_F2 68.173 41.144 5649.6 6556.6 5289.3 6768.9 4283.9 4819.8 7012.3 6913.4 5182.4 6929.8 8184.8 7601.1 8050.4 7027.2 7872.2 8151.8 7855 7268.8 5234.9 5999 5398.5 6797 4597.4 5073.3 6858.3 6921.6 5505.1 7015.8 8248.9 7671.6 8211 7324.2 8008.6 8124.9 7511.7 6915.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12531000 16794 2819 15927 31912 25563 25563 1680;1681 1 9606 Homo sapiens 0.0651921623675662 LMCELGNDVINR Unmodified 1432.6803 0.68026913 3915 Q15057;A0A0U1RQT1;H7C3K3 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes no 0 0 0 6 0 1 58.209 58.278 2 0.01852 17398 20230619_1886_Aki_TMTPro18x_K_F6 69.276 42.161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16795 3915 15928 31913 25564 25564 1 9606 Homo sapiens -0.018763798197824144 LMDEAVLALR Unmodified 1129.6165 0.61652988 2863 E1NZA1;Q92616;A0A024RBS1;B4DM32 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 5.5 0.5 1 1 62.167 62.217 2 3.3204E-06 19109 20230619_1886_Aki_TMTPro18x_K_F6 169.12 107.16 114290 89285 100920 99895 90383 115560 113510 107240 123640 116170 111400 114560 128830 105490 118410 134220 121660 140150 105550 81855 103490 100260 95493 115450 113420 110380 124910 116900 115670 116090 130410 110670 120860 134690 116500 132990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107980000 16796 2863 15929 31914;31915 25565 25565 1 9606 Homo sapiens 0.056906278054157156 LMDEVAGIVAAR Oxidation (M) 1259.6544 0.65437195 3205 O00154-4;O00154-6;O00154-7;O00154;O00154-5;B4DUX0;K7EKP8;O00154-2;O00154-3 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 1 0 5 0 1 55.426 55.491 2 0.0002598 16052 20230619_1885_Aki_TMTPro18x_K_F5 111.61 85.164 41355 33287 42040 43576 38989 78624 43143 37486 125020 53730 64104 59484 61979 56049 48798 60781 66815 63942 38241 30561 42655 43569 41316 75798 45702 41579 120020 53848 68448 60026 62769 58166 50912 61150 63734 60710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30329000 16797 3205 15930 31916 25566 25566 1884 1 9606 Homo sapiens 0.03493094000259589 LMDEVAGIVAAR Unmodified 1243.6595 0.65945733 3205 O00154-4;O00154-6;O00154-7;O00154;O00154-5;B4DUX0;K7EKP8;O00154-2;O00154-3 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 6.5 0.5 1 1 63.047 63.08 2 3.7985E-05 19220 20230619_1887_Aki_TMTPro18x_K_F7 139.43 104.33 87238 64416 91299 82982 67016 80646 93993 77744 85852 90495 95501 103850 113750 92943 92023 106410 99327 116030 80648 59150 92004 82272 72252 81647 92972 80041 88330 91175 98386 104440 114450 96972 94444 107210 95080 110040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 566670000 16798 3205 15930 31917;31918 25567;25568 25568 2 9606 Homo sapiens 0.04737397862891157 LMDFQAHR Unmodified 1016.4862 0.48618441 4095 Q68EM7;Q68EM7-5;Q68EM7-6;Q68EM7-3;Q68EM7-7;B4DVF3 ARHGAP17 Rho GTPase-activating protein 17 yes no 0 0 0 7.5 0.5 1 1 43.301 43.346 3 0.00045148 10821 20230619_1888_Aki_TMTPro18x_K_F8 140.09 114.15 39646 24332 30499 31601 35728 35687 35428 33910 40679 28054 30116 27841 26789 24354 31727 30330 34022 28288 36532 22364 31821 31370 36690 35742 35892 34615 40684 28685 31248 28175 27703 25543 32292 30276 32490 26911 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24414000 16799 4095 15931 31919;31920 25569 25569 1 9606 Homo sapiens -0.02139923402887689 LMDHVGTEPSIK Oxidation (M) 1341.6599 0.65985126 1878 B2RE46;A0A994J5J1;P04844-2;P04844;Q5JYR4;Q5JYR7 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 1 0 5 0 1 42.807 42.89 3 0.0011822 10723 20230619_1885_Aki_TMTPro18x_K_F5 87.641 72.375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16800 1878 15932 31921 25570 25570 1206 1 9606 Homo sapiens 0.002687727920601901 LMDHVGTEPSIK Unmodified 1325.6649 0.66493664 1878 B2RE46;A0A994J5J1;P04844-2;P04844;Q5JYR4;Q5JYR7 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 0 0 5 0 1 47.459 47.536 3 0.00869 12695 20230619_1885_Aki_TMTPro18x_K_F5 70.089 55.528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16801 1878 15932 31922 25571 25571 1 9606 Homo sapiens 0.01513076654669021 LMDLDVEQLGIPEQEYSCVVK Unmodified 2464.1866 0.18656308 3437 Q6FHF5;P12004;Q6FI35 PCNA Proliferating cell nuclear antigen yes no 0 0 0 4 0.816 1 1 1 64.335 64.363 3 5.5173E-08 20178 20230619_1883_Aki_TMTPro18x_K_F4 104.84 95.741 15361 9058.3 13395 14661 11822 14347 15770 14440 15418 18082 16664 16725 17764 14877 14970 21748 15823 21046 14164 8348.9 13758 14334 12520 14523 15661 14848 15791 18032 17087 16984 17961 15772 15360 21682 15167 19978 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 543910000 16802 3437 15933 31923;31924;31925 25572 25572 1 9606 Homo sapiens 0.013037261982844939 LMDLLGEGLK Unmodified 1087.5947 0.59473181 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 64.222 64.247 3 0.00016592 19645 20230619_1888_Aki_TMTPro18x_K_F8 120.33 69.065 174730 122670 138720 172400 115620 177510 153310 169060 211900 206020 189100 229710 240350 209540 163190 258060 239460 276480 161150 112770 143820 170000 123540 178740 154240 174280 211720 206990 197510 231360 240140 219380 172050 259270 228630 262270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 394190000 16803 3650 15934 31926;31927 25573;25574 25574 2 9606 Homo sapiens 0.05443823056884867 LMDLLGEGLKR Unmodified 1243.6958 0.69584284 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 1 3 0 1 61.904 61.933 3 0.030797 19199 20230619_1882_Aki_TMTPro18x_K_F3 54.023 30.647 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16804 3650 15935 31928 25575 25575 1 9606 Homo sapiens 0.08374274759580658 LMDQLEALKK Unmodified 1187.6584 0.6583947 851 A0A087WY55;Q9NP79;Q9C063 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes no 0 0 1 2 0 1 59.847 59.86 3 4.9504E-05 18526 20230619_1881_Aki_TMTPro18x_K_F2 140.39 98.687 187530 151800 169550 190610 159500 203110 198630 181690 200230 221770 203910 189760 197640 159250 191210 196650 190720 186070 173250 139300 173750 189430 167740 203890 198040 188220 204180 220970 208700 193030 201530 167320 194560 196430 182460 176860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82823000 16805 851 15936 31929 25576 25576 1 9606 Homo sapiens 0.07207183493960656 LMDQNLK Oxidation (M) 876.4375 0.43750288 1095 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;A0A494C0P6;Q6LDX7;Q8NI98;A0A024R4K5 TPM3;DKFZp686J1372;TPM3-ROS1;OK/SW-cl.5;hCG_1787567 Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor yes no 0 1 0 6 0.816 1 1 1 42.997 43.081 2 0.019428 10811 20230619_1886_Aki_TMTPro18x_K_F6 97.798 28.883 245740 170910 222870 231600 287200 306170 274120 291410 340920 277160 316680 314730 310650 253250 271360 309780 365180 323880 226840 157070 229320 229850 292950 303550 279210 298220 342370 282100 325720 315800 315420 266300 282000 311070 348210 307630 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 246380000 16806 1095 15937 31930;31931;31932 25577 25577 671 1 9606 Homo sapiens -0.005658367626438121 LMDVGLIAIR Oxidation (M) 1115.6373 0.63726532 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 1 0 1 0 1 59.381 59.381 2 0.005162 18240 20230619_1880_Aki_TMTPro18x_K_F1 107.1 81.7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16807 2088 15938 31933 25578 25578 1318 1 9606 Homo sapiens 0.08407218185107013 LMDVGLIAIR Unmodified 1099.6424 0.6423507 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 2.5 0.5 1 1 62.88 62.9 2 0.037348 19953 20230619_1881_Aki_TMTPro18x_K_F2 68.224 27.194 94399 55261 78502 73764 65492 72064 103860 71066 84593 87708 69946 44798 82451 71786 102480 93344 78162 61204 87011 50819 80864 72968 70047 72977 101810 73195 86732 86486 72921 48462 84700 74288 102450 91701 74902 58535 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 805170000 16808 2088 15938 31934;31935 25579 25579 1 9606 Homo sapiens 0.09651522047715844 LMDVMAK Unmodified 806.40303 0.40303163 2066 B3KY12;A8K7V1;A8K566;Q12874;Q53HM6;B4DW90 SF3A3 Splicing factor 3A subunit 3 yes no 0 0 0 8 0 1 56.022 56.085 2 0.014418 16174 20230619_1888_Aki_TMTPro18x_K_F8 105.12 59.804 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16809 2066 15939 31936 25580 25580 1 9606 Homo sapiens -0.007913761750955928 LMEALEPPLEEQQI Unmodified 1638.8175 0.81747411 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 2 0 1 65.479 65.486 3 0.021843 20977 20230619_1881_Aki_TMTPro18x_K_F2 42.789 26.157 14483 13479 12630 14042 13685 18313 13581 15122 17213 16058 18261 17134 16398 16769 16716 18522 15629 19601 13389 12342 13011 14193 14165 18118 13818 15688 17366 16218 18598 17342 16826 17391 16944 18641 14991 18591 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7617800 16810 4372 15940 31937 25581;25582 25581 2 9606 Homo sapiens 0.023618075408194272 LMEEIMSEK Oxidation (M) 1124.5093 0.5093472 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3QSF1 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 yes no 0 1 0 3 0 2 52.608 52.667 2;3 0.046483 15346 20230619_1882_Aki_TMTPro18x_K_F3 44.882 28.22 61081 48389 68991 63171 83689 67239 68955 71958 79022 83245 86238 84926 97176 77172 76941 91183 85333 94513 56529 44427 69571 62658 85158 67859 70731 73472 80292 83563 88591 85888 97827 80637 79139 91552 81628 89700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94188000 16811 3137 15941 31938;31939 25583;25584 25583 1821 2 9606 Homo sapiens -0.047927101911000136 LMEEIMSEK Unmodified 1108.5144 0.51443258 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3QSF1 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 4 0.816 1 1 1 62.074 62.101 3 2.0664E-06 19208 20230619_1883_Aki_TMTPro18x_K_F4 158.76 98.319 161990 144230 164990 176120 133350 181940 161220 169240 192050 199920 173370 161460 213570 157190 150960 226850 192720 182830 149890 132280 166980 175320 142070 183170 161980 174570 193310 199240 180370 165620 213600 166060 157330 224140 183930 174160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 311640000 16812 3137 15941 31940;31941;31942 25585;25586 25586 2 9606 Homo sapiens -0.03548406328468445 LMELFPANK Oxidation (M) 1077.5529 0.55286699 4151 Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;Q53FN7;Q7L1Q6-2;D3DN77;C9IZ80;B3KU41 BZW1;hCG_2022736 Basic leucine zipper and W2 domain-containing protein 1 yes no 0 1 0 1 0 1 57.528 57.528 3 0.023574 17442 20230619_1880_Aki_TMTPro18x_K_F1 57.598 31 20939 15885 21811 17346 18285 18238 19019 18683 21460 22913 21261 19723 26397 18940 20771 24963 20292 19107 19360 14562 21998 17429 19276 18398 19224 19167 21737 22831 22033 20150 26483 19892 21217 24651 19411 18214 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22770000 16813 4151 15942 31943 25587 25587 2677 1 9606 Homo sapiens 0.017192673683439352 LMELFPANK Unmodified 1061.558 0.55795237 4151 Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;Q53FN7;Q7L1Q6-2;D3DN77;C9IZ80;B3KU41 BZW1;hCG_2022736 Basic leucine zipper and W2 domain-containing protein 1 yes no 0 0 0 1.5 0.5 1 1 62.207 62.212 3 0.0044895 19566 20230619_1881_Aki_TMTPro18x_K_F2 74.486 57.854 159470 148270 156800 157700 135230 161650 151900 155700 171500 182590 156870 158390 197660 139300 160570 190520 175740 167940 147560 135780 159190 158620 142740 163070 152880 160190 173190 182330 163420 161250 198490 147160 164930 189280 167940 159780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 101890000 16814 4151 15942 31944;31945 25588;25589 25588 2 9606 Homo sapiens 0.029635712309755036 LMELHFK Unmodified 916.48406 0.48405915 814 A0A087WUB9;Q8WYA6;Q8WYA6-3;Q8WYA6-2;Q8WYA6-4 CTNNBL1 Beta-catenin-like protein 1 yes no 0 0 0 2 0 1 53.687 53.715 3 0.0015483 16089 20230619_1881_Aki_TMTPro18x_K_F2 135.16 86.364 98273 75135 101430 103750 88158 111040 97522 101950 124430 114170 111600 92918 125060 97408 120170 136790 128720 131160 90857 69035 102590 102500 93015 111470 98664 105090 124730 114140 115580 95580 126930 102480 122850 136450 123090 124630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53186000 16815 814 15943 31946 25590 25590 1 9606 Homo sapiens 0.0224764785930347 LMELHGEGSSSGK Oxidation (M) 1346.6136 0.61362935 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;H0Y9Y4;D6R9B6 RPS3A 40S ribosomal protein S3a yes no 0 1 0 4.75 1.48 1 1 1 1 38.147 38.21 3 0.00089053 8583 20230619_1887_Aki_TMTPro18x_K_F7 88.075 73.643 97109 60737 117140 123320 144760 143040 116680 138900 110560 108250 152750 146110 103500 86664 162020 71413 112240 97720 89815 56150 117750 119540 147200 142970 119240 141320 114590 112100 152650 144520 109870 90558 160470 73801 107770 92590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125530000 16816 3694 15944 31947;31948;31949;31950 25591;25592 25592 2383 2 9606 Homo sapiens -0.045812921100377935 LMELHGEGSSSGK Unmodified 1330.6187 0.61871473 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;H0Y9Y4;D6R9B6 RPS3A 40S ribosomal protein S3a yes no 0 0 0 8 0 1 42.635 42.637 3 1.2317E-12 10560 20230619_1888_Aki_TMTPro18x_K_F8 164.68 128.4 62101 51214 55098 61548 61583 71976 62924 65130 73608 77303 76406 90955 81091 68985 58963 84334 94478 90278 57372 46974 56693 61440 63552 71830 63711 67332 74540 77871 78534 90910 81600 72694 62444 84757 90024 85699 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41243000 16817 3694 15944 31951 25593 25593 1 9606 Homo sapiens -0.03336988247406225 LMETQEEDVVLLTAGEHNK Unmodified 2155.0467 0.046698781 2038 A8K4A8;Q6PI48;Q9H9J7;Q9NVT8;A0A3B3ISK7;A0A3B3ITK9;A0A3B3ITS3;Q9H9M6 DARS2 Aspartate--tRNA ligase, mitochondrial yes no 0 0 0 2 0 1 59.223 59.236 3 2.4769E-08 18332 20230619_1881_Aki_TMTPro18x_K_F2 120.08 103 24407 21335 24866 26877 19107 27987 26091 24123 28314 29006 27427 32557 31061 28402 27043 44719 37357 63570 22582 19574 25156 26698 20542 28111 25975 25056 28693 29164 28377 32763 31425 30324 28248 45653 35825 60083 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14233000 16818 2038 15945 31952 25594 25594 1 9606 Homo sapiens 0.015377299760984897 LMFEELR Unmodified 936.47389 0.47388839 4728 Q9Y3I0;B4DNA0;B4DNG5;B4DXF1 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 4.5 0.5 1 1 57.167 57.2 2 0.0074515 17143 20230619_1883_Aki_TMTPro18x_K_F4 125.08 84.139 298750 255690 281500 278770 243990 309580 310720 312960 328470 302980 282560 288510 318420 268170 310890 340730 327560 316300 276190 234270 286870 280200 258520 310760 310030 319180 331800 306320 293760 292940 323520 281130 317340 339800 313160 300730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 223730000 16819 4728 15946 31953;31954 25595;25596 25595 2 9606 Homo sapiens 0.0031104013406775266 LMFTAFLPDSTGSFTR Unmodified 1789.8709 0.87090667 1551 A0A494C157;A0A494C1E9;D6RH30;P19838;P19838-2;P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes no 0 0 0 5 0 1 65.115 65.159 3 0.014307 20238 20230619_1885_Aki_TMTPro18x_K_F5 59.513 47.348 10544 7768.4 7480.7 7405.9 7127.3 7671.9 7324 7833.6 8895.6 8671.6 10518 9195.6 11271 8844.2 8127.1 8554 8082.2 10112 9720.4 7114 7846.1 7520.3 7446 7747.8 7427.4 8013.1 9036.5 8735.9 10734 9303 11321 9125.7 8320 8687.8 7747.5 9580.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15727000 16820 1551 15947 31955 25597 25597 1 9606 Homo sapiens 0.007566050432615157 LMGEDEKPAAK Oxidation (M) 1203.5805 0.58053831 2200 B1AQP2;Q9UHV9 PFDN2 Prefoldin subunit 2 yes no 0 1 1 4 0.816 1 1 1 39.98 40.043 3 0.0048673 9536 20230619_1883_Aki_TMTPro18x_K_F4 72.958 45.86 265760 202130 248880 271100 310030 302970 287460 294460 313050 314770 371610 337200 307180 275160 359250 283850 315390 250210 245500 185670 255220 268480 316320 303820 292030 301930 319770 317660 375570 339210 318010 286190 361530 283560 301740 238240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210290000 16821 2200 15948 31956;31957;31958 25598 25598 1370 1 9606 Homo sapiens -0.013108741620953879 LMGEDEKPAAK Unmodified 1187.5856 0.58562368 2200 B1AQP2;Q9UHV9 PFDN2 Prefoldin subunit 2 yes no 0 0 1 5 0.816 1 1 1 43.804 43.876 3 0.0023283 11142 20230619_1885_Aki_TMTPro18x_K_F5 88.338 67.385 199180 166090 178340 179530 191760 203390 188900 188550 218750 236940 248560 220440 252450 199710 230230 216130 222500 172520 184040 152190 183080 180600 198070 203620 191630 194920 222470 236350 253590 223850 256310 207570 233970 214600 212610 164500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 362840000 16822 2200 15948 31959;31960;31961 25599 25599 1 9606 Homo sapiens -0.0006657029946381954 LMGLEALK Unmodified 873.49937 0.49937486 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;B4DYC8;H0Y914;D6RIZ7 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 1.5 0.5 1 1 60.907 60.912 2 0.0016577 18818 20230619_1880_Aki_TMTPro18x_K_F1 124.08 55.658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16823 2633 15949 31962;31963 25600;25601 25600 2 9606 Homo sapiens 0.05756514656479794 LMHGILTEQK Unmodified 1168.6274 0.62742892 2846 D6RCD0;Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes no 0 0 0 1 0 1 48.623 48.623 3 1.3168E-05 13779 20230619_1880_Aki_TMTPro18x_K_F1 146.68 123.16 113610 72356 101330 112380 136650 157720 155510 152430 199320 147850 148620 145250 160340 136760 159100 176990 168000 174350 104810 66628 104600 110740 139790 155830 156930 155900 198410 149720 155390 147380 163250 143480 162400 177010 160700 165600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128140000 16824 2846 15950 31964 25602 25602 1 9606 Homo sapiens 0.049860301797025386 LMHGILTEQK Oxidation (M) 1184.6223 0.62234354 2846 D6RCD0;Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes no 0 1 0 8 0 1 42.522 42.525 3 0.0019867 10555 20230619_1888_Aki_TMTPro18x_K_F8 80.688 66.453 39546 28316 44765 45111 54431 54527 52998 51994 61907 44806 61392 58500 57649 50033 52298 57176 58813 62411 36579 26069 45184 44281 55683 54353 53793 53106 62464 46116 62824 58522 58711 52260 53663 57623 56233 59210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28452000 16825 2846 15950 31965 25603 25603 1699 1 9606 Homo sapiens 0.037417263170937076 LMHQAALLGQALQDSR Unmodified 1750.9148 0.91483717 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7;E9PKD3;A0A0B4J225;E9PIZ5 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 0 3 0 1 57.896 57.927 3 1.4755E-77 17593 20230619_1882_Aki_TMTPro18x_K_F3 270.21 254.07 32019 20875 28630 31866 27662 40870 34409 30791 48464 42099 36061 44588 55740 47439 44635 64896 60692 65169 29544 19217 29386 31369 29106 40373 34714 32464 48096 42061 38497 45261 55767 49767 46581 64879 57945 61879 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26490000 16826 682 15951 31966 25604 25604 1 9606 Homo sapiens 0.06941634260283536 LMIEMDGTENK 2 Oxidation (M) 1311.5687 0.56865299 293;3183 A0A024R4F1;P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;A4UCS8;L0R849 ENO1;EDARADD Alpha-enolase;Enolase no no 0 2 0 2.2 0.748 1 2 2 46.174 46.237 2;3 0.0013335 12404 20230619_1882_Aki_TMTPro18x_K_F3 82.803 57.982 459950 370250 404880 472280 514310 518360 497460 482100 546720 491720 579650 530890 575950 484780 544900 662830 569450 613170 424840 339840 417870 469050 524860 519960 504050 495380 555320 497770 592710 536230 586420 510920 556680 660070 544910 582750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1952799999.9999998 16827 293;3183 15952 31967;31968;31969;31970;31971 25605;25606;25607 25606 179;180 3 9606 Homo sapiens -0.07466858967563894 LMIEMDGTENK Oxidation (M) 1295.5737 0.57373837 293;3183 A0A024R4F1;P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;A4UCS8;L0R849 ENO1;EDARADD Alpha-enolase;Enolase no no 0 1 0 3.38 1 3 4 4 2 50.869 50.924 2;3 1.3934E-06 14871 20230619_1883_Aki_TMTPro18x_K_F4 155.53 136.32 1664800 1275500 1509100 1623000 1818200 1883400 1714800 1764700 1823500 2033900 2246500 2173100 2259700 1825200 2043100 2451800 2286200 2340200 1537600 1170900 1551100 1613800 1860700 1882300 1739100 1818000 1869600 2044800 2285100 2189000 2294800 1927500 2097100 2446200 2185400 2223700 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 6673899999.999999 16828 293;3183 15952 31972;31973;31974;31975;31976;31977;31978;31979;31980;31981;31982;31983;31984 25608;25609;25610;25611;25612;25613;25614 25614 179;180 7 9606 Homo sapiens -0.062225551049778005 LMIEMDGTENK Unmodified 1279.5788 0.57882375 293;3183 A0A024R4F1;P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;A4UCS8;L0R849 ENO1;EDARADD Alpha-enolase;Enolase no no 0 0 0 3.5 0.5 2 2 56.024 56.046 2;3 4.5734E-31 16642 20230619_1883_Aki_TMTPro18x_K_F4 279.64 230.14 3639500 2999900 3660300 3575200 2936900 4068800 3611200 3673000 3864700 5084900 4599500 5238200 5495600 4600100 4830600 5636200 5429300 6025200 3365700 2751300 3706000 3570600 3132200 4066300 3612400 3816900 3959000 5065900 4728300 5286400 5548500 4822200 4961400 5666500 5193100 5716500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6053499999.999999 16829 293;3183 15952 31985;31986;31987;31988 25615;25616;25617 25616 3 9606 Homo sapiens -0.04978251242346232 LMITDAAR Oxidation (M) 905.46405 0.46405199 630 A0A024RAM4;P46821;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 1 0 5 0 1 42.726 42.808 2 0.015209 10650 20230619_1885_Aki_TMTPro18x_K_F5 89.046 64.847 91440 81405 89215 99419 119250 96716 91374 96223 114440 83278 90019 80635 80217 65064 99582 85377 91445 72574 84582 74657 91263 98890 120510 98099 94477 98003 114250 84823 93057 81507 83085 68698 100390 84810 87442 69136 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141020000 16830 630 15953 31989 25618 25618 370 1 9606 Homo sapiens 0.007538521286846844 LMITDAAR Unmodified 889.46914 0.46913736 630 A0A024RAM4;P46821;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 6.5 0.5 1 1 46.627 46.713 2 0.0016237 12085 20230619_1887_Aki_TMTPro18x_K_F7 139.68 93.016 267820 214340 255390 246360 238190 273070 260390 261580 313530 237600 271620 257330 222880 196060 267920 253540 304660 232460 247520 196540 260150 246620 249550 273850 262970 267400 314400 242120 278510 258370 231290 207210 273560 252760 290640 221280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308250000 16831 630 15953 31990;31991 25619 25619 1 9606 Homo sapiens 0.01998155991304884 LMITHIVNQNFK Unmodified 1456.7861 0.78605483 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 6 0 1 55.825 55.899 3 1.074E-13 16406 20230619_1886_Aki_TMTPro18x_K_F6 213.16 163.79 94619 73612 86433 83206 82643 104030 98898 98107 126900 61068 51031 43832 46445 37767 78717 56879 60253 43592 87402 67494 88427 83552 86742 103450 99586 99629 124460 63306 55749 45135 49099 40173 78330 56180 57713 41606 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72670000 16832 4593 15954 31992 25620 25620 1 9606 Homo sapiens 0.07593324088020381 LMIWDTR Oxidation (M) 949.46914 0.46913736 2910;3814 E9PC52;Q6FHQ0;Q16576;Q16576-2;A8K6A2;Q5JP01;Q5JP02;Q09028-3;Q09028-2;Q09028;Q09028-4;H0YF10;H0YCT5;H0YDK2 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 no no 0 1 0 1 0 1 53.454 53.454 2 0.024959 15750 20230619_1880_Aki_TMTPro18x_K_F1 94.006 62.717 67166 59490 70646 64903 65976 75069 74731 70447 86905 60761 57206 45729 57684 43610 63399 66698 58452 47422 62165 54502 71374 65276 69152 75046 75207 72032 86589 61527 60057 47113 59104 46285 64110 65570 55898 45286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60585000 16833 2910;3814 15955 31993 25621 25621 1733 1 9606 Homo sapiens -0.007618440086844203 LMIWDTR Unmodified 933.47422 0.47422274 2910;3814 E9PC52;Q6FHQ0;Q16576;Q16576-2;A8K6A2;Q5JP01;Q5JP02;Q09028-3;Q09028-2;Q09028;Q09028-4;H0YF10;H0YCT5;H0YDK2 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 no no 0 0 0 1.5 0.5 1 1 58.424 58.431 2 0.0066582 17851 20230619_1880_Aki_TMTPro18x_K_F1 131.3 91.755 358150 316250 342350 342710 262770 393300 347630 366080 410400 351970 280210 258670 322200 250700 350540 334760 317390 287980 331220 289720 348010 344750 282450 393060 347620 375370 409340 353770 295460 266660 328730 263450 354020 332500 303790 274120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 617060000 16834 2910;3814 15955 31994;31995 25622;25623 25622 2 9606 Homo sapiens 0.004824598539244107 LMLAVVK Unmodified 772.48808 0.48808189 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;A0A0S2Z377 ANXA6 Annexin A6;Annexin no no 0 0 0 4 0 1 59.282 59.284 3 0.012623 18043 20230619_1883_Aki_TMTPro18x_K_F4 82.263 43.044 92397 87381 84784 80242 103310 144810 110430 101690 128090 30678 32581 31098 34623 31626 57544 31978 33378 34379 85462 79923 87063 82508 106310 140490 111370 104950 125370 35053 38069 31641 36402 32620 56635 32351 32176 32625 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33207000 16835 1062;1064 15956 31996 25624 25624 1 9606 Homo sapiens 0.09273737353009892 LMMDPLSGQNR 2 Oxidation (M) 1292.5853 0.58530611 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PH35;A0A6Q8PEX7 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 0 2 0 5.5 0.5 1 1 42.109 42.198 2 0.0013199 10433 20230619_1885_Aki_TMTPro18x_K_F5 95.311 87.914 112020 85379 100500 110940 136680 110380 112170 114580 135830 117840 136070 123240 123800 105660 126260 133100 132460 125190 103450 78397 103590 109920 138190 111860 115270 116860 137010 119110 138980 124350 126860 111000 128720 132860 126630 119020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 188480000 16836 3254 15957 31997;31998 25625;25626;25627 25626 1922;1923 3 9606 Homo sapiens -0.049283132909522465 LMMDPLSGQNR Oxidation (M) 1276.5904 0.59039149 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PH35;A0A6Q8PEX7 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 0 1 0 6.5 0.5 1 1 48.679 48.762 2 0.00021308 13009 20230619_1887_Aki_TMTPro18x_K_F7 122.33 111.62 125090 108260 123390 125300 127070 139030 128170 122640 142320 136110 137770 130420 133790 114950 135560 142960 142680 148130 115690 99243 125540 125340 131730 139210 129640 126800 144030 136690 141370 132170 136770 120580 138250 143480 136490 140620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 125570000 16837 3254 15957 31999;32000 25628;25629 25629 1922;1923 2 9606 Homo sapiens -0.036840094283434155 LMMDPLSGQNR Unmodified 1260.5955 0.59547686 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PH35;A0A6Q8PEX7 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 7.5 0.5 1 1 54.528 54.593 2 2.1942E-12 15531 20230619_1888_Aki_TMTPro18x_K_F8 213.24 191.54 245150 190590 219480 230310 171050 249720 243240 229660 246710 254330 235780 241610 263640 215130 272730 266060 275770 266500 226410 174860 224520 229600 183940 250440 241200 236720 250790 255320 243790 244940 268570 225550 277290 266610 263760 253150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 361590000 16838 3254 15957 32001;32002 25630;25631 25631 2 9606 Homo sapiens -0.024397055657345845 LMMDPLTGLNR Oxidation (M) 1275.6315 0.63152802 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2V5Q6;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 1 0 4.5 3.5 1 1 57.258 57.284 2 0.00035779 16680 20230619_1888_Aki_TMTPro18x_K_F8 117.01 93.49 187420 156020 174920 178460 200870 207240 194460 206830 220760 203080 206100 181390 217340 162370 218140 243290 206010 213230 173220 143030 179110 178830 206360 207440 197310 211150 222850 204790 212520 184700 221340 172480 221280 241410 197280 202820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 297550000 16839 1680;2265 15958 32003;32004 25632;25633 25633 1098;1099 2 9606 Homo sapiens 0.004737516111163131 LMMDPLTGLNR Unmodified 1259.6366 0.6366134 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2V5Q6;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 1.5 0.5 1 1 61.764 61.769 2 1.652E-16 19194 20230619_1880_Aki_TMTPro18x_K_F1 220.39 169.33 570680 530440 581120 583000 480790 672780 589400 607740 704710 725680 721750 662530 726220 655280 696310 802060 777550 817420 528220 485910 588120 585840 511500 671830 591830 628380 712220 725280 739540 675560 739950 683920 713680 804170 743450 776080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 551900000 16840 1680;2265 15958 32005;32006 25634;25635 25634 2 9606 Homo sapiens 0.017180554737478815 LMMDPLTGLNR 2 Oxidation (M) 1291.6264 0.62644264 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2V5Q6;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 2 0 6.5 0.5 1 1 50.534 50.613 2 0.0043602 13827 20230619_1887_Aki_TMTPro18x_K_F7 83.168 72.016 82666 65387 79093 86072 103810 86571 92165 83256 91749 91107 108620 95234 98021 80802 99193 119840 104930 113430 76396 60039 81018 85218 105330 87502 93594 85539 94169 91777 110110 96126 100410 85891 101290 119370 100400 107770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 262750000 16841 1680;2265 15958 32007;32008 25636 25636 1098;1099 1 9606 Homo sapiens -0.007705522514697805 LMMLQHK Oxidation (M) 915.46703 0.46702887 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9;H0YHT2 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 1 0 3 0 1 43.689 43.759 3 0.052402 11250 20230619_1882_Aki_TMTPro18x_K_F3 55.604 28.079 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16842 4170 15959 32009 25637 25637 2686 1 9606 Homo sapiens 0.005914039818435413 LMNETTAVALAYGIYK Oxidation (M) 1772.9019 0.90187244 3544;1249 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;O14992;Q7KYN0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;E9PDE8;D6RJ96;B3KNM0 HSPA4;HEL-S-5a;HS24/p52;HS24/P52;HSPA4L Heat shock 70 kDa protein 4;Heat shock 70 kDa protein 4L no no 0 1 0 2 0 1 62.515 62.524 3 8.3364E-07 19757 20230619_1881_Aki_TMTPro18x_K_F2 119.45 106.31 42786 38033 54257 55010 75412 52983 49898 49605 57877 44213 44601 37961 49794 41311 50081 44529 47374 41750 39673 34944 54432 54118 75713 53725 52054 50784 57996 44820 46581 38968 50663 42683 50736 44566 45314 39704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50373000 16843 3544;1249 15960 32010 25638 25638 790 1 9606 Homo sapiens 0.04633758357522311 LMNETTAVALAYGIYK Unmodified 1756.907 0.90695782 3544;1249 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;O14992;Q7KYN0;Q53ZP9;A0A140VKE7;B4DZR0;O95757;E9PDE8;D6RJ96;B3KNM0 HSPA4;HEL-S-5a;HS24/p52;HS24/P52;HSPA4L Heat shock 70 kDa protein 4;Heat shock 70 kDa protein 4L no no 0 0 0 2.5 0.5 1 1 64.012 64.031 3 0.00017795 20146 20230619_1882_Aki_TMTPro18x_K_F3 90.725 68.571 118150 95512 121270 126390 104950 128840 110770 131260 133330 127280 117700 102740 118480 115280 118600 127970 121350 124030 109270 87698 122710 125130 110580 130100 112160 133760 133960 128130 121440 105910 121010 119130 120810 128160 116100 117830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134500000 16844 3544;1249 15960 32011;32012 25639 25639 1 9606 Homo sapiens 0.05878062220153879 LMPEIVATASK Unmodified 1158.6318 0.63184559 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 4.5 3.5 1 1 59.567 59.588 3 0.00027512 17634 20230619_1888_Aki_TMTPro18x_K_F8 104.79 89.163 67394 57772 67069 70796 61614 70776 74305 73819 81515 81462 84118 82340 90745 76819 85080 89964 87749 92946 62333 52992 68105 70439 64791 71639 74425 75415 82750 81944 86470 83382 92130 80130 86790 90351 83968 88230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46033000 16845 2863 15961 32013;32014 25640;25641 25641 2 9606 Homo sapiens 0.058874946025980535 LMPGQDPEK Oxidation (M) 1029.4801 0.48009598 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;H0Y827;Q96AY3-2 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 1 0 3 0 1 41.036 41.095 3 0.0029315 10126 20230619_1882_Aki_TMTPro18x_K_F3 78.816 62.242 36872 30995 37714 30054 45902 45338 44383 44508 59209 42363 58593 54636 49626 40848 55775 46030 58052 55945 34107 28373 38314 30670 46968 44695 45293 45451 59368 43329 59733 54462 51216 42877 56677 46760 55507 53039 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55456000 16846 167 15962 32015 25642 25642 106 1 9606 Homo sapiens -0.033464864250845494 LMPGQDPEK Unmodified 1013.4852 0.48518136 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;H0Y827;Q96AY3-2 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 0 0 4 0 1 45.955 45.998 3 0.015236 12155 20230619_1883_Aki_TMTPro18x_K_F4 61.56 42.466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16847 167 15962 32016 25643 25643 1 9606 Homo sapiens -0.02102182562452981 LMQGDEICLR Unmodified 1233.5846 0.58457783 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A8A5YP40;A0A994J773;A0A8A5YP91 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 4.5 0.5 1 1 52.667 52.715 2 0.00048388 15248 20230619_1883_Aki_TMTPro18x_K_F4 123.29 85.202 47870 43656 51813 47509 42169 53736 49894 51897 60183 54828 58827 61112 65639 53543 62228 59033 66214 63426 44326 39990 52141 47777 44831 53821 50206 53219 60662 55455 60740 61491 66599 55786 63536 59497 63295 60206 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91903000 16848 462 15963 32017;32018 25644 25644 1 9606 Homo sapiens -0.022871079400374583 LMQLMESEQK Unmodified 1235.589 0.5889945 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 0 5.5 0.5 1 1 59.843 59.9 3 0.00019769 18105 20230619_1886_Aki_TMTPro18x_K_F6 118.6 88.663 40584 38003 43764 44771 36794 47208 44700 43825 50396 53951 59176 57364 60139 44225 50216 60144 58016 63867 37585 34834 44102 44698 39028 47467 44810 45285 51376 54074 60320 57647 60828 46933 51726 60357 55475 60601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40372000 16849 380 15964 32019;32020 25645 25645 1 9606 Homo sapiens -0.01937643517135257 LMQLQHEK Oxidation (M) 1041.5277 0.52771487 41 Q05CP8;A0A024QZJ7;Q16204 CCDC6 Coiled-coil domain-containing protein 6 yes no 0 1 0 7 0 1 38.79 38.854 3 0.0069844 8824 20230619_1887_Aki_TMTPro18x_K_F7 78.149 55.409 28533 19515 27728 29476 33107 36226 31867 36807 43936 23974 30624 27303 28721 24636 28706 26076 32477 28434 26351 17958 28325 29027 33950 36115 32577 37201 43470 25053 31940 27504 29384 25578 29382 26325 31010 26996 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26644000 16850 41 15965 32021 25646 25646 14 1 9606 Homo sapiens 0.00861212565769165 LMQLVDHR Oxidation (M) 1026.528 0.52804923 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 1 0 6.8 0.748 2 2 1 40.946 41.01 3 0.00056687 9557 20230619_1887_Aki_TMTPro18x_K_F7 123.98 89.582 77675 58653 71798 79769 83680 93006 81058 82329 109840 80371 94027 92196 88929 79416 89012 92456 95734 97037 71745 53885 73648 78967 85979 92780 82763 84799 109530 81762 96980 92658 90966 83012 90903 92952 91542 92113 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 387610000 16851 1328 15966 32022;32023;32024;32025;32026 25647;25648 25648 839 2 9606 Homo sapiens 0.015846322856077677 LMQLVDHR Unmodified 1010.5331 0.5331346 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 8 0 1 47.558 47.616 3 1.0023999999999999E-21 12515 20230619_1888_Aki_TMTPro18x_K_F8 228.39 188.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16852 1328 15966 32027 25649 25649 1 9606 Homo sapiens 0.02828936148239336 LMQVVPQET Unmodified 1043.5321 0.53213155 3781 Q01650;A0A0C4DGL4;Q96QB2 SLC7A5;lat1 Large neutral amino acids transporter small subunit 1 yes no 0 0 0 5 0 1 58.346 58.403 2 0.0088409 17230 20230619_1885_Aki_TMTPro18x_K_F5 87.251 80.021 32738 31681 35029 30548 26793 33495 32266 31932 38274 36613 34412 36214 40163 35901 41047 41136 41165 47793 30324 28986 35244 31017 28661 33624 32418 32855 38507 36750 35764 36770 40864 37328 41732 41625 39431 45299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20613000 16853 3781 15967 32028 25650 25650 1 9606 Homo sapiens 0.012106769886713664 LMSAISK Unmodified 748.41531 0.41531088 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 3 0 1 51.769 51.835 2 0.0050551 14948 20230619_1882_Aki_TMTPro18x_K_F3 143.85 43.787 599490 493040 532070 479290 468970 548060 527140 499950 645110 486990 519590 379250 469130 364490 530020 554970 571570 380420 553830 451380 544820 486550 494270 548120 531840 513750 644930 490000 535990 390230 483210 386520 540260 544840 545150 363870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363290000 16854 3606 15968 32029 25651 25651 1 9606 Homo sapiens 0.031039835595947807 LMSENTEGSAQAPQLPR Oxidation (M) 1843.8734 0.87342586 1728 B2R928;A0A804HIS2;Q9Y4K4;D3DSB5;G3V4T8;B3KWC4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 5 yes no 0 1 0 4 0 1 44.663 44.707 3 1.7109E-05 11605 20230619_1883_Aki_TMTPro18x_K_F4 95.9 83.274 26403 22076 24052 25435 27454 37644 32297 25146 32917 29254 36295 34690 39812 29558 34779 37545 39662 41124 24399 20239 24702 25562 28435 36837 32284 26682 33614 29532 37223 34817 40254 31104 35739 37791 37911 39016 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24097000 16855 1728 15969 32030 25652 25652 1132 1 9606 Homo sapiens -0.01475591289681688 LMSTVDPK Unmodified 889.4579 0.45790397 3797 Q5T760;Q05519-2;Q05519;Q05BU6;Q6PJY9;Q6PKC9;Q6PJB9;Q6MZM2;Q6N079;Q5T757 SRSF11;SFRS11;DKFZp686D02116;DKFZp686P22142 Serine/arginine-rich splicing factor 11 yes no 0 0 0 7 0 1 49.351 49.435 3 0.010637 13346 20230619_1887_Aki_TMTPro18x_K_F7 73.248 31.264 74275 67108 72488 72434 70410 84779 79735 80203 100630 91268 78192 75322 91798 70762 68408 96915 113850 89106 68711 61471 73763 72910 73641 84695 80497 82525 100470 91192 81829 77058 92165 74570 72625 96443 108320 84807 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58173000 16856 3797 15970 32031 25653 25653 1 9606 Homo sapiens 0.008753338971587254 LMTDTINEPILLCR Unmodified 1687.8637 0.8637128 3265 O43776;B4DN60 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 0 7 0 1 62.089 62.125 3 1.2177E-12 18797 20230619_1887_Aki_TMTPro18x_K_F7 159.08 136.2 104290 85614 109290 103530 105110 102860 92861 101620 117680 112940 113060 113600 114490 106130 133670 129210 135260 146170 96474 78532 110460 103120 109110 104090 95197 104190 118340 113570 116340 115070 117790 110940 135650 130430 129470 138610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90419000 16857 3265 15971 32032 25654 25654 1 9606 Homo sapiens 0.047295491712247895 LMTEILGR Unmodified 931.51609 0.51608756 416 B2R6U8;A0A024R6W2;O43809;H3BND3;H3BV41 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 0 1 0 1 59.657 59.657 2 0.0095452 18329 20230619_1880_Aki_TMTPro18x_K_F1 101.41 59.91 222030 196080 224670 236160 208230 274020 252200 243660 248140 285980 265180 242150 275720 214340 280170 254010 237400 262590 205420 179810 227900 235700 219040 273430 251670 252140 253930 285350 271670 246860 281050 224280 282320 255200 227730 249230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149440000 16858 416 15972 32033 25655 25655 1 9606 Homo sapiens 0.04759015542447287 LMTGDTYTAHAGAK Unmodified 1435.6766 0.67656396 3582 P42684-5;P42684;P42684-3;P42684-6;P42684-2;P42684-10;P42684-7;P42684-4;A0A023PX70;A9UF02;A9UEZ6;Q59FK4;A0A024R8E2;C0LYZ4;A9UF07;Q13914;K4L955;K4LBP8;Q59F19;P42684-8;P00519;P00519-2;F1JU33 ABL2;BCR/ABL fusion;ABL1 Abelson tyrosine-protein kinase 2;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase ABL1 yes no 0 0 0 8 0 1 43.18 43.19 3 0.069648 10762 20230619_1888_Aki_TMTPro18x_K_F8 49.356 26.616 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16859 3582 15973 32034 25656 25656 1 9606 Homo sapiens -0.023847263219749948 LMTHLDTDVKR Unmodified 1327.6918 0.69182009 4567 Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3;H0YEN0 RIC8A Synembryn-A yes no 0 0 1 8 0 1 43.319 43.329 4 0.00040129 10832 20230619_1888_Aki_TMTPro18x_K_F8 92.247 70.874 115420 91905 111440 115570 105060 141920 123530 121730 144790 150260 135550 132310 163470 124610 118770 136970 141080 128510 106670 84346 113500 115100 110370 140970 124150 126490 146040 149810 140660 134830 163740 129520 122880 136940 134680 122190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46232000 16860 4567 15974 32035 25657 25657 1 9606 Homo sapiens 0.041081852658408025 LMTQAQLEEATR Unmodified 1389.6922 0.69221402 1684 Q8NBL6;G5E9W7;H7C5L9;A0A8I5KYF1;A0A8I5KSY5;A0A7P0MKV3;P82650;A0A8I5KQR7;H7C5F2;H7C5H3;A8K9Y7;P82650-2 MRPS22 28S ribosomal protein S22, mitochondrial yes no 0 0 0 4.5 0.5 1 1 50.263 50.316 2 2.342E-05 13905 20230619_1885_Aki_TMTPro18x_K_F5 165.78 144.27 109690 90261 102570 122410 119020 145960 131520 126280 139440 169970 182320 187910 221630 167510 138520 214140 211000 237350 101380 82893 105180 121220 122780 145300 132140 131550 143470 169950 186700 189290 220900 176070 146740 215480 201360 225100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92705000 16861 1684 15975 32036;32037 25658 25658 1 9606 Homo sapiens 0.012955601950579876 LMTTGNNTVR Unmodified 1105.555 0.55499226 2523 B4DL66;Q9H832;D3DTW2;Q9H832-2;I3L4C5 UBE2Z Ubiquitin-conjugating enzyme E2 Z yes no 0 0 0 1 0 1 39.331 39.331 2 0.001061 9801 20230619_1880_Aki_TMTPro18x_K_F1 124.81 105.29 48463 37961 43272 47164 52317 62665 53319 54020 63953 46464 55435 54114 56498 40355 48827 55074 64220 53872 44761 34837 44557 47068 53719 61972 54023 55576 64148 47626 57306 54153 57233 42886 50664 55021 61225 51218 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21747000 16862 2523 15976 32038 25659 25659 1 9606 Homo sapiens 0.006436961061581314 LMTTGNNTVR Oxidation (M) 1121.5499 0.54990688 2523 B4DL66;Q9H832;D3DTW2;Q9H832-2;I3L4C5 UBE2Z Ubiquitin-conjugating enzyme E2 Z yes no 0 1 0 7 0.816 1 1 1 34.003 34.044 2 0.0015523 7075 20230619_1888_Aki_TMTPro18x_K_F8 97.965 80.453 27965 18079 26236 26948 35946 31211 28877 31014 37148 25359 38548 38569 36788 32952 34645 35232 44804 39722 25811 16638 26931 26535 36331 31243 29790 31547 37380 26354 39404 38388 37521 34284 35828 35622 42735 37699 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31396000 16863 2523 15976 32039;32040;32041 25660;25661 25661 1539 2 9606 Homo sapiens -0.006006077564506995 LMVALAK Oxidation (M) 760.4517 0.45169638 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;A6NMY6;H0YMU9;H0YL33;H0YM50;B3KRQ1;H0YNB8;H0YKS4;H0YN28;H0YNP5;H0YNA0 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 1 0 2.5 0.5 2 2 51.177 51.235 2;3 0.012763 15034 20230619_1881_Aki_TMTPro18x_K_F2 82.263 57.927 713500 545060 565670 545820 936820 932030 763710 752410 986290 332920 394810 301600 316020 272340 498150 346150 411600 323950 658350 499270 592270 556470 939030 909400 786220 769540 966570 359420 429190 307420 333970 285790 497700 345930 394040 308240 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 831130000 16864 368 15977 32042;32043;32044;32045 25662;25663;25664 25662 216 3 9606 Homo sapiens 0.06188860456290968 LMVALAK Unmodified 744.45678 0.45678176 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;A6NMY6;H0YMU9;H0YL33;H0YM50;B3KRQ1;H0YNB8;H0YKS4;H0YN28;H0YNP5;H0YNA0 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 3.5 0.5 1 1 57.053 57.072 2 0.0054462 17133 20230619_1883_Aki_TMTPro18x_K_F4 140.79 91.444 1705000 1351300 1402600 1381000 1874500 2416800 1772100 1768500 2327500 718890 693240 522390 565970 475040 1232600 721240 791280 500220 1573900 1237800 1457400 1406100 1911600 2349500 1808300 1822700 2269500 780530 782820 539410 613870 504460 1214300 710160 759340 478520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1190000000 16865 368 15977 32046;32047 25665;25666 25666 2 9606 Homo sapiens 0.07433164318899799 LMVEPLQAILIR Unmodified 1394.8319 0.83194239 964 Q13617-2;Q13617;A0A0A0MTN0;A0A8I5QJI3;A0A8I5KYP8;A0A140VKB1;A0A8I5KUA9;A0A8I5KQQ5;Q5T2B5;A0A8I5KU22;A0A0D9SET6;A0A8I5KYZ8;A0A8I5KXB2;A0A8I5KPX0;A0A8I5KS98;A0A8I5KTY5;A0A8I5KVE2;A0A8I5QKN3;A0A8I5KY75 CUL2 Cullin-2 yes no 0 0 0 4 0 1 64.619 64.629 2 0.062167 20281 20230619_1883_Aki_TMTPro18x_K_F4 72.922 49.365 21626 16985 19690 17401 15634 22505 18878 18461 23208 25349 24080 29478 30106 27245 24800 33855 30621 33175 19977 15560 20092 17619 16701 22273 18989 19322 23452 25379 24963 29653 30301 28515 25684 33850 29259 31507 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14321000 16866 964 15978 32048 25667 25667 1 9606 Homo sapiens 0.15031969270216905 LMVSMLDR Unmodified 963.48816 0.48815825 2734 C9J0K6;P30626-2;P30626;P30626-3;B4DHQ6 SRI Sorcin yes no 0 0 0 4.5 3.5 1 1 57.327 57.353 2 0.0011869 17414 20230619_1880_Aki_TMTPro18x_K_F1 147.04 116.43 216100 159300 194680 204470 168080 284150 215860 216360 273700 207190 174880 179320 196120 179240 216330 216340 222270 213890 199540 146280 199330 203750 178910 279430 216630 225420 271480 209270 185120 183330 200610 186830 219950 216680 212550 203210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135830000 16867 2734 15979 32049;32050 25668;25669 25668 2 9606 Homo sapiens 0.004953692906951801 LMYGQEDVPK Oxidation (M) 1194.5591 0.55907458 812 A0A0G2JMS5;A0A087WU62;A0A087X2D5;B4DEF8;Q9BRJ2 MRPL45 39S ribosomal protein L45, mitochondrial yes no 0 1 0 4 0 1 47.471 47.513 3 0.012417 12842 20230619_1883_Aki_TMTPro18x_K_F4 63.694 39.843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16868 812 15980 32051 25670 25670 481 1 9606 Homo sapiens -0.030422591908063623 LNAEHDGAFYFK Unmodified 1410.6568 0.65681479 2773 CON__P01044-1;CON__Q2KJ62 yes no 0 0 0 6 0 1 51.483 51.56 3 8.5294E-06 14587 20230619_1886_Aki_TMTPro18x_K_F6 136.93 113.7 + 73198 74531 83590 97228 137410 202000 131910 125000 242640 84170 133950 192820 111520 119440 138020 202360 316280 477940 67867 68369 85038 97574 138910 194350 136530 131940 235940 90934 141970 188390 116310 130320 150120 217000 302010 450430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63921000 16869 2773 15981 32052 25671 25671 1 -0.032087342704471666 LNAILFK Unmodified 817.50617 0.5061748 1901 A0RZB8;Q6URC4;O60610-2;O60610-3;O60610;A0A1E1ERW3;A0A2R8Y5N1;Q7KZJ7;Q96IL1;B4DVR3 DIAPH1 Protein diaphanous homolog 1 yes no 0 0 0 4.5 0.5 1 1 61.62 61.646 2 0.051913 18997 20230619_1883_Aki_TMTPro18x_K_F4 85.359 24.398 130590 117240 127990 126680 122880 140640 141630 133730 159980 113330 106440 85592 98543 77904 134120 104270 105220 90592 120810 107390 130160 127410 128590 141030 142260 136560 159670 114880 111330 87982 102470 82046 133990 103690 100850 86244 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79305000 16870 1901 15982 32053;32054 25672;25673 25672 2 9606 Homo sapiens 0.09012195599370898 LNAIYQNNLTK Unmodified 1290.6932 0.6932003 3371 V9HW90;P00390-2;P00390-3;P00390;P00390-5;P00390-4;A0A2R8YF59;H0YC68 HEL-75;GSR Glutathione reductase, mitochondrial yes no 0 0 0 3 0 1 53.975 54.027 2 1.4832E-05 15964 20230619_1882_Aki_TMTPro18x_K_F3 167.12 126.39 48938 41366 46358 52613 48112 63328 54119 56010 59615 70322 68309 61503 71930 55521 52967 80139 71906 71388 45241 37960 47386 52335 50085 63027 54406 58088 60827 70019 69763 62679 72371 58795 55391 79559 68613 67899 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185350000 16871 3371 15983 32055 25674 25674 1 9606 Homo sapiens 0.05948142626266417 LNDFASTVR Unmodified 1021.5193 0.51925868 3068 H3BNX8;P20674;H3BRM5;H3BV69 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes no 0 0 0 6.5 0.5 1 1 48.314 48.396 2 0.011035 12832 20230619_1887_Aki_TMTPro18x_K_F7 83.278 59.421 346900 1048000 455410 433620 418530 701160 535530 482420 547750 404870 479710 450800 442610 378110 660790 433920 534210 474180 326990 952470 453320 493820 442280 685040 533460 505910 553930 415180 494110 453320 463220 395420 659810 438160 511940 450170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 483600000 16872 3068 15984 32056;32057 25675 25675 1 9606 Homo sapiens 0.009359819208043518 LNDLIQR Unmodified 870.49232 0.49231565 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 7 0 1 49.034 49.118 2 0.024753 13186 20230619_1887_Aki_TMTPro18x_K_F7 89.046 40.931 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16873 3647 15985 32058 25676 25676 1 9606 Homo sapiens 0.051889181002820806 LNDRYPK Unmodified 904.47667 0.47666558 3493 P23258;A0A1B4Z394;A0A7P0T9G6;Q9NRH3;K7EIS0 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain;Tubulin gamma chain yes no 0 0 1 8 0 1 37.408 37.394 3 0.031277 8435 20230619_1888_Aki_TMTPro18x_K_F8 69.423 46.683 125310 87977 123350 119060 142770 125030 136900 128820 163880 151790 174020 157330 164780 144830 158770 126600 191660 160060 115750 80845 125680 117780 146370 126140 139210 131980 165790 152380 177550 159010 168230 148880 163170 129520 182840 151780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52141000 16874 3493 15986 32059 25677 25677 1 9606 Homo sapiens 0.02060631583231043 LNDVTDVQILAR Unmodified 1355.7409 0.74087877 592 A0A024R9T6;Q9P270;D6RIF6 hCG_17415;SLAIN2 SLAIN motif-containing protein 2 yes no 0 0 0 6 0 1 57.657 57.726 2 0.018731 17167 20230619_1886_Aki_TMTPro18x_K_F6 80.318 43.617 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16875 592 15987 32060 25678 25678 1 9606 Homo sapiens 0.07723796826485341 LNDYLQIETIQALEELAAK Unmodified 2174.1471 0.14706475 1260 A0A1B0GVH5;A0A1B0GTC3;B3KU60;Q9C0B1;A0A1B0GUC3;A0A1B0GU26;A0A1B0GTC5;A0A1B0GV98;A0A1B0GTY1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes no 0 0 0 7 0 1 67.556 67.577 3 5.0352E-05 21152 20230619_1887_Aki_TMTPro18x_K_F7 89.049 78.195 5060.1 2731.4 3852.9 4452.1 4975.2 3247.5 3776 3909.9 4577.2 4997.5 6365.3 5774.6 5946.5 3511.8 7079.8 6938.1 5432 5018.9 4659.8 2518.9 4030.6 4337.1 5033.7 3395.3 3904.7 3979.9 4690.3 5012.3 6426.6 5756.8 6122.7 3881.1 7087.7 6810 5210.3 4788.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8822100 16876 1260 15988 32061 25679 25679 1 9606 Homo sapiens 0.10695710301433792 LNEAQPSTIATSMR Oxidation (M) 1533.7457 0.74570615 3667 P56537;P56537-2;A0A0U1RQV5 EIF6 Eukaryotic translation initiation factor 6 yes no 0 1 0 6.5 0.5 1 1 41.796 41.879 3 0.00098197 10288 20230619_1886_Aki_TMTPro18x_K_F6 76.211 61.791 47105 43464 64107 61882 76826 74183 71061 68680 76304 61429 71129 69579 68214 57684 70342 64501 81346 69242 43722 39922 63876 61131 78502 73963 72151 70357 77192 62742 73101 69876 69826 60259 72058 64999 77641 65761 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 356610000 16877 3667 15989 32062;32063 25680 25680 2368 1 9606 Homo sapiens 0.00018312906900064263 LNEAQPSTIATSMR Unmodified 1517.7508 0.75079153 3667 P56537;P56537-2;A0A0U1RQV5 EIF6 Eukaryotic translation initiation factor 6 yes no 0 0 0 6.5 0.5 1 1 47.432 47.517 2 2.5678E-22 12415 20230619_1887_Aki_TMTPro18x_K_F7 239.48 202.13 76717 65757 66586 67659 61955 73135 80602 76340 85156 85855 89422 74221 96541 75704 83028 98292 95426 94778 70881 60219 68434 68294 65273 73634 80327 78019 86670 85909 91751 76017 97625 79280 85434 98166 91179 90060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 274770000 16878 3667 15989 32064;32065 25681;25682 25682 2 9606 Homo sapiens 0.012626167695316326 LNEEIER Unmodified 901.45051 0.45051041 405 H0YLY0;A0A024R6N2;Q9Y5S2 CDC42BPB Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK beta yes no 0 0 0 1 0 1 38.996 38.996 2 0.02166 9641 20230619_1880_Aki_TMTPro18x_K_F1 102.95 0 101930 62482 103040 102460 115680 116780 111200 115100 131530 127670 158670 165110 144950 130890 129460 98034 178550 153330 94115 57587 104750 100340 118970 116930 113060 118040 133880 129480 160940 164610 147710 134430 134430 102270 170190 145140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93432000 16879 405 15990 32066 25683 25683 1 9606 Homo sapiens -0.0041568237888895965 LNEHFLNTTDFLDTIK Unmodified 1919.9629 0.9628928 3600 Q53GL5;P48735;P48735-2;Q13584;B4DSZ6;H0YL11 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] yes no 0 0 0 8 0 1 62.387 62.413 3 1.5311E-14 18807 20230619_1888_Aki_TMTPro18x_K_F8 178.34 159.02 395270 308230 352120 431590 394770 497870 440580 465450 490670 511120 528760 547380 588870 537730 548730 617680 545780 678790 365060 283220 362520 426350 408530 497380 443190 478880 498750 515240 543530 553840 597380 559170 558960 622640 523150 643580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1845299999.9999998 16880 3600 15991 32067 25684 25684 1 9606 Homo sapiens 0.03970986661306597 LNEILQAR Unmodified 955.54508 0.5450795 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 8 0 1 52.681 52.756 2 0.007339 14735 20230619_1888_Aki_TMTPro18x_K_F8 99.442 28.752 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16881 12 15992 32068 25685 25685 1 9606 Homo sapiens 0.0655287616308442 LNEIVGNEDTVSR Unmodified 1444.7158 0.71578623 2664 Q75MT5;B5BUD2;P35250-2;P35250;H7C5S7;H7C5P1;H7C5Q7;F8WC37;H7C5A0;H7C5G4 RFC2 Replication factor C subunit 2 yes no 0 0 0 2 0 1 49.843 49.902 2 1.8104E-35 14396 20230619_1881_Aki_TMTPro18x_K_F2 241.35 202.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16882 2664 15993 32069 25686 25686 1 9606 Homo sapiens 0.011216972332249497 LNEIWHR Unmodified 966.50355 0.50354903 1857 A0A8V8TR54;Q12873;Q12873-3;Q12873-2;B4DLC6;B4DKV1;B3KWV4;Q2TAZ1;I3L229;H7C3H7;H7C0J3 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 0 0 0 8 0 1 45.929 45.967 3 0.0021889 11874 20230619_1888_Aki_TMTPro18x_K_F8 116.88 79.863 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16883 1857 15994 32070 25687 25687 1 9606 Homo sapiens 0.0189574019441352 LNELLVK Unmodified 827.51165 0.5116541 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q5CAQ4;I3L0K7;I3L253 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 1 0 1 57.924 57.924 2 0.081642 17608 20230619_1880_Aki_TMTPro18x_K_F1 72.485 16.768 130700 120850 142280 141680 125790 118540 130650 157620 141390 162110 166180 147750 133390 131380 144410 168910 173060 160180 121040 110770 143280 141170 131900 122610 131960 158370 144500 163040 167800 150190 137850 137970 148370 168580 165210 152280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 899120000 16884 1211 15995 32071 25688 25688 1 9606 Homo sapiens 0.09099874391188223 LNENHSGELWK Unmodified 1325.6364 0.6364137 963 V9HWF0;A0A0A0MTH3;Q13418;Q13418-3 HEL-S-28;ILK Integrin-linked protein kinase yes no 0 0 0 6 0 1 45.593 45.679 3 0.014491 11975 20230619_1886_Aki_TMTPro18x_K_F6 52.495 43.063 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16885 963 15996 32072 25689 25689 1 9606 Homo sapiens -0.013379049302329804 LNENLRR Unmodified 913.50936 0.50936269 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 1 7.5 0.5 1 1 31.657 31.709 3 0.025295 6232 20230619_1888_Aki_TMTPro18x_K_F8 73.931 11.358 73871 56346 81818 82363 109410 85078 84387 94805 88171 87944 113950 110490 98136 82095 96741 63694 126520 97868 68338 51806 82814 81072 110480 86117 86729 95979 90637 89882 114990 110120 100590 84692 99837 66338 120570 92699 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61964000 16886 4191 15997 32073;32074 25690 25690 1 9606 Homo sapiens 0.049148387060995447 LNEQASEEILK Unmodified 1272.6561 0.65614609 1789 A0A8J8YYJ1;Q01105-3;A0A8I5KS71;B2RCX0;A0A024R895;Q5VXV3;A0A0C4DFV9;Q01105-4;Q01105-2;Q01105 SET Protein SET yes no 0 0 0 3.5 1.12 1 1 1 1 52.084 52.135 3 2.0693E-05 15037 20230619_1882_Aki_TMTPro18x_K_F3 140.24 94.271 296350 178350 247720 279570 257330 306040 274480 281740 417840 348120 403460 438440 473790 398990 324860 440740 454150 496000 273200 164300 256040 274190 267570 306730 280190 291320 416760 351260 417690 439640 474330 415130 340730 444980 433560 470360 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 682770000 16887 1789 15998 32075;32076;32077;32078 25691;25692;25693 25692 3 9606 Homo sapiens 0.030724262898502275 LNEQEGVPSVFNPPPSRPLQVNTADHR Unmodified 2997.5057 0.50568088 4333 Q96CS3;B4E2M8 FAF2 FAS-associated factor 2 yes no 0 0 1 7 0 1 50.653 50.734 4 1.6931E-13 13978 20230619_1887_Aki_TMTPro18x_K_F7 131.57 116.25 22360 17654 17029 22324 23713 25770 28275 24413 25527 23965 25784 24221 29077 21052 22375 24111 26844 24963 20630 16203 17881 22198 24220 25765 28139 25032 26170 24253 26573 24476 29229 22001 23125 24225 25628 23708 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 395700000 16888 4333 15999 32079 25694 25694 1 9606 Homo sapiens 0.08682827139273286 LNEQHQLILSK Unmodified 1321.7354 0.73539946 2022 B2RDK5;A8K333;Q8IYB5-3;Q8IYB5-2;Q8IYB5;B4E0I1 SMAP1 Stromal membrane-associated protein 1 yes no 0 0 0 8 0 1 46.683 46.732 3 0.00019355 12165 20230619_1888_Aki_TMTPro18x_K_F8 111.79 81.984 83878 66865 77045 81785 89058 90844 93282 86084 101870 101100 107290 110170 118860 92126 96243 118160 127900 120700 77495 61348 79038 81492 91623 91094 94064 88698 103540 101650 110340 110830 119830 97044 100130 118390 122020 114640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 258240000 16889 2022 16000 32080 25695 25695 1 9606 Homo sapiens 0.08740118034666011 LNEQQSVLQR Unmodified 1213.6415 0.64149908 1432 G8JLG1;A0A384MR33;Q14683;A0A6Q8PHC3;V9GY57 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 5.5 0.5 1 1 41.365 41.455 2 7.7017E-10 10148 20230619_1885_Aki_TMTPro18x_K_F5 212.21 161.14 259510 208380 224450 235940 272520 272460 269350 254420 305920 301870 336320 307100 344760 270890 270800 335160 366460 307900 239660 191040 231680 236550 279070 272470 272880 262450 310830 302730 343700 310450 348000 284080 282280 334080 349300 292950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 240230000 16890 1432 16001 32081;32082 25696;25697 25696 2 9606 Homo sapiens 0.0432239893239057 LNEQSPTR Unmodified 943.47231 0.47230849 3304 O75396;I1VE16 SEC22B Vesicle-trafficking protein SEC22b yes no 0 0 0 3.5 0.5 1 1 32.291 32.361 2 0.0061291 6498 20230619_1882_Aki_TMTPro18x_K_F3 101.72 75.782 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16891 3304 16002 32083;32084 25698;25699 25698 2 9606 Homo sapiens -0.0016887763032400471 LNESTFDTQITK Unmodified 1395.6882 0.6881745 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5.67 0.471 1 2 53.395 53.471 2;3 1.9068E-17 15260 20230619_1885_Aki_TMTPro18x_K_F5 259.47 193.18 429670 315970 417950 442000 384460 446170 463110 425590 487410 562490 547680 552840 598500 512840 505460 629740 596040 622100 396970 290410 425230 435980 404240 450270 463210 440020 498000 560760 561310 560330 604870 536520 521320 630160 569590 590860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 504410000 16892 3758 16003 32085;32086;32087 25700;25701 25700 2 9606 Homo sapiens 0.006157939729973805 LNFAVASR Unmodified 876.48175 0.48175096 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DJ98;A0A8I5KYJ6;A0A8I5KXE2;B4DDM1;A0A8I5KTA1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 3 0.816 1 1 1 48.416 48.477 2 0.016109 13452 20230619_1882_Aki_TMTPro18x_K_F3 92.491 61.879 1363100 936560 1016000 1121400 1240800 1318900 1396100 1314400 1772300 1068400 1036300 1050500 1129500 910040 1123900 1174400 1199300 1009300 1256500 859630 1065000 1120000 1276300 1318700 1409100 1336600 1752800 1093800 1102300 1062900 1149700 957330 1147300 1166700 1145500 961060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1457200000 16893 2389 16004 32088;32089;32090 25702;25703 25702 2 9606 Homo sapiens 0.038569354458559246 LNFHPDQEDQFFSLVHEK Unmodified 2229.0491 0.049082043 2345 B3KM73;D3DVL7;B4DU42;Q969Z0-2;Q969Z0;B3KRS4;B3KMT3;H7C4R5 TBRG4 Protein TBRG4 yes no 0 0 0 5 0.816 1 1 1 59.796 59.835 4 3.463E-09 17816 20230619_1885_Aki_TMTPro18x_K_F5 122.57 105.88 70326 61771 68552 83285 62326 81814 73936 80362 99316 80523 68313 76041 78820 65644 86217 80299 78177 88164 65045 56712 69796 82289 65693 82760 74663 82202 98485 81270 72090 77013 80461 68861 87066 80916 74946 83618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189140000 16894 2345 16005 32091;32092;32093 25704 25704 1 9606 Homo sapiens -0.01628053503964111 LNFSHGTHEYHAETIK Unmodified 1882.8962 0.89621022 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;A0A024R609;H3BQ34;H3BUW1;H3BTJ2;H3BT25;V9HWB8;P14618;A0A8V8TNX9 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 7 0.816 1 1 1 39.633 39.681 5 3.8549E-11 9074 20230619_1887_Aki_TMTPro18x_K_F7 159.81 122.72 177320 144140 169270 180400 228590 238510 311870 338830 115020 171650 152290 205440 178660 122070 219840 180780 240150 298670 163890 132260 173690 180100 234310 238990 303560 334510 130110 182940 156310 204140 183290 132100 223730 187360 229990 282210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1393600000 16895 370;3451 16006 32094;32095;32096 25705;25706 25706 2 9606 Homo sapiens -0.009922041099343915 LNFSTPTSTNIVSVCR Unmodified 1794.8934 0.89343302 2124 A8K9T9;A8K8N7;O15067;J3QSG0;J3QSH6 PFAS Phosphoribosylformylglycinamidine synthase yes no 0 0 0 4 0 1 56.805 56.811 3 2.3172E-06 16975 20230619_1883_Aki_TMTPro18x_K_F4 117.18 93.695 119650 99358 123540 119660 134030 157460 125470 133700 160720 147450 153550 144530 151250 140030 155160 167440 174890 166280 110670 91131 125310 119690 138290 155790 128150 138540 161450 148260 157740 146780 154740 146000 158860 167720 167080 157980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 361430000 16896 2124 16007 32097 25707 25707 1 9606 Homo sapiens 0.02778204440915033 LNGTDPEDVIR Unmodified 1227.6095 0.60953025 3147 Q53HL1;J3QRS3;P19105;O14950;Q2F834;Q71U02;Q6IBG1;A0A384NY64;P24844;J3KTJ1 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 0 0 2.5 0.5 1 1 48.504 48.576 2 0.00032281 13784 20230619_1881_Aki_TMTPro18x_K_F2 140.49 118.25 79192 61301 84042 80032 94725 101290 98194 102320 113370 121350 108310 115330 131460 100760 115070 120290 126080 131250 73239 56287 85109 79579 97610 100840 99288 104910 114550 121420 112430 116810 132580 105530 117930 121160 120560 124520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166570000 16897 3147 16008 32098;32099 25708 25708 1 9606 Homo sapiens 0.004829864585417454 LNHANVVR Unmodified 921.51445 0.51444807 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-3;Q9NSQ6;H0Y8F1;B3KP36;C9JQR6 PTK7;DKFZp434L0319 Inactive tyrosine-protein kinase 7 yes no 0 0 0 4.5 3.04 1 1 1 1 30.104 30.152 3 0.0001425 5712 20230619_1888_Aki_TMTPro18x_K_F8 162.5 131.13 87896 29552 76733 78408 113160 106520 105650 104950 135920 79100 104450 102330 87245 87036 110480 60417 114750 81184 80891 27572 79422 75449 114380 105480 107840 106620 135280 82141 107920 102270 90798 88829 111870 62497 109520 77012 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 89821000 16898 3847 16009 32100;32101;32102;32103 25709;25710 25710 2 9606 Homo sapiens 0.0505514256871038 LNHIFRPQIER Unmodified 1421.7892 0.78916637 3096 H7C5I4;Q96IK1 BOD1 Biorientation of chromosomes in cell division protein 1 yes no 0 0 1 4 0 1 42.245 42.289 4 9.8622E-05 10523 20230619_1883_Aki_TMTPro18x_K_F4 134.13 99.438 47522 23764 43050 43975 38416 43677 40887 46027 52162 34954 38446 34023 34958 29253 39516 45395 40109 24619 43801 21965 44034 42722 40378 44203 41453 46556 51893 35915 39918 34477 36013 31151 40163 44186 38263 23660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31372000 16899 3096 16010 32104 25711 25711 1 9606 Homo sapiens 0.09514335257017592 LNHLCGADFVK Unmodified 1272.6285 0.62849155 1553 O95394-4;J3KN95;H0Y987;A0A8V8TMH7;B3KN28;A0A8V8TLT8;A0A494C1Q4;A0A8V8TNH4;A0A494C1E2;A0A8V8TMI1;O95394;O95394-3;A0A087WT27;A0A494C0G1;A0A494C099;H0Y8I3;A0A494C163 PGM3 Phosphoacetylglucosamine mutase yes no 0 0 0 4.5 3.5 1 1 49.374 49.41 3 1.7092E-06 13264 20230619_1888_Aki_TMTPro18x_K_F8 156.36 100.91 175480 89409 146320 177370 177070 185600 203690 195100 228500 190340 184480 191140 210540 173610 189290 235210 196600 211600 161660 82718 151730 171830 182210 187130 204500 198560 229570 192700 192550 193500 213030 182910 193530 233910 188140 201180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 313970000 16900 1553 16011 32105;32106 25712;25713 25713 2 9606 Homo sapiens 0.003082445486143115 LNHLVDSLQQLR Unmodified 1434.7943 0.79431133 511 A0A8Q3SHZ4;A0A494C1F2;A0A024R8B6;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A8Q3WLX1;Q7Z3C4 NUP214;DKFZp686J0330 Nuclear pore complex protein Nup214 yes no 0 0 0 3 0 1 57.257 57.29 3 2.3992E-09 17308 20230619_1882_Aki_TMTPro18x_K_F3 157.47 129.73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16901 511 16012 32107 25714 25714 1 9606 Homo sapiens 0.09430594328978259 LNHQEFK Unmodified 914.46102 0.46101552 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 6 0.816 1 1 1 37.871 37.949 3 0.00038326 8679 20230619_1886_Aki_TMTPro18x_K_F6 169.06 124.53 422540 107750 346900 404500 498050 409720 472090 474280 626990 427220 501090 465060 485370 397280 429350 424460 478700 446080 388450 101710 361160 383590 503990 415110 482040 478810 624270 435760 519010 468250 493170 413560 440250 427400 457320 423580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 603560000 16902 1022;3868 16013 32108;32109;32110 25715;25716 25715 2 9606 Homo sapiens 0.0003634506618936939 LNHVAAGLVSPSLK Unmodified 1404.8089 0.80889876 3797 Q5T760;Q05519-2;Q05519;Q05BU6;Q6PJY9;Q6PKC9;Q6PJB9;Q6MZM2;Q6N079;Q5T757 SRSF11;SFRS11;DKFZp686D02116;DKFZp686P22142 Serine/arginine-rich splicing factor 11 yes no 0 0 0 4 0 1 51.735 51.762 3 5.2523E-05 14746 20230619_1883_Aki_TMTPro18x_K_F4 98.676 82.423 86884 65906 92619 99736 95616 99407 109320 101320 103770 114080 110700 111180 124260 96307 111330 128240 110900 124640 80347 60622 93699 97903 99339 100570 109270 103750 106390 114480 113870 112520 125700 101570 113510 128100 106200 118370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158240000 16903 3797 16014 32111 25717 25717 1 9606 Homo sapiens 0.1226866647712086 LNIGDLQVTK Unmodified 1099.6237 0.62372375 179 Q53GN6;A0A024R201;Q9UNM6;J3KNQ3;B2RBM7;Q9Y6E3;Q9UNM6-2;B4DJ66;H0YD73;E9PL38 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 1 0 1 58.269 58.269 3 0.036614 17787 20230619_1880_Aki_TMTPro18x_K_F1 51.531 27.68 51895 45734 51101 55668 49252 52873 57337 60134 64287 61298 68146 57024 66128 62457 61098 72703 57326 58263 48003 41943 51976 55379 51513 53852 57578 60956 65234 61766 69571 58343 67345 64741 62077 72066 54892 55488 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 999060000 16904 179 16015 32112 25718 25718 1 9606 Homo sapiens 0.07789683677515313 LNIPATNVFANR Unmodified 1328.7201 0.72008375 766 C9JBI3;Q53EY1;A0A024RDL3;A0A024RDL9;P78330 PSPH Phosphoserine phosphatase yes no 0 0 0 4.5 0.5 1 1 57.296 57.328 3 0.000151 16818 20230619_1885_Aki_TMTPro18x_K_F5 87.026 64.109 13018 11249 13754 12461 11115 15331 15876 13769 20084 13594 15916 13571 14193 16662 16728 17841 14830 14995 12047 10308 13870 12529 11909 15244 15854 14174 20024 13770 16440 13903 14692 17122 16868 17751 14209 14271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24626000 16905 766 16016 32113;32114 25719 25719 1 9606 Homo sapiens 0.06887251237480996 LNIPVSQVNPR Unmodified 1235.6986 0.69862003 3387;959 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z1Q9;B7Z3F8;B3KV59;B3KSY7;B3KNQ8;P05023;P05023-4;P05023-3;B7Z3V1;B7Z1N5 ATP1A3;ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 2.5 0.5 1 1 49.409 49.478 2 2.0286E-09 14227 20230619_1881_Aki_TMTPro18x_K_F2 192.12 136.4 418850 340830 332850 424880 413020 512270 512830 488780 587400 553460 585630 559200 603960 445260 522110 625090 621910 628460 386620 312740 347220 423180 426040 510650 513320 502660 593990 556080 601490 563800 611550 472920 538430 625100 594120 596850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 837010000 16906 959;3387 16017 32115;32116 25720;25721 25720 2 9606 Homo sapiens 0.09019866208745952 LNIPWNHIR Unmodified 1161.6407 0.64071122 4586 Q9NRN7;E9PLW6;Q9NRN7-2;E9PNF3 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes no 0 0 0 5 0 1 50.685 50.761 3 3.5778E-05 14051 20230619_1885_Aki_TMTPro18x_K_F5 133.23 111.77 44516 46722 42878 39762 44974 57950 47930 47636 73449 27823 29184 26291 30559 25491 27934 31957 27697 26852 41223 42697 43717 41011 46748 56993 48907 48838 71462 29242 32059 26773 31039 26659 28461 31716 26497 25561 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104030000 16907 4586 16018 32117 25722 25722 1 9606 Homo sapiens 0.06635649073973582 LNIQPSEADYAVDIR Unmodified 1702.8526 0.85261407 2154 A8KAK1;Q9NYU2-2;Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 4 0 1 57.204 57.209 2 3.5122E-10 17209 20230619_1883_Aki_TMTPro18x_K_F4 190.46 140.1 47310 37213 42491 46863 46987 49937 47442 42884 52775 53389 55010 64627 61541 52684 59517 60007 59871 73775 43699 34154 43654 46565 48462 50112 47972 44608 53577 53740 56698 64653 62504 55141 60583 60951 57377 69875 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51098000 16908 2154 16019 32118 25723;25724 25724 2 9606 Homo sapiens 0.029301863929276806 LNIRPLLR Unmodified 993.64473 0.64473396 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 1 8 0 1 47.745 47.803 3 0.00071626 12593 20230619_1888_Aki_TMTPro18x_K_F8 135.77 91.319 131670 105240 112270 124110 107890 125320 137270 129890 145690 154020 121080 114110 170370 133400 96021 206210 184650 171870 121580 96525 115690 123830 113280 126740 136930 133030 147120 153170 127410 118470 168830 140870 104440 203760 175720 163650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77282000 16909 2436 16020 32119 25725 25725 1 9606 Homo sapiens 0.14765738567700737 LNISFPATGCQK Unmodified 1334.6653 0.66527099 1910 Q96DV6;A2A3R6;P62753;A2A3R7 RPS6 40S ribosomal protein S6 yes no 0 0 0 3.5 0.5 1 1 56.477 56.499 3 5.2084E-10 16980 20230619_1882_Aki_TMTPro18x_K_F3 183.79 150.84 1136900 981620 1091900 1042000 994480 1117200 1121600 1094500 1044700 587460 385890 333080 577280 384890 502120 628870 532680 404260 1051200 899170 1111100 1049100 1043900 1123700 1121200 1106300 1041700 613880 435280 352360 579220 408620 514240 615090 508480 386820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1439600000 16910 1910 16021 32120;32121 25726;25727 25726 2 9606 Homo sapiens 0.01132496374520997 LNIWDVGGQK Unmodified 1128.5928 0.59275797 3552 Q53YD8;P36404;V9GYD0;B4DGG0;P36404-2 hCG_23373;ARL2;ARL2-SNX15 ADP-ribosylation factor-like protein 2 yes no 0 0 0 5 3 1 1 60.049 60.061 3 9.6361E-05 18638 20230619_1881_Aki_TMTPro18x_K_F2 130.63 91.364 34799 29928 29657 32005 28820 29322 28254 32630 33679 35633 33291 42831 40352 33606 35501 44747 42532 41945 32148 27416 30547 32135 29989 29952 28714 33185 34020 36053 34549 42820 40734 35550 36624 44604 40622 39871 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19434000 16911 3552 16022 32122;32123 25728;25729 25728 2 9606 Homo sapiens 0.033605303633066796 LNKHEENLK Unmodified 1123.5986 0.59857163 3583 P42766;A4D2M5 RPL35;LOC154880 60S ribosomal protein L35 yes no 0 0 1 6.5 0.5 1 1 37.1 37.167 4 0.0032062 8410 20230619_1886_Aki_TMTPro18x_K_F6 94.801 53.749 68142 53001 106590 109200 164290 135230 151140 130430 95173 74302 120960 60324 52159 40744 133450 37877 57729 39054 63284 48964 105940 105900 165080 134660 151390 132120 100990 77651 119640 61422 59144 42556 129570 38497 55838 37149 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99832000 16912 3583 16023 32124;32125 25730 25730 1 9606 Homo sapiens 0.04171628874951239 LNKPFLFDTK Unmodified 1221.6758 0.67575932 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2;A0A7P0Z484;A0A7P0TAR9;A0A7P0Z4H2;Q16094;Q6ZP56;D6RFL1;A0A7P0TAN9;A0A7P0T8N1 CANX Calnexin yes no 0 0 1 4 0 1 56.704 56.71 3 0.0012439 16943 20230619_1883_Aki_TMTPro18x_K_F4 94.363 62.354 1323200 998830 1029300 1110800 801760 1214700 1206800 1294700 1544800 1457800 1322900 1606200 1625900 1387700 1227100 1723000 1642000 1230900 1220700 915790 1067600 1114400 865560 1221600 1203900 1321100 1545900 1469100 1382500 1615700 1631400 1455300 1280300 1697400 1564200 1175800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1235000000 16913 1700 16024 32126 25731;25732 25731 2 9606 Homo sapiens 0.07378847091285934 LNLAQFLNEDLS Unmodified 1375.6983 0.69834526 4409 Q9BPX3;Q6NUR1 NCAPG Condensin complex subunit 3 yes no 0 0 0 6 0.816 1 1 1 66.808 66.844 2 0.00011182 20899 20230619_1885_Aki_TMTPro18x_K_F5 120.15 109.35 33163 28719 31738 36489 27480 33541 34875 30502 31943 39281 42454 42857 44100 35789 35925 42121 44403 43599 30665 26352 32328 36165 29093 34066 34654 31635 33151 39322 43133 43101 44556 37494 37176 42293 42397 41398 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 118270000 16914 4409 16025 32127;32128;32129 25733;25734 25733 2 9606 Homo sapiens 0.025524016982444664 LNLDSIIGR Unmodified 999.57129 0.57129425 3704 P62136;A0A140VJS9;P62136-2;E9PMD7;P62136-3 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase yes no 0 0 0 1.5 0.5 1 1 60.469 60.475 2 9.2052E-05 18664 20230619_1880_Aki_TMTPro18x_K_F1 156.92 116.92 488820 413160 444810 495690 425120 534530 524660 517340 570500 625450 566000 575530 673200 563660 573610 654780 586080 643650 451760 378920 455640 494340 446420 537070 524680 532580 578920 624760 585690 586070 678840 586750 586200 655710 561030 611250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 328340000 16915 3704 16026 32130;32131 25735;25736;25737 25735 3 9606 Homo sapiens 0.07149145334585683 LNLEAINYMAADGDFK Oxidation (M) 1799.84 0.84000047 1431 A0A384MR27;P09382 LGALS1 Galectin-1 yes no 0 1 0 5.75 0.829 2 1 1 62.016 62.062 2;3 9.0531E-06 19032 20230619_1886_Aki_TMTPro18x_K_F6 99.747 80.169 800150 657330 615030 799530 987860 985950 1114400 993800 1035500 875760 956630 814120 1075200 876430 776880 1204500 996270 1053700 738480 602980 647080 798020 999100 983220 1112900 1011700 1055800 889920 989250 832980 1079400 919410 809760 1195300 951500 1002200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4684400000 16916 1431 16027 32132;32133;32134;32135 25738;25739;25740 25739 912 3 9606 Homo sapiens -0.027925930616220285 LNLEHIATSSAVSK Unmodified 1468.7886 0.78855725 4389 Q96QK1;Q53FR4;Q5HYM2 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 1 0 1 50.3 50.3 4 0.0011566 14526 20230619_1880_Aki_TMTPro18x_K_F1 84.759 62.528 14809 13020 14873 14779 14964 15684 17859 18086 15007 17382 18643 19490 17644 14439 17491 19617 18986 21629 13700 11933 15105 14802 15595 15851 17757 18290 15603 17653 18924 19521 18027 15340 17884 19735 18169 20512 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47658000 16917 4389 16028 32136 25741 25741 1 9606 Homo sapiens 0.07291451026662799 LNLGEEVPVIIHR Unmodified 1487.846 0.84601255 2673 H0Y6A7;Q5TE61;B7Z1I3;B7Z5P3;Q96MZ0;Q96MZ0-4;H0UIB3;A0A087WWT8;Q71U71;Q71U70;Q96MZ0-2 GDAP1L1 Ganglioside-induced differentiation-associated protein 1-like 1 yes no 0 0 0 6.5 0.5 1 1 56.096 56.162 3 1.6941E-15 16215 20230619_1887_Aki_TMTPro18x_K_F7 196.7 159.27 201270 163910 178010 200010 149750 182370 193550 194260 203660 238910 231380 243140 250650 214390 218630 259130 240260 276340 185930 150370 182490 198810 159130 186010 193000 198870 208190 239090 237010 245620 253680 224500 224320 260520 229920 262160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 154100000 16918 2673 16029 32137;32138 25742;25743;25744 25744 3 9606 Homo sapiens 0.12160338022886208 LNLGGDFIK Unmodified 975.53893 0.53893149 3084 H7C0D5;Q9BSR8 YIPF4 Protein YIPF4 yes no 0 0 0 8 0 1 59.567 59.609 2 0.0020168 17636 20230619_1888_Aki_TMTPro18x_K_F8 123.35 64.715 53633 43131 46822 57114 48577 54879 50997 57806 65534 56613 55937 59406 57321 50619 57673 68825 63017 62332 49536 39603 48216 56486 50436 55720 51746 58814 65544 57371 57934 59900 58502 53446 58997 68475 60237 59275 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12905000 16919 3084 16030 32139 25745 25745 1 9606 Homo sapiens 0.05018357931578521 LNLGTVGFYR Unmodified 1138.6135 0.61349341 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B3KU93;A0A8V8TQ95;B7Z1H4;B7Z1V9;B3KTP2;H0YCQ5 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 4.5 0.5 1 1 58.216 58.246 2 9.1314E-08 17174 20230619_1885_Aki_TMTPro18x_K_F5 193.01 158.2 377170 333180 384970 368100 333490 392250 394280 401670 417330 403420 422440 394220 427680 361520 420470 468680 452470 440560 348990 305280 389570 369420 352240 395080 394920 409720 424040 407320 433300 399800 436000 379650 429720 467550 432530 418780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 422580000 16920 2933 16031 32140;32141 25746;25747 25747 2 9606 Homo sapiens 0.04973120742943138 LNLLAHSRPPVPEWDISQDPPK Unmodified 2508.3125 0.31250737 2472 B4DF80;Q9H6R4-4;Q9H6R4;A0A0A0MRW6;Q9H6R4-2;B3KPN5;Q9H6R4-3 NOL6 Nucleolar protein 6 yes no 0 0 1 2 0 1 58.039 58.054 4 0.00016602 17829 20230619_1881_Aki_TMTPro18x_K_F2 73.11 56.231 16964 17962 13415 16078 16366 19358 20250 20117 20701 19030 20899 20608 21713 19620 21386 23267 21434 20872 15687 16421 13989 16449 16885 19352 20200 20467 21064 19340 21472 20828 22126 20453 21766 23186 20503 19851 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30570000 16921 2472 16032 32142 25748 25748 1 9606 Homo sapiens 0.11868361880806333 LNLLDTCAVCHQNIQSR Unmodified 2040.9833 0.98332744 433 A0A024R784;O15164-2;O15164 TRIM24 Transcription intermediary factor 1-alpha yes no 0 0 0 1 0 1 50.533 50.533 3 9.5767E-39 14570 20230619_1880_Aki_TMTPro18x_K_F1 261.76 225.65 33807 30515 30204 33451 28098 37055 35140 36800 40731 41100 36767 33419 47132 37314 33163 44493 45783 42441 31253 27955 30979 33599 29603 37185 35200 37715 41044 41081 38327 34428 47105 38763 34724 44448 43660 40345 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50195000 16922 433 16033 32143 25749 25749 1 9606 Homo sapiens 0.004475107778489473 LNLSSNELK Unmodified 1016.5502 0.55022446 1188 A0A140VJN3;Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes no 0 0 0 7 0 1 50.969 51.047 2 9.0144E-12 14064 20230619_1887_Aki_TMTPro18x_K_F7 222.22 132.46 184080 140920 141540 152560 185230 204930 175850 175220 228650 172100 189090 167670 178170 145720 174600 210020 214640 169580 169820 129160 148040 153830 188900 202610 179420 180930 228200 174110 195240 169860 182050 154400 180000 207660 204670 161660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130460000 16923 1188 16034 32144 25750 25750 1 9606 Homo sapiens 0.042611352350377274 LNLSTRPEK Unmodified 1056.5928 0.59275797 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 1 1.5 0.5 1 1 41.335 41.374 3 0.045959 10462 20230619_1881_Aki_TMTPro18x_K_F2 55.718 22.63 374830 279830 367130 365360 336440 324760 380360 386270 447260 439380 489250 447300 492720 348250 385960 536140 528680 446230 346350 256980 373030 361530 352780 333020 383200 391810 453470 441330 499700 450750 497330 372610 403030 530250 503890 425080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 759520000 16924 2326 16035 32145;32146 25751 25751 1 9606 Homo sapiens 0.0667253036326656 LNLVEAFVEDAELR Unmodified 1616.841 0.84098675 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;V9H023;V9H0D5;B4DL39;B4DSB9;V9H0B2;Q0ZAJ1 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 4.5 1.12 1 1 1 1 66.648 66.682 3 3.1754E-05 21080 20230619_1883_Aki_TMTPro18x_K_F4 91.207 71.111 3001.6 3894.9 2216 3999.4 4810.5 4551.8 3604 3901.7 4042.7 3214.5 3838.7 3562.5 3488 4231.4 5136.5 3285.9 4244.1 3860.2 2779.6 3562.5 2365.4 4035.7 4755.5 4549.8 3716 4012.6 4084.1 3299.4 3934.8 3624.8 3657.2 4287.8 5134.3 3356.5 4066.7 3661.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9363600 16925 3585 16036 32147;32148;32149;32150 25752 25752 1 9606 Homo sapiens 0.05723989369607807 LNLYELK Unmodified 891.50657 0.50656873 1465 A0A384NL22;P49720;A0A087WXQ8;A0A087WY10;A0A087WUL2 PSMB3 Proteasome subunit beta type-3 yes no 0 0 0 8 0 1 58.704 58.75 2 0.024162 17275 20230619_1888_Aki_TMTPro18x_K_F8 94.114 7.3206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16926 1465 16037 32151 25753 25753 1 9606 Homo sapiens 0.05647570528572032 LNMELSEK Unmodified 962.47428 0.47428232 3526 V9HW71;P30040 HEL-S-107;ERP29 Endoplasmic reticulum resident protein 29 yes no 0 0 0 4.5 0.5 2 2 51.1 51.153 2;3 0.00067188 14243 20230619_1885_Aki_TMTPro18x_K_F5 127.68 44.674 260740 206610 236920 248670 232420 282060 275410 239080 305660 323600 343700 377230 345290 310440 326670 401980 402620 382900 240870 189540 242700 248100 243190 281680 276100 249620 311260 324160 351160 378220 351660 327110 337110 401200 384350 363950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 418080000 16927 3526 16038 32152;32153;32154;32155 25754;25755 25755 2 9606 Homo sapiens -0.008455849367237533 LNMTPEEAER Oxidation (M) 1204.5394 0.53940177 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;A0A7I2V3I2;H0YBP5;A0A7I2V4G3;E5RGA2;A0A7I2V5P9;E5RHS5 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 1 0 1.5 0.5 1 1 36.35 36.379 2 0.00078759 8480 20230619_1880_Aki_TMTPro18x_K_F1 113.44 100.4 69343 37625 55754 72157 69415 96030 77292 77268 115680 100550 98897 103540 131520 97902 68463 131820 136340 140110 63881 34778 58105 70241 71493 94749 78614 80838 115010 100540 103610 104830 130180 103060 74819 132170 129820 132980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108190000 16928 1659 16039 32156;32157 25756;25757 25756 1075 2 9606 Homo sapiens -0.054686352015551165 LNMTPEEAER Unmodified 1188.5445 0.54448715 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;A0A7I2V3I2;H0YBP5;A0A7I2V4G3;E5RGA2;A0A7I2V5P9;E5RHS5 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 0 1.5 0.5 1 1 43.062 43.103 2 0.00096836 11483 20230619_1880_Aki_TMTPro18x_K_F1 114.45 92.369 164970 107800 167860 187810 213500 297920 211520 212880 326240 269670 236510 277910 356580 268800 182610 351300 403510 412250 152370 99402 171180 184290 218810 290640 216800 224780 322360 270030 252150 281430 351920 282240 201850 354510 384000 390880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 225370000 16929 1659 16039 32158;32159 25758;25759 25758 2 9606 Homo sapiens -0.04224331338923548 LNNAPVAGYEGDVGSK Unmodified 1589.7686 0.76855009 1664 E9PQZ2;A0A7I2V4R4;A0A7I2V4V4;A0A7P0RGI5;A0A7I2V5F3;Q8NFD3;A0A7I2V4F4;Q6IBE6;Q8N6A7;Q9HAA9;Q11206-5;Q11206-2;Q11206;Q11206-6;Q11206-4;Q11206-3;Q11206-7 ST3GAL4;SIAT4C CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 yes no 0 0 0 5 0 1 49.852 49.928 3 0.009191 13701 20230619_1885_Aki_TMTPro18x_K_F5 64.454 37.425 34353 30538 36009 40748 38545 41451 41818 39021 45752 49037 51484 48959 53006 49233 50356 56012 52952 53567 31795 28033 36509 40309 39909 41807 42098 40313 46636 49025 52608 49732 53950 51114 51427 56030 50643 50902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29597000 16930 1664 16040 32160 25760 25760 1 9606 Homo sapiens -0.002743447039847524 LNNCGMGIGGGK Unmodified 1176.538 0.53796198 162 A0A024R1U0;P46060;B4DY16;H0Y4Q3 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 0 2 0 1 46.788 46.863 3 0.00056792 12974 20230619_1881_Aki_TMTPro18x_K_F2 71.085 56.523 73462 49311 72489 66563 81317 88284 77430 80553 120880 79795 82198 72504 92720 77031 74928 92382 102740 85024 67845 45321 73809 66093 83738 87433 79620 82770 119040 80582 86518 74164 93490 80131 78126 92131 97912 80899 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66652000 16931 162 16041 32161 25761 25761 1 9606 Homo sapiens -0.04324547771284415 LNNELLAK Unmodified 913.52328 0.52328142 2785 CON__P34955 yes yes 0 0 0 8 0 1 51.663 51.74 2 0.0025474 14247 20230619_1888_Aki_TMTPro18x_K_F8 124.98 45.515 + 86315 147710 168710 77626 468370 600110 290590 284990 496210 152530 219130 319950 140860 158140 210620 163050 233480 315830 80987 134470 168660 91041 458890 559770 309140 308890 481740 167260 235160 311370 150020 168630 213970 172430 223740 298060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 272130000 16932 2785 16042 32162 25762 25762 1 0.06306071414530834 LNNLVLFDK Unmodified 1074.6073 0.6073454 3727 P62851 RPS25 40S ribosomal protein S25 yes yes 0 0 0 2 0.816 2 2 2 62.279 62.292 2;3 4.4506E-05 19631 20230619_1881_Aki_TMTPro18x_K_F2 123.5 76.243 731570 571600 650100 698500 554050 701540 699870 696610 749320 858800 702370 694770 878650 708720 688740 996520 797560 874280 675650 524470 666120 695100 587890 708910 698920 716300 759680 854130 730430 713540 882000 746020 711450 988960 762580 831410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3727199999.9999995 16933 3727 16043 32163;32164;32165;32166;32167;32168 25763;25764 25764 2 9606 Homo sapiens 0.0730260251141317 LNPINTTLLK Unmodified 1125.6758 0.67575932 2681 B7Z341;F8WBF9;B7ZLZ9;B7Z323;Q5TH30;Q9UGV2-3;Q9UGV2-2;Q9UGV2 NDRG3 Protein NDRG3 yes no 0 0 0 4 0 1 58.705 58.707 2 4.9799E-11 17781 20230619_1883_Aki_TMTPro18x_K_F4 172.88 103.54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16934 2681 16044 32169 25765 25765 1 9606 Homo sapiens 0.11794847091277916 LNPQEYLTSTACR Unmodified 1551.7351 0.73514147 4016;645 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 no no 0 0 0 5.67 3.3 1 2 53.364 53.401 2;3 2.6046E-06 15722 20230619_1880_Aki_TMTPro18x_K_F1 135.65 113.5 90045 75065 82118 89678 84429 99065 97620 93937 110740 110180 102440 102290 114560 97897 106630 120610 109050 112020 83211 68843 84171 89493 87941 99342 98058 96758 111780 110260 106040 104060 116170 102330 108780 120320 104340 106480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 362580000 16935 4016;645 16045 32170;32171;32172 25766;25767;25768 25766 3 9606 Homo sapiens -0.018656697475080364 LNPTWNHPDQDTEAGFK Unmodified 1968.8966 0.89660415 4544 Q9HB07;F8VR84;Q8WYI2 C12orf10;MST024 UPF0160 protein MYG1, mitochondrial yes no 0 0 0 5 0 1 50.257 50.332 4 1.2356E-05 13898 20230619_1885_Aki_TMTPro18x_K_F5 96.773 76.123 42949 32020 41417 43076 50440 47655 44497 46628 59108 52480 54853 52264 56058 43108 54011 58236 56581 54143 39680 29415 42331 42650 51485 47834 45669 47854 59217 52730 56514 52776 57050 45585 55123 58038 54095 51478 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41062000 16936 4544 16046 32173 25769 25769 1 9606 Homo sapiens -0.04908829180749308 LNPTWNHPDQDTEAGFKR Unmodified 2124.9977 0.99771517 4544 Q9HB07;F8VR84;Q8WYI2 C12orf10;MST024 UPF0160 protein MYG1, mitochondrial yes no 0 0 1 6 0 1 45.464 45.55 4 0.0019858 11940 20230619_1886_Aki_TMTPro18x_K_F6 71.263 63.041 129080 120530 143780 117990 157320 147720 153530 144740 136820 149770 169970 139040 165340 119490 173260 142420 172700 156800 119570 110300 144850 119910 161910 147200 154570 148190 141720 150710 172480 141080 169100 125260 175830 143660 165130 148840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103450000 16937 4544 16047 32174 25770 25770 1 9606 Homo sapiens -0.019783774780535168 LNPVGAK Unmodified 697.41227 0.41227441 4543 Q9HAV7;B4DWV5 GRPEL1 GrpE protein homolog 1, mitochondrial;GrpE protein homolog yes no 0 0 0 1 0 1 43.407 43.407 2 0.02054 11612 20230619_1880_Aki_TMTPro18x_K_F1 110.61 60.492 87816 61090 100180 107450 145950 144340 104180 131910 141360 93363 152610 172380 125040 114220 143010 98059 146500 159530 81220 56326 101430 105100 146760 142820 108710 134530 142130 98860 154990 169360 129380 118880 145050 102390 140220 150830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45868000 16938 4543 16048 32175 25771 25771 1 9606 Homo sapiens 0.05146476497100139 LNQDQLDAVSK Unmodified 1229.6252 0.62518031 3890 Q14444-2;Q14444;G3V153;B3KXU8;E9PLA9;B4DSF8 CAPRIN1 Caprin-1 yes no 0 0 0 4.5 0.5 2 2 49.185 49.242 2;3 1.3522E-08 13616 20230619_1883_Aki_TMTPro18x_K_F4 205.56 145.54 447630 375430 392130 430670 481410 475440 504790 452920 597080 477860 588460 527390 629810 478570 461150 660350 584440 537500 413550 344170 404500 431050 493390 477100 510260 465110 602230 483430 605320 532180 633160 504890 479790 653220 557670 512000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2153800000 16939 3890 16049 32176;32177;32178;32179 25772;25773;25774 25773 3 9606 Homo sapiens 0.019552729756242115 LNQENEHIYNLWCSGR Unmodified 2031.9221 0.92210739 4319 Q96A33;Q96A33-2 CCDC47 Coiled-coil domain-containing protein 47 yes no 0 0 0 7 0 1 52.61 52.68 3 1.7437E-19 14805 20230619_1887_Aki_TMTPro18x_K_F7 207.92 197.38 146070 99890 101940 122890 120070 127090 123460 133350 155840 162870 124350 128870 172220 126200 132100 185140 136200 181110 134590 91712 107600 122270 123500 128370 125280 136530 155870 161980 131170 132310 172220 133520 135570 184680 130580 171890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 437590000 16940 4319 16050 32180 25775 25775 1 9606 Homo sapiens -0.05257677929944293 LNQLKPGLQYK Unmodified 1300.7503 0.75032125 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;B4DDF3 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 1 5.5 0.5 1 1 50.843 50.919 4 2.9833E-05 14189 20230619_1885_Aki_TMTPro18x_K_F5 142.83 127.29 415890 397280 452050 414670 440970 526320 518690 485010 466730 287750 285450 197610 199070 138090 379640 207920 218130 76639 385250 363740 455910 419100 460950 522790 516800 493070 470560 298860 297480 203060 214200 148090 372960 201100 209290 74702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 573930000 16941 3823 16051 32181;32182 25776 25776 1 9606 Homo sapiens 0.11197609902660588 LNQPGTPTR Unmodified 982.51959 0.51959303 3554 P36507;Q7Z370;B3KS97;M0R1B6 MAP2K2;DKFZp686L02273 Dual specificity mitogen-activated protein kinase kinase 2 yes no 0 0 0 7 0.816 1 1 1 34.058 34.1 2 0.002693 7124 20230619_1888_Aki_TMTPro18x_K_F8 104.06 69.804 40887 28915 48872 48210 53729 67038 48948 58425 62148 39107 74862 83690 62924 63254 74409 36360 86410 77606 37836 26638 49057 47318 55358 66101 50088 59755 62926 41946 75767 82190 65214 64482 75902 39414 82500 73306 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 36668000 16942 3554 16052 32183;32184;32185 25777;25778;25779 25779 3 9606 Homo sapiens 0.02763401640675056 LNQPPEDGISSVK Unmodified 1382.7042 0.70415892 1173 J3QT28;A0A140VJF3;O43684-2;O43684;J3QSX4 BUB3 Mitotic checkpoint protein BUB3 yes no 0 0 0 4.33 0.471 2 1 48.847 48.905 2 0.00021325 13279 20230619_1885_Aki_TMTPro18x_K_F5 119.39 101.52 50912 42943 48512 60150 57455 57845 57472 56815 60608 67958 68021 72502 75635 62412 59756 78202 71741 69418 47068 39448 49678 59270 58928 58651 58053 58429 61921 68203 69792 73048 76188 65537 61806 77792 68510 66035 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 103800000 16943 1173 16053 32186;32187;32188 25780;25781 25781 2 9606 Homo sapiens 0.02811500209895712 LNQQPSQGLGPR Unmodified 1293.6789 0.67894722 729 Q0EFC6;B4DYK6;A0A1U9X7R2;A0A024RCR2;P36915;A2AB27 HSR1;GNL1 Guanine nucleotide-binding protein-like 1 yes no 0 0 0 4.5 3.5 1 1 39.503 39.503 2;3 3.4605E-05 9873 20230619_1880_Aki_TMTPro18x_K_F1 135.55 72.063 13961 12518 17371 16164 17722 17575 19140 18014 21848 15105 20284 16637 19531 18410 18634 20086 22172 17666 12943 11486 17359 16047 18394 17679 19300 18300 22010 15486 20828 16910 19932 19007 19165 20021 21149 16822 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21637000 16944 729 16054 32189;32190 25782;25783 25782 2 9606 Homo sapiens 0.0438549019797847 LNQVCATHQHFESR Unmodified 1725.8005 0.80053569 2174 E9PDF6;B0I1S9;O43795-2;O43795;A0A0U1RRI3 MYO1B Unconventional myosin-Ib yes no 0 0 0 7 0 1 34.79 34.866 3 2.5069E-22 7247 20230619_1887_Aki_TMTPro18x_K_F7 230.97 213.9 11772 8518.4 14058 13663 11827 13988 16149 17004 16264 14849 13216 13897 17499 15737 12427 15808 18066 17807 10895 7842.8 14058 13380 12574 14178 16039 17100 16444 15095 13893 14215 17496 16178 13054 15987 17229 16893 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16944000 16945 2174 16055 32191 25784 25784 1 9606 Homo sapiens -0.03333255501797794 LNQVCFDDDGTSSPQDR Unmodified 1952.817 0.8170332 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2;H3BPA9 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 1.33 0.471 2 1 48.87 48.902 2;3 6.2168E-22 13911 20230619_1880_Aki_TMTPro18x_K_F1 182.33 174.02 50630 33676 43524 54103 47682 50721 43802 53199 61562 48958 61553 61554 51518 45169 51225 59825 48208 71082 46707 31017 44919 52878 49133 51580 44972 54060 61649 50094 62706 61388 52885 47912 51988 60479 46313 67310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 480860000 16946 4222 16056 32192;32193;32194 25785;25786 25785 2 9606 Homo sapiens -0.12126263917048163 LNQVIFPVSYNDK Unmodified 1535.7984 0.79839365 2895 E7EQ69;Q9GZZ1;C9J5D1;Q9GZZ1-2;C9JZU6;C9J5J3;A0A0D9SF32;F8WCK0 NAA50 N-alpha-acetyltransferase 50 yes no 0 0 0 2 0 1 61.741 61.751 3 0.0047068 19369 20230619_1881_Aki_TMTPro18x_K_F2 76.262 63.879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16947 2895 16057 32195 25787 25787 1 9606 Homo sapiens 0.05192639032043189 LNQWCNVVR Unmodified 1187.587 0.58696109 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 3.5 0.5 1 1 51.091 51.142 2 0.00010342 14634 20230619_1882_Aki_TMTPro18x_K_F3 160.78 129.35 421420 399620 385220 360570 450010 626160 481330 480070 666460 151810 160030 162240 161940 133950 261540 156610 176080 172580 389780 365470 395360 371090 464590 609460 488750 491590 646540 172460 188340 163560 170120 140350 258900 158250 169270 163760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 257020000 16948 3402 16058 32196;32197 25788;25789 25788 2 9606 Homo sapiens 0.0006710857994676189 LNQYFQK Unmodified 939.48142 0.48141661 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 3.5 0.5 1 1 52.682 52.724 3 0.0018269 15348 20230619_1882_Aki_TMTPro18x_K_F3 122.98 45.605 226760 204310 206550 220370 299350 374360 293000 281730 413760 75660 70444 45097 65444 49637 145970 67089 70772 48781 209660 187150 213080 223230 304030 364600 299110 288640 399890 87350 88203 47608 70852 52007 142420 66373 68289 46607 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252680000 16949 3811 16059 32198;32199 25790;25791 25791 2 9606 Homo sapiens 0.009255157259985936 LNSGVDYR Unmodified 922.45084 0.45084476 3717 P62312 LSM6 U6 snRNA-associated Sm-like protein LSm6 yes yes 0 0 0 4.5 0.5 1 1 39.398 39.465 2 0.00067604 9289 20230619_1885_Aki_TMTPro18x_K_F5 158.61 94.066 400330 237990 385500 379850 514540 502790 422970 450910 579320 333460 380350 403620 424150 348050 349290 355760 461550 407550 369430 219300 394620 373390 521600 497820 436550 460980 572750 345950 401580 404690 428060 361360 362680 360310 440150 386740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 652290000 16950 3717 16060 32200;32201 25792;25793;25794 25794 3 9606 Homo sapiens -0.013482626590530344 LNSKPPNIGFK Unmodified 1213.6819 0.68190733 4705 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 1 5 0 1 49.574 49.65 3 0.00092265 13667 20230619_1885_Aki_TMTPro18x_K_F5 93.959 75.345 538090 422400 473580 541220 480730 557280 528300 527060 598260 605720 639340 602890 687380 488400 523310 693000 665740 660950 496940 387750 486980 536920 500480 561540 532200 542720 607290 607800 655680 608600 691650 518820 543820 690770 635570 628130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114420000 16951 4705 16061 32202 25795;25796 25796 2 9606 Homo sapiens 0.0836136532279852 LNSNDEDIHTANER Unmodified 1626.7234 0.72339081 768 A0A5F9ZHC6;B4DU69;A0A5F9ZHM8;A0A0S2Z3B0;F8W943;A0A0S2Z316;A0A024RDL8;P04424-3;P04424-2;P04424;Q6XYD2 ASL Argininosuccinate lyase yes no 0 0 0 1 0 1 34.111 34.111 3 2.0767E-16 7630 20230619_1880_Aki_TMTPro18x_K_F1 201.72 186.34 15077 9925.3 11613 15903 14001 15517 14858 15292 21747 19101 21060 22078 20003 17580 16326 18589 23407 22325 13897 9141.8 12147 15549 14399 15708 15140 15743 21727 19196 21592 22114 20285 18337 17069 18868 22320 21168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30381000 16952 768 16062 32203 25797 25797 1 9606 Homo sapiens -0.06490195237120133 LNSSTEANVIK Unmodified 1174.6194 0.61936665 2439 Q8NI08;Q8NI08-2;B3KXK4;H0UI55;Q8N3C8;Q8NI08-7;Q8N4U9;Q3LID7;Q6PK00 NCOA7;DKFZp761B2210;Nbla00052 Nuclear receptor coactivator 7 yes no 0 0 0 6 0 1 46.368 46.451 2 1.0988E-16 12336 20230619_1886_Aki_TMTPro18x_K_F6 227.94 167.16 33976 26405 27635 37760 24674 25558 33759 32443 41629 42394 45996 41463 47627 37180 40884 52230 60868 53411 31359 24270 28616 37025 26119 26929 33754 32957 42133 42279 47019 42025 48237 39311 42854 52270 57993 50745 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31122000 16953 2439 16063 32204 25798 25798 1 9606 Homo sapiens 0.039041744639462195 LNTFGDEVFNDPK Unmodified 1494.6991 0.69907354 558 A0A024R972;P11047 LAMC1 Laminin subunit gamma-1 yes no 0 0 0 4.5 0.5 1 1 60.006 60.033 3 0.00016974 17927 20230619_1885_Aki_TMTPro18x_K_F5 96.371 82.113 57055 49565 57111 58305 57817 75299 62692 62032 75967 65407 64866 67494 72972 58276 69787 79190 78124 74334 52778 45444 58044 58387 60238 74523 63339 64374 76185 66019 67456 68132 74058 61534 71530 78942 74642 70668 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 66378000 16954 558 16064 32205;32206 25799;25800 25800 2 9606 Homo sapiens -0.028488036527278382 LNTGILNK Unmodified 871.51272 0.51271674 2724 P11387;B9EG90;A0A7P0T852 TOP1 DNA topoisomerase 1 yes no 0 0 0 3 0 1 51.271 51.342 2 0.0063288 14719 20230619_1882_Aki_TMTPro18x_K_F3 123.16 54.941 226320 168510 190570 211960 183650 245360 206170 222000 249030 223550 261330 234460 256570 207840 228860 264650 256620 235730 208880 154690 196620 210890 192410 244910 207990 228410 251620 226240 267120 236830 260630 218270 234930 263330 245120 224280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178500000 16955 2724 16065 32207 25801 25801 1 9606 Homo sapiens 0.071820887600893 LNTLLQR Unmodified 856.51305 0.51305109 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4;A0A1W2PPE9 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 3.5 0.5 1 1 50.404 50.457 2 0.0056347 14168 20230619_1883_Aki_TMTPro18x_K_F4 139.31 39.247 2963400 2515300 2547300 2766200 3206700 3616800 3051200 2773500 2050600 1961000 2020600 1464500 1668700 1360300 2379600 2074700 1993300 1119900 2737600 2304900 2633600 2784100 3273300 3573900 3054700 2870700 2145200 2010500 2057900 1509300 1747400 1443500 2384000 2021400 1904900 1077000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3697199999.9999995 16956 3776 16066 32208;32209 25802;25803 25803 2 9606 Homo sapiens 0.0790550847995064 LNTQEIFDDWAR Unmodified 1506.7103 0.71030693 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4 0 1 62.71 62.715 2 1.703E-06 19496 20230619_1883_Aki_TMTPro18x_K_F4 152.14 123.05 53407 45922 48808 57588 48545 60283 54189 57678 67314 61332 58858 71998 78019 58940 58044 73553 68316 73482 49364 42131 50019 57223 50680 60676 54725 59205 67513 62120 61697 72132 78029 62027 60027 73631 65301 69775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91772000 16957 3881 16067 32210 25804 25804 1 9606 Homo sapiens -0.022779815585863616 LNVAEVTQSEIAQK Unmodified 1528.8097 0.80968662 2705 E9PS97;B7Z952;Q9NVD7 PARVA Alpha-parvin yes no 0 0 0 5.5 0.5 1 1 56.645 56.717 3 3.2293E-05 16706 20230619_1886_Aki_TMTPro18x_K_F6 107.61 87.502 96488 72152 86916 97033 107970 123400 109410 116200 145700 116220 119850 122330 131840 111040 132960 125270 129810 139890 89098 66281 89477 96265 110640 122570 111330 119160 145280 117720 124740 123530 134230 115700 134970 126500 124300 132670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 299540000 16958 2705 16068 32211;32212 25805;25806 25806 2 9606 Homo sapiens 0.06643416335532493 LNVCVSK Unmodified 818.43202 0.43202358 1455;1520;1144 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;M0QYT0;A0A3B3ITJ4;C9IYN3;A8K894;V9GYK2;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9-4;Q8WVV9;B7WPG3;Q8WVV9-5;H7C464 HNRNPL;HNRNPLL Heterogeneous nuclear ribonucleoprotein L;Heterogeneous nuclear ribonucleoprotein L-like no no 0 0 0 1.5 0.5 1 1 47.183 47.221 2 0.0056963 13126 20230619_1881_Aki_TMTPro18x_K_F2 138.83 45.907 1033200 651380 951490 1027400 1127300 1193500 1141400 1158700 1374800 1208700 1357800 1392800 867070 1178300 607410 1015900 1134000 1408800 953350 599960 976420 1008300 1157500 1193000 1157300 1187400 1385600 1224800 1371900 1397400 891670 1212500 653730 1044400 1081800 1332900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 703230000 16959 1455;1520;1144 16069 32213;32214 25807;25808 25808 2 9606 Homo sapiens 0.015544844455575912 LNVDFALIHK Unmodified 1168.6604 0.66044361 3683 Q53FW2;P60891;B1ALA9;A0A2R8Y7H4;P60891-2;A0A6Q8PHI4;A0A6Q8PEU0;A0A6Q8PG82 PRPS1 Ribose-phosphate pyrophosphokinase 1 yes no 0 0 0 2 0 1 58.51 58.523 3 1.284E-05 17990 20230619_1881_Aki_TMTPro18x_K_F2 147.28 123.9 150020 115450 126740 134450 108740 134040 125380 116850 134900 146370 161910 160570 169170 146460 178700 161290 167250 179030 138490 105890 130460 134230 114990 135180 125810 121430 138000 146780 165210 161890 172860 152340 180820 162900 160220 169810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43129000 16960 3683 16070 32215 25809 25809 1 9606 Homo sapiens 0.08285980294067485 LNVEGEHCDVCK Unmodified 1458.6231 0.62314818 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;A0A7I2V3I5;A0A7I2V2T9;A0A7I2V3J7;A0A7I2V682;A0A7I2V407;A0A7I2V2J0;A0A7I2V5R0;E7EPA6;A0A7I2V2R2;A0A7I2V5T9;C9J296 LAMB1 Laminin subunit beta-1 yes no 0 0 0 3 0.816 1 1 1 40.993 41.052 3 6.3671E-07 10042 20230619_1882_Aki_TMTPro18x_K_F3 137.8 109.83 131930 93651 121250 116680 150270 146150 153830 144090 198120 165630 164600 164980 215670 154180 163030 240410 201240 187170 121810 85980 124460 116360 153820 145560 156190 147900 197980 166310 172650 167320 215850 164010 169240 236980 192080 178390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 304300000 16961 3015 16071 32216;32217;32218 25810 25810 1 9606 Homo sapiens -0.08781847096133788 LNVTDSVINK Unmodified 1101.603 0.60298831 4420 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 yes yes 0 0 0 7.5 0.5 1 1 52.444 52.518 3 0.00052234 14636 20230619_1888_Aki_TMTPro18x_K_F8 100.88 50.838 67833 54308 58915 71811 50524 53867 63416 53421 70489 79305 90438 77883 92387 75335 74759 96102 78799 79132 62647 49866 60536 70826 53499 55838 63421 55370 72220 78720 91829 79115 93351 78882 76674 95235 75358 75339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210290000 16962 4420 16072 32219;32220 25811 25811 1 9606 Homo sapiens 0.05625093297862804 LNVTEQEK Unmodified 959.49238 0.49237523 293;3183 A0A024R4F1;P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;A4UCS8;A0A2R8Y6I8;L0R849 ENO1;EDARADD Alpha-enolase;Enolase no no 0 0 0 3.5 0.5 1 1 42.952 43.006 2 6.8375E-05 10892 20230619_1882_Aki_TMTPro18x_K_F3 206.03 99.893 483940 229100 562360 548890 770840 962710 557080 747740 798820 501870 806440 1001500 615540 762600 446770 434190 1095400 1201500 446910 212750 567830 532670 779650 936010 582160 771540 799030 536110 819520 984870 628620 776940 492950 484540 1042600 1132600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1395200000 16963 293;3183 16073 32221;32222 25812;25813 25812 2 9606 Homo sapiens 0.011008733096218748 LNVTVQDQEEHR Unmodified 1466.7114 0.71136956 1589 H0YFP7;Q86U68;H0YH69;A0A5K1VW28;Q659C5;Q9HBU6-2;Q9HBU6 ETNK1;DKFZp434E1212 Ethanolamine kinase 1 yes no 0 0 0 2 0 1 37.922 37.985 3 3.1669E-07 8910 20230619_1881_Aki_TMTPro18x_K_F2 158.25 138.68 34736 27700 33096 36078 40453 39563 36573 38638 45094 39408 46031 42559 44234 38938 40848 43582 51559 42781 32101 25431 33876 35788 41309 39732 37374 39553 45478 39894 47078 42961 45061 40522 42198 43675 49167 40674 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75592000 16964 1589 16074 32223 25814 25814 1 9606 Homo sapiens -0.0033176718966387853 LNVVAFLNELPK Unmodified 1355.7813 0.78128702 4657 Q9UBU9;E9PIN3;Q68CW9 NXF1;DKFZp667O0311 Nuclear RNA export factor 1 yes no 0 0 0 3.5 0.5 1 1 65.359 65.38 3 0.0013389 20711 20230619_1882_Aki_TMTPro18x_K_F3 84.718 64.611 15207 13789 13347 19806 18078 20993 16712 19542 21372 18471 20141 15295 19359 19098 22387 22307 20146 22070 14056 12667 13825 19504 18388 21095 17077 20029 21453 18641 20663 15833 19943 19738 22589 22353 19311 20957 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56465000 16965 4657 16075 32224;32225 25815;25816 25815 2 9606 Homo sapiens 0.1176276321689329 LNVWDIGGQR Unmodified 1156.5989 0.59890598 3553 P36405 ARL3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 3.67 3.09 1 1 1 57.383 57.406 2 2.8285E-05 17415 20230619_1880_Aki_TMTPro18x_K_F1 156.18 121.46 264400 235990 257380 263460 207060 254480 247290 240660 270370 312490 293320 288490 332790 263970 307190 338900 315110 329230 244570 216240 261320 263790 220360 257740 247860 248800 275320 311180 301590 293150 337030 277180 313440 338720 301520 312750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 437520000 16966 3553 16076 32226;32227;32228 25817;25818;25819 25817 3 9606 Homo sapiens 0.026870485947938505 LNWLSVDFNNWK Unmodified 1534.7569 0.75686319 647 A0A024RB32;Q15185-4;Q15185;A0A087WYT3;B3KUY2;B4DDC6 PTGES3 Prostaglandin E synthase 3 yes no 0 0 0 4 0 1 64.968 64.978 3 1.9468E-13 20416 20230619_1883_Aki_TMTPro18x_K_F4 208.72 188.61 22266 13452 17531 19855 12137 21414 18652 20564 32242 22581 21614 34434 36400 34474 21503 36482 36374 44938 20519 12382 18145 19537 13313 21486 18845 21124 31633 23104 23390 34394 36020 35655 23032 37054 34718 42561 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38331000 16967 647 16077 32229 25820 25820 1 9606 Homo sapiens 0.010875030633997085 LNWTGTSK Unmodified 905.46068 0.46068117 3356 O95433;O95433-2;H0YJG7;H0YJU2 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 2.5 0.5 1 1 49.431 49.499 2 0.0089404 13879 20230619_1882_Aki_TMTPro18x_K_F3 103.19 38.625 411800 325200 423940 437390 513440 484080 516320 490690 589200 538870 538880 504350 591380 486360 417990 597660 686200 585560 380790 298670 431010 433100 525650 486270 522570 502120 594190 541120 557100 513220 593870 508300 443830 597580 653270 556670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 549210000 16968 3356 16078 32230;32231 25821;25822 25822 2 9606 Homo sapiens 0.004169253463373934 LNYGIPAIVK Unmodified 1086.6437 0.64373091 173 A0A0S2Z487;A0A024R1X8;P14923;A0A0S2Z495 JUP Junction plakoglobin yes no 0 0 0 4 0 1 60.468 60.471 3 0.037299 18514 20230619_1883_Aki_TMTPro18x_K_F4 51.092 9.9282 49795 40702 45571 48412 61644 58541 53282 54721 64111 43118 38118 36753 42681 32820 44677 45472 37422 41520 46011 37330 46888 48395 62484 58368 54528 55845 63638 44045 40538 37492 43491 34672 45001 45269 35903 39463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21812000 16969 173 16079 32232 25823 25823 1 9606 Homo sapiens 0.10387479408132094 LPAAGVGDMVMATVK Oxidation (M) 1474.7524 0.75237144 153 Q9BTQ7;A0A024R1Q8;P62829;C9JD32;B9ZVP7;J3KT29 RPL23 60S ribosomal protein L23 yes no 0 1 0 1.5 0.5 1 1 58.29 58.298 3 0.00077004 17788 20230619_1880_Aki_TMTPro18x_K_F1 73.877 36.103 184040 148900 178120 196770 160420 183350 192600 187370 218090 199520 188530 168690 202150 166320 180910 235760 208770 195750 170120 136720 181290 194590 168970 186490 193140 191520 219560 200100 195290 172740 204880 175310 186180 233390 199390 186400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 311470000 16970 153 16080 32233;32234 25824;25825;25826 25825 85;86 3 9606 Homo sapiens 0.033985345339260675 LPAAGVGDMVMATVK Unmodified 1458.7575 0.75745681 153 Q9BTQ7;A0A024R1Q8;P62829;C9JD32;B9ZVP7;J3KT29 RPL23 60S ribosomal protein L23 yes no 0 0 0 2 0 1 62.589 62.598 2 2.3363E-13 19793 20230619_1881_Aki_TMTPro18x_K_F2 172.13 133.11 77382 65460 83062 77811 69852 111470 89224 80626 102990 82337 77680 70868 77012 64056 70302 97573 83765 78191 71612 60028 83724 78004 74389 109370 89249 84548 103070 82851 80816 72306 78323 68061 72501 96343 79977 74492 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41788000 16971 153 16080 32235 25827 25827 1 9606 Homo sapiens 0.046428383965348985 LPAAGVGDMVMATVK 2 Oxidation (M) 1490.7473 0.74728606 153 Q9BTQ7;A0A024R1Q8;P62829;C9JD32;B9ZVP7;J3KT29 RPL23 60S ribosomal protein L23 yes no 0 2 0 8 0 1 52.028 52.105 3 0.0046729 14433 20230619_1888_Aki_TMTPro18x_K_F8 67.964 54.983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16972 153 16080 32236 25828 25828 85;86 1 9606 Homo sapiens 0.021542306713172366 LPACVVDCGTGYTK Unmodified 1539.7061 0.70614953 622 P61158;A0A024RAI1;F8WE84;F8WEW2 ACTR3 Actin-related protein 3 yes no 0 0 0 7.5 0.5 1 1 53.901 53.97 3 6.0018E-09 15239 20230619_1888_Aki_TMTPro18x_K_F8 160.69 148.52 127370 90507 102150 127170 135130 147910 129230 129470 140240 156450 140540 132060 153150 130260 124860 181470 158180 153430 117490 83201 106510 125600 137650 147540 130970 134240 142430 155930 144660 135190 154600 137110 129620 179790 150990 146040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 697570000 16973 622 16081 32237;32238 25829 25829 1 9606 Homo sapiens -0.04211530368138483 LPAELQELPGLSHQYWSAPSDK Unmodified 2465.2227 0.22268931 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1;G3V3C7;A0A0C4DGK8;H7C4A8;G3V5M0;G3V359 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 0 8 0 1 62.373 62.398 3 0.034413 18797 20230619_1888_Aki_TMTPro18x_K_F8 52.909 44.309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16974 3515 16082 32239 25830 25830 1 9606 Homo sapiens 0.048686874816667114 LPAEPPALLQTHPPCR Unmodified 1795.9403 0.94032364 1216 A0A140VK05;B4DN86;Q92667-2;Q92667;I3L0K6;I3L2A2;I3L2N7 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 0 0 0 1 0 1 50.823 50.823 3 1.8219E-15 14707 20230619_1880_Aki_TMTPro18x_K_F1 192.4 169.87 71481 52141 70186 81943 71167 92952 77038 79416 102320 78525 75774 79380 90884 65609 74351 97332 105040 82488 66042 47991 71508 80382 74161 92767 78111 82048 101700 79491 79664 80115 91466 69839 77705 96398 100050 78588 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124880000 16975 1216 16083 32240 25831 25831 1 9606 Homo sapiens 0.07419108782710282 LPASFDAR Unmodified 875.45012 0.45011648 226 P07858;E9PHZ5;A0A024R374;A8K2H4;B4DL49;A0A7P0NGZ6;A0A7I2YQK9;A0A7I2V668;E9PQM1;A0A7I2V440;E9PR21;E9PSG5;A0A7I2V4Z9;E9PLY3;A0A7I2V4S6;E9PKQ7;E9PNL5;E9PCB3;Q5HYG5;A0A7I2V2J1;A0A7I2V302;E9PS78 CTSB;DKFZp686N0152 Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes no 0 0 0 6 0.816 1 1 1 47.15 47.232 2 0.0024813 12679 20230619_1886_Aki_TMTPro18x_K_F6 126.04 82.822 2264500 1838800 1846500 1761200 2539100 2773400 3316900 3215400 4275900 2569500 2791400 3025800 2690900 2208400 2551400 3280000 3370000 2799300 2090600 1683400 1921500 1800600 2605300 2738200 3325200 3235300 4235900 2647600 2931000 3024600 2744300 2360600 2645900 3249800 3212500 2666000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1693999999.9999998 16976 226 16084 32241;32242;32243 25832;25833 25832 2 9606 Homo sapiens 0.007409426919025464 LPATIAR Unmodified 740.45447 0.45447358 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8Y7I0;A0A2R8Y7M9 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 0 1.5 0.5 1 1 42.913 42.954 2 0.020304 11173 20230619_1881_Aki_TMTPro18x_K_F2 104.76 27.268 292880 217640 260130 298640 307490 350360 303680 321560 451220 322490 373970 369150 395220 328600 332330 378890 449940 361610 270410 199980 267920 295490 316000 349590 310920 330490 447800 327610 388110 371390 399820 342930 345740 378890 428750 343970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 342300000 16977 1005 16085 32244;32245 25834 25834 1 9606 Homo sapiens 0.07386451905460945 LPAVSSVACGASVGYAVTK Unmodified 1835.9451 0.94513424 1074 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;P18754-2 RCC1 Regulator of chromosome condensation yes no 0 0 0 3.5 0.5 1 1 59.478 59.494 3 4.6725E-15 18074 20230619_1883_Aki_TMTPro18x_K_F4 164.53 148.22 58692 63372 71791 76551 63176 75438 92280 79952 91719 83807 80979 57998 90115 69460 78479 95256 104030 94522 54479 58077 71769 76225 67058 76464 91301 81498 93020 83738 83841 60571 91118 72706 81504 95205 99223 89820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 330730000 16978 1074 16086 32246;32247 25835;25836 25835 2 9606 Homo sapiens 0.06059948134793558 LPAVVTADLR Unmodified 1053.6182 0.61824444 3563 P38117-2;P38117;M0QY67 ETFB Electron transfer flavoprotein subunit beta yes no 0 0 0 7.5 0.5 1 1 56.465 56.522 2 0.00018995 16389 20230619_1888_Aki_TMTPro18x_K_F8 138.4 57.099 137580 86485 102040 124510 118000 134190 137570 130070 178570 115840 123540 139600 160010 156980 100770 159180 193900 191590 126760 79571 107000 122680 122020 134810 138740 132830 177220 118750 130970 141270 159620 161420 108960 161560 184610 181630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 342030000 16979 3563 16087 32248;32249 25837 25837 1 9606 Homo sapiens 0.09358004885689297 LPCIFICENNR Unmodified 1434.6748 0.67478982 699 P08559-4;P08559-2;P08559;Q5JPU2;P08559-3;A0A024RBX9;Q53GE3;A5YPB6;A5PHJ9 PDHA1;PDHA1/LOC79064 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha yes no 0 0 0 1.5 0.5 1 1 60.163 60.169 3 0.014402 18691 20230619_1881_Aki_TMTPro18x_K_F2 52.247 41.875 56177 45722 58596 68746 61948 71696 57483 63940 67297 66585 64877 69096 73835 64435 73239 77126 73806 82586 51962 42042 59430 67526 63994 72064 58561 65927 67947 67235 67115 69877 75056 67295 74540 77595 70672 78351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70677000 16980 699 16088 32250;32251 25838 25838 1 9606 Homo sapiens -0.025160586115589467 LPCRDDDGVTAK Unmodified 1345.6296 0.62961376 1007 J3QRU8;A0A0C4DGN6;Q59FC3;Q9Y2X7;Q9Y2X7-3;K7EN79;Q9Y2X7-2 GIT1 ARF GTPase-activating protein GIT1 yes no 0 0 1 4 0 1 40.503 40.545 3 0.017027 9774 20230619_1883_Aki_TMTPro18x_K_F4 51.939 36.12 114680 87500 110290 115990 142640 148450 130190 137270 163020 146470 144370 139720 150360 119680 147530 144420 152960 129280 105960 80361 112910 115200 145260 147400 133010 141190 163500 147360 149250 141470 153090 125440 150340 143920 146140 123040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44427000 16981 1007 16089 32252 25839 25839 1 9606 Homo sapiens -0.029375858731327753 LPCRDDDSVTAK Unmodified 1375.6402 0.64017845 677 A0A024RBI8;B4E2E7;Q6FI58;B5BU58;B4E027;R4GNG3;F8W822;F8VXI9;Q14161-8;Q14161-3;Q14161-5;Q14161-4;Q14161-7;Q14161-10;Q14161-6;Q14161-9;Q14161-11;Q14161-2;Q14161 GIT2 ARF GTPase-activating protein GIT2 yes no 0 0 1 4 0 1 40.425 40.468 3 0.0045478 9758 20230619_1883_Aki_TMTPro18x_K_F4 72.031 48.612 75828 58712 68358 75731 96254 94868 86735 91583 124490 92874 109630 113150 104770 103390 93553 119280 128990 118910 70036 53903 70513 75322 97514 94422 89148 93799 123980 94488 112970 113660 106700 107730 97422 119520 123000 112980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52243000 16982 677 16090 32253 25840 25840 1 9606 Homo sapiens -0.03261603218697928 LPDAYER Unmodified 862.41848 0.418482 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 3 0.816 1 1 1 42.223 42.285 2 0.052896 10877 20230619_1881_Aki_TMTPro18x_K_F2 84.916 42.821 236350 191920 243260 255690 311550 352840 311650 290260 359210 310220 383010 412490 362990 311300 346810 346910 437930 382250 218590 176230 247690 254150 318290 347900 315620 301440 363970 315660 391180 410570 370440 326280 357940 350060 417740 362900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 437450000 16983 1464 16091 32254;32255;32256 25841 25841 1 9606 Homo sapiens -0.018230500620575185 LPDDDPTAVAGSFSCTMK Unmodified 1910.839 0.83901419 1219 A0A140VK12;Q9UBF2;Q9H9B7;B3KND4;Q9H279 COPG2 Coatomer subunit gamma-2;Coatomer subunit gamma yes no 0 0 0 5.5 0.5 1 1 60.538 60.592 3 1.1455E-06 18369 20230619_1886_Aki_TMTPro18x_K_F6 109.38 100.56 32880 26312 30753 39152 27622 31582 34364 37894 41371 38313 36312 37165 42236 35502 30909 42924 43486 50064 30383 24192 31422 38368 29141 32640 34485 38291 41550 38663 37746 37733 42392 37088 32391 43373 41531 47451 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29950000 16984 1219 16092 32257;32258 25842 25842 1 9606 Homo sapiens -0.07997175492846509 LPDDQIPK Unmodified 924.49165 0.49164694 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;Q8WTZ9;O14943 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 4 0 1 49.09 49.128 2 0.0081338 13575 20230619_1883_Aki_TMTPro18x_K_F4 105.57 70.462 172460 150760 149310 186780 201540 226970 206820 185260 255120 255120 263670 306200 305960 220030 237040 317310 326990 349340 159360 138290 154640 186110 205510 225520 209610 194090 257610 255650 272180 305510 307470 235160 247660 318810 312150 331380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227860000 16985 1831 16093 32259 25843 25843 1 9606 Homo sapiens 0.02638078660561405 LPDGTSLTQTFR Unmodified 1334.683 0.68302954 318 B4E0P8;A0A087WTZ5;E9PJ81;E9PRQ7;A0A024R598;A0A024R539;Q04323;Q04323-2 UBXN1;LOC51035 UBX domain-containing protein 1 yes no 0 0 0 4.5 3.5 1 1 55.283 55.314 2 1.6802E-06 16558 20230619_1880_Aki_TMTPro18x_K_F1 184.71 160.73 184200 164740 179060 189770 172860 217310 192330 199670 232990 215990 204860 219130 224360 184000 226300 255050 230700 261790 170380 150990 182330 189980 180840 217220 194090 205610 233970 217540 212510 221140 228440 194770 230500 255430 220900 248460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 537260000 16986 318 16094 32260;32261 25844;25845 25844 2 9606 Homo sapiens 0.029075349010327045 LPDGYEFK Unmodified 967.4651 0.46509784 1431 A0A384MR27;P09382 LGALS1 Galectin-1 yes no 0 0 0 4.67 1.49 1 1 2 2 2 1 55.065 55.113 2;3 0.0021693 15868 20230619_1885_Aki_TMTPro18x_K_F5 106.91 51.235 993400 849510 931950 1100900 1540300 1693000 1758300 1688900 1800800 1649000 1400000 1366100 1846900 1236500 1363000 1730100 1410700 1424900 918350 779670 962630 1098600 1557200 1666500 1760000 1723500 1817000 1660200 1474400 1395800 1845500 1307300 1399100 1712500 1349400 1356600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7607199999.999999 16987 1431 16095 32262;32263;32264;32265;32266;32267;32268;32269;32270 25846;25847;25848 25847 3 9606 Homo sapiens -0.01993610230761078 LPDPFTPNLK Unmodified 1140.6179 0.61791009 1957 A5YKK6;A5YKK6-2;A5YKK6-3;B4DYL7;B3KPW6;B7Z6X2;B3KS60 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 1 0 1 61.459 61.459 3 0.00026486 19086 20230619_1880_Aki_TMTPro18x_K_F1 101.11 83.669 27506 21451 27385 30651 24527 33302 28290 27056 28295 35545 30235 33179 37133 28138 34344 39293 33913 39162 25426 19715 27812 30215 25847 33308 28317 28307 28954 35386 31260 33610 37521 29801 34978 39282 32489 37178 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30893000 16988 1957 16096 32271 25849 25849 1 9606 Homo sapiens 0.05322585165822602 LPEAAFLAR Unmodified 986.55492 0.5549159 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258 COPB2 Coatomer subunit beta' yes no 0 0 0 8 0 1 56.464 56.52 2 0.0020453 16366 20230619_1888_Aki_TMTPro18x_K_F8 110.12 70.017 251030 215900 231840 255960 244870 287910 293340 290560 303640 296250 277960 273880 315840 260850 271960 350810 309000 315750 232050 197960 237510 255650 254750 288750 293250 296770 307820 298420 288040 278770 319050 274270 279810 348880 295330 300250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 586190000 16989 3031 16097 32272 25850 25850 1 9606 Homo sapiens 0.0611006416845612 LPEASQSPLVLK Unmodified 1280.734 0.73400248 2900;4026 E7ESY4;Q13330-3;Q13330;A0A024R6P5;H0Y4T7;F8W9Y9;Q59FW1;Q9BRL8 MTA1 Metastasis-associated protein MTA1 no no 0 0 0 8 0 1 57.374 57.426 3 4.949E-05 16714 20230619_1888_Aki_TMTPro18x_K_F8 117.79 89.394 81192 72843 81585 84910 74175 82938 82739 79054 98301 93583 80205 82413 93982 77520 89651 92043 88745 93021 75125 66772 82749 84753 77887 83950 83417 81442 98588 93483 83776 83980 95264 80924 91202 92314 84949 88326 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82496000 16990 2900;4026 16098 32273 25851 25851 1 9606 Homo sapiens 0.1048648394587417 LPEDPLLSGLLDSPALK Unmodified 1776.9873 0.98731663 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 7.5 0.5 1 1 65.569 65.591 4 5.3391E-09 20338 20230619_1887_Aki_TMTPro18x_K_F7 126.77 107.94 88574 61490 79412 72029 50008 62747 60389 63058 60482 90118 91291 89231 89079 72981 76137 110070 89502 91686 81755 56425 80931 71800 54629 64169 60398 65137 62951 89528 92091 90112 90347 77762 78581 108880 85521 87271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 224620000 16991 3606 16099 32274;32275 25852 25852 1 9606 Homo sapiens 0.12990246814865714 LPEEIRR Unmodified 911.51886 0.51886475 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 1 5 0 1 37.047 37.14 3 0.018443 8368 20230619_1885_Aki_TMTPro18x_K_F5 77.741 20.638 103260 73015 94652 98927 122700 131950 119260 128640 154470 105310 132200 141060 124160 108200 124550 114300 143120 138950 95337 67095 97317 98196 125190 130810 121520 130980 154290 108840 136400 140450 127040 113010 127600 116180 136730 131730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41684000 16992 673 16100 32276 25853;25854 25853 2 9606 Homo sapiens 0.05956606991605895 LPEEPITR Unmodified 953.5182 0.51819605 4470 Q9BYD2;Q5SZR1 MRPL9 39S ribosomal protein L9, mitochondrial yes no 0 0 0 3.5 0.5 1 1 44.307 44.366 2 0.0065893 11554 20230619_1882_Aki_TMTPro18x_K_F3 110.12 91.385 189090 146900 166010 200140 221670 240370 237840 226810 277120 237290 263580 233450 271690 229440 229470 264960 273060 262390 174610 134940 171640 198180 226330 239660 239970 232920 279430 239260 271180 237220 275040 238710 236680 265460 260760 249290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176860000 16993 4470 16101 32277;32278 25855 25855 1 9606 Homo sapiens 0.039577675518899014 LPEFYDETLLR Unmodified 1394.7082 0.70818166 2488 B4DHJ9;Q15386 UBE3C Ubiquitin-protein ligase E3C yes no 0 0 0 4.5 0.5 1 1 62.631 62.657 2 0.00010533 19458 20230619_1883_Aki_TMTPro18x_K_F4 137.46 102.01 56089 43052 54733 58728 55396 63907 63392 66393 73283 78569 81285 79642 80422 72811 72056 88614 83045 96421 51834 39551 55753 58083 57734 64268 63778 67964 74441 78772 82966 80590 81744 76165 74123 89178 79444 91449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43826000 16994 2488 16102 32279;32280 25856 25856 1 9606 Homo sapiens 0.02661589703620848 LPEGDLGK Unmodified 827.43888 0.43888309 3110 I3L397;I3L504;P63241;P63241-2;Q6IS14 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 0 0 0 3.75 0.829 2 1 1 48.468 48.532 2;3 0.018192 13126 20230619_1885_Aki_TMTPro18x_K_F5 96.711 59.69 103390 70614 90138 106090 91306 124250 113510 99943 154300 140200 151230 162760 161870 135730 125980 150900 173330 170710 95403 64977 92823 104380 95631 123610 114370 104910 154700 140290 155790 163210 163190 141730 131480 152440 165360 161940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 523440000 16995 3110 16103 32281;32282;32283;32284 25857;25858 25858 2 9606 Homo sapiens 0.018261205977637474 LPEHCIEYVR Unmodified 1314.6391 0.63905624 2301 J3JZZ9;B2RBP3;Q8TBC4;Q8TBC4-2;F8W8D4;B7Z5F6 UBE1C;UBA3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 4.5 0.5 1 1 42.476 42.539 3 1.8639E-05 10637 20230619_1883_Aki_TMTPro18x_K_F4 144.77 105.81 338880 312420 350690 389960 431010 476820 444380 434810 454770 441610 495680 430400 469500 408850 467580 454010 495970 491410 313690 286550 356750 388510 441570 474580 447600 447250 464310 445660 505140 436990 479960 424900 476990 457680 474230 466370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 505770000 16996 2301 16104 32285;32286 25859;25860 25859 2 9606 Homo sapiens -0.005677727969668922 LPEIEEYYDGNTSSNSR Unmodified 1972.865 0.86502925 2610 B4DW97;Q9BQ39;Q9NTA9;K0J110 DDX50;DKFZp761E0323;mcdrh ATP-dependent RNA helicase DDX50 yes no 0 0 0 3 0 1 57.199 57.231 3 5.9877E-07 17284 20230619_1882_Aki_TMTPro18x_K_F3 120.63 120.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16997 2610 16105 32287 25861 25861 1 9606 Homo sapiens -0.08248866725330117 LPEPTTR Unmodified 812.43922 0.43921744 3912 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog yes yes 0 0 0 4.5 0.5 1 1 38.66 38.726 2 0.029363 8979 20230619_1883_Aki_TMTPro18x_K_F4 95.541 38.078 227630 178550 210940 232160 263180 262330 284080 280960 337280 291700 348950 385320 342270 304540 295330 309780 409110 391250 210300 163930 216580 230440 269660 263440 286800 286050 340840 297100 357370 384010 347510 317080 307470 315760 390210 370810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 196800000 16998 3912 16106 32288;32289 25862 25862 1 9606 Homo sapiens 0.025495403176137188 LPESNQTLLR Unmodified 1169.6404 0.64043645 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;A0A804HI02;B4DE53;I6L959;Q9BTW9-5;A0A804HIC0;A0A804HL21;A0A804HKB9 TBCD Tubulin-specific chaperone D yes no 0 0 0 6.5 0.5 1 1 47.806 47.891 2 0.00041111 12600 20230619_1887_Aki_TMTPro18x_K_F7 129.28 82.083 219210 176570 209750 216860 176620 207730 211550 222730 241710 235850 231490 207800 242590 210580 203870 282350 296950 293300 202610 162000 213400 215630 187170 211080 212320 226830 244150 236810 238280 212540 245550 220970 213560 282920 283200 278470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204180000 16999 1722 16107 32290;32291 25863 25863 1 9606 Homo sapiens 0.062401845634894926 LPETNLFETEETRK Unmodified 1705.8523 0.85227972 3911 Q15046;Q15046-2;Q6ZTI3 KARS Lysine--tRNA ligase yes no 0 0 1 4.5 1.12 1 1 1 1 52.922 52.979 3 8.6019E-17 15015 20230619_1885_Aki_TMTPro18x_K_F5 182.35 159.21 705960 588290 635410 711140 644930 804850 683120 734290 783740 846690 879830 858000 873430 759500 835510 970310 845800 879760 652320 539590 652010 709260 671200 804950 690050 757880 796930 849910 897800 867460 889860 797620 851620 966270 809400 836440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1484599999.9999998 17000 3911 16108 32292;32293;32294;32295 25864;25865;25866 25866 3 9606 Homo sapiens 0.027587666731051286 LPETVHTAVR Unmodified 1121.6193 0.61930707 434 E9PFH4;B2R6H7;A0A024R794;Q9Y5L0-3;Q9Y5L0;B3KMX1;B3KM69;C9J7E5;Q9Y5L0-5;Q9Y5L0-1 TNPO3 Transportin-3 yes no 0 0 0 6.5 0.5 1 1 38.132 38.201 3 5.6199E-06 8521 20230619_1887_Aki_TMTPro18x_K_F7 160.53 131.8 97495 73941 98695 104330 108240 108170 120010 110190 117480 162470 175260 197500 201890 159720 134650 202490 196760 197520 90119 67957 100330 102890 111850 109160 120270 113870 122320 162350 178330 197570 201950 168270 141900 202320 187660 187660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168840000 17001 434 16109 32296;32297 25867;25868 25868 2 9606 Homo sapiens 0.06336219254603748 LPEVEVPQHL Unmodified 1159.6237 0.62372375 2110 Q53GX6;A8K7Q1;Q02818;B4DZX0;Q96BA4;B3KUR6 NUCB1 Nucleobindin-1 yes no 0 0 0 3.5 0.5 1 1 57.356 57.375 2 0.0020332 17348 20230619_1882_Aki_TMTPro18x_K_F3 98.033 78.246 30984 29900 29410 26955 28014 37081 33285 35508 40161 33161 35696 33571 38801 32366 36034 32359 33147 37887 28670 27342 29980 27630 29411 36695 33473 36300 40324 33668 36958 34028 39360 33441 36512 32843 31775 35909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82996000 17002 2110 16110 32298;32299 25869 25869 1 9606 Homo sapiens 0.05029683677548746 LPEVQQATK Unmodified 1012.5553 0.55530983 1505 Q13428-4;A0A3B3IS06;Q13428-3;Q13428;Q13428-7;Q13428-6;Q13428-8;Q13428-2;E7ETY2;A0A6I8PRA0;B4DRA2 TCOF1 Treacle protein yes no 0 0 0 7 0 1 46.504 46.592 2 0.0011263 12025 20230619_1887_Aki_TMTPro18x_K_F7 118.71 61.431 45831 36189 37968 43910 47718 53194 48280 49363 67015 50951 53765 53534 59035 47751 48805 52530 66822 62219 42309 33202 39408 43826 48866 52997 49207 50728 66641 51527 56000 54034 59607 49730 50818 53243 63728 59010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27542000 17003 1505 16111 32300 25870 25870 1 9606 Homo sapiens 0.04953439097664614 LPFAAAQIGNSFR Unmodified 1390.7357 0.73573382 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4;A0A6Q8PHI7;H7C443;A0A6Q8PFZ6;A0A6Q8PF45;A0A6Q8PH49;Q75MN1 GARS Glycine--tRNA ligase yes no 0 0 0 5.5 0.5 1 1 61.717 61.769 3 3.3887999999999997E-22 18894 20230619_1886_Aki_TMTPro18x_K_F6 194.39 170.54 28078 23986 23419 25872 22853 30276 28950 26826 32266 29122 30084 39404 35155 26010 34590 37785 36297 40576 25934 21975 24192 26036 23999 30198 28932 27717 32591 29620 31263 39059 35669 27907 35296 37924 34742 38494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193840000 17004 3576 16112 32301;32302 25871 25871 1 9606 Homo sapiens 0.05599537754483208 LPFPIIDDR Unmodified 1084.5917 0.59169534 3527 V9HWC7;P30041;A4UCS6 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 0 6.5 0.5 1 1 62.433 62.477 2 0.00015187 19201 20230619_1886_Aki_TMTPro18x_K_F6 147.19 114.37 4571100 3810400 4212800 4753100 4620700 5754400 5125100 5536100 5897300 5669400 5619800 6258900 5954600 5411300 5897700 6837800 6403900 7306300 4224600 3496100 4319900 4735300 4787500 5735700 5162900 5672400 5954000 5740400 5799100 6298300 6067200 5684200 6031700 6871500 6128600 6931300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 9948700000 17005 3527 16113 32303;32304 25872;25873;25874 25872 3 9606 Homo sapiens 0.05278315994360128 LPFTVVHER Unmodified 1096.6029 0.60292873 1874 Q96S52;A0A994J5E6;Q8NBL9;B2RBB2;A0A994J801;A0A994J555;A0A994J5S5;A0A994J550;A0A994J7M9;A0A994J810;A0A994J7M6;A0A994J5F0;A0A994J5S0;A0A994J5S7;A0A994J804;A0A994J808;Q96IR5;A0A994J5F5;Q96S52-2;J3QL67;A0A994J5E2;A0A994J7M3 PIGS GPI transamidase component PIG-S yes no 0 0 0 1 0 1 47.229 47.229 3 2.0258E-06 13218 20230619_1880_Aki_TMTPro18x_K_F1 179.51 121.55 12167 9919.1 11668 9972 12138 11810 11003 14207 14525 12103 11802 14015 13194 11698 12203 17700 12356 18688 11246 9083.7 11887 10105 12535 11866 11280 14279 14489 12401 12313 14069 13380 12459 12468 17725 11864 17716 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29673000 17006 1874 16114 32305 25875 25875 1 9606 Homo sapiens 0.058491380885243416 LPGELEPVQATQNK Unmodified 1522.7991 0.79912193 3162;3172 K7EL20;O75821;Q6IAM0;K7EP16;K7ER90 EIF3G Eukaryotic translation initiation factor 3 subunit G no no 0 0 0 5.5 0.5 1 1 52.738 52.813 3 4.4587E-08 15156 20230619_1886_Aki_TMTPro18x_K_F6 145.06 118.39 44719 42412 43316 41883 43771 47886 43648 43581 56074 67533 62791 82714 85732 72520 51024 96206 96560 124970 41381 38814 44112 42452 45447 47903 44419 45462 56784 67418 65201 82897 85170 76441 55266 97739 92145 118290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152810000 17007 3162;3172 16115 32306;32307 25876 25876 1 9606 Homo sapiens 0.058634336810882814 LPGGELNPGEDEVEGLKR Unmodified 1907.9589 0.95887005 416 B2R6U8;A0A024R6W2;O43809;H3BND3;H3BV41 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 1 4 0.816 2 2 2 52.839 52.89 3;4 8.8689E-19 15278 20230619_1883_Aki_TMTPro18x_K_F4 182.63 167.93 587730 507520 618510 613250 599290 665100 680720 644290 621410 725080 688570 574180 728980 548490 766790 615270 551460 546310 543880 465450 625460 611460 625820 668210 680000 661810 639740 723650 704630 589030 743630 570560 766340 613970 529680 519640 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1875499999.9999998 17008 416 16116 32308;32309;32310;32311;32312;32313 25877;25878;25879 25878 3 9606 Homo sapiens 0.04120897167581461 LPGGPTLTFQVK Unmodified 1256.7129 0.71287311 973 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55-2;Q9NQ55;Q9NQ55-3;A8MV53;C9JHF7;C9J3W3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog yes no 0 0 0 4 0 1 60.758 60.76 3 0.023395 18674 20230619_1883_Aki_TMTPro18x_K_F4 57.225 39.84 78753 64178 69081 81239 66746 93953 85935 81857 115750 81037 79687 81366 83145 67074 87290 96502 95823 97338 72745 58898 71052 80780 70262 93702 86405 84456 114680 82037 83634 82135 84956 71239 89212 96512 91611 92438 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51676000 17009 973 16117 32314 25880 25880 1 9606 Homo sapiens 0.09478518637001798 LPGGVQNFPQFSALR Unmodified 1629.8627 0.86272524 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;Q5H962;B4DGF6 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 5 0 1 61.847 61.895 2 5.3065E-05 18763 20230619_1885_Aki_TMTPro18x_K_F5 109.24 85.807 84648 74528 75329 76629 79547 109630 96560 82296 109670 48131 47855 42309 48018 37813 63973 48907 41928 43609 78237 68245 77409 77665 82952 107690 96688 85082 108310 50446 52027 43122 49747 39753 63473 48725 40341 41470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54894000 17010 594 16118 32315 25881;25882 25882 2 9606 Homo sapiens 0.07298838908832295 LPGLPEGAFR Unmodified 1055.5764 0.57637963 1254 A0A146E5L3;O14498;H0YN67;H0YL90 ISLR Immunoglobulin superfamily containing leucine-rich repeat protein yes no 0 0 0 4.5 3.5 1 1 57.155 57.181 2 0.0021365 17306 20230619_1880_Aki_TMTPro18x_K_F1 96.936 62.683 70228 58303 69098 72906 113220 151790 123660 123820 174900 149990 139920 170810 180790 155780 183530 180960 164200 203980 64935 53496 71049 73427 114690 146760 125540 129010 173890 150920 147250 171860 183360 162540 185510 182740 157570 193350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99144000 17011 1254 16119 32316;32317 25883;25884 25883 2 9606 Homo sapiens 0.0508144919717779 LPGPTGSVVSTGTSFSSSSPGLASAGAAEGK Unmodified 2763.3563 0.35628226 4167 Q7Z434-4;Q7Z434 MAVS Mitochondrial antiviral-signaling protein yes no 0 0 0 2 0 1 58.638 58.652 4 2.7757E-10 18091 20230619_1881_Aki_TMTPro18x_K_F2 111.43 97.999 12781 10920 14255 13359 10101 12922 13295 13749 14329 12917 15243 14221 13889 11266 15893 11592 13149 16962 11833 10017 14292 13292 10915 13115 13262 13969 14564 13137 15536 14278 14304 11747 15952 11957 12634 16039 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 411690000 17012 4167 16120 32318 25885 25885 1 9606 Homo sapiens 0.04513837006061294 LPGYLSGK Unmodified 833.4647 0.46470391 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A0U1RQJ2;A0A494C073;A0A494C1U5;H0YC65;Q9BSP9;Q86T18 DST Dystonin yes no 0 0 0 3 0 1 52.663 52.722 2 0.071306 15347 20230619_1882_Aki_TMTPro18x_K_F3 75.738 23.055 81580 60716 71293 86396 79667 90176 79439 84127 97979 71831 78281 87221 76193 60580 80301 83005 93398 67580 75313 55812 73491 85143 82155 90728 80689 86051 97902 73751 81228 86939 78026 64528 82310 82194 89057 64446 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35762000 17013 1693 16121 32319 25886 25886 1 9606 Homo sapiens 0.04131014840049829 LPHFQLSR Unmodified 996.5505 0.55049923 595 D6RAA6;A6QKW0;A0A024R9W7;P57088;H0Y8N0 TMEM33;SHINC3 Transmembrane protein 33 yes no 0 0 0 4 0.816 1 1 1 46.755 46.815 3 2.4319E-05 12456 20230619_1883_Aki_TMTPro18x_K_F4 182.39 135.96 101620 91902 91661 114700 123290 134060 131300 127010 156700 83080 77403 79980 92785 71848 93897 98341 102220 91567 93952 84298 94575 114180 125800 133910 132600 129080 154840 86368 83872 81130 94272 75812 95938 98005 97646 87082 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 299890000 17014 595 16122 32320;32321;32322 25887;25888 25887 2 9606 Homo sapiens 0.052085997455719735 LPIGDVATQYFADR Unmodified 1564.7886 0.78855725 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 7.5 0.5 2 2 62.425 62.455 2;3 9.0789E-22 18833 20230619_1888_Aki_TMTPro18x_K_F8 272.1 237.21 511330 388230 455440 536270 384890 557040 515570 484130 588040 653010 624840 637040 705150 599890 568150 728950 640310 764960 472180 356720 466920 529410 410120 559610 514530 504320 596820 650460 642840 646150 710630 626980 585070 731970 612810 725730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2599200000 17015 4005 16123 32323;32324;32325;32326 25889;25890;25891 25891 3 9606 Homo sapiens 0.028754510266708166 LPIGDVATQYFADRDMFCAGR Oxidation (M) 2418.1097 0.10965016 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 1 1 1 0 1 61.829 61.829 3 0.0001456 19216 20230619_1880_Aki_TMTPro18x_K_F1 74.324 68.202 68915 64379 64024 66813 74246 58103 62319 66167 59060 68477 70554 63174 69914 51854 69836 81281 73891 68223 63743 58945 65571 67211 75797 59705 63480 67104 60884 68873 71786 64056 71319 55439 71302 80439 70620 64957 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68464000 17016 4005 16124 32327 25892 25892 2638 1 9606 Homo sapiens -0.04268027507532679 LPIGDVATQYFADRDMFCAGR Unmodified 2402.1147 0.11473554 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 1 1.5 0.5 1 1 62.814 62.819 3 6.7834E-30 19623 20230619_1880_Aki_TMTPro18x_K_F1 203.81 192.83 127230 129030 126310 116780 99364 105370 110270 119210 101140 139410 120240 104700 134890 107110 133000 161240 141660 123380 117820 117980 127890 118960 105560 107870 110410 121340 104540 138660 123040 108070 137070 113280 135900 158960 135330 117660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253900000 17017 4005 16124 32328;32329 25893;25894 25893 2 9606 Homo sapiens -0.030237236449465854 LPIIGVVENMSGFICPK Unmodified 1872.9842 0.98416229 3641 P53384-2;P53384;I3L518;I3L3A0 NUBP1 Cytosolic Fe-S cluster assembly factor NUBP1 yes no 0 0 0 5 0 1 66.947 66.99 3 9.735E-05 20949 20230619_1885_Aki_TMTPro18x_K_F5 91.207 79.767 7044.1 6071.6 6254.7 5139.8 8509.2 7132.4 8751.3 7978.5 10861 8473.1 8052.4 9819.2 11876 7375.4 7935.3 10721 9305.2 12681 6509.6 5551.9 6445.1 5303.7 8653 7091.7 8868 8103.9 10833 8580.4 8569.4 9821.8 11795 7881 8230.3 10819 8913.3 12011 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4501100 17018 3641 16125 32330 25895;25896 25895 2 9606 Homo sapiens 0.08258957164821368 LPIPESQVITINPELPVEEAAEDYAK Unmodified 2864.4695 0.4695211 1052 A0A0K0K1K7;O95336;M0R261;M0R0U3;M0R1L2 PGLS 6-phosphogluconolactonase yes no 0 0 0 5 0 1 64.85 64.895 4 4.9831E-20 20110 20230619_1885_Aki_TMTPro18x_K_F5 147.26 137.93 19635 13583 17277 17725 15092 16157 18693 17411 18092 17993 22333 23032 21490 25033 21696 25884 23842 28337 18120 12478 17715 17542 15942 16486 18628 17727 18626 18310 22688 23235 22016 25770 22202 26124 22822 26872 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75332000 17019 1052 16126 32331 25897 25897 1 9606 Homo sapiens 0.11186512399308413 LPIQEAFLGAMR Unmodified 1344.7224 0.72239194 2804 CON__Q9N2I2 yes yes 0 0 0 3.5 0.5 1 1 63.665 63.685 2 0.0067671 19907 20230619_1882_Aki_TMTPro18x_K_F3 78.488 41.467 + 27051 23906 28474 31393 26931 36819 31792 27816 38837 55164 72691 87405 59969 55679 90837 67022 62151 83191 25037 21941 28812 31144 28287 36598 32011 29800 40530 55225 72589 86121 63057 59052 90122 68150 59889 78767 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111730000 17020 2804 16127 32332;32333 25898 25898 1 0.0638196365089243 LPISVDSPPAAADSNTTAASNVDK Unmodified 2340.1445 0.14449857 2857 Q3V6T2;D6W5D1;Q3V6T2-2;A0A2U3TZV9;A0A2R8Y7B1;Q3V6T2-3;Q3V6T2-4;Q3V6T2-5;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y885;A0A2R8YDS8;A0A2R8Y7D4;H0Y470;Q9ULK8;A0A2R8Y5D7;B4DSN0;B3KW94;H0Y7K3;A0A2R8Y4C6 CCDC88A;KIAA1212 Girdin yes no 0 0 0 5 0 1 55.87 55.934 3 0.025663 16265 20230619_1885_Aki_TMTPro18x_K_F5 45.395 35.056 4861.1 3739.1 5404.2 5350.9 6459.6 6481 6488.2 5215.1 5947.4 6083.6 5725.5 6370.9 7259.3 5714.8 7048.4 9421.8 7196.5 6509.6 4497.4 3436.9 5459.9 5284.1 6617.2 6439.4 6521.1 5442.4 6086.3 6111.8 5959.3 6437.7 7348 6109.4 7192.3 9238.3 6879.3 6216.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19889000 17021 2857 16128 32334 25899 25899 1 9606 Homo sapiens 0.02803210105821563 LPLATIVK Unmodified 853.56369 0.56368968 317 A0A024R534;O94776;O94776-2 MTA2 Metastasis-associated protein MTA2 yes no 0 0 0 4 0 1 59.828 59.831 2 7.0805E-06 18253 20230619_1883_Aki_TMTPro18x_K_F4 150.84 91.856 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17022 317 16129 32335 25900 25900 1 9606 Homo sapiens 0.13105037804950825 LPLCSLPGEPGNGPDQQLQR Unmodified 2175.0743 0.074250936 4355 Q96GX2 ATXN7L3B Putative ataxin-7-like protein 3B yes yes 0 0 0 6.5 0.5 1 1 57.787 57.848 3 3.3515E-16 16930 20230619_1887_Aki_TMTPro18x_K_F7 157.11 143.21 41176 34916 35784 39683 42494 46389 44360 45781 57708 46386 53898 50793 57414 48864 48410 55212 50188 54854 38042 32005 36925 39780 43688 46394 45026 46820 57842 47010 55600 51330 58055 50802 49522 55346 48035 52088 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76403000 17023 4355 16130 32336;32337 25901;25902 25901 2 9606 Homo sapiens 0.03371678026951486 LPLDINPVVHPHGHIFK Unmodified 1932.0734 0.07338672 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 3 0 1 52.367 52.426 5 7.7682E-07 15247 20230619_1882_Aki_TMTPro18x_K_F3 118.33 97.034 33739 24942 32955 39604 32949 42675 36724 35388 51660 45475 47775 68108 66505 64473 43070 83644 83810 106140 31173 22959 33591 38795 34405 42720 37266 36952 51630 46142 50128 67986 66278 67626 46688 84858 79950 100490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202020000 17024 307 16131 32338 25903 25903 1 9606 Homo sapiens 0.1446329623083784 LPLDVLGR Unmodified 881.53345 0.53345218 449 A5PKY0;A0A024R7G6;M0R165;A8K5P4;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2;B4DQX5;B4DME4 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 1.5 0.5 1 1 59.829 59.835 2 0.007278 18386 20230619_1880_Aki_TMTPro18x_K_F1 108.09 28.636 109130 89237 100350 109760 86782 101260 106600 106750 102010 134840 129280 137870 147530 121560 129210 151090 149580 156330 100840 81870 102520 109060 91778 103170 106260 109450 105430 134780 132220 139250 149100 127520 132960 151580 142970 148400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84026000 17025 449 16132 32339;32340 25904 25904 1 9606 Homo sapiens 0.08794679139748496 LPLFPEPLHVFAPR Unmodified 1631.9188 0.91878356 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;B3KVA0;K7ENW7 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 4.5 0.5 1 1 62.807 62.833 3 1.4952E-08 19214 20230619_1885_Aki_TMTPro18x_K_F5 146.79 103.51 105910 84501 96095 107970 79406 94307 98165 97004 106030 125490 110680 96268 129530 109870 99506 125330 118430 113760 97840 77563 98255 106930 84379 96456 98176 99694 107890 124390 114040 99558 130180 113730 102900 124980 113100 108190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 413890000 17026 442 16133 32341;32342 25905;25906 25906 2 9606 Homo sapiens 0.12810091816299973 LPLISGFYK Unmodified 1036.5957 0.59571809 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5 0 1 63.131 63.178 2 0.0010156 19370 20230619_1885_Aki_TMTPro18x_K_F5 136.75 83.07 187340 135160 169130 187890 168290 204840 208080 206480 220420 194600 166460 146300 179960 156470 181520 201770 197280 171480 172960 124230 173470 185590 176110 205780 207840 210480 221710 195900 173840 151190 183390 163460 185530 200290 188420 163290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73599000 17027 3758 16134 32343 25907 25907 1 9606 Homo sapiens 0.07888405488074568 LPLLPHEVR Unmodified 1072.6393 0.63931423 3263 O43681;B4DEE5 ASNA1 ATPase ASNA1 yes no 0 0 0 4.5 3.5 1 1 48.059 48.088 3 0.00019982 13561 20230619_1880_Aki_TMTPro18x_K_F1 126.24 106.48 84421 72583 77842 94254 75141 86138 86722 85323 106210 105530 102700 105030 103650 92704 107010 114680 97616 114020 78037 66616 79683 93273 78641 87695 87377 87796 106980 105570 105610 106220 105930 97179 108290 114840 93602 108250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 741450000 17028 3263 16135 32344;32345 25908;25909 25908 2 9606 Homo sapiens 0.10590014985223206 LPLMECVQVTK Unmodified 1316.6832 0.68322924 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162;Q7KYX9;H0YHB8 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 1.5 0.5 1 1 61.121 61.127 3 0.00032456 18938 20230619_1880_Aki_TMTPro18x_K_F1 100.55 55.297 140190 128850 153810 135990 117610 152970 127500 138920 162230 154790 163810 186910 187490 154430 191890 194690 177690 212810 129840 118000 154460 137080 125500 153080 129190 143310 163390 156580 169230 187160 190750 162520 194290 196000 170390 201810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 323300000 17029 116 16136 32346;32347 25910;25911 25910 2 9606 Homo sapiens 0.03755495304994838 LPLPAFR Unmodified 812.49086 0.49085908 3969 Q3YEC7;Q3YEC7-2;B3KXX7;Q9NWD6;Q9NW45 RABL6 Rab-like protein 6 yes no 0 0 0 4.5 0.5 1 1 57.718 57.749 2 0.075749 16971 20230619_1885_Aki_TMTPro18x_K_F5 74.597 36.226 81926 64083 73196 82616 65849 95062 91128 82388 102310 84293 76855 88079 82822 68457 91422 82696 92346 75666 75667 58831 75068 82048 69859 94822 90721 85128 102540 85240 80429 88522 84751 72008 92806 82522 88232 72004 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87881000 17030 3969 16137 32348;32349 25912 25912 1 9606 Homo sapiens 0.07711328802179196 LPLPEPWR Unmodified 1006.56 0.56000128 4544 Q9HB07;F8VR84;Q8WYI2;F8VQQ3;Q96CT6;H3BPH3 C12orf10;MST024 UPF0160 protein MYG1, mitochondrial yes no 0 0 0 1.5 0.5 1 1 60.539 60.545 2 0.029979 18751 20230619_1880_Aki_TMTPro18x_K_F1 80.098 29.559 118280 98166 106080 120290 108710 127710 137670 136980 155180 134990 122730 127630 143610 113970 125980 160090 139100 140360 109290 90054 108930 119770 113580 128770 137630 139230 155790 136330 128400 129490 145050 120470 129330 158930 132980 133520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132660000 17031 4544 16138 32350;32351 25913 25913 1 9606 Homo sapiens 0.056983680310850104 LPLPYGFSAMQGWR Oxidation (M) 1637.8024 0.80243317 2230 Q6IAU5;B2R665;O15355 PPM1G Protein phosphatase 1G yes no 0 1 0 6 0 1 62.624 62.675 3 0.00014591 19314 20230619_1886_Aki_TMTPro18x_K_F6 94.747 83.164 73682 61862 73568 77242 68808 84539 78219 77253 95265 63475 67617 64993 68979 63715 74168 66626 70144 73822 68142 56759 74703 76837 72191 84739 78844 79075 94876 65011 70740 65894 70646 65912 75064 67340 67178 70027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113880000 17032 2230 16139 32352 25914 25914 1390 1 9606 Homo sapiens 0.009044052540730263 LPLPYGFSAMQGWR Unmodified 1621.8075 0.80751855 2230 Q6IAU5;B2R665;O15355 PPM1G Protein phosphatase 1G yes no 0 0 0 7 0 1 64.047 64.077 3 1.7717E-37 19704 20230619_1887_Aki_TMTPro18x_K_F7 232.17 214.37 28507 25084 26012 31683 19964 32843 26441 29018 31019 20729 14453 13373 13312 10500 22142 15931 17784 12511 26353 23013 26587 31458 21487 33002 26430 29687 30657 21187 15572 13816 14044 11219 22083 15751 17021 11939 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83010000 17033 2230 16139 32353 25915 25915 1 9606 Homo sapiens 0.021487091167045946 LPLQDVYK Unmodified 974.54368 0.54368251 1560;3997;1378 Q05639;A0A2U3TZH3;Q59GP5;P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;Q9H2I7;A0A087WV01;Q504Z0;Q53HR1;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q6P082;A0A4D5RAB8;A9X7H1;Q53GE9 EEF1A2;EEF1A1;EEF1A1P5;EEF1A1L14 Elongation factor 1-alpha 2;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 4.5 3.04 1 1 1 1 56.257 56.291 2;3 0.0014032 16939 20230619_1880_Aki_TMTPro18x_K_F1 114.89 73.446 5258200 4251700 4319300 4875500 4147200 10020000 1167200 6128300 704170 2195400 2251900 845840 1140800 743600 3739300 986890 882270 335390 4854500 3898200 4469000 4935700 4288900 9636000 1357100 6405900 686200 2384200 2184400 923350 1317300 784620 3583700 960640 867990 327470 3 3 3 3 3 3 3 3 2 3 3 3 3 3 3 3 3 3 15583000000 17034 1378;1560;3997 16140 32354;32355;32356;32357 25916;25917;25918 25916 3 9606 Homo sapiens 0.05539242074326012 LPLQLDDAVRPEAEGEEEGR Unmodified 2222.0815 0.081504383 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53R85;C9J7S3;C9JLC1 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 1 2 0.816 1 1 1 54.247 54.271 3 2.3789E-37 16088 20230619_1880_Aki_TMTPro18x_K_F1 240.31 223.42 388060 289660 351510 426550 342460 418740 404530 405270 426110 472470 463420 501240 556260 443880 480150 581610 494160 568020 358350 266370 360490 419170 358470 423480 405050 416850 434720 474660 478050 505640 560930 467160 490950 581170 473180 539390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 714790000 17035 1207 16141 32358;32359;32360 25919;25920;25921 25919 3 9606 Homo sapiens 0.019346891084296658 LPLQLDDAVRPEAEGEEEGRATVNQDTR Unmodified 3107.5119 0.51194805 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53R85;C9J7S3;C9JLC1 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 2 2 0 1 51.164 51.209 4 1.382E-13 14974 20230619_1881_Aki_TMTPro18x_K_F2 122.36 113.15 35438 38293 38505 30480 34665 34919 37977 39401 35639 41660 40851 41172 45993 34142 44679 51302 43574 43233 32858 34975 38748 31552 36350 35126 38057 39987 36687 41940 41908 41603 46677 36368 45432 50806 41699 41149 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119770000 17036 1207 16142 32361 25922 25922 1 9606 Homo sapiens 0.04249255789545714 LPLTPVFEGLAFK Unmodified 1430.8173 0.81733818 1809 A0A8V8NBT1;Q12769;G3V198 NUP160 Nuclear pore complex protein Nup160 yes no 0 0 0 3.5 0.5 1 1 65.327 65.349 3 0.00035204 20557 20230619_1883_Aki_TMTPro18x_K_F4 93.959 77.735 21816 18110 20602 19991 15697 21642 21827 22649 24788 26292 23306 26046 31480 19323 24012 31858 29262 28100 20166 16597 20958 20069 16896 21777 21752 23161 25046 26358 24354 26225 31470 20846 24880 31576 27939 26734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39989000 17037 1809 16143 32362;32363 25923 25923 1 9606 Homo sapiens 0.11916220393732146 LPLVTPHTQCR Unmodified 1320.6972 0.69723982 3706 Q53XL8;Q53HB3;P62191 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 3.5 0.5 1 1 42.395 42.45 3 2.0414E-18 10561 20230619_1883_Aki_TMTPro18x_K_F4 205.53 184.63 120500 104750 115260 127020 128100 129340 136430 131310 161790 129490 129510 113690 139260 106090 119650 122360 217610 122500 111430 96068 117780 126490 132210 130710 137820 133980 162040 130550 134700 115930 140940 110630 127370 122710 206600 116700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 249080000 17038 3706 16144 32364;32365 25924;25925 25925 2 9606 Homo sapiens 0.04971908848324347 LPLVVEDFVK Unmodified 1157.6696 0.66961131 2674 H0YER3;B7Z1J9;B7ZKW3;B7ZKW4;Q8NB37-3;Q8NB37;H0YE25;H0YF25;Q8NB37-2 PDDC1 Parkinson disease 7 domain-containing protein 1 yes no 0 0 0 7.5 0.5 1 1 64.257 64.282 3 0.017825 19683 20230619_1888_Aki_TMTPro18x_K_F8 52.579 29.749 12963 12306 12220 13747 13128 13233 14045 14149 14700 18528 14577 17560 19477 15299 16441 19315 18535 18558 11993 11274 12497 13762 13578 13450 14131 14508 14966 18451 15198 17779 19572 16074 16903 19295 17714 17634 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33321000 17039 2674 16145 32366;32367 25926 25926 1 9606 Homo sapiens 0.09708328859733228 LPMFLHCR Unmodified 1072.531 0.53102611 2876 G5EA19;U3KQS5;E5RG17;Q6P1N9;H0YBX2;E5RGF2;A0A0D9SGD3;Q6P1N9-2;E5RG62;E5RK70 TATDN1 Putative deoxyribonuclease TATDN1 yes no 0 0 0 5.5 0.5 1 1 50.319 50.395 3 2.0586E-05 14079 20230619_1886_Aki_TMTPro18x_K_F6 162.51 136.58 21319 17886 17044 15999 22140 31600 25481 18927 38082 11066 7091.2 9517.2 9851.3 8639.5 11024 9895.1 11085 9805.9 19683 16364 17754 16521 22774 30469 25834 20010 36765 11632 8875.3 9696.5 10042 9008 11185 9923.3 10597 9319.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23456000 17040 2876 16146 32368;32369 25927 25927 1 9606 Homo sapiens -0.0023381586122468434 LPNFGFVVFDDSEPVQK Unmodified 1936.9571 0.95707914 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;A0A7I2YQN9;A0A7I2V5M7;B7Z8K4;Q6ZP53;A0A7I2YQH0;A0A7I2YQF2;A0A7I2V494;A0A7I2V5H1;A0A7I2V565 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 7.5 0.5 1 1 64.766 64.79 3 8.4397E-39 19995 20230619_1887_Aki_TMTPro18x_K_F7 262.42 239.28 528460 425550 522260 539760 441470 558560 534180 530570 607870 667570 599820 607620 675720 623160 587980 767180 612840 687000 488560 390570 530010 535980 468070 562590 535700 547650 615290 665530 619160 620200 683400 649650 601850 763650 586630 653090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 800200000 17041 3846 16147 32370;32371 25928;25929 25928 2 9606 Homo sapiens 0.026078881496687245 LPNFGFVVFDDSEPVQR Unmodified 1964.9632 0.96322715 755 Q9UN86;Q9UN86-2;A0A024RDE5;A0A024RDB2;A8K6V7;A0A7I2YQD9;A0A7I2V3P9;A0A7I2V647;A0A7I2V382 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 0 6.5 0.5 1 1 64.654 64.69 3 9.107299999999999E-19 19959 20230619_1887_Aki_TMTPro18x_K_F7 187.01 173.89 92527 62731 89263 84233 65636 82360 92394 83320 94403 98388 90573 98162 109840 99395 102780 122150 113460 111660 85440 57650 90577 83292 70832 83415 91685 85495 95955 98628 94029 99718 111220 103650 105330 121750 108440 106170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 834940000 17042 755 16148 32372;32373 25930;25931 25931 2 9606 Homo sapiens 0.0193440638120137 LPNFGSHVLTPAEMEAFK Oxidation (M) 2002.9822 0.98224803 495 Q14C86-6;Q14C86;Q14C86-2;Q14C86-5;Q14C86-4;A0A024R8A2;A0A024R862;F8W9S7;Q14C86-3;A0A024R875;B4DK42;C9IZ08;B3KN67;H0Y7I9;H0Y4E7 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 0 1 0 8 0 1 58.289 58.335 3 0.012235 17159 20230619_1888_Aki_TMTPro18x_K_F8 53.453 37.861 26547 21903 20758 26695 23837 26641 23981 26945 29816 27482 32395 29032 30450 26704 32966 35454 30090 35509 24505 20092 21649 26560 24548 26951 24362 27517 30135 27796 33015 29357 31259 28082 33336 35481 28855 33706 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100430000 17043 495 16149 32374 25932 25932 303 1 9606 Homo sapiens 0.020876196805602376 LPNFLSVEPR Unmodified 1170.6397 0.63970816 2553 B4DNM0;Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 yes no 0 0 0 2 0 1 61.397 61.408 2 0.0081931 19206 20230619_1881_Aki_TMTPro18x_K_F2 83.862 47.337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17044 2553 16150 32375 25933 25933 1 9606 Homo sapiens 0.061213899144149764 LPNLTHLNLSGNK Unmodified 1419.7834 0.78341229 3990 Q53F35;Q92688-2;Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B yes no 0 0 0 4 0 1 54.374 54.389 3 1.3122E-05 15907 20230619_1883_Aki_TMTPro18x_K_F4 119.87 84.11 416170 324750 397810 413390 384090 440130 417760 455210 494900 411350 340570 328500 349150 297430 410650 391190 359060 327180 384570 298100 405520 410600 401220 443290 421750 462680 493630 415650 357170 336260 359030 312770 413530 388120 343820 311560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14394000000 17045 3990 16151 32376 25934 25934 1 9606 Homo sapiens 0.09031191954704809 LPPNTNDEVDEDPTGNK Unmodified 1853.8279 0.82791546 3931 Q15393;A8K6V3;B3KQH1;B3KM77;Q15393-3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 1.5 0.5 1 1 47 47 3 0.0014505 13040 20230619_1881_Aki_TMTPro18x_K_F2 73.983 63.039 23130 20282 18587 20669 20005 19907 21993 20187 24843 26800 24853 23871 26892 24025 27583 26337 27950 31737 21362 18571 19290 20843 20717 20214 22145 20786 25167 26643 25589 24369 27422 24910 28051 26735 26765 30073 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21101000 17046 3931 16152 32377;32378 25935;25936 25936 2 9606 Homo sapiens -0.06484538271092788 LPPPPDIK Unmodified 875.51165 0.5116541 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;C9JAJ4 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 0 7 0 1 51.615 51.689 3 0.011312 14337 20230619_1887_Aki_TMTPro18x_K_F7 81.594 20.622 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17047 1029 16153 32379 25937 25937 1 9606 Homo sapiens 0.06891874391180863 LPPQDFLDR Unmodified 1099.5662 0.56620887 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 4.5 0.5 1 1 53.719 53.761 2 0.060753 15735 20230619_1883_Aki_TMTPro18x_K_F4 65.474 10.012 128530 115960 131680 133070 139960 170900 152620 147080 186540 149840 163120 157730 163680 154550 174940 184120 170140 199820 118950 106280 133660 133490 145220 169370 154180 151970 187060 151650 168500 159760 167690 161050 177490 185400 163040 189520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 130780000 17048 673 16154 32380;32381 25938 25938 1 9606 Homo sapiens 0.02040841471944077 LPPVLANLMGSMGAGK Unmodified 1554.8262 0.82620508 3960 Q96QC0;Q2L6I0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes no 0 0 0 7 0 1 65.904 65.929 3 3.1986E-08 20494 20230619_1887_Aki_TMTPro18x_K_F7 131.53 102.19 17424 12742 16865 17447 14278 18466 16955 19628 24213 18219 19727 20204 20860 21470 17341 20853 19419 23955 16096 11709 17146 17246 15143 18610 17172 19927 24056 18563 20498 20467 21115 22060 17832 21131 18591 22703 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77988000 17049 3960 16155 32382 25939 25939 1 9606 Homo sapiens 0.0709850269627168 LPPVLSHPIFDNR Unmodified 1503.8198 0.8197978 884 Q04206;A0A087X0W8;Q04206-3;Q04206-2;B4E082;E9PKH5;Q2TAM5;E9PKV4;Q96CP1;Q96F54;E9PQS6;E9PI38;Q04206-4 RELA Transcription factor p65 yes no 0 0 0 3 0 1 56.635 56.672 3 2.0295E-06 17075 20230619_1882_Aki_TMTPro18x_K_F3 137.95 111.27 37792 23071 31344 38944 33158 37159 38569 38858 36536 38052 37126 35001 36325 30381 38846 29305 34301 34654 34840 21273 32452 37971 34450 37725 38517 39564 37374 38394 38029 35500 37205 31452 39152 29801 32865 32857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 287020000 17050 884 16156 32383 25940 25940 1 9606 Homo sapiens 0.08804068851418378 LPPVLVLHLK Unmodified 1127.7431 0.74305102 1642 A0A7G6J4N4;Q14694;Q14694-3;Q14694-2;Q6P2I0;H3BQP1 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 0 0 0 6 0 2 61.323 61.378 3 2.0991E-05 18684 20230619_1886_Aki_TMTPro18x_K_F6 130.96 28.355 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17051 1642 16157 32384;32385 25941;25942 25941 2 9606 Homo sapiens 0.18428922092880384 LPPVPLLQLEK Unmodified 1245.7697 0.76965971 2992 F8W8C1 TRIM67 yes yes 0 0 0 3 0 1 63.684 63.715 3 0.015408 19976 20230619_1882_Aki_TMTPro18x_K_F3 64.103 45.005 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17052 2992 16158 32386 25943 25943 1 9606 Homo sapiens 0.1566056619358278 LPPYDIPGMVSVVELK Unmodified 1755.9481 0.94809436 1809 A0A8V8NBT1;Q12769;G3V198;E9PR16 NUP160 Nuclear pore complex protein Nup160 yes no 0 0 0 2 0 1 64.658 64.666 3 0.0037292 20677 20230619_1881_Aki_TMTPro18x_K_F2 69.729 46.493 10289 11479 10957 11241 9006.1 12019 10774 13856 10548 12310 10651 12642 16409 11673 11872 10137 14227 12845 9541.1 10499 11050 11393 9568.4 12137 10767 13977 10780 12525 11187 12772 16334 12008 12270 10371 13580 12176 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9227300 17053 1809 16159 32387 25944 25944 1 9606 Homo sapiens 0.10035823259613608 LPPYLIFCIK Unmodified 1262.7097 0.70970199 2722 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;Q53GS9-3;Q53GS9-2;B3KPG7;B3KMG1 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 0 0 0 6 0 1 64.728 64.772 3 0.0028718 20257 20230619_1886_Aki_TMTPro18x_K_F6 78.334 60.603 24528 24131 24475 28152 24032 27507 26063 26653 28583 31644 30789 26858 30718 27027 24048 36804 28955 34025 22709 22114 24882 28093 25060 27849 26250 27422 29084 31565 31448 27515 31045 28389 24916 36631 27692 32328 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25621000 17054 2722 16160 32388 25945 25945 1 9606 Homo sapiens 0.08885552258675489 LPPYSAGDGAELSTPGGK Unmodified 1715.8366 0.83662965 1610 A0A6M8YHF9;A0A6M8YDW2;A0A6M8YDW1;Q8IUF8-4;Q8IUF8;Q8IUF8-3 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA yes no 0 0 0 6 0 1 53.684 53.762 3 7.0227E-05 15509 20230619_1886_Aki_TMTPro18x_K_F6 84.859 65.648 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17055 1610 16161 32389 25946 25946 1 9606 Homo sapiens 0.0073448015600661165 LPQEQSQLPNPSEASTTFPESHLR Unmodified 2692.3093 0.30927249 2829 D3DUZ3 IFI16 yes yes 0 0 0 5.5 0.5 1 1 52.337 52.413 3 9.3976E-27 14758 20230619_1885_Aki_TMTPro18x_K_F5 188.95 180.87 18003 15153 15916 19836 35925 38555 35958 33122 35093 32420 28886 26258 35126 27436 26466 35360 32336 33825 16634 13910 16679 19878 35715 37433 36184 34170 35572 32629 30182 26997 35231 28699 27438 35292 30892 32138 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 286080000 17056 2829 16162 32390;32391 25947;25948;25949 25948 3 9606 Homo sapiens 0.030810222455784242 LPQLHGVR Unmodified 918.53993 0.53993454 168 A0A024R1W6;Q8N138-4;Q8N138;J3KTF9 ORMDL3 ORM1-like protein 3 yes no 0 0 0 3 0 1 40.14 40.196 3 0.0061858 9661 20230619_1882_Aki_TMTPro18x_K_F3 87.323 31.646 35263 27377 34735 28408 39365 44339 39154 41949 60161 30039 33379 34235 39268 30441 35285 32551 35920 34013 32592 25082 35363 28843 40565 43573 40123 42675 58935 31188 35766 34446 39692 31651 35968 32773 34349 32297 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13975000 17057 168 16163 32392 25950 25950 1 9606 Homo sapiens 0.07740617091133117 LPQPPEGQTYNN Unmodified 1356.631 0.63099397 1895 A0M8W4;Q15819;G3V113 UBE2V2 Ubiquitin-conjugating enzyme E2 variant 2 yes no 0 0 0 4 0.816 1 1 1 50.195 50.25 2 0.0094838 14265 20230619_1882_Aki_TMTPro18x_K_F3 79.16 63.589 29845 23678 27824 27352 27673 34330 28176 29144 37988 33737 37946 34198 36652 35140 30848 35124 40288 36101 27576 21713 28429 27418 28823 34061 28694 30248 38126 33887 38841 34741 37208 36201 32013 35346 38427 34294 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 342740000 17058 1895 16164 32393;32394;32395 25951;25952 25951 2 9606 Homo sapiens -0.033056285127031515 LPQPPSHR Unmodified 930.50355 0.50354903 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 1.5 0.5 1 1 34.102 34.131 3 0.00071498 7545 20230619_1880_Aki_TMTPro18x_K_F1 113.71 47.633 19815 13250 18818 21024 25305 25753 26413 29053 26103 27883 31334 31552 26680 25848 31005 26781 37861 35780 18294 12202 19311 20647 25778 25750 26563 29405 26822 28338 31713 31665 27611 26900 31805 27415 36144 33896 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47874000 17059 3881 16165 32396;32397 25953 25953 1 9606 Homo sapiens 0.035517401944161975 LPQPVQPDPVSHCK Unmodified 1600.8032 0.80316145 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 0 7.5 0.5 1 1 44.663 44.716 3 0.0060348 11357 20230619_1888_Aki_TMTPro18x_K_F8 68.972 49.133 64725 60252 54460 63719 67010 66786 66477 67654 86471 70808 67893 73659 76184 73766 56620 110810 102660 96532 59822 55175 56411 64127 68599 67370 67657 69141 86205 71523 70908 74729 76699 77982 60760 109780 97741 91860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73441000 17060 1647 16166 32398;32399 25954;25955 25955 2 9606 Homo sapiens 0.0267919990315022 LPQTEQELK Unmodified 1084.5764 0.57643921 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;B3KVJ5 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 3.5 0.5 1 1 47.43 47.49 3 0.00082116 12868 20230619_1883_Aki_TMTPro18x_K_F4 102.06 31.961 50199 41240 44908 51014 55686 65626 57928 57440 76001 68453 69092 84310 64174 60669 58956 78191 70246 70446 46379 37837 46268 50895 57124 65052 58817 59538 76114 69084 71092 84012 65463 64227 60775 77810 67104 66992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159850000 17061 4593 16167 32400;32401 25956 25956 1 9606 Homo sapiens 0.03753404406506888 LPRPPPPEMPESLK Unmodified 1586.849 0.84904901 669 Q8NCF7;A0A024RBE8;A0A024RBH9;Q00325-2;Q00325;F8VVM2;Q53HC3;B2RE88 SLC25A3 Phosphate carrier protein, mitochondrial yes no 0 0 1 4.5 3.5 1 1 51.462 51.501 3 6.246E-05 14193 20230619_1888_Aki_TMTPro18x_K_F8 101.53 70.138 114210 90497 114330 125940 128600 149020 121310 124240 147920 116630 120820 132620 134170 120640 122700 147720 148200 182590 105580 83146 116410 124510 132350 148320 123580 128450 148060 118850 125900 133530 136060 126300 126530 149860 141780 172930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 141380000 17062 669 16168 32402;32403 25957;25958 25958 2 9606 Homo sapiens 0.0790984508537349 LPSDVVTAVR Unmodified 1055.5975 0.597509 1194 A0A140VJQ4;P04181;P04181-2;Q59HE2 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes no 0 0 0 7.5 0.5 1 1 50.69 50.768 2 2.7441E-05 13919 20230619_1887_Aki_TMTPro18x_K_F7 156.62 109.62 682270 598870 643090 605640 603960 639450 664050 640720 794790 855540 881980 1072700 896870 730950 1035700 907650 944660 1083200 630860 548320 655640 612070 632090 644570 670330 660380 806130 859370 903150 1066600 921100 774860 1045000 919470 905680 1026400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1080500000 17063 1194 16169 32404;32405 25959;25960 25959 2 9606 Homo sapiens 0.07193414506036788 LPSFELLHK Unmodified 1082.6124 0.61243078 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5 DDB1 DNA damage-binding protein 1 yes no 0 0 0 2.5 0.5 1 1 57.486 57.51 3 0.00019741 17585 20230619_1881_Aki_TMTPro18x_K_F2 126.55 83.829 246880 217920 247270 245300 211670 253820 252960 255880 263090 295920 290570 281590 320290 255150 278730 319090 290610 310750 228400 199710 250620 245710 223920 256080 253120 262320 268740 296410 298070 285680 323830 267550 285050 319050 278080 295170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 425400000 17064 1710 16170 32406;32407 25961 25961 1 9606 Homo sapiens 0.07442906374035374 LPSGEDYNLK Unmodified 1134.5557 0.55570376 2079 A8K5T7;Q9Y2Z0;B4DYC6;Q9Y2Z0-2;A8K7W3 SUGT1 Suppressor of G2 allele of SKP1 homolog yes no 0 0 0 5.5 0.5 1 1 51.141 51.217 2 0.00044618 14272 20230619_1885_Aki_TMTPro18x_K_F5 145.9 88.623 81426 66661 71825 88080 79164 102360 87010 79049 104930 101190 105330 101050 122850 95721 76488 126630 118630 114230 75219 61203 73991 87320 82025 101840 87807 82994 105920 101130 108720 102470 122600 100570 81195 125900 113060 108650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85455000 17065 2079 16171 32408;32409 25962 25962 1 9606 Homo sapiens -0.00619185973164349 LPSGSGAASPTGSAVDIR Unmodified 1641.8322 0.83221298 3815 Q09666;B4DTV0 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 7 0 1 46.996 47.084 3 0.00016479 12243 20230619_1887_Aki_TMTPro18x_K_F7 82.244 66.704 219750 179820 225160 253850 264690 263030 263490 248500 338860 196350 191570 157030 176140 133430 251520 134800 174370 146810 203240 165220 229020 250300 271640 264950 267920 253560 334650 200330 202730 160430 183710 138640 249510 136510 167390 139420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40245000 17066 3815 16172 32410 25963 25963 1 9606 Homo sapiens 0.036970157331325026 LPSLGAGFSQGLK Unmodified 1273.703 0.7030367 2064 A8K548;Q8IZL8;C9JFV4;B4DR36;E7EV54;B4DEX7;O15451 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 0 0 0 4 0 1 61.3 61.304 3 8.8741E-07 18858 20230619_1883_Aki_TMTPro18x_K_F4 142.51 111.96 43751 35072 37071 45121 36127 46007 45193 43610 52231 48489 38053 36110 45518 37150 41346 46904 47458 51265 40399 32194 38258 44739 37915 46382 45244 44853 52267 48383 40029 37259 46025 38836 42485 47200 45374 48632 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128400000 17067 2064 16173 32411 25964 25964 1 9606 Homo sapiens 0.07713330631668214 LPSNTLDR Unmodified 914.48214 0.48214489 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 6 0 1 41.471 41.565 2 0.0052067 10189 20230619_1886_Aki_TMTPro18x_K_F6 114.19 64.253 190170 155420 171770 178320 214290 222800 208950 200530 278230 227230 246700 246370 252050 209310 210950 271890 283700 245050 175710 142490 176680 178810 219130 221480 213060 207110 278130 228930 254770 248070 255190 220400 219570 270550 270470 233170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 477190000 17068 3758 16174 32412 25965 25965 1 9606 Homo sapiens 0.02148310375048368 LPSRPGAQGVEPQNLR Unmodified 1717.9224 0.92236539 1158 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A994J4D5 GATAD2B Transcriptional repressor p66-beta yes no 0 0 1 1.5 0.5 1 1 41.027 41.027 3 3.3456E-06 10234 20230619_1881_Aki_TMTPro18x_K_F2 116.58 101.04 90402 88736 99911 81097 120860 104910 114730 107050 105020 59891 70878 59830 73754 62052 87719 60048 66999 63526 83769 81150 100870 82968 123410 104450 115720 107960 106050 63127 74444 60902 75830 63843 87652 60671 64280 60313 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144570000 17069 1158 16175 32413;32414 25966;25967 25967 2 9606 Homo sapiens 0.09212109852228423 LPSRPPLPGSGGSQSGAK Unmodified 1691.8955 0.89548193 1224 A0A140VK39;Q9Y570;Q9Y570-4 PPME1 Protein phosphatase methylesterase 1 yes no 0 0 1 4.5 0.5 1 1 43.856 43.918 3 0.00029146 11115 20230619_1885_Aki_TMTPro18x_K_F5 77.681 55.808 310720 243870 268890 320900 310140 358110 330070 316880 389450 392370 373190 385400 461410 374640 325990 491580 449930 469310 286920 223930 277590 318090 319710 358290 333420 328630 392990 392390 387450 391340 461690 393070 341630 490340 429430 445910 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 255250000 17070 1224 16176 32415;32416 25968;25969;25970 25970 3 9606 Homo sapiens 0.07721001241020531 LPSRPPPHYPGIK Unmodified 1457.8143 0.81431849 3319 O75923-15;O75923-3;O75923-9;O75923;O75923-14;O75923-6;O75923-12;O75923-5;O75923-11;O75923-4;O75923-10;O75923-2;O75923-8;O75923-7;O75923-13 DYSF Dysferlin yes no 0 0 1 2 0 1 38.024 38.087 4 0.007295 8939 20230619_1881_Aki_TMTPro18x_K_F2 61.641 36.85 259170 164810 245540 229940 254310 300280 290020 257270 377000 276780 270630 254550 347210 287870 216560 264830 403510 319020 239210 151570 250650 227760 264730 297200 292870 266350 374690 278370 285740 260550 345930 294810 233020 269420 383680 302740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174980000 17071 3319 16177 32417 25971 25971 1 9606 Homo sapiens 0.10372390059569625 LPSSPVYEDAASFK Unmodified 1509.7351 0.73512469 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;B3KRK4;B4E358;H0YCD9;H0YEV2 CTTN Src substrate cortactin yes no 0 0 0 6.5 0.5 1 1 58.695 58.752 3 1.0924E-09 17590 20230619_1886_Aki_TMTPro18x_K_F6 168.31 148.73 84501 68000 80809 95116 84331 98405 101110 98431 107000 109220 96538 124400 125150 108220 112890 128680 115950 154810 78100 62476 82553 93835 87804 99222 101140 100870 108340 110260 101010 124960 126250 113280 115270 130380 111180 146620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231930000 17072 1413 16178 32418;32419 25972 25972 1 9606 Homo sapiens 0.0006465352412305947 LPSTGEGTQFYLFENVDNAQQFK Unmodified 2632.2445 0.24454697 3103 I3L159;I3L1F5;Q6IBP2;Q6FHB5;Q53HF1;P30519;B3KSE0;A0A087WT44;P30519-2 HMOX2 Heme oxygenase 2 yes no 0 0 0 7 0 1 63.482 63.514 3 6.7272E-09 19451 20230619_1887_Aki_TMTPro18x_K_F7 115.63 109.41 32920 19617 25240 22512 13803 17255 22823 12262 27674 23373 29442 23842 27928 21225 30295 40268 28694 33512 30330 18011 26089 22440 15528 17742 22630 13219 27953 23066 30027 24153 28647 22988 30736 39743 27503 31884 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 652230000 17073 3103 16179 32420 25973 25973 1 9606 Homo sapiens -0.006285525604198483 LPTDLTACDNR Unmodified 1274.5925 0.59249998 4394 Q96RS6;Q96RS6-3;Q96RS6-2;A0A7I2V457 NUDCD1 NudC domain-containing protein 1 yes no 0 0 0 4 0.816 1 1 1 48.067 48.133 2 4.2832E-12 13313 20230619_1882_Aki_TMTPro18x_K_F3 208.11 171.71 133820 112410 136040 130330 139150 143520 142870 136500 156980 161320 174450 172300 195430 147230 142740 197450 187720 185990 123780 103060 138010 130380 144310 144020 144320 140620 159880 162030 179000 173640 196180 155420 148850 196800 179160 176780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 520080000 17074 4394 16180 32421;32422;32423 25974;25975 25974 2 9606 Homo sapiens -0.03381257418914174 LPTGQISGPEIK Unmodified 1238.6871 0.68705229 3815 Q09666;Q6ZQN2 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 7.5 0.5 1 1 53.359 53.43 3 1.2201E-05 15036 20230619_1888_Aki_TMTPro18x_K_F8 132.86 103.78 56363 44894 51757 37358 42643 57972 56619 60056 67633 65139 72617 82633 74519 68073 78786 82459 85930 99526 52073 41059 52753 38703 45501 57111 56642 61303 68454 66085 74441 82588 76238 71454 80458 83571 82243 94299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183340000 17075 3815 16181 32424;32425 25976 25976 1 9606 Homo sapiens 0.07725624394743136 LPTSAPRPTR Unmodified 1094.6196 0.61964142 3873 Q14008-2;Q14008;Q14008-3;Q8NAH3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 1 4.5 1.12 1 1 1 1 34.865 34.928 3 0.0044703 7490 20230619_1885_Aki_TMTPro18x_K_F5 74.849 52.019 181560 107970 214850 177390 273710 251320 194670 229390 197530 177290 296460 334100 197430 238920 359880 111400 307070 230670 167850 99532 216030 174390 277020 248030 201240 234390 204790 186670 295740 328440 212730 242550 358750 121570 293780 218100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103170000 17076 3873 16182 32426;32427;32428;32429 25977 25977 1 9606 Homo sapiens 0.07611638974458401 LPVALDPGAK Unmodified 979.57023 0.57023162 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 5.75 2.77 1 2 1 56.128 56.172 2;3 0.00056789 16230 20230619_1887_Aki_TMTPro18x_K_F7 86.624 61.407 350510 299230 369310 400480 372540 431440 436170 434100 493200 482390 484720 498850 545380 422260 447670 584250 525120 520790 324340 274730 373900 396470 388530 433870 437880 444590 498970 485410 500400 503230 549840 446750 461980 580550 501660 495330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 402710000 17077 3384 16183 32430;32431;32432;32433 25978;25979;25980 25979 3 9606 Homo sapiens 0.07962930965663872 LPVEPHIGK Unmodified 988.57057 0.57056597 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5;E7EWK3;H7C5F5;H7C514 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 0 0 7.5 0.5 1 1 47.035 47.103 3 0.00024944 12314 20230619_1888_Aki_TMTPro18x_K_F8 120.99 91.245 209770 167480 185090 199570 200770 200130 221570 204420 236700 244830 239650 214770 265190 216890 199570 299790 280130 251520 193750 153620 190380 198950 207730 202530 222650 209660 240520 244370 246630 219690 266750 228040 209090 296920 267050 239510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 198520000 17078 4503 16184 32434;32435 25981;25982 25982 2 9606 Homo sapiens 0.07582350685515848 LPVLAGCLK Unmodified 969.56812 0.56812313 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4 0 1 59.884 59.886 3 0.00087892 18270 20230619_1883_Aki_TMTPro18x_K_F4 100.15 71.75 114870 113950 108660 85810 149670 208890 146220 138880 231910 22748 22846 24326 24462 17337 49468 18993 24525 20621 106310 104070 111460 90694 152660 200220 150040 143520 222370 29754 33398 24476 26168 18219 48314 19251 23679 19583 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 235210000 17079 3758 16185 32436 25983;25984 25983 2 9606 Homo sapiens 0.08212178956205207 LPVPAAAPTPWETHK Unmodified 1613.8566 0.85657723 3820 Q12788;A0JLS5;J3KNP2 TBL3 Transducin beta-like protein 3 yes no 0 0 0 1.5 0.5 1 1 55.056 55.066 3 6.6082E-14 16611 20230619_1881_Aki_TMTPro18x_K_F2 172.1 148.25 84219 82218 96018 99164 97134 116910 102460 100470 121530 109960 101090 97209 119740 89270 111000 133450 117480 119070 78059 75370 96606 98983 101010 116480 103590 104030 121940 110280 105480 99070 121140 94737 113510 132520 112360 113240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184480000 17080 3820 16186 32437;32438 25985;25986 25986 2 9606 Homo sapiens 0.07420320677306336 LPVVIGGLLDVDCSEDVIK Unmodified 2040.0813 0.081293373 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 6 0.816 1 1 1 65.832 65.869 3 8.8046E-20 20680 20230619_1886_Aki_TMTPro18x_K_F6 184.99 167.08 179840 124780 143850 168420 129350 140660 175140 156740 152060 204940 194160 178330 216800 172980 174780 253650 213050 235900 165860 114670 149060 166110 136710 144720 173240 160390 158140 203620 198110 182230 218490 182940 181030 252340 203630 224160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 674560000 17081 826 16187 32439;32440;32441 25987;25988;25989 25988 3 9606 Homo sapiens 0.10285597854817752 LPVVISQCGEM Oxidation (M) 1247.589 0.5889945 3257 Q6FH57;Q6FH36;O43447;C9JQD4;H0YEL5;A0A7I2YQS4;O43447-2 PPIH Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase H yes no 0 1 0 4.5 0.5 1 1 60.386 60.413 2 2.1745E-05 18106 20230619_1885_Aki_TMTPro18x_K_F5 144.12 124.34 18055 17543 22206 20841 18963 20931 19392 22190 21593 17834 22793 20297 23080 18868 23926 22006 21759 21727 16746 16080 22152 20788 19955 21190 19619 22463 21903 18334 23330 20469 23577 19677 24185 22056 20840 20640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210230000 17082 3257 16188 32442;32443 25990 25990 1924 1 9606 Homo sapiens -0.02489643517105833 LPVVVPLHSLDEK Unmodified 1444.829 0.8289655 364 Q9H072;A0A024R5X7;O76031 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes no 0 0 0 7.5 0.5 1 1 58.235 58.284 3 7.0208E-08 17112 20230619_1888_Aki_TMTPro18x_K_F8 152.47 134.6 66499 63939 67284 84937 73936 86176 83383 80420 88463 91086 77675 79919 93669 77219 79402 92019 90100 99145 61563 58674 68505 84026 76548 86896 83668 82859 89480 91149 80921 81532 94410 80569 81653 92592 86166 94060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 656790000 17083 364 16189 32444;32445 25991 25991 1 9606 Homo sapiens 0.12434417417057375 LPVWETIVCTMR Unmodified 1503.7578 0.75779117 2670 B7SBB1;O00170;D0EKE4;A5JGZ4;A0A804HKH9;D0EKE6;D5LTB3;C8CK04;C8CHN4;C0JXB8;D0EKE5;C0JXB9;A0A804HJ38;A0A804HIX8;E9PMH2;V9GYQ3;A0A804HKL7;A0A804HKP8;D0EKE7;E5L4L0;A7YDK2 AIP AH receptor-interacting protein;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 4 0 1 64.57 64.579 3 0.0013389 20228 20230619_1883_Aki_TMTPro18x_K_F4 84.718 68.58 5390.2 3916.4 4879.9 5859.1 4379.2 6729.4 7383.9 5870 6649.9 8574.9 5923.4 8016 8544.4 8262.6 5978.7 9480.9 9080.8 11877 4976.8 3602.6 5002.8 5764.5 4681 6712 7242.3 6132 6801.4 8503.3 6240.1 8162.4 8526.4 8580.7 6316 9629.8 8677.8 11245 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11717000 17084 2670 16190 32446 25992 25992 1 9606 Homo sapiens 0.02606258116384197 LQAALDDEEAGGR Unmodified 1343.6317 0.63172225 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q9UEL2 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 1 0 1 47.493 47.493 2 0.00051997 13352 20230619_1880_Aki_TMTPro18x_K_F1 114.72 91.292 25740 18817 23925 25407 23189 28164 24584 27060 35904 19994 25366 22020 23815 17885 22394 25679 28090 25748 23771 17288 24453 25149 24229 28230 25060 27529 35451 20677 26426 22156 24283 19007 23128 25672 26805 24464 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12726000 17085 3776 16191 32447 25993 25993 1 9606 Homo sapiens -0.02634833863703534 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR Oxidation (M) 3141.4269 0.4268978 3776 Q00839;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q9UEL2 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 1 1 1.71 0.7 3 3 1 51.948 51.974 3;4 1.2088E-15 15644 20230619_1881_Aki_TMTPro18x_K_F2 140.74 134.13 114680 88987 99719 120510 115680 140180 114970 123550 139890 141620 145830 126550 137420 117140 131250 153270 127690 142430 105890 81740 102920 119300 119050 139820 116770 127810 141380 141720 148840 128930 140210 123050 133510 152770 122310 135340 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1228500000 17086 3776 16192 32448;32449;32450;32451;32452;32453;32454 25994;25995;25996;25997;25998 25998 2460 5 9606 Homo sapiens -0.05815857738662089 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR Unmodified 3125.432 0.43198317 3776 Q00839;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q9UEL2 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 1 1.5 0.5 2 2 55.707 55.717 3;4 1.9575E-125 16846 20230619_1881_Aki_TMTPro18x_K_F2 360.93 348.87 105660 83229 95893 101790 86406 111440 100910 97107 112040 118750 113790 111230 132570 98577 122210 134850 124690 128700 97605 76365 98132 101390 91049 111600 101270 100790 113650 118630 117490 112870 134110 104090 124660 134540 119300 122290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1047299999.9999999 17087 3776 16192 32455;32456;32457;32458 25999;26000 26000 2 9606 Homo sapiens -0.045715538760759955 LQAANAEDIK Unmodified 1071.556 0.55603811 2110 Q53GX6;A8K7Q1;Q02818;B4DZX0;H7BZI1;C9JKZ2;C9JBD3;C9J3C1 NUCB1 Nucleobindin-1 yes no 0 0 0 4 0 1 46.137 46.181 2 9.2216E-11 12239 20230619_1883_Aki_TMTPro18x_K_F4 164.97 86.873 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17088 2110 16193 32459 26001 26001 1 9606 Homo sapiens 0.02312233746692982 LQAASPELTQAAIMEK Oxidation (M) 1715.8764 0.87638598 1682 A0A7L4XSC9;A0A7M2JGN3;A0A7L4XVG2;Q53Y41;Q6IBS8;A0A7S6PWV5;B4DPL5;A0A7L4XVT7;A0A7L4XUZ5;A0A7S6PWV2;A0A7L4XT53;A0A3S5X9I4;A0A3Q8A2L5;P20711;P20711-3;A0A7L4XT01;A0A087WV24;A0A3S5WLQ6;A0A0S2Z3N4;A0A3Q7ZZZ2;A0A3Q7ZYN3;A0A3S6D699;A0A3S6CJ90;A0A3S6CVP2;A0A087WU57;A0A3S6CPU7;A0A3S6CPV2;A0A3S6CS67;A0A3S5XFR7;A0A3S6CVQ1;A0A5C0B7Z4;A0A3S6CLD8;A0A5C0B937;A0A3Q8A2M4;A0A3S6CN46;A0A3S6D691;A0A3S5X9H9;A0A3Q8A018;A0A3S6CJ93;A0A3S5WLQ3;A0A5C0BAW3;A0A3S5X9H4;A0A3Q7ZZY9;A0A3Q8A2K4;A0A5C0B869;A0A3S7HNV4;A0A3S6CPK2;P20711-2;A0A3S5X9H5;A0A3S6CYS1;A0A3S6CS78;A0A3Q7ZZZ7;A0A5C0BC39;F8WER1 DDC Aromatic-L-amino-acid decarboxylase yes no 0 1 0 6 0 1 54.535 54.612 3 0.00028463 15896 20230619_1886_Aki_TMTPro18x_K_F6 83.37 54.394 40890 44489 49975 50220 56325 60608 65075 84287 79292 62878 69706 61577 69676 63875 80785 83993 63161 76560 37958 40744 50119 50431 58211 61039 65575 83801 79528 64653 71945 62757 71657 66849 81007 83658 60695 72746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 273680000 17089 1682 16194 32460 26002 26002 1101 1 9606 Homo sapiens 0.04708283835111615 LQAAVDGPMDK Unmodified 1143.5594 0.55940893 3626 Q53HT6;Q53G72;P51572;P51572-2;A0A2R8Y5M6 BCAP31 B-cell receptor-associated protein 31 yes no 0 0 0 4 0 1 50.571 50.602 2 0.00010961 14259 20230619_1883_Aki_TMTPro18x_K_F4 142.08 108.96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17090 3626 16195 32461 26003 26003 1 9606 Homo sapiens -0.006628394709423446 LQAAVDGPMDKKEE Unmodified 1529.7396 0.73955814 3626 Q53HT6;Q53G72;P51572;P51572-2;A0A2R8Y5M6 BCAP31 B-cell receptor-associated protein 31 yes no 0 0 2 4.5 0.5 1 1 48.42 48.478 3 6.9233E-05 13283 20230619_1883_Aki_TMTPro18x_K_F4 112.72 86.249 299810 284570 352820 334270 334510 328140 390100 357780 364180 388050 403960 339090 403100 260560 418990 301050 310980 210830 277910 260820 353590 333600 349750 333150 389390 364360 374180 388890 412250 343820 411400 273770 419120 297320 297900 201570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 213880000 17091 3626 16196 32462;32463 26004;26005 26004 2 9606 Homo sapiens -0.004122053246192081 LQAAYAGDK Unmodified 935.47125 0.47124585 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 6.67 0.471 1 2 44.639 44.726 2 7.2357E-06 11553 20230619_1886_Aki_TMTPro18x_K_F6 179.37 125.17 76705 42198 87240 86465 103240 142300 104580 117180 141500 86385 117910 141610 131120 118840 114420 70520 168160 146550 70863 39043 88027 84317 106260 138890 106510 120560 140900 90755 122810 140330 132720 120830 119340 76058 160230 138470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99121000 17092 2337;3778;3779 16197 32464;32465;32466 26006;26007 26006 2 9606 Homo sapiens 0.000929080007608718 LQAEAFQAR Unmodified 1032.5352 0.53524309 2790 CON__Q03247;A0A0S2Z3V0;A0A346DBY2;J9ZVQ3;A0A0S2Z3D5;P02649;A0A0S2Z3J5;A0A0S2Z3B1 APOE Apolipoprotein E yes no 0 0 0 7 0 1 44.339 44.422 2 0.0030509 11074 20230619_1887_Aki_TMTPro18x_K_F7 100.71 15.966 + 96238 82565 94172 103310 100710 130740 114310 103810 155420 142940 196260 257040 145300 136620 194270 214180 256340 313070 89000 75749 96024 102960 104680 129460 115730 109050 157440 145790 197690 251530 152420 148990 200240 219370 245060 296100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145200000 17093 2790 16198 32467 26008 26008 1 9606 Homo sapiens 0.02027688157704688 LQAEAPHIVVGTPGR Unmodified 1543.8471 0.84707518 3883 Q14240;Q14240-2;E7EQG2;Q9NZE6;B4DJX6 EIF4A2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 0 0 7.5 0.5 1 1 45.761 45.824 3 9.9344E-19 11777 20230619_1888_Aki_TMTPro18x_K_F8 198.98 174.02 192280 155570 184230 187470 165980 193320 204280 196120 237610 214800 218450 230160 251850 194960 229790 234570 221190 219820 177720 142710 187580 186830 175000 195100 204790 200710 239380 216580 226590 231730 254780 204420 233600 234270 211710 208950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2084399999.9999998 17094 3883 16199 32468;32469 26009;26010 26010 2 9606 Homo sapiens 0.09690552391771234 LQAEAQQLR Unmodified 1055.5724 0.57235688 437 A0A024R7B7;Q16543;Q6FG59;K7EQA9;K7EKQ2 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 41.758 41.801 2 3.5834E-07 10251 20230619_1885_Aki_TMTPro18x_K_F5 152.79 103.38 101890 71630 87921 87626 117640 131610 106640 100780 151890 99564 104660 94564 105080 87518 105040 103730 120390 91621 94026 65754 90921 87740 119680 129030 109490 105040 150150 100690 109560 96040 107260 91363 107640 103330 114840 87256 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100260000 17095 437 16200 32470;32471 26011;26012 26012 2 9606 Homo sapiens 0.046793597034593404 LQAEISQAAR Unmodified 1085.5829 0.58292157 2241 B4DLS8;Q53GV6;B2R791;O43395;O43395-3 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes no 0 0 0 5 0 1 44.64 44.719 2 1.4578E-06 11491 20230619_1885_Aki_TMTPro18x_K_F5 172.98 110.11 117270 91424 100050 113150 127620 142770 124060 132040 158230 129720 142060 127020 135300 113890 125160 141790 152340 133980 108270 83897 103570 112860 130400 141860 126340 135520 158540 131210 146100 128720 137850 119390 129040 141560 145370 127410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123160000 17096 2241 16201 32472 26013 26013 1 9606 Homo sapiens 0.0435534235787145 LQAENDASKEEVK Unmodified 1459.7155 0.71545188 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 1 2.75 0.829 2 1 1 41.935 41.997 3 7.027E-06 10432 20230619_1882_Aki_TMTPro18x_K_F3 125.36 107.66 195170 132990 195260 217220 210230 205990 216040 213950 248910 232440 263300 231070 245430 187080 237390 143760 233370 166260 180280 122500 198670 212180 217150 209300 218550 218570 252220 233870 268470 233010 250460 192290 240750 146800 222860 157920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 241150000 17097 2727 16202 32473;32474;32475;32476 26014;26015;26016 26015 3 9606 Homo sapiens 0.00398277513386347 LQAFGFCEYKEPESTLR Unmodified 2073.983 0.98297631 3611 P49756;P49756-2;P49756-3;E9PQU5 RBM25 RNA-binding protein 25 yes no 0 0 1 7.5 0.5 1 1 57.789 57.841 3 8.440799999999999E-19 16927 20230619_1887_Aki_TMTPro18x_K_F7 189.32 174.16 280130 239800 268600 300060 246810 266560 297840 290580 248800 320250 287950 245910 284900 225540 275290 279100 254000 226620 259020 220010 273670 297660 259250 272690 295960 296050 258180 319580 293260 252390 290220 236230 278940 276710 243040 215900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 213210000 17098 3611 16203 32477;32478 26017;26018 26017 2 9606 Homo sapiens -0.011055856703933387 LQAFSAAIESCNK Unmodified 1437.6922 0.69221402 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 3.67 3.09 1 1 1 58.995 59.015 2;3 1.4543E-15 18061 20230619_1880_Aki_TMTPro18x_K_F1 199.8 182.59 151700 128360 158030 139060 112060 120540 129850 130640 135210 170710 147570 126420 165980 127270 144030 177590 163200 159510 140350 117610 159170 139440 120460 123620 130200 133840 138160 168960 151490 130460 167690 134010 148090 176530 155940 151710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1356000000 17099 3789 16204 32479;32480;32481 26019;26020;26021 26019 3 9606 Homo sapiens -0.009124398049380034 LQAGDAPSVGGSCR Unmodified 1373.6358 0.63576177 939 A0A0A0MRJ3;A0A8I5KSE4;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-6 NAV1 Neuron navigator 1 yes no 0 0 0 5 0 1 40.023 40.113 2 0.015835 9565 20230619_1885_Aki_TMTPro18x_K_F5 79.659 50.186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17100 939 16205 32482 26022 26022 1 9606 Homo sapiens -0.0361106764160013 LQAGEETASHYR Unmodified 1360.6371 0.63714198 4651 Q9UBB6-2;Q9UBB6;B4DJ92 NCDN Neurochondrin yes no 0 0 0 3.5 0.5 1 1 36.46 36.51 3 1.5635E-51 8176 20230619_1882_Aki_TMTPro18x_K_F3 287.76 261.01 32034 23468 29673 37027 37527 32168 37610 38285 44144 43663 51390 49295 42715 41331 40936 51557 52322 48116 29583 21601 30492 36196 38298 33047 38121 38841 44878 44001 51986 49539 43830 43403 42346 51425 49922 45753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162100000 17101 4651 16206 32483;32484 26023 26023 1 9606 Homo sapiens -0.028751102811611418 LQAIGELESIGELFSR Unmodified 1760.9309 0.93086439 236 A0A024R3C7;Q13315;B4DSP3;Q68DE6 ATM;DKFZp781A0353 Serine-protein kinase ATM yes no 0 0 0 7.5 0.5 1 1 66.705 66.726 3 7.3106E-06 20818 20230619_1887_Aki_TMTPro18x_K_F7 107.98 98.447 5968.5 5860.2 8288.3 7357.8 8996.1 8052.2 8466.7 10097 8545.6 7517.6 7711.2 7815.3 7942 5815 9627.1 7333.6 7941.9 7409.4 5543.5 5374.2 8229.3 7322.1 9250.9 8140.3 8577.1 10098 8668.5 7739.9 7967.5 7853.8 8170.3 6149 9653.7 7357.2 7611.4 7038.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9853600 17102 236 16207 32485;32486 26024 26024 1 9606 Homo sapiens 0.08083618978139384 LQALANEQAAAAHELEK Unmodified 1805.9272 0.92717599 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 0 4 0 1 55.749 55.757 3 0.00017744 16540 20230619_1883_Aki_TMTPro18x_K_F4 84.493 71.867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17103 380 16208 32487 26025 26025 1 9606 Homo sapiens 0.056449492043611826 LQALLEK Unmodified 813.496 0.49600404 1761 A0A8I5KY07;A0A8I5KRP1;A0A8I5KRK1;A0A8I5KYQ0;A0A8I5KZB3;Q9H2M9;A0A8I5QJC9;A0A8I5KSQ5;A0A8I5KWJ9;A0A8I5QJG4 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 1 0 1 58.895 58.895 2 0.011144 18069 20230619_1880_Aki_TMTPro18x_K_F1 121.62 0 73222 56859 67199 79885 67090 88730 74784 74560 88731 97257 102640 109740 106910 98170 92527 117620 114160 124470 67639 52250 68856 78849 70052 88673 75410 77773 90201 97459 104880 110440 108350 102650 95678 118190 109090 118110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43159000 17104 1761 16209 32488 26026 26026 1 9606 Homo sapiens 0.08179587874144545 LQALVNSLCAGQSP Unmodified 1456.7344 0.73441319 4137 Q6XQN6;Q6XQN6-2;Q6XQN6-3;Q8WY82 NAPRT Nicotinate phosphoribosyltransferase yes no 0 0 0 3 0 1 64.821 64.853 3 0.0017319 20469 20230619_1882_Aki_TMTPro18x_K_F3 83.047 73.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17105 4137 16210 32489 26027 26027 1 9606 Homo sapiens 0.024315356034094293 LQAMHLER Oxidation (M) 1012.5124 0.51239916 3813 Q08J23-2;Q08J23;Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 0 1 0 4.5 0.5 1 1 32.297 32.367 3 0.0056537 6531 20230619_1885_Aki_TMTPro18x_K_F5 83.623 59.83 39115 36198 35193 41903 49154 52670 43281 44457 59468 33173 36391 33674 33724 27095 44275 36281 39276 29988 36168 33175 36325 41981 49821 52261 44458 45680 58667 34202 38309 33969 35003 28648 44512 35990 37563 28583 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21130000 17106 3813 16211 32490;32491 26028 26028 2496 1 9606 Homo sapiens 0.00664345768586827 LQAMHLER Unmodified 996.51748 0.51748454 3813 Q08J23-2;Q08J23;Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 0 0 0 7 0 1 40.312 40.38 3 0.0021606 9406 20230619_1887_Aki_TMTPro18x_K_F7 107 75.712 99378 77206 85047 97742 100720 111790 104620 103430 134890 91462 95899 95132 95317 70779 102190 97413 105310 90927 91753 70867 87902 97185 103570 111780 106150 105930 134010 93265 100220 95611 97582 75256 103940 97120 100630 86484 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80378000 17107 3813 16211 32492 26029 26029 1 9606 Homo sapiens 0.019086496312070267 LQAQQDAVNIVCHSK Unmodified 1709.8519 0.85190256 3655 P55036;Q5VWC4;P55036-2;A6PVX3 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes no 0 0 0 7.5 0.5 1 1 48.868 48.944 3 1.4669000000000002E-25 13066 20230619_1888_Aki_TMTPro18x_K_F8 234.67 214.66 286420 271280 289950 326580 325870 381170 351690 347490 368450 360140 383770 323040 355420 305690 322630 399240 426900 440120 265130 248710 295070 325950 336440 380490 353640 357640 375010 362200 391370 329390 362230 320980 334840 401700 407540 417540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1246500000 17108 3655 16212 32493;32494 26030 26030 1 9606 Homo sapiens 0.02537068472224746 LQAQSLSTVGPR Unmodified 1255.6884 0.68844927 3252 O43290;B4DDH9 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 0 1.5 0.5 1 1 45.275 45.316 2 7.0028E-24 12252 20230619_1881_Aki_TMTPro18x_K_F2 257.8 213.08 114430 88424 104250 115790 116920 145100 115460 123750 142020 126090 124850 113890 138100 104300 121430 142760 149160 135030 105690 81195 107020 115030 120600 143950 117340 127910 142500 126990 129400 115940 139680 110010 125410 142340 142350 128380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109710000 17109 3252 16213 32495;32496 26031 26031 1 9606 Homo sapiens 0.07083258483521604 LQASISAFR Unmodified 991.54508 0.5450795 1616 Q27J81;Q27J81-2;A0A6Q8PHA2;A0A6Q8PH71;A0A6Q8PHG2;A0A6Q8PGN3;A0A6Q8PF44;A0A6Q8PH25;A0A6Q8PF29;A0A087X118;A0A6Q8PFW4;A0A6Q8PGC7;A0A0A0MQU1;A0A6Q8PHS8 INF2 Inverted formin-2 yes no 0 0 0 3.5 0.5 1 1 51.535 51.582 2 0.0096618 14857 20230619_1882_Aki_TMTPro18x_K_F3 85.764 6.1681 485950 449570 464560 549420 560340 669210 581580 523980 666730 382420 387280 349820 404940 340730 468040 370600 412330 372500 449550 412250 475760 547990 575540 664140 587410 541800 662440 393830 411270 356550 415780 353430 471180 372420 394770 353930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86007000 17110 1616 16214 32497;32498 26032;26033 26032 2 9606 Homo sapiens 0.0489687616310448 LQASNVTNK Unmodified 973.51926 0.51925868 2053 Q5QPL9;A8K4T9;Q53GL6;Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1;B4DSJ1;Q5QPM2 RALY RNA-binding protein Raly yes no 0 0 0 8 0 1 41.18 41.172 2 0.00065739 9967 20230619_1888_Aki_TMTPro18x_K_F8 140.16 66.904 13706 6163.1 14785 17145 21226 25753 16451 21514 18709 13863 23839 21803 17273 19045 17526 8968.5 21562 19445 12647 5743.1 15042 16495 21429 25256 16953 22051 19104 14669 23914 21676 17877 19194 17990 9794.5 20577 18366 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12920000 17111 2053 16215 32499 26034 26034 1 9606 Homo sapiens 0.03143981920800343 LQAVEVVITHLAPGTK Unmodified 1674.9669 0.96685596 4711 Q9Y2V2 CARHSP1 Calcium-regulated heat stable protein 1 yes yes 0 0 0 3.5 0.5 1 1 63.285 63.303 3 3.0085999999999995E-19 19787 20230619_1882_Aki_TMTPro18x_K_F3 167.28 150.06 94309 75271 86240 79717 65803 80446 78075 73164 82585 100160 104740 100310 104490 93784 102210 98690 100890 113350 87130 68967 87926 80207 70378 81152 78212 75997 84827 99767 106390 101580 106550 97225 103890 99936 96630 107460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 533970000 17112 4711 16216 32500;32501 26035 26035 1 9606 Homo sapiens 0.15637120945689276 LQAYHTQTTPLIEYYR Unmodified 1996.0054 0.005426314 1240 F8W1A4;A0A140VK93;P54819-5;P54819-2;P54819;F8VY04;A0A5K1VW67;P54819-6 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes no 0 0 0 1.5 0.5 1 1 51.869 51.888 3 1.4371999999999998E-52 15244 20230619_1881_Aki_TMTPro18x_K_F2 294.39 254.96 113800 99585 114540 114650 106300 114320 120450 115820 124220 137130 128230 129110 139730 121620 131900 157990 143420 151180 105280 91283 116170 114590 111400 115700 120780 118800 126600 137180 131910 131210 141900 127620 135050 157720 137170 143640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 669800000 17113 1240 16217 32502;32503 26036;26037 26037 2 9606 Homo sapiens 0.04726381789578227 LQCPTCIK Unmodified 1018.494 0.49397191 3642 P53582;H0Y9L0;D6RF24 METAP1 Methionine aminopeptidase 1 yes no 0 0 0 1.5 0.5 1 1 45.987 45.987 2 0.0041789 12571 20230619_1881_Aki_TMTPro18x_K_F2 112.84 57.311 43789 40542 44448 40232 48252 57602 47083 44904 63538 53544 57799 56291 58942 46393 57570 57135 62865 56120 40529 37107 45133 40909 49849 56650 48047 46976 63544 53769 59612 56690 60037 48764 58851 57193 60051 53339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35472000 17114 3642 16218 32504;32505 26038;26039 26039 2 9606 Homo sapiens -0.014535321976381965 LQCTYIEVEQVSK Unmodified 1595.7865 0.78650834 1459 A0A384NKK8;J3QL71;Q96FV2-2;Q96FV2;J3KT79;J3QR84;J3QRJ1 SCRN2 Secernin-2 yes no 0 0 0 6 0 1 56.69 56.762 3 0.0005979 16775 20230619_1886_Aki_TMTPro18x_K_F6 90.707 72.898 30807 21370 29901 29284 31058 37342 32935 29483 35208 40938 41273 45849 37763 33363 40420 43742 43381 47903 28452 19642 30468 29021 32244 36957 33173 30978 36008 40898 41948 45873 38788 35373 41239 44011 41509 45438 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30858000 17115 1459 16219 32506 26040 26040 1 9606 Homo sapiens 0.012446542265251992 LQDAEEMKK Unmodified 1090.5329 0.53285983 1036 O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V4K6;A0A7I2V581;Q57Z91;O60282-2;A0A7I2V352 KIF5C Kinesin heavy chain isoform 5C;Kinesin-like protein yes no 0 0 1 4.5 0.5 1 1 44.71 44.771 3 0.045023 11600 20230619_1883_Aki_TMTPro18x_K_F4 52.837 23.149 69959 48781 69229 78768 85682 87626 85785 92733 103900 88333 99913 101140 100350 85348 89095 73565 101310 92980 64624 44923 70688 77156 87665 88023 87056 94242 104610 89910 102710 101510 101870 87961 91375 75272 96757 88137 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37395000 17116 1036 16220 32507;32508 26041 26041 1 9606 Homo sapiens -0.008785283622728457 LQDAEIAR Unmodified 914.48214 0.48214489 3392 R4GN98;P06703 S100A6 Protein S100;Protein S100-A6 yes no 0 0 0 2.5 0.5 1 1 41.19 41.258 2 0.0012811 10149 20230619_1882_Aki_TMTPro18x_K_F3 145.13 97.686 219650 129250 174330 206470 126390 156160 748530 737380 893120 343880 447170 498430 433750 401700 425090 429280 571880 557150 202400 119110 181010 202080 151850 174570 721720 702210 880990 373630 479630 495980 443360 418940 440510 438090 545650 527890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 264350000 17117 3392 16221 32509;32510 26042;26043 26043 2 9606 Homo sapiens 0.021483103750369992 LQDAINILK Unmodified 1026.6073 0.6073454 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 1.5 0.5 1 1 61.998 62.003 2 0.0020162 19517 20230619_1881_Aki_TMTPro18x_K_F2 121.73 65.321 121880 100170 124860 124540 107240 129060 126290 124020 125670 149710 150550 166990 150820 141170 139750 167260 152620 188510 112730 91909 126330 123850 113340 130030 126290 127760 129160 150390 153430 167810 153480 147820 143180 168760 146150 178690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2181200000 17118 1723 16222 32511;32512 26044 26044 1 9606 Homo sapiens 0.09510602511409161 LQDAYYIFQEMADK Unmodified 1733.7971 0.79707302 3188 Q53HJ6;M0QXB4;O14579;O14579-2;Q7Z4Z1 COPE Coatomer subunit epsilon yes no 0 0 0 7.5 0.5 1 1 65.653 65.675 3 9.7574E-07 20372 20230619_1887_Aki_TMTPro18x_K_F7 125.73 113.37 106010 69931 93905 105360 100900 116920 114860 121870 117770 135870 123410 138420 160980 123510 130950 176230 152030 174310 97816 64361 96588 103600 104680 117410 115120 124500 120190 136590 128100 139930 161600 130750 135110 175990 145410 165500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 426670000 17119 3188 16223 32513;32514 26045;26046 26045 2 9606 Homo sapiens -0.04047363119070724 LQDDNQELR Unmodified 1129.5364 0.53636531 1977 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C yes yes 0 0 0 1 0 1 38.636 38.636 2 1.5468E-06 9477 20230619_1880_Aki_TMTPro18x_K_F1 129.85 94.406 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17120 1977 16224 32515 26047 26047 1 9606 Homo sapiens -0.02322142264051763 LQDEFENR Unmodified 1049.4778 0.47778779 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;H0YCH5;H0YEC5;H0YD77 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 1.5 0.5 1 1 44.432 44.473 2 0.0022685 12078 20230619_1880_Aki_TMTPro18x_K_F1 129.42 97.067 333140 243250 351780 366070 403220 493560 420680 437230 524660 417790 465780 407830 448760 358860 380990 457610 503640 424340 307980 223770 356750 361080 415690 487790 426350 449870 525890 423230 479410 413170 455320 377090 395770 456200 480140 403680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 247750000 17121 3752 16225 32516;32517 26048;26049 26048 2 9606 Homo sapiens -0.04497198838521399 LQDEIQNMK Unmodified 1117.5438 0.54375887 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 0 0 4.5 1.12 1 1 1 1 52.574 52.632 3 4.5448E-05 15181 20230619_1883_Aki_TMTPro18x_K_F4 145.72 118.1 252950 179000 193190 187690 341780 470540 281610 317560 506770 401670 388740 529450 600090 509390 307890 698260 621430 643850 233250 164080 203560 192480 343020 450570 294170 336820 498880 405850 414140 531060 592290 535900 337680 694360 591700 612020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2937899999.9999995 17122 3414 16226 32518;32519;32520;32521 26050;26051 26050 2 9606 Homo sapiens -0.010311259879699719 LQDEIQNMK Oxidation (M) 1133.5387 0.53867349 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 1 0 4 0.816 1 1 1 45.33 45.396 3 0.043132 11838 20230619_1885_Aki_TMTPro18x_K_F5 45.973 29.748 55936 45390 51610 51196 59465 70358 63174 59073 82084 63485 70130 78214 77112 62504 56210 94086 88205 89493 51687 41610 52913 51487 61322 69429 64040 61251 82020 64420 72845 78237 77512 66656 59503 93656 84094 85045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 891310000 17123 3414 16226 32522;32523;32524 26052 26052 2029 1 9606 Homo sapiens -0.022754298506015402 LQDEIQNMKEEMAR Oxidation (M) 1749.8026 0.80256911 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 1 1 4.2 0.748 1 2 2 50.585 50.641 3 0.051665 14922 20230619_1882_Aki_TMTPro18x_K_F3 49.223 29.645 541920 430820 548430 467480 1120700 1006600 833900 770250 704070 765960 959540 601000 553120 449670 982400 410270 438850 323030 501060 394830 564500 476280 1108700 972150 853210 802440 734970 769180 953050 613080 596760 466860 958260 410110 424340 308160 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1052299999.9999999 17124 3414 16227 32525;32526;32527;32528;32529 26053;26054 26053 2029;2030 2 9606 Homo sapiens -0.042340075988704484 LQDEIQNMKEEMAR 2 Oxidation (M) 1765.7975 0.79748373 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 2 1 3 0.816 1 1 1 43.225 43.29 3 0.045928 10886 20230619_1883_Aki_TMTPro18x_K_F4 45.863 36.448 97188 79886 93137 88550 237650 182100 171230 148190 136290 137030 202070 136780 108980 79140 179760 68174 76696 60525 89839 73217 97028 89948 232880 176480 175310 153370 143390 139030 199830 137010 117250 82997 175240 68663 74266 57628 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 235880000 17125 3414 16227 32530;32531;32532 26055 26055 2029;2030 1 9606 Homo sapiens -0.054783114614792794 LQDFNVGDYIEAVLDR Unmodified 1865.9159 0.9159426 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 6 0 1 66.975 67.018 3 0.012595 21151 20230619_1886_Aki_TMTPro18x_K_F6 61.167 49.19 3657.8 2943.8 1932.7 4641 2333.7 4305.4 4540.1 3420 4307.3 3563.9 1966.7 3532.3 4128.4 3014.1 4031.9 2990.7 4820.2 3814.5 3368.7 2708.5 2133.2 4534.9 2467.7 4352 4434.3 3565 4309.6 3595.6 2236.2 3561.4 4139.4 3129 4138.2 3055.4 4597.3 3618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11669000 17126 3432 16228 32533 26056 26056 1 9606 Homo sapiens 0.017621271101916136 LQDGSAYTIDWSR Unmodified 1510.7052 0.70522155 302 A0A0G2JNN3;A0A024R4R9;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 LENG8 Leukocyte receptor cluster member 8 yes no 0 0 0 6 0 1 56.218 56.293 2 0.020801 16567 20230619_1886_Aki_TMTPro18x_K_F6 61.11 45.844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17127 302 16229 32534 26057 26057 1 9606 Homo sapiens -0.029702854212018792 LQDLDTDYGSGYPNDPK Unmodified 1896.8378 0.83775186 3316 Q6UQL6;O75792;Q6IBG3 RNASEH2A;JUNB Ribonuclease;Ribonuclease H2 subunit A yes no 0 0 0 4 0 1 55.505 55.516 3 8.4539E-07 16436 20230619_1883_Aki_TMTPro18x_K_F4 115.31 104.27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17128 3316 16230 32535 26058 26058 1 9606 Homo sapiens -0.07479350265703033 LQDLELK Unmodified 857.48583 0.48583328 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;B4DKR8;H7C0A4;Q5HYC5;C9JIZ1;C9J5E5 HDLBP;DKFZp686L08115 Vigilin yes no 0 0 0 5.5 0.5 1 1 55.565 55.635 2 0.051212 16299 20230619_1886_Aki_TMTPro18x_K_F6 89.355 0 590370 475970 556890 587860 500560 617170 598420 586370 671490 708340 669790 762190 805430 649480 588720 918870 810530 898090 545600 436720 567910 584900 527660 621040 600100 604540 680330 710900 693640 767520 807430 688040 616560 916790 773970 852900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73617000 17129 292 16231 32536;32537 26059;26060 26060 2 9606 Homo sapiens 0.05138980148922201 LQDLLETK Unmodified 958.53351 0.53351176 4268 Q8TCG1;Q8TCG1-2 KIAA1524 Protein CIP2A yes no 0 0 0 6 0 1 59.898 59.96 2 0.076117 18138 20230619_1886_Aki_TMTPro18x_K_F6 67.334 24.087 54327 44343 49269 57960 48054 58782 59906 54783 60941 66594 63887 63671 81562 54937 61541 83942 69394 77387 50195 40708 50516 57407 50373 59270 59742 56582 62193 66571 66170 64511 81633 58554 63492 83444 66376 73543 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12221000 17130 4268 16232 32538 26061 26061 1 9606 Homo sapiens 0.05258634349104341 LQDLTLR Unmodified 857.49707 0.49706667 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;B7Z602 HYOU1 Hypoxia up-regulated protein 1 no no 0 0 0 7.5 0.5 1 1 51.324 51.402 2 0.0038151 14108 20230619_1887_Aki_TMTPro18x_K_F7 152.47 40.822 290210 219820 249460 309180 321060 398990 355120 346260 429120 368970 387380 434760 419430 359010 386820 472590 432350 476540 267910 202030 258350 305860 329270 395200 358200 357990 431180 373830 401150 435820 425590 378770 396930 473040 413540 452420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1484699999.9999998 17131 874 16233 32539;32540 26062 26062 1 9606 Homo sapiens 0.06261802243034253 LQDLVNR Unmodified 856.47667 0.47666558 563;3927 A0A024R9B5;B4DMM7;Q15291;B4DLF8;Q15291-2 RBBP5 Retinoblastoma-binding protein 5 no no 0 0 0 7 0 1 47.442 47.53 2 0.084283 12441 20230619_1887_Aki_TMTPro18x_K_F7 68.214 32.965 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17132 563;3927 16234 32541 26063 26063 1 9606 Homo sapiens 0.04268631583227034 LQDMLDGFIK Unmodified 1178.6005 0.60054547 406 A0A024R6Q1;P55010;Q6IBU0;H0YLZ1;Q32Q19;Q05DF3;H0YN40;H0YMJ8;H0YM54 EIF5 Eukaryotic translation initiation factor 5 yes no 0 0 0 8 0 1 64.435 64.456 2 0.001013 19736 20230619_1888_Aki_TMTPro18x_K_F8 125.74 65.304 31993 24982 27728 26157 21653 35776 34185 30990 36468 39724 42227 49312 49983 38173 37449 54565 47544 60355 29542 22889 28442 26460 23410 35315 33810 32227 37261 39963 43430 49245 50148 40634 38958 54832 45481 57217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219380000 17133 406 16235 32542 26064 26064 1 9606 Homo sapiens 0.018389215685601812 LQDSGTFQCVAR Unmodified 1380.6456 0.64559818 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-5;Q13308-3;Q59FV9;Q86X91;B7Z471;F8WDG7;C9J9E8 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 6.5 0.5 1 1 45.733 45.819 2 2.6735E-13 12044 20230619_1886_Aki_TMTPro18x_K_F6 236.42 205.34 196830 151510 162910 159690 172020 204640 183490 189710 230180 237780 267610 312350 268390 228530 268620 285320 288930 305110 181680 138840 168440 161280 178540 203200 185840 196090 233360 239940 273170 310720 273910 241460 274360 286880 276360 289530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199160000 17134 3847 16236 32543;32544 26065;26066 26065 2 9606 Homo sapiens -0.029498796362304347 LQDVADSFK Unmodified 1021.508 0.50802529 3613 P49792;A0A8V8TLN4;A0A8V8TMN6;A6NKT7;J3KNE0;Q7Z3J3;A0A8Q3SIN4;B4DYH0;F8VYC4;A0A286YES2;Q99666;O14715;P0DJD1;P0DJD0;A0A8Q3SII4;A0A8Q3SII5;J3KQ37;V9HWE4;B4DTT2;B4E0M7;B4DTM4 RANBP2;RGPD3;RGPD4;RGPD1;RGPD5;RGPD8;RGPD2;HEL161 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 1 yes no 0 0 0 6 0 1 56.654 56.726 2 0.012944 16807 20230619_1886_Aki_TMTPro18x_K_F6 87.298 57.113 35666 26621 28463 35110 32506 36434 35414 34587 38066 42568 39044 40000 45546 40215 32344 56788 47207 47654 32906 24450 29616 34764 33544 36696 35619 35679 38709 42514 40290 40758 45678 42334 34079 56213 45026 45357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20379000 17135 3613 16237 32545 26067 26067 1 9606 Homo sapiens -0.0018684017333043812 LQDVADSFKK Unmodified 1149.603 0.60298831 3613 P49792;A0A8V8TLN4;A0A8V8TMN6;A6NKT7;J3KNE0;Q7Z3J3;A0A8Q3SIN4;B4DYH0;F8VYC4;A0A286YES2;Q99666;O14715;P0DJD1;P0DJD0;A0A8Q3SII4;A0A8Q3SII5;J3KQ37;V9HWE4;B4DTT2;B4E0M7;B4DTM4 RANBP2;RGPD3;RGPD4;RGPD1;RGPD5;RGPD8;RGPD2;HEL161 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 1 yes no 0 0 1 1 0 1 53.23 53.23 3 0.00024488 15699 20230619_1880_Aki_TMTPro18x_K_F1 117.86 63.794 88328 75649 92412 91378 94950 106130 94915 103430 111150 109650 112840 105820 109450 84033 96801 117360 110160 101640 81730 69380 93563 91206 98441 106140 96259 105980 112400 110350 115480 106910 111160 89183 99507 116470 105210 96740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295230000 17136 3613 16238 32546 26068 26068 1 9606 Homo sapiens 0.034170932978668134 LQEAGILSAEELQR Unmodified 1555.8206 0.82058566 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0 PLEC;PLEC1 Plectin yes no 0 0 0 4 0 1 57.02 57.025 2 3.4921E-06 17077 20230619_1883_Aki_TMTPro18x_K_F4 148.96 110.87 16234 13891 16378 17332 18743 19430 20748 20631 22934 20368 20469 19747 21988 19899 19698 28814 23436 25542 15016 12744 16667 17251 19324 19518 20867 20984 23140 20585 21180 20106 22299 20984 20329 28599 22402 24287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13231000 17137 3921 16239 32547 26069 26069 1 9606 Homo sapiens 0.06490818709835366 LQEALNLFK Unmodified 1074.6073 0.6073454 1073 A0A0S2Z3H8;A0A7I2V5R6;Q5JWF2;Q5JWF2-2;P63092-4;P63092-3;P63092;P63092-2;Q5JWE9;A0A0S2Z3S5;Q14455;A0A590UJQ9;A0A590UK28;A0A804HIH4;B0AZR9;A0A0A0MR13;A0A590UJF0;A0A590UJS2;A0A590UJY2;O60726 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short yes no 0 0 0 3 0 1 63.36 63.391 2 0.000117 19854 20230619_1882_Aki_TMTPro18x_K_F3 152.86 87.797 127560 103430 117350 145600 109370 145590 142470 157850 167990 166580 160090 153840 165560 150590 148320 195930 143920 161760 117870 95028 120150 143510 115370 147390 142550 160600 169400 167490 164810 156740 168030 157760 151170 194120 137860 153940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187120000 17138 1073 16240 32548 26070 26070 1 9606 Homo sapiens 0.0730260251141317 LQEEERER Unmodified 1087.5258 0.52580062 3066 H3BNC9;P08708;H0YN88;A0A075B716 RPS17 40S ribosomal protein S17 yes no 0 0 1 1 0 1 28.849 28.849 3 0.013374 5487 20230619_1880_Aki_TMTPro18x_K_F1 75.825 22.331 10803 7743.4 14997 10830 18167 17731 13177 16034 16296 12476 19204 18441 14537 14675 17220 7236.9 14862 16545 10013 7117.7 14902 10780 18462 17367 13689 16389 16521 12985 19360 18311 15120 14869 17278 7948.9 14255 15609 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 422300000 17139 3066 16241 32549 26071 26071 1 9606 Homo sapiens -0.014461249184705594 LQEEITK Unmodified 859.4651 0.46509784 1976 A6NJA2;B2RD79;P54578-2;P54578-3;P54578;D3DUG9;B3KTG4;H0YA47 USP14;RUFY1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 4 0 1 46.24 46.283 2 0.023847 12294 20230619_1883_Aki_TMTPro18x_K_F4 100.02 13.184 159910 87946 165540 189660 192560 218590 182430 192100 241950 191470 262030 328300 295560 270790 233170 204480 369610 442890 147610 81442 168240 183320 197730 218020 186420 198130 243700 197820 269730 324790 297880 277940 245560 219940 352830 417870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112170000 17140 1976 16242 32550 26072 26072 1 9606 Homo sapiens 0.02974389769235586 LQEELSENDK Unmodified 1203.5619 0.56191135 128 O95347;A0A024R158;B7ZLZ7;A8K984;O95347-2;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1;A0JLM9;Q32Q15;Q05D74;Q5T821 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 1 0 1 47.421 47.421 3 0.00022449 13323 20230619_1880_Aki_TMTPro18x_K_F1 117.14 98.868 26529 24092 31465 27180 34431 37317 32256 33684 40064 35144 44367 43083 45412 40833 36481 38373 56843 48661 24586 22077 31569 27344 35463 36890 32907 34690 40523 35698 45341 43307 45924 42067 38381 39176 54134 46140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56435000 17141 128 16243 32551 26073 26073 1 9606 Homo sapiens -0.03172712532295918 LQEEMLQR Oxidation (M) 1061.5175 0.51754412 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 1 0 2.5 0.5 1 1 38.751 38.812 2 0.018522 9181 20230619_1881_Aki_TMTPro18x_K_F2 85.161 50.988 355560 218920 266250 279570 687530 861850 543610 519030 814080 591510 716260 780280 731460 654200 584310 687450 688610 774760 327590 201180 284580 284550 678510 818960 564090 555320 809490 600550 740290 779080 739360 680570 603110 694940 658450 734630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 860560000 17142 3414 16244 32552;32553 26074;26075 26074 2031 2 9606 Homo sapiens -0.01075395159477921 LQEEMLQR Unmodified 1045.5226 0.5226295 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 0 0 3 0.816 1 1 1 45.555 45.622 2 0.00106 12122 20230619_1882_Aki_TMTPro18x_K_F3 149.91 89.205 1587400 1009900 1170600 1117800 2331300 3559600 2169800 2042500 3110900 2688400 2663100 3200100 3150600 2870100 2360900 3135300 3069800 3103200 1462600 926600 1242700 1150700 2336100 3376300 2223600 2206200 3098200 2701000 2777300 3212200 3164700 2984100 2458000 3142700 2930500 2947600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3649599999.9999995 17143 3414 16244 32554;32555;32556 26076;26077 26076 2 9606 Homo sapiens 0.0016890870315364737 LQEEMLQREEAENTLQSFR Oxidation (M) 2366.1172 0.11723796 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 1 1 2.5 1.12 1 1 1 1 52.283 52.315 3 1.6922E-24 15142 20230619_1882_Aki_TMTPro18x_K_F3 203.82 192.95 396110 358320 360400 324910 737280 705490 526340 564660 577340 569700 599690 556380 586710 493630 548070 655760 574500 585470 366240 327760 374420 336100 729600 681730 544420 586040 586610 575170 613380 563700 597330 519770 560080 652130 549500 556790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2227000000 17144 3414 16245 32557;32558;32559;32560 26078;26079;26080 26079 2031 3 9606 Homo sapiens -0.011175967062172276 LQEEMLQREEAENTLQSFR Unmodified 2350.1223 0.12232334 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 0 1 4 1.22 1 2 2 2 1 55.435 55.476 3;4 6.1881E-61 16535 20230619_1882_Aki_TMTPro18x_K_F3 310.92 286.64 788550 690190 698240 600040 1082600 1280400 1003700 1044700 1082600 1124800 1006500 1000200 1170900 988600 1037800 1305900 949850 1109200 728770 631200 722250 622950 1092800 1237800 1018800 1084400 1096600 1128900 1043500 1021100 1183300 1036800 1054400 1295500 910770 1055000 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5749600000 17145 3414 16245 32561;32562;32563;32564;32565;32566;32567;32568 26081;26082;26083;26084;26085 26082 5 9606 Homo sapiens 0.0012670715636886598 LQEENHQLR Unmodified 1165.584 0.5839842 3040 Q5GIA6;H0YD93;Q8WXA3-5;Q8WXA3-4;Q8WXA3;Q8WXA3-3;Q8WXA3-1 RUFY2 RUN and FYVE domain-containing protein 2 yes no 0 0 0 2.5 0.5 1 1 31.568 31.638 3 4.2602E-05 6354 20230619_1881_Aki_TMTPro18x_K_F2 149.27 90.289 23357 14465 19803 24393 19212 20405 18814 17878 21589 20509 20744 24407 22456 24092 21599 18437 29793 25328 21538 13336 20425 23744 19999 20870 19086 18531 21809 20714 21427 24563 22868 24550 22409 19020 28395 24000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21737000 17146 3040 16246 32569;32570 26086 26086 1 9606 Homo sapiens 0.007815567267925871 LQEEQFVNAVE Unmodified 1304.6248 0.62484596 4215 Q8IYS1 PM20D2 Peptidase M20 domain-containing protein 2 yes yes 0 0 0 1.5 0.5 1 1 59.926 59.932 2 0.001272 18624 20230619_1881_Aki_TMTPro18x_K_F2 97.565 79.405 62686 50302 58872 60624 53155 66682 57387 60428 72090 66295 65215 68490 77296 58996 65215 76676 74853 73123 57927 46143 60049 60461 55876 66812 58098 62319 72345 66768 67777 69114 77896 62130 67121 76536 71514 69497 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150650000 17147 4215 16247 32571;32572 26087;26088 26088 2 9606 Homo sapiens -0.015281467442491703 LQEIFTEK Unmodified 1006.5335 0.53351176 2852 Q9P2W9;D6RF48 STX18 Syntaxin-18 yes no 0 0 0 6 0 1 58.476 58.541 2 0.0022709 17520 20230619_1886_Aki_TMTPro18x_K_F6 129.38 68.623 46357 36703 41046 48632 49960 60081 48407 47823 57216 62414 59133 61170 70745 50886 54067 68487 62738 65697 42815 33703 42323 48254 51211 59587 49171 50091 57927 62259 61085 61800 70980 53803 55831 68340 59963 62418 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31172000 17148 2852 16248 32573 26089 26089 1 9606 Homo sapiens 0.030506343490856125 LQEKEDLQELNDR Unmodified 1628.8006 0.8005785 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;Q8N519;A0A6Q8PF80;A0A6Q8PGH0;A0A6Q8PF59;A0A6Q8PFM1;W5X314 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 1 2.5 0.5 1 1 46.805 46.882 3 2.2703E-15 12731 20230619_1882_Aki_TMTPro18x_K_F3 196.95 172.03 176330 174730 261420 269820 467740 286130 497950 375430 146970 252550 335690 68022 34468 27491 533600 16587 24365 20409 163910 160610 261560 264900 467230 290610 489180 374250 177190 255640 321620 76740 67744 29331 502890 18732 28208 19359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 258450000 17149 1428 16249 32574;32575 26090 26090 1 9606 Homo sapiens 0.011330229791838065 LQELEGAVK Unmodified 985.54441 0.5444108 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 0 4 0 1 54.547 54.563 3 0.068793 16079 20230619_1883_Aki_TMTPro18x_K_F4 42.802 13.329 38749 32552 40534 41032 33439 46969 42131 41563 50334 51979 46811 47814 55037 47477 45551 55304 50687 56152 35850 29869 40937 40818 35612 46894 42239 43111 50702 51859 48555 48712 55468 49405 46826 55470 48485 53305 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59481000 17150 3549 16250 32576 26091 26091 1 9606 Homo sapiens 0.05106036723384477 LQELPDAVPHGEMPR Unmodified 1687.8352 0.83518986 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;B1AHB2 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 3.5 0.5 1 1 50.001 50.056 3 1.1112E-07 13942 20230619_1883_Aki_TMTPro18x_K_F4 128.64 107.08 145460 111980 130320 123130 117920 138040 126250 123160 156430 195750 175840 181690 209950 164790 152840 204840 184720 207870 134340 102650 133410 123690 123840 138150 127810 128780 158690 193480 180960 184450 210390 172760 158470 205210 176590 197320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 504670000 17151 2188 16251 32577;32578 26092 26092 1 9606 Homo sapiens 0.018785675862773132 LQELSAEER Unmodified 1073.5353 0.53530267 3129 J3KQ32;Q9NTK5;Q53SQ6;Q9NTK5-2 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 0 1.5 0.5 1 1 44.06 44.101 2 4.6731E-06 11892 20230619_1880_Aki_TMTPro18x_K_F1 206.43 166.16 510600 404020 444780 490390 527470 544490 505830 492350 622910 578590 636050 641000 658750 543370 529480 677940 728420 644680 471530 370660 458740 488830 540810 545460 514900 508990 628450 582160 652810 644700 665550 570810 552440 676830 694450 612980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 728760000 17152 3129 16252 32579;32580 26093;26094 26093 2 9606 Homo sapiens 0.001476433670404731 LQESCSVCLAGLDGFR Unmodified 1810.8342 0.83420359 4756 Q9Y6C2 EMILIN1 EMILIN-1 yes yes 0 0 0 6.5 0.5 1 1 60.342 60.392 3 8.9271E-06 17974 20230619_1887_Aki_TMTPro18x_K_F7 105 91.936 20547 21550 24504 23239 26029 26893 23692 25688 29461 29706 31939 37569 31234 32590 38713 34631 34164 43475 19063 19730 24573 23392 26836 26904 24219 26430 29794 30046 32679 37594 32291 33871 38964 35277 32796 41165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50854000 17153 4756 16253 32581;32582 26095 26095 1 9606 Homo sapiens -0.03878014844917743 LQESPEDMPAGQTPHTVILFAHNDLVDK Unmodified 3101.5128 0.51279968 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3ITP6;A0A8V8TKP2 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 6 0 1 57.849 57.918 4 9.811099999999998E-21 17254 20230619_1886_Aki_TMTPro18x_K_F6 161.24 147.78 23708 19432 19654 22107 19913 21187 22974 23181 25804 32276 31195 27801 33584 25515 27681 36956 27002 31644 21892 17814 20320 22101 20751 21550 23081 23784 26375 31982 31828 28369 33891 27011 28269 36627 25874 30094 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 371130000 17154 471 16254 32583 26096 26096 1 9606 Homo sapiens 0.04610378904862955 LQETSSQSYVEEQK Unmodified 1654.7686 0.76860967 2595 B4DUT2;A0A024R7C4;A0A494C108;Q8N9T8;B7ZLF4;B4DUY9;H0YFD2;F8WFC1 FLJ12949;KRI1 Protein KRI1 homolog yes no 0 0 0 3.5 0.5 1 1 45.392 45.452 3 5.3472E-07 12057 20230619_1882_Aki_TMTPro18x_K_F3 134.88 119.12 83092 63811 81881 91096 94287 107730 98977 93762 118240 112460 129730 121990 130560 113930 107630 122860 141150 139080 76794 58652 83532 89926 97133 107320 100110 97268 119790 112990 132510 123170 132180 118280 111780 124190 134720 131930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 245270000 17155 2595 16255 32584;32585 26097;26098 26097 2 9606 Homo sapiens -0.032583894946128567 LQEVECEEQR Unmodified 1318.5823 0.58232922 3862 Q59GU6;Q53HL9;Q53GY8;Q13596;Q13596-2;Q13596-3;H0YK42 SNX1 Sorting nexin-1 yes no 0 0 0 1 0 1 41.433 41.433 2 1.5069E-06 10721 20230619_1880_Aki_TMTPro18x_K_F1 172.26 154.35 82748 58141 72101 72081 92696 86360 85268 81619 100520 97831 98907 90404 111940 98784 80382 100450 127670 115380 76366 53379 74415 71847 94374 86183 86867 84132 101520 97817 102030 92422 112400 101740 85002 101690 121610 109470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99421000 17156 3862 16256 32586 26099 26099 1 9606 Homo sapiens -0.06421865144147887 LQEVFGHAIK Unmodified 1140.6291 0.62914348 3650 P54136;P54136-2;E5RJM9;E5RH09 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 1.5 0.5 1 1 53.347 53.364 3 0.00020911 15727 20230619_1880_Aki_TMTPro18x_K_F1 117.98 70.778 191900 172800 193890 214800 181710 190550 212940 216990 228410 230790 226650 221370 243820 197940 223540 273390 233350 233860 177570 158500 196730 213190 190440 195180 213440 220250 231820 232160 233360 224490 247280 208930 228490 271160 223170 222530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 812590000 17157 3650 16257 32587;32588 26100 26100 1 9606 Homo sapiens 0.0644540725998013 LQEVPHEGPMCDLLWSDPDDR Oxidation (M) 2524.0999 0.099873339 1200 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;P67775;B3KUN1;A0A8V8TQA1;A0A8V8TRB3;B3KQ51;A0A8V8TQU8;E5RHC1;H0YC23 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes no 0 1 0 2.5 1.12 1 1 1 1 56.209 56.225 3 8.7379E-13 17104 20230619_1881_Aki_TMTPro18x_K_F2 144.4 137.04 55782 45791 54424 57048 56942 60891 61484 59953 62506 69809 65309 65590 66057 64413 64423 72641 67484 74285 51571 42016 55451 56742 59044 61269 61773 61578 63788 69886 66924 66733 67373 66891 65756 72938 64586 70514 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 95008000 17158 1200 16258 32589;32590;32591;32592 26101;26102;26103 26102 734 3 9606 Homo sapiens -0.10121260303594681 LQEVPHEGPMCDLLWSDPDDR Unmodified 2508.105 0.10495872 1200 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;P67775;B3KUN1;A0A8V8TQA1;A0A8V8TRB3;B3KQ51;A0A8V8TQU8;E5RHC1;H0YC23 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes no 0 0 0 2.5 0.5 1 1 61.054 61.074 3 5.4705E-30 18856 20230619_1882_Aki_TMTPro18x_K_F3 202.43 194.62 101010 73983 98828 100780 78866 106920 95226 96579 108710 128330 113350 119280 134720 104540 115380 127340 126700 142940 93326 67979 100300 99640 84114 107350 95540 100230 110310 127690 117050 120950 135830 109620 118360 128430 121220 135540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 645570000 17159 1200 16258 32593;32594 26104;26105 26105 2 9606 Homo sapiens -0.08876956440963113 LQEYLGK Unmodified 849.45962 0.45961853 4130 Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A8I5KSP1 LARP1 La-related protein 1 yes no 0 0 0 8 0 1 53.379 53.454 3 0.010218 15041 20230619_1888_Aki_TMTPro18x_K_F8 92.47 43.112 91669 67081 81088 83658 90135 85626 87771 81756 101820 102290 112650 112440 116100 96199 92837 125840 121290 108990 84627 61579 83378 83158 92778 86397 89082 84372 103390 102600 115190 113180 117290 101310 96562 124950 115690 103750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80348000 17160 4130 16259 32595 26106 26106 1 9606 Homo sapiens 0.028867109774296296 LQFIADHCPTLR Unmodified 1469.7449 0.74491829 2750 Q13098-7;Q13098;Q13098-5;C9JFE4;A8K070;A0A096LPJ3;A0A096LP07;B4DND6;J3KSA5;J3QS84;J3KRE8;J3KRJ4;J3QL53;J3QLT0;J3QLE8;J3KTB0;J3QS88 GPS1 COP9 signalosome complex subunit 1 yes no 0 0 0 1.5 0.5 1 1 51.598 51.621 3 1.0717E-31 15173 20230619_1881_Aki_TMTPro18x_K_F2 241.35 161.11 128200 108080 123750 124120 107490 122280 129340 132250 145700 153520 137660 132220 164670 125940 125920 174280 147960 150760 118530 99076 125840 124070 113570 124040 129700 134970 147290 153340 142730 135050 165290 132730 130210 172900 141370 143430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 294490000 17161 2750 16260 32596;32597 26107;26108 26108 2 9606 Homo sapiens 0.02883563048499127 LQFLTSK Unmodified 835.48035 0.48035398 4249 Q8ND82;Q9UJJ2 ZNF280C Zinc finger protein 280C yes no 0 0 0 4 0 1 56.845 56.85 2 0.014942 16963 20230619_1883_Aki_TMTPro18x_K_F4 116.73 34.942 94892 85254 86978 94061 102950 123980 104180 85115 109560 74242 66818 62721 79403 63700 82722 78033 81573 79480 87738 78109 89312 94645 105800 122210 105070 89410 109550 75388 71131 64269 80794 66473 83966 78282 78045 75483 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20072000 17162 4249 16261 32598 26109 26109 1 9606 Homo sapiens 0.05603301357075452 LQFPLPTAQR Unmodified 1169.6557 0.65569258 3624 V9HWE7;P51570;Q6ZP37;Q71UH7;K7EII7;K7ERJ9;B4E1A8;K7ERN9;E5LAN0;D1MI96 HEL-S-19;GALK1;GALK Galactokinase yes no 0 0 0 4 0 1 56.551 56.556 2 0.0016711 16890 20230619_1883_Aki_TMTPro18x_K_F4 104.2 52.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17163 3624 16262 32599 26110 26110 1 9606 Homo sapiens 0.07765096151297257 LQGDANNLHGFEVDSR Unmodified 1770.8285 0.82852458 2758 C9JLU1;P52434;P52434-3;P52434-2;P52434-5 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes no 0 0 0 3.5 0.5 1 1 46.318 46.379 3 1.7649999999999999E-19 12499 20230619_1882_Aki_TMTPro18x_K_F3 207.79 190.57 511580 400660 516600 516120 585000 634250 592480 605010 711550 553770 576900 578520 593830 444570 574150 632720 634130 648890 472960 367820 525390 513310 602460 631660 600610 618610 712400 563370 599040 581880 604320 473260 587820 633480 606260 616090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 805320000 17164 2758 16263 32600;32601 26111;26112 26111 2 9606 Homo sapiens -0.026056540407580542 LQGEFQLR Unmodified 989.52943 0.52942943 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 6.5 0.5 1 1 49.943 50.024 2 0.0017044 13594 20230619_1887_Aki_TMTPro18x_K_F7 150.4 93.221 303930 269600 286880 313550 282850 329760 332720 340060 355070 345280 333330 334400 352880 302600 359050 376540 377730 351300 281060 247140 292980 313320 295610 332460 333330 346810 359670 348320 343980 338960 359870 317070 366110 375770 361050 334030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 523950000 17165 3881 16264 32602;32603 26113;26114 26114 2 9606 Homo sapiens 0.034245896460333825 LQGEVVAFDYQSK Unmodified 1482.7355 0.73545904 3164 K7ELG9;Q3MHD2;Q3MHD2-2;B4DUG4 LSM12 Protein LSM12 homolog yes no 0 0 0 6 0 1 57.637 57.706 2 1.3813E-12 17158 20230619_1886_Aki_TMTPro18x_K_F6 198.49 171.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17166 3164 16265 32604 26115 26115 1 9606 Homo sapiens 0.013400732440004504 LQGIDLDR Unmodified 928.49779 0.49779495 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7 RAD50 DNA repair protein RAD50 yes no 0 0 0 4 0 1 49.139 49.177 2 0.0096905 13607 20230619_1883_Aki_TMTPro18x_K_F4 100.98 42.268 223890 175180 185070 192140 197500 248380 248650 218290 255470 261400 245200 275390 275550 223190 267490 335900 304290 314410 206670 160580 191540 193440 205830 246180 247840 226270 259580 262300 253670 277200 279880 237920 274560 334300 290860 298820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 300680000 17167 4309 16266 32605 26116 26116 1 9606 Homo sapiens 0.030685968920806772 LQGPEEQCAR Unmodified 1186.5401 0.54007047 3669 P56730 PRSS12 Neurotrypsin yes yes 0 0 0 2 0 1 35.819 35.876 2 0.00024204 7926 20230619_1881_Aki_TMTPro18x_K_F2 135.72 122.13 21938 18776 29588 26432 25141 24782 25699 28832 41375 49894 42921 56435 65186 40277 37732 42039 53648 46777 20350 17248 29327 26052 26467 25286 26386 29728 41403 49468 44990 56345 64420 42246 39745 42477 51129 44404 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74827000 17168 3669 16267 32606 26117 26117 1 9606 Homo sapiens -0.04573795761848487 LQGPQTSAEVYR Unmodified 1347.6783 0.67827852 4227 Q8N335;B3KWN2 GPD1L Glycerol-3-phosphate dehydrogenase 1-like protein yes no 0 0 0 5.5 0.5 1 1 42.553 42.641 2 1.0053E-12 10601 20230619_1886_Aki_TMTPro18x_K_F6 204.17 150.62 83146 74541 76947 81606 91009 101770 87162 80879 88778 112350 156570 160360 125920 129170 144790 132720 159910 163950 76881 68289 78919 82105 93330 100940 88209 84950 93053 113280 156170 159530 130510 134370 147670 135120 152890 155380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122270000 17169 4227 16268 32607;32608 26118;26119 26119 2 9606 Homo sapiens 0.01834650758269163 LQGQLEQGDDTAAER Unmodified 1629.7594 0.75944196 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 1 0 1 42.027 42.027 2 1.0655E-24 10994 20230619_1880_Aki_TMTPro18x_K_F1 225.97 201.67 20781 15180 21373 18818 16572 21544 21111 19636 23640 28345 27657 31095 31664 22749 22712 32827 29730 32876 19207 13934 21578 18749 17740 21528 21110 20428 24125 28251 28375 31147 31739 24292 23697 32796 28399 31214 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41212000 17170 1296 16269 32609 26120 26120 1 9606 Homo sapiens -0.030247380602759222 LQGVGALGQAASDNSGPEDAK Unmodified 1983.9498 0.94976193 1668 A0A7I2V4T6;A0A7I2V6B0;J3KN36;Q5JPE7-2;P69849;Q5JPE7;A0A7I2V3P4;A0A7I2V2Z5;Q5JPE7-3;Q1LZN2;A0A087WTD5 NOMO3;NOMO2 Nodal modulator 2;Nodal modulator 3 yes no 0 0 0 4.5 0.5 1 1 52.422 52.47 3 6.2411E-08 15138 20230619_1883_Aki_TMTPro18x_K_F4 102.67 90.878 45095 34852 38593 40356 49286 57361 47185 51525 66970 56276 62698 68770 80426 68051 56000 81490 76074 77238 41634 31964 39920 40530 50369 56573 48308 53140 66922 57041 65313 69251 80378 70916 58622 81362 72601 73402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56948000 17171 1668 16270 32610;32611 26121 26121 1 9606 Homo sapiens -0.0028549618871238636 LQHAAELIK Unmodified 1021.592 0.59202969 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B4DHD2;B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 8 0 1 46.537 46.586 3 3.4845E-05 12112 20230619_1888_Aki_TMTPro18x_K_F8 128.81 53.517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17172 3981 16271 32612 26122 26122 1 9606 Homo sapiens 0.08209735714240196 LQHCMELTDLMR Unmodified 1545.7102 0.71018905 850 Q9H5X7;A0A087WXU0;A0A804HHY2;A0A804HHW6;Q9NWS8-2;Q9NWS8 RMND1 Required for meiotic nuclear division protein 1 homolog yes no 0 0 0 7 0 1 53.224 53.294 3 3.7245E-13 15060 20230619_1887_Aki_TMTPro18x_K_F7 172.99 138.99 32868 28990 33901 31865 38597 42529 40335 38632 54272 31550 27272 26993 34572 26956 31486 33309 34893 36847 30415 26561 34413 32100 39784 42112 40971 39539 53371 32181 29571 27622 34907 28169 32268 33560 33366 34953 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98575000 17173 850 16272 32613 26123 26123 1 9606 Homo sapiens -0.04083764146116664 LQHPDMLVTK Unmodified 1180.6274 0.62742892 1013 B3KUB6;A0A0C4DH22;A0A1B0GTW6;Q9H4G0-4;Q9H4G0-3;Q9H4G0-2;Q9H4G0;Q29RW3;H0Y482 EPB41L1 Band 4.1-like protein 1 yes no 0 0 0 8 0 1 46.341 46.379 3 0.038299 12040 20230619_1888_Aki_TMTPro18x_K_F8 57.802 39.766 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17174 1013 16273 32614 26124 26124 1 9606 Homo sapiens 0.044340301797319626 LQIASDENYKDPTNLQGK Unmodified 2033.0065 0.006548526 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;B4DGT1;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 6.33 0.471 2 1 52.057 52.133 3 7.8543E-14 14536 20230619_1887_Aki_TMTPro18x_K_F7 159.88 147.03 157380 136020 170600 167510 155460 173130 187150 175280 160300 216220 218480 181870 185590 141140 226480 160930 158460 109450 145680 124770 171970 166700 163380 174710 186120 180020 167340 215110 219850 184780 192150 148000 225450 158800 151930 104680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284720000 17175 1022;3868 16274 32615;32616;32617 26125;26126 26126 2 9606 Homo sapiens 0.03136551367788343 LQIDEQLR Unmodified 1013.5506 0.55055881 1029;1885;1771 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;P51114-3;B4DM21;B4DM78;B4DGH9;E7EU85;A0A8I5KT56;Q06787-6;R9WQY1;A8MQB8;A0A8I5KZ21;G3V0J0;X5D907;Q06787-5;Q06787-4;Q06787-7;Q06787-2;Q06787-8;A0A087WXI3;A0A087WVL8;A0A8I5KS01;X5DQX7;A0A8I5KWH0;W5ZQ92;A0A087WY29;R9WNI0;A0A8I5KTZ9;Q06787-3;Q06787-9;Q06787;A0A8I5KUC2;B4DZ17;A0A8I5KTT6;B4DFH8;Q59GC1;A0A994J7P9;P51116 FXR1;FMR1;FXR2 Fragile X mental retardation syndrome-related protein 1;Fragile X mental retardation protein 1;Fragile X mental retardation syndrome-related protein 2 no no 0 0 0 3.5 0.5 1 1 47.842 47.921 2 3.3482E-09 13000 20230619_1883_Aki_TMTPro18x_K_F4 188.98 58.938 397310 342120 352000 396950 347250 432730 421480 400450 466620 463600 439140 467900 504310 402060 413340 561150 485460 494390 367150 313640 361630 396860 363570 434070 422010 413100 471880 465300 454850 472650 508210 425340 426720 557160 463850 470250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 316090000 17176 1029;1771;1885 16275 32618;32619 26127;26128 26128 2 9606 Homo sapiens 0.044325549548943854 LQIELGK Unmodified 799.48035 0.48035398 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 LMNB1 Lamin-B1 yes no 0 0 0 7.67 0.471 1 2 53.913 53.983 2 0.0039932 15255 20230619_1887_Aki_TMTPro18x_K_F7 151.27 0 801060 661550 746600 773440 655160 778740 899620 892660 994520 974680 1028700 1020300 1068900 902250 921940 1070400 1103100 1061900 740340 606620 761920 772330 694840 789640 895890 906240 1009000 981910 1055400 1029900 1082700 943490 950870 1072100 1053400 1008900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4542500000 17177 3482 16276 32620;32621;32622 26129;26130 26129 2 9606 Homo sapiens 0.07259301357089498 LQINQSIIFCNSSQR Unmodified 1806.9047 0.90466641 2256 P26196;B2R858 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 0 5 0 1 57.96 58.016 3 4.4576E-14 17083 20230619_1885_Aki_TMTPro18x_K_F5 179.33 157.7 34476 29804 36103 33540 34200 42368 39294 38525 37914 31757 33056 34075 35103 29764 38434 37833 36462 39382 31903 27315 36502 33697 35830 42077 39289 39441 38495 32536 34261 34357 35920 31274 38912 37977 34925 37378 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74679000 17178 2256 16277 32623 26131 26131 1 9606 Homo sapiens 0.033490265350565096 LQIQCVVEDDK Unmodified 1345.6548 0.65476588 2288;2925;271 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;H0YE58;P29692;P29692-3;E9PK01;P29692-4;E9PQZ1;A0A024R3W7;P24534;A4D1M6 EEF1D;EEF1B2;LOC392793 Elongation factor 1-delta;Elongation factor 1-beta no no 0 0 0 3 0.816 1 1 1 55.434 55.46 2;3 6.5786E-23 16379 20230619_1883_Aki_TMTPro18x_K_F4 252.16 197.55 153220 95365 88614 121140 78098 138470 105300 123280 215380 176160 152240 277970 301110 282610 103680 475880 225300 567470 140970 87624 95483 120380 83514 138210 107950 128410 210730 178500 166240 277910 293580 301570 117840 478870 216760 536760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 245570000 17179 2288;2925;271 16278 32624;32625;32626 26132;26133 26133 2 9606 Homo sapiens -0.004235310705780648 LQISHEAAACITGLR Unmodified 1638.8512 0.85117428 3811 Q08211;B3KU66;Q08211-2 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 1.5 0.5 1 1 50.233 50.258 3 3.3915E-33 14556 20230619_1881_Aki_TMTPro18x_K_F2 208.51 143.84 922690 802690 919670 1013000 958730 1073700 1136400 1133700 1218400 1244200 1093300 1130200 1347900 1103700 989860 1458300 1364000 1360900 853500 736460 935790 1006600 997510 1082500 1138000 1156800 1232500 1248000 1138700 1152000 1350700 1158300 1036100 1452800 1301400 1293600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5352500000 17180 3811 16279 32627;32628 26134;26135 26135 2 9606 Homo sapiens 0.05730273823178322 LQIVEMPLAHK Unmodified 1277.7166 0.71657828 346 P50454;A0A024R5K8;A8K259;B4DN87;E9PJH8;E9PKH2;E9PPV6;E9PR70;Q9NPA9 SERPINH1;ra-a47 Serpin H1 yes no 0 0 0 2 0 1 56.008 56.026 3 7.8645E-05 17021 20230619_1881_Aki_TMTPro18x_K_F2 122.45 88.703 106370 86672 94826 117520 109900 139490 297650 297690 329890 160640 153400 195400 188790 167640 199560 218170 182240 213570 98271 79600 97895 116570 118080 142820 289750 289340 326480 170850 167640 195930 192200 176440 201900 218120 174750 202780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 646860000 17181 346 16280 32629 26136 26136 1 9606 Homo sapiens 0.08882865139207752 LQIWDTAGQESFR Unmodified 1549.7525 0.75250609 473;4277 A0A024R7V6;P61019;P61019-2;E9PKL7;Q8WUD1;A0A3B3ITL1;Q5HYI5;B4DUD4 RAB2;RAB2A;RAB2B;DKFZp313C1541 Ras-related protein Rab-2A;Ras-related protein Rab-2B no no 0 0 0 6.2 0.748 1 2 2 59.568 59.622 2;3 8.8111E-28 17937 20230619_1886_Aki_TMTPro18x_K_F6 304.57 248.56 153400 125060 139810 151960 137540 157870 153220 159720 165080 177560 169680 176120 184790 159920 170260 198060 178340 199260 141740 114730 143200 151350 143540 159230 154010 163500 167800 178410 174590 178320 187450 167510 174000 198400 170700 189170 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1093700000 17182 473;4277 16281 32630;32631;32632;32633;32634 26137;26138 26137 2 9606 Homo sapiens -0.0003800615020281839 LQKEEEIEFLYNENTVR Unmodified 2153.0641 0.064063405 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2;A0A804HK69;A0A804HKU1 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 1 3 0.816 1 1 1 58.828 58.858 3 1.883E-19 17932 20230619_1882_Aki_TMTPro18x_K_F3 193.19 169.18 92769 76785 88663 93238 73712 90309 92523 84194 85297 114790 115380 114490 111640 94713 128220 112940 107310 110110 85755 70434 90221 92779 78296 91400 92021 87299 88616 114300 116860 115530 114800 99314 128860 113110 102900 104600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268650000 17183 1736 16282 32635;32636;32637 26139;26140;26141 26140 3 9606 Homo sapiens 0.03365393573358233 LQKPTDSTASSR Unmodified 1289.6575 0.65754307 3190 M0QY97;Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 0 0 1 8 0 1 36.45 36.436 3 0.00016845 8062 20230619_1888_Aki_TMTPro18x_K_F8 107.93 84.177 22203 13243 27701 31418 49159 53371 34955 41869 40907 29366 47750 50820 41426 36561 42488 19975 44673 45470 20537 12279 28026 30469 48969 51995 36269 43207 41557 31016 48416 50094 42530 37324 43178 21846 42728 42915 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24153000 17184 3190 16283 32638 26142 26142 1 9606 Homo sapiens 0.02430060378583221 LQLDNQYAVLENQK Unmodified 1674.8577 0.85769944 4680 Q9UKY7;A0A8I5KX85;D3DND1;D6R9V8 CDV3 Protein CDV3 homolog yes no 0 0 0 6 0 1 57.451 57.523 3 2.4905E-22 17076 20230619_1886_Aki_TMTPro18x_K_F6 188.13 158.64 100800 92360 100370 110080 95761 122370 111110 102160 119240 137240 128920 127650 144790 116370 124700 157190 144500 162710 93271 84675 102010 109860 100370 122320 111400 106730 121520 136520 132500 129660 146290 122630 128430 157500 138190 154410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66825000 17185 4680 16284 32639 26143 26143 1 9606 Homo sapiens 0.047264902555753 LQLDSPEDAEFIVAK Unmodified 1673.8512 0.85121708 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O43242-2 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 4.5 0.5 1 1 62.312 62.338 3 1.5654E-10 19316 20230619_1883_Aki_TMTPro18x_K_F4 150.57 133.35 150460 119530 126850 139140 144040 161180 148920 134410 162780 186420 156980 149410 185200 149520 154820 205880 161940 180960 138920 109620 131160 139190 148460 160740 150270 140570 165050 184510 162510 153410 186620 157250 158650 204430 155000 172070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 501690000 17186 2361 16285 32640;32641 26144;26145 26144 2 9606 Homo sapiens 0.04124552304165263 LQLEAIHK Unmodified 950.55492 0.5549159 4276 Q8WUA4;Q53SY8;H0Y4Q6;H7C1A9;H7C318 GTF3C2 General transcription factor 3C polypeptide 2 yes no 0 0 0 8 0 1 47.549 47.608 3 0.0007397 12505 20230619_1888_Aki_TMTPro18x_K_F8 123.86 74.502 159240 124490 139950 153610 155120 177370 167610 159730 185060 177480 187340 178320 198200 157770 168330 213320 205800 190520 147050 114230 144100 153040 160360 177140 168800 164890 187650 178470 192500 180400 200490 166380 174010 212060 196440 181250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235000000 17187 4276 16286 32642 26146 26146 1 9606 Homo sapiens 0.07766064168470166 LQLEETDHQK Unmodified 1239.6095 0.60953025 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 0 3 0 1 40.675 40.734 3 0.00035194 9918 20230619_1882_Aki_TMTPro18x_K_F3 103.46 83.784 55344 39074 47495 52932 70820 65886 71086 79652 101720 75293 82838 79905 84824 66335 74773 95749 85535 78054 51071 35906 49280 52492 71696 65968 72573 80245 101050 76499 85928 80517 86012 70421 76920 94695 81683 74351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65158000 17188 3921 16287 32643 26147 26147 1 9606 Homo sapiens -0.0006901354145156802 LQLEIDQK Unmodified 985.54441 0.5444108 4703 Q9Y266;Q9H2R7;A0A0A0MSU9;A0A0A0MSS4 NUDC;NPD011 Nuclear migration protein nudC yes no 0 0 0 5 0.816 1 1 1 53.311 53.367 2 0.0020351 15170 20230619_1885_Aki_TMTPro18x_K_F5 144.12 43.973 121480 76683 94996 125810 101170 135340 125180 103610 152720 149170 152030 168680 177620 146040 136760 180980 172480 174380 111960 70666 99023 122990 105530 135290 125600 109370 154010 148970 157200 169550 178530 153240 142000 180810 164700 165690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276860000 17189 4703 16288 32644;32645;32646 26148 26148 1 9606 Homo sapiens 0.051060367233731085 LQLELSK Unmodified 829.49092 0.49091866 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;Q8N519;A0A6Q8PF80;A0A6Q8PGH0;A0A6Q8PF59;A0A6Q8PFM1 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 5.33 3.09 1 1 1 54.202 54.247 2 0.0075798 15339 20230619_1888_Aki_TMTPro18x_K_F8 131.03 29.043 1060000 815750 844810 1123700 1400800 2108400 579760 2426900 577550 1070700 1098600 973580 1099900 882070 1287200 1155400 730810 909950 978120 749480 886160 1122100 1394400 2061600 637920 2413700 612520 1148600 1102400 991680 1130000 927290 1274300 1143600 705850 866220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3941899999.9999995 17190 1428 16289 32647;32648;32649 26149;26150 26150 2 9606 Homo sapiens 0.06935284011512977 LQLEYCSLSAASCEPLASVLR Unmodified 2366.161 0.16101703 1206 A0A140VJT8;P13489;A0A024RC87;E9PIM9;E9PMJ3;E9PLZ3 RNH1 Ribonuclease inhibitor yes no 0 0 0 1 0 1 63.704 63.704 3 0.012326 19975 20230619_1880_Aki_TMTPro18x_K_F1 50.776 44.294 6363.4 5809.7 4364.2 7657 6560.3 8107 6815.1 6625.3 7944.6 8177.2 7445.6 8153.9 7548.3 7419.8 6704.6 7228.5 7768.7 10217 5873 5331.8 4654.3 7578.5 6660.6 8126.8 6887.6 6914.8 8014.6 8182 7671.6 8246.4 7668.2 7669.2 6895 7432.5 7439.7 9663.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8030900 17191 1206 16290 32650 26151 26151 1 9606 Homo sapiens 0.03258296466538013 LQLHEHYK Unmodified 1066.556 0.55597854 2137 B2RA06;A8K9G4;Q92636;Q92636-2 NSMAF Protein FAN yes no 0 0 0 7 0 1 37.013 37.078 4 0.00095425 8102 20230619_1887_Aki_TMTPro18x_K_F7 118.5 84.242 47858 34723 44054 43319 44563 50489 49520 45671 56103 51477 51766 54290 55098 43439 53158 59641 66034 54930 44192 31876 45074 43140 46405 50398 49842 47156 56608 51808 53487 54623 56032 46029 54830 59391 62980 52263 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19177000 17192 2137 16291 32651 26152 26152 1 9606 Homo sapiens 0.025362785373545194 LQLLDVK Unmodified 827.51165 0.5116541 2546 B4DMP4;Q08AM6;H3BQD9;Q9NW56;Q08AM6-2;Q9NTB8 VAC14;DKFZp434J032 Protein VAC14 homolog yes no 0 0 0 1 0 1 58.805 58.805 2 0.01935 18051 20230619_1880_Aki_TMTPro18x_K_F1 106.04 45.534 43703 28458 37690 40943 37555 37479 42107 38164 55535 45739 44671 45800 57540 51687 42537 63362 70372 72374 40313 26178 38798 40267 39147 38181 42592 39167 55372 45863 46898 46725 57665 53750 45168 63916 67076 68638 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14144000 17193 2546 16292 32652 26153 26153 1 9606 Homo sapiens 0.09099874391188223 LQLLEDDK Unmodified 972.51278 0.51277632 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 2 0 1 56.284 56.302 3 0.011562 17095 20230619_1881_Aki_TMTPro18x_K_F2 72.325 26.303 27672 22960 20431 29270 22799 29306 29487 23338 33286 30045 32485 32945 39258 31606 28597 41527 42041 36212 25534 21071 21456 29020 23727 29486 29436 24465 33655 30115 33656 33288 39349 33168 30077 41236 40054 34472 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6714100 17194 261 16293 32653 26154 26154 1 9606 Homo sapiens 0.025420439694130437 LQLLEDDKENR Unmodified 1371.6994 0.69940789 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 1 3 0 1 49.903 49.978 3 3.6938E-07 14113 20230619_1882_Aki_TMTPro18x_K_F3 138.24 108.43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17195 261 16294 32654 26155 26155 1 9606 Homo sapiens 0.028426160671187972 LQLLTGEHRPEDEEELEK Unmodified 2164.0648 0.064791686 3854 Q13505-3;Q13505;Q13505-2 MTX1 Metaxin-1 yes no 0 0 1 3 1.41 1 1 1 1 1 50.266 50.313 4 1.8883E-06 14593 20230619_1881_Aki_TMTPro18x_K_F2 113.23 95.992 135590 113720 126330 146670 139650 153310 149170 146800 166680 162750 170720 154530 184070 146850 162510 176940 181830 175380 125320 104370 129430 145470 144280 154370 150400 150870 169000 163400 175440 157080 186350 153390 166780 177210 173750 166620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 838940000 17196 3854 16295 32655;32656;32657;32658;32659 26156 26156 1 9606 Homo sapiens 0.029321882224849105 LQLPNMK Oxidation (M) 858.46332 0.4633237 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;G3V281;G3V5R2 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 1 0 2 0 1 47.911 47.982 3 0.017286 13508 20230619_1881_Aki_TMTPro18x_K_F2 76.847 52.511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17197 385 16296 32660 26157 26157 240 1 9606 Homo sapiens 0.028430574796402652 LQLVGTAAMLLASK Unmodified 1414.8218 0.82177163 1175 A0A140VJG0;B2RAM9;P78396-3;P20248;P78396-2;P78396 CCNA1;CCNA2 Cyclin-A1;Cyclin-A2 yes no 0 0 0 7 0 1 65.362 65.389 3 0.00017391 20277 20230619_1887_Aki_TMTPro18x_K_F7 80.534 61.436 18177 11652 15848 14463 14718 16245 14820 14288 22611 15894 19284 15712 17247 15312 17353 17679 16512 17809 16767 10702 16265 14403 15402 16249 15179 14778 22432 15992 19827 15962 17675 15931 17600 17736 15816 16909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17201000 17198 1175 16297 32661 26158 26158 1 9606 Homo sapiens 0.13095361544992556 LQLWDTAGQER Unmodified 1315.6521 0.65206377 342;3903 P20340;A0A024R5J5;P20340-2;A0A024R5H8;Q6FGX3;Q53ET8;P20340-4;B7Z5Z9;Q9NRW1;Q6AZ91;J3KR73;Q9NRW1-2;C9JU14;C9JB90;Q14964 RAB6A;RAB6B;RAB39A Ras-related protein Rab-6A;Ras-related protein Rab-6B;Ras-related protein Rab-39A no no 0 0 0 4.71 1.03 1 2 2 2 53.91 53.971 2;3 8.8598E-12 15624 20230619_1883_Aki_TMTPro18x_K_F4 196.88 0 1292400 1142600 1391100 1365500 1160600 1409000 1400700 1376000 1400100 1771400 1777000 1732000 1843500 1543100 1678900 1872000 1832000 2061500 1196400 1047700 1401400 1361700 1230600 1420700 1399300 1418700 1443000 1767000 1808100 1753700 1871300 1616000 1719800 1885800 1753000 1955100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 5410200000 17199 342;3903 16298 32662;32663;32664;32665;32666;32667;32668 26159;26160;26161;26162;26163 26159 5 9606 Homo sapiens 0.006863815867973244 LQMEAPHIIVGTPGR Oxidation (M) 1633.861 0.86101068 2105 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;J3KTB5;J3KSZ0;J3QL43;J3QR64;J3QLN6;J3KS25;J3QKZ9;B4E047 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 1 0 4.25 3.27 2 1 1 45.857 45.899 3 7.9655E-06 12706 20230619_1880_Aki_TMTPro18x_K_F1 113.01 91.256 317110 271090 297960 330750 332530 366220 381430 344720 533210 248710 274010 257450 293610 220360 306140 291660 257770 277420 293160 248650 305030 329570 344260 367130 386070 351250 523280 257390 294130 259960 299500 232420 308340 291200 247230 263580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1748699999.9999998 17200 2105 16299 32669;32670;32671;32672 26164;26165;26166 26164 1326 3 9606 Homo sapiens 0.06943461828518593 LQMEAPHIIVGTPGR Unmodified 1617.8661 0.86609606 2105 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;J3KTB5;J3KSZ0;J3QL43;J3QR64;J3QLN6;J3KS25;J3QKZ9;B4E047 EIF4A1 Eukaryotic initiation factor 4A-I yes no 0 0 0 4.5 3.5 1 1 51.209 51.248 3 8.546899999999999E-26 14849 20230619_1880_Aki_TMTPro18x_K_F1 238.12 212.48 188410 146090 182340 200210 167820 217020 209360 205270 238950 227230 209830 176350 241730 194990 185350 256000 231650 226590 174110 134210 185670 197900 176860 217780 209590 211090 240640 227010 217770 182180 243000 203820 192410 254410 221160 215550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1443900000 17201 2105 16299 32673;32674 26167;26168 26167 2 9606 Homo sapiens 0.08187765691150162 LQMEQQQQLQQR Oxidation (M) 1572.7678 0.76783858 4011 Q9NS69;Q549C5;Q53GB0 TOMM22;MST065 Mitochondrial import receptor subunit TOM22 homolog yes no 0 1 0 5 0.816 1 1 1 36.866 36.934 3 1.438E-10 8177 20230619_1885_Aki_TMTPro18x_K_F5 190.53 151.02 44966 32455 46103 50337 57449 60735 59862 55931 65275 52856 60616 60954 69211 52144 59498 53892 70519 61263 41557 29868 46939 49472 58810 60497 60366 57400 65974 53855 62789 61210 69866 54209 61241 54566 67301 58144 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 227320000 17202 4011 16300 32675;32676;32677 26169;26170;26171 26170 2649 3 9606 Homo sapiens 0.004365373753444146 LQNALNEQR Unmodified 1084.5625 0.56252048 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 5.5 0.5 1 1 41.058 41.149 2 0.00034924 9973 20230619_1885_Aki_TMTPro18x_K_F5 138.98 99.827 259390 179560 251690 268600 327320 362150 308090 287670 418870 285740 336020 334820 346250 306050 312590 281150 376030 323240 239560 165210 257560 264980 333700 357280 315010 299020 416710 290780 349050 336650 351630 315310 321740 285460 358800 306770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 404660000 17203 349;3906 16301 32678;32679 26172 26172 1 9606 Homo sapiens 0.023621716980642304 LQNEILK Unmodified 856.50182 0.5018177 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 7 0 1 50.401 50.482 2 0.0036213 13765 20230619_1887_Aki_TMTPro18x_K_F7 161.11 35.859 531730 404720 446410 461580 711800 703030 630110 620510 829400 573050 712160 719890 690460 626470 771080 745100 811370 780930 490810 371150 464610 464700 716050 690920 645850 638160 828100 586770 735490 721370 709610 655320 784730 748980 775710 741470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 312330000 17204 673 16302 32680 26173 26173 1 9606 Homo sapiens 0.06782686385804482 LQNFAQLPAHR Unmodified 1293.6942 0.69420335 1070 D3DXD9;D3DXD8;A0A0S2Z3H1;P42575-2;P42575;B4E085;D3DXE0;B4E0I5 hCG_20684;CASP2 Caspase;Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 yes no 0 0 0 4 0 1 46.298 46.341 3 3.6689E-07 12308 20230619_1883_Aki_TMTPro18x_K_F4 167.1 128.81 26149 22950 27422 29443 29194 33176 32426 34677 42898 30164 32371 29351 33703 28505 32675 34077 36027 30400 24200 21059 27793 29251 30290 33292 32827 35191 42647 30728 33747 29831 34314 29723 33434 33949 34399 28934 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59411000 17205 1070 16303 32681 26174 26174 1 9606 Homo sapiens 0.05910401785831709 LQNFSYDQR Unmodified 1169.5465 0.54653606 4096 Q69YJ7;Q9NTZ6;B4DRP9;B3KQH4 DKFZp667H197;RBM12 RNA-binding protein 12 yes no 0 0 0 6.5 0.5 1 1 46.336 46.422 2 2.4343E-05 11937 20230619_1887_Aki_TMTPro18x_K_F7 192.6 172.82 248750 190290 220390 243560 283530 305140 280280 254770 327010 244980 237990 209220 238800 191350 260120 235230 233720 183080 229700 174700 227340 242320 289480 302730 284070 263530 326780 247250 248290 213530 244640 200300 262520 232890 223520 174630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102780000 17206 4096 16304 32682;32683 26175;26176 26176 2 9606 Homo sapiens -0.03145534538816719 LQNLSLEGLR Unmodified 1141.6455 0.64552182 80 A0A7I2YQB7;D6RF40;D6R9R7;A0A7I2V5B8;A0A7I2YQC7;A0A7I2V2J7;B4DHK6;A0A024R069;A0A0A0MTL5;Q13309-2;Q13309 SKP2 S-phase kinase-associated protein 2 yes no 0 0 0 1 0 1 56.449 56.449 2 0.0016831 17015 20230619_1880_Aki_TMTPro18x_K_F1 119.22 66.508 77773 62062 66521 67718 45939 57625 54412 54538 59275 81025 71552 61590 81370 58956 65399 90704 70847 65194 71818 56879 68198 67824 49665 58988 54586 56653 60718 79842 73184 63369 81901 62607 67224 89136 67694 62213 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65027000 17207 80 16305 32684 26177 26177 1 9606 Homo sapiens 0.08036488426091637 LQNNCTSSITR Unmodified 1292.6143 0.61429805 298 A0A087WZA9;A0A024R4K9;A0A087X266;Q9BXJ8-2;Q9BXJ8 TMEM120A;TMPIT Transmembrane protein 120A yes no 0 0 0 8 0 1 36.889 36.875 2 0.00085027 8242 20230619_1888_Aki_TMTPro18x_K_F8 107.79 80.534 7626.3 4022.4 10830 9050.3 9517.4 6582.2 6194.8 7553.8 7852.8 6330.5 8568.9 7503.3 9373.4 8713.8 9372.6 4599.6 10681 7563.7 7060.7 3728.6 10695 8691.5 9864.6 6868.7 6507 7620 7932.7 6502.7 8787.4 7604.3 9546 8732.3 9573.8 4872.6 10185 7164.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10933000 17208 298 16306 32685 26178 26178 1 9606 Homo sapiens -0.020304526703284864 LQNSYQPTNK Unmodified 1191.5884 0.58840088 1002 A8K6X3;A0A0C4DG89;Q7L014;H0Y9U3 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 1 0 1 41.981 41.981 2 0.00015006 10989 20230619_1880_Aki_TMTPro18x_K_F1 140.45 96.311 13214 8007.9 15408 14082 24589 25116 18262 20834 24254 13985 24496 27985 28135 19756 20925 14503 29000 25930 12215 7388 15597 13856 24633 24451 18970 21385 24340 14943 25294 27480 28233 20398 21810 15322 27648 24519 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14693000 17209 1002 16307 32686 26179 26179 1 9606 Homo sapiens 0.0002702114970816183 LQPDQLR Unmodified 868.47667 0.47666558 4474 S4R369;Q9BZE1;H0Y4J2;Q6TGK8;A6NHR2 MRPL37 39S ribosomal protein L37, mitochondrial yes no 0 0 0 5 0 1 40.653 40.741 2 0.0054217 9834 20230619_1885_Aki_TMTPro18x_K_F5 140.98 21.094 172280 143900 146800 189850 210730 220570 222460 214740 286240 168580 169980 166610 181460 158420 166250 182580 209810 140410 159130 132100 152490 188260 214190 220560 225380 218570 283010 173050 180350 169040 184260 164870 171780 180730 199840 134070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 226270000 17210 4474 16308 32687 26180 26180 1 9606 Homo sapiens 0.037166315832337204 LQPFATEADVEEALR Unmodified 1687.8417 0.84171503 2188 B1AHB0;P33992;Q53FG5;A8K521;B1AHB1;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 3.5 0.5 1 1 62.078 62.095 3 2.114E-52 19289 20230619_1882_Aki_TMTPro18x_K_F3 241.3 215.97 38216 30269 34386 34860 30044 44182 36451 35590 45349 46822 45106 42511 46971 40623 47152 50691 40125 42561 35301 27756 35199 34953 31834 43751 36663 37247 45701 46600 46360 43299 47881 42487 47578 50319 38476 40502 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96909000 17211 2188 16309 32688;32689 26181 26181 1 9606 Homo sapiens 0.025307840186542307 LQPGVGTSGR Unmodified 970.51959 0.51959303 2444 B3KY58;Q8IVB5 LIX1L LIX1-like protein yes no 0 0 0 7.5 0.5 1 1 36.207 36.234 2 0.0019177 7979 20230619_1888_Aki_TMTPro18x_K_F8 99.815 29.99 38135 24757 41617 42763 50091 57416 42388 45487 55834 49315 64435 68792 63739 54624 49029 41195 74095 64385 35243 22827 42118 41860 51185 56638 43626 47392 56433 50245 65677 68414 64393 56124 51444 42947 70584 60943 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28364000 17212 2444 16310 32690;32691 26182 26182 1 9606 Homo sapiens 0.03315401640679738 LQPHPGLEK Unmodified 1017.5607 0.56072956 2970 F5H1S8;Q14165 MLEC Malectin yes no 0 0 0 6.5 0.5 1 1 39.786 39.862 3 0.00040674 9169 20230619_1887_Aki_TMTPro18x_K_F7 115.78 64.436 184280 146040 190220 192520 215860 233470 225320 208670 274520 218710 244710 229740 233400 198220 246170 227180 247210 218780 170410 134100 193150 191120 222440 232400 228090 215190 275500 220980 251930 231720 239180 207020 250030 227450 236320 207990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 332590000 17213 2970 16311 32692;32693 26183;26184 26184 2 9606 Homo sapiens 0.05265162680132107 LQPHPQLSPEIR Unmodified 1413.7728 0.7728476 3871 Q13895 BYSL Bystin yes yes 0 0 0 7.5 0.5 1 1 41.95 41.984 3 4.3138000000000005E-24 10065 20230619_1887_Aki_TMTPro18x_K_F7 205.02 183.27 77283 62051 77259 85942 88520 86462 79610 83376 105130 88709 95972 89551 95984 77057 94876 88998 97733 94461 71453 57004 78682 84810 90771 87337 81595 85539 105260 89427 98859 90467 97879 80564 96618 89574 93460 89674 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133320000 17214 3871 16312 32694;32695 26185;26186 26185 2 9606 Homo sapiens 0.08251209300260598 LQPIALSCVLNIGACK Unmodified 1755.9375 0.93754644 2866 Q6FGM6;E5KN59;E5KN55;Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes no 0 0 0 5.67 0.471 1 2 63.749 63.796 3 1.575E-14 19896 20230619_1886_Aki_TMTPro18x_K_F6 177.88 155.41 113240 95545 109060 112870 103850 117420 111720 104500 126510 139500 116580 124000 139970 118740 119380 146760 137720 145800 104700 87613 111080 112640 108540 118120 112660 108610 127800 138640 121160 126370 141150 124160 122920 146900 131650 138460 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 488980000 17215 2866 16313 32696;32697;32698 26187;26188;26189 26189 3 9606 Homo sapiens 0.08981517333563716 LQPLDFK Unmodified 859.48035 0.48035398 2788;555 A0A3Q8Q4D0;A0A3S8NFS6;A0A0K0Q2Z1;A0A024R944;A0A2S0BDD1;P01008;CON__P41361 SERPINC1 Antithrombin-III no no 0 0 0 7.5 0.5 1 1 56.905 56.962 2 0.021983 16578 20230619_1888_Aki_TMTPro18x_K_F8 107.9 47.537 + 226160 185370 188800 251870 296120 332120 228520 232520 419570 481300 976040 1469900 498400 608750 985120 531460 764830 1180400 208840 170250 196870 249690 297840 327460 240550 251630 437680 502380 958220 1415500 547670 651400 978700 573030 736790 1112700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 724410000 17216 555;2788 16314 32699;32700 26190;26191 26191 2 9606 Homo sapiens 0.04499301357088825 LQPLSPVPSDIEISR Unmodified 1649.8988 0.89883598 824 A0A087WVM4;B7ZM99;Q6UB35;B2RD24;H0Y327 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes no 0 0 0 6.5 0.5 1 1 58.894 58.951 2 4.7119E-10 17703 20230619_1886_Aki_TMTPro18x_K_F6 191.48 116.37 56664 49136 51685 54271 43942 51137 52943 50469 58084 67623 66490 62503 67972 58921 64751 71095 71857 81189 52377 45024 52816 54367 46532 51951 53040 52080 59263 67255 67867 63573 69182 61565 66330 71790 68749 76972 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64533000 17217 824 16315 32701;32702 26192;26193 26192 2 9606 Homo sapiens 0.0998825129506713 LQPSSSPENSLDPFPPR Unmodified 1866.9112 0.91119158 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;A0A024QZ91;A0A024QZC0 ATXN2L Ataxin-2-like protein yes no 0 0 0 5.5 0.5 1 1 55.704 55.774 3 1.04E-13 16307 20230619_1886_Aki_TMTPro18x_K_F6 160.43 148.96 133290 117200 125550 129520 121590 137880 128070 129440 147840 141440 136730 135010 146940 125870 156070 150620 146800 156190 123250 107380 128140 129940 126850 138630 129400 133150 149090 142130 141290 137060 150080 131470 158000 151300 140610 148260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56259000 17218 4285 16316 32703;32704 26194;26195 26195 2 9606 Homo sapiens 0.01241242967398648 LQPSSTSESMDQLLNK Unmodified 1776.8564 0.85637882 2986 F8W0B5;A0A2R8Y7P6;V9GY86;Q2M2R5;F8WB06;F8VQP2;A0A2R8Y5A6;A0A2R8YDM9;Q99700;A0A2R8Y7E6;H0YH87;A0A5F9ZHX3;A0A5F9ZHW5;Q99700-5;Q99700-2;Q99700-4;A0A5F9ZI57;A0A5F9ZHH4 ATXN2 Ataxin-2 yes no 0 0 0 6.5 0.5 1 1 58.184 58.245 3 1.0898E-15 17084 20230619_1887_Aki_TMTPro18x_K_F7 193.17 156.15 121550 105140 118100 129220 123660 149430 166940 176950 238890 170500 170290 163350 182870 152210 177680 189290 180310 196710 112410 96439 120460 128820 129390 150150 167940 178600 236320 172560 178450 165860 186000 159390 180980 190000 172600 186700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138550000 17219 2986 16317 32705;32706 26196;26197 26197 2 9606 Homo sapiens -0.0009751189550115669 LQPTWNDLGDK Unmodified 1285.6303 0.63026569 4089 Q86UY0;Q6EHZ3;Q658S9;Q8NBS9 TXNDC5;STRF8;DKFZp666I134 Thioredoxin domain-containing protein 5 yes no 0 0 0 5.5 0.5 1 1 56.024 56.098 2 0.00073172 16517 20230619_1886_Aki_TMTPro18x_K_F6 110.66 78.441 45835 43254 50813 50955 40571 54085 53496 53476 61639 72785 69142 76350 79333 64548 62589 87345 84358 88745 42461 39647 51065 50883 43363 54427 53464 55188 62694 72610 71065 76935 79849 68194 65278 87404 80534 84259 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33106000 17220 4089 16318 32707;32708 26198;26199 26199 2 9606 Homo sapiens -0.0011242316179504996 LQQEATEHATESEER Unmodified 1756.7864 0.78638499 4756 Q9Y6C2;A0A0A0MT20;Q9Y6C2-2 EMILIN1 EMILIN-1 yes no 0 0 0 1 0 1 34.681 34.681 3 4.6465E-52 7854 20230619_1880_Aki_TMTPro18x_K_F1 284.86 257.18 12161 10176 13329 14881 17045 18544 13363 16309 18329 20600 29095 47498 24734 21355 28381 22858 31331 36409 11256 9352.8 13505 14681 17316 18418 13859 16936 18818 21377 29284 46024 25555 22961 28929 23723 29984 34420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49019000 17221 4756 16319 32709 26200 26200 1 9606 Homo sapiens -0.061736742397897615 LQQEETQLEQSIQAGR Unmodified 1856.9228 0.9228189 449 A5PKY0;A0A024R7G6;M0R165;A8K5P4;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2;B4DQX5;B4DME4 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 3 0 1 56.719 56.756 3 1.128E-19 17079 20230619_1882_Aki_TMTPro18x_K_F3 211.7 164.19 39502 34527 34355 34930 28691 44136 35040 39097 62673 39089 34261 31912 41857 32683 42028 45044 37327 44599 36502 31613 35258 35382 30590 43798 35806 40267 61085 39353 36806 32776 42476 34366 42494 45029 35810 42339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163740000 17222 449 16320 32710 26201 26201 1 9606 Homo sapiens 0.028634399907559782 LQQEIENLK Unmodified 1113.603 0.60298831 2996 Q567U6;F8W9X7;H7C050 CCDC93 Coiled-coil domain-containing protein 93 yes no 0 0 0 5 0 1 56.781 56.843 3 7.1255E-05 16601 20230619_1885_Aki_TMTPro18x_K_F5 142.43 70.102 31489 29605 35124 29683 27792 39499 39418 32306 44241 34341 43731 38647 36131 31409 37867 42162 36419 38790 29172 27098 35251 30124 29819 39024 39209 33573 44710 34756 44529 38830 37200 33193 38423 41996 34876 36870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50845000 17223 2996 16321 32711 26202 26202 1 9606 Homo sapiens 0.050730932978467536 LQQENSILR Unmodified 1099.5986 0.59857163 1989 Q9P2E9;A7BI36;Q9P2E9-3;A1A5C5;A1A5C4;F8W7S5;A0A6F7YPF6;C9J066;E9PN67;Q5XUU0;H9KV85;Q8N4C6-2;Q8N4C6-10;Q8N4C6-5;Q8N4C6;Q8N4C6-4;Q8N4C6-9;Q8N4C6-6;Q8N4C6-11;Q8N4C6-7 RRBP1;NIN Ribosome-binding protein 1;Ninein yes no 0 0 0 5.5 0.5 1 1 44.232 44.318 2 0.0015814 11352 20230619_1886_Aki_TMTPro18x_K_F6 112.01 77.755 166720 135810 149420 124070 152110 178830 175930 185810 212260 157900 164440 149510 154800 127030 163860 164630 175110 161350 154030 124280 153140 127180 158600 176880 177130 188460 212090 160890 170480 151500 158730 133790 167080 164650 167340 153330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104950000 17224 1989 16322 32712;32713 26203 26203 1 9606 Homo sapiens 0.052756288749378655 LQQEQDLRR Unmodified 1184.6262 0.62618337 1847 A0A8V8TPV5;A0A8V8TQZ3;Q8WWQ0;A0A8V8TQM4;A0A8V8TPK0 PHIP PH-interacting protein yes no 0 0 1 4.5 0.5 1 1 33.212 33.281 3 0.0018388 6848 20230619_1883_Aki_TMTPro18x_K_F4 93.096 44.456 62677 51888 55168 62081 66550 72725 66773 64316 86304 68469 72709 71447 64288 64740 54160 82699 99315 79378 57902 47590 56879 61991 68276 72548 67894 66405 86217 69117 74840 72205 65536 67899 57894 82543 94449 75502 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43543000 17225 1847 16323 32714;32715 26204 26204 1 9606 Homo sapiens 0.0412553213514002 LQQESTFLFHGNK Unmodified 1547.7732 0.77324153 312 A0A024R4X7;Q9UKX7-2;Q9UKX7 hCG_1989366;NUP50 Nuclear pore complex protein Nup50 yes no 0 0 0 1 0 1 51.978 51.978 3 3.6799E-11 15187 20230619_1880_Aki_TMTPro18x_K_F1 184.21 156.8 174600 138220 159490 162170 123410 165450 143670 153260 177330 178720 182370 200410 222230 176620 153630 238430 241880 270420 161300 126770 162750 161890 131910 166740 144850 158110 179020 179920 188650 201700 222300 186350 162770 240100 230770 256400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108830000 17226 312 16324 32716 26205;26206 26206 2 9606 Homo sapiens 0.021265842294496906 LQQGYNAMGFSQGGQFLR Oxidation (M) 2016.9476 0.94759386 1335 A0A2C9F2P4;A0A286YFF7;P50897;B4DWU3;Q5T0S4;A0A286YFE3;A0A286YFL8;E9PK48 PPT1 Palmitoyl-protein thioesterase 1 yes no 0 1 0 4 0 1 54.517 54.532 3 1.3949E-07 16017 20230619_1883_Aki_TMTPro18x_K_F4 124.15 109.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17227 1335 16325 32717 26207 26207 848 1 9606 Homo sapiens -0.0202020340755098 LQQGYNAMGFSQGGQFLR Unmodified 2000.9527 0.95267924 1335 A0A2C9F2P4;A0A286YFF7;P50897;B4DWU3;Q5T0S4;A0A286YFE3;A0A286YFL8;E9PK48 PPT1 Palmitoyl-protein thioesterase 1 yes no 0 0 0 5 0 1 59.375 59.429 2 2.4469E-16 17661 20230619_1885_Aki_TMTPro18x_K_F5 178.15 155.68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17228 1335 16325 32718 26208 26208 1 9606 Homo sapiens -0.007758995449194117 LQQIAAALENK Unmodified 1197.6717 0.67173657 3230 O15031;Q3LIB1;Q2TBE4 PLXNB2;Nbla00445 Plexin-B2 yes no 0 0 0 1.5 0.5 1 1 62.639 62.644 3 0.0011485 19559 20230619_1880_Aki_TMTPro18x_K_F1 89.403 66.717 13119 11240 12993 12685 8771.4 13008 15565 13048 18026 17972 18321 19890 20393 17860 15981 25833 24352 23205 12134 10302 13152 12702 9654.4 13126 15371 13467 18234 17961 18881 20044 20552 18903 16844 25653 23211 22073 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11708000 17229 3230 16326 32719;32720 26209 26209 1 9606 Homo sapiens 0.08080757597531374 LQQLGEAHQAETEVLRR Unmodified 1977.0392 0.039186058 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;A8K394;F5H4J1;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 5.5 0.5 1 1 44.846 44.93 4 8.8178E-30 11628 20230619_1885_Aki_TMTPro18x_K_F5 220.64 190.9 124310 111850 115300 98078 131590 145100 124330 109680 170100 111550 114840 100470 109680 93836 120470 118820 123510 108490 114950 102280 118000 100910 135310 142440 127130 114550 168330 112480 120120 102360 112660 98331 122470 118440 118040 103210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1344600000 17230 349;3906 16327 32721;32722 26210;26211 26210 2 9606 Homo sapiens 0.08974803281307686 LQQLPADFGR Unmodified 1143.6037 0.60365701 4323 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 7.5 0.5 1 1 52.743 52.816 2 1.2554E-05 14719 20230619_1888_Aki_TMTPro18x_K_F8 189.38 135.22 959280 775030 806900 884960 916410 1045600 1057700 1011400 1156500 1066100 966360 994360 1216200 946250 1054600 1262100 1155200 1137600 885780 710580 834630 886960 947630 1044400 1061000 1037000 1165400 1072600 1011700 1011400 1225200 994710 1081900 1255600 1104200 1081900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2516200000 17231 4323 16328 32723;32724 26212;26213;26214 26213 3 9606 Homo sapiens 0.03759932737557392 LQQNISWK Unmodified 1015.5451 0.5450795 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;B4E263;A2VDI1;B3KWS1;Q8N7L7;B7ZAU8 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 3 0 1 52.05 52.116 3 0.027591 15084 20230619_1882_Aki_TMTPro18x_K_F3 68.016 39.842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17232 2332 16329 32725 26215 26215 1 9606 Homo sapiens 0.037928761630723784 LQQQEQREEAQWTPTK Unmodified 1998.9759 0.9759171 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B4DL23 CEP170 Centrosomal protein of 170 kDa yes no 0 0 1 5 0 1 45.729 45.806 3 0.0006274 11970 20230619_1885_Aki_TMTPro18x_K_F5 79.837 63.152 38084 40286 38028 37839 42033 32437 33485 39362 31806 44302 40777 41168 44221 35852 39213 47432 56851 41292 35279 36841 38666 38390 42995 33442 34255 39853 32939 44371 41571 41758 44792 37772 40973 47113 54116 39341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12794000 17233 1960 16330 32726 26216 26216 1 9606 Homo sapiens 0.016388177734143028 LQQQQAQQPLQQQQQR Unmodified 1977.014 0.01403394 4602 Q9NVH2-4;Q9NVH2-3;Q9NVH2-2;Q9NVH2;A0A087WXK3 INTS7 Integrator complex subunit 7 yes no 0 0 0 8 0 1 37.359 37.344 3 2.0778999999999998E-19 8393 20230619_1888_Aki_TMTPro18x_K_F8 205.87 191.27 7139.8 6001.7 9534.2 9209.8 11011 12388 9433.1 10118 11614 10270 9946.9 11511 12232 10750 9080.5 12150 10760 12050 6621.4 5519.3 9505.8 9074 11276 12228 9674 10494 11646 10414 10391 11601 12266 11185 9399.2 12173 10288 11441 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61049000 17234 4602 16331 32727 26217 26217 1 9606 Homo sapiens 0.06460748478730238 LQQQQQQQQLAQMK Oxidation (M) 1742.8734 0.87336628 288 Q6Y7W6;Q6Y7W6-5;Q6Y7W6-4;A0A024R4A5;Q6Y7W6-3;I1E4Y6;A0A7I2V361;A0A7I2V3H0;A0A7I2V516;A0A7I2V3H7;B4DZM1 GIGYF2;TNRC15 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 0 1 0 8 0 1 40.974 40.966 3 2.8005E-07 9890 20230619_1888_Aki_TMTPro18x_K_F8 138.42 124.46 12183 11057 9780.6 12596 14590 17125 11852 13323 18809 10878 11205 12947 11134 11450 12833 13394 13465 11916 11254 10133 10225 12648 14730 16884 12319 13804 18444 11209 11865 13000 11466 11949 13057 13347 12867 11339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23177000 17235 288 16332 32728 26218 26218 174 1 9606 Homo sapiens 0.03164453500949094 LQQQQRPEDAEDGAEGGGK Unmodified 2011.9195 0.91952443 3813 Q08J23-2;Q08J23;A0A140T9Y7 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 0 0 1 1 0 1 36.761 36.761 3 3.4719E-10 8681 20230619_1880_Aki_TMTPro18x_K_F1 105.38 99.834 47367 34322 51956 54260 54736 63240 57909 59246 73253 67076 70964 70637 83779 63789 61604 68044 79253 80975 43803 31594 52459 53249 56751 63140 58686 61003 73666 67498 73447 71306 84005 66310 64039 69016 75670 76767 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39691000 17236 3813 16333 32729 26219;26220 26219 2 9606 Homo sapiens -0.04595854853914716 LQQTAFENAYLK Unmodified 1424.73 0.72997974 236 A0A024R3C7;Q13315;E9PIN0;A0A6Q8PH76 ATM Serine-protein kinase ATM yes no 0 0 0 8 0 1 57.136 57.188 3 0.045792 16673 20230619_1888_Aki_TMTPro18x_K_F8 46.132 26.036 51228 45870 58743 59023 60318 74369 64905 68458 83361 52611 57807 64454 68354 55207 67862 64164 60772 72313 47454 42089 59087 58724 62719 73867 65744 69911 82767 54441 61034 64591 69386 57745 68606 64804 58294 68555 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18565000 17237 236 16334 32730 26221 26221 1 9606 Homo sapiens 0.03460394452190485 LQQTEAELR Unmodified 1086.5669 0.56693715 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32 VARS Valine--tRNA ligase yes no 0 0 0 3 0.816 1 1 1 42.912 42.976 2 0.00011993 10771 20230619_1882_Aki_TMTPro18x_K_F3 152.38 102.53 381000 319500 353850 366470 449520 412740 412100 400310 416840 428690 477550 362960 417790 318140 494790 319250 353480 312380 352150 292900 363110 366950 457680 413890 417900 410540 426900 429670 483920 370110 431430 329950 492990 321070 339280 296920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 512570000 17238 725 16335 32731;32732;32733 26222;26223 26223 2 9606 Homo sapiens 0.027116361209891693 LQQTEAELRK Unmodified 1214.6619 0.66190017 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32 VARS Valine--tRNA ligase yes no 0 0 1 6 0.816 1 1 1 43.08 43.164 3 5.0518E-07 10849 20230619_1886_Aki_TMTPro18x_K_F6 171.74 131.68 331710 187500 221510 280410 249090 337930 262480 310350 516140 455060 496550 609300 568620 530100 306370 737750 745340 743870 305290 172680 235010 276100 258260 336450 271710 322700 510500 457100 513760 608930 566470 560060 342760 736950 708890 706470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274080000 17239 725 16336 32734;32735;32736 26224 26224 1 9606 Homo sapiens 0.06315569592175052 LQQVLQMESHIQSTSDR Oxidation (M) 2014.9742 0.97420254 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9;J3QKQ5 KPNB1 Importin subunit beta-1 yes no 0 1 0 5.5 0.5 1 1 49.599 49.676 3 5.5146E-07 13727 20230619_1886_Aki_TMTPro18x_K_F6 117.3 96.647 19962 16265 16570 23761 24775 21733 20654 21198 20863 23620 23038 24557 25162 20741 20406 21300 23383 25613 18432 14950 17273 23334 24935 22128 21073 21765 21358 23761 23636 24741 25381 21561 21003 21637 22360 24273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236280000 17240 3904 16337 32737;32738 26225 26225 2578 1 9606 Homo sapiens 0.007314406931527628 LQQVLQMESHIQSTSDR Unmodified 1998.9793 0.97928792 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9;J3QKQ5 KPNB1 Importin subunit beta-1 yes no 0 0 0 7.5 0.5 1 1 56.272 56.329 3 1.6228E-48 16288 20230619_1887_Aki_TMTPro18x_K_F7 283.83 250.52 118770 87298 117260 129250 91031 124620 118460 112590 113760 139480 130410 140650 154080 123430 112440 141690 144220 183180 109740 80288 118940 126960 97524 125990 117770 116630 116970 139510 134090 142080 154480 128980 117000 144310 137950 173400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3402799999.9999995 17241 3904 16337 32739;32740 26226 26226 1 9606 Homo sapiens 0.019757445557615938 LQQVLTGLR Unmodified 1026.6186 0.61857879 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;A0A804HI02;B4DE53;A0A804HJU6;A0A0J9YVR1;A0A0J9YWI5;I3L439;I3L163;A0A0J9YYG2;A0A0J9YVU1 TBCD Tubulin-specific chaperone D yes no 0 0 0 5 0 1 57.002 57.064 2 0.00074938 16735 20230619_1885_Aki_TMTPro18x_K_F5 124.74 79.782 81121 71547 80809 72243 79172 106000 87658 83739 112670 35452 38766 34772 32814 26297 55824 36042 38171 30424 75044 65505 82063 73389 82781 104080 88614 85796 110150 38561 43014 35106 34786 27919 55275 35815 36639 28985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91235000 17242 1722 16338 32741 26227 26227 1 9606 Homo sapiens 0.10633424605543951 LQQYYIFIPSK Unmodified 1398.7547 0.75473792 633 Q53GJ1;Q9H4E3;A0A024RAS3;Q9H0S4-2;Q9H0S4;F5H1N9 E4-DBP;hCG_27698;DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 0 0 0 5 0 1 62.843 62.89 3 0.011914 19261 20230619_1885_Aki_TMTPro18x_K_F5 57.019 41.129 100550 66889 49935 75562 61758 71478 67775 59534 74001 83085 66609 63441 88638 54171 63485 104340 74832 84557 92484 61370 55264 75515 63543 72338 68141 62317 74851 82106 69612 65041 88440 58928 65857 102800 71556 80487 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295190000 17243 633 16339 32742 26228 26228 1 9606 Homo sapiens 0.0713107432554807 LQRPFLR Unmodified 928.56067 0.56066998 4427 Q9BSK0 MARVELD1 MARVEL domain-containing protein 1 yes yes 0 0 1 7.5 0.5 1 1 40.107 40.134 3 0.0029981 9290 20230619_1887_Aki_TMTPro18x_K_F7 114.19 43.157 260700 246380 231180 267850 255320 233390 251970 256190 259040 252400 286630 288570 270140 236550 322930 279020 309270 280910 241070 225660 237800 268380 262860 239390 254570 260150 264590 256310 292240 289590 278760 247910 326440 279990 295840 266900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150330000 17244 4427 16340 32743;32744 26229;26230 26229 2 9606 Homo sapiens 0.09353207470803682 LQSAGSAMPTSSSFK Unmodified 1497.7133 0.71334339 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B3KME6;Q6AZE1;H0Y4T4 CEP170 Centrosomal protein of 170 kDa yes no 0 0 0 2 0 1 51.102 51.147 3 2.2424E-05 14946 20230619_1881_Aki_TMTPro18x_K_F2 103.17 83.431 70321 57159 72252 72070 65469 77150 68248 73950 86288 68123 69134 68369 77834 61017 75296 81210 77039 66963 65036 52455 73129 71633 68678 77540 69245 75605 86163 69203 72124 69188 79016 64252 76735 80477 73624 63790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127550000 17245 1960 16341 32745 26231 26231 1 9606 Homo sapiens -0.015604744960910466 LQSEPESIR Unmodified 1057.5404 0.54038805 3421 P09496-2;P09496-4;P09496-3;P09496;F8WF69 CLTA Clathrin light chain A yes no 0 0 0 2.5 0.5 1 1 39.495 39.55 2 6.3501E-16 9559 20230619_1881_Aki_TMTPro18x_K_F2 191.17 109.98 56701 39852 60779 70230 72642 78164 77688 78971 97955 81713 97324 100300 96242 83756 88468 89598 108330 104900 52415 36743 61645 68477 74647 78410 78654 80696 98547 83026 99849 100410 97921 87253 91195 90805 103430 99489 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87871000 17246 3421 16342 32746;32747 26232;26233 26232 2 9606 Homo sapiens 0.01391947229649304 LQSEPESIRK Unmodified 1185.6354 0.63535107 3421 P09496-2;P09496-4;P09496-3;P09496;F8WF69 CLTA Clathrin light chain A yes no 0 0 1 5.5 0.5 1 1 39.576 39.665 3 1.3072E-05 9403 20230619_1886_Aki_TMTPro18x_K_F6 129.74 89.153 569600 473440 549410 585650 632000 580910 655270 558010 830650 687950 763430 756050 863430 679890 685590 798050 808380 752820 526590 434360 561130 582190 649900 587670 664450 575560 833250 690820 790560 762000 869320 710210 707650 797290 771890 715710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1303900000 17247 3421 16343 32748;32749 26234 26234 1 9606 Homo sapiens 0.04995880700835187 LQSIGTENTEENR Unmodified 1489.7009 0.70086445 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;H3BR04;H3BUH7;H3BMQ8 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 2 0 1 41.482 41.558 2 1.2178000000000002E-35 10504 20230619_1881_Aki_TMTPro18x_K_F2 273.3 227.93 95906 56963 75879 97077 94227 122810 98570 95794 144600 129900 151270 158110 151120 130290 124150 141840 170670 170500 88376 52537 79178 94958 96828 121510 100520 100660 144900 130380 154870 158240 153010 135950 129380 143910 162850 161640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149310000 17248 3378 16344 32750 26235 26235 1 9606 Homo sapiens -0.02439794634778991 LQSIGTENTEENRR Unmodified 1645.802 0.80197548 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;H3BR04;H3BUH7;H3BMQ8 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 1 3 0.816 1 1 1 36.434 36.487 3 8.859E-29 8156 20230619_1882_Aki_TMTPro18x_K_F3 250.46 160.07 387400 349720 383100 375120 492130 515940 476340 439320 522780 514060 553010 530730 552680 401830 762870 505320 508070 511270 358420 320320 391120 378720 501910 509480 482540 456070 531260 516040 566320 533640 573270 424550 756540 507320 488600 485530 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1546699999.9999998 17249 3378 16345 32751;32752;32753 26236;26237;26238;26239 26237 4 9606 Homo sapiens 0.004906570679167999 LQSQLLSLEK Unmodified 1157.6656 0.66558856 3619 P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96;K7EMQ3;B4DJ53 DNM2 Dynamin-2 yes no 0 0 0 1 0 1 59.029 59.029 2 1.1305E-09 18103 20230619_1880_Aki_TMTPro18x_K_F1 209.21 0 155610 134920 145570 169290 133110 161130 166170 164410 186400 142020 130080 124780 137350 108610 168970 156940 150520 141120 143860 123780 148690 168020 140280 163590 166230 167190 186390 144270 136500 127000 141420 115160 170180 156080 144130 134230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 234310000 17250 3619 16346 32754 26240;26241 26240 2 9606 Homo sapiens 0.09306239366060254 LQSQPTDTDGGR Unmodified 1273.5899 0.58985744 2704 B7Z947;Q8N397;H7BY83;Q5JSH3-4;Q5JSH3-2;Q5JSH3 WDR44;DKFZp761M142 WD repeat-containing protein 44 yes no 0 0 0 2 0 1 33.908 33.965 2 7.5311E-05 7255 20230619_1881_Aki_TMTPro18x_K_F2 124.67 106.8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17251 2704 16347 32755 26242 26242 1 9606 Homo sapiens -0.03599389552232424 LQSRPAAPPAPGPGQLTLR Unmodified 1926.0799 0.079928661 178 A0A024R1Z6;Q99536;K7ERT7 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes no 0 0 1 5.5 0.5 1 1 45.873 45.955 3 1.027E-10 12095 20230619_1886_Aki_TMTPro18x_K_F6 141.05 117.2 117720 128160 126340 137760 157020 128410 155490 167330 139470 151650 168520 146770 157660 128580 169100 182560 207940 163790 109140 117320 128110 138310 160160 131620 156430 167790 144210 153840 170980 148790 161810 136090 173950 181500 198270 155930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 402580000 17252 178 16348 32756;32757 26243 26243 1 9606 Homo sapiens 0.15393189391556916 LQSSNIFTVAK Unmodified 1206.6608 0.66083754 3819 Q10567-4;Q10567-3;Q10567-2;Q10567;B4DS79;B4DG47;Q7Z3M8;B4DKH5 AP1B1;DKFZp686A01208 AP-1 complex subunit beta-1 yes no 0 0 0 3 0 1 56.966 56.999 3 0.0010023 17179 20230619_1882_Aki_TMTPro18x_K_F3 76.326 10.831 71392 61108 72837 75507 71936 79344 70980 73300 87155 71447 76346 72382 83135 62134 80497 85936 73425 80630 66045 56057 73863 75125 74786 79808 72152 75260 87411 72367 79119 73146 84441 65723 81545 85661 70371 76613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110950000 17253 3819 16349 32758 26244 26244 1 9606 Homo sapiens 0.06577355223271297 LQSSQEPEAPPPR Unmodified 1434.7103 0.71030693 599 Q9UNF1;A0A024R9Y7;Q5H907;Q5H909;Q9UNF1-2;B4DX55;B4DWM5 MAGED2 Melanoma-associated antigen D2 yes no 0 0 0 2 0 1 37.663 37.723 2 8.3105E-08 8779 20230619_1881_Aki_TMTPro18x_K_F2 143.97 123.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17254 599 16350 32759 26245 26245 1 9606 Homo sapiens 0.010340184413962561 LQSTFVFEEIGR Unmodified 1424.73 0.72997974 1097 P51659;A0A0S2Z4J1;B2R659;E7EPL9;A0A804HK65;A0A2R8YD50;P51659-2;P51659-3;B4DSD0;B4DDM5;A0A2R8Y7L2;B4DI68;E7ET17;B3KSP2;A0A804HIR1;Q59H27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 0 0 0 7 0 1 62.103 62.138 2 2.2646E-05 18794 20230619_1887_Aki_TMTPro18x_K_F7 159.99 112.14 137930 114230 138500 132260 111710 143380 151320 145460 167380 156880 165980 165120 186640 144190 181070 200810 163260 191780 127550 104730 140240 132300 119370 144160 150800 148780 169520 158200 171300 166650 189440 152470 183360 200310 156580 182140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92038000 17255 1097 16351 32760 26246 26246 1 9606 Homo sapiens 0.03460394452190485 LQSVLGK Unmodified 743.45414 0.45413923 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4H4;A0A7I2V4Y9;B3KTX4;A8K8J9;F8W1I6 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 0 0 3 0 1 52.967 53.026 2 0.020548 15495 20230619_1882_Aki_TMTPro18x_K_F3 110.31 17.839 445620 384250 423280 455670 429580 503300 491490 482230 602090 522100 573850 586050 532150 471490 495650 570750 658050 572840 412020 352330 432200 454990 447790 504830 495360 495230 605640 527590 588310 588160 543040 495240 513990 571890 627450 544380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 504670000 17256 1406 16352 32761 26247 26247 1 9606 Homo sapiens 0.07215032185615655 LQTAPVPMPDLK Unmodified 1308.7112 0.71115855 597 P10636-3;A0A024RA19;A0A0G2JMX7;A0A0G2JS76;A0A024R9Y1;A0A0G2JPD5;A0A0G2JQJ7;A0A7I2PLE3;A0A024RA17;A0A7P0T936;A0A024R9Y0;I3L170;B3KTM0;A0A7I2PJZ2;P10636-5;P10636-7;P10636-6;P10636-8;P10636-4;P10636-2;P10636;P10636-9;B4DSB3 MAPT Microtubule-associated protein tau;Microtubule-associated protein yes no 0 0 0 4.5 3.5 1 1 59.018 59.018 3 0.00010154 18078 20230619_1880_Aki_TMTPro18x_K_F1 110.92 93.191 56547 50237 60304 67459 33241 45384 65192 61560 76561 75452 72575 77844 78620 65699 67979 87784 83103 91762 52344 46119 60603 66429 37588 47916 64237 62187 77179 75567 74944 78501 79554 69353 70261 88016 79426 87082 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179350000 17257 597 16353 32762;32763 26248;26249 26248 2 9606 Homo sapiens 0.06915141556760318 LQTASDESYK Unmodified 1140.5299 0.52988294 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4 0 1 43.546 43.59 2 1.6325E-05 11111 20230619_1883_Aki_TMTPro18x_K_F4 162.38 100.42 21957 15123 21563 23313 27399 34478 25099 28070 41288 27758 37724 66473 58074 57029 27253 38549 87221 114410 20280 13920 22041 22998 28004 33844 25940 29116 40968 29285 39911 65290 57285 58231 31624 43219 83060 107760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13842000 17258 1022;3868 16354 32764 26250 26250 1 9606 Homo sapiens -0.034760802154323756 LQTASDESYKDPTNIQLSK Unmodified 2137.0539 0.053892649 1022 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 1 7 0 1 52.309 52.383 3 3.685E-11 14643 20230619_1887_Aki_TMTPro18x_K_F7 144.01 127.71 184770 175450 194300 234840 59794 65325 137480 133270 126040 169910 220940 235420 170800 172930 235540 173990 197940 236440 171100 161020 194760 230070 74744 80536 134040 132790 132760 171530 220260 233780 179080 180420 235980 178530 190020 223770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109390000 17259 1022 16355 32765 26251;26252 26251 2 9606 Homo sapiens 0.030847858481138246 LQTASDESYKDPTNIQSK Unmodified 2023.9698 0.96982867 3868 Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 1 5.5 0.5 1 1 47.302 47.381 4 4.1677E-06 12655 20230619_1885_Aki_TMTPro18x_K_F5 103.41 91.456 31698 28204 28709 29209 33471 36126 34724 38471 41230 38665 41128 45450 45946 38596 42469 43630 45090 43423 29303 25827 29487 29528 34432 36073 35148 39125 41633 39269 42445 45589 46572 40300 43396 43755 43105 41252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268790000 17260 3868 16356 32766;32767 26253 26253 1 9606 Homo sapiens -0.00119745248775871 LQTEAQEDDWYDCHR Unmodified 1964.7959 0.79590382 4216 Q8TDR3;Q8IYV2;Q9UHI6;Q9H4N4 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 0 0 0 1 0 1 46.146 46.146 3 2.4231999999999997E-19 12769 20230619_1880_Aki_TMTPro18x_K_F1 213.83 203.87 10841 8459 9904.7 11436 12592 14092 14380 13596 13198 14039 15736 17008 17393 14107 13289 15988 18773 14704 10014 7769.8 10192 11336 12911 14033 14356 13937 13618 14251 16105 17030 17503 14745 13901 15959 17881 13995 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28522000 17261 4216 16357 32768 26254 26254 1 9606 Homo sapiens -0.14790229225900475 LQTMKEELDFQK Oxidation (M) 1524.7494 0.74939455 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80;A0A6Q8PGH0 LMNA Prelamin-A/C;Lamin-A/C yes no 0 1 1 5.5 0.5 1 1 50.251 50.327 3 0.0024923 14012 20230619_1886_Aki_TMTPro18x_K_F6 83.474 69.22 164570 141030 159000 216730 339680 262830 313250 285510 255820 235940 274690 190180 179830 138320 289560 140660 124420 89512 152180 129690 165000 213100 336700 262960 315360 288760 264540 239620 276470 193540 191410 144530 282580 139010 120400 85689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102230000 17262 1428 16358 32769;32770 26255 26255 906 1 9606 Homo sapiens 0.008009826807438003 LQTMKEELDFQK Unmodified 1508.7545 0.75447993 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80;A0A6Q8PGH0 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 1 8 0 1 58.029 58.075 3 5.9544E-07 16997 20230619_1888_Aki_TMTPro18x_K_F8 153.7 118.75 396360 344740 386260 489650 543350 628080 650270 818850 268530 605060 333970 460220 445520 349270 677770 309750 307160 187670 366570 316700 396450 484350 553970 628540 638040 816640 299880 617070 346280 468940 461500 361910 662550 306500 296640 179980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145720000 17263 1428 16358 32771 26256 26256 1 9606 Homo sapiens 0.020452865433753686 LQTPGGGSK Unmodified 843.44503 0.4450311 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 8 0 1 39.431 39.419 2 0.00044558 9243 20230619_1888_Aki_TMTPro18x_K_F8 135.55 48.755 24038 12169 28696 25576 40140 52513 41461 52757 44694 32791 47176 51559 43637 39845 41522 19583 51309 49126 22210 11269 28937 25065 40871 50994 41846 53278 45385 34779 48163 51043 44568 40438 42671 21737 48982 46355 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10802000 17264 2830 16359 32772 26257 26257 1 9606 Homo sapiens 0.01704638829301075 LQTPNTFPK Unmodified 1044.5604 0.56039521 3905 Q14978-3;B2RAU8;A0A0A0MRM9;Q14978;Q14978-2;Q96J17 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 0 0 0 2 0.816 1 1 1 49.739 49.769 3 9.7497E-05 14007 20230619_1882_Aki_TMTPro18x_K_F3 120.12 89.865 150720 117780 147610 153600 125500 117610 142780 134090 132710 224610 251880 172630 217510 153230 263000 178370 159840 146910 139300 108140 149870 151730 132360 122120 142800 138310 140780 220370 250880 177090 224800 160190 260480 177390 153840 139920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 438840000 17265 3905 16360 32773;32774;32775 26258;26259 26259 2 9606 Homo sapiens 0.03989742960266085 LQTQGLGTALK Unmodified 1128.6503 0.65027285 4359 Q96HE7;G3V2H0;A0A8I5KWQ1;B2RD00;Q86YB8 ERO1L;ERO1LB ERO1-like protein alpha;ERO1-like protein beta yes no 0 0 0 2 0 1 51.748 51.786 3 0.00023816 15226 20230619_1881_Aki_TMTPro18x_K_F2 107.97 79.223 59926 40897 49917 53110 41406 51174 54971 47593 62634 66868 60270 66242 66391 56299 58781 74650 73550 70290 55278 37570 51438 52603 44121 51802 54869 49417 63318 66526 62257 66916 67222 59368 60807 74429 70207 66819 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66983000 17266 4359 16361 32776 26260 26260 1 9606 Homo sapiens 0.09109372568855179 LQTQVFK Unmodified 862.49125 0.49125301 299 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 RPS9 40S ribosomal protein S9 yes no 0 0 0 2.5 0.5 1 1 49.741 49.808 2 0.039269 13991 20230619_1882_Aki_TMTPro18x_K_F3 95.909 38.807 191800 178340 180160 183010 195640 240680 215920 215080 275940 146830 143390 128990 163580 122760 139400 174090 168010 136730 177410 163270 184280 185290 202840 238400 218270 219630 272040 151790 154130 131740 165150 129580 143940 171930 160260 130380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1386900000 17267 299 16362 32777;32778 26261 26261 1 9606 Homo sapiens 0.05450703731378326 LQTSSVLVSGLR Unmodified 1258.7245 0.72450043 134 A0A024R1A3;P22314-2;P22314;Q5JRR9;Q5JRS0;Q5JRS2;Q5JRS1;Q5JRS3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 4 0 1 54.022 54.038 2 4.0199E-09 15786 20230619_1883_Aki_TMTPro18x_K_F4 202.05 146.38 229950 201010 238800 232050 244910 280030 282590 232580 262780 234260 223960 193890 232620 167040 308390 181160 172010 142700 212790 184260 241940 232470 254850 278460 282030 241050 267260 235520 232030 197750 240360 174060 304010 180140 165690 136050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207080000 17268 134 16363 32779 26262 26262 1 9606 Homo sapiens 0.10548715660388552 LQTVLEK Unmodified 829.49092 0.49091866 2705 E9PS97;B7Z952;Q9NVD7 PARVA Alpha-parvin yes no 0 0 0 8 0 1 52.88 52.955 2 0.0058225 14811 20230619_1888_Aki_TMTPro18x_K_F8 146.27 41.149 122020 93442 107950 122530 132970 152060 152400 141570 183960 163080 165980 165780 180000 147700 162900 195230 204690 179660 112680 85806 111320 121700 136770 151250 153420 145930 184860 163810 171760 167620 182480 155470 168420 194460 195270 170900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146840000 17269 2705 16364 32780 26263 26263 1 9606 Homo sapiens 0.06935284011524345 LQVAGEITTGPR Unmodified 1240.6776 0.67755023 4002;2357 Q53GR7;Q9UJS0;Q9UJS0-2;B7Z2E2;B3KMV8;O75746-2;O75746 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 0 0 0 7 0.816 1 1 1 48.15 48.225 2 4.1444E-10 12759 20230619_1887_Aki_TMTPro18x_K_F7 236.95 194.97 185540 167810 177110 202980 181200 193210 199090 194850 191790 215540 221400 200250 286450 207550 189870 221790 243480 225750 171610 153870 180820 201970 188270 196210 199540 199550 197170 216220 228380 204310 285450 214810 197880 222800 232320 214450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 384210000 17270 4002;2357 16365 32781;32782;32783 26264;26265 26265 2 9606 Homo sapiens 0.06683856109225417 LQVEELLK Unmodified 970.5699 0.56989727 2472 B4DF80;Q9H6R4-4;Q9H6R4;A0A0A0MRW6;Q9H6R4-2;Q9H6R4-3 NOL6 Nucleolar protein 6 yes no 0 0 0 6.5 0.5 1 1 60.588 60.638 2 0.0015813 18413 20230619_1886_Aki_TMTPro18x_K_F6 140.35 18.166 91422 83572 86640 100300 87450 113260 106080 104720 119010 118870 108280 121850 114790 100040 109270 141280 122330 123020 84560 76624 88536 100070 91418 113320 106270 107950 120130 119460 111990 122810 116730 106050 112120 140200 116930 117040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91243000 17271 2472 16366 32784;32785 26266 26266 1 9606 Homo sapiens 0.08343511245800528 LQVEEVHQLSR Unmodified 1336.7099 0.709913 694 A0A024RBT2;Q502X2;A0A0S2Z5U7;Q9NR28-2;Q9NR28;A0A0S2Z5P6;Q9NR28-3;K7X1S0;Q53HB7 DIABLO Diablo homolog, mitochondrial yes no 0 0 0 4.5 0.5 1 1 42.005 42.069 3 1.155E-12 10400 20230619_1885_Aki_TMTPro18x_K_F5 204.34 155.77 38015 29676 36132 40150 41444 45998 46858 43142 49417 41837 47892 45266 48609 35672 41007 46374 44866 43385 35127 27258 36972 39751 42773 45995 46998 44249 50108 42466 49218 45494 49187 37698 42074 46249 42880 41244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 682310000 17272 694 16367 32786;32787 26267 26267 1 9606 Homo sapiens 0.05502643512227223 LQVGGFEHAR Unmodified 1112.5727 0.57269123 4036 Q8NBT6;Q5JPC1;Q9HC21-2;Q9HC21 DKFZp667O1614;SLC25A19 Mitochondrial thiamine pyrophosphate carrier yes no 0 0 0 7 0 1 40.528 40.596 3 9.5967E-06 9497 20230619_1887_Aki_TMTPro18x_K_F7 153.23 106.14 40353 36916 43102 39232 52179 55462 52268 46111 59581 44595 53147 43045 47526 42268 43465 48506 54338 44507 37362 33809 43671 39663 53461 54655 52901 47716 59969 45151 54513 43795 48517 43945 44894 48412 51817 42351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35688000 17273 4036 16368 32788 26268 26268 1 9606 Homo sapiens 0.020907794233153254 LQVLPELLFQSTPK Unmodified 1611.9236 0.92359416 3293 O75094-2;O75094-3;O75094;O75094-4 SLIT3 Slit homolog 3 protein yes no 0 0 0 3 0 1 64.99 65.022 3 0.0093129 20551 20230619_1882_Aki_TMTPro18x_K_F3 66.285 52.027 12002 12359 12842 10313 9807.4 12252 9467.5 12623 12995 12456 12213 13832 12745 12528 16158 17618 13776 16444 11122 11293 12913 10629 10435 12258 9692.8 12854 13011 12639 12610 13941 13164 13224 16249 17552 13222 15621 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12723000 17274 3293 16369 32789 26269 26269 1 9606 Homo sapiens 0.14210931168372554 LQVLVEEAFGCQLQNR Unmodified 1902.9622 0.96218129 3078 H3BTB7;Q5JPH6;Q5JPH6-2;O14563 EARS2;A-735G6.3 Probable glutamate--tRNA ligase, mitochondrial yes no 0 0 0 8 0 1 65.37 65.389 3 2.1618E-14 20107 20230619_1888_Aki_TMTPro18x_K_F8 171.76 160.95 6323.1 4751.1 6771.5 8068.7 5901.6 5901.1 7119.7 5578.9 5793.4 7542.1 8783.3 9341.8 7749.4 6656.7 8194.9 7853.3 7512.4 8308.9 5847.2 4377 6835.4 7840.9 6220.4 6123.2 7069.1 5785.8 6100.1 7566.5 8832.2 9306.4 7960.3 7016.9 8286.3 7900.1 7200 7884.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8722000 17275 3078 16370 32790 26270 26270 1 9606 Homo sapiens 0.046818687406130266 LQVTEHLPEK Unmodified 1192.6452 0.64518747 4566 Q9NPL8;C9JU35 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes no 0 0 0 5 0 1 46.081 46.158 3 0.015048 12120 20230619_1885_Aki_TMTPro18x_K_F5 69.451 53.226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17276 4566 16371 32791 26271 26271 1 9606 Homo sapiens 0.05657068706227619 LQVTNVLSQPLTQATVK Unmodified 1839.0466 0.046562847 1878 B2RE46;A0A994J5J1;P04844-2;P04844;B4DJL0;Q5JYR4;Q5JYR7 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 0 0 4.5 0.5 1 1 61.6 61.626 4 4.4477E-06 19048 20230619_1883_Aki_TMTPro18x_K_F4 104.44 60.242 30896 27750 29262 35185 30824 35008 34812 36374 37951 35728 38319 35242 34846 31088 40873 38168 37282 39680 28573 25459 29924 34914 32011 35441 34973 37048 38489 36126 39141 35678 35966 32578 41245 38336 35723 37663 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41104000 17277 1878 16372 32792;32793 26272 26272 1 9606 Homo sapiens 0.16060142829019242 LQVVDQPLPVR Unmodified 1262.7347 0.73467118 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 7.5 0.5 1 1 53.147 53.218 2 2.821E-07 14888 20230619_1888_Aki_TMTPro18x_K_F8 163.38 116.32 228650 206400 215010 216270 157090 201550 201650 204910 226390 290890 286060 264060 292660 241960 248330 311630 271450 287960 211460 189010 218690 217560 169230 205070 201680 211410 231870 288440 290780 268610 296300 254030 254940 310530 259610 273690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1143300000 17278 3606 16373 32794;32795 26273;26274 26274 2 9606 Homo sapiens 0.113813233855808 LQWDLGLGHLPR Unmodified 1403.7674 0.76736829 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9;B3KY97 RRP12 RRP12-like protein yes no 0 0 0 3 0 1 59.745 59.774 3 4.9301E-18 18285 20230619_1882_Aki_TMTPro18x_K_F3 228.93 190.65 26028 24349 25858 25311 22946 29303 28315 28626 29108 31419 21242 20209 36239 25839 24181 38679 26779 30263 24088 22294 26241 25552 24235 29313 28266 29353 29345 31266 22809 21242 35908 27171 25026 38145 25621 28821 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76031000 17279 2355 16374 32796 26275 26275 1 9606 Homo sapiens 0.08163530508454642 LQWFCDR Unmodified 1023.4596 0.45963531 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJG8;A0A804HI44 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 1.5 0.5 1 1 56.448 56.457 2 0.0059072 17181 20230619_1881_Aki_TMTPro18x_K_F2 137.18 112.55 430850 385730 405220 386290 322010 405710 431520 421480 427760 432420 364330 367100 420320 355360 409500 461810 429740 427490 398430 353120 412480 390690 344340 409240 428730 429780 433700 434400 379400 375320 426740 372620 418000 460290 410960 406400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 443590000 17280 1723 16375 32797;32798 26276;26277 26277 2 9606 Homo sapiens -0.05115612294230232 LQWFQNHLDPQK Unmodified 1552.7787 0.77866126 3034 H0Y9X1;Q96EY4;D6RA57;D6RE67;D6RC31;B7Z504 TMA16 Translation machinery-associated protein 16 yes no 0 0 0 2.5 0.5 1 1 56.872 56.898 3 1.1786E-05 17370 20230619_1881_Aki_TMTPro18x_K_F2 133.32 112.07 59679 53876 55905 54853 44747 61682 61744 51842 65252 66438 57472 57178 64557 51871 61284 75513 67577 67403 55190 49326 56950 55437 47917 61631 61364 54060 65997 66095 59654 58302 65500 54945 62802 75003 64595 64106 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73303000 17281 3034 16376 32799;32800 26278 26278 1 9606 Homo sapiens 0.02438307811917184 LQYEGIFIK Unmodified 1109.6121 0.61209643 146 A0A024R1K8;Q15459;Q15459-2;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 1.5 0.5 1 1 61.462 61.472 2 2.1859E-10 19067 20230619_1880_Aki_TMTPro18x_K_F1 179.37 125.9 176540 152860 171040 190330 165460 203080 191100 177560 210280 187400 187250 167530 184640 165220 202620 205280 182730 199450 163260 140230 174270 189270 173170 203760 191770 183490 212170 188360 193030 171020 189420 172610 204650 205320 175150 189440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101910000 17282 146 16377 32801;32802 26279;26280 26279 2 9606 Homo sapiens 0.061674866541807205 LRAELDEVNK Unmodified 1185.6354 0.63535107 1473 Q03252;A0A384NPH0 LMNB2 Lamin-B2 yes no 0 0 1 4.5 0.5 1 1 45.295 45.356 3 1.4499E-05 11846 20230619_1883_Aki_TMTPro18x_K_F4 127.7 96.325 612850 469860 559430 563320 547940 589900 676850 658710 777620 702550 811720 779570 817680 692170 739420 830910 811560 733670 566050 431070 572630 561820 573580 596160 678090 669380 787410 710080 831230 785320 830610 723990 757730 827160 775260 698160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1063699999.9999999 17283 1473 16378 32803;32804 26281;26282 26281 2 9606 Homo sapiens 0.04995880700857924 LRAEPDHMVLGK Oxidation (M) 1380.7184 0.71836919 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2;Q7L4K8 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 1 1 7 0 1 38.942 39.006 4 0.032005 8829 20230619_1887_Aki_TMTPro18x_K_F7 69.602 49.861 78251 60223 67882 68340 87827 85618 80728 80825 96939 83657 88594 91120 95507 78029 83995 105930 99838 103880 72250 55222 70106 68599 89417 85200 82301 82963 97498 84649 91604 91762 96708 82404 86612 105810 95399 98677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141260000 17284 1736 16379 32805 26283 26283 1136 1 9606 Homo sapiens 0.04323874157194041 LRAEPDHMVLGK Unmodified 1364.7235 0.72345457 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2;Q7L4K8 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 1 7.5 0.5 1 1 43.168 43.213 4 0.0039567 10778 20230619_1888_Aki_TMTPro18x_K_F8 81.565 69.42 139650 113660 128530 128710 104500 123460 123330 124810 144930 152760 157040 164240 167400 141390 157080 196800 190320 198060 129040 104200 131130 128740 111070 125290 124000 128180 146960 153210 161070 165490 170060 149540 161970 196810 181830 188070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192070000 17285 1736 16379 32806;32807 26284 26284 1 9606 Homo sapiens 0.05568178019802872 LRAESDFVK Unmodified 1063.5662 0.56620887 3896 Q14684;Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 1 6.5 0.5 1 1 43.76 43.847 3 0.0051055 10857 20230619_1887_Aki_TMTPro18x_K_F7 66.603 26.171 430130 384300 438220 448350 503000 528920 470410 491230 553660 420190 472180 426580 486180 356950 478260 470580 527210 425790 398020 352280 445460 448670 516330 527980 478860 502480 555730 428880 488660 430780 495080 376700 489070 468620 503250 405260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 205010000 17286 3896 16380 32808;32809 26285;26286;26287 26287 3 9606 Homo sapiens 0.036968414719467546 LRAESEVPIVK Unmodified 1239.7187 0.71868677 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;Q6AZE1;H0Y4T4;E7EMW0;E7EWM2;Q96L14;Q9NSN9;B2R9B7 CEP170;CEP170P1;DKFZp564B0982 Centrosomal protein of 170 kDa;Cep170-like protein yes no 0 0 1 6.5 0.5 1 1 46.114 46.199 3 0.0037555 11828 20230619_1887_Aki_TMTPro18x_K_F7 73.624 30.539 434930 350860 398180 465280 411950 504560 440740 395350 509750 513380 532660 606240 540080 430690 513070 607190 666020 672470 401850 322170 408200 460740 428140 504580 444840 414900 516430 515350 546280 605060 549690 459560 531160 610630 635810 638000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 390470000 17287 1960 16381 32810;32811 26288 26288 1 9606 Homo sapiens 0.10841617148707883 LRAETEQGEQQR Unmodified 1443.7066 0.70661853 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 1 1.5 0.5 1 1 29.126 29.162 3 0.00016358 5366 20230619_1881_Aki_TMTPro18x_K_F2 110.38 65.615 8874.5 5500.6 10309 9646.1 16321 16308 15905 18714 16492 11459 17071 16573 15304 11744 17306 6305.2 15088 14820 8204.6 5074.1 10441 9487.1 16444 16032 16080 18740 16766 12122 17413 16420 15755 12002 17378 6937.8 14456 13987 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78909000 17288 3921 16382 32812;32813 26289 26289 1 9606 Homo sapiens 0.0025134866755252006 LRDAFTWNMNEK Oxidation (M) 1539.714 0.71401209 3016 Q12824;Q12824-2;G5E975;Q9H836;A0A0G2JRV3;C9JTA6 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes no 0 1 1 1 0 1 50.835 50.835 3 0.040789 14702 20230619_1880_Aki_TMTPro18x_K_F1 56.938 45.667 34262 37336 39803 31150 41362 45858 43129 39657 42616 39119 44800 43072 39704 35720 47108 37583 44384 42145 31789 34111 39946 32212 42862 45146 43375 40923 43516 39691 45650 43297 41043 37183 47568 38028 42477 39989 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47753000 17289 3016 16383 32814 26290 26290 1776 1 9606 Homo sapiens -0.03425635056396459 LRDDFEK Unmodified 921.4556 0.45559579 1525 A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 0 0 1 3.5 1.12 1 1 1 1 42.566 42.634 3 0.027424 10702 20230619_1882_Aki_TMTPro18x_K_F3 72.23 34.502 1564000 1089000 1277800 1482800 1594800 1803900 1781900 1718000 2131100 1850600 2013500 1992000 2223400 1817800 1710000 2248000 2251400 1883300 1442700 1000800 1328200 1468800 1637900 1797300 1795800 1764500 2145900 1868200 2079800 2010800 2238200 1903200 1780600 2230300 2146400 1794000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6628899999.999999 17290 1525 16384 32815;32816;32817;32818 26291;26292 26291 2 9606 Homo sapiens -0.008273785162828062 LRDDTEAAIR Unmodified 1158.5993 0.59929991 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 1 2.5 0.5 2 2 36.358 36.414 2;3 2.2008E-06 8143 20230619_1882_Aki_TMTPro18x_K_F3 180.09 114.87 250020 202650 228770 223830 169500 171050 125600 134170 154450 254190 403440 455780 295680 317390 362570 323560 455320 439770 231010 185740 233090 223700 179590 176330 130580 143100 165680 256350 397920 448600 308820 331970 372400 331700 434650 416520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 775770000 17291 1958 16385 32819;32820;32821;32822 26293;26294 26294 2 9606 Homo sapiens 0.026344235239776026 LRDEIEEK Unmodified 1030.5295 0.52948901 1036 O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;A0A7I2V581;Q57Z91;O60282-2;A0A7I2V352;A0A7I2YQQ7 KIF5C Kinesin heavy chain isoform 5C;Kinesin-like protein yes no 0 0 1 2.5 0.5 1 1 41.006 41.073 3 0.0071929 10295 20230619_1881_Aki_TMTPro18x_K_F2 90.108 11.174 177550 128670 168270 200800 192280 179990 200010 187540 253600 207730 220120 217980 240750 167450 197720 229530 254630 227430 163990 118420 172230 196470 197870 183780 202810 191710 253880 209230 228260 219150 242830 177850 205110 229440 242890 216140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236260000 17292 1036 16386 32823;32824 26295 26295 1 9606 Homo sapiens 0.015445448553691676 LRDEIMALR Unmodified 1115.6121 0.61211321 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A494C1D7;Q03001-9;B4DSS9;Q03001-3;Q6P0N6;B4DGY0;Q03001-13 DST Dystonin yes no 0 0 1 8 0 1 49.041 49.107 3 0.038171 13150 20230619_1888_Aki_TMTPro18x_K_F8 59.067 37.561 29981 25225 31477 26913 26177 28947 31874 29873 38492 30537 29908 29589 32013 29097 31143 32141 32887 32069 27739 23110 31743 27095 27765 29149 32013 30476 38475 30817 31184 30068 32583 30185 31785 32247 31443 30463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67854000 17293 1693 16387 32825 26296 26296 1 9606 Homo sapiens 0.05893163382529565 LRDFVLVK Unmodified 988.60695 0.60695147 3226 O14929;O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit yes no 0 0 1 3.5 0.5 1 1 53.853 53.887 3 0.0017959 15730 20230619_1883_Aki_TMTPro18x_K_F4 115.71 115.71 309960 257080 277900 295770 307050 406410 337400 339480 410460 202290 168340 124230 154160 121680 227750 180460 165670 125870 286390 235690 285620 296960 318160 400830 340510 347680 403760 209880 183370 129860 161290 128750 226600 177510 158840 120270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 538620000 17294 3226 16388 32826;32827 26297 26297 1 9606 Homo sapiens 0.11219227582239455 LRDLEDSLAR Unmodified 1186.6306 0.63060004 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 1 4.2 1.17 2 1 1 1 48.858 48.925 3 3.35E-07 13269 20230619_1885_Aki_TMTPro18x_K_F5 181.53 111.71 569750 466160 507500 623990 752230 894170 900860 859960 1023300 771680 840320 875570 958340 754590 844130 958040 837260 878000 526360 428060 525480 620440 766610 882450 902680 878340 1027400 788250 876210 880400 968510 793180 860650 954730 801430 834630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5862999999.999999 17295 1428 16389 32828;32829;32830;32831;32832 26298;26299;26300 26300 3 9606 Homo sapiens 0.04474996558087696 LRDLGALTPDER Unmodified 1354.7205 0.72047768 4116 Q6P158;H7C109;Q59G60 DHX57 Putative ATP-dependent RNA helicase DHX57 yes no 0 0 1 5 0 1 47.164 47.24 3 0.06209 12550 20230619_1885_Aki_TMTPro18x_K_F5 46.132 31.442 41983 36521 37433 39419 44665 49337 40323 44494 50918 34243 31222 29418 32793 25274 40565 34900 38976 28007 38801 33457 38520 39714 45736 49035 41239 45497 50458 35041 33039 29964 33782 26722 40988 34553 37231 26714 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30821000 17296 4116 16390 32833 26301 26301 1 9606 Homo sapiens 0.05730626166655384 LRDLHPDLEGQLK Unmodified 1532.8311 0.83109076 2154 A8KAK1;Q9NYU2-2;Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 1 6.5 0.5 1 1 47.496 47.581 4 0.0029565 12464 20230619_1887_Aki_TMTPro18x_K_F7 82.515 38.327 282040 236650 269420 293760 207450 249780 257310 266050 296140 311670 306390 277110 361900 257400 245670 434490 335830 297000 260740 217110 273940 291430 221960 256280 257930 271950 300050 311450 315950 282650 361820 275570 257880 425490 320180 283700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 686890000 17297 2154 16391 32834;32835 26302;26303 26303 2 9606 Homo sapiens 0.08598846154905004 LRDLQEAFQR Unmodified 1274.6731 0.67313356 2420 B3KUH0;Q8WUX9;E5RJI3;E5RIU9;Q8WUX9-2 CHMP7 Charged multivesicular body protein 7 yes no 0 0 1 1 0 1 49.927 49.927 3 0.00016466 14324 20230619_1880_Aki_TMTPro18x_K_F1 123.11 89.849 33465 28348 34632 35733 27224 38656 35892 34421 35702 38018 43679 41620 45489 38889 42040 46031 46258 47479 30960 26011 34990 35517 29152 38747 35699 35565 36699 38339 44508 42019 46204 40584 43065 46213 44227 45076 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12681000 17298 2420 16392 32836 26304 26304 1 9606 Homo sapiens 0.04678391686320538 LRDPAQQVR Unmodified 1081.5992 0.59924033 2356 B4E0B7;B3KMS0;Q15021;B3KY03 NCAPD2 Condensin complex subunit 1 yes no 0 0 1 7.5 0.5 1 1 32.863 32.907 3 0.0011465 6448 20230619_1887_Aki_TMTPro18x_K_F7 86.882 68.614 137330 111990 128720 121170 169230 189240 141120 151470 212640 97955 94637 97478 91883 80952 116090 95145 114170 81456 126920 102620 132030 122550 172010 185330 146070 155840 207560 102110 102590 98445 95104 84763 117390 94707 109030 77632 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79996000 17299 2356 16393 32837;32838 26305;26306 26305 2 9606 Homo sapiens 0.06170468314644495 LRDPDSHIVK Unmodified 1178.6408 0.6407708 1265 A0A6Q8PHL8;A0A6Q8PH45;A0A1B0GUA3;Q96EK5;A0A6Q8PGG2 KIAA1279 KIF1-binding protein yes no 0 0 1 6.5 0.5 1 1 37.42 37.487 4 0.0071814 8267 20230619_1887_Aki_TMTPro18x_K_F7 77.64 35.639 233300 166030 204880 223790 238300 244380 233830 240630 295300 269670 280870 252730 311040 248630 230350 333810 308080 281750 215330 152560 211070 221490 244780 245490 237940 246820 296790 270560 289870 257460 312630 261130 240510 330860 293840 268260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 78551000 17300 1265 16394 32839;32840 26307;26308;26309 26309 3 9606 Homo sapiens 0.05859604283318731 LRDQLGTAK Unmodified 1000.5665 0.56654322 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 1 0 1 39.089 39.089 3 0.00020624 9677 20230619_1880_Aki_TMTPro18x_K_F1 132.25 83.453 574420 390770 508580 558820 733880 656980 693110 674770 855300 434170 523760 467370 429840 341790 576580 421530 606800 458370 530090 359370 525670 551680 742520 657450 705730 681720 847440 453360 548780 469100 448740 361070 584460 424890 579270 435520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 586520000 17301 3881 16395 32841 26310 26310 1 9606 Homo sapiens 0.06628261191815454 LRDTDTLDLSGPAR Unmodified 1528.7845 0.7845345 3272 Q5SQH4;O60231;A0A140T947;Q6PKC8 DBP2;DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 0 0 1 5 0 1 44.838 44.916 3 0.00067437 11619 20230619_1885_Aki_TMTPro18x_K_F5 89.506 80.811 26187 20919 26496 28544 29399 31115 27414 29574 40178 32808 36110 33402 37683 27008 34063 33578 39051 32331 24213 19215 26942 28227 30266 31232 28156 30400 40027 33017 37284 33675 38208 28439 34970 33572 37269 30746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30245000 17302 3272 16396 32842 26311 26311 1 9606 Homo sapiens 0.04129361532955045 LRDTEEMLSK Unmodified 1220.6071 0.60708741 4512 Q9H444 CHMP4B Charged multivesicular body protein 4b yes yes 0 0 1 5 0.816 1 1 1 47.31 47.389 3 0.00051733 12629 20230619_1885_Aki_TMTPro18x_K_F5 108.56 64.376 138610 122530 132940 142630 137620 160210 154360 155430 183410 172150 175930 166840 205530 150840 167680 212840 181700 162650 128190 112320 135660 142650 143140 160560 155580 159550 184920 172960 182060 169200 206870 159440 172190 209960 173580 155090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52657000 17303 4512 16397 32843;32844;32845 26312;26313 26313 2 9606 Homo sapiens 0.005608147292605281 LRDVLQQR Unmodified 1026.5934 0.59342667 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3;Q5CAQ4;I3L0K7;I3L239 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 1 2.5 0.5 1 1 40.353 40.418 3 0.0016412 9987 20230619_1881_Aki_TMTPro18x_K_F2 104.06 60.249 201220 148620 154850 186570 185370 185140 194970 197370 246500 177430 198720 183980 188540 170580 174630 232230 237380 188170 185600 136440 161790 185270 190430 187650 197560 200280 246050 180720 205570 186240 192270 179530 181590 229750 226180 179370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 160720000 17304 1211 16398 32846;32847 26314 26314 1 9606 Homo sapiens 0.0811936980298924 LRDVLQR Unmodified 898.53485 0.53484916 4358 Q96H79;Q96H79-2 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes no 0 0 1 2 0 1 39.557 39.627 3 0.019649 9640 20230619_1881_Aki_TMTPro18x_K_F2 85.642 28.082 151540 106380 142300 134410 157340 157260 149300 156830 172980 193000 231140 217590 234490 194980 176030 209180 252040 238610 139930 97687 145470 133780 161940 157330 151840 161170 177260 193820 234380 219060 236440 202690 184390 211540 240320 226370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103220000 17305 4358 16399 32848 26315 26315 1 9606 Homo sapiens 0.08152313228515595 LRDYQVR Unmodified 948.51411 0.51411372 2629 B7ZAX9;B4DZC0;O60264;Q4W5G3 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 1 5.33 3.09 1 1 1 34.529 34.552 3 0.0068281 7319 20230619_1888_Aki_TMTPro18x_K_F8 101.6 48.249 535220 369800 516040 537400 683200 654400 653950 668080 653290 478410 638290 626190 557500 500260 595310 537360 734610 557830 494270 340120 528370 530370 694730 653160 661050 676450 664230 498270 652150 625010 573700 521910 611970 540840 700300 530260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 340030000 17306 2629 16400 32849;32850;32851 26316;26317 26317 2 9606 Homo sapiens 0.037797228488557266 LREAAEGLR Unmodified 1013.5618 0.56179219 1292;4740 A0A1S5UZ07;Q9Y490;Q9Y4G6 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 1 6 0 1 37.072 37.14 3 0.00022242 8393 20230619_1886_Aki_TMTPro18x_K_F6 117.7 66.21 76004 66408 72721 72941 100550 97626 88703 93739 109070 82816 97085 97300 89870 78266 90707 99424 100680 87282 70284 60846 74549 73481 101850 96806 90749 95705 109400 84762 99865 97519 92020 82435 92817 98878 96137 83079 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49578000 17307 1292;4740 16401 32852 26318 26318 1 9606 Homo sapiens 0.05555377049040544 LREANQQQQFNR Unmodified 1530.7651 0.76513646 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 7.5 0.5 1 1 32.645 32.645 3 5.4308E-13 6564 20230619_1888_Aki_TMTPro18x_K_F8 167.71 135.09 14878 15720 15435 15870 30007 25348 18141 20837 29361 19216 22558 22338 21316 15721 24845 24294 26254 21567 13787 14384 15842 16144 29658 24836 19322 21539 28985 19623 23413 22325 21953 16891 25275 24125 25073 20531 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48359000 17308 1022;3868 16402 32853;32854 26319;26320 26320 2 9606 Homo sapiens 0.0209845003269038 LRECELSPGVNR Unmodified 1428.7143 0.71434645 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1 SRRT Serrate RNA effector molecule homolog yes no 0 0 1 5.5 0.5 1 1 38.238 38.322 3 1.2374E-05 8829 20230619_1886_Aki_TMTPro18x_K_F6 126.83 100.71 153070 132320 147140 154180 174020 170890 175790 168220 179110 172750 174550 174570 183800 153390 164370 199280 191370 169230 141550 121300 150390 154170 178490 171560 177240 172180 182150 174400 179720 176480 186380 161310 169160 197750 182680 161140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 519410000 17309 4464 16403 32855;32856 26321;26322 26322 2 9606 Homo sapiens 0.017137846634796006 LRECLPLIIFLR Unmodified 1541.9116 0.91158969 2202 Q96IR1;B2R491;P62701;Q53HV1;B7Z1M6 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform yes no 0 0 1 7 0 1 63.233 63.266 3 8.195E-10 19316 20230619_1887_Aki_TMTPro18x_K_F7 182.1 125.98 123050 100350 119720 115030 85857 90955 122920 100960 143720 123820 84835 107520 141540 118750 109810 168580 135550 138190 113750 92001 121350 114720 92846 94090 122380 103160 142960 123500 92454 110280 141210 124740 113960 166720 129460 131560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2571600000 17310 2202 16404 32857 26323 26323 1 9606 Homo sapiens 0.16231035944247196 LREDENAEPVGTTYQK Unmodified 1848.8854 0.88537076 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;B3KSQ7 DBN1 Drebrin yes no 0 0 1 3.5 0.5 1 1 42.274 42.327 3 1.3794E-14 10574 20230619_1882_Aki_TMTPro18x_K_F3 183.7 169.34 478100 374600 439330 471480 481840 548710 487310 484260 528360 643440 700740 711400 744140 631180 606310 670180 727880 732840 441670 343810 450340 469130 497510 547500 492520 503430 543340 643670 712680 716210 751500 655870 626000 676230 695290 695380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1216900000 17311 1396 16405 32858;32859 26324;26325 26324 2 9606 Homo sapiens -0.0051165127488275175 LREDGIQK Unmodified 957.52434 0.52434406 2670 B7SBB1;O00170;D0EKE4;A5JGZ4;A0A804HKH9;D0EKE6;D5LTB3;C8CK04;C8CHN4;C0JXB8;D0EKE5;C0JXB9;C8CK05;A0A804HJ38;A0A804HIX8;D2CVN5;E9PMH2;A0A804HKK3;A0A804HKP8;A0A804HJ46;D0EKE7;A8BQF1;A3RDR8 AIP AH receptor-interacting protein;Peptidyl-prolyl cis-trans isomerase yes no 0 0 1 5.5 0.5 1 1 38.603 38.69 3 0.0069816 8982 20230619_1885_Aki_TMTPro18x_K_F5 90.601 14.537 351860 201210 351060 407270 478550 486230 431730 405090 496660 359130 488740 504010 415310 403190 478410 269990 540750 488250 324740 186090 358900 394880 485450 483560 439930 418430 501370 370120 498850 501300 429590 412200 487590 286410 516420 461620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 286060000 17312 2670 16406 32860;32861 26326;26327 26326 2 9606 Homo sapiens 0.0438828578344328 LREDLER Unmodified 929.49304 0.49304393 3710 P62269;J3JS69 RPS18 40S ribosomal protein S18 yes no 0 0 1 3.5 1.71 1 1 1 1 1 1 34.724 34.775 3 0.0080235 7540 20230619_1881_Aki_TMTPro18x_K_F2 113.14 54.532 613980 482900 523640 558300 692590 690620 659950 662660 873840 695370 736850 689960 814960 664610 648270 793770 852970 683150 566900 442840 542120 559470 705160 687950 673690 679610 872290 701350 765330 700220 821430 693200 674160 789060 812960 650650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3967199999.9999995 17313 3710 16407 32862;32863;32864;32865;32866;32867 26328;26329 26328 2 9606 Homo sapiens 0.025477127493331864 LREDNKTDEGPDTPSYNR Unmodified 2105.9614 0.96138925 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B4DL23;B3KME6 CEP170 Centrosomal protein of 170 kDa yes no 0 0 2 3.5 0.5 1 1 36.979 37.027 4 1.1515E-13 8371 20230619_1882_Aki_TMTPro18x_K_F3 158.58 151.78 68081 45935 62481 76757 60007 77730 68721 61103 64417 90214 93773 101780 101560 88359 95170 95775 95650 90944 62841 42328 63998 74915 62841 78083 68678 64405 67149 89931 95240 102290 103090 91951 96914 95875 91480 86447 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94267000 17314 1960 16408 32868;32869 26330 26330 1 9606 Homo sapiens -0.047352991653497156 LREEMER Oxidation (M) 977.46003 0.46002924 1021 A0A0U1RQP1;A0A0D9SFE4;A0A994J7J4;Q05193-3;Q05193;B4DHH5;A0A0D9SFB1;B7ZAC0;B4DK06;Q05193-5;Q05193-2;Q59GI5;A0A994J5P0 DNM1 Dynamin-1 yes no 0 1 1 1.5 0.5 1 1 26.623 26.662 3 0.083222 4777 20230619_1880_Aki_TMTPro18x_K_F1 60.895 11.306 18882 13980 20722 21633 19955 16800 20943 24519 25528 16827 24968 29250 20335 22662 25364 22666 31189 27257 17463 12864 20883 21156 20773 17535 21216 24313 25677 17796 25479 28905 21186 23564 26008 23046 29758 25855 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10402000 17315 1021 16409 32870;32871 26331 26331 582 1 9606 Homo sapiens -0.029602373650163827 LREENDIAR Unmodified 1114.5731 0.57308516 3986 Q53EZ4;H0Y432;Q53EZ4-2 CEP55 Centrosomal protein of 55 kDa yes no 0 0 1 2 0 1 32.928 32.986 3 8.961E-08 6866 20230619_1881_Aki_TMTPro18x_K_F2 155.58 103.64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17316 3986 16410 32872 26332 26332 1 9606 Homo sapiens 0.02038154352521815 LREETER Unmodified 931.47231 0.47230849 3619 P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96;K7EMQ3;B4DJ53;A0A024R7C9;Q8N1K8 DNM2 Dynamin-2 yes no 0 0 1 1 0 1 27.35 27.35 3 0.075736 4944 20230619_1880_Aki_TMTPro18x_K_F1 54.549 15.758 8049.2 4594.2 13642 10609 17088 11890 11790 16966 12560 7605 18623 19022 10390 13506 16303 5169.2 19365 18659 7471.6 4258.9 13415 10239 17264 12046 12246 16719 12956 8527.5 18472 18599 11178 13664 16580 6121 18494 17582 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34796000 17317 3619 16411 32873 26333 26333 1 9606 Homo sapiens 0.003831223696693087 LREGEEGLR Unmodified 1057.5516 0.55162144 4112 Q6N022 TENM4 Teneurin-4 yes yes 0 0 1 2 0 1 33.528 33.586 3 0.0012637 7111 20230619_1881_Aki_TMTPro18x_K_F2 89.247 37.252 23749 17306 20700 31838 75060 57478 59377 62521 75047 33269 20579 22829 36378 26145 24147 37552 30264 23137 21922 15964 22158 31256 73065 56313 61154 62679 73336 34949 24378 23795 36049 27472 25177 36710 28847 22155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27745000 17318 4112 16412 32874 26334 26334 1 9606 Homo sapiens 0.025147693238068314 LREGEPGWVHPR Unmodified 1431.7371 0.7371308 3330 O94766;Q5U676;B4DNL8;O94766-2;G3V150;E9PNA1 B3GAT3 Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 yes no 0 0 1 6.5 0.5 1 1 36.848 36.915 4 8.9736E-05 8339 20230619_1886_Aki_TMTPro18x_K_F6 119.45 98.219 152810 131910 152730 154280 204410 192580 198660 180550 214400 176330 192170 209840 194900 171710 196280 172500 213850 230700 141350 120940 155930 154510 207800 191660 201040 185210 216560 179520 198500 210110 198960 178480 200400 176680 204560 218440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 112970000 17319 3330 16413 32875;32876 26335;26336;26337 26336 3 9606 Homo sapiens 0.038531718432750495 LREHLVR Unmodified 921.55083 0.55083358 4613 Q9NWH9;H7C3F4;A0A024R5U7;A0A024R5X3;Q9NWH9-3 SLTM SAFB-like transcription modulator yes no 0 0 1 1.5 0.5 1 1 30.036 30.036 3 0.026025 5715 20230619_1881_Aki_TMTPro18x_K_F2 79.469 18.709 28959 22011 30334 30455 40013 38097 38349 34143 47490 35308 38900 39421 37660 33907 30205 37171 48483 37726 26777 20225 30843 30156 40710 37862 39023 35194 47485 35777 40254 39644 38159 35319 31887 37316 46137 35866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10296000 17320 4613 16414 32877;32878 26338;26339 26339 2 9606 Homo sapiens 0.08692019465422618 LREIEENQK Unmodified 1157.6041 0.60405094 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 1 3.5 0.5 1 1 39.817 39.866 3 0.0046384 9515 20230619_1883_Aki_TMTPro18x_K_F4 81.335 46.555 124840 77881 118540 116550 130510 144280 131580 127490 166710 122790 166840 153700 146690 120410 148990 129520 169800 160540 115220 71691 121100 114850 134710 143360 133700 131300 167630 125380 170200 153560 150440 125840 152490 131810 162200 152190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 201330000 17321 1432 16415 32879;32880 26340;26341 26341 2 9606 Homo sapiens 0.03155307666747831 LREIFGLYGQTTGK Unmodified 1581.8515 0.85149185 4052 Q5SQT9;Q9NR31;Q6FID4;B2R679;Q9NR31-2;H0Y5E8 SAR1A;SARA1 GTP-binding protein SAR1a yes no 0 0 1 5 0 1 59.119 59.173 4 0.055546 17589 20230619_1885_Aki_TMTPro18x_K_F5 55.173 32.942 21809 23222 25936 22973 20633 27175 23709 26067 29698 17344 19590 19393 18818 19547 23753 23412 21340 24598 20236 21245 25910 23299 21966 27134 23925 26468 29467 18083 20552 19623 19493 20348 23933 23532 20464 23339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31804000 17322 4052 16416 32881 26342 26342 1 9606 Homo sapiens 0.08384016814693496 LRELGPDGEEAEGPGAGDGPPR Unmodified 2175.0192 0.019238477 1299 A0A1U9X839;A0A1U9X830;P18615;P18615-3;A0A0A0MSN9;B7Z6T4;E9PD43;A0A0A0MT02;A0A0G2JI50 NELFE;RDBP Negative elongation factor E yes no 0 0 1 1 0 1 43.336 43.336 3 3.29E-23 11591 20230619_1880_Aki_TMTPro18x_K_F1 141.36 135.65 24214 22152 23723 26589 28005 29777 29838 30134 29225 32193 31506 33865 32832 28403 32072 34276 38884 38433 22403 20310 24223 26531 28782 29882 29963 30812 29922 32463 32300 34110 33441 29795 33014 34576 37135 36461 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52449000 17323 1299 16417 32882 26343 26343 1 9606 Homo sapiens -0.021270372399612825 LRENELTYYCCK Unmodified 1647.7385 0.73851229 1379 A0A3Q8TLE1;A0A3G2LMK5;A0A3G2LMK3;A0A3G2LMJ8;E9PNW4;A0A2U3TZL5;Q6FHM9;P13987;P13987-2;H0YET2 CD59 CD59 glycoprotein yes no 0 0 1 7.5 0.5 1 1 46.978 47.046 3 6.3209E-07 12313 20230619_1888_Aki_TMTPro18x_K_F8 129.37 116.99 95863 80754 104900 110460 113270 123760 118960 122050 140210 92755 91582 84448 87597 74860 98834 104620 108440 101920 88728 74163 105970 109270 117130 124070 120250 124020 139560 95141 96066 85873 90110 79118 100860 104480 103620 96852 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170280000 17324 1379 16418 32883;32884 26344 26344 1 9606 Homo sapiens -0.0594474296512999 LRENQLPR Unmodified 1024.5778 0.57777661 2873 E5KT65;P19388;B4DJ89;A0A087WWX0;A0A087WVZ9;A0A0A0MQR7 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes no 0 0 1 7.5 0.5 1 1 33.819 33.857 3 0.0012182 7016 20230619_1888_Aki_TMTPro18x_K_F8 120.15 63.425 87072 65104 66479 76781 71409 101110 77325 88311 120020 84036 89660 94898 92283 79521 59031 115260 122240 81479 80312 59726 69405 76889 74260 100040 78935 90945 118520 85573 93500 95384 92624 84347 64396 113200 116070 77897 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107380000 17325 2873 16419 32885;32886 26345 26345 1 9606 Homo sapiens 0.06647083285952249 LRENVFQEHQTLK Unmodified 1640.8635 0.86345352 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;Q76MU0 CTTN;EMS1 Src substrate cortactin yes no 0 0 1 8 0 1 43.071 43.081 4 2.2312E-06 10692 20230619_1888_Aki_TMTPro18x_K_F8 142.38 90.837 70616 64474 73782 79026 84277 85437 87227 84466 74238 88738 71651 84567 84387 64275 74318 94698 95935 109910 65368 59126 74872 78702 86666 85911 87387 86478 76400 89267 74301 85312 85223 68653 77058 95442 91678 104180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176780000 17326 1413 16420 32887 26346 26346 1 9606 Homo sapiens 0.0686563355789076 LREQGTESR Unmodified 1074.5418 0.54178503 3578;668;675 A0A024RBE7;P42167;G5E972;P42167-3;H0YJH7;A0A024RBH7;P42167-2;Q59G12;P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 0 0 1 2.5 0.5 1 1 23.08 23.191 3 0.0037058 3791 20230619_1882_Aki_TMTPro18x_K_F3 82.008 48.142 122710 68686 161430 171120 225410 198650 180420 233940 172900 132590 211700 229170 161660 195920 194460 102250 219120 185590 113540 63772 161720 164600 227300 199480 184490 233710 177900 142310 213380 227000 168520 198020 197980 109300 209180 175510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133160000 17327 668;675;3578 16421 32888;32889 26347 26347 1 9606 Homo sapiens 0.007495813184277722 LREQVEER Unmodified 1057.5516 0.55162144 2138 A8K9K6;O00567;A0PJ92;A0A494C128;H0YDU4;H0Y653 NOP56 Nucleolar protein 56 yes no 0 0 1 2.5 1.12 1 1 1 1 30.771 30.825 3 0.00018534 6040 20230619_1881_Aki_TMTPro18x_K_F2 175.91 99.234 169140 103540 173910 184790 237330 228680 198180 209700 238330 205330 240900 249920 236320 204180 229410 147600 280130 241800 156190 95540 177230 180370 240230 227420 203370 215390 240570 209150 246910 249910 241060 209250 235700 154810 267270 228800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 299590000 17328 2138 16422 32890;32891;32892;32893 26348;26349 26348 2 9606 Homo sapiens 0.025147693238068314 LREQVVK Unmodified 870.5287 0.52870115 435 A0A024R7A8;P15121;Q59EL5;E9PCX2;E9PEF9 AKR1B1 Aldose reductase yes no 0 0 1 5.33 3.09 1 1 1 37.532 37.549 3 0.0029693 8468 20230619_1888_Aki_TMTPro18x_K_F8 122.74 64.138 1102100 723120 984990 1093300 1284000 1192200 1090300 1145500 1341000 1182000 1421100 1408500 1133100 1212800 1076300 1058600 1734600 1496800 1016900 665560 1015100 1074500 1303700 1197200 1118700 1174500 1354500 1199800 1441300 1412500 1165300 1248800 1131500 1091000 1651700 1417900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1017199999.9999999 17329 435 16423 32894;32895;32896 26350;26351;26352 26352 3 9606 Homo sapiens 0.08825794996994318 LRESEGLQEQK Unmodified 1315.6732 0.67319314 130 A0A024R169;Q9NXF1-2;Q9NXF1;B7Z9D5;B4DQR0 TEX10 Testis-expressed sequence 10 protein yes no 0 0 1 3.5 0.5 1 1 38.162 38.21 3 0.00037624 8859 20230619_1882_Aki_TMTPro18x_K_F3 104.59 70.707 126530 101730 131100 127180 162680 148760 151210 174520 186820 145400 179080 169340 160460 146470 157850 164480 193050 181630 117020 93356 133210 126690 165960 149440 154290 175620 187830 149260 183220 170150 164350 152760 162530 165950 184290 172380 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 53276000 17330 130 16424 32897;32898 26353;26354;26355 26353 3 9606 Homo sapiens 0.027983468956790603 LRESTPGDSPSTVNK Unmodified 1586.79 0.79001381 1744 B4DRB6;B4DH66;B4DZ54;A0A8C8MQ70;A0A8C8KGQ8;Q5T6F2;Q6UWR4;B7Z7P2 UBAP2;UNQ610 Ubiquitin-associated protein 2 yes no 0 0 1 5.5 0.5 1 1 37.927 38.011 3 4.0699E-14 8721 20230619_1886_Aki_TMTPro18x_K_F6 184.22 111.57 79096 64029 71755 74875 92414 89152 82122 79486 104960 87481 86848 83399 104230 74185 83921 102390 104610 88004 73077 58716 73811 74920 94035 88895 84085 82083 104910 87910 90676 84585 104790 78370 86929 101580 99778 83800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87550000 17331 1744 16425 32899;32900 26356;26357 26357 2 9606 Homo sapiens 0.020090403247422728 LRETQGIEK Unmodified 1072.5877 0.58767259 1594 O60716;H0YC95;O60716-3;O60716-2;Q68DU0;C9JZR2;A0A669KB05;O60716-5;O60716-11;O60716-10;O60716-9;O60716-17;Q96FS1;O60716-21;O60716-19;O60716-13;O60716-18;O60716-6;O60716-8;O60716-4;O60716-7;A0A669KB62;O60716-20;O60716-22;O60716-23;O60716-16;O60716-24;O60716-12;O60716-15;O60716-14;Q7KZJ3;O60716-26;A0A024R4Z0;O60716-25;O60716-27;O60716-29;O60716-31;A0A804HIL4;A0A804HK15;A0A024R4Y7;O60716-32;O60716-28;O60716-30;A0A804HJM1 CTNND1;DKFZp781O2021 Catenin delta-1 yes no 0 0 1 6 0 1 38.359 38.442 3 0.0012038 8883 20230619_1886_Aki_TMTPro18x_K_F6 94.66 51.388 143210 97036 110390 125630 156510 157490 138800 136060 199770 150830 170580 179090 163500 162240 135690 178670 211460 178530 132030 89141 115630 124900 158530 156370 142800 140880 198750 152650 176070 179950 166030 168650 142870 179160 201360 169700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110160000 17332 1594 16426 32901 26358 26358 1 9606 Homo sapiens 0.054282265006804664 LREVQAEIGK Unmodified 1141.6455 0.64552182 1116 O75150;O75150-4;A0A0S2Z537;A8K6K1;H3BP71;A0A0S2Z4Z2;B4DMM1;O75150-3 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 0 0 1 7 0 1 46.451 46.539 3 0.0026522 11978 20230619_1887_Aki_TMTPro18x_K_F7 85.845 26.64 77599 55570 61986 75597 86804 95859 87748 83674 128240 74297 96134 90164 97838 80618 77548 109800 117610 104860 71578 51064 64731 74921 88340 95092 89595 86086 126860 76207 100140 90608 98884 85009 81597 109490 112060 99696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85042000 17333 1116 16427 32902 26359 26359 1 9606 Homo sapiens 0.08036488426091637 LREVVETPLLHPER Unmodified 1686.9417 0.94170385 1235 C9JX88;A0A140VK70;P35998;Q75L23;P35998-2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 1 6.5 0.5 1 1 47.169 47.254 4 3.2192E-22 12653 20230619_1886_Aki_TMTPro18x_K_F6 206.06 171.76 140240 107380 107820 126200 140690 148070 147170 135290 160900 141800 148830 134230 147490 121680 142430 151400 141220 138020 129370 98497 112830 126180 143730 147810 148360 139290 162620 142780 153130 136270 150300 127510 144900 150900 135110 131240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 661850000 17334 1235 16428 32903;32904 26360;26361 26360 2 9606 Homo sapiens 0.12571066143118514 LREYEAALNSK Unmodified 1292.6725 0.67246486 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 LMNB1 Lamin-B1 yes no 0 0 1 7 0.707 1 2 1 48.363 48.443 3;4 5.5734E-05 12840 20230619_1888_Aki_TMTPro18x_K_F8 133.98 99.443 1724100 1404100 1933300 1655000 1832600 1905000 1573000 1490200 1630400 2042800 2179200 2009500 2130500 1762000 1924600 2390400 2344600 3294800 1595800 1287700 1942700 1654700 1903000 1898700 1604700 1566200 1681800 2033500 2206700 2034200 2165900 1861100 1986800 2440400 2245800 3116400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1650399999.9999998 17335 3482 16429 32905;32906;32907;32908 26362;26363;26364 26364 3 9606 Homo sapiens 0.03783552246613908 LRFEQER Unmodified 976.50903 0.50902834 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;B3KSQ7 DBN1 Drebrin yes no 0 0 1 5 0.816 1 1 1 35.474 35.537 3 0.034819 7824 20230619_1886_Aki_TMTPro18x_K_F6 76.774 46.27 227830 216860 209770 199480 235280 244730 219890 221840 249450 221600 254190 226870 243430 215830 221290 230320 278760 191060 210750 198350 214870 203680 241920 243720 223600 228180 252570 224220 259910 229820 247850 223650 228600 229070 265550 182210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 425530000 17336 1396 16430 32909;32910;32911 26365 26365 1 9606 Homo sapiens 0.01983418986230845 LRFPAEDEFPDLSAHNNHMAK Unmodified 2438.1437 0.14372748 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;G3V4N7 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 1 7 0.816 1 1 1 51.51 51.586 5 2.6929999999999998E-22 14319 20230619_1887_Aki_TMTPro18x_K_F7 176.1 164.48 438880 408320 474480 435560 281340 317840 385730 383820 402770 474190 476370 514650 529000 457830 481460 562070 547540 660520 406440 373940 475830 436530 310230 332110 383870 390210 412590 475400 487900 518650 536060 479790 494550 568360 524020 625910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2184900000 17337 3441 16431 32912;32913;32914 26366;26367 26366 2 9606 Homo sapiens -0.017818630242345534 LRGEINK Unmodified 828.48175 0.48175096 1442 B5BUB1;A0A384MTR5;Q9Y265;Q9Y265-2;E7ETR0;B3KRS7;H7C4G5;J3QLR1;H7C4I3 RUVBL1 RuvB-like 1 yes no 0 0 1 8 0 1 37.153 37.138 3 0.0079372 8328 20230619_1888_Aki_TMTPro18x_K_F8 104.21 28.174 171240 81509 188450 212350 253050 257260 191220 263180 234990 151260 262590 321160 243130 229850 232550 109660 330000 288570 158060 75819 191060 204010 255930 256610 198000 265340 237630 164040 267660 314870 248480 233790 241290 122590 314510 272350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77400000 17338 1442 16432 32915 26368 26368 1 9606 Homo sapiens 0.06064935445840547 LRGPNPK Unmodified 780.46062 0.46062159 2929 E9PKP7;P17480-2;P17480;A8K962;B4DNQ1;O00164;B4DLB0 UBTF Nucleolar transcription factor 1 yes no 0 0 1 3.5 0.5 1 1 33.92 33.979 3 0.04255 7113 20230619_1883_Aki_TMTPro18x_K_F4 68.7 16.913 155000 68271 186010 221740 324210 369900 249080 298510 307680 169360 279190 290410 210190 205370 262930 95472 267740 259950 143150 63866 188700 212800 323910 360710 257340 306240 308400 181980 284930 286240 219380 208880 265740 107490 256080 245190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85448000 17339 2929 16433 32916;32917 26369 26369 1 9606 Homo sapiens 0.06160970136988908 LRGPSGGGEEPALSQYQR Unmodified 1900.9391 0.93913766 1845 Q99567;J3KMX1;A0A8V8TPS0;A0A8V8TPT0;A0A8V8TQB1;A0A8V8TQZ0;A0A8V8TQC3;A0A8V8TRA5;A0A8V8TPT4;A0A8V8TQD5;B7Z5I6;A0A8V8TQZ7;A0A8V8TQC7;A0A8V8TPS5;A0A8V8TQB7;A0A8V8TQD1;A0A8V8TR00;A0A8V8TQZ4 NUP88 Nuclear pore complex protein Nup88 yes no 0 0 1 6.5 0.5 1 1 41.238 41.32 3 4.6925E-30 9784 20230619_1887_Aki_TMTPro18x_K_F7 219.96 203.29 74733 42308 75042 71086 76254 90900 70352 80876 86233 72323 91157 88782 87592 76540 86138 74641 104510 89675 68973 39022 76194 69650 79032 90116 71835 83054 87088 74077 93126 88979 89469 79259 88556 75928 99713 85068 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129090000 17340 1845 16434 32918;32919 26370 26370 1 9606 Homo sapiens 0.024705659475557695 LRHEILLSQSVR Unmodified 1449.8416 0.84159587 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 1 3.5 0.5 1 1 39.589 39.637 4 4.9506E-05 9390 20230619_1883_Aki_TMTPro18x_K_F4 104.24 80.925 69735 45458 64497 65816 78196 77495 74068 75030 91421 51591 58991 57229 53198 45057 58822 49399 51888 55460 64360 41820 66155 64933 79996 77414 75438 76194 90729 53634 61801 57447 54749 47115 59282 49946 49738 52599 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69390000 17341 3654 16435 32920;32921 26371;26372 26371 2 9606 Homo sapiens 0.13466873599986684 LRIDPINER Unmodified 1124.6302 0.63020611 2837 D3VVF5;D3VVI9;D3VVG9;D3VVN1;D3VVJ1;D3VVL1;D3VVB2;D3VVI8;D3VVG8;D3VVB3;D3VVQ2;D3VVJ3;D3VVG7;D3VVE5;D3VVD6;D3VVN0;D3VVJ4;D3VVK7;D3VVT4;D3VVT6;D3VVI2;D3VVD7;D3VVT5;D3VVR6;D3VVE3;D3VVL5;D3VVD3;D3VVJ2;D3VVJ9;D3VVS1;D3VVB4;D3VVR9;D3VVP2;D3VVQ9;D3VVA7;D3VVA9;D3VVH8;D3VVP0;D3VVR2;D3VVH7;D3VVE2;D3VVS9;D3VVH2;D3VVS8;D3VVD8;D3VVC6;D3VVG6;D3VVA8;D3VVB9;Q4VBR4;D3VVN2;D3VVT0;D3VVL4;D3VVE9;D3VVM4;D3VVN5;D3VVH4;A0A2R8Y3X7;D3VVG4;D3VVG0;G3V3T0;D3VVL7;D3VVJ7;D3VVD1;F5H211;D3VVF9;D3VVK2;D3VVK0;D3VVD2;D3VVF6;D3VVI5;D3VVP6;D3VVF4;D3VVP7;D3VVB5;D3VVL8;D3VVL6;D3VVS0;D3VVH6;D3VVD0;D3VVK1;D3VVD9;D3VVF7;D3VVJ6;D3VVC0;D3VVS3;D3VVB6;D3VVL3;D3VVN6;D3VVT1;D3VVG1;D3VVF3;D3VVN8;G3V4F5;D3VVJ0;G3V4F4;G3V328;G3V5H3;S4R399;D3VVK4;D3VVM2;D3VVD4;D3VVN9;D3VVC7;D3VVT2;D3VVC2;D3VVK3;D3VVM3;D3VVM7;D3VVK8;D3VVK5;D3VVS7;G3V3R7;D3VVF0;D3VVI3;D3VVL0;D3VVN7;D3VVC4;C9JQV6;D3VVL9;P54252;P54252-1;P54252-3;D3VVN4;D3VVE6;D3VVM5;D3VVG2;D3VVE0;D3VVE1;D3VVE4;D3VVH9;D3VVH1;D3VVH5;P54252-4 ATXN3 Ataxin-3 yes no 0 0 1 7 0 1 42.691 42.766 3 0.005526 10410 20230619_1887_Aki_TMTPro18x_K_F7 77.14 45.85 39946 35008 35721 38930 36137 43685 39268 41237 49835 37391 39158 34497 41546 32854 44854 44897 44759 43935 36921 32080 36667 39064 37644 43757 39740 42188 49709 37935 40764 35140 42474 34597 45546 44868 42820 41743 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20305000 17342 2837 16436 32922 26373 26373 1 9606 Homo sapiens 0.07287621628870511 LRIEECAAR Unmodified 1116.571 0.57097667 752 A0A0S2Z4X4;T1WHH0;A0A2S1PH13;A0A2S1PH16;B2R6K1;A0A2S1PH34;A0A2S1PH23;A0A2S1PH20;A0A2S1PH09;A0A024RD82;P22033;A0A2S1PH31 MUT Methylmalonyl-CoA mutase, mitochondrial yes no 0 0 1 5.5 0.5 1 1 36.341 36.417 3 0.059161 8051 20230619_1885_Aki_TMTPro18x_K_F5 57.55 24.191 88141 63600 79156 85711 96538 109230 96795 103550 125970 92880 97478 109400 99633 92456 96757 102360 133870 101710 81373 58435 81465 85031 98997 108500 98467 105860 125450 95004 101530 109710 101600 96400 100500 102670 127500 96734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61597000 17343 752 16437 32923;32924 26374 26374 1 9606 Homo sapiens 0.017354023430243615 LRLDSIVIQQGR Unmodified 1396.815 0.81504677 2629;940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370;D7EZH4;B7ZAX9;B4DZC0;O60264 SMARCA1;SMARCA5 Probable global transcription activator SNF2L1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 no no 0 0 1 4.5 0.5 1 1 50.942 50.996 3 0.00016762 14433 20230619_1883_Aki_TMTPro18x_K_F4 108.01 88.493 218650 194250 204790 222710 205440 234280 231080 224450 255080 178600 178100 156290 191480 153130 205090 214090 192860 173990 202180 178040 209310 222770 214130 235820 232220 228810 255220 182440 186880 159800 195620 161300 207680 211900 184520 165750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 924500000 17344 940;2629 16438 32925;32926 26375;26376 26375 2 9606 Homo sapiens 0.13251184708633446 LRLEEDKPAVER Unmodified 1453.7889 0.7888916 2289 B2RAX6;Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 0 0 2 4.5 0.5 1 1 41.245 41.309 4 0.0019153 10137 20230619_1883_Aki_TMTPro18x_K_F4 87.447 67.066 242040 195260 238530 227470 228850 259850 260730 242950 264210 290710 281040 256170 328900 248580 260840 321870 283920 255780 223760 179060 242400 227580 239340 259950 261200 250650 269860 290180 289440 261520 330700 260620 268040 318430 271240 243740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 705090000 17345 2289 16439 32927;32928 26377;26378 26377 2 9606 Homo sapiens 0.08014870746501401 LRLELLDK Unmodified 998.61243 0.61243078 4780 yes no 0 0 1 1 0 1 52.414 52.414 3 0.01253 15370 20230619_1880_Aki_TMTPro18x_K_F1 77.662 0 + 54176 46485 53645 55843 53157 65237 67328 67614 67908 65882 68605 72055 77351 62225 76640 86473 83807 83389 50106 42630 54563 55764 55668 65291 67084 68854 69178 66853 70786 72574 78620 65802 78394 86302 80113 79238 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39883000 17346 4780 16440 32929 26379 26379 1 9606 Homo sapiens 0.11306906374045411 LRLENCEDR Unmodified 1203.5666 0.56661958 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A494C1D7;Q03001-9;B4DSS9;Q03001-3;Q6P0N6 DST Dystonin yes no 0 0 1 3 0 1 35.315 35.372 3 0.020878 7719 20230619_1882_Aki_TMTPro18x_K_F3 72.275 38.389 62016 40555 55588 62700 69795 69231 60710 65534 71252 60422 77879 69300 69439 54120 69694 70660 77448 70041 57223 37338 57242 61551 71098 69417 62093 67065 72206 61617 79166 69497 71118 57215 71296 70706 73975 66559 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48726000 17347 1693 16441 32930 26380 26380 1 9606 Homo sapiens -0.027021068705153084 LRLESEGSPETLTNLR Unmodified 1813.9534 0.95339074 3075 H3BS72;Q9P035;H3BPZ1;Q9P035-2;H3BRL8;H3BMZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 0 0 1 5.5 0.5 1 1 49.469 49.546 3 1.5397E-42 13542 20230619_1885_Aki_TMTPro18x_K_F5 276.67 221.27 313150 263110 309530 332240 333650 358340 380450 389040 411140 343680 351340 374950 435640 375060 407840 385850 415560 466190 289580 241430 315260 330230 345810 361060 381820 394080 414640 350830 367240 379240 440670 387580 415510 392150 397880 441760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 947480000 17348 3075 16442 32931;32932 26381;26382 26381 2 9606 Homo sapiens 0.07897218375819648 LRLESEGSPETLTNLRK Unmodified 1942.0484 0.048353761 3075 H3BS72;Q9P035;H3BPZ1;Q9P035-2;H3BRL8;H3BMZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 0 0 2 8 0 1 47.863 47.921 4 2.7366E-06 12603 20230619_1888_Aki_TMTPro18x_K_F8 112.55 94.686 65919 56762 66308 63180 68274 67797 71836 74396 88937 65443 66076 65625 75768 66384 73491 93122 83134 88370 60977 52017 67326 63384 70818 68393 72755 75295 88671 66671 69304 66721 76956 69855 75414 92816 79485 83965 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101860000 17349 3075 16443 32933 26383 26383 1 9606 Homo sapiens 0.11501151847005531 LRNEYGPVLHMPTSK Unmodified 1740.8981 0.89812447 3260 O43660-2;O43660;D6RA26;B7Z982 PLRG1 Pleiotropic regulator 1 yes no 0 0 1 3 0 1 46.662 46.74 4 0.066595 12664 20230619_1882_Aki_TMTPro18x_K_F3 49.343 28.113 152350 136960 132670 143120 151060 191480 185610 165560 197350 161620 163560 148220 170760 130870 168980 177600 175850 172800 140810 125420 136820 144710 156600 189350 185390 170830 198930 163240 169650 150600 173890 138120 172290 177420 168160 164190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93829000 17350 3260 16444 32934 26384 26384 1 9606 Homo sapiens 0.05731133374320052 LRPEREPR Unmodified 1051.5887 0.58867565 2263 B2R8R5;Q13263;Q13263-2 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 2 6.5 0.5 1 1 23.024 23.123 3 0.0038586 3848 20230619_1886_Aki_TMTPro18x_K_F6 95.099 31.613 114920 77475 107350 114630 154560 122320 132110 157490 161010 138450 151290 125320 131550 137450 121210 118130 141440 111000 106090 71281 110370 112820 155880 123990 135440 157830 161960 140560 154620 128300 134590 140250 124520 118680 134920 105610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62110000 17351 2263 16445 32935;32936 26385;26386 26385 2 9606 Homo sapiens 0.06494485660209648 LRPESALAQAQK Unmodified 1310.7306 0.73064844 2627 B4DZ87;O94826;B3KQK0;B3KQK5 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 1 2 0 1 42.618 42.698 3 2.9265E-05 11047 20230619_1881_Aki_TMTPro18x_K_F2 122.46 49.393 389290 305350 367130 400170 444690 501240 460560 451330 554250 263770 285560 277810 270650 236690 347390 296810 314700 253600 359700 280370 376200 397560 456430 497880 466070 459540 547670 277620 305130 280270 280520 248570 349790 295090 301000 241550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 467910000 17352 2627 16446 32937 26387 26387 1 9606 Homo sapiens 0.08771233891866359 LRPEVLQDLR Unmodified 1237.7143 0.71427009 3561 Q6FGY1;P37235;Q68CP5;E9PC71;C9JW46 HPCAL1;DKFZp781K1922 Hippocalcin-like protein 1 yes no 0 0 1 7.5 0.5 1 1 48.293 48.37 3 6.8331E-05 12844 20230619_1888_Aki_TMTPro18x_K_F8 138.99 88.708 164060 133350 164170 206140 137540 166140 200730 217780 243190 227280 233450 248250 203120 203590 238850 268250 279690 251860 151700 122660 166660 201590 146810 172090 200070 219180 244830 229760 238830 249580 210260 214710 244660 267540 267020 239490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 263270000 17353 3561 16447 32938;32939 26388 26388 1 9606 Homo sapiens 0.10492152725782944 LRPGFMEDR Unmodified 1119.5495 0.54951295 4029 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 1 7.5 0.5 1 1 41.458 41.492 3 0.015946 9851 20230619_1887_Aki_TMTPro18x_K_F7 68.626 34.453 188070 118480 171540 159090 198250 232280 209380 209390 318370 132660 123550 110970 129720 104900 134330 150740 128150 115910 173530 108920 175990 158290 204460 228690 213640 213360 309810 137940 136120 113610 132480 110820 136260 148760 122590 110510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94228000 17354 4029 16448 32940;32941 26389 26389 1 9606 Homo sapiens -0.00547982685657189 LRPIAVIK Unmodified 908.61712 0.61712223 4728 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 1 6 0 1 47.414 47.494 3 0.0014242 12799 20230619_1886_Aki_TMTPro18x_K_F6 108.46 41.429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17355 4728 16449 32942 26390 26390 1 9606 Homo sapiens 0.15915835307453108 LRPLYDIPYMFEAR Oxidation (M) 1798.9076 0.90762652 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 1 1 2 0 1 59.413 59.425 3 0.042582 18402 20230619_1881_Aki_TMTPro18x_K_F2 53.565 41.399 31397 30948 31946 42449 32225 38477 35144 36264 42384 44171 41787 43779 47992 41059 37365 61168 50310 48141 29073 28408 32477 41845 33558 39147 35498 37425 42773 44207 43175 44399 48298 43484 39030 60343 47997 45871 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25994000 17356 1229 16450 32943 26391 26391 769 1 9606 Homo sapiens 0.04012901659848467 LRPLYDIPYMFEAR Unmodified 1782.9127 0.9127119 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 1 3.5 0.5 1 1 62.429 62.447 3 1.0432E-05 19384 20230619_1883_Aki_TMTPro18x_K_F4 118.47 99.147 88624 79808 101890 108060 74244 102850 104490 92072 114740 123660 105330 127280 134090 104980 112240 144380 118980 154330 82101 73269 102060 106710 80242 104090 103930 95724 116030 123390 109920 128220 134850 111170 115080 144900 114020 146350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92170000 17357 1229 16450 32944;32945 26392;26393 26393 2 9606 Homo sapiens 0.05257205522480035 LRPLYNHPAGPR Unmodified 1389.763 0.76295162 550 Q5R3B4;B2R4Q7;A0A024R8Z5;O95563 MPC2;BRP44 Mitochondrial pyruvate carrier 2 yes no 0 0 1 6.67 0.471 1 2 34.187 34.257 3;4 7.7395E-05 7359 20230619_1886_Aki_TMTPro18x_K_F6 100.55 82.888 62026 57817 63392 63679 93354 115900 79596 81804 121550 29297 41348 48665 43190 42294 44090 24988 45314 43743 57414 52964 64754 64498 94408 112410 82269 84497 117950 33231 46327 48301 44141 42911 44774 26513 43333 41355 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88755000 17358 550 16451 32946;32947;32948 26394;26395 26394 2 9606 Homo sapiens 0.08366066085523016 LRPQTYDLQESNVQLK Unmodified 1931.0112 0.011239973 886 A0A087X142;B7ZVZ1;A6NMH6;A6NFQ9;F8W8I8;Q92599-3;Q92599-2;Q92599-4;Q92599;C9JV02;A0A0A0MRP8;C9J4G8 SEPT8 Septin-8 yes no 0 0 1 8 0 1 49.886 49.959 3 1.2471E-11 13504 20230619_1888_Aki_TMTPro18x_K_F8 166.46 133.91 62612 46988 60040 55507 56239 69628 64537 73636 73449 71163 74315 75614 77156 70649 77772 82676 77055 81424 57846 43107 61130 55574 59012 69407 64906 74834 74357 72181 76356 76414 78716 73650 79063 82811 73762 77334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107300000 17359 886 16452 32949 26396 26396 1 9606 Homo sapiens 0.08297480301234827 LRPVNQNK Unmodified 967.55631 0.55631289 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;P51114-3;B4DM21;B4DM78;B4DGH9;E7EU85;C9JAJ4;C9JY20;C9JZE0;C9J5B4;C9IZ22 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 1 4 0 1 33.729 33.783 3 0.0001196 7050 20230619_1883_Aki_TMTPro18x_K_F4 166.86 127.9 156330 70609 218180 214120 295240 287090 221420 279180 231360 150520 237260 264250 199500 178840 259700 77929 253010 210630 144620 65928 217550 205130 298100 284330 228070 282160 235060 162470 241820 259940 207690 182030 261590 87996 241850 198810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105350000 17360 1029 16453 32950 26397 26397 1 9606 Homo sapiens 0.07123698257225897 LRQDFEEVTTQNEK Unmodified 1735.8377 0.83769228 4076 Q5VTR2;Q05DC0;A0PJJ6 RNF20 E3 ubiquitin-protein ligase BRE1A yes no 0 0 1 3 0 1 48.001 48.08 3 2.3953E-07 13294 20230619_1882_Aki_TMTPro18x_K_F3 142.32 111.45 53384 44571 51371 59941 53302 63110 58128 50170 69422 73015 79886 70408 84905 64650 63702 81311 82565 82096 49353 40927 52439 59280 55394 63269 58673 52795 70519 72508 81595 71439 85443 67804 66287 81431 78812 77969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89456000 17361 4076 16454 32951 26398 26398 1 9606 Homo sapiens -0.0007930547506020957 LRQDLQDR Unmodified 1042.552 0.55195579 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 4.5 0.5 2 2 33.18 33.25 2;3 0.0039349 6834 20230619_1883_Aki_TMTPro18x_K_F4 137.84 75.297 77285 60485 82188 80887 99420 97990 89939 97161 114980 85851 99218 88175 94377 79765 93039 79124 108210 97723 71481 55549 83315 80239 101580 97782 92024 98978 115000 87495 102250 89155 96428 82563 95383 80615 103320 92659 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 229910000 17362 3440 16455 32952;32953;32954;32955 26399;26400 26399 2 9606 Homo sapiens 0.03238189043645434 LRQEFAQHANAFHQWIQETR Unmodified 2509.2363 0.23632274 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q14917;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 4 0 1 51.785 51.812 5 2.3586E-36 14813 20230619_1883_Aki_TMTPro18x_K_F4 173.36 158.43 39509 40316 36942 47254 34516 42260 37465 38355 43114 39423 41320 41386 50671 42666 41145 53708 54139 61505 36570 36942 37767 47076 36169 43024 37794 39506 43534 39863 42884 42003 50979 44572 42795 54184 51725 58308 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74694000 17363 1022;3868 16456 32956 26401 26401 1 9606 Homo sapiens 0.04207402824158635 LRQELGICPAVK Unmodified 1382.7704 0.77040476 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 1 2.5 0.5 1 1 48.199 48.274 3 0.00034159 13625 20230619_1881_Aki_TMTPro18x_K_F2 96.533 57.515 360170 278110 318650 336770 342790 397750 347430 389910 455670 456370 475260 543420 594300 529260 386120 694770 676010 693430 332600 255170 327620 336130 354730 397360 353550 400500 459080 460390 492080 547470 593380 555000 414000 694450 644120 658570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 409850000 17364 2980 16457 32957;32958 26402;26403 26402 2 9606 Homo sapiens 0.09433037570920533 LRQENIELGEK Unmodified 1327.7096 0.70957864 4599 Q9NUQ3;Q9NUQ3-2 TXLNG Gamma-taxilin yes no 0 0 1 4.5 0.5 1 1 44.129 44.191 3 9.1424E-05 11299 20230619_1885_Aki_TMTPro18x_K_F5 125.89 86.27 131390 102180 117600 125530 135770 152560 136010 129920 155390 160700 167470 150110 189160 134660 147270 184000 184820 165270 121350 93759 120930 125200 139670 151700 137720 135110 157770 160460 172040 152450 190230 142130 152760 182950 176330 157250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109310000 17365 4599 16458 32959;32960 26404 26404 1 9606 Homo sapiens 0.0588322379235251 LRQENMELAER Oxidation (M) 1403.6827 0.68271197 3569 P40222 TXLNA Alpha-taxilin yes yes 0 1 1 2.5 0.5 1 1 33.451 33.513 3 0.00024944 7059 20230619_1881_Aki_TMTPro18x_K_F2 115.92 94.145 61546 49159 56301 54682 62842 70895 66809 67654 85214 68202 74318 70766 71402 55491 64052 82381 76251 73835 56862 45062 57723 55008 64916 70391 67692 69332 85276 69004 76599 71257 72600 59175 66038 81816 72822 70228 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108210000 17366 3569 16459 32961;32962 26405;26406 26405 2243 2 9606 Homo sapiens -0.0029820809045304486 LRQPFFQK Unmodified 1062.5974 0.59744942 1789 A0A8J8YYJ1;Q01105-3;A0A8I5KS71;B2RCX0;A0A024R895;Q5VXV3;A0A0C4DFV9;Q01105-4;Q01105-2;Q01105;P0DME0 SET;SETSIP Protein SET;Protein SETSIP yes no 0 0 1 6.5 0.5 1 1 47.498 47.583 3 0.0011184 12448 20230619_1887_Aki_TMTPro18x_K_F7 120.92 66.954 1393600 1387100 1166300 1173900 1741400 2096900 1681500 1593800 2210700 266400 210710 244710 331030 276130 427420 355260 329320 256590 1288600 1267800 1212900 1216000 1764600 2038900 1712800 1627200 2136400 344010 316210 251790 339610 287880 427070 350500 315540 245020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1980299999.9999998 17367 1789 16460 32963;32964 26407;26408 26408 2 9606 Homo sapiens 0.06865459296705012 LRQPPSISAEVEK Unmodified 1452.7936 0.79364262 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A0U1RQJ2;Q9HDA7 DST;CATX-15 Dystonin yes no 0 0 1 8 0 1 45.371 45.399 3 0.0063492 11644 20230619_1888_Aki_TMTPro18x_K_F8 73.887 19.279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17368 1693 16461 32965 26409 26409 1 9606 Homo sapiens 0.08535754889248892 LRSDAGLESDTAMK Oxidation (M) 1508.7141 0.71407167 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q3SWU7 DDX21 Nucleolar RNA helicase 2 yes no 0 1 1 3.5 0.5 1 1 40.579 40.629 3 7.9794E-07 9789 20230619_1883_Aki_TMTPro18x_K_F4 136.33 100.59 270580 227050 226360 246130 299000 283520 283050 285990 290880 336260 318440 282990 355400 256160 279730 405540 325500 296830 249900 208040 234780 247580 304110 284140 286580 293240 297370 335400 326740 289100 357660 273110 289000 398660 310800 283180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 373690000 17369 1748 16462 32966;32967 26410 26410 1144 1 9606 Homo sapiens -0.019936798470553185 LRSDAGLESDTAMK Unmodified 1492.7192 0.71915705 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q3SWU7 DDX21 Nucleolar RNA helicase 2 yes no 0 0 1 4.5 0.5 1 1 43.955 44.017 3 0.016003 11254 20230619_1885_Aki_TMTPro18x_K_F5 64.244 47.471 45546 35827 48632 49723 48503 61029 53432 54268 60937 53684 63503 62152 60296 59700 60418 56649 64367 58852 42128 32916 49161 49208 50579 60664 53836 55890 61719 54569 64892 62634 61703 61460 61629 57128 61510 55895 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 410250000 17370 1748 16462 32968;32969 26411 26411 1 9606 Homo sapiens -0.007493759844237502 LRSEIDNVK Unmodified 1072.5877 0.58767259 2778;2803 H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2;H6VRF9;CON__Q922U2;CON__Q5XQN5 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 1 6.5 0.5 1 1 41.975 42.058 3 0.00039181 10360 20230619_1886_Aki_TMTPro18x_K_F6 108.7 45.414 + 51416 48818 52026 88968 1114900 106310 353220 98775 279600 45547 53453 38839 66020 473830 83125 38570 55389 77993 47595 44981 67576 86633 1044300 109120 396610 100760 280500 49875 66151 54480 70709 449590 82450 48460 53420 73577 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108600000 17371 2778;2803 16463 32970;32971 26412 26412 1 9606 Homo sapiens 0.05428226500657729 LRSEMIEAIR Unmodified 1216.6598 0.65979168 3932 Q15397;B2RDG4 KIAA0020 Pumilio domain-containing protein KIAA0020 yes no 0 0 1 7.5 0.5 1 1 45.859 45.922 3 4.5943E-05 11865 20230619_1888_Aki_TMTPro18x_K_F8 123.67 87.791 73138 66245 63949 69672 62146 78431 71992 66269 78683 80382 73952 77346 87391 73149 73044 99333 85454 82263 67603 60666 65745 70214 65061 78375 72220 68940 79639 80406 76706 78538 88092 76960 75359 98369 81620 78327 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117730000 17372 3932 16464 32972;32973 26413 26413 1 9606 Homo sapiens 0.06012817582700336 LRVDFADTEHR Unmodified 1357.6739 0.67386184 840 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 RBM15 Putative RNA-binding protein 15 yes no 0 0 1 4.5 0.5 1 1 40.432 40.497 4 0.00022155 9768 20230619_1883_Aki_TMTPro18x_K_F4 120.57 103.25 41894 35439 36270 42669 40434 46798 44157 45677 52738 44183 52427 49474 50880 43462 43167 53334 57784 53278 38703 32502 37418 42548 41811 46979 44573 46701 53189 44909 53707 49815 51628 45548 44892 53404 55114 50621 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51288000 17373 840 16465 32974;32975 26414 26414 1 9606 Homo sapiens 0.009331863353509107 LRVDPVNFK Unmodified 1086.6186 0.61857879 2774 CON__P01966;G3V1N2;I1VZV6;A0A385HW21;A0A385HW02;A0A385HVZ2;A0A385HVY8;A0A385HW63;A0A2R8Y7C0;E9M4D4;Q4ZGM8;U6A216;A0A1K0GXZ1;Q96T46;A0A1S5UZ39;P69905;D1MGQ2;E1B2D1;Q86YQ1;Q9NQT3;V9H1D9;Q6J1Z9;E9LUX2;Q86YL2;Q86YQ4;P78461 HBA2;HBA1 Hemoglobin subunit alpha yes no 0 0 1 3 0.816 1 1 1 49.837 49.893 3 0.00036019 14057 20230619_1882_Aki_TMTPro18x_K_F3 120.45 0 + 405230 860470 1025400 673440 2336200 2468200 1818000 1834300 2045500 3632000 6349300 7873500 2679900 3873000 7100200 2794500 3851400 5306400 383180 784730 1008100 719860 2306400 2346100 1872100 1964900 2240300 3697100 6168000 7652300 3066300 4061900 6940000 2981000 3726500 5008100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4964400000 17374 2774 16466 32976;32977;32978 26415 26415 1 9606 Homo sapiens 0.07873424605554646 LRVEFPR Unmodified 915.52904 0.5290355 3140;3844 J3KTL2;Q07955;Q59FA2;Q07955-3;Q07955-2;A8K1L8;Q13242;A8K3M9;S4R3G0;B4DFT9 SRSF1;SRSF9 Serine/arginine-rich splicing factor 1;Serine/arginine-rich splicing factor 9 no no 0 0 1 3 0.816 1 1 1 44.083 44.148 3 0.0063205 11426 20230619_1882_Aki_TMTPro18x_K_F3 109.86 55.313 1672800 1502900 1528100 1586700 1761400 1980300 1705000 1799300 1967900 1022800 1022000 785330 918650 741320 1379100 1095800 1042400 673910 1546600 1376400 1568200 1601300 1810500 1968700 1730400 1829400 1949500 1069800 1088100 808530 962700 784590 1374000 1073000 998090 645910 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1006499999.9999999 17375 3140;3844 16467 32979;32980;32981 26416;26417;26418;26419;26420 26417 5 9606 Homo sapiens 0.06789214716843617 LRVELAEK Unmodified 956.56548 0.56548059 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 1 8 0 1 45.166 45.195 3 0.071225 11569 20230619_1888_Aki_TMTPro18x_K_F8 51.762 11.825 51236 43870 53382 51436 57484 56888 55471 62038 65792 58718 68137 64024 61246 57266 59323 66414 75797 69606 47407 40223 54087 51423 59284 57252 56400 62909 66506 59683 69467 64562 62689 59757 61304 66754 72320 66101 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18904000 17376 3549 16468 32982 26421 26421 1 9606 Homo sapiens 0.08546046822880271 LRYEIDTGEETK Unmodified 1452.7096 0.70963822 3817 Q0VDF9;H7C2A1;B4DYI5 HSPA14 Heat shock 70 kDa protein 14 yes no 0 0 1 3 0 1 45.278 45.354 3 1.1761E-06 12010 20230619_1882_Aki_TMTPro18x_K_F3 145.43 94.141 176120 132490 167900 176170 195340 210850 190400 190540 213730 233480 246210 225130 251180 194930 211700 281760 270130 259510 162710 121690 171690 174740 200590 210110 193040 197170 217840 233380 251120 228090 254240 206730 219580 280270 257820 246760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68592000 17377 3817 16469 32983 26422 26422 1 9606 Homo sapiens 0.001391790016896266 LSAAEDPLVQSLR Unmodified 1397.7514 0.75144346 1440 B2R694;A0A384MTQ5;P48449-3;P48449;A0A0G2JQD0;P48449-2;C9J315;A0A0G2JS81 LSS Terpene cyclase/mutase family member;Lanosterol synthase yes no 0 0 0 5 0 1 57.002 57.064 2 6.7874E-05 16706 20230619_1885_Aki_TMTPro18x_K_F5 140.09 118.13 52296 41477 46158 51802 41347 43596 52086 49306 49536 64669 66775 61558 67761 58173 60557 76711 64827 75584 48300 38064 47360 51365 43597 44853 51836 50406 51352 64404 67709 62558 68779 61102 62037 76674 62059 71763 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290780000 17378 1440 16470 32984 26423 26423 1 9606 Homo sapiens 0.068477794808814 LSAASTWLEDEGVGATTVMLK Unmodified 2178.0878 0.087835314 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;B7Z602 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 7 0 1 64.588 64.617 4 2.6197E-08 19924 20230619_1887_Aki_TMTPro18x_K_F7 116.09 99.596 12530 11275 12167 12743 11604 16260 14705 14317 16721 18631 16679 17348 19218 14829 14685 20428 17065 21979 11591 10332 12391 12797 12210 16124 14709 14872 16934 18557 17226 17582 19309 15688 15178 20505 16338 20841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107980000 17379 874 16471 32985 26424 26424 1 9606 Homo sapiens 0.04591491015526117 LSAAVTEAFVR Unmodified 1162.6346 0.63462279 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;P26640-2 VARS Valine--tRNA ligase yes no 0 0 0 4.5 3.5 1 1 58.057 58.08 2;3 4.5315E-09 17696 20230619_1880_Aki_TMTPro18x_K_F1 176.95 153.57 155780 118610 140500 150790 131620 171070 149800 142510 169250 168550 168160 168190 175510 151530 168630 180310 169620 167790 143870 108890 143950 149870 138170 170720 150610 148300 171320 168970 172920 170190 178570 158350 171720 180020 162270 159510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137540000 17380 725 16472 32986;32987 26425;26426 26425 2 9606 Homo sapiens 0.05981086051792772 LSADNMDPDFVER Unmodified 1507.6613 0.66130782 3348 O95219;F8W9T3 SNX4 Sorting nexin-4 yes no 0 0 0 2 0 1 53.874 53.902 3 0.0012634 16126 20230619_1881_Aki_TMTPro18x_K_F2 81.904 68.703 28864 23802 31315 36415 33137 35621 34522 33974 38162 30849 32554 38026 32250 27632 35566 35540 31191 33188 26710 21890 31664 35706 34299 36031 34842 34757 38430 31568 33702 37913 33081 29251 35867 35460 29899 31539 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19354000 17381 3348 16473 32988 26427 26427 1 9606 Homo sapiens -0.07221637909856327 LSAEAAEK Unmodified 817.41815 0.41814765 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 3 0 1 41.31 41.369 2 0.074343 10180 20230619_1882_Aki_TMTPro18x_K_F3 68.625 17.279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17382 2188 16474 32989 26428 26428 1 9606 Homo sapiens 0.0021353021809318307 LSAEERDQLLPNLR Unmodified 1652.8846 0.8845829 3697 Q6LEE2;Q6FGB3;P61457 PCBD;PCBD1 Pterin-4-alpha-carbinolamine dehydratase yes no 0 0 1 5.5 0.5 1 1 50.651 50.727 3 0.0058664 14180 20230619_1886_Aki_TMTPro18x_K_F6 70.373 47.494 50197 48638 48357 54805 46590 47018 54167 59075 56135 51744 60460 55549 59207 49620 66207 62222 54996 59168 46455 44559 49283 54765 48696 48438 54266 59322 57222 52787 61767 56070 60776 52043 66563 62171 52757 56215 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 249840000 17383 3697 16475 32990;32991 26429 26429 1 9606 Homo sapiens 0.08425598866756445 LSAEPAPDFSDYSEMAK Unmodified 1856.8138 0.8138453 4571 Q9NQC3;Q9NQC3-4;Q3LIF4;Q9NQC3-6;Q53RF4 RTN4;Nbla00271 Reticulon-4;Reticulon yes no 0 0 0 4 0 1 60.241 60.243 3 0.052476 18421 20230619_1883_Aki_TMTPro18x_K_F4 51.495 40.861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17384 4571 16476 32992 26430 26430 1 9606 Homo sapiens -0.08028907023731335 LSAIPVSAFCNSETK Unmodified 1622.7974 0.79740737 2607 B4DW13;Q6YP21-3;Q6YP21 hCG_23341;CCBL2 Kynurenine--oxoglutarate transaminase 3 yes no 0 0 0 1.5 0.5 1 1 59.704 59.711 3 1.3784E-08 18399 20230619_1880_Aki_TMTPro18x_K_F1 143.58 131.22 35705 34565 36322 37493 29443 34293 34434 30355 32176 41874 38719 37996 44753 36188 44092 52599 40087 40489 33058 31656 36748 37596 31261 34847 34379 31615 33223 41572 39691 38710 45431 38250 44675 51892 38397 38583 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137680000 17385 2607 16477 32993;32994 26431 26431 1 9606 Homo sapiens 0.010920566007825983 LSAKPAPPKPEPK Unmodified 1358.7922 0.79218606 3390 P05204;A0A994J3W4;A0A087WZE9;Q15651-2;Q15651 HMGN2;HMGN3 Non-histone chromosomal protein HMG-17;High mobility group nucleosome-binding domain-containing protein 3 yes no 0 0 2 3 0 1 42.18 42.243 4 0.049601 10555 20230619_1882_Aki_TMTPro18x_K_F3 52.265 31.014 213540 164520 210680 220960 253200 232300 271520 246620 187100 200080 271830 136950 115200 82491 303900 73771 86140 66893 197360 151110 214930 218660 259480 234450 270140 249760 198580 202600 267500 140340 131070 86549 292430 74671 84390 63679 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114700000 17386 3390 16478 32995 26432 26432 1 9606 Homo sapiens 0.12714165591160054 LSALESR Unmodified 774.42357 0.42356738 4548 Q9HC35;B5MBZ0;Q9HC35-2;B6EXY3;C1PHA1;J7MA22;C1PHA0;B3XZL9;B3XZM0;A9YLN7;I1X3U7;B6EXY4;B6EXY5 EML4;EML4-ALK variant 7;EML4-ALK;EML4-ALK variant 6;EML4/ALK fusion Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 0 6 0 1 43.111 43.204 2 0.033749 10886 20230619_1886_Aki_TMTPro18x_K_F6 93.561 27.885 192650 123800 181760 150390 154860 193600 146520 144570 204170 199300 220110 202510 217320 161240 174530 180410 228460 219690 177820 113680 184930 150310 163100 191330 150130 152540 205370 198650 224750 204000 219720 168880 181220 183170 218010 208280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122990000 17387 4548 16479 32996 26433 26433 1 9606 Homo sapiens 0.027332538005680362 LSALLQETK Unmodified 1001.5757 0.57571092 3285 O60763;O60763-2 USO1 General vesicular transport factor p115 yes no 0 0 0 4.5 3.5 1 1 59.301 59.321 3 0.00082116 17529 20230619_1888_Aki_TMTPro18x_K_F8 102.06 77.207 82693 66963 74420 81410 73661 87409 79187 82397 94635 67396 69828 72225 66939 57728 78615 80496 74255 57888 76396 61430 76319 81108 76811 87803 80009 84131 94462 69107 72733 72646 68983 61179 79501 79268 70975 55282 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37326000 17388 3285 16480 32997;32998 26434;26435 26435 2 9606 Homo sapiens 0.07498609757465147 LSANQQNILK Unmodified 1127.6299 0.62987176 595 D6RAA6;A6QKW0;A0A024R9W7;P57088;H0Y8N0 TMEM33;SHINC3 Transmembrane protein 33 yes no 0 0 0 1.5 0.5 1 1 48.277 48.313 2;3 0.00086358 13662 20230619_1881_Aki_TMTPro18x_K_F2 94.804 57.65 334380 259450 323790 331680 354400 394200 400140 391710 466490 453480 419300 401910 479840 397490 404530 492850 511760 473510 309010 238180 330350 329870 367020 393780 402770 401890 469780 453510 434920 410330 484300 415310 419060 492400 488340 450090 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 770160000 17389 595 16481 32999;33000 26436;26437;26438 26438 3 9606 Homo sapiens 0.07116201909047959 LSCFAQTVSPAEK Unmodified 1436.697 0.69696505 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 0 3.8 3.06 2 1 1 1 54.458 54.489 2;3 2.8771E-16 16182 20230619_1880_Aki_TMTPro18x_K_F1 265.82 206.85 507320 393520 452330 474150 431070 505070 503940 502090 551870 636940 567390 572560 653300 542040 578540 661840 628240 645370 468530 361030 463910 472710 451770 508310 505490 516690 560760 634400 585230 583070 660410 566610 592820 662020 600730 613090 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3814599999.9999995 17390 1426 16482 33001;33002;33003;33004;33005 26439;26440;26441 26439 3 9606 Homo sapiens -0.0039155566216777515 LSCLPAFK Unmodified 934.49462 0.49462383 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3.5 0.5 2 2 57.874 57.891 2;3 0.013204 17402 20230619_1883_Aki_TMTPro18x_K_F4 71.501 48.482 192050 148940 183490 198120 160710 183090 198890 194180 199990 212120 196430 190170 217700 181820 219790 231750 216130 218400 177460 136780 186860 195830 169780 186510 198410 198130 203660 212710 202670 193830 221590 190500 223330 231310 206840 207570 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 257620000 17391 3881 16483 33006;33007;33008;33009 26442;26443;26444 26444 3 9606 Homo sapiens 0.024756305137316303 LSCQPMLSLDDFQLQPPVTFR Oxidation (M) 2507.2189 0.21886626 3311 O75607 NPM3 Nucleoplasmin-3 yes yes 0 1 0 2 0 1 64.182 64.19 3 5.6303E-09 20472 20230619_1881_Aki_TMTPro18x_K_F2 119.16 101.67 17183 10499 13014 15254 13647 15165 16068 14430 16889 19783 16671 15450 21815 16532 14319 20746 15391 23245 15832 9661.7 13591 15006 14200 15322 16082 14939 17176 19574 17324 15922 21729 17261 14790 20898 14770 22023 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74580000 17392 3311 16484 33010 26445 26445 1943 1 9606 Homo sapiens 0.02554558391966566 LSCVPVLIFANK Unmodified 1359.7584 0.75844309 3553 P36405 ARL3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 5.67 0.471 1 2 63.736 63.782 2;3 7.3636E-08 19843 20230619_1886_Aki_TMTPro18x_K_F6 172.69 127.53 198220 155670 188640 197210 169010 175410 182200 183330 205940 245100 230290 231120 255230 206810 211880 271120 244230 274670 183170 142890 192140 195490 177410 179270 183790 188430 209680 243890 236190 234450 257570 217620 218340 271430 233580 260740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 616250000 17393 3553 16485 33011;33012;33013 26446;26447 26447 2 9606 Homo sapiens 0.09295420827766065 LSDADLAGPLQK Unmodified 1226.6507 0.65066678 2356 B4E0B7;B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 6 0 1 55.759 55.836 2 1.1372E-05 16398 20230619_1886_Aki_TMTPro18x_K_F6 142.83 112.57 32721 27633 33213 33888 27716 37128 37911 35277 39502 42917 44025 41734 46379 40996 38438 46162 42708 45593 30266 25348 33632 33756 29541 37241 37687 36377 40345 42928 45039 42406 46891 42581 39506 46255 40841 43300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49114000 17394 2356 16486 33014 26448 26448 1 9606 Homo sapiens 0.04640747498046949 LSDETLIDIMTR Unmodified 1405.7123 0.71228076 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;A0A994J428;B3KRA9;A0A994J4Q4;A0A994J6R6;A0A994J4P6;A0A994J4A4;B1AR62;A0A994J6Q7;A0A994J499;A0A994J495 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 5 0 1 63.781 63.827 3 0.0031243 19655 20230619_1885_Aki_TMTPro18x_K_F5 82.543 52.855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17395 43 16487 33015 26449 26449 1 9606 Homo sapiens 0.02565311135003867 LSDFGLCTGLK Unmodified 1209.6064 0.60635913 4707;745 A0A024RD18;B2R6F9;Q15208;Q9Y2H1-2;Q9Y2H1;H0YGN4;F5H277;A0A024RAW5 STK38;STK38L Serine/threonine-protein kinase 38;Serine/threonine-protein kinase 38-like no no 0 0 0 2 0 1 61.435 61.446 3 0.0041887 19224 20230619_1881_Aki_TMTPro18x_K_F2 70.488 53.121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17396 745;4707 16488 33016 26450 26450 1 9606 Homo sapiens 0.009940200802020627 LSDFNDITNMLLLK Unmodified 1635.8542 0.85419397 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2.5 0.5 1 1 66.262 66.283 3 4.5309E-09 21310 20230619_1881_Aki_TMTPro18x_K_F2 162.97 126.44 32768 25939 32710 31778 26176 33345 33033 31393 33108 39489 38712 36798 43057 37233 38574 39969 35659 46079 30293 23800 33133 31641 27918 33547 32928 32428 33980 39388 39636 37495 43585 38552 39155 40460 34218 43663 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44321000 17397 3758 16489 33017;33018 26451 26451 1 9606 Homo sapiens 0.06170104157354217 LSDGDMTSALR Unmodified 1164.5445 0.54448715 214 A0A0U1RQJ8;A0A024R307;A0A024R2U4;Q8WXE1-5;Q8WXE1-3;Q8WXE1-2;Q8WXE1 TREX1;ATRIP ATR-interacting protein yes no 0 0 0 2.5 0.5 1 1 51.723 51.775 2 0.0096715 15195 20230619_1881_Aki_TMTPro18x_K_F2 73.985 32.956 85540 59400 70934 92331 81157 103460 83529 94273 99645 94361 91208 87231 108570 83488 92934 107110 99600 111020 78910 54677 73570 90602 83725 103480 84604 96916 100300 95160 94704 88803 109450 87557 95226 107430 95311 105360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 503650000 17398 214 16490 33019;33020 26452 26452 1 9606 Homo sapiens -0.031203313389369214 LSDGELLFECAGHK Unmodified 1574.7399 0.73989249 2749 C9JTS3;Q59EM1;C9JG97;C9JEH3;Q13685 AAMP Angio-associated migratory cell protein yes no 0 0 0 4 0 1 56.31 56.318 3 0.0003158 16784 20230619_1883_Aki_TMTPro18x_K_F4 103.14 83.813 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17399 2749 16491 33021 26453 26453 1 9606 Homo sapiens -0.024487856047471723 LSDGFNGADLR Unmodified 1163.5571 0.55710075 896 V9HW24;A0A087X2I1;P62333;H0YJC0 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 4 0 1 49.883 49.917 2 0.0075774 13968 20230619_1883_Aki_TMTPro18x_K_F4 79.889 47.955 150170 119600 138590 170630 152440 193900 164550 160310 214780 186540 195940 210970 218330 173590 193170 214870 218030 227520 138750 109910 142190 168300 157880 193420 166730 166840 215160 187960 202990 211760 220870 182540 198360 215910 208430 215930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82237000 17400 896 16492 33022 26454 26454 1 9606 Homo sapiens -0.018135518844019316 LSDGIGVMLPQVLK Unmodified 1468.8323 0.83233632 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 3 0 1 63.856 63.886 3 0.030975 20085 20230619_1882_Aki_TMTPro18x_K_F3 48.527 18.468 31535 25093 28473 28809 24737 29539 32592 30166 33252 37622 32115 35798 34322 33751 33355 39627 34077 37544 29131 23009 29129 28811 26219 29832 32427 30979 33824 37560 33134 36337 34945 35172 34012 39596 32622 35669 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59587000 17401 1853 16493 33023 26455 26455 1 9606 Homo sapiens 0.11667344199440777 LSDGIRK Unmodified 787.4552 0.45520186 1232 A0A140VK56;P37837-2;P37837;Q9UMF8 TALDO1 Transaldolase yes no 0 0 1 1 0 1 38.659 38.659 3 0.056259 9475 20230619_1880_Aki_TMTPro18x_K_F1 60.895 19.708 360360 180500 388340 401970 557110 478650 435050 543720 538390 356730 550170 574630 468480 420880 411960 267700 669220 499380 332620 167340 394570 388450 561040 479540 449230 545670 542300 377220 560380 567940 478430 431200 433170 285010 636640 472480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193440000 17402 1232 16494 33024 26456 26456 1 9606 Homo sapiens 0.05297246554528101 LSDGVAVLK Unmodified 900.52803 0.52803245 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 4.5 3.04 1 1 1 1 53.519 53.561 2 1.0726E-05 15104 20230619_1887_Aki_TMTPro18x_K_F7 172.11 115.7 910410 710180 826740 899800 1001500 1069100 1104800 1034700 1193600 1124200 1148100 1093900 1243300 988930 1049900 1307300 1199300 1168700 840950 651870 849960 895290 1029000 1067500 1110300 1061800 1209200 1130600 1183800 1108900 1256300 1040600 1080600 1300100 1145800 1111600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 10347000000 17403 272 16495 33025;33026;33027;33028 26457;26458;26459 26458 3 9606 Homo sapiens 0.07378955557283007 LSDIWAK Unmodified 831.44905 0.44905385 338 Q9UBM7;A0A804HJQ7;A8K0D2;A0A1Y1B909;X5DNI9;A0A024R5F7;A0A804HI25;A0A8I5KRR9;E9PJ54;A0A0S2Z3N8;E9PIP9;E9PQ71;X5D9E1;E9PRL8;A0A0S2Z3S3;X5DRD7;A0A804HJI8;A0A804HL56;E9PM00;E9PLZ2 DHCR7 7-dehydrocholesterol reductase yes no 0 0 0 1 0 1 57.992 57.992 2 0.023568 17679 20230619_1880_Aki_TMTPro18x_K_F1 107.67 33.483 246480 220270 279290 270600 177770 219770 261780 270430 288590 295940 283880 261930 369370 274200 253240 357460 310010 284460 228290 202020 279430 268620 195020 227230 260100 273480 292410 296650 294970 268110 368500 286950 263250 353500 295890 271050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137200000 17404 338 16496 33029 26460 26460 1 9606 Homo sapiens 0.026587283229901004 LSDLDSETR Unmodified 1034.488 0.48801813 4703 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 1.5 0.5 1 1 43.532 43.574 2 4.1951E-17 11671 20230619_1880_Aki_TMTPro18x_K_F1 247.07 202.67 739100 487390 602440 703420 767320 851110 705320 737330 982870 877190 867360 900940 961480 748170 776830 851400 1080200 940650 681550 448330 626390 694130 783240 846600 723260 764700 981080 880080 899420 907980 969420 782760 810230 858740 1029600 893000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1017499999.9999999 17405 4703 16497 33030;33031 26461;26462 26461 2 9606 Homo sapiens -0.027846359039585877 LSDLLAPISEQIK Unmodified 1425.8079 0.80789571 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;B4DNY3;Q5T0R2;Q5T0R1;Q5T0R4;Q5T0R3;Q5T0R5;Q5T0R6;Q5T0R7;Q5T0R9 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 0 0 1 0 1 64.004 64.004 3 4.0938E-05 20129 20230619_1880_Aki_TMTPro18x_K_F1 113.95 89.093 15465 11684 17686 16139 14843 14138 15909 13454 14130 20108 22653 20019 20390 19498 20038 27422 20188 24798 14311 10736 17724 15909 15640 14439 15938 13982 14854 19954 22726 20333 20875 20535 20435 27258 19346 23564 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29206000 17406 2327 16498 33032 26463 26463 1 9606 Homo sapiens 0.11202407317568941 LSDNILK Unmodified 801.45962 0.45961853 4288 Q8WXH0-2;Q8WXH0;D4YW74;G3V5X4;A0A669KBG2 SYNE2;TROPH Nesprin-2 yes no 0 0 0 7.5 0.5 1 1 51.435 51.513 2 0.046915 14283 20230619_1887_Aki_TMTPro18x_K_F7 91.065 18.832 67623 51227 51988 52904 73198 96989 73487 64705 91005 84672 87512 90081 91739 73145 75806 103600 100050 118810 62380 46937 54465 53863 74557 93964 74569 68850 91584 84718 90134 90647 92734 77671 78864 104370 95618 112610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139740000 17407 4288 16499 33033;33034 26464 26464 1 9606 Homo sapiens 0.05094710977436989 LSDQFHDILIR Unmodified 1355.7197 0.7197494 3297 Q53FC3;O75340;A0A024QZ42;O75340-2;H0Y9X3;A0A087WZ38 PDCD6 Programmed cell death protein 6 yes no 0 0 0 7 0 1 54.729 54.793 3 2.7657E-12 15643 20230619_1887_Aki_TMTPro18x_K_F7 176.29 118.01 45844 50406 49171 61285 54338 65723 56510 58822 49115 55779 53100 59670 53765 40828 51123 58613 59281 75465 42508 46195 49833 61035 56097 65952 56647 60497 50666 56616 54380 59741 54701 43730 52530 59520 56753 71439 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 391570000 17408 3297 16500 33035 26465 26465 1 9606 Homo sapiens 0.05611831517626342 LSDVTLVPVSCSELEK Unmodified 1774.9023 0.90226638 3364 V9HW53;O95865 HEL-S-277;DDAH2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes no 0 0 0 5.5 0.5 1 1 61.842 61.894 3 0.00026058 18757 20230619_1885_Aki_TMTPro18x_K_F5 87.566 71.427 161600 136200 143830 186590 128750 205470 188630 141490 195030 160560 183880 186730 177370 166160 177030 174080 173150 193580 149320 125080 147730 184370 137050 204670 186780 149710 197680 162200 188960 187660 181300 172440 179800 175930 165850 183590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 557530000 17409 3364 16501 33036;33037 26466 26466 1 9606 Homo sapiens 0.045811332867515375 LSDYDSSEEAIR Unmodified 1383.6154 0.61540349 1819 Q6PGP7;A0A8V8TMA8;A0A8V8TMB2;A0A8V8TLS3;A0A8V8TLT2;A0A8V8TNJ4;A0A8V8TLU2;A0A8V8TLT7;A0A8V8TLU5;A0A8V8TNK4;A0A8V8TN92;A0A8V8TLR0;A0A8V8TNK9;A0A8V8TNA2;A0A8V8TNJ9;D6RCE2;H0Y915 TTC37 Tetratricopeptide repeat protein 37 yes no 0 0 0 1 0 1 46.167 46.167 2 5.5672E-19 12785 20230619_1880_Aki_TMTPro18x_K_F1 242.49 232.08 49436 38129 47752 46292 49728 55064 51107 50287 60243 64284 68807 68462 74800 59735 56612 76170 79278 74693 45683 34985 48667 46204 51550 54911 51749 52074 61225 64343 70428 69032 75278 62790 59243 76137 75602 70976 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73644000 17410 1819 16502 33038 26467 26467 1 9606 Homo sapiens -0.061059598204110443 LSEAMAR Unmodified 776.38507 0.38507338 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 5 0.816 1 1 1 39.282 39.356 2 0.015107 9232 20230619_1885_Aki_TMTPro18x_K_F5 111.73 30.627 108890 65782 102480 108740 112420 128420 109640 113940 144690 115610 146210 139640 156080 122470 129380 100910 170130 138470 100480 60640 104830 106470 116020 127960 111820 117450 145370 117560 150290 140050 157660 125860 134090 103970 162160 131240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237680000 17411 3892 16503 33039;33040;33041 26468 26468 1 9606 Homo sapiens -0.012063751055961802 LSEDYGVLK Unmodified 1022.5284 0.52842638 3538 V9HW12;P32119;B4DF70;A6NIW5 HEL-S-2a;PRDX2 Peroxiredoxin-2 yes no 0 0 0 5 0.816 2 2 2 53.573 53.629 2;3 2.4271E-06 15307 20230619_1885_Aki_TMTPro18x_K_F5 214.64 122.74 1261000 1046600 1211200 1297900 1283400 1383700 1264600 1233000 1284400 1289400 1495200 1471700 1334500 1316800 1564700 1493300 1536500 1523900 1165800 960190 1236000 1291200 1326600 1389500 1277300 1272000 1315700 1305700 1517600 1481000 1379200 1371800 1585100 1499900 1470300 1447200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5654200000 17412 3538 16504 33042;33043;33044;33045;33046;33047 26469;26470;26471 26470 3 9606 Homo sapiens 0.018063304864767815 LSEEASQALIEAYVDMR Unmodified 1923.9248 0.92479273 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 4.5 0.5 1 1 64.69 64.717 3 6.2498E-19 20050 20230619_1885_Aki_TMTPro18x_K_F5 149.97 132.34 11964 8983.8 8955.9 9113 8984.8 10406 10384 12167 12709 12678 11027 9928.5 17639 12639 10069 12282 13032 14649 11034 8230.5 9349.6 9218.6 9383.1 10467 10464 12311 12761 12704 11666 10299 17418 12950 10547 12475 12451 13882 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31961000 17413 471 16505 33048;33049 26472 26472 1 9606 Homo sapiens -0.00021267315651130048 LSEEFLTAHPR Unmodified 1298.6619 0.66190017 1356 Q15813-2;Q15813;A0A2R8Y5Q8;A0A2R8YHI9;A0A2R8Y7E7;A0A2U3TZJ6;A0A2R8Y6Q1 TBCE Tubulin-specific chaperone E yes no 0 0 0 5 0.816 1 1 1 46.971 47.038 3 6.2883E-51 12478 20230619_1885_Aki_TMTPro18x_K_F5 294.24 222.89 104800 76399 89683 80455 90194 90005 94217 84651 95012 56772 50843 48037 59385 41489 67393 57281 50691 51099 96722 70023 92292 81111 93701 90223 94768 86139 94903 58672 54645 48982 60659 43891 67410 56997 48665 48598 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221440000 17414 1356 16506 33050;33051;33052 26473 26473 1 9606 Homo sapiens 0.024515695921536462 LSEELSGGR Unmodified 946.47197 0.47197413 622 P61158;A0A024RAI1;Q59FV6;B4DXW1;B4DT29;B4DTI0;B4E1U3;Q59GD5;Q9P1U1;Q9P1U1-2;B7Z9W3;B3KM55 ACTR3;ACTR3B Actin-related protein 3;Actin-related protein 3B yes no 0 0 0 2.5 0.5 1 1 42.247 42.318 2 0.003117 10868 20230619_1881_Aki_TMTPro18x_K_F2 100.09 34.856 185130 127740 179490 181310 254770 265370 222400 228120 288480 236660 253580 250510 257960 216610 213270 233120 301450 251600 170980 117460 183930 179730 257800 261080 228110 235750 288680 239280 261910 252510 261100 225470 222590 235000 287230 238950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 330700000 17415 622 16507 33053;33054 26474;26475 26474 2 9606 Homo sapiens -0.0034029735016929408 LSEGSQPAEEEEDQETPSR Unmodified 2116.9033 0.90326525 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 0 1 0 1 39.551 39.551 3 4.9868E-31 9882 20230619_1880_Aki_TMTPro18x_K_F1 219.95 212.72 28497 23157 32457 32457 30578 34723 32442 33339 41313 35116 36271 45320 42389 35655 35362 42552 48505 41294 26380 21275 32613 32039 31970 34898 32887 34208 41376 35713 37775 45191 42750 37452 36843 42563 46232 39261 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136970000 17416 2896 16508 33055 26476 26476 1 9606 Homo sapiens -0.11051025601273068 LSEGVTISYK Unmodified 1095.5812 0.58119023 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 0 7.5 0.5 1 1 52.354 52.428 2 2.313E-16 14567 20230619_1888_Aki_TMTPro18x_K_F8 191.67 147.86 72374 54261 64753 74756 71069 81461 85954 78415 93935 88775 87250 102610 92852 78503 91191 98830 91080 101260 66829 49859 66584 73872 73757 81772 86014 80627 94981 89583 90202 102670 94506 82841 92799 99105 87216 96115 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54214000 17417 1647 16509 33056;33057 26477;26478 26478 2 9606 Homo sapiens 0.037222885493065405 LSEHATAPTR Unmodified 1081.5516 0.55162144 3541 P33316-2;H0YNW5;P33316;H0YKC5;H0YNJ9;H0YMM5;A0A0C4DGL3;H0YKI0 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes no 0 0 0 5 0 1 30.084 30.159 3 4.2397E-05 5737 20230619_1885_Aki_TMTPro18x_K_F5 122.69 95.576 26434 15598 43909 43804 54203 57601 37957 48038 29302 26297 49341 55959 32683 28386 41369 17879 45510 49835 24534 14515 43293 42036 54962 56920 39022 49145 31104 28608 49015 54481 34291 29657 42011 19998 43533 46979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37397000 17418 3541 16510 33058 26479 26479 1 9606 Homo sapiens 0.014107693237974672 LSEITEKPPR Unmodified 1168.6452 0.64518747 57 A0A024QZQ1;Q96EB6;B3KNK3;I1Y8W7;B0QZ35;E9PC49;A8K128 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes no 0 0 1 7 0 1 43.681 43.76 3 0.00017509 10804 20230619_1887_Aki_TMTPro18x_K_F7 124.67 80.533 68963 54652 67796 72658 77205 83235 78398 77640 98045 93112 90146 84734 97602 80104 81033 93299 98666 89803 63747 50187 69137 72022 79495 83234 79580 80106 98481 93046 93133 86253 98587 83501 83727 93322 94171 85365 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28559000 17419 57 16511 33059 26480 26480 1 9606 Homo sapiens 0.06761068706236983 LSELDDRADALQAGASQFETSAAK Unmodified 2493.1983 0.19832505 3945 Q6FGG2;Q15836;K7ENK9;K7EKX0;J3QRU4;F8WCA0;L7N2F9;P63027 VAMP3;VAMP2 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2 yes no 0 0 1 4.5 0.5 1 1 58.488 58.517 3 5.5166000000000006E-27 17724 20230619_1883_Aki_TMTPro18x_K_F4 175.47 161.01 78410 82358 97975 84636 112050 106090 120350 117320 128320 114120 120440 117620 118540 105460 127560 136070 141000 142510 72782 75372 98028 85666 115290 105990 121100 118960 129930 115620 123890 118900 121530 110800 130340 136570 134790 135280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102400000 17420 3945 16512 33060;33061 26481;26482 26481 2 9606 Homo sapiens 0.01145382537470141 LSELGWLHNK Unmodified 1195.635 0.63495714 2625 B4DYP7;Q96CW5-2;Q96CW5;A0A3B3ITE3;A0A087WU06;Q96CW5-3 TUBGCP3 Gamma-tubulin complex component 3 yes no 0 0 0 1.5 0.5 1 1 54.937 54.949 3 0.00045557 16598 20230619_1881_Aki_TMTPro18x_K_F2 104.52 53.431 40516 40524 41765 41084 38612 43303 39410 44137 52838 47860 40833 48147 44619 41466 47839 50201 51624 55706 37525 37088 42266 41507 40403 43661 40126 45119 52606 48184 42688 48609 45609 43452 48812 50607 49385 52837 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51665000 17421 2625 16513 33062;33063 26483 26483 1 9606 Homo sapiens 0.044965057716581214 LSELQLR Unmodified 857.49707 0.49706667 464 B2R8A2;A0A024R7M0;Q9BVK6 TMED9 Transmembrane emp24 domain-containing protein 9 yes no 0 0 0 7.5 0.5 1 1 49.73 49.808 2 0.01446 13436 20230619_1887_Aki_TMTPro18x_K_F7 112.59 14.997 457080 352940 380140 430980 421060 539220 486050 485900 656010 566750 519940 572530 646870 521730 446600 710690 553990 666640 421920 323860 393620 430190 436940 535620 491350 502130 653260 568920 545500 579310 646610 549930 465100 707840 529800 633240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 662300000 17422 464 16514 33064;33065 26484 26484 1 9606 Homo sapiens 0.06261802243034253 LSEQELQFR Unmodified 1148.5826 0.58258722 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 0 0 4 0.816 1 1 1 50.203 50.264 2 0.00013348 14084 20230619_1883_Aki_TMTPro18x_K_F4 176.43 91.684 538480 454460 505200 566440 570110 674030 621100 573990 660140 642250 656330 622630 763240 595440 641720 741080 660560 703470 497760 416950 517420 564110 588790 671010 624380 595250 670350 645020 678010 632380 769390 623050 656290 740010 632140 668400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 663590000 17423 3954 16515 33066;33067;33068 26485 26485 1 9606 Homo sapiens 0.014239226380595937 LSESQLSFR Unmodified 1065.5455 0.54547343 1111 A0A0S2Z4Z0;Q96PK6;B4DNG4 RBM14 RNA-binding protein 14 yes no 0 0 0 7.5 0.5 1 1 49.026 49.11 2 7.8407E-11 13179 20230619_1888_Aki_TMTPro18x_K_F8 174.41 146.23 686780 552810 563650 629800 627870 704310 691740 628650 740680 714740 683630 688310 790310 592850 675780 852040 739900 699240 634040 506830 584220 630730 649180 704960 695090 649960 749790 717040 708800 697000 797300 628540 693700 842990 707030 665910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 786590000 17424 1111 16516 33069;33070 26486;26487 26487 2 9606 Homo sapiens 0.015322510922715082 LSESVLSPPCFVR Unmodified 1489.7599 0.75989966 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7ZAX6;F5H2X1;B7Z842;H3BUV0;H3BTM1;H3BRA2;H3BQD1 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 2 0 1 60.06 60.071 2 0.00031069 18639 20230619_1881_Aki_TMTPro18x_K_F2 132.32 102.15 43764 42291 42116 46340 48295 47506 49301 48785 51404 53507 53020 50361 60443 50596 57331 63935 57095 62918 40500 38735 43032 46498 49654 48013 49722 49879 52348 53726 54641 51310 61297 52899 58378 63958 54670 59750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27530000 17425 1601 16517 33071 26488 26488 1 9606 Homo sapiens 0.03461010125852226 LSETISEGTSNSLSTCTK Unmodified 1913.8888 0.88880116 3056 H0YM23;O75179-6;O75179-7;O75179-2;O75179;O75179-4;B3KU50 ANKRD17 Ankyrin repeat domain-containing protein 17 yes no 0 0 0 6 0 1 51.336 51.413 3 3.98E-08 14509 20230619_1886_Aki_TMTPro18x_K_F6 131.82 114.61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17426 3056 16518 33072 26489 26489 1 9606 Homo sapiens -0.03158769283163565 LSEYPNVEELR Unmodified 1347.667 0.66704513 1383 E9PMR6;A0A2X0SFF5;Q9NZN5-2;Q9NZN5;B4DGW2;B4E2K6 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 0 0 0 3 0 1 52.828 52.887 2 0.00029087 15464 20230619_1882_Aki_TMTPro18x_K_F3 121.36 72.937 60977 59333 70529 72299 61205 85639 71858 76358 85987 77309 78425 71550 84626 63237 79395 83568 81805 76759 56524 54398 70745 72125 64732 85325 72304 78654 86481 77926 81049 72662 85867 66618 80979 83261 78212 72997 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27174000 17427 1383 16519 33073 26490 26490 1 9606 Homo sapiens 0.007118286641571103 LSFAVPFR Unmodified 935.52289 0.52288749 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5.5 0.5 1 1 60.793 60.851 2 0.0050535 18247 20230619_1885_Aki_TMTPro18x_K_F5 103.75 80.6 125960 140250 146520 139740 153240 174350 173230 158390 148120 62736 63667 43925 43214 41768 127310 58131 57079 42912 116900 128300 147220 141720 159050 173350 172670 160390 148660 68095 68480 45538 48765 43992 123720 57529 55193 40971 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54191000 17428 3758 16520 33074;33075 26491;26492 26491 2 9606 Homo sapiens 0.05254696485326349 LSFFGLEK Unmodified 939.50657 0.50656873 270 A0A024R3W5;Q9ULF5;E7ENT5;E7EV45 SLC39A10 Zinc transporter ZIP10 yes no 0 0 0 2.5 0.5 1 1 62.833 62.852 2 0.052049 19871 20230619_1881_Aki_TMTPro18x_K_F2 70.747 25.435 64835 49871 53411 61750 49313 58505 57148 50763 66964 57511 60924 54672 59531 43538 67497 63459 58433 58811 59842 45768 55196 61330 51831 59228 57465 52619 67390 57699 62712 55290 61123 46362 67974 63203 55999 55907 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105750000 17429 270 16521 33076;33077 26493 26493 1 9606 Homo sapiens 0.03439570528564673 LSFGDAAQTLWAR Unmodified 1434.7256 0.72556306 4644 Q9P265;Q96IB4 DIP2B Disco-interacting protein 2 homolog B yes no 0 0 0 3 0 1 62.457 62.487 2 0.086121 19464 20230619_1882_Aki_TMTPro18x_K_F3 55.258 27.637 31150 23032 28083 28767 27119 35682 32022 30672 35544 33464 32119 39522 40054 28506 35248 38703 37355 42331 28763 21142 28781 28670 28432 35426 32111 31760 35884 33855 33516 39451 40364 30335 36063 38919 35755 40150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37511000 17430 4644 16522 33078 26494 26494 1 9606 Homo sapiens 0.025589300292722328 LSFPSIKPDTDQTLK Unmodified 1688.8985 0.89850163 327 A0A994J414;A0A024R582;J3KMZ8;A0A994J6A8;Q92785;A0A994J426;A0A994J6N1;Q92785-2 DPF2 Zinc finger protein ubi-d4 yes no 0 0 1 2 0 2 57.689 57.704 3;4 7.8845E-09 17672 20230619_1881_Aki_TMTPro18x_K_F2 118.53 87.566 84006 66366 73359 81002 75832 89989 92139 84523 110780 103770 92974 96894 117800 91378 92864 115140 108580 108310 77580 60891 75506 80717 79105 90181 92492 87255 111130 103670 97326 98486 118220 95740 95857 114870 103730 102950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58583000 17431 327 16523 33079;33080 26495;26496 26496 2 9606 Homo sapiens 0.08160831575173688 LSFQHDPETSVLVLR Unmodified 1739.9206 0.92063405 3900;2497;4425 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2;Q9BS14 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 7 0 1 55.389 55.45 3 0.00034727 15938 20230619_1887_Aki_TMTPro18x_K_F7 89.466 78.204 23388 26214 34171 32747 25497 32066 32708 28784 32157 29123 37887 37204 33122 27210 31765 34429 34931 41479 21758 24030 33682 32530 27355 32395 32559 29671 32986 29661 38390 37075 33882 28789 32518 34865 33437 39298 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 315050000 17432 3900;2497;4425 16524 33081 26497 26497 1 9606 Homo sapiens 0.0802705604357925 LSFYETGEIPR Unmodified 1310.6507 0.65066678 2138 A8K9K6;O00567;A0PJ92;A0A494C128;H0YDU4;H0Y653 NOP56 Nucleolar protein 56 yes no 0 0 0 6 0 1 55.836 55.911 2 0.0001111 16386 20230619_1886_Aki_TMTPro18x_K_F6 136.96 108.26 64542 49431 57855 71912 53389 68373 70297 63469 69636 83036 86994 94250 101070 85360 85113 98102 87431 107200 59605 45445 59363 70684 56334 69255 69881 65750 71729 83194 89103 94853 101930 89031 87036 98851 83768 101650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90658000 17433 2138 16525 33082 26498 26498 1 9606 Homo sapiens 0.0077674749804828025 LSFYETGEIPRK Unmodified 1438.7456 0.7456298 2138 A8K9K6;O00567;A0PJ92;A0A494C128;H0YDU4;H0Y653 NOP56 Nucleolar protein 56 yes no 0 0 1 8 0 1 51.836 51.913 3 5.232E-07 14368 20230619_1888_Aki_TMTPro18x_K_F8 153.25 118.78 710480 674090 652330 584740 836990 677560 715020 707090 711760 809660 801440 719880 823790 667270 876080 922770 756040 804460 657170 616300 669480 600010 849560 680100 728150 722860 729750 809780 818800 733670 842100 703640 883620 916460 724870 765160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 310390000 17434 2138 16526 33083 26499 26499 1 9606 Homo sapiens 0.04380680969211426 LSGAGGAGGFR Unmodified 948.47773 0.47772821 3949 Q16352 INA Alpha-internexin yes yes 0 0 0 1.5 0.5 1 1 40.577 40.614 2 1.3881E-08 10358 20230619_1880_Aki_TMTPro18x_K_F1 179.28 131.53 677890 563130 650690 487640 160350 184580 220710 209730 254510 593110 687550 706790 669240 554140 599340 737500 1291900 762560 626680 515080 654490 495740 207270 211060 221530 223450 275630 581630 684260 707070 680930 586360 649360 739120 1225700 725960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 383090000 17435 3949 16527 33084;33085 26500;26501;26502 26501 3 9606 Homo sapiens 0.0014284595214348883 LSGFSFK Unmodified 784.41194 0.41194006 3524 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 4 0.816 1 1 1 57.289 57.321 2 0.0050551 17180 20230619_1883_Aki_TMTPro18x_K_F4 143.85 43.787 1204300 871980 884610 1199700 790170 924550 1018000 1070600 1004000 1056800 1030400 1061300 1087500 757260 245120 2028800 466350 1248100 1110300 801340 925700 1180500 835360 958830 1013100 1083800 1025000 1068200 1057200 1069500 1067100 857780 286790 1968600 449470 1190900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3347499999.9999995 17436 3524 16528 33086;33087;33088 26503 26503 1 9606 Homo sapiens 0.011110567772448121 LSGIEER Unmodified 802.41848 0.418482 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 39.966 40.029 2 0.010386 9591 20230619_1882_Aki_TMTPro18x_K_F3 118.05 41.218 351990 225220 319450 358100 449500 427430 441680 445220 568370 409260 477610 493710 496610 424260 424920 344590 571330 492720 324790 207450 329370 351450 456110 427330 449500 452590 567710 418390 495150 494730 503020 435900 440900 356190 544680 466700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 415150000 17437 2337;3778;3779 16529 33089;33090 26504;26505 26505 2 9606 Homo sapiens 0.009369499379545232 LSGLEQPQGALQTR Unmodified 1496.7947 0.79470526 2945 E9PS41;Q6RFH5;Q6RFH5-2;H0YFP2 WDR74 WD repeat-containing protein 74 yes no 0 0 0 7 0 1 49.063 49.147 2 0.0020442 13200 20230619_1887_Aki_TMTPro18x_K_F7 89.013 59.926 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17438 2945 16530 33091 26506 26506 1 9606 Homo sapiens 0.06617969258172707 LSGLNAFDIAEELVK Unmodified 1617.8614 0.86138784 2349 B3KMA8;K7EIE8;O95983-2;O95983;A0A0A0MTS6;A0A087WT34;A0A087X1H1 MBD3 Methyl-CpG-binding domain protein 3 yes no 0 0 0 7 0 1 65.842 65.866 3 0.024725 20500 20230619_1887_Aki_TMTPro18x_K_F7 51.727 30.774 14232 11066 11230 11993 11715 16113 10121 10982 19521 12464 11839 12530 12692 11077 13826 12394 13868 13623 13133 10143 11670 12089 12142 15859 10586 11611 19031 12542 12551 12662 12986 11546 14033 12508 13267 12927 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36266000 17439 2349 16531 33092 26507 26507 1 9606 Homo sapiens 0.07717160029392289 LSGLSFK Unmodified 750.42759 0.42759012 3602 P49006 MARCKSL1 MARCKS-related protein yes yes 0 0 0 3.5 0.5 1 1 55.249 55.275 2 0.007192 16316 20230619_1883_Aki_TMTPro18x_K_F4 127.12 27.051 701510 472700 469540 783460 600860 728400 338850 788930 780340 779260 622390 789100 775620 906420 289510 1561600 164760 940410 646180 435530 499860 764060 608970 741470 371700 800400 764700 788440 652840 806020 765170 963530 303670 1520000 164220 896950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 889850000 17440 3602 16532 33093;33094 26508 26508 1 9606 Homo sapiens 0.04239343294284481 LSGSNPYTTVTPQIINSK Unmodified 1919 6.5851E-06 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3 ACTN4 Alpha-actinin-4 yes no 0 0 0 3 0 1 57.476 57.508 3 5.8998E-19 17361 20230619_1882_Aki_TMTPro18x_K_F3 185.3 166.7 50129 45713 50543 52271 43339 46043 48190 44908 46325 61496 60450 55161 58992 52133 57657 62563 60689 60395 46389 41893 51203 52185 45687 47034 48285 46424 47930 61043 61267 56193 60197 54425 58848 62571 58036 57387 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 241160000 17441 1069 16533 33095 26509 26509 1 9606 Homo sapiens 0.07726658207093351 LSGTGSAGATIR Unmodified 1089.5778 0.57783619 1521 A0A3B3ITK7;P36871;B4DFP1;B7Z6C2;P36871-3;P36871-2;B4DDQ8 PGM1 Phosphoglucomutase-1 yes no 0 0 0 1 0 1 38.375 38.375 2 0.00027635 9382 20230619_1880_Aki_TMTPro18x_K_F1 113.46 75.901 27616 21157 30515 28553 37941 40604 33393 35402 43860 29913 41181 41336 41594 35162 39594 40551 45587 46798 25548 19434 30854 28383 38700 40018 34263 36370 43928 30903 42396 41262 42348 36761 40633 41011 43567 44378 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41275000 17442 1521 16534 33096 26510 26510 1 9606 Homo sapiens 0.0366303849527867 LSGVMVPAPIQDLEALR Unmodified 1807.9866 0.98660513 4650 Q9UBB4;A0A1W2PQD2;Q9UBB4-2 ATXN10 Ataxin-10 yes no 0 0 0 8 0 1 64.402 64.422 2 6.1597E-22 19698 20230619_1888_Aki_TMTPro18x_K_F8 182.55 146.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17443 4650 16535 33097 26511 26511 1 9606 Homo sapiens 0.11493128894153415 LSHEGPGSELPAGALYR Unmodified 1752.8795 0.87949752 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;E7EWF7 DCTN1;DKFZp686I0746 Dynactin subunit 1 yes no 0 0 0 5 0 1 46.788 46.865 3 0.00010555 12413 20230619_1885_Aki_TMTPro18x_K_F5 89.437 78.179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17444 1717 16536 33098 26512 26512 1 9606 Homo sapiens 0.03317295004148946 LSHETVTIELK Unmodified 1268.6976 0.69761697 3718 P62314;J3QLR7 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes no 0 0 0 6.5 0.5 1 1 49.058 49.136 2;3 1.2421E-12 13504 20230619_1886_Aki_TMTPro18x_K_F6 179.19 99.721 185970 79688 171080 214350 193290 190840 197080 196090 180770 218880 212000 238270 209420 175400 152390 224440 230480 299950 171340 74228 175590 204780 198890 194700 198060 200660 186560 220410 216050 238740 211150 185740 160700 228710 220250 283840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 456840000 17445 3718 16537 33099;33100 26513;26514 26513 2 9606 Homo sapiens 0.07401607049177983 LSHLLSEKPEDK Unmodified 1394.7405 0.74054442 2345 B3KM73;D3DVL7;B4DU42;Q969Z0-2;Q969Z0;C9J7P5;C9J5A2;C9J347 TBRG4 Protein TBRG4 yes no 0 0 1 6.5 0.5 1 1 47.415 47.499 4 0.00031578 12836 20230619_1886_Aki_TMTPro18x_K_F6 107.17 78.36 124170 76765 98480 119810 129120 122510 129570 131470 164800 112760 132730 129550 130080 117020 131410 128410 141830 145330 114450 70703 102750 117420 131670 123880 131660 133210 164430 115560 137570 130380 132980 121710 134160 129820 135620 137840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 656870000 17446 2345 16538 33101;33102 26515;26516 26515 2 9606 Homo sapiens 0.05896377106591899 LSHSDEKPYQCPVCQQR Unmodified 2130.9575 0.95750662 3108 Q9UJ31;Q59GP8;I3L2Z5;Q8WZ46;Q8IUI2;P56270-3;P56270;P56270-2 A-328A3.4;MAZ Myc-associated zinc finger protein yes no 0 0 1 7 0 1 37.286 37.35 4 8.3353E-06 8208 20230619_1887_Aki_TMTPro18x_K_F7 101.9 87.587 19951 5164.1 20125 24049 22340 14892 26665 19900 19120 28913 33770 21343 16461 14607 22645 12420 13231 10573 18371 4908.4 20479 22576 23040 15861 26398 20254 20500 28475 33125 21784 17621 15175 22344 12454 12732 10071 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29984000 17447 3108 16539 33103 26517 26517 1 9606 Homo sapiens -0.06273383464440485 LSHYLQK Unmodified 887.4865 0.48650199 3468 P17812;A0A3B3IRI2;B4E1E0;P17812-2 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 3 0.816 1 1 1 44.296 44.362 3 0.001928 11569 20230619_1882_Aki_TMTPro18x_K_F3 130 49.772 574980 243670 496500 538490 502630 559060 492170 484550 661210 514420 549530 464160 501240 431920 525980 525330 627220 462140 529470 226120 511150 519240 521880 561530 502140 501100 659120 517200 566420 472760 514500 451470 539930 522950 597990 440210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 321590000 17448 3468 16540 33104;33105;33106 26518 26518 1 9606 Homo sapiens 0.03825819588621471 LSIFDANESGFESYEALPQHK Unmodified 2381.1176 0.11755554 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;A0A7I2V311;A0A7I2V5F6 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 5.5 0.5 1 1 61.736 61.787 3 8.8309E-37 18913 20230619_1886_Aki_TMTPro18x_K_F6 218.79 198.17 91178 77317 95694 99652 69797 89203 89372 83771 99877 128510 109970 109210 129730 103500 101260 132860 114700 122010 84363 70959 96475 98663 75162 90854 89352 87188 101730 126860 113190 111530 130370 108540 104390 132340 109660 115970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122980000 17449 442 16541 33107;33108 26519;26520 26520 2 9606 Homo sapiens -0.01775853714798359 LSILYPATTGR Unmodified 1190.6659 0.66592292 3527 V9HWC7;P30041 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 0 5 0.816 1 1 1 56.664 56.711 2 4.141E-06 16496 20230619_1885_Aki_TMTPro18x_K_F5 188.87 132.85 506830 447220 487060 535340 582350 656460 615750 631720 645340 672180 656720 705440 691060 610980 681570 759660 709990 781890 468730 410070 498220 535000 598320 654030 619850 647990 656590 678060 675250 711390 703930 641150 695270 762020 679530 742140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13684000000 17450 3527 16542 33109;33110;33111 26521;26522 26522 2 9606 Homo sapiens 0.07821659085857391 LSIPTYGLQCTR Unmodified 1407.718 0.71803484 3606 P49327;A0A0U1RQF0;J3KTF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 4.2 0.748 1 2 2 55.954 55.991 2;3 1.7331E-05 16790 20230619_1882_Aki_TMTPro18x_K_F3 127.17 113.82 125480 124050 139050 112460 137760 153620 138130 137550 183100 110470 90395 97747 105540 96030 96449 168580 161030 149210 116290 113440 139930 115220 143260 151930 140610 140860 180140 112880 97825 99907 107000 102910 102200 166900 153370 141970 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1851299999.9999998 17451 3606 16543 33112;33113;33114;33115;33116 26523;26524;26525 26523 3 9606 Homo sapiens 0.030484544373393874 LSIQCYLSALDR Unmodified 1437.7286 0.72859953 79 Q8N995;A0A024R059;Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes no 0 0 0 3 0 1 63.419 63.45 2 0.085105 19855 20230619_1882_Aki_TMTPro18x_K_F3 55.776 30.922 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17452 79 16544 33117 26526 26526 1 9606 Homo sapiens 0.02724437091751497 LSIQNFSK Unmodified 935.50763 0.50763136 778 B4DTN0;A0A3B3IS71;A0A024RDV3;Q59HH0;P06400;B4DRB3;A0A0X9QC09 RB1 Retinoblastoma-associated protein yes no 0 0 0 3 0 1 53.737 53.79 2 0.0024793 15836 20230619_1882_Aki_TMTPro18x_K_F3 126.07 73.351 65053 56253 54823 68205 54357 73559 66464 63632 75424 66012 69133 63917 71732 57863 57878 81144 68158 78132 60095 51591 56636 67946 56963 73718 66579 65778 76049 66553 71290 64837 72459 61134 59800 80922 65183 74205 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22593000 17453 778 16545 33118 26527 26527 1 9606 Homo sapiens 0.037297848974731096 LSISDYK Unmodified 824.42798 0.42798405 4762 yes no 0 0 0 8 0 1 52.034 52.111 3 0.001768 14447 20230619_1888_Aki_TMTPro18x_K_F8 127.84 76.878 + 131850 94367 124640 131330 110850 133140 133520 121180 48579 135540 141360 156150 165910 132420 150650 196460 179220 153460 121770 86737 127060 129580 116720 134170 130820 125090 58357 136610 141920 156860 167760 140710 155280 193860 171020 146300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89743000 17454 4762 16546 33119 26528 26528 1 9606 Homo sapiens 0.008747182234742468 LSIVPVR Unmodified 782.50142 0.50142377 3457 P15880;Q6IPX5;Q3KQT6;Q8N5L9;H0YEN5;Q8J014;E9PM36;I3L404;E9PMM9;E9PPT0;Q8NI61;A4D0Y7 RPS2;rps2;OK/KNS-cl.7;LOC392781 40S ribosomal protein S2 yes no 0 0 0 3.5 0.5 1 1 49.59 49.646 2 0.0070174 13917 20230619_1882_Aki_TMTPro18x_K_F3 128.48 78.445 1090800 751680 866530 946610 954150 1239400 1109900 1055400 1422600 646650 526390 501960 664460 515860 664380 718910 711280 656300 1005900 690280 901030 943580 990870 1226100 1118700 1080000 1393600 672830 588350 517340 674020 542730 678430 715480 679710 624230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1700399999.9999998 17455 3457 16547 33120;33121 26529;26530 26529 2 9606 Homo sapiens 0.10147311456614716 LSIVPVRR Unmodified 938.60253 0.6025348 3457 P15880;Q6IPX5;Q3KQT6;Q8N5L9;H0YEN5;Q8J014;E9PM36;I3L404;E9PMM9;E9PPT0;Q8NI61;A4D0Y7 RPS2;rps2;OK/KNS-cl.7;LOC392781 40S ribosomal protein S2 yes no 0 0 1 7.5 0.5 1 1 41.873 41.907 3 0.00065082 10025 20230619_1887_Aki_TMTPro18x_K_F7 133.9 73.193 632800 677460 559560 460220 711410 745210 696300 646760 722440 112390 88062 67346 86937 66212 266380 83874 75653 62643 585700 618190 576180 487470 726300 730470 703150 653170 707370 142000 120540 70896 97391 69321 256170 83413 74138 59772 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 456180000 17456 3457 16548 33122;33123 26531;26532 26531 2 9606 Homo sapiens 0.13077763159321876 LSKDPNIVIAK Unmodified 1196.7129 0.71287311 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;B4DDM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 1 2 0 1 50.478 50.529 3 0.00042702 14666 20230619_1881_Aki_TMTPro18x_K_F2 101.38 74.411 413070 547460 708960 465460 928840 457980 876320 580420 192460 461940 606450 100140 114720 58208 1234300 52890 54483 53355 385690 499990 696870 477970 938760 468610 865480 581930 251920 461150 580250 117960 184050 61727 1163900 57061 63526 50676 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157690000 17457 2389 16549 33124 26533;26534 26533 2 9606 Homo sapiens 0.12238518637036577 LSKEDIER Unmodified 988.51892 0.51892433 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96BE0;E9PS65;Q96H53;E9PM13 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 0 1 4 0 1 40.982 41.024 2 0.011781 9974 20230619_1883_Aki_TMTPro18x_K_F4 114.19 27.855 96929 96799 147680 111350 180550 105140 156370 128890 56239 121360 149570 37540 37006 21944 198030 12352 15852 10417 90139 88690 145960 111320 183130 107630 156090 129860 66847 120270 143710 41606 48646 22774 187460 13071 16890 9934.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100580000 17458 3430 16550 33125 26535 26535 1 9606 Homo sapiens 0.024205622009503713 LSKEEIER Unmodified 1002.5346 0.53457439 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNX1;B4E1T6 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B no no 0 0 1 3.5 0.5 1 1 40.231 40.28 3 0.070242 9650 20230619_1883_Aki_TMTPro18x_K_F4 70.17 21.53 232780 197040 269880 297110 514650 378800 425220 392420 322260 282710 340160 154100 164100 111740 417630 82663 112660 54078 215580 181160 274750 292780 510830 377500 430560 396930 334710 287590 339720 161230 184510 115330 401520 83092 110340 51882 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290810000 17459 1031 16551 33126;33127 26536 26536 1 9606 Homo sapiens 0.033408487179940494 LSKPCCYIFPGGR Unmodified 1553.7483 0.74828911 630;2915 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6;E9PGC8;P78559;P78559-2;A8K4T7;Q7Z5F9;Q504X9 MAP1B;MAP1A Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1;Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 no no 0 0 1 6.5 0.5 1 1 52.067 52.143 3 0.08801 14851 20230619_1886_Aki_TMTPro18x_K_F6 41.621 12.148 125800 125300 156340 131540 130560 104300 145420 133510 87242 108050 127620 66530 60009 47945 184110 53759 47537 50560 116720 114710 155680 132150 137470 108380 144100 133750 93783 109160 125930 68945 69081 50431 176780 54180 46824 48045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147960000 17460 630;2915 16552 33128;33129 26537 26537 1 9606 Homo sapiens -0.0064351016915225046 LSLDELHR Unmodified 981.52434 0.52434406 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2;Q5TC01;Q5TC02 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 4.5 0.5 1 1 45.147 45.208 3 2.8501E-07 11791 20230619_1883_Aki_TMTPro18x_K_F4 200.16 141.24 117770 95928 106880 145180 141020 188630 178010 170940 209590 180210 183450 194280 193320 173660 170030 205520 182560 217140 108810 88213 110320 143000 145070 186870 178170 176080 210600 182140 189940 195890 195960 181480 174210 206570 174790 205990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 461910000 17461 3387 16553 33130;33131 26538;26539 26538 2 9606 Homo sapiens 0.03284285783411178 LSLDELHRK Unmodified 1109.6193 0.61930707 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2;Q5TC01;Q5TC02 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 1 7.5 0.5 1 1 42.935 42.979 4 3.9661E-06 10708 20230619_1888_Aki_TMTPro18x_K_F8 156.92 84.274 98974 96138 89150 111610 137690 135900 135830 149460 154170 139610 144090 141410 155790 123340 129150 184160 165890 157740 91551 88099 92248 111770 139030 135930 137590 151400 155630 141660 148780 143000 157350 131040 134120 182430 158310 150130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196370000 17462 3387 16554 33132;33133 26540 26540 1 9606 Homo sapiens 0.06888219254597061 LSLDGQNIYNACCTLR Unmodified 1896.8822 0.88221641 1159;1980 P26599;P26599-2;A0A0U1RRM4;P26599-1;A0A7I2V621;A0A7I2V4H6;A0A6Q8PEX4;K7EK45;Q59H49;A0A087WU68;A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 no no 0 0 0 3.67 3.09 1 1 1 56.885 56.91 2;3 1.5452E-26 17187 20230619_1880_Aki_TMTPro18x_K_F1 240.24 229.29 188310 171620 186260 192140 189100 199270 205890 198330 205810 224640 203960 203190 234120 188690 205990 263900 251100 243460 174230 157250 189450 192530 196530 201030 206660 203400 209810 224930 210690 206850 236640 199140 212770 262660 239770 231480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 648780000 17463 1159;1980 16555 33134;33135;33136 26541;26542;26543 26541 3 9606 Homo sapiens -0.030349409248628945 LSLEEFIR Unmodified 1005.5495 0.54949617 3561;2294 P61601;B2RB70;Q5U068;Q6FGY1;P37235;P84074;O75544 NCALD;HPCAL1;HPCA Neurocalcin-delta;Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin no no 0 0 0 6.5 0.5 1 1 62.071 62.115 2 0.0019869 19054 20230619_1886_Aki_TMTPro18x_K_F6 133.9 98.801 977400 856580 946800 936730 929520 1143100 1194800 1223700 1391000 1151900 1218700 1319600 1332100 1188000 1427500 1436500 1385300 1634500 903950 784800 964360 942730 975080 1141900 1195300 1242300 1398300 1173400 1264700 1327900 1360900 1242900 1447700 1450600 1327500 1549400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 713150000 17464 2294;3561 16556 33137;33138 26544;26545 26544 2 9606 Homo sapiens 0.046943405859906306 LSLEGDHSTPPSAYGSVK Unmodified 1843.8952 0.89520716 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;A6NMY6;H0YMU9;B4DNH8;H0YNB8;H0YKS4;A0A7I2V4P4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YMD9;H0YKN4 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 7 0.816 1 1 1 48.091 48.166 3 6.5054E-07 13081 20230619_1886_Aki_TMTPro18x_K_F6 114.56 101.52 265370 220870 265390 319070 326620 391510 291530 282520 206270 330200 329420 436120 321730 264170 283050 316280 384630 538890 245410 202980 270860 314810 333480 387730 293540 297570 220520 334010 332620 431520 326740 281280 294340 329240 368100 508920 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 422170000 17465 368 16557 33139;33140;33141 26546;26547;26548;26549;26550 26547 5 9606 Homo sapiens 0.007015367305257314 LSLEQALPPEPK Unmodified 1320.7289 0.7289171 2145 A8K9X5;Q9UNN5;Q9UNN5-2;B4DEJ6;B3KT28 FAF1 FAS-associated factor 1 yes no 0 0 0 5.5 0.5 1 1 57.253 57.318 3 0.016813 16952 20230619_1886_Aki_TMTPro18x_K_F6 62.088 38.483 40391 32077 41200 46104 35222 41692 46353 40415 53464 46689 51269 44989 49613 41410 41689 51929 49387 53353 37348 29482 41732 45332 37380 42449 46302 41578 53940 46819 52581 45661 50312 43401 43015 52062 47206 50645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90895000 17466 2145 16558 33142;33143 26551 26551 1 9606 Homo sapiens 0.08138180083278712 LSLNIDPDAK Unmodified 1084.5764 0.57643921 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A7P0T917;B4DU71;B4DHT9 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 5 0 1 56.482 56.543 2 0.0054614 16475 20230619_1885_Aki_TMTPro18x_K_F5 100.88 48.195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17467 3452 16559 33144 26552 26552 1 9606 Homo sapiens 0.03753404406506888 LSLQESESK Unmodified 1019.5135 0.5135046 2814 D3DS96;Q9NRL2-2;Q9NRL2;Q59G54;B3KND8 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 0 0 0 4 0 1 45.366 45.41 2 0.00010382 11923 20230619_1883_Aki_TMTPro18x_K_F4 170.47 156.31 55407 37756 46209 56816 56489 57856 57951 49959 62976 66546 75207 66768 79149 67204 58482 59748 79471 72014 51109 34743 47920 55782 57888 58242 58488 52064 64378 66390 76676 67782 79677 68941 60990 60857 75782 68297 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32886000 17468 2814 16560 33145 26553 26553 1 9606 Homo sapiens 0.004528386184915689 LSLSEGGLVPSSK Unmodified 1272.6925 0.6925316 2420 B3KUH0;Q8WUX9;B3KMN6;B3KRZ9 CHMP7 Charged multivesicular body protein 7 yes no 0 0 0 1 0 1 56.015 56.015 3 0.00093106 16843 20230619_1880_Aki_TMTPro18x_K_F1 95.417 72.538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17469 2420 16561 33146 26554 26554 1 9606 Homo sapiens 0.06709303186562465 LSLSNAISTALPLTQLR Unmodified 1797.036 0.035998161 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 7 0 1 64.528 64.558 3 1.3914E-06 19887 20230619_1887_Aki_TMTPro18x_K_F7 113.47 92.227 50719 0 24622 19221 34290 29256 48140 19061 0 46236 43132 23472 31480 30752 0 30544 34766 44846 46406 0 27299 17925 35099 28574 46204 20961 0 44507 41545 25131 31036 31508 0 31395 32998 42406 1 0 1 1 1 1 1 1 0 1 1 1 1 1 0 1 1 1 267620000 17470 3881 16562 33147 26555 26555 1 9606 Homo sapiens 0.16936160174600445 LSLYSETDSGYGSYTPSLK Unmodified 2066.9684 0.96843169 2992 F8W8C1;Q6ZTA4;Q6ZTA4-2 TRIM67 Tripartite motif-containing protein 67 yes no 0 0 0 7.5 0.5 1 1 61.295 61.331 3 1.5647E-24 18310 20230619_1888_Aki_TMTPro18x_K_F8 195.15 179.21 111850 94948 112990 113850 90612 113820 112240 114730 126720 160120 159770 183280 172760 152120 175100 178590 174610 193720 103450 87076 114360 113460 96584 115110 112450 118370 129750 160010 163140 183850 176040 159330 178010 179890 167210 183760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 415720000 17471 2992 16563 33148;33149 26556;26557 26557 2 9606 Homo sapiens -0.02237379337520906 LSMKPEPLFR Oxidation (M) 1232.6587 0.65872905 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 1 1 3 0 1 47.656 47.735 3 0.08845 13116 20230619_1882_Aki_TMTPro18x_K_F3 46.033 35.16 579560 463760 479510 600960 573980 556520 570480 545290 603750 619540 699510 676800 657450 585690 739000 762000 714130 763560 535060 425740 497460 594850 588240 566100 576490 560130 617080 623830 711460 681750 676320 616330 748820 762920 683850 725040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1094600000 17472 630 16564 33150 26558 26558 371 1 9606 Homo sapiens 0.05170603213787217 LSMKPEPLFR Unmodified 1216.6638 0.66381443 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 1 3 0 1 52.658 52.718 3 0.00097071 15354 20230619_1882_Aki_TMTPro18x_K_F3 96.015 68.534 284910 236880 245460 282740 229670 278980 257090 271740 247030 315220 307380 332210 311360 281550 336370 330670 326100 323780 263170 217240 252620 281730 240780 282210 257510 279290 254980 316570 313000 334640 318910 294590 341010 331180 312090 307610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 356730000 17473 630 16564 33151 26559 26559 1 9606 Homo sapiens 0.06414907076418785 LSMSQLNEK Oxidation (M) 1064.5172 0.51720977 3811 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 1 0 6.5 0.5 1 1 42.683 42.767 2 0.0016473 10687 20230619_1886_Aki_TMTPro18x_K_F6 109.02 75.47 45956 29469 40075 48902 48501 66427 48831 55039 79979 57980 65587 87206 84033 72435 53985 89470 104340 103060 42392 27159 41396 47966 49901 65510 50168 57081 79082 59387 68874 86677 83828 76099 58394 90278 99335 97745 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55180000 17474 3811 16565 33152;33153 26560 26560 2491 1 9606 Homo sapiens -0.012468148793232103 LSMSQLNEK Unmodified 1048.5223 0.52229515 3811 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 7.33 0.471 2 1 49.571 49.651 2;3 2.616E-06 13433 20230619_1887_Aki_TMTPro18x_K_F7 209.6 97.652 349170 247450 301170 376870 301410 461410 364990 374540 571060 463580 465580 574070 627960 547020 383500 811420 770700 826150 322230 227690 310570 370710 316310 457650 370560 391040 565710 467550 490120 577180 624790 579040 418020 810500 734040 784320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 326830000 17475 3811 16565 33154;33155;33156 26561;26562;26563 26562 3 9606 Homo sapiens -2.511016714379366E-05 LSMWDRPDDLIGR Oxidation (M) 1588.7668 0.76677595 1699 A0A7P0T8N8;O14776-2;O14776;G3V220;B7Z921 TCERG1 Transcription elongation regulator 1 yes no 0 1 1 5.5 0.5 1 1 53.005 53.08 3 8.5708E-05 15207 20230619_1886_Aki_TMTPro18x_K_F6 112.02 100.33 104620 112820 113120 122490 128030 113660 126390 120550 109110 117420 123750 113380 114300 103330 125580 124050 112440 122340 96997 103290 114460 122840 131450 115890 127040 122640 112780 118670 125850 115010 117500 107990 126780 124250 107780 116190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195860000 17476 1699 16566 33157;33158 26564 26564 1105 1 9606 Homo sapiens -0.0040567699356870435 LSMWDRPDDLIGR Unmodified 1572.7719 0.77186132 1699 A0A7P0T8N8;O14776-2;O14776;G3V220;B7Z921 TCERG1 Transcription elongation regulator 1 yes no 0 0 1 7 0 1 57.149 57.204 3 8.6488E-11 16636 20230619_1887_Aki_TMTPro18x_K_F7 184.21 132.48 89736 79640 91384 93545 72287 101120 100300 99208 107130 108010 93716 91791 120150 99210 103990 118960 104030 114370 83033 73011 92455 93452 77501 101590 99737 101710 108270 108210 97940 94204 120990 103170 106110 118930 99605 108640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63223000 17477 1699 16566 33159 26565 26565 1 9606 Homo sapiens 0.008386268690401266 LSNIFVIGK Unmodified 989.59097 0.59096706 2202 Q96IR1;B2R491;P62701;Q53HV1 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform yes no 0 0 0 4.8 0.748 2 2 1 62.432 62.463 2;3 0.00063263 18976 20230619_1885_Aki_TMTPro18x_K_F5 108.3 90.394 1378400 1203200 1253500 1261400 1254500 1466800 1526600 1442900 1630500 1741600 1458500 1530300 1681800 1304700 1471000 1736600 1749100 1692000 1274100 1102000 1284000 1272600 1311100 1467500 1526400 1483500 1649800 1737400 1514900 1554900 1698900 1376900 1516200 1734800 1670400 1607800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3792999999.9999995 17478 2202 16567 33160;33161;33162;33163;33164 26566;26567 26567 2 9606 Homo sapiens 0.09575521345323068 LSNKVEAIDVEEAK Unmodified 1543.8094 0.80935227 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57 MCM4 DNA replication licensing factor MCM4 yes no 0 0 1 4 1.41 1 1 1 1 1 51.983 52.039 3 1.0265E-06 14935 20230619_1883_Aki_TMTPro18x_K_F4 130.27 103.74 164070 127180 159260 155140 127220 145390 158040 153550 153590 208860 213830 182990 196130 156970 175010 175080 160810 150690 151620 116690 161670 154310 135510 147960 157550 157790 159310 207200 215550 186050 199580 163770 177550 174330 153930 143420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1025699999.9999999 17479 471 16568 33165;33166;33167;33168;33169 26568 26568 1 9606 Homo sapiens 0.059199966156711525 LSNLALVKPEK Unmodified 1210.7285 0.72852317 3221 O14737;O14737-2;K7EQA1 PDCD5 Programmed cell death protein 5 yes no 0 0 1 3 0 1 53.446 53.499 3 0.002802 15715 20230619_1882_Aki_TMTPro18x_K_F3 80.469 66.797 679220 598810 638360 746130 692650 747760 708500 728050 783360 816220 852210 804530 862530 756670 767460 954490 843420 870060 628050 549300 653290 741320 715580 755670 716010 747560 796860 819790 871210 816110 875620 792360 787340 950760 806430 827190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 244480000 17480 3221 16569 33170 26569 26569 1 9606 Homo sapiens 0.13158805154080255 LSNLMTAK Unmodified 876.47389 0.47388839 1835 A0A8V8TN35;O95470 SGPL1 Sphingosine-1-phosphate lyase 1 yes no 0 0 0 3 0 1 52.918 52.977 2 0.038094 15466 20230619_1882_Aki_TMTPro18x_K_F3 79.986 29.131 75222 55174 67689 68535 70486 76966 73560 71202 89257 59564 60600 56320 56585 46603 69179 64878 66984 57501 69453 50646 69430 68232 73111 77057 74463 72839 88809 60781 63352 57036 58483 49359 69976 64507 64045 54728 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29401000 17481 1835 16570 33171 26570 26570 1 9606 Homo sapiens 0.03071040134057057 LSNNYYCTR Unmodified 1189.5186 0.51860675 3346 Q6FG42;Q32Q14;O95182;Q6IB89 NDUFA7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes no 0 0 0 1 0 1 40.924 40.924 2 0.0018056 10491 20230619_1880_Aki_TMTPro18x_K_F1 112.36 67.98 65834 49665 57377 71903 103020 122490 94137 90118 103440 43667 52899 36270 57521 48343 53788 59321 65912 48285 60780 45660 59792 71367 103250 119210 95622 93034 102660 46556 56757 37720 58421 50046 55452 58807 62825 46043 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52703000 17482 3346 16571 33172 26571 26571 1 9606 Homo sapiens -0.06857180790575512 LSNRPAFMPSEGR Unmodified 1460.7194 0.71943182 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4 ACTN1 Alpha-actinin-1 yes no 0 0 1 2.5 0.5 1 1 42.504 42.577 3 9.6393E-05 10717 20230619_1882_Aki_TMTPro18x_K_F3 107.53 92.531 260680 175370 220850 217490 200270 229310 248940 250650 287830 240050 227180 203060 226110 179130 240890 249550 255260 173020 240470 161030 227340 216420 211160 231440 249380 254260 288480 242090 235800 207160 231470 189250 245510 245380 243520 165450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 461370000 17483 387 16572 33173;33174 26572 26572 1 9606 Homo sapiens 0.007500885260697032 LSNSDSQDIQGR Unmodified 1318.6113 0.61132116 681 A0A024RBK4;O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 yes no 0 0 0 2 0 1 36.469 36.527 2 0.0003404 8302 20230619_1881_Aki_TMTPro18x_K_F2 111.63 94.157 7061 4103.2 9862.1 8672 11014 17474 9542.8 11659 12741 8340.3 15640 18364 13004 11299 11187 7604.8 13662 14679 6538.8 3797.3 9801.6 8485.6 11351 16841 9816.9 12216 12886 8918.6 15808 17933 13269 11693 11524 8111.5 13054 13864 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7271600 17484 681 16573 33175 26573 26573 1 9606 Homo sapiens -0.035240045235013895 LSNTGEYESQR Unmodified 1282.579 0.5789584 4231 Q8N490-2 yes yes 0 0 0 2.5 0.5 1 1 36.997 37.054 2 0.00012451 8533 20230619_1881_Aki_TMTPro18x_K_F2 135.8 107.59 37711 23286 39556 49916 55614 63288 59273 58395 70465 49214 71509 83302 60779 61168 59579 37614 81455 82858 34831 21549 40349 48327 56612 62806 59872 59764 71076 51295 72927 82175 62397 62584 61684 40786 77734 78214 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64396000 17485 4231 16574 33176;33177 26574;26575 26574 2 9606 Homo sapiens -0.05102791926469763 LSNVNLQEK Unmodified 1043.5611 0.56112349 4730 Q9Y3T9;B3KNC3;Q9H9J5 NOC2L Nucleolar complex protein 2 homolog yes no 0 0 0 7 0 1 47.674 47.762 2 0.0019782 12539 20230619_1887_Aki_TMTPro18x_K_F7 127.37 61.906 193570 140080 158440 180870 223550 288100 195190 190290 322950 203880 223270 222840 258520 219630 189470 278940 301300 275440 178590 128640 165030 180560 226980 280800 202240 201480 317470 206330 235170 225430 259640 229790 200530 278880 287020 261740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253820000 17486 4730 16575 33178 26576 26576 1 9606 Homo sapiens 0.04108537609317864 LSPADDELYQR Unmodified 1305.6201 0.62009493 4436 Q9BU61 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 0 0 0 2 0 1 47.5 47.576 2 1.8619E-12 13320 20230619_1881_Aki_TMTPro18x_K_F2 214.05 166.4 96508 86303 102720 100520 91400 108680 117340 108070 140550 145490 133780 130250 150230 116380 115850 155970 140550 125900 89338 79111 103670 100490 96593 109270 117510 111450 141660 144570 138230 132460 151120 122620 119990 154300 134130 119950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109160000 17487 4436 16576 33179 26577 26577 1 9606 Homo sapiens -0.02049030887042136 LSPAQGPPQPQSSAK Unmodified 1491.7682 0.76815616 429 A0A804HI90;A0A024R751;A0A804HKV2;A0A804HHS8;C9J1X0;A4D1P6-3;A4D1P6-2;A4D1P6 HSPC049;WDR91 WD repeat-containing protein 91 yes no 0 0 0 8 0 2 42.598 42.601 3 0.00044459 10556 20230619_1888_Aki_TMTPro18x_K_F8 87.148 67.31 22000 13128 21429 19763 18903 23178 23000 20733 27919 21985 27483 27681 24982 24390 26357 26739 27247 26222 20304 12088 21771 19455 19970 23109 23104 21393 28113 22342 28114 27738 25663 25371 26829 26807 26054 24915 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18630000 17488 429 16577 33180;33181 26578;26579 26578 2 9606 Homo sapiens 0.04194280366846215 LSPDAIPGK Unmodified 896.49673 0.49673232 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 7 0.816 1 1 1 49.976 50.054 2 0.00058315 13591 20230619_1887_Aki_TMTPro18x_K_F7 147.19 114.58 489190 384260 433690 412650 379710 361200 396950 415570 484960 609850 662730 594960 620920 520120 522690 755720 648680 585020 451800 352150 444070 414100 398970 370810 402370 425960 496570 605180 669120 602630 630350 551200 541490 745410 618990 557700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 790800000 17489 3606 16578 33182;33183;33184 26580;26581 26580 2 9606 Homo sapiens 0.04434382523197655 LSPEDYTLK Unmodified 1064.539 0.53899107 1270 F8W787;A0A1B0GW44;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;V9HWI3;C9JH19;P07339;A0A1B0GVP3;A0A1B0GU92;A0A1B0GU03;H7C469;A0A0S2Z3L4;A0A1B0GVF1 CTSD;HEL-S-130P Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 0 0 0 6 0 1 54.314 54.391 3 0.00014508 15764 20230619_1886_Aki_TMTPro18x_K_F6 133.13 26.711 55223 39647 57122 68655 69416 76689 82517 89401 100220 73140 72401 79476 79768 69191 68908 85194 74080 84187 51038 36542 58143 67012 71489 77170 82955 89985 99914 75010 75959 80058 80688 72546 70642 85252 70899 79935 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191750000 17490 1270 16579 33185 26582 26582 1 9606 Homo sapiens 0.009303131409069465 LSPEEVQK Unmodified 928.48656 0.48656157 974 P57737-3;A0A0A6YYL4;Q9Y3D7;I3L1U7;I3L0X9;I3L3T0 CORO7;CORO7-PAM16;PAM16 Coronin-7;Coronin;Mitochondrial import inner membrane translocase subunit TIM16 yes no 0 0 0 3 0 1 44.781 44.853 2 0.0091476 11762 20230619_1882_Aki_TMTPro18x_K_F3 107.01 28.859 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17491 974 16580 33186 26583 26583 1 9606 Homo sapiens 0.01945774797957256 LSPELLNTGR Unmodified 1098.6033 0.60332266 2017 Q68E10;E9PB90;A8K2U2;P52789;Q53SG7;Q7Z7Q6 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 yes no 0 0 0 8 0 1 51.436 51.513 2 0.00021732 14158 20230619_1888_Aki_TMTPro18x_K_F8 136.99 80.479 190640 157440 174980 194910 195510 238000 195410 186400 225380 284270 271210 299220 277010 246110 272060 296510 283450 311820 176170 144450 179500 194260 201700 236180 198000 196620 230070 282440 276580 301090 282350 258260 277510 297950 271290 295910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105480000 17492 2017 16581 33187 26584 26584 1 9606 Homo sapiens 0.05796513017708094 LSPLAQELR Unmodified 1025.5869 0.58694431 2781 CON__P15497 yes yes 0 0 0 7 0.816 1 1 1 51.172 51.25 2 0.00015773 14134 20230619_1887_Aki_TMTPro18x_K_F7 146.23 98.488 + 213310 399140 483290 229290 627490 773670 607420 597800 861810 499150 713290 816980 365670 445630 884280 439210 593560 740040 200890 363460 469400 253610 640130 737170 621190 619610 855770 520010 725090 801700 409610 471140 871640 459710 571740 699160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 590980000 17493 2781 16582 33188;33189;33190 26585;26586 26586 2 0.07517431851601941 LSPNAWK Unmodified 814.43374 0.43373813 569 A0A024R9D7;Q16698-2;Q16698;E5RJG7;Q7LDK6;E5RFV2;E5RJD2 DECR1;DECR 2,4-dienoyl-CoA reductase, mitochondrial yes no 0 0 0 2.5 0.5 1 1 50.67 50.731 2 0.020718 14433 20230619_1882_Aki_TMTPro18x_K_F3 104.21 68.591 321480 273210 301020 335390 414400 427120 439750 417960 517760 323150 338060 310600 362150 268440 357260 328600 375080 340580 297180 250610 309450 334790 422010 424760 443980 425050 515300 331650 356240 314660 368450 281710 364170 330020 358460 323490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 375030000 17494 569 16583 33191;33192 26587 26587 1 9606 Homo sapiens 0.019098615258030804 LSPPFKPQVTSETDTR Unmodified 1801.921 0.92102798 1735 P31749;A0A804HJM6;B0LPE5;B3KVH4;P31749-2;G3V2I6;Q9BV07;B3KXD7;G3V3X1 AKT1 RAC-alpha serine/threonine-protein kinase yes no 0 0 1 1 0 1 49.294 49.294 3 0.00050626 14060 20230619_1880_Aki_TMTPro18x_K_F1 83.253 60.932 39782 36808 40957 36658 38855 39248 43904 49178 46100 39167 42463 42723 42142 34262 41368 43756 42195 45778 36824 33691 41447 37118 40623 39745 44067 49263 46672 40214 43734 42941 42974 36132 42140 43924 40389 43446 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24973000 17495 1735 16584 33193 26588 26588 1 9606 Homo sapiens 0.052144309727964355 LSPPYSSPQEFAQDVGR Unmodified 1876.8955 0.89554151 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 6.5 0.5 2 2 57.293 57.357 2;3 1.9003999999999997E-19 16982 20230619_1886_Aki_TMTPro18x_K_F6 192.78 170.94 120100 104510 111010 126380 123230 131150 148480 142620 172190 150870 163420 173080 167090 154810 175840 184150 159890 187340 111030 95842 113820 125910 127700 132540 148930 145160 173650 152740 168360 174110 170900 161780 177830 184740 153330 177800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 992110000 17496 2263 16585 33194;33195;33196;33197 26589;26590;26591 26589 3 9606 Homo sapiens -0.007830435496316568 LSPQAVNSIAK Unmodified 1126.6346 0.63462279 2734 C9J0K6;P30626-2;P30626;P30626-3 SRI Sorcin yes no 0 0 0 2 0 1 50.226 50.278 2 1.8568E-08 14594 20230619_1881_Aki_TMTPro18x_K_F2 204.56 111.36 102650 74264 81373 88480 119950 124180 104510 98397 118180 107070 97940 144680 136480 111760 104460 135200 150330 179930 94686 68146 85042 88637 121130 122300 106640 102550 118900 108910 103430 143910 136590 117670 109490 137870 143590 170320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121980000 17497 2734 16586 33198 26592 26592 1 9606 Homo sapiens 0.0763708605179545 LSPQMQVHQDK Unmodified 1309.6449 0.6448699 1361 E7ETD6;E9PE19;A0A2R8Y7Q1;J3QQK4;Q12830-4;Q12830-2;Q12830;F5GXF5;J3KSK9;B4DJV8 BPTF Nucleosome-remodeling factor subunit BPTF yes no 0 0 0 7 0 1 40.251 40.316 3 0.00014641 9379 20230619_1887_Aki_TMTPro18x_K_F7 111.79 86.319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17498 1361 16587 33199 26593 26593 1 9606 Homo sapiens 0.0024332571472314157 LSPSGTGPTPR Unmodified 1068.5564 0.55637247 2419 B3KUG0;Q9UF94;H3BQH3;Q9H863;Q8TBB5-2;Q8TBB5-3;Q8TBB5 DKFZp434G0522;KLHDC4 Kelch domain-containing protein 4 yes no 0 0 0 8 0 1 36.707 36.694 2 0.0023619 8184 20230619_1888_Aki_TMTPro18x_K_F8 94.087 68.193 29212 20032 30886 31065 32221 30681 30004 28624 34563 28410 40087 38148 35094 31984 35191 30760 43676 33577 26997 18440 31247 30449 33264 31009 30536 29399 35135 29032 40639 38084 36000 33116 36221 31111 41637 31899 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15598000 17499 2419 16588 33200 26594 26594 1 9606 Homo sapiens 0.02483653466561009 LSPSPSSR Unmodified 829.42938 0.42938104 3482;1473 P20700;B4DZT3;Q03252;A0A384NPH0;A0A0A7M1X5 LMNB1;LMNB2 Lamin-B1;Lamin-B2 no no 0 0 0 6 1.41 1 1 1 1 1 32.699 32.752 2 0.0017128 6380 20230619_1887_Aki_TMTPro18x_K_F7 138.26 91.426 243710 129900 297450 270870 382140 400830 277470 328590 297910 220160 343570 383450 260100 274290 367000 145550 373820 319940 225270 120250 298710 263420 387130 393540 286800 337650 303800 233340 347180 377790 273520 279620 370410 158870 357230 302230 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 309980000 17500 3482;1473 16589 33201;33202;33203;33204;33205 26595;26596;26597 26596 3 9606 Homo sapiens 0.007843523122346596 LSPSPTSQR Unmodified 971.50361 0.50360861 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;B4DFR3 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 6.5 1.12 1 1 1 1 33.911 33.963 2 4.2674E-06 7034 20230619_1888_Aki_TMTPro18x_K_F8 185.55 130.76 120080 63814 135880 157550 278820 307920 224810 275910 283110 103060 175200 199130 149990 136810 228340 72055 190430 172210 110910 59255 139050 153120 276890 298910 231510 279190 280150 116610 184050 195600 157670 139790 227830 79585 182440 162570 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 544380000 17501 1428 16590 33206;33207;33208;33209 26598;26599;26600;26601 26601 4 9606 Homo sapiens 0.016716954037519827 LSPTPEQTR Unmodified 1027.5298 0.52982336 2784 CON__P28800 yes yes 0 0 0 4 0 1 35.798 35.845 2 0.00035634 7868 20230619_1883_Aki_TMTPro18x_K_F4 109.48 77.258 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17502 2784 16591 33210 26602 26602 1 0.01715964575214457 LSPVPVPR Unmodified 863.52289 0.52288749 2053 Q5QPL9;A8K4T9;Q53GL6;Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1 RALY RNA-binding protein Raly yes no 0 0 0 2 0.816 1 1 1 46.19 46.242 2 0.03054 12690 20230619_1881_Aki_TMTPro18x_K_F2 79.597 51.085 326870 253060 358700 317510 299910 367930 373760 344900 407220 366470 426490 414200 450790 315570 387740 403840 438480 394860 302390 232270 360660 316140 318340 367600 373690 354610 413510 370700 437610 415080 455850 333700 398250 403880 418740 375290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 307020000 17503 2053 16592 33211;33212;33213 26603 26603 1 9606 Homo sapiens 0.08566696485320335 LSPWIRPDSK Unmodified 1197.6506 0.6506072 3222 O14744;O14744-2;O14744-4;G3V580;G3V5L5;G3V2L6;C9JSX3;G3V2X6 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed yes no 0 0 1 3.5 0.5 1 1 49.788 49.843 3 0.032949 14097 20230619_1882_Aki_TMTPro18x_K_F3 59.418 28.045 534460 464120 576080 575120 563550 653720 609500 592480 696410 661260 683810 668450 735570 610490 693790 736580 712680 746850 494710 425750 581580 572760 587790 653620 614700 611400 704090 664980 704410 676480 746990 638440 707510 738640 681940 709130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 522270000 17504 3222 16593 33214;33215 26604;26605 26604 2 9606 Homo sapiens 0.059687922886723754 LSQECPIK Unmodified 973.49027 0.49026674 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;B5MCE7;Q75MG1;E9PFD4 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 0 5.5 0.5 1 1 44.339 44.431 2 0.0015637 11403 20230619_1886_Aki_TMTPro18x_K_F6 140.63 14.067 134070 87441 121050 108970 135560 164380 136680 143680 185230 155010 158220 154680 193640 156470 123690 145310 212570 189140 123710 80310 124210 109030 139930 161490 139250 148420 184840 156160 165020 157070 193230 160890 132000 148600 202360 179270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126730000 17505 607 16594 33216;33217 26606;26607 26607 2 9606 Homo sapiens 0.0024612130016521405 LSQEDPDYGIR Unmodified 1291.6044 0.60444487 1490 B4DWK8;A0A384P5Q0;P04040 CAT Catalase yes no 0 0 0 2 0 1 45.646 45.728 2 0.0088824 12453 20230619_1881_Aki_TMTPro18x_K_F2 82.494 65.109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17506 1490 16595 33218 26608 26608 1 9606 Homo sapiens -0.029693174040630765 LSQEEILGSTR Unmodified 1231.6408 0.64083038 740 A0A024RCZ8;Q9NSK0;Q9NSK0-3;Q9NSK0-5;C9J8T5;Q9NSK0-4;C9JXT5;C9JQU1;C9K0D5;Q9NSK0-2 KLC4 Kinesin light chain 4 yes no 0 0 0 4 0 1 48.112 48.152 2 0.00011112 13139 20230619_1883_Aki_TMTPro18x_K_F4 136.96 108.26 58707 47555 49616 61689 53091 69096 65025 63787 78130 68224 85659 84639 73884 68600 73656 77937 85698 95618 54212 43655 51303 61209 55312 69150 65268 65666 79074 69229 87009 84650 75815 71777 75595 79145 81947 90595 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63821000 17507 740 16596 33219 26609 26609 1 9606 Homo sapiens 0.0342755949268394 LSQEEYER Unmodified 1052.4775 0.47745344 4038 Q5JRA6-2;Q5JRA6;Q5JRA6-4 MIA3 Melanoma inhibitory activity protein 3 yes no 0 0 0 1 0 1 37.483 37.483 2 0.02366 8965 20230619_1880_Aki_TMTPro18x_K_F1 85.744 9.399 31534 21111 30221 35589 32000 41790 34634 38754 49880 37257 37448 44385 44737 38253 39684 39643 52689 55776 29115 19456 30877 34802 33251 41676 35239 39751 49427 37978 39369 44501 45211 39758 41157 40715 50308 52794 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52886000 17508 4038 16597 33220 26610 26610 1 9606 Homo sapiens -0.04668618558389426 LSQETEALGR Unmodified 1102.5619 0.56185177 2110 Q53GX6;A8K7Q1;Q02818;B4DZX0;Q96BA4;B3KUR6 NUCB1 Nucleobindin-1 yes no 0 0 0 3 0 1 42.909 42.975 2 0.00041111 10891 20230619_1882_Aki_TMTPro18x_K_F3 151.22 103.4 138090 101940 121700 133340 166570 179020 170310 163320 209300 156880 197720 177370 179890 159730 160450 177320 202870 179260 127480 93624 125750 132640 169620 177180 172630 167740 210320 159640 202460 178660 183330 166240 165920 177990 193540 170330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181020000 17509 2110 16598 33221 26611 26611 1 9606 Homo sapiens 0.014673322583803383 LSQGVTLVVDR Unmodified 1185.6717 0.67173657 3498 Q6FGU2;P23919;Q53F55;P23919-2;H7BZ20 DTYMK Thymidylate kinase yes no 0 0 0 7.5 0.5 1 1 52.271 52.346 2 1.139E-08 14548 20230619_1888_Aki_TMTPro18x_K_F8 197.73 162.44 642870 516000 609110 570790 524270 648640 644740 629670 685060 621910 603620 569300 588720 503260 614180 615370 604990 568090 594110 472960 620140 573310 555100 649530 644470 644350 692240 627420 622450 578230 602570 527220 623590 614010 578690 540210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 642290000 17510 3498 16599 33222;33223 26612;26613 26613 2 9606 Homo sapiens 0.08632757597570162 LSQIGVENTEENRR Unmodified 1643.8227 0.82271092 26 A0A024QZ64;P09972;B7Z1Y2;B7Z3K9;B7Z1N6;B7Z3K7;A8MVZ9;C9J8F3;J3KSV6;J3QKP5;J3QKK1;B7Z1H6;K7EKH5 ALDOC Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C yes no 0 0 1 4 0 1 39.586 39.628 3 0.088363 9401 20230619_1883_Aki_TMTPro18x_K_F4 44.13 22.758 25922 14937 35779 35860 48547 40468 39191 45432 43279 31155 45807 48660 36536 41442 47391 25312 58636 45241 24001 13856 35701 34526 49034 40674 40210 45676 43905 32790 46516 48332 38183 42103 48488 26892 55901 42808 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52267000 17511 26 16600 33224 26614 26614 1 9606 Homo sapiens 0.02655247447637521 LSQLEGVNVER Unmodified 1242.6568 0.65681479 4389 Q96QK1;Q53FR4;Q5HYM2 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 4.5 0.5 1 1 49.737 49.792 2 6.6477E-12 13859 20230619_1883_Aki_TMTPro18x_K_F4 202.31 145.5 128170 114480 129840 128370 134210 143280 143390 137130 158540 165650 170730 173310 199470 159620 158420 193820 184470 194450 118600 104900 131810 128750 139260 143670 144540 141300 161230 166120 175840 175160 200660 166960 163450 194150 176320 184640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 583190000 17512 4389 16601 33225;33226 26615 26615 1 9606 Homo sapiens 0.04519265729572908 LSQMILDK Unmodified 946.51575 0.5157532 3207 O00231;O00231-2 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 4.5 3.5 1 1 58.078 58.124 2;3 0.015432 17052 20230619_1888_Aki_TMTPro18x_K_F8 99.815 5.1526 90912 69110 74179 94042 68347 104340 80035 80372 108400 89836 88299 104660 104690 93596 75675 136240 124210 124410 83899 63491 76808 92987 72095 104080 80893 84052 108000 90808 92330 105240 105060 99113 80477 135360 118380 118290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27196000 17513 3207 16602 33227;33228 26616;26617 26617 2 9606 Homo sapiens 0.04035595822585947 LSQNNFALGYK Unmodified 1253.6404 0.64043645 4704 Q9Y277;Q9Y277-2 VDAC3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 3.5 0.5 1 1 54.672 54.703 3 0.0023536 16216 20230619_1882_Aki_TMTPro18x_K_F3 77.674 71.094 202610 172480 219630 245860 261650 317400 279440 265240 291720 197280 222900 186140 238510 191610 217700 252520 223140 193910 187530 158470 222550 243050 269060 314140 281010 272790 293450 202930 232400 190020 241890 200660 222220 249420 213240 184910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1646699999.9999998 17514 4704 16603 33229;33230 26618 26618 1 9606 Homo sapiens 0.023761845634680867 LSQQLDK Unmodified 830.44978 0.44978213 777 A0A024RDU9;P13984 GTF2F2 General transcription factor IIF subunit 2 yes no 0 0 0 6 0 1 44.047 44.139 2 0.055975 11294 20230619_1886_Aki_TMTPro18x_K_F6 76.679 24.197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17515 777 16604 33231 26619 26619 1 9606 Homo sapiens 0.027775229720418793 LSQTLSLVPR Unmodified 1112.6554 0.65535823 3330 O94766;Q5U676;B4DNL8;O94766-2;G3V150;E9PNA1 B3GAT3 Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 yes no 0 0 0 4 0 1 56.178 56.186 2 4.76E-05 16726 20230619_1883_Aki_TMTPro18x_K_F4 152.54 122.73 61473 48856 56110 57462 59677 69611 69318 69093 80179 50005 50498 45881 47191 42112 67580 51940 54153 53740 56791 44809 57518 57499 62014 69445 69643 70101 79783 51489 53083 46679 49255 44086 67533 52189 51940 51025 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97404000 17516 3330 16605 33232 26620 26620 1 9606 Homo sapiens 0.1035367643146401 LSQVSDSVSGQTVVDPK Unmodified 1744.8843 0.88430813 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 0 6 0 1 51.832 51.909 3 1.7701E-13 14719 20230619_1886_Aki_TMTPro18x_K_F6 153.72 135.98 89364 61925 81352 82351 86332 81978 98220 106790 106920 101550 107510 99023 100110 93074 118290 115070 110240 98125 82492 56898 83378 81516 89507 83511 98639 107200 108430 102810 109950 100510 103320 97306 119500 114360 105470 93424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 434340000 17517 3337 16606 33233 26621 26621 1 9606 Homo sapiens 0.04166134356205475 LSSAMSAAK Unmodified 864.4375 0.43750288 3570 V9HWF2;P40925;P40925-3;A0A5K1VW95;P40925-2;B9A041;B8ZZ51 HEL-S-32;MDH1 Malate dehydrogenase;Malate dehydrogenase, cytoplasmic yes no 0 0 0 1.67 0.471 1 2 45.846 45.9 2;3 0.0017181 12657 20230619_1880_Aki_TMTPro18x_K_F1 113.18 34.679 82499 65122 85914 88897 113730 164220 103890 103320 167400 76583 81211 88294 86033 69081 79273 92276 99947 86227 76294 59820 87480 88723 116090 158790 107190 109000 163230 79438 87617 88482 87377 73116 81935 91981 95334 82013 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152990000 17518 3570 16607 33234;33235;33236 26622;26623 26622 2 9606 Homo sapiens -0.00013836762650498713 LSSCDMCELAR Oxidation (M) 1356.5472 0.54720604 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;Q01433-5;Q01433-3;Q01433-4;H0YF16;A0A804H2H4 AMPD2 AMP deaminase 2 yes no 0 1 0 3 0 1 40.783 40.842 2 0.0059955 9965 20230619_1882_Aki_TMTPro18x_K_F3 78.939 66.703 35128 28293 31259 38593 46724 40990 40349 39969 45672 46752 46580 49596 51277 40479 48984 57679 53931 59175 32449 25987 32340 38143 47067 41267 41211 41088 46299 46966 47981 49920 52060 42983 50174 57737 51589 56169 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40801000 17519 1570 16608 33237 26624 26624 1029 1 9606 Homo sapiens -0.11680567267944753 LSSCDMCELAR Unmodified 1340.5523 0.55229142 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;Q01433-5;Q01433-3;Q01433-4;H0YF16;A0A804H2H4 AMPD2 AMP deaminase 2 yes no 0 0 0 4 0 1 48.313 48.353 2 3.7622E-12 13209 20230619_1883_Aki_TMTPro18x_K_F4 209.39 175.08 104520 90463 95851 107800 94255 115100 120200 118900 133080 149560 140980 161750 163350 132310 128490 184040 170610 172510 96613 82952 98167 107550 98832 115910 120090 122030 135270 149830 145360 162620 164350 140190 133900 183290 162840 163960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 401560000 17520 1570 16608 33238 26625 26625 1 9606 Homo sapiens -0.10436263405313184 LSSDCEDQIR Unmodified 1221.5296 0.52956537 4310 Q92896;Q92896-3;Q92896-2;Q6ZMF1 GLG1 Golgi apparatus protein 1 yes no 0 0 0 1 0 1 39.509 39.509 2 2.3016E-09 9901 20230619_1880_Aki_TMTPro18x_K_F1 199.46 159.91 32902 17554 26125 36905 48895 56976 52052 51405 68680 51811 46719 48695 51038 39435 44560 43261 66187 51454 30306 16252 27531 35883 49134 55909 52749 52882 68121 52282 49164 49229 51655 41225 46601 43877 63017 48838 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94123000 17521 4310 16609 33239 26626 26626 1 9606 Homo sapiens -0.07233823206956913 LSSDVLTLLIK Unmodified 1200.7329 0.73293985 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 3 0 1 65.201 65.235 2 0.021926 20623 20230619_1882_Aki_TMTPro18x_K_F3 83.358 50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17522 2417 16610 33240 26627 26627 1 9606 Homo sapiens 0.1406026957697577 LSSEMNTSTVNSAR Oxidation (M) 1511.6886 0.68858521 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 LMNB1 Lamin-B1 yes no 0 1 0 4.5 0.957 1 2 2 1 35.037 35.102 2;3 7.2364E-09 7560 20230619_1883_Aki_TMTPro18x_K_F4 155.39 140.59 29350 23814 30040 36194 43811 45633 34163 33550 38638 41275 50314 51840 46070 40756 46523 43470 46001 48439 27143 21900 30696 35621 44140 45145 35154 35325 39589 41623 50901 51756 47175 42541 47255 43934 44036 45946 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 298410000 17523 3482 16611 33241;33242;33243;33244;33245;33246 26628;26629 26628 2131 2 9606 Homo sapiens -0.046791543694553184 LSSEMNTSTVNSAR Unmodified 1495.6937 0.69367058 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 LMNB1 Lamin-B1 yes no 0 0 0 5.5 0.5 2 2 41.342 41.432 2;3 4.8997E-37 10124 20230619_1886_Aki_TMTPro18x_K_F6 286.93 255.51 158480 119820 151860 149900 157320 203760 133590 139340 186040 184580 209170 217030 216930 187090 183960 224690 223590 217430 146420 109980 154890 149570 162710 200410 137800 148000 187520 185190 213850 217850 219620 195910 190050 224680 213510 206620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 812170000 17524 3482 16611 33247;33248;33249;33250 26630;26631 26631 2 9606 Homo sapiens -0.0343485050682375 LSSETGGMGSS Unmodified 1011.4179 0.41788965 3930 Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DRD7;H3BSS4 PCBP2 Poly(rC)-binding protein 2 yes no 0 0 0 2.5 0.5 1 1 43.889 43.966 2 0.042595 11387 20230619_1882_Aki_TMTPro18x_K_F3 66.351 60.525 91453 74568 79958 106050 86678 91366 84142 100590 120560 107230 115340 127400 143060 113170 98349 138930 141350 162240 84474 68520 82421 104270 89499 93705 86159 102300 120550 108650 119810 127950 142990 118640 103400 140360 134970 153770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157640000 17525 3930 16612 33251;33252 26632 26632 1 9606 Homo sapiens -0.08736257564044081 LSSFVTK Unmodified 780.43815 0.43815481 2980 F8VPD4;P27708;Q53SY7;H7C3Z5 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 3 0 1 53.25 53.303 3 0.034786 15621 20230619_1882_Aki_TMTPro18x_K_F3 72.138 16.697 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17526 2980 16613 33253 26633 26633 1 9606 Homo sapiens 0.039153259487079595 LSSGNEENKKEEDNDEIK Unmodified 2076.9447 0.94473613 228 A0A024R394;Q9UHD1;A0A024R3C3;Q9UHD1-2;E9PPQ5 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes no 0 0 2 3.5 0.5 1 1 41.38 41.431 4 2.1165E-09 10199 20230619_1882_Aki_TMTPro18x_K_F3 133.71 114.5 274020 212550 263310 289170 318290 329220 304140 301570 395650 385430 404560 338620 440210 328350 300490 392000 418180 328540 253220 195250 269320 286170 325870 329260 310300 312190 398330 383730 415540 345760 441260 342570 314970 389130 398350 313050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 518330000 17527 228 16614 33254;33255 26634;26635 26634 2 9606 Homo sapiens -0.05065844842010847 LSSLFVK Unmodified 792.47454 0.47454032 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 4.5 0.5 1 1 60.501 60.528 2 0.011045 18102 20230619_1885_Aki_TMTPro18x_K_F5 117.17 23.907 247730 218970 233900 219350 247360 281670 269540 247000 293540 234540 232150 219230 243670 192310 270650 246850 260090 221930 229070 200470 238890 222470 256560 279390 271160 254420 295110 237380 241610 222440 249530 202200 274010 245890 248690 211200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75492000 17528 2863 16615 33256;33257 26636;26637 26637 2 9606 Homo sapiens 0.07000202845415515 LSSLIILMPHHVEPLER Unmodified 1983.0976 0.09755256 346 P50454;A0A024R5K8;A8K259;B4DN87;E9PJH8;E9PKH2;E9PPV6;E9PR70 SERPINH1 Serpin H1 yes no 0 0 0 2 0 1 61.178 61.189 4 1.9956E-18 19113 20230619_1881_Aki_TMTPro18x_K_F2 183.58 159.74 29524 19736 19711 27539 18645 26216 42525 41536 51574 33188 32978 35031 36286 35894 29466 45363 38728 43704 27194 18147 20899 27154 20164 26930 41719 41145 51204 34070 34864 35538 36660 37472 30685 45291 37000 41510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 699430000 17529 346 16616 33258 26638 26638 1 9606 Homo sapiens 0.14532768602180113 LSSLPFQK Unmodified 918.51747 0.51746776 418 A0A024R6Y2;P61970;A0A8V8TPY3;A0A8V8TR25;H3BRV9 NUTF2 Nuclear transport factor 2 yes no 0 0 0 3.67 0.471 1 2 56.558 56.574 2;3 0.00071735 16878 20230619_1883_Aki_TMTPro18x_K_F4 172.15 64.488 396070 347060 351480 388170 397190 476960 413410 400900 520420 451870 440550 431710 486150 365230 416600 530940 485780 463440 366060 318040 361720 389810 409970 473820 419100 416170 520890 453550 457630 437130 491190 387840 429300 526750 463970 440980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1465899999.9999998 17530 418 16617 33259;33260;33261 26639;26640 26640 2 9606 Homo sapiens 0.054949729028635375 LSSNAVSQITR Unmodified 1174.6306 0.63060004 2610 B4DW97;Q9BQ39;B4DED6;Q9NTA9;K0J110 DDX50;DKFZp761E0323;mcdrh ATP-dependent RNA helicase DDX50 yes no 0 0 0 2 0 1 44.74 44.822 2 0.0097334 12070 20230619_1881_Aki_TMTPro18x_K_F2 99.439 82.199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17531 2610 16618 33262 26641 26641 1 9606 Homo sapiens 0.05026996558058272 LSSPATLNSR Unmodified 1044.5564 0.55637247 2772 CON__P00761 yes yes 0 0 0 4.2 2.79 1 1 1 1 1 40.513 40.551 2 1.4312E-06 10287 20230619_1880_Aki_TMTPro18x_K_F1 173.37 110.83 + 1223100 739830 949970 1143800 2143100 1411900 1520100 1522400 1955100 846100 1042500 909120 685530 642300 1103700 974590 1127400 606860 1127100 681400 1005700 1124900 2108700 1411700 1580600 1529300 1927500 894990 1096700 912510 731960 687870 1115400 954070 1074800 582200 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3220699999.9999995 17532 2772 16619 33263;33264;33265;33266;33267 26642;26643;26644;26645 26642 4 0.03587653466570373 LSSPERDVER Unmodified 1186.5942 0.59421454 3188 Q53HJ6;M0QXB4;O14579;O14579-2;Q7Z4Z1;O14579-3;M0R061 COPE Coatomer subunit epsilon yes no 0 0 1 2.5 0.5 1 1 33.475 33.537 3 8.3255E-05 7067 20230619_1881_Aki_TMTPro18x_K_F2 126.33 59.708 105480 95582 109960 105380 146140 133500 131930 138660 150540 128310 141690 127860 141780 111680 129800 140760 171080 128040 97639 87569 111820 106060 148330 133070 134430 140950 151920 130240 145700 129370 144120 117290 134520 140250 162990 121910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 111050000 17533 3188 16620 33268;33269 26646;26647 26646 2 9606 Homo sapiens 0.008381196613754582 LSSQEESIGTLLDAIICR Unmodified 2004.0198 0.019755749 2056 A8K4V6;Q9Y3C4-2;Q9Y3C4;Q9Y3C4-3 TPRKB EKC/KEOPS complex subunit TPRKB yes no 0 0 0 7 0 1 66.549 66.572 3 1.3572E-18 20758 20230619_1887_Aki_TMTPro18x_K_F7 136.26 100.52 7279.8 5614.8 5870 8414.9 9154.8 7478.9 8828.5 9862.7 8981.7 7356.5 9830.3 9605.7 10132 9006.5 9826.5 9168.1 7450.2 11147 6718.2 5163.7 6142.7 8251.6 9221.2 7691.3 8925.5 9843.4 9168.4 7636.3 10059 9635.6 10314 9318.7 9864.4 9324 7176.9 10553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6819700 17534 2056 16621 33270 26648 26648 1 9606 Homo sapiens 0.057906661555762184 LSSQIEK Unmodified 803.43888 0.43888309 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 6 0 1 43.629 43.72 2 0.056224 11104 20230619_1886_Aki_TMTPro18x_K_F6 81.642 27.888 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17535 3440 16622 33271 26649 26649 1 9606 Homo sapiens 0.02930120597761743 LSSQISAGEEK Unmodified 1147.5721 0.57208211 567 A0A024R9D2;Q86UE4;E5RJU9;H0YB56 MTDH Protein LYRIC yes no 0 0 0 3 0 1 44.673 44.746 3 0.0072888 11713 20230619_1882_Aki_TMTPro18x_K_F3 77.597 53.508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17536 567 16623 33272 26650 26650 1 9606 Homo sapiens 0.0041989519295384525 LSSTWEGIQAGK Unmodified 1275.6459 0.64591575 1232 A0A140VK56;P37837-2;P37837;F2Z393;B4DID5 TALDO1 Transaldolase yes no 0 0 0 4.5 3.5 1 1 55.041 55.074 2;3 9.5552E-06 16473 20230619_1880_Aki_TMTPro18x_K_F1 135.8 102.74 167510 140960 149730 162290 165180 181050 182590 199270 194980 191440 197010 172220 205100 175390 185270 209230 190270 194800 154780 129230 153900 162450 170840 182090 183520 202010 198040 193300 202230 175970 208120 182610 189160 208850 182030 185150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 424950000 17537 1232 16624 33273;33274 26651;26652;26653 26652 3 9606 Homo sapiens 0.019118633552807296 LSSVGGETSLAEMIATLSDACER Unmodified 2396.1199 0.11994008 1314 A0A8I5KTG3;A0A8I5KTL1;A0A8I5KT58;A0A8I5KX08;A0A8I5KZ42;A0A8I5QL22;A0A1W2PPB7;A0A8I5QJC0;E9PH70;A0A8I5KPM9;B4DK94;A0A8I5KQK7;H7C584;Q9ULH0-3;Q9ULH0-2;Q9ULH0-4;Q9ULH0;H0Y8E4;B4DGY1 KIDINS220 Kinase D-interacting substrate of 220 kDa yes no 0 0 0 6 0 1 65.864 65.908 3 6.3476E-14 20707 20230619_1886_Aki_TMTPro18x_K_F6 142.23 132.18 4521.6 3697.5 2204 3848.8 5661.3 5609.5 5223.5 5166.5 5530 4361.8 4817.3 7791.8 5936 4754 6322.5 6032.9 5039.3 7263.8 4163.2 3387.1 2494 3896.1 5595.6 5531 5295.9 5287.4 5587 4554.9 5048.3 7642.5 6037.9 5071.5 6350.7 6111.6 4849.4 6878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30108000 17538 1314 16625 33275 26654 26654 1 9606 Homo sapiens -0.02227509363592617 LSTACPGR Unmodified 860.41744 0.41743614 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DS32 CSE1L Exportin-2 yes no 0 0 0 7 0.816 1 1 1 34.433 34.471 2 0.0019924 7281 20230619_1888_Aki_TMTPro18x_K_F8 133.81 93.544 147970 70394 174070 168930 229940 284820 180680 226580 211080 158350 226540 268840 224180 203400 213810 107980 273960 257440 136670 65372 175480 163790 233320 277540 186150 233500 213740 167120 231890 265370 228500 207020 220290 118780 261420 242990 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 146370000 17539 1462 16626 33276;33277;33278 26655;26656 26656 2 9606 Homo sapiens -0.018355877026010603 LSTALAR Unmodified 730.43374 0.43373813 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 1.5 0.5 1 1 41.605 41.643 2 0.0062973 10584 20230619_1881_Aki_TMTPro18x_K_F2 134.12 74.484 714700 507950 588620 610610 744870 704310 675460 694700 1011800 566380 640820 529690 555540 423460 621960 550960 668830 509260 659360 466180 610700 609570 759530 705200 695160 706830 995410 579040 670480 536350 572770 447260 633410 549560 638380 484730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 309650000 17540 1091 16627 33279;33280 26657;26658 26658 2 9606 Homo sapiens 0.05773861525801749 LSTDDLNSLIAHAHR Unmodified 1661.8485 0.84853174 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 0 0 8 0 1 52.485 52.562 4 3.6908000000000005E-25 14635 20230619_1888_Aki_TMTPro18x_K_F8 175.88 155.42 100510 121850 90267 104100 100570 97013 109080 114890 124270 109030 102660 99284 93324 119740 81029 115310 110240 105870 93139 111310 92773 106620 103790 99200 109960 115970 124860 110250 105900 101960 95280 122420 84416 115350 105160 100670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1124800000 17541 3954 16628 33281 26659 26659 1 9606 Homo sapiens 0.044081416898961834 LSTLCPSAVLQR Unmodified 1343.7231 0.72312022 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3;B3KM30 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 4 0 1 55.208 55.22 2 1.2724E-15 16279 20230619_1883_Aki_TMTPro18x_K_F4 218.6 176.73 167550 141130 154320 148000 143790 165220 175540 165020 177600 167240 145770 125950 155870 124760 145110 183580 171320 151920 154860 129280 157690 149240 151090 165810 175200 168650 179580 167670 151390 129840 158250 131880 149400 181650 163530 144700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168730000 17542 2126 16629 33282 26660 26660 1 9606 Homo sapiens 0.06500758299966947 LSTMETGTGLIR Oxidation (M) 1293.6599 0.65985126 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1;A0A494C0X4 TPP2 Tripeptidyl-peptidase 2 yes no 0 1 0 6.5 0.5 1 1 46.325 46.41 2 0.0049069 12331 20230619_1886_Aki_TMTPro18x_K_F6 79.489 62.713 43796 38927 43072 44379 45605 48910 52489 40648 57396 52228 60300 56338 61031 49272 51634 63402 58428 65582 40513 35677 43864 44435 47342 48945 52650 42450 58285 52314 61728 56799 61802 51821 53114 63570 55888 62241 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 121970000 17543 1552 16630 33283;33284 26661 26661 1016 1 9606 Homo sapiens 0.024767727920789184 LSTMETGTGLIR Unmodified 1277.6649 0.66493664 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1;A0A494C0X4 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 8 0 1 52.766 52.841 2 0.00061504 14771 20230619_1888_Aki_TMTPro18x_K_F8 123.51 92.795 66382 55563 69036 73557 68614 93605 72425 66200 95446 84555 76627 83971 94836 73847 90845 89451 89418 92369 61411 51011 69950 73029 71580 92451 73501 70036 95201 84516 80365 84892 95981 77377 92359 89811 85589 87690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144100000 17544 1552 16630 33285 26662 26662 1 9606 Homo sapiens 0.037210766546877494 LSTVASTDILATVLEEMPPFPER Unmodified 2515.288 0.28799169 1042 O94973-2;O94973;B7Z5S9;A0A0G2JS82;B7Z1Q4;O94973-3;A0A8I5KPP9;A0A0G2JQM1 AP2A2 AP-2 complex subunit alpha-2 yes no 0 0 0 7 0 2 67.987 68.008 3 2.3943E-07 21279 20230619_1887_Aki_TMTPro18x_K_F7 94.463 85.093 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17545 1042 16631 33286;33287 26663;26664 26663 2 9606 Homo sapiens 0.09095920892514187 LSVACFYGGTPYGGQFER Unmodified 2007.9149 0.91489675 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 2 0.707 1 2 1 61.634 61.647 2;3 7.9299E-24 19050 20230619_1882_Aki_TMTPro18x_K_F3 158.98 148.12 70574 66903 75501 88705 67623 92701 83864 86213 128270 95550 90549 87849 115460 98997 87608 137320 112890 147450 65360 61396 76275 87810 71510 93228 84965 88775 126580 95947 95712 90025 115780 103810 91260 137760 108000 139810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 420910000 17546 1748 16632 33288;33289;33290;33291 26665;26666 26666 2 9606 Homo sapiens -0.04874410530374007 LSVAGNCR Unmodified 875.42834 0.42833518 1339 E5KRK5;A0A291FIZ5;P28331-4;P28331;P28331-2;C9JPQ5;F8WDL5 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 4.5 3.5 1 1 36.199 36.193 2 0.012481 8426 20230619_1880_Aki_TMTPro18x_K_F1 89.752 67.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17547 1339 16633 33292;33293 26667;26668 26667 2 9606 Homo sapiens -0.014361853283162418 LSVDYGK Unmodified 780.40177 0.4017693 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;B4DDU2;F8VQQ4;C9JDS9;D3DX41;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;P0DPH7-2 TUBA1B;TUBA1A;TUBA4A;MGC16703;TUBA1C;TUBA2 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 0 0 0 6.5 1.12 1 1 1 1 47.502 47.578 2 0.015435 12513 20230619_1888_Aki_TMTPro18x_K_F8 120.45 35.094 7859000 5178300 6312900 7051600 7664600 8736500 7384000 7291900 10888000 8139000 9192800 10380000 9617800 9007800 5977000 9368200 11185000 10928000 7246400 4760200 6566200 6986300 7859900 8671200 7567200 7573000 10817000 8256600 9531100 10386000 9641400 9353100 6447600 9485800 10649000 10364000 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 22098000000 17548 2408;3747;4144 16634 33294;33295;33296;33297 26669;26670;26671;26672 26672 4 9606 Homo sapiens 0.0027844905199572167 LSVDYGKK Unmodified 908.49673 0.49673232 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;B4DDU2;F8VQQ4;C9JDS9;D3DX41;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;P0DPH7-2 TUBA1B;TUBA1A;TUBA4A;MGC16703;TUBA1C;TUBA2 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 0 0 1 1.5 0.5 1 1 44.652 44.693 3 0.039354 11928 20230619_1881_Aki_TMTPro18x_K_F2 61.09 36.314 625180 507810 561240 539080 810520 698610 678020 664340 761740 453990 499170 394020 447290 365190 620890 340250 423690 270400 577570 465260 578790 544280 817290 694220 693660 675310 760020 468850 521950 402080 466170 376350 615800 339480 406230 258130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12933000000 17549 2408;3747;4144 16635 33298;33299 26673 26673 1 9606 Homo sapiens 0.038823825231816045 LSVEESEAAGDGVDTK Unmodified 1605.737 0.73697519 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;Q6PJY7 NASP Nuclear autoantigenic sperm protein yes no 0 0 0 1.5 0.5 1 1 48.845 48.878 3 1.4366E-42 13871 20230619_1880_Aki_TMTPro18x_K_F1 272.72 252.34 151220 122650 127320 136000 178640 189690 158360 146810 192510 158750 179030 168440 180440 145720 162240 180880 184750 170180 139630 112410 132140 136950 181010 186820 161850 153270 193580 160210 184300 169870 183210 152940 166640 180570 176450 161800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 925050000 17550 3605 16636 33300;33301 26674;26675 26674 2 9606 Homo sapiens -0.04166382248581613 LSVENVPCIVTLCK Unmodified 1630.8422 0.84224908 212 B2RDZ9;A0A024R2T3;Q15024 EXOSC7 Exosome complex component RRP42 yes no 0 0 0 3 0 1 62.247 62.277 3 0.06824 19355 20230619_1882_Aki_TMTPro18x_K_F3 40.552 26.394 29434 20302 25723 24838 25647 31289 29711 23652 38257 25054 12070 22813 18284 20874 22053 20633 19050 25966 27161 18638 26437 24795 26801 30969 29951 24746 37440 25219 13977 23137 18692 21572 22187 21043 18303 24580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3481100 17551 212 16637 33302 26676 26676 1 9606 Homo sapiens 0.052061641424870686 LSVGTNEK Unmodified 846.4447 0.44469675 2029 Q6LES9;A8K3S0;P40937;A8K4Z2;Q59GW7;P40937-2 RFC5 Replication factor C subunit 5 yes no 0 0 0 6 0 1 42.124 42.219 2 0.0013465 10432 20230619_1886_Aki_TMTPro18x_K_F6 144.09 76.008 59646 31827 66768 71649 87682 92794 69835 89844 82140 60499 93367 107090 84068 83829 81543 42561 107500 100100 55087 29501 67563 69283 88909 92079 71905 91158 83328 64140 94952 105700 86071 85055 84165 46797 102560 94492 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34621000 17552 2029 16638 33303 26677 26677 1 9606 Homo sapiens 0.015332191094216796 LSVISVEDPPQR Unmodified 1338.7143 0.71432967 3563 P38117-2;P38117 ETFB Electron transfer flavoprotein subunit beta yes no 0 0 0 4.5 0.5 1 1 51.531 51.582 2 2.1161E-05 14437 20230619_1885_Aki_TMTPro18x_K_F5 174.86 144.36 143070 117570 132480 147860 135250 171420 161830 180800 183070 173300 176200 171320 190760 154080 173050 186590 191900 209740 132210 107880 135640 147150 141190 171680 162330 183760 185020 175470 181720 173480 193350 161320 177400 188230 183550 198900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 229400000 17553 3563 16639 33304;33305 26678;26679 26679 2 9606 Homo sapiens 0.05852107935129425 LSVLGAITSVQQR Unmodified 1370.7882 0.78816332 2699 B7Z7P8;P62495-2;P62495;I3L492;D6RJE8;D6RCB3 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 6 0 1 61.397 61.451 3 1.3777E-16 18758 20230619_1886_Aki_TMTPro18x_K_F6 216.84 180.42 39688 33062 36881 43704 36788 42420 43788 40014 49534 28925 26916 26079 30944 24677 36650 29821 28703 26861 36681 30353 37743 43231 38431 42926 43899 40776 49176 29783 28874 26573 31716 25780 36690 29745 27527 25550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 567170000 17554 2699 16640 33306 26680 26680 1 9606 Homo sapiens 0.11760076097448291 LSVNSHFMK Unmodified 1061.5328 0.53280025 1953 I3L505;A4UCS3;O14561 NDUFAB1 Acyl carrier protein;Acyl carrier protein, mitochondrial yes no 0 0 0 3 0 1 46.014 46.092 3 8.9941E-05 12373 20230619_1882_Aki_TMTPro18x_K_F3 140.07 103.74 174620 191270 188430 171860 231230 339690 222760 227150 270460 51376 58454 44054 55638 49881 92268 59563 57932 44092 161920 174840 190930 177440 237270 328010 226420 235010 263670 61642 69830 45498 58714 51744 91099 58952 55665 42093 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73700000 17555 1953 16641 33307 26681 26681 1 9606 Homo sapiens 0.004495164283980557 LSVNSVTAGDYSR Unmodified 1367.6681 0.66810776 2916 E9PGT1;Q15631;B3KRM8;H7C1D4;B7Z5D9;Q53GR3 TSN Translin yes no 0 0 0 6.5 0.5 1 1 47.61 47.694 2 2.4131E-36 12480 20230619_1887_Aki_TMTPro18x_K_F7 327.1 305.56 235150 163870 193510 234640 209580 281210 224800 232810 304110 268280 264410 285560 298850 251060 260680 288170 288200 296910 216920 150690 200580 231590 217480 279510 228210 242110 303710 269890 274770 287850 302110 262100 267420 289420 275540 281880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 903400000 17556 2916 16642 33308;33309 26682;26683 26683 2 9606 Homo sapiens -0.0010195696695518564 LSVQGEVSTFTGK Unmodified 1351.6983 0.69834526 2970 F5H1S8;Q14165;H0YG07 MLEC Malectin yes no 0 0 0 7.67 0.471 1 2 57.684 57.736 2;3 3.0921E-15 16871 20230619_1888_Aki_TMTPro18x_K_F8 240.6 172.7 85194 79633 85136 78226 78826 78922 90619 92180 104560 95362 86053 95095 108820 86289 90225 100110 94398 104430 78846 72877 86342 79223 82638 80131 91132 93327 105020 96199 90216 96220 109420 90074 92359 100590 90348 99101 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 526830000 17557 2970 16643 33310;33311;33312 26684;26685 26685 2 9606 Homo sapiens 0.03656401698208356 LSVSGRDENSVELTMAEGPYK Unmodified 2281.0896 0.089626228 3900;2497 Q14697-2;E9PKU7;B4DZ53;E9PNH1;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 1 5.5 0.5 1 1 54.574 54.646 3 1.1773E-16 15672 20230619_1885_Aki_TMTPro18x_K_F5 163.91 149.45 123810 122080 127900 119200 118190 123260 135860 141350 127870 158730 152370 135800 158980 130530 154810 176360 164980 164520 114660 111700 129370 120810 123880 124850 135800 143560 131860 158700 155390 138830 161810 137280 158180 175750 157750 156390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 388030000 17558 3900;2497 16644 33313;33314 26686;26687 26686 2 9606 Homo sapiens 0.000325000334669312 LSVTATR Unmodified 746.42865 0.42865276 3492 P22695;H3BRG4;H3BSJ9;H3BP04 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 5.33 3.09 1 1 1 37.534 37.551 2 0.0035866 8991 20230619_1880_Aki_TMTPro18x_K_F1 154.01 42.286 268870 151390 314700 343130 470060 475260 419950 459090 484850 271130 389360 420960 380620 326970 372430 193480 430990 391010 248480 140300 318380 332100 474180 469820 428270 464950 485660 288930 403850 417090 388430 333510 381040 208270 411530 369440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 291090000 17559 3492 16645 33315;33316;33317 26688;26689 26688 2 9606 Homo sapiens 0.04529557663192918 LSYCGGGEALAVPFEPAR Unmodified 1892.9091 0.90908309 3045 H0YF29;Q6P1X6-2;Q6P1X6 C8orf82 UPF0598 protein C8orf82 yes no 0 0 0 6 0 1 60.846 60.903 3 0.0010055 18489 20230619_1886_Aki_TMTPro18x_K_F6 76.761 55.203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17560 3045 16646 33318 26690 26690 1 9606 Homo sapiens -0.0016550904203995742 LTAEAIQTPLK Unmodified 1183.6812 0.68123863 2104 B4DXT3;A8K7A2;Q53HL2 CDCA8 Borealin yes no 0 0 0 8 0 1 54.697 54.764 3 0.0052537 15605 20230619_1888_Aki_TMTPro18x_K_F8 80.979 60.773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17561 2104 16647 33319 26691 26691 1 9606 Homo sapiens 0.09674525883065144 LTAEDLFEAR Unmodified 1163.5823 0.58225287 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0;Q96IE3 PLEC;PLEC1 Plectin yes no 0 0 0 3 0 1 58.436 58.467 2 0.0008607 17808 20230619_1882_Aki_TMTPro18x_K_F3 116.12 69.224 73427 57145 68002 77543 72380 78032 94535 83266 94726 94477 96441 100010 101780 93791 91701 115260 113330 130190 67834 52491 69671 76627 75398 78982 93998 85041 96565 95050 99135 101090 103300 98084 94755 116230 108340 123430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59421000 17562 3921 16648 33320 26692 26692 1 9606 Homo sapiens 0.007005029181982536 LTAEEMDER Oxidation (M) 1108.4707 0.47065351 707 P46940;A4QPB0;A0A024RC65;H0YLE8;A0A0J9YXZ5;Q6P1N4;Q05DN7;Q5FWG8;A0A087X225 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 1 0 1 0 1 35.348 35.348 2 0.00032532 8121 20230619_1880_Aki_TMTPro18x_K_F1 136.21 100.33 49459 39605 46625 43414 60202 70120 59130 69161 71496 60200 69070 74268 72642 62820 68356 70913 82295 74650 45706 36299 47794 43908 61481 68844 60078 70416 72008 61757 71175 74374 73845 65595 70362 71340 78552 70891 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55786000 17563 707 16649 33321 26693 26693 427 1 9606 Homo sapiens -0.07924299501269161 LTAIDILTTCAADIQR Unmodified 1773.9295 0.92948418 3312 O75643;A4FU77;B4E150;B4E0P5;Q9UNV9;A2RRQ7 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 1 0 1 63.952 63.952 3 0.023481 20118 20230619_1880_Aki_TMTPro18x_K_F1 50.653 37.453 5713.9 6587.1 6882 6609.6 4619.9 7087.2 7664 10309 7912.1 9067.1 7130.4 7771.1 7241.9 6754.9 11240 6049.5 10880 8971.1 5305.9 6025.6 6862 6688.8 5070 7200.7 7566.8 10263 8022.3 9181.1 7372.1 7903.9 7582.9 6968.5 11308 6270.9 10400 8496.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24032000 17564 3312 16650 33322 26694 26694 1 9606 Homo sapiens 0.07347661617791346 LTALDYHNPAGFNCK Unmodified 1719.8039 0.80388973 4012 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;G3V4E7 C14orf166 UPF0568 protein C14orf166 yes no 0 0 0 1.5 0.5 1 1 52.102 52.121 3 3.1968E-11 15212 20230619_1880_Aki_TMTPro18x_K_F1 166.03 147.2 192910 134870 138510 184070 126710 194260 171400 191310 259540 233950 188320 282700 358300 312610 145270 474100 401830 463160 177800 123950 145400 181880 134490 195410 172910 196760 256760 235800 204360 285970 350600 329950 167460 472100 382410 439810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 377350000 17565 4012 16651 33323;33324 26695;26696 26695 2 9606 Homo sapiens -0.02722005447799347 LTALQAQPGSIVPTLVLAESLPGATTR Unmodified 2703.5171 0.51708042 4366 Q96IR7 HPDL 4-hydroxyphenylpyruvate dioxygenase-like protein yes yes 0 0 0 4.5 0.5 1 1 65.389 65.399 3 9.382599999999999E-21 20577 20230619_1883_Aki_TMTPro18x_K_F4 161.49 147.18 6057.7 4046.9 3136.9 6258.3 6097.7 6578.4 5686.9 4979.5 7174 6196.3 5728.2 7726.8 8917.7 6256.8 6844.1 6969.5 7021.1 8290.8 5572.6 3725.5 3493 6132.6 6097.4 6589.3 5796.6 5235.5 7170.5 6247.4 6097.5 7716.4 8892.6 6547.5 7006.3 7066.1 6724.8 7856 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30978000 17566 4366 16652 33325;33326 26697;26698 26697 2 9606 Homo sapiens 0.23346256180730052 LTAPEDVFSK Unmodified 1105.5655 0.56554017 4301 Q92621;B4DE72;Q6P486;U3KPX2 NUP205 Nuclear pore complex protein Nup205 yes no 0 0 0 5.5 0.5 1 1 56.78 56.846 2 1.6555E-05 16803 20230619_1886_Aki_TMTPro18x_K_F6 183.67 137.67 121020 108660 120630 134930 112110 143770 124370 117250 157450 155890 153840 156540 166870 148060 142420 185260 175670 184350 111970 99665 122550 134190 117660 144060 125720 122700 158420 155560 158580 158620 168810 154960 147320 185380 167820 175080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81376000 17567 4301 16653 33327;33328 26699 26699 1 9606 Homo sapiens 0.01698002032230761 LTAQVEELSK Unmodified 1116.6027 0.60265396 349 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;K4DIE0 NUMA1 Nuclear mitotic apparatus protein 1 yes no 0 0 0 5.5 0.5 1 1 52.862 52.936 2 0.00033399 15023 20230619_1885_Aki_TMTPro18x_K_F5 153.33 105.98 197480 152550 176420 179310 173400 213980 181310 169720 205270 232100 236730 230000 252930 213880 202170 272000 244110 242090 182380 139920 180950 179340 180820 212720 183160 178140 209180 231190 242010 233110 255220 224190 209180 270530 233140 230260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175120000 17568 349 16654 33329;33330 26700 26700 1 9606 Homo sapiens 0.04901673577978727 LTAQVEQLEVFQR Unmodified 1559.8308 0.83075641 3906 Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1 variant protein;NUMA1 Nuclear mitotic apparatus protein 1 yes no 0 0 0 7 0 1 60.798 60.841 3 4.1037E-08 18169 20230619_1887_Aki_TMTPro18x_K_F7 159.75 146.07 40135 34685 36073 42435 41740 46605 51181 47458 55497 48270 48548 50452 52520 43172 49390 54782 52462 55135 37093 31813 37117 42270 43170 46829 51164 48455 55999 48816 50332 50878 53323 45395 50479 54868 50184 52354 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168430000 17569 3906 16655 33331 26701 26701 1 9606 Homo sapiens 0.07323426435027613 LTATPTPLGGMTGFHMQTEDR 2 Oxidation (M) 2292.0515 0.051466583 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 2 0 6 0 1 46.6 46.684 3 6.1979E-05 12451 20230619_1886_Aki_TMTPro18x_K_F6 74.325 60.594 23991 18327 22135 27263 25059 28550 30266 25649 27421 27565 35191 32465 29980 31245 28859 31197 28752 36514 22161 16854 22721 26796 25934 28694 30119 26477 28389 27909 35497 32709 30741 32247 29377 31645 27564 34597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28372000 17570 3309 16656 33332 26702 26702 1935;1936 1 9606 Homo sapiens -0.04287709152868047 LTATPTPLGGMTGFHMQTEDR Oxidation (M) 2276.0566 0.056551961 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 1 0 7 0 1 50.946 51.024 3 5.8881E-23 14049 20230619_1887_Aki_TMTPro18x_K_F7 183.24 167.65 24507 24195 28537 27746 27094 36319 29955 31028 32032 31314 36147 39265 32753 32385 27351 35291 39938 43508 22721 22168 28636 27846 28372 35940 30118 32068 32671 31874 36759 39259 33321 33773 28647 35852 38115 41224 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105670000 17571 3309 16656 33333 26703 26703 1935;1936 1 9606 Homo sapiens -0.030434052901910036 LTATPTPLGGMTGFHMQTEDR Unmodified 2260.0616 0.061637339 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 0 8 0 1 56.057 56.119 3 1.4789E-55 16201 20230619_1888_Aki_TMTPro18x_K_F8 285.1 265.55 48602 37975 47692 50389 32806 47900 41257 42238 50960 61645 46724 54371 57650 55357 48372 66165 59698 66101 44921 34874 48322 49826 35591 48467 41440 44069 51284 61037 48665 55523 58110 57624 50077 66259 57053 62760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139260000 17572 3309 16656 33334 26704 26704 1 9606 Homo sapiens -0.0179910142760491 LTAVCMECFR Unmodified 1285.5617 0.56173389 1407 B5BU32;A0A384MDV9;K7ERV3;P04183;A0A024R8N6;K7ES52;K7ERJ1 TK1 Thymidine kinase;Thymidine kinase, cytosolic yes no 0 0 0 1 0 1 54.939 54.939 2 2.5643E-07 16393 20230619_1880_Aki_TMTPro18x_K_F1 153.05 118.79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17573 1407 16657 33335 26705 26705 1 9606 Homo sapiens -0.06962450329137937 LTAYAMTIPFVR Unmodified 1381.7428 0.74279303 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8YG21;A0A2R8Y688 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 6 0 1 63.465 63.513 2 2.5315E-07 19692 20230619_1886_Aki_TMTPro18x_K_F6 138.22 105.75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17574 2908 16658 33336 26706 26706 1 9606 Homo sapiens 0.06719134310696973 LTAYEFAK Unmodified 941.48583 0.48583328 2846 D6RCD0;Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes no 0 0 0 8 0 1 54.64 54.707 3 0.041036 15582 20230619_1888_Aki_TMTPro18x_K_F8 59.8 9.9865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17575 2846 16659 33337 26707 26707 1 9606 Homo sapiens 0.01274980148900795 LTCFELAPK Unmodified 1077.5529 0.55286699 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8 IFI16 Gamma-interferon-inducible protein 16 yes no 0 0 0 1 0 1 58.14 58.14 2 0.0015382 17728 20230619_1880_Aki_TMTPro18x_K_F1 132.76 103.61 114620 101600 105980 128350 245560 299780 259270 251910 285050 232120 181560 189590 266420 189830 193140 291440 218920 223280 105980 93211 110770 129570 244600 288860 261060 259850 284900 234520 194890 194570 265560 201290 199650 287120 209240 212780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 336780000 17576 2829 16660 33338 26708 26708 1 9606 Homo sapiens 0.017192673683439352 LTCPCCNTR Unmodified 1180.4787 0.47873255 1116 O75150;O75150-4;A0A0S2Z537;A8K6K1;H3BP71;B4DMM1;Q6ZN99;B4DFU2;B4E313 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 0 0 0 8 0 1 35.386 35.375 2 0.00064704 7651 20230619_1888_Aki_TMTPro18x_K_F8 128.38 84.575 38718 21515 36971 37630 53730 50927 43181 47073 46587 26053 36564 26218 28326 26128 34040 18883 36715 26696 35716 19858 37944 36828 54139 50387 44261 47774 46796 27498 37569 26646 29462 26577 34572 19585 35034 25310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15406000 17577 1116 16661 33339 26709;26710 26710 2 9606 Homo sapiens -0.10428767057146615 LTDCVVMR Unmodified 992.47832 0.47832184 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A087WUI2;I6L957;A0A7I2V4N0;A0A7I2YQN4 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 5.5 1.12 1 1 1 1 46.578 46.651 2 0.0026042 12005 20230619_1887_Aki_TMTPro18x_K_F7 124.08 90.959 923510 642560 792880 891760 787830 1056600 973710 925310 1098500 1031200 1070500 1174900 1320000 1047700 998840 1262300 1239800 1248000 852150 590660 817140 881860 825600 1052200 974710 957400 1111000 1041200 1111100 1181900 1323700 1096500 1036100 1263500 1183900 1185500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1874799999.9999998 17578 3491 16662 33340;33341;33342;33343 26711;26712 26712 2 9606 Homo sapiens -0.018218187146658238 LTDCVVMRDPASK Oxidation (M) 1506.717 0.71704856 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A087WUI2;I6L957;A0A7I2V4N0;A0A7I2YQN4 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 1 1 6.5 0.957 1 2 2 1 43.02 43.093 3;4 0.0029766 10469 20230619_1887_Aki_TMTPro18x_K_F7 90.444 72.635 742410 593640 684020 680370 824310 706720 812000 788500 732710 866960 856710 819370 870160 697970 577700 1288800 555490 889200 685950 544310 701550 680720 842940 715240 817160 801940 756770 870010 873140 831110 873290 754770 595580 1261000 534010 847580 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3018599999.9999995 17579 3491 16663 33344;33345;33346;33347;33348;33349 26713;26714;26715 26713 2154 3 9606 Homo sapiens -0.016041279938690423 LTDCVVMRDPASK Unmodified 1490.7221 0.72213394 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A087WUI2;I6L957;A0A7I2V4N0;A0A7I2YQN4 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 1 7 0.816 1 1 1 47.49 47.566 3 7.941E-06 12462 20230619_1888_Aki_TMTPro18x_K_F8 122.66 107.28 2233600 1926600 2194000 1945800 2002200 2181300 2280400 2258100 2142900 2639800 2529200 2287700 2988500 2214500 2397900 3166200 2878800 2636400 2065800 1764000 2227500 1968700 2101400 2190800 2280200 2311200 2209300 2635600 2595100 2338100 3005500 2338200 2479500 3134500 2748100 2510500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6259499999.999999 17580 3491 16663 33350;33351;33352 26716;26717 26717 2 9606 Homo sapiens -0.003598241312602113 LTDEEVEMTR Unmodified 1221.5547 0.55471749 1879 A0A994J5K1;Q5SXN9;Q10713;A0A994J7S6;B4DRK5 PMPCA Mitochondrial-processing peptidase subunit alpha yes no 0 0 0 1 0 1 46.24 46.24 2 1.6683E-13 12809 20230619_1880_Aki_TMTPro18x_K_F1 223.84 186.65 80968 61374 70258 74216 74268 88450 84449 84675 101700 106020 103660 109350 128920 101940 93258 125420 127120 121410 74752 56314 72358 74089 77199 88263 85092 87317 102780 106110 107370 110610 129060 106670 97498 125340 121260 115380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99934000 17581 1879 16664 33353 26718 26718 1 9606 Homo sapiens -0.04719768404356728 LTDEEVEMTR Oxidation (M) 1237.5496 0.54963211 1879 A0A994J5K1;Q5SXN9;Q10713;A0A994J7S6;B4DRK5 PMPCA Mitochondrial-processing peptidase subunit alpha yes no 0 1 0 1 0 1 40.682 40.682 2 0.0015721 10384 20230619_1880_Aki_TMTPro18x_K_F1 116.12 93.474 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17582 1879 16664 33354 26719 26719 1208 1 9606 Homo sapiens -0.05964072266965559 LTDEQVALVR Unmodified 1142.6295 0.62953741 2320 B2RDN4;Q14137;A8K3R2;B4DEN9;Q14137-2;Q4G0D9;A0A075B729 BOP1 Ribosome biogenesis protein BOP1 yes no 0 0 0 4 0 1 49.448 49.482 2 3.9982E-07 13752 20230619_1883_Aki_TMTPro18x_K_F4 195.48 161.63 611650 489900 578630 670320 637340 743080 679280 686200 786300 887950 922140 982190 1129600 830430 831330 1050000 1006200 1129700 565250 450000 592040 662800 658980 744380 685940 710360 801120 889270 948890 987600 1131200 873940 861480 1055300 961880 1071700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 346140000 17583 2320 16665 33355 26720;26721 26720 2 9606 Homo sapiens 0.06392782189186619 LTDIHGNVLQYHK Unmodified 1536.8049 0.80487601 3362 V9HWF9;O95861-4;O95861;A6NF51;O95861-2;O95861-3;B7Z9J7 HEL20;BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes no 0 0 0 3.67 3.09 1 1 1 46.767 46.809 4 5.2508E-08 13048 20230619_1880_Aki_TMTPro18x_K_F1 161.21 134.42 317480 274110 304580 349760 337400 396080 388530 384820 388870 330050 324780 283940 289370 275170 351730 340790 355570 308030 293570 251520 311320 347550 349350 396630 388730 392430 393420 335190 334610 290300 299670 287470 356700 339640 339840 293090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 864070000 17584 3362 16666 33356;33357;33358 26722;26723 26722 2 9606 Homo sapiens 0.05794576983430488 LTDIQYGR Unmodified 964.49779 0.49779495 634 A0A024RAV0;P54687-4;P54687;P54687-5;P54687-3;P54687-2 BCAT1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 0 0 6.5 0.5 1 1 45.99 46.077 2 0.0075472 12157 20230619_1886_Aki_TMTPro18x_K_F6 107.29 44.085 298210 213020 263800 322130 265820 306620 333040 327160 429970 378900 441130 475320 469190 371110 359610 456460 465300 480160 275260 195990 271280 315980 278070 311560 334840 334320 432720 383130 453360 474580 472640 390840 373970 458360 444280 455750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326070000 17585 634 16667 33359;33360 26724 26724 1 9606 Homo sapiens 0.01412596892100737 LTDISVTDPEK Unmodified 1216.6187 0.61869795 4714 Q9Y333 LSM2 U6 snRNA-associated Sm-like protein LSm2 yes yes 0 0 0 4 0 1 53.394 53.414 2 3.2528E-12 15559 20230619_1883_Aki_TMTPro18x_K_F4 210.64 161.22 60887 42477 46987 53551 57897 72464 60538 50319 84886 67648 71626 81791 96660 73790 52641 96936 96301 111310 56142 39005 49104 53388 59495 71311 61587 53433 84545 67948 75210 82130 95760 77662 56960 97691 91822 105520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114170000 17586 4714 16668 33361 26725 26725 1 9606 Homo sapiens 0.019053350242074885 LTDQLPLIIVCDR Unmodified 1554.844 0.84396364 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;A0A087WX41;P53675-2;P53675 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 0 7.5 0.5 1 1 63.277 63.304 2 0.00035685 19345 20230619_1887_Aki_TMTPro18x_K_F7 124.38 74.564 71164 58295 69530 77792 61289 92821 76533 77591 102730 77464 65777 80161 86607 71393 72236 91294 106720 135580 65791 53528 70727 77123 64970 92287 77076 80318 101660 78448 70230 80932 87100 75085 75720 93807 101970 128200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285670000 17587 826 16669 33362;33363 26726 26726 1 9606 Homo sapiens 0.0887354122276065 LTDQVMQNPR Oxidation (M) 1216.587 0.58702067 717 Q99733-2;Q99733;B4DS05;B7ZB83;B7ZAK9;A0A024RCC9;A0A2U9QGI0;C9JZI7;A0A994J3W0;B7ZAC7;A0A0J9YXQ2;C9J6D1;E9PKT8;E9PNJ7;E9PS34;E9PJJ2;E9PNW0;E9PP22;E9PKI2;C9J1B1 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 0 1 0 5 0 1 37.279 37.371 2 0.0015576 8410 20230619_1885_Aki_TMTPro18x_K_F5 97.857 76.956 66265 47176 54138 59199 74537 72640 66725 62823 79916 68673 80446 73172 78238 66199 69794 77647 88630 77806 61131 43315 56327 58962 75572 72235 68122 65023 80657 69265 82357 73886 79535 69122 72197 77835 84543 73938 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162140000 17588 717 16670 33364 26727 26727 429 1 9606 Homo sapiens -0.012609362107014022 LTDQVMQNPR Unmodified 1200.5921 0.59210605 717 Q99733-2;Q99733;B4DS05;B7ZB83;B7ZAK9;A0A024RCC9;A0A2U9QGI0;C9JZI7;A0A994J3W0;B7ZAC7;A0A0J9YXQ2;C9J6D1;E9PKT8;E9PNJ7;E9PS34;E9PJJ2;E9PNW0;E9PP22;E9PKI2;C9J1B1 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 0 0 0 6.5 0.5 1 1 43.134 43.22 2 2.6035E-05 10852 20230619_1886_Aki_TMTPro18x_K_F6 157.34 129.86 183540 147060 158410 170850 175630 204200 190770 185290 228680 214480 215380 214640 238960 185350 192660 248830 249380 219840 169500 134860 163360 171040 181670 203530 192620 191370 230310 215250 222580 216960 240870 195560 200160 247240 237860 209220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 304210000 17589 717 16670 33365;33366 26728 26728 1 9606 Homo sapiens -0.00016632348092571192 LTDSVLR Unmodified 802.45487 0.45486751 223 Q6UXN9;A0A024R333 WDR82;TMEM113 WD repeat-containing protein 82 yes no 0 0 0 6 0.816 1 1 1 45.447 45.53 2 0.0015398 11910 20230619_1886_Aki_TMTPro18x_K_F6 167.82 29.345 347300 283140 276770 310810 360100 400460 364520 355740 432430 356050 411300 430270 415440 328140 331730 462420 502240 437310 320600 259490 288500 312830 367860 397180 369270 366520 435600 362210 423180 430130 419930 348950 348910 460710 478440 415860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 365780000 17590 223 16671 33367;33368;33369 26729 26729 1 9606 Homo sapiens 0.04573826834666761 LTDTLVSK Unmodified 875.4964 0.49639797 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 0 7.5 0.5 1 1 51.08 51.157 2;3 0.00020758 14098 20230619_1887_Aki_TMTPro18x_K_F7 140.5 21.227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17591 380 16672 33370;33371 26730;26731 26730 2 9606 Homo sapiens 0.05366962803338993 LTDYVAFLEN Unmodified 1183.5761 0.57610486 290 E9PGT6;B2R8N1;A0A024R4D1;Q99627-2;Q99627;H7C3S9 COPS8 COP9 signalosome complex subunit 8 yes no 0 0 0 5.5 0.5 1 1 66.053 66.096 2 0.0014919 20611 20230619_1885_Aki_TMTPro18x_K_F5 106.38 93.95 34673 27103 30223 30891 26311 34647 35958 34234 34614 42556 39380 37784 41912 34321 38141 44461 42087 42545 32018 24852 31028 30947 27941 34733 35660 35221 35567 42400 40284 38462 42507 36063 39104 44390 40234 40428 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190920000 17592 290 16673 33372;33373 26732;26733 26732 2 9606 Homo sapiens -0.00834015313330383 LTEAKPVDK Unmodified 999.56006 0.56006086 2530 B4DLN1;P52815 MRPL12 39S ribosomal protein L12, mitochondrial yes no 0 0 1 6 0 1 42.267 42.361 3 0.0099078 10498 20230619_1886_Aki_TMTPro18x_K_F6 78.653 50.254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17593 2530 16674 33374 26734 26734 1 9606 Homo sapiens 0.060263232404167866 LTECQLK Unmodified 890.45315 0.45315295 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;A0A3B3ISX1;A0A3B3ITG9;A0A7P0TA14;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 7 0 1 45.274 45.359 2 0.028361 11455 20230619_1887_Aki_TMTPro18x_K_F7 85.064 40.929 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17594 1718;4020 16675 33375 26735 26735 1 9606 Homo sapiens 0.0035444975439986592 LTEDREQIR Unmodified 1158.5993 0.59929991 1702 Q53FL1;A0A7P0Z463;H0YC24;A0A7P0T9B0;Q508I8;Q508I6;Q508I5;Q508I7;Q9H6X2-3;Q9H6X2-4;Q9H6X2-6;Q9H6X2-2;Q9H6X2-5;Q9H6X2;D6W5F9 ANTXR1;ANTXR1/NNG1 fusion Anthrax toxin receptor 1 yes no 0 0 1 2 0 1 33.66 33.717 3 0.0010421 7160 20230619_1881_Aki_TMTPro18x_K_F2 97.277 48.854 57798 43597 52304 59570 79510 94185 74863 71475 101670 72591 82657 82623 88963 78017 81528 88189 100500 88414 53376 40055 54060 59255 80420 92052 76524 74603 101210 73706 85971 83298 90291 81149 84110 88461 95888 84018 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35130000 17595 1702 16676 33376 26736 26736 1 9606 Homo sapiens 0.0263442352400034 LTEEESAPIGIR Unmodified 1313.6827 0.68269519 3290 O75054;O75054-2 IGSF3 Immunoglobulin superfamily member 3 yes no 0 0 0 2 0 1 49.282 49.341 2 0.016207 14136 20230619_1881_Aki_TMTPro18x_K_F2 89.827 65.672 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17596 3290 16677 33377 26737 26737 1 9606 Homo sapiens 0.03840115181174042 LTEENTTLR Unmodified 1075.551 0.55095274 815 A0A087WZG9;A0A087WXK2;A0A087WUL4;A0A087WX23;Q86TG7-2;Q86TG7-3;Q86TG7-5;Q86TG7;Q86TG7-4 PEG10 Retrotransposon-derived protein PEG10 yes no 0 0 0 3 0 1 40.371 40.428 2 0.00012159 9789 20230619_1882_Aki_TMTPro18x_K_F3 152.11 80.397 54766 41478 57425 54973 40981 44026 46303 40397 51137 62447 75151 63247 66306 60494 48388 67914 82167 64610 50638 38095 57837 54270 43998 45280 46579 42159 52793 61948 75472 64118 67151 62862 51485 67892 78169 61466 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35690000 17597 815 16678 33378 26738 26738 1 9606 Homo sapiens 0.016199298840774645 LTEGCSFR Unmodified 968.43857 0.43856552 3581 P42677;H0YMV8;A4D1G5;Q71UM5;C9J1C5 RPS27;RPS27L;LOC392748 40S ribosomal protein S27;40S ribosomal protein S27-like yes no 0 0 0 5 0.816 1 1 1 41.637 41.711 2 0.00067604 10218 20230619_1886_Aki_TMTPro18x_K_F6 178.87 150.69 1747200 1443800 1548100 1621400 1754000 1934800 1902600 1778400 2206400 1796800 1736100 1631600 2075500 1607000 1424900 2156500 2236700 1855200 1614100 1323400 1592800 1627300 1810400 1929400 1918400 1828200 2211400 1811100 1816800 1664400 2076700 1688000 1509100 2139200 2129500 1766700 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4772200000 17598 3581 16679 33379;33380;33381 26739;26740;26741;26742 26741 4 9606 Homo sapiens -0.04691622393727357 LTEIVASAPK Unmodified 1027.5914 0.59136099 3012 G3V5V3;O60524-4;O60524-5;O60524-3;O60524;G3V4D9 NEMF Nuclear export mediator factor NEMF yes no 0 0 0 8 0 1 54.165 54.236 3 0.027531 15348 20230619_1888_Aki_TMTPro18x_K_F8 57.348 39.617 89898 72708 80715 85934 96685 113990 102000 95000 114410 83268 88611 90742 93280 73548 98531 102060 96440 91833 83050 66682 83046 86059 99393 112680 102870 98062 114730 85079 92381 91244 95276 77944 100000 101520 92261 87348 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32584000 17599 3012 16680 33382 26743 26743 1 9606 Homo sapiens 0.07866896274504143 LTELGTVDPK Unmodified 1071.5812 0.58119023 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;B4DNP4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 5 0 1 53.157 53.229 3 0.034648 15172 20230619_1885_Aki_TMTPro18x_K_F5 52.79 38.884 26328 20288 23050 29478 27674 30723 25761 25851 30190 30581 29130 28499 30863 23636 33616 31721 29995 30547 24310 18651 23794 29007 28344 30853 26225 26879 30482 30591 30020 28863 31552 24983 33925 31687 28738 29024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37747000 17600 707 16681 33383 26744 26744 1 9606 Homo sapiens 0.0482628854927043 LTELLVK Unmodified 814.51641 0.51640513 1835 A0A8V8TN35;O95470;H7BXL7;A0A8V8TLU8;A0A8V8TLB6 SGPL1 Sphingosine-1-phosphate lyase 1 yes no 0 0 0 1 0 1 60.366 60.366 3 0.037745 18625 20230619_1880_Aki_TMTPro18x_K_F1 65.803 24.301 53584 52158 53231 59025 54039 63969 57533 58950 63082 61174 63828 73289 73991 67283 65392 78583 67398 83573 49604 47785 54155 59117 56196 64200 57998 60640 63996 62081 65965 73644 74812 70179 66837 79028 64578 79266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8829700 17601 1835 16682 33384 26745 26745 1 9606 Homo sapiens 0.10172758533951765 LTELQLR Unmodified 871.51272 0.51271674 4178 Q7Z7H5-3;Q7Z7H5-2;Q7Z7H5 TMED4 Transmembrane emp24 domain-containing protein 4 yes no 0 0 0 7 0.816 1 1 1 50.372 50.45 2 0.018132 13756 20230619_1887_Aki_TMTPro18x_K_F7 107.67 6.4618 194440 171250 168490 185360 174760 223820 204030 197260 305450 199420 217250 285260 300070 264500 205710 335710 339920 396060 179680 156880 173560 186570 182310 222780 207030 203480 301610 204340 231010 285020 299420 277290 218970 339130 324320 375340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 167780000 17602 4178 16683 33385;33386;33387 26746 26746 1 9606 Homo sapiens 0.07182088760077932 LTEPASVPIHK Unmodified 1190.6659 0.66592292 2723 B9A6J2;Q15042;Q15042-3;D3DP75;A0A8J9AUI2;Q15042-4;A0A8I5KRH8 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes no 0 0 0 7.5 0.5 1 1 45.877 45.94 3 6.3727E-05 11867 20230619_1888_Aki_TMTPro18x_K_F8 127.03 99.913 52327 42040 43485 49396 51181 56424 53248 49404 67777 63445 64490 64864 70174 61220 57038 72796 73050 68521 48312 38555 45062 49369 52654 56374 54001 51343 68099 63439 66557 65668 70843 63869 59200 72686 69707 65143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110180000 17603 2723 16684 33388;33389 26747 26747 1 9606 Homo sapiens 0.07821659085880128 LTEQPELANK Unmodified 1141.5979 0.59790293 2183 B0YJ76;P00374;B4DM58;A0A024RAQ3;P00374-2 DYR;DHFR Dihydrofolate reductase yes no 0 0 0 4.5 0.5 1 1 47.362 47.422 3 0.022857 12674 20230619_1885_Aki_TMTPro18x_K_F5 60.342 33.67 31380 27118 29920 30007 31856 39178 42404 34484 51189 31788 33676 34421 41383 36569 37611 36962 68342 35755 29015 24849 30561 30195 33261 38808 42369 35500 50887 32408 35724 34906 41874 37662 39984 37080 64867 34093 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180430000 17604 2183 16685 33390;33391 26748 26748 1 9606 Homo sapiens 0.03276789435221872 LTESINR Unmodified 831.44503 0.4450311 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 4.5 0.5 1 1 38.441 38.509 2 0.0034523 8915 20230619_1883_Aki_TMTPro18x_K_F4 154.92 100.86 93366 44190 101600 101970 119220 146460 103370 114080 132740 107390 170170 181290 156420 142670 144180 83307 168350 163290 86168 41008 102800 98681 122170 143810 106140 118590 134880 111200 172280 179230 159540 145320 147800 89377 160810 154270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 226390000 17605 1104 16686 33392;33393 26749 26749 1 9606 Homo sapiens 0.022566388292943884 LTESPCALVASQYGWSGNMER Oxidation (M) 2371.0573 0.057280243 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;B4DU71;B4DHT9 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 1 0 7.5 0.5 1 1 60.015 60.061 3 5.762E-17 17802 20230619_1887_Aki_TMTPro18x_K_F7 164.74 155.95 23141 16154 19581 17823 20531 22146 24112 24142 23079 25253 23159 23574 23093 22906 22147 32298 24113 30443 21351 14815 20192 17935 21343 22116 24074 24544 23590 25403 23762 24002 23552 24132 22706 32168 23096 28911 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175520000 17606 3452 16687 33394;33395 26750;26751 26750 2099 2 9606 Homo sapiens -0.07340610641131207 LTESPCALVASQYGWSGNMER Unmodified 2355.0624 0.06236562 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;B4DU71;B4DHT9 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 7 0 1 61.622 61.661 3 5.2181000000000005E-30 18536 20230619_1887_Aki_TMTPro18x_K_F7 203.17 194.99 35760 27881 28777 28381 29043 24811 37765 36532 43975 43642 42882 40613 47686 35948 40893 39570 50432 54105 33003 25540 29811 28611 30344 25665 37755 36696 44411 43622 44239 41201 48170 37482 42220 40519 48186 51221 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134280000 17607 3452 16687 33396 26752 26752 1 9606 Homo sapiens -0.06096306778499638 LTETCFLDCVK Unmodified 1384.6367 0.63667298 378 A0A024R648;Q9Y5J7;A0A1W2PRH9;A0A1W2PQS5;G3V502;G3V2F3 TIMM9 Mitochondrial import inner membrane translocase subunit Tim9 yes no 0 0 0 6 0.816 1 1 1 59.825 59.878 3 0.00022964 18084 20230619_1886_Aki_TMTPro18x_K_F6 108.7 86.164 112510 102650 121750 128770 119330 145750 125310 130080 160710 137040 126230 139270 152890 123990 144130 162990 161770 168910 104180 94161 122930 128110 124440 145700 127120 134150 160350 138260 132410 140770 154780 130510 147800 163420 154660 160350 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 271380000 17608 378 16688 33397;33398;33399 26753;26754;26755 26753 3 9606 Homo sapiens -0.04025989316915002 LTEVLTDSHVK Unmodified 1240.6663 0.66631685 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 5.5 0.5 1 1 51.004 51.081 3 2.9503E-07 14205 20230619_1885_Aki_TMTPro18x_K_F5 144.1 118.63 68924 67867 80890 87170 74958 82339 95166 96130 102250 100630 105380 113950 109460 98460 102950 125580 119970 134090 63905 62252 81138 86395 78821 83941 95017 97384 103890 101840 108220 114560 111330 103490 105870 126160 114720 127220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 624180000 17609 2863 16689 33400;33401 26756 26756 1 9606 Homo sapiens 0.055610340150678894 LTFDSSFSPNTGK Unmodified 1399.662 0.66195975 1286 A0A1L1UHR1;P21796;C9JI87 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 0 4.5 3.5 1 1 56.815 56.843 2;3 1.1948E-27 17160 20230619_1880_Aki_TMTPro18x_K_F1 255.52 210.36 400000 310310 374420 444400 409640 534530 519120 495500 586270 533710 570680 610780 659480 550190 530180 606020 526710 599800 369560 285220 383640 438700 426370 532400 518960 509970 592700 539840 590320 614430 663940 572470 541660 607610 504490 569490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 397440000 17610 1286 16690 33402;33403 26757;26758 26757 2 9606 Homo sapiens -0.02188475198499873 LTFDSSFSPNTGKK Unmodified 1527.7569 0.75692277 1286 A0A1L1UHR1;P21796;C9JI87 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 1 2.5 0.5 1 1 52.313 52.365 3 2.486E-07 15158 20230619_1882_Aki_TMTPro18x_K_F3 141.54 119.65 208080 208090 235460 219460 275600 273450 306050 315670 283750 232460 263720 233090 325390 193890 274560 243700 220820 174310 192890 190510 237430 221620 283440 273500 306140 317210 289420 239370 274040 235500 327040 204200 276920 240370 211470 166470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 885790000 17611 1286 16691 33404;33405 26759 26759 1 9606 Homo sapiens 0.014154582726860099 LTFDTTFSPNTGK Unmodified 1427.6933 0.69325988 62 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;P45880-2;P45880-1;B4DKM5;Q5JSD2;Q5JSD1 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 4.5 3.5 1 1 58.579 58.602 3 5.4481E-11 17210 20230619_1888_Aki_TMTPro18x_K_F8 179.35 166.59 273430 217680 270850 321550 276410 351330 356150 319630 380450 329520 351940 347600 406710 320410 319950 350550 340730 348640 252770 200140 275870 316380 289130 352040 355080 329150 384920 333200 364740 351170 409030 333120 328180 351640 325860 331130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2117199999.9999998 17612 62 16692 33406;33407 26760;26761;26762 26761 3 9606 Homo sapiens -0.003479021643897795 LTFDTTFSPNTGKK Unmodified 1555.7882 0.7882229 62 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;P45880-2;P45880-1;B4DKM5;Q5JSD2;Q5JSD1 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 1 3 0 1 53.763 53.815 3 0.00045411 15922 20230619_1882_Aki_TMTPro18x_K_F3 91.307 73.801 52243 58140 57387 64391 73238 78289 73919 73914 75758 66690 67415 62929 76392 61315 71934 65818 61101 63174 48456 53234 58155 64705 74786 78031 74538 75608 76746 67691 69939 64021 77426 63560 72594 65953 58580 60023 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 845910000 17613 62 16693 33408 26763 26763 1 9606 Homo sapiens 0.03256031306773366 LTFDYHQK Unmodified 1050.5134 0.51344502 2173 Q8IVD9;B0FTY2;A4D2J8 NUDCD3;KIAA1068 NudC domain-containing protein 3 yes no 0 0 0 8 0 1 46.315 46.353 3 0.0011158 12022 20230619_1888_Aki_TMTPro18x_K_F8 117.89 84.627 140110 108040 126040 135300 135880 151660 143580 135000 181830 151490 169150 169460 165230 146470 161280 178210 177990 180390 129400 99166 129420 134600 140670 151740 145490 139560 182460 152850 173980 170480 168630 153490 165090 178650 170150 171300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119720000 17614 2173 16694 33409 26764 26764 1 9606 Homo sapiens -0.0097911659086094 LTFISGR Unmodified 792.44939 0.4493882 2451 B4DDB9;E9PI68;Q15005;E9PL01;E9PRB9 SPCS2 Signal peptidase complex subunit 2 yes no 0 0 0 4 0 1 50.271 50.302 2 0.061305 14100 20230619_1883_Aki_TMTPro18x_K_F4 81.119 32.332 231690 199570 224230 232310 234090 271520 270580 266060 324810 267860 259000 252390 292720 226410 274800 284960 272670 259470 214260 182960 228640 232500 243530 271450 272320 272200 325100 270260 270290 256110 296690 237590 279680 283980 260820 246760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 291680000 17615 2451 16695 33410 26765 26765 1 9606 Homo sapiens 0.04486148042849436 LTFLVAQK Unmodified 918.55385 0.55385327 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49;Q59FY4 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 5 0 1 60.095 60.146 3 0.0068688 17956 20230619_1885_Aki_TMTPro18x_K_F5 86.794 43.548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17616 3833 16696 33411 26766 26766 1 9606 Homo sapiens 0.09131849799553038 LTFLYLANDVIQNSK Unmodified 1737.9301 0.93013611 4574;703 Q9NQG5;E9PIQ9;A0A0C4DGQ6;A0A024RC37;Q96P16;Q96P16-3 RPRD1B;RPRD1A;P15RS Regulation of nuclear pre-mRNA domain-containing protein 1B;Regulation of nuclear pre-mRNA domain-containing protein 1A no no 0 0 0 4.5 0.5 1 1 65.906 65.934 3 0.043266 20814 20230619_1883_Aki_TMTPro18x_K_F4 45.33 31.073 17006 15260 21349 18834 18702 21222 21922 19796 20760 18332 22333 21341 22604 21406 22717 22927 23472 26182 15768 13996 21273 18765 19705 21245 21887 20292 21265 18705 22852 21546 23081 22153 23142 23198 22469 24824 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 39940000 17617 4574;703 16697 33412;33413 26767;26768;26769 26767 3 9606 Homo sapiens 0.09068824329119707 LTFNNPTTEFR Unmodified 1338.6568 0.65681479 3791 Q03111 MLLT1 Protein ENL yes yes 0 0 0 8 0 1 54.42 54.487 2 0.011185 15483 20230619_1888_Aki_TMTPro18x_K_F8 92.428 73.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17618 3791 16698 33414 26770 26770 1 9606 Homo sapiens 0.0010326572951271373 LTFNQGGQPFSEVGEVK Unmodified 1835.9054 0.90537792 4672 Q9UJY4 GGA2 ADP-ribosylation factor-binding protein GGA2 yes yes 0 0 0 7 0 1 60.188 60.234 3 0.00018096 17880 20230619_1887_Aki_TMTPro18x_K_F7 85.982 68.281 51714 44555 51816 53035 43721 59627 62157 56244 69777 63995 61650 63925 71084 59300 65760 68451 68114 71575 47835 40856 52538 52959 46637 59693 61822 57914 70321 64279 64073 64734 71992 61821 67107 68811 65172 67937 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33361000 17619 4672 16699 33415 26771 26771 1 9606 Homo sapiens 0.020861444557340292 LTFQAGDPYYISK Unmodified 1501.7453 0.74529545 4759 Q9Y6K1;Q59HC6;F8WE91 DNMT3A DNA (cytosine-5)-methyltransferase 3A yes no 0 0 0 1 0 1 60.375 60.375 3 5.7677E-06 18650 20230619_1880_Aki_TMTPro18x_K_F1 123.02 102.65 36302 26531 37922 37145 25920 35728 33658 34964 41853 46073 45647 41990 51521 39867 41709 51340 40301 45139 33558 24386 38207 36621 28145 36195 33771 36069 42348 45841 46876 42760 51892 41815 42564 51034 38607 42921 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58034000 17620 4759 16700 33416 26772 26772 1 9606 Homo sapiens 0.01449261249376832 LTFSCLGGSDNFK Unmodified 1444.6657 0.66566492 647 A0A024RB32;Q15185-4;Q15185;A0A087WYT3;B3KUY2;Q15185-3;Q15185-2 PTGES3 Prostaglandin E synthase 3 yes no 0 0 0 3.67 3.09 1 1 1 60.21 60.226 2;3 3.0144E-29 18593 20230619_1880_Aki_TMTPro18x_K_F1 334.79 266.42 523070 441540 467620 474540 404240 487430 481360 469990 512740 626020 575900 572710 695930 558210 518440 735020 626190 670430 483340 404530 478750 476940 427420 491640 482060 485550 523820 622550 592990 583500 697840 585770 537470 731500 598400 637300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 827800000 17621 647 16701 33417;33418;33419 26773;26774;26775;26776 26774 4 9606 Homo sapiens -0.03888128696280546 LTFVGELAHGR Unmodified 1198.6459 0.64585618 1338 Q9UKM7;A0A291FGE6;A0A804HHU1;H0YG20;A0A804HL65;A0A804HK86;A0A804HJ66;A0A804HL61;B4DR05;A0A804HJ23;A0A804HKS1;A0A804HK01;H0YGQ1;H0YGV7;H0YI64;B4DPS9;B3KQC5;B3KXZ1;Q9UFZ8 MAN1B1;DKFZp434I213 Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase;alpha-1,2-Mannosidase yes no 0 0 0 1.5 0.5 1 1 51.398 51.421 3 4.849E-09 14984 20230619_1880_Aki_TMTPro18x_K_F1 154.66 117.64 9429.3 8273.8 12061 10803 9058.4 13357 12183 12094 12919 14546 12609 11461 12588 12149 12554 12643 12931 17050 8743.1 7593.5 11985 10737 9748.3 13274 12131 12504 13118 14476 12946 11797 12856 12542 12789 12943 12397 16132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54527000 17622 1338 16702 33420;33421 26777 26777 1 9606 Homo sapiens 0.054479081459248846 LTGADGTPPGFLLK Unmodified 1385.7555 0.7554662 3104 I3L1P8;Q6IBH0;Q02978;Q02978-2 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 1.5 0.5 1 1 61.596 61.601 3 0.0131 19154 20230619_1880_Aki_TMTPro18x_K_F1 63.181 45.449 46322 40150 48243 58790 42510 51263 54894 53897 62600 56172 58573 51381 59064 44362 49072 64346 59249 62820 42863 36898 48834 57712 44973 52441 54872 54963 63151 56508 60247 52192 59761 47082 50724 64202 56616 59670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190790000 17623 3104 16703 33422;33423 26778 26778 1 9606 Homo sapiens 0.078018689746159 LTGAGGGGCGITLLKPGLEQPEVEATK Unmodified 2652.3793 0.37926631 2323 F5H8H2;B7Z301;B2RDU6;Q59ET9;Q03426;A0A1B0GWC2;B7Z1C2;A0A0B4J236 MVK Mevalonate kinase yes no 0 0 1 8 0 1 59.41 59.452 4 0.017631 17609 20230619_1888_Aki_TMTPro18x_K_F8 52.465 46.672 7741.7 9525.8 12756 11849 13062 21746 15978 14969 20210 13200 12521 11115 11273 11182 13629 10595 11823 13523 7219.4 8729.4 12554 11900 13671 21059 16062 15706 20019 13395 13149 11382 11669 11502 13702 10831 11341 12807 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13738000 17624 2323 16704 33424 26779 26779 1 9606 Homo sapiens 0.11917184589810859 LTGEDVFGITVPLITSTTGAK Unmodified 2119.1413 0.14125109 3046 H0YHS6;Q9Y2Z4 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial yes no 0 0 0 2 0 1 65.191 65.198 3 7.7628E-12 20900 20230619_1881_Aki_TMTPro18x_K_F2 137.05 123.85 8922.3 9806.8 9398.1 12606 10680 10263 10822 11702 12178 14610 12476 14138 15553 12708 13346 14820 15599 17872 8271.5 8992.7 9544.1 12467 10982 10594 10948 11935 12362 14589 12933 14316 15669 13278 13742 15025 14919 16934 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23979000 17625 3046 16705 33425 26780 26780 1 9606 Homo sapiens 0.12644611789710325 LTGMAFR Unmodified 794.41089 0.4108942 3382;4086 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q0QET7;A4UCT1;A0A0K0K1K1;O14556;Q5ZEY3 HEL-S-162eP;GAPDH;GAPDHS;GAPD Glyceraldehyde-3-phosphate dehydrogenase;Glyceraldehyde-3-phosphate dehydrogenase, testis-specific no no 0 0 0 3.5 1.12 1 1 1 1 48.996 49.06 2 0.0044667 13524 20230619_1883_Aki_TMTPro18x_K_F4 148.07 124.28 8843400 7194600 7582800 7270700 7168400 10202000 8846400 8540600 10734000 4318500 3738700 3112900 3710400 2793300 6306800 4265500 4482600 3022400 8167300 6589000 7803000 7379000 7547600 10052000 8875200 8726100 10528000 4567600 4166000 3210900 3911100 2970600 6254900 4200100 4296400 2889200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 14788000000 17626 3382;4086 16706 33426;33427;33428;33429 26781;26782;26783 26783 3 9606 Homo sapiens 0.005465191366852196 LTGPAAAEPR Unmodified 981.52434 0.52434406 3109 I3L380;Q8N2K0;Q8N2K0-2 ABHD12 Monoacylglycerol lipase ABHD12 yes no 0 0 0 4.5 0.5 1 1 38.399 38.466 2 0.0058025 8896 20230619_1885_Aki_TMTPro18x_K_F5 98.249 69.737 27545 22903 29569 30775 36325 36503 33497 32974 43007 38613 42403 43752 34225 34084 36383 36820 47675 41468 25488 21030 29973 30501 37101 36403 34231 34082 43236 38887 43186 43835 35341 35602 37582 37220 45463 39360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66481000 17627 3109 16707 33430;33431 26784 26784 1 9606 Homo sapiens 0.03284285783411178 LTGRDPNDVRPIQAR Unmodified 1706.9176 0.91761436 4506 Q9H307;A8K964;G3V5F0;G3V579 PNN Pinin yes no 0 0 2 1.5 0.5 1 1 35.698 35.727 4 1.3289E-10 8251 20230619_1880_Aki_TMTPro18x_K_F1 160.63 141.37 116880 80402 81896 113140 117820 112570 101490 122780 135660 125870 144640 153240 164150 126020 97763 169660 187610 163700 107700 73924 86796 111500 119120 114130 104380 124770 136630 127860 148770 153460 163760 133220 105920 169230 178470 155630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 332040000 17628 4506 16708 33432;33433 26785 26785 1 9606 Homo sapiens 0.09243225709474245 LTGSLSGWSSPK Unmodified 1218.6245 0.62445203 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;A0A7I2V614;A0A7I2V538;A0A7I2V6A6;A0A7I2V3C8;A0A7I2V5W7;A0A7I2V4I8 ACO2 Aconitate hydratase, mitochondrial yes no 0 0 0 4.5 1.12 1 1 1 1 55.672 55.723 2 1.4825E-23 16443 20230619_1883_Aki_TMTPro18x_K_F4 247.22 197.39 50071 41905 49293 54724 57746 78531 67262 72967 74803 67509 68862 74884 75973 63141 71131 72643 76106 76379 46300 38466 50330 54509 59686 77416 67497 74738 75532 68749 71294 75275 77078 66030 72697 73058 72771 72504 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80244000 17629 1050 16709 33434;33435;33436;33437 26786;26787 26787 2 9606 Homo sapiens 0.02388478326565746 LTGVFAPR Unmodified 859.49159 0.49158736 2202 Q96IR1;B2R491;P62701;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6;B7Z1M6 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 0 0 0 4 0.816 1 1 1 50.836 50.895 2 0.010549 14354 20230619_1883_Aki_TMTPro18x_K_F4 98.457 43.932 1960000 1367800 1533800 1849700 1712300 3077200 2102700 2126300 3401200 1241200 1089000 846420 968900 807300 1378600 1166100 1035700 676400 1807400 1257000 1599900 1842700 1788100 2992400 2134900 2213300 3291800 1295400 1219800 877660 1013000 852650 1374500 1139600 991740 648950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1262000000 17630 2202 16710 33438;33439;33440 26788 26788 1 9606 Homo sapiens 0.05622123451234984 LTGVIVENENITK Unmodified 1428.7824 0.78240924 3035 Q8NFC6;H0Y9Y2 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes no 0 0 0 6 0 1 56.162 56.236 3 0.052016 16542 20230619_1886_Aki_TMTPro18x_K_F6 44.366 14.893 57839 49145 61369 63641 74344 72301 69610 74346 69877 72495 71095 64193 68402 59739 73752 75801 68516 68343 53522 45105 62244 63196 75966 72519 70496 75732 71267 73094 72748 65434 70154 62610 74627 75498 65605 64992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34040000 17631 3035 16711 33441 26789 26789 1 9606 Homo sapiens 0.08516932795146204 LTHDVELNLDYER Unmodified 1615.7842 0.78420015 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 2.8 1.17 1 1 1 2 50.545 50.583 2;3 3.7192E-46 14336 20230619_1882_Aki_TMTPro18x_K_F3 258.02 225.95 88561 59569 81044 82166 73816 83587 78294 71263 88248 81729 75402 69945 91078 69890 73367 87989 86617 73348 81742 54763 82841 81123 77412 84120 79004 73973 88857 81719 78608 71572 91580 73078 75721 87276 82655 69870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1253200000 17632 1817 16712 33442;33443;33444;33445;33446 26790;26791 26790 2 9606 Homo sapiens 0.0009394181306561222 LTHELEK Unmodified 868.46543 0.46543219 2857 Q3V6T2;D6W5D1;Q3V6T2-2;A0A2U3TZV9;A0A2R8Y7B1;Q3V6T2-3;Q3V6T2-4;Q3V6T2-5;A0A2R8YG73;A0A2R8Y4X4;A0A2R8Y4W8;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y885;A0A2R8YDS8;A0A2R8Y7D4;H7C2C6;A0A2R8YGU1 CCDC88A;KIAA1212 Girdin yes no 0 0 0 4 0 1 40.292 40.334 3 0.0016072 9680 20230619_1883_Aki_TMTPro18x_K_F4 133.55 9.469 78527 39323 71767 89109 101120 100570 95988 89173 117480 92724 122330 116820 111410 98279 100170 72287 125090 116740 72384 36467 74005 85920 102530 100500 97707 92023 118540 94314 124750 116820 113550 100660 103260 75655 119390 110440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35978000 17633 2857 16713 33447 26792 26792 1 9606 Homo sapiens 0.025938094890989305 LTHELPGIK Unmodified 1006.5811 0.58113065 2952 F2Z2A4;H7C1J2;H7C1M5;Q9H147 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 yes no 0 0 0 8 0 1 46.925 46.974 3 0.0032003 12257 20230619_1888_Aki_TMTPro18x_K_F8 82.749 51.676 64832 47469 57404 64623 58008 66639 65883 68331 91756 70513 79282 80329 80902 67834 73184 89940 86465 88186 59852 43616 58987 63867 60502 67251 66766 69752 91432 71485 81996 80719 82166 71548 75381 89876 82613 83772 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33713000 17634 2952 16714 33448 26793 26793 1 9606 Homo sapiens 0.07810333339944009 LTHVDSPLEAPAGPLGQVK Unmodified 1928.0367 0.036726442 644 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8;Q9BSJ8-2 FAM62A;ESYT1 Extended synaptotagmin-1 yes no 0 0 0 8 0 1 54.967 55.033 3 1.1979E-14 15745 20230619_1888_Aki_TMTPro18x_K_F8 156 138.72 32742 21076 31979 36700 30842 38104 36182 31799 41653 48206 45155 41550 48963 43923 38581 52329 47287 50918 30229 19436 32566 35762 32307 38251 36338 33376 42304 47646 46295 42575 49378 45672 39973 52331 45184 48364 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61356000 17635 644 16715 33449 26794 26794 1 9606 Homo sapiens 0.10982954823634827 LTHYHEGLPTTR Unmodified 1423.7208 0.72081203 2219 B4DGN8;B2R5M9;Q02809;Q02809-2;B4DHT1 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes no 0 0 0 7.5 0.5 1 1 35.389 35.419 4 3.3582E-05 7507 20230619_1887_Aki_TMTPro18x_K_F7 93.772 80.093 87451 37876 94994 96186 145060 123180 112900 130730 113950 87459 111450 112830 107300 83736 102530 76318 125400 107570 80684 35236 96582 92606 145520 122650 115780 131810 115870 91462 114310 112390 109380 87010 105450 78655 119640 101900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187950000 17636 2219 16716 33450;33451 26795 26795 1 9606 Homo sapiens 0.02590045886495318 LTHYHEGLPTTWGTR Unmodified 1767.8693 0.86926718 3283 O60568;B3KQQ3;Q9UG85;H7C2S8 PLOD3;DKFZp564O1822 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes no 0 0 0 1.5 0.5 1 1 43.96 44.002 4 0.0014363 11922 20230619_1880_Aki_TMTPro18x_K_F1 74.789 69.296 26093 15064 21800 25277 28204 26015 27217 27148 30901 30784 32291 30871 33791 27177 28996 31974 37970 33085 24050 13893 22613 24681 28736 26276 27613 27754 31338 30917 33118 31215 34209 28420 30078 32109 36209 31430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142050000 17637 3283 16717 33452;33453 26796 26796 1 9606 Homo sapiens 0.016047320695179224 LTIAEER Unmodified 830.44978 0.44978213 2202 Q96IR1;B2R491;P62701;Q53HV1;Q8TD47 RPS4X;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 0 0 0 2.5 0.5 1 1 41.748 41.818 2 0.0010719 10361 20230619_1882_Aki_TMTPro18x_K_F3 172.97 40.446 797550 592450 696880 777740 848850 1046200 894760 849100 1220200 948600 984800 1068600 1114500 927900 927180 1078300 1148100 1073400 736280 544120 719270 773370 872600 1032600 909060 883750 1214600 957870 1027500 1074400 1124700 969740 959080 1080600 1095900 1019800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1959499999.9999998 17638 2202 16718 33454;33455 26797;26798 26798 2 9606 Homo sapiens 0.027775229720418793 LTIAEERDK Unmodified 1073.5717 0.57168818 2202 Q96IR1;B2R491;P62701;Q53HV1;Q8TD47 RPS4X;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 0 0 1 3.5 0.5 1 1 40.951 41.002 2;3 0.00050889 9946 20230619_1883_Aki_TMTPro18x_K_F4 161.27 123.11 907560 705170 767010 752620 1046000 885780 918570 998840 1155100 949590 1055800 889970 1036300 833090 821390 1191400 1217100 909660 837860 646230 794580 758550 1059600 889150 940940 1010700 1158900 960790 1085600 905660 1048200 880000 862810 1174600 1158600 868110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 864080000 17639 2202 16719 33456;33457 26799;26800 26800 2 9606 Homo sapiens 0.03784520263752711 LTIGSNLSIR Unmodified 1072.6241 0.6240581 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 4 0.816 1 1 1 53.179 53.229 2 0.0013774 15160 20230619_1885_Aki_TMTPro18x_K_F5 108.15 22.414 153310 130880 144270 150870 139200 157710 154470 158810 177940 112470 114790 95622 99496 86746 125740 104060 113820 101190 141730 119990 147270 150860 145480 158990 155590 160930 177210 115740 120010 97642 103310 90698 126610 104210 108930 96190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 817940000 17640 3444 16720 33458;33459;33460 26801 26801 1 9606 Homo sapiens 0.09065103397369967 LTIHAPPQELGPPVQR Unmodified 1751.9683 0.96825295 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 8 0 1 48.04 48.098 3 5.9192E-11 12666 20230619_1888_Aki_TMTPro18x_K_F8 123.68 105.87 105260 83406 106260 106100 94054 92940 106500 108380 99620 109100 107000 103840 123660 99364 120370 124680 125390 120720 97317 76556 107660 105150 98864 95368 106520 109690 102250 110010 110190 105560 125480 104020 122750 124650 119890 114720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84555000 17641 3440 16721 33461 26802 26802 1 9606 Homo sapiens 0.12234755034432965 LTIPSSCPR Unmodified 1029.5277 0.52771487 2098 D4Q8H0;A8K710;Q9NYL2-3;Q9NYL2-2;Q9NYL2;B4DQ47 pk;ZAK Mitogen-activated protein kinase kinase kinase MLT yes no 0 0 0 1.5 0.5 1 1 44.37 44.411 2 0.0018122 11878 20230619_1881_Aki_TMTPro18x_K_F2 117.81 66.476 74346 62653 69108 72988 84125 86273 87905 83776 97782 86648 91103 90659 103270 83888 90401 104490 109370 99809 68719 57444 70887 73051 86255 86202 88696 85837 98782 87565 94317 91666 104400 87856 93270 104380 104390 94884 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78494000 17642 2098 16722 33462;33463 26803 26803 1 9606 Homo sapiens 0.014132125657852157 LTIQGLK Unmodified 771.48544 0.48543935 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;B4DEC3;Q71UF1;B4DW08;O75944 ACO2;ACON Aconitate hydratase, mitochondrial yes no 0 0 0 3 0 1 53.576 53.629 3 0.0097901 15763 20230619_1882_Aki_TMTPro18x_K_F3 94.262 17.415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17643 1050 16723 33464 26804 26804 1 9606 Homo sapiens 0.09055605219725749 LTISSPLEAHK Unmodified 1194.6608 0.66083754 3931 Q15393;A8K6V3;Q15393-2 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 4.5 3.5 1 1 49.281 49.317 3 7.4954E-07 13247 20230619_1888_Aki_TMTPro18x_K_F8 164.04 114.69 162840 153480 163030 186970 188280 220610 186610 192040 202140 179130 191130 195860 182770 151160 172450 190450 197230 201990 150720 140720 166130 186470 193620 219840 188770 197820 204580 182260 196300 196570 186310 159510 177010 191350 188500 191710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 565660000 17644 3931 16724 33465;33466 26805;26806 26806 2 9606 Homo sapiens 0.0712935522326461 LTLADIER Unmodified 929.5182 0.51819605 2357 B3KMV8;O75746-2;O75746 SLC25A12 Calcium-binding mitochondrial carrier protein Aralar1 yes no 0 0 0 4 0 1 53.504 53.523 2 0.010397 15604 20230619_1883_Aki_TMTPro18x_K_F4 98.904 36.245 116010 113460 123860 140820 128780 157180 157480 150270 178410 116290 108580 104120 134660 109190 119060 130500 119980 115900 107460 104040 125390 140160 134250 157490 157690 153120 177620 119120 115820 106520 135860 113610 121460 129960 114760 110250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233970000 17645 2357 16725 33467 26807 26807 1 9606 Homo sapiens 0.05061767551910634 LTLDTIFVPNTGK Unmodified 1417.7817 0.78168095 4704 Q9Y277;Q9Y277-2;E5RFP6;E5RJN6;E5RHZ6;E5RK27 VDAC3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 2 0 1 62.944 62.953 3 5.8172E-08 19945 20230619_1881_Aki_TMTPro18x_K_F2 155.47 100.93 432880 386430 460290 612100 556630 720260 615190 610990 675710 525150 621220 600370 724050 590910 556790 662080 551940 589990 400710 355440 467900 600350 572860 716960 618610 629570 682290 538060 644170 606210 727490 613550 569450 659950 528410 561000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 653420000 17646 4704 16726 33468 26808 26808 1 9606 Homo sapiens 0.08950138146087738 LTLFHIEQGK Unmodified 1184.6554 0.65535823 323 A0A024R573;Q7L266;Q9BRH2;B3KR33;Q7L266-2 ASRGL1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes no 0 0 0 1.5 0.5 1 1 54.32 54.332 3 0.00013995 16306 20230619_1881_Aki_TMTPro18x_K_F2 122.7 88.167 114750 96160 113640 122370 68637 83651 97551 96203 102580 138010 168940 166150 156410 138920 156340 159300 147110 178880 106120 88244 114900 120940 75687 87821 96973 98627 106900 138000 169660 166480 160000 145260 158500 160850 141060 169570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43130000 17647 323 16727 33469;33470 26809 26809 1 9606 Homo sapiens 0.07041676431481392 LTLFVNGQPR Unmodified 1143.64 0.64004252 1631 Q92734;Q92734-2;A0A6Q8PFY7;Q7Z426;Q92734-3;A0A6Q8PG04;A0A6Q8PF40;Q05BK6;Q7Z427;A0A6Q8PGS4;Q8TDJ5;A0A6Q8PG00;A0A6Q8PH27;A0A6Q8PH89;A0A6Q8PFC4;Q92734-4;C9JJP5;C9JUE0;A0A6Q8PF51;C9JTY3 TFG;TFG/ALK fusion Protein TFG;Tyrosine-protein kinase receptor yes no 0 0 0 5 0 1 55.305 55.369 2 0.0019046 16019 20230619_1885_Aki_TMTPro18x_K_F5 100.02 65.939 41419 32758 39180 47032 38500 51109 44137 46615 57068 55432 57311 57326 59375 49539 55697 57843 56003 62627 38274 30108 40035 46349 40289 51233 44585 48165 57416 55615 58878 57841 60347 51811 56732 58257 53626 59408 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28141000 17648 1631 16728 33471 26810 26810 1 9606 Homo sapiens 0.07396809634292367 LTLHGLQQYYVK Unmodified 1461.798 0.79799972 724;3204 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;H0Y400;H0YCC6;O00148;B4DX78;O00148-2;Q69YT6 DDX39B;hCG_2005638;DDX39A;DKFZp547B159 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A no no 0 0 0 4 0 1 54.937 54.948 3 9.8423E-10 16178 20230619_1883_Aki_TMTPro18x_K_F4 174.42 155.1 424290 397300 449800 408060 414310 546060 489520 474320 541580 212160 196800 128270 187700 129160 382660 151280 162450 102990 392880 363720 454160 413300 435810 539920 490660 482480 533950 226570 217760 134450 200850 134530 372220 149750 157150 98547 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 793840000 17649 724;3204 16729 33472 26811 26811 1 9606 Homo sapiens 0.08557264102864792 LTLIDPETLLPR Unmodified 1379.8024 0.8024164 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 4.5 3.5 1 1 64.483 64.493 2 4.4247E-10 19690 20230619_1888_Aki_TMTPro18x_K_F8 228.64 160.62 637160 517510 564050 622830 485980 642910 623540 647290 706310 796520 639450 654360 900420 680620 506120 984100 695090 868280 588580 474700 578380 620660 515750 648490 623430 664810 713180 792600 670280 671990 891540 717670 534750 976020 664430 825290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 897170000 17650 2126 16730 33473;33474 26812;26813;26814 26813 3 9606 Homo sapiens 0.12770728525742925 LTLISEDIK Unmodified 1030.591 0.59102664 2028 P18031;A8K3M3;B4DSN5 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type yes no 0 0 0 5.5 0.5 1 1 59.839 59.896 3 1.735E-08 18070 20230619_1886_Aki_TMTPro18x_K_F6 172.23 133.94 52500 45689 46028 58320 45874 59457 56546 60592 67341 60964 65945 61025 64909 52310 64375 72267 64165 70336 48515 41924 47383 57857 48046 60034 56736 61827 67906 61598 67653 61702 66233 55316 65507 72166 61437 66803 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169080000 17651 2028 16731 33475;33476 26815 26815 1 9606 Homo sapiens 0.07695476554636116 LTLLHYDPVVK Unmodified 1296.7442 0.74417324 3303 O75394 MRPL33 39S ribosomal protein L33, mitochondrial yes yes 0 0 0 2 0 1 56.604 56.623 3 4.0601E-05 17243 20230619_1881_Aki_TMTPro18x_K_F2 134.13 88.969 134650 105940 126650 155810 144970 173690 171310 185160 173620 172340 158610 150930 196160 164910 135080 191930 179090 184930 124410 97403 129810 153410 149930 174430 171280 187950 176240 174200 164990 154770 196140 171120 141180 191880 170970 175700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162780000 17652 3303 16732 33477 26816 26816 1 9606 Homo sapiens 0.10767091671095841 LTLLNPK Unmodified 797.50109 0.50108942 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 3.5 0.5 1 1 54.929 54.958 2 0.023523 16159 20230619_1883_Aki_TMTPro18x_K_F4 100.45 9.4098 488860 426520 478720 437780 410600 456050 438130 388670 474850 461630 455520 384130 456380 371880 482060 519730 524460 344120 452150 390570 485800 441750 432680 458510 441460 403880 481000 460430 467970 393480 466950 391680 492220 510050 500140 329370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 936920000 17653 161 16733 33478;33479 26817 26817 1 9606 Homo sapiens 0.09423891736764745 LTLPHSIR Unmodified 935.55525 0.55525025 3325 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 0 3.5 0.5 1 1 42.916 42.971 3 3.8813E-06 10804 20230619_1883_Aki_TMTPro18x_K_F4 169.57 117.17 137370 114350 130310 142020 138150 155110 150840 159350 155590 142190 125660 129510 148690 113610 141470 152180 148310 129860 126980 104910 133150 141330 143230 155930 151520 162010 157100 144220 131410 131550 150610 119790 144410 151040 141710 123650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 487440000 17654 3325 16734 33480;33481 26818;26819 26819 2 9606 Homo sapiens 0.08489483888320137 LTLQEFQEGSK Unmodified 1278.6456 0.6455814 509 A0A024R8B2;P62166-2;P62166 FREQ;NCS1 Neuronal calcium sensor 1 yes no 0 0 0 5.5 0.5 1 1 55.461 55.525 2;3 0.0054305 16268 20230619_1886_Aki_TMTPro18x_K_F6 101.56 80.183 93887 65381 87956 85753 89548 106300 97038 93472 126870 90881 101150 105540 117750 102100 95450 112470 106870 105750 86688 60063 89861 85193 93212 105610 98311 96319 126420 92537 105720 106390 118620 105950 98175 112450 102130 100520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106570000 17655 509 16735 33482;33483 26820;26821 26821 2 9606 Homo sapiens 0.01740443635412703 LTLQPVDNSTISLQMGTNK Oxidation (M) 2075.0569 0.056869537 3933 Q15417;Q15417-3;Q15417-2 CNN3 Calponin-3 yes no 0 1 0 1.5 0.5 1 1 57.946 57.954 3 2.1112E-11 17652 20230619_1880_Aki_TMTPro18x_K_F1 143.99 130.56 254700 240120 226950 228640 176350 194480 172240 175110 189790 272480 285530 220710 244490 201770 207820 277560 236830 236190 235520 219690 232020 231600 187180 199050 174740 182900 196470 268450 286140 225980 249000 212790 213970 275180 226310 224780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 760120000 17656 3933 16736 33484;33485 26822 26822 2613 1 9606 Homo sapiens 0.0623433770133488 LTLQTTSDGVMLDK Unmodified 1520.7756 0.7756093 3339 O94925-3;A8K132;O94925;Q53TX0 GLS Glutaminase kidney isoform, mitochondrial yes no 0 0 0 7 0 1 58.65 58.699 3 0.0016802 17275 20230619_1887_Aki_TMTPro18x_K_F7 64.52 48.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17657 3339 16737 33486 26823 26823 1 9606 Homo sapiens 0.03605251852263791 LTLSALLDGK Unmodified 1029.607 0.60701105 1286 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 0 2.33 0.471 2 1 63.109 63.126 3 0.00013418 19904 20230619_1881_Aki_TMTPro18x_K_F2 123.75 0 507430 479460 555950 679970 674690 796220 675290 668510 776520 643140 603100 599120 716380 594110 695740 615390 588280 554300 470030 440340 563360 671240 691770 793040 683820 691160 778430 650450 632050 609990 726350 614160 701430 615080 563670 527250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2348500000 17658 1286 16738 33487;33488;33489 26824;26825 26824 2 9606 Homo sapiens 0.09339182791586609 LTLSALVDGK Unmodified 1015.5914 0.59136099 62 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;P45880-2;P45880-1;B4DKM5 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 1.5 0.5 1 1 61.918 61.923 3 4.7966E-05 19434 20230619_1881_Aki_TMTPro18x_K_F2 139.43 103.89 180670 166240 192410 224570 201550 242130 233040 233370 246620 223210 247650 238790 265080 214990 231550 222990 201820 206920 167280 152600 194860 222150 209570 243210 233580 238770 250440 226630 254740 240920 268240 222980 234360 223150 193430 196690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1119700000 17659 62 16739 33490;33491 26826 26826 1 9606 Homo sapiens 0.08418896274531562 LTLSQFQK Unmodified 963.53893 0.53893149 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 3.5 0.5 1 1 54.635 54.667 3 0.00038463 16225 20230619_1882_Aki_TMTPro18x_K_F3 128.61 100.53 116250 103320 110390 115590 130390 148480 128980 131770 155490 69678 65792 52349 65018 49559 101720 76939 64552 50028 107510 94678 112960 116180 133900 147260 130890 134090 153080 73391 71690 53976 68100 52660 100600 75458 62022 47856 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200870000 17660 4222 16740 33492;33493 26827 26827 1 9606 Homo sapiens 0.05570357931571834 LTLTFNR Unmodified 863.4865 0.48650199 2521;3555 P36542-2;B4DL14;Q8TAS0;P36542 ATP5C1 ATP synthase subunit gamma, mitochondrial;ATP synthase subunit gamma no no 0 0 0 3.5 0.5 1 1 52.038 52.082 2 0.0069693 14916 20230619_1883_Aki_TMTPro18x_K_F4 128.86 100.29 810370 757350 742930 754600 892380 1101600 921810 948070 1186600 304200 296840 200090 189920 159000 575540 218460 223760 159100 749480 693180 762830 767220 917400 1083900 935200 961640 1155400 340500 341860 207280 215670 168530 557060 216430 217040 151980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 564640000 17661 2521;3555 16741 33494;33495 26828 26828 1 9606 Homo sapiens 0.049298195886080975 LTLYDIAHTPGVAADLSHIETK Unmodified 2364.2325 0.23252572 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 7.33 0.471 2 1 75.636 75.658 4 1.0325E-45 18439 20230619_1887_Aki_TMTPro18x_K_F7 251.69 234.97 757940 673090 729650 880030 707860 812210 819260 804950 805040 989880 1013200 1094600 1018100 1012200 1035500 1157900 863230 1306500 701000 617730 744190 870590 740060 826230 819480 828150 830040 993330 1030800 1103500 1040300 1054000 1044000 1169200 830660 1237700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 9437100000 17662 297 16742 33496;33497;33498 26829;26830;26831 26829 3 9606 Homo sapiens 0.10497875487089914 LTMPYEVLVK Acetyl (Protein N-term);Oxidation (M) 1249.6628 0.66281137 4805 yes yes 1 1 0 7 0 2 46.927 47.015 2 0.066014 12203 20230619_1887_Aki_TMTPro18x_K_F7 53.472 33.859 + 83454 73288 105070 106310 122030 150970 120480 102870 74676 94052 97639 127240 148230 79870 107830 159480 139090 163150 77369 67342 105230 105150 125310 148080 120180 108250 79761 96473 101530 126110 147470 88353 112380 158980 132950 154840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 128670000 17663 4805 16743 33499;33500 26832 26832 2917 1 9606 Homo sapiens 0.04796647916850816 LTNAEGVEFK Unmodified 1106.5608 0.56078914 3327 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;O76094-2;Q71V07 HEL103;SRP72 Signal recognition particle subunit SRP72 yes no 0 0 0 4.5 0.5 1 1 51.575 51.627 2 0.00069914 14761 20230619_1883_Aki_TMTPro18x_K_F4 135.8 90.165 166170 137750 162490 173440 173150 194780 184390 191780 221910 206310 215060 227480 228150 183980 199140 228150 254740 242670 153640 126400 165600 172500 179390 195260 186460 196500 223670 208370 221610 228470 231050 193610 206230 229280 243110 230380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 296420000 17664 3327 16744 33501;33502 26833;26834 26833 2 9606 Homo sapiens 0.011771178894832701 LTNLEEFMAANNNLELVPESLCR Unmodified 2676.2887 0.28873674 3831 Q13045-2;Q13045;J3KS54;Q59H95;B4DIX0;Q13045-3;J3QQQ2;A0A1W2PNT9;B4DNA8 FLII Protein flightless-1 homolog yes no 0 0 0 7 0 1 65.536 65.561 3 0.02077 20321 20230619_1887_Aki_TMTPro18x_K_F7 56.453 47.959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17665 3831 16745 33503 26835 26835 1 9606 Homo sapiens 0.017643922698880488 LTNLQEGIIPK Unmodified 1224.7078 0.70778773 1368 B3KRT9;H7BXF5;A0A2R8YDB8;Q9H0E3-2;Q9H0E3;Q9H0E3-3 SAP130 Histone deacetylase complex subunit SAP130 yes no 0 0 0 1 0 1 58.183 58.183 3 0.069944 17757 20230619_1880_Aki_TMTPro18x_K_F1 51.774 16.887 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17666 1368 16746 33504 26836 26836 1 9606 Homo sapiens 0.10442214774434433 LTNSMMMHGR 3 Oxidation (M) 1224.5049 0.5049473 300 M0R0F0;A0A024R4Q8;M0R0R2;P46782;Q53G25;Q59EK8 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 0 3 0 5 0 2 26.352 26.423 3 0.044349 4532 20230619_1885_Aki_TMTPro18x_K_F5 41.283 35.18 7344.8 5764.3 8873.9 8183.6 9950.9 11692 8611 8457.9 14076 2524.9 4640.3 2492.4 2085.4 3251.4 5122.5 3661.4 3304.9 0 6801.5 5297.5 8899.2 8108.2 10228 11477 8923.1 8706.7 13610 2897.3 5081.6 2574.7 2367.4 3336.8 5046.4 3475.5 3156.8 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 3824500 17667 300 16747 33505;33506 26837;26838 26837 185;186;187 2 9606 Homo sapiens -0.09832497885645353 LTNVAATSGDGYR Unmodified 1323.6419 0.64189301 2554 B4DNM8;Q32P28-4;Q32P28;Q32P28-3;H7C2W6 LEPRE1 Prolyl 3-hydroxylase 1 yes no 0 0 0 6 0 1 43.382 43.476 2 0.0096445 10989 20230619_1886_Aki_TMTPro18x_K_F6 76.24 62.862 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17668 2554 16748 33507 26839 26839 1 9606 Homo sapiens -0.006982261384337107 LTPADKAEHMK Unmodified 1239.6282 0.6281572 2161 Q68CX8;A8KAQ6;B4E3W1;Q9Y679-3;Q9Y679 DKFZp686P12272;AUP1 Ancient ubiquitous protein 1 yes no 0 0 1 7.5 0.5 1 1 41.343 41.377 4 0.070265 9843 20230619_1887_Aki_TMTPro18x_K_F7 54.65 45.6 28209 25881 30899 32721 36914 30284 30868 32296 39371 32430 34951 31104 29717 25221 39861 27850 32966 26191 26125 23742 31248 32455 37628 30886 31747 32862 39437 32735 35832 31440 30970 26348 39905 27896 31561 24919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23901000 17669 2161 16749 33508;33509 26840 26840 1 9606 Homo sapiens 0.017928248287489623 LTPEDFAR Unmodified 947.47125 0.47124585 851 A0A087WY55;Q9NP79;Q5TGM0;Q9NP79-2 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes no 0 0 0 4.5 0.5 1 1 49.534 49.589 2 0.0041912 13799 20230619_1883_Aki_TMTPro18x_K_F4 117.18 78.34 367680 284820 281350 362380 327150 382270 354520 330150 420840 420140 406560 419020 444340 354190 387010 461210 449060 459180 339210 261450 294190 359680 337400 383810 357810 343420 424570 419810 419510 423200 449470 373290 398380 461410 429130 436110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254300000 17670 851 16750 33510;33511 26841 26841 1 9606 Homo sapiens -0.004590919992438103 LTPEEEEILNK Unmodified 1313.6715 0.6714618 3707 Q5JR94;P62241;Q5JR95;Q9BS10 RPS8 40S ribosomal protein S8 yes no 0 0 0 2.4 1.02 1 2 1 1 57.358 57.372 2;3 3.0358E-34 17510 20230619_1881_Aki_TMTPro18x_K_F2 250.75 196.97 404400 364200 438990 419030 373800 448880 469660 416010 453190 505330 474210 445570 526980 428360 434590 567280 453630 465890 374440 333800 442040 419230 396030 450910 467540 429800 463810 504060 487650 454680 531600 449780 445350 561790 433930 443540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3034199999.9999995 17671 3707 16751 33512;33513;33514;33515;33516 26842;26843;26844;26845 26843 4 9606 Homo sapiens 0.02717293087039252 LTPEEEEILNKK Unmodified 1441.7664 0.76642482 3707 Q5JR94;P62241;Q5JR95;Q9BS10 RPS8 40S ribosomal protein S8 yes no 0 0 1 4.5 0.5 1 1 54.417 54.459 3 1.9192E-05 15960 20230619_1883_Aki_TMTPro18x_K_F4 124.21 111.33 361250 301790 312520 334850 275170 328020 367210 361130 346830 367660 349220 307180 410410 323490 295660 408240 357040 327850 333710 276590 321150 335530 291430 333010 364340 366820 354770 369310 360500 315430 411330 337690 306660 404080 340820 312360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1468099999.9999998 17672 3707 16752 33517;33518 26846;26847 26846 2 9606 Homo sapiens 0.06321226558225135 LTPEELER Unmodified 985.50803 0.50802529 1888 A0AVP6;Q5H8X8;O95399;O95399-2 UTS2 Urotensin-2 yes no 0 0 0 1.5 0.5 1 1 44.077 44.118 2 0.00083436 11871 20230619_1880_Aki_TMTPro18x_K_F1 155.03 0 580240 456730 517430 550550 644830 669860 671530 660610 812460 764380 767160 796060 791940 652170 692230 909030 850580 813590 535930 419000 532970 549920 660410 668240 679720 678160 817980 767960 790420 801970 802790 690970 715600 903370 812050 773900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2227700000 17673 1888 16753 33519;33520 26848;26849 26848 2 9606 Homo sapiens 0.014691598266608707 LTPEQLHSMR Oxidation (M) 1226.6078 0.60775611 172 K7EPV0;A0A024R1X4;Q9Y2R0 COA3;hCG_16955 Cytochrome c oxidase assembly factor 3 homolog, mitochondrial yes no 0 1 0 6 0 1 35.428 35.481 3 0.0014662 7786 20230619_1886_Aki_TMTPro18x_K_F6 86.243 71.823 36393 28752 33870 43432 47703 60230 48383 48102 58372 38286 49853 59820 44768 43261 55232 46381 58019 59221 33625 26443 34898 42829 48550 59304 49029 49724 58477 39912 51419 59166 46395 45312 56084 47307 55493 56108 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91268000 17674 172 16754 33521 26850 26850 111 1 9606 Homo sapiens 0.0035165416895779344 LTPEQLHSMR Unmodified 1210.6128 0.61284149 172 K7EPV0;A0A024R1X4;Q9Y2R0 COA3;hCG_16955 Cytochrome c oxidase assembly factor 3 homolog, mitochondrial yes no 0 0 0 7 0 1 40.193 40.258 3 4.4036E-09 9343 20230619_1887_Aki_TMTPro18x_K_F7 194.12 149.91 62508 55406 60535 62860 72621 87785 82221 68880 96577 62267 74902 86468 65442 63862 74889 78150 82212 85134 57815 50778 61877 63195 74809 86430 82721 71539 96567 64099 77559 85903 67620 67326 76411 78688 78610 80776 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116010000 17675 172 16754 33522 26851 26851 1 9606 Homo sapiens 0.015959580315666244 LTPEYLELK Unmodified 1104.6067 0.6066767 2318 B2RDK6;O75477;B4DPN7 ERLIN1 Erlin-1 yes no 0 0 0 6.5 0.5 1 1 59.691 59.745 3 0.0033216 18030 20230619_1886_Aki_TMTPro18x_K_F6 81.972 33.548 23261 20717 26059 24423 20494 28944 28661 23552 30621 28687 31127 37653 36744 29664 32038 40201 33908 42310 21542 18993 26157 24424 21986 28790 28481 24592 31097 28998 32205 37540 37089 31423 32813 40319 32483 40133 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36533000 17676 2318 16755 33523;33524 26852 26852 1 9606 Homo sapiens 0.058557630716904896 LTPLPEDNSMNVDQDGDPSDR Oxidation (M) 2329.9968 0.99684806 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 1 0 1 49.63 49.63 3 5.6923E-23 14207 20230619_1880_Aki_TMTPro18x_K_F1 183.6 179.64 34463 25584 33065 36204 33283 39338 38192 41195 43829 44928 47619 51960 48471 40305 39884 50656 47866 54974 31838 23516 33732 35723 34714 39566 38412 42048 44490 45404 48736 52024 49032 42514 41211 50946 45770 52143 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108960000 17677 3758 16756 33525 26853;26854 26853 2440 2 9606 Homo sapiens -0.11495049490531528 LTPLPEDNSMNVDQDGDPSDR Unmodified 2314.0019 0.0019334331 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 1.5 0.5 1 1 53.976 53.99 3 3.587E-08 16021 20230619_1880_Aki_TMTPro18x_K_F1 110.61 105.81 16387 13224 15731 15649 13002 18866 17263 17461 15552 18097 16983 20680 19191 16372 16563 18404 19384 20625 15146 12128 16000 15650 13865 18790 17114 17951 16013 18324 17481 20714 19393 17139 17054 18581 18528 19562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76324000 17678 3758 16756 33526;33527 26855 26855 1 9606 Homo sapiens -0.1025074562789996 LTPLSHEVISR Unmodified 1250.6983 0.69828568 3571 P41091;Q2VIR3;Q2VIR3-2;H7BZU1 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 7.5 0.5 1 1 43.639 43.684 3 2.7449E-17 10951 20230619_1888_Aki_TMTPro18x_K_F8 229.68 177.4 307680 268170 304150 291830 291160 334710 302080 340160 350440 340710 312840 285010 329240 261550 289440 361300 325800 346990 284590 245700 308980 293520 303920 335380 305640 346950 352910 342590 323250 291260 333540 275990 297440 360430 311520 329650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 736310000 17679 3571 16757 33528;33529 26856;26857 26857 2 9606 Homo sapiens 0.08296446488884612 LTPNAGSDR Unmodified 929.45666 0.45665842 3613 P49792;Q13073 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 3.5 0.5 1 1 33.909 33.969 2 0.016581 7136 20230619_1883_Aki_TMTPro18x_K_F4 73.233 40.113 13651 7295.3 12699 18406 21426 24706 17066 21196 18589 12488 19593 23024 20364 17000 18837 9814.4 23846 23091 12588 6776.8 13146 17721 21459 24394 17515 21656 18868 13413 20113 22671 20686 17369 19404 10752 22762 21794 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14057000 17680 3613 16758 33530;33531 26858 26858 1 9606 Homo sapiens -0.010891641473790514 LTPQHDQIQTQPLGK Unmodified 1702.9002 0.90023296 1131 A0A0S2Z5K3;Q3LIB4;A0A0S2Z5R3;Q9NPI6-2;Q9NPI6 Nbla00360;DCP1A mRNA-decapping enzyme 1A yes no 0 0 0 8 0 1 44.521 44.539 3 9.098E-05 11303 20230619_1888_Aki_TMTPro18x_K_F8 95.57 82.169 20391 17042 16849 17228 19895 22697 18703 18509 23276 22313 23605 26676 26112 23038 21346 28749 31058 26706 18831 15606 17458 17463 20415 22448 19070 19299 23472 22486 24329 26758 26362 24174 22365 28663 29592 25403 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25400000 17681 1131 16759 33532 26859 26859 1 9606 Homo sapiens 0.07689885383774708 LTPQMFQQLMK Unmodified 1363.6992 0.69921365 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;C9J2Z7;C9K073 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 5 0 1 63.131 63.178 3 2.7661E-06 19369 20230619_1885_Aki_TMTPro18x_K_F5 147.91 125.19 90321 57215 68952 79505 57409 80282 78930 82950 103110 80828 64668 67464 85014 64840 66467 95778 82158 68912 83236 52617 71733 78450 61352 81116 79068 84490 102120 81442 69054 69041 85228 68611 68938 94163 78365 65787 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80702000 17682 1676;2901 16760 33533 26860 26860 1 9606 Homo sapiens 0.03191201541926603 LTPSGYEWGR Unmodified 1164.5564 0.55637247 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q53GM6 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 7 0 1 50.851 50.929 2 0.011629 14088 20230619_1887_Aki_TMTPro18x_K_F7 74.941 49.851 78734 72786 74869 73780 69052 93014 82690 76294 94923 96024 91735 79122 98675 91755 98207 107440 108710 104470 72832 66631 76306 74718 72704 92211 82961 79622 95914 95525 94509 81586 100530 95046 100500 107520 103890 99272 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117500000 17683 1863 16761 33534 26861 26861 1 9606 Homo sapiens -0.01932346533430973 LTPTELK Unmodified 800.46437 0.46436956 3250 O43252;Q05BW9;Q4W5H3 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 6.5 0.5 1 1 48.709 48.791 2 0.0056347 12998 20230619_1887_Aki_TMTPro18x_K_F7 139.31 62.467 527700 419320 435920 419820 667070 734520 538090 524220 685090 708010 721560 703770 811020 653800 632810 894130 854670 708470 487160 384030 453800 428170 671640 714260 554480 554650 691620 705860 742170 713340 816400 688630 660260 883530 814590 675410 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 458500000 17684 3250 16762 33535;33536 26862;26863;26864 26864 3 9606 Homo sapiens 0.0561559512018448 LTPTEVK Unmodified 786.44872 0.4487195 609 Q53GF5;A0A024RA52;P25787;A0A7I2YQP7;C9JCK5 PSMA2 Proteasome subunit alpha type;Proteasome subunit alpha type-2 yes no 0 0 0 5.5 0.5 1 1 44.705 44.788 2 0.081156 11558 20230619_1885_Aki_TMTPro18x_K_F5 75.38 15.229 45618 31149 43257 42858 49268 64284 52224 53398 122830 48111 43347 49333 57891 42162 49259 40046 54057 49720 42120 28633 44243 42586 51015 63083 54574 55139 117730 49133 48859 49738 58207 43668 50448 40854 51645 47137 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197690000 17685 609 16763 33537;33538 26865 26865 1 9606 Homo sapiens 0.04695308603140802 LTPTHGEMR Oxidation (M) 1056.5022 0.50222841 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 1 0 4 0.816 1 1 1 24.812 24.91 3 0.00064319 3840 20230619_1883_Aki_TMTPro18x_K_F4 101.54 71.289 142100 130340 128330 127790 150030 159160 130260 139100 151870 129910 156500 143100 141330 119520 125430 133060 158270 118440 131390 119290 131800 129760 153610 158200 133220 143210 153610 132220 159570 143940 143990 124750 129660 132690 150840 112800 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 152250000 17686 1296 16764 33539;33540;33541 26866;26867;26868;26869 26866 821 4 9606 Homo sapiens -0.023762619566468857 LTPTHGEMR Unmodified 1040.5073 0.50731378 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 5 0.816 1 1 1 31.614 31.672 3 6.7319E-05 6295 20230619_1885_Aki_TMTPro18x_K_F5 142.92 102.92 34626 24116 33307 31106 34367 31028 31492 30962 40376 30563 38326 41485 35772 34331 36489 37394 43941 32984 31978 22151 33932 30847 35500 31399 32206 31640 40510 31260 39331 41375 36661 35773 37503 37290 41895 31416 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32086000 17687 1296 16764 33542;33543;33544 26870 26870 1 9606 Homo sapiens -0.011319580940153173 LTPVLLAK Unmodified 853.56369 0.56368968 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4H4;A0A7I2V4Y9;B3KTX4;A8K8J9;F8W1I6;H0YI98;A0A7I2V390;F8VW18 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 0 0 3.5 0.5 1 1 58.476 58.493 2 1.4034E-05 17660 20230619_1883_Aki_TMTPro18x_K_F4 143.94 93.919 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17688 1406 16765 33545;33546 26871;26872 26872 2 9606 Homo sapiens 0.13105037804950825 LTPVPDSFFAK Unmodified 1220.6441 0.64412484 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 0 1.5 0.5 1 1 62.076 62.081 2;3 2.9429E-06 19532 20230619_1881_Aki_TMTPro18x_K_F2 163.38 121.95 135790 108810 120150 136740 131590 142380 146770 151980 155570 149380 157160 152150 150200 138570 153730 165620 157110 184690 125420 99856 123630 135870 136190 143770 147390 154510 158050 151170 160870 153930 153760 144810 156530 167020 150480 175120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94588000 17689 3337 16766 33547;33548 26873;26874 26874 2 9606 Homo sapiens 0.04262854337321187 LTPVRPAAASPIVSGAR Unmodified 1661.9577 0.95768826 3114 I3VM54;I3VM53;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7;B4DSG1;Q9Y2K7-3 KDM2A Lysine-specific demethylase 2A yes no 0 0 1 7 0 1 43.755 43.836 3 2.4001E-09 10861 20230619_1887_Aki_TMTPro18x_K_F7 136.33 83.16 54657 40603 47984 53349 55892 60205 52147 51440 69352 59175 60782 54003 69851 52692 53287 65032 55500 61190 50460 37291 49442 52902 57366 60160 53325 53367 69330 59274 63094 55050 70167 55083 54667 64905 53120 58138 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38396000 17690 3114 16767 33549 26875 26875 1 9606 Homo sapiens 0.1531877238001016 LTPWEQFLEK Unmodified 1289.6656 0.66558856 4517 Q9H501;A0A087WX71;A0JLU5 ESF1 ESF1 homolog yes no 0 0 0 8 0 1 63.923 63.946 3 0.00047776 19518 20230619_1888_Aki_TMTPro18x_K_F8 103.31 72.422 71850 58051 63017 76103 63406 78318 58045 72224 91893 91442 80222 99720 111590 98883 72889 155050 121350 150410 66365 53297 64828 75373 65849 78864 59930 74694 91320 91664 84307 100900 111150 104970 77943 154360 115840 142800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63491000 17691 4517 16768 33550 26876 26876 1 9606 Homo sapiens 0.032342393660201196 LTPYEVDELR Unmodified 1233.6241 0.62411768 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 2.5 0.5 1 1 53.489 53.53 2 1.8539E-09 15696 20230619_1882_Aki_TMTPro18x_K_F3 203.19 149.43 215310 171850 199980 221670 163940 193240 200860 205570 229170 272620 277550 290150 312760 278610 253290 402110 377770 424480 198950 157750 204010 219390 174290 197830 201390 211010 234000 272390 284060 293590 315490 294300 266320 402820 360560 402770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 200630000 17692 1328 16769 33551;33552 26877;26878 26877 2 9606 Homo sapiens 0.016650586066816686 LTPYEVDELRR Unmodified 1389.7252 0.72522871 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 1 4.5 1.12 1 1 1 1 46.961 47.031 3 5.2747E-13 12577 20230619_1883_Aki_TMTPro18x_K_F4 214.67 167.83 519290 476890 557500 556760 581190 593010 601950 576950 580890 707000 751120 693870 759020 676540 718230 747020 699430 748270 480830 437120 563440 556360 601680 596820 605360 594070 600350 706960 762690 704610 772500 702090 730210 749640 669730 710510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2031299999.9999998 17693 1328 16770 33553;33554;33555;33556 26879;26880 26879 2 9606 Homo sapiens 0.04595510309400197 LTQAQIFDYGEIPNFPR Unmodified 2008.0054 0.005426314 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;G3V2H3 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 0 0 4.5 3.5 1 1 63.192 63.204 3 4.0702E-38 19780 20230619_1880_Aki_TMTPro18x_K_F1 243.9 217.92 91066 78140 82845 101070 72575 79008 89189 91015 81198 96182 114660 105340 116760 88790 87534 116150 111470 123930 84169 71714 84792 99884 76616 81850 88783 92337 84534 97140 116060 106050 117630 93641 91010 116620 106510 117580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1083100000 17694 3373 16771 33557;33558 26881;26882 26881 2 9606 Homo sapiens 0.04174381789562176 LTQDEIISK Unmodified 1045.5655 0.56554017 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5;G3V2P7 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 0 4 0 1 50.547 50.579 2 3.3518E-08 14249 20230619_1883_Aki_TMTPro18x_K_F4 180.27 90.571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17695 3808 16772 33559 26883 26883 1 9606 Homo sapiens 0.04458002032242803 LTQDQDVDVK Unmodified 1159.5721 0.57208211 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6;B4E1Q0;E9PH38 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 2.5 0.5 1 1 45.582 45.66 2 6.4521E-10 12153 20230619_1882_Aki_TMTPro18x_K_F3 213.25 146.82 177120 102280 193950 205510 241660 260350 199760 225070 237770 205740 331630 357960 275960 268920 288450 159320 352520 338490 163610 94582 196380 199560 246070 258110 205210 231850 243510 213610 333590 353150 284230 274550 295880 172360 336570 319650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 212970000 17696 1860 16773 33560;33561 26884;26885 26885 2 9606 Homo sapiens -0.001321048070622055 LTQEETNFK Unmodified 1108.5401 0.5400537 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;B3KVJ5 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 5 0 1 47.661 47.737 2 0.050687 12781 20230619_1885_Aki_TMTPro18x_K_F5 61.56 30.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17697 4593 16774 33562 26886 26886 1 9606 Homo sapiens -0.009874724901919762 LTQEPESIRK Unmodified 1199.651 0.65100113 469 A0A024R7S3;P09497-2;P09497;H0Y9Q6 CLTB Clathrin light chain B yes no 0 0 1 6 0 1 40.526 40.618 3 0.0038347 9802 20230619_1886_Aki_TMTPro18x_K_F6 74.76 50.295 157410 112500 150190 174280 150670 149120 184340 159700 201770 170640 197480 184190 206690 147430 166240 209360 233240 176750 145380 103530 153320 170520 157230 152930 184390 162860 204250 172310 203090 185260 208620 156630 173660 207450 222120 168430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236030000 17698 469 16775 33563 26887 26887 1 9606 Homo sapiens 0.05916167217878865 LTQIQESQVTSHNK Unmodified 1611.8216 0.82164829 3122 Q92541;I7GPQ7 RTF1 RNA polymerase-associated protein RTF1 homolog yes no 0 0 0 7 0 1 41.739 41.81 3 2.8093E-09 10014 20230619_1887_Aki_TMTPro18x_K_F7 165.64 145.54 19958 18745 19422 22548 26441 26186 25366 24828 27757 24856 30722 26508 21121 17943 29989 25556 25665 25903 18467 17185 19897 22504 26856 26182 25710 25460 28239 25167 30947 26563 22276 19193 30077 25592 24600 24599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43752000 17699 3122 16776 33564 26888 26888 1 9606 Homo sapiens 0.040210330786976556 LTQTSGETTHTHTEPTGDGK Unmodified 2096.9611 0.9610549 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 3 0 1 33.289 33.36 4 8.009000000000001E-30 6905 20230619_1882_Aki_TMTPro18x_K_F3 209.9 196.26 14597 10065 12936 15615 13868 17551 17043 17257 14520 16014 15348 13500 17325 11678 12818 11583 17229 14622 13472 9265.1 13314 15329 14428 17579 16924 17614 14979 16167 15780 13755 17386 12125 13347 11817 16424 13866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30420000 17700 3588 16777 33565 26889 26889 1 9606 Homo sapiens -0.04354718885269904 LTQVLNTHYVAPR Unmodified 1510.8256 0.82561145 1348;1872 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A994J4Z2;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;Q59FZ6;A0A2R8YF80;A0A2R8YGP5;B4E0F1;B4DSI8;B3KNW7;A0A2R8Y523;A0A2R8YFV8;A0A2R8Y4R6;A0A2R8YCY3;B4DSC8;A0A994J4Z7;P51531-2;P51531;B4DK35;A0A994J501;A0A0U1RQZ9;A0A994HRU5 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 0 0 4 0 1 48.893 48.931 3 6.7210999999999995E-28 13458 20230619_1883_Aki_TMTPro18x_K_F4 243.88 211.26 145090 110920 132310 158230 129060 149520 133520 130590 170290 169650 166590 168110 190810 161030 170040 202570 185790 186990 134010 101950 135560 155700 134580 151380 135540 135830 171320 169370 172160 170530 193000 168530 174320 201940 177620 177760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 347060000 17701 1348;1872 16778 33566 26890 26890 1 9606 Homo sapiens 0.09063167363092361 LTQYMDGSGMPK Unmodified 1326.5948 0.59480816 1836 E9PBG7;Q13557-6;A0A994J5B0;D6R938;A0A8V8TNA7;A0A8V8TN65;A0A8V8TND4;Q13557-10;Q13557-8;E9PF82;Q13557-11;Q13557;B7Z2B0;A0A8V8TPK3;Q13557-3;A0A8V8TN88;A0A994J516;A0A8V8TN60;A0A8V8TPY4;A0A8V8TPJ8;A0A8V8TNA1;A0A994J7X8;Q13557-12;Q13557-5;Q13557-9;Q13557-4;H0Y9J2 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 8 0 1 55.016 55.083 2 0.013432 15748 20230619_1888_Aki_TMTPro18x_K_F8 74.841 53.971 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17702 1836 16779 33567 26891 26891 1 9606 Homo sapiens -0.05542545005437205 LTRDETNYGIPQR Unmodified 1561.7849 0.78486885 2907 P63244;E9KL35;D6RAC2;D6REE5;D6RHH4;D6R9L0;D6R9Z1;D6RFX4;B4DVD2;D6RFZ9;D6RBD0;E9PD14;D6RAU2;B4E0C3;B4DWC6;D6RGK8;D6R909 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 1 6.5 1.12 1 1 1 1 41.175 41.237 3 3.7525E-16 9733 20230619_1887_Aki_TMTPro18x_K_F7 179.41 145.54 320020 301710 288990 266760 325270 267450 312030 309460 267340 341430 342790 272500 363860 264700 299050 406010 351670 280050 295960 275890 296420 272710 333820 271890 314170 314030 278330 341030 348580 279970 367300 280840 308710 398380 335470 267590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1683299999.9999998 17703 2907 16780 33568;33569;33570;33571 26892;26893 26893 2 9606 Homo sapiens 0.026447812527976566 LTSAIAK Unmodified 702.42759 0.42759012 2126 A8K8U1;Q86VP6;Q86VP6-2;H0YH27 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 1.5 0.5 1 1 46.566 46.605 2 0.018398 12860 20230619_1881_Aki_TMTPro18x_K_F2 107.32 47.166 229100 147270 297200 267230 398240 435170 292360 353970 365910 139100 204310 178620 169390 143930 295720 105240 179200 140890 212080 135890 297530 262020 402730 425140 303330 361210 361440 153710 215780 178540 179940 147580 290970 109040 172320 133580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108520000 17704 2126 16781 33572;33573 26894 26894 1 9606 Homo sapiens 0.06447343294280472 LTSDDVK Unmodified 776.3916 0.39159855 3712 P62277;J3KMX5;E9PS50 RPS13 40S ribosomal protein S13 yes no 0 0 0 3.5 0.5 1 1 42.424 42.478 2 0.0077813 10696 20230619_1882_Aki_TMTPro18x_K_F3 122.5 29.578 125140 59886 183840 187810 291370 274660 189890 284380 168230 111920 249450 290180 149200 188360 243430 86981 279590 237530 115860 55941 183420 180050 290810 271140 197050 284970 175480 127630 248170 282860 160360 192090 246970 98012 266870 224160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103880000 17705 3712 16782 33574;33575 26895 26895 1 9606 Homo sapiens -0.005541586732306314 LTSEPQPQR Unmodified 1054.5407 0.5407224 492 A0A024R845;P61106;A0A994J451 RAB14 Ras-related protein Rab-14 yes no 0 0 0 3.5 0.5 1 1 34.895 34.951 2 0.0008383 7508 20230619_1883_Aki_TMTPro18x_K_F4 121.58 101.44 95896 50311 102910 122850 134270 146700 132940 143590 155070 113780 172170 220910 143690 155270 166580 96779 193860 180890 88527 46710 104560 118250 136930 146300 134820 146130 157160 119860 174970 216890 148880 159120 170080 103170 185130 170970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68229000 17706 492 16783 33576;33577 26896;26897 26897 2 9606 Homo sapiens 0.015633669495173308 LTSFIGAIAIGDLVK Unmodified 1516.8865 0.88648038 3756 V9HW96;P78371;F5GWF6;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 4 0 1 66.439 66.452 3 1.0375E-07 20981 20230619_1883_Aki_TMTPro18x_K_F4 129.77 98.132 29406 17440 22480 24416 22438 22209 26250 24123 25410 17878 24037 21202 21534 19716 25982 22551 21490 25646 27092 16045 23419 24054 23402 22670 26219 24362 25840 18514 24612 21350 22272 20533 26077 22800 20633 24310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20995000 17707 3756 16784 33578 26898;26899 26899 2 9606 Homo sapiens 0.14871259622645994 LTSFITVFK Unmodified 1054.6063 0.60628277 964 Q13617-2;Q13617;A0A0A0MTN0;A0A8I5QJI3;A0A8I5KYP8;A0A140VKB1;A0A8I5KUA9;A0A8I5KQQ5;Q5T2B5;A0A8I5KU22;A0A0D9SET6;A0A8I5KVR3;B7Z1Y1 CUL2 Cullin-2 yes no 0 0 0 6 0 1 64.148 64.194 2 9.2609E-05 20003 20230619_1886_Aki_TMTPro18x_K_F6 176.6 92.106 286990 237950 263110 291050 254780 294490 321550 315380 334150 371010 342980 333180 377000 316870 333620 385790 364720 405080 265210 218290 269350 289650 267200 297990 320740 322220 340310 370740 352920 339430 381610 331160 342030 387500 348940 384390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 191150000 17708 964 16785 33579 26900;26901 26901 2 9606 Homo sapiens 0.08116388142502728 LTSLGVIGALVK Unmodified 1169.7384 0.73835958 2328 D5MQE1;B2RE59;Q92600;Q92600-3 RQCD1 Cell differentiation protein RCD1 homolog yes no 0 0 0 5 0 1 64.028 64.073 3 0.010861 19765 20230619_1885_Aki_TMTPro18x_K_F5 65.232 49.341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17709 2328 16786 33580 26902 26902 1 9606 Homo sapiens 0.1602799315946868 LTSLNEEYTK Unmodified 1196.5925 0.5924832 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;B4DN49;B4DL39;B4DSB9 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 5.5 0.5 1 1 50.663 50.739 3 4.5112E-07 14047 20230619_1885_Aki_TMTPro18x_K_F5 141.29 108.69 75566 69447 83537 71908 62955 79762 78045 75634 84176 84793 101260 95151 114780 85185 83504 105530 108850 97714 69989 63586 83826 72589 67482 79976 78064 77811 86076 85521 103600 95851 115150 89312 86976 105220 103830 92933 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177340000 17710 3585 16787 33581;33582 26903 26903 1 9606 Homo sapiens 0.0020506585276507394 LTSLNVK Unmodified 773.4647 0.46470391 1159;1980 P26599;P26599-2;A0A0U1RRM4;P26599-1;A0A7I2V621;A0A7I2V4H6;A0A6Q8PEX4;K7EK45;Q59H49;A0A087WU68;O95758-6;O95758-2;O95758;O95758-5;A0A024R163;O95758-4;O95758-1;O95758-7;A6NLN1 PTBP1;PTBP3;ROD1 Polypyrimidine tract-binding protein 1;Polypyrimidine tract-binding protein 3 no no 0 0 0 2.5 0.5 2 2 49.941 50.008 2;3 0.0019262 14457 20230619_1881_Aki_TMTPro18x_K_F2 125.62 64.976 1479100 1137500 1237900 1313700 1767400 1742800 1586400 1642800 2051200 1274600 1370500 1110200 1326000 1104300 1461100 1291400 1522700 1029400 1365300 1043200 1285700 1318100 1788800 1728100 1623600 1674600 2034000 1304600 1434800 1135800 1361400 1149000 1485600 1280900 1452900 982310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2588000000 17711 1159;1980 16788 33583;33584;33585;33586 26904;26905 26904 2 9606 Homo sapiens 0.06891014840050502 LTSLVPFVDAFQLER Unmodified 1733.9352 0.93522148 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 2.5 0.5 1 1 66.326 66.348 3 1.2011E-10 21330 20230619_1881_Aki_TMTPro18x_K_F2 155.09 134.24 32237 29245 32586 31311 28472 31306 32567 32303 34389 40049 36199 38742 43342 34587 33617 44217 39507 45524 29832 26786 33002 31474 30005 31696 32673 33140 35046 40007 37378 39241 43533 36341 34741 44318 37785 43203 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79172000 17712 3152 16789 33587;33588 26906;26907 26906 2 9606 Homo sapiens 0.09761128191712487 LTSPAASEKPDLAGYEAQGAR Unmodified 2131.0546 0.054561351 933 A0A0A0MRC4;Q86YR5;A0A0A0MSK4;Q86YR5-4 GPSM1 G-protein-signaling modulator 1 yes no 0 0 1 6 0 1 48.909 48.986 3 3.5581E-16 13470 20230619_1886_Aki_TMTPro18x_K_F6 151.63 128.98 21401 15341 21564 30001 13291 17369 18558 19547 21880 26558 26768 27384 30898 25578 24566 30114 29974 30235 19775 14165 21818 28892 14626 18547 18531 20031 22317 26480 27412 27700 31099 26688 25420 30180 28628 28715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31579000 17713 933 16790 33589 26908 26908 1 9606 Homo sapiens 0.03427625287895353 LTSPAASEKPDLAGYEAQGARPK Unmodified 2356.2023 0.20228822 933 A0A0A0MRC4;Q86YR5;A0A0A0MSK4;Q86YR5-4 GPSM1 G-protein-signaling modulator 1 yes no 0 0 2 8 0 1 47.607 47.666 4 9.1016E-44 12521 20230619_1888_Aki_TMTPro18x_K_F8 228.62 212.32 101840 95734 101820 98114 70597 68215 82156 92338 81299 124690 124000 119820 130020 114480 118490 137190 130630 133190 94252 87641 102900 98608 76017 71903 82288 93533 84755 124020 125450 121700 131970 119450 121470 137220 124880 126540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 296260000 17714 933 16791 33590 26909 26909 1 9606 Homo sapiens 0.07843516821867524 LTSPGALLFQ Unmodified 1045.5808 0.5807963 3282 O60566-3;O60566;O60566-2 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes no 0 0 0 1.5 0.5 1 1 64.87 64.874 2 0.00080209 20752 20230619_1881_Aki_TMTPro18x_K_F2 117.02 92.021 15237 12540 14597 14123 11110 15360 12749 12599 16092 23759 24510 28469 21200 21817 18142 25699 24435 30567 14085 11494 14827 14154 11892 15374 12878 13364 16566 23543 24626 28437 21624 22916 18894 26011 23361 28959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67000000 17715 3282 16792 33591;33592 26910 26910 1 9606 Homo sapiens 0.059829136200733046 LTSSLTTK Unmodified 849.48075 0.48074791 3492 P22695;H3BRG4;H3BSJ9;H3BP04;H3BUE4;H3BUI9;A0A087WVZ4 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 2 0 1 46.656 46.735 3 0.0010259 12929 20230619_1881_Aki_TMTPro18x_K_F2 109.86 83.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17716 3492 16793 33593 26911 26911 1 9606 Homo sapiens 0.04998676286265891 LTSSSIDPGLSIK Unmodified 1316.7187 0.71874635 4046 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes yes 0 0 0 8 0 1 57.017 57.068 3 3.1879E-06 16619 20230619_1888_Aki_TMTPro18x_K_F8 133.32 131.02 57380 49901 58561 61612 53253 61595 58515 56926 71609 66570 65611 66609 76105 60821 74262 82128 70142 77411 53088 45773 59328 61260 55913 62181 59114 58755 71980 66783 68079 67449 77223 64071 75366 81900 67202 73549 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284130000 17717 4046 16794 33594 26912 26912 1 9606 Homo sapiens 0.0730557235804099 LTSTDTIPK Unmodified 974.52843 0.52842638 3431 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;P11171-5;Q4VB87;A0A994J847;Q29RX4;A0A2R8YCW8;A0A3B3ITP0;P11171-7;A0A2R8Y5Z6;A0A2R8Y7Y3;A0A2R8Y5G2;P11171-6;A0A2R8Y570;A0A2R8Y420;A0A3B3IU06;A0A2R8YFR9;A0A2R8Y6G5;A0A3B3IUD6;A0A2R8Y7N0;A0A2R8Y6D0;A0A1B0GWG0;A0A2R8Y4N6 EPB41 Protein 4.1 yes no 0 0 0 6 0 1 47.357 47.437 2 0.0002366 12763 20230619_1886_Aki_TMTPro18x_K_F6 162.49 103.29 68767 63365 67492 68286 66998 73984 62278 61330 78358 89722 94438 87302 94774 82618 81197 92297 105650 91046 63627 58038 68651 68654 69536 74129 63608 64298 79620 89088 96082 88585 96100 85885 84209 92502 100750 86542 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56378000 17718 3431 16795 33595 26913 26913 1 9606 Homo sapiens 0.04014330486484141 LTTAASLLDVFVLTR Unmodified 1618.9294 0.92940782 151 Q9UH99-2;Q9UH99;B4E2A6;A0A024R1P7;A0A8I5QKM0;B4DIU6;Q9UH99-3;B0QY60;A8K129;B0QY64;A0A024R1S6;B0QY63 SUN2;UNC84B SUN domain-containing protein 2 yes no 0 0 0 5 0 1 66.955 66.997 3 1.33E-07 20982 20230619_1885_Aki_TMTPro18x_K_F5 103.39 87.801 2219.2 1601.3 3205.6 4152.4 2263.2 3136.6 2585.1 2466.9 3828.2 3640.9 3198.4 3927.9 3539.3 3343.5 3220.7 3198.4 3485.6 6116.1 2058 1486.1 3166.1 3963.2 2438.8 3227.8 2627.6 2601.9 3805.6 3627.1 3330.7 3949 3588.9 3464.4 3295.9 3378.6 3350.7 5768.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6597900 17719 151 16796 33596 26914 26914 1 9606 Homo sapiens 0.14470029680069274 LTTAFEEVWGVI Unmodified 1363.7024 0.702368 4312 Q92979;A0A087WVM7 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes no 0 0 0 6.5 0.5 1 1 69.257 69.289 2 0.079281 21802 20230619_1887_Aki_TMTPro18x_K_F7 57.96 41.736 4761.7 2242 3764.8 2909.2 5052.7 3322.6 4407.1 3365.3 4535.5 2706.9 1037.6 3794.5 5059.8 3930.7 3684.3 4458.1 4354.6 3265.7 4383.7 2050.8 3918.4 2891 5113.2 3335.4 4480.3 3421 4478.1 2808.6 1250.4 3800.4 4971.4 4076.6 3810.8 4403.6 4152.4 3100.3 2 1 2 2 2 2 2 2 2 2 1 2 2 2 2 2 2 1 2680200 17720 4312 16797 33597;33598 26915 26915 1 9606 Homo sapiens 0.03506491191933492 LTTDFGNAEK Unmodified 1094.5244 0.52440364 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 4.5 0.5 2 2 49.742 49.798 2;3 3.5282E-14 13868 20230619_1883_Aki_TMTPro18x_K_F4 270.06 167.66 823100 639040 662770 641940 682790 747930 579970 554890 743350 617390 632090 511550 669440 525600 500860 758270 636380 474120 759630 585330 686540 649780 705620 744300 596020 582040 743530 617990 654320 525450 673910 553830 521140 741650 606450 453930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1147900000 17721 1817 16798 33599;33600;33601;33602 26916;26917;26918 26916 3 9606 Homo sapiens -0.019077590072356543 LTTDFNVIVEALSK Unmodified 1548.8399 0.83992412 2662 B5BUB5;P05455;E7ERC4;E9PGX9;E9PFL9 SSB Lupus La protein yes no 0 0 0 2 0 1 66.359 66.366 3 0.021128 21394 20230619_1881_Aki_TMTPro18x_K_F2 56.599 40.462 3241.8 4385 2886.3 4330.3 4195.7 3936.5 4911.2 4389.7 4506.6 4053.2 5993.9 4828.1 4511.4 4907.4 4151.6 5751.2 4216.2 4743.7 3007.1 4009.1 2990.5 4373.4 4266.4 4025.5 4895.5 4447.4 4666.7 4138.7 6006.5 4878 4640.3 5096.6 4241.2 5705.5 4037 4514.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11071000 17722 2662 16799 33603 26919 26919 1 9606 Homo sapiens 0.08745775000716094 LTTEEVIK Unmodified 931.52261 0.52261272 2230 Q6IAU5;B2R665;O15355;B4DDC8;B3KXL8 PPM1G Protein phosphatase 1G yes no 0 0 0 4.5 0.5 1 1 49.37 49.426 3 0.0029741 13719 20230619_1883_Aki_TMTPro18x_K_F4 98.523 54.128 153080 121280 132950 133720 148740 140420 138680 160320 181130 147080 182740 167570 174240 125730 147800 198860 177140 204410 141360 111160 136920 134200 152910 142040 141800 161990 182040 149970 186890 167970 176710 135050 152680 198780 169390 193990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 224990000 17723 2230 16800 33604;33605 26920 26920 1 9606 Homo sapiens 0.05411231974812836 LTTINCEEGDK Unmodified 1278.5762 0.57618121 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8 IFI16 Gamma-interferon-inducible protein 16 yes no 0 0 0 2.67 0.471 1 2 46.122 46.201 2;3 1.0129999999999999E-22 12401 20230619_1882_Aki_TMTPro18x_K_F3 244.01 191.52 121620 93876 106080 122950 187280 214050 189070 190290 241300 194840 192440 196000 249160 193210 161600 239860 240090 225160 112300 86201 110440 122910 188310 208910 191970 196020 240890 196860 202140 198920 248310 201930 170620 239230 228850 214070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 332100000 17724 2829 16801 33606;33607;33608 26921;26922 26922 2 9606 Homo sapiens -0.051963833756417444 LTTLELLEVR Unmodified 1185.6969 0.69688869 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 7 0 1 62.615 62.651 2 2.5562E-05 19015 20230619_1887_Aki_TMTPro18x_K_F7 157.59 121.71 1633000 1285600 1383400 1599800 1497600 1729100 1659100 1830200 2039200 1947300 1834000 1896600 2107500 1789400 1982300 2233900 2026900 2333300 1507700 1179800 1429200 1591500 1552600 1740700 1675400 1865200 2048300 1960300 1903900 1924400 2136400 1873300 2021900 2242500 1941000 2214000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1161200000 17725 2337;3778;3779 16802 33609 26923 26923 1 9606 Homo sapiens 0.11146812400124873 LTTPPVNTR Unmodified 997.55564 0.55564418 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 4.5 3.5 1 1 40.318 40.313 2 0.0006316 10207 20230619_1880_Aki_TMTPro18x_K_F1 128.93 107.63 170430 118830 166440 164900 201750 229140 200690 187970 245700 191680 228740 219710 221030 190440 218550 216830 247660 218480 157420 109230 169950 163530 206860 225810 203750 194980 246880 194530 235100 220860 225760 198770 223860 217590 236480 207600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 165540000 17726 2863 16803 33610;33611 26924;26925 26924 2 9606 Homo sapiens 0.05676858817514585 LTTPTYGDLNHLVSATMSGVTTCLR Oxidation (M) 2723.3259 0.32585053 3748;1486;3381;1424;3870;3201 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A1L195;A1L196;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;Q1KSF8;Q8IZ29;P68371;Q8IWP6;Q13885;B2R6L0;A5D907;A5D906;M0R2D3;P04350;B4DE77 TUBB2B;DKFZp566F223;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB4A Tubulin beta-2B chain;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-4A chain no no 0 1 0 5 0 1 61.565 61.614 3 8.0164E-13 18597 20230619_1885_Aki_TMTPro18x_K_F5 124.66 103.35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17727 1424;1486;3748;3870;3201;3381 16804 33612 26926 26926 896 1 9606 Homo sapiens 0.033120638156560744 LTTSPAQNAQQLHER Unmodified 1692.8543 0.8543454 1941 Q92556;A4D1X5;C9IZR8;C9JIW2 ELMO1 Engulfment and cell motility protein 1 yes no 0 0 0 6.5 0.5 1 1 36.961 37.027 3 6.0123E-34 8332 20230619_1886_Aki_TMTPro18x_K_F6 263.6 221.51 28666 21935 31914 22659 34648 38703 34434 38365 44871 43788 38589 36698 45556 34832 32584 50224 42793 39309 26520 20097 32136 23069 35778 37915 35064 39314 44899 43752 40163 37537 45644 36814 34022 49559 40821 37464 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 224380000 17728 1941 16805 33613;33614 26927;26928 26927 2 9606 Homo sapiens 0.03563240201538065 LTVADALEPVQFEDGQK Unmodified 1858.9313 0.93125832 2223 P10644;B2R5T5;Q68DQ4;K7EM13;P10644-2;K7EPB2 PRKAR1A;DKFZp779L0468 cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 62.447 62.465 3 1.6196E-14 19385 20230619_1883_Aki_TMTPro18x_K_F4 168.5 139.87 89910 73844 82961 90910 74593 103060 107630 106840 115290 120720 129210 114520 126650 110990 120810 131650 121450 153040 83086 67747 84821 90575 79196 103320 106840 109230 117560 121060 131710 116500 129070 115740 123060 133120 116410 145020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94483000 17729 2223 16806 33615;33616 26929 26929 1 9606 Homo sapiens 0.03614993907331154 LTVAENEAETK Unmodified 1203.5983 0.59829686 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 2.67 0.471 1 2 46.426 46.505 2;3 3.3863E-12 12544 20230619_1882_Aki_TMTPro18x_K_F3 248.14 181.64 461110 358350 449140 497930 601690 604650 609690 563050 783330 542800 694040 732150 652210 587270 623230 586660 782070 697360 426150 329260 459840 492600 612910 602380 619270 577730 783610 555920 714680 729610 666020 610390 642750 595960 746160 661490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 541580000 17730 3402 16807 33617;33618;33619 26930;26931 26931 2 9606 Homo sapiens 0.004641643644163196 LTVDEAVR Unmodified 901.4869 0.48689592 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0;Q96IE3 PLEC;PLEC1 Plectin yes no 0 0 0 3 0 1 43.286 43.356 2 6.3495E-06 11066 20230619_1882_Aki_TMTPro18x_K_F3 151.56 65.089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17731 3921 16808 33620 26932 26932 1 9606 Homo sapiens 0.03221194517800541 LTVDELK Unmodified 816.45928 0.45928418 4188 Q86V35 CABP7 Calcium-binding protein 7 yes yes 0 0 0 5 0.816 1 1 1 51.899 51.958 2 0.0053195 14607 20230619_1885_Aki_TMTPro18x_K_F5 141.78 0 846430 717440 756720 670270 898920 968660 924690 937610 1155100 966230 1179600 1416900 1134300 1018600 1134400 1301500 1384900 1474200 782160 656550 777800 685510 923520 956650 937940 960530 1163800 988780 1208800 1404100 1159800 1078400 1168300 1312400 1323200 1398100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 908040000 17732 4188 16809 33621;33622;33623 26933;26934 26934 2 9606 Homo sapiens 0.043712912575642804 LTVEDLEK Unmodified 945.50188 0.50187728 2536 Q15691;B4DM33 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes no 0 0 0 3 0.816 2 2 2 54.054 54.087 2;3 2.3145E-05 16219 20230619_1881_Aki_TMTPro18x_K_F2 134.91 56.414 360700 274450 326300 345870 289330 353080 341020 327780 384750 431990 425460 439360 465530 402770 398260 495690 468760 465480 333120 251930 333920 343510 305230 355850 342310 339490 391390 431190 436420 444450 470740 421520 410590 494670 447800 442450 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1299300000 17733 2536 16810 33624;33625;33626;33627;33628;33629 26935;26936;26937;26938 26935 4 9606 Homo sapiens 0.026946415951329072 LTVEDPVTVEYITR Unmodified 1633.8563 0.85630246 1051 Q05DH1;A0A0K0K1K4;O14818;H0UI83;O14818-4;H0Y586;O14818-2;Q4G1B8;B0YJ74;A0A087WYS6;Q8TAA3-2;Q8TAA3-5;Q8TAA3 PSMA7;hCG_41772;PSMA8 Proteasome subunit alpha type;Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like yes no 0 0 0 3.5 0.5 1 1 60.073 60.089 2 1.6152E-09 18355 20230619_1883_Aki_TMTPro18x_K_F4 194.39 178.06 68579 52940 68955 70134 61270 80259 71068 67307 176180 86544 79078 78840 97524 74741 77682 91605 82787 84136 63393 48618 69921 69533 64838 80055 74226 70179 169380 86457 86442 80245 97998 78162 79699 91331 79170 79987 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47966000 17734 1051 16811 33630;33631 26939;26940 26940 2 9606 Homo sapiens 0.06472856166806196 LTVENSPK Unmodified 886.476 0.47599688 689 F8VVL1;A0A024RBR3;O43583 DENR Density-regulated protein yes no 0 0 0 6 0 1 42.744 42.838 2 0.0015948 10719 20230619_1886_Aki_TMTPro18x_K_F6 153.71 65.682 106580 57322 120930 126800 167040 175330 131770 153520 148000 105180 165620 182430 147850 149480 161550 72063 179260 183800 98454 53113 122360 122830 168810 172970 135500 157010 150360 111300 168470 180410 152260 151200 164500 80229 171380 173370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72878000 17735 689 16812 33632 26941 26941 1 9606 Homo sapiens 0.02821792143527091 LTVIDTPGFGDHINNENCWQPIMK Unmodified 2798.3156 0.31562019 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;A0A0S2Z5W9;Q9UHD8-4;Q9UHD8-8;Q9UHD8-9;A0A6Q8PHC2;K7EL40;K7EK18;K7ER52;K7EIE4;K7EQD7;K7EJZ2 SEPT9 Septin-9 yes no 0 0 0 7.5 0.5 1 1 62.014 62.046 4 5.3433E-14 18646 20230619_1888_Aki_TMTPro18x_K_F8 143.15 136.04 48723 43011 51923 45323 43743 55455 55292 55249 54883 73026 51599 56491 65717 61684 64419 73757 70364 76078 45100 39393 52329 45757 46426 55305 55087 56901 55938 72323 53772 58245 66614 64098 65909 74026 67306 72214 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 790500000 17736 541 16813 33633;33634 26942 26942 1 9606 Homo sapiens -0.011604991188505664 LTVLSEER Unmodified 945.51311 0.51311067 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 3 0.816 1 1 1 46.955 47.021 2 0.00045063 12795 20230619_1882_Aki_TMTPro18x_K_F3 163.72 87.587 797040 652550 679040 729990 746440 856790 825910 820560 927390 793820 824510 807160 911020 721910 829450 929470 883980 842430 736100 598140 701010 732720 772750 856000 831190 840010 934680 804350 854520 816340 922890 758570 848420 925580 844970 801220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 811360000 17737 1022;3868 16814 33635;33636;33637 26943;26944 26943 2 9606 Homo sapiens 0.03817463689279066 LTVNDFVR Unmodified 962.51853 0.5185304 4002;2357 Q53GR7;Q9UJS0;Q9UJS0-2;B7Z2E2;B3KMV8;O75746-2;O75746 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 0 0 0 8 0 1 53.634 53.706 2 0.017682 15170 20230619_1888_Aki_TMTPro18x_K_F8 103.42 96.509 502730 454920 524250 548440 532060 675100 629370 621510 688360 557510 598490 602560 700910 591120 539300 720190 688610 642930 465340 417130 531210 547860 555250 671560 630710 636910 693990 568570 622680 609700 704570 616830 560460 716840 657100 611640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 421310000 17738 4002;2357 16815 33638 26945 26945 1 9606 Homo sapiens 0.03577187271753246 LTVQEEPATTNREPSHIR Unmodified 2077.0552 0.055230053 2840 D6R9W2;Q8NEC7-3;Q8NEC7 GSTCD Glutathione S-transferase C-terminal domain-containing protein yes no 0 0 1 4 0 1 35.792 35.839 4 8.5935E-07 7883 20230619_1883_Aki_TMTPro18x_K_F4 117.67 93.391 14159 9128 11617 12529 16617 20130 16018 16189 24727 12712 19975 25005 23338 22337 16720 23058 27087 32051 13056 8392.7 12097 12466 16886 19676 16444 16718 24459 13439 20888 24739 23428 23160 17726 23641 25851 30328 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19521000 17739 2840 16816 33639 26946 26946 1 9606 Homo sapiens 0.05978464727559185 LTVSNVLK Unmodified 872.53312 0.53311783 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 2.5 0.5 2 2 53.605 53.646 2;3 0.0012731 15766 20230619_1882_Aki_TMTPro18x_K_F3 116.25 97.635 602040 455830 478940 479390 418540 574370 378910 373850 539980 277490 239450 188990 220940 174330 275730 252540 237210 170150 555490 417720 495810 483520 440070 568920 389430 393370 528310 283670 258760 195650 228720 184460 277140 248020 226870 162730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2111799999.9999998 17740 1817 16817 33640;33641;33642;33643 26947;26948;26949 26949 3 9606 Homo sapiens 0.09175259419907889 LTVSSLQESGLK Unmodified 1260.6925 0.6925316 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4DTD5 FLNA;FLJ00119 Filamin-A yes no 0 0 0 1 0 1 55.229 55.229 3 1.2031E-05 16499 20230619_1880_Aki_TMTPro18x_K_F1 133.05 93.87 73227 65027 67827 69087 70534 83358 72777 74246 85660 87280 76589 83978 94440 76910 86972 90936 87533 92332 67706 59560 69401 69652 73184 83015 73662 76812 86249 87419 79851 85128 95442 80337 88622 91229 83778 87665 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126340000 17741 3484 16818 33644 26950 26950 1 9606 Homo sapiens 0.07261303186578516 LTVSSVNNPR Unmodified 1085.5829 0.58292157 4182 Q86TB9-2;Q86TB9-4;Q86TB9;B7Z1D3 PATL1 Protein PAT1 homolog 1 yes no 0 0 0 1 0 1 40.023 40.023 2 1.8437E-05 10108 20230619_1880_Aki_TMTPro18x_K_F1 161.28 124.84 27579 18898 27438 27501 27039 35971 29004 31435 40322 30208 36171 37451 36842 32512 27879 36449 41760 34305 25474 17383 27885 27167 28239 35598 29488 32386 40231 30840 37328 37531 37178 33891 29316 36424 39770 32633 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22991000 17742 4182 16819 33645 26951 26951 1 9606 Homo sapiens 0.043553423578941874 LTVVDTPGYGDAINCR Unmodified 1749.8356 0.83558379 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;C9J2Q4;C9J938;C9JB25;C9IY94;H7C310;C9IZU3;C9JQJ4;B5MD47 SEPT2 Septin-2 yes no 0 0 0 5.5 0.5 1 1 53.78 53.854 3 3.9346999999999998E-19 15406 20230619_1885_Aki_TMTPro18x_K_F5 194.48 185.68 134330 98082 131830 135290 120330 120820 115290 142380 125150 182810 177560 197210 202900 177910 146420 219120 579680 194470 124100 90135 133930 133400 125680 123790 117040 144980 129330 182870 180880 198860 204230 186260 173980 217950 547780 186380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1999799999.9999998 17743 3910 16820 33646;33647 26952;26953 26952 2 9606 Homo sapiens -0.009340574844600269 LTVWAPLLPLR Unmodified 1277.786 0.78597847 3959 Q24JP5-4;Q24JP5;Q24JP5-2;H0YFQ2 TMEM132A Transmembrane protein 132A yes no 0 0 0 8 0 1 64.963 64.982 2 5.8988E-05 19946 20230619_1888_Aki_TMTPro18x_K_F8 141.48 101.94 34070 28171 28683 29422 38373 53316 36877 39302 54286 9390.8 8352.7 9539.8 10786 10076 13514 10484 11838 9235.4 31465 25805 29751 29924 39187 51746 37768 40298 52345 11200 10853 9720.8 11091 10391 13583 10472 11325 8794.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15977000 17744 3959 16821 33648 26954 26954 1 9606 Homo sapiens 0.15819692150307674 LTVYLGK Unmodified 792.47454 0.47454032 2004 P49407;P49407-2;A8K103;E9PM35;P32121-4;A8K4I6;P32121-3;P32121;P32121-2;P32121-5;I3L0V6;K7ENA6 ARRB1;ARRB2 Beta-arrestin-1;Beta-arrestin-2 yes no 0 0 0 3.5 0.5 1 1 56.2 56.222 2 0.017824 16895 20230619_1882_Aki_TMTPro18x_K_F3 108.09 11.122 287190 312180 359870 271600 366030 300850 411960 314300 329280 255550 257080 217780 233240 181600 430520 270680 268690 253660 266660 285310 359010 278540 379600 302880 409990 318840 337070 260340 266390 221850 247950 193330 424490 270120 258540 241160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 321260000 17745 2004 16822 33649;33650 26955;26956 26955 2 9606 Homo sapiens 0.07000202845415515 LTWHAYPEDAENK Unmodified 1572.7209 0.72087161 3587 V9HWG0;P45973;Q6I9T7 HEL25;CBX5 Chromobox protein homolog 5 yes no 0 0 0 5 0.816 1 1 1 48.41 48.475 3 4.5918E-06 13254 20230619_1886_Aki_TMTPro18x_K_F6 127.71 104.58 268250 201980 273780 283270 205570 271350 261550 262070 247070 346280 368500 383490 423890 313570 307100 451590 402670 402150 247960 185620 276720 279190 220680 274930 260290 270710 257760 346340 374780 385370 425010 333160 320410 448370 384350 382490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 540950000 17746 3587 16823 33651;33652;33653 26957;26958;26959 26959 3 9606 Homo sapiens -0.04257998904154192 LTWHSCPEDEAQ Unmodified 1471.6038 0.60379294 1933 A4D177;Q13185 CBX3 Chromobox protein homolog 3 yes no 0 0 0 2 0.816 1 1 1 45.94 45.992 2 5.9148E-08 12528 20230619_1881_Aki_TMTPro18x_K_F2 169.41 151.67 284240 246110 293390 290970 288510 334840 310100 316870 342930 398820 373570 338990 414520 310210 319650 369110 419140 388520 262990 225660 297200 290810 300760 334860 312570 327040 349110 396760 383300 345880 417020 324380 332450 370910 399860 368930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1242400000 17747 1933 16824 33654;33655;33656 26960;26961;26962 26961 3 9606 Homo sapiens -0.1131448011537941 LTYTAEVSVPK Unmodified 1206.6496 0.64960415 1222 A0A140VK27;P09960;B4DVZ8;P09960-2;P09960-4;Q59ES1;P09960-3 LTA4H Leukotriene A-4 hydrolase;Leukotriene A(4) hydrolase yes no 0 0 0 7.5 0.5 1 1 53.358 53.429 3 8.0655E-05 15004 20230619_1888_Aki_TMTPro18x_K_F8 121.83 95.289 115200 91964 108680 113760 124240 128760 134120 115160 135910 141950 142090 131730 139340 119290 138370 139010 143150 150100 106460 84385 111210 113290 128000 128780 134680 119350 138660 141720 145330 133780 142250 124540 140990 140000 136960 142420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 346310000 17748 1222 16825 33657;33658 26963;26964 26964 2 9606 Homo sapiens 0.0545453312911377 LTYTECLR Unmodified 1054.5117 0.51173046 236 A0A024R3C7;Q13315;B4DSP3;Q68DE6 ATM;DKFZp781A0353 Serine-protein kinase ATM yes no 0 0 0 7 0 1 46.408 46.496 2 0.036599 11962 20230619_1887_Aki_TMTPro18x_K_F7 74.184 47.961 111870 94493 103770 113230 119910 120960 121560 118090 121280 137060 143180 136010 143290 114560 131490 143480 144670 141180 103400 86660 106370 112920 123220 121720 122490 121360 124530 137420 145840 137420 145620 120440 134710 143560 138270 134130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81898000 17749 236 16826 33659 26965 26965 1 9606 Homo sapiens -0.013344936711291666 LVAAMEEVFMDK Unmodified 1381.6622 0.66215945 2539 B4DM84;Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 yes no 0 0 0 6 0 1 66.282 66.325 3 0.0025134 20884 20230619_1886_Aki_TMTPro18x_K_F6 72.652 56.761 6071.1 4922.3 5236.3 6700 7349.1 6676.1 9338.3 6653.5 7839.3 7014.3 6878.6 5715.1 7160.1 5531.6 6042 8676.9 9081.3 8192.6 5607.1 4521 5430.6 6616.7 7503.5 6755.2 9242.3 6816.6 8031.3 7032.3 7108.2 5864.1 7246.4 5882.2 6345.5 8632.4 8653.4 7789.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3043300 17750 2539 16827 33660 26966 26966 1 9606 Homo sapiens -0.013405147944922646 LVACWTK Unmodified 876.45276 0.45275902 762 O94979-9;D6REX3;O94979-6;O94979-3;O94979-4;O94979-10;O94979-2;O94979;O94979-8;A0A1S5UZ19;A1LU61;A0A024RDH6;D6RHZ5;O94979-7;H7BXG7;H0YAB3;H0Y9K1 SEC31A;SEC31L1 Protein transport protein Sec31A yes no 0 0 0 3.5 0.5 1 1 54.345 54.376 2 0.01296 16025 20230619_1882_Aki_TMTPro18x_K_F3 124.12 83.178 124860 114690 116210 116480 133390 163700 150470 147220 177180 71382 71212 42451 64515 46746 92467 68144 83707 46645 115480 105000 119070 118170 137820 161560 151440 149480 174410 75543 77635 44748 67386 49244 92901 67016 79918 44668 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126650000 17751 762 16828 33661;33662 26967 26967 1 9606 Homo sapiens 0.009590748251980585 LVAEWEGQDSDSDQLFYTK Unmodified 2230.0066 0.0066081055 2219 B4DGN8;B2R5M9;Q02809;Q02809-2;Q5JXB7 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes no 0 0 0 4.5 0.5 1 1 63.017 63.044 3 0.053657 19627 20230619_1883_Aki_TMTPro18x_K_F4 41.348 28.419 7167.1 4427.6 6328.1 9106.7 6797.8 7485.8 9677.2 8493.8 9008.3 8613 7414.9 11892 11585 11118 9436.6 11612 10769 17043 6610.7 4094.4 6524.4 8779.6 7098 7707.9 9563 8620.1 9157.1 8797.9 7898 11884 11601 11522 9720.9 11956 10334 16107 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53050000 17752 2219 16829 33663;33664 26968 26968 1 9606 Homo sapiens -0.05919493422834421 LVAGEHGLIIR Unmodified 1176.6979 0.69789175 3269 O43847;O43847-2;Q96L67;B4DRI0;Q6UUU9;G3V1R5;H0Y5G9;B4DYV0 NRD1 Nardilysin yes no 0 0 0 4.5 3.5 1 1 46.152 46.171 3 1.3692E-12 11929 20230619_1888_Aki_TMTPro18x_K_F8 206.73 151.64 96025 76965 84936 98316 87314 106050 101740 100980 120180 110660 100950 91517 118850 86769 96842 126470 120420 104470 88695 70644 87337 97616 91017 106500 102300 103770 120640 110760 105180 93694 119630 91815 100320 125130 114880 99515 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 343100000 17753 3269 16830 33665;33666 26969;26970 26970 2 9606 Homo sapiens 0.11661071559706215 LVAGEMGQNEPDQGGQR Oxidation (M) 1800.8061 0.80607458 1085 A0A0S2Z410;Q99714;A0A804HHW5;Q99714-2;Q5H928;A0A0S2Z434 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 1 0 1.5 0.5 1 1 37.882 37.913 3 1.4993E-13 9151 20230619_1880_Aki_TMTPro18x_K_F1 152.07 133.7 58325 43011 55265 64616 66855 73163 71806 69006 87088 68959 75161 75718 76236 64793 64997 77740 84033 89952 53875 39564 56632 63552 68677 73212 72558 70795 87322 69939 77715 76205 77264 67900 67413 78554 80259 85286 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 264380000 17754 1085 16831 33667;33668 26971;26972 26971 648 2 9606 Homo sapiens -0.062296215006654165 LVAGSTDQLLSAFVPPEEPPLQPAR Unmodified 2631.3908 0.39081727 2320 B2RDN4;Q14137;A8K3R2;B4DEN9;Q14137-2;Q4G0D9;Q6DKJ9 BOP1 Ribosome biogenesis protein BOP1 yes no 0 0 0 7.67 0.471 1 2 64.681 64.703 3;4 1.5078E-26 19837 20230619_1888_Aki_TMTPro18x_K_F8 175.86 165.25 32316 23072 32506 36709 34898 37159 37153 33814 42524 45220 41382 42381 50159 38164 37224 42755 38558 42455 29859 21241 33065 35932 36111 37454 37491 35095 43011 45006 42890 42988 50262 39775 38184 42863 36906 40313 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 195860000 17755 2320 16832 33669;33670;33671 26973;26974 26974 2 9606 Homo sapiens 0.14037749675480882 LVAIVDPHIK Unmodified 1103.6703 0.67028001 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 3.67 3.09 1 1 1 54.274 54.306 3 0.0001073 15371 20230619_1888_Aki_TMTPro18x_K_F8 120.09 73.932 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17756 3900;2497 16833 33672;33673;33674 26975;26976;26977 26977 3 9606 Homo sapiens 0.12259168299442535 LVAIVDVIDQNR Unmodified 1353.7616 0.76161421 1898 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 RPL14 60S ribosomal protein L14 yes no 0 0 0 7 0 1 63.705 63.737 2 1.0148E-10 19545 20230619_1887_Aki_TMTPro18x_K_F7 229.17 193.92 1336300 1069300 1215000 1269000 1054700 1291200 1324800 1294700 1434900 1461700 1264700 1325000 1497700 1329700 1415500 1562200 668790 1820800 1234600 980770 1242400 1265700 1116700 1304000 1323700 1327000 1449700 1464200 1316500 1351300 1516600 1384300 1401000 1580000 655090 1722400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1858999999.9999998 17757 1898 16834 33675 26978;26979 26979 2 9606 Homo sapiens 0.0988838720613785 LVALETGIQK Unmodified 1070.6336 0.63356015 240 A0A024R3F4;A0A024R3H6;Q86UU1-2;Q86UU1;Q96D60;B0YJ65;Q6ZUD6;Q8NC75;A0A087WZL0;Q5W9G0;Q86UU1-3 PHLDB1;KIAA0638 Pleckstrin homology-like domain family B member 1 yes no 0 0 0 8 0 1 57.165 57.217 3 0.0008979 16656 20230619_1888_Aki_TMTPro18x_K_F8 103.55 54.752 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17758 240 16835 33676 26980 26980 1 9606 Homo sapiens 0.10106871682887686 LVALLNTLDR Unmodified 1126.671 0.67100829 1720 Q15257;Q15257-2;Q15257-3;A0A804CD06;A6PVN5;B4DZF8;F6WIT2;Q5T949;A6PVN6;A6PVN8;A6PVN7;C9IZ76 PPP2R4 Serine/threonine-protein phosphatase 2A activator yes no 0 0 0 3 0 1 64.146 64.178 2 9.8226E-08 20208 20230619_1882_Aki_TMTPro18x_K_F3 192.91 111.36 77017 62988 70796 83642 78710 101080 90327 87601 102480 85577 79980 66598 73695 62230 103900 88547 90006 67404 71168 57834 72658 82961 81576 100530 90746 90364 102780 86066 82825 68396 76851 65715 104260 87433 86095 64328 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 263970000 17759 1720 16836 33677 26981 26981 1 9606 Homo sapiens 0.11273962948507688 LVALSEPALALLGLGAPPAR Unmodified 1928.1459 0.14588296 4452 Q9BVL4 SELO Selenoprotein O yes yes 0 0 0 6 0 1 66.825 66.868 3 1.2926E-16 21106 20230619_1886_Aki_TMTPro18x_K_F6 165.02 143.93 3395.6 3322.2 1847 3050.2 2874.8 3185.4 2630.6 2403 4445 3221.4 3240.1 2404.8 3862.3 3307.5 3609.9 3411.9 3715.8 3560 3131.8 3038.4 2027.5 3104.4 2906.3 3195.9 2719.4 2532.1 4375 3192.9 3402.3 2512.3 3910.8 3389 3679.7 3436.2 3553.1 3380.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4792400 17760 4452 16837 33678 26982 26982 1 9606 Homo sapiens 0.2189358551377154 LVAQLYK Unmodified 833.50109 0.50108942 651 O75390;A0A024RB75;B4DJV2;B3KTN4;A0A0C4DGI3;H0YIC4;Q0QEL2 CS Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 3.5 0.5 1 1 54.045 54.079 2 0.010649 15949 20230619_1882_Aki_TMTPro18x_K_F3 117.7 61.189 378110 398280 334690 303090 655770 952980 488130 559570 989390 70866 55783 79547 82351 72884 170210 83765 89320 79735 349920 363700 348570 322500 654290 904770 516420 584970 939490 100380 102530 80512 87842 75950 166580 84064 86177 75811 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 451870000 17761 651 16838 33679;33680 26983;26984 26983 2 9606 Homo sapiens 0.07767891736750698 LVARPEPATGYTLEFR Unmodified 1818.9628 0.96283322 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 1 3.67 3.09 1 1 1 52.086 52.124 3 3.2026E-26 15407 20230619_1881_Aki_TMTPro18x_K_F2 238.81 206.98 653770 574380 688610 642470 631060 674620 750480 750810 769090 854920 847020 802030 902320 728740 790170 871620 855620 925580 605060 526350 695480 644150 662810 681740 750630 764400 786070 856520 867490 814250 913520 762080 809560 876390 818510 878300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6782099999.999999 17762 1426 16839 33681;33682;33683 26985;26986 26985 2 9606 Homo sapiens 0.08611031451960116 LVASAYSIAQK Unmodified 1149.6394 0.63937381 3362 V9HWF9;O95861-4;O95861;A6NF51;O95861-2;F8W1J0;F8VVW8;F8VZG4 HEL20;BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes no 0 0 0 3.5 0.5 1 1 55.477 55.503 3 2.3332E-05 16572 20230619_1882_Aki_TMTPro18x_K_F3 139.43 122.2 69137 50928 56318 63340 69675 67198 63196 79365 79710 66156 51324 78739 72155 57139 63154 79077 80785 77028 63791 46749 58500 63012 71126 67955 64629 79836 79181 67931 55099 78556 72566 60817 65434 78948 77098 73197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 385290000 17763 3362 16840 33684;33685 26987 26987 1 9606 Homo sapiens 0.07053970194556314 LVAVGGQPR Unmodified 895.52395 0.52395013 4137 Q6XQN6;Q6XQN6-2;G5E977;Q6XQN6-3;C9J8U2;A0A087WUT5 NAPRT Nicotinate phosphoribosyltransferase yes no 0 0 0 2 0 1 41.17 41.247 2 0.016172 10399 20230619_1881_Aki_TMTPro18x_K_F2 73.975 52.015 68904 60691 72480 74894 77708 81148 75255 81045 110790 89829 101960 108480 94260 77494 101410 84771 97551 82305 63771 55667 73412 74560 80256 81597 77137 83030 110430 90905 104740 108170 96761 81330 102680 85008 93267 78256 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45858000 17764 4137 16841 33686 26988 26988 1 9606 Homo sapiens 0.07200910854237463 LVCLQSVCNSGLK Unmodified 1476.7429 0.74286938 1374 H3BMM5;B2RDH6;A0A2R8YF87;Q96AX1;A0A2R8Y5U3;Q9H6C4 VPS33A Vacuolar protein sorting-associated protein 33A yes no 0 0 0 4 0 1 57.026 57.032 3 0.032891 17111 20230619_1883_Aki_TMTPro18x_K_F4 48.585 28.478 129950 99601 116800 127850 100890 130570 122880 120380 152890 131640 126000 114580 128090 108550 138400 125310 118910 116250 120010 91442 119590 126810 106870 131540 123560 124010 152930 131990 130590 116910 131130 113070 139410 125210 113950 110520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33912000 17765 1374 16842 33687 26989 26989 1 9606 Homo sapiens 0.023567662484083485 LVCSVTGMALPR Unmodified 1302.6788 0.67881256 1701 Q06330;D6R927;A0A7P0Z4N7;A0A7P0TBJ4;Q06330-7;Q06330-6;Q06330-4;Q06330-5;A0A7P0T9Y9;A0A7P0T947;B7Z8D8;Q06330-3;A0A024R9Q8;D6RF98;Q06330-2;Q14663 RBPJ;RBPSUH;KBF2 Recombining binding protein suppressor of hairless yes no 0 0 0 5 0 1 57.746 57.804 2 0.068007 16995 20230619_1885_Aki_TMTPro18x_K_F5 57.174 37.387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17766 1701 16843 33688 26990 26990 1 9606 Homo sapiens 0.039580308821086874 LVDAGFVWTEPHSK Unmodified 1584.7936 0.79364262 2409 B3KT11;C9JA08;Q96D46;C9J0B9;C9IZW9;C9K0C2 NMD3 60S ribosomal export protein NMD3 yes no 0 0 0 7.5 0.5 1 1 57.632 57.685 3 7.2061E-09 16834 20230619_1888_Aki_TMTPro18x_K_F8 158.81 92.282 144730 116250 135880 153540 127950 142150 147260 169530 170440 152290 130390 126240 153090 124800 145370 164260 144790 144890 133740 106740 138750 151850 134100 145210 148130 170780 170760 154040 136660 129360 155140 130900 148030 163300 138540 137820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 318390000 17767 2409 16844 33689;33690 26991;26992 26991 2 9606 Homo sapiens 0.0246375488927697 LVDEEPQLTK Unmodified 1170.6132 0.61321864 902 A0A090N7X1;A0A090N7Y2;Q9UG63;Q9UG63-2 ABCF2 ATP-binding cassette sub-family F member 2 yes no 0 0 0 3 0 1 51.459 51.525 2 1.6733E-09 14848 20230619_1882_Aki_TMTPro18x_K_F3 227.88 160.85 71308 57242 62844 64971 73074 80782 71692 71455 96972 94441 90866 97708 104040 71312 65449 112250 98665 91638 65864 52480 64708 65198 75124 80292 73142 74243 97158 94317 94074 98145 103850 76636 69322 110840 94032 87282 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77381000 17768 902 16845 33691 26993 26993 1 9606 Homo sapiens 0.03473656232426947 LVDEYSLNAGK Unmodified 1207.6085 0.60846762 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 5.2 0.748 1 2 2 53.779 53.841 2;3 1.1228E-08 15392 20230619_1885_Aki_TMTPro18x_K_F5 182.16 147.97 172040 156640 188300 196140 239690 271140 284050 271640 311620 246150 228930 255060 303260 233280 244940 272960 243440 243390 159310 143680 190840 195830 246060 268430 284490 276720 312530 250520 242210 257760 304220 243510 250160 271960 232940 231480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1836099999.9999998 17769 43 16846 33692;33693;33694;33695;33696 26994;26995;26996 26995 3 9606 Homo sapiens 0.012967720896540413 LVDIIAAVPPQYR Unmodified 1453.8293 0.82929985 4538 Q9H9T3-2;Q9H9T3;E5RHY2;E5RIC0;E5RIZ7;E5RHR2 ELP3 Elongator complex protein 3 yes no 0 0 0 3 0 1 63.475 63.506 3 2.8758E-05 19912 20230619_1882_Aki_TMTPro18x_K_F3 116.54 83.418 12156 10792 13950 16861 14246 18398 15045 18463 14736 16730 15557 15752 17980 13355 18395 17383 16242 17716 11260 9925.1 14047 16538 14808 18472 15128 18801 15080 16960 16037 15957 18276 14080 18574 17426 15571 16818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33704000 17770 4538 16847 33697 26997 26997 1 9606 Homo sapiens 0.12053837136932088 LVDPERDMSLR Oxidation (M) 1345.666 0.66599927 3890 Q14444-2;Q14444;G3V153;B3KXU8 CAPRIN1 Caprin-1 yes no 0 1 1 3.5 0.5 1 1 40.91 40.961 3 0.0049073 9973 20230619_1882_Aki_TMTPro18x_K_F3 72.731 43.432 73223 69646 71442 80336 104610 100400 91636 90999 103960 97021 113980 92695 91164 76751 96119 106840 102940 102850 67763 63823 73259 80514 105580 99845 93521 93757 105580 97611 115330 93868 93996 81293 98094 106620 98422 97731 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230860000 17771 3890 16848 33698;33699 26998 26998 2568 1 9606 Homo sapiens 0.006992910235794625 LVDPERDMSLR Unmodified 1329.6711 0.67108465 3890 Q14444-2;Q14444;G3V153;B3KXU8 CAPRIN1 Caprin-1 yes no 0 0 1 4.5 0.5 1 1 47.258 47.318 3 7.1695E-05 12752 20230619_1883_Aki_TMTPro18x_K_F4 130.36 104.35 295280 257890 286520 276160 256100 297940 291050 308680 345470 335870 282650 257250 340740 267680 270230 350530 329430 293760 273090 236240 291270 277880 269570 299940 293220 315210 346560 335630 295270 265230 342510 280260 279720 347520 314380 279750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 293580000 17772 3890 16848 33700;33701 26999;27000 26999 2 9606 Homo sapiens 0.019435948861882935 LVDPLYSIK Unmodified 1046.6012 0.60119739 2030 A8K3S1;P46926;P46926-2;B3KMV2 GNPDA1 Glucosamine-6-phosphate isomerase;Glucosamine-6-phosphate isomerase 1 yes no 0 0 0 1 0 1 61.634 61.634 2 4.5038E-05 19134 20230619_1880_Aki_TMTPro18x_K_F1 164.57 108.56 303370 280410 285230 315690 273470 288080 314800 304310 276840 378040 373010 392260 383320 336170 390500 454080 399710 444260 280610 256930 291240 315650 285870 293930 314000 311840 288480 378270 378890 395710 391270 354800 397850 453660 382660 421910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137780000 17773 2030 16849 33702 27001 27001 1 9606 Homo sapiens 0.07976084279880524 LVDQSGPPHEPK Unmodified 1302.6568 0.65681479 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;A0A3B3ISX1;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 4 0 1 39.563 39.605 4 4.1133E-05 9386 20230619_1883_Aki_TMTPro18x_K_F4 104.87 89.327 96719 46354 87790 94601 123400 109390 115920 134520 123100 104160 110050 118690 110740 85740 93095 102250 115370 111770 89134 42921 90474 91713 124950 110030 117560 134800 124460 107280 113610 118690 112130 90446 96251 103000 110140 106070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43359000 17774 1718;4020 16850 33703 27002 27002 1 9606 Homo sapiens 0.01759265729560866 LVDTFLEDVK Unmodified 1177.6231 0.62305505 2785 CON__P34955 yes yes 0 0 0 4.5 0.5 1 1 63.892 63.918 3 1.2477E-05 19707 20230619_1885_Aki_TMTPro18x_K_F5 147.95 103.64 + 53252 139050 161190 55411 399430 515710 261890 256290 381250 119700 173550 250350 101450 116510 187370 120790 141070 260280 50741 126380 157880 69028 392880 480480 275350 275640 372540 132930 185310 243430 110190 124790 186150 129290 136250 245300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 593550000 17775 2785 16851 33704;33705 27003;27004 27004 2 0.04134844237796642 LVDVICEK Unmodified 974.51067 0.51066783 455;447 S4R3Q3;A0A024R7I7;P20336;A0A024R7G2;B2R8W8;O95716 RAB3A;RAB3D Ras-related protein Rab-3A;Ras-related protein Rab-3D no no 0 0 0 5.5 0.5 1 1 56.21 56.278 2 0.0025474 16576 20230619_1886_Aki_TMTPro18x_K_F6 124.98 62.783 150890 125180 146490 158730 118430 149150 146180 139050 143310 160140 173410 192340 171240 154850 169530 181160 197590 199510 139500 114870 148840 157410 126100 151280 145780 143420 147410 161640 176570 192460 174840 162320 174030 182630 188790 189290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 263310000 17776 455;447 16852 33706;33707 27005;27006 27006 2 9606 Homo sapiens 0.022392919599724337 LVEAEVHR Unmodified 951.51378 0.51377937 125 H0YHF8;F8VZX1;H0YIC9;F8VYY9;A0A024R125;P54619-2;P54619;P54619-3 PRKAG1 5'-AMP-activated protein kinase subunit gamma-1 yes no 0 0 0 3 0 1 36.317 36.371 3 0.0001724 8115 20230619_1882_Aki_TMTPro18x_K_F3 160.11 125.3 39634 29509 39287 41525 51057 52585 49471 46065 67881 47841 68260 68741 64886 55139 51250 55207 64333 70044 36625 27122 40127 41077 52060 52182 50522 47574 68027 48938 69844 68378 65686 57336 53100 56300 61467 66350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32793000 17777 125 16853 33708 27007 27007 1 9606 Homo sapiens 0.036083031289990686 LVEALCAAGHR Unmodified 1195.6132 0.61317584 3498 Q6FGU2;P23919;Q53F55;P23919-2;H7C312;G5E9E9;H7C3A4 DTYMK Thymidylate kinase yes no 0 0 0 1 0 1 47.678 47.678 3 8.688300000000001E-31 13398 20230619_1880_Aki_TMTPro18x_K_F1 225.01 191.92 30065 26899 24192 33949 20757 34440 30810 34244 47010 35004 43514 36257 43950 33113 26590 66885 59522 61161 27772 24677 25089 33697 22239 34750 30980 35013 46768 35401 44743 36760 44034 36059 29387 66204 56643 58145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220640000 17778 3498 16854 33709 27008 27008 1 9606 Homo sapiens 0.023193777514279645 LVEALCAEHQINLIK Unmodified 1749.9447 0.94474031 3501 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 0 8 0 1 60.811 60.844 4 7.9307E-14 18109 20230619_1888_Aki_TMTPro18x_K_F8 176.43 143.02 180390 155720 179630 199630 160130 201440 196330 207800 219130 251880 217950 219670 261590 207920 208550 280180 241590 259050 166850 142890 182400 198010 169040 203630 196640 212980 222160 251150 225560 224110 263000 218770 215230 278990 230960 246210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142810000 17779 3501 16855 33710 27009 27009 1 9606 Homo sapiens 0.09976573205631212 LVEALPYNTSLVEMK Unmodified 1705.8961 0.89605879 3518 P28289;P28289-2 TMOD1 Tropomodulin-1 yes no 0 0 0 8 0 1 62.816 62.841 3 0.00050398 19005 20230619_1888_Aki_TMTPro18x_K_F8 85.734 78.676 68042 52725 64125 71483 50036 65488 69513 71171 76268 80481 60357 61597 76369 54112 54631 89850 67568 73884 62865 48432 65314 70562 53700 66770 69181 72562 76755 80242 63367 63156 76349 58001 56849 88705 64567 70321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63520000 17780 3518 16856 33711 27010 27010 1 9606 Homo sapiens 0.0713465984586037 LVEAVDGK Unmodified 829.45453 0.45453316 4243 Q8NBJ5;M0QX72;Q6IPW8 COLGALT1;GLT25D1 Procollagen galactosyltransferase 1 yes no 0 0 0 4 0 1 49.136 49.174 2 0.0021851 13601 20230619_1883_Aki_TMTPro18x_K_F4 141.39 0 114780 65197 105800 126860 149740 152110 132240 134040 172880 149340 175790 207580 170690 160470 170570 118700 196710 192490 105860 60262 109000 123220 151580 151410 135590 138610 173870 151920 180230 206220 174480 164880 174590 124280 187930 182060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97212000 17781 4243 16857 33712 27011 27011 1 9606 Homo sapiens 0.032984071148121075 LVEDEERR Unmodified 1044.52 0.51998696 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 1 0 1 32.187 32.187 3 0.00044837 6831 20230619_1880_Aki_TMTPro18x_K_F1 143.73 114.26 133920 101360 149660 147770 170670 191320 166830 175500 188990 159620 210400 198020 207500 176060 201870 113140 250550 208560 123890 93192 151030 145950 175510 189720 169190 179920 191980 163400 214670 198440 211620 179150 207530 120360 238960 197240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 356180000 17782 3881 16858 33713 27012 27012 1 9606 Homo sapiens -0.0004922343014186481 LVEDHLAVQSLIR Unmodified 1491.8409 0.84092717 2470 Q02218;Q02218-2;E9PDF2;B4DF00;E9PCR7;Q02218-3;A0A140VJQ5;A2VCT3;A2VCT2;C9J4G7;Q9ULD0 OGDH;OGDHL 2-oxoglutarate dehydrogenase, mitochondrial;2-oxoglutarate dehydrogenase-like, mitochondrial yes no 0 0 0 7 0 1 54.341 54.404 3 2.8464E-06 15505 20230619_1887_Aki_TMTPro18x_K_F7 134.68 98.26 48739 51560 60418 67898 59143 70271 71389 71790 71909 75101 69511 81122 76741 65666 68623 82045 76237 87611 45240 47296 60446 67246 61849 70892 71296 73331 73175 75880 71835 81518 77718 69117 70422 82454 72948 83113 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 591970000 17783 2470 16859 33714 27013 27013 1 9606 Homo sapiens 0.1146803416027069 LVEDKPGSR Unmodified 999.53491 0.53490874 2085 A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5 SFRS4;SRSF4 Serine/arginine-rich splicing factor 4 yes no 0 0 1 5.5 0.5 1 1 37.769 37.853 3 0.0033376 8666 20230619_1886_Aki_TMTPro18x_K_F6 87.485 54.848 153830 90310 175890 169260 214330 227890 181470 206990 217130 180870 275000 282380 228760 197270 246190 129390 270180 242520 142160 83411 177350 165100 218630 225380 186140 212140 221220 187280 277470 278970 235750 202790 250680 137870 258080 229250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 304140000 17784 2085 16860 33715;33716 27014 27014 1 9606 Homo sapiens 0.03512268437862076 LVEDMENK Oxidation (M) 992.44846 0.4484615 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;Q7L4N0 CAPZB F-actin-capping protein subunit beta yes no 0 1 0 1.5 0.5 1 1 41.857 41.896 2 0.062698 10664 20230619_1881_Aki_TMTPro18x_K_F2 66.457 35.799 90626 63661 92593 101250 117750 135890 112060 121260 132880 115640 145090 153270 138400 123630 134920 103150 160700 158420 83741 58613 94338 99543 120230 134360 113990 124710 134600 118340 148060 152790 141350 127460 138500 107200 153490 149890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56213000 17785 1434 16861 33717;33718 27015 27015 917 1 9606 Homo sapiens -0.04806479179012513 LVEDMENK Unmodified 976.45355 0.45354688 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;Q7L4N0 CAPZB F-actin-capping protein subunit beta yes no 0 0 0 2.2 0.748 1 2 2 50.346 50.396 2;3 4.9357E-05 14637 20230619_1881_Aki_TMTPro18x_K_F2 150.24 72.96 520740 442670 490980 497810 561910 547790 560530 549590 595570 584260 607940 588530 601070 510080 596790 554510 634340 557030 481400 405720 502240 499080 577460 550510 566400 562260 605380 588710 622840 594550 613460 531120 608730 556900 606040 529330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1340600000 17786 1434 16861 33719;33720;33721;33722;33723 27016;27017 27016 2 9606 Homo sapiens -0.03562175316403682 LVEEHLK Unmodified 866.48617 0.48616764 4528 Q9H7Z6-2;Q9H7Z6 KAT8 Histone acetyltransferase KAT8 yes no 0 0 0 3.5 0.5 1 1 42.222 42.275 3 0.0042495 10519 20230619_1883_Aki_TMTPro18x_K_F4 111.82 39.677 108640 78825 94577 107400 105150 116100 113200 112470 152260 129800 155480 150220 147090 119480 119820 150070 160590 150830 100280 72430 97484 106200 108700 116640 114870 115630 152910 130920 158910 150580 149090 125890 124740 150270 153190 143280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64409000 17787 4528 16862 33724;33725 27018 27018 1 9606 Homo sapiens 0.04758399868774177 LVEGESDNR Unmodified 1017.4727 0.47270242 317 A0A024R534;O94776 MTA2 Metastasis-associated protein MTA2 yes no 0 0 0 1 0 1 35.342 35.342 2 0.0082232 8146 20230619_1880_Aki_TMTPro18x_K_F1 88.37 54.117 13930 8677.7 17531 17286 23621 28410 21259 21263 25392 15129 22433 27752 22791 18732 18391 10762 23166 25298 12889 8020 17604 16874 24004 27694 21696 22052 25476 16021 23201 27258 23038 19214 18998 11784 22134 23866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13859000 17788 317 16863 33726 27019 27019 1 9606 Homo sapiens -0.03533502701134239 LVEGPPPPPEPPK Unmodified 1352.734 0.73400248 2899 E7ESL0;J3KQY1;Q9NWU5;Q9NWU5-2;Q9NWU5-3 MRPL22 39S ribosomal protein L22, mitochondrial yes no 0 0 0 5 0 1 51.073 51.148 3 0.0012276 14245 20230619_1885_Aki_TMTPro18x_K_F5 90.731 73.405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17789 2899 16864 33727 27020 27020 1 9606 Homo sapiens 0.07174483945891552 LVEGTCFR Unmodified 980.47495 0.47495102 1941 Q92556;A4D1X5;B4DJV6;Q92556-3;Q92556-2 ELMO1 Engulfment and cell motility protein 1 yes no 0 0 0 6.5 0.5 1 1 45.708 45.795 2 0.0021524 12009 20230619_1886_Aki_TMTPro18x_K_F6 131.27 49.484 275150 211960 259810 249070 339050 362300 348480 346790 428280 351940 363600 332160 396200 327350 316590 428160 454110 377060 254210 194420 266360 250050 346200 357430 353140 355300 429070 355020 377220 338260 399680 343160 331500 425460 432630 358960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118260000 17790 1941 16865 33728;33729 27021;27022 27021 2 9606 Homo sapiens -0.016067454970198014 LVEHGLNETIHIR Unmodified 1529.8314 0.83142511 1804 B4DRV5;A0A8Q3WLP2;Q53FD7;Q53H29;A0A8Q3WKJ4;Q7Z3B4-3;Q7Z3B4;Q7Z3B4-2 NUP54 Nucleoporin p54 yes no 0 0 0 5.5 0.5 1 1 44.31 44.395 4 7.4374E-11 11455 20230619_1886_Aki_TMTPro18x_K_F6 180.61 143.77 48374 45278 48096 51854 45839 45993 54179 54704 60761 61838 61468 57461 60335 50287 62228 74790 56711 65468 44768 41492 48866 51774 47980 47181 54359 55477 61568 61965 62969 58335 61689 53400 63016 74200 54375 62249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 355490000 17791 1804 16866 33730;33731 27023 27023 1 9606 Homo sapiens 0.08770265874727556 LVEIDNGK Unmodified 886.476 0.47599688 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 4.5 0.5 1 1 48.93 48.987 2 0.0025513 13488 20230619_1883_Aki_TMTPro18x_K_F4 136.75 78.585 322590 215350 289510 369350 509070 580320 505900 527120 708260 476030 549240 607460 578220 478350 491030 463410 588790 592190 297690 198520 300790 362690 511860 569180 516070 540540 702970 488290 572530 606020 585120 497070 506060 473280 562430 561080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 435560000 17792 1428 16867 33732;33733 27024;27025 27024 2 9606 Homo sapiens 0.02821792143527091 LVELTQK Unmodified 829.49092 0.49091866 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJG8;A0A804HI44;A8K6U0;Q9NP80-2;Q9NP80-3;A0A024R746;A0A0C4DG51;Q9NP80 LRPPRC;PNPLA8;IPLA2(GAMMA) Leucine-rich PPR motif-containing protein, mitochondrial;Calcium-independent phospholipase A2-gamma yes no 0 0 0 7.5 0.5 1 1 51.432 51.509 3 0.0017793 14174 20230619_1888_Aki_TMTPro18x_K_F8 134.12 41.658 172350 139840 150580 156890 162170 173780 178610 169410 223180 194710 217430 239310 220910 185870 182360 243510 255560 235470 159190 128190 154980 157320 168050 174400 180480 174090 224510 196830 223600 239100 223590 196490 190480 243140 243670 223810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 351370000 17793 1723 16868 33734;33735 27026 27026 1 9606 Homo sapiens 0.06935284011512977 LVEQLKEER Unmodified 1142.6295 0.62953741 3127 Q86Y74;J3KPP4;O95232;Q6PKC2;A8K3C5;B4DJ96 CROP;LUC7L3 Luc7-like protein 3 yes no 0 0 1 5 0 1 47.164 47.24 3 0.040913 12559 20230619_1885_Aki_TMTPro18x_K_F5 57.888 38.625 146720 126910 163310 140060 177490 153870 188090 161260 180750 120560 150540 68037 79547 53480 176950 71755 75893 63954 135850 116290 164550 140680 183070 154870 188760 163190 183050 122510 152400 71235 87861 56724 172070 71719 73508 60870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42253000 17794 3127 16869 33736 27027 27027 1 9606 Homo sapiens 0.06392782189186619 LVEQYTK Unmodified 879.47018 0.47018322 146 A0A024R1K8;Q15459;Q15459-2;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 6.5 0.5 1 1 46.848 46.934 2 0.01164 12157 20230619_1887_Aki_TMTPro18x_K_F7 116.37 58.908 339990 230660 293660 354880 363510 432740 387780 371500 508830 429680 483260 505050 523850 436340 396340 428620 592270 547470 313690 212310 303660 348900 373260 430030 393160 385380 510250 433680 498760 506760 527430 452160 416200 437440 564480 518890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 319820000 17795 146 16870 33737;33738 27028 27028 1 9606 Homo sapiens 0.02562693631853108 LVESDAEAEAVR Unmodified 1287.6307 0.63065962 4045 Q8IXG0;Q69YP1;Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 crn;DKFZp762M013;CRNKL1 Crooked neck-like protein 1 yes no 0 0 0 1 0 1 44.473 44.473 2 8.878E-10 12068 20230619_1880_Aki_TMTPro18x_K_F1 225.01 203.71 97300 71748 89250 106640 123950 145380 122020 122420 144380 124450 125790 136500 142160 127400 113620 137800 151890 150010 89853 65989 91984 105250 126060 143470 123780 126680 145070 126100 130700 137690 143310 132250 118280 138930 144940 142360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 80001000 17796 4045 16871 33739 27029;27030 27030 2 9606 Homo sapiens -0.001650482325885605 LVESLPQEIK Unmodified 1154.6547 0.65468953 2530 B4DLN1;P52815;Q96Q74 MRPL12;MRPL7/L12 39S ribosomal protein L12, mitochondrial yes no 0 0 0 5 0 1 56.685 56.746 2 4.7687E-07 16555 20230619_1885_Aki_TMTPro18x_K_F5 148.91 108.48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17797 2530 16872 33740 27031 27031 1 9606 Homo sapiens 0.08354836991748016 LVEVDSGR Unmodified 873.4556 0.45559579 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98 LMNB1 Lamin-B1 yes no 0 0 0 2.5 0.5 1 1 41.469 41.539 2 0.0006503 10230 20230619_1882_Aki_TMTPro18x_K_F3 159.2 109.61 212380 139740 173010 182550 238820 244040 167310 167200 216100 226360 251680 249920 249330 219220 216360 177220 275320 244050 195840 128400 179990 181550 241000 240400 174440 177710 218960 226400 256380 251400 253040 224990 223590 182670 262640 231210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1027099999.9999999 17798 3482 16873 33741;33742 27032 27032 1 9606 Homo sapiens 0.013806214837131847 LVEVDSSR Unmodified 903.46616 0.46616048 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 0 0 2.5 0.5 1 1 41.163 41.231 2 0.0015979 10136 20230619_1882_Aki_TMTPro18x_K_F3 140.09 48.463 93987 60481 95415 95062 93317 100920 113820 109220 124580 111790 135130 133950 134950 119670 125260 95379 149150 136300 86802 55699 96784 93221 97616 101750 113910 111090 126650 113530 138130 134430 137310 122660 128680 98646 142390 129070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101810000 17799 1473 16874 33743;33744 27033 27033 1 9606 Homo sapiens 0.010566041381480318 LVFDEYLK Unmodified 1025.5433 0.54334816 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;A0A0S2Z377 ANXA6 Annexin A6;Annexin no no 0 0 0 6.5 0.5 1 1 62.042 62.085 2 0.0019235 18727 20230619_1887_Aki_TMTPro18x_K_F7 143.85 103.42 1321100 1157700 1303100 1382500 1353600 1604400 1340100 1363900 1408000 1672900 1951200 1883800 1821600 1632700 1847600 2053800 2094200 2216100 1222000 1061600 1326500 1380600 1402500 1599900 1355100 1418300 1453000 1680200 1970500 1895100 1865100 1714500 1893100 2065500 2002200 2102700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1409600000 17800 1062;1064 16875 33745;33746 27034;27035 27035 2 9606 Homo sapiens 0.031598223544506254 LVFGFLNGR Unmodified 1021.5709 0.57090032 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;G3V2H3 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 0 0 7 0 1 62.87 62.902 2 0.048674 19159 20230619_1887_Aki_TMTPro18x_K_F7 84.699 69.617 114050 103910 120360 116780 111080 119520 97469 109960 129130 133270 134570 143350 129500 119460 152760 128190 133420 166280 105580 95213 121540 116970 115770 120490 100160 113610 130040 133730 137700 144170 133470 124500 153740 130890 128070 157410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 382570000 17801 3373 16876 33747 27036 27036 1 9606 Homo sapiens 0.0609777040535846 LVFLACCVAPTNPR Unmodified 1616.8167 0.81670303 3892 Q4ZG57;Q14566 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 6.5 0.5 1 1 61.346 61.393 3 1.6711E-16 18718 20230619_1886_Aki_TMTPro18x_K_F6 205.02 189.06 67137 59741 67879 68786 42159 59190 69446 65389 63045 82379 73846 69985 75894 53144 55211 70527 81775 73736 62119 54757 68530 68632 46622 60713 68277 66849 65098 81903 75301 71012 76351 56370 58051 70724 77930 70030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1137800000 17802 3892 16877 33748;33749 27037 27037 1 9606 Homo sapiens 0.03296734410719182 LVFLGEQSVGK Unmodified 1175.655 0.65502388 342 P20340;A0A024R5J5;P20340-2;A0A024R5H8;Q6FGX3;Q53ET8;P20340-3;F5H3K7;Q9NRW1;Q6AZ91;F5GX61;C9J0I2 RAB6A;RAB6B Ras-related protein Rab-6A;Ras-related protein Rab-6B yes no 0 0 0 3.67 3.09 1 1 1 60.486 60.501 3 0.00025925 18660 20230619_1880_Aki_TMTPro18x_K_F1 106.16 71.436 326200 266670 298810 332310 255880 301260 309650 308840 325190 334090 329140 311560 348590 288100 330580 387600 347420 365050 301420 244690 305390 329800 270810 307140 309700 315760 330670 335570 338300 316710 354260 303260 337730 386460 332370 346900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 700620000 17803 342 16878 33750;33751;33752 27038;27039;27040;27041 27038 4 9606 Homo sapiens 0.07422256711606678 LVFLGLDNAGK Unmodified 1145.6445 0.64445919 4052;3991 Q5SQT9;Q9NR31;Q8NG23;Q6FID4;B2R679;Q5SQT8;X1WI22;D6RAA2;D6RDB2;Q53F37;Q9Y6B6;D6RD69 SAR1A;SARA1;SAR1B GTP-binding protein SAR1a;GTP-binding protein SAR1b no no 0 0 0 2 0.707 1 2 1 62.808 62.82 2;3 1.6626E-12 19880 20230619_1881_Aki_TMTPro18x_K_F2 214.54 176.98 732760 630850 650790 676770 558660 711480 727990 706870 766710 922880 896710 934220 941630 811530 935680 1087000 970620 1148500 677160 577930 666830 680500 593000 716780 725620 728280 784780 921130 916330 943780 959380 855840 954420 1090800 929570 1089600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 992520000 17804 4052;3991 16879 33753;33754;33755;33756 27042;27043 27042 2 9606 Homo sapiens 0.07746274057171831 LVFPQDLLEK Unmodified 1200.6754 0.67542497 795 A0A075B6F6;A0A0S2Z6F0;A0A3B3IT72;A0A0S2Z5V7;A0A3B3IUB5;Q8TCT9-5;Q8TCT9;Q8TCT9-4;Q8TCT9-2 HM13 Minor histocompatibility antigen H13 yes no 0 0 0 8 0 1 63.417 63.439 3 0.00018065 19266 20230619_1888_Aki_TMTPro18x_K_F8 119.53 70.028 156040 140540 159370 165840 144410 183930 191790 180640 180060 200620 192310 205590 220590 193920 198420 223810 227890 255520 144400 128840 161490 165680 152560 184500 190280 185320 184720 201790 198100 208060 223250 202040 203920 226120 217950 242250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308190000 17805 795 16880 33757 27044 27044 1 9606 Homo sapiens 0.08311427371427271 LVFSNVNLK Unmodified 1032.5968 0.59678072 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5 DDB1 DNA damage-binding protein 1 yes no 0 0 0 4 0 1 59.054 59.056 2 6.4529E-16 17929 20230619_1883_Aki_TMTPro18x_K_F4 190.93 105.11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17806 1710 16881 33758 27045 27045 1 9606 Homo sapiens 0.08178619856971636 LVGDVDFEGVR Unmodified 1204.6088 0.60880197 1651 A0A7I2V2U6;B2R7W0;P13995;P13995-2;A0A7I2V482;B4DY35;B9A062 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes no 0 0 0 3 0.816 1 1 1 56.378 56.399 2 1.3749E-05 16834 20230619_1883_Aki_TMTPro18x_K_F4 178.32 142.97 132310 113520 136760 138420 114340 137680 141820 133990 150450 184890 201370 219000 203030 182100 181640 217540 216880 239580 122410 104120 138240 137760 121340 139190 141750 138560 154920 185090 204390 219470 206220 190900 187240 219160 207330 227240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 258880000 17807 1651 16882 33759;33760;33761 27046;27047 27047 2 9606 Homo sapiens 0.014681918094993307 LVGEIKEEEK Unmodified 1172.6289 0.62886871 2079 A8K5T7;Q9Y2Z0;B4DYC6;Q9Y2Z0-2;A8K7W3 SUGT1 Suppressor of G2 allele of SKP1 homolog yes no 0 0 1 4 0 1 48.701 48.738 3 0.00095441 13365 20230619_1883_Aki_TMTPro18x_K_F4 84.169 36.275 430510 331240 377580 410210 377120 476700 397310 405650 492900 591670 586360 611020 703700 528120 393690 751380 666560 686900 397530 303990 388190 408590 393080 475260 402570 424240 501070 588480 602020 616750 699470 559540 422830 746730 635260 653030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96816000 17808 2079 16883 33762 27048 27048 1 9606 Homo sapiens 0.049459427494639385 LVGGQAGLGR Unmodified 926.52976 0.52976379 4756 Q9Y6C2;A0A0A0MT20;Q9Y6C2-2 EMILIN1 EMILIN-1 yes no 0 0 0 2 0 1 42.1 42.179 2 2.6066E-05 10804 20230619_1881_Aki_TMTPro18x_K_F2 157.33 107.29 126970 102500 131410 126340 148850 151200 134380 135310 217110 201030 268560 378110 254390 228360 298010 230960 298400 280190 117430 94042 133330 125980 152900 150700 138940 141170 218410 204990 273320 370200 262210 240460 301900 235080 285380 265670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190570000 17809 4756 16884 33763 27049 27049 1 9606 Homo sapiens 0.06356009365902082 LVGGTTPGK Unmodified 828.47052 0.47051757 2059 Q6IAL5;B2R8A1;A8K4W7;P53597;A0A494C0D1;B7Z438 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes no 0 0 0 1.5 0.5 1 1 43.186 43.186 2;3 0.0039171 11360 20230619_1881_Aki_TMTPro18x_K_F2 93.143 43.103 27207 30328 31058 27035 28311 29261 29760 31528 39233 35056 34810 33202 31796 30460 34831 31660 39342 31717 25244 27720 31160 27644 29652 29504 30229 32136 39247 35191 35786 33690 32722 31562 35593 31817 37546 30152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19395000 17810 2059 16885 33764;33765 27050;27051 27051 2 9606 Homo sapiens 0.049421133517171256 LVGIISSR Unmodified 843.5178 0.51780212 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5;B7Z1G4;Q6QE17 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 0 0 4 0.816 1 1 1 51.443 51.499 2 0.0025719 14656 20230619_1883_Aki_TMTPro18x_K_F4 124.59 30.588 396090 312760 324230 345550 287430 337940 334890 314300 374920 410830 424880 440290 452610 382080 415740 453270 462700 474300 365620 286690 334910 346290 303130 341870 336260 325470 381860 410880 434910 443590 459290 399850 426190 455440 442330 450230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 472640000 17811 1454 16886 33766;33767;33768 27052;27053 27052 2 9606 Homo sapiens 0.08978392622714182 LVGMPAK Unmodified 714.40983 0.40983157 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2V2S7;A0A7I2V3F7;B7Z1V7;H0Y8K0;A0A3B3ITI4 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 2 0 1 49.403 49.462 3 0.044251 14162 20230619_1881_Aki_TMTPro18x_K_F2 62.842 43.365 122810 102150 104970 106590 120610 136130 134920 128820 166810 64846 57838 47467 57867 40909 86469 71455 73170 42381 113430 93565 108380 107720 124540 135260 136080 130400 163460 68632 64474 48883 60418 44036 86595 69741 69924 40675 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77902000 17812 1488 16887 33769 27054 27054 1 9606 Homo sapiens 0.04120304767775451 LVGPEGFVVTEAGFGADIGMEK Unmodified 2222.0929 0.092920692 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;A0A8V8TL50;A0A8V8TKS0;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 7 0 1 64.532 64.562 3 0.0096207 19911 20230619_1887_Aki_TMTPro18x_K_F7 53.359 38.105 11131 4295.8 10302 10494 8616.5 9239.4 9323.1 8322 12749 12623 12346 11763 14570 9466 14360 14529 12201 13757 10252 3996.6 10508 10061 9108.8 9408.5 9467.6 8686.9 12783 12503 12781 11906 14767 10122 14488 14474 11705 13069 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24414000 17813 2973 16888 33770 27055 27055 1 9606 Homo sapiens 0.030757948781683808 LVGPEVR Unmodified 768.44939 0.4493882 2219 B4DGN8;B2R5M9;Q02809;Q02809-2 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes no 0 0 0 5 0.816 1 1 1 41.414 41.488 2 0.010649 10125 20230619_1885_Aki_TMTPro18x_K_F5 117.7 73.088 191850 145710 171100 187600 280770 312880 263290 252780 327100 219530 267540 298100 272070 220500 260510 286940 303920 287040 177160 133780 177330 187560 282650 305420 268250 261450 326890 226260 277720 296470 276990 233490 267640 287220 290250 272690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 270910000 17814 2219 16889 33771;33772;33773 27056 27056 1 9606 Homo sapiens 0.055901480428588 LVGQGASAVLLDLPNSGGEAQAK Unmodified 2194.1594 0.15936077 1085 A0A0S2Z410;Q99714;A0A804HHW5;Q99714-2;Q5H928;A0A0S2Z434 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 8 0 1 62.085 62.113 3 2.3752E-13 18673 20230619_1888_Aki_TMTPro18x_K_F8 132.83 126.1 451550 358260 453640 508770 464750 575550 537590 589560 746590 516310 512920 602240 660120 588820 556350 800610 721490 729080 417480 329230 461270 502150 484650 576880 544180 599230 738860 528850 544240 607420 664680 618720 578020 796360 688770 693210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2569100000 17815 1085 16890 33774 27057 27057 1 9606 Homo sapiens 0.11004746764456286 LVGSDQAPGR Unmodified 998.51451 0.51450765 3969 Q3YEC7;Q3YEC7-2;F2Z2T0;Q3YEC7-3;Q3YEC7-4;Q3YEC7-5;Q3YEC7-6 RABL6 Rab-like protein 6 yes no 0 0 0 5 0 1 37.443 37.536 2 0.0020332 8522 20230619_1885_Aki_TMTPro18x_K_F5 98.033 79.302 19809 14618 22095 23059 24816 28195 24142 19787 27750 24909 33008 38261 38176 31828 30123 22748 43195 41489 18323 13455 22302 22641 25546 27917 24491 20957 28264 25322 33873 37976 38419 32588 31448 24082 41191 39214 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25609000 17816 3969 16891 33775 27058 27058 1 9606 Homo sapiens 0.015190977780434878 LVGSQEELASWGHEYVR Unmodified 1958.9486 0.94863972 3840 Q59EG8;Q13200;Q9NSM5;Q13200-3;H7C2Q3 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 6 0.816 1 1 1 55.385 55.452 3 3.2256E-48 16210 20230619_1886_Aki_TMTPro18x_K_F6 276.18 244.76 65114 55929 64627 73685 61850 74635 75453 69091 68656 112550 128440 145540 142330 105280 92317 117050 128190 154690 60224 51340 65718 72946 64845 75260 75125 72172 72862 112310 129630 144770 142330 110660 96876 119460 122480 146430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 539050000 17817 3840 16892 33776;33777;33778 27059 27059 1 9606 Homo sapiens 0.007523342330387095 LVGYLDR Unmodified 834.45995 0.45995289 58 Q53FJ5;A0A024QZQ2;Q59EN5;P07602;P07602-2;P07602-3;B4DEK5;B4DRB7;Q5BJH1 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes no 0 0 0 7.5 0.5 1 1 50.815 50.892 2 0.024502 13976 20230619_1887_Aki_TMTPro18x_K_F7 99.139 40.893 540600 395500 439050 511610 556810 688770 638480 623190 719280 504460 499090 588540 508380 436770 574930 546470 606410 624320 498770 363200 456860 509270 572110 681180 641120 637950 718800 519070 523700 588310 521950 461390 585030 551820 580030 592100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 471810000 17818 58 16893 33779;33780 27060 27060 1 9606 Homo sapiens 0.03610130697268232 LVHANFGTK Unmodified 985.53451 0.53451481 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TLN0 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 2.5 0.5 1 1 42.956 43.03 3 4.517E-07 10908 20230619_1882_Aki_TMTPro18x_K_F3 191.1 155.66 1290700 973070 1126100 1013800 1198400 1297500 906080 851960 1277300 624050 654290 501910 643320 481080 670600 649360 698420 440170 1191600 891660 1157500 1024600 1232300 1280900 942150 895440 1253800 641090 699160 515330 658140 505910 682740 638330 666180 421240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1382200000 17819 1817 16894 33781;33782 27061;27062 27062 2 9606 Homo sapiens 0.04116893508660269 LVHGDIFRPPR Unmodified 1305.7306 0.73058886 9 B3KSG9;A0A024QYR8;Q99805 TM9SF2 Transmembrane 9 superfamily member 2 yes no 0 0 1 4.5 0.5 1 1 42.608 42.672 4 1.5622E-09 10708 20230619_1883_Aki_TMTPro18x_K_F4 164.64 139.72 73705 46182 67378 65077 59194 66489 79673 77818 91493 88705 91711 85913 107050 80294 82551 101500 102350 101610 68005 42480 68844 64202 62712 67367 79512 78999 92547 88978 94694 87200 107550 84192 85569 101610 97731 96511 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 48726000 17820 9 16895 33783;33784 27063;27064;27065 27064 3 9606 Homo sapiens 0.08995278682550634 LVHPGVAEVVFVK Unmodified 1392.8129 0.8129215 4336 Q96DI9;Q9BY77;F6VRR5;B4E0L0;Q9BY77-2;B4DMM2 POLDIP3 Polymerase delta-interacting protein 3 yes no 0 0 0 2 0 1 55.442 55.463 3 0.001289 16783 20230619_1881_Aki_TMTPro18x_K_F2 81.565 53.552 291250 233760 266980 296990 284160 310250 296030 305920 331520 356210 317590 305410 351470 308020 294610 364480 318950 384850 269090 214550 273650 294890 294180 312630 298960 314120 335480 355740 327880 312470 355010 320710 302340 366290 305390 365070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222810000 17821 4336 16896 33785 27066 27066 1 9606 Homo sapiens 0.13222755970832623 LVHPTDK Unmodified 808.4443 0.44430282 4154 Q7L576;X5D2F4;A0A087WVZ5;B3KWV6;A0A0G2JQT1;A0A0G2JR96;E7EVJ5;Q96F07;Q96F07-2;H7C229;B7Z8N7;A0A8V8TNU3;B7Z4I3;B7Z217;E7EW33;Q9NSN1 CYFIP1;CYFIP2;DKFZp761H087 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 6 0 1 36.195 36.255 3 0.030288 8073 20230619_1886_Aki_TMTPro18x_K_F6 69.198 35.12 62791 30387 71322 72406 80567 76049 70533 82297 79372 65429 91840 101730 85386 75718 81000 54733 105550 100390 57978 28212 71863 69653 82566 76716 72042 83184 80786 68118 93425 100670 87175 77885 83641 57987 100720 94890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31655000 17822 4154 16897 33786 27067 27067 1 9606 Homo sapiens 0.032418441802292364 LVHSYPYDWR Unmodified 1334.6408 0.6407708 2081 A8K5W7;Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 0 1 0 1 48.126 48.126 3 8.7074E-05 13557 20230619_1880_Aki_TMTPro18x_K_F1 132.32 108.94 43155 32517 36711 38416 40504 48827 45246 47263 52344 49833 49990 42427 50606 46279 53123 49757 47193 50801 39836 29831 37903 38455 41954 48538 45567 48435 52831 50015 51390 43567 51761 47794 53631 50021 45237 48227 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104920000 17823 2081 16898 33787 27068 27068 1 9606 Homo sapiens -0.013163957167080298 LVICPDEGFYK Unmodified 1339.6482 0.64822394 305 A0A024R4T4;P61081;M0QYI6 UBE2M NEDD8-conjugating enzyme Ubc12 yes no 0 0 0 6.5 0.5 1 1 60.738 60.788 2;3 0.0001997 18427 20230619_1886_Aki_TMTPro18x_K_F6 111.27 95.509 137610 109600 130370 136440 131680 157530 129030 140160 161310 170730 165300 189910 194380 154030 175020 207300 172490 202410 127170 100580 133090 135850 136770 157280 131330 145180 162800 171470 170850 190660 196450 162920 178360 207080 165270 192190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 222690000 17824 305 16899 33788;33789 27069;27070 27069 2 9606 Homo sapiens -0.008014242312810893 LVIDEPAK Unmodified 883.50148 0.50148335 2314 B2RDE8;A0A384NPW1;P51858;A8K8G0;B7Z958;B7Z525;P51858-2;P51858-3 HDGF Hepatoma-derived growth factor yes no 0 0 0 4 0.816 1 1 1 50.132 50.167 2 2.189E-05 13827 20230619_1885_Aki_TMTPro18x_K_F5 136.16 65.243 258480 199830 188600 241000 220300 330520 226040 245840 365080 316380 303900 403540 431480 364320 230090 535260 523420 469260 238390 183340 198290 241020 227640 325260 231820 258830 361680 318870 320620 404440 427140 385950 255360 530470 497590 446600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1622199999.9999998 17825 2314 16900 33790;33791;33792 27071;27072;27073 27073 3 9606 Homo sapiens 0.055072666659384595 LVIDVIR Unmodified 826.52764 0.52763852 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 5.33 3.09 1 1 1 56.697 56.735 2 0.026048 16434 20230619_1888_Aki_TMTPro18x_K_F8 97.068 7.3942 253010 225270 250190 259440 226750 278360 264210 267310 290070 299620 283890 289320 314430 276330 288220 333930 311730 327260 234060 206480 254120 259520 238620 279780 265120 274710 293950 300770 292960 293770 318780 288490 295090 334150 298140 310840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 463570000 17826 1432 16901 33793;33794;33795 27074;27075 27075 2 9606 Homo sapiens 0.10743580628093241 LVIEEAER Unmodified 957.51311 0.51311067 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 2.5 1.12 1 1 1 1 46.217 46.267 2 0.00016432 12786 20230619_1880_Aki_TMTPro18x_K_F1 171.38 34.206 842100 710410 705930 774730 823670 913910 829300 802350 1009700 920460 921400 913090 1014400 854230 859260 1054700 982190 987570 777770 650950 730600 779080 847040 911300 841290 830580 1015000 924100 953410 925550 1025100 893680 884360 1052400 938600 938690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2654000000 17827 3622 16902 33796;33797;33798;33799 27076;27077;27078 27076 3 9606 Homo sapiens 0.032654636892857525 LVIIEGDLER Unmodified 1155.6499 0.6499385 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;A0A494C0P6;Q6LDX7;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;P06753-7;Q8NAH0;Q5VU62 TPM3;DKFZp686J1372;TPM3-ROS1;HEL-S-82p Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor no no 0 0 0 3 0.816 1 1 1 59.48 59.495 2 1.941E-13 18186 20230619_1882_Aki_TMTPro18x_K_F3 220.71 172.97 411500 311320 356910 432830 340350 471280 436910 432290 503670 504960 474810 502440 544720 462940 427370 594170 479510 590430 379900 286080 367470 427400 358380 472390 436960 446300 508360 506420 491660 508890 548180 485800 440500 594240 459060 560430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 725480000 17828 1095;1096 16903 33800;33801;33802 27079;27080 27079 2 9606 Homo sapiens 0.07833952849000525 LVIIESDLERAEER Unmodified 1670.8839 0.88391419 3083;2862 P09493-3;D9YZV5;P09493-4;Q15657;P09493-10;A0A0K0K1I0;P09493-8;Q8TCG4;P09493-9;H0YKX5;P09493;D9YZV4;Q6ZN40;A0A0S2Z4G6;P09493-6;H0YL42;H7BYY1;B7Z596;F5H7S3;Q1ZYL5;P09493-2;B7Z722;D9YZV7;P09493-5;A0A494BZZ2;H0YKJ4;H0YK48;Q59GR8;A0A024R5W6;P09493-7;A0A994J554;A0A494C0V8 TPM1 Tropomyosin alpha-1 chain no no 0 0 1 2 0 1 60.253 60.264 3 1.8031E-16 18759 20230619_1881_Aki_TMTPro18x_K_F2 207.8 81.91 79397 69310 79719 86408 142010 152510 150420 144190 172300 114140 103270 90637 120490 93920 110650 129950 106500 106530 73450 63582 81981 86711 142760 148980 151680 146970 171420 116380 109890 93322 121930 98709 112570 128650 101940 101430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87680000 17829 2862;3083 16904 33803 27081;27082 27082 2 9606 Homo sapiens 0.07530759427027078 LVILANNCPALR Unmodified 1352.7598 0.75984008 568 A0A024R9D3;P62888;E5RI99;E5RJH3 RPL30 60S ribosomal protein L30 yes no 0 0 0 5 0.816 2 2 2 57.652 57.696 2;3 8.21E-18 17372 20230619_1883_Aki_TMTPro18x_K_F4 291.2 254.86 418500 354040 395620 416910 359440 403600 431740 424870 459210 501540 414070 397230 530930 393460 385070 561140 470020 468160 386880 324640 403380 415820 378220 409700 432040 434630 464990 499520 431860 408060 530920 415100 399790 555450 448880 445650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4058899999.9999995 17830 568 16905 33804;33805;33806;33807;33808;33809 27083;27084;27085 27083 3 9606 Homo sapiens 0.09757054916508423 LVILEGELER Unmodified 1169.6656 0.66558856 3746;3405 P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72;U3KQK2;Q5TCU3;P07951;V9HW25;CON__Q3SX28;A7XZE4;P07951-2;B4DGC2;P07951-3;B4E3P1 TPM4;HEL-S-108;TPM2;HEL-S-273;TPM2b Tropomyosin alpha-4 chain;Tropomyosin beta chain no no 0 0 0 3 0.816 1 1 1 61.652 61.666 2 1.5336E-06 19109 20230619_1882_Aki_TMTPro18x_K_F3 192.6 147.97 + 642760 486220 556720 666080 607450 806990 854730 818040 1004100 856790 806610 873320 951800 764500 722700 962910 807180 991090 593400 446730 574530 659500 634950 804990 851490 835890 1006300 864610 843480 882080 955720 802980 744980 965270 772760 940370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 438640000 17831 3746;3405 16906 33810;33811;33812 27086;27087 27086 2 9606 Homo sapiens 0.0875423936606694 LVINGNPITIFQER Unmodified 1612.8937 0.89369102 3382 V9HVZ4;P04406;Q2TSD0;P04406-2;Q0QET7;B4DRV9 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 3.33 0.471 2 1 66.958 67.012 3 6.6642E-09 19700 20230619_1882_Aki_TMTPro18x_K_F3 159.66 135.91 79693 77444 128250 86075 41229 126990 127790 93166 132400 97611 109260 139590 136870 99368 152600 124620 107960 111760 74148 70940 124820 86840 52511 124330 123940 97738 133500 99776 114690 138360 139400 105170 152270 124220 103750 106270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1277900000 17832 3382 16907 33813;33814;33815 27088;27089 27088 2 9606 Homo sapiens 0.11175992223047615 LVINGNPITIFQERDPSK Unmodified 2040.1004 0.10038933 3382 V9HVZ4;P04406;Q2TSD0;P04406-2;Q0QET7;B4DRV9 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 1 3.6 2.24 2 2 1 61.45 61.471 3;4 1.1096E-23 18988 20230619_1882_Aki_TMTPro18x_K_F3 200.94 174.81 4222500 4387300 4488500 4056100 3841800 3999800 4268400 4499800 4049800 5243500 5086400 4489000 5149300 5146600 4568000 6620600 4329400 5583000 3913000 4011900 4524400 4128400 4049000 4064700 4276500 4581000 4185300 5234400 5168700 4619300 5229900 5360900 4654400 6565300 4153300 5309100 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 7102399999.999999 17833 3382 16908 33816;33817;33818;33819;33820 27090;27091;27092;27093;27094;27095 27093 6 9606 Homo sapiens 0.12194315260717303 LVINSGNGAVEDR Unmodified 1342.6841 0.68409218 1496 P16070;P16070-11;H0YD13;B4DN59;A8K309;A0A385KNS5;P16070-7;P16070-12;P16070-14;P16070-13;P16070-8;P16070-10;P16070-17;P16070-3;P16070-16;P16070-6;P16070-4;P16070-18;P16070-5;H0Y2P0;H0YE40;B4E2X0;J3KN83 CD44 CD44 antigen yes no 0 0 0 3 0 1 44.628 44.701 2 0.013886 11693 20230619_1882_Aki_TMTPro18x_K_F3 70.488 54.598 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17834 1496 16909 33821 27096 27096 1 9606 Homo sapiens 0.026457492699364593 LVINTEEVFRPYAK Unmodified 1677.909 0.90900673 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 2.5 0.5 2 2 59.174 59.195 3;4 2.5291E-22 18096 20230619_1882_Aki_TMTPro18x_K_F3 234.04 205.06 117560 91287 106730 111860 98576 112280 119200 116460 120580 134870 127660 134280 146880 118660 125540 158770 142520 159220 108590 83764 109240 111300 103620 113600 119060 119190 123150 135260 131540 135830 148250 125070 129160 158820 136310 151160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 251630000 17835 3758 16910 33822;33823;33824;33825 27097;27098 27098 2 9606 Homo sapiens 0.0971685902027275 LVIPSELGYGER Unmodified 1331.7085 0.70851601 1472 Q53XJ5;A0A384NLA0;A0A494C1N0;P26885 FKBP2 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase FKBP2 yes no 0 0 0 6 0.816 1 1 1 58.398 58.458 2 4.9355E-13 17440 20230619_1886_Aki_TMTPro18x_K_F6 211.53 170.08 167680 137330 148680 168690 139420 161740 168550 167630 181950 188040 179000 190310 196940 164220 188790 216130 193370 220340 154910 125990 152610 167690 146440 164210 168700 171430 184570 188980 184690 192210 200020 173030 192540 216510 185160 209140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 405360000 17836 1472 16911 33826;33827;33828 27099;27100 27100 2 9606 Homo sapiens 0.05593009423478179 LVIQSYFVQTLK Unmodified 1437.8232 0.82315184 1975 A6NIR2;X6R7Y7;Q9Y547 HSPB11 Intraflagellar transport protein 25 homolog yes no 0 0 0 6 0 1 63.573 63.621 3 1.0648E-05 19739 20230619_1886_Aki_TMTPro18x_K_F6 130.99 94.708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17837 1975 16912 33829 27101 27101 1 9606 Homo sapiens 0.1217531890540613 LVIVGDGACGK Unmodified 1087.5696 0.56957969 220 P61586;A0A024R324;B4DKN9;A0A994J514;P08134;A0A024R0C8;Q5JR08;A0A7I2YQV1;Q5JR05;C9JX21;E9PQH6;C9JNR4;A0A7I2V3G1;Q5JR07;E9PLA2;E9PN11;Q5JR06;C9JRM1;U3KQV3;U3KQA9;A0A7I2V5E6 RHOA;RHOC Transforming protein RhoA;Rho-related GTP-binding protein RhoC yes no 0 0 0 7.5 0.5 2 2 52.099 52.174 2;3 4.3588E-06 14455 20230619_1888_Aki_TMTPro18x_K_F8 185.6 127.51 480070 389000 428230 444730 450140 510170 510030 482780 534220 580230 547010 535200 639500 507610 530310 683710 621810 651550 443490 356650 439790 445530 467610 510370 511520 497700 543830 579780 564570 544670 644380 534040 547090 681940 594260 619080 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1377100000 17838 220 16913 33830;33831;33832;33833 27102;27103 27103 2 9606 Homo sapiens 0.02929768254307419 LVKPGNQNTQVTEAWNK Unmodified 1925.9959 0.99592426 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2;F8VR77;F8W0A3;H0YIN7 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 1 2.5 0.5 2 2 49.891 49.958 3;4 2.6806E-23 14096 20230619_1882_Aki_TMTPro18x_K_F3 206.1 184.3 533550 479140 589160 573170 540360 613020 613660 607410 583980 624250 677750 517990 486310 352750 722600 344770 356680 240330 494080 439320 593060 571830 566860 616760 613900 621340 600310 626430 681970 525010 512620 369090 708320 342170 344000 229800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1544799999.9999998 17839 654 16914 33834;33835;33836;33837 27104;27105 27105 2 9606 Homo sapiens 0.06996613504020388 LVLADLLEPVK Unmodified 1208.738 0.73802523 2653 B4E343;Q9BVJ6;Q9BVJ6-3;O60531 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 0 0 0 8 0 1 64.846 64.866 2 0.0020765 19881 20230619_1888_Aki_TMTPro18x_K_F8 101.65 92.527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17840 2653 16915 33838 27106 27106 1 9606 Homo sapiens 0.14200573439597974 LVLDPYLLK Unmodified 1072.6532 0.65323296 3101 Q8IY71;I3L0E3;Q9Y2R5;E9PE17 MRPS17;hCG_1984214 28S ribosomal protein S17, mitochondrial yes no 0 0 0 2 0 1 63.536 63.545 2 0.0016101 20201 20230619_1881_Aki_TMTPro18x_K_F2 103.56 64.541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17841 3101 16916 33839 27107 27107 1 9606 Homo sapiens 0.11981247693643127 LVLDSVK Unmodified 772.46945 0.46945494 2886 E5RIW3;Q6FGD7;E5RJD8;O75347;E5RHG6;E5RIX8 TBCA Tubulin-specific chaperone A yes no 0 0 0 7.5 0.5 1 1 52.986 53.059 2 0.0072494 14883 20230619_1888_Aki_TMTPro18x_K_F8 132.29 21.007 1545300 1207400 1356400 1335500 1309500 1733200 1477000 1403000 1933000 876830 1007300 640570 734760 636360 1026000 1007000 942270 601260 1427100 1106800 1393100 1343700 1371900 1714300 1492900 1442200 1902400 909690 1063100 663350 772960 675650 1033400 983420 900010 576630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1018399999.9999999 17842 2886 16917 33840;33841 27108 27108 1 9606 Homo sapiens 0.07411898982809362 LVLDSVKLEA Unmodified 1085.6332 0.6332258 2886 E5RIW3;Q6FGD7;E5RJD8;O75347;E5RHG6;E5RIX8 TBCA Tubulin-specific chaperone A yes no 0 0 1 6.33 0.471 2 1 61.349 61.398 2;3 0.0034352 18719 20230619_1886_Aki_TMTPro18x_K_F6 99.802 55.355 452860 493850 472430 423420 437690 388970 446380 423260 347960 470020 463720 341370 409090 301330 514710 363450 351130 277690 419770 451280 477290 433640 456490 397500 446910 431360 365250 468210 467450 351260 423650 315650 511650 360010 337040 264930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1567099999.9999998 17843 2886 16918 33842;33843;33844 27109;27110 27109 2 9606 Homo sapiens 0.09383451963026346 LVLEQVVTSIASVADTAEEK Unmodified 2101.1154 0.11543027 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6 IPO5;RANBP5 Importin-5 yes no 0 0 0 4.33 1.7 1 1 1 67.571 67.601 3;4 3.5276E-08 21383 20230619_1886_Aki_TMTPro18x_K_F6 116.6 98.688 11766 7870.1 9864.8 9754.3 14155 11315 14822 12819 11658 10312 15784 9715.8 9108 8370.9 11383 12434 11506 11260 10853 7227 10240 9720.8 14340 11368 14804 12927 12202 10535 15671 9878.3 9617.4 8890.1 11549 12360 11006 10708 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 10562000 17844 782 16919 33845;33846;33847 27111;27112 27112 2 9606 Homo sapiens 0.108917175474744 LVLETLSK Unmodified 901.54843 0.54843354 1061 A0A0S2Q0B1;O14497;O14497-2;H0Y488;A0A1B0GTU5;O14497-3;Q96SM7;Q8NC65;Q96T01;Q96SY8 ARID1A AT-rich interactive domain-containing protein 1A yes no 0 0 0 1 0 1 58.698 58.698 3 0.0085923 17981 20230619_1880_Aki_TMTPro18x_K_F1 79.713 39.668 37964 30266 37713 35918 32549 40494 40817 37632 43805 47793 49408 41712 50009 40577 42056 54142 51972 50355 35097 27761 38250 35881 34473 40530 40776 38916 44695 47572 50396 42624 50635 42624 43520 53940 49619 47874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58352000 17845 1061 16920 33848 27113 27113 1 9606 Homo sapiens 0.09372126217090226 LVLEVAQHLGESTVR Unmodified 1649.9101 0.91006937 3391 Q0QEN7;V9HW31;P06576 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 8 0 1 61.169 61.201 3 8.354800000000001E-20 18273 20230619_1888_Aki_TMTPro18x_K_F8 238.06 215.14 53749 45337 52423 45463 58223 61963 58584 57912 57715 71243 55191 53909 50695 58203 75521 58342 67143 55787 49699 41513 53406 46164 59997 61344 59033 59763 58850 70745 56604 55623 53165 59851 75795 58553 64244 53055 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88096000 17846 3391 16921 33849 27114 27114 1 9606 Homo sapiens 0.11111073389133708 LVLLFSGK Unmodified 875.54804 0.54803961 3920 Q6FGV9;Q15126 PMVK Phosphomevalonate kinase yes no 0 0 0 5.5 0.5 1 1 63.43 63.478 2 0.0071512 19688 20230619_1886_Aki_TMTPro18x_K_F6 108.46 53.936 298650 275430 274690 298270 261340 338780 298070 313580 359740 152150 158810 123890 144550 112900 234950 192380 184990 156130 276190 252280 281030 299960 274040 338840 300260 317780 354260 161940 171750 127090 152290 121050 234320 190140 177280 148790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136550000 17847 3920 16922 33850;33851 27115 27115 1 9606 Homo sapiens 0.1052875128790447 LVLLGESAVGK Unmodified 1084.6492 0.64921022 164;203;642 A0A024R1U4;P51148;P51148-2;K7ERI8;K7ERQ8;F8VVK3;F8VVZ0;F8VUA5;F8VWU4;F8WCY6;F8WD79;F8VPW9;F8VSF8;F8VWZ7;A0A024R2K1;P20339-2;P20339;A0A0A1HAN9;A0A024RB09;P61020-2;P61020 RAB5C;RAB5B;RAB5A Ras-related protein Rab-5C;Ras-related protein Rab-5A;Ras-related protein Rab-5B no no 0 0 0 4.5 3.5 1 1 61.329 61.345 3 0.00092808 19044 20230619_1880_Aki_TMTPro18x_K_F1 91.549 60.985 172910 150840 176170 196830 164350 201460 182380 192260 217540 209410 205500 217850 246150 209220 200780 264120 241460 264190 159980 138440 178650 195020 172320 203090 184010 197510 219220 211010 213250 220540 247820 219010 207570 264330 230790 250840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 397340000 17848 164;203;642 16923 33852;33853 27116;27117 27116 2 9606 Homo sapiens 0.11027158199954101 LVLPMIK Unmodified 812.51938 0.51938202 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6 IPO5;RANBP5 Importin-5 yes no 0 0 0 5 0 1 62 62.049 2 0.0027918 18813 20230619_1885_Aki_TMTPro18x_K_F5 123.34 46.745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17849 782 16924 33854 27118 27118 1 9606 Homo sapiens 0.10562310387115303 LVLPPPDPLDLPLR Unmodified 1553.9181 0.91811486 1304 Q15477;A0A8V8TLC0;A0A1U9X8J0;A0A1U9X8J1;A0A1U9X8J2;A0A1U9X8J6;Q96BC0;O76046;Q9NPK3;A0A8V8TL97;H7C4L3;H7C5N0;A0A8V8TLA2;A0A1U9X8I7;A0A1U9X8I9;B4DSY1;A0A024RCU1;A0A8V8TLR3;A0A8V8TMR3;B4E0B4;B4DF09;F8WDE8 SKIV2L;SKI2W Helicase SKI2W yes no 0 0 0 8 0 1 64.435 64.456 2 5.3886E-07 19699 20230619_1888_Aki_TMTPro18x_K_F8 142.83 119.4 26545 25499 27197 29217 32042 31915 33136 28991 35881 31784 30135 33512 33922 29795 35432 35611 31336 35472 24577 23365 27657 29239 32897 32019 33418 29910 36174 32037 31392 33807 34577 31159 35780 35687 30051 33678 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 43921000 17850 1304 16925 33855 27119;27120 27119 2 9606 Homo sapiens 0.16331252376585326 LVLQDHQAFR Unmodified 1225.6568 0.65675521 875 G1UI29;A0A087X0E3;A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 SRCAP Helicase SRCAP yes no 0 0 0 8 0 1 43.755 43.765 3 4.0886E-07 11005 20230619_1888_Aki_TMTPro18x_K_F8 173.14 118.59 40233 26867 37281 41949 31130 45405 43254 50694 60819 43830 49353 53834 60474 53767 45941 55503 60403 56506 37137 24736 38070 41154 33271 45716 43461 51220 60443 45002 51675 54205 60711 55540 47818 55784 57626 53673 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17859000 17851 875 16926 33856 27121 27121 1 9606 Homo sapiens 0.05295310520205021 LVLTQEQLHQLHSR Unmodified 1700.9322 0.93220179 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;E7EWF7 DCTN1;DKFZp686I0746 Dynactin subunit 1 yes no 0 0 0 1 0 1 43.34 43.34 4 1.5621E-11 11588 20230619_1880_Aki_TMTPro18x_K_F1 176.25 148.6 14165 31726 21303 21676 17985 23704 21019 18381 17387 21176 21043 20271 18321 18281 22672 18031 26319 24461 13295 28908 21005 22781 19023 23729 20915 19234 18080 21220 21308 20543 19014 18911 23151 18499 25134 23172 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55984000 17852 1717 16927 33857 27122 27122 1 9606 Homo sapiens 0.10977297857607482 LVLVGDGGTGK Unmodified 1014.571 0.5709599 2668 B5MDF5;P62826;J3KQE5;H0YFC6;Q96QB7;Q0EFC9 RAN;TC4 GTP-binding nuclear protein Ran yes no 0 0 0 6 2.37 1 1 2 3 3 53.15 53.223 2;3 1.4452E-08 14767 20230619_1888_Aki_TMTPro18x_K_F8 205.83 49.48 1863600 1432200 1578900 1659200 1884200 1930000 1882800 1808700 1992300 2251600 2398000 2347400 2537700 2142800 2122000 2558900 2501300 2482400 1720400 1313500 1632500 1660900 1932300 1929100 1902100 1868000 2041200 2254400 2446800 2372200 2565700 2239000 2188400 2559400 2389500 2358700 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 10819000000 17853 2668 16928 33858;33859;33860;33861;33862;33863;33864;33865;33866;33867 27123;27124;27125;27126;27127;27128;27129 27129 7 9606 Homo sapiens 0.06425725614735711 LVLVSPTSEQYDSLLR Unmodified 1818.9727 0.9727292 155 A0A024R1S5;O00178 GTPBP1 GTP-binding protein 1 yes no 0 0 0 8 0 1 62.577 62.602 3 5.9341E-26 18914 20230619_1888_Aki_TMTPro18x_K_F8 176.43 149.4 119920 108060 143760 146060 116200 137840 145840 131330 154590 142970 130880 142920 149030 138550 145850 160920 139380 170070 111140 99201 143670 144260 123670 139820 145610 135020 156060 143910 136320 144930 151450 144220 148100 161820 133630 161320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196370000 17854 155 16929 33868 27130 27130 1 9606 Homo sapiens 0.09600174666707062 LVLWDINK Unmodified 999.57532 0.57531699 2846 D6RCD0;Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes no 0 0 0 2 0 1 62.655 62.664 2 0.0032072 19794 20230619_1881_Aki_TMTPro18x_K_F2 128.1 70.605 143550 130170 143110 140320 174610 248760 206890 194810 248330 85388 63599 59298 68449 54103 121710 83285 77021 59684 132830 119240 145990 142310 180220 241910 207770 199750 242770 91727 74270 61331 72274 57531 120140 82033 74005 57002 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70156000 17855 2846 16930 33869 27131 27131 1 9606 Homo sapiens 0.07551234828270026 LVMAAANR Unmodified 844.45891 0.45890703 3658 P55084-2;P55084;B4DY96;B5MD38;F5GZQ3;B4DDC9 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 2.5 0.5 1 1 42.166 42.237 2 0.023247 10850 20230619_1881_Aki_TMTPro18x_K_F2 86.113 60.376 150500 132850 143150 154720 234760 282770 213660 216730 352290 75615 74377 82651 85177 75431 122690 80344 85980 83602 139180 121780 147540 156080 236500 274580 220580 222100 339080 84834 89978 83442 88507 78295 121840 80990 82603 79380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92539000 17856 3658 16931 33870;33871 27132 27132 1 9606 Homo sapiens 0.030455930567200085 LVMAGETTNSR Oxidation (M) 1193.571 0.57103625 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;A0A7I2V311;B3KVA0 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 1 0 5 0 1 36.428 36.52 2 0.024951 8098 20230619_1885_Aki_TMTPro18x_K_F5 91.087 68.016 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17857 442 16932 33872 27133 27133 271 1 9606 Homo sapiens -0.018006424476197935 LVMEEAPESYK Unmodified 1294.6115 0.61150408 4728 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 3 0.816 1 1 1 53.338 53.372 3 0.0020102 15683 20230619_1882_Aki_TMTPro18x_K_F3 81.017 57.502 355460 309760 354740 330640 314250 373900 372360 396280 460810 390190 416280 412790 449990 359780 439740 473340 422570 430930 328810 283740 359700 333040 331510 375360 374930 403010 462450 395440 430710 416460 457540 378900 446590 471390 404540 409710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 280160000 17858 4728 16933 33873;33874;33875 27134;27135 27134 2 9606 Homo sapiens -0.024017208478426255 LVNELTEFAK Unmodified 1162.6234 0.6233894 2776 CON__P02769 yes yes 0 0 0 6.5 0.5 1 1 62.439 62.483 3 0.00042318 18930 20230619_1887_Aki_TMTPro18x_K_F7 106.29 66.374 + 68053 164000 211830 74059 507910 617980 285080 279780 437970 187610 165380 194010 100260 137620 178170 180160 211590 320570 64791 149140 206950 89472 498560 575820 304710 306100 426180 195590 179940 194690 108680 146090 181710 188110 202880 302600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4003099999.9999995 17859 2776 16934 33876;33877 27136 27136 1 9606 Homo sapiens 0.04858263957657982 LVNGMGQSLIVSWSK Unmodified 1617.8549 0.85486267 2146 A8KA19;O43592;A0A024RB67 XPOT Exportin-T yes no 0 0 0 5 0 1 63.118 63.165 3 0.03255 19359 20230619_1885_Aki_TMTPro18x_K_F5 55.755 42.076 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17860 2146 16935 33878 27137 27137 1 9606 Homo sapiens 0.07064943597060847 LVNHFVEEFK Unmodified 1260.6503 0.65027285 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNV4 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 7.5 0.5 1 1 58.235 58.284 3 9.1999E-08 17078 20230619_1887_Aki_TMTPro18x_K_F7 189.57 146.83 314430 260280 302550 392270 388990 516860 450630 474610 543060 500650 420780 448620 552620 453300 372440 664910 280460 548010 290670 239320 310390 386590 399670 511770 453430 488220 543370 503180 443250 458270 551020 478590 378590 657300 271080 520760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5361800000 17861 1031 16936 33879;33880 27138 27138 1 9606 Homo sapiens 0.030373725688377817 LVNHFVEEFKR Unmodified 1416.7514 0.75138388 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNV4 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 1 2 0 1 54.103 54.131 4 9.8736E-05 16229 20230619_1881_Aki_TMTPro18x_K_F2 124.6 103.05 40368 57901 61912 67286 97730 69838 91943 60669 59779 39838 39893 25879 37698 21941 152100 23315 24339 22929 37667 53006 61647 67212 98054 70336 91944 62167 61904 40989 41950 26811 43786 22898 144890 23802 24513 21787 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78888000 17862 1031 16937 33881 27139 27139 1 9606 Homo sapiens 0.05967824271533573 LVNIVTENCS Unmodified 1147.5543 0.55432356 885 A0A087X0W9;Q8N6M0-2;Q8N6M0 OTUD6B OTU domain-containing protein 6B yes no 0 0 0 4 0 1 59.882 59.884 2 0.06719 18313 20230619_1883_Aki_TMTPro18x_K_F4 75.109 65.122 31881 26291 33143 33482 26672 35575 33665 33140 38987 28016 33715 31193 33929 29475 32086 37522 36907 33098 29490 24129 33475 33251 28453 35740 33711 33898 39157 28710 34834 31502 34547 30873 32955 37315 35239 31497 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69178000 17863 885 16938 33882 27140 27140 1 9606 Homo sapiens -0.013551433335578622 LVNLETTK Unmodified 916.52295 0.52294707 1950 A4L733;Q13087-2;Q13087;B3KQU2;B3KWF3 PDIA2 Protein disulfide-isomerase A2 yes no 0 0 0 7.5 0.5 1 1 50.984 51.061 2 0.00032726 13989 20230619_1888_Aki_TMTPro18x_K_F8 166.52 85.398 78263 69838 80858 82921 86739 105500 94845 92227 121200 83890 93884 113740 91481 81069 105500 114100 115150 106840 72429 64031 82043 82966 89955 104640 95947 94929 120760 86202 97677 113000 94168 86388 107610 113700 110020 101580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181480000 17864 1950 16939 33883;33884 27141 27141 1 9606 Homo sapiens 0.06134651694662807 LVNLETTKK Unmodified 1044.6179 0.61791009 1950 A4L733;Q13087-2;Q13087;B3KQU2;B3KWF3 PDIA2 Protein disulfide-isomerase A2 yes no 0 0 1 2 0 1 47.446 47.522 3 0.00055738 13300 20230619_1881_Aki_TMTPro18x_K_F2 101.38 66.994 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17865 1950 16940 33885 27142 27142 1 9606 Homo sapiens 0.09738585165860059 LVNLQHLDLLNNK Unmodified 1532.8675 0.86747627 4323 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 3 0 1 60.059 60.088 3 1.6858999999999998E-36 18463 20230619_1882_Aki_TMTPro18x_K_F3 282.62 241.89 474120 399730 425630 510480 431750 549170 542470 583880 608200 626370 557520 576370 540520 683760 260940 1038200 256710 722940 438120 366830 437160 506870 451660 552930 542600 595020 614110 629330 573320 592030 540410 719000 274680 1017500 248880 688280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32341000 17866 4323 16941 33886 27143 27143 1 9606 Homo sapiens 0.12235723051617242 LVNQEIEK Unmodified 971.52876 0.52876073 1883 A0A994J7I5;O75525-2;O75525 KHDRBS3 KH domain-containing, RNA-binding, signal transduction-associated protein 3 yes no 0 0 0 4.5 0.5 1 1 46.86 46.92 2 0.00034614 12553 20230619_1883_Aki_TMTPro18x_K_F4 180.45 76.012 106890 88970 110750 103390 76628 77519 103580 97855 132390 115330 180130 180330 142100 147040 154060 122230 199040 177930 98882 81575 111610 102970 82990 80874 103840 99129 134900 117610 180900 178950 147000 151380 158730 126470 189860 168490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205820000 17867 1883 16942 33887;33888 27144 27144 1 9606 Homo sapiens 0.04185750206318062 LVNQWIK Unmodified 899.52289 0.52288749 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;B4DN49;V9H023;V9H0D5;B4DL39;B4DSB9;V9H0B2 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 3.5 0.5 1 1 56.862 56.882 2 0.0078257 17018 20230619_1883_Aki_TMTPro18x_K_F4 122.15 41.156 190950 174540 195510 170810 198150 275870 196410 193300 287570 91551 80097 68815 83136 69653 138170 94055 76211 63118 176730 159740 198180 174280 206180 268990 200830 200410 278920 97779 92112 71076 87411 73088 135870 92552 73427 60325 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133510000 17868 3585 16943 33889;33890 27145;27146 27146 2 9606 Homo sapiens 0.06910696485317658 LVNSQGQLR Unmodified 1013.5618 0.56179219 4466 Q9BXW7-2;Q9BXW7 CECR5 Cat eye syndrome critical region protein 5 yes no 0 0 0 4.5 3.5 1 1 39.586 39.58 2 0.014305 9310 20230619_1888_Aki_TMTPro18x_K_F8 77.355 47.008 146750 105020 136100 147530 166100 183170 166010 178360 218660 114950 137840 132970 127580 109100 140860 129400 152200 130650 135500 96538 139670 145920 170260 182340 168960 180810 216190 120300 144770 133460 131230 114380 143560 129830 145370 124160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 80923000 17869 4466 16944 33891;33892 27147;27148 27148 2 9606 Homo sapiens 0.05555377049040544 LVNTGLLTLR Unmodified 1098.6761 0.67609367 2141 A8K9T8;Q9BYT8;B3KU23;E9PCB6;H0YAK4;Q96K48;Q8NDD9;H0YAF7 NLN;DKFZp564F123 Neurolysin, mitochondrial yes no 0 0 0 5.5 0.5 1 1 59.669 59.726 2 4.76E-05 17776 20230619_1885_Aki_TMTPro18x_K_F5 155.57 123.44 221820 189140 195020 202740 220460 271450 233520 249050 278860 185960 179340 145480 161410 138120 232150 188240 178850 161820 204960 173280 200810 204600 227680 268720 236060 254170 277290 190270 187840 149500 168680 145370 231630 187030 171520 154040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79989000 17870 2141 16945 33893;33894 27149 27149 1 9606 Homo sapiens 0.13070266811109832 LVNYPGFNISTPR Unmodified 1476.7725 0.77251325 4115 Q6NZY4;A8K559;Q6NZY4-2;F5H6J5;F5GX80 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes no 0 0 0 5 0 2 58.809 58.863 2;3 0.00019476 17442 20230619_1885_Aki_TMTPro18x_K_F5 88.075 76.492 35490 30383 35640 44424 45572 35062 36337 36246 39080 48629 43987 47958 48808 42147 43242 52929 51967 56825 32827 27923 36368 43563 46181 36230 37275 37300 39932 48441 45139 48502 49408 44245 44606 53202 49671 53914 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11153000 17871 4115 16946 33895;33896 27150;27151 27151 2 9606 Homo sapiens 0.05319789580403267 LVPDSDVR Unmodified 899.47125 0.47124585 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;B3KRA9 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 3 0 1 42.475 42.541 2 2.4485E-05 10694 20230619_1882_Aki_TMTPro18x_K_F3 152.34 91.376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17872 43 16947 33897 27152 27152 1 9606 Homo sapiens 0.017489080007635494 LVPEAVGDQK Unmodified 1054.5659 0.56587452 2568 B4DPV7;P49589-3;A8K067;B4DKY1;A0A024RCG3;P49589-2;P49589;A8MVQ3;B4DI19;Q53HG6 CARS Cysteine--tRNA ligase, cytoplasmic yes no 0 0 0 4.5 0.5 1 1 49.191 49.229 2 1.6359E-05 13638 20230619_1883_Aki_TMTPro18x_K_F4 180.8 118.08 45080 37855 37601 48821 41564 51450 50410 47568 53657 63211 72310 75027 69874 58649 68713 76088 72769 77832 41634 34743 38959 48415 43154 51723 50415 49302 55242 63380 73231 75076 71323 61956 70160 76256 69620 73888 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54168000 17873 2568 16948 33898;33899 27153;27154 27153 2 9606 Homo sapiens 0.040774217520947786 LVPGCDVR Unmodified 914.46439 0.46438634 2017 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 yes no 0 0 0 5 0 1 41.964 42.049 2 0.019567 10372 20230619_1885_Aki_TMTPro18x_K_F5 103.75 61.654 46079 37883 37782 43070 47439 55212 43006 48556 63673 54693 54489 65150 61537 51000 59334 53365 71261 57922 42546 34729 39247 43228 48479 54756 44261 50208 63329 55283 56720 65123 62486 53204 60988 53873 67974 55015 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29432000 17874 2017 16949 33900 27155 27155 1 9606 Homo sapiens 0.003732718485366604 LVPGGGATEIELAK Unmodified 1353.7504 0.75038083 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 6 0.816 1 1 1 57.554 57.615 3 3.8731E-09 17103 20230619_1886_Aki_TMTPro18x_K_F6 163.99 154.7 188330 144440 165710 200510 149740 210760 190970 172260 241810 203300 193560 232130 246330 215200 222080 257540 246440 300180 173900 132720 170250 197890 158400 211310 191660 179600 241490 204840 203450 233710 248670 224820 227810 260380 235930 284460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 846470000 17875 3621 16950 33901;33902;33903 27156;27157 27156 2 9606 Homo sapiens 0.08765565111957585 LVPGPVFGSK Unmodified 999.57532 0.57531699 1479 A8K7T4;A0A384NPY7;Q12907;B4DWN1;A0A8Q3WK65;D6RBV2;D6RIU4;D6RBH1 LMAN2 Vesicular integral-membrane protein VIP36 yes no 0 0 0 3.33 0.471 2 1 57.477 57.5 2;3 1.1167E-05 17247 20230619_1883_Aki_TMTPro18x_K_F4 150.35 128.89 122410 95877 106780 126920 115990 138300 133280 134030 149320 124130 128010 126050 132650 113470 138460 140420 149790 139090 113040 88044 110050 125730 120340 138840 133860 136960 150300 126080 132570 127500 135550 118890 141320 140600 143130 132160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159720000 17876 1479 16951 33904;33905;33906 27158;27159 27159 2 9606 Homo sapiens 0.07551234828292763 LVPGRHDIAFVEFDNEVQAGAAR Unmodified 2510.2666 0.26661981 2252 B2R802;P09012;M0R268;B4DDC7 SNRPA U1 small nuclear ribonucleoprotein A yes no 0 0 1 6 0 1 54.576 54.654 3 9.9795E-44 15854 20230619_1886_Aki_TMTPro18x_K_F6 222.54 194.93 40497 43332 42920 42457 42772 40323 44577 36786 36518 44399 38808 38229 42087 32132 51103 38052 46118 46440 37537 39639 43383 42954 44397 40911 44598 38062 37811 44258 39886 38863 43247 33701 51456 38652 44175 44019 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187940000 17877 2252 16952 33907 27160 27160 1 9606 Homo sapiens 0.07189716698667326 LVPGWTKPITIGR Unmodified 1436.8504 0.85036964 3600 Q53GL5;P48735;P48735-2;Q13584;B4DSZ6 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] yes no 0 0 1 7.5 0.5 1 1 57.599 57.652 3 2.2941E-06 16801 20230619_1888_Aki_TMTPro18x_K_F8 139.3 94.996 885270 808070 868800 895340 953060 1048300 649130 1413900 586100 744060 777990 507720 511230 434220 942610 536040 580520 235720 819050 740340 884960 899850 975040 1056700 673090 1398400 609260 779010 776530 524940 550200 455420 928590 521790 556550 228340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 422690000 17878 3600 16953 33908;33909 27161;27162 27162 2 9606 Homo sapiens 0.149418472364232 LVPHNESAWNYLK Unmodified 1569.794 0.79397698 2821 E9PQP6;D3DSY9;P49354;B3KVN2;P49354-2 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha yes no 0 0 0 2 0 1 54.089 54.117 3 6.5508E-05 16239 20230619_1881_Aki_TMTPro18x_K_F2 108.72 91.576 70452 61741 70999 70599 78075 96058 75599 80493 93103 72393 68229 69157 81598 56495 57182 85821 85093 87508 65178 56590 72190 70913 80575 94825 76920 83058 92848 73543 71735 69965 81651 60317 60274 85763 81163 83089 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121700000 17879 2821 16954 33910 27163 27163 1 9606 Homo sapiens 0.031871746091610476 LVPLDYGEDDK Unmodified 1262.603 0.60304789 3611 P49756 RBM25 RNA-binding protein 25 yes yes 0 0 0 4 0.816 1 1 1 57.432 57.464 2 1.0587E-05 17402 20230619_1882_Aki_TMTPro18x_K_F3 146.11 109.41 113810 94147 110480 113550 109640 130320 118840 120220 127050 137630 145760 149600 150120 126040 128360 165170 150690 161050 105220 86354 112520 113310 114270 130260 119600 123980 129780 138490 148870 150560 152040 132860 132350 165010 144040 152970 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 71200000 17880 3611 16955 33911;33912;33913 27164;27165;27166 27164 3 9606 Homo sapiens -0.01774951492825494 LVPLLDTGDIIIDGGNSEYR Unmodified 2159.111 0.1110136 3630 P52209-2;P52209;B4DL86;K7EM49;K7EMN2 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 5 0 2 69.592 69.638 3 2.2433E-66 20099 20230619_1885_Aki_TMTPro18x_K_F5 293.2 282.87 27864 22203 27106 31298 30441 42174 32440 36912 33033 36735 34745 35623 36371 32302 33426 44211 36896 46565 25755 20392 27662 30984 31474 41663 32626 38044 33717 37093 35649 36078 36907 34061 34241 44330 35335 44164 1 1 1 2 2 2 2 2 2 2 2 1 1 1 1 1 2 1 377110000 17881 3630 16956 33914;33915 27167;27168 27167 2 9606 Homo sapiens 0.07782253124514682 LVPLLDTGDIIIDGGNSEYRDTTR Unmodified 2632.3344 0.33442461 3630 P52209-2;P52209;B4DL86;K7EM49;K7EMN2 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 1 4.5 0.5 1 1 63.067 63.094 3 2.1097E-63 19343 20230619_1885_Aki_TMTPro18x_K_F5 282.86 264.96 55309 48463 52535 50761 61094 57664 58098 59847 57029 67460 62424 57963 63738 51602 62553 78995 70100 64325 51144 44385 53700 51205 62616 57887 58744 61169 58453 67449 63835 59105 64944 54886 64137 78070 66958 61273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36932000 17882 3630 16957 33916;33917 27169 27169 1 9606 Homo sapiens 0.08355077048145176 LVPLNQESVEER Unmodified 1411.7307 0.73070802 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2;H3BRD9;H3BV15 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 2.5 0.5 1 1 49.121 49.193 2 4.3222E-05 14056 20230619_1881_Aki_TMTPro18x_K_F2 132.85 77.3 103930 79943 116190 112740 105840 111060 118270 101240 141100 133310 138280 133080 164740 123500 110790 156980 144050 152700 96162 73469 116820 111130 111030 112210 119230 105030 142360 133050 143060 134830 164640 129560 115700 156830 137560 145050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 371730000 17883 4222 16958 33918;33919 27170 27170 1 9606 Homo sapiens 0.04131189101235577 LVPPECHCVR Unmodified 1265.6009 0.60089659 2649 H0Y9V7;B4E295;B4E2Q0;P98194-2;P98194-4;P98194;P98194-3;P98194-5;P98194-8;P98194-9;P98194-6;P98194-7 ATP2C1 Calcium-transporting ATPase;Calcium-transporting ATPase type 2C member 1 yes no 0 0 0 6 0 1 36.587 36.655 3 4.6819E-06 8186 20230619_1886_Aki_TMTPro18x_K_F6 134.23 128.26 26109 18701 29708 28541 36127 34194 32238 30355 36268 25894 35952 39011 36883 30238 36534 34866 47494 36637 24151 17208 29960 28079 36861 34062 32858 31171 36668 26826 36969 38719 37604 31720 37745 35072 45261 34819 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81597000 17884 2649 16959 33920 27171 27171 1 9606 Homo sapiens -0.021279819832443536 LVPPFKPQVTSETDTR Unmodified 1813.9574 0.95741349 1590 A0A7P0T8T9;A0A5K1VW74;Q9Y243;Q56A86;Q9Y243-2;A0A5F9ZGY0;A0A5F9ZHU3 AKT3 RAC-gamma serine/threonine-protein kinase yes no 0 0 1 1.5 0.5 1 1 52.404 52.423 3 9.6474E-06 15353 20230619_1880_Aki_TMTPro18x_K_F1 108.34 72.692 33836 28216 37537 36597 34183 32895 36510 34863 32311 43896 38929 39527 49172 36901 43256 55318 54408 60416 31319 25899 37759 36230 35767 33606 36572 35732 33494 43719 40091 40258 49557 39167 44772 55529 51991 57307 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59915000 17885 1590 16960 33921;33922 27172 27172 1 9606 Homo sapiens 0.08299307869469885 LVPQQLAH Unmodified 904.51305 0.51305109 1471;4101 P10606;A0A384NL93;Q6FHJ9 COX5B Cytochrome c oxidase subunit 5B, mitochondrial no no 0 0 0 7 0 1 46.395 46.483 2 0.0027029 11950 20230619_1887_Aki_TMTPro18x_K_F7 122.51 105.12 430780 392580 524760 527310 677610 709830 703160 657990 868610 357250 419880 366310 358380 294210 491990 424060 430160 384620 399340 360360 527660 523760 692030 702610 711990 667770 855820 378430 449160 369690 374200 312710 494140 422070 411860 365900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 456630000 17886 1471;4101 16961 33923 27173 27173 1 9606 Homo sapiens 0.05697508479931912 LVPSASVRPR Unmodified 1080.6404 0.64037687 4042 Q5JTZ9 AARS2 Alanine--tRNA ligase, mitochondrial yes yes 0 0 1 6 0 1 37.31 37.378 3 0.00021427 8494 20230619_1886_Aki_TMTPro18x_K_F6 120.76 99.017 43435 33635 43463 49638 58354 63262 56162 56173 66189 50547 61955 58181 57958 50203 56894 59754 63970 58147 40150 30927 44414 48961 59375 62754 57052 57723 66633 51652 63568 58487 59244 52541 58277 59802 61098 55267 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59578000 17887 4042 16962 33924 27174 27174 1 9606 Homo sapiens 0.10328229354126961 LVPTGLDFGQEGFTR Unmodified 1635.8257 0.82567103 3589 P46087;P46087-4;P46087-2;P46087-3 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 7.5 0.5 1 1 62.384 62.415 3 1.2863E-05 18838 20230619_1888_Aki_TMTPro18x_K_F8 110.97 98.017 127330 115900 133600 140320 117070 148630 140830 147490 158710 168780 165340 179590 183800 153200 160890 198690 174500 191410 117870 106270 135010 139830 123690 149600 141240 151310 161020 169730 170220 180930 185900 161300 164970 198420 166940 181820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 420190000 17888 3589 16963 33925;33926 27175 27175 1 9606 Homo sapiens 0.033191225723840034 LVPTHTQVPVHR Unmodified 1382.7783 0.77826733 4392 Q96RF0-2;Q96RF0-3;Q96RF0 SNX18 Sorting nexin-18 yes no 0 0 0 2 0 1 35.573 35.63 4 3.9468E-10 7930 20230619_1881_Aki_TMTPro18x_K_F2 188.96 159.66 45645 37148 37259 40660 37637 35786 41754 39540 61107 40033 47685 56907 42840 47153 38789 41258 60600 59404 42141 34044 38563 40730 39186 36676 42443 40178 60533 40988 49395 56627 43791 48615 40729 42568 57762 56235 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89873000 17889 4392 16964 33927 27176 27176 1 9606 Homo sapiens 0.10218932882730769 LVPVGYGIK Unmodified 944.5695 0.56950333 271 A0A024R3W7;P24534;A4D1M6 EEF1B2;LOC392793 Elongation factor 1-beta yes no 0 0 0 3.5 0.5 1 1 56.941 56.96 2 0.00012529 17026 20230619_1883_Aki_TMTPro18x_K_F4 151.51 62.92 817530 660940 694370 750240 774540 1040700 832960 863310 839450 473560 448870 428610 458480 390580 615350 571010 586260 513240 754950 605940 717410 754120 801400 1025700 836540 883590 838250 498810 479740 436590 475350 413660 621090 567810 560710 488360 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1314400000 17890 271 16965 33928;33929 27177;27178;27179 27179 3 9606 Homo sapiens 0.09500136316603403 LVPVGYGIR Unmodified 972.57565 0.57565135 2288;2925 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;H0YE58;E9PQC9;P29692;P29692-3;E9PK01;P29692-4;E9PQZ1 EEF1D Elongation factor 1-delta no no 0 0 0 4 0.816 1 1 1 53.093 53.143 2 9.509E-06 15422 20230619_1883_Aki_TMTPro18x_K_F4 174.64 113.84 1000000 984770 906980 885480 1310500 1795600 1147800 1225900 1839700 234480 179410 138630 225620 177070 640150 252800 235780 163260 925140 900470 935500 914630 1329400 1732800 1186600 1264400 1763800 291000 264730 147560 248930 185420 619150 249090 229000 156280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1015199999.9999999 17891 2288;2925 16966 33930;33931;33932 27180 27180 1 9606 Homo sapiens 0.0882665454812468 LVPVLSAK Unmodified 825.53239 0.53238955 1232 A0A140VK56;P37837-2;P37837;F2Z393 TALDO1 Transaldolase yes no 0 0 0 4 0 1 56.325 56.333 3 0.0099626 16815 20230619_1883_Aki_TMTPro18x_K_F4 75.38 41.583 68054 67321 58337 70713 94075 121440 88407 86926 144940 19482 20629 19874 16949 17952 33445 21877 19094 18109 62935 61633 60717 71773 95012 118110 91055 89368 139080 23608 26869 20164 18278 18765 32863 21752 18401 17244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143620000 17892 1232 16967 33933 27181 27181 1 9606 Homo sapiens 0.112644647708521 LVQAAQMLQSDPYSVPAR Oxidation (M) 1988.999 0.99896073 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4DKC9;B4DTM7;P18206-3 VCL;HEL114 Vinculin yes no 0 1 0 1 0 1 57.037 57.037 3 0.00018585 17285 20230619_1880_Aki_TMTPro18x_K_F1 75.239 66.42 31815 25119 32135 32516 36191 38957 33940 39843 45045 34903 40927 35743 35443 30474 38725 41493 37576 40209 29414 23061 32677 32318 37221 38921 34712 40486 45057 35578 41914 36112 36506 32189 39275 41439 35982 38195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31002000 17893 51 16968 33934 27182 27182 24 1 9606 Homo sapiens 0.044021205665330854 LVQAFQFTDK Unmodified 1195.6237 0.62372375 1476 A0A384NPQ2;Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5 PRDX1 Peroxiredoxin-1 yes no 0 0 0 2 0.816 1 1 1 61.185 61.198 3 2.0481E-07 18937 20230619_1880_Aki_TMTPro18x_K_F1 183.72 159.43 3088900 2339100 2607100 3056000 2723500 3370200 2998500 3078300 3254000 3393300 3555900 3270500 3778400 3125800 3736200 4090400 3620600 3680100 2851200 2148000 2693300 3030400 2831300 3376100 3016200 3173300 3313700 3408900 3642700 3323500 3846100 3280200 3795600 4071100 3465700 3499500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 12103000000 17894 1476 16969 33935;33936;33937 27183;27184;27185 27183 3 9606 Homo sapiens 0.03373683677500594 LVQAFQYTDEHGEVCPAGWK Unmodified 2334.0739 0.073916585 3538 V9HW12;P32119 HEL-S-2a;PRDX2 Peroxiredoxin-2 yes no 0 0 0 6.67 0.471 1 2 59.527 59.579 3;4 4.6968E-16 17995 20230619_1886_Aki_TMTPro18x_K_F6 151.95 135.26 34152 30037 32022 36137 28907 38540 33984 30781 44419 38736 42306 46402 50208 51475 36506 63698 65105 88036 31578 27544 32692 36017 30484 38601 34290 32219 44562 38995 43862 46967 50440 53580 39100 65071 62174 83275 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113170000 17895 3538 16970 33938;33939;33940 27186;27187 27186 2 9606 Homo sapiens -0.03975741692920565 LVQAFQYTDK Unmodified 1211.6186 0.61863837 3838 V9HW63;Q13162;H7C3T4 HEL-S-97n;PRDX4 Peroxiredoxin-4 yes no 0 0 0 3.67 3.09 1 1 1 56.694 56.718 3 2.9311E-05 17120 20230619_1880_Aki_TMTPro18x_K_F1 142.83 108.87 356760 368130 327230 321070 339550 438860 410650 382420 528810 452860 449340 462090 514370 434930 426600 596550 587070 584670 330200 336490 335150 329990 354380 433680 413390 396410 528710 454480 467610 468010 518960 458100 445130 595650 560130 555460 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1335500000 17896 3838 16971 33941;33942;33943 27188;27189 27188 2 9606 Homo sapiens 0.021293798148690257 LVQAPLDADGDNVLQEK Unmodified 1823.9265 0.92650729 1675 H7BYN4;A0A7I2V5Y5;Q02241-2;Q02241;A0A2U3TZL8;Q02241-3 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 0 0 0 4 0.816 1 1 1 59.472 59.501 3 1.8074E-08 18130 20230619_1883_Aki_TMTPro18x_K_F4 121.27 96.331 27783 28615 38199 34405 31705 36118 36079 33368 41276 37090 40162 31003 50995 36191 34742 39148 38131 39787 25811 26227 37818 34306 33546 36333 36298 34387 41707 37124 41653 31966 50875 37363 35824 39319 36462 37777 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47891000 17897 1675 16972 33944;33945;33946 27190 27190 1 9606 Homo sapiens 0.047501097646090784 LVQDVANNTNEEAGDGTTTATVLAR Unmodified 2559.2413 0.2412525 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;A0A7I2YQK6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;Q53SE2;E7ESH4;E7EXB4;A0A0S2Z415;P10809-2;C9JL25 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 3 0.816 1 1 1 54.46 54.495 3 1.0539E-88 16109 20230619_1882_Aki_TMTPro18x_K_F3 323.63 307.51 351430 283870 320240 376580 334670 387200 410490 415660 425280 443800 412590 435090 434110 375770 430340 490700 434730 476340 324690 260650 328540 372760 348660 391280 409940 423400 432120 446620 425120 440080 442240 395630 438260 490280 416190 452430 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 9216400000 17898 272 16973 33947;33948;33949 27191;27192;27193;27194 27193 4 9606 Homo sapiens 0.024001525949188363 LVQEQGSHSK Unmodified 1111.5622 0.56218613 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 0 5 0 1 33.69 33.775 3 0.0010719 7102 20230619_1885_Aki_TMTPro18x_K_F5 81.92 55.322 13632 6454.3 16071 15581 21209 22616 17055 21136 21054 17514 23050 25295 19456 17377 25384 10500 20973 19455 12591 5994.7 16195 15061 21506 22282 17576 21582 21287 18129 23425 25027 20249 17826 25380 11216 20099 18389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8950600 17899 3549 16974 33950 27195 27195 1 9606 Homo sapiens 0.010867519782550517 LVQGSILK Unmodified 856.5382 0.53820321 3437 Q6FHF5;P12004;Q6FI35;B4DUA2;Q7Z6A3;Q7Z6A2;Q7Z6A1 PCNA Proliferating cell nuclear antigen yes no 0 0 0 2.5 0.5 1 1 52.363 52.415 3 0.0024067 15218 20230619_1882_Aki_TMTPro18x_K_F3 104.44 17.256 67101 42909 56768 66960 60981 134820 70309 68558 134190 81448 73901 98329 115200 98962 76755 148370 126700 175500 61883 39514 58741 66411 63961 129430 72241 74934 130570 82364 80573 99133 114540 104710 81895 149550 121080 166220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105150000 17900 3437 16975 33951;33952 27196 27196 1 9606 Homo sapiens 0.10419563282505351 LVQIASR Unmodified 785.47594 0.4759373 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 3 0 1 43.734 43.803 2 0.035385 11280 20230619_1882_Aki_TMTPro18x_K_F3 92.822 11.525 208420 178580 188120 211490 267010 271740 270460 270370 355540 150770 156100 138740 140410 136050 206030 178310 192970 132640 192620 163750 194130 211680 271190 270210 274870 273050 348770 158820 168880 141560 147150 142520 207450 176070 184340 126690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140840000 17901 3957 16976 33953 27197 27197 1 9606 Homo sapiens 0.0746183693418061 LVQIHVDTMK Oxidation (M) 1198.638 0.63799361 4733 Q9Y3Z3;Q9Y3Z3-4;Q9Y3Z3-3;A0A2R8YCS7;A0A2R8YD90;A0A2R8Y7R5;A0A2R8Y755;A0A2R8Y586;A0A2R8YG48;A0A804HL67;A0A2R8YF51;A0A2R8Y5D2;Q59H15 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes no 0 1 0 8 0 1 47.107 47.155 3 0.028099 12340 20230619_1888_Aki_TMTPro18x_K_F8 51.567 25.628 66533 58996 67425 68909 65776 79325 68714 73888 81634 81022 88549 90520 86793 78172 89932 96071 94589 103910 61560 54082 68406 68927 68599 79292 69554 76037 82711 81791 90478 91063 88817 81978 91688 96674 90521 98580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100380000 17902 4733 16977 33954 27198 27198 2887 1 9606 Homo sapiens 0.046620128341373857 LVQIPHFK Unmodified 980.58074 0.58073672 2605 H7C0E5;B4DVT8;H7BZM7;O75312 ZPR1 Zinc finger protein ZPR1 yes no 0 0 0 4 0 1 53.394 53.414 3 0.0020969 15495 20230619_1883_Aki_TMTPro18x_K_F4 107.66 75.73 83372 65397 71438 76504 68355 72447 73755 74101 82840 86228 78912 80173 94513 78923 84198 94549 82962 92070 76981 59978 73534 76316 71405 73634 74358 75923 83788 86311 81847 81628 95460 82293 85792 94598 79452 87442 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108340000 17903 2605 16978 33955 27199 27199 1 9606 Homo sapiens 0.08966958410746884 LVQLGQAEK Unmodified 984.5604 0.56039521 412 H3BNT2;A0A024R6U3;O75208;B4DIV2;H3BPY0 COQ9;hCG_2025883 Ubiquinone biosynthesis protein COQ9, mitochondrial yes no 0 0 0 7.5 0.5 1 1 49.87 49.947 3 0.00055471 13483 20230619_1888_Aki_TMTPro18x_K_F8 110.88 49.103 98464 79407 92004 98552 108890 128280 127520 118920 154990 103380 112760 97583 121140 97237 111290 120230 122750 108150 90990 72862 94326 98337 112370 127210 128260 121710 154480 105260 117940 99437 122900 101550 114020 119760 117240 102900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76215000 17904 412 16979 33956;33957 27200;27201 27200 2 9606 Homo sapiens 0.06749742960278127 LVQLLVK Unmodified 811.55312 0.55312499 173 A0A0S2Z487;A0A024R1X8;P14923;A0A0S2Z495 JUP Junction plakoglobin yes no 0 0 0 5 0 1 61.768 61.816 2 0.0012376 18699 20230619_1885_Aki_TMTPro18x_K_F5 129.29 6.7881 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17905 173 16980 33958 27202 27202 1 9606 Homo sapiens 0.13981055150509292 LVQNCLWTLR Unmodified 1301.6914 0.69142616 173;209 A0A2R8Y804;B4DSW9;A0A2R8Y543;A0A2R8Y5C3;B4DL06;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y7Z0;B5BU28;A0A024R2Q3;A0A2R8Y5A3;P35222;A0A2R8Y6G0;A0A0S2Z487;A0A024R1X8;P14923;Q7KZ86 CTNNB1;JUP Catenin beta-1;Junction plakoglobin no no 0 0 0 5.5 0.5 1 1 60.113 60.168 2 3.8902E-06 17948 20230619_1885_Aki_TMTPro18x_K_F5 168.83 120.71 73066 76184 78650 68376 79837 97768 80741 87690 100650 67524 49166 45171 60864 43378 64843 73823 65437 60372 67721 69649 79397 70165 82949 96424 81975 89677 99315 68712 53378 46874 61914 46459 65947 72909 62569 57503 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69287000 17906 209;173 16981 33959;33960 27203 27203 1 9606 Homo sapiens 0.05264810336643677 LVQNIIQTAVDQFVR Unmodified 1742.9679 0.9679186 3790 Q02952-3;Q02952-2;Q02952 AKAP12 A-kinase anchor protein 12 yes no 0 0 0 6 0 1 67.89 67.933 3 0.00065649 21518 20230619_1886_Aki_TMTPro18x_K_F6 82.102 70.937 5953.1 4563.9 4347.7 4359.6 8966.6 5318.4 8384.2 6254.8 4692.7 5987.3 6605.2 4457.2 6483.9 4985.8 4154.8 6653.1 8033.4 5270.5 5490.2 4178.8 4616.1 4437.4 8889 5342 8365.8 6320.7 5073.8 6014.9 6666.3 4623.8 6510.3 5215.8 4492.6 6574.2 7629.7 5030.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3408200 17907 3790 16982 33961 27204 27204 1 9606 Homo sapiens 0.1261533531458099 LVQSPNSYFMDVK Oxidation (M) 1542.7388 0.73882986 3581 P42677;H0YMV8;A4D1G5;Q71UM5;C9JLI6 RPS27;RPS27L;LOC392748 40S ribosomal protein S27;40S ribosomal protein S27-like yes no 0 1 0 4.5 3.5 1 1 57.93 57.954 2;3 0.00045064 16992 20230619_1888_Aki_TMTPro18x_K_F8 90.861 75.336 125910 120720 149920 135850 161680 157730 163080 149510 155700 157960 156620 145900 164930 130360 175810 159490 139930 152550 116740 110600 150370 136320 166750 157740 164140 153550 159160 158810 161010 148180 168460 136580 176520 159480 134320 144920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104040000 17908 3581 16983 33962;33963 27205;27206 27206 2253 2 9606 Homo sapiens -0.010829999736870377 LVQSPNSYFMDVK Unmodified 1526.7439 0.74391524 3581 P42677;H0YMV8;A4D1G5;Q71UM5;C9JLI6 RPS27;RPS27L;LOC392748 40S ribosomal protein S27;40S ribosomal protein S27-like yes no 0 0 0 1.5 0.5 1 1 61.081 61.086 3 7.3137E-08 19047 20230619_1881_Aki_TMTPro18x_K_F2 151.74 132.13 216680 228710 265590 243140 213230 277480 287080 255180 274250 274970 229800 191320 272200 205550 275480 231610 220940 233600 201090 209370 264890 244980 227690 277460 284780 262800 278490 274340 239580 198560 276380 213180 276810 232600 212010 221810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 728330000 17909 3581 16983 33964;33965 27207;27208 27208 2 9606 Homo sapiens 0.0016130388894453063 LVQTAAQQVAEDK Unmodified 1399.7307 0.73070802 3995 Q53FT3;E9PJB2;E9PPG8 C11orf73 Protein Hikeshi yes no 0 0 0 5 0 1 53.554 53.624 3 5.4463E-06 15322 20230619_1885_Aki_TMTPro18x_K_F5 124.3 85.503 84872 63697 78100 89131 69809 92159 81456 75961 103600 120360 129190 149360 148800 118140 93899 147670 161060 160180 78386 58539 79856 87915 73652 92544 82166 79960 105390 120130 132260 149180 148630 124500 100450 148450 153440 152010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 780350000 17910 3995 16984 33966 27209 27209 1 9606 Homo sapiens 0.046831891012288906 LVQTAELTK Unmodified 1001.5757 0.57571092 3685 P60983;G3V4P8;M0QYG8;M0R1D2;M0R0C1;M0QYJ8;Q8TDZ6;O60234 GMFB;GMFG Glia maturation factor beta;Glia maturation factor gamma yes no 0 0 0 7 0.816 1 1 1 50.68 50.758 2 0.00032443 13922 20230619_1887_Aki_TMTPro18x_K_F7 152.97 90.256 259050 212770 226310 254000 313220 284250 297390 288280 336670 293700 282540 262550 288870 222500 255490 349120 326560 274400 239290 195140 234030 253550 317660 285420 301870 294350 338620 295640 292560 266840 293000 237550 264810 344320 311400 261610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 552090000 17911 3685 16985 33967;33968;33969 27210;27211 27210 2 9606 Homo sapiens 0.07498609757465147 LVQTPLTDR Unmodified 1041.5819 0.58185893 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 6.5 0.5 1 1 47.631 47.719 2 0.00073765 12506 20230619_1887_Aki_TMTPro18x_K_F7 125.16 79.443 205480 151670 188750 220440 178910 196870 208310 214660 218990 230450 244070 268060 270680 180540 239200 304570 265630 288600 189760 139460 193170 216590 187420 201210 208750 218560 223570 233050 250570 267520 273590 195850 245620 302930 254060 274200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 444010000 17912 3881 16986 33970;33971 27212;27213 27213 2 9606 Homo sapiens 0.0627312798899311 LVRPPVQVYGIEGR Unmodified 1581.8991 0.89911075 3597 P48047;Q53HH2;A0A494C0K9;H7C0C1;H7C086 ATP5O ATP synthase subunit O, mitochondrial yes no 0 0 1 4 0 1 50.297 50.328 3 6.1819E-09 14077 20230619_1883_Aki_TMTPro18x_K_F4 130.95 106.1 538020 442500 535590 555660 530070 630540 591590 607890 643070 502820 472620 447560 523900 390800 545150 558200 493380 423010 497490 406050 544370 552870 553020 631220 594570 619700 645170 512320 495220 455310 533730 413930 551160 550700 472080 403470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 417730000 17913 3597 16987 33972 27214;27215 27214 2 9606 Homo sapiens 0.13143715805540523 LVSDGNINSDR Unmodified 1188.5735 0.57347909 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 2.5 1.12 1 1 1 1 40.534 40.577 2 2.1374E-12 9850 20230619_1882_Aki_TMTPro18x_K_F3 243.53 215.36 356590 238410 314060 343590 354900 419170 390440 374850 528380 434170 470120 511390 495810 417090 408420 526190 625760 629490 329030 219290 323430 339180 366920 416930 395720 387630 527860 438200 486360 512420 501330 439280 429480 532380 596650 596790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 448960000 17914 2337;3778;3779 16988 33973;33974;33975;33976 27216;27217 27217 2 9606 Homo sapiens -0.013264707182997881 LVSDIIDPVALEIPLSK Unmodified 1821.0499 0.049916891 4071 Q5UIP0-2;Q5UIP0;H7C2B5 RIF1 Telomere-associated protein RIF1 yes no 0 0 0 7.5 0.5 1 1 66.005 66.027 3 0.0025255 20373 20230619_1888_Aki_TMTPro18x_K_F8 70.41 56.153 8301.4 6548.2 7005.7 6307.9 7087.6 7792.5 8432.6 7721.5 8015.2 7987.2 7260.7 7948.6 9285.2 7406.1 9349.5 8741.1 9457.9 9065.4 7664.4 5995.4 7222 6416.8 7391.7 7769.6 8410.4 7900.3 8164.1 8056.6 7582.6 8051.2 9412.5 7731.5 9508 8783.1 9045.5 8608.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69732000 17915 4071 16989 33977;33978 27218 27218 1 9606 Homo sapiens 0.1722339288303374 LVSDTIGQR Unmodified 987.53491 0.53490874 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;A0A804HL78;O94854 MACF1;KIAA0754 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5;Uncharacterized protein KIAA0754 yes no 0 0 0 6 0 1 43.955 44.047 2 0.0055508 11250 20230619_1886_Aki_TMTPro18x_K_F6 103.42 77.151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17916 1566 16990 33979 27219 27219 1 9606 Homo sapiens 0.04064268437866758 LVSEYMSK Unmodified 955.46847 0.46846866 3436 Q6IRT1;Q6FI45;P11766;Q5U043;Q2VIM7 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 yes no 0 0 0 7.5 0.5 1 1 53.342 53.413 2 0.0017044 15124 20230619_1887_Aki_TMTPro18x_K_F7 150.4 85.596 235510 176550 227750 218530 245710 322690 243100 233890 361810 285890 286640 325940 297980 267400 316270 289230 352670 326300 217600 162040 232270 218560 254390 316220 248870 246440 358700 287640 298440 326850 304810 278880 323120 292490 336900 309620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 615130000 17917 3436 16991 33980;33981 27220;27221 27220 2 9606 Homo sapiens -0.01104683448409105 LVSFPIGIYK Unmodified 1135.6641 0.664132 46 A0A024QZR0;X6RK58;A0A024QZM2;Q8TCA0-3;Q8TCA0 LRRC20 Leucine-rich repeat-containing protein 20 yes no 0 0 0 6 0 1 63.379 63.427 3 0.015656 19653 20230619_1886_Aki_TMTPro18x_K_F6 68.657 46.509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17918 46 16992 33982 27222 27222 1 9606 Homo sapiens 0.10172650067943323 LVSIDSK Unmodified 760.43307 0.43306943 3484;3299;3886 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98;Q14315;Q14315-2;O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;A0A804HJC2 FLNA;FLNC;FLNB Filamin-A;Filamin-C;Filamin-B no no 0 0 0 7 0.816 1 1 1 49.235 49.313 2 0.0054214 13232 20230619_1887_Aki_TMTPro18x_K_F7 140.98 63.236 729440 518360 623650 685280 956280 931580 856450 858530 1028600 862700 991490 976870 959230 829890 1004200 708040 1102800 925510 673130 476190 647600 681400 963790 921810 874380 881990 1036300 875470 1017700 981060 982310 854700 1024000 726780 1053000 877400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 790200000 17919 3484;3886;3299 16993 33983;33984;33985 27223 27223 1 9606 Homo sapiens 0.04327022086101806 LVSIGAEEIVDGNVK Unmodified 1541.8301 0.83008771 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;G3V2N5;A0A804HJQ9;G3V2W4;B4DRP5;A0A494C1A0;P35609;P35609-2;A0A804HI95;A0A804HJN7;B7Z2N5;G3V2X9;B7Z4V1;G3V5M4;A0A804HKG0;A0A494C033;A0A804HIY0;A0A494C166;G3V2E8;A0A494C0Q3;A0A494C031 ACTN1;ACTN2 Alpha-actinin-1;Alpha-actinin-2 yes no 0 0 0 4.5 0.5 1 1 61.655 61.681 3 2.9692000000000004E-25 18646 20230619_1885_Aki_TMTPro18x_K_F5 184.98 168.09 162510 121800 128010 121230 126940 151180 151550 164400 158230 149890 160510 125480 166650 139550 154020 198920 152490 175680 149920 111570 132870 123010 132760 150930 151640 166540 160880 151530 164620 129270 169270 146640 157020 197490 146080 167030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 399930000 17920 387 16994 33986;33987 27224 27224 1 9606 Homo sapiens 0.08084586995300924 LVSIPDEIFCEEIAK Unmodified 1761.8859 0.88588803 4339 Q96E29-3;Q96E29-2;Q96E29;E5RIY4 MTERF3 Transcription termination factor 3, mitochondrial yes no 0 0 0 5 0 1 64.414 64.458 3 2.1589E-05 19936 20230619_1885_Aki_TMTPro18x_K_F5 103.85 92.591 24675 20492 22558 20347 23226 26528 28733 25221 30031 38105 35760 34505 38931 34803 37772 45394 34300 44346 22802 18763 23094 20661 24228 26338 28686 26196 30790 37704 36558 35216 39581 36448 38286 45364 32921 42095 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34058000 17921 4339 16995 33988 27225 27225 1 9606 Homo sapiens 0.03542052120633343 LVSLGTCFGK Unmodified 1080.5638 0.56376603 4698 Q9Y221;J3QLW7;B3KM49;Q9Y221-2 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog yes no 0 0 0 4 0 1 59.438 59.44 2 0.0039507 18127 20230619_1883_Aki_TMTPro18x_K_F4 92.732 59.181 43793 40024 44934 48051 44636 51782 49579 47416 55644 50440 50396 47293 49822 49003 46174 56808 48504 54205 40533 36696 45569 47917 46538 51978 49892 48833 56127 50743 51909 48237 50742 50876 47209 56788 46425 51491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96224000 17922 4698 16996 33989 27226 27226 1 9606 Homo sapiens 0.026706697426334358 LVSLIGSK Unmodified 815.51165 0.5116541 2961 F5GX11;V9HW55;P25786;P25786-2 PSMA1;HEL-S-275 Proteasome subunit alpha type-1 yes no 0 0 0 4 0 1 58.68 58.682 2 0.0014143 17778 20230619_1883_Aki_TMTPro18x_K_F4 143.01 35.416 207360 175060 199520 204130 201120 271820 225090 211440 689360 201310 176180 188600 226860 170930 201710 224360 206320 191850 191720 160500 203450 204630 210850 268230 239280 219920 653890 204890 206990 191460 228860 179800 205920 222740 197260 182610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80218000 17923 2961 16997 33990 27227 27227 1 9606 Homo sapiens 0.09651874391192905 LVSLPEEIGHLR Unmodified 1361.7667 0.76669959 2468 B4DEQ7;Q96II8-3;Q96II8-4;Q96II8;Q96II8-2 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 yes no 0 0 0 7 0 1 56.255 56.313 3 9.0937E-10 16309 20230619_1887_Aki_TMTPro18x_K_F7 145.09 118.97 44744 46034 56063 54755 48947 50790 47185 56821 53078 63151 62096 63252 65433 45779 85178 72174 59914 81388 41527 42188 55880 54554 51306 51819 47932 57780 54163 63435 63492 63629 67514 49261 84811 72646 57718 77126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219690000 17924 2468 16998 33991 27228 27228 1 9606 Homo sapiens 0.10028691068737317 LVSQIEDAMR Unmodified 1160.586 0.58595803 4393 Q96RN5;Q96RN5-2;Q96RN5-3;B4DN68;F8WDM6;F2Z2B7 MED15 Mediator of RNA polymerase II transcription subunit 15 yes no 0 0 0 5 0 1 60.224 60.276 2 0.0024663 18019 20230619_1885_Aki_TMTPro18x_K_F5 96.171 75.546 41241 29231 39671 45321 43088 54106 47898 44740 52132 45188 43460 42922 44373 42756 45785 50804 45020 48948 38090 26903 40527 44526 44668 53791 48135 46376 52516 45605 45049 43687 45364 44514 46521 50809 43109 46496 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81827000 17925 4393 16999 33992 27229 27229 1 9606 Homo sapiens 0.01208849420390834 LVSSDPEINTK Unmodified 1201.619 0.6190323 4703 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 4 0.816 2 2 2 48.1 48.165 2;3 5.7317E-10 13092 20230619_1883_Aki_TMTPro18x_K_F4 192.12 133.42 345520 228070 266430 303000 312670 369460 315200 303670 365810 375950 416880 361360 403490 329220 331290 424720 421340 339660 318510 209600 278160 300570 321650 366950 319240 316710 371890 375700 424240 366710 408750 345650 343610 420280 401700 323810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1509099999.9999998 17926 4703 17000 33993;33994;33995;33996;33997;33998 27230;27231 27230 2 9606 Homo sapiens 0.02628754744091566 LVSSPCCIVTSTYGWTANMER Oxidation (M) 2447.092 0.091951189 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 1 0 2.33 0.471 2 1 60.728 60.745 3 5.9667E-12 18503 20230619_1881_Aki_TMTPro18x_K_F2 137.05 129.06 125600 97859 109950 128450 111180 131750 126820 127240 153830 142960 130100 156080 163170 139020 134310 187620 166060 184320 115990 89858 113130 127220 115950 132840 127790 130740 154290 144070 136220 157260 164160 146520 139140 187400 158700 175030 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1140700000 17927 751 17001 33999;34000;34001 27232;27233;27234;27235 27232 452 4 9606 Homo sapiens -0.07371110824669813 LVSSPCCIVTSTYGWTANMER Unmodified 2431.097 0.097036567 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 0 3 0.816 1 1 1 62.579 62.593 3 1.0515000000000001E-30 19470 20230619_1882_Aki_TMTPro18x_K_F3 215.51 207.52 102340 90051 104800 98853 73981 95945 99739 92958 94769 116470 99713 98120 121990 106020 93099 138540 126310 125330 94696 82506 105770 99132 80047 97180 98974 95829 97164 115870 103030 100760 122480 110820 97261 137820 120520 119180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 906080000 17928 751 17001 34002;34003;34004 27236;27237 27237 2 9606 Homo sapiens -0.061268069620837196 LVSVLQNK Unmodified 899.54402 0.54401687 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 3.5 0.5 1 1 55.027 55.054 2 0.00013544 16361 20230619_1882_Aki_TMTPro18x_K_F3 190.08 53.971 361820 294400 311960 322240 307630 345600 357950 345500 416630 313610 360930 373010 333810 291030 435310 378320 380820 339060 334170 269800 321050 323610 321470 347780 359780 352220 418460 320600 372070 373310 346410 307360 437530 376800 364600 322610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 197230000 17929 1637 17002 34005;34006 27238;27239 27238 2 9606 Homo sapiens 0.09022661794188025 LVSWYTLMEGQEPIAR Unmodified 1891.9502 0.95021962 4739 Q9Y4E8-2;Q9Y4E8-3;Q9Y4E8;H0YI31;Q9Y4E8-4;B4DN46;F8VZG8;B7Z3J0;F8W0H4;Q2NL66 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes no 0 0 0 1 0 1 64.38 64.38 3 0.013586 20289 20230619_1880_Aki_TMTPro18x_K_F1 60.209 48.93 6591 5695.8 8631.6 8192.9 7179.8 6557.1 10201 8646.9 6962.6 14906 13509 15391 15625 11505 11058 15305 15106 13843 6112.2 5233.4 8574.5 8049.7 7625.8 6806.3 10014 8861.2 7571.5 14722 13654 15458 15651 12202 11571 15225 14406 13169 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8808500 17930 4739 17003 34007 27240 27240 1 9606 Homo sapiens 0.039922519974425086 LVTCTGYHQVR Unmodified 1332.6609 0.66085431 2945 E9PS41;Q6RFH5;Q6RFH5-2 WDR74 WD repeat-containing protein 74 yes no 0 0 0 2 0 1 37.002 37.062 3 4.3352E-09 8543 20230619_1881_Aki_TMTPro18x_K_F2 187.22 125.45 30083 24959 33327 33408 31577 45286 35142 35556 29083 31579 41019 46008 42155 39445 37562 31261 58759 52052 27844 22917 33573 33188 33086 44631 35066 36894 30447 32562 41612 45801 42811 40480 39403 32732 55969 49244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59762000 17931 2945 17004 34008 27241 27241 1 9606 Homo sapiens 0.007830319516187956 LVTDLTK Unmodified 788.46437 0.46436956 2776 CON__P02769;B4DPR2;P02768;B4DPP6;H0YA55;CON__P02768-1;F6KPG5;A0A0C4DGB6;A8K9P0;B2RBS8;Q56G89;P02768-2;C9JKR2;D6RHD5;B7WNR0 ALB Serum albumin yes no 0 0 0 7 0.816 1 1 1 52.21 52.286 2 0.011157 14490 20230619_1888_Aki_TMTPro18x_K_F8 117.02 25.954 + 253400 557430 630130 216120 2012100 2089400 968330 917970 1834800 520090 558900 732730 361970 430120 542460 483570 767440 936240 239660 506700 626950 271350 1952500 1944600 1061600 1006200 1766200 557320 625990 723370 386180 456530 560570 510400 733270 883830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3443399999.9999995 17932 2776 17005 34009;34010;34011 27242;27243 27243 2 9606 Homo sapiens 0.06167595120189162 LVTEIQK Unmodified 829.49092 0.49091866 1766 B4DKX3;A0A8I5KSH6;Q13206;A0A8I5KQZ1;A0A3B3ISR7;Q86VR6;E9PIF2;Q59EC7;A0A8I5KXY1;A0A8I5KPM1;A0A8I5KUU7 DDX10 Probable ATP-dependent RNA helicase DDX10 yes no 0 0 0 7 0 1 49.413 49.498 3 0.016413 13349 20230619_1887_Aki_TMTPro18x_K_F7 83.377 11.662 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17933 1766 17006 34012 27244 27244 1 9606 Homo sapiens 0.06935284011512977 LVTEVDGK Unmodified 859.4651 0.46509784 4822 yes yes 0 0 0 4 0.816 2 2 2 49.452 49.515 2 0.0064208 13580 20230619_1885_Aki_TMTPro18x_K_F5 110.61 18.705 + 4880000 3465200 4316200 4859800 5430900 5872700 5256200 5070100 7077200 6263500 6759000 6597500 6997500 5820800 5421700 5592000 7922800 6674500 4504400 3185400 4451400 4804100 5551900 5842400 5364600 5267200 7092600 6279600 6956300 6653400 7060700 6020400 5678900 5684200 7547600 6332600 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 7382899999.999999 17934 4822 17007 34013;34014;34015;34016;34017;34018 27245;27246;27247 27247 3 9606 Homo sapiens 0.029743897692469545 LVTLEEFLASTQR Unmodified 1505.809 0.80895834 2110 Q53GX6;A8K7Q1;Q02818;B4DZX0;Q96BA4;H7BZI1 NUCB1 Nucleobindin-1 yes no 0 0 0 1 0 1 65.509 65.509 3 2.8772E-06 20734 20230619_1880_Aki_TMTPro18x_K_F1 134.56 104.01 5278.7 5671 4345.6 4026.1 4856.9 3983.3 5194.6 6813 4877.3 4226.5 6015.4 4225.9 4872.7 4075.2 5202.5 4957.9 2747.2 6370.6 4883.5 5176.2 4496.1 4212.9 5003 4105.6 5213.8 6688.4 5026.1 4405.8 6057.3 4296.6 5019.9 4258.8 5149.6 5047 2677.3 6022.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8556300 17935 2110 17008 34019 27248 27248 1 9606 Homo sapiens 0.0762862168646734 LVTMQIWDTAGQER Oxidation (M) 1662.8036 0.80355538 1257 A0A158RFU6;P51149;A0A6Q8PG52;A0A6Q8PH84;C9J8S3;A0A6Q8PGE6;B4DPH9;C9J592;C9IZZ0 RAB7A Ras-related protein Rab-7a yes no 0 1 0 6 0 2 56.261 56.335 2;3 7.1863E-07 16582 20230619_1886_Aki_TMTPro18x_K_F6 140.45 127.88 193970 158980 119720 132990 193270 144550 148650 205410 228650 298770 368160 386690 251620 219780 333200 297820 241050 325800 178800 145390 128870 136830 193550 147040 155140 207900 234080 299250 366250 382710 264210 236260 332170 299720 232120 308840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 734670000 17936 1257 17009 34020;34021 27249;27250 27249 800 2 9606 Homo sapiens -0.0013342516765533219 LVTMQIWDTAGQER Unmodified 1646.8086 0.80864076 1257 A0A158RFU6;P51149;A0A6Q8PG52;A0A6Q8PH84;C9J8S3;A0A6Q8PGE6;B4DPH9;C9J592;C9IZZ0 RAB7A Ras-related protein Rab-7a yes no 0 0 0 7.67 0.471 1 2 61.789 61.821 2;3 4.7254E-09 18545 20230619_1888_Aki_TMTPro18x_K_F8 162.67 145.3 179790 154490 185730 194650 132160 180840 163570 162720 193400 209170 201590 202100 220160 192010 214070 244200 202320 233910 166340 141740 187440 193090 142660 183430 164160 168810 195770 208710 207290 205200 223830 201140 217320 243900 193910 222160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 625930000 17937 1257 17009 34022;34023;34024 27251;27252 27252 2 9606 Homo sapiens 0.011108786949534988 LVTPEDDELDELRPGQR Unmodified 1980.9752 0.9752484 2546 B4DMP4;Q08AM6 VAC14 Protein VAC14 homolog yes no 0 0 1 1.5 0.5 1 1 52.142 52.162 3 3.0269E-18 15413 20230619_1881_Aki_TMTPro18x_K_F2 176.42 163 59839 48340 53140 63649 52672 56008 63163 61776 66942 69808 68631 76969 80023 72956 62259 74861 78181 86897 55275 44383 54596 62910 55022 57352 63199 62952 68086 70329 70880 77640 80510 75486 64571 75839 74710 82375 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116940000 17938 2546 17010 34025;34026 27253 27253 1 9606 Homo sapiens 0.023999783336876135 LVTSGAESGNLNTSPSSNQTR Unmodified 2119.0142 0.014153099 667 Q05CT8;A8K1Z3;A0A024RBE5;Q8NHV4-2;Q8NHV4;Q8NHV4-3 NEDD1 Protein NEDD1 yes no 0 0 0 6 0 1 42.634 42.728 3 3.4566E-37 10652 20230619_1886_Aki_TMTPro18x_K_F6 233.49 218.4 10570 4956.2 10526 9751.4 12437 11607 11772 11780 11309 11471 14331 13690 13125 12453 13150 12183 14881 13982 9747.3 4587.1 10718 9473.5 12728 11597 11899 12013 11666 11675 14506 13758 13443 12867 13461 12353 14215 13264 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29719000 17939 667 17011 34027 27254 27254 1 9606 Homo sapiens -0.0005934110254202096 LVTSPCCIVTSTYGWTANMER Oxidation (M) 2461.1076 0.10760125 3177 K9JA46;P07900;P07900-2;Q8TBA7;O75322;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 1 0 2.5 0.5 1 1 61.794 61.813 3 4.409E-08 19151 20230619_1882_Aki_TMTPro18x_K_F3 104.18 95.792 270900 229600 290190 263490 221420 245750 265660 257240 285290 328160 315520 274540 342460 305110 268650 357600 338130 350130 250690 210480 291960 263260 236560 250210 266090 263930 290980 326200 323130 282370 345290 316500 278810 357830 322940 332590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1654799999.9999998 17940 3177 17012 34028;34029 27255;27256;27257 27256 1843 3 9606 Homo sapiens -0.06450824307603398 LVTSPCCIVTSTYGWTANMER Unmodified 2445.1127 0.11268663 3177 K9JA46;P07900;P07900-2;Q8TBA7;O75322;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 3.33 0.471 2 1 62.958 62.98 3 4.635E-37 19606 20230619_1882_Aki_TMTPro18x_K_F3 230.27 217.6 113560 90619 113150 128150 108910 127530 124020 119840 131360 142220 109010 121340 148970 133630 106560 161000 154940 163130 104990 83270 115010 126270 113910 128790 124400 123590 132700 141910 114700 124520 148870 138890 112070 161300 147830 154890 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 873740000 17941 3177 17012 34030;34031;34032 27258;27259;27260 27258 3 9606 Homo sapiens -0.05206520445017304 LVTTVTEIAG Unmodified 1002.5597 0.55972651 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;B4DNY3;B4DNA3;B4DUZ8 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 0 0 5 0.816 1 1 1 62.774 62.808 2 0.0013813 19212 20230619_1885_Aki_TMTPro18x_K_F5 108.09 94.092 117960 86706 94011 117780 93153 126450 115690 115650 146900 147970 131700 130620 140730 124020 134010 145820 164790 164050 108830 79665 97658 116440 97729 126880 116280 119750 147340 147310 136240 133140 143100 129340 138150 147170 157370 155630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1503899999.9999998 17942 2327 17013 34033;34034;34035 27261;27262 27262 2 9606 Homo sapiens 0.05854903520571497 LVTVYCEHGHK Unmodified 1341.65 0.64995528 4364 Q96HY7;C9JWN1 DHTKD1 Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial yes no 0 0 0 8 0 1 39.729 39.718 4 4.0676E-05 9354 20230619_1888_Aki_TMTPro18x_K_F8 138.22 107.35 155320 140910 174710 158140 174040 192410 188100 171570 193020 183400 234190 233200 194060 192350 207580 237340 260260 226810 143870 129110 175760 158810 181120 191530 189050 177090 197870 186250 236620 233200 200220 201940 213900 237130 248280 215660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150730000 17943 4364 17014 34036 27263 27263 1 9606 Homo sapiens -0.007203704226640184 LVVALSR Unmodified 756.48577 0.48577371 4409 Q9BPX3;Q6NUR1;D6RA93 NCAPG Condensin complex subunit 3 yes no 0 0 0 4 0 1 49.71 49.745 2 0.065018 13864 20230619_1883_Aki_TMTPro18x_K_F4 73.975 20.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17944 4409 17015 34037 27264 27264 1 9606 Homo sapiens 0.09779024939552983 LVVDSHVQYR Unmodified 1214.6408 0.6407708 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 7 0.816 1 1 1 40.902 40.953 3 1.0928E-14 9618 20230619_1887_Aki_TMTPro18x_K_F7 238.51 151.84 84150 65887 75169 86681 92023 96606 94515 102040 117290 89581 92188 94898 101070 96067 93679 103330 121740 112740 77721 60500 77428 85949 94332 97054 95844 103510 117140 91420 96179 96166 102640 99413 96983 104230 116140 107020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334760000 17945 1863 17016 34038;34039;34040 27265 27265 1 9606 Homo sapiens 0.042036042833160536 LVVECVMNNVTCTR Oxidation (M) 1709.7899 0.78989593 2888 E7DVW5;Q01469;I6L8B7 FABP5 Fatty acid-binding protein, epidermal yes no 0 1 0 5.33 3.09 1 1 1 47.849 47.899 3 8.9808E-08 13496 20230619_1888_Aki_TMTPro18x_K_F8 143.56 131.87 132880 97913 129800 151740 139090 153280 155490 144190 172430 150610 164650 155280 163810 126520 159590 167280 162550 147940 122770 90101 132390 148740 144180 154610 156320 148170 174320 152050 169220 156530 166930 133640 162560 166360 155400 140770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 355500000 17946 2888 17017 34041;34042;34043 27266;27267;27268 27268 1714 3 9606 Homo sapiens -0.03660742262763961 LVVECVMNNVTCTR Unmodified 1693.795 0.79498131 2888 E7DVW5;Q01469;I6L8B7 FABP5 Fatty acid-binding protein, epidermal yes no 0 0 0 2 0.816 1 1 1 59.937 59.95 3 7.6108E-29 18575 20230619_1881_Aki_TMTPro18x_K_F2 250.53 219.53 188700 163790 199500 201320 168220 190300 198600 195050 205230 247360 204080 214530 288250 215970 218950 286650 253010 265530 174640 150230 201300 200130 178000 193400 198780 200360 209030 246120 213170 219350 288050 226620 226110 285520 241840 252380 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1468699999.9999998 17947 2888 17017 34044;34045;34046 27269;27270 27269 2 9606 Homo sapiens -0.024164384001551298 LVVFPTDDISLK Unmodified 1345.7493 0.74931819 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;E7EPI4;E7EVM4;E9PHJ4;E7EMY4 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 8 0 1 63.301 63.324 2 0.0026648 19224 20230619_1888_Aki_TMTPro18x_K_F8 91.087 71.325 81557 62333 85688 75732 66707 66760 89999 79375 92368 95882 105840 122570 144500 103310 103550 109680 116250 134360 75414 57195 86352 75321 71328 68513 89487 80717 94536 96804 109730 122500 144160 107660 106750 111480 111230 127290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108570000 17948 2005 17018 34047 27271 27271 1 9606 Homo sapiens 0.09027350743099305 LVVGGLLSPEEDQSLLLSQFR Unmodified 2299.2424 0.24236212 4451 Q9BVI4;F5H303 NOC4L Nucleolar complex protein 4 homolog yes no 0 0 0 8 0 1 65.743 65.762 3 0.031012 20244 20230619_1888_Aki_TMTPro18x_K_F8 54.117 40.981 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17949 4451 17019 34048 27272 27272 1 9606 Homo sapiens 0.1447106349241949 LVVLGSGGVGK Unmodified 984.59678 0.59678072 655;2153 P61224;P61224-3;A0A024RB87;F5H7Y6;E7ESV4;F5GX62;P61224-4;P61224-2;Q9BXV4;F5H004;Q5U0C3;F5H6R7;B7ZAY2;F5GYB5;F5H500;F5H4H0;F5H0B7;F5H491;F5GWU8;F5H077;F5GYH7;F8WBC0;A8KAH9;P62834 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1A no no 0 0 0 3.5 0.5 1 1 54.929 54.958 3 0.00018963 16164 20230619_1883_Aki_TMTPro18x_K_F4 112.13 70.73 77522 60900 66106 71126 74721 87234 84917 86263 90561 90812 88574 87247 102960 86278 82845 102060 89924 89381 71577 55853 68276 71215 77264 86959 85199 88287 91899 91430 91582 88729 103660 89856 85093 101550 85966 85031 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 883380000 17950 655;2153 17020 34049;34050 27273 27273 1 9606 Homo sapiens 0.10386619857013102 LVVPASQCGSLIGK Unmodified 1427.7806 0.7806351 3930;2914 E9PFP8;P57721-4;P57721;J3QT27;Q5MJP6;P57721-2;P57721-3;P57721-5;Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DRD7;B4DLC0;F8W0G4;F8VXH9;F8W1G6;H3BND9 PCBP3;PCBP2 Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 no no 0 0 0 3.5 0.5 1 1 56.988 57.009 3 8.911E-06 17239 20230619_1882_Aki_TMTPro18x_K_F3 117.93 102.9 298390 254540 261180 301780 246260 332530 313170 314790 358940 366480 319520 290830 403840 316190 296110 377180 334550 318560 275700 233410 268530 301280 259380 333400 313280 324140 361750 365380 333080 299660 404200 328670 305560 374570 319620 303250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2504900000 17951 2914;3930 17021 34051;34052 27274;27275 27275 2 9606 Homo sapiens 0.08385600505516777 LVVPATQCGSLIGK Unmodified 1441.7963 0.79628516 3929 Q15365;Q53SS8 PCBP1 Poly(rC)-binding protein 1 yes no 0 0 0 3.5 0.5 2 2 57.687 57.705 2;3 4.2968E-16 17361 20230619_1883_Aki_TMTPro18x_K_F4 208.74 69.753 275990 216110 244920 261880 225440 280530 272290 253350 283340 311890 277870 269680 332170 267790 257310 354070 310930 317010 254900 198280 251230 260960 237260 281590 272190 262320 288080 310790 287630 275730 333680 280930 266460 352050 297010 301470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3112399999.9999995 17952 3929 17022 34053;34054;34055;34056 27276;27277 27277 2 9606 Homo sapiens 0.09305887022583192 LVVSTQTALA Unmodified 1001.5757 0.57571092 2776 CON__P02769 yes yes 0 0 0 7.5 0.5 1 1 58.001 58.051 2 0.0012007 17007 20230619_1887_Aki_TMTPro18x_K_F7 114.6 99.827 + 37917 56487 55833 43800 120720 136320 85862 68484 115670 46534 43369 42480 35820 40661 51221 54249 47784 51754 35377 51544 56150 46495 119350 129290 89366 74026 113100 48311 47593 43292 37642 42676 51645 54147 45780 49168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223800000 17953 2776 17023 34057;34058 27278 27278 1 9606 Homo sapiens 0.0749860975744241 LVVTNLDK Unmodified 900.52803 0.52803245 4706 Q9Y2A7;Q9Y2A7-2;A0A994J4I5;A0A994J6K9;B3KMK7 NCKAP1 Nck-associated protein 1 yes no 0 0 0 7.5 0.5 1 1 52.323 52.399 2 0.00069982 14562 20230619_1888_Aki_TMTPro18x_K_F8 158.07 42.581 238110 185610 200440 207320 197850 234970 239510 216100 262830 238310 241920 242150 254610 205430 217150 267620 276610 251480 219820 170160 206780 208010 207060 235090 239740 222740 265550 239840 249730 244450 257670 216430 225020 266880 263910 239120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148360000 17954 4706 17024 34059;34060 27279;27280 27280 2 9606 Homo sapiens 0.07378955557283007 LVVVGDGACGK Unmodified 1073.5539 0.55392963 3723 P62745 RHOB Rho-related GTP-binding protein RhoB yes yes 0 0 0 7 0 1 49.807 49.891 2 0.0052959 13529 20230619_1887_Aki_TMTPro18x_K_F7 106.2 64.323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17955 3723 17025 34061 27281 27281 1 9606 Homo sapiens 0.020094817372637408 LVVVISNIESGEVLER Unmodified 1754.9778 0.97781458 3845 Q13257;A0A0S2Z414 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes no 0 0 0 5 0 1 64.493 64.538 3 2.009E-14 19967 20230619_1885_Aki_TMTPro18x_K_F5 173.36 162.41 11575 11009 15154 12622 12019 12833 13563 14998 16174 14639 16975 16122 19293 15631 17174 13863 16112 17443 10741 10088 15032 12630 12763 13015 13680 15159 16356 14860 17474 16283 19506 16057 17423 14173 15435 16524 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50246000 17956 3845 17026 34062 27282 27282 1 9606 Homo sapiens 0.13052478529311884 LVVVLCNLKPQK Unmodified 1409.8428 0.84284142 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 1 7.5 0.5 1 1 60.614 60.651 3 0.00092517 18129 20230619_1887_Aki_TMTPro18x_K_F7 91.855 73.543 111810 85755 105810 109830 83686 108370 108360 112230 125760 91337 88873 82497 80847 68308 120350 83313 86474 66350 103300 78728 107700 108930 89497 109730 108390 113840 125540 93202 92617 83695 84626 71704 119600 82670 82926 63273 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109550000 17957 1102 17027 34063;34064 27283;27284 27283 2 9606 Homo sapiens 0.15431371644490355 LVWIPSER Unmodified 998.55492 0.5549159 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4;G1UI33;A0A8I5KSC2;A0A8I5KTT7;Q9UE82 MYH10 Myosin-10 yes no 0 0 0 1 0 1 57.458 57.458 2 0.081669 17486 20230619_1880_Aki_TMTPro18x_K_F1 77.046 35.598 83661 83631 88531 83010 83529 93927 84987 86594 99410 108020 103100 109160 115770 95241 93149 139040 126150 143570 77503 76527 89412 84096 87215 94037 86102 89534 100690 108050 106180 110330 116700 101050 97201 139110 120500 136250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62138000 17958 3549 17028 34065 27285 27285 1 9606 Homo sapiens 0.05558064168474175 LVWPSAK Unmodified 799.45922 0.4592246 4399 Q96T76;Q96T76-8;Q96T76-9;H7C1W5 MMS19 MMS19 nucleotide excision repair protein homolog yes no 0 0 0 3 0 1 55.242 55.283 2 0.039453 16484 20230619_1882_Aki_TMTPro18x_K_F3 90.986 9.2017 103920 78198 82377 82932 85424 134770 103540 101360 143900 101920 109800 139920 168770 140050 100050 187860 208230 233470 95876 71667 85581 84053 89427 131490 104540 105860 142850 104290 116960 140410 167250 147060 109400 190250 198360 221170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69646000 17959 4399 17029 34066 27286 27286 1 9606 Homo sapiens 0.051473360482305 LVWVPSDK Unmodified 942.51747 0.51746776 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5;B4E3S1;A0A8I5KYI1;Q5BKV1;A0A8I5KU92;B1AH99 MYH9 Myosin-9 yes no 0 0 0 1 0 1 57.816 57.816 2 0.0066752 17612 20230619_1880_Aki_TMTPro18x_K_F1 109.86 61.579 110960 98126 107180 107850 99968 123250 148590 133730 152860 166200 157160 161260 197930 159200 143020 215560 183880 231540 102630 89905 109140 108380 105780 123700 147080 136760 155750 166060 162820 163940 198080 167360 149070 216350 175870 219570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187750000 17960 148 17030 34067 27287 27287 1 9606 Homo sapiens 0.043909729028428046 LVYAPLSGVGGVLYDK Unmodified 1649.9029 0.90285872 3897 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 0 0 0 3 0 1 63.439 63.47 3 0.00056777 19890 20230619_1882_Aki_TMTPro18x_K_F3 64.52 53.42 26910 26738 28086 29946 28576 41016 30094 35072 38301 24599 27712 33633 29855 24779 33486 33960 31745 27451 24925 24492 28463 30125 29770 40475 30519 35946 38088 25718 29077 33438 30576 26318 33892 33619 30360 26158 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138950000 17961 3897 17031 34068 27288 27288 1 9606 Homo sapiens 0.10390340788762842 LVYILNR Unmodified 889.53854 0.53853756 3931 Q15393;A8K6V3;Q15393-2 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 5.5 0.5 1 1 56.366 56.427 2 0.014103 16387 20230619_1885_Aki_TMTPro18x_K_F5 113.07 41.077 224490 199420 194530 219280 228160 282440 240510 250960 277230 110260 97245 74873 93824 72641 184430 106840 110820 84034 207460 182710 200810 220660 235020 280010 242800 254740 272670 118210 108160 77770 100160 76850 181450 105790 106560 80156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313430000 17962 3931 17032 34069;34070 27289;27290 27289 2 9606 Homo sapiens 0.089349830023707 LVYLVENPGGYVAYSK Unmodified 1770.9192 0.91923707 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TND0 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 2.5 0.5 1 1 63.039 63.059 3 9.5343E-06 19710 20230619_1882_Aki_TMTPro18x_K_F3 92.575 69.438 227490 192330 229920 234930 207360 249830 197060 196710 228050 256090 253730 248910 259960 213820 227690 285740 261040 293200 210420 176410 233020 233930 217100 250270 200420 206280 231800 255410 259330 251870 263540 225590 234280 286210 249660 278280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 437150000 17963 1817 17033 34071;34072 27291;27292 27292 2 9606 Homo sapiens 0.06461421954850266 LWACNFCYQR Unmodified 1416.6067 0.60671025 2974 F5H365;Q15436;B4DSQ5;G3V4V1;G3V1W4;G3V3G5;G3V2R6 SEC23A Protein transport protein Sec23A yes no 0 0 0 4 0.816 1 1 1 56.667 56.701 2 9.3101E-05 16588 20230619_1885_Aki_TMTPro18x_K_F5 176.41 148.67 53417 57783 53452 47111 61322 102080 68781 67415 104580 29344 32944 30835 33199 27203 36647 32322 30487 38603 49493 52785 54430 49212 63613 98192 69945 70208 101390 31931 37172 31162 34062 28468 36844 32762 29285 36569 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64957000 17964 2974 17034 34073;34074;34075 27293 27293 1 9606 Homo sapiens -0.08492883471603818 LWADHGVQACFGR Unmodified 1515.7041 0.70411611 3385 P04899-4;P04899;Q96C71;P04899-2;B3KX51;P04899-6;P04899-3;P04899-5;B3KP24;Q93020 GNAI2;WUGSC:H_LUCA16.1 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes no 0 0 0 1 0 1 49.73 49.73 3 4.2068E-08 14257 20230619_1880_Aki_TMTPro18x_K_F1 159.5 141.63 33336 28673 33726 35306 31631 45546 40205 38891 46029 36743 33057 40295 44342 33123 42524 46748 46860 41088 30838 26302 34224 35240 33337 45095 40210 40135 46035 37378 35083 40499 44795 35133 43532 46430 44754 39107 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40922000 17965 3385 17035 34076 27294 27294 1 9606 Homo sapiens -0.03310778271111303 LWAHVYAGAPVSSPEYTK Unmodified 1974.984 0.98396259 3688 P61086;B4DIZ2;D6RDM7;P61086-2;B3KSH4 UBE2K;HIP2 Ubiquitin-conjugating enzyme E2 K yes no 0 0 0 2 0 1 55.372 55.393 3 0.0094824 16781 20230619_1881_Aki_TMTPro18x_K_F2 61.37 49.347 104210 101580 102790 111960 89224 108210 111490 99570 113880 130160 121620 144830 144320 141320 126110 177090 168040 200330 96460 93040 104400 112200 94406 109530 111210 103210 116300 130350 125580 146230 145890 147740 131160 178500 160600 189910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 500630000 17966 3688 17036 34077 27295 27295 1 9606 Homo sapiens 0.03546996760837828 LWCAVGVNLSGGK Unmodified 1359.6969 0.69690547 3273 O60271;O60271-4;O60271-2;O60271-3;O60271-5;O60271-9;B4DS36;Q5JB53 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 0 5 0 1 62.041 62.089 3 0.015355 18864 20230619_1885_Aki_TMTPro18x_K_F5 62.258 29.312 50594 39695 47995 47401 45747 42732 54944 39715 57012 43348 51255 46537 47065 42357 62998 45548 53883 53501 46751 36413 48927 47189 47876 43531 54898 40947 57671 43750 52685 46975 48934 44002 63179 46224 51640 50733 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113920000 17967 3273 17037 34078 27296 27296 1 9606 Homo sapiens 0.031444891284536425 LWCNSHRPELVRPALER Unmodified 2132.1062 0.10616019 3794;3964 Q04828;H0Y804;A6NHU4;B4E0M1;Q2XPP3 AKR1C1 Aldo-keto reductase family 1 member C1 no no 0 0 2 4 0 1 42.761 42.804 5 9.9233E-14 10780 20230619_1883_Aki_TMTPro18x_K_F4 165.45 138.65 55170 19333 34792 59631 73186 98955 209840 279840 289220 350170 36806 39711 37987 48246 58620 33895 43452 56006 50676 18093 37970 57514 76898 101000 205740 274500 280860 340340 49763 53913 39945 49042 58273 35613 41808 52914 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309920000 17968 3794;3964 17038 34079 27297 27297 1 9606 Homo sapiens 0.08539135291448474 LWCTYHEK Unmodified 1135.5121 0.51206481 435 A0A024R7A8;P15121;Q59EL5;E9PCX2 AKR1B1 Aldose reductase yes no 0 0 0 7.5 0.5 1 1 45.612 45.675 3 0.00052782 11740 20230619_1888_Aki_TMTPro18x_K_F8 135.79 104.9 324780 249610 298810 334030 312740 333810 352070 321470 311190 342420 339010 303890 348210 308880 366850 340320 350490 300150 300000 229260 306130 330320 324590 337280 351460 329970 320660 343730 346840 310550 356010 320040 371630 339400 335160 285700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 460580000 17969 435 17039 34080;34081 27298 27298 1 9606 Homo sapiens -0.05027073951305283 LWDCETGK Unmodified 1007.4382 0.43823117 1678 Q13347;A0A7I2YQF8;Q5U0F4;Q53HU7;A0A7I2V613;A0A7I2V607;A0A7I2V3N2;A0A7I2V2M3;A0A7I2V640;A0A7I2YQI2;A0A7I2V3U3;A0A7I2V5V8;A0A7P0MRT9;A0A7I2V685;A0A7I2YQI6;Q5TFK1;A0A7I2YQC8;A0A7I2YQT9;A0A7I2V4S8;A0A7I2V3K6;A0A7I2YQP9;A0A7I2V391;A0A7I2YQN1 EIF3I Eukaryotic translation initiation factor 3 subunit I yes no 0 0 0 4.5 0.5 2 2 51.172 51.223 2;3 0.0022541 14280 20230619_1885_Aki_TMTPro18x_K_F5 129.65 90.628 406380 350320 371050 365120 368450 455870 408950 428550 454370 489490 499820 506700 535450 453050 412860 588470 603510 540570 375620 320840 379850 368930 384510 453480 411570 441160 462380 491890 512150 511950 539700 476190 433450 585980 575160 514170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 448830000 17970 1678 17040 34082;34083;34084;34085 27299;27300 27300 2 9606 Homo sapiens -0.06519042113586693 LWDFQGFECIR Unmodified 1469.6762 0.67617003 1628 A0A6Q8PFU3;P43034;A0A6Q8PFT2;A0A6Q8PG63;A0A6Q8PH33;B4DF38;I3L3N5;B4DZN3;P43034-2 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 0 8 0 1 63.733 63.755 2 3.7706E-06 19440 20230619_1888_Aki_TMTPro18x_K_F8 161.51 123.24 97447 91933 105640 110180 77984 92905 99258 94362 106340 117520 124640 119210 135530 118950 126540 153300 135450 152480 90255 84280 106250 109570 83786 95304 99131 96981 108700 117570 127470 121030 137580 124520 129480 153370 129630 144780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154620000 17971 1628 17041 34086 27301 27301 1 9606 Homo sapiens -0.039881012511614244 LWDIGGQPR Unmodified 1040.5403 0.54032847 559 A0A024R977;Q96BM9;B2R7U5;A0A087X2J2 ARL8A ADP-ribosylation factor-like protein 8A yes no 0 0 0 1 0 1 54.054 54.054 2 0.019666 16069 20230619_1880_Aki_TMTPro18x_K_F1 85.161 0 53461 48580 55149 52296 48609 52791 53831 58244 54818 51100 48363 50706 53687 43582 51184 51452 48623 56835 49481 44497 55761 52558 51127 53491 54041 58925 55545 52001 50186 51248 54487 45630 51954 51879 46603 53895 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25191000 17972 559 17042 34087 27302 27302 1 9606 Homo sapiens 0.02167992020326892 LWDLTTGTTTR Unmodified 1263.6459 0.64591575 2907 P63244;E9KL35;J3KPE3;H0Y8W2;H0YAF8;D6RHH4;D6R9L0;D6R9Z1;D6RFX4;B4DVD2;D6RFZ9;E9PD14;D6RAU2;B4E0C3 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 3.67 3.09 1 1 1 57.41 57.433 2 5.3091E-23 17575 20230619_1881_Aki_TMTPro18x_K_F2 255.07 228.95 1225500 1038600 1126800 1187100 1052000 1240900 1259800 1258300 1346000 1440200 1314500 1244600 1559400 1227400 1350500 1567500 1372200 1434900 1132700 952060 1152200 1187800 1105000 1251200 1261100 1289000 1366200 1439700 1360500 1272300 1573000 1285100 1379400 1561700 1313100 1364000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3877899999.9999995 17973 2907 17043 34088;34089;34090 27303;27304;27305 27304 3 9606 Homo sapiens 0.024638633552513056 LWDVQSK Unmodified 874.45487 0.45486751 922 U3KQC1;A0A0A0MQU0;Q9BV38;K7EIR0;U3KQK3 WDR18 WD repeat-containing protein 18 yes no 0 0 0 7 0.816 1 1 1 52.859 52.933 2 0.018139 14878 20230619_1888_Aki_TMTPro18x_K_F8 107.66 50.384 247130 228060 285360 256740 290990 314400 330930 280390 348540 332000 344510 343550 333280 301980 331610 350570 391510 373120 228990 208970 286640 257810 302670 312870 331820 290280 353900 333200 353230 346820 340620 315400 340630 352730 373880 354220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 570070000 17974 922 17044 34091;34092;34093 27306 27306 1 9606 Homo sapiens 0.012618268346727746 LWEAGWK Unmodified 888.44939 0.4493882 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 0 0 1 0 1 59.774 59.774 2 0.018314 18385 20230619_1880_Aki_TMTPro18x_K_F1 114.02 77.002 98505 86272 100540 92569 86460 116100 106860 117150 120170 122850 109490 95654 135620 96767 110790 115700 113430 112240 91140 79029 101730 93348 91632 115610 107030 119680 121320 123020 113880 98420 136270 100900 113260 115760 108490 106650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62087000 17975 2350 17045 34094 27307 27307 1 9606 Homo sapiens 0.0007014804285745413 LWEEQLAAAK Unmodified 1157.6081 0.60807369 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;A0A0S2Z4D8;A0A0S2Z4W7;A2VCQ4;A0A0S2Z4A0 PRKCSH Glucosidase 2 subunit beta yes no 0 0 0 5.5 1.12 1 1 1 1 58.399 58.444 3 0.00023581 17434 20230619_1886_Aki_TMTPro18x_K_F6 116.52 85.949 230750 202750 229930 229410 235050 283150 266720 278490 328050 261550 277180 275940 291990 232690 281030 304870 287630 287480 213460 185810 233760 230290 244850 282100 268990 284290 328500 265780 287450 278140 296930 245300 286460 304180 275140 273230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 874730000 17976 444 17046 34095;34096;34097;34098 27308;27309;27310 27309 3 9606 Homo sapiens 0.0355739716046628 LWEPLVEEPPADQWK Unmodified 1835.9094 0.90940066 428 A0A024R745;H7BYD0;Q16718;A0A7I2V2W4;A0A087X1G1;A0A7I2V3L8;Q16718-2;A0A024R736;A0A024R772;A0A087WXR5 NDUFA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes no 0 0 0 5.5 0.5 1 1 63.598 63.645 3 2.709E-08 19581 20230619_1885_Aki_TMTPro18x_K_F5 141.54 124.32 113800 96804 130410 127960 128800 151220 138540 156690 170670 135540 137070 135900 155870 133400 149390 145610 128790 145770 105380 88866 131060 126990 134240 151210 140170 159050 170640 138190 143050 137910 158160 138340 150870 146170 123540 138390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190800000 17977 428 17047 34099;34100 27311;27312 27311 2 9606 Homo sapiens 0.02488233949475216 LWEVATAR Unmodified 944.50797 0.50796571 2320 B2RDN4;Q14137;A8K3R2;B4DEN9;Q14137-2;Q4G0D9;Q6DKJ9 BOP1 Ribosome biogenesis protein BOP1 yes no 0 0 0 8 0 1 53.203 53.278 2 0.011483 14942 20230619_1888_Aki_TMTPro18x_K_F8 110.03 44.249 179860 152850 171700 173660 164760 207610 181840 176540 212960 194490 180850 169630 209380 163120 189490 214290 193920 185920 166290 140110 175030 174150 172400 206620 183330 182980 213940 194930 188250 173200 211760 171240 193420 212870 185450 176920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 698500000 17978 2320 17048 34101 27313 27313 1 9606 Homo sapiens 0.033492046173250856 LWEVSVADRR Unmodified 1229.6517 0.65166983 177 K7ERG2;A0A024R1Z4;H7BXP1;Q9NYR9-3;Q9NYR9-2;Q9NYR9 NKIRAS2 NF-kappa-B inhibitor-interacting Ras-like protein 2 yes no 0 0 1 8 0 1 47.846 47.904 3 1.4199E-07 12637 20230619_1888_Aki_TMTPro18x_K_F8 187.99 170.25 46553 44439 43514 41294 45339 54805 44106 47375 69958 45987 39394 33566 42907 35418 39294 49495 44914 37790 43068 40649 44471 42176 47015 54240 45333 48847 68536 46241 41963 34742 43524 37218 40385 48828 42870 36043 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47794000 17979 177 17049 34102 27314 27314 1 9606 Homo sapiens 0.04603006657612241 LWFTLDHPPK Unmodified 1252.6604 0.66044361 3087 H7C0R7;Q9UHQ9 CYB5R1 NADH-cytochrome b5 reductase 1 yes no 0 0 0 3 0 1 58.955 58.984 3 0.00022657 18030 20230619_1882_Aki_TMTPro18x_K_F3 117.02 85.383 32360 30932 35970 38251 40754 48247 48530 47248 53506 43835 46954 43619 46142 39307 47595 46144 47924 49882 29982 28365 36340 38160 42173 47992 48618 48238 53930 44495 48437 44166 47190 41059 48383 46476 45864 47332 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116780000 17980 3087 17050 34103 27315 27315 1 9606 Homo sapiens 0.04421980294068817 LWGDSGIQECFNR Unmodified 1580.7042 0.70417569 1253 A0A142CHG9;P09471-2;P09471;Q8N6I9;H3BTM2;A0A1W2PP87 GNAO1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 6.5 0.5 1 1 58.176 58.237 2 2.3727999999999997E-21 17086 20230619_1887_Aki_TMTPro18x_K_F7 283.58 264.8 169250 146780 154280 162280 119330 147660 142690 149770 146920 189150 200750 220750 215880 200510 231630 205920 237580 265490 156440 134500 157490 162490 127490 150500 142800 153960 151750 189920 204320 221880 220690 207800 235450 210260 227450 251430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 605350000 17981 1253 17051 34104;34105 27316;27317 27317 2 9606 Homo sapiens -0.06294823061762145 LWGLEAQK Unmodified 943.51272 0.51271674 107 A0A024R0R4;Q9UBE0;M0QZS6;B3KNJ4;Q9UBE0-2;Q9UBE0-3;A0A590UK93;A0A590UKC5;M0R375 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes no 0 0 0 4.5 3.5 1 1 56.715 56.743 2;3 0.0019893 16462 20230619_1888_Aki_TMTPro18x_K_F8 147.34 80.166 176140 151690 161860 168670 147940 185090 182620 175570 217390 138520 140080 124480 133910 111800 172140 143440 155380 138720 162810 139010 165480 169220 155940 185680 183140 179060 216130 141710 147090 126700 138700 117440 173280 143460 148710 131860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79849000 17982 107 17052 34106;34107 27318;27319 27319 2 9606 Homo sapiens 0.03870088760083945 LWGLTEMFPER Unmodified 1377.6751 0.67510739 4011 Q9NS69;Q549C5 TOMM22;MST065 Mitochondrial import receptor subunit TOM22 homolog yes no 0 0 0 4.5 3.5 1 1 64.213 64.223 2 1.4862E-08 19610 20230619_1888_Aki_TMTPro18x_K_F8 178.22 140.14 193420 160290 187780 192970 135260 209270 203570 212790 237290 208480 185480 185720 246090 198370 208170 223860 197160 211740 178820 147020 190550 192460 147000 210300 202370 216980 237740 210320 195400 190040 247350 205630 211830 223850 188850 201180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 249930000 17983 4011 17053 34108;34109 27320;27321 27321 2 9606 Homo sapiens 0.0013768437993348925 LWGVIDVK Unmodified 928.5382 0.53820321 228 A0A024R394;Q9UHD1;A0A024R3C3;Q9UHD1-2;E9PHZ2;Q9NZ93 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes no 0 0 0 2 0 1 62.494 62.504 3 0.023889 19750 20230619_1881_Aki_TMTPro18x_K_F2 55.902 36.631 133990 118430 129620 154320 135150 161640 171540 171560 166510 162140 169360 177100 205500 183130 189640 218760 210670 219370 123930 108680 132320 152970 140970 163070 170690 174340 170060 164830 175310 179420 207920 190550 194440 219210 201420 208320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68572000 17984 228 17054 34110 27322 27322 1 9606 Homo sapiens 0.07107563282522733 LWISVAR Unmodified 843.49667 0.49667274 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 5 0 1 55.751 55.815 2 0.0075915 16202 20230619_1885_Aki_TMTPro18x_K_F5 123.99 64.38 88971 80463 85147 89885 86475 103680 100680 101960 111510 90903 93992 92875 86035 75654 99767 98467 98307 99321 82294 73726 86879 90211 90173 103750 101020 103980 112210 92544 96945 93643 88741 79805 101120 98637 94080 94323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92183000 17985 2436 17055 34111 27323 27323 1 9606 Homo sapiens 0.06866427313843815 LWLFGYDEQR Unmodified 1325.6404 0.64043645 4591 Q9NT62;Q9NT62-2 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes no 0 0 0 8 0 1 63.442 63.464 2 1.2313E-09 19278 20230619_1888_Aki_TMTPro18x_K_F8 208.37 176.95 102620 71720 98887 101210 75750 111770 100710 91042 127240 129320 94861 138040 148700 129680 131910 157700 125590 160910 94772 65939 100460 99886 81455 111650 100900 95510 126970 128960 101530 139310 149290 135520 134240 158130 120470 152670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189760000 17986 4591 17056 34112 27324 27324 1 9606 Homo sapiens -0.009358154365372684 LWNEWCR Unmodified 1062.4705 0.47053435 2312 B2RD51;O95456;O95456-2 PSMG1 Proteasome assembly chaperone 1 yes no 0 0 0 1 0 1 56.133 56.133 2 0.022633 16897 20230619_1880_Aki_TMTPro18x_K_F1 101.64 88.135 93590 86460 99728 88977 82510 106360 97809 106090 108640 113880 100320 97249 125040 97703 97676 121810 126450 113740 86657 79159 100490 89963 87585 106220 98131 108550 109820 114160 104370 99526 125510 102100 101520 121500 120620 108160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47701000 17987 2312 17057 34113 27325 27325 1 9606 Homo sapiens -0.05820209919943409 LWNTLGVCK Unmodified 1089.5641 0.56410038 2907 P63244;E9KL35;J3KPE3;H0Y8W2;H0YAF8;H0YAM7;D6RHH4;D6R9L0;D6R9Z1;D6RFX4;B4DVD2;D6RFZ9;D6RBD0;E9PD14;D6RAU2;B4E0C3 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 4.67 0.471 1 2 60.059 60.111 2;3 4.4117E-11 18405 20230619_1883_Aki_TMTPro18x_K_F4 156.92 116.92 278450 322970 247430 183640 450830 1054800 166620 345570 939720 63118 60284 131390 98167 95793 109320 113870 111940 137940 257910 294390 257120 208110 451020 982840 207960 393290 875810 83707 105030 129140 100110 100860 111140 115470 107260 130660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 446460000 17988 2907 17058 34114;34115;34116 27326;27327;27328 27326 3 9606 Homo sapiens 0.022900894624854118 LWPSGDR Unmodified 829.40825 0.40825167 3489 P22234;P22234-2;E9PBS1;B4DGX3;D6RF62 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 6.5 1.12 1 1 1 1 46.743 46.817 2 0.0043317 12082 20230619_1887_Aki_TMTPro18x_K_F7 148.98 120.73 1149300 958930 1040100 1018200 1018700 1255700 1085000 1043800 1210900 1293700 1385000 1374200 1420400 1172700 1319000 1393800 1487100 1376600 1062000 878490 1065300 1026900 1063100 1247000 1094400 1087800 1233900 1296600 1414400 1384600 1443500 1228100 1352600 1396100 1420400 1308100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1144400000 17989 3489 17059 34117;34118;34119;34120 27329;27330 27330 2 9606 Homo sapiens -0.013276129966129702 LWQCGEGFR Unmodified 1151.5182 0.51821282 3267 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 yes yes 0 0 0 7.5 0.5 1 1 52.202 52.277 2 0.0018056 14525 20230619_1888_Aki_TMTPro18x_K_F8 130.31 96.514 114350 90443 109200 113260 93718 114060 111640 119130 120330 141550 121060 118210 144060 114130 121310 151070 138500 140570 105680 83002 111150 112540 99145 115370 111860 121920 122280 141100 125150 120950 145170 119870 124870 150540 132370 133620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136740000 17990 3267 17060 34121;34122 27331 27331 1 9606 Homo sapiens -0.05148555719756587 LWQTTEEIPKR Unmodified 1399.746 0.74596415 4474 S4R369;Q9BZE1 MRPL37 39S ribosomal protein L37, mitochondrial yes no 0 0 1 8 0 1 49.452 49.524 3 4.396E-08 13322 20230619_1888_Aki_TMTPro18x_K_F8 152.96 130.24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17991 4474 17061 34123 27332 27332 1 9606 Homo sapiens 0.0620810068908213 LWQTVVGK Unmodified 929.53345 0.53345218 4727 Q9Y3F4;Q9Y3F4-2;B0AZV0;H0YH33 STRAP Serine-threonine kinase receptor-associated protein yes no 0 0 0 4 0 1 59.046 59.049 3 0.0048247 17916 20230619_1883_Aki_TMTPro18x_K_F4 84.476 21.929 72322 64055 74515 69620 61598 80531 70807 86364 74244 96708 82389 77083 92575 74374 75111 99444 82684 82038 66925 58681 75298 70050 65340 80726 71055 88021 75904 96523 84547 79079 93297 78149 77239 98487 79034 78107 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201740000 17992 4727 17062 34124 27333 27333 1 9606 Homo sapiens 0.06586679139775242 LWTLVSEQTR Unmodified 1231.6561 0.65608651 3592 Q6NZ52;P46776;E9PJD9;Q9BQQ5;E9PLL6 RPL27A;L27a 60S ribosomal protein L27a yes no 0 0 0 1.5 0.5 2 2 61.349 61.354 2;3 1.8732E-09 19169 20230619_1881_Aki_TMTPro18x_K_F2 234.81 174.12 1776000 1595800 1735200 1627500 1500600 2032800 1766000 1901200 2004900 1719700 1171600 1100200 1832800 1230700 1369800 1884900 1794000 1477300 1642900 1461100 1762300 1647500 1587600 2021500 1773100 1945400 1996900 1729600 1269600 1150600 1826300 1301400 1427100 1859100 1710200 1408600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7994499999.999999 17993 3592 17063 34125;34126;34127;34128 27334;27335;27336 27336 3 9606 Homo sapiens 0.04952471080514442 LWVLETK Unmodified 887.51165 0.5116541 3916 Q15061;C9IZK7;C9JEE7 WDR43 WD repeat-containing protein 43 yes no 0 0 0 1.5 0.5 1 1 61.839 61.844 2 0.0069693 19140 20230619_1880_Aki_TMTPro18x_K_F1 128.86 64.654 178220 138790 178770 177410 151590 199240 195670 212400 216380 253880 247620 206940 245970 203470 207630 267700 242900 233430 164750 127410 181190 176320 161040 200020 195490 217060 220660 252850 252200 212280 249240 213430 214090 265890 232000 222110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144990000 17994 3916 17064 34129;34130 27337 27337 1 9606 Homo sapiens 0.06339874391198919 LWYTLDR Unmodified 965.49707 0.49706667 311 P00387-3;P00387;P00387-2;A0A8J8YWN6;A0A8I5KR71;A0A024R4X0;A0A8I5KW26;A0A8J8Z3C6;A0A8I5QKX1;Q6ZVI6;A0A8I5KYU1;A0A087WZB1 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form;NADH-cytochrome b5 reductase yes no 0 0 0 3.67 3.09 1 1 1 57.691 57.713 2 0.0051349 17556 20230619_1880_Aki_TMTPro18x_K_F1 143.23 95.485 358420 290960 320570 353880 318330 398520 407380 427520 456410 371720 395380 383450 409630 337720 425830 433320 434440 438540 331120 266920 329080 352850 333700 400110 407090 433150 459440 379090 409200 387430 418360 355000 433250 434180 415610 416450 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 502860000 17995 311 17065 34131;34132;34133 27338;27339;27340 27338 3 9606 Homo sapiens 0.012938022430375895 LYAGSTVK Unmodified 837.45962 0.45961853 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 0 1.5 0.5 1 1 44.764 44.806 3 0.0070569 12056 20230619_1881_Aki_TMTPro18x_K_F2 84.568 36.007 78680 47073 68700 83424 98392 120540 83349 84117 133640 52523 64023 49175 55143 49383 61767 50053 65456 51898 72555 43437 71164 81628 99673 118130 86390 87601 130240 54891 68472 50163 56933 50967 62824 50439 62499 49323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96742000 17996 682 17066 34134;34135 27341 27341 1 9606 Homo sapiens 0.03438710977422943 LYALGLVPTR Unmodified 1101.6546 0.65462995 4601 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 yes yes 0 0 0 6 0 2 60.916 60.974 2 0.0059709 18513 20230619_1886_Aki_TMTPro18x_K_F6 99.802 74.065 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17997 4601 17067 34136;34137 27342;27343 27342 2 9606 Homo sapiens 0.10786881782405544 LYAMNNI Oxidation (M) 853.40039 0.4003891 3689 V9HW41;P61088;F8VSD4;F8VQQ8 HEL-S-71;UBE2N Ubiquitin-conjugating enzyme E2 N yes no 0 1 0 5.5 0.5 1 1 51.425 51.501 2 0.084969 14503 20230619_1886_Aki_TMTPro18x_K_F6 68.64 68.64 82518 74192 75163 76902 93644 93394 88685 98221 99598 62444 62367 56534 62322 49375 66797 71753 70855 62776 76293 67937 77240 77711 95620 93347 90044 99006 99272 64890 65724 57502 63824 52361 68094 71228 67698 59750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172650000 17998 3689 17068 34138;34139 27344 27344 2376 1 9606 Homo sapiens -0.032175083083984646 LYAMNNI Unmodified 837.40547 0.40547447 3689 V9HW41;P61088;F8VSD4;F8VQQ8 HEL-S-71;UBE2N Ubiquitin-conjugating enzyme E2 N yes no 0 0 0 7 0.816 1 1 1 60.222 60.269 2 0.02587 17917 20230619_1887_Aki_TMTPro18x_K_F7 97.306 84.817 202540 175140 190480 173690 138320 217540 178690 179860 215820 135970 109480 88922 104160 76142 147980 139030 121860 96767 187260 160340 193670 176240 149490 215700 179000 185150 213300 138520 117070 92133 108520 82327 148210 136360 116670 92449 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 273040000 17999 3689 17068 34140;34141;34142 27345;27346 27345 2 9606 Homo sapiens -0.019732044457896336 LYANMFER Unmodified 1042.4906 0.49060109 3789 Q02790;B2R9U2;H0YFG2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 1 0 1 54.608 54.608 2 0.0019754 16247 20230619_1880_Aki_TMTPro18x_K_F1 134.08 109.88 199650 176200 188890 202780 162300 231300 192000 200860 255640 170690 155400 165140 179960 163970 194660 233470 226940 212640 184620 161510 192510 202990 172030 230920 193830 206500 252610 174180 165360 168010 183780 172780 199680 232200 216730 202240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100890000 18000 3789 17069 34143 27347 27347 1 9606 Homo sapiens -0.028944589799721143 LYAPFYSSDILIASPLGLR Unmodified 2095.1354 0.13537785 1999 A8K0P8;Q68CQ4;H7C2R4 DIEXF Digestive organ expansion factor homolog yes no 0 0 0 5 0 1 65.941 65.984 3 1.0121E-14 20558 20230619_1885_Aki_TMTPro18x_K_F5 158.17 145.68 4780.9 3941.2 4124.5 5303.3 6506.3 5889 8019.1 7477.3 10014 4878.2 6408.5 6368.1 7613.6 4258.8 8104.2 7005.9 6861.9 7392.3 4415.9 3619.1 4288.7 5251 6603.1 5948 8048.9 7460.5 9925.1 5121.2 6800.1 6333.3 7740.6 4617.6 8157.6 7020.1 6581.1 7015.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48222000 18001 1999 17070 34144 27348 27348 1 9606 Homo sapiens 0.1316155806871393 LYASHSQFIK Unmodified 1192.6241 0.6240581 4375 Q96KB3;Q9BW91-2;Q9BW91;Q8NG26 NUDT9 ADP-ribose pyrophosphatase, mitochondrial yes no 0 0 0 3 0 1 45.528 45.604 3 5.6422E-05 12123 20230619_1882_Aki_TMTPro18x_K_F3 137.89 106.46 131880 94958 116080 124280 137920 153740 131300 139280 168150 135370 139490 135350 146390 135110 156000 168220 169470 147200 121730 87219 119610 123460 141470 152870 133910 143150 168010 137110 144780 137500 149750 141050 159260 167320 161860 140110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163600000 18002 4375 17071 34145 27349 27349 1 9606 Homo sapiens 0.03545103397368621 LYASILQQK Unmodified 1062.6073 0.6073454 1855 A0A8V8TQW4;O14617-4;O14617;O14617-5;O14617-2;Q6PK82;O14617-3 AP3D1 AP-3 complex subunit delta-1 yes no 0 0 0 3.5 0.5 1 1 57.956 57.973 3 0.00057788 17462 20230619_1883_Aki_TMTPro18x_K_F4 110.12 90.354 84237 76016 94353 91663 78803 96631 97796 94090 108920 97148 93119 84355 94535 79288 97653 112680 97969 83189 78019 69702 94771 91377 83642 97262 97864 96391 109680 97656 96312 86125 96590 83690 99344 111010 93631 79380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73843000 18003 1855 17072 34146;34147 27350 27350 1 9606 Homo sapiens 0.07854602511406483 LYASYEK Unmodified 872.42798 0.42798405 2555 B4DNN4;Q53GZ5;P23921;B4E0I8;E9PL69;B4DXB0;B4DS95;B4DXD1 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 0 0 0 6.5 0.5 1 1 47.223 47.307 2 0.021789 12333 20230619_1887_Aki_TMTPro18x_K_F7 102.77 48.248 624810 443050 605980 667630 771260 838930 726410 735470 887170 619400 784090 658070 718140 594440 645200 628980 826450 678960 577110 407620 620000 657620 787000 832640 739910 755350 889540 634010 805470 664760 731660 617260 667200 634450 787970 644890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265770000 18004 2555 17073 34148;34149 27351 27351 1 9606 Homo sapiens -0.013332817765217442 LYAVFTDYEHDK Unmodified 1499.6933 0.69325988 4270 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 6 0.816 1 1 1 59.461 59.515 3 5.364E-14 17917 20230619_1886_Aki_TMTPro18x_K_F6 189.33 154.64 105370 85920 104230 121820 107400 120870 124320 121670 128360 139390 125990 129620 146860 116070 130750 157200 141990 146790 97421 78948 106140 120020 111750 122280 124500 124730 130560 139600 130330 131590 148410 122390 134010 156640 135780 139510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84781000 18005 4270 17074 34150;34151;34152 27352;27353 27353 2 9606 Homo sapiens -0.036599021643951346 LYAVHQEGNK Unmodified 1157.5829 0.58292157 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C2U0 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 6.5 0.957 1 2 2 1 38.432 38.494 2;3 1.1302E-05 8618 20230619_1887_Aki_TMTPro18x_K_F7 150.1 107.99 141730 105400 123910 127360 156040 150360 145760 158030 191790 152080 166890 161600 179160 142100 162890 166550 189890 161440 130850 96719 127830 127150 159210 150530 148980 160690 191690 154370 172890 163020 181660 148550 167420 166700 181230 153490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3630499999.9999995 18006 3621 17075 34153;34154;34155;34156;34157;34158 27354;27355;27356 27355 3 9606 Homo sapiens 0.010433423579115697 LYAVVTR Unmodified 820.48069 0.48068833 2023;3404 A8K379;P07948;B4DQ79;Q6NUK7;P07948-2 LYN Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lyn no no 0 0 0 3 0.816 1 1 1 47.075 47.141 2 0.060911 12862 20230619_1882_Aki_TMTPro18x_K_F3 81.297 28.134 238170 193820 219230 253560 242300 263040 229740 223670 242410 269430 295300 297350 277690 265320 271140 305060 335810 320550 220080 177940 224800 251190 249520 264380 232860 232550 248490 270680 299760 299530 283910 276720 279570 306700 320570 304350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191550000 18007 2023;3404 17076 34159;34160;34161 27357 27357 1 9606 Homo sapiens 0.06326721076948161 LYCESHAK Unmodified 1006.4542 0.45421558 3618 P50479 PDLIM4 PDZ and LIM domain protein 4 yes yes 0 0 0 6.5 0.5 1 1 35.979 36.046 3 0.00089829 7964 20230619_1886_Aki_TMTPro18x_K_F6 112.84 86.458 30011 23227 32749 30217 36572 31282 29855 36097 38092 27199 33543 27870 30374 22623 31513 25620 55156 28641 27762 21326 33064 29969 37440 31682 30775 36288 38123 27993 34454 28111 31168 23689 33281 25887 52360 27268 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8326100 18008 3618 17077 34162;34163 27358;27359 27358 2 9606 Homo sapiens -0.04875335876693043 LYCPVEFSK Unmodified 1141.5478 0.54778161 3636 P52788;B4DE40;P52788-2 SMS Spermine synthase yes no 0 0 0 4.5 3.5 1 1 56.63 56.63 2;3 2.446E-10 16397 20230619_1888_Aki_TMTPro18x_K_F8 175.44 133.34 68104 57030 57088 55331 48399 49835 57246 57200 60196 90406 85374 78258 93995 72700 77076 103930 80736 90472 62899 52207 58756 56011 51193 51040 57345 58806 62300 89156 86724 79849 94788 76855 79032 103100 77280 86038 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112780000 18009 3636 17078 34164;34165 27360;27361 27361 2 9606 Homo sapiens -0.01733036494283624 LYDAYELK Unmodified 1013.507 0.50696266 3416 V9HWE0;P08758;D6RBL5;E9PHT9;B4DNG6 HEL-S-7;ANXA5 Annexin;Annexin A5 yes no 0 0 0 5.5 0.5 1 1 56.13 56.198 2;3 0.0011869 16336 20230619_1885_Aki_TMTPro18x_K_F5 147.04 46.647 190410 154800 169490 230610 387000 448160 305160 298730 327370 377430 399780 405120 416500 364160 385770 453810 436350 447760 175900 142320 177640 229140 382780 433050 312950 317400 335550 378140 407550 408710 423170 381670 395990 454060 417080 425310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 331580000 18010 3416 17079 34166;34167 27362;27363 27362 2 9606 Homo sapiens 0.0007494545774306971 LYDGLFK Unmodified 854.4538 0.45380487 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;F5GY55;B7Z2A1;F5GWI0;F5H2L3;A0A7P0Z4L2;F5GZY8 DDB1 DNA damage-binding protein 1 yes no 0 0 0 8 0 1 60.044 60.081 2 0.059445 17789 20230619_1888_Aki_TMTPro18x_K_F8 81.958 21.807 91751 74652 91158 99300 86690 97692 98656 93957 104060 118170 111400 107820 128720 108070 114790 140330 120190 129050 84832 68547 92635 98219 90726 98815 98969 96918 106100 117810 114690 109990 130150 113180 117410 139790 115000 122660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47434000 18011 1710 17080 34168 27364 27364 1 9606 Homo sapiens 0.02075612465762333 LYDIDVAK Unmodified 935.4964 0.49639797 3724 P62750;H7BY10;K7EJV9;K7ERT8;A8MUS3;K7EMA7 RPL23A 60S ribosomal protein L23a yes no 0 0 0 5 0.816 2 2 2 55.395 55.446 2;3 0.0011115 16004 20230619_1885_Aki_TMTPro18x_K_F5 106.36 76.171 523320 418710 479080 523760 449080 593130 557360 551370 665350 646550 624490 721500 861690 698320 513950 1055600 803520 1005000 483500 384240 490320 521170 472740 593290 559030 568750 670370 650790 653270 728820 855510 740050 547810 1050300 767400 954310 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3207499999.9999995 18012 3724 17081 34169;34170;34171;34172;34173;34174 27365;27366;27367 27366 3 9606 Homo sapiens 0.02606962803326951 LYDILGVPPGASENELKK Unmodified 1942.0411 0.041143118 409 A0A024R6S1;O60884;T2DN57;T2DPK5;I3L320 DNAJA2 DnaJ homolog subfamily A member 2 yes no 0 0 1 8 0 1 61.421 61.449 3 0.0013556 18380 20230619_1888_Aki_TMTPro18x_K_F8 63.918 38.598 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18013 409 17082 34175 27368 27368 1 9606 Homo sapiens 0.10780419246566453 LYDKIDPEK Unmodified 1119.5812 0.58119023 1953 I3L505;A4UCS3;O14561 NDUFAB1 Acyl carrier protein;Acyl carrier protein, mitochondrial yes no 0 0 1 6 0.816 1 1 1 49.79 49.869 3 0.058595 13735 20230619_1885_Aki_TMTPro18x_K_F5 50.284 17.059 249840 235820 274340 277940 339360 295000 358130 312410 231870 297170 328420 178490 206730 137870 316940 134220 138480 104590 231430 216150 277600 277560 346750 297670 356110 317590 247370 297260 326350 185460 219500 143610 309490 133930 133980 99781 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 624670000 18014 1953 17083 34176;34177;34178 27369;27370 27369 2 9606 Homo sapiens 0.02618288549274439 LYDVVAVFPK Unmodified 1149.6434 0.64339656 3754 P78346;P78346-2;Q5VU10;Q5VU11;B4DJR3 RPP30 Ribonuclease P protein subunit p30 yes no 0 0 0 2 0 1 63.184 63.193 3 0.007735 20077 20230619_1881_Aki_TMTPro18x_K_F2 70.028 44.642 20591 17352 19022 22937 16092 23421 24490 21989 28258 27838 22726 23624 25836 20974 24146 28958 27640 22184 19032 15930 19445 22702 17222 23597 24310 22727 28364 27697 23723 24079 26191 22142 24800 28581 26374 21162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47682000 18015 3754 17084 34179 27371 27371 1 9606 Homo sapiens 0.07456059688274763 LYEALTPVH Unmodified 1041.5495 0.54949617 3987 Q53F02;Q9UKF6;G5E9W3;B4DQR2;A4UCU1 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes no 0 0 0 5.5 0.5 1 1 55.074 55.146 2 6.3584E-06 15907 20230619_1885_Aki_TMTPro18x_K_F5 181.2 166.68 56074 41503 47010 49908 41837 53552 47966 45613 51625 55759 56673 49832 58226 43692 51090 55530 54239 56127 51750 38084 48452 49759 44113 53683 48139 47430 52611 55627 57927 50669 58993 45935 52276 55632 51878 53297 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112140000 18016 3987 17085 34180;34181 27372 27372 1 9606 Homo sapiens 0.030383405859993218 LYEEGSNKR Unmodified 1094.5356 0.53563702 1225 Q6IB71;A0A140VK43;P25788-2;P25788 PSMA3 Proteasome subunit alpha type;Proteasome subunit alpha type-3 yes no 0 0 1 5 0 1 35.933 36.024 3 0.07124 7907 20230619_1885_Aki_TMTPro18x_K_F5 51.268 31.433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18017 1225 17086 34182 27373 27373 1 9606 Homo sapiens -0.00784936913078127 LYEHIVADDRFTK Unmodified 1605.8151 0.81510635 1440 B2R694;A0A384MTQ5;P48449-3;P48449;A0A0G2JQD0;P48449-2 LSS Terpene cyclase/mutase family member;Lanosterol synthase yes no 0 0 1 7 0 1 49.309 49.393 4 0.0032813 13318 20230619_1887_Aki_TMTPro18x_K_F7 80.746 37.662 39958 43703 50373 46215 49574 53836 55398 48660 55471 54997 59404 52175 61656 52663 56455 61937 61513 57337 37106 40001 50271 46596 51662 53767 55524 50253 56668 55172 60819 53154 62609 54795 57806 61825 58777 54523 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60138000 18018 1440 17087 34183 27374 27374 1 9606 Homo sapiens 0.036431399179491564 LYEIGAGTSEVR Unmodified 1293.6565 0.65648044 961 A0A384MR53;A0A0A0MT83;A0A2L0RI93;A0A2L0RI88;A0A2L0RI76;P26440;A0A0S2Z4K7;P26440-2 IVD Isovaleryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 4 0 1 49.856 49.89 2 8.054E-24 13912 20230619_1883_Aki_TMTPro18x_K_F4 256.38 186.11 88543 72814 79937 98016 102460 106650 117620 105330 125800 107160 118180 122880 128010 117680 118210 124110 124500 140550 81810 66864 82383 96989 105000 107160 117890 107790 127330 108730 122090 123870 129930 121880 120760 125530 119170 133260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180430000 18019 961 17088 34184 27375 27375 1 9606 Homo sapiens 0.021398460096861527 LYEIGAGTSEVRR Unmodified 1449.7576 0.75759147 961 A0A384MR53;A0A0A0MT83;A0A2L0RI93;A0A2L0RI88;A0A2L0RI76;P26440;A0A0S2Z4K7;P26440-2 IVD Isovaleryl-CoA dehydrogenase, mitochondrial yes no 0 0 1 7 0 1 43.599 43.678 3 0.01347 10796 20230619_1887_Aki_TMTPro18x_K_F7 65.172 36.967 36737 26293 37221 38039 40053 42117 44823 39463 46464 38747 48026 38852 38477 31972 43730 37620 43346 40393 33947 24178 37820 37493 41480 42212 44959 40498 47256 39214 48733 39238 39813 33515 44320 37891 41456 38347 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30638000 18020 961 17089 34185 27376 27376 1 9606 Homo sapiens 0.05070297712381944 LYELDGLR Unmodified 977.5182 0.51819605 2291 Q5LJB0;B2RB07;Q9Y5K5-2;Q9Y5K5-4;Q9Y5K5-3;Q9Y5K5;Q5LJA5;Q5LJA9;H0Y6Y4;B4DW59;B7Z9U9;H0Y4E0 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes no 0 0 0 4.5 0.5 1 1 55.341 55.379 2 0.0036077 15977 20230619_1885_Aki_TMTPro18x_K_F5 118.89 78.937 443430 342780 378650 435000 396640 455390 462650 459980 515030 528370 483780 476010 578230 454310 475200 583100 511020 562730 409390 314650 390690 431950 412650 459000 464240 471400 520810 528730 501870 485000 582010 476390 487620 582430 488950 534510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152640000 18021 2291 17090 34186;34187 27377;27378 27378 2 9606 Homo sapiens 0.02853767551891906 LYELGGEPERK Unmodified 1289.6616 0.66156582 1061 A0A0S2Q0B1;O14497;O14497-2;H0Y488;A0A1B0GTU5;O14497-3;Q96TA9;Q4LE49 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A yes no 0 0 1 4.5 0.5 1 1 45.684 45.745 3 0.0080734 12064 20230619_1883_Aki_TMTPro18x_K_F4 69.864 40.536 98134 75552 87860 105680 97734 107380 101760 109620 119680 126800 123440 130150 130980 113150 117790 134540 147020 140250 90630 69426 90360 104230 100890 108480 102950 112270 121130 127300 126840 131370 132850 118420 121710 135130 140340 133170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161610000 18022 1061 17091 34188;34189 27379 27379 1 9606 Homo sapiens 0.028321498723244076 LYENFISEFEHR Unmodified 1582.7416 0.74160705 179 Q53GN6;A0A024R201;Q9UNM6;J3KNQ3;Q9Y6E3;E9PPD2;E9PQG3 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 4.5 0.5 1 1 62.122 62.149 3 8.3233E-05 18885 20230619_1885_Aki_TMTPro18x_K_F5 113.34 90.103 77164 61746 76711 81092 62725 80190 76445 74720 72832 91662 89746 88866 101600 80822 83369 107560 92810 93120 71338 56692 77789 80284 66691 81001 76222 77187 75172 91608 91791 90099 102410 85057 85752 106780 88710 88597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117770000 18023 179 17092 34190;34191 27380 27380 1 9606 Homo sapiens -0.026454085244949965 LYEPDQLQELK Unmodified 1374.7031 0.70309628 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;A0A0C4DG79 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 0 0 4.5 0.5 1 1 58.34 58.37 2 0.0096715 17664 20230619_1883_Aki_TMTPro18x_K_F4 73.985 30.281 14583 10526 14122 12184 13762 16787 16976 15662 17802 19781 20967 24837 24028 21355 18866 21773 24167 27889 13471 9656.5 14371 12236 14420 16598 16956 16188 18225 19921 21519 24848 24189 22168 19584 22207 23098 26410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37476000 18024 1839 17093 34192;34193 27381 27381 1 9606 Homo sapiens 0.030732858409919572 LYEWTTEK Unmodified 1068.5128 0.51277632 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5;Q16531-2 DDB1 DNA damage-binding protein 1 yes no 0 0 0 6 0.816 1 1 1 55.602 55.669 3 0.0030437 16289 20230619_1886_Aki_TMTPro18x_K_F6 89.355 28.526 110880 95380 109550 110050 106310 121040 113620 118770 130480 138060 133970 138850 148010 117210 132900 155150 139660 138560 102550 87436 111350 110120 110930 121530 114720 121990 132190 138490 137940 140190 149830 123640 135900 154310 133550 131790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228180000 18025 1710 17094 34194;34195;34196 27382 27382 1 9606 Homo sapiens -0.018739560305675695 LYFLQCETCHSR Unmodified 1612.7126 0.71263189 2657 Q6IBR8;B5BU01;P20042;Q96I16 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 3.67 3.09 1 1 1 49.967 50.011 3 9.390699999999999E-32 14338 20230619_1880_Aki_TMTPro18x_K_F1 277.15 265.77 253390 207130 234940 252350 223440 271000 275130 256200 282800 291010 299210 296500 299340 241310 278150 318280 306610 304060 234160 190020 240170 251390 234570 272240 274650 263760 288370 292360 306230 298930 304420 254850 285010 317700 293070 288960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 833930000 18026 2657 17095 34197;34198;34199 27383;27384;27385 27383 3 9606 Homo sapiens -0.06921592416779276 LYFSTCPFR Unmodified 1189.559 0.559015 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 5.5 0.5 1 1 58.477 58.538 2 3.5233E-05 17300 20230619_1885_Aki_TMTPro18x_K_F5 186.13 174.98 171070 146590 164480 175600 165960 200510 187240 187940 202710 134600 131470 101000 119120 104750 155860 147280 134200 107370 158180 134430 167750 175290 172980 200520 188020 191440 202580 138000 137600 104410 123760 110130 156600 145130 128420 102500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82123000 18027 81 17096 34200;34201 27386;27387 27386 2 9606 Homo sapiens -0.02818214400144825 LYGAQFHPEVGLTENGK Unmodified 1858.9214 0.92136233 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 7 0 1 52.768 52.838 3 4.0698E-09 14828 20230619_1887_Aki_TMTPro18x_K_F7 124.2 107.53 104490 79461 102980 102340 92607 112950 101880 104440 130560 142850 129520 128180 177720 129310 105950 160220 142990 167370 96565 72956 104580 101610 97396 113190 103120 108290 131490 141880 134940 130850 176320 135130 111350 160740 136620 158810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128070000 18028 1182 17097 34202 27388 27388 1 9606 Homo sapiens 0.026258506926524205 LYGDADYLEER Unmodified 1342.6041 0.60411052 3468 P17812;A0A3B3IRI2;B4E1E0;A0A8Q3WKZ7;B4DMB5;P17812-2 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 1.5 0.5 1 1 52.76 52.777 2 3.8346E-12 15476 20230619_1880_Aki_TMTPro18x_K_F1 209.21 185.78 260750 185650 212810 250540 185700 237280 215260 219950 245480 337160 326860 350490 371120 318370 285650 414610 389080 412490 240550 170580 220000 247430 196240 240460 216430 229080 252060 334730 333530 354100 373390 334550 298400 414570 371430 391720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 851650000 18029 3468 17098 34203;34204 27389;27390 27389 2 9606 Homo sapiens -0.05348737123927094 LYGDVPFIEER Unmodified 1336.6663 0.66631685 701 Q9NRF8;A0A024RC00;Q9H6Q0 CTPS2 CTP synthase 2;CTP synthase yes no 0 0 0 3.5 0.5 1 1 60.906 60.922 2 0.00021693 18792 20230619_1882_Aki_TMTPro18x_K_F3 155.5 110.86 96879 79030 81373 86287 142430 250640 114110 122820 231800 67871 74037 85140 86801 85428 82880 102250 103330 119270 89461 72425 85023 88570 143400 237750 120150 132690 222680 72576 83985 85742 88196 88968 85586 103360 98780 113050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52068000 18030 701 17099 34205;34206 27391 27391 1 9606 Homo sapiens 0.011450340150986449 LYGPSSVSFADDFVR Unmodified 1658.794 0.79403655 346 P50454;A0A024R5K8;A8K259;B4DN87;E9PJH8;E9PPV6;E9PR70;E9PMI5;E9PK86;E9PNX1;Q9NPA9;E9PRS3;E9PIG2;E9PQ34 SERPINH1;ra-a47 Serpin H1 yes no 0 0 0 7 0.816 2 2 2 62.124 62.162 2;3 6.1084E-42 18769 20230619_1887_Aki_TMTPro18x_K_F7 284.28 243.29 247610 199800 229800 276980 266930 320480 698940 752670 809020 399300 360430 437050 452850 373940 499590 492430 432300 516730 228800 183550 236310 274350 286020 330230 682070 728940 798370 423800 395770 440060 461580 394150 503470 494310 414860 490230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1013899999.9999999 18031 346 17100 34207;34208;34209;34210;34211;34212 27392;27393 27392 2 9606 Homo sapiens -0.00900870181544633 LYGPTNFAPIINHVAR Unmodified 1781.9577 0.95768826 2180 Q99829;B0QZ18;F2Z2V0;A6PVH9;E7ENH5;Q59EI4;Q5JX45;H0Y524 CPNE1 Copine-1 yes no 0 0 0 5.5 0.5 1 1 57.222 57.287 3 2.4938999999999997E-19 16963 20230619_1886_Aki_TMTPro18x_K_F6 203.32 183.58 80325 66022 72624 78242 78680 88058 86353 82753 107560 88262 79276 79125 80307 80119 84282 92331 97033 83525 74218 60548 74545 78148 81511 88185 87247 85058 107220 88689 82732 80781 82234 83201 86377 92084 92624 79475 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 606230000 18032 2180 17101 34213;34214 27394;27395 27395 2 9606 Homo sapiens 0.09798772380031551 LYGPTNFSPIINHVAR Unmodified 1797.9526 0.95260288 561 O75131;A0A024R994 CPNE3 Copine-3 yes no 0 0 0 5 0 1 55.44 55.504 3 8.5171E-26 16032 20230619_1885_Aki_TMTPro18x_K_F5 228.03 210.29 160920 94417 110260 116530 86239 113180 122000 122360 72984 71003 73835 74752 80399 69591 92145 84291 81455 89630 148150 86754 115910 115850 92580 114860 119490 123030 77155 74565 76098 75616 82402 72738 92861 84793 78096 85044 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179990000 18033 561 17102 34215 27396 27396 1 9606 Homo sapiens 0.0855446851742272 LYGSAGPPPTGEEDTAEKDEL Unmodified 2174.9855 0.98553831 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 1 2.33 1.25 1 1 1 54.711 54.723 3 1.0017E-36 16235 20230619_1880_Aki_TMTPro18x_K_F1 177.6 169.7 188210 146360 165130 174500 163290 208640 211250 199070 216230 248620 250650 241090 270040 216240 242960 312960 265310 286490 173800 134270 169760 174390 171280 208110 210360 205340 221520 248320 256340 244410 273610 229030 249170 311220 253780 272310 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1510499999.9999998 18034 3429 17103 34216;34217;34218 27397;27398;27399;27400;27401 27398 5 9606 Homo sapiens -0.0549550352238839 LYHDIAQQAFK Unmodified 1332.6826 0.68263561 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 1.5 0.5 1 1 51.87 51.889 3 0.00092808 15191 20230619_1880_Aki_TMTPro18x_K_F1 91.549 69.992 115210 83426 106500 128890 116420 117450 134660 147210 159890 138790 118720 133700 140600 102910 112780 146370 142710 148100 106390 76772 109200 126240 120590 120290 135490 148080 159830 140530 124780 134890 141420 109560 117010 146370 136290 140630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 531560000 18035 3152 17104 34219;34220 27402 27402 1 9606 Homo sapiens 0.02960159971826215 LYHEADK Unmodified 874.41848 0.418482 3313 O75663 TIPRL TIP41-like protein yes yes 0 0 0 3.5 0.5 1 1 36.538 36.583 3 0.0012699 8201 20230619_1882_Aki_TMTPro18x_K_F3 124.08 91.556 50898 14663 68602 76006 97382 80186 79343 100060 82091 50151 97101 104870 69902 66026 86065 32885 96121 91220 47009 13978 68660 71654 98112 81140 81203 99485 83888 54993 97810 102590 73011 67651 87482 37025 91837 86041 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34581000 18036 3313 17105 34221;34222 27403;27404 27403 2 9606 Homo sapiens -0.02375050062050832 LYHEATTDTYK Unmodified 1340.6248 0.62484596 3179 L0R5D5;Q9BUB7-2;Q9BUB7 TMEM70 Transmembrane protein 70, mitochondrial yes no 0 0 0 4.67 0.471 1 2 41.804 41.868 3 5.9918E-05 10316 20230619_1885_Aki_TMTPro18x_K_F5 124.67 91.722 71789 38329 75042 78623 105760 96428 91987 104380 91614 89105 108310 107900 93603 90093 90995 77489 119400 100630 66262 35470 76420 76266 106860 96308 93582 105620 94013 91405 109700 108050 95964 92829 94056 79430 113840 95404 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210850000 18037 3179 17106 34223;34224;34225 27405;27406 27406 2 9606 Homo sapiens -0.03184146744251848 LYHPAPER Unmodified 981.50321 0.50321468 3045 H0YF29;Q6P1X6-2;Q6P1X6 C8orf82 UPF0598 protein C8orf82 yes no 0 0 0 5 0.816 1 1 1 32.317 32.376 3 0.0024905 6529 20230619_1885_Aki_TMTPro18x_K_F5 103.56 74.09 100880 56074 91957 117640 129140 134990 131530 138300 162450 84596 105510 97939 82470 81228 111940 78663 120630 85486 93028 51900 94879 113820 131250 135140 133360 139610 161170 88904 109930 98307 86424 84151 113590 79599 115090 81252 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65027000 18038 3045 17107 34226;34227;34228 27407;27408 27407 2 9606 Homo sapiens 0.011723204745635485 LYHSCADPTGCGTGPDAR Unmodified 1933.8047 0.80469437 4662 Q9UHL4;R4GMU5 DPP7 Dipeptidyl peptidase 2 yes no 0 0 0 5.5 1.5 1 1 37.126 37.17 3 6.705900000000001E-24 8385 20230619_1883_Aki_TMTPro18x_K_F4 204.13 200.03 43933 23943 40301 47270 42219 42803 43928 42442 47114 53629 64131 63592 55614 53725 50354 62527 62391 60571 40511 22141 41305 45715 43725 43590 44312 43709 48502 53887 64613 63779 56826 56167 52029 62553 59566 57558 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118340000 18039 4662 17108 34229;34230 27409;27410;27411 27409 3 9606 Homo sapiens -0.12485578861083013 LYIWSGR Unmodified 893.47594 0.4759373 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4;Q05C05;P51610-3 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 5 0 1 55.237 55.303 2 0.036173 15955 20230619_1885_Aki_TMTPro18x_K_F5 92.467 38.945 168240 157270 164260 182860 162750 205340 175590 179250 195820 198760 206830 196940 201170 169690 196480 211840 209650 203010 155680 144140 167310 182860 169740 205310 176990 185450 198820 199770 211400 199140 205260 178170 200690 211680 200420 192940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62221000 18040 1331 17109 34231 27412 27412 1 9606 Homo sapiens 0.024938369341953148 LYKDDQLLDDGK Unmodified 1421.7038 0.70382456 1399 A0A8I5KUS5;A0A384MDL3;Q15370;Q15370-2;B8ZZU8 TCEB2 Transcription elongation factor B polypeptide 2 yes no 0 0 1 4 0 1 51.922 51.95 3 0.00016845 14869 20230619_1883_Aki_TMTPro18x_K_F4 107.93 86.168 659260 555890 647160 589470 540240 612870 709740 643570 591040 809300 799860 699770 844870 513310 772090 726630 620620 458700 609630 509240 656530 593390 573850 618930 702410 659860 618060 805000 812240 709130 855550 547510 777730 712100 594150 439110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 901190000 18041 1399 17110 34232 27413 27413 1 9606 Homo sapiens 0.009840804900250077 LYKEELEQTYHAK Unmodified 1650.8253 0.82533668 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 LMNB1 Lamin-B1 yes no 0 0 1 6.25 0.829 1 1 2 48.379 48.46 3;4 0.001591 12924 20230619_1887_Aki_TMTPro18x_K_F7 88.101 59.125 75363 63083 72677 65408 82240 79834 66120 69734 75905 81974 92878 79171 83384 59870 84445 68565 83682 70586 69675 57780 74119 66102 84171 79469 67968 72244 77490 82086 93990 79855 85357 62914 85714 68936 79983 67069 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1694799999.9999998 18042 3482 17111 34233;34234;34235;34236 27414;27415 27415 2 9606 Homo sapiens 0.025957028525454007 LYLADPMK Unmodified 949.49429 0.49428948 3608 P49458;Q6P2S0;Q659G3;E9PE20;A0A024R3P3;P49458-2 SRP9;DKFZp564M2223 Signal recognition particle 9 kDa protein yes no 0 0 0 7.67 0.471 1 2 57.562 57.614 2;3 0.0068953 16781 20230619_1888_Aki_TMTPro18x_K_F8 117.02 62.611 316600 252580 279190 291060 331660 465460 362990 371080 443790 99636 94214 71096 82972 73386 193240 110430 116110 74675 292420 231600 287750 293030 342180 454920 366370 378230 432450 115100 112720 73937 90433 77540 189830 108650 111550 71458 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 217350000 18043 3608 17112 34237;34238;34239 27416;27417;27418 27417 3 9606 Homo sapiens 0.01752210793881659 LYLEREEYGK Unmodified 1298.6507 0.65066678 3691 Q53HJ0;Q59EL2;P61201;P61201-2;B2R6N0;B4DIH5;H0YKU5;H0YM03 COPS2 COP9 signalosome complex subunit 2 yes no 0 0 1 4.5 0.5 1 1 46.591 46.651 3 0.037999 12352 20230619_1885_Aki_TMTPro18x_K_F5 57.032 37.935 100280 85813 101760 99233 101580 107510 108700 109410 125530 112770 116990 104190 132650 100190 115900 135440 131340 123310 92766 78669 103220 99267 105690 108160 109730 111720 126580 113550 121020 106140 134020 105400 119100 134800 125460 117280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161240000 18044 3691 17113 34240;34241 27419 27419 1 9606 Homo sapiens 0.013287474980188563 LYLINSPVVR Unmodified 1172.6917 0.69174374 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;A0A804HK69;A0A804HKU1 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0 1 57.683 57.741 3 2.2555E-07 16970 20230619_1885_Aki_TMTPro18x_K_F5 182.65 151.42 24800 20466 21411 24176 22104 25938 21501 21025 24957 21604 21650 20262 19630 16402 26700 21856 23169 16875 22907 18769 22057 24130 22915 25983 21826 21843 25092 21771 22287 20506 20432 17328 26802 21616 22159 16104 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93705000 18045 1736 17114 34242 27420 27420 1 9606 Homo sapiens 0.11230553328164206 LYLNETFSELR Unmodified 1383.7034 0.70343063 2980 F8VPD4;P27708;Q53SY7;H7C3Z5 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 6.5 0.5 1 1 61.189 61.236 2 0.0046774 18660 20230619_1886_Aki_TMTPro18x_K_F6 104.43 74.961 70005 52323 70640 61704 55346 76608 66098 68028 85148 87320 77896 97831 92662 89755 96238 99113 88555 111940 64702 48001 71435 61769 59140 76107 66645 70591 85431 87550 81073 98486 94342 93312 97399 100160 84965 106100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210710000 18046 2980 17115 34243;34244 27421 27421 1 9606 Homo sapiens 0.026927055608439332 LYLNVLNR Unmodified 1003.5815 0.581465 1879 A0A994J5K1;Q5SXN9;Q10713;Q10713-2 PMPCA Mitochondrial-processing peptidase subunit alpha yes no 0 0 0 4.5 0.5 1 1 56.904 56.937 2 0.031513 16667 20230619_1885_Aki_TMTPro18x_K_F5 92.822 60.705 56911 51404 58293 54568 60676 72649 65215 64346 76768 60234 50435 42386 48342 44689 63863 57247 57628 54178 52668 47079 59124 55116 63010 71902 65836 66175 76482 60600 52879 43954 50179 46688 64286 57176 55174 51504 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35648000 18047 1879 17116 34245;34246 27422 27422 1 9606 Homo sapiens 0.07981753059812036 LYLPPSTPDFSR Unmodified 1391.7085 0.70851601 3615 P49916-3;P49916;B7Z6I3 LIG3 DNA ligase 3;DNA ligase yes no 0 0 0 1.5 0.5 1 1 58.29 58.297 2 0.061874 17952 20230619_1881_Aki_TMTPro18x_K_F2 61.593 39.507 39352 32599 37397 36943 37498 46238 43324 45962 64415 41331 43369 41865 45245 38814 45692 40866 46962 46843 36375 29883 38159 37090 39180 46035 43983 46832 63510 42087 45560 42380 46152 40259 46496 41387 44920 44429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29231000 18048 3615 17117 34247;34248 27423 27423 1 9606 Homo sapiens 0.028330094234434 LYLPVQNK Unmodified 973.55967 0.55966693 4755 Q9Y6A4 CFAP20 Cilia- and flagella-associated protein 20 yes yes 0 0 0 3 0 1 54.065 54.118 2 0.0039079 16008 20230619_1882_Aki_TMTPro18x_K_F3 118.01 79.877 100790 85054 96032 96617 106650 133570 117390 111270 132970 50835 53582 43353 50462 38516 78771 54453 52131 48830 93181 77964 98142 97119 110370 131710 118150 113600 131140 54556 58580 44297 52933 40754 77996 54228 50113 46450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46847000 18049 4755 17118 34249 27424 27424 1 9606 Homo sapiens 0.0718294831123103 LYNLFLK Unmodified 909.53239 0.53238955 4365 Q96I99;Q3ZCW5;E9PDQ8;Q96I99-2;B7Z2D5 SUCLG2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 6 0 1 63.224 63.272 2 0.014346 19586 20230619_1886_Aki_TMTPro18x_K_F6 112.75 62.706 137500 112020 93528 107960 129640 157970 144980 159190 155480 49699 53009 58867 45631 49673 108570 59637 96061 57518 126800 102550 99338 110090 132430 155950 145520 159530 153350 56527 59081 59129 49940 52005 108310 59814 91764 54794 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155310000 18050 4365 17119 34250 27425 27425 1 9606 Homo sapiens 0.07400464770842063 LYNNHEIR Unmodified 1057.5305 0.53049207 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2V5Q6;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 5.5 1.12 1 1 1 1 33.774 33.84 3 0.00030854 7173 20230619_1886_Aki_TMTPro18x_K_F6 149.19 67.891 320850 198190 292850 298460 378730 382580 346380 355290 401080 353480 421280 414760 426480 352090 370580 384110 465580 404310 296010 182460 301090 294170 385580 379810 352860 364730 406180 359280 431410 416210 432440 366980 383090 386630 444120 384030 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2060699999.9999998 18051 1680;2265 17120 34251;34252;34253;34254 27426;27427;27428;27429 27428 4 9606 Homo sapiens 0.0040280401492509554 LYNSEESRPYTNK Unmodified 1599.7529 0.75290002 4632 Q9NYV4-2;Q9NYV4;J3QSD7;Q9NYV4-3 CDK12 Cyclin-dependent kinase 12 yes no 0 0 1 7 0 1 41.024 41.092 3 5.6455E-08 9689 20230619_1887_Aki_TMTPro18x_K_F7 159.6 120.09 61762 46719 58844 62979 68206 76036 70098 70735 68011 72208 78935 76343 87945 68774 70214 92964 84817 84510 57060 42916 60188 62422 70149 75759 70523 72660 69876 73011 80841 77118 88594 72483 72642 92489 81009 80358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57948000 18052 4632 17121 34255 27430 27430 1 9606 Homo sapiens -0.0229863122099232 LYNSYPFR Unmodified 1058.5185 0.5185304 4811 yes no 0 0 0 2.86 0.639 2 4 1 36.665 36.719 3 0.0091584 8401 20230619_1882_Aki_TMTPro18x_K_F3 77.923 34.115 + 596020 432030 557350 572510 683320 657860 630010 667480 797790 673010 804940 768880 759850 656960 681430 739030 923640 790580 550440 396870 571220 567760 697960 659130 643640 681240 803070 682980 823180 772650 773540 685670 707910 744120 880460 750830 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 577520000 18053 4811 17122 34256;34257;34258;34259;34260;34261;34262 27431;27432 27432 2 9606 Homo sapiens -0.008388127282387359 LYNTCAVFGPDGTLLAK Unmodified 1838.9237 0.92367052 4576 V9HW91;Q9NQR4;H7C579;B4DFB1;B7Z3F9 HEL-S-8a;NIT2 Omega-amidase NIT2 yes no 0 0 0 1.5 0.5 1 1 62.625 62.63 3 1.1099E-13 19784 20230619_1881_Aki_TMTPro18x_K_F2 159.79 144.03 374570 313490 352350 393750 349340 428340 382830 392100 403540 360400 348060 372580 362440 324590 416080 400330 387480 440860 346240 287650 360030 391440 364360 429550 384790 402260 407720 366370 360730 376070 372120 340420 420510 403390 371380 418110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 178630000 18054 4576 17123 34263;34264 27433;27434 27433 2 9606 Homo sapiens 0.037765631061120075 LYNTESQSFR Unmodified 1243.5833 0.5833155 2965 F5GZ90;Q9NZJ0-2;Q9NZJ0 DTL Denticleless protein homolog yes no 0 0 0 6 0 1 44.259 44.351 2 3.5259E-07 11407 20230619_1886_Aki_TMTPro18x_K_F6 189.18 171.67 39755 28652 34280 40374 32064 34945 37208 34653 41772 55649 55414 45015 52020 43107 41717 53744 41915 37435 36691 26338 35279 39723 33632 35743 37372 35996 42894 54773 55977 46139 52686 45080 42681 52899 40071 35745 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21369000 18055 2965 17124 34265 27435 27435 1 9606 Homo sapiens -0.02873282712926084 LYPAAVDTIVAIMAEGK Unmodified 1760.9383 0.93825795 4682 Q9ULC4;Q9ULC4-3;Q9ULC4-2 MCTS1 Malignant T-cell-amplified sequence 1 yes no 0 0 0 2.5 0.5 1 1 67.413 67.436 3 4.3924E-15 21752 20230619_1881_Aki_TMTPro18x_K_F2 134.9 113.65 16142 10905 12506 14251 13448 14941 12400 12528 11825 13522 14880 13870 17845 12633 14962 18712 17716 17636 14882 10019 13029 14121 13874 15000 12555 12996 12214 13621 15246 14039 17966 13404 15437 18632 16923 16763 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23472000 18056 4682 17125 34266;34267 27436;27437 27436 2 9606 Homo sapiens 0.08822635254250599 LYPEGLAQLAR Unmodified 1229.6768 0.67682195 2247 J3QL14;B2R7M1;F5GYQ1;B7Z6L9;P61421 ATP6V0D1 V-type proton ATPase subunit d 1 yes no 0 0 0 1 0 1 58.6 58.6 2 1.7031E-08 17924 20230619_1880_Aki_TMTPro18x_K_F1 157.34 100.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18057 2247 17126 34268 27438 27438 1 9606 Homo sapiens 0.07117061460189689 LYPELSQYMGLSLNEEEIR Unmodified 2283.1093 0.10929904 481 A0A024R7Z5;O00560-3;O00560;O00560-2;B4DHN5;E9PBU7;G5EA09 SDCBP Syntenin-1 yes no 0 0 0 5 0 1 64.292 64.336 3 9.658E-06 19882 20230619_1885_Aki_TMTPro18x_K_F5 95.554 86.3 20993 15783 22827 24590 16093 19479 22515 27056 22690 22852 27814 27496 29820 25031 27182 28441 30076 35598 19415 14524 22947 24041 17424 20242 22363 27000 23301 23447 28383 27636 30242 26094 27855 28920 28786 33715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49526000 18058 481 17127 34269 27439 27439 1 9606 Homo sapiens 0.019068760443133215 LYPESQGSDTAWR Unmodified 1508.6896 0.68957148 3136 Q14197;J3KS15;J3QRF8 ICT1 Peptidyl-tRNA hydrolase ICT1, mitochondrial yes no 0 0 0 4 0 1 49.688 49.723 2 3.7058E-15 13816 20230619_1883_Aki_TMTPro18x_K_F4 205.07 188.82 41026 34788 45169 41975 44297 53147 52869 50765 59284 51088 61509 54071 60768 45825 54352 53886 55722 56755 37976 31906 45519 41961 46333 52828 53010 52030 60075 51719 62916 54511 61691 48000 55455 54187 53309 53872 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81945000 18059 3136 17128 34270 27440 27440 1 9606 Homo sapiens -0.044425719382388706 LYPFQCFLAHDQAVR Unmodified 1863.909 0.90902351 4276 Q8WUA4;Q53SY8;H0Y4Q6;H7C3X9 GTF3C2 General transcription factor 3C polypeptide 2 yes no 0 0 0 3.5 0.5 1 1 60.989 61.005 3 1.3727E-33 18837 20230619_1882_Aki_TMTPro18x_K_F3 258.91 234.06 58725 43884 52597 62750 50740 57102 57644 56908 71924 66834 64580 71355 78560 63891 69483 84167 84294 91970 54225 40341 53972 61719 53082 58152 58164 58442 72185 67166 67263 71985 79307 67252 71714 84637 80562 87243 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 245850000 18060 4276 17129 34271;34272 27441;27442 27441 2 9606 Homo sapiens 0.011625357486082066 LYPGSVYGR Unmodified 1010.5185 0.5185304 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 3 0 1 47.06 47.139 2 0.00021894 12840 20230619_1882_Aki_TMTPro18x_K_F3 143.61 85.032 236740 204520 225450 247350 217510 267340 246820 250250 267530 279950 324450 292800 299490 248950 286170 293220 304820 266160 218900 187570 230000 246540 227580 268380 247920 257650 273610 281690 328900 295300 305740 260560 292290 292460 291200 253220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115810000 18061 1432 17130 34273 27443 27443 1 9606 Homo sapiens 0.01369187271757255 LYPPSAEYPDLRK Unmodified 1547.7984 0.79839365 3442 P12532;F8WCN3;B4DFE8;C9JSQ1;C9JJX8;B4DKA2;C9J8F6;C9J995 CKMT1A;CKMT1B Creatine kinase U-type, mitochondrial yes no 0 0 1 1 0 1 51.541 51.541 3 0.00036015 14982 20230619_1880_Aki_TMTPro18x_K_F1 94.507 53.93 156700 145450 167790 174560 83388 85978 125420 128480 113760 201490 203120 202480 195610 168490 205180 218810 210880 225080 145100 133350 168250 172820 94291 94738 123920 130400 120410 199500 203910 204340 200310 177590 208870 219390 201810 213660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71057000 18062 3442 17131 34274 27444 27444 1 9606 Homo sapiens 0.04640639032004401 LYPVLQQSLVR Unmodified 1314.766 0.76597131 4048 Q5RKV6 EXOSC6 Exosome complex component MTR3 yes yes 0 0 0 5 0 1 59.484 59.538 2 0.00026424 17694 20230619_1885_Aki_TMTPro18x_K_F5 147.4 77.137 74601 64069 68463 64736 69062 79889 77959 72705 91424 33181 36472 30758 31244 26727 52349 33431 35629 29715 68956 58665 70051 65570 71985 79482 78460 73733 89978 35692 39789 31259 33072 28053 51831 33344 34210 28285 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27646000 18063 4048 17132 34275 27445 27445 1 9606 Homo sapiens 0.12117896419681529 LYPWGVVEVENPEHNDFLK Unmodified 2284.1164 0.11643333 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;H7C2Y0 SEPT2 Septin-2 yes no 0 0 0 5 1 1 1 62.595 62.623 3 4.3392E-11 19282 20230619_1886_Aki_TMTPro18x_K_F6 143.02 126.79 135710 130700 116390 143640 101260 110680 157320 161790 156250 153860 182950 192850 191510 141730 147840 223610 157760 190330 125480 119720 119810 143650 107860 115640 155350 161580 160220 156990 186850 192410 192940 152210 152100 221280 151080 181010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 382820000 18064 3910 17133 34276;34277 27446;27447 27447 2 9606 Homo sapiens 0.025739767070263042 LYQAGEGR Unmodified 892.44028 0.44028008 2493 B4DT77;B4DWU2;B4DHY4;Q53HM8;P20073-2;P20073;B2R7L2;B2R657 ANXA7 Annexin;Annexin A7 yes no 0 0 0 4.5 0.5 1 1 36.661 36.73 2 0.015357 8184 20230619_1885_Aki_TMTPro18x_K_F5 93.162 56.142 35849 20531 38466 41422 47484 54539 47525 51221 53636 48762 54415 61595 55814 52841 62946 33001 67960 61037 33106 18987 39018 40245 48621 54028 48113 52473 54318 49808 55929 61569 57297 53761 63983 35158 64927 57702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89208000 18065 2493 17134 34278;34279 27448 27448 1 9606 Homo sapiens -0.010242453134651441 LYQGHTLR Unmodified 986.52976 0.52976379 2437 H0YDU2;E9PRI1;Q53ES5;B3KX63;Q96NY9 MUS81 Crossover junction endonuclease MUS81 yes no 0 0 0 2 0 1 34.553 34.61 3 0.0013456 7530 20230619_1881_Aki_TMTPro18x_K_F2 115.49 71.099 36799 32739 35531 42221 45833 56869 46635 44301 71014 48279 63617 69480 60769 56506 49034 62680 74307 66362 34036 30042 36408 42026 46912 56084 47699 46246 70567 49288 65506 69130 61619 59004 51534 63060 70797 63021 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18081000 18066 2437 17135 34280 27449 27449 1 9606 Homo sapiens 0.035960093658900405 LYQHEINLFK Unmodified 1303.6925 0.69247202 2225 B2R5U7;Q03701 CEBPZ CCAAT/enhancer-binding protein zeta yes no 0 0 0 2 0 1 54.523 54.547 3 0.00045059 16399 20230619_1881_Aki_TMTPro18x_K_F2 104.79 64.363 87075 66303 79655 82778 79131 79434 90515 80508 90305 91028 89214 82490 100850 82570 97788 105990 94932 100430 80424 60856 81536 82213 82474 80633 90592 82495 92005 91181 92077 84192 102390 86430 99381 105800 90896 95427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138040000 18067 2225 17136 34281 27450 27450 1 9606 Homo sapiens 0.052773479771985876 LYQPEYQEVSTEEQREEISGK Unmodified 2541.1871 0.18709167 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;B7Z602 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 1 2.5 0.5 1 1 51.241 51.299 3 5.0335E-45 15017 20230619_1881_Aki_TMTPro18x_K_F2 249.28 226.11 193190 164160 201660 221430 204700 254030 241970 242960 229590 302540 285890 309340 314250 276190 294970 348450 307820 360840 178750 150730 204370 219280 213480 254040 241500 250530 237220 302610 292130 312560 318950 289810 301320 349520 294760 342400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 426560000 18068 874 17137 34282;34283 27451;27452 27451 2 9606 Homo sapiens -0.0218543955666064 LYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 2 Oxidation (M) 3377.4816 0.48163548 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;E9PNE6;B4E1Q1;A8K7Q2;Q96BE0;Q96H53;Q9NZ87;Q9NWW3 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 2 0 4.33 0.471 2 1 61.374 61.393 3;4 0.0070603 18887 20230619_1883_Aki_TMTPro18x_K_F4 46.416 43.588 36937 33415 33198 41221 37334 41892 43247 37223 37520 41753 45780 42572 43107 41902 41984 45658 47040 44737 34148 30646 34151 40983 38601 42206 43077 38501 38890 41979 46453 43176 44063 43419 43011 45766 44942 42510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 225330000 18069 3430 17138 34284;34285;34286 27453;27454 27453 2053;2054 2 9606 Homo sapiens -0.11200606982311001 LYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD Oxidation (M) 3361.4867 0.48672086 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;E9PNE6;B4E1Q1;A8K7Q2;Q96BE0;Q96H53;Q9NZ87;Q9NWW3 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 1 0 5 0 1 62.452 62.499 3 0.013718 19025 20230619_1885_Aki_TMTPro18x_K_F5 44.641 42.735 31546 23805 31329 32264 27710 34391 27848 32721 33965 39356 41741 33349 39485 38085 33320 50149 41407 43234 29154 21869 31793 31912 29114 34563 28297 33703 34588 39236 42294 34348 40112 39744 34533 49763 39552 41130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 329370000 18070 3430 17138 34287 27455 27455 2053;2054 1 9606 Homo sapiens -0.09956303119679433 LYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD Unmodified 3345.4918 0.49180624 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;E9PNE6;B4E1Q1;A8K7Q2;Q96BE0;Q96H53;Q9NZ87;Q9NWW3 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 0 0 5.67 0.471 1 2 63.542 63.589 3;4 0.002039 19764 20230619_1886_Aki_TMTPro18x_K_F6 55.527 52.837 135270 113550 137950 139500 110960 151690 147220 141000 169590 172180 160880 163800 186700 155380 153820 201760 176870 191600 125120 104170 139560 138920 118610 152150 147050 145630 171220 172110 166600 166420 188170 163030 158540 201290 169100 182030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1242800000 18071 3430 17138 34288;34289;34290 27456;27457 27457 2 9606 Homo sapiens -0.08711999257047864 LYQTDPSGTYHAWK Unmodified 1665.7787 0.77872084 1051 Q05DH1;A0A0K0K1K4;O14818;H0Y586;O14818-2;Q4G1B8;B0YJ74;A0A087WYS6;Q8TAA3-2;Q8TAA3-5;Q8TAA3 PSMA7;PSMA8 Proteasome subunit alpha type;Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like yes no 0 0 0 1 0 1 50.282 50.282 3 2.7407E-17 14467 20230619_1880_Aki_TMTPro18x_K_F1 216.39 174.75 122820 108430 134460 123700 109000 155520 136710 133830 311550 133150 109160 100310 136020 106450 114750 113970 132970 119100 113710 99383 135220 124130 116600 154280 141440 138170 298850 134090 122550 103520 137020 110100 118040 114710 126950 113120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155200000 18072 1051 17139 34291 27458 27458 1 9606 Homo sapiens -0.02753736978706911 LYQTPLELK Unmodified 1103.6227 0.62266112 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPW9;A0A8V8TPX4;A0A8V8TRC7;H7C3P6;A0A3B3ITD8;A0A024RCC4 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 1 0 1 58.04 58.04 2 0.0017483 17709 20230619_1880_Aki_TMTPro18x_K_F1 129.63 80.035 52618 48281 56351 55667 53761 65983 60451 56986 62751 66129 62767 59247 72283 55629 65742 66243 62732 67778 48720 44249 56899 55757 56259 65728 60646 59086 63842 66138 64800 60344 73109 58106 66804 66485 60085 64342 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17447000 18073 1852 17140 34292 27459 27459 1 9606 Homo sapiens 0.07499469308595508 LYQVEYAFK Unmodified 1159.5914 0.59136099 1226 G3V295;A0A140VK44;G3V5Z7;P60900;G3V3I1;G3V3U4 PSMA6 Proteasome subunit alpha type;Proteasome subunit alpha type-6 yes no 0 0 0 1.5 0.5 1 1 60.985 60.99 3 0.00024944 18855 20230619_1880_Aki_TMTPro18x_K_F1 120.99 86.456 52644 42938 55764 55951 46220 64211 56370 56734 163850 54513 40914 42607 52913 39754 54600 61423 47642 51164 48701 39417 56261 55539 49368 64089 59445 58412 155580 55131 48266 43717 53728 42270 55147 60778 45675 48692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 256480000 18074 1226 17141 34293;34294 27460 27460 1 9606 Homo sapiens 0.017948962744867458 LYQYPNFAGPHAALANK Unmodified 1873.9475 0.9475175 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;C9IZE1 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 4 0 2 53.551 53.571 3;4 1.8889E-18 15608 20230619_1883_Aki_TMTPro18x_K_F4 179.17 161.47 415020 357670 403620 428700 369520 461250 439830 425860 470810 422070 392330 338520 407110 315040 416420 426390 419760 400320 383800 328000 410670 427560 388830 463030 440390 437450 474720 424330 406630 346920 415300 331850 423510 425200 401460 380570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 620390000 18075 4468 17142 34295;34296 27461;27462 27461 2 9606 Homo sapiens 0.04550164654801847 LYRPGSVAYVSR Unmodified 1366.7357 0.73573382 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 1 6.5 0.5 1 1 42.005 42.09 3 1.6549E-05 10124 20230619_1887_Aki_TMTPro18x_K_F7 132.86 99.667 388890 439570 339810 290080 481010 771640 419660 443460 769170 101510 135780 156370 159310 116560 172010 142610 192240 163560 360080 400990 351400 311910 489620 735920 436890 466160 736310 124290 170230 155220 162700 123000 175610 144160 183540 155230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 407990000 18076 161 17143 34297;34298 27463;27464 27464 2 9606 Homo sapiens 0.0670353775451531 LYSEDELPAEFK Unmodified 1439.682 0.68202649 4755 Q9Y6A4 CFAP20 Cilia- and flagella-associated protein 20 yes yes 0 0 0 3 0 1 59.988 60.017 3 6.8475E-05 18449 20230619_1882_Aki_TMTPro18x_K_F3 115.29 91.436 48418 40558 45627 53698 47107 53507 62323 52546 54192 54536 49578 52944 56768 51334 51898 56191 58337 59313 44756 37235 46667 53132 49201 54090 61675 53839 55507 54962 51439 53752 57507 53259 53237 56556 55760 56299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24799000 18077 4755 17144 34299 27465 27465 1 9606 Homo sapiens -0.020227242585406202 LYSESLAR Unmodified 937.4869 0.48689592 1080;2533 A0A0S2Z3X8;P31150;B4DHX4;Q6IAT1;B4DLV7;P50395;P50395-2;Q5SX87;Q5SX91 GDI1;GDI2 Rab GDP dissociation inhibitor alpha;Rab GDP dissociation inhibitor beta no no 0 0 0 5.5 1.12 1 1 1 1 43.862 43.936 2 2.4168E-10 11183 20230619_1885_Aki_TMTPro18x_K_F5 219.25 71.049 1873700 1582200 1738800 1946800 1869800 2088900 1972900 1953600 2214800 2304900 2521300 2461600 2620500 2023400 2105600 2632900 2784800 2489700 1731900 1451400 1780800 1937800 1935300 2098600 1991200 2014800 2255400 2315100 2575800 2477700 2645900 2134500 2190400 2626500 2655900 2367300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2796800000 18078 1080;2533 17145 34300;34301;34302;34303 27466;27467;27468 27466 3 9606 Homo sapiens 0.01565194517809232 LYSILQGDSPTK Unmodified 1320.6925 0.6925316 3231 O15042-2;O15042;O15042-3 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 0 0 0 1.67 0.471 1 2 60.117 60.122 2;3 1.6076E-05 18515 20230619_1880_Aki_TMTPro18x_K_F1 128.57 110.43 47376 48281 46774 49229 48845 61673 53431 54895 61978 62411 52277 54910 71692 53289 58320 71152 61407 58120 43870 44186 47622 49823 50765 61267 53874 56730 62327 62454 54959 56036 71870 55991 59778 70451 58701 55353 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 322900000 18079 3231 17146 34304;34305;34306 27469;27470 27469 2 9606 Homo sapiens 0.04501303186566474 LYSKDDEPAVK Unmodified 1263.6347 0.63468237 1972 H7C3I5;A6NND8;A6NHJ8;A6NMA8;O95825;H7C0X3 CRYZL1 Quinone oxidoreductase-like protein 1 yes no 0 0 1 5 0 1 45.272 45.35 3 0.035502 11791 20230619_1885_Aki_TMTPro18x_K_F5 56.551 25.723 112550 97829 107390 123730 142260 152120 133000 135960 155030 139710 154560 141860 128590 105160 152750 127310 147520 113570 104070 89758 110140 123160 144750 151300 135320 140080 156630 141070 157420 142690 133170 110850 154460 126910 140960 108140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93840000 18080 1972 17147 34307 27471 27471 1 9606 Homo sapiens 0.01341041261139253 LYSLALHPNAFK Unmodified 1372.7503 0.75032125 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5 0 1 57.043 57.102 3 2.1504E-05 16708 20230619_1885_Aki_TMTPro18x_K_F5 122.55 91.977 165120 161320 169810 167550 200370 220640 199610 214130 223620 83650 69270 47269 56269 44087 125840 48144 50417 44793 152900 147680 172560 169500 205680 218960 201980 215620 219890 90653 77783 49662 61121 45850 122140 48386 48929 42600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115370000 18081 3758 17148 34308 27472 27472 1 9606 Homo sapiens 0.07885609902655233 LYSLFLK Unmodified 882.52149 0.52149051 1360 Q9P2R7;Q9P2R7-2;A0A2R8Y6Y7;Q6N0B1;E5KS55;E5KS60;A0A2R8YDQ9;B4DRV2;B7ZAF6;Q7Z503;B4DY87;A0A0S2Z511;Q5T9Q5;B7Z9S6;Q5T9Q8;A0A0U1RRI1 SUCLA2;DKFZp686D0880 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 6 0 1 63.535 63.583 2 0.072702 19745 20230619_1886_Aki_TMTPro18x_K_F6 75.972 0 73742 64082 71842 71278 70909 89906 90194 90514 99019 69392 56923 53062 55907 53346 62586 61239 62811 52948 68199 58722 73149 71672 74336 89487 90063 91831 98623 70818 60345 54637 57473 55414 63525 60965 60026 50414 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89001000 18082 1360 17149 34309 27473 27473 1 9606 Homo sapiens 0.07553062396573296 LYSPSQIGAFVLMK Unmodified 1552.8323 0.83233632 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z1V7;H0Y8K0;Q2F839;A0A3B3ITI4 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 5.5 0.5 1 1 64.488 64.532 3 8.0433E-09 19900 20230619_1885_Aki_TMTPro18x_K_F5 157.52 137.21 70021 63722 71987 66880 65854 82174 69857 79868 94898 42166 32597 30139 33243 26942 60467 37889 34860 28933 64806 58354 72846 67533 69111 81870 70982 80704 92626 44363 36447 31073 35202 28480 59467 37474 33560 27597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155670000 18083 1488 17150 34310;34311 27474 27474 1 9606 Homo sapiens 0.07803344199419371 LYSPSQIGAFVLMK Oxidation (M) 1568.8273 0.82725094 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z1V7;H0Y8K0;Q2F839;A0A3B3ITI4 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 1 0 5.67 0.471 1 2 63.515 63.562 2;3 7.3627E-07 19744 20230619_1886_Aki_TMTPro18x_K_F6 126.1 111.12 575380 543370 569190 581810 680270 669300 689220 686480 795330 297400 291330 211820 221540 190450 467410 284340 258580 199040 532500 497620 580400 585890 697490 670870 697300 689700 782540 319650 319580 218890 240100 202060 458420 280070 249010 190170 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 806850000 18084 1488 17150 34312;34313;34314 27475;27476 27476 996 2 9606 Homo sapiens 0.06559040336787803 LYSQFLGK Unmodified 954.51747 0.51746776 1487 P28161;A0A384P5E9;P28161-2;F6XZQ7;Q0D2I8;E9PHN6;A8HT81;E9PHN7;E9PLF1;E9PGV1 GSTM2 Glutathione S-transferase Mu 2 yes no 0 0 0 4 0 1 58.879 58.881 2 0.0093226 17863 20230619_1883_Aki_TMTPro18x_K_F4 111.74 91.952 145510 121660 141820 178520 158930 182360 174920 161490 199920 175760 190330 239940 174390 187490 224550 218940 228380 251090 134540 111820 144870 175530 164230 183560 176160 166930 201790 178860 195490 238750 181180 196610 227650 221330 218640 238060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253530000 18085 1487 17151 34315 27477 27477 1 9606 Homo sapiens 0.0383897290286086 LYSSEESRPYTNK Unmodified 1572.742 0.74200098 610 A0A2R8YEB7;A0A2R8Y644;Q9BVE2;A0A2R8YD28;A0A2R8YF61;A0A2R8Y7W5;A0A2R8Y4Z0;A0A024RA66;A0A024RA85;Q14004-2;Q14004 CDK13;CDC2L5 Cyclin-dependent kinase 13 yes no 0 0 1 7 0 1 41.171 41.242 3 0.00018413 9761 20230619_1887_Aki_TMTPro18x_K_F7 96.82 86.898 26456 22415 26862 29961 31616 35690 29056 28529 29130 38737 42699 37409 50547 31014 34528 43001 45780 39082 24471 20579 27343 29698 32395 35487 29465 29913 30263 38546 43459 37844 50496 32888 36056 42774 43647 37187 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27467000 18086 610 17152 34316 27478 27478 1 9606 Homo sapiens -0.021460335952951937 LYTDDEDDIYK Unmodified 1388.5984 0.59835644 3446 P13521 SCG2 Secretogranin-2;Secretoneurin;Manserin yes yes 0 0 0 1 0 1 61.037 61.037 3 0.0019265 18885 20230619_1880_Aki_TMTPro18x_K_F1 80.763 67.996 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18087 3446 17153 34317 27479 27479 1 9606 Homo sapiens -0.08039880426235868 LYTEGYQVPPGATYTAIEAPK Unmodified 2268.1314 0.13141469 1669 O75306;A0A7I2V4X8;B7Z792;O75306-2;A0A7I2YQG7;A0A7I2V596;Q53HG2;A0A7I2V4G5;A0A7I2YQD8 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 7 0 1 60.553 60.596 3 0.00015689 18027 20230619_1887_Aki_TMTPro18x_K_F7 72.585 51.935 29678 24713 26860 29464 28302 35009 28831 27255 31089 30728 29516 27708 32047 28223 31770 34544 32909 35813 27424 22665 27560 29432 29336 34797 29112 28478 31496 30791 30464 28298 32622 29433 32390 34674 31496 33991 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70647000 18088 1669 17154 34318 27480 27480 1 9606 Homo sapiens 0.048074237844048184 LYTGPGLAIHCMQVHK Unmodified 1823.9175 0.9174797 3148 J3QRS9;Q59G94;X6R4W8;O43670-2;O43670;O43670-4 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 yes no 0 0 0 4.5 0.5 1 1 50.258 50.312 4 1.7492E-11 14123 20230619_1883_Aki_TMTPro18x_K_F4 165.49 141.45 241660 190390 211550 236110 222350 302370 212500 229610 282710 247550 248670 248670 261730 219500 279960 277480 253670 251650 223170 174710 217750 235470 230510 298910 217080 240020 282660 249410 257370 251460 267530 230430 282890 276500 242950 239300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 264990000 18089 3148 17155 34319;34320 27481 27481 1 9606 Homo sapiens 0.03847766393573693 LYTLQDK Unmodified 879.47018 0.47018322 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 7 1 1 1 50.339 50.416 2 0.0054214 13663 20230619_1888_Aki_TMTPro18x_K_F8 140.98 78.142 469370 374210 400220 399910 340130 382710 386810 374020 439330 570200 631550 589650 563680 510900 471710 853590 308780 573820 433410 342900 411350 401770 359600 388340 389240 388050 452600 566110 635490 595800 572920 547060 474630 835440 298850 547010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 526540000 18090 3606 17156 34321;34322 27482;27483 27483 2 9606 Homo sapiens 0.02562693631853108 LYTLVLTDPDAPSR Unmodified 1559.8195 0.81952302 2861 D9IAI1;P30086;A0A0K0K1J6;B4DRT4 HEL-S-34;PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 6.5 1.12 1 1 1 1 62.214 62.255 3 1.3548E-16 19104 20230619_1886_Aki_TMTPro18x_K_F6 164.68 141.77 450460 297490 359660 447610 422570 494260 426400 446220 527330 470990 497090 483600 457660 409070 451370 517680 479360 479130 415330 273790 374400 439980 434670 494900 432850 459830 530160 475180 509630 487980 468220 430010 461020 516150 458370 455490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2110099999.9999998 18091 2861 17157 34323;34324;34325;34326 27484;27485 27484 2 9606 Homo sapiens 0.062006043408928235 LYTLVLTDPDAPSRK Unmodified 1687.9145 0.91448604 2861 D9IAI1;P30086;A0A0K0K1J6;B4DRT4 HEL-S-34;PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 1 1.5 0.5 1 1 57.702 57.709 4 9.2725E-08 17681 20230619_1881_Aki_TMTPro18x_K_F2 135.37 109.25 24954 18294 23592 21947 25128 33729 21542 23223 46268 17920 26532 33691 28245 33381 25953 48623 49210 53792 23049 16787 24094 22015 25990 32954 22683 24310 44842 18957 28263 33525 28777 35202 27842 48824 46891 51021 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313810000 18092 2861 17158 34327;34328 27486 27486 1 9606 Homo sapiens 0.09804537812055969 LYTLVTYVPVTTFK Unmodified 1643.9174 0.91744615 2204 B2R4C1;P62899;H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899-2;Q76N53 RPL31 60S ribosomal protein L31 yes no 0 0 0 6.5 0.5 1 1 64.793 64.829 2 4.4562E-18 20266 20230619_1886_Aki_TMTPro18x_K_F6 218.52 175.24 105630 88513 102820 102300 95823 108060 112020 112510 112210 131740 115920 118860 133390 108650 116750 134500 134010 135470 97670 81150 104580 102300 100520 108950 112060 115130 114590 131660 119550 120880 134770 113830 120060 134740 128060 128650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41743000 18093 2204 17159 34329;34330 27487 27487 1 9606 Homo sapiens 0.12124412936850604 LYTTMPVAK Unmodified 1022.5471 0.54705333 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;B0QY90;B3KNG0;Q7Z5X3;Q8N7H0 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 0 2.5 0.5 1 1 52.849 52.895 3 0.0042479 15477 20230619_1882_Aki_TMTPro18x_K_F3 63.419 34.463 43835 37435 46296 41694 43764 59593 51230 57949 60185 52612 53093 57049 62833 47582 53101 64524 57060 57256 40563 34307 46776 42018 45950 58836 51519 59128 60514 53597 55256 57410 63321 50302 54449 64130 54558 54459 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176330000 18094 2176 17160 34331;34332 27488 27488 1 9606 Homo sapiens 0.036681688566886805 LYTVVPR Unmodified 846.49634 0.49633839 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 3 0.816 1 1 1 48.066 48.13 2 0.0077445 13305 20230619_1882_Aki_TMTPro18x_K_F3 122.79 94.278 412020 330280 358040 396590 311980 355540 404870 393940 413820 480250 528550 556820 548070 444020 481660 580310 556980 568460 380530 302970 367770 394620 330340 363570 403270 402260 425820 482800 537920 558000 555440 468960 495660 580020 532270 540010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 578350000 18095 1736 17161 34333;34334;34335 27489 27489 1 9606 Homo sapiens 0.06695007593987157 LYTWVEWVK Unmodified 1222.6386 0.63864553 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;A0A6I8PIP7;Q9P2J5-3;Q9HAM7;Q9NPU8;Q9NVC0;Q9NVP8 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 3 0 1 64.641 64.673 2 0.00083402 20406 20230619_1882_Aki_TMTPro18x_K_F3 135.83 78.232 30686 20205 33296 33828 22318 34002 29046 27914 35184 35424 33148 37759 44045 39412 44948 42973 42823 46921 28360 18621 33452 33023 24307 34189 29104 29156 35433 35487 34630 38273 44662 40788 45562 43356 41022 44509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35473000 18096 1603 17162 34336 27490 27490 1 9606 Homo sapiens 0.0362317554549918 LYVELHR Unmodified 928.51305 0.51305109 318 B4E0P8;A0A087WTZ5;E9PJ81;E9PRQ7;A0A024R598;A0A024R539;Q04323;Q04323-2 UBXN1;LOC51035 UBX domain-containing protein 1 yes no 0 0 0 7.5 0.5 1 1 43.032 43.077 3 1.2822E-05 10505 20230619_1887_Aki_TMTPro18x_K_F7 181.2 73.453 62369 42251 56017 65115 60646 79002 69473 63322 84659 72924 72422 79177 93723 70541 67366 82653 77592 89550 57560 38891 57578 64006 62995 78412 69976 66053 84893 73423 75833 79785 93670 73744 69616 83204 74223 84939 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136890000 18097 318 17163 34337;34338 27491;27492 27491 2 9606 Homo sapiens 0.04593508479956654 LYVHEAVK Unmodified 957.52837 0.5283668 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0 PLEC;PLEC1 Plectin yes no 0 0 0 7.5 0.5 1 1 41.657 41.691 3 0.00047891 9920 20230619_1887_Aki_TMTPro18x_K_F7 138.54 80.955 75039 61942 70378 77941 124780 102450 111570 111980 137310 69023 75329 54934 63276 59449 83109 71161 70592 43776 69355 56839 72720 77726 124710 102030 113950 112550 135740 71758 79581 56695 65964 61735 83397 69851 67478 41967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70896000 18098 3921 17164 34339;34340 27493 27493 1 9606 Homo sapiens 0.04790375277138992 LYVHTLTITSK Unmodified 1274.7234 0.72343779 1310 A0A1W2PR73;Q969N2;A0A1W2PPR6;A0A1W2PNP0;A0A1W2PPC3;A0A1W2PP57;Q969N2-5;Q969N2-4;A0A1W2PPS0;A0A1W2PP53;Q969N2-2;B7ZAP3;A0A1W2PQ52;B7Z1F1;B7Z1N3;B7Z3L1;B7Z4T7;A0A1W2PPQ7;A0A1W2PSC5;A0A1W2PQY1;A0A1W2PPK4 PIGT GPI transamidase component PIG-T yes no 0 0 0 4 0 1 50.588 50.619 3 0.010924 14266 20230619_1883_Aki_TMTPro18x_K_F4 71.555 39.487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18099 1310 17165 34341 27494 27494 1 9606 Homo sapiens 0.09706501291475433 LYVIGGNHFR Unmodified 1174.6247 0.6247268 1000 Q96HC9;Q9NW71;B7Z4L9;A0A0C4DG80;Q9P2N7-2;Q9P2N7-3;Q9P2N7-4;Q9P2N7;Q9P2N7-5;Q9H8J3;Q7Z350;Q5JC44;Q58EZ4;Q9P2J3 KLHL13;DKFZp686L0695;KLHL9 Kelch-like protein 13;Kelch-like protein 9 yes no 0 0 0 5 0 1 46.67 46.747 3 4.8656E-06 12360 20230619_1885_Aki_TMTPro18x_K_F5 161.92 116.2 19316 15039 16263 17116 16738 20597 16587 18319 23438 19798 17876 16956 21409 18151 18158 19983 18883 17696 17832 13790 16787 17163 17383 20509 16948 18903 23269 19857 18748 17386 21585 18781 18571 19922 18052 16837 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59703000 18100 1000 17166 34342 27495 27495 1 9606 Homo sapiens 0.0443994283707525 LYVIGTGER Unmodified 1006.5447 0.54474515 4394 Q96RS6;Q96RS6-3;Q96RS6-2;A0A7I2V457 NUDCD1 NudC domain-containing protein 1 yes no 0 0 0 7 0.816 1 1 1 49.355 49.433 2 0.0001408 13302 20230619_1887_Aki_TMTPro18x_K_F7 148.99 107.01 394100 352590 373040 389000 348920 383450 392500 388420 430790 464630 462100 477060 495300 415580 439120 530120 528670 506050 364470 323050 380420 389960 365550 388440 394550 398570 438200 465770 474190 481680 501820 436750 452950 529270 504810 480990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 560590000 18101 4394 17167 34343;34344;34345 27496;27497 27496 2 9606 Homo sapiens 0.0417345644324314 LYVNSEK Unmodified 851.43888 0.43888309 495 Q14C86-6;Q14C86;Q14C86-2;Q14C86-5;Q14C86-4;A0A024R8A2;A0A024R862;F8W9S7;Q14C86-3;A0A024R875;B4DK42;C9IZ08;B4DGD8;B0QZ65;C9IZX9 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 0 0 0 7 0 1 44.335 44.418 2 0.0050265 11081 20230619_1887_Aki_TMTPro18x_K_F7 114.78 57.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18102 495 17168 34346 27498 27498 1 9606 Homo sapiens 0.007221205977657519 LYVYNTDTDNCR Unmodified 1532.6566 0.6565568 2464 B4DQF1;B4DEI4;B4DNR1;Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 GORASP2 Golgi reassembly-stacking protein 2 yes no 0 0 0 4 0.707 1 2 1 46.946 47.006 2;3 4.433599999999999E-40 12598 20230619_1883_Aki_TMTPro18x_K_F4 296.25 287.04 226030 155390 190390 230740 213160 277810 223980 227610 296920 299150 311780 342920 351400 294970 253050 322420 375430 385300 208520 142960 197000 227260 220460 276010 227470 237910 299050 299900 320990 344350 352790 307410 266180 326870 358100 365250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 362320000 18103 2464 17169 34347;34348;34349;34350 27499;27500 27499 2 9606 Homo sapiens -0.08846522052590444 LYWDDLKR Unmodified 1107.5713 0.57129425 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TND0;A0A8V8TLK4 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 1 1 0 1 52.762 52.762 3 0.0012452 15473 20230619_1880_Aki_TMTPro18x_K_F1 118.32 77.893 278760 226180 271500 262950 193140 286740 196940 192900 244190 240530 200860 160700 210420 143510 200440 177850 157910 122050 257700 207400 275170 262850 207630 285880 200030 204900 244520 238220 208270 166170 213670 150570 201510 175170 151250 116650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207750000 18104 1817 17170 34351 27501 27501 1 9606 Homo sapiens 0.021811453345662812 LYYDTDYGSK Unmodified 1223.5346 0.53463397 4579 Q9NQZ2 UTP3 Something about silencing protein 10 yes yes 0 0 0 5 0 2 51.399 51.474 2;3 1.0649E-06 14378 20230619_1885_Aki_TMTPro18x_K_F5 155.42 131.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18105 4579 17171 34352;34353 27502;27503 27502 2 9606 Homo sapiens -0.06819196072660816 LYYEGLQDK Unmodified 1127.5499 0.5498901 1103 O14964;A0A7I2V3F9;A0A7I2V5A3;A0A7I2V3Z1;A0A7I2V6E0;A0A7I2V2K2;A0A7I2V5A2;A0A7I2V3I8;A0A7I2V2D8;A0A7I2V2W5;A0A7I2V2R9;A0A7I2V3J3;A0A0S2Z4R4;A0A7I2V637;B4E1E2;A0A0S2Z4Q4;O14964-2;A0A7I2YQD1;A0A7I2V307;I3L1E3 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 4.5 0.5 1 1 53.29 53.335 3 0.054446 15209 20230619_1885_Aki_TMTPro18x_K_F5 46.39 15.316 62987 44265 57180 69361 56870 63458 69733 64809 63899 66775 65408 68968 83387 66855 67442 86495 79360 81832 58146 40747 58644 67863 59429 64617 69383 66206 65529 67439 67853 69876 83759 70084 69623 86284 75833 77765 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69060000 18106 1103 17172 34354;34355 27504 27504 1 9606 Homo sapiens -0.008782844848155946 LYYVCTAPHCGHR Unmodified 1632.729 0.72895065 3559 P36954 POLR2I DNA-directed RNA polymerase II subunit RPB9 yes yes 0 0 0 3 0 1 37.627 37.681 4 6.6036E-06 8661 20230619_1882_Aki_TMTPro18x_K_F3 102.4 100.75 21804 18849 20361 22204 30809 24005 22335 27413 27073 18603 26088 26259 21524 18040 28413 19273 27061 22808 20158 17282 20955 22179 30879 24242 23172 27523 27243 19506 26627 26036 22437 18944 28643 19577 25876 21641 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24485000 18107 3559 17173 34356 27505 27505 1 9606 Homo sapiens -0.06210466460038333 MAAADSVQQR Unmodified 1075.508 0.50804206 1107 A0A994J4Y3;A0A0S2Z4W1;A9Z1X7;A0A994J7H1;B7Z7U0;A0A994J7V4;A0A0S2Z4Z6;Q8IYB3-2;Q8IYB3;M0R088 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 0 0 0 4 0 1 34.828 34.878 2 1.1889E-13 7481 20230619_1883_Aki_TMTPro18x_K_F4 229.33 159.73 44339 28442 55939 52839 70383 83584 52065 68608 67486 54618 69334 78026 66833 59614 65155 38848 80815 68345 41032 26255 56055 51714 71519 81772 54102 70687 67920 56675 70999 77441 68237 61018 66988 41123 77086 64648 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36176000 18108 1107 17174 34357 27506 27506 1 9606 Homo sapiens -0.02669163444966216 MAAEAAGGK Acetyl (Protein N-term);Oxidation (M) 862.38547 0.38546731 4113 Q6NX51;Q96A65;Q8TAR2;Q96A65-2 EXOC4 Exocyst complex component 4 no no 1 1 0 7 0 1 60.237 60.283 2 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18324000 18109 4113 17175 34358 0 9606 Homo sapiens -0.05123000176388359 MAAGDIGELLVPHMPTIR Oxidation (M) 1935.991 0.99103858 975 A0A7P0TAP9;A0A0A6YZ17;Q92995;A0A7P0TB69;A0A7P0TAN6;A0A7P0Z4R3;A0A7P0Z4C0;A0A7P0TB92;A0A7P0TAJ9 USP13 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 13 yes no 0 1 0 8 0 1 61.698 61.727 3 0.0079358 18410 20230619_1888_Aki_TMTPro18x_K_F8 60.334 48.643 40743 33801 40178 40703 35737 42824 42296 43673 49577 41671 42129 40129 45387 38217 42371 45192 45974 49909 37673 31003 40801 40578 37683 43156 42502 44502 49778 42190 43707 40762 46079 39869 43354 45556 43980 47339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 346450000 18110 975 17176 34359 27507 27507 545 1 9606 Homo sapiens 0.06048270045380377 MAAHTMGNATVGR Oxidation (M) 1331.6074 0.60743853 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 1 0 7.5 0.5 1 1 28.592 28.617 3 3.2376E-05 5160 20230619_1888_Aki_TMTPro18x_K_F8 113.69 101.14 9650.1 5643.9 7061.5 8125.7 9628.2 11550 11017 12381 17486 8885.7 10976 8206.2 10537 8241.5 9090.5 9979.3 12545 9174.2 8887.4 5194.6 7437 8044.8 9861.2 11430 11219 12487 17153 9164.6 11525 8380.5 10701 8595.4 9463.2 9953.5 11947 8734.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15633000 18111 3578 17177 34360;34361 27508;27509 27509 2247;2248 2 9606 Homo sapiens -0.04510088822553371 MAALEAK Unmodified 732.38401 0.38401075 2662 B5BUB5;P05455;E7ERC4;E9PFL9;Q2F832 SSB Lupus La protein yes no 0 0 0 6.5 0.5 1 1 46.929 47.015 2 0.015923 12610 20230619_1886_Aki_TMTPro18x_K_F6 110.63 38.684 557400 365010 521560 608920 673090 696530 633100 638040 738930 656530 832800 779510 782180 645360 687900 580730 960970 819940 514490 336390 535550 595540 685910 696100 643990 656430 750110 666410 847320 781110 795480 667150 715520 598410 915830 776760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 317650000 18112 2662 17178 34362;34363 27510;27511 27510 2 9606 Homo sapiens 0.0071141052549137385 MAAPIDR Oxidation (M) 788.38507 0.38507338 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 1 0 2.5 1.12 1 1 1 1 30.999 31.053 2 0.066756 6065 20230619_1881_Aki_TMTPro18x_K_F2 71.715 13.547 80328 55800 65715 74306 114890 105850 95822 101180 113270 86840 101000 93474 92396 82797 87622 80983 111390 89137 74095 51270 68743 73913 114830 104560 98226 103250 113850 88781 103780 94250 94403 85655 90446 81905 106190 84658 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 232980000 18113 3194;3631 17179 34364;34365;34366;34367 27512 27512 1859 1 9606 Homo sapiens -0.017583751056008623 MAATFIGNSTAIQELFK Unmodified 1840.9393 0.93932058 3381 P04350;B4DJ43;B4DE77;B4DFH6 TUBB4A Tubulin beta-4A chain yes no 0 0 0 3.5 0.5 1 1 64.977 64.998 3 0.00075408 20418 20230619_1883_Aki_TMTPro18x_K_F4 72.315 57.87 9516.5 8496 9557 7023.1 5477.2 7241.1 7186.6 7710.3 8910.6 11059 14183 11335 13306 12238 10014 12958 14684 16075 8805 7766.6 9627.7 7232.7 6070.3 7323 7214.1 7931.5 9190.1 11005 14240 11538 13459 12634 10515 13174 14014 15230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29942000 18114 3381 17180 34368;34369 27513 27513 1 9606 Homo sapiens 0.05248849623171736 MACGAEFSMIMDCK 2 Oxidation (M) 1681.6278 0.6278409 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 2 0 5.5 0.5 2 2 54.116 54.189 3 3.7904E-05 16087 20230619_1886_Aki_TMTPro18x_K_F6 98.942 94.394 140370 124130 138230 149410 147070 155010 148840 143640 160700 170720 187000 174540 191840 153620 171730 212070 190220 190210 129840 113830 140780 148890 152050 156110 150380 148300 164150 171190 190750 176440 194620 162250 176220 210830 181820 180890 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 119430000 18115 617 17181 34370;34371;34372;34373 27514;27515;27516;27517 27517 351;352;353 4 9606 Homo sapiens -0.1857079033154605 MACGAEFSMIMDCK Oxidation (M) 1665.6329 0.63292628 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 1 0 6.5 0.5 1 1 59.018 59.075 3 0.00094283 17692 20230619_1886_Aki_TMTPro18x_K_F6 77.078 67.914 93199 73647 91801 92572 76761 94346 94256 95074 101310 110530 105510 107180 115210 98557 103640 119560 105320 111900 86149 67591 93159 91973 81466 95264 94285 97492 103040 110750 108500 108670 116730 103050 105780 119340 100800 106340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199660000 18116 617 17181 34374;34375 27518;27519 27518 351;352;353 2 9606 Homo sapiens -0.17326486468959956 MACGAEFSMIMDCK Unmodified 1649.638 0.63801166 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 6.5 0.5 1 1 61.758 61.805 3 2.2816E-05 18598 20230619_1887_Aki_TMTPro18x_K_F7 111.79 107.95 149530 108910 142070 121150 97212 125850 152200 116020 128090 273870 239040 313110 317180 270440 197960 285440 331660 379820 138120 99866 144180 121500 106070 126710 149590 123530 136950 269260 243840 314180 315650 281310 211250 291590 316370 359580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 339480000 18117 617 17181 34376;34377 27520 27520 1 9606 Homo sapiens -0.16082182606328388 MACGLGGK Unmodified 792.36223 0.36222945 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6 IPO5;RANBP5 Importin-5 yes no 0 0 0 1 0 1 43.378 43.378 2 0.0091031 11601 20230619_1880_Aki_TMTPro18x_K_F1 114.54 77.952 52967 31799 62655 63294 63266 69727 57802 66650 73492 74073 86462 88031 87727 78618 69220 57555 105210 92577 48970 29395 62845 61366 65519 69896 59145 68483 74506 74887 88135 88343 88667 80328 72621 60187 100230 87606 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22291000 18118 782 17182 34378 27521 27521 1 9606 Homo sapiens -0.042257174947167186 MADFHKEEMDDQDK 2 Oxidation (M) 1769.6873 0.68726458 1525 A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 0 2 1 2.5 0.5 1 1 37.569 37.626 4 0.0090615 8759 20230619_1881_Aki_TMTPro18x_K_F2 64.394 55.347 17289 10919 16618 19848 22609 21748 19570 20735 26374 20561 24643 31059 26250 21322 20342 26367 30296 34352 15959 10077 17042 19316 22916 21818 20118 21253 26399 21113 25470 30707 26464 22590 21373 26840 28919 32529 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34585000 18119 1525 17183 34379;34380 27522 27522 1009;1010 1 9606 Homo sapiens -0.1667915652051306 MADFWLTEK Oxidation (M) 1155.527 0.52704617 4587 Q9NRX2 MRPL17 39S ribosomal protein L17, mitochondrial yes yes 0 1 0 6 0 1 58.592 58.657 2 0.013133 17588 20230619_1886_Aki_TMTPro18x_K_F6 72.643 42.073 35981 27135 32106 34448 39644 43573 42855 40858 45171 41178 44606 46213 44837 34790 46645 49054 42219 49116 33225 24911 33069 34304 40671 43302 43084 41936 45855 41751 45827 46310 45810 37030 47173 49060 40486 46625 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27374000 18120 4587 17184 34381 27523 27523 2819 1 9606 Homo sapiens -0.04449626873952184 MADHWETAPR Oxidation (M) 1228.5295 0.52950579 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1;F8VU51;H0YI23;B4DMQ9;U3KQT9 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 1 0 2.5 0.5 1 1 33.264 33.328 3 0.0016147 6878 20230619_1882_Aki_TMTPro18x_K_F3 84.658 69.119 20500 22607 24108 23789 38933 36161 34892 37553 31008 22749 28722 29149 25764 23960 34244 20279 27441 28143 19025 20691 24409 24105 39076 35678 35293 37849 31694 23979 29476 29125 26797 24690 34219 20927 26326 26644 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38897000 18121 3610 17185 34382;34383 27524 27524 2293 1 9606 Homo sapiens -0.07561778416265952 MADLHAVPR Oxidation (M) 1024.5124 0.51239916 1217 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;B4DLZ4 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 1 0 5 0.816 1 1 1 33.49 33.55 3 0.00047454 6981 20230619_1885_Aki_TMTPro18x_K_F5 108.81 83.864 114440 86071 109610 140890 151090 130790 111540 117740 144590 143020 135550 116840 148630 115470 112680 165800 130230 118260 105730 79253 112490 137510 152390 132760 115820 121880 145200 142430 139900 119880 149510 121820 116470 162990 124350 112880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 165850000 18122 1217 17186 34384;34385;34386 27525;27526 27526 754 2 9606 Homo sapiens 0.0011234576857077627 MADLHAVPR Unmodified 1008.5175 0.51748454 1217 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;B4DLZ4 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 6.5 0.5 1 1 39.21 39.286 3 0.00020939 9230 20230619_1886_Aki_TMTPro18x_K_F6 125.04 94.69 179710 134950 165260 218020 203800 206950 178130 163910 192340 251370 207620 216880 274140 187280 165940 275900 242060 203950 165970 124240 169920 212960 207850 209110 181560 172880 196250 248250 215140 220690 272280 198980 175440 271480 230600 194610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 254430000 18123 1217 17186 34387;34388 27527;27528 27527 2 9606 Homo sapiens 0.013566496312023446 MADLSELLK Oxidation (M) 1034.5318 0.5317972 3103 I3L159;I3L1F5;Q6IBP2;Q6FHB5;Q53HF1;P30519;B3KSE0;A0A087WT44;P30519-2;I3L276;I3L4P8;A0A1B0GXH0;I3L463 HMOX2 Heme oxygenase 2 yes no 0 1 0 5.5 0.5 1 1 58.812 58.872 3 0.028645 17679 20230619_1886_Aki_TMTPro18x_K_F6 53.751 24.602 68236 58181 71968 75052 60767 69298 79116 69617 68434 83762 77297 75984 76960 60936 80426 80517 80210 88217 63141 53396 72655 74335 64458 70517 78391 71520 70750 83612 78899 76967 78684 64437 81713 81023 76802 83678 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15870000 18124 3103 17187 34389;34390 27529 27529 1801 1 9606 Homo sapiens 0.015912572688421278 MAEEGGGGQGDGGSSLASGSTQR Oxidation (M) 2110.8822 0.88215265 2640 B4E0H5;Q9NVF7-2;Q9NVF7 FBXO28 F-box only protein 28 yes no 0 1 0 1 0 1 33.25 33.25 3 0.058262 7275 20230619_1880_Aki_TMTPro18x_K_F1 41.911 39.449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18125 2640 17188 34391 27530 27530 1592 1 9606 Homo sapiens -0.12885314181812646 MAEIGEHVAPSEAANSLEQAQAAAER Unmodified 2679.2559 0.25585671 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 3 0.816 1 1 1 53.752 53.785 3 5.3990999999999997E-39 15866 20230619_1882_Aki_TMTPro18x_K_F3 211.68 202.92 19022 15852 18257 18149 17395 20498 22390 19102 22346 23832 22992 22980 27520 21573 23465 27151 25234 27360 17586 14532 18601 18177 18276 20519 22279 19745 22807 23807 23759 23324 27738 22606 24051 27195 24142 25977 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 259070000 18126 2980 17189 34392;34393;34394 27531 27531 1 9606 Homo sapiens -0.016600985285094794 MAENLGFVGPLK Unmodified 1274.6693 0.66929373 4365 Q96I99;Q3ZCW5;E9PDQ8;Q96I99-2;B7Z2D5;Q9Y436;H0Y852 SUCLG2;DKFZp586M2023 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 2 0 1 61.426 61.437 3 0.0015055 19220 20230619_1881_Aki_TMTPro18x_K_F2 91.914 72.302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18127 4365 17190 34395 27532 27532 1 9606 Homo sapiens 0.04294585868251488 MAENLGFVGPLK Oxidation (M) 1290.6642 0.66420836 4365 Q96I99;Q3ZCW5;E9PDQ8;Q96I99-2;B7Z2D5;Q9Y436;H0Y852 SUCLG2;DKFZp586M2023 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 1 0 8 0 1 56.995 57.046 3 0.033956 16561 20230619_1888_Aki_TMTPro18x_K_F8 46.481 20.097 107270 93678 100400 114130 112650 123670 113620 116310 145570 112380 115960 117920 128330 103640 116950 134340 107160 128940 99174 85916 102820 113690 116130 124170 115480 119230 145240 114030 120930 119020 130000 109020 118690 134150 102780 122440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78044000 18128 4365 17190 34396 27533 27533 2749 1 9606 Homo sapiens 0.030502820056199198 MAEPFTK Oxidation (M) 838.38949 0.38949006 2082 A8K5Y7;Q9HAV4;B3KPQ5;B3KNC6;Q9H8N6 XPO5 Exportin-5 yes no 0 1 0 6 0 1 42.98 43.073 3 0.068773 10839 20230619_1886_Aki_TMTPro18x_K_F6 44.447 25.716 34240 28914 31927 35531 38073 35917 40151 39347 41605 41704 46001 44683 43298 37991 42419 44346 47450 52806 31650 26524 32735 35349 39066 36387 40408 40027 42480 42102 46869 45006 44244 39754 43440 44928 45388 50046 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29436000 18129 2082 17191 34397 27534 27534 1302 1 9606 Homo sapiens -0.03616910682683283 MAEPFTK Unmodified 822.39458 0.39457544 2082 A8K5Y7;Q9HAV4;B3KPQ5;B3KNC6;Q9H8N6 XPO5 Exportin-5 yes no 0 0 0 7 0 1 48.634 48.721 2 0.011098 13014 20230619_1887_Aki_TMTPro18x_K_F7 125.01 58.014 302630 242960 276840 288140 285110 326030 303740 305610 391470 369180 368350 375720 419760 331880 358240 434670 576480 421360 279610 222840 283560 287820 296290 326360 307910 315300 392990 369980 381260 379720 423990 349330 377740 434180 548380 400920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78311000 18130 2082 17191 34398 27535;27536 27536 2 9606 Homo sapiens -0.02372606820074452 MAFPLLDMVDLER Unmodified 1548.768 0.7680215 4466 Q9BXW7-2;Q9BXW7 CECR5 Cat eye syndrome critical region protein 5 yes no 0 0 0 7 0 1 66.198 66.222 2 1.5216E-35 20584 20230619_1887_Aki_TMTPro18x_K_F7 268.73 221.16 53225 40034 50417 48605 33921 51561 49750 44650 54829 58029 52063 63868 65085 57758 64633 70773 66499 68393 49170 36737 51206 48430 37084 51727 49412 46476 55494 58114 54218 64332 66013 60449 65867 70764 63621 64979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77601000 18131 4466 17192 34399 27537 27537 1 9606 Homo sapiens 0.015588210509804412 MAFRPGVVDLPEENR Oxidation (M) 1744.8567 0.85665359 577 A0A024R9J0;O60216;A0A8I5KWV3;E5RJW1;E5RJK5;E5RFV8;E5RIN7 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 1 1 4.5 0.5 1 1 46.627 46.687 3 0.011204 12357 20230619_1885_Aki_TMTPro18x_K_F5 67.846 56.406 65274 52957 63853 69268 62916 71260 70699 72211 78840 79229 83646 75986 79754 72626 74481 93426 82323 86260 60343 48617 65004 68635 65654 71919 71107 73891 80052 79597 85372 77236 81307 76099 76373 93094 78718 81992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103670000 18132 577 17193 34400;34401 27538 27538 339 1 9606 Homo sapiens 0.014019526150150341 MAFRPGVVDLPEENR Unmodified 1728.8617 0.86173896 577 A0A024R9J0;O60216;A0A8I5KWV3;E5RJW1;E5RJK5;E5RFV8;E5RIN7 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 0 1 6 0.816 1 1 1 51.018 51.095 3 1.6093E-18 14379 20230619_1886_Aki_TMTPro18x_K_F6 153.03 140.22 112470 89020 108940 118820 87479 123360 113030 115330 130610 144060 136710 124250 142760 125500 118580 138580 140560 153220 103950 81751 110730 117580 93486 124130 113080 119140 132390 143450 140140 127090 144400 130140 122330 139810 134360 145320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195780000 18133 577 17193 34402;34403;34404 27539 27539 1 9606 Homo sapiens 0.026462564776466024 MAGAIPLVTAGSQK Unmodified 1342.7279 0.72787125 3992 Q53FA7;B4DMQ7;H7BZH6;Q53FA7-2 TP53I3 Quinone oxidoreductase PIG3 yes no 0 0 0 3 0 1 56.223 56.26 3 5.6854E-07 16900 20230619_1882_Aki_TMTPro18x_K_F3 134.18 116.97 45405 38788 42025 46388 46653 60136 50893 51411 68473 53861 52662 54546 53796 46649 56224 55795 50740 54397 41971 35571 43081 46396 48313 59544 51596 53179 68095 54363 54847 55068 54989 48858 56827 55852 48626 51668 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40187000 18134 3992 17194 34405 27540 27540 1 9606 Homo sapiens 0.07021642442737175 MAGATPVFIPLR Unmodified 1271.706 0.70601359 2607 B4DW13;Q6YP21-3;Q6YP21;A0A0A0MRN7 hCG_23341;CCBL2 Kynurenine--oxoglutarate transaminase 3 yes no 0 0 0 5 0 1 60.18 60.232 2 0.00062729 17969 20230619_1885_Aki_TMTPro18x_K_F5 121.73 82.897 61525 57900 57427 53097 51772 74907 60440 64848 78725 36128 37099 31839 30143 32455 50555 38986 40950 35369 56913 52958 58587 54356 54639 73842 60997 66148 77352 38013 39723 32594 32019 33771 50454 38911 39235 33652 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57966000 18135 2607 17195 34406 27541 27541 1 9606 Homo sapiens 0.08102882484831753 MAGDPVANVR Oxidation (M) 1044.5022 0.50222841 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6;B4E1Q0;E9PH38 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 1 0 3.5 0.5 1 1 35.896 35.948 2 0.0011585 7872 20230619_1883_Aki_TMTPro18x_K_F4 105.94 66.914 100510 78074 84981 96764 115330 108790 113030 104410 126090 106220 132200 132240 133630 113630 124460 129730 158900 136270 92789 71648 88130 96334 117230 109050 114470 107050 127880 108090 135420 132480 135940 118660 128640 130470 151540 129440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 231480000 18136 1860 17196 34407;34408 27542;27543 27543 1186 2 9606 Homo sapiens -0.018242619566535723 MAGDQVANVR Unmodified 1059.5131 0.51312744 2118 A8K8B0;P30154;P30154-2;P30154-4;P30154-3;B7Z1G3;P30154-5;H0YDG7 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 4.5 0.5 1 1 37.807 37.874 2 0.0011885 8658 20230619_1885_Aki_TMTPro18x_K_F5 111.06 80.985 18517 13755 15916 15778 18336 19150 19167 17315 20859 17036 18639 22333 25669 18021 20793 20993 25989 18831 17092 12616 16419 15817 18875 19073 19324 17816 21063 17401 19561 22277 25723 18897 21513 20932 24767 17935 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87141000 18137 2118 17197 34409;34410 27544 27544 1 9606 Homo sapiens -0.014248595823801224 MAGIDDCYTSAR Oxidation (M) 1374.5544 0.55439991 4261 Q8NI62 OK/KNS-cl.6 yes yes 0 1 0 3 0 1 39.02 39.074 2 1.0606E-12 9200 20230619_1882_Aki_TMTPro18x_K_F3 198.61 191.13 60680 48753 54152 63544 61444 71392 69949 61333 75817 80018 56055 63989 100140 66566 60436 127440 99184 136180 56053 44758 55731 63034 63514 71355 70174 63870 76248 79401 60397 65862 98858 71933 64676 127320 94780 129110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81480000 18138 4261 17198 34411 27545 27545 2712 1 9606 Homo sapiens -0.1178951139588662 MAGIDDCYTSAR Unmodified 1358.5595 0.55948529 4261 Q8NI62 OK/KNS-cl.6 yes yes 0 0 0 3.5 0.5 1 1 45.204 45.264 2 9.4904E-18 11837 20230619_1883_Aki_TMTPro18x_K_F4 235.32 228.11 88554 71521 85442 95349 86253 111690 105120 95564 114300 123300 97415 107240 150780 107870 96942 176760 148860 188560 81853 65675 87159 94511 90166 111280 105150 99497 115410 122660 103100 109700 149570 115040 102840 176880 142200 178830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146270000 18139 4261 17198 34412;34413 27546 27546 1 9606 Homo sapiens -0.10545207533255052 MAGNEYVGFSNATFQSER Oxidation (M) 2022.8742 0.87415414 3339 O94925-3;B3KM58;A8K132;O94925;Q68D38 GLS;DKFZp686O15119 Glutaminase kidney isoform, mitochondrial yes no 0 1 0 5.5 0.5 1 1 50.999 51.075 2;3 1.8673E-09 14383 20230619_1886_Aki_TMTPro18x_K_F6 121.51 112.57 38648 34034 42878 48417 41588 53744 46061 47048 45879 51580 54753 49911 55712 51305 54291 54741 59222 62466 35786 31265 43229 47758 43459 53754 46203 48649 47130 51834 55778 50814 56787 53060 55506 55388 56638 59236 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54475000 18140 3339 17199 34414;34415 27547;27548 27548 1956 2 9606 Homo sapiens -0.0963679664062056 MAGNEYVGFSNATFQSER Unmodified 2006.8792 0.87923952 3339 O94925-3;B3KM58;A8K132;O94925;Q68D38 GLS;DKFZp686O15119 Glutaminase kidney isoform, mitochondrial yes no 0 0 0 6 0 1 54.714 54.791 3 2.4002E-30 15922 20230619_1886_Aki_TMTPro18x_K_F6 227 211.37 25776 24277 20738 26326 21916 27510 22227 25148 28275 37942 29051 32958 37576 29940 29983 36129 33552 37827 23819 22236 21538 26433 22730 27678 22592 26185 28565 37493 30164 33550 37706 31331 30854 36284 32097 35894 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111750000 18141 3339 17199 34416 27549 27549 1 9606 Homo sapiens -0.08392492778011729 MAGQAFR Unmodified 779.37484 0.37484305 1453;4826 A0A384N6A4;P61604;B8ZZL8;S4R3N1 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial no no 0 0 0 1 0 1 37.53 37.53 2 0.062947 9007 20230619_1880_Aki_TMTPro18x_K_F1 80.377 10.938 165620 125600 147050 184430 189300 175120 169110 183390 220640 180000 204290 190350 204300 164960 185590 206300 238390 177660 152930 115490 151730 181200 192610 178010 173290 186700 221100 182480 210250 192030 207630 173170 192050 205010 227160 169270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136430000 18142 1453;4826 17200 34417 27550 27550 1 9606 Homo sapiens -0.02366938040165678 MAGTAFDFENMK Oxidation (M) 1376.5741 0.57407272 1080 A0A0S2Z3X8;P31150;B4DHX4;B4E070 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 1 0 6 0 1 55.666 55.742 3 0.0001886 16319 20230619_1886_Aki_TMTPro18x_K_F6 96.604 90.418 80295 72290 78063 92095 79112 97193 92861 90946 108700 100220 109150 109880 113770 90484 102680 113140 117120 128410 74276 66323 79605 91421 82556 97723 93320 93613 109830 101090 112170 110470 115410 95228 105470 114150 112000 121760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61024000 18143 1080 17201 34418 27551 27551 645 1 9606 Homo sapiens -0.09915135385108442 MAHGYGEESEEER Oxidation (M) 1538.5944 0.59435047 2218 B2R5M3;P05060;B4DEA7 CHGB Secretogranin-1;PE-11;GAWK peptide;CCB peptide yes no 0 1 0 1 0 1 27.697 27.697 3 0.012978 5100 20230619_1880_Aki_TMTPro18x_K_F1 58.831 38.45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18144 2218 17202 34419 27552 27552 1382 1 9606 Homo sapiens -0.15340293191593446 MAIMVQSPMFDGK Oxidation (M) 1469.6717 0.67167827 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9;Q05D33;Q6PJL0;A0A7I2V384 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 1 0 1 0 1 59.026 59.026 3 0.00039271 18079 20230619_1880_Aki_TMTPro18x_K_F1 91.858 83.473 49504 42269 47640 56955 50723 59570 55057 54199 52470 62292 63601 60677 63703 53871 61978 71412 61327 71814 45773 38811 48658 56320 52573 59900 55199 55969 54094 62451 64728 61469 64919 56729 63076 71472 58756 68167 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100600000 18145 261 17203 34420 27553 27553 154 1 9606 Homo sapiens -0.0443706978062437 MAKPEEVLVVENDQGEVVR Oxidation (M) 2156.0783 0.078333261 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;A0A7I2YQX3;B3KWD0 XPO1 Exportin-1 yes no 0 1 1 2 0 1 49.665 49.723 3 3.0603E-14 14300 20230619_1881_Aki_TMTPro18x_K_F2 149.16 141.68 57558 50131 47998 57046 59935 57258 58312 58092 56543 68451 69164 68992 72078 58678 70935 79127 72881 81726 53171 45947 49775 57052 61205 57945 58848 59572 58278 68606 70511 69683 73392 61970 72308 79303 69774 77563 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107360000 18146 3228 17204 34421 27554 27554 1900 1 9606 Homo sapiens 0.04653722730017762 MAKPEEVLVVENDQGEVVR Unmodified 2140.0834 0.083418639 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;A0A7I2YQX3;B3KWD0 XPO1 Exportin-1 yes no 0 0 1 3.5 1.12 1 1 1 1 53.392 53.435 3 1.3483000000000001E-24 15675 20230619_1882_Aki_TMTPro18x_K_F3 203.71 188.36 407900 353450 399620 428420 342920 441420 408970 424860 462620 512370 502060 530430 555070 488870 509080 617400 570320 641270 377250 324160 406020 426700 363010 444890 410420 437530 470150 513600 515800 536310 562800 512430 522490 619350 545580 608570 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 731970000 18147 3228 17204 34422;34423;34424;34425 27555;27556;27557;27558;27559 27556 5 9606 Homo sapiens 0.0589802659264933 MAKPPSDIQEIELR Unmodified 1625.8447 0.84469192 4288 Q8WXH0-2;Q8WXH0;D4YW74;G3V5X4;A0A0C4DGK3;Q8WXH0-7;Q7Z362;Q8WXH0-13;Q8WXH0-3;Q6MZP0;Q8WXH0-5;Q8WXH0-10;Q8WXH0-4;Q8WXH0-12;Q8WXH0-11;Q8WXH0-6 SYNE2;TROPH;DKFZp686J1895;DKFZp686M09200 Nesprin-2 yes no 0 0 1 6 0 1 51.026 51.103 3 0.00099208 14368 20230619_1886_Aki_TMTPro18x_K_F6 85.513 61.682 50539 42024 47988 51514 43834 55740 50458 50469 61575 60359 60513 61596 61091 55182 61040 62041 65205 70267 46718 38551 48927 51298 46118 55908 50848 52193 62063 60519 62176 62245 62355 57498 62307 62695 62383 66634 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25615000 18148 4288 17205 34426 27560 27560 1 9606 Homo sapiens 0.05680335871852549 MALELLTQEFGIPIER Oxidation (M) 1874.9812 0.9811854 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62;A0A6Q8PGI8 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 1 0 7 0 1 65.725 65.75 2 0.00020042 20409 20230619_1887_Aki_TMTPro18x_K_F7 94.688 79.715 7532.6 7195.8 7146.2 6546.7 5491.2 6851.8 5911.8 7211.3 8855.6 8851.2 10282 10184 8459.2 7479.9 9464.1 10510 8296.1 11982 6969.5 6581 7262.2 6677.8 5859.4 6917.8 6036 7382.5 8908.3 8895.8 10402 10189 8738.6 7965.4 9549.6 10590 7974.5 11352 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93785000 18149 1637 17206 34427 27561 27561 1062 1 9606 Homo sapiens 0.07869405311635091 MALELLTQEFGIPIER Unmodified 1858.9863 0.98627078 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62;A0A6Q8PGI8 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 66.819 66.84 3 3.9005E-26 20844 20230619_1887_Aki_TMTPro18x_K_F7 190.44 170.01 11764 7561.8 9410.3 10181 8119.8 11182 11872 8786.3 12749 12731 12468 12148 12943 13747 10741 13752 13166 16060 10845 6951.3 9744.6 10076 8659.6 11170 11772 9257.4 12927 12647 12823 12412 13111 14121 11113 13940 12594 15219 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37724000 18150 1637 17206 34428;34429 27562;27563 27562 2 9606 Homo sapiens 0.0911370917426666 MALFAGGK Unmodified 793.41565 0.41564523 4178 Q7Z7H5-3;Q7Z7H5-2;Q7Z7H5;F8W7F7 TMED4 Transmembrane emp24 domain-containing protein 4 yes no 0 0 0 4 0 1 54.574 54.59 2 0.0272 16043 20230619_1883_Aki_TMTPro18x_K_F4 79.939 64.857 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18151 4178 17207 34430 27564 27564 1 9606 Homo sapiens 0.010674032794554478 MALNHPYFNDLDNQIK Oxidation (M) 1947.9149 0.91489675 56 A0A024QZP7;Q5H9N4;P06493;A0A024QZJ8;P06493-2 CDC2;DKFZp686L20222;CDK1 Cyclin-dependent kinase 1 yes no 0 1 0 7 0 1 51.72 51.794 3 1.2867E-08 14354 20230619_1887_Aki_TMTPro18x_K_F7 138.28 128.75 380420 312070 344390 403120 382960 420130 352220 385700 396420 455230 478790 409280 490090 382680 370490 505770 442190 440930 351500 286450 353710 399730 394030 422770 358560 398200 404990 454860 487210 417050 493890 402250 383560 502260 422380 419490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 321240000 18152 56 17208 34431 27565;27566 27565 27 2 9606 Homo sapiens -0.021144105303619654 MALNHPYFNDLDNQIK Unmodified 1931.92 0.91998213 56 A0A024QZP7;Q5H9N4;P06493;A0A024QZJ8;P06493-2 CDC2;DKFZp686L20222;CDK1 Cyclin-dependent kinase 1 yes no 0 0 0 7.5 0.5 1 1 55.201 55.265 3 1.0081E-33 15868 20230619_1887_Aki_TMTPro18x_K_F7 248.23 207.73 300750 260710 293040 296260 261900 358910 312890 321600 326140 415250 381510 321480 417930 339300 311460 432400 368900 356980 278140 238950 297960 297160 276400 357210 313110 333480 334190 411710 389900 331460 420210 354400 322430 428470 352330 339900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 989790000 18153 56 17208 34432;34433 27567;27568 27567 2 9606 Homo sapiens -0.00870106667730397 MAPEVLPK Oxidation (M) 899.47864 0.47863942 564 A0A024R9B7;P09669 COX6C Cytochrome c oxidase subunit 6C yes no 0 1 0 6 0 1 45.716 45.803 2 0.040846 12021 20230619_1886_Aki_TMTPro18x_K_F6 70.525 30.982 41594 38798 48304 53308 58175 56385 52545 53822 76398 56837 77441 87574 72662 59616 56092 74709 84216 75810 38546 35620 48678 52667 59457 56736 54049 55264 76430 58240 79226 86547 73537 63193 58981 74843 80248 72023 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27905000 18154 564 17209 34434 27569 27569 331 1 9606 Homo sapiens 0.024879242768292897 MAPGQLALFSVSDK Acetyl (Protein N-term) 1504.7596 0.7595653 3534 V9HWH7;P31939;B2R7P8;F8WEF0 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes no 1 0 0 7 0 1 65.569 65.594 2 0.0012103 20336 20230619_1887_Aki_TMTPro18x_K_F7 79.82 65.613 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18155 3534 17210 34435 27570 27570 1 9606 Homo sapiens 0.02737590405968149 MAPTPIPTR Oxidation (M) 998.5219 0.52190122 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;B3KSQ7;B7Z2Z0;D6R9Q9 DBN1 Drebrin yes no 0 1 0 7.5 0.5 1 1 38.02 38.045 2 0.0024688 8683 20230619_1888_Aki_TMTPro18x_K_F8 98.933 75.505 176610 146930 153350 169020 205660 212280 177810 174310 203650 178860 249290 252710 199680 180070 237750 181460 244050 250290 163150 134700 158560 169430 208710 210580 181730 180870 207650 182790 251540 250680 207220 188210 241130 186370 233480 236980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 245760000 18156 1396 17211 34436;34437 27571;27572 27572 870 2 9606 Homo sapiens 0.02258114054120597 MAPVPLDDSNRPASLTK Oxidation (M) 1826.9196 0.91964777 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8;Q9NYF8-4;E9PJA7 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 1 1 7.5 0.5 1 1 45.889 45.977 3 1.0474E-06 11723 20230619_1887_Aki_TMTPro18x_K_F7 117.9 99.279 152980 115390 124330 154280 185680 168450 175200 167890 179080 174630 201720 193290 185490 155600 165910 194130 181090 199210 141170 105990 129750 152740 187480 169330 177330 171760 183110 176670 205120 194170 188870 163790 170060 194670 173240 189090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191970000 18157 4629 17212 34438;34439 27573;27574 27573 2832 2 9606 Homo sapiens 0.039264736123868715 MAPVPLDDSNRPASLTK Unmodified 1810.9247 0.92473315 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8;Q9NYF8-4;E9PJA7 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 1 8 0 1 49.506 49.579 3 2.9225E-13 13296 20230619_1888_Aki_TMTPro18x_K_F8 150.19 133.24 300010 239260 284240 325700 270320 353500 352090 339920 352180 400530 360930 353150 418800 326930 351640 408770 381150 400920 277250 219770 290210 322080 284460 354830 350260 349820 359460 400010 372380 359780 422190 342620 360700 408860 364530 380810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 692840000 18158 4629 17212 34440 27575;27576 27575 2 9606 Homo sapiens 0.0517077747501844 MAQALEELR Oxidation (M) 1075.5332 0.53319418 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 1 0 3 0 1 44.196 44.269 2 0.014982 11477 20230619_1882_Aki_TMTPro18x_K_F3 72.243 53.14 109690 88055 98653 104070 112510 114470 134460 123910 143060 124800 149560 142540 143810 118370 129220 143990 138710 143090 101330 80760 101390 103950 116290 115210 134520 125980 145410 126630 152830 143140 146230 124260 132270 144200 132660 135900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136050000 18159 1473 17213 34441 27577 27577 980 1 9606 Homo sapiens -0.0015510864241150557 MAQALEELR Unmodified 1059.5383 0.53827956 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 0 0 4.5 0.5 1 1 54.736 54.775 2 0.0012226 16108 20230619_1883_Aki_TMTPro18x_K_F4 117.81 89.637 340030 307130 327640 331910 287200 444680 372830 373890 493590 404460 379200 387770 403440 355920 382260 420870 386240 400690 314530 281330 333470 334730 305050 439230 374620 387570 491210 406910 395570 393310 410120 371570 389520 420690 369620 380740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 821340000 18160 1473 17213 34442;34443 27578 27578 1 9606 Homo sapiens 0.010891952201973254 MAQAYDFALDK Unmodified 1271.5856 0.58562368 3829 Q12996;B4DMA4;E9PLP8;B4DFQ5 CSTF3 Cleavage stimulation factor subunit 3 yes no 0 0 0 5.5 0.5 1 1 59.384 59.442 3 0.0017172 17906 20230619_1886_Aki_TMTPro18x_K_F6 72.958 51.327 99870 86366 96144 104420 91816 111410 110300 109920 119470 108270 115770 110350 119570 96143 118990 121290 112350 116400 92352 79207 97980 104070 96290 112080 110440 112360 121010 109590 119110 111500 121840 100990 120660 121210 107590 110600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 38319000 18161 3829 17214 34444;34445 27579;27580 27580 2 9606 Homo sapiens -0.039305702994852254 MAQELYMEQK Oxidation (M) 1285.5683 0.56825906 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 1 0 4 0 1 49.005 49.043 3 0.0016147 13543 20230619_1883_Aki_TMTPro18x_K_F4 84.658 36.218 82916 65564 68785 74334 75415 72288 75487 75672 84394 84047 93561 89609 99490 83941 88451 109910 96995 100120 76546 60112 71162 74350 77768 73385 76406 77310 85851 84662 95793 90597 100820 88132 90731 109420 92744 95189 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115620000 18162 487 17215 34446 27581 27581 299 1 9606 Homo sapiens -0.06310233896783757 MAQELYMEQK Unmodified 1269.5733 0.57334444 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 4.5 0.5 1 1 52.421 52.47 3 5.0855E-06 14811 20230619_1885_Aki_TMTPro18x_K_F5 161.51 104.16 153350 119320 140630 142110 116110 164480 150580 148300 169480 184220 191440 183950 214960 168710 159180 226110 215460 221540 141660 109460 143600 141960 123800 164170 150470 153570 172530 184240 196300 186340 215940 177640 166320 225820 205650 210440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 198780000 18163 487 17215 34447;34448 27582;27583 27583 2 9606 Homo sapiens -0.05065930034174926 MAQEVLTHLK Unmodified 1168.6274 0.62742892 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V2S3;A0A7I2V3N0;A0A7I2V4A3;A0A7I2YQX3;C9JKM9;C9J673;A0A7I2V2C5;A0A7I2V3J1;A0A7I2YQP1;A0A7P0Z4B7;F8WF71;C9IYM2 XPO1 Exportin-1 yes no 0 0 0 1 0 1 54.518 54.518 3 0.0001523 16194 20230619_1880_Aki_TMTPro18x_K_F1 121.08 62.098 135010 137250 148550 164300 118070 203570 159320 151940 169070 178620 180310 181450 184830 167530 210580 228990 221430 224680 125130 125800 149520 164160 126690 201510 158590 159540 172170 179220 184770 183710 189820 176470 214380 228820 211780 213440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265610000 18164 3228 17216 34449 27584 27584 1 9606 Homo sapiens 0.049860301797025386 MAQFDAK Oxidation (M) 825.36909 0.36908897 3510 Q53YD7;P26641;P26641-2 EEF1G Elongation factor 1-gamma yes no 0 1 0 5 0.816 1 1 1 40.251 40.326 2 0.058402 9682 20230619_1886_Aki_TMTPro18x_K_F6 74.184 48.447 212970 142130 191330 215480 244800 257030 227240 240360 290630 225130 278440 272520 248750 215150 240330 204040 327930 262780 196540 130810 197090 212010 249630 256300 232100 246270 291730 229880 284890 272500 254540 223290 249120 208650 312470 249200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 743430000 18165 3510 17217 34450;34451;34452 27585;27586 27586 2175 2 9606 Homo sapiens -0.05058081342497189 MAQFDAK Unmodified 809.37417 0.37417435 3510 Q53YD7;P26641;P26641-2 EEF1G Elongation factor 1-gamma yes no 0 0 0 6 0.816 1 1 1 46.388 46.471 2 0.020026 11935 20230619_1887_Aki_TMTPro18x_K_F7 110.81 78.587 1396100 1000800 1230200 1284600 1477800 1563400 1357100 1427600 1854100 1505700 1683200 1551400 1758700 1370900 1393600 1480500 2036100 1731000 1288600 919040 1267400 1277500 1513000 1556800 1390800 1469500 1853000 1519800 1736800 1567100 1775000 1427000 1459200 1499800 1939800 1642600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 874640000 18166 3510 17217 34453;34454;34455 27587;27588 27588 2 9606 Homo sapiens -0.038137774798883584 MAQHLQAAVAFVEQGHVR Unmodified 1991.0159 0.015948196 4601 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 yes yes 0 0 0 3 0 1 55.481 55.522 4 6.448800000000001E-20 16576 20230619_1882_Aki_TMTPro18x_K_F3 193.64 175.23 22816 23439 24696 18341 29750 27447 27800 26528 33325 30159 23063 23087 28116 25767 25247 29900 26379 37021 21145 21409 24962 19102 30408 27082 28307 27244 33251 30085 24369 23847 28417 26725 25816 30360 25302 35048 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268880000 18167 4601 17218 34456 27589 27589 1 9606 Homo sapiens 0.060080859629351835 MAQLQLENK Unmodified 1073.5539 0.55392962 2857 Q3V6T2;D6W5D1;Q3V6T2-2;A0A2U3TZV9;A0A2R8Y7B1;Q3V6T2-3;Q3V6T2-4;Q3V6T2-5;A0A2R8YG73;A0A2R8Y4X4;A0A2R8Y4W8;A0A2R8Y820;A0A2R8YCU9;A0A2R8YGU1;O14997;Q9UI01;Q6DCA5;A0A2R8YG52 CCDC88A;KIAA1212 Girdin yes no 0 0 0 7 0 1 50.132 50.213 3 0.021212 13678 20230619_1887_Aki_TMTPro18x_K_F7 65.347 29.403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18168 2857 17219 34457 27590 27590 1 9606 Homo sapiens 0.020094817372410034 MAQWGNKPVC Oxidation (M) 1205.5321 0.53214833 3483 Q6FGJ9;P21266;Q59EJ5 GSTM3 Glutathione S-transferase Mu 3 yes no 0 1 1 1 0 1 45.109 45.109 2 0.00043454 12331 20230619_1880_Aki_TMTPro18x_K_F1 120.92 95.347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18169 3483 17220 34458 27591 27591 2136 1 9606 Homo sapiens -0.06239646282983813 MAQWGNKPVC Unmodified 1189.5372 0.5372337 3483 Q6FGJ9;P21266;Q59EJ5 GSTM3 Glutathione S-transferase Mu 3 yes no 0 0 1 2.67 0.471 1 2 49.94 50.007 2 0.012397 14156 20230619_1882_Aki_TMTPro18x_K_F3 93.195 75.137 61761 61575 65093 66454 61343 77128 80110 70741 84311 77072 80411 89581 84336 73242 77039 82254 95960 81583 57212 56384 65824 66877 64568 77034 79792 72911 85473 77947 82926 89780 85635 76546 79531 82473 91531 77547 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72254000 18170 3483 17220 34459;34460;34461 27592;27593 27593 2 9606 Homo sapiens -0.049953424203522445 MASNIFGPTEEPQNIPK Unmodified 1871.9087 0.90874874 1969 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2;H3BMV3;H3BMT0;H3BTV5;B4DL85;H3BMM8;B4E1P3 HN1L Hematological and neurological expressed 1-like protein yes no 0 0 0 6.5 0.5 1 1 58.336 58.396 3 1.9211E-13 17162 20230619_1887_Aki_TMTPro18x_K_F7 152.34 125 101710 78856 90962 100630 78494 98917 100970 95927 111460 131000 109710 109830 136660 106250 110760 140920 117820 134870 93932 72388 93184 99809 83248 100060 100830 99158 113030 129850 113810 112340 137320 111620 113650 140610 112780 128100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 250910000 18171 1969 17221 34462;34463 27594;27595;27596 27595 3 9606 Homo sapiens 0.007670712381241174 MASNIFGTPEENQASWAK Oxidation (M) 1995.8996 0.89964061 4675;4676 Q9UK76;J3KT51;Q9UK76-2;Q9UK76-3;J3KSH8 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed no no 0 1 0 6.5 1.12 1 1 1 1 56.829 56.89 3 0.0082073 16541 20230619_1887_Aki_TMTPro18x_K_F7 59.9 51.811 103210 102500 106020 126650 122270 115360 106990 129590 127180 142270 131410 132870 143220 135320 128300 149730 124780 141530 95584 93983 107790 125770 125170 117900 109480 131690 128740 142770 135150 135400 145160 140210 130660 149730 119540 134450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1014599999.9999999 18172 4675;4676 17222 34464;34465;34466;34467 27597;27598 27597 2850 2 9606 Homo sapiens -0.058473221182111956 MASNIFGTPEENQASWAK Unmodified 1979.9047 0.90472599 4675;4676 Q9UK76;J3KT51;Q9UK76-2;Q9UK76-3;J3KSH8 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed no no 0 0 0 7.5 0.5 1 1 60.794 60.831 3 1.7126E-38 18106 20230619_1888_Aki_TMTPro18x_K_F8 248.54 226.7 233650 201010 233100 230260 179110 272870 252750 257810 293660 329050 263710 275920 346190 259510 269320 343050 315960 312900 216110 184260 236120 230780 192910 272200 251890 266220 296000 327080 275620 281910 346860 272840 278190 341480 301830 297520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1047399999.9999999 18173 4675;4676 17222 34468;34469 27599;27600 27600 2 9606 Homo sapiens -0.04603018255579627 MASTFIGNSTAIQ Unmodified 1339.6442 0.6442012 3176 K7ESM5 TUBB6 yes yes 0 0 0 8 0 1 60.054 60.091 2 0.0035659 17825 20230619_1888_Aki_TMTPro18x_K_F8 102.61 66.184 30665 26302 26344 30496 25849 27284 28330 34851 36209 26028 28106 28275 32169 25309 29586 29282 29999 39180 28330 24112 27134 30423 26969 28013 28680 34833 36089 26852 29398 28515 32569 26443 30155 29913 28762 37074 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14371000 18174 3176 17223 34470 27601 27601 1 9606 Homo sapiens -0.01203513724954064 MATFEIDEK Unmodified 1082.4954 0.49541169 1507 P14735;A0A7I2V610;A0A3B3ISG5;A0A7I2V2P6;A0A7I2V3E3;A0A7I2YQV5;Q59GA5;P14735-2;B3KSB8;B7Z7W6;A0A7I2V3K9;A0A7I2V4Q3;A0A7I2V2S1 IDE Insulin-degrading enzyme yes no 0 0 0 3.5 0.5 1 1 54.897 54.926 2 0.088947 16209 20230619_1883_Aki_TMTPro18x_K_F4 60.828 27.708 24475 22777 26327 28368 27182 28901 28000 29226 36780 32581 28396 32591 37629 29500 31247 36537 36921 35329 22665 20890 26613 28198 28188 29196 28458 29923 36652 32758 29958 32969 37801 30915 32226 36521 35260 33575 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17770000 18175 1507 17224 34471;34472 27602 27602 1 9606 Homo sapiens -0.04253619627866101 MATGIEDSELRR Unmodified 1376.6718 0.67181293 3864 Q13619;B2RBV7;A0A0A0MR50;Q13619-2;B4DKT2 CUL4A Cullin-4A yes no 0 0 1 3.5 0.5 1 1 41.006 41.057 3 0.00020674 10071 20230619_1882_Aki_TMTPro18x_K_F3 99.589 80.858 85184 57183 101720 106360 106270 128140 113840 108870 120580 105430 129440 130140 128220 119110 114670 83803 134650 128170 78806 52775 102070 103560 110250 127370 114570 112500 122730 107540 132340 130540 130330 121380 117760 87393 128590 121290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106960000 18176 3864 17225 34473;34474 27603 27603 1 9606 Homo sapiens -0.0014561046475591866 MATGLER Unmodified 776.38507 0.38507338 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 4 0.816 1 1 1 37.575 37.639 2 0.017823 8533 20230619_1885_Aki_TMTPro18x_K_F5 108.09 36.71 256610 175330 262700 270900 331480 380290 319600 325800 407360 314950 361060 342990 378120 314630 305830 266760 428350 364590 237080 161390 267470 267000 338780 374800 325600 336210 407910 319990 373150 345880 382010 323160 318740 274490 408220 345490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 394600000 18177 3194;3631 17226 34475;34476;34477 27604;27605 27605 2 9606 Homo sapiens -0.012063751055961802 MATHTLITGLEEYVR Unmodified 1732.8818 0.8818057 731 P46379-3;P46379;P46379-2;A0A7I2V508;A0A0G2JK23;A0A024RCR6;A0A1U9X7A6;A0A1U9X7A9;A0A7P0MQS5;P46379-5;A0A0G2JL47;P46379-4 BAG6;BAT3 Large proline-rich protein BAG6 yes no 0 0 0 8 0 2 60.126 60.162 2;3 4.4099E-62 17844 20230619_1888_Aki_TMTPro18x_K_F8 238.43 214.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18178 731 17227 34478;34479 27606;27607 27606 2 9606 Homo sapiens 0.04468007417585795 MATNAAAQNAIK Unmodified 1202.6078 0.60775611 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 1 0 1 43.269 43.269 3 0.0030276 11538 20230619_1880_Aki_TMTPro18x_K_F1 72.272 48.896 26978 20287 24787 25419 30001 36218 31571 32292 42056 26171 33636 32792 30646 26839 31637 28685 33642 32171 24916 18622 25451 25388 30839 35700 32054 33089 41847 27012 34772 32799 31430 27975 32246 29004 32159 30525 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33618000 18179 1292 17228 34480 27608 27608 1 9606 Homo sapiens 0.014556541689444202 MATNAAAQNAIK Oxidation (M) 1218.6027 0.60267073 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 1 0 8 0 1 38.802 38.789 3 0.0041197 8992 20230619_1888_Aki_TMTPro18x_K_F8 75.088 39.674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18180 1292 17228 34481 27609 27609 816 1 9606 Homo sapiens 0.0021135030633558927 MATNFLAHEK Oxidation (M) 1176.5597 0.55974328 2288;2925 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;H0YCK7;E9PIZ1;P29692;P29692-3;E9PK01;P29692-4;E9PQZ1;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;E9PK06;E9PMW7;E9PN91;E9PKK3;E9PK72;E9PJD0;E9PNW6 EEF1D Elongation factor 1-delta no no 0 1 0 7 0 1 42.38 42.455 3 0.012229 10247 20230619_1887_Aki_TMTPro18x_K_F7 64.792 42.317 49671 38696 40686 48835 25461 28711 39179 33090 42662 38271 39980 41734 44832 36839 40962 47599 45837 46198 45847 35517 41894 48220 28048 30671 38822 33705 43137 38513 41374 42055 45416 38733 42027 47562 43812 43892 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34873000 18181 2288;2925 17229 34482 27610 27610 1416 1 9606 Homo sapiens -0.021474197510769955 MATNTVYVFAK Unmodified 1243.6271 0.62709457 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 0 3 0 1 57.212 57.245 3 0.020835 17331 20230619_1882_Aki_TMTPro18x_K_F3 60.255 29.643 27519 22682 27732 29985 22066 38139 30983 26563 38498 33834 30659 29802 35136 26899 30423 30213 29329 38003 25448 20825 28102 29770 23726 37642 30942 28143 38474 33709 32013 30326 35472 28053 30960 30743 28133 35981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22918000 18182 2484 17230 34483 27611 27611 1 9606 Homo sapiens 0.015026104598746315 MATQASTLYSNNITK Unmodified 1641.8032 0.80322103 87 Q2TB59;A0A024R0C3;Q13423;A0A590UJM2;A0A590UK29;E9PCX7;A0A590UK15;A0A590UJI3 NNT NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 2.5 0.5 1 1 51.445 51.502 3 1.4293E-07 14810 20230619_1882_Aki_TMTPro18x_K_F3 123.76 105.16 116130 90700 100440 98057 137850 206150 155730 136050 209620 78975 83973 83265 93024 71692 100280 83323 88050 92090 107240 83126 103990 99811 141260 198480 157420 142280 205040 83349 92491 84004 94998 75000 101070 84093 84392 87360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205520000 18183 87 17231 34484;34485 27612 27612 1 9606 Homo sapiens 0.007991551125087426 MAVDGGCGDTGDWEGR Oxidation (M) 1697.641 0.64098309 2301 J3JZZ9;B2RBP3;Q8TBC4 UBE1C;UBA3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 1 0 1 0 1 41.884 41.884 2 0.00027549 10926 20230619_1880_Aki_TMTPro18x_K_F1 93.623 93.623 12249 11086 13144 13734 16501 15253 14715 17092 14702 14437 13299 12326 16713 12425 11982 17338 16313 16238 11340 10168 13327 13676 16797 15358 14948 17252 14937 14664 13851 12627 16717 13083 12536 17265 15565 15435 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32397000 18184 2301 17232 34486 27613 27613 1423 1 9606 Homo sapiens -0.1799317663196689 MAVIEYK Unmodified 852.44153 0.44152563 4587 Q9NRX2;E9PKV2 MRPL17 39S ribosomal protein L17, mitochondrial yes no 0 0 0 7 0.816 1 1 1 51.872 51.947 2 0.017824 14454 20230619_1887_Aki_TMTPro18x_K_F7 108.09 48.881 100940 88872 97589 103720 96260 117770 121100 110570 130360 126520 132820 127040 144230 115800 113210 138300 152010 131090 93358 81472 99461 103730 100840 117840 120920 113910 132370 127050 136590 128600 145360 121040 117930 138150 144920 124670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71326000 18185 4587 17233 34487;34488;34489 27614;27615 27614 2 9606 Homo sapiens 0.00940252731061264 MAVLNEQVK Oxidation (M) 1046.543 0.54303059 3605 P49321;P49321-3;P49321-4;B4DS57;P49321-2;Q5T626;Q5T624;Q9P1N1;O95138;H0YDS9;H0YF33;E9PRH9 NASP Nuclear autoantigenic sperm protein yes no 0 1 0 5.5 0.5 1 1 43.634 43.72 2 0.00043211 11099 20230619_1886_Aki_TMTPro18x_K_F6 131.22 98.102 207360 171430 203310 219420 260980 277850 233940 216340 287690 164280 189400 142380 143300 115080 197320 167570 181560 127050 191720 157340 207810 218330 265800 275120 239000 223930 285710 168450 196710 144870 150280 122370 198650 165400 173490 121310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 211630000 18186 3605 17234 34490;34491 27616;27617 27617 2274 2 9606 Homo sapiens 0.021620793629836044 MAVLNEQVK Unmodified 1030.5481 0.54811597 3605 P49321;P49321-3;P49321-4;B4DS57;P49321-2;Q5T626;Q5T624;Q9P1N1;O95138;H0YDS9;H0YF33;E9PRH9 NASP Nuclear autoantigenic sperm protein yes no 0 0 0 7 0.816 1 1 1 50.151 50.229 2 5.0739E-08 13629 20230619_1888_Aki_TMTPro18x_K_F8 198.65 135.08 728180 618690 649770 640290 688000 797390 705550 647400 783340 462350 461790 353030 401280 326950 564180 493320 486230 275440 672890 566630 667110 647190 712630 791120 712570 666960 779830 474620 485950 363220 419250 346710 566070 481200 464520 264690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1095500000 18187 3605 17234 34492;34493;34494 27618;27619 27619 2 9606 Homo sapiens 0.03406383225592435 MAVTFIGNSTAIQELFK Unmodified 1868.9706 0.97062071 1486;1954 P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;B4DMJ5;Q6P602;A4UCU2 TUBB Tubulin beta chain no no 0 0 0 3.5 0.5 1 1 65.317 65.339 3 1.3793E-09 20682 20230619_1882_Aki_TMTPro18x_K_F3 138.39 126.22 25062 13137 18323 21638 17994 24817 22141 20802 26197 26704 31633 32050 36365 28364 29785 32393 33774 46519 23071 12119 19195 21176 18891 24737 22210 21695 26674 26840 32404 32173 36632 29628 30642 33262 32364 43987 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 156210000 18188 1486;1954 17235 34495;34496 27620;27621 27620 2 9606 Homo sapiens 0.07089422657259092 MAVTFIGNSTAIQELFK Oxidation (M) 1884.9655 0.96553533 1486;1954 P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;B4DMJ5;Q6P602;A4UCU2 TUBB Tubulin beta chain no no 0 1 0 4 0 1 64.169 64.177 3 1.8791E-06 20106 20230619_1883_Aki_TMTPro18x_K_F4 107.5 95.33 7181.2 5062 7155.2 8270.1 7729.1 10720 8087.3 6359.5 8561.6 9097.7 11698 12575 11295 10083 11684 13298 11966 16675 6634.3 4662.2 7288.9 8109.5 8009.4 10545 8147.7 6880.3 8819 9157.2 11845 12527 11560 10654 11900 13493 11478 15785 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23439000 18189 1486;1954 17235 34497 27622 27622 989 1 9606 Homo sapiens 0.05845118794627524 MAVTFIGNSTAIQELFKR Oxidation (M) 2041.0666 0.066646362 1486;1954 P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;B4DMJ5;Q6P602;A4UCU2 TUBB Tubulin beta chain no no 0 1 1 5 0 1 62.339 62.386 3 0.0039697 18995 20230619_1885_Aki_TMTPro18x_K_F5 77.023 57.185 183390 155750 173180 193200 190590 177360 201950 197150 177470 223890 207110 191380 175820 164610 188790 218890 185340 180690 169540 142890 177120 191850 196550 181110 202260 200780 183610 223700 209690 194900 181130 173450 191740 216880 177330 172040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 641410000 18190 1486;1954 17236 34498 27623 27623 989 1 9606 Homo sapiens 0.08775570497323315 MCDLVSDFDGFSER Oxidation (M) 1692.676 0.67597161 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 1 0 3 0 1 59.638 59.667 2 0.0023347 18281 20230619_1882_Aki_TMTPro18x_K_F3 83.226 78.335 18315 14143 13999 15990 13719 13401 14390 17064 15412 17090 14935 13539 16607 12004 15101 18713 16853 16781 16896 12968 14582 15971 14288 13841 14514 17173 15641 17151 15410 13865 16812 12799 15499 18576 16107 15959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7087600 18191 351 17237 34499 27624 27624 212 1 9606 Homo sapiens -0.1426593382404917 MCDLVSDFDGFSER Unmodified 1676.6811 0.68105699 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 0 0 3 0.816 1 1 1 63.101 63.117 3 8.0952E-09 19726 20230619_1882_Aki_TMTPro18x_K_F3 157.43 151.32 46123 34186 42024 47990 34635 42406 49731 47060 49779 52120 51101 58282 61528 46625 45927 64853 63611 70861 42592 31421 42965 47248 36995 43391 49271 47915 50782 52570 52862 58488 61703 49477 48058 65147 60742 67214 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129460000 18192 351 17237 34500;34501;34502 27625 27625 1 9606 Homo sapiens -0.1302162996144034 MCGTLPYVAPELLK Oxidation (M) 1606.8099 0.80988632 2586 E7EPP6;B4DT73;O14757-2;O14757;O14757-3;E9PPA5;E9PKQ3 CHEK1 Serine/threonine-protein kinase Chk1 yes no 0 1 0 1 0 1 61.634 61.634 3 0.021546 19156 20230619_1880_Aki_TMTPro18x_K_F1 50.94 39.024 24762 22166 22780 23093 24459 26100 26495 29577 32595 28571 26750 23637 32799 29185 26385 32673 26563 28216 22895 20299 23333 23304 25334 26255 26789 29930 32631 28791 27960 24434 32986 30100 26988 32514 25425 26841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19881000 18193 2586 17238 34503 27626 27626 1564 1 9606 Homo sapiens 0.030753767395026443 MCLAHSAGVVPTSQSLADMQDHAPAIGR Unmodified 2919.379 0.37896551 1731 A0A804HJA4;J3KN16;Q5VYK3;B3KXF2;R4GMY1;B3KV72 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 1 0 1 52.322 52.322 4 0.003179 15341 20230619_1880_Aki_TMTPro18x_K_F1 66.282 59.777 17556 14014 16073 19791 16137 19657 16612 17334 21455 20024 16209 17458 19061 14914 18363 19462 17102 19019 16220 12878 16475 19498 16796 19826 16874 17944 21385 20020 17013 17745 19322 15718 18623 19457 16389 18062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18921000 18194 1731 17239 34504 27627 27627 1 9606 Homo sapiens -0.003948816733100102 MCLFAGFQR Oxidation (M) 1144.5158 0.51576998 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 1 0 4 0.816 1 1 1 53.145 53.195 2 0.0001218 15423 20230619_1883_Aki_TMTPro18x_K_F4 145.88 135.01 960280 909520 812140 786470 1200400 1262300 1047800 1101400 1382900 247890 208570 227120 244770 201200 478480 269520 250740 206430 887690 831530 842950 811450 1212500 1237200 1074700 1113000 1339700 297860 271540 231400 260160 211960 468690 266920 241800 196900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 672810000 18195 3776 17240 34505;34506;34507 27628;27629 27628 2461 2 9606 Homo sapiens -0.05070727449083279 MCLFAGFQR Unmodified 1128.5209 0.52085536 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 5.5 0.5 1 1 59.931 59.988 2 7.8041E-05 18102 20230619_1886_Aki_TMTPro18x_K_F6 191.91 162.81 1115300 996680 959830 903250 935320 1511000 1090000 1166300 1574900 132650 84710 97063 125800 103360 379920 152730 162880 100560 1030700 911700 987880 928520 982760 1472900 1104100 1187200 1512600 191450 159470 101330 139790 108990 368590 150510 157510 96296 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 636820000 18196 3776 17240 34508;34509 27630;27631 27631 2 9606 Homo sapiens -0.038264235864517104 MCQGGDFTR Oxidation (M) 1086.4223 0.42226353 3735 P62937-2;A0A7I2V4V1 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 1 0 3.5 0.5 1 1 32.273 32.342 2 0.0039221 6500 20230619_1882_Aki_TMTPro18x_K_F3 93.938 73.037 56581 33478 48134 56642 55427 76635 64635 57043 89556 75183 92034 96939 94495 81993 76203 89293 102060 104690 52164 30874 49788 55495 57429 75450 65368 60139 89846 75735 94419 96902 95528 85458 79308 90439 97423 99264 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67790000 18197 3735 17241 34510;34511 27632;27633 27632 2411 2 9606 Homo sapiens -0.11749071622148222 MCQGGDFTR Unmodified 1070.4273 0.4273489 3735 P62937-2;A0A7I2V4V1 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 38.205 38.273 2 0.00081725 8844 20230619_1883_Aki_TMTPro18x_K_F4 122.33 83.537 69323 46088 72188 76430 74695 91710 72521 80396 96297 82893 97991 106920 105030 94552 92797 87475 114540 117410 64048 42468 73160 74839 77438 91246 74025 82970 96781 84410 100810 106980 106440 97576 95742 89720 109400 111190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58784000 18198 3735 17241 34512;34513 27634;27635 27634 2 9606 Homo sapiens -0.10504767759516653 MCTLIDKFDEHDGPVR Unmodified 1931.887 0.88696744 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ITV3;A0A3B3ISK1;A0A3B3IS23;A0A3B3ITX2 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 1 6 0 1 55.36 55.436 4 4.1064E-11 16272 20230619_1886_Aki_TMTPro18x_K_F6 163.51 149.67 102520 82697 90876 97732 84271 106200 99790 115910 124890 127860 114680 112330 135320 108280 108570 140210 130210 130970 94702 75844 93241 97605 88644 106940 100540 117980 125480 128090 119000 114640 136160 113560 112240 139770 124380 124500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 734130000 18199 3647 17242 34514 27636 27636 1 9606 Homo sapiens -0.041700567821408185 MCYLTIK Oxidation (M) 943.45071 0.45071011 4753;1219 Q9Y678;A0A140VK12;Q9UBF2;Q9H9B7;Q9UBF2-2 COPG1;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma-2;Coatomer subunit gamma no no 0 1 0 2 0 1 49.853 49.912 2 0.039707 14427 20230619_1881_Aki_TMTPro18x_K_F2 85.265 35.138 60925 48601 52360 56160 64431 78046 62107 57608 76373 55528 55962 43632 56508 41767 50717 65884 63752 54701 56261 44566 54113 56370 66007 76779 63169 60208 76135 55938 58313 44858 57365 44447 52475 65143 60809 52107 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58473000 18200 4753;1219 17243 34515 27637 27637 757 1 9606 Homo sapiens -0.023277219749047617 MCYLTIK Unmodified 927.4558 0.45579548 4753;1219 Q9Y678;A0A140VK12;Q9UBF2;Q9H9B7;Q9UBF2-2 COPG1;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma-2;Coatomer subunit gamma no no 0 0 0 4 0 1 55.467 55.479 3 0.018274 16447 20230619_1883_Aki_TMTPro18x_K_F4 79.597 28.99 21923 21102 22830 23632 29441 31324 24826 29932 36474 21677 24510 24159 25860 22343 22022 29937 24270 27339 20301 19331 23217 23766 29945 31064 25663 30433 35979 22455 25760 24380 26178 23501 22631 29792 23221 25983 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11531000 18201 4753;1219 17243 34516 27638 27638 1 9606 Homo sapiens -0.01083418112284562 MDAAEVEFLAEK Acetyl (Protein N-term);Oxidation (M) 1409.6384 0.63844712 4701 Q9Y248;Q53G08 GINS2 DNA replication complex GINS protein PSF2 yes no 1 1 0 1 0 1 62.951 62.951 2 0.00018276 19680 20230619_1880_Aki_TMTPro18x_K_F1 52.79 48.773 19028 16818 23253 26222 23268 23257 22242 25175 23483 32538 30416 25503 31613 27941 27233 33827 30279 36020 17636 15467 23283 25658 24108 23785 22550 25775 24178 32260 30897 26312 32023 29062 27977 33999 28981 34168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27094000 18202 4701 17244 34517 27639 27639 2866 1 9606 Homo sapiens -0.04998657027317677 MDAAEVEFLAEK Acetyl (Protein N-term) 1393.6435 0.64353249 4701 Q9Y248;Q53G08 GINS2 DNA replication complex GINS protein PSF2 yes no 1 0 0 1.5 0.5 1 1 65.197 65.201 2 7.7281E-07 20612 20230619_1880_Aki_TMTPro18x_K_F1 81.338 67.131 21980 16993 19445 21990 16697 22763 19231 20272 21723 25574 25294 25716 24873 18775 25014 27641 25298 28241 20298 15602 19941 21801 17673 22891 19334 21025 22150 25555 25772 25863 25387 20077 25466 27657 24223 26806 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58042000 18203 4701 17244 34518;34519 27640;27641 27640 2 9606 Homo sapiens -0.037543531646861084 MDAEHPELR Oxidation (M) 1112.4921 0.49205765 897 A0A090N7T9;Q12765;Q12765-2;A0A024RA21;Q12765-3;B4DH22;C9K052 SCRN1 Secernin-1 yes no 0 1 0 1.5 0.5 1 1 30.236 30.271 3 0.00015682 6080 20230619_1880_Aki_TMTPro18x_K_F1 125.71 105.93 64462 46619 52113 67783 74273 78498 77046 72707 90196 72856 94145 99158 81995 78534 80608 93907 100330 101520 59469 42869 54400 66804 75484 78415 77892 74709 91205 74453 95909 98790 84085 82449 83156 94509 95814 96335 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 224460000 18204 897 17245 34520;34521 27642;27643 27642 509 2 9606 Homo sapiens -0.059688696819193865 MDAEHPELR Unmodified 1096.4971 0.49714303 897 A0A090N7T9;Q12765;Q12765-2;A0A024RA21;Q12765-3;B4DH22;C9K052 SCRN1 Secernin-1 yes no 0 0 0 1.5 0.5 1 1 35.735 35.764 3 3.8132E-05 8271 20230619_1880_Aki_TMTPro18x_K_F1 136.63 78.675 94776 71328 98933 103310 109050 113210 105330 104030 121910 110550 132820 132280 127830 106700 129250 132000 156700 140310 87624 65578 100320 101800 112320 113510 106960 107110 123640 112050 135560 132480 130710 112250 132930 132700 149550 133240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 411050000 18205 897 17245 34522;34523 27644 27644 1 9606 Homo sapiens -0.04724565819287818 MDAGFFR Acetyl (Protein N-term) 884.38507 0.38507338 1107 A0A994J4Y3;A0A0S2Z4W1;A9Z1X7;A0A994J7H1;B7Z7U0;A0A994J7V4;A0A0S2Z4Z6;Q8IYB3-2;Q8IYB3;M0R1E7 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 1 0 0 3 0 1 61.469 61.498 2 0.002195 19015 20230619_1882_Aki_TMTPro18x_K_F3 110.54 65.563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18206 1107 17246 34524 27645 27645 1 9606 Homo sapiens -0.06174375105604213 MDAILTEAIK Unmodified 1103.5896 0.58964643 4054 Q5SSJ5;Q5SSJ5-2;B0QZK4;Q5SWC8;Q5SSJ5-3 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 6 0 1 62.324 62.375 2 1.3317E-05 19170 20230619_1886_Aki_TMTPro18x_K_F6 163.94 124.64 239470 193280 194280 236060 176360 225380 258630 251480 309290 247100 224290 230960 294250 278900 204030 285440 345540 373450 221070 177320 201180 234750 187210 229240 257440 255030 308700 249670 237150 236890 294220 286540 217300 291380 329430 353670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174460000 18207 4054 17247 34525 27646 27646 1 9606 Homo sapiens 0.04199519194230561 MDANVLMHLR Unmodified 1198.5951 0.59508293 2240 B4DXX1;B2R713;Q7Z2T5;Q7Z2T5-2 TRMT1L TRMT1-like protein yes no 0 0 0 1 0 1 51.944 51.944 3 0.00026555 15174 20230619_1880_Aki_TMTPro18x_K_F1 96.171 77.441 13381 8901 13391 15901 12131 19322 13332 16625 18603 18255 14562 14212 18125 15894 15117 19067 17158 22337 12358 8210.3 13604 15511 12790 19189 13545 17201 18506 18245 15282 14671 18250 16517 15561 19278 16432 21162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12709000 18208 2240 17248 34526 27647 27647 1 9606 Homo sapiens 0.0037291950504823035 MDASTGDAIK Oxidation (M) 1023.4543 0.45427516 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8;H0YJB6 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 1 0 3 0 1 38.479 38.532 2 0.056503 9016 20230619_1882_Aki_TMTPro18x_K_F3 61.56 35.823 15857 10432 23121 21825 32133 31889 25003 30641 28021 29229 30579 34309 34927 28224 32630 21010 37164 32433 14700 9646.6 23006 21220 32427 31438 25738 31323 28505 29759 31473 34352 35389 28957 33401 21912 35482 30702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14621000 18209 385 17249 34527 27648 27648 241 1 9606 Homo sapiens -0.05651380667336525 MDATANDVPSDR Oxidation (M) 1306.5459 0.54594371 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 1 0 1 0 1 32.938 32.938 2 1.2272E-06 7125 20230619_1880_Aki_TMTPro18x_K_F1 153.11 134.33 44434 29506 44517 37854 61157 72002 58095 63859 76554 56999 72313 76853 68496 64713 69680 58507 75488 73111 41039 27105 45438 37998 62190 69998 59320 65561 76694 58617 74261 76684 70133 66802 71090 59760 72154 69296 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223110000 18210 909 17250 34528 27649 27649 516 1 9606 Homo sapiens -0.09506742040844074 MDATANDVPSDR Unmodified 1290.551 0.55102909 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 1.5 0.5 1 1 38.667 38.7 2 1.1175E-23 9481 20230619_1880_Aki_TMTPro18x_K_F1 252.16 230.03 147800 99069 134310 127530 168080 202560 176110 174730 242850 193130 224070 233170 241320 198300 202420 208730 263390 245410 136410 91008 138070 127440 172410 198420 179100 180840 242700 195560 231540 233670 243920 206320 209900 211640 251290 232760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 354900000 18211 909 17250 34529;34530 27650;27651 27650 2 9606 Homo sapiens -0.08262438178212506 MDATANDVPSPYEVR Unmodified 1663.7512 0.75118546 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;B4DJ98;B4DDM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 3 0.816 1 1 1 49.94 49.996 2 6.373E-33 14111 20230619_1882_Aki_TMTPro18x_K_F3 256.31 239.28 130270 110870 126350 115990 119400 153780 139220 145040 167210 207010 189060 207230 216110 195950 196110 230480 224780 245280 120450 101550 128540 117300 125320 152430 140150 150340 169870 205850 194260 209900 218860 204310 201550 231780 214930 232730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 334900000 18212 2389 17251 34531;34532;34533 27652;27653;27654 27653 3 9606 Homo sapiens -0.05414008301249851 MDATANDVPSPYEVR Oxidation (M) 1679.7461 0.74610008 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;B4DJ98;B4DDM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 1 0 2.33 0.471 2 1 45.164 45.243 2;3 2.9229E-14 11896 20230619_1882_Aki_TMTPro18x_K_F3 190.66 165.82 17179 15217 14900 16243 18552 19233 19193 16540 24541 22169 23505 19054 20295 19422 22658 25459 21590 25841 15876 13938 15389 16362 19002 19171 19469 17238 24648 22024 23998 19520 20941 20337 22959 25498 20697 24524 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280880000 18213 2389 17251 34534;34535;34536 27655;27656 27656 1472 2 9606 Homo sapiens -0.06658312163881419 MDCQECPEGYR Oxidation (M) 1459.5166 0.5166342 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 FLNA;FLJ00119 Filamin-A yes no 0 1 0 1.33 0.471 2 1 33.502 33.521 2;3 0.0016319 7091 20230619_1881_Aki_TMTPro18x_K_F2 94.692 93.919 55374 39600 47952 51515 70546 76096 63150 63984 90289 68444 77600 81895 75058 69183 77028 83190 89862 87679 51106 36372 49690 51350 71346 74798 64910 66300 89873 69402 80135 82105 76840 72496 79034 83609 85840 83238 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 278640000 18214 3484 17252 34537;34538;34539 27657;27658;27659 27659 2142 3 9606 Homo sapiens -0.19474345652997727 MDCQECPEGYR Unmodified 1443.5217 0.52171957 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 FLNA;FLJ00119 Filamin-A yes no 0 0 0 1.5 0.5 1 1 38.308 38.34 2 9.5001E-12 9035 20230619_1881_Aki_TMTPro18x_K_F2 195.3 195.3 104750 84313 89980 91873 129550 150830 125470 125480 160800 137690 147410 158650 165950 129680 136230 157750 165640 157240 96739 77269 93264 92947 131480 147450 127780 130210 161250 139210 152730 159110 167320 136240 140780 157990 158140 149380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 187320000 18215 3484 17252 34540;34541 27660;27661 27661 2 9606 Homo sapiens -0.18230041790366158 MDCVWSNWK Oxidation (M) 1240.5005 0.50051385 2026 Q6IAX4;A8K3B9;Q16799-3 RTN1 Reticulon;Reticulon-1 yes no 0 1 0 8 0 1 55.693 55.755 3 0.0205 16050 20230619_1888_Aki_TMTPro18x_K_F8 59.931 55.216 72528 57268 67405 65798 66336 70661 74536 71506 83034 55909 50845 56156 54754 47227 67732 94602 55140 60676 67011 52513 68869 65844 69203 71120 74925 72590 82761 57389 53933 56792 56395 51452 68110 92317 52918 57970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44546000 18216 2026 17253 34542 27662 27662 1269 1 9606 Homo sapiens -0.11011639036951237 MDDPTVNWSNER Oxidation (M) 1478.6096 0.6096066 3455 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 0 1 0 2 0 1 43.315 43.396 2 4.9521E-05 11422 20230619_1881_Aki_TMTPro18x_K_F2 126.03 115.79 100970 73975 88016 91590 69825 98060 87036 89974 102510 134510 135100 149650 144780 134750 109410 154440 161210 140160 93200 67902 90252 91138 74651 98440 87308 93666 104990 133970 137550 150670 145890 140440 114970 153970 153600 133350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110990000 18217 3455 17254 34543 27663 27663 2104 1 9606 Homo sapiens -0.11055381603728165 MDDPTVNWSNERYEECK Oxidation (M) 2187.8837 0.88373255 3455 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 0 1 1 2 0 1 46.252 46.331 3 1.2273E-06 12743 20230619_1881_Aki_TMTPro18x_K_F2 124.68 114.28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18218 3455 17255 34544 27664 27664 2104 1 9606 Homo sapiens -0.16269396417419557 MDDPTVNWSNERYEECK Unmodified 2171.8888 0.88881793 3455 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 0 0 1 4 0 1 49.532 49.566 3 3.0348E-09 13774 20230619_1883_Aki_TMTPro18x_K_F4 133.86 108.94 67888 68934 80341 70890 65620 73238 72188 76826 73338 103340 90070 77438 111840 81040 79086 111470 101640 97474 62964 63093 80292 71536 69461 74007 72521 78909 75494 102170 92461 79971 111810 85162 82417 110640 97001 92744 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49323000 18219 3455 17255 34545 27665 27665 1 9606 Homo sapiens -0.1502509255478799 MDDREDLVYQAK Acetyl (Protein N-term);Oxidation (M) 1539.6875 0.68752257 3709 V9HW98;P62258;B4DJB0;B4DJF2;I3L3T1;I3L0W5 HEL2;YWHAE 14-3-3 protein epsilon yes no 1 1 1 1.33 0.471 2 1 45.933 45.96 2;3 0.05928 12670 20230619_1880_Aki_TMTPro18x_K_F1 53.751 44.888 159360 134900 125680 153060 144430 136890 141490 135230 138720 175090 195160 183230 191070 164840 180620 198420 184670 200850 147130 123650 130870 152880 148340 139730 142810 139410 143880 174990 197330 185080 194620 172420 184180 198950 176760 190680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2377800000 18220 3709 17256 34546;34547;34548 27666 27666 2393 1 9606 Homo sapiens -0.06073368738361751 MDDREDLVYQAK Acetyl (Protein N-term) 1523.6926 0.69260795 3709 V9HW98;P62258;B4DJB0;B4DJF2;I3L3T1;I3L0W5 HEL2;YWHAE 14-3-3 protein epsilon yes no 1 0 1 2.5 0.5 1 1 50.535 50.596 3 0.00021152 14659 20230619_1881_Aki_TMTPro18x_K_F2 47.288 32.726 132860 113350 129850 143020 105730 133750 125660 119630 141900 160780 164020 173590 187520 156620 173590 178900 187440 202710 122860 104000 131880 141850 112420 135600 126110 124360 144630 160660 168350 175020 189960 163350 177550 180740 179310 192230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 898920000 18221 3709 17256 34549;34550 27667 27667 1 9606 Homo sapiens -0.048290648757301824 MDDTLFQLK Acetyl (Protein N-term) 1151.5533 0.55326092 1615 A0A6Q8PGM8;B4DXN3;A0A6Q8PF35;F8VUA2;F8VVT7;F5H875;A0A6Q8PFF9;Q9HD42;A0A6Q8PGI9;A0A6Q8PF26;A0A6Q8PHU0;A0A6Q8PFF8 CHMP1A Charged multivesicular body protein 1a yes no 1 0 0 3.5 0.5 1 1 65.124 65.145 2 8.9479E-05 20460 20230619_1883_Aki_TMTPro18x_K_F4 91.065 79.697 76542 64385 69165 76768 48160 86094 75970 72361 80320 91953 81286 82094 97927 76911 77726 99093 92743 92199 70732 59045 70650 76624 52705 85959 75135 75408 81689 91578 84078 83612 98425 80713 80338 98774 88587 87647 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114130000 18222 1615 17258 34551;34552 27668;27669 27669 2 9606 Homo sapiens -0.016453577024549304 MDEAVGDLK Acetyl (Protein N-term) 1018.4641 0.46411156 3937 Q15645;Q15645-2 TRIP13 Pachytene checkpoint protein 2 homolog yes no 1 0 0 1 0 1 57.934 57.934 2 0.0020516 17657 20230619_1880_Aki_TMTPro18x_K_F1 59.8 45.805 69118 47956 61319 56823 49505 65522 59238 58821 67562 68311 68201 60310 77745 61910 72575 74485 75313 82103 63791 44011 62741 56792 52734 65422 59452 60802 68404 68301 70317 61685 78768 64523 74053 75066 72079 77876 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48835000 18223 3937 17259 34553 27670 27670 1 9606 Homo sapiens -0.04438192661973517 MDEDGLPLMGSGIDLTK Acetyl (Protein N-term) 1832.8536 0.85360162 2959 F5H0A7;F5GXZ4;F5H2P1;F5GWI9;F5GXZ7;F5GZ97;Q9Y3C0 CCDC53 WASH complex subunit CCDC53 yes no 1 0 0 3 0 1 66.208 66.244 2 0.00033718 21026 20230619_1882_Aki_TMTPro18x_K_F3 62.924 45.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18224 2959 17260 34554 27671 27671 1 9606 Homo sapiens -0.029511033446624424 MDEDVLTTLK Acetyl (Protein N-term);Oxidation (M) 1221.5799 0.5798696 4557 Q9NP72;Q9NP72-2;B7Z5V3;B7Z4P9;Q5W0J0;A0A804HIB9;Q9NP72-3;A0A8C8NLQ3;Q9BZT2;A0A087X163;A0A804HK95;A0A804HLG5;A0A804HIM2;A0A804HJ83 RAB18 Ras-related protein Rab-18 yes no 1 1 0 1 0 1 61.101 61.101 2 0.00016711 18904 20230619_1880_Aki_TMTPro18x_K_F1 76.827 61.745 63417 50752 62968 66007 59159 64615 59463 63836 70424 80547 78270 79111 78303 66806 81549 88448 79732 90999 58629 46593 63953 65388 61770 65431 60326 65712 71502 80439 79959 79961 80064 70471 82812 88653 76383 86363 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63499000 18225 4557 17261 34555 27672;27673 27673 2814 2 9606 Homo sapiens -0.022057136018020174 MDEDVLTTLK Acetyl (Protein N-term) 1205.585 0.58495498 4557 Q9NP72;Q9NP72-2;B7Z5V3;B7Z4P9;Q5W0J0;A0A804HIB9;Q9NP72-3;A0A8C8NLQ3;Q9BZT2;A0A087X163;A0A804HK95;A0A804HLG5;A0A804HIM2;A0A804HJ83 RAB18 Ras-related protein Rab-18 yes no 1 0 0 2 0 1 63.897 63.906 2 3.6004E-11 20350 20230619_1881_Aki_TMTPro18x_K_F2 101.64 95.279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18226 4557 17261 34556 27674 27674 1 9606 Homo sapiens -0.00961409739170449 MDEEFTK Unmodified 898.37423 0.37423392 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 2 0.816 1 1 1 47.658 47.708 2 0.0078468 13383 20230619_1881_Aki_TMTPro18x_K_F2 121.99 69.306 342910 248230 286850 325090 320080 386510 355450 341530 476590 420380 464940 446020 500570 375770 368020 508440 538220 483100 316420 228000 296840 322690 331400 385030 359990 354150 478020 421590 478780 449460 503290 397130 386700 506950 512940 459320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 316940000 18227 12 17262 34557;34558;34559 27675;27676;27677 27675 3 9606 Homo sapiens -0.07901822270537195 MDELQLFR Oxidation (M) 1066.5117 0.51173046 3656 P55072;V9HW80;A0A7P0TAW3;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;A0A7P0TBK7;A0A7P0Z4D1;A0A7P0T946;A0A7P0T971 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 1 0 3.5 0.5 1 1 53.618 53.654 2 0.011472 15649 20230619_1883_Aki_TMTPro18x_K_F4 93.429 61.493 364960 337930 351330 390390 456710 550290 429510 424790 595990 426780 432150 424780 443040 413100 412750 504000 1459600 465640 337640 309710 359920 391940 466020 541360 439570 442610 590800 431720 451480 431140 452270 431100 477980 502620 1379600 446320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 333510000 18228 3656 17263 34560;34561 27678 27678 2361 1 9606 Homo sapiens -0.0188649367112248 MDELQLFR Unmodified 1050.5168 0.51681584 3656 P55072;V9HW80;A0A7P0TAW3;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;A0A7P0TBK7;A0A7P0Z4D1;A0A7P0T946;A0A7P0T971 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 0 5.5 0.5 1 1 60.046 60.102 2 0.0020091 18158 20230619_1886_Aki_TMTPro18x_K_F6 133.55 114.82 1053600 863680 961840 1116400 933720 1245000 1166300 1149700 1351900 1363700 1297700 1301900 1411700 1157500 1297700 1453200 1368500 1508100 973590 792780 985600 1108100 980400 1246400 1168200 1186900 1365000 1364900 1339100 1319600 1431500 1214900 1326400 1458200 1309700 1431300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 961140000 18229 3656 17263 34562;34563 27679;27680;27681 27680 3 9606 Homo sapiens -0.00642189808513649 MDENEFVAVTSTNAAK Oxidation (M) 1741.7829 0.78287952 2811 O14531;D3DRG7;Q5T0Q6 DPYSL4 Dihydropyrimidinase-related protein 4 yes no 0 1 0 3 0 1 51.009 51.079 3 3.4413E-08 14608 20230619_1882_Aki_TMTPro18x_K_F3 133.23 112.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18230 2811 17264 34564 27682 27682 1677 1 9606 Homo sapiens -0.058340603379747336 MDENEFVAVTSTNAAK Unmodified 1725.788 0.7879649 2811 O14531;D3DRG7;Q5T0Q6 DPYSL4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 4.5 0.5 1 1 55.499 55.537 3 4.8511E-11 16450 20230619_1883_Aki_TMTPro18x_K_F4 151.38 141.82 76199 67017 85488 75518 73110 116760 89850 77587 104270 80239 81840 90498 93931 74934 81891 94760 93657 91145 70563 61417 85873 76112 77643 113960 90050 82064 104450 81352 85612 90871 94899 78867 84202 94670 89479 86618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207740000 18231 2811 17264 34565;34566 27683 27683 1 9606 Homo sapiens -0.045897564753659026 MDENQFVAVTSTNAAK Oxidation (M) 1740.7989 0.79886394 1284;1217;3880;2441;4185 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;B4DLZ4;H0YBT4;A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q8NAN9;B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2;Q86U75 DPYSL3;DPYSL2;CRMP1 Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 1 no no 0 1 0 5.25 0.829 1 1 2 49.307 49.375 3 2.7223E-08 13307 20230619_1885_Aki_TMTPro18x_K_F5 130.02 123.13 451530 368760 395510 449210 420230 374110 475600 456020 477560 527460 533160 545020 587320 521820 563880 619980 570050 607740 417090 338280 407030 446170 435340 386210 476430 462290 488950 529610 546980 551810 596700 544120 574470 620630 545620 577230 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2323800000 18232 1217;1284;2441;3880;4185 17265 34567;34568;34569;34570 27684;27685;27686;27687 27685 755 4 9606 Homo sapiens -0.041903541010697154 MDENQFVAVTSTNAAK Unmodified 1724.8039 0.80394931 1284;1217;3880;2441;4185 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;B4DLZ4;H0YBT4;A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q8NAN9;B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2;Q86U75 DPYSL3;DPYSL2;CRMP1 Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 1 no no 0 0 0 5.5 0.957 1 2 2 1 53.452 53.514 2;3 5.1376E-77 15396 20230619_1886_Aki_TMTPro18x_K_F6 352.53 304.53 145690 127010 138910 148270 110580 134690 142320 130200 148000 193340 185380 182520 185160 173300 193920 206920 199320 208600 134720 116440 141310 147840 118050 137150 141900 135080 152130 191630 188470 185460 189490 180800 197410 207460 190720 198080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4613700000 18233 1217;1284;2441;3880;4185 17265 34571;34572;34573;34574;34575;34576 27688;27689;27690 27689 3 9606 Homo sapiens -0.02946050238438147 MDEPSPLAQPLELNQHSR Acetyl (Protein N-term) 2103.0055 0.0055026685 3833 Q13085;A2NX49;A0A0C4DGT1;A0A087X126;A0A087X2F8 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 1 0 0 2 0 1 55.849 55.867 2 5.1071E-06 16942 20230619_1881_Aki_TMTPro18x_K_F2 86.772 78.259 5932.4 4084.6 3354.6 6092.4 6309.7 7001.8 5627.3 5826.6 5845.4 6063.1 6062.2 7643.9 8673.9 6724.4 5562.8 7118.8 8856.3 8282.6 5460.4 3758 3683.3 5991.2 6308.6 6981.6 5717.9 6041.2 5958.4 6163.1 6332 7651.9 8620.5 6991.4 5900.7 7208.2 8437.9 7856.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19082000 18234 3833 17266 34577 27691 27691 1 9606 Homo sapiens -0.0018798627274918545 MDEQALLGLNPNADSDFR Acetyl (Protein N-term) 2046.9317 0.93166902 2146 A8KA19;O43592;F8WDU6;F5GYW6 XPOT Exportin-T yes no 1 0 0 2 0 1 64.945 64.952 2 3.0214E-18 20793 20230619_1881_Aki_TMTPro18x_K_F2 119.21 105.31 2758.2 2702.7 2818.3 3460.2 3164.5 3740.6 3542.4 3292.8 3348.7 4634 3819.7 3156 5090.3 5106.3 3307.3 5294.3 2884.9 4203.9 2554.1 2479.1 2867.7 3434.4 3270.1 3750.5 3543.8 3430.6 3449.9 4567.5 3946.6 3340.8 5073.7 5209.4 3382.9 5251.2 2773.5 3999.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13185000 18235 2146 17267 34578 27692 27692 1 9606 Homo sapiens -0.049919544350586875 MDERPIHAEPQYPVR Oxidation (M) 1852.889 0.88901635 704 C9J126;A0A024RC42;P19022-2;P19022;A0A6Q8PHJ8;A0A6Q8PG20 CDH2 Cadherin-2 yes no 0 1 1 3.5 0.5 1 1 34.779 34.835 4 7.0372E-05 7489 20230619_1882_Aki_TMTPro18x_K_F3 109.55 97.407 51127 36353 51500 53836 59856 63812 57617 62572 62625 69995 79653 67956 82867 68045 66716 63619 76076 72691 47240 33439 52420 53046 61432 63726 58415 64179 64229 70270 80965 69104 83675 69988 68620 64533 72675 68959 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 62048000 18236 704 17268 34579;34580 27693;27694 27693 426 2 9606 Homo sapiens -0.0033125998199921014 MDETDASSAVK Oxidation (M) 1168.4918 0.49178288 291 Q13148;A0A0A0N0L3;A0A024R4E2;A0A0A0N0N3;A0A087WYY0;A0A087X260;G3V162;B1AKP7;K7EN94;A0A0A0N0M3;A0A087WX29;K7EJM5;B4DRW3 TARDBP;TDP43 TAR DNA-binding protein 43 yes no 0 1 0 2 0 1 37.843 37.907 3 9.9454E-05 8856 20230619_1881_Aki_TMTPro18x_K_F2 110.39 105.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18237 291 17269 34581 27695 27695 175 1 9606 Homo sapiens -0.08572334192422204 MDETDASSAVK Unmodified 1152.4969 0.49686826 291 Q13148;A0A0A0N0L3;A0A024R4E2;A0A0A0N0N3;A0A087WYY0;A0A087X260;G3V162;B1AKP7;K7EN94;A0A0A0N0M3;A0A087WX29;K7EJM5;B4DRW3 TARDBP;TDP43 TAR DNA-binding protein 43 yes no 0 0 0 2 0 1 42.802 42.883 2 2.3257E-24 11151 20230619_1881_Aki_TMTPro18x_K_F2 209.1 162.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18238 291 17269 34582 27696 27696 1 9606 Homo sapiens -0.07328030329790636 MDEVLYSIAEK Unmodified 1296.6272 0.62715415 3159 K7EPA6;K7EJU2;K7EMX5;O14835;K7ES07;P83876 TXNL4A Thioredoxin-like protein 4A yes no 0 0 0 5 0 1 63.025 63.072 3 0.0022021 19349 20230619_1885_Aki_TMTPro18x_K_F5 66.267 53.066 74236 71166 87746 79746 80637 91325 85297 85483 89886 98874 109850 97227 102410 87067 109270 104470 103700 104230 68821 65197 87855 80028 84419 91355 85937 88082 92135 99142 111380 98486 105060 91074 110660 104710 99274 99001 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30924000 18239 3159 17270 34583 27697 27697 1 9606 Homo sapiens -0.009294343307828967 MDFEDDYTHSACR Acetyl (Protein N-term);Oxidation (M) 1703.6192 0.61918501 4029 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-2;E2QRN4 ZNF326 DBIRD complex subunit ZNF326 yes no 1 1 0 1 0 1 42.55 42.55 2 1.387E-15 11188 20230619_1880_Aki_TMTPro18x_K_F1 191.48 191.48 14694 13533 14942 12208 13877 16028 14813 18283 16851 18094 21616 16221 22574 18769 18307 20604 25041 19065 13599 12377 15125 12510 14531 15976 14963 18497 17244 18237 21954 16668 22806 19377 19072 20585 23852 18146 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27867000 18240 4029 17271 34584 27698 27698 2657 1 9606 Homo sapiens -0.20447981380516467 MDFILSHAVYCR Unmodified 1510.7061 0.70608995 2154 A8KAK1;Q9NYU2-2;Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 3 0 1 58.602 58.633 3 2.1213E-13 17863 20230619_1882_Aki_TMTPro18x_K_F3 174.42 156.11 27380 17714 22843 21982 20773 26074 27764 22996 29741 27189 27119 25661 30271 22731 28556 32464 26593 25822 25250 16269 23552 21906 21962 25978 27638 23828 30077 27218 28080 26037 30690 24064 28982 32085 25458 24599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21443000 18241 2154 17272 34585 27699 27699 1 9606 Homo sapiens -0.02883485577490319 MDFLLGNPFSSPVGQR Acetyl (Protein N-term) 1805.8771 0.87705468 2517 O60784-2;O60784;O60784-3;B4DKQ5;B0QY01;Q6UW50;H7BYN7;F8WAW7;F8WBB0;F8WE29;F8WB30 TOM1 Target of Myb protein 1 yes no 1 0 0 1.5 0.5 1 1 68.559 68.562 2 2.3317E-11 21861 20230619_1880_Aki_TMTPro18x_K_F1 134.75 120.98 1304.3 809.52 0 0 0 0 966.39 0 0 1378.2 0 1960.2 0 916.57 3606.3 1473.9 0 0 1194.2 736.15 0 0 0 0 884.89 0 0 1333.3 0 1918.7 0 1001.4 3393.1 1392.3 0 0 1 1 0 0 0 0 1 0 0 1 0 1 0 1 2 1 0 0 7929300 18242 2517 17273 34586;34587 27700;27701 27700 2 9606 Homo sapiens 0.00635123274810212 MDFLLGNPFSSPVGQR Acetyl (Protein N-term);Oxidation (M) 1821.872 0.8719693 2517 O60784-2;O60784;O60784-3;B4DKQ5;B0QY01;Q6UW50;H7BYN7;F8WAW7;F8WBB0;F8WE29;F8WB30 TOM1 Target of Myb protein 1 yes no 1 1 0 8 0 1 65.811 65.83 2 1.1349E-11 20289 20230619_1888_Aki_TMTPro18x_K_F8 134.75 124.23 2618.6 997.2 2079.8 2589.9 2561.6 1636.1 2920.5 2389.6 2432.2 3067.4 3657.7 1928.4 4498.8 3101.1 2694 2718.6 2027.1 4038.6 2409.2 929.01 2166.8 2469.4 2622.2 1744.8 2908.1 2409.3 2556.7 3028.7 3718.2 2055 4471 3147.6 2735.3 2811.6 1959.9 3814.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5379600 18243 2517 17273 34588 27702 27702 1537 1 9606 Homo sapiens -0.006091805878213563 MDFQHRPGGK Acetyl (Protein N-term);Oxidation (M) 1229.5611 0.56114027 3804 Q15428;Q05DF2;K7EMT0 SF3A2 Splicing factor 3A subunit 2 yes no 1 1 1 4.8 1.17 1 1 1 2 31.958 32.015 3 0.0012363 6312 20230619_1885_Aki_TMTPro18x_K_F5 73.067 60.44 234070 208380 221980 229590 270350 283810 268470 262960 300390 265600 333890 311480 304940 253640 293990 318980 323460 310270 216460 190920 227270 230910 276860 282500 271800 270150 305350 269720 339580 312360 311580 266960 300910 318950 309110 294840 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 358820000 18244 3804 17274 34589;34590;34591;34592;34593 27703;27704;27705;27706;27707 27704 2481 5 9606 Homo sapiens -0.04445785662301205 MDFQHRPGGK Acetyl (Protein N-term) 1213.5662 0.56622565 3804 Q15428;Q05DF2;K7EMT0 SF3A2 Splicing factor 3A subunit 2 yes no 1 0 1 6 0.816 1 1 1 37.694 37.778 3 0.0015576 8664 20230619_1886_Aki_TMTPro18x_K_F6 87.913 68.67 113960 89712 103730 110910 105020 121120 113720 107220 135620 134710 129900 124720 154990 114470 133250 156590 150200 150690 105270 82322 106290 110390 109310 121380 114830 111250 136760 134390 134600 126770 156250 120730 136940 156280 143550 143190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 244200000 18245 3804 17274 34594;34595;34596 27708;27709 27708 2 9606 Homo sapiens -0.03201481799692374 MDGAGAEEVLAPLR Acetyl (Protein N-term) 1469.7184 0.71842877 3576 P41250-2 GARS Glycine--tRNA ligase yes yes 1 0 0 1.5 0.5 1 1 63.124 63.129 2 1.7477999999999999E-28 19758 20230619_1880_Aki_TMTPro18x_K_F1 133.81 121.18 13576 10835 14586 15096 10537 15347 12742 12241 9594.2 17618 14018 12171 18822 14449 17668 18357 16822 18059 12559 9954.7 14677 14893 11341 15417 12637 12867 10173 17342 14379 12687 18988 15050 17943 18365 16112 17151 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171220000 18246 3576 17275 34597;34598 27710 27710 1 9606 Homo sapiens 0.002358293665565725 MDGGDDGNLIIK Acetyl (Protein N-term);Oxidation (M) 1304.5918 0.59183127 411 H3BN22;Q6P4H7;H3BSF0;H3BQQ6;H3BTI2;H3BTP8;H3BSY6;H3BP64;H3BUL4;H3BMX9;A0A024R6T8;Q9GZU8;H3BPH9;H3BPF9 FAM192A;NIP30 Protein FAM192A yes no 1 1 0 1 0 1 55.649 55.649 2 0.0011827 16672 20230619_1880_Aki_TMTPro18x_K_F1 41.427 25.202 44454 37131 42770 49884 49022 54135 50281 49342 52817 57625 50598 53834 59248 49995 54000 59436 54916 56342 41098 34095 43725 49365 50458 54303 50705 50965 53636 57675 52427 54676 59941 52200 55084 59392 52545 53541 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49473000 18247 411 17276 34599 27711 27711 261 1 9606 Homo sapiens -0.0482809685859138 MDGIVPDIAVGTK Acetyl (Protein N-term);Oxidation (M) 1372.6908 0.69081704 1159 P26599;P26599-2;A0A0U1RRM4;P26599-1;A0A0D9SF20;A0A7I2V4H6;A0A6Q8PEX4;K7EKJ7 PTBP1 Polypyrimidine tract-binding protein 1 yes no 1 1 0 3.5 0.5 1 1 62.036 62.053 2 1.7394E-07 19191 20230619_1883_Aki_TMTPro18x_K_F4 111.06 84.455 448750 367250 349550 443920 461610 417200 452120 441140 435520 441100 520430 494270 505150 429950 478540 545040 477090 527920 414190 336880 365480 441620 469740 424760 455920 449190 448040 447300 529180 497530 514700 451640 487400 544720 456840 501420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 870790000 18248 1159 17277 34600;34601 27712;27713;27714 27713 709 3 9606 Homo sapiens 0.019379261062795194 MDGIVPDIAVGTK Acetyl (Protein N-term) 1356.6959 0.69590241 1159 P26599;P26599-2;A0A0U1RRM4;P26599-1;A0A0D9SF20;A0A7I2V4H6;A0A6Q8PEX4;K7EKJ7 PTBP1 Polypyrimidine tract-binding protein 1 yes no 1 0 0 4 0.816 1 1 1 64.555 64.583 2 7.7232E-06 20236 20230619_1883_Aki_TMTPro18x_K_F4 102.06 83.331 543750 461210 527970 539600 398270 579110 559460 591810 533170 640250 554030 626270 707470 562770 605540 744360 677760 714390 502790 422870 535960 539200 429220 582590 554270 604890 546220 643710 574750 634180 712130 592390 622300 742990 648030 678720 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2643600000 18249 1159 17277 34602;34603;34604 27715;27716;27717;27718 27716 4 9606 Homo sapiens 0.031822299688883504 MDGLLNPR Acetyl (Protein N-term) 956.47495 0.47495102 4062 Q5T6V5 C9orf64 UPF0553 protein C9orf64 yes yes 1 0 0 3 0 1 58.148 58.178 2 0.00074941 17664 20230619_1882_Aki_TMTPro18x_K_F3 125.86 78.791 6932.7 4225.5 6057.8 5616 5625.8 5495.2 6134.2 7971.8 8574 6713.2 7147.9 6049.6 6310.8 6923.7 6584.6 8117.8 6519.1 8680.2 6393.6 3884.8 6215.8 5560.2 5892.4 5622.9 6236 7931.6 8532.6 6833.8 7356.9 6210.6 6491.7 7171.5 6697.1 8164.9 6253 8230.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7982000 18250 4062 17278 34605 27719 27719 1 9606 Homo sapiens -0.005027454970331746 MDGMTIK Unmodified 794.36665 0.36664613 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DYA2;H0YHU8 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 0 7 0 1 48.925 49.011 2 0.0057088 13137 20230619_1887_Aki_TMTPro18x_K_F7 112.17 7.0548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18251 1555 17279 34606 27720 27720 1 9606 Homo sapiens -0.038762530718031485 MDGPGYGDEEEPLHTILGK Unmodified 2056.9412 0.94117108 801 A0A087WT20;Q9NV06;A0A087X1F8;B3KME9;E5RHM4 DCAF13 DDB1- and CUL4-associated factor 13 yes no 0 0 0 4 0 1 59.882 59.884 3 4.4516E-05 18295 20230619_1883_Aki_TMTPro18x_K_F4 89.982 82.767 32367 22283 29667 36463 27894 31935 33938 33962 43152 42086 46151 42033 46102 38309 37644 42170 45271 50936 29878 20525 30378 35574 29304 32664 34157 34783 43549 42101 47166 42555 46647 39867 38876 42791 43280 48265 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65101000 18252 801 17280 34607 27721;27722 27721 2 9606 Homo sapiens -0.04502186149557019 MDGPVAEHAK Acetyl (Protein N-term);Oxidation (M) 1111.4968 0.49680868 683 F8VZ97;A0A024RBL2;Q96GA7 SDSL Serine dehydratase-like yes no 1 1 0 1 0 1 33.797 33.797 2 0.00097842 7528 20230619_1880_Aki_TMTPro18x_K_F1 56.563 50.737 5458.9 2861 3382.8 6202 7178.2 8456.4 9697 9556.2 10575 6519.5 7129 8392.7 8384.3 8031.5 6491.1 5561.2 10142 8788.5 5020.5 2650.4 3688.7 6008.5 7231.1 8394.5 9644.7 9602.9 10572 6814.9 7539.3 8416.1 8438.8 8166.1 6828.6 5813.6 9659.4 8318.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3463300 18253 683 17281 34608 27723 27723 420 1 9606 Homo sapiens -0.05447985539149158 MDIETNDTFSDEAVPESSK Unmodified 2113.8998 0.89975977 1813 O60934;A0A8V8TM88;A0A8V8TM80;A6H8Y5;A8K1D3;A0A8V8TKW6;A0A8V8TMH1;A0A8V8TMH6;A0A8V8TM94;A0A0C4DG07;A0A8V8TKY5;A0A087X1V5 NBN Nibrin yes no 0 0 0 2 0 1 55.764 55.785 3 2.4354E-07 16922 20230619_1881_Aki_TMTPro18x_K_F2 108.71 94.241 9279.6 8112.7 9461.7 10090 8562.2 9954.9 8315.3 9565.2 13165 9481.5 8665.7 10577 13284 9904 10971 11719 13128 15717 8585.6 7442 9585.3 10026 8971.8 10067 8552.3 9796.3 12954 9629.3 9316.5 10662 13296 10348 11320 11967 12558 14877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10156000 18254 1813 17282 34609 27724 27724 1 9606 Homo sapiens -0.1126341169956504 MDKNELVQK Acetyl (Protein N-term);Oxidation (M) 1161.57 0.56997362 2805 D0PNI1;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1 YWHAZ 14-3-3 protein zeta/delta yes no 1 1 1 4 0 1 43.809 43.853 2 0.0083953 11194 20230619_1883_Aki_TMTPro18x_K_F4 46.994 6.9926 98906 110670 136640 115360 189130 105340 164990 119350 57076 108330 163910 40254 36826 22859 230640 13526 12747 7712.8 91954 101280 136210 116120 190420 107960 164460 120780 68555 107810 157130 43668 50441 23761 217910 14133 14268 7405.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77738000 18255 2805 17284 34610 27725 27725 1676 1 9606 Homo sapiens -0.004348568164914468 MDLFGDLPEPER Acetyl (Protein N-term) 1459.6653 0.66533057 4493 Q9H0C8;F8SNU7;E9PC05;F8SNU6;B8Y6Z5;B8Y6Z6 ILKAP;ILKAP3;ILKAP2 Integrin-linked kinase-associated serine/threonine phosphatase 2C yes no 1 0 0 1 0 1 65.991 65.991 2 1.638E-09 20913 20230619_1880_Aki_TMTPro18x_K_F1 159.4 147.18 1590.3 1455.2 1809.7 3038 2593.3 3749.7 2322 3773.3 2189.7 3141.2 3427 2412.4 3917 2287 2251.5 3321.6 3696.7 3789.3 1473.3 1343.8 1840.5 2942.2 2630.1 3732.1 2357.3 3830.8 2292.2 3182.8 3470.1 2483.4 3896.3 2424.8 2404.4 3343.3 3523.6 3593.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23184000 18256 4493 17285 34611 27726 27726 1 9606 Homo sapiens -0.046115484161646236 MDLFSALIK Unmodified 1036.5627 0.5627034 4481 Q9C0C9;K7ES11 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 0 0 0 3 0 1 64.742 64.774 3 0.012708 20436 20230619_1882_Aki_TMTPro18x_K_F3 74.376 33.389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18257 4481 17286 34612 27727 27727 1 9606 Homo sapiens 0.04588455373709621 MDLGECLK Unmodified 964.43579 0.43578832 4715 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 0 0 0 5 0.816 2 2 2 52.745 52.802 2;3 0.00712 15257 20230619_1883_Aki_TMTPro18x_K_F4 84.368 67.075 746570 617070 671760 657350 630570 784080 742950 701600 813210 853000 820080 804850 976220 747490 715070 995780 911180 871960 689800 565340 688030 662550 662150 781410 744840 726500 825260 852560 847560 817620 978560 786340 744080 988910 869640 829650 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 798810000 18258 4715 17287 34613;34614;34615;34616;34617;34618 27728;27729;27730 27729 3 9606 Homo sapiens -0.047852138428993385 MDLGECLK Oxidation (M) 980.4307 0.43070295 4715 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 0 1 0 4 0 1 46.449 46.493 3 0.027872 12378 20230619_1883_Aki_TMTPro18x_K_F4 59.35 47.124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18259 4715 17287 34619 27731 27731 2877 1 9606 Homo sapiens -0.06029517705519538 MDLNSEQAEQLER Oxidation (M) 1577.6991 0.69914989 3982 Q52LJ0;Q52LJ0-1 FAM98B Protein FAM98B yes no 0 1 0 1 0 1 41.401 41.401 2 1.6599E-10 10710 20230619_1880_Aki_TMTPro18x_K_F1 177.41 165.2 25315 21561 24468 25999 27014 29084 29690 26973 27641 30046 32562 29977 29247 26010 30440 31110 31094 33121 23408 19774 24975 25933 27914 29132 29718 27791 28479 30193 33023 30311 30016 27231 30974 31292 29758 31430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54159000 18260 3982 17288 34620 27732 27732 2633 1 9606 Homo sapiens -0.06659171715023149 MDLNSEQAEQLER Unmodified 1561.7042 0.70423527 3982 Q52LJ0;Q52LJ0-1 FAM98B Protein FAM98B yes no 0 0 0 1 0 1 47.422 47.422 2 3.7528999999999997E-28 13300 20230619_1880_Aki_TMTPro18x_K_F1 263.57 245.51 39525 31197 40438 38894 35108 45240 46228 38499 42078 45528 50622 53891 51455 41125 48590 56016 59923 57837 36546 28630 40926 38733 37214 45096 45837 40013 43447 45881 51604 53900 52345 43638 50125 56129 57210 54923 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114700000 18261 3982 17288 34621 27733 27733 1 9606 Homo sapiens -0.054148678523915805 MDLSGVK Acetyl (Protein N-term) 790.38949 0.38949006 2826 Q15287;D3DU92;H3BTC0;H3BMM9;H3BV80;A0A024R9P1;H3BTV0;H3BRK4;H3BUL0;H3BNU7;H3BUG0;H3BTR6;H3BP82;H3BNI3;H3BTY0 RNPS1;hCG_2026745 RNA-binding protein with serine-rich domain 1 yes no 1 0 0 3 0 1 55.894 55.935 2 0.025822 16751 20230619_1882_Aki_TMTPro18x_K_F3 57.559 36.013 103330 89991 91361 98914 91448 115310 103050 110040 125100 107500 113810 104700 108950 91983 99507 114370 114940 113910 95493 82456 93868 99404 95467 115220 103930 112680 125690 108720 117020 106040 110920 96497 102290 114510 109820 108200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47076000 18262 2826 17290 34622 27734 27734 1 9606 Homo sapiens -0.014089106826872921 MDLVTYFGK Oxidation (M) 1088.5212 0.52123251 160 A0A024R1T5;P09543-2;P09543;B4DI06;B4DFN6 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes no 0 1 0 1 0 1 58.917 58.917 2 0.063828 18107 20230619_1880_Aki_TMTPro18x_K_F1 61.679 40.379 23678 20517 27345 27818 28453 30608 26972 29942 30372 29011 33776 28367 31640 28509 29043 29543 34422 35866 21931 18839 27489 27528 29413 30721 27409 30601 30880 29353 34362 28855 32249 29465 29878 30024 32893 33993 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24920000 18263 160 17291 34623 27735 27735 90 1 9606 Homo sapiens -0.01948725385614125 MDMSLDDIIK 2 Oxidation (M) 1211.5414 0.54137561 4189 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 2 0 3 0 1 54.025 54.077 2 0.039078 15984 20230619_1882_Aki_TMTPro18x_K_F3 64.711 39.053 42685 31745 30883 46287 43660 41943 40548 43137 51698 42065 58333 49947 53129 51035 38971 63863 57595 56906 39357 29189 32629 45456 44255 42773 41410 43972 52244 42836 59224 50473 53771 53241 41045 63507 54922 54126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60189000 18264 4189 17292 34624 27736 27736 2693;2694 1 9606 Homo sapiens -0.05593342507950183 MDMSLDDIIK Oxidation (M) 1195.5465 0.54646099 4189 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 1 0 3.5 0.5 1 1 59.302 59.304 2;3 0.00071014 18021 20230619_1883_Aki_TMTPro18x_K_F4 94.309 77.677 62595 44004 51345 64305 53113 59538 58635 66722 66677 87000 81903 90641 112730 91128 68427 121180 109510 116070 57742 40472 53197 63183 55221 60713 59088 68191 68211 86912 84672 91900 111980 95591 72920 120830 104420 110280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220620000 18265 4189 17292 34625;34626 27737;27738 27738 2693;2694 2 9606 Homo sapiens -0.04349038645341352 MDMSLDDIIK Unmodified 1179.5515 0.55154636 4189 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 0 0 5 0 1 62.612 62.659 3 0.00018749 19119 20230619_1885_Aki_TMTPro18x_K_F5 119.16 86.657 83881 67075 84970 102550 65960 102560 91633 91599 117620 125240 102580 115010 137650 113950 92559 151510 134020 147330 77560 61692 86087 100570 70976 103350 91713 95250 117860 124490 107520 117170 137270 119590 97532 151230 127920 139930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131340000 18266 4189 17292 34627 27739 27739 1 9606 Homo sapiens -0.03104734782732521 MDMTSPEQSR Oxidation (M) 1196.4802 0.48017233 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 1 0 2 0 1 32.292 32.353 2 0.0070461 6608 20230619_1881_Aki_TMTPro18x_K_F2 80.455 73.922 11219 7189.1 8692.6 8733.7 11238 11340 10965 11254 13773 11502 11378 12926 13803 11752 12075 14678 15233 13275 10340 6601.7 9077.7 8729.8 11467 11270 11156 11506 13776 11660 11903 13018 13934 12312 12497 14618 14531 12631 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12993000 18267 4372 17293 34628 27740 27740 2751 1 9606 Homo sapiens -0.11020854487401266 MDNYADLSDTELTTLLR Acetyl (Protein N-term);Oxidation (M) 2027.9358 0.93575135 3617 P50402;A0A804HIV7;Q5HY57;A0A804HLA2;F8WEQ1;A0A804HIG7 EMD Emerin yes no 1 1 0 1.5 0.5 1 1 65.474 65.478 2 1.2114E-23 21005 20230619_1881_Aki_TMTPro18x_K_F2 163.99 154.1 2692.4 2717.2 2385.8 2250.4 722.36 2485.1 2125.4 2017.4 2440.6 2184.2 3731.2 3579.2 4591.9 2549.9 3440.4 2570.3 3761.2 4173.7 2490.9 2483 2425.3 2317.1 820.92 2482.5 2073.8 2099.5 2515.2 2136.7 3802.8 3536 4593.9 2673.2 3531.3 2674.7 3598.5 3945.7 2 2 2 2 1 2 2 2 2 1 2 2 2 2 2 2 2 2 27204000 18268 3617 17294 34629;34630 27741;27742 27742 2297 2 9606 Homo sapiens -0.03709909732037886 MDNYADLSDTELTTLLR Acetyl (Protein N-term) 2011.9408 0.94083673 3617 P50402;A0A804HIV7;Q5HY57;A0A804HLA2;F8WEQ1;A0A804HIG7 EMD Emerin yes no 1 0 0 2 0.816 1 1 1 66.772 66.786 2 1.2535E-06 21270 20230619_1882_Aki_TMTPro18x_K_F3 116.24 113.45 0 1297.5 2377.6 0 1736.9 0 749.43 1146.4 939.69 3237.5 840.95 1351.6 2821.2 2856.4 2276.2 1233.2 1923 1067.9 0 1174 2179.4 0 1738.5 0 774.31 1108.6 919.28 3097.7 783.09 1406.6 2690.3 2805.3 2280.1 1239.9 1837.4 1015.9 0 1 2 0 2 0 1 1 1 2 1 1 2 2 2 1 2 1 17239000 18269 3617 17294 34631;34632;34633 27743;27744;27745 27745 3 9606 Homo sapiens -0.024656058694063177 MDPECAQLLPALCAVLVDPR Acetyl (Protein N-term) 2309.1218 0.12179475 4129 Q6PJG6;F8WDN5;Q6PJG6-2 BRAT1 BRCA1-associated ATM activator 1 no no 1 0 0 5 0 1 68.691 68.734 3 1 NaN NaN 840.78 1318.4 2039.7 1762.2 0 2106.1 1120 1132.7 2631.3 2579.4 2518.5 1192.7 1415.7 1846.8 2583.4 1819.6 1920.3 1018.8 791.07 1208.4 1942.4 1747 0 2075.7 1113 1262.7 2587.8 2490.3 2532.9 1298.6 1539.1 1879.2 2565.4 1787.5 1837.5 979.41 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 2122200 18270 4129 17295 34634 0 9606 Homo sapiens 0.019598729112658475 MDPMNIWDDIITNR Unmodified 1732.7913 0.79127614 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 6.5 1.12 1 1 1 1 65.921 65.954 3 8.666200000000001E-29 20476 20230619_1887_Aki_TMTPro18x_K_F7 201.76 188.35 35431 33075 38205 40219 29789 38246 43194 39562 36885 49479 40438 44455 46105 37940 43391 47612 43107 50263 32812 30327 38477 40011 31974 38846 42588 40604 38145 49288 41611 45107 46733 39881 44181 47825 41297 47686 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 195350000 18271 3758 17296 34635;34636;34637;34638 27746;27747 27747 2 9606 Homo sapiens -0.04580784902350388 MDPNTIIEALR Acetyl (Protein N-term);Oxidation (M) 1329.6599 0.65985126 3354 O95373;E9PLJ0 IPO7 Importin-7 yes no 1 1 0 2.75 0.829 2 1 1 63.042 63.06 2 1.6126E-07 20013 20230619_1881_Aki_TMTPro18x_K_F2 131.44 102.93 19022 17033 17020 22165 17087 21041 22584 22764 26420 23334 22890 21290 27647 20124 19909 27587 20857 28412 17584 15631 17494 21941 17915 21394 22565 23153 26552 23494 23840 21685 27674 21213 20479 27622 19999 26949 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162010000 18272 3354 17297 34639;34640;34641;34642 27748;27749;27750 27749 1961 3 9606 Homo sapiens 0.008207727920762409 MDPNTIIEALR Acetyl (Protein N-term) 1313.6649 0.66493664 3354 O95373;E9PLJ0 IPO7 Importin-7 yes no 1 0 0 4.5 1.12 1 1 1 1 66.519 66.553 2 3.8005E-13 20994 20230619_1883_Aki_TMTPro18x_K_F4 178.27 137.15 10359 7338.7 8636.5 5795 7234.5 8123.5 9295 6613 12811 10408 10321 13915 10214 9338 9716.4 10934 11285 13014 9557.6 6707.5 8878.5 6004.8 7692.4 8011.8 9353.9 6817.8 12745 10429 10725 13793 10412 9864.6 9982.9 11075 10794 12332 3 2 3 2 3 3 3 2 3 3 3 3 3 3 3 3 3 3 119250000 18273 3354 17297 34643;34644;34645;34646 27751;27752;27753 27752 3 9606 Homo sapiens 0.020650766547078092 MDPVPGTDSAPLAGLAWSSASAPPPR Acetyl (Protein N-term) 2589.2533 0.25333751 463 E9PJW8;E9PQA6;A8K0C2;A0A024R7L6;Q96EY5-2;Q96EY5-3;Q96EY5 MVB12A;LOC93343 Multivesicular body subunit 12A yes no 1 0 0 6 0 1 65.256 65.301 3 9.1998E-14 20493 20230619_1886_Aki_TMTPro18x_K_F6 119.33 113.9 3297.7 3335.1 2664.9 3791.8 3770.3 4763.9 4141.3 3590.3 4365.7 5242.8 4339.1 4602.8 6055.5 3388.1 6268.2 4558.7 5634.4 7094.2 3048.9 3055.3 2784.7 3802.2 3844.6 4716.1 4158 3794 4441.9 5189.5 4532.9 4656.3 6122.9 3610.9 6325.7 4707.7 5407.2 6705.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26326000 18274 463 17298 34647 27754 27754 1 9606 Homo sapiens 0.022280978043909272 MDQAIIFCR Unmodified 1152.542 0.54198473 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 4.5 3.5 1 1 54.55 54.583 2 6.1331E-05 15533 20230619_1888_Aki_TMTPro18x_K_F8 161.92 139.09 306850 240710 278520 296380 244700 321550 318540 314520 354930 339430 313730 324490 349550 293150 356100 397780 360860 345240 283450 220870 284970 295100 259320 322950 318030 322470 357930 341280 325580 329120 355940 308920 362480 395000 345110 328520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 338200000 18275 1661 17299 34648;34649 27755;27756 27756 2 9606 Homo sapiens -0.02818458277602076 MDQAIIFCR Oxidation (M) 1168.5369 0.53689935 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 1 0 6.5 1.12 1 1 1 1 47.862 47.938 2 0.0018985 12980 20230619_1886_Aki_TMTPro18x_K_F6 105.94 86.159 99225 94696 91531 104770 109040 98995 109360 111940 118390 109730 112490 101330 111430 91437 107770 126420 110070 110110 91788 86744 93938 104940 111730 100930 110530 113400 119870 110750 115580 103010 113560 96497 109880 125510 105290 104760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134270000 18276 1661 17299 34650;34651;34652;34653 27757 27757 1080 1 9606 Homo sapiens -0.040627621402336445 MDQDSLSSSLK Unmodified 1209.5547 0.55471749 3562 Q6IAX1;P37268-5;P37268;E9PJG4 FDFT1 Squalene synthase yes no 0 0 0 5 0 1 50.003 50.079 3 0.00018524 13792 20230619_1885_Aki_TMTPro18x_K_F5 112.51 79.983 88192 65296 75506 75890 58157 61273 75483 78699 86267 88608 89218 69252 98532 67934 60574 125340 103250 88509 81403 59896 77488 75631 62264 63499 75481 79455 87409 88410 91613 71321 98402 73190 64977 122760 98279 84510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144220000 18277 3562 17300 34654 27758 27758 1 9606 Homo sapiens -0.04167768404340677 MDQTSSEIVR Oxidation (M) 1180.5394 0.53940177 1822 A0A8V8TNN2;A0A8V8TMN9;Q9BT08;E9PHH9;A0A8V8TM54;Q53F76;Q9BUI4 POLR3C DNA-directed RNA polymerase III subunit RPC3 yes no 0 1 0 2 0 1 34.157 34.214 2 0.0002526 7371 20230619_1881_Aki_TMTPro18x_K_F2 131.12 98.273 13788 10184 11034 13534 18039 18208 15145 17126 25108 12608 16202 15781 20422 13863 13385 15360 21911 20030 12721 9354.7 11556 13447 18120 18032 15736 17442 24620 13107 17211 15822 20363 14465 14213 15666 20869 18982 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11529000 18278 1822 17301 34655 27759 27759 1167 1 9606 Homo sapiens -0.043646352015457524 MDQVMQFVEPSR Acetyl (Protein N-term) 1507.6799 0.67993477 17 A0A024QYZ0;P60059 SEC61G Protein transport protein Sec61 subunit gamma yes no 1 0 0 3.5 0.5 1 1 65.34 65.362 2 1.689E-17 20536 20230619_1883_Aki_TMTPro18x_K_F4 182.16 160.47 9906.2 9479.6 10393 11117 11432 16429 13127 10926 17402 9715.8 10287 12866 11758 9728.9 15116 9782 10962 12709 9173.4 8688.2 10544 11157 11874 16074 13257 11518 17178 10001 10981 12800 12110 10145 15053 10011 10541 12034 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127510000 18279 17 17302 34656;34657 27760;27761 27761 2 9606 Homo sapiens -0.05359799539633059 MDQYFNQMEK 2 Oxidation (M) 1364.5377 0.53768721 1676;2901;949 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C044;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;A0A0A0MSA7;A0A8I5QJH9;A0A804HJV5;A0A8J9G7U8;A0A8I5KT99;A0A0U1RQK7;Q59GJ0;A0A8I5KV92;O43432-4;O43432;O43432-3;B4DZE1;B4DH17 EIF4G1;EIF4G1 variant protein;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 2 0 4 0 1 43.442 43.486 3 0.036119 11052 20230619_1883_Aki_TMTPro18x_K_F4 46.524 32.861 35446 25118 27658 32237 32175 39700 34323 35475 58697 38378 42620 37054 35912 38165 38744 44814 42670 39834 32689 23068 28845 32059 33224 39466 35214 36601 57694 38652 44149 37750 37066 39642 39599 44636 40769 37897 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31134000 18280 1676;2901;949 17303 34658 27762 27762 533;534 1 9606 Homo sapiens -0.1300001228180463 MDQYFNQMEK Oxidation (M) 1348.5428 0.54277259 1676;2901;949 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C044;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;A0A0A0MSA7;A0A8I5QJH9;A0A804HJV5;A0A8J9G7U8;A0A8I5KT99;A0A0U1RQK7;Q59GJ0;A0A8I5KV92;O43432-4;O43432;O43432-3;B4DZE1;B4DH17 EIF4G1;EIF4G1 variant protein;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 1 0 5 0 1 50.377 50.453 2 0.081729 13974 20230619_1885_Aki_TMTPro18x_K_F5 55.567 38.541 12145 11495 12514 15824 11587 13271 13250 11922 14393 16458 20334 17742 19944 18077 15157 19703 15030 17867 11244 10553 12687 15582 12156 13581 13304 12407 14836 16431 20541 17978 20140 18713 15517 19661 14401 16979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5548900 18281 1676;2901;949 17303 34659 27763 27763 533;534 1 9606 Homo sapiens -0.11755708419195798 MDQYFNQMEK Unmodified 1332.5479 0.54785797 1676;2901;949 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C044;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;A0A0A0MSA7;A0A8I5QJH9;A0A804HJV5;A0A8J9G7U8;A0A8I5KT99;A0A0U1RQK7;Q59GJ0;A0A8I5KV92;O43432-4;O43432;O43432-3;B4DZE1;B4DH17 EIF4G1;EIF4G1 variant protein;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 0 0 7 0 1 56.105 56.163 3 0.027245 16227 20230619_1887_Aki_TMTPro18x_K_F7 49.448 33.909 79188 65958 76582 86233 88338 87320 86141 92576 110970 96001 85468 84156 103100 80066 83433 100200 83890 93002 73211 60547 78231 85428 90732 88356 87751 94282 110650 96507 89636 85848 103680 83831 85308 99916 80324 88376 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28210000 18282 1676;2901;949 17303 34660 27764 27764 1 9606 Homo sapiens -0.1051140455656423 MDRETLIDVAR Unmodified 1317.6711 0.67108465 2549 B4DN39 yes yes 0 0 1 4 0 1 45.779 45.822 3 9.8866E-05 12083 20230619_1883_Aki_TMTPro18x_K_F4 124.21 79.442 85051 74317 92562 84462 60397 66656 86071 86169 42662 97437 103550 105840 127430 95287 102060 121940 113300 110920 78735 68114 92867 84310 65825 69233 84087 87010 48557 97963 104450 106750 127970 100090 104950 121440 108280 105480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56159000 18283 2549 17304 34661 27765 27765 1 9606 Homo sapiens 0.024955948862043442 MDSAGQDINLNSPNK Acetyl (Protein N-term);Oxidation (M) 1660.7363 0.73626368 861 Q6FGS1;Q53GA0;A0A087WYR3;O43399;O43399-5;O43399-7;Q68E05;O43399-2;O43399-4;O43399-3;A0A087WZ51;Q5J908 TPD52L2;DKFZp686A1765 Tumor protein D54 yes no 1 1 0 2 0 1 48.128 48.199 2 4.0312E-20 13599 20230619_1881_Aki_TMTPro18x_K_F2 131.28 127.75 20892 17826 22904 24632 25262 28663 25513 26291 32762 27910 29331 30516 33233 26524 26534 29691 33473 37358 19339 16372 23147 24361 26071 28615 25935 27064 32822 28212 30426 30721 33471 27681 27500 30204 31987 35387 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73145000 18284 861 17306 34662 27766 27766 504 1 9606 Homo sapiens -0.06767500169257801 MDSSREPTLGR Acetyl (Protein N-term);Oxidation (M) 1305.5983 0.59831364 3326 O76038;A0A994J4C2;Q96P10 SCGN Secretagogin yes no 1 1 1 1 0 1 30.989 30.989 2 0.05948 6347 20230619_1880_Aki_TMTPro18x_K_F1 66.621 55.748 6345.1 2808.2 10044 7644.2 13104 15309 8395.1 10167 14170 10438 11057 12409 11405 10831 12225 7732.4 13952 14511 5878.7 2615.9 9925.8 7412.6 13252 14767 8922.5 10737 13980 10609 11516 12439 11679 11067 12486 8214.5 13336 13709 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30596000 18285 3326 17307 34663 27767 27767 1954 1 9606 Homo sapiens -0.04226158907226818 MDSTANEVEAVK Unmodified 1292.5918 0.59183127 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;I3L0S0;Q96C96;B3KTQ9 P4HB Protein disulfide-isomerase yes no 0 0 0 2.5 0.5 2 2 47.975 48.05 2;3 1.0978E-23 13246 20230619_1882_Aki_TMTPro18x_K_F3 277.96 229.4 499100 375750 457690 470440 568770 618180 572170 565310 754280 627910 696060 731910 730100 601610 628540 790240 852260 733550 460960 344910 470150 469240 582400 612670 582180 582760 755430 634690 718500 734040 739410 634740 654110 787450 812450 697770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2208200000 18286 537 17308 34664;34665;34666;34667 27768;27769;27770 27769 3 9606 Homo sapiens -0.04276096858598066 MDSTEPAYSEK Oxidation (M) 1272.518 0.51799763 1378 Q05639;A0A2U3TZH3;Q59GP5;A0A2R8Y488 EEF1A2 Elongation factor 1-alpha 2 yes no 0 1 0 2 0 1 38.812 38.879 3 0.0011664 9302 20230619_1881_Aki_TMTPro18x_K_F2 85.813 72.935 58226 57899 61010 59555 48396 58674 61436 63526 70219 82355 84292 73762 83247 75141 75425 83146 96512 72951 53933 52997 61552 60048 51656 59532 61502 65053 71641 81943 85699 75347 84668 77863 78030 82848 91975 69484 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81521000 18287 1378 17309 34668 27771 27771 863 1 9606 Homo sapiens -0.10736065020932983 MDSTEPPYSQK Oxidation (M) 1297.5496 0.54963211 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;A0A4D5RA98;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;Q9H2I7;A0A4D5RA52;A0A087WV01;Q504Z0;Q53HR1;B4E2C5;Q16577;A0A4D5RA61;A0A4D5RBK4;A0A4D5RAF1;A0A4D5RBI9;A9X7H1;A0A4D5RA91;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 1 0 3.5 0.5 1 1 39.67 39.72 2 0.0058431 9496 20230619_1882_Aki_TMTPro18x_K_F3 79.489 63.86 20217 16695 19348 21090 18477 19105 17199 17501 25158 34525 37072 26864 35654 24570 13006 30034 27789 16643 18688 15320 19718 20910 19235 19443 17680 18444 25689 33737 37295 27559 35318 25721 14530 29302 26369 15990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46877000 18288 1560;3997 17310 34669;34670 27772 27772 1022 1 9606 Homo sapiens -0.08724072267000338 MDSTEPPYSQK Unmodified 1281.5547 0.55471749 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;A0A4D5RA98;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;Q9H2I7;A0A4D5RA52;A0A087WV01;Q504Z0;Q53HR1;B4E2C5;Q16577;A0A4D5RA61;A0A4D5RBK4;A0A4D5RAF1;A0A4D5RBI9;A9X7H1;A0A4D5RA91;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 4 0.816 1 1 1 44.104 44.168 3 4.3881E-05 11322 20230619_1883_Aki_TMTPro18x_K_F4 103.69 83.566 125030 106530 133310 131700 101850 117650 127630 122230 173500 193580 172620 137780 189520 142600 112870 175790 172200 109860 115700 97728 134250 130790 109060 120160 128650 126460 174260 190130 177510 142620 189160 148720 119720 172280 163750 105270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285210000 18289 1560;3997 17310 34671;34672;34673 27773 27773 1 9606 Homo sapiens -0.0747976840436877 MDSTLTASEIR Acetyl (Protein N-term);Oxidation (M) 1280.5918 0.59183127 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62;A0A6Q8PGI8;A0A6Q8PHN5 AARS Alanine--tRNA ligase, cytoplasmic yes no 1 1 0 1 0 1 44.691 44.691 2 3.268E-17 12164 20230619_1880_Aki_TMTPro18x_K_F1 186.16 159.2 17418 17280 20056 22150 22961 23920 23883 26115 29034 21784 24745 25676 24429 19569 22595 19963 27495 26796 16148 15850 20211 21993 23632 24104 24188 26406 29091 22371 25582 25675 24853 20423 23262 20446 26255 25381 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110070000 18290 1637 17311 34674 27774 27774 1063 1 9606 Homo sapiens -0.03724096858604753 MDSTLTASEIR Acetyl (Protein N-term) 1264.5969 0.59691665 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62;A0A6Q8PGI8;A0A6Q8PHN5 AARS Alanine--tRNA ligase, cytoplasmic yes no 1 0 0 1 0 1 53.232 53.232 2 5.6403E-06 15676 20230619_1880_Aki_TMTPro18x_K_F1 107.56 83.361 72336 59203 66553 74859 65774 80622 78052 69672 89698 96502 89239 100260 98578 87006 87666 108710 107190 106620 66843 54331 68141 74370 68798 80823 78331 72685 90766 96211 92065 101120 99840 91315 90529 108710 102370 101290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 383210000 18291 1637 17311 34675 27775 27775 1 9606 Homo sapiens -0.024797929959731846 MDSTNADALYVR Oxidation (M) 1370.6136 0.61362935 1609;2515 B4DKK3;Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2;K7EIH8;K7ER44;K7EK03;K7EPP7 DNAJC7 DnaJ homolog subfamily C member 7 no no 0 1 0 3 0 1 42.569 42.635 2 4.4882E-07 10757 20230619_1882_Aki_TMTPro18x_K_F3 163.84 105.61 86747 69580 79777 90188 95589 98028 82225 90207 111950 103710 114250 114060 121860 108600 92988 106900 115080 119940 80150 63875 81897 89468 97696 98371 84637 93046 112460 104450 117400 115120 122800 112110 96360 108150 109930 113770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135570000 18292 2515;1609 17312 34676 27776 27776 1049 1 9606 Homo sapiens -0.056852921100471576 MDTDLETMDLDQGGEALAPR Oxidation (M) 2192.9566 0.95656314 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9;O75643-2 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 1 0 1.5 0.5 1 1 56.937 56.945 3 4.1281E-17 17379 20230619_1881_Aki_TMTPro18x_K_F2 167.92 162.82 41332 37894 44449 45437 40502 46746 47882 46587 53743 48999 52445 47624 48851 47109 52795 59232 57958 56441 38272 34743 44845 45295 42589 47167 48041 47676 54346 49364 53694 48436 50206 49226 53937 59154 55393 53643 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35572000 18293 3312 17313 34677;34678 27777;27778 27778 1945 2 9606 Homo sapiens -0.09219687414633881 MDTDLETMDLDQGGEALAPR Unmodified 2176.9616 0.96164852 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9;O75643-2 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 1 0 1 61.224 61.224 3 4.3858E-16 18973 20230619_1880_Aki_TMTPro18x_K_F1 153.14 142.2 20505 17730 21955 22604 25579 23518 25269 22000 31690 18165 19696 21596 24200 19401 23055 23478 21522 19853 18978 16269 22235 22439 26241 23690 25678 22495 31405 18700 20987 21701 24497 20297 23380 23328 20596 18901 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29019000 18294 3312 17313 34679 27779 27779 1 9606 Homo sapiens -0.07975383552002313 MDTIDQDDELIR Oxidation (M) 1478.6559 0.65588809 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;A0A994J766;Q6P468;Q59EZ5 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase yes no 0 1 0 1 0 1 48.108 48.108 2 0.0040849 13618 20230619_1880_Aki_TMTPro18x_K_F1 82.803 57.586 16071 15870 17989 17143 17446 19211 17229 17892 17934 21295 23113 19340 22564 19525 21742 24302 23486 24829 14894 14533 18099 17245 18151 19247 17422 18457 18452 21276 23422 19750 23008 20391 22235 24366 22464 23572 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30488000 18295 1867 17314 34680 27780 27780 1201 1 9606 Homo sapiens -0.06429361492314456 MDTIDQDDELIR Unmodified 1462.661 0.66097347 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;A0A994J766;Q6P468;Q59EZ5 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 0 1 0 1 53.851 53.851 2 2.3738E-17 15956 20230619_1880_Aki_TMTPro18x_K_F1 223.87 182.45 60172 51492 56036 60940 50796 63336 54269 61195 62806 72189 74572 77519 83797 67501 72577 86049 78564 90651 55624 47215 57219 60805 53350 63806 54834 62946 64024 72506 76375 78124 84667 70965 74408 86386 75195 86008 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40374000 18296 1867 17314 34681 27781 27781 1 9606 Homo sapiens -0.051850576296828876 MDVFLMIR Acetyl (Protein N-term) 1065.5351 0.53510844 1399 A0A8I5KUS5;A0A384MDL3;Q15370;Q15370-2;A0A0B4J296 TCEB2 Transcription elongation factor B polypeptide 2 yes no 1 0 0 7 0 1 68.285 68.305 2 0.0059755 21436 20230619_1887_Aki_TMTPro18x_K_F7 70.912 60.498 2010.4 978.64 1097.4 1473.4 1545.1 1054.1 2051.3 1029.2 2488.1 1598.1 1774.6 1692 857.22 1021.3 1733.8 0 0 1155.6 1847.3 902.16 1199.4 1440.8 1580.6 1098.9 2047.9 1072.4 2477.1 1589.5 1814.9 1686 945.33 1022.2 1642.9 0 0 1081.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 1 752060 18297 1399 17315 34682 27782 27782 1 9606 Homo sapiens 0.004962288418482785 MDVGELLSYQPNR Acetyl (Protein N-term) 1562.7399 0.73989249 814 A0A087WUB9;Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes no 1 0 0 4 0.816 1 1 1 64.908 64.935 2 3.2125E-18 20389 20230619_1883_Aki_TMTPro18x_K_F4 156.83 146.07 5968.9 6341.7 5600.8 5130.8 4165.3 6267.9 5731.8 4438.4 7128.9 5116.2 9208.5 6988.9 7306 7179.6 7268.7 6659.2 5008.6 5846.9 5526.8 5793.2 5697.8 5302.5 4498.4 6212.4 5731.9 4684.7 7247.7 5200 9250.7 7027.7 7515.9 7364.3 7264.8 6659.5 4819.9 5558.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45297000 18298 814 17316 34683;34684;34685 27783;27784 27784 2 9606 Homo sapiens -0.018967856047083842 MDVHDLFR Acetyl (Protein N-term) 1073.4964 0.49641475 4710 Q9Y2R4;A0A087X1P7;A0A087WTD6;A0A087X069 DDX52 Probable ATP-dependent RNA helicase DDX52 yes no 1 0 0 2 0 1 57.756 57.771 2 0.0075467 17713 20230619_1881_Aki_TMTPro18x_K_F2 63.21 53.794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18299 4710 17317 34686 27785 27785 1 9606 Homo sapiens -0.037393604683074955 MDVLVSECSAR Acetyl (Protein N-term);Oxidation (M) 1323.5799 0.57988638 3650 P54136;E5RJM9;E5RH09;E5RI24 RARS Arginine--tRNA ligase, cytoplasmic yes no 1 1 0 1 0 1 46.213 46.213 2 2.7368E-06 12810 20230619_1880_Aki_TMTPro18x_K_F1 119.62 112.71 38124 27531 35948 40063 43132 43536 44053 41845 52697 47560 48014 49606 53547 45964 43963 54743 59028 56869 35210 25317 36828 39458 44240 43720 44620 43026 53011 47838 49728 50147 54041 48000 45762 54958 56317 53999 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27148000 18300 3650 17318 34687 27786 27786 2346 1 9606 Homo sapiens -0.06896036873445155 MDVLVSECSAR Acetyl (Protein N-term) 1307.585 0.58497176 3650 P54136;E5RJM9;E5RH09;E5RI24 RARS Arginine--tRNA ligase, cytoplasmic yes no 1 0 0 1.5 0.5 1 1 58.969 58.976 2 0.0026199 18097 20230619_1880_Aki_TMTPro18x_K_F1 77.049 70.964 62664 49993 57514 84056 81819 97942 72390 63735 131180 225100 411690 688330 285420 345520 417550 357670 458590 683360 57895 46039 59387 82135 83006 97178 75504 72092 141360 232520 405700 664950 302230 367950 424290 377570 439940 644790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128480000 18301 3650 17318 34688;34689 27787 27787 1 9606 Homo sapiens -0.05651733010836324 MDVNIAPLR Acetyl (Protein N-term);Oxidation (M) 1085.5539 0.55392962 225 B4DZZ0;B3KQB4;A0A024R371;O75915;F8WF90;C9JQU6;F8WF33;B4DWQ6 ARL6IP5 PRA1 family protein 3 yes no 1 1 0 2 0 1 50.681 50.732 2 0.00010142 14745 20230619_1881_Aki_TMTPro18x_K_F2 105.39 87.355 50865 38130 43909 47084 49773 48537 52252 56749 60117 52489 58308 55309 60142 51826 56854 64810 65151 60097 46956 34995 45282 46848 51275 49175 52796 57278 60705 53364 59974 55949 61181 54250 58371 64635 62221 57149 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35517000 18302 225 17319 34690 27788;27789 27788 134 2 9606 Homo sapiens 0.0145748173724769 MDVNIAPLR Acetyl (Protein N-term) 1069.559 0.559015 225 B4DZZ0;B3KQB4;A0A024R371;O75915;F8WF90;C9JQU6;F8WF33;B4DWQ6 ARL6IP5 PRA1 family protein 3 yes no 1 0 0 3.5 0.5 1 1 60.56 60.575 2 0.0015408 18656 20230619_1882_Aki_TMTPro18x_K_F3 105.12 87.081 11602 7127.8 10132 10329 9923.3 11506 10409 9182 12688 11218 11559 14911 16669 11475 12069 14354 14880 17328 10700 6559.2 10413 10179 10349 11489 10537 9603.3 12755 11346 12156 14844 16616 12117 12521 14537 14227 16418 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51490000 18303 225 17319 34691;34692 27790 27790 1 9606 Homo sapiens 0.02701785599856521 MDVVGTGQCHNIPCEEGDK Oxidation (M) 2160.8874 0.88743772 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8;H3BR88 IFI16 Gamma-interferon-inducible protein 16 yes no 0 1 0 3 0 1 41.05 41.109 3 0.044887 10092 20230619_1882_Aki_TMTPro18x_K_F3 40.432 36.079 4091 3889.8 5024.9 4475.6 7001.5 11506 8247.2 10035 13685 8210.3 6884.7 10119 14037 10291 7843.8 17176 11495 17063 3793.8 3564.5 5061.1 4564.4 7186.9 11054 8403.9 10289 13354 8468 7711.3 10204 13802 10981 8340.3 17109 11002 16187 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30764000 18304 2829 17320 34693 27791 27791 1687 1 9606 Homo sapiens -0.146570499151494 MDVVGTGQCHNIPCEEGDKLQLFCFR Unmodified 3109.3878 0.38781563 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8;H3BR88 IFI16 Gamma-interferon-inducible protein 16 yes no 0 0 1 7.5 0.5 1 1 59.632 59.673 4 1.4444E-14 17670 20230619_1888_Aki_TMTPro18x_K_F8 144.76 133.76 33902 30520 41804 47983 83964 96534 107520 91908 66983 74522 60960 32701 45156 23576 77769 25229 20628 10464 31428 28069 42547 47620 84377 93758 105670 93683 70345 74923 62047 34807 47959 24795 75061 24686 20219 10132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40691000 18305 2829 17321 34694;34695 27792 27792 1 9606 Homo sapiens -0.08250276099215625 MDYEDDRLR Oxidation (M) 1227.519 0.51900068 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991 MATR3;DKFZp686K23100 Matrin-3 yes no 0 1 1 1.5 0.5 1 1 34.086 34.114 3 0.00038294 7611 20230619_1880_Aki_TMTPro18x_K_F1 123.29 109.93 401000 312710 324320 395900 430500 434350 439090 447250 508910 505280 547260 478290 530690 452590 447980 553920 538730 494760 370100 287030 337840 393420 438920 436690 444340 457480 516060 506740 558380 486270 538270 473000 462580 551430 514270 470710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 834640000 18306 1059 17323 34696;34697 27793 27793 622 1 9606 Homo sapiens -0.08565805861394438 MDYEDDRLR Unmodified 1211.5241 0.52408606 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 1 1.5 0.5 1 1 39.16 39.193 3 1.4075E-06 9425 20230619_1881_Aki_TMTPro18x_K_F2 186.78 170.15 661590 502650 563840 616630 652060 697270 714080 679300 804260 791380 813510 726170 953860 759100 690680 946200 946480 793640 610730 461270 582570 614450 672100 698650 719050 698190 814840 792020 839490 741940 956430 791930 722420 938600 902060 755980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 995110000 18307 1059 17323 34698;34699 27794;27795 27795 2 9606 Homo sapiens -0.0732150199876287 MDYVEINIDHK Unmodified 1375.6442 0.6442012 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;Q6ZS03;Q96CF6;H7C0A4 HDLBP Vigilin yes no 0 0 0 4 0 1 52.818 52.842 3 2.4652E-07 15281 20230619_1883_Aki_TMTPro18x_K_F4 142.91 121.04 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18308 292 17324 34700 27796 27796 1 9606 Homo sapiens -0.028595137250022162 MEAAAEPGNLAGVR Acetyl (Protein N-term);Oxidation (M) 1442.6824 0.68237762 2319 H3BRK5;H3BMW1;H3BNF0;B2RDN3;Q9Y5Y2 NUBP2 Cytosolic Fe-S cluster assembly factor NUBP2 yes no 1 1 0 1 0 1 45.751 45.751 2 8.7074E-05 12649 20230619_1880_Aki_TMTPro18x_K_F1 69.01 58.487 15174 11479 12192 18386 19841 25369 20504 18732 27456 17499 18160 19503 22531 20689 20169 19734 22383 25519 14002 10566 12795 18064 20067 24950 20825 19568 27180 17846 19271 19747 22761 21255 20671 20172 21416 24165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30207000 18309 2319 17325 34701 27797 27797 1426 1 9606 Homo sapiens -0.021256278103464865 MEAAAEPGNLAGVR Acetyl (Protein N-term) 1426.6875 0.68746299 2319 H3BRK5;H3BMW1;H3BNF0;B2RDN3;Q9Y5Y2 NUBP2 Cytosolic Fe-S cluster assembly factor NUBP2 yes no 1 0 0 2 0 1 53.335 53.366 2 0.00092272 15920 20230619_1881_Aki_TMTPro18x_K_F2 64.792 51.284 50039 46733 50227 56390 54784 62603 56056 57914 80736 36730 42882 40995 48462 42060 52455 46490 45034 47662 46312 42847 51114 56232 56639 62718 57185 58932 79195 38486 46023 41509 49489 43582 52827 46736 43178 45247 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33704000 18310 2319 17325 34702 27798 27798 1 9606 Homo sapiens -0.008813239477149182 MEADASVDMFSK Acetyl (Protein N-term);Oxidation (M) 1387.5636 0.56356761 3218 O14530;B8ZZX4;B7Z7A4;O14530-2;F8WBV5;G3XAJ4;F8WCJ3 TXNDC9 Thioredoxin domain-containing protein 9 yes no 1 1 0 1.5 0.5 1 1 59.234 59.241 2 0.0030535 18310 20230619_1881_Aki_TMTPro18x_K_F2 56.404 51.953 72391 60350 82261 94589 75710 93495 75564 80825 62757 87944 73607 95357 84344 67411 80276 89543 88296 116810 67022 55516 82719 92626 79165 94272 75886 83662 65260 88642 75656 95423 85523 71695 82205 91106 84601 110550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11541000 18311 3218 17326 34703;34704 27799 27799 1895 1 9606 Homo sapiens -0.11471162830184767 MEADPELSK Unmodified 1018.4641 0.46411156 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9;O75643-2 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 2.5 0.5 1 1 46.452 46.531 2 0.0056054 12845 20230619_1881_Aki_TMTPro18x_K_F2 93.111 72.209 127130 100210 112020 122640 145290 180010 147160 156820 187430 156290 185950 187510 190320 159390 155970 184030 201390 194980 117410 91943 115660 122740 148580 177070 149500 161720 188480 159010 191000 188030 192500 166650 161860 185070 192200 185100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77631000 18312 3312 17327 34705;34706 27800;27801 27800 2 9606 Homo sapiens -0.044381926619848855 MEAFQELR Acetyl (Protein N-term);Oxidation (M) 1080.491 0.49099502 4372 Q96JM3;A0A2R8Y4S6;S4R3K0;A0A2R8Y735 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes no 1 1 0 1 0 1 51.05 51.05 2 0.0034292 14771 20230619_1880_Aki_TMTPro18x_K_F1 92.187 67.264 12300 17223 12509 13124 14365 18961 15338 15189 21220 10130 11357 10628 11669 9447.3 15703 14252 15271 10945 11426 15716 12726 13684 14834 18653 15580 15640 20853 10550 12134 10745 12095 10034 15863 14065 14585 10446 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17437000 18313 4372 17328 34707 27802 27802 2752 1 9606 Homo sapiens -0.0460308405079104 MEAFQELR Acetyl (Protein N-term) 1064.4961 0.4960804 4372 Q96JM3;A0A2R8Y4S6;S4R3K0;A0A2R8Y735 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes no 1 0 0 1 0 1 61.779 61.779 2 0.083584 19219 20230619_1880_Aki_TMTPro18x_K_F1 50.607 38.56 24290 17067 23140 26956 22239 22971 21780 25040 28076 28349 26732 24950 31202 25407 28528 27847 28468 30051 22431 15712 23605 26345 23161 23573 22200 25524 28211 28370 27674 25501 31566 26338 29049 28072 27249 28514 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18651000 18314 4372 17328 34708 27803 27803 1 9606 Homo sapiens -0.033587801881594714 MEALILEPSLYTVK Acetyl (Protein N-term);Oxidation (M) 1663.8743 0.87426071 650 Q53FU3;A0A024RB72;F8VVA7;P61923;F8VXB1;F8W156;F8VYZ4;P61923-5;F8VUC5;F8W651 COPZ1 Coatomer subunit zeta-1 yes no 1 1 0 5 0.816 1 1 1 65.252 65.279 2 2.0115E-14 20275 20230619_1885_Aki_TMTPro18x_K_F5 119.16 97.109 10822 8807.5 10044 11424 10955 11294 11264 11271 11956 12205 13318 9330.1 14057 10146 13299 13530 12061 11823 10000 8085 10288 11319 11310 11431 11364 11542 12199 12199 13607 9650.2 14272 10627 13470 13446 11550 11248 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44673000 18315 650 17329 34709;34710;34711 27804;27805;27806 27805 390 3 9606 Homo sapiens 0.06887855097284046 MEALILEPSLYTVK Acetyl (Protein N-term) 1647.8793 0.87934609 650 Q53FU3;A0A024RB72;F8VVA7;P61923;F8VXB1;F8W156;F8VYZ4;P61923-5;F8VUC5;F8W651 COPZ1 Coatomer subunit zeta-1 yes no 1 0 0 5.5 1.12 1 1 1 1 67.776 67.807 2 4.6041E-09 21278 20230619_1885_Aki_TMTPro18x_K_F5 105.86 72.743 57483 49350 54732 54878 46736 59948 60160 61971 59622 72165 59035 62297 76304 58784 68200 81113 75458 81960 53143 45224 55721 55059 49541 60243 59881 63423 60842 71953 61346 63575 76911 61898 69894 81153 72173 77800 3 3 4 3 3 3 3 4 3 3 3 4 4 3 3 4 4 3 274090000 18316 650 17329 34712;34713;34714;34715 27807;27808;27809 27807 3 9606 Homo sapiens 0.08132158959892877 MEALIPVINK Acetyl (Protein N-term) 1168.6526 0.65258104 3212;3213 O00429-6;O00429;O00429-3;F8VUJ9;O00429-5;A0A994J696;H0YI79;A0A994J3G1;F8W1W3;B4DDQ3;A0A994J3F1;A0A994J409;B4DPZ9;F8VR28;A0A994J6L3;A0A8V8TQV1;F8VYL3;A0A8V8TRA9;A0A994J691;H0YHY4;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 1 0 0 7 0.816 1 1 1 65.91 65.939 2 0.00013099 20464 20230619_1887_Aki_TMTPro18x_K_F7 100.45 76.116 89301 81815 87761 112260 84404 118530 106490 109480 114200 103220 103730 109820 111210 100030 111340 123850 125630 125340 82624 75117 89419 110880 88723 119080 106330 112320 115460 104870 107320 110890 113340 104740 114070 124130 120060 119040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 503980000 18317 3212;3213 17330 34716;34717;34718 27810;27811;27812 27811 3 9606 Homo sapiens 0.07500084982302724 MEAVVNLYQEVMK Acetyl (Protein N-term) 1594.7735 0.77350081 1534 Q502X7;A0A3G2LMN0;Q9BW60-2;Q9BW60 ELOVL1 Elongation of very long chain fatty acids protein;Elongation of very long chain fatty acids protein 1 yes no 1 0 0 7 0 1 69.058 69.077 2 1.3735E-05 21722 20230619_1887_Aki_TMTPro18x_K_F7 84.17 62.022 5776 5998.8 6222.3 4852.5 3767.9 6059.9 5808.2 7389.3 6433.8 6000.6 5974 4723.5 7775.3 4799.9 7130.9 5811.6 7850.8 6451.5 5353.3 5480.4 6240.9 5022.3 4176.6 6066.3 5764.8 7411.3 6500.1 6098.1 6222.6 4862.1 7836 5013.8 7293.7 5863.6 7495 6126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5705700 18318 1534 17332 34719 27813 27813 1 9606 Homo sapiens -9.500157239017426E-05 MEDEVVR Acetyl (Protein N-term) 918.41168 0.41168206 1319 P23193;A0A384MTX4;A0A1W2PPZ5;B7Z4W0;P23193-2;A0A1W2PRL9;E5RIS7;B7Z4S1;E5RJ93;E5RK46;A0A1W2PS15;E5RFI1 TCEA1 Transcription elongation factor A protein 1 yes no 1 0 0 1 0 1 42.975 42.975 2 0.041965 11420 20230619_1880_Aki_TMTPro18x_K_F1 71.378 67.525 12425 10878 17500 13531 15294 15984 16219 15632 20430 15435 20112 17736 19337 17061 15471 17989 21868 18701 11533 9978.5 17296 13489 16070 15972 16437 15990 20537 15693 20593 17893 19587 17667 16165 18097 20840 17766 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31270000 18319 1319 17333 34720 27814 27814 1 9606 Homo sapiens -0.05078731004925885 MEDLDQSPLVSSSDSPPRPQPAFK Acetyl (Protein N-term);Oxidation (M) 2685.2592 0.25921075 4571 Q9NQC3;Q9NQC3-2;Q9NQC3-5;Q9NQC3-4;Q53R94 RTN4 Reticulon-4 yes no 1 1 1 3.5 0.5 1 1 55.911 55.935 3 8.6115E-09 16757 20230619_1882_Aki_TMTPro18x_K_F3 60.991 58.242 22528 20739 26085 28476 31707 25351 31297 27498 28584 35336 34189 39508 35637 31252 36969 41008 37730 45671 20874 19041 26291 28077 32376 25947 31496 28173 29540 35397 34928 39622 36393 33027 37637 41298 36148 43300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133980000 18320 4571 17334 34721;34722 27815 27815 2816 1 9606 Homo sapiens -0.01600848474618033 MEDLDQSPLVSSSDSPPRPQPAFK Acetyl (Protein N-term) 2669.2643 0.26429613 4571 Q9NQC3;Q9NQC3-2;Q9NQC3-5;Q9NQC3-4;Q53R94 RTN4 Reticulon-4 yes no 1 0 1 4 0 1 61.093 61.096 3 3.5309E-13 18790 20230619_1883_Aki_TMTPro18x_K_F4 76.417 69.141 49419 43012 53482 56480 44299 51552 55948 57201 65657 67023 58575 78563 64629 58609 75690 81412 80314 85015 45746 39479 53876 55872 47070 52624 56052 58322 66092 67536 60870 78495 66338 62300 77060 81625 76832 80693 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 418310000 18321 4571 17334 34723 27816;27817 27817 2 9606 Homo sapiens -0.003565446119864646 MEDLTNPEDIR Unmodified 1331.6027 0.60273031 3897 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 0 0 0 1 0 1 51.369 51.369 2 2.6146E-07 14911 20230619_1880_Aki_TMTPro18x_K_F1 150.1 117.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18322 3897 17335 34724 27818 27818 1 9606 Homo sapiens -0.04980694484311243 MEDMNEYSNIEEFAEGSK Acetyl (Protein N-term);Oxidation (M) 2179.8562 0.8561804 3227 O14979-2;O14979-3;A0A087WU03 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes no 1 1 0 1.5 0.5 1 1 63.23 63.235 3 3.5921E-14 19778 20230619_1880_Aki_TMTPro18x_K_F1 113.69 110.19 76452 60018 66471 92948 80584 86967 93680 84463 81066 104210 106920 93121 112050 98955 95702 127650 100230 117620 70599 55215 68737 90999 82892 88311 93292 87035 84433 103900 108610 95340 113420 103390 98042 127160 95973 111760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 452540000 18323 3227 17336 34725;34726 27819 27819 1897;1898 1 9606 Homo sapiens -0.18655344468288604 MEDMNEYSNIEEFAEGSK Acetyl (Protein N-term) 2163.8613 0.86126578 3227 O14979-2;O14979-3;A0A087WU03 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes no 1 0 0 2 0.816 1 1 1 64.596 64.609 3 2.1535E-13 20343 20230619_1880_Aki_TMTPro18x_K_F1 95.347 90.73 54456 44894 56865 60811 42798 62632 61669 62838 70383 84844 75426 75501 91799 74124 71235 93994 84379 92309 50375 41228 57401 60121 46193 63152 61378 64758 71496 84264 77851 77030 92173 77589 73652 93970 80661 87665 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 217190000 18324 3227 17336 34727;34728;34729 27820;27821 27820 2 9606 Homo sapiens -0.1741104060570251 MEDSASASLSSAAATGTSTSTPAAPTAR Acetyl (Protein N-term);Oxidation (M) 2654.1977 0.19773271 3325 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;J3KPU7;I3L2F2;I3L4T8;I3L1Y4 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 1 1 0 3 0 1 47.718 47.797 3 3.6014E-39 13158 20230619_1882_Aki_TMTPro18x_K_F3 160 159.1 11895 7169.8 11490 10282 9569.5 9996.2 11809 12695 12140 13236 15926 13971 13057 13065 15730 19415 15574 14175 10978 6597.7 11669 10129 10146 10190 11797 12794 12496 13364 16029 14143 13556 13824 15961 19105 14893 13525 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148740000 18325 3325 17337 34730 27822 27822 1952 1 9606 Homo sapiens -0.06319824964521104 MEDSASASLSSAAATGTSTSTPAAPTAR Acetyl (Protein N-term) 2638.2028 0.20281809 3325 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;J3KPU7;I3L2F2;I3L4T8;I3L1Y4 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 1 0 0 4 0 1 52.641 52.664 3 1.4994E-38 15207 20230619_1883_Aki_TMTPro18x_K_F4 131.04 127.4 19727 17953 25580 28308 18356 28156 24718 24132 31610 20839 26643 31018 29198 24163 27099 30145 30079 35287 18298 16511 25416 27715 19865 28356 24773 24865 31565 21568 27711 30799 29620 25470 27776 30473 28786 33442 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150790000 18326 3325 17337 34731 27823 27823 1 9606 Homo sapiens -0.0507552110193501 MEDSMDMDMSPLRPQNYLFGCELK Acetyl (Protein N-term);3 Oxidation (M) 2996.237 0.2370368 1089 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;A0A7I2V4G8;A0A7I2V3G5;A0A7I2V579 NPM1 Nucleophosmin yes no 1 3 1 3 0.816 1 1 1 62.738 62.753 3 1.5177E-09 19507 20230619_1882_Aki_TMTPro18x_K_F3 93.572 90.691 77933 67796 73787 87619 98110 71986 90175 85807 74834 92769 104180 92140 98337 81550 93039 120450 95514 103680 72059 62217 75704 86650 99433 74400 90932 86931 78360 93296 105180 93325 100270 86512 95000 119390 91420 98625 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 465730000 18327 1089 17338 34732;34733;34734 27824;27825;27826 27825 653;654;655;656 3 9606 Homo sapiens -0.18123223592829163 MEDSMDMDMSPLRPQNYLFGCELK Acetyl (Protein N-term);Oxidation (M) 2964.2472 0.24720756 1089 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;A0A7I2V4G8;A0A7I2V3G5;A0A7I2V579 NPM1 Nucleophosmin yes no 1 1 1 5.33 1.97 1 1 1 1 1 1 64.174 64.2 3 5.4188E-09 19981 20230619_1886_Aki_TMTPro18x_K_F6 111.26 108.65 364820 299990 354020 364840 228020 343080 344940 350620 330970 463450 409970 429180 519000 425110 426830 563850 489020 543240 337270 275190 358800 362920 250590 348570 340870 360720 341790 461040 421820 437200 521760 446100 439860 562790 467660 515990 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 2475900000 18328 1089 17338 34735;34736;34737;34738;34739;34740 27827;27828;27829;27830;27831;27832 27831 653;654;655;656 6 9606 Homo sapiens -0.15634615867566026 MEDSMDMDMSPLRPQNYLFGCELK Acetyl (Protein N-term);2 Oxidation (M) 2980.2421 0.24212218 1089 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;A0A7I2V4G8;A0A7I2V3G5;A0A7I2V579 NPM1 Nucleophosmin yes no 1 2 1 4.25 0.829 1 1 2 63.474 63.506 3 3.3581E-08 19810 20230619_1882_Aki_TMTPro18x_K_F3 83.039 80.901 538100 466310 516480 563720 476270 523480 532320 564900 523380 656880 675860 659800 727660 588840 632610 807370 678440 757420 497590 427650 526100 560870 499290 533450 533630 576710 540410 658640 688410 667640 736220 621390 648500 804470 649230 719650 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1977899999.9999998 18329 1089 17338 34741;34742;34743;34744 27833;27834;27835;27836;27837;27838 27833 653;654;655;656 6 9606 Homo sapiens -0.16878919730197595 MEDSMDMDMSPLRPQNYLFGCELK Acetyl (Protein N-term);4 Oxidation (M) 3012.232 0.23195142 1089 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;A0A7I2V4G8;A0A7I2V3G5;A0A7I2V579 NPM1 Nucleophosmin yes no 1 4 1 4.5 1.12 1 1 1 1 62.114 62.148 3 3.2591E-05 19230 20230619_1883_Aki_TMTPro18x_K_F4 76.186 73.746 67679 52006 54539 71222 88625 73900 68356 69942 61932 65798 77424 73888 62651 60978 73574 92460 64004 74254 62457 47778 57072 70342 88634 74487 69915 71631 64109 66941 78068 74291 64965 64914 74212 91333 61402 70682 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 217840000 18330 1089 17338 34745;34746;34747;34748 27839;27840;27841 27839 653;654;655;656 3 9606 Homo sapiens -0.19367527455415257 MEDSMDMDMSPLRPQNYLFGCELK Acetyl (Protein N-term) 2948.2523 0.25229293 1089 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;A0A7I2V4G8;A0A7I2V3G5;A0A7I2V579 NPM1 Nucleophosmin yes no 1 0 1 5.5 0.5 1 1 64.996 65.04 3 2.9670999999999997E-26 20336 20230619_1886_Aki_TMTPro18x_K_F6 116.24 113.48 181240 141530 180510 162050 79583 164970 155710 166190 162470 235490 184240 220410 262200 208980 205290 263010 237780 241370 167540 129780 181890 162110 93289 166470 152980 171500 166410 233680 191650 223910 262340 218860 211860 262060 227220 229470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 674200000 18331 1089 17338 34749;34750 27842;27843 27843 2 9606 Homo sapiens -0.14390312004979933 MEDSQDLNEQSVK Acetyl (Protein N-term);Oxidation (M) 1579.6672 0.66718106 1077 E7ESD5;B4DIV6;A0A0S2Z3Q2;A0A8C8KDW0;E9PLN6;A0A0S2Z3V9;F2Z2Y1;B4DRQ6;O95677-3;O95677-5;O95677-2;O95677-4;O95677 EYA4 Eyes absent homolog;Eyes absent homolog 4 yes no 1 1 0 1 0 1 44.218 44.218 2 0.039774 11982 20230619_1880_Aki_TMTPro18x_K_F1 50.353 42.755 6944.6 4448.2 5504.4 6106.1 5698.3 6720.3 6493.8 7687.6 7719.1 7902.9 10029 9015.9 9938.7 8331.2 8005.2 9313.6 10219 10463 6401.7 4090 5718.5 6038.3 5933.6 6768 6544.2 7788 7883.7 8007.3 10167 9085.9 10054 8670.4 8303.6 9404.1 9758.2 9924.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15916000 18332 1077 17339 34751 27844 27844 643 1 9606 Homo sapiens -0.09946584188833185 MEDSQDLNEQSVK Acetyl (Protein N-term) 1563.6723 0.67226644 1077 E7ESD5;B4DIV6;A0A0S2Z3Q2;A0A8C8KDW0;E9PLN6;A0A0S2Z3V9;F2Z2Y1;B4DRQ6;O95677-3;O95677-5;O95677-2;O95677-4;O95677 EYA4 Eyes absent homolog;Eyes absent homolog 4 yes no 1 0 0 1 0 1 50.147 50.147 2 0.0036534 14409 20230619_1880_Aki_TMTPro18x_K_F1 73.067 73.067 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18333 1077 17339 34752 27845 27845 1 9606 Homo sapiens -0.08702280326224354 MEDTEPFSAELLSAMMR 2 Oxidation (M) 1988.8529 0.8529497 1253 A0A142CHG9;P09471-2;P09471;Q8N6I9;B3KP89;H3BTM2;A0A1W2PP87 GNAO1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 2 0 4 0.816 1 1 1 63.044 63.072 3 0.0080887 19646 20230619_1883_Aki_TMTPro18x_K_F4 61.211 56.663 12782 11780 14545 14909 12930 15175 13137 17618 18902 15602 16584 15985 19081 16488 20632 19498 17753 20756 11842 10806 14605 14807 13577 15377 13428 17762 18830 15893 17235 16241 19468 17153 20788 19619 17035 19690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40958000 18334 1253 17340 34753;34754;34755 27846 27846 795;796;797 1 9606 Homo sapiens -0.10192266056037624 MEDTEPFSAELLSAMMR Oxidation (M) 1972.858 0.85803507 1253 A0A142CHG9;P09471-2;P09471;Q8N6I9;B3KP89;H3BTM2;A0A1W2PP87 GNAO1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 1 0 4.5 0.5 1 1 63.938 63.965 3 0.00027239 20008 20230619_1883_Aki_TMTPro18x_K_F4 75.143 69.329 19688 16116 19368 21021 20120 24762 20393 17466 24326 25531 27265 24653 24632 26270 25989 28851 25450 28985 18202 14795 19724 20864 20873 24583 20668 18575 24682 25359 27707 25133 25321 27159 26392 28953 24380 27516 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52919000 18335 1253 17340 34756;34757 27847;27848 27847 795;796;797 2 9606 Homo sapiens -0.08947962193428793 MEDTEPFSAELLSAMMR Unmodified 1956.8631 0.86312045 1253 A0A142CHG9;P09471-2;P09471;Q8N6I9;B3KP89;H3BTM2;A0A1W2PP87 GNAO1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 4.5 0.5 1 1 65.356 65.383 3 2.3895E-48 20310 20230619_1885_Aki_TMTPro18x_K_F5 226.24 215.39 27487 25778 31156 28930 22369 27337 27034 25401 31420 36502 36399 39596 39624 38774 40781 40927 40924 50888 25468 23618 31198 28952 24071 27727 27144 26394 31985 36390 37284 40014 40425 40132 41461 41650 39224 48191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192490000 18336 1253 17340 34758;34759 27849 27849 1 9606 Homo sapiens -0.07703658330819962 MEDTPLVISK Acetyl (Protein N-term);Oxidation (M) 1189.59 0.59004036 483 A0A024R806;Q9BT73 MGC10911;PSMG3 Proteasome assembly chaperone 3 yes no 1 1 0 2 0 1 56.541 56.56 2 8.8943E-05 17215 20230619_1881_Aki_TMTPro18x_K_F2 89.543 69.379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18337 483 17341 34760 27850 27850 297 1 9606 Homo sapiens 0.002828941234611193 MEDTSFPSGGNAIGVNSASSK Oxidation (M) 2070.9164 0.91641289 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A8Q3WLE0;Q6ZSB8;Q6ZT55 ENAH Protein enabled homolog yes no 0 1 0 4.5 0.5 1 1 48.846 48.903 3 1.3902E-11 13220 20230619_1885_Aki_TMTPro18x_K_F5 125.59 124.47 39398 36850 38478 43986 40148 47939 47600 41626 51216 51694 53219 50068 54237 42769 52205 55362 54222 53164 36456 33782 39232 43880 41796 48030 47661 43252 52058 51661 54538 50668 55201 45040 53250 55301 51852 50523 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 193070000 18338 918 17342 34761;34762 27851;27852 27851 527 2 9606 Homo sapiens -0.07620866022898554 MEEADALIESLCR Unmodified 1535.696 0.69597877 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 3.5 0.5 1 1 63.469 63.488 3 7.0538E-05 19905 20230619_1882_Aki_TMTPro18x_K_F3 107.65 87.539 22979 23436 20462 21899 16577 23435 23728 23786 23896 24301 28869 26942 30777 26885 31612 34147 30570 34457 21261 21434 20954 22281 17760 23592 23523 24291 24525 24612 29466 27261 31391 28115 32089 34207 29286 32710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78214000 18339 832 17343 34763;34764 27853 27853 1 9606 Homo sapiens -0.05044138093398942 MEEADALIESLCR Oxidation (M) 1551.6909 0.69089339 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 1 0 3 0 1 61.476 61.505 3 0.0058868 19018 20230619_1882_Aki_TMTPro18x_K_F3 63.727 51.808 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18340 832 17343 34765 27854 27854 494 1 9606 Homo sapiens -0.06288441956007773 MEEANIQPNR Oxidation (M) 1216.5506 0.55063516 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 1 0 1.5 0.5 1 1 32.86 32.89 2 0.00039307 6816 20230619_1881_Aki_TMTPro18x_K_F2 121.64 112.78 87440 62532 73118 83223 104540 101910 90296 105440 126160 99750 125060 131240 114690 108580 116460 107800 130940 126400 80680 57448 75980 82578 105720 101730 92996 107270 126340 102110 127950 131010 117550 112660 119140 109430 125110 119870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 416760000 18341 1723 17344 34766;34767 27855;27856 27856 1131 2 9606 Homo sapiens -0.0489781310741364 MEEANIQPNR Unmodified 1200.5557 0.55572054 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 2.5 0.5 1 1 38.516 38.574 2 1.5927E-05 9140 20230619_1881_Aki_TMTPro18x_K_F2 162.59 139.85 279630 205740 253410 250050 277700 312820 268940 272690 369790 343470 357840 384110 384290 331620 343200 357660 431540 394720 258200 188820 259930 249730 286590 310650 274830 283200 370560 344690 368990 386140 389550 345200 354630 361070 411790 374650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 269840000 18342 1723 17344 34768;34769 27857;27858 27857 2 9606 Homo sapiens -0.036535092447820716 MEEDQELERK Acetyl (Protein N-term);Oxidation (M) 1363.5926 0.59255956 3426 P0DPB6;Q7Z776;A0A8I5KX40;A0A087X0U2;A0A1B0GUZ5;P0DPB5 POLR1D yes no 1 1 1 1 0 1 38.455 38.455 2 0.0027631 9353 20230619_1880_Aki_TMTPro18x_K_F1 54.722 47.516 22935 20485 19901 22739 28259 26745 29034 23879 31014 25344 26297 22067 28388 22522 23870 29471 31037 28741 21197 18770 20610 22833 28681 26694 29266 24644 31286 25456 27264 22594 28692 23596 24777 29444 29611 27315 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26087000 18343 3426 17345 34770 27859 27859 2046 1 9606 Homo sapiens -0.07469302209551643 MEEESGAPGVPSGNGAPGPK Unmodified 1866.8418 0.84179138 3631 P52272-2;P52272;A0A087X0X3;M0R019;M0R2T0;B4DEG4;M0R0N3;M0QYQ7;M0R0Y6 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 3 0 1 45.718 45.794 3 0.068687 12200 20230619_1882_Aki_TMTPro18x_K_F3 46.663 36.382 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18344 3631 17346 34771 27860 27860 1 9606 Homo sapiens -0.05695584043655799 MEEETEVR Oxidation (M) 1037.4335 0.43353972 4506 Q9H307;A8K964;B4DTD4;B4E392 PNN Pinin yes no 0 1 0 1 0 1 30.148 30.148 2 0.0071915 6039 20230619_1880_Aki_TMTPro18x_K_F1 101.72 79.574 16623 8727.4 20312 19010 24585 31540 22004 25184 27177 16575 26643 30604 25677 23820 24083 12347 29606 30238 15365 8085.6 20388 18496 25162 30758 22507 25925 27324 17659 27345 30172 26177 24197 24754 13635 28278 28528 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34257000 18345 4506 17347 34772 27861 27861 2801 1 9606 Homo sapiens -0.08367971047005085 MEEETEVRESEK Unmodified 1494.6508 0.65080272 4506 Q9H307;A8K964;B4DTD4;B4E392 PNN Pinin yes no 0 0 1 1 0 1 38.548 38.548 3 6.5665E-05 9473 20230619_1880_Aki_TMTPro18x_K_F1 117.93 94.221 32951 33447 38216 33408 38027 39973 40137 43253 46337 42089 49045 43583 46921 36831 41163 51169 55777 44186 30555 30606 38350 33868 39544 40020 40560 43908 46942 42642 50055 43995 47676 38974 42816 50770 53146 42085 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89930000 18346 4506 17348 34773 27862 27862 1 9606 Homo sapiens -0.07673665354923287 MEEFKDQLPADECNK Unmodified 1852.7971 0.79714938 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 1 5 0.707 1 2 1 51.668 51.731 3;4 3.8489E-10 14662 20230619_1886_Aki_TMTPro18x_K_F6 150.34 137.02 422170 384680 474090 427060 421000 478150 559520 467560 392350 552130 540340 352830 394370 258480 609550 266630 287630 189100 391040 352440 476300 428760 444610 479500 551020 480750 415540 546930 540300 364060 416280 270600 596360 264700 277630 180790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 769460000 18347 1488 17349 34774;34775;34776;34777 27863;27864 27864 2 9606 Homo sapiens -0.095137311813005 MEEGEVYAIETFGSTGK Oxidation (M) 1862.8244 0.82440998 1169 F8VQZ7;A0A140VJE3;P50579-2;P50579;F8VRR3;P50579-3;Q96B43 METAP2 Methionine aminopeptidase 2;Methionine aminopeptidase yes no 0 1 0 3 0.816 1 1 1 59.83 59.845 3 2.8389E-06 18553 20230619_1881_Aki_TMTPro18x_K_F2 100.41 100.33 30438 25152 29444 32528 31424 34804 37320 28642 36666 34574 31979 34375 36738 30295 38507 41387 35372 38474 28139 23087 30046 32264 32633 34881 37243 29878 37214 34631 33273 34770 37421 31972 38970 41240 33895 36562 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56726000 18348 1169 17350 34778;34779;34780 27865;27866 27865 716 2 9606 Homo sapiens -0.07248924369355336 MEEIGILVEK Acetyl (Protein N-term) 1201.6264 0.62642587 2016 A8K2M0;P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 1 0 0 2.5 0.5 1 1 65.75 65.771 2 0.00017108 20849 20230619_1882_Aki_TMTPro18x_K_F3 66.692 33.176 29841 25030 30350 28555 22801 30172 33424 32875 36497 34303 33593 35307 36005 31591 31188 37279 36228 35866 27602 22945 30674 28588 24602 30441 33185 33436 36885 34621 34719 35669 36453 33004 32110 37276 34611 34082 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55080000 18349 2016 17351 34781;34782 27867;27868 27868 2 9606 Homo sapiens 0.03367771020180044 MEELHNQEMQK 2 Oxidation (M) 1447.6072 0.60716376 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 2 0 1.5 0.5 1 1 32.448 32.478 3 0.00024515 6674 20230619_1881_Aki_TMTPro18x_K_F2 99.589 83.833 26115 17205 21787 26620 33192 33104 31468 30761 36758 28339 36176 31707 31388 26727 31575 29086 37364 34246 24085 15840 22692 26174 33515 32923 31978 31521 37086 28889 36905 31887 32201 27865 32408 29489 35672 32484 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32784000 18350 1450 17352 34783;34784 27869 27869 948;949 1 9606 Homo sapiens -0.09873553333045493 MEELHNQEMQK Oxidation (M) 1431.6122 0.61224914 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 1 0 2.5 0.5 2 2 36.973 37.03 3 4.13E-05 8251 20230619_1881_Aki_TMTPro18x_K_F2 130.1 114.9 170580 127570 155220 164760 195540 229090 220150 207860 258250 223080 236910 237550 257870 203700 202370 252640 273760 249920 157530 117140 159680 164150 200750 226210 221610 214180 260000 225170 244930 239400 259850 213890 210960 252800 261080 237490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 185280000 18351 1450 17352 34785;34786;34787;34788 27870;27871;27872 27870 948;949 3 9606 Homo sapiens -0.08629249470459399 MEELHNQEMQK Unmodified 1415.6173 0.61733452 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 3.5 0.5 1 1 41.336 41.387 3 2.6827E-09 10211 20230619_1882_Aki_TMTPro18x_K_F3 184.03 160.28 176280 132560 168980 167920 177350 228350 195440 180320 247880 211970 240140 227240 258070 211010 194740 248930 280680 251020 162870 121690 172440 167440 184390 225120 197590 188390 249120 213150 247360 229550 259840 220240 204160 249500 267510 238500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142480000 18352 1450 17352 34789;34790 27873;27874 27874 2 9606 Homo sapiens -0.07384945607827831 MEELHNQEVQK Oxidation (M) 1399.6402 0.64017845 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;H7C367;C9JYS8 NONO Non-POU domain-containing octamer-binding protein yes no 0 1 0 2.5 0.5 1 1 35.511 35.568 3 5.3161E-05 7889 20230619_1881_Aki_TMTPro18x_K_F2 125.36 109.42 87866 60715 76774 85048 108110 99611 102670 95982 122890 96015 121180 110060 107580 104430 105010 105120 124250 108010 81083 55818 79416 84054 109560 99568 104420 98325 123860 97533 123740 110960 110210 107880 107880 105810 118580 102620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154540000 18353 1112 17353 34791;34792 27875;27876 27875 696 2 9606 Homo sapiens -0.043656032187072924 MEESFSSK Oxidation (M) 959.39061 0.39061227 668;675;4643 A0A024RBE7;P42167;G5E972;H0YJH7;A0A024RBH7;P42167-2;Q59G12;Q9P1N8 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 1 0 3 0 1 39.34 39.394 2 0.0245 9321 20230619_1882_Aki_TMTPro18x_K_F3 78.149 52.412 104730 65025 91322 102020 121600 122220 122340 126750 133890 110450 143410 146720 131270 121240 132610 97044 160670 149720 96593 59893 94400 100200 123860 122120 123660 128720 136010 113620 146200 146380 134500 124640 136160 100990 153380 141690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84920000 18354 668;675;4643 17355 34793 27877 27877 412 1 9606 Homo sapiens -0.09070741104426361 MEESFSSK Unmodified 943.3957 0.39569765 668;675;4643 A0A024RBE7;P42167;G5E972;H0YJH7;A0A024RBH7;P42167-2;Q59G12;Q9P1N8 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 0 0 3.33 0.471 2 1 45.119 45.184 2;3 0.00056982 11942 20230619_1882_Aki_TMTPro18x_K_F3 161.02 109.17 245620 175850 227680 239980 251370 296230 268480 291350 356890 260360 310240 336280 333030 282830 269770 268790 358980 332770 226810 161600 233240 237790 260020 295040 272450 297070 356360 267270 321580 336020 336250 292820 280320 273970 342430 315490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 186320000 18355 668;675;4643 17355 34794;34795;34796 27878;27879;27880 27879 3 9606 Homo sapiens -0.0782643724181753 MEESGYESVLCVKPDVHVYR Acetyl (Protein N-term) 2438.1246 0.12463153 2594 B4DUR7;F6SKB8;Q53FE5;Q9NVZ3-3;Q9NVZ3;Q9NVZ3-2;D6RAN6;D6RB24 NECAP2 Adaptin ear-binding coat-associated protein 2 yes no 1 0 1 5 0 1 57.776 57.835 3 6.4567E-16 17037 20230619_1885_Aki_TMTPro18x_K_F5 104.03 101.19 15590 13389 13541 16014 13510 17079 17840 18231 16248 17903 21352 20589 22121 22660 21733 25049 23802 26571 14405 12278 13946 15972 14166 17210 17692 18536 16846 18191 21701 20869 22560 23416 22240 25210 22773 25211 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12058000 18356 2594 17356 34797 27881 27881 1 9606 Homo sapiens -0.03690580430247792 MEETPTEYLQR Oxidation (M) 1411.6289 0.62894506 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 1 0 2 0 1 44.095 44.177 2 4.0304E-06 11783 20230619_1881_Aki_TMTPro18x_K_F2 158.08 115.21 55426 45723 56701 58072 48722 51647 52936 52032 55706 74010 75980 64107 77780 64249 66829 89986 75161 72852 51264 41960 57370 57555 51327 52738 53263 53729 57480 73291 76991 65609 78787 67624 68740 88986 71817 69385 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56724000 18357 1296 17357 34798 27882 27882 822 1 9606 Homo sapiens -0.06040425312858133 MEETPTEYLQR Unmodified 1395.634 0.63403044 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 2.5 0.5 1 1 48.676 48.748 2 5.3274E-06 13894 20230619_1881_Aki_TMTPro18x_K_F2 157.99 141.86 34180 25718 26791 37375 29266 35739 35565 33526 40795 44718 44715 41173 45120 41036 37382 48749 45676 48500 31533 23646 27938 36735 30422 36196 35648 34716 41439 44490 45678 41969 45692 42736 38671 48817 43642 46058 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219670000 18358 1296 17357 34799;34800 27883 27883 1 9606 Homo sapiens -0.04796121450226565 MEEVVIAGMSGK Acetyl (Protein N-term);2 Oxidation (M) 1323.605 0.6050385 3606 P49327;A0A0U1RQF0;A0A0U1RRG3;A0A1B0GTR5;Q13587 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 1 2 0 2 0 1 50.573 50.625 2 0.00010871 14757 20230619_1881_Aki_TMTPro18x_K_F2 50.292 41.52 22687 18279 19178 21763 20009 18965 23823 26983 23757 21383 24530 23474 21910 20161 23872 23403 24070 25629 20949 16766 19799 21667 20798 19582 23807 26855 24223 21962 25018 23636 22547 21073 24250 23593 23039 24313 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28356000 18359 3606 17358 34801 27884 27884 2280;2281 1 9606 Homo sapiens -0.04381982070867707 MEEVVIAGMSGK Acetyl (Protein N-term);Oxidation (M) 1307.6101 0.61012387 3606 P49327;A0A0U1RQF0;A0A0U1RRG3;A0A1B0GTR5;Q13587 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 1 1 0 3 0.816 1 1 1 59.649 59.664 2 1.8932E-05 18254 20230619_1882_Aki_TMTPro18x_K_F3 68.893 59.679 136620 109750 119410 129490 108190 131500 124560 119600 129020 161590 162720 155450 181140 144080 158020 185740 151890 181130 126190 100660 122630 129190 113840 132550 124840 124160 132690 160830 166120 157760 183080 151250 160920 185630 145590 171980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 141070000 18360 3606 17358 34802;34803;34804 27885;27886 27886 2280;2281 2 9606 Homo sapiens -0.03137678208258876 MEEVVIAGMSGK Acetyl (Protein N-term) 1291.6152 0.61520925 3606 P49327;A0A0U1RQF0;A0A0U1RRG3;A0A1B0GTR5;Q13587 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 1 0 0 3 0.816 1 1 1 64.912 64.929 2 7.1496E-15 20503 20230619_1882_Aki_TMTPro18x_K_F3 98.044 87.334 409110 351350 395660 326290 203170 298690 309020 306660 318070 504970 457710 455140 490190 407220 435500 553430 491840 489720 378310 321490 399750 331720 229710 304470 306190 318050 329870 497830 464440 462650 496580 429380 447580 549880 470030 465820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 888280000 18361 3606 17358 34805;34806;34807 27887;27888 27887 2 9606 Homo sapiens -0.018933743456273078 MEEVYLPDNINEGQVQVR Unmodified 2132.0208 0.020818382 4240 V9HW32;Q8N8N7;G3V3Y1;Q8N8N7-2 HEL-S-298;PTGR2 Prostaglandin reductase 2 yes no 0 0 0 3 0 1 58.54 58.57 3 0.0001674 17871 20230619_1882_Aki_TMTPro18x_K_F3 82.007 66.064 12411 9473.1 11498 11261 10205 13604 12213 12770 16726 13683 12062 13038 15396 11909 15890 12755 14619 15445 11464 8690.5 11738 11259 10785 13554 12337 13124 16596 13768 12753 13219 15623 12379 16062 12965 14005 14638 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6167800 18362 4240 17359 34808 27889 27889 1 9606 Homo sapiens 8.880524455889827E-05 MEFAELIK Acetyl (Protein N-term) 1021.5154 0.51541885 2642 B4E0V7;Q53EW4;Q96QG7;E9PR67 MTMR9 Myotubularin-related protein 9 yes no 1 0 0 3.5 0.5 1 1 66.274 66.286 2 0.0038678 20925 20230619_1883_Aki_TMTPro18x_K_F4 66.682 66.682 13381 9766.8 12280 11358 8457.4 10544 11907 12631 14243 11981 14145 16300 16658 13074 14723 14396 16187 18601 12357 8959.7 12504 11338 9195 10770 11885 12744 14363 12274 14642 16237 16822 13671 15084 14681 15490 17613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10597000 18363 2642 17360 34809;34810 27890;27891 27891 2 9606 Homo sapiens 0.0055217610274667095 MEFQAVVMAVGGGSR Acetyl (Protein N-term);Oxidation (M) 1595.7436 0.74359766 4583 Q9NR50;Q9NR50-3;Q9NR50-2;A0A0D9SEN0 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes no 1 1 0 6 0 1 64.634 64.678 2 4.0852E-05 20201 20230619_1886_Aki_TMTPro18x_K_F6 77.593 65.017 27852 23312 25429 23410 23037 26591 29630 25695 27859 29960 27868 35770 31399 28231 32030 32477 29790 39687 25739 21346 25989 23697 24298 26638 29435 26439 28501 30218 28814 35760 31971 29595 32441 32970 28593 37582 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16341000 18364 4583 17361 34811 27892 27892 2818 1 9606 Homo sapiens -0.030444391025412187 MEFQAVVMAVGGGSR Acetyl (Protein N-term) 1579.7487 0.74868304 4583 Q9NR50;Q9NR50-3;Q9NR50-2;A0A0D9SEN0 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes no 1 0 0 7.5 0.5 1 1 66.574 66.595 2 3.6666E-05 20574 20230619_1888_Aki_TMTPro18x_K_F8 77.593 67.606 6401.1 8775.4 9867.7 9804.7 8224.5 7717.7 10917 10047 11218 10026 9122.8 7879.3 8875.8 10087 10974 14203 11982 11968 5970.5 8031.4 9710.7 9797 8721.5 8023.4 10860 10107 11326 10072 9446.3 8188.3 9188.1 10537 11196 14071 11455 11391 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26426000 18365 4583 17361 34812;34813 27893;27894 27893 2 9606 Homo sapiens -0.018001352399323878 MEFSGGGLLL Unmodified 1022.5107 0.51066783 586 H0YK61;A0A024R9N3;Q5J8M3 EMC4;TMEM85 ER membrane protein complex subunit 4 yes no 0 0 0 6 0.816 1 1 1 65.636 65.673 2 0.00010745 20609 20230619_1886_Aki_TMTPro18x_K_F6 142.64 129.58 40364 27705 38741 42026 42494 44094 47317 46037 46809 42708 55785 50360 52774 53564 55842 59632 49751 46776 37274 25496 39566 41278 43939 44465 47421 46819 48038 43586 56662 50950 54148 55397 56416 59112 47640 44575 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65890000 18366 586 17362 34814;34815;34816 27895 27895 1 9606 Homo sapiens 0.0003129195999918011 MEGGFGSDFGGSGSGK Acetyl (Protein N-term);Oxidation (M) 1533.6042 0.60418687 3153 K7EIT2;Q9Y5L4 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes no 1 1 0 2 0 1 53.056 53.089 2 9.1127E-26 15772 20230619_1881_Aki_TMTPro18x_K_F2 190.15 190.15 47397 41872 50068 54728 66444 58577 55015 54001 54725 62836 64404 56605 62493 51098 60983 76259 59670 62890 43869 38429 50890 54252 67278 58876 56143 55724 56218 62826 65496 57624 63747 54216 62056 75433 57127 59863 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91483000 18367 3153 17363 34817 27896 27896 1837 1 9606 Homo sapiens -0.141271051862077 MEGGFGSDFGGSGSGK Acetyl (Protein N-term) 1517.6093 0.60927225 3153 K7EIT2;Q9Y5L4 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes no 1 0 0 2.5 0.5 1 1 59.707 59.728 2 1.1751E-10 18288 20230619_1882_Aki_TMTPro18x_K_F3 132.32 125.43 49799 43263 42446 43044 42462 56649 42722 41756 50146 56949 51515 52100 61355 45172 50887 63502 54665 61470 46009 39607 43739 43682 44221 55912 43306 44087 50784 56597 53218 52879 61761 47831 52210 63363 52313 58381 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142080000 18368 3153 17363 34818;34819 27897 27897 1 9606 Homo sapiens -0.1288280132359887 MEGGTENDLR Oxidation (M) 1136.4768 0.47680152 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5 SRRT Serrate RNA effector molecule homolog yes no 0 1 0 1 0 1 31.284 31.284 2 0.00013014 6516 20230619_1880_Aki_TMTPro18x_K_F1 139.38 86.662 50929 30282 50179 55480 64052 63899 55751 61471 77252 54535 72631 70404 62237 59864 59938 45685 81385 71710 47006 27958 51264 54023 65198 63893 57370 62773 77200 56013 74255 70374 63809 61350 62085 47649 77594 67870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87887000 18369 4464 17364 34820 27898 27898 2779 1 9606 Homo sapiens -0.08597781269759253 MEGHDPKEPEQLR Acetyl (Protein N-term);Oxidation (M) 1622.7359 0.73586975 2450 P51991-2;B4DDB6;B4E3E6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 1 1 1 1.5 0.5 1 1 34.269 34.325 3 0.00024724 7385 20230619_1881_Aki_TMTPro18x_K_F2 67.964 53.934 26835 21126 24794 31204 34236 38702 34560 30224 34916 33111 41404 37897 34340 32565 38328 28097 33350 31817 24792 19424 25543 30753 34827 38358 34825 31556 35790 33465 41853 38068 35469 33518 38572 28558 31947 30186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33662000 18370 2450 17366 34821;34822 27899;27900 27900 1511 2 9606 Homo sapiens -0.05058875098438875 MEGHDPKEPEQLR Acetyl (Protein N-term) 1606.741 0.74095513 2450 P51991-2;B4DDB6;B4E3E6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 1 0 1 2 0 1 38.431 38.494 3 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 115320000 18371 2450 17366 34823 0 9606 Homo sapiens -0.03814571235807307 MEGHDPKEPEQLRK Acetyl (Protein N-term);Oxidation (M) 1750.8308 0.83083277 2450 P51991-2;B4DDB6;B4E3E6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 1 1 2 2.5 0.5 1 1 35.779 35.836 4 0.00063004 7989 20230619_1881_Aki_TMTPro18x_K_F2 58.32 44.237 247710 226930 230120 276070 344200 300760 328940 291360 264850 262700 314610 235670 245250 183270 337950 202560 204340 160890 229080 208090 237170 275050 347260 302270 330470 297650 275400 266120 317120 238900 256510 191870 333880 201420 196500 153420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 399930000 18372 2450 17367 34824;34825 27901;27902 27901 1511 2 9606 Homo sapiens -0.014549416272529925 MEGHDPKEPEQLRK Acetyl (Protein N-term) 1734.8359 0.83591814 2450 P51991-2;B4DDB6;B4E3E6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 1 0 2 3.67 1.25 1 1 1 38.926 38.993 4 1.2619E-05 9136 20230619_1883_Aki_TMTPro18x_K_F4 61.167 55.045 136190 104000 120770 124370 142890 165980 146660 158730 135510 142830 140500 140280 139250 105200 153900 105770 105730 94108 125760 95416 124340 124490 146820 164480 147360 162140 138970 145050 143930 141240 142680 109740 153310 105820 101540 89551 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 256120000 18373 2450 17367 34826;34827;34828 27903 27903 1 9606 Homo sapiens -0.002106377646441615 MEGHYVHAGNIIATQR Oxidation (M) 1811.8737 0.87370063 4641 Q9P0M9;D6RAN8;H7C5U8;D6RE11;B3KN43 MRPL27 39S ribosomal protein L27, mitochondrial yes no 0 1 0 7 0 1 35.035 35.111 4 8.3027E-06 7329 20230619_1887_Aki_TMTPro18x_K_F7 113.11 94.031 13090 7492.9 12990 13587 14425 16871 13205 17999 14111 14175 14317 16659 18402 14129 17211 13841 17857 15383 12080 6918 13229 13256 14845 16821 13430 18190 14344 14598 14879 16704 18584 14651 17537 14014 17062 14604 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18903000 18374 4641 17368 34829 27904 27904 2841 1 9606 Homo sapiens 0.00023873220834502717 MEGIGLK Unmodified 746.39966 0.39966081 225 B4DZZ0;B3KQB4;A0A024R371;O75915 ARL6IP5 PRA1 family protein 3 yes no 0 0 0 7.5 0.5 1 1 50.529 50.607 2 0.047651 13863 20230619_1887_Aki_TMTPro18x_K_F7 87.284 37.694 489860 417150 463480 549200 560300 673180 674150 647480 781770 620920 789840 889910 809520 748870 708400 762630 966570 990920 452870 382920 475210 545220 577920 670440 676170 662670 789820 637430 811470 886250 821460 777740 736640 778780 922480 938670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 503970000 18375 225 17369 34830;34831 27905 27905 1 9606 Homo sapiens 0.016316970425464206 MEGISNFK Acetyl (Protein N-term) 966.44807 0.44806757 4376 V9HWH0;Q96KB5;Q96KB5-2;E5RIE1 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase yes no 1 0 0 4.5 0.5 1 1 60.013 60.04 2 0.00099015 17893 20230619_1885_Aki_TMTPro18x_K_F5 102.72 84.684 156730 134190 150470 166080 125440 176620 154700 150270 166780 178020 167920 153120 190510 157050 156490 198940 165740 181700 144920 123100 153130 165210 133370 177100 154710 156110 169370 177700 173100 156800 192060 164110 160480 198160 158600 172700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 110520000 18376 4376 17370 34832;34833 27906;27907 27907 2 9606 Homo sapiens -0.03649854108209638 MEGLDDGPDFLSEEDR Acetyl (Protein N-term) 1865.7625 0.76253801 2117 A8K885;Q9UNH7;G3V5X9;H0YJF8;G3V4Z5;G3V2U1 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 1 0 0 1 0 1 64.298 64.298 2 0.00034471 20250 20230619_1880_Aki_TMTPro18x_K_F1 73.466 66.613 3491.9 2623 3802.6 3959.3 2889.4 3553 4264.8 3191.5 4759.3 4974.2 3676.9 5040.2 5847.1 4392.4 5587.8 6939.7 4976 6575.5 3229.6 2412.7 3825.2 3881.7 3112.2 3613.7 4233.1 3337.8 4783 4934.5 3929.9 5089.6 5882.6 4689.3 5660.9 6907.4 4778 6243.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12069000 18377 2117 17371 34834 27908 27908 1 9606 Homo sapiens -0.135712757884221 MEGLTLSDAEQK Acetyl (Protein N-term);Oxidation (M) 1378.6286 0.62861071 2937 F2Z3L2;E9PMG1;Q96D71-2;Q96D71-4;Q96D71-3;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 yes no 1 1 0 1 0 1 53.13 53.13 2 6.3974E-05 15663 20230619_1880_Aki_TMTPro18x_K_F1 68.657 60.116 15431 14256 15526 19676 16346 18580 16331 16577 21886 18557 18182 23196 22714 20885 19305 20234 25620 23817 14281 13090 15801 19398 16927 18822 16640 17137 21835 18801 19060 23238 22896 21580 20041 20545 24439 22590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11704000 18378 2937 17372 34835 27909 27909 1747 1 9606 Homo sapiens -0.045558450326780076 MEGNAEESTLFCFAVR Unmodified 1859.8182 0.81821917 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 4 0 1 62.213 62.218 3 0.024714 19295 20230619_1883_Aki_TMTPro18x_K_F4 49.463 40.531 17412 17687 22363 22126 20696 22601 22609 21378 19984 25537 23320 22546 26778 22531 23503 27071 25567 24028 16162 16218 22279 21989 21653 22793 22616 22040 20675 25486 23919 23028 27061 23482 24089 26953 24432 22860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29177000 18379 826 17373 34836 27910 27910 1 9606 Homo sapiens -0.0772972108184149 MEGPLSVFGDR Acetyl (Protein N-term);Oxidation (M) 1264.5758 0.57578728 3470 P17987;E7ERF2;F5GZI8;F5GZ03;F5GYL4 TCP1 T-complex protein 1 subunit alpha yes no 1 1 0 2 0.816 1 1 1 62.681 62.694 2 5.0437E-05 19365 20230619_1880_Aki_TMTPro18x_K_F1 95.523 89.159 41100 33242 41400 44344 41969 51260 43485 41139 54962 48958 48123 51442 50290 42465 54361 48313 48519 53609 38004 30525 42061 43944 43646 51060 44111 42949 55068 49158 49829 51780 51444 44420 54852 48775 46515 50844 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132080000 18380 3470 17374 34837;34838;34839 27911;27912 27911 2113 2 9606 Homo sapiens -0.04591758304832183 MEGPLSVFGDR Acetyl (Protein N-term) 1248.5809 0.58087266 3470 P17987;E7ERF2;F5GZI8;F5GZ03;F5GYL4 TCP1 T-complex protein 1 subunit alpha yes no 1 0 0 2.5 1.12 1 1 1 1 64.994 65.007 2 1.0916E-12 20499 20230619_1882_Aki_TMTPro18x_K_F3 166.09 146.3 25414 21809 25552 26661 23506 26017 27082 26241 31393 31040 29701 39520 35130 32660 28882 37703 36258 40606 23508 20004 25921 26522 24677 26367 27236 26933 31683 31369 30854 39469 35412 34167 29936 37945 34650 38521 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 635430000 18381 3470 17374 34840;34841;34842;34843 27913;27914;27915 27914 3 9606 Homo sapiens -0.03347454442200615 MEGQSVEELLAK Acetyl (Protein N-term) 1374.6701 0.67008159 3912 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog yes yes 1 0 0 2 0.816 1 1 1 64.074 64.087 2 6.4519E-13 20426 20230619_1881_Aki_TMTPro18x_K_F2 94.692 76.077 59662 51234 54315 56455 39162 68452 55589 62252 64291 69796 58531 61071 84231 61191 58916 77374 65026 76578 55144 46947 55436 56758 42541 68112 55400 64192 64842 69868 61446 62403 83877 64035 60797 77391 62238 72700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168940000 18382 3912 17375 34844;34845;34846 27916 27916 1 9606 Homo sapiens -0.002266642733502522 MEGSGEQPGPQPQHPGDHR Acetyl (Protein N-term);Oxidation (M) 2097.8923 0.89226382 4668 Q9UJA5;Q9UJA5-2;Q9UJA5-3 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes no 1 1 0 1 0 2 26.567 26.567 3 0.0016978 3848 20230619_1880_Aki_TMTPro18x_K_F1 53.278 50.381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6539000 18383 4668 17376 34847;34848 27917;27918 27918 2849 2 9606 Homo sapiens -0.11276661665988286 MEGSGEQPGPQPQHPGDHR Acetyl (Protein N-term) 2081.8973 0.8973492 4668 Q9UJA5;Q9UJA5-2;Q9UJA5-3 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes no 1 0 0 1 0 1 30.201 30.201 3 5.5466E-15 6070 20230619_1880_Aki_TMTPro18x_K_F1 116.29 108.7 2694.6 1027.9 1572.7 1468.8 1606.4 3153.5 3022.8 2019.3 2433.4 1883.8 3021.5 2780 848.73 2339.9 2533.7 764.01 3186.4 2809.1 2474.8 948.61 1693.8 1468 1715.5 3030.1 2943.9 2139.5 2528.2 1940.6 2978.4 2764 1027 2340.1 2572.7 913.73 3039.8 2647.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24348000 18384 4668 17376 34849 27919 27919 1 9606 Homo sapiens -0.10032357803356717 MEGVEEK Acetyl (Protein N-term);Oxidation (M) 878.36915 0.36914855 3473 P18124 RPL7 60S ribosomal protein L7 yes yes 1 1 0 1 0 2 38.65 38.65 2 0.0044011 9055 20230619_1880_Aki_TMTPro18x_K_F1 77.741 54.812 256090 189770 232340 247880 311180 339350 287680 308780 398480 289490 332870 360940 334950 306930 320400 291490 421420 368940 236480 174280 239280 246700 316590 335450 294800 316930 396720 296020 344880 361200 341390 317550 331430 297640 401870 349800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 533930000 18385 3473 17377 34850;34851 27920;27921 27920 2117 2 9606 Homo sapiens -0.07490126133154718 MEGVEEK Acetyl (Protein N-term) 862.37423 0.37423392 3473 P18124 RPL7 60S ribosomal protein L7 yes yes 1 0 0 1 0 1 46.753 46.753 2 0.0035595 13006 20230619_1880_Aki_TMTPro18x_K_F1 84.244 50.505 345960 229400 286660 278230 349220 357000 325040 338310 394060 353850 372660 395520 452250 370690 355300 370180 482140 426180 319070 210620 296970 278080 357180 354670 331310 347210 396750 358170 386910 398680 454470 383310 370030 375140 459690 404400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 545460000 18386 3473 17377 34852 27922 27922 1 9606 Homo sapiens -0.062458222705458866 MEGVSALLAR Acetyl (Protein N-term) 1087.5696 0.56957969 4050 Q5SNT2;Q5SNT2-2 TMEM201 Transmembrane protein 201 yes no 1 0 0 4.5 0.5 1 1 63.792 63.819 2 0.00036274 19681 20230619_1885_Aki_TMTPro18x_K_F5 104.06 88.618 7619.4 6877 8179.6 6809.6 6561.3 6186.1 8871 9443.1 10874 10311 8266.9 10478 11313 8749.2 10010 10706 10958 13052 7054.2 6294.7 8229.4 6886.9 6997.1 6384.5 8873.8 9441.1 10866 10376 8754.1 10562 11384 9194.5 10258 10856 10490 12364 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40459000 18387 4050 17378 34853;34854 27923 27923 1 9606 Homo sapiens 0.02929768254307419 MEIATKDPLNPIK Oxidation (M) 1484.7909 0.79086543 3922 Q15181;V9HWB5;Q5SQT6 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 1 1 8 0 1 50.713 50.789 3 0.084841 13853 20230619_1888_Aki_TMTPro18x_K_F8 57.425 36.472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18388 3922 17379 34855 27924 27924 2597 1 9606 Homo sapiens 0.0678616344009697 MEIGTEISR Acetyl (Protein N-term) 1076.5172 0.51720977 3006 Q6PJT7;Q6PJT7-5;G3V256;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-10;Q6PJT7-11;A0A3B3IT62;G3V2X4 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 1 0 0 1 0 1 53.299 53.299 2 0.0015667 15711 20230619_1880_Aki_TMTPro18x_K_F1 91.783 65.181 14321 11341 15541 17227 16595 22192 20793 21220 22592 18804 21198 18907 20990 17273 20021 21274 20110 25579 13249 10431 15721 16969 17292 22020 20775 21675 22841 19143 21792 19152 21378 18095 20390 21548 19278 24230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20216000 18389 3006 17380 34856 27925 27925 1 9606 Homo sapiens -0.017988148793165237 MEIYRPHK Oxidation (M) 1088.5437 0.54369929 4305;2659 Q6IT96;B5BU61;Q13547;Q5TEE2;B4DSK9;Q92769;Q92769-3;B3KUJ5;H3BM24;A0A7R6V290;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;E5RK19 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 no no 0 1 1 1 0 1 33.824 33.824 4 0.040629 7488 20230619_1880_Aki_TMTPro18x_K_F1 80.219 68.505 70657 49087 61453 62140 62210 66072 70358 65586 85952 82038 97288 87576 89237 80090 68872 106120 108340 96473 65202 45078 63205 61743 64799 66513 70952 67491 87090 82217 98826 88485 90431 84199 72774 105570 103200 91776 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52786000 18390 2659;4305 17381 34857 27926 27926 1607 1 9606 Homo sapiens 0.0029691880267819215 MEIYRPHK Unmodified 1072.5488 0.54878467 4305;2659 Q6IT96;B5BU61;Q13547;Q5TEE2;B4DSK9;Q92769;Q92769-3;B3KUJ5;H3BM24;A0A7R6V290;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;E5RK19 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 no no 0 0 1 2 0 1 38.371 38.434 4 0.025312 9203 20230619_1881_Aki_TMTPro18x_K_F2 68.735 49.955 93475 64407 100110 106520 87203 98225 96943 95843 105330 162750 165700 185450 197240 167010 124940 205940 216810 218910 86400 59335 100980 103950 91857 99862 97535 99901 109490 161490 168580 186560 196930 174960 133830 206790 206570 207780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151040000 18391 2659;4305 17381 34858 27927 27927 1 9606 Homo sapiens 0.015412226653097605 MELEAMSR Acetyl (Protein N-term);Oxidation (M) 1023.4365 0.43651661 2958 F5GWH5;P61165 TMEM258 Transmembrane protein 258 yes no 1 1 0 1 0 1 44.805 44.805 2 0.014047 12224 20230619_1880_Aki_TMTPro18x_K_F1 64.265 61.137 13397 11420 16836 17982 14969 17747 20109 17870 24147 16496 20792 19844 18354 15983 17900 18658 20144 18905 12418 10505 16801 17609 15837 17955 20095 18223 24198 16861 21377 19871 18794 16751 18337 18720 19243 17958 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15737000 18392 2958 17382 34859 27928 27928 1754 1 9606 Homo sapiens -0.07426419193848233 MELEAMSR Acetyl (Protein N-term) 1007.4416 0.44160198 2958 F5GWH5;P61165 TMEM258 Transmembrane protein 258 yes no 1 0 0 1 0 1 54.732 54.732 2 0.00092402 16294 20230619_1880_Aki_TMTPro18x_K_F1 120.92 107.93 42163 35244 43252 46360 38609 55402 41896 42405 57176 47040 43138 46692 48249 42903 52700 44453 53525 50199 39000 32354 43807 46004 40686 54999 42531 44347 56811 47321 45184 47260 49314 44468 53506 45000 51181 47631 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268160000 18393 2958 17382 34860 27929 27929 1 9606 Homo sapiens -0.06182115331239402 MELENIVANTVLLK Acetyl (Protein N-term) 1627.8855 0.8854941 2855 D6RHX8;F8W9W2;Q96AD6;P43250-3;P43250;P43250-2;B2R7K0;P34947 GRK6;GRK5 G protein-coupled receptor kinase 6;G protein-coupled receptor kinase 5 yes no 1 0 0 6.5 0.5 1 1 69.13 69.163 2 0.00050252 21759 20230619_1887_Aki_TMTPro18x_K_F7 53.683 10.171 2007.7 1689.5 2492.8 1920.3 1961.7 3125.6 1632.6 1472.6 2678.8 1506.1 3267.9 2561.3 3657.1 2500.8 2049 2841.7 1813.9 2662.1 1860.5 1548.7 2480.8 1936.1 2079.7 3029.1 1699.9 1620.8 2686.5 1557.4 3334.2 2556.1 3637.7 2601.2 2103.7 2838 1743.7 2527.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2644000 18394 2855 17383 34861;34862 27930 27930 1 9606 Homo sapiens 0.0966667719144425 MELFLAGR Acetyl (Protein N-term);Oxidation (M) 993.49535 0.49535211 1484 A0A384NY14;Q7Z4W1;J3KS22;J3KRZ4 DCXR L-xylulose reductase yes no 1 1 0 3 0 1 58.959 58.988 2 1.1823E-06 17998 20230619_1882_Aki_TMTPro18x_K_F3 122.98 91.043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18395 1484 17384 34863 27931 27931 987 1 9606 Homo sapiens -0.0016557483721726385 MELFLAGR Acetyl (Protein N-term) 977.50044 0.50043749 1484 A0A384NY14;Q7Z4W1;J3KS22;J3KRZ4 DCXR L-xylulose reductase yes no 1 0 0 5 0.816 1 1 1 65.937 65.97 2 0.00027253 20551 20230619_1885_Aki_TMTPro18x_K_F5 125.86 97.345 7547.9 6349.9 8477.3 6729.8 6577.8 6614.7 7957.9 9012.1 9885.8 10918 9818.7 11573 8953.6 7822.8 8647.1 13057 9880.6 12229 6987.7 5817 8493.9 6774.6 7014.5 6757.4 8010.3 9086.7 9965.7 10943 10051 11588 9154.5 8466.8 8892.7 12975 9458 11615 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 99570000 18396 1484 17384 34864;34865;34866 27932;27933;27934 27933 3 9606 Homo sapiens 0.010787290253915671 MELGELLYNK Acetyl (Protein N-term);Oxidation (M) 1266.6166 0.61658946 4431 Q9BTE1;H3BUD2;H3BS05;B4DS97;H3BR94;Q9BTE1-3;Q9BTE1-2 DCTN5 Dynactin subunit 5 yes no 1 1 0 3.5 0.5 1 1 64.084 64.104 2 0.00010249 20058 20230619_1883_Aki_TMTPro18x_K_F4 73.26 34.112 10700 9435.8 10579 12438 10042 11354 13171 12091 12587 14721 11679 12487 15312 9809.1 12785 11670 12841 16233 9897.9 8660.7 10762 12298 10554 11580 13078 12376 12839 14661 12191 12674 15368 10332 13042 11954 12309 15358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66047000 18397 4431 17385 34867;34868 27935 27935 2772 1 9606 Homo sapiens -0.006054169852177438 MELGELLYNK Acetyl (Protein N-term) 1250.6217 0.62167484 4431 Q9BTE1;H3BUD2;H3BS05;B4DS97;H3BR94;Q9BTE1-3;Q9BTE1-2 DCTN5 Dynactin subunit 5 yes no 1 0 0 4 0.816 1 1 1 66.254 66.284 2 2.3589E-14 20905 20230619_1883_Aki_TMTPro18x_K_F4 166.96 152.55 29611 27453 33458 32854 20663 31222 31223 32254 28975 37076 36838 36188 40499 32679 34250 42911 39020 42442 27433 25169 33482 32726 22802 31703 30832 33011 29989 37163 37582 36672 40907 34377 35250 42904 37311 40304 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150560000 18398 4431 17385 34869;34870;34871 27936 27936 1 9606 Homo sapiens 0.0063888687741382455 MELITILEK Acetyl (Protein N-term);Oxidation (M) 1146.6206 0.62061221 3904 Q14974;B2RBR9;J3QR48 KPNB1 Importin subunit beta-1 yes no 1 1 0 3.8 1.17 1 1 1 2 66.32 66.348 2 2.6619E-06 20865 20230619_1883_Aki_TMTPro18x_K_F4 123.92 75.743 148110 115740 119750 137300 130310 134340 127130 127200 131280 139460 171580 161490 139890 127450 162220 161670 140150 170210 136700 106170 124240 136850 134420 135970 128570 130820 135090 140910 172730 161860 144840 134360 163360 162390 134510 161460 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 319450000 18399 3904 17386 34872;34873;34874;34875;34876 27937;27938;27939;27940;27941 27938 2579 5 9606 Homo sapiens 0.053166725085020516 MELITILEK Acetyl (Protein N-term) 1130.6257 0.62569758 3904 Q14974;B2RBR9;J3QR48 KPNB1 Importin subunit beta-1 yes no 1 0 0 5 1.41 1 1 1 1 1 68.864 68.899 2 2.2472E-05 21687 20230619_1885_Aki_TMTPro18x_K_F5 111.04 77.299 149570 115820 130300 123320 92415 119770 129020 134820 133670 145620 149620 152740 151950 135580 162060 167150 160390 177800 138110 106140 133370 123990 100150 121730 128200 136970 136580 146750 152940 154180 155520 142080 164560 168040 153600 168700 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 841650000 18400 3904 17386 34877;34878;34879;34880;34881 27942;27943;27944;27945;27946 27944 5 9606 Homo sapiens 0.0656097637113362 MELLAHLLGEK Unmodified 1252.6849 0.6849438 3962 Q2NLC8;Q6FII1;Q9Y2Q3-4;Q9Y2Q3-3;Q9Y2Q3;Q9Y2Q3-2 GSTK1;LOC51064 Glutathione S-transferase kappa 1 yes no 0 0 0 2 0 1 63.786 63.794 3 0.079653 20304 20230619_1881_Aki_TMTPro18x_K_F2 50.145 34.943 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18401 3962 17387 34882 27947 27947 1 9606 Homo sapiens 0.06870872385297844 MELQEIQLK Unmodified 1130.6005 0.60054547 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;A0A494C0P6;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;P06753-7;Q8NAH0;Q5VU62 TPM3;DKFZp686J1372;TPM3-ROS1;HEL-S-82p Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor no no 0 0 0 5.5 0.5 2 2 57.209 57.274 2;3 0.00049835 16949 20230619_1886_Aki_TMTPro18x_K_F6 112.75 0 148440 129540 143650 171330 211710 289600 248990 238660 320440 235300 211870 222830 252270 207200 225910 267100 245050 264090 137280 118910 147660 171020 216050 282470 250820 247120 317900 237850 224340 226290 254960 217480 231470 267150 234410 250800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 612370000 18402 1095;1096 17388 34883;34884;34885;34886 27948;27949;27950 27950 3 9606 Homo sapiens 0.04046921568533435 MELQEMQLK Unmodified 1148.557 0.55696609 3405 Q5TCU3;P07951;V9HW25;CON__Q3SX28;A7XZE4;P07951-2;B4DGC2;P07951-3;B4E3P1 TPM2;HEL-S-273;TPM2b Tropomyosin beta chain yes no 0 0 0 5.5 0.5 1 1 55.238 55.308 3 0.00030322 15957 20230619_1885_Aki_TMTPro18x_K_F5 119.21 0 + 154930 128480 140910 150900 154440 198160 192020 191140 217050 172610 153400 155050 188370 147710 155010 190220 165080 167810 143160 117810 144640 151190 160610 196550 192120 195190 217100 174990 161930 158020 189510 154900 158970 189120 157870 159620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 467490000 18403 3405 17389 34887;34888 27951;27952 27951 2 9606 Homo sapiens -0.011370112002396127 MELQPPEASIAVVSIPR Acetyl (Protein N-term) 1877.9921 0.99208444 1704 P08195-4;P08195-5;P08195;P08195-3;A0A7P0Z4P5;A0A7P0TAN7;A0A7P0Z4A0;A0A7P0T9F7;F5GZS6;A0A7P0TAT7 SLC3A2 4F2 cell-surface antigen heavy chain yes no 1 0 0 5 0 1 64.899 64.944 3 0.00026344 20120 20230619_1885_Aki_TMTPro18x_K_F5 71.697 63.184 8687.7 6675.5 7069.7 9108.2 9910.4 12661 11138 10636 11701 9206.1 9371 12184 13025 11584 9127.4 12446 12630 13689 8017.8 6132.6 7375.8 9037.9 10118 12479 11168 10968 11793 9478.5 9901.3 12209 13000 12012 9561.4 12554 12058 12985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26740000 18404 1704 17390 34889 27953 27953 1 9606 Homo sapiens 0.08820807685970067 MELSAEYLR Acetyl (Protein N-term);Oxidation (M) 1168.5434 0.54342452 4509 Q9H3K6;H3BTW0;H3BVE0;Q9H3K6-2;A0A087WZT3;H3BPT9 BOLA2;BOLA2B BolA-like protein 2 yes no 1 1 0 1.5 0.5 1 1 53.444 53.458 2 0.0013626 15813 20230619_1880_Aki_TMTPro18x_K_F1 95.741 61.945 16285 16916 16195 19793 16014 25595 22585 25621 25587 16753 14012 17030 19325 10815 22253 18262 16754 13876 15083 15500 16494 19827 16888 25417 22477 25921 25414 17420 15188 17065 19656 11772 22249 18000 16063 13236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115890000 18405 4509 17391 34890;34891 27954 27954 2802 1 9606 Homo sapiens -0.03410545707856727 MELSAEYLR Acetyl (Protein N-term) 1152.5485 0.5485099 4509 Q9H3K6;H3BTW0;H3BVE0;Q9H3K6-2;A0A087WZT3;H3BPT9 BOLA2;BOLA2B BolA-like protein 2 yes no 1 0 0 1.5 0.5 1 1 62.057 62.062 2 0.0010504 19540 20230619_1881_Aki_TMTPro18x_K_F2 94.114 61.76 46260 32752 43004 39359 41701 49805 44951 42151 44332 49679 49274 48241 50329 42363 47054 50717 57812 49777 42715 30059 43917 39353 43534 49390 45131 43792 45430 49754 50368 48838 51184 44338 48515 50772 55154 47318 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132840000 18406 4509 17391 34892;34893 27955 27955 1 9606 Homo sapiens -0.021662418452251586 MELSAVGER Acetyl (Protein N-term) 1032.491 0.49099502 4549 Q9HC52;B3KT27;B0QXZ6;O95503 CBX8;CBX6 Chromobox protein homolog 8;Chromobox protein homolog 6 yes no 1 0 0 1 0 1 51.57 51.57 2 0.004974 15008 20230619_1880_Aki_TMTPro18x_K_F1 75.696 49.959 26956 22026 26152 24089 24243 32674 28827 25445 33044 32593 33174 38846 36491 28833 29197 38384 36021 37308 24919 20186 26601 24279 25508 32215 28928 26693 33436 32751 34207 38794 36782 30579 30246 38331 34407 35442 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18048000 18407 4549 17392 34894 27956 27956 1 9606 Homo sapiens -0.023950840507950488 MELSDANLQTLTEYLK Acetyl (Protein N-term);Oxidation (M) 1925.9292 0.92920941 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;P55060-2 CSE1L Exportin-2 yes no 1 1 0 4.25 1.48 1 1 1 1 66.227 66.253 3 1.6251E-06 20672 20230619_1885_Aki_TMTPro18x_K_F5 73.887 61.721 68884 61492 59407 67032 81377 80986 69922 75419 70204 80501 102600 104060 97542 76812 89614 104900 79538 108210 63659 56334 61496 67436 82425 80752 71220 77556 72827 81754 103530 103690 99252 81629 90811 105100 76398 102640 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 275650000 18408 1462 17393 34895;34896;34897;34898 27957;27958;27959 27958 966 3 9606 Homo sapiens 0.003281971072738088 MELSDANLQTLTEYLK Acetyl (Protein N-term) 1909.9343 0.93429479 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;P55060-2 CSE1L Exportin-2 yes no 1 0 0 5 1.41 1 1 1 1 1 67.69 67.722 3 5.0485E-11 21418 20230619_1886_Aki_TMTPro18x_K_F6 104.17 99.276 95616 81087 105320 110430 84615 109420 101390 109600 114110 141130 122770 123780 152930 116230 117040 151710 136100 150020 88508 74463 105910 109090 90086 110670 101730 112770 116060 140360 126850 126190 153330 122110 120900 151680 130130 142460 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 300840000 18409 1462 17393 34899;34900;34901;34902;34903 27960;27961;27962;27963 27962 4 9606 Homo sapiens 0.015725009698826398 MELVQVLK Acetyl (Protein N-term) 1000.5627 0.5627034 4003 Q53HG1;Q9UI09;A0A804HJF8;A0A804HK60;F8VRD8;A0A804HHX9;H0YID5;Q9UI09-2;F8VXI1 NDUFA12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes no 1 0 0 6.5 0.5 1 1 65.819 65.853 2 0.0036962 20681 20230619_1886_Aki_TMTPro18x_K_F6 81.958 67.964 93443 77691 88061 106390 94344 115250 112690 112370 128820 94757 101200 89845 118690 100050 80602 136820 128330 119960 86372 71354 90137 105150 98099 115740 113030 114530 129120 96648 105770 91953 118840 104800 85574 135780 122270 114150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139800000 18410 4003 17394 34904;34905 27964;27965 27964 2 9606 Homo sapiens 0.06244455373735036 MEMINVSGYVAQEK Unmodified 1597.748 0.74801434 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 7.5 0.5 1 1 60.056 60.097 3 5.2255E-07 17839 20230619_1887_Aki_TMTPro18x_K_F7 135.14 113.58 62875 58715 71534 65483 68279 79328 79291 70390 88157 74150 72472 80702 85484 50993 79164 88024 82353 97802 58256 53792 71873 65788 71481 78969 79566 72652 88664 74948 75732 80621 86395 55654 80840 88359 78870 92733 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78996000 18411 2417 17395 34906;34907 27966 27966 1 9606 Homo sapiens -0.026949746796390173 MENAHTK Acetyl (Protein N-term) 871.3858 0.38580166 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;A0A0S2Z3H0;A0A0S2Z425;J3QSY6 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 1 0 0 2 0 1 31.335 31.398 2 0.024641 6250 20230619_1881_Aki_TMTPro18x_K_F2 53.554 49.198 19462 10038 21801 25585 34126 37553 24070 33141 25198 17311 29547 35433 24141 24732 30868 10824 34497 29360 17973 9328.5 22156 24677 34195 36924 24918 33715 25745 18893 29929 34747 25158 25124 31354 12209 32936 27709 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14705000 18412 1076 17396 34908 27967 27967 1 9606 Homo sapiens -0.05503580456547752 MENGYTYEDYK Acetyl (Protein N-term);Oxidation (M) 1469.5657 0.5656761 3373 V9HWH6;Q8N7G1;P00491;G3V2H3 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 1 1 0 2 0 1 50.765 50.817 2 0.010856 14825 20230619_1881_Aki_TMTPro18x_K_F2 58.433 48.202 75004 59546 67991 70550 79566 85766 78671 75029 86919 101660 92721 107350 109670 87587 91349 118040 111380 115400 69288 54617 69837 70548 81711 85346 79633 78104 88438 101460 95693 108000 110500 92630 94466 117900 106410 109620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21633000 18413 3373 17397 34909 27968 27968 1973 1 9606 Homo sapiens -0.15032410820731457 MENGYTYEDYK Acetyl (Protein N-term) 1453.5708 0.57076148 3373 V9HWH6;Q8N7G1;P00491;G3V2H3 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 1 0 0 2 0 1 55.957 55.976 2 0.0035929 16988 20230619_1881_Aki_TMTPro18x_K_F2 58.433 50.394 90016 71278 88969 95669 79132 110730 102310 97011 108060 127050 117540 121620 139950 102460 117740 133280 135500 134580 83210 65462 90396 94780 83770 110430 102000 100860 110260 126590 121150 123030 140960 108050 121180 133470 129470 127820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27407000 18414 3373 17397 34910 27969 27969 1 9606 Homo sapiens -0.13788106958122626 MENQVLTPHVYWAQR Acetyl (Protein N-term);Oxidation (M) 1928.9203 0.92031648 3075 H3BS72;Q9P035;Q9P035-2 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 1 1 0 6 0 1 53.114 53.192 2 3.1299E-20 15267 20230619_1886_Aki_TMTPro18x_K_F6 152.07 152.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18415 3075 17398 34911 27970 27970 1796 1 9606 Homo sapiens -0.00698686947907845 MENQVLTPHVYWAQR Acetyl (Protein N-term) 1912.9254 0.92540185 3075 H3BS72;Q9P035;Q9P035-2 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 1 0 0 7 0 1 58.03 58.083 2 2.5327E-18 17017 20230619_1887_Aki_TMTPro18x_K_F7 136.96 129.9 35967 34633 38191 36631 30212 32701 33282 33091 32478 44787 37377 42014 50097 32367 41766 46325 40055 39488 33311 31712 38474 36805 32076 33400 33387 34100 33411 44518 38709 42426 50250 34483 42546 45934 38337 37580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47576000 18416 3075 17398 34912 27971 27971 1 9606 Homo sapiens 0.005456169147237233 MENSQLCK Acetyl (Protein N-term);Oxidation (M) 1066.4423 0.44233027 3836 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 1 1 0 1.5 0.5 1 1 39.737 39.772 2 0.00045843 9716 20230619_1881_Aki_TMTPro18x_K_F2 110.63 107.38 163850 121730 150320 149180 179750 187810 184430 155140 200980 199980 189070 219020 195620 183120 152880 213240 265480 200650 151320 111720 154260 148910 184450 186280 186120 162020 203440 200330 195000 220110 197670 191550 162720 212940 252470 190950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 399540000 18417 3836 17399 34913;34914 27972 27972 2512 1 9606 Homo sapiens -0.08823320682176927 MENSQLCK Acetyl (Protein N-term) 1050.4474 0.44741564 3836 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 1 0 0 2.5 0.5 1 1 46.541 46.62 2 0.0008924 12622 20230619_1882_Aki_TMTPro18x_K_F3 106.42 105.32 163480 126020 152860 138560 159950 202690 159820 181560 180290 197910 220450 187760 232220 214840 183340 223020 257000 216590 151030 115520 156210 139820 165840 199560 161920 187210 184200 198860 224530 192160 234470 221090 191560 223540 244910 205940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 364100000 18418 3836 17399 34915;34916 27973 27973 1 9606 Homo sapiens -0.07579016819568096 MEPDETVK Unmodified 947.427 0.42699778 450 A8K1J3;A0A024R7G8;P54725-3;P54725;A0A494C0B4;P54725-2;K7ENJ0;K7ELW1 RAD23A UV excision repair protein RAD23 homolog A yes no 0 0 0 2 0 1 42.684 42.765 2 0.0021653 11122 20230619_1881_Aki_TMTPro18x_K_F2 131.06 88.953 60192 38159 74318 76831 90217 98363 80087 97207 88738 72517 103550 114820 95506 94192 101630 51294 119440 116460 55687 35270 74571 74631 92134 97722 81679 98682 90417 75898 105290 113830 98110 95589 103930 56060 114090 109940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54537000 18419 450 17400 34917 27974 27974 1 9606 Homo sapiens -0.04881864207743547 MEPDGTYEPGFVGIR Acetyl (Protein N-term);Oxidation (M) 1724.7716 0.77158655 3559 P36954;K7EKS1;K7EK49 POLR2I DNA-directed RNA polymerase II subunit RPB9 yes no 1 1 0 1 0 1 59.046 59.046 2 0.050804 18101 20230619_1880_Aki_TMTPro18x_K_F1 43.544 41.404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18420 3559 17401 34918 27975 27975 2224 1 9606 Homo sapiens -0.061808376415001476 MEPEQMLEGQTQVAENPHSEYGLTDNVER Acetyl (Protein N-term) 3372.4874 0.48744914 4479 Q9C005;B4DIS3 DPY30;LOC84661 Protein dpy-30 homolog yes no 1 0 0 2 0 1 60.491 60.502 3 4.1425E-29 18817 20230619_1881_Aki_TMTPro18x_K_F2 164.96 154.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18421 4479 17402 34919 27976 27976 1 9606 Homo sapiens -0.10389508470552755 MEPGPDGPAASGPAAIR Acetyl (Protein N-term);Oxidation (M) 1650.7672 0.76716988 3479 P19623;K7EKM4 SRM Spermidine synthase yes no 1 1 0 1 0 1 44.528 44.528 2 3.4535E-23 12099 20230619_1880_Aki_TMTPro18x_K_F1 197.07 170.56 12852 9877.3 11813 12514 11810 16003 13928 16525 22182 13999 15223 16542 16533 13710 13239 17051 16058 16030 11872 9066.9 12096 12468 12367 15918 14174 16768 21824 14375 16006 16585 16679 14409 13697 17013 15337 15236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45362000 18422 3479 17403 34920 27977 27977 2124 1 9606 Homo sapiens -0.032183020643742566 MEPGPDGPAASGPAAIR Acetyl (Protein N-term) 1634.7723 0.77225526 3479 P19623;K7EKM4 SRM Spermidine synthase yes no 1 0 0 1.5 0.5 1 1 50.532 50.558 2 0.0017278 14715 20230619_1881_Aki_TMTPro18x_K_F2 72.327 51.425 54375 49953 51650 60232 59072 70838 65105 61983 68166 69515 66737 60410 69652 57525 63359 64595 63643 68930 50296 45801 52872 60109 60975 70613 65379 64136 69245 69583 68629 61650 70677 59838 64563 65042 60927 65405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104890000 18423 3479 17403 34921;34922 27978 27978 1 9606 Homo sapiens -0.019739982017426883 MEPLNNLQVAVK Unmodified 1354.7279 0.72787125 1172;3819 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087X253;B4DWG4;B4E261;Q96EL6;B4DIL5;Q10567-4;Q10567-3;Q10567-2;Q10567;B4DS79;B4DG47;Q7Z3M8;B4DKH5 AP2B1;DKFZp781K0743;AP1B1;DKFZp686A01208 AP-2 complex subunit beta;AP complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 1 0 1 57.78 57.78 2 9.4105E-12 17586 20230619_1880_Aki_TMTPro18x_K_F1 190.86 146.41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18424 1172;3819 17404 34923 27979 27979 1 9606 Homo sapiens 0.06469642442698387 MEQERQEQEER Unmodified 1490.642 0.64196936 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;B3KSQ7 DBN1 Drebrin yes no 0 0 1 1 0 1 27.302 27.302 3 0.047945 4926 20230619_1880_Aki_TMTPro18x_K_F1 72.34 49.461 5311.5 4435.4 6353.2 6324.5 11051 7168.1 5265.1 7406.6 5001.5 5199.6 8457.2 6926.3 5970.4 7485.1 8618.7 2366.6 8533.6 7997 4920 4075.4 6428.1 6242.4 10909 7201.4 5648.7 7485.7 5250.1 5423.8 8400.2 6971 6311.8 7429.7 8677 2797.5 8162 7537.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22265000 18425 1396 17405 34924 27980 27980 1 9606 Homo sapiens -0.0837259420072769 MEQVNELK Acetyl (Protein N-term);Oxidation (M) 1047.4907 0.49066067 2088 V9HW72;A8K690;P31948;P31948-3;F5H783;F5GXD8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 1 1 0 1.5 0.5 1 1 46.237 46.277 2 0.001291 12805 20230619_1880_Aki_TMTPro18x_K_F1 82.241 70.393 698430 570420 679240 722190 702320 707080 686910 676720 750810 830630 943220 901060 852910 732060 732760 897240 920220 962480 645670 523490 692030 716660 726790 715710 695880 697780 769190 833130 954270 905960 867730 769490 758520 902140 878940 913320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 359250000 18426 2088 17406 34925;34926 27981;27982 27981 1319 2 9606 Homo sapiens -0.031185037706336516 MEQVNELK Acetyl (Protein N-term) 1031.4957 0.49574604 2088 V9HW72;A8K690;P31948;P31948-3;F5H783;F5GXD8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 1 0 0 1.33 0.471 2 1 54.661 54.673 2 0.00021486 16427 20230619_1881_Aki_TMTPro18x_K_F2 130.77 111.98 559200 451820 474490 492430 371910 479490 478170 487870 523050 611260 587990 618230 675850 620140 589850 733090 696570 689250 516390 414070 487660 494050 398060 486070 477640 501170 533390 611260 604280 627410 683290 645340 607980 732040 665390 655150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 794150000 18427 2088 17406 34927;34928;34929 27983;27984 27984 2 9606 Homo sapiens -0.018741999080248206 MESAGLEQLLR Acetyl (Protein N-term) 1287.6493 0.64928657 2382 Q8TEX9-2;Q8TEX9;B3KQ33;H0YN14;H0YLV0;H0YL92;H0YKG5;H0YK93 IPO4 Importin-4 yes no 1 0 0 3 0.816 1 1 1 64.365 64.381 2 6.4753E-17 20297 20230619_1882_Aki_TMTPro18x_K_F3 164.96 142.82 12323 8988.1 13599 15361 9352.3 12652 10321 13831 16572 14096 11562 11532 14733 8371.1 16034 11341 13400 14292 11397 8282 13654 14944 10105 13012 10558 14050 16331 14154 12241 11710 14968 8924.8 16110 11527 12853 13540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49241000 18428 2382 17407 34930;34931;34932 27985 27985 1 9606 Homo sapiens 0.016967901376347072 MESAIAEGGASR Acetyl (Protein N-term) 1219.5503 0.55030081 3752 P78344;P78344-2;H0YCH5;H0YEC5;H0YD77;H0YCF8;H0YDC0;H0YEN8;H0YD99;H0YEI7;H0YE87 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes no 1 0 0 1 0 1 46.078 46.078 2 1.0007E-09 12727 20230619_1880_Aki_TMTPro18x_K_F1 124.81 109.37 27701 19092 21515 27658 25310 35813 27567 25887 36552 31931 30811 30493 33843 32263 29653 34505 37474 35590 25542 17559 22475 27306 26145 35337 27928 27297 36496 31934 32009 31082 34281 33330 30684 34688 35767 33799 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70232000 18429 3752 17408 34933 27986 27986 1 9606 Homo sapiens -0.05069232827236192 MESALDQLK Unmodified 1033.5114 0.51139611 1232 A0A140VK56;P37837-2;P37837;F2Z393;B4DID5;E9PM01;E9PKI8 TALDO1 Transaldolase yes no 0 0 0 5.5 0.5 1 1 55.485 55.556 2 6.8545E-05 16078 20230619_1885_Aki_TMTPro18x_K_F5 160.74 103.64 262350 223370 251650 245390 253930 299810 291310 289620 341070 233290 242640 217080 248400 203040 261770 271920 274690 231320 242570 204680 256560 246850 264800 298800 293040 295030 340370 238510 253740 220900 253990 213540 266700 269860 262400 220300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113590000 18430 1232 17409 34934;34935 27987;27988 27987 2 9606 Homo sapiens -0.004019133909878292 MESCLAQVLQK Unmodified 1305.6421 0.64209271 1818 Q7Z460;Q7Z460-3;Q7Z460-5;Q7Z460-4;Q7Z460-2;A0A8V8TLP7;F8WA11;A0A8V8TQK9;A0A8V8TRF6;Q07A21 CLASP1 CLIP-associating protein 1 yes no 0 0 0 1 0 1 61.069 61.069 3 0.0037417 18931 20230619_1880_Aki_TMTPro18x_K_F1 72.096 56.556 25032 20928 24111 24714 23383 26048 26630 25113 25715 26141 29561 24133 26322 24476 29186 27618 25869 23844 23143 19191 24562 24671 24428 26221 26641 25754 26399 26304 29980 24627 27110 25390 29436 27503 24770 22695 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27275000 18431 1818 17410 34936 27989 27989 1 9606 Homo sapiens 0.001497342655511602 MESDFYLR Acetyl (Protein N-term);Oxidation (M) 1117.475 0.4750106 3696 P61326;P61326-2 MAGOH Protein mago nashi homolog yes no 1 1 0 1 0 1 53.057 53.057 2 0.00073865 15596 20230619_1880_Aki_TMTPro18x_K_F1 150.02 118.73 22596 14535 18056 22597 17526 21316 22738 21614 27069 17424 16576 21207 20197 20033 19983 26339 22172 30418 20831 13384 18743 22126 18418 21643 22745 21962 26885 17969 17697 21324 20518 21029 20483 26571 21250 28818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84732000 18432 3696 17411 34937 27990 27990 2386 1 9606 Homo sapiens -0.07902790287698735 MESDFYLR Acetyl (Protein N-term) 1101.4801 0.48009598 3696 P61326;P61326-2 MAGOH Protein mago nashi homolog yes no 1 0 0 1 0 1 60.973 60.973 2 0.0036603 18851 20230619_1880_Aki_TMTPro18x_K_F1 104.76 87.378 51327 45334 51270 59778 55876 63444 51999 59520 68194 49589 48281 40094 43075 39859 57808 54697 60283 48730 47484 41610 52203 59211 57614 63772 53173 60796 67717 50400 50220 41186 44871 41896 58639 54403 57575 46389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59798000 18433 3696 17411 34938 27991 27991 1 9606 Homo sapiens -0.06658486425089905 MESGSTAASEEAR Acetyl (Protein N-term) 1366.5671 0.56707309 2223 P10644;B2R5T5;Q68DQ4;K7EM13;P10644-2;K7EPB2;K7EMZ6;K7EPR5;K7EJ40;K7EK41;A6YCE1;K7EIE5;K7EMU2;A6YCE2;K7EQK3;Q96P62;Q15300;X6RAV4 PRKAR1A;DKFZp779L0468;PRKAR1A/RARA fusion;RET/PTC2 cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 1 0 0 1 0 1 35.391 35.391 2 5.0204E-16 8154 20230619_1880_Aki_TMTPro18x_K_F1 143.4 112.32 7470.6 5461.1 6681.8 9375.8 9598.2 10519 13849 11175 7627.2 7769.9 12560 12146 12172 9163.8 11706 7430.9 14379 10423 6897.2 5032.4 6919.6 9152.4 9834.2 10557 13516 11290 8308.5 8161 12641 12032 12404 9465.8 12032 7678.6 13705 9882.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17776000 18434 2223 17412 34939 27992 27992 1 9606 Homo sapiens -0.10154776731951642 MESGSTAASEEAR Acetyl (Protein N-term);Oxidation (M) 1382.562 0.56198771 2223 P10644;B2R5T5;Q68DQ4;K7EM13;P10644-2;K7EPB2;K7EMZ6;K7EPR5;K7EJ40;K7EK41;A6YCE1;K7EIE5;K7EMU2;A6YCE2;K7EQK3;Q96P62;Q15300;X6RAV4 PRKAR1A;DKFZp779L0468;PRKAR1A/RARA fusion;RET/PTC2 cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 1 1 0 1 0 1 28.761 28.761 2 0.0037284 5509 20230619_1880_Aki_TMTPro18x_K_F1 69.01 66.856 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18435 2223 17412 34940 27993 27993 1383 1 9606 Homo sapiens -0.11399080594583211 MESQEPTESSQNGK Acetyl (Protein N-term);Oxidation (M) 1608.6573 0.65734466 1968 A6NFX8;Q9UKK9;A6NJU6;A6NCQ0;C9JYY9 NUDT5 ADP-sugar pyrophosphatase yes no 1 1 0 1 0 1 34.789 34.789 2 2.5828E-08 7912 20230619_1880_Aki_TMTPro18x_K_F1 111.65 107.63 2248.3 1887.3 3415.5 1850.4 3688.6 4850.7 2857.1 3741 3634.2 2919.9 3409 4526.8 3731.6 2689.9 3729.6 2492.3 4688.8 4182.8 2088.3 1727.8 3367.7 1914.4 3792 4649.7 2957.3 3870.7 3648.6 3043.8 3530.5 4454.3 3795.9 2828.4 3837.9 2606.3 4473.4 3956.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5638000 18436 1968 17413 34941 27994 27994 1246 1 9606 Homo sapiens -0.12263772194205558 MESQLSASKPTGGLPETAR Oxidation (M) 1974.9681 0.96805453 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;A0A804HL78;O94854 MACF1;KIAA0754 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5;Uncharacterized protein KIAA0754 yes no 0 1 1 7 0 1 42.638 42.713 3 9.6852E-05 10371 20230619_1887_Aki_TMTPro18x_K_F7 88.071 78.655 23891 19974 26377 28768 29971 32257 31174 32149 31767 34257 39374 36890 33640 30907 32622 40602 37562 33191 22113 18355 26658 28366 30859 32343 31392 32903 32635 34577 39773 37151 34484 32565 33507 40211 35861 31619 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19986000 18437 1566 17414 34942 27995 27995 1027 1 9606 Homo sapiens 0.019569224615906933 MESVFNHAIR Unmodified 1202.5866 0.58662674 4154 Q7L576;X5D2F4;A0A087WVZ5;B3KWV6;A0A0G2JQT1;A0A0G2JR96;A0A0G2JQH3 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 1 0 1 46.634 46.634 3 2.2774E-07 12983 20230619_1880_Aki_TMTPro18x_K_F1 157.66 125.19 11787 11441 13901 13340 13332 17205 16984 16877 18399 18336 12604 16482 15844 14497 14778 19953 18788 17199 10928 10485 13940 13371 14003 17091 16953 17296 18450 18395 13377 16736 16034 15301 15295 19794 17927 16370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17195000 18438 4154 17415 34943 27996 27996 1 9606 Homo sapiens -0.006563111399145782 MESYDVIANQPVVIDNGSGVIK Acetyl (Protein N-term);Oxidation (M) 2405.1784 0.17844124 1483 A0A384NQ21;P61163;R4GMT0;B4DM97;A0A1B0GVS3 ACTR1A Alpha-centractin yes no 1 1 0 3.5 0.5 1 1 63.1 63.119 3 3.8006E-18 19645 20230619_1883_Aki_TMTPro18x_K_F4 84.249 74.052 18760 17450 13970 16970 17413 21509 18372 19532 24565 19603 21296 23265 22725 18207 22953 23788 24264 25260 17325 15969 14663 17243 17882 21364 18656 20087 24530 19928 22082 23281 23155 19248 23413 23895 23210 23973 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114020000 18439 1483 17416 34944;34945 27997 27997 983 1 9606 Homo sapiens 0.03205915273156279 MESYDVIANQPVVIDNGSGVIK Acetyl (Protein N-term) 2389.1835 0.18352661 1483 A0A384NQ21;P61163;R4GMT0;B4DM97;A0A1B0GVS3 ACTR1A Alpha-centractin yes no 1 0 0 4 0 1 64.42 64.428 3 8.7865E-17 20200 20230619_1883_Aki_TMTPro18x_K_F4 72.644 62.268 10788 5696.7 9352.8 7556.1 5266.7 8882.8 7122 8285.5 9657.5 10288 10333 9354.4 11083 10828 9927.2 10226 12396 12546 9942.6 5241.4 9549.3 7499.5 5877.3 8858.8 7163 8553.8 9724.6 10264 10595 9590.4 11244 11089 10252 10415 11837 11891 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33927000 18440 1483 17416 34946 27998 27998 1 9606 Homo sapiens 0.04450219135787847 MESYHKPDQQK Acetyl (Protein N-term);Oxidation (M) 1447.6402 0.64017845 3523 V9HWD9;Q53EM5;P29401;P29401-2;B3KSI4;E9PFF2;A0A0S2Z5C0;F8W888;A0A0S2Z4T2;F8WAX4 HEL107;TKT Transketolase yes no 1 1 1 6 0 1 34.54 34.586 3 0.00087624 7469 20230619_1886_Aki_TMTPro18x_K_F6 69.979 50.921 18799 16470 21522 20130 24792 25865 26682 22941 39894 26543 36633 36625 32464 31217 30316 38345 40730 36711 17411 15105 21679 20107 25547 25658 27183 23747 39696 26976 37548 36563 33203 32727 31484 38306 38842 34901 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18359000 18441 3523 17417 34947 27999 27999 2187 1 9606 Homo sapiens -0.06573603218703283 MESYHKPDQQK Acetyl (Protein N-term) 1431.6453 0.64526383 3523 V9HWD9;Q53EM5;P29401;P29401-2;B3KSI4;E9PFF2;A0A0S2Z5C0;F8W888;A0A0S2Z4T2;F8WAX4 HEL107;TKT Transketolase yes no 1 0 1 7 0 1 38.594 38.658 3 0.00023951 8706 20230619_1887_Aki_TMTPro18x_K_F7 59.067 46.087 14959 10254 15852 17710 15532 16968 17601 18777 26209 23447 24761 25550 26538 19695 16489 27580 25408 24473 13825 9452.5 16036 17253 16226 17247 17894 19181 26148 23512 25536 25646 26539 20932 17498 27381 24218 23281 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13093000 18442 3523 17417 34948 28000 28000 1 9606 Homo sapiens -0.053292993560944524 METASELGREEEDDVDLELR Unmodified 2335.0485 0.048549275 4090 Q68CN2;Q71SV8;Q9HCS7 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 yes no 0 0 1 1 0 1 55.757 55.757 3 1.9351E-30 16743 20230619_1880_Aki_TMTPro18x_K_F1 216.3 194.91 26414 23143 29052 28347 26660 35994 31668 35392 37046 34621 29894 37718 39049 32501 33521 38845 37428 45461 24455 21226 29263 28307 28065 35783 31817 36158 37168 35125 31464 37950 39303 34047 34430 39285 35829 43079 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156750000 18443 4090 17418 34949 28001 28001 1 9606 Homo sapiens -0.06557305796559376 METEQPEETFPNTETNGEFGK Acetyl (Protein N-term);Oxidation (M) 2472.0275 0.027479482 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;A0A994J795;S4R457 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 1 1 0 1 0 1 57.141 57.141 3 1.2557E-05 17264 20230619_1880_Aki_TMTPro18x_K_F1 69.361 68.123 44068 32762 37404 46512 41859 45852 48582 50506 45663 52864 52815 54967 53225 45735 46448 56170 50556 63092 40674 30115 38677 45816 43302 46509 48514 51336 47006 53331 53885 55388 53986 48045 47637 56633 48419 59806 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 312530000 18444 1865 17419 34950 28002 28002 1197 1 9606 Homo sapiens -0.14965315896188258 METEQPEETFPNTETNGEFGK Acetyl (Protein N-term) 2456.0326 0.032564859 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;A0A994J795;S4R457 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 1 0 0 1 0 1 61.116 61.116 3 3.3851E-16 18917 20230619_1880_Aki_TMTPro18x_K_F1 85.146 78.271 40762 34868 36204 41053 32688 56102 45871 43649 49084 56608 45002 56130 66238 55039 55554 58639 54038 64206 37667 31971 37165 41136 34752 55253 45577 45793 49734 56507 47377 56911 66408 57022 56613 59177 51788 60887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216850000 18445 1865 17419 34951 28003 28003 1 9606 Homo sapiens -0.13721012033602165 METFDPTELPELLK Acetyl (Protein N-term);Oxidation (M) 1719.8277 0.82770445 1575 B2RBY4;A0A5F9ZHB6;P49642;F8VSB2;F8VNY2 PRIM1 DNA primase;DNA primase small subunit yes no 1 1 0 2.5 0.5 2 2 66.416 66.438 2;3 0.0082866 21117 20230619_1882_Aki_TMTPro18x_K_F3 49.12 36.14 9381.8 7060.9 7729.1 8751.6 6811.6 9149.5 9182.9 10985 9350.4 11414 9977.3 11406 10329 7588.9 9726.3 10145 10336 11117 8658.1 6480.6 7984 8706.6 7227 9258.8 9132.9 11100 9552.5 11500 10234 11441 10493 8096.7 9937.1 10207 9888.9 10545 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 14735000 18446 1575 17420 34952;34953;34954;34955 28004;28005 28005 1030 2 9606 Homo sapiens -0.003416295246779555 METFDPTELPELLK Acetyl (Protein N-term) 1703.8328 0.83278983 1575 B2RBY4;A0A5F9ZHB6;P49642;F8VSB2;F8VNY2 PRIM1 DNA primase;DNA primase small subunit yes no 1 0 0 3.5 1.12 1 1 1 1 67.949 67.977 3 0.030809 21722 20230619_1882_Aki_TMTPro18x_K_F3 49.12 33.028 18044 19225 16453 16433 13636 16934 17788 19885 20219 19067 21257 19013 22008 21054 18331 21748 19144 18311 16704 17569 16806 16857 14518 17165 17781 20080 20494 19314 21775 19389 22276 21671 18768 21647 18303 17431 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 9735800 18447 1575 17420 34956;34957;34958;34959 28006;28007 28007 2 9606 Homo sapiens 0.009026743379536128 METILEQQR Acetyl (Protein N-term) 1188.5809 0.58087266 2066 B3KY12;A8K7V1;A8K566;Q12874;Q53HM6;B4DW90 SF3A3 Splicing factor 3A subunit 3 yes no 1 0 0 2 0.816 1 1 1 57.99 58.005 2 3.2085E-17 17720 20230619_1880_Aki_TMTPro18x_K_F1 178.08 155.95 43958 36805 42065 39140 39517 51691 45953 47629 56806 44912 42223 52364 51034 42765 47203 53914 53713 55325 40638 33718 42844 39525 41505 51213 46298 48852 56656 45783 44467 52475 51636 45019 48462 54059 51341 52527 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 255420000 18448 2066 17421 34960;34961;34962 28008;28009 28008 2 9606 Homo sapiens -0.005874544422113104 MEVAANCSLR Acetyl (Protein N-term) 1191.5376 0.53762763 4394 Q96RS6;A0A7I2V457;A0A7I2V4C4;E5RGX7 NUDCD1 NudC domain-containing protein 1 yes no 1 0 0 2 0 1 48.572 48.637 2 0.0038591 13839 20230619_1881_Aki_TMTPro18x_K_F2 68.456 64.869 117660 97382 119770 118860 111800 119240 126080 112880 137290 114910 125260 108180 118540 102130 134410 130610 133410 121430 108820 89332 121350 118300 117090 120430 126640 115870 138660 115870 128720 110030 121970 107050 136310 130300 127580 115480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51489000 18449 4394 17423 34963 28010 28010 1 9606 Homo sapiens -0.050479674911684924 MEVAEPSSPTEEEEEEEEHSAEPRPR Acetyl (Protein N-term) 3051.2887 0.28873256 461 J3KQS6;A0A024R7L2;Q9NWV8;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;Q9NWV8-3;M0R3H9 BABAM1;HSPC142 BRISC and BRCA1-A complex member 1 yes no 1 0 1 1 0 1 43.577 43.577 3 4.4521E-26 11666 20230619_1880_Aki_TMTPro18x_K_F1 136.96 136.02 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18450 461 17424 34964 28011 28011 1 9606 Homo sapiens -0.15486025777636314 MEVDYSATVDQR Oxidation (M) 1428.6191 0.61910866 1088 A0A0S2Z489;O00232-2;O00232;A0A0S2Z476;J3KTJ5;J3KSK1 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 1 0 1.5 0.5 1 1 40.71 40.747 3 0.00096161 10135 20230619_1881_Aki_TMTPro18x_K_F2 85.672 75.205 177640 111700 143380 155040 182180 179740 150350 195810 217070 171150 234660 257070 222120 192020 172980 207350 285530 240980 163760 102730 149100 153330 185360 180250 155640 198150 217860 176910 239430 254840 224900 200990 183140 209920 271790 228690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76592000 18451 1088 17425 34965;34966 28012 28012 651 1 9606 Homo sapiens -0.07805613318214455 MEVISLQNEK Unmodified 1189.6013 0.60127375 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7;Q32P42;A8K3I2;A0A494C122;E7ESD9;A0A494BZX5;A0A494C0Y7 RAD50 DNA repair protein RAD50 yes no 0 0 0 5.5 0.5 1 1 53.343 53.418 3 0.023232 15332 20230619_1886_Aki_TMTPro18x_K_F6 60.102 43.077 47960 37913 40731 48055 47455 48113 50479 40054 68073 45545 46162 42357 47793 40617 51913 49871 48337 53574 44283 34798 42119 47681 48855 48479 51215 41670 67413 45708 48451 43108 48929 42458 52509 50179 46320 50826 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135130000 18452 4309 17426 34967;34968 28013 28013 1 9606 Homo sapiens 0.014057162175731719 MEVKPPPGRPQPDSGR Acetyl (Protein N-term);Oxidation (M) 1804.889 0.88901635 1469 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;B4E036 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 1 1 2 5 0.816 1 1 1 33.744 33.814 3 0.00080145 7384 20230619_1886_Aki_TMTPro18x_K_F6 56.937 45.675 41571 32608 34827 43797 39470 46250 45113 40954 47444 55809 61130 53901 57790 50175 55050 57419 56969 63335 38378 29949 36070 43319 40815 46451 45228 42618 48771 55543 61882 54698 58953 52275 56149 57910 54533 60070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 607380000 18453 1469 17427 34969;34970;34971 28014;28015;28016 28016 974 3 9606 Homo sapiens 0.018767400180195182 MEVKPPPGRPQPDSGR Acetyl (Protein N-term) 1788.8941 0.89410173 1469 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;B4E036 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 1 0 2 6 0.816 1 1 1 38.352 38.431 3 1.9341E-05 8781 20230619_1886_Aki_TMTPro18x_K_F6 51.466 38.048 94216 72535 86221 94424 92119 103610 100260 94820 112050 115320 132930 127200 128020 120380 118350 137110 136260 138570 87025 66602 88394 93662 95476 103860 100990 98049 114310 115830 135150 128410 130440 125230 121610 137550 130210 131590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 764430000 18454 1469 17427 34972;34973;34974 28017;28018 28018 2 9606 Homo sapiens 0.031210438806510865 MEVLAAETTSQQER Acetyl (Protein N-term) 1633.7618 0.76175015 174 A0A024R207;B2RCL4;A0A024R1Y6;O75781-2;O75781;B7Z649 PALM Paralemmin-1 yes no 1 0 0 1 0 1 59.898 59.898 2 1.1941999999999998E-46 18482 20230619_1880_Aki_TMTPro18x_K_F1 240.1 220.33 11950 7432.4 11658 13233 13206 11247 15924 12834 14114 11861 17525 13521 13479 12262 9925.2 14948 14805 15124 11031 6857.4 11898 12853 13632 11561 15836 12991 14594 12092 17610 13633 13724 12828 10453 14973 14120 14362 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145010000 18455 174 17428 34975 28019 28019 1 9606 Homo sapiens -0.029780256468256994 MEVMNLMEQPIK Acetyl (Protein N-term) 1503.7135 0.71354309 173 A0A0S2Z487;A0A024R1X8;P14923;A0A0S2Z495;C9JTX4;C9J826;C9JK18;C9JKY1;C9JPI2;K7ERP3 JUP Junction plakoglobin no no 1 0 0 4 0 1 66.324 66.337 2 0.00090922 20941 20230619_1883_Aki_TMTPro18x_K_F4 67.563 56.412 4084.5 3573 5114.5 4493.4 4208.1 4803.8 6090.6 4417.4 5927.5 5545.7 5517.6 5380.3 6319.4 4701 5222.3 7077.8 5132.8 5910.6 3786.4 3277.9 5094 4467.9 4489.1 4825.3 6023.4 4574.8 6030.6 5541 5714.6 5450.1 6367.1 4998.8 5335.6 7003.2 4917.3 5623.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5702700 18456 173 17429 34976 28020 28020 1 9606 Homo sapiens -0.01816514092070065 MEVSPLQPVNENMQVNK Acetyl (Protein N-term) 1997.955 0.955047 3433 P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2A DNA topoisomerase 2-alpha yes no 1 0 0 4 0 1 62.296 62.301 3 4.7348E-06 19314 20230619_1883_Aki_TMTPro18x_K_F4 75.383 55.806 21061 18131 22692 22736 15295 23503 24328 20399 25585 27518 24956 25055 27334 24337 23200 26816 27717 25208 19493 16634 22816 22593 16759 23622 24043 21259 25980 27359 25738 25513 27637 25255 23931 26811 26458 23969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51267000 18457 3433 17430 34977 28021 28021 1 9606 Homo sapiens -0.004012319220692007 MEVVEAAAAQLETLK Acetyl (Protein N-term) 1643.844 0.84402322 4362 Q96HR8;Q96HR8-2 NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1 yes no 1 0 0 5 0 1 70.101 70.144 2 0.0015714 22166 20230619_1885_Aki_TMTPro18x_K_F5 54.471 42.245 2797.5 1780.5 3796.1 2862.9 1493.9 2217.8 2978.2 1839.6 2834.2 3474.5 2760.5 1452.8 4200.4 3055.2 2570.8 3229.2 2253 3278.4 2590.8 1640.3 3733.5 2794.5 1774.4 2281.1 2913.3 1953.1 2896.7 3364.6 2888.6 1624.9 4158.9 3113.2 2629.3 3243 2165.8 3109.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2877000 18458 4362 17431 34978 28022 28022 1 9606 Homo sapiens 0.04785496432123182 MEVVVHGR Oxidation (M) 941.47529 0.47528537 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8 IFI16 Gamma-interferon-inducible protein 16 yes no 0 1 0 4.75 0.968 1 2 3 2 28.984 29.053 3 0.00089382 5379 20230619_1886_Aki_TMTPro18x_K_F6 117.4 89.874 69926 47728 67678 76782 100370 101230 96576 88356 118620 91244 94207 98580 104610 88286 90690 86055 102720 98072 64574 43956 69486 75411 101520 100190 98203 91239 118580 92360 98283 99350 105780 91312 93095 87218 98131 93039 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 89620000 18459 2829 17432 34979;34980;34981;34982;34983;34984;34985;34986 28023;28024;28025;28026;28027;28028;28029 28027 1688 7 9606 Homo sapiens 0.002206742228509029 MEVVVHGR Unmodified 925.48037 0.48037075 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8 IFI16 Gamma-interferon-inducible protein 16 yes no 0 0 0 5.5 0.5 1 1 35.64 35.716 3 0.00018374 7874 20230619_1886_Aki_TMTPro18x_K_F6 159.2 125.84 37401 27883 35485 38605 97618 108730 83400 87971 110400 75051 78122 75124 97802 70691 70155 94160 92170 81537 34550 25622 37193 38986 96148 104100 85643 90837 109590 76640 82479 76184 97829 74347 73166 93469 87902 77617 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197840000 18460 2829 17432 34987;34988 28030 28030 1 9606 Homo sapiens 0.014649780854597338 MFADLDYDIEEDK Acetyl (Protein N-term);Oxidation (M) 1660.6814 0.68143414 143 F6TII1;E7EX80;F6V3V1;F6VY12;F6V107;A0A024R1R7;Q53HE0;B3KM22;A0A024R1J5;Q9NRD5-2;Q9NRD5 PICK1 PRKCA-binding protein yes no 1 1 0 1 0 1 64.052 64.052 2 0.013243 20104 20230619_1880_Aki_TMTPro18x_K_F1 69.349 62.816 4491.2 3368 5082.4 7006.4 4316.7 5945 5569.9 6162.8 5072.3 8812.7 8407.5 7347.5 9777.2 7870.7 7548.1 7279.3 8388.3 11869 4155.2 3112.4 5115.6 6753.5 4583.1 6088.4 5534 6351.3 5344.7 8713.1 8520.3 7541.2 9823.6 8083.5 7760.3 7581 8041.8 11211 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6137600 18461 143 17433 34989 28031 28031 59 1 9606 Homo sapiens -0.12247931760566644 MFDVGGQR Oxidation (M) 924.41235 0.41235077 3415;3738;3385 P04899-4;P04899;Q96C71;P04899-2;B3KX51;P04899-6;P04899-3;P04899-5;B3KP24;Q6LCB5;P11488;A8MTJ3;Q5T697;A1LQ23;P19087;P08754;P63096;P63096-2;A0A3B3ITM0 GNAI2;WUGSC:H_LUCA15.1;GNAT1;GNAT3;GNAT2;GNAI3;GNAI1 Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-1 no no 0 1 0 4.5 0.5 1 1 38.885 38.952 2 0.008152 9009 20230619_1885_Aki_TMTPro18x_K_F5 98.009 77.45 73119 64265 72355 76903 79927 76088 80186 75981 92762 84212 101410 87734 100930 78104 85891 100110 95981 95230 67637 58928 73689 76628 82344 77048 81233 77877 94095 84793 103510 88668 102250 82076 88241 99936 91731 90505 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 240150000 18462 3385;3415;3738 17434 34990;34991 28032 28032 1995 1 9606 Homo sapiens -0.052878915651945135 MFDVGGQR Unmodified 908.41744 0.41743614 3415;3738;3385 P04899-4;P04899;Q96C71;P04899-2;B3KX51;P04899-6;P04899-3;P04899-5;B3KP24;Q6LCB5;P11488;A8MTJ3;Q5T697;A1LQ23;P19087;P08754;P63096;P63096-2;A0A3B3ITM0 GNAI2;WUGSC:H_LUCA15.1;GNAT1;GNAT3;GNAT2;GNAI3;GNAI1 Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-1 no no 0 0 0 6.5 0.5 1 1 45.831 45.918 2 0.027049 12108 20230619_1886_Aki_TMTPro18x_K_F6 82.716 68.181 382710 269710 361860 378580 443790 508980 451530 426650 541520 443060 490060 513450 521500 440650 466740 452550 565820 523680 353410 247940 370720 374920 455000 502720 457460 442010 544260 449320 506740 515440 528730 457660 480920 458660 540120 496800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 263260000 18463 3385;3415;3738 17434 34992;34993 28033 28033 1 9606 Homo sapiens -0.040435877025856826 MFDYTDDPEGPVMPGSHSVER Unmodified 2364.9991 0.99909666 133 A0A024R179;Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes no 0 0 0 3 0 1 53.589 53.641 3 8.0555E-30 15764 20230619_1882_Aki_TMTPro18x_K_F3 194.77 181.5 46830 41585 47289 52405 40665 61181 54530 51355 61998 59371 57087 58039 72718 49504 60333 65821 62432 66902 43329 38150 47957 52135 43267 60930 54404 53368 62554 59546 59490 58696 73046 52274 61714 65924 59745 63516 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57709000 18464 133 17435 34994 28034;28035 28034 2 9606 Homo sapiens -0.12880292286490658 MFEDLFE Unmodified 929.38407 0.38407033 3519 P29083 GTF2E1 General transcription factor IIE subunit 1 yes yes 0 0 0 2.5 1.12 1 1 1 1 66.569 66.583 2 0.05203 21444 20230619_1881_Aki_TMTPro18x_K_F2 85.306 78.92 11464 10593 16231 12034 31496 16355 17535 11396 14447 10514 13190 12733 14878 10135 12474 12886 13108 13140 10645 9707.2 16269 12099 30963 16152 18383 11981 14854 10752 13666 12745 14999 10696 12764 12918 12535 12477 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17351000 18465 3519 17436 34995;34996;34997;34998 28036 28036 1 9606 Homo sapiens -0.08344634265154127 MFEDPETTR Oxidation (M) 1140.4757 0.47573888 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;A0A7I2V3I2;H0YBP5;A0A7I2V4G3;E5RGA2;A0A161SXE1;A0A7I2V570;A0A7I2V429;H0YBR5;A0A7I2V3W9;A0A7I2V2Q9;A0A7I2V5K7 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 1 0 1.5 0.5 1 1 38.98 39.013 2 0.00081736 9581 20230619_1880_Aki_TMTPro18x_K_F1 119.21 107.26 93050 73765 81766 93746 109970 120440 117260 121820 127920 113260 123730 128060 140090 107550 107600 126090 141900 141700 85938 67706 84514 93371 112200 119780 118110 124080 129530 115380 127860 128650 140870 112670 111970 127230 135430 134420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 216400000 18466 1659 17437 34999;35000 28037;28038 28037 1076 2 9606 Homo sapiens -0.08887995638656321 MFEELGQR Unmodified 1008.4699 0.46986564 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 4 0 1 50.625 50.656 2 0.018551 14288 20230619_1883_Aki_TMTPro18x_K_F4 90.308 74.646 297750 262100 261700 278280 289560 396990 306170 295360 422930 322150 291830 334010 347090 256980 260840 328740 349400 327340 275180 240070 269470 281270 299940 389980 311200 309450 418870 324800 308170 335730 348280 271590 272000 328930 333300 311010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151200000 18467 769 17438 35001 28039 28039 1 9606 Homo sapiens -0.03403049359644683 MFEETAELLK Unmodified 1209.5951 0.59512574 4484 Q9C0F1 CEP44 Centrosomal protein of 44 kDa yes yes 0 0 0 3.5 0.5 1 1 62.622 62.64 3 0.0076228 19456 20230619_1883_Aki_TMTPro18x_K_F4 70.1 42.087 49508 40213 44542 60344 46040 52674 50306 55579 68007 61952 57704 63014 68069 55396 50946 75812 62959 70399 45738 36975 45779 59143 47876 53889 51029 56755 67880 62310 60156 63672 68328 58478 52911 75475 60174 66895 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118110000 18468 4484 17439 35002;35003 28040 28040 1 9606 Homo sapiens -0.0012880201393272728 MFEFQNFER Unmodified 1246.5441 0.54409322 1626 A0A6Q8PGS9;A0A6Q8PGA3;A0A6Q8PGV8;A0A6Q8PFJ4;O95140;A6NLD2;B7Z3H8;O95140-2 MFN2 Mitofusin-2 yes no 0 0 0 6 0 1 59.572 59.633 2 0.082851 17989 20230619_1886_Aki_TMTPro18x_K_F6 72.275 58.279 48769 36311 39790 43589 33660 41137 50177 46831 48978 55132 59367 64911 61464 55961 57588 63054 64380 71792 45001 33318 41109 43403 35929 41910 49599 47689 50389 55548 60559 65132 62505 58387 59035 63724 61584 68069 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22910000 18469 1626 17440 35004 28041 28041 1 9606 Homo sapiens -0.06931706268119342 MFESFIESVPLLK Unmodified 1538.8055 0.80545286 216 A0A0S2Z472;A8KAH7;A0A024R2W3;P13861-2;P13861;H7C1L0;H7C4A9 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 0 0 2 0 1 66.459 66.466 3 4.9492E-05 21398 20230619_1881_Aki_TMTPro18x_K_F2 112.13 92.547 6733.9 7661.6 7542.2 7923.5 6421.3 8731.2 9736.5 10057 8060.9 8224.2 10769 8993.8 9917.5 9777.9 9731.8 10149 9615.5 11577 6248 7010.5 7584.3 7997 6851 8796.1 9576.8 10131 8407.9 8431 10875 9135.2 10147 10076 9896.1 10272 9214.8 10974 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10515000 18470 216 17441 35005 28042 28042 1 9606 Homo sapiens 0.0576023558826364 MFGAGDEDDTDFLSPSGGAR Acetyl (Protein N-term) 2085.8586 0.85856366 4059 Q5T1M5;A0A8I5QJ94;Q5T1M5-2;A0A8I5KRH4;A0A8I5KV70;A0A8I5KRZ8;A0A8I5KQM8;Q5T1M5-3;A0A8I5KXH0 FKBP15 FK506-binding protein 15 yes no 1 0 0 1 0 1 64.563 64.563 2 2.7346E-11 20374 20230619_1880_Aki_TMTPro18x_K_F1 115.8 113.29 1001.5 1042.7 1799.8 1021.3 1433.1 2434.9 1735.4 1160.9 1266.6 2659.7 2047.6 3530.4 3808.4 2779.6 2732.8 3533.2 2576.4 3442.1 933.76 953.88 1753 1052.6 1528.8 2324.2 1718.2 1314.7 1356.7 2632.6 2151.3 3513.3 3775.8 2932.9 2793.8 3531 2472.6 3267.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7208800 18471 4059 17442 35006 28043 28043 1 9606 Homo sapiens -0.14093127948353867 MFGCLVAGR Acetyl (Protein N-term) 1051.4943 0.49430626 3995 Q53FT3;E9PJB2;E9PPG8 C11orf73 Protein Hikeshi yes no 1 0 0 1 0 1 63.286 63.286 2 0.020662 19816 20230619_1880_Aki_TMTPro18x_K_F1 45.081 39.422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18472 3995 17443 35007 28044 28044 1 9606 Homo sapiens -0.029381124777728473 MFGGPGTASR Oxidation (M) 995.44946 0.44946455 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;A0A1B0GVG8;A0A0S2Z4T0 VIM;HEL113 Vimentin yes no 0 1 0 4.8 2.79 1 1 1 1 1 35.171 35.205 2 0.0051138 7263 20230619_1887_Aki_TMTPro18x_K_F7 86.332 69.405 162280 103910 124160 119640 284670 371280 240520 213570 351950 158880 167860 163440 167180 138130 193230 179920 191250 139650 149560 95369 131810 122690 282560 352490 248070 227420 344340 164220 180880 164980 171960 145470 195820 177950 182650 133260 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 798050000 18473 3414 17444 35008;35009;35010;35011;35012 28045;28046;28047;28048 28047 2032 4 9606 Homo sapiens -0.04844220019435852 MFGGPGTASR Unmodified 979.45455 0.45454993 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;A0A1B0GVG8;A0A0S2Z4T0 VIM;HEL113 Vimentin yes no 0 0 0 3.5 2.69 1 1 1 1 41.472 41.506 2 1.5078E-06 10483 20230619_1881_Aki_TMTPro18x_K_F2 172.25 148.73 1012900 680040 779610 778960 1556800 2479100 1536500 1317100 2165300 1053600 1050600 1047000 1061300 886690 1136200 1208500 1220900 879070 933810 623980 824500 799660 1562800 2348600 1567000 1417700 2122400 1082400 1131000 1058400 1087000 936450 1159000 1190800 1165000 839690 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1191500000 18474 3414 17444 35013;35014;35015;35016 28049;28050;28051;28052 28050 4 9606 Homo sapiens -0.03599916156827021 MFGGPGTASRPSSSR Oxidation (M) 1509.6994 0.69942466 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;A0A1B0GVG8;A0A0S2Z4T0 VIM;HEL113 Vimentin yes no 0 1 1 5 1.41 1 1 1 1 1 31.614 31.684 3 0.0008827 6162 20230619_1885_Aki_TMTPro18x_K_F5 85.478 66.698 152780 118650 137760 114500 271840 284860 213050 214370 251620 106550 119900 95270 95945 82400 140620 107190 118420 80064 141110 108640 143070 118270 270140 273530 219210 220770 248500 113450 128100 96999 100860 86693 140790 105930 113250 76473 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1326400000 18475 3414 17445 35017;35018;35019;35020;35021 28053;28054;28055;28056 28054 2032 4 9606 Homo sapiens -0.035037072045042805 MFGGPGTASRPSSSR Unmodified 1493.7045 0.70451004 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;A0A1B0GVG8;A0A0S2Z4T0 VIM;HEL113 Vimentin yes no 0 0 1 6.5 0.5 1 1 35.925 35.991 3 5.1024E-14 7930 20230619_1886_Aki_TMTPro18x_K_F6 163.62 142.75 227250 201410 215090 156800 394520 494670 344110 333650 422640 151310 159260 105420 114390 94181 210880 179080 170070 84678 210140 184050 222000 166610 394850 470760 351890 346700 414780 161970 173670 109210 122870 101900 210290 173430 162530 81741 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1063799999.9999999 18476 3414 17445 35022;35023 28057;28058 28057 2 9606 Homo sapiens -0.022594033418727122 MFGIDRDAIAQAVR Oxidation (M) 1577.7984 0.79841043 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8;B4DVU1 HEL107;TKT Transketolase yes no 0 1 1 3.67 3.09 1 1 1 50.229 50.271 3 8.9616E-07 14442 20230619_1880_Aki_TMTPro18x_K_F1 135.14 116.31 132780 106910 114640 124640 134240 133010 132450 136350 168910 124820 131830 115760 123870 117840 130170 153510 135530 129060 122630 98041 118300 124550 137820 134000 134760 138740 168400 126590 136560 118150 127090 123290 132690 152260 129580 122860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 270530000 18477 3523 17446 35024;35025;35026 28059;28060 28059 2188 2 9606 Homo sapiens 0.032623157603666186 MFGIDRDAIAQAVR Unmodified 1561.8035 0.8034958 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8;B4DVU1 HEL107;TKT Transketolase yes no 0 0 1 1.5 0.5 1 1 54.746 54.758 3 5.8638999999999995E-22 16482 20230619_1881_Aki_TMTPro18x_K_F2 222.29 169.04 164210 137920 141740 148600 110380 141430 156400 158160 218910 154620 152990 150130 168370 142800 145970 209200 181840 178710 151700 126370 145450 149200 118680 143940 156930 160340 216620 156460 160700 152520 170370 151010 151160 207260 173610 170080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1047999999.9999999 18478 3523 17446 35027;35028 28061;28062 28062 2 9606 Homo sapiens 0.04506619622998187 MFGIPVVVAVNAFK Unmodified 1490.8319 0.83194239 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 7.5 0.5 1 1 65.722 65.744 3 1.0075E-11 20387 20230619_1887_Aki_TMTPro18x_K_F7 176.95 160.6 114780 104480 115350 100770 87193 116170 116280 111580 121990 110370 105000 88900 105610 79588 122450 106470 110800 95660 106210 95610 116640 102390 93718 116210 115760 114260 123250 110970 108510 90974 108490 83882 123480 106010 106020 91028 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 380820000 18479 2973 17447 35029;35030 28063 28063 1 9606 Homo sapiens 0.1061596927024766 MFGMVLEK Unmodified 953.47145 0.47144555 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DS32 CSE1L Exportin-2 yes no 0 0 0 1.5 0.5 1 1 61.807 61.812 3 0.0094987 19411 20230619_1881_Aki_TMTPro18x_K_F2 67.981 26.952 118670 104260 117360 114050 95413 115940 111840 116810 118670 119280 126780 113060 136970 115600 140470 143520 98480 101680 109770 95522 118980 114470 101360 117130 112120 119340 120840 120230 130090 115260 139560 120570 140490 141460 94653 97010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47119000 18480 1462 17448 35031;35032 28064 28064 1 9606 Homo sapiens -0.007151315952455661 MFIGGLSWDTSK Unmodified 1340.6435 0.64347291 756;3227 A0A087WUK2;A0A024RDB5;O14979;B4DTA2;O14979-2;O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 2.5 0.5 1 1 63.033 63.053 3 4.5807E-05 19703 20230619_1882_Aki_TMTPro18x_K_F3 118.28 97.615 275740 196170 256450 292380 178230 318140 302690 286700 331090 270490 237590 290860 350000 282920 249150 388240 365380 370330 254610 180460 261350 287530 195650 318570 298790 294750 331860 275030 253410 294170 348940 297710 262300 387000 348500 351910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 368140000 18481 756;3227 17450 35033;35034 28065;28066 28066 2 9606 Homo sapiens -0.013223083740285801 MFIGGLSWDTSK Oxidation (M) 1356.6384 0.63838754 756;3227 A0A087WUK2;A0A024RDB5;O14979;B4DTA2;O14979-2;O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like no no 0 1 0 2 0 1 61.076 61.087 3 8.5881E-08 19058 20230619_1881_Aki_TMTPro18x_K_F2 136.5 116.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18482 756;3227 17450 35035 28067 28067 460 1 9606 Homo sapiens -0.025666122366601485 MFIGGLSWDTSKK Unmodified 1468.7384 0.73843593 756;3227 A0A087WUK2;A0A024RDB5;O14979;B4DTA2;O14979-2;O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 1 5 0 1 60.39 60.442 3 2.584E-05 18084 20230619_1885_Aki_TMTPro18x_K_F5 117.92 92.596 140380 150960 168610 158060 148190 210540 185530 184010 183860 124280 99481 65462 75342 56001 141960 49094 57840 33852 130280 138170 168640 159810 156780 208220 184840 188160 183870 127110 104910 68824 80708 57788 138020 48923 55988 32402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149080000 18483 756;3227 17451 35036 28068 28068 1 9606 Homo sapiens 0.022816250971345653 MFIGGLSWDTTK Oxidation (M) 1370.654 0.6540376 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;D6RAF8;D6RF44;D6RD83;D6RBQ9 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 1 0 2 0.816 1 1 1 61.475 61.488 3 1.0096E-05 19167 20230619_1881_Aki_TMTPro18x_K_F2 131.83 102.49 1100800 825610 897470 1108100 996990 1254200 988890 1054100 1402400 982990 1013600 1085500 1213300 1033500 1067100 1618100 1254000 1603500 1015800 758410 931450 1097200 1030100 1252000 1010200 1088900 1388800 1001600 1067400 1097000 1225500 1098700 1101200 1613800 1200400 1521800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1693499999.9999998 18484 759 17452 35037;35038;35039 28069;28070 28069 463 2 9606 Homo sapiens -0.016463257196164705 MFIGGLSWDTTK Unmodified 1354.6591 0.65912298 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;D6RAF8;D6RF44;D6RD83;D6RBQ9 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 3 0.816 1 1 1 63.104 63.119 3 5.6048E-10 20009 20230619_1881_Aki_TMTPro18x_K_F2 147.91 89.232 402010 306370 372720 377690 261770 412040 345790 346710 439150 424840 368390 437660 480050 412390 408390 496310 515300 600140 371340 281160 379530 376010 284150 412260 346810 360870 439470 425720 386650 442670 483190 430860 422930 502880 492590 568600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1770499999.9999998 18485 759 17452 35040;35041;35042 28071 28071 1 9606 Homo sapiens -0.004020218569849021 MFIGGLSWDTTKK Oxidation (M) 1498.749 0.74900062 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;D6RAF8;D6RF44;D6RD83;D6RBQ9 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 1 1 3.5 0.5 1 1 56.563 56.584 3 0.001907 17000 20230619_1882_Aki_TMTPro18x_K_F3 99.941 85.256 337630 319360 352030 338670 445400 388100 389190 391180 336070 285390 286690 174490 173460 138000 347370 127160 130340 80474 312620 292450 357580 341320 452670 389160 394120 396500 343360 290680 291130 181120 188570 143050 336970 126140 126460 77112 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 398220000 18486 759 17453 35043;35044 28072;28073 28072 463 2 9606 Homo sapiens 0.019576077515694124 MFIGGLSWDTTKK Unmodified 1482.7541 0.754086 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;D6RAF8;D6RF44;D6RD83;D6RBQ9 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 1 4.5 0.5 1 1 60.691 60.717 3 1.4295E-06 18616 20230619_1883_Aki_TMTPro18x_K_F4 141.13 128.96 945220 916370 1009300 872280 797840 1201000 1099100 1100300 901670 802970 752540 458730 389760 282660 1017100 258830 293740 131670 875520 838320 1016500 889820 855160 1186800 1085000 1122600 923170 816740 762600 475530 437950 296460 979120 256020 286920 127000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 865310000 18487 759 17453 35045;35046 28074;28075 28074 2 9606 Homo sapiens 0.03201911614178243 MFILQSK Unmodified 865.47316 0.47316011 3289 O60925;E5RGS4 PFDN1 Prefoldin subunit 1 yes no 0 0 0 4 0.816 1 1 1 57.345 57.377 2 0.012714 17222 20230619_1883_Aki_TMTPro18x_K_F4 119.21 37.253 223930 193970 196230 197810 195960 262160 221740 221690 273310 154640 143690 117160 141370 109870 190430 158210 153250 112920 206930 177620 201710 200390 204770 259220 223600 227440 269980 159000 153370 120590 146660 116140 190530 155790 146710 107880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130180000 18488 3289 17454 35047;35048;35049 28076 28076 1 9606 Homo sapiens 0.03504245485021329 MFILSDGEGK Oxidation (M) 1111.522 0.52196079 1932 P35244;A4D105;B5MC59 RPA3 Replication protein A 14 kDa subunit yes no 0 1 0 5 0 1 52.186 52.26 3 0.012731 14765 20230619_1885_Aki_TMTPro18x_K_F5 64.374 37.07 40630 35345 42354 42750 39553 45599 44971 37122 51298 45458 48190 53258 49932 45603 54273 53880 52287 61563 37597 32415 42844 42602 41465 45704 45217 38771 51763 45757 49719 53441 51133 47724 55004 54442 50111 58357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32564000 18489 1932 17455 35050 28077 28077 1236 1 9606 Homo sapiens -0.02933930736548973 MFKPQALLDK Unmodified 1189.6529 0.65291539 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8;G3V3J0 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 1 3.5 0.5 1 1 56.541 56.562 3 0.00040155 16848 20230619_1883_Aki_TMTPro18x_K_F4 113.22 63.295 321540 277800 314290 319050 312600 447400 383070 353710 434350 176030 140180 77572 119120 85159 240850 148580 137590 74003 297360 254650 320050 320500 327570 440220 383450 363080 427020 185020 156610 83875 127980 91000 236540 144430 132200 71311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187770000 18490 385 17456 35051;35052 28078 28078 1 9606 Homo sapiens 0.06567504702138649 MFLGDAVDVFETR Unmodified 1498.7126 0.71261511 1805 A0A8Q3WLQ2;B4E0K0;Q5JRG1;H7BYF2;A0A8Q3WKK3;A0A8Q3WKL7;A0A8Q3WKK5;B3KW23;A0A8Q3WKQ7;Q9BVL2-2;Q9BVL2-3;Q9BVL2 NUPL1 Nucleoporin p58/p45 yes no 0 0 0 4.5 0.5 1 1 64.028 64.055 3 0.021678 19785 20230619_1885_Aki_TMTPro18x_K_F5 57.328 37.669 11248 11245 11252 8694.2 10586 12803 11779 13113 15341 16004 14976 16823 19142 16239 16896 17992 15923 17425 10415 10272 11406 9064.1 11095 12650 11923 13440 15424 16044 15577 17015 19294 16862 17173 18020 15254 16551 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24297000 18491 1805 17457 35053;35054 28079 28079 1 9606 Homo sapiens -0.016792691451655628 MFLQYYLNEQGDR Oxidation (M) 1691.7614 0.76135622 1851 A0A8V8TQT0;A0A8V8TQE5;Q9NPE3;H0YM60;A0A8V8TP28;A0A8V8TPD4 NOP10 H/ACA ribonucleoprotein complex subunit 3 yes no 0 1 0 7 0 1 60.455 60.498 3 3.9933E-08 17994 20230619_1887_Aki_TMTPro18x_K_F7 157.03 129.62 40532 36558 41495 45060 41916 48161 46775 41823 50854 45293 46353 50283 55426 46051 45244 56303 50774 55980 37511 33529 42104 44842 43645 48319 47000 43284 51396 45761 48191 50682 55794 48187 46555 56364 48563 53155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45712000 18492 1851 17458 35055 28080 28080 1180 1 9606 Homo sapiens -0.05685400576021493 MFLSFPTTK Oxidation (M) 1086.542 0.54196796 2774 CON__P01966;G3V1N2;I1VZV6;A0A385HW21;A0A385HW02;A0A385HVZ2;A0A385HVY8;A0A385HW63;A0A2R8Y7C0;E9M4D4;Q4ZGM8;U6A216;A0A1K0GXZ1;Q96T46;A0A1S5UZ39;P69905;D1MGQ2;A0A0K2BMD8;U3PXP0;A0A385HW00;Q9BX83 HBA2;HBA1 Hemoglobin subunit alpha yes no 0 1 0 4.14 0.833 2 2 3 58.588 58.621 2;3 0.0012464 17638 20230619_1883_Aki_TMTPro18x_K_F4 113.94 91.113 + 161930 189510 203120 189810 327530 359260 290650 304990 344680 631270 1061400 1559900 296540 622820 592120 541930 576100 862690 150450 173350 204760 193980 329290 349320 297320 324230 376190 647290 1025200 1506600 343040 666760 595990 564240 553340 814940 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 2057899999.9999998 18493 2774 17459 35056;35057;35058;35059;35060;35061;35062 28081;28082;28083;28084 28082 1654 4 9606 Homo sapiens 0.0021586499406112125 MFLSFPTTK Acetyl (Protein N-term);Oxidation (M) 1128.5525 0.55253264 2774 CON__P01966;G3V1N2;I1VZV6;A0A385HW21;A0A385HW02;A0A385HVZ2;A0A385HVY8;A0A385HW63;A0A2R8Y7C0;E9M4D4;Q4ZGM8;U6A216;A0A1K0GXZ1;Q96T46;A0A1S5UZ39;P69905;D1MGQ2;A0A0K2BMD8;U3PXP0;A0A385HW00;Q9BX83 HBA2;HBA1 Hemoglobin subunit alpha yes no 1 1 0 3.5 0.5 1 1 67.381 67.408 2 0.0019882 21496 20230619_1882_Aki_TMTPro18x_K_F3 49.418 44.052 + 6041 4733 4985 3335.6 4827.4 5710 5827.8 7514.5 7983.4 7380.4 11842 11630 10506 6472.3 16040 5922.6 12352 10354 5576.3 4324.4 5140.3 3527.2 5063 5638.4 5891.5 7539.2 8152.1 7588.5 11919 11434 11004 6832.2 15952 6240.8 11840 9794.5 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2927300 18494 2774 17459 35063;35064 28085 28085 1654 1 9606 Homo sapiens -0.0066015235152008245 MFLSFPTTK Unmodified 1070.5471 0.54705333 2774 CON__P01966;G3V1N2;I1VZV6;A0A385HW21;A0A385HW02;A0A385HVZ2;A0A385HVY8;A0A385HW63;A0A2R8Y7C0;E9M4D4;Q4ZGM8;U6A216;A0A1K0GXZ1;Q96T46;A0A1S5UZ39;P69905;D1MGQ2;A0A0K2BMD8;U3PXP0;A0A385HW00;Q9BX83 HBA2;HBA1 Hemoglobin subunit alpha yes no 0 0 0 5 0.816 1 1 1 62.093 62.128 3 0.00075655 18859 20230619_1885_Aki_TMTPro18x_K_F5 104.2 87.175 + 147610 188480 228410 201040 307670 384800 281860 290080 420340 1113900 1677400 2537200 960750 1138200 1526000 922230 1102700 1548700 137590 172450 226440 204440 313000 373120 290850 325290 471250 1122400 1636900 2458100 1031000 1206700 1515400 967590 1062200 1462700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 993990000 18495 2774 17459 35065;35066;35067 28086;28087;28088 28087 3 9606 Homo sapiens 0.014601688566699522 MFLVGLTGGIASGK Oxidation (M) 1365.7326 0.73262227 4281 Q8WVC6;K7ESP4;A0A8I5KT67;A0A8J9G8Q5;Q8WVC6-2 DCAKD Dephospho-CoA kinase domain-containing protein yes no 0 1 0 5 0 1 61.992 62.04 3 0.0083226 18845 20230619_1885_Aki_TMTPro18x_K_F5 65.043 44.209 50675 38961 45287 54439 48465 59534 59540 53080 63709 53756 56250 57141 54477 47032 61285 57885 57684 59452 46799 35802 46571 53742 50441 59636 59492 54720 64334 54416 58017 57515 55983 49420 61983 58096 55239 56445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63396000 18496 4281 17460 35068 28089 28089 2715 1 9606 Homo sapiens 0.06438526585498039 MFLVGLTGGIASGK Unmodified 1349.7377 0.73770765 4281 Q8WVC6;K7ESP4;A0A8I5KT67;A0A8J9G8Q5;Q8WVC6-2 DCAKD Dephospho-CoA kinase domain-containing protein yes no 0 0 0 6 0 1 63.535 63.584 3 7.8409E-07 19752 20230619_1886_Aki_TMTPro18x_K_F6 129.71 108.84 75974 62672 73706 76563 62460 68004 94085 83177 81702 80208 81400 99846 85697 79566 91702 89200 95667 118210 70237 57493 74928 76099 66552 69772 92629 83902 83912 81781 83892 99719 87664 83258 93354 91108 91651 111890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46949000 18497 4281 17460 35069 28090 28090 1 9606 Homo sapiens 0.07682830448129607 MFLVNSFLK Acetyl (Protein N-term);Oxidation (M) 1155.5998 0.59981719 1009 A0A0C4DGQ5;P04632;K7EM73;K7EKD8;K7ELJ7;K7EMQ1;K7ES78 CAPNS1 Calpain small subunit 1 yes no 1 1 0 2.5 0.5 1 1 66.493 66.514 2 0.0016997 21157 20230619_1882_Aki_TMTPro18x_K_F3 76.899 61.46 9712.8 9391.6 6417.3 7109 14677 14437 10075 11287 16123 4466.3 5443 3578.5 4308.8 3654.3 5793.3 3483.8 3969.7 6508.1 8966.1 8578.1 6919 7470 14476 13982 10599 11555 15622 4879 6025.8 3687.2 4507.2 3765.2 5752.5 3678.9 3833.4 6140.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5454000 18498 1009 17461 35070;35071 28091 28091 573 1 9606 Homo sapiens 0.028241269194722918 MFLVNSFLK Acetyl (Protein N-term) 1139.6049 0.60490256 1009 A0A0C4DGQ5;P04632;K7EM73;K7EKD8;K7ELJ7;K7EMQ1;K7ES78 CAPNS1 Calpain small subunit 1 yes no 1 0 0 4.5 0.5 1 1 69.404 69.433 2 0.0011515 21908 20230619_1885_Aki_TMTPro18x_K_F5 77.058 61.976 9719.4 7643.4 5945.5 5940.2 9808.1 13420 9656.3 8771.8 13693 0 1488.8 1936.6 2087.1 1109.2 2422.8 2564.1 2881.5 2139.7 8956.2 6987.6 6416.2 6241.2 9916.3 12892 9851.9 9046.6 13186 0 2132.2 1862.3 2130.3 1248.6 2483.4 2528.6 2747.4 2039.5 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 4387500 18499 1009 17461 35072;35073 28092 28092 1 9606 Homo sapiens 0.0406843078210386 MFLYADNEDR Oxidation (M) 1288.5394 0.53940177 851 A0A087WY55;Q9NP79;Q9C063;Q5TGM0;Q9NP79-2 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes no 0 1 0 2.5 0.5 1 1 46.777 46.855 2 0.00050985 12975 20230619_1881_Aki_TMTPro18x_K_F2 119.07 90.669 84536 69920 74986 85292 92195 94259 93320 96103 104300 95810 106340 116780 102730 91379 98159 114900 114130 126180 78100 64140 77283 84992 94401 94699 94371 98043 105690 97473 108920 116740 104790 96324 100880 115660 109130 119680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99425000 18500 851 17462 35074;35075 28093;28094 28093 501 2 9606 Homo sapiens -0.09332635201553785 MFLYADNEDR Unmodified 1272.5445 0.54448715 851 A0A087WY55;Q9NP79;Q9C063;Q5TGM0;Q9NP79-2 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes no 0 0 0 3 0.816 1 1 1 53.622 53.659 2 2.4856E-05 15796 20230619_1882_Aki_TMTPro18x_K_F3 157.96 118.25 257760 236970 255340 281820 268580 302580 310970 291620 324830 317920 319570 319530 312110 289780 297790 333920 350890 327220 238510 217250 259980 281210 279070 304170 311480 299450 329950 319970 327840 323300 318330 302120 306180 334410 335050 310960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147390000 18501 851 17462 35076;35077;35078 28095;28096;28097 28096 3 9606 Homo sapiens -0.08088331338922217 MFPYEASTPTGISASCR Unmodified 1873.8339 0.83386923 4643 Q9P1N8 yes yes 0 0 0 1 0 1 55.098 55.098 3 4.0246E-09 16479 20230619_1880_Aki_TMTPro18x_K_F1 124.43 96.107 24248 19537 26156 27088 22963 30483 29588 25246 26183 33412 28657 28143 35166 25699 31253 33743 32829 37487 22434 17948 26378 26770 24302 30430 29344 26383 27011 33160 29574 28723 35468 27050 31950 33977 31428 35549 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30273000 18502 4643 17463 35079 28098 28098 1 9606 Homo sapiens -0.06809434564775074 MFQAAGAAQATPSHDAK Acetyl (Protein N-term) 1742.8046 0.80461802 1187 J3KRR0;J3QQM5;A0A140VJN0;Q9BT23 LIMD2 LIM domain-containing protein 2 yes no 1 0 0 4.5 0.5 2 2 47.12 47.18 2;3 3.8163E-13 12573 20230619_1885_Aki_TMTPro18x_K_F5 96.666 85.386 96836 86713 92387 90189 84210 102460 101380 106610 112790 112700 119330 103330 122610 105480 109560 121930 126400 111460 89561 79406 94098 91028 88666 102780 101620 108750 114520 113290 122160 105480 124430 109600 112630 121660 120670 106030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 119230000 18503 1187 17464 35080;35081;35082;35083 28099;28100 28100 2 9606 Homo sapiens -0.03707210798734195 MFQDIGVSK Unmodified 1023.5059 0.5059168 898 A0A590UJ56;A0A590UJR3;A0A590UJ50;A0A090N7U0;Q13616;A0A590UJ21;B3KTW0;A0A590UJC4;B4DLA3;A0A590UK34;Q75MQ1;B3KU45 CUL1 Cullin-1 yes no 0 0 0 8 0 1 55.726 55.788 3 0.003926 16078 20230619_1888_Aki_TMTPro18x_K_F8 78.098 55.568 63497 51681 61940 64138 49242 62626 61301 58503 52119 71411 63555 66076 82780 61203 66318 93768 87853 76808 58700 47419 62879 63733 52512 63335 60867 60418 54187 71278 65532 67196 83053 65038 69061 92668 83773 73173 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46317000 18504 898 17465 35084 28101 28101 1 9606 Homo sapiens -0.004895921827824168 MFQQCLELPSQSR Unmodified 1622.7545 0.7544967 4706 Q9Y2A7;Q9Y2A7-2;A0A994J4I5;A0A994J6K9 NCKAP1 Nck-associated protein 1 yes no 0 0 0 1 0 1 55.574 55.574 3 6.0567E-06 16675 20230619_1880_Aki_TMTPro18x_K_F1 121.86 108.63 34351 30922 38153 35670 31156 35495 39419 37586 39929 40750 42080 41574 45668 39448 39784 46580 44650 42548 31812 28342 38324 35652 33126 35960 39297 38347 40742 41036 43227 42108 46221 41130 40864 46453 42659 40463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64708000 18505 4706 17466 35085 28102 28102 1 9606 Homo sapiens -0.03197036728261082 MFSEADACELWIDEK Unmodified 1842.7804 0.78043668 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 2 0 1 63.228 63.236 3 0.00017794 20070 20230619_1881_Aki_TMTPro18x_K_F2 103.76 93.127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18506 2337;3778;3779 17467 35086 28103 28103 1 9606 Homo sapiens -0.10724232067286721 MFSHQVQK Unmodified 1003.4909 0.49093544 4736 Q9Y4C2-2;Q9Y4C2;B4DST7;B7Z246 TCAF1 TRPM8 channel-associated factor 1 yes no 0 0 0 2 0 1 39.377 39.447 3 0.00084769 9551 20230619_1881_Aki_TMTPro18x_K_F2 101.64 80.343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18507 4736 17468 35087 28104 28104 1 9606 Homo sapiens -0.010670392601127787 MFSSSAK Acetyl (Protein N-term);Oxidation (M) 814.3531 0.35310455 3703 P62081;B5MCP9;A0A2R8Y623 RPS7 40S ribosomal protein S7 yes no 1 1 0 3.5 0.5 1 1 41.355 41.406 2 0.0090984 10114 20230619_1883_Aki_TMTPro18x_K_F4 83.614 66.229 178310 139890 183920 184230 231830 241460 223960 238090 261270 111790 137360 125540 124120 109490 181460 110010 156350 113280 164880 128450 187080 183160 236700 239710 227360 240020 258610 120410 146250 126420 129900 113480 181710 110980 149540 107710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292220000 18508 3703 17469 35088;35089 28105 28105 2390 1 9606 Homo sapiens -0.06149787579386157 MFSSSAK Acetyl (Protein N-term) 798.35819 0.35818993 3703 P62081;B5MCP9;A0A2R8Y623 RPS7 40S ribosomal protein S7 yes no 1 0 0 5.5 0.5 1 1 50.525 50.601 2 0.0050847 14121 20230619_1886_Aki_TMTPro18x_K_F6 83.614 73.2 237380 200370 214770 210920 226990 289450 253410 241400 328080 149350 153050 137890 151340 114480 193770 168020 157080 136630 219370 183540 220270 213260 236000 285570 256120 247470 322420 155910 165200 139920 156500 121720 194120 166320 150510 130180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 282610000 18509 3703 17469 35090;35091 28106;28107 28107 2 9606 Homo sapiens -0.04905483716777326 MFSWVSK Acetyl (Protein N-term) 925.43677 0.4367746 2224 Q9H4M9;B2R5U3;B4DMV9;B4DR44;B4DTR4;C9JIJ3;C9IZH1 EHD1 EH domain-containing protein 1 yes no 1 0 0 1.5 0.5 1 1 65.447 65.45 2 0.003219 20979 20230619_1881_Aki_TMTPro18x_K_F2 84.244 49.144 35119 32853 35801 30181 26586 36340 37256 38047 33620 46214 39865 37575 45202 40126 40806 51175 45509 47771 32508 30050 36150 30826 28666 36325 36859 38948 34769 45981 40834 38641 45769 41891 41890 51026 43513 45401 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41398000 18510 2224 17470 35092;35093 28108 28108 1 9606 Homo sapiens -0.02892631411691582 MFSWVSK Acetyl (Protein N-term);Oxidation (M) 941.43169 0.43168922 2224 Q9H4M9;B2R5U3;B4DMV9;B4DR44;B4DTR4;C9JIJ3;C9IZH1 EHD1 EH domain-containing protein 1 yes no 1 1 0 8 0 1 61.892 61.92 2 0.0052876 18575 20230619_1888_Aki_TMTPro18x_K_F8 53.17 31.022 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18511 2224 17470 35094 28109 28109 1385 1 9606 Homo sapiens -0.04136935274300413 MFTQQQPQELAR Unmodified 1475.7191 0.71909747 1186 B3KY04;A0A140VJM4;Q96CX2 KCTD12 BTB/POZ domain-containing protein KCTD12 yes no 0 0 0 6.5 0.5 1 1 47.02 47.108 2 2.9585E-09 12250 20230619_1887_Aki_TMTPro18x_K_F7 209.8 187.06 88056 73437 82528 75656 85969 121670 129290 132250 141520 121860 136740 140610 116960 123710 143450 150680 150970 138450 81390 67260 84383 76904 90395 119720 128180 134010 143150 124290 139740 141380 121450 129440 145860 150300 144290 131670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116190000 18512 1186 17471 35095;35096 28110;28111 28111 2 9606 Homo sapiens 0.0002666880625383783 MFVEEVSTGQECGVVLDK Oxidation (M) 2041.9336 0.93364286 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 1 0 4 0 1 58.49 58.493 3 0.01115 17683 20230619_1883_Aki_TMTPro18x_K_F4 55.189 43.919 25355 19886 19576 23233 20893 21048 27919 23490 26130 31585 28103 33025 31351 30756 35222 33552 30092 37855 23395 18238 20411 23164 21773 21518 27674 24061 26832 31520 28936 33358 32098 31938 35458 33920 28895 35881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125020000 18513 1637 17472 35097 28112 28112 1064 1 9606 Homo sapiens -0.04564661741483178 MFVGGLSWDTSK Oxidation (M) 1342.6227 0.62273747 4406 Q99729-3;D6R9P3;D6RD18;B4DMY3;D6RBZ0;Q53F64;Q99729-2;Q99729-4;Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 1 0 1 0 1 58.897 58.897 3 0.00015381 18020 20230619_1880_Aki_TMTPro18x_K_F1 97.911 83.948 75474 70619 69907 87362 73138 77811 84953 87723 90374 84354 88541 88764 104140 87986 85024 112690 103180 112550 69808 64763 71633 86719 76011 79647 85148 88861 91690 85569 91607 89958 104900 92097 87952 112750 98611 106870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147270000 18514 4406 17473 35098 28113 28113 2767 1 9606 Homo sapiens -0.03486898753726564 MFVGGLSWDTSKK Oxidation (M) 1470.7177 0.71770049 4406 Q99729-3;D6R9P3;D6RD18;B4DMY3;D6RBZ0;Q53F64;Q99729-2;Q99729-4;Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 1 1 3 0 1 54.3 54.346 3 0.025313 16034 20230619_1882_Aki_TMTPro18x_K_F3 79.875 65.632 153000 161000 189480 174660 231010 197590 211000 203470 172340 144200 146960 90974 89820 67604 208760 63148 64508 42839 142000 147410 189920 175700 235430 198400 212750 205850 176700 147250 149360 94070 98908 70330 201420 62900 62965 40984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95589000 18515 4406 17474 35099 28114 28114 2767 1 9606 Homo sapiens 0.0011703471745931893 MFVGGLSWDTSKK Unmodified 1454.7228 0.72278587 4406 Q99729-3;D6R9P3;D6RD18;B4DMY3;D6RBZ0;Q53F64;Q99729-2;Q99729-4;Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 1 4 0 1 58.504 58.506 4 4.2905E-09 17738 20230619_1883_Aki_TMTPro18x_K_F4 169.23 139.02 113410 108240 138830 115070 94210 108450 125360 123930 100920 94795 83885 61889 66216 46793 128820 53612 51976 34793 105170 99115 138100 115700 102100 110560 123930 124770 103500 96307 86102 63832 70967 49172 125230 52976 50354 33309 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80094000 18516 4406 17474 35100 28115 28115 1 9606 Homo sapiens 0.013613385800908873 MFVGQVPR Oxidation (M) 948.48512 0.48512178 3017 Q92879-3;Q92879-2;Q92879-5;G5EA30;Q92879;Q92879-4;Q92879-6;E9PSH0;E9PKU1;E9PQK4;F5H4Y5;F5H0D8;E9PKA1 CELF1 CUGBP Elav-like family member 1 yes no 0 1 0 1.5 0.5 1 1 42.308 42.347 2 0.025611 10812 20230619_1881_Aki_TMTPro18x_K_F2 76.847 40.651 46296 42431 44173 47409 51896 56245 55235 58990 64131 54137 55056 49843 57753 44718 55139 61117 65722 51680 42824 38877 45188 47603 53387 56277 55772 59918 64449 54852 57003 50666 58721 47174 56726 60611 62683 49237 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91527000 18517 3017 17475 35101;35102 28116 28116 1779 1 9606 Homo sapiens 0.008818622282092292 MFVGQVPR Unmodified 932.49021 0.49020716 3017 Q92879-3;Q92879-2;Q92879-5;G5EA30;Q92879;Q92879-4;Q92879-6;E9PSH0;E9PKU1;E9PQK4;F5H4Y5;F5H0D8;E9PKA1 CELF1 CUGBP Elav-like family member 1 yes no 0 0 0 3 0 1 47.968 48.047 2 0.062974 13262 20230619_1882_Aki_TMTPro18x_K_F3 78.616 25.445 162800 150620 178790 173340 159480 272690 298680 180960 228110 199320 195350 171470 208900 169630 194760 213640 203770 188480 150780 138040 180230 174460 171350 265860 290500 191970 234910 199800 202500 175400 212070 177400 198890 212530 194780 179350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188880000 18518 3017 17475 35103 28117 28117 1 9606 Homo sapiens 0.02126166090829429 MFVLDEADEMLSR Unmodified 1554.7058 0.70581517 2105;3883 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;B4DNH2;J3KTB5;J3KSZ0;J3QL43;J3QR64;B4DKP9;J3KTN0;J3QLN6;Q14240;Q14240-2;E7EQG2;Q9NZE6;B4DJX6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 0 2.17 1.07 2 2 1 1 64.08 64.089 2;3 1.0359E-36 20160 20230619_1882_Aki_TMTPro18x_K_F3 243.11 223.43 99111 82128 99768 98871 80300 105310 100450 97771 107810 120860 112340 109370 135030 111160 114140 143670 134290 139340 91657 75328 101010 98579 85614 105800 100380 101030 109690 120560 116020 111670 136090 116360 117710 143520 128330 132370 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 585940000 18519 2105;3883 17476 35104;35105;35106;35107;35108;35109 28118;28119;28120 28119 3 9606 Homo sapiens -0.04934950087999823 MFVLDEADEMLSR Oxidation (M) 1570.7007 0.7007298 2105;3883 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;B4DNH2;J3KTB5;J3KSZ0;J3QL43;J3QR64;B4DKP9;J3KTN0;J3QLN6;Q14240;Q14240-2;E7EQG2;Q9NZE6;B4DJX6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 1 0 2.67 0.471 1 2 62.408 62.438 2;3 1.8021E-15 19421 20230619_1882_Aki_TMTPro18x_K_F3 209.97 191.8 69715 57235 71012 79591 66899 78147 70923 74111 83335 75678 84909 82963 94101 72402 80495 100330 88761 95756 64475 52578 72018 78495 69967 79014 71699 76051 84241 76634 87423 83601 95054 76535 82661 100060 84894 90973 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112270000 18520 2105;3883 17476 35110;35111;35112 28121;28122;28123 28122 1327;1328 3 9606 Homo sapiens -0.061792539506313915 MGAGLGHGMDR 2 Oxidation (M) 1132.4754 0.47536173 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R2T0 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 2 0 4.88 1.05 1 2 2 3 27.014 27.07 3 0.00011397 4555 20230619_1885_Aki_TMTPro18x_K_F5 115 97.492 90450 71713 85629 98507 111880 113930 109670 104660 125880 111680 119190 117560 119000 97595 100230 120480 131920 124010 83583 65878 87854 97440 114020 113830 111170 107770 127030 112700 122570 118420 120580 102560 104100 120840 125860 117770 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 278800000 18521 3194;3631 17477 35113;35114;35115;35116;35117;35118;35119;35120 28124;28125;28126;28127;28128;28129;28130 28126 1860;1861 7 9606 Homo sapiens -0.08557693839475178 MGAGLGHGMDR Oxidation (M) 1116.4804 0.48044711 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R2T0 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 1 0 5.67 0.816 1 2 5 1 30.615 30.678 3 0.00012127 5772 20230619_1885_Aki_TMTPro18x_K_F5 114.86 105.81 99679 111310 105510 103950 149330 152590 113500 130250 147450 110920 156320 146760 123720 114790 133890 119930 165010 129680 92425 101780 107320 106300 150630 150200 117630 134010 148480 114290 158480 146340 127880 119670 137590 121050 157330 123200 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 414490000 18522 3194;3631 17477 35121;35122;35123;35124;35125;35126;35127;35128;35129 28131;28132;28133;28134;28135;28136;28137 28132 1860;1861 7 9606 Homo sapiens -0.07313389976889084 MGAGLGHGMDR Unmodified 1100.4855 0.48553248 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R2T0 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 6.5 0.5 1 1 35.959 36.024 3 5.3944E-09 7963 20230619_1886_Aki_TMTPro18x_K_F6 173.64 161.42 96717 71763 93807 94003 104970 122150 108430 116370 140750 119600 122510 129820 137210 112110 118220 129040 151030 135210 89358 65907 95715 93474 108350 121210 110130 119310 140800 121050 127230 130710 138680 117150 122410 129720 144070 128420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 296710000 18523 3194;3631 17477 35130;35131 28138;28139 28139 2 9606 Homo sapiens -0.06069086114257516 MGAGMGFGLER 2 Oxidation (M) 1156.5005 0.50051385 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 2 0 5.5 0.5 1 1 41.647 41.737 2 0.0027642 10244 20230619_1886_Aki_TMTPro18x_K_F6 89.542 76.915 180670 154660 173230 199810 289490 238540 237900 228570 240660 197960 225730 193280 196660 167650 219800 232820 212950 209350 167050 141940 178420 198540 289430 238230 242860 233380 244360 201620 230890 195810 202730 177200 222800 231570 203790 199110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 733450000 18524 3194;3631 17478 35132;35133 28140 28140 1862;1863 1 9606 Homo sapiens -0.07147639036884357 MGAGMGFGLER Oxidation (M) 1140.5056 0.50559922 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 1 0 7 0.816 1 1 1 47.303 47.379 2 0.020821 12318 20230619_1887_Aki_TMTPro18x_K_F7 69.338 60.806 683650 543560 634340 635350 720450 815760 780610 752970 874170 761920 775110 766120 837350 686130 735030 881660 891310 821730 631660 498490 649880 636610 743450 809760 786320 773710 881170 769940 802580 775170 847810 720780 758630 879080 850800 781370 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 518670000 18525 3194;3631 17478 35134;35135;35136 28141 28141 1862;1863 1 9606 Homo sapiens -0.05903335174275526 MGAGMGFGLER Unmodified 1124.5107 0.5106846 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 8 0 1 53.098 53.173 2 0.00012154 14921 20230619_1888_Aki_TMTPro18x_K_F8 124.74 108.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18526 3194;3631 17478 35137 28142 28142 1 9606 Homo sapiens -0.04659031311666695 MGAMAKPDCIITCDGK 2 Oxidation (M) 1798.7722 0.77219695 2888 E7DVW5;Q01469;I6L8B7 FABP5 Fatty acid-binding protein, epidermal yes no 0 2 1 7 0 1 44.746 44.832 3 0.014854 11247 20230619_1887_Aki_TMTPro18x_K_F7 59.872 54.292 243990 223060 216960 262380 296460 219020 274960 261760 249310 321620 334140 258860 345070 265950 260680 412110 325240 306130 225570 204480 223980 261230 300150 226120 277730 266110 259210 319750 338730 266410 347650 281860 270980 405380 310430 291960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 427370000 18527 2888 17479 35138 28143 28143 1715;1716 1 9606 Homo sapiens -0.09523825579913137 MGAMAKPDCIITCDGK Oxidation (M) 1782.7773 0.77728233 2888 E7DVW5;Q01469;I6L8B7 FABP5 Fatty acid-binding protein, epidermal yes no 0 1 1 7.2 0.748 1 2 2 47.857 47.932 3;4 3.5226E-05 12657 20230619_1888_Aki_TMTPro18x_K_F8 107.98 98.018 306940 288430 319200 335140 303350 312610 351040 314840 335920 410080 433390 364740 458250 352850 360760 548960 456740 475010 284180 264340 323080 334420 317280 318050 350810 324180 347270 407840 440610 372520 462070 374850 374930 543730 436200 451880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1272200000 18528 2888 17479 35139;35140;35141;35142;35143 28144;28145 28145 1715;1716 2 9606 Homo sapiens -0.08279521717304306 MGAMAKPDCIITCDGK Unmodified 1766.7824 0.78236771 2888 E7DVW5;Q01469;I6L8B7 FABP5 Fatty acid-binding protein, epidermal yes no 0 0 1 8 0 1 51.921 51.998 4 0.00023984 14370 20230619_1888_Aki_TMTPro18x_K_F8 93.754 75.342 637700 620980 678810 733310 570200 803820 789980 799680 837490 888110 879000 747040 974560 794260 809280 1026700 942330 881370 590670 569140 685160 732370 607910 806990 785430 819440 852430 888540 903110 767260 983600 830150 834370 1019300 899910 838900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 242500000 18529 2888 17479 35144 28146 28146 1 9606 Homo sapiens -0.07035217854672737 MGANNLER Oxidation (M) 919.41816 0.41816443 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 1 0 2.5 1.12 1 1 1 1 29.059 29.12 2 0.023725 5215 20230619_1882_Aki_TMTPro18x_K_F3 79.059 59.282 45120 23767 38756 39290 67818 60461 52459 56952 62911 43098 51065 55403 48277 48473 50868 34515 61757 45551 41580 21925 40322 38660 67648 59455 54094 58020 62980 44707 52869 55412 49550 49464 52179 35597 58871 43207 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 183650000 18530 3194;3631 17480 35145;35146;35147;35148 28147 28147 1864 1 9606 Homo sapiens -0.04476793053538586 MGANNLER Unmodified 903.42325 0.4232498 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 3.5 0.5 1 1 35.402 35.454 2 0.0013766 7691 20230619_1883_Aki_TMTPro18x_K_F4 143.61 105.45 270840 179810 252760 251860 358790 378280 314700 327850 429940 312520 326530 328220 370390 300330 299600 237700 387160 320710 250010 165340 259840 250010 363210 371700 323310 337830 427130 317450 341720 331320 373280 307630 310330 244790 369120 303980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 693090000 18531 3194;3631 17480 35149;35150 28148;28149 28149 2 9606 Homo sapiens -0.03232489190929755 MGANSLER Oxidation (M) 892.40727 0.40726539 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 1 0 3.17 1.34 1 1 1 2 1 30.174 30.236 2 0.011439 5558 20230619_1882_Aki_TMTPro18x_K_F3 93.467 59.066 155640 100660 142310 148070 215640 199780 229060 348760 238250 176030 187250 177400 189830 163240 185450 172110 233230 189930 143620 92621 146820 146460 218220 201420 230620 340790 239990 187000 194610 179730 193540 169360 191190 173880 222390 180370 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 492950000 18532 3194;3631 17481 35151;35152;35153;35154;35155;35156 28150;28151;28152;28153 28151 1865 4 9606 Homo sapiens -0.04324195427830091 MGANSLER Unmodified 876.41235 0.41235077 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 4 0.816 1 1 1 36.339 36.403 2 0.0068057 8039 20230619_1885_Aki_TMTPro18x_K_F5 109.48 70.672 117610 73922 110830 122040 157460 166540 140290 145710 174690 132260 149040 146910 155300 133790 137060 114290 184300 154040 108540 68129 113910 119780 159410 164480 143480 149900 174890 134940 154360 147990 157500 137470 142140 117480 175670 146000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1874899999.9999998 18533 3194;3631 17481 35157;35158;35159 28154 28154 1 9606 Homo sapiens -0.0307989156522126 MGAVFMDAPVSGGVGAAR Unmodified 1691.8123 0.81234593 611 P31937;A0A024RA75;H7BZL2 HIBADH 3-hydroxyisobutyrate dehydrogenase, mitochondrial;3-hydroxyisobutyrate dehydrogenase yes no 0 0 0 1.5 0.5 1 1 58.747 58.753 3 0.0091206 17994 20230619_1880_Aki_TMTPro18x_K_F1 61.815 44.007 28825 24419 28880 33720 31135 30371 31691 33437 40286 30729 33257 34232 39508 34104 32933 44778 38312 41673 26660 22428 29390 33238 32157 31040 32190 33882 40253 31327 34728 34622 39825 35739 33968 44615 36628 39602 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60360000 18534 611 17482 35160;35161 28155 28155 1 9606 Homo sapiens -0.005887748028499118 MGAYHTIELEPNR Unmodified 1529.7297 0.72966216 59 A0A024QZR3;B3KPC1;Q9BRX2 hCG_2002731;PELO Protein pelota homolog yes no 0 0 0 4.5 0.5 1 1 44.776 44.837 3 1.7179E-06 11569 20230619_1885_Aki_TMTPro18x_K_F5 139.19 126.63 60196 36389 59659 63671 61830 65011 59257 63665 76537 73157 84312 76573 83438 70429 76785 73546 79273 75706 55566 33571 60693 62036 63987 65577 60468 65384 77292 73543 86038 77391 84853 73023 78314 74002 75799 71896 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62621000 18535 59 17483 35162;35163 28156 28156 1 9606 Homo sapiens -0.014013485392979419 MGCPELQIGEASITSLK Unmodified 1832.9012 0.90122052 1210 A0A140VJX5;Q96SK2-2;Q96SK2 TMEM209 Transmembrane protein 209 yes no 0 0 0 7 0 1 62.17 62.206 3 0.010633 18744 20230619_1887_Aki_TMTPro18x_K_F7 61.692 43.991 45968 35902 47445 47213 47766 50779 57692 45044 57779 55741 56420 58393 61043 49940 63716 65615 59269 63666 42504 32967 48082 46795 49819 50951 57569 46743 58808 55854 58191 58878 62262 52628 64511 65572 56782 60474 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 256770000 18536 1210 17484 35164 28157 28157 1 9606 Homo sapiens 0.018085956461845853 MGESDDSILR Oxidation (M) 1137.4972 0.49720261 3742 Q8WVC2;Q6FGH5;P63220 RPS21 40S ribosomal protein S21 yes no 0 1 0 1 0 1 39.502 39.502 2 1.4787E-13 9842 20230619_1880_Aki_TMTPro18x_K_F1 220.71 192.29 472500 404080 441870 463070 471780 548240 538940 482270 655360 518680 620660 612360 593170 538840 553300 658100 645900 611830 436790 370410 452070 463980 489900 546430 542920 498430 659040 525480 637140 615220 604710 564230 569020 656560 616870 581740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 609790000 18537 3742 17485 35165 28158 28158 2416 1 9606 Homo sapiens -0.06604610609952033 MGESDDSILR Unmodified 1121.5023 0.50228798 3742 Q8WVC2;Q6FGH5;P63220 RPS21 40S ribosomal protein S21 yes no 0 0 0 1.5 0.5 1 1 45.516 45.557 2 4.2178999999999996E-19 12369 20230619_1881_Aki_TMTPro18x_K_F2 249.46 192.18 638850 492920 504520 573770 508350 710320 661620 587280 761170 793420 746060 765250 849380 726130 669560 870280 866090 818960 589490 452090 524430 574520 533440 704810 661000 614090 769560 790170 770660 776740 855280 757900 695940 868820 826450 778570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 902300000 18538 3742 17485 35166;35167 28159;28160 28160 2 9606 Homo sapiens -0.053603067473204646 MGFTEVTPVTGASLR Unmodified 1564.7919 0.79192807 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;A0A024DAK3;A0A3B3ISU1;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 1 0 1 56.449 56.449 2 3.365E-18 17033 20230619_1880_Aki_TMTPro18x_K_F1 199.82 167.89 53539 45668 50472 57982 51405 61818 59091 62896 65994 68849 64388 63723 65684 60270 70974 73507 72227 78689 49495 41905 51595 57588 53577 62228 59362 64323 66810 69098 66214 64816 67282 62983 72164 73937 69139 74661 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74884000 18539 1718;4020 17486 35168 28161 28161 1 9606 Homo sapiens 0.03212377809018108 MGFTEVTPVTGASLR Oxidation (M) 1580.7868 0.78684269 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;A0A024DAK3;A0A3B3ISU1;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 1 0 7.5 0.5 1 1 51.368 51.446 2 5.6129E-14 14141 20230619_1888_Aki_TMTPro18x_K_F8 187.31 160.34 103750 90044 91048 101140 97663 95717 103250 106110 120330 107560 114330 117890 124820 105750 115160 132050 120360 124300 95873 82521 93688 101200 101020 97503 104320 107740 121370 108950 118080 118840 126600 110860 117650 131800 115140 118130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 76819000 18540 1718;4020 17486 35169;35170 28162;28163;28164 28164 1121 3 9606 Homo sapiens 0.019680739463865393 MGGDIANR Oxidation (M) 848.38105 0.38105064 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;F8VR77 PA2G4 Proliferation-associated protein 2G4 yes no 0 1 0 2.5 1.12 1 1 1 1 28.378 28.443 2 0.02544 4980 20230619_1882_Aki_TMTPro18x_K_F3 77.046 33.585 25503 14311 28224 31834 40149 43497 30016 36493 34990 27001 40447 42900 36805 33458 40300 20954 48975 42096 23556 13258 28641 30817 40482 42902 31032 37498 35548 28290 41108 42481 37864 34175 41282 22508 46727 39785 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 28261000 18541 654 17487 35171;35172;35173;35174 28165;28166 28166 398 2 9606 Homo sapiens -0.04920464599308616 MGGDIANR Unmodified 832.38614 0.38613602 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;F8VR77 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 3.5 0.5 1 1 35.36 35.417 2 0.00058637 7679 20230619_1883_Aki_TMTPro18x_K_F4 127.12 76.991 69045 32384 79869 78728 88756 100040 77430 83584 90873 81085 107710 103010 107660 84122 86570 53649 111100 99284 63756 30084 80352 75882 91190 99065 79207 86449 92441 82769 109650 102870 108820 85884 89556 57079 105980 93860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79906000 18542 654 17487 35175;35176 28167;28168 28168 2 9606 Homo sapiens -0.03676160736699785 MGGEEAEIR Oxidation (M) 1006.439 0.43895945 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 1 0 1.5 0.5 1 1 31.975 32.006 2 0.00093135 6752 20230619_1880_Aki_TMTPro18x_K_F1 117.81 84.014 47683 34886 43515 45522 63769 55781 54170 54457 67650 55353 67259 61792 65937 53689 56590 66923 74919 59664 44030 32040 44849 45231 64292 55630 55584 55740 68103 56115 68917 62211 66896 56342 58771 66608 71399 56802 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 544100000 18543 3811 17488 35177;35178 28169 28169 2492 1 9606 Homo sapiens -0.06400247464546283 MGGEEAEIR Unmodified 990.44404 0.44404482 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 1 0 1 38.142 38.142 2 0.01515 9285 20230619_1880_Aki_TMTPro18x_K_F1 75.825 42.704 196090 136380 176040 181130 225600 226070 212810 187500 282840 231130 288300 293130 270080 219430 229050 258660 344810 311220 180990 125300 181240 179790 230060 224360 217390 195470 284170 233270 294680 292240 274330 230930 240160 262150 328560 295170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 249990000 18544 3811 17488 35179 28170 28170 1 9606 Homo sapiens -0.051559436019374516 MGGEEKPIGAGEEK Oxidation (M) 1446.6661 0.66605885 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;D6R9F8;D6RDJ6;D6RCA5;D6RJ97;D6RCS6;D6RHV7 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 1 1 2 0 1 38.905 38.972 3 0.082839 9326 20230619_1881_Aki_TMTPro18x_K_F2 57.008 37.685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18545 2326 17489 35180 28171 28171 1434 1 9606 Homo sapiens -0.03940753767051319 MGGGGAMNMGDPYGSGGQK 3 Oxidation (M) 1818.6971 0.69711776 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7;H0Y9U2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 3 0 4.67 0.471 1 2 36.416 36.485 3 5.5481E-05 8104 20230619_1883_Aki_TMTPro18x_K_F4 82.725 78.482 47656 33148 36562 44809 59640 46688 48388 51540 50513 54813 64464 52894 55842 49145 50520 62856 53437 56237 43940 30461 38434 44309 59694 47224 49518 52391 51918 55144 65020 53722 57015 51528 51700 62539 51119 53474 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 256490000 18546 1450 17490 35181;35182;35183 28172;28173;28174 28172 950;951;952 3 9606 Homo sapiens -0.179482917867972 MGGGGAMNMGDPYGSGGQK 2 Oxidation (M) 1802.7022 0.70220313 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7;H0Y9U2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 2 0 5.86 0.99 1 1 3 2 40.522 40.6 3 2.0259E-08 9551 20230619_1886_Aki_TMTPro18x_K_F6 119.92 113.89 50600 40564 50559 57092 56459 52771 60932 62309 57545 70852 72596 67423 71685 59031 67850 69709 72737 70244 46783 37272 51483 56235 58197 53924 61095 63221 59478 70995 73709 68328 72988 61750 69341 69910 69530 66722 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 326220000 18547 1450 17490 35184;35185;35186;35187;35188;35189;35190 28175;28176;28177;28178 28175 950;951;952 4 9606 Homo sapiens -0.1670398792416563 MGGGGAMNMGDPYGSGGQK Oxidation (M) 1786.7073 0.70728851 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7;H0Y9U2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 1 0 6.5 0.5 1 1 44.065 44.153 3 3.3968E-07 10978 20230619_1887_Aki_TMTPro18x_K_F7 98.408 92.504 116190 97511 116990 127020 116020 144900 130260 130450 148860 147580 155460 144480 165400 143200 137800 183530 175110 170680 107460 89506 118850 126060 121110 144780 131110 134720 150880 148170 159530 146900 167230 149870 142920 182930 167150 162260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 350940000 18548 1450 17490 35191;35192 28179;28180;28181 28181 950;951;952 3 9606 Homo sapiens -0.154596840615568 MGGGGAMNMGDPYGSGGQK Unmodified 1770.7124 0.71237389 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7;H0Y9U2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 7.5 0.5 1 1 49.256 49.334 3 6.7504E-11 13259 20230619_1888_Aki_TMTPro18x_K_F8 141.55 137.31 67007 51023 65422 67036 55210 82784 75904 74136 75724 95533 86309 87009 92300 79351 77857 105800 109090 95349 61921 46856 66482 66580 58867 82250 75346 76889 77674 95112 88318 88463 93365 83494 81297 105220 103980 90724 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 454660000 18549 1450 17490 35193;35194 28182;28183 28183 2 9606 Homo sapiens -0.1421538019894797 MGGMEGPFGGGMENMGR Oxidation (M) 1729.6681 0.66806623 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q7KYM9;M0QYL3 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 1 0 5 0 1 52.099 52.173 3 2.9287E-06 14641 20230619_1885_Aki_TMTPro18x_K_F5 99.747 94.642 41614 35459 43262 44030 44278 48084 49313 48459 55318 54956 52798 52654 54574 47276 53789 51101 61915 53948 38502 32530 43831 43822 46036 48327 49618 49651 55932 55122 54375 53359 55620 49152 55138 51466 59106 51239 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57099000 18550 3194;3631 17491 35195 28184 28184 1866;1867 1 9606 Homo sapiens -0.16758107616760753 MGGSSGALYGLFLTAAAQPLK Oxidation (M) 2068.0663 0.066312011 316 A0A140VJH7;A0A024R529;Q3LXA3;Q9UFX5;I3L252;H0YCY6;Q3LXA3-2 DAK;DKFZp586B1621;TKFC Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes no 0 1 0 5 0 1 64.532 64.576 3 0.0080472 20001 20230619_1885_Aki_TMTPro18x_K_F5 54.103 43.469 9587 9816.7 11014 11753 10040 10913 11773 11362 13184 14037 15044 14754 12963 11744 14070 16221 14035 16203 8889.7 8997.1 11060 11702 10547 11112 11817 11652 13426 14061 15257 14848 13353 12447 14300 16220 13444 15382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4908700 18551 316 17492 35196 28185 28185 192 1 9606 Homo sapiens 0.07500150777514136 MGGSSGALYGLFLTAAAQPLK Unmodified 2052.0714 0.071397389 316 A0A140VJH7;A0A024R529;Q3LXA3;Q9UFX5;I3L252;H0YCY6;Q3LXA3-2 DAK;DKFZp586B1621;TKFC Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes no 0 0 0 6 0 1 65.288 65.332 3 6.005E-05 20486 20230619_1886_Aki_TMTPro18x_K_F6 80.975 69.535 5727.1 5274.9 5733.7 5688.9 8106.1 7030.3 6555.7 5976.5 7539.9 4743 6833.2 6581.9 5725.8 5711.2 8001.5 6339.2 6837.8 6428.7 5299.9 4831.4 5856.6 5730.8 8176.3 6990.3 6728.8 6148.5 7586.5 4922 6998.8 6574.1 5992.1 5947.5 8022.9 6371.6 6550.8 6106.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16597000 18552 316 17492 35197 28186 28186 1 9606 Homo sapiens 0.0874445464010023 MGHAGAIIAGGK Oxidation (M) 1097.5652 0.56516301 2059 Q6IAL5;B2R8A1;A8K4W7;P53597 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes no 0 1 0 1.5 0.5 1 1 36.557 36.586 3 0.0018024 8596 20230619_1880_Aki_TMTPro18x_K_F1 73.781 54.51 61441 16701 53811 56304 78276 72095 81811 72140 90139 68781 87133 80113 80276 71815 61136 79932 80386 82596 56517 15705 55679 53735 79365 71652 82482 73618 91140 70082 89163 80587 81276 74761 63673 80293 76742 78413 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80171000 18553 2059 17493 35198;35199 28187 28187 1291 1 9606 Homo sapiens 0.02028303831411904 MGHAGAIIAGGK Unmodified 1081.5702 0.57024839 2059 Q6IAL5;B2R8A1;A8K4W7;P53597 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes no 0 0 0 2.5 0.5 1 1 41.726 41.796 3 7.878E-05 10379 20230619_1882_Aki_TMTPro18x_K_F3 113.93 93.056 148420 67478 129690 149330 156360 148760 172670 177020 191280 162500 197310 185290 232070 164740 145090 188790 196470 200450 136720 62589 133810 143940 160590 151020 173720 178500 193950 165710 203480 186490 231410 172040 152140 189860 187510 190250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 247100000 18554 2059 17493 35200;35201 28188;28189 28189 2 9606 Homo sapiens 0.03272607694043472 MGIFQETLYK Unmodified 1228.6162 0.61619553 4315 Q969S0-2;Q969S0-3;Q969S0 SLC35B4 UDP-xylose and UDP-N-acetylglucosamine transporter yes no 0 0 0 1 0 1 61.813 61.813 2 0.010458 19208 20230619_1880_Aki_TMTPro18x_K_F1 95.502 56.483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18555 4315 17494 35202 28190 28190 1 9606 Homo sapiens 0.011032080855784443 MGITEYNNQCR Oxidation (M) 1400.5813 0.58128336 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;A0A804HK69;A0A804HKU1;A0A804HIG2;A0A804HKW6 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 1 0 4 0 1 36.077 36.122 2 3.0504E-06 7975 20230619_1883_Aki_TMTPro18x_K_F4 141.52 134.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18556 1736 17495 35203 28191 28191 1137 1 9606 Homo sapiens -0.10298402784701466 MGIYVGAK Oxidation (M) 853.43677 0.4367746 1831;3469 P17858;P17858-2;A0A7I2YQB6;B4E108;A0A8V8TMY4;Q01813;A0A7I2V3Z0;V9GYV7;A0A7I2V5S1;Q5VSR5 PFKL;PFKP ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, platelet type no no 0 1 0 1 0 1 44.696 44.696 2 0.022974 12184 20230619_1880_Aki_TMTPro18x_K_F1 79.939 39.253 67418 50345 53973 70692 68768 68365 75660 70403 80430 75479 92766 108730 77139 71485 90565 96388 98667 109140 62202 46271 56269 69651 70410 69359 76014 71969 82110 76993 94053 107570 79911 76244 92342 97152 94398 103490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42140000 18557 3469;1831 17496 35204 28192 28192 1170 1 9606 Homo sapiens 0.004193685883137732 MGLALSSLNK Unmodified 1032.5638 0.56376603 1650 A0A7I2V697;A0A7I2V4T9;A0A7I2V2U2;A0A7I2V5Z3;A0A7I2V588;O43765;B4DEA6 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 0 0 3.5 0.5 1 1 57.563 57.581 3 0.00027487 17314 20230619_1883_Aki_TMTPro18x_K_F4 114.39 75.368 104410 94557 102930 100840 88680 131060 102630 102860 135030 37563 30269 29448 33181 26832 65705 36064 34799 24586 96600 86604 104490 101750 93938 129510 103630 105300 131240 41428 36184 30237 35337 28247 64367 35552 33524 23511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177100000 18558 1650 17497 35205;35206 28193 28193 1 9606 Homo sapiens 0.04878669742629427 MGLAMGGGGGASFDR 2 Oxidation (M) 1414.5969 0.59693343 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M yes no 0 2 0 6.25 0.829 1 1 2 39.54 39.629 2 2.7524E-06 9369 20230619_1886_Aki_TMTPro18x_K_F6 120.55 109.4 108350 93629 84661 101100 154150 116280 130790 125890 118380 112730 125080 112900 117870 96600 110680 125540 115800 122360 100040 85777 89061 101720 153570 116820 132800 127590 121600 114610 127640 114150 120150 101730 113050 125470 110790 116230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259200000 18559 3631 17498 35207;35208;35209;35210 28194;28195;28196;28197 28195 2322;2323 4 9606 Homo sapiens -0.09378116267612313 MGLAMGGGGGASFDR Oxidation (M) 1398.602 0.6020188 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M yes no 0 1 0 7 0.707 1 2 1 45.867 45.941 2 7.369399999999999E-19 11377 20230619_1887_Aki_TMTPro18x_K_F7 186.97 163.54 78979 65481 80968 80505 86268 95746 95064 90163 101370 98569 100630 97112 104080 84407 99474 105340 105140 102730 73051 60072 82170 80279 89411 95535 95534 92721 102900 99128 103420 98245 105870 88614 101580 105360 100530 97608 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 405590000 18560 3631 17498 35211;35212;35213;35214 28198;28199;28200 28199 2322;2323 3 9606 Homo sapiens -0.08133812405003482 MGLAMGGGGGASFDR Unmodified 1382.6071 0.60710418 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 7.5 0.5 1 1 51.128 51.206 2 1.3813E-18 14029 20230619_1888_Aki_TMTPro18x_K_F8 261.41 233.01 314640 282030 348380 342670 260850 400290 359400 363280 420000 422790 370540 398620 458200 392840 368580 426840 449580 436460 291370 258630 349900 341890 281370 399270 358640 375220 422680 423450 386490 405400 460710 407270 381140 428800 429280 414500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 430220000 18561 3631 17498 35215;35216 28201;28202 28202 2 9606 Homo sapiens -0.06889508542394651 MGLVMDR Unmodified 820.39353 0.39352958 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 6.5 0.5 1 1 47.294 47.379 2 0.019071 12368 20230619_1887_Aki_TMTPro18x_K_F7 106.42 72.9 515070 410490 441110 486960 456470 585810 545390 535920 653820 580160 554490 509270 593140 482790 509200 618760 603610 592990 475630 376500 454900 486790 476270 583540 547970 552040 655880 582050 574910 519590 600130 506240 525070 617840 576540 563530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342220000 18562 3194;3631 17499 35217;35218 28203;28204 28204 2 9606 Homo sapiens -0.023851444606293626 MGNTPDSASDNLGFR Unmodified 1580.6889 0.68891956 764 A0A0S2Z5Q3;Q8NBJ7-2;Q8NBJ7;J3KQJ1;A0A024RDK8;A0A384ME15;A0A494C1B1;A8MXB9;B4DLK7;A0A0S2Z548;J3QT17;B4DQ27;E9PBT8;A0A0S2Z5C4;Q8NBJ7-5 SUMF2 Sulfatase-modifying factor 2 yes no 0 0 0 4 0 1 48.145 48.185 2 0.000322 13171 20230619_1883_Aki_TMTPro18x_K_F4 119.39 109.15 17216 12933 16400 16036 10395 13146 14429 14401 19433 17149 19821 19853 17324 18915 18999 21959 23416 24060 15904 11871 16635 15908 11404 13540 14479 14707 19512 17273 20212 20008 17875 19686 19551 22126 22366 22828 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17467000 18563 764 17500 35219 28205 28205 1 9606 Homo sapiens -0.07819734649615384 MGPAIER Unmodified 772.39016 0.39015876 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 4 0 2 37.738 37.782 2 0.013729 8622 20230619_1883_Aki_TMTPro18x_K_F4 101.21 34.177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18564 3194;3631 17501 35220;35221 28206;28207 28206 2 9606 Homo sapiens -0.0051407124298066265 MGPAMGPALGAGIER 2 Oxidation (M) 1458.6959 0.69591919 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 2 0 5.5 0.5 1 1 42.997 43.084 2 0.003982 10797 20230619_1886_Aki_TMTPro18x_K_F6 72.187 62.5 58530 53926 57153 68983 99561 82531 81893 79912 84106 68472 89080 74467 74164 60654 77116 82623 73586 81215 54153 49473 58855 68585 99355 82432 83639 81515 85699 70011 90422 74962 76276 64189 78208 82578 70494 77125 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 156890000 18565 3194;3631 17502 35222;35223 28208;28209 28209 1868;1869 2 9606 Homo sapiens -0.015080933027320498 MGPAMGPALGAGIER Oxidation (M) 1442.701 0.70100457 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 1 0 7 0.816 1 1 1 48.04 48.115 2 5.8086E-05 12644 20230619_1887_Aki_TMTPro18x_K_F7 103.89 94.402 201120 170980 181490 205970 201310 209920 206120 188270 219590 235690 233210 226110 234910 193070 230270 259640 236560 244320 185860 156810 186420 205170 207600 211560 207970 195190 223630 235350 238690 228900 239420 203790 234750 258900 226330 232190 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 439790000 18566 3194;3631 17502 35224;35225;35226 28210;28211 28211 1868;1869 2 9606 Homo sapiens -0.002637894401232188 MGPAMGPALGAGIER Unmodified 1426.7061 0.70608995 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 7.5 0.5 1 1 53.102 53.175 2 9.4594E-14 14880 20230619_1888_Aki_TMTPro18x_K_F8 211.37 170.39 157860 126110 148260 155100 128140 177400 169850 161850 189240 189440 170020 162610 198810 164400 173890 203350 183350 203420 145880 115710 151200 154550 136120 177250 169430 167160 191000 189210 176560 166410 200790 171650 177960 203640 175480 193130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 270460000 18567 3194;3631 17502 35227;35228 28212;28213 28213 2 9606 Homo sapiens 0.009805144224856122 MGPGAASGGERPNLK Oxidation (M) 1456.7093 0.70926107 4495 Q9H0U4;E9PLD0;Q6FIG4 RAB1B Ras-related protein Rab-1B yes no 0 1 1 7.33 0.471 2 1 35.846 35.89 3;4 4.9605E-05 7791 20230619_1888_Aki_TMTPro18x_K_F8 97.866 85.889 147790 125630 139530 146210 185540 168950 180910 168090 186570 199500 221260 174460 196380 162090 218210 165890 170450 152050 136630 115180 143120 146310 188660 169230 182830 172600 191180 199160 224040 177900 202120 167840 218580 166080 163420 144630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 710040000 18568 4495 17503 35229;35230;35231 28214;28215 28215 2793 2 9606 Homo sapiens -0.000825191991225438 MGPGATAGGAEK Unmodified 1045.4862 0.48624399 3725 Q5U0I6;P62820;B7Z8M7;E7END7;P62820-2;P62820-3;Q96RD8 RAB1A Ras-related protein Rab-1A yes no 0 0 0 5 0 1 39.072 39.163 2 0.0024976 9180 20230619_1885_Aki_TMTPro18x_K_F5 113.93 78.046 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18569 3725 17504 35232 28216 28216 1 9606 Homo sapiens -0.034679681935585904 MGPGIDR Oxidation (M) 760.35377 0.35377325 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R2T0 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 1 0 3.6 1.02 1 1 2 1 30.83 30.902 2 0.029795 5957 20230619_1881_Aki_TMTPro18x_K_F2 91.14 60.696 181160 127370 153360 171770 241320 233010 222050 223100 260900 187280 234410 227670 225600 200060 202690 208930 282010 246640 167150 117040 159520 170580 243020 230770 226110 227600 262270 192560 241300 228440 229590 207740 210900 211920 268810 233990 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 343650000 18570 3194;3631 17505 35233;35234;35235;35236;35237 28217;28218 28217 1870 2 9606 Homo sapiens -0.035989481396882184 MGPGIDR Unmodified 744.35886 0.35885863 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R2T0 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 4 0.816 1 1 1 36.604 36.668 2 0.048576 8155 20230619_1883_Aki_TMTPro18x_K_F4 86.866 58.759 329060 247360 286080 311620 417500 420090 382640 382630 499210 382890 417040 409190 451690 375030 360730 410840 487420 445040 303790 227070 296290 310800 422300 415780 391260 393380 498440 388060 433090 413120 455670 389970 375650 414080 464840 422490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 524660000 18571 3194;3631 17505 35238;35239;35240 28219;28220 28220 2 9606 Homo sapiens -0.023546442770680187 MGPGIGAILER Unmodified 1112.6012 0.60121417 923 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;Q9Y655;A0A087WUT0;A0A024R5Q6;A0A0C4DGV1;H0YN19;Q9P2K5-3;H0YKS1 MYEF2 Myelin expression factor 2 yes no 0 0 0 4.5 3.5 1 1 56.753 56.781 2 0.0010886 16479 20230619_1888_Aki_TMTPro18x_K_F8 102.01 78.038 170650 148170 156120 177670 106000 126720 149560 144920 157990 190760 175390 184790 205160 161210 175250 201910 213540 211400 157740 135880 159170 176370 115340 132460 148620 148130 161350 190060 180500 187020 206960 169320 180980 202690 203930 200690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 176460000 18572 923 17506 35241;35242 28221;28222 28222 2 9606 Homo sapiens 0.049417610082628016 MGPLGLDHMASSIER Oxidation (M) 1628.7651 0.76506139 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 1 0 5.2 0.748 1 2 2 47.424 47.496 3 8.5473E-11 13129 20230619_1885_Aki_TMTPro18x_K_F5 156.2 139.97 192020 164840 191300 203400 221170 238760 226740 221650 250020 213910 230880 228180 236580 198080 217130 236010 243700 238360 177600 151210 194910 202700 227470 238370 229000 227430 252550 217100 238030 230040 240360 207330 222700 236650 232870 226390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 697180000 18573 3194;3631 17507 35243;35244;35245;35246;35247 28223;28224;28225 28224 1871;1872 3 9606 Homo sapiens -0.024170540738396085 MGPLGLDHMASSIER Unmodified 1612.7701 0.77014677 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 6.5 0.5 1 1 52.956 53.03 3 7.7859E-43 14905 20230619_1887_Aki_TMTPro18x_K_F7 288.29 272.06 367500 318400 382650 401630 344710 444320 412380 437150 400530 425180 367650 381030 431210 364540 377710 463360 435970 457300 340060 292130 387080 399340 363210 445690 411690 446660 407750 428900 381690 388330 435600 381880 388720 463440 416720 434330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 821200000 18574 3194;3631 17507 35248;35249 28226;28227 28227 2 9606 Homo sapiens -0.011727502112080401 MGPLINRPHLER Oxidation (M) 1447.7718 0.77180175 2459 B4DE91;P49189;B4DX14;P49189-3;P49189-2;B4DYY1 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 1 1 1.5 0.5 1 1 35.081 35.109 4 0.0059515 7745 20230619_1881_Aki_TMTPro18x_K_F2 85.845 50.4 59755 41445 52066 55546 62707 68123 63184 67023 75056 57148 58327 68105 68322 62153 63900 70213 68268 73281 55142 38083 53711 55095 64331 67892 64042 68267 75093 58651 61145 68435 69243 64713 65332 70586 65311 69551 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127720000 18575 2459 17508 35250;35251 28228;28229 28229 1516 2 9606 Homo sapiens 0.0658267165970301 MGPLINRPHLER Unmodified 1431.7769 0.77688712 2459 B4DE91;P49189;B4DX14;P49189-3;P49189-2;B4DYY1 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 1 3 0 1 39.775 39.831 4 0.00014329 9552 20230619_1882_Aki_TMTPro18x_K_F3 116.54 86.1 46452 34562 47124 51694 52727 49227 50187 57879 70243 57845 67625 63815 59393 48304 53217 65072 74720 63943 42934 31789 47912 50755 54219 50169 51393 58514 70268 58646 69102 64018 60596 51229 55472 65023 71209 60785 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90979000 18576 2459 17508 35252 28230 28230 1 9606 Homo sapiens 0.07826975522334578 MGPNIYELR Oxidation (M) 1107.5383 0.53827956 2044 A8K4I8;Q9BPW8;B4DQI7;H7C2U6;C9JDV8 NIPSNAP1 Protein NipSnap homolog 1 yes no 0 1 0 6.5 0.5 1 1 46.599 46.684 2 0.012647 12409 20230619_1886_Aki_TMTPro18x_K_F6 73.196 52.249 349770 312610 360970 411760 414290 428830 427480 444650 451000 416370 488370 478070 461070 414420 455960 443390 493380 520550 323690 286920 366840 407840 426150 432720 431090 452420 459450 424170 498110 480460 471340 431100 465740 449490 471890 493510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 384460000 18577 2044 17509 35253;35254 28231 28231 1287 1 9606 Homo sapiens -0.01118804779821403 MGPNIYELR Unmodified 1091.5434 0.54336494 2044 A8K4I8;Q9BPW8;B4DQI7;H7C2U6;C9JDV8 NIPSNAP1 Protein NipSnap homolog 1 yes no 0 0 0 7.5 0.5 1 1 51.558 51.634 2 0.00066684 14313 20230619_1887_Aki_TMTPro18x_K_F7 127.68 89.593 647110 577580 649310 704620 558820 703910 709300 712060 741680 783990 829320 857110 893060 741230 809360 896520 880470 969140 598720 529690 658520 701210 592220 711870 707730 728930 757420 790520 849790 862930 905320 776810 828920 902220 842350 919400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 975090000 18578 2044 17509 35255;35256 28232;28233 28232 2 9606 Homo sapiens 0.0012549908281016542 MGPPVGGHR Oxidation (M) 922.44432 0.4443196 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 1 0 4.38 3.16 3 1 2 2 25.633 25.67 2;3 0.00044407 4619 20230619_1888_Aki_TMTPro18x_K_F8 110.12 75.312 103850 63907 129360 123170 169870 167410 138710 161620 150310 115650 149260 159920 123260 119730 137960 91778 176200 159770 96078 59033 129820 120010 172180 165720 142110 164120 152310 120700 152160 158880 127370 123360 141860 96557 168100 151090 8 7 8 7 8 8 8 7 8 8 8 8 7 8 8 7 8 8 121650000 18579 1455;1520 17510 35257;35258;35259;35260;35261;35262;35263;35264 28234;28235;28236;28237;28238;28239;28240;28241;28242 28241 958 9 9606 Homo sapiens -0.02000479091395846 MGPPVGGHR Unmodified 906.4494 0.44940497 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 0 0 3.67 3.09 1 1 1 30.737 30.763 2;3 0.00029269 6257 20230619_1880_Aki_TMTPro18x_K_F1 110.12 78.748 32367 21206 27890 32753 32172 35037 32590 36621 44951 31002 36042 37084 40166 32656 35716 37629 45511 36181 29857 19523 28797 32141 33119 35275 33219 37145 44693 31842 37582 37235 40656 34093 36942 37652 43386 34414 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67233000 18580 1455;1520 17510 35265;35266;35267 28243;28244 28243 2 9606 Homo sapiens -0.007561752287870149 MGPSGGEGMEPERR 2 Oxidation (M) 1520.6348 0.6347755 157 A0A024R1S8;Q14847;A8K1D2;Q14847-2;C9J9W2;Q14847-3;Q9NPR7 LASP1 LIM and SH3 domain protein 1 yes no 0 2 1 1.5 0.5 1 1 23.117 23.153 3 0.00080201 3816 20230619_1880_Aki_TMTPro18x_K_F1 76.196 56.456 20061 15156 15456 20429 29244 23145 22660 24839 26621 17818 29691 26044 24542 19946 28360 23273 26248 23810 18506 13923 16310 20226 29053 23256 23350 25068 26974 18641 30075 25890 25380 20949 28626 23383 25118 22618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86394000 18581 157 17511 35268;35269 28245 28245 88;89 1 9606 Homo sapiens -0.10471650072827288 MGPSGGEGMEPERR Oxidation (M) 1504.6399 0.63986087 157 A0A024R1S8;Q14847;A8K1D2;Q14847-2;C9J9W2;Q14847-3;Q9NPR7 LASP1 LIM and SH3 domain protein 1 yes no 0 1 1 2.5 0.5 1 1 29.568 29.654 3 1.9543E-05 5599 20230619_1881_Aki_TMTPro18x_K_F2 123.28 100.05 31152 20751 27803 27750 31864 32414 34761 33511 39999 33114 35611 38949 36793 33346 36821 38806 43024 38364 28746 19070 28582 27513 32843 32449 35034 34150 40258 33675 36825 39083 37539 34855 37792 38883 41073 36460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 134680000 18582 157 17511 35270;35271 28246 28246 88;89 1 9606 Homo sapiens -0.09227346210218457 MGPVMDR Oxidation (M) 820.35714 0.35714407 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 1 0 3.5 0.5 1 1 32.726 32.79 2 0.058012 6605 20230619_1883_Aki_TMTPro18x_K_F4 74.415 35.453 64081 53490 62791 67605 85443 94649 82284 86138 98653 76545 89313 81596 86847 78546 81088 83811 100440 88713 59252 49084 64271 67457 86897 93445 83640 88291 99130 78081 91913 82556 88498 81387 83633 84414 95834 84251 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118860000 18583 3194;3631 17512 35272;35273 28247 28247 1873 1 9606 Homo sapiens -0.06022021357330232 MGPYPQR Unmodified 847.40106 0.4010578 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 8 0 1 36.691 36.677 2 0.06157 8149 20230619_1888_Aki_TMTPro18x_K_F8 80.999 46.106 87205 66051 87395 88973 104050 127390 111600 104360 139750 80288 81250 84139 77604 65406 89515 87706 95159 87225 80600 60675 89053 88442 107100 125310 112880 107560 138250 82680 86009 84633 79926 69265 91113 87758 90938 82881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33432000 18584 874 17513 35274 28248 28248 1 9606 Homo sapiens -0.02874668868696517 MGQAVPAPTGAPPGGQPDYSAAWAEYYR Oxidation (M) 2923.3235 0.32354234 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31 FUBP1 Far upstream element-binding protein 1 no no 0 1 0 7.5 0.5 1 1 59.147 59.192 3 1.1565E-20 17459 20230619_1887_Aki_TMTPro18x_K_F7 149.99 143.83 24874 20966 23497 29605 25128 28739 28238 24911 24774 30352 30635 28159 34685 28051 27762 33717 31602 36624 22994 19261 24048 29156 26051 29032 28186 25878 25699 30312 31315 28696 34931 29255 28598 33935 30234 34737 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113620000 18585 2644;4322 17514 35275;35276 28249;28250 28249 1596 2 9606 Homo sapiens -0.061186485977032135 MGQAVPAPTGAPPGGQPDYSAAWAEYYR Unmodified 2907.3286 0.32862772 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 8 0 1 61.39 61.419 3 4.5382E-29 18374 20230619_1888_Aki_TMTPro18x_K_F8 180.83 172.84 33895 28012 33962 37775 30788 39038 31679 37515 39918 40491 40625 39652 47007 36240 39919 53293 45953 45467 31345 25724 34471 37353 32309 39325 32177 38498 40247 40735 41915 40212 47416 38403 41125 52800 43906 43270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167090000 18586 2644;4322 17514 35277 28251 28251 1 9606 Homo sapiens -0.0487434473511712 MGQMAMGGAMGINNR Oxidation (M) 1553.6571 0.65710762 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9 NONO Non-POU domain-containing octamer-binding protein yes no 0 1 0 2 0 1 45.143 45.224 3 0.00062403 12312 20230619_1881_Aki_TMTPro18x_K_F2 78.401 72.161 103820 87415 117670 118800 126940 142370 133620 130970 142390 133770 138490 133030 150280 115570 139430 127120 165780 129710 96124 80274 118540 117680 131260 141880 134630 134650 144430 135040 142770 134490 152430 120470 143340 127770 158110 123300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161340000 18587 1112 17515 35278 28252 28252 697;698;699;700 1 9606 Homo sapiens -0.09757465200368642 MGQMAMGGAMGINNR Unmodified 1537.6622 0.662193 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 3.5 0.5 1 1 50.996 51.047 2 5.5992E-28 14442 20230619_1883_Aki_TMTPro18x_K_F4 221.5 204.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18588 1112 17515 35279;35280 28253;28254 28254 2 9606 Homo sapiens -0.08513161337759811 MGQMAMGGAMGINNR 4 Oxidation (M) 1601.6419 0.64185148 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9 NONO Non-POU domain-containing octamer-binding protein yes no 0 4 0 6.5 1.12 1 1 1 1 29.543 29.601 3 1.5953E-05 5513 20230619_1885_Aki_TMTPro18x_K_F5 98.337 92.614 9390.3 7045.8 7384 8859.4 15446 15438 15317 12235 10683 9383 13915 11068 7154.8 9199.4 11887 11355 10603 11417 8663.1 6467.8 7786.8 8864.4 15379 15039 15236 12648 11258 9609 13811 11115 7721.1 9613.9 11933 11379 10155 10840 4 4 4 4 5 5 4 5 4 4 4 5 4 4 5 4 4 4 41649000 18589 1112 17515 35281;35282;35283;35284 28255;28256;28257;28258 28255 697;698;699;700 4 9606 Homo sapiens -0.13490376788217873 MGQMAMGGAMGINNR 3 Oxidation (M) 1585.6469 0.64693686 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9 NONO Non-POU domain-containing octamer-binding protein yes no 0 3 0 7.5 0.5 2 2 34.212 34.248 3 0.00030829 6851 20230619_1887_Aki_TMTPro18x_K_F7 85.837 81.271 28412 18951 27989 26511 31711 24447 22871 26503 32008 27973 38521 36067 33235 24510 35704 27475 38948 37995 26238 17425 28491 26130 32344 24950 23887 26973 32329 28433 38969 35858 34177 25850 36395 28175 37228 35979 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 164120000 18590 1112 17515 35285;35286;35287;35288 28259;28260;28261 28259 697;698;699;700 3 9606 Homo sapiens -0.12246072925586304 MGQTMER Unmodified 851.36296 0.36295773 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 3.5 0.5 1 1 33.292 33.354 2 0.035759 6888 20230619_1883_Aki_TMTPro18x_K_F4 92.653 60.698 80236 36571 98997 108870 139140 179870 114320 123170 123430 94178 125610 160170 139440 134150 113850 52799 177250 166670 74131 34130 99701 104710 140850 174950 117030 128950 125240 98829 129600 158440 140820 135010 119350 60959 168910 157130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128080000 18591 3194;3631 17516 35289;35290 28262 28262 1 9606 Homo sapiens -0.06866922845676982 MGSGIQYGDAALR Unmodified 1337.6398 0.63978452 264 Q53GC2;A0A024R3U9;P20338;A0A087WYT5 RAB4A Ras-related protein Rab-4A no no 0 0 0 7 0 1 48.544 48.631 2 0.036384 12974 20230619_1887_Aki_TMTPro18x_K_F7 83.045 66.118 46375 43722 55362 56395 41381 60355 49833 52163 60864 69518 73530 77294 74421 70352 63885 81556 88756 94124 42991 40112 55301 55956 44423 60506 50145 54325 61916 69561 74897 77872 75496 73378 66619 82422 84718 89246 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51410000 18592 264 17517 35291 28263 28263 1 9606 Homo sapiens -0.015529781479017402 MGSGVER Unmodified 734.33812 0.33812319 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 2.5 0.5 1 1 30.949 31.025 2 0.033749 5990 20230619_1882_Aki_TMTPro18x_K_F3 93.561 64.251 65464 30916 93129 91101 143270 142460 102090 138290 87888 58363 118820 135760 81015 94439 111950 30013 134580 114440 60584 28838 93019 87613 143490 139930 105030 139310 91405 65582 118980 132780 85531 95321 114070 36210 128410 107870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84082000 18593 3194;3631 17518 35292;35293 28264 28264 1 9606 Homo sapiens -0.03967234656749952 MGTPHLQK Oxidation (M) 926.46439 0.46438634 3619;2880 P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96;K7EMQ3;B4DJ53;E5RHK8;H0YBC6;Q9UQ16-2;Q9UQ16-3;Q9UQ16;Q9UQ16-4;A0A8I5KXV5;B3KPF2;Q9UQ16-5;E5RIK2 DNM2;DNM3 Dynamin-2;Dynamin-3 no no 0 1 0 7.5 0.5 1 1 34.994 35.027 3 0.0082437 7484 20230619_1888_Aki_TMTPro18x_K_F8 72.968 38.715 81388 58096 76844 76550 96784 90087 94828 95541 116240 71444 79804 69135 67058 61792 88447 65994 87675 69683 75163 53367 78721 75982 98804 90218 96354 96565 115600 73501 83008 70090 69915 64195 89387 66539 83769 66212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46564000 18594 3619;2880 17519 35294;35295 28265 28265 1708 1 9606 Homo sapiens -0.00178728151456653 MGTPVPRPPQDMGQIGVR 2 Oxidation (M) 1966.9717 0.97170012 3850 Q13435;E9PPJ0;E9PJ04;H0YCG1;E9PJT3 SF3B2 Splicing factor 3B subunit 2 yes no 0 2 1 4.5 3.5 1 1 40.106 40.1 3 0.018402 9523 20230619_1888_Aki_TMTPro18x_K_F8 51.798 38.119 43934 37664 41540 48122 54915 50730 48205 51321 54941 47476 53086 52692 54278 46841 46516 58230 56819 61342 40619 34562 42623 47766 55736 51137 49211 52284 55508 48354 54597 53086 55005 49113 48073 58470 54296 58214 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57408000 18595 3850 17520 35296;35297 28266;28267 28267 2526;2527 2 9606 Homo sapiens 0.026893137544675483 MGVFAQADGSAYIEQGNTK Unmodified 1985.9153 0.91529068 4560 Q9NPD3;A0A994J4D9;E9PPI9 EXOSC4 Exosome complex component RRP41 yes no 0 0 0 6 0 1 57.839 57.908 3 3.0102E-08 17257 20230619_1886_Aki_TMTPro18x_K_F6 119.8 108.11 22034 20771 21347 23166 17908 25676 28122 23092 25183 36810 34570 31230 41160 30171 32464 38179 34085 37768 20389 19029 21715 23236 19179 25708 27667 24144 26245 36281 35290 31928 41344 31612 33287 38197 32622 35863 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39357000 18596 4560 17521 35298 28268 28268 1 9606 Homo sapiens -0.03823035601180891 MGVITVSGLAGLVSAR Unmodified 1529.8599 0.85994805 4136 Q6UXV4;Q68DW4 APOOL;DKFZp779P1227 MICOS complex subunit MIC27 yes no 0 0 0 7 0 1 63.905 63.934 3 1.5925E-05 19613 20230619_1887_Aki_TMTPro18x_K_F7 108.34 77.509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18597 4136 17522 35299 28269 28269 1 9606 Homo sapiens 0.11621247459675033 MGVPICGACR Oxidation (M) 1135.4937 0.49365433 1047 A0A0J9YXC7;A0A8Q3WLX8;P48059-3;A0A8Q3WKK6;A0A8Q3WKP0;P48059-5;A0A8Q3WKI3;P48059-2;A0A0M3HER1;P48059;P48059-4;A0A8Q3WKJ2;A0A8Q3WLN4;A0A024RAH1;B3KNZ3;Q7Z4I4;Q7Z4I5;Q7Z4I3;Q7Z4I7-3;Q7Z4I7;Q7Z4I7-5;Q7Z4I7-2;Q7Z4I7-4 LIMS1;LIMS2 LIM and senescent cell antigen-like-containing domain protein 1;LIM and senescent cell antigen-like-containing domain protein 2 yes no 0 1 0 8 0 1 37.984 37.97 2 0.001232 8641 20230619_1888_Aki_TMTPro18x_K_F8 104.45 94.86 18167 15505 15280 15444 25963 24364 21614 20881 34453 12403 10617 9038 8887.5 9021.6 18051 12037 12775 8890 16781 14196 15920 15726 26005 23896 22410 21338 33359 12939 11943 9342.1 9580.8 9457.5 17868 11892 12247 8491.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8364500 18598 1047 17523 35300 28270 28270 610 1 9606 Homo sapiens -0.06867275189142674 MGVPYCIIK Oxidation (M) 1095.5457 0.54567312 3722 P62424;Q9BY74;Q5T8U2 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 0 1 0 2.5 0.5 1 1 53.299 53.341 2;3 0.00067556 15640 20230619_1882_Aki_TMTPro18x_K_F3 100.15 72.136 304340 281040 282640 296230 298660 323760 338890 325440 383070 227550 172200 153580 234020 169320 238490 265750 292370 237950 281470 257360 289260 298430 310050 325450 340550 329760 379040 233280 189300 160110 237110 179430 245520 263830 278840 226500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 211870000 18599 3722 17524 35301;35302 28271;28272 28272 2404 2 9606 Homo sapiens 0.0017221149626038823 MGVPYCIIK Unmodified 1079.5508 0.5507585 3722 P62424;Q9BY74;Q5T8U2 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 0 0 0 3.5 0.5 1 1 58.344 58.361 2 0.00050183 17738 20230619_1882_Aki_TMTPro18x_K_F3 151.51 109.4 673060 555260 573030 609040 461060 663740 667910 661170 717130 391720 226030 201270 347480 243810 379060 435980 412570 271570 621630 508850 589200 611610 494760 666640 662690 668420 707470 405140 260480 214970 352310 260440 386990 425650 393440 260190 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 470360000 18600 3722 17524 35303;35304 28273;28274;28275 28273 3 9606 Homo sapiens 0.014165153588919566 MGVVECAK Oxidation (M) 908.40957 0.40957357 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2 PA2G4 Proliferation-associated protein 2G4 yes no 0 1 0 5 0.816 1 1 1 38.636 38.708 2 0.008019 8970 20230619_1885_Aki_TMTPro18x_K_F5 98.523 72.786 187250 134700 168280 181430 229980 200710 209470 230120 240590 207280 233150 214420 244150 202090 215930 203710 276150 217590 172870 123760 173470 179650 233100 202270 213380 232350 242990 210940 239910 217000 247510 209010 223280 205540 263230 206740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 188250000 18601 654 17525 35305;35306;35307 28276;28277;28278 28277 399 3 9606 Homo sapiens -0.0482948301438455 MGVVECAK Unmodified 892.41466 0.41465895 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 5.5 0.5 1 1 44.822 44.905 2 0.0066752 11634 20230619_1886_Aki_TMTPro18x_K_F6 109.86 61.956 540690 395150 483890 480340 556730 590230 547730 559620 704060 627700 695280 671730 733600 602560 602390 626960 803380 703240 499190 362650 497300 479630 572480 587890 557670 575510 707900 632290 715100 677560 741290 625350 626010 633910 766030 667500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 770770000 18602 654 17525 35308;35309 28279;28280 28280 2 9606 Homo sapiens -0.035851791517643505 MGYQCTFGVLQAGQYGVAQTR Oxidation (M) 2350.0834 0.083435414 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;B3KVA0;K7ENW7 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 1 0 4 0 1 57.316 57.321 3 3.1824E-08 17226 20230619_1883_Aki_TMTPro18x_K_F4 108.96 104.09 52930 49583 57133 56869 53520 64950 57945 57289 70928 68350 63867 64009 68395 59709 66577 69524 71779 80849 49019 45437 57638 56953 56048 64888 58583 59350 71263 68372 66067 65023 69593 62276 68037 70329 68690 76638 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33376000 18603 442 17526 35310 28281;28282 28282 272 2 9606 Homo sapiens -0.0376029667900184 MGYQCTFGVLQAGQYGVAQTR Unmodified 2334.0885 0.088520791 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;B3KVA0;K7ENW7 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 4.5 0.5 1 1 60.619 60.646 3 1.5557E-11 18180 20230619_1885_Aki_TMTPro18x_K_F5 128.4 113.24 31894 29252 35227 36408 28198 33417 39208 34861 41670 40294 41423 40388 43828 38229 36690 43711 40740 43989 29539 26829 35416 36147 30143 34050 38969 35682 42296 40440 42606 40930 44322 39794 37698 43836 38963 41767 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65054000 18604 442 17526 35311;35312 28283;28284 28284 2 9606 Homo sapiens -0.025159928163702716 MHALSLK Oxidation (M) 814.43711 0.43710895 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2;B3KMK3 NUP155 Nuclear pore complex protein Nup155 yes no 0 1 0 2 0 1 38.065 38.129 3 0.046402 8969 20230619_1881_Aki_TMTPro18x_K_F2 55.504 20.011 86747 45856 68286 83125 98307 100540 90413 88024 121840 70645 84806 71903 78610 72599 84062 75720 93296 73823 79894 42356 71435 81022 99565 100010 92529 90335 120690 72497 88406 73039 80755 75003 85837 75977 89041 70209 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33817000 18605 81 17527 35313 28285 28285 38 1 9606 Homo sapiens 0.0224678830816174 MHCCDEVQPK Oxidation (M) 1318.5104 0.51042661 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 1 0 3 0.816 1 1 1 31.465 31.535 3 0.00035142 6190 20230619_1882_Aki_TMTPro18x_K_F3 104.43 97.581 113810 23830 92095 104120 115960 83584 106680 109300 145950 120480 140910 129500 152050 124930 81838 125520 122660 126280 104580 22661 95726 98133 118080 86624 109310 110200 146190 121490 145090 130940 151480 129070 86949 126060 116990 119920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 191980000 18606 3892 17528 35314;35315;35316 28286;28287;28288 28287 2571 3 9606 Homo sapiens -0.13608819093860802 MHCCDEVQPK Unmodified 1302.5155 0.51551198 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 3.5 0.5 1 1 35.231 35.284 3 0.00014277 7675 20230619_1882_Aki_TMTPro18x_K_F3 101.97 99.34 90520 22175 67123 80981 87939 66146 85797 91917 114770 101020 110650 96750 124250 95204 67048 97736 95426 100650 83156 20924 70488 76651 89501 68566 87520 92350 115090 101490 114120 98397 123600 98456 70922 98260 91065 95552 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 275580000 18607 3892 17528 35317;35318 28289;28290 28289 2 9606 Homo sapiens -0.12364515231229234 MHDLNTDQENLVGTHDAPIR Oxidation (M) 2291.0601 0.060057435 1173 J3QT28;A0A140VJF3;O43684-2;O43684;B4DDM6;J3QSX4 BUB3 Mitotic checkpoint protein BUB3 yes no 0 1 0 2.5 0.5 1 1 39.847 39.91 4 4.1027E-11 9604 20230619_1882_Aki_TMTPro18x_K_F3 131.9 127.63 125540 77294 115100 124950 150860 137140 147970 147450 172410 125310 165630 160970 152310 124080 136190 147030 151200 149580 115830 71223 118360 122380 153600 137990 150090 149340 173780 128960 169620 160620 155080 130420 139660 147510 144510 142050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 292010000 18608 1173 17529 35319;35320 28291;28292 28292 719 2 9606 Homo sapiens -0.03383019191960557 MHDLNTDQENLVGTHDAPIR Unmodified 2275.0651 0.065142812 1173 J3QT28;A0A140VJF3;O43684-2;O43684;B4DDM6;J3QSX4 BUB3 Mitotic checkpoint protein BUB3 yes no 0 0 0 3 0 1 43.474 43.544 4 3.486E-37 11160 20230619_1882_Aki_TMTPro18x_K_F3 239.43 226.01 70596 24612 44322 66017 61343 41003 62346 70732 77775 77729 87137 75465 93510 72326 55955 93403 65913 82914 64843 22961 47561 62862 62276 44038 63287 70387 78741 78082 89097 76690 93388 75846 58327 92823 63087 78801 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 246240000 18609 1173 17529 35321 28293 28293 1 9606 Homo sapiens -0.021387153293744632 MHEVSFQDK Oxidation (M) 1135.4968 0.49680868 1036 O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;A0A7I2V581;Q57Z91;O60282-2;A0A7I2V352;A0A7I2YQQ7;Q3LIE3 KIF5C;Nbla04137 Kinesin heavy chain isoform 5C;Kinesin-like protein yes no 0 1 0 4 0 1 37.367 37.411 3 0.0071534 8499 20230619_1883_Aki_TMTPro18x_K_F4 70.056 60.005 60841 35282 49885 65679 70114 55442 68580 65832 98567 65976 81883 68079 69389 58359 64342 70293 70389 64873 56072 32586 51962 63639 71091 57091 70115 66569 97912 66795 84135 68753 70979 61143 65883 70134 67251 61695 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48630000 18610 1036 17530 35322 28294 28294 604 1 9606 Homo sapiens -0.06551985539113048 MHFVPWLAR Unmodified 1155.6012 0.60115459 4474 S4R369;Q9BZE1 MRPL37 39S ribosomal protein L37, mitochondrial yes no 0 0 0 7 0 1 55.162 55.223 3 0.008255 15845 20230619_1887_Aki_TMTPro18x_K_F7 56.729 34.643 23703 18733 23996 17408 20640 23627 25777 24949 28124 24516 21492 26277 25284 21393 26193 26339 25481 28366 21915 17146 24264 17804 21846 23459 25766 25376 28255 24855 22572 26414 25730 22494 26581 26502 24407 26910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79231000 18611 4474 17531 35323 28295 28295 1 9606 Homo sapiens 0.029578057989056106 MHGGGPTVTAGLPLPK Oxidation (M) 1547.813 0.81299786 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKS0;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 1 0 2 0 1 47.403 47.478 3 0.00016127 13267 20230619_1881_Aki_TMTPro18x_K_F2 89.507 63.383 253720 177430 254520 228700 252630 285840 309130 260640 290640 189880 200300 167600 198420 153640 239020 192110 185170 147650 234410 162970 258350 227560 264000 284060 307700 266230 293180 195220 209620 170890 204370 161000 239090 190140 177430 140850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 252240000 18612 2973 17532 35324 28296 28296 1758 1 9606 Homo sapiens 0.06100387908531957 MHGGGPTVTAGLPLPK Unmodified 1531.8181 0.81808324 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKS0;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 3 0 2 49.892 49.967 3;4 4.0439E-08 14109 20230619_1882_Aki_TMTPro18x_K_F3 127.79 114.91 207430 171880 207190 223980 216750 239770 264440 263300 279350 242360 238540 219690 258880 208260 238740 254160 257570 254790 191810 157780 210770 222130 225620 241750 264280 266770 282050 245400 247460 223790 262560 217720 244240 254670 246240 242000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 569910000 18613 2973 17532 35325;35326 28297;28298 28298 2 9606 Homo sapiens 0.07344691771163525 MHNIPVYK Unmodified 1000.5164 0.51642191 325 A0A024R578;Q13405;H0YDP7;Q59GE9;E9PNF1 MRPL49 39S ribosomal protein L49, mitochondrial yes no 0 0 0 2 0 1 42.768 42.849 3 0.037701 11165 20230619_1881_Aki_TMTPro18x_K_F2 53.166 35.435 81426 54139 70353 81873 82943 80073 90167 96573 109710 68696 88785 93433 76988 75725 83215 74604 103650 89005 75119 49827 72639 80359 85310 81472 91086 96776 109650 71715 91608 93134 79351 78590 85580 75834 98869 84438 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74623000 18614 325 17533 35327 28299 28299 1 9606 Homo sapiens 0.01618435262287221 MHNQIPQVTSDGK Oxidation (M) 1469.6933 0.69327665 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 1 0 6.5 0.5 1 1 37.748 37.818 3 0.019995 8357 20230619_1887_Aki_TMTPro18x_K_F7 53.947 39.261 21446 11522 21909 20522 27795 27488 26608 29031 26598 23067 29786 25189 28922 22529 21859 27762 29375 22774 19792 10639 22296 20070 28340 27292 26907 29375 27209 23695 30332 25420 29199 23603 22797 27522 27987 21708 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 247530000 18615 1661 17534 35328;35329 28300 28300 1081 1 9606 Homo sapiens -0.022782254360436127 MHNQIPQVTSDGK Unmodified 1453.6984 0.69836203 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 7 0 1 40.882 40.95 3 5.7084E-06 9633 20230619_1887_Aki_TMTPro18x_K_F7 123.26 110.28 57214 23248 45923 60452 60585 49616 55448 51752 79082 72178 85170 77319 83298 78826 54909 99896 82094 82866 52651 21648 47872 57761 61567 51029 56921 53307 79441 72047 86904 78393 83800 82306 58089 98963 78290 78884 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105710000 18616 1661 17534 35330 28301 28301 1 9606 Homo sapiens -0.010339215734347817 MHNQIPQVTSDGKR Oxidation (M) 1625.7944 0.79438768 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 1 1 8 0 1 33.715 33.71 4 9.7535E-05 6968 20230619_1888_Aki_TMTPro18x_K_F8 100.54 84.6 76185 31925 80488 83614 116010 99155 107270 92771 102750 84241 91995 72061 79020 61527 104730 68756 62399 61376 70264 29725 81934 80293 117170 98912 108470 95017 104460 85255 94260 73403 82189 64225 103510 68695 60105 58377 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63353000 18617 1661 17535 35331 28302;28303 28302 1081 2 9606 Homo sapiens 0.006522262666521783 MHSPQTSAMLFTVDNEAGK Oxidation (M) 2078.9401 0.94012522 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PGB5 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 1 0 6 0 1 49.68 49.757 3 9.0299E-08 13814 20230619_1886_Aki_TMTPro18x_K_F6 115.26 99.869 17616 9654.1 18318 13723 14917 12159 16872 16428 15885 22223 20664 22804 18215 17114 16574 19259 21630 32061 16260 8887.4 18463 13519 15774 12523 16883 16642 16458 22144 20883 22908 18604 17972 17180 20021 20719 30277 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26006000 18618 1637 17536 35332 28304 28304 1065 1 9606 Homo sapiens -0.05618723790075819 MHSPQTSAMLFTVDNEAGK Unmodified 2062.9452 0.9452106 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PGB5 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 7 0 1 52.656 52.726 3 6.3344E-12 14795 20230619_1887_Aki_TMTPro18x_K_F7 136.66 127.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18619 1637 17536 35333 28305 28305 1 9606 Homo sapiens -0.043744199274897255 MHVEHER Oxidation (M) 952.4185 0.41849878 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959;K7EII0 SAFB Scaffold attachment factor B1 yes no 0 1 0 1.5 0.5 1 1 22.889 22.923 3 0.0047417 3712 20230619_1881_Aki_TMTPro18x_K_F2 102.71 63.171 6181.8 0 6071.1 6705.6 12882 7874.8 8727.8 9251.4 9083.7 6968.9 10833 10601 7359 8257.4 6516.3 2589.9 6695 9233.6 5679.6 0 6274.9 6221.8 12679 7906.1 9051.6 9293.4 9294 7275.2 10876 10506 7590.4 8294.2 6629.8 3080.7 6421.6 8690.4 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3474500 18620 2020 17537 35334;35335 28306 28306 1266 1 9606 Homo sapiens -0.05961373333684605 MHVEHER Unmodified 936.42358 0.42358415 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959;K7EII0 SAFB Scaffold attachment factor B1 yes no 0 0 0 2 0 1 23 23.071 3 0.012301 3766 20230619_1881_Aki_TMTPro18x_K_F2 89.142 60.63 82369 64533 119110 111500 142050 142540 127890 153290 121260 107230 152630 161190 120120 113550 143130 83691 183670 129800 76426 59455 118220 109120 145090 141960 129690 154540 125050 112410 153810 159480 124820 117090 147010 87384 174970 122990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20682000 18621 2020 17537 35336 28307 28307 1 9606 Homo sapiens -0.04717069471075774 MHVPAPK Oxidation (M) 794.41089 0.4108942 2320 B2RDN4;Q14137;A8K3R2;B4DEN9;Q14137-2;Q4G0D9;Q6DKJ9 BOP1 Ribosome biogenesis protein BOP1 yes no 0 1 0 8 0 1 32.063 32.068 3 0.055629 6306 20230619_1888_Aki_TMTPro18x_K_F8 50.039 35.522 24861 9163.3 22833 26183 33425 31229 32714 29249 34854 28493 36168 34323 28332 25317 28572 32114 30814 28525 22894 8556.8 23540 25070 33818 31130 33075 30008 35405 29021 36692 34289 29184 26752 29194 31955 29445 27140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25407000 18622 2320 17538 35337 28308 28308 1427 1 9606 Homo sapiens 0.005465191366852196 MIAGQVLDINLAAEPK Oxidation (M) 1697.9022 0.9022068 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;P07910-4;D3DPI2;G3V5X6;G3V3K6;G3V251;G3V575;G3V555;B4DSU6;B4DMJ1 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 1 0 7.5 0.5 1 1 61.477 61.511 3 2.7151E-08 18443 20230619_1887_Aki_TMTPro18x_K_F7 130.06 50.031 341140 270210 297190 354960 367130 362900 360480 347080 372480 369790 394470 399500 386320 354640 403890 439910 376170 452500 315040 248100 306900 351500 375350 366100 364220 356400 379750 373400 403490 402820 395500 371700 409110 441300 360710 429370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4628100000 18623 2226 17539 35338;35339 28309;28310 28309 1386 2 9606 Homo sapiens 0.08117178077395693 MIAGQVLDINLAAEPK Unmodified 1681.9073 0.90729217 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;P07910-4;D3DPI2;G3V5X6;G3V3K6;G3V251;G3V575;G3V555;B4DSU6;B4DMJ1 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 0 7.33 0.471 2 1 62.691 62.723 2;3 1.3536E-18 19057 20230619_1887_Aki_TMTPro18x_K_F7 232.6 209.17 729470 633580 686970 780480 663050 846540 793620 777930 809710 925680 855950 938890 997750 842460 918440 1016700 965900 1067900 674460 581160 701770 776890 694980 849190 793260 803520 826680 927820 882960 949000 1010000 881580 938510 1021400 924420 1013400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3753499999.9999995 18624 2226 17539 35340;35341;35342 28311;28312 28311 2 9606 Homo sapiens 0.09361481940027261 MIAILTENYGGK Unmodified 1308.6748 0.67477304 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 1.5 0.5 1 1 62.505 62.509 3 5.4317E-10 19731 20230619_1881_Aki_TMTPro18x_K_F2 183.33 167.95 159880 101310 132420 143780 108490 226490 156120 172000 242130 245750 223810 298030 299070 279040 231840 321280 306850 459400 147410 93192 136650 142690 116950 221150 157320 181330 241200 246110 234220 299330 299920 290810 241620 329550 293920 434320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 266030000 18625 2326 17540 35343;35344 28313 28313 1 9606 Homo sapiens 0.0327826466004808 MIAILTENYGGK Oxidation (M) 1324.6697 0.66968766 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 1 0 8 0 1 56.027 56.089 3 0.00010073 16210 20230619_1888_Aki_TMTPro18x_K_F8 107.03 92.15 65417 49163 61972 68898 64247 75436 70873 72552 84945 74956 82980 72131 93762 77284 79175 101450 84750 117420 60432 45182 63323 68021 66792 75688 71520 74378 85636 75578 85618 73642 94644 80883 81212 102360 81261 111230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60077000 18626 2326 17540 35345 28314 28314 1435 1 9606 Homo sapiens 0.02033960797416512 MIAPEGSLVFHEK Oxidation (M) 1472.7334 0.73335055 3601 P48739;P48739-2;P48739-3;B3KYB6;B3KYB7 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 1 0 6 0 1 49.16 49.238 3 2.3147E-08 13558 20230619_1886_Aki_TMTPro18x_K_F6 162.48 110.48 118440 107880 105560 108250 137600 123220 115090 123370 134300 132450 134730 124920 146060 111870 119870 150090 131860 139050 109500 98752 108750 109570 139620 123610 117980 126220 135830 133140 138620 126800 147380 117900 123190 149500 126100 132160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 272660000 18627 3601 17541 35346 28315 28315 2269 1 9606 Homo sapiens 0.015893212345190477 MIAPEGSLVFHEK Unmodified 1456.7384 0.73843593 3601 P48739;P48739-2;P48739-3;B3KYB6;B3KYB7 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 0 0 7 0 1 53.061 53.131 3 3.3041E-06 14993 20230619_1887_Aki_TMTPro18x_K_F7 132.86 96.01 519180 369020 494770 419720 448920 501240 501640 544610 529690 525070 527600 490680 513820 482740 440810 530840 542780 600580 479490 338490 503480 421180 471410 501700 503940 552550 538030 530580 540520 499600 521780 500750 455680 536310 518750 569480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 350650000 18628 3601 17541 35347 28316 28316 1 9606 Homo sapiens 0.02833625097150616 MIASDSHRPEVK Oxidation (M) 1384.6769 0.67689831 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8;Q9NYF8-4;E9PJA7 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 1 1 5.5 0.5 1 1 32.781 32.841 4 0.00079081 6843 20230619_1886_Aki_TMTPro18x_K_F6 102.66 68.786 44931 33805 47116 54305 63748 59011 52941 62171 54101 53361 66480 68181 54047 51537 54371 55287 70798 70109 41542 31120 47956 53189 64506 59385 54084 63041 55538 54822 67097 67976 55620 53896 56193 56327 67576 66435 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40258000 18629 4629 17542 35348;35349 28317 28317 2833 1 9606 Homo sapiens -5.306602156451845E-05 MIAVCQNVALSAEDK Unmodified 1647.796 0.79602716 2463 B4DEH0;Q7Z7H8;Q7Z7H8-2 MRPL10 39S ribosomal protein L10, mitochondrial yes no 0 0 0 6.5 0.5 1 1 56.138 56.205 3 0.00075271 16252 20230619_1887_Aki_TMTPro18x_K_F7 79.81 66.148 37055 31077 39045 38006 33032 43201 44436 39425 41825 51874 51726 46804 54523 43402 47084 57353 56745 62350 34284 28507 39415 37887 35121 43191 44069 40878 43192 51590 52694 47654 55188 45653 48601 57652 54239 59147 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98416000 18630 2463 17543 35350;35351 28318 28318 1 9606 Homo sapiens -0.00195900759581491 MIDAGDALIYMEPEK Oxidation (M) 1710.7845 0.78445943 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;A0A6I8PIP7;A0A6I8PTV8 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 1 0 4 0 1 61.179 61.182 3 0.00036837 18802 20230619_1883_Aki_TMTPro18x_K_F4 90.707 80.073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18631 1603 17544 35352 28319 28319 1046 1 9606 Homo sapiens -0.042501425735963494 MIDLIIPR Unmodified 969.56812 0.56812313 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 2 0.816 1 1 1 62.678 62.691 2 0.0024416 19825 20230619_1881_Aki_TMTPro18x_K_F2 126.67 74.979 269900 228160 256160 262240 210290 282550 270450 269650 288230 313790 301890 298160 344810 269830 292070 345320 353190 366560 249510 209160 260770 262370 224090 283800 269860 277540 293350 314240 310940 302490 347940 283450 301590 346800 337430 347880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 282050000 18632 3654 17545 35353;35354;35355 28320;28321 28320 2 9606 Homo sapiens 0.08212178956193839 MIDLSGNPVLR Oxidation (M) 1229.6438 0.64380726 2027 H3BUR9;B3KSW0;Q53HA5;A8K3L7;B3KY94;O14735-3;O14735 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase yes no 0 1 0 8 0 1 52.435 52.512 2 0.00077061 14618 20230619_1888_Aki_TMTPro18x_K_F8 103.88 67.693 135480 105830 134970 169250 136800 170400 163960 157730 158510 173200 195700 204620 198640 176030 171750 221230 214820 253620 125230 97400 137430 165580 142780 171800 163600 162510 163310 175130 199230 205380 201430 184920 177790 223230 205390 240410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77186000 18633 2027 17546 35356 28322 28322 1270 1 9606 Homo sapiens 0.03817111345824742 MIDMPVER Unmodified 989.46742 0.4674228 2826 Q15287;D3DU92;H3BTC0;H3BMM9;H3BV80;Q15287-2;Q15287-3;H3BPG5;A0A024R9P1;H3BMS0 RNPS1;hCG_2026745 RNA-binding protein with serine-rich domain 1 yes no 0 0 0 4 0 1 49.069 49.107 2 0.028729 13545 20230619_1883_Aki_TMTPro18x_K_F4 81.215 63.921 248250 197700 226800 243600 207360 269650 262960 260160 287790 282080 290560 298260 332070 268330 300530 311520 325600 307630 229340 181400 232060 242590 218780 270370 262710 267030 291920 284410 299880 301040 336010 280120 307590 312140 311160 292290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161520000 18634 2826 17547 35357 28323 28323 1 9606 Homo sapiens -0.027732210889553244 MIDVDSLTDK Unmodified 1135.5431 0.54309017 4578 Q9NQW7-4;Q9NQW7-3;Q5T6H7;B3KSI7;Q9NQW7-2;Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 4 0 1 58.39 58.392 2 0.00040342 17668 20230619_1883_Aki_TMTPro18x_K_F4 142.92 108.67 44432 37519 43822 44464 33612 42352 46303 49644 56447 57535 50723 61641 65259 53448 51422 72363 66573 72994 41088 34406 44425 44328 36116 43147 46281 50416 56736 57836 53012 62096 65492 56413 53486 72380 63594 69300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48319000 18635 4578 17548 35358 28324 28324 1 9606 Homo sapiens -0.019259654276993388 MIEAVDNNLRPK Unmodified 1398.7289 0.72893388 1714 A0A7P0TBI1;A0A7P0TBC5;Q4KMQ2-3;Q4KMQ2;Q4KMQ2-2 ANO6 Anoctamin-6 yes no 0 0 1 8 0 1 49.64 49.712 3 0.0014593 13403 20230619_1888_Aki_TMTPro18x_K_F8 87.573 60.244 99982 79867 88841 106850 96679 102790 128400 122640 139350 120790 118900 125680 134130 105550 129370 138180 140760 142160 92352 73344 91425 105630 100630 104690 127900 123890 140480 122330 123700 126700 136150 111320 132310 138530 134580 134970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154470000 18636 1714 17549 35359 28325 28325 1 9606 Homo sapiens 0.04551856811599464 MIEAVQNHIGSLNWGYR Unmodified 1986.9734 0.97341468 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7;E9PKD3 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 0 5 0 1 60.888 60.938 3 1.8770999999999998E-65 18285 20230619_1885_Aki_TMTPro18x_K_F5 239.58 175.82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18637 682 17550 35360 28326 28326 1 9606 Homo sapiens 0.019406908347718854 MIEEAGAIISTR Unmodified 1289.6649 0.66493664 3205 O00154-4;O00154-6;O00154-7;O00154;O00154-5;K7EKP8;O00154-2;O00154-3;B7Z957 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 5 0.816 1 1 1 58.058 58.101 3 6.386999999999999E-19 17335 20230619_1886_Aki_TMTPro18x_K_F6 199.12 165.36 81144 73407 78855 79694 88645 105750 94986 92246 100310 110030 105940 100820 105670 92579 98691 119580 108540 109270 75063 67244 80463 80332 91529 104650 95572 95621 102180 109970 108390 102520 107550 97181 101140 119090 103760 103890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 191130000 18638 3205 17551 35361;35362;35363 28327;28328 28328 2 9606 Homo sapiens 0.031690766546716986 MIEVVCNDR Unmodified 1134.5162 0.51616391 436 B2R4N3;A0A024R7B0;Q9BZL1;K7EQ43 UBL5 Ubiquitin-like protein 5 yes no 0 0 0 4 0 1 46.972 47.014 2 0.0098881 12603 20230619_1883_Aki_TMTPro18x_K_F4 96.668 77.574 140830 110830 145370 146450 149330 171170 168260 175310 197420 189890 181090 155910 200910 167390 142670 212610 204290 173900 130230 101770 147380 145300 155360 171260 169480 179120 198870 190130 187190 160370 201700 174670 149880 210560 194650 165700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115470000 18639 436 17552 35364 28329 28329 1 9606 Homo sapiens -0.04571352519883476 MIEYDPERR Unmodified 1207.5656 0.56555694 1807 O60832;A0A8Q3WLC8;A0A8Q3SIY6;A0A8Q3SIS9;A0A8Q3SJE8;A0A8Q3WLD1;A0A8Q3WLG7;A0A8Q3SIX2;C9IYT0;O60832-2;A0A8Q3WLE4;U5UA77;A0A8Q3WLW8;A0A8V8TKY9 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 0 0 1 3.5 0.5 1 1 40.629 40.679 3 0.00036893 9881 20230619_1882_Aki_TMTPro18x_K_F3 118.71 84.325 1007700 365660 775130 903260 1083900 827220 1007300 1010100 1277400 1213400 1324100 1242600 1412000 1160300 1045000 1469000 1340300 1328500 926770 340450 811700 866120 1097500 846480 1028200 1024700 1288000 1216400 1359000 1258100 1420800 1215900 1087700 1462100 1279500 1263300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123330000 18640 1807 17553 35365;35366 28330 28330 1 9606 Homo sapiens -0.029923212394123766 MIFDVESMK Oxidation (M) 1114.5039 0.50386789 261 A0A024R3T8;P09874;B4E0E1;B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 1 0 5.5 0.5 1 1 57.855 57.919 3 0.00063103 17242 20230619_1886_Aki_TMTPro18x_K_F6 102.07 54.244 44929 37364 41798 45448 43157 51894 41649 44794 61527 50061 48896 56361 59532 49198 51764 70481 52655 60594 41525 34273 42761 45314 44761 51816 42703 46391 61042 50537 51271 56703 60050 52095 52932 69874 50426 57628 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63429000 18641 261 17554 35367;35368 28331 28331 155 1 9606 Homo sapiens -0.0488038898290597 MIFIPSSIAFLTTLER Unmodified 1838.0012 0.001192559 2846 D6RCD0;Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes no 0 0 0 6 0 1 67.179 67.223 3 0.08693 21247 20230619_1886_Aki_TMTPro18x_K_F6 36.029 21.338 3188 2922.2 2269.6 2533.6 2816.6 2570.5 1834.3 2767.3 2070 2706.6 3063.3 3113.6 2349.2 3022 4564.9 3876.8 2525.9 2628.8 2943 2671.9 2389.8 2594.1 2855 2605.1 1918.6 2809.5 2138.1 2749 3069.7 3141.9 2530.1 3158 4487 3815.3 2437.2 2509.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2576100 18642 2846 17555 35369 28332 28332 1 9606 Homo sapiens 0.11571201042283974 MIFVGIK Oxidation (M) 822.46735 0.46734645 2752 C9JFR7;G4XXL9;P99999;Q6LER6 CYCS Cytochrome c yes no 0 1 0 3 0 1 55.16 55.201 3 0.0078501 16428 20230619_1882_Aki_TMTPro18x_K_F3 88.591 49.048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18643 2752 17556 35370 28333 28333 1645 1 9606 Homo sapiens 0.04901146973361392 MIFVGIK Unmodified 806.47243 0.47243183 2752 C9JFR7;G4XXL9;P99999;Q6LER6 CYCS Cytochrome c yes no 0 0 0 4.5 0.5 1 1 60.919 60.969 2 9.0636E-05 18731 20230619_1883_Aki_TMTPro18x_K_F4 140.79 73.735 488690 370510 396760 435030 377600 551230 558350 524700 521870 260500 186910 132260 209040 165470 406810 263760 220930 203560 450970 339870 410920 435600 399640 547540 550960 530780 519560 273990 208720 141760 221980 174900 399140 260550 213060 194040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 614060000 18644 2752 17556 35371;35372 28334;28335 28334 2 9606 Homo sapiens 0.06145450835970223 MIGFSETAK Unmodified 982.47937 0.4793677 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;Q96D47;D3DXJ4;I3L2G1 NSF Vesicle-fusing ATPase yes no 0 0 0 7 0 1 51.926 52 3 0.016831 14477 20230619_1887_Aki_TMTPro18x_K_F7 59.35 31.608 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18645 1435 17557 35373 28336 28336 1 9606 Homo sapiens -0.012572810741289686 MIGGPILPSER Oxidation (M) 1184.6223 0.62234354 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GW82;A0A1B0GUA1;A0A1B0GTJ4;A0A1B0GV49;A0A0J9YWF7;A0A1B0GUY0;H0YHM6;F8VVF2;A0A1B0GVU0 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 1 0 6.5 0.5 1 1 47.662 47.747 2 0.045199 12928 20230619_1886_Aki_TMTPro18x_K_F6 63.076 41.148 116050 95788 114350 121920 140030 144060 133600 125430 144190 145170 152040 148400 148070 140180 147650 152750 152730 169350 107300 87909 116720 121250 143160 143590 135400 129980 146650 145780 155450 150240 151320 145500 150470 154220 146200 160620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 297480000 18646 1415 17558 35374;35375 28337 28337 880 1 9606 Homo sapiens 0.03741726317116445 MIGGPILPSER Unmodified 1168.6274 0.62742892 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GW82;A0A1B0GUA1;A0A1B0GTJ4;A0A1B0GV49;A0A0J9YWF7;A0A1B0GUY0;H0YHM6;F8VVF2;A0A1B0GVU0 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 8 0 1 52.82 52.894 2 0.0038844 14834 20230619_1888_Aki_TMTPro18x_K_F8 111.06 73.967 247490 221020 227900 240790 175640 261780 241530 229190 256130 303740 279120 339860 301900 287900 283350 311610 326910 377200 228830 202480 232520 241890 188920 262300 240230 238470 261280 304000 286740 341280 306760 299890 291030 316360 312710 357390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 377970000 18647 1415 17558 35376 28338 28338 1 9606 Homo sapiens 0.04986030179725276 MIGQATAADQEK Oxidation (M) 1277.5922 0.59216562 3830 Q6FGF7;Q13015 AF1Q;MLLT11 Protein AF1q yes no 0 1 0 3.5 0.5 1 1 39.519 39.567 3 6.0197E-05 9408 20230619_1882_Aki_TMTPro18x_K_F3 113.99 91.102 54125 49803 62359 57873 70023 69248 76576 60437 69176 60781 61966 50305 66835 46840 88289 50114 57293 47829 50150 45647 62751 57951 72176 68992 76564 62400 70598 61117 64122 51449 68971 48661 87472 50313 55052 45487 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92558000 18648 3830 17559 35377;35378 28339 28339 2510 1 9606 Homo sapiens -0.035526771387594636 MIGQATAADQEK Unmodified 1261.5973 0.597251 3830 Q6FGF7;Q13015 AF1Q;MLLT11 Protein AF1q yes no 0 0 0 3.5 0.5 1 1 44.093 44.15 3 1.8283E-05 11339 20230619_1883_Aki_TMTPro18x_K_F4 126.12 112.21 141670 116520 125200 158740 167230 194980 176120 160990 215420 222800 274010 346870 371030 303580 160340 198270 329480 454100 130870 107010 129430 157200 170780 193580 178230 168570 219640 225680 282800 344520 365570 309420 176300 215110 314470 428130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 241670000 18649 3830 17559 35379;35380 28340 28340 1 9606 Homo sapiens -0.023083732761506326 MIHENLR Oxidation (M) 927.45964 0.45963531 2489 B4E1X5;B4DUV5;B4DJ73;B4DVN9;B4DHL5;B4E228;Q6NW34-2;Q6NW34 C3orf17 Uncharacterized protein C3orf17 yes no 0 1 0 5 0 1 29.792 29.868 3 0.056252 5640 20230619_1885_Aki_TMTPro18x_K_F5 54.549 35.819 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18650 2489 17560 35381 28341 28341 1522 1 9606 Homo sapiens -0.006996122942268812 MIHENLR Unmodified 911.46472 0.46472069 2489 B4E1X5;B4DUV5;B4DJ73;B4DVN9;B4DHL5;B4E228;Q6NW34-2;Q6NW34 C3orf17 Uncharacterized protein C3orf17 yes no 0 0 0 6 0 1 34.249 34.296 3 0.034786 7363 20230619_1886_Aki_TMTPro18x_K_F6 72.138 56.995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18651 2489 17560 35382 28342 28342 1 9606 Homo sapiens 0.005446915683819498 MIHGNPSGVDNAVSTWGGALR Unmodified 2138.0327 0.032720472 2323 F5H8H2;B7Z301;B2RDU6;Q59ET9;Q03426;A0A1B0GWC2;B7Z1C2;A0A8V8TMD0 MVK Mevalonate kinase yes no 0 0 0 2 0 1 53.449 53.477 3 6.1709E-12 15967 20230619_1881_Aki_TMTPro18x_K_F2 138.82 128.03 132240 90547 114940 116470 79168 117540 110770 114420 48863 143520 158570 193310 204950 185570 157970 219470 176390 195300 122020 83171 117700 115520 86034 118620 108140 117920 58022 144800 159810 193720 205490 193320 162820 218490 168720 185680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36899000 18652 2323 17561 35383 28343 28343 1 9606 Homo sapiens 0.009225420582879451 MIIEEAK Unmodified 832.43644 0.43644025 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 4 0.816 1 1 1 49.478 49.541 2 0.024608 13766 20230619_1883_Aki_TMTPro18x_K_F4 104.45 27.601 764670 567750 634120 783300 677840 825200 701410 721450 990720 966410 1029600 1215500 1233100 1096600 749480 1545200 1535500 1573500 705660 521710 656610 773420 702760 828590 714900 750970 994690 971460 1063900 1219000 1230400 1158500 818410 1544500 1461800 1494100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 363830000 18653 2633 17562 35384;35385;35386 28344;28345 28345 2 9606 Homo sapiens 0.01351948868443742 MIIEEAK Oxidation (M) 848.43135 0.43135487 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 1 0 4 0 1 44.502 44.546 3 0.012291 11516 20230619_1883_Aki_TMTPro18x_K_F4 81.635 30.062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18654 2633 17562 35387 28346 28346 1586 1 9606 Homo sapiens 0.00107645005834911 MIIPSLEELDSLK Unmodified 1486.7953 0.79528211 2039 A8K4B4;Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YKA7 NUSAP1 Nucleolar and spindle-associated protein 1 yes no 0 0 0 7 0 1 64.751 64.778 3 0.00024307 20017 20230619_1887_Aki_TMTPro18x_K_F7 95.401 53.4 60699 55892 57144 58908 41839 56220 55950 56095 62324 72666 70713 59636 73640 64823 62903 75340 74085 75164 56144 51183 58134 59242 45140 57058 55828 57760 63510 72150 72202 61350 74572 67261 64839 75496 70784 71389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16932000 18655 2039 17563 35388 28347 28347 1 9606 Homo sapiens 0.0713562786302191 MILELFSK Unmodified 979.54124 0.54123967 2269 V9HWG9;B2R983;P78417;Q5TA02;P78417-3;P78417-2;Q5TA01 HEL-S-21;GSTO1 Glutathione S-transferase omega-1 yes no 0 0 0 3.5 0.5 1 1 64.607 64.628 2 0.00070706 20396 20230619_1882_Aki_TMTPro18x_K_F3 170.66 59.386 189470 132570 157870 172180 138740 184020 186430 192380 191050 220860 203100 191380 229940 181550 195140 253970 246990 254680 174790 121770 162850 170780 147200 185270 185400 196670 195030 220710 208910 195410 232140 191550 202230 253890 235870 241860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163070000 18656 2269 17564 35389;35390 28348 28348 1 9606 Homo sapiens 0.05065070345028744 MILIQDGSQNTNVDK Oxidation (M) 1690.8196 0.81959938 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5;M0QYH3 KHSRP Far upstream element-binding protein 2 yes no 0 1 0 4.5 0.5 1 1 48.81 48.867 3 1.2937E-05 13262 20230619_1885_Aki_TMTPro18x_K_F5 107.74 86.996 60800 52870 58024 67165 56521 58968 64216 69433 93242 77293 79516 103250 114690 98211 67086 136410 122770 156080 56221 48510 59202 66552 59065 60502 65203 70434 92787 78521 83864 103510 113750 103510 72522 137320 117150 147910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137340000 18657 3197 17565 35391;35392 28349;28350 28349 1877 2 9606 Homo sapiens 0.0018223627857878455 MILIQDGSQNTNVDK Unmodified 1674.8247 0.82468476 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5;M0QYH3 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 6 0 1 54.317 54.394 3 9.142E-08 15754 20230619_1886_Aki_TMTPro18x_K_F6 131.66 111.92 88166 76728 76738 81210 76841 90716 83026 86547 125070 104490 93384 116100 153630 129100 78056 176600 173250 207050 81470 70279 78935 81807 80131 90937 84642 89175 123810 105090 99990 117850 151410 135320 86506 178050 165080 196210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 495470000 18658 3197 17565 35393 28351 28351 1 9606 Homo sapiens 0.014265401411876155 MILIQDGSQNTNVDKPLR Unmodified 2041.0626 0.062623617 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5;M0QYH3 KHSRP Far upstream element-binding protein 2 yes no 0 0 1 1 0 1 52.762 52.762 3 2.1095999999999998E-19 15506 20230619_1880_Aki_TMTPro18x_K_F1 191.93 181.79 80049 75805 99251 93489 67494 91953 106650 97742 89268 109910 116800 88088 82990 62820 122750 54116 61805 40423 74239 69513 98751 92979 73681 93193 104780 99798 93031 109680 116950 89524 87501 65205 120380 54015 59576 38618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 447270000 18659 3197 17566 35394 28352 28352 1 9606 Homo sapiens 0.08373481003604866 MILIQDGSQNTNVDKPLR Oxidation (M) 2057.0575 0.057538239 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5;M0QYH3 KHSRP Far upstream element-binding protein 2 yes no 0 1 1 7.67 0.471 1 2 48.239 48.311 3;4 1.8796E-23 12788 20230619_1888_Aki_TMTPro18x_K_F8 194.94 174.19 155490 136780 159450 174610 187070 170340 194740 189410 165070 187140 206510 147710 142060 106480 224630 102610 107060 76769 143880 125510 162120 173190 191910 173100 195040 192130 171540 187910 206890 150380 150670 111050 219800 102180 103360 73301 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 216320000 18660 3197 17566 35395;35396;35397 28353;28354;28355 28355 1877 3 9606 Homo sapiens 0.07129177140996035 MIMQDKLEK Unmodified 1134.5777 0.57770153 3544;769;1249 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8;A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72;Q53ZP9;A0A140VKE7;B4DZR0;O95757;E9PDE8;B4DXT2 HSPA4;HEL-S-5a;HSPH1;HSPA4L Heat shock 70 kDa protein 4;Heat shock protein 105 kDa;Heat shock 70 kDa protein 4L no no 0 0 1 8 0 1 49.853 49.926 3 0.0022919 13501 20230619_1888_Aki_TMTPro18x_K_F8 92.428 57.647 157050 165850 182470 154250 155120 145400 179490 158920 115000 148700 140930 69762 93927 63601 180180 75504 68184 44841 145680 151660 182630 156850 163470 148220 177680 161190 121970 148300 141050 74340 101180 66547 174940 74331 66159 43000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141540000 18661 3544;769;1249 17567 35398 28356 28356 1 9606 Homo sapiens 0.015795791794062097 MINTDLSR Oxidation (M) 964.46478 0.46478027 3558 Q59GY2;P36578;B4DMJ6;H3BM89;B4DMJ2 RPL4 60S ribosomal protein L4 yes no 0 1 0 5.25 0.829 1 1 2 38.896 38.973 2 0.0058413 8999 20230619_1885_Aki_TMTPro18x_K_F5 106.94 49.659 415550 311090 363330 386210 463590 458080 458950 451980 492670 353910 376150 338810 391280 284600 415260 427390 426540 337110 383640 285530 375030 384830 473150 457720 463940 459520 495010 362670 391980 343250 399760 303000 422500 422130 407380 321470 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 841020000 18662 3558 17568 35399;35400;35401;35402 28357;28358;28359 28358 2220 3 9606 Homo sapiens -0.018873532222642098 MINTDLSR Unmodified 948.46987 0.46986564 3558 Q59GY2;P36578;B4DMJ6;H3BM89;B4DMJ2 RPL4 60S ribosomal protein L4 yes no 0 0 0 6.5 0.5 1 1 44.072 44.159 2 7.0195E-07 11288 20230619_1886_Aki_TMTPro18x_K_F6 205.77 116.22 776340 676740 702230 700920 812640 916060 866350 798620 948330 594100 561920 462490 624910 468440 544340 714180 747450 522020 717590 619750 721260 709030 837130 907490 872480 818540 945180 608210 596860 476670 632010 496130 566990 702470 711630 498680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1081300000 18663 3558 17568 35403;35404 28360;28361 28360 2 9606 Homo sapiens -0.006430493596553788 MIPCDFLIPVQTQHPIR Oxidation (M) 2080.0598 0.059786845 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;B4DVJ0;K7EQ48;K7ESF4 GPI Glucose-6-phosphate isomerase yes no 0 1 0 2.5 0.5 1 1 57.54 57.563 3 2.8389E-06 17447 20230619_1882_Aki_TMTPro18x_K_F3 100.41 83.471 56020 53493 56393 69415 52316 63308 63155 62509 74422 63061 64206 69586 72688 57881 65242 71379 64460 74179 51857 49078 57281 68691 55007 64446 63398 63962 74746 63917 66765 69943 73535 60825 66468 71653 61749 70390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113800000 18664 1326 17569 35405;35406 28362;28363 28363 831 2 9606 Homo sapiens 0.06295934345143905 MIPICPVVSFTYVPSR Acetyl (Protein N-term);Oxidation (M) 1922.9634 0.96342684 2331 B2RNR6;Q96KR1;Q05D65 ZFR Zinc finger RNA-binding protein yes no 1 1 0 3 0 1 65.555 65.589 2 0.040394 20793 20230619_1882_Aki_TMTPro18x_K_F3 42.789 28.098 2657.6 1672.3 1594.7 2542.4 1623.6 1464.7 1562.2 2461.9 2959 2181.6 2779.5 2055.5 2447.6 2012.8 3895.2 2077.4 2361.3 3816.9 2445.7 1539.6 1713.4 2480.7 1685.9 1585.8 1624 2437.4 2924.3 2216.5 2843.1 2093.9 2575.1 2085.1 3841.3 2188.8 2284.2 3601.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9087400 18665 2331 17570 35407 28364 28364 1440 1 9606 Homo sapiens 0.038863667851501305 MIPICPVVSFTYVPSR Acetyl (Protein N-term) 1906.9685 0.96851222 2331 B2RNR6;Q96KR1;Q05D65 ZFR Zinc finger RNA-binding protein yes no 1 0 0 4 0 1 67.55 67.563 2 2.0912E-05 21416 20230619_1883_Aki_TMTPro18x_K_F4 92.925 76.672 0 0 0 0 1181.1 954.68 0 941.79 0 0 0 766.3 0 0 1376.9 0 0 0 0 0 0 0 1099.2 892.76 0 933.88 0 0 0 714.51 0 0 1292.3 0 0 0 0 0 0 0 1 1 0 1 0 0 0 1 0 0 1 0 0 0 3062100 18666 2331 17570 35408 28365 28365 1 9606 Homo sapiens 0.05130670647781699 MIQDGKGDVTITNDGATILK Oxidation (M) 2105.0674 0.067434223 3622 P50991;A8K3C3;B7Z9L0;B7Z2Z8 CCT4 T-complex protein 1 subunit delta yes no 0 1 1 7 0 1 52.913 52.984 3 6.2879E-06 14908 20230619_1887_Aki_TMTPro18x_K_F7 91.64 70.826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18667 3622 17571 35409 28366 28366 2309 1 9606 Homo sapiens 0.05910320355769727 MIQQEHER Unmodified 1069.4975 0.49747738 921 K7EP11;F5H0Q6;B3KSZ8;A0A0A0MQS2;Q8N2M8-4;Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein yes no 0 0 0 2 0 1 28.167 28.242 3 0.0016415 5068 20230619_1881_Aki_TMTPro18x_K_F2 112.41 84.012 10182 7762.5 11627 13740 16015 22472 14577 18162 23812 18307 20507 18359 16771 17065 15098 13462 25118 21248 9422.1 7155 11777 13481 16302 21936 15068 18836 23582 18513 21010 18586 17188 17458 15923 14029 23909 20114 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8898000 18668 921 17572 35410 28367 28367 1 9606 Homo sapiens -0.03449146099410427 MISAAQLLDELMGR Acetyl (Protein N-term);Oxidation (M) 1604.7902 0.79021351 3127 Q86Y74;J3KPP4;O95232;Q6PKC2;A8K3C5;D6RDI2;C9JL41;O95232-2;E7EN55 CROP;LUC7L3 Luc7-like protein 3 yes no 1 1 0 6 0.816 1 1 1 68.712 68.748 2 8.0643E-09 21637 20230619_1885_Aki_TMTPro18x_K_F5 92.611 81.1 3864.6 3949.2 5072.7 2162.4 3954.5 5027.7 4042.2 4556.5 5354.1 4169 3623.8 4009.3 4510.4 3089.1 3962.6 3576.4 3166 4728.9 3588.3 3600.3 5018.3 2243 4202.8 4859.5 4114.9 4670.5 5310.5 4231.2 3840.8 4043.3 4543.3 3248.6 3993.5 3651.5 3047.7 4473.6 2 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12027000 18669 3127 17573 35411;35412;35413 28368;28369 28368 1815 2 9606 Homo sapiens 0.012010007287244662 MISAAQLLDELMGR Acetyl (Protein N-term) 1588.7953 0.79529888 3127 Q86Y74;J3KPP4;O95232;Q6PKC2;A8K3C5;D6RDI2;C9JL41;O95232-2;E7EN55 CROP;LUC7L3 Luc7-like protein 3 yes no 1 0 0 7 0 1 71.366 71.383 2 1.4796E-11 22569 20230619_1887_Aki_TMTPro18x_K_F7 115.18 98.504 1096.4 0 2289.4 1959.3 1298.9 1292.1 1810.7 1120.1 1527.3 0 1413.1 0 2014.5 0 1157.1 1845.6 1566.2 1320.1 1016.6 0 2209.3 1805 1435.7 1349.4 1787.8 1130.8 1559.3 0 1471.2 0 1984.8 0 1218 1792.1 1492.9 1260.3 1 0 1 1 1 1 1 1 1 0 1 0 1 0 1 1 1 1 1647500 18670 3127 17573 35414 28370 28370 1 9606 Homo sapiens 0.02445304591333297 MISDAIPELK Oxidation (M) 1131.5846 0.58456105 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 1 0 5.33 0.471 2 1 56.054 56.123 2;3 0.00080484 16466 20230619_1886_Aki_TMTPro18x_K_F6 113.1 86.712 113360 91695 100600 124590 125350 118120 117530 121680 132910 140280 147700 149440 138690 132260 147760 163830 147480 170490 104710 84217 103740 122980 127920 120060 119460 124580 135180 141030 150490 150730 142360 138610 150180 164450 141270 161780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357030000 18671 297 17574 35415;35416;35417 28371;28372 28372 184 2 9606 Homo sapiens 0.024032153316056792 MISDAIPELK Unmodified 1115.5896 0.58964643 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 6.5 0.5 2 2 60.244 60.295 2;3 0.00019562 17893 20230619_1887_Aki_TMTPro18x_K_F7 118.71 81.367 239590 207820 235140 260550 207160 268830 269900 259000 291960 312930 314610 335910 355810 314800 333160 353860 358330 403570 221590 190660 239040 258880 219390 270890 269210 266780 297220 314050 323730 339200 360840 327520 340690 357700 342920 382620 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1096000000 18672 297 17574 35418;35419;35420;35421 28373;28374;28375 28375 3 9606 Homo sapiens 0.036475191942372476 MISGMYLGEIVR Oxidation (M) 1383.689 0.6890429 43;2017 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9;A0A024R7R1;Q59H08;P52790;P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J4Q0;A0A994J428 DKFZp686M1669;HK2;HK3;HK1 Hexokinase;Hexokinase-2;Hexokinase-3;Hexokinase-1 no no 0 1 0 1 0 1 58.874 58.874 3 0.0017438 18056 20230619_1880_Aki_TMTPro18x_K_F1 74.611 60.376 16902 14630 14303 16633 15172 19208 20504 18447 21516 16241 19141 17729 19422 18056 19030 24054 20102 19975 15614 13410 14780 16668 15856 19206 20384 18845 21742 16590 19757 17969 19808 18916 19446 23834 19222 19016 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17883000 18673 2017;43 17575 35422 28376 28376 18 1 9606 Homo sapiens 0.012545938166795167 MITHFER Oxidation (M) 948.44874 0.44873627 1869 B4DN92;A0A994J7M5;A0A994J4W5;A8K285;A8K0M6;H3BTS6;Q8NBN3;A8K369;Q8NBN3-3 TMEM87A Transmembrane protein 87A yes no 0 1 0 5.5 0.5 1 1 33.223 33.284 3 0.027955 6912 20230619_1885_Aki_TMTPro18x_K_F5 66.429 35.14 22235 14807 21041 23674 30320 26276 30943 26028 33186 28303 34967 36790 34606 29377 34099 31118 33678 30883 20527 13637 21626 23200 30717 26375 31211 26687 33731 28748 35794 36704 35301 30631 34642 31247 32208 29346 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12173000 18674 1869 17576 35423;35424 28377 28377 1203 1 9606 Homo sapiens -0.0275501466849164 MITHFER Unmodified 932.45382 0.45382165 1869 B4DN92;A0A994J7M5;A0A994J4W5;A8K285;A8K0M6;H3BTS6;Q8NBN3;A8K369;Q8NBN3-3 TMEM87A Transmembrane protein 87A yes no 0 0 0 6.5 0.5 1 1 38.628 38.701 3 0.0014589 8729 20230619_1887_Aki_TMTPro18x_K_F7 143 73.572 36748 44930 41364 40967 52094 57657 58915 50453 70240 44581 45206 39233 43513 37059 48842 43557 44076 41985 34120 41063 41809 41951 53439 56900 59298 51889 69834 45273 47462 40026 44723 38647 49279 43600 42203 39902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39822000 18675 1869 17576 35425;35426 28378 28378 1 9606 Homo sapiens -0.01510710805882809 MITIDGK Oxidation (M) 792.40514 0.40514012 473 A0A024R7V6;P61019;P61019-2;E9PKL7;H0YD31;A0A1D5RMT4 RAB2;RAB2A Ras-related protein Rab-2A yes no 0 1 0 6 0 1 46.315 46.398 2 0.060756 12324 20230619_1886_Aki_TMTPro18x_K_F6 72.789 48.115 154030 119710 151430 172830 171930 181960 180790 161040 209410 180850 206160 212300 201020 168280 196700 208620 225810 215800 142360 110040 154480 170200 177160 182800 182610 166610 211480 182740 211510 212610 205130 177170 201760 209370 215710 204920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113050000 18676 473 17577 35427 28379 28379 292 1 9606 Homo sapiens 0.0006337583437243666 MITIDGK Unmodified 776.41023 0.4102255 473 A0A024R7V6;P61019;P61019-2;E9PKL7;H0YD31;A0A1D5RMT4 RAB2;RAB2A Ras-related protein Rab-2A yes no 0 0 0 7.5 0.5 1 1 51.338 51.415 2 0.0069009 14216 20230619_1887_Aki_TMTPro18x_K_F7 129.4 79.358 287550 239560 271400 306540 282400 316840 304970 298860 358930 367930 387530 424410 414270 337290 339080 454520 446990 428510 265800 219860 277420 304150 293210 319190 307900 308490 363850 369820 397600 425320 418380 356970 352710 453070 426510 407350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308600000 18677 473 17577 35428;35429 28380 28380 1 9606 Homo sapiens 0.013076796969812676 MITSAAGIISLLDEDEPQLK Unmodified 2143.1082 0.10823641 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491;A0A7I2V4A5;C9J9M4;F8WCE3 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 6.5 0.5 1 1 66.205 66.239 3 2.7557E-37 20829 20230619_1886_Aki_TMTPro18x_K_F6 238.81 221.51 37750 27542 35063 35461 30281 33820 35992 36694 36054 36722 43530 37925 50255 38998 39003 44867 41827 43603 34862 25292 35771 35147 31987 34388 35984 37294 37024 37145 44558 38525 50509 40519 40047 44909 40005 41422 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 99486000 18678 832 17578 35430;35431 28381;28382;28383 28381 3 9606 Homo sapiens 0.08240661675336014 MITTSGPTSEKPTR Oxidation (M) 1520.7505 0.75045718 1856 O43318;O43318-2;O43318-3;O43318-4;Q5U0C9;A0A8V8TR17;Q5U0D0;A0A8V8TQF8;A0A8V8TQF2;B4DRH8;Q9UG54;A0A8V8TQL7 MAP3K7;DKFZp586F0420 Mitogen-activated protein kinase kinase kinase 7 yes no 0 1 1 8 0 1 36.665 36.652 3 7.9376E-05 8153 20230619_1888_Aki_TMTPro18x_K_F8 101.43 70.747 24009 19509 25366 24910 25973 29291 28041 26800 29963 29058 33872 29236 30983 24397 28318 35350 35134 27445 22210 17906 25662 24771 26985 29227 28219 27613 30563 29252 34409 29541 31579 25900 29255 34886 33497 26179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9406000 18679 1856 17579 35432 28384 28384 1183 1 9606 Homo sapiens 0.010911970496863432 MIVDPVEPHGEMK Oxidation (M) 1496.7003 0.70033587 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 1 0 3.33 0.471 2 1 45.596 45.661 3 4.1453E-06 12175 20230619_1883_Aki_TMTPro18x_K_F4 124.51 101.14 163690 139600 156520 178730 176280 203420 199060 189670 210140 219070 232720 220830 225130 195410 207960 246630 241520 259610 151350 128110 160060 177560 182210 203480 199720 195520 214390 219870 237300 223330 229240 205140 213840 247620 230890 246370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 348570000 18680 2263 17580 35433;35434;35435 28385;28386 28386 1408;1409 2 9606 Homo sapiens -0.028146288798552632 MIVDPVEPHGEMK Unmodified 1480.7054 0.70542124 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 3 0 1 48.897 48.975 3 0.0059368 13691 20230619_1882_Aki_TMTPro18x_K_F3 69.602 51.685 103540 93038 109220 114230 93533 112110 114540 107520 125380 122170 118950 115820 142480 114400 121660 119070 114620 126440 95842 85327 110290 113600 99009 113410 114620 110600 126890 122520 123350 117800 143610 118360 123680 120020 109820 119970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86364000 18681 2263 17580 35436 28387 28387 1 9606 Homo sapiens -0.015703250172464323 MIVGTLK Unmodified 760.4517 0.45169638 1929 F2Z2Y6;C9JNV3;A4D0W0;O95777;C9JIZ0 LSM8 U6 snRNA-associated Sm-like protein LSm8 yes no 0 0 0 3 0 1 52.434 52.493 2 0.019039 15251 20230619_1882_Aki_TMTPro18x_K_F3 101.69 24.317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18682 1929 17581 35437 28388 28388 1 9606 Homo sapiens 0.06188860456290968 MIVVLGEIGGTEEYK Unmodified 1636.8382 0.83820956 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 7 0 1 63.546 63.578 3 0.013328 19455 20230619_1887_Aki_TMTPro18x_K_F7 59.248 39.924 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18683 161 17582 35438 28389 28389 1 9606 Homo sapiens 0.04526397920449199 MIYASSK Oxidation (M) 814.38949 0.38949006 3495;3684;4013 V9HWA6;P60981;P60981-2;F6RFD5;B7Z9M9;V9HWI5;P23528;G3V1A4;E9PK25;E9PP50;E9PQB7;Q549N0;Q9Y281;Q9Y281-3 HEL32;DSTN;HEL-S-15;CFL1;CFL2 Destrin;Cofilin-1;Cofilin-2 no no 0 1 0 4.2 2.79 1 1 1 1 1 39.8 39.836 2 0.010726 9177 20230619_1887_Aki_TMTPro18x_K_F7 113.1 77.469 1321000 828390 1181000 1184800 2026400 2688700 764310 1843100 1310300 330600 414870 262980 295650 267860 938090 249440 475490 235870 1218700 762110 1223700 1185700 2009800 2582700 863640 1896400 1266600 414980 462630 272030 336240 275160 913140 252490 457760 225050 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1132300000 18684 3684;3495;4013 17583 35439;35440;35441;35442;35443 28390;28391;28392;28393 28392 2165 4 9606 Homo sapiens -0.025129106826852876 MIYASSK Unmodified 798.39458 0.39457544 3495;3684;4013 V9HWA6;P60981;P60981-2;F6RFD5;B7Z9M9;V9HWI5;P23528;G3V1A4;E9PK25;E9PP50;E9PQB7;Q549N0;Q9Y281;Q9Y281-3 HEL32;DSTN;HEL-S-15;CFL1;CFL2 Destrin;Cofilin-1;Cofilin-2 no no 0 0 0 1.5 0.5 2 2 45.038 45.079 2;3 0.0029973 12339 20230619_1880_Aki_TMTPro18x_K_F1 157.99 105.69 859970 584120 854410 821210 1101000 1327400 973640 994910 1390900 296980 349560 264400 292440 205160 596170 286200 378700 245070 794300 537080 872030 816070 1122400 1295400 1001200 1020400 1348300 338950 405140 268860 314790 218040 587100 285020 363510 233690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 895240000 18685 3684;3495;4013 17583 35444;35445;35446;35447 28394;28395 28394 2 9606 Homo sapiens -0.01268606820065088 MKDTDSEEEIR Unmodified 1351.5926 0.59255956 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;Q9BRL5;A8K1M2;Q96HY3;A0A590UJI2;G3V361;G3V226;A0A590UJC0 CALM3;CALM2;CALM1 yes no 0 0 1 2 0.816 1 1 1 38.027 38.066 3 2.3986E-06 9203 20230619_1880_Aki_TMTPro18x_K_F1 155.88 136.31 1393500 718690 1246100 1429100 1000400 1306400 1323200 1328000 1794200 1905000 1958600 2734100 1614200 1618600 1077000 1799700 1501700 1493600 1284400 664880 1275700 1381900 1070000 1329200 1330400 1371400 1807700 1918400 1990600 2695700 1634600 1713200 1132200 1787000 1432600 1421900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3157899999.9999995 18686 2325 17584 35448;35449;35450 28396;28397;28398 28396 3 9606 Homo sapiens -0.06917302209535592 MKDTDSEEEIR Oxidation (M) 1367.5875 0.58747418 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;Q9BRL5;A8K1M2;Q96HY3;A0A590UJI2;G3V361;G3V226;A0A590UJC0 CALM3;CALM2;CALM1 yes no 0 1 1 1.75 0.829 2 1 1 34.064 34.105 2;3 0.0045498 7217 20230619_1882_Aki_TMTPro18x_K_F3 74.76 62.129 91890 52328 85917 98099 87465 96749 86900 95648 126850 139360 148260 149690 151900 115220 109800 119640 150810 107080 84761 48339 87859 95205 90808 97847 88942 98946 127880 138780 151190 150210 152830 120250 114680 119460 143600 102000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1581199999.9999998 18687 2325 17584 35451;35452;35453;35454 28399;28400 28400 1432 2 9606 Homo sapiens -0.08161606072144423 MKDTDSEEEIREAFR Oxidation (M) 1870.8367 0.83670601 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;Q9BRL5;A8K1M2;Q96HY3;A0A590UJI2;G3V361;G3V226;A0A590UJC0 CALM3;CALM2;CALM1 yes no 0 1 2 3 1.22 1 2 2 2 1 44.193 44.253 3;4 1.5388E-10 11352 20230619_1883_Aki_TMTPro18x_K_F4 154.88 132.73 753300 598310 712410 730980 693570 696690 713920 705640 806100 808990 825930 803950 907090 687740 735550 960740 924270 805480 696110 548940 726750 727030 722090 707620 721800 723210 817100 811840 849720 812830 914650 727840 762590 951730 881690 767130 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4532100000 18688 2325 17585 35455;35456;35457;35458;35459;35460;35461;35462 28401;28402;28403 28403 1432 3 9606 Homo sapiens -0.06387887906271317 MKDTDSEEEIREAFR Unmodified 1854.8418 0.84179138 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;Q9BRL5;A8K1M2;Q96HY3;A0A590UJI2;G3V361;G3V226;A0A590UJC0 CALM3;CALM2;CALM1 yes no 0 0 2 3.6 1.43 1 1 3 2 2 1 47.187 47.248 3;4 3.0217E-10 13167 20230619_1881_Aki_TMTPro18x_K_F2 148.7 134.66 1061800 822150 980330 1004800 738330 915660 934340 1034000 1061300 1266900 1176300 1179100 1310200 1061400 1092800 1455400 1315900 1039600 980880 754390 999160 998910 792440 935270 935500 1054100 1079700 1264600 1207200 1197300 1322400 1119200 1129300 1432000 1255000 992790 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 5304800000 18689 2325 17585 35463;35464;35465;35466;35467;35468;35469;35470;35471;35472 28404;28405;28406;28407;28408 28404 5 9606 Homo sapiens -0.05143584043662486 MKEDCFR Unmodified 984.41572 0.41572158 1649 P53634;A0A7I2V2Q8;A0A7I2V466;B4DJQ8;A0A7I2V6E3;A0A7I2YQT5 CTSC Dipeptidyl peptidase 1;Dipeptidyl peptidase 1 exclusion domain chain;Dipeptidyl peptidase 1 heavy chain;Dipeptidyl peptidase 1 light chain yes no 0 0 1 5.5 0.5 1 1 38.257 38.344 3 0.073154 8858 20230619_1886_Aki_TMTPro18x_K_F6 58.426 47.204 281140 265380 319420 308070 483350 407000 422100 358550 308520 322060 405410 232410 203110 155500 432500 163870 203350 131170 260510 243210 323580 308970 485960 403320 425570 368720 324530 324580 401820 237760 224140 163490 421620 163640 196280 125200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139480000 18690 1649 17586 35473;35474 28409 28409 1 9606 Homo sapiens -0.07710964782859264 MKEEVPTALVEAHVR Oxidation (M) 1723.8927 0.89270474 645 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 0 1 1 5.5 0.5 1 1 44.191 44.277 4 8.9574E-05 11344 20230619_1886_Aki_TMTPro18x_K_F6 106.3 86.461 194900 163660 184490 209700 220280 204330 212130 221590 263010 219520 260770 251970 271710 222070 249500 244270 277070 263930 180170 150200 188910 207920 225540 207520 215960 225150 264830 223010 268060 253390 275850 231280 255580 246250 264740 250520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 231790000 18691 645 17587 35475;35476 28410;28411 28410 384 2 9606 Homo sapiens 0.059714097918231346 MKEEVPTALVEAHVR Unmodified 1707.8978 0.89779012 645 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 0 0 1 6 0 1 47.801 47.882 4 6.5542E-05 12998 20230619_1886_Aki_TMTPro18x_K_F6 99.451 73.327 47737 38718 48416 46379 47201 57829 61603 53321 60980 50817 52232 50195 56928 46453 53131 62614 57688 55438 44144 35513 49115 46370 49533 57489 61233 54733 61778 51497 54206 50900 57768 48895 54397 62233 55136 52740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78360000 18692 645 17587 35477 28412 28412 1 9606 Homo sapiens 0.07215713654454703 MKETAENYLGHTAK Oxidation (M) 1607.7614 0.76135622 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;Q2F839 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 1 1 7.5 0.5 1 1 40.914 40.945 4 3.0515E-06 9602 20230619_1887_Aki_TMTPro18x_K_F7 132.84 98.535 615210 544410 608100 669910 870410 672120 785810 744640 628550 781650 894980 573770 481130 368700 911170 336580 350860 282580 569100 499320 622320 666360 878230 681990 792490 756680 660190 780900 886210 585160 523390 385680 884900 337770 340640 269220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 437260000 18693 1488 17588 35478;35479 28413;28414;28415 28414 997 3 9606 Homo sapiens -0.01821400576045562 MKETAENYLGHTAK Unmodified 1591.7664 0.7664416 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;Q2F839 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 1 7.67 0.471 1 2 46.892 46.954 3;4 1.4623E-08 12248 20230619_1888_Aki_TMTPro18x_K_F8 153.26 136.57 180510 155340 193840 189260 203200 199120 211200 207830 179050 226740 246950 171600 160970 113110 259610 97177 107110 74670 167070 142470 195880 188540 210180 200890 211620 212190 187050 226260 246090 174690 171270 117880 252940 97244 103740 71279 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 946970000 18694 1488 17588 35480;35481;35482 28416;28417 28416 2 9606 Homo sapiens -0.005770967134367311 MKGDYFR Unmodified 915.42727 0.42727255 3511;3535 P27348;B4DMT8;Q53S41;B4DY04;E9PG15;V9HWD6;P31946-2;P31946;B5BU24 YWHAQ;HEL-S-1;YWHAB 14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed no no 0 0 1 1.5 0.5 1 1 42.187 42.227 3 0.059886 10801 20230619_1881_Aki_TMTPro18x_K_F2 62.88 50.302 1652400 1492800 1514600 1554200 1697400 1790300 1721600 1650800 1698000 1619000 1725600 1357300 1419900 1113100 1858700 1206600 1272200 781190 1527800 1367000 1552900 1568400 1748500 1790200 1734000 1695200 1732100 1629900 1754400 1382000 1478200 1161100 1846100 1189800 1219500 748290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1808799999.9999998 18695 3511;3535 17589 35483;35484 28418 28418 1 9606 Homo sapiens -0.033823996972159875 MKGDYYR Unmodified 931.42219 0.42218717 2805;145;3701;3536 D0PNI1;P63104;E7EX29;B0AZS6;P63104-2;B7Z2E6;H0YB80;E7ESK7;A0A024R1K7;Q04917;B2R6N6;Q9H4N8;A2IDB2;P31947-2;P31947;P61981;B3KNB4;B4DHC4 YWHAZ;YWHAH;SFN;YWHAG 14-3-3 protein zeta/delta;14-3-3 protein eta;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed no no 0 0 1 3.67 3.09 1 1 1 37.368 37.383 3 0.031277 8414 20230619_1888_Aki_TMTPro18x_K_F8 72.485 55.117 2624900 2104000 2668000 2445400 2968400 2682400 2623900 2847800 2764000 2192800 2526500 1725200 1722600 1326900 2704700 1355000 1873100 786030 2427200 1929400 2708700 2446300 3045300 2700200 2671700 2879300 2796400 2237000 2564600 1760900 1828300 1383400 2679200 1334500 1792600 756590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2165800000 18696 2805;145;3536;3701 17590 35485;35486;35487 28419;28420 28420 2 9606 Homo sapiens -0.04626703559836187 MKPILLQGHER Oxidation (M) 1336.7285 0.72853995 1678 Q13347;A0A7I2YQF8;Q5U0F4;Q53HU7;A0A7I2V613;A0A7I2V607;A0A7I2V3N2;A0A7I2V2M3;A0A7I2V640;A0A7I2YQI2;A0A7I2V5V8;A0A7I2YQU2;A0A7P0MRT9;A0A7I2V685;A0A7I2YQI6;Q5TFK1;A0A7I2V4S8;A0A7I2V3K6;A0A7I2YQP9;A0A7I2V4C2;A0A7I2V391;A0A7I2YQN1;A0A7I2V5E4;A0A7I2V3T4;A0A7I2YQX4 EIF3I Eukaryotic translation initiation factor 3 subunit I yes no 0 1 1 2 0 1 37.722 37.786 4 0.00038084 8784 20230619_1881_Aki_TMTPro18x_K_F2 122.33 106.94 81917 75769 83451 84135 94920 97571 92388 93970 115430 34022 80431 64389 37904 43869 67462 45747 45527 40054 75820 69416 84811 84491 97590 97588 94001 94675 114490 38654 82232 63430 41507 45926 66755 45711 43734 38123 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219790000 18697 1678 17591 35488 28421 28421 1094 1 9606 Homo sapiens 0.07364481882450491 MKPILLQGHER Unmodified 1320.7336 0.73362533 1678 Q13347;A0A7I2YQF8;Q5U0F4;Q53HU7;A0A7I2V613;A0A7I2V607;A0A7I2V3N2;A0A7I2V2M3;A0A7I2V640;A0A7I2YQI2;A0A7I2V5V8;A0A7I2YQU2;A0A7P0MRT9;A0A7I2V685;A0A7I2YQI6;Q5TFK1;A0A7I2V4S8;A0A7I2V3K6;A0A7I2YQP9;A0A7I2V4C2;A0A7I2V391;A0A7I2YQN1;A0A7I2V5E4;A0A7I2V3T4;A0A7I2YQX4 EIF3I Eukaryotic translation initiation factor 3 subunit I yes no 0 0 1 3 0 1 41.924 41.986 4 0.00056158 10454 20230619_1882_Aki_TMTPro18x_K_F3 108.56 85.04 236980 203060 246190 256790 256910 311870 271050 285170 326510 98216 128870 132990 112520 102160 171900 95330 146530 102520 219270 186320 249590 255620 266650 310420 274120 288190 320790 110740 140980 132510 118310 105980 171910 96588 140140 97459 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199370000 18698 1678 17591 35489 28422 28422 1 9606 Homo sapiens 0.08608785745082059 MKPQEPIHNR Unmodified 1248.6397 0.63972494 234 A0A6Q8PHS7;A0A6Q8PGS5;C9JEX3;A0A024R3B7;A0A6Q8PHL9;A8K5G2;Q13614-2;Q13614 MTMR2 Myotubularin-related protein 2 yes no 0 0 1 4.5 3.5 1 1 32.366 32.368 4 0.00013273 6448 20230619_1888_Aki_TMTPro18x_K_F8 138.22 114.98 63742 48502 60004 57124 83030 80736 78779 80659 96017 68811 82104 84685 82932 73136 79049 77844 87123 84714 58886 44492 61588 57315 84251 79871 80188 82058 96198 70707 84951 84871 84459 76058 80886 78550 83264 80398 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 29897000 18699 234 17592 35490;35491 28423;28424;28425 28425 3 9606 Homo sapiens 0.02535066642781203 MKPQEPIHNR Oxidation (M) 1264.6346 0.63463956 234 A0A6Q8PHS7;A0A6Q8PGS5;C9JEX3;A0A024R3B7;A0A6Q8PHL9;A8K5G2;Q13614-2;Q13614 MTMR2 Myotubularin-related protein 2 yes no 0 1 1 7.5 0.5 1 1 29.663 29.724 4 0.0096077 5613 20230619_1888_Aki_TMTPro18x_K_F8 85.533 72.917 21917 21951 16241 17869 23630 24241 19107 21177 24463 17557 23181 21830 17788 15690 16387 16962 30226 20140 20251 20057 17086 18484 23849 23984 19696 21741 24539 18078 23593 21764 18280 16453 17449 17203 28717 19132 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13245000 18700 234 17592 35492;35493 28426;28427 28427 144 2 9606 Homo sapiens 0.012907627801496346 MKQEPVKPEEGR Oxidation (M) 1442.7188 0.71876312 220 P61586;A0A024R324;B4DKN9;A0A994J514;Q9BVT0 RHOA;ARHA Transforming protein RhoA yes no 0 1 2 5 0.816 1 1 1 33.806 33.866 4 0.027773 7185 20230619_1886_Aki_TMTPro18x_K_F6 58.268 46.067 225140 158110 200360 214320 266440 243230 233020 234950 253000 242910 320160 286820 267820 237910 287330 219050 251600 186670 207800 145300 206590 212160 270290 243680 237580 240820 259180 246390 322850 287550 275870 245870 289460 218950 240630 177880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 564240000 18701 220 17593 35494;35495;35496 28428;28429 28429 132 2 9606 Homo sapiens 0.015112490863884886 MKYDESDNAFIR Oxidation (M) 1503.6664 0.6663932 3189 M0QXU7;Q9UPE4;Q53G69;O43615 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 yes no 0 1 1 4.5 0.5 1 1 43.591 43.654 3 0.00034491 11106 20230619_1883_Aki_TMTPro18x_K_F4 97.779 78.201 135020 117050 133140 142920 156940 168490 159240 168890 178560 165390 173280 168560 182120 143100 179360 182660 159320 163860 124880 107350 135820 142550 161170 168460 161040 172360 180610 167430 178420 170180 185340 150560 181350 181880 152660 155820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 145150000 18702 3189 17594 35497;35498 28430 28430 1853 1 9606 Homo sapiens -0.06529334047240809 MKYDESDNAFIR Unmodified 1487.6715 0.67147858 3189 M0QXU7;Q9UPE4;Q53G69;O43615 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 yes no 0 0 1 4.5 0.5 1 1 47.357 47.417 3 0.048918 12605 20230619_1885_Aki_TMTPro18x_K_F5 48.229 26.356 40876 34370 40283 38214 42157 54253 50942 50390 59704 47241 45506 44715 48367 41571 50264 48530 59468 48539 37799 31499 41003 38504 43944 53538 51108 51640 59729 47864 47492 45411 49387 43357 51570 48667 56734 46142 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86264000 18703 3189 17594 35499;35500 28431 28431 1 9606 Homo sapiens -0.05285030184609241 MLAEDELR Unmodified 975.46953 0.46953129 258 P84077;A0A024R3Q0;A0A8V8TQC0;A0A8V8TNZ5;P61204;A0A8V8TQP8;A0A024R0Y6;A0A8V8TNZ0;F5H423;B4E190;P61204-2 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 0 0 1.5 0.5 1 1 47.001 47.039 2 0.0053022 13150 20230619_1880_Aki_TMTPro18x_K_F1 113.91 69.77 564970 403590 520930 631540 467040 636640 621530 576610 756370 774490 743370 870380 873020 693220 675810 841960 889890 1020700 521660 371490 532910 618630 494750 641450 621770 598810 762680 775040 769640 872630 877390 729290 703430 853120 850280 967110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 365270000 18704 258 17595 35501;35502 28432;28433 28432 2 9606 Homo sapiens -0.019184690795100323 MLAIYDGFDGFAK Unmodified 1446.6853 0.68533773 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;Q8WTZ9;O14943;H0Y3Y3 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 8 0 1 64.02 64.041 3 2.8905E-06 19564 20230619_1888_Aki_TMTPro18x_K_F8 103.46 92.632 73927 70994 88576 75742 73077 85903 96044 89844 102600 105510 94862 93128 125300 94493 102760 115680 98322 116680 68545 65010 88468 76311 77736 86203 95718 91922 103910 105420 99015 95172 125750 98629 104720 115920 94244 110740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151250000 18705 1831 17596 35503 28434 28434 1 9606 Homo sapiens -0.020137526855251053 MLAQQAVK Oxidation (M) 903.48479 0.48478743 1878 B2RE46;A0A994J5J1;P04844-2;P04844;Q5JYR3 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 1 0 8 0 1 40.366 40.358 2 0.0012998 9645 20230619_1888_Aki_TMTPro18x_K_F8 138.37 109.03 63177 51955 62887 56947 101070 110190 98186 91652 143740 14495 14681 19569 15522 13210 43530 17743 23056 12771 58417 47613 64467 57815 101950 106940 100400 92823 138290 19209 21263 19477 17201 14060 42494 17566 22186 12220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29571000 18706 1878 17597 35504 28435 28435 1207 1 9606 Homo sapiens 0.029184425083599308 MLATLEPEQR Oxidation (M) 1202.5965 0.59652272 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 1 0 3 0 1 43.6 43.67 2 0.0011216 11207 20230619_1882_Aki_TMTPro18x_K_F3 106.68 78.515 46452 37600 44502 49688 60734 52388 53426 56142 55546 57702 65318 61321 67075 57177 55904 64411 69897 69650 42935 34523 45625 49218 61486 52890 54374 57129 56883 58330 66597 61976 67877 59508 57861 64881 66740 66099 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39919000 18707 3654 17598 35505 28436 28436 2350 1 9606 Homo sapiens 0.003328320748096303 MLATLEPEQR Unmodified 1186.6016 0.6016081 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 3.5 0.5 1 1 50.878 50.929 2 0.00033418 14386 20230619_1883_Aki_TMTPro18x_K_F4 151.97 132.7 136470 109020 124680 133890 102500 149510 145410 121680 149960 171210 172460 181310 183990 147200 161450 191110 180870 202620 126080 100020 127420 133350 109660 149280 144250 127640 153490 170670 176450 182410 186280 155350 165820 191890 173020 192250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326680000 18708 3654 17598 35506;35507 28437 28437 1 9606 Homo sapiens 0.015771359374184613 MLDAEDIVGTARPDEK Oxidation (M) 1774.8407 0.84072875 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;G3V2N5;A0A804HJQ9;G3V2W4;B4DRP5;A0A804HJN7 ACTN1 Alpha-actinin-1 yes no 0 1 1 3 0 1 50.125 50.201 3 0.0083062 14219 20230619_1882_Aki_TMTPro18x_K_F3 68.653 52.711 139340 104000 117820 116480 122490 132260 140980 144080 167670 190050 184990 159860 198290 147890 172810 200700 186270 191160 128610 95365 121540 116890 127420 132860 141920 147530 170120 188640 189380 163350 200600 155860 177070 200210 178130 181640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158660000 18709 387 17599 35508 28438 28438 246 1 9606 Homo sapiens -0.015697984125608855 MLDAEDIVGTARPDEK Unmodified 1758.8458 0.84581413 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;G3V2N5;A0A804HJQ9;G3V2W4;B4DRP5;A0A804HJN7 ACTN1 Alpha-actinin-1 yes no 0 0 1 4 0 1 54.244 54.26 3 0.00025134 15911 20230619_1883_Aki_TMTPro18x_K_F4 93.152 71.394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18710 387 17599 35509 28439 28439 1 9606 Homo sapiens -0.0032549454992931715 MLDFFTIFSK Unmodified 1247.626 0.62603194 3408 Q6IAX9;P08240-2;P08240 SRPR Signal recognition particle receptor subunit alpha yes no 0 0 0 5 0 1 67.004 67.046 3 0.013727 20998 20230619_1885_Aki_TMTPro18x_K_F5 66.19 52.837 6839.3 6265.7 7230.5 5106.9 5027.7 5849.8 5578.9 5193 6674.2 6518.8 7992.8 6226.5 6621.3 4508.7 5653.2 7443.2 7069.3 7791.7 6331.9 5726.7 7265.3 5273.8 5414.5 5850.3 5633.3 5386.7 6785.8 6508.3 8064 6284.9 6748 4869.2 5854.3 7445 6755.2 7394.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3638700 18711 3408 17600 35510 28440 28440 1 9606 Homo sapiens 0.01212396090954826 MLDGLRK Unmodified 831.46366 0.46365805 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 1 2 0 1 45.241 45.322 3 0.074446 12278 20230619_1881_Aki_TMTPro18x_K_F2 53.754 29.568 98587 77990 94363 101040 103530 110960 97524 106160 125290 94175 115680 98817 113640 85242 94689 116840 126050 96721 91110 71599 96372 100270 106680 111340 99576 108450 125560 96017 118910 99784 115100 90063 98462 115720 120100 92187 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47320000 18712 2436 17601 35511 28441 28441 1 9606 Homo sapiens 0.04118477199494919 MLDHEYTTK Oxidation (M) 1152.5121 0.51212439 2724 P11387;B9EG90;Q969P6;Q969P6-2;E5KMK7;E5KMK6;E5KMK5;B4DYD2;B7Z9E8;E5RIC7;D3DWJ7;E5RJ95;E5RFS0;H0YBR3;E5RGR2;E5RFE3;E5RGR4;E5RGE7;H0YC03;E5RJ33 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial yes no 0 1 0 3.5 0.5 1 1 37.627 37.676 3 0.0023034 8650 20230619_1882_Aki_TMTPro18x_K_F3 84.054 68.515 122090 87945 116690 119480 141560 142540 134460 135480 162240 147720 176630 183660 175810 147670 155950 166050 207210 189920 112770 80811 119360 118360 144820 142240 136860 139220 164230 149740 180530 183580 178550 154500 161800 167890 197640 180200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 315660000 18713 2724 17602 35512;35513 28442;28443 28442 1634 2 9606 Homo sapiens -0.05803118741960134 MLDHEYTTK Unmodified 1136.5172 0.51720977 2724 P11387;B9EG90;Q969P6;Q969P6-2;E5KMK7;E5KMK6;E5KMK5;B4DYD2;B7Z9E8;E5RIC7;D3DWJ7;E5RJ95;E5RFS0;H0YBR3;E5RGR2;E5RFE3;E5RGR4;E5RGE7;H0YC03;E5RJ33 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial yes no 0 0 0 4.5 0.5 1 1 41.809 41.873 3 0.0024891 10365 20230619_1883_Aki_TMTPro18x_K_F4 78.655 61.713 107870 73185 119630 115120 142570 156000 108080 130010 153990 144120 177060 168330 161230 151320 152590 127030 192010 177660 99728 67383 120830 113290 145400 153990 112510 134910 155170 145690 179800 169170 164760 155370 157330 130980 183240 168260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 468380000 18714 2724 17602 35514;35515 28444 28444 1 9606 Homo sapiens -0.045588148793285654 MLDMGFEPQIR 2 Oxidation (M) 1367.6214 0.62135726 1328;3137;1018 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7;P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3KRZ1;J3QSF1;Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;Q5S4N1;B4E132;B4E010 DDX17;DDX5;DKFZp686J01190;DDX3X;DDX3Y Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5;ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y no no 0 2 0 4 0 1 49.897 49.932 2 0.087761 13892 20230619_1883_Aki_TMTPro18x_K_F4 49.742 42.093 68394 61227 65187 69214 86088 74050 71334 73999 77999 80532 85270 75838 90654 69558 70678 98903 79042 83583 63254 56109 66790 69328 87215 74590 73013 75765 79430 80887 87294 77073 91347 73527 72844 97973 75578 79533 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155860000 18715 1328;3137;1018 17603 35516 28445 28445 576;577 1 9606 Homo sapiens -0.04774856114090653 MLDMGFEPQIR Oxidation (M) 1351.6264 0.62644264 1328;3137;1018 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7;P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3KRZ1;J3QSF1;Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;Q5S4N1;B4E132;B4E010 DDX17;DDX5;DKFZp686J01190;DDX3X;DDX3Y Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5;ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y no no 0 1 0 4.8 0.748 2 2 1 54.958 54.997 2;3 8.1197E-05 16238 20230619_1883_Aki_TMTPro18x_K_F4 119.34 112.29 140920 123310 142320 160820 147850 170110 158540 165200 171680 179940 172500 161250 188120 159050 161780 209000 172750 196930 130370 113170 144660 159420 153460 171170 159690 169490 174290 180490 177550 164590 190250 166790 165850 208400 165350 187080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281930000 18716 1328;3137;1018 17603 35517;35518;35519;35520;35521 28446;28447;28448 28446 576;577 3 9606 Homo sapiens -0.03530552251481822 MLDMGFEPQIR Unmodified 1335.6315 0.63152802 1328;3137;1018 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7;P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3KRZ1;J3QSF1;Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;Q5S4N1;B4E132;B4E010 DDX17;DDX5;DKFZp686J01190;DDX3X;DDX3Y Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5;ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y no no 0 0 0 6 0 1 61.087 61.142 3 1.8128E-06 18584 20230619_1886_Aki_TMTPro18x_K_F6 155.53 143.61 57250 53082 54121 55220 40963 60523 58654 55726 61693 65710 55221 60153 76575 59256 55862 69708 65505 67915 52957 48604 55069 55690 44186 60675 58214 57535 62476 65708 57919 61268 76458 61741 57775 69744 62598 64516 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 281960000 18717 1328;3137;1018 17603 35522 28449 28449 1 9606 Homo sapiens -0.02286248388850254 MLDPGLMTCSK Unmodified 1251.5662 0.56615057 2225 B2R5U7;Q03701 CEBPZ CCAAT/enhancer-binding protein zeta yes no 0 0 0 8 0 1 56.876 56.933 3 0.0024778 16531 20230619_1888_Aki_TMTPro18x_K_F8 66.262 53.062 53776 53587 57279 59383 49076 61519 58497 57241 65291 60702 52300 52257 61751 54561 63492 59570 62118 60637 49820 49081 57793 59542 51928 61949 58656 58875 65633 60928 54708 53506 62825 56476 64431 59861 59437 57587 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25554000 18718 2225 17604 35523 28450 28450 1 9606 Homo sapiens -0.04956985906233058 MLDQTLLDLNEM Oxidation (M) 1450.6684 0.66836704 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;B4DQ80;Q8NI98;A0A024R4K5;A0A0S2Z4I4;P06753-5;P06753-7 TPM3;DKFZp686J1372;OK/SW-cl.5;hCG_1787567 Tropomyosin alpha-3 chain no no 0 1 0 2.5 1.12 1 1 1 1 65.387 65.4 2 5.0848E-05 20943 20230619_1881_Aki_TMTPro18x_K_F2 125.48 107.04 82533 72690 79366 88278 78913 90564 88653 91787 96185 102120 105120 92181 107940 92338 100670 121160 100830 116380 76328 66663 80938 87906 82296 91433 89088 93951 97956 102340 107480 94134 109720 96776 102620 120960 96578 110530 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 254510000 18719 1095;1096 17605 35524;35525;35526;35527 28451;28452;28453;28454 28452 672;673 4 9606 Homo sapiens -0.03894041353623834 MLDQTLLDLNEM Unmodified 1434.6735 0.67345241 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;B4DQ80;Q8NI98;A0A024R4K5;A0A0S2Z4I4;P06753-5;P06753-7 TPM3;DKFZp686J1372;OK/SW-cl.5;hCG_1787567 Tropomyosin alpha-3 chain no no 0 0 0 3.5 1.71 1 1 1 1 1 1 67.102 67.126 2 0.00055716 21404 20230619_1882_Aki_TMTPro18x_K_F3 103.55 91.699 24941 22159 24678 22193 15669 25037 27584 23368 28045 30853 23398 24655 33273 26218 27264 29602 29106 29152 23073 20286 24954 22468 17363 25057 27130 24194 28389 30595 24669 25349 33348 27190 27942 29664 27831 27694 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 70986000 18720 1095;1096 17605 35528;35529;35530;35531;35532;35533 28455;28456;28457;28458 28456 4 9606 Homo sapiens -0.026497374909922655 MLDQTLLDLNEM 2 Oxidation (M) 1466.6633 0.66328166 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;B4DQ80;Q8NI98;A0A024R4K5;A0A0S2Z4I4;P06753-5;P06753-7 TPM3;DKFZp686J1372;OK/SW-cl.5;hCG_1787567 Tropomyosin alpha-3 chain no no 0 2 0 3 0 1 63.59 63.621 2 0.00087954 19933 20230619_1882_Aki_TMTPro18x_K_F3 94.692 94.692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18721 1095;1096 17605 35534 28459 28459 672;673 1 9606 Homo sapiens -0.05138345216232665 MLEANDGSGMLDEDEEDLQR 2 Oxidation (M) 2297.9264 0.92638523 2837 D3VVF5;D3VVI9;D3VVG9;D3VVN1;D3VVJ1;D3VVL1;D3VVB2;D3VVI8;D3VVG8;D3VVB3;D3VVQ2;D3VVJ3;D3VVG7;D3VVE5;D3VVD6;D3VVN0;D3VVJ4;D3VVK7;D3VVT4;D3VVT6;D3VVI2;D3VVD7;D3VVT5;D3VVR6;D3VVE3;D3VVL5;D3VVD3;D3VVJ2;D3VVJ9;D3VVS1;D3VVB4;D3VVG5;D3VVR7;D3VVQ3;D3VVR5;D3VVR4;D3VVR8;D3VVN3;D3VVR3 ATXN3 yes no 0 2 0 1 0 1 48.324 48.324 3 0.031067 13670 20230619_1880_Aki_TMTPro18x_K_F1 54.834 51.34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18722 2837 17606 35535 28460 28460 1697;1698 1 9606 Homo sapiens -0.17066090870503103 MLEDPQER Oxidation (M) 1032.4546 0.45460951 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8;A0A8V8TQ76;A0A8V8TRI2;H0YIL9 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 1 0 1 0 1 34.587 34.587 2 0.027605 7816 20230619_1880_Aki_TMTPro18x_K_F1 103.87 84.095 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18723 117 17607 35536 28461 28461 50 1 9606 Homo sapiens -0.06031960947484549 MLEDRDLFVMR Unmodified 1423.6952 0.69519091 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 6.5 0.5 1 1 55.55 55.618 3 4.0464E-06 16296 20230619_1886_Aki_TMTPro18x_K_F6 146.16 111.47 55459 46867 50259 49615 42017 49216 48698 54569 56496 56061 51861 43627 54700 47331 51817 63798 52573 47512 51252 42933 51357 49915 44520 49935 48990 55394 56948 56199 53500 45038 55608 49555 52850 62905 50259 45318 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35169000 18724 3152 17608 35537;35538 28462 28462 1 9606 Homo sapiens 0.00029112048196111573 MLEIDPQK Unmodified 972.49502 0.49501776 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ0;A0A5F9ZHD4;A0A5F9ZI66 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 4.5 0.5 2 2 53.026 53.072 2;3 0.0033616 15383 20230619_1883_Aki_TMTPro18x_K_F4 96.253 65.999 168330 151190 179570 199860 198550 224420 227390 207350 244500 255570 267400 274250 293800 236800 247040 303610 305750 311450 155830 138760 181930 198110 205490 224650 228090 214360 249120 256270 274450 276330 296750 249100 255580 304280 292010 295710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 440480000 18725 1208 17609 35539;35540;35541;35542 28463;28464 28463 2 9606 Homo sapiens 0.007670054429240736 MLEIDPQK Oxidation (M) 988.48993 0.48993238 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ0;A0A5F9ZHD4;A0A5F9ZI66 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 1 0 4 0 1 47.713 47.753 2 0.075114 12959 20230619_1883_Aki_TMTPro18x_K_F4 87.696 57.126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18726 1208 17609 35543 28465 28465 746 1 9606 Homo sapiens -0.004772984196847574 MLEILEQQK Unmodified 1130.6005 0.60054547 2076 A8K5J1;P11172;B5LY71;P11172-3;B5LY64;B5LY69;P11172-2;P11172-4;E9PFD2;B5LY67 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase;Orotidine 5'-phosphate decarboxylase yes no 0 0 0 6.5 0.5 1 1 61.623 61.669 3 0.0010813 18539 20230619_1887_Aki_TMTPro18x_K_F7 96.331 57.065 163780 126410 149720 164460 135940 165860 163210 162330 181130 167400 170050 169820 171740 159880 169050 187680 183240 206450 151280 116070 153160 162970 143190 167480 163570 166250 183040 169020 175100 172000 175210 166700 172840 189150 175350 195800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155010000 18727 2076 17610 35544;35545 28466;28467 28467 2 9606 Homo sapiens 0.04046921568556172 MLEQLDMR Unmodified 1034.4889 0.48888653 724;3204 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;F6TRA5;Q59G92;A0A0A0MT12;B4DIJ6;F6S4E6;B4DIZ8;A0A140T973;A0A140T9K1;A0A140T9L4;O00148;O00148-2;K7EQN7;A0A024R7H0;O00148-3;K7EPJ3 DDX39B;hCG_2005638;DDX39A;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A no no 0 0 0 4.5 0.5 1 1 53.421 53.466 2 0.005101 15547 20230619_1883_Aki_TMTPro18x_K_F4 114.5 96.462 238260 189130 215200 236980 181380 271590 235870 237190 270460 276400 255160 266260 302150 244250 245520 295810 298790 306750 220090 173570 220240 235800 193190 271020 235780 245740 273090 276960 264610 269980 304160 255510 253870 296890 285420 291210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 773000000 18728 724;3204 17611 35546;35547 28468 28468 1 9606 Homo sapiens -0.026978360602470275 MLEVFHAIK Unmodified 1086.5896 0.58958685 3646 P53618;E9PP73 COPB1 Coatomer subunit beta yes no 0 0 0 2 0 1 57.879 57.894 3 0.0006287 17748 20230619_1881_Aki_TMTPro18x_K_F2 108.43 70.711 90078 71326 83119 91181 75478 73372 95439 101740 110920 108000 89572 85287 116150 91787 73854 145920 122880 95030 83222 65471 84940 90250 79487 76223 95562 102120 111340 108110 93992 87957 115720 97300 78939 142700 116900 90901 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 269970000 18729 3646 17612 35548 28469 28469 1 9606 Homo sapiens 0.049755639848854116 MLEYALK Unmodified 866.45718 0.45717569 1887;2547;3266 A0AV58;Q13033-2;Q13033;G3V340;M0QXN2;Q0VAF9;M0R2A7;G3V3G7;M0QYS2;Q0VAF8;M0R0P4;M0R0W8;Q9NRL3-2;F5GYK2;B4DMU7;Q59GV6;Q9NRL3;Q9NRL3-3;O43815;A0A097F6U9;Q3B874;O43815-2 STRN3;STRN4;LOC729862;STRN;ALK fusion Striatin-3;Striatin-4;Striatin;Tyrosine-protein kinase receptor no no 0 0 0 8 0 1 57.693 57.745 2 0.0074997 16870 20230619_1888_Aki_TMTPro18x_K_F8 108.09 58.047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18730 1887;2547;3266 17613 35549 28470 28470 1 9606 Homo sapiens 0.01860539248104942 MLFATPPSSTYEK Unmodified 1470.7065 0.7064671 2879 H0YB03;H0YB83;E5RH53;Q96DB5;H0YC67;Q96DB5-3;Q96DB5-2;H0YC27;H0YBD9 RMDN1 Regulator of microtubule dynamics protein 1 yes no 0 0 0 1.5 0.5 1 1 57.993 58 3 0.0001415 17837 20230619_1881_Aki_TMTPro18x_K_F2 96.745 80.171 30177 26975 28191 33717 25421 35531 32972 35256 40614 36344 35286 32342 39070 30555 36691 35993 38348 39560 27905 24744 28807 33515 26900 35764 33046 36058 40722 36560 36602 32965 39626 31891 37438 36284 36684 37532 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34864000 18731 2879 17614 35550;35551 28471 28471 1 9606 Homo sapiens -0.010057873766299963 MLFCSCQDQACAER Unmodified 1774.6895 0.68952996 3214 O00451;O00451-2;O00451-3;E5RGR6;B4DS89 GFRA2 GDNF family receptor alpha-2 yes no 0 0 0 4.5 0.5 1 1 48.838 48.895 3 1.5291E-05 13281 20230619_1885_Aki_TMTPro18x_K_F5 115.12 115.12 191530 184570 188170 185890 258910 244570 226350 229870 260660 232930 259480 254490 249670 226330 249200 285220 277850 279250 177270 168930 192420 188520 262170 242720 231180 235860 263530 235960 265850 256560 255230 237420 255200 285240 265580 265300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82271000 18732 3214 17615 35552;35553 28472;28473 28473 2 9606 Homo sapiens -0.16682722588052457 MLFDYLADK Unmodified 1114.5369 0.53688258 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;A0A7I2V3I2;H0YBP5;A0A7I2V4G3;E5RGA2;A0A7I2V5P9;A0A161SXE1;A0A7I2V570;A0A7I2V429;H0YBR5;A0A7I2V3W9;A0A7I2V2Q9;A0A7I2V5K7 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 0 8 0 1 63.667 63.689 3 0.0035932 19397 20230619_1888_Aki_TMTPro18x_K_F8 80.231 69.892 102580 78615 89833 104390 75291 105730 104250 105270 118590 137240 124230 117740 151940 117220 123190 156650 131810 148210 94721 72201 92220 103300 80353 106730 103890 108420 120350 136370 128350 120450 152740 123090 126440 156210 126140 140800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 392480000 18733 1659 17616 35554 28474 28474 1 9606 Homo sapiens -0.015804388685637605 MLFKDDYPSSPPK Unmodified 1523.733 0.7330162 2061 H3BQQ9;A8K503;Q7KZS0;B0QYN7;P63279;H3BPC4 UBE2I SUMO-conjugating enzyme UBC9 yes no 0 0 1 1 0 1 52.95 52.95 4 0.016824 15578 20230619_1880_Aki_TMTPro18x_K_F1 68.83 51.549 66580 60824 75630 64824 64107 73630 75913 73611 56600 84378 84002 50745 60410 44171 94539 49387 42519 35054 61678 55707 75841 65314 67751 73807 75325 75463 59937 83599 83717 52868 63888 46101 92414 48906 41133 33474 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72019000 18734 2061 17617 35555 28475 28475 1 9606 Homo sapiens -0.007900984853222326 MLFWACSTNKPEGYR Unmodified 1858.8495 0.84945972 4333 Q96CS3 FAF2 FAS-associated factor 2 yes yes 0 0 1 5 0 1 56.787 56.849 3 9.3809E-06 16631 20230619_1885_Aki_TMTPro18x_K_F5 115.83 105.19 66623 55650 65288 79099 62656 74508 71201 75682 81627 77340 70257 68265 74034 65318 78531 85277 76144 78244 61602 51131 66483 77858 65572 75684 71636 77283 82133 77804 72796 69644 75675 68521 79684 84963 72892 74383 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57457000 18735 4333 17618 35556 28476 28476 1 9606 Homo sapiens -0.04561103257083232 MLGAPDESSVR Acetyl (Protein N-term);Oxidation (M) 1218.5551 0.55505184 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;Q7Z4S6-6;A0A024R0V9 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 1 1 0 1 0 1 41.87 41.87 2 0.019966 10943 20230619_1880_Aki_TMTPro18x_K_F1 51.488 51.488 104400 51109 129160 139370 181200 151640 134630 164570 128460 127310 174780 180700 154270 134350 154420 71591 181190 146310 96484 47580 129910 133500 182360 152640 138410 166180 133060 132180 176310 179270 158100 136860 158010 77441 172860 138300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30102000 18736 4170 17619 35557 28477 28477 2687 1 9606 Homo sapiens -0.04548348684488701 MLGEALSK Oxidation (M) 863.44225 0.44225391 4405 Q99623;F5GY37;Q9BXV3 PHB2 Prohibitin-2 yes no 0 1 0 6.5 0.5 1 1 46.775 46.86 2 0.0069865 12049 20230619_1887_Aki_TMTPro18x_K_F7 102.51 48.357 297980 243350 283050 313510 387990 386350 389550 371680 457590 351900 416550 398740 416230 348070 388070 402960 423440 412590 275420 223370 290540 311750 394500 384880 394610 380200 460310 358340 429180 401140 423480 363630 397130 404590 404730 391810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281570000 18737 4405 17620 35558;35559 28478;28479 28479 2765 2 9606 Homo sapiens 0.005070473801310982 MLGEALSK Unmodified 847.44734 0.44733929 4405 Q99623;F5GY37;Q9BXV3 PHB2 Prohibitin-2 yes no 0 0 0 7.5 0.5 1 1 52.82 52.893 3 0.0019979 14794 20230619_1887_Aki_TMTPro18x_K_F7 102.95 59.823 100340 81969 90784 113970 109450 122610 119270 117040 145650 123300 126730 130850 145420 111400 125140 142570 136220 130610 92705 75301 93452 112520 112540 123160 120460 120140 146090 124550 131750 131860 146790 117230 128310 142060 130190 124200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85839000 18738 4405 17620 35560;35561 28480 28480 1 9606 Homo sapiens 0.01751351242739929 MLGETCADCGTILLQDK Unmodified 1923.874 0.87401949 3004 G3V1B8;H0YEB6;O60232;E9PN57;H0YEK1 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 yes no 0 0 0 5 1 1 1 60.669 60.7 3 1.0354E-13 18389 20230619_1886_Aki_TMTPro18x_K_F6 160.47 149.99 61233 45874 55243 55332 43798 65009 55403 55739 68638 73461 65777 69925 88639 76822 64350 97993 84487 97921 56545 42094 56462 55234 46879 64753 55618 58050 69123 73210 68628 71412 88619 80142 67164 98020 80735 92957 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117140000 18739 3004 17621 35562;35563 28481;28482 28482 2 9606 Homo sapiens -0.05096255956505047 MLGPEGGEGFVVK Acetyl (Protein N-term);Oxidation (M) 1376.6646 0.66460229 470 A0A024R7T3;P52597;A0A1B0GW42 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 1 1 0 3 0.816 1 1 1 60.677 60.693 2 2.0816E-08 18908 20230619_1881_Aki_TMTPro18x_K_F2 120.09 103.87 169100 144020 154640 181690 227780 228000 219720 214060 218710 187110 190170 190590 210590 174680 174600 217960 192440 205930 156290 132140 159550 180950 230380 226760 221890 218910 221740 190700 197360 192880 212560 183000 179410 217540 184050 195670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 378970000 18740 470 17622 35564;35565;35566 28483;28484 28483 287 2 9606 Homo sapiens -0.008663430651722592 MLGPEGGEGFVVK Acetyl (Protein N-term) 1360.6697 0.66968766 470 A0A024R7T3;P52597;A0A1B0GW42 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 1 0 0 3.5 0.5 1 1 63.667 63.686 2 9.513E-05 19968 20230619_1882_Aki_TMTPro18x_K_F3 114.4 95.303 451260 382050 440060 479410 397710 584250 560000 595530 628920 627760 494950 529200 634350 544010 532370 663490 578910 668740 417270 350530 447850 477540 421980 582630 557310 608140 631880 629740 520480 542160 638280 567140 546460 664710 554070 634790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1005499999.9999999 18741 470 17622 35567;35568 28485;28486;28487 28486 3 9606 Homo sapiens 0.0037796079743657174 MLGSGFK Acetyl (Protein N-term);Oxidation (M) 796.37893 0.37892537 2078 P53990-4;P53990;P53990-2;A8K5S3;H3BMU1;P53990-3;B4DLP1;H3BUI0;B4DM80;H3BQF7;F5GXM3;B4DHF3;H3BRE2;H3BPP6;E9PF00;H3BQ38 IST1 IST1 homolog yes no 1 1 0 6 0 1 51.398 51.475 2 0.0082836 14510 20230619_1886_Aki_TMTPro18x_K_F6 83.801 63.519 67751 61237 70148 65790 69398 83348 74720 71272 82764 55538 55522 57745 57978 49374 71924 66709 58006 61016 62706 56090 71031 66329 72335 82673 75272 73234 82701 57097 58415 58271 59759 52113 72098 66459 55655 58003 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40820000 18742 2078 17623 35569 28488 28488 1299 1 9606 Homo sapiens -0.02740893337113448 MLGSGFK Acetyl (Protein N-term) 780.38401 0.38401075 2078 P53990-4;P53990;P53990-2;A8K5S3;H3BMU1;P53990-3;B4DLP1;H3BUI0;B4DM80;H3BQF7;F5GXM3;B4DHF3;H3BRE2;H3BPP6;E9PF00;H3BQ38 IST1 IST1 homolog yes no 1 0 0 7.5 0.5 1 1 59.756 59.797 2 0.03635 17727 20230619_1887_Aki_TMTPro18x_K_F7 57.559 45.128 35681 29342 31311 32505 28497 32736 34269 38801 34823 44339 37268 37047 40996 33257 41969 40639 43072 38235 32961 26892 32136 32592 29993 33231 34259 39345 35601 44260 38297 37800 41757 34834 42711 40594 41167 36359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23950000 18743 2078 17623 35570;35571 28489 28489 1 9606 Homo sapiens -0.014965894745046171 MLGTEGGEGFVVK Acetyl (Protein N-term);Oxidation (M) 1380.6595 0.65951691 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;D6RBM0;D6RIU0;D6RIT2;D6R9T0;D6RIH9;D6RFM3;E5RGV0;D6RJ04;D6RAM1;D6RDU3;E7EN40;E7EQJ0;D6RDL0;D6RF17;D6R9D3;E5RJ94 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 1 1 0 3.5 1.12 1 1 1 1 59.451 59.476 2 5.6744E-16 18383 20230619_1881_Aki_TMTPro18x_K_F2 114.5 96.185 397650 347430 360860 385910 372900 394140 401380 403260 444600 466340 503290 469000 516540 466120 469590 553330 485700 519080 367570 318370 369930 386820 387120 398330 404520 413040 452950 468000 513960 476190 524670 485360 479710 552520 464790 493260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 583280000 18744 1427 17624 35572;35573;35574;35575 28490;28491 28490 900 2 9606 Homo sapiens -0.015586469277877768 MLGTEGGEGFVVK Acetyl (Protein N-term) 1364.6646 0.66460229 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;D6RBM0;D6RIU0;D6RIT2;D6R9T0;D6RIH9;D6RFM3;E5RGV0;D6RJ04;D6RAM1;D6RDU3;E7EN40;E7EQJ0;D6RDL0;D6RF17;D6R9D3;E5RJ94 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 1 0 0 3.5 0.5 1 1 63.357 63.376 2 1.969E-10 19827 20230619_1882_Aki_TMTPro18x_K_F3 93.111 88.956 593830 529100 588640 604770 410920 597480 584090 595600 652220 788990 730790 736000 869630 691600 763920 823760 850410 869690 549370 484930 595990 604650 446710 604490 581370 613750 664460 785180 752230 747960 877810 722280 783740 828090 812960 825480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1491399999.9999998 18745 1427 17624 35576;35577 28492;28493 28492 2 9606 Homo sapiens -0.0031434306515620847 MLIQENQELGR Unmodified 1329.6711 0.67108465 3907 Q15007;A8K489;Q6AHX7 WTAP;DKFZp686F20131 Pre-mRNA-splicing regulator WTAP yes no 0 0 0 4 0 1 49.096 49.134 2 0.00067914 13600 20230619_1883_Aki_TMTPro18x_K_F4 130.98 106.83 46071 39895 45131 47923 44924 54458 51234 45137 57721 56860 54884 61554 64735 54382 54935 61287 67827 66086 42609 36585 45946 47820 46892 54354 51483 47095 58346 56996 56919 62000 65300 56708 56777 61730 64760 62724 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72917000 18746 3907 17625 35578 28494 28494 1 9606 Homo sapiens 0.019435948861882935 MLLADQGQSWK Unmodified 1275.6282 0.6281572 3419 V9HWE9;P09211;A8MX94;A0A087X2E9 HEL-S-22;GSTP1 Glutathione S-transferase P yes no 0 0 0 4.5 3.5 1 1 57.359 57.385 2;3 5.462E-07 17406 20230619_1880_Aki_TMTPro18x_K_F1 165.66 130.15 193080 138940 171680 189870 149250 256500 207720 219480 264580 248750 243670 316300 316660 288030 280960 275300 311250 385090 178240 127680 176090 188350 159230 253160 207810 227510 265510 251970 254700 316760 319330 297430 287970 283020 298020 364330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 345920000 18747 3419 17626 35579;35580 28495;28496 28495 2 9606 Homo sapiens 0.0013682482876902213 MLLADQGQSWK Oxidation (M) 1291.6231 0.62307182 3419 V9HWE9;P09211;A8MX94;A0A087X2E9 HEL-S-22;GSTP1 Glutathione S-transferase P yes no 0 1 0 7 0.816 1 1 1 52.647 52.721 3 0.00019148 14689 20230619_1888_Aki_TMTPro18x_K_F8 107.03 91.654 397790 322690 363890 430850 408590 494700 426900 434300 495320 492440 544400 610590 565270 525710 526420 512530 619100 715300 367550 296310 373610 426860 421860 493830 431560 449470 502730 498200 557620 611250 574770 544450 541030 526650 592130 676890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 673510000 18748 3419 17626 35581;35582;35583 28497 28497 2035 1 9606 Homo sapiens -0.011074790338625462 MLLAHVDLIEK Oxidation (M) 1296.7112 0.71115855 3728 P62875 POLR2L DNA-directed RNA polymerases I, II, and III subunit RPABC5 yes yes 0 1 0 7 0 1 55.103 55.164 3 0.00089365 15805 20230619_1887_Aki_TMTPro18x_K_F7 89.266 66.04 205590 169090 193390 210120 215490 208310 209380 217440 242830 219900 234570 214080 266600 200060 231530 263890 214800 252910 190020 155150 197850 208830 221750 211080 212570 221570 245170 221970 242310 217320 269180 210330 235330 263440 205940 240190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268320000 18749 3728 17627 35584 28498 28498 2407 1 9606 Homo sapiens 0.07467141556776369 MLLCEAVAAVMAK Unmodified 1405.7131 0.71314916 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 4 0.707 1 2 1 65.808 65.833 2;3 5.2132E-08 20752 20230619_1883_Aki_TMTPro18x_K_F4 166.33 148.01 21093 16493 20722 18594 18070 21819 17907 19049 23071 21802 22194 19369 22509 18440 19811 26051 24216 29144 19496 15122 21026 18657 19001 21756 18239 19720 23178 21819 22803 19763 22836 19468 20473 26205 23161 27630 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 76207000 18750 3650 17628 35585;35586;35587;35588 28499;28500 28500 2 9606 Homo sapiens 0.0265211097869269 MLLDPMGGIVMTNDGNAILR Oxidation (M) 2146.0585 0.058466216 2435 B3KX11;P49368;Q59H77;B4DUR8;E9PRC8;Q5SZX6;Q5SZX9 CCT3 T-complex protein 1 subunit gamma yes no 0 1 0 1 0 1 63.802 63.802 3 0.0071599 20055 20230619_1880_Aki_TMTPro18x_K_F1 57.989 50.277 7972.7 5224.2 5856.5 6490.2 6205.9 8317.1 7002.8 8227.4 7497.9 9201.6 10087 10513 12470 9800 9060.6 12390 11750 12448 7346.8 4797.9 6136 6474.4 6457.1 8264.8 7035.3 8431.6 7722 9283.2 10331 10594 12484 10273 9440.2 12402 11221 11820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24507000 18751 2435 17629 35589 28501 28501 1498 1 9606 Homo sapiens 0.03127932194092864 MLLDPMGGIVMTNDGNAILR Unmodified 2130.0636 0.063551594 2435 B3KX11;P49368;Q59H77;B4DUR8;E9PRC8;Q5SZX6;Q5SZX9 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 4.5 3.5 1 1 64.68 64.69 3 1.2644E-36 20394 20230619_1880_Aki_TMTPro18x_K_F1 223.97 197.17 30623 26512 30132 27732 22400 29235 30594 32362 31883 32049 33823 32618 40734 34430 31037 44307 41846 40326 28323 24282 30525 27953 24131 29520 30432 32829 32489 32423 34899 33186 40903 35974 32400 44102 39923 38349 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77508000 18752 2435 17629 35590;35591 28502;28503 28502 2 9606 Homo sapiens 0.04372236056724432 MLLDSVLTTHER Unmodified 1413.7286 0.72859953 2976 F5H702;Q96GC5-3;Q96GC5 MRPL48 39S ribosomal protein L48, mitochondrial yes no 0 0 0 7 0 1 54.716 54.78 3 1.1016E-26 15648 20230619_1887_Aki_TMTPro18x_K_F7 188.91 164.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18753 2976 17630 35592 28504 28504 1 9606 Homo sapiens 0.038284370917835986 MLLFVEQVASK Acetyl (Protein N-term) 1305.7003 0.70025951 4143 Q71RC2-5;Q71RC2;Q71RC2-4;Q71RC2-6;Q71RC2-7;Q6P4E2;F8W1Z5 LARP4 La-related protein 4 yes no 1 0 0 7 0 1 69.619 69.638 2 0.013288 21941 20230619_1887_Aki_TMTPro18x_K_F7 45.137 24.235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18754 4143 17631 35593 28505 28505 1 9606 Homo sapiens 0.05963739182493555 MLLGHMPTVELLK Unmodified 1480.8146 0.81457776 788 A8K097;A0A024RE04;Q5JVF3-3;Q5JVF3-2;Q5JVF3;Q5JVF3-4;A0A024RDZ9 RP11-98F14.6;PCID2 PCI domain-containing protein 2 yes no 0 0 0 3 0 1 61.832 61.862 3 0.06268 19145 20230619_1882_Aki_TMTPro18x_K_F3 42.095 26.83 30489 25840 29512 30269 29030 30120 26441 32589 31020 36506 32267 31422 36373 29329 37160 38113 39537 38320 28191 23692 30049 30214 30117 30537 26985 33206 31440 36513 33231 32064 37022 30803 37908 38167 37797 36399 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51681000 18755 788 17632 35594 28506 28506 1 9606 Homo sapiens 0.09340305672958493 MLLHSEQHPGQLK Oxidation (M) 1532.7769 0.7769467 540 P32322-3;P32322;A0A024R8U9;E7D7X9;P32322-2;A0A1B2JLU7;E7D7Y0;E2QRB3;Q2TU78;J3QKT4;Q8TBX0;J3KQ22;B7Z8T1 PYCR1;PIG45 Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase yes no 0 1 0 7.67 0.471 1 2 37.96 37.971 4 5.6864E-05 8421 20230619_1887_Aki_TMTPro18x_K_F7 116.06 87.429 128940 115600 133480 154190 130960 139110 144240 148330 154760 187950 223680 233160 207450 166980 191980 213090 242360 240940 119340 106110 135290 152320 136520 142040 145090 152000 159880 189060 225600 232370 211450 176910 198390 214880 231390 228560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 245010000 18756 540 17633 35595;35596;35597 28507;28508 28507 316 2 9606 Homo sapiens 0.03186930731658322 MLLNDFLNDQNRDK Unmodified 1734.8359 0.83591814 79 Q8N995;A0A024R059;Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes no 0 0 1 7.5 0.5 1 1 59.742 59.783 3 3.6971E-06 17684 20230619_1887_Aki_TMTPro18x_K_F7 120.66 102.75 130320 117730 121180 123470 63816 69580 88356 91191 90580 135770 124210 90385 159980 100090 77874 216500 142590 123790 120510 107820 122970 123620 71495 75047 87893 92913 93715 133350 127080 94489 158050 109140 84975 210050 135670 118630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73214000 18757 79 17634 35598;35599 28509 28509 1 9606 Homo sapiens -0.0021063776466689887 MLLQSSEGR Unmodified 1019.507 0.50697943 3312 O75643;A4FU77;A0A494C1A5;B4E150 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 6.5 0.5 1 1 43.548 43.634 2 0.001431 11065 20230619_1886_Aki_TMTPro18x_K_F6 115.86 92.304 59898 47362 54282 64159 72684 82017 75162 79007 87492 71808 87369 89423 73134 69990 71818 73522 88167 81492 55331 43502 55958 63622 74145 81484 76011 80709 88350 73507 89034 89312 75098 72984 73962 74280 84153 77342 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102630000 18758 3312 17635 35600;35601 28510 28510 1 9606 Homo sapiens -0.001993778138739799 MLLSLPEK Unmodified 929.52559 0.52558961 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24;E2PSM9 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 2 0 1 60.035 60.046 2 2.1208E-06 18634 20230619_1881_Aki_TMTPro18x_K_F2 155.75 106.41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18759 2414 17636 35602 28511 28511 1 9606 Homo sapiens 0.05800783827965006 MLLSLPEK Oxidation (M) 945.5205 0.52050423 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24;E2PSM9 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 1 0 8 0 1 54.967 55.033 2 0.020097 15746 20230619_1888_Aki_TMTPro18x_K_F8 83.313 35.407 73981 68395 77285 82872 86618 98295 94045 82652 105710 89853 93891 86281 98304 79591 92397 103040 98182 93394 68489 62712 78420 82694 89445 97868 94717 85743 106520 90371 97038 87585 99891 83571 94437 102600 93851 88826 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56229000 18760 2414 17636 35603 28512 28512 1490 1 9606 Homo sapiens 0.04556479965356175 MLLVDELR Unmodified 987.5423 0.54230231 3472 P18085;C9JAK5;C9JPM4;U3KQF2 ARF4 ADP-ribosylation factor 4 yes no 0 0 0 5 0 1 59.348 59.402 2 0.0010359 17649 20230619_1885_Aki_TMTPro18x_K_F5 121.99 43.374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18761 3472 17637 35604 28513 28513 1 9606 Homo sapiens 0.04803284713909761 MLLVQGQFPR Oxidation (M) 1203.6434 0.64341333 1527 A0A3B3IUA2;A0A3B3ISK4 yes no 0 1 0 3.5 0.5 1 1 53.777 53.812 2 0.027619 15698 20230619_1883_Aki_TMTPro18x_K_F4 68.422 51.848 176140 124230 141530 175880 167650 172920 167910 167390 198310 179810 210090 212660 195320 180820 195760 227430 210990 225500 162460 114210 147230 173250 172110 174950 170240 171780 200700 182090 214380 213400 199950 189930 200080 227600 201830 214150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 227080000 18762 1527 17638 35605;35606 28514;28515 28515 1011 2 9606 Homo sapiens 0.049737364166276166 MLLYTEVTR Unmodified 1124.59 0.58998078 1080;2533 A0A0S2Z3X8;P31150;B4DHX4;B4DH24;G5E9U5;Q6IAT1;B4DLV7;P50395;Q5SX86;V9GYF8;Q5SX90;V9GYJ7 GDI1;GDI2 Rab GDP dissociation inhibitor alpha;Rab GDP dissociation inhibitor beta no no 0 0 0 4.5 3.04 1 1 1 1 55.725 55.753 2 8.495E-06 16718 20230619_1880_Aki_TMTPro18x_K_F1 176.75 138.62 906120 817030 903840 958500 697690 842600 764070 776160 794630 1084500 1155200 1294900 1082200 1079100 1163200 1136000 1165000 1337500 838380 748970 915470 954990 743330 859480 768510 806270 823220 1085300 1166300 1296800 1111500 1122700 1181400 1152200 1115900 1267600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1217900000 18763 1080;2533 17639 35607;35608;35609;35610 28516;28517;28518 28516 3 9606 Homo sapiens 0.032669389140892235 MLLYTEVTR Oxidation (M) 1140.5849 0.5848954 1080;2533 A0A0S2Z3X8;P31150;B4DHX4;B4DH24;G5E9U5;Q6IAT1;B4DLV7;P50395;Q5SX86;V9GYF8;Q5SX90;V9GYJ7 GDI1;GDI2 Rab GDP dissociation inhibitor alpha;Rab GDP dissociation inhibitor beta no no 0 1 0 7 0.816 1 1 1 49.323 49.404 2 0.00058508 13277 20230619_1887_Aki_TMTPro18x_K_F7 124.08 83.812 244490 207030 215040 256530 266100 234750 245580 247480 236050 288450 299960 277820 271760 237910 272220 307430 271630 299620 225900 189930 221820 254700 271350 239520 248610 253090 243830 288840 303410 281270 278270 250380 276990 307290 260090 284560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1047699999.9999999 18764 1080;2533 17639 35611;35612;35613 28519;28520 28519 646 2 9606 Homo sapiens 0.020226350514576552 MLMETTVNLK 2 Oxidation (M) 1210.5937 0.59374553 4812 yes no 0 2 0 5 0 1 62.576 62.623 3 0.092962 19095 20230619_1885_Aki_TMTPro18x_K_F5 49.368 34.395 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18765 4812 17640 35614 28521 28521 2919;2920 1 9606 Homo sapiens -0.003127593743329271 MLMPHSK 2 Oxidation (M) 874.40409 0.40409427 2639 B4E0B8;Q8TDN6;Q9NUW4;A0JLQ5 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog yes no 0 2 0 8 0 1 31.802 31.807 3 0.053928 6219 20230619_1888_Aki_TMTPro18x_K_F8 49.358 30.261 26203 19453 30259 28021 33631 30724 29392 29361 36399 29734 31097 27373 33018 26250 34702 24956 32040 32249 24246 17884 30426 27629 34500 30842 30106 30099 36466 29976 32223 27859 33701 27073 35055 25541 30683 30552 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13162000 18766 2639 17641 35615 28522 28522 1590;1591 1 9606 Homo sapiens -0.03813161806192511 MLNHVLNICEK Oxidation (M) 1385.6795 0.67954084 2895 E7EQ69;Q9GZZ1;C9J5D1;B0AZT5 NAA50 N-alpha-acetyltransferase 50 yes no 0 1 0 1 0 1 47.66 47.66 3 0.0001342 13418 20230619_1880_Aki_TMTPro18x_K_F1 113.42 90.043 53234 46276 55912 57071 52489 56582 52607 54496 60365 50341 52001 43484 51680 40443 52957 60578 55381 51658 49264 42447 56521 56749 54785 57214 53304 55712 60704 50909 53686 44422 52800 42894 54003 60028 52938 49173 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105910000 18767 2895 17642 35616 28523 28523 1720 1 9606 Homo sapiens 0.002128255311617977 MLNHVLNICEK Unmodified 1369.6846 0.68462622 2895 E7EQ69;Q9GZZ1;C9J5D1;B0AZT5 NAA50 N-alpha-acetyltransferase 50 yes no 0 0 0 2 0 1 53.1 53.133 3 2.2372E-06 15810 20230619_1881_Aki_TMTPro18x_K_F2 152.14 118.73 189600 166470 189770 182970 134410 185110 176970 179210 207060 172890 144250 128690 154240 116250 175180 182360 163190 153480 175400 152530 191910 183560 145460 186860 176960 183320 206690 173790 151370 132350 158030 123900 177140 180550 156190 146110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66103000 18768 2895 17642 35617 28524 28524 1 9606 Homo sapiens 0.014571293937706287 MLPEIDQNK Unmodified 1086.5379 0.53794521 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;Q2TU89;Q3LIE0 EIF4G2;AAG1;Nbla00315 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 5 0 1 52.363 52.437 3 0.0025283 14798 20230619_1885_Aki_TMTPro18x_K_F5 87.476 69.164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18769 3752 17643 35618 28525 28525 1 9606 Homo sapiens -0.0018622449965732812 MLPLSLLK Acetyl (Protein N-term) 955.57763 0.57762518 3187 M0QXB0;V9GZ56;Q9Y4Z0 LSM4 U6 snRNA-associated Sm-like protein LSm4 yes no 1 0 0 3.5 0.5 1 1 67.91 67.94 2 0.0021473 21696 20230619_1882_Aki_TMTPro18x_K_F3 66.682 43.125 13287 11295 12191 12490 12230 13317 14489 14872 17647 6816.8 4582.8 6279.8 7429.7 6804.9 9343.9 6578.7 5835.8 6465.8 12281 10351 12479 12534 12766 13441 14567 14870 17250 7323.7 5461.3 6416.8 7589.9 6988.7 9258.7 6618.9 5621.9 6140.1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5441200 18770 3187 17644 35619;35620 28526 28526 1 9606 Homo sapiens 0.09805947241727608 MLPPPPMWR Unmodified 1123.5671 0.56707727 2826 Q15287;D3DU92;H3BTC0;H3BMM9;H3BV80;Q15287-2;Q15287-3;H3BPG5 RNPS1 RNA-binding protein with serine-rich domain 1 yes no 0 0 0 5.5 0.5 1 1 59.253 59.312 2 0.0014399 17654 20230619_1885_Aki_TMTPro18x_K_F5 115.78 72.654 60835 59716 63911 52881 64017 78963 65791 58725 68809 47204 44080 39522 51518 45089 57730 49907 53543 49662 56346 54599 64611 54369 66586 77426 66317 61087 68903 48164 46719 40697 52657 46588 58316 50091 51243 47186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63444000 18771 2826 17645 35621;35622 28527 28527 1 9606 Homo sapiens 0.010236413156462731 MLPQAATEDDIR Unmodified 1358.65 0.65001485 1108 A0A0S2Z4W4;Q7Z3D7;P98175-2;P98175;P98175-5;Q6PKH5 DKFZp686E2459;RBM10 RNA-binding protein 10 yes no 0 0 0 2 0 1 48.481 48.546 2 2.1225E-06 13793 20230619_1881_Aki_TMTPro18x_K_F2 174.77 126.48 39693 31927 34975 38678 35966 39984 45651 42123 41857 49988 52406 52811 49109 39116 46267 52513 56669 52631 36663 29288 35965 38529 37532 40386 45350 43106 43302 50151 53136 53016 50078 41520 47705 52543 54092 50003 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44706000 18772 1108 17646 35623 28528 28528 1 9606 Homo sapiens -0.01496415213318869 MLPSTSR Unmodified 790.40072 0.40072345 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;B4DV84;B4DPM7 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 4.5 3.5 1 1 38.109 38.094 2 0.0060056 9236 20230619_1880_Aki_TMTPro18x_K_F1 111.04 51.395 70776 45577 65492 70962 79095 86483 75835 78592 87649 67459 96535 90443 77405 78162 88182 63802 107600 86887 65317 41968 67204 69740 81013 86055 77036 80539 88856 69511 97767 90365 80219 80234 90404 65733 102620 82357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29218000 18773 2361 17647 35624;35625 28529;28530 28529 2 9606 Homo sapiens -0.002860885885411335 MLPTFVR Unmodified 862.47349 0.47349446 43;2017 Q68E10;E9PB90;A8K2U2;P52789;Q53SG7;A0A024R7R1;Q59H08;P52790;Q2TB90-3;Q2TB90-2;P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;A0A994J428;B3KRA9;A0A994J4Q4;A0A994J6R6;A0A994J4P6;A0A994J4A4;B1AR62;A0A994J6Q7;A0A994J499;A8K4Q9;B3KT70;Q2TB90 DKFZp686M1669;HK2;HK3;HKDC1;HK1 Hexokinase;Hexokinase-2;Hexokinase-3;Putative hexokinase HKDC1;Hexokinase-1 no no 0 0 0 4 0 1 54.43 54.446 2 0.014408 15989 20230619_1883_Aki_TMTPro18x_K_F4 112.66 62.543 152000 130910 151510 145290 164730 229550 216090 213310 279660 91343 84350 77477 97630 78850 125110 101010 112990 80745 140600 119960 154230 146710 171890 225190 216630 215690 272870 98813 96355 79500 100600 82465 125910 100100 108000 77025 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65353000 18774 2017;43 17648 35626 28531 28531 1 9606 Homo sapiens 0.03675665204877987 MLPTIIADNAGYDSADLVAQLR Unmodified 2346.1889 0.18894634 3756 V9HW96;P78371;F5GWF6;P78371-2;B7Z4R3;Q9H369 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 8 0 1 64.869 64.888 3 7.447E-38 19883 20230619_1888_Aki_TMTPro18x_K_F8 233.49 220.64 40697 37873 58602 53658 31492 57653 41219 46538 59448 73461 63905 68184 72129 66682 46602 61771 66623 84756 37674 34713 57621 52934 33885 57674 41245 47554 59789 72639 65702 69331 72187 68603 48215 61558 63677 80191 2 2 3 3 2 3 2 2 3 3 3 3 3 3 2 2 3 3 76129000 18775 3756 17649 35627 28532;28533;28534 28533 3 9606 Homo sapiens 0.06969942718296807 MLPTYVCATPDGTEK Unmodified 1681.7691 0.76914371 2017 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 yes no 0 0 0 6.5 0.5 1 1 55.834 55.901 3 0.00096354 16139 20230619_1887_Aki_TMTPro18x_K_F7 74.789 63.935 64373 57689 72523 69476 66912 73472 73906 69836 73660 77014 88805 75878 87712 67200 83838 73794 80009 79660 59622 52898 72889 69268 70090 73921 74140 71806 75663 77405 90275 76823 89295 70004 85052 74419 76586 75601 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76348000 18776 2017 17650 35628;35629 28535 28535 1 9606 Homo sapiens -0.04447009370801425 MLPVDEFLPVMFDK Unmodified 1679.8303 0.83028741 4243 Q8NBJ5;Q8WUI9;Q9H6F1;B3KQ10 COLGALT1;GLT25D1 Procollagen galactosyltransferase 1 yes no 0 0 0 7.5 0.5 1 1 66.632 66.653 3 5.4372E-05 20575 20230619_1888_Aki_TMTPro18x_K_F8 97.86 79.496 12220 13543 14738 14797 12090 16295 13281 12665 15928 19564 17267 19525 18321 16291 17618 21121 21018 20228 11344 12399 14725 14863 12820 16281 13412 13378 16153 19398 17716 19702 18641 17163 18134 21087 20071 19225 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62517000 18777 4243 17651 35630;35631 28536 28536 1 9606 Homo sapiens 0.017565473992817715 MLQAPESVLAEHYQDLR Unmodified 1998.9833 0.98331066 2955 H0Y6J0;Q4TT34;F2Z2X0;O00746;O00746-2;A2IDC9 NME4 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase, mitochondrial yes no 0 0 0 6 0 1 57.575 57.644 3 3.1945999999999996E-39 17141 20230619_1886_Aki_TMTPro18x_K_F6 265.43 242.63 23739 20860 21947 24349 25075 27085 25734 26193 30993 25790 27973 27182 29211 25496 25719 31269 29724 34485 21947 19123 22504 24341 25822 27166 26071 26809 31142 26141 28888 27491 29617 26664 26468 31490 28434 32702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357850000 18778 2955 17652 35632 28537 28537 1 9606 Homo sapiens 0.023778340494800432 MLQHEPDR Oxidation (M) 1040.4709 0.47092828 59 A0A024QZR3;B3KPC1;Q9BRX2 hCG_2002731;PELO Protein pelota homolog yes no 0 1 0 1 0 1 26.826 26.826 3 0.032769 4731 20230619_1880_Aki_TMTPro18x_K_F1 56.729 35.859 3101.4 2775.7 2009 4625 4062.7 3524.1 3278.3 3198.2 4658.8 4087.4 4643.4 4346.8 4125.2 2851.9 3943.2 3570.7 4953.6 3732.6 2861.1 2554.8 2177.1 4496.5 4034.2 3640.4 3391 3317.4 4666 4091.9 4739.3 4349.2 4214.5 3032.2 4066 3587.3 4721.3 3548 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1864900 18779 59 17653 35633 28538 28538 30 1 9606 Homo sapiens -0.0476883499077303 MLQHIDYR Oxidation (M) 1090.523 0.52296385 2604 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q9UIS4;Q15182;P14678-2;P63162;P14678;P63162-2;P14678-3;Q53HE7;J3KRY3;S4R3P3 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated proteins B and B';Small nuclear ribonucleoprotein-associated protein N yes no 0 1 0 6.5 0.5 1 1 36.072 36.136 3 0.00081296 7997 20230619_1886_Aki_TMTPro18x_K_F6 118.5 94.34 148290 114010 124690 148110 190600 186180 173970 173770 239950 118350 134370 127830 134800 108090 136400 126550 150340 120450 136890 104680 129750 147220 192300 185120 178260 176890 236120 123110 142810 128760 137660 113140 139370 126590 143500 114570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 311180000 18780 2604 17654 35634;35635 28539;28540 28539 1569 2 9606 Homo sapiens -0.018676715769970542 MLQHIDYR Unmodified 1074.528 0.52804923 2604 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q9UIS4;Q15182;P14678-2;P63162;P14678;P63162-2;P14678-3;Q53HE7;J3KRY3;S4R3P3 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated proteins B and B';Small nuclear ribonucleoprotein-associated protein N yes no 0 0 0 7.5 0.5 1 1 41.763 41.798 3 7.0652E-05 9965 20230619_1887_Aki_TMTPro18x_K_F7 168.27 143.34 283950 231970 252590 270490 291840 389440 317020 292360 401870 223860 219100 188120 200670 169210 276650 231460 234700 167640 262320 212710 260000 271500 301450 382360 320570 303560 396750 229300 232550 192180 209060 178400 277390 228210 224500 160150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 529470000 18781 2604 17654 35636;35637 28541;28542;28543 28541 3 9606 Homo sapiens -0.0062336771438822325 MLQLVEESK Unmodified 1075.5583 0.5583463 3682 P60880;P60880-2;A0A0A0MSS0 SNAP25 Synaptosomal-associated protein 25 yes no 0 0 0 5.5 0.5 1 1 59.564 59.622 3 0.0036333 17755 20230619_1885_Aki_TMTPro18x_K_F5 79.974 49.41 50858 47353 52770 44148 39199 46087 42316 43397 51959 54415 51180 51726 52370 49186 52689 57924 58387 59899 47082 43319 53182 44934 41907 46429 42827 44813 52386 54326 52611 52543 53466 51270 53916 58164 55820 56866 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15621000 18782 3682 17655 35638;35639 28544;28545 28545 2 9606 Homo sapiens 0.023589461601659423 MLQQVPENINFPAEEEK Acetyl (Protein N-term) 2056.9776 0.97755658 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;J3KR24;A0A804HJ36;A0A804HIV9;B4DVX2;A0A804HK69;A0A804HKU1;A0A804HIG2;A0A804HKW6;A0A0D9SFC1 IARS;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic yes no 1 0 0 2.5 1.12 1 1 1 1 63.709 63.721 3 2.8807E-23 20284 20230619_1881_Aki_TMTPro18x_K_F2 109.35 83.794 79817 70261 83425 76635 61412 80221 80868 77789 75249 105160 107110 98670 107970 103280 106420 106350 118000 124800 73867 64371 84088 76970 66110 80794 80304 80374 78357 104580 108400 100630 110170 106550 108880 107860 112840 118310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 287730000 18783 1736 17656 35640;35641;35642;35643 28546;28547 28546 2 9606 Homo sapiens -0.00865309252822044 MLQSIIK Unmodified 831.48881 0.48881017 966 A0A0A0MTQ5;G3V556;P56378 C14orf2;MP68 6.8 kDa mitochondrial proteolipid yes no 0 0 0 3.5 0.5 1 1 56.877 56.897 3 0.013066 17148 20230619_1882_Aki_TMTPro18x_K_F3 81.784 59.636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18784 966 17657 35644;35645 28548;28549 28548 2 9606 Homo sapiens 0.06632532002060998 MLQYCLQGLFHPAR Oxidation (M) 1748.8491 0.84906579 3309 O75533;Q9NTB4 SF3B1;DKFZp434M052 Splicing factor 3B subunit 1 yes no 0 1 0 6 0 1 57.849 57.918 3 8.715E-09 17213 20230619_1886_Aki_TMTPro18x_K_F6 152.4 134.73 82691 72672 78572 78191 84307 88520 89526 82687 98769 75185 76350 68590 73689 67724 80475 79925 79853 84236 76466 66571 80239 78686 87232 88635 90230 84695 99141 76245 79251 69953 75660 70530 81678 80367 76439 79946 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56178000 18785 3309 17658 35646 28550 28550 1937 1 9606 Homo sapiens 0.0045952181369557366 MLSCAGADR Oxidation (M) 995.41645 0.41644987 3513 X1WI28;X5D2T3;P27635;F8W7C6;H7C123;H7C2C5;Q96L21;B8A6G2;X5D2W5;A6QRI9 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like yes no 0 1 0 4.57 0.904 1 2 3 1 33.097 33.167 2 0.00161 6463 20230619_1883_Aki_TMTPro18x_K_F4 109.48 72.49 286930 199980 247210 256920 347700 330690 324480 333530 394600 290310 175550 182830 316660 201900 173740 299770 382880 289850 264760 183670 255950 255760 352350 328950 330470 339180 389480 292680 196520 191210 311840 213260 191350 298670 363670 275740 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 327230000 18786 3513 17659 35647;35648;35649;35650;35651;35652;35653 28551;28552;28553;28554 28552 2181 4 9606 Homo sapiens -0.08144170133812167 MLSCAGADR Unmodified 979.42154 0.42153524 3513 X1WI28;X5D2T3;P27635;F8W7C6;H7C123;H7C2C5;Q96L21;B8A6G2;X5D2W5;A6QRI9 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like yes no 0 0 0 4.5 1.12 1 1 1 1 38.597 38.665 2 4.5076E-08 8972 20230619_1883_Aki_TMTPro18x_K_F4 200.88 163.78 252710 177130 234300 233660 258580 305950 266480 274830 348410 272470 161140 165300 319370 195830 158970 293230 351840 276070 233330 162730 239930 232260 267230 303070 270650 282690 343060 272480 180920 173790 313120 206620 175790 291680 334250 262670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 359530000 18787 3513 17659 35654;35655;35656;35657 28555;28556 28555 2 9606 Homo sapiens -0.06899866271203337 MLSLQYPDVYRDETAVQDYHGHK Acetyl (Protein N-term);Oxidation (M) 2822.297 0.29699324 3598 P48147 PREP Prolyl endopeptidase no no 1 1 1 5 0 1 52.715 52.787 4 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41717000 18788 3598 17660 35658 0 9606 Homo sapiens -0.04126337489105936 MLTAQDMSYDEAR 2 Oxidation (M) 1561.6389 0.63885782 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 2 0 1.5 0.5 1 1 39.773 39.808 2 0.0066731 9710 20230619_1881_Aki_TMTPro18x_K_F2 72.096 65.207 11652 8809.3 8432.7 7662.1 15979 13099 11430 13211 12642 11406 16555 16978 14160 14487 16127 19508 16084 17846 10744 8060.9 8936.2 7915 15852 12853 11830 13429 12960 11793 16704 16917 14637 15271 16383 19420 15402 16962 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38167000 18789 2337;3778;3779 17661 35659;35660 28557 28557 1450;1451 1 9606 Homo sapiens -0.11949605369727578 MLTAQDMSYDEAR Oxidation (M) 1545.6439 0.6439432 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 1 0 2 0 1 45.274 45.356 2 0.013481 12275 20230619_1881_Aki_TMTPro18x_K_F2 91.313 84.107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18790 2337;3778;3779 17661 35661 28558 28558 1450;1451 1 9606 Homo sapiens -0.10705301507141485 MLTAQDMSYDEAR Unmodified 1529.649 0.64902858 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 2.33 0.471 2 1 50.264 50.328 2 8.0295E-36 14264 20230619_1882_Aki_TMTPro18x_K_F3 279.53 251.51 64657 53775 53408 54606 48302 75874 68452 69831 79764 85540 77445 87105 91865 75524 77667 92174 98931 95059 59707 49247 55159 55388 51334 74933 68196 72141 80577 85648 80260 87923 92633 79188 80476 92478 94424 90271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138210000 18791 2337;3778;3779 17661 35662;35663;35664 28559;28560 28560 2 9606 Homo sapiens -0.09460997644509916 MLTEAIMHDCVVK Unmodified 1545.7353 0.73534116 1676;2901;949 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;A0A0A0MSA7;A0A8I5QJH9;A0A804HJV5;A0A8J9G7U8;A0A8I5KT99;A0A0U1RQK7;Q59GJ0;A0A8I5KV92;O43432-4;O43432;O43432-3;B4DZE1;B4DH17 EIF4G1;EIF4G1 variant protein;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 0 0 7 0 1 56.424 56.482 3 2.0791E-08 16348 20230619_1887_Aki_TMTPro18x_K_F7 164.81 125.81 245000 196060 227560 217130 149030 221080 217600 211600 243990 300640 214020 225700 329180 238800 190030 351380 292620 325870 226380 179710 231430 217720 163360 222980 216330 219190 246370 296750 225980 233010 325540 252100 202250 349320 279220 309660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1034099999.9999999 18792 1676;2901;949 17662 35665 28561 28561 1 9606 Homo sapiens -0.01569709343516479 MLTINPAK Unmodified 886.49462 0.49462383 1836;1721 A0A8V8TQ77;A0A804CJ50;E9PBG7;Q13557-6;A0A994J5B0;D6R938;A0A8V8TNA7;A0A8V8TN65;A0A8V8TND4;Q13557-10;Q13557-8;E9PF82;Q13557-11;Q13557;B7Z2B0;A0A8V8TPK3;Q13557-3;A0A8V8TN88;A0A994J516;A0A8V8TN60;A0A8V8TPY4;A0A8V8TPJ8;A0A8V8TNA1;A0A994J7X8;Q13557-12;Q13557-5;Q13557-9;Q13557-4;A0A8V8TPM4;Q4G1A8;A0A8V8TNN9;H0Y9C2 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta no no 0 0 0 3 0 1 51.558 51.624 3 0.031443 14860 20230619_1882_Aki_TMTPro18x_K_F3 57.177 35.671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18793 1721;1836 17663 35666 28562 28562 1 9606 Homo sapiens 0.04683630513727621 MLTNHTFIK Unmodified 1103.5798 0.57975044 3554 P36507;Q7Z370;B3KS97;M0R1B6 MAP2K2;DKFZp686L02273 Dual specificity mitogen-activated protein kinase kinase 2 yes no 0 0 0 3.5 0.5 1 1 47.709 47.769 3 0.0015861 12980 20230619_1883_Aki_TMTPro18x_K_F4 93.096 60.154 99211 80457 85304 100040 86746 105280 92158 94726 118220 66615 54713 52675 61988 50351 80326 67262 67700 60127 91626 73826 87927 99467 90291 105790 93387 96766 116300 68518 59481 54070 63916 52927 80584 66966 64845 57212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101270000 18794 3554 17664 35667;35668 28563 28563 1 9606 Homo sapiens 0.0321037597952909 MLVDDIGDVTITNDGATILK Unmodified 2103.0769 0.076936277 3470 P17987;E7ERF2;F5H136;F5GZI8;F5H726;F5H676 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 5 0 1 63.931 63.977 2 2.4659E-35 19724 20230619_1885_Aki_TMTPro18x_K_F5 276.19 248.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18795 3470 17665 35669 28564 28564 1 9606 Homo sapiens 0.06952088641264709 MLVDLAK Unmodified 788.44661 0.44661101 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;A0A0J9YXP8;K7ERC6;K7EPY4;K7EP41;K7ENA0;A0A0J9YXM3;K7EIL4;K7ELR7;A0A2R8YF08;Q59F85;K7ERK8;A0A0J9YXH9 GPI Glucose-6-phosphate isomerase yes no 0 0 0 1 0 1 57.22 57.22 2 0.0099423 17349 20230619_1880_Aki_TMTPro18x_K_F1 105.39 21.776 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18796 1326 17666 35670 28565 28565 1 9606 Homo sapiens 0.04392556593677455 MLVELSK Unmodified 818.45718 0.45717569 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 5.2 3.06 1 1 1 2 55.965 56.005 2;3 0.0021125 16090 20230619_1888_Aki_TMTPro18x_K_F8 117.93 0 591420 534720 549870 607060 545820 641570 611320 608100 661940 732010 689180 731830 789790 649100 668990 801500 776420 825550 546910 490020 562370 607670 569430 645460 614290 626910 673170 733020 710490 740010 797050 680540 689070 803930 742180 783670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 811740000 18797 3622 17667 35671;35672;35673;35674;35675 28566;28567;28568 28568 3 9606 Homo sapiens 0.04068539248112302 MLVELSK Oxidation (M) 834.45209 0.45209032 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8 CCT4 T-complex protein 1 subunit delta yes no 0 1 0 6.5 0.5 1 1 49.501 49.582 2 0.042259 13375 20230619_1887_Aki_TMTPro18x_K_F7 83.753 6.0118 254460 215130 241410 256550 299160 272640 261060 262760 323030 294000 338260 315400 321930 265160 304860 364420 323020 321870 235240 197290 247180 255930 304820 274450 267400 269980 326130 296160 345450 317750 328210 280380 311640 362060 308880 306170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 365720000 18798 3622 17667 35676;35677 28569 28569 2310 1 9606 Homo sapiens 0.02824235385492102 MLVIEQCK Unmodified 1019.5144 0.514373 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 7.5 0.5 1 1 52.598 52.671 3 0.00031859 14739 20230619_1887_Aki_TMTPro18x_K_F7 148.38 94.414 503120 400890 456940 465560 437890 505570 479780 471770 532630 579980 542840 531280 646720 510650 526250 684430 619760 604510 464790 367620 467780 465500 457800 507490 483110 487190 540520 578860 560880 541090 650840 536750 543280 680050 591980 575070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1096500000 18799 2633 17668 35678;35679 28570;28571;28572 28570 3 9606 Homo sapiens 0.005396384621803918 MLVLDEADEMLNK Unmodified 1519.7262 0.72621627 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 0 4 0.816 1 1 1 63.871 63.899 3 0.00061855 20092 20230619_1882_Aki_TMTPro18x_K_F3 90.434 74.636 71904 55894 72955 68958 57636 74229 73417 78805 77706 84380 80882 94532 98970 85965 83930 97400 103460 110520 66475 51292 73781 68666 61577 74738 73294 80323 79104 85262 83723 95180 99752 89573 86761 98388 98848 104810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 384620000 18800 543 17669 35680;35681;35682 28573;28574;28575 28573 3 9606 Homo sapiens -0.012857794282126633 MLVLDEADEMLNK Oxidation (M) 1535.7211 0.72113089 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 1 0 4 0 1 62.452 62.457 3 0.010354 19399 20230619_1883_Aki_TMTPro18x_K_F4 63.727 54.563 16212 14246 15158 15255 17746 19155 18818 17287 17825 20331 17206 19888 18790 15606 17817 23939 19429 21826 14990 13049 15527 15381 18249 19038 18878 17871 18215 20364 17775 20061 19081 16679 18259 23783 18591 20744 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19578000 18801 543 17669 35683 28576 28576 321 1 9606 Homo sapiens -0.025300832908442317 MLVNENFEEYLR Oxidation (M) 1571.729 0.72899346 3420 P09455;A0A0A0MQT0;A0A0A0MTB9;H0YAK8;P09455-2;P09455-3 RBP1 Retinol-binding protein 1 yes no 0 1 0 4.6 1.02 1 1 2 1 59.879 59.916 2 1.2648E-12 17868 20230619_1885_Aki_TMTPro18x_K_F5 194.76 164.56 184270 166070 171620 184650 155580 134720 203980 217940 202640 176690 217610 207010 186820 177790 216470 239920 218960 249840 170400 152160 175200 184460 163840 142080 202900 215810 206900 181600 221230 208020 193190 187550 219890 240570 209690 237080 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 935190000 18802 3420 17670 35684;35685;35686;35687;35688 28577;28578;28579;28580 28579 2039 4 9606 Homo sapiens -0.03400187979036673 MLVNENFEEYLR Unmodified 1555.7341 0.73407884 3420 P09455;A0A0A0MQT0;A0A0A0MTB9;H0YAK8;P09455-2;P09455-3 RBP1 Retinol-binding protein 1 yes no 0 0 0 5 0.816 1 1 1 62.248 62.282 2 7.7702E-18 18932 20230619_1885_Aki_TMTPro18x_K_F5 266.39 213.84 518450 459460 522250 518680 296130 412900 564720 570700 564980 522550 567570 643600 594390 564370 609960 657480 670020 778180 479680 421060 526970 518000 333170 429070 554070 571010 575260 534180 584100 645190 607010 589550 623580 665790 641240 737440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2317000000 18803 3420 17670 35689;35690;35691 28581;28582 28582 2 9606 Homo sapiens -0.021558841164051046 MLVSGAGDIK Oxidation (M) 1005.5165 0.51648149 765;4294 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2;Q92526;Q92526-2;Q92526-3 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 no no 0 1 0 6.8 0.748 2 2 1 46.776 46.854 2;3 0.0018228 12415 20230619_1886_Aki_TMTPro18x_K_F6 96.342 51.65 370630 329550 367020 399650 430740 451640 413390 399150 519560 474480 544810 520110 505890 456520 460550 554400 540970 516530 342870 302210 374250 398500 441880 451670 421110 413490 524120 477050 555830 523980 515630 477960 474080 553200 516650 491100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 600550000 18804 765;4294 17671 35692;35693;35694;35695;35696 28583;28584;28585;28586 28583 466 4 9606 Homo sapiens 0.013943904716484212 MLVSGAGDIK Unmodified 989.52157 0.52156686 765;4294 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2;Q92526;Q92526-2;Q92526-3 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 no no 0 0 0 7.67 0.471 1 2 51.615 51.692 2 1.0073E-06 14210 20230619_1888_Aki_TMTPro18x_K_F8 138.98 73.937 286160 249130 297140 303200 296190 351790 314260 325980 341360 409490 371770 398800 441300 356540 365520 444720 428300 416840 264790 228480 300980 302420 308380 351420 316800 336960 347940 408920 383200 403800 444490 373910 376910 443710 409110 396260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 889790000 18805 765;4294 17671 35697;35698;35699 28587;28588 28588 2 9606 Homo sapiens 0.026386943342572522 MLVSGQGPVMENAQGLGFR Oxidation (M) 2005.9714 0.97136577 4466 Q9BXW7-2;Q9BXW7 CECR5 Cat eye syndrome critical region protein 5 yes no 0 1 0 1 0 1 56.681 56.681 3 5.8994E-05 17143 20230619_1880_Aki_TMTPro18x_K_F1 84.829 79.774 13300 13728 10468 11354 16765 12109 11789 14715 17903 14881 14651 14904 17298 10925 16776 18962 19641 19101 12296 12543 10958 11689 16751 12278 12367 14845 17767 15030 15303 15005 17527 11844 17238 18923 18761 18143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127540000 18806 4466 17672 35700 28589 28589 2780 1 9606 Homo sapiens 0.008618940346423187 MLVTFDEELRPLPVSVR Oxidation (M) 2016.0714 0.071397389 3840 Q59EG8;Q13200;B4DM22;Q13200-3;Q13200-2;Q13041 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 1 1 8 0 1 59.953 59.99 3 1.0077E-18 17785 20230619_1888_Aki_TMTPro18x_K_F8 189.59 157.77 69313 52169 62146 71606 66978 70256 71389 69792 77166 69102 77729 71277 75197 61791 73154 84722 71684 77409 64005 47934 63851 70678 69294 71133 71910 71337 78279 69949 79578 72006 76709 65262 74412 84326 68641 73580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2493900 18807 3840 17673 35701 28590 28590 2515 1 9606 Homo sapiens 0.10400454640057433 MLWGSDPYPHAEPQQATTPK Unmodified 2253.0525 0.052452861 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DQN8;B4DM27 PRRC2C Protein PRRC2C yes no 0 0 0 7 0 1 52.747 52.817 3 2.3043E-11 14854 20230619_1887_Aki_TMTPro18x_K_F7 131.48 121.83 16301 15787 19017 18188 12435 22181 17603 19989 19655 23412 18829 18472 26852 20210 20714 23993 20201 21317 15111 14466 18998 18228 13636 22056 17530 20650 19905 23325 19704 19037 26838 21004 21161 23892 19341 20271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16640000 18808 2894 17674 35702 28591 28591 1 9606 Homo sapiens -0.023951267216034466 MLYLIGLGLGDAK Unmodified 1362.7581 0.75810874 4502 Q9H2P9-3;Q9H2P9-2;Q9H2P9-6;Q9H2P9-4;Q9H2P9;Q9H2P9-5 DPH5 Diphthine synthase yes no 0 0 0 4.5 0.5 1 1 65.805 65.833 3 0.00011627 20750 20230619_1883_Aki_TMTPro18x_K_F4 97.911 73.058 17852 13783 16789 18462 14081 19336 15645 15810 21640 20809 22617 20163 21068 20620 22746 23003 20476 25636 16493 12659 17115 18265 14926 19395 15878 16533 21740 20755 23077 20524 21645 21375 22979 23225 19649 24302 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32734000 18809 4502 17675 35703;35704 28592;28593 28592 2 9606 Homo sapiens 0.09124001107898039 MMAIAPNVTVMVGELVGAR Unmodified 1958.0151 0.015144839 4712 Q9Y2X3;H7BZ72 NOP58 Nucleolar protein 58 yes no 0 0 0 5 0 1 66.406 66.449 3 5.6103E-12 20735 20230619_1885_Aki_TMTPro18x_K_F5 139.08 117.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18810 4712 17676 35705 28594 28594 1 9606 Homo sapiens 0.0744578720739355 MMCGAPSATQPATAETQHIADQVR Acetyl (Protein N-term);2 Oxidation (M) 2644.168 0.16796968 3379 Q76LA1;P04080;A0A1W2PS52 CSTB Cystatin-B yes no 1 2 0 3 0 1 45.083 45.156 3 2.6398E-26 11903 20230619_1882_Aki_TMTPro18x_K_F3 157.28 154.04 5785.6 3988.6 7125.5 4704.3 7789.5 6716.8 6209.5 6877.9 9114.8 5451.2 7484.2 5807.9 6554.3 6288.6 7899.8 5749.5 8118.5 6842.5 5354.8 3660.4 7118.6 4725.3 7983.2 6648 6446.2 6972.3 9042.1 5605.2 7705.4 5904.6 6788.7 6441.2 8008.8 5855.4 7756.8 6492.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56845000 18811 3379 17677 35706 28595 28595 1986;1987 1 9606 Homo sapiens -0.08834758715192947 MMDYLQGSGETPQTDVR 2 Oxidation (M) 1958.835 0.83499145 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 2 0 2 0 1 43.248 43.329 3 0.011414 11385 20230619_1881_Aki_TMTPro18x_K_F2 56.313 51.209 43801 27422 39995 37293 40613 39857 42584 38445 48050 43414 45160 41631 41635 30720 47752 43082 47069 43219 40413 25214 40929 36890 42163 40086 42991 39519 48516 43559 46309 41984 42864 32727 48385 43117 45015 41062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95034000 18812 3900;2497 17678 35707 28596 28596 1528;1529 1 9606 Homo sapiens -0.10607264986538212 MMDYLQGSGETPQTDVR Oxidation (M) 1942.8401 0.84007682 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 1 0 3 0 1 47.601 47.68 2 8.7885E-06 13092 20230619_1882_Aki_TMTPro18x_K_F3 102.87 96.64 10334 8442.4 9821.5 9423.8 11819 11217 11548 13149 13249 11027 12961 11428 13283 10983 13544 14320 14298 18459 9551.8 7738.4 10045 9467.7 12099 11257 11717 13234 13383 11272 13318 11585 13558 11530 13815 14562 13701 17474 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24104000 18813 3900;2497 17678 35708 28597 28597 1528;1529 1 9606 Homo sapiens -0.09362961123929381 MMEEFVPHSK Unmodified 1233.5522 0.55221507 4706 Q9Y2A7;Q9Y2A7-2;A0A994J4I5;A0A994J6K9 NCKAP1 Nck-associated protein 1 yes no 0 0 0 6 0 1 50.904 50.981 3 0.00014 14330 20230619_1886_Aki_TMTPro18x_K_F6 122.69 104.83 66509 54881 60164 63534 52385 73744 67841 70770 83659 83532 75554 84615 95657 77871 80082 93945 97394 102030 61454 50319 61571 63600 55607 73695 68005 72827 84050 83777 78836 85596 96248 81434 82737 94555 93050 96804 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24332000 18814 4706 17679 35709 28598 28598 1 9606 Homo sapiens -0.055218953430085094 MMEGLDDGPDFLSEEDR Acetyl (Protein N-term) 1996.803 0.80302262 2117 A8K885;Q9UNH7;G3V5X9;H0YJF8;G3V4Z5;G3V2U1 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 1 0 0 1 0 1 65.54 65.54 2 0.00058736 20742 20230619_1880_Aki_TMTPro18x_K_F1 59.898 56.135 1874.4 2420.5 2251.5 2120.4 2131.8 2589.7 3138.2 3903.9 3687.5 3053.7 3512.2 2671 5501.1 3649.1 3458.7 3242.3 3605.2 4513.8 1742.4 2211.2 2254.5 2176.6 2251.7 2613.7 3123.8 3869.9 3716.9 3120.8 3691.1 2766.7 5446.2 3718.6 3559.7 3336.6 3454.3 4270.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6217200 18815 2117 17680 35710 28599 28599 1 9606 Homo sapiens -0.1555067746030545 MMEIMTR Unmodified 910.40747 0.40746508 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;B7Z3M5;D6RB09;E9PFI5;H0Y9Y4;H0Y8L7;D6R9B6 RPS3A 40S ribosomal protein S3a yes no 0 0 0 7.5 0.5 1 1 50.518 50.596 2 0.020718 13758 20230619_1888_Aki_TMTPro18x_K_F8 104.21 62.707 556420 454950 528330 549180 412030 613660 548650 551730 662350 683260 611480 670930 794610 626370 564760 811830 795460 799860 514290 417320 537610 547750 442320 613860 548930 571430 666730 683190 637960 680120 794180 657660 592400 811370 758890 759820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 751130000 18816 3694 17681 35711;35712 28600;28601 28601 2 9606 Homo sapiens -0.0513223502382516 MMENGIKPVYVFDGKPPQLK Oxidation (M) 2306.1803 0.18029591 3568 Q6FHX6;P39748;B4DWZ4;P39748-2;F5H1Y3 FEN1 Flap endonuclease 1 yes no 0 1 2 2 0 1 57.689 57.704 4 0.045342 17665 20230619_1881_Aki_TMTPro18x_K_F2 44.382 28.44 49480 41678 48685 50640 41323 53257 53552 49760 53572 56902 57223 52073 63782 47641 57659 55519 50113 46373 45755 38229 49435 50443 43882 53560 53297 51281 54742 56974 58797 52944 64532 49727 58309 55172 47994 44156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87639000 18817 3568 17682 35713 28602 28602 2239;2240 1 9606 Homo sapiens 0.07945297548076269 MMGHRPVLVLSQNTK Acetyl (Protein N-term);2 Oxidation (M) 1783.9073 0.90730895 2435 B3KX11;P49368;Q2TU64;P49368-2;E9PRC8;Q5SZX9;E9PM09 CCT3 T-complex protein 1 subunit gamma yes no 1 2 1 2 0 1 39.798 39.868 3 2.098E-05 9731 20230619_1881_Aki_TMTPro18x_K_F2 42.125 33.305 108970 99725 80859 93997 159720 154140 116500 112190 154070 14814 24611 26543 24381 18985 37922 25785 31009 21505 100620 91242 85712 96197 158470 150430 120970 114920 149260 20849 31381 26263 25589 20180 37870 25606 29670 20506 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 269200000 18818 2435 17683 35714 28603 28603 1499;1500 1 9606 Homo sapiens 0.046711586683386486 MMIPDCQR Oxidation (M) 1065.4406 0.44055613 2886 E5RIW3;Q6FGD7;E5RJD8;O75347;E5RHG6;O75347-2 TBCA Tubulin-specific chaperone A yes no 0 1 0 5.33 0.471 2 1 40.244 40.335 2 0.0062422 10074 20230619_1886_Aki_TMTPro18x_K_F6 105.39 103.04 164320 137490 160170 146670 160530 171910 160000 158460 176590 148160 158290 144180 152690 126470 158320 169770 186520 139590 151930 125960 162950 147800 166680 171690 161920 162540 178160 150220 162970 146080 156310 133300 162500 168200 177860 133070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253330000 18819 2886 17684 35715;35716;35717 28604;28605 28605 1710;1711 2 9606 Homo sapiens -0.08954652971783617 MMLDDIVSR Oxidation (M) 1094.51 0.5100159 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5;M0QYH3;M0QXW7 KHSRP Far upstream element-binding protein 2 yes no 0 1 0 4.5 0.5 1 1 52.172 52.22 2 0.0078441 15060 20230619_1883_Aki_TMTPro18x_K_F4 84.615 75.752 171730 142980 170420 179390 171150 186320 205060 185850 232490 207490 229600 205110 217640 180390 226030 225910 212130 225870 158800 131190 173310 178280 178620 187890 205600 190540 235050 208520 235060 207620 222850 189340 228940 226290 203200 214490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 164160000 18820 3197 17685 35718;35719 28606 28606 1878 1 9606 Homo sapiens -0.033458707513773334 MMLDDIVSR Unmodified 1078.5151 0.51510128 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5;M0QYH3;M0QXW7 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 5 0 1 56.781 56.843 2 0.00065441 16605 20230619_1885_Aki_TMTPro18x_K_F5 128.12 98.96 336230 408780 638270 442200 893240 582210 834870 871440 724710 561320 522970 489920 433620 390880 762860 408950 550640 443120 314160 374120 625600 446640 901470 585810 841700 861300 736340 581390 542800 497270 461090 407480 756200 413780 528160 420910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230030000 18821 3197 17685 35720 28607 28607 1 9606 Homo sapiens -0.021015668887685024 MMLGTEGGEGFVVK Acetyl (Protein N-term);2 Oxidation (M) 1527.6949 0.69491614 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;D6RBM0;D6RIU0;D6RIT2;D6R9T0;D6RIH9;D6RFM3;E5RGV0;D6RJ04;D6RAM1;D6RDU3;E7EN40;E7EQJ0;D6RDL0;D6RF17;D6R9D3;E5RJ94 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 1 2 0 3 0.707 1 2 1 58.534 58.558 2 2.9314E-22 17649 20230619_1882_Aki_TMTPro18x_K_F3 130.94 120.01 76090 73377 71208 81469 100690 86528 88230 81900 85707 89207 98579 89313 90188 77508 88146 105900 84915 91381 70400 67216 73216 81688 101710 87105 89601 84210 88010 89756 100120 90339 92205 81815 89597 105100 81322 86924 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 323680000 18822 1427 17686 35721;35722;35723;35724 28608;28609;28610;28611 28609 900;901 4 9606 Homo sapiens -0.04782352462302697 MMLGTEGGEGFVVK Acetyl (Protein N-term);Oxidation (M) 1511.7 0.70000151 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;D6RBM0;D6RIU0;D6RIT2;D6R9T0;D6RIH9;D6RFM3;E5RGV0;D6RJ04;D6RAM1;D6RDU3;E7EN40;E7EQJ0;D6RDL0;D6RF17;D6R9D3;E5RJ94 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 1 1 0 3.5 0.5 1 1 62.404 62.421 2 1.4942E-08 19426 20230619_1882_Aki_TMTPro18x_K_F3 104.52 93.033 171620 153950 166690 192090 155370 214500 178410 187280 219350 213490 221620 228170 242860 216990 192560 281720 256800 295120 158750 141210 169780 191100 163310 214470 179880 193910 221250 214860 228190 230710 244940 227600 200750 282510 245350 280030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 360700000 18823 1427 17686 35725;35726 28612;28613 28612 900;901 2 9606 Homo sapiens -0.035380485996711286 MMLGTEGGEGFVVK Acetyl (Protein N-term) 1495.7051 0.70508689 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;D6RBM0;D6RIU0;D6RIT2;D6R9T0;D6RIH9;D6RFM3;E5RGV0;D6RJ04;D6RAM1;D6RDU3;E7EN40;E7EQJ0;D6RDL0;D6RF17;D6R9D3;E5RJ94 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 1 0 0 4.5 1.12 1 1 1 1 64.657 64.69 2 9.2582E-12 20277 20230619_1883_Aki_TMTPro18x_K_F4 120.68 120.68 272200 229940 263450 268200 176260 264830 260500 260960 284890 331050 293420 288830 347410 288450 292450 348370 328750 344350 251680 210830 267150 267750 192820 267850 258670 268750 289470 329480 302970 295130 350220 300820 300660 348730 314300 327050 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 625620000 18824 1427 17686 35727;35728;35729;35730 28614;28615;28616;28617 28615 4 9606 Homo sapiens -0.022937447370395603 MMPTPVILLK Acetyl (Protein N-term);2 Oxidation (M) 1215.6607 0.66070288 4005 Q53HV2;Q99832;Q6IBT3;F8WBP8 CCT7 T-complex protein 1 subunit eta yes no 1 2 0 4.5 3.5 1 1 62.818 62.83 2 0.00068436 19629 20230619_1880_Aki_TMTPro18x_K_F1 80.067 59.31 162840 139490 130900 165290 190230 158190 169450 165110 174290 180110 196840 179300 177140 152350 189870 208930 185680 198180 150380 127900 136660 164700 191990 160830 172200 168650 178250 181160 199960 181280 182010 161020 192730 208390 177790 188300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281590000 18825 4005 17687 35731;35732 28618;28619 28618 2639;2640 2 9606 Homo sapiens 0.06149895907424252 MMPTPVILLK Acetyl (Protein N-term);Oxidation (M) 1199.6658 0.66578826 4005 Q53HV2;Q99832;Q6IBT3;F8WBP8 CCT7 T-complex protein 1 subunit eta yes no 1 1 0 2 0.756 2 3 2 64.966 64.976 2 0.00067024 20661 20230619_1881_Aki_TMTPro18x_K_F2 95.85 75.093 208400 191000 197220 205470 189470 228010 218920 207820 230200 248740 262890 248100 268350 229180 256850 278750 257470 287210 192760 174940 201230 206680 198360 228430 219420 214830 235260 249170 268360 251350 273130 239670 261550 279730 246540 272590 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1108900000 18826 4005 17687 35733;35734;35735;35736;35737;35738;35739 28620;28621;28622;28623;28624;28625;28626 28623 2639;2640 7 9606 Homo sapiens 0.07394199770033083 MMPTPVILLK Acetyl (Protein N-term) 1183.6709 0.67087364 4005 Q53HV2;Q99832;Q6IBT3;F8WBP8 CCT7 T-complex protein 1 subunit eta yes no 1 0 0 3 1.41 1 1 1 1 1 66.951 66.972 2 0.0011671 21326 20230619_1882_Aki_TMTPro18x_K_F3 77.789 45.658 220460 199480 233770 216910 129470 216740 222430 224420 239150 279350 239230 247760 291630 226990 262900 301370 296450 312650 204090 182740 234790 217790 145760 219250 219550 230190 242930 278330 247830 252230 294510 238940 269900 302150 283430 296780 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 946190000 18827 4005 17687 35740;35741;35742;35743;35744 28627;28628 28628 2 9606 Homo sapiens 0.08638503632664651 MMRPVSDQVQIK Oxidation (M) 1446.7323 0.7323047 4319 Q96A33;Q96A33-2 CCDC47 Coiled-coil domain-containing protein 47 yes no 0 1 1 1.5 0.5 1 1 42.761 42.801 3 0.032879 11341 20230619_1880_Aki_TMTPro18x_K_F1 60.345 38.714 66670 47739 60828 74255 77053 83510 85337 81329 90840 69388 79363 73132 81469 65010 73729 78796 92318 78552 61555 43938 62614 72880 78965 83655 85695 82933 91698 70917 82021 73854 82710 68076 76155 78937 88054 74662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82337000 18828 4319 17688 35745;35746 28629 28629 2729;2730 1 9606 Homo sapiens 0.026807835939962388 MMRPVSDQVQIK 2 Oxidation (M) 1462.7272 0.72721932 4319 Q96A33;Q96A33-2 CCDC47 Coiled-coil domain-containing protein 47 yes no 0 2 1 8 0 1 38.742 38.729 3 0.021554 8964 20230619_1888_Aki_TMTPro18x_K_F8 59.57 37.095 54551 45588 50025 58682 75427 58539 61424 68134 77898 62550 62634 54731 64517 46645 68014 72149 63500 55429 50414 41841 51594 58185 75801 59487 63251 68767 77808 63287 65024 55710 65900 49750 68872 71147 60744 52853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153070000 18829 4319 17688 35747 28630 28630 2729;2730 1 9606 Homo sapiens 0.014364797313874078 MMTKEELEEEQR Unmodified 1551.6909 0.69089339 1537;3770 A0A481SVA1;P84157;A0A481SVJ4;A0A481SVD9;P84157-3;A0A481SU50;A0A481SVT9;K7EPS4;P84157-2;K7EQX8;Q6ZR64 MXRA7 Matrix-remodeling-associated protein 7 no no 0 0 1 3 0 1 45.037 45.11 3 0.041069 11891 20230619_1882_Aki_TMTPro18x_K_F3 52.132 38.453 68360 52187 71977 67981 70475 84128 84089 76666 89203 93737 105160 96057 87364 72211 95337 81099 96525 79459 63212 47920 72786 67573 73716 83651 84158 79299 91207 93872 106320 96585 90079 75748 96785 81325 92225 75551 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24124000 18830 1537;3770 17689 35748 28631 28631 1 9606 Homo sapiens -0.06288441956007773 MMTKEELEEEQRTEE Oxidation (M) 1926.8187 0.81867268 3770 P84157-2;K7EQX8;Q6ZR64 MXRA7 Matrix-remodeling-associated protein 7 yes no 0 1 2 1 0 1 42.983 42.983 3 1.8404E-07 11423 20230619_1880_Aki_TMTPro18x_K_F1 121.82 112.16 68858 62082 78181 80543 66221 63349 83750 77131 75756 99491 115710 98720 91285 76086 117790 79858 80403 61449 63783 56968 78471 79618 70053 65715 83229 78485 79254 99243 115710 99480 95111 79403 117040 79315 77160 58629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63532000 18831 3770 17690 35749 28632 28632 2454 1 9606 Homo sapiens -0.10766390943308579 MMTLHQQCIR 2 Oxidation (M) 1348.605 0.60499569 618 A0A024RAC6;Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes no 0 2 0 8 0 1 29.895 29.911 3 0.028141 5592 20230619_1888_Aki_TMTPro18x_K_F8 50.292 41.563 6272.6 5170.1 4839.4 6212.1 6887.1 4743.1 7160.9 7505 9467.7 5061.6 4834.2 3860.4 6304.7 4019.7 5314.7 6151.5 7005.7 5496.7 5789.4 4742.1 5071.6 6171.1 6983.2 4978.9 7269.6 7410.4 9318.1 5215.8 5235.3 3988.7 6336.4 4260.8 5518.8 6107.6 6676.2 5233.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2637300 18832 618 17691 35750 28633 28633 354;355 1 9606 Homo sapiens -0.05536260551843952 MMVADVFSHR Unmodified 1191.5529 0.55288377 2370 B3KP28;B4DGK3;G5E9A6;Q6P453;P51784 USP11 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 11 yes no 0 0 0 1 0 1 51.705 51.705 3 0.017216 15050 20230619_1880_Aki_TMTPro18x_K_F1 57.348 42.376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18833 2370 17692 35751 28634 28634 1 9606 Homo sapiens -0.03523055903315253 MMVAGFK Oxidation (M) 798.37682 0.37681688 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 1 0 2.75 0.829 2 1 1 49.247 49.307 2 0.030134 13640 20230619_1881_Aki_TMTPro18x_K_F2 90.939 61.097 1057100 844230 889020 1020100 1141700 1312500 1157200 1076700 1403600 713090 754670 660100 784420 628500 940610 896400 855770 734670 976080 774470 921810 1019200 1167500 1299400 1172600 1106800 1387900 740190 805980 672690 807100 663510 948750 887630 818780 699950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 703740000 18834 3776 17693 35752;35753;35754;35755 28635;28636 28635 2462;2463 2 9606 Homo sapiens -0.030436453465767954 MMVAGFK Unmodified 782.3819 0.38190226 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 3.5 0.5 1 1 54.033 54.067 3 0.032847 15813 20230619_1883_Aki_TMTPro18x_K_F4 62.715 27.615 169220 134520 164920 165410 150360 210020 187680 178310 207720 141170 141570 131560 157920 127350 158750 160530 152770 144430 156410 123430 167750 165090 158700 208120 187650 183380 207630 144530 149060 133980 160670 133280 161090 159890 146170 137380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113460000 18835 3776 17693 35756;35757 28637;28638 28638 2 9606 Homo sapiens -0.017993414839679645 MMVAGFKK Unmodified 910.47687 0.47686528 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 1 5.5 0.5 1 1 49.454 49.531 3 0.0016392 13722 20230619_1886_Aki_TMTPro18x_K_F6 114.78 52.069 167470 215950 183180 138260 212720 189920 192400 198670 172150 61841 60678 49330 59330 43889 100660 60727 71925 47606 155530 196900 184890 147140 217590 188710 194560 198630 171800 69581 67508 50637 62552 46365 99816 60155 68927 45444 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113820000 18836 3776 17694 35758;35759 28639 28639 1 9606 Homo sapiens 0.01804591987229287 MNAGSDPVVIVSAAR Acetyl (Protein N-term) 1527.7715 0.77152697 2058 A8K4W5;Q59GW6;Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes no 1 0 0 3.5 0.5 1 1 59.188 59.217 2 3.3723E-28 17959 20230619_1883_Aki_TMTPro18x_K_F4 151.79 141.08 22463 17123 21638 24032 18882 23859 21557 21671 21838 25195 30974 27194 29191 24042 27440 20942 22788 24953 20756 15736 22024 23691 19925 24077 21608 22392 22598 25328 31246 27407 29743 24749 27641 21346 21864 23650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14291000 18837 2058 17695 35760;35761 28640;28641 28641 2 9606 Homo sapiens 0.028752071492135656 MNAPPAFESFLLFEGEK Acetyl (Protein N-term) 1967.9339 0.93390085 982 D6RAG0;Q86UW4;E7EP90;A0A0B4J2F8;A0A0B4J1Z8;Q9H1A6;F8WF84;Q8TDE6;E2QRJ6;A6NFM0;E7EWC6;Q9H1A7;Q9GZM3;Q9GZM3-2;P52435 POLR2J3;POLR2J2;POLR2J1;POLR2J DNA-directed RNA polymerase II subunit RPB11-b2;DNA-directed RNA polymerase II subunit RPB11-b1;DNA-directed RNA polymerase II subunit RPB11-a yes no 1 0 0 5 0 1 68.508 68.55 3 0.0036215 21570 20230619_1885_Aki_TMTPro18x_K_F5 56.215 48.11 7495.6 5065.3 4949.6 6660.2 3253.4 6498.4 7832.8 6499.8 9199.9 8475.3 8688.4 9779.2 8037.4 8084.3 8035.2 11706 10666 10575 6904 4654.1 5230.7 6590.1 3666.7 6575.1 7667.4 6698.5 9266.9 8501.2 8918 9812.5 8236.7 8577.6 8336.7 11631 10179 10057 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12369000 18838 982 17696 35762 28642 28642 1 9606 Homo sapiens -0.01134873959313154 MNAPPAFESFLLFEGEK Acetyl (Protein N-term);Oxidation (M) 1983.9288 0.92881548 982 D6RAG0;Q86UW4;E7EP90;A0A0B4J2F8;A0A0B4J1Z8;Q9H1A6;F8WF84;Q8TDE6;E2QRJ6;A6NFM0;E7EWC6;Q9H1A7;Q9GZM3;Q9GZM3-2;P52435 POLR2J3;POLR2J2;POLR2J1;POLR2J DNA-directed RNA polymerase II subunit RPB11-b2;DNA-directed RNA polymerase II subunit RPB11-b1;DNA-directed RNA polymerase II subunit RPB11-a yes no 1 1 0 5 0 1 67.39 67.432 2 0.0013004 21126 20230619_1885_Aki_TMTPro18x_K_F5 41.54 38.562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18839 982 17696 35763 28643 28643 547 1 9606 Homo sapiens -0.023791778219447224 MNAQETATGMAFEEPIDEK Unmodified 2110.9187 0.91872108 2579 B4DRS4;O43719 HTATSF1 HIV Tat-specific factor 1 yes no 0 0 0 3 0 1 57.474 57.507 3 6.6672E-11 17408 20230619_1882_Aki_TMTPro18x_K_F3 141.6 132.32 18958 17053 18210 20498 17154 23091 20883 21485 26185 20003 22519 23155 23885 19954 22491 26935 24836 25620 17535 15636 18565 20451 18044 23106 21003 22022 26205 20404 23342 23270 24270 21055 23049 26868 23746 24345 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31697000 18840 2579 17697 35764 28644 28644 1 9606 Homo sapiens -0.09230153609451008 MNDDATQQLVHR Oxidation (M) 1442.6572 0.6572255 2682 B7Z370;Q96A23;Q96A23-2 CPNE4 Copine-4 yes no 0 1 0 3 0 1 33.837 33.903 3 0.0051291 7128 20230619_1882_Aki_TMTPro18x_K_F3 71.548 60.938 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18841 2682 17698 35765 28645 28645 1613 1 9606 Homo sapiens -0.046396826129239344 MNDTVTIR Acetyl (Protein N-term);Oxidation (M) 1006.4753 0.47534495 1364 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4 RPS24 40S ribosomal protein S24 yes no 1 1 0 1 0 1 37.308 37.308 2 0.0012163 8898 20230619_1880_Aki_TMTPro18x_K_F1 124.83 73.869 38268 32401 39054 43229 53768 63420 54715 57476 68654 44128 53442 55404 51364 49308 50001 46858 65448 59703 35399 29747 39868 43015 54757 62432 55521 58748 68454 45706 55472 55529 52488 50922 51698 47862 62431 56591 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48827000 18842 1364 17699 35766 28646 28646 858 1 9606 Homo sapiens -0.027633705678340448 MNDTVTIR Acetyl (Protein N-term) 990.48043 0.48043033 1364 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4 RPS24 40S ribosomal protein S24 yes no 1 0 0 1.5 0.5 1 1 45.92 45.961 2 0.00066789 12682 20230619_1880_Aki_TMTPro18x_K_F1 114.78 66.279 45825 43821 47314 47436 57381 65163 57565 65544 63667 49786 63058 56149 60207 53715 53720 63725 54889 46297 42429 40134 48098 47866 58820 64555 58239 66468 64431 51372 64550 56705 61243 55968 54859 62888 52447 44189 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204140000 18843 1364 17699 35767;35768 28647;28648 28647 2 9606 Homo sapiens -0.015190667052252138 MNEAFGDTK Unmodified 1011.4331 0.43314579 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 3 0 1 46.646 46.725 2 0.0022212 12660 20230619_1882_Aki_TMTPro18x_K_F3 108.47 67.483 59739 49199 58934 59274 61707 66279 69560 68641 84416 78636 87692 96988 94069 75714 74659 81230 106650 94934 55235 45127 59981 59144 64090 66555 70141 70231 85270 79493 90135 96852 94882 79122 78051 82295 101650 90066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29293000 18844 2263 17700 35769 28649 28649 1 9606 Homo sapiens -0.0721134597620221 MNFESFVK Unmodified 1000.4688 0.46880301 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;V9H023;V9H0D5;V9H0B2;V9H015;V9H062;Q0ZAJ2 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 4.5 3.5 1 1 59.622 59.641 2 0.0036699 18320 20230619_1880_Aki_TMTPro18x_K_F1 129.42 36.226 121910 111050 117290 113800 90951 110080 116060 115000 118670 139960 131250 120590 158920 122170 137420 153090 128610 148810 112770 101670 119120 114750 97298 111750 115710 117810 121380 139480 135220 123410 160180 127690 139730 153060 123280 141310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97450000 18845 3585 17701 35770;35771 28650;28651 28650 2 9606 Homo sapiens -0.03141263728537069 MNGPEDLPK Acetyl (Protein N-term);Oxidation (M) 1057.475 0.4750106 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;E9PKD3;A0A0B4J225;E9PIZ5;E9PKI4;E9PLT3;E9PQI3 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 1 1 0 1 0 1 45.946 45.946 2 0.00050378 12711 20230619_1880_Aki_TMTPro18x_K_F1 98.392 80.357 28282 22648 30682 31098 31183 38508 34425 29337 36101 36463 44120 35589 41928 34614 38214 38109 45855 42034 26166 20804 30986 30795 32459 38151 34575 30810 36993 36458 44734 36168 42679 35938 39343 38462 43773 39897 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24516000 18846 682 17702 35772 28652 28652 419 1 9606 Homo sapiens -0.05142790287709431 MNHHPEWFNVYNK Oxidation (M) 1730.7624 0.76235927 3036 H0YA52;Q9H0N5 PCBD2 Pterin-4-alpha-carbinolamine dehydratase 2 yes no 0 1 0 1 0 1 45.017 45.017 4 0.083149 12311 20230619_1880_Aki_TMTPro18x_K_F1 45.79 38.42 34862 24730 34889 35534 37086 43771 35884 38012 54365 29021 34398 32042 34603 29561 35714 36096 48882 37919 32209 22739 35477 35092 38374 43482 36817 38987 53453 29963 36226 32342 35393 30922 37019 36269 46567 36036 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19242000 18847 3036 17703 35773 28653 28653 1787 1 9606 Homo sapiens -0.07379141416481616 MNIFGGFR Unmodified 940.45891 0.45890703 2648 B7ZB41;B4E290;Q6NUK1-2;Q6NUK1 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes no 0 0 0 6 0 1 59.096 59.161 2 0.0035472 17771 20230619_1886_Aki_TMTPro18x_K_F6 119.07 105.56 141320 123000 141850 149160 137860 187870 162730 165600 184660 152870 150670 157040 184390 152520 152390 170510 168840 178860 130730 112800 144090 148990 144470 186430 163310 170350 185480 155400 157700 159110 185590 158470 156530 171480 161460 169750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97173000 18848 2648 17704 35774 28654 28654 1 9606 Homo sapiens -0.013704069432606047 MNIMDFNVK Acetyl (Protein N-term) 1152.5308 0.53075134 828 A0A140VJU5;A0A994J549;A0A087WW40;Q9Y371;Q9Y371-2 SH3GLB1 Endophilin-B1 yes no 1 0 0 6 0 1 65.165 65.21 2 0.001418 20418 20230619_1886_Aki_TMTPro18x_K_F6 78.496 66.649 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18849 828 17705 35775 28655 28655 1 9606 Homo sapiens -0.03941280371736866 MNLFNLDR Acetyl (Protein N-term) 1063.5121 0.51206481 4516 Q9H4L7;Q9H4L7-2;D6RAY8;F8W9M2 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 1 0 0 5 0 1 64.802 64.846 2 0.014427 20111 20230619_1885_Aki_TMTPro18x_K_F5 86.833 68.102 7625.9 6971.3 6265.6 9502.3 6351.5 8018.3 6958.5 7321 8641.3 7365.2 8309.5 11289 10016 9301.3 10133 10217 11067 14193 7046.2 6400.2 6499.4 9361.1 6621.1 8201.2 7034.5 7536 8691.9 7562.8 8638.8 11207 10181 9708.5 10354 10474 10601 13427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14605000 18850 4516 17706 35776 28656 28656 1 9606 Homo sapiens -0.017150739512771906 MNLPGEVTFLPLNK Oxidation (M) 1587.8331 0.8330646 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 1 0 1.5 0.5 1 1 62.013 62.018 3 0.0033255 19505 20230619_1881_Aki_TMTPro18x_K_F2 70.373 49.127 136520 113830 131050 132240 122130 133010 121010 135240 136990 140780 140680 147620 145860 148600 161000 179880 160710 162360 126210 104370 133430 132100 127550 134530 122680 138140 138870 142180 144490 149640 149590 154760 163540 179240 153780 154390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 205740000 18851 4191 17707 35777;35778 28657;28658 28658 2699 2 9606 Homo sapiens 0.0626613884849121 MNLPGEVTFLPLNK Unmodified 1571.8381 0.83814998 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 3 0 1 63.36 63.391 3 1.863E-08 19831 20230619_1882_Aki_TMTPro18x_K_F3 145.6 124.76 78080 59660 88610 92709 68057 88033 89524 92736 97174 107220 100600 90193 106390 90121 97493 103230 114170 99315 72249 54894 88871 90819 72961 89411 89309 94796 98758 107040 103240 92355 107980 93678 100240 103300 108970 94426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163460000 18852 4191 17707 35779 28659 28659 1 9606 Homo sapiens 0.07510442711122778 MNLSAIQDR Oxidation (M) 1062.5128 0.51279309 559 A0A024R977;Q96BM9;B2R7U5;B4DQT8;B4E1J8;Q9NVJ2 ARL8A;ARL8B ADP-ribosylation factor-like protein 8A;ADP-ribosylation factor-like protein 8B yes no 0 1 0 4.5 0.5 1 1 38.401 38.469 2 0.0041802 8914 20230619_1885_Aki_TMTPro18x_K_F5 93.325 68.43 57185 43610 47093 62872 76730 68620 54973 54275 61704 45762 52629 47356 52329 44442 54768 58417 53658 50401 52777 40090 49188 61927 76680 68650 56890 56237 62101 46799 54391 47966 53535 46664 55608 58024 51328 47968 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105040000 18853 559 17708 35780;35781 28660 28660 324 1 9606 Homo sapiens -0.015962793022481492 MNLSEEVDLEDYVARPDK Unmodified 2121.9888 0.98884955 2016 A8K2M0;P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 1 5 0 1 60.102 60.154 3 3.0162E-07 17959 20230619_1885_Aki_TMTPro18x_K_F5 122.19 98.863 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18854 2016 17709 35782 28661 28661 1 9606 Homo sapiens -0.027265319493380957 MNNGDVDLTSDR Oxidation (M) 1351.5674 0.56740744 120 A0A024R104;Q12860-2;Q12860;Q12860-3;F8VUI9 CNTN1 Contactin-1 yes no 0 1 0 1 0 1 36.593 36.593 2 1.1966E-06 8605 20230619_1880_Aki_TMTPro18x_K_F1 141.08 117.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18855 120 17710 35783 28662 28662 51 1 9606 Homo sapiens -0.09431357012135777 MNNSGADEIGK Acetyl (Protein N-term);Oxidation (M) 1192.503 0.50301627 1118 K7EQ55;K7EK33;A0A0S2Z569;Q96EP5-2;Q96EP5;K7EQ02;Q5IRN2 DAZAP1;DAZAP1/MEF2D fusion DAZ-associated protein 1 yes no 1 1 0 1 0 1 41.212 41.212 2 1.4291E-12 10604 20230619_1880_Aki_TMTPro18x_K_F1 159.37 134.45 73981 65407 76945 88374 107290 110280 96881 96519 119940 112690 102200 118200 121860 97971 109340 125240 139070 120770 68465 60050 78437 87605 108720 109550 98971 99974 120250 113210 106670 119000 123160 103180 113120 125120 132650 114820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201000000 18856 1118 17711 35784 28663 28663 701 1 9606 Homo sapiens -0.08553512098251304 MNNSGADEIGK Acetyl (Protein N-term) 1176.5081 0.50810164 1118 K7EQ55;K7EK33;A0A0S2Z569;Q96EP5-2;Q96EP5;K7EQ02;Q5IRN2 DAZAP1;DAZAP1/MEF2D fusion DAZ-associated protein 1 yes no 1 0 0 1.5 0.5 1 1 47.197 47.235 2 8.1039E-17 13193 20230619_1880_Aki_TMTPro18x_K_F1 135.79 125.03 98484 83814 102650 103090 123140 135300 112590 102350 138340 126340 143770 140060 156740 119280 134700 156000 169440 160360 91120 76884 104230 102930 126020 133630 114920 107510 139680 126880 147770 140920 158450 125730 139390 156350 161720 152300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 219700000 18857 1118 17711 35785;35786 28664;28665 28664 2 9606 Homo sapiens -0.07309208235642473 MNNVNVVYTPWSNLK Oxidation (M) 1793.8771 0.87705468 4176 Q7Z5U5;Q86WR0;Q6PK69;Q86WR0-2 CCDC25 Coiled-coil domain-containing protein 25 yes no 0 1 0 4 0 1 60.715 60.717 3 8.24E-06 18610 20230619_1883_Aki_TMTPro18x_K_F4 112.72 95.844 20590 21722 26475 24685 25704 26566 25133 24530 29803 20416 24604 22195 23629 21301 26826 26969 24491 27729 19118 19897 26378 24721 26720 26685 25526 25098 29857 20929 25439 22450 24307 22298 27096 27052 23478 26318 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16535000 18858 4176 17712 35787 28666 28666 2690 1 9606 Homo sapiens 0.011871232748262628 MNPAAEAEFNILLATDSYK Acetyl (Protein N-term) 2139.0194 0.019421398 426 P43490;A0A024R718;A0A7P0T9I9;A0A7P0T895;A0A7P0T8L3;A0A7P0T973;A0A7P0TAS5;A0A7P0T862;A0A7P0T8D2;A0A0C4DFS8;A0A7P0TA73;A0A7P0TBB7;A0A7P0T941;A0A7P0Z466;B7Z8W6;A0A7P0Z4N0;A0A7P0T9F0;A0A7P0TB17;A0A7P0T8Z3;A0A7P0T8R4;A0A7P0TAI8;A0A7P0Z4L4;C9JG65;C9JF35;A0A7P0TAZ2 NAMPT;PBEF1 Nicotinamide phosphoribosyltransferase yes no 1 0 0 5 0 1 67.903 67.946 3 5.7046E-07 21325 20230619_1885_Aki_TMTPro18x_K_F5 46.621 31.699 9217.5 6748.1 7661.7 10463 7677.3 8049 10015 8075.3 7896.8 10745 9224.9 12405 9549.1 11558 12196 10306 9993 12159 8505.7 6209.9 7930.1 10221 8028.8 8321.6 9894.2 8332.2 8232.8 10762 9447.9 12471 9881.8 11870 12224 10489 9597.5 11521 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16566000 18859 426 17713 35788 28667 28667 1 9606 Homo sapiens -0.004527535643319425 MNPEYDYLFK Acetyl (Protein N-term);Oxidation (M) 1376.5959 0.59585402 4495 Q9H0U4;E9PLD0;Q6FIG4;Q9H1C9 RAB1B Ras-related protein Rab-1B yes no 1 1 0 3 0.816 1 1 1 63.272 63.288 2 1.1977E-05 19788 20230619_1882_Aki_TMTPro18x_K_F3 96.711 78.096 493760 420920 447790 524520 505740 535570 507710 526620 537210 647480 690950 691420 691450 621360 621400 785370 692160 789860 456330 386170 459990 521270 520690 540630 512960 541860 552250 648990 701680 697760 702550 651780 637990 786340 662250 749810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1042399999.9999999 18860 4495 17714 35789;35790;35791 28668;28669;28670 28669 2794 3 9606 Homo sapiens -0.07738007364901023 MNPEYDYLFK Acetyl (Protein N-term) 1360.6009 0.6009394 4495 Q9H0U4;E9PLD0;Q6FIG4;Q9H1C9 RAB1B Ras-related protein Rab-1B yes no 1 0 0 5 1.41 1 1 1 1 1 64.939 64.971 2 0.00012471 20517 20230619_1882_Aki_TMTPro18x_K_F3 86.011 72.958 404610 309040 354660 393850 259310 391160 373830 398640 426310 589940 537150 568860 605390 510180 513480 640030 612110 671130 373590 283710 363360 390730 280970 395670 372180 411760 436510 585000 549040 576280 611340 535210 529920 642420 585120 636900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 785490000 18861 4495 17714 35792;35793;35794;35795;35796 28671;28672;28673;28674 28672 4 9606 Homo sapiens -0.06493703502269454 MNPGDLQWMTAGR Unmodified 1475.665 0.66495341 698 A0A024RBX6;O00625 PIR Pirin yes no 0 0 0 2 0 1 59.193 59.205 2 1.0013E-05 18288 20230619_1881_Aki_TMTPro18x_K_F2 134.75 113.38 28417 22436 28641 26424 24765 29748 31848 31434 37135 34459 32156 28238 37543 33506 31972 40081 37801 34186 26272 20578 29009 26418 26242 29864 31866 32068 37336 34489 33434 29157 37900 34728 32974 39821 36086 32545 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9233900 18862 698 17715 35797 28675 28675 1 9606 Homo sapiens -0.053852466169701074 MNPIVVVHGGGAGPISK Acetyl (Protein N-term) 1673.8923 0.89231081 323 A0A024R573;Q7L266;B3KR33;E9PJK6;A0A087WUG3 ASRGL1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes no 1 0 0 1 0 1 56.757 56.757 3 2.9671E-05 17154 20230619_1880_Aki_TMTPro18x_K_F1 51.535 37.572 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18863 323 17716 35798 28676 28676 1 9606 Homo sapiens 0.08232034862703586 MNPVYSPGSSGVPYANAK Acetyl (Protein N-term) 1879.8774 0.87744861 22 A0A024QZ31;A1KXE4-2;A1KXE4 LOC130074;FAM168B Myelin-associated neurite-outgrowth inhibitor yes no 1 0 0 8 0 1 59.266 59.308 2 0.00059046 17519 20230619_1888_Aki_TMTPro18x_K_F8 67.456 58.452 4579.4 4212.3 3471.7 4699.9 2345.1 3549.7 3477 2634.9 3663.3 4943.3 5841 4391.7 6332.1 5976.3 5200.3 6097.7 5327.1 6690.7 4229.2 3859.3 3610 4689.9 2565.8 3656.2 3447.2 2822.7 3811 4857.6 5901 4544 6395.3 6118.5 5320.5 6156.5 5105.1 6343.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3765500 18864 22 17717 35799 28677 28677 1 9606 Homo sapiens -0.027295017959659162 MNREEILAFIK Unmodified 1362.733 0.73295662 3645 Q5T4U8;Q59GT6;Q6IB63;P53611 RABGGTB Geranylgeranyl transferase type-2 subunit beta yes no 0 0 1 2 0 1 59.227 59.239 3 0.00084205 18329 20230619_1881_Aki_TMTPro18x_K_F2 94.538 59.854 105110 87576 95532 97202 68529 88660 93709 84908 111390 118060 101310 103270 132620 103020 107830 149600 125110 146670 97133 80262 97456 97303 74143 90228 93587 87933 112170 117100 105790 105550 133140 108810 111280 149270 119680 139260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14391000 18865 3645 17719 35800 28678 28678 1 9606 Homo sapiens 0.06609946305343328 MNRPAPVEISYENMR Acetyl (Protein N-term);Oxidation (M) 1863.8608 0.86075269 3826 Q12974-3;Q12974;Q12974-4;E9PL34;E9PMY3;E9PML8;E9PJC0;E9PRR9;Q12974-2 PTP4A2 Protein tyrosine phosphatase type IVA 2 yes no 1 1 1 4 0 1 45.843 45.887 2 6.0315E-05 12107 20230619_1883_Aki_TMTPro18x_K_F4 97.163 90.034 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18866 3826 17720 35801 28679 28679 2509 1 9606 Homo sapiens -0.03662325953564505 MNSGPPGLGGK Oxidation (M) 1029.4913 0.49132937 3912 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog yes yes 0 1 0 8 0 1 40.845 40.837 2 0.00075314 9827 20230619_1888_Aki_TMTPro18x_K_F8 104.43 74.359 29918 21328 24743 26078 30570 33314 33669 29928 36940 35494 35096 32941 37069 24316 33759 40341 38739 39484 27602 19577 25664 26040 31384 33062 33852 30958 37380 35497 36168 33283 37570 26251 34698 40207 37022 37508 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24526000 18867 3912 17721 35802 28680 28680 2590 1 9606 Homo sapiens -0.022236643309042847 MNVDQAFHELVR Unmodified 1457.7085 0.70853279 2927 E9PK85;P62070-2;P62070-3;P62070;P62070-4 RRAS2 Ras-related protein R-Ras2 yes no 0 0 0 6.5 0.5 1 1 55.867 55.933 3 2.8087E-13 16147 20230619_1887_Aki_TMTPro18x_K_F7 177.41 151.96 49016 38635 42690 40064 36885 49247 44637 44836 56247 46565 44289 49438 49845 39607 45317 56095 47251 55614 45265 35395 43798 40492 39083 48995 44919 46150 56148 47074 46282 49726 50470 42063 46332 56042 45249 52797 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 294740000 18868 2927 17722 35803;35804 28681 28681 1 9606 Homo sapiens -0.0020131384817432263 MNVFDTELK Unmodified 1095.527 0.52704617 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 0 0 6.5 0.5 1 1 58.62 58.677 3 0.00018282 17487 20230619_1886_Aki_TMTPro18x_K_F6 123.86 55.129 38817 34912 39682 44483 36013 43173 46982 49306 57808 50318 43962 41050 56719 41417 45836 45879 47423 42864 35922 32031 40222 44123 38027 43885 47066 49963 57728 50530 46290 42108 56921 42986 46884 45872 45327 40761 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179750000 18869 1076 17723 35805;35806 28682 28682 1 9606 Homo sapiens -0.01689626873940142 MNVGTAHSEVNPNTR Acetyl (Protein N-term);Oxidation (M) 1683.7635 0.76348148 168 A0A024R1W6;Q8N138-4;Q8N138;J3QRM9 ORMDL3 ORM1-like protein 3 yes no 1 1 0 1.5 0.5 1 1 30.175 30.209 2 1.9043E-14 5815 20230619_1881_Aki_TMTPro18x_K_F2 147.62 139.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17395000 18870 168 17724 35807;35808 28683 28683 110 1 9606 Homo sapiens -0.051049718382046194 MNVGTAHSEVNPNTR Acetyl (Protein N-term) 1667.7686 0.76856686 168 A0A024R1W6;Q8N138-4;Q8N138;J3QRM9 ORMDL3 ORM1-like protein 3 yes no 1 0 0 2.5 0.5 1 1 36.603 36.659 2 1.3903E-37 8237 20230619_1882_Aki_TMTPro18x_K_F3 153.54 143.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18871 168 17724 35809;35810 28684;28685 28685 2 9606 Homo sapiens -0.038606679755957884 MNVGVAHSEVNPNTR Acetyl (Protein N-term);Oxidation (M) 1681.7842 0.78421693 1280 F6WST4;A0A1B0GXE7;Q9P0S3;Q53FV1 ORMDL1;ORMDL2 ORM1-like protein 1;ORM1-like protein 2 yes no 1 1 0 2 0 1 33.411 33.469 2 2.0779000000000003E-25 7063 20230619_1881_Aki_TMTPro18x_K_F2 194.17 175.49 0 1001.9 1426.1 0 815.32 1129.5 1027.2 777.68 1111.7 1066.8 818.03 0 1875.9 879.09 0 0 0 0 0 906.49 1312.8 0 898.65 1050.4 1026.7 824.49 1117.6 1032 891.11 0 1785.8 836.03 0 0 0 0 0 1 1 0 1 1 1 1 1 1 1 0 1 1 0 0 0 0 18631000 18872 1280 17725 35811 28686 28686 805 1 9606 Homo sapiens -0.029403814585521104 MNVGVAHSEVNPNTR Acetyl (Protein N-term) 1665.7893 0.7893023 1280 F6WST4;A0A1B0GXE7;Q9P0S3;Q53FV1 ORMDL1;ORMDL2 ORM1-like protein 1;ORM1-like protein 2 yes no 1 0 0 3 0 1 39.967 40.024 2 3.8459E-33 9594 20230619_1882_Aki_TMTPro18x_K_F3 157.68 143 7990.4 6524.1 8664.5 11710 11579 12470 12300 10067 14349 10731 15179 15586 14305 12514 12766 14646 19166 14084 7393.5 6013.1 8809.8 11393 11812 12490 12414 10481 14515 10967 15498 15503 14564 13115 13369 14648 18241 13401 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44508000 18873 1280 17725 35812 28687 28687 1 9606 Homo sapiens -0.01696077595920542 MNVIDHVR Acetyl (Protein N-term);Oxidation (M) 1040.5073 0.50731378 679 B3KMP2;A8KAQ7;A5D8X2;A0A024RBJ3;Q9UJX3-2;Q9UJX3;H0YIX7 ANAPC7 Anaphase-promoting complex subunit 7 yes no 1 1 0 2 0 1 37.084 37.145 2 0.0055805 8549 20230619_1881_Aki_TMTPro18x_K_F2 68.081 58.331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18874 679 17726 35813 28688 28688 416 1 9606 Homo sapiens -0.011319580940153173 MNVLADALK Unmodified 973.52665 0.52665224 3065;2214 H3BN98;I3L246;H3BV27;H3BT37;I3L303;I3L3P7;B2R4W8;P62244;A8K7H3 RPS15A;hCG_1994130 40S ribosomal protein S15a no no 0 0 0 3.67 3.09 1 1 1 60.587 60.602 3 8.9645E-05 18727 20230619_1880_Aki_TMTPro18x_K_F1 140.11 92.455 260960 236840 218920 224120 278070 462810 304240 299100 474940 25715 24580 27570 29570 25386 75464 35471 34205 27785 241150 216710 227050 230510 286540 445710 310020 309440 454680 41761 46726 28094 32416 26776 73427 35184 33082 26495 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 268570000 18875 3065;2214 17727 35814;35815;35816 28689;28690;28691 28689 3 9606 Homo sapiens 0.03882998196877452 MNVQVTQHR Unmodified 1111.5557 0.55566096 2068 D6W5H1;A8K583;Q14966-4;Q14966-3;Q14966;B4DF54;Q14966-2;Q14966-6;C9JWN0 ZNF638 Zinc finger protein 638 yes no 0 0 0 1 0 1 32.705 32.705 3 0.00074797 7067 20230619_1880_Aki_TMTPro18x_K_F1 104.48 78.545 10361 9340.6 13480 12912 21423 19481 16364 21213 18249 11118 15871 21856 16247 16235 15989 13288 19452 16471 9610.4 8577.1 13545 12834 21447 19242 16861 21263 18369 12105 16456 21494 16579 16758 16437 13593 18558 15621 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21781000 18876 2068 17728 35817 28692 28692 1 9606 Homo sapiens 0.0043453554587813414 MNVSPDVNYEELAR Unmodified 1635.7563 0.75627084 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PM69 PSMC3 26S protease regulatory subunit 6A yes no 0 0 0 3.5 0.5 1 1 54.141 54.172 2 1.6602E-28 15869 20230619_1883_Aki_TMTPro18x_K_F4 256.95 241.8 99641 73730 83402 89136 74959 104890 97422 99033 114960 129710 113240 123430 140920 114720 101690 158400 126190 138750 91956 67659 86014 88965 79369 104680 97479 102370 116180 129240 117510 125300 141060 120940 105770 157200 120580 131950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171530000 18877 4761 17729 35818;35819 28693;28694 28694 2 9606 Homo sapiens -0.03617704438602232 MNYSDAIVWLK Unmodified 1338.6642 0.66420836 3265 O43776;B4DN60 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 0 2 0 1 63.258 63.266 3 0.0011609 20095 20230619_1881_Aki_TMTPro18x_K_F2 89.283 45.095 34474 31721 35029 35977 30437 37553 37194 38133 37221 35781 36355 31445 37013 31082 39617 36426 36348 33303 31906 29067 35480 36018 32181 37865 37127 38851 37882 36156 37352 32132 37871 32360 40040 36359 34788 31676 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45581000 18878 3265 17730 35820 28695 28695 1 9606 Homo sapiens 0.008422820056011915 MNYSGDQGQTIR Oxidation (M) 1384.6041 0.60412729 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;Q5T4S7-5 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 1 0 3.5 0.5 1 1 33.7 33.759 2 0.001974 7036 20230619_1883_Aki_TMTPro18x_K_F4 91.313 76.647 16433 11654 17215 16543 18228 16878 20177 19897 20545 18958 24438 23794 23861 19924 20260 27025 29772 23842 15188 10714 17431 16312 18872 17114 20248 20096 21052 19353 24858 23827 24207 21046 21225 26845 28353 22701 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25318000 18879 4061 17731 35821;35822 28696 28696 2662 1 9606 Homo sapiens -0.0727906039555819 MNYSGDQGQTIR Unmodified 1368.6092 0.60921267 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;Q5T4S7-5 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 5 0 1 39.055 39.147 2 0.00068062 9189 20230619_1885_Aki_TMTPro18x_K_F5 116.55 90.032 14036 11335 12130 11559 12950 14637 12488 11170 14353 19585 17285 16765 19419 16548 14942 19610 20038 17721 12963 10382 12489 11701 13385 14496 12679 11876 14665 19255 17681 17135 19543 17239 15579 19539 19107 16860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18383000 18880 4061 17731 35823 28697 28697 1 9606 Homo sapiens -0.06034756532926622 MPCQLHQVIVAR Oxidation (M) 1466.7486 0.74862346 4021 Q59EF6;B4E1R7;B2RCM3;P17655;B4DN77;P17655-2;B3KUH9 CAPN2 Calpain-2 catalytic subunit yes no 0 1 0 2.5 0.5 1 1 39.033 39.093 3 0.015619 9292 20230619_1882_Aki_TMTPro18x_K_F3 59.496 39.709 28409 19460 34115 32854 42233 39962 38402 38566 39854 30762 46936 37006 35706 31620 49846 30509 37325 32149 26286 17933 34288 32157 43048 39833 39000 39286 40742 31709 47292 37145 37456 32727 49638 30839 35797 30537 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68640000 18881 4021 17732 35824;35825 28698 28698 2656 1 9606 Homo sapiens 0.03391909550714445 MPCTEDYLSLILNR Unmodified 1723.8273 0.82732729 2776 CON__P02769 yes yes 0 0 0 2 0 1 64.387 64.395 3 4.722E-17 20572 20230619_1881_Aki_TMTPro18x_K_F2 214.78 175.6 + 10996 12364 13763 11251 21122 25789 16133 15786 20596 13337 13957 14984 15964 15561 14025 13609 14295 20770 10212 11302 13850 11649 21243 24744 16687 16741 20453 13689 14726 15153 16153 15933 14310 14109 13719 19628 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52914000 18882 2776 17733 35826 28699 28699 1 9606 Homo sapiens -0.005633277254901259 MPCTEDYLSLILNR Oxidation (M) 1739.8222 0.82224192 2776 CON__P02769 yes yes 0 1 0 8 0 1 63.353 63.376 3 6.9943E-17 19230 20230619_1888_Aki_TMTPro18x_K_F8 211.22 192.49 + 60927 67895 83443 63396 188140 208930 120690 128600 173420 93091 90582 120810 91973 90549 90929 98261 101320 141630 56637 62078 84359 66297 185380 198370 127120 135800 170260 97052 97103 120260 93916 94805 93110 101010 97125 133920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 724180000 18883 2776 17733 35827 28700 28700 1656 1 9606 Homo sapiens -0.018076315881216942 MPDVDISVPK Unmodified 1099.5583 0.5583463 3815 Q09666;Q6ZQN2 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 6 0 1 57.318 57.39 3 0.074306 17043 20230619_1886_Aki_TMTPro18x_K_F6 40.715 27.759 37432 28356 31575 28457 27026 34440 37206 36351 41911 33461 43187 40780 40074 35968 42068 44168 43763 42538 34551 25975 32484 28841 28758 34415 37071 36925 42425 34207 44106 40940 41107 37676 42848 44159 41847 40424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18562000 18884 3815 17734 35828 28701 28701 1 9606 Homo sapiens 0.012549461601565781 MPEEEDEAPVLDVR Oxidation (M) 1643.7349 0.7348667 4677 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 1 0 1 0 1 48.326 48.326 2 0.063214 13692 20230619_1880_Aki_TMTPro18x_K_F1 54.7 38.502 14146 8888.7 14773 13946 13855 17424 15641 14524 16694 18694 21264 20218 20006 18233 21170 20500 21352 25595 13066 8186.6 14939 13708 14526 17277 15705 15152 17133 18716 21545 20393 20518 18997 21515 20851 20457 24240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24687000 18885 4677 17735 35829 28702 28702 2851 1 9606 Homo sapiens -0.06125134258036269 MPEEEDEAPVLDVR Unmodified 1627.74 0.73995207 4677 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 0 0 1 0 1 53.456 53.456 3 8.809E-07 15753 20230619_1880_Aki_TMTPro18x_K_F1 95.659 84.219 32503 26517 33102 36969 31022 31980 41210 38719 40537 40986 35621 36055 38134 33991 42067 41453 36808 43960 30058 24360 33572 36408 32626 32871 40932 39162 41156 41141 36913 36754 39034 35531 42417 41679 35318 41701 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50203000 18886 4677 17735 35830 28703 28703 1 9606 Homo sapiens -0.04880830395427438 MPEMHFK 2 Oxidation (M) 950.39901 0.39900889 3815 Q09666;Q8N274 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 2 0 5 0 1 34.653 34.741 3 0.075751 7480 20230619_1885_Aki_TMTPro18x_K_F5 40.268 24.829 30711 26275 31477 33988 40289 44354 44102 41143 58646 45149 52243 63630 51695 44924 49065 49477 60894 57601 28411 24114 32068 33820 41270 43985 44667 42368 58613 45998 53953 63072 52675 47188 50590 50106 58126 54636 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26793000 18887 3815 17736 35831 28704 28704 2500;2501 1 9606 Homo sapiens -0.07817465668813384 MPEMHFK Oxidation (M) 934.40409 0.40409427 3815 Q09666;Q8N274 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 1 0 6.67 0.471 1 2 40.432 40.508 3 0.045547 9223 20230619_1887_Aki_TMTPro18x_K_F7 56.011 40.86 205010 139480 156670 154020 178040 203160 203230 214130 311850 259890 274110 320460 337310 275110 252370 375720 378590 368980 189000 127930 163500 155100 184300 201970 206740 219110 309930 262170 285960 321070 338310 290590 265750 375170 360950 350570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112580000 18888 3815 17736 35832;35833;35834 28705;28706 28705 2500;2501 2 9606 Homo sapiens -0.06573161806181815 MPEMHFK Unmodified 918.40918 0.40917964 3815 Q09666;Q8N274 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 8 0 1 47.686 47.745 3 0.0031225 12555 20230619_1888_Aki_TMTPro18x_K_F8 117.16 86.548 151620 101340 112970 89038 94800 145620 165620 171090 219950 189660 180320 255900 243670 196900 225600 262770 256780 274050 139740 92788 117660 91866 102310 143480 164480 173400 219350 192700 190190 254600 245820 208540 231650 263500 245500 260110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230190000 18889 3815 17736 35835 28707 28707 1 9606 Homo sapiens -0.053288579435729844 MPEMNIK Unmodified 861.40885 0.40884529 3815 Q09666;Q8N274;Q6ZQN2;B4DTV0;Q13727 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 7.5 0.5 1 1 51.128 51.205 2 0.037427 14137 20230619_1887_Aki_TMTPro18x_K_F7 91.9 57.822 157940 104910 113890 98783 114010 168650 160400 172460 230900 189790 193200 237780 239760 208500 202310 266810 306560 272120 145530 96105 119350 101320 120230 165240 161150 176230 229610 192430 202310 238200 241640 219070 212470 267280 292070 258530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205720000 18890 3815 17737 35836;35837 28708 28708 1 9606 Homo sapiens -0.02740277663440338 MPFDANK Unmodified 821.37417 0.37417435 814 A0A087WUB9;Q8WYA6;Q8WYA6-3;Q8WYA6-2;Q8WYA6-4 CTNNBL1 Beta-catenin-like protein 1 yes no 0 0 0 7 0 1 48.828 48.915 2 0.005657 13095 20230619_1887_Aki_TMTPro18x_K_F7 116.54 30.456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18891 814 17738 35838 28709 28709 1 9606 Homo sapiens -0.043657774798930404 MPFPVNHGASSEDTLLK Oxidation (M) 1857.8931 0.89309867 3423 V9HW74;P09936;D6RE83;D6R956;A6NLJ7 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 1 0 6.5 1.12 1 1 1 1 48.968 49.045 3 3.8004E-14 13457 20230619_1886_Aki_TMTPro18x_K_F6 165.44 154.16 579140 513610 578630 709620 711420 682000 598530 632990 564180 631150 680340 681220 622040 562510 632000 707850 665400 773550 535800 471660 590400 699800 724430 690800 609400 650190 581850 639210 690170 685430 637370 591790 644810 712410 637080 733630 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1545099999.9999998 18892 3423 17739 35839;35840;35841;35842 28710;28711;28712 28710 2042 3 9606 Homo sapiens -0.0015321527894229803 MPFPVNHGASSEDTLLK Unmodified 1841.8982 0.89818405 3423 V9HW74;P09936;D6RE83;D6R956;A6NLJ7 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 0 0 7.25 0.829 1 1 2 54.256 54.327 3 2.1393E-24 15448 20230619_1887_Aki_TMTPro18x_K_F7 216.19 194.1 1451300 1322500 1428900 1752400 1372300 1688400 1405400 1487400 1435400 1635700 1597200 1844200 1664900 1501700 1567600 1757400 1689000 2095800 1342700 1213800 1454600 1732800 1432000 1707000 1417100 1537900 1468500 1651000 1635900 1850100 1693000 1573900 1603700 1780200 1617700 1985500 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 7794799999.999999 18893 3423 17739 35843;35844;35845;35846 28713;28714;28715;28716;28717 28716 5 9606 Homo sapiens 0.010910885836892703 MPHGYDTQVGER Oxidation (M) 1404.6092 0.60921267 831 A0A2R8Y473;A0A590UJS8;B4DGL8;A0A087WW65;B3KM98;A0A0S2Z2Z3;A0A5F9ZA98;O75027-3;O75027;O75027-2;A0A0S2Z367 ABCB7 ATP-binding cassette sub-family B member 7, mitochondrial yes no 0 1 0 2.5 0.5 1 1 31.267 31.341 3 0.00012162 6117 20230619_1882_Aki_TMTPro18x_K_F3 103.44 81.882 11581 6896.4 10307 11687 12026 13309 15668 12232 15427 15282 15874 13945 17829 13203 15962 14409 15615 14533 10681 6359.9 10614 11421 12450 13304 15567 12660 15749 15244 16340 14195 18029 13719 16235 14474 14936 13806 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23449000 18894 831 17740 35847;35848 28718 28718 493 1 9606 Homo sapiens -0.07690756532952037 MPIPELDLSELEGLGLSDTATYK Unmodified 2491.2404 0.24037279 3830 Q6FGF7;Q13015 AF1Q;MLLT11 Protein AF1q yes no 0 0 0 6 0.816 1 1 1 66.311 66.348 3 3.7741E-05 20705 20230619_1885_Aki_TMTPro18x_K_F5 80.98 71.222 10926 6527.3 7001.8 10420 9001.7 7197.9 9866.8 9193 6999.4 8918.9 8899.2 6560.4 10255 9178.4 9142.9 10043 10639 7426.5 10056 6014.6 7486.6 10154 9194.8 7303.1 9809.2 9253 7187.2 8952.7 9087.9 6869.4 10374 9423.7 9402.7 9931.7 10143 7093.2 2 2 2 2 2 1 2 2 1 2 2 2 2 2 2 2 2 2 35834000 18895 3830 17741 35849;35850;35851 28719;28720 28719 2 9606 Homo sapiens 0.054402219016537856 MPLIGLGTWK Unmodified 1114.6209 0.62088698 3450 V9HWI0;P14550;Q5T621;V9GYG2;V9GYP9 HEL-S-165mP;AKR1A1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 5.5 0.5 2 2 63.59 63.637 2;3 0.00020817 19729 20230619_1886_Aki_TMTPro18x_K_F6 163.15 0 390180 347410 365010 381530 328100 425820 389560 396820 422650 285690 268830 233940 246270 232660 392370 287790 286770 251720 360790 318290 372500 383210 345940 426480 390270 404420 422140 293370 282190 240070 259160 242850 390000 286670 275160 239600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 588740000 18896 3450 17742 35852;35853;35854;35855 28721;28722 28722 2 9606 Homo sapiens 0.06816137019018242 MPPSHQLDHSK Oxidation (M) 1291.5979 0.5979197 3810 Q07960;H0YE29;B4DPZ4;E9PNR6 ARHGAP1 Rho GTPase-activating protein 1 yes no 0 1 0 5.5 0.5 1 1 29.991 30.045 4 3.2512E-06 5783 20230619_1886_Aki_TMTPro18x_K_F6 155.86 137.72 20636 13157 19236 21313 26408 34990 27358 34322 36650 22309 29276 33053 30836 30235 23838 33459 41584 40773 19045 12122 19790 21019 26953 34289 27817 34754 36461 23541 30468 32990 31143 31436 25394 33949 39611 38652 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18656000 18897 3810 17743 35856;35857 28723 28723 2484 1 9606 Homo sapiens -0.03621533836417257 MPPYDEQTQAFIDAAQEAR Oxidation (M) 2195.9793 0.9793475 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;A0A0S2Z4D8;A0A0S2Z4W7;A0A0C4DGP4 PRKCSH Glucosidase 2 subunit beta yes no 0 1 0 4.5 0.5 1 1 58.531 58.56 3 0.035034 17762 20230619_1883_Aki_TMTPro18x_K_F4 42.908 39.855 27278 22894 28085 31449 27074 33243 30424 31089 34862 31972 38041 34328 35177 31009 38577 40377 38884 38619 25234 21026 28472 31069 28319 33414 30630 31938 35371 32344 38740 34665 36161 32582 39196 40321 37199 36700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24125000 18898 444 17744 35858;35859 28724 28724 277 1 9606 Homo sapiens -0.07080300234838433 MPPYTVVYFPVR Oxidation (M) 1483.7534 0.75335771 3419 V9HWE9;P09211;A8MX94;Q5D6A5;A0A2R8Y5E5 HEL-S-22;GSTP1 Glutathione S-transferase P yes no 0 1 0 4.5 0.5 1 1 59.911 59.939 2 0.07288 18353 20230619_1883_Aki_TMTPro18x_K_F4 54.539 48.006 22921 20218 19556 22440 36099 42586 28460 27625 44751 19534 16100 18165 16871 17338 20906 19310 20948 20315 21179 18526 20417 22729 36046 41182 29601 29026 43465 20206 17922 18473 17425 18007 21180 19436 20038 19287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27488000 18899 3419 17745 35860;35861 28725 28725 2036 1 9606 Homo sapiens 0.030831169651264645 MPQMIVNWQQQQR Unmodified 1685.813 0.81301463 4262 Q8TAE8;Q7LAX7 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes no 0 0 0 5 0 1 58.673 58.73 2 0.019489 17375 20230619_1885_Aki_TMTPro18x_K_F5 73.985 59.295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18900 4262 17746 35862 28726 28726 1 9606 Homo sapiens -0.0024593536311385833 MPSESAAQSLAVALPLQTK Oxidation (M) 1957.019 0.019027468 3260 O43660-2;O43660;D6RA26 PLRG1 Pleiotropic regulator 1 yes no 0 1 0 1 0 1 60.579 60.579 3 1.9051E-07 18753 20230619_1880_Aki_TMTPro18x_K_F1 108.49 88.108 13146 12560 14108 17151 14217 16179 19239 18363 17934 20640 19695 19185 19530 13867 22305 20143 18527 20118 12176 11529 14277 16926 14885 16480 19065 18673 18427 20678 20125 19362 20044 14827 22412 20146 17774 19102 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37570000 18901 3260 17747 35863 28727 28727 1925 1 9606 Homo sapiens 0.07879871506474956 MPSGEFAR Oxidation (M) 909.40145 0.40145173 3437 Q6FHF5;P12004 PCNA Proliferating cell nuclear antigen yes no 0 1 0 4 0.816 1 1 1 34.432 34.498 2 0.0091848 7354 20230619_1882_Aki_TMTPro18x_K_F3 96.111 69.247 171910 130890 145820 156180 173270 181500 159040 163340 186660 183360 199920 158290 205580 153350 140060 213330 205220 163250 158690 120080 150750 155980 177460 181240 162080 168620 189160 183510 204350 161900 206420 161570 147570 210400 195430 155740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 474400000 18902 3437 17748 35864;35865;35866 28728;28729 28728 2065 2 9606 Homo sapiens -0.05687293939490701 MPSGEFAR Unmodified 893.40654 0.40653711 3437 Q6FHF5;P12004 PCNA Proliferating cell nuclear antigen yes no 0 0 0 5.5 1.12 1 1 1 1 41.958 42.031 2 0.018482 10330 20230619_1886_Aki_TMTPro18x_K_F6 90.37 54.184 627200 469210 569220 546510 567340 629690 582190 553610 646330 646270 648810 534570 699180 512700 535190 687870 662380 503040 579200 430400 582830 546830 590080 628810 588290 573310 655170 644910 666810 547550 703710 539040 554910 677710 631430 480330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1436400000 18903 3437 17748 35867;35868;35869;35870 28730;28731 28731 2 9606 Homo sapiens -0.0444299007688187 MPSHQGAEQQQQQHHVFISQVVTEK Oxidation (M) 2916.3937 0.39368759 762 O94979-9;D6REX3;O94979-6;O94979-3;O94979-4;O94979-10;O94979-2;O94979;O94979-8;A0A1S5UZ19;A1LU61;A0A024RDH6;D6RHZ5;O94979-7;H7BXG7;O94979-5;H0YAB3;H0Y8V7 SEC31A;SEC31L1 Protein transport protein Sec31A yes no 0 1 0 6.5 0.5 1 1 38.873 38.947 5 3.6173E-20 8803 20230619_1887_Aki_TMTPro18x_K_F7 160.45 146.61 22255 19126 26465 27373 33028 31393 26552 25978 29686 30139 29537 32176 25944 25079 27842 29842 31606 32394 20617 17572 26628 27006 33564 31324 27253 27031 30079 30298 30178 32314 26708 26345 28497 30050 30210 30738 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65094000 18904 762 17749 35871;35872 28732;28733 28733 464 2 9606 Homo sapiens 0.012146497906542209 MPSHQGAEQQQQQHHVFISQVVTEK Unmodified 2900.3988 0.39877297 762 O94979-9;D6REX3;O94979-6;O94979-3;O94979-4;O94979-10;O94979-2;O94979;O94979-8;A0A1S5UZ19;A1LU61;A0A024RDH6;D6RHZ5;O94979-7;H7BXG7;O94979-5;H0YAB3;H0Y8V7 SEC31A;SEC31L1 Protein transport protein Sec31A yes no 0 0 0 7.5 0.5 1 1 41.481 41.516 5 1.7971999999999998E-26 10093 20230619_1888_Aki_TMTPro18x_K_F8 179.17 166.49 21569 19964 21378 22551 20185 28018 25049 22913 25521 25880 24194 29063 28959 21796 22974 30632 27766 31165 19959 18293 21732 22634 21232 27789 24986 23847 25933 26092 25125 29102 29106 23202 23775 30644 26544 29583 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177200000 18905 762 17749 35873;35874 28734 28734 1 9606 Homo sapiens 0.024589536532403145 MPSLPSYK Unmodified 921.46299 0.46298935 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8;B4DVU1;E9PFF2 HEL107;TKT Transketolase yes no 0 0 0 2.5 0.5 1 1 53.265 53.308 3 0.0017735 15607 20230619_1882_Aki_TMTPro18x_K_F3 98.458 53.146 82748 66490 68578 76487 62539 82418 73829 73126 167900 116030 110200 115900 125090 108820 96300 140860 127970 139430 76398 60966 70811 76505 66087 82670 76619 76495 163270 115140 116390 117430 125910 114170 100430 140810 122220 132400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75444000 18906 3523 17750 35875;35876 28735 28735 1 9606 Homo sapiens -0.0008836224021706585 MPTPVIK Unmodified 784.4517 0.45169638 3406 P07954-2;A0A804HI24;A0A0S2Z4C3;P07954;A0A804HKE6;A0A0S2Z3S9;A0A0S2Z3W2;A0A0S2Z3X6;A0A0S2Z4H0 FH Fumarate hydratase, mitochondrial yes no 0 0 0 2.33 0.471 2 1 50.027 50.089 2;3 0.070299 14458 20230619_1881_Aki_TMTPro18x_K_F2 81.297 38.297 312900 245410 242700 298810 337650 365560 359960 363320 391960 361280 386330 414390 399150 342020 337750 427730 411770 416700 288720 225170 254190 298210 343920 364540 362520 371200 397240 366840 397350 415850 404140 359650 349120 427580 393290 395890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 273190000 18907 3406 17751 35877;35878;35879 28736;28737 28737 2 9606 Homo sapiens 0.05084860456292972 MPYQEIK Oxidation (M) 923.44225 0.44225391 1901 A0RZB8;Q6URC4;O60610-2;O60610-3;O60610;A0A1E1ERW3;A0A2R8Y5N1;Q7KZJ7;Q96IL1;B4DVR3 DIAPH1 Protein diaphanous homolog 1 yes no 0 1 0 5.5 0.5 1 1 42.473 42.561 2 0.056667 10601 20230619_1885_Aki_TMTPro18x_K_F5 75.213 23.195 43647 29516 36202 41933 42034 45424 42060 42841 49587 51748 58587 50307 54268 45653 46260 54060 65950 64130 40259 27142 37513 41355 43222 45602 42651 44180 50453 51777 59427 51010 55155 47717 48309 54726 62898 60811 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40135000 18908 1901 17752 35880;35881 28738 28738 1217 1 9606 Homo sapiens -0.02252952619869575 MQAQMQMQMQGGDGDGGALGHHV 3 Oxidation (M) 2430.9773 0.97733214 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;H7C2Y0;H7C1T1 SEPT2 Septin-2 yes no 0 3 0 3 0 2 36.21 36.264 3 0.018987 8091 20230619_1882_Aki_TMTPro18x_K_F3 51.348 50.586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18909 3910 17753 35882;35883 28739;28740 28740 2584;2585;2586;2587 2 9606 Homo sapiens -0.180917435783158 MQAQMQMQMQGGDGDGGALGHHV 2 Oxidation (M) 2414.9824 0.98241751 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;H7C2Y0;H7C1T1 SEPT2 Septin-2 yes no 0 2 0 3 0 1 39.534 39.588 3 0.022476 9415 20230619_1882_Aki_TMTPro18x_K_F3 56.327 56.161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18910 3910 17753 35884 28741 28741 2584;2585;2586;2587 1 9606 Homo sapiens -0.16847439715729706 MQAQMQMQMQGGDGDGGALGHHV Unmodified 2382.9926 0.99258827 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;H7C2Y0;H7C1T1 SEPT2 Septin-2 yes no 0 0 0 5 0 1 47.31 47.387 3 1.485E-05 12652 20230619_1885_Aki_TMTPro18x_K_F5 90.718 87.752 7185.4 8468.5 8091.9 8480.2 7995 9626.3 7866.7 7961.9 9474.8 9749.7 9870.6 9559.1 10307 9484.8 9067.8 12865 10697 8919.7 6669.4 7746 8145.7 8581.8 8314.9 9612.6 7993.1 8297.1 9581.6 9754.7 10125 9718.1 10453 9955 9353.2 12643 10207 8520.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20835000 18911 3910 17753 35885 28742 28742 1 9606 Homo sapiens -0.1435883199046657 MQAQWER Oxidation (M) 963.42325 0.4232498 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959;K7EII0 SAFB Scaffold attachment factor B1 yes no 0 1 0 3.5 0.5 1 1 33.987 34.047 2 0.091934 7119 20230619_1883_Aki_TMTPro18x_K_F4 67.464 39.582 67486 52452 62733 67692 82670 87525 77591 77517 100640 70298 79685 79953 81088 68004 79535 73113 97768 78291 62346 48155 64449 67353 84175 86769 79213 79683 100300 71795 82811 80328 82666 70819 81862 73711 93232 74378 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61994000 18912 2020 17754 35886;35887 28743 28743 1267 1 9606 Homo sapiens -0.05992489190930428 MQAQWEREER Oxidation (M) 1377.6095 0.60954702 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959;K7EII0 SAFB Scaffold attachment factor B1 yes no 0 1 1 2.5 0.5 1 1 31.449 31.523 3 0.00030981 6289 20230619_1881_Aki_TMTPro18x_K_F2 119.53 87.686 35669 34298 37674 31606 47001 42446 39657 45557 40996 38438 42541 41590 37274 33619 43190 37226 47918 43088 33034 31370 38193 32332 47801 42216 40481 46101 41754 39311 43354 41812 38509 35132 44039 37701 45768 40881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94167000 18913 2020 17755 35888;35889 28744 28744 1267 1 9606 Homo sapiens -0.06415336813074646 MQAQWEREER Unmodified 1361.6146 0.6146324 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959;K7EII0 SAFB Scaffold attachment factor B1 yes no 0 0 1 3 0 1 36.838 36.893 3 5.0909E-07 8327 20230619_1882_Aki_TMTPro18x_K_F3 174.87 141.46 60495 56367 62270 56572 64835 63579 63046 71301 69167 65486 68850 60612 75676 53531 64887 67703 75029 61446 56001 51594 63097 57272 67027 63987 63907 72111 70118 66331 70894 61560 76438 56249 66739 67455 71595 58478 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84609000 18914 2020 17755 35890 28745 28745 1 9606 Homo sapiens -0.05171032950465815 MQASIEK Oxidation (M) 821.3953 0.39530372 1089;2882 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;Q9BTI9;Q9NX34;A0A024RAP1;V9HVU7;A0A024R3V9;E5RI98;A0A7I2V5J8 NPM1;CLEC2D;hCG_37498 Nucleophosmin no no 0 1 0 5.5 0.957 1 2 2 1 37.292 37.365 2 0.014548 8281 20230619_1885_Aki_TMTPro18x_K_F5 106.38 22.154 564770 299640 760900 713920 1064500 1167300 767920 1028700 801410 550720 944580 1035900 755400 758420 1017200 358390 1054700 906640 522580 278040 760810 692080 1073100 1141700 793580 1046800 819070 596990 955300 1019400 790100 770260 1028000 399570 1007800 855870 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 819450000 18915 1089;2882 17756 35891;35892;35893;35894;35895;35896 28746;28747;28748;28749;28750 28747 657 5 9606 Homo sapiens -0.022538121710226733 MQASIEK Unmodified 805.40039 0.4003891 1089;2882 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;Q9BTI9;Q9NX34;A0A024RAP1;V9HVU7;A0A024R3V9;E5RI98;A0A7I2V5J8 NPM1;CLEC2D;hCG_37498 Nucleophosmin no no 0 0 0 6 0.816 1 1 1 42.724 42.808 2 0.0063666 10651 20230619_1886_Aki_TMTPro18x_K_F6 142.19 31.382 374090 172850 455350 410600 606700 718270 208870 577540 492180 353600 585410 590400 246910 483850 309880 213720 620140 527700 345590 160520 457510 398670 608500 698970 243900 592520 488400 376740 581200 584640 267910 487360 330540 237140 589700 498230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1438400000 18916 1089;2882 17756 35897;35898;35899 28751 28751 1 9606 Homo sapiens -0.010095083084138423 MQATADSTK Acetyl (Protein N-term) 993.44371 0.44371047 2026 Q6IAX4;A8K3B9;Q16799-3 RTN1 Reticulon;Reticulon-1 yes no 1 0 0 2 0 1 41.017 41.092 2 6.7757E-05 10294 20230619_1881_Aki_TMTPro18x_K_F2 107.66 101.01 66217 48022 86615 79495 82651 103020 86928 98005 93724 83764 117810 138510 106670 113250 130410 70158 142820 139680 61342 44232 86203 77978 86312 102180 87695 100070 95965 87078 119450 137130 110500 115340 132530 75297 136510 131940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119030000 18917 2026 17757 35900 28752 28752 1 9606 Homo sapiens -0.05327363321782741 MQDAENVAVPEAAEER Acetyl (Protein N-term);Oxidation (M) 1815.7945 0.79450684 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q86UM1;C9JZG1 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 1 1 0 1 0 1 45.886 45.886 2 7.567E-34 12651 20230619_1880_Aki_TMTPro18x_K_F1 166.24 144.87 3261.9 1299.6 1665.1 3118.3 2878.8 3429.6 3214.4 2133.3 3879.5 2747.2 5216 3034.2 4742.2 4248.5 3638.2 2398.8 3755.1 3901.9 2994.3 1208.4 1852.2 2996.3 2910.2 3410.8 3237.8 2290.2 3958.4 2759.1 5250.9 3115.3 4801.7 4246.5 3718.4 2529.6 3592.8 3689.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38739000 18918 487 17758 35901 28753 28753 300 1 9606 Homo sapiens -0.08075863314616072 MQDAENVAVPEAAEER Acetyl (Protein N-term) 1799.7996 0.79959222 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q86UM1;C9JZG1 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 1 0 0 1 0 1 52.939 52.939 2 4.7345E-14 15541 20230619_1880_Aki_TMTPro18x_K_F1 92.856 87.076 12355 7587 11875 12103 7854.5 13293 11476 10021 14213 11502 14195 12629 12874 10314 11370 13967 15107 15146 11403 6990 12049 11859 8615.8 13259 11448 10512 14305 11589 14494 12702 13110 10914 11809 14033 14418 14373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156640000 18919 487 17758 35902 28754 28754 1 9606 Homo sapiens -0.06831559452007241 MQDIPEETESR Unmodified 1333.582 0.58199487 1584 A0A8Q3SIN5;D3DVA5;V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF0 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 0 0 0 1 0 1 42.75 42.75 2 1.9465E-05 11298 20230619_1880_Aki_TMTPro18x_K_F1 132.17 109.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18920 1584 17759 35903 28755 28755 1 9606 Homo sapiens -0.07145284863963752 MQEENITR Unmodified 1019.4706 0.47059393 2873 E5KT65;P19388;B4DJ89;A0A087WWX0;A0A087WVZ9;A0A0A0MQR7;A0A087WVN5 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes no 0 0 0 2 0 1 35.955 36.011 2 0.0080089 8079 20230619_1881_Aki_TMTPro18x_K_F2 105.94 66.787 82973 51738 93771 90206 101150 116400 80768 96259 108180 96660 118230 127890 124940 102530 97536 76782 144900 131040 76692 47721 94430 88218 104000 115180 83566 99705 109030 98641 121150 127440 126000 105320 102140 80689 138090 123940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64168000 18921 2873 17760 35904 28756 28756 1 9606 Homo sapiens -0.03836254710608955 MQEGEGHSQLCLDR Unmodified 1658.7141 0.71408845 4276 Q8WUA4;Q53SY8;H0Y4Q6;H7C1A9;H7C318 GTF3C2 General transcription factor 3C polypeptide 2 yes no 0 0 0 3 0 1 38.263 38.316 3 0.082157 8914 20230619_1882_Aki_TMTPro18x_K_F3 28.627 21.588 22559 16158 28077 25825 28805 34379 29877 29082 25945 27019 33548 31074 31181 28167 31037 25551 39753 30234 20885 14876 28064 25387 29880 33970 29957 30021 26956 27539 33950 31267 31908 29010 32007 26004 37885 28701 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21325000 18922 4276 17761 35905 28757 28757 1 9606 Homo sapiens -0.0889200311867171 MQEHSDQVPVGNIPR Oxidation (M) 1721.8155 0.81551705 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;P33993-2;C9J8M6 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 1 0 3 0 1 37.165 37.218 3 8.5621E-11 8443 20230619_1882_Aki_TMTPro18x_K_F3 156.17 129.63 38300 32948 37693 37899 43689 41124 44941 43248 43745 56702 57806 48370 57120 44320 48730 58045 52161 48718 35422 30203 38426 37927 44869 41420 45216 44387 45253 56302 58547 49378 57881 46591 49940 57564 49850 46384 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183310000 18923 1091 17762 35906 28758 28758 661 1 9606 Homo sapiens -0.01651808424480805 MQEHSDQVPVGNIPR Unmodified 1705.8206 0.82060243 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;P33993-2;C9J8M6 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 4.5 0.5 1 1 40.669 40.734 3 3.2285E-19 9842 20230619_1883_Aki_TMTPro18x_K_F4 212.24 198.43 126000 92962 117220 112930 100750 116930 119570 108570 131550 148510 148650 139450 159550 131170 121670 165350 138020 143460 116370 85312 119540 112490 106530 117750 119880 112600 134110 147670 152080 141740 160650 137380 125540 164270 131940 136470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 761980000 18924 1091 17762 35907;35908 28759 28759 1 9606 Homo sapiens -0.004075045618492368 MQELALSEGALPR Unmodified 1413.7286 0.72859953 3295 O75165;A0A3B3IRM0 DNAJC13 DnaJ homolog subfamily C member 13 yes no 0 0 0 5 0 1 56.347 56.409 3 0.0013202 16420 20230619_1885_Aki_TMTPro18x_K_F5 70.373 51.593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18925 3295 17763 35909 28760 28760 1 9606 Homo sapiens 0.038284370917835986 MQEQLER Oxidation (M) 948.43348 0.43348014 1944 A4D218;Q9Y6D9;Q9Y6D9-4;C9JJ38;C9JIR0 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes no 0 1 0 1 0 1 29.953 29.953 2 0.088872 5980 20230619_1880_Aki_TMTPro18x_K_F1 67.981 24.857 6710.9 3829.6 6177.5 7548 10793 8653.2 8360.6 8676.4 10999 7412 10136 13948 8987.2 11019 10771 5697.8 10915 10791 6189.6 3540.3 6393.3 7323.4 10760 8668.5 8649.5 8831.2 11008 7762.9 10419 13740 9316.3 11167 10900 6116.8 10441 10196 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7862900 18926 1944 17764 35910 28761 28761 1239 1 9606 Homo sapiens -0.04279926256356248 MQEQQADLQR Oxidation (M) 1261.5721 0.57209888 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;Q59F36 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 1 0 1 0 1 30.717 30.717 2 0.00093141 6276 20230619_1880_Aki_TMTPro18x_K_F1 110.53 89.562 12240 7072.7 13689 13805 20262 19872 14644 18298 20310 15852 19132 21797 18918 17673 19357 12092 23290 21655 11308 6537.1 13880 13456 20363 19590 15275 18722 20314 16339 19695 21695 19350 18075 19850 12803 22235 20473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11429000 18927 1717 17765 35911 28762 28762 1120 1 9606 Homo sapiens -0.04822428078705343 MQEVVANLQYDDGSGMK Oxidation (M) 1899.8343 0.83426316 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;A0A7P0TB30;B4DSA8;B4DZP5;Q16531-2 DDB1 DNA damage-binding protein 1 yes no 0 1 0 5 0 1 57.88 57.938 3 0.042127 17029 20230619_1885_Aki_TMTPro18x_K_F5 42.068 32.538 41881 30311 36406 43093 35692 41951 38554 38846 47902 50982 51979 51063 50920 48349 45301 55195 53226 60722 38657 27866 37467 42433 37256 42423 39009 40234 48452 50881 53079 51744 51775 50315 46660 55636 50901 57588 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39987000 18928 1710 17766 35912 28763 28763 1110 1 9606 Homo sapiens -0.07966059635600686 MQEVVANLQYDDGSGMK Unmodified 1883.8393 0.83934854 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;A0A7P0TB30;B4DSA8;B4DZP5;Q16531-2 DDB1 DNA damage-binding protein 1 yes no 0 0 0 5.5 0.5 1 1 60.551 60.605 3 1.0957E-09 18154 20230619_1885_Aki_TMTPro18x_K_F5 139.88 129.23 69109 49443 61776 69946 48638 65079 58602 60912 74152 84549 80207 90072 100470 80850 72274 109030 102510 108660 63797 45454 63221 68862 51964 66043 59030 63165 74979 84340 82928 90874 100560 85214 75862 108970 97834 103190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 121110000 18929 1710 17766 35913;35914 28764;28765 28764 2 9606 Homo sapiens -0.06721755772991855 MQEVVANLQYDDGSGMKR Unmodified 2039.9405 0.94045957 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;A0A7P0TB30;B4DSA8;B4DZP5;Q16531-2 DDB1 DNA damage-binding protein 1 yes no 0 0 1 7 0 1 54.765 54.829 3 3.2271E-05 15668 20230619_1887_Aki_TMTPro18x_K_F7 87.676 76.405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18930 1710 17767 35915 28766 28766 1 9606 Homo sapiens -0.03791304070296064 MQGDPDDTSHR Oxidation (M) 1273.4993 0.49932787 3070 H3BPG6;Q86UK7-2;Q86UK7-3;Q86UK7 ZNF598 Zinc finger protein 598 yes no 0 1 0 1 0 1 25.031 25.031 3 0.016775 4229 20230619_1880_Aki_TMTPro18x_K_F1 59.57 35.188 0 0 897.69 0 1289.9 1512.8 0 0 1644.6 0 0 1108.5 743.06 0 870.81 0 997.15 839.24 0 0 836.96 0 1276.7 1379.8 0 0 1513.5 0 0 1032.3 737.72 0 884.98 0 951.75 788.8 0 0 1 0 1 1 0 0 1 0 0 1 1 0 1 0 1 1 880460 18931 3070 17768 35916 28767 28767 1793 1 9606 Homo sapiens -0.12648181872123132 MQGDPDDTSHR Unmodified 1257.5044 0.50441325 3070 H3BPG6;Q86UK7-2;Q86UK7-3;Q86UK7 ZNF598 Zinc finger protein 598 yes no 0 0 0 1 0 1 28.274 28.274 3 0.00017687 5325 20230619_1880_Aki_TMTPro18x_K_F1 113.22 105.63 5071.7 3861.4 5653.6 4987.3 5544.3 7865.5 6845.7 8305.2 6455.2 5756.1 6844.5 7132.5 7696 7794.2 7596.4 4442 7775.8 8526.9 4692.1 3545.4 5692.4 4984.1 5811.9 7737.6 6819.7 8377.6 6610.7 5995.9 7046 7196.8 7830.2 7841.6 7718 4757.9 7443.3 8052.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3153300 18932 3070 17768 35917 28768 28768 1 9606 Homo sapiens -0.11403878009491564 MQGQEAVLAMSSR Unmodified 1406.6646 0.66461906 3931 Q15393;A8K6V3;B3KQH1 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 7.5 0.5 1 1 48.514 48.601 2;3 9.8877E-08 12960 20230619_1888_Aki_TMTPro18x_K_F8 158.01 123.2 43878 31409 40650 43062 45149 59971 41504 46859 79001 46595 42561 34550 50049 34580 40427 43291 53414 46737 40516 28865 41652 42730 46613 59018 43200 48737 76824 46834 45631 35651 50363 36191 42005 43545 50935 44379 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93348000 18933 3931 17769 35918;35919 28769;28770 28770 2 9606 Homo sapiens -0.02244666336832779 MQGQSPPAPTR Oxidation (M) 1184.5608 0.56080592 3873 Q14008-2;Q14008;Q14008-3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 1 0 6 0.816 1 1 1 29.149 29.22 2 0.088596 5477 20230619_1886_Aki_TMTPro18x_K_F6 51.927 41.403 4331.1 3041.3 7292.2 6707.9 6586.7 7993.7 7072.7 7751 6636.9 4857.5 8928.2 8783 6694.4 8505.2 9740.1 5105.5 8916.1 10516 4013.1 2808.5 7148.5 6484.7 6905.4 7883.7 7042.4 7858.3 6827.3 5186.3 8960.4 8729.9 6948.1 8595.8 9779.8 5503.8 8549.9 9925 2 2 3 3 3 2 2 3 2 3 3 3 2 3 3 3 3 3 11200000 18934 3873 17770 35920;35921;35922 28771 28771 2541 1 9606 Homo sapiens -0.02409205382195978 MQGQSPPAPTR Unmodified 1168.5659 0.56589129 3873 Q14008-2;Q14008;Q14008-3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 7 0.816 1 1 1 33.901 33.942 2 0.0011727 6874 20230619_1887_Aki_TMTPro18x_K_F7 99.973 67.133 27071 15130 27732 27868 31856 41336 27648 31244 42042 37836 39573 45313 41861 32991 39013 31964 49253 47137 24987 13975 28183 27245 32727 40506 28578 32775 41917 38126 40852 45192 42509 34417 40243 33010 47011 44618 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17862000 18935 3873 17770 35923;35924;35925 28772;28773 28773 2 9606 Homo sapiens -0.011649015195644097 MQHLIAR Unmodified 867.47489 0.47489144 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 2.5 0.5 1 1 35.835 35.892 2 0.027217 7911 20230619_1882_Aki_TMTPro18x_K_F3 96.51 64.445 218620 133200 177280 197050 239800 252630 242400 233020 276460 255940 276080 266440 267650 227370 244560 290470 306250 247930 201510 122610 184600 194380 244240 250740 245230 239990 279670 257800 282830 268780 272400 239080 252730 288400 292020 236150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 189960000 18936 370;3451 17771 35926;35927 28774;28775 28775 2 9606 Homo sapiens 0.035852992936384 MQHNLEQQIQAR Oxidation (M) 1510.7311 0.73105914 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 1 0 5.78 0.916 1 2 4 2 34.288 34.348 3 7.818E-10 7052 20230619_1885_Aki_TMTPro18x_K_F5 173.76 150.53 89521 50259 78820 78257 92319 100200 97140 99392 110330 94098 105790 96397 104260 86927 89471 103700 111750 87493 82533 46312 81161 76998 94976 99597 98071 101420 111420 95479 108610 97500 105770 90846 92538 103010 106540 83362 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 333200000 18937 1022;3868 17772 35928;35929;35930;35931;35932;35933;35934;35935;35936 28776;28777;28778;28779;28780 28776 591 5 9606 Homo sapiens -0.0038771445056227094 MQHNLEQQIQAR Unmodified 1494.7361 0.73614452 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 6.5 0.5 1 1 38.72 38.793 3 6.191000000000001E-41 9015 20230619_1886_Aki_TMTPro18x_K_F6 250.26 238.68 67537 41484 69955 67718 83927 79106 85689 84311 93260 78859 91957 89727 86561 81277 96678 101340 91088 81824 62370 38232 71049 66368 85996 79241 86526 85620 94474 80339 94192 90375 89044 85098 97848 100430 87142 77957 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 347030000 18938 1022;3868 17772 35937;35938 28781;28782 28781 2 9606 Homo sapiens 0.0085658941204656 MQLKPMEINPEMLNK 2 Oxidation (M) 1846.8991 0.89911203 3423 V9HW74;P09936;D6RE83;B2RD14;D6R956;D6R974;D6RF53 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 2 1 5.67 3.3 1 2 51.861 51.912 3;4 0.0010242 14231 20230619_1888_Aki_TMTPro18x_K_F8 74.853 56.021 219450 210860 237220 276500 293770 230320 272580 258980 234070 222090 271680 225840 201210 156950 266220 167180 180390 145260 203280 193480 240460 273210 299140 237320 274940 261770 242060 226420 273740 226830 210420 164730 264280 166990 173190 138330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 568030000 18939 3423 17773 35939;35940;35941 28783;28784;28785 28784 2043;2044;2045 3 9606 Homo sapiens 0.009538436367392933 MQLKPMEINPEMLNK Oxidation (M) 1830.9042 0.90419741 3423 V9HW74;P09936;D6RE83;B2RD14;D6R956;D6R974;D6RF53 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 1 1 1 0 2 55.982 55.982 3;4 9.4618E-07 17014 20230619_1880_Aki_TMTPro18x_K_F1 121.31 103.61 149290 128490 153120 172710 167310 175900 164580 160650 129480 169330 180400 134210 132020 100980 180560 108250 103620 81553 138120 117970 155540 170770 172400 177290 165120 165440 136070 169460 180380 136750 138360 105680 178100 107450 99731 77823 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 682070000 18940 3423 17773 35942;35943 28786;28787 28787 2043;2044;2045 2 9606 Homo sapiens 0.02198147499325387 MQLKPMEINPEMLNK Unmodified 1814.9093 0.90928278 3423 V9HW74;P09936;D6RE83;B2RD14;D6R956;D6R974;D6RF53 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 0 1 2 0 2 59.627 59.64 3;4 1.175E-10 18444 20230619_1881_Aki_TMTPro18x_K_F2 163.99 138.67 274860 245280 290830 310840 223010 335850 299080 295420 268680 324240 307430 250690 289330 208830 342590 195490 196290 134600 254420 225030 293320 308810 239570 336540 296390 305380 277210 323760 312610 256300 297880 216230 338520 193850 188800 128720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 664090000 18941 3423 17773 35944;35945 28788;28789 28789 2 9606 Homo sapiens 0.03442451361956955 MQLLEIITTEK Unmodified 1317.7214 0.72138888 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 4.5 3.5 1 1 64.211 64.221 2;3 1.3122E-17 19614 20230619_1888_Aki_TMTPro18x_K_F8 275.57 227.83 136830 121460 130640 139650 146440 166420 177040 172320 193940 170430 188760 188930 184520 170960 208050 217020 192110 228190 126540 111330 133550 139930 151710 166390 177210 175570 196310 172940 193810 190460 189660 179320 210330 217940 184210 216490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 275050000 18942 2908 17774 35946;35947 28790;28791 28791 2 9606 Homo sapiens 0.07523704491336503 MQLSGEGAK Unmodified 919.44332 0.44331654 3104 I3L1P8;Q6IBH0;Q02978 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 6 0 1 42.627 42.721 2 0.0038918 10648 20230619_1886_Aki_TMTPro18x_K_F6 102.06 28.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18943 3104 17775 35948 28792 28792 1 9606 Homo sapiens -0.019627382509725066 MQLVCCR Oxidation (M) 981.41943 0.41942675 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 7.5 0.5 1 1 34.802 34.836 2 0.075327 7425 20230619_1888_Aki_TMTPro18x_K_F8 70.268 24.316 55850 43419 45569 36850 64149 53355 59815 57047 70443 17258 16404 14901 18883 14447 22279 17389 19581 12430 51548 39719 47354 38044 64944 52856 60832 56947 68850 19595 19489 15263 19371 15075 22416 17170 18712 11885 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31186000 18944 3758 17776 35949;35950 28793 28793 2441 1 9606 Homo sapiens -0.07202618280655315 MQMLEDEDDLAYAETEK 2 Oxidation (M) 2061.8395 0.8394677 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;Q6P2H7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 2 0 1 0 1 52.883 52.883 3 0.027821 15563 20230619_1880_Aki_TMTPro18x_K_F1 45.384 40.767 15492 8138.9 9572.3 12701 11884 12379 13072 10939 14176 14955 13003 17383 13806 11815 14258 17454 15419 15303 14248 7502.8 10269 12436 12203 12507 13137 11394 14345 14969 13465 17331 14090 12662 14573 17319 14740 14558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23993000 18945 3881 17777 35951 28794 28794 2550;2551 1 9606 Homo sapiens -0.14897845354244055 MQNDAGEFVDLYVPR Acetyl (Protein N-term);Oxidation (M) 1810.8196 0.81959938 3742 Q8WVC2;Q6FGH5;P63220;Q9BYK1;Q9BYK2;Q13666 RPS21 40S ribosomal protein S21 yes no 1 1 0 2 0.816 1 1 1 63.458 63.471 2 9.0853E-64 20165 20230619_1881_Aki_TMTPro18x_K_F2 210.87 184.19 21413 17825 19300 24222 20245 23388 23244 19820 26802 26817 26643 26030 30397 23439 22686 24868 31284 34551 19786 16370 19828 23910 21050 23628 23364 20700 27106 26711 27495 26363 30529 24371 23690 25500 29872 32702 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 607840000 18946 3742 17778 35952;35953;35954 28795;28796 28796 2417 2 9606 Homo sapiens -0.05337763721399824 MQNDAGEFVDLYVPR Acetyl (Protein N-term) 1794.8247 0.82468476 3742 Q8WVC2;Q6FGH5;P63220;Q9BYK1;Q9BYK2;Q13666 RPS21 40S ribosomal protein S21 yes no 1 0 0 2 0.816 1 1 1 64.874 64.887 2 1.7322E-63 20741 20230619_1881_Aki_TMTPro18x_K_F2 196.48 183.28 9197.5 8570.9 8890.2 10425 13356 16142 14168 10432 16635 15025 19004 23544 16665 16696 19048 16808 18323 21198 8509.7 7858.8 9138.3 10443 13555 15756 14300 11188 16889 15206 19320 23260 17210 17441 19276 17144 17558 20077 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 457740000 18947 3742 17778 35955;35956;35957 28797;28798 28797 2 9606 Homo sapiens -0.04093459858790993 MQNDSILK Oxidation (M) 963.46953 0.46953129 955 A0A0A0MSK5;Q5JTV8;Q5JTV8-3;H0YD16 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 0 1 0 5 0 1 42.392 42.475 2 0.021241 10569 20230619_1885_Aki_TMTPro18x_K_F5 81.972 48.233 40413 33408 34147 41778 59781 50185 55465 45269 69039 44369 56435 54052 52323 41402 52079 54237 61317 63924 37323 30654 35631 41600 59856 50038 56526 46596 68971 45238 58301 54035 53516 43828 53484 54827 58597 60604 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30457000 18948 955 17779 35958 28799 28799 535 1 9606 Homo sapiens -0.013664690794939816 MQNDTAENETTEK Oxidation (M) 1525.6202 0.62023087 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;C9J813;Q6PJM5;Q6P707 CALD1 Caldesmon yes no 0 1 0 1 0 1 34.118 34.118 3 0.0013926 7635 20230619_1880_Aki_TMTPro18x_K_F1 74.649 61.881 8185.9 3911.5 6281.4 8167.5 12576 12472 8209.1 10889 9579.8 5847.4 10414 11346 7999.1 10317 8363.2 5665.5 12358 11470 7535.1 3623.3 6642.3 7942.7 12444 12241 8578 11091 9699.2 6353.1 10547 11230 8285.6 10419 8702.2 6104.1 11779 10836 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11095000 18949 3798 17780 35959 28800 28800 2479 1 9606 Homo sapiens -0.12155443739993643 MQNHFGAVR Oxidation (M) 1074.5029 0.50289711 1804 B4DRV5;A0A8Q3WLP2;Q53FD7;Q53H29;A0A8Q3WKJ4;Q7Z3B4-3;Q7Z3B4;A0A8Z5F6C8;Q7Z3B4-2 NUP54 Nucleoporin p54 yes no 0 1 0 8 0 1 28.952 28.973 3 0.0029675 5282 20230619_1888_Aki_TMTPro18x_K_F8 78.516 56.988 30682 18138 29794 31872 40330 45859 37216 34857 48949 12527 14745 12657 12956 14649 20787 11122 14903 9748.6 28315 16736 30514 31208 41005 45024 38029 35780 47719 13948 16663 12935 13689 14840 20619 11194 14281 9292.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22378000 18950 1804 17781 35960 28801 28801 1163 1 9606 Homo sapiens -0.03137422516942934 MQNHGYENPTYK Unmodified 1480.6405 0.6405128 255 B4DTV1;B4E3I5;A0A024R3N3;A0A140VJE9;Q06481-5;Q06481-4;Q06481-2;Q06481-3;Q06481-6;Q06481;B4DKY3 APLP2 Amyloid-like protein 2 yes no 0 0 0 7 0 1 38.285 38.349 3 7.1855E-06 8602 20230619_1887_Aki_TMTPro18x_K_F7 138.42 125.44 25132 17484 23792 28816 21938 27234 26210 24020 26811 34366 32727 38536 36106 27554 26988 41095 43124 37426 23207 16105 24286 28123 23071 27566 26204 25056 27555 34285 33477 38541 36304 29505 28569 40829 41065 35607 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19361000 18951 255 17782 35961 28802 28802 1 9606 Homo sapiens -0.08058183498860672 MQNVINTVK Acetyl (Protein N-term) 1087.5696 0.56957969 4591 Q9NT62;Q9NT62-2;F8WDI0 ATG3 Ubiquitin-like-conjugating enzyme ATG3 yes no 1 0 0 7 0 1 60.323 60.365 2 2.8739E-08 17936 20230619_1887_Aki_TMTPro18x_K_F7 154.31 131.29 57047 44300 48527 51647 48257 61762 55008 53783 65110 68568 63571 59897 78423 57312 59885 78184 66490 75041 52668 40629 50029 51691 50430 61491 55386 55883 65747 68251 65905 61142 78624 60361 61690 77996 63613 71276 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61721000 18952 4591 17783 35962 28803 28803 1 9606 Homo sapiens 0.029297682543301562 MQPASAK Acetyl (Protein N-term) 773.37417 0.37417435 647 A0A024RB32;Q15185-4;Q15185;Q15185-3;B4DDC6;Q15185-2 PTGES3 Prostaglandin E synthase 3 yes no 1 0 0 3.5 0.5 1 1 39.788 39.838 2 0.039991 9537 20230619_1882_Aki_TMTPro18x_K_F3 72.234 67.639 105270 74069 114100 122780 120270 129360 116890 129150 126800 142060 170890 172070 155990 148970 147160 149930 199240 178720 97322 68232 115310 120010 124300 130250 118470 132280 130400 143740 172610 172520 159410 154430 152670 152270 189990 169520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100200000 18953 647 17784 35963;35964 28804 28804 1 9606 Homo sapiens -0.021577774798856808 MQPPTESQVTYLR Unmodified 1548.7606 0.76062794 2975 F5H3Y4;Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 yes no 0 0 0 7 0 1 49.284 49.368 2 0.014404 13290 20230619_1887_Aki_TMTPro18x_K_F7 69.786 34.978 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18954 2975 17785 35965 28805 28805 1 9606 Homo sapiens 0.008198047749147008 MQQENMKPQEQLTLEPYER 2 Oxidation (M) 2423.1097 0.10970974 3487 Q96BS4;P22087;M0QXL5;M0R299 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 2 1 4 0 1 45.771 45.814 3 0.036523 12099 20230619_1883_Aki_TMTPro18x_K_F4 45.094 25.715 17048 13519 17422 21100 18631 19045 21380 20197 21775 21360 23845 27195 26902 21838 19878 30375 30530 29660 15764 12438 17707 20647 19312 19437 21409 20598 22245 21697 24518 27167 27030 23153 20982 30313 29102 28182 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29197000 18955 3487 17786 35966 28806 28806 2144;2145 1 9606 Homo sapiens -0.04492072298171479 MQQENMKPQEQLTLEPYER Unmodified 2391.1199 0.1198805 3487 Q96BS4;P22087;M0QXL5;M0R299 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 0 1 4.5 0.5 1 1 50.853 50.906 3 4.2968E-06 14182 20230619_1885_Aki_TMTPro18x_K_F5 76.768 66.711 10723 9014.3 11052 11512 8302.1 12674 12236 11207 13217 13921 12526 17509 15825 15757 12726 14920 18216 22717 9919.9 8272.4 11167 11434 8972.4 12685 12140 11629 13390 14034 13062 17529 15922 16268 13311 15435 17407 21477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133300000 18956 3487 17786 35967;35968 28807 28807 1 9606 Homo sapiens -0.020034645729083422 MQQHEQALADCR Oxidation (M) 1501.6402 0.64019522 4688 Q9UNE7;Q9UNE7-2 STUB1 E3 ubiquitin-protein ligase CHIP yes no 0 1 0 3 0 1 28.391 28.502 3 0.021313 5074 20230619_1882_Aki_TMTPro18x_K_F3 54.023 41.043 4316.7 1762.7 2947.7 3447 4757.6 4779 4020.3 3724.5 2773.2 3605.8 5507.8 5025.9 6572.6 3747.2 4875.1 4356.6 6585 5963.4 3968.6 1632.8 3137.8 3355.6 4775.2 4705.3 4059.1 3875.7 3007.7 3691.2 5564.7 4997.7 6580.6 3950.1 5077.8 4459.2 6279.6 5649.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2662900 18957 4688 17787 35969 28808 28808 2857 1 9606 Homo sapiens -0.0905592649035043 MQQHEQALADCR Unmodified 1485.6453 0.6452806 4688 Q9UNE7;Q9UNE7-2 STUB1 E3 ubiquitin-protein ligase CHIP yes no 0 0 0 3.5 0.5 1 1 32.943 33.007 3 6.4519E-14 6763 20230619_1882_Aki_TMTPro18x_K_F3 215.34 197.42 23764 14251 21506 24130 30705 31609 24903 24848 31512 30212 35376 30857 34793 29865 26684 31216 39287 31359 21920 13142 22184 23631 31009 31232 25652 25992 31884 30281 36043 31276 35155 30911 27993 31347 37413 29812 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62809000 18958 4688 17787 35970;35971 28809 28809 1 9606 Homo sapiens -0.07811622627718862 MQQHEQALADCRR Unmodified 1641.7464 0.74639163 4688 Q9UNE7;Q9UNE7-2 STUB1 E3 ubiquitin-protein ligase CHIP yes no 0 0 1 5 0 1 29.672 29.747 4 1.034E-10 5605 20230619_1885_Aki_TMTPro18x_K_F5 173.72 158.75 16174 12241 13000 13145 18961 14686 16625 17466 17098 14052 15685 14438 16149 14310 17329 18275 15272 13369 14924 11220 13552 13232 19117 14818 16912 17554 17332 14398 16178 14654 16525 14963 17492 18027 14619 12757 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12681000 18959 4688 17788 35972 28810 28810 1 9606 Homo sapiens -0.048811709250230706 MQQHFEFEYQTK Unmodified 1614.7137 0.71367774 3409 P08243-2;P08243;P08243-3;B4DY32;F8WEJ5;C9J057;C9JT45;C9JM09 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 6.5 0.5 1 1 48.826 48.908 3 0.00012423 13439 20230619_1886_Aki_TMTPro18x_K_F6 107.93 97.292 128910 96558 108210 113780 86106 115720 102250 96005 124200 131890 135600 181010 154690 143230 167370 155960 157310 202070 118980 88580 111350 113530 91876 116400 102890 100480 125800 132860 139790 180050 157940 149650 169360 159140 150920 191270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 213890000 18960 3409 17789 35973;35974 28811 28811 1 9606 Homo sapiens -0.06909054776224366 MQQHFEFEYQTK Oxidation (M) 1630.7086 0.70859237 3409 P08243-2;P08243;P08243-3;B4DY32;F8WEJ5;C9J057;C9JT45;C9JM09 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 1 0 6 0 1 45.302 45.388 3 0.0020909 11838 20230619_1886_Aki_TMTPro18x_K_F6 82.202 55.7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18961 3409 17789 35975 28812 28812 2025 1 9606 Homo sapiens -0.08153358638833197 MQQQLDEYQELLDIK Oxidation (M) 1908.9139 0.91389369 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;B4DFR3 LMNA Prelamin-A/C;Lamin-A/C yes no 0 1 0 4.5 0.5 1 1 62.366 62.392 3 1.3899E-10 19335 20230619_1883_Aki_TMTPro18x_K_F4 147.56 130.88 121480 110590 112200 149030 198670 172480 185820 191900 218950 166080 202740 205520 172600 175560 204200 215950 162710 213040 112340 101520 116250 147590 198850 173160 189030 193980 220330 170490 207550 205950 178760 184040 204900 216170 156430 202200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 876920000 18962 1428 17790 35976;35977 28813;28814 28813 907 2 9606 Homo sapiens -0.004206696899473172 MQQQLDEYQELLDIK Unmodified 1892.919 0.91897907 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;B4DFR3 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 6 0.816 1 1 1 63.573 63.615 3 7.2146E-11 19570 20230619_1885_Aki_TMTPro18x_K_F5 161.04 143.76 700850 556350 591910 849620 790980 867060 979680 1181100 1110900 838230 1010600 1044300 1011200 972180 1069500 1020100 1041000 1088100 647100 511720 615150 833770 811110 882050 980820 1175100 1119100 871760 1042200 1048900 1035500 1007200 1084700 1028500 996580 1032600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2137699999.9999998 18963 1428 17790 35978;35979;35980 28815;28816;28817 28815 3 9606 Homo sapiens 0.008236341726842511 MQQSVYVK Oxidation (M) 997.49027 0.49026674 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 1 0 8 0 1 40.104 40.093 2 0.0026666 9524 20230619_1888_Aki_TMTPro18x_K_F8 119.21 78.224 32866 25446 32297 34672 34179 33107 34647 43410 40826 34039 40700 42271 40929 38908 38848 40414 60274 47618 30376 23375 32891 34244 35336 33834 35128 43363 41211 35148 41787 42438 41723 40312 40722 40990 57375 45198 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18800000 18964 380 17791 35981 28818 28818 234 1 9606 Homo sapiens -0.008578786998214127 MQQYDLQGQPYGTR Unmodified 1683.7675 0.76750423 2281 B2RA56;Q969V3-2;Q969V3 NCLN Nicalin yes no 0 0 0 7 0 1 46.833 46.921 2 0.0093993 12152 20230619_1887_Aki_TMTPro18x_K_F7 87.363 80.157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18965 2281 17792 35982 28819 28819 1 9606 Homo sapiens -0.04702882344531645 MQSDDVIWDTLGNK Acetyl (Protein N-term);Oxidation (M) 1678.7509 0.75085111 4467 Q9BXY0;A0PJ56 MAK16 Protein MAK16 homolog yes no 1 1 0 2 0.816 1 1 1 63.977 63.99 2 2.0335E-08 20128 20230619_1882_Aki_TMTPro18x_K_F3 79.974 70.541 43041 36263 39967 42600 38985 49832 48181 46578 46805 44105 42772 50878 54066 46958 47637 61974 53240 66644 39783 33251 40870 42601 40865 49752 48003 47750 47611 44917 44634 51221 54533 49363 48948 62248 50979 63200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 81988000 18966 4467 17793 35983;35984;35985 28820;28821;28822 28822 2781 3 9606 Homo sapiens -0.06137428021133928 MQSDDVIWDTLGNK Acetyl (Protein N-term) 1662.7559 0.75593649 4467 Q9BXY0;A0PJ56 MAK16 Protein MAK16 homolog yes no 1 0 0 3 0.816 1 1 1 65.221 65.238 2 3.5102E-07 20648 20230619_1882_Aki_TMTPro18x_K_F3 103.7 93.468 20771 19907 20357 24344 19362 25568 26160 26250 26813 29355 21384 25628 30515 24090 25408 33416 30013 31451 19224 18252 20732 24234 20400 25767 25998 26850 27099 29381 22628 26126 30608 25405 26224 33293 28682 29888 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 66959000 18967 4467 17793 35986;35987;35988 28823;28824;28825 28824 3 9606 Homo sapiens -0.0489312415850236 MQSFGMK Oxidation (M) 843.3619 0.3618951 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;A0A286YFA2;A0A286YFL2;Q9UMY2;A0A286YFM8;A0A286YF78;A0A286YFE1 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase yes no 0 1 0 1.67 0.471 1 2 43.58 43.635 2;3 0.011487 11920 20230619_1881_Aki_TMTPro18x_K_F2 84.916 71.879 280540 230690 263310 267620 320030 333180 264120 253960 326330 261610 351650 404790 288560 285230 452250 287870 435560 385430 259280 211520 269720 268090 326430 330230 271550 265270 329630 268470 357520 400140 304570 298150 455130 295250 416550 365230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 125690000 18968 1334 17794 35989;35990;35991 28826;28827;28828 28828 844;845 3 9606 Homo sapiens -0.06605137214557999 MQSPAVLVTSR Acetyl (Protein N-term);Oxidation (M) 1245.6387 0.63872189 2978 F6TR53;Q9H7U7;Q53T59;B5MC96;A0A494C0K6;A0A0D9SFN1 HS1BP3 HCLS1-binding protein 3 yes no 1 1 0 5 0 1 46.994 47.07 2 0.0045249 12501 20230619_1885_Aki_TMTPro18x_K_F5 60.434 34.325 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18969 2978 17795 35992 28829 28829 1763 1 9606 Homo sapiens 0.02572807483215911 MQSTLISAAR Unmodified 1076.5648 0.56482866 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;B4DN49;B4DL39;B4DSB9;Q0ZAI9;Q0ZAJ0 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 2 0 1 45.424 45.505 2 0.0081707 12382 20230619_1881_Aki_TMTPro18x_K_F2 82.954 33.418 171350 121820 131930 146270 147530 171610 167150 151430 215680 148350 162640 160280 162260 137450 155500 171490 192020 160800 158010 111800 137640 146030 152780 171130 168790 156070 214620 150620 169330 161460 165360 144310 160330 171160 183160 152960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63857000 18970 3585 17796 35993 28830 28830 1 9606 Homo sapiens 0.02960884111530504 MQSTLISAAR Oxidation (M) 1092.5597 0.55974328 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;B4DN49;B4DL39;B4DSB9;Q0ZAI9;Q0ZAJ0 MSH2 DNA mismatch repair protein Msh2 yes no 0 1 0 8 0 1 38.639 38.626 2 0.0014237 8938 20230619_1888_Aki_TMTPro18x_K_F8 100.57 72.17 37387 29881 34944 36908 31112 44086 34480 39362 48582 26823 34278 33964 29993 27035 34395 42845 40931 32424 34547 27418 35663 36788 32821 43895 35019 40197 48032 28039 35658 33973 30988 28918 35304 42193 39040 30938 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32846000 18971 3585 17796 35994 28831 28831 2255 1 9606 Homo sapiens 0.01716580248921673 MQTDKPFDQTTISLQMGTNK Unmodified 2283.0875 0.087517738 3933 Q15417;Q15417-3;Q15417-2;E9PDU6 CNN3 Calponin-3;Calponin yes no 0 0 1 2 0 1 56.435 56.453 3 1.1168E-29 17176 20230619_1881_Aki_TMTPro18x_K_F2 205.24 195.96 53964 46504 57386 47534 26173 33467 31612 36681 31401 51940 51808 45298 51223 41960 41742 47942 48703 43043 49942 42585 57463 47797 29829 35011 31660 37669 32893 51425 52113 46178 51825 43717 43029 47796 46492 40955 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19589000 18972 3933 17797 35995 28832 28832 1 9606 Homo sapiens -0.002702519759623101 MQTDKPFDQTTISLQMGTNK 2 Oxidation (M) 2315.0773 0.077346983 3933 Q15417;Q15417-3;Q15417-2;E9PDU6 CNN3 Calponin-3;Calponin yes no 0 2 1 8 0 1 49.982 50.058 4 1.8194E-11 13529 20230619_1888_Aki_TMTPro18x_K_F8 131.31 111.58 56351 45623 54130 55120 48990 44702 48416 44802 45523 50947 68585 54556 56266 45555 59594 53142 50184 47529 52086 41851 55077 54763 51194 46038 48809 45970 47449 51251 68658 54970 57926 47687 59987 52998 48089 45212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130470000 18973 3933 17797 35996 28833 28833 2614;2615 1 9606 Homo sapiens -0.027588597012254468 MQTYQDAESR Oxidation (M) 1243.5139 0.5139153 4532 Q9H857-4;Q9H857;Q9H857-3;Q9H857-2;H7C519 NT5DC2 5'-nucleotidase domain-containing protein 2 yes no 0 1 0 2 0 1 31.233 31.295 2 0.048722 6219 20230619_1881_Aki_TMTPro18x_K_F2 63.408 48.257 8381.6 6602.5 8908.9 10598 11263 13920 13706 12913 14521 10282 15945 13803 12034 10688 9623.2 8491.6 14462 12482 7752.4 6076.8 9057.6 10409 11586 13789 13697 13193 14774 10646 16101 13751 12297 11013 10087 8797.9 13777 11821 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6290200 18974 4532 17798 35997 28834 28834 2806 1 9606 Homo sapiens -0.09810109723980531 MQVDEAASR Oxidation (M) 1021.4499 0.44985848 2232 B2R6A9;Q9BW71-2;Q9BW71;Q9BW71-3 HIRIP3 HIRA-interacting protein 3 yes no 0 1 0 1 0 1 29.615 29.615 2 0.043591 5845 20230619_1880_Aki_TMTPro18x_K_F1 66.056 38.231 8763.1 3363 11641 12269 13919 15463 9752.5 12463 15665 11332 15404 15502 15856 14965 17810 6220.5 16800 16346 8098.2 3159.2 11621 11678 14172 15305 10270 12904 15599 11653 15841 15512 16268 15000 17953 6999.1 16080 15419 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5656100 18975 2232 17799 35998 28835 28835 1392 1 9606 Homo sapiens -0.06000845090261464 MQVDPQK Oxidation (M) 860.4062 0.40620276 669 Q8NCF7;A0A024RBE8;A0A024RBH9;Q00325-2;Q00325;F8VVM2;Q53HC3;B2RE88;F8VWR4;F8VWQ0 SLC25A3 Phosphate carrier protein, mitochondrial yes no 0 1 0 4 0 1 35.268 35.316 2 0.040046 7659 20230619_1883_Aki_TMTPro18x_K_F4 85.064 40.617 33648 19041 44204 45136 94056 101440 52243 62181 48359 26361 49097 52862 37880 41823 52763 22526 52882 53293 31134 17661 44771 44079 92572 97329 55008 65224 49462 29422 49910 52077 39787 42469 53225 24772 50599 50290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29928000 18976 669 17800 35999 28836 28836 414 1 9606 Homo sapiens -0.029584097967244816 MQVDPQK Unmodified 844.41129 0.41128813 669 Q8NCF7;A0A024RBE8;A0A024RBH9;Q00325-2;Q00325;F8VVM2;Q53HC3;B2RE88;F8VWR4;F8VWQ0 SLC25A3 Phosphate carrier protein, mitochondrial yes no 0 0 0 5.5 0.5 1 1 41.263 41.353 2 0.006426 10097 20230619_1885_Aki_TMTPro18x_K_F5 133.12 85.268 91470 55536 112470 125170 219400 236450 129900 137370 150670 77361 125010 141740 101920 98507 137390 62325 131850 135710 84604 51443 114160 121880 216970 228230 136810 145550 151090 83551 128640 139410 106520 101130 138360 67571 126230 128100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59329000 18977 669 17800 36000;36001 28837 28837 1 9606 Homo sapiens -0.017141059341156506 MQVDQEEPHVEEQQQQTPAENK Oxidation (M) 2637.1613 0.16128762 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B4DSE8 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 1 0 1.5 0.5 1 1 38.52 38.552 4 6.6363E-08 9457 20230619_1880_Aki_TMTPro18x_K_F1 100.94 93.409 18387 10051 24700 20138 35896 40662 31611 30238 43139 27432 39634 49423 42978 41815 41033 33230 44581 48433 17015 9296.7 24713 19759 36295 39292 32463 31530 43095 28587 41044 48880 43703 42911 41911 34415 42647 45827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125430000 18978 3544 17801 36002;36003 28838 28838 2206 1 9606 Homo sapiens -0.09180657070510279 MQVEHPEK Oxidation (M) 1012.4648 0.46478027 4243 Q8NBJ5;M0QX72;Q8WUI9;Q9H6F1;Q6IPW8;B3KQ10 COLGALT1;GLT25D1 Procollagen galactosyltransferase 1 yes no 0 1 0 3 0 1 31.013 31.099 3 0.023051 6009 20230619_1882_Aki_TMTPro18x_K_F3 63.076 41.612 17822 15236 24981 21600 33392 29177 26173 23859 27458 21327 25599 29399 25961 24082 33853 13189 31419 22862 16539 13997 24876 21388 33742 28822 26849 24683 27817 21949 26416 29256 26870 24440 34029 14046 30025 21643 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14117000 18979 4243 17802 36004 28839 28839 2708 1 9606 Homo sapiens -0.04095353222248832 MRAEDGENYDIK Oxidation (M) 1455.63 0.63000769 2886 E5RIW3;Q6FGD7;E5RJD8;O75347;E5RHG6;E5RIX8;O75347-2;A0A494C144 TBCA Tubulin-specific chaperone A yes no 0 1 1 2.5 0.5 1 1 38.014 38.072 3 0.024154 8925 20230619_1881_Aki_TMTPro18x_K_F2 64.104 43.997 371390 289720 295500 291600 347570 380970 327260 333670 399240 459420 517990 504220 490230 441900 409880 623240 610560 560850 342740 265370 307210 295690 356660 377560 333520 347400 407600 458880 524420 508080 497760 467220 430460 619220 581890 533550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 634250000 18980 2886 17803 36005;36006 28840;28841 28840 1712 2 9606 Homo sapiens -0.07958210943934318 MRAEDGENYDIK Unmodified 1439.6351 0.63509307 2886 E5RIW3;Q6FGD7;E5RJD8;O75347;E5RHG6;E5RIX8;O75347-2;A0A494C144 TBCA Tubulin-specific chaperone A yes no 0 0 1 1.5 0.5 1 1 41.919 41.959 3 0.00012226 10721 20230619_1881_Aki_TMTPro18x_K_F2 112.42 79.014 242210 193060 249940 225610 236230 313590 240110 243300 288310 319480 370490 378880 400150 311770 295660 450480 444190 445270 223990 177050 252950 226370 247040 308720 243550 255410 294390 320600 377450 379870 402410 331220 311540 449640 423570 422970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162780000 18981 2886 17803 36007;36008 28842 28842 1 9606 Homo sapiens -0.0671390708130275 MRAEDGENYDIKK Unmodified 1567.7301 0.73005609 2886 E5RIW3;Q6FGD7;E5RJD8;O75347;E5RHG6;E5RIX8;O75347-2;A0A494C144 TBCA Tubulin-specific chaperone A yes no 0 0 2 5 0 1 41.13 41.217 3 1.3893E-05 10036 20230619_1885_Aki_TMTPro18x_K_F5 126.5 105.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18982 2886 17804 36009 28843 28843 1 9606 Homo sapiens -0.031099736101396047 MREDYDSVEQDGDEPGPQR Oxidation (M) 2237.9131 0.91311843 6 A0A023T787;Q9Y5S9;Q9Y5S9-2 RBM8;RBM8A RNA-binding protein 8A yes no 0 1 1 1 0 2 36.386 36.386 3 2.609E-19 8316 20230619_1880_Aki_TMTPro18x_K_F1 178.22 174.04 99382 75460 84445 91770 110300 108230 98788 97972 106910 108150 119540 118020 123750 103910 109590 134210 115960 113890 91740 69243 87434 91550 112150 108000 100540 101070 109000 109060 122230 118950 125480 109220 112180 133190 110880 108400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1047899999.9999999 18983 6 17805 36010;36011 28844;28845;28846 28845 1 3 9606 Homo sapiens -0.1563216086756256 MREDYDSVEQDGDEPGPQR Unmodified 2221.9182 0.9182038 6 A0A023T787;Q9Y5S9;Q9Y5S9-2 RBM8;RBM8A RNA-binding protein 8A yes no 0 0 1 1.5 0.5 1 1 39.78 39.815 3 2.011E-60 9982 20230619_1880_Aki_TMTPro18x_K_F1 299.71 276.02 281860 218710 244290 267760 261040 304120 291990 278320 309330 336480 334700 342060 407400 323250 306280 388200 360220 388810 260260 200690 251710 266840 270850 304160 293160 287700 315410 337110 345360 346400 408530 337620 316660 388860 344330 369190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 970470000 18984 6 17805 36012;36013 28847;28848 28847 2 9606 Homo sapiens -0.14387857004930993 MREEENEGIVQLR Unmodified 1601.7832 0.78315429 4313 Q93034;L0L6C1 CUL5 Cullin-5 yes no 0 0 1 2 0 1 42.122 42.202 3 9.3133E-07 10816 20230619_1881_Aki_TMTPro18x_K_F2 143.31 103.65 149400 127490 145790 147030 159160 175830 170370 174290 209590 163510 185000 167150 195340 165470 174770 221000 198100 225730 138150 116870 148610 147310 164620 175590 172340 177830 210170 166050 191290 169700 198090 173700 179640 221290 189510 214250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76593000 18985 4313 17806 36014 28849;28850 28850 2 9606 Homo sapiens 0.006334041725267525 MREEVITLIR Oxidation (M) 1274.7017 0.70165649 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;A0A0J9YXZ5;Q6P1N4;Q96PA3 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 1 1 7 0 1 43.923 44.006 3 0.060489 10928 20230619_1887_Aki_TMTPro18x_K_F7 52.391 32.104 36732 27288 30646 32575 40643 42526 41868 38252 46164 38005 41762 40720 36113 33548 43337 43262 51468 40894 33899 25037 31801 32594 41455 42156 42255 39370 46582 38522 42819 40988 37416 35336 44385 43189 49092 38905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43971000 18986 707 17807 36015 28851 28851 428 1 9606 Homo sapiens 0.07529373271245277 MREEVITLIR Unmodified 1258.7067 0.70674187 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;A0A0J9YXZ5;Q6P1N4;Q96PA3 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 1 8 0 1 49.977 50.054 3 1.6481E-07 13533 20230619_1888_Aki_TMTPro18x_K_F8 168.3 117.21 91806 84569 94391 90564 84673 103250 96371 101110 114490 123790 112470 119290 137330 110310 125540 139790 122980 142350 84977 77455 95511 91193 89124 103410 97096 104020 115630 123750 116640 120990 138750 115690 127810 140100 117830 135100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231170000 18987 707 17807 36016 28852 28852 1 9606 Homo sapiens 0.08773677133876845 MREEYGIQAEER Unmodified 1509.6882 0.68819128 797 A0A075B7B1;O15061-2;O15061;C9JIE4;O15061-3 SYNM Synemin yes no 0 0 1 2 0 1 37.541 37.601 3 0.0020901 8749 20230619_1881_Aki_TMTPro18x_K_F2 82.515 60.958 30617 20163 29031 40487 47311 47970 37286 43060 52558 38180 52648 53974 47471 40763 46306 39702 66286 52571 28264 18632 29960 39255 47425 47799 38650 44193 52622 39351 53789 53622 48583 42433 48164 40660 63133 49846 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38616000 18988 797 17808 36017 28853 28853 1 9606 Homo sapiens -0.04626529298616333 MREHLELFWSR Oxidation (M) 1518.7402 0.74016727 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;J3KS13 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 1 1 0 1 45.8 45.8 4 0.00053538 12611 20230619_1880_Aki_TMTPro18x_K_F1 118.87 103.32 19490 16351 21358 21527 17231 14966 18431 15286 25510 19684 17189 19530 24403 21751 27314 27638 20203 25166 18039 15010 21471 21231 18232 15654 18731 15737 25253 19675 18373 19915 24819 22668 27335 27541 19434 23911 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44058000 18989 826 17809 36018 28854 28854 488 1 9606 Homo sapiens 0.0015467890575564525 MREIVHLQAGQCGNQIGAK Unmodified 2109.0572 0.057161084 3748;3381;3201 Q8IZ29;P68371;Q8N6N5;Q8IWP6;B4DNW1;M0R2T4;M0R2D3;P04350;B4DJ43;B4DFH6;M0QY85;M0R0X0;M0QY37;M0QX14;M0QYM7;M0R042 TUBB2C;TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 0 1 2.5 0.5 2 2 44.035 44.111 3;4 3.4035E-31 11749 20230619_1881_Aki_TMTPro18x_K_F2 231.37 0 470120 535280 512520 403620 458690 400030 427960 462060 359180 470710 451580 426270 450740 381340 576280 504270 513700 476880 436090 488670 515400 419410 478690 407160 431770 467840 374170 473490 459170 433430 465920 401380 579920 503480 491860 453370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3765899999.9999995 18990 3748;3201;3381 17810 36019;36020;36021;36022 28855;28856 28855 2 9606 Homo sapiens 0.04699478940210611 MRELLAR Oxidation (M) 903.49602 0.49602082 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 1 1 8 0 1 31.195 31.206 3 0.040506 6055 20230619_1888_Aki_TMTPro18x_K_F8 72.234 43.721 45917 50781 40961 39124 81272 66410 47272 61318 69156 23422 31592 29283 25156 21690 44916 27592 30834 23621 42514 46369 42576 40889 80191 65067 50309 61914 67596 25957 33918 29256 26827 22921 44451 27470 29588 22504 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48584000 18991 1488 17811 36023 28857 28857 998 1 9606 Homo sapiens 0.040412646025060894 MREQQALSR Unmodified 1117.5662 0.56622565 4243 Q8NBJ5;Q8WUI9;Q9H6F1;B3KQ10 COLGALT1;GLT25D1 Procollagen galactosyltransferase 1 yes no 0 0 1 7 0.816 1 1 1 29.753 29.804 3 0.00031518 5605 20230619_1888_Aki_TMTPro18x_K_F8 111.06 74.662 31467 22898 28743 27947 42268 38929 30553 35881 36488 26123 32500 31298 28976 28396 35860 23738 35952 30793 29056 21016 29608 27957 42476 38479 31684 36583 36652 27098 33386 31442 30039 29132 36278 24369 34362 29191 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29496000 18992 4243 17812 36024;36025;36026 28858;28859 28859 2 9606 Homo sapiens 0.01214518200299608 MREVCDEVK Unmodified 1164.5267 0.5267286 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4;H0YIZ0;G3V2Y4 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 1 3.5 0.5 1 1 39.708 39.757 3 0.00075214 9489 20230619_1882_Aki_TMTPro18x_K_F3 96.009 69.411 263220 206200 241870 218990 339840 339970 311450 317920 364730 322540 386890 439990 373440 322890 385800 394510 442710 414350 243160 188950 248790 221850 344310 334230 317300 326300 369300 329300 395740 437270 382250 340610 395270 396400 422830 393440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 297490000 18993 657 17813 36027;36028 28860;28861 28860 2 9606 Homo sapiens -0.04895369865448629 MRFDEIFLK Unmodified 1197.6216 0.62161526 449 A5PKY0;A0A024R7G6;M0R165;A8K5P4;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2;B4DQX5;B4DME4 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 1 2 0 1 60.58 60.592 3 0.0010463 18862 20230619_1881_Aki_TMTPro18x_K_F2 103.7 42.303 45547 34975 41719 42226 31321 38204 37634 39032 49382 38537 34151 34576 40623 32576 41610 44215 44101 44612 42071 32089 42542 42008 33585 38954 37958 39814 49017 38876 36053 35228 41302 34301 42446 44256 42175 42366 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31451000 18994 449 17814 36029 28862 28862 1 9606 Homo sapiens 0.030709316680486154 MRGEAEAFAIGAR Unmodified 1377.6823 0.68231804 1163 A0A140T9W4;A2VCL5;A0A140T9R1;Q6IB58;Q5ST80;Q53HQ0;O75955-2;O75955 FLOT1 Flotillin-1 yes no 0 0 1 7 0 1 44.081 44.164 3 4.0478E-06 10993 20230619_1887_Aki_TMTPro18x_K_F7 112.42 92.219 54535 44645 52194 49841 53250 57779 56279 57114 69303 62776 57762 61948 71211 60307 56465 81134 81267 74506 50409 40922 53214 50040 55325 57825 56977 58533 69424 63137 60413 62896 71588 63359 59178 80749 77469 70861 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53816000 18995 1163 17815 36030 28863 28863 1 9606 Homo sapiens 0.008584169803498298 MRGETTLWNPGCDHAGIATQVVVEK Unmodified 2768.3374 0.33741827 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;P26640-2 VARS Valine--tRNA ligase yes no 0 0 1 8 0 1 52.795 52.87 4 0.048656 14830 20230619_1888_Aki_TMTPro18x_K_F8 46.404 33.97 25879 24439 26485 27872 24596 25166 28275 28329 31144 31090 28703 25065 32680 25340 34777 31957 31154 32457 23957 22394 26832 27843 25778 25740 28391 28798 31483 31088 29727 25745 33306 26501 35111 32044 29852 30817 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134260000 18996 725 17816 36031 28864 28864 1 9606 Homo sapiens 0.023983056296856375 MRPGEATLSC Oxidation (M) 1136.4954 0.49542847 3670 P57081;P57081-2;P57081-3 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes no 0 1 1 4 0 1 34.498 34.548 2 0.077505 7390 20230619_1883_Aki_TMTPro18x_K_F4 54.611 46.671 17137 11970 15789 16704 17510 14779 16789 17241 18323 21496 20771 21768 20279 16782 17497 20779 21727 17571 15821 11004 16175 16455 17999 15158 17025 17558 18698 21492 21178 21906 20580 17682 18091 20631 20719 16739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13922000 18997 3670 17817 36032 28865 28865 2370 1 9606 Homo sapiens -0.06735942899535985 MRPGVACSVSQAQK Oxidation (M) 1533.7392 0.73918099 3540 Q53Z07;P32969;A0A2R8Y5Y7;H0Y9V9 RPL9 60S ribosomal protein L9 yes no 0 1 1 2.5 0.5 1 1 34.705 34.764 3 0.0003554 7550 20230619_1881_Aki_TMTPro18x_K_F2 94.45 62.121 192750 122210 171150 180330 186180 230350 207540 210030 315090 141200 110320 123660 163350 126060 139880 229250 219970 174090 177810 112470 175980 177920 193230 228500 211150 214090 306280 146260 125230 126670 164080 135410 147550 225320 209370 166110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 235130000 18998 3540 17818 36033;36034 28866;28867 28866 2201 2 9606 Homo sapiens -0.006339035254541159 MRPGVACSVSQAQK Unmodified 1517.7443 0.74426637 3540 Q53Z07;P32969;A0A2R8Y5Y7;H0Y9V9 RPL9 60S ribosomal protein L9 yes no 0 0 1 3.5 0.5 1 1 38.142 38.19 3 1.9815E-08 8777 20230619_1883_Aki_TMTPro18x_K_F4 147.31 110.37 218810 149960 203070 197310 215050 276660 241260 234880 319790 163010 129860 137970 197240 153010 175860 234220 229140 177840 202000 137770 207800 196390 223610 272600 244000 240870 313400 168230 145210 141950 198240 161640 182430 230720 218360 169700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 282700000 18999 3540 17818 36035;36036 28868;28869 28869 2 9606 Homo sapiens 0.006104003371547151 MRPLTEEETR Oxidation (M) 1276.6082 0.60815004 4698 Q9Y221;J3QLW7;B3KM49;Q9Y221-2 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog yes no 0 1 1 2 0.816 1 1 1 28.841 28.903 3 0.029081 5627 20230619_1880_Aki_TMTPro18x_K_F1 64.121 38.004 27365 15072 25665 29733 37314 41632 32729 34409 42646 34580 43518 46419 46256 38374 37847 40911 46887 45186 25239 13936 26414 28940 37738 40999 33569 35649 42893 35319 44736 46311 46721 39984 39147 41306 44762 42879 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102000000 19000 4698 17819 36037;36038;36039 28870;28871 28870 2861 2 9606 Homo sapiens -0.019089709018544454 MRPLTEEETR Unmodified 1260.6132 0.61323542 4698 Q9Y221;J3QLW7;B3KM49;Q9Y221-2 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog yes no 0 0 1 2.5 0.5 1 1 34.961 35.02 3 0.00018537 7676 20230619_1881_Aki_TMTPro18x_K_F2 109.24 88.773 43882 28736 47729 50754 55512 79087 61318 56720 81327 69826 73558 83938 87548 68809 66299 80669 91085 101070 40556 26504 48332 49756 57362 77221 62077 59839 81389 70346 76492 84023 87887 72158 69238 81964 86979 95744 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123230000 19001 4698 17819 36040;36041 28872 28872 1 9606 Homo sapiens -0.006646670392228771 MRQDPAHPHVVATGGK Oxidation (M) 1715.8526 0.85257126 2945 E9PS41;Q6RFH5;Q6RFH5-2;B4E018 WDR74 WD repeat-containing protein 74 yes no 0 1 1 8 0 1 29.43 29.451 5 0.008033 5432 20230619_1888_Aki_TMTPro18x_K_F8 66.335 52.932 19145 13417 21874 21217 24682 26650 22390 25326 28449 18086 27127 28344 28337 19255 25913 18613 26687 23963 17708 12353 22029 20850 25352 26493 22908 25766 28543 18989 27954 27998 28731 20149 26392 19041 25508 22713 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26079000 19002 2945 17820 36042 28873 28873 1751 1 9606 Homo sapiens 0.023279079119220114 MRSEPDDSDPFSFDGPEIMGCTGCQIDWK Unmodified 3376.3781 0.37809839 661;2990 F8W543;B7Z4K9;P55209;F8VY35;H0YIV4;B7Z2V4;F5H4R6;F8W0J6;F8VUX1;A0A024RBB7;P55209-2;F8VV59;B7Z9C2;A0A024RBE6;P55209-3 NAP1L1 Nucleosome assembly protein 1-like 1 no no 0 0 1 5 0 1 62.755 62.801 4 0.0036419 19207 20230619_1885_Aki_TMTPro18x_K_F5 67.778 62.513 20987 21908 20579 19432 14968 18523 18424 17440 17609 25521 20923 19757 29477 25579 23261 25270 24150 29635 19437 20027 20847 19840 16095 18792 18366 18111 18167 25180 21678 20513 29517 26192 23824 25638 23136 28081 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80133000 19003 2990;661 17821 36043 28874 28874 1 9606 Homo sapiens -0.21503553685943189 MSAEDIEK Unmodified 921.41135 0.41134771 4682 Q9ULC4;Q9ULC4-3;Q9ULC4-2;A0A3B3IRV3 MCTS1 Malignant T-cell-amplified sequence 1 yes no 0 0 0 2 0 1 45.167 45.248 3 0.0068274 12226 20230619_1881_Aki_TMTPro18x_K_F2 79.906 27.425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19004 4682 17822 36044 28875 28875 1 9606 Homo sapiens -0.05250150724782543 MSAGSATHPGAGGRR Oxidation (M) 1427.6688 0.66879324 2007 D3DVA4;A8K1I7;Q7Z7F0-3;Q7Z7F0-2;Q7Z7F0;A0A0S2Z5A4;A0A0S2Z5B9;Q7Z7F0-4 KIAA0907 UPF0469 protein KIAA0907 yes no 0 1 1 4 0 1 58.939 58.941 2 0.048598 17881 20230619_1883_Aki_TMTPro18x_K_F4 43.77 28.509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19005 2007 17823 36045 28876 28876 1262 1 9606 Homo sapiens -0.027934407989505416 MSASDPNSSIFLTDTAK Oxidation (M) 1799.8247 0.82474434 401 P23381;A0A024R6K8;P23381-2;H0YJP3 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 1 0 5.5 0.5 1 1 53.624 53.698 3 9.963E-07 15480 20230619_1886_Aki_TMTPro18x_K_F6 114.01 103.67 174640 142300 183920 181830 176170 181700 178120 176960 217660 217650 251220 294530 259480 238300 266650 281410 297860 364630 161560 130600 185900 180400 183590 183690 180800 182280 220840 220110 256870 293510 265050 249950 272840 286680 285150 345200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 308940000 19006 401 17824 36046;36047 28877;28878;28879 28878 255 3 9606 Homo sapiens -0.04317504649475268 MSASDPNSSIFLTDTAK Unmodified 1783.8298 0.82982971 401 P23381;A0A024R6K8;P23381-2;H0YJP3 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 0 0 5.5 0.5 1 1 57.311 57.376 3 1.1733E-23 17010 20230619_1886_Aki_TMTPro18x_K_F6 164.01 143.63 76184 57645 66686 82499 58495 75145 78153 79413 81973 94632 91502 108200 112990 85820 95364 116050 103180 121970 70340 52989 68522 81139 62032 76596 77800 81264 83751 95187 94488 108430 113730 90911 97834 116400 98773 115710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 257460000 19007 401 17824 36048;36049 28880 28880 1 9606 Homo sapiens -0.030732007868436995 MSATFIGNSTAIQELFK Oxidation (M) 1872.9291 0.92914983 3748;1424;3870 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;Q8IZ29;P68371;Q8N6N5;B3KML9;Q96HX0;Q13885;B2R6L0 TUBB2B;DKFZp566F223;TUBB2C;TUBB4B;TUBB2A Tubulin beta-2B chain;Tubulin beta-4B chain;Tubulin beta-2A chain no no 0 1 0 2 0 1 63.438 63.446 3 1.3605E-13 20161 20230619_1881_Aki_TMTPro18x_K_F2 153.72 8.7511 225260 119310 186920 302080 288420 372360 310950 260080 423370 348990 399950 416570 375090 286570 367330 320950 439820 583760 207540 110840 195430 290270 292860 368120 315340 276060 423680 350240 410450 415150 383090 302300 377440 336700 421110 551150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4100399999.9999995 19008 1424;3748;3870 17825 36050 28881 28881 897 1 9606 Homo sapiens 0.027602418979085996 MSATFIGNSTAIQELFK Unmodified 1856.9342 0.93423521 3748;1424;3870 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;Q8IZ29;P68371;Q8N6N5;B3KML9;Q96HX0;Q13885;B2R6L0 TUBB2B;DKFZp566F223;TUBB2C;TUBB4B;TUBB2A Tubulin beta-2B chain;Tubulin beta-4B chain;Tubulin beta-2A chain no no 0 0 0 3 0.816 1 1 1 64.456 64.472 3 8.8094E-31 20315 20230619_1882_Aki_TMTPro18x_K_F3 200.94 10.121 321220 188340 281540 399010 242230 455990 362980 393050 467400 466610 453020 653990 322760 461560 205390 584660 257480 750070 296200 174300 289710 385750 259710 454420 362210 407900 469540 473250 460830 648200 329270 488200 216180 593520 249260 708860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1197200000 19009 1424;3748;3870 17825 36051;36052;36053 28882 28882 1 9606 Homo sapiens 0.04004545760540168 MSAYAFFVQTCR Unmodified 1479.6639 0.66389078 3240 O15347;E9PES6;E7ES08;E7EQU1;Q7Z684;Q16466 HMGB3;DKFZp779G118 High mobility group protein B3 yes no 0 0 0 6 0 1 61.536 61.591 3 3.224E-07 18803 20230619_1886_Aki_TMTPro18x_K_F6 158.04 141.1 51273 47507 45582 49114 51767 66080 60711 55500 77721 33188 31643 29007 27811 28905 47928 34148 32977 30482 47406 43497 46912 49703 53630 65278 61158 56841 76225 34714 34492 29668 29510 30071 47481 34075 31680 29000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158430000 19010 3240 17826 36054 28883 28883 1 9606 Homo sapiens -0.05675460985889913 MSDDIRK Acetyl (Protein N-term) 905.42767 0.42766648 4078 Q5VW36 FOCAD Focadhesin yes yes 1 0 1 1.5 0.5 1 1 35.391 35.42 3 0.058077 8138 20230619_1880_Aki_TMTPro18x_K_F1 41.302 9.3667 147970 142420 143850 138740 228390 170700 174430 186240 171560 163220 166480 146760 190340 134160 152580 175730 191230 151490 136950 130320 147600 140980 228410 170840 178950 188470 174880 165650 171940 149450 191550 141120 158060 174510 182320 144290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158360000 19011 4078 17827 36055;36056 28884 28884 1 9606 Homo sapiens -0.028830247680275534 MSDGLFLQK Unmodified 1037.5216 0.52156686 2501 B4DJB4;H0YL72;B4DSY4;Q53GF8;P50213;B7Z9J8;P50213-2 IDH3A Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 8 0 1 57.374 57.426 3 0.058664 16747 20230619_1888_Aki_TMTPro18x_K_F8 37.065 19.739 74724 61724 77645 87796 70927 93215 90490 78875 112750 90950 88776 96163 110460 86331 90612 102940 101520 109430 69122 56716 78620 86544 74865 93460 90750 81951 112600 91503 93201 97036 111070 90303 93159 103500 97080 103840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37946000 19012 2501 17828 36057 28885 28885 1 9606 Homo sapiens 0.004306943342498926 MSDKVLREEQVYTTK Oxidation (M) 1841.9193 0.91931342 1606 A0A6I8PRY6;A0A6I8PRP6;Q96KV2;Q9Y3H6;Q6ZV26;B4DPY1;Q92802-3;A0A6I8PU16 92M18.3;hCG_33128;N4BP2L2 yes no 0 1 2 3 0 1 62.715 62.746 4 0.035379 19562 20230619_1882_Aki_TMTPro18x_K_F3 48.823 30.765 181110 145580 160680 188950 171280 230530 199890 203540 297860 35811 30142 26862 36649 25062 64665 37883 34037 25786 167290 133650 165330 187720 178400 229140 202680 205350 286320 45444 43842 27793 38604 26607 63420 37275 32805 24650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167880000 19013 1606 17829 36058 28886 28886 1048 1 9606 Homo sapiens 0.03203053892548269 MSELSSSRPK Oxidation (M) 1136.5496 0.54957253 1003 Q59GQ7;A0A0C4DGA6;Q14527-2;Q14527;A8K5B6;Q05DF7;Q05DQ5;Q05BZ6 HLTF Helicase-like transcription factor yes no 0 1 1 7.5 0.5 1 1 32.6 32.644 3 0.016592 6382 20230619_1887_Aki_TMTPro18x_K_F7 68.786 48.482 43937 26606 45595 43682 49372 49048 38377 44123 51170 49144 64041 59835 57842 53674 57821 47941 67219 62755 40574 24524 46203 42763 50668 49071 39779 45543 51903 49732 64798 60050 59259 55263 59256 49137 64193 59465 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39515000 19014 1003 17830 36059;36060 28887 28887 565 1 9606 Homo sapiens -0.013240274763120397 MSEQQDLER Oxidation (M) 1150.4925 0.49245158 1731 A0A804HJA4;J3KN16;Q5VYK3;B3KXF2;R4GMY1 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 1 0 1 0 1 31.147 31.147 2 0.0016547 6430 20230619_1880_Aki_TMTPro18x_K_F1 108.93 89.152 23018 13422 20042 23295 33356 32137 22667 22702 32372 22177 28415 27386 26121 23709 27410 23542 32155 28745 21223 12383 20816 22800 33298 31606 23769 23832 32244 22632 29233 27445 26811 24567 28088 23966 30696 27259 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20487000 19015 1731 17831 36061 28888 28888 1135 1 9606 Homo sapiens -0.07677494752692837 MSEQQDLER Unmodified 1134.4975 0.49753696 1731 A0A804HJA4;J3KN16;Q5VYK3;B3KXF2;R4GMY1 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 1 0 1 36.533 36.533 2 0.0042459 8579 20230619_1880_Aki_TMTPro18x_K_F1 91.658 65.274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19016 1731 17831 36062 28889 28889 1 9606 Homo sapiens -0.06433190890061269 MSFQNLLAK Unmodified 1050.5532 0.55320134 1855 A0A8V8TQW4;O14617-4;O14617;O14617-5;O14617-2;O14617-3;B3KSV6;B0AZV8;K7ELX8 AP3D1 AP-3 complex subunit delta-1 yes no 0 0 0 4 0 1 61.482 61.485 3 0.088201 18931 20230619_1883_Aki_TMTPro18x_K_F4 43.308 12.039 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19017 1855 17832 36063 28890 28890 1 9606 Homo sapiens 0.029946870881985888 MSGVSNLR Oxidation (M) 878.428 0.42800083 4815 yes yes 0 1 0 5.33 0.471 2 1 43.76 43.844 2 0.082801 11135 20230619_1885_Aki_TMTPro18x_K_F5 62.714 14.541 + 386680 334020 345630 330130 380730 429560 374750 365750 462940 220140 207240 183660 204460 163850 316850 230970 232310 187420 357360 305780 354940 335250 392850 425480 380780 374160 455730 229700 224650 187710 214100 173230 315060 228880 222780 178640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 393050000 19018 4815 17833 36064;36065;36066 28891 28891 2922 1 9606 Homo sapiens -0.01607605048161531 MSISEGTVSDK Oxidation (M) 1168.5282 0.52816838 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 1 0 3.5 0.5 1 1 40.467 40.517 2 0.001238 9812 20230619_1882_Aki_TMTPro18x_K_F3 96.113 80.223 45650 34356 46069 50393 54455 63318 49322 53307 61796 60112 84573 81685 61914 65887 70482 63662 86330 91204 42193 31591 46916 49713 55806 62790 50449 55327 63100 61048 84693 81411 64412 68336 72358 65574 82480 86317 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61714000 19019 630 17834 36067;36068 28892 28892 372 1 9606 Homo sapiens -0.04935457295687229 MSISEGTVSDK Unmodified 1152.5333 0.53325376 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 3.5 0.5 1 1 46.285 46.346 3 0.00022429 12351 20230619_1883_Aki_TMTPro18x_K_F4 109.16 89.885 98488 71577 96583 101480 87764 95608 76605 100690 118620 95321 120860 110990 111710 98377 93947 113590 121160 116220 90991 65800 98134 99940 91647 97221 79308 102340 118450 97134 123380 111620 113500 102680 97453 114000 115630 110370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 519060000 19020 630 17834 36069;36070 28893 28893 1 9606 Homo sapiens -0.036911534330556606 MSLFYAEATPMLK Unmodified 1500.7357 0.73565874 572 Q9NUQ9;A0A024R9G4;A0A8V8TMP7;Q9NUQ9-2;Q3ZTR9;B3KRB1;Q9H0Q0 FAM49B;BM009;FAM49A Protein FAM49B;Protein FAM49A yes no 0 0 0 2.5 0.5 1 1 63.45 63.47 3 1.7825E-05 20178 20230619_1881_Aki_TMTPro18x_K_F2 118.87 100.76 122560 106520 143490 147430 118060 146260 119500 112420 125310 165160 138130 137290 152410 140180 148680 155870 166560 172590 113530 97823 143650 145460 124750 147170 120690 118660 128110 163230 141770 140670 155000 145350 152270 157300 159240 163730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 408020000 19021 572 17835 36071;36072 28894;28895 28894 2 9606 Homo sapiens 0.005320336479599064 MSNADFAK Oxidation (M) 898.38547 0.38546731 1555 A0A499FI31;Q15020;Q15020-4;B4DYA2 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 1 0 5 0 1 39.597 39.687 2 0.072383 9391 20230619_1885_Aki_TMTPro18x_K_F5 64.654 36.435 37267 30886 35371 42594 49875 46360 48300 48385 51950 46503 53814 54956 43282 37593 48090 35221 58631 47524 34448 28370 36345 42088 50546 46652 48896 49242 52767 47344 54683 54779 44752 39235 49320 36168 55919 45049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22986000 19022 1555 17836 36073 28896 28896 1019 1 9606 Homo sapiens -0.06779000176402405 MSNYDTDLFVPYFEAIQK Oxidation (M) 2196.0085 0.0085223609 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 1 0 7.5 0.5 1 1 64.534 64.559 3 1.2842E-09 19776 20230619_1888_Aki_TMTPro18x_K_F8 129.05 118.27 78951 70622 83871 91815 66755 61388 70168 76465 76980 104080 109250 132380 96938 95527 127140 102520 100370 146330 73084 64808 84546 90595 70677 64780 70867 77864 79424 104470 110260 131720 100800 100120 127160 105430 96606 138360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 409080000 19023 1637 17837 36074;36075 28897;28898 28898 1066 2 9606 Homo sapiens -0.0416415593858801 MSNYDTDLFVPYFEAIQK Unmodified 2180.0136 0.013607739 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 7 0.816 1 1 1 65.255 65.285 3 3.7696E-14 20017 20230619_1888_Aki_TMTPro18x_K_F8 163.41 147.82 124330 98812 128030 134790 77647 112690 118440 119100 116350 162480 172400 222390 177550 165090 202440 202370 190140 222570 114980 90763 129060 132870 85905 115710 117120 122470 121030 163560 174900 220930 182290 174060 204750 203900 182270 211060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 383820000 19024 1637 17837 36076;36077;36078 28899;28900 28900 2 9606 Homo sapiens -0.029198520759564417 MSPLSIVTALVDK Oxidation (M) 1388.7585 0.75850267 4713 Q9Y305-3;Q9Y305-2;Q9Y305;Q9Y305-4;C9J7L8;Q96EA2 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial yes no 0 1 0 3 0 1 65.04 65.074 3 0.036683 20513 20230619_1882_Aki_TMTPro18x_K_F3 45.28 29.339 16879 14814 14626 19707 15743 15478 15314 19093 17769 18965 22395 19390 21164 20079 18361 23632 24511 25679 15598 13599 15088 19439 16246 16059 15559 19249 18150 19180 22682 19712 21524 20872 19089 23788 23400 24364 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16732000 19025 4713 17838 36079 28901 28901 2874 1 9606 Homo sapiens 0.07967376037072427 MSPNETLFLESTNK Unmodified 1609.7658 0.76577289 2809 D3DPT8;Q9HB90;Q9NQL2 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D yes no 0 0 0 6 0 1 58.147 58.216 3 8.9731E-07 17378 20230619_1886_Aki_TMTPro18x_K_F6 127.36 117.7 54358 44840 50711 55027 51711 51322 59585 55774 61640 61568 58818 64982 70519 63654 67136 70619 69559 76726 50238 41136 51854 54696 53797 52303 59682 56849 62597 62018 61053 65756 71468 66068 68482 71189 66580 72784 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37440000 19026 2809 17839 36080 28902;28903 28903 2 9606 Homo sapiens -0.014719361531206232 MSQEEVNVFR Oxidation (M) 1253.571 0.57103625 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 1 0 3.5 0.5 1 1 43.16 43.215 2 0.00057712 11026 20230619_1882_Aki_TMTPro18x_K_F3 117.71 106.55 76896 55382 61609 86422 79216 82215 80331 78392 98496 87805 93644 89784 96145 83777 78042 92386 107980 109510 70933 50973 64266 84590 80942 83348 81468 80635 99101 88329 96366 90868 97232 87098 81406 93615 103030 103830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99637000 19027 1002 17840 36081;36082 28904 28904 564 1 9606 Homo sapiens -0.04560642447609098 MSQVAPSLSALIGEAVGAR Unmodified 1855.9826 0.98258238 2138 A8K9K6;O00567;A0PJ92;A0A494C128;H0YDU4;H0Y653 NOP56 Nucleolar protein 56 yes no 0 0 0 3.5 0.5 1 1 65.053 65.075 3 2.2623E-19 20438 20230619_1883_Aki_TMTPro18x_K_F4 170.38 140.05 14377 9139.1 11423 11469 10027 12009 11139 13980 12238 12439 12466 14239 19780 15086 11949 19242 16872 19555 13253 8395.4 11828 11403 10572 12144 11214 14096 12425 12706 13105 14413 19576 15762 12600 19263 16114 18560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53918000 19028 2138 17841 36083;36084 28905 28905 1 9606 Homo sapiens 0.08883039400416237 MSSEVVDSNPYSR Oxidation (M) 1485.6406 0.64057238 1730 E7EQ61;A0A804HJ86;Q9GZZ9;E7EWE1 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes no 0 1 0 3 0 1 39.086 39.141 2 0.0019058 9216 20230619_1882_Aki_TMTPro18x_K_F3 89.266 78.437 19497 12158 16831 19662 19593 19249 19219 19076 21397 19942 27038 23970 24691 20987 25106 28070 28049 29029 17981 11203 17374 19222 20112 19489 19473 19531 21885 20233 27354 24081 25295 22121 25702 28137 26815 27558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30801000 19029 1730 17842 36085 28906 28906 1134 1 9606 Homo sapiens -0.08282228289522209 MSSEVVDSNPYSR Unmodified 1469.6457 0.64565776 1730 E7EQ61;A0A804HJ86;Q9GZZ9;E7EWE1 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes no 0 0 0 4 0 1 44.877 44.921 2 4.0295999999999996E-28 11678 20230619_1883_Aki_TMTPro18x_K_F4 263.3 247.71 56473 41073 44277 48364 41150 53452 44540 45139 53464 60085 65926 68227 67373 55365 63415 78570 72828 83378 52090 37684 45972 48310 43193 53465 45016 47096 54484 60162 67132 68479 68519 58775 65163 78796 69664 79103 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41428000 19030 1730 17842 36086 28907 28907 1 9606 Homo sapiens -0.0703792442689064 MSSFGDFVALSDVCDVPTAK Oxidation (M) 2160.9708 0.97075665 3534;2560 B4DP06;V9HWH7;P31939;B2R7P8;P31939-2 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 1 0 6 0 1 62.853 62.901 3 1.5945E-11 19428 20230619_1886_Aki_TMTPro18x_K_F6 132.9 123.11 43064 36440 39570 44571 42931 44116 45933 39723 45710 45411 53551 53417 48494 48059 55557 61786 54748 60651 39801 33426 40565 44333 44379 44560 46131 41073 46882 45839 54375 53717 50034 50437 56365 61787 52432 57597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162020000 19031 2560;3534 17843 36087 28908 28908 1554 1 9606 Homo sapiens -0.0632899019569777 MSSFGDFVALSDVCDVPTAK Unmodified 2144.9758 0.97584202 3534;2560 B4DP06;V9HWH7;P31939;B2R7P8;P31939-2 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 0 6.5 0.5 1 1 63.888 63.926 3 1.6887E-11 19637 20230619_1887_Aki_TMTPro18x_K_F7 135.27 125.99 112440 105790 123440 85926 54689 88158 98495 86410 86436 124010 107650 134210 123440 128580 133570 118390 129610 155750 104160 96678 123240 88646 63562 88989 96508 89444 89750 123570 110400 135420 126110 132240 135350 121290 124230 147440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1221300000 19032 2560;3534 17843 36088;36089 28909 28909 1 9606 Homo sapiens -0.050846863331116765 MSSFKEEK Unmodified 984.45863 0.45863226 3876 Q14151;A0PJ47 SAFB2 Scaffold attachment factor B2 yes no 0 0 1 7.5 0.5 1 1 43.492 43.537 3 0.052485 10720 20230619_1887_Aki_TMTPro18x_K_F7 58.699 17.251 136820 92067 146910 144630 184210 181260 184740 178130 184170 167300 185780 140730 159470 118790 166730 114680 142430 104160 126450 84770 148940 142180 188150 180410 186200 181860 187660 168850 189110 143390 163760 123130 167770 114930 136250 99182 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51123000 19033 3876 17844 36090;36091 28910 28910 1 9606 Homo sapiens -0.034218714537814776 MSSNSASAANGNDSK Oxidation (M) 1455.5896 0.58959944 1980 A6NLN1;K7ES59 PTBP1 yes no 0 1 0 5 0.816 1 1 1 62.2 62.235 3 0.04957 19282 20230619_1883_Aki_TMTPro18x_K_F4 40.941 29.328 319900 298000 371560 349930 393750 323590 372630 381090 340170 305820 368410 346740 349090 316470 386580 387990 356390 404440 296450 273150 373190 349020 405480 330890 376180 383400 349420 314270 375850 349460 358750 331150 390810 389670 341620 383790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 892240000 19034 1980 17845 36092;36093;36094 28911 28911 1252 1 9606 Homo sapiens -0.11997177334365006 MSSPEDDSDTK Oxidation (M) 1226.4609 0.46087668 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z1C7;B7Z2F6;B7Z959 SAFB Scaffold attachment factor B1 yes no 0 1 0 1 0 1 33.763 33.763 3 0.014973 7504 20230619_1880_Aki_TMTPro18x_K_F1 61.194 45.304 12726 8845.2 13085 13288 16274 20990 15191 16645 19123 13803 19172 22220 18624 15893 21295 16486 21867 18828 11759 8138.4 13316 13146 16652 20524 15504 17223 19237 14367 19672 21953 19153 16628 21610 16707 20896 17870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15975000 19035 2020 17846 36095 28912 28912 1268 1 9606 Homo sapiens -0.14329532297324477 MSSPLADAK Oxidation (M) 934.44298 0.44298219 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 1 0 5 0 1 41.046 41.134 2 0.01866 9997 20230619_1885_Aki_TMTPro18x_K_F5 95.608 60.359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19036 68 17847 36096 28913 28913 32 1 9606 Homo sapiens -0.026861579708338468 MSSSDTPLGTVALLQEK Oxidation (M) 1791.8924 0.89242997 3252 O43290;B4DDH9 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 1 0 7 0 1 60.778 60.82 3 7.1216E-07 18137 20230619_1887_Aki_TMTPro18x_K_F7 109.48 91.113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19037 3252 17848 36097 28914 28914 1921 1 9606 Homo sapiens 0.02815945281349741 MSSSFDR Oxidation (M) 844.33852 0.33851712 923 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;Q9Y655;A0A087WUT0;A0A024R5Q6;A0A0C4DGV1;H0YN19;Q9P2K5-3;H0YKS1 MYEF2 Myelin expression factor 2 yes no 0 1 0 2.5 0.5 1 1 30.084 30.165 2 0.051418 5644 20230619_1882_Aki_TMTPro18x_K_F3 78.324 64.652 36199 25045 38574 34524 30436 27377 36266 41749 37980 30324 45355 41096 39351 34726 36278 29515 47126 43675 33458 23021 38830 34019 32354 28563 36324 41348 38827 31573 45893 41033 40219 35765 37501 30561 44961 41345 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30200000 19038 923 17849 36098;36099 28915 28915 528 1 9606 Homo sapiens -0.08987859727540126 MSSSFDR Unmodified 828.3436 0.3436025 923 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;Q9Y655;A0A087WUT0;A0A024R5Q6;A0A0C4DGV1;H0YN19;Q9P2K5-3;H0YKS1 MYEF2 Myelin expression factor 2 yes no 0 0 0 4 0 1 37.387 37.431 2 0.011243 8526 20230619_1883_Aki_TMTPro18x_K_F4 116.9 100.75 69775 48183 66214 69810 63410 58696 67096 64548 83805 68682 82226 83380 83083 70980 68700 65214 93693 86751 64429 44315 67517 68570 66129 60349 67969 65692 84304 69662 84463 83528 84108 73347 71463 66852 89355 82194 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56557000 19039 923 17849 36100 28916 28916 1 9606 Homo sapiens -0.07743555864931295 MSSTFIGNSTAIQELFK Oxidation (M) 1888.9241 0.92406445 983 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2 TUBB3 Tubulin beta-3 chain yes no 0 1 0 2.5 0.5 1 1 63.242 63.261 3 1.6561E-18 20078 20230619_1881_Aki_TMTPro18x_K_F2 177.04 150.01 314330 204070 305670 365860 261160 340910 279410 304840 351470 374160 428220 460390 431260 423140 398740 467570 433760 553210 290210 188260 310930 355490 275850 345440 283180 315900 357090 377060 436060 462190 438860 439890 408410 473730 415510 524090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 656150000 19040 983 17850 36101;36102 28917;28918 28917 555 2 9606 Homo sapiens 0.015159380352997687 MSSTFIGNSTAIQELFK Unmodified 1872.9291 0.92914983 983 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2 TUBB3 Tubulin beta-3 chain yes no 0 0 0 3 0 1 63.464 63.495 3 3.1486E-09 19886 20230619_1882_Aki_TMTPro18x_K_F3 129.05 0 55856 47203 54424 63313 59362 82796 70208 68448 81914 75937 85598 95471 99892 85740 89003 85964 85015 109420 51648 43340 55565 62834 61709 81854 70512 71123 82918 76968 88346 95668 100970 88799 90465 87709 81549 103590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 187310000 19041 983 17850 36103 28919;28920 28919 2 9606 Homo sapiens 0.02760241897931337 MSSTFIGNSTAIQELFKR Oxidation (M) 2045.0252 0.025175478 983 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2 TUBB3 Tubulin beta-3 chain yes no 0 1 1 4.5 0.5 1 1 61.181 61.184 3 4.8765999999999997E-23 18820 20230619_1883_Aki_TMTPro18x_K_F4 212.72 156.12 349070 317890 319880 297160 312370 190710 255640 277270 213840 322420 308110 206000 253250 200940 279130 271480 279040 197120 322780 290840 326810 300870 322260 203650 260180 278490 224540 319530 308680 214530 261280 211240 283310 267580 266420 188310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53954000 19042 983 17851 36104;36105 28921;28922;28923 28922 555 3 9606 Homo sapiens 0.0444638973799556 MSSTIFSTGGK Unmodified 1114.5329 0.53285983 3839 Q13177;A8K5M4 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase yes no 0 0 0 3 0 1 52.217 52.282 3 5.9387E-05 15167 20230619_1882_Aki_TMTPro18x_K_F3 108.7 81.911 142610 119580 132260 144050 128210 158500 147110 133630 184180 140210 142330 155880 174500 145350 147920 197990 188390 190340 131810 109670 135240 143640 134210 158580 148330 138490 183770 141960 149500 157260 175870 153060 153390 197520 179870 180860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115720000 19043 3839 17852 36106 28924 28924 1 9606 Homo sapiens -0.019825283622594725 MSSYAFFVQTCR Oxidation (M) 1511.6537 0.65372002 772;4068;3509 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;B2RPK0;Q75MM1;Q9NYD7;Q5U071;D6R9A6;P26583 HMGB1;HMGB1P1;WUGSC:H_NH0244E06.1;HMG1;HMGB2 High mobility group protein B1;Putative high mobility group protein B1-like 1;High mobility group protein B2 no no 0 1 0 4.25 0.829 1 1 2 53.691 53.744 2;3 6.1757E-07 15231 20230619_1885_Aki_TMTPro18x_K_F5 161.51 138.19 638280 547540 614350 613260 651410 708990 646030 698480 865530 321770 310640 270030 261710 256000 529040 361020 352630 301890 590190 501810 626560 615460 673910 709500 658310 704090 845460 344820 342960 276640 281770 269890 522580 358350 338750 287550 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 849730000 19044 772;4068;3509 17853 36107;36108;36109;36110 28925;28926;28927;28928 28927 470 4 9606 Homo sapiens -0.08164068711130312 MSSYAFFVQTCR Unmodified 1495.6588 0.6588054 772;4068;3509 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;B2RPK0;Q75MM1;Q9NYD7;Q5U071;D6R9A6;P26583 HMGB1;HMGB1P1;WUGSC:H_NH0244E06.1;HMG1;HMGB2 High mobility group protein B1;Putative high mobility group protein B1-like 1;High mobility group protein B2 no no 0 0 0 6 0.816 1 1 1 58.891 58.948 3 3.5954E-24 17438 20230619_1885_Aki_TMTPro18x_K_F5 205.07 20.626 180220 143980 154260 156630 144960 195910 171810 174400 230630 96698 75928 78312 88823 75847 138280 97147 93829 82128 166420 131950 158780 157710 152490 194550 173400 177560 225050 101620 85886 80321 92642 79441 137060 96583 90124 78208 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1262100000 19045 772;4068;3509 17853 36111;36112;36113 28929;28930;28931 28930 3 9606 Homo sapiens -0.06919764848498744 MSSYAFFVQTCREEHK Unmodified 2018.8979 0.89786647 772;4068;3509 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;B2RPK0;Q9NYD7;Q5U071;D6R9A6;P26583 HMGB1;HMGB1P1;HMG1;HMGB2 High mobility group protein B1;Putative high mobility group protein B1-like 1;High mobility group protein B2 no no 0 0 1 2 0 1 50.531 50.583 4 1.3978E-05 14688 20230619_1881_Aki_TMTPro18x_K_F2 110.84 17.334 119800 148080 138880 109450 122540 121830 144940 136280 127660 99794 102360 73640 104540 82534 142350 108220 104940 82693 111280 135140 139060 114150 128940 122790 144340 137240 129950 102040 106240 76432 108350 86220 141830 107030 100620 78894 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138500000 19046 772;4068;3509 17854 36114 28932 28932 1 9606 Homo sapiens -0.07082654407827249 MSTEEIIQR Oxidation (M) 1121.5387 0.53867349 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PM69;E9PKD5;E9PMD8;E9PN50;E9PLG2 PSMC3 26S protease regulatory subunit 6A yes no 0 1 0 2.5 0.5 1 1 38.066 38.125 2 0.0024523 8954 20230619_1881_Aki_TMTPro18x_K_F2 99.136 65.047 169670 135500 142730 178480 201980 222970 199110 198940 239340 217460 235150 234560 249650 203550 204760 254860 250650 237230 156660 124410 148350 177200 205150 221510 202100 205370 241370 219370 242040 236370 252180 213700 211810 254170 239280 225550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253340000 19047 4761 17855 36115;36116 28933;28934 28933 2905 2 9606 Homo sapiens -0.01723429850608227 MSTLLINQPQYAWLK Unmodified 1804.9546 0.95457672 1415 P49419-2;A0A384MDZ8 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 6 0 1 63.709 63.755 3 0.027559 19819 20230619_1886_Aki_TMTPro18x_K_F6 49.216 29.11 42632 40489 54857 42936 43755 55207 51399 53297 63431 50454 43356 47324 56682 48982 61447 53876 50857 50430 39554 37076 54478 43369 46569 54845 51772 54482 63130 51083 46067 48235 57656 50727 61771 53902 48759 47937 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47957000 19048 1415 17856 36117 28935 28935 1 9606 Homo sapiens 0.08429761211004916 MSTMTPK Oxidation (M) 810.36156 0.36156075 2561 B4DP27;Q6FHT8;Q15363;F5GX39;E7EQ72 RNP24;TMED2 Transmembrane emp24 domain-containing protein 2 yes no 0 1 0 8 0 1 36.373 36.359 2 0.0052576 8004 20230619_1888_Aki_TMTPro18x_K_F8 129.39 80.632 31793 16820 32797 32163 51051 56552 43656 51118 54037 27038 39347 38690 41835 34699 46184 21466 42886 35750 29341 15549 33508 31513 51397 55164 44763 51909 53784 29019 41182 38614 42817 35244 46560 22672 41016 33831 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17386000 19049 2561 17857 36118 28936 28936 1558 1 9606 Homo sapiens -0.05120556934423348 MSTPIEVLCK Unmodified 1176.5883 0.58826622 2398;544 Q5U045;Q53EZ1;B3KRV2;P49674;H0Y645;B0QY35;B0QY34;A0A669KBC0;H7C3J2;H7C0Y5;B4E0G1;A0A024R8X3;H7BYT1;P48730-2;P48730;B4DIJ9;Q59FJ7 CSNK1E;CSNK1D Casein kinase I isoform epsilon;Casein kinase I isoform delta no no 0 0 0 1 0 1 57.669 57.669 3 0.0016454 17534 20230619_1880_Aki_TMTPro18x_K_F1 88.392 66.996 25586 20633 21664 26385 20132 29043 24512 25895 32134 27721 27049 28418 34015 27207 20980 37877 35673 30033 23626 18938 22348 26198 21227 29074 24697 26720 32098 27955 28287 28795 33883 28663 22465 37402 33951 28630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50117000 19050 2398;544 17858 36119 28937 28937 1 9606 Homo sapiens 0.007035618338477434 MSTSPEAFLALR Unmodified 1321.67 0.67002202 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 1.5 0.5 1 1 60.598 60.604 2 6.4978E-06 18906 20230619_1881_Aki_TMTPro18x_K_F2 142.92 109.73 283030 247230 279400 287170 249350 304130 303550 300830 330070 352280 336500 328590 369560 311780 332820 384620 347100 379570 261790 226640 283760 287030 263050 306160 303820 308930 335200 352520 346360 334160 374350 326070 340170 384910 332190 360450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 188340000 19051 3758 17859 36120;36121 28938;28939 28939 2 9606 Homo sapiens 0.02205380517307276 MSTSPEAFLALR Oxidation (M) 1337.6649 0.66493664 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 7.5 0.5 1 1 55.821 55.883 2 8.3867E-06 16077 20230619_1888_Aki_TMTPro18x_K_F8 142.94 126.98 119520 112850 120980 145610 134910 134040 142160 132580 134640 140090 152240 140840 147350 113230 147610 162170 139220 148260 110630 103530 123120 144170 139050 136430 142700 135830 138330 141160 155120 142110 150440 120330 149720 161350 133350 140930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148190000 19052 3758 17859 36122;36123 28940 28940 2442 1 9606 Homo sapiens 0.009610766546757077 MSVDAVEIETLRK Unmodified 1489.781 0.78102903 2144;1327 A0A1W6S962;X5D7Q9;P78347-5;A0A0A0VEB4;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52 GTF2I;GTF2I-RARA General transcription factor II-I no no 0 0 1 6.5 0.5 1 1 54.044 54.116 3 2.6400999999999997E-21 15640 20230619_1886_Aki_TMTPro18x_K_F6 225.72 204.77 464620 398540 416130 448620 393880 462290 449550 454270 478890 496210 479200 488140 542850 456520 476490 581670 557840 569370 429380 365260 426630 449260 412700 466310 451100 465790 486490 498960 494510 494990 548920 478620 490770 581500 533030 540880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 763310000 19053 1327;2144 17860 36124;36125 28941;28942 28941 2 9606 Homo sapiens 0.05572975434733962 MSVIEEGDCKR Unmodified 1322.5959 0.59587079 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 1 4 0 1 42.592 42.636 3 0.00069267 10690 20230619_1883_Aki_TMTPro18x_K_F4 94.767 76.5 108710 101470 107020 110010 141030 159620 137840 124380 219620 95818 133400 108530 116650 89097 141580 107170 105800 113400 100590 92943 109400 111060 143900 156840 141540 128760 215170 99062 140040 109090 120690 93552 141370 107870 101630 107610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69425000 19054 3432 17861 36126 28943 28943 1 9606 Homo sapiens -0.05252330636562874 MSVIWDK Unmodified 877.43677 0.4367746 1284;1217;4185 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;H0YBT4;A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q8NAN9;Q86U75 DPYSL3;DPYSL2 Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 2 no no 0 0 0 4.5 3.5 1 1 57.405 57.431 2;3 0.0073597 16748 20230619_1888_Aki_TMTPro18x_K_F8 91.626 38.072 543250 472730 511100 529810 384280 511980 526060 537840 555680 675370 607910 648120 688300 827680 302330 923880 339340 688590 502280 433220 520180 530370 413720 519620 523410 551350 567170 674410 624470 665620 683100 851450 319950 911960 326740 655240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1251500000 19055 1217;1284;4185 17862 36127;36128 28944;28945 28945 2 9606 Homo sapiens -0.006846314116955909 MSVIWDK Oxidation (M) 893.43169 0.43168922 1284;1217;4185 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;H0YBT4;A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q8NAN9;Q86U75 DPYSL3;DPYSL2 Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 2 no no 0 1 0 7 0.707 1 2 1 50.452 50.53 2;3 0.026937 13815 20230619_1887_Aki_TMTPro18x_K_F7 67.032 31.152 819300 707280 803110 814270 830160 821500 933080 894080 946080 904670 1008300 928640 951680 799220 973480 956780 912000 952430 757730 648350 817590 814030 861970 832260 935350 908820 965340 914330 1028800 937680 973870 837070 986070 958840 873470 904520 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 973610000 19056 1217;1284;4185 17862 36129;36130;36131;36132 28946;28947;28948 28947 756 3 9606 Homo sapiens -0.019289352743157906 MSVQPTVSLGGFEITPPVVLR Oxidation (M) 2242.2031 0.20313984 1089;2882 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;Q9BTI9;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;Q9NX34;E5RI98;A0A7I2V5J8 NPM1 Nucleophosmin no no 0 1 0 3.5 0.5 1 1 63.813 63.833 3 8.1293E-23 19999 20230619_1882_Aki_TMTPro18x_K_F3 179.03 166.97 86524 69518 55036 95757 85424 64651 88379 79580 84447 96789 86873 88032 84954 90655 86529 100620 88430 101690 79756 63860 59200 94073 86220 68156 88763 80805 86448 96603 88970 89844 86966 93885 88152 100980 84683 96525 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 294390000 19057 1089;2882 17863 36133;36134 28949;28950 28949 658 2 9606 Homo sapiens 0.13172639937192798 MSVQPTVSLGGFEITPPVVLR Unmodified 2226.2082 0.20822522 1089;2882 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;Q9BTI9;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;Q9NX34;E5RI98;A0A7I2V5J8 NPM1 Nucleophosmin no no 0 0 0 3.67 0.471 1 2 65.234 65.252 3 1.45E-45 20318 20230619_1882_Aki_TMTPro18x_K_F3 260.24 239.5 47138 39414 46892 49079 40106 48479 47702 57967 53150 64831 63157 64150 68031 59108 58910 75359 69539 65891 43591 36162 47569 48642 42435 49274 47877 58711 54296 65091 64543 65000 68858 61978 60741 74893 66407 62697 3 3 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 979290000 19058 1089;2882 17863 36135;36136;36137 28951;28952;28953 28951 3 9606 Homo sapiens 0.14416943799824367 MTALAQDFAVGLGPR Unmodified 1545.7973 0.79734779 337 A0A024R5F4;P50416;B2RAQ8;P50416-2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 0 2.5 0.5 1 1 63.054 63.074 3 1.0848E-07 19957 20230619_1881_Aki_TMTPro18x_K_F2 129.04 111.21 38820 31792 35531 40792 37923 48031 48153 51977 50459 42287 42115 40788 45643 36936 42163 44579 41933 43480 35870 29180 36452 40549 39525 48082 48026 52545 50920 43212 43755 41365 46294 38643 42936 44610 40134 41303 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120990000 19059 337 17864 36138;36139 28954 28954 1 9606 Homo sapiens 0.04628101391472228 MTDEEIMEK Oxidation (M) 1140.4679 0.46787631 3839 Q13177;A8K5M4 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase yes no 0 1 0 1 0 1 45.03 45.03 2 0.00017185 12314 20230619_1880_Aki_TMTPro18x_K_F1 143.37 108.57 42139 37411 38138 45897 42511 51196 44533 42961 51217 50960 64444 58203 55636 48300 43127 61554 62577 67250 38955 34312 39193 45707 43915 51172 45000 44687 52300 51300 65043 58464 56485 50851 45254 61901 59718 63797 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34848000 19060 3839 17865 36140 28955 28955 2513 1 9606 Homo sapiens -0.0967389095044382 MTDFDRFK Unmodified 1058.4855 0.48551571 1898 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 RPL14 60S ribosomal protein L14 yes no 0 0 1 7.5 0.5 1 1 49.587 49.665 3 0.0040618 13387 20230619_1888_Aki_TMTPro18x_K_F8 103.56 85.16 390020 463990 372250 290590 455920 352940 369780 431030 376480 207270 158670 123850 181440 118280 226690 211050 199180 105830 361520 423100 380130 309550 463440 354970 378210 428620 374280 219030 174010 129730 186470 127170 228080 204790 190190 101980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 300280000 19061 1898 17866 36141;36142 28956 28956 1 9606 Homo sapiens -0.04138762842603683 MTDIMTEGITIVEDINK Unmodified 1921.9377 0.9376656 1274 P61764-2;P61764;A0A1B0GVQ5;A0A1B0GWF2;A0A1B0GTP9;A0A0D9SG72;A0A2R8Y5D4;B7Z2V7;A0A994J7L2;A0A1B0GW76;A0A0D9SEP9;A0A0D9SFW6;A0A0D9SFQ7;A0A0D9SEH5 STXBP1 Syntaxin-binding protein 1 yes no 0 0 0 5.5 0.5 1 1 66.713 66.755 3 1.2442E-07 20877 20230619_1885_Aki_TMTPro18x_K_F5 120.66 108.5 8063.8 6181.3 7325 10020 6346.2 5635.2 5821.6 5790.1 6270.6 8325 8114.9 11600 8963.8 7873.7 10526 10345 9676.2 11927 7447.7 5690.5 7499.4 9737.2 6646.9 6036.5 5921.7 5984.7 6448.6 8370 8305.2 11487 9196.1 8373.7 10629 10444 9281.9 11304 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12571000 19062 1274 17867 36143;36144 28957 28957 1 9606 Homo sapiens 0.013574277522593547 MTDLTSSIPK Unmodified 1091.5533 0.55326092 4583 Q9NR50;Q9NR50-3;Q9NR50-2;A0A0D9SEN0 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes no 0 0 0 8 0 1 54.01 54.081 2 0.0016319 15317 20230619_1888_Aki_TMTPro18x_K_F8 120.87 63.691 49799 42670 50923 54988 48678 63906 60246 52590 68287 65634 61579 69967 77129 60468 50190 77240 81648 78321 46070 39159 51646 54621 51130 63657 60303 54884 68867 65786 64202 70491 76946 63600 53392 77325 77793 74390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28951000 19063 4583 17868 36145 28958 28958 1 9606 Homo sapiens 0.01114642297534374 MTDQEAIQDLWQWR Unmodified 1818.8359 0.83591814 1089;2882 P06748;A0A7I2V5S2;A0A0S2Z491;A0A7I2YQC0;P06748-2;A0A0S2Z4G7;Q9BTI9;A0A7I2V4G8;E5RI98;A0A7I2V5J8 NPM1 Nucleophosmin no no 0 0 0 5.29 1.03 2 2 2 1 63.843 63.876 2;3 4.8756E-70 19858 20230619_1886_Aki_TMTPro18x_K_F6 280.91 249.91 1430800 1383900 1609400 1404800 1186000 1599700 1348400 1472000 1508800 1824900 1604200 1826400 2015900 1523800 1738500 2099900 1915000 1905300 1325900 1266700 1612500 1420800 1271800 1600000 1356700 1521600 1534200 1824700 1661000 1843300 2030000 1612900 1784400 2089000 1830500 1811800 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 8119999999.999999 19064 1089;2882 17869 36146;36147;36148;36149;36150;36151;36152 28959;28960;28961;28962;28963 28961 5 9606 Homo sapiens -0.040746377646655674 MTDQEAIQDLWQWR Oxidation (M) 1834.8308 0.83083277 1089;2882 P06748;A0A7I2V5S2;A0A0S2Z491;A0A7I2YQC0;P06748-2;A0A0S2Z4G7;Q9BTI9;A0A7I2V4G8;E5RI98;A0A7I2V5J8 NPM1 Nucleophosmin no no 0 1 0 4.5 1.12 1 1 1 1 62.886 62.919 3 4.6082E-07 19346 20230619_1885_Aki_TMTPro18x_K_F5 133.54 112.68 49898 42146 57683 47667 40628 58842 51821 47318 62182 60753 59294 51730 55796 46894 58055 64550 64340 79142 46208 38631 57646 47860 43954 58367 51944 49499 62643 60427 60776 52793 57171 49511 59384 65365 61602 74961 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5533800000 19065 1089;2882 17869 36153;36154;36155;36156 28964 28964 659 1 9606 Homo sapiens -0.05318941627297136 MTDSFTEQADQVTAEVGK Oxidation (M) 1971.8732 0.87315109 1243 A0A140VKA9;P09417;B7Z415;D6RGG7;H0Y8F7 QDPR Dihydropteridine reductase yes no 0 1 0 3 0 1 55.936 55.977 3 3.0187E-07 16752 20230619_1882_Aki_TMTPro18x_K_F3 117.26 106.92 28222 25848 29897 35434 32835 32351 34320 32712 34049 37790 40539 38380 44070 31284 39176 49777 43357 46236 26128 23731 30305 34944 33868 32964 34517 33546 34985 37924 41429 38731 44592 33506 40215 49487 41464 43942 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 259690000 19066 1243 17870 36157 28965 28965 788 1 9606 Homo sapiens -0.07391055800258073 MTDSFTEQADQVTAEVGK Unmodified 1955.8782 0.87823647 1243 A0A140VKA9;P09417;B7Z415;D6RGG7;H0Y8F7 QDPR Dihydropteridine reductase yes no 0 0 0 3.5 1.12 1 1 1 1 59.903 59.927 3 1.68E-14 18311 20230619_1883_Aki_TMTPro18x_K_F4 167.05 151.66 53393 36120 43397 55030 39319 48079 45197 51140 45278 60475 62160 61998 69518 60305 63474 69308 67477 73932 49241 33243 44925 53896 41378 49184 45279 52283 46864 60629 63309 62825 70430 62744 64906 69746 64567 70149 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191760000 19067 1243 17870 36158;36159;36160;36161 28966 28966 1 9606 Homo sapiens -0.061467519376265045 MTDVFEGSIIR Unmodified 1266.6278 0.62782285 3579 P42285;A8K6I4;B4E3M6;H0YAC4 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 0 0 6 0.816 1 1 1 59.753 59.806 2 5.8422E-12 18046 20230619_1886_Aki_TMTPro18x_K_F6 204.28 157.2 227580 209360 213990 205280 188200 217220 215150 211740 254600 189960 151860 139650 192330 140960 168290 205090 181650 175140 210500 191600 218070 207990 198410 218730 216590 216120 252980 191760 162350 144230 193780 148880 172480 203270 173620 166690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137470000 19068 3579 17871 36162;36163;36164 28967;28968 28967 2 9606 Homo sapiens 0.005174051089170462 MTEDALR Oxidation (M) 850.38547 0.38546731 1158 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RR34;A0A0U1RRK3;A0A1B0GVS4 GATAD2B Transcriptional repressor p66-beta yes no 0 1 0 1 0 1 32.484 32.484 2 0.064247 6948 20230619_1880_Aki_TMTPro18x_K_F1 72.138 42.8 14038 12201 15640 18419 21258 22001 20714 18998 23506 19947 25714 28448 24234 22976 22604 18225 29226 24903 12998 11217 15856 18122 21606 21903 20997 19652 23859 20375 26231 28286 24723 23621 23351 18784 27870 23598 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12119000 19069 1158 17872 36165 28969 28969 708 1 9606 Homo sapiens -0.045710001764064145 MTEIQTPENTPR Oxidation (M) 1431.6664 0.6663932 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;B3KVJ5 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 1 0 3 0 1 37.499 37.553 2 0.0615 8593 20230619_1882_Aki_TMTPro18x_K_F3 77.379 67.147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19070 4593 17873 36166 28970 28970 2820 1 9606 Homo sapiens -0.03217334047235454 MTENSTSAPAAKPK Acetyl (Protein N-term);Oxidation (M) 1489.7083 0.70825802 3399 P07305 H1F0 Histone H1.0;Histone H1.0, N-terminally processed no no 1 1 1 4 0 1 36.915 36.959 3 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13455000 19071 3399 17874 36167 0 9606 Homo sapiens -0.017007783587132508 MTESWFSSLSR Unmodified 1329.6023 0.60233638 2051 A8K4T6;Q16401-2;Q16401;Q4VXH0 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes no 0 0 0 2 0 1 61.079 61.09 2 0.00043111 19071 20230619_1881_Aki_TMTPro18x_K_F2 141.91 117.79 64208 42665 51693 57608 52641 69997 57389 58727 79606 61573 64442 60891 69347 61859 68180 61318 63427 75816 59206 39215 53614 57089 54901 69538 58270 60845 79184 62119 67026 61886 70581 63768 69053 62465 60818 71811 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42979000 19072 2051 17875 36168 28971 28971 1 9606 Homo sapiens -0.049280694134949954 MTEWETAAPAVAETPDIK Acetyl (Protein N-term) 2000.9401 0.94010844 300 M0R0F0;A0A024R4Q8;M0R0R2;P46782;Q53G25;M0QZN2 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 1 0 0 2.5 1.12 1 1 1 1 64.061 64.073 3 1.5077E-18 20424 20230619_1881_Aki_TMTPro18x_K_F2 88.992 78.796 58247 59751 73100 71331 30481 42991 48251 52938 55603 105360 89896 86132 80682 66064 69425 93685 83427 76397 54058 54761 72364 70751 35553 45865 47968 54810 57793 102970 90168 87576 82077 70271 71703 92665 79638 72771 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 161670000 19073 300 17876 36169;36170;36171;36172 28972;28973 28972 2 9606 Homo sapiens -0.020324005184420457 MTFSEHPYNNLR Oxidation (M) 1523.6827 0.68271197 1016 A0A0D9SEN2;P21127-3;A0A0D9SER5;A0A0D9SEI3;B4E3D9;P21127-2;P21127-8;P21127;Q9UQ88-3;Q9UQ88-4;Q9UQ88-2;P21127-9;P21127-6;Q5QPR3;Q9UQ88;Q5QPR4;P21127-12;A4VCI5;Q6P5Y5;P21127-4;P21127-10;P21127-5;Q96CA8;Q4VBY6;Q9UQ88-5;Q9UQ88-10;Q9UQ88-8 CDK11B;CDK11A;CDC2L1;CDC2L2 Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A yes no 0 1 0 7 0 1 38.453 38.516 3 0.035662 8663 20230619_1887_Aki_TMTPro18x_K_F7 53.388 38.697 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19074 1016 17877 36173 28974 28974 575 1 9606 Homo sapiens -0.05818208090454391 MTFTSNK Unmodified 827.38474 0.38473903 3205 O00154-4;O00154-6;O00154-7;O00154;O00154-5;B4DUX0;K7EKP8;Q6ZUV0 ACOT7;ACOT7L Cytosolic acyl coenzyme A thioester hydrolase;Putative cytosolic acyl coenzyme A thioester hydrolase-like yes no 0 0 0 1.5 0.5 1 1 44.819 44.86 2 0.0078229 12102 20230619_1881_Aki_TMTPro18x_K_F2 129.68 90.464 311660 216200 292520 281690 265340 338460 311720 287520 406190 159540 150080 140800 139880 114650 203860 138740 174580 121020 287760 198610 298320 279830 279570 336590 314340 293940 397410 168060 165670 143000 146220 120420 204170 138280 166950 115320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204930000 19075 3205 17878 36174;36175 28975 28975 1 9606 Homo sapiens -0.03585794825460198 MTFTSNK Oxidation (M) 843.37965 0.37965365 3205 O00154-4;O00154-6;O00154-7;O00154;O00154-5;B4DUX0;K7EKP8;Q6ZUV0 ACOT7;ACOT7L Cytosolic acyl coenzyme A thioester hydrolase;Putative cytosolic acyl coenzyme A thioester hydrolase-like yes no 0 1 0 8 0 1 38.261 38.247 2 0.017373 8775 20230619_1888_Aki_TMTPro18x_K_F8 101.41 64.437 123520 81855 111470 112690 130450 129400 116460 125590 171330 39806 42905 31767 35806 31239 77911 25833 48508 24636 113990 75253 114490 111480 133640 129480 119870 126260 165890 44838 49756 32685 38818 31959 76560 26159 46531 23500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41455000 19076 3205 17878 36176 28976 28976 1885 1 9606 Homo sapiens -0.04830098688069029 MTGESECLNPSTQSR Unmodified 1695.7192 0.71923341 4500 Q9H2G2;Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase yes no 0 0 0 3 0 1 40.31 40.367 3 8.5776E-06 9750 20230619_1882_Aki_TMTPro18x_K_F3 115.1 105.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19077 4500 17879 36177 28977 28977 1 9606 Homo sapiens -0.10079744046743144 MTGLVDEAIDTK Unmodified 1291.633 0.63296781 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9;B4DKC9 VCL;HEL114 Vinculin yes no 0 0 0 3.5 0.5 1 1 59.832 59.847 3 0.024887 18376 20230619_1882_Aki_TMTPro18x_K_F3 56.122 42.217 24035 25310 23374 32427 28128 37216 31258 36654 40079 32224 34927 34831 38978 34624 36090 44272 38385 43239 22260 23210 23938 32209 28988 37233 31609 37350 40103 32901 36255 35268 39531 36224 36924 44251 36738 41062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193060000 19078 51 17880 36178;36179 28978 28978 1 9606 Homo sapiens -0.0011833581916107505 MTGSEFDFEEMKR Oxidation (M) 1621.6752 0.67524333 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q8TB95;B3KVE3 GDI2 Rab GDP dissociation inhibitor beta yes no 0 1 1 4 0 1 49.931 49.966 3 0.051221 13965 20230619_1883_Aki_TMTPro18x_K_F4 46.3 22.501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19079 2533 17881 36180 28979 28979 1541;1542 1 9606 Homo sapiens -0.1107272847305012 MTGTLETQFTCPFCNHEK Oxidation (M) 2215.9337 0.93365963 443 K7EN05;K7EPC8;A0A024R7E8;K7EQ44;K7EMV4;P60002 ELOF1 Transcription elongation factor 1 homolog yes no 0 1 0 7 0 1 51.132 51.21 3 0.0019373 14145 20230619_1887_Aki_TMTPro18x_K_F7 69.935 61.003 26182 62880 31581 29180 30930 41959 32894 31730 28316 29558 33089 34563 29807 25224 43557 34325 47854 36849 24544 57186 31618 32520 32261 41318 32928 33064 29301 30136 33627 34550 31187 26809 44230 34516 45669 35013 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31239000 19080 443 17882 36181 28980 28980 273 1 9606 Homo sapiens -0.12566985013108933 MTGTLETQFTCPFCNHEK Unmodified 2199.9387 0.93874501 443 K7EN05;K7EPC8;A0A024R7E8;K7EQ44;K7EMV4;P60002 ELOF1 Transcription elongation factor 1 homolog yes no 0 0 0 7.5 0.5 1 1 55.121 55.185 3 6.5448E-07 15838 20230619_1887_Aki_TMTPro18x_K_F7 114.52 99.429 19461 17710 21687 24803 20474 21874 23311 22916 23524 33035 28648 33855 34404 28300 27552 41026 35148 40970 18025 16265 21846 24420 21421 22366 23357 23616 24214 32846 29436 34133 34605 30054 28633 40974 33597 38893 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165930000 19081 443 17882 36182;36183 28981 28981 1 9606 Homo sapiens -0.1132268115052284 MTHNLLLNYGLYR Oxidation (M) 1622.8239 0.8238969 4305;2659 Q6IT96;B5BU61;Q13547;Q5TEE2;B4DSK9;Q92769;Q92769-3;H3BM24;A0A7R6V290;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;E5RK19 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 no no 0 1 0 4.5 0.5 1 1 51.242 51.293 3 2.1093E-05 14293 20230619_1885_Aki_TMTPro18x_K_F5 116.82 94.016 180960 192040 215520 172440 262540 251070 237960 208410 253520 59993 51118 31662 33131 32994 158980 33414 90811 32330 167900 175560 216470 177020 267900 247150 241670 211930 248760 68122 61346 33632 40467 34021 154960 33919 87141 30933 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180870000 19082 2659;4305 17883 36184;36185 28982 28982 1608 1 9606 Homo sapiens 0.03739790282793365 MTISNMEADMNR Unmodified 1411.5894 0.58940521 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9;H0YHT2;H0YIM6 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 0 0 4 0 1 51.785 51.812 2 2.2556E-05 14827 20230619_1883_Aki_TMTPro18x_K_F4 139.32 118.35 83679 61868 72330 82043 70601 87690 70758 75648 101330 83946 85632 83442 94226 82073 83280 96526 87193 96292 77242 56828 74450 81242 73644 87935 72301 78338 100840 84443 88945 84717 95395 85467 85170 96719 83451 91428 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49668000 19083 4170 17884 36186 28983 28983 1 9606 Homo sapiens -0.09992591859554523 MTISQQEFGR Oxidation (M) 1211.5605 0.56047157 3655 P55036;Q5VWC4;H0Y3Y9 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes no 0 1 0 5 0.816 1 1 1 40.041 40.132 2 8.3139E-05 9521 20230619_1885_Aki_TMTPro18x_K_F5 142.55 118.52 73024 55146 62672 68933 87513 79594 74580 75975 79304 76339 81674 80806 85999 71922 75792 93391 91791 84726 67412 50618 64910 68618 88478 79639 76102 77870 80651 77269 83869 81573 87156 75606 78228 92970 87621 80591 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154780000 19084 3655 17885 36187;36188;36189 28984;28985 28985 2353 2 9606 Homo sapiens -0.036846251020506315 MTISQQEFGR Unmodified 1195.5656 0.56555694 3655 P55036;Q5VWC4;H0Y3Y9 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes no 0 0 0 6.5 0.5 1 1 46.428 46.514 2 0.039968 12350 20230619_1886_Aki_TMTPro18x_K_F6 80.916 60.752 535680 439500 492550 514250 565120 614620 592580 553040 568970 629620 682380 545760 635980 478900 637110 568120 621970 464490 495000 403020 505180 514570 581830 612590 595220 571290 585750 629550 691950 555940 650040 501130 646560 564020 594150 442850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 283710000 19085 3655 17885 36190;36191 28986;28987 28986 2 9606 Homo sapiens -0.024403212394190632 MTLDEWK Oxidation (M) 937.42152 0.42151847 2368 B3KRA3;B3KNW5 yes no 0 1 0 5 0 1 50.273 50.349 3 0.014277 13879 20230619_1885_Aki_TMTPro18x_K_F5 79.116 46.985 18061 16479 18346 16792 18524 18634 16035 19812 18392 18711 19576 20279 21523 19533 21460 20878 21057 21487 16715 15087 18600 16973 19149 18744 16407 20116 18662 19013 20124 20493 21908 20239 21797 20998 20154 20400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12895000 19086 2368 17886 36192 28988 28988 1466 1 9606 Homo sapiens -0.04969542999549503 MTLDEWK Unmodified 921.4266 0.42660385 2368 B3KRA3;B3KNW5 yes no 0 0 0 5.5 0.5 1 1 56.22 56.288 2 0.0053138 16558 20230619_1886_Aki_TMTPro18x_K_F6 141.83 105.63 204450 199810 232270 200530 133690 245140 240720 213470 49090 262090 235350 227590 307200 220830 279650 264200 257650 260150 189490 182870 232110 203220 149730 243630 230880 221590 69144 260750 235980 232380 309510 230550 283540 264650 246750 247130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 498510000 19087 2368 17886 36193;36194 28989 28989 1 9606 Homo sapiens -0.037252391369293036 MTLSNPSELDELMSEEAYEK Unmodified 2315.0185 0.0184947 1323 A0A1W2PQV2;H3BUH9;Q6QN92;Q6IAT2;Q53XL7;P23434 GCSH Glycine cleavage system H protein, mitochondrial yes no 0 0 0 3 0 1 63.214 63.244 3 6.9515E-08 19813 20230619_1882_Aki_TMTPro18x_K_F3 107.41 92.795 18631 12676 14875 15356 15716 20746 17490 16898 18678 17333 19498 18500 18459 14840 20074 16977 20816 24457 17180 11637 15443 15358 16342 20472 17570 17539 18987 17533 19920 18605 18943 15560 20408 17451 19935 23137 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114720000 19088 1323 17887 36195 28990 28990 1 9606 Homo sapiens -0.08641380786139052 MTNGFSGADLTEICQR Unmodified 1798.7978 0.79781808 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0TAQ1;Q96IF9;Q0IIN5;Q9NTC4 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 6 0 1 55.601 55.677 2 4.0841E-05 16326 20230619_1886_Aki_TMTPro18x_K_F6 100.19 91.233 12253 9421.7 11370 13908 12865 16174 11892 12534 11848 16317 14226 14726 14602 13508 15455 16296 14604 17730 11319 8663.3 11662 13695 13235 16090 12054 13156 12195 16234 14509 14975 14936 14121 15660 16409 14002 16813 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11730000 19089 3656 17888 36196 28991 28991 1 9606 Homo sapiens -0.0696289174161393 MTNPAIQNDFSYYR Oxidation (M) 1734.7672 0.76716988 572 Q9NUQ9;A0A024R9G4;A0A8V8TMP7;Q68D08;Q9NUQ9-2;Q3ZTR9 FAM49B;DKFZp686B04128;BM009 Protein FAM49B yes no 0 1 0 6.5 0.5 1 1 50.154 50.233 2 4.151E-16 13672 20230619_1887_Aki_TMTPro18x_K_F7 206.1 191.86 108640 100190 110120 148110 120220 106580 103450 99291 91781 113320 140290 116750 123310 110670 120310 136790 125720 134820 100540 92068 112070 144970 123370 110820 105010 102450 96166 113840 140770 118300 126260 115720 122790 136880 120300 128040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168180000 19090 572 17889 36197;36198 28992;28993 28993 337 2 9606 Homo sapiens -0.07082302064372925 MTNPAIQNDFSYYR Unmodified 1718.7723 0.77225526 572 Q9NUQ9;A0A024R9G4;A0A8V8TMP7;Q68D08;Q9NUQ9-2;Q3ZTR9 FAM49B;DKFZp686B04128;BM009 Protein FAM49B yes no 0 0 0 8 0 2 54.627 54.694 2;3 8.4687E-29 15562 20230619_1888_Aki_TMTPro18x_K_F8 262 241.22 141970 120500 152660 184930 117320 156060 129730 143640 141670 171270 158040 173940 178810 163810 161820 204040 186680 182660 131390 110810 153850 180950 125180 159590 130620 148400 144490 171640 162410 176110 181130 171350 166450 203090 178350 173740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 580590000 19091 572 17889 36199;36200 28994;28995 28994 2 9606 Homo sapiens -0.05837998201741357 MTNYDVEHTIK Unmodified 1349.6286 0.62855113 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 0 5 0.816 1 1 1 45.597 45.666 3 2.2921E-06 11917 20230619_1885_Aki_TMTPro18x_K_F5 151.7 120.27 660780 494060 573470 683650 636000 817460 673300 724740 829040 844330 887540 969600 1056800 885740 777600 1178000 1265900 1301200 610010 454000 591560 676210 658050 813850 681710 749850 838450 850820 915490 976140 1060400 932120 824760 1184600 1206700 1234500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 497530000 19092 1062;1064 17890 36201;36202;36203 28996 28996 1 9606 Homo sapiens -0.032278002420298435 MTNYDVEHTIKK Unmodified 1477.7235 0.72351415 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 1 7.5 0.5 1 1 44.479 44.529 4 1.4073E-09 11166 20230619_1887_Aki_TMTPro18x_K_F7 173.68 152.38 509330 432430 536810 547660 672380 664560 593860 569180 577490 684310 805070 656730 657680 547560 715020 590420 657020 504420 471280 396790 545000 545080 684720 661170 603090 591140 598650 684380 807980 664490 678270 570620 722130 588400 628140 480570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 717630000 19093 1062;1064 17891 36204;36205 28997;28998 28997 2 9606 Homo sapiens 0.003761332291560393 MTPSYEIR Oxidation (M) 1011.4695 0.46953129 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 1 0 5.25 0.829 1 1 2 38.739 38.815 2 0.0018649 8934 20230619_1885_Aki_TMTPro18x_K_F5 126.57 80.215 328090 252320 305950 339490 408070 428920 379830 405500 449870 395690 458790 421000 433280 359860 381530 451610 460190 404420 303090 231760 314360 336760 414990 426360 386810 415460 454520 401270 468860 424460 440560 378010 393590 449540 439160 384830 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 620530000 19094 3811 17892 36206;36207;36208;36209 28999;29000;29001;29002 29000 2493 4 9606 Homo sapiens -0.035744690794899725 MTPSYEIR Unmodified 995.47462 0.47461667 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 6 0.816 1 1 1 43.511 43.596 2 0.0018696 11021 20230619_1886_Aki_TMTPro18x_K_F6 135.77 96.104 353590 276940 299400 357140 339510 389160 378930 369680 449900 414200 414660 392700 471590 362490 347290 495320 480020 407990 326460 254240 309650 354410 350860 390580 381880 380220 452930 415680 429290 398890 473480 382000 363450 490300 457500 388700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 604580000 19095 3811 17892 36210;36211;36212 29003;29004 29004 2 9606 Homo sapiens -0.023301652168811415 MTQNPNYYNLQGISHR Oxidation (M) 1950.9006 0.90064367 3312 O75643;A4FU77;B4E150;B4E0P5;Q9UNV9;A2RRQ7;Q7L5W4 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 1 0 2 0 1 42.298 42.378 3 1.7658E-14 10901 20230619_1881_Aki_TMTPro18x_K_F2 170.35 154.23 36990 31584 36404 32928 34060 38129 36266 36203 49967 41793 42628 40184 45686 41878 44562 47878 47227 47027 34208 28928 36971 33239 35653 38132 36867 37262 49817 41921 44202 40945 46504 43449 45498 47963 45160 44677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134160000 19096 3312 17893 36213 29005 29005 1946 1 9606 Homo sapiens -0.0367706295867265 MTSEVIEDEK Acetyl (Protein N-term);Oxidation (M) 1237.5384 0.53839872 514 A0A024R8E4;Q9BV86-2;Q9BV86;S4R344;S4R3J7 C9orf32;NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed yes no 1 1 0 1 0 1 47.094 47.094 2 0.00053863 13186 20230619_1880_Aki_TMTPro18x_K_F1 66.435 50.21 22243 20332 22758 27161 25769 31403 27656 26162 33935 31181 35082 32756 33838 29413 31111 37750 40957 36368 20587 18662 23153 26908 26608 31302 27965 27230 34250 31305 35867 33089 34461 30886 32262 37704 39060 34574 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10290000 19097 514 17894 36214 29006 29006 307 1 9606 Homo sapiens -0.07086894361123086 MTSGDVLSNR Oxidation (M) 1094.5026 0.50262234 474 H0YBS3;A0A024R7W0;Q9NX62 IMPAD1 Inositol monophosphatase 3 yes no 0 1 0 4 0 1 35.055 35.104 2 0.086573 7600 20230619_1883_Aki_TMTPro18x_K_F4 54.416 37.031 9512.9 4801.1 8933.7 11024 13870 17510 13883 13223 20846 15812 14685 11891 14943 12389 12996 13766 14847 13413 8770.9 4453.3 9215.9 10686 14048 17096 14197 13866 20586 15742 15345 12271 15152 12842 13355 13791 14178 12749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6842400 19098 474 17895 36215 29007 29007 293 1 9606 Homo sapiens -0.04084887027443074 MTSQEAACFPDIISGPQQTQK Oxidation (M) 2352.0726 0.072595956 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5QJR3;A0A8I5KV76;A0A8I5KRF4;A0A8I5KSH0;A0A8I5KVZ4;A0A8I5KQU6;A0A8I5KRC9;A0A8I5KTR5;A0A8I5KPV0;A0A8I5QJX1;A0A8I5KUU0 KDM1A Lysine-specific histone demethylase 1A yes no 0 1 0 7 0 1 55.842 55.903 3 3.7204E-08 16148 20230619_1887_Aki_TMTPro18x_K_F7 106.86 98.263 10927 9393.3 8871.8 10663 7847.9 8962 9836.5 9497.4 10049 11288 10843 10168 11497 10605 12865 12790 13899 13221 10092 8609.7 9178.7 10644 8292.2 9207 9811.7 9717.9 10265 11276 11118 10393 11785 11039 13114 12842 13284 12556 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31678000 19099 1785 17896 36216 29008 29008 1154 1 9606 Homo sapiens -0.04935743843952878 MTSQEAACFPDIISGPQQTQK Unmodified 2336.0777 0.077681334 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5QJR3;A0A8I5KV76;A0A8I5KRF4;A0A8I5KSH0;A0A8I5KVZ4;A0A8I5KQU6;A0A8I5KRC9;A0A8I5KTR5;A0A8I5KPV0;A0A8I5QJX1;A0A8I5KUU0 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 0 7 0 1 59.119 59.169 3 3.0688E-17 17479 20230619_1887_Aki_TMTPro18x_K_F7 167.84 153.22 44420 42762 48422 43974 32302 47121 38187 40227 44620 58977 50779 52112 62445 55307 54663 65404 61345 69197 41150 39145 48591 44383 35076 47251 38412 42067 45426 58383 52330 53318 63010 57489 56152 65741 58684 65654 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106920000 19100 1785 17896 36217 29009 29009 1 9606 Homo sapiens -0.036914399813213095 MTVNNLHPR Unmodified 1080.5498 0.5498473 4336 Q96DI9;Q9BY77;F6VRR5;B4E0L0;Q9BY77-2;B4DMM2 POLDIP3 Polymerase delta-interacting protein 3 yes no 0 0 0 1.5 0.5 1 1 35.349 35.377 3 2.7032E-06 7831 20230619_1881_Aki_TMTPro18x_K_F2 152.11 111.23 49410 39365 49508 55990 63159 64262 61615 64403 79035 53179 73055 59750 62891 57293 60159 66705 74874 66258 45682 36175 50526 55266 64463 64350 62746 65476 79170 54600 74692 60371 64424 59656 62067 66841 71437 62969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83148000 19101 4336 17897 36218;36219 29010 29010 1 9606 Homo sapiens 0.01279437034190778 MTVNNLHPR Oxidation (M) 1096.5448 0.54476192 4336 Q96DI9;Q9BY77;F6VRR5;B4E0L0;Q9BY77-2;B4DMM2 POLDIP3 Polymerase delta-interacting protein 3 yes no 0 1 0 7.33 0.471 2 1 28.706 28.771 3 2.4893E-05 5332 20230619_1888_Aki_TMTPro18x_K_F8 153.24 103.53 13776 10233 14867 14658 19826 17890 13924 18463 20855 12811 18261 20393 15590 13399 17131 14196 20413 13080 12739 9407.2 15076 14481 20023 17862 14610 18659 20721 13487 18756 20117 16075 14082 17555 14206 19448 12462 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29821000 19102 4336 17897 36220;36221;36222 29011;29012;29013 29013 2738 3 9606 Homo sapiens 0.00035133171559209586 MTVVWDK Unmodified 877.43677 0.4367746 3880;2441 B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 no no 0 0 0 1 0 1 55.312 55.312 2 0.0031438 16548 20230619_1880_Aki_TMTPro18x_K_F1 121.99 53.568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19103 2441;3880 17898 36223 29014 29014 1 9606 Homo sapiens -0.006846314116955909 MTVVWDK Oxidation (M) 893.43169 0.43168922 3880;2441 B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 no no 0 1 0 6.5 0.5 1 1 48.414 48.497 2 0.046581 12877 20230619_1887_Aki_TMTPro18x_K_F7 81.191 30.559 201590 171010 178520 179160 185850 193940 175480 163100 186810 206030 254600 226420 227790 198000 242400 228220 241440 223590 186270 156640 183330 180540 192160 194420 177990 169990 192390 206540 256710 228080 234010 206740 246100 228670 230900 212480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166670000 19104 2441;3880 17898 36224;36225 29015 29015 1508 1 9606 Homo sapiens -0.019289352743157906 MVAGANFYIVGR Oxidation (M) 1312.6598 0.65979168 3250 O43252;Q05BW9;Q4W5H3 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 1 0 3 0 1 52.715 52.774 3 0.032295 15380 20230619_1882_Aki_TMTPro18x_K_F3 54.27 37.737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19105 3250 17899 36226 29016 29016 1920 1 9606 Homo sapiens 0.015968175826856168 MVAGANFYIVGR Unmodified 1296.6649 0.66487706 3250 O43252;Q05BW9;Q4W5H3 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 5 0 1 57.432 57.49 2 5.9726E-05 16864 20230619_1885_Aki_TMTPro18x_K_F5 127.68 105.53 93143 79544 90833 78839 90263 131270 97375 92384 115500 108560 99609 96215 114180 94811 112970 122360 114840 121580 86132 72824 92422 80406 94274 127820 98328 97457 116050 108540 103590 98226 116000 99334 115050 122450 109910 115460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74762000 19106 3250 17899 36227 29017 29017 1 9606 Homo sapiens 0.02841121445317185 MVAPPAEPTR Oxidation (M) 1083.5383 0.53827956 1602 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70;B7Z2D3;E9PFI4;B7Z6D0;G5E9Y7;O43679-2;O43679-3;O43679 LDB1;LDB2 LIM domain-binding protein 1;LIM domain-binding protein 2 yes no 0 1 0 4 0 1 35.746 35.794 2 0.0062913 7863 20230619_1883_Aki_TMTPro18x_K_F4 82.75 62.196 38062 28880 38219 37067 45355 41620 38949 42195 47343 43893 52566 53969 51974 44859 49951 48424 60713 54964 35180 26515 38896 36829 46319 41775 39926 43104 47957 44575 53671 54019 52980 46762 51410 48981 57946 52157 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18884000 19107 1602 17900 36228 29018 29018 1043 1 9606 Homo sapiens -0.0001480477981203876 MVCDVVSR Oxidation (M) 980.44194 0.44193633 1253 A0A142CHG9;P09471-2;P09471;Q8N6I9;B3KP89;A0A1W2PP87 GNAO1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 1 0 4.5 0.5 1 1 37.26 37.329 2 0.062698 8394 20230619_1885_Aki_TMTPro18x_K_F5 66.457 49.984 63217 43642 61277 62378 72888 67839 69173 66102 84003 75564 97226 88354 73527 77501 83064 75594 97286 92892 58383 40132 62572 61516 74614 68164 70428 67918 85195 76272 98043 88764 76357 80153 85039 76998 92915 88062 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102090000 19108 1253 17901 36229;36230 29019 29019 798 1 9606 Homo sapiens -0.049066956113733795 MVCDVVSR Unmodified 964.44702 0.44702171 1253 A0A142CHG9;P09471-2;P09471;Q8N6I9;B3KP89;A0A1W2PP87 GNAO1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 6 0.816 1 1 1 42.678 42.762 2 0.0024479 10644 20230619_1886_Aki_TMTPro18x_K_F6 126.57 80.545 184900 158810 181240 181510 167800 198570 186470 176030 216100 223220 268710 288200 242170 224820 246130 257060 301270 302510 170990 145570 184220 181710 176010 199000 187920 182730 220510 225030 272210 287410 248360 235640 253310 260320 287730 286840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 244600000 19109 1253 17901 36231;36232;36233 29020;29021 29021 2 9606 Homo sapiens -0.0366239174875318 MVDPEKPQLGMIDR Oxidation (M) 1643.8011 0.80111254 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9;Q05D33;Q6PJL0 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 1 1 5.5 0.5 1 1 48.639 48.717 3 0.020863 13299 20230619_1886_Aki_TMTPro18x_K_F6 63.947 52.154 174100 148970 162690 199900 200480 220530 199880 189790 219410 201000 228480 231230 252680 218240 203620 266300 259660 273790 160940 136780 167010 197850 205260 220710 202150 196390 222760 203540 235040 233060 254860 228070 211360 267060 248000 259920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 404310000 19110 261 17902 36234;36235 29022 29022 156 1 9606 Homo sapiens 0.004964031030112892 MVDPEKPQLGMIDR Unmodified 1627.8062 0.80619792 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9;Q05D33;Q6PJL0 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 1 6 0.816 1 1 1 51.963 52.038 3 2.1223E-08 14752 20230619_1886_Aki_TMTPro18x_K_F6 145.7 132.81 348920 266920 320240 357990 250850 388240 338680 338800 399440 426060 373540 435990 489980 420210 374160 512470 501980 529140 322290 245180 327020 354310 269440 388830 338360 351910 402790 426270 389920 441490 491060 438890 390320 514010 479240 502300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 859700000 19111 261 17902 36236;36237;36238 29023;29024 29023 2 9606 Homo sapiens 0.0174070696562012 MVDREQLVQK Oxidation (M) 1260.6496 0.64962092 3701 P61981;B3KNB4;B4DE78 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes no 0 1 1 6 0.816 1 1 1 38.986 39.065 3 0.0031382 9152 20230619_1886_Aki_TMTPro18x_K_F6 86.879 51.385 224090 216450 227870 235880 207010 173560 215100 200740 218660 328030 363110 330680 321170 243640 257210 461440 442240 357930 207470 198240 230800 235950 216400 181170 216730 206730 228670 324480 363580 333010 326060 265670 274000 453720 420760 341370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 244590000 19112 3701 17903 36239;36240;36241 29025 29025 2389 1 9606 Homo sapiens 0.029722098574666234 MVDVGGQR Oxidation (M) 876.41235 0.41235077 526;3525;186 Q59FM5;P29992;O95837;G3V1P7;B7Z581;K7EL62;B4DEJ3;E9PC54;Q8N652;Q8IY73;Q03113-3;Q03113-2;P19086;Q03113;A0A024R240;P50148;A0A024R8M0;Q14344;Q14344-2 GNA11;GNA14;GNAQ;GNA12;GNAZ;GNA13 Guanine nucleotide-binding protein subunit alpha-11;Guanine nucleotide-binding protein subunit alpha-14;Guanine nucleotide-binding protein subunit alpha-12;Guanine nucleotide-binding protein G(z) subunit alpha;Guanine nucleotide-binding protein G(q) subunit alpha;Guanine nucleotide-binding protein subunit alpha-13 no no 0 1 0 4 0.816 1 1 1 32.39 32.463 2 0.039958 6463 20230619_1882_Aki_TMTPro18x_K_F3 70.69 50.987 65928 42261 72292 70811 86596 84948 75554 85467 83804 57249 96530 90727 83201 68107 97643 47588 98054 89297 60928 38953 73094 69324 88422 84813 77132 86508 85267 60404 97850 89820 85989 69970 98769 50654 93753 84405 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 53188000 19113 3525;186;526 17904 36242;36243;36244 29026;29027 29026 118 2 9606 Homo sapiens -0.030798915651985226 MVDVVEK Unmodified 818.42079 0.42079019 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 4 0 1 49.073 49.111 2 0.0074835 13572 20230619_1883_Aki_TMTPro18x_K_F4 124.83 67.554 383950 279910 312600 341650 317460 422680 351060 325950 530660 487950 536440 547860 593100 479080 351190 589680 615120 559990 354240 256910 323810 340930 331380 418910 357490 344090 530550 486580 552210 551160 592100 502320 377230 588430 585610 532400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 279440000 19114 1091 17905 36245 29028 29028 1 9606 Homo sapiens 0.004316623514114326 MVEADRPGK Acetyl (Protein N-term);Oxidation (M) 1059.5019 0.50189405 3564;3963 P38159;P38159-2;H3BT71;H3BR27;P38159-3;H3BNC1;A8K8A6;O75526;Q96E39;Q2VIN3;A0A1B0GUK8 RBMX;RBMXL2;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA-binding motif protein, X-linked-like-2;RNA binding motif protein, X-linked-like-1 no no 1 1 1 2 0 1 33.639 33.696 2 0.0090985 7128 20230619_1881_Aki_TMTPro18x_K_F2 55.37 48.15 27139 20329 26798 25723 11305 9200.8 14587 14294 11980 47575 64246 56273 34490 23571 24343 30056 33549 33646 25078 18663 26995 25332 13025 10702 14514 15168 14498 46454 62057 55575 35591 25756 25477 30288 32011 31919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24699000 19115 3564;3963 17906 36246 29029 29029 2232 1 9606 Homo sapiens -0.02547681676492175 MVEDCEHR Oxidation (M) 1090.4172 0.41717815 4310 Q92896;Q92896-3;Q92896-2;H3BM42 GLG1 Golgi apparatus protein 1 yes no 0 1 0 1 0 1 26.2 26.2 3 0.028067 4492 20230619_1880_Aki_TMTPro18x_K_F1 59.8 55.501 1598.1 1468.4 2129.7 2223.3 2693 1774.7 2054.4 2108.1 2513.8 1898.6 2160.1 2397.1 1500.7 1672.2 2660.5 1259.2 1935 1578.7 1482.9 1349.7 2126.4 2177 2725.2 1838.9 2123.4 2126.1 2519.2 1945.4 2207.8 2383.4 1609.7 1725.1 2637 1295.1 1855.9 1497.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2379600 19116 4310 17907 36247 29030 29030 2726 1 9606 Homo sapiens -0.12441375484763739 MVEDELALFDK Acetyl (Protein N-term) 1350.6377 0.63771883 4547 Q9HBM1;C9JW94 SPC25 Kinetochore protein Spc25 yes no 1 0 0 1 0 1 66.601 66.601 2 0.0017488 21128 20230619_1880_Aki_TMTPro18x_K_F1 48.64 32.066 7239.5 6571.6 6264.7 5851.5 6008.8 5603.3 7029.7 5228 8323.2 5744.7 7380.8 5179.4 8743.1 5609 5451.6 6172.7 8079.5 7458.6 6691.3 6010.2 6437.4 5972.8 6284.6 5685.7 7064.5 5387.5 8357.9 5769.2 7657 5308 8713.1 5813.7 5749.6 6263.3 7700.8 7072.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7497100 19117 4547 17908 36248 29031 29031 1 9606 Homo sapiens -0.023574516763801512 MVEFLQCTVPCR Unmodified 1538.7044 0.70437539 2409 B3KT11;C9JA08;Q96D46;B3KMN5;B4DKU1 NMD3 60S ribosomal export protein NMD3 yes no 0 0 0 2 0 1 60.58 60.592 3 0.022213 18891 20230619_1881_Aki_TMTPro18x_K_F2 58.098 45.331 21085 17902 19184 24396 18872 23447 21223 21548 27604 24264 26398 24531 28735 25455 24994 30291 26384 30199 19487 16440 19676 24078 19726 23728 21462 22225 27702 24399 27227 24942 29082 26479 25589 30341 25257 28670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60300000 19118 2409 17909 36249 29032 29032 1 9606 Homo sapiens -0.04342862657745172 MVEGFFDR Oxidation (M) 1015.4433 0.44331654 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;A0A804HJD7;A0A804HKE0;P49448;A0A140VK14;A0A804HJZ0;A0A804HHS2 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase;Glutamate dehydrogenase 2, mitochondrial yes no 0 1 0 4.5 0.5 1 1 50.583 50.637 2 0.01585 14296 20230619_1883_Aki_TMTPro18x_K_F4 88.294 71.054 82953 73823 79664 84717 105590 97984 99086 91034 115970 91272 112180 109480 99473 88793 105680 112610 103610 107140 76721 67663 81601 84848 107330 97984 100770 93519 116930 92833 114710 109670 102250 93487 107280 112460 99182 101800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63005000 19119 2542 17910 36250;36251 29033 29033 1546 1 9606 Homo sapiens -0.06378738250975857 MVEGFFDR Unmodified 999.4484 0.44840192 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;A0A804HJD7;A0A804HKE0;P49448;A0A140VK14;A0A804HJZ0;A0A804HHS2 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 5 0 1 56.915 56.977 2 8.6288E-06 16632 20230619_1885_Aki_TMTPro18x_K_F5 193.28 168.38 131870 118480 123380 133790 113640 154760 142950 146490 160600 151750 164340 174520 170990 157540 176050 162830 180500 201920 121950 108580 126000 134160 119860 154660 143010 150360 162720 153790 168840 175520 174630 163350 179110 165780 172800 191290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101240000 19120 2542 17910 36252 29034 29034 1 9606 Homo sapiens -0.051344343883556576 MVEPENAVTITPLRPEDDYSPR Unmodified 2528.2217 0.22170303 1039 A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160;Q14160-3;A0A0G2JMS7;Q14160-2;A0PJK8;H0YDF9;A0A669KAX5 SCRIB Protein scribble homolog yes no 0 0 1 4 0 1 54.959 54.97 3 0.011504 16216 20230619_1883_Aki_TMTPro18x_K_F4 83.776 69.615 14047 10687 14129 10799 9553.7 9931.2 12092 11642 14029 12011 14731 13438 14125 12606 14228 17483 14617 16272 12984 9790.4 14254 10903 10350 10156 12114 11788 14197 12166 15047 13568 14444 13283 14507 17412 13993 15462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22344000 19121 1039 17911 36253 29035 29035 1 9606 Homo sapiens 0.018721050504609593 MVGGEAAAAVEELVSGVR Acetyl (Protein N-term);Oxidation (M) 1801.888 0.88801329 4360 Q96HQ2-2;Q96HQ2 CDKN2AIPNL CDKN2AIP N-terminal-like protein yes no 1 1 0 3.5 0.5 1 1 67.035 67.061 2 1.2189E-23 21352 20230619_1882_Aki_TMTPro18x_K_F3 123.02 112.5 3763.9 2237.9 3917.8 2028.4 7110.4 4813.6 5244.5 4868.4 4168.6 3520.2 2957.2 3502.8 5157.5 3473.4 4850.8 4706.8 2900.5 2323.1 3475.6 2050.6 4000.2 2108.6 7054.7 4666.1 5360.8 4929.5 4265.9 3629.7 3194.4 3557.8 5171 3649.1 4829.3 4578.7 2790.1 2233.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8775800 19122 4360 17912 36254;36255 29036 29036 2746 1 9606 Homo sapiens 0.019144808584087514 MVGGEAAAAVEELVSGVR Acetyl (Protein N-term) 1785.8931 0.89309867 4360 Q96HQ2-2;Q96HQ2 CDKN2AIPNL CDKN2AIP N-terminal-like protein yes no 1 0 0 4 0.816 1 1 1 68.657 68.694 2 2.9868E-13 21954 20230619_1882_Aki_TMTPro18x_K_F3 95.651 85.419 1717.2 1314.1 2553.8 3779.9 1996.4 2124.1 3441.4 3465.2 2934.8 3796.6 3670.5 2830.1 4071.4 2622.2 2982.9 4234.4 3486.4 4099.1 1593.6 1200.7 2524.7 3587.5 1980.8 2299.9 3371.1 3457.7 3050.8 3786 3742.4 2914.7 4084.8 2802.1 3087.4 4217 3335.1 3892.5 2 1 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 5988100 19123 4360 17912 36256;36257;36258 29037;29038 29037 2 9606 Homo sapiens 0.0315878472104032 MVGGVLVER Oxidation (M) 974.5219 0.52190122 2200 B1AQP2;Q9UHV9 PFDN2 Prefoldin subunit 2 yes no 0 1 0 5.5 0.5 1 1 42.506 42.595 2 0.0049409 10572 20230619_1885_Aki_TMTPro18x_K_F5 91.516 59.161 80972 64212 74091 82117 79557 80317 76482 78860 89496 90092 108150 91666 92189 82002 96612 94929 98303 100580 74806 58941 75947 81428 82096 81344 77740 80975 91160 90495 109290 92726 94816 85587 98250 95515 94055 95463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 345920000 19124 2200 17914 36259;36260 29039 29039 1371 1 9606 Homo sapiens 0.03362114054118592 MVGGVLVER Unmodified 958.52699 0.52698659 2200 B1AQP2;Q9UHV9 PFDN2 Prefoldin subunit 2 yes no 0 0 0 6.5 0.5 1 1 48.027 48.111 2 0.00032126 12696 20230619_1887_Aki_TMTPro18x_K_F7 139.97 99.398 433110 358680 387760 422610 322770 407080 376870 361910 458010 486400 465780 458120 514110 408740 410850 560770 511910 509480 400160 328920 396920 421360 342500 411780 379500 376330 462580 484070 479470 464800 518160 431390 426000 557740 488800 484460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 621970000 19125 2200 17914 36261;36262 29040 29040 1 9606 Homo sapiens 0.04606417916727423 MVGSQDILCSENK Unmodified 1479.6698 0.66976402 2770 CON__ENSEMBL:ENSBTAP00000034412 yes yes 0 0 0 5.5 0.5 1 1 51.549 51.625 3 0.017429 14708 20230619_1886_Aki_TMTPro18x_K_F6 54.276 43.95 + 110000 63190 114190 141770 148560 128040 141390 156780 174060 128660 147820 148960 160870 152580 169500 161270 144710 168540 101560 58544 116290 136390 151140 131120 143990 157420 174300 132220 153530 150510 164260 157660 170800 162370 138860 159910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86675000 19126 2770 17915 36263;36264 29041 29041 1 -0.050884072648614165 MVGVKPVGSDPDFQPELSGAGSR Unmodified 2329.1372 0.13724512 2268 V9HW51;B2R960;O43396;K7EPB7;K7EKG2 HEL-S-114;TXNL1 Thioredoxin-like protein 1 yes no 0 0 1 7 0 1 53.995 54.062 3 5.333E-05 15368 20230619_1887_Aki_TMTPro18x_K_F7 80.303 72.764 7129.4 9151.7 10555 7765 3846.6 6156.2 5046.3 6487.5 7460.1 13210 9988.4 12699 13173 8570.5 9932.6 10061 10420 11071 6642 8358.7 10318 7951.3 4569.9 6361.8 5113.4 6781.8 7595.5 12960 10283 12749 13168 9070.5 10184 10144 9969.9 10502 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22157000 19127 2268 17916 36265 29042 29042 1 9606 Homo sapiens 0.025841990243407054 MVGVPAALDMMLTGR Unmodified 1560.7826 0.78262571 2908 E9KL44;H0YFD6;P40939;B4DDZ5;A0A2R8YG21;A0A2R8Y688 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 3.5 0.5 1 1 65.198 65.22 3 2.3783E-25 20626 20230619_1882_Aki_TMTPro18x_K_F3 182.89 169.77 33727 36665 41902 36588 33715 49903 47475 43714 52532 52327 47978 55528 55494 51916 50926 55195 57653 61455 31313 33544 41754 37162 36113 49295 47223 45313 53064 52532 49827 56066 56223 53835 52260 55756 55124 58290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 69712000 19128 2908 17917 36266;36267 29043;29044;29045 29044 3 9606 Homo sapiens 0.024665699274692088 MVHGVYK Oxidation (M) 848.42146 0.42145889 3343 O95139;O95139-2 NDUFB6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 yes no 0 1 0 1 0 1 34.71 34.71 3 0.0055712 7874 20230619_1880_Aki_TMTPro18x_K_F1 97.596 79.561 55140 33441 46518 53612 76180 87208 70430 69904 100270 23855 32079 31805 29540 27369 44097 25097 39594 29995 50838 30814 48474 52870 76727 85176 72176 71365 97484 26985 36037 31818 30972 28249 44225 25598 37861 28473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38372000 19129 3343 17918 36268 29046 29046 1958 1 9606 Homo sapiens -0.008814982088892975 MVIITGPPEAQFK Unmodified 1429.7639 0.7639224 3211 O00425;O00425-2;B4DKT5;F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1;D3DTW3;Q9NZI8-2;Q9NZI8 IGF2BP3;IGF2BP2;IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 3;Insulin-like growth factor 2 mRNA-binding protein 2;Insulin-like growth factor 2 mRNA-binding protein 1 yes no 0 0 0 1 0 1 61.116 61.116 3 0.00010839 18939 20230619_1880_Aki_TMTPro18x_K_F1 99.589 88.831 78720 63227 70789 74455 75557 80983 77691 77356 86935 91907 86333 84437 93994 82238 88568 102970 89793 106720 72721 57987 72656 74369 78169 81334 78512 79662 88084 91880 88940 86008 95444 86011 90313 103300 86019 101260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82325000 19130 3211 17919 36269 29047 29047 1 9606 Homo sapiens 0.06623099619582717 MVINHLEK Oxidation (M) 998.5219 0.52190122 3621 Q53HU0;P50990;P50990-2;Q7Z759;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 1 0 7.25 0.829 1 1 2 40.021 40.055 3 0.0015647 9483 20230619_1886_Aki_TMTPro18x_K_F6 108.3 54.335 1025800 793320 920380 1015900 1080200 1066000 1002800 1020000 1204600 1135100 1275400 1165400 1232300 1014600 1096100 1358200 1317200 1219000 947360 728290 946440 1008200 1106800 1073400 1022100 1048300 1218500 1142100 1302400 1177500 1252500 1069600 1130600 1350800 1257500 1159700 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1219500000 19131 3621 17920 36270;36271;36272;36273 29048;29049;29050;29051;29052 29048 2303 5 9606 Homo sapiens 0.02258114054109228 MVINHLEK Unmodified 982.52699 0.52698659 3621 Q53HU0;P50990;P50990-2;Q7Z759;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 7.5 0.5 1 1 44.14 44.19 3 5.9964E-05 11143 20230619_1888_Aki_TMTPro18x_K_F8 169.12 95.863 492870 429420 467160 453340 487480 526280 483020 497490 558720 597190 575370 568250 665130 510340 554170 712780 640290 580890 455730 393320 476860 457100 504680 526230 489820 512760 566050 597260 593360 576480 670410 539120 571080 705190 611380 553340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1624199999.9999998 19132 3621 17920 36274;36275 29053 29053 1 9606 Homo sapiens 0.03502417916718059 MVIPGGIDVHTR Oxidation (M) 1309.6813 0.6812554 1284;4185 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;E5RFU4;A9CQZ2;Q86U75 DPYSL2 Dihydropyrimidinase-related protein 2 no no 0 1 0 4.6 3.01 2 1 1 1 42.973 43.018 3 6.3995E-06 10458 20230619_1887_Aki_TMTPro18x_K_F7 137.16 77.732 141750 115920 147660 154020 171530 172900 177160 173370 206730 163400 180330 164090 174130 146270 176880 178970 186400 170950 131120 106430 149890 152650 176310 173430 179180 176820 207740 165780 185910 166060 178060 153200 180350 178880 178150 162510 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1285100000 19133 1284;4185 17921 36276;36277;36278;36279;36280 29054;29055;29056;29057;29058 29057 808 5 9606 Homo sapiens 0.038802026114353794 MVIPGGIDVHTR Unmodified 1293.6863 0.68634078 1284;4185 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;E5RFU4;A9CQZ2;Q86U75 DPYSL2 Dihydropyrimidinase-related protein 2 no no 0 0 0 4.2 2.79 1 1 1 1 1 48.268 48.329 3 4.476E-13 13717 20230619_1880_Aki_TMTPro18x_K_F1 195.85 136.43 456180 380320 439760 568740 405180 462390 464210 568050 582020 569800 557150 458000 622580 487400 539130 557210 625130 669980 421740 349650 448340 557230 425510 477820 468630 572870 585400 572300 574930 471430 629150 506080 554520 565030 597600 634990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2308000000 19134 1284;4185 17921 36281;36282;36283;36284;36285 29059;29060 29059 2 9606 Homo sapiens 0.05124506474066948 MVLAGVGVEHEHLVDCAR Unmodified 1990.9717 0.97170012 1879 A0A994J5K1;Q5SXN9;Q10713;Q10713-2 PMPCA Mitochondrial-processing peptidase subunit alpha yes no 0 0 0 5.5 0.5 1 1 47.527 47.605 4 2.7934E-19 12736 20230619_1885_Aki_TMTPro18x_K_F5 191.44 179.85 21466 20709 21220 22252 23388 23707 27574 26309 29244 28986 22539 25868 24433 22949 27545 28463 31624 29070 19869 18965 21617 22378 24213 23936 27601 26767 29450 29052 23561 26286 25051 24057 28184 28546 30201 27614 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185740000 19135 1879 17922 36286;36287 29061 29061 1 9606 Homo sapiens 0.01585313754503659 MVLDHLVIQR Unmodified 1222.6856 0.6856125 823;709 A0A087WVF4;O14646-2;O14646;A0A024RC75;O14647-2;O14647;A0A1B0GTU9;A8K9Y5;A0A0D9SEU0 CHD1;CHD2 Chromodomain-helicase-DNA-binding protein 1;Chromodomain-helicase-DNA-binding protein 2 no no 0 0 0 1 0 1 51.708 51.708 3 0.057427 15051 20230619_1880_Aki_TMTPro18x_K_F1 54.584 30.611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19136 823;709 17923 36288 29062 29062 1 9606 Homo sapiens 0.08317711824997787 MVLLESEQFLTELTR Unmodified 1807.939 0.93898623 3560 P37108;H0YLA2 SRP14 Signal recognition particle 14 kDa protein yes no 0 0 0 7 0 1 66.874 66.896 3 2.8395E-14 20876 20230619_1887_Aki_TMTPro18x_K_F7 184.76 171.93 6447.1 15785 18378 6831.5 25674 13682 21723 22379 12665 8346.7 8623.9 6926.7 8407 5765.6 21076 8247.2 9428.5 8427.4 6126.9 14352 17703 7790.6 25807 13578 21858 21862 13254 9130.3 9053.8 7077.3 9170.7 6125.7 20494 8298.2 9126.8 8006.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8433100 19137 3560 17924 36289 29063 29063 1 9606 Homo sapiens 0.06733429903306387 MVLVGDVK Oxidation (M) 875.47864 0.47863942 3683;2257 Q53FW2;P60891;B1ALA9;A0A2R8Y7H4;P60891-2;B7ZB02;A0A6Q8PHI4;A0A6Q8PEU0;A0A6Q8PG82;B2R860;P11908;A0A140VK41;P11908-2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 1 0 6.5 0.5 1 1 47.666 47.751 3 0.019718 12932 20230619_1886_Aki_TMTPro18x_K_F6 65.252 19.622 47248 36681 44233 41995 44668 44617 45510 44587 59689 59646 61056 51588 55710 49428 60253 60832 61533 62242 43652 33636 45168 42031 46380 44945 46287 45949 60067 59239 62289 52694 57258 51666 61264 61025 58867 59100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110880000 19138 3683;2257 17925 36290;36291 29064 29064 1403 1 9606 Homo sapiens 0.03591924276838654 MVLVGDVK Unmodified 859.48372 0.48372479 3683;2257 Q53FW2;P60891;B1ALA9;A0A2R8Y7H4;P60891-2;B7ZB02;A0A6Q8PHI4;A0A6Q8PEU0;A0A6Q8PG82;B2R860;P11908;A0A140VK41;P11908-2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 0 0 7.5 0.5 1 1 54.041 54.11 2 0.0049663 15393 20230619_1887_Aki_TMTPro18x_K_F7 124.08 53.167 548100 460840 525550 568110 578770 727440 622130 581750 692040 699460 711080 670230 691950 609920 727820 681800 758340 733680 506720 422760 536950 566860 598900 719940 626890 607560 701980 699890 727740 679680 708670 635000 740870 687100 725100 696390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 294030000 19139 3683;2257 17925 36292;36293 29065;29066 29065 2 9606 Homo sapiens 0.04836228139447485 MVMIQDGPQNTGADK 2 Oxidation (M) 1635.7233 0.72325615 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 2 0 4 0 1 42.761 42.804 3 3.9284E-06 10738 20230619_1883_Aki_TMTPro18x_K_F4 117.08 108.48 30406 17157 26571 28751 35417 38468 33142 37076 45748 34165 39839 55564 48754 44966 31338 63980 60678 68116 28031 15824 27457 28192 36055 38108 33936 37885 45629 35354 41624 55083 48714 47709 33975 64109 57824 64626 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80914000 19140 2644;4322 17926 36294 29067 29067 1597;1598 1 9606 Homo sapiens -0.06917654552989916 MVMIQDGPQNTGADK Unmodified 1603.7334 0.73342691 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 5.5 0.5 1 1 50.585 50.661 3 1.2373E-07 14194 20230619_1886_Aki_TMTPro18x_K_F6 126.71 107.03 120720 88724 99039 120520 100040 132350 110120 117880 160080 148330 140710 166750 204020 168290 119470 248520 221700 237800 111390 81519 102580 119200 104430 132530 112000 122230 159550 148920 148110 168620 202300 177790 129330 247410 211240 225910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 227270000 19141 2644;4322 17926 36295;36296 29068;29069 29069 2 9606 Homo sapiens -0.04429046827772254 MVMIQDGPQNTGADKPLR 2 Oxidation (M) 2001.9612 0.96119501 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 2 1 7 0 1 42.887 42.964 3 1.6564E-09 10428 20230619_1887_Aki_TMTPro18x_K_F7 130.21 117.55 53875 49727 56098 63523 91108 67094 63876 65202 47212 52585 63771 38305 35841 23911 72100 20862 23048 11683 49874 45620 57322 63054 90812 67620 65504 66402 49736 53340 63329 39085 39066 25005 69687 20682 22448 11235 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32721000 19142 2644;4322 17927 36297 29070;29071 29070 1597;1598 2 9606 Homo sapiens 0.00029286309427334345 MVMIQDGPQNTGADKPLR Oxidation (M) 1985.9663 0.96628039 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 1 1 7 0 1 46.401 46.489 3 0.029939 11966 20230619_1887_Aki_TMTPro18x_K_F7 51.56 42.617 69557 50877 66947 83631 79506 89023 87015 84676 83789 81633 92438 77909 79714 61148 85847 70468 66148 70702 64255 46855 68525 81763 81776 89459 87199 86740 85867 82535 93804 78725 81965 64159 86020 70737 63512 67134 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64059000 19143 2644;4322 17927 36298 29072 29072 1597;1598 1 9606 Homo sapiens 0.01273590172013428 MVMIQDGPQNTGADKPLR Unmodified 1969.9714 0.97136577 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 0 1 8 0 1 49.219 49.292 3 1.2407E-23 13199 20230619_1888_Aki_TMTPro18x_K_F8 198.85 171.52 158130 146200 179330 181990 150850 186740 202410 183520 148470 187440 177660 110590 119790 79472 204130 70327 68748 30638 146500 134090 180040 180940 160250 188350 199490 187850 155580 186740 178120 114700 127740 82630 197870 69091 66823 29660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285120000 19144 2644;4322 17927 36299 29073 29073 1 9606 Homo sapiens 0.025178940346449963 MVNHFIAEFK Oxidation (M) 1250.6118 0.61177885 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;P11142-2;Q53HF2;B4E1Q1;A8K7Q2;E9PN89 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 1 0 3 1.94 1 4 2 1 1 54.187 54.22 3 1.0029E-05 15451 20230619_1880_Aki_TMTPro18x_K_F1 146.9 124.02 804160 649950 724400 788760 848950 828850 829210 830950 916600 920560 915570 822550 984060 785950 845120 1097200 893020 899810 742920 596240 744610 785770 870800 835530 840030 851100 929250 922590 941730 839050 995210 828430 865890 1085800 854020 856710 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 10015000000 19145 3430 17928 36300;36301;36302;36303;36304;36305;36306;36307;36308 29074;29075;29076;29077;29078;29079;29080 29074 2055 7 9606 Homo sapiens -0.003502563373558587 MVNHFIAEFK Unmodified 1234.6169 0.61686423 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;P11142-2;Q53HF2;B4E1Q1;A8K7Q2;E9PN89 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 0 0 1.67 0.471 1 2 58.718 58.727 3 3.8455E-07 18010 20230619_1881_Aki_TMTPro18x_K_F2 174.4 133.12 577940 451380 509320 553990 427030 597950 558920 552410 646950 705220 633470 577950 771710 595700 573600 775630 671660 702800 533720 414190 522290 551600 454880 599980 558720 571530 654080 700720 656060 593420 773450 623760 593300 771860 641910 668180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12561000000 19146 3430 17928 36309;36310;36311 29081;29082 29081 2 9606 Homo sapiens 0.008940475252757096 MVNMHMEK 2 Oxidation (M) 1050.4297 0.42965709 4646 Q9P2A4-2 yes yes 0 2 0 1 0 1 27.021 27.021 3 0.066912 4817 20230619_1880_Aki_TMTPro18x_K_F1 40.045 31.532 1439.9 1163.4 901.95 1954.1 1524 4144.5 1654.8 1823.4 2686.4 2858.3 2263 4622.3 4448 5024.3 2240.9 5172.7 4025.3 8301.3 1327.2 1071.3 980.11 1931.1 1560.5 3963.1 1691.3 2050.1 2666.2 2891 2450.9 4620.3 4376.2 5176 2433.7 5360 3863.7 7835.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15470000 19147 4646 17929 36312 29083 29083 2842;2843;2844 1 9606 Homo sapiens -0.09354055346057066 MVNPTVFFDIAVDGEPLGR Acetyl (Protein N-term);Oxidation (M) 2134.0405 0.040491191 2036 P62937;A8K486;V9HWF5;B2RE56;B4DM82;F8WE65;C9J5S7;A0A7I2V5J5;A0A7P0S768;E5RIZ5 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 1 1 0 4.5 0.5 1 1 68.442 68.471 2 6.9324E-20 21536 20230619_1885_Aki_TMTPro18x_K_F5 143.98 139.08 0 0 0 0 0 830.19 0 0 834.06 673.97 0 0 1058.4 0 0 0 0 0 0 0 0 0 0 755.11 0 0 771.12 626.34 0 0 990.04 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 24129000 19148 2036 17930 36313;36314 29084;29085 29085 1278 2 9606 Homo sapiens 0.018832565352113306 MVNPTVFFDIAVDGEPLGR Acetyl (Protein N-term) 2118.0456 0.045576569 2036 P62937;A8K486;V9HWF5;B2RE56;B4DM82;F8WE65;C9J5S7;A0A7I2V5J5;A0A7P0S768;E5RIZ5 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 1 0 0 5.5 0.5 1 1 70.396 70.443 2 8.4051E-10 22268 20230619_1885_Aki_TMTPro18x_K_F5 108.17 94.742 0 0 0 1073.5 0 779.3 2099.8 967.24 0 1029.6 0 846.78 0 0 0 0 0 0 0 0 0 978.28 0 708.65 1925.2 924.5 0 1002 0 846.78 0 0 0 0 0 0 0 0 0 1 0 1 2 1 0 1 0 1 0 0 0 0 0 0 30719000 19149 2036 17930 36315;36316 29086;29087;29088 29086 3 9606 Homo sapiens 0.03127560397797424 MVPAGMGAGLER 2 Oxidation (M) 1219.5689 0.56892776 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 2 0 4.5 0.5 1 1 37.513 37.581 2 0.005089 8495 20230619_1885_Aki_TMTPro18x_K_F5 76.572 54.528 83034 72713 73593 80359 123520 100910 97973 92836 108480 87482 107140 90061 98073 74639 92172 105590 93197 91373 76740 66626 76291 80812 123410 100420 100560 95257 109810 88817 109470 90910 100030 79153 93965 104780 89147 86944 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190800000 19150 3194;3631 17931 36317;36318 29089;29090 29090 1874;1875 2 9606 Homo sapiens -0.03207394457058399 MVPAGMGAGLER Oxidation (M) 1203.574 0.57401314 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 1 0 6 0.816 1 1 1 43.778 43.863 2 1.1597E-06 11507 20230619_1886_Aki_TMTPro18x_K_F6 154.04 138.95 367240 290350 341350 360470 446310 458040 440200 412760 453480 434390 442790 438710 496570 408290 429460 511550 504080 504810 339300 266440 350590 359530 454830 454810 444500 425370 460960 438070 457150 444330 501890 427700 442450 511780 481580 479540 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 404700000 19151 3194;3631 17931 36319;36320;36321 29091;29092;29093;29094 29093 1874;1875 4 9606 Homo sapiens -0.01963090594449568 MVPAGMGAGLER Unmodified 1187.5791 0.57909852 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 7.5 0.5 1 1 49.573 49.651 2 1.1259E-12 13373 20230619_1888_Aki_TMTPro18x_K_F8 202.44 185.89 476000 406520 430080 457370 377770 544820 493170 497570 576110 554560 514180 519780 621610 511180 515910 618230 585540 627210 439920 372590 440280 458960 400840 542960 493160 513010 579890 556490 535160 529040 625940 533420 530890 619740 559860 595480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 606300000 19152 3194;3631 17931 36322;36323 29095;29096 29096 2 9606 Homo sapiens -0.0071878673184073705 MVPDFYVDSIADLLPALQG Oxidation (M) 2079.0234 0.023444144 1964 A6NDG6;H3BV17 PGP Phosphoglycolate phosphatase yes no 0 1 0 7 0 1 69.96 69.978 3 0.042777 22074 20230619_1887_Aki_TMTPro18x_K_F7 40.962 37.242 2778.4 0 835.85 0 1106 1454.5 1668.9 1664.4 2480.1 838.56 1610.4 1569 771.41 1419.3 906.59 1468.6 1880.5 1388.7 2538.2 0 1010.2 0 1151.2 1363.5 1672.9 1661.1 2437.2 917.12 1655.7 1556.8 827.44 1467.1 976.28 1469.2 1786.4 1321.6 1 0 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1943200 19153 1964 17932 36324 29097 29097 1245 1 9606 Homo sapiens 0.027093359294667607 MVPPVQVSPLIK Oxidation (M) 1322.7632 0.76319412 3666 P56385 ATP5I ATP synthase subunit e, mitochondrial yes yes 0 1 0 3 0 1 56.738 56.775 3 0.016997 17199 20230619_1882_Aki_TMTPro18x_K_F3 58.172 44.208 34688 32096 35107 35097 28763 38425 38065 38628 43740 39562 39812 33454 42589 30601 38959 36456 37875 43817 32105 29401 35543 35260 30683 38600 38025 39466 44070 39753 41111 34161 43163 32019 39607 36958 36290 41518 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73908000 19154 3666 17933 36325 29098 29098 2367 1 9606 Homo sapiens 0.11472304970516234 MVPTSDK Oxidation (M) 792.36875 0.36875462 3447 P13639;Q8TA90;Q6PK56;B4DRE8 EEF2 Elongation factor 2 yes no 0 1 0 5 0.816 1 1 1 36.797 36.865 2 0.028974 8181 20230619_1885_Aki_TMTPro18x_K_F5 91.626 24.592 121100 57894 137950 123560 181830 181070 151710 189710 158100 123240 164780 195050 161060 154040 173880 99854 209550 184190 111820 53648 139280 120080 184370 178810 155050 191280 160860 130270 168860 193180 165250 157380 178120 106200 199980 174150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 82160000 19155 3447 17934 36326;36327;36328 29099 29099 2091 1 9606 Homo sapiens -0.0357350106235117 MVPTSDK Unmodified 776.37384 0.37383999 3447 P13639;Q8TA90;Q6PK56;B4DRE8 EEF2 Elongation factor 2 yes no 0 0 0 5.5 0.5 1 1 41.304 41.394 2 0.0085955 10133 20230619_1886_Aki_TMTPro18x_K_F6 120.45 28.131 204660 112380 251510 231570 277880 333750 234400 299320 267250 226990 323360 360480 285880 273980 294340 152330 379340 347410 189210 103990 251870 225230 285510 328600 240220 306020 272410 237320 327760 356580 293610 279110 303010 166460 361910 328020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137600000 19156 3447 17934 36329;36330 29100;29101 29101 2 9606 Homo sapiens -0.02329197199742339 MVQDGDFVR Oxidation (M) 1081.4862 0.48624399 167 A0A024R1W3;Q96AY3;Q658U4;Q6ZME7;K7ESG6 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10;Peptidyl-prolyl cis-trans isomerase yes no 0 1 0 2.5 0.5 1 1 40.524 40.589 2 6.8802E-05 9872 20230619_1882_Aki_TMTPro18x_K_F3 157.2 131.46 176200 145650 152180 157720 212590 214560 197950 199630 237290 199570 240550 275130 234470 199810 235430 248800 278170 281080 162760 133460 157510 159090 215590 212400 201620 204940 239520 204020 246650 273270 239600 211170 241810 251000 265750 266620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281900000 19157 167 17935 36331;36332 29102;29103 29103 107 2 9606 Homo sapiens -0.05123968193561268 MVQDGDFVR Unmodified 1065.4913 0.49132937 167 A0A024R1W3;Q96AY3;Q658U4;Q6ZME7;K7ESG6 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 3.5 0.5 1 1 45.747 45.823 2 7.5657E-05 12214 20230619_1882_Aki_TMTPro18x_K_F3 159.58 135.61 238130 187550 199050 188310 220910 259140 263390 251810 298070 294130 305650 355070 321710 292570 302940 336100 344440 375770 219840 171780 205770 191210 229110 256540 264120 258840 302020 296840 314310 355400 327110 306090 310870 339180 329370 356370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 318840000 19158 167 17935 36333;36334 29104;29105 29104 2 9606 Homo sapiens -0.038796643309296996 MVQEAEK Oxidation (M) 849.39022 0.39021834 3430;1031 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96BE0;E9PS65;Q96H53;E9PM13;Q9NZ87;Q9NWW3;P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNX1;B4E1T6 HSPA8;HEL-S-72p;HSPA1A;HSPA1B;HEL-S-103 Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B no no 0 1 0 2.5 0.5 1 1 34.91 34.969 2 0.0049958 7663 20230619_1881_Aki_TMTPro18x_K_F2 132.08 78.53 58218 28494 79501 67696 121840 115860 82642 126770 91056 53257 100130 103960 70776 76687 95693 32202 110910 91113 53860 26451 79521 65745 121960 113680 86000 126610 92473 59289 101090 102280 74469 77627 97338 36596 105830 85988 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36805000 19159 3430;1031 17936 36335;36336 29106;29107 29106 600 2 9606 Homo sapiens -0.04050116033636186 MVQEAEK Unmodified 833.3953 0.39530372 3430;1031 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96BE0;E9PS65;Q96H53;E9PM13;Q9NZ87;Q9NWW3;P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNX1;B4E1T6 HSPA8;HEL-S-72p;HSPA1A;HSPA1B;HEL-S-103 Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B no no 0 0 0 3 0.816 1 1 1 40.064 40.113 2 7.5668E-05 9855 20230619_1881_Aki_TMTPro18x_K_F2 143.61 64.013 316500 133130 433700 449140 661610 688420 438730 668260 232490 316350 590450 638120 353750 458800 524990 164290 643050 529990 292670 124710 434210 430070 662040 676730 450050 673940 262810 347630 579310 626620 377690 463170 535250 191590 613340 499930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 228350000 19160 3430;1031 17936 36337;36338;36339 29108;29109 29108 2 9606 Homo sapiens -0.028058121710273554 MVQFEENGRK Oxidation (M) 1252.587 0.58702067 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2;E9PRC8;Q5SZX6;Q5SZW8;E9PQ35 CCT3 T-complex protein 1 subunit gamma yes no 0 1 1 5.5 0.5 1 1 37.468 37.552 3 0.0078124 8488 20230619_1885_Aki_TMTPro18x_K_F5 105.52 87.261 31894 25336 29075 30279 45144 39568 34097 35155 42386 35493 47714 47316 45985 33891 41893 50647 45027 36452 29464 23241 30003 30295 45263 39235 35281 36224 42901 36220 48619 47079 46756 36273 42892 49811 42992 34804 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94354000 19161 2435 17937 36340;36341 29110 29110 1501 1 9606 Homo sapiens -0.029169362107040797 MVQFEENGRK Unmodified 1236.5921 0.59210605 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2;E9PRC8;Q5SZX6;Q5SZW8;E9PQ35 CCT3 T-complex protein 1 subunit gamma yes no 0 0 1 6 0 1 42.004 42.098 3 0.0016732 10390 20230619_1886_Aki_TMTPro18x_K_F6 90.05 71.27 81256 58119 82617 72499 99521 90825 90651 89788 100810 95107 110800 93982 107510 86256 97304 107970 113830 98639 75086 53358 83978 72310 101650 90478 92254 91916 102510 95811 112940 95294 109320 90391 100090 107610 108650 93842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99204000 19162 2435 17937 36342 29111 29111 1 9606 Homo sapiens -0.016726323480952487 MVQLHLK Unmodified 867.50004 0.50004356 1275;194 P15884-3;A0A1B0GVR6;P15884-13;P15884-4;P15884-11;E9PH57;H3BTP3;P15884-2;A0A1B0GWD5;A0A1B0GVB8;A0A1B0GW91;A0A0D9SGH7;H3BPJ7;B3KVA4;A0A024R2C0;P15884-15;P15884-7;P15884-5;P15884-10;P15884-14;P15884-12;P15884;P15884-16;P15884-8;P15884-6;P15884-9 TCF4 Transcription factor 4 no no 0 0 0 3 0 1 47.311 47.39 3 0.016579 13003 20230619_1882_Aki_TMTPro18x_K_F3 82.305 18.999 118160 100460 110750 107110 129040 160720 116340 104530 159540 50598 43435 35743 49435 38142 62032 53130 45711 40741 109230 92027 113380 108320 132490 157130 119280 109260 155150 53866 50274 37136 50882 40073 61905 52489 43860 38846 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74214000 19163 1275;194 17938 36343 29112 29112 1 9606 Homo sapiens 0.06099354096204479 MVQVHELGCEGISK Oxidation (M) 1601.7542 0.75416235 2974 F5H365;Q15436;B4DSQ5;B4E0Q9;B4DF60 SEC23A Protein transport protein Sec23A yes no 0 1 0 5.5 0.5 1 1 44.246 44.332 3 8.8557E-06 11343 20230619_1885_Aki_TMTPro18x_K_F5 116.78 99.561 51043 38595 43072 46253 63000 51217 60635 63370 65934 63913 62845 57049 68944 57110 63642 73675 66987 71740 47115 35411 44720 46169 63669 51743 61426 63881 66777 64347 64859 58279 69912 59801 65051 73630 64093 68142 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115300000 19164 2974 17939 36344;36345 29113 29113 1762 1 9606 Homo sapiens -0.02264456448119745 MVQVHELSCEGISK Unmodified 1615.7698 0.76981241 1375 B4DRA5;B4DJW8;A0A2R8YFH5;Q15437;Q5QPE2 SEC23B Protein transport protein Sec23B yes no 0 0 0 6.5 0.5 1 1 48.285 48.368 3 0.00033547 13196 20230619_1886_Aki_TMTPro18x_K_F6 92.265 66.735 32558 24181 20384 36503 33786 30726 33649 30891 41055 28040 36178 31572 41672 27440 33895 40141 36253 34241 29995 22244 22013 35735 34019 31518 34134 31501 41164 28625 37550 31803 41934 29137 34767 39784 34650 32592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136440000 19165 1375 17940 36346;36347 29114 29114 1 9606 Homo sapiens -0.013441699310760669 MVRPNQDGTLIASCSNDQTVR Oxidation (M) 2377.1114 0.11144108 1628 A0A6Q8PFU3;P43034;A0A6Q8PFT2;A0A6Q8PG63;B4DF38;I3L3N5;B4DZN3 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 1 1 6.5 0.5 1 1 39.696 39.773 3 1.6937E-22 9355 20230619_1886_Aki_TMTPro18x_K_F6 180.04 170.63 70428 62277 62885 75912 61463 58204 66890 65916 63862 77601 82642 75542 83003 72787 81643 99849 83335 93664 65098 57114 64548 75313 64022 60421 67074 67158 66037 77703 83892 76766 84644 76591 83246 99498 79790 88991 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 138580000 19166 1628 17941 36348;36349 29115;29116;29117 29116 1054 3 9606 Homo sapiens -0.022030184895356797 MVRPNQDGTLIASCSNDQTVR Unmodified 2361.1165 0.11652646 1628 A0A6Q8PFU3;P43034;A0A6Q8PFT2;A0A6Q8PG63;B4DF38;I3L3N5;B4DZN3 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 1 7.5 0.5 1 1 43.073 43.118 3 5.572E-45 10517 20230619_1887_Aki_TMTPro18x_K_F7 247.35 234.41 115380 94680 114790 125030 80606 101980 118780 109690 114820 140310 134580 136560 152480 131770 136140 162400 160950 165980 106690 86926 116220 123470 87517 105020 117470 112420 118100 140000 137960 138660 154310 137710 140230 162820 153790 157590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 190620000 19167 1628 17941 36350;36351 29118;29119;29120 29118 3 9606 Homo sapiens -0.009587146269495861 MVSAEISENRK Unmodified 1262.6289 0.62888548 4111 Q6IQ49-3;Q6IQ49-2;Q6IQ49 SDE2 Protein SDE2 homolog yes no 0 0 1 6 0 1 40.823 40.916 3 2.3282E-06 9904 20230619_1886_Aki_TMTPro18x_K_F6 130.1 107.38 57744 42481 56598 57666 62651 72615 65952 70767 78298 77522 83369 77674 91676 75188 64810 98254 107260 90395 53352 39030 57694 57180 64729 72227 66708 72568 79283 77997 85585 78832 92052 78864 68895 97822 102100 86003 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60384000 19168 4111 17942 36352 29121 29121 1 9606 Homo sapiens 0.008076194778141144 MVSDINNAWGCLEQVEK Oxidation (M) 2007.903 0.90301143 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4 ACTN1 Alpha-actinin-1 yes no 0 1 0 6 0 1 61.438 61.493 3 1.8643E-07 18781 20230619_1886_Aki_TMTPro18x_K_F6 119.99 117.58 77101 67332 65446 68695 62567 72757 77199 78233 77826 96442 90914 89768 97302 86316 81566 113120 90336 100980 71234 61653 67436 69368 65652 73418 77033 80013 79867 96248 92927 91349 98379 90542 83885 112470 86421 96003 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208530000 19169 387 17943 36353 29122 29122 247 1 9606 Homo sapiens -0.060623953358799554 MVSGMYLGELVR Oxidation (M) 1369.6734 0.67339283 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J432;A0A994J428;B3KRA9;A0A994J4Q4;A0A994J6R6;A0A994J4P6 HK1 Hexokinase-1;Hexokinase yes no 0 1 0 1 0 1 57.923 57.923 2 0.0079702 17666 20230619_1880_Aki_TMTPro18x_K_F1 72.325 51.805 53209 44445 55390 69208 74157 80921 81359 88388 99934 73782 77432 77126 88537 79818 79864 91788 79703 86635 49224 40881 56469 67969 75739 81066 82157 89354 99788 75501 80991 78293 89634 82850 81424 91731 76309 82315 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79497000 19170 43 17944 36354 29123 29123 19 1 9606 Homo sapiens 0.003343072996358387 MVSSYVGENAEFER Unmodified 1616.7141 0.71407167 76 A0A024R040;P55809;Q6IAV5;A1E286 OXCT1;OXCT Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes no 0 0 0 3 0 1 51.441 51.507 2 1.3599E-08 14834 20230619_1882_Aki_TMTPro18x_K_F3 164.04 127.34 17253 15554 18273 20667 18283 23105 23001 17940 21418 22266 21877 22922 22472 22078 21862 24468 27443 27634 15971 14276 18500 20472 19127 23051 22859 18820 21935 22298 22464 23207 22914 22921 22563 24719 26205 26213 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54218000 19171 76 17945 36355 29124 29124 1 9606 Homo sapiens -0.06961679847017876 MVTEQEVDAIGQTLVDPK Acetyl (Protein N-term) 2013.9929 0.9928723 4439 Q9BU89 DOHH Deoxyhypusine hydroxylase yes yes 1 0 0 2.5 0.5 1 1 66.54 66.561 2 0.0039196 21434 20230619_1881_Aki_TMTPro18x_K_F2 40.113 34.08 1352.7 1274.1 1265.8 0 773 0 1158.1 1143.1 1093.2 1737.6 915.36 1087.6 933.31 0 0 1500.1 1531.9 853.37 1251.3 1156.6 1277 0 845.15 0 1144.1 1102.4 1114.3 1700.5 947.83 1095.3 904.25 0 0 1441.8 1446.2 819.88 1 1 1 0 1 0 1 1 1 1 1 1 1 0 0 1 1 1 3864600 19172 4439 17946 36356;36357 29125 29125 1 9606 Homo sapiens 0.026435575443201742 MVTGDNINTAR Oxidation (M) 1206.5663 0.56628523 664 P20020-1;P20020;P20020-4;P20020-6;P20020-2;P20020-5;A0A024RBC7;E7ERY9;Q59H63;A0A2U3U055;A0A994J581;Q68DH9;Q4LE63;A8K8U3;A7E2D8;Q01814-8;A0A2U3TZI3;A0A994J5M1;Q4J697;A0A2R8Y4R4;A1L3B5;A0A804HKZ0;Q01814;Q16720-4;P23634-6;A0A024R968;P23634;Q16720;Q01814-2;Q01814-6;P23634-7;Q16720-8;P23634-5;Q16720-7;Q16720-6;A0A024R2E4;Q01814-5;Q01814-4;P23634-3;Q16720-3;Q01814-7;Q16720-5;P23634-8;P23634-2;Q01814-3;P23634-4;Q16720-2;A1X4P8 ATP2B1;DKFZp686M088;ATP2B2 variant protein;ATP2B4;ATP2B2;PMCA2;ATP2B3 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2;Plasma membrane calcium-transporting ATPase 3;Plasma membrane calcium-transporting ATPase 4 yes no 0 1 0 4 0 1 34.693 34.743 2 6.291E-05 7432 20230619_1883_Aki_TMTPro18x_K_F4 139.43 111.61 12691 11870 16177 20486 22486 22421 23386 21361 27438 22076 23183 22705 22777 18236 23783 22815 27269 27123 11772 10929 16267 19985 22854 22494 23637 21922 27539 22301 23971 22872 23306 19214 24352 23095 26056 25716 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12835000 19173 664 17947 36358 29126 29126 409 1 9606 Homo sapiens -0.028735265903605978 MVTGDNINTAR Unmodified 1190.5714 0.5713706 664 P20020-1;P20020;P20020-4;P20020-6;P20020-2;P20020-5;A0A024RBC7;E7ERY9;Q59H63;A0A2U3U055;A0A994J581;Q68DH9;Q4LE63;A8K8U3;A7E2D8;Q01814-8;A0A2U3TZI3;A0A994J5M1;Q4J697;A0A2R8Y4R4;A1L3B5;A0A804HKZ0;Q01814;Q16720-4;P23634-6;A0A024R968;P23634;Q16720;Q01814-2;Q01814-6;P23634-7;Q16720-8;P23634-5;Q16720-7;Q16720-6;A0A024R2E4;Q01814-5;Q01814-4;P23634-3;Q16720-3;Q01814-7;Q16720-5;P23634-8;P23634-2;Q01814-3;P23634-4;Q16720-2;A1X4P8 ATP2B1;DKFZp686M088;ATP2B2 variant protein;ATP2B4;ATP2B2;PMCA2;ATP2B3 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2;Plasma membrane calcium-transporting ATPase 3;Plasma membrane calcium-transporting ATPase 4 yes no 0 0 0 5 0 1 39.574 39.663 2 0.00015846 9380 20230619_1885_Aki_TMTPro18x_K_F5 132.85 111.48 28259 19969 27118 32285 36414 39271 38448 40217 47595 36503 41803 34876 40335 35171 35376 36526 38437 34094 26100 18389 27819 31662 37148 39183 38918 40905 47696 37065 43045 35520 40984 36337 36233 36552 36716 32424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21630000 19174 664 17947 36359 29127 29127 1 9606 Homo sapiens -0.016292227277517668 MVVESAYEVIK Oxidation (M) 1282.6479 0.64788959 1577 P07195;Q5U077;A0A5F9ZHM4;A0A3B3IS95 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 1 0 6 0.707 1 2 1 55.909 55.975 3 5.7517E-05 16383 20230619_1886_Aki_TMTPro18x_K_F6 123.62 93.56 312940 251910 270380 291090 297780 458150 306930 301100 520110 303790 310870 321180 344090 307560 328550 391130 319150 366130 289010 230990 278890 292820 308970 446670 315300 318470 508770 308130 330270 324980 349580 322010 334220 390130 305780 347840 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1813099999.9999998 19175 1577 17948 36360;36361;36362;36363 29128;29129;29130;29131;29132 29129 1033 5 9606 Homo sapiens 0.017871560488629257 MVVESAYEVIK Unmodified 1266.653 0.65297497 1577 P07195;Q5U077;A0A5F9ZHM4;A0A3B3IS95 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 6.5 1.12 1 1 1 1 60.114 60.163 3 3.8279E-07 17838 20230619_1887_Aki_TMTPro18x_K_F7 166.97 115.53 1151900 940190 945240 1072300 852720 1893200 1058500 961360 1981200 1167700 1090900 1210100 1386400 1156800 1137100 1503300 1240800 1498000 1063600 861950 977970 1081800 908690 1828300 1082700 1052000 1928100 1173600 1174400 1224800 1394100 1213500 1168500 1503600 1187900 1421900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2952999999.9999995 19176 1577 17948 36364;36365;36366;36367 29133;29134;29135;29136 29135 4 9606 Homo sapiens 0.030314599114717566 MVVLSLPR Unmodified 913.54191 0.54190838 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5 0 1 56.648 56.709 2 0.090369 16565 20230619_1885_Aki_TMTPro18x_K_F5 65.313 48.765 65401 56389 75693 68069 68752 83027 78233 79462 87891 47869 43018 33970 39675 32900 60637 43558 45950 35282 60574 51714 75896 68009 72249 82713 78628 80564 87081 49720 46094 35141 41601 34542 60382 43196 44033 33638 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290830000 19177 3881 17949 36368 29137 29137 1 9606 Homo sapiens 0.08167909784719996 MVVPAALK Oxidation (M) 843.48881 0.48881017 1419 A0A7I2V5L3;Q9BSQ6;Q53H34;A0A384ME37;M0QYS1;P40429;A0A7I2V2L9;Q5QTS3;Q8J015;Q0VGL3;Q6NVV1 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 yes no 0 1 0 2 0 1 47.907 47.978 3 0.0074461 13506 20230619_1881_Aki_TMTPro18x_K_F2 81.297 60.967 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19178 1419 17950 36369 29138 29138 887 1 9606 Homo sapiens 0.060805320020676845 MVVPGLDGAQIPR Unmodified 1351.7282 0.7282056 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 3.67 3.09 1 1 1 57.895 57.918 2 3.3181E-15 16931 20230619_1888_Aki_TMTPro18x_K_F8 206.49 144.81 180090 180800 170720 160850 110720 138710 148760 149260 180500 217690 192540 193940 210620 180560 214070 274170 201090 211550 166680 165300 173240 164020 120980 142340 148890 153600 182780 215560 197820 197600 214550 191560 217250 270320 192600 201560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 649890000 19179 3606 17951 36370;36371;36372 29139;29140 29140 2 9606 Homo sapiens 0.06641062162589151 MVVPGLDGAQIPR Oxidation (M) 1367.7231 0.72312022 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 1 0 7.5 0.5 2 2 52.011 52.087 2;3 1.2041E-07 14402 20230619_1888_Aki_TMTPro18x_K_F8 158.85 118.5 146530 122040 139800 144100 133590 139390 142940 136650 169780 184310 182870 178470 198880 168600 176150 228290 203720 209490 135460 111920 142490 143690 139490 141310 144450 141100 172080 183540 187670 181200 201410 177390 181330 227240 194690 199150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 715030000 19180 3606 17951 36373;36374;36375;36376 29141;29142;29143 29143 2282 3 9606 Homo sapiens 0.053967582999575825 MVVPLACLLTPLK Unmodified 1453.8401 0.84006423 1375 B4DRA5;B4DJW8;A0A2R8YFH5;Q15437;Q5QPE2;A0A2R8Y633;A0A2R8Y7S7 SEC23B Protein transport protein Sec23B yes no 0 0 0 6.5 0.5 1 1 65.679 65.713 3 0.0011667 20397 20230619_1887_Aki_TMTPro18x_K_F7 83.182 67.292 25416 21100 21709 24367 21310 28361 29704 28350 39471 8176.1 11382 10391 10315 9364 12453 9839.4 12221 10924 23475 19345 22384 24396 22453 28359 29731 28432 38414 9471.7 12951 10439 10683 9715.5 12598 9950.3 11686 10369 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50781000 19181 1375 17952 36377;36378 29144 29144 1 9606 Homo sapiens 0.13129780195322382 MVVPVAALFTPLK Unmodified 1384.8152 0.81522969 2974 F5H365;Q15436;B4DSQ5;B4E0Q9;G3V4V1;G3V1W4;G3V3G5;G3V2R6;G3V5X8;G3V4Q2 SEC23A Protein transport protein Sec23A yes no 0 0 0 6.5 0.5 1 1 65.465 65.499 2;3 4.2911E-05 20531 20230619_1886_Aki_TMTPro18x_K_F6 91.961 65.842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19182 2974 17953 36379;36380 29145;29146 29145 2 9606 Homo sapiens 0.1382146838427616 MVYLLECLQK Unmodified 1295.6618 0.66176551 2396 B3KRK2;Q53HI2;Q9UJV9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes no 0 0 0 3 0 1 64.146 64.178 3 0.075947 20218 20230619_1882_Aki_TMTPro18x_K_F3 40.331 26.668 19592 16273 23597 24408 18018 22269 23445 22967 28463 26574 25771 30687 29958 25067 28849 30389 28323 31557 18148 14961 23562 23947 19316 22683 23487 23523 28606 26789 26789 30759 30387 26324 29335 30515 27127 29949 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46118000 19183 2396 17954 36381 29147 29147 1 9606 Homo sapiens 0.025761102763226518 MVYSTCSLNPIEDEAVIASLLEK Unmodified 2581.2655 0.26554168 3813 Q08J23-2;Q08J23;Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 0 0 0 6.5 0.5 1 1 66.908 66.941 3 3.5378E-19 20887 20230619_1887_Aki_TMTPro18x_K_F7 145.9 129.96 18452 11534 17351 23534 12624 15646 17271 17417 13357 21851 15863 17607 18289 17116 21182 24434 19345 20021 17028 10664 17684 22650 13615 16439 17037 17803 13976 21696 16291 18048 18735 18049 21406 24180 18532 19060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20588000 19184 3813 17955 36382;36383 29148 29148 1 9606 Homo sapiens 0.03815953432604147 MWDLSSNQAIQIAQHDAPVK Unmodified 2251.1056 0.10555106 3757 P78406;E9PQ57;E9PPG9;B0QZ36 RAE1 mRNA export factor yes no 0 0 0 8 0 1 60.449 60.485 4 1.0284000000000001E-45 17971 20230619_1888_Aki_TMTPro18x_K_F8 265.43 258.07 44858 35768 48355 45079 36556 49551 45410 45743 52714 55087 54104 51815 63895 53142 50010 53951 53074 63529 41499 32827 48641 44829 39213 49656 45528 47242 53369 55082 55846 52791 64226 54848 51291 54730 50823 60201 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84229000 19185 3757 17956 36384 29149 29149 1 9606 Homo sapiens 0.03004251061111063 MWDPHNDPNAQGDAFK Oxidation (M) 1857.774 0.77404617 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-3;M0QYR1 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 1 0 3.5 1.12 1 1 1 1 46.533 46.602 3 0.00040616 12470 20230619_1883_Aki_TMTPro18x_K_F4 77.324 67.575 128710 101310 115490 124300 114430 127050 130130 128020 146530 150960 155580 151030 171420 138230 149890 163670 158170 182870 118880 92961 118460 123690 119410 128300 130830 131350 148760 151330 159850 152910 173360 144430 153340 165090 151430 173400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 316690000 19186 33 17957 36385;36386;36387;36388 29150;29151;29152 29151 12 3 9606 Homo sapiens -0.12052989183825957 MWDPHNDPNAQGDAFK Unmodified 1841.7791 0.77913155 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-3;M0QYR1 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 0 5.5 0.5 1 1 50.698 50.774 3 3.1498E-11 14069 20230619_1885_Aki_TMTPro18x_K_F5 157.91 129.69 98307 82275 91556 91661 67404 103970 100890 98023 108060 125420 114720 115770 127730 104030 117290 132220 124580 135860 90863 75405 93249 91996 73065 104020 100030 101270 110030 124970 117970 117560 129420 109240 119940 132570 119200 128960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93126000 19187 33 17957 36389;36390 29153 29153 1 9606 Homo sapiens -0.10808685321194389 MWEVLESTTQTK Unmodified 1451.6966 0.6966307 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 7.5 0.5 1 1 62.247 62.278 3 0.00012865 18851 20230619_1887_Aki_TMTPro18x_K_F7 107.34 77.34 52838 63223 65226 65797 52845 70238 74647 70738 102240 81042 80128 74591 70066 56810 88926 79497 94880 101320 49093 57845 65074 66336 56555 70700 74829 72512 101620 81195 82807 75425 72733 60453 90372 80755 90767 95980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 442030000 19188 2337;3778;3779 17958 36391;36392 29154 29154 1 9606 Homo sapiens -0.011149753820291153 MWFQWSEQR Oxidation (M) 1312.5659 0.56589129 3239 Q5T8U5;Q5T8U7;O15260-2;O15260;B7Z605;B7Z8F3;B7Z7A8;O15260-3;B7Z1G8 SURF4 Surfeit locus protein 4 yes no 0 1 0 1.5 0.5 1 1 57.36 57.368 2 0.041322 17456 20230619_1880_Aki_TMTPro18x_K_F1 66.546 57.358 97085 79295 97630 98174 92026 116970 121260 117620 131210 75097 79239 70783 81361 67376 93288 80498 81902 74967 89775 72754 99089 97860 96922 116800 120830 118980 130830 78142 83832 72025 83539 70314 93949 80423 78425 71288 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84572000 19189 3239 17959 36393;36394 29155 29155 1907 1 9606 Homo sapiens -0.0778890151957512 MWVQLLIPR Oxidation (M) 1170.6583 0.65833512 180 V9HWJ8;A0A024R203;P61289;P61289-3;P61289-2;Q6FHK7;B3KQ25;K7ESG5;K7EMD0;K7EPX6;K7EKR3 HEL-S-283;PSME3 Proteasome activator complex subunit 3 yes no 0 1 0 7 0 1 63.346 63.379 2 0.0025022 19370 20230619_1887_Aki_TMTPro18x_K_F7 98.523 75.204 149430 116640 124480 147890 145390 149630 162790 164970 186420 142030 123960 108060 127930 112140 113390 158250 149600 112410 137940 107060 128980 146810 149820 151540 163800 166840 186010 143810 130190 111520 129860 117920 117790 155590 142530 107390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86279000 19190 180 17960 36395 29156 29156 115 1 9606 Homo sapiens 0.07983228284615507 MWVQLLIPR Unmodified 1154.6634 0.66342049 180 V9HWJ8;A0A024R203;P61289;P61289-3;P61289-2;Q6FHK7;B3KQ25;K7ESG5;K7EMD0;K7EPX6;K7EKR3 HEL-S-283;PSME3 Proteasome activator complex subunit 3 yes no 0 0 0 8 0 1 64.781 64.801 2 0.00097201 19854 20230619_1888_Aki_TMTPro18x_K_F8 136.11 116.64 140020 109840 128760 133400 102610 132360 152270 141680 159970 146630 95284 81795 127900 89322 86226 124380 120400 88126 129350 100770 131410 132810 110140 134090 150830 144230 160040 145980 102120 86255 127450 93847 90494 122290 114640 84205 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60479000 19191 180 17960 36396 29157 29157 1 9606 Homo sapiens 0.09227532147247075 MYAALGDPK Oxidation (M) 980.46372 0.46371763 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 6.5 0.5 1 1 45.557 45.644 2 0.0020206 11991 20230619_1886_Aki_TMTPro18x_K_F6 104.44 85.706 110640 83474 101000 111630 127910 125190 113550 116590 139460 131110 151910 140960 140770 117750 125170 148450 153730 143000 102180 76674 103840 110570 130290 125400 116150 120090 141090 132050 154690 141930 143290 123840 129260 148320 146740 135920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127630000 19192 3758 17961 36397;36398 29158;29159 29158 2443 2 9606 Homo sapiens -0.027295675911773287 MYAALGDPK Unmodified 964.4688 0.46880301 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7.5 0.5 1 1 51.031 51.108 3 0.045316 14056 20230619_1887_Aki_TMTPro18x_K_F7 39.022 9.6744 161600 136670 146990 154680 145900 183370 157700 159890 201270 203790 179940 159630 219610 169990 141580 243300 209150 185890 149350 125270 150580 155130 152240 182700 159690 166090 201870 202330 187110 164570 219130 178920 149630 239800 199300 177250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158860000 19193 3758 17961 36399;36400 29160 29160 1 9606 Homo sapiens -0.014852637285684978 MYEEFLSK Unmodified 1045.479 0.47903335 2223 P10644;B2R5T5;Q68DQ4;K7EM13;P10644-2;K7EPB2;B4DM81;A8K099;K7EKR1;A0A024R802;C9JSK5;H7BYW5;Q6NS41;P31321 PRKAR1A;DKFZp779L0468;PRKAR1B cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed;cAMP-dependent protein kinase type I-beta regulatory subunit yes no 0 0 0 6 0 1 59.516 59.578 2 0.080643 17915 20230619_1886_Aki_TMTPro18x_K_F6 66.692 28.97 142450 112230 133590 139450 132180 151320 141330 146220 160050 189550 173400 184730 210690 182310 168690 206000 205190 215340 131620 102990 136460 138760 137730 151990 142620 150860 162750 189070 178960 187620 211890 189410 174490 207050 196040 204390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38666000 19194 2223 17962 36401 29161 29161 1 9606 Homo sapiens -0.04188700793974931 MYEEHLK Oxidation (M) 964.43242 0.43241751 392 P84090;A0A024R6D4;G3V279 ERH Enhancer of rudimentary homolog yes no 0 1 0 3 0.816 1 1 1 37.098 37.151 3 0.0093807 8380 20230619_1882_Aki_TMTPro18x_K_F3 89.296 46.172 549630 377310 456420 509580 664110 625270 626820 589740 738220 637890 728220 673270 735030 613290 580810 699670 833600 699950 507000 346750 474760 505130 671880 622870 637340 606230 745100 643460 747330 680150 742810 639230 607850 701440 794210 665310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 893420000 19195 392 17963 36402;36403;36404 29162;29163 29162 252 2 9606 Homo sapiens -0.05122140625269367 MYEEHLK Unmodified 948.4375 0.43750288 392 P84090;A0A024R6D4;G3V279 ERH Enhancer of rudimentary homolog yes no 0 0 0 3.5 0.5 1 1 40.568 40.618 3 0.0041746 9777 20230619_1883_Aki_TMTPro18x_K_F4 112.17 64.428 1187100 861850 1017400 1129000 1316600 1430400 1304200 1306500 1609200 1499000 1509700 1504800 1685100 1465200 1217300 1735300 1820300 1611000 1095600 791600 1052900 1121900 1344200 1420600 1324800 1348000 1618400 1505400 1560700 1526500 1693000 1526700 1282100 1731100 1734400 1532200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1692299999.9999998 19196 392 17963 36405;36406 29164;29165 29165 2 9606 Homo sapiens -0.03877836762649167 MYEENSQPR Unmodified 1152.487 0.48697227 1154 A0A0U1RR39;A0A1B0GW38;A0A0U1RQX8;P22681 CBL E3 ubiquitin-protein ligase CBL yes no 0 0 0 2 0 1 34.573 34.63 2 0.00025249 7520 20230619_1881_Aki_TMTPro18x_K_F2 116.52 95.62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19197 1154 17964 36407 29166 29166 1 9606 Homo sapiens -0.08317173544514844 MYEEQSQDRR Unmodified 1340.5779 0.57791254 1355 A0A2R8YDW4;C9K048;C9JRB3;C9JU85;A0A2R8Y7I2;A0A2R8Y8D8;A0A2R8Y5E1;A0A2R8YFD4;B7ZAG1;B4DYP3;B8K284;Q13191-3;Q13191-2;Q13191 CBLB E3 ubiquitin-protein ligase CBL-B yes no 0 0 1 2 0 1 29.686 29.755 3 9.0189E-05 5635 20230619_1881_Aki_TMTPro18x_K_F2 112.75 74.114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19198 1355 17965 36408 29167 29167 1 9606 Homo sapiens -0.07875329567036715 MYESFIESLPFLK Unmodified 1602.8004 0.80036749 424 B3KY43;Q6DHZ2;A0A024R712;P31323;Q75MP1 PRKAR2B cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 2 0 1 66.454 66.461 3 0.00069644 21396 20230619_1881_Aki_TMTPro18x_K_F2 89.403 70.808 3800.9 2735.6 3299.5 4046.3 3486.6 4081.6 4183.5 3267.2 3961.9 3735.1 6061.1 6295.3 6260.2 3799.8 7203.4 5144.9 3174.7 6076.6 3508.1 2516.2 3401.4 3975.8 3627 4104.3 4170.3 3412.6 4127.4 3826.8 6133.5 6191.2 6410.1 4079.1 7076 5206.9 3096.5 5751.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5581400 19199 424 17966 36409 29168 29168 1 9606 Homo sapiens 0.023079317256133436 MYEVVYQIGTETR Unmodified 1587.7603 0.76029359 2686 Q584P1;B7Z3Y2;B7Z8A2;Q9UHG3-2;Q9UHG3 PCYOX1 Prenylcysteine oxidase 1 yes no 0 0 0 6 0 1 61.321 61.375 3 0.0042509 18701 20230619_1886_Aki_TMTPro18x_K_F6 77.527 65.661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19200 2686 17967 36410 29169 29169 1 9606 Homo sapiens -0.010076149449787408 MYGAQEDGSVGEGDLSCILK Oxidation (M) 2143.9402 0.9401848 4253 Q8NF37;D3DTC2;A0A0G2JQ62;A0A0G2JRI7 LPCAT1;AYTL2 Lysophosphatidylcholine acyltransferase 1 yes no 0 1 0 4 0 1 59.638 59.64 3 1.0979E-06 18178 20230619_1883_Aki_TMTPro18x_K_F4 94.856 78.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19201 4253 17968 36411 29170 29170 2711 1 9606 Homo sapiens -0.08602768580749398 MYIALTGLQHAGR Unmodified 1429.75 0.75000367 4531 Q9H845;Q9H9W4;H0Y8Z9;Q9BUX5;A0A7P0T8U3;A0A7P0T871;A0A7P0T7Z1;A0A7P0TB58 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 0 6 0 1 53.358 53.435 3 1.4246999999999999E-21 15348 20230619_1886_Aki_TMTPro18x_K_F6 232.17 207.66 65775 58225 56095 62814 62639 68250 73525 70083 78474 69112 66564 54062 71929 59374 65303 73895 64029 68887 60777 53337 57935 63155 64847 68668 73630 71442 79180 69468 69012 55816 72913 61860 66502 73720 61309 65465 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 237560000 19202 4531 17969 36412 29171;29172 29171 2 9606 Homo sapiens 0.052318669111400595 MYIEEQDDQDGSSWK Oxidation (M) 1845.7363 0.73632326 4397 Q96T23-2;Q96T23;H0YER1;Q05DG0;H7C306 RSF1 Remodeling and spacing factor 1 yes no 0 1 0 2 0 1 50.779 50.831 3 0.00029787 14843 20230619_1881_Aki_TMTPro18x_K_F2 88.507 75.675 25914 22663 28418 25632 29775 36058 31754 27199 36463 30616 32746 33148 35105 26756 32886 33382 34771 33026 23992 20770 28669 25784 30895 35465 32039 28499 36718 30856 33881 33320 35629 28173 33585 33420 33238 31379 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28561000 19203 4397 17970 36413 29173 29173 2759 1 9606 Homo sapiens -0.15271544959932726 MYPIDFEK Oxidation (M) 1057.479 0.47903335 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 1 0 6 0 2 54.116 54.193 3 0.019391 15698 20230619_1886_Aki_TMTPro18x_K_F6 65.465 45.136 78177 69110 77550 93442 72272 90509 86362 82834 100050 94832 104710 110100 109120 101870 94639 122260 113630 138540 72320 63450 78862 92286 75962 91532 86693 85525 101310 95690 107430 110830 110620 106410 97702 123350 108710 131320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 119470000 19204 134 17971 36414;36415 29174;29175 29175 54 2 9606 Homo sapiens -0.04740700793990982 MYPIDFEK Unmodified 1041.4841 0.48411873 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 6.5 0.5 1 1 58.71 58.767 2 0.0065233 17586 20230619_1886_Aki_TMTPro18x_K_F6 110.31 67.283 299580 233190 248940 327700 209370 355270 280870 285620 349300 410650 395650 582250 549830 496690 341540 593860 570810 683090 276540 214290 257130 323260 223750 355170 281240 300100 354250 413500 411520 579890 546800 520180 365040 599390 544710 647450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 219430000 19205 134 17971 36416;36417 29176;29177 29176 2 9606 Homo sapiens -0.03496396931382151 MYSDAFLNDSYLK Oxidation (M) 1581.7021 0.70211 1775;3977 A0A8I5KVF8;Q6MZM4;Q6MZP3;Q8N3U4;Q8N3U4-2;B2R8Y6;Q6AI02;Q6MZM3;B1AMT4;A0A8I5KUG8;Q68DW7;Q4LE48;Q8WVM7-2;Q8WVM7 DKFZp686P16143;DKFZp686I05169;STAG2;DKFZp686P168;DKFZp686C21148;DKFZp781D1416;STAG1 variant protein;STAG1 Cohesin subunit SA-2;Cohesin subunit SA-1 no no 0 1 0 6.5 0.5 1 1 60.402 60.452 3 3.6993E-06 18308 20230619_1886_Aki_TMTPro18x_K_F6 126.83 113.85 115770 106860 116490 116640 121140 132980 128550 125180 136610 135560 149230 151580 155550 131960 146060 161230 155390 170080 107140 97887 118350 117250 125640 133090 129460 128720 139230 136930 152830 152530 158100 138320 149290 162000 148690 161390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 69960000 19206 1775;3977 17972 36418;36419 29178;29179;29180 29179 1149 3 9606 Homo sapiens -0.06547296590224505 MYSDLRK Unmodified 911.45349 0.4534873 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5;Q9BWF4 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 1 1 0 1 41.127 41.127 3 0.014755 10580 20230619_1880_Aki_TMTPro18x_K_F1 76.847 48.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19207 2702 17973 36420 29181 29181 1 9606 Homo sapiens -0.005781305257528402 MYSHPLHNDPNLETVYTLCEK Oxidation (M) 2576.1676 0.16755897 3579 P42285;A8K6I4;B4E3M6 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 1 0 6 0 1 49.575 49.653 4 0.017207 13766 20230619_1886_Aki_TMTPro18x_K_F6 56.055 47.455 29265 23892 32000 34165 31785 28767 32026 28007 32343 43073 41495 40400 50408 35767 34390 43902 38323 44856 27081 21956 32278 33579 32975 29499 32300 29091 33361 42624 42509 40971 50345 37518 35524 44012 36674 42570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62322000 19208 3579 17974 36421 29182 29182 2250 1 9606 Homo sapiens -0.05747810372713502 MYSHPLHNDPNLETVYTLCEK Unmodified 2560.1726 0.17264435 3579 P42285;A8K6I4;B4E3M6 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 0 0 6 0 1 51.832 51.909 4 3.3494E-16 14741 20230619_1886_Aki_TMTPro18x_K_F6 154.26 141.34 43511 36821 42263 48339 42377 45737 46211 40407 49575 48590 52391 46917 50794 37903 43996 50482 54290 60669 40233 33800 43072 47821 44103 46330 46475 41903 50425 48622 53508 47420 51539 40109 45464 51070 51889 57492 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45898000 19209 3579 17974 36422 29183;29184 29183 2 9606 Homo sapiens -0.045035065101274085 MYSTDDGVQFHAFGR Oxidation (M) 1745.7468 0.74676879 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 1 0 5.5 0.5 1 1 47.46 47.539 3 4.830199999999999E-19 12711 20230619_1885_Aki_TMTPro18x_K_F5 206.2 198.02 55374 52999 52267 63616 67398 57429 62177 58719 71113 67529 64045 56863 64171 46711 68666 63781 65504 64581 51233 48585 53626 63288 68548 58633 63258 60157 71686 67452 66019 57882 65647 49475 69543 63878 62698 61334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209290000 19210 2436 17975 36423;36424 29185 29185 1505 1 9606 Homo sapiens -0.09627472724196195 MYSTDDGVQFHAFGR Unmodified 1729.7519 0.75185416 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 6.5 0.5 1 1 51.133 51.211 3 4.8553E-42 14419 20230619_1886_Aki_TMTPro18x_K_F6 271.04 257.53 160570 141090 155190 157170 139090 179240 161100 145710 192630 194960 187830 183230 194830 168380 181350 217760 216820 236830 148500 129290 157890 157730 146590 178790 162150 152540 194330 194090 193220 186080 198040 176840 186810 218970 207250 224670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 255520000 19211 2436 17975 36425;36426 29186;29187 29186 2 9606 Homo sapiens -0.08383168861564627 MYSYPAR Oxidation (M) 902.39564 0.39563807 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;P07910-4;D3DPI2;G3V2D6;G3V575;G3V555;B4DQQ2;P07910-3;G3V5V7 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 1 0 5.83 2.41 1 1 1 1 2 35.811 35.844 2 0.021944 7520 20230619_1887_Aki_TMTPro18x_K_F7 95.793 65.986 748440 608370 599090 685570 930970 1001700 835800 885980 1109200 320830 357630 283740 261590 221610 627220 351790 404640 221960 690890 557700 626520 690130 938840 986250 855920 897650 1082000 354910 398310 288560 287660 237330 617490 345090 388040 212860 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 847740000 19212 2226 17976 36427;36428;36429;36430;36431;36432 29188;29189;29190;29191;29192 29190 1387 5 9606 Homo sapiens -0.05946392451164684 MYSYPAR Unmodified 886.40072 0.40072345 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;P07910-4;D3DPI2;G3V2D6;G3V575;G3V555;B4DQQ2;P07910-3;G3V5V7 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 0 3.67 3.09 1 1 1 40.149 40.168 2 0.0077762 9880 20230619_1881_Aki_TMTPro18x_K_F2 122.54 86.909 1029800 844960 927100 944530 1189700 1363300 1134100 1166800 1434200 568840 569790 440480 510150 396140 824960 567780 662490 405850 951480 774490 954470 951350 1214600 1342100 1155300 1189200 1407000 604800 622500 452630 537630 419210 822840 559640 633660 388130 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 492170000 19213 2226 17976 36433;36434;36435 29193;29194;29195;29196 29195 4 9606 Homo sapiens -0.04702088588555853 MYSYVTEELPQLINANFPVDPQR Oxidation (M) 2739.3214 0.32141708 1178 X6RA14;U3KQT1;A0A140VJJ2;P10768;H7BZT7 ESD S-formylglutathione hydrolase yes no 0 1 0 7.5 0.5 1 1 64.565 64.59 3 4.1856E-20 19923 20230619_1887_Aki_TMTPro18x_K_F7 166.28 153.09 49091 38183 42564 48908 47494 48342 44685 45936 48764 49210 57504 56526 61990 52333 57881 68722 56965 70642 45329 35052 43882 48494 48854 48884 45368 47196 49807 49782 58783 56958 62918 54990 58946 68866 54607 67026 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 105970000 19214 1178 17977 36436;36437 29197;29198;29199;29200 29197 721 4 9606 Homo sapiens 0.02132922664486614 MYVPALIFGQLLTSSNYDDDEK Unmodified 2518.1938 0.19375695 3433 P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9;J3KTB7 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 2 0 1 67.443 67.45 3 1.3504E-05 21775 20230619_1881_Aki_TMTPro18x_K_F2 92.31 84.598 1987.8 1514.4 2145 2415.3 0 1734.2 844.66 965.27 2852.9 1923.2 1813.1 2473.7 1802.6 1936.8 1315.4 2122 2288.3 2382.2 1838.4 1393.9 2136.4 2354 0 1782.6 866.83 1067.6 2746.9 1912.6 1911.3 2464.6 1821.4 2023.4 1404.3 2141.7 2180.7 2259.5 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 929780 19215 3433 17978 36438 29201 29201 1 9606 Homo sapiens -0.004612179296145769 MYVPALIFGQLLTSSNYDDDEK Oxidation (M) 2534.1887 0.18867157 3433 P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9;J3KTB7 TOP2A DNA topoisomerase 2-alpha yes no 0 1 0 7.5 0.5 1 1 66.073 66.095 3 2.5922E-08 20397 20230619_1888_Aki_TMTPro18x_K_F8 102.33 93.617 5454.3 4049.1 7556 6452.4 6174.4 6727 5327 4157.7 5228.1 7669.1 8418.8 8106.3 7975.6 6356.4 8669.8 8109.3 6459.4 8108.2 5056.6 3727.3 7471.2 6319.4 6492.9 6721.9 5424.8 4525.6 5469.2 7573.6 8468.5 8149.1 8178.9 6709 8679.7 8123.1 6213.1 7695.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19712000 19216 3433 17978 36439;36440 29202 29202 2060 1 9606 Homo sapiens -0.017055217922006705 NAAALSQALR Unmodified 1013.5618 0.56179219 3042 H0YE28;Q8IZQ5 C11orf31;SELH Selenoprotein H yes no 0 0 0 2 0 1 44.838 44.92 2 9.4384E-07 12116 20230619_1881_Aki_TMTPro18x_K_F2 140.16 51.022 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19217 3042 17979 36441 29203 29203 1 9606 Homo sapiens 0.05555377049040544 NAAEELKPR Unmodified 1026.5458 0.54580778 3757 P78406;Q5J8M4 RAE1 mRNA export factor yes no 0 0 1 6 0 1 38.041 38.117 3 0.07076 8714 20230619_1886_Aki_TMTPro18x_K_F6 46.955 28.349 122490 90585 93916 113670 132930 133910 131940 137240 192010 140930 149090 141510 158170 127820 136200 144520 157750 133430 112970 83157 98480 113150 135040 133970 134860 140030 190350 142360 155290 143200 160090 133200 140110 144340 150560 126940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176810000 19218 3757 17980 36442 29204 29204 1 9606 Homo sapiens 0.033596708121422125 NAAGALDLLK Unmodified 984.5604 0.56039521 1319 P23193;A0A384MTX4;A0A1W2PPZ5;E5RIS7;B7Z4S1;E5RJ93;E5RK46;A0A1W2PS15;E5RFI1 TCEA1 Transcription elongation factor A protein 1 yes no 0 0 0 8 0 1 57.526 57.578 3 9.1804E-05 16794 20230619_1888_Aki_TMTPro18x_K_F8 131.46 92.436 124880 108050 118970 118340 123850 160010 126510 138720 184190 94937 89436 77402 87275 77537 103370 104060 98290 84736 115470 99003 121440 119250 128640 158100 129160 141950 180330 97966 96074 79499 89981 81353 104550 103070 93998 80737 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44633000 19219 1319 17981 36443 29205 29205 1 9606 Homo sapiens 0.06749742960289495 NAAHALPTTLGALER Unmodified 1533.8263 0.82633974 4243 Q8NBJ5;M0QX72;A0A8I5QKL8;A0A8I5QL08 COLGALT1 Procollagen galactosyltransferase 1 yes no 0 0 0 8 0 1 46.757 46.806 3 4.4268E-06 12168 20230619_1888_Aki_TMTPro18x_K_F8 90.725 70.062 48827 39792 43316 50388 50680 50365 51612 53975 70396 51166 55571 53094 61534 48745 65520 56853 59148 53742 45105 36518 44606 50013 52085 51027 52555 54816 70006 51957 57973 53690 62776 50866 66151 56863 56617 51098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 417650000 19220 4243 17982 36444 29206 29206 1 9606 Homo sapiens 0.08077962012134776 NAAHGPDSFASAAR Unmodified 1370.6327 0.63272531 551 E9PNU1;Q59GR0;B4DXC8;A0A024R8Z7;Q9Y5B8-2;Q9Y5B8 NME7 Nucleoside diphosphate kinase 7 yes no 0 0 0 5.5 0.5 1 1 33.102 33.164 3 4.1526E-06 6844 20230619_1885_Aki_TMTPro18x_K_F5 92.269 78.678 14343 10287 13476 14064 16009 20091 16086 15807 17867 15117 13756 12071 11747 14324 14407 12884 18589 13348 13245 9452.9 13807 13965 16453 19749 16267 16421 17934 15236 14215 12471 12218 14610 14823 13005 17709 12692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9612000 19221 551 17983 36445;36446 29207 29207 1 9606 Homo sapiens -0.03776574704079394 NAALGPGR Unmodified 754.40859 0.40858602 1315;3380 A0A1W2PPD9;Q7Z7Q9;Q9UMQ5;B4DP83;B4DRZ1;P04198 N-myc;MYCN N-myc proto-oncogene protein no no 0 0 0 6.5 0.5 1 1 31.441 31.507 2 0.048181 6365 20230619_1886_Aki_TMTPro18x_K_F6 71.296 39.36 42952 24006 47332 47115 53741 59896 58148 60399 62228 30716 37807 42350 41619 39964 49124 28283 56624 40778 39671 22194 47820 45818 55418 59552 58488 60867 62082 33038 40169 42376 42767 40675 50107 29386 53996 38657 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 14082000 19222 1315;3380 17984 36447;36448 29208 29208 1 9606 Homo sapiens 0.021558067232376743 NAAPPPSNTEAPPGETR Unmodified 1704.8067 0.80672651 3008 G3V529;Q9GZR7;B4DM03;B4DKV2;Q9GZR7-2;Q59FS7;A0A1W2PRR2;F5GYL3;B4E300 DDX24 ATP-dependent RNA helicase DDX24 yes no 0 0 0 2 0 1 34.189 34.245 2 0.073523 7379 20230619_1881_Aki_TMTPro18x_K_F2 66.498 55.333 2202.1 3519.5 3090.2 2558.9 4191 5209.1 4495 2652.6 3591.3 3358.7 4051.4 2556.5 3870.3 2888.4 4474.5 1867.5 3559.1 3413.3 2055.1 3209.8 3080.7 2700.5 4273 5010.3 4481.8 2908.5 3727 3336.7 4119.7 2644.6 3979.6 2920.5 4474 1988.2 3413.2 3226.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4853200 19223 3008 17985 36449 29209 29209 1 9606 Homo sapiens -0.017484587893022763 NAAQELATLLLSLPAPASVQQQSK Unmodified 2477.349 0.34895246 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;X6RE05 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 4.5 0.5 1 1 67.045 67.072 4 4.6782E-05 21231 20230619_1883_Aki_TMTPro18x_K_F4 81.312 73.6 4637.1 3576.8 3056.2 5425.8 4659.1 3253.7 3329.6 4788.6 4395.4 4453.3 5261.3 5183.5 6418.5 5354.5 3891.5 5006.2 5584.8 4961.3 4274.1 3289.9 3270.8 5294.9 4668.5 3493.7 3471.7 4776.8 4454.9 4539 5403.6 5236.2 6393.6 5499.1 4100.7 5031.8 5322.8 4715 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21186000 19224 4061 17986 36450;36451 29210;29211 29210 2 9606 Homo sapiens 0.16937193986996135 NAAQFLLSTNDK Unmodified 1320.6674 0.66737948 1204 A0A140VJT0;P63151;P63151-2;Q56VW8 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B yes no 0 0 0 4.5 3.5 1 1 56.385 56.413 2;3 2.8811E-13 17005 20230619_1880_Aki_TMTPro18x_K_F1 160.62 126.09 95256 89173 89729 104170 83636 103310 98186 91951 103270 125940 125100 121220 120540 109110 124630 130690 125380 129010 88118 81732 91618 103950 87837 104280 98341 95671 105890 125290 127130 122860 123390 114070 126730 130880 119980 122540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 282950000 19225 1204 17987 36452;36453 29212;29213 29212 2 9606 Homo sapiens 0.01987248384011764 NAAQVLVGIPLETGQK Unmodified 1636.9148 0.91482039 1127 B3KM48;A0A0S2Z5H7;D6RAX7;Q9BT78;Q53FV3;D6RFN0;Q9BT78-2 COPS4 COP9 signalosome complex subunit 4 yes no 0 0 0 1 0 1 61.338 61.338 3 0.00055282 19027 20230619_1880_Aki_TMTPro18x_K_F1 76.391 53.015 24703 21354 23146 29755 26907 33662 27140 27326 34396 30953 35493 35686 35315 30468 28169 37023 36602 42415 22838 19614 23743 29386 27704 33581 27577 28458 34661 31246 36346 35845 35719 31952 29287 37371 34979 40207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133870000 19226 1127 17988 36454 29214 29214 1 9606 Homo sapiens 0.12183957531942724 NAASTLTERPCYNR Unmodified 1651.7737 0.77365224 1995 A8IK34;Q6AI12 ANKRD40 Ankyrin repeat domain-containing protein 40 yes no 0 0 1 8 0 1 36.337 36.323 3 0.0017022 7987 20230619_1888_Aki_TMTPro18x_K_F8 76.588 65.148 24613 18495 24278 21696 15822 21317 23504 24672 24271 25857 26016 23562 29263 28035 23541 28473 29684 30844 22745 16966 24551 21661 17337 21655 23296 25000 24758 25998 26733 24191 29517 28790 24404 28726 28350 29266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34262000 19227 1995 17989 36455 29215 29215 1 9606 Homo sapiens -0.0261636411296422 NAAVALQEER Unmodified 1099.5622 0.56218613 4679 Q9UKU7-2;Q9UKU7-3;Q9UKU7 ACAD8 Isobutyryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 2 0 1 38.669 38.736 2 0.0059351 9224 20230619_1881_Aki_TMTPro18x_K_F2 88.134 40.106 63767 49670 56902 57788 72178 72778 68214 64609 103280 73820 75701 63021 80791 64699 55410 81054 83975 68936 58893 45554 58600 57899 73686 72298 70049 66806 102060 73879 79053 64591 81103 67561 58503 80439 79967 65659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45739000 19228 4679 17990 36456 29216 29216 1 9606 Homo sapiens 0.016387519782256277 NACDHLSGFNVCNR Unmodified 1662.6991 0.69910709 4720 Q9Y3B4 SF3B6 Splicing factor 3B subunit 6 yes yes 0 0 0 7.5 0.5 1 1 40.512 40.542 3 4.9901E-05 9710 20230619_1888_Aki_TMTPro18x_K_F8 99.834 93.397 12946 11565 14794 15298 20732 28388 19575 17025 25533 18837 25045 26060 22739 18121 21229 21642 24401 25318 11992 10615 14977 15299 21082 27432 19976 18229 25624 19182 25622 25856 23203 19145 21791 21897 23322 24005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35932000 19229 4720 17991 36457;36458 29217 29217 1 9606 Homo sapiens -0.10573450195988698 NACIECSVNQNSIR Unmodified 1663.7406 0.74063755 4650 Q9UBB4;A0A1W2PQD2;Q7Z524 ATXN10 Ataxin-10 yes no 0 0 0 5.5 0.5 1 1 41.459 41.554 2;3 6.2003E-13 10190 20230619_1885_Aki_TMTPro18x_K_F5 166.04 150.84 72955 48047 68979 65103 77942 75112 81048 78638 94016 75599 85074 86766 90228 73723 75450 84746 75671 76571 67347 44166 70503 64491 80266 75289 81931 80012 94634 76932 87932 87145 91193 77049 77047 84516 72405 72811 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284940000 19230 4650 17992 36459;36460 29218;29219 29218 2 9606 Homo sapiens -0.0646831422732248 NACVGTDLNR Unmodified 1118.5139 0.51385572 2795 CON__Q2KIG3 yes yes 0 0 0 4 0 1 35.721 35.768 2 0.00038544 7862 20230619_1883_Aki_TMTPro18x_K_F4 128.35 102.24 + 14759 9367.3 20244 22183 27845 31917 21141 24544 26247 30214 58678 75953 45941 56740 61752 30568 77391 96938 13670 8682.9 20234 21442 28145 31338 21900 25747 27702 31610 58263 74274 48166 57771 63206 34944 74031 91297 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26142000 19231 2795 17993 36461 29220 29220 1 -0.04066064933317648 NADDDRIPR Unmodified 1070.5105 0.51048491 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 1.5 0.5 1 1 30.283 30.317 3 3.7568E-06 5797 20230619_1881_Aki_TMTPro18x_K_F2 159.4 118.42 49163 35668 45552 50118 57615 50467 54932 50089 67537 60678 60910 57274 70743 58149 57496 51749 77111 55458 45400 32786 46767 49418 58739 51026 55912 51497 67835 60682 63200 58306 71265 59639 59735 52348 73440 52714 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 722550000 19232 3152 17994 36462;36463 29221 29221 1 9606 Homo sapiens -0.021949917156916854 NADELVK Unmodified 787.40758 0.40758296 3470 P17987;E7ERF2;F5H136;F5H726;F5H676 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 3.2 0.748 1 2 2 43.096 43.151 2;3 0.006005 11283 20230619_1881_Aki_TMTPro18x_K_F2 111.04 66.902 1112800 548780 1307400 1381800 1550900 1777600 1334300 1531700 1429100 1051100 1815800 2018300 1606100 1547700 1639800 739290 2027300 1819500 1027900 510000 1316000 1330300 1585900 1759800 1362100 1568900 1463600 1117800 1837200 1987200 1648700 1569300 1683000 819650 1934600 1717500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 738830000 19233 3470 17995 36464;36465;36466;36467;36468 29222;29223;29224;29225 29222 4 9606 Homo sapiens 0.005375475636697047 NADGLIVASR Unmodified 1014.5458 0.54580778 4668 Q9UJA5;Q9UJA5-4 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes no 0 0 0 5.5 0.5 1 1 42.94 43.034 2 0.00027705 10766 20230619_1885_Aki_TMTPro18x_K_F5 116.55 70.084 77264 59914 72405 78290 101350 99851 88740 81891 100810 87758 103680 95940 102460 99222 93905 102460 139010 96567 71384 55013 74411 77809 102570 98946 90560 85075 102100 88694 106130 97192 104340 102340 98154 102580 132280 91938 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54294000 19234 4668 17996 36469;36470 29226;29227 29226 2 9606 Homo sapiens 0.039116708121468946 NADGTICYDSTHYK Unmodified 1643.6886 0.68858521 3450 V9HWI0;P14550;Q5T621 HEL-S-165mP;AKR1A1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 4.5 0.5 1 1 42.37 42.433 3 3.0742E-07 10538 20230619_1885_Aki_TMTPro18x_K_F5 139.6 128.34 105960 83121 105600 112790 113870 117540 118280 120690 115280 115750 139090 153670 122070 103040 115670 120450 147260 160690 97949 76350 107460 111520 117640 118570 118970 122970 118530 118330 140950 152500 124840 108920 119510 122990 140690 152150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77987000 19235 3450 17997 36471;36472 29228;29229 29229 2 9606 Homo sapiens -0.10751154369472715 NADGYKLDK Unmodified 1022.5033 0.50327426 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q86UM1;C9JZG1 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 1 6 0 2 41.643 41.737 3 0.0074069 10240 20230619_1886_Aki_TMTPro18x_K_F6 80.979 45.438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19236 487 17998 36473;36474 29230;29231 29230 2 9606 Homo sapiens -0.007077243161006663 NADHSMNYQYR Oxidation (M) 1413.5732 0.57316152 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;K7ELV3 ILF3 Interleukin enhancer-binding factor 3 yes no 0 1 0 4 0.756 2 3 2 26.672 26.762 3 5.1071E-05 3867 20230619_1883_Aki_TMTPro18x_K_F4 126.19 106.43 33254 27813 32537 36124 39016 40443 42051 42368 39948 40979 50507 46240 42796 40067 40790 44929 45487 40479 30748 25529 33232 35853 40059 40614 42167 43110 41225 41636 50958 46519 43848 41761 41795 44819 43441 38512 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 88337000 19237 3823 17999 36475;36476;36477;36478;36479;36480;36481 29232;29233;29234;29235 29232 2503 4 9606 Homo sapiens -0.11708213709812298 NADHSMNYQYR Unmodified 1397.5782 0.5782469 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;K7ELV3 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 5 0.816 1 1 1 32.508 32.567 3 2.4616E-17 6546 20230619_1883_Aki_TMTPro18x_K_F4 231.05 217.39 55153 40912 58678 56163 65841 62634 69968 71716 70093 80121 91486 86456 84168 72479 73589 83137 86739 74343 50996 37593 59401 55565 67824 63067 70340 72841 72279 80671 92493 87022 85633 75762 75791 82870 82778 70750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 124300000 19238 3823 17999 36482;36483;36484 29236;29237;29238 29237 3 9606 Homo sapiens -0.1046390984718073 NADLNAQTVVK Unmodified 1171.6197 0.619701 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;H7C5N8 PRRC2C Protein PRRC2C yes no 0 0 0 6 0 1 44.939 45.028 3 0.0049756 11704 20230619_1886_Aki_TMTPro18x_K_F6 71.241 44.126 86566 64508 86239 91796 78898 80937 82900 90121 105720 95734 114670 100450 109240 99378 94108 101940 121690 104930 79998 59298 87536 90311 82629 82877 84121 91590 106710 96617 116870 101790 111010 102660 97518 102560 116050 99696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90154000 19239 2894 18000 36485 29239 29239 1 9606 Homo sapiens 0.04075594183791509 NADMSEDMQQDAVDCATQAMEK Oxidation (M) 2502.9607 0.9607386 4348 Q96FJ2 DYNLL2 Dynein light chain 2, cytoplasmic yes yes 0 1 0 3 0.816 1 1 1 55.626 55.65 3 1.793E-05 17245 20230619_1882_Aki_TMTPro18x_K_F3 88.872 86.109 26887 25186 24218 25978 25320 28289 28179 28678 27222 32338 31415 28491 34264 28739 33519 30707 27050 31101 24863 23059 24852 26215 26291 28452 28226 29362 27984 32359 32148 29111 34827 29750 33726 30862 25971 29521 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 26446000 19240 4348 18001 36486;36487;36488 29240;29241 29241 2741;2742 2 9606 Homo sapiens -0.23062334045516764 NADMSEEMQQDSVECATQALEK 2 Oxidation (M) 2545.0254 0.025447346 3739 Q6FGH9;P63167;F8VXL2;F8VRV5;F8VXI7 DNCL1;DYNLL1 Dynein light chain 1, cytoplasmic yes no 0 2 0 1.5 0.5 1 1 52.07 52.09 3 1.4884E-08 15236 20230619_1880_Aki_TMTPro18x_K_F1 109.85 102.74 15219 13482 13555 19794 19982 15641 18062 18256 18376 19734 22194 19607 21354 15324 19198 22883 21616 23068 14067 12389 14035 19404 20145 16205 18334 18517 18864 19850 22536 19783 21698 16363 19714 22870 20669 21903 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136270000 19241 3739 18002 36489;36490 29242;29243 29242 2414;2415 2 9606 Homo sapiens -0.18526435967942234 NADMSEEMQQDSVECATQALEK Oxidation (M) 2529.0305 0.030532724 3739 Q6FGH9;P63167;F8VXL2;F8VRV5;F8VXI7 DNCL1;DYNLL1 Dynein light chain 1, cytoplasmic yes no 0 1 0 1.75 0.661 3 4 1 55.493 55.507 3;4 7.9146E-31 16947 20230619_1881_Aki_TMTPro18x_K_F2 204.47 197.83 169430 141990 155080 160670 159440 169600 173490 169970 196530 195440 207290 181670 204720 166000 197860 221440 207880 214420 156580 130150 158820 160900 165640 170900 174850 174300 199350 195740 211910 184670 208640 174730 202000 221170 198850 203710 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 549060000 19242 3739 18002 36491;36492;36493;36494;36495;36496;36497;36498 29244;29245;29246;29247;29248;29249;29250;29251 29250 2414;2415 8 9606 Homo sapiens -0.1728213210526519 NADMSEEMQQDSVECATQALEK Unmodified 2513.0356 0.035618102 3739 Q6FGH9;P63167;F8VXL2;F8VRV5;F8VXI7 DNCL1;DYNLL1 Dynein light chain 1, cytoplasmic yes no 0 0 0 2 0.816 1 1 1 59.692 59.706 3 5.7135999999999996E-39 18485 20230619_1881_Aki_TMTPro18x_K_F2 242.22 233.93 129350 117700 136740 129140 105320 143970 142990 147890 157640 171820 152130 155870 186700 157860 156230 197910 184490 190310 119740 107830 137810 129760 113090 144520 142510 151410 159680 171860 157880 159060 188030 164910 161190 197690 176290 180820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 502270000 19243 3739 18002 36499;36500;36501 29252;29253;29254 29253 3 9606 Homo sapiens -0.16037828242679097 NADNDWFR Unmodified 1036.4363 0.43625733 4723 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 yes yes 0 0 0 3.5 0.5 1 1 47.515 47.575 2 0.0074119 13045 20230619_1882_Aki_TMTPro18x_K_F3 107.69 81.957 428390 344570 475030 447730 487350 522290 492300 482060 636790 519500 556290 540510 602570 469960 534230 482560 652960 613970 396440 316320 478660 444710 505350 521570 500590 496270 637070 523950 576400 545260 610110 488220 550650 492270 623330 581900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108630000 19244 4723 18003 36502;36503 29255 29255 1 9606 Homo sapiens -0.08050334807194304 NADPILISLK Unmodified 1082.6336 0.63356015 676 Q9ULV4-3;Q9ULV4-2;Q9ULV4;Q59EA2;A0A024RBI5;B3KN06;Q53G58;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 CORO1C Coronin-1C;Coronin yes no 0 0 0 7.5 0.5 1 1 59.89 59.932 3 0.0001349 17735 20230619_1888_Aki_TMTPro18x_K_F8 123.62 79.241 244120 201190 213580 243670 227510 257980 245590 246990 284200 257260 256650 236300 267980 227730 255690 288070 257500 259450 225510 184540 219900 242760 235870 259540 247780 253360 286230 258880 265000 240710 272570 238370 260500 286830 246370 246720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 243660000 19245 676 18004 36504;36505 29256;29257 29257 2 9606 Homo sapiens 0.0955487168291711 NADVELQQR Unmodified 1071.5309 0.530886 1042;3360 O94973-2;O94973;B7Z5S9;A0A0G2JS82;B7Z1Q4;O94973-3;A0A8I5KPP9;A0A0G2JQM1;O95782-2;O95782;Q8N9K4 AP2A2;AP2A1 AP-2 complex subunit alpha-2;AP-2 complex subunit alpha-1 no no 0 0 0 2 0 1 36.021 36.077 2 1.1035E-05 8096 20230619_1881_Aki_TMTPro18x_K_F2 171.46 139.93 131680 80874 122030 142710 137260 133270 139850 144430 176610 162420 205970 189530 190830 168230 165110 111500 218830 185690 121500 74613 125100 138810 141370 135700 142030 147280 178900 164030 209120 190340 194070 171320 170980 117320 208620 175710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113340000 19246 1042;3360 18005 36506 29258 29258 1 9606 Homo sapiens -0.002018210558617284 NADYVQEVK Unmodified 1064.5138 0.51383895 2013 Q9HCJ6;A8K288;Q8NDE0 VAT1L;DKFZp547P162 Synaptic vesicle membrane protein VAT-1 homolog-like yes no 0 0 0 3.5 0.5 2 2 44.664 44.723 2;3 0.00051086 11547 20230619_1883_Aki_TMTPro18x_K_F4 133.23 117.97 133610 107300 122340 125590 133780 120290 177310 163830 247070 144830 137300 141160 172010 119930 125470 169920 166990 145420 123450 98399 125420 125350 139130 123120 178210 163870 243060 147450 147520 142810 172160 127150 130930 168440 159220 138460 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 329930000 19247 2013 18006 36507;36508;36509;36510 29259;29260;29261 29261 3 9606 Homo sapiens -0.015837416616705013 NAEALAELSESLR Unmodified 1401.71 0.70997257 4496 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 0 0 0 4 0 1 60.162 60.164 3 0.010169 18389 20230619_1883_Aki_TMTPro18x_K_F4 49.595 31.458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19248 4496 18007 36511 29262 29262 1 9606 Homo sapiens 0.02518598721599119 NAEDCLYELPENIR Unmodified 1734.7883 0.78829925 4107 Q9P0Q6;Q6GVN4;Q9NZ63 C9orf78 Uncharacterized protein C9orf78 yes no 0 0 0 2 0 1 56.517 56.536 3 0.035109 17175 20230619_1881_Aki_TMTPro18x_K_F2 47.548 33.29 63074 52398 57471 61231 58204 63801 61476 60428 75724 66492 78211 69018 79367 63953 68581 83004 65184 78916 58286 48045 58876 61156 60518 64258 62248 62142 76397 66979 80102 69853 80414 67155 69829 82833 62495 74947 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26781000 19249 4107 18008 36512 29263 29263 1 9606 Homo sapiens -0.049703367555139266 NAEFLTCNIPTSNASNNMVTTEK Oxidation (M) 2571.1581 0.1581165 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;A0A3B3ISX1;A0A3B3ITG9;A0A7P0TA14;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 1 0 7 0 1 53.995 54.062 4 9.9056E-05 15385 20230619_1887_Aki_TMTPro18x_K_F7 74.062 65.462 15458 13114 15507 17819 19009 18764 18495 19343 21461 18171 18039 18749 18687 18959 19978 20038 21785 19729 14297 12043 15813 17616 19438 18918 18769 19688 21556 18452 18709 19016 19138 19592 20391 20106 20812 18749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30695000 19250 1718;4020 18009 36513 29264 29264 1122 1 9606 Homo sapiens -0.06461623448876708 NAENAIEALK Unmodified 1071.556 0.55603811 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9;Q8N3X5;O14983-2;O14983;Q7Z675;Q7Z6E5;H3BVB2 ATP2A2;ATP2A1;DKFZp779O2152;DKFZp779G2251 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Calcium-transporting ATPase yes no 0 0 0 4.33 0.471 2 1 52.819 52.859 2;3 2.5715E-09 14976 20230619_1885_Aki_TMTPro18x_K_F5 197.21 121.47 260300 204510 248420 274140 246080 250510 266570 260240 310690 300780 306150 286270 357620 272630 294560 325320 309810 301390 240540 187820 253420 270790 256240 255380 269000 266360 313920 301400 316400 290910 360120 284600 301640 324680 296210 286550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 544820000 19251 1076 18010 36514;36515;36516 29265;29266;29267 29266 3 9606 Homo sapiens 0.02312233746692982 NAEQAATQLK Unmodified 1072.5513 0.55128709 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 0 5 0 1 42.379 42.462 2 2.0149E-09 10540 20230619_1885_Aki_TMTPro18x_K_F5 201.84 108.68 57472 37436 48817 46323 40256 46246 52658 48130 69195 65979 78071 80802 85857 72924 59576 66674 106770 80212 53009 34381 50168 46070 42887 46816 52890 49539 69880 66193 80000 81050 86174 75164 63668 67852 101520 76139 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28584000 19252 380 18011 36517 29268 29268 1 9606 Homo sapiens 0.017913496039454913 NAEQNGPVDGQGDNPGPQAAEQGTDTAVPSDSDK Unmodified 3365.4516 0.45159222 3544 P34932;B4DH02;V9HW33;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8;B0AZS1;B0AZT0;B4DN48 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 0 0 1 0 1 45.135 45.135 4 1.0397E-11 12349 20230619_1880_Aki_TMTPro18x_K_F1 120.37 118.88 13813 8768.4 10684 10470 9368.5 13144 11245 12424 13630 14443 17404 16658 17151 14195 14129 17687 14670 16488 12731 8050.9 11095 10472 9920 13065 11312 12791 13899 14554 17658 16735 17363 14906 14472 17641 14044 15666 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195370000 19253 3544 18012 36518 29269 29269 1 9606 Homo sapiens -0.13651551122211458 NAESNAELK Unmodified 974.46689 0.46688876 188 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;P18621-3;J3KRB3;A0A087WWH0;J3QS96;J3QLC8;A0A0A0MRF8;P18621-2 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 yes no 0 0 0 2.5 0.5 2 2 37.588 37.645 2;3 4.4566E-05 8747 20230619_1881_Aki_TMTPro18x_K_F2 128.91 101.16 164520 77957 202560 208810 284240 331170 205660 301850 253950 170100 272100 294270 225040 239710 258210 115100 311630 274300 152020 72559 203860 201440 286800 324510 213720 306530 256330 182810 276470 291040 233110 242410 264090 127100 297390 258980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 314520000 19254 188 18013 36519;36520;36521;36522 29270;29271 29270 2 9606 Homo sapiens -0.021366012127941758 NAFMMLIHADQDR Unmodified 1560.7177 0.71771726 3646 P53618;E9PP73 COPB1 Coatomer subunit beta yes no 0 0 0 7.5 0.5 1 1 57.91 57.959 3 3.516E-07 16975 20230619_1887_Aki_TMTPro18x_K_F7 126.63 110.38 105390 85327 99035 103860 93662 118980 107370 96782 134900 109040 106230 100730 116930 89232 115330 114520 100380 115640 97395 78278 101100 103550 98261 118630 108290 100770 134670 109370 110790 102270 118850 93828 116480 114750 96298 109770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45023000 19255 3646 18014 36523;36524 29272;29273 29272 2 9606 Homo sapiens -0.040212885541450305 NAFVTGIAR Unmodified 947.51886 0.51886475 4154 Q7L576;X5D2F4;A0A087WVZ5;A0A0G2JQT1;A0A0G2JR96;E7EVJ5;Q96F07;Q96F07-2;H7C229;B7Z8N7;A0A8V8TNU3;B7Z3H2;B7Z217;E7EW33;A0A087WU52;A0A087WWL1;A0A0G2JRV9;A0A087WVE1;A0A087WTQ3;A0A087WWZ1;A0A0G2JRX2;A0A0G2JRF5;A0A087WWY5;A0A087WV63 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 2.5 0.5 1 1 46.021 46.098 2 0.013666 12279 20230619_1882_Aki_TMTPro18x_K_F3 89.886 68.379 130330 115550 114070 116030 115790 128120 125470 133640 162070 88516 92594 77982 85633 75541 116320 87561 92326 82011 120460 105790 117260 117390 120500 128810 127060 134910 160010 91689 97935 79662 89108 78632 116260 87590 88498 77991 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194730000 19256 4154 18015 36525;36526 29274 29274 1 9606 Homo sapiens 0.04300606991614586 NAFYIGSYQQCINEAQR Unmodified 2060.9374 0.9374231 3188 Q53HJ6;M0QXB4;O14579;O14579-2;O14579-3;M0R061 COPE Coatomer subunit epsilon yes no 0 0 0 8 0 1 55.288 55.35 3 6.2057E-10 15869 20230619_1888_Aki_TMTPro18x_K_F8 142.39 128.56 57863 45997 50601 64602 55269 67229 75355 66306 67538 68758 63520 61490 67250 58977 70273 83483 69467 74631 53440 42265 52187 63711 57604 67727 74532 67896 69107 69134 65543 62716 68677 62203 71438 82961 66509 70960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121440000 19257 3188 18016 36527 29275 29275 1 9606 Homo sapiens -0.05060811132671006 NAGAVIGK Unmodified 728.41809 0.41808807 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;A0A994J795;S4R457 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 4.5 3.04 1 1 1 1 41.913 41.95 2 0.0015417 10919 20230619_1880_Aki_TMTPro18x_K_F1 140.98 80.626 600350 298680 731600 715170 1030100 1034600 761120 994690 867910 617910 1007000 1040300 821890 877590 921210 360000 1023500 886900 554780 277280 736440 691470 1038100 1020200 787210 1008100 882460 657700 1018900 1030600 850530 882940 937370 401690 977300 837300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 679820000 19258 1865 18017 36528;36529;36530;36531 29276;29277 29276 2 9606 Homo sapiens 0.043015750087647575 NAGFTPQER Unmodified 1018.4832 0.48320752 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 0 4 1.41 1 1 1 1 1 35.074 35.135 2 9.3903E-05 7532 20230619_1883_Aki_TMTPro18x_K_F4 156.62 136.77 311260 239520 253240 273680 322110 324120 303890 317580 432800 334720 389640 366000 386280 359490 319820 386960 471890 375280 287260 219650 263180 274310 328780 323910 311400 325270 431550 338590 401360 370100 391590 372310 335100 387620 449360 356920 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1305600000 19259 3515 18018 36532;36533;36534;36535;36536 29278;29279;29280;29281 29280 4 9606 Homo sapiens -0.025294752560398592 NAGNCLSPAVIVGLLK Unmodified 1624.8971 0.89706184 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 5 0.632 1 3 1 64.272 64.31 2;3 7.9597E-19 19836 20230619_1885_Aki_TMTPro18x_K_F5 248.32 190.83 127150 105600 113660 110060 100360 121700 95478 105640 107340 134670 161610 188280 141930 157260 173320 156090 176800 222740 117480 96727 116340 111000 105310 121850 97069 109820 110920 136120 162650 187530 147200 163080 175800 160650 169450 210680 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1240500000 19260 1334 18019 36537;36538;36539;36540;36541 29282;29283;29284 29282 3 9606 Homo sapiens 0.1096091900542433 NAGNEQDLGIQYK Unmodified 1448.6896 0.68957148 1411 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;E5RIB1;E5RJ41 CTNNA1 Catenin alpha-1 yes no 0 0 0 4 0 1 47.577 47.617 2 3.723E-12 12895 20230619_1883_Aki_TMTPro18x_K_F4 162.38 104.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19261 1411 18020 36542 29285 29285 1 9606 Homo sapiens -0.016825719382495663 NAGPQIDR Unmodified 869.43553 0.43552905 1056 A0A0S2A4E4;A0A0M4G3H8;P35573-2;P35573-3;P35573;G1UI17 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes no 0 0 0 3 0 1 31.438 31.524 2 0.0045058 6195 20230619_1882_Aki_TMTPro18x_K_F3 116.25 71.169 13514 10112 19350 13804 24981 25970 16961 22103 24421 18115 28387 26905 21100 24473 23638 10414 25946 28510 12534 9290.5 19216 13802 25274 25245 17822 22715 24580 18804 28609 26814 21927 24576 24045 11752 24821 26878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7920000 19262 1056 18021 36543 29286 29286 1 9606 Homo sapiens -0.004411294562373769 NAGQAVTIVAQYRPEEYSR Unmodified 2151.0709 0.070880117 990 A0A0C4DFT3;A0A590UKA8;A0A590UJ18;Q12959-5;Q12959-3;A0A590UJD9;A0A590UJ68;Q12959-6;A0A590UJS9;A0A590UJC5;Q12959-7;Q12959-2;Q12959;A0A590UJR5;A0A590UJ08;Q12959-4;Q12959-9;A0A590UJ29;Q12959-8;C9JUA9;A0A590UJR4;A0A590UJX2;A0A590UJ64;E7EQD7;A0A590UK81;Q59FC4;A0A590UK48;B4DF78;A0A590UJ81;A0A590UJ25;A0A590UJL2;A0A590UK70;A0A590UK02 DLG1 Disks large homolog 1 yes no 0 0 1 8 0 1 50.034 50.11 3 9.4017E-20 13594 20230619_1888_Aki_TMTPro18x_K_F8 186.97 167.58 28555 25292 34881 32456 32267 38950 31898 37528 46431 35451 33528 32188 36818 31435 39525 40830 40175 41204 26466 23207 34853 32280 33750 38847 32652 38357 45945 35866 35151 32822 37611 32954 40187 40895 38440 39128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30103000 19263 990 18022 36544 29287 29287 1 9606 Homo sapiens 0.041387512445908214 NAGVEGSLIVEK Unmodified 1214.6507 0.65066678 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 4.69 2.01 1 1 2 2 2 2 2 1 50.788 50.846 2;3 2.5369000000000003E-31 14081 20230619_1885_Aki_TMTPro18x_K_F5 280.56 204.34 822160 744180 753750 734250 812460 884920 904660 835450 1061800 908110 997360 847960 1018000 890580 896380 1064800 989010 990280 760210 681150 772190 744910 841950 882750 911440 858870 1069700 912630 1026100 865970 1032800 926350 919700 1062600 945390 941360 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 5966399999.999999 19264 272 18023 36545;36546;36547;36548;36549;36550;36551;36552;36553;36554;36555;36556;36557 29288;29289;29290;29291;29292;29293 29290 6 9606 Homo sapiens 0.05192747498040262 NAIANASTLAEVER Unmodified 1457.7474 0.74742071 3422 Q53G61;Q53G21;P09661;H0YLR3;H0YMA0 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 0 4.33 0.471 2 1 49.461 49.51 2;3 2.6688E-46 13735 20230619_1883_Aki_TMTPro18x_K_F4 305.2 263.63 160110 135400 142310 130840 134080 150760 151320 153790 186950 157310 165510 149930 176740 155020 151860 188370 166070 167470 147950 123940 145850 132920 140510 151090 152700 156960 187500 158660 171190 152850 178890 161460 155850 187490 158760 159280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 607530000 19265 3422 18024 36558;36559;36560 29294;29295 29294 2 9606 Homo sapiens 0.03685689987173646 NAIDDGCVVPGAGAVEVAMAEALIK Unmodified 2469.2243 0.22434557 765 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 4.75 1.56 1 1 1 2 2 1 66.071 66.102 3;4 1.2764E-26 20778 20230619_1886_Aki_TMTPro18x_K_F6 178.69 161.61 174920 153350 178090 185830 141870 164230 173160 177060 185480 209490 210670 186430 221380 198000 187070 247090 218210 233760 161840 140630 180140 184760 151100 168020 173290 180880 189380 209250 215250 190870 224050 206430 192890 246590 208590 222110 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1174200000 19266 765 18025 36561;36562;36563;36564;36565;36566;36567;36568 29296;29297;29298 29297 3 9606 Homo sapiens 0.048502371837912506 NAIEHPVR Unmodified 934.49846 0.49846366 9 B3KSG9;A0A024QYR8;Q99805 TM9SF2 Transmembrane 9 superfamily member 2 yes no 0 0 0 4.5 1.12 1 1 1 1 27.98 28.055 3 0.0061372 4647 20230619_1883_Aki_TMTPro18x_K_F4 87.476 70.7 27640 20448 26662 29287 29175 30198 29727 34366 32412 33929 44980 42281 36756 37331 45980 21915 81328 48208 25535 18798 27216 28859 30107 30558 30051 34798 33353 34553 45198 42347 38297 37869 48388 23823 77243 45631 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68579000 19267 9 18026 36569;36570;36571;36572 29299;29300 29299 2 9606 Homo sapiens 0.0285943633180068 NAIMFGK Oxidation (M) 795.39491 0.39490979 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 1 0 2 0 1 46.78 46.856 2 0.059325 12956 20230619_1881_Aki_TMTPro18x_K_F2 73.637 25.291 273980 201920 239140 265940 312220 322960 319170 298730 406880 269620 292200 260820 270910 232320 255600 279130 297550 261470 252920 185460 247090 263990 318750 321700 323900 306100 404510 274100 304030 264390 276560 243040 262610 278720 284040 248660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147210000 19268 4746 18027 36573 29301 29301 2891 1 9606 Homo sapiens -0.010971871002084299 NAIMFGK Unmodified 779.4 0.39999517 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 2.5 0.5 1 1 51.005 51.063 2 0.017711 14573 20230619_1882_Aki_TMTPro18x_K_F3 108.24 68.696 482580 389810 404920 434130 438570 496320 462380 453210 558640 479080 492950 443570 517760 402920 439200 523370 544950 451900 445600 357310 418470 435700 453960 496270 467770 466670 560890 481930 509530 450840 523790 423440 454250 519790 519740 430310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 307840000 19269 4746 18027 36574;36575 29302;29303 29303 2 9606 Homo sapiens 0.0014711676241176974 NAIQEIQR Unmodified 970.51959 0.51959303 283 Q53S54;A0A024R475;Q13618-2;Q13618;A0A087X1R9;H7C1L6 CUL3 Cullin-3 yes no 0 0 0 4.5 0.5 1 1 38.419 38.486 2 0.023747 8937 20230619_1883_Aki_TMTPro18x_K_F4 85.666 25.077 42891 34004 37445 42054 45507 54548 51150 53479 66666 50262 60687 59768 60273 54472 55030 63019 73421 64378 39611 31202 38653 41970 46853 54168 51711 54605 66727 51294 62515 60098 61326 56796 57104 63248 70009 61165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111100000 19270 283 18028 36576;36577 29304 29304 1 9606 Homo sapiens 0.033154016406683695 NAITSSYSSTR Unmodified 1185.5626 0.56258006 1992 Q96HA1-2;A8CG34-2;Q96HA1-3;A8CG34;Q96HA1;C9JFL1;B4DET5 POM121;POM121C Nuclear envelope pore membrane protein POM 121;Nuclear envelope pore membrane protein POM 121C yes no 0 0 0 8 0 1 36.738 36.725 2 9.0308E-05 8145 20230619_1888_Aki_TMTPro18x_K_F8 138.76 118.98 22247 15086 20504 18983 22840 28584 22672 22821 29555 20869 24052 24385 26223 23247 18732 27867 31377 23380 20536 13854 21003 18976 23578 28031 23081 23654 29473 21329 25022 24573 26362 24246 19924 27654 29844 22284 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20042000 19271 1992 18029 36578 29305 29305 1 9606 Homo sapiens -0.022778730925892887 NALANPLYCPDYR Unmodified 1565.7297 0.72966216 3492 P22695;H3BRG4;H3BSJ9;H3BP04 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 7.67 0.471 1 2 52.8 52.874 2;3 1.5473E-07 14791 20230619_1888_Aki_TMTPro18x_K_F8 185.18 160.39 93297 83305 93628 110160 91192 101790 114420 120670 137450 105650 95997 91633 105080 93008 110800 103990 87259 93828 86321 76461 95162 108930 95563 103970 114710 121560 137000 107200 100850 93736 107240 96461 111230 103790 83762 89202 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 240770000 19272 3492 18030 36579;36580;36581 29306;29307 29307 2 9606 Homo sapiens -0.030573485393460942 NALANQSDCVLHR Unmodified 1496.7154 0.71540908 679 B3KMP2;A8KAQ7;A5D8X2;A0A024RBJ3;Q9UJX3-2;Q9UJX3;Q2M2R1;Q4KMX6;H0YIW2 ANAPC7 Anaphase-promoting complex subunit 7 yes no 0 0 0 6 0 1 38.474 38.556 3 1.978E-06 8941 20230619_1886_Aki_TMTPro18x_K_F6 138.15 116.6 99782 97609 106830 98265 143320 96818 121920 125590 122060 107790 131660 103570 125430 98955 120120 135760 141350 104310 92432 89333 108350 99293 144870 98894 124210 125820 124700 109740 134180 105390 127920 104160 123490 134040 134780 99541 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71617000 19273 679 18031 36582 29308 29308 1 9606 Homo sapiens -0.013080009676286863 NALDLLLPK Unmodified 995.60153 0.60153174 914 P30566;A0A7P0T9A7;A0A7P0Z472;A0A096LNY6;X5D8S6;A0A1B0GTJ7;A0A1B0GWJ0;Q71UA4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;X5D2Z4;X5DP48;P30566-2;A8K4X6;A0A096LP92;A0A096LNY4 ADSL Adenylosuccinate lyase yes no 0 0 0 1.5 0.5 1 1 62.824 62.828 2 0.00034924 19885 20230619_1881_Aki_TMTPro18x_K_F2 138.98 84.364 130950 100410 115520 130430 117190 111770 136310 133090 140820 152220 132650 140490 159500 127180 128360 183830 162270 180540 120920 92198 118730 129020 121980 114980 136480 135030 143020 152410 137700 142740 160440 134690 133260 183450 155060 171440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99590000 19274 914 18032 36583;36584 29309 29309 1 9606 Homo sapiens 0.1035550399975591 NALDPMSVLLAR Unmodified 1298.7017 0.70165649 347 B7Z7Q6;E9PNF7;A0A024R5L0;P42785;P42785-2;B3KR26;A0A7P0Z451 PRCP Lysosomal Pro-X carboxypeptidase yes no 0 0 0 2 0 1 63.184 63.193 2 2.9326E-09 20045 20230619_1881_Aki_TMTPro18x_K_F2 177.57 134.7 148740 147340 143630 167080 201320 237670 267200 283340 326330 196190 184370 188790 184910 160800 184940 216590 209650 230730 137680 134980 147470 168100 206480 235930 267160 283760 323000 202880 195930 191160 188840 169770 189610 217440 200500 218920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51921000 19275 347 18033 36585 29310;29311 29310 2 9606 Homo sapiens 0.0642537327125865 NALESYAFNMK Unmodified 1286.5965 0.59652272 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNX1;B4E1T6 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B no no 0 0 0 4.5 3.5 1 1 58.93 58.951 3 2.7854E-06 17350 20230619_1888_Aki_TMTPro18x_K_F8 125.97 115.06 321190 317250 354400 430520 336440 441800 436510 460840 518680 452050 415990 399260 504400 428080 423140 565050 492310 493260 297640 291180 357600 425470 354090 446030 436830 469160 519610 455900 435380 409080 508250 447840 436310 561180 470370 469260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 627520000 19276 1031 18034 36586;36587 29312;29313 29313 2 9606 Homo sapiens -0.03531167925189038 NALESYAFNMK Oxidation (M) 1302.5914 0.59143734 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNX1;B4E1T6 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B no no 0 1 0 8 0 1 53.478 53.55 3 0.00060936 15106 20230619_1888_Aki_TMTPro18x_K_F8 92.866 82.222 179750 169790 190900 214600 226690 211020 212470 219290 232190 260430 262560 234940 285050 244870 229240 287570 285560 309680 166450 155740 193630 212980 231900 213970 215740 224540 236860 260190 268710 240150 287600 254600 237530 289340 272850 293820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 487090000 19277 1031 18034 36588 29314 29314 601 1 9606 Homo sapiens -0.047754717878206066 NALQELQQIIITPIK Unmodified 1721.0087 0.0087207779 101 Q8IXP7;Q66K25;M0QZ22;A0A024R0N7;Q5PRF9 SAMD4B Protein Smaug homolog 2 yes no 0 0 0 3 0 1 65.486 65.52 3 0.00030946 20753 20230619_1882_Aki_TMTPro18x_K_F3 90.367 76.337 7968 7601.3 7189.7 8001.2 6214.3 8142.4 7994.1 8179.4 10504 7285.6 7678.1 8283.6 8132.5 7939.7 9028.6 8366.2 9038.8 8573.6 7369.5 6960 7360.3 8052.9 6595.9 8223.5 8033.9 8331.2 10434 7448.5 8037.7 8352.6 8336.9 8218.8 9161.6 8415.6 8644.9 8142.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8953200 19278 101 18035 36589 29315 29315 1 9606 Homo sapiens 0.1770567663422753 NALSSLWGK Unmodified 974.51853 0.5185304 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;A0A7I2V3I2;H0YBP5;A0A7I2V4G3;E5RGA2;A0A7I2V5P9;E5RHS5 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 0 4.5 0.5 1 1 59.331 59.359 2 0.00037052 18091 20230619_1883_Aki_TMTPro18x_K_F4 153.05 105.96 313800 268880 299770 286980 252490 331890 294840 303370 388470 358820 290560 321760 387770 312700 330840 377630 388710 356120 290140 246310 304940 289080 267760 331520 297780 313300 386740 358680 307180 327890 389970 326390 340850 377120 371130 338590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 314820000 19279 1659 18036 36590;36591 29316;29317 29316 2 9606 Homo sapiens 0.030251872717599326 NALTTLAGPLTPPVK Unmodified 1491.8661 0.86607929 991 B3KTK5;Q53GS8;H0Y3X6;B3KM78;A0A0C4DFX9;Q9H3P2;B3KSP0;C9JEM7;H7C2C7;C9JHL4;H7C0W2 NELFA;WHSC2 Negative elongation factor A yes no 0 0 0 4 0 1 61.636 61.639 3 2.5626E-05 18988 20230619_1883_Aki_TMTPro18x_K_F4 100.56 84.668 48579 43454 43362 48548 41858 54704 53037 48289 54739 54420 53708 50304 52829 50591 56687 55814 54256 57656 44906 39817 44507 48694 43969 54694 52871 49953 55631 54560 55112 51275 54164 52438 57438 56116 51959 54730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73622000 19280 991 18037 36592 29318 29318 1 9606 Homo sapiens 0.139820889628254 NALVSHLDGTTPVCEDIGR Unmodified 2052.9899 0.9898526 3533 P31930;B4DUL5 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 4.5 0.5 1 1 50.082 50.137 3 3.4981E-49 13788 20230619_1885_Aki_TMTPro18x_K_F5 269.49 253 185230 174580 174850 198880 172850 197860 212070 217040 248530 177460 174690 198560 203660 167970 164740 189500 183570 217170 171360 159970 178630 198890 180860 200610 212640 219370 247980 182200 184120 199530 205100 175480 169380 191560 175690 205860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2853600000 19281 3533 18038 36593;36594 29319;29320 29320 2 9606 Homo sapiens 0.005477272102325514 NAMGSLASQATK Unmodified 1177.5761 0.57612163 3655 P55036;Q5VWC4;H0Y3Y9;H0Y561 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes no 0 0 0 2 0 1 45.54 45.622 2 3.0332E-25 12403 20230619_1881_Aki_TMTPro18x_K_F2 213.63 162.29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19282 3655 18039 36595 29321 29321 1 9606 Homo sapiens -0.005563385850109626 NAMGSLASQATK Oxidation (M) 1193.571 0.57103625 3655 P55036;Q5VWC4;H0Y3Y9;H0Y561 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes no 0 1 0 7.67 0.471 1 2 38.404 38.416 2;3 9.5259E-05 8624 20230619_1887_Aki_TMTPro18x_K_F7 107.97 80.637 86699 63277 73149 85441 98528 96467 88705 98179 114330 96096 114890 97368 106830 94343 94258 106400 105620 97703 80010 58137 75871 84588 100050 96764 90815 100090 114980 97308 117360 98783 108710 98026 96762 106230 100890 92920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 94363000 19283 3655 18039 36596;36597;36598 29322;29323;29324 29322 2354 3 9606 Homo sapiens -0.018006424476197935 NANAEPAVQR Unmodified 1068.5312 0.53122035 916;2266 A0A096LP69;B2R932;P14209-3;P14209 CD99 CD99 antigen no no 0 0 0 2.5 0.5 1 1 29.694 29.777 2 0.0013588 5477 20230619_1882_Aki_TMTPro18x_K_F3 108.43 85.693 16272 8253.3 16918 15576 34786 35126 19991 23780 24125 20112 29396 35247 25299 27132 32909 13573 33000 29571 15016 7630 17385 15363 34303 33765 21154 24957 24546 20994 29789 34771 26346 27524 33223 14823 31550 27930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33499000 19284 916;2266 18040 36599;36600 29325;29326 29326 2 9606 Homo sapiens -0.0003040133599370165 NANAVMEYEK Unmodified 1167.523 0.52302343 1609;2515 B4DKK3;Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2;K7EIH8;K7ER44;K7EK03;K7EPP7;K7ESP1;K7EJV7;K7EN19;K7EJL5 DNAJC7 DnaJ homolog subfamily C member 7 no no 0 0 0 4 0 1 46.04 46.084 3 0.00024103 12203 20230619_1883_Aki_TMTPro18x_K_F4 116.23 102.27 160020 133750 155440 162440 172820 215810 198130 167050 244140 147450 160660 144080 156130 149470 155420 143260 162770 141370 147950 122680 158650 162350 179080 212990 199550 173580 242440 150260 168480 146670 159610 153600 158380 144040 155520 134370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53636000 19285 2515;1609 18041 36601 29327 29327 1 9606 Homo sapiens -0.05403716367641209 NANCSLPSCQK Unmodified 1277.5493 0.54925495 4306;1596 A0A669KB12;Q09472;B5A248;B5A224;Q92793-2;Q92793;O60424 EP300;CREBBP;CBP Histone acetyltransferase p300;CREB-binding protein no no 0 0 0 8 0 1 38.626 38.613 3 0.0016818 8919 20230619_1888_Aki_TMTPro18x_K_F8 71.555 57.649 37397 19966 56590 49651 88352 74069 53268 84451 54248 30397 44017 48780 30382 38902 62537 21831 52776 35992 34652 18542 56283 47997 88076 73260 55874 83994 54750 34161 45147 48345 33057 39495 62251 23152 50474 34097 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14483000 19286 1596;4306 18042 36602 29328 29328 1 9606 Homo sapiens -0.07841770467825881 NANGDPVCNACGLYYK Unmodified 1814.7716 0.77160333 3497;1802 P23771;P23771-2;P23769-2;A0A8Q3SJG7;A0A8Q3WLD0;P23769 GATA3;GATA2 Trans-acting T-cell-specific transcription factor GATA-3;Endothelial transcription factor GATA-2 no no 0 0 0 7 0 1 50.48 50.561 3 0.033778 13835 20230619_1887_Aki_TMTPro18x_K_F7 55.213 43.773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19287 3497;1802 18043 36603 29329 29329 1 9606 Homo sapiens -0.1031916091308176 NAPAIIFIDELDAIAPK Unmodified 1809.9877 0.98765098 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1;A0A7P0TAY0 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 0 5.5 1.5 1 1 2 2 1 1 66.579 66.612 3;4 5.404E-14 20718 20230619_1887_Aki_TMTPro18x_K_F7 165.02 138.35 120410 97740 106790 116820 110350 134410 132760 128150 150050 125850 143550 139680 145370 135970 147190 160690 142040 151350 111230 89648 109760 116650 115080 134410 133080 131310 151510 127800 147670 141150 148470 141600 149440 160540 136020 143820 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 988490000 19288 3656 18044 36604;36605;36606;36607;36608;36609;36610;36611 29330;29331;29332;29333 29332 4 9606 Homo sapiens 0.11505666534708325 NAPNDASYDAVR Unmodified 1291.5793 0.57929275 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 2.5 0.5 1 1 36.787 36.843 2 8.9756E-24 8306 20230619_1882_Aki_TMTPro18x_K_F3 255.13 213.94 50812 41007 40958 47336 56666 60229 49394 48893 77086 64773 74774 71960 75249 64898 57252 68965 80946 66104 46905 37600 42695 47445 57485 59684 51064 51154 76834 64882 76790 72488 75956 67377 59899 69057 77117 62870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151240000 19289 2863 18045 36612;36613 29334 29334 1 9606 Homo sapiens -0.054833722066405244 NAPSRPPSLPTPR Unmodified 1388.7524 0.75244651 4760 Q9Y6X9;Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 yes no 0 0 1 4 0 1 37.423 37.466 3 0.0014828 8546 20230619_1883_Aki_TMTPro18x_K_F4 84.15 52.511 148300 120490 146210 134040 161590 167250 162580 152390 193230 161680 176710 170420 169020 158760 156000 164780 185520 171240 137110 110440 148840 134760 166600 166330 164810 156960 194360 163270 181700 172230 172260 164410 160530 165850 177120 162630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52592000 19290 4760 18046 36614 29335;29336 29335 2 9606 Homo sapiens 0.07362038640440005 NAPTPQEFR Unmodified 1058.5145 0.51450765 806;3082 P13591-1;A0A087WTF6;P13591;P13591-3;P13591-4;A0A087WV75;A0A087WWD4;A0A087WX77;A0A087WTE4;P13591-5;P13591-6;O00557;H7BYX6 NCAM1 Neural cell adhesion molecule 1 no no 0 0 0 4.5 0.5 1 1 39.045 39.112 2 0.00083667 9124 20230619_1885_Aki_TMTPro18x_K_F5 121.64 97.484 95770 74971 92990 143060 99253 120590 120600 129710 169290 128300 149670 154250 143840 140760 134670 162820 161040 180490 88511 69173 95119 138400 103340 123720 121840 131890 168730 130620 154250 155010 146720 146730 138720 164170 153960 171170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 194240000 19291 806;3082 18047 36615;36616 29337;29338 29338 2 9606 Homo sapiens -0.012409022219571852 NAPWTLTPEFLAEHR Unmodified 1780.8897 0.88966827 2732 C9J050;C9JEJ2;P49585;D3DXB2;B4E322;H7C1T3;C9J2E1;H7BZN1 PCYT1A;hCG_2002711 Choline-phosphate cytidylyltransferase A yes no 0 0 0 8 0 1 59.325 59.367 3 1.2067E-07 17510 20230619_1888_Aki_TMTPro18x_K_F8 127.18 107.89 67391 56862 61104 71939 68812 78361 70282 74475 86750 75430 70967 71312 76994 62017 78022 79738 72668 74323 62279 52177 62777 71480 70964 78653 71290 76368 86815 76077 73837 72276 78414 65230 79035 79542 69592 70644 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51502000 19292 2732 18048 36617 29339 29339 1 9606 Homo sapiens 0.03045902729354566 NAQAIEDMVGYAQETQHEK Unmodified 2160.9746 0.97459647 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 4 0.816 1 1 1 57.171 57.204 3 1.1598E-24 16762 20230619_1885_Aki_TMTPro18x_K_F5 201.22 185.8 90202 66300 78950 89761 71635 88279 96455 92493 99121 116510 102160 105250 115790 97096 97194 118680 120050 124810 83268 60914 81113 88686 75735 89442 95897 94851 101060 116080 105280 107050 116880 101610 100540 119190 114670 118460 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 246620000 19293 832 18049 36618;36619;36620 29340;29341 29341 2 9606 Homo sapiens -0.05945184377605983 NAQAQQEFK Unmodified 1062.5094 0.50942227 1609 Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2;K7EIH8;K7ER44;K7EK03;K7EPP7;K7ESP1;K7EJV7;K7EN19;K7EJL5 DNAJC7 DnaJ homolog subfamily C member 7 yes no 0 0 0 4 0 2 38.895 38.937 3 2.2061E-11 9093 20230619_1883_Aki_TMTPro18x_K_F4 177.7 153.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19294 1609 18050 36621;36622 29342;29343 29342 2 9606 Homo sapiens -0.019332060845727028 NAQLNIELEAAHH Unmodified 1458.7215 0.72154031 426 P43490;A0A024R718;A0A7P0T9I9;A0A7P0T895;A0A7P0T973;A0A7P0T931;A0A7P0T862;A0A7P0Z437;Q658Z1 NAMPT;PBEF1;DKFZp666B131 Nicotinamide phosphoribosyltransferase yes no 0 0 0 3 0 1 44.259 44.332 3 6.8642E-08 11541 20230619_1882_Aki_TMTPro18x_K_F3 124.39 110.48 52794 50152 64274 60532 74566 64487 72260 67400 63300 62667 67865 57795 56175 49016 86217 53207 65075 55920 48954 45979 64450 60356 76363 65030 72728 68539 65184 63421 68910 58617 59114 51079 85788 53666 62404 53118 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121760000 19295 426 18051 36623 29344 29344 1 9606 Homo sapiens 0.01052840535589894 NAQMAQSPILLLGGAASTLLQNR Oxidation (M) 2382.2689 0.268928 1903 A1L0T0;M0R026;Q59GP4;E9PJS0;M0R1B5;E9PL44 ILVBL Acetolactate synthase-like protein yes no 0 1 0 6.5 0.5 1 1 64.711 64.746 3 1.1105E-34 20288 20230619_1886_Aki_TMTPro18x_K_F6 210.29 201.47 9117.5 8986.6 10716 10649 10720 9851.4 10483 12447 12714 11153 12587 14263 12064 13790 11487 12766 13351 14864 8453.8 8236.4 10749 10614 11111 10088 10662 12498 12817 11436 12909 14318 12328 14171 11801 12961 12766 14090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150670000 19296 1903 18052 36624;36625 29345 29345 1221 1 9606 Homo sapiens 0.13308429112157683 NAQMAQSPILLLGGAASTLLQNR Unmodified 2366.274 0.27401338 1903 A1L0T0;M0R026;Q59GP4;E9PJS0;M0R1B5;E9PL44 ILVBL Acetolactate synthase-like protein yes no 0 0 0 8 0 1 65.54 65.559 3 3.0684E-26 20182 20230619_1888_Aki_TMTPro18x_K_F8 183.09 173.81 6127.4 3325.4 4259.3 5248.3 6316.5 5349 4774 6662 6053.7 7838.1 8587 7296.3 7204.6 6622.6 7302.1 7916.1 8109.3 8375.7 5639.6 3065.3 4515.7 5141.7 6351.5 5433.2 4949.3 6739.2 6203.3 7836 8621.3 7413.2 7404.1 6921.6 7471.8 7958.2 7752.9 7949.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32115000 19297 1903 18052 36626 29346 29346 1 9606 Homo sapiens 0.14552732974743776 NAQQVHFR Unmodified 998.50461 0.50461167 3079 H3BUJ7;Q66K89 E4F1 Transcription factor E4F1 yes no 0 0 0 8 0 1 30.717 30.728 3 3.25E-09 5897 20230619_1888_Aki_TMTPro18x_K_F8 142.64 66.79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19298 3079 18053 36627 29347 29347 1 9606 Homo sapiens 0.005299545633306479 NAQSNALQER Unmodified 1129.5476 0.54759869 3435 Q59EZ3;P11717;A0A7I2V657 IGF2R Cation-independent mannose-6-phosphate receptor yes no 0 0 0 3 0.816 1 1 1 30.864 30.936 2 1.5206E-07 5954 20230619_1882_Aki_TMTPro18x_K_F3 192.12 159.22 23525 11104 27291 30649 49675 56709 33420 41870 46249 23908 42716 48341 38960 41288 41249 16262 39795 36997 21724 10343 27767 29626 49421 54967 35046 43288 46162 25920 43870 47682 40037 41472 41681 18003 38070 34931 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33267000 19299 3435 18054 36628;36629;36630 29348;29349 29348 2 9606 Homo sapiens -0.011993201699169731 NASCYFDIEWR Unmodified 1459.619 0.61904908 1426 A0A384MEG1;Q16658;B3KTA3;B3KTM9;C9JFC0;A0A0A0MSB2;C9JPH9 FSCN1 Fascin yes no 0 0 0 6.2 0.748 1 2 2 60.5 60.551 2;3 7.9245E-12 18011 20230619_1887_Aki_TMTPro18x_K_F7 199.17 168.47 568790 519890 565800 532800 445030 510350 561570 571030 599230 770020 701460 689580 746740 711840 725120 767470 716860 745330 526310 475980 572990 537250 475050 519460 561010 584400 613270 764820 716920 704310 760080 736230 737520 769100 686160 708050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1214100000 19300 1426 18055 36631;36632;36633;36634;36635 29350;29351;29352 29352 3 9606 Homo sapiens -0.09237568527555595 NASDMPETITSR Oxidation (M) 1336.5929 0.59289391 795 A0A075B6F6;A0A0S2Z6F0;A0A3B3IT72;A0A0S2Z5V7;A0A3B3IUB5;Q8TCT9-5;Q8TCT9;Q8TCT9-4;Q8TCT9-2;A0A0C4DGU3 HM13 Minor histocompatibility antigen H13 yes no 0 1 0 2 0 1 34.319 34.376 2 0.0002386 7418 20230619_1881_Aki_TMTPro18x_K_F2 112.64 96.267 43529 40511 39347 49582 60021 61402 60404 61671 74052 56664 64844 65915 68540 54078 63066 68020 69317 69836 40253 37148 40696 49471 60705 61207 61271 62837 74246 57843 67132 66119 69555 56926 64598 68218 66265 66310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48747000 19301 795 18056 36636 29353 29353 477 1 9606 Homo sapiens -0.06193882489696989 NASDMPETITSR Unmodified 1320.598 0.59797928 795 A0A075B6F6;A0A0S2Z6F0;A0A3B3IT72;A0A0S2Z5V7;A0A3B3IUB5;Q8TCT9-5;Q8TCT9;Q8TCT9-4;Q8TCT9-2;A0A0C4DGU3 HM13 Minor histocompatibility antigen H13 yes no 0 0 0 3 0 1 41.321 41.38 2 3.4835E-09 10179 20230619_1882_Aki_TMTPro18x_K_F3 174.42 146.02 143350 116960 122000 137860 143590 170750 165180 161420 213990 170810 183290 189510 225780 174260 173730 218050 208010 204240 132380 107260 126170 137940 148240 169930 166720 165790 213900 172810 191350 191090 226530 182620 179700 217520 198660 194150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265210000 19302 795 18056 36637 29354 29354 1 9606 Homo sapiens -0.04949578627088158 NASEMIDK Oxidation (M) 922.4066 0.40659669 2521;3555 P36542-2;B4DL14;Q8TAS0;P36542 ATP5C1 ATP synthase subunit gamma, mitochondrial;ATP synthase subunit gamma no no 0 1 0 3 0 1 37.397 37.45 3 0.0018779 8564 20230619_1882_Aki_TMTPro18x_K_F3 104.06 76.959 28437 19088 30919 34430 36525 39107 31687 39615 46494 34257 42927 39833 40275 35073 41531 28129 43751 37622 26284 17608 31303 33545 37378 39177 32709 40271 46337 35098 44073 40019 41254 35977 42252 28962 41797 35655 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52539000 19303 2521;3555 18057 36638 29355 29355 1538 1 9606 Homo sapiens -0.05771034867552771 NASNDIVR Unmodified 887.44609 0.44609374 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 3.5 0.5 1 1 32.166 32.235 2 0.00060318 6455 20230619_1882_Aki_TMTPro18x_K_F3 160.26 105.71 62968 33758 75283 75347 107800 117870 81754 103180 102260 53067 86749 85411 71828 69375 90719 35376 91414 68275 58194 31285 75932 73145 108700 115520 84627 105000 102200 57379 89107 84677 74737 70279 91630 38140 87297 64584 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89827000 19304 832 18058 36639;36640 29356 29356 1 9606 Homo sapiens -0.002131468018092164 NASSEEIQR Unmodified 1032.4836 0.48360145 4657 Q9UBU9;E9PIN3;Q68CW9 NXF1;DKFZp667O0311 Nuclear RNA export factor 1 yes no 0 0 0 1 0 1 29.811 29.811 2 0.0078592 5924 20230619_1880_Aki_TMTPro18x_K_F1 89.029 65.234 23429 10488 28106 26908 39583 44215 30437 37595 38422 24558 38528 43808 34440 37855 32633 18092 45133 44241 21639 9756.7 28326 26016 39967 43200 31487 38489 38636 26129 39378 43356 35262 38188 33819 20017 43056 41747 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15000000 19305 4657 18059 36641 29357 29357 1 9606 Homo sapiens -0.03134100326860789 NASTFEDVTQVSSAYQK Unmodified 1873.8694 0.86938634 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;B3KRK4;B4E358 CTTN Src substrate cortactin yes no 0 0 0 6 0.816 1 1 1 54.55 54.62 3 1.1765E-13 15848 20230619_1886_Aki_TMTPro18x_K_F6 159.18 147.74 172840 131520 171250 126140 129860 178580 202520 151930 213460 254100 238160 261920 214060 186240 193550 276890 236900 259540 159740 120430 173280 128700 140350 176000 200250 159840 217960 251490 242280 262830 218330 199350 200050 275550 226400 246610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1200400000 19306 1413 18060 36642;36643;36644 29358 29358 1 9606 Homo sapiens -0.03259357511751659 NASYYGNR Unmodified 943.41479 0.41479361 1609 Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2;K7EIH8;K7ER44;K7EK03;K7EPP7;K7ESP1;K7ELJ8;K7EJV7;K7EN19;K7EJL5;K7EJE9;A0A6I8PR93 DNAJC7 DnaJ homolog subfamily C member 7 yes no 0 0 0 6 0.816 1 1 1 31.483 31.553 2 0.0017353 6351 20230619_1886_Aki_TMTPro18x_K_F6 137.9 120.81 84141 40655 91304 97336 142640 156250 112150 128670 122510 77720 110040 103100 92491 89932 105530 50409 123070 91518 77659 37749 92962 94269 143260 152750 115200 131910 123570 82132 112710 103040 95668 91109 107720 53797 117370 86605 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 66699000 19307 1609 18061 36645;36646;36647 29359;29360 29359 2 9606 Homo sapiens -0.05917719835895241 NATDAVGIVLK Unmodified 1099.6237 0.62372375 3623 P51398-2;P51398-3;P51398;V9GYL9;V9GZ03;V9GYJ9;V9GYW1;V9GYA7;V9GYC9;V9GY11 DAP3 28S ribosomal protein S29, mitochondrial yes no 0 0 0 8 0 1 55.313 55.375 3 0.013173 15860 20230619_1888_Aki_TMTPro18x_K_F8 65.563 36.264 51880 38324 45815 49882 47853 52001 49752 50714 57179 57077 54687 49973 59535 48747 46981 58933 52638 54463 47896 35195 47096 49449 49612 52393 50295 52065 57757 57133 56393 51032 60000 50875 48374 58776 50321 51770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56689000 19308 3623 18062 36648 29361 29361 1 9606 Homo sapiens 0.07789683677492576 NATDLQNSSMSEEELTK Unmodified 1895.8419 0.84185096 1090 Q5QNY5;A0A0S2Z497;P40855;B7Z6I5;H0YJ60 PEX19 Peroxisomal biogenesis factor 19 yes no 0 0 0 3 0 1 49.687 49.762 3 0.0019409 14009 20230619_1882_Aki_TMTPro18x_K_F3 69.935 59.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19309 1090 18063 36649 29362 29362 1 9606 Homo sapiens -0.07023628834258488 NATEEPNEYAR Unmodified 1292.5633 0.56330834 2832 D3DW38;H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7 hCG_22457;RALGAPA2 Ral GTPase-activating protein subunit alpha-2 yes no 0 0 0 1 0 1 33.793 33.793 2 0.0058233 7494 20230619_1880_Aki_TMTPro18x_K_F1 85.377 64.507 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19310 2832 18064 36650 29363 29363 1 9606 Homo sapiens -0.07127078443522805 NATHEQAAAALK Unmodified 1223.6258 0.62584901 4027 Q5JUW8;Q59FY1;Q92796-2;Q92796 DLG3 Disks large homolog 3 yes no 0 0 0 6 0 1 35.065 35.118 3 0.0007857 7671 20230619_1886_Aki_TMTPro18x_K_F6 90.731 74.099 10597 8613 10049 11581 10498 9666.5 11333 9545.5 16910 13323 15273 14477 14693 12674 11745 13143 15490 16984 9794 7909.5 10267 11423 10887 9923.4 11545 9872.1 16831 13308 15709 14581 14879 13164 12210 13410 14795 16086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5853600 19311 4027 18065 36651 29364 29364 1 9606 Homo sapiens 0.02298112415292053 NATLVAGR Unmodified 800.45045 0.45045083 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q96T67 ATAD3A ATPase family AAA domain-containing protein 3A yes no 0 0 0 7 0.816 1 1 1 34.762 34.801 2 0.018103 7560 20230619_1886_Aki_TMTPro18x_K_F6 90.709 16.294 37054 22170 31618 40015 43526 48137 41872 47187 61380 35555 43155 43844 46240 44960 40144 36218 58661 44729 34164 20463 32803 39009 44275 48001 42902 47946 60611 36868 45264 44172 46873 45861 41919 37037 55851 42444 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141280000 19312 4603 18066 36652;36653;36654 29365 29365 1 9606 Homo sapiens 0.04224362411753191 NATNEQDLANR Unmodified 1244.5745 0.57454173 3506 P26232-2;P26232-5;P26232;P26232-3 CTNNA2 Catenin alpha-2 yes no 0 0 0 2 0 1 32.124 32.184 2 6.8756E-12 6565 20230619_1881_Aki_TMTPro18x_K_F2 201.75 179.01 13035 9468.4 18948 17303 22341 23318 19684 23391 21790 14638 24683 28825 22583 24453 22328 11311 29704 25479 12090 8733.1 18796 16902 22840 23110 20084 23649 22157 15701 25127 28443 23142 24659 23050 12414 28320 24066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19423000 19313 3506 18067 36655 29366 29366 1 9606 Homo sapiens -0.03796256349392024 NATNVEQAFMTMAAEIK Unmodified 1867.8808 0.88081943 4495 Q9H0U4;E9PLD0;Q6FIG4;Q92928 RAB1B;RAB1C Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C yes no 0 0 0 7.5 0.5 1 1 65.311 65.334 3 1.4988E-13 20225 20230619_1887_Aki_TMTPro18x_K_F7 156.22 138.73 67056 49948 57659 58078 42010 52083 60617 56621 70665 72239 69263 70006 81736 75761 73936 69396 69014 80263 61898 45817 59128 57934 45452 53229 60360 57970 71385 72118 71687 71335 82681 77623 75025 70476 66158 76078 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 505640000 19314 4495 18068 36656;36657 29367 29367 1 9606 Homo sapiens -0.01840575013625312 NATNVEQSFMTMAAEIK Unmodified 1883.8757 0.87573405 3725 Q5U0I6;P62820;B7Z8M7;E7END7;P62820-2;P62820-3;Q96RD8 RAB1A Ras-related protein Rab-1A yes no 0 0 0 7.33 0.471 2 1 64.049 64.074 2;3 2.581E-19 19552 20230619_1888_Aki_TMTPro18x_K_F8 192.23 18.467 82220 63814 70209 77721 59708 78473 74349 71192 92975 97210 91387 88504 104550 85394 101540 101220 91273 100470 75911 58552 72219 77354 63403 79109 74701 73946 93648 96603 94409 90136 106100 89056 102740 101430 87492 95398 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 840630000 19315 3725 18069 36658;36659;36660 29368;29369 29369 2 9606 Homo sapiens -0.030848788762568802 NAVDAFR Unmodified 791.3926 0.3926016 853 Q96CW1;Q96CW1-2;A0A087WY71;B4E304;E9PFW3;B4DNB9;C9JPV8;C9JGT8;C9JJD3;H7C4C3;C9JTK4;A0A8I5KWD3;A0A8I5QJU5;C9JJ47;A0A8I5KT55 AP2M1 AP-2 complex subunit mu yes no 0 0 0 5 0.816 1 1 1 40.269 40.344 2 0.011257 9642 20230619_1885_Aki_TMTPro18x_K_F5 116.88 64.201 386990 298090 357560 392800 388730 373080 396430 413140 451970 428160 496270 504190 514930 416090 441010 532150 559250 515650 357480 273740 366270 388650 401190 379790 401130 419750 458990 434150 507890 505590 521380 438250 456760 531710 533640 490100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 323860000 19316 853 18070 36661;36662;36663 29370 29370 1 9606 Homo sapiens -0.011438995136700214 NAVEEYVYEFR Unmodified 1417.6514 0.65139506 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 3.5 0.5 1 1 59.801 59.817 3 3.5818E-05 18337 20230619_1882_Aki_TMTPro18x_K_F3 135.6 104.41 36893 33556 35798 37883 33855 40556 41587 39731 42735 44359 44685 42754 41962 40128 45771 48095 42429 45911 34129 30749 36446 37949 35546 40791 41522 40775 43556 44532 45638 43400 43118 41881 46307 48078 40653 43617 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 66514000 19317 769 18071 36664;36665 29371;29372 29371 2 9606 Homo sapiens -0.04072457852930711 NAVEEYVYEMR Oxidation (M) 1417.6184 0.61838038 3544 P34932;B4DH02;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8 HSPA4 Heat shock 70 kDa protein 4 yes no 0 1 0 2.5 0.5 1 1 49.64 49.708 3 0.020848 14281 20230619_1881_Aki_TMTPro18x_K_F2 55.899 47.989 95867 66146 85424 91344 79911 46760 89770 92983 58057 131610 148030 109200 139180 97654 159540 127940 135730 119460 88479 60802 87539 89638 83306 51847 89091 92838 64771 130040 147070 111600 143070 102830 160370 127710 129990 113610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173740000 19318 3544 18072 36666;36667 29373 29373 2207 1 9606 Homo sapiens -0.07372407967295658 NAVEEYVYEMR Unmodified 1401.6235 0.62346575 3544 P34932;B4DH02;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8 HSPA4 Heat shock 70 kDa protein 4 yes no 0 0 0 2.5 0.5 1 1 56.599 56.626 3 9.8696E-10 17230 20230619_1881_Aki_TMTPro18x_K_F2 190.53 179.21 40263 32654 38188 37928 32029 41565 39792 40232 48193 51635 50316 54424 56158 44469 45045 56400 46145 57025 37212 29942 38878 37931 34030 41716 39946 41495 48731 51649 51795 54769 56573 46846 46129 56486 44216 54116 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 195190000 19319 3544 18072 36668;36669 29374;29375 29374 2 9606 Homo sapiens -0.061281041046640894 NAVITVPAYFNDSQR Unmodified 1693.8424 0.84238373 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;Q2F839 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 3 2.92 2 1 1 56.841 56.86 2;3 2.0883E-25 16485 20230619_1888_Aki_TMTPro18x_K_F8 190.86 167.18 138260 108420 129440 129500 112060 119080 140010 143210 168310 155450 151390 130370 169460 153800 159920 158900 163180 162130 127750 99462 131960 128990 118540 121790 140450 144940 169180 155740 156790 134370 171990 158150 162960 159800 156090 153960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1313000000 19320 1488 18073 36670;36671;36672;36673 29376;29377;29378 29378 3 9606 Homo sapiens 0.023216234583742335 NAVIVALSSK Unmodified 1000.5917 0.59169534 3688 P61086;B4DIZ2;P61086-2;B3KSH4 UBE2K;HIP2 Ubiquitin-conjugating enzyme E2 K yes no 0 0 0 3.5 0.5 1 1 56.549 56.57 3 7.8891E-05 17018 20230619_1882_Aki_TMTPro18x_K_F3 133.81 103.24 145190 123530 118600 121570 121380 136510 130670 131230 164430 132770 139600 118850 129480 117860 142200 135920 141090 132670 134080 113090 122740 123230 126250 136850 132260 134460 164510 133770 143840 121350 133140 122550 144280 136150 134950 126080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 240160000 19321 3688 18074 36674;36675 29379;29380 29379 2 9606 Homo sapiens 0.09142315994381534 NAVIVDTTICDPHYNLAR Unmodified 2071.0157 0.015673424 3821 Q6AWA4;Q12789;Q6AHZ7;Q12789-3 DKFZp686O0870;GTF3C1;DKFZp686A111 General transcription factor 3C polypeptide 1 yes no 0 0 0 6 0 1 51.403 51.48 3 9.5168E-10 14556 20230619_1886_Aki_TMTPro18x_K_F6 136.2 131.05 15462 11098 15252 18834 15174 15376 18119 15828 22332 18535 19380 16568 23490 18528 18415 23670 21492 23668 14285 10226 15531 18324 15840 15816 18221 16226 22385 18542 20179 16999 23596 19330 19014 23686 20548 22472 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74430000 19322 3821 18075 36676 29381 29381 1 9606 Homo sapiens 0.023006214525139512 NAVLEADFAK Unmodified 1076.5502 0.55022446 2906 Q86U62;Q6IBT1;E9KL30;Q99436;B2RAQ9;Q5TBG5;Q99436-2 PSMB7 Proteasome subunit beta type;Proteasome subunit beta type-7 yes no 0 0 0 5 0 1 53.746 53.816 2 0.007523 15395 20230619_1885_Aki_TMTPro18x_K_F5 93.058 68.135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19323 2906 18076 36677 29382 29382 1 9606 Homo sapiens 0.015011352350256857 NAVTQEFGPVPDTAR Unmodified 1600.7845 0.7845345 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;B4DLY4;B4DJW1;A0A7I2V614;B4DEC3;Q71UF1;B4DW08;O75944 ACO2;ACON Aconitate hydratase, mitochondrial yes no 0 0 0 4.5 0.5 2 2 48.865 48.922 2;3 9.8251E-25 13468 20230619_1883_Aki_TMTPro18x_K_F4 291.68 256.07 115090 82963 102800 115390 92047 96232 123650 122360 109660 194060 215700 199420 227110 190870 175600 202230 241560 217120 106240 76253 105370 113610 97229 99374 122510 125120 117010 192260 216650 201930 228960 197820 183240 203810 230310 206160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 606420000 19324 1050 18077 36678;36679;36680;36681 29383;29384 29383 2 9606 Homo sapiens 0.008173615329269523 NAVTQFVSSMSASADVLALAK Unmodified 2109.0776 0.077604979 1449 A0A384NPX8;A0A384MTZ1;P47985;P0C7P4 UQCRFS1;UQCRFS1P1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11;Putative cytochrome b-c1 complex subunit Rieske-like protein 1 yes no 0 0 0 4.5 0.5 1 1 66.194 66.222 3 1.1164E-05 20906 20230619_1883_Aki_TMTPro18x_K_F4 94.057 74.238 3061.9 2991.8 2364.4 3352.2 4062.1 3533.1 3112.5 3296.2 3597.3 4525.9 4330.1 2956.6 3104.8 2721.5 4729.6 3632.8 3184.7 4918.9 2829.3 2740.7 2489.9 3357.3 4054.5 3557.5 3208.6 3415.2 3671.7 4458.9 4348 3067.6 3283.1 2867.3 4690.4 3710.4 3074 4652 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16998000 19325 1449 18078 36682;36683 29385 29385 1 9606 Homo sapiens 0.06742928081030186 NAVWALSNLCR Unmodified 1302.6503 0.65028963 2495;3632 B4DII5;B4DWX3;O60684;Q5TFJ7;G1UI19;Q5BKZ2;P52294;B3KXZ2;B3KWR2;C9JYI4 KPNA6;KPNA1 Importin subunit alpha;Importin subunit alpha-7;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed no no 0 0 0 5 0 1 58.348 58.404 2 1.9467E-08 17224 20230619_1885_Aki_TMTPro18x_K_F5 173.24 125.2 137710 131110 124520 118200 136950 188610 149050 151600 219930 70488 69460 78741 75639 62229 97331 80457 78698 81087 127360 119900 127790 121450 142060 184490 151640 155220 213540 76161 78727 79059 78084 65703 97469 80650 75495 77002 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72965000 19326 2495;3632 18079 36684 29386 29386 1 9606 Homo sapiens 0.011070492972066859 NAWNYMLNNYTK Unmodified 1530.6925 0.69254837 3942 Q15800;D6REA2;D6RDP9;D6R952 MSMO1 Methylsterol monooxygenase 1 yes no 0 0 0 4 0 1 60.963 60.966 3 0.0014164 18714 20230619_1883_Aki_TMTPro18x_K_F4 93.011 75.799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19327 3942 18080 36685 29387 29387 1 9606 Homo sapiens -0.051570200850619585 NAYVWSQK Unmodified 994.48723 0.48723027 4304 V9HVZ6;Q92747;Q53GB6;A0A0K0K1L3;Q59GQ0;A0A1W2PNV4;Q92747-2;E9PF58;Q75MY0 HEL-68;ARPC1A Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 2.5 0.5 1 1 48.143 48.218 2 0.0038014 13574 20230619_1881_Aki_TMTPro18x_K_F2 118.32 76.23 140700 119170 115480 136550 183930 211430 165510 169980 199860 121210 124820 97841 111180 101530 141080 111970 129140 93065 129930 109240 120590 137410 185320 207130 168900 175120 198460 124610 130880 100650 115400 105130 142100 111420 123420 88726 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 585020000 19328 4304 18081 36686;36687 29388 29388 1 9606 Homo sapiens -0.01023385762334783 NCAAYLK Unmodified 838.40072 0.40072345 148;3549;1719;4165 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43;B3KWH4 MYH9;MYH11;MYH10;MYH14 Myosin-9;Myosin-11;Myosin-10;Myosin-14 no no 0 0 0 1 0 1 42.667 42.667 2 0.051919 11269 20230619_1880_Aki_TMTPro18x_K_F1 85.357 45.814 251220 202090 224810 215180 283210 326000 298500 304080 421200 147680 151870 112660 136490 110720 194080 112800 156410 103110 232070 185170 231440 217810 290350 320700 303590 307830 410480 157130 167660 116120 142600 114440 193790 113070 149650 98233 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90626000 19329 148;1719;3549;4165 18082 36688 29389 29389 1 9606 Homo sapiens -0.024940885885598618 NCAFVTYEK Unmodified 1130.5066 0.50664508 1299 A0A1U9X839;A0A1U9X830;P18615;P18615-3;H9ZYJ1;A0A0A0MSN9;B7Z6T4;P18615-4 NELFE;NELF-E;RDBP Negative elongation factor E yes no 0 0 0 7 0 1 48.12 48.207 3 0.0008894 12777 20230619_1887_Aki_TMTPro18x_K_F7 90.108 71.328 174300 132830 163740 168210 163610 184840 177480 200610 200560 185760 206810 195470 221640 170610 202290 222890 218030 206480 161020 121940 167240 167230 170400 185980 178960 203370 203220 188800 212470 197300 224700 179630 207020 222170 208370 196330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75306000 19330 1299 18083 36689 29390 29390 1 9606 Homo sapiens -0.05338797533750039 NCAVEFNFGQR Unmodified 1340.5932 0.59316868 95 Q9BUJ2;A0A0A0MRA5;Q9BUJ2-2;Q9BUJ2-4;A8K6U7;A8K3W4;B7Z4B8;A0A024R0J9;Q9BUJ2-3;M0QYZ0;M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 7.5 0.5 1 1 50.246 50.322 2 1.7855E-08 13654 20230619_1888_Aki_TMTPro18x_K_F8 174.98 150.13 58966 50957 55262 57744 49366 62169 57389 53422 69322 64706 63559 60467 67073 55842 55401 71364 65544 69056 54515 46704 56379 57826 52045 62328 57771 55501 69716 64687 65603 61441 67791 58586 57191 71287 62638 65601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46383000 19331 95 18084 36690;36691 29391;29392 29392 2 9606 Homo sapiens -0.06350417979183476 NCCFEHR Unmodified 1021.3858 0.38581844 4435 Q9BTY7;Q96BK8 HGH1;C8orf30A Protein HGH1 homolog yes no 0 0 0 4 0 1 23.187 23.253 3 0.077842 3869 20230619_1883_Aki_TMTPro18x_K_F4 45.081 31.728 11281 7162.9 10484 12011 12571 13544 15490 16483 18825 13513 14627 16345 13583 14908 14436 11754 18521 14259 10410 6602.6 10760 11746 12972 13638 15545 16551 18801 13909 15174 16404 13966 15245 14872 12016 17652 13533 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23145000 19332 4435 18085 36692 29393 29393 1 9606 Homo sapiens -0.12401903728209618 NCDYQQEADNSCIYVNK Unmodified 2119.8575 0.8575178 3559 P36954;K7EKS1 POLR2I DNA-directed RNA polymerase II subunit RPB9 yes no 0 0 0 4 0 1 48.461 48.499 3 0.0044469 13277 20230619_1883_Aki_TMTPro18x_K_F4 60.317 56.349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19333 3559 18086 36693 29394 29394 1 9606 Homo sapiens -0.15761665588888718 NCECLSCIDCGK Unmodified 1514.5622 0.56220418 4620 Q9NX58;A8K3Y5;D6RDJ1 LYAR Cell growth-regulating nucleolar protein yes no 0 0 0 4 0 1 46.206 46.249 2 0.023884 12270 20230619_1883_Aki_TMTPro18x_K_F4 63.408 57.563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19334 4620 18087 36694 29395 29395 1 9606 Homo sapiens -0.17449443462260206 NCEPMIGLVPILK Unmodified 1482.7938 0.79384232 522 A0A024R8L0;J3QLS3;Q9Y2R9;J3KSI8;J3QQS1;J3QKW2 MRPS7 28S ribosomal protein S7, mitochondrial yes no 0 0 0 2 0 1 63.489 63.497 3 0.0030108 20181 20230619_1881_Aki_TMTPro18x_K_F2 80.967 64.742 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19335 522 18088 36695 29396 29396 1 9606 Homo sapiens 0.07175715293237772 NCETDTLINYMAK Oxidation (M) 1587.6909 0.69089339 49 G5EA31;A0A024QZM6;P53992;B4DSN3;B7ZAY6;P53992-2 SEC24C Protein transport protein Sec24C yes no 0 1 0 5 0 1 50.277 50.353 3 2.0178E-05 13923 20230619_1885_Aki_TMTPro18x_K_F5 117.07 109.7 39895 32649 35076 38806 39116 37734 41696 42868 50081 41121 52017 47333 50304 41577 39065 54650 67448 53038 36853 29944 36109 38682 40359 38376 42156 43396 50577 41850 53153 47628 50886 43767 41567 54569 64160 50446 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28573000 19336 49 18089 36696 29397 29397 23 1 9606 Homo sapiens -0.0794444195601045 NCFASVFEK Unmodified 1100.4961 0.4960804 3234 Q53R19;O15144;A0A024R408;Q9BXV5 ARPC2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 1 0 1 56.685 56.685 3 0.0011996 17130 20230619_1880_Aki_TMTPro18x_K_F1 95.573 66.846 36224 39381 40263 35405 42613 51732 42973 35241 50030 37561 37385 29155 33885 30946 46141 33154 29173 28824 33595 35999 40577 36325 44120 50714 43509 37215 50031 37635 38772 30063 35276 31973 45697 33089 28074 27424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116880000 19337 3234 18090 36697 29398 29398 1 9606 Homo sapiens -0.050147801881848864 NCGCLGASPNLEQLQEENLK Unmodified 2273.0416 0.041630178 3650 P54136;E5RJM9;E5RH09 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0 1 56.484 56.545 3 1.6406E-13 16476 20230619_1885_Aki_TMTPro18x_K_F5 149.63 134.54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19338 3650 18091 36698 29399 29399 1 9606 Homo sapiens -0.04396897158176216 NCGQMSEIEAK Unmodified 1265.538 0.53802156 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 3.5 0.5 1 1 43.536 43.593 3 0.0033888 11195 20230619_1882_Aki_TMTPro18x_K_F3 72.34 48.049 59393 47757 57134 59360 61002 67446 63212 63629 80980 78459 80840 79819 87320 73041 68883 88346 91938 83752 54896 43822 58297 59103 63150 67504 64164 65657 81500 78557 83199 80752 88051 76377 71745 88224 87686 79627 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90636000 19339 1292 18092 36699;36700 29400 29400 1 9606 Homo sapiens -0.08412592561967358 NCGQTVHDEVANK Unmodified 1470.6521 0.65214012 1103 O14964;A0A7I2V3F9;A0A7I2V5A3;A0A7I2V3Z1;A0A7I2V6E0;A0A7I2V2K2;A0A7I2V5A2;A0A7I2V3I8;A0A7I2V2D8;A0A7I2V2W5;A0A7I2V2R9;A0A7I2V3J3;A0A0S2Z4R4;A0A7I2V637;B4E1E2;A0A0S2Z4Q4;O14964-2;A0A7I2YQD1;A0A7I2V307;I3L1P5;B4DFP5;A0A7I2V4X6;I3L165;A0A7I2V5D6;A0A7I2V310 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 3 0 1 35.242 35.299 3 6.3831E-05 7681 20230619_1882_Aki_TMTPro18x_K_F3 109.07 96.241 55093 33338 46152 54870 61287 62411 59326 59094 77281 64773 75908 70148 71087 68843 56131 63647 85293 76339 50791 30730 47902 53699 62419 62444 60471 60752 77609 65363 77667 70932 72080 70764 58986 64741 81263 72406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75929000 19340 1103 18093 36701 29401 29401 1 9606 Homo sapiens -0.06435986475526079 NCGSFTR Unmodified 840.35484 0.35483589 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 6.5 1.12 1 1 1 1 31.058 31.113 2 0.0063258 6199 20230619_1886_Aki_TMTPro18x_K_F6 133.9 118.96 190450 82048 222890 219040 198860 247140 194560 233980 236180 205790 309070 353560 300590 300470 266650 135510 336240 322560 175840 76411 223340 210070 208540 247110 198000 239180 240900 214010 313560 349970 305720 302950 274810 149800 320940 304440 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 189020000 19341 161 18094 36702;36703;36704;36705 29402;29403;29404 29403 3 9606 Homo sapiens -0.0717273377077845 NCHLNENIEK Unmodified 1269.5772 0.57718426 3872 Q13907;A0A8Q3WKR8;Q13907-2;Q9BXS1 IDI1;IDI2 Isopentenyl-diphosphate Delta-isomerase 1;Isopentenyl-diphosphate delta-isomerase 2 yes no 0 0 0 3.5 0.5 1 1 37.025 37.074 3 9.8892E-06 8343 20230619_1883_Aki_TMTPro18x_K_F4 152.7 74.041 86009 19991 68629 73837 66433 62940 64520 65483 105960 90569 101580 85977 102600 92644 62490 128410 114450 94539 79041 18882 71128 69894 69179 64459 66463 67411 105370 90120 104280 87860 102870 97160 67479 126370 108860 90226 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108490000 19342 3872 18095 36706;36707 29405;29406 29406 2 9606 Homo sapiens -0.04682124216105876 NCIAQTSAVVK Unmodified 1189.6125 0.61250714 3980 Q4VC31;C9JQ41;H7C525 CCDC58 Coiled-coil domain-containing protein 58 yes no 0 0 0 4.5 3.5 1 1 44.143 44.152 3 0.00012363 11934 20230619_1880_Aki_TMTPro18x_K_F1 117.79 104.66 166720 143860 139790 150650 207500 225390 192270 183780 256720 126850 133140 105670 111770 101000 144160 127780 152870 116150 154010 131760 145340 152590 209910 221330 196550 189070 252540 130930 141360 108250 116420 105740 146400 127390 145930 110580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 140760000 19343 3980 18096 36708;36709 29407;29408 29407 2 9606 Homo sapiens 0.025285383117306992 NCIDITGVR Unmodified 1046.5179 0.51787847 1479 A8K7T4;A0A384NPY7;Q12907;B4DWN1;A0A8Q3WK65;D6RBV2;D6RIU4;D6RDX1 LMAN2 Vesicular integral-membrane protein VIP36 yes no 0 0 0 5 0 1 44.541 44.62 2 7.0591E-05 11472 20230619_1885_Aki_TMTPro18x_K_F5 128.86 83.177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19344 1479 18097 36710 29409 29409 1 9606 Homo sapiens -0.0035197543959384348 NCIGDFLK Unmodified 965.46405 0.46405199 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 7.5 0.5 1 1 56.08 56.14 2;3 0.0025474 16191 20230619_1888_Aki_TMTPro18x_K_F8 124.98 78.296 529660 483590 492000 481410 439360 532390 506090 555180 524820 564360 532960 460350 579440 500620 536050 608550 581530 542710 489830 442650 502100 487460 462740 535150 507340 565570 534280 566630 548050 473860 587930 520780 548750 605940 555690 516310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 289440000 19345 2126 18098 36711;36712 29410;29411 29411 2 9606 Homo sapiens -0.020061478713159886 NCIIVSPDAGGAK Unmodified 1300.6445 0.64453555 2257 B2R860;P11908;A0A140VK41;P11908-2;D3YTJ7;H7C540 PRPS2 Ribose-phosphate pyrophosphokinase 2 no no 0 0 0 7 0 1 47.751 47.839 2 0.0026537 12587 20230619_1887_Aki_TMTPro18x_K_F7 107.83 81.158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19346 2257 18099 36713 29412 29412 1 9606 Homo sapiens 0.006239059948711656 NCISTVVHQGLIR Unmodified 1495.7929 0.79293112 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 3.5 0.5 1 1 46.249 46.31 3 6.8194E-16 12292 20230619_1883_Aki_TMTPro18x_K_F4 179.83 152.95 51744 41781 44390 45725 54696 50301 50033 52469 62333 51510 48455 45952 54032 43855 47154 58451 53773 51788 47786 38292 45851 45938 55831 50609 51097 53412 62252 51961 50592 46862 54641 46086 48498 58098 51372 49266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 657480000 19347 3758 18100 36714;36715 29413 29413 1 9606 Homo sapiens 0.06486636968588755 NCIVLIDSTPYR Unmodified 1449.7286 0.72859953 3707 Q5JR94;P62241;Q5JR95 RPS8 40S ribosomal protein S8 yes no 0 0 0 5.33 3.09 1 1 1 54.714 54.758 2 7.6863E-18 15558 20230619_1888_Aki_TMTPro18x_K_F8 236.77 216.25 422170 364150 373170 363380 310200 360290 387130 385720 388790 464400 332200 337790 543170 407550 321390 554670 465720 465010 390130 333390 382160 367350 329440 365340 386050 394330 394560 461210 352600 351220 536930 426160 339950 549280 444200 442620 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2127099999.9999998 19348 3707 18101 36716;36717;36718 29414;29415;29416 29416 3 9606 Homo sapiens 0.02172437091780921 NCLALADDK Unmodified 1018.4753 0.47534495 3298 O75367;O75367-3;O75367-1;A0A8I5KRC6;B4DJC3;A0A8I5KS04;Q59FH0 H2AFY Core histone macro-H2A.1;Histone H2A yes no 0 0 0 3.5 0.5 1 1 46.786 46.847 3 0.00094488 12540 20230619_1883_Aki_TMTPro18x_K_F4 97.965 71.367 170840 116010 123950 143050 147380 147870 164820 168400 190420 160090 161610 129130 151730 140910 140760 181820 189060 155520 157440 106520 130280 142330 151730 149670 165930 170350 191310 161360 166510 133100 154810 147070 146210 180470 180200 148120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 352780000 19349 3298 18102 36719;36720 29417 29417 1 9606 Homo sapiens -0.03315370567838727 NCLALADDKK Unmodified 1146.5703 0.57030797 3298 O75367;O75367-3;O75367-1;A0A8I5KRC6;B4DJC3;A0A8I5KS04;Q59FH0 H2AFY Core histone macro-H2A.1;Histone H2A yes no 0 0 1 6.5 0.5 1 1 44.321 44.408 3 0.00012667 11427 20230619_1886_Aki_TMTPro18x_K_F6 128.28 87.693 285260 248730 269700 281750 308780 325980 331810 314120 358820 293270 338030 289440 327010 276830 275190 341390 384200 320910 263760 227960 275940 282490 318150 326100 334000 321200 362930 297540 346930 293920 331750 289380 287100 340690 366110 305250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 540140000 19350 3298 18103 36721;36722 29418 29418 1 9606 Homo sapiens 0.002885629033244186 NCLECQQHSQLK Unmodified 1543.6871 0.68714542 1543 P50851;P50851-2;A0A494BZW2;A0A494C1L5;E9PEM5;A0A494C0R9;Q59HC1;H0Y9N9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes no 0 0 0 6 0 1 36.754 36.822 3 3.6756E-07 8267 20230619_1886_Aki_TMTPro18x_K_F6 156.36 111.75 33379 25293 26604 25786 30599 28361 33115 33364 38235 35183 36522 29993 39148 34930 27424 43539 45663 39717 30798 23172 27639 26062 31513 28626 33399 33775 38592 35313 37607 30900 39347 36318 29186 43351 43473 37786 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37740000 19351 1543 18104 36723 29419 29419 1 9606 Homo sapiens -0.06295066939196658 NCLNPQFSK Unmodified 1106.5179 0.51787847 561 O75131;A0A024R994;Q05DL8;A0A087WYQ3;A0A087WXR6;E5RHZ0;E5RFT7;A0A087WUS8 CPNE3 Copine-3 yes no 0 0 0 1 0 1 46.194 46.194 2 0.00046539 12799 20230619_1880_Aki_TMTPro18x_K_F1 152.11 112.96 49038 39098 47118 44793 40986 42187 55383 52027 55088 55184 54292 62779 76252 59801 44892 73222 81766 72224 45322 35849 47920 44771 43407 43102 54999 52569 56132 55824 56730 63290 75642 62512 48384 73223 77810 68645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26949000 19352 561 18105 36724 29420 29420 1 9606 Homo sapiens -0.031119754396058852 NCLTNFHGMDLTR Unmodified 1577.7079 0.70788086 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;B7Z3M5;D6RB09;E9PFI5;H0Y8L7;D6RAS7;D6RED7 RPS3A 40S ribosomal protein S3a yes no 0 0 0 3 2.92 2 1 1 48.573 48.606 2;3 3.7517E-36 12913 20230619_1888_Aki_TMTPro18x_K_F8 271.64 236.96 364880 330020 325760 312510 268960 358000 338390 344860 379580 396980 311490 284610 402790 324320 289400 423020 385800 337400 337320 301970 333310 317950 286340 358330 338530 354480 382030 395040 326520 295550 402810 338530 302310 418330 367870 321550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3268299999.9999995 19353 3694 18106 36725;36726;36727;36728 29421;29422;29423 29423 3 9606 Homo sapiens -0.05786476559546827 NCLTNFHGMDLTR Oxidation (M) 1593.7028 0.70279548 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;B7Z3M5;D6RB09;E9PFI5;H0Y8L7;D6RAS7;D6RED7 RPS3A 40S ribosomal protein S3a yes no 0 1 0 7.5 0.5 1 1 42.193 42.231 3 4.2825E-06 10363 20230619_1888_Aki_TMTPro18x_K_F8 123.8 103.96 499140 403860 459830 461440 487080 484090 496270 507130 581050 555790 556530 516080 578720 471980 468970 597290 559490 536600 461210 370270 470700 461800 503790 488590 502590 517720 586280 557910 572720 524460 584660 495000 484520 594460 534290 510400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1470599999.9999998 19354 3694 18106 36729;36730 29424;29425 29425 2384 2 9606 Homo sapiens -0.07030780422155658 NCLVYSIPTNSSK Unmodified 1481.7184 0.71842877 2242 B2R7C2;O43264;O43264-2;B4E1J7 ZW10 Centromere/kinetochore protein zw10 homolog yes no 0 0 0 3 0 1 51.884 51.949 3 0.0017042 15020 20230619_1882_Aki_TMTPro18x_K_F3 76.073 62.109 84527 65017 76985 88723 85748 93100 86712 81421 105410 88274 99294 89298 95432 84281 99070 107480 98158 92733 78073 59729 79029 87671 88433 93536 87944 84208 106020 88936 101940 90520 97716 88292 100670 106790 93888 88254 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76107000 19355 2242 18107 36731 29426 29426 1 9606 Homo sapiens -0.0031617063348221564 NCMQANPHYAR Unmodified 1360.5765 0.57647276 2700 B7Z8V9;Q9H336-2;Q9H336 CRISPLD1 Cysteine-rich secretory protein LCCL domain-containing 1 yes no 0 0 0 7 0 1 29.555 29.662 3 0.00045322 5240 20230619_1887_Aki_TMTPro18x_K_F7 96.171 85.537 3739.5 2945.5 3303.2 3291.7 3587.1 5773 4788.2 3480.9 5309.5 5761.9 3944.7 6960.6 7445.6 4731.6 4757.9 5259.7 8448.7 7031.5 3453.7 2700.2 3399.5 3327.1 3751.1 5592.8 4768.7 3777.8 5334.7 5738.3 4283.7 6919.5 7354.3 4991.8 5090.1 5374.5 8038.2 6665 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5963800 19356 2700 18108 36732 29427 29427 1 9606 Homo sapiens -0.08939242136784742 NCNDFQYESK Unmodified 1303.5139 0.5139153 145 A0A024R1K7;Q04917;B2R6N6;Q9H4N8;A2IDB2 YWHAH 14-3-3 protein eta yes no 0 0 0 3.5 0.5 1 1 43.19 43.245 2 5.2083E-15 11017 20230619_1882_Aki_TMTPro18x_K_F3 242.35 213.95 93740 69442 74072 80834 73158 78580 89430 89581 104630 120810 121000 113910 139300 113110 79775 141410 142660 117140 86477 63701 76909 80700 76546 79912 89710 91577 106470 120180 124030 115980 138770 118190 85968 140120 135710 111610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 226810000 19357 145 18109 36733;36734 29428 29428 1 9606 Homo sapiens -0.12570109723992573 NCPHIVVGTPGR Unmodified 1305.6612 0.66118866 724 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;F6TRA5;Q59G92;A0A0A0MT12;B4DIJ6;F6S4E6;B4DIZ8;A0A140T973;A0A140T9K1;A0A140T9L4 DDX39B;hCG_2005638 Spliceosome RNA helicase DDX39B yes no 0 0 0 3.67 3.09 1 1 1 36.179 36.194 3 7.2782E-10 8394 20230619_1880_Aki_TMTPro18x_K_F1 179.6 152.91 333130 251880 309700 337560 379900 404690 395710 385140 479640 365550 423570 420770 416380 362640 370810 398850 473800 458190 307720 231370 317790 334670 389510 403640 400540 394310 481230 372400 436840 422750 423210 377930 383690 403490 452230 434620 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1331400000 19358 724 18110 36735;36736;36737 29429;29430;29431;29432 29429 4 9606 Homo sapiens 0.02058451671473449 NCPHVVVGTPGR Unmodified 1291.6455 0.6455386 3204 O00148;B4DX78;O00148-2;K7EQN7;A0A024R7H0;O00148-3;A0A0D9SEM9;K7EPJ3 DDX39A;DDX39 ATP-dependent RNA helicase DDX39A yes no 0 0 0 5.33 3.09 1 1 1 33.654 33.68 3 4.5398E-24 7396 20230619_1880_Aki_TMTPro18x_K_F1 202.18 185.34 86358 69469 74584 79128 94679 90912 85075 97132 113040 106560 117600 99762 117070 102570 97526 135400 139940 118430 79754 63691 77050 79304 96468 91231 87234 98988 113750 107000 120260 101820 118640 107420 102060 134470 133340 112750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1024799999.9999999 19359 3204 18111 36738;36739;36740 29433;29434;29435 29433 3 9606 Homo sapiens 0.01138165154429771 NCPSPMQTGATTDDSK Oxidation (M) 1724.6982 0.69816361 1058 P26378-4;A0A494C0F8;P26378;P26378-3;P26378-1;P26378-5;P26378-2;A0A494C147;B1APY9;A0A494C1D9;A0A0R4J2E6;A0A494C015;A0A494C0Q5;A0A494C011;A0A494C0M6;A0A494BZW4 ELAVL4 ELAV-like protein 4;ELAV-like protein yes no 0 1 0 3 0 1 35.817 35.874 3 0.011198 7936 20230619_1882_Aki_TMTPro18x_K_F3 59.261 50.329 3966.2 4376.3 5567.1 6105.4 6105.9 5905 8496.6 7793.5 7129.9 6125.2 11227 7336.4 7086.4 7565.8 8422.8 6838.1 10186 6612.9 3687.7 4016.5 5535.6 6021.6 6345.9 6029.5 8385.5 7789 7484.8 6316.3 11120 7419.1 7437.2 7749.6 8628.7 6878.4 9703.6 6296.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8596100 19360 1058 18112 36741 29436 29436 618 1 9606 Homo sapiens -0.13519754146273044 NCQHANAERPTVAR Unmodified 1622.7696 0.76956991 2289 B2RAX6;Q9Y5J1;F6VJE8 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 0 0 1 6 1 1 1 23.014 23.097 4 7.0207E-16 3804 20230619_1885_Aki_TMTPro18x_K_F5 195.1 157.08 76253 73076 68840 71506 78596 78139 73196 81490 94367 79852 84972 71145 82274 84320 71366 79029 90661 77358 70528 66869 70690 72490 80708 78657 74796 82939 94532 80574 87394 73121 83656 86209 73862 79406 86465 73541 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49030000 19361 2289 18113 36742;36743 29437;29438 29437 2 9606 Homo sapiens -0.0169040881607998 NCSSFLIK Unmodified 967.4797 0.47970205 3051 H0YKD8;P46779;P46779-2;P46779-3;Q59F34;H0YMF4;P46779-4;P46779-5;H0YLP6 RPL28 60S ribosomal protein L28 yes no 0 0 0 2.5 0.5 1 1 51.023 51.081 2 0.00058895 14584 20230619_1882_Aki_TMTPro18x_K_F3 172.21 118.66 710420 634620 637360 596890 625300 784480 767970 777870 788690 387350 265550 205800 364940 279350 460120 392200 391370 275410 656730 580680 653300 609020 655080 778890 766400 784390 780450 407600 301480 220360 373870 291870 461970 386030 374330 263250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1049699999.9999999 19362 3051 18114 36744;36745 29439;29440 29440 2 9606 Homo sapiens -0.005338613542448911 NCSSPEFSK Unmodified 1054.439 0.43895945 2180 Q99829;B0QZ18;F2Z2V0;A6PVH9;E7ENH5;Q59EI4;Q5JX58;Q5JX59;Q5JX45;Q5JX60;Q5JX44;Q5JX56;Q5JX52;Q5JX61;Q5JX55;Q5JX54;E7EV27;Q5JX57;Q5JX53 CPNE1 Copine-1 yes no 0 0 0 5.33 0.471 2 1 40.768 40.857 2;3 0.00010348 9894 20230619_1886_Aki_TMTPro18x_K_F6 155.06 96.077 120050 78146 123040 113400 163390 177000 148960 159830 178080 137240 170900 173280 167570 158180 161140 110500 216140 184740 110890 71893 125300 112440 166130 173700 151940 163770 179340 141090 175560 173670 170990 161180 166690 116150 206050 174790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 327310000 19363 2180 18115 36746;36747;36748 29441;29442 29442 2 9606 Homo sapiens -0.08608247464553642 NCTAGAVYTYHEK Unmodified 1512.6667 0.66672755 796 A8K670;A0A075B6F9;Q9Y314;M0R3B2;M0R1T7;M0QX85;B4DUN3;M0R1K2 NOSIP Nitric oxide synthase-interacting protein yes no 0 0 0 6.5 0.5 1 1 39.151 39.224 3 3.833E-11 8926 20230619_1887_Aki_TMTPro18x_K_F7 197.14 158.35 58490 50786 54429 56599 58794 62261 65184 56454 72402 75340 79215 63730 77923 69444 59899 86703 88931 68743 54073 46539 55708 56771 60886 62426 65563 58597 73638 74801 80767 65498 78763 72328 62970 85774 84668 65557 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79662000 19364 796 18116 36749;36750 29443;29444 29444 2 9606 Homo sapiens -0.06909914327388833 NCTCGLAEELEK Unmodified 1422.6119 0.61191479 4103 Q6FI81-3;Q6FI81;Q6FI81-2;H3BTZ8 CIAPIN1 Anamorsin yes no 0 0 0 3.5 0.5 1 1 51.334 51.384 2 0.00041862 14760 20230619_1882_Aki_TMTPro18x_K_F3 125.54 98.444 35994 32100 34848 38984 28923 39190 40371 38025 48377 49230 43396 39442 44057 42936 36668 51692 46899 49528 33293 29438 35444 38806 30886 39573 40283 39231 48647 48869 44753 40619 44644 44622 38066 51639 44792 47055 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69101000 19365 4103 18117 36751;36752 29445 29445 1 9606 Homo sapiens -0.08248669190311375 NCTIVSPDAGGAK Unmodified 1288.6082 0.60815004 3683 Q53FW2;P60891;B1ALA9;A0A2R8Y7H4;P60891-2;A0A6Q8PGP2;A0A6Q8PHI4;A0A6Q8PG13;A0A6Q8PGX9 PRPS1 Ribose-phosphate pyrophosphokinase 1 yes no 0 0 0 5.5 0.5 1 1 42.831 42.919 3 3.2206E-05 10718 20230619_1886_Aki_TMTPro18x_K_F6 115.8 95.709 162920 120620 141440 137020 140000 149630 149540 151450 193340 184290 201370 177450 185480 169370 178410 183440 220360 180540 150390 110620 145400 137270 145880 150440 151620 155450 194760 184320 205360 180240 189590 175680 183870 183970 210160 171650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 310080000 19366 3683 18118 36753;36754 29446;29447 29447 2 9606 Homo sapiens -0.024609709018477588 NCTVFANDLNPESHK Unmodified 1744.7839 0.78388257 3965 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes yes 0 0 0 5.5 0.5 1 1 47.51 47.588 3 4.6175E-06 12856 20230619_1886_Aki_TMTPro18x_K_F6 94.569 75.737 36306 36735 39644 37575 36175 38182 50874 42655 53398 40540 41168 38785 40148 33234 50727 50275 48257 48409 33647 33622 39939 37922 38209 38690 50490 43233 53718 41051 42785 39304 41513 35371 51258 50140 46197 45998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91761000 19367 3965 18119 36755;36756 29448 29448 1 9606 Homo sapiens -0.05871801178432179 NCTVYCGGIASGLTDQLMR Oxidation (M) 2130.9496 0.94964405 2070 O15187;Q2TSD2;A8K5C4;Q01085;Q01085-2;B4DHS3;Q59G49;Q49AS9 TIAL1 Nucleolysin TIAR yes no 0 1 0 1 0 1 55.719 55.719 3 0.012592 16742 20230619_1880_Aki_TMTPro18x_K_F1 49.592 40.773 12294 14654 20966 16603 15514 15624 17303 17372 16730 14661 14734 12352 12817 12208 16751 11724 11519 11971 11467 13418 20465 16612 16553 15923 17342 17556 16992 14892 15122 12644 13332 12569 16648 11822 11075 11366 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141520000 19368 2070 18120 36757 29449 29449 1296 1 9606 Homo sapiens -0.07059278776250721 NCTYTQVQTR Unmodified 1269.5772 0.57718426 1319 P23193;A0A384MTX4;A0A1W2PPZ5;B7Z4W0;P23193-2;A0A1W2PRL9;B7Z4S1;Q6IB64;Q15560-2;A0A0A0MT58;Q15560 TCEA1;TCEA2 Transcription elongation factor A protein 1;Transcription elongation factor A protein 2 yes no 0 0 0 7 0.816 1 1 1 33.754 33.794 2 2.379E-07 7176 20230619_1886_Aki_TMTPro18x_K_F6 190.86 176.7 133740 86145 123690 123670 165650 176730 152210 153710 209940 125110 163070 140540 149680 133820 145680 88179 181200 135720 123420 79246 127110 122460 168460 174110 155980 157810 208410 128660 168760 141740 153090 135900 149810 92228 172710 128570 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 196070000 19369 1319 18121 36758;36759;36760 29450;29451;29452 29450 3 9606 Homo sapiens -0.04682124216083139 NCVAIAADR Unmodified 988.47601 0.47601365 1465 A0A384NL22;P49720;A0A087WXQ8;A0A087WY10;A0A087WUL2 PSMB3 Proteasome subunit beta type-3 yes no 0 0 0 3.5 0.5 1 1 36.58 36.63 2 0.0022818 8160 20230619_1883_Aki_TMTPro18x_K_F4 107.9 68.755 37878 25158 34702 42744 37605 55113 40293 45278 193470 39268 38352 44799 49277 45526 33670 33328 54557 47635 34959 23189 35625 41835 39364 54496 45019 46762 181690 40580 47070 45208 49333 46299 35654 34500 51950 45117 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37538000 19370 1465 18122 36761;36762 29453 29453 1 9606 Homo sapiens -0.01868531128138784 NCVAIAADRR Unmodified 1144.5771 0.57712468 1465 A0A384NL22;P49720;A0A087WXQ8;A0A087WY10;A0A087WUL2 PSMB3 Proteasome subunit beta type-3 yes no 0 0 1 7 0.816 1 1 1 31.817 31.861 3 1.3642E-19 6038 20230619_1887_Aki_TMTPro18x_K_F7 215.83 134.49 106410 81965 93265 96696 119450 130140 114650 114810 376550 84576 89181 87554 104810 87553 93637 97371 108230 88863 98255 75186 96249 96887 122470 128710 123610 117520 356300 87927 105560 88810 106110 90826 96226 97222 103280 84563 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 171130000 19371 1465 18123 36763;36764;36765 29454;29455;29456;29457 29456 4 9606 Homo sapiens 0.01061920574557007 NCVLLSRPEISTDER Unmodified 1787.8836 0.88359662 2096 B3KM89;A8K6V0;O94855;O94855-2;E9PDM8;Q9NWP5 SEC24D Protein transport protein Sec24D yes no 0 0 1 4.5 0.5 1 1 44.891 44.952 3 1.4724E-18 11594 20230619_1885_Aki_TMTPro18x_K_F5 197.15 160.86 110390 97646 100500 112460 117360 141770 135190 142870 173420 138410 118640 116550 146460 109820 118890 137460 138520 134630 102050 89503 103280 112760 121220 141130 136390 145680 172290 139530 125490 119100 147230 115060 122560 137480 132320 127920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168120000 19372 2096 18124 36766;36767 29458;29459 29459 2 9606 Homo sapiens 0.021170164354998633 NCWQNYLDFHR Unmodified 1551.6677 0.6677306 3453 P14854;A0A494C160 COX6B1 Cytochrome c oxidase subunit 6B1 yes no 0 0 0 2 0 1 53.895 53.924 3 3.2964E-05 16130 20230619_1881_Aki_TMTPro18x_K_F2 136.48 118.06 61742 56392 65392 74852 71934 95063 86361 87750 105310 72817 62561 61116 69332 61245 69413 67963 67006 63270 57160 51757 66315 74313 74720 94359 86779 89726 104430 74112 66503 62588 70583 63524 70439 67943 64108 60158 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 378120000 19373 3453 18125 36768 29460 29460 1 9606 Homo sapiens -0.08603655167848956 NDATAQAFLAEASVMTQLR Unmodified 2035.9997 0.99968901 2025 B5BU52;B2R6Q4;A8K3B6;P41240;B4DMZ0;B4DP99;Q53EL3 CSK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase CSK yes no 0 0 0 8 0 1 64.395 64.415 3 2.1404E-12 19695 20230619_1888_Aki_TMTPro18x_K_F8 150.69 133.95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19374 2025 18126 36769 29461 29461 1 9606 Homo sapiens 0.02312915215566136 NDDDEEEAARER Unmodified 1447.5811 0.58114325 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;C9J813;Q6PJM5;Q6P707;Q05DR4;C9JEK3;F8WE61;C9JE79 CALD1 Caldesmon yes no 0 0 1 1 0 1 27.709 27.709 3 4.5248E-10 5078 20230619_1880_Aki_TMTPro18x_K_F1 187.57 154.62 8469.7 7300.1 14876 13624 30361 31100 16506 20725 22406 15213 22189 17339 20783 20558 21055 7464 24031 17328 7883.3 6730.9 14799 13448 29915 29873 17638 21713 22468 15764 22682 17615 21288 20411 21488 8314.8 22917 16378 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44414000 19375 3798 18127 36770 29462 29462 1 9606 Homo sapiens -0.12474407979334501 NDDDQKIEQDGIKPEDK Unmodified 1985.9178 0.9177931 3467 Q5U058;P17677;P17677-2 GAP43 Neuromodulin yes no 0 0 2 2 0 1 43.656 43.738 4 5.3811E-06 11564 20230619_1881_Aki_TMTPro18x_K_F2 104.03 84.99 197550 188760 193930 230030 91794 73656 109020 99639 86998 138390 180980 101830 103040 80075 213390 57447 68320 39921 182830 173070 195860 226890 103630 87140 108570 101370 93649 136520 177510 104390 112580 82160 206170 57669 66574 38207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206670000 19376 3467 18128 36771 29463 29463 1 9606 Homo sapiens -0.0357290866254516 NDEELNK Unmodified 860.38758 0.3875758 3459;74 P16104;Q96QV6;Q9BTM1-2;B2R5B6;A0A3B3IS11;Q99878;A4FTV9;A0A0U1RR32;A0A024R017;Q08AJ9;B2R5B3;A0A024RAS2;A3KPC7;A0A0U1RRH7;Q16777;P04908;Q9BTM1;P20671;P0C0S8;Q6FI13;Q7L7L0;Q93077;Q96KK5;B4E0B3;H0YFX9 H2AFX;HIST1H2AA;H2AFJ;HIST1H2AJ;HIST1H2AK;HIST1H2AC;HIST1H2AB;HIST1H2AH;HIST2H2AC;HIST1H2AD;HIST1H2AG;HIST2H2AA3;HIST3H2A Histone H2AX;Histone H2A type 1-A;Histone H2A.J;Histone H2A;Histone H2A type 1-J;Histone H2A type 2-C;Histone H2A type 1-B/E;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 2-A;Histone H2A type 3;Histone H2A type 1-C;Histone H2A type 1-H no no 0 0 0 1.5 0.5 2 2 37.715 37.746 2;3 0.0017261 8787 20230619_1881_Aki_TMTPro18x_K_F2 135.6 87.253 983730 416930 1824900 1690200 2874000 2433500 1618800 3337800 922060 671240 2098800 2468300 829790 1785600 2230400 385270 2160100 1859400 913320 392640 1797400 1610700 2858700 2422900 1690200 3270600 1023100 872320 2047600 2400100 960480 1786000 2229000 498810 2065400 1751500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1677199999.9999998 19377 3459;74 18129 36772;36773;36774;36775 29464;29465;29466 29465 3 9606 Homo sapiens -0.04820248166947749 NDFEIVLPENAEK Unmodified 1516.7409 0.74093835 2446 Q99459;B3KY60;B4DSH1 CDC5L Cell division cycle 5-like protein yes no 0 0 0 3 0 1 59.845 59.874 2 0.02041 18357 20230619_1882_Aki_TMTPro18x_K_F3 73.466 47.807 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19378 2446 18130 36776 29467 29467 1 9606 Homo sapiens 0.0032375203581977985 NDFIESLPNSVK Unmodified 1361.6827 0.68269519 4250 Q8ND87;Q96NT1 DKFZp434K0835;NAP1L5 Nucleosome assembly protein 1-like 5 yes no 0 0 0 7 0 1 58.216 58.268 3 0.00071917 17096 20230619_1887_Aki_TMTPro18x_K_F7 101.6 69.587 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19379 4250 18131 36777 29468 29468 1 9606 Homo sapiens 0.016321151812007884 NDFTEEEEAQVR Unmodified 1465.6321 0.63211618 2881 E5RJR5;E5RI56;P63208 SKP1 S-phase kinase-associated protein 1 yes no 0 0 0 1 0 1 42.942 42.942 2 5.7086000000000006E-24 11381 20230619_1880_Aki_TMTPro18x_K_F1 259.55 238.08 237220 188080 225360 255040 211030 285600 241990 240910 342160 332050 337090 313450 356380 327750 267800 378790 353120 352230 219220 172750 229940 252340 221790 285290 245320 251640 342720 330320 346620 319670 359150 340190 279200 378040 337030 334840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 551750000 19380 2881 18132 36778 29469;29470 29470 2 9606 Homo sapiens -0.08207458934475653 NDFTEEEEAQVRK Unmodified 1593.7271 0.7270792 2881 E5RJR5;E5RI56;P63208 SKP1 S-phase kinase-associated protein 1 yes no 0 0 1 2 0.816 1 1 1 43.032 43.073 3 1.187E-15 11229 20230619_1881_Aki_TMTPro18x_K_F2 205.37 173.49 452700 451020 400180 383620 430930 442860 431610 474720 514850 521190 542850 407860 572720 473590 415690 629900 586610 462850 418760 412230 411180 394320 445180 444570 437940 483690 521070 520860 555810 422270 576170 494540 436040 620530 558750 441840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 505680000 19381 2881 18133 36779;36780;36781 29471;29472 29471 2 9606 Homo sapiens -0.046035254632897704 NDGTFIGYK Unmodified 1013.4818 0.48181054 1735 P31749;A0A804HJM6;B0LPE5;B3KVH4;A0A142IKA9;A0A0S2Z3D6 AKT1 RAC-alpha serine/threonine-protein kinase yes no 0 0 0 6.5 0.5 1 1 49.502 49.583 2 0.00071492 13395 20230619_1887_Aki_TMTPro18x_K_F7 125.97 89.773 67765 58804 55967 55705 53676 60944 63214 61529 76419 82702 86026 77078 81476 74808 79740 77755 83316 85450 62594 53814 57800 56636 56252 61286 63603 63375 77507 82277 87552 78429 83247 77397 81302 78536 79696 81071 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51972000 19382 1735 18134 36782;36783 29473 29473 1 9606 Homo sapiens -0.024391093448116408 NDHIQVGR Unmodified 937.47298 0.47297719 1712 Q8IXB1;Q8IXB1-2;A0A7P0TAQ9;B3KNK5;B4DP04 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 3.5 0.5 1 1 28.337 28.429 3 0.0029741 5039 20230619_1883_Aki_TMTPro18x_K_F4 88.948 61.206 34713 14080 30817 34264 43663 28819 39127 44108 53955 32566 37139 42068 32502 34436 30870 23506 41387 38078 31968 13094 31819 32852 44095 29915 40162 43687 53387 33839 38721 41975 33306 35180 31955 24645 39474 36024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24620000 19383 1712 18135 36784;36785 29474 29474 1 9606 Homo sapiens 0.0017396180938931138 NDHQEDFWK Unmodified 1217.5102 0.51015055 4514 Q9H4A4;A6NKB8;Q7RU04 RNPEP Aminopeptidase B yes no 0 0 0 3 0 1 44.657 44.73 3 0.00069619 11706 20230619_1882_Aki_TMTPro18x_K_F3 94.363 76.095 196570 50275 127510 171160 180430 87957 159110 178410 236090 210770 240510 233710 244680 221070 126860 219530 153790 240700 180450 47322 136170 161630 182100 97411 164050 176910 236270 211970 246450 235790 244030 228340 133120 221560 147490 228080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96397000 19384 4514 18136 36786 29475 29475 1 9606 Homo sapiens -0.08990411435547685 NDIAINELMK Unmodified 1159.5907 0.59070906 2310 B2RD27;P51665;B4DXI8;H3BNT7;H3BTM8 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes no 0 0 0 5.5 0.5 1 1 57.319 57.384 3 0.0014732 16829 20230619_1885_Aki_TMTPro18x_K_F5 89.805 63.207 88566 77448 77949 88814 75242 96237 96298 93667 113550 118780 118530 121200 127250 110850 104460 130860 130490 138090 81849 70989 80118 88867 79081 96681 96401 96543 114930 118770 121750 122570 128550 115750 108200 131510 124650 131050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 124210000 19385 2310 18137 36787;36788 29476;29477 29476 2 9606 Homo sapiens 0.017297335631383248 NDIASHPPVEGSYAPR Unmodified 1708.8169 0.81689726 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299;H7C597 SND1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 4 0 1 39.205 39.248 3 2.2389E-09 9235 20230619_1883_Aki_TMTPro18x_K_F4 135.23 115.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19386 1229 18138 36789 29478 29478 1 9606 Homo sapiens -0.009158510640645545 NDIHEDNLLECPPEELAR Unmodified 2162.9902 0.99024653 1003 Q59GQ7;A0A0C4DGA6;Q14527-2;Q14527;H7C5K0 HLTF Helicase-like transcription factor yes no 0 0 0 1 0 1 51.053 51.053 3 6.2298999999999995E-19 14802 20230619_1880_Aki_TMTPro18x_K_F1 184.8 173.85 50162 47937 46588 58415 49400 59076 56465 55103 59293 66472 68670 65760 70934 68491 62245 77581 79883 78336 46404 43952 47746 58125 51317 59592 56617 56887 60654 66550 70092 66911 71981 71010 64505 77816 76251 74402 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 177380000 19387 1003 18139 36790 29479;29480 29480 2 9606 Homo sapiens -0.04472897860568992 NDIHTLLK Unmodified 952.53418 0.53418046 3253 O43324;D6RBD7;C9J1V9;O43324-2;H0YAL7;H0YAH9 EEF1E1;EEF1E1-BLOC1S5 Eukaryotic translation elongation factor 1 epsilon-1 yes no 0 0 0 8 0 1 45.06 45.089 3 0.00086487 11517 20230619_1888_Aki_TMTPro18x_K_F8 113.62 51.66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19388 3253 18140 36791 29481 29481 1 9606 Homo sapiens 0.05601473788806288 NDITAWQECVNNSMAQLEHQAVR Unmodified 2713.2337 0.23368148 2250 Q53HE3;B2R7W3;O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes no 0 0 0 7 0 1 62.792 62.827 3 0.0022901 19106 20230619_1887_Aki_TMTPro18x_K_F7 67.827 61.178 29540 20596 29358 31099 27496 38833 30654 37574 38688 36338 34408 35340 36037 28692 35635 43104 32086 42634 27288 18951 29830 30632 28872 38611 30995 38410 38792 36757 35586 35712 36693 30589 36094 43029 30807 40460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 353990000 19389 2250 18141 36792 29482 29482 1 9606 Homo sapiens -0.05440601477994278 NDIYSVSR Unmodified 952.46141 0.46140945 4212 Q8IYB8;B7Z611;B1AR60 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes no 0 0 0 4.5 0.5 1 1 39.065 39.131 2 0.015429 9161 20230619_1885_Aki_TMTPro18x_K_F5 93.098 60.956 184430 145410 185300 193810 235250 232240 228470 241110 261950 196670 244640 212930 208190 199430 244400 179810 265720 199180 170500 133530 188940 192250 240020 232150 231800 244450 263990 201740 250090 215070 215540 205040 248670 182360 253580 189220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59821000 19390 4212 18142 36793;36794 29483 29483 1 9606 Homo sapiens -0.016722800046181874 NDLAVVDVR Unmodified 999.53491 0.53490874 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;B3KM80;Q6ZS99;A0A7I2V2S8 NCL Nucleolin yes no 0 0 0 3.5 1.12 1 1 1 1 46.425 46.503 2 9.2529E-07 12385 20230619_1883_Aki_TMTPro18x_K_F4 144.79 70.862 2149300 1885600 1717400 1839300 1850100 2024400 2095700 2120100 2601900 2369800 2516500 2526500 2667700 2458800 2275300 2732700 2636000 2423600 1985000 1725900 1783300 1865200 1919500 2036500 2114300 2165700 2618100 2387200 2592300 2555900 2700800 2551500 2343000 2723600 2517100 2306000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8211799999.999999 19391 1658 18143 36795;36796;36797;36798 29484;29485;29486;29487 29486 4 9606 Homo sapiens 0.035122684378507074 NDLGHPFCNNLR Unmodified 1455.6677 0.6677306 1056 A0A0S2A4E4;A0A0M4G3H8;P35573-2;P35573-3;P35573;G1UI17 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes no 0 0 0 7 0 1 40.945 41.012 3 0.015726 9709 20230619_1887_Aki_TMTPro18x_K_F7 62.891 49.228 45677 33329 38104 38843 41084 45998 47591 45035 68789 52601 54867 43773 54373 46214 45976 50216 57023 56703 42149 30576 39391 38880 42675 45953 48236 46269 68266 52539 56834 44955 55125 47828 47531 50750 54450 53789 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53311000 19392 1056 18144 36799 29488 29488 1 9606 Homo sapiens -0.04187655167811499 NDLSPASSGNAVYDFFIGR Unmodified 2028.9541 0.95411902 260 A0A024R3R5;Q14739;A0A494C1L1 LBR Lamin-B receptor yes no 0 0 0 4.5 3.5 1 1 63.897 63.908 3 4.6483E-31 20075 20230619_1880_Aki_TMTPro18x_K_F1 221.51 193.55 50801 52873 51520 52550 54431 49377 59462 59162 60683 56280 58949 55655 51913 55972 60151 66477 55512 54209 47060 48376 52316 53107 56341 50457 59709 59690 61670 57013 60259 56580 53675 58207 60803 65941 53149 51623 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 382600000 19393 260 18145 36800;36801 29489;29490 29489 2 9606 Homo sapiens -0.01919986975167376 NDLVEALK Unmodified 900.49165 0.49164694 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;Q7L4N0 CAPZB F-actin-capping protein subunit beta yes no 0 0 0 4.5 0.5 1 1 54.192 54.261 2 0.0018045 15909 20230619_1883_Aki_TMTPro18x_K_F4 113.22 90.39 606040 483850 369390 536080 413860 504190 493990 481810 717340 760600 696970 724260 806170 666840 501440 797540 799250 697320 558490 443510 396650 536590 429940 511880 500120 501330 717800 752760 720490 734670 804990 696650 533290 792930 761130 663760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1041699999.9999999 19394 1434 18146 36802;36803 29491;29492 29491 2 9606 Homo sapiens 0.037420786605594 NDLYYNTITNFSEK Unmodified 1720.7944 0.79443049 1003 Q59GQ7;A0A0C4DGA6;Q14527-2;Q14527;A8K5B6;Q05DF7;Q05DQ5;Q05BZ6 HLTF Helicase-like transcription factor yes no 0 0 0 7 0 1 60.323 60.365 3 4.109E-07 17934 20230619_1887_Aki_TMTPro18x_K_F7 137.46 112.28 83450 79506 75842 89452 69995 77091 71301 65840 76645 101880 97849 92741 109880 85183 95166 105080 97181 90632 77185 72841 77654 89357 73223 78684 72027 69059 78765 100730 99883 94305 110980 89196 97193 104450 92918 86260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81056000 19395 1003 18147 36804 29493 29493 1 9606 Homo sapiens -0.03713495252350185 NDMGLECGHK Oxidation (M) 1175.4699 0.469942 1908 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 1 0 3 0 1 33.403 33.469 3 0.0012438 6953 20230619_1882_Aki_TMTPro18x_K_F3 95.094 74.987 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19396 1908 18148 36805 29494 29494 1225 1 9606 Homo sapiens -0.110774174219614 NDMTYNYANR Oxidation (M) 1276.5142 0.51424965 1061 A0A0S2Q0B1;O14497;H0Y488;A0A1B0GTU5;O14497-3;Q96TA9;Q4LE49 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A yes no 0 1 0 4 0 1 34.61 34.661 2 0.0062913 7394 20230619_1883_Aki_TMTPro18x_K_F4 82.75 73.163 12047 11889 11238 11543 13727 14263 15770 14179 15615 15523 18855 20169 19318 17081 12710 18246 21759 15546 11148 10877 11524 11731 14106 14224 15773 14531 16042 15756 19213 20157 19399 17770 13568 18154 20689 14817 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11019000 19397 1061 18149 36806 29495 29495 624 1 9606 Homo sapiens -0.1129469000413792 NDNDNIFLSPLSISTAFAMTK Oxidation (M) 2314.1151 0.1151127 555 A0A3Q8Q4D0;A0A3S8NFS6;A0A0K0Q2Z1;A0A024R944;A0A2S0BDD1;P01008;Q8TCE1;A0A2U8KGL5;Q8IZZ8 SERPINC1;AT3 Antithrombin-III yes no 0 1 0 2 0 1 65.958 65.965 3 0.0278 21187 20230619_1881_Aki_TMTPro18x_K_F2 43.956 33.012 25691 19386 23225 26277 23724 29383 26624 26754 29622 34980 37442 40613 39587 30712 29402 45584 42894 49929 23725 17810 23828 26002 24713 29405 26779 27736 30342 35068 38149 40643 39841 32811 30915 45753 40959 47351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9511000 19398 555 18150 36807 29496 29496 323 1 9606 Homo sapiens 0.010619745559779403 NDNDSWDYTK Unmodified 1256.4946 0.49456007 1144 C9IYN3;A8K894;V9GYK2;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9-4;Q8WVV9;B7WPG3;Q8WVV9-5;A0A0S2Z610;Q8WVV9-3;Q8WVV9-2;H7BXH8 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 0 0 0 3 0 1 46.699 46.777 2 0.043346 12667 20230619_1882_Aki_TMTPro18x_K_F3 70.1 52.368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19399 1144 18151 36808 29497 29497 1 9606 Homo sapiens -0.12342742743248891 NDNPEEHLK Unmodified 1094.4993 0.49925152 4038 Q5JRA6-2;Q5JRA6;A0A0A0MRH6 MIA3 Melanoma inhibitory activity protein 3 yes no 0 0 0 2 0 1 35.694 35.751 3 0.00015496 7972 20230619_1881_Aki_TMTPro18x_K_F2 112.15 83.061 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19400 4038 18152 36809 29498 29498 1 9606 Homo sapiens -0.04421813809813102 NDPQLSLISAMIK Unmodified 1428.7647 0.76465068 2290 B2RAY1;Q92783-2;Q92783;B4DZT2;A6NMU3 STAM Signal transducing adapter molecule 1 yes no 0 0 0 2 0 1 63.511 63.519 3 5.8269E-06 20214 20230619_1881_Aki_TMTPro18x_K_F2 122.78 99.691 26289 21520 23024 22942 22463 30744 27905 23002 37621 31058 24826 26937 34560 29871 26078 38870 33527 39095 24284 19717 23661 23159 23594 30313 28096 24257 37268 30869 26507 27638 34579 31198 27150 38886 32045 37110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33791000 19401 2290 18153 36810 29499 29499 1 9606 Homo sapiens 0.06741894268634496 NDQCYDDIR Unmodified 1197.4721 0.47205049 676 Q9ULV4-3;Q9ULV4-2;Q9ULV4;Q59EA2;A0A024RBI5;B3KN06;Q53G58;B4DMH3;F8VTT6;F8W1H8;F8VVB7;F8VRE9;F8VSA4;F8VUX3 CORO1C Coronin-1C;Coronin yes no 0 0 0 1.5 0.5 1 1 37.13 37.16 2 4.2455E-06 8820 20230619_1880_Aki_TMTPro18x_K_F1 185.6 167.28 270260 203200 206570 227810 256390 261330 258490 266710 352180 349940 384640 368530 390690 354730 309170 405960 436300 364390 249290 186320 215990 228550 262590 261960 263400 274240 354790 349840 393120 372920 394940 368900 323340 404560 415720 346810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 607530000 19402 676 18154 36811;36812 29500;29501 29500 2 9606 Homo sapiens -0.11878665412518785 NDQCYEDIR Unmodified 1211.4877 0.48770055 343 A0A024R5K1;Q9BR76;A0A087WW53;F5H390;Q59F81;B4DIU2;F5H0D2 CORO1B Coronin;Coronin-1B yes no 0 0 0 1 0 1 37.739 37.739 2 0.00028408 9080 20230619_1880_Aki_TMTPro18x_K_F1 162.49 137.11 120120 98132 91840 85338 112220 112920 106790 121420 166960 145060 179470 160410 164110 156790 136030 178830 179780 154820 110850 89768 95892 87729 114910 112400 109880 123980 167060 145870 182670 162160 166800 162880 141460 177910 171420 147400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168260000 19403 343 18155 36813 29502 29502 1 9606 Homo sapiens -0.1095837889545237 NDQDTWDYTNPNLSGQGDPGSNPNK Unmodified 2733.1539 0.15389406 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 0 0 4.25 0.829 1 1 2 52.173 52.232 3;4 1.9708E-14 14707 20230619_1885_Aki_TMTPro18x_K_F5 143.74 136.79 47996 39977 42244 45510 39759 48079 48886 44370 57763 58632 60470 57452 61839 52968 52933 56279 59064 59875 44342 36647 43381 45548 41796 48342 49031 45981 58457 58466 61945 58216 62647 54970 54339 56701 56458 56828 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 566420000 19404 1455;1520 18156 36814;36815;36816;36817 29503;29504 29503 2 9606 Homo sapiens -0.14335673346613476 NDQGESLIR Unmodified 1030.5043 0.5043369 1336 B7ZM73;A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;F8VZV1 MON2 Protein MON2 homolog yes no 0 0 0 2 0 1 37.901 37.964 2 0.040285 8896 20230619_1881_Aki_TMTPro18x_K_F2 68.846 58.42 34468 25132 30425 32455 38596 38806 39438 44782 51141 43902 49599 41051 47197 46206 38839 49775 49766 46623 31819 23079 31376 32265 39463 38898 40080 45279 51347 44347 50783 42029 47900 47654 40304 49759 47488 44327 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41840000 19405 1336 18157 36818 29505 29505 1 9606 Homo sapiens -0.009695099471855428 NDRDVLGISDTLIR Unmodified 1585.8424 0.84238373 3539 P32929-2;P32929-3;P32929 CTH Cystathionine gamma-lyase yes no 0 0 1 5.5 0.5 1 1 53.073 53.147 3 0.021208 15281 20230619_1886_Aki_TMTPro18x_K_F6 61.097 35.379 52137 46741 47261 48915 53786 60122 54457 49944 78775 48330 57317 56888 53471 47078 53794 56934 57849 57000 48201 42804 48524 49384 55434 59731 55589 51702 77905 49268 59643 57051 54736 49392 54937 57054 55304 54141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113390000 19406 3539 18158 36819;36820 29506 29506 1 9606 Homo sapiens 0.07289623458359529 NDSFTTCIELGK Unmodified 1383.634 0.63403044 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 6 0 1 55.382 55.459 3 6.095E-07 16234 20230619_1886_Aki_TMTPro18x_K_F6 128.31 119.36 72539 59589 59342 62893 53412 74992 78866 73400 81561 89064 84151 79808 89344 80124 77078 103790 82092 84854 66976 54592 61346 63434 56777 74860 78108 75506 83077 88888 86414 81495 90466 83852 79024 102790 78516 80785 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103710000 19407 2337;3778;3779 18159 36821 29507 29507 1 9606 Homo sapiens -0.04244121450255989 NDSLAGVVIADNEYPSR Unmodified 1818.8748 0.87480607 1655 A0A7I2V3A1;Q9UES0;A0A7I2V4L6;B5BU81;A4D2J0;A0A7I2V3V7;O15498-2;O15498 YKT6 Synaptobrevin homolog YKT6 yes no 0 0 0 3 0 1 54.932 54.979 2 5.0979E-18 16370 20230619_1882_Aki_TMTPro18x_K_F3 218.28 202.65 14405 10546 11933 12617 9416.8 11718 13206 15053 15107 14248 18073 17032 17854 12075 13784 16699 13870 15612 13292 9677.1 12296 12567 10100 11991 13164 15122 15389 14519 18380 17006 18010 12874 14111 16637 13282 14834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18580000 19408 1655 18160 36822 29508 29508 1 9606 Homo sapiens -0.001876339292493867 NDSVVAGGGAIEMELSK Oxidation (M) 1691.8036 0.80361496 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 1 0 3.5 0.5 1 1 55.495 55.536 3 4.146E-05 16554 20230619_1882_Aki_TMTPro18x_K_F3 93.92 80.257 89808 74156 73041 80874 86107 100980 104570 107280 117090 93432 80327 70699 104390 76889 83619 101440 89469 80230 82919 67955 75862 81421 88992 100730 104700 108740 117090 94522 85131 73097 104730 80456 85811 100310 85483 76461 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153410000 19409 4005 18161 36823;36824 29509;29510 29509 2641 2 9606 Homo sapiens -0.01461469958348971 NDSVVAGGGAIEMELSK Unmodified 1675.8087 0.80870034 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 4 0.816 1 1 1 58.184 58.214 3 1.5824E-23 17555 20230619_1883_Aki_TMTPro18x_K_F4 200.67 185.79 117480 91476 100620 112410 93277 114820 109480 103410 133590 134180 112360 112160 135530 129050 118860 138580 130620 130850 108470 83940 103590 111830 98076 115640 110180 107280 133980 133350 117300 115420 136910 133020 121910 138640 124860 124370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290120000 19410 4005 18161 36825;36826;36827 29511;29512 29512 2 9606 Homo sapiens -0.0021716609571740264 NDSYTLHK Unmodified 976.46141 0.46140945 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8;Q59GS3;J3QSA9;J3KRP2;J3QQM1;J3QRR3;J3QLH6;J3QRW1;A0A994J6H0;J3QSE0;A0A090N8G2;B2R8F2 PSMC5;DKFZp586I1420 26S protease regulatory subunit 8 yes no 0 0 0 5.5 0.5 1 1 37.859 37.943 3 0.0026744 8694 20230619_1886_Aki_TMTPro18x_K_F6 101.97 69.753 86809 50572 77966 90330 97778 108840 101300 107130 115660 81286 100890 92336 95661 91741 90520 53842 121020 97373 80058 46678 80318 88123 100130 108530 102370 108850 116280 83939 103920 93186 97657 92674 93595 57291 115340 92110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108350000 19411 1202 18162 36828;36829 29513 29513 1 9606 Homo sapiens -0.02776280004616183 NDVLDSLGISPDLLPEDFVR Unmodified 2213.1216 0.12157828 107 A0A024R0R4;Q9UBE0;M0QZS6;B4DY66 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes no 0 0 0 5 0 1 66.15 66.193 3 3.4024E-16 20637 20230619_1885_Aki_TMTPro18x_K_F5 156.92 143.49 43162 38749 36881 36786 34784 43986 37796 38617 45633 40964 45451 41954 50041 44730 38155 54521 44429 45596 39887 35458 37958 37435 36450 43821 38191 39881 46025 41329 46804 42686 50380 46542 39446 54088 42457 43397 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47972000 19412 107 18163 36830 29514;29515 29514 2 9606 Homo sapiens 0.06354235778917428 NDVNVEFSEK Unmodified 1179.5408 0.54078198 2079 A8K5T7;Q9Y2Z0;B4DYC6;Q9Y2Z0-2 SUGT1 Suppressor of G2 allele of SKP1 homolog yes no 0 0 0 2.67 0.471 1 2 47.489 47.566 2;3 0.00027294 13337 20230619_1881_Aki_TMTPro18x_K_F2 134.13 115.04 45242 39504 35088 40906 41190 48354 44780 41211 55747 53619 56655 58718 60436 51172 46361 62747 64812 66308 41774 36177 36620 41301 42464 48182 45266 42937 56209 53697 58244 59122 60909 53651 48499 63017 61843 62936 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71894000 19413 2079 18164 36831;36832;36833 29516;29517 29516 2 9606 Homo sapiens -0.041806778411455525 NDVPLPTDSR Unmodified 1112.5462 0.54620171 4461 Q9BX67;Q9BX67-2 JAM3 Junctional adhesion molecule C yes no 0 0 0 2 0.816 1 1 1 41.688 41.734 2 1.9046E-05 10362 20230619_1882_Aki_TMTPro18x_K_F3 160.97 116.55 159800 136690 138010 132490 174330 174950 163670 160220 207280 215100 226790 189370 212420 186410 194290 215620 226240 199010 147640 125120 142490 134810 177910 173500 166990 166100 209540 213710 230850 193420 216450 193910 199760 215240 215970 189300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 128970000 19414 4461 18165 36834;36835;36836 29518;29519 29519 2 9606 Homo sapiens -0.005569542586727039 NDWLDLR Unmodified 930.45593 0.45593014 2945 E9PS41;Q6RFH5;Q6RFH5-2 WDR74 WD repeat-containing protein 74 yes no 0 0 0 4 0 1 55.435 55.447 2 0.067448 16407 20230619_1883_Aki_TMTPro18x_K_F4 73.248 37.755 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19415 2945 18166 36837 29520 29520 1 9606 Homo sapiens -0.012079587964308303 NEAGIVSCTAR Unmodified 1176.5557 0.55572054 844 A0A8J9ASZ5;Q86TC9-2;Q86TC9;A0A087WX60;Q4W5A6;B2RTX2;A0A994J7A4;Q7L8P5;Q8WX93-2;H0YA05;Q8WX93-5;Q8WX93-9;Q8WX93-3;Q8WX93-8;Q8WX93-4;Q8WX93-7;Q8WX93 MYPN;KIAA0992;PALLD;DKFZp586L0518 Myopalladin;Palladin yes no 0 0 0 4 0 1 36.863 36.907 2 0.00080426 8304 20230619_1883_Aki_TMTPro18x_K_F4 108.9 88.348 33482 25784 33456 35132 41314 36717 34100 34619 34626 47111 56247 48354 56487 52349 45968 53037 61541 52729 30948 23687 34099 34726 42023 36983 34849 35846 36157 46970 56636 49200 57175 53885 47822 53258 58670 50118 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15894000 19416 844 18167 36838 29521 29521 1 9606 Homo sapiens -0.02549509244795445 NEAIQAAHDAVAQEGQCR Unmodified 1966.8915 0.89153554 3423 V9HW74;P09936;B2RD14;D6R956;D6R974;A6NLJ7 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 0 0 4 1.29 1 1 2 1 1 43.67 43.744 3 5.3068E-60 11057 20230619_1885_Aki_TMTPro18x_K_F5 307.55 291.91 622850 553600 587200 628470 555490 644800 595290 640190 753040 705300 716700 620280 758900 657070 650730 738340 764240 724570 575970 507350 599220 628930 581160 650770 603060 655950 756780 706960 738120 635240 768240 680940 670330 739690 729840 688490 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 12518000000 19417 3423 18168 36839;36840;36841;36842;36843;36844 29522;29523;29524;29525;29526;29527;29528;29529 29528 8 9606 Homo sapiens -0.05323456314977193 NEAPEGNLGDFAEFQR Unmodified 1792.8016 0.80164113 4678 Q9UKN8;Q05CN7 GTF3C4 General transcription factor 3C polypeptide 4 yes no 0 0 0 2.5 0.5 1 1 55.269 55.3 3 9.849E-34 16503 20230619_1882_Aki_TMTPro18x_K_F3 196.45 192.48 32573 28869 35620 37646 40750 46651 37682 41933 50776 40596 36579 35252 39729 32681 40657 42105 45248 42619 30158 26494 36020 37407 41867 46371 38582 43107 50415 40962 38334 35955 40499 34309 41585 42184 43230 40483 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101280000 19418 4678 18169 36845;36846 29530 29530 1 9606 Homo sapiens -0.06304762651916462 NEAQEEIYKK Unmodified 1250.6143 0.61428128 3869 Q5T0F3;Q13823;B4DPI9 GNL2 Nucleolar GTP-binding protein 2 yes no 0 0 1 4 0 1 41.529 41.572 3 0.00066339 10244 20230619_1883_Aki_TMTPro18x_K_F4 98.156 72.72 43972 36024 41384 36724 38395 48240 41308 42661 52551 58592 62681 65351 62842 53252 51917 56565 63194 57037 40640 32993 42185 37211 40268 47784 41854 44378 53328 58559 63842 65589 63612 55500 53630 56814 60312 54192 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27543000 19419 3869 18170 36847 29531 29531 1 9606 Homo sapiens -0.001001293986746532 NEATVETLTETK Unmodified 1334.6565 0.65654002 3008 G3V529;Q9GZR7;B4DM03;B4DKV2;Q9GZR7-2;Q59FS7;A0A1W2PRR2;F5GYL3;B4E300;Q7Z4W0;A0A087WXU8;Q7Z4X3;B4DGI6 DDX24 ATP-dependent RNA helicase DDX24 yes no 0 0 0 3 0 1 48.883 48.961 3 1.2753E-05 13664 20230619_1882_Aki_TMTPro18x_K_F3 120.87 93.391 177290 154280 164950 202150 202760 236790 238100 226310 327130 183250 214310 204990 222330 165600 203440 211210 211360 184170 163910 141610 169450 200590 208830 236490 240550 230810 323180 188470 225460 205920 225660 174570 207670 210010 201960 175310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 360860000 19420 3008 18171 36848 29532 29532 1 9606 Homo sapiens 0.0025980121902193787 NECVVVIR Unmodified 987.51715 0.51715019 3389 Q53XC0;P05198;H0YJS4;G3V4T5;B4DM12 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 5 0.816 1 1 1 42.018 42.093 2 0.0049663 10481 20230619_1883_Aki_TMTPro18x_K_F4 114.89 84.709 247420 200830 212310 231190 244850 247720 256680 248580 299820 264070 308670 271390 286080 235600 250310 296720 310480 248770 228500 184140 219170 231260 252020 249380 259430 254330 303190 266330 314980 274180 290980 247390 258720 294410 296050 237010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 583400000 19421 3389 18172 36849;36850;36851 29533;29534 29533 2 9606 Homo sapiens 0.022892299113550507 NEDEEEEEEEKDEAEDLLGR Unmodified 2405.983 0.98303171 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 1 1 0 1 55.465 55.465 3 3.3458E-22 16565 20230619_1880_Aki_TMTPro18x_K_F1 174.74 164.34 130970 97010 101310 122490 93609 130300 116980 105070 162280 154300 143700 140300 200900 180650 127750 196890 174960 174480 120810 89060 105430 121660 98843 130530 117950 110450 162080 153030 150700 144510 199860 185820 134170 196160 166940 165960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2916699999.9999995 19422 4746 18173 36852 29535 29535 1 9606 Homo sapiens -0.16372048508628723 NEDFAAHPGEDAVPTGPDCQAK Unmodified 2324.9968 0.99678848 3790 Q02952-3;Q02952-2;Q02952 AKAP12 A-kinase anchor protein 12 yes no 0 0 0 4 0 1 44.821 44.865 3 2.6467E-05 11683 20230619_1883_Aki_TMTPro18x_K_F4 87.772 79.969 8619.5 6123 5739.4 8028.3 5323.3 7431.1 7407 7663.7 5993.6 8072.2 9743.3 8382.5 10136 11084 8525.7 11182 9140.7 10972 7941.6 5624.4 6079.6 7939.7 5633.4 7560.1 7308 7825.9 6339.6 8144.5 9828.2 8599.9 10270 11338 8747.5 11217 8752.5 10417 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12588000 19423 3790 18174 36853 29536 29536 1 9606 Homo sapiens -0.11271004699892728 NEDIIDPVEDR Unmodified 1313.6099 0.60992418 887 Q4W5H4;E0CX15;A0A087X152;A8K385;O95185-2;O95185;D6RE16 UNC5C Netrin receptor UNC5C yes no 0 0 0 1 0 1 47.905 47.905 2 0.0036552 13493 20230619_1880_Aki_TMTPro18x_K_F1 94.791 64.227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19424 887 18175 36854 29537 29537 1 9606 Homo sapiens -0.03433638612227696 NEDLEEIASTDLK Unmodified 1475.6991 0.69913312 3751 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 0 0 2.5 0.5 1 1 58.508 58.53 3 0.013257 18016 20230619_1881_Aki_TMTPro18x_K_F2 63.894 41.361 67992 53647 57894 65894 57220 62284 69474 71121 93637 76276 74752 76162 78077 66156 76645 83763 74428 81222 62779 49224 59691 65503 59874 63466 70069 72185 93223 76834 77744 76991 79515 69503 77884 83731 71280 77147 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29931000 19425 3751 18176 36855;36856 29538 29538 1 9606 Homo sapiens -0.019688484433800113 NEDVCSCSTDTSEVPR Unmodified 1854.736 0.73600568 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 1 0 1 38.375 38.375 2 1.2493E-07 9389 20230619_1880_Aki_TMTPro18x_K_F1 130.07 107.19 7622 4073.7 5186.7 6340 5308.9 7047.3 6026.9 6952.9 7778.7 6652.6 7286.9 8147.4 8318.7 6961.1 5887.9 9630.9 7963 8069.7 7013.9 3754.8 5481.2 6221.7 5543.1 7063.6 6091.3 7099.7 7802.6 6786.3 7547 8166.8 8343.4 7357.2 6165.5 9536.7 7599.6 7680.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27794000 19426 68 18177 36857 29539 29539 1 9606 Homo sapiens -0.15717287951406433 NEDVQLR Unmodified 872.43519 0.4351947 1860;2118 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DQY1;B4E1Q0;E9PPI5;E9PHZ6;A8K8B0;P30154;P30154-2;P30154-4;P30154-5 PPP2R1A;PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform no no 0 0 0 1.5 0.5 1 1 35.075 35.104 2 0.0018026 7728 20230619_1881_Aki_TMTPro18x_K_F2 166.05 51.865 250450 125260 268260 294100 329740 397650 304740 344890 410540 285600 450900 463970 403410 411260 380890 173620 482410 445260 231150 116240 272150 284090 337370 392560 312110 354320 413150 297530 458670 460690 412640 413400 392090 194280 460330 420170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 380830000 19427 1860;2118 18178 36858;36859 29540;29541 29541 2 9606 Homo sapiens -0.006125491760940349 NEEDAAELVALAQAVNAR Unmodified 1882.9385 0.93846896 134 A0A024R1A3;P22314-2;P22314 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 3 0.816 1 1 1 63.186 63.201 3 9.307799999999998E-19 19766 20230619_1882_Aki_TMTPro18x_K_F3 180.1 168.31 26642 28259 24637 32575 26546 35454 38364 27299 29651 33672 35900 40548 37146 37821 35756 29752 36670 43564 24665 25888 25289 32566 27760 35439 37697 28669 30959 33902 36639 40716 37842 38667 36401 30826 35125 41205 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1140800000 19428 134 18179 36860;36861;36862 29542 29542 1 9606 Homo sapiens 0.0323172650782908 NEEDDMREMEEER Oxidation (M) 1726.641 0.64104267 2110 Q53GX6;A8K7Q1;Q02818;B4DZX0;H7BZI1 NUCB1 Nucleobindin-1 yes no 0 1 1 1 0 1 31.853 31.853 3 0.021018 6728 20230619_1880_Aki_TMTPro18x_K_F1 64.675 55.144 10291 8529.2 8737.3 10116 10618 14899 13357 13391 18330 13125 13041 16235 14583 11937 14022 12574 16412 15848 9505.1 7821.9 9048.8 10147 10991 14658 13452 13773 18165 13383 13719 16178 14810 12493 14391 12815 15676 15020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12011000 19429 2110 18180 36863 29543 29543 1330 1 9606 Homo sapiens -0.19321221422592316 NEEDDMREMEEER Unmodified 1710.6461 0.64612804 2110 Q53GX6;A8K7Q1;Q02818;B4DZX0;H7BZI1 NUCB1 Nucleobindin-1 yes no 0 0 1 1 0 1 39.725 39.725 3 0.0018317 9975 20230619_1880_Aki_TMTPro18x_K_F1 80.746 76.644 35405 25794 34170 38523 34544 41790 42002 39379 55413 39802 41101 38908 44921 39617 42198 40228 43805 41898 32706 23726 34855 37881 36103 41929 42309 40418 55071 40220 42997 39571 45611 40875 43033 40522 41884 39784 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42297000 19430 2110 18180 36864 29544 29544 1 9606 Homo sapiens -0.18076917559960748 NEEPSEEEIDAPKPK Unmodified 1710.7948 0.79482442 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 1 2.67 1.25 1 1 1 43.164 43.2 3 2.6103E-08 10993 20230619_1882_Aki_TMTPro18x_K_F3 142.74 131.63 271900 227400 237340 259060 225510 259210 252810 271990 338220 354630 348010 290120 381230 305000 274600 408010 346450 298790 251190 208450 243920 259110 236230 262450 256060 279090 340270 352050 357480 298280 382880 319550 285800 401880 330460 285120 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 191710000 19431 1748 18181 36865;36866;36867 29545;29546;29547 29546 3 9606 Homo sapiens -0.03214120323150382 NEEPVRSPER Unmodified 1211.5895 0.58946351 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 1 1 0 1 27.578 27.578 3 0.001709 5030 20230619_1880_Aki_TMTPro18x_K_F1 91.549 30.761 10264 6361.8 10763 11555 18615 16546 12555 16979 18621 11039 17183 18116 12813 14313 15471 10410 22020 17365 9480.5 5871.5 11008 11300 18531 16360 13206 17141 18538 11699 17514 17936 13374 14672 16015 10932 20973 16437 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12159000 19432 4016 18182 36868 29548 29548 1 9606 Homo sapiens -0.007867644814041341 NEFIPTNFEILPLEK Unmodified 1802.9455 0.94545182 1507 P14735;A0A7I2V610;A0A3B3ISG5;A0A7I2V2P6;A0A7I2V3E3;A0A7I2YQV5;Q59GA5;A0A7I2V4Q3;A0A7I2V2S1;A0A7I2V612;A0A7I2V373;A0A7I2YQS6 IDE Insulin-degrading enzyme yes no 0 0 0 7 0 1 64.531 64.56 3 3.1235E-05 19897 20230619_1887_Aki_TMTPro18x_K_F7 96.993 82.735 87660 72077 88413 83316 78265 85263 83902 100790 101720 108060 82159 87781 95097 85410 89912 119410 95059 92368 81065 66086 89555 83305 82263 86445 84892 102010 101960 108170 85833 89961 96452 89935 91970 117850 90883 88028 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170570000 19433 1507 18183 36869 29549 29549 1 9606 Homo sapiens 0.07609691126299367 NEFTITHVLIPK Unmodified 1410.7871 0.78710068 1231 O95630;A0A804HJ64;A0A804HL27;A0A140VK54;A0A804HKA6;A0A804HJS0;A0A804HHU9;A0A804HIJ2;A0A804HII8;A0A804HHV2;F5H5B9;A0A804HJC8;A0A804HI64;A0A804HIF8;C9JK83;O95630-2 STAMBP STAM-binding protein yes no 0 0 0 2 0 1 56.551 56.569 3 1.9421E-05 17205 20230619_1881_Aki_TMTPro18x_K_F2 124.86 98.733 60024 51261 58942 56829 53036 61058 62576 64418 70075 65761 67171 69522 80254 65139 73881 82397 70292 82539 55509 46975 59866 57026 55837 61507 62795 65606 70854 66507 69653 70287 81161 68266 75093 82506 67375 78349 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67575000 19434 1231 18184 36870 29550 29550 1 9606 Homo sapiens 0.09813861728548545 NEGNIFPNPEATFVK Unmodified 1675.8206 0.82058566 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 6.5 1.12 1 1 1 1 60.672 60.718 3 1.3533E-10 18409 20230619_1886_Aki_TMTPro18x_K_F6 153.2 135.98 308310 258690 278280 291090 253740 283500 317870 320010 340250 338170 335540 310330 354630 324580 311230 371460 364410 364760 284900 237110 284910 291370 267300 288160 317530 324870 345220 339950 345150 316960 359470 336760 320510 372000 348150 346520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 970600000 19435 4746 18185 36871;36872;36873;36874 29551;29552 29551 2 9606 Homo sapiens 0.009708187097885457 NEGSESAPEGQAQQR Unmodified 1586.6921 0.69209068 3745 P67809;H0Y449;A0JLU4;Q6PKI6;Q2VIK8;C9J5V9 YBX1 Nuclease-sensitive element-binding protein 1 yes no 0 0 0 1 0 1 28.257 28.257 3 1.7877E-08 5294 20230619_1880_Aki_TMTPro18x_K_F1 142.95 137.95 9620 4174.4 6221.2 11051 14949 12967 10665 15898 14183 11766 14264 15950 14390 15269 12137 6882.5 14632 13566 8843.2 3886.7 6758.3 10601 14709 13026 11115 15911 14250 12238 14644 15959 14596 15323 12488 7448.2 13968 12818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113320000 19436 3745 18186 36875 29553 29553 1 9606 Homo sapiens -0.07778768271214176 NEGTATYAAAVLFR Unmodified 1482.7467 0.74669243 173 A0A0S2Z487;A0A024R1X8;P14923;A0A0S2Z495 JUP Junction plakoglobin yes no 0 0 0 1 0 1 58.699 58.699 2 7.8606E-16 17990 20230619_1880_Aki_TMTPro18x_K_F1 234.92 199.41 41485 36532 39312 41407 51591 46093 45421 48375 63174 52590 50240 41228 51716 44133 41492 52170 49193 49884 38362 33481 40297 41494 52402 46346 46698 49351 62832 52609 52140 42504 52261 45865 42857 52139 46998 47402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68051000 19437 173 18187 36876 29554 29554 1 9606 Homo sapiens 0.024628953380897656 NEHSYCTMIR Oxidation (M) 1325.5493 0.54925495 4345 Q96EY7 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 0 1 0 4 0 1 30.446 30.513 3 0.0021541 5759 20230619_1883_Aki_TMTPro18x_K_F4 78.903 58.807 15176 5226.3 16710 16426 22775 19540 22206 22712 20024 17831 22962 18136 20659 18857 15534 16365 20665 19941 13994 4894.3 16933 15693 23101 19583 22357 22845 20629 18291 23282 18441 20923 19298 16173 16687 19717 18905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28304000 19438 4345 18188 36877 29555 29555 2740 1 9606 Homo sapiens -0.1004977046784461 NEIASVAYR Unmodified 1021.5193 0.51925868 3242 O15371-2;O15371-3;O15371;B4E1K8 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 0 6 0 1 42.113 42.207 2 0.0025713 10430 20230619_1886_Aki_TMTPro18x_K_F6 105.2 82.958 43121 31262 45271 44807 54508 60424 57416 54909 67747 58253 66341 68866 79745 77228 48848 98246 107200 124870 39861 28743 45953 44330 55969 59771 58028 56561 68357 59065 68695 69799 79635 80503 53713 99699 102130 118260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42444000 19439 3242 18189 36878 29556 29556 1 9606 Homo sapiens 0.009359819208043518 NEIDNYEEDYQK Unmodified 1558.6423 0.64234652 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1 0 1 48.204 48.204 2 2.0066E-05 13640 20230619_1880_Aki_TMTPro18x_K_F1 158.4 140.96 11919 8896.3 10365 12538 7453.4 13960 10222 14244 16080 15837 13865 25328 28043 23633 13511 31917 28934 37668 11003 8176.7 10634 12376 8108.3 13994 10338 14567 15980 16211 15011 25213 27500 24876 14949 32198 27595 35684 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19293000 19440 2337;3778;3779 18190 36879 29557 29557 1 9606 Homo sapiens -0.11462895999898137 NEILQGK Unmodified 800.43922 0.43921744 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;Q14980-5;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 5.5 0.5 1 1 44.001 44.087 2 0.02501 11269 20230619_1886_Aki_TMTPro18x_K_F6 98.458 11.664 322320 205030 304220 310120 358650 384270 341010 362800 476590 348040 468560 458940 420500 426480 360320 261380 513160 407600 297490 188740 311370 305420 367950 382330 349100 371660 476910 356230 478800 459500 428410 432100 375260 273970 488780 385980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 248410000 19441 349;3906 18191 36880;36881 29558 29558 1 9606 Homo sapiens 0.03101540317618401 NEILTAILASLTAR Unmodified 1484.8562 0.85624288 1260 A0A1B0GVH5;A0A1B0GTC3;B3KU60;Q9C0B1;A0A1B0GUC3;A0A1B0GU26;A0A1B0GTC5;A0A1B0GV98;B4DHN4;A0A1B0GUY7;A0A1B0GTI3;Q9C0B1-4;Q9C0B1-2;A0A1B0GTZ8;X6R3I0 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes no 0 0 0 6.5 0.5 1 1 67.652 67.684 3 1.1104E-06 21417 20230619_1886_Aki_TMTPro18x_K_F6 122.93 76.225 4294.1 4601.6 4530.8 4811.5 5221.9 4565 6178.2 6337.3 7230.1 4170.6 4955.5 4167.1 5217.5 4796.7 5571.9 5051.7 4451.3 4161.5 3980.1 4211.7 4594.7 4843.3 5385 4680.1 6203.7 6292.9 7203.8 4335.7 5199.4 4259.2 5335.4 4937.6 5594.9 5025.6 4267.8 3963.1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 16058000 19442 1260 18192 36882;36883 29559;29560 29559 2 9606 Homo sapiens 0.13320900957455706 NEIPHSCGEVCR Unmodified 1456.6187 0.6187315 3828 Q12986-2;Q12986;A0JLR2;Q12986-3 NFX1 Transcriptional repressor NF-X1 yes no 0 0 0 3 0 1 32.847 32.918 3 0.00090444 6743 20230619_1882_Aki_TMTPro18x_K_F3 89.44 67.883 13756 11126 14659 15403 16254 17300 19055 17152 20152 16110 18255 18752 17069 14835 16096 16489 21369 17748 12726 10221 14847 15226 16821 17344 19077 17511 20375 16423 18771 18782 17421 15517 16676 16614 20369 16857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25008000 19443 3828 18193 36884 29561 29561 1 9606 Homo sapiens -0.09131311519058727 NEIPNSHILDQYR Unmodified 1597.7849 0.78486885 3548 P35520;P35520-2;B7Z2D6;B7Z6W5;Q9NTF0 CBS;DKFZp727E011 Cystathionine beta-synthase yes no 0 0 0 5.5 0.5 1 1 46.95 47.03 3 4.9075E-07 12597 20230619_1886_Aki_TMTPro18x_K_F6 144.09 112.91 222620 176010 211140 207980 184840 230440 211110 211130 272440 243680 253690 280040 275400 257130 237580 262040 285950 279590 205720 161440 215040 207760 195120 230850 213290 217920 273260 245740 262260 281740 278790 266150 245040 264200 273090 265400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 256420000 19444 3548 18194 36885;36886 29562;29563 29563 2 9606 Homo sapiens 0.009887812528177164 NEIVFPAGILQAPFYTR Unmodified 1935.0254 0.025433475 615 B4DKB2;A0A024RAB0;A0A024RAB2;A1PUP8;A0A3B3ISF9;P42892-3;P42892-2;P42892-4;P42892 ECE1 Endothelin-converting enzyme 1 yes no 0 0 0 4 0 1 64.702 64.711 3 2.9815E-06 20272 20230619_1883_Aki_TMTPro18x_K_F4 104.45 85.126 10999 7695.3 9998.4 10832 8061.5 12020 12666 12812 13640 12463 12408 16174 16116 15403 14798 16748 17462 17793 10153 7074.8 10222 10695 8676.1 12070 12533 13025 13790 12729 12980 16218 16283 15976 15227 16863 16684 16888 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12770000 19445 615 18195 36887 29564 29564 1 9606 Homo sapiens 0.09532177520168261 NELEIPGQYDGR Unmodified 1389.6525 0.6524577 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2 0 1 49.145 49.21 2 6.7787E-06 14032 20230619_1881_Aki_TMTPro18x_K_F2 164.04 115.4 115690 104300 114020 133520 117020 130890 133860 138940 146120 161260 166960 166320 180510 152030 155350 187060 180510 170590 107030 95698 116140 132390 121770 132740 134410 141980 149080 161890 170900 168170 182610 159130 159970 186420 172390 162240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 366150000 19446 3758 18196 36888 29565 29565 1 9606 Homo sapiens -0.026782434840015412 NELESYAYSLK Unmodified 1315.6296 0.62959699 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 6 0.816 1 1 1 58.501 58.558 2 4.845E-06 17215 20230619_1887_Aki_TMTPro18x_K_F7 176.8 106.85 216440 187360 197930 235460 212690 234500 252900 251700 281540 305910 283740 306600 318070 278000 294460 370630 326480 351780 200070 171900 203080 233810 220870 237610 253530 257400 285500 306220 292700 310280 322510 292560 302040 369670 312240 334230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 912530000 19447 3429 18197 36889;36890;36891 29566;29567;29568 29568 3 9606 Homo sapiens -0.015592626014949929 NELFLPGR Unmodified 944.50797 0.50796571 2227 Q9H4P6;E7EQZ7;Q9UK43;Q95HA6;B2R5Y4;Q13123;B4DEH2 IK;CSA2 Protein Red yes no 0 0 0 7 0 1 50.228 50.309 2 0.018192 13706 20230619_1887_Aki_TMTPro18x_K_F7 96.711 74.563 265870 236310 237540 270600 243930 294040 291420 314900 394520 321270 321310 341080 362850 275910 301740 385600 374380 369850 245760 216580 244010 270840 254570 296010 294230 320340 392980 325040 334990 343220 366000 292670 312370 384580 357470 351470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220670000 19448 2227 18198 36892 29569 29569 1 9606 Homo sapiens 0.03349204617347823 NELLPSHPLELSEK Unmodified 1604.841 0.84098675 1816 A0A8V8TMM8;A0A8V8TLM3;Q9Y244 POMP Proteasome maturation protein yes no 0 0 0 6 0 1 52.225 52.302 3 2.806E-05 14889 20230619_1886_Aki_TMTPro18x_K_F6 109.48 87.003 99972 90285 112160 111460 99811 108570 108070 113540 122570 118010 91457 77246 119090 88475 94184 117210 92445 93824 92594 82806 112720 110810 104840 110130 108980 115740 122900 117810 96404 80719 119400 92484 96243 115950 88477 89358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65732000 19449 1816 18199 36893 29570 29570 1 9606 Homo sapiens 0.06275989369623858 NELSGALTGLTR Unmodified 1230.6568 0.65681479 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 4.5 3.5 1 1 53.598 53.633 2 4.1303E-13 15084 20230619_1888_Aki_TMTPro18x_K_F8 228.74 188.39 376950 354020 326910 357350 282550 328240 344420 355050 382820 482680 480690 471660 489220 421750 450650 527340 459660 496110 348500 324060 335770 360480 298930 334950 345090 364280 392140 480420 488900 477650 497160 442230 459880 526280 439960 471400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 863340000 19450 2326 18200 36894;36895 29571;29572 29572 2 9606 Homo sapiens 0.05071265729543484 NEMMSPLLK 2 Oxidation (M) 1093.5148 0.51476693 4817 yes no 0 2 0 8 0 1 51.383 51.46 2 0.092962 14145 20230619_1888_Aki_TMTPro18x_K_F8 42.109 8.0311 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19451 4817 18201 36896 29573 29573 2924;2925 1 9606 Homo sapiens -0.028249866086298425 NENEEILERPAQLANAR Unmodified 1965.9868 0.98681614 3999 Q53GG0;Q9UHB6;F8VQE1;B4DN52;Q9UHB6-2;Q9UHB6-4;F8VS07;B3KTW2;Q9UHB6-3;Q9UHB6-5 LIMA1 LIM domain and actin-binding protein 1 yes no 0 0 1 3 0 1 45.397 45.473 3 2.9821E-71 12053 20230619_1882_Aki_TMTPro18x_K_F3 266.28 229.24 137680 105550 122420 119490 88646 102230 104490 112020 130700 147960 119230 105460 154620 104440 107740 177950 142100 121640 127150 96781 125080 119370 95296 104950 105340 114710 131390 146290 124270 109080 154320 111730 112660 174270 135490 116210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 245840000 19452 3999 18202 36897 29574 29574 1 9606 Homo sapiens 0.04246220147751956 NENLAANFLLQQNFDED Unmodified 1993.9017 0.9017491 3653 P54727;Q53F10;B7Z4W4;P54727-2 RAD23B UV excision repair protein RAD23 homolog B yes no 0 0 0 3 1.41 1 1 1 1 1 65.164 65.183 3 1.0414E-05 20619 20230619_1882_Aki_TMTPro18x_K_F3 74.772 70.666 15047 11677 14924 18541 12760 15741 16326 13836 17195 17646 19625 20447 19819 18346 19057 20048 22330 23300 13908 10747 15162 18107 13532 16076 16282 14389 17564 17718 20037 20556 20198 19081 19578 20299 21340 22092 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152840000 19453 3653 18203 36898;36899;36900;36901;36902 29575;29576 29575 2 9606 Homo sapiens -0.055445701087364796 NENNSHAFIR Unmodified 1200.5636 0.56358311 4592 Q9NTI5-2;Q9NTI5;B7Z5S1 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 0 0 0 4.5 0.5 1 1 30.559 30.631 3 2.5435E-14 5904 20230619_1885_Aki_TMTPro18x_K_F5 206.24 164.8 17104 17208 18223 18686 22911 26210 22128 20691 28658 24479 28703 27160 24519 25377 21005 27937 29575 29036 15846 15758 18494 18850 23420 25809 22553 21620 28808 24637 29245 27400 25030 26350 21932 28075 28210 27569 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95807000 19454 4592 18204 36903;36904 29577 29577 1 9606 Homo sapiens -0.0286761393301731 NENPVDYTVQIPPSTTYAITPMK Oxidation (M) 2594.2574 0.25741984 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;Q59GP7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 1 0 7 0 1 60.965 61.007 3 1.3224E-06 18207 20230619_1887_Aki_TMTPro18x_K_F7 96.303 88.311 12076 14709 12854 15036 15644 14242 14027 16122 13855 18912 21239 16913 18631 17684 19168 21889 20177 21280 11207 13455 13043 15156 15956 14523 14247 16408 14437 18891 21302 17310 19132 18432 19554 21887 19303 20214 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34579000 19455 3823 18205 36905 29578 29578 2504 1 9606 Homo sapiens 0.024061425074705767 NENPVDYTVQIPPSTTYAITPMK Unmodified 2578.2625 0.26250522 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;Q59GP7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 8 0 1 62.036 62.064 3 2.3578E-08 18624 20230619_1888_Aki_TMTPro18x_K_F8 101.33 89.387 50456 45610 50676 51603 42763 52710 52309 50940 51259 72232 67142 62784 70154 66112 64459 73865 69508 68863 46688 41797 51353 51655 45329 53182 52189 52731 53010 71545 68248 64283 71271 68472 65977 73805 66452 65462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 468780000 19456 3823 18205 36906 29579 29579 1 9606 Homo sapiens 0.0365044637005667 NENTEGSPQEDGVELEGLK Unmodified 2043.9233 0.92327241 3433 P11388;P11388-2;P11388-3;P11388-4 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 1.5 0.5 1 1 52.512 52.528 3 2.2532E-10 15389 20230619_1880_Aki_TMTPro18x_K_F1 131.94 116 33409 25102 28324 28021 21916 30727 26296 24399 36357 38137 39954 34483 46469 40433 30056 46811 40197 42652 30838 23016 29101 28102 23474 30717 26581 25737 36624 37719 41045 35407 46450 41845 31505 46657 38380 40546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 287660000 19457 3433 18206 36907;36908 29580 29580 1 9606 Homo sapiens -0.05693229870712457 NENTFLDLTVQQIEHLNK Unmodified 2155.0909 0.090946857 1248 Q16851-2;A0A140VKE1;A0A7I2YQ74;Q16851;E7EUC7;B4DUP2;A0A087WYS1;B2RAN1;Q53QE9;A0A7I2V676;C9JNZ1;A0A7I2V4T0;C9JVG3;C9JWG0;C9JQU9 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes no 0 0 0 7 0 1 63.234 63.266 3 0.00010532 19327 20230619_1887_Aki_TMTPro18x_K_F7 87.654 69.264 45778 36044 39779 48257 41534 45744 44781 49387 53013 49997 48692 51265 55894 49513 47815 62850 55675 62754 42274 33102 40984 47686 43115 46524 45232 50214 53381 50537 50491 51947 56458 51830 49284 62891 53243 59579 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153230000 19458 1248 18207 36909 29581 29581 1 9606 Homo sapiens 0.059605021845982264 NEPFVFSLGK Unmodified 1136.5866 0.58660996 3853 Q53GX4;Q2TA84;Q13451;B7Z8G2;Q6ZR21;Q13451-2 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes no 0 0 0 1 0 1 61.716 61.716 3 0.0031785 19175 20230619_1880_Aki_TMTPro18x_K_F1 75.819 50.965 37086 29828 33280 40152 28982 36828 37639 36885 46768 45014 46110 42692 45434 48547 41575 51374 44493 48895 34260 27393 34107 39644 30736 37478 37733 37907 47093 45007 47284 43665 46277 49990 42563 51420 42573 46450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17517000 19459 3853 18208 36910 29582 29582 1 9606 Homo sapiens 0.023780121317713565 NEPQNATGAPGR Unmodified 1210.5691 0.56906242 164 A0A024R1U4;P51148;P51148-2 RAB5C Ras-related protein Rab-5C yes no 0 0 0 2 0 1 28.842 28.914 2 0.0040693 5329 20230619_1881_Aki_TMTPro18x_K_F2 85.958 52.161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19460 164 18209 36911 29583 29583 1 9606 Homo sapiens -0.027799351412113538 NEQDAYAINSYTR Unmodified 1543.6903 0.69029976 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHJ0;A0A5F9ZHD4;A0A5F9ZI66 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 44.122 44.179 2 1.4746E-35 11438 20230619_1882_Aki_TMTPro18x_K_F3 269.44 247.93 193070 172340 185900 211820 197260 219740 227550 231750 236630 282700 316120 312820 340080 299140 283150 362160 371480 350080 178570 158060 189790 210780 204800 221890 228040 237280 243880 283800 321580 315890 343740 312270 294230 362020 354420 332710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 612420000 19461 1208 18210 36912;36913 29584;29585 29584 2 9606 Homo sapiens -0.059797772891897694 NESTPPSEELELDK Unmodified 1586.7312 0.73116153 4150 Q7L0Y3;C9JVB6 TRMT10C Mitochondrial ribonuclease P protein 1 yes no 0 0 0 1 0 1 49.651 49.651 3 0.00026159 14203 20230619_1880_Aki_TMTPro18x_K_F1 104.26 91.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19462 4150 18211 36914 29586 29586 1 9606 Homo sapiens -0.038734807602168075 NETDEDGWTTVRR Unmodified 1577.707 0.70701246 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 2 0 1 37.771 37.834 3 0.04736 8826 20230619_1881_Aki_TMTPro18x_K_F2 47.227 40.339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19463 3152 18212 36915 29587 29587 1 9606 Homo sapiens -0.05873276403281125 NETGGGEGIEVLK Unmodified 1301.6463 0.64630969 3601 P48739;P48739-2;P48739-3;B2R7P6;B3KYB7 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 0 0 2.5 0.5 1 1 49.305 49.363 3 3.0071E-06 14123 20230619_1881_Aki_TMTPro18x_K_F2 134.04 99.156 134390 103270 111580 115980 129350 153960 147180 149120 203360 155900 168420 152880 194050 162590 144880 199780 188270 182610 124050 94689 115570 116620 133670 152670 149040 152790 202460 157250 175390 155840 194940 169360 150890 199040 179680 173640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 282310000 19464 3601 18213 36916;36917 29588;29589 29588 2 9606 Homo sapiens 0.007552382845005923 NETGGGEGVEVLVNEPYEK Unmodified 2018.9433 0.94327957 3771 V9HWC5;Q00169;Q6NUL6;I3L471;I3L4U7 HEL-S-36;PITPNA Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 2 0 1 55.167 55.187 3 2.3296E-08 16663 20230619_1881_Aki_TMTPro18x_K_F2 117.55 106.25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19465 3771 18214 36918 29590 29590 1 9606 Homo sapiens -0.02543434140102363 NETSAPFK Unmodified 892.42905 0.42904669 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 5.5 0.5 1 1 42.056 42.145 2 0.0017242 10383 20230619_1886_Aki_TMTPro18x_K_F6 149.82 100.72 231480 156160 203790 225380 283950 288910 273160 250760 368340 222530 244580 219950 243840 211120 282590 170900 287200 230930 213590 143630 210650 222640 288340 286430 278750 258090 364470 226720 256660 223080 250820 216050 286260 176140 274360 218900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 216720000 19466 3402 18215 36919;36920 29591;29592 29592 2 9606 Homo sapiens -0.021470674076113028 NETYNSHPLLVK Unmodified 1413.7252 0.72522871 4259 Q8NI27;A0A0C4DG98;B4DKZ6 THOC2 THO complex subunit 2 yes no 0 0 0 7.5 0.5 1 1 43.768 43.813 3 6.7819E-06 11033 20230619_1888_Aki_TMTPro18x_K_F8 138.87 87.652 62070 54444 56083 60490 53368 55570 63519 58501 77011 83645 78971 66041 77776 69330 67443 85253 77886 73701 57375 49889 57452 60553 55925 56672 63870 60246 77810 82658 80779 67994 78954 72238 69438 84723 74391 70139 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102040000 19467 4259 18216 36921;36922 29593 29593 1 9606 Homo sapiens 0.0349151030941357 NEVDLVVHSLK Unmodified 1251.6823 0.68230126 1501 A0A8I5KXV4;F5H345;A0A3B3IRR1;A0A3F2YNY7;P08397-4;P08397-3;P08397-2;P08397;A0A3B3IU56;F5GY90;A0A1W2PNU5;A0A3B3IU34;F5H0P4 HMBS Porphobilinogen deaminase yes no 0 0 0 7 0 1 54.341 54.404 3 0.021771 15507 20230619_1887_Aki_TMTPro18x_K_F7 59.607 29.623 56333 50447 53930 55875 51564 57722 58345 59196 74779 64625 67001 65436 71737 63409 71628 83304 73982 72855 52102 46221 54960 56032 53966 58279 58949 60518 74915 65074 69316 66373 73085 66500 73034 82776 70755 69313 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 352510000 19468 1501 18217 36923 29594 29594 1 9606 Homo sapiens 0.06652740252002332 NEYSLTGLCNR Unmodified 1325.6034 0.60339901 4467 Q9BXY0;A0PJ56;H0YBV6 MAK16 Protein MAK16 homolog yes no 0 0 0 6.5 0.5 1 1 46.726 46.814 2 1.9182000000000003E-24 12521 20230619_1886_Aki_TMTPro18x_K_F6 245.08 230.87 112610 95342 95639 96259 100240 120830 118030 116500 139450 125550 64061 63147 148660 73171 68435 144150 138410 127260 104020 87303 98660 97526 104380 120240 118580 119490 138040 124550 72895 67355 144980 79203 75264 142490 131670 121090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86377000 19469 4467 18218 36924;36925 29595;29596 29595 2 9606 Homo sapiens -0.046378550446206646 NFAELAR Unmodified 819.4239 0.42390173 737 A0A024RCX8;Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase-like 1 yes no 0 0 0 5.5 0.5 1 1 44.822 44.905 2 0.059596 11629 20230619_1886_Aki_TMTPro18x_K_F6 81.89 41.204 431070 352640 371130 397450 471900 489380 466670 474400 529360 474740 539290 457690 501460 446880 434560 569430 595360 494960 398140 323260 383650 399010 482000 487700 472760 485550 535940 479400 550550 465630 510130 467620 452650 565710 567390 471280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 547160000 19470 737 18219 36926;36927 29597 29597 1 9606 Homo sapiens 0.006966735204173347 NFAEPGSEVYLR Unmodified 1380.6674 0.66737948 1056 A0A0S2A4E4;A0A0M4G3H8;P35573-2;P35573-3;P35573;G1UI17 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes no 0 0 0 4 0 1 50.974 51.006 2 1.0123E-17 14440 20230619_1883_Aki_TMTPro18x_K_F4 190.26 153.56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19471 1056 18220 36928 29598 29598 1 9606 Homo sapiens -0.007727516160002779 NFAFLEFR Unmodified 1042.5236 0.52361577 2658 B5BU25;P26368-2;P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 0 0 0 2 0.816 1 1 1 62.227 62.24 2 0.0027444 19608 20230619_1881_Aki_TMTPro18x_K_F2 137.62 114.06 890620 762440 812440 852420 761210 924690 874850 855000 1146100 739820 726860 671970 726230 671710 1015200 842010 782850 735960 823170 698750 831360 854650 799090 927950 883670 875360 1134200 752800 765760 685850 755340 701570 1013500 838110 750940 700320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 354560000 19472 2658 18221 36929;36930;36931 29599 29599 1 9606 Homo sapiens 0.004054911343473577 NFAIGYYLK Unmodified 1087.5702 0.57023162 3339 O94925-3;B3KM58;A8K132;O94925;Q68D38;Q53S89 GLS;DKFZp686O15119 Glutaminase kidney isoform, mitochondrial yes no 0 0 0 4 0 1 61.51 61.514 2 0.0033256 18943 20230619_1883_Aki_TMTPro18x_K_F4 95.815 56.797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19473 3339 18222 36932 29600 29600 1 9606 Homo sapiens 0.029949309656331025 NFALLGVGTSK Unmodified 1105.6132 0.61315906 1889 A1LT96;A0AVT1;B3KSS1;A0AVT1-2;H0Y8S8 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 0 4 0 1 58.49 58.493 2 3.0404E-05 17759 20230619_1883_Aki_TMTPro18x_K_F4 143.96 100.71 22304 26987 27852 27080 26719 33368 29090 25721 35288 32029 34985 36635 36584 28740 33064 34177 36173 38205 20728 24683 27816 27435 27929 33097 29385 26987 35578 32186 35988 36704 37105 30208 33861 34481 34594 36237 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31627000 19474 1889 18223 36933 29601 29601 1 9606 Homo sapiens 0.06457701023077789 NFDEILR Unmodified 905.46068 0.46068117 3527 V9HWC7;P30041;A4UCS6 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 0 3.5 1.12 1 1 1 1 52.047 52.097 2 0.0041821 14649 20230619_1885_Aki_TMTPro18x_K_F5 149.99 91.417 1817100 1456800 1555500 1848100 1992800 2348700 2109900 2173600 2460400 2336200 2402000 2573800 2620700 2219800 2530500 2721800 2644100 2795700 1678000 1337000 1610600 1840200 2040700 2332400 2131000 2236400 2484700 2359800 2478300 2590000 2663500 2328100 2582200 2730700 2529800 2654100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5617200000 19475 3527 18224 36934;36935;36936;36937 29602;29603;29604 29604 3 9606 Homo sapiens 0.004169253463373934 NFDFEDVFVK Unmodified 1258.587 0.58700389 1508 Q9BTT5;A0A3B3ISG8;Q16795 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 5.5 0.5 1 1 63.352 63.399 3 0.0001005 19641 20230619_1886_Aki_TMTPro18x_K_F6 129.88 105.09 150740 126240 150140 163450 181130 209970 180020 173670 208780 150830 163240 142700 181820 158270 158190 175160 158370 166230 139400 115870 153140 162560 185770 207900 182410 179330 209100 153600 170300 145930 183890 163630 161380 175220 151580 157950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 235860000 19476 1508 18225 36938;36939 29605;29606 29606 2 9606 Homo sapiens -0.03194612939068975 NFDLRPGVIVR Unmodified 1284.7303 0.73025451 1192 A0A140VJP5;P31153;B4DEX8;P31153-2;B4E1K2;B4DN74;B4DFQ8;A8K455;Q00266 MAT2A;MAT1A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase;S-adenosylmethionine synthase isoform type-1 yes no 0 0 1 3.5 0.5 1 1 48.488 48.547 3 2.7961E-12 13281 20230619_1883_Aki_TMTPro18x_K_F4 170.4 147.91 601230 494490 497640 557040 484460 574150 496700 521860 660220 606290 557000 509810 618710 535600 539050 742560 630190 591940 555160 453280 514250 557710 505480 578170 505300 538980 659370 605580 578650 523320 625950 562410 555700 733850 601820 563970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1057699999.9999999 19477 1192 18226 36940;36941 29607;29608 29608 2 9606 Homo sapiens 0.09927858962669234 NFDQEGLVEHCK Unmodified 1474.6511 0.65107749 913 A0A096LNV3;A0A096LP02;Q9Y508-2;Q9Y508;H0UI65;B4DLW5 RNF114;ZNF313 E3 ubiquitin-protein ligase RNF114 yes no 0 0 0 3.5 0.5 1 1 43.982 44.052 3 4.2243E-13 11400 20230619_1882_Aki_TMTPro18x_K_F3 197.13 168.84 111740 83500 93208 99865 81743 94575 94478 94674 123030 145850 148080 145630 165370 148610 128130 180560 151460 169360 103130 76613 96088 99458 86289 96058 95453 98090 124830 144650 151440 148000 166520 154840 132540 180150 144810 160920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161800000 19478 913 18227 36942;36943 29609;29610 29609 2 9606 Homo sapiens -0.06726200844423147 NFDREIGHK Unmodified 1114.552 0.55195579 198 A0A024R2F9;Q9BTV4;A0A0S2Z5N2 TMEM43 Transmembrane protein 43 yes no 0 0 1 6 0 1 36.324 36.385 4 0.031105 8126 20230619_1886_Aki_TMTPro18x_K_F6 58.699 23.188 30840 22365 28096 27702 45456 34650 29157 31344 38920 28026 32627 33297 29884 23342 30597 34679 37996 33246 28476 20530 29000 27631 45308 34477 30650 32154 38830 28678 33657 33241 30621 25008 31530 34573 36250 31610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20055000 19479 198 18228 36944 29611 29611 1 9606 Homo sapiens -0.000738109563371836 NFDRENVR Unmodified 1048.505 0.5050056 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 1 3.5 0.5 1 1 30.451 30.545 3 0.00044676 5805 20230619_1882_Aki_TMTPro18x_K_F3 147.51 109.42 69344 55404 65743 57500 77648 71067 69255 69664 84330 79180 85791 76845 80641 68254 67156 84485 96876 67680 64084 50755 67188 58131 79401 70870 70799 71497 85117 79454 87643 77868 81854 71523 70250 83660 92201 64568 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64098000 19480 817 18229 36945;36946 29612;29613 29612 2 9606 Homo sapiens -0.01730670507481591 NFDVGHVPIR Unmodified 1152.604 0.60399136 1169 F8VQZ7;A0A140VJE3;P50579-2;P50579;F8VRR3;P50579-3;Q96B43 METAP2 Methionine aminopeptidase 2;Methionine aminopeptidase yes no 0 0 0 7.5 0.5 1 1 43.99 44.04 3 0.00013357 10976 20230619_1887_Aki_TMTPro18x_K_F7 108.7 56.842 37398 30719 38981 42125 50456 56931 47337 50632 74013 37034 35876 34913 32222 31270 44075 46253 42230 41266 34594 28215 39662 41782 51473 56279 48701 51776 72256 38176 38455 35458 33617 33146 44522 45952 40416 39251 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271800000 19481 1169 18230 36947;36948 29614 29614 1 9606 Homo sapiens 0.03379352457409368 NFEATLGWLQEHACSR Unmodified 1917.8792 0.87917994 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;A0A6I8PIP7;A0A6I8PTV8 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 1 0 1 61.446 61.446 3 2.1866E-10 19052 20230619_1880_Aki_TMTPro18x_K_F1 121.54 103.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19482 1603 18231 36949 29615 29615 1 9606 Homo sapiens -0.0430444798737426 NFEDRER Unmodified 964.43626 0.43625733 1584 A0A8Q3SIN5;D3DVA5;V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF0 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 0 0 1 1 0 1 28.398 28.398 3 0.0032821 5364 20230619_1880_Aki_TMTPro18x_K_F1 113.5 82.426 44260 34443 40644 45163 62626 54550 39505 40657 50086 48939 53135 52202 48696 44085 48327 35207 58895 45830 40886 31626 41913 44829 62607 54171 41519 42720 50581 49131 54172 52525 49847 45278 49650 36172 56158 43465 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21592000 19483 1584 18232 36950 29616 29616 1 9606 Homo sapiens -0.047383348071889486 NFEDVAFDEK Unmodified 1212.5299 0.52988294 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;Q96C96;B3KTQ9 P4HB Protein disulfide-isomerase yes no 0 0 0 2.5 1.12 1 1 1 1 55.38 55.398 3 4.1901E-07 16731 20230619_1881_Aki_TMTPro18x_K_F2 172.61 124.52 675930 462790 639700 647180 575390 728460 716970 725300 840020 881680 902740 997590 979650 846150 837580 1066900 991400 1145300 624100 425480 652080 639440 607490 729970 718690 745310 851570 886080 927170 1002200 990850 889500 864030 1072300 948140 1086400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1581899999.9999998 19484 537 18233 36951;36952;36953;36954 29617;29618;29619 29618 3 9606 Homo sapiens -0.0678808021543773 NFEDVAFDEKK Unmodified 1340.6248 0.62484596 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;Q96C96;B3KTQ9 P4HB Protein disulfide-isomerase yes no 0 0 1 5.5 0.5 1 1 51.415 51.491 3 2.3434E-05 14406 20230619_1885_Aki_TMTPro18x_K_F5 125.61 97.522 714920 626050 734290 709210 687660 740000 871880 783900 839900 926600 924700 883530 833380 678630 910070 753990 797050 702410 661510 573770 743540 710220 722360 747230 867420 801790 861140 927090 940790 891510 856620 710860 916940 754280 763050 668040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 352950000 19485 537 18234 36955;36956 29620;29621 29620 2 9606 Homo sapiens -0.03184146744251848 NFEQVAFDETK Unmodified 1326.6092 0.6091959 1950 A4L733;Q13087-2;Q13087;B3KQU2;B3KWF3;Q4TT65 PDIA2 Protein disulfide-isomerase A2 yes no 0 0 0 3 0 1 55.267 55.308 3 4.6228E-09 16469 20230619_1882_Aki_TMTPro18x_K_F3 155.24 121.98 66338 61896 76237 75368 72085 80953 79955 80746 92968 85604 83418 86226 73091 67570 91981 78055 80145 87738 61471 56755 76556 75100 75409 81434 80583 82633 93581 86272 85647 86834 75851 70864 92474 78861 76849 83204 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77529000 19486 1950 18235 36957 29622 29622 1 9606 Homo sapiens -0.04104433261295526 NFESGPR Unmodified 805.37187 0.37186616 1366 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4;H3BUN0;H3BSK8;B4DZQ0;A0A087WY32 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 0 0 0 4 0 1 33.862 33.915 2 0.042184 6996 20230619_1883_Aki_TMTPro18x_K_F4 89.752 43.87 29700 24433 25491 33247 41019 44500 38994 34619 46756 36037 42655 39611 37830 37823 31883 29930 50093 43713 27431 22440 26530 32970 41337 43912 39642 36098 46990 36492 43715 39979 38539 38654 33514 30987 47709 41396 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164730000 19487 1366 18236 36958 29623 29623 1 9606 Homo sapiens -0.038604898933272125 NFESLSEAFSVASAAAVLSHNR Unmodified 2306.1291 0.12912328 1878 B2RE46;A0A994J5J1;P04844-2;P04844;B4DJL0;Q5JYR4;Q5JYR7 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 0 0 2 0 1 63.642 63.65 3 1.308E-13 20208 20230619_1881_Aki_TMTPro18x_K_F2 145.04 139.62 26662 20234 25590 24986 21236 30033 31866 32376 33887 29957 29042 31338 30444 31776 33325 30780 35913 40244 24634 18570 26029 24919 22737 30018 31575 32839 34200 30454 30117 31758 31211 32701 33966 31486 34366 38108 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28322000 19488 1878 18237 36959 29624;29625 29624 2 9606 Homo sapiens 0.028303880992552877 NFEWVAER Unmodified 1049.493 0.49304393 3489 P22234;P22234-2;E9PBS1;B4DGX3;D6RF62 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 4 0.816 1 1 1 51.579 51.635 2 0.00099257 14703 20230619_1883_Aki_TMTPro18x_K_F4 151.44 122.07 980590 822050 771870 854520 705180 900330 764120 801700 1048600 1038200 949530 993740 1185400 1020100 994590 1291200 1280900 1326900 905270 752950 800950 861220 741430 904850 776090 832130 1048800 1035600 989370 1012000 1193800 1065900 1032100 1294200 1223100 1259700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1877699999.9999998 19489 3489 18238 36960;36961;36962 29626;29627 29626 2 9606 Homo sapiens -0.029722872506681597 NFFLTNR Unmodified 910.4661 0.4661009 4021 Q59EF6;B4E1R7;B2RCM3;P17655;B4DN77;P17655-2;B3KUH9;Q6ZVC6 CAPN2 Calpain-2 catalytic subunit yes no 0 0 0 4 0 1 50.529 50.561 2 0.057767 14279 20230619_1883_Aki_TMTPro18x_K_F4 82.716 56.607 115460 102640 107730 104690 118240 151560 131140 142110 191280 101840 100000 90117 95036 85435 117610 95565 104760 98411 106760 93980 110250 106240 122620 149450 133270 144660 187520 104910 106650 91921 98292 88821 118360 96112 100310 93464 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159630000 19490 4021 18239 36963 29628 29628 1 9606 Homo sapiens 0.00728648928804887 NFFNPPIISR Unmodified 1203.64 0.64004252 2794 CON__Q28107;A0A0A0MRJ7;P12259 F5 Coagulation factor V;Coagulation factor V heavy chain;Coagulation factor V light chain yes no 0 0 0 4.5 0.5 1 1 58.486 58.515 2 0.00054469 17266 20230619_1885_Aki_TMTPro18x_K_F5 120.99 74.423 + 42845 41264 42899 50700 74523 92120 59160 56798 109860 76734 122070 166050 90081 95469 137460 82788 99848 131120 39662 37835 44112 50918 74678 89169 62069 61027 109330 79264 123620 161890 95277 100030 136570 86294 96114 123920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92562000 19491 2794 18240 36964;36965 29629 29629 1 9606 Homo sapiens 0.04636809634257588 NFFVNYR Unmodified 958.4661 0.4661009 4677;4649 Q9UKL0;Q9P2K3-4;H0YF22;Q9P2K3;Q9P2K3-3 RCOR1;RCOR3 REST corepressor 1;REST corepressor 3 no no 0 0 0 4 0 1 51.416 51.443 2 0.090887 14662 20230619_1883_Aki_TMTPro18x_K_F4 76.847 65.125 141920 116130 115310 132970 107670 135310 125530 147240 183990 138730 148380 116910 159360 141080 159420 169910 141800 127840 131030 106470 119350 132970 113240 136900 127370 149300 182550 140120 154190 120720 162330 146190 161190 167930 135750 121920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73138000 19492 4677;4649 18241 36966 29630 29630 1 9606 Homo sapiens -0.01479351071191104 NFGAENPDPFVPVLSTAVK Unmodified 2001.0207 0.020742027 2332 B2RWN5;B4E263;Q8N7L7 HEATR1 yes no 0 0 0 7.5 0.5 1 1 63.041 63.07 3 0.0055467 19136 20230619_1888_Aki_TMTPro18x_K_F8 65.022 36.046 199540 157030 182690 174600 162740 188240 195140 179940 231620 226700 215490 222440 208690 209940 232930 250740 214830 237970 184340 143950 186650 175160 171640 189170 196000 185690 233280 226530 221680 225570 214570 218970 235550 250570 205880 226080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 273950000 19493 2332 18242 36967;36968 29631;29632 29632 2 9606 Homo sapiens 0.06027248586724454 NFGEDMDDER Oxidation (M) 1242.4459 0.44589532 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;A0A024R9E2;Q3ZCS4;Q9H361;Q5VX58;Q2VIP3;H0YBN4 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 yes no 0 1 0 1 0 1 36.334 36.334 2 0.00045273 8485 20230619_1880_Aki_TMTPro18x_K_F1 120.22 100.44 87325 70692 67809 95208 91546 100110 96382 85791 138720 132140 133460 121260 147520 117680 90058 148440 133790 118880 80592 64920 71036 94126 93459 100530 98133 89907 138730 130800 137610 123520 147360 123130 95320 146860 127490 113280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149320000 19494 566 18243 36969 29633 29633 333 1 9606 Homo sapiens -0.16562979374657516 NFGEDMDDER Unmodified 1226.451 0.4509807 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;A0A024R9E2;Q3ZCS4;Q9H361;Q5VX58;Q2VIP3;H0YBN4 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 yes no 0 0 0 1 0 1 42.257 42.257 2 0.0003652 11107 20230619_1880_Aki_TMTPro18x_K_F1 129.39 116.86 217020 158250 192580 212410 190650 247080 217200 215610 288950 310300 297050 293470 331770 277380 228320 345040 334370 300630 200340 145390 197790 210440 199370 246380 219690 224940 290810 308060 305720 298160 332650 290210 240470 342830 318660 286140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 266110000 19495 566 18243 36970 29634;29635 29635 2 9606 Homo sapiens -0.15318675512048685 NFGEDMDDERLK Unmodified 1467.63 0.63000769 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;A0A024R9E2;Q3ZCS4;Q9H361;Q5VX58;Q2VIP3;H0YBN4 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 yes no 0 0 1 1 0 1 47.229 47.229 3 0.0031614 13232 20230619_1880_Aki_TMTPro18x_K_F1 62.861 40.663 113290 107420 114760 108070 124110 138710 128800 124040 148400 134130 125970 101890 129510 97167 120220 136250 141250 118970 104870 98323 116560 109570 128330 137650 130190 127970 149190 134090 130300 104850 131570 102520 123660 135270 134790 113260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117120000 19496 566 18244 36971 29636 29636 1 9606 Homo sapiens -0.08510210943950369 NFGEEVDDESLK Unmodified 1380.6045 0.60450445 1667 Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;H0Y5F5;H0YCC8 PABPC4 Polyadenylate-binding protein 4;Polyadenylate-binding protein no no 0 0 0 1.5 0.5 1 1 51.808 51.827 2 3.722E-09 15255 20230619_1881_Aki_TMTPro18x_K_F2 202.65 145.05 41011 36225 40831 50362 42696 48188 51156 47971 60248 53235 58546 59742 63071 52590 47270 63543 62569 63335 37940 33268 41586 49647 44442 48876 51357 49189 60769 53734 60334 60124 63483 55063 49280 63620 59723 60155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104220000 19497 1667 18245 36972;36973 29637 29637 1 9606 Homo sapiens -0.07057362194700545 NFGIGQDIQPK Unmodified 1215.6248 0.62478638 3722 P62424;Q5T8U3 RPL7A 60S ribosomal protein L7a yes no 0 0 0 7.5 0.5 1 1 51.988 52.064 3 1.8792E-06 14487 20230619_1887_Aki_TMTPro18x_K_F7 155 113.3 1404600 1223400 1224600 1354300 1173500 1413800 1408900 1406900 1538800 1636300 1503000 1306300 1734700 1481500 1488100 1797300 1580200 1533100 1297900 1121000 1259200 1358100 1230700 1425100 1411100 1443800 1559900 1631500 1552600 1348200 1751500 1539100 1524400 1785500 1510700 1459100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5776800000 19498 3722 18246 36974;36975 29638;29639 29638 2 9606 Homo sapiens 0.02559898046388298 NFGIWLR Unmodified 904.49192 0.49192172 3788 Q02543;M0R3D6;M0R1A7;B4DM94;M0R117;B4DM74;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q32XH3 RPL18A 60S ribosomal protein L18a yes no 0 0 0 5 0.816 1 1 1 59.372 59.411 2 0.0069829 17626 20230619_1885_Aki_TMTPro18x_K_F5 128.75 59.323 923720 868190 791350 770480 802430 1003200 920840 1014600 1128700 437290 356930 311370 422780 334420 576390 463370 432520 366120 853920 793910 815110 790150 837350 997180 927720 1019800 1105200 470260 405580 323430 436830 351130 574810 458520 414770 349010 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 649250000 19499 3788 18247 36976;36977;36978 29640;29641;29642 29641 3 9606 Homo sapiens 0.035855431710729135 NFGLYNER Unmodified 1011.4774 0.47739386 1234 Q2TU84;A0A140VK69;P17174;P17174-2;B7Z1I2 GIG18;GOT1 Aspartate aminotransferase;Aspartate aminotransferase, cytoplasmic yes no 0 0 0 6 0 1 45.296 45.383 2 0.0144 11835 20230619_1886_Aki_TMTPro18x_K_F6 95.741 63.807 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19500 1234 18248 36979 29643 29643 1 9606 Homo sapiens -0.02788573767725211 NFGSYVTHETK Unmodified 1281.599 0.59896556 3739;4348 Q6FGH9;P63167;Q96FJ2 DNCL1;DYNLL1;DYNLL2 Dynein light chain 1, cytoplasmic;Dynein light chain 2, cytoplasmic no no 0 0 0 7 0.816 1 1 1 43.22 43.281 3 1.976E-12 10596 20230619_1887_Aki_TMTPro18x_K_F7 177.81 129.81 246310 180530 211210 232460 223070 215300 228980 262900 277670 316300 296190 376200 350750 361540 192420 574860 598770 621720 227330 165780 217720 230320 230840 220190 232180 266650 281190 318520 305710 378970 349720 384470 223000 575520 569130 589930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 314150000 19501 3739;4348 18249 36980;36981;36982 29644;29645 29644 2 9606 Homo sapiens -0.030569961958690328 NFGYPLGEMSQPTPSPAPAAGGR Unmodified 2301.0848 0.084815622 4025 Q59FT7;B7Z9N9;B7Z3S5;A8K6K3;Q15750-2;Q15750 MAP3K7IP1;TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes no 0 0 0 1 0 1 56.775 56.775 3 0.0068698 17180 20230619_1880_Aki_TMTPro18x_K_F1 57.826 48.543 11213 10285 13230 13086 13285 11599 14410 15532 13504 13557 14628 13194 15138 12072 13498 15945 15504 17538 10392 9435.5 13269 12973 13789 11940 14445 15540 13856 13788 14970 13387 15351 12703 13880 16040 14828 16633 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12897000 19502 4025 18250 36983 29646 29646 1 9606 Homo sapiens -0.013683393185601744 NFIAQGPYENR Unmodified 1307.6258 0.62584901 1233 A0A140VK65;P21281;B4DFM5;B4DQI9 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 6.67 0.471 1 2 46.069 46.157 2;3 6.7053E-05 12179 20230619_1886_Aki_TMTPro18x_K_F6 153.97 145.06 204220 176430 179660 193470 171220 198980 204500 200580 229290 207210 206830 207300 206520 176620 222110 223510 239280 215270 188720 161660 184520 194130 179560 200870 205040 205010 231240 209090 213330 209430 211570 185660 226530 223400 228610 204640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 490630000 19503 1233 18251 36984;36985;36986 29647;29648 29647 2 9606 Homo sapiens -0.01565887584661141 NFIETHK Unmodified 887.45012 0.45011648 807 B4DYL2;A0A087WTJ9;Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 yes no 0 0 0 7 0 1 40.403 40.471 3 0.03637 9485 20230619_1887_Aki_TMTPro18x_K_F7 62.107 35.415 41746 28390 40125 42829 49181 53138 49793 49900 62696 49839 59602 61244 61108 54026 56803 67196 68701 61464 38548 26125 41050 42182 50397 52859 50560 51197 62969 50749 61373 61444 62144 56633 58548 66968 65567 58466 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41963000 19504 807 18252 36987 29649 29649 1 9606 Homo sapiens 0.0018894269189786428 NFILDQCNVYNSGQR Unmodified 1826.837 0.83698078 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 8 0 1 53.332 53.407 3 9.911E-16 15016 20230619_1888_Aki_TMTPro18x_K_F8 193.97 188.43 68993 59715 60139 68334 72464 82732 75071 72940 95464 75647 73300 79133 90640 79738 87841 100860 89031 92893 63751 54736 62070 68489 74439 82347 76139 75267 95193 76480 77065 80233 91858 83324 89510 100530 85200 88301 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175980000 19505 3957 18253 36988 29650 29650 1 9606 Homo sapiens -0.043364233957618126 NFILDQTNVSAAAQR Unmodified 1646.8376 0.8376327 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 6.2 2.64 1 2 2 52.765 52.823 2;3 1.6528E-51 14731 20230619_1888_Aki_TMTPro18x_K_F8 332.56 273.97 315130 283220 306570 323140 318890 382620 373540 343810 383350 357160 379090 349360 390620 321860 393350 391940 370150 395050 291500 259560 312500 323890 331920 381490 373720 354340 389750 360100 389560 354280 398320 336700 398660 392930 354550 375100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 6310599999.999999 19506 3776 18254 36989;36990;36991;36992;36993 29651;29652;29653;29654 29654 4 9606 Homo sapiens 0.040087393156227336 NFINNPLAQADWAAK Unmodified 1671.8369 0.83690442 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5;B4E3S1;A0A8I5KYI1;Q5BKV1;A0A8I5KU92;B1AH99 MYH9 Myosin-9 yes no 0 0 0 1.5 0.5 1 1 62.118 62.123 3 5.9229E-08 19559 20230619_1881_Aki_TMTPro18x_K_F2 136.6 113.23 91238 107570 115850 110900 127840 138310 144580 147750 170310 180200 158870 143130 167410 121460 121700 189250 157060 167980 84786 98418 115810 112180 132210 138060 145590 151060 171710 179210 163740 146330 168310 129690 126890 187670 150010 159740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 589230000 19507 148 18255 36994;36995 29655 29655 1 9606 Homo sapiens 0.027859446665615906 NFITAEELRR Unmodified 1247.6622 0.66223452 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3;A0A0S2Z3X3;A0A0S2Z3C0 ACTN4 Alpha-actinin-4 yes no 0 0 1 7 0 1 44.414 44.497 3 0.00010861 11126 20230619_1887_Aki_TMTPro18x_K_F7 141.89 107.81 45935 41404 41957 40266 44069 41223 46834 43060 44143 43948 44777 39098 47816 34450 48432 45741 47386 44282 42471 37894 42964 40813 45616 41704 46983 43897 45164 44214 46023 39783 48688 36321 49163 45712 45327 42086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25078000 19508 1069 18256 36996 29656 29656 1 9606 Homo sapiens 0.04830989312017664 NFIVWLEDQK Unmodified 1290.6608 0.66083754 4012 Q5RLJ0;Q549M8;Q9Y224;G3V4C6;G3V4E7 C14orf166 UPF0568 protein C14orf166 yes no 0 0 0 7.5 0.5 1 1 64.276 64.301 3 3.4817E-06 19785 20230619_1887_Aki_TMTPro18x_K_F7 141.88 111.62 121820 87196 106150 98596 97668 110440 107590 96076 144610 123090 91224 116720 129120 145580 138630 152300 120100 143110 112440 79976 108950 98836 102510 110480 109010 99899 143160 122900 98004 119700 131290 149410 139860 152410 115250 135940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220150000 19509 4012 18257 36997;36998 29657 29657 1 9606 Homo sapiens 0.027133552232726288 NFLPILFNLYGQPVAAGDTPAPR Unmodified 2470.3009 0.30088005 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9;B3KY97 RRP12 RRP12-like protein yes no 0 0 0 5.5 0.5 1 1 66.036 66.079 3 3.0684E-26 20781 20230619_1886_Aki_TMTPro18x_K_F6 183.09 172.25 5570.8 4101.8 4783.9 5525.8 4210.3 4373.7 4747.5 7173.1 4492.9 6729.8 4627.3 4885.1 7311.1 5203.6 5929.1 7080.1 5295.9 6898.6 5141.9 3768.4 4919.9 5450.4 4431.5 4573.6 4756.6 7114.1 4613.6 6759.7 4861.4 5054.8 7302.6 5463.5 6025.3 7070.5 5084.3 6548.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53517000 19510 2355 18258 36999;37000 29658 29658 1 9606 Homo sapiens 0.12454164857581418 NFLTQDSADLDSIEAVANEVLK Unmodified 2391.1805 0.18054973 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;Q8TAS6 LAMB1 Laminin subunit beta-1 yes no 0 0 0 5 0 1 66.715 66.757 3 0.017064 20882 20230619_1885_Aki_TMTPro18x_K_F5 47.392 37.196 2418.1 2315.8 2535.8 2106.5 0 0 2001.3 3068.8 2525.9 1916.3 2147.9 1557.5 2295.8 1052 2938.6 4230.4 2552.9 2750.8 2239.3 2117.9 2525.5 2124.1 0 0 1922.7 2889.8 2523.5 1983.8 2225.6 1590.5 2363.3 1272 2963.1 4111.8 2447.7 2627.7 1 1 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 4352000 19511 3015 18259 37001 29659 29659 1 9606 Homo sapiens 0.04060667282647046 NFLYAWCGK Unmodified 1157.5328 0.53280025 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 4.5 0.5 1 1 61.568 61.594 3 0.00065793 18618 20230619_1885_Aki_TMTPro18x_K_F5 107.47 88.685 260540 233460 250950 242390 238860 313790 278200 264920 323720 276060 224230 223520 241110 212000 252830 293720 268100 250710 240990 213790 255560 245110 250590 310730 279570 274270 323250 276970 235560 228970 246240 223350 257960 291320 256250 238640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 590880000 19512 3811 18260 37002;37003 29660;29661 29661 2 9606 Homo sapiens -0.039664835716166635 NFNAVGSVLSK Unmodified 1134.6033 0.60332266 1374 H3BMM5;B2RDH6;A0A2R8YF87;Q96AX1;F5H2X5 VPS33A Vacuolar protein sorting-associated protein 33A yes no 0 0 0 3 0 1 55.47 55.511 3 0.00030304 16586 20230619_1882_Aki_TMTPro18x_K_F3 102.4 76.358 42750 36333 41742 43909 46506 51510 48677 46203 80050 48574 52170 60064 61015 49826 50370 64002 64335 66695 39531 33324 42574 43821 48052 51391 49886 47644 78565 49392 55259 60106 61502 52489 52253 64195 61436 63310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58618000 19513 1374 18261 37004 29662 29662 1 9606 Homo sapiens 0.04140513017705416 NFNETFLK Unmodified 1011.5025 0.50254598 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 7.5 0.5 2 2 54.475 54.54 2;3 0.0018337 15489 20230619_1888_Aki_TMTPro18x_K_F8 110.41 83.81 170280 142260 161120 157720 141740 166990 170680 172800 185240 179060 183100 172790 199900 154770 169990 209670 185220 183880 157410 130380 164140 158220 149630 168310 170930 176290 187820 180430 188610 175210 201960 163190 174450 208260 177060 174930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 302300000 19514 2297 18262 37005;37006;37007;37008 29663;29664 29664 2 9606 Homo sapiens -0.002745189651477631 NFPFDVTK Unmodified 966.48108 0.48108226 4210 Q8IXT5;B9ZVT1 RBM12B RNA-binding protein 12B yes no 0 0 0 8 0 1 57.652 57.704 2 0.035775 16905 20230619_1888_Aki_TMTPro18x_K_F8 74.92 35.377 45537 37221 43090 46785 39632 44785 43663 42292 53091 50671 47959 45757 58597 43268 49710 54948 52705 51713 42088 34156 43944 46434 41576 45384 44091 43616 53367 50625 49895 46604 59001 45365 50897 54835 50392 49156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30254000 19515 4210 18263 37009 29665 29665 1 9606 Homo sapiens -0.0034990399385605997 NFPNAIEHTLQWAR Unmodified 1695.8481 0.84813781 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 2.5 0.5 1 1 57.527 57.551 3 8.3576E-38 17605 20230619_1881_Aki_TMTPro18x_K_F2 288.77 246.78 155600 121170 153940 167290 141760 155870 158640 168430 183670 208260 199350 206470 208750 188800 189380 210420 202390 218100 143830 111320 156410 164980 148680 158750 159840 172260 186480 208220 204260 209020 211900 196450 193760 211490 193630 207010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 965760000 19516 134 18264 37010;37011 29666;29667 29666 2 9606 Homo sapiens 0.028047667606870164 NFPNEFAK Unmodified 965.46068 0.46068117 689 F8VVL1;A0A024RBR3;O43583 DENR Density-regulated protein yes no 0 0 0 7 0 1 50.48 50.561 2 0.020074 13776 20230619_1887_Aki_TMTPro18x_K_F7 88.948 34.54 88667 69818 83647 87760 88489 96578 102930 87089 112610 100150 106070 105020 123160 96819 96596 125850 123980 119050 81930 64078 85496 87265 91916 96781 103200 90030 113890 100710 109850 106170 123870 101700 100360 125540 118330 113160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 267500000 19517 689 18265 37012 29668 29668 1 9606 Homo sapiens -0.023430746536746483 NFQANTK Unmodified 821.40317 0.40316629 3321 O75937;S4R3J5 DNAJC8 DnaJ homolog subfamily C member 8 yes no 0 0 0 8 0 1 38.015 38.001 2 0.040181 8690 20230619_1888_Aki_TMTPro18x_K_F8 94.302 61.182 17119 8565.2 26403 28556 39127 38342 26121 37319 25005 17112 32893 34432 20382 22200 28973 8475.9 37643 27950 15862 8011.4 26243 27278 39216 37966 27103 37627 25807 18892 32854 33732 21646 22571 29668 9899.5 35866 26376 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12527000 19518 3321 18266 37013 29669 29669 1 9606 Homo sapiens -0.014679168592351743 NFQWANTGAAVFGTQSVGTQSAGK Unmodified 2426.1615 0.16148604 3613 P49792;A0A8V8TLN4;A0A8V8TLA0;A0A8V8TL79;A0A8V8TMX6;Q5JC45;Q5JC46 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 4 0 1 61.398 61.401 3 4.0839E-26 18910 20230619_1883_Aki_TMTPro18x_K_F4 171.06 154.95 24290 19949 22148 29758 24935 27086 24306 24009 31202 31460 30253 27579 28388 28735 25744 29811 31520 31028 22445 18341 22762 29185 25676 27516 24759 24950 31371 31289 30980 28213 28943 29646 26566 30000 30099 29460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69513000 19519 3613 18267 37014 29670 29670 1 9606 Homo sapiens 0.005451755021567806 NFRNPLAK Unmodified 958.53485 0.53484916 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2;A4QMW8 ENO1 Alpha-enolase;Enolase yes no 0 0 1 5.5 0.5 1 1 43.949 44.034 3 0.0055213 11240 20230619_1885_Aki_TMTPro18x_K_F5 104.75 60.63 916540 1285000 969740 607520 1065500 461860 813480 877410 526610 699280 749900 418360 660450 429570 858200 769110 791150 406090 851690 1169900 978760 671120 1085800 491990 827220 862410 562790 706610 753410 439720 685250 460990 864870 747470 754950 390960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1096000000 19520 293 18268 37015;37016 29671;29672 29671 2 9606 Homo sapiens 0.053923132285035535 NFRPDDPAR Unmodified 1086.5207 0.52065566 1021 A0A0U1RQP1;A0A0D9SFE4;A0A994J7J4;Q05193-3;Q05193;B4DHH5;A0A0D9SFB1;B7ZAC0;B4DK06;Q05193-5;Q05193-2;Q59GI5;A0A994J5P0;A0A1B0GU67 DNM1 Dynamin-1 yes no 0 0 1 4.5 0.5 1 1 32.975 33.044 3 0.0020802 6760 20230619_1883_Aki_TMTPro18x_K_F4 101.9 59.706 42534 34320 43341 44613 42163 48136 55447 46323 62757 51371 58884 63459 56038 50542 54694 59708 70344 61234 39333 31507 43963 44254 44254 48360 55332 47620 63307 52037 60509 63427 57261 53023 56527 59930 67090 58177 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26432000 19521 1021 18269 37017;37018 29673 29673 1 9606 Homo sapiens -0.01914383990447277 NFRPDDPTR Unmodified 1116.5312 0.53122035 3619 P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96;K7EMQ3;B4DJ53 DNM2 Dynamin-2 yes no 0 0 1 4.5 0.5 1 1 33.492 33.561 3 0.00024788 6998 20230619_1885_Aki_TMTPro18x_K_F5 123.6 90.218 104730 95792 110030 118610 137280 135430 134820 134560 146910 124130 154360 153840 129260 121060 147650 113910 154170 142040 96956 87855 111780 118130 140220 135690 136460 137260 149160 126930 156970 153680 133660 125540 149980 116280 147360 134660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49992000 19522 3619 18270 37019;37020 29674;29675 29675 2 9606 Homo sapiens -0.022384013360351673 NFRPDDPTRK Unmodified 1244.6262 0.62618337 3619 P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96;K7EMQ3;B4DJ53 DNM2 Dynamin-2 yes no 0 0 2 4.5 3.5 1 1 35.389 35.383 4 0.023132 8122 20230619_1880_Aki_TMTPro18x_K_F1 80.24 60.25 247490 190000 234200 240610 290020 278560 274130 298140 352860 293230 356360 373290 349780 325430 305110 326170 418690 346370 228660 174410 239840 239380 296220 279340 279810 303010 354930 299130 365220 373660 355380 337130 317380 328900 399000 329030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 208840000 19523 3619 18271 37021;37022 29676;29677 29676 2 9606 Homo sapiens 0.013655321351507155 NFSDEIR Unmodified 879.40865 0.4086456 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 2 0 1 41.431 41.508 2 0.061092 10506 20230619_1881_Aki_TMTPro18x_K_F2 81.215 61.511 95346 66218 80692 94627 98173 125680 104020 107710 157610 105650 108050 148980 147600 114110 107360 138890 153400 190040 87968 60891 83564 93574 101020 124230 106140 111210 155430 108320 115150 147990 147480 120280 112600 141910 146580 179830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46865000 19524 4222 18272 37023 29678 29678 1 9606 Homo sapiens -0.03588238067425209 NFSDNQLQEGK Unmodified 1278.584 0.58404378 1438 A0A384MTL2;P37802;P37802-2;X6RJP6 TAGLN2 Transgelin-2 yes no 0 0 0 4 0.816 2 2 2 44.792 44.854 2;3 1.3455E-16 11622 20230619_1883_Aki_TMTPro18x_K_F4 224.58 156.68 529180 432820 454950 476500 482520 489310 620160 635960 790580 679100 596060 528050 735090 567340 535590 798730 612910 528080 488750 396680 468930 478190 502760 497420 622300 640400 787940 679610 626100 544880 736090 596140 553840 783070 585100 504750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5794600000 19525 1438 18273 37024;37025;37026;37027;37028;37029 29679;29680;29681 29680 3 9606 Homo sapiens -0.04410488063876983 NFSEVFQK Unmodified 997.4869 0.48689592 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 4.5 3.5 1 1 54.762 54.796 2;3 8.3634E-05 16342 20230619_1880_Aki_TMTPro18x_K_F1 182.73 138.28 185790 155300 165800 171170 155530 184630 170930 184770 201030 196950 218630 188730 227180 191690 203890 239640 231760 220950 171660 142320 169970 171810 162970 185700 172480 189030 203790 198170 223640 192290 230490 200170 209470 238900 221400 210090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 276710000 19526 4191 18274 37030;37031 29682;29683 29682 2 9606 Homo sapiens -0.011948054821800724 NFSGAELEGLVR Unmodified 1290.6568 0.65681479 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;A0A994J5C5;A0A994J855;A0A994J5Y2;A0A994J7T3;Q96D47 NSF Vesicle-fusing ATPase yes no 0 0 0 5.5 0.5 2 2 56.764 56.831 2;3 4.1475E-09 16604 20230619_1885_Aki_TMTPro18x_K_F5 189.52 156.25 123120 110770 118930 123340 117480 135100 145640 147780 144010 131400 138180 129070 141060 122550 134720 139950 147970 150640 113890 101490 121190 123750 122900 136020 145170 149630 146530 133600 142140 130990 143610 127560 137870 140950 141470 142960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 478400000 19527 1435 18275 37032;37033;37034;37035 29684;29685 29684 2 9606 Homo sapiens 0.023112657295769168 NFSGPVPDLPEGITVAYTIPK Unmodified 2214.1572 0.15723551 1730 E7EQ61;A0A804HJ86;Q9GZZ9;Q9GZZ9-2 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes no 0 0 0 1 0 1 63.633 63.633 3 0.011052 19978 20230619_1880_Aki_TMTPro18x_K_F1 53.059 42.592 6568.9 6414.8 8792.1 6656.9 6073.4 7510.7 6943.2 8487.6 7463.2 9396.1 8177.9 9242.7 8205.3 9056.6 8961.9 9040.6 10002 11499 6098.5 5872.4 8692.5 6724.2 6547.2 7553.4 6978.5 8620.7 7613.5 9437.3 8368.6 9376.8 8424.9 9343 9158 9222.9 9570.1 10890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22333000 19528 1730 18276 37036 29686 29686 1 9606 Homo sapiens 0.09872318026600624 NFSNMDDEENYSAASK Oxidation (M) 1836.7108 0.71083679 2242 B2R7C2;O43264;O43264-2;B4E1J7 ZW10 Centromere/kinetochore protein zw10 homolog yes no 0 1 0 1.5 0.5 1 1 44.262 44.303 3 0.012579 11855 20230619_1881_Aki_TMTPro18x_K_F2 57.525 53.354 14528 15427 18220 16506 15747 21854 19748 17529 22286 17980 20899 19349 18497 16656 21758 20665 24919 20726 13487 14122 18162 16658 16685 21588 19757 18224 22482 18202 21401 19502 19121 17477 22234 20710 23783 19701 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37526000 19529 2242 18277 37037;37038 29687 29687 1395 1 9606 Homo sapiens -0.17405019482316675 NFSTVDIQK Unmodified 1050.5346 0.53457439 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;B4DN49;B4DL39;B4DSB9 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 7 0 1 49.947 50.029 2 8.6765E-05 13585 20230619_1887_Aki_TMTPro18x_K_F7 176.78 147.44 138140 121980 124530 122940 113440 146300 130130 124270 146830 168750 179480 162300 179390 146760 141440 184460 181170 163680 127700 111680 127480 124450 119380 145690 130810 129670 150020 167960 182440 164600 181260 153900 146920 183480 172840 155750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182030000 19530 3585 18278 37039 29688 29688 1 9606 Homo sapiens 0.011328487179980584 NFSVNLYK Unmodified 983.50763 0.50763136 4742 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 3 0 1 54.27 54.316 2 0.00071735 16104 20230619_1882_Aki_TMTPro18x_K_F3 157.68 96.917 110400 89583 114920 117800 122160 129210 131500 135650 145610 124190 122850 107430 120300 106440 120500 119080 119240 112230 102110 82247 116490 116800 126500 129930 132500 137800 146590 125650 126920 109850 122900 110490 122450 119100 114060 106690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85205000 19531 4742 18279 37040 29689 29689 1 9606 Homo sapiens 0.0152178489746575 NFTLDMI Oxidation (M) 868.40005 0.40005474 560 A0A024R983;P10155;B3KN94;G5E9R9 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 1 0 3.5 0.5 1 1 62.166 62.183 2 0.012284 19245 20230619_1883_Aki_TMTPro18x_K_F4 110.36 100.38 47384 40822 45120 48373 60007 56179 52092 55400 60521 38871 49977 41224 45357 33123 51692 56643 38545 35821 43812 37431 46251 48341 60875 56225 53246 56199 60683 40272 51528 41567 46691 35664 51758 55366 36988 34253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46542000 19532 560 18280 37041;37042 29690 29690 326 1 9606 Homo sapiens -0.03940928028248436 NFTLDMI Unmodified 852.40514 0.40514012 560 A0A024R983;P10155;B3KN94;G5E9R9 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 0 0 4.5 0.5 1 1 64.717 64.744 2 0.010649 20048 20230619_1885_Aki_TMTPro18x_K_F5 117.7 87.603 63451 57393 55235 63037 58676 77652 66002 75247 72702 43692 46935 36136 39742 37727 58885 51513 47219 31175 58647 52579 56910 63402 60997 77327 66338 76158 72554 45665 49026 37179 41732 39547 58853 50441 45180 29884 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61283000 19533 560 18280 37043;37044 29691 29691 1 9606 Homo sapiens -0.02696624165639605 NFTMDTESSVYNFEGEDYREK Oxidation (M) 2576.0649 0.06492762 2629 B7ZAX9;B4DZC0;O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 1 1 3.5 0.5 1 1 53.406 53.442 3 4.8853E-08 15690 20230619_1882_Aki_TMTPro18x_K_F3 112.82 109.3 25326 23458 26584 27305 29452 28491 26858 26176 25298 32383 33680 30787 30914 30177 28371 37010 30201 29992 23448 21500 26939 27280 30251 28686 27201 27072 26230 32336 34021 31324 31540 31482 29045 36668 28877 28562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154100000 19534 2629 18281 37045;37046 29692 29692 1580 1 9606 Homo sapiens -0.16006224630518773 NFTTEQVTAMLLSK Unmodified 1581.8072 0.80724378 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;O14992;Q7KYN0 HSPA4;HEL-S-5a;HS24/p52;HS24/P52 Heat shock 70 kDa protein 4 yes no 0 0 0 2.5 0.5 1 1 63.601 63.62 3 6.0286E-07 19945 20230619_1882_Aki_TMTPro18x_K_F3 133.47 120.59 170090 130000 152000 155780 124620 149060 151640 154160 160390 197610 185610 171480 226540 174420 172040 232090 183810 217740 157070 119270 155520 155160 132470 151360 151700 158290 164130 196530 190900 175490 227170 182980 176900 231310 175990 206840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 387840000 19535 3544 18282 37047;37048 29693;29694 29694 2 9606 Homo sapiens 0.03961244606216496 NFVHAQCLELK Unmodified 1357.6813 0.6812554 4594 Q9NU22;Q6AI22 MDN1;DKFZp686H16106 Midasin yes no 0 0 0 8 0 1 48.593 48.66 3 0.00015831 12973 20230619_1888_Aki_TMTPro18x_K_F8 114.82 83.338 85302 72883 89244 89378 82967 91545 95470 96334 100640 105280 103310 97358 108600 89313 99832 98664 104440 103330 78929 66854 90238 88962 86987 92523 95731 98317 102390 105660 106070 98921 110220 92925 101910 99275 99873 98095 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98995000 19536 4594 18283 37049 29695 29695 1 9606 Homo sapiens 0.01672202611416651 NFVVVMVTK Unmodified 1035.5787 0.57868781 3653;450 A8K1J3;A0A024R7G8;P54725-3;P54725;A0A494C0B4;P54725-2;K7ENJ0;K7ELW1;P54727;B4DEA3;Q53F10;B7Z4W4;B7ZA74;Q5W0S5;Q5W0S4 RAD23A;RAD23B UV excision repair protein RAD23 homolog A;UV excision repair protein RAD23 homolog B no no 0 0 0 4 0 1 60.75 60.752 3 0.0036333 18604 20230619_1883_Aki_TMTPro18x_K_F4 79.974 53.855 124000 106270 124190 103800 100310 126190 105200 101850 146270 99395 92037 95781 124570 101800 125400 132720 119330 160410 114700 97281 125650 105430 106410 125380 107080 105680 144440 100630 98466 97677 126140 106540 127220 134380 114510 151920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56950000 19537 450;3653 18284 37050 29696;29697 29696 2 9606 Homo sapiens 0.06232161610637377 NFVVVMVTKPK Unmodified 1260.7264 0.72641468 3653 P54727;B4DEA3;Q53F10;B7Z4W4;B7ZA74;Q5W0S5;Q5W0S4 RAD23B UV excision repair protein RAD23 homolog B yes no 0 0 1 6 0 1 55.874 55.949 3 1.0002E-06 16417 20230619_1886_Aki_TMTPro18x_K_F6 164.13 144.03 483740 437040 485820 444240 369470 435790 493240 427650 519870 566380 566810 454460 501640 396940 614460 422900 397270 379700 447610 400120 491380 448350 396440 441370 491070 441340 530080 561500 576010 464470 518840 412920 609800 422880 382080 361170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280960000 19538 3653 18285 37051 29698 29698 1 9606 Homo sapiens 0.10648053144609548 NFYDSPEK Unmodified 998.43453 0.434526 2272 E7EWP0;D3DNS1;B2R9L0;H0Y886;O43674-2;O43674 NDUFB5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes no 0 0 0 4 0 1 45.174 45.218 2 0.080643 11861 20230619_1883_Aki_TMTPro18x_K_F4 66.692 38.585 48551 41983 42283 44565 58437 65220 49961 54335 67802 50933 73949 66431 62846 54807 55674 62688 69089 75529 44862 38457 43729 45074 59249 64142 51427 56147 68216 52168 75023 66398 64168 57338 57521 63565 66019 71578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166670000 19539 2272 18286 37052 29699 29699 1 9606 Homo sapiens -0.06475388615808697 NFYQEHPDLAR Unmodified 1388.6473 0.64731274 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;J3QRQ7;J3KTQ4;C1IK54;J3QR02;X6RLV5 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 4 0.816 1 1 1 40.606 40.657 3 1.2735E-23 9779 20230619_1883_Aki_TMTPro18x_K_F4 221.6 200.05 274130 242660 256610 286140 259510 307920 294380 308010 348700 339450 324490 282270 344100 302820 282840 355270 342710 312300 253470 222470 262390 285720 270530 309700 296520 315410 351280 339720 334570 290050 347790 314430 292390 353580 327110 297190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2396600000 19540 3137 18287 37053;37054;37055 29700;29701;29702 29701 3 9606 Homo sapiens -0.031465025559555215 NFYVEHPEVAR Unmodified 1359.6571 0.65714914 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 4.5 0.5 1 1 41.005 41.07 3 6.1684E-09 9972 20230619_1883_Aki_TMTPro18x_K_F4 170.68 150.47 315960 253250 290110 280620 283850 307580 338840 299610 357400 429530 455570 421580 479170 414790 381380 480550 487950 471920 291930 232130 296710 281660 296780 308940 339050 310170 367240 426840 463500 428250 483730 431560 395960 481100 465720 448390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1443000000 19541 1328 18288 37056;37057 29703;29704 29703 2 9606 Homo sapiens -0.008293145506058863 NFYVEVPELAK Unmodified 1307.6762 0.67615325 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 7 0 1 61.849 61.888 2 0.0057419 18632 20230619_1887_Aki_TMTPro18x_K_F7 85.731 65.944 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19542 1002 18289 37058 29705 29705 1 9606 Homo sapiens 0.034622220204710175 NFYYAAVPSAR Unmodified 1257.6142 0.6142217 1287 B7Z462;G3V1S6;B7Z6K2;A0A1L7NY50;A0A1L7NY41;Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase;Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes no 0 0 0 3.5 0.5 1 1 50.313 50.366 2 0.00052051 14284 20230619_1882_Aki_TMTPro18x_K_F3 115.78 94.911 91208 78559 91595 103150 97648 105890 89428 96550 107470 105580 109650 97184 115370 89763 123110 124170 115600 109720 84368 72109 93156 102160 100740 106650 91261 99519 108590 105980 112600 98885 117870 94685 124640 123420 110640 104390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139190000 19543 1287 18290 37059;37060 29706 29706 1 9606 Homo sapiens -0.004280846080291667 NGDLDEVK Unmodified 888.41888 0.41887593 3673 P58546;Q69YG1;C9JL85 MTPN;DKFZp761E1322 Myotrophin yes no 0 0 0 1.5 0.5 1 1 42.06 42.1 2 0.0021416 10799 20230619_1881_Aki_TMTPro18x_K_F2 131.44 83.622 138270 81246 195600 169520 218050 246690 178690 230630 241440 175510 278850 295460 214460 239910 242980 115930 289340 266590 128070 75169 194090 164850 223670 243000 184640 235080 243500 184060 281650 292350 222670 242630 248400 127400 276230 251690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133570000 19544 3673 18291 37061;37062 29707;29708 29708 2 9606 Homo sapiens -0.029796751328490245 NGDYLCVK Unmodified 967.44332 0.44331654 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q59FS8 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 6 0 1 47.137 47.218 2 0.023675 12700 20230619_1886_Aki_TMTPro18x_K_F6 85.731 58.206 66302 53463 59060 67714 66186 69621 68699 60717 81450 79715 78128 68649 81797 64991 72571 83984 88735 74716 61247 49067 60752 67220 68257 70069 69498 63182 82146 79235 80406 70106 82915 68186 74906 83542 84648 71116 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32951000 19545 487 18292 37063 29709 29709 1 9606 Homo sapiens -0.041707382509684976 NGERQDEESLGGR Unmodified 1445.6495 0.64949758 24 A0A2R8Y4Z6;J3KMZ7;B4DQZ5;A0A024QZ48;Q9H0H0 INTS2 Integrator complex subunit 2 yes no 0 0 1 1 0 1 28.467 28.467 3 0.034269 5409 20230619_1880_Aki_TMTPro18x_K_F1 54.524 38.635 2116.9 2645.1 2099.7 2277.1 3057.3 4597.9 3704.6 3981.7 3074.8 2780.3 2245.5 3064.8 3472.8 3413.4 2338.2 2407.7 3585.8 4006.5 1963.7 2416.3 2152.7 2361.9 3124.3 4456.6 3676.7 4074.2 3137.2 2883.8 2402.4 3106.4 3456.2 3457.2 2466.5 2525.3 3421.7 3786.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3932100 19546 24 18293 37064 29710 29710 1 9606 Homo sapiens -0.05550118608834964 NGESSELDLQGIR Unmodified 1416.6845 0.68448611 2984 F8W031;F8VXJ7;Q9Y2B0;F8W1K5;H0YI18 CNPY2 Protein canopy homolog 2 yes no 0 0 0 2 0 1 47.257 47.332 2 1.1322E-20 13202 20230619_1881_Aki_TMTPro18x_K_F2 218.75 171.15 51800 45478 52390 58821 60241 68362 60283 66139 81193 61263 68977 72793 69783 67136 66939 72739 79489 75712 47924 41735 53330 58421 62000 68338 61430 67577 80979 62571 71405 73193 71134 69695 68840 73164 75907 71894 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62008000 19547 2984 18294 37065 29711 29711 1 9606 Homo sapiens -0.007188758008624063 NGETELCMEGR Oxidation (M) 1310.5231 0.52309978 3356 O95433;G3V438;H0YJU2 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 1 0 1 0 1 34.404 34.404 2 0.052637 7751 20230619_1880_Aki_TMTPro18x_K_F1 61.165 52.206 38372 36616 32960 30935 38992 40103 39281 39235 51121 43703 49659 32998 51458 38348 35768 53667 47378 38001 35477 33470 34007 31873 40042 39878 39952 40241 51326 43633 50956 34262 51687 40202 37385 52756 45154 36294 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53894000 19548 3356 18295 37066 29712 29712 1964 1 9606 Homo sapiens -0.11974084429971299 NGETELCMEGR Unmodified 1294.5282 0.52818516 3356 O95433;G3V438;H0YJU2 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 1 0 1 39.38 39.38 2 8.4038E-05 9828 20230619_1880_Aki_TMTPro18x_K_F1 139.31 131.91 43682 37164 38760 39404 37499 52716 45445 45258 56301 50831 58585 43870 60940 42636 44250 59337 69113 51563 40364 34044 39785 39799 39382 52108 45698 46883 56802 50886 59976 44891 61290 44945 46737 58878 65765 49121 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69210000 19549 3356 18295 37067 29713 29713 1 9606 Homo sapiens -0.10729780567362468 NGEVQNLAVK Unmodified 1070.572 0.57202253 2126 A8K8U1;Q86VP6;Q86VP6-2;F5H6I6;A0A384MDT0;O75155-2;O75155;A0A3B3ISC4;F8WBB8 CAND1;CAND2 Cullin-associated NEDD8-dissociated protein 1;Cullin-associated NEDD8-dissociated protein 2 yes no 0 0 0 6 0 1 44.439 44.528 2 1.4312E-06 11501 20230619_1886_Aki_TMTPro18x_K_F6 173.37 103.95 46456 40934 39784 38095 41656 56010 41990 36578 61968 65881 65949 73728 69504 67672 52951 65030 85154 81952 42926 37453 40995 38959 43267 54843 42929 39501 62191 65284 67654 74216 70128 69852 55974 66308 81141 77671 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25614000 19550 2126 18296 37068 29714 29714 1 9606 Homo sapiens 0.039559399836207376 NGFLNLALPFFGFSEPLAAPR Unmodified 2277.1946 0.19462407 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2;Q8WY81 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 7 0 1 68.029 68.05 3 5.9071E-12 21333 20230619_1887_Aki_TMTPro18x_K_F7 139.11 116.01 3545 3379.9 3853 4826.7 2723.9 3927.2 4422.8 4633.5 4261.6 4852.9 5379.5 4541.8 2596.2 3303.5 5194.8 4183.3 5257.3 3282.8 3283.7 3104.2 3879.1 4742 2968.9 4051.9 4358.4 4691.6 4392.5 4879.5 5343.4 4584.5 2869.3 3488.4 5234.1 4143.5 5015.9 3134.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7055700 19551 134 18297 37069 29715 29715 1 9606 Homo sapiens 0.10711454082866112 NGFVVLK Unmodified 775.45922 0.4592246 3110 I3L397;I3L504;P63241;P63241-2;Q6IS14;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 0 0 0 2.5 0.5 1 1 52.852 52.898 2 0.038034 15728 20230619_1881_Aki_TMTPro18x_K_F2 97.068 60.872 662450 559160 622420 600820 537600 669330 632300 572080 661750 800980 709570 631530 683590 578250 751320 640660 577070 546790 612370 512290 634260 604530 568310 669510 633130 597360 675190 791960 724370 646740 701380 601590 752570 638070 553610 520450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 488850000 19552 3110 18298 37070;37071 29716;29717 29716 2 9606 Homo sapiens 0.06251336048251233 NGGQILIADLR Unmodified 1168.6564 0.65642086 3660 P55735-2;P55735;P55735-4;P55735-3;A8MXL6;Q59FA6;Q53GB2;E7ERC8;A4UCS7;A8MWR8 SEC13 Protein SEC13 homolog yes no 0 0 0 7 0 1 53.544 53.611 2 5.861E-07 15173 20230619_1887_Aki_TMTPro18x_K_F7 140.49 85.115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19553 3660 18299 37072 29718 29718 1 9606 Homo sapiens 0.07883890800349036 NGLHCAFAHGPHDLR Unmodified 1700.7954 0.79539073 529 A0A024R8N4;Q9C0B0;K7ELF5 hCG_1776081;UNK RING finger protein unkempt homolog yes no 0 0 0 8 0 1 34.04 34.036 5 0.0011416 7127 20230619_1888_Aki_TMTPro18x_K_F8 79.022 67.966 17465 13508 16520 13978 13930 21081 13263 13770 21285 18073 19887 19896 22349 21081 17849 21999 20859 18112 16136 12376 16808 14177 14723 20603 13669 14684 21166 18113 20569 20160 22534 21737 18418 21868 19910 17254 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11769000 19554 529 18300 37073 29719 29719 1 9606 Homo sapiens -0.026975145737651474 NGLSLAALK Unmodified 885.52837 0.5283668 3461 P16401 HIST1H1B Histone H1.5 yes yes 0 0 0 3 0 2 55.208 55.249 2;3 1.5224E-10 16457 20230619_1882_Aki_TMTPro18x_K_F3 191.16 124.12 107790 92085 94530 90412 129230 226440 132920 125330 273210 22997 18600 24333 24933 20858 59179 25548 27572 21653 99599 84299 97754 93183 132590 216090 137820 132210 259380 29417 31409 24600 26982 21872 57640 25492 26645 20629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137610000 19555 3461 18301 37074;37075 29720;29721 29721 2 9606 Homo sapiens 0.08102375277144347 NGPEFEAR Unmodified 918.41954 0.41954463 146 A0A024R1K8;Q15459;Q15459-2 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 2 0 1 35.617 35.673 2 0.0099939 7914 20230619_1881_Aki_TMTPro18x_K_F2 100.09 69.521 104370 88072 91358 99493 120000 118020 113140 110820 162020 121620 137770 131590 139170 124710 124990 143570 151560 129700 96430 80726 94350 99801 122200 117840 115940 114000 161200 122750 142490 132970 141400 129810 128910 143160 144600 123410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292760000 19556 146 18302 37076 29722 29722 1 9606 Homo sapiens -0.04292835693138386 NGQDLGVAFK Unmodified 1047.5349 0.53490874 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 7 0.816 1 1 1 50.599 50.678 2 1.4911E-13 13856 20230619_1887_Aki_TMTPro18x_K_F7 225.87 164.96 702960 581310 589040 647960 746530 762460 757710 731610 820240 789440 851480 830470 934850 784230 812280 959640 922300 891140 649180 532800 610540 650550 763050 761950 765160 751090 833450 796120 875640 840080 945630 819680 835010 957320 881170 847250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 782230000 19557 3776 18303 37077;37078;37079 29723;29724;29725 29724 3 9606 Homo sapiens 0.013042684378433478 NGQLAASVETAGDSELFLMK Oxidation (M) 2096.0096 0.0095849934 1426 A0A384MEG1;Q16658;B3KTA3;B3KTM9;C9JFC0;A0A0A0MSB2;C9JPH9 FSCN1 Fascin yes no 0 1 0 5 0 1 61.51 61.559 3 2.879E-05 18590 20230619_1885_Aki_TMTPro18x_K_F5 89.011 19.756 74210 65293 69961 80890 74884 79591 78557 76009 83441 81479 88588 80971 86501 79479 81556 94669 90571 91669 68620 59891 71557 80381 77472 80515 79159 78073 84935 82051 90512 82231 88160 82810 83591 94688 86578 87095 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124580000 19558 1426 18304 37080 29726 29726 898 1 9606 Homo sapiens 0.005420584303010401 NGQLAASVETAGDSELFLMK Unmodified 2080.0147 0.014670371 1426 A0A384MEG1;Q16658;B3KTA3;B3KTM9;C9JFC0;A0A0A0MSB2;C9JPH9 FSCN1 Fascin yes no 0 0 0 5 0.816 1 1 1 62.789 62.823 3 3.0181E-22 19222 20230619_1885_Aki_TMTPro18x_K_F5 170.38 153.95 55661 46715 51022 56965 50828 57664 56082 56877 69337 65475 73409 65149 66448 68212 67043 67375 74144 83462 51441 42851 52249 56697 52995 58242 56665 58394 70023 65725 74768 66284 68149 70198 68561 68622 70936 79068 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138040000 19559 1426 18304 37081;37082;37083 29727 29727 1 9606 Homo sapiens 0.017863622928871337 NGQVIGIGAGQQSR Unmodified 1383.7219 0.72187466 3534;2560 B4DP06;H7C1S2;V9HWH7;P31939;B2R7P8;P31939-2 ATIC;HEL-S-70p Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 0 4.5 3.5 1 1 40.349 40.345 2 6.8005E-13 10234 20230619_1880_Aki_TMTPro18x_K_F1 164.48 135.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19560 2560;3534 18305 37084;37085 29728;29729 29728 2 9606 Homo sapiens 0.04536260255417801 NGQYAEASALYGR Unmodified 1398.6528 0.65279205 3941 Q15785;Q6ZPD0 TOMM34 Mitochondrial import receptor subunit TOM34 yes no 0 0 0 6 0 1 44.233 44.325 2 2.999E-10 11405 20230619_1886_Aki_TMTPro18x_K_F6 171.05 149.68 19222 18460 20512 18317 21738 23450 23575 23377 29159 32501 28176 24537 37315 26012 28546 32376 29043 27830 17803 16894 20736 18596 22531 23335 23836 24115 29387 32117 29323 25330 37334 27150 29228 32169 27775 26486 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18118000 19561 3941 18306 37086 29730 29730 1 9606 Homo sapiens -0.030588237641495652 NGSEADIDEGLYSR Unmodified 1524.6692 0.66922997 134 A0A024R1A3;P22314-2;P22314;Q5JRR9;Q5JRS0;Q5JRS2;Q5JRS1;Q5JRS3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 1 0 1 45.05 45.05 2 1.552E-46 12307 20230619_1880_Aki_TMTPro18x_K_F1 309.68 267.08 136310 123830 127210 132810 127050 145170 141750 149690 192650 191300 199970 184840 198310 179430 167610 217590 207240 194540 126060 113420 130020 133620 132520 146010 143680 153670 193680 190940 204590 187850 201100 187210 173440 216630 197810 185060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97357000 19562 134 18307 37087 29731;29732 29731 2 9606 Homo sapiens -0.07211787388700941 NGTLPWLRPDSK Unmodified 1382.7306 0.73064844 1192 A0A140VJP5;P31153;B4DEX8;P31153-2 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase yes no 0 0 1 3.5 0.5 1 1 51.43 51.476 3 0.062969 14800 20230619_1882_Aki_TMTPro18x_K_F3 45.992 25.886 322610 287710 358010 340240 315820 360850 330690 344250 397440 447350 433920 421370 494950 397100 381770 492060 447220 437800 298750 263770 359960 339680 331870 363000 334890 355540 402950 445750 445940 428200 497680 415500 394420 489610 427190 416430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168720000 19563 1192 18308 37088;37089 29733;29734 29733 2 9606 Homo sapiens 0.05459233891861004 NGVQAMVEFDSVQSAQR Oxidation (M) 1880.8687 0.86867484 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;M0R1W6;B4DPK8;B4DVF8;M0QYL7;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 1 0 4 0 1 42.846 42.889 3 0.00023325 10789 20230619_1883_Aki_TMTPro18x_K_F4 78.326 71.095 30402 26493 29763 30681 39028 42709 38720 32951 55998 38237 48261 52772 41321 41364 41247 40450 53178 54314 28118 24286 30436 30796 39826 42057 39560 34496 55683 38853 49601 52499 42449 42978 42597 41445 50772 51437 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80414000 19564 1455;1520 18309 37090 29735 29735 959 1 9606 Homo sapiens -0.03652475432454594 NGYDYGQCR Unmodified 1131.4404 0.44035643 3844 Q13242;A8K3M9;S4R3G0;B4DFT9 SRSF9 Serine/arginine-rich splicing factor 9 yes no 0 0 0 4 0 1 34.278 34.329 2 0.00015773 7264 20230619_1883_Aki_TMTPro18x_K_F4 146.23 127.5 47043 29190 44475 40760 54308 57613 49286 51613 64350 43577 53015 47652 53446 44912 51706 39768 64158 45347 43414 26848 45513 40431 55512 56831 50452 52906 64182 44645 54910 48112 54465 46157 53218 40408 61135 43080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39864000 19565 3844 18310 37091 29736 29736 1 9606 Homo sapiens -0.12010613375787216 NGYELSPTAAANFTR Unmodified 1610.7689 0.76888444 1203 B7Z478;A0A140VJS6;P49721;Q59FJ0 PSMB2 Proteasome subunit beta type-2;Proteasome subunit beta type yes no 0 0 0 7 0 1 51.346 51.424 2 0.0037759 14222 20230619_1887_Aki_TMTPro18x_K_F7 79.886 66.223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19566 1203 18311 37092 29737 29737 1 9606 Homo sapiens -0.012069249841260898 NGYGFINR Unmodified 939.45626 0.45626449 3745 P67809;Q6PKI6;Q7KZ24;C9J5V9;A0A024RAQ1;A0A384MDP4;B2RCC2;A0A024RAV4;P16989;Q59EB5;P16989-2;P16989-3;Q9Y2T7;Q96GD7 YBX1;CSDA;YBX3;YBX2 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 3;Y-box-binding protein 2 yes no 0 0 0 1.5 0.5 1 1 43.053 43.093 2 0.023583 11258 20230619_1881_Aki_TMTPro18x_K_F2 85.813 71.037 340550 281400 340790 358420 371640 433510 372970 402970 458320 275420 325320 281610 293550 241720 339670 273220 326200 232370 314910 258250 346760 356590 383920 431830 378650 410280 456110 285700 338470 284530 302790 252280 343430 272060 311590 221490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222080000 19567 3745 18312 37093;37094 29738 29738 1 9606 Homo sapiens -0.01588539076590223 NHAAPFSK Unmodified 870.4348 0.43480077 3544;769 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;O14992;A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72;B4DZB4 HSPA4;HEL-S-5a;HS24/p52;HSPH1 Heat shock 70 kDa protein 4;Heat shock protein 105 kDa no no 0 0 0 1.5 0.5 1 1 35.338 35.366 3 0.0025912 7824 20230619_1881_Aki_TMTPro18x_K_F2 93.649 41.785 69015 23172 53264 67323 76447 56070 72745 68121 91655 79174 84439 85469 88444 69181 59100 80985 78655 84221 63461 21664 55818 64122 77314 57823 74107 69088 91997 79626 87107 85913 88716 72554 61815 81312 75106 79939 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 511580000 19568 3544;769 18313 37095;37096 29739 29739 1 9606 Homo sapiens -0.005599241052891557 NHAPITTMK Oxidation (M) 1027.5121 0.51206481 2650 B4E2I9;Q99985 SEMA3C Semaphorin-3C yes no 0 1 0 8 0 1 32.523 32.523 3 0.0027618 6532 20230619_1888_Aki_TMTPro18x_K_F8 80.231 61.137 10663 3439.3 7362.3 8332.5 32552 19582 10165 11505 15418 8397.2 11422 12277 11826 10736 9191.8 9399.1 10004 8710.2 9797.3 3204.2 8110.4 8140.1 31112 18795 11702 12217 15257 8793.7 11925 12234 11937 11046 9438.5 9432.2 9554.6 8285 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5573500 19569 2650 18314 37097 29740 29740 1604 1 9606 Homo sapiens -0.0005907395127451309 NHCVPPYSESK Unmodified 1316.5819 0.58193529 4046 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes yes 0 0 0 6 0 1 35.351 35.404 3 0.0018584 7767 20230619_1886_Aki_TMTPro18x_K_F6 82.494 76.652 22760 6058.4 14081 19731 25224 14973 24622 25380 31038 27267 27274 26733 34895 25601 19401 30067 27725 28022 20891 5693.3 15215 18717 25231 15747 25041 25255 31112 27439 28467 27132 34613 26700 20519 29998 26448 26636 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21640000 19570 4046 18315 37098 29741 29741 1 9606 Homo sapiens -0.06369240073331639 NHDEESLECLCR Unmodified 1560.6297 0.62969012 1676;2901;949 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;A0A0A0MSA7;A0A8I5QJH9;A0A804HJV5;A0A8J9G7U8;A0A8I5KT99;A0A0U1RQK7;Q59GJ0;A0A8I5KV92;O43432-4;O43432;O43432-3;B4DZE1;B4DH17 EIF4G1;EIF4G1 variant protein;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 no no 0 0 0 1.5 0.5 1 1 38.515 38.547 3 7.366800000000001E-25 9420 20230619_1880_Aki_TMTPro18x_K_F1 263.74 202.5 86507 19424 50459 61714 69788 45534 66512 66957 88498 93040 90688 77764 111640 83047 45301 110430 74389 96489 79352 18280 54568 58569 70756 47773 67916 67615 89073 92163 93658 79898 110050 86994 49211 109550 71047 91713 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 243570000 19571 1676;2901;949 18316 37099;37100 29742;29743 29742 2 9606 Homo sapiens -0.12819953935422745 NHDHQEIAVPVANLK Unmodified 1683.8693 0.86926718 3311 O75607 NPM3 Nucleoplasmin-3 yes yes 0 0 0 5.5 0.5 1 1 43.229 43.317 4 1.5466E-07 10924 20230619_1886_Aki_TMTPro18x_K_F6 129.77 106.17 179680 91934 158990 177170 187040 139620 184970 207250 246000 200400 257520 228730 222930 182870 154050 244860 166990 198430 165600 85013 163670 171360 191620 145620 188570 206840 247360 203750 261800 229590 225260 193340 159110 242220 159860 188850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342170000 19572 3311 18317 37101;37102 29744;29745 29745 2 9606 Homo sapiens 0.05468732069584803 NHDVAQSEIR Unmodified 1167.5632 0.56324876 361 A0A024R5W0;Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 yes no 0 0 0 2 0 1 27.972 28.047 3 0.00050827 5015 20230619_1881_Aki_TMTPro18x_K_F2 88.596 50.358 7002.8 2833.3 7447.3 6389.6 6674.3 7041.4 5967.2 7923.7 10927 8532.5 10172 10422 11660 8098.8 8490.9 7935.1 9635 11392 6458.3 2631 7507.9 6166.9 6981.9 7085.1 6218.8 8043.9 10813 8651.1 10532 10411 11689 8435.3 8749.9 8172 9219.8 10777 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4563200 19573 361 18318 37103 29746 29746 1 9606 Homo sapiens -0.013830336528599219 NHEAQIQDMR Oxidation (M) 1256.5568 0.55678317 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 1 0 2.5 0.5 1 1 26.479 26.582 3 0.0019084 4526 20230619_1881_Aki_TMTPro18x_K_F2 81.525 70.599 1914.1 0 1783.2 1720.5 1829.6 1225.2 1560.9 903.68 3172.2 2457.7 2974.6 3960 3384 2947.4 1748.8 3330.9 2422.3 2191.3 1757.9 0 1821.1 1585.8 1887.1 1268.2 1637.7 991.16 3130.2 2449 3082.4 3913.5 3363.7 3089.8 1853 3273.8 2309.6 2094.2 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4131000 19574 3549 18319 37104;37105 29747 29747 2214 1 9606 Homo sapiens -0.061232948759197825 NHELSGLNK Unmodified 1010.5145 0.51450765 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;Q7Z2W4-3 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 0 6 0 1 37.315 37.383 3 9.6937E-09 8496 20230619_1886_Aki_TMTPro18x_K_F6 182.16 144.6 44932 14569 32121 42405 45156 38056 36029 41270 81297 53459 57928 61288 71194 64435 37530 72701 64558 76120 41293 13626 33930 40414 45668 38867 38232 42263 79254 53700 61064 61989 70703 66785 40446 73009 61587 72221 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36154000 19575 2740 18320 37106 29748 29748 1 9606 Homo sapiens 0.00967097778061543 NHGNPIIR Unmodified 919.4988 0.49879801 1738 H0YAV3;B4DMF8;B4E272;A0A804HK63;Q86XK2-2;Q86XK2-3;Q86XK2-6;Q86XK2;Q86XK2-5 FBXO11 F-box only protein 11 yes no 0 0 0 8 0 1 28.557 28.583 3 0.0017954 5147 20230619_1888_Aki_TMTPro18x_K_F8 110.81 73.162 9806.8 4736.2 8669.5 9509.2 11789 13396 9175 10009 16090 10945 11414 13518 14289 13219 7193.9 13706 10350 8539.6 9036.2 4384 8952 9249.3 11950 13163 9613.8 10481 15805 11107 12057 13591 14165 13654 7649.9 13463 9859.9 8172.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4061400 19576 1738 18321 37107 29749 29749 1 9606 Homo sapiens 0.03582856051673389 NHIILQENAQHATR Unmodified 1643.8492 0.84920044 1125 A0A0S2Z5E9;Q69YN2-3;Q69YN2;A0A286YF56 CWF19L1 CWF19-like protein 1 yes no 0 0 0 6 0 1 31.074 31.105 4 1.0742E-08 6180 20230619_1886_Aki_TMTPro18x_K_F6 158.81 143.61 15463 8401.9 15779 18027 18865 21552 20219 22594 20059 18529 23547 24721 20554 21180 19420 16666 22098 25790 14270 7780.4 16066 17443 19386 21526 20311 22894 20570 19128 23873 24684 21042 21719 19900 17343 21143 24385 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29389000 19577 1125 18322 37108 29750 29750 1 9606 Homo sapiens 0.05302981129602813 NHINNELK Unmodified 980.50394 0.50394296 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7;Q32P42;E7EN38 RAD50 DNA repair protein RAD50 yes no 0 0 0 5 0 1 34.323 34.41 3 1.6455E-05 7311 20230619_1885_Aki_TMTPro18x_K_F5 172.23 115.67 44017 10890 39289 56196 65935 37494 53680 58162 80879 61278 84041 72728 81348 75278 47318 49266 66070 74306 40488 10397 40763 52683 65829 39810 55663 58088 80895 62149 85809 73397 81528 76201 49760 51343 63091 70281 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96305000 19578 4309 18323 37109 29751 29751 1 9606 Homo sapiens 0.012911151236039586 NHIPITEQGDAPR Unmodified 1446.7215 0.72154031 4286 Q8WXD5 GEMIN6 Gem-associated protein 6 yes yes 0 0 0 3 0 1 35.063 35.123 3 6.5793E-07 7615 20230619_1882_Aki_TMTPro18x_K_F3 143.42 112.7 19546 10954 17142 17591 22997 21410 15449 22137 29991 21466 26173 24357 27716 25682 21916 26374 23488 24043 18019 10098 17692 17264 23229 21377 16481 22524 29555 21841 27073 24658 27977 26468 22500 26355 22462 22858 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51450000 19579 4286 18324 37110 29752 29752 1 9606 Homo sapiens 0.0160484053556047 NHIQLVK Unmodified 850.50249 0.5024864 694 A0A024RBT2;Q502X2;A0A0S2Z5U7;Q9NR28-2;Q9NR28;A0A0S2Z5P6;Q9NR28-3;K7X1S0;Q53HB7 DIABLO Diablo homolog, mitochondrial yes no 0 0 0 1.5 0.5 1 1 39.292 39.325 3 0.0010099 9479 20230619_1881_Aki_TMTPro18x_K_F2 154.09 115.86 436210 108170 258160 404250 454730 283950 391600 412410 583810 431600 579640 519830 534960 453740 381730 567730 458550 523440 400230 102120 280610 381650 454180 299200 404240 413090 583020 438050 592180 522020 540110 476100 396190 565670 438440 497390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 376240000 19580 694 18325 37111;37112 29753 29753 1 9606 Homo sapiens 0.07125525825529166 NHKGDTACDLAR Unmodified 1356.6204 0.62044606 3584 P42773;Q6ICV4 CDKN2C Cyclin-dependent kinase 4 inhibitor C yes no 0 0 1 5 0 1 30.265 30.341 4 1.2945E-06 5815 20230619_1885_Aki_TMTPro18x_K_F5 150.21 131.39 25942 7163.9 22500 23010 39499 21557 27738 28561 27450 24959 33121 18937 18193 14757 27197 8959 17991 12484 23863 6727 23370 21895 39195 22097 28647 28589 28193 25223 32977 19377 19445 15070 26886 9358.9 17265 11840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17227000 19581 3584 18326 37113 29754 29754 1 9606 Homo sapiens -0.04359934438821256 NHLLPDIVTCVQSSR Unmodified 1737.8832 0.88320269 4063 Q5TDE9;Q9BSD7 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase yes no 0 0 0 1.5 0.5 1 1 52.39 52.41 3 3.786E-14 15489 20230619_1881_Aki_TMTPro18x_K_F2 181.58 167.15 43002 18487 36607 39501 36774 30175 34765 40553 45556 43129 48570 35055 44894 39304 35946 46824 38333 47089 39596 17143 37717 38020 38085 31453 35535 40770 45910 43206 49420 36164 45512 40809 36907 46914 36714 44690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 471450000 19582 4063 18327 37114;37115 29755 29755 1 9606 Homo sapiens 0.04377641506357577 NHNEPFLDR Unmodified 1140.5312 0.53122035 2550 B4DND2;Q96H41;Q53H47-3;Q53H47 SETMAR Histone-lysine N-methyltransferase SETMAR;Histone-lysine N-methyltransferase;Transposon Hsmar1 transposase yes no 0 0 0 2.5 0.5 1 1 34.892 34.951 3 2.4139E-05 7564 20230619_1882_Aki_TMTPro18x_K_F3 157.99 140.75 31320 17079 23375 30697 42225 32824 27685 32329 39987 31082 32192 33862 32591 30411 28679 27657 29325 31322 28840 15771 24709 29878 41916 33034 29138 33019 39728 31582 33418 34114 33082 31330 29262 28053 28065 29704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33416000 19583 2550 18328 37116;37117 29756 29756 1 9606 Homo sapiens -0.03342401336021794 NHNVAVYSIQGR Unmodified 1356.6898 0.68984625 4049 Q5SGD2;Q5SGD2-4 PPM1L Protein phosphatase 1L yes no 0 0 0 2 0 1 35.695 35.752 3 0.0012745 7983 20230619_1881_Aki_TMTPro18x_K_F2 85.417 54.847 10902 8337.8 10824 12324 17227 14489 12519 14714 15962 14057 15862 15231 16007 17510 13877 12360 20937 16965 10076 7667 11100 12141 17231 14499 13007 14991 16064 14285 16279 15482 16266 17705 14527 12770 19937 16079 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15839000 19584 4049 18329 37118 29757 29757 1 9606 Homo sapiens 0.025768925722559288 NHPMTPEAVK Oxidation (M) 1138.5441 0.54409322 1097 P51659;A0A0S2Z4J1;B2R659;E7EPL9;A0A804HK65;A0A2R8YD50;P51659-2;P51659-3;B4DSD0;B4DDM5;A0A804HKU2;A0A2R8Y7L2;B4DI68;E7ET17;B3KSP2;E7ER27;Q59H27;A0A804HIG8 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 0 1 0 5 0 1 33.037 33.119 3 0.00053561 6780 20230619_1885_Aki_TMTPro18x_K_F5 96.171 66.638 20739 10718 16938 16463 24645 19797 20941 20831 27286 20112 22542 22603 25832 21471 22609 25711 26374 23911 19103 9879.4 17626 16197 24852 19801 21518 21187 27235 20456 23494 22808 26109 22407 23270 25661 25181 22739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54582000 19585 1097 18330 37119 29758 29758 674 1 9606 Homo sapiens -0.019637062681340467 NHPMTPEAVK Unmodified 1122.5492 0.5491786 1097 P51659;A0A0S2Z4J1;B2R659;E7EPL9;A0A804HK65;A0A2R8YD50;P51659-2;P51659-3;B4DSD0;B4DDM5;A0A804HKU2;A0A2R8Y7L2;B4DI68;E7ET17;B3KSP2;E7ER27;Q59H27;A0A804HIG8 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 0 0 0 6 0 1 36.267 36.327 3 2.5377E-06 8071 20230619_1886_Aki_TMTPro18x_K_F6 147.91 129.16 37127 19965 27676 30867 35082 34992 36112 35904 49272 36791 40966 45725 43884 39582 32751 48277 50555 38670 34185 18400 29027 30318 35899 35087 36742 36642 49081 37433 42564 45810 44207 41454 34563 47797 48116 36874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66857000 19586 1097 18330 37120 29759 29759 1 9606 Homo sapiens -0.007194024055024784 NHQEILK Unmodified 880.47667 0.47666558 237 A0A024R3D4;Q8ND24;E9PN76;Q8ND24-2 DKFZp547C195;RNF214 RING finger protein 214 yes no 0 0 0 5.5 0.5 1 1 34.682 34.749 3 0.0012929 7541 20230619_1886_Aki_TMTPro18x_K_F6 147.34 78.421 117860 36894 89468 123340 132890 93568 128040 131650 172910 134700 175020 167790 157540 147670 115250 107190 144600 161240 108350 34636 94045 116890 134180 97719 130720 131980 173510 137020 178560 168070 159420 150860 119510 111450 138190 152520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51919000 19587 237 18331 37121;37122 29760;29761 29761 2 9606 Homo sapiens 0.031646315832290384 NHQLEVTPK Unmodified 1064.5615 0.56145784 1996 A8K0J3;Q9H2K8;G3V1Q8;B3KPH9 TAOK3 Serine/threonine-protein kinase TAO3 yes no 0 0 0 6 0 1 36.264 36.324 3 0.00094238 8090 20230619_1886_Aki_TMTPro18x_K_F6 98.048 70.934 18029 9545.1 22409 21265 19947 17787 19030 24119 30393 24769 27596 24866 31392 24138 22815 29954 22807 25216 16668 8846.2 22346 20458 20866 18386 19614 24207 30194 25008 28577 25238 31489 25235 23391 29724 21839 23991 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28853000 19588 1996 18332 37123 29762 29762 1 9606 Homo sapiens 0.031759573291765264 NHSGNDERDEEDEERESK Unmodified 2173.8744 0.87442473 1028 A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0;B4E138 PHF6 PHD finger protein 6 yes no 0 0 2 1 0 1 23.216 23.216 5 3.4263E-24 3828 20230619_1880_Aki_TMTPro18x_K_F1 214.94 202.28 31086 3267.8 26216 34648 51291 19730 22597 27488 59706 36610 68270 63356 54522 61854 20848 19524 29821 47080 28550 3303.2 27399 32144 50330 21302 25608 27817 58948 37388 68911 62998 54560 61564 22287 21879 28565 44362 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67947000 19589 1028 18333 37124 29763 29763 1 9606 Homo sapiens -0.16555750177758455 NHSIILSAPNPEGK Unmodified 1475.7732 0.77324153 1876 A0A994J5I9;A0A994J596;J3KNU7;A0A994J599;A0A994J840;A0A994J7R2;A0A994J5V9;P32856-3;P32856-2;P32856 STX2 Syntaxin-2 yes no 0 0 0 8 0 1 44.528 44.546 3 3.945E-07 11295 20230619_1888_Aki_TMTPro18x_K_F8 137.8 117.41 25171 13674 21416 23129 26399 36272 24961 24106 37023 23747 25438 21250 26122 21188 24752 24635 20899 21937 23197 12616 22161 22725 27079 35365 25610 25452 36533 23990 26643 21705 26565 22044 24981 24554 20041 20861 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17842000 19590 1876 18334 37125 29764 29764 1 9606 Homo sapiens 0.054385842294323083 NHTLALTETGSVFAFGENK Unmodified 2035.0011 0.0010692176 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 8 0 1 57.27 57.322 3 5.541199999999999E-21 16660 20230619_1888_Aki_TMTPro18x_K_F8 193.72 167.57 96027 18712 73296 86884 81270 47821 78179 72486 110820 104710 101430 90391 114180 102100 62513 108710 75023 99838 88197 17850 76482 81503 83489 51879 80001 73270 110710 103700 104900 92837 113700 105260 65437 108520 71833 94830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 323210000 19591 617 18335 37126 29765 29765 1 9606 Homo sapiens 0.024968725759663357 NHVAAHGQSLLK Unmodified 1273.6891 0.68911797 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 2 0 1 33.55 33.608 4 0.023038 7127 20230619_1881_Aki_TMTPro18x_K_F2 63.091 38.237 25770 11928 17080 18432 25515 24492 23358 25173 38919 24122 36484 34913 31369 28604 23799 29445 25303 34260 23697 11003 18204 18153 25803 24320 24147 25633 38596 24794 37290 34754 31827 29747 24453 29831 24257 32456 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18212000 19592 4372 18336 37127 29766 29766 1 9606 Homo sapiens 0.06322097923225556 NIAFFSTNCVEGTAR Unmodified 1685.7832 0.78315429 3387 P05023;P05023-4;P05023-3;P05023-2 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 4.5 3.5 1 1 55.836 55.867 3 7.2617E-20 16784 20230619_1880_Aki_TMTPro18x_K_F1 217.19 204.69 75091 77210 95605 83716 74771 90168 98813 106360 123300 92161 111940 96620 111980 89512 97101 113540 102120 113610 69703 70697 95046 84184 79990 91059 99035 107130 123620 94079 115260 97772 113540 93867 99375 113660 97736 107870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 216670000 19593 3387 18337 37128;37129 29767;29768 29767 2 9606 Homo sapiens -0.03230595827471916 NIAIQSQFTR Unmodified 1176.6251 0.62512073 3440 P12270;P12270-2;Q58F23;Q504U6 TPR Nucleoprotein TPR yes no 0 0 0 2.5 0.5 1 1 46.74 46.819 2 1.0699E-06 12960 20230619_1881_Aki_TMTPro18x_K_F2 199.11 130.2 152370 140190 158140 165540 167880 191000 176500 152650 208190 167670 169250 146200 158140 124530 153730 153970 168790 161200 141040 128510 160370 165420 173900 190350 178380 159080 208640 168130 174840 148710 161500 130810 157230 154660 161300 153060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237150000 19594 3440 18338 37130;37131 29769 29769 1 9606 Homo sapiens 0.0438731776628174 NIAVETDVR Unmodified 1015.5298 0.52982336 2738 C9J4K0;Q9BVC5-2;Q9BVC5 C2orf49 Ashwin yes no 0 0 0 2.5 0.5 1 1 41.234 41.301 2 0.0005082 10172 20230619_1882_Aki_TMTPro18x_K_F3 133.32 98.026 92634 70779 86405 94099 106940 112270 107340 104200 136550 117550 123690 120400 127900 99192 112570 127670 127000 126040 85573 65006 88646 93330 109480 111960 109080 107360 136910 118220 127660 121410 129620 104570 115610 127700 121360 119730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75006000 19595 2738 18339 37132;37133 29770 29770 1 9606 Homo sapiens 0.022679645752418764 NIAVGKDPLEGQR Unmodified 1395.747 0.74702678 2670 B7SBB1;O00170;D0EKE4;A5JGZ4;A0A804HKH9;D0EKE6;D5LTB3;C8CK04;C8CHN4;C0JXB8;D0EKE5;C0JXB9;C8CK05;A0A804HJ38;A0A804HIX8;D2CVN5;V9GYQ3;A0A804HKK3;A0A804HKL7;A0A804HKP8;A7KS92 AIP AH receptor-interacting protein yes no 0 0 1 7 0 1 45.026 45.112 3 0.0014804 11359 20230619_1887_Aki_TMTPro18x_K_F7 84.173 58.854 1481100 1135600 1324000 1475900 1495000 1509200 1587300 1633700 1713800 1636100 1780000 1466400 1413000 1158200 1727600 1351800 1400100 1133900 1367800 1042700 1361400 1462900 1541100 1526600 1599300 1660200 1740900 1647900 1805600 1486500 1467900 1215100 1731000 1344700 1340900 1080300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 625550000 19596 2670 18340 37134 29771 29771 1 9606 Homo sapiens 0.06498315057956461 NICQFLVEIGLAK Unmodified 1503.8119 0.81193523 3166 Q6IAV3;K7EM18;P41567 SUI1;EIF1 Eukaryotic translation initiation factor 1 yes no 0 0 0 4 0 1 66.248 66.26 3 0.00098743 20927 20230619_1883_Aki_TMTPro18x_K_F4 85.554 71.201 5106.6 4793.1 5912.8 4100.4 7187.3 5722.9 9010.3 7374.6 6800.7 5925.7 5363.4 5409.2 7729.8 5769.9 7769.2 5955.6 6272.3 6381.8 4732.4 4381.9 5947.9 4230.3 7385.1 5710.9 8904.2 7380.8 6997.7 6050.3 5680.1 5528.1 7808.7 5955.4 7806.3 6012.3 6016.6 6056.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11173000 19597 3166 18341 37135 29772 29772 1 9606 Homo sapiens 0.0801817353963088 NICQQVNIK Unmodified 1115.5757 0.5757277 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 1 0 1 46.162 46.162 2 1.1717E-05 12752 20230619_1880_Aki_TMTPro18x_K_F1 190.54 135.16 101060 76444 75915 88357 90783 91301 106320 96124 108790 102380 90533 75308 103910 83932 82932 117250 106660 91340 93210 70113 79509 88307 93510 92253 106320 98047 110000 102340 94223 78081 104640 88066 86194 115740 101720 87086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55944000 19598 3152 18342 37136 29773 29773 1 9606 Homo sapiens 0.022562864857945897 NICVLAHVDHGK Unmodified 1361.6874 0.68740341 1523 H0YK75;A0A3B3ITU1;A0A8Q3SIF5;H0YKI9;Q7Z2Z2 EFTUD1 Elongation factor Tu GTP-binding domain-containing protein 1 yes no 0 0 0 8 0 1 42.385 42.388 4 2.5499E-05 10459 20230619_1888_Aki_TMTPro18x_K_F8 121.04 90.558 57356 38578 43184 48413 41573 56908 56964 49575 75557 54121 50339 52140 58766 40496 43749 68628 78876 66288 52869 35429 45075 48186 43876 56701 57067 51294 74853 54445 53196 52656 58992 43690 46820 68291 75042 63032 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38354000 19599 1523 18343 37137 29774 29774 1 9606 Homo sapiens 0.021027208429359234 NIDDGTSDRPYSHALVAGIDR Unmodified 2271.088 0.087986745 166 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7 RPL27 60S ribosomal protein L27 yes no 0 0 1 4.33 1.49 1 2 2 2 1 1 44.551 44.622 3;4 5.6804E-45 11642 20230619_1882_Aki_TMTPro18x_K_F3 218.16 194.36 321040 239990 308810 368250 305240 407290 369010 378730 389680 488460 419110 472430 503280 416960 372000 498360 491240 556720 296610 220800 315140 361610 319590 407900 369090 391760 397640 487090 432550 478140 504750 436450 387880 502350 469320 527920 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1159600000 19600 166 18344 37138;37139;37140;37141;37142;37143;37144;37145;37146 29775;29776;29777;29778;29779;29780 29775 6 9606 Homo sapiens 0.003286270597982366 NIDEDELLGK Unmodified 1144.5612 0.56118307 2139 A8K9L8;Q9NZR1;Q9NZR1-2 TMOD2 Tropomodulin-2 yes no 0 0 0 2 0 1 54.477 54.501 2 0.0016831 16371 20230619_1881_Aki_TMTPro18x_K_F2 119.22 80.931 54616 52266 59202 68113 45907 50487 51048 49575 60934 76499 76849 84356 80130 68605 74339 87205 93096 95122 50591 47954 59601 67240 48873 52384 51527 51480 62224 76077 78292 84712 81419 72278 76800 87734 88906 90256 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29753000 19601 2139 18345 37147 29781 29781 1 9606 Homo sapiens -0.00531507181312918 NIDEHANEDVER Unmodified 1439.6277 0.62769951 3687 P61026;Q53T70 RAB10 Ras-related protein Rab-10 yes no 0 0 0 1 0 1 32.373 32.373 3 8.2997E-18 6900 20230619_1880_Aki_TMTPro18x_K_F1 219.35 196.81 69068 52121 69234 69338 84722 75131 66234 74690 93497 81486 96142 89871 92021 87525 84636 78687 111640 95940 63835 47872 70510 68688 86188 75567 68743 76495 93785 82281 98278 90777 93785 89879 87639 80216 106450 90999 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1727099999.9999998 19602 3687 18346 37148 29782 29782 1 9606 Homo sapiens -0.07452923357413965 NIDEQPKPLTDSQR Unmodified 1639.8166 0.81656291 1608 Q5TA58;B3KME0;B2RAD8;A0A6I8PTZ8;Q9UL18;A0A8V8TNY0;A0A8V8TQA7 AGO1 Protein argonaute;Protein argonaute-1 yes no 0 0 1 4 0 1 40.292 40.334 3 0.0030509 9698 20230619_1883_Aki_TMTPro18x_K_F4 72.075 60.052 39241 29784 37163 40746 50439 51009 46780 45764 50467 49946 58192 55752 47721 45053 50903 46205 57296 43805 36253 27364 38142 40367 51208 50684 47494 47224 51507 50428 58874 55963 49219 46856 52027 46308 54665 41682 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26841000 19603 1608 18347 37149 29783 29783 1 9606 Homo sapiens 0.02224729216072774 NIDINDVTPNCR Unmodified 1429.662 0.66197652 1202 P62195;A0A140VJS3;P62195-2;Q59GS3;J3QSA9;J3KRP2;J3QRR3;J3QLH6;J3QRW1;A0A994J6H0 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 4.5 0.5 1 1 47.043 47.103 2 6.3522E-18 12626 20230619_1883_Aki_TMTPro18x_K_F4 237.84 208.37 143710 125950 122860 144060 122320 152610 148600 138200 167430 166690 158280 154480 191680 135690 136380 202650 197410 182600 132790 115440 126690 144110 128000 153340 148860 142990 169210 166590 164200 156830 191830 144240 143380 201220 188190 173700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196870000 19604 1202 18348 37150;37151 29784 29784 1 9606 Homo sapiens -0.03566798470114918 NIDNFLSR Unmodified 977.49304 0.49304393 1153 A0A0U1RQV4;D9ZGF8;Q13464 ROCK1 Rho-associated protein kinase;Rho-associated protein kinase 1 yes no 0 0 0 7 0 1 47.63 47.718 2 0.029833 12518 20230619_1887_Aki_TMTPro18x_K_F7 80.229 37.36 160260 98009 143230 135120 120580 147970 148820 143960 88379 155090 182720 187490 202910 149450 170750 186120 216040 184430 147820 90142 146540 133590 127790 148490 146710 147680 97446 156930 183970 187610 204750 157430 176760 186310 206040 175300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96896000 19605 1153 18349 37152 29785 29785 1 9606 Homo sapiens 0.003397127493371954 NIDNPALADIYTEHAHQVVVAK Unmodified 2417.2339 0.2339227 4000 Q59ER5;Q53H17;Q53GN4;A0A8V8TNU2;A0A8V8TNT7;O75083;A0A8V8TP22;A0A8V8TQ74;A0A8V8TQK0;V9HWG7;A0A8V8TP31;D6RD66;B3KXN4;B4DS71 WDR1;HEL-S-52 WD repeat-containing protein 1 yes no 0 0 0 7 0 1 52.864 52.934 4 6.889E-05 14925 20230619_1887_Aki_TMTPro18x_K_F7 80.859 74.355 33593 33857 61401 47538 53009 54992 59391 71372 45196 68392 56758 76917 77763 36526 49311 70482 72136 66372 31320 31084 59852 47025 55741 55408 59157 71642 47457 69403 58727 76251 77159 40925 52014 69977 68758 63105 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 281950000 19606 4000 18350 37153 29786 29786 1 9606 Homo sapiens 0.08199509575797492 NIDPKPCTPR Unmodified 1196.5972 0.59719142 1118 K7EQ55;K7EK33;A0A0S2Z569;Q96EP5-2;Q96EP5;Q5IRN2 DAZAP1;DAZAP1/MEF2D fusion DAZ-associated protein 1 yes no 0 0 1 7.5 0.5 1 1 37.351 37.376 3 0.00055915 8411 20230619_1888_Aki_TMTPro18x_K_F8 108.31 80.108 498010 396390 460600 466450 577170 545130 557400 537570 580370 603390 652700 480340 581450 425330 562890 521820 527090 311050 460130 363550 472690 466480 589040 545410 563900 551340 592980 602460 662000 491830 594170 445730 570440 511360 503170 298460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 534630000 19607 1118 18351 37154;37155 29787;29788 29788 2 9606 Homo sapiens 0.006756715145229464 NIDQCSEIVK Unmodified 1204.5758 0.57578728 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494BZX8 RAD50 DNA repair protein RAD50 yes no 0 0 0 3.5 0.5 1 1 45.824 45.884 2 0.00015399 12110 20230619_1883_Aki_TMTPro18x_K_F4 156.48 138.62 45631 36224 42970 49472 45736 52746 51009 52550 61800 58883 63944 71667 67629 62269 61039 80752 86359 88575 42165 33274 43958 48901 47466 53069 51465 53872 62428 59563 65717 71868 68659 65502 63690 81221 82398 84038 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51825000 19608 4309 18352 37156;37157 29789 29789 1 9606 Homo sapiens -0.018317583048428787 NIDQQIK Unmodified 857.46068 0.46068117 4075 Q5VTL8;A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B yes no 0 0 0 5 0 1 41.944 42.029 2 0.0132 10358 20230619_1885_Aki_TMTPro18x_K_F5 119.29 58.531 75934 46665 85216 97435 107770 117230 98336 106780 126770 83027 119610 125360 117570 104370 123600 77340 146460 132840 70176 43165 86205 94370 109910 116700 100590 109180 127060 86552 123030 124580 120400 106970 126570 81420 139810 125640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37473000 19609 4075 18353 37158 29790 29790 1 9606 Homo sapiens 0.02624925346344753 NIEDVIAQGIGK Unmodified 1255.6772 0.67721588 712 P05387;A0A024RCA7;H0YDD8 RPLP2 60S acidic ribosomal protein P2 yes no 0 0 0 6.5 1.12 1 1 1 1 62.064 62.105 3 7.6084E-08 18660 20230619_1888_Aki_TMTPro18x_K_F8 167.2 123.9 4948200 4229400 4655400 5222100 4328800 5419900 5110000 5347000 5936600 6279000 6004000 5833700 6560100 5544200 5881300 7050300 5758000 6362900 4574500 3879800 4752800 5194700 4549800 5462600 5134300 5491800 6007000 6282000 6180100 5934600 6644500 5807900 5992500 7019100 5514600 6048500 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 11680000000 19610 712 18354 37159;37160;37161;37162 29791;29792;29793;29794;29795 29795 5 9606 Homo sapiens 0.059604363893640766 NIEDYIHR Unmodified 1058.5145 0.51450765 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 0 0 4.5 0.5 1 1 44.544 44.606 3 1.3361E-11 11536 20230619_1883_Aki_TMTPro18x_K_F4 219.51 115.94 76747 57396 66227 78509 78333 81150 75392 81342 99765 85640 90531 87349 97156 87975 91169 97406 97515 99458 70847 52735 68395 77559 80356 81863 76949 83191 99865 86415 93588 88654 98708 91210 93197 97838 93254 94436 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199350000 19611 117 18355 37163;37164 29796;29797 29796 2 9606 Homo sapiens -0.012409022219571852 NIEELQQQNQR Unmodified 1398.6852 0.68515481 3440 P12270;P12270-2;Q58F23;Q504U6;A0PJC9 TPR Nucleoprotein TPR yes no 0 0 0 3 0.816 1 1 1 40.165 40.221 3 2.0039E-12 9707 20230619_1882_Aki_TMTPro18x_K_F3 162 139.81 98194 59057 86288 95623 103380 116610 111520 95064 122590 119300 102680 123660 131470 107000 113910 116130 129320 120750 90556 54427 88972 93760 106300 115780 112250 99300 123550 119440 107700 124650 132420 111440 116990 116830 123520 114670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285470000 19612 3440 18356 37165;37166;37167 29798 29798 1 9606 Homo sapiens 0.0017596363886696054 NIEIDSPYEISR Unmodified 1434.6991 0.69907354 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 3 0.816 1 1 1 52.736 52.774 2 8.3526E-18 15344 20230619_1882_Aki_TMTPro18x_K_F3 236.23 198.63 175690 150440 162100 176970 162670 192680 199980 189910 206860 227790 229550 244910 269180 214810 224770 266690 242120 254740 162390 137930 165930 176770 170020 193580 199690 195250 211400 228660 236280 246820 271240 225360 230540 266380 231580 242040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 775620000 19613 3384 18357 37168;37169;37170 29799;29800 29800 2 9606 Homo sapiens -0.0008880365269305912 NIELICQENEGENDPVLQR Unmodified 2269.0645 0.06447411 2536 Q15691;B4DM33 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes no 0 0 0 2 0.816 1 1 1 55.061 55.081 3 1.7938E-49 16610 20230619_1881_Aki_TMTPro18x_K_F2 280.26 266.83 158140 137340 156000 155340 125100 143140 151730 146490 145440 183620 194510 165600 206150 170850 186000 215150 189620 197410 146270 125880 158170 155320 133100 145790 151370 150460 150630 182980 197590 169280 209000 178430 189860 214420 181450 187660 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2733000000 19614 2536 18358 37171;37172;37173 29801;29802;29803 29802 3 9606 Homo sapiens -0.01929554769048991 NIEMTQEDVR Oxidation (M) 1249.5609 0.5608655 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 1 0 1.5 0.5 1 1 36.102 36.131 2 0.00010938 8387 20230619_1880_Aki_TMTPro18x_K_F1 140.78 121.8 57764 46411 48729 61441 65517 65995 68726 58534 83329 65547 81608 69857 73147 59699 60745 72647 76696 67763 53338 42615 50582 60841 66799 66230 69511 60543 83908 66049 83337 70434 74328 62601 62931 72494 73166 64446 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142300000 19615 3312 18359 37174;37175 29804 29804 1947 1 9606 Homo sapiens -0.053932501728468196 NIEMTQEDVR Unmodified 1233.566 0.56595087 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 2 0 1 41.415 41.492 2 3.6264E-05 10476 20230619_1881_Aki_TMTPro18x_K_F2 152.04 116.75 68298 52275 71282 78015 69984 79774 94326 90516 109300 89269 101360 94605 100350 87543 85165 86964 108320 102540 63150 48074 72207 76677 73462 80739 94128 91705 110080 90479 104270 95575 101770 90523 88150 88277 103370 97247 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81534000 19616 3312 18359 37176 29805 29805 1 9606 Homo sapiens -0.04148946310215251 NIEPTHAPFIEK Unmodified 1394.7194 0.71941505 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;A0A804HL78;O94854;H0Y314 MACF1;KIAA0754 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5;Uncharacterized protein KIAA0754 yes no 0 0 0 6 0 1 47.635 47.716 3 0.00020495 12937 20230619_1886_Aki_TMTPro18x_K_F6 97.273 71.154 124280 110310 108980 132320 127180 163660 153760 141870 184760 157030 156220 146640 159780 141920 133670 186890 179300 183780 114870 101150 112450 132190 131620 162560 154350 146850 185250 157670 161690 149290 161830 148920 139200 186740 171140 174570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126860000 19617 1566 18360 37177 29806 29806 1 9606 Homo sapiens 0.03784411797755638 NIEYPVDLEISK Unmodified 1418.7293 0.72931103 1642 A0A7G6J4N4;Q14694;Q14694-3;Q14694-2;Q6P2I0;H3BQP1 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 0 0 0 5 0 1 60.581 60.631 3 2.5027E-05 18148 20230619_1885_Aki_TMTPro18x_K_F5 105.14 61.148 43701 36139 38904 41276 35062 38234 39447 37477 43547 49642 40681 46141 52845 37981 43854 50990 47421 51417 40375 33131 39871 41235 36852 38893 39656 38678 44082 49398 42443 46694 53076 40175 44989 51032 45365 48817 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46017000 19618 1642 18361 37178 29807 29807 1 9606 Homo sapiens 0.03669555012447745 NIFIECTGTDFTK Unmodified 1544.7181 0.71809442 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 6.2 0.748 1 2 2 60.18 60.232 2;3 1.5306E-15 18191 20230619_1886_Aki_TMTPro18x_K_F6 167.89 154.21 235180 200600 220530 235330 200070 232170 233680 242480 257920 277250 283550 271940 296420 256580 251920 311560 301500 325510 217410 183930 225030 234830 210470 235270 234530 247930 262520 278130 290170 275890 300070 268120 260030 312800 288160 308940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1001699999.9999999 19619 4414 18362 37179;37180;37181;37182;37183 29808;29809;29810;29811 29809 4 9606 Homo sapiens -0.03247590353316809 NIGLGFK Unmodified 747.42792 0.42792448 3713 P62280;M0QZC5 RPS11 40S ribosomal protein S11 yes no 0 0 0 3 0.816 1 1 1 52.81 52.849 2 0.0077463 15383 20230619_1882_Aki_TMTPro18x_K_F3 122.78 24.643 2026100 1706800 1707700 1868000 1813700 2128100 2127400 2014200 2364500 2241300 2060800 1914700 2509200 1896300 1958100 2530400 2002600 2028300 1871400 1564000 1764100 1877200 1885800 2129900 2133600 2071600 2384100 2243700 2147000 1959200 2518800 1990900 2006500 2503000 1915800 1931800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2667900000 19620 3713 18363 37184;37185;37186 29812;29813;29814 29813 3 9606 Homo sapiens 0.044107630141297705 NIGNTFFK Unmodified 939.48142 0.48141661 2866 Q6FGM6;E5KN59;E5KN55;Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes no 0 0 0 3 0 1 54.025 54.077 2 0.0021654 15946 20230619_1882_Aki_TMTPro18x_K_F3 131.06 59.041 170140 143010 148470 168500 165890 199630 172350 172350 198880 205630 203680 185970 209360 174610 177640 218790 202010 205540 157180 131130 153030 168460 171320 198860 174240 178830 201390 205460 208850 189380 211970 182850 182770 218300 193070 195350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 242720000 19621 2866 18364 37187 29815 29815 1 9606 Homo sapiens 0.009255157259985936 NIGPLVK Unmodified 739.45922 0.4592246 1339 E5KRK5;A0A291FIZ5;P28331-4;P28331;P28331-2;P28331-5;B4DJ81;P28331-3 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 2 0 1 48.623 48.688 2 0.03441 13856 20230619_1881_Aki_TMTPro18x_K_F2 93.262 45.356 171610 162940 176440 193180 235990 260060 221300 191190 246630 178960 217960 201570 218600 203040 176780 225200 242360 201030 158880 149360 179840 193420 240010 256330 224660 199850 248460 182460 224850 203840 221290 210430 184360 224490 230970 191350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109640000 19622 1339 18365 37188 29816 29816 1 9606 Homo sapiens 0.07907336048231173 NIGVDNPAAK Unmodified 997.51926 0.51925868 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 6 0.816 1 1 1 43.236 43.32 2 1.1536E-06 10623 20230619_1887_Aki_TMTPro18x_K_F7 202.2 150.42 330570 229940 302910 320990 369420 400850 358970 337780 472330 393870 457310 427260 457040 381160 388330 367530 514470 430430 305170 211380 311110 317590 378380 397780 365960 350970 473890 396350 469580 430630 463260 394110 402880 373210 490440 408460 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 693980000 19623 3756 18366 37189;37190;37191 29817;29818;29819 29819 3 9606 Homo sapiens 0.020399819207909786 NIHGYMK Oxidation (M) 877.41162 0.41162248 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90 RAD50 DNA repair protein RAD50 yes no 0 1 0 1 0 1 34.686 34.686 3 0.014918 7853 20230619_1880_Aki_TMTPro18x_K_F1 79.116 46.275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19624 4309 18367 37192 29820 29820 2724 1 9606 Homo sapiens -0.031986862142503014 NIHINPHFK Unmodified 1118.5985 0.59851205 2601 B4DVQ2;H0Y3K4;Q96EV2;H7C0H2 RBM33 RNA-binding protein 33 yes no 0 0 0 3 0 1 40.608 40.667 4 0.0014055 9904 20230619_1882_Aki_TMTPro18x_K_F3 98.033 71.247 37329 29647 37042 38364 35202 41838 40263 39620 42255 45876 44313 43541 44136 38896 36623 49675 48430 52883 34508 27217 37637 38071 36865 41982 40377 40797 43042 45951 45349 44158 44715 40851 38099 49882 46254 50179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29141000 19625 2601 18368 37193 29821 29821 1 9606 Homo sapiens 0.04395673665612776 NIHLNLDR Unmodified 993.53558 0.53557744 6 A0A023T787;Q9Y5S9;Q9Y5S9-2;A0A0J9YW13 RBM8;RBM8A RNA-binding protein 8A yes no 0 0 0 6.5 0.5 1 1 39.979 40.055 3 0.0003615 9538 20230619_1886_Aki_TMTPro18x_K_F6 145.16 82.441 226200 159610 184560 217030 241850 311760 259340 233160 342130 154090 170100 149790 175070 148130 198030 170820 169760 153380 208670 146670 192090 215540 247740 306050 262740 241560 336360 160330 182770 152400 179660 154040 199250 170430 162590 145930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 538250000 19626 6 18369 37194;37195 29822;29823 29822 2 9606 Homo sapiens 0.038551078775640235 NIHLNLDRR Unmodified 1149.6367 0.63668847 6 A0A023T787;Q9Y5S9;Q9Y5S9-2;A0A0J9YW13 RBM8;RBM8A RNA-binding protein 8A yes no 0 0 1 2 0 1 35.63 35.687 3 0.00018728 7947 20230619_1881_Aki_TMTPro18x_K_F2 122.33 69.002 60629 43053 49397 54870 70014 75633 70892 65723 84445 27191 31062 30340 29850 26619 43134 28160 35065 22882 55929 39536 51464 54698 71146 74662 71769 66808 82942 29758 34360 30569 31165 27644 43094 28036 33544 21834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57141000 19627 6 18370 37196 29824 29824 1 9606 Homo sapiens 0.06785559580271183 NIHPIYNIK Unmodified 1110.6186 0.61857879 3863 Q13601;Q13601-2 KRR1 KRR1 small subunit processome component homolog yes no 0 0 0 3 0 1 45.162 45.238 3 0.0021077 11941 20230619_1882_Aki_TMTPro18x_K_F3 86.136 70.245 209860 168950 188040 220290 238900 235430 243650 238430 255070 219080 254080 216530 211560 180620 244540 256410 255010 222940 193870 155100 193770 218400 244050 237030 245710 242880 259010 222390 258700 218990 218860 191450 248730 254550 243670 212220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134540000 19628 3863 18371 37197 29825 29825 1 9606 Homo sapiens 0.0676942460556802 NIIHGSDSVESAEK Unmodified 1484.7107 0.71070086 1446 A0A384MTW7;P15531;P15531-2 NME1 Nucleoside diphosphate kinase A yes no 0 0 0 3.83 1.34 1 2 1 1 1 39.266 39.334 3 1.1655E-06 9629 20230619_1885_Aki_TMTPro18x_K_F5 121.79 98.67 153680 97856 163770 193180 197850 189680 196650 161990 151120 173240 211910 255410 208860 146800 194520 209600 252030 288950 141980 90417 166190 186980 202370 191370 196940 167930 159040 176830 214770 251740 212410 158530 201310 213960 240840 273470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 880370000 19629 1446 18372 37198;37199;37200;37201;37202;37203 29826;29827 29827 2 9606 Homo sapiens -0.012266066293932454 NIIHGSDSVK Unmodified 1068.5564 0.55637247 3490;3276 O60361;Q32Q12;P22392-2;Q6FHN3;P22392 NME2P1;NME1-NME2;NME2 Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 0 0 5.67 2.62 1 1 1 38.035 38.072 3 8.1058E-06 8920 20230619_1881_Aki_TMTPro18x_K_F2 155.97 116.05 171640 135500 159460 171620 201090 192300 191260 184860 214250 198670 230850 218550 221940 169410 182880 225470 260910 230330 158580 124370 163660 170610 205120 192800 194130 189760 217580 200650 235540 219400 224880 179420 191180 225820 248670 218830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 186720000 19630 3276;3490 18373 37204;37205;37206 29828;29829 29828 2 9606 Homo sapiens 0.024836534665837462 NIILEEGK Unmodified 914.5073 0.50729701 3495 V9HWI5;P23528;G3V1A4;E9PK25;E9PP50;B4E112;E9PQB7;E9PLJ3;E9PS23 HEL-S-15;CFL1 Cofilin-1 yes no 0 0 0 4.5 2.29 2 2 2 2 2 2 2 2 49.8 49.86 2;3 0.0011798 13856 20230619_1883_Aki_TMTPro18x_K_F4 157.91 43.629 3104000 2108700 2507300 2948500 2620000 3288800 2994700 2891200 3855200 3908700 4107100 4253100 4867800 3746600 3056900 5006200 5216700 4850800 2862600 1938800 2601500 2911600 2728700 3289200 3024200 3008900 3889900 3906900 4233500 4286000 4857400 3949500 3270000 4995600 4967900 4610300 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 19103000000 19631 3495 18374 37207;37208;37209;37210;37211;37212;37213;37214;37215;37216;37217;37218;37219;37220;37221;37222 29830;29831;29832;29833;29834;29835 29832 6 9606 Homo sapiens 0.04662365177625816 NIILGGVK Unmodified 812.51199 0.51198846 134 A0A024R1A3;P22314-2;P22314;Q5JRR9;Q5JRS0;Q5JRS2;Q5JRS1;Q5JRS3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 3 0 1 52.553 52.612 3 0.0039785 15295 20230619_1882_Aki_TMTPro18x_K_F3 94.302 29.265 127420 110110 115560 115090 139370 168410 145200 142820 182190 37652 43248 33436 36453 31822 81792 38994 40349 31363 117780 100850 118770 116560 143230 165630 147080 144850 177470 43855 50648 34222 39615 33246 79846 38787 38944 29903 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145660000 19632 134 18375 37223 29836 29836 1 9606 Homo sapiens 0.09823294111049563 NIINEEDADTMR Unmodified 1419.63 0.63000769 4397 Q96T23-2;Q96T23;H0YER1;Q05DG0;H7C306 RSF1 Remodeling and spacing factor 1 yes no 0 0 0 1 0 1 45.395 45.395 2 3.7076E-31 12452 20230619_1880_Aki_TMTPro18x_K_F1 275.48 219.93 50343 40752 49808 50588 46917 51900 49841 50742 62427 61917 59578 62628 65932 59035 54385 72454 73943 69505 46544 37392 50598 50305 49061 52361 50491 52219 62796 62008 61548 63427 66585 61708 56682 72376 70529 66063 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40596000 19633 4397 18376 37224 29837 29837 1 9606 Homo sapiens -0.06302210943954378 NIINSDGGPYVCR Unmodified 1463.6827 0.68271197 2815 D3DSC5;H9KV31;O15394-2;O15394;B7Z5K2 NCAM2 Neural cell adhesion molecule 2 yes no 0 0 0 7 0 1 46.557 46.645 2 1.076E-07 12026 20230619_1887_Aki_TMTPro18x_K_F7 164.43 129.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19634 2815 18377 37225 29838 29838 1 9606 Homo sapiens -0.030582080904650866 NIIQQAIDAGEVPSYNAFVK Unmodified 2176.1164 0.11643333 50 Q8WXX5;A0A024QZN2;Q2VIL4 DNAJC9;hCG_2024613 DnaJ homolog subfamily C member 9 yes no 0 0 0 8 0 1 63.971 63.993 3 9.9011E-08 19532 20230619_1888_Aki_TMTPro18x_K_F8 101.49 86.798 24202 23785 25197 26487 21440 24785 27862 25779 28192 36079 38985 40719 37203 33606 41689 39027 40343 49116 22414 21787 25468 26516 22738 25224 27742 26555 29155 36032 39439 40873 38245 35194 42228 39702 38673 46512 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128680000 19635 50 18378 37226 29839 29839 1 9606 Homo sapiens 0.07541976707034337 NIIRPQLK Unmodified 980.6131 0.61309948 3784 Q01780-2;Q01780;B4DKG8;Q59G73;B4DFE4 EXOSC10 Exosome component 10 yes no 0 0 1 5 0 1 42.699 42.782 3 0.00097325 10675 20230619_1885_Aki_TMTPro18x_K_F5 113.91 43.921 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19636 3784 18379 37227 29840 29840 1 9606 Homo sapiens 0.12201745813752041 NIISLLNVFTPQK Unmodified 1485.8555 0.8555146 1288 P45984-2;A0A286YFD7;A0A286YEN5;P53779;P45984-3;A0A286YES9;A0A286YFJ6;B7Z1Z1;A0A286YF19;A0A286YF35;P45984-4;D6RJF9;A0A286YEQ0;A0A286YFI3;A0A286YEQ7;A0A286YEX7;A0A286YFC0;A0A1P0B7D2;P53779-3;P53779-2;A0A286YFJ4;A0A286YF02;A0A286YFE2;A0A286YEW9;D7R526;F8W9R5;A0A286YF62;A0A286YF83;A0A286YFM6;A0A286YFA6;P45984;A0A286YF97;A0A286YEY0;A0A286YF85;A0A286YEV3;A0A286YES0;A0A286YFN2;A0A286YFB6;B5BUJ7;E5RJ57;A0A286YFK3;A0A1W2PRF2;P45984-5;J3KNK1;D6RCB1;D7R525;D6R9C1 MAPK9;MAPK10 Mitogen-activated protein kinase 9;Mitogen-activated protein kinase 10;Mitogen-activated protein kinase yes no 0 0 0 7 0 1 65.904 65.929 3 2.1747E-05 20474 20230619_1887_Aki_TMTPro18x_K_F7 124.51 104.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19637 1288 18380 37228 29841 29841 1 9606 Homo sapiens 0.1320210630838119 NIITNLSK Unmodified 901.52328 0.52328142 2724 P11387;B9EG90 TOP1 DNA topoisomerase 1 yes no 0 0 0 2.5 0.5 1 1 51.167 51.225 2 0.00010892 14668 20230619_1882_Aki_TMTPro18x_K_F3 179.17 70.161 678650 561890 607750 653390 613250 745290 669850 664660 753370 712180 710300 670850 809970 614400 639500 849670 822610 769970 627030 515200 623690 653600 638860 744750 674800 685870 761190 716120 734750 681490 815090 648370 664530 844940 784940 732360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 892910000 19638 2724 18381 37229;37230 29842;29843 29843 2 9606 Homo sapiens 0.06858071414512779 NILASNPR Unmodified 883.48756 0.48756462 448 A0A024R7G4;Q9NVP2;K7ES22;B4DXU6;Q9Y294 ASF1B;ASF1A Histone chaperone ASF1B;Histone chaperone ASF1A yes no 0 0 0 5.75 2.77 1 2 1 38.71 38.727 2 0.0014143 8937 20230619_1888_Aki_TMTPro18x_K_F8 143.01 91.664 349360 286860 306360 338050 377700 399440 405520 391810 521230 373920 371280 367070 434430 322000 331520 413780 417290 347300 322720 263070 316070 338030 387550 399150 410600 400300 518120 378960 390610 371560 436310 338610 344070 410410 397950 330830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 533520000 19639 448 18382 37231;37232;37233;37234 29844;29845;29846 29846 3 9606 Homo sapiens 0.04116033957518539 NILDSKPTANKK Unmodified 1327.746 0.74596415 676 Q9ULV4-3;Q9ULV4-2;Q9ULV4;Q59EA2;A0A024RBI5;B3KN06;Q53G58;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 CORO1C Coronin-1C;Coronin yes no 0 0 2 3.5 0.5 1 1 43.1 43.155 4 0.0029209 10894 20230619_1882_Aki_TMTPro18x_K_F3 81.239 59.041 122150 104150 114550 119760 148780 148050 153540 131450 175240 148800 203750 188110 178140 139470 166180 205680 220350 178790 112920 95480 117540 120050 151850 147250 155150 135970 178250 150690 206460 187710 182020 148940 172390 204010 210020 170260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 364670000 19640 676 18383 37235;37236 29847 29847 1 9606 Homo sapiens 0.09520100689064748 NILEESLCELVAK Unmodified 1516.7807 0.78069468 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7 0 1 64.944 64.971 3 0.083523 20038 20230619_1887_Aki_TMTPro18x_K_F7 37.657 27.605 28015 25155 28791 31743 27096 27291 31059 32040 33077 34742 36969 35994 42311 38330 36756 48356 37626 45812 25926 23077 29171 31462 28359 28053 31163 32482 33751 35002 37975 36599 42762 39978 37590 48255 36048 43509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145250000 19641 3758 18384 37237 29848 29848 1 9606 Homo sapiens 0.042975557148793087 NILETLLQMK Unmodified 1201.674 0.67404476 3761 P82673 MRPS35 28S ribosomal protein S35, mitochondrial yes yes 0 0 0 3.5 0.5 1 1 65.803 65.825 3 0.0005297 20744 20230619_1883_Aki_TMTPro18x_K_F4 100.48 69.046 10247 9625.8 6523.8 9931.3 8915.9 10727 10839 10455 9607.1 12041 9321.2 9709.6 11449 8114.8 10359 11091 10130 9391.5 9455.5 8812.6 6996.4 10014 9134.5 10783 10773 10742 9864.2 12006 9675.8 9904 11553 8587.9 10543 11001 9689.6 8940.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11826000 19642 3761 18385 37238;37239 29849 29849 1 9606 Homo sapiens 0.08127470011004334 NILFVITKPDVYK Unmodified 1548.8916 0.89156576 648 F8VZJ2;A0A7I2V2K5;A0A024RB41;H0YHX9;A0A7I2V473;Q13765;E9PAV3-2;E9PAV3;F8W0W4;F8VNW4;F8VZ58;A8K6N6;Q9BZK3 NACA;hCG_2016482;NACAP1 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form;Putative nascent polypeptide-associated complex subunit alpha-like protein yes no 0 0 1 4.5 0.5 1 1 62.052 62.078 3 3.2382E-06 18818 20230619_1885_Aki_TMTPro18x_K_F5 136.51 117.27 1361500 1227700 1343000 1438800 1126900 1380500 1383600 1412200 1529200 1782400 1662200 1422300 1818800 1486700 1503300 1983200 1512700 1638500 1259600 1125400 1363300 1435300 1195600 1401100 1385400 1450300 1556400 1770300 1704100 1463700 1835600 1557900 1537500 1964300 1448200 1559400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4312200000 19643 648 18386 37240;37241 29850;29851 29851 2 9606 Homo sapiens 0.13907563485258834 NILGGTVFR Unmodified 975.55016 0.55016488 3600;274 V9HW78;B2R5M8;A0A024R3Y6;O75874;Q6FIA4;Q6FI37;Q0QER2;C9J4N6;A0A0A0U6N4;Q53GL5;P48735;P48735-2;B4DSZ6 HEL-216;IDH1;IDH2 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP] cytoplasmic;Isocitrate dehydrogenase [NADP], mitochondrial no no 0 0 0 3.5 0.5 1 1 54.008 54.042 2 0.00097582 15801 20230619_1883_Aki_TMTPro18x_K_F4 120.12 78.14 658730 506990 533390 566330 568020 748580 655850 632900 790150 712610 789690 843750 818840 809470 798200 867180 938750 1017000 607920 464820 553170 569520 591100 740280 660250 656690 797050 720300 811970 849450 834750 838830 820170 878710 897380 964070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 523080000 19644 274;3600 18387 37242;37243 29852 29852 1 9606 Homo sapiens 0.06141180025713311 NILGGTVFREPIICK Unmodified 1715.9393 0.939261 3600 Q53GL5;P48735;P48735-2;B4DSZ6 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 0 1 4 0 1 58.802 58.805 3 6.8488E-06 17820 20230619_1883_Aki_TMTPro18x_K_F4 120.64 96.416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19645 3600 18388 37244 29853 29853 1 9606 Homo sapiens 0.1099289441383462 NILHQGQEAILQR Unmodified 1518.8267 0.82667409 1436 A0A384MTI8;Q96C86;A0A3B3ITF0 DCPS m7GpppX diphosphatase yes no 0 0 0 8 0 1 45.342 45.37 3 5.3926E-22 11633 20230619_1888_Aki_TMTPro18x_K_F8 196.5 172.24 123510 103380 109350 110940 107850 129670 133650 107570 145400 164310 145500 155220 164930 122320 129710 159820 156190 146420 114120 94713 112280 111690 112950 129230 133560 113000 147610 162730 150170 156770 165940 129320 134140 159170 149120 139250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 426410000 19646 1436 18389 37245 29854 29854 1 9606 Homo sapiens 0.08801381731996116 NILIDFTK Unmodified 962.54368 0.54368251 43;2017 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9;P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J4Q0;A0A994J428 DKFZp686M1669;HK2;HK1 Hexokinase;Hexokinase-2;Hexokinase-1 no no 0 0 0 1.5 0.5 2 2 61.863 61.868 2;3 0.00073313 19230 20230619_1880_Aki_TMTPro18x_K_F1 124.23 65.415 175770 138280 170580 193920 171950 208780 237670 233170 255020 213060 231150 240710 282630 230550 220640 275160 253850 270380 162450 127060 173960 191430 180380 210420 236290 235990 257730 217310 240570 242880 283830 240540 227590 275380 242680 256800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 299710000 19647 2017;43 18390 37246;37247;37248;37249 29855;29856 29855 2 9606 Homo sapiens 0.06091242074319325 NILLTNEQLESAR Unmodified 1499.7944 0.79437091 4537 Q9H9B4;D6RDG7;S4R2X2;D6RFI0;D6RAE9 SFXN1 Sideroflexin-1 yes no 0 0 0 4.5 0.5 2 2 52.265 52.314 2;3 3.0535999999999995E-21 15037 20230619_1883_Aki_TMTPro18x_K_F4 272.1 245.5 195450 156060 164760 216340 173330 214120 211340 202540 257950 245750 250390 240950 280470 226320 220830 284510 267070 272110 180460 143370 170410 213360 180700 216330 212270 208930 259850 245970 258440 244430 282420 237070 228510 284090 255120 258560 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 552680000 19648 4537 18391 37250;37251;37252;37253 29857;29858;29859 29857 3 9606 Homo sapiens 0.06446549538327417 NILTEIYR Unmodified 1020.5604 0.56039521 3946 Q15907 RAB11B Ras-related protein Rab-11B yes yes 0 0 0 8 0 1 56.175 56.232 2 0.0017655 16206 20230619_1888_Aki_TMTPro18x_K_F8 137.42 94.177 182950 154490 152250 179350 178790 199780 191280 187840 220940 185940 180760 176060 191050 168970 194050 207790 196830 197320 168960 141640 157780 179350 184070 200210 193000 192680 221750 187810 187810 179020 194870 176560 197500 207570 188300 187530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251960000 19649 3946 18392 37254 29860 29860 1 9606 Homo sapiens 0.05093742960275449 NILYLLHQR Unmodified 1168.6717 0.671677 2179 B0QYW5;F6RTR7;B4DP73;B4DU97;O43808 SLC25A17 Peroxisomal membrane protein PMP34 yes no 0 0 0 6 0 1 53.868 53.945 3 8.8763E-06 15608 20230619_1886_Aki_TMTPro18x_K_F6 141.52 87.766 18607 14612 21041 21241 20271 22462 20831 19472 25804 21338 21265 17842 23189 18346 23189 21649 21713 20344 17219 13432 21160 20915 21133 22547 21126 20155 25819 21376 22096 18303 23595 19092 23489 21636 20780 19341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40932000 19650 2179 18393 37255 29861 29861 1 9606 Homo sapiens 0.09408802388225013 NINDAWVCTNDMFR Oxidation (M) 1770.7454 0.74538858 418 A0A024R6Y2;P61970;A0A8V8TRD3 NUTF2 Nuclear transport factor 2 yes no 0 1 0 5.33 0.471 2 1 54.879 54.951 2;3 7.5956E-07 15980 20230619_1886_Aki_TMTPro18x_K_F6 125.47 122.71 47033 47279 48518 47098 54816 53265 55659 52253 53993 48832 55109 55555 50864 41925 59249 52981 52343 49555 43564 43263 49242 47699 56382 53418 56023 53372 55130 49734 56336 55639 52426 44274 59685 52898 50129 47114 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 250830000 19651 418 18394 37256;37257;37258 29862;29863 29863 264 2 9606 Homo sapiens -0.10915430084628497 NINDAWVCTNDMFR Unmodified 1754.7505 0.75047396 418 A0A024R6Y2;P61970;A0A8V8TRD3 NUTF2 Nuclear transport factor 2 yes no 0 0 0 6.67 0.471 1 2 61.138 61.183 2;3 6.502399999999999E-22 18288 20230619_1887_Aki_TMTPro18x_K_F7 234.17 216.31 291790 252400 331300 285460 241710 351720 303820 322220 378870 378940 316620 329610 367710 309030 338190 361950 373400 401990 270210 231330 331730 286620 260500 349800 305240 332580 379450 378480 330120 336010 372300 322420 346490 365050 357120 381290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1227200000 19652 418 18394 37259;37260;37261 29864;29865 29864 2 9606 Homo sapiens -0.09671126221996929 NINIGDLNIK Unmodified 1112.619 0.61897272 706 A0A024RC62;Q6PK37;H0YLI7;Q7Z6K5-2;A0A0A6YYH1;P59780 AP3S2;C15orf38-AP3S2 AP-3 complex subunit sigma-2 yes no 0 0 0 8 0 1 58.28 58.327 3 0.0061704 17132 20230619_1888_Aki_TMTPro18x_K_F8 71.03 52.894 35977 27697 32913 41202 28882 39030 38230 42911 48004 46980 44775 49225 50703 42983 46238 54277 47032 58017 33231 25470 33690 40450 30647 39687 38318 43672 48229 47324 46382 49653 51347 45149 47190 54545 45068 55025 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145820000 19653 706 18395 37262 29866 29866 1 9606 Homo sapiens 0.06716799534729034 NINIYTYDDMEVK Oxidation (M) 1632.7341 0.73413841 2878 E5RGX5;Q93045;B7Z4N6;Q93045-2;B7Z4K3;B7Z5W7 STMN2 Stathmin;Stathmin-2 yes no 0 1 0 4.33 0.471 2 1 54.548 54.581 2;3 1.2006E-05 16054 20230619_1883_Aki_TMTPro18x_K_F4 128.27 110 151550 133780 156990 172500 86290 113780 147830 132410 128470 165080 209410 168040 164700 164410 162550 177790 176530 198750 140250 122760 158070 170270 96921 119920 145020 135020 135150 165090 208810 170500 169530 170350 166200 179590 168920 188470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 635060000 19654 2878 18396 37263;37264;37265 29867;29868 29867 1707 2 9606 Homo sapiens -0.05691928907094734 NINIYTYDDMEVK Unmodified 1616.7392 0.73922379 2878 E5RGX5;Q93045;B7Z4N6;Q93045-2;B7Z4K3;B7Z5W7 STMN2 Stathmin;Stathmin-2 yes no 0 0 0 4.5 0.5 1 1 59.055 59.083 2 1.6752E-18 17517 20230619_1885_Aki_TMTPro18x_K_F5 195.25 146.81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19655 2878 18396 37266;37267 29869;29870 29870 2 9606 Homo sapiens -0.04447625044463166 NINLIVQK Unmodified 940.57057 0.57056597 1172;3819 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087X253;B4DWG4;B4E261;A0A087WZQ6;A0A087WU93;A0A087WYD1;Q10567-4;Q10567-3;Q10567-2;Q10567;C9J1E7 AP2B1;DKFZp781K0743;AP1B1 AP-2 complex subunit beta;AP complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 3 0 1 53.116 53.175 3 0.00069676 15571 20230619_1882_Aki_TMTPro18x_K_F3 126.28 97.129 169360 139050 148280 142860 144330 171790 160870 154370 203370 100450 95663 67917 86896 69495 127170 106420 96497 77347 156440 127360 152300 144440 150890 171140 162490 157480 200140 103640 102740 70674 90881 73595 126800 104790 92491 73843 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 229750000 19656 1172;3819 18397 37268 29871 29871 1 9606 Homo sapiens 0.09790350685523208 NINNAFGPGTANER Unmodified 1473.6961 0.69605384 2550 B4DND2;Q96H41;Q53H47-3;Q53H47;B9ZVV8 SETMAR Histone-lysine N-methyltransferase SETMAR;Histone-lysine N-methyltransferase;Transposon Hsmar1 transposase yes no 0 0 0 6 0 1 42.682 42.776 2 0.0096978 10671 20230619_1886_Aki_TMTPro18x_K_F6 72.652 54.341 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19657 2550 18398 37269 29872 29872 1 9606 Homo sapiens -0.021846339868716314 NIPEAHQDAFK Unmodified 1268.6149 0.61494998 2075 A8K5H7;Q96TA2-3;Q96TA2-2;Q96TA2;Q5T8D2;Q5T8D1;Q96I63;R4GNA5;Q9Y2Q2;Q9NQ51 YME1L1;FTSH ATP-dependent zinc metalloprotease YME1L1 yes no 0 0 0 4 0 1 41.859 41.902 3 0.00026513 10368 20230619_1883_Aki_TMTPro18x_K_F4 105.65 86.409 65226 49618 61269 58623 65459 73838 62565 66829 99830 66883 68715 68580 81819 59137 61200 75082 71448 61653 60256 45516 62610 58679 67683 73351 64396 68735 98268 67724 72502 69244 82057 62180 63233 74411 68194 58737 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64852000 19658 2075 18399 37270 29873 29873 1 9606 Homo sapiens -0.008612899589707013 NIPEDNADMAR Oxidation (M) 1260.5405 0.54046441 3534;2560 B4DP06;C9JLK0;V9HWH7;P31939;B2R7P8;P31939-2 ATIC;HEL-S-70p Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 1 0 1 0 1 35.023 35.023 2 0.0039631 7942 20230619_1880_Aki_TMTPro18x_K_F1 86.276 65.374 67219 47979 53756 59148 68213 66770 67085 63682 78885 74221 89655 79373 85687 72298 78497 81986 93243 89056 62003 44044 55966 58915 69660 66896 68064 65561 80098 74621 91228 80152 87238 75337 80778 82623 89042 84526 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169940000 19659 2560;3534 18400 37271 29874 29874 1555 1 9606 Homo sapiens -0.07938420832647353 NIPEDNADMAR Unmodified 1244.5455 0.54554978 3534;2560 B4DP06;C9JLK0;V9HWH7;P31939;B2R7P8;P31939-2 ATIC;HEL-S-70p Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 0 1.5 0.5 1 1 39.082 39.115 2 0.00020783 9660 20230619_1880_Aki_TMTPro18x_K_F1 152.69 140.41 102150 90444 102020 100680 102950 103330 112560 111310 111600 118980 143200 122130 125540 106050 141270 128210 129510 119720 94500 82875 103640 100930 107010 104530 112960 113370 114990 119890 144560 123400 129390 111080 142650 128060 123960 113840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 416620000 19660 2560;3534 18400 37272;37273 29875 29875 1 9606 Homo sapiens -0.06694116970038522 NIPEGSHQYELLK Unmodified 1526.7729 0.77290718 4158 Q9H8S9;Q7L9L4;Q7L9L4-2;D6RCK3;B3KSH6;Q4W5E0;Q9H8S9-2 MOB1A;MOB1B;MOBKL1A;MOB4A MOB kinase activator 1A;MOB kinase activator 1B yes no 0 0 0 5.5 0.5 1 1 47.494 47.573 3 9.5999E-16 12817 20230619_1886_Aki_TMTPro18x_K_F6 206.2 169.91 184990 150550 169920 171270 151220 196180 165240 171070 212420 227100 231040 258050 276230 231100 206350 306550 298480 319010 170930 138020 173600 171630 159280 195890 167350 177990 214610 227470 238240 259680 277240 243290 216700 307200 284830 302790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 268270000 19661 4158 18401 37274;37275 29876;29877 29877 2 9606 Homo sapiens 0.030591645096365028 NIPGITLLNVSK Unmodified 1267.75 0.7499869 3558 Q59GY2;P36578;B4DMJ6;H3BM89;B4DMJ2;Q53G74 RPL4 60S ribosomal protein L4 yes no 0 0 0 4 0 2 62.102 62.107 2 1.8045E-34 19198 20230619_1883_Aki_TMTPro18x_K_F4 237.8 175.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19662 3558 18402 37276;37277 29878;29879 29878 2 9606 Homo sapiens 0.1268219018279524 NIPGPHMVLVPK Oxidation (M) 1316.7275 0.72747731 2629;940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370;D7EZH4;B7ZAX9;B4DZC0;O60264 SMARCA1;SMARCA5 Probable global transcription activator SNF2L1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 no no 0 1 0 3 0 1 45.995 46.073 3 0.0012092 12331 20230619_1882_Aki_TMTPro18x_K_F3 82.171 64.01 447250 349220 407260 464030 457450 479850 487030 455620 509670 451250 498250 503820 488910 394530 524950 545950 480240 509450 413140 320700 418110 459270 471820 483490 490000 467230 517320 457920 511550 505580 500800 418570 530850 544100 460130 484160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 177450000 19663 940;2629 18403 37278 29880;29881 29880 532 2 9606 Homo sapiens 0.08178267513517312 NIPIPTLK Unmodified 894.55385 0.55385327 3518;4034 P28289;P28289-2;Q5HYL6;Q9NYL9;H0YKU1;H0YNJ8 TMOD1;DKFZp686E1899;TMOD3 Tropomodulin-1;Tropomodulin-3 no no 0 0 0 3 0 1 57.027 57.06 3 0.0026845 17189 20230619_1882_Aki_TMTPro18x_K_F3 101.54 69.607 38905 36168 37460 39599 36760 34521 39962 43496 45266 39589 41469 34105 45687 34575 34308 47429 35869 37794 35994 33131 38167 39670 38283 35529 40288 43703 45653 40053 42847 34945 45922 36340 35248 46878 34317 35992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40012000 19664 3518;4034 18404 37279 29882 29882 1 9606 Homo sapiens 0.10235849799573771 NIPIPTLR Unmodified 922.56 0.56000128 2139 A8K9L8;Q9NZR1;Q4G0W6;G5EA42 TMOD2 Tropomodulin-2 yes no 0 0 0 3.5 0.5 1 1 53.292 53.328 2 0.03816 15520 20230619_1883_Aki_TMTPro18x_K_F4 72.789 61.421 146960 130950 139320 141960 120500 151900 148110 156920 182270 138470 143510 133390 141620 128950 158630 148880 160650 164100 135910 119960 141920 142670 127610 152950 148820 159450 182050 140860 148970 135580 145490 134220 161060 150170 153710 155690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 62389000 19665 2139 18405 37280;37281 29883;29884 29884 2 9606 Homo sapiens 0.09562368031095048 NIPMTLELLQSTR Oxidation (M) 1530.8076 0.80757813 1319 P23193;A0A384MTX4;A0A1W2PPZ5;E5RIS7;E5RJ93 TCEA1 Transcription elongation factor A protein 1 yes no 0 1 0 2 0 1 61.167 61.178 3 3.1355E-08 19098 20230619_1881_Aki_TMTPro18x_K_F2 141.07 94.475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19666 1319 18406 37282 29885 29885 826 1 9606 Homo sapiens 0.06340664326057777 NIPPYFVALVPQEEELDDQK Unmodified 2343.1634 0.1634431 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 0 0 0 3.83 1.77 1 1 1 2 1 64.092 64.117 3;4 2.9894E-22 19959 20230619_1886_Aki_TMTPro18x_K_F6 170.61 154.21 294370 235000 266040 287360 275040 309000 314790 289980 316850 337440 351800 345120 373480 326750 363650 353840 353370 403370 271940 215610 272900 286190 286090 310400 315170 298920 324200 338720 360280 349390 380020 339150 369350 357960 338550 382420 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1160500000 19667 150 18407 37283;37284;37285;37286;37287;37288 29886;29887;29888;29889;29890 29890 5 9606 Homo sapiens 0.04558791467525225 NIPQGAPVK Unmodified 922.52362 0.52361577 87 Q2TB59;A0A024R0C3;Q13423;A0A590UJM2;A0A590UK29;E9PCX7;A0A590UK15;A0A590UJI3 NNT NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 8 0 1 42.762 42.765 3 0.046404 10650 20230619_1888_Aki_TMTPro18x_K_F8 48.423 23.501 37610 34850 37502 41905 44257 57774 45749 51435 71086 33555 34154 34885 37234 29239 39241 37882 37200 36898 34805 31952 38247 41942 45595 57039 46800 52480 69391 34989 36923 35186 38000 30813 39747 37880 35610 35057 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28841000 19668 87 18408 37289 29891 29891 1 9606 Homo sapiens 0.0592549113438281 NIPVYECER Unmodified 1178.539 0.53900784 3310 O75569-3;O75569-2;O75569;A0A7I2YQ87;A0A7I2V5H3;A0A7I2V2P4;F8WEG8;G5E9Q4;A0A7I2V5C2;A0A7I2V3L6;C9JMM3 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes no 0 0 0 3.5 0.5 1 1 42.908 42.963 2 0.00013083 10828 20230619_1883_Aki_TMTPro18x_K_F4 166.16 121.08 216810 169440 187790 194470 191890 208620 223640 226080 268500 231840 225270 236450 254000 212610 208810 263760 283840 242060 200200 155380 193290 194610 199940 210330 225010 229880 269230 234190 234460 239050 256260 222780 217550 262870 270560 230290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281270000 19669 3310 18409 37290;37291 29892;29893 29893 2 9606 Homo sapiens -0.04312010130752242 NIQDSVPK Unmodified 899.47125 0.47124585 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;O00429-7;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402 DNM1L Dynamin-1-like protein no no 0 0 0 5.5 0.5 1 1 42.73 42.818 2 0.0046931 10721 20230619_1886_Aki_TMTPro18x_K_F6 115.7 61.989 139020 97138 138030 176880 186950 197100 172590 174370 227710 164500 203820 205250 184340 173850 159440 140250 237790 225180 128430 89605 141260 172130 189950 197150 176510 179490 227660 168160 209350 205360 187770 178630 166760 146310 226670 213020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127380000 19670 3212;3213 18410 37292;37293 29894;29895 29895 2 9606 Homo sapiens 0.017489080007635494 NIQDTSDLDAIAK Unmodified 1402.694 0.69398816 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;Q9NZB2-5;Q9NZB2-2;A0A0C4DH52 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 0 0 4 0 1 53.208 53.227 3 0.036707 15460 20230619_1883_Aki_TMTPro18x_K_F4 55.98 33.505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19671 1839 18411 37294 29896 29896 1 9606 Homo sapiens 0.008748924846713635 NIQFAHANKPK Unmodified 1266.6833 0.68330431 618 A0A024RAC6;Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes no 0 0 1 4 0 1 38.959 39.002 4 0.001828 9128 20230619_1883_Aki_TMTPro18x_K_F4 93.258 71.026 76334 62355 65365 75277 90295 94352 96199 90495 117020 91011 92731 84119 92276 72954 81921 98622 88028 78139 70499 57197 67757 75205 91983 93886 97226 92720 117000 91799 96197 85388 93676 76978 83913 97507 84097 74470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126260000 19672 618 18412 37295 29897 29897 1 9606 Homo sapiens 0.060629994115288355 NIQFEAFHVFK Unmodified 1378.7034 0.70337105 287 Q9Y376;A0A024R496;Q7Z4X0 CAB39 Calcium-binding protein 39 yes no 0 0 0 3 0 1 59.167 59.197 3 1.7092E-06 18092 20230619_1882_Aki_TMTPro18x_K_F3 156.36 120.95 58052 53440 60454 63548 51587 63426 63979 56745 74045 73214 70349 62938 78493 65215 66643 75109 74707 76560 53740 48991 61106 63350 54669 63992 64100 58903 74733 72826 72652 64459 79283 67746 68467 75378 71414 72695 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33609000 19673 287 18413 37296 29898 29898 1 9606 Homo sapiens 0.02916750351482733 NIQVDEANLLTWQGLIVPDNPPYDK Unmodified 2851.4392 0.43922403 3099 I1SRC5;A0A8Q3WL22;A8K4W8;A0A024R1A4;P68036;P68036-3 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 0 0 7 0 1 65.252 65.279 3 8.7878E-09 20219 20230619_1887_Aki_TMTPro18x_K_F7 109.56 97.253 5483.1 2746.8 4736.5 4524.2 4695.2 4899.8 4241.6 4129.7 4357.3 4910.9 7492.7 6533 4824.8 4676.7 5508.4 5307.5 5675.6 6275.2 5052.1 2534.6 4870 4425.8 4867.7 4907.3 4311.8 4295.2 4553.4 4968.6 7416.7 6499 5043.2 4916.1 5598.1 5378.5 5432.9 5947.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29600000 19674 3099 18414 37297 29899 29899 1 9606 Homo sapiens 0.08756198524679348 NIQVSHQEFSK Unmodified 1315.6521 0.65206377 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B4DHD2;B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 7 0.816 1 1 1 41.404 41.458 3 5.2632E-05 9888 20230619_1887_Aki_TMTPro18x_K_F7 130.44 101.09 63701 47774 63418 61778 60443 69700 57562 65717 81405 79510 84263 82537 82656 69515 67789 92572 81550 81771 58870 43867 64383 61348 63013 69778 58994 67753 81702 79714 86207 83237 83708 73338 70093 91980 77895 77780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 247870000 19675 3981 18415 37298;37299;37300 29900 29900 1 9606 Homo sapiens 0.006863815867973244 NISELFYYAQK Unmodified 1374.682 0.68196691 1821 A0A8V8TM48;Q8IXI1;H3BST5;I3L2C6;H7BXZ6;Q8IXI1-2;Q8IXI2-6;Q8IXI2-4;Q8IXI2;Q8IXI2-5;Q8IXI2-2;Q8IXI2-7;Q8IXI2-3 RHOT2;RHOT1 Mitochondrial Rho GTPase 2;Mitochondrial Rho GTPase;Mitochondrial Rho GTPase 1 yes no 0 0 0 2.5 0.5 1 1 62.846 62.865 3 3.5179E-05 19887 20230619_1881_Aki_TMTPro18x_K_F2 135.8 110.94 110960 89334 103380 102260 79819 109620 104580 111450 116580 131650 126710 136010 144190 119100 129240 145420 142910 148220 102530 81907 105310 102350 85633 110300 104450 114250 118580 132050 130370 137270 145880 124830 132520 145820 136640 140730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147900000 19676 1821 18416 37301;37302 29901 29901 1 9606 Homo sapiens 0.009613205321329588 NISFNDK Unmodified 836.40283 0.40283194 3456;2184 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;J7M2B1;Q6PJT4;Q9UK20;Q9UJZ6;Q9UJZ8;Q9UJZ2;Q9UJU1;Q9UJZ7;P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;Q05CU6;Q6PKD3;V9HWC0;P26038;A0A8V8TKR9 EZR;HEL-S-105;EZR-ROS1;MSN;VIL2;RDX;HEL70 Ezrin;Tyrosine-protein kinase receptor;Radixin;Moesin no no 0 0 0 6.5 0.5 1 1 45.86 45.947 2 0.0073371 12088 20230619_1886_Aki_TMTPro18x_K_F6 133.68 53.451 387270 256470 356030 374090 461540 503360 411230 417200 638710 540820 584100 565350 658590 532330 405940 669520 742940 613270 357440 235950 365940 369620 470200 497110 424490 435330 635480 541130 604510 571970 657990 557490 437220 666660 706680 583560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 785730000 19677 3456;2184 18417 37303;37304 29902 29902 1 9606 Homo sapiens -0.021913365790851458 NISFNDKK Unmodified 964.49779 0.49779495 3456;2184 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;J7M2B1;Q6PJT4;Q9UK20;Q9UJZ6;Q9UJZ8;Q9UJZ2;Q9UJU1;Q9UJZ7;P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;Q05CU6;Q6PKD3;V9HWC0;P26038;A0A8V8TKR9 EZR;HEL-S-105;EZR-ROS1;MSN;VIL2;RDX;HEL70 Ezrin;Tyrosine-protein kinase receptor;Radixin;Moesin no no 0 0 1 1.5 0.5 1 1 43.36 43.401 3 0.048183 11406 20230619_1881_Aki_TMTPro18x_K_F2 57.267 36.938 260240 216530 308840 288490 423300 317430 390380 353780 358000 372770 410870 350360 384290 343370 437430 287760 476560 420120 241030 198810 311140 285900 428230 320000 394480 359440 368810 374980 417700 356440 395700 351700 445150 297990 455200 397830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274880000 19678 3456;2184 18418 37305;37306 29903 29903 1 9606 Homo sapiens 0.01412596892100737 NISFTVWDVGGQDK Unmodified 1564.7522 0.75217174 258 P84077;A0A024R3Q0;A0A8V8TQC0;A0A8V8TNZ5;P61204;A0A8V8TQP8;A0A024R0Y6;A0A8V8TNZ0;B4DN70;B4DEB9;B4DJC8;F5H423;A0A8V8TP92;F5H0C7;A0A8V8TP99 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 0 0 7.5 0.5 2 2 62.128 62.16 2;3 2.4292E-28 18780 20230619_1887_Aki_TMTPro18x_K_F7 289.31 235.55 1240400 938440 1160300 1119400 838780 1074400 1183400 1085800 1234400 1458400 1364000 1408700 1544800 1373400 1400100 1747800 1475800 1705900 1145800 860970 1180400 1115500 907150 1090000 1175200 1118900 1261000 1452200 1401800 1431400 1564400 1437400 1432500 1747000 1412900 1619900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1215200000 19679 258 18419 37307;37308;37309;37310 29904;29905 29904 2 9606 Homo sapiens -0.007614258700641585 NISHDTFGTTYGR Unmodified 1467.6743 0.67425577 2112 A8K800;Q9H7B2 RPF2 Ribosome production factor 2 homolog yes no 0 0 0 7 0 1 39.286 39.35 3 3.4412E-06 9000 20230619_1887_Aki_TMTPro18x_K_F7 132.31 124.59 17962 13460 20124 21942 25389 26220 23696 23063 26645 22423 23693 24333 24448 21331 20819 19597 27555 28107 16617 12393 20352 21501 25891 26109 24079 23765 26855 22765 24483 24502 24766 22023 21598 20202 26303 26604 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29183000 19680 2112 18420 37311 29906 29906 1 9606 Homo sapiens -0.040874387354506325 NISHVHTMDFSPR Oxidation (M) 1555.7202 0.72016011 2289 B2RAX6;Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 0 1 0 7 0 1 34.045 34.127 4 9.7032E-07 6997 20230619_1887_Aki_TMTPro18x_K_F7 143.94 121.05 13788 9347.8 12252 11792 16381 13926 13091 15811 14460 12873 17697 17389 15531 10868 12459 15874 17689 15765 12724 8584.9 12625 11742 16573 13973 13445 15934 14775 13295 17902 17237 15761 11697 13030 15854 16860 14982 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13383000 19681 2289 18421 37312 29907 29907 1417 1 9606 Homo sapiens -0.035471168248477625 NISMSVEGDYTYLR Oxidation (M) 1662.7559 0.75593649 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 1 0 5 0 1 52.225 52.299 2 8.654E-07 14732 20230619_1885_Aki_TMTPro18x_K_F5 139.32 116.54 31914 27696 27860 32860 34306 30174 32269 33489 32552 37204 40259 42886 42646 35426 30081 43919 41809 45290 29491 25395 28754 32730 35013 30820 32677 34088 33483 37553 41050 43025 42852 37240 31535 44032 39913 42989 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49384000 19682 4746 18422 37313 29908 29908 2892 1 9606 Homo sapiens -0.048931241584796226 NISMSVEGDYTYLR Unmodified 1646.761 0.76102187 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 6 0 1 56.558 56.632 2 1.0165E-36 16695 20230619_1886_Aki_TMTPro18x_K_F6 333.77 298.06 46909 40891 41971 39310 37442 46738 47393 39783 41125 56358 53953 48699 59460 49419 47805 61484 54959 58562 43356 37425 42972 39960 39547 46556 47021 41578 42833 55821 54955 49832 59945 51604 49289 61388 52540 55641 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29830000 19683 4746 18422 37314 29909 29909 1 9606 Homo sapiens -0.036488202958707916 NISSAQIVGPGPKPEASAK Unmodified 1849.9898 0.98977625 2078 P53990-4;P53990;P53990-2;A8K5S3;P53990-5;B4DLP1;B4DXC9;P53990-6 IST1 IST1 homolog yes no 0 0 1 1.5 0.5 1 1 46.739 46.779 4 7.2442E-10 12971 20230619_1881_Aki_TMTPro18x_K_F2 127.5 111.73 77163 62351 74103 83303 77228 93459 87218 78548 95168 99427 105770 110400 107250 94427 90810 115390 121650 117420 71321 57256 75648 82504 80308 93365 87602 81873 96948 99707 108100 111030 108680 99020 94466 115660 116070 111520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 713360000 19684 2078 18423 37315;37316 29910 29910 1 9606 Homo sapiens 0.09878095272506471 NITEYCR Unmodified 954.42292 0.42291545 635 A0A024RAV2;P46063 RECQL ATP-dependent DNA helicase Q1 yes no 0 0 0 4.5 0.5 1 1 37.859 37.927 2 0.034558 8675 20230619_1885_Aki_TMTPro18x_K_F5 93.195 44.692 113210 72212 102830 114630 136380 143240 138370 148750 171700 124930 144030 161860 156430 131250 109250 154100 195690 174750 104460 66514 105900 112600 139060 142740 140400 150900 171780 128720 149670 161610 157120 137610 116930 155500 186250 165840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171650000 19685 635 18424 37317;37318 29911 29911 1 9606 Homo sapiens -0.05611908910782404 NITLDDASAPR Unmodified 1171.5833 0.5833155 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;A0A8I5QJA6;E9PLT0;E9PNG3;Q9UG93;Q8WU01 CSDE1;DKFZp586J0620 Cold shock domain-containing protein E1 yes no 0 0 0 3.5 0.5 1 1 43.828 43.885 2 5.2574E-23 11289 20230619_1882_Aki_TMTPro18x_K_F3 255.19 214.16 293160 223640 256530 274350 267610 302040 302900 299230 360200 382390 368100 328300 407890 338090 285220 390060 408590 324310 270680 205230 263930 273290 278250 303270 305140 308050 364240 380390 378600 336190 409250 351170 299540 387200 389160 309040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 622780000 19686 88 18425 37319;37320 29912;29913 29912 2 9606 Homo sapiens 0.0043871728707927105 NITLNFGPQHPAAHGVLR Unmodified 1941.0333 0.033312819 1669 O75306;A0A7I2V4X8;B7Z792;O75306-2;A0A7I2YQG7;A0A7I2V596;Q53HG2;A0A7I2V4G5;A0A7I2YQD8;A0A7I2V3J6;A0A7I2V2B9;A0A7I2V4W5;A0A7I2V410;A0A7I2V630;A0A7I2V5G4;A0A7I2V5E2;A0A7I2V5D5;A0A7I2V517 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 4.5 0.5 1 1 45.89 45.95 4 4.2417E-14 12051 20230619_1885_Aki_TMTPro18x_K_F5 165.02 143.79 249860 264210 282540 304570 289040 340140 323460 266850 367260 311890 309050 322180 371710 292150 351880 368480 349240 347350 231720 242040 284580 304710 300730 339610 325350 279130 369290 313350 322720 325620 376290 306470 358100 367860 334160 330150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 992910000 19687 1669 18426 37321;37322 29914;29915;29916 29916 3 9606 Homo sapiens 0.10043749560304605 NITRPFEDQTSLEFFSK Unmodified 2058.0058 0.0058202445 2112 A8K800;Q9H7B2;Q5VXN0 RPF2 Ribosome production factor 2 homolog yes no 0 0 1 8 0 1 60.631 60.663 4 0.00013707 18058 20230619_1888_Aki_TMTPro18x_K_F8 93.765 68.047 26089 13520 20563 31459 18401 27945 28466 26642 31791 30739 25162 30495 25646 23776 24551 30472 28579 36826 24026 12541 21396 30197 19629 28442 28206 27436 31940 30838 26190 30713 26130 25106 25243 30847 27363 34880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62249000 19688 2112 18427 37323 29917 29917 1 9606 Homo sapiens 0.01913756718749937 NITVREEEK Unmodified 1116.5775 0.57750184 3312 O75643;A4FU77;A0A494C1A5 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 1 3.5 0.5 1 1 36.567 36.617 3 0.002824 8218 20230619_1882_Aki_TMTPro18x_K_F3 89.913 42.059 74851 49678 60291 74021 76632 75286 72499 92725 108360 79314 87492 108900 109120 99232 61544 104220 157930 133160 69020 45714 62770 72749 78228 76420 74467 93115 107460 81812 91761 108850 108590 102940 68952 106140 150010 126260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62573000 19689 3312 18428 37324;37325 29918 29918 1 9606 Homo sapiens 0.023876187754240163 NITYEELR Unmodified 1036.5189 0.51892433 593 A0A024R9U3;Q9NX40;D6RDK6;D6RBN5 OCIAD1 OCIA domain-containing protein 1 yes no 0 0 0 3.5 0.5 1 1 44.796 44.855 2 0.0010715 11760 20230619_1882_Aki_TMTPro18x_K_F3 149.65 55.246 251320 197350 234970 272230 266500 322640 326800 322900 380970 287750 336320 349250 303030 280600 357060 328110 373950 382280 232210 181300 240850 269330 276230 322260 327560 328920 382830 294690 345930 349480 313110 294160 362910 332090 357690 362490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 411180000 19690 593 18429 37326;37327 29919 29919 1 9606 Homo sapiens 0.002125622009543804 NITYLPAGQSVLLQLPQ Unmodified 1854.0251 0.025099124 2035 Q6FHP5;A8K401;P35232;Q6PUJ7;Q53FV0;C9JZ20 PHB;HEL-S-54e Prohibitin yes no 0 0 0 2.5 0.5 1 1 65.362 65.382 3 1.1202E-13 20675 20230619_1882_Aki_TMTPro18x_K_F3 159.69 143.43 45725 44554 48725 54796 48857 64465 65920 65834 71812 67832 68414 69495 77083 65657 72954 73793 69932 75992 42354 40852 49314 54623 51262 64452 65645 67203 72683 68504 70752 70350 78193 68290 74096 74152 66982 72132 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2187600000 19691 2035 18430 37328;37329 29920;29921 29921 2 9606 Homo sapiens 0.13224757800344378 NIVDHTNEQQK Unmodified 1324.6371 0.63714198 3232 O15066;O15066-2 KIF3B Kinesin-like protein KIF3B;Kinesin-like protein KIF3B, N-terminally processed yes no 0 0 0 3 0 1 34.373 34.434 3 0.0083583 7342 20230619_1882_Aki_TMTPro18x_K_F3 75.819 56.242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19692 3232 18431 37330 29922 29922 1 9606 Homo sapiens -0.01219110281203939 NIVEAAAVR Unmodified 941.52943 0.52942943 643 A0A024RB14;P62854;Q5JNZ5;Q75MH1;Q76N57 RPS26;RPS26P11 40S ribosomal protein S26;Putative 40S ribosomal protein S26-like 1 yes no 0 0 0 5.5 1.12 1 1 1 1 42.853 42.927 2 0.00064766 10700 20230619_1886_Aki_TMTPro18x_K_F6 128.36 74.204 971470 819550 840740 890520 921580 1078900 1000400 1030400 1065800 819120 733560 685430 936060 734230 779120 944280 877760 770260 897460 750930 866550 896310 953730 1075600 1006000 1050100 1068600 835620 776880 704330 941310 767050 801320 935380 838140 733840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3341099999.9999995 19693 643 18432 37331;37332;37333;37334 29923;29924;29925 29924 3 9606 Homo sapiens 0.05632589646040742 NIVLSGGSTMFR Unmodified 1280.6547 0.6547063 622 P61158;A0A024RAI1;Q59FV6;B4DXW1;B4DT29;B4DTI0;B4E1U3 ACTR3 Actin-related protein 3 yes no 0 0 0 4 0 1 54.63 54.645 2 3.8358E-09 16068 20230619_1883_Aki_TMTPro18x_K_F4 214.08 186.33 113140 107040 121250 123140 108760 134160 119200 115210 133390 133080 113440 106350 132090 99071 132200 145030 127560 125480 104780 98093 122330 123200 114330 134390 120060 119500 134380 132750 118140 108980 134140 104930 134250 143870 122080 119400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207720000 19694 622 18433 37335 29926 29926 1 9606 Homo sapiens 0.025605137201182515 NIVPGWLQR Unmodified 1081.6033 0.60326308 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 4.67 0.471 1 2 56.371 56.406 2 0.00065097 16440 20230619_1885_Aki_TMTPro18x_K_F5 107.9 75.425 91117 80589 85569 95667 90595 112840 94472 102240 122190 106940 95457 98290 114040 100670 107560 119610 124480 104480 84253 73889 87536 95595 93970 112530 95896 105270 121860 107620 100040 100270 115560 104730 110480 119030 118800 99468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107710000 19695 68 18434 37336;37337;37338 29927;29928 29928 2 9606 Homo sapiens 0.06572557808362944 NIVQEDHPIMSFTISK Unmodified 1857.9295 0.92948418 1557 A0A7I2YQL3;A0A7P0SXD0;A0A7I2YQQ9;A0A499FIZ0;Q9H7D7-2;Q9H7D7;H0Y9R3;B4DRF0 WDR26 WD repeat-containing protein 26 yes no 0 0 0 8 0 1 56.806 56.862 3 0.00046271 16541 20230619_1888_Aki_TMTPro18x_K_F8 79.837 69.498 35830 26303 32640 34512 32559 34481 37455 31445 34705 38244 38639 39501 36900 32577 39691 42296 43128 40924 33085 24158 33432 34174 33938 34805 37394 32542 35687 38317 39404 39808 37860 34338 40515 42264 41216 38892 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12166000 19696 1557 18435 37339 29929 29929 1 9606 Homo sapiens 0.0348366161776994 NIVSAFGIIPR Unmodified 1185.687 0.68699271 2443 B3KY42;Q96PZ0;Q96PZ0-2;B3KRB2 PUS7 Pseudouridylate synthase 7 homolog yes no 0 0 0 6 0 1 62.184 62.235 3 0.0015199 19098 20230619_1886_Aki_TMTPro18x_K_F6 97.163 66.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19697 2443 18436 37340 29930 29930 1 9606 Homo sapiens 0.10157669185423401 NIVSDCSAFVK Unmodified 1238.5965 0.59652272 2140 B7Z3Z9;E7EPM6;P33121;P33121-2;A8K9T3;B4E0R0;P33121-3;H0Y9Z9;A0A994J7S4;D6RER0;Q108N2;Q108N1 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes no 0 0 0 8 0 1 52.365 52.442 2 0.026637 14587 20230619_1888_Aki_TMTPro18x_K_F8 78.934 61.203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19698 2140 18437 37341 29931 29931 1 9606 Homo sapiens -0.013231679251930473 NIWIPMK Unmodified 900.48914 0.48914452 966 A0A0A0MTQ5;G3V556;P56378;A0A024R6N3;P56378-2 C14orf2;MP68 6.8 kDa mitochondrial proteolipid yes no 0 0 0 4 0 1 60.129 60.131 2 0.0077463 18381 20230619_1883_Aki_TMTPro18x_K_F4 122.78 69.609 102880 85891 94687 105840 71585 119560 115090 122720 149510 125440 108070 142190 151890 133890 121230 176690 191380 208780 95084 78796 96658 105430 77741 119820 114560 125190 148690 127190 114970 143280 152330 140680 127990 178460 182550 197890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106770000 19699 966 18438 37342 29932 29932 1 9606 Homo sapiens 0.034919517219236695 NIYSEELR Unmodified 1022.5033 0.50327426 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 3 0.816 1 1 1 43.401 43.466 2 0.0013444 11401 20230619_1881_Aki_TMTPro18x_K_F2 144.12 88.111 724710 526640 605270 791100 850170 1063000 1022700 1002100 1684600 943950 978460 1122800 1144500 922820 915220 1080500 1113900 1156500 668740 484470 630040 780110 870830 1052100 1040200 1026200 1648100 964240 1044900 1124700 1152100 967070 946550 1087100 1064200 1097500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2810000000 19700 1428 18439 37343;37344;37345 29933;29934 29933 2 9606 Homo sapiens -0.007077243161006663 NIYSEELRETK Unmodified 1380.6885 0.68850885 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 1 4 0.816 1 1 1 44.224 44.289 3 2.0944E-06 11403 20230619_1883_Aki_TMTPro18x_K_F4 148.62 123.92 431510 561640 471880 432090 756370 476340 664290 706370 514110 539010 519920 405460 507040 344170 605360 587810 581500 434210 400780 512620 479680 448670 757140 485110 670530 700760 533030 549060 532270 416430 521980 370220 612380 578240 555590 414580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 321830000 19701 1428 18440 37346;37347;37348 29935 29935 1 9606 Homo sapiens 0.013392136928359832 NIYVLQELDNPGAK Unmodified 1572.8148 0.814772 150 A0A024R1N4;P12956;B1AHC9;B2RDN9;B4DE32 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 6.5 0.5 2 2 61.209 61.256 2;3 3.4187999999999998E-46 18662 20230619_1886_Aki_TMTPro18x_K_F6 370.17 319.7 527580 435190 476010 523660 487260 538400 518890 549820 625030 679060 658130 617720 687930 628310 650150 717710 633920 730360 487470 399160 488270 521830 506360 543660 524830 564230 632490 677480 674740 630390 699580 652440 661300 720350 607350 693210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5994399999.999999 19702 150 18441 37349;37350;37351;37352 29936;29937 29936 2 9606 Homo sapiens 0.05127720198129282 NIYYLCAPNR Unmodified 1282.6128 0.61284149 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3;Q5CAQ4;I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 3 0 1 49.577 49.655 2 9.9713E-05 13955 20230619_1882_Aki_TMTPro18x_K_F3 168.23 151.29 98945 112270 72741 69881 169230 326250 123090 125830 329510 18494 12748 23990 23130 19375 27599 22601 27055 28252 91512 102380 77696 77346 168560 305530 132750 139310 310370 25518 28445 24008 23666 20315 27926 22991 25900 26770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153170000 19703 1211 18442 37353 29938 29938 1 9606 Homo sapiens -0.017160419684159933 NKEDQYDHLDAADMTK Unmodified 1892.8211 0.82105594 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8;B0AZS1;B0AZT0 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 0 1 4 0.816 1 1 1 44.662 44.727 4 4.522E-08 11708 20230619_1882_Aki_TMTPro18x_K_F3 137.45 115.02 271090 200950 223280 269300 220420 277080 236540 235590 324570 388980 373040 390930 447580 377420 305680 431100 421710 412650 250150 184600 231040 266310 230180 278560 240350 247690 328010 384980 383630 396190 447740 392600 320420 430980 402310 392160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 742800000 19704 3544 18443 37354;37355;37356 29939 29939 1 9606 Homo sapiens -0.0896417442334041 NKEDQYDHLDAADMTK Oxidation (M) 1908.816 0.81597056 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8;B0AZS1;B0AZT0 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 1 1 3 0.816 1 1 1 40.711 40.769 4 1.4262E-07 9881 20230619_1883_Aki_TMTPro18x_K_F4 132.59 117 196220 147820 188500 208610 204950 196470 187450 180630 228350 274770 318760 267020 273060 227910 223940 304770 257160 245900 181290 135860 192430 205440 210960 199300 191400 188210 234040 272350 320330 270300 277720 240380 230880 301520 245650 234220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 347370000 19705 3544 18443 37357;37358;37359 29940;29941 29940 2208 2 9606 Homo sapiens -0.1020847828594924 NKEEAAEYAK Unmodified 1151.5459 0.54586736 1910 Q96DV6;A2A3R6;P62753;A2A3R5 RPS6 40S ribosomal protein S6 yes no 0 0 1 4.5 0.5 1 1 39.627 39.693 3 0.0027056 9365 20230619_1885_Aki_TMTPro18x_K_F5 85.522 62.988 128140 67885 154180 163020 215220 235030 182430 210130 172920 126640 200060 212290 219810 201700 172720 82334 257160 190990 118430 63002 155430 157540 217690 231390 185660 214070 177610 135140 204910 211110 221610 202140 180560 91102 244780 180490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 686500000 19706 1910 18444 37360;37361 29942 29942 1 9606 Homo sapiens -0.02384373978543408 NKFEEAER Unmodified 1021.4829 0.48287317 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;A0A0S2Z4D8;A0A0S2Z4W7;A0A0C4DGP4 PRKCSH Glucosidase 2 subunit beta yes no 0 0 1 2.5 0.5 1 1 36.116 36.173 3 0.056525 8007 20230619_1882_Aki_TMTPro18x_K_F3 57.204 29.65 222930 165350 214420 216940 306000 289180 289440 290230 341390 264330 330950 287940 302580 259680 309300 198590 307450 227400 205950 151860 219890 215810 309830 287030 294330 295630 344110 269390 338550 290270 310000 265590 313630 202620 293630 215980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 975650000 19707 444 18445 37362;37363 29943 29943 1 9606 Homo sapiens -0.02700894975907886 NKHEAMITDLEER Oxidation (M) 1600.7515 0.75151981 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5;Q99529 MYH9 Myosin-9 yes no 0 1 1 2.5 0.5 1 1 36.745 36.802 4 0.00044193 8300 20230619_1882_Aki_TMTPro18x_K_F3 103.14 91.16 20958 10364 19569 22155 24324 20172 22928 21210 28142 27324 27900 24443 27077 19443 25002 24557 25644 23899 19320 9601.8 20073 21358 24809 20572 23356 21767 28371 27199 28575 24777 27536 20511 25493 24562 24518 22712 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90208000 19708 148 18446 37364;37365 29944 29944 74 1 9606 Homo sapiens -0.024825885813925197 NKKDELQSER Unmodified 1245.6313 0.63132832 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 2 5.5 0.5 1 1 34.326 34.393 4 0.068106 7409 20230619_1886_Aki_TMTPro18x_K_F6 50.207 39.722 73690 47752 131200 106810 178580 127650 131100 147530 78418 68226 152790 78327 59236 45712 172670 21755 53115 27821 68491 44212 128960 103260 179610 128000 133500 147160 85645 73392 148880 78202 68582 46978 166150 23105 51800 26453 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71758000 19709 4191 18447 37366;37367 29945 29945 1 9606 Homo sapiens 0.01833791207127433 NKPEWFFK Unmodified 1094.5549 0.5549159 2269 V9HWG9;B2R983;P78417;Q5TA02;P78417-3;P78417-2;Q5TA01 HEL-S-21;GSTO1 Glutathione S-transferase omega-1 yes no 0 0 1 3 0 1 54.551 54.597 3 0.0070256 16192 20230619_1882_Aki_TMTPro18x_K_F3 89.543 59.854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19710 2269 18448 37368 29946 29946 1 9606 Homo sapiens 0.01142064168448087 NKPGEIAK Unmodified 855.48142 0.48141661 1689 Q99986;A0A7P0TA65;A0A7P0T824;A0A7P0TA16;H0YJF7;A0A7P0TBE4;A8K245;A0A7P0T9E5;A0A7P0T838;A0A7P0TB15;A0A7P0T9T1;A0A7P0T952;A0A7P0T977;A0A7P0TAS8;A0A7P0T9I1;A0A7P0TBB8;A0A7P0T8N0;A0A7P0Z445;H0YJJ9;A0A7P0TAA6;A0A7P0T925;A0A7P0Z3Z7;A0A7P0Z462;H0YJ50 VRK1 Serine/threonine-protein kinase VRK1 yes no 0 0 1 8 0 1 37.804 37.789 3 0.066485 8586 20230619_1888_Aki_TMTPro18x_K_F8 53.517 34.902 40633 24034 46127 47070 56580 63283 45609 54931 62155 38448 53375 54396 43962 43407 57281 22551 60171 49919 37549 22213 46557 45809 57672 62518 47164 56229 61939 40268 54792 54081 45846 44041 57969 24650 57472 47161 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30125000 19711 1689 18449 37369 29947 29947 1 9606 Homo sapiens 0.047895157259858934 NKPHTPFR Unmodified 995.5301 0.53009814 1621 B0AZS5;A0A6Q8PFA6;A0A6Q8PH57;O00139-2;A0A6Q8PGH7;A0A6Q8PG37;B4DM85;O00139-1;O00139-5;O00139;O00139-4;A0A6Q8PGG1 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 1 3.5 0.5 1 1 32.609 32.673 4 0.0055823 6640 20230619_1883_Aki_TMTPro18x_K_F4 105.57 86.47 41938 37243 46740 41041 39672 40540 40785 41660 54163 43290 46212 38218 38932 34607 45157 47086 41442 35703 38836 34123 46929 41163 41781 41083 41495 42527 54064 43532 47424 38950 40271 36456 45616 46480 39647 34053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86805000 19712 1621 18450 37370;37371 29948 29948 1 9606 Homo sapiens 0.03215429085753385 NKPILHTDLDVK Unmodified 1391.7773 0.77726428 1957 A5YKK6;A5YKK6-2;A5YKK6-3;A5YKK6-4 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 1 8 0 1 45.417 45.445 4 0.0003556 11676 20230619_1888_Aki_TMTPro18x_K_F8 105 77.26 115220 75263 123300 118570 141360 114300 147160 126380 133060 133750 149020 111740 126090 97461 138810 111080 108460 111320 106470 69310 124780 116120 145130 116250 147590 128530 136990 134080 150940 114040 129890 101800 139100 111520 104090 105710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 249410000 19713 1957 18451 37372 29949 29949 1 9606 Homo sapiens 0.09704673723149426 NKPLFFADK Unmodified 1078.5811 0.58113065 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 1 2.5 0.5 1 1 51.696 51.748 3 0.0010015 14893 20230619_1882_Aki_TMTPro18x_K_F3 104.79 62.794 3210100 3282400 2960100 3042800 4474400 5851200 3710800 3758300 5364000 560770 586250 389200 425250 372590 2062400 504200 601790 301190 2971000 3001800 3052200 3129700 4518500 5653900 3832500 3897100 5165500 744330 821130 406020 518260 391610 1979000 498300 587830 289330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1042499999.9999999 19714 1062;1064 18452 37373;37374 29950;29951 29951 2 9606 Homo sapiens 0.04498333339938654 NKPQVPVPGSDISETQVER Unmodified 2079.0596 0.059646729 4327 Q96BK5 PINX1 PIN2/TERF1-interacting telomerase inhibitor 1 yes yes 0 0 1 5.5 0.5 1 1 46.589 46.669 3 2.2505E-14 12405 20230619_1886_Aki_TMTPro18x_K_F6 150.61 133.33 69901 55132 59757 67144 54672 62200 64977 50493 68051 76508 73835 63976 86997 69433 61286 93801 82130 80538 64543 50583 61515 66746 57502 63020 65001 53153 69444 75570 75965 65768 87135 72748 64102 93027 78369 76642 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 110520000 19715 4327 18453 37375;37376 29952;29953 29953 2 9606 Homo sapiens 0.06327929150484124 NKPSDLGTK Unmodified 958.50836 0.50835964 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;F5H783 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 1 8 0 1 38.324 38.309 3 0.0055423 8784 20230619_1888_Aki_TMTPro18x_K_F8 77.062 45.989 128710 59661 186090 165820 248660 220020 181720 228120 170100 123550 245540 272990 167410 206820 247340 68314 237340 205040 119130 55584 184990 159310 250890 218440 187020 229590 176620 134960 245300 267850 177500 207980 248530 79187 226960 193420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141840000 19716 2088 18454 37377 29954 29954 1 9606 Homo sapiens 0.02744579546526893 NKQPTPVNIR Unmodified 1165.6568 0.65675521 4732 X6R700;Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3;A0A087X1B7 CHTOP Chromatin target of PRMT1 protein yes no 0 0 1 3.5 0.5 1 1 36.259 36.309 3 0.017987 8083 20230619_1882_Aki_TMTPro18x_K_F3 66.486 46.699 210300 191640 200850 199950 260910 226770 239160 242080 246730 177420 188670 121910 144040 105890 222790 111800 125860 65587 194520 175490 205640 201750 265180 227860 242620 244460 248420 181150 194080 125920 151950 110120 219170 110080 120950 63005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197640000 19717 4732 18455 37378;37379 29955 29955 1 9606 Homo sapiens 0.08055310520217063 NKRDEHLLK Unmodified 1151.6411 0.64110515 3093;779 H7C4F6;O00629;A0A7I2YQ95;A0A7I2V340;A0A7I2V333;A0A024RDV7;O00505;Q53F09 KPNA4;KPNA3 Importin subunit alpha-3;Importin subunit alpha;Importin subunit alpha-4 no no 0 0 2 8 0 1 34.016 34.012 4 0.0082948 7109 20230619_1888_Aki_TMTPro18x_K_F8 73.067 22.158 40842 39998 43794 41140 56024 42748 41972 47729 54724 31515 35330 24576 26531 20653 40207 25427 33153 23857 37835 36613 44376 41515 56711 43290 43545 47964 54190 32539 36726 25177 27997 21701 40170 25437 31724 22711 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15038000 19718 3093;779 18456 37380 29956 29956 1 9606 Homo sapiens 0.07135024003173385 NKTEYEEAQDAIVK Unmodified 1636.7944 0.79443049 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;B4DN49;B4DL39;B4DSB9 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 1 5 0 1 47.141 47.217 3 5.6749E-05 12581 20230619_1885_Aki_TMTPro18x_K_F5 103.39 79.556 38230 29275 37691 38551 33733 33929 37292 35350 38466 48740 51046 48127 47781 36761 40693 48053 45245 41287 35332 26884 38270 38113 35417 34705 37455 36389 39661 48492 51610 48498 48499 38899 41796 47712 43218 39301 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30979000 19719 3585 18457 37381 29957 29957 1 9606 Homo sapiens 0.0015050474764848332 NKYEDEINKR Unmodified 1307.647 0.64697839 2778;2803 H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2;H6VRF9;CON__H-INV:HIT000016045;F8VP67;CON__Q922U2;CON__Q5XQN5;B4E1T1;CON__P13647;P13647;B4DL32 KRT1;KRT8;KRT5 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 5 no no 0 0 2 5 0.816 1 1 1 37.983 38.053 4 0.000882 8728 20230619_1886_Aki_TMTPro18x_K_F6 102.05 69.985 + 43227 73474 72682 0 6165200 234160 1559900 207270 521250 21891 73579 31601 70910 1150400 138800 30123 94326 79033 40465 66602 154000 0 5743200 237140 1801200 212210 578060 35192 97381 69695 83269 1085600 136870 52302 90574 74604 2 2 2 0 2 2 2 2 2 2 2 2 2 2 2 2 2 2 562660000 19720 2778;2803 18458 37382;37383;37384 29958;29959 29959 2 9606 Homo sapiens 0.005460777241751202 NLAANDLSPSR Unmodified 1156.5836 0.58364985 2122 B3KUM0;A8K8I8;Q96CB9-4;Q96CB9 NSUN4 5-methylcytosine rRNA methyltransferase NSUN4 yes no 0 0 0 5.5 0.5 1 1 41.114 41.205 2 0.00045989 9998 20230619_1885_Aki_TMTPro18x_K_F5 117.25 93.931 48651 41124 57301 62983 63548 71229 67112 78872 84894 63515 82720 83136 78762 74152 74452 76992 101230 87601 45062 37817 57625 61898 65617 71535 68038 79604 85289 65635 84798 83237 80388 76904 77266 77920 96500 83141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83398000 19721 2122 18459 37385;37386 29960 29960 1 9606 Homo sapiens 0.011621370069178738 NLACEESK Unmodified 949.4175 0.41749572 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 3 0 1 38.683 38.737 2 0.0031919 9072 20230619_1882_Aki_TMTPro18x_K_F3 120.12 36.854 19952 8344.6 19943 19539 22895 22942 22313 26208 23890 20106 24141 29562 23203 20545 22997 12609 32650 24955 18393 7752.5 20299 18844 23512 22997 22595 26374 24246 20924 24757 29232 23716 21079 23857 13527 31093 23599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11169000 19722 128 18460 37387 29961 29961 1 9606 Homo sapiens -0.05923632493261266 NLAEALLTYETLDAK Unmodified 1663.8669 0.86686715 2075 A8K5H7;Q96TA2-3;Q96TA2-2;Q96TA2 YME1L1 ATP-dependent zinc metalloprotease YME1L1 yes no 0 0 0 6 0 1 64.575 64.619 3 1.1608E-07 20185 20230619_1886_Aki_TMTPro18x_K_F6 127.88 111.63 95136 73928 89496 113070 78592 112930 96532 94265 117580 119500 129970 101180 139970 117870 109200 156760 125140 118790 87899 68004 91391 110870 83229 113670 96967 98299 119090 118920 132960 104310 141070 123060 112730 154650 119530 113260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 698890000 19723 2075 18461 37388 29962 29962 1 9606 Homo sapiens 0.061488388212183054 NLAIPVINK Unmodified 980.60187 0.6018661 2366 B3KNU0;P52306-4;P52306;P52306-5;B7Z4M5;P52306-6;P52306-2;P52306-3;B7Z2V8;Q6U7G8;H0Y8M2 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes no 0 0 0 4 0 1 56.806 56.812 3 0.035158 16966 20230619_1883_Aki_TMTPro18x_K_F4 54.982 27.239 47269 43598 42521 47265 45082 56899 51768 48016 53655 57606 55388 62696 58570 53329 51052 64536 61625 59199 43707 39934 43669 47563 46865 56600 51862 49934 54658 57858 56936 63074 59353 55881 52703 64340 58843 56293 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18185000 19724 2366 18462 37389 29963 29963 1 9606 Homo sapiens 0.11078923719594513 NLALCPANHAPLQEAAVIPR Unmodified 2154.1368 0.13679161 173 A0A0S2Z487;A0A024R1X8;P14923;A0A0S2Z495 JUP Junction plakoglobin yes no 0 0 0 1 0 1 52.076 52.076 3 6.904100000000001E-45 15188 20230619_1880_Aki_TMTPro18x_K_F1 248.91 238.28 54494 44934 50001 56824 65073 58657 64440 64781 68827 67166 52001 45917 72965 56174 50598 67291 66945 59438 50357 41235 51422 56435 66283 59350 65128 65803 69274 67117 55007 47957 72723 58237 52833 66957 63842 56565 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 340400000 19725 173 18463 37390 29964 29964 1 9606 Homo sapiens 0.10588868885815828 NLAMEATYINHNFSQQCLR Unmodified 2309.0681 0.0681197 3242 O15371-2;O15371-3;O15371;B4E1K8 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 0 2 0 1 55.031 55.052 3 1.8156E-39 16614 20230619_1881_Aki_TMTPro18x_K_F2 253.48 227.89 24178 19666 22317 24314 24000 21662 23101 23017 22445 27197 24899 30620 31975 25531 30399 28579 28423 38747 22341 18044 22854 24141 24732 22155 23336 23542 23042 27351 25789 30730 32318 26689 30823 29242 27285 36656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103910000 19726 3242 18464 37391 29965 29965 1 9606 Homo sapiens -0.034051634761908645 NLAMGVNLTSMSK 2 Oxidation (M) 1396.669 0.66903574 3437 Q6FHF5;P12004;Q6FI35;B4DUA2 PCNA Proliferating cell nuclear antigen yes no 0 2 0 2 0 1 48.502 48.567 3 0.010365 13740 20230619_1881_Aki_TMTPro18x_K_F2 63.16 55.246 161270 125980 132010 142680 149780 151080 152820 148850 179660 151160 163430 135060 162900 123880 145160 154120 181450 148760 148860 115510 136840 142870 154240 152160 154730 152290 180780 152220 168210 137590 165380 129840 149950 154080 173040 141470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 316480000 19727 3437 18465 37392 29966 29966 2066;2067 1 9606 Homo sapiens -0.013432019139145268 NLAMGVNLTSMSK Oxidation (M) 1380.6741 0.67412112 3437 Q6FHF5;P12004;Q6FI35;B4DUA2 PCNA Proliferating cell nuclear antigen yes no 0 1 0 3 0 1 53.146 53.205 2 0.017316 15575 20230619_1882_Aki_TMTPro18x_K_F3 85.958 64.494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19728 3437 18465 37393 29967 29967 2066;2067 1 9606 Homo sapiens -0.0009889805132843321 NLAMGVNLTSMSK Unmodified 1364.6792 0.67920649 3437 Q6FHF5;P12004;Q6FI35;B4DUA2 PCNA Proliferating cell nuclear antigen yes no 0 0 0 4 0 1 58.341 58.343 2 1.0504E-20 17629 20230619_1883_Aki_TMTPro18x_K_F4 220.5 189.94 95356 80619 97041 82529 56446 97077 85267 80877 98432 107700 82563 65718 95744 75227 74830 95676 90612 69594 88205 73831 97775 83451 62902 96646 84755 84444 98989 106160 85902 68974 96283 78400 77437 94307 86399 66454 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104160000 19729 3437 18465 37394 29968 29968 1 9606 Homo sapiens 0.011454058113031351 NLANTANPR Unmodified 969.49919 0.49919194 4647 Q9P2B4;Q9NPX3 CTTNBP2NL;DKFZp547A023 CTTNBP2 N-terminal-like protein yes no 0 0 0 7 0.816 1 1 1 32.441 32.488 2 0.00097889 6313 20230619_1887_Aki_TMTPro18x_K_F7 134.26 107.15 22722 14568 25687 21833 26884 33331 26017 28590 27192 23135 35696 40059 31050 28491 30331 16451 44746 34220 21005 13408 25846 21600 27825 32699 26343 29380 27940 24186 36051 39465 31827 29138 31565 17771 42601 32353 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20004000 19730 4647 18466 37395;37396;37397 29969;29970;29971 29970 3 9606 Homo sapiens 0.013222309808384125 NLANTVTEEILEK Unmodified 1472.7722 0.77223848 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2YQV8;B7Z213;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 4 0.816 1 1 1 62.589 62.616 3 6.7641E-11 19428 20230619_1883_Aki_TMTPro18x_K_F4 175.74 138.9 253540 182940 296090 270490 225870 251850 237940 263880 253080 312450 344990 304300 281230 279100 272830 320850 308300 330460 234590 168260 295970 265750 240400 256290 240070 270020 260780 312770 346550 308570 288900 290800 279830 322170 294790 313690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3201099999.9999995 19731 1680;2265 18467 37398;37399;37400 29972 29972 1 9606 Homo sapiens 0.054763250698897536 NLAPDEK Unmodified 785.39193 0.3919329 3127 Q86Y74;J3KPP4;O95232;Q6PKC2;A8K3C5;D6RDI2;C9JL41;O95232-2;E7EN55 CROP;LUC7L3 Luc7-like protein 3 yes no 0 0 0 3 0 1 39.687 39.743 2 0.019524 9494 20230619_1882_Aki_TMTPro18x_K_F3 105.81 40.556 56966 30865 71297 72766 91151 104160 72809 96664 85857 62386 103900 108210 76489 84890 81869 46887 104820 103720 52673 28631 71538 70370 92625 102660 74974 98283 87301 66292 104580 106920 79332 86288 84221 51038 100060 97915 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31718000 19732 3127 18468 37401 29973 29973 1 9606 Homo sapiens -0.009347389533786554 NLAQEPSQR Unmodified 1041.5203 0.52032131 833 Q15334;A0A087WW77;A0PJG1 LLGL1 Lethal(2) giant larvae protein homolog 1 yes no 0 0 0 3 0 1 32.473 32.545 2 0.0034014 6601 20230619_1882_Aki_TMTPro18x_K_F3 97.431 68.282 6645.8 4716.8 9353.7 8444.7 12459 12860 8039 12752 12773 7240.8 13280 14339 15295 11141 11697 6800.5 13122 12852 6160.8 4349.6 9314.1 8276.5 12573 12659 8524.2 12872 12743 7834.9 13690 14121 15360 11381 12007 7260.8 12540 12144 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5422300 19733 833 18469 37402 29974 29974 1 9606 Homo sapiens 0.0012219628970342455 NLAQLNDIHQQYK Unmodified 1583.8056 0.80560429 4519 Q9H6E4;B0QY51 CCDC134 Coiled-coil domain-containing protein 134 yes no 0 0 0 1 0 1 47.229 47.229 3 4.4816E-09 13216 20230619_1880_Aki_TMTPro18x_K_F1 168.89 129.26 52311 41953 48729 53800 50080 54332 55506 61458 59039 59924 65813 57903 64640 55154 62352 73340 66825 65891 48338 38509 49849 53371 52054 55061 55790 62232 60218 60567 67107 58850 65902 57936 63753 72959 63888 62666 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71567000 19734 4519 18470 37403 29975 29975 1 9606 Homo sapiens 0.037053716324408015 NLATTVTEEILEK Unmodified 1459.777 0.77698951 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PH35;B4DMD1;A0A6Q8PHG0 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 4.4 1.02 1 2 1 1 63.525 63.553 2;3 8.0171E-11 19836 20230619_1883_Aki_TMTPro18x_K_F4 216.91 171.78 1309800 1187500 1348900 1491000 1305900 1522000 1443000 1482100 1518100 1635200 1738800 1806700 1791100 1642700 1678100 1910200 1327100 2168200 1212200 1089300 1367300 1481100 1363900 1535600 1450000 1521200 1551800 1649300 1776500 1820900 1821000 1713800 1690700 1929000 1279000 2053500 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2356300000 19735 3254 18471 37404;37405;37406;37407;37408 29976;29977;29978;29979 29977 4 9606 Homo sapiens 0.06549209212653295 NLCLHLK Unmodified 896.49021 0.49020716 1819 Q6PGP7;A0A8V8TMA8;A0A8V8TMB2;A0A8V8TLS3;A0A8V8TLT2;A0A8V8TNJ4;A0A8V8TLU2;A0A8V8TLT7;A0A8V8TLU5;A0A8V8TNK4;A0A8V8TN92;A0A8V8TLR0;A0A8V8TNK9;A0A8V8TNA2;A0A8V8TNJ9;D6RCE2;H0Y915 TTC37 Tetratricopeptide repeat protein 37 yes no 0 0 0 3 0 1 46.014 46.092 3 0.022199 12336 20230619_1882_Aki_TMTPro18x_K_F3 73.324 14.505 280490 226680 236640 264000 276430 311960 293150 276390 371080 147630 148090 134650 166870 110520 232410 180690 162410 120910 259000 207870 244810 264170 284720 310980 296770 281460 364030 156160 163340 136740 172670 118570 231010 177280 155790 115630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174870000 19736 1819 18472 37409 29980 29980 1 9606 Homo sapiens 0.03782166090820738 NLCSDDTPMVR Unmodified 1306.5646 0.56457067 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 2.75 0.829 2 1 1 42.757 42.821 2 4.5125E-23 10811 20230619_1882_Aki_TMTPro18x_K_F3 256.9 230.78 163920 126840 132520 140670 129870 152560 154930 144830 166750 189630 187380 191390 208860 182640 175570 215290 225420 218650 151280 116280 137260 141130 135930 153220 155130 149710 170160 189280 192230 193920 210970 190400 182080 215890 215150 207660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 396290000 19737 1860 18473 37410;37411;37412;37413 29981;29982;29983 29982 3 9606 Homo sapiens -0.07644903670643544 NLCSDDTPMVR Oxidation (M) 1322.5595 0.55948529 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 1 0 2.5 0.5 1 1 39.127 39.187 2 0.00048879 9156 20230619_1882_Aki_TMTPro18x_K_F3 112.85 102.47 115940 94879 106530 108200 114230 123180 122400 114550 124920 137730 160990 146390 141900 119890 132730 154780 163530 155790 107130 86983 109130 108400 118240 123260 123050 118260 128570 138190 162530 147390 145000 126390 136950 154970 156110 147990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 128580000 19738 1860 18473 37414;37415 29984;29985 29984 1187 2 9606 Homo sapiens -0.08889207533252375 NLCYHAQTR Unmodified 1161.5349 0.53492552 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;H0Y659;Q5H935 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 5.5 2.69 1 1 1 1 30.868 30.905 3 2.5682E-06 6369 20230619_1880_Aki_TMTPro18x_K_F1 157.66 135.61 68797 45938 67298 66369 73939 83902 74417 71622 83351 68802 86076 78379 76703 69011 73678 77280 100270 78874 63530 42255 68584 65555 76316 83199 75292 73949 84445 70014 87723 78866 78493 71910 76451 77614 95533 74977 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 105990000 19739 594 18474 37416;37417;37418;37419 29986;29987;29988 29986 3 9606 Homo sapiens -0.039380548338158405 NLDAQYEMAR Unmodified 1209.5448 0.5448215 4153 Q7L4I2-2;Q7L4I2;B3KMH4 RSRC2;FLJ11021 Arginine/serine-rich coiled-coil protein 2 yes no 0 0 0 3 0 1 43.457 43.527 2 1.6367E-05 11141 20230619_1882_Aki_TMTPro18x_K_F3 162.36 132.19 79273 57776 73531 81751 82999 90916 87466 89204 98232 99634 104550 103980 108830 86564 91572 95523 115400 102840 73207 53110 75367 80683 85596 91180 88277 91519 99743 100250 107140 104740 110090 90382 94748 96257 110100 97650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46943000 19740 4153 18475 37420 29989 29989 1 9606 Homo sapiens -0.05156911619087623 NLDDGIDDERLR Unmodified 1429.6797 0.67973508 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;A0A7I2V4N4;A0A7I2YQE4;A0A024R9E2;Q3ZCS4;Q9H361;Q5VX58;Q2VIP3;H0YAP2 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 yes no 0 0 1 1.5 0.5 1 1 42.584 42.624 3 1.2974E-40 11227 20230619_1880_Aki_TMTPro18x_K_F1 262.43 217.81 280660 231610 260190 262960 277710 298090 295120 286280 344300 337130 336150 300590 379890 288160 328680 378810 328230 314930 259380 212320 266280 263540 287580 298590 298090 294610 347760 336940 346930 306610 383630 302550 335380 375520 313960 299850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 777190000 19741 566 18476 37421;37422 29990;29991 29990 2 9606 Homo sapiens -0.01791759943625948 NLDENGLDLLSK Unmodified 1329.6776 0.67760981 56 A0A024QZP7;Q5H9N4;P06493;A0A024QZJ8;P06493-2 CDC2;DKFZp686L20222;CDK1 Cyclin-dependent kinase 1 yes no 0 0 0 3.5 0.5 1 1 60.489 60.505 2;3 1.6114E-05 18517 20230619_1883_Aki_TMTPro18x_K_F4 164.48 77.171 90781 72604 82917 88982 80020 99101 95979 96761 102500 103860 107070 94556 114360 94515 93955 117220 105780 105810 83870 66614 84895 88655 83873 99363 96070 99189 104250 104310 109850 96494 115500 98705 96681 116730 101090 100620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20108000 19742 56 18477 37423;37424 29992;29993 29993 2 9606 Homo sapiens 0.02595811318565211 NLDEQLSAPK Unmodified 1113.5666 0.5666028 1957 A5YKK6;A5YKK6-2;A5YKK6-3;A5YKK6-4;B4DYL7;H3BNB1 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 4 0 1 46.961 47.003 3 0.012224 12620 20230619_1883_Aki_TMTPro18x_K_F4 67.153 43.917 41335 44377 41284 58073 56495 56349 65988 54472 72683 65745 70957 71880 66724 62426 68009 75197 76551 76580 38295 40703 42282 57465 57676 57084 66131 56131 73569 66048 72717 72377 68345 65353 69646 75420 73161 72721 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70750000 19743 1957 18478 37425 29994 29994 1 9606 Homo sapiens 0.014362164011345158 NLDFQDVLDK Unmodified 1205.5928 0.59281755 4728 Q9Y3I0;B4DNA0 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 4 0.816 1 1 1 61.574 61.601 3 5.0237E-05 18980 20230619_1883_Aki_TMTPro18x_K_F4 124.1 84.838 295060 268830 292080 316320 279080 329030 334330 335780 365800 361820 359610 387540 393200 329680 358880 446240 350760 413080 273010 246440 296950 315780 292560 331900 334920 343280 370700 365020 370940 390360 398540 348100 365610 444440 336110 392470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 447630000 19744 4728 18479 37426;37427;37428 29995;29996 29995 2 9606 Homo sapiens -0.0017551442738295009 NLDGISHAPNAVK Unmodified 1334.6943 0.69426293 1681 A0A7I2YQQ3;A8K335;Q92820 GGH Gamma-glutamyl hydrolase yes no 0 0 0 7 0.816 1 1 1 42.701 42.758 3 4.0776E-08 10379 20230619_1887_Aki_TMTPro18x_K_F7 159.82 108.73 224750 183360 199340 251770 238310 261930 282370 262880 313040 239690 257240 243030 260060 210110 229570 257600 245890 234080 207630 168420 205560 248660 245670 264050 282930 267960 314690 243710 266570 245570 263830 220340 235030 256730 235030 222630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 565910000 19745 1681 18480 37429;37430;37431 29997;29998 29997 2 9606 Homo sapiens 0.040303569951674945 NLDIERPTYTNLNR Unmodified 1717.8747 0.87474649 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;B4DDU2;F8VQQ4;F8VVB9;C9JDS9;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;P0DPH7-2;C9J2C0;Q9NY65-2;Q9NY65;Q6PEY2;Q7Z3M3;A0A7P0T945;A0A7P0TA31 TUBA1B;TUBA1A;TUBA4A;TUBA1C;TUBA2;TUBA8;TUBA3E;DKFZp686L04275 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain no no 0 0 1 5.5 2.69 1 1 1 1 45.176 45.214 3 2.729E-16 11382 20230619_1887_Aki_TMTPro18x_K_F7 202.25 173.54 11989000 7183800 10720000 12989000 9415400 15536000 12001000 11254000 16695000 18063000 17479000 22140000 20388000 18743000 19387000 20730000 20551000 27656000 11058000 6630800 10996000 12656000 10005000 15397000 12095000 11980000 16784000 18018000 18056000 22155000 20678000 19554000 19806000 21182000 19701000 26168000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 62492000000 19746 2408;3747;4144 18481 37432;37433;37434;37435 29999;30000;30001;30002 30001 4 9606 Homo sapiens 0.04452410861381395 NLDISRPDK Unmodified 1056.5564 0.55637247 247 A0A024R3J7;P46977;P46977-2;H0YET6 hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 0 1 6.5 0.5 1 1 40.886 40.966 3 0.00207 9620 20230619_1887_Aki_TMTPro18x_K_F7 93.477 43.004 196150 144620 172020 209070 236040 268340 256100 249690 348880 249220 273740 310760 324480 288680 253100 324800 324080 331130 181080 132970 178000 206490 240920 266300 259720 256360 346880 254030 286780 311940 326360 300320 262940 325970 309440 314420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 232640000 19747 247 18482 37436;37437 30003;30004 30004 2 9606 Homo sapiens 0.030356534665543222 NLDLAVLELMQSSVDNTK Unmodified 1989.0089 0.0088567119 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7.5 0.5 1 1 66.005 66.027 3 4.9933E-39 20344 20230619_1888_Aki_TMTPro18x_K_F8 261.8 229.41 44648 35317 45127 42470 38672 44704 47843 44451 43568 51455 59759 55701 56424 52444 55128 60630 53319 56342 41280 32398 45692 42349 40918 45030 47600 45629 45285 51741 60387 56273 57646 54607 56015 60548 51054 53548 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 624570000 19748 3758 18483 37438;37439 30005 30005 1 9606 Homo sapiens 0.053912637812345565 NLDLLYK Unmodified 877.49092 0.49091866 419 A0A024R6Z0;O43237-2;O43237;B4E2E0;B4DHD8 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 8 0 1 56.854 56.911 3 0.05317 16495 20230619_1888_Aki_TMTPro18x_K_F8 58.782 24.985 44767 37905 42364 50257 42858 48495 52830 47257 58565 61201 60556 69389 67932 56965 55913 65352 63535 71350 41386 34798 43297 49700 44759 49140 52853 48768 59443 61348 62412 69604 68523 59623 57543 65849 60770 67677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17425000 19749 419 18484 37440 30006 30006 1 9606 Homo sapiens 0.047272840115169856 NLDPEQMSQVLDAMFEK Unmodified 1993.9125 0.91251349 424 B3KY43;Q6DHZ2;A0A024R712;P31323;Q75MP1 PRKAR2B cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 6 0.816 1 1 1 66.06 66.097 3 2.2985E-08 20556 20230619_1887_Aki_TMTPro18x_K_F7 96.143 78.226 37621 29234 30616 39101 35451 43462 34492 39349 35134 44977 46179 48315 49750 47174 49252 54896 47739 56158 34723 26850 31809 38713 36465 43506 34881 40623 36250 45240 47042 48866 50662 49086 50043 55097 45749 53295 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79248000 19750 424 18485 37441;37442;37443 30007;30008 30008 2 9606 Homo sapiens -0.04468627050368923 NLDVQLLDTK Unmodified 1157.6292 0.62920306 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 6 0 1 57.674 57.743 3 0.038452 17197 20230619_1886_Aki_TMTPro18x_K_F6 43.544 18.752 74670 53087 70250 64243 82486 79028 65841 63265 91158 72588 83595 70503 94803 55606 91783 84803 81496 93530 68955 48724 71845 64168 84232 78474 68149 65976 91102 72851 86531 71243 96070 59536 92780 85245 78158 88699 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 250830000 19751 3440 18486 37444 30009 30009 1 9606 Homo sapiens 0.05669362469302541 NLEALALDLMEPEQAVDLTLPK Oxidation (M) 2438.2614 0.26144258 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 0 1 0 5 0 1 65.591 65.635 4 1.7332E-05 20412 20230619_1885_Aki_TMTPro18x_K_F5 93.73 83.566 18202 14604 14599 14781 20588 17303 20336 18367 19939 20278 17175 22609 20161 17465 21067 20953 18871 21377 16802 13375 15217 14958 20864 17353 20496 18743 20245 20456 17930 22648 20526 18367 21286 21026 18095 20290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79048000 19752 150 18487 37445 30010 30010 82 1 9606 Homo sapiens 0.09984232001215787 NLEALALDLMEPEQAVDLTLPK Unmodified 2422.2665 0.26652796 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 0 0 0 5.5 0.5 1 1 67.437 67.479 3 2.3215E-08 21151 20230619_1885_Aki_TMTPro18x_K_F5 108.25 100.54 15945 12978 14468 15064 12177 12370 16562 18590 17470 15513 14923 16782 16279 16146 17402 21345 17818 17841 14732 11900 14789 15019 12940 12860 16480 18475 17641 15876 15510 16967 16643 16933 17721 21160 17044 16982 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29142000 19753 150 18487 37446;37447 30011;30012 30011 2 9606 Homo sapiens 0.1122853586380188 NLEAMNPPLFLR Unmodified 1413.7439 0.74385566 2509 B4DK32;Q14139;Q14139-2;B7Z7P0 UBE4A Ubiquitin conjugation factor E4 A yes no 0 0 0 2 0 1 61.938 61.948 2 0.025325 19462 20230619_1881_Aki_TMTPro18x_K_F2 61.833 37.678 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19754 2509 18488 37448 30013 30013 1 9606 Homo sapiens 0.053533486796141005 NLEAMNPPLFLR Oxidation (M) 1429.7388 0.73877028 2509 B4DK32;Q14139;Q14139-2;B7Z7P0 UBE4A Ubiquitin conjugation factor E4 A yes no 0 1 0 8 0 1 56.288 56.345 2 0.040446 16316 20230619_1888_Aki_TMTPro18x_K_F8 63.426 31.492 23477 18775 22072 25129 25319 24400 21462 24967 29460 24727 25418 23253 26388 23127 25144 28057 27660 23614 21695 17242 22596 24841 25930 24748 22123 25455 29395 24969 26296 23686 26851 24112 25744 27862 26412 22490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34974000 19755 2509 18488 37449 30014 30014 1534 1 9606 Homo sapiens 0.041090448170052696 NLEAVETLGSTSTICSDK Unmodified 1923.9095 0.9095366 3387;959 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z1Q9;B7Z3F8;B3KV59;B4DHD7;P05023;P05023-4;P05023-3;B7Z3V1;P05023-2;B3KRI1;B2RAQ4;P50993;B1AKY9;A0A0S2Z3W6;H0Y7C1;B3KX35;B3KW93;B4DIQ8;Q13733;E9PRA5;A0A669K9X0 ATP1A3;ATP1A1;ATP1A2;ATP1A4 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4 no no 0 0 0 4.67 0.471 1 2 57.01 57.053 3;4 0.02764 16696 20230619_1885_Aki_TMTPro18x_K_F5 50.226 32.088 135560 99061 138970 136450 109530 153100 137060 143190 165460 162260 169540 170920 166640 160450 145440 199010 169700 210840 125290 91033 140460 134930 117120 153200 137560 147460 167100 163250 173610 172840 169300 167830 149930 199860 162420 199980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2020899999.9999998 19756 959;3387 18489 37450;37451;37452 30015;30016 30015 2 9606 Homo sapiens -0.015461789035043694 NLEAYAANPHSFVFTR Unmodified 1835.8955 0.89548193 973 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55-2;Q9NQ55;Q9NQ55-3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog yes no 0 0 0 1.5 0.5 1 1 54 54.014 3 2.6528999999999997E-19 16172 20230619_1881_Aki_TMTPro18x_K_F2 202.34 167.91 43238 40583 46174 47600 44366 48296 50213 53050 67339 54069 53046 51047 61797 46590 49246 63198 58353 56793 40040 37197 46643 47522 46396 48903 50821 53884 67035 54521 55452 51840 62170 49107 50877 62840 55733 54016 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199580000 19757 973 18490 37453;37454 30017 30017 1 9606 Homo sapiens 0.010970012409870833 NLEEEAGVQDALNIR Unmodified 1669.8271 0.8271276 400 A0A024R6K3;Q86TU7 SETD3 Histone-lysine N-methyltransferase setd3 yes no 0 0 0 2 0 1 55.695 55.715 3 5.7497E-06 16875 20230619_1881_Aki_TMTPro18x_K_F2 116.78 89.046 35444 27024 33899 37123 34643 36781 35284 35789 45559 39520 39505 38042 43283 36972 42068 43679 44315 49939 32749 24829 34590 36647 35952 37195 35862 36736 45585 39714 40977 38663 44003 38543 42933 44129 42418 47346 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157020000 19758 400 18491 37455 30018 30018 1 9606 Homo sapiens 0.019007118705530957 NLEEEENLGK Unmodified 1173.5513 0.55134667 2830 D3DVC4;P48681 NES Nestin yes no 0 0 0 1 0 1 46.194 46.194 2 3.2021E-05 12806 20230619_1880_Aki_TMTPro18x_K_F1 154.24 81.598 14032 11015 13969 14748 12596 17965 18808 16854 33978 24138 19394 23887 30260 24558 16152 47584 36870 44683 12971 10116 14189 14627 13420 17883 19047 17490 33157 24032 21068 24322 29899 26532 17994 47172 35131 42442 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43883000 19759 2830 18492 37456 30019 30019 1 9606 Homo sapiens -0.028486951867307653 NLEELEEK Unmodified 1002.487 0.4869555 755 Q9UN86;Q9UN86-2;A0A024RDE5;A0A024RDB2;A8K6V7;A0A7I2YQD9;A0A7I2V3P9;A0A7I2V3E2;A0A7I2V647;A0A7I2YQS2 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 0 1.5 0.5 1 1 50.083 50.108 3 0.00012732 14384 20230619_1880_Aki_TMTPro18x_K_F1 144.9 37.99 166070 124390 151320 168820 153400 170080 164500 172400 214660 207780 221640 200470 218960 170160 167570 235580 216050 202830 153360 114280 155070 166820 159600 171920 166820 176890 216100 207880 226720 202950 221030 180020 174350 233650 206160 193050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 202010000 19760 755 18493 37457;37458 30020;30021 30020 2 9606 Homo sapiens -0.014188502728416097 NLEELNISSAQ Unmodified 1216.5935 0.59354583 3101 Q8IY71;I3L0E3;Q9Y2R5 MRPS17;hCG_1984214 28S ribosomal protein S17, mitochondrial yes no 0 0 0 2.5 0.5 1 1 56.859 56.886 2 0.00021111 17143 20230619_1882_Aki_TMTPro18x_K_F3 128.28 111.18 57742 46835 51518 51303 54784 58917 51921 55984 70681 68855 63392 62442 74554 57340 64303 80470 66385 70154 53342 42923 52889 51568 56609 58956 53115 57716 70695 68715 65857 63533 75210 60559 65775 79867 63522 66728 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106400000 19761 3101 18494 37459;37460 30022 30022 1 9606 Homo sapiens -0.0060871977832448465 NLEENYCR Unmodified 1096.4608 0.46075752 2779 CON__P06868;A0A0F7G8J1 yes no 0 0 0 2 0 1 37.223 37.284 2 0.0021117 8610 20230619_1881_Aki_TMTPro18x_K_F2 109.71 25.146 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19762 2779 18495 37461 30023 30023 1 9606 Homo sapiens -0.08361442715977319 NLEGWWK Unmodified 931.4552 0.45520186 1908 A1X283;G3V144;A0A1B0GUF2 SH3PXD2B SH3 and PX domain-containing protein 2B yes no 0 0 0 1 0 1 59.296 59.296 2 0.018139 18211 20230619_1880_Aki_TMTPro18x_K_F1 107.66 36.746 44894 39188 44957 41981 71215 94892 69552 72858 73290 65119 61010 68992 71225 60505 71998 65364 70038 77002 41530 35898 46078 42861 71969 91381 70311 75668 73985 66372 63702 69545 72407 62970 73054 66283 67079 72988 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41680000 19763 1908 18496 37462 30024 30024 1 9606 Homo sapiens -0.013267534454712404 NLEGYVGFANLPNQVYR Unmodified 1952.9745 0.97446054 1949 Q8TC62;E7EPK1;A4GYY8;Q3LIE9;Q16181;Q16181-2;E7ES33;B4DUD6;A8K3D0;Q59EY4;Q3B7A3;A0A5F9ZGZ7 SEPT7;DKFZp686F17268;Nbla02942 Septin-7 yes no 0 0 0 2.5 0.5 1 1 61.899 61.918 3 1.379E-59 19448 20230619_1881_Aki_TMTPro18x_K_F2 245.19 236.87 224130 183610 206970 229820 188590 218290 213380 232060 224480 263810 250980 280800 283240 252120 257800 311380 275650 305580 207120 168490 211530 228160 198120 221910 214210 236960 229370 265310 257900 283270 286920 264080 263890 311480 263770 290200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1539399999.9999998 19764 1949 18497 37463;37464 30025 30025 1 9606 Homo sapiens 0.036092284753294734 NLELLSVAR Unmodified 1013.5869 0.58694431 2135 A8K9D2;Q9H0U6 MRPL18 39S ribosomal protein L18, mitochondrial yes no 0 0 0 8 0 1 54.182 54.254 2 0.0058812 15380 20230619_1888_Aki_TMTPro18x_K_F8 104.05 63.696 236330 199750 218070 261130 244990 273600 278040 280650 323190 267820 274000 244530 288950 244670 264580 280910 265390 255950 218430 183360 223740 258770 253330 275830 279760 285870 324590 270770 283910 249470 293270 254290 269600 280300 253850 243400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 323060000 19765 2135 18498 37465 30026 30026 1 9606 Homo sapiens 0.08069431851617992 NLEPEWAAAASEVK Unmodified 1513.7413 0.7412727 1478 A0A384NPU5;Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 0 4.29 1.03 2 2 2 1 59.729 59.762 2;3 1.6178E-11 18215 20230619_1883_Aki_TMTPro18x_K_F4 212.95 177.54 182610 149370 182540 179940 165590 199120 201820 194980 211100 221590 223150 227090 244170 213590 239900 263130 251130 275910 168860 137010 185190 179510 174410 199780 201720 200200 215090 222680 229390 229890 248380 223400 244780 264260 240340 261840 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1527599999.9999998 19766 1478 18499 37466;37467;37468;37469;37470;37471;37472 30027;30028;30029;30030 30028 4 9606 Homo sapiens 0.0049517175564233185 NLESAVK Unmodified 759.41267 0.41266834 4706 Q9Y2A7;Q9Y2A7-2;A0A994J4I5;A0A994J6K9 NCKAP1 Nck-associated protein 1 yes no 0 0 0 6 0 1 42.918 43.011 2 0.058031 10777 20230619_1886_Aki_TMTPro18x_K_F6 79.474 17.512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19767 4706 18500 37473 30031 30031 1 9606 Homo sapiens 0.023338514262945864 NLETFCEETR Unmodified 1297.5609 0.5608655 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;A0A6I8PIP7;A0A6I8PTV8 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 2 0 1 46.298 46.377 2 4.1489E-05 12739 20230619_1881_Aki_TMTPro18x_K_F2 149.33 127.87 198240 153890 171400 197750 175070 201290 192070 194200 221180 240660 235850 264900 300420 251750 220980 271350 310930 325790 183040 141280 176560 196120 182170 203100 193630 200150 224470 241460 244240 267270 300840 261270 231330 275260 296730 308800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 111350000 19768 1603 18501 37474 30032;30033 30032 2 9606 Homo sapiens -0.0760125017284281 NLETFCEETRR Unmodified 1453.662 0.66197652 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;A0A6I8PIP7;A0A6I8PTV8 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 1 3.5 0.5 1 1 41.439 41.492 3 4.6467E-09 10223 20230619_1882_Aki_TMTPro18x_K_F3 178.95 156.76 368790 293560 332700 350700 306820 330290 348670 340720 369350 388280 413450 388830 439550 373330 397890 471080 439540 431610 340680 269270 340650 349300 321870 335880 349910 348730 376980 389850 423120 394440 445800 390730 408040 469410 420090 410390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 580130000 19769 1603 18502 37475;37476 30034;30035 30034 2 9606 Homo sapiens -0.046707984701470195 NLETPLCK Unmodified 973.49027 0.49026674 1240 F8W1A4;A0A140VK93;P54819-5;P54819-2;P54819;P54819-3;B4DLK2;G3V213;F8VZG5;A0A5F9ZHP2;F8VY04;A0A5K1VW67;P54819-6;P54819-4 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes no 0 0 0 6.5 0.5 1 1 48.208 48.291 2 0.001092 13144 20230619_1886_Aki_TMTPro18x_K_F6 149.19 96.022 309390 250880 275620 286610 303400 314910 317080 307270 353680 336910 384120 367060 393400 332080 316510 441840 434620 395470 285810 230010 283250 286970 313250 316240 320080 315260 359410 339870 392880 370380 397650 349420 330400 439280 414430 376260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 258030000 19770 1240 18503 37477;37478 30036;30037 30036 2 9606 Homo sapiens 0.0024612130017658274 NLEVGIR Unmodified 799.4552 0.45520186 4694 Q9UNZ5 C19orf53 Leydig cell tumor 10 kDa protein homolog yes yes 0 0 0 5 0.816 1 1 1 43 43.072 2 0.070324 10784 20230619_1885_Aki_TMTPro18x_K_F5 77.046 37.383 370460 269170 336660 370670 354340 376250 368600 354900 453230 414680 382060 356590 425600 323190 343950 482980 425960 339070 342060 247370 345240 365970 367130 379540 373410 365700 454190 414250 396990 363770 428970 342930 356450 474330 406170 323900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 271880000 19771 4694 18504 37479;37480;37481 30038;30039 30038 2 9606 Homo sapiens 0.04745246554523419 NLFEDQNTLTSICEK Unmodified 1810.8407 0.84072875 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DUC5;B4DPS6;B4DS32;B4DM67 CSE1L Exportin-2 yes no 0 0 0 5 0.816 1 1 1 59.911 59.949 3 0.012159 18368 20230619_1883_Aki_TMTPro18x_K_F4 62.861 55.287 44970 36527 41139 50435 48981 58451 59126 49426 62647 57878 55353 54744 59287 55953 57836 67863 56016 72755 41551 33554 42301 49863 50564 58269 59092 51371 63332 57979 57318 55778 60353 58299 58800 68245 53729 68990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 592100000 19772 1462 18505 37482;37483;37484 30040 30040 1 9606 Homo sapiens -0.03225798412540826 NLFEQLVR Unmodified 1017.5607 0.56072956 126 Q9H0H5;A0A2X0U4T9;A0A024R136;B2RE34;F8VRD2;F8VWY4;Q9BZ74;F8VVE5;F8VVY0;F8VZ66;F8W0L1;F8VWX0;F8VS54;F8VV39;F8VUW9;F8VXH1;F8VV47 RACGAP1;FKSG42 Rac GTPase-activating protein 1 yes no 0 0 0 2 0 1 59.712 59.724 2 0.014296 18501 20230619_1881_Aki_TMTPro18x_K_F2 86.332 10.571 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19773 126 18506 37485 30041 30041 1 9606 Homo sapiens 0.052651626801548446 NLFETPILAR Unmodified 1172.6554 0.65535823 705 A0A024RC59;B4E396;H0YKB5;B3KTQ2;A0A024RC55;Q08431-2;Q08431-3;Q08431-4;Q08431 MFGE8 Lactadherin;Lactadherin short form;Medin yes no 0 0 0 1 0 1 60.123 60.123 2 0.00013198 18541 20230619_1880_Aki_TMTPro18x_K_F1 125.48 84.534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19774 705 18507 37486 30042 30042 1 9606 Homo sapiens 0.07593676431474705 NLFISCK Unmodified 880.44767 0.44767364 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 2.5 0.5 1 1 52.001 52.053 2 0.018139 15034 20230619_1882_Aki_TMTPro18x_K_F3 107.66 33.41 286610 237110 247490 241680 235250 317560 296320 293760 342380 149770 129750 121010 141650 114140 177630 160780 168820 123940 264740 217150 254540 244850 247570 314710 296500 297850 337100 158570 143720 124130 145980 120430 179390 158820 161300 118280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148040000 19775 3578 18508 37487;37488 30043 30043 1 9606 Homo sapiens 0.0026677096259390964 NLFNVVDCK Unmodified 1107.5383 0.53827956 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q59FS8 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 4.5 3.5 1 1 57.69 57.715 3 2.9847E-05 17560 20230619_1880_Aki_TMTPro18x_K_F1 134.25 103.99 396830 339090 349940 362420 317260 342820 340050 348660 407110 477770 438280 380770 477440 400840 398710 547110 436200 438560 366680 310640 358900 364040 332900 348510 343820 359200 412660 472930 449460 391970 482260 420520 409730 540940 417010 417690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1176600000 19776 487 18509 37489;37490 30044;30045 30044 2 9606 Homo sapiens -0.011188047797986655 NLGDQWHK Unmodified 996.47773 0.47772821 3604 Q53R32;P49247 RPIA Ribose-5-phosphate isomerase yes no 0 0 0 7.5 0.5 1 1 42.455 42.494 3 0.00057322 10283 20230619_1887_Aki_TMTPro18x_K_F7 123.86 14.146 101880 82268 103320 98669 107240 94171 105850 108830 139170 117770 121500 102680 138730 94618 87877 134960 144300 105370 94210 75461 104830 98296 110900 95987 107860 110390 139160 118120 126030 104780 138530 100080 93610 133180 137250 100540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64565000 19777 3604 18510 37491;37492 30046 30046 1 9606 Homo sapiens -0.02065154047852502 NLGFETSAFK Unmodified 1112.5502 0.55022446 979 H0Y4F8;H0YCW3;A6PVV8;A0A0B4J1S8;Q9UBF8-3;Q9UBF8-2;Q9UBF8 PI4KB Phosphatidylinositol 4-kinase beta yes no 0 0 0 8 0 1 55.947 56.009 2 2.0866E-05 16143 20230619_1888_Aki_TMTPro18x_K_F8 148.32 92.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19778 979 18511 37493 30047 30047 1 9606 Homo sapiens -0.0015486476497699186 NLGFGMGIEFR Oxidation (M) 1255.6019 0.60194245 4746 Q9Y5B9;Q0VGA3 SUPT16H FACT complex subunit SPT16 yes no 0 1 0 1 0 1 56.92 56.92 3 0.034008 17245 20230619_1880_Aki_TMTPro18x_K_F1 46.985 31.096 21595 16589 17310 21297 18375 21637 23933 23051 22007 23644 23526 21290 23859 20873 21140 25777 25518 25847 19928 15230 17986 21122 19162 21880 23746 23469 22597 23786 24067 21720 24218 21806 21812 25814 24376 24547 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11711000 19779 4746 18512 37494 30048 30048 2893 1 9606 Homo sapiens -0.01563444342718867 NLGFSPEDREENVR Unmodified 1660.7805 0.78051176 3250 O43252;Q05BW9;B7Z4W3 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 1 2.5 0.5 1 1 41.242 41.309 3 8.1468E-09 10153 20230619_1882_Aki_TMTPro18x_K_F3 179.41 149.61 151040 114480 158280 163120 197710 208320 181010 180330 205540 215030 224650 239680 233390 192860 215490 217070 235580 217680 139650 105230 160790 161260 201710 206560 184270 187070 208890 216190 230080 240500 237030 201770 220540 217810 225090 206810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 368870000 19780 3250 18513 37495;37496 30049;30050;30051 30051 3 9606 Homo sapiens -0.02344727960758064 NLGFSPEDREENVRR Unmodified 1816.8816 0.88162278 3250 O43252;Q05BW9;B7Z4W3 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 2 3.5 0.5 1 1 37.093 37.142 4 1.1046E-08 8406 20230619_1883_Aki_TMTPro18x_K_F4 144.73 110.55 38837 32624 41402 36616 45932 52701 40679 38090 47987 52560 49112 38866 49104 38509 47378 47157 49088 39327 35937 29901 41881 36870 47231 51743 41558 40296 48565 51943 50268 40085 50010 40211 48297 46819 46883 37472 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 355390000 19781 3250 18514 37497;37498 30052 30052 1 9606 Homo sapiens 0.00585723741937727 NLGIPIITVLGDSK Unmodified 1438.8395 0.83953018 3873 Q14008-2;Q14008;Q14008-3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 2.67 0.471 1 2 64.236 64.26 2;3 2.246E-06 20243 20230619_1882_Aki_TMTPro18x_K_F3 159.5 92.814 42160 30190 45160 51037 36361 43830 43515 40373 50103 60494 57305 50191 54502 47424 54060 66062 53401 67887 38977 27817 45530 49696 38683 44760 43685 42047 51004 59737 58289 51356 55694 50011 55018 66144 51200 64407 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137300000 19782 3873 18515 37499;37500;37501 30053;30054 30053 2 9606 Homo sapiens 0.137664000714949 NLGLYVK Unmodified 805.46979 0.46978929 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 2.5 0.5 2 2 52.362 52.414 2;3 0.014196 15484 20230619_1881_Aki_TMTPro18x_K_F2 81.635 50.262 844910 649610 678820 747360 859970 917840 951350 911690 1038100 733980 724830 618750 702170 603620 855030 755040 761500 636270 779700 595740 706610 749110 881510 915160 956050 926940 1039300 748390 757190 633550 724750 631070 861000 750090 728640 606050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1039399999.9999999 19783 3900;2497 18516 37502;37503;37504;37505 30055;30056 30055 2 9606 Homo sapiens 0.05927318702663342 NLGPGMTK Oxidation (M) 832.41129 0.41128813 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9;P18206-3 VCL;HEL114 Vinculin yes no 0 1 0 8 0 1 38.023 38.009 2 0.024187 8677 20230619_1888_Aki_TMTPro18x_K_F8 78.516 42.331 41475 34104 40202 40635 72317 75196 65148 80717 92750 47754 48893 51387 56276 43421 49836 54730 62827 52920 38342 31278 41439 40969 72395 73528 66917 81091 91056 50205 52562 51767 56904 45666 51527 54704 59918 50320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27392000 19784 51 18517 37506 30057 30057 25 1 9606 Homo sapiens -0.011621059341223372 NLGPINEWWITGFDGGEK Unmodified 2031.969 0.96904081 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;A0A7I2V311;A0A7I2V5F6 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 8 0 1 64.829 64.85 3 0.00013637 19897 20230619_1888_Aki_TMTPro18x_K_F8 84.829 68.523 23669 17311 25001 20071 16337 21098 23094 25604 18689 27108 30450 24844 27784 26269 29809 27277 30793 34783 21882 15879 25129 20080 17841 21354 22792 25872 19777 27224 30544 25394 28549 27110 30318 27822 29481 32943 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69595000 19785 442 18518 37507 30058 30058 1 9606 Homo sapiens -0.005664951071821633 NLGQNLWGPHR Unmodified 1290.6582 0.6581522 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 3 0 1 45.142 45.218 3 0.016273 11962 20230619_1882_Aki_TMTPro18x_K_F3 63.415 41.329 75217 85558 91850 85515 134450 145550 103290 117110 149450 82564 87419 90236 97295 83976 101210 89632 133450 116320 69848 78265 92516 87192 135460 142000 107360 120590 147010 85690 93079 91076 99261 87172 104550 91508 127250 110260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132030000 19786 617 18519 37508 30059 30059 1 9606 Homo sapiens 0.024449446089874982 NLGQPIK Unmodified 768.44939 0.4493882 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8;B0AZS1 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 0 0 1.5 0.5 1 1 43.143 43.183 2 0.051913 11564 20230619_1880_Aki_TMTPro18x_K_F1 85.359 38.794 52964 36114 51109 49712 65288 60041 57088 57751 71439 66979 74788 71098 73406 59495 66598 59103 82673 73501 48909 33198 52259 49221 66404 59900 58488 59391 72100 67331 76480 71577 74629 61772 68679 60236 78882 69693 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313870000 19787 3544 18520 37509;37510 30060 30060 1 9606 Homo sapiens 0.055901480428588 NLGQSNMDSENTR Oxidation (M) 1480.6212 0.62123392 236 A0A024R3C7;Q13315;E9PIN0;A0A6Q8PH76 ATM Serine-protein kinase ATM yes no 0 1 0 2 0 1 30.795 30.861 3 0.011773 6060 20230619_1881_Aki_TMTPro18x_K_F2 62.287 56.445 1890 1017.9 1915.1 2591.5 4619.8 3630.9 2170 3855.2 4915.6 2569.2 3466.2 2854.8 2825.8 3797.5 2958.8 3399.6 4958 4006.5 1744.1 945.66 1985.4 2497.5 4513.5 3597.7 2416.5 3882.2 4787.7 2680 3591.2 2922.6 2923.8 3859.7 3118.6 3455.8 4717.9 3802.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5453200 19788 236 18521 37511 30061 30061 145 1 9606 Homo sapiens -0.0998518458043236 NLGSIAK Unmodified 701.40719 0.40718903 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 1 0 1 44.745 44.745 2 0.0073584 12199 20230619_1880_Aki_TMTPro18x_K_F1 125.81 40.455 92124 54726 82455 92775 104530 124820 102370 100420 136580 106470 133760 132330 123700 113540 115060 91293 147480 137370 84964 50470 84975 90893 106930 123130 104380 104440 136950 108150 136900 132470 126240 116580 118800 94770 140720 130020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77132000 19789 707 18522 37512 30062 30062 1 9606 Homo sapiens 0.044541726344732524 NLGSINTELQDVQR Unmodified 1585.806 0.80599822 3304 O75396;A0A087X1A9 SEC22B Vesicle-trafficking protein SEC22b yes no 0 0 0 4.5 0.5 1 1 52.654 52.701 3 2.2666E-47 15212 20230619_1883_Aki_TMTPro18x_K_F4 263.59 220.05 124240 105820 119930 123140 106620 114520 115790 121200 136320 133630 135230 118440 148010 126910 140130 147640 136250 139280 114880 97016 121990 122870 112050 116650 116920 123690 137700 133950 139260 121310 150270 131740 142460 147560 130420 132370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1070299999.9999999 19790 3304 18523 37513;37514 30063;30064 30063 2 9606 Homo sapiens 0.03652746561647291 NLGTALAELR Unmodified 1056.5928 0.59275797 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 7.5 0.5 1 1 55.694 55.755 2 0.0010662 16048 20230619_1888_Aki_TMTPro18x_K_F8 112.95 70.967 183900 147280 161200 178240 141990 208880 176600 190390 241820 152810 148190 143040 160030 125580 174410 167630 158060 153390 169850 135110 165520 177860 150520 208320 178060 194740 238640 156340 156980 145160 163600 132380 176160 167010 151350 145860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133920000 19791 1292 18524 37515;37516 30065 30065 1 9606 Homo sapiens 0.0667253036326656 NLGTIAK Unmodified 715.42284 0.4228391 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;A0A7P0TBC2;Q96GW1;A0A7P0T885;A0A7P0T8R3 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 3.67 3.09 1 1 1 44.725 44.762 2 0.0052094 11395 20230619_1888_Aki_TMTPro18x_K_F8 142.64 6.7794 2007900 1139500 1672700 1930200 2470000 2551000 2325900 2417200 3070600 2244500 2771500 2842100 2571500 2371400 2552700 1665200 3236900 2937400 1850500 1051100 1740600 1890900 2499300 2528400 2375700 2473400 3070800 2297400 2849300 2839900 2631900 2425300 2628500 1759100 3088400 2777600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1437800000 19792 3452 18525 37517;37518;37519 30066;30067;30068 30068 3 9606 Homo sapiens 0.053744591515169304 NLHGDGIALWYTR Unmodified 1514.763 0.7630112 1479 A8K7T4;A0A384NPY7;Q12907;B4DWN1;A0A8Q3WK65;D6RBV2;D6RIU4;D6RDX1;D6RBH1 LMAN2 Vesicular integral-membrane protein VIP36 yes no 0 0 0 1.5 0.5 1 1 51.964 51.983 3 3.2061E-16 15311 20230619_1881_Aki_TMTPro18x_K_F2 214.47 189.63 75621 40602 65237 74397 74195 74442 75474 77473 95484 81472 74566 83526 84787 75102 94407 88800 94419 98154 69695 37506 67312 72300 76390 75309 76634 79047 95311 82213 78035 84389 86703 78478 95798 89558 90365 93115 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 297380000 19793 1479 18526 37520;37521 30069;30070 30070 2 9606 Homo sapiens 0.026220212948828703 NLHNVLDSK Unmodified 1038.5458 0.54580778 3607 P49454 CENPF Centromere protein F yes yes 0 0 0 7 0 1 43.218 43.297 3 0.04363 10606 20230619_1887_Aki_TMTPro18x_K_F7 49.189 23.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19794 3607 18527 37522 30071 30071 1 9606 Homo sapiens 0.028076708121261618 NLHPDVTGR Unmodified 1007.5148 0.514842 80 A0A7I2YQB7;D6RF40;D6R9R7;A0A7I2V5B8;A0A7I2YQC7;A0A7I2V2J7;B4DHK6;A0A024R069;A0A0A0MTL5;Q13309-2;Q13309;A0A7P0S4R7 SKP2 S-phase kinase-associated protein 2 yes no 0 0 0 4.5 0.5 1 1 32.083 32.153 3 0.001497 6375 20230619_1883_Aki_TMTPro18x_K_F4 93.667 63.097 55456 37717 50709 55293 58698 60485 56962 59211 64965 61847 73120 68696 75768 61092 62969 68665 81412 66673 51188 34696 52046 54444 60276 60732 57801 60647 66047 62576 74709 69198 76625 63676 65297 68762 77614 63401 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69139000 19795 80 18528 37523;37524 30072;30073 30072 2 9606 Homo sapiens 0.011385174979068324 NLHVVFTMNPSSEGLK Oxidation (M) 1787.8876 0.88761936 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 0 1 0 1 50.792 50.792 3 0.0050528 14694 20230619_1880_Aki_TMTPro18x_K_F1 66.982 46.601 25989 19508 21944 29079 23205 24033 30160 27978 27815 31390 33117 30084 33705 23850 31425 33189 34701 32484 23988 17942 22693 28498 24173 24771 29930 28416 28692 31483 33739 30403 34239 25325 32185 33156 33155 30869 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90524000 19796 3881 18529 37525 30074 30074 2552 1 9606 Homo sapiens 0.0251910592924105 NLIDAGVDALR Unmodified 1155.6248 0.62478638 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5;B7Z1G4;Q6RUP8 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 0 0 5.5 0.5 1 1 57.617 57.681 2 6.0492E-06 16939 20230619_1885_Aki_TMTPro18x_K_F5 175.15 102.67 391940 329630 352330 339760 290060 348210 351890 364120 414820 417630 439690 421700 500340 422490 410090 480990 450650 502090 362170 301900 360200 342700 308280 351940 353360 372280 420090 419370 452410 428110 504400 438960 421240 483400 431140 476480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1921799999.9999998 19797 1454 18530 37526;37527 30075;30076 30075 2 9606 Homo sapiens 0.05319898046423077 NLIDAGVDGLR Unmodified 1141.6091 0.60913632 427 P20839-6;B4DNJ7;P20839-5;P20839-7;P20839-3;P20839;P20839-2;P20839-4;Q6ZNB1;A0A024R725;C9J381;B3KRZ3;Q5H9Q6;A0A3B3IRL5 IMPDH1;IMPDH;DKFZp781N0678 Inosine-5'-monophosphate dehydrogenase 1;Inosine-5'-monophosphate dehydrogenase yes no 0 0 0 5 0 1 53.778 53.848 2 2.1188E-08 15408 20230619_1885_Aki_TMTPro18x_K_F5 190.7 143.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19798 427 18531 37528 30077 30077 1 9606 Homo sapiens 0.04399611529379399 NLIEMSELEIK Unmodified 1317.685 0.68500338 4752 Q9Y5X3;Q53FH8;Q6P5V6 SNX5 Sorting nexin-5 yes no 0 0 0 5 0 1 62.469 62.516 3 0.018952 19059 20230619_1885_Aki_TMTPro18x_K_F5 51.013 28.967 54567 62957 70574 71641 79729 74161 89169 84624 87302 105130 86820 78812 97093 76520 84904 99808 83689 83250 50708 57653 70503 71708 82155 75099 89292 86258 89163 104310 89503 81135 98138 80271 86568 98960 80082 79248 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363440000 19799 4752 18532 37529 30078 30078 1 9606 Homo sapiens 0.03886827594647002 NLIHGSDSVESAR Unmodified 1383.6743 0.67425577 3842 Q9NUF9;Q13232;H3BPR2 c371H6.2;NME3 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase 3 yes no 0 0 0 7 0 1 35.524 35.596 3 0.015163 7548 20230619_1887_Aki_TMTPro18x_K_F7 50.843 34.953 13821 11164 15749 17038 22025 20446 17979 17302 21786 16357 18310 18057 19658 16079 20145 20213 17498 17141 12793 10268 15935 16758 22242 20348 18477 17872 21831 16648 19011 18198 20036 16866 20330 20076 16765 16315 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3453100 19800 3842 18533 37530 30079 30079 1 9606 Homo sapiens -0.0022343873542922665 NLILVVR Unmodified 825.54362 0.54362294 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 5.5 1.71 1 1 1 1 1 1 52.856 52.919 2 0.0075915 15155 20230619_1886_Aki_TMTPro18x_K_F6 123.99 40.702 843030 710690 720030 809130 690670 779710 820300 837530 948670 958550 917010 841130 949370 776530 871280 1009300 910300 990200 778730 651460 741780 808900 723770 792190 823670 854820 958200 958620 943250 857410 963990 815750 890320 1009000 871140 940400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1639299999.9999998 19801 826 18534 37531;37532;37533;37534;37535;37536 30080;30081;30082;30083 30082 4 9606 Homo sapiens 0.12387286864998259 NLIPFDQMTIEDLNEAFPETK Unmodified 2464.1832 0.18319226 3323 O75947;O75947-2 ATP5H ATP synthase subunit d, mitochondrial yes no 0 0 0 5.25 1.48 1 1 1 1 65.478 65.514 3 5.8722E-30 20552 20230619_1886_Aki_TMTPro18x_K_F6 162.85 129.17 59610 50646 55851 67675 46473 62567 64976 63375 65915 79608 74120 75878 78498 76415 77820 87611 80659 85387 55104 46499 56998 66857 49594 63640 64485 65141 67489 79452 75885 77215 80009 79358 79358 87715 77179 81107 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 196720000 19802 3323 18535 37537;37538;37539;37540 30084;30085;30086 30086 3 9606 Homo sapiens 0.009667994159372029 NLIPFDQMTIEDLNEAFPETK Oxidation (M) 2480.1781 0.17810688 3323 O75947;O75947-2 ATP5H ATP synthase subunit d, mitochondrial yes no 0 1 0 5 0 1 64.752 64.797 3 4.8278E-05 20074 20230619_1885_Aki_TMTPro18x_K_F5 80.236 72.397 13324 12103 13230 17073 15371 17902 17704 16557 14934 15646 20747 17084 18054 17218 19196 21724 17296 21314 12328 11116 13507 16833 15855 18002 17631 16991 15595 15904 20877 17314 18573 17985 19412 21727 16595 20234 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67836000 19803 3323 18535 37541 30087 30087 1951 1 9606 Homo sapiens -0.0027750444664889073 NLISPDLGVVFLNVPENLK Unmodified 2080.1568 0.15684158 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 2 0 1 65.647 65.654 3 0.0001146 21154 20230619_1881_Aki_TMTPro18x_K_F2 78.78 66.013 6168.3 5902.1 8313.3 6769.5 4499.8 6940.1 7895.8 5361.8 8713.7 6509.5 9147.2 7286.4 9788.4 7033.4 7148 10356 9085.7 10307 5726.1 5408.2 8203.2 6771.5 5076 6966.1 7788.5 5628 8832.6 6549.5 9376.6 7369.7 9836.5 7445 7440.4 10339 8682.9 9785.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 342880000 19804 630 18536 37542 30088 30088 1 9606 Homo sapiens 0.15996943097388794 NLISPELGVVFFNVPEK Unmodified 1901.0299 0.02985015 2915 E9PGC8;P78559;P78559-2;A8K4T7;Q7Z5F9;Q504X9 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 2 0 1 65.186 65.193 3 0.062129 20888 20230619_1881_Aki_TMTPro18x_K_F2 40.614 29.956 20944 17948 23032 23261 22333 27239 23493 22549 37672 25320 26293 29468 31127 30276 26822 30713 29263 34754 19388 16473 23217 23103 23327 27127 24050 23441 37087 25609 27739 29749 31443 31214 27507 31074 28013 32946 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18130000 19805 2915 18537 37543 30089 30089 1 9606 Homo sapiens 0.11537641943050403 NLLALIHR Unmodified 948.58688 0.58688473 3231 O15042-2;O15042;E7ET15;O15042-3 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 0 0 0 5.5 0.5 1 1 53.729 53.803 3 1.1812E-05 15520 20230619_1886_Aki_TMTPro18x_K_F6 133.9 46.948 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19806 3231 18538 37544;37545 30090;30091 30091 2 9606 Homo sapiens 0.11053476642280202 NLLDVIDQAR Unmodified 1155.6248 0.62478638 790 Q05397-7;E7ESA6;Q658W2;A0A059VC25;H0YBP1;A0A8Q3WLM4;Q05397;Q05397-5;Q59GN8;Q59GM6;Q05397-2;I6L996;E9PEI4;B4DH13;H0YBZ1;Q8N9D7;H0YB16;A0A024R9H6;Q05397-6;B4DWJ1;E5RHD8;E5RI03 PTK2;DKFZp666O0110;FAK Focal adhesion kinase 1 yes no 0 0 0 6 0 1 61.315 61.37 2 0.054888 18698 20230619_1886_Aki_TMTPro18x_K_F6 72.922 48.29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19807 790 18539 37546 30092 30092 1 9606 Homo sapiens 0.05319898046423077 NLLHAEFLR Unmodified 1111.6138 0.61382777 583 B3KY10;A0A024R9L9;Q96JC1-2;Q96JC1 VPS39 Vam6/Vps39-like protein yes no 0 0 0 1 0 1 49.175 49.175 3 0.001384 14011 20230619_1880_Aki_TMTPro18x_K_F1 98.048 59.962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19808 583 18540 37547 30093 30093 1 9606 Homo sapiens 0.062485404627977914 NLLHQDAVDLFR Unmodified 1439.7521 0.75211216 382 A0A024R670;A0A087X1F5;A0A087WYV9;P57105 SYNJ2BP;SYNJ2BP-COX16 Synaptojanin-2-binding protein yes no 0 0 0 6.5 0.5 1 1 54.659 54.729 3 9.283E-15 15644 20230619_1887_Aki_TMTPro18x_K_F7 186.16 143.35 107610 103260 119110 117480 114950 119950 125550 129560 149570 134080 128370 122920 151820 111700 133280 154080 147560 151400 99697 94615 119960 117570 119950 121380 126750 131790 150180 134950 133700 124990 153230 117930 136750 153930 141070 143820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 380780000 19809 382 18541 37548;37549 30094;30095 30095 2 9606 Homo sapiens 0.049826189205759874 NLLHVTDTGVGMTR Oxidation (M) 1528.7668 0.76677595 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;A0A7P0TBC2;Q96GW1;A0A7P0T885;A0A7P0T8R3 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 1 0 7.5 0.5 1 1 43.295 43.34 3 9.0113E-09 10615 20230619_1887_Aki_TMTPro18x_K_F7 151.8 130.25 91958 76537 80639 101700 99195 105850 104820 109350 111810 109990 113230 126490 100740 83228 105560 109690 123350 124990 84954 70271 83266 100660 101710 106800 105580 111490 113580 111570 115680 126130 103450 88700 108260 110640 117860 118550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 396210000 19810 3452 18542 37550;37551 30096;30097 30096 2100 2 9606 Homo sapiens 0.023543230063978626 NLLHVTDTGVGMTR Unmodified 1512.7719 0.77186132 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;A0A7P0TBC2;Q96GW1;A0A7P0T885;A0A7P0T8R3 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 8 0 1 47.107 47.155 3 1.7133E-37 12311 20230619_1888_Aki_TMTPro18x_K_F8 239.75 204.54 53427 41026 50034 59095 44075 62517 54612 62651 64487 58276 63873 63206 64973 54537 60565 58026 58723 78852 49358 37713 51091 58213 46665 62900 54789 63863 65084 59281 65607 63649 66052 56767 61555 59424 56343 74599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231470000 19811 3452 18542 37552 30098 30098 1 9606 Homo sapiens 0.03598626869029431 NLLIQNKPGDDPNK Unmodified 1564.8209 0.82092001 511 A0A8Q3SHZ4;A0A494C1F2;A0A024R8B6;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A8Q3WLX1;A0A494BZU9 NUP214 Nuclear pore complex protein Nup214 yes no 0 0 1 8 0 1 47.175 47.223 3 7.2384E-07 12365 20230619_1888_Aki_TMTPro18x_K_F8 134.9 118.24 189270 157120 165550 198820 189350 220260 215960 210170 248100 241820 261670 236840 259580 239460 218190 270160 251730 244700 174850 144180 170740 197590 195680 220830 217170 216260 251450 242610 267530 240890 263160 248430 224740 269450 240480 232710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55680000 19812 511 18543 37553 30099;30100 30100 2 9606 Homo sapiens 0.06110238429664605 NLLLEPSLEAK Unmodified 1225.6918 0.69180331 2431 B3KW95;H0YBN0;Q8NEZ2-2;Q8NEZ2 VPS37A Vacuolar protein sorting-associated protein 37A yes no 0 0 0 6 0 1 59.065 59.13 3 0.0016132 17756 20230619_1886_Aki_TMTPro18x_K_F6 96.334 68.129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19813 2431 18544 37554 30101 30101 1 9606 Homo sapiens 0.08798508537529415 NLLNLDVIK Unmodified 1040.623 0.62299547 962 A0A0A0MTB8;Q8NI36 WDR36 WD repeat-containing protein 36 yes no 0 0 0 1 0 1 62.009 62.009 3 0.024079 19287 20230619_1880_Aki_TMTPro18x_K_F1 62.303 29.078 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19814 962 18545 37555 30102 30102 1 9606 Homo sapiens 0.10430889028452839 NLLPATLQLIDTYASFTR Unmodified 2036.0942 0.094241321 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 6 0 1 67.243 67.286 3 1.7956E-06 21261 20230619_1886_Aki_TMTPro18x_K_F6 102.58 83.254 2110.2 942.48 2080.7 2300.3 1823.7 2455.2 2476 1507.8 2967.3 2767.2 2421.7 1581 1714.4 1314.1 2112 2656.7 2565 2047.2 1945.5 875.9 2114.4 2209.7 1936.1 2446.1 2471.1 1642.6 2972.6 2695.3 2474.2 1652.5 1791.3 1436.3 2168.6 2612 2446.2 1952.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5638200 19815 4061 18546 37556 30103 30103 1 9606 Homo sapiens 0.11763797029243506 NLLQELK Unmodified 856.50182 0.5018177 4593 Q9NTJ3;E9PD53;B3KXX5;B3KVJ5 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 8 0 1 57.215 57.267 3 0.005278 16677 20230619_1888_Aki_TMTPro18x_K_F8 104.45 22.664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19816 4593 18547 37557 30104 30104 1 9606 Homo sapiens 0.06782686385804482 NLLQVDLTK Unmodified 1042.6023 0.60226003 456;2295 A8K8B9;A0A024R7J0;A0A8V8TL59;P17612-2;P17612;A0A7I2V5J4;P22694-4;B4E2L0;P22694-2;P22694-9;P22694-6;P22694-7;P22694-5;P22694;P22694-3;B2RB89;P22694-10;A0A087WVC4;B7ZA00 PRKACA;PRKACB cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 0 0 0 1 0 1 58.171 58.171 2 9.9943E-11 17752 20230619_1880_Aki_TMTPro18x_K_F1 190.02 111.29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19817 456;2295 18548 37558 30105 30105 1 9606 Homo sapiens 0.0826629864880033 NLLSVAYK Unmodified 906.51747 0.51746776 2805;3709;3511;145;3701;3535;3536 D0PNI1;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1;Q6LD62;P27348;E9PG15;Q53RR5;Q3YBA8;V9HWD6;P31946-2;P31946;B5BU24;Q4VY20;Q4VY19;A0A0J9YWE8;Q59EQ2;A0A0J9YWZ2;A0A024R1K7;Q04917;B2R6N6;A2IDB2;P31947-2;P31947;P61981;B3KNB4;B4DE78;B4DHC4;V9HW98;P62258;G9K389;G9K388;P62258-2;B4DJF2;I3L3T1;K7EIT4 YWHAZ;14-3-3 protein;YWHAQ;HEL-S-1;YWHAB;YWHAH;SFN;YWHAG;HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon no no 0 0 0 3.5 1.12 2 2 2 2 55.224 55.259 2;3 0.00060895 16418 20230619_1882_Aki_TMTPro18x_K_F3 131.22 79.877 5164500 4498900 4397700 4285200 4592300 6344400 2905900 4748700 2903800 1997400 1921600 1122400 1443100 1242300 3795700 1831100 1910000 1184900 4771600 4117300 4532500 4374500 4722400 6221100 3036500 4881700 2919400 2140700 1996600 1189000 1598800 1308400 3703100 1801000 1840700 1134900 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 15861000000 19818 2805;3511;3535;145;3536;3701;3709 18549 37559;37560;37561;37562;37563;37564;37565;37566 30106;30107;30108;30109;30110 30108 5 9606 Homo sapiens 0.06046972902845482 NLLTPLMEK Unmodified 1057.5842 0.58416712 2146 A8KA19;O43592;A0A024RB67 XPOT Exportin-T yes no 0 0 0 1 0 1 61.227 61.227 3 0.018972 18961 20230619_1880_Aki_TMTPro18x_K_F1 67.726 46.262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19819 2146 18550 37567 30111 30111 1 9606 Homo sapiens 0.057678404024500196 NLLTVTSSDEMMK 2 Oxidation (M) 1499.6847 0.68474538 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 2 0 5 0 1 50.377 50.453 3 7.2201E-05 13934 20230619_1885_Aki_TMTPro18x_K_F5 101.61 86.488 66808 54626 59563 72684 79060 69370 78958 71677 79533 75613 84858 81120 78653 70031 87197 86591 82994 79699 61720 50158 61465 71854 80431 70495 79613 73212 81196 76373 86549 81761 80889 73450 88283 86376 79426 75784 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66520000 19820 3758 18551 37568 30112 30112 2444;2445 1 9606 Homo sapiens -0.04510960187508317 NLNEDDTFLVFSK Unmodified 1540.7409 0.74093835 2141 A8K9T8;Q9BYT8;B3KU23;E9PCB6;Q9BQD0 NLN Neurolysin, mitochondrial yes no 0 0 0 6 0 1 62.547 62.598 3 0.00015307 19277 20230619_1886_Aki_TMTPro18x_K_F6 96.591 40.679 200400 211420 187500 175260 188930 248470 238930 269730 247650 243750 277900 210300 232530 227520 274330 273380 259410 262120 185540 193170 191580 181220 197780 246240 238370 273140 252880 246700 281360 215990 240910 236450 277400 273370 248360 249070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90431000 19821 2141 18552 37569 30113 30113 1 9606 Homo sapiens -0.0078024796423505904 NLNGTLHELLR Unmodified 1278.7044 0.70443369 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 1 0 1 51.938 51.938 3 3.6004E-17 15162 20230619_1880_Aki_TMTPro18x_K_F1 225.55 176.81 27159 22060 26067 29660 25904 36267 32403 32574 33352 28362 31491 29485 29171 26242 33793 34241 32302 30995 25104 20258 26604 29404 27152 36057 32324 33419 33825 28933 32298 29798 30075 27587 34202 34100 30912 29478 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54170000 19822 3654 18553 37570 30114 30114 1 9606 Homo sapiens 0.07622964720417258 NLNLEEK Unmodified 858.4447 0.44469675 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;Q59F36;O95654 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 0 0 3.5 0.5 1 1 45.431 45.491 2 0.043965 12090 20230619_1882_Aki_TMTPro18x_K_F3 92.439 27.187 57726 45148 50876 60036 57465 67207 64195 63526 79231 78895 85641 83495 79714 74398 71628 72026 88871 96223 53311 41462 52416 59480 59416 67315 64796 65564 80113 79060 87278 84214 81215 76932 73932 73775 84915 91109 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143900000 19823 1717 18554 37571;37572 30115 30115 1 9606 Homo sapiens 0.009812191094397349 NLNPEDIDQLITISGMVIR Oxidation (M) 2156.1147 0.11471877 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3ITP6;A0A8V8TKP2 MCM4 DNA replication licensing factor MCM4 yes no 0 1 0 8 0 1 64.967 64.986 3 2.613E-07 19958 20230619_1888_Aki_TMTPro18x_K_F8 103.71 87.94 29477 26421 26980 27469 38234 37237 32993 31654 40978 32667 42365 38810 34967 36184 39445 35197 35109 42286 27254 24194 27781 27793 38661 36810 33811 32750 41311 33174 43061 39047 36170 37337 39772 35801 33683 40062 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36838000 19824 471 18555 37573 30116;30117 30117 290 2 9606 Homo sapiens 0.08290599626752737 NLPEEYELK Unmodified 1133.5605 0.56045479 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 3.5 0.5 1 1 52.059 52.104 2 0.00045306 15063 20230619_1882_Aki_TMTPro18x_K_F3 154.81 105 187970 156370 194140 176630 151870 178110 173330 171490 196550 239620 250310 239550 266010 208580 220550 259260 256290 251530 173880 143330 195950 176840 161750 179890 174400 177490 201250 238440 254860 242160 268700 218930 227250 259180 244840 239010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94176000 19825 1853 18556 37574;37575 30118;30119 30118 2 9606 Homo sapiens -0.0009830183039412077 NLPEGVAMEVTK Unmodified 1286.654 0.6540376 741 B4DP77;A0A024RD03;P82664 MRPS10 28S ribosomal protein S10, mitochondrial yes no 0 0 0 5.5 0.5 1 1 54.563 54.64 3 0.011365 15711 20230619_1885_Aki_TMTPro18x_K_F5 64.104 31.85 59979 52237 56333 56313 54237 70668 62653 62319 82785 66322 62783 68786 71254 60981 61410 84883 71569 80348 55456 47854 57512 56745 56856 70168 63296 64342 82368 66934 65760 69472 72012 64416 63315 84585 68439 76331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54761000 19826 741 18557 37576;37577 30120;30121 30120 2 9606 Homo sapiens 0.02217674280382198 NLPFDFTWK Unmodified 1166.576 0.57604528 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7;M0QY96 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 2.5 0.5 1 1 63.603 63.623 2 0.00013932 19948 20230619_1882_Aki_TMTPro18x_K_F3 172.28 91.069 913980 818600 873070 905800 857830 1090900 1015500 1069200 1127600 1148700 1010400 959440 1183100 983200 910100 1185200 1047000 1153000 845320 750020 890520 910370 897730 1088400 1018400 1095400 1138400 1151000 1049100 983680 1188900 1024400 939370 1185200 1001200 1095000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 782050000 19827 3631 18558 37578;37579 30122;30123;30124 30124 3 9606 Homo sapiens -0.0005797052269826963 NLPFLIK Unmodified 843.52182 0.52182486 4182 Q86TB9-2;Q86TB9-4;Q86TB9;B3KXN0 PATL1 Protein PAT1 homolog 1 yes no 0 0 0 4.5 0.5 1 1 61.723 61.749 3 0.026521 19011 20230619_1883_Aki_TMTPro18x_K_F4 70.912 26.465 18412 17767 20041 22752 17494 22120 20636 21587 31317 21008 16377 16094 16000 12402 17950 20389 19696 17976 17057 16297 20204 22556 18494 22396 20950 22076 30679 21133 17490 16438 16438 13345 18328 20217 18816 17105 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30501000 19828 4182 18559 37580;37581 30125 30125 1 9606 Homo sapiens 0.09380482116421263 NLPFSVENK Unmodified 1046.5397 0.53965977 2842 D6R9Z7;Q71U45;P15954 COX7C Cytochrome c oxidase subunit 7C, mitochondrial yes no 0 0 0 7.5 0.5 1 1 53.424 53.495 2 4.4923E-06 15027 20230619_1888_Aki_TMTPro18x_K_F8 204.07 105.07 212900 189400 214760 223050 246520 257130 314150 304180 314510 211340 192080 179890 268150 196150 147290 281400 264470 230560 196980 173640 218600 223050 255130 258520 312650 304960 315280 217750 205980 184930 265490 206420 159090 278140 251680 219650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313830000 19829 2842 18560 37582;37583 30126 30126 1 9606 Homo sapiens 0.01825152580613576 NLPGLVQEGEPFSEEATLFTK Unmodified 2305.1478 0.14779303 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299;H7C597 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 0 5.5 0.5 1 1 63.929 63.975 4 0.016475 19771 20230619_1885_Aki_TMTPro18x_K_F5 53.059 41.789 36540 32763 39658 42116 39752 44840 38849 39100 48838 45332 48381 46942 45221 44134 46928 53132 50776 58723 33832 30062 40040 41792 41274 45003 39548 40516 49164 45547 49518 47505 46379 46079 47941 53540 48600 55687 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 288580000 19830 1229 18561 37584;37585 30127 30127 1 9606 Homo sapiens 0.047425049504454364 NLPIENTTDCLSTMASVCR Oxidation (M) 2196.9813 0.98133811 572 Q9NUQ9;A0A024R9G4;A0A8V8TMP7;Q68D08;Q9NUQ9-2;Q3ZTR9 FAM49B;DKFZp686B04128;BM009 Protein FAM49B yes no 0 1 0 6 0 1 52.483 52.561 3 9.0913E-11 15057 20230619_1886_Aki_TMTPro18x_K_F6 138.46 123.85 24201 21885 25105 29688 31524 26774 26729 28212 27056 28991 34902 30370 26309 27647 28225 31921 37000 33959 22400 20092 25538 29294 32037 27348 27257 28749 27861 29291 35036 30701 27258 28814 29171 32113 35295 32244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77262000 19831 572 18562 37586 30128 30128 338 1 9606 Homo sapiens -0.06927330812959553 NLPIENTTDCLSTMASVCR Unmodified 2180.9864 0.98642349 572 Q9NUQ9;A0A024R9G4;A0A8V8TMP7;Q68D08;Q9NUQ9-2;Q3ZTR9 FAM49B;DKFZp686B04128;BM009 Protein FAM49B yes no 0 0 0 7.5 0.5 1 1 59.295 59.341 3 1.4111000000000001E-24 17463 20230619_1887_Aki_TMTPro18x_K_F7 197.45 188.64 23057 18225 23479 22555 19737 18392 22528 21730 18236 25685 25067 26477 29165 22742 23200 28022 24781 27709 21319 16724 23748 22379 20829 19004 22440 22084 19132 25747 25586 26712 29333 23870 23811 28043 23715 26310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 836020000 19832 572 18562 37587;37588 30129 30129 1 9606 Homo sapiens -0.05683026950327985 NLPIYSEEIVEMYK Unmodified 1726.8488 0.84877424 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5;B4E3S1;A0A8I5KYI1;Q5BKV1;A0A8I5KU92 MYH9 Myosin-9 yes no 0 0 0 5.5 1.12 1 1 1 1 63.408 63.442 3 4.0799E-05 19682 20230619_1886_Aki_TMTPro18x_K_F6 103.85 81.699 285940 243620 311110 339760 255490 324780 340780 336740 355230 461210 446930 474740 557920 411210 392130 564170 496170 575800 264660 223780 313360 334950 272270 329670 339260 346560 365270 459610 459120 479200 557610 434690 408390 564550 474270 546480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 714580000 19833 148 18563 37589;37590;37591;37592 30130;30131 30131 2 9606 Homo sapiens 0.014423805748492668 NLPIYSENIIEMYR Oxidation (M) 1769.8658 0.86582129 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4;G1UI33;A0A8I5KSC2;A0A8I5KTT7 MYH10 Myosin-10 yes no 0 1 0 7 0 1 61.517 61.556 3 4.11E-07 18498 20230619_1887_Aki_TMTPro18x_K_F7 134.88 121.9 76683 69362 77056 75642 64695 78070 96582 69437 78094 87388 86010 81083 104970 84774 87254 97453 93806 97895 70956 63541 78079 75940 69009 78581 94916 72103 80969 87174 88686 82754 105650 88031 89454 97728 89718 92962 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167790000 19834 3549 18564 37593 30132 30132 2215 1 9606 Homo sapiens 0.011683011806780996 NLPLPPPPPPR Unmodified 1193.6921 0.69207809 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;B3KU16 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 2.33 0.745 1 2 3 49.638 49.696 3 0.00076922 14500 20230619_1881_Aki_TMTPro18x_K_F2 93.096 47.267 245290 178620 207960 223190 214940 266680 252870 239980 337280 241080 242050 258010 266720 230720 241600 280220 264120 280580 226380 163980 214610 222290 224190 265660 255240 247070 334740 244350 254000 260250 270330 241490 247580 280710 252610 266430 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1218800000 19835 1865 18565 37594;37595;37596;37597;37598;37599 30133;30134;30135;30136;30137 30134 5 9606 Homo sapiens 0.10297973048022868 NLPPEEQMISALPDIK Oxidation (M) 1809.9183 0.91825079 2230 Q6IAU5;B2R665;O15355;B4DDC8;B3KXL8;Q96IN7;Q59GB2 PPM1G Protein phosphatase 1G yes no 0 1 0 5 0.816 1 1 1 58.573 58.603 3 0.00041629 17367 20230619_1885_Aki_TMTPro18x_K_F5 76.82 57.497 42133 34816 37672 40100 35739 40798 40728 41140 47556 38590 40134 35082 44495 33218 46737 41542 45219 42338 38927 31920 38626 40084 37438 41215 40992 41939 47742 39048 41698 35742 45349 34797 47370 41673 43260 40215 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 400390000 19836 2230 18566 37600;37601;37602 30138;30139 30138 1391 2 9606 Homo sapiens 0.04568839523631141 NLPPEEQMISALPDIK Unmodified 1793.9233 0.92333617 2230 Q6IAU5;B2R665;O15355;B4DDC8;B3KXL8;Q96IN7;Q59GB2 PPM1G Protein phosphatase 1G yes no 0 0 0 5.5 0.5 1 1 62.624 62.675 3 3.892E-06 19289 20230619_1886_Aki_TMTPro18x_K_F6 114.27 92.402 417700 317850 469260 470380 368160 480630 471350 424610 519070 573900 550750 512390 620930 508900 462390 488060 547720 581030 386460 292280 470990 462470 393620 483650 470870 441830 527710 570190 566220 522630 623810 524330 477820 495980 523460 550760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 818950000 19837 2230 18566 37603;37604 30140;30141 30141 2 9606 Homo sapiens 0.05813143386262709 NLPPSGAVPVTGIPPHVVK Unmodified 1878.0727 0.072718018 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7I2V5M7;A0A7P0P2U7;A0A7I2YQU8;A0A7I2V651;B7Z8K4;A0A7I2YQM1;A0A7I2V548;A0A7I2V4D8 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 3.33 0.471 2 1 52.557 52.605 3 3.936E-07 15629 20230619_1882_Aki_TMTPro18x_K_F3 100.92 82.086 110530 90971 107120 111920 104330 133660 128680 114990 131130 140040 135080 125650 149340 123500 129900 156930 144320 141470 102180 83460 109130 111580 109370 133040 128400 119450 133680 139760 138970 128200 151030 129240 133380 156220 137930 134540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 304710000 19838 3846 18567 37605;37606;37607 30142;30143 30143 2 9606 Homo sapiens 0.16880456791136567 NLPSLFK Unmodified 817.46979 0.46978929 2082 A8K5Y7;Q9HAV4;B3KPQ5 XPO5 Exportin-5 yes no 0 0 0 3.5 0.5 1 1 57.865 57.868 2 0.0095486 17418 20230619_1883_Aki_TMTPro18x_K_F4 119.17 65.619 277360 230870 230310 263250 245640 320000 260720 265770 328170 209800 184730 168360 212440 173260 227890 256850 223520 210740 256130 211650 238350 263920 254970 317930 264020 273750 324520 214080 197470 173230 216720 182990 231380 254100 213820 200700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100330000 19839 2082 18568 37608;37609 30144;30145 30145 2 9606 Homo sapiens 0.05375318702670029 NLPVPVYLRPLDEK Unmodified 1651.9297 0.92974218 3273 O60271;O60271-4;O60271-2;O60271-3;O60271-5;O60271-9;B4DS36;Q5JB53 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 1 2 0 1 59.292 59.304 3 1.4155E-08 18322 20230619_1881_Aki_TMTPro18x_K_F2 153.79 128.94 159100 134840 145660 161490 122600 137270 151850 141370 155970 188740 178850 181110 208040 181280 184350 223500 211500 224410 147050 123660 148830 160600 129980 140790 151590 145490 159760 187940 183730 184250 210320 189230 189600 223850 202190 213090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35113000 19840 3273 18569 37610 30146 30146 1 9606 Homo sapiens 0.12985449399911886 NLPYVYIPSK Unmodified 1192.6492 0.64921022 4617 Q9NX24;D6RC52;D6RCB9 NHP2 H/ACA ribonucleoprotein complex subunit 2 yes no 0 0 0 3.5 0.5 1 1 59.87 59.886 2 0.00042735 18260 20230619_1883_Aki_TMTPro18x_K_F4 145.9 122.48 85798 77990 79468 97597 79790 82356 91830 97063 95206 89360 87485 82532 86712 77447 101710 100880 100710 96839 79342 71538 81362 96750 83131 84791 92019 97950 96493 90500 90108 83982 89271 81284 103100 100780 96339 92035 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136970000 19841 4617 18570 37611;37612 30147;30148 30148 2 9606 Homo sapiens 0.06059158199923331 NLQCLVIDEADR Unmodified 1444.698 0.69802768 4606 Q9NVP1;Q4ZG72;Q8N254;H7C452 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 0 0 2.5 0.5 1 1 55.654 55.685 2 6.0192E-13 16857 20230619_1881_Aki_TMTPro18x_K_F2 209.97 176.59 120040 88776 98266 125660 107220 118790 111840 120360 138140 129140 133930 119900 149850 113280 112570 160720 126370 144200 110760 81603 101930 123710 110880 120650 113340 123090 139090 129780 138160 122050 150570 119630 116160 159660 120900 137070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 315180000 19842 4606 18571 37613;37614 30149;30150 30149 2 9606 Homo sapiens -0.006533412933094951 NLQDAMQVCR Oxidation (M) 1249.5543 0.55434033 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 1 0 5.33 1.25 1 1 1 38.122 38.189 2 0.0044365 8424 20230619_1885_Aki_TMTPro18x_K_F5 88.392 80.995 221130 167910 201080 226500 235580 237590 238250 231510 264730 232880 243690 198300 225460 193890 220430 258770 231230 207530 204220 154240 206580 224020 241920 239300 240860 236990 267290 234320 249930 203000 230470 203520 225040 256040 220970 197740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 419310000 19843 2435 18572 37615;37616;37617 30151;30152;30153 30152 1502 3 9606 Homo sapiens -0.06045466605223737 NLQDAMQVCR Unmodified 1233.5594 0.55942571 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 6.5 0.5 1 1 45.513 45.6 2 8.8274E-14 11919 20230619_1886_Aki_TMTPro18x_K_F6 232.83 208.68 536790 420790 456630 462580 434500 523680 526670 497620 608340 498160 464000 430110 548720 426570 463670 562920 534490 458070 495610 385700 470300 464730 456170 524330 528090 510220 609190 501660 486320 439940 553160 447440 477410 557370 510190 436470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1492099999.9999998 19844 2435 18572 37618;37619 30154;30155 30154 2 9606 Homo sapiens -0.04801162742592169 NLQDGQISDTGDLGEDIASN Unmodified 2060.9134 0.913436 4170;3047 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;H0YHT2;Q68D13;H0YI78 KIF21A;DKFZp779C159 Kinesin-like protein KIF21A no no 0 0 0 1 0 1 58.268 58.268 3 0.010945 17814 20230619_1880_Aki_TMTPro18x_K_F1 55.383 48.344 24532 30450 35373 30782 33842 34944 33647 29094 29633 31274 30693 32471 28245 26425 32278 29904 28677 37186 22840 27851 34977 31139 35202 34913 33826 30204 30478 31524 31363 32690 29107 27644 32543 30409 27532 35211 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 273610000 19845 4170;3047 18573 37620 30156 30156 1 9606 Homo sapiens -0.07458417876068779 NLQEAEEWYK Unmodified 1308.5986 0.59863121 3414;2433 B3KWQ6;P41219;P41219-2;F8W835;H7C5W5;P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 PRPH;VIM;HEL113 Peripherin;Vimentin no no 0 0 0 4.1 1.58 2 2 2 2 1 1 55.616 55.657 2;3 2.5866E-26 16441 20230619_1883_Aki_TMTPro18x_K_F4 278.44 228.4 1495200 1236600 1424200 1168100 2071600 2664700 1790100 1941500 2175500 2312400 2065600 2211500 2450800 2231900 2110700 2381400 2023500 2384000 1382200 1131900 1461500 1205600 2096800 2563800 1833200 2040700 2192700 2314900 2142200 2249500 2473600 2309100 2149100 2390300 1939400 2263000 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 16811000000 19846 2433;3414 18574 37621;37622;37623;37624;37625;37626;37627;37628;37629;37630 30157;30158;30159;30160 30159 4 9606 Homo sapiens -0.04332415915723686 NLQEEIDALESR Unmodified 1415.6892 0.68923713 4575 Q9NQP4;E9PQY2 PFDN4 Prefoldin subunit 4 yes no 0 0 0 2 0.816 1 1 1 60.377 60.391 2;3 9.4283E-26 18762 20230619_1881_Aki_TMTPro18x_K_F2 178.52 151.19 94182 74626 88158 92280 75215 87425 86340 83508 108740 100480 89366 95306 104300 92889 94844 124870 111430 118870 87024 68478 89882 91688 79535 88686 87117 86068 108770 100520 93299 96930 105590 97572 97695 124540 106510 112940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 319570000 19847 4575 18575 37631;37632;37633 30161;30162;30163 30162 3 9606 Homo sapiens -0.001979916581149155 NLQEGNLER Unmodified 1071.5309 0.530886 3852 Q13445;K7EIN4;K7EQ63 TMED1 Transmembrane emp24 domain-containing protein 1 yes no 0 0 0 2 0 1 37.06 37.12 2 4.1406E-06 8542 20230619_1881_Aki_TMTPro18x_K_F2 185.81 133.41 101650 81826 86914 100370 125250 132010 124090 132100 188360 149990 162650 177130 166830 150940 141870 173110 210160 183900 93869 75073 90181 100250 127140 131100 127110 135360 187110 151540 168320 177660 169110 157690 148630 174120 200240 174650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111210000 19848 3852 18576 37634 30164 30164 1 9606 Homo sapiens -0.002018210558617284 NLQEGQVTDPR Unmodified 1255.6157 0.61567826 2328 D5MQE1;B2RE59;Q92600;B4DJE1;Q92600-2 RQCD1 Cell differentiation protein RCD1 homolog yes no 0 0 0 3 0 1 37.618 37.671 2 1.7855E-08 8611 20230619_1882_Aki_TMTPro18x_K_F3 174.98 124.37 31087 27054 25194 27951 31045 33928 29269 26186 46326 34065 37831 35688 37097 32281 34168 41524 42790 38355 28712 24775 26185 28237 31784 33695 30122 27508 45850 34098 39159 36060 37765 33891 35311 41381 40827 36480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43060000 19849 2328 18577 37635 30165 30165 1 9606 Homo sapiens -0.0019049530990287167 NLQEIQQAGER Unmodified 1284.6422 0.64222736 4222 Q8N1F7;A8K897;H3BVG0;H3BV11;H3BRI8;H3BM93 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 3.5 0.5 1 1 42.176 42.229 2 8.4267E-12 10560 20230619_1882_Aki_TMTPro18x_K_F3 197.94 71.392 146840 120560 127850 141280 161180 186200 155730 155070 196940 172380 190450 188800 194980 158700 164050 210360 202780 184420 135640 110560 132040 141550 164820 184160 158590 161010 197990 173870 195850 189980 197380 167400 169750 208980 193520 175500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 213200000 19850 4222 18578 37636;37637 30166;30167 30166 2 9606 Homo sapiens 0.011291935814369936 NLQEQTVQLQSELSR Unmodified 1771.9064 0.90644055 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 5.5 0.5 1 1 53.87 53.944 3 2.4771E-25 15438 20230619_1885_Aki_TMTPro18x_K_F5 228.97 209.65 135770 102220 123880 146950 116070 143460 141770 150030 164630 157190 154870 164400 156580 144020 151290 169450 166140 184500 125390 93971 126870 144630 122040 145400 142200 153010 166030 158690 159510 165860 159600 150550 154870 170660 158940 175020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 713330000 19851 3440 18579 37638;37639 30168;30169 30168 2 9606 Homo sapiens 0.05136358824688614 NLQEVLGEEK Unmodified 1157.5928 0.59281755 1102 A0A0S2Z4R1;P54577;A0A0C4DGZ5;A0A6Q8PFX4;A0A6Q8PFC1;A0A6Q8PF15;A0A0S2Z4P3 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 4 0 1 54.33 54.345 3 3.3106E-08 15941 20230619_1883_Aki_TMTPro18x_K_F4 156.58 110.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19852 1102 18580 37640 30170 30170 1 9606 Homo sapiens 0.02032485572613041 NLQGFLEQPK Unmodified 1172.619 0.61897272 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2 UBR4 E3 ubiquitin-protein ligase UBR4 no no 0 0 0 8 0 2 56.051 56.113 2;3 0.0017976 16215 20230619_1888_Aki_TMTPro18x_K_F8 103.7 68.892 75721 80792 79582 93087 86268 96130 89211 92709 104950 81744 85247 73076 90612 71800 90935 94908 87517 88764 70179 74011 80705 93040 89168 96913 90272 94658 105180 82988 88562 74633 92292 75357 92297 94648 83778 84369 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72447000 19853 4061 18581 37641;37642 30171;30172 30172 2 9606 Homo sapiens 0.0395679953473973 NLQLFMENK Unmodified 1135.5696 0.56957969 2724 P11387;B9EG90;A0A7P0T852;Q969P6;Q969P6-2;E5KMK7;E5KMK6;E5KMK5;B4DYD2;B7Z9E8;E5RIC7;B4E061 TOP1;TOP1MT DNA topoisomerase 1;DNA topoisomerase I, mitochondrial yes no 0 0 0 4.5 3.5 1 1 59.019 59.04 3 0.00021173 18122 20230619_1880_Aki_TMTPro18x_K_F1 124.74 104.08 208920 167000 200050 220880 169500 239510 220510 213880 270730 243180 240950 234450 261140 227720 245460 277240 259250 289470 193090 153340 203700 218820 180350 240030 220930 221090 271710 244050 249470 238260 265190 237770 250820 278390 248120 274700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 264980000 19854 2724 18582 37643;37644 30173;30174 30173 2 9606 Homo sapiens 0.007217682543114279 NLQLLMDR Unmodified 1001.5328 0.53280025 2400 Q5BKY2;Q6IB98;Q53HR0;Q53HG0;B3KS98;O15372;E5RJT0 EIF3H;EIF3S3 Eukaryotic translation initiation factor 3 subunit H yes no 0 0 0 8 0 1 54.056 54.127 2 0.0088109 15325 20230619_1888_Aki_TMTPro18x_K_F8 96.668 59.68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19855 2400 18583 37645 30175 30175 1 9606 Homo sapiens 0.03209516428398729 NLQMWEEMK Unmodified 1207.5366 0.536565 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 6 0 1 59.172 59.237 3 0.0028753 17800 20230619_1886_Aki_TMTPro18x_K_F6 84.817 72.951 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19856 3402 18584 37646 30176 30176 1 9606 Homo sapiens -0.05890181860058874 NLQMWEEMKK Oxidation (M) 1351.6264 0.62644264 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 1 1 8 0 1 49.398 49.471 3 0.075763 13298 20230619_1888_Aki_TMTPro18x_K_F8 41.283 23.795 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19857 3402 18585 37647 30177 30177 2018 1 9606 Homo sapiens -0.035305522515045595 NLQQHEHSALR Unmodified 1331.6694 0.66944516 2823 D3DT93;O00463-3;O00463;O00463-2 TRAF5 TNF receptor-associated factor 5 yes no 0 0 0 5 0 1 26.684 26.755 4 0.0083308 4655 20230619_1885_Aki_TMTPro18x_K_F5 57.019 43.056 7825.4 5580.2 6549.8 7381.7 8739.6 7372.2 7284.1 7531.2 7610.1 9589.2 8636.9 9789.4 7365.2 6504.3 9198.7 8146 8864.5 10222 7220.3 5126.2 6793.6 7305.6 8850.4 7465.4 7441.7 7737.7 7788.6 9579.3 8769.6 9806.7 7645.4 6907.1 9297.9 8278.5 8494.1 9682.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2946800 19858 2823 18586 37648 30178 30178 1 9606 Homo sapiens 0.016877219124580733 NLQSAEEWYK Unmodified 1266.5881 0.58806652 3949 Q16352;Q59EM6 INA Alpha-internexin yes no 0 0 0 6 0 1 53.763 53.841 3 0.00026614 15556 20230619_1886_Aki_TMTPro18x_K_F6 114.86 88.189 92010 87697 97334 73922 32006 33149 36913 42334 41153 96127 84587 89139 95325 76492 90774 98584 99213 112930 85208 80161 97250 75417 38533 36961 37277 44100 43659 93936 85252 90320 96686 80551 92897 99481 94940 107060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143410000 19859 3949 18587 37649 30179 30179 1 9606 Homo sapiens -0.0345639857016522 NLQSDVLMTVVK Oxidation (M) 1361.7225 0.72245152 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5;E7EWK3 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 1 0 8 0 1 58.28 58.327 3 0.047103 17140 20230619_1888_Aki_TMTPro18x_K_F8 42.789 21.157 18748 21711 17893 20064 20180 28985 24615 23671 36755 15264 17516 17710 14397 16972 18493 15362 16921 16046 17375 19847 18308 20523 20975 28504 24910 24324 35906 16004 18747 17847 15028 17423 18629 15517 16199 15236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95445000 19860 4503 18588 37650 30180 30180 2797 1 9606 Homo sapiens 0.0560591886023758 NLQSFGTEEPAYSTR Unmodified 1698.7849 0.78492843 3351 O95251-2;O95251-4;O95251;A0A6Q8PHH2 KAT7 Histone acetyltransferase KAT7 yes no 0 0 0 4.5 0.5 1 1 48.481 48.538 2 1.2701000000000001E-25 13307 20230619_1883_Aki_TMTPro18x_K_F4 285.54 224.19 19280 13933 16371 20129 15229 20019 20500 17212 18067 23807 26007 27213 26376 21745 23794 30230 28689 26771 17793 12811 16884 19804 16072 20175 20289 17971 18877 23799 26335 27291 26782 23053 24547 30030 27389 25470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19963000 19861 3351 18589 37651;37652 30181 30181 1 9606 Homo sapiens -0.03651263537835803 NLQSVVLSK Unmodified 986.57605 0.57604528 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;V9H023;V9H0D5;V9H0B2;V9H015;V9H062;Q0ZAJ2 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 3 0 1 52.667 52.726 3 0.016744 15403 20230619_1882_Aki_TMTPro18x_K_F3 65.719 33.305 273310 218590 269960 284870 238850 294370 291210 276860 346680 260560 291890 302510 324020 252360 303970 353450 331300 306520 252660 200680 274180 282340 252270 296430 292300 283740 347540 265650 303560 303700 328630 267300 311220 350790 316550 291720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74122000 19862 3585 18590 37653 30182 30182 1 9606 Homo sapiens 0.08222029477349224 NLQTCMEVLEALYDGSLGDCK Unmodified 2415.0756 0.075632423 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 7 0 1 66.099 66.123 3 3.8418E-08 20577 20230619_1887_Aki_TMTPro18x_K_F7 109.85 95.69 9504.1 7336.1 6906.9 10408 7402.6 9425.5 7722.9 7218.6 6734.7 10855 8707.4 12290 10096 8360.5 7813.5 13964 11037 11329 8765.2 6742.3 7261.2 10235 7672.1 9551 7740.5 7632.6 7019.8 10809 8925.2 12268 10154 9044.7 8198 13776 10531 10787 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18252000 19863 2297 18591 37654 30183 30183 1 9606 Homo sapiens -0.0753023678144018 NLQTVNVDEN Unmodified 1144.536 0.53603095 2204 B2R4C1;P62899;Q76N53 RPL31 60S ribosomal protein L31 yes no 0 0 0 2 0.816 1 1 1 46.534 46.587 2 8.4791E-10 12820 20230619_1881_Aki_TMTPro18x_K_F2 211.56 174.4 392590 299820 330360 357420 409070 450750 392380 406540 535830 500920 488560 483740 531100 434990 427990 493080 597490 548320 362390 275050 342100 357450 418650 447740 400990 420740 535990 500830 505160 490110 535880 453610 446690 497470 569690 520390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2268600000 19864 2204 18592 37655;37656;37657 30184;30185;30186 30185 3 9606 Homo sapiens -0.030455619838903658 NLQYYDISAK Unmodified 1213.5979 0.59790293 2668 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 RAN GTP-binding nuclear protein Ran yes no 0 0 0 6.17 2.41 1 1 2 2 52.522 52.584 2;3 4.5053E-26 14610 20230619_1888_Aki_TMTPro18x_K_F8 268.69 183.53 1007200 819550 923900 889700 876880 1060900 987500 971710 1035100 1206000 1274400 1272500 1387500 1161400 1183600 1404300 1357100 1291200 930640 751030 944630 895450 918370 1057900 991200 1005100 1062200 1208100 1301100 1285200 1402700 1214300 1217900 1400400 1296300 1227800 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 14950000000 19865 2668 18593 37658;37659;37660;37661;37662;37663 30187;30188;30189;30190 30189 4 9606 Homo sapiens -0.0003521056476074591 NLRDIDEVSSLLR Unmodified 1528.8209 0.82092001 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 1 6.5 0.5 1 1 57.334 57.398 3 6.5108E-22 16726 20230619_1887_Aki_TMTPro18x_K_F7 239.31 158.79 125600 176030 128070 106860 148650 113340 114200 133650 109140 128640 116380 84774 114550 85388 129320 132320 118860 90547 116670 160420 129970 114040 151410 115000 117130 134890 111960 128860 118830 88239 117570 90576 130680 129880 113630 86548 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 420400000 19866 3621 18594 37664;37665 30191 30191 1 9606 Homo sapiens 0.07766238429667283 NLREDGEK Unmodified 959.46722 0.46722311 3415;3738;3385 P04899-4;P04899;Q96C71;Q93020;A0A3B3IRK0;F8WE78;O43383;A0A3B3ITG4;A0A3B3IU77;A0A3B3ITX3;A0A3B3IS42;P08754;P63096;A0A3B3IUA8 GNAI2;WUGSC:H_LUCA16.1;GNAI1;GNAI3 Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-1 no no 0 0 1 2.5 0.5 1 1 32.602 32.668 3 0.0029394 6752 20230619_1881_Aki_TMTPro18x_K_F2 106.93 69.861 181520 70747 271320 256390 400970 313760 282260 377570 225340 156470 346870 390570 201390 257740 324160 78587 330970 276490 167980 66439 269820 244160 401590 314240 290180 375190 237130 176860 344330 381040 216500 260460 326430 93821 316220 260710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98841000 19867 3385;3415;3738 18595 37666;37667 30192;30193 30192 2 9606 Homo sapiens -0.014131814929442044 NLRPGDSQTAAQAR Unmodified 1483.7492 0.74915205 2715 B7ZMD6;Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes no 0 0 1 7 0.816 1 1 1 29.794 29.845 3 1.9862E-08 5761 20230619_1886_Aki_TMTPro18x_K_F6 130.47 101.49 20933 17886 21435 23619 22382 26028 23282 23571 33099 22146 26002 21635 28191 22223 23938 27629 31113 23463 19366 16419 21761 23406 23224 26074 23723 24214 32841 22473 27071 22040 28500 23193 24829 27436 29646 22357 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 69441000 19868 2715 18596 37668;37669;37670 30194;30195 30194 2 9606 Homo sapiens 0.026627437958268274 NLSDIDLMAPQPGV Oxidation (M) 1484.7181 0.71809442 4325 Q96B49 TOMM6 Mitochondrial import receptor subunit TOM6 homolog yes yes 0 1 0 4 0 1 62.163 62.168 2 0.0026338 19252 20230619_1883_Aki_TMTPro18x_K_F4 81.335 62.064 28468 25379 27006 28516 33043 33013 32138 30415 36515 39137 33612 33080 36185 30165 36366 34936 32525 45021 26327 23257 27651 28606 33799 33002 32586 31481 36875 38901 34740 33743 36847 31496 36761 35595 31243 42608 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37908000 19869 4325 18597 37671 30196 30196 2732 1 9606 Homo sapiens -0.00487590353327505 NLSDIDLMAPQPGV Unmodified 1468.7232 0.7231798 4325 Q96B49 TOMM6 Mitochondrial import receptor subunit TOM6 homolog yes yes 0 0 0 3.5 0.5 1 1 63.985 64.005 3 1.7846E-05 20011 20230619_1883_Aki_TMTPro18x_K_F4 113.99 93.324 9176.1 9050.6 11398 12464 8221.6 13098 10708 9422.6 11286 13022 12281 15219 16352 13162 13962 16960 16547 17163 8512.8 8308.1 11358 12308 8882.8 13101 10675 9986.5 11517 13035 12753 15274 16443 13848 14398 16984 15811 16298 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34352000 19870 4325 18597 37672;37673 30197 30197 1 9606 Homo sapiens 0.007567135093040633 NLSDVATK Unmodified 846.4447 0.44469675 173 A0A0S2Z487;A0A024R1X8;P14923;Q7KZ86 JUP Junction plakoglobin yes no 0 0 0 6 0.816 1 1 1 43.745 43.83 2 0.002618 11156 20230619_1886_Aki_TMTPro18x_K_F6 123.86 48.751 112650 69973 119310 146230 172450 173510 143220 146490 165980 137770 180110 178560 169350 146020 138170 99835 210530 173560 104060 64722 121590 141560 174010 172660 146810 151320 168260 141000 183590 178190 171760 149340 144800 105340 200480 164210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92530000 19871 173 18598 37674;37675;37676 30198 30198 1 9606 Homo sapiens 0.015332191094216796 NLSEVPQCVWR Unmodified 1386.6714 0.671419 1188 A0A140VJN3;Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes no 0 0 0 8 0 1 53.052 53.127 2 0.00010605 14925 20230619_1888_Aki_TMTPro18x_K_F8 164.66 148.77 84462 65136 73344 73347 71865 86263 75216 81835 83696 78679 76626 65973 87857 69773 75838 89072 89865 84695 77987 59722 75408 73597 74946 86144 75947 83789 84525 79317 79370 67759 88724 72904 78172 88913 85811 80509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39531000 19872 1188 18599 37677 30199 30199 1 9606 Homo sapiens -0.006449853939557215 NLSGQPNFPCR Unmodified 1288.5983 0.59825406 10 Q96JZ5;A0A024QYS2;Q9HD45;Q8WUB5;Q8NCC4;B4DN13;Q96K55 SMBP;TM9SF3 Transmembrane 9 superfamily member 3 yes no 0 0 0 1.5 0.5 1 1 43.025 43.066 2 0.00019301 11260 20230619_1881_Aki_TMTPro18x_K_F2 129.85 103.47 102900 80278 87883 90718 93199 107050 113720 109420 124240 99088 100020 91971 99224 82967 105960 109480 122880 104310 95007 73605 90641 91010 97002 107060 113760 111330 124930 100520 103700 93457 101640 87292 108570 109300 117280 99199 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 70329000 19873 10 18600 37678;37679 30200;30201 30201 2 9606 Homo sapiens -0.03450114116571967 NLSLEAIQLCDRDGNK Unmodified 1844.9051 0.90506034 42 A0A024QZK4;Q96FC7 PHYHIPL Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 1 6.5 0.5 1 1 52.695 52.769 3 7.4209E-15 14816 20230619_1887_Aki_TMTPro18x_K_F7 188.6 157.21 222920 218810 227660 186410 77399 86145 172460 185080 162510 248800 218520 190270 216830 173040 202630 264390 199790 206380 206420 200010 228330 190070 94760 97249 168380 183960 168650 245940 221320 195350 220560 183910 206500 260780 191230 196620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 483110000 19874 42 18601 37680;37681 30202;30203 30203 2 9606 Homo sapiens 0.01640401464237584 NLSPGAVESDVR Unmodified 1242.6204 0.62042929 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3ITV3;A0A3B3ISK1;A0A3B3IU78 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 2.5 0.5 1 1 44.047 44.123 2 1.2492E-12 11398 20230619_1882_Aki_TMTPro18x_K_F3 200.67 169.59 145100 123840 129930 143970 147560 164440 163100 160190 186470 191120 190770 187710 209970 182860 172170 209260 227520 219550 134090 113540 133610 144030 152360 164660 164250 164750 188890 191410 196310 190570 211980 190200 178990 210340 217100 208450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 346080000 19875 3647 18602 37682;37683 30204;30205 30205 2 9606 Homo sapiens 0.008823888328379326 NLSPVVSNELLEQAFSQFGPVEK Unmodified 2531.2908 0.29076888 2614 B4DWI8;Q8WXF1;A0A024RDP4;Q8WXF1-2;X6RDA4 PSPC1 Paraspeckle component 1 yes no 0 0 0 1.5 0.5 1 1 65.677 65.681 3 2.4397E-13 20795 20230619_1880_Aki_TMTPro18x_K_F1 132.48 117.39 8201.2 6646.5 10344 10299 8978.2 9850.5 8612.9 10039 9803.6 11072 10188 10410 14835 9103.5 9786.9 13689 12778 11599 7599.4 6113.9 10307 10092 9419.1 9995.6 8753.9 10268 9950.7 11110 10635 10559 14732 9690.1 10226 13553 12189 11043 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17185000 19876 2614 18603 37684;37685 30206;30207 30206 2 9606 Homo sapiens 0.08637512341692855 NLSPYVSNELLEEAFSQFGPIER Unmodified 2638.2915 0.29149716 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 6 0.816 1 1 1 66.388 66.424 3 2.1458E-89 20668 20230619_1887_Aki_TMTPro18x_K_F7 339.22 288.36 37987 33574 31083 37008 31003 33040 36796 34711 32733 39255 42748 32996 37463 28795 34988 48543 36654 36280 35090 30762 32183 37049 32355 33769 36649 35480 33993 39218 43092 33703 38259 30886 35792 47734 35052 34591 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 349030000 19877 1450 18604 37686;37687;37688 30208;30209 30209 2 9606 Homo sapiens 0.0378830699082755 NLSSDEATNPISR Unmodified 1402.6688 0.66883604 4166 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 yes yes 0 0 0 3 0 1 41.482 41.544 2 3.7247E-12 10254 20230619_1882_Aki_TMTPro18x_K_F3 188.29 141.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19878 4166 18605 37689 30210 30210 1 9606 Homo sapiens -0.016391623179060844 NLSSNEAISLEEIR Unmodified 1573.7948 0.79476484 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2.5 0.5 2 2 53.592 53.633 2;3 1.6341999999999998E-28 15734 20230619_1882_Aki_TMTPro18x_K_F3 296.21 224.99 526900 458910 497910 504170 508460 518110 577340 507200 579290 628250 645020 653900 672580 560930 595990 668070 607190 664760 487180 420480 508370 505870 528740 522940 578170 522400 592970 629130 659980 659430 681760 587390 608440 669270 581250 631220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1543899999.9999998 19879 3758 18606 37690;37691;37692;37693 30211;30212 30212 2 9606 Homo sapiens 0.030819244675285518 NLSSQLQTGR Unmodified 1102.5731 0.57308516 4594 Q9NU22;Q6AI22 MDN1;DKFZp686H16106 Midasin yes no 0 0 0 4.5 3.5 1 1 38.908 38.902 2 0.0012321 9623 20230619_1880_Aki_TMTPro18x_K_F1 110.39 81.3 68816 56020 67561 71218 72499 82770 72832 70595 84498 82354 92334 87324 86722 80213 80859 95555 109160 93325 63621 51413 68832 70813 74961 82534 73793 73287 85727 82774 94082 88223 88483 83752 83962 95615 104060 88722 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78995000 19880 4594 18607 37694;37695 30213;30214 30213 2 9606 Homo sapiens 0.025901543525378656 NLSTATK Unmodified 733.39702 0.39701828 2835 Q6FH24;D3DWY7;P61758-2;P61758 VBP1 Prefoldin subunit 3 yes no 0 0 0 8 0 1 37.9 37.886 2 0.055975 8630 20230619_1888_Aki_TMTPro18x_K_F8 76.679 19.632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19881 2835 18608 37696 30215 30215 1 9606 Homo sapiens 0.019655649092442218 NLSTGQTIVQITK Unmodified 1401.7827 0.78274359 4781 yes no 0 0 0 3.33 0.471 2 1 35.433 35.487 4 0.0023331 7753 20230619_1882_Aki_TMTPro18x_K_F3 77.912 33.92 + 364740 217580 356570 373700 469050 473300 407890 468780 559030 366110 463560 594600 523800 487380 403810 334820 756850 694670 336640 200680 364610 365660 476600 470750 419550 476340 556560 382760 483470 588930 527710 498460 431720 359280 720310 656220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 345060000 19882 4781 18609 37697;37698;37699 30216 30216 1 9606 Homo sapiens 0.09792352515000857 NLSVEDAAR Unmodified 973.48287 0.48287317 1490 B4DWK8;A0A384P5Q0;P04040 CAT Catalase yes no 0 0 0 2.5 0.5 1 1 38.886 38.952 2 0.0001206 9312 20230619_1881_Aki_TMTPro18x_K_F2 173.75 115.03 95911 71351 74452 76132 112780 117090 101090 104970 172370 93476 119720 125570 115920 105760 108910 113600 142060 137890 88472 65399 77996 77058 113940 115050 104730 107720 169170 96248 125150 125370 118210 110140 112720 115380 135570 130730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63728000 19883 1490 18610 37700;37701 30217;30218 30217 2 9606 Homo sapiens -0.004928949759005263 NLTEDNSQNQDLIAK Unmodified 1701.817 0.81695684 4650 Q9UBB4;Q9UBB4-2;Q9NTC6;B1AHE3 ATXN10;DKFZp434I1726 Ataxin-10 yes no 0 0 0 3.5 0.5 1 1 49.025 49.083 3 1.3732E-07 13717 20230619_1882_Aki_TMTPro18x_K_F3 124.62 105.89 59822 53264 70135 58838 61739 80512 77280 71966 93862 78337 92619 93401 79425 79303 68560 100630 90050 101030 55425 48802 70218 59288 65296 79553 77531 74280 94538 79328 94491 93698 81068 83329 71281 100700 86027 95912 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 791700000 19884 4650 18611 37702;37703 30219 30219 1 9606 Homo sapiens -0.00587895854710041 NLTEEERR Unmodified 1045.5152 0.51523593 3657 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 0 0 1 1.5 0.5 1 1 28.352 28.389 3 5.1894E-05 5401 20230619_1880_Aki_TMTPro18x_K_F1 160.59 76.639 49214 26339 52441 50264 63210 74840 58200 60386 71979 53843 69090 70835 76214 59337 66466 33627 73585 64817 45433 24347 53157 49071 64722 73418 59408 62498 72372 55328 71339 70679 77051 60294 67956 36072 70276 61265 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60028000 19885 3657 18612 37704;37705 30220 30220 1 9606 Homo sapiens -0.00570107572912093 NLTEGLK Unmodified 773.42832 0.42831841 1819 Q6PGP7;A0A8V8TMA8;A0A8V8TMB2;A0A8V8TLS3;A0A8V8TLT2;A0A8V8TNJ4;A0A8V8TLU2;A0A8V8TLT7;A0A8V8TLU5;A0A8V8TNK4;A0A8V8TN92;A0A8V8TNK9;A0A8V8TNA2;A0A8V8TNJ9;D6RCE2;H0Y915;A0A8V8TM98 TTC37 Tetratricopeptide repeat protein 37 yes no 0 0 0 7 0 1 46.374 46.462 2 0.044137 11944 20230619_1887_Aki_TMTPro18x_K_F7 84.743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19886 1819 18613 37706 30221 30221 1 9606 Homo sapiens 0.032541379433382644 NLTEQNSYSNIPHEGK Unmodified 1829.8544 0.85440498 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;Q9NZB2-5;Q9NZB2-2;A0A0C4DH52;Q5T035 FAM120A;C9orf129 Constitutive coactivator of PPAR-gamma-like protein 1;Putative uncharacterized protein C9orf129 yes no 0 0 0 5 0 1 42.744 42.827 3 1.2759E-06 10695 20230619_1885_Aki_TMTPro18x_K_F5 126.16 117.11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19887 1839 18614 37707 30222 30222 1 9606 Homo sapiens -0.02732804589118132 NLTGDVCAVMR Unmodified 1234.5798 0.5798268 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 0 6.5 0.5 1 1 50.649 50.728 2 0.00013872 13911 20230619_1887_Aki_TMTPro18x_K_F7 143.24 121.77 194730 165760 196740 172790 155440 191000 205830 188440 229960 196360 199550 159370 203290 157380 199280 206970 204900 193910 180130 151820 198960 174320 166230 191730 205370 192920 231570 196990 206100 163600 207080 165140 203060 206440 195920 184360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 312040000 19888 4016 18615 37708;37709 30223 30223 1 9606 Homo sapiens -0.02807992082784949 NLTGTAR Unmodified 731.3926 0.3926016 2398;1563;544 Q5U045;Q53EZ1;B3KRV2;P49674;H0Y645;B0QY35;B0QY34;A0A669KBC0;J3QQI9;B0QY36;H0Y2N6;P48729-2;P48729;U3KPX3;A0A590UJ43;V9HW00;P48729-3;A0A5F9W493;Q6PJ06;B4DER9;Q05DL3;B4E1D9;E7ETM0;D6REM4;B4DFH4;H0Y9X2;U3KQ83;B4E0G1;A0A024R8X3;H7BYT1;P48730-2;P48730;B4DIJ9;Q59FJ7 CSNK1E;CSNK1D;CSNK1A1;HEL-S-77p Casein kinase I isoform epsilon;Casein kinase I isoform alpha;Casein kinase I isoform delta no no 0 0 0 6 0 1 30.708 30.739 2 0.047723 6060 20230619_1886_Aki_TMTPro18x_K_F6 87.251 28.647 17156 7898.1 22803 24976 28082 25394 23389 25602 24294 15596 26614 29877 24116 23397 22868 9886.2 29671 25671 15863 7381.2 22778 23789 28562 25629 23899 25883 24750 16739 27111 29433 24655 23634 23574 11084 28296 24230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17183000 19889 2398;1563;544 18616 37710 30224 30224 1 9606 Homo sapiens 0.016161004863306516 NLTNLASNVK Unmodified 1072.5877 0.58767259 1993 A8E4L4;Q96DT7-4;Q96DT7-3;Q96DT7-2;Q96DT7 ZBTB10 Zinc finger and BTB domain-containing protein 10 yes no 0 0 0 2 0 1 50.228 50.28 2 0.0075001 14601 20230619_1881_Aki_TMTPro18x_K_F2 84.507 41.909 58752 51282 56758 58212 51208 60869 60833 61864 74598 58120 51477 42586 54606 43228 59317 57961 59682 48758 54334 47001 57753 58277 53945 61373 61203 63024 74262 58502 54000 44005 55849 45367 60243 57502 57024 46449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62823000 19890 1993 18617 37711 30225 30225 1 9606 Homo sapiens 0.05428226500657729 NLTQDEMQR Oxidation (M) 1149.5084 0.508436 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 1 0 1.5 0.5 1 1 32.375 32.405 2 0.00092919 6953 20230619_1880_Aki_TMTPro18x_K_F1 117.84 77.888 134200 93381 112650 127240 151510 153150 141270 152190 189360 151940 171320 171160 192440 160580 144980 188200 221780 177790 123810 85821 116880 126020 154050 152880 144510 155480 189390 154250 177480 172610 193550 167440 152710 187990 211150 169140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 203420000 19891 3152 18618 37712;37713 30226;30227 30226 1834 2 9606 Homo sapiens -0.060337885158105564 NLTQDEMQR Unmodified 1133.5135 0.51352137 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 2 0 1 37.105 37.166 2 2.6516E-06 8544 20230619_1881_Aki_TMTPro18x_K_F2 217.2 129.88 196440 169250 155470 163630 182250 192980 193810 191610 262190 245030 253140 240220 280990 246130 200260 284940 302020 244140 181390 154920 161790 166230 187650 193030 196810 197220 262880 244730 261150 244390 282220 255660 211120 283210 287580 232530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212510000 19892 3152 18618 37714 30228 30228 1 9606 Homo sapiens -0.04789484653178988 NLTVSNTR Unmodified 903.47739 0.47739386 2509 B4DK32;Q14139;Q14139-2;Q05BZ7 UBE4A Ubiquitin conjugation factor E4 A yes no 0 0 0 7 0 1 34.055 34.137 2 0.0091343 6976 20230619_1887_Aki_TMTPro18x_K_F7 102.62 40.157 24849 15010 29653 30992 37779 42351 32096 34693 38458 28246 38326 42071 31706 29455 41943 22304 48702 38389 22976 13883 29853 30097 38447 41753 32900 35795 38769 29327 39085 41620 33082 30424 42726 23496 46461 36330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11934000 19893 2509 18619 37715 30229 30229 1 9606 Homo sapiens 0.021794262322828217 NLVAFVSQEAGNR Unmodified 1403.7157 0.71572665 483 A0A024R806;Q9BT73 MGC10911;PSMG3 Proteasome assembly chaperone 3 yes no 0 0 0 8 0 1 58.73 58.772 3 2.8699E-06 17303 20230619_1888_Aki_TMTPro18x_K_F8 100.07 78.514 17821 18807 17112 18947 16392 17362 18531 18812 19110 20132 21912 17420 21744 17249 21275 25319 19974 19971 16503 17209 17441 19115 17134 17724 18587 19155 19551 20189 22315 17834 22162 18226 21594 25003 19124 19025 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65177000 19894 483 18620 37716 30230 30230 1 9606 Homo sapiens 0.030017420238891646 NLVCTDLFTR Unmodified 1237.6125 0.61250714 2256 P26196;B2R858 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 0 4.5 3.5 1 1 56.564 56.564 2 4.3439E-05 17051 20230619_1880_Aki_TMTPro18x_K_F1 148.32 115.06 207400 184900 206170 199840 226140 276760 224830 225540 250480 239790 222620 209060 247610 202470 200460 261150 241650 264880 191870 169380 209830 201660 233520 272830 227590 234250 252730 240730 230690 213520 249670 212270 207290 261500 230970 251460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 464250000 19895 2256 18621 37717;37718 30231;30232 30231 2 9606 Homo sapiens 0.003205383117119709 NLVDNVAK Unmodified 871.47633 0.47633123 2806 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;Q9BZE4-2;O60747;Q5T3R7 GTPBP4 Nucleolar GTP-binding protein 1 yes no 0 0 0 6.5 0.5 1 1 45.537 45.624 2 1.7674E-07 11952 20230619_1886_Aki_TMTPro18x_K_F6 215.39 144.09 401730 320960 347680 370820 434310 436960 393780 392560 496240 439350 484080 483440 529630 408480 396760 572610 552410 462290 371000 294310 359040 371300 443160 436020 402560 405360 499210 443010 499030 486530 532660 432470 415320 566100 526420 440580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 389590000 19896 2806 18622 37719;37720 30233;30234 30233 2 9606 Homo sapiens 0.035452118633770624 NLVELAELELK Unmodified 1269.718 0.71801807 2117 A8K885;Q9UNH7;A0A0A0MRI2;B4DJS7;Q9UNH7-2;Q5QTQ6 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 64.331 64.357 3 0.0014686 19897 20230619_1885_Aki_TMTPro18x_K_F5 86.288 57.961 57104 48576 55291 57188 51101 60234 62230 61579 60608 59949 67409 67119 61423 60772 68906 79196 64891 71386 52802 44540 56273 57103 53724 60706 62070 62782 62091 60884 68606 67646 63286 63812 69779 78824 62171 67862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90798000 19897 2117 18623 37721;37722 30235 30235 1 9606 Homo sapiens 0.0939477770900794 NLVHSGATK Unmodified 925.49813 0.49812931 2619 K7ESE8;J3KSD8;K7ES02;B4DXF3;Q13867 BLMH Bleomycin hydrolase yes no 0 0 0 8 0 1 33.573 33.569 3 0.0019585 6929 20230619_1888_Aki_TMTPro18x_K_F8 87.806 67.477 35758 17923 34626 37311 65601 76796 44617 48193 75993 18968 32915 29307 23586 22333 37543 16876 31303 26917 32976 16596 35753 36533 65232 73937 47127 50399 73725 21193 35379 29076 25063 22975 37468 17679 29980 25476 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14106000 19898 2619 18624 37723 30236 30236 1 9606 Homo sapiens 0.032400166119600726 NLVNDDDAIVAASK Unmodified 1443.7205 0.72053726 3795 Q9BUI6;Q05086-3;A0A0D9SG77;A0A6Q8PHE5;A0A1B0GVL3;Q9H2G0;Q05086-2;Q05086;Q96GR7;Q5W7F7 UBE3A Ubiquitin-protein ligase E3A yes no 0 0 0 3.5 0.5 1 1 53.001 53.04 3 0.027921 15389 20230619_1883_Aki_TMTPro18x_K_F4 51.03 36.344 124280 111670 134620 137120 119080 148650 137540 145090 158510 162090 154590 148060 174980 151140 163810 192600 179620 179500 115060 102410 135690 136560 125540 149320 138330 148890 160220 162490 159660 151140 177450 157990 167800 192070 171700 170630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 244680000 19899 3795 18625 37724;37725 30237 30237 1 9606 Homo sapiens 0.01642581375995178 NLVPGESVYGEK Unmodified 1290.6456 0.6455814 3487 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R299;M0R0P1;M0R2U2;M0R1H0;M0R2B0 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 0 0 5.2 0.748 1 2 2 50.551 50.618 2;3 2.8551E-07 13989 20230619_1885_Aki_TMTPro18x_K_F5 200.67 129.45 348200 297680 316250 352350 339710 378980 367060 378470 455750 418840 441430 426200 457980 382440 408470 466710 455190 447260 321810 272950 324490 351730 351970 381230 371290 387720 458640 421440 454160 430990 464520 400400 419130 466420 435010 425050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 772260000 19900 3487 18626 37726;37727;37728;37729;37730 30238;30239 30238 2 9606 Homo sapiens 0.011884436353966521 NLVSPAYCTQESR Unmodified 1523.7038 0.70384134 4599 Q9NUQ3 TXLNG Gamma-taxilin yes yes 0 0 0 6 0 1 43.111 43.204 2 1.4221E-05 10882 20230619_1886_Aki_TMTPro18x_K_F6 130.01 111.69 8546 6409.7 9182.6 10169 9312 7567.5 9628.7 9655.3 10676 11029 9024.3 12250 11515 9410.3 12158 13228 10699 16200 7903 5899.6 9279.1 9923.5 9647.3 7901.5 9724.4 9761 10763 11104 9473.1 12275 11701 10009 12279 13391 10289 15336 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15491000 19901 4599 18627 37731 30240 30240 1 9606 Homo sapiens -0.03706242781640867 NLVSYLK Unmodified 835.48035 0.48035398 840 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37;Q59EY1;Q0VA89;Q13722;Q8NDT2-2;Q8NDT2 RBM15;RBM15B Putative RNA-binding protein 15;Putative RNA-binding protein 15B yes no 0 0 0 3 0 1 56.134 56.17 2 0.011144 16852 20230619_1882_Aki_TMTPro18x_K_F3 121.62 54.937 153500 123110 143010 156620 154200 174470 171370 170630 195110 160010 170950 160770 179390 154580 161940 184560 184160 170660 141840 112990 146410 155640 159820 174950 172510 174300 196360 162380 176830 163080 182040 161210 166320 184150 175890 162290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38014000 19902 840 18628 37732 30241 30241 1 9606 Homo sapiens 0.05603301357098189 NLVTEDVMR Oxidation (M) 1091.5281 0.5281088 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;B4DVJ0;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;A0A0J9YXP8;K7ERC6;K7EPY4;K7EP41;K7ENA0;A0A0J9YXM3;K7EIL4;K7ELR7;A0A2R8YF08;Q59F85;K7ERK8;A0A0J9YXH9;A0A0J9YYI8 GPI Glucose-6-phosphate isomerase yes no 0 1 0 2.5 0.5 1 1 41.138 41.206 2 0.037312 10350 20230619_1881_Aki_TMTPro18x_K_F2 67.414 49.428 335710 266110 310650 337550 512130 537550 350280 398560 538930 342890 484840 526180 410890 388870 423940 417330 542970 533450 310170 244250 320740 337460 511920 525200 368420 415110 535480 355550 496980 521160 422770 407000 437380 425460 518290 505480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 222670000 19903 1326 18629 37733;37734 30242 30242 832 1 9606 Homo sapiens -0.013994125050430739 NLVTEDVMR Unmodified 1075.5332 0.53319418 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;B4DVJ0;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;A0A0J9YXP8;K7ERC6;K7EPY4;K7EP41;K7ENA0;A0A0J9YXM3;K7EIL4;K7ELR7;A0A2R8YF08;Q59F85;K7ERK8;A0A0J9YXH9;A0A0J9YYI8 GPI Glucose-6-phosphate isomerase yes no 0 0 0 3.5 0.5 1 1 47.654 47.714 2 0.028327 13129 20230619_1882_Aki_TMTPro18x_K_F3 70.816 54.04 318800 238700 326230 285640 224290 382130 298990 307060 433720 358140 393560 364470 370030 289190 371040 383610 414360 402020 294680 219010 329150 285950 244350 377020 301440 320160 432240 359640 404440 367290 378340 305950 379740 384950 395960 381690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 738200000 19904 1326 18629 37735;37736 30243 30243 1 9606 Homo sapiens -0.0015510864241150557 NLVTGDHIPTPQDLPQR Unmodified 1899.9803 0.9802742 1982 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7 ENSA Alpha-endosulfine yes no 0 0 0 6 0 1 49.56 49.638 3 3.9341E-06 13655 20230619_1886_Aki_TMTPro18x_K_F6 99.044 83.104 45331 36899 42155 50082 42338 55664 36564 44603 65815 42917 56837 52097 52556 40313 51070 50501 57122 63370 41891 33889 43135 49537 43953 55577 38133 46282 64937 43798 58503 52108 53683 42549 52291 51301 54639 60030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271170000 19905 1982 18630 37737 30244 30244 1 9606 Homo sapiens 0.06628326986992761 NLVTGDHIPTPQDLPQRK Unmodified 2028.0752 0.075237214 1982 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7 ENSA Alpha-endosulfine yes no 0 0 1 4.5 3.5 1 1 47.595 47.624 4 9.1149E-14 12464 20230619_1888_Aki_TMTPro18x_K_F8 158.45 128.71 118360 105620 104290 109430 108170 105040 117230 105340 130860 111780 111230 102600 115810 94454 116500 113380 122360 106400 109400 96713 107180 110210 112220 106660 118070 107820 131730 112390 115220 104330 118070 98723 118750 113260 116900 101190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 337560000 19906 1982 18631 37738;37739 30245;30246 30246 2 9606 Homo sapiens 0.10232260458155906 NLVVIPK Unmodified 781.50617 0.5061748 435 A0A024R7A8;P15121 AKR1B1 Aldose reductase yes no 0 0 0 2.5 0.5 1 1 52.774 52.82 2 0.017711 15355 20230619_1882_Aki_TMTPro18x_K_F3 108.24 35.199 969280 822250 914820 1059800 938050 1056600 937840 958420 1107000 1182300 1278500 1304900 1203200 1198400 1190200 1420500 1313500 1387600 896060 754630 934980 1050400 973050 1066500 951340 992170 1125400 1186600 1300700 1315700 1231000 1250500 1218700 1421500 1256000 1318000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 878420000 19907 435 18632 37740;37741 30247;30248 30248 2 9606 Homo sapiens 0.10668195599384944 NLVYDQSPNR Unmodified 1204.5836 0.58364985 4622 Q9NXR1-1;Q9NXR1;X5DR54;I3L533;I3L2R9;I3L2T8 NDE1 Nuclear distribution protein nudE homolog 1 yes no 0 0 0 5 0 1 40.042 40.132 2 2.9747E-05 9587 20230619_1885_Aki_TMTPro18x_K_F5 155.42 142.33 27378 23548 27163 26493 30423 34698 29458 27422 37123 30956 34302 30987 34597 29887 34395 36821 40509 30528 25322 21581 27656 26625 31338 34301 29992 28614 37256 31123 35321 31444 35304 31220 35325 36536 38631 29099 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19174000 19908 4622 18633 37742 30249 30249 1 9606 Homo sapiens -0.010458629930553798 NLYHSEAFSINFR Unmodified 1596.7685 0.76849051 2785 CON__P34955 yes yes 0 0 0 2 0 1 52.45 52.489 3 2.6334999999999997E-21 15475 20230619_1881_Aki_TMTPro18x_K_F2 223.03 191.39 + 133550 133690 162930 145950 236760 256170 199240 212120 254880 194760 202600 211760 194730 161430 189140 213750 190840 244980 123890 122430 164080 147880 239040 249690 204750 219110 254320 198400 210040 212510 198720 171010 192690 215610 182950 232150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 187350000 19909 2785 18634 37743 30250;30251 30250 2 -0.006022999132937912 NLYIISVK Unmodified 948.56442 0.56441796 153 Q9BTQ7;A0A024R1Q8;P62829;C9JD32;B9ZVP7;J3KT29;A4D142 RPL23;LOC222901 60S ribosomal protein L23 yes no 0 0 0 3 0.816 1 1 1 57.979 57.996 2 5.8239E-05 17578 20230619_1882_Aki_TMTPro18x_K_F3 186.3 114.16 744820 633050 672640 694010 668980 758430 774130 770770 843110 855030 756860 703900 930910 779820 630940 934090 477100 874060 688330 580070 689420 697050 698310 762500 776620 788670 852160 855140 787560 724410 929890 810240 640250 931940 460720 829370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2415100000 19910 153 18635 37744;37745;37746 30252;30253 30252 2 9606 Homo sapiens 0.08807832453999254 NLYPSSSPYTR Unmodified 1283.6146 0.61461563 2079 A8K5T7;Q9Y2Z0;B4DYC6;Q9Y2Z0-2;A8K7W3 SUGT1 Suppressor of G2 allele of SKP1 homolog yes no 0 0 0 1.5 0.5 1 1 43.731 43.731 2 1.8975E-17 11531 20230619_1881_Aki_TMTPro18x_K_F2 200.68 139.72 53362 41195 45043 46319 41981 55130 47077 43538 49278 53737 51676 50126 58016 44960 50484 66877 59101 55012 49261 37770 46417 46477 44074 54805 47250 45562 50211 53657 53174 50909 58631 47713 52034 66138 56436 52391 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42584000 19911 2079 18636 37747;37748 30254;30255 30255 2 9606 Homo sapiens -0.015847096788320414 NLYSDDIPHALR Unmodified 1412.7048 0.70482762 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;B3KW56;A0A7I2V4B4;A0A7I2V3I2;H0YBP5;A0A7I2V4G3;A0A161SXE1;A0A7I2V570;A0A7I2V429;H0YBR5;A0A7I2V3W9;A0A7I2V2Q9 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 0 5 0.816 1 1 1 47.242 47.309 3 2.4145E-10 12561 20230619_1885_Aki_TMTPro18x_K_F5 189.43 155.35 39869 35796 37759 38523 44824 47269 38030 43865 50202 39984 39816 47169 50068 38710 41994 53752 46725 46512 36872 32789 38634 38811 45829 47075 39132 44926 50040 40852 41834 47278 50374 41003 43170 53335 44659 44255 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 737180000 19912 1659 18637 37749;37750;37751 30256 30256 1 9606 Homo sapiens 0.014983396496063506 NLYTNEYVAIK Unmodified 1326.682 0.68196691 363 Q9HCP0;A0A024R5W3;A0A0U1RQT7;U3KQB3;Q8IXA3;K7ESB6;A0A024R604;A0A8V8TKT3;A0A0U1RR14;A0A0U1RQK2;Q9HCP0-2;P78368;A0A0U1RQY7;Q9Y6M4-3;Q9Y6M4-4;Q9Y6M4;Q9Y6M4-2;U3KQA5;K7EP38;A0A0U1RQH9;B7Z7D1 CSNK1G1;hCG_2004507;CSNK1G2;CSNK1G3 Casein kinase I isoform gamma-1;Casein kinase I isoform gamma-2;Casein kinase I isoform gamma-3 yes no 0 0 0 8 0 1 54.836 54.902 3 0.049065 15675 20230619_1888_Aki_TMTPro18x_K_F8 45.911 31.011 75728 57265 63849 74356 62844 87727 82040 81359 78608 87386 87222 78810 89402 82482 79955 105990 91077 98948 69899 52583 65929 73841 66019 87488 81506 83705 80658 87727 89129 80600 90777 86178 82234 105660 87088 94027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84246000 19913 363 18638 37752 30257 30257 1 9606 Homo sapiens 0.03169320532151687 NMACVQR Unmodified 877.38984 0.38984118 1438 A0A384MTL2;P37802;P37802-2;X6RJP6 TAGLN2 Transgelin-2 yes no 0 0 0 7 0.816 1 1 1 32.313 32.357 2 0.0073036 6213 20230619_1887_Aki_TMTPro18x_K_F7 126.24 78.001 109560 56283 129010 105860 118730 132670 130400 182960 164590 86779 97022 95008 115610 91335 103470 58427 123270 90649 101220 52025 129140 103220 124460 133130 131980 180640 162800 93152 103530 95960 116820 92684 106240 61218 117530 85877 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 218820000 19914 1438 18639 37753;37754;37755 30258;30259;30260 30259 3 9606 Homo sapiens -0.05375814234480458 NMADAMR Unmodified 807.33674 0.33674298 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 4 0 1 36.677 36.723 2 0.0095486 8225 20230619_1883_Aki_TMTPro18x_K_F4 119.17 96.025 155620 117670 155220 136420 144320 151360 132440 119550 167250 154290 164280 139260 151670 127830 146710 154960 186890 129990 143830 107930 157390 136480 150460 151260 135370 125310 168280 153700 167960 141750 155000 133650 151510 153890 178030 123940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115300000 19915 161 18640 37756 30261 30261 1 9606 Homo sapiens -0.07463192017155507 NMADRYER Unmodified 1053.4662 0.46617725 701 Q9NRF8;A0A024RC00 CTPS2 CTP synthase 2;CTP synthase yes no 0 0 1 3.5 0.5 1 1 29.957 30.038 3 0.038058 5589 20230619_1883_Aki_TMTPro18x_K_F4 64.04 40.612 56718 50569 53603 54387 66194 60227 56236 58717 58779 63850 71594 69009 66278 64403 62311 61783 79423 62041 52451 46322 54881 54717 67396 60483 57392 60221 60282 64400 72604 69660 67688 66406 64364 62163 75706 58987 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20265000 19916 701 18641 37757;37758 30262;30263 30263 2 9606 Homo sapiens -0.05841719133513834 NMDAIIVDSEK Unmodified 1233.5911 0.59110299 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 3 0 1 54.751 54.797 2 6.1723E-06 16297 20230619_1882_Aki_TMTPro18x_K_F3 178.71 108.46 38941 30749 33181 37134 30072 38517 37977 35767 41428 45999 47540 40672 48446 44529 39439 53631 47409 53981 35956 28209 34170 36994 31750 38772 37945 37010 42269 45784 48472 41702 49013 46282 40784 53724 45329 51244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36684000 19917 1432 18642 37759 30264 30264 1 9606 Homo sapiens -0.016348915076378034 NMDDDRLSR Oxidation (M) 1136.488 0.4880349 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 1 1 1 0 1 26.781 26.781 3 0.045235 4742 20230619_1880_Aki_TMTPro18x_K_F1 60.102 43.849 8363.1 5227.7 8994.4 8579.7 14657 11733 8827.8 11471 13626 10014 12213 12518 10838 9414.4 8667.6 8238.8 14266 11606 7726.6 4817.7 9158.6 8427.6 14593 11625 9394 11688 13547 10279 12533 12483 11009 9754.1 9156.7 8489.6 13577 10997 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48836000 19918 3152 18643 37760 30265 30265 1835 1 9606 Homo sapiens -0.07474959175601725 NMDDDRLSR Unmodified 1120.4931 0.49312028 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 2 0 1 31.611 31.674 3 3.4088E-06 6368 20230619_1881_Aki_TMTPro18x_K_F2 169.93 144 92996 75860 87968 89799 116900 103350 103240 110760 126940 113320 121910 100770 119250 98756 115120 130870 145810 99866 85951 69572 90190 89754 118610 103720 105630 112660 127770 114030 125060 102940 121620 103610 118890 129230 138890 95350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95133000 19919 3152 18643 37761 30266 30266 1 9606 Homo sapiens -0.06230655312992894 NMDSMPELQK 2 Oxidation (M) 1223.5162 0.51622349 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7 UPF1 Regulator of nonsense transcripts 1 yes no 0 2 0 3 0 1 40.129 40.186 3 0.051158 9727 20230619_1882_Aki_TMTPro18x_K_F3 41.704 27.798 44861 25599 47518 47594 62980 56607 52447 57095 64581 44966 50627 50865 59585 46385 54552 37665 56844 50186 41424 23644 48263 46347 63819 56561 53874 57954 64512 46308 52997 51202 60262 47573 55585 38755 54320 47559 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28745000 19920 462 18644 37762 30267 30267 283;284 1 9606 Homo sapiens -0.08659397310520944 NMFHSCTGQAVK Oxidation (M) 1394.6071 0.60710418 3315 O75691 UTP20 Small subunit processome component 20 homolog yes yes 0 1 0 8 0 1 34.979 34.971 3 0.0045983 7477 20230619_1888_Aki_TMTPro18x_K_F8 70.089 56.126 46468 31798 38159 36315 46459 55052 52426 51719 65667 21012 17200 15964 17660 13265 25078 21521 24231 15258 42860 29174 39581 36564 47829 54151 52870 52226 64074 22811 19961 16381 18380 14212 25300 21156 23130 14591 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8364000 19921 3315 18645 37763 30268;30269 30269 1948 2 9606 Homo sapiens -0.07441508542410702 NMFLQAVK Unmodified 949.50552 0.50552287 1901 A0RZB8;Q6URC4;O60610-2;O60610-3;O60610;A0A1E1ERW3;A0A2R8Y5N1;Q7KZJ7;Q96IL1;B4DVR3 DIAPH1 Protein diaphanous homolog 1 yes no 0 0 0 3.5 0.5 1 1 56.215 56.237 2 0.011385 16754 20230619_1883_Aki_TMTPro18x_K_F4 103.92 59.28 37371 32269 32945 28576 33304 51134 38135 32642 61280 17019 18879 20051 23061 20318 28263 25107 21363 23306 34534 29516 33834 29478 34867 49550 38834 34214 59274 18250 21567 20255 23671 21195 28250 25064 20520 22148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15061000 19922 1901 18646 37764;37765 30270 30270 1 9606 Homo sapiens 0.028750328880278175 NMFLVGEGDSVITQVLNK Unmodified 1963.0085 0.0084627814 3306 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 2 0 1 64.957 64.965 3 1.3151E-09 20807 20230619_1881_Aki_TMTPro18x_K_F2 132.59 111.64 9597.2 6128.6 8633.2 8638.9 9313.5 8415 9300.8 7015.9 8255 11293 11598 10821 14528 12865 8704.5 10588 10696 12164 8854.7 5636.8 8857.3 8513.1 9603.2 8499.6 9346.7 7387.4 8619.6 11170 11859 11073 14458 13085 9074.1 10762 10225 11531 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17450000 19923 3306 18647 37766 30271 30271 1 9606 Homo sapiens 0.06547888852060169 NMFTNQDR Oxidation (M) 1040.4345 0.43454277 906 B7Z1U8;B3KQQ0;A0A090N8P3;O95302;O95302-3;B7Z230;A0A090N7W0;A7YQ73;B7ZAH5;B7Z994;Q75LS8;O95302-2 FKBP9;FKBP9L;FKBP9P1 Peptidyl-prolyl cis-trans isomerase FKBP9;Putative FK506-binding protein 9-like protein yes no 0 1 0 3.5 0.5 1 1 31.972 32.042 2 0.031686 6323 20230619_1883_Aki_TMTPro18x_K_F4 72.23 48.706 13799 9547.3 11152 12107 19933 18188 17099 14717 16095 12684 17750 20695 18057 15125 15707 13376 19021 17727 12727 8767.9 11684 12092 19904 17859 17363 15228 16509 13176 18167 20444 18306 15693 16181 13724 18158 16796 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13450000 19924 906 18648 37767;37768 30272 30272 514 1 9606 Homo sapiens -0.0840571188746253 NMGADLCR Unmodified 935.39532 0.39532049 2219 B4DGN8;B2R5M9;Q02809;Q02809-2 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes no 0 0 0 4.5 0.5 1 1 37.957 38.025 2 0.029208 8726 20230619_1883_Aki_TMTPro18x_K_F4 91.064 59.775 56771 36820 62931 64591 102310 98110 73945 88898 91138 56981 75382 86958 62866 62028 87022 56568 89050 83563 52474 33957 63994 63337 102290 96429 76755 90541 91142 60248 77663 86034 65780 64494 88001 58547 85144 79103 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42519000 19925 2219 18649 37769;37770 30273 30273 1 9606 Homo sapiens -0.07496135442681862 NMGGPYGGGNYGPGGSGGSGGYGGR Oxidation (M) 2204.893 0.89299211 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A024RA28 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 1 0 5.33 3.09 2 2 2 38.955 38.972 3 3.2141000000000003E-35 9134 20230619_1887_Aki_TMTPro18x_K_F7 210.5 202 84031 71180 66773 85237 83314 92983 90695 94280 86314 111610 112360 119670 110790 98182 98197 120730 115520 126610 77586 65278 69635 85015 85449 93472 90901 96675 89335 112040 114030 120360 112550 103170 101160 121220 110440 120150 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 3164699999.9999995 19926 3491 18650 37771;37772;37773;37774;37775;37776 30274;30275;30276;30277;30278;30279 30276 2155 6 9606 Homo sapiens -0.16125867016899065 NMGGPYGGGNYGPGGSGGSGGYGGR Unmodified 2188.8981 0.89807748 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A024RA28 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 3.67 3.09 1 1 1 43.898 43.932 3 1.5225E-53 11803 20230619_1880_Aki_TMTPro18x_K_F1 245.92 245.05 211910 179240 218600 221520 211630 257350 234510 259660 235570 322850 314480 340510 331320 323160 309780 359650 359020 388060 196040 164430 221450 220750 221100 257500 235360 266670 243490 323250 319890 344200 336880 335710 318390 362290 343230 368170 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2084399999.9999998 19927 3491 18650 37777;37778;37779 30280;30281;30282 30280 3 9606 Homo sapiens -0.1488156315431297 NMGLSPPASSTSTSSTCR Oxidation (M) 1855.804 0.80402567 4549 Q9HC52;C9J6K3;C9JM54 CBX8 Chromobox protein homolog 8 yes no 0 1 0 7 0 1 35.981 36.048 3 3.6285E-05 7718 20230619_1887_Aki_TMTPro18x_K_F7 88.551 84.647 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19928 4549 18651 37780 30283 30283 2811 1 9606 Homo sapiens -0.08964418300774923 NMGLYGER Oxidation (M) 954.42292 0.42291545 415 B3KUZ8;A0A024R6W0;P00505;A8K482;P00505-2 GOT2 Aspartate aminotransferase;Aspartate aminotransferase, mitochondrial yes no 0 1 0 3.5 0.5 1 1 34.362 34.418 2 0.025817 7331 20230619_1882_Aki_TMTPro18x_K_F3 76.605 32.87 74998 64655 76441 78753 100030 80476 81439 92330 195490 85399 94269 78777 85200 87293 77458 83040 96407 80824 69383 59301 77853 78426 101540 81604 86627 93280 188280 86751 100910 80623 87048 89478 79971 83398 91951 76848 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158640000 19929 415 18652 37781;37782 30284 30284 263 1 9606 Homo sapiens -0.05611908910782404 NMGYVQQR Oxidation (M) 1010.4604 0.46036359 1173 J3QT28;A0A140VJF3;O43684-2;O43684;B4DDM6 BUB3 Mitotic checkpoint protein BUB3 yes no 0 1 0 5.5 0.5 1 1 29.401 29.454 2 0.019428 5577 20230619_1886_Aki_TMTPro18x_K_F6 84.097 67.944 32896 26214 29114 34481 45490 42400 36291 36570 52717 29496 40601 34159 33239 31454 36667 28556 38714 28609 30384 24069 30157 34230 45687 42154 37614 37577 52203 30388 41861 34400 34348 32363 37289 28783 36951 27210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65531000 19930 1173 18653 37783;37784 30285;30286 30286 720 2 9606 Homo sapiens -0.04444817645162402 NMGYVQQR Unmodified 994.46545 0.46544897 1173 J3QT28;A0A140VJF3;O43684-2;O43684;B4DDM6 BUB3 Mitotic checkpoint protein BUB3 yes no 0 0 0 7.5 0.5 1 1 35.429 35.459 2 0.0012864 7667 20230619_1888_Aki_TMTPro18x_K_F8 145.04 119.87 117440 88351 104240 111430 138550 139800 112910 125930 169470 117230 132910 113770 132240 110120 123380 109740 151480 109430 108440 81105 107510 111000 140560 138920 117080 129320 167840 118970 137900 115590 134590 113710 127060 110340 144370 104100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129770000 19931 1173 18653 37785;37786 30287;30288 30288 2 9606 Homo sapiens -0.032005137825422025 NMIIELLR Oxidation (M) 1016.5689 0.56885141 4772 yes no 0 1 0 7.67 0.471 1 2 45.581 45.634 3 0.067524 11729 20230619_1888_Aki_TMTPro18x_K_F8 41.025 20.123 + 57225 40165 48744 52401 45064 61375 54847 55442 81236 47537 42099 32986 44645 37644 47672 53326 49236 34533 52803 36894 50203 52023 47526 61204 55520 56829 79601 48113 45092 34372 45652 39492 48535 52273 46992 33053 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63191000 19932 4772 18654 37787;37788;37789 30289 30289 2908 1 9606 Homo sapiens 0.06122973605260995 NMLFSGTNIAAGK Unmodified 1322.6653 0.66527099 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9;Q8N3X5;O14983-2;O14983;Q7Z675;Q7Z6E5;O14983-3 ATP2A2;ATP2A1;DKFZp779O2152;DKFZp779G2251 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Calcium-transporting ATPase yes no 0 0 0 3.5 0.5 1 1 56.778 56.799 3 5.3074E-06 16993 20230619_1883_Aki_TMTPro18x_K_F4 124.86 110.3 68770 51974 69577 81467 63171 77601 89226 77962 78515 78828 84438 88622 108580 92843 83113 92036 103660 98363 63565 47829 70614 79750 66828 78714 88105 79706 80841 79928 87439 89672 108860 95593 86138 92843 98943 93378 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 455810000 19933 1076 18655 37790;37791 30290 30290 1 9606 Homo sapiens 0.016844963745370478 NMMAACDPR Oxidation (M) 1080.4151 0.41506966 3748;1486;3381;983;1424;3870;2562;3176;3970 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;Q1KSF8;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DJ43;B4DE77;B4DFH6;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB3;TUBB2B;DKFZp566F223;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB8;TUBB4A;TUBB6 Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 1 0 4.44 1.57 1 2 2 1 2 1 32.737 32.803 2 0.0076143 6735 20230619_1885_Aki_TMTPro18x_K_F5 85.161 64.832 517990 414640 443120 415430 420610 505060 471140 468640 565890 438230 469530 411180 438690 371650 453530 455980 553850 394390 478330 379740 455880 421010 440680 503190 475080 480400 566830 443990 484590 417630 449580 389070 466400 453480 527850 375830 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 2177500000 19934 983;1424;1486;3748;3870;3970;3381;2562;3176 18656 37792;37793;37794;37795;37796;37797;37798;37799;37800 30291;30292;30293;30294;30295;30296;30297;30298;30299 30295 556;557 9 9606 Homo sapiens -0.12192127494245142 NMMAACDPR Unmodified 1064.4202 0.42015503 3748;1486;3381;983;1424;3870;2562;3176;3970 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;Q1KSF8;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DJ43;B4DE77;B4DFH6;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB3;TUBB2B;DKFZp566F223;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB8;TUBB4A;TUBB6 Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 0 0 5 0.816 1 1 1 38.153 38.223 2 0.00015897 8764 20230619_1885_Aki_TMTPro18x_K_F5 146.03 125.7 363340 288270 330760 319730 316460 386360 351670 344060 428630 341580 342370 307060 345530 291830 335220 347900 404540 296400 335660 264250 338460 321320 331280 384650 354920 354330 428640 344540 355260 312940 352170 304470 344900 345850 385650 282460 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1014199999.9999999 19935 983;1424;1486;3748;3870;3970;3381;2562;3176 18656 37801;37802;37803 30300;30301;30302 30301 3 9606 Homo sapiens -0.10947823631613574 NMMAACDPR 2 Oxidation (M) 1096.41 0.40998428 3748;1486;3381;983;1424;3870;2562;3176;3970 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;Q1KSF8;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DJ43;B4DE77;B4DFH6;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB3;TUBB2B;DKFZp566F223;TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB2A;TUBB8;TUBB4A;TUBB6 Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-8 chain;Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 2 0 4.4 1.02 1 2 1 1 30.748 30.814 2 0.050508 5853 20230619_1885_Aki_TMTPro18x_K_F5 63.397 43.068 41134 33833 36862 31979 33271 39602 39355 37767 46096 37099 37838 33768 36724 33904 37376 42248 44051 31798 38004 30967 37720 32587 35047 39440 39537 38686 46220 37453 39141 34468 37579 35383 38385 41730 41999 30358 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 161050000 19936 983;1424;1486;3748;3870;3970;3381;2562;3176 18656 37804;37805;37806;37807;37808 30303;30304 30304 556;557 2 9606 Homo sapiens -0.13436431356831235 NMQDMVEDYR 2 Oxidation (M) 1331.5122 0.51220074 2778 H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2;H6VRF9 KRT1 Keratin, type II cytoskeletal 1 yes no 0 2 0 1 0 1 34.801 34.801 2 0.0091045 7895 20230619_1880_Aki_TMTPro18x_K_F1 72.59 65.959 + 5199.3 6807.1 6018.2 9623 365540 9726.5 35233 8331.5 52939 1298.6 3950.4 1789.9 7713.6 51472 8517 1059 7615.8 8635.8 4831.9 6245.6 10889 9477.4 339320 10912 55013 8505.2 51318 1904.5 6516.1 3483 8120.5 48599 8553.6 2360.6 7302.5 8118.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32537000 19937 2778 18657 37809 30305 30305 1658;1659 1 9606 Homo sapiens -0.1402948680422469 NMQDMVEDYR Oxidation (M) 1315.5173 0.51728612 2778 H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2;H6VRF9 KRT1 Keratin, type II cytoskeletal 1 yes no 0 1 0 1.67 0.471 1 2 41.506 41.545 2 0.0036056 10492 20230619_1881_Aki_TMTPro18x_K_F2 90.919 75.348 + 7192.3 8642.3 7106.2 18958 377610 22270 91451 19236 40473 7769.2 11767 7406.4 12701 79791 14232 11654 17013 12312 6669.3 7981.5 12344 18294 351970 23296 106850 19771 43341 8640.4 13498 10013 13494 76004 14581 12912 16219 11704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54858000 19938 2778 18657 37810;37811;37812 30306;30307 30306 1658;1659 2 9606 Homo sapiens -0.12785182941615858 NMQLPNGVTYHTGTYQDR Unmodified 2093.9589 0.95888683 4361 Q96HR3-2;Q96HR3 MED30 Mediator of RNA polymerase II transcription subunit 30 yes no 0 0 0 8 0 1 45.649 45.687 3 0.030232 11758 20230619_1888_Aki_TMTPro18x_K_F8 55.33 40.402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19939 4361 18658 37813 30308 30308 1 9606 Homo sapiens -0.044334261040148704 NMQNAEEWFK Unmodified 1295.5605 0.56047157 2388 B3KQI5;P07196;B3KXJ0;Q8TCR7;B4DR43 NEFL;DKFZp761K0922 Neurofilament light polypeptide no no 0 0 0 5.5 0.5 1 1 57.186 57.251 3 4.9343E-06 16968 20230619_1886_Aki_TMTPro18x_K_F6 140.49 123.65 73586 65334 78441 59309 41505 51712 53549 55760 52895 68524 75055 73077 80193 72305 72499 76865 73063 84001 68116 59766 78594 60404 46384 53010 53386 57039 54858 68676 76179 73966 81325 74846 73916 77562 69976 79669 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168780000 19940 2388 18659 37814;37815 30309 30309 1 9606 Homo sapiens -0.075486251020493 NMQNVEHVPLSLDR Oxidation (M) 1666.8097 0.80970339 1227 Q53FT8;A0A140VK45;P20618 PSMB1 Proteasome subunit beta type;Proteasome subunit beta type-1 yes no 0 1 0 4.5 0.5 1 1 41.97 42.034 3 2.3421E-07 10385 20230619_1883_Aki_TMTPro18x_K_F4 139.66 119.28 49046 41117 43128 46267 53561 49588 47026 58152 138640 47657 48018 55199 53075 48412 50170 63844 53218 51290 45313 37687 44461 46371 54776 50120 50546 58501 132130 49162 53759 55482 53947 50933 51312 63172 50876 48855 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124400000 19941 1227 18660 37816;37817 30310 30310 765 1 9606 Homo sapiens 0.0029709306388667756 NMQNVEHVPLSLDR Unmodified 1650.8148 0.81478877 1227 Q53FT8;A0A140VK45;P20618 PSMB1 Proteasome subunit beta type;Proteasome subunit beta type-1 yes no 0 0 0 5.5 0.5 1 1 46.787 46.867 3 0.0091884 12422 20230619_1885_Aki_TMTPro18x_K_F5 66.387 36.62 106360 110940 109850 129880 121420 115860 144380 141250 169120 140500 120670 120440 154550 90126 129460 153610 107970 96959 98547 101650 111590 129450 125670 118880 144950 142540 168950 141420 127570 122200 155170 97437 131030 150110 103440 92733 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 504700000 19942 1227 18660 37818;37819 30311 30311 1 9606 Homo sapiens 0.015413969264955085 NMSAMER Unmodified 837.34731 0.34730767 4304 V9HVZ6;Q92747;Q53GB6;A0A0K0K1L3;Q59GQ0;A0A1W2PNV4;Q92747-2 HEL-68;ARPC1A Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 3.5 0.5 1 1 34.217 34.267 2 0.0075922 7243 20230619_1883_Aki_TMTPro18x_K_F4 123.98 106.6 41671 23675 40297 48374 67119 73150 51040 47405 70615 49058 52173 53465 51544 44369 45117 37539 68039 51089 38448 21900 41498 47061 67196 71453 52963 50258 70054 49700 54367 53725 52358 45726 47202 38624 64760 48444 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31787000 19943 4304 18661 37820;37821 30312;30313 30313 2 9606 Homo sapiens -0.0778720936272066 NMSGSLYEMVSR Oxidation (M) 1388.6064 0.60643548 315 A0A024R4Z6;Q08945 SSRP1 FACT complex subunit SSRP1 yes no 0 1 0 7 0 1 48.396 48.482 2 0.00081663 12888 20230619_1887_Aki_TMTPro18x_K_F7 116.13 105.11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19944 315 18662 37822 30314 30314 191 1 9606 Homo sapiens -0.07232347982130705 NMSGSLYEMVSR Unmodified 1372.6115 0.61152086 315 A0A024R4Z6;Q08945 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 8 0 1 54.424 54.491 2 0.0023626 15485 20230619_1888_Aki_TMTPro18x_K_F8 96.23 84.636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19945 315 18662 37823 30315 30315 1 9606 Homo sapiens -0.05988044119521874 NMSIIDAFK Unmodified 1037.5216 0.52156686 229 A0A024R395;P49959;F8W7U8;P49959-3 MRE11A Double-strand break repair protein MRE11A yes no 0 0 0 1 0 1 61.714 61.714 3 0.00094284 19176 20230619_1880_Aki_TMTPro18x_K_F1 88.681 74.474 39979 35615 49267 52978 49071 53891 58414 52354 60460 60748 64102 67488 67024 57715 58439 71585 67524 74556 37059 32734 49302 52066 51195 54375 58414 53844 61630 61148 65747 67877 67915 60588 60153 71840 64567 70756 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15717000 19946 229 18663 37824 30316 30316 1 9606 Homo sapiens 0.004306943342498926 NMSIIDAFK Oxidation (M) 1053.5165 0.51648149 229 A0A024R395;P49959;F8W7U8;P49959-3 MRE11A Double-strand break repair protein MRE11A yes no 0 1 0 8 0 1 56.876 56.933 2 0.0075328 16526 20230619_1888_Aki_TMTPro18x_K_F8 85.355 44.368 63395 54212 60058 65658 64230 68880 72765 62404 66343 70505 79496 64722 70046 61463 70951 81282 79993 81142 58611 49721 61386 65407 66573 69275 72668 64454 68477 70645 80446 65940 71848 64558 72690 81319 76457 77067 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20949000 19947 229 18663 37825 30317 30317 140 1 9606 Homo sapiens -0.008136095283816758 NMSVIAHVDHGK Oxidation (M) 1322.6401 0.64011887 3447 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 1 0 6.4 1.02 1 2 1 1 34.532 34.578 4 0.0001184 7185 20230619_1887_Aki_TMTPro18x_K_F7 115.8 99.667 333560 273790 295190 321140 343280 321430 342540 358910 345370 361210 387000 381200 367360 301910 325720 358930 413770 382670 308150 251070 303850 320540 352320 326080 345630 364100 353470 365350 394190 383380 373560 317140 336970 361020 394830 363330 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 697060000 19948 3447 18664 37826;37827;37828;37829;37830 30318;30319;30320;30321;30322 30321 2092 5 9606 Homo sapiens -0.008295584280404 NMSVIAHVDHGK Unmodified 1306.6452 0.64520425 3447 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 0 0 7.2 0.748 1 2 2 36.746 36.793 4 8.4275E-10 9108 20230619_1887_Aki_TMTPro18x_K_F7 182.89 154.68 493510 412250 508900 502250 381460 534430 477760 503850 494980 589500 576650 572980 618260 497840 445620 555970 618660 656880 456510 378150 513820 500350 409690 537020 477110 519090 507000 590450 589390 579710 621360 519460 466330 563070 590520 622700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1276600000 19949 3447 18664 37831;37832;37833;37834;37835 30323;30324;30325 30323 3 9606 Homo sapiens 0.004147454345684309 NMSYQGFTK Oxidation (M) 1090.4753 0.47534495 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;Q9H8E3;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRU9 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 1 0 1 0 1 43.571 43.571 3 0.00039742 11693 20230619_1880_Aki_TMTPro18x_K_F1 112.13 94.617 87349 63169 90723 88200 105550 102290 103600 94486 129270 91695 111260 100970 104620 85154 108710 95125 111730 95648 80736 58061 92071 87190 108320 102200 105340 97022 129380 93187 114650 101590 107160 88899 110550 95520 106760 90900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93384000 19950 1603 18665 37836 30326 30326 1047 1 9606 Homo sapiens -0.06627370567844082 NMSYQGFTK Unmodified 1074.4804 0.48043033 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;Q9H8E3;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRU9 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 2 0 1 48.256 48.327 3 0.0028776 13658 20230619_1881_Aki_TMTPro18x_K_F2 84.817 71.155 308170 246150 316580 274490 268250 285130 305870 290440 389340 257210 268580 228340 291400 206740 304950 296550 315880 250190 284980 225640 319870 275250 283480 287750 308810 295510 386680 261120 282050 232700 297130 218880 310380 294010 301670 238360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 267840000 19951 1603 18665 37837 30327 30327 1 9606 Homo sapiens -0.05383066705235251 NMVHPNVICDGCNGPVVGTR Oxidation (M) 2210.9983 0.99832558 2889 E7EMC7;Q13501;E3W990;B4DE82;E3WH17;Q13501-2;C9JRJ8;E9PFW8;Q13502 SQSTM1;SQSTM1-ALK Sequestosome-1;Tyrosine-protein kinase receptor yes no 0 1 0 7 0 1 41.101 41.168 3 0.058964 9726 20230619_1887_Aki_TMTPro18x_K_F7 41.711 38.217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19952 2889 18666 37838 30328 30328 1717 1 9606 Homo sapiens -0.058733654164825566 NMVPQQALVIR Oxidation (M) 1283.702 0.70199085 3387;959 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z3F8;B4DHD7;M0QXF2;A0A0S2Z3D3;Q58I21;Q58I22;P05023;P05023-4;P05023-3;B7Z3V1;P05023-2;B3KRI1;B2RAQ4;P50993;B1AKY9;A0A0S2Z3W6;B3KW93;Q13733;Q5TC01;E9PRA5 ATP1A3;ATP1A2;ATP1A1;ATP1A4 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4 no no 0 1 0 1 0 1 45.825 45.825 2 0.00015114 12642 20230619_1880_Aki_TMTPro18x_K_F1 129.38 71.921 43609 36223 34279 45058 47342 53012 52773 54470 63429 53675 57501 52888 53036 41332 56305 56798 53873 61198 40256 33235 35870 44870 48327 53028 53200 55508 63742 54272 59058 53363 54398 43863 57070 57068 51620 58053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49675000 19953 959;3387 18667 37839 30329 30329 539 1 9606 Homo sapiens 0.07148792991074515 NMVPQQALVIR Unmodified 1267.7071 0.70707622 3387;959 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z3F8;B4DHD7;M0QXF2;A0A0S2Z3D3;Q58I21;Q58I22;P05023;P05023-4;P05023-3;B7Z3V1;P05023-2;B3KRI1;B2RAQ4;P50993;B1AKY9;A0A0S2Z3W6;B3KW93;Q13733;Q5TC01;E9PRA5 ATP1A3;ATP1A2;ATP1A1;ATP1A4 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4 no no 0 0 0 3 0 1 51.356 51.426 2 4.469E-06 14783 20230619_1882_Aki_TMTPro18x_K_F3 175.51 102.69 172950 147200 149360 171440 196410 245120 220770 202260 252990 226890 219620 186480 210210 172620 240310 210980 196960 204960 159780 134950 154600 172070 201240 241220 222030 210200 254540 226870 226360 190760 216180 180620 241290 211170 188930 194710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203140000 19954 959;3387 18667 37840 30330 30330 1 9606 Homo sapiens 0.08393096853706083 NMVQTAVVPVK Unmodified 1184.6587 0.65872905 3825 Q561W4;Q12972;A0A0A0MT09;Q38J66;Q12972-2 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay yes no 0 0 0 2 0 1 50.813 50.865 3 0.0017657 14842 20230619_1881_Aki_TMTPro18x_K_F2 83.397 52.107 56161 45236 55090 56626 61624 70719 62120 65413 84356 66891 71963 81094 75548 69203 64311 83903 82258 81315 51918 41511 56162 56435 63568 70308 63293 67218 84138 67995 74620 81274 76518 72513 66693 83880 78524 77264 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57153000 19955 3825 18668 37841 30331 30331 1 9606 Homo sapiens 0.07378603213805945 NMYELHK Oxidation (M) 949.43275 0.43275186 2403 B4DMT5;H0YDT6;B3KSH1;O00303;B4DEW9;Q9BX72;A0A7I2YQA0 EIF3F;IFP38 Eukaryotic translation initiation factor 3 subunit F yes no 0 1 0 6 0.816 1 1 1 38.018 38.096 3 0.01773 8698 20230619_1887_Aki_TMTPro18x_K_F7 72.485 54.449 192630 133490 152930 182800 193200 212560 202600 233060 261050 201580 235230 212010 234520 192190 192650 252510 262290 222710 177650 122690 159460 180900 197930 213090 205540 235700 261380 205800 242300 214330 237430 202070 200800 250940 250010 211990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 401730000 19956 2403 18669 37842;37843;37844 30332;30333 30333 1480 2 9606 Homo sapiens -0.04398720905408027 NMYELHK Unmodified 933.43784 0.43783723 2403 B4DMT5;H0YDT6;B3KSH1;O00303;B4DEW9;Q9BX72;A0A7I2YQA0 EIF3F;IFP38 Eukaryotic translation initiation factor 3 subunit F yes no 0 0 0 7 0 1 41.92 41.991 3 0.0047981 10063 20230619_1887_Aki_TMTPro18x_K_F7 109.21 47.014 199530 143370 180100 178060 179180 217960 198100 185510 258400 225580 240570 233920 262980 211080 197350 287890 297600 258040 184210 131620 184560 177500 187010 216580 200490 192850 259030 226220 248500 236460 264610 222550 207850 286120 283500 245550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198820000 19957 2403 18669 37845 30334 30334 1 9606 Homo sapiens -0.03154417042799196 NNAASEGVLASFFNSLLSK Unmodified 1967.9953 0.99525556 419 A0A024R6Z0;O43237-2;O43237;J3KRI4;J3KRZ2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 5 0 1 66.954 66.996 3 3.1628E-10 20975 20230619_1885_Aki_TMTPro18x_K_F5 126.4 107.99 7485.5 7457.6 7269.1 5767 5314.7 5903.5 5398.5 6410.7 6613.6 7523.3 7620.3 5559.2 8029.2 7106.1 7480.3 9773.8 8438.1 7254.6 6929.4 6811.9 7361.6 5978.4 5680.6 5979.9 5485.8 6539.2 6714.2 7483.9 7774.9 5799.4 8158.2 7417.2 7681.5 9631.4 8056.1 6921.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20629000 19958 419 18670 37846 30335 30335 1 9606 Homo sapiens 0.049977740643043944 NNALNPEEMR Oxidation (M) 1202.535 0.5349851 2495 B4DII5;B4DWX3;O60684;G1UI19;S4R3E5 KPNA6 Importin subunit alpha;Importin subunit alpha-7 yes no 0 1 0 2 0 1 34.348 34.405 2 0.01715 7408 20230619_1881_Aki_TMTPro18x_K_F2 70.908 63.702 19131 12332 15809 18729 15858 18980 17988 17101 25740 20567 21249 22059 24613 18305 20636 17809 24696 21809 17641 11352 16355 18379 16560 19120 18247 17701 25591 20660 22160 22183 24811 18999 21260 18140 23570 20682 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18860000 19959 2495 18671 37847 30336 30336 1525 1 9606 Homo sapiens -0.058180996244800554 NNALNQVVLWDK Unmodified 1412.7412 0.74121312 2807 D3DP46;P61009 SPCS3 Signal peptidase complex subunit 3 yes no 0 0 0 4.5 3.5 1 1 60.386 60.405 3 0.00061941 17957 20230619_1888_Aki_TMTPro18x_K_F8 75.088 61.887 62412 50568 64876 69957 50369 64252 60805 68836 72983 81811 76989 83918 84301 78478 75131 98543 85278 97428 57726 46453 65515 68973 53824 65477 61137 70344 73880 82028 79167 84912 85425 82161 77256 98570 81580 92505 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 365730000 19960 2807 18672 37848;37849 30337;30338 30338 2 9606 Homo sapiens 0.051352165463185884 NNASHVVYPVPGNLEEEEWVRPVMK Unmodified 2892.4229 0.42286246 645 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 0 0 1 7 0 1 56.544 56.602 4 1.935E-13 16437 20230619_1887_Aki_TMTPro18x_K_F7 137.89 121.09 38988 30353 39315 42147 33177 39541 35595 37545 45609 44548 50609 41299 53440 43480 42562 50182 47648 47239 36043 27888 39832 41551 35052 40124 36089 38687 46091 44563 51733 42194 53917 45145 43794 50137 45538 44901 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126980000 19961 645 18673 37850 30339 30339 1 9606 Homo sapiens 0.052347940869822196 NNASTDYDLSDK Unmodified 1341.5685 0.56845329 3567;2399 B3KS36;P39023;Q8TBW1;Q9NY85;G5E9G0;Q9BT63;Q49AJ9;B5MCW2 RPL3;rpl3 60S ribosomal protein L3 no no 0 0 0 3 0.816 1 1 1 43.834 43.899 2 1.8042E-13 11625 20230619_1881_Aki_TMTPro18x_K_F2 216.03 201.34 248010 212970 251780 267840 271990 297960 305140 280260 381720 378780 380150 355150 404440 355030 301750 374530 448670 363920 229430 195400 255890 266360 281870 298630 308030 290200 384550 376930 390850 361600 407340 367230 317110 375310 427280 346080 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 537200000 19962 2399;3567 18674 37851;37852;37853 30340;30341;30342 30340 3 9606 Homo sapiens -0.08866819371564816 NNAYLAQSPQLYK Unmodified 1508.7623 0.7623425 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 2 0 1 51.539 51.584 2 9.332E-07 15164 20230619_1881_Aki_TMTPro18x_K_F2 174.4 156.96 26132 21891 21724 25810 25497 32551 27335 25137 32769 22432 22853 18276 23470 17556 27805 21276 22160 20250 24133 20074 22523 25823 26289 32224 27607 26126 32651 22720 23923 18738 24121 18345 27849 21286 21244 19251 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14677000 19963 1207 18675 37854 30343 30343 1 9606 Homo sapiens 0.02831181855185605 NNDLCYWVPELVR Unmodified 1676.7981 0.79807608 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;A0A804HK69;A0A804HKU1 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 63.088 63.116 2 2.6549E-10 19247 20230619_1887_Aki_TMTPro18x_K_F7 173.72 156.4 311670 236770 285580 273610 212830 256100 294840 283750 305040 376570 334790 362200 369960 336950 345790 439760 367650 393430 287870 217150 291130 273240 229220 260960 292970 290490 311750 375010 343880 367460 375490 353690 353800 437410 351740 374080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 344860000 19964 1736 18676 37855;37856 30344;30345 30344 2 9606 Homo sapiens -0.0132510395949339 NNEESPTATVAEQGEDITSK Unmodified 2118.9553 0.95530082 3853 Q53GX4;Q2TA84;Q13451;Q13451-2 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes no 0 0 0 1 0 1 48.19 48.19 3 1.7029999999999999E-22 13603 20230619_1880_Aki_TMTPro18x_K_F1 180.8 157.93 31955 26230 26845 31113 25495 29685 31521 31230 41712 36142 35185 40041 45652 38175 33664 45454 44841 45744 29509 24056 27704 31004 26792 30163 31742 31937 41652 36398 36885 40405 45701 39827 35123 45542 42801 43441 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51627000 19965 3853 18677 37857 30346 30346 1 9606 Homo sapiens -0.05941862187592051 NNEPLTHAMYNLASLR Unmodified 1842.9047 0.90466641 3081 H7BXY3;Q7L2E3-3;Q7L2E3;Q7L2E3-2 DHX30 Putative ATP-dependent RNA helicase DHX30 yes no 0 0 0 2 0 1 55.544 55.565 3 1.4101E-42 16823 20230619_1881_Aki_TMTPro18x_K_F2 219.85 197.28 35629 28400 34065 35325 31710 38000 36990 37281 41618 40379 34047 34493 39201 37887 42248 40582 42023 41788 32928 26061 34710 35144 33295 38199 37137 38215 41856 40474 35536 35395 40026 39103 42884 40816 40208 39678 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15008000 19966 3081 18678 37858 30347 30347 1 9606 Homo sapiens 0.016930265350765694 NNFAVGYR Unmodified 939.45626 0.45626449 62 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;P45880-2;P45880-1;B4DKM5;Q5JSD2;Q5JSD1 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 3.67 3.09 1 1 1 41.446 41.471 2 0.00015014 10716 20230619_1880_Aki_TMTPro18x_K_F1 173.38 107.71 1265300 1188400 1222800 1383400 1447200 1648000 1698700 1604100 2158000 1506700 1716400 1527300 1837300 1525300 1441000 1514300 1531300 1232500 1170800 1089200 1250400 1384600 1493200 1645400 1711300 1639300 2152400 1530300 1785300 1550300 1852300 1572600 1477500 1506500 1462200 1174700 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1392600000 19967 62 18679 37859;37860;37861 30348;30349;30350;30351;30352 30349 5 9606 Homo sapiens -0.015885390765788543 NNFEGEVTK Unmodified 1036.4825 0.48253882 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;A0A7P0Z4J0;B4DJS0;A0A7P0Z4S2 P4HB Protein disulfide-isomerase yes no 0 0 0 3.5 0.5 2 2 43.526 43.582 2;3 0.00013969 11088 20230619_1883_Aki_TMTPro18x_K_F4 170.69 126.87 631400 531470 595080 537260 682820 718430 691200 683510 1084800 730010 831180 791930 770660 661420 742880 804770 962500 750910 583660 486670 608470 544960 703090 712280 708280 701730 1071400 738010 861660 796980 787590 693990 768270 803310 917330 714560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1204900000 19968 537 18680 37862;37863;37864;37865 30353;30354 30354 2 9606 Homo sapiens -0.03424314695780595 NNFSDGFR Unmodified 955.41479 0.41479361 1578 A0A5F9ZHN7;Q9NTJ5;E9PGZ4;B4DVV3;Q9NTJ5-2;C9JV50;B3KX17 SACM1L Phosphatidylinositide phosphatase SAC1 yes no 0 0 0 5 0 1 41.959 42.044 2 0.018224 10369 20230619_1885_Aki_TMTPro18x_K_F5 90.601 73.236 54355 44785 48340 54552 48699 52428 62215 51343 80644 58579 64444 69551 70710 72047 63856 77347 85514 82704 50217 41083 49656 54261 50947 53164 62465 52773 80384 59222 67189 70206 71761 74463 66321 77906 81590 78506 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29934000 19969 1578 18681 37866 30355 30355 1 9606 Homo sapiens -0.06469719835899923 NNIADYALSAGTTAMNAQR Unmodified 1980.9323 0.93233773 4594 Q9NU22 MDN1 Midasin yes yes 0 0 0 2 0 1 59.733 59.746 3 0.0021891 18510 20230619_1881_Aki_TMTPro18x_K_F2 65.085 54.451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19970 4594 18682 37867 30356 30356 1 9606 Homo sapiens -0.018891149953788045 NNIDVCPECGHLK Unmodified 1554.6919 0.69189644 1939 A4D1V4;Q9BYC8 MRPL32 39S ribosomal protein L32, mitochondrial yes no 0 0 0 5 0 1 42.772 42.855 3 6.0238E-05 10681 20230619_1885_Aki_TMTPro18x_K_F5 109.84 87.64 102790 87733 109170 109420 111380 120690 118470 118820 217850 109010 117060 113450 130690 110360 110350 133090 130490 102770 95119 80489 110400 108890 115870 121150 122010 121250 211920 111100 125360 114950 132050 115090 113800 131640 124460 98031 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84175000 19971 1939 18683 37868 30357 30357 1 9606 Homo sapiens -0.06326182796442481 NNIIQTWR Unmodified 1043.5512 0.55122751 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4;A0A6Q8PHI7;H7C443;A0A6Q8PFZ6;A0A6Q8PF45;A0A6Q8PH49;A0A6Q8PGN7;F8WCK4;A0A6Q8PGZ9;A0A6Q8PFV5 GARS Glycine--tRNA ligase yes no 0 0 0 3 0 1 47.753 47.833 2 0.014489 13167 20230619_1882_Aki_TMTPro18x_K_F3 106.94 86.42 461490 411230 394960 418980 427660 535700 501060 498340 626330 340410 342100 333650 339500 297060 429890 363480 405560 333980 426460 376520 407520 424240 444440 531940 504540 507410 618690 352870 364440 338020 351090 311070 433810 362810 387780 317790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109840000 19972 3576 18684 37869 30358 30358 1 9606 Homo sapiens 0.031193943945936553 NNIPYFETSAK Unmodified 1282.6194 0.61936665 1257 A0A158RFU6;P51149;A0A6Q8PG52;A0A6Q8PH84;C9J8S3;A0A6Q8PGE6;B4DPH9;C9J4V0 RAB7A Ras-related protein Rab-7a yes no 0 0 0 7.5 0.5 1 1 52.342 52.418 3 1.5077E-07 14549 20230619_1888_Aki_TMTPro18x_K_F8 145.91 123.38 430980 366260 372210 450500 338470 409570 425190 392780 479030 524220 543730 456870 571680 493180 503840 530400 507490 544520 398160 335980 383010 447420 357030 416870 425380 406140 487720 520780 555420 468360 579290 509610 513900 533180 485780 516900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1255500000 19973 1257 18685 37870;37871 30359 30359 1 9606 Homo sapiens -0.010638255360618132 NNLAGAEELFAR Unmodified 1303.6521 0.65206377 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 4.5 0.5 1 1 55.576 55.612 2 1.6354E-18 16459 20230619_1883_Aki_TMTPro18x_K_F4 241.63 206.19 630740 576620 541990 573590 484780 571070 586340 603070 731630 771470 685760 648170 802870 666570 679270 825360 696380 696720 582980 527790 557310 579930 511530 578700 589920 618260 735810 766940 710540 664410 809690 695390 694660 819300 666130 663110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 633720000 19974 826 18686 37872;37873 30360;30361 30360 2 9606 Homo sapiens 0.012383815867906378 NNLCPSGSNIISNLFK Unmodified 1776.8829 0.88286834 715 E9PJK1;E9PRJ8;H0YDL9;H0YDJ9;A0A024RCB7;E9PIF1;A6NMH8;H0YEE2;P60033 CD81 Tetraspanin;CD81 antigen yes no 0 0 0 5 0.816 1 1 1 62.993 63.027 3 1.7367E-14 19578 20230619_1883_Aki_TMTPro18x_K_F4 176.19 130.76 102310 81362 95439 106630 93881 116770 126200 117840 160440 121060 89887 83026 135910 98439 82836 132910 118650 121420 94532 74702 97606 105720 98667 117280 126330 120390 158670 121140 97456 86607 134680 102970 87417 132200 113190 115440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 514040000 19975 715 18687 37874;37875;37876 30362;30363 30362 2 9606 Homo sapiens 0.025502217864868726 NNLNPTWK Unmodified 985.49813 0.49812931 2180 Q99829;B0QZ18;F2Z2V0;A6PVH9;E7ENH5;Q59EI4;Q5JX58;Q5JX59;Q5JX45;Q5JX60;Q5JX44;Q5JX52;Q5JX61 CPNE1 Copine-1 yes no 0 0 0 1.5 0.5 1 1 47.137 47.174 2 0.0021376 13136 20230619_1881_Aki_TMTPro18x_K_F2 143.28 100.22 98835 92342 97823 83618 103170 117140 120850 105420 134540 120940 124150 102100 124440 109640 116940 106220 138280 124850 91463 84456 99471 85710 107240 115700 121200 108910 135830 120900 127740 104800 126690 112720 120150 107880 132000 118440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119970000 19976 2180 18688 37877;37878 30364 30364 1 9606 Homo sapiens 0.004800166119366622 NNLSYDCIGR Unmodified 1210.5401 0.54007047 79 Q8N995;A0A024R059;Q01581;D6RIW1 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 43.006 43.093 2 1.4866E-06 10812 20230619_1886_Aki_TMTPro18x_K_F6 200.86 171.44 485180 415130 411940 389890 138150 169740 285230 274770 311260 471560 328320 182900 463000 275020 154850 664800 414990 211320 448200 379890 420200 393530 169470 191190 280310 278880 317210 456990 340490 203010 453100 301340 180020 634820 393140 206270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 322990000 19977 79 18689 37879;37880 30365;30366 30366 2 9606 Homo sapiens -0.05677795761857851 NNNDNIFLSPLSISTAFAMTK Unmodified 2297.1362 0.13618249 2788 CON__P41361 yes yes 0 0 0 4 0 1 65.911 65.922 3 0.0068432 20799 20230619_1883_Aki_TMTPro18x_K_F4 60.602 51.556 + 983.65 0 969.66 1712.1 1088.6 1758.2 0 1324 1121.2 2039.3 5263.8 6676.1 2267.6 2438.6 4774.7 1721.2 2901.3 5209.6 903.77 0 991.77 1583 1099.9 1759.1 0 1401.5 1238.7 2157.5 5086.1 6413.6 2527.1 2615.7 4692 1945.9 2810 4902.7 1 0 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 3902200 19978 2788 18690 37881 30367 30367 1 0.03949984655446315 NNNIDAAIENIENMLTSENK Unmodified 2246.0485 0.048489695 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;A0A804HJI0;A0A804HJA1;A0A804HKK7 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 6 0.816 1 1 1 66.338 66.374 3 1.1992999999999998E-22 20701 20230619_1885_Aki_TMTPro18x_K_F5 184.8 170.54 20791 17690 20583 19171 16466 20694 18250 23467 22589 22584 23771 24022 24391 25386 25034 26480 26608 26082 19228 16208 20855 19276 17505 20873 18458 23741 22817 22913 24367 24376 24938 26176 25540 26571 25440 24779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70286000 19979 1723 18691 37882;37883;37884 30368 30368 1 9606 Homo sapiens -0.0246926100599012 NNNQQLAQLQK Unmodified 1297.6739 0.67386184 4706 Q9Y2A7;Q9Y2A7-2 NCKAP1 Nck-associated protein 1 yes no 0 0 0 8 0 1 43.089 43.099 3 1.1601E-06 10739 20230619_1888_Aki_TMTPro18x_K_F8 160.75 137.38 31078 22985 28859 28449 35165 39993 36673 37320 46477 34308 40750 31882 37099 27786 35687 36356 39692 34407 28702 21097 29598 28436 36096 39496 37183 38212 46514 34786 41856 32383 37892 29268 36536 36287 37902 32720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38362000 19980 4706 18692 37885 30369 30369 1 9606 Homo sapiens 0.036931863353629524 NNPDIPELHRPVVK Unmodified 1626.8842 0.88418897 2626 B4DYZ1;Q9H8H2;Q9H8H2-2;Q9H8H2-4;B4E3G7;Q9H8H2-3 DDX31 Probable ATP-dependent RNA helicase DDX31 yes no 0 0 1 7.5 0.5 1 1 42.564 42.603 4 0.0028802 10575 20230619_1888_Aki_TMTPro18x_K_F8 77.776 71.195 28869 23310 29846 29286 32230 39411 31987 32271 44896 39125 37119 42443 44440 36120 34157 36218 45412 40422 26700 21391 30274 29215 33334 38909 32663 33637 44700 39297 38793 42682 44637 37485 35541 36630 43306 38367 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69092000 19981 2626 18693 37886;37887 30370 30370 1 9606 Homo sapiens 0.09582223937513845 NNPDLYLK Unmodified 975.50255 0.50254598 2876 G5EA19;U3KQS5;E5RG17;Q6P1N9;H0YBX2;E5RGF2;A0A0D9SGD3;Q6P1N9-2;E5RG62;E5RK70 TATDN1 Putative deoxyribonuclease TATDN1 yes no 0 0 0 6.5 0.5 2 2 48.702 48.785 2;3 0.0010455 13389 20230619_1886_Aki_TMTPro18x_K_F6 150.24 75.134 266840 230160 260900 269410 255950 296590 286470 281670 312450 316810 301140 295820 297530 246270 297940 337340 335150 303160 246780 211020 265520 269270 267190 297520 287930 289720 316500 317630 309370 299630 303810 260490 305220 335510 320090 288420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 282880000 19982 2876 18694 37888;37889;37890;37891 30371;30372 30371 2 9606 Homo sapiens 0.013814810348549145 NNPEPWNK Unmodified 997.46174 0.4617438 600 A0A024R9Z0;O00483 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes no 0 0 0 5.5 0.5 1 1 43.973 44.059 2 0.0033183 11245 20230619_1886_Aki_TMTPro18x_K_F6 131.22 99.85 204830 170950 213920 204800 263490 281320 271000 294550 385330 231650 266870 261280 263040 247950 228940 266680 341710 280490 189500 156790 217260 205140 270060 278960 276250 298150 380810 238700 279110 263600 267330 257100 239800 268380 325430 266490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290450000 19983 600 18695 37892;37893 30373;30374 30374 2 9606 Homo sapiens -0.03708860284768889 NNPHYDPSSK Unmodified 1157.5102 0.51015055 253 A0A024R3M1;Q9P016;Q9P016-2 THYN1 Thymocyte nuclear protein 1 yes no 0 0 0 5 0 1 32.792 32.874 3 0.0021431 6772 20230619_1885_Aki_TMTPro18x_K_F5 84.31 65.999 12755 5814 13877 16021 22130 24101 17807 19820 21640 16394 24229 34051 24087 26825 20244 15724 36915 35367 11770 5416.2 14141 15418 22217 23635 18327 20450 21910 17298 24792 33470 24466 27309 21544 17097 35148 33389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30804000 19984 253 18696 37894 30375 30375 1 9606 Homo sapiens -0.06230411435535643 NNPPTIVHDK Unmodified 1133.5829 0.58292157 2517 O60784-2;O60784;O60784-3;B4DKQ5;O60784-4;B4DJ44;B0QY01;Q6UW50;H7BYN7;V9GYF4;B0QY02;V9GZ68;B3KUU1 TOM1 Target of Myb protein 1 yes no 0 0 0 6 0 1 36.713 36.781 3 0.00012575 8263 20230619_1886_Aki_TMTPro18x_K_F6 125.28 100.43 47390 35917 44481 52135 61117 66901 57773 67038 89752 64378 68751 59855 64797 59623 59735 62621 77604 67452 43778 33021 45727 51487 62140 66508 59418 68353 88706 65129 71276 60994 66078 61666 61828 63149 74008 64052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42846000 19985 2517 18697 37895 30376 30376 1 9606 Homo sapiens 0.021473423578981965 NNPPTLEGNYSK Unmodified 1332.631 0.63099397 2575 Q9Y6E0;Q5U0E6;Q9Y6E0-2;Q6P0Y1;B4DT57;B4DR80;B4DMR0;Q6FG81;H0Y630;Q5JV98 STK24;HEL-S-95 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit yes no 0 0 0 5.5 0.5 1 1 44.115 44.201 3 4.4405E-07 11307 20230619_1886_Aki_TMTPro18x_K_F6 153.52 137.67 437900 277610 372130 403000 508800 463530 468560 473650 482900 448230 491070 408380 561450 449510 402520 411380 569370 438670 403840 255430 385620 397380 515930 464470 475220 482400 491570 453250 505820 418030 563150 460570 421270 415620 542250 416840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239670000 19986 2575 18698 37896;37897 30377 30377 1 9606 Homo sapiens -0.022016285127165247 NNPWLCTE Unmodified 1032.4335 0.43348014 3875 Q14141 SEPT6 Septin-6 yes yes 0 0 0 3.5 0.5 1 1 56.13 56.153 2 0.049271 16867 20230619_1882_Aki_TMTPro18x_K_F3 71.141 64.777 51007 38316 39160 43982 43497 42946 51179 50455 54511 56994 49916 48039 56839 43686 50767 56781 59250 54697 47050 35141 40858 43956 45029 43702 51251 51194 55202 56962 51725 49031 57481 45931 52228 56715 56577 51990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35449000 19987 3875 18699 37898;37899 30378 30378 1 9606 Homo sapiens -0.08143926256343548 NNQFQALLQYADPVSAQHAK Unmodified 2242.1131 0.11307928 1159;1980 P26599;P26599-2;A0A0U1RRM4;P26599-1;A0A7I2V621;A0A7I2V4H6;A0A6Q8PEX4;K7EK45;Q59H49;K7EKJ7;A0A087WU68;A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 no no 0 0 0 2 0 2 61.187 61.198 3;4 4.0337E-16 19130 20230619_1881_Aki_TMTPro18x_K_F2 154.49 140.62 765840 883700 856240 818510 747470 690470 789010 814890 735040 969850 885300 915940 893980 789040 745760 854950 913560 1110900 710660 807860 860150 831360 784510 711960 792240 828120 759180 969450 901780 927390 905310 822040 770880 872030 873830 1051700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2716600000 19988 1159;1980 18700 37900;37901 30379;30380 30379 2 9606 Homo sapiens 0.04170726653001111 NNQGTVNWSVDDIVK Unmodified 1687.8166 0.81656291 1653 A0A7I2V351;A0A7I2V487;Q7Z726;A8K7D9;A0A7I2YQE1;P52292;A0A7I2V3Z3;J3QLL0;J3KS65 KPNA2 Importin subunit alpha;Importin subunit alpha-1 yes no 0 0 0 5 0 1 58.054 58.11 3 0.00044309 17120 20230619_1885_Aki_TMTPro18x_K_F5 81.448 64.451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19989 1653 18701 37902 30381 30381 1 9606 Homo sapiens 0.00016729216054045537 NNQNPWTFER Unmodified 1304.5898 0.58979786 4616 Q9NX20 MRPL16 39S ribosomal protein L16, mitochondrial yes yes 0 0 0 7 0 1 47.387 47.475 2 0.00036059 12405 20230619_1887_Aki_TMTPro18x_K_F7 129.63 92.932 45862 37752 44721 51488 55704 60036 57111 59717 69744 51689 56700 50776 57777 56131 56767 61186 62013 54673 42400 34673 45733 50965 57035 60040 57880 60800 69761 52688 58802 51825 58945 57952 58054 61039 59232 52025 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94998000 19990 4616 18702 37903 30382 30382 1 9606 Homo sapiens -0.05031344761550827 NNRPSEGPLQTR Unmodified 1367.6906 0.69057454 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 1 6.17 1.34 1 1 1 2 1 29.161 29.23 3 1.3817E-09 4907 20230619_1887_Aki_TMTPro18x_K_F7 173.72 150.8 112280 86603 91016 89867 97273 101190 103950 101720 149910 121590 137440 118420 138680 105750 102180 143950 145140 120660 103620 79348 94302 90704 100810 101540 105830 104400 149510 121790 141450 120050 139730 111540 107140 142620 138290 114940 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1201000000 19991 826 18703 37904;37905;37906;37907;37908;37909 30383;30384;30385;30386 30385 4 9606 Homo sapiens 0.021436872213143943 NNSFVNEIISR Unmodified 1291.6521 0.65206377 3585 P43246;P43246-2;B4DN49;B4DL39;B4DSB9 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 7.5 0.5 1 1 54.494 54.56 2 1.7342E-08 15496 20230619_1888_Aki_TMTPro18x_K_F8 175.54 136.31 128240 109160 117910 124580 98677 130280 121770 120020 147560 133740 126760 117110 132840 117560 118030 139300 127900 123370 118530 100060 120410 124650 104870 131050 122260 123710 148020 133980 131220 119700 134720 122370 120950 138690 122250 117360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 243850000 19992 3585 18704 37910;37911 30387 30387 1 9606 Homo sapiens 0.017903815868066886 NNSGEEFDCAFR Unmodified 1444.5677 0.56774179 3813 Q08J23-2;Q08J23;Q08J23-3 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 0 0 0 2 0 1 45.904 45.985 2 0.0037897 12579 20230619_1881_Aki_TMTPro18x_K_F2 87.641 81.537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19993 3813 18705 37912 30388 30388 1 9606 Homo sapiens -0.13675937292305207 NNSGLSFEELYR Unmodified 1427.6681 0.66810776 283 Q53S54;A0A024R475;Q13618-2;Q13618;A0A087X1R9;H7C1L6 CUL3 Cullin-3 yes no 0 0 0 5.5 0.5 1 1 54.598 54.67 2 3.3446E-05 15688 20230619_1885_Aki_TMTPro18x_K_F5 161.93 141.6 167150 138200 154650 157930 152300 162070 156180 169020 204260 208490 205420 200140 227890 193580 191830 219650 206530 217860 154470 126690 158100 158000 158560 163800 158820 173200 205510 208350 211610 203340 230150 201300 196670 220150 197540 206900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 125220000 19994 283 18706 37913;37914 30389;30390;30391 30389 3 9606 Homo sapiens -0.0286195696694449 NNSNDIVNAIMELTM 2 Oxidation (M) 1709.76 0.76003559 648 F8VZJ2;A0A7I2V2K5;A0A024RB41;H0YHX9;A0A7I2V473;Q13765;E9PAV3-2;E9PAV3;B4DDI8 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 2 0 5.5 0.5 1 1 66.173 66.216 3 6.6739E-08 20636 20230619_1885_Aki_TMTPro18x_K_F5 131.66 116.24 12719 8263.6 9415.8 14012 12448 13276 12196 11301 11438 15505 14152 14728 15897 13177 12167 18130 14912 13951 11720 7617.6 9912 13651 12684 13430 12287 11802 11829 15415 14470 14935 15990 13901 12622 17889 14235 13299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31187000 19995 648 18707 37915;37916 30392;30393 30392 388;389 2 9606 Homo sapiens -0.06645402727099281 NNSNDIVNAIMELTM Oxidation (M) 1693.7651 0.76512097 648 F8VZJ2;A0A7I2V2K5;A0A024RB41;H0YHX9;A0A7I2V473;Q13765;E9PAV3-2;E9PAV3;B4DDI8 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 1 0 6 0.816 4 4 4 67.647 67.683 2;3 5.9614E-19 21380 20230619_1887_Aki_TMTPro18x_K_F7 203.29 190.11 42979 109460 42277 34649 43258 37382 43488 42070 52625 42707 47128 40932 45164 42537 45238 47884 43609 40635 40261 99416 42952 40556 44791 37902 44124 42666 52844 43097 48489 41726 46187 44079 45925 47629 41720 38683 7 7 7 6 7 7 7 7 7 7 7 7 7 7 7 7 7 7 239150000 19996 648 18707 37917;37918;37919;37920;37921;37922;37923;37924;37925;37926;37927;37928 30394;30395;30396;30397;30398;30399;30400 30400 388;389 7 9606 Homo sapiens -0.0540109886449045 NNSNDIVNAIMELTM Unmodified 1677.7702 0.77020634 648 F8VZJ2;A0A7I2V2K5;A0A024RB41;H0YHX9;A0A7I2V473;Q13765;E9PAV3-2;E9PAV3;B4DDI8 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 0 0 6 0.816 1 1 1 69.524 69.56 2 4.0517E-05 21886 20230619_1887_Aki_TMTPro18x_K_F7 112.13 95.991 2792.1 3941.1 3589.1 2438.1 3293.4 3306.7 6308.2 3212.5 4212.3 6961.9 4956.7 4162.9 4894.4 5719.2 5010.4 7329.6 6280.1 5119.2 2583.9 3588.6 3469.5 2604.4 3465.7 3261.2 6111.8 3256.4 4310.3 6748.5 5045.5 4407.8 4980.1 5925.6 5169.7 7209.8 5988.4 4879.3 2 2 2 2 2 2 3 2 2 3 3 3 2 3 2 3 2 2 51636000 19997 648 18707 37929;37930;37931 30401;30402;30403 30403 3 9606 Homo sapiens -0.04156795001881619 NNSVWNQR Unmodified 1016.4788 0.47879085 2821 E9PQP6;D3DSY9;P49354;B3KVN2;P49354-2 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha yes no 0 0 0 8 0 1 36.132 36.119 2 0.02478 7929 20230619_1888_Aki_TMTPro18x_K_F8 84.743 69.081 27489 24555 28313 29823 36576 36708 31627 35299 51805 20262 21418 16613 16731 15733 26536 18805 26242 13190 25439 22518 28820 29778 37214 36570 32782 35741 50319 21238 23179 17032 17720 16408 26746 18564 25021 12636 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31532000 19998 2821 18708 37932 30404 30404 1 9606 Homo sapiens -0.028789396789534294 NNTALQSVSLR Unmodified 1201.6415 0.64149908 1584 A0A8Q3SIN5;D3DVA5;V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;B4DJ49;B7Z977;V9GYF5;V9GYG5;V9GZ14;V9GZ58 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 0 0 0 1 0 1 43.536 43.536 2 0.00099428 11665 20230619_1880_Aki_TMTPro18x_K_F1 104.3 60.855 58774 49351 51024 55968 64944 70307 60266 58305 74268 61659 61016 64244 64615 54491 60379 57725 73713 63354 54296 45237 52712 56165 66262 69747 61453 60486 74330 62251 63408 64740 65649 56713 62185 58288 70328 60152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24145000 19999 1584 18709 37933 30405 30405 1 9606 Homo sapiens 0.04874398932361146 NNTGGSTGLPR Unmodified 1072.5261 0.52613497 2330 I3L2J8;B2RN10;Q9UPN4-3;Q9UPN4-2;Q9UPN4 CEP131;AZI1 Centrosomal protein of 131 kDa yes no 0 0 0 6.5 0.5 1 1 31.688 31.754 2 0.0012438 6451 20230619_1886_Aki_TMTPro18x_K_F6 98.249 50.342 8571.2 5662 10629 9128.5 13124 15556 12377 12389 16238 10621 17934 17382 9501.8 17858 14154 5682.6 15372 15297 7931.8 5215.4 10657 9013.8 13424 15160 12643 12826 16352 11053 17952 17340 10252 17727 14331 6479.1 14695 14428 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5314100 20000 2330 18710 37934;37935 30406 30406 1 9606 Homo sapiens -0.007227051986319566 NNTQVLINCR Unmodified 1230.6139 0.61390412 3719 P62316;P62316-2;K7ERG4 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 0 0 0 4.5 3.5 1 1 39.706 39.7 2 7.1043E-14 9326 20230619_1888_Aki_TMTPro18x_K_F8 234.81 202.94 349100 303120 260960 280690 371960 431530 345690 330570 564590 214680 203410 167330 188870 179700 260170 212190 238140 148630 322260 277350 274240 287410 377710 422710 356370 341520 547280 222640 224910 172700 196930 186530 261790 209360 227450 142170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 619890000 20001 3719 18711 37936;37937 30407;30408 30408 2 9606 Homo sapiens 0.007821724004770658 NNTVGLIQLNRPK Unmodified 1465.8365 0.83651049 1410 A0A384MDW7;P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes no 0 0 1 5.33 0.471 2 1 46.846 46.925 3;4 2.1941E-15 12423 20230619_1885_Aki_TMTPro18x_K_F5 197.68 170.72 459230 408280 437130 486430 450730 520230 640650 604590 730050 583760 593610 532080 615370 538220 593410 617660 629570 593080 424700 374350 446600 485410 472400 525370 637310 611230 732660 589790 616090 543080 626510 559170 605920 618030 601760 563700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 917880000 20002 1410 18712 37938;37939;37940 30409;30410;30411 30409 3 9606 Homo sapiens 0.12222569737355116 NNTVTPGGKPNK Unmodified 1225.6415 0.64149908 2764 C9K025;P18077 RPL35A 60S ribosomal protein L35a yes no 0 0 1 2.5 0.5 1 1 36.146 36.203 3 0.0031255 8074 20230619_1882_Aki_TMTPro18x_K_F3 74.216 62.239 35099 19537 43172 43336 68120 69165 52337 69785 54288 44213 60593 64003 52640 52705 66109 33594 70595 62449 32452 18100 43554 42108 68284 67944 53794 70488 55413 46644 61581 63659 54671 53724 67045 35795 67445 59038 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177470000 20003 2764 18713 37941;37942 30412 30412 1 9606 Homo sapiens 0.03770398932374519 NNVAFMSYFLQGK Oxidation (M) 1533.7286 0.72859953 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258 COPB2 Coatomer subunit beta' yes no 0 1 0 4 0 1 60.54 60.542 3 0.00018588 18562 20230619_1883_Aki_TMTPro18x_K_F4 95.417 57.219 28106 22622 23888 28585 28119 26655 30327 27014 37644 29830 26348 26626 27665 23697 28061 34872 36810 30601 25954 20761 24705 28348 28917 27123 30655 27664 37475 29917 27630 27087 28233 25128 29046 34602 35092 29133 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18364000 20004 3031 18714 37943 30413 30413 1783 1 9606 Homo sapiens -0.01691562908240485 NNVEQDLK Unmodified 958.47197 0.47197413 1877 B3KR37;B7Z240;A0A994J5W4;Q7Z5V0;B1AUU8;A0A994J5J3;A0A994J5A3;P42566-2;P42566 EPS15 Epidermal growth factor receptor substrate 15 yes no 0 0 0 3 0 1 42.258 42.32 2 0.00072991 10599 20230619_1882_Aki_TMTPro18x_K_F3 133.57 71.374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20005 1877 18715 37944 30414 30414 1 9606 Homo sapiens -0.008922973501967135 NNVVINYK Unmodified 962.51853 0.5185304 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 1.5 0.5 1 1 46.166 46.206 2;3 4.6838E-09 12652 20230619_1881_Aki_TMTPro18x_K_F2 196.86 155.94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20006 1863 18716 37945;37946 30415;30416 30416 2 9606 Homo sapiens 0.03577187271741877 NNWEVSALSR Unmodified 1174.5731 0.57308516 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 6.5 0.5 1 1 48.532 48.614 2 2.4739E-05 13297 20230619_1886_Aki_TMTPro18x_K_F6 161.51 102.16 474410 449880 459930 462640 409120 534260 504640 548290 629780 595400 566630 552210 663880 545800 532110 633350 648620 606320 439000 411850 467790 467440 432400 535120 507290 560160 632070 598010 588360 562440 668200 567970 550350 633290 619180 576330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 590140000 20007 3758 18717 37947;37948 30417;30418 30417 2 9606 Homo sapiens -0.007218456474902268 NNWNDVDDFNWLAR Unmodified 1777.7808 0.78084611 3943 Q15814 TBCC Tubulin-specific chaperone C yes yes 0 0 0 5 0 1 63.034 63.081 2 0.00014771 19342 20230619_1885_Aki_TMTPro18x_K_F5 103.44 93.114 33245 27778 31764 36689 28611 34302 31664 32097 41208 34671 40254 39657 36540 39102 37460 34041 37801 40316 30733 25502 32372 36278 30092 34809 32055 33027 41370 35076 41181 40006 37507 40056 38076 34661 36182 38217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16759000 20008 3943 18718 37949 30419 30419 1 9606 Homo sapiens -0.0769330824091412 NNYENYIDIVK Unmodified 1383.667 0.66704513 4056 Q5SY16 NOL9 Polynucleotide 5'-hydroxyl-kinase NOL9 yes yes 0 0 0 6 0 1 58.37 58.439 3 0.0027467 17503 20230619_1886_Aki_TMTPro18x_K_F6 73.848 45.215 25392 23731 26150 28205 24816 32004 30688 28632 43739 32221 31216 31577 33996 31745 29498 37552 31432 35365 23506 21754 26502 28166 26095 31988 30988 29585 43286 32390 32735 32100 34421 33033 30228 37498 30083 33599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51817000 20009 4056 18719 37950 30420 30420 1 9606 Homo sapiens -0.009441713358683046 NPADLPK Unmodified 753.4021 0.40210366 3447 P13639;Q8TA90;Q6PK56 EEF2 Elongation factor 2 yes no 0 0 0 5 0.816 1 1 1 42.554 42.627 2 0.040181 10583 20230619_1885_Aki_TMTPro18x_K_F5 94.302 35.097 603010 331330 649580 605200 738830 787070 675220 710830 752330 663390 899380 866100 901150 749990 786090 449550 961890 813440 556800 306020 656990 590720 758360 779910 687300 730060 767460 679310 915590 865540 914030 762130 809040 478230 917610 769290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1666099999.9999998 20010 3447 18720 37951;37952;37953 30421;30422;30423 30422 3 9606 Homo sapiens 0.015538687718617439 NPAEPIAVQNNQQLALK Unmodified 1846.9901 0.9901106 4602 Q9NVH2-4;Q9NVH2-3;Q9NVH2-2;Q9NVH2 INTS7 Integrator complex subunit 7 yes no 0 0 0 8 0 1 52.814 52.889 3 0.0027632 14794 20230619_1888_Aki_TMTPro18x_K_F8 63.145 43.541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20011 4602 18721 37954 30424 30424 1 9606 Homo sapiens 0.10049514992397235 NPAPGVLTNK Unmodified 1009.5556 0.55564418 2270 B2R9B8;H0YAP0;Q96GY0;A0A994J504 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes no 0 0 0 1 0 1 44.745 44.745 3 0.0030269 12188 20230619_1880_Aki_TMTPro18x_K_F1 77.062 45.128 56360 48849 54255 57373 62610 67470 66156 61761 75992 58017 72560 75110 72896 66293 63390 69981 82313 81079 52118 44787 55436 57378 64466 67339 66787 63412 76647 59397 74633 75188 73985 68854 65704 70872 78565 76896 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92952000 20012 2270 18722 37955 30425 30425 1 9606 Homo sapiens 0.05124858817509903 NPAPPIDAVEQILPTLVR Unmodified 1942.0888 0.088762013 1653 A0A7I2V351;A0A7I2V487;Q7Z726;A8K7D9;A0A7I2YQE1;P52292;A0A7I2V3Z3 KPNA2 Importin subunit alpha;Importin subunit alpha-1 yes no 0 0 0 4.5 3.5 1 1 65.156 65.166 3 1.8622E-48 19964 20230619_1888_Aki_TMTPro18x_K_F8 220.64 202.51 23040 19508 22992 21779 18746 24298 22786 24201 31193 27087 22806 22024 29213 22426 19318 33154 26465 24986 21309 17879 23293 21854 19960 24373 23006 24798 30971 27080 24055 22621 29137 23691 20289 32644 25242 23824 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 346240000 20013 1653 18723 37956;37957 30426;30427 30427 2 9606 Homo sapiens 0.15540118237390743 NPAVLSAASFDGR Unmodified 1303.6521 0.65206377 762 O94979-9;D6REX3;O94979-6;O94979-3;O94979-4;O94979-10;O94979-2;O94979;O94979-8;A0A1S5UZ19;A1LU61;A0A024RDH6;D6RHZ5;O94979-7;H7BXG7;O94979-5 SEC31A;SEC31L1 Protein transport protein Sec31A yes no 0 0 0 7.5 0.5 2 2 50.856 50.933 2;3 1.7295E-27 13997 20230619_1887_Aki_TMTPro18x_K_F7 250.26 211.91 207340 183460 193170 199030 222880 258410 236200 241500 276520 255710 264290 245630 265810 224980 260270 307420 274440 278740 191710 168060 197920 200580 229690 256430 238620 248170 278920 257420 271700 249320 270990 237090 265810 305850 262470 265030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 449670000 20014 762 18724 37958;37959;37960;37961 30428;30429;30430 30428 3 9606 Homo sapiens 0.012383815867906378 NPDDITNEEYGEFYK Unmodified 1832.7741 0.77408897 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 3.43 1.4 1 1 1 2 2 56.444 56.466 2;3 2.6031E-42 17131 20230619_1881_Aki_TMTPro18x_K_F2 231.13 222.81 682980 566210 697920 720150 638070 802400 720670 683480 775750 861730 899630 852130 953680 850240 836760 1087300 866980 976950 631700 519620 707060 715620 670430 802190 723840 711390 792560 861150 919210 866050 966240 889330 856070 1082000 829990 928680 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 11735000000 20015 3177 18725 37962;37963;37964;37965;37966;37967;37968 30431;30432;30433;30434;30435;30436 30432 6 9606 Homo sapiens -0.10898710702804237 NPDDITQEEYGEFYK Unmodified 1846.7897 0.78973904 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 0 3.62 2.12 2 1 1 1 1 1 1 56.91 56.94 2;3 4.8451E-14 17134 20230619_1882_Aki_TMTPro18x_K_F3 178.03 170.1 561880 456840 519940 536560 468450 571830 526610 518740 572620 721990 661240 630360 752510 616530 605430 784310 686050 683630 519210 418940 531010 535870 492770 574350 529300 539030 585180 715840 677940 643750 757960 645360 623670 779340 655620 650390 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 10904000000 20016 751 18726 37969;37970;37971;37972;37973;37974;37975;37976 30437;30438;30439;30440;30441;30442 30439 6 9606 Homo sapiens -0.09978424185783297 NPDEFYYK Unmodified 1074.4658 0.46582612 4718 Q9Y3A2;Q9Y3A2-2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 yes no 0 0 0 4.5 0.5 2 2 50.295 50.348 2;3 0.0036699 14160 20230619_1883_Aki_TMTPro18x_K_F4 128.38 94.305 146970 118620 134360 162690 142640 167740 150920 156710 168290 177020 181350 196360 205560 168670 172830 213910 204350 216370 135790 108950 137840 160670 147860 168930 152280 161430 171080 178380 186590 197530 207450 177320 178290 214240 195300 205440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 129770000 20017 4718 18727 37977;37978;37979;37980 30443;30444;30445 30443 3 9606 Homo sapiens -0.06842815581717332 NPDGGFATYETK Unmodified 1298.5779 0.57789577 1440 B2R694;A0A384MTQ5;P48449-3;P48449;A0A0G2JQD0;P48449-2 LSS Terpene cyclase/mutase family member;Lanosterol synthase yes no 0 0 0 4 0 1 47.552 47.592 2 7.0506E-05 12914 20230619_1883_Aki_TMTPro18x_K_F4 142.07 103.71 18344 18520 17746 17839 15577 17002 15531 17904 21079 22181 25017 24710 25971 24487 22838 30173 29960 29451 16982 16942 18040 18078 16361 17292 15852 18340 21321 22266 25518 24979 26350 25554 23712 30167 28593 27982 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64567000 20018 1440 18728 37981 30446 30446 1 9606 Homo sapiens -0.05945006295405619 NPDGTMNLMNWECAIPGK 2 Oxidation (M) 2078.886 0.88598116 2061 H3BQQ9;A8K503;Q7KZS0;B0QYN7;P63279;H3BPC4 UBE2I SUMO-conjugating enzyme UBC9 yes no 0 2 0 6.5 0.5 1 1 58.812 58.87 3 3.9892E-05 17313 20230619_1887_Aki_TMTPro18x_K_F7 92.264 87.262 39495 33835 37532 39493 44262 38807 42027 42370 42156 43004 49775 44200 46998 40391 42550 50620 42754 54891 36515 31020 38388 39425 45299 39411 42525 43059 43248 43454 50551 44729 47837 42339 43409 50915 40989 52046 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184700000 20019 2061 18729 37982;37983 30447;30448 30448 1292;1293 2 9606 Homo sapiens -0.11030639213322502 NPDIFTEVANCCIR Unmodified 1707.7709 0.77087505 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 6.5 0.5 1 1 58.925 58.982 3 8.3408E-12 17734 20230619_1886_Aki_TMTPro18x_K_F6 144.8 126.66 21674 17526 23766 22929 20139 23918 24118 22124 25576 25124 23261 26115 26914 25433 24317 29198 34720 32334 20056 16090 23911 22726 21317 24064 24136 22816 25891 25266 24158 26438 27262 26451 25372 29441 33103 30687 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127790000 20020 594 18730 37984;37985 30449 30449 1 9606 Homo sapiens -0.05469955562125506 NPDTIEQCRR Unmodified 1287.599 0.59898234 1917 A6PVJ3;H0Y621;A2TJK5;Q5JWS0;H0Y5K5;Q9Y282;Q9Y282-3;O95330;Q9Y282-2;B4DV36 ERGIC3 Endoplasmic reticulum-Golgi intermediate compartment protein 3 yes no 0 0 1 3.5 0.5 1 1 30.467 30.547 3 0.00058326 5757 20230619_1883_Aki_TMTPro18x_K_F4 101.93 64.817 20467 17461 17740 16841 28969 28106 27390 26475 35642 23891 30590 27870 31608 22180 27642 27385 39396 29716 18910 15983 18412 17221 29147 27545 27943 27078 35599 24427 31644 27940 32022 23365 28819 27568 37513 28236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45572000 20021 1917 18731 37986;37987 30450 30450 1 9606 Homo sapiens -0.033313194675201885 NPDTQWITK Unmodified 1101.5455 0.54547343 210 A0A024R2Q4;P61313;A0A2R8YEM3;E7EQV9;E7ENU7 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 0 0 0 7 0 1 50.307 50.388 3 0.0047109 13766 20230619_1887_Aki_TMTPro18x_K_F7 73.067 59.404 143180 126120 132280 125000 124500 157700 143400 143340 224740 147910 129400 169020 217500 174810 119590 228600 238230 226000 132370 115460 135150 126860 130790 156670 145930 147540 220420 150110 141240 170860 214660 183010 130460 228350 226700 214730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170800000 20022 210 18732 37988 30451 30451 1 9606 Homo sapiens -0.0012374890773116931 NPDTQWITKPVHK Unmodified 1562.8205 0.82052608 210 A0A024R2Q4;P61313;A0A2R8YEM3;E7EQV9;E7ENU7 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 0 0 1 2 0 1 46.165 46.245 4 1.0808E-05 12672 20230619_1881_Aki_TMTPro18x_K_F2 109.84 97.862 444160 355700 456130 424540 486950 539440 496830 457860 502980 437360 478910 452790 501550 391350 514160 371590 470140 405110 410740 326270 462630 424680 503510 534920 500600 472920 510980 443750 493480 456800 511430 404890 519340 376160 449800 384660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 799860000 20023 210 18733 37989 30452;30453 30452 2 9606 Homo sapiens 0.06162863500412641 NPDVDTSFLPDRDREEEENR Unmodified 2432.084 0.084023579 3887 Q14320;B0S8I6;A0A024QZY3;Q9Y247 FAM50A;FAM50B Protein FAM50A;Protein FAM50B yes no 0 0 2 1.5 0.5 1 1 43.283 43.324 4 2.5215E-29 11552 20230619_1880_Aki_TMTPro18x_K_F1 195.36 180.07 32578 24077 31991 30804 27230 35434 31951 34161 44993 43933 42424 40162 53415 44198 40632 49140 47843 48356 30102 22107 32473 30623 28855 35436 32357 35233 45011 43781 44098 41093 53556 45732 41985 49236 45710 45935 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173800000 20024 3887 18734 37990;37991 30454 30454 1 9606 Homo sapiens -0.07473507224631248 NPEFFEHR Unmodified 1074.4883 0.4882929 3250 O43252;Q05BW9;Q4W5F0 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 3.5 0.5 1 1 39.698 39.747 3 0.00024411 9421 20230619_1883_Aki_TMTPro18x_K_F4 154.35 121.09 134560 91106 121440 117650 143730 173500 151080 147450 172380 170960 183760 163100 191070 148410 159130 199190 184990 172260 124190 83693 124800 117360 147900 170550 152560 153000 174880 171310 188150 165570 193170 156290 164030 197730 176660 163950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 280390000 20025 3250 18735 37992;37993 30455;30456 30456 2 9606 Homo sapiens -0.04597171393447752 NPEFFEHRK Unmodified 1202.5833 0.58325592 3250 O43252;Q05BW9;Q4W5F0 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 1 7 0 1 38.269 38.332 4 0.0038644 8571 20230619_1887_Aki_TMTPro18x_K_F7 85.29 67.482 54584 41446 40922 47681 56523 52775 47980 50535 63715 63000 61882 59974 77573 62842 50355 102890 94440 74721 50345 38011 42963 47711 57237 52967 49361 52101 63993 62931 64212 61224 77419 66818 54400 101010 89796 71341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68341000 20026 3250 18736 37994 30457 30457 1 9606 Homo sapiens -0.009932379222618692 NPEGDGLLEYSTFNFWR Unmodified 2043.9327 0.9326553 3830 Q6FGF7;Q13015 AF1Q;MLLT11 Protein AF1q yes no 0 0 0 7 0 1 64.522 64.551 3 3.5691E-19 19891 20230619_1887_Aki_TMTPro18x_K_F7 191.44 174.91 38209 32941 35541 41794 37248 49479 47579 39436 44299 39450 46546 38216 48038 46870 42381 55296 38478 35875 35322 30225 36408 41561 38884 49195 47251 41011 45377 39869 47663 39220 48742 48448 43054 54320 36835 34290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130930000 20027 3830 18737 37995 30458 30458 1 9606 Homo sapiens -0.047553720038877145 NPEHFVVCNR Unmodified 1270.5877 0.58768937 1896 A0MNN4;Q2TAY7;Q2TAY7-2 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes no 0 0 0 6.5 0.5 1 1 37.093 37.159 3 7.3385E-10 8078 20230619_1887_Aki_TMTPro18x_K_F7 169.93 144.46 62144 43618 55909 58411 68065 72624 64952 70678 74677 72982 78673 72257 72106 61322 74083 70452 79271 71997 57364 40078 57506 57954 69660 72307 65992 72365 75691 73606 80209 73032 73894 64105 75560 70758 75745 68393 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 269330000 20028 1896 18738 37996;37997 30459;30460 30460 2 9606 Homo sapiens -0.03678096771000128 NPEILAIAPVLLDALTDPSR Unmodified 2117.1732 0.17321992 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 8 0 1 68.235 68.254 3 0.0094172 21235 20230619_1888_Aki_TMTPro18x_K_F8 57.826 42.95 3020.8 2861.2 2513.1 2050.5 2672.5 1771.2 2173.2 2255.1 3074.9 2648.8 2916.8 1913.3 3685.9 1862.5 2989.1 2482.8 3687 2504.7 2792.1 2612.7 2592.4 2139.5 2743.8 1830.6 2249.4 2280.3 3075.3 2634.2 3026.1 1977.7 3696.2 1962.7 3086.6 2487.7 3512.7 2383.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1687000 20029 2863 18739 37998 30461 30461 1 9606 Homo sapiens 0.1593202426352036 NPELPNAAQAQK Unmodified 1279.6521 0.65206377 2629 B7ZAX9;B4DZC0;O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 6 0 1 43.26 43.353 2 3.0027E-07 10933 20230619_1886_Aki_TMTPro18x_K_F6 134.57 91.319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20030 2629 18740 37999 30462 30462 1 9606 Homo sapiens 0.023423815867772646 NPELPNAAQAQKEEQLK Unmodified 1906.9749 0.97485447 2629 B7ZAX9;B4DZC0;O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 1 5.67 0.471 1 2 47.073 47.152 3;4 2.4539999999999996E-19 12641 20230619_1886_Aki_TMTPro18x_K_F6 192.85 145.76 212040 176170 193130 198160 226010 254000 223030 222930 245830 243910 263630 192120 234100 174790 241590 173060 191960 145150 195940 161480 198290 199090 232170 251920 225790 230380 249870 243830 267900 196900 239930 180900 242390 172670 183820 138330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204090000 20031 2629 18741 38000;38001;38002 30463;30464 30463 2 9606 Homo sapiens 0.057646034045092165 NPELQNLLLDDFFK Unmodified 1704.8723 0.87228688 3630 P52209-2;P52209;B4E2U0;B4DV68;A9Z1X1 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 7 0.816 1 1 1 65.633 65.662 3 0.00093186 20388 20230619_1887_Aki_TMTPro18x_K_F7 82.102 59.299 21756 20063 22756 28287 23497 25312 28050 24630 28419 32092 30113 26312 28336 28254 25016 32183 29542 32254 20140 18426 23080 27837 24454 25805 28024 25425 29018 31859 30711 27050 28850 29278 25788 32262 28241 30624 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 358390000 20032 3630 18742 38003;38004;38005 30465 30465 1 9606 Homo sapiens 0.048045624036831214 NPENWAYYK Unmodified 1183.5298 0.52982336 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;Q9BXJ9-4;A0A8V8TQT7 NAA15;NARG1 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 7 0 1 52.547 52.618 3 0.0029786 14745 20230619_1887_Aki_TMTPro18x_K_F7 84.17 57.572 100130 89793 92489 89597 93845 110460 100500 96385 118590 118130 117960 106560 118400 101010 104140 117970 111230 111350 92581 82197 94598 90834 97645 109830 101520 100010 119790 117900 120980 108550 120140 105280 106620 117880 106360 105830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69399000 20033 2297 18743 38006 30466 30466 1 9606 Homo sapiens -0.054600354247895666 NPEPELLVR Unmodified 1065.5819 0.58185894 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 4 0.816 1 1 1 47.273 47.339 2 0.00044319 12935 20230619_1882_Aki_TMTPro18x_K_F3 146.03 102.91 1249500 1091500 1098500 1403100 1276600 1388500 1401100 1386100 1552200 1633000 1626100 1757300 1688400 1494700 1436500 1873800 1806000 2094000 1154700 1001600 1133100 1390700 1315500 1405200 1410100 1423100 1576500 1640600 1668300 1769200 1710000 1570600 1488100 1887700 1726400 1985500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2031699999.9999998 20034 3900;2497 18744 38007;38008;38009 30467;30468 30467 2 9606 Homo sapiens 0.051691279890064834 NPEPNIK Unmodified 810.42357 0.42356738 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 4.5 0.5 2 2 39.517 39.583 2;3 0.0069163 9350 20230619_1885_Aki_TMTPro18x_K_F5 94.887 61.625 137440 79092 155570 161260 202160 206340 145780 181240 204010 128630 204460 234900 177980 175950 215010 93397 208110 201700 126990 73155 157200 156530 204730 204530 152200 185440 204230 136170 208860 231400 184380 179040 216900 101680 199140 190450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 349010000 20035 630 18745 38010;38011;38012;38013 30469;30470 30470 2 9606 Homo sapiens 0.010772538005653587 NPEQEPIPIVLR Unmodified 1403.7773 0.77726428 3810 Q07960;H0YE29;B4DPZ4;O15376 ARHGAP1 Rho GTPase-activating protein 1 yes no 0 0 0 4.67 0.471 1 2 54.934 54.973 2;3 9.031E-06 16204 20230619_1883_Aki_TMTPro18x_K_F4 136.38 108.95 50544 39620 40484 46992 49106 56022 50597 53528 63326 53247 48120 54397 52902 46046 52653 58237 58214 55699 46648 36342 42134 46968 50424 55905 51312 54834 63184 53881 50348 54873 53852 48409 53882 58171 55628 52939 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55212000 20036 3810 18746 38014;38015;38016 30471;30472 30471 2 9606 Homo sapiens 0.0915267372317885 NPEQVDLYQFMAK Oxidation (M) 1597.7446 0.74464352 2037 A8K492;P56192;B4DF61 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 1 0 6 0 1 56.23 56.304 3 0.02281 16580 20230619_1886_Aki_TMTPro18x_K_F6 51.092 34.953 108860 91127 94683 109840 111320 118830 121990 133570 134590 149770 152460 164560 179440 149060 148860 178260 160240 184630 100560 83580 97708 109520 114600 119830 122800 135820 137220 150880 156830 165850 180790 155830 152700 178940 153370 175200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 441350000 20037 2037 18747 38017 30473 30473 1279 1 9606 Homo sapiens -0.030319014620090456 NPEVGLK Unmodified 755.41775 0.41775372 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 6 0 1 42.94 43.034 2 0.083623 10813 20230619_1886_Aki_TMTPro18x_K_F6 71.379 32.588 138420 83369 123890 148170 141720 200060 145100 172260 220380 188670 207020 277060 244170 222720 151380 132130 331620 312040 127670 76930 127530 144820 146420 197480 148460 178270 219660 192560 214970 274890 243910 226910 165360 144370 315410 294540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139880000 20038 3402 18748 38018 30474 30474 1 9606 Homo sapiens 0.030261552888987353 NPEVPVNFAEFSK Unmodified 1476.7249 0.72489436 3240 O15347;E9PES6;E7ES08;E7EQU1;Q7Z684 HMGB3;DKFZp779G118 High mobility group protein B3 yes no 0 0 0 7 0.816 1 1 1 60.629 60.673 3 5.4835E-08 18068 20230619_1887_Aki_TMTPro18x_K_F7 156.31 132.93 328150 242060 237850 281670 223840 312610 306080 290700 372310 357250 352420 391630 425630 402230 280600 474350 444420 492940 302560 222050 249290 281600 236660 313130 305800 300330 374770 358680 365800 396420 425650 418220 298010 475960 423970 467820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 641760000 20039 3240 18749 38019;38020;38021 30475;30476 30476 2 9606 Homo sapiens 0.005600905895562391 NPEYVWVHEK Unmodified 1299.6248 0.62478638 1766 B4DKX3;A0A8I5KSH6;Q13206;A0A8I5KQZ1;A0A3B3ISR7;Q86VR6;E9PIF2;Q59EC7;A0A8I5KXY1;A0A8I5KPM1;A0A8I5KUU7 DDX10 Probable ATP-dependent RNA helicase DDX10 yes no 0 0 0 5.5 0.5 1 1 47.252 47.33 3 0.01175 12758 20230619_1886_Aki_TMTPro18x_K_F6 67.456 51.516 99762 78585 89795 97539 92325 104990 105870 106860 141680 122890 124950 117720 130280 116290 120900 132100 123770 133260 92150 72115 92139 97052 96169 105640 107050 109460 141600 123240 129170 119730 132390 120830 123330 132540 118460 126520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109950000 20040 1766 18750 38022;38023 30477;30478 30478 2 9606 Homo sapiens -0.013041019535648957 NPFDTFFGQR Unmodified 1227.5673 0.5672715 3503 Q6FI51;Q6FHS4;P25685;A0A7I2V3K7;P25685-2;M0QXK0;M0R080;M0R1D6;M0QZD0;M0QYT3;M0R128;A0A1B0GX60 DNAJB1 DnaJ homolog subfamily B member 1 yes no 0 0 0 2.5 0.5 1 1 62.436 62.467 3 0.010506 19683 20230619_1881_Aki_TMTPro18x_K_F2 65.5 45.337 35788 25783 30164 36025 33869 33833 30610 34959 33194 39119 37625 39347 43178 33757 33897 45450 37737 42191 33025 23699 31190 35498 34788 34408 31159 35743 33895 39299 38642 39749 43428 35633 34910 45268 36100 40091 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10924000 20041 3503 18751 38024;38025 30479;30480 30479 2 9606 Homo sapiens -0.03740944159153514 NPFGNAGLLLGEAGK Unmodified 1456.7674 0.76742787 2373 B3KPA6;B4DEA8;P49748-2;P49748;P49748-3;Q53HR2;G3V1M7 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 2 0 1 62.544 62.553 3 0.077217 19754 20230619_1881_Aki_TMTPro18x_K_F2 47.639 19.672 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20042 2373 18752 38026 30481 30481 1 9606 Homo sapiens 0.05731485717774376 NPFLSLAACVMPSR Unmodified 1561.7745 0.77450386 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 7 0 1 64.177 64.207 3 0.054553 19736 20230619_1887_Aki_TMTPro18x_K_F7 52.112 41.007 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20043 2863 18753 38027 30482 30482 1 9606 Homo sapiens 0.016087590023289522 NPFSEQGTEEVKK Unmodified 1491.7205 0.72053726 2857 Q3V6T2;D6W5D1;Q3V6T2-2;A0A2U3TZV9;Q3V6T2-3;Q3V6T2-4;Q3V6T2-5;A0A2R8YG73;A0A2R8Y4X4;A0A2R8Y4W8;O14997;Q9UI01;Q6DCA5;A0A2R8YG52;A0A2R8YD99;A0A2R8Y846;Q6PAV0;A0A2R8Y6B2;Q86YH1;A0A2R8Y7D9;A0A2R8YD81;A0A2R8Y7L3 CCDC88A;KIAA1212 Girdin yes no 0 0 1 5 0 1 45.715 45.792 3 6.9853E-05 11968 20230619_1885_Aki_TMTPro18x_K_F5 109.83 92.346 33415 22763 25289 32434 32499 38969 35465 34979 44247 44030 49497 44200 52816 45166 39861 58155 54506 54697 30804 20932 26524 32023 33324 38800 35848 36248 44788 44034 50627 44946 53197 47241 41671 57981 52011 51988 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43945000 20044 2857 18754 38028 30483 30483 1 9606 Homo sapiens -0.005654186240235504 NPFVHELR Unmodified 1010.5298 0.52976379 4253 Q8NF37 LPCAT1 Lysophosphatidylcholine acyltransferase 1 yes yes 0 0 0 7 0.816 1 1 1 41.269 41.324 3 0.00056705 9780 20230619_1887_Aki_TMTPro18x_K_F7 133.58 95.496 58260 41754 55175 50646 54950 53663 52994 63273 69137 61354 64669 70184 68124 52539 67269 60725 74474 75766 53806 38322 56257 50492 57023 54276 54089 63890 69333 62363 66755 70221 69349 55256 68777 61753 71196 71799 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79690000 20045 4253 18755 38029;38030;38031 30484;30485 30484 2 9606 Homo sapiens 0.02492009365892045 NPGFEIIHGLLDR Unmodified 1479.7834 0.78341229 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 1 0 1 61.977 61.977 3 0.00069217 19283 20230619_1880_Aki_TMTPro18x_K_F1 75.018 51.792 29064 28542 31943 27671 34491 25816 39753 35463 30783 32232 33242 28832 36935 26236 38388 33135 33083 31111 26930 26114 32213 28037 35626 26519 39498 35483 31982 32623 34143 29361 37602 27540 38687 33093 31691 29578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 488110000 20046 4414 18756 38032 30486 30486 1 9606 Homo sapiens 0.06271191954692767 NPGNQAAYEHFETMK Oxidation (M) 1751.7573 0.75733347 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9;B4DKC9 VCL;HEL114 Vinculin yes no 0 1 0 5 0 1 42.276 42.359 3 1.5938E-05 10508 20230619_1885_Aki_TMTPro18x_K_F5 104.55 98.645 42335 36806 35015 43968 58936 57449 51797 53903 65151 54633 54905 58459 66887 49895 49090 64163 60320 55689 39105 33750 36587 43980 59110 57009 53026 55312 65213 55312 57343 58889 67004 52520 50931 63734 57573 53001 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35902000 20047 51 18757 38033 30487 30487 26 1 9606 Homo sapiens -0.08847490069774722 NPGPSGPQLR Unmodified 1021.5305 0.53049207 2189 B1AJQ6;Q6LEU0;Q86Y82 STX12 Syntaxin-12 yes no 0 0 0 7.5 0.5 1 1 35.001 35.035 2 0.00032404 7506 20230619_1888_Aki_TMTPro18x_K_F8 131.5 94.803 53117 38969 40583 46470 51842 53732 45208 48097 65983 52584 56529 57791 60817 54002 47640 66435 73608 59927 48988 35757 42461 46405 52828 53669 46607 49639 65642 53103 58616 58326 61360 56461 50206 66145 70082 57038 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38783000 20048 2189 18758 38034;38035 30488;30489 30489 2 9606 Homo sapiens 0.02058804014961879 NPGVGNGDDEAAELMQQVNVLK Unmodified 2297.0958 0.095774239 2536 Q15691;B4DM33 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes no 0 0 0 4 0 1 62.874 62.88 3 3.6489E-12 19572 20230619_1883_Aki_TMTPro18x_K_F4 128.38 118.19 8159.5 8168.4 9228.4 10929 7196 9365.9 8298.2 8601 10736 11716 12699 12615 14398 10610 11414 13802 12152 14688 7563.5 7495.5 9265.9 10785 7677.3 9568.6 8385.7 8928 10882 11700 13007 12700 14486 11189 11714 13860 11638 13932 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21589000 20049 2536 18759 38036 30490 30490 1 9606 Homo sapiens -0.0008898173496163508 NPGVSPLAR Unmodified 909.50321 0.50321468 4736 Q9Y4C2-2;Q9Y4C2 TCAF1 TRPM8 channel-associated factor 1 yes no 0 0 0 4.5 3.5 1 1 38.405 38.398 2 0.0052793 8827 20230619_1888_Aki_TMTPro18x_K_F8 93.701 93.701 113910 78747 103010 97253 113800 126060 115430 119880 144640 127110 140150 124730 139170 118020 114920 131080 152060 126000 105140 72299 105670 97100 117470 125130 117210 123030 145470 128050 143820 126570 140950 122660 119410 131200 144950 119830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104040000 20050 4736 18760 38037;38038 30491;30492 30492 2 9606 Homo sapiens 0.044843204745689036 NPGVWLNTTQPLCK Unmodified 1626.8188 0.81881152 2349 B3KMA8;K7EIE8;O95983-2;O95983;A0A0A0MTS6 MBD3 Methyl-CpG-binding domain protein 3 yes no 0 0 0 3.5 0.5 1 1 58.35 58.366 3 1.6221E-05 17622 20230619_1883_Aki_TMTPro18x_K_F4 114.7 79.587 66594 48337 54159 60265 55600 65189 60186 69370 76416 77227 65858 63905 83915 63067 59202 81303 68881 74586 61439 44374 56110 59951 57851 65630 60942 70745 76571 77219 68815 65467 83848 66093 61293 80966 65850 70892 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202220000 20051 2349 18761 38039;38040 30493 30493 1 9606 Homo sapiens 0.030474864202005847 NPGYPQSEGLLGECMIR Unmodified 1919.887 0.88696744 4100 Q99961;Q9UQD4;Q6FGM0;M0R0I3;M0QYE0 SH3GL1 Endophilin-A2 yes no 0 0 0 5.5 0.5 1 1 56.306 56.374 3 5.939E-14 16615 20230619_1886_Aki_TMTPro18x_K_F6 127.61 118.19 28189 25889 30745 32869 32958 33875 30764 34571 38755 40455 36584 46109 45483 38570 36825 47081 45041 44319 26105 23749 31059 32635 33985 34202 31411 35420 38983 40734 38085 46265 45735 40475 38108 46994 43011 42126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105290000 20052 4100 18762 38041;38042 30494 30494 1 9606 Homo sapiens -0.036180567821020304 NPHEVQPAYATR Unmodified 1381.6739 0.67386184 4488 Q9GZT9;Q9GZT9-2;R4SCQ0;R4SCP5;Q9NTU9;A0A590UJK7;A0A590UJT7;A0A590UJ78;A6XP74;Q9GZT9-3;R4SCF3;R4SCC4;R4RYY7;R4RYZ7;R4RZ18;R4S1C5;I6QYW0 EGLN1 Egl nine homolog 1 yes no 0 0 0 4.5 0.5 1 1 31.637 31.707 3 1.3164E-05 6290 20230619_1885_Aki_TMTPro18x_K_F5 131.79 100.15 15484 8120.8 14820 9785.6 14113 14712 13124 13816 20841 15991 17708 18048 20064 17818 14705 18457 20643 16108 14280 7464.6 15065 9823.2 14700 14485 13534 14225 20657 16123 18411 18222 20160 18412 15393 18399 19662 15341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30806000 20053 4488 18763 38043;38044 30495 30495 1 9606 Homo sapiens -0.0017081366463571612 NPHNDRFVLSK Unmodified 1325.684 0.6840326 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;E9PFF2;A0A0S2Z5C0;F8W888 HEL107;TKT Transketolase yes no 0 0 1 2 0 1 38.273 38.337 4 0.00042118 9057 20230619_1881_Aki_TMTPro18x_K_F2 113.52 69.626 128760 121070 122960 114150 131010 103130 143810 153740 58924 133100 160230 137780 143040 117740 144380 161390 185650 154930 119130 110760 125420 115900 135240 106470 141810 152960 69113 135470 158800 139170 146570 124430 149150 161070 177010 147330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107470000 20054 3523 18764 38045 30496 30496 1 9606 Homo sapiens 0.03421794060614047 NPIEASVLLAEASLAR Unmodified 1652.9097 0.90973501 2342 B3KM61;Q504Q3-2;Q504Q3-3;Q504Q3 PAN2 PAB-dependent poly(A)-specific ribonuclease subunit PAN2 yes no 0 0 0 8 0 1 65.392 65.412 3 1.1068E-05 20109 20230619_1888_Aki_TMTPro18x_K_F8 101.05 84.801 16035 12287 11867 14372 14567 10225 16320 17807 13427 16679 21548 15408 16498 14143 15370 16719 19121 17138 14790 11270 12452 14298 14917 10847 16273 17633 14166 16858 21463 15683 16944 14770 15863 16780 18245 16280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8000400 20055 2342 18765 38046 30497 30497 1 9606 Homo sapiens 0.1093965366935663 NPIHAIGLLIR Unmodified 1215.7452 0.74517629 1809 A0A8V8NBT1;Q12769;G3V198;E9PR16;Q12769-3 NUP160 Nuclear pore complex protein Nup160 yes no 0 0 0 6.5 0.5 1 1 55.834 55.901 3 0.0020362 16162 20230619_1887_Aki_TMTPro18x_K_F7 80.763 36.628 13861 13226 15679 20184 16631 16296 14416 14659 18737 15636 16709 16874 21717 15349 11986 19104 18544 18846 12844 12157 15812 19744 17126 16737 14804 15129 18763 15796 17445 17029 21528 16095 12760 19101 17682 17902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 474170000 20056 1809 18766 38047;38048 30498 30498 1 9606 Homo sapiens 0.1459335083068254 NPITGFGK Unmodified 832.4443 0.44430282 3865 Q13642-4;Q13642-5;Q13642-1;Q53FI7;B7Z4B7;B7Z5V0;B7Z9A1;B7Z5T3;B7Z6U8;B3KRI9;Q5JXI8 FHL1 Four and a half LIM domains protein 1 yes no 0 0 0 2.5 0.5 1 1 50.12 50.184 2 0.0068696 14503 20230619_1881_Aki_TMTPro18x_K_F2 107.57 40.111 1214200 1027300 1173400 1152000 993680 1038100 1147400 1147300 1366100 1477500 1547300 1565100 1527800 1274500 1400400 1622300 1619600 1678600 1122600 941530 1192400 1152400 1050400 1061500 1155500 1173600 1387000 1477700 1578100 1574900 1553800 1342900 1439600 1627100 1547900 1593500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 827300000 20057 3865 18767 38049;38050 30499;30500;30501 30499 3 9606 Homo sapiens 0.021378441802426096 NPLIAGK Unmodified 711.42792 0.42792448 3719 P62316;P62316-2;K7EJB5 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 0 0 0 1.5 0.5 1 1 46.259 46.299 2 0.02054 12847 20230619_1880_Aki_TMTPro18x_K_F1 107.66 55.97 1060400 774170 934580 1005800 1206800 1288900 1045900 1111600 1695800 1180100 1437800 1274700 1447100 1164500 1073500 1277600 1560100 1341400 978880 710980 964210 1000100 1229000 1277800 1083800 1149400 1678700 1193300 1485800 1286800 1459000 1211200 1126000 1285200 1486500 1274200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1005099999.9999999 20058 3719 18768 38051;38052 30502;30503 30502 2 9606 Homo sapiens 0.06066763014143817 NPLPEYLSR Unmodified 1087.5662 0.56620887 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;Q01433-5;Q01433-3;Q01433-4;H0YF16;A0A804H2H4 AMPD2 AMP deaminase 2 yes no 0 0 0 7 0.816 1 1 1 50.193 50.271 2 0.0090449 13708 20230619_1887_Aki_TMTPro18x_K_F7 86.882 39.8 380520 335710 370980 394800 350180 414310 420720 382340 484390 486330 472690 533480 510780 459240 484060 588500 570490 593010 351960 307770 377540 394160 367550 416770 422040 395770 489550 487410 487670 536810 519120 482870 498050 589240 545160 563110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284550000 20059 1570 18769 38053;38054;38055 30504 30504 1 9606 Homo sapiens 0.025928414719373905 NPLPPSVGVVDK Unmodified 1220.6765 0.6764876 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 0 7 0 1 51.933 52.007 2 0.0067314 14480 20230619_1887_Aki_TMTPro18x_K_F7 82.171 47.071 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20060 4246 18770 38056 30505 30505 1 9606 Homo sapiens 0.07497641740337713 NPLPPSVGVVDKK Unmodified 1348.7715 0.77145062 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 1 2 0 1 48.49 48.555 3 0.00080146 13854 20230619_1881_Aki_TMTPro18x_K_F2 89.471 69.009 312840 259830 291070 294150 305070 354130 369750 299590 353660 370930 404800 286870 374580 277690 344410 294110 266660 206590 289140 238170 297790 295080 317560 352340 368440 311870 363250 368560 410810 294970 381330 287750 346170 290670 255470 197370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 527360000 20061 4246 18771 38057 30506 30506 1 9606 Homo sapiens 0.11101575211500858 NPMVETLGTVLQLK Unmodified 1541.8487 0.84871466 1318 Q06124-1;Q06124;A0A8I5KW48;A0A3G1LBG2;A0A1W2PPU4;A0A8I5QJ58;Q06124-3;A0A8I5KRZ3;A0A8I5QL30;A0A8I5KVS6;B3GUD5;H0YF12;B3GUD3 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 0 0 0 3 0 1 64.947 64.979 3 0.079431 20563 20230619_1882_Aki_TMTPro18x_K_F3 38.189 18.082 5514.7 2682.6 5251.3 6924 5459 4910.5 6479.8 4800 6495.5 6927.7 6955.6 6705.6 6193.1 6579.1 6125 6627.3 7153.7 6776.8 5084.3 2494.5 5368.7 6606.8 5671.2 5112.4 6471.3 4978 6636.6 6881.7 7080.7 6811.1 6351.4 6787.9 6289 6667.2 6832 6436.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23142000 20062 1318 18772 38058 30507 30507 1 9606 Homo sapiens 0.09946425365546929 NPNGPYPYTLK Unmodified 1262.6295 0.62953741 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 0 0 2 0 1 49.897 49.956 2 1.1841E-12 14425 20230619_1881_Aki_TMTPro18x_K_F2 215.72 166.29 76120 69233 78539 95248 84703 105940 95252 104720 107170 97550 104030 89676 101670 79390 108930 103130 97282 88632 70454 63569 79799 94150 87871 106220 95820 106840 108340 98736 106710 91128 104120 83506 109970 102470 93131 84369 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114030000 20063 1455;1520 18773 38059 30508 30508 1 9606 Homo sapiens 0.008727821891625354 NPNNPNAHGDFLK Unmodified 1436.6797 0.6796755 1712 Q8IXB1;Q8IXB1-2;A0A7P0TAQ9;A0A7P0Z431;Q8IXB1-3;A0A7P0TB97;A0A7P0Z4F2;A0A494C1G5;Q86XS7;A0A7P0TB22;A0A7P0T9B7;A0A7P0TB83;A0A7P0T8Y3;Q71S60;E7EP04 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 0 7 0 1 40.244 40.309 3 0.00080163 9376 20230619_1887_Aki_TMTPro18x_K_F7 97.463 70.054 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20064 1712 18774 38060 30509 30509 1 9606 Homo sapiens -0.021197151529804614 NPNTSEPQHLLVMK Unmodified 1606.8137 0.81372614 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 7.5 0.5 1 1 46.945 47.013 3 6.2063E-10 12292 20230619_1888_Aki_TMTPro18x_K_F8 169.04 147.48 122080 102420 133780 145350 132080 184950 168010 175760 194910 189130 178930 204260 203230 158680 152640 213770 220810 238270 112990 94104 135050 143730 138580 183640 168150 180490 196450 190870 185510 205060 204230 168210 160200 215090 210730 225990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135190000 20065 3387 18775 38061;38062 30510;30511 30511 2 9606 Homo sapiens 0.034591825575489565 NPPAFTELQLPR Unmodified 1381.7354 0.73539946 2977 F6T1Q0;Q6L8Q7-2;Q6L8Q7 PDE12 2',5'-phosphodiesterase 12 yes no 0 0 0 8 0 1 57.335 57.387 3 1.5212E-05 16725 20230619_1888_Aki_TMTPro18x_K_F8 110.38 89.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20066 2977 18776 38063 30512 30512 1 9606 Homo sapiens 0.059801180346539695 NPPDIVVQPGHIR Unmodified 1440.7837 0.78374664 2072 Q9UEL4;Q5U0H8;A8K5D4;O95297-4;O95297-2;O95297;Q9UEL6;A0A024R8Y3;O95297-3 MPZL1 Myelin protein zero-like protein 1 yes no 0 0 0 7 0 1 42.787 42.862 3 3.6814E-08 10356 20230619_1887_Aki_TMTPro18x_K_F7 129.19 101.86 23185 29443 26828 33124 35117 38517 32698 30343 40569 29081 33679 33475 32943 31357 33092 35238 43971 39500 21541 26953 27114 33211 35754 38361 33338 31546 40574 29627 34849 33726 33694 32610 34257 35582 41935 37488 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134890000 20067 2072 18777 38064 30513 30513 1 9606 Homo sapiens 0.08098611674540734 NPPGFAFVEFEDPR Unmodified 1620.7573 0.75725712 981;2236 B2R6F3;P84103-2;P84103;A0A087X2D0;A0A0B4J1Z1;B4DEK2;C9JAB2;Q16629-3;Q16629-2;Q16629-4;Q16629 SFRS3;SRSF3;SRSF7 Serine/arginine-rich splicing factor 3;Serine/arginine-rich splicing factor 7 no no 0 0 0 5 0.816 1 1 1 62.218 62.244 3 1.3234E-11 19263 20230619_1883_Aki_TMTPro18x_K_F4 171.51 154.1 161960 113210 131960 166640 112350 198970 171360 164600 177000 209540 187000 210940 209360 206360 185180 206010 182810 219840 149400 104130 136580 164180 120480 197690 169520 171740 180570 209400 192550 213760 211980 212900 188720 207770 175190 208520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1140000000 20068 2236;981 18778 38065;38066;38067 30514;30515;30516 30514 3 9606 Homo sapiens -0.028291220074379453 NPPGFAFVEFEDPRDAADAVR Unmodified 2319.092 0.09200949 2236 B2R6F3;P84103-2;P84103;A0A087X2D0 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 yes no 0 0 1 5 0.816 1 1 1 61.555 61.591 3 1.2544000000000001E-30 18978 20230619_1883_Aki_TMTPro18x_K_F4 215.88 199.22 1595100 1440600 1419000 1562600 1400600 1604500 1674600 1598700 1606400 1683500 1700100 1531400 1708200 1519700 1603900 2065500 1601100 1691000 1474500 1319700 1456900 1569200 1464000 1619600 1670700 1636200 1644600 1692100 1739400 1562800 1738600 1596100 1635300 2044600 1532600 1609800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3657099999.9999995 20069 2236 18779 38068;38069;38070 30517;30518;30519 30517 3 9606 Homo sapiens -0.014772834465020424 NPPGFAFVEFEDPRDAEDAVR Unmodified 2377.0975 0.097488798 981 A0A0B4J1Z1;B4DEK2;C9JAB2;Q16629-3;Q16629-2;Q16629-4;Q16629 SRSF7 Serine/arginine-rich splicing factor 7 yes no 0 0 1 3.5 1.12 1 1 1 1 61.478 61.5 3 7.629100000000001E-30 19001 20230619_1882_Aki_TMTPro18x_K_F3 201.96 181.34 795070 725060 728880 820680 696320 792150 832750 844430 928240 928070 920020 895990 973870 810020 946560 1046400 923320 993190 735200 664410 746050 820800 729880 804570 834830 861340 940110 932390 946680 908460 990740 850960 962320 1044500 884140 943650 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 2659300000 20070 981 18780 38071;38072;38073;38074 30520;30521;30522;30523;30524 30521 5 9606 Homo sapiens -0.035976046547148144 NPPGYLEDSFVK Unmodified 1364.6612 0.66123147 946 U3KQE8;A0A0A0MRX8;A0A1B0GU97;Q5VW28;A0A1B0GW37;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;A0A2R8Y7V8;O00712-4;O00712-5;A0A1B0GWJ4;A0A1B0GVN4;A0A1B0GTC1;A0A1B0GWB8 NFIB Nuclear factor 1;Nuclear factor 1 B-type yes no 0 0 0 5.5 0.5 1 1 55.903 55.972 3 1.8662E-05 16431 20230619_1886_Aki_TMTPro18x_K_F6 98.406 86.046 64464 56425 69544 62775 66551 70856 79125 66573 83240 80938 87600 84592 92332 71769 76725 100990 104340 118890 59673 51705 70141 63020 69653 70969 79166 68725 84736 81150 89849 85326 93326 76068 79957 101920 99663 112680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160430000 20071 946 18781 38075;38076 30525 30525 1 9606 Homo sapiens -0.006512698475489742 NPPNQSSNERPPSLLVIETK Unmodified 2219.1546 0.15460975 3231 O15042-2;O15042;E7ET15;E7EW00;H0Y8D9;B4DK81 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 0 0 1 8 0 1 50.637 50.713 4 9.4126E-11 13799 20230619_1888_Aki_TMTPro18x_K_F8 121.82 98.255 149860 149400 183460 192930 179750 185290 197350 176620 200610 195630 180800 206490 202770 175880 194550 223400 204420 219020 139020 137040 183560 191150 187230 187790 198070 181660 203490 197030 187620 208030 205910 184920 198680 223400 195600 208020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 371050000 20072 3231 18782 38077 30526;30527 30526 2 9606 Homo sapiens 0.09379862621699431 NPPPNADPNMK Oxidation (M) 1209.5448 0.5448215 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31 FUBP1 Far upstream element-binding protein 1 no no 0 1 0 4 0 1 35.433 35.481 3 0.0082924 7734 20230619_1883_Aki_TMTPro18x_K_F4 67.214 49.778 57227 44434 86579 83081 111400 125510 102410 93202 112460 59209 81667 73032 72259 68949 94471 49754 93051 82099 53124 40986 85876 81195 113440 122870 104050 96558 112580 62220 84828 73403 75166 70256 95336 52270 88968 77676 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191910000 20073 2644;4322 18783 38078 30528 30528 1599 1 9606 Homo sapiens -0.0515691161911036 NPPPNADPNMK Unmodified 1193.5499 0.54990688 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 4.5 0.5 1 1 39.135 39.202 3 0.0026323 9227 20230619_1883_Aki_TMTPro18x_K_F4 74.962 49.023 105620 74645 107940 118460 150750 147940 126970 143390 171730 113920 140620 142640 138900 128430 140160 105410 143530 147640 97602 68722 110140 116350 152490 147230 130790 145960 170990 117700 145680 142990 141950 131730 142490 108800 137330 139770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 92993000 20074 2644;4322 18783 38079;38080 30529;30530;30531 30530 3 9606 Homo sapiens -0.03912607756478792 NPPPNSDPNLR Unmodified 1219.5945 0.59454889 507 A0A024R8A7;Q96I24 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 0 0 0 3.5 0.5 1 1 33.856 33.916 2 0.0018998 7105 20230619_1882_Aki_TMTPro18x_K_F3 95.358 76.38 14676 9829.6 14010 16091 18095 19184 18517 19575 25544 19256 21838 25214 25597 18087 19350 13104 22277 23695 13550 9055.5 14362 15766 18490 19165 18857 19959 25459 19666 22759 25050 25683 18660 19911 13863 21296 22388 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32881000 20075 507 18784 38081;38082 30532;30533 30532 2 9606 Homo sapiens -0.0064646061878192995 NPPPNSDPNLRR Unmodified 1375.6957 0.69565991 507 A0A024R8A7;Q96I24 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 0 0 1 6 0.816 1 1 1 29.635 29.707 3 0.0001825 5644 20230619_1886_Aki_TMTPro18x_K_F6 101.39 68.305 22199 11541 19348 16864 27681 24584 24945 19744 26255 17400 22263 18514 19803 17163 16305 15611 21436 19223 20458 10631 19995 16692 27977 24172 25333 20452 26483 17769 22892 18710 20130 17672 16920 15920 20445 18228 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 62623000 20076 507 18785 38083;38084;38085 30534;30535 30535 2 9606 Homo sapiens 0.02283991083913861 NPQAYLNYK Unmodified 1109.5506 0.55055881 3821 Q6AWA4;Q12789;Q6AHZ7;Q12789-3;H3BRD0 DKFZp686O0870;GTF3C1;DKFZp686A111 General transcription factor 3C polypeptide 1 yes no 0 0 0 2 0 1 50.393 50.445 3 0.01054 14646 20230619_1881_Aki_TMTPro18x_K_F2 76.679 57.436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20077 3821 18786 38086 30536 30536 1 9606 Homo sapiens 0.00016554954891034868 NPQDEQERIEER Unmodified 1541.707 0.70701246 1573 A0A5F9ZHM6;A0A5F9ZI15;A0A5F9ZHN0;A0A5F9ZH03;A0A5F9ZHE2;A0A5F9ZHR2;A0A5F9ZHL9;A0A5F9ZHJ4;A0A5F9ZI08;A0A5F9ZH39;A0A5F9ZI69;A0A5F9ZHJ6;A0A5F9ZHL3;A0A5F9ZGS5;A0A5F9ZHL5;A0A5F9ZH17;A0A5F9ZI18;A0A5F9ZI56;A0A5F9ZGY1;A0A5F9ZHG3;A0A5F9ZHQ5;A0A994J7V8;A0A5F9ZHC9;A0A5F9ZI81;A0A5F9ZH70;A0A5F9ZGZ1;A0A5F9ZHQ3;A0A5F9ZI36;A0A5F9ZHA1;A0A5F9ZH58;A0A5F9ZI73;A0A5F9ZHY6;A0A5F9ZGS7;A0A5F9ZH34;A0A5F9ZH10;A0A5F9ZH35;E9PCH6;A0A5F9ZI16;A0A5F9ZH99;A0A5F9ZH18;A0A5F9ZGX8;B7Z2H4;A0A5F9ZI53;A0A5F9ZH38;Q01484-5;Q01484-2;A0A5K1VW73;B7Z678;Q7Z344;H0Y931;A0A5F9ZHV4;H0Y8Y2;H0YAG3;Q01484-7 ANK2;DKFZp686M09125 Ankyrin-2 yes no 0 0 1 1 0 1 32.686 32.686 3 1.7004E-06 7047 20230619_1880_Aki_TMTPro18x_K_F1 145 76.965 16667 11793 15444 14758 20694 18232 12194 8991.3 14163 22121 24167 27233 25929 25219 24185 28501 33895 29267 15389 10827 15851 14699 20824 17980 12860 10192 14761 21809 24423 27335 26354 26236 25180 28620 32305 27807 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34136000 20078 1573 18787 38087 30537 30537 1 9606 Homo sapiens -0.042172764032329724 NPQNSSQSADGLR Unmodified 1372.6331 0.63311924 3777 Q01081;B5BU08 U2AF1 Splicing factor U2AF 35 kDa subunit yes no 0 0 0 3 0.816 1 1 1 31.908 31.975 2 2.7003E-45 6286 20230619_1883_Aki_TMTPro18x_K_F4 298.78 264 37369 14498 44831 46695 63159 131030 55710 69048 93692 53771 68294 109190 92250 89564 83421 39851 96649 104180 34498 13572 45290 45471 64504 124410 57769 74333 92168 56988 72589 107440 93063 90414 85458 44608 92398 98245 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 86062000 20079 3777 18788 38088;38089;38090 30538;30539;30540 30540 3 9606 Homo sapiens -0.03829199774918379 NPQNSTVLAR Unmodified 1098.5782 0.57817054 1505 Q13428-4;A0A3B3IS06;Q13428-3;Q13428;Q13428-7;Q13428-6;Q13428-8;Q13428-2;E7ETY2;A0A6I8PRA0;B4DRA2;Q13428-5;H0Y8Y7;Q59FZ2 TCOF1 Treacle protein yes no 0 0 0 7 0.816 1 1 1 35.066 35.105 2 4.6178E-05 7492 20230619_1888_Aki_TMTPro18x_K_F8 166.34 130.72 58965 37092 51881 54181 66256 68526 63655 55494 87095 62479 71669 66513 74327 60943 61499 60497 81819 75662 54391 34133 53517 53472 67636 67902 65015 57802 86707 62971 74319 67155 75174 63063 63871 61658 78044 71726 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81849000 20080 1505 18789 38091;38092;38093 30541;30542 30542 2 9606 Homo sapiens 0.03282458215130646 NPQPSHFELPTYQK Unmodified 1684.8209 0.82092001 4247 Q8ND04-3;Q8ND04;Q8ND04-2 SMG8 Protein SMG8 yes no 0 0 0 8 0 1 48.368 48.434 3 0.0077346 12894 20230619_1888_Aki_TMTPro18x_K_F8 67.579 53.615 33055 26591 28808 29710 32380 32879 39102 34096 40961 39790 41530 37152 40542 36258 43214 41426 43286 38947 30530 24375 29680 29804 33512 33052 39075 34909 41642 39834 42524 37822 41547 37696 43888 41420 41385 37034 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31373000 20081 4247 18790 38094 30543 30543 1 9606 Homo sapiens 0.00590238429663259 NPQSTEPVLGGGEPPFHGHR Unmodified 2112.0137 0.013699589 4466 Q9BXW7-2;Q9BXW7;A8MYZ9;B3KVW8 CECR5 Cat eye syndrome critical region protein 5 yes no 0 0 0 5 0 1 39.084 39.175 4 5.9184E-16 9193 20230619_1885_Aki_TMTPro18x_K_F5 154.74 138.25 38274 31074 36448 45439 54019 49688 51721 55429 48076 45698 52332 58652 46705 50538 51260 47674 60885 58242 35376 28564 37490 44744 54560 50059 52173 55961 49351 47082 53310 58658 48147 52204 52553 48566 58143 55216 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174820000 20082 4466 18791 38095 30544 30544 1 9606 Homo sapiens 0.0021732875889028946 NPSAAFFCVAR Unmodified 1238.5866 0.58662674 899 A0A090N7V5;O75223;B8ZZK2;O75223-3;O75223-2;O75223-4;A0A0B4J1Y4 C7orf24;GGCT Gamma-glutamylcyclotransferase yes no 0 0 0 3.5 0.5 1 1 53.64 53.676 2 0.00046166 15653 20230619_1883_Aki_TMTPro18x_K_F4 144.47 114.66 89520 85797 81523 90187 83553 96323 96989 99164 113710 69743 69179 64521 62227 57840 88526 75851 74594 67742 82804 78556 83573 90842 87055 97020 97505 100320 112970 71974 72801 65575 65029 60807 88716 75526 71458 64453 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86489000 20083 899 18792 38096;38097 30545 30545 1 9606 Homo sapiens -0.023123111398945184 NPSAMAVESFMATAPFVQIGR Unmodified 2223.0816 0.0816445 198 A0A024R2F9;Q9BTV4;A0A0S2Z5N2 TMEM43 Transmembrane protein 43 yes no 0 0 0 4 0 1 65.239 65.249 3 1.3031E-13 20506 20230619_1883_Aki_TMTPro18x_K_F4 145.52 125.13 7451.8 5466.5 6449.8 7861.4 6389.9 8208.7 7501.9 6664.8 8842.2 8627.2 8799.8 9003.2 10702 7080.2 8463.8 10820 11822 11092 6878.4 5025.9 6644.4 7741.2 6685.1 8234.3 7539.4 6972.8 8932.5 8627 9113.4 9060.7 10746 7574.7 8843.5 10819 11274 10535 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9676900 20084 198 18793 38098 30546;30547 30546 2 9606 Homo sapiens 0.019026943030439725 NPSDSAVHSPFTK Unmodified 1385.6575 0.65754307 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;Q14157-1;Q14157-4;B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like no no 0 0 0 7 0.816 1 1 1 42.986 43.047 3 3.9707E-05 10483 20230619_1887_Aki_TMTPro18x_K_F7 114.21 99.332 204970 167030 174650 206510 180620 206100 197930 203600 189690 217080 226260 239520 230470 174020 186820 219140 247090 244420 189290 153260 180220 205280 187680 208380 198400 208560 195310 219210 230670 239840 232900 184180 194240 220800 235820 231900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200380000 20085 3877;3878 18794 38099;38100;38101 30548 30548 1 9606 Homo sapiens -0.01985939621408761 NPSGSYVSCTPR Unmodified 1323.5877 0.58774895 2683 B7Z390;Q59GF2;Q13444-11;Q13444-8;Q13444-2;Q13444-7;Q13444-6;Q13444-12;Q13444-5;Q13444-4;Q13444-3;Q13444;Q13444-13;Q13444-10;Q13444-9 ADAM15 Disintegrin and metalloproteinase domain-containing protein 15 yes no 0 0 0 8 0 1 36.405 36.391 2 0.00014407 8030 20230619_1888_Aki_TMTPro18x_K_F8 116.55 100.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20086 2683 18795 38102 30549 30549 1 9606 Homo sapiens -0.06110141561657656 NPSHVNELCSPK Unmodified 1380.6456 0.64559818 2765 CON__ENSEMBL:ENSBTAP00000007350;CON__P01030 yes no 0 0 0 6.5 0.5 1 1 37.453 37.523 3 1.0988E-05 8527 20230619_1886_Aki_TMTPro18x_K_F6 134.21 106.34 + 27615 24363 25378 29360 55661 65531 40185 39720 70254 32025 54466 77423 33927 37357 55912 33842 44407 57694 25531 22341 26454 29679 55106 62906 42296 42154 69070 34233 55903 75072 36376 39620 55718 35475 42692 54497 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57094000 20087 2765 18796 38103;38104 30550;30551 30550 2 9606 Homo sapiens -0.02949879636253172 NPSIYEK Unmodified 849.42323 0.42323303 533 A0A024R8R0;J3QQJ0;Q9UHR5-2;Q9UHR5;X6R3T8;J3QLH3;J3QLM2;J3KRR6 SAP30BP SAP30-binding protein yes no 0 0 0 5.5 0.5 1 1 42.5 42.589 2 0.015745 10602 20230619_1886_Aki_TMTPro18x_K_F6 114.89 69.176 162850 97584 156180 173110 193780 223670 190740 191460 251420 156820 204370 187400 188530 168870 195620 131110 239580 193050 150280 90048 159890 169110 198410 221420 194310 196900 250430 161510 211100 188240 193370 172860 200830 136060 228490 182880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144550000 20088 533 18797 38105;38106 30552 30552 1 9606 Homo sapiens -0.007501659192826082 NPSLMPK Unmodified 785.41056 0.41055985 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 1 0 1 45.072 45.072 3 0.019862 12271 20230619_1880_Aki_TMTPro18x_K_F1 77.058 45.122 31440 26730 26781 29162 34892 38613 34233 35737 48089 26994 31496 28086 33146 19523 33702 28922 30949 19706 29043 24492 27731 29382 35621 38266 34965 36462 47473 27820 33147 28199 33747 20940 34077 28418 29560 18855 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44031000 20089 4746 18798 38107 30553 30553 1 9606 Homo sapiens 0.009270994168218749 NPSLMPK Oxidation (M) 801.40547 0.40547447 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 1 0 8 0 1 39.405 39.392 2 0.058282 9202 20230619_1888_Aki_TMTPro18x_K_F8 74.255 39.155 85879 65462 70189 72224 106220 110250 84295 97343 116620 60478 73108 59027 60042 49495 81984 61045 74028 46074 79256 60013 73142 72898 106940 108320 87249 99276 115070 63162 76425 59759 62742 51962 82415 60404 70712 44022 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44037000 20090 4746 18798 38108 30554 30554 2894 1 9606 Homo sapiens -0.0031720444578695606 NPSSAAPVQSR Unmodified 1112.5574 0.5574351 1533 A0A3F2YNX0;A0A3F2YNZ0;F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5;A4QN18;A0A8I5KPG1;A4QN19 SEC16A Protein transport protein Sec16A yes no 0 0 0 6 0 1 30.949 30.981 2 0.023439 6129 20230619_1886_Aki_TMTPro18x_K_F6 70.1 35.292 2774.8 1125 2859.7 3040.6 3170.1 5196.2 5078.4 4189.5 3917.8 2795.1 3531.4 5064.4 3481.4 3413 4250.3 1376.7 4963.5 5796.9 2558.3 1048.5 2908.1 2936.5 3328 5057.8 4969.5 4314.2 4035.3 2969.5 3653.2 4971.9 3595.2 3471 4331.5 1672.5 4747.9 5456.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1400700 20091 1533 18799 38109 30555 30555 1 9606 Homo sapiens 0.0056586783548482344 NPSSLFSK Unmodified 878.44978 0.44978213 3008 G3V529;Q9GZR7;B4DM03;B4DKV2;Q9GZR7-2;Q59FS7;B4DGI6;Q9P054 DDX24 ATP-dependent RNA helicase DDX24 yes no 0 0 0 2.5 0.5 1 1 51.035 51.093 2 0.010087 14952 20230619_1881_Aki_TMTPro18x_K_F2 99.815 37.853 163450 142820 169040 186000 199210 216010 196610 195340 235690 195390 200660 179010 217100 153340 182280 212060 225470 187310 151250 131070 171810 184640 204460 215670 199580 200980 236440 197060 208070 181740 219240 162250 188500 210690 215040 178310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 189250000 20092 3008 18800 38110;38111 30556;30557 30556 2 9606 Homo sapiens 0.00569522972057257 NPSSPLYTTLGVITK Unmodified 1589.8665 0.86647322 3357 Q5J7U2;O95478 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog yes no 0 0 0 4 0 1 61.882 61.887 3 0.00055958 19117 20230619_1883_Aki_TMTPro18x_K_F4 84.41 57.381 99461 86278 100750 108580 95743 125760 96580 106070 125190 126980 114980 109370 140090 116710 118390 165750 139830 169130 92014 79157 102220 108020 100070 125360 98274 110250 125600 126720 119500 112190 141170 122790 122230 165790 133790 160500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128910000 20093 3357 18801 38112 30558 30558 1 9606 Homo sapiens 0.09513463892017171 NPSTNFQEPVQPLTQQQVAQMQLK Unmodified 2753.3807 0.38066329 3479 P19623;K7EL89 SRM Spermidine synthase yes no 0 0 0 1 0 1 59.827 59.827 3 1.713E-26 18419 20230619_1880_Aki_TMTPro18x_K_F1 184.56 170.54 33796 31627 31503 32134 23575 30133 29141 29151 31950 40030 40528 28989 43264 37928 41025 44534 42454 46986 31261 28952 32078 32406 25304 30612 29172 30140 32765 39538 41223 30286 43965 39195 41856 44771 40638 44585 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179890000 20094 3479 18802 38113 30559 30559 1 9606 Homo sapiens 0.07410818678636133 NPSTNFQEPVQPLTQQQVAQMQLK Oxidation (M) 2769.3756 0.37557791 3479 P19623;K7EL89 SRM Spermidine synthase yes no 0 1 0 8 0 1 54.861 54.928 4 8.8309E-05 15673 20230619_1888_Aki_TMTPro18x_K_F8 72.916 58.146 29446 25082 29525 37135 29982 28053 30876 31473 35001 40699 41636 38585 44029 35245 42022 47244 41405 43219 27235 23055 30029 36375 31092 29143 31223 32178 35720 40559 42494 39175 44744 37109 42762 47043 39634 41085 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118080000 20095 3479 18802 38114 30560 30560 2125 1 9606 Homo sapiens 0.061665148160045646 NPSTSLGPTLEPEEVVNR Unmodified 1937.9694 0.96943474 2846 D6RCD0;Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes no 0 0 0 4 0 1 52.542 52.566 2 9.503000000000001E-30 15169 20230619_1883_Aki_TMTPro18x_K_F4 271.73 244.4 14607 13872 14693 17678 15197 23092 19698 17496 18945 23437 19471 21203 21930 20768 18378 25253 24555 22166 13521 12725 14956 17600 15909 22794 19571 18422 19393 23299 20072 21604 22157 21663 19128 25113 23418 21095 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30857000 20096 2846 18803 38115 30561 30561 1 9606 Homo sapiens 0.03796879822061783 NPSTVCLCPEQPTCSNADSR Unmodified 2291.9569 0.95691427 1502 A0A3B3IRR6;A0A3B3IT54;A0A3B3ITA3;Q9H7E9;Q9H7E9-2 C8orf33 UPF0488 protein C8orf33 yes no 0 0 0 4 0 1 44.291 44.335 3 1.3736E-29 11454 20230619_1883_Aki_TMTPro18x_K_F4 196.31 192.82 22946 19032 21756 20287 23951 27727 25629 22686 30800 28954 26162 29681 33184 26333 23217 34358 35137 35396 21210 17436 22226 20491 24768 27363 25894 23694 30914 28961 27381 29978 33174 27710 24503 34420 33506 33608 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38583000 20097 1502 18804 38116 30562;30563 30563 2 9606 Homo sapiens -0.1373859096643173 NPSVNWK Unmodified 843.4239 0.42390173 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DM67 CSE1L Exportin-2 yes no 0 0 0 1.5 0.5 2 2 45.554 45.594 2;3 0.0051982 12397 20230619_1881_Aki_TMTPro18x_K_F2 107.32 83.761 817220 694410 751960 785690 830260 1022200 982310 866030 1030300 1011400 1073200 942810 1066100 841600 814860 922620 1143200 934310 755340 636480 770950 789140 861140 1012000 982770 899510 1048500 1012500 1097600 956960 1076200 876200 851620 926310 1089200 888050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 457800000 20098 1462 18805 38117;38118;38119;38120 30564;30565;30566 30566 3 9606 Homo sapiens -0.004073264795806608 NPTFLDYVRPR Unmodified 1376.7201 0.72008375 3550 P35610;B4DFD8;B7ZAT6;P35610-3;P35610-2 SOAT1 Sterol O-acyltransferase 1;O-acyltransferase yes no 0 0 1 4.5 0.5 1 1 51.19 51.242 3 0.00049151 14535 20230619_1883_Aki_TMTPro18x_K_F4 97.299 73.448 174050 148900 171900 161140 172830 183070 185840 182240 211280 194540 199410 189940 237220 183510 179850 220680 204560 201480 160970 136420 174740 162130 179760 183520 187440 186550 213350 195860 206690 192910 238070 191540 185480 219990 195460 191580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117060000 20099 3550 18806 38121;38122 30567;30568 30567 2 9606 Homo sapiens 0.0467925123743953 NPTIVNFPITNVDLR Unmodified 1711.9257 0.92571943 2722 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;Q53GS9-2;B3KPG7;B3KMG1 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 0 0 0 2 0 1 62.206 62.216 3 0.021827 19592 20230619_1881_Aki_TMTPro18x_K_F2 57.703 27.68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20100 2722 18807 38123 30569 30569 1 9606 Homo sapiens 0.09823359906204132 NPVDYIQGLLDLK Unmodified 1486.8031 0.80314468 283 Q53S54;A0A024R475;Q13618-2;Q13618;B7Z600;Q13618-3 CUL3 Cullin-3 yes no 0 0 0 2 0 1 66.359 66.366 3 0.020725 21379 20230619_1881_Aki_TMTPro18x_K_F2 58.071 38.86 4570.4 4022.6 4387.2 6780.6 4892.4 4580.1 6796.1 5356.1 5620.6 5734.5 5406 6817.3 7058 5770.9 4101.3 8415.9 9046.5 9922.3 4226.7 3703.2 4494.8 6585.2 5081.4 4815.4 6700.4 5438 5786.9 5806.4 5636.4 6836.6 7015.4 6130.5 4519.4 8483.4 8613.9 9405.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3466000 20101 283 18808 38124 30570 30570 1 9606 Homo sapiens 0.07921523174809408 NPVIAQK Unmodified 768.44939 0.4493882 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 4.5 3.5 1 1 41.066 41.062 2 0.0038461 9903 20230619_1888_Aki_TMTPro18x_K_F8 152.26 84.373 277970 144220 335140 347490 381560 410700 316840 396530 369360 296560 494360 540850 398820 410210 449360 190080 511130 496640 256880 133870 336400 334660 390760 409760 325290 403320 377730 312480 497540 532990 412900 415780 457970 212630 488350 468520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290160000 20102 2088 18809 38125;38126 30571;30572 30572 2 9606 Homo sapiens 0.055901480428588 NPVMELNEK Oxidation (M) 1088.5172 0.51720977 3823;1133 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;B4DDF3;A0A0S2Z5K8;V9HWK4;Q96SI9-2;Q96SI9 ILF3;HEL162;STRBP Interleukin enhancer-binding factor 3;Spermatid perinuclear RNA-binding protein no no 0 1 0 3.5 0.5 1 1 45.698 45.758 2 0.0059659 12018 20230619_1883_Aki_TMTPro18x_K_F4 89.08 12.798 87744 72474 77322 86782 95636 106720 94564 98947 118250 100840 118160 117080 113330 98637 99217 117830 120980 112540 81059 66471 79749 86722 97931 106220 96143 101650 119060 102340 121000 117530 115180 103340 102440 117760 115480 106980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119460000 20103 3823;1133 18810 38127;38128 30573 30573 703 1 9606 Homo sapiens -0.023508148793325745 NPVMELNEK Unmodified 1072.5223 0.52229515 3823;1133 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;B4DDF3;A0A0S2Z5K8;V9HWK4;Q96SI9-2;Q96SI9 ILF3;HEL162;STRBP Interleukin enhancer-binding factor 3;Spermatid perinuclear RNA-binding protein no no 0 0 0 4.5 0.5 2 2 49.632 49.688 2;3 3.8764E-05 13588 20230619_1885_Aki_TMTPro18x_K_F5 134.68 98.966 304940 247070 278160 300610 297680 340510 328970 322740 374070 387220 394940 404260 438660 364180 339920 440290 426740 392170 281750 226660 285250 299720 308680 340890 331290 332670 379520 388410 406090 408290 441610 380960 352720 438280 407220 373120 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 624230000 20104 3823;1133 18810 38129;38130;38131;38132 30574;30575;30576 30575 3 9606 Homo sapiens -0.011065110167010062 NPVQCYEK Unmodified 1036.4648 0.46478027 4349 Q96FV9;Q96FV9-2;R4GN58 THOC1 THO complex subunit 1 yes no 0 0 0 6 0 1 42.561 42.655 2 0.0070555 10595 20230619_1886_Aki_TMTPro18x_K_F6 108.74 65.496 30822 19888 29743 29460 31881 35628 32621 30336 41053 26065 25379 21255 27921 21165 23861 25132 32304 20206 28454 18302 30334 29035 32984 35424 33096 31248 40682 26464 26857 21813 28223 22054 24802 24917 30743 19288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7547200 20105 4349 18811 38133 30577 30577 1 9606 Homo sapiens -0.05199353222269565 NPVTIFSLATNEMWR Oxidation (M) 1793.8771 0.87705468 1034 A0A0G2JLD8;E7EUY5;Q567R6;A4D1U3;B7Z268;Q04837;C9K0U8 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial yes no 0 1 0 3 0 1 63.663 63.694 3 0.035976 19992 20230619_1882_Aki_TMTPro18x_K_F3 44.598 36.684 14999 13194 11275 19159 17164 23759 16861 25546 38272 28163 11451 18092 25121 20320 13637 34593 24223 22060 13847 12123 11907 18901 17448 23694 17664 26002 36728 28043 13635 18891 24682 21636 14768 33766 23059 21093 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135280000 20106 1034 18812 38134 30578 30578 603 1 9606 Homo sapiens 0.011871232748035254 NPVTIFSLATNEMWR Unmodified 1777.8821 0.88214006 1034 A0A0G2JLD8;E7EUY5;Q567R6;A4D1U3;B7Z268;Q04837;C9K0U8 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial yes no 0 0 0 4.5 0.5 2 2 65.306 65.333 2;3 3.5467000000000004E-33 20295 20230619_1885_Aki_TMTPro18x_K_F5 206.63 190.99 32092 20940 23135 24530 21989 58028 25983 25517 97885 34239 30872 41039 33238 38883 33673 50466 47885 45606 29569 19220 24278 24882 23496 55295 28103 28529 92754 34549 34970 41268 34003 40728 35110 50205 45663 43376 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 79087000 20107 1034 18812 38135;38136;38137;38138 30579;30580;30581 30580 3 9606 Homo sapiens 0.024314271374350938 NPVVNHPCATR Unmodified 1263.6142 0.61423847 1291 B3KMJ1;A0A1S5UYZ9;O60879-2;A8K5F7;Q17R91;B7ZLJ0 DIAPH2 yes no 0 0 0 7.5 0.5 1 1 29.12 29.185 3 4.9112E-05 5460 20230619_1888_Aki_TMTPro18x_K_F8 118.77 96.568 14647 12909 14074 15224 22123 17166 15783 14305 16741 12621 16117 15611 17090 14680 13408 13962 22378 14483 13546 11835 14461 15209 22116 17168 16309 14776 16971 12949 16601 15685 17248 15133 14192 14073 21270 13780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5887500 20108 1291 18813 38139;38140 30582;30583 30583 2 9606 Homo sapiens -0.007024078796803224 NPVWYQALTHGLNEEQR Unmodified 2053.997 0.99698689 3354 O95373;B3KQG6;B3KNG9 IPO7 Importin-7 yes no 0 0 0 7.5 0.5 1 1 58.008 58.057 3 1.1391E-48 16961 20230619_1888_Aki_TMTPro18x_K_F8 286.14 265.75 107650 73636 94119 100270 70147 108220 96096 89645 110810 124000 107130 112220 134910 105030 112400 133950 110760 132580 99339 67679 96446 99140 75751 108320 95862 93810 112020 123130 111330 114190 135660 110180 114730 134000 106140 125860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 279060000 20109 3354 18814 38141;38142 30584;30585 30585 2 9606 Homo sapiens 0.012148278729455342 NPVWYQALTHGLNEEQRK Unmodified 2182.0919 0.09194991 3354 O95373;B3KQG6;B3KNG9 IPO7 Importin-7 yes no 0 0 1 2 0 1 54.799 54.823 4 1.2535E-13 16521 20230619_1881_Aki_TMTPro18x_K_F2 154.12 136.42 87610 81765 98177 74511 63017 87333 68153 60185 61615 106690 93183 71332 114280 76962 101430 113780 107010 77745 81162 74785 98175 76111 68469 86756 68334 64613 64633 104220 94908 74293 115200 81224 103730 111700 102130 74331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 351930000 20110 3354 18815 38143 30586 30586 1 9606 Homo sapiens 0.04818761344131417 NPWGEVEWTGR Unmodified 1329.6102 0.61019895 4021 Q59EF6;B4E1R7;B2RCM3;P17655;B4DN77;P17655-2 CAPN2 Calpain-2 catalytic subunit yes no 0 0 0 5 0 1 56.162 56.224 2 7.2431E-06 16362 20230619_1885_Aki_TMTPro18x_K_F5 153.66 126.34 80978 62176 62935 62896 61283 71846 82248 86290 95694 92363 101090 99136 104010 86263 112670 106140 114300 124890 74711 56956 65423 63644 64438 72319 82132 87279 96914 93210 103610 99930 106450 90503 114470 107410 109420 118380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141340000 20111 4021 18816 38144 30587 30587 1 9606 Homo sapiens -0.04142174101730234 NPYYGGESASITPLEDLYK Unmodified 2116.0001 6.61646E-05 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q5SX87;V9GYF8;Q5SX90;V9GYJ7 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 0 4.5 1.12 1 1 1 1 62.28 62.314 3 4.3013E-07 18954 20230619_1885_Aki_TMTPro18x_K_F5 99.021 87.582 128460 102490 117170 113450 92752 133610 132970 149200 146310 157720 155980 153060 164460 158720 141820 180810 170130 194750 118680 93944 119630 114020 99628 133870 132220 151480 148730 158770 159920 155850 166650 164660 146400 182010 162680 184740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3132599999.9999995 20112 2533 18817 38145;38146;38147;38148 30588 30588 1 9606 Homo sapiens -0.013293865835294127 NPYYGGESSSITPLEELYK Unmodified 2146.0106 0.010630851 1080 A0A0S2Z3X8;P31150;B4DHX4;B4DH24;G5E9U5;A0A0S2Z426 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 5.5 0.5 1 1 62.24 62.29 3 4.6725E-15 19148 20230619_1886_Aki_TMTPro18x_K_F6 164.53 146.28 149680 127450 154040 169530 85849 123030 125090 113260 142640 215450 222830 201850 197480 205840 169250 207460 239210 282560 138470 117000 155190 167110 95850 127670 124550 119250 147720 211780 223540 205630 201300 212280 176690 212520 228500 267420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2149800000 20113 1080 18818 38149;38150 30589 30589 1 9606 Homo sapiens -0.01653403929049091 NPYYGGESSSITPLEELYKR Unmodified 2302.1117 0.11174188 1080 A0A0S2Z3X8;P31150;B4DHX4;B4DH24;G5E9U5;A0A0S2Z426 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 1 8 0 1 58.445 58.492 3 4.3744E-16 17179 20230619_1888_Aki_TMTPro18x_K_F8 155.49 140.57 37830 57531 54476 51787 44679 37656 50784 40278 29976 46299 47902 21658 29848 18470 76299 15653 18740 12328 35295 52548 53775 52652 47147 39304 50243 41177 32480 45672 47439 23030 33114 19062 73255 15793 18443 11768 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11200000 20114 1080 18819 38151 30590 30590 1 9606 Homo sapiens 0.012770477736467 NQAAIQGRPPYAASAEEVAK Unmodified 2070.0494 0.049416394 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;A0A0C4DG79;A0A494C0Y9 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 0 1 6.5 0.5 1 1 43.756 43.842 3 4.9107E-16 10820 20230619_1887_Aki_TMTPro18x_K_F7 156.08 115.84 53845 40974 44123 51208 45655 54551 60548 57796 70771 72320 72797 62324 75941 74646 68803 81144 69808 68289 49693 37608 45711 50917 47765 54973 60483 59202 71607 72030 74660 64195 77130 76882 70215 80698 66771 65003 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129280000 20115 1839 18820 38152;38153 30591 30591 1 9606 Homo sapiens 0.05719366215953414 NQAAQAAKPEDPR Unmodified 1394.6902 0.69024019 2634 Q9NYZ3;B4DZT6 GTSE1 G2 and S phase-expressed protein 1 yes no 0 0 1 5 0 1 32.882 32.964 3 0.084263 6785 20230619_1885_Aki_TMTPro18x_K_F5 42.209 18.378 6400.3 4333.2 6369.3 5295.2 6488.7 9128.6 7084.2 7529.8 7564.2 7689.7 9108.4 5652.9 6997.3 7796.7 5025.7 4703.2 8896 4843.1 5911.5 3978.3 6470.9 5320.3 6761.7 8896.7 7127 7799.5 7737.2 7705.2 9152.4 5910.2 7129.5 7802.6 5355 4788.9 8446.1 4613.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11920000 20116 2634 18821 38154 30592 30592 1 9606 Homo sapiens 0.008682675014370034 NQALFPACVLK Unmodified 1259.6696 0.66962808 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A087X2G1;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 3.67 0.471 1 2 59.422 59.434 2;3 6.9878E-06 18133 20230619_1882_Aki_TMTPro18x_K_F3 180.44 131.02 116130 100990 104940 113050 91338 109740 120570 113820 139550 108310 99176 87438 105790 86671 113720 113940 107610 100450 107340 92545 107390 113170 96845 111320 120430 115880 139400 109190 103910 89763 108130 90891 115160 113310 102970 95579 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 208390000 20117 1661 18822 38155;38156;38157 30593;30594;30595 30593 3 9606 Homo sapiens 0.05018005588090091 NQAPPGLYTK Unmodified 1087.5662 0.56620887 3376 Q5T6L4;P00966;B4E395 ASS;ASS1 Argininosuccinate synthase yes no 0 0 0 4.5 3.5 1 1 44.67 44.67 2;3 0.00028329 12161 20230619_1880_Aki_TMTPro18x_K_F1 113.93 88.709 49169 33503 54983 96024 147310 132900 118010 121890 125690 68958 101030 128500 86717 89338 97814 78729 110940 118920 45462 31170 57005 92100 144650 131260 120810 123870 126440 74405 104420 126350 89619 92820 99886 81607 106070 112500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91713000 20118 3376 18823 38158;38159 30596;30597 30596 2 9606 Homo sapiens 0.025928414719373905 NQDATVYVGGLDEK Unmodified 1507.7155 0.71545188 2421 Q53FG6;B3KUJ0;Q15427 SF3B4 Splicing factor 3B subunit 4 yes no 0 0 0 3 0.816 1 1 1 51.144 51.193 3 3.0247E-12 14645 20230619_1882_Aki_TMTPro18x_K_F3 189.09 147.87 380950 309700 358080 370940 401190 422190 444440 438610 517370 454280 485100 429640 496930 415020 424250 509790 475980 446190 352070 284070 366390 370360 414410 423480 447800 447290 521480 457670 499300 437150 503330 433570 436010 507000 454710 424580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 969780000 20119 2421 18824 38160;38161;38162 30598;30599 30598 2 9606 Homo sapiens -0.01809722486609644 NQDECVIALHDCNGDVNR Unmodified 2127.9062 0.90619933 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;Q5VU77;Q5VU79;Q5VU78;Q5VU81;Q5VU80;Q14157-1;Q14157-4 UBAP2L Ubiquitin-associated protein 2-like no no 0 0 0 1.5 0.5 1 1 41.05 41.087 3 9.3692E-39 10292 20230619_1881_Aki_TMTPro18x_K_F2 257.02 247.33 59000 40458 53380 60101 48594 58366 58724 64263 63800 64532 61659 53611 70857 59862 57418 74816 66617 75293 54458 37222 54667 59041 51176 59250 58807 65233 64649 64870 63704 55196 71391 62355 59230 74913 63710 71477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326940000 20120 3877;3878 18825 38163;38164 30600 30600 1 9606 Homo sapiens -0.11263752229160673 NQDEESQEAPELLK Unmodified 1628.753 0.7529596 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 1.5 0.5 1 1 49.037 49.069 3 5.7786E-06 13972 20230619_1880_Aki_TMTPro18x_K_F1 119.32 98.934 173120 154210 159920 168660 148280 171130 166570 186750 209460 198270 210500 202180 251780 201980 175360 248170 233820 200770 160070 141280 163430 169270 155590 173250 168310 189950 211010 199900 217570 205210 251990 210770 183270 245800 222920 191320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 774440000 20121 1296 18826 38165;38166 30601;30602 30601 2 9606 Homo sapiens -0.03626676011685959 NQDHYAVLGLGHVR Unmodified 1577.8063 0.806273 4403 Q99543-2;Q99543;H7C3L7;C9IZ83;F2Z3H0;F2Z3N9;Q6P5S9 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes no 0 0 0 7.5 0.5 1 1 40.043 40.07 4 5.2855E-15 9519 20230619_1888_Aki_TMTPro18x_K_F8 194.3 181.42 47186 34837 45355 44143 42149 52510 54893 43515 56726 43035 50790 51466 57594 47524 46324 58012 54926 48981 43591 31983 46185 43924 44417 52239 54637 45105 57392 43818 52688 51762 58028 49690 47841 57595 52428 46640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112780000 20122 4403 18827 38167;38168 30603 30603 1 9606 Homo sapiens 0.0404821107213138 NQDLEFER Unmodified 1049.4778 0.47778779 3485 Q59FI0;Q9HBB2;V9HWB7;P21399 IRP1;HEL60;ACO1 Aconitate hydratase;Cytoplasmic aconitate hydratase yes no 0 0 0 1 0 1 41.21 41.21 2 0.0088203 10640 20230619_1880_Aki_TMTPro18x_K_F1 103.55 80.118 32176 21364 26186 36072 39177 45910 44002 44360 62388 34466 46418 50992 43259 45079 41986 44148 52158 51229 29671 19690 27369 35310 39861 45604 44612 45161 61759 35926 48265 50821 44267 46604 43289 44777 49800 48586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29807000 20123 3485 18828 38169 30604 30604 1 9606 Homo sapiens -0.044971988385441364 NQDRPSLLK Unmodified 1069.588 0.58800695 2046 Q5SZE3;H0YKH6;Q5SZE4;Q5SZE1;H0YNU7;A8K4M4;Q96G23 CERS2 Ceramide synthase 2 yes no 0 0 1 1 0 1 38.989 38.989 3 0.0026139 9636 20230619_1880_Aki_TMTPro18x_K_F1 101.38 70.819 184380 126540 159690 210210 207840 244810 255690 233300 343730 254300 236330 245820 311490 257460 192610 316940 279720 246560 170130 116580 165390 205660 213660 244490 257460 239730 340730 255910 250720 250440 309950 268270 203430 313260 266570 235050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168700000 20124 2046 18829 38170 30605 30605 1 9606 Homo sapiens 0.055996462205030184 NQEDNTGKYPDIISR Unmodified 1748.8329 0.83294126 1840 B4DUE1;A0A8V8TQC8;M0R0Q7;Q59HG7;F5GZ28;B4DM52;A0A8V8TP03;A0A8V8TNZ9;A0A8V8TPH8;A0A8V8TQQ7;A0A8V8TQC4;P18858-2;P18858-3;P18858 LIG1 DNA ligase;DNA ligase 1 yes no 0 0 1 5 0 1 44.104 44.183 3 0.00016027 11281 20230619_1885_Aki_TMTPro18x_K_F5 94.922 77.703 40192 32558 38652 33158 34037 41204 42869 40890 43709 45271 51135 38857 47807 39369 45556 38466 41256 32798 37150 29820 39297 33579 35980 41054 42751 41901 44769 45324 51888 39785 48764 40550 46084 38389 39457 31243 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30011000 20125 1840 18830 38171 30606 30606 1 9606 Homo sapiens -0.011521896178010138 NQEQLAAELAEFTAK Unmodified 1661.8261 0.82606496 2184 P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;P35241-2 RDX Radixin yes no 0 0 0 4.5 0.5 1 1 62.961 62.988 3 8.5783E-16 19592 20230619_1883_Aki_TMTPro18x_K_F4 194.01 174.44 40812 37645 44892 44381 30564 35977 39594 44914 43916 54887 55500 49478 54847 44961 46372 62909 51637 56334 37799 34509 45043 44184 33131 37229 39585 45524 44995 54737 56319 50361 55580 47481 47690 62509 49388 53559 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1177300000 20126 2184 18831 38172;38173 30607 30607 1 9606 Homo sapiens 0.02162497501603866 NQFQAFTQPATDGLSEPDVFAIAPFR Unmodified 2866.3926 0.39260819 915 A0A096LP25;L0R804;A0A096LNZ0;Q6ZSR9 AAK1 Uncharacterized protein FLJ45252 yes no 0 0 0 8 0 1 65.107 65.127 3 0.06414 19989 20230619_1888_Aki_TMTPro18x_K_F8 50.945 46.594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20127 915 18832 38174 30608 30608 1 9606 Homo sapiens 0.034067586934270366 NQGDEEGTEIDTLQFR Unmodified 1850.8282 0.82824981 1354 A0A2R8YEY5;A0A2R8YEZ4;Q96HT3;A0A2R8Y5D3;O15160-2;O15160;D6RDJ3;E7EQB9 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes no 0 0 0 1 0 1 51.582 51.582 2 1.1029E-19 15009 20230619_1880_Aki_TMTPro18x_K_F1 262.43 228.56 21923 21180 20883 23154 20210 26146 26163 26806 31517 29000 26537 22795 32329 23892 26741 34076 27029 29290 20286 19399 21313 23268 21244 26223 26196 27388 31609 29011 27687 23489 32522 25164 27348 33788 25874 27863 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27780000 20128 1354 18833 38175 30609 30609 1 9606 Homo sapiens -0.06313118551270236 NQGGGLSSSGAGEGQGPK Unmodified 1586.7285 0.72847619 3402 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 4.5 0.5 1 1 36.694 36.763 3 5.1314E-24 8186 20230619_1885_Aki_TMTPro18x_K_F5 207.53 188.8 47690 28189 59631 64095 94719 120110 67319 88122 88706 71712 112510 127710 101590 105560 95794 47422 119430 123720 44112 26119 60152 62402 95008 116330 70194 91715 90014 75101 113920 126200 103880 106530 98537 53039 114070 116690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 279670000 20129 3402 18834 38176;38177 30610;30611 30611 2 9606 Homo sapiens -0.04141891374547413 NQGGYGGSSSSSSYGSGR Unmodified 1693.6928 0.69281896 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;Q6IPF2;Q9BSM5;A0A7I2YQX9;B4E0B5;A0A2R8Y4L2;H0YH80;Q3MI39;A0A7I2YQY2 HNRNPA1;HNRPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 4.69 1.77 2 2 2 2 2 3 30.542 30.615 2;3 9.9605E-24 6000 20230619_1883_Aki_TMTPro18x_K_F4 197.1 190.8 33125 22607 40933 41738 58707 67398 49638 53434 58306 55948 70307 75589 77366 63650 63701 34014 85408 78845 30658 20860 41210 40870 59339 65839 50859 55593 59388 57018 71902 75340 78076 64557 66035 37272 81462 74436 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 7745399999.999999 20130 640 18835 38178;38179;38180;38181;38182;38183;38184;38185;38186;38187;38188;38189;38190 30612;30613;30614;30615;30616;30617 30614 6 9606 Homo sapiens -0.1262797362217043 NQGLTVFETGQK Unmodified 1320.6674 0.66737948 3280 Q59H56;Q5SRN1;Q53H60;O60508;Q2TA76;H0UI46 CDC40 Pre-mRNA-processing factor 17 yes no 0 0 0 7 0 1 51.478 51.555 3 1.6555E-05 14285 20230619_1887_Aki_TMTPro18x_K_F7 104.59 85.518 68769 43114 66833 62639 62133 76029 74907 69500 93931 70214 73805 71040 78101 65634 66323 90785 85306 69848 63481 39672 67970 61822 65341 75671 75354 71480 93733 71011 76828 71961 79043 69179 68827 89587 81330 66621 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 306030000 20131 3280 18836 38191 30618 30618 1 9606 Homo sapiens 0.019872483839890265 NQHLVSQQK Unmodified 1080.5676 0.56760585 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 7.5 0.5 1 1 31.675 31.725 3 0.0235 6283 20230619_1888_Aki_TMTPro18x_K_F8 61.78 48.108 15378 9514.4 15611 15849 20441 22472 17592 22237 19959 17376 21028 21818 19180 15375 18774 16176 21939 19608 14200 8770.5 15912 15564 20775 22202 17990 22584 20234 17951 21450 21724 19609 16120 19256 16445 20945 18596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28882000 20132 3440 18837 38192;38193 30619 30619 1 9606 Homo sapiens 0.030544755607024854 NQLCEIPK Unmodified 1000.5012 0.50116577 1188 A0A140VJN3;Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes no 0 0 0 6 0 1 45.982 46.069 2 0.0050085 12152 20230619_1886_Aki_TMTPro18x_K_F6 103.83 70.992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20133 1188 18838 38194 30620 30620 1 9606 Homo sapiens 0.0009352367445671916 NQLESLQR Unmodified 986.51451 0.51450765 3181 L0R6Q1 SLC35A4 yes yes 0 0 0 5 0 1 38.779 38.87 2 7.1242E-07 9056 20230619_1885_Aki_TMTPro18x_K_F5 205.58 112.39 72149 61936 59909 73665 91564 98381 96702 87974 121610 74014 99653 92620 83535 83289 89060 87782 115740 98018 66641 56794 62453 73734 92781 97372 97881 90238 121390 76229 102530 92930 86160 86405 91922 88728 110360 93054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153440000 20134 3181 18839 38195 30621 30621 1 9606 Homo sapiens 0.0207109777804817 NQLLPELQVIHNR Unmodified 1572.8736 0.87362428 4665 Q9UI26;Q9UI26-2;F8WDV0;B3KN03 IPO11 Importin-11 yes no 0 0 0 1 0 1 52.076 52.076 3 2.3162E-08 15227 20230619_1880_Aki_TMTPro18x_K_F1 164.22 138.88 29325 22667 31919 33992 28046 32498 34260 34150 40229 35636 32185 33611 40575 31404 31115 38883 37264 37461 27127 20846 32166 33369 29614 32997 34370 34819 40328 35882 33770 34140 40682 32879 32187 38852 35596 35595 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221480000 20135 4665 18840 38196 30622 30622 1 9606 Homo sapiens 0.11010241283133837 NQLLSCSADGTVR Unmodified 1419.6776 0.67762659 1887 A0AV58;Q13033-2;Q13033 STRN3 Striatin-3 yes no 0 0 0 6 0 1 43.138 43.232 2 5.1986E-26 10877 20230619_1886_Aki_TMTPro18x_K_F6 253.97 219.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20136 1887 18841 38197 30623 30623 1 9606 Homo sapiens -0.015425119531073506 NQLTAMSSVLAK Unmodified 1261.67 0.67002202 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 3.5 0.5 1 1 57.616 57.634 3 7.7145E-06 17462 20230619_1882_Aki_TMTPro18x_K_F3 137.84 125.21 135500 116940 123480 127230 120660 146620 145120 139220 157390 165040 143370 133940 175100 140290 147340 178980 152570 149800 125240 107140 126440 127950 126340 146630 145280 143410 159210 164490 149090 137660 176320 146580 150780 177530 145900 142600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 435610000 20137 3152 18842 38198;38199 30624 30624 1 9606 Homo sapiens 0.049653805172965804 NQLTSNPENTVFDAK Unmodified 1676.8006 0.8005785 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 5.2 0.748 1 2 2 52.227 52.292 2;3 6.1285E-14 14696 20230619_1885_Aki_TMTPro18x_K_F5 173.71 134.7 504580 376700 434580 475240 433800 479180 540420 580900 606400 642050 626630 554190 721780 609750 597310 690190 726950 678220 465780 345820 447570 472020 453700 486560 540850 587790 615150 642850 645580 568850 727790 631550 617200 691390 693950 644480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3100999999.9999995 20138 3429 18843 38200;38201;38202;38203;38204 30625;30626;30627 30626 3 9606 Homo sapiens -0.010749770208349219 NQLVTPEPTSR Unmodified 1240.6412 0.64116473 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;A0A1U9XBD9;A0A1U9XBC3;Q14676-3;B4DYH4 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 0 5 0 1 38.85 38.942 2 1.3399E-08 9067 20230619_1885_Aki_TMTPro18x_K_F5 179.81 139.03 45764 35240 32972 36317 32738 40500 38044 37524 48447 41840 46036 36369 47654 42590 40308 49904 47833 40460 42203 32286 34578 36659 34252 40575 38371 38653 48645 41920 47342 37438 48257 44096 41583 49481 45643 38557 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53465000 20139 1308 18844 38205 30628 30628 1 9606 Homo sapiens 0.03046979212513179 NQMLISEDSR Oxidation (M) 1207.5503 0.55030081 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-5;Q59FV9;Q9NSQ6;H0Y8F1;H7C5L0 PTK7;DKFZp434L0319 Inactive tyrosine-protein kinase 7 yes no 0 1 0 2 0 1 36.651 36.709 2 0.0044777 8378 20230619_1881_Aki_TMTPro18x_K_F2 88.267 70.447 24970 17586 21977 21514 25347 33706 27378 28053 37784 33623 41411 45535 34195 32625 36440 36777 41616 42832 23046 16143 22631 21563 26187 33011 27807 29187 38016 34052 42029 45226 35263 34280 37303 37231 39776 40613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40569000 20140 3847 18845 38206 30629 30629 2523 1 9606 Homo sapiens -0.04517232827288353 NQMLISEDSR Unmodified 1191.5554 0.55538619 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-5;Q59FV9;Q9NSQ6;H0Y8F1;H7C5L0 PTK7;DKFZp434L0319 Inactive tyrosine-protein kinase 7 yes no 0 0 0 3 0 1 41.756 41.818 2 0.00017044 10371 20230619_1882_Aki_TMTPro18x_K_F3 123.11 100.62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20141 3847 18845 38207 30630 30630 1 9606 Homo sapiens -0.03272928964656785 NQNAPDSRPEENFFSR Unmodified 1906.8558 0.85580196 4541 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 1 4 0 1 41.837 41.88 3 2.9285E-14 10386 20230619_1883_Aki_TMTPro18x_K_F4 171.78 159.02 65278 42956 53836 57443 74751 70102 63887 81605 98019 67757 81162 87472 65945 66245 76056 85870 80109 79880 60199 39481 55956 56996 75698 70202 66118 82134 97138 69845 83447 87210 68355 69991 77443 85618 76607 75934 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65111000 20142 4541 18846 38208 30631 30631 1 9606 Homo sapiens -0.06135170500374443 NQNDPLPGR Unmodified 1009.4941 0.49410656 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;E9PLT0;E9PNG3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;A0A8I5KPQ8;A0A8I5KS07;A0A8I5KW29 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 0 3 0.816 1 1 1 34.413 34.469 2 0.00048273 7348 20230619_1882_Aki_TMTPro18x_K_F3 154.12 117.56 154530 99530 136170 146520 149090 175950 160770 162000 216880 170540 179900 140270 197560 144410 133210 135540 197150 134660 142560 91587 140130 144430 154380 175270 163120 166650 216160 171120 186710 143980 197910 148510 140090 136330 187580 128140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 261400000 20143 88 18847 38209;38210;38211 30632;30633 30632 2 9606 Homo sapiens -0.01026072881768414 NQNSWGTGEDVK Unmodified 1333.5899 0.58985744 3482 P20700;B4DZT3 LMNB1 Lamin-B1 yes no 0 0 0 3.5 0.5 1 1 43.556 43.613 3 9.6952E-10 11086 20230619_1883_Aki_TMTPro18x_K_F4 174.72 156.91 288690 256240 277730 238410 332120 351180 247980 270690 337690 329270 356440 321040 376360 307030 337190 284790 342120 277070 267000 234450 283520 243940 338510 344950 257890 283480 339850 329530 365410 325770 381470 316060 343510 286390 326840 263480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 626220000 20144 3482 18848 38212;38213 30634;30635 30635 2 9606 Homo sapiens -0.06359389552198991 NQPEVDMSDR Oxidation (M) 1205.4983 0.49826524 2182 B0YJ73;Q15404 RSU1 Ras suppressor protein 1 yes no 0 1 0 1 0 1 30.65 30.65 2 0.068544 6186 20230619_1880_Aki_TMTPro18x_K_F1 58.699 38.913 6556.7 4948.5 5433.3 5026.1 8547.7 9224.3 7251.7 8686 10045 8717.6 8236.9 10089 11817 9242.2 8772.4 10038 9461.9 7451.7 6051.2 4533.5 5657.1 5128.3 8603.8 8997.9 7472.8 8900.9 10008 8853.5 8702.6 10146 11797 9601.3 9017.7 9929.1 9032.5 7112.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14130000 20145 2182 18849 38214 30636 30636 1354 1 9606 Homo sapiens -0.09626396241014845 NQPEVDMSDR Unmodified 1189.5034 0.50335062 2182 B0YJ73;Q15404 RSU1 Ras suppressor protein 1 yes no 0 0 0 1.5 0.5 1 1 36.59 36.619 2 2.2254E-09 8599 20230619_1880_Aki_TMTPro18x_K_F1 200.09 158.11 28071 24302 28022 28211 30296 39476 34324 34564 50542 44625 41055 40195 47008 40864 36910 43175 49834 38247 25966 22279 28517 28320 31473 38938 34862 35899 50192 44457 42808 41019 47331 42246 38452 43065 47475 36422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30623000 20146 2182 18849 38215;38216 30637 30637 1 9606 Homo sapiens -0.08382092378406014 NQPQFQQMR Unmodified 1175.5506 0.55057558 3653 P54727;B4DEA3;Q53F10;B7Z4W4;B7ZA74;P54727-2 RAD23B UV excision repair protein RAD23 homolog B yes no 0 0 0 7.5 0.5 1 1 37.783 37.768 2 6.833E-05 8544 20230619_1888_Aki_TMTPro18x_K_F8 160.78 144.9 131240 117610 110220 101020 128300 169030 142920 138080 218530 56533 51964 52671 49044 44949 81668 61573 68278 49129 121260 107540 113980 104380 132640 165030 145410 140980 211160 61747 61087 53470 51808 47467 81613 60983 65324 46865 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72841000 20147 3653 18850 38217;38218 30638;30639;30640 30639 3 9606 Homo sapiens -0.03017768316749425 NQPTNVTLSSGFVADR Unmodified 1704.8431 0.84311201 4347 Q99575;Q96F88;E5RK39 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 0 6.5 0.5 1 1 48.95 49.032 3 4.8294E-26 13120 20230619_1887_Aki_TMTPro18x_K_F7 190.19 170.08 67284 46739 56375 59745 56819 65512 56046 56014 69548 69858 63678 68120 76022 64812 63000 74560 73050 69879 62073 42926 58195 59335 59038 65586 56989 58256 69904 69826 66172 69099 76589 67476 64907 74482 69775 66432 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 296860000 20148 4347 18851 38219;38220 30641 30641 1 9606 Homo sapiens 0.018884181074099615 NQQIFLR Unmodified 917.5083 0.50830006 1416 A0A384ME16;Q6ICN0;B0LPF3;P62993;P62993-2;J3QLF6 GRB2 Growth factor receptor-bound protein 2 yes no 0 0 0 1.5 0.5 1 1 43.73 43.771 2 0.0026741 11538 20230619_1881_Aki_TMTPro18x_K_F2 160.17 102.72 339600 331120 311800 358280 332790 395510 381700 376770 473240 298950 324210 255340 257030 255170 352400 286860 323600 266380 314180 303230 319710 360160 345730 396710 384700 384150 470300 305360 336430 261520 269300 264750 354700 286870 309500 253430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 447000000 20149 1416 18852 38221;38222 30642;30643 30643 2 9606 Homo sapiens 0.04624624337179739 NQQPVLPAGLQVPK Unmodified 1487.846 0.84601255 3784 Q01780-2;Q01780;B4DKG8;Q59G73;B4DFE4 EXOSC10 Exosome component 10 yes no 0 0 0 2.5 0.5 1 1 55.586 55.617 3 0.0014116 16854 20230619_1881_Aki_TMTPro18x_K_F2 73.927 51.453 39384 35670 42699 40886 44081 47166 43687 45718 56179 44273 38719 39522 47134 39019 43764 40027 44037 45829 36467 32691 43105 40963 45666 47196 44462 46755 55824 44707 40926 40307 47677 40343 44554 40548 42144 43460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203170000 20150 3784 18853 38223;38224 30644 30644 1 9606 Homo sapiens 0.1216033802286347 NQSFCPTVNLDK Unmodified 1421.6609 0.66091389 3592 Q6NZ52;P46776;E9PJD9;Q9BQQ5;E9PLL6 RPL27A;L27a 60S ribosomal protein L27a yes no 0 0 0 7.5 0.5 1 1 51.327 51.405 2 7.4903E-10 14225 20230619_1887_Aki_TMTPro18x_K_F7 218.75 148.65 92994 99516 99175 101040 106960 105140 121550 101230 124820 107970 117040 92645 103170 88326 123930 92829 97373 88348 86202 91061 100360 102040 110720 106020 121760 103930 126590 108340 119740 94657 106690 91501 124020 93082 93360 83994 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 48463000 20151 3592 18854 38225;38226 30645;30646;30647 30646 3 9606 Homo sapiens -0.0330501283904141 NQSPVLEPVGR Unmodified 1194.6357 0.63568542 1408 B1AXG1;P51812;A0A384MDW3;B7ZB17;B4DG22;B4DKZ2;A0A2R8Y603 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes no 0 0 0 5 0 1 41.186 41.272 2 0.00023293 10052 20230619_1885_Aki_TMTPro18x_K_F5 126.39 95.669 64166 44351 56920 55714 52890 66820 59440 61083 73460 73537 79168 75389 78395 67763 70723 82227 91753 74729 59220 40727 58363 55484 55539 66571 60010 63118 74271 73717 80889 76215 79699 70898 73267 81953 87467 71120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38565000 20152 1408 18855 38227 30648 30648 1 9606 Homo sapiens 0.04615300420687163 NQSQGYNQWQQGQFWGQK Unmodified 2210.9882 0.98821312 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 2.5 0.5 2 2 55.764 55.795 3;4 1.4619E-38 16655 20230619_1882_Aki_TMTPro18x_K_F3 251.28 250.29 207080 175260 188110 202880 171540 238320 220300 235660 246630 284670 238600 261160 296520 270640 222330 288200 274320 265450 191380 160680 192580 203120 181240 238140 220160 242130 249760 284320 247810 266380 297440 279700 230610 287910 261900 252400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2970299999.9999995 20153 3776 18856 38228;38229;38230;38231 30649;30650 30650 2 9606 Homo sapiens -0.06884145763569904 NQTAEKEEFEHQQK Unmodified 1744.8016 0.80164113 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96BE0;E9PS65;Q96H53;E9PM13;Q9NZ87;Q9NWW3 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 0 1 3 1.22 1 2 2 2 1 37.957 38.008 3;4 1.477E-08 8729 20230619_1883_Aki_TMTPro18x_K_F4 153.09 128.55 749590 638230 695240 666840 876120 761290 834540 818580 795440 936150 1005500 613040 776890 559320 854730 534880 540790 269670 692890 584570 713080 672900 892820 764850 842870 835070 821450 929540 1009300 635750 802440 577770 848610 524450 518580 259940 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 11228000000 20154 3430 18857 38232;38233;38234;38235;38236;38237;38238;38239 30651;30652;30653;30654 30654 4 9606 Homo sapiens -0.040967626519204714 NQTNLPTENVDK Unmodified 1371.663 0.66302238 4736 Q9Y4C2-2;Q9Y4C2;B4DST7;B7Z246 TCAF1 TRPM8 channel-associated factor 1 yes no 0 0 0 4 0 1 42.888 42.932 3 0.0012754 10805 20230619_1883_Aki_TMTPro18x_K_F4 94.747 78.856 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20155 4736 18858 38240 30655 30655 1 9606 Homo sapiens -0.007942608295934406 NQTPAPSAAQTSAPSK Unmodified 1554.7638 0.76379906 4644 Q9P265 DIP2B Disco-interacting protein 2 homolog B yes yes 0 0 0 7 0 1 37.532 37.597 3 0.017173 8280 20230619_1887_Aki_TMTPro18x_K_F7 56.746 44.119 19152 14786 24671 26436 32610 41227 28934 33483 35703 26553 33367 38430 33873 35283 33777 28835 38921 36344 17746 13630 24741 25905 33181 40348 29605 34537 35866 27592 34406 38350 34600 36130 34601 29526 37172 34450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 24084000 20156 4644 18859 38241 30656;30657 30657 2 9606 Homo sapiens 0.008607711532704343 NQTQLNTTWLR Unmodified 1373.7052 0.70516197 2443 B3KY42;Q96PZ0;Q96PZ0-2;B3KRB2 PUS7 Pseudouridylate synthase 7 homolog yes no 0 0 0 3 0 1 49.855 49.93 2 4.289E-11 14090 20230619_1882_Aki_TMTPro18x_K_F3 163.84 131.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20157 2443 18860 38242 30658 30658 1 9606 Homo sapiens 0.033257593694543175 NQTQVLR Unmodified 857.47191 0.47191456 4333 Q96CS3 FAF2 FAS-associated factor 2 yes yes 0 0 0 6 0.816 1 1 1 31.947 32.01 2 0.00072526 6099 20230619_1887_Aki_TMTPro18x_K_F7 179.97 68.693 67756 32567 75789 75460 100840 101350 79386 93312 104600 68190 105650 120920 88568 96352 109000 46087 116690 104440 62552 30221 76674 72941 102130 100260 82116 95183 105010 71921 107740 119390 92049 97494 110540 50619 111490 98624 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65424000 20158 4333 18861 38243;38244;38245 30659;30660;30661 30661 3 9606 Homo sapiens 0.037477474404568056 NQVALNPQNTVFDAK Unmodified 1657.8424 0.84238373 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DNX1;B4E1T6 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 8 0 1 54.078 54.149 2 0.0013186 15336 20230619_1888_Aki_TMTPro18x_K_F8 109.24 86.357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20159 1031 18862 38246 30662 30662 1 9606 Homo sapiens 0.039776234583541736 NQVAMNPTNTVFDAK Oxidation (M) 1664.7828 0.78281994 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;E9PNE6;P11142-2;Q53HF2;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PPY6;E9PN25;E9PK54 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein no no 0 1 0 7.43 0.728 1 2 4 48.261 48.337 2;3 9.5441E-14 13119 20230619_1887_Aki_TMTPro18x_K_F7 182.41 165.39 191660 171920 187800 205230 194020 196730 199270 190710 235790 251190 260090 217780 251330 213450 221730 288850 243980 240660 177300 157630 191260 204430 201090 199540 201790 196910 239210 249620 265000 222690 255370 224270 227600 286160 233200 229100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 640220000 20160 3430;2926 18863 38247;38248;38249;38250;38251;38252;38253 30663;30664;30665;30666;30667 30664 1742 5 9606 Homo sapiens -0.02298015547353316 NQVAMNPTNTVFDAK Unmodified 1648.7879 0.78790532 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;E9PNE6;P11142-2;Q53HF2;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PPY6;E9PN25;E9PK54 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein no no 0 0 0 7.5 0.5 1 1 53.184 53.259 2;3 1.9574E-37 15046 20230619_1887_Aki_TMTPro18x_K_F7 284.32 260.64 541530 445490 507250 511130 392160 533870 488730 522170 619280 681750 598830 513590 708660 590480 538660 715070 656070 602880 500490 408430 516500 511280 420140 537740 491510 538320 623240 675420 619390 531970 711710 613230 558160 709830 626220 574000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9611300000 20161 3430;2926 18863 38254;38255 30668;30669 30668 2 9606 Homo sapiens -0.010537116847217476 NQVFEPSCLDAFPNLK Unmodified 1877.8982 0.89818405 1487 P28161;A0A384P5E9;P28161-2;F6XZQ7;Q0D2I8;E9PHN6;A8HT81;E9PGV1 GSTM2 Glutathione S-transferase Mu 2 yes no 0 0 0 7 0 1 62.411 62.447 3 9.596E-06 18915 20230619_1887_Aki_TMTPro18x_K_F7 103.77 88.372 77704 61181 74922 84524 70129 78841 76295 78877 83797 97019 96679 93994 109990 91377 107920 108500 98123 121500 71812 56208 76321 83344 73409 80144 76848 81075 85540 96967 99174 95492 111700 95296 109250 109480 94140 115180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268360000 20162 1487 18864 38256 30670 30670 1 9606 Homo sapiens -0.0056491141631340724 NQVGDENWR Unmodified 1116.4948 0.49483484 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;Q92973-3;S4R398 TNPO1 Transportin-1 yes no 0 0 0 2 0 1 37.805 37.868 2 1.5291E-05 8822 20230619_1881_Aki_TMTPro18x_K_F2 191.78 182.57 165730 137150 154280 144870 140070 154410 141150 149600 191380 185790 169450 157930 227170 178480 128220 208360 275090 224820 153170 125640 157380 145900 146770 155380 143890 154080 191380 185060 177190 162360 225400 185160 140630 209570 261440 213540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170460000 20163 629 18865 38257 30671 30671 1 9606 Homo sapiens -0.05875278232724668 NQVSQLLPEK Unmodified 1154.6295 0.62953741 4733 Q9Y3Z3;Q9Y3Z3-3;A0A2R8YCS7;A0A2R8YFV6 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes no 0 0 0 7.5 0.5 1 1 51.291 51.368 3 0.0027726 14227 20230619_1887_Aki_TMTPro18x_K_F7 68.536 49.753 42549 35101 44496 48316 43535 49982 47101 44277 53610 47619 53517 49538 55192 44988 52659 57307 63431 62291 39361 32240 45049 47713 45406 50272 47493 45739 54223 48025 54963 50086 56155 47228 54211 57651 60579 59116 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38097000 20164 4733 18866 38258;38259 30672;30673 30672 2 9606 Homo sapiens 0.05840782189170568 NQVTQLK Unmodified 829.46577 0.46576654 2973 V9GYY3;F5H2F4;P11586;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TL46;A0A8C8UXK2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 4.5 3.5 1 1 40.652 40.648 2;3 0.0033844 9730 20230619_1888_Aki_TMTPro18x_K_F8 166.61 81.254 134380 79493 165290 147000 200770 223990 156550 201650 188390 137750 239530 260170 200800 213740 228900 99974 252770 221330 124280 73403 165740 143830 204540 219980 161620 205700 191840 146420 241850 256780 207770 215890 232830 109570 241400 209040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 230060000 20165 2973 18867 38260;38261 30674;30675 30675 2 9606 Homo sapiens 0.04421229208935529 NQWIDNVEK Unmodified 1144.5513 0.55128709 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9;B4DKC9 VCL;HEL114 Vinculin yes no 0 0 0 4.5 0.5 1 1 50.937 50.99 3 8.6992E-05 14202 20230619_1885_Aki_TMTPro18x_K_F5 140.45 115.52 103250 91699 101550 111410 109960 141400 136580 118670 155080 129330 119590 123720 131810 105320 123660 130750 127460 133000 95509 84094 103540 111270 114430 140130 136650 123130 155480 130040 124950 125200 133720 110640 126140 131090 121960 126280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87218000 20166 51 18868 38262;38263 30676;30677 30677 2 9606 Homo sapiens -0.015206503960371265 NQWQLSADDLK Unmodified 1316.6361 0.63607935 160 A0A024R1T5;P09543-2;P09543;K7ERC4 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes no 0 0 0 5.5 0.5 1 1 55.357 55.427 3 0.011682 16245 20230619_1886_Aki_TMTPro18x_K_F6 56.951 42.532 38256 27884 35073 40091 38779 48011 37926 41163 53465 39803 40349 37275 40072 32199 36196 42954 45551 42149 35325 25637 35983 39564 40043 47762 38771 42478 53029 40257 41975 37807 40728 33963 37427 42925 43469 40054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161810000 20167 160 18869 38264;38265 30678 30678 1 9606 Homo sapiens -0.009573246500849564 NQYCYGSR Unmodified 1046.424 0.42397808 4156 Q7L8L6 FASTKD5 FAST kinase domain-containing protein 5 yes yes 0 0 0 7 0 1 32.335 32.427 2 0.0071512 6300 20230619_1887_Aki_TMTPro18x_K_F7 108.46 101.57 16175 5534.6 15026 16674 19994 21236 17488 17489 19965 14691 20169 18369 21056 16467 16591 10607 22564 16500 14894 5177.9 15443 15956 20307 21020 17856 18053 20188 15122 20705 18412 21243 16753 17241 11107 21490 15632 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11411000 20168 4156 18870 38266 30679 30679 1 9606 Homo sapiens -0.09737694541877318 NQYVTLHDMILK Oxidation (M) 1489.7599 0.75989966 180 V9HWJ8;A0A024R203;P61289;P61289-3;P61289-2;K9J957;Q6FHK7;B3KQ25;K7ESG5;J7FRP4 HEL-S-283;PSME3 Proteasome activator complex subunit 3 yes no 0 1 0 4.5 3.5 1 1 48.66 48.693 3 1.5165E-05 12944 20230619_1888_Aki_TMTPro18x_K_F8 124.51 93.687 202670 168640 166070 212390 219290 216570 225250 224020 266220 238300 224020 196040 238290 195620 182360 267660 213240 210490 187140 154750 172810 210900 223660 218920 227940 228720 267240 238850 232200 201120 240080 205600 188610 264370 203710 200540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 382580000 20169 180 18871 38267;38268 30680;30681 30681 116 2 9606 Homo sapiens 0.03461010125852226 NQYVTLHDMILK Unmodified 1473.765 0.76498503 180 V9HWJ8;A0A024R203;P61289;P61289-3;P61289-2;K9J957;Q6FHK7;B3KQ25;K7ESG5;J7FRP4 HEL-S-283;PSME3 Proteasome activator complex subunit 3 yes no 0 0 0 1.5 0.5 1 1 54.885 54.897 3 2.9653E-07 16570 20230619_1881_Aki_TMTPro18x_K_F2 159 124.32 966180 785960 791290 1004300 757160 952970 990950 998410 1122400 1234100 975020 917290 1201100 989990 813940 1257700 1049400 1067400 892030 721370 819370 995360 796880 968290 989530 1023100 1131400 1224900 1016400 948260 1200300 1033200 849940 1247700 1001900 1015800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 734750000 20170 180 18871 38269;38270 30682;30683 30683 2 9606 Homo sapiens 0.04705313988483795 NRAEVSQPR Unmodified 1055.5472 0.54720476 134 A0A024R1A3;P22314-2;P22314;Q5JRR9;Q5JRS0;Q5JRS2;Q5JRS1;Q5JRS3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 1 5 0 1 23.095 23.162 3 0.0020336 3817 20230619_1885_Aki_TMTPro18x_K_F5 83.862 56.533 46988 32281 65918 65186 107230 84456 72603 99067 75738 48723 96378 90740 63336 61285 89255 38285 88592 78025 43550 29827 65955 63348 106860 84283 75404 98768 77650 53189 96469 89228 66953 62963 89977 41242 84697 73726 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60061000 20171 134 18872 38271 30684 30684 1 9606 Homo sapiens 0.021653049008818925 NRDNDPNDYVEQDDILIVK Unmodified 2274.0764 0.076419005 3478 Q6FGR6;P19387;B7Z6D1 POLR2C DNA-directed RNA polymerase II subunit RPB3 yes no 0 0 1 2 0 1 55.523 55.544 3 6.6476E-06 16801 20230619_1881_Aki_TMTPro18x_K_F2 90.379 80.322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20172 3478 18873 38272 30685 30685 1 9606 Homo sapiens -0.009656147542500548 NRDSDKTDTDWR Unmodified 1507.6651 0.66514765 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;F8VP89;F8VSC7;F8W0K0 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 2 3.5 0.5 1 1 33.334 33.393 4 0.00032461 6928 20230619_1882_Aki_TMTPro18x_K_F3 99.991 76.891 119500 131500 128020 96802 148300 121860 128150 134780 124550 138790 143060 91088 114140 81842 137020 89183 119100 63979 110800 120040 129390 101200 151500 121890 130370 136800 127920 138530 144350 94421 118340 85195 137650 88280 113740 61237 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 83465000 20173 2578 18874 38273;38274 30686 30686 1 9606 Homo sapiens -0.06837832091787277 NRDYPLASK Unmodified 1062.5458 0.54580778 1454;427 P20839-6;B4DNJ7;P20839-5;P20839-7;P20839-3;P20839;P20839-2;P20839-4;Q6ZNB1;A0A024R725;C9J381;B3KRZ3;Q5H9Q6;A0A3B3IRL5;C9K0R9;Q6RUP9;A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5;B7Z1G4;Q6QE17 IMPDH1;IMPDH;DKFZp781N0678;IMPDH2 Inosine-5'-monophosphate dehydrogenase 1;Inosine-5'-monophosphate dehydrogenase;Inosine-5'-monophosphate dehydrogenase 2 no no 0 0 1 4.5 3.5 1 1 37.833 37.826 3 0.005859 9152 20230619_1880_Aki_TMTPro18x_K_F1 75.566 42.526 218370 182540 216240 198470 229100 218800 197780 198790 282110 287690 348820 357400 322160 265630 342400 339670 387170 319090 201930 167260 219840 199520 236010 219450 203980 206870 285260 288090 353660 356530 330570 280870 350250 339040 369540 303540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 125340000 20174 427;1454 18875 38275;38276 30687;30688 30687 2 9606 Homo sapiens 0.01703670812139535 NREELGFRPEYSASQLK Unmodified 2023.0123 0.012302606 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9;Q05D33;Q6PJL0 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 2 7.67 0.471 1 2 45.31 45.357 3;4 1.2582E-18 11425 20230619_1887_Aki_TMTPro18x_K_F7 188.58 116.26 765090 583030 704580 738300 698430 757970 757720 734710 759240 908520 924360 832820 890080 777500 861720 932400 913420 949670 706690 535210 720830 733140 727440 764520 760930 756920 780660 906300 938610 847310 908220 812100 880030 935270 873710 901680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3766099999.9999995 20175 261 18876 38277;38278;38279 30689;30690 30689 2 9606 Homo sapiens 0.04171694670162651 NREILDESLR Unmodified 1243.6521 0.65206377 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B4DHD2;B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 1 3.5 0.5 1 1 39.856 39.906 3 0.00075459 9568 20230619_1882_Aki_TMTPro18x_K_F3 88.441 43.082 51522 46795 55269 47652 56117 60362 58841 57504 64772 63925 67743 58013 67179 55997 61070 71123 67803 63352 47702 42842 55798 48268 58272 60037 59370 59098 65776 64090 69272 59149 68285 58630 62634 70768 64778 60270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91226000 20176 3981 18877 38280;38281 30691 30691 1 9606 Homo sapiens 0.039983815868026795 NRELEEELRK Unmodified 1314.6892 0.68917755 3273 O60271;O60271-4;O60271-2;O60271-3;O60271-5;O60271-9;B4DS36;H0YBE9 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 2 3 0 1 39.395 39.449 4 0.081365 9373 20230619_1882_Aki_TMTPro18x_K_F3 47.288 32.086 75707 53755 66555 71584 68021 77706 69333 76976 85452 81564 98362 86706 91237 73479 81287 88445 100700 84770 69876 49387 68418 70901 70644 78078 70376 78792 86622 82340 99902 87397 92851 77033 83937 88420 96047 80613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45539000 20177 3273 18878 38282 30692 30692 1 9606 Homo sapiens 0.04442053132538604 NREPLMPSPQFIK Oxidation (M) 1571.813 0.81299786 2627 B4DZ87;O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 1 1 1.5 0.5 1 1 46.201 46.24 3 0.0027018 12852 20230619_1880_Aki_TMTPro18x_K_F1 77.776 50.806 212970 180250 204610 217610 243060 229870 243920 247520 279680 224120 258330 250730 262450 206900 267910 263560 247990 264180 196910 165320 209160 216910 249190 232040 247000 251020 281870 228620 266240 251990 267850 217920 271220 264000 237580 250850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 242880000 20178 2627 18879 38283;38284 30693;30694 30693 1576 2 9606 Homo sapiens 0.0499638790854533 NREPLMPSPQFIK Unmodified 1555.8181 0.81808324 2627 B4DZ87;O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 1 2.5 0.5 1 1 51.168 51.225 3 2.1031E-06 14640 20230619_1882_Aki_TMTPro18x_K_F3 139.86 115 309980 285050 340460 358030 323140 374290 377240 366850 432630 381470 373120 394740 367370 356790 398550 376080 407810 422410 287090 261470 343200 355800 338550 377040 378940 375760 435130 385260 385640 398700 376940 370190 405110 380330 390200 400660 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 360140000 20179 2627 18879 38285;38286 30695;30696;30697 30696 3 9606 Homo sapiens 0.06240691771154161 NREPLVK Unmodified 854.4974 0.49740102 1313 H7C045;H7C122;A0A1W2PP66;C9JNP8;Q9H300-2;Q9H300 PARL Presenilins-associated rhomboid-like protein, mitochondrial;P-beta yes no 0 0 1 7.5 0.5 1 1 34.499 34.533 3 0.0087735 7141 20230619_1887_Aki_TMTPro18x_K_F7 101.28 63.046 40265 26058 41498 43995 57606 62256 48481 48272 63054 45782 74655 75192 64231 58892 66017 38772 78967 81489 37193 24020 42307 43153 58328 61219 49868 50224 63769 47339 75596 74407 65999 60251 67657 41768 75447 76937 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41338000 20180 1313 18880 38287;38288 30698 30698 1 9606 Homo sapiens 0.0643322196290228 NREPVQLETLSIR Unmodified 1553.8526 0.85255449 3718 P62314;J3QLI9;Q7Z5A3 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes no 0 0 1 7 0.816 1 1 1 46.121 46.191 3 1.2770999999999998E-28 11770 20230619_1887_Aki_TMTPro18x_K_F7 263.98 196.83 1211200 996590 1216300 1277900 1407700 1552800 1394300 1473900 1637500 1392000 1561800 1417500 1523100 1348700 1473300 1394800 1600500 1488900 1120000 914690 1238400 1271000 1447000 1547400 1414400 1508600 1650600 1412500 1603400 1436100 1553800 1395900 1505500 1406700 1529300 1413600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3728999999.9999995 20181 3718 18881 38289;38290;38291 30699;30700;30701;30702 30701 4 9606 Homo sapiens 0.09778231183622665 NRESYEVSLTQK Unmodified 1452.7209 0.72087161 593 A0A024R9U3;Q9NX40;D6RDK6;D6RBN5 OCIAD1 OCIA domain-containing protein 1 yes no 0 0 1 6.5 0.5 1 1 41.739 41.81 3 8.8696E-07 10011 20230619_1887_Aki_TMTPro18x_K_F7 145.71 97.885 44502 40080 40177 47084 54572 55733 57094 54357 61794 54287 60994 63475 57022 46110 59418 68082 69675 74300 41143 36742 41434 47087 55583 55685 57543 55630 62628 55148 62473 63455 58436 49313 60995 68374 66597 70487 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63523000 20182 593 18882 38292;38293 30703;30704 30704 2 9606 Homo sapiens 0.01262001095847154 NRETASELLMR Oxidation (M) 1334.6612 0.66124824 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 1 1 5.5 0.5 1 1 37.517 37.601 3 0.0085867 8500 20230619_1885_Aki_TMTPro18x_K_F5 71.219 55.59 32002 31899 30564 32352 41544 34932 35448 37184 41265 34789 41726 35475 41539 32442 39279 43594 43944 36658 29621 29194 31328 32692 42043 35227 36281 37761 41712 35317 42740 35930 42277 34156 40260 43231 41950 34918 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82650000 20183 2337;3778;3779 18883 38294;38295 30705 30705 1452 1 9606 Homo sapiens 0.007304068808025477 NRETHEIVALK Unmodified 1308.715 0.71499837 901 Q6IAW3;A0A090N7W4;Q00535;Q00535-2;A0A0S2Z355 CDK5 Cyclin-dependent-like kinase 5 yes no 0 0 1 6.5 0.5 1 1 37.948 38.018 4 0.0028199 8464 20230619_1887_Aki_TMTPro18x_K_F7 89.283 55.397 59447 54019 55668 55374 71275 73590 69474 70525 87871 68898 79003 67883 73726 70572 68412 85564 88600 75903 54978 49459 57095 56085 72746 72997 70708 72188 88055 69742 81160 69141 75244 73453 70865 85158 84489 72242 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168420000 20184 901 18884 38296;38297 30706 30706 1 9606 Homo sapiens 0.07298947374829368 NRETIASVR Unmodified 1044.5676 0.56760585 2909 Q53T47;E9PB93;E9PHV4;O15514 POLR2D DNA-directed RNA polymerase II subunit RPB4 yes no 0 0 1 6.5 0.5 1 1 29.106 29.176 3 0.0016416 5000 20230619_1887_Aki_TMTPro18x_K_F7 85.355 35.001 58376 47853 63693 58600 71675 70606 66727 70546 80442 75505 82649 67762 68477 64827 61743 76432 87909 73131 54020 43900 64335 58478 73620 70509 68019 72173 81246 75819 83956 69103 70091 67557 64423 76398 83756 69549 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 43254000 20185 2909 18885 38298;38299 30707;30708 30708 2 9606 Homo sapiens 0.04710475560705163 NRGPPPSWGR Unmodified 1122.5683 0.56827456 2236 B2R6F3;P84103-2;P84103 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 yes no 0 0 1 4 1.41 1 1 1 1 1 31.623 31.686 3 9.1645E-05 6264 20230619_1882_Aki_TMTPro18x_K_F3 129.39 115.77 342150 294660 372510 314780 448860 426860 422580 443240 473530 343350 354030 261850 304080 256960 356870 294070 361630 238110 316720 269930 376610 318040 458880 423750 429200 448720 474420 350070 366180 269730 314490 267190 361820 292060 345100 227200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 322260000 20186 2236 18886 38300;38301;38302;38303;38304 30709;30710;30711 30709 3 9606 Homo sapiens 0.011893150004198105 NRLEEVSPNLVR Unmodified 1424.7736 0.77357588 1339 E5KRK5;A0A291FIZ5;P28331-4;P28331;P28331-2;P28331-5;B4DJ81;P28331-3;Q9P1A0 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 1 7 0 1 41.816 41.887 3 0.014639 10010 20230619_1887_Aki_TMTPro18x_K_F7 66.533 42.443 76419 69002 80648 79728 106230 114370 101730 100790 114850 85192 94708 87642 95879 87021 84482 93764 91616 83022 70740 63245 81959 80103 108170 112720 103220 103460 115380 87086 98118 88901 97323 90098 86550 93508 87529 79000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104920000 20187 1339 18887 38305 30712 30712 1 9606 Homo sapiens 0.07818003949319063 NRLENDGATALAEAFR Unmodified 1746.8649 0.86491009 162 A0A024R1U0;P46060 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 1 5 0 1 52.714 52.786 3 0.00038049 15022 20230619_1885_Aki_TMTPro18x_K_F5 86.8 71.598 42052 34554 41895 45140 40914 45947 49933 47430 58016 50134 52490 50765 56146 49181 52920 61900 58920 54616 38884 31720 42582 44726 42828 46429 50065 48435 58401 50562 54269 51487 57053 51438 54249 61569 56287 51967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172340000 20188 162 18888 38306 30713 30713 1 9606 Homo sapiens 0.021352228560090225 NRLPIATR Unmodified 939.5614 0.56139826 495 Q14C86-6;Q14C86;Q14C86-2;Q14C86-5;Q14C86-4;A0A024R8A2;A0A024R862;F8W9S7;Q14C86-3;A0A024R875;B4DK42;C9IZ08;B4DGD8;H0Y7I9 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 0 0 1 4.5 0.5 1 1 33.471 33.541 3 0.012888 6997 20230619_1885_Aki_TMTPro18x_K_F5 76.827 38.534 70567 54736 64684 66341 73122 75665 70817 74823 90830 64415 74040 66260 66917 68195 65317 80146 81717 72621 65185 50221 66324 66180 75231 75800 72162 76206 90636 65777 76388 67328 68553 70849 67432 79890 77965 69089 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40701000 20189 495 18889 38307;38308 30714 30714 1 9606 Homo sapiens 0.08920002119850778 NRPAPYSRPK Unmodified 1184.6414 0.6414395 4189 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 0 2 5.5 0.5 1 1 28.602 28.655 4 0.0012394 5207 20230619_1885_Aki_TMTPro18x_K_F5 96.113 73.094 209210 387840 237510 173480 212460 245050 204750 284550 202740 185810 200090 149430 258730 167480 229550 320160 336700 282950 195200 352810 238130 194710 222430 243920 207210 284920 206610 191890 207680 154650 260620 180480 240320 316830 320750 269330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158630000 20190 4189 18890 38309;38310 30715;30716 30715 2 9606 Homo sapiens 0.056504437230159965 NRPDYVSEEEEDDEDFETAVK Unmodified 2515.0511 0.051051695 3613 P49792;A0A8V8TLN4;A0A8V8TMN6;A0A8V8TLA0;A0A8V8TL79;A0A8V8TMX6 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 1 1 0 1 50.589 50.589 3 9.419899999999999E-32 14602 20230619_1880_Aki_TMTPro18x_K_F1 218.42 210.61 35757 34712 30127 39324 32777 42724 38322 35877 44287 48045 45973 42196 51963 49473 48140 61448 54626 54210 33059 31803 31178 39368 34056 42784 38494 37460 44877 47746 47330 43390 52706 51399 49451 61114 52200 51567 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44124000 20191 3613 18891 38311 30717 30717 1 9606 Homo sapiens -0.14587178857937033 NRPEAFPTAEDIFAK Unmodified 1704.8471 0.84713476 929 A0A8I5QJK7;A0A8I5KVA6;A0A8I5KSA4;A0A8I5KXK9;A0A8I5KQY2;B4DYQ3;Q7Z3Z5;A0A0A0MR79;A0A8I5QJW8;A0A8I5KW86;A0A8I5KUR0;Q93074-3;Q93074;Q93074-2 TNRC11;MED12 Mediator of RNA polymerase II transcription subunit 12 yes no 0 0 1 7 0 1 55.684 55.745 3 7.2926E-14 16029 20230619_1887_Aki_TMTPro18x_K_F7 176.23 135.86 32283 33404 32613 33181 30231 31323 36254 35493 43534 36897 37938 32268 43359 32016 37336 47047 36823 35812 29903 30564 33069 33535 31741 31938 36430 36012 43698 37087 39384 33011 43760 33838 38098 46379 35230 34137 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25840000 20192 929 18892 38312 30718 30718 1 9606 Homo sapiens 0.022905076011056735 NRPEDYQGGR Unmodified 1190.5428 0.54284767 1478 A0A384NPU5;Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 1 2.5 1.12 1 1 1 1 23.985 24.058 3 8.9318E-06 3802 20230619_1882_Aki_TMTPro18x_K_F3 138.22 116.76 647010 386880 851500 732050 1105200 1212000 811300 1116800 1085500 793310 1338200 1432500 1074800 1056300 1227700 492340 1394500 1216700 598830 357350 850920 716860 1120000 1186100 844790 1137800 1098700 838670 1350400 1411200 1113500 1072100 1250600 547020 1331400 1148600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1431900000 20193 1478 18893 38313;38314;38315;38316 30719;30720;30721 30720 3 9606 Homo sapiens -0.044802043126765057 NRPETVVSR Unmodified 1056.5676 0.56760585 616 A0A024RAC0 LUZP1 yes yes 0 0 1 6 0 1 27.514 27.548 3 0.0051011 4913 20230619_1886_Aki_TMTPro18x_K_F6 79.148 48.578 40808 34769 34359 33761 29927 33429 33498 31453 44877 31616 42994 42716 38986 32153 30931 31008 39573 30252 37694 31827 35365 34204 31573 33808 33927 32296 44929 32306 44005 42494 39531 33445 32068 31148 37715 28776 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11531000 20194 616 18894 38317 30722;30723 30722 2 9606 Homo sapiens 0.04158475560689112 NRPGSALEK Unmodified 970.51959 0.51959303 3533 P31930 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 0 0 1 7.5 0.5 1 1 33.299 33.341 3 0.0015343 6821 20230619_1888_Aki_TMTPro18x_K_F8 96.009 71.627 280390 176630 309380 343050 468690 466690 441470 459400 553410 296300 431710 402030 400260 342390 360890 202700 436430 370660 259110 163170 314480 334070 473150 462110 449940 465340 551550 311860 447030 401250 407720 347960 370900 215940 416380 350510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 420370000 20195 3533 18895 38318;38319 30724;30725 30725 2 9606 Homo sapiens 0.03315401640657001 NRPLSDEELDAMFPEGYK Oxidation (M) 2125.9626 0.9626348 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 1 1 4 0 1 52.344 52.368 3 1.8031E-06 15091 20230619_1883_Aki_TMTPro18x_K_F4 110.37 94.6 26415 22569 25858 32529 25893 29479 33155 30307 31318 32027 34906 34530 34288 31479 32317 40229 33728 37333 24427 20738 26360 31975 27081 30049 32948 30971 32150 32348 35621 34857 34935 33018 33021 40101 32282 35477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54646000 20196 3309 18896 38320 30726 30726 1938 1 9606 Homo sapiens -0.05530801120812612 NRPMQQEDEYR Unmodified 1464.6416 0.64157543 4329 Q96BY7 ATG2B Autophagy-related protein 2 homolog B yes yes 0 0 1 2 0 1 29.677 29.746 3 0.00036672 5654 20230619_1881_Aki_TMTPro18x_K_F2 105.2 81.828 6911.4 8239.7 8601.1 6598.9 11391 11777 9990 10224 10349 10073 10929 12051 12430 12304 9472.9 11785 14981 11063 6421.9 7524.2 8626.3 6878.9 11561 11490 10167 10541 10551 10252 11257 12151 12515 12645 9999.1 11807 14253 10530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10031000 20197 4329 18897 38321 30727 30727 1 9606 Homo sapiens -0.07215969129924815 NRPPFGQGYTQPGPGYR Unmodified 1890.9125 0.91252898 1631 Q92734;Q92734-2;A0A6Q8PFY7;Q7Z426;Q7Z427 TFG Protein TFG yes no 0 0 1 4.5 0.5 1 1 40.662 40.727 3 1.0009E-13 9809 20230619_1885_Aki_TMTPro18x_K_F5 163.2 152.72 207480 181260 215750 211400 203770 245010 227840 228090 257000 289530 235110 226430 294290 235890 242520 320490 296570 260030 192000 166170 218290 211510 213400 244810 229290 235750 259640 287400 244770 233140 295990 247530 250920 317090 282980 247760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 639370000 20198 1631 18898 38322;38323 30728;30729 30728 2 9606 Homo sapiens 0.0027092184684534004 NRPPLPAGTNSK Unmodified 1250.6731 0.67313356 3578;668;675 A0A024RBE7;P42167;G5E972;P42167-3;A0A024RBH7;P42167-2;Q59G12;P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 0 0 1 3.25 0.829 1 1 2 35.903 35.957 3 3.9874E-08 7916 20230619_1883_Aki_TMTPro18x_K_F4 152.31 120.46 190410 139540 152910 165820 199620 218610 201670 201840 276680 209870 240600 217910 237960 209100 205190 222120 260760 206970 175670 128030 159240 166000 203920 216670 205450 207510 275940 212110 248230 220660 241510 216610 212370 222150 248580 196940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1281000000 20199 668;675;3578 18899 38324;38325;38326;38327 30730;30731;30732 30732 3 9606 Homo sapiens 0.057823916863071645 NRPSSGSLIQVVTTEGR Unmodified 1799.949 0.94897407 1243 A0A140VKA9;P09417;P09417-2 QDPR Dihydropteridine reductase yes no 0 0 1 1.5 0.5 1 1 45.843 45.883 3 3.3084999999999997E-38 12483 20230619_1881_Aki_TMTPro18x_K_F2 253.26 222.82 197860 152800 175200 226320 179070 190960 191730 199070 213890 250390 242400 240710 257350 233020 224020 268420 262080 258600 182720 140510 180200 221910 186060 195940 193350 204240 218010 249950 247990 244540 260710 242430 230730 268510 250360 245740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1340300000 20200 1243 18900 38328;38329 30733;30734 30734 2 9606 Homo sapiens 0.08099753952865285 NRPTSISWDGLDSGK Unmodified 1631.7903 0.79034816 2861 D9IAI1;P30086;A0A0K0K1J6;B4DRT4 HEL-S-34;PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 1 7.67 0.471 1 2 48.81 48.883 3;4 1.9131E-07 13052 20230619_1887_Aki_TMTPro18x_K_F7 124.04 75.3 573530 488240 508500 539790 527750 731360 558780 599410 827880 656950 707930 712670 685470 682110 703710 731440 763230 816540 529970 447420 522600 543450 549370 721710 569940 622790 822780 663170 731050 719980 701980 706900 718720 738970 730040 774450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5450000000 20201 2861 18901 38330;38331;38332 30735;30736 30735 2 9606 Homo sapiens -0.00027539955408428796 NRQEYEDIAVK Unmodified 1363.6732 0.67319314 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2;O15294-4 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 1 4 0 1 41.48 41.523 3 0.023091 10204 20230619_1883_Aki_TMTPro18x_K_F4 62.891 35.753 198160 164840 174210 191270 223900 212250 218610 209060 233870 226210 269170 247730 245940 209920 223230 283730 259920 240930 183070 151140 179780 191300 228260 213090 221190 214280 238750 228350 273330 249450 250690 221590 229760 281380 248200 229360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195600000 20202 1842 18902 38333 30737 30737 1 9606 Homo sapiens 0.005903468956603319 NRTPSDVK Unmodified 915.47739 0.47739386 1493 A0A384P5U2;P39687;H0YN26;Q6PKH8;Q08AJ6;Q3KPI8;Q1AHP8;H7BZ09;O95626 ANP32A;ANP32D Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member D yes no 0 0 1 6.5 0.5 1 1 29.772 29.841 3 0.060946 5257 20230619_1887_Aki_TMTPro18x_K_F7 55.567 11.432 43232 17360 62039 51525 110000 68368 70547 100600 59209 39026 79316 74638 48102 52094 67732 26289 70905 58142 39992 16215 62043 49445 108890 68637 73174 98787 61661 43755 79072 73410 51079 53081 68466 28765 67723 54933 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28061000 20203 1493 18903 38334;38335 30738;30739 30739 2 9606 Homo sapiens 0.016274262322781397 NRVPSAGDVEK Unmodified 1170.5993 0.59929991 3941 Q15785;B4DXU3 TOMM34 Mitochondrial import receptor subunit TOM34 yes no 0 0 1 5 0 1 36.377 36.469 3 0.08612 8114 20230619_1885_Aki_TMTPro18x_K_F5 37.946 0.8348 57550 43580 54861 52301 72216 68727 63539 69426 85466 75297 94765 77070 78801 66988 76560 62540 82953 58979 53169 39985 56183 52339 73363 68297 65264 70989 86138 75855 95957 77846 80814 69190 78156 62789 79141 56145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108830000 20204 3941 18904 38336 30740 30740 1 9606 Homo sapiens 0.020824235239842892 NRVPYVK Unmodified 874.50249 0.5024864 2727;1036 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;Q6P164;Q66K46;Q2TA90;O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;A0A7I2V581;A0A7I2V3V4;Q6PKD1;Q6PJC4;Q57YV5 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12;KIF5C Kinesin-1 heavy chain;Kinesin-like protein;Kinesin heavy chain isoform 5C no no 0 0 1 3 0 1 37.498 37.551 3 0.01861 8624 20230619_1882_Aki_TMTPro18x_K_F3 86.866 42.731 55292 49957 55904 58945 67443 53207 64338 74361 72285 63126 78301 66409 72622 55205 66967 65978 78713 67301 51165 45798 56903 58754 68888 54786 65333 74175 73387 64474 79719 66952 73989 57917 68833 66212 75119 63951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22616000 20205 2727;1036 18905 38337 30741 30741 1 9606 Homo sapiens 0.06021525825519802 NRWDETPK Unmodified 1044.4989 0.49885759 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 1 5.5 0.5 1 1 37.19 37.282 3 0.0074356 8419 20230619_1885_Aki_TMTPro18x_K_F5 89.542 58.855 140730 126480 129850 109680 123740 160590 145930 143490 168380 155810 167950 157390 163300 148450 146260 181590 223360 174300 130130 115660 132630 112970 129850 158170 146570 148040 170200 156910 172050 159500 166170 155130 153460 181440 212630 165810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141710000 20206 3309 18906 38338;38339 30742;30743 30742 2 9606 Homo sapiens -0.021611887390236006 NSAFESLYQDK Unmodified 1300.5935 0.59354583 3312 O75643;A4FU77;A0A494C1A5 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 6 0 1 54.374 54.451 3 0.0026193 15800 20230619_1886_Aki_TMTPro18x_K_F6 75.088 49.746 162360 144470 195850 194150 219570 275050 232940 221370 329290 459210 746990 971550 513610 620420 718340 488330 648180 787860 150470 132620 196580 192990 226880 270680 237320 236440 346340 466520 738310 949770 542240 643680 721770 510480 621820 744620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161780000 20207 3312 18907 38340 30744 30744 1 9606 Homo sapiens -0.04472719778368628 NSALSAQLR Unmodified 958.51959 0.51959303 2024 Q53HS0;A8K3A8;P47897-2;P47897;B4DNN3;C9J165;A0A0U1RQT0;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;F2Z2V6;A0A0U1RQE9;B7Z840;A0A0U1RQC3;I3QNU8 QARS Glutamine--tRNA ligase yes no 0 0 0 8 0 1 38.91 38.897 2 0.0002957 9028 20230619_1888_Aki_TMTPro18x_K_F8 140.88 78.917 45836 40374 36635 28127 52806 70195 47744 49890 90356 14339 13411 14274 13983 14462 26023 13815 19676 14938 42333 36870 38189 30015 53644 67318 49669 51371 86321 16578 17424 14527 14881 14869 25829 13998 18855 14194 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24372000 20208 2024 18908 38341 30745 30745 1 9606 Homo sapiens 0.038674016406730516 NSAQGNVYVK Unmodified 1078.5407 0.5407224 1482 Q14498;Q14498-2;B4E1M7;A0A384NQ03;Q68DD9;B3KWX7;B4DLM0;Q6N037;B4DRA0;E1P5S2;Q6MZY7;B7Z4L7;Q14498-3;Q7Z3L0;H0Y4X3 RBM39;DKFZp781C0423;DKFZp686A11192;RNPC2;DKFZp686C17209;DKFZp781I1140 RNA-binding protein 39 yes no 0 0 0 8 0 1 39.679 39.668 2 1.2211E-06 9327 20230619_1888_Aki_TMTPro18x_K_F8 196.37 124.33 61647 29720 72445 80369 102070 142350 87072 102960 102200 70881 116520 119340 108590 108540 99231 49361 134910 117950 56940 27665 73228 77655 103500 138120 89178 106980 103670 74916 118540 118510 110760 109190 102740 54582 128620 111370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43323000 20209 1482 18909 38342 30746 30746 1 9606 Homo sapiens 0.004593669495079666 NSATSADEQPHIGNYR Unmodified 1758.7921 0.79213907 320 Q7KZI7;Q7KZI7-7;A0A024R555;A0A7I2V3R3;A0A7I2YQR3;A0A140VJP1;A0A0A0MRU9;A8K2S4;E7ETY4;E9PC69;A9CP04;A0A024R5B2;Q7KZI7-8;Q7KZI7-13;Q7KZI7-12;Q7KZI7-2;Q7KZI7-9;Q7KZI7-11;Q7KZI7-6;Q7KZI7-15;Q7KZI7-14;Q7KZI7-10;Q7KZI7-3;Q7KZI7-4;Q7KZI7-16;Q7KZI7-5;F5H4F6;F5H4J8;F5H6N2 MARK2;Par1b Serine/threonine-protein kinase MARK2 yes no 0 0 0 3 0 1 35.252 35.309 3 1.1297E-42 7687 20230619_1882_Aki_TMTPro18x_K_F3 276.75 268.62 21220 17184 24073 27388 25044 27132 21827 26882 27534 28988 29222 27585 32088 27406 32331 27794 35320 29243 19642 15812 24246 26800 25848 27438 22397 27525 27816 29139 30022 28062 32672 28302 33007 28025 33723 27782 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73105000 20210 320 18910 38343 30747 30747 1 9606 Homo sapiens -0.05690530937431504 NSCITCPQCHR Unmodified 1431.5806 0.58057186 1727 A0A804HIL7;Q9C026;Q9C026-4;Q9C026-5 TRIM9 E3 ubiquitin-protein ligase TRIM9 yes no 0 0 0 7.5 0.5 1 1 29.297 29.318 3 0.00026737 5408 20230619_1888_Aki_TMTPro18x_K_F8 105.46 96.506 5081.3 2083.3 4455.3 4403.5 6203.8 4431.7 4286.2 4468.1 3516.6 7078.4 7050.1 4445.5 5217.8 4205.8 5783.3 5752 6134.6 6576.8 4679.1 1906.7 4599.4 4253.7 6234.5 4483.6 4414.9 4629.4 3782.7 6926.2 6970.2 4630.4 5407 4434 5890.6 5800.7 5869.2 6236.3 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5179200 20211 1727 18911 38344;38345 30748;30749;30750 30749 3 9606 Homo sapiens -0.1179552070536829 NSCNVGGGGGGFK Unmodified 1209.5197 0.51966938 2077 A8K5Q1;Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes no 0 0 0 8 0 1 39.825 39.815 3 1.3702E-05 9400 20230619_1888_Aki_TMTPro18x_K_F8 105.99 94.772 56064 38175 61326 65461 79672 76627 73255 77169 80102 62744 65513 67705 72617 64356 66439 51130 78565 68037 51827 35188 62149 63973 81026 76631 74447 78397 80613 64363 68237 68359 73626 65813 68241 52604 74980 64481 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36124000 20212 2077 18912 38346 30751 30751 1 9606 Homo sapiens -0.07670966421642333 NSDDTVTWDEYNIQMYDR Unmodified 2263.9328 0.93279124 3884 Q14257;Q14257-2;H0YL43 RCN2 Reticulocalbin-2 yes no 0 0 0 2.5 0.5 1 1 59.852 59.873 3 4.1566E-10 18561 20230619_1881_Aki_TMTPro18x_K_F2 141.53 137.26 65567 55715 59148 73141 55844 62553 63494 69725 80601 73369 84720 80371 86939 76835 79906 86353 82328 91977 60593 51143 60651 72280 58522 64217 64136 70844 81272 74179 86791 81196 88338 79872 81551 86925 78814 87265 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28393000 20213 3884 18913 38347;38348 30752;30753 30752 2 9606 Homo sapiens -0.14861784856748272 NSDEADLVPAK Unmodified 1157.5564 0.55643205 3135 J3KS05;Q6IBN6;P83916;B5MD17 CBX1 Chromobox protein homolog 1 yes no 0 0 0 2.5 0.957 1 2 2 1 46.04 46.099 2;3 5.3373E-06 12629 20230619_1881_Aki_TMTPro18x_K_F2 157.97 112.25 291090 236970 278990 298580 295560 343850 293950 290580 441250 377520 426680 391120 404850 354680 354330 428040 420160 397070 269060 217460 284780 297010 306100 343020 301030 302880 440340 377550 437130 395390 411620 370840 365240 427050 401210 377550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 876000000 20214 3135 18914 38349;38350;38351;38352;38353;38354 30754;30755 30754 2 9606 Homo sapiens -0.01604391324099197 NSEPAGLETPEAK Unmodified 1341.6412 0.64122431 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 2.5 0.5 1 1 43.338 43.407 3 0.0012634 11164 20230619_1882_Aki_TMTPro18x_K_F3 81.904 58.986 56587 45718 55018 55789 71177 79582 68352 78244 87315 67473 85506 82230 82613 81721 80154 84501 90173 91910 52309 41942 56273 55835 72617 78623 69682 79683 87722 69262 87666 82848 84378 84410 82127 85284 86192 87212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111460000 20215 3402 18915 38355;38356 30756;30757 30757 2 9606 Homo sapiens -0.015930655781630776 NSEPEEVIPSR Unmodified 1255.6044 0.60444487 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 0 1.5 0.5 1 1 39.962 39.962 2 7.8308E-12 10033 20230619_1880_Aki_TMTPro18x_K_F1 218.07 166.64 88389 74814 70033 80437 76667 77976 82883 80427 102360 98104 115430 132310 113260 103070 117040 118410 126360 126850 81608 68543 72821 80769 79300 79150 83814 82507 103670 99235 117850 131720 115890 108040 119470 119220 120810 120390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149160000 20216 1102 18916 38357;38358 30758;30759 30758 2 9606 Homo sapiens -0.013133174040376616 NSEPQDEGELFQGVDPR Unmodified 1915.8548 0.85479891 3237 O15240;Q05BJ3 VGF Neurosecretory protein VGF;Neuroendocrine regulatory peptide-1;Neuroendocrine regulatory peptide-2;Antimicrobial peptide VGF[554-577] yes no 0 0 0 1 0 1 51.572 51.572 3 0.00029809 15066 20230619_1880_Aki_TMTPro18x_K_F1 78.661 60.961 14647 13227 14029 13872 13568 17576 15790 17694 19290 17363 20882 16934 18845 17742 17460 22720 18152 21281 13547 12113 14298 14015 14216 17491 15908 18048 19502 17558 21231 17269 19243 18529 17848 22655 17382 20216 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26319000 20217 3237 18917 38359 30760 30760 1 9606 Homo sapiens -0.06649429659933048 NSETFPTILEEAK Unmodified 1477.73 0.73003931 1901 A0RZB8;Q6URC4;O60610-2;O60610-3;O60610;Q7KZJ7;Q96IL1;B4DVR3;H7C2W8 DIAPH1 Protein diaphanous homolog 1 yes no 0 0 0 3.67 0.471 1 2 59.883 59.899 2;3 6.6152E-05 18288 20230619_1883_Aki_TMTPro18x_K_F4 108.58 92.355 83696 74733 81227 83120 68668 84867 83246 85437 97628 111920 105310 99165 116530 95321 107020 114200 109350 124730 77417 68476 82549 83314 72804 85706 83576 87937 99038 111280 108140 101130 118090 99511 109170 115020 104710 118310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 194510000 20218 1901 18918 38360;38361;38362 30761;30762;30763 30762 3 9606 Homo sapiens 0.010283496615329568 NSFDCFKK Unmodified 1044.4699 0.46986564 4002;2357 Q53GR7;Q9UJS0;Q9UJS0-2;B7Z2E2;B3KMV8;O75746-2;O75746 SLC25A13;SLC25A12 Calcium-binding mitochondrial carrier protein Aralar2;Calcium-binding mitochondrial carrier protein Aralar1 no no 0 0 1 1.5 0.5 1 1 46.007 46.047 3 0.059013 12601 20230619_1881_Aki_TMTPro18x_K_F2 52.579 32.024 200640 224960 238740 209370 257960 250000 261220 243950 247090 260100 243660 185960 276050 190600 230210 211480 195550 129630 186250 205680 239430 213510 266030 249850 262800 250030 252610 259730 251190 192420 278140 197700 232850 207750 186980 124230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167210000 20219 4002;2357 18919 38363;38364 30764 30764 1 9606 Homo sapiens -0.05059049359647361 NSFYMGTCQDEPEQLDDWNR Unmodified 2504.0009 0.0008875756 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 3 0 1 58.971 59 3 7.905E-45 18003 20230619_1882_Aki_TMTPro18x_K_F3 239.43 235.63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20220 349;3906 18920 38365 30765 30765 1 9606 Homo sapiens -0.19095283268507046 NSGELEATSAFLASGQR Unmodified 1736.8329 0.83294126 4628 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes yes 0 0 0 6 0 1 53.974 54.051 3 0.0001595 15675 20230619_1886_Aki_TMTPro18x_K_F6 87.323 67.608 47844 44945 45799 44040 44097 52686 48357 50495 58690 46198 44048 41414 46942 39897 52320 41416 49769 47892 44265 41131 46661 44702 46104 52585 48836 51607 58596 46802 46012 42210 48076 41306 52903 41996 47630 45426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69043000 20221 4628 18921 38366 30766 30766 1 9606 Homo sapiens -0.006001896178077004 NSGPLGTEMNTGFSSEVK Oxidation (M) 1869.8415 0.84145703 1230 Q9UQ35;A0A140VK53;O60382;Q9UQ35-2 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 1 0 5 0 1 49.637 49.713 3 7.6204E-11 13647 20230619_1885_Aki_TMTPro18x_K_F5 144.68 126.88 30766 24274 27689 31551 34788 41770 28589 36079 45399 34844 42939 42547 47842 38634 35912 45240 48807 52656 28419 22286 28512 31387 35477 41316 29723 37194 45169 35543 44360 42736 48104 40348 37490 45740 46600 49920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42408000 20222 1230 18922 38367 30767 30767 772 1 9606 Homo sapiens -0.058670037635010885 NSGQNLEEDMGQSEQK Oxidation (M) 1808.7483 0.74828493 4543 Q9HAV7 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 0 1 0 1.5 0.5 1 1 37.152 37.182 3 1.9965E-11 8837 20230619_1880_Aki_TMTPro18x_K_F1 160.03 144.26 34184 28620 34131 29693 37041 41699 32149 39704 45727 40583 60344 49790 44325 44261 47110 48631 57421 49967 31613 26214 34688 30083 38147 41218 33160 40688 46339 41258 60445 49998 45926 46033 48431 48877 54788 47472 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84347000 20223 4543 18923 38368;38369 30768 30768 2809 1 9606 Homo sapiens -0.1237392821674348 NSGQNLEEDMGQSEQK Unmodified 1792.7534 0.75337031 4543 Q9HAV7 GRPEL1 GrpE protein homolog 1, mitochondrial yes yes 0 0 0 1.5 0.5 1 1 43.991 44.032 3 4.3041E-11 11715 20230619_1881_Aki_TMTPro18x_K_F2 153.48 137.71 63924 51273 53685 51976 72210 63965 62862 64411 81386 67590 89141 86558 76664 75465 69380 85027 95916 91434 59023 46961 55631 52634 73222 63852 64503 65846 82101 68744 90510 86676 78389 78661 72228 85607 91485 86793 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285680000 20224 4543 18923 38370;38371 30769 30769 1 9606 Homo sapiens -0.11129624354111911 NSGSGVAGGGSGGGGSYWK Unmodified 1640.7179 0.7179115 2924 E9PJP2;Q5TF21;A0A994J4H7 SOGA3 Protein SOGA3 yes no 0 0 0 1 0 1 44.939 44.939 3 2.0266E-14 12285 20230619_1880_Aki_TMTPro18x_K_F1 151.64 141 26247 22663 28281 26880 29773 34148 30593 31622 33997 32750 43429 43401 43986 38073 38193 39600 49216 49853 24294 20781 28575 26903 30835 33919 30921 32506 34801 33365 44134 43406 44608 39536 39553 40340 46987 47240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31734000 20225 2924 18924 38372 30770 30770 1 9606 Homo sapiens -0.07681874028912716 NSHAEFLDIMK Unmodified 1303.6231 0.62307182 2876 G5EA19;U3KQS5;E5RG17;Q6P1N9;H0YBX2;E5RGF2;A0A0D9SGD3;Q6P1N9-2 TATDN1 Putative deoxyribonuclease TATDN1 yes no 0 0 0 6.5 0.5 1 1 52.091 52.166 3 7.3201E-05 14846 20230619_1886_Aki_TMTPro18x_K_F6 124.12 92.933 140310 51661 119480 121260 120420 125720 120190 117180 150310 159800 153290 143180 173380 150310 134730 169940 144140 169780 129140 48045 123100 116680 125050 126500 122170 121440 151660 158750 157900 146380 174480 155870 138400 170350 138000 161170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181740000 20226 2876 18925 38373;38374 30771 30771 1 9606 Homo sapiens -0.016594790338558596 NSHAPPAETIR Unmodified 1191.5996 0.59963426 616 A0A024RAC0;Q86V48-2;Q86V48-3;Q86V48 LUZP1 Leucine zipper protein 1 yes no 0 0 0 4 0 1 23.179 23.245 3 0.028045 3857 20230619_1883_Aki_TMTPro18x_K_F4 55.261 42.645 15095 7793.9 13785 15527 22344 20558 15528 19476 20205 15388 21914 23448 19423 17162 17294 11852 23367 20092 13916 7210.5 14244 15095 22329 20376 16207 19851 20369 16019 22300 23208 19808 17633 17925 12478 22276 19009 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11898000 20227 616 18926 38375 30772 30772 1 9606 Homo sapiens 0.011498432438429518 NSIDYIYNTR Unmodified 1257.599 0.59896556 1604 A0A6I8PRJ0;A0A6I8PLG0;A0A6I8PRQ0;A0A6I8PUE4;H0Y5C0;B1ALU1;A0A8I5KUX3;A0A6I8PIV6;A0A6I8PRM6;B1ALU3;A0A6I8PTT2;O95490-3;O95490-7;O95490-5;O95490;O95490-2;O95490-4;O95490-6 ADGRL2;LPHN2 Latrophilin-2 yes no 0 0 0 7 0 1 47.674 47.762 2 0.0006486 12603 20230619_1887_Aki_TMTPro18x_K_F7 133.81 80.48 22554 20883 25716 23679 23626 24541 26527 26425 34322 30395 35510 36023 30496 26988 35752 37069 37655 37171 20896 19136 25815 23712 24773 24805 26827 26974 34547 30678 36171 36017 31544 28660 36375 37090 36006 35306 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39170000 20228 1604 18927 38376 30773 30773 1 9606 Homo sapiens -0.01952996195882406 NSIEDIHAFAIR Unmodified 1384.7099 0.709913 1252 A0A140VKG4;Q9NRY5;B4E1J2;B3KTE4;E7ESJ7;B4DQT0 FAM114A2 Protein FAM114A2 yes no 0 0 0 5.5 0.5 1 1 50.413 50.489 3 5.5599E-10 14118 20230619_1886_Aki_TMTPro18x_K_F6 155.8 123.39 49439 37201 43850 44649 43011 44641 50995 49111 60916 52321 51051 51637 52244 51260 51041 53608 55151 48675 45649 34133 45000 44497 44958 45258 51252 49954 61084 52706 52906 52434 53281 52975 52161 53564 52684 46308 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49087000 20229 1252 18928 38377;38378 30774 30774 1 9606 Homo sapiens 0.03294643512231232 NSIPEPIDPLFK Unmodified 1368.7289 0.7289171 3613 P49792;A0A8V8TLA0;A0A8V8TL79;A6NKT7;J3KNE0;Q7Z3J3;A0A8Q3SIN4;B4DYH0;F8VYC4;A0A286YES2;Q99666;O14715;P0DJD1;P0DJD0;A0A8Q3SII4;A0A8Q3SII5;J3KQ37;V9HWE4;D3DX73;B4DTT2;B4DZH4;F8W705;Q99666-2 RANBP2;RGPD3;RGPD4;RGPD1;RGPD5;RGPD8;RGPD2;HEL161;hCG_1994636 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 1 yes no 0 0 0 6 0 1 61.806 61.86 2 0.076073 18954 20230619_1886_Aki_TMTPro18x_K_F6 58.63 41.604 47836 37776 41852 48959 38419 45686 51395 46469 59134 56927 51529 51851 58588 45725 57535 64098 61347 65801 44177 34680 43013 48474 40571 46456 51289 47720 59513 56825 53551 52670 59503 48372 58772 64186 58690 62464 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22160000 20230 3613 18929 38379 30775 30775 1 9606 Homo sapiens 0.05930180083259984 NSIQFTDGYEVK Unmodified 1399.662 0.66195975 1408 B1AXG1;P51812;A0A384MDW3;B7ZB17;B4DG22;B4DKZ2;A0A2R8Y603;Q7Z2J4 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes no 0 0 0 6 0.816 1 1 1 52.902 52.975 3 1.5792E-05 15011 20230619_1885_Aki_TMTPro18x_K_F5 106.29 89.76 61093 54470 56074 64910 56589 60785 66187 63461 73752 75985 68845 74562 82724 64647 67397 93209 85526 80900 56484 49942 57441 64645 58996 61859 66407 65001 74561 76069 71506 75433 83245 68532 69945 92438 81623 76986 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171120000 20231 1408 18930 38380;38381;38382 30776 30776 1 9606 Homo sapiens -0.02188475198499873 NSIVNSQPPEK Unmodified 1211.6146 0.61461563 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8 XPO7 Exportin-7 yes no 0 0 0 6 0 1 41.695 41.789 3 0.0028567 10267 20230619_1886_Aki_TMTPro18x_K_F6 85.288 59.761 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20232 2083 18931 38383 30777 30777 1 9606 Homo sapiens 0.01727290321196051 NSLDCEIVSAK Unmodified 1234.5864 0.58635197 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;B4DNY3;B4DNA3;B4DUZ8 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 0 0 4.5 0.5 1 1 49.491 49.547 2 8.4427E-23 13744 20230619_1883_Aki_TMTPro18x_K_F4 279.9 204.98 160990 131290 140310 147410 147720 159650 169560 167270 189380 192780 199220 198670 220510 185220 174570 235780 220720 209360 148700 120350 144410 147770 153470 160730 170320 171030 192250 193640 204820 201050 222220 194140 181200 234470 210660 199180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 160020000 20233 2327 18932 38384;38385 30778;30779 30778 2 9606 Homo sapiens -0.021557756504080317 NSLDSFGGR Unmodified 951.44101 0.44100836 4029 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 0 5.5 0.5 1 1 41.186 41.277 2 0.00060649 10039 20230619_1885_Aki_TMTPro18x_K_F5 129.83 101.43 118030 97258 99517 104720 122200 125370 123700 123770 140500 152520 149540 150690 162720 132940 131290 162980 161730 151280 109000 89115 103000 105460 125160 125230 125150 127290 142660 152520 153560 152450 164140 139320 135910 162560 154380 143840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202990000 20234 4029 18933 38386;38387 30780 30780 1 9606 Homo sapiens -0.03665450664414038 NSLEDLTAEDFR Unmodified 1408.647 0.64703797 2891 E7EMW7;O95071-2;O95071;E7ET84;B3KML2 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 0 0 0 2 0 1 56.008 56.026 2 4.8966E-07 17016 20230619_1881_Aki_TMTPro18x_K_F2 191.79 164.16 52144 43495 45709 46861 42145 48746 48049 45825 60807 62765 58191 47837 59827 52603 50097 72378 60577 64276 48173 39852 46921 47095 44272 49101 48503 47469 61147 62089 59815 49462 60570 55149 51818 71891 57884 61122 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48542000 20235 2891 18934 38388 30781 30781 1 9606 Homo sapiens -0.04093967066501136 NSLESYAFNMK Unmodified 1302.5914 0.59143734 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96BE0;E9PS65;Q96H53;E9PM13;Q9NZ87;Q9NWW3 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 0 0 6.2 2.64 1 2 2 57.799 57.841 2;3 1.7308E-23 16875 20230619_1888_Aki_TMTPro18x_K_F8 309.94 275.98 542900 466050 512110 548450 387990 517040 550230 456680 580960 707360 585990 480320 696750 597040 627870 718140 646350 595400 501930 427320 521260 546740 417900 523800 546280 477710 591120 694670 605200 502190 704330 618480 641170 712650 617900 567000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5404200000 20236 3430 18935 38389;38390;38391;38392;38393 30782;30783;30784 30784 3 9606 Homo sapiens -0.04775471787797869 NSLESYAFNMK Oxidation (M) 1318.5864 0.58635197 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96BE0;E9PS65;Q96H53;E9PM13;Q9NZ87;Q9NWW3 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 1 0 7.67 0.471 1 2 52.9 52.975 3 3.6468E-05 14646 20230619_1887_Aki_TMTPro18x_K_F7 132.03 87.263 903720 917340 1016400 990670 971830 975280 1073300 1019700 1053600 1102000 1270900 1021700 1222200 1009900 1129500 1418600 1091200 1008800 837770 839970 1022200 994910 1014300 989110 1076200 1041100 1083100 1106800 1290000 1042300 1244100 1063300 1149800 1395400 1043900 962760 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4765800000 20237 3430 18935 38394;38395;38396 30785;30786;30787 30785 2056 3 9606 Homo sapiens -0.060197756504067 NSLGGDVLFVGK Unmodified 1204.6452 0.64518747 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 0 0 4.5 3.5 1 1 58.927 58.948 2;3 3.3486E-10 17361 20230619_1888_Aki_TMTPro18x_K_F8 226.33 169.15 149610 130780 134920 145270 116750 145580 154340 152330 178490 180780 160980 157810 186510 164600 156220 193660 172340 177740 138290 119840 138100 145580 123910 147350 154190 155910 179850 180500 167080 161500 188160 171080 160480 193160 164780 168970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 130240000 20238 2350 18936 38397;38398 30788;30789 30789 2 9606 Homo sapiens 0.05105068706234306 NSLISSLEEEVSILNR Unmodified 1801.9422 0.94215736 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;H0YFY6;Q96HN5;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 5.5 0.5 1 1 65.54 65.584 3 1.3778E-42 20568 20230619_1886_Aki_TMTPro18x_K_F6 273.49 233.42 32609 24504 28661 27416 23698 27146 31356 29349 33121 29433 36751 33650 34409 34380 31782 34850 31325 35354 30107 22468 29363 27464 25228 27527 31233 29844 33755 29880 37412 34017 35096 35439 32359 35039 30003 33559 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 298950000 20239 349;3906 18937 38399;38400 30790;30791 30791 2 9606 Homo sapiens 0.07326396281678171 NSLLSLSDT Unmodified 948.47639 0.47639081 4152 Q7L2H7;Q7L2H7-2 EIF3M Eukaryotic translation initiation factor 3 subunit M yes no 0 0 0 4 0 1 59.557 59.559 2 2.3442E-05 18131 20230619_1883_Aki_TMTPro18x_K_F4 168.08 150.69 87763 80111 75781 81764 81197 94023 89977 89227 131880 101560 96923 84918 103070 89587 89777 111360 98334 104800 81119 73344 78103 82640 84290 94068 91467 91797 130510 101570 101250 87190 104400 93414 92121 111130 94047 99584 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69523000 20240 4152 18938 38401 30792;30793 30792 2 9606 Homo sapiens 9.167072710170032E-05 NSLPDTVQIR Unmodified 1141.6091 0.60913632 3667 P56537;B7ZBH1 EIF6 Eukaryotic translation initiation factor 6 yes no 0 0 0 5 1.41 1 1 1 1 1 45.314 45.388 2 7.658E-06 11844 20230619_1886_Aki_TMTPro18x_K_F6 182.92 135.84 286700 255780 298640 292290 307940 330290 350280 313540 406280 403610 406940 354010 365310 371730 352820 440770 444230 416700 265340 234430 302500 292800 320180 330840 352380 323920 410770 401700 415310 362480 374090 386270 364520 440240 423960 396140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 674820000 20241 3667 18939 38402;38403;38404;38405;38406 30794;30795 30795 2 9606 Homo sapiens 0.04399611529356662 NSLPELSR Unmodified 914.48214 0.48214489 228 A0A024R394;Q9UHD1;A0A024R3C3;Q9UHD1-2;E9PHZ2;Q9NZ93 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes no 0 0 0 5 0.816 1 1 1 42.346 42.42 2 0.022623 10562 20230619_1885_Aki_TMTPro18x_K_F5 86.67 55.441 141500 107620 118000 144450 126410 146560 132210 141620 163170 186810 271130 295570 235830 237840 189480 213680 290900 305470 130600 98853 122110 142820 130960 147900 134050 146280 168690 189620 271620 293030 239900 245850 199220 220210 277460 289110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 468470000 20242 228 18940 38407;38408;38409 30796 30796 1 9606 Homo sapiens 0.02148310375048368 NSLQEQQEEEEEARK Unmodified 1845.8341 0.83406347 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 1 1 0 1 36.991 36.991 3 6.6549E-14 8791 20230619_1880_Aki_TMTPro18x_K_F1 175.02 141.18 154210 122870 135940 129690 151160 138420 156160 162960 178670 179030 225090 215860 216680 184770 169080 242450 239550 226310 142430 112580 139760 130660 155780 140010 157930 165180 182540 181150 228250 216580 219200 194610 177070 241590 228430 215170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 257360000 20243 3549 18941 38410 30797 30797 1 9606 Homo sapiens -0.055020200395347274 NSLTSKDPDIK Unmodified 1216.6299 0.62993134 3904 Q14974;B2RBR9;J3QR48 KPNB1 Importin subunit beta-1 yes no 0 0 1 6.5 0.5 1 1 43.515 43.601 3 2.0297E-06 10708 20230619_1887_Aki_TMTPro18x_K_F7 135.04 102.98 791970 736880 763890 722500 895740 772460 840000 829340 836850 923930 1059900 692190 704800 549670 1028700 497970 578300 259050 732730 674370 779740 732270 916640 779720 850460 845640 861670 921210 1059500 708760 744820 568990 1012500 489970 555460 249750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 752730000 20244 3904 18942 38411;38412 30798;30799 30799 2 9606 Homo sapiens 0.030281571183650158 NSLVTGGEDDR Unmodified 1161.5262 0.52619455 3977 Q68DW7;Q4LE48;Q8WVM7-2;Q8WVM7;B4E2Q7 DKFZp781D1416;STAG1 variant protein;STAG1 Cohesin subunit SA-1 yes no 0 0 0 1 0 1 36.734 36.734 2 0.013994 8664 20230619_1880_Aki_TMTPro18x_K_F1 78.342 46.969 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20245 3977 18943 38413 30800 30800 1 9606 Homo sapiens -0.04810749989269425 NSLYDMAR Unmodified 968.43857 0.43856552 2142;4410 A8K9U0;Q9BWF3;E9PB51;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B no no 0 0 0 6 0 1 44.106 44.198 2 0.036302 11321 20230619_1886_Aki_TMTPro18x_K_F6 82.645 69.137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20246 2142;4410 18944 38414 30801 30801 1 9606 Homo sapiens -0.04691622393738726 NSMFHNR Oxidation (M) 920.39228 0.39228403 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3Q8APX7;A0A3S6H7Z6;A0A3Q8AIR8;A0A3S6H7Y4;A0A3Q8B027;B4DJ87;E9PIX6;A0A3Q8BCI7;E9PQ98;A0A3S6H824;A0A3S6H942;Q99873-5;A0A3S6H7K8;E9PNR9;A0A3Q8AIS5;H0YDE4;A0A3Q8B4N0;A0A3Q8B9M1;A0A3S6H8B5;A0A3S6H758;A0A3S6H7X9;A0A3S6H7W7;A0A3Q8B9M7;A0A3Q8AX88;A0A3Q8ATG4;A0A3Q8AX95;E9PMW9;A0A3Q8B032;A0A3S6H8V5;E9PMZ2 PRMT1 Protein arginine N-methyltransferase 1 yes no 0 1 0 3.33 1.7 1 1 1 24.99 25.037 3 0.010549 4205 20230619_1885_Aki_TMTPro18x_K_F5 86.866 61.245 8290.6 4984.8 7062.1 5560.1 9337.4 8762.5 8481.6 8272.7 11396 5679.3 5012.6 2601.9 5970.1 5440.4 6044 4010.6 5092.7 3988.9 7644 4575.2 7299.2 5615.3 9491.8 8610.4 8685.2 8410.3 11176 5801.2 5470.3 2729.2 6070.3 5445.1 6080 4060.4 4874.2 3793 3 3 3 3 3 3 3 3 3 3 3 2 3 3 3 3 3 3 2724400 20247 1536 18945 38415;38416;38417 30802;30803;30804 30803 1013 3 9606 Homo sapiens -0.07109642505156444 NSMFHNR Unmodified 904.39737 0.3973694 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3Q8APX7;A0A3S6H7Z6;A0A3Q8AIR8;A0A3S6H7Y4;A0A3Q8B027;B4DJ87;E9PIX6;A0A3Q8BCI7;E9PQ98;A0A3S6H824;A0A3S6H942;Q99873-5;A0A3S6H7K8;E9PNR9;A0A3Q8AIS5;H0YDE4;A0A3Q8B4N0;A0A3Q8B9M1;A0A3S6H8B5;A0A3S6H758;A0A3S6H7X9;A0A3S6H7W7;A0A3Q8B9M7;A0A3Q8AX88;A0A3Q8ATG4;A0A3Q8AX95;E9PMW9;A0A3Q8B032;A0A3S6H8V5;E9PMZ2 PRMT1 Protein arginine N-methyltransferase 1 yes no 0 0 0 4.5 0.5 1 1 28.867 28.94 3 0.021032 5351 20230619_1885_Aki_TMTPro18x_K_F5 75.189 54.86 13646 10171 13065 13888 20418 18795 18397 18138 22471 10890 10999 11090 12034 9955.8 12286 9972.8 14579 9908.1 12606 9345.4 13433 13781 20548 18622 18777 18378 22174 11423 11874 11214 12268 10309 12600 10028 13895 9428.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4634700 20248 1536 18945 38418;38419 30805 30805 1 9606 Homo sapiens -0.05865338642547613 NSMPASSFQQQK Oxidation (M) 1367.614 0.6139637 4715;4568 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1;Q9NQ29-3;Q9NQ29;A8MYV2;Q1W6G4;Q53G47;Q9NQ29-2;D3DU41;B8ZZ10 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 no no 0 1 0 6 2.92 1 1 2 38.399 38.415 3 7.7064E-10 8623 20230619_1887_Aki_TMTPro18x_K_F7 174.05 151.17 121400 91238 111380 115330 136620 151440 126780 136680 185770 116490 122930 108520 120220 103830 118580 118860 130320 102310 112120 83757 114370 114960 139790 150040 130190 140050 183200 118740 128860 110450 122760 108030 121250 118300 124390 97455 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 354040000 20249 4715;4568 18946 38420;38421;38422;38423 30806;30807;30808;30809 30807 2815 4 9606 Homo sapiens -0.05513872390179131 NSMPASSFQQQK Unmodified 1351.619 0.61904908 4715;4568 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1;Q9NQ29-3;Q9NQ29;A8MYV2;Q1W6G4;Q53G47;Q9NQ29-2;D3DU41;B8ZZ10 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 no no 0 0 0 8 0 1 42.905 42.908 3 6.76E-06 10637 20230619_1888_Aki_TMTPro18x_K_F8 138.89 127.36 42000 36245 36966 35127 43339 47337 41853 41543 53173 37688 39000 34244 41657 36654 39521 41924 40740 35063 38811 33176 38052 35755 44500 46830 42626 42726 52926 38236 40767 35036 42345 37997 40304 41662 38929 33397 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104320000 20250 4715;4568 18946 38424 30810 30810 1 9606 Homo sapiens -0.042695685275703 NSNIAQNYR Unmodified 1078.5156 0.51557028 4146 Q765P7 MTSS1L MTSS1-like protein yes yes 0 0 0 7 0 1 33.662 33.744 2 0.0051357 6816 20230619_1887_Aki_TMTPro18x_K_F7 87.639 65.508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20251 4146 18947 38425 30811 30811 1 9606 Homo sapiens -0.020546878530694812 NSNILEDLETLR Unmodified 1415.7256 0.72562264 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;Q6P1Q5 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 0 3.5 0.5 2 2 62.846 62.864 2;3 6.5473E-10 19540 20230619_1883_Aki_TMTPro18x_K_F4 233.45 181.32 124130 107540 111250 124660 106870 131110 117780 133630 147930 154930 146410 140310 158900 142230 139560 177680 151780 164390 114730 98583 114110 124590 111830 132130 119120 136850 149020 154990 150780 143230 160920 148490 143150 177130 145190 156230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 210790000 20252 2181 18948 38426;38427;38428;38429 30812;30813 30813 2 9606 Homo sapiens 0.03438885238574585 NSNLVGAAHEELQQSR Unmodified 1751.8551 0.85507368 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 5.5 1.5 2 2 1 1 39.536 39.592 3 4.3482000000000005E-35 9767 20230619_1887_Aki_TMTPro18x_K_F7 266.44 244.55 290320 224350 293470 339590 383160 407980 401740 409990 445170 357720 393550 401400 395800 338910 379520 376440 421840 397060 268380 206350 299530 334200 391250 407250 405230 417240 448740 365760 406410 403420 403190 353630 388510 378900 403030 377000 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 2003199999.9999998 20253 1428 18949 38430;38431;38432;38433;38434;38435 30814;30815;30816;30817;30818;30819 30818 6 9606 Homo sapiens 0.009220348506005394 NSNPALNDNLEK Unmodified 1327.6368 0.63680763 1305 A0A1U9X8Y4;Q5SRT3;Q53FB0;O00299 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 yes no 0 0 0 4 0.707 1 2 1 44.163 44.222 2;3 9.153E-08 11347 20230619_1883_Aki_TMTPro18x_K_F4 166.62 135.75 342210 273770 279550 296450 374740 386270 394240 416590 499600 366560 430390 408360 468830 378130 411410 458520 408810 387680 315910 250890 290740 298870 382320 384590 399490 421950 499780 374640 446330 411990 474390 395240 419470 455440 391030 369050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 964990000 20254 1305 18950 38436;38437;38438;38439 30820;30821;30822 30822 3 9606 Homo sapiens -0.013905300010492283 NSNVDSSYLESLYQSCPR Unmodified 2117.9324 0.9323973 2740 C9J6P4;Q7Z2W4;A0A514C937;Q7Z2W4-2;A0A7P0T8C6;Q05DV5;H7C5K1;Q7Z2W4-4;Q7Z2W4-5 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 0 6.5 0.5 1 1 56.667 56.733 3 7.7206E-39 16747 20230619_1886_Aki_TMTPro18x_K_F6 258.82 226.75 79211 63163 73527 72897 70010 84582 77273 83026 87000 92035 85992 90629 100290 86276 86420 106440 102470 113630 73189 57919 75113 73000 73273 84600 77831 85137 88107 92481 88931 91929 101260 90223 89121 106980 97964 107810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 121570000 20255 2740 18951 38440;38441 30823;30824;30825 30824 3 9606 Homo sapiens -0.08185159785989526 NSNVETLK Unmodified 903.46616 0.46616048 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7;Q32P42;A8K3I2;A0A494C122;E7ESD9;A0A494BZX5;A0A494C0Y7 RAD50 DNA repair protein RAD50 yes no 0 0 0 5 0 1 40.368 40.456 2 0.0019912 9726 20230619_1885_Aki_TMTPro18x_K_F5 148.62 76.387 53352 32425 63867 64578 85397 84101 69687 87851 86501 58941 93823 108740 78580 84427 93701 45871 101160 101030 49334 29972 64315 62786 86493 83600 71754 88671 87324 62648 95379 107200 81518 85817 95152 49975 96712 95373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22564000 20256 4309 18952 38442 30826 30826 1 9606 Homo sapiens 0.010566041381594005 NSPEAWCAAGNCFSLQR Unmodified 1966.8414 0.84141423 2524 B4DL80;G5EA36;P30260;P30260-2 CDC27 Cell division cycle protein 27 homolog yes no 0 0 0 1 0 1 54.599 54.599 3 3.5129E-07 16252 20230619_1880_Aki_TMTPro18x_K_F1 125.96 121.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20257 2524 18953 38443 30827 30827 1 9606 Homo sapiens -0.10333282244482689 NSPGSQVASNPR Unmodified 1212.5847 0.58471248 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2 XRN2 5'-3' exoribonuclease 2 yes no 0 0 0 5 0.816 1 1 1 29.049 29.109 2 0.00070826 5500 20230619_1886_Aki_TMTPro18x_K_F6 97.911 58.369 16196 6850.7 18170 15202 24642 27644 21219 24083 22684 17164 21986 23764 21507 21057 17270 12000 24416 23929 14946 6335 18374 14818 24989 26903 21647 24643 22982 17927 22577 23713 21787 21334 17998 12893 23289 22603 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 25532000 20258 2350 18954 38444;38445;38446 30828;30829 30829 2 9606 Homo sapiens -0.013076486241743623 NSPLLSVSSQTITK Unmodified 1473.8039 0.80387296 237 A0A024R3D4;Q8ND24;E9PRE9 DKFZp547C195;RNF214 RING finger protein 214 yes no 0 0 0 2.5 0.5 1 1 54.347 54.382 3 0.0013506 16125 20230619_1882_Aki_TMTPro18x_K_F3 74.966 58.742 55746 45333 58923 58943 50176 59785 66358 61818 63127 56164 48679 50324 56064 48499 57159 57143 58712 50988 51569 41616 59473 58427 53244 60420 65867 62879 63920 56895 50987 51293 57053 50540 58185 56949 56107 48522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130110000 20259 237 18955 38447;38448 30830 30830 1 9606 Homo sapiens 0.085923178238545 NSPLPNCTYATR Unmodified 1392.6456 0.64559818 749 A0A024RD56;Q5JTD0-2;Q5JTD0;B3KT40;Q5JTD0-4 TJAP1 Tight junction-associated protein 1 yes no 0 0 0 8 0 1 41.033 41.026 2 0.012242 9898 20230619_1888_Aki_TMTPro18x_K_F8 76.143 60.252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20260 749 18956 38449 30831 30831 1 9606 Homo sapiens -0.035018796362464855 NSPLVSR Unmodified 771.4239 0.42390173 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 6 1.41 1 1 1 1 1 33.876 33.929 2 0.032795 6824 20230619_1887_Aki_TMTPro18x_K_F7 93.992 55.2 419230 232850 406680 467800 531550 535740 496450 515810 640640 486950 661580 659410 627690 586570 563350 402030 721490 643100 386780 215360 416350 453520 541140 535820 507060 527590 644590 499250 676180 658790 639080 597730 581730 421120 688250 608560 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1156800000 20261 297 18957 38450;38451;38452;38453;38454 30832;30833 30832 2 9606 Homo sapiens 0.029046735204246943 NSPVEAVFSYLTGK Unmodified 1510.7668 0.76675917 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPW9;A0A8V8TPX4;A0A8V8TRC7;H7C3P6;A0A3B3ITD8 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 3.5 0.5 1 1 65.953 65.977 3 0.014413 20794 20230619_1883_Aki_TMTPro18x_K_F4 62.104 49.003 6899.3 6585.9 6643.1 6785.6 5531.4 7876.6 6866.6 7899.5 8454.5 14757 18445 40080 20847 27684 15317 15120 18669 58392 6384.3 6029.2 6755.9 6855.1 5886.2 7882.5 6907.2 8261.7 8941.2 15296 18699 39009 20999 28309 15870 17807 18105 54857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13868000 20262 1852 18958 38455;38456 30834 30834 1 9606 Homo sapiens 0.03180646278065069 NSQDDYDEERK Unmodified 1397.5695 0.56951593 3327 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;O76094-2;Q71V07;R4GNC1;D6RDY6 HEL103;SRP72 Signal recognition particle subunit SRP72 yes no 0 0 1 1.5 0.5 1 1 32.658 32.688 3 0.00018498 7065 20230619_1880_Aki_TMTPro18x_K_F1 104.81 100.26 24954 14074 31431 33637 52200 61029 35174 47404 40046 32753 54093 60443 40609 43951 49602 22585 61085 58140 23079 13056 31717 32665 52138 59260 36647 48931 41035 34731 54305 59486 42368 44742 50758 25122 58314 54856 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54752000 20263 3327 18959 38457;38458 30835 30835 1 9606 Homo sapiens -0.11336605002702527 NSQGEEVAQR Unmodified 1116.516 0.51596421 3482 P20700;B4DZT3 LMNB1 Lamin-B1 yes no 0 0 0 1 0 1 27.312 27.312 2 0.079924 4964 20230619_1880_Aki_TMTPro18x_K_F1 60.518 45.437 3602.4 2351.3 6277.4 5057.7 9882.6 7949.8 2958.5 6615.6 4714.3 3981.6 8673.3 8627.8 6336.1 7081.1 7531.7 2566.2 8572.2 6813.6 3347.3 2175.4 6192.7 4919.7 9769.1 7790.7 3458.5 6770.2 4857.6 4305.8 8610.2 8491.1 6607 7111.3 7666.1 2907.9 8179.5 6433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9699100 20264 3482 18960 38459 30836 30836 1 9606 Homo sapiens -0.03763312923842932 NSQLEQENNLLK Unmodified 1428.7209 0.72087161 780 A8K3Y6;A0A024RDV8;Q15714-2;Q15714-3;Q15714;A0A087X0H8 TSC22D1 TSC22 domain family protein 1 yes no 0 0 0 4.5 0.5 1 1 48.443 48.5 3 6.76E-06 13300 20230619_1883_Aki_TMTPro18x_K_F4 138.89 120.06 74210 68627 65825 88022 94788 99904 93072 94463 119900 88352 103380 114600 103220 92684 93587 111070 117430 107930 68611 62961 68139 87411 96142 99998 94726 96730 119860 90476 106900 114410 104970 97246 96743 111100 112060 102580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45428000 20265 780 18961 38460;38461 30837 30837 1 9606 Homo sapiens 0.02366001095856518 NSRPEANEALER Unmodified 1384.6695 0.66950474 2612 B4DWC4;Q6FIC5;Q9Y696;Q9NVF8 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 0 1 3 1.58 1 1 1 1 29.724 29.777 3 4.5039E-07 5578 20230619_1881_Aki_TMTPro18x_K_F2 166.6 117.3 95720 77293 84199 58691 79896 78661 76731 77189 99366 116540 126290 112470 124460 112780 96593 129990 119270 98157 88414 70644 86242 61221 83242 78117 78314 79960 101090 115540 128080 114430 125810 117150 100140 128500 113750 93645 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3124199999.9999995 20266 2612 18962 38462;38463;38464;38465 30838;30839 30839 2 9606 Homo sapiens -0.007443228782221922 NSSAFSYQR Unmodified 1058.4781 0.47812215 1770 A0A8I5QKW0;E9PKK4;G3V1A9;A0A8I5KT00;P42695 NCAPD3 Condensin-2 complex subunit D3 yes no 0 0 0 8 0 1 37.079 37.065 2 0.0019446 8288 20230619_1888_Aki_TMTPro18x_K_F8 111.06 82.658 41954 30749 33094 30598 35802 49846 37240 38303 65748 12435 13726 11540 10359 10434 21135 10503 17105 9128.4 38700 28169 34392 31182 37178 48656 38302 39223 63103 14049 16381 11746 11229 10794 21017 10514 16350 8714 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14562000 20267 1770 18963 38466 30840 30840 1 9606 Homo sapiens -0.04877779118669423 NSSILPR Unmodified 785.43955 0.43955179 4742 Q9Y512;B4DN54;B3KUE6 SAMM50 Sorting and assembly machinery component 50 homolog yes no 0 0 0 5.33 3.09 1 1 1 38.269 38.293 2 0.04865 8814 20230619_1888_Aki_TMTPro18x_K_F8 86.833 34.15 61424 50044 58316 57681 77588 78554 67909 69997 105280 73012 81688 78958 82222 67355 72227 77792 90021 74145 56772 45885 59773 57911 78832 77680 70163 72155 104100 73889 84903 79509 83436 70414 74626 77797 85850 70520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51765000 20268 4742 18964 38467;38468;38469 30841;30842 30842 2 9606 Homo sapiens 0.03824960037468372 NSSISGPFGSR Unmodified 1107.5309 0.530886 674 B4DNL1;Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DJV5 PWP1 Periodic tryptophan protein 1 homolog yes no 0 0 0 1.5 0.5 1 1 42.067 42.106 2 0.00018952 10788 20230619_1881_Aki_TMTPro18x_K_F2 152.64 109.57 60076 45550 51165 56056 59839 64852 59344 65806 76103 64582 70525 57120 67724 61031 60816 77642 73360 59423 55457 41803 52873 55867 61496 64933 60394 67095 76323 65139 72397 58552 68920 63667 62745 76695 69973 56684 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51075000 20269 674 18965 38470;38471 30843 30843 1 9606 Homo sapiens -0.01857821055864406 NSSLLSFDNEDENE Unmodified 1611.6536 0.65363949 4324 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 yes yes 0 0 0 1 0 1 59.628 59.628 2 0.00018129 18336 20230619_1880_Aki_TMTPro18x_K_F1 107.83 107.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20270 4324 18966 38472 30844 30844 1 9606 Homo sapiens -0.12772118696398138 NSSNTSVGSPSNTIGR Unmodified 1576.7441 0.74412625 1818 Q7Z460;Q7Z460-3;Q7Z460-5;Q7Z460-4;Q7Z460-2;A0A8V8TLP7;F8WA11;A0A8V8TQK9;A0A8V8TRF6;H0Y5T1;B7Z4E5;B7Z7Q8;B7Z5R7;Q68D09;B7Z2P0;B7Z7C4;B7Z4J0 CLASP1;DKFZp686D1968 CLIP-associating protein 1 yes no 0 0 0 7 0 1 34.539 34.615 2 1.2451E-05 7155 20230619_1887_Aki_TMTPro18x_K_F7 131.35 115.13 6493.5 4663.6 5044.3 4837.1 4522.4 4692.2 6358.6 4946.7 6465.7 5981.8 9873.7 10194 8349.1 11823 9872.7 8106.4 12210 10706 5988.7 4274.1 5235.9 4873.2 4787.9 4765.3 6307.3 5070.9 6704.7 6123.6 9909.4 10213 8675.4 11924 10131 8360.8 11650 10147 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14211000 20271 1818 18967 38473 30845 30845 1 9606 Homo sapiens -0.021176048574716333 NSSPEDLFDEI Unmodified 1264.5459 0.54592694 632 A0A024RAQ8;Q13426;A0A024RAL0;Q13426-2 XRCC4 DNA repair protein XRCC4 yes no 0 0 0 1 0 1 64.669 64.669 2 0.054402 20393 20230619_1880_Aki_TMTPro18x_K_F1 64.04 49.374 7138.9 10253 11076 8731.9 8025.5 10968 9580 10254 13495 11720 11466 11230 12988 10480 12862 13191 10409 11523 6662.5 9362.5 10867 8987.6 8632.1 10908 9696.8 10559 13443 11757 11926 11401 13195 10979 12948 13119 9990.2 10958 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11885000 20272 632 18968 38474 30846 30846 1 9606 Homo sapiens -0.07576418769190241 NSSTIIQNPVETPKK Unmodified 1654.889 0.88899957 3565 P38432 COIL Coilin yes yes 0 0 1 1 0 1 45.747 45.747 3 0.00034739 12596 20230619_1880_Aki_TMTPro18x_K_F1 88.73 69.052 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20273 3565 18969 38475 30847 30847 1 9606 Homo sapiens 0.0877506328963591 NSSTYWEGK Unmodified 1070.4669 0.46688876 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 5.33 0.471 2 1 44.91 44.993 2 1.0509E-05 11676 20230619_1886_Aki_TMTPro18x_K_F6 192.91 136.47 185760 162730 163650 161470 173990 194520 194310 182570 235340 252320 273680 260820 277870 239510 225460 269410 304220 264680 171670 148970 168230 163730 180580 194020 196010 189190 239020 251540 279010 263690 281040 249320 234750 269890 290040 251590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180870000 20274 2326 18970 38476;38477;38478 30848;30849 30849 2 9606 Homo sapiens -0.06552601212820264 NSSVIVR Unmodified 773.43955 0.43955179 1366 A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;Q7Z6E9-4;H3BUN0;I3L3Y2;Q7Z6E9-3 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 0 0 0 7 0 1 33.308 33.395 2 0.064947 6684 20230619_1887_Aki_TMTPro18x_K_F7 79.474 30.116 24572 12584 24262 22012 30441 31682 27271 35035 36457 19971 30977 31081 26454 28251 29400 18149 59515 32535 22666 11619 24748 21580 31046 31361 27981 35126 36329 21351 31848 30953 27366 28689 31426 19247 56466 30848 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8433400 20275 1366 18971 38479 30850 30850 1 9606 Homo sapiens 0.043769600374730544 NSSYFVEWIPNNVK Unmodified 1695.8257 0.82567103 3748;1486;3381;983;1424;3870;2562;3176 Q9BV28;A0A0B4J269;Q13509;B2RBD5;Q13509-2;A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DXZ5;Q96B85;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;P04350;B4DJ43;B4DE77;B4DFH6;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB3;TUBB2B;DKFZp566F223;TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB4A;TUBB6 Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-4A chain;Tubulin beta-6 chain no no 0 0 0 2 0.555 2 9 2 66.697 66.708 2;3 9.2482E-16 19703 20230619_1881_Aki_TMTPro18x_K_F2 245.08 214.46 720480 641520 737610 712810 577110 718430 690500 728980 844190 909490 891120 971360 875430 883160 893210 929020 918420 1010000 666710 587810 745330 714500 616010 726350 694910 748790 853550 911270 911890 979780 895730 915690 909590 937400 879130 958150 12 12 12 12 12 12 12 12 12 12 11 12 12 11 12 12 12 12 2280900000 20276 983;1424;1486;3748;3870;3381;2562;3176 18972 38480;38481;38482;38483;38484;38485;38486;38487;38488;38489;38490;38491;38492 30851;30852;30853;30854;30855;30856;30857;30858;30859;30860;30861;30862 30852 12 9606 Homo sapiens 0.005591225724174365 NSTFSEIFK Unmodified 1071.5237 0.52367535 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8 HEL107;TKT Transketolase yes no 0 0 0 8 0 1 57.374 57.426 2 2.8566E-06 16742 20230619_1888_Aki_TMTPro18x_K_F8 213.24 156.19 167830 126900 122880 165360 111190 184390 134170 137600 560410 251590 225370 255560 312020 278400 206000 347690 305450 348200 154770 116530 128700 163950 118600 183790 146670 146860 532430 249270 250650 260050 311040 290060 217630 347860 291590 330560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136880000 20277 3523 18973 38493 30863 30863 1 9606 Homo sapiens -0.00922553656278069 NSTFSEIFKK Unmodified 1199.6186 0.61863837 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8 HEL107;TKT Transketolase yes no 0 0 1 3 0 1 53.496 53.548 3 0.0011376 15708 20230619_1882_Aki_TMTPro18x_K_F3 93.839 64.492 299570 239890 254650 228700 218540 252510 258320 256800 479310 349630 378770 290660 394970 344360 324820 426560 359740 303570 276630 219610 261710 232480 231590 253790 264900 264450 471270 347070 393270 300070 399380 357610 334010 420210 343470 289840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1047299999.9999999 20278 3523 18974 38494 30864 30864 1 9606 Homo sapiens 0.02681379814907814 NSTFTEHLYR Unmodified 1266.5993 0.59929991 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3;Q9BTE3-3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 0 6.5 0.5 1 1 39.787 39.864 3 4.7138E-14 9170 20230619_1887_Aki_TMTPro18x_K_F7 195.51 168.84 65276 50371 66694 69976 69311 79568 62491 63227 81338 69335 79915 71739 76955 65793 72719 76175 76359 68737 60349 46283 67682 69152 71659 79337 64017 65899 81704 69867 81869 72559 78435 68597 74238 75968 72972 65394 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109120000 20279 1140 18975 38495;38496 30865;30866 30866 2 9606 Homo sapiens -0.023335764760076927 NSTLSEPGSGR Unmodified 1103.5207 0.52071524 2314 B2RDE8 yes yes 0 0 0 3.5 1.12 1 1 1 1 32.184 32.254 2 1.7308E-08 6402 20230619_1883_Aki_TMTPro18x_K_F4 209.21 173.94 179780 97513 215050 222500 316090 379670 227320 294400 296060 199430 330470 366600 287930 295550 296230 122170 331190 308010 166160 90400 217100 216160 318230 369630 236700 303880 298640 211920 335830 361780 295910 297960 302000 136620 316380 290670 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 534470000 20280 2314 18976 38497;38498;38499;38500 30867;30868;30869 30869 3 9606 Homo sapiens -0.026904287810793903 NSTSSIEPR Unmodified 989.47779 0.47778779 1017 E7EN19;Q53TX8;A0A0D9SEY1;B7Z388;O95819-3;O95819-6;G5E948;V9HWH3;O95819-2;B7Z3V5;Q5MD60 MAP4K4;HEL-S-31 Mitogen-activated protein kinase kinase kinase kinase 4 yes no 0 0 0 2.5 0.5 1 1 31.237 31.311 2 0.0021969 6103 20230619_1882_Aki_TMTPro18x_K_F3 119.68 43.616 23668 12344 26422 26537 33199 43811 31260 34173 30508 21570 37004 42497 36571 32298 33847 18138 43802 32167 21856 11434 26724 25825 33938 42714 31624 35231 31331 23124 37682 41812 37220 32901 34918 19302 41732 30446 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 24473000 20281 1017 18977 38501;38502 30870 30870 1 9606 Homo sapiens -0.01737198838520726 NSTWSGESK Unmodified 994.43559 0.43558863 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 0 5.5 0.5 1 1 39.271 39.36 2 1.8532E-06 9233 20230619_1885_Aki_TMTPro18x_K_F5 214.05 140.73 333160 171910 429530 377710 592130 644730 447230 641630 492910 339760 552450 581330 508770 537700 590970 146060 630130 474480 308090 159310 430400 367800 598010 631030 461410 646820 501280 366990 562530 577160 525190 535240 599030 173110 601440 447750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 887450000 20282 1658 18978 38503;38504 30871;30872;30873 30872 3 9606 Homo sapiens -0.061851742468888915 NSVEVALNK Unmodified 972.52401 0.52400971 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 0 6.5 0.5 1 1 46.812 46.898 2 5.1176E-06 12142 20230619_1887_Aki_TMTPro18x_K_F7 209.86 128.53 204870 157670 182330 185580 170080 194470 186100 182140 247030 231350 259660 284010 258190 238230 226070 263640 296510 291360 189200 144630 186920 185290 178280 195720 188650 188300 248640 232830 265870 284280 262220 248510 234540 265980 282980 276460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 200970000 20283 1102 18979 38505;38506 30874;30875 30875 2 9606 Homo sapiens 0.03664866063570571 NSVFQQGMK Oxidation (M) 1053.4913 0.49132937 3387;959 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z1Q9;B7Z3F8;B3KSY7;B3KNQ8;B4DRW5;Q5TC05;P05023;P05023-4;P05023-3;B7Z3V1;B3KRI1;B2RAQ4;P50993;B1AKY9;A0A0S2Z3W6;B7Z1N5;H0Y7C1;B3KX35;B3KW93;B4DIQ8 ATP1A3;ATP1A1;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2 no no 0 1 0 1 0 1 41.74 41.74 2 0.0018216 10842 20230619_1880_Aki_TMTPro18x_K_F1 106.88 81.43 42094 37987 40520 46339 54859 63809 59681 60861 81393 48450 46921 39828 42291 38355 51071 54563 48501 38492 38936 34836 41561 46334 56039 63111 60515 62017 80209 49441 49530 40835 43762 40440 51654 53667 46361 36766 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44984000 20284 959;3387 18980 38507 30876 30876 540 1 9606 Homo sapiens -0.03327664330936386 NSVLGPLYSQDR Unmodified 1347.6783 0.67827852 400 A0A024R6K3;Q86TU7;Q6NXR6;Q86TU7-3;Q86TU7-2 SETD3 Histone-lysine N-methyltransferase setd3 yes no 0 0 0 8 0 1 50.407 50.483 2 0.00031163 13691 20230619_1888_Aki_TMTPro18x_K_F8 112.7 78.906 29352 24981 31336 28862 32060 36322 35980 41662 49133 38443 30240 29640 34920 27167 36496 38602 39742 33910 27163 22902 31667 28949 33372 36282 36457 42067 48548 38770 32125 30415 35565 28724 37271 38339 37953 32279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13965000 20285 400 18981 38508 30877 30877 1 9606 Homo sapiens 0.018346507582464255 NSVNMDLD Unmodified 906.3753 0.37529656 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 1 0 1 49.256 49.256 2 0.052452 14066 20230619_1880_Aki_TMTPro18x_K_F1 70.69 37.174 42587 31745 39274 47595 49955 49473 45507 45542 61825 56755 56687 59590 57704 52585 46257 64476 69008 58544 39332 29199 40373 46756 50917 49797 46640 47106 61863 56864 58447 60124 58370 55074 48590 64219 65734 55707 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36865000 20286 769 18982 38509 30878 30878 1 9606 Homo sapiens -0.0816360790164481 NSVTGGTAAFEPSVDYCVVK Unmodified 2099.9834 0.98337024 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 6.67 0.471 1 2 57.748 57.806 3;4 2.9707E-16 17205 20230619_1886_Aki_TMTPro18x_K_F6 158.58 143.89 113080 92980 87724 95145 85659 120570 117330 112510 113700 150840 144760 139430 139420 122470 121300 154680 141670 148200 104370 85160 91286 96287 90223 119780 116360 116480 117420 149970 146780 141480 141620 128580 124980 154460 135400 140800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 393650000 20287 2980 18983 38510;38511;38512 30879;30880 30879 2 9606 Homo sapiens -0.02262210741173476 NSVTPDMMEEMYK 2 Oxidation (M) 1605.6361 0.63608063 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6 RPL5 60S ribosomal protein L5 yes no 0 2 0 3 0 1 46.203 46.281 3 0.00040917 12410 20230619_1882_Aki_TMTPro18x_K_F3 91.202 79.226 69752 61624 63032 82347 79794 68556 81975 83086 87621 84364 97148 84324 93886 81992 79422 104980 98804 101970 64478 56570 64939 81258 81467 70750 82703 83931 89310 85183 98982 85631 95264 85860 82231 104880 94369 96869 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48258000 20288 1916 18984 38513 30881 30881 1231;1232 1 9606 Homo sapiens -0.14251196818918288 NSVTPDMMEEMYK Unmodified 1573.6463 0.64625138 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6 RPL5 60S ribosomal protein L5 yes no 0 0 0 3.5 0.5 1 1 57.631 57.649 3 7.5475E-11 17319 20230619_1883_Aki_TMTPro18x_K_F4 173.59 162.31 168890 134400 148250 157420 110880 165940 157180 161800 202840 204340 192560 200220 256100 199430 176600 262070 238310 262990 155990 123260 151860 157230 119840 166970 157250 166700 203740 204150 200790 203500 255520 209170 184860 262120 227590 249680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 296810000 20289 1916 18984 38514;38515 30882 30882 1 9606 Homo sapiens -0.11762589093700626 NSVTPDMMEEMYKK Oxidation (M) 1717.7361 0.73612902 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6 RPL5 60S ribosomal protein L5 yes no 0 1 1 5.5 0.5 1 1 48.593 48.67 3 0.018071 13304 20230619_1886_Aki_TMTPro18x_K_F6 80.746 63.258 53330 50545 45755 48632 54085 50930 56283 48798 53758 60699 58109 47026 51700 36448 52756 40991 37820 27450 49304 46248 47243 49337 55509 51341 56532 50334 55126 60271 59071 47989 52935 38211 52736 40417 36258 26253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61452000 20290 1916 18985 38516;38517 30883 30883 1231;1232 1 9606 Homo sapiens -0.09402959485146312 NSVTPDMMEEMYKK Unmodified 1701.7412 0.7412144 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6 RPL5 60S ribosomal protein L5 yes no 0 0 1 6.5 0.5 1 1 54.26 54.33 3 1.9843E-05 15710 20230619_1886_Aki_TMTPro18x_K_F6 114.31 106.72 248910 234740 266320 224560 201000 248560 261540 269330 253200 309070 261100 187090 262710 198870 290340 180050 178850 118580 230510 214780 267890 228260 215650 250100 260120 274620 259050 306380 267210 195840 269020 203900 287960 178250 171780 113500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 467480000 20291 1916 18985 38518;38519 30884;30885 30884 2 9606 Homo sapiens -0.08158655622514743 NSVVEASEAAYK Unmodified 1266.6092 0.6091959 145 A0A024R1K7;Q04917;Q9H4N8;A2IDB2 YWHAH 14-3-3 protein eta yes no 0 0 0 4.5 0.5 2 2 47.066 47.126 2;3 8.5077E-06 12650 20230619_1883_Aki_TMTPro18x_K_F4 116.19 102.78 389240 303200 350300 410690 342320 360100 418770 413540 504570 474200 482090 507090 507390 477970 455570 582290 576790 506120 359510 278510 359340 405200 358300 369200 420430 420520 508230 477050 496940 512400 515060 499140 471530 578890 550210 481780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 561870000 20292 145 18986 38520;38521;38522;38523 30886;30887 30886 2 9606 Homo sapiens -0.013444332613062215 NSYLEVLLK Unmodified 1077.607 0.60701105 1478 A0A384NPU5;Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 0 1.5 0.5 1 1 62.51 62.51 3 0.0031612 19512 20230619_1880_Aki_TMTPro18x_K_F1 83 46.475 13994 9376.5 9148.5 10599 8187.3 14846 12503 13612 14607 16471 16060 18361 17482 19515 17541 21949 21669 24153 12888 8602.7 9699.6 10660 8757.3 14647 12422 14059 14828 16552 16491 18593 17838 20203 18089 22127 20710 22908 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22438000 20293 1478 18987 38524;38525 30888;30889 30888 2 9606 Homo sapiens 0.0713118279156788 NSYNNSQAPSPGLGSK Unmodified 1619.754 0.75396265 4660 Q9UHB7 AFF4 AF4/FMR2 family member 4 yes yes 0 0 0 8 0 1 41.911 41.908 3 0.00043913 10288 20230619_1888_Aki_TMTPro18x_K_F8 80.738 65.766 9880.5 7644.4 10626 10917 12162 13524 8868.4 12227 17199 14267 16686 13942 11457 11437 13781 11858 15721 16617 9138.8 7026.2 10754 10787 12440 13444 9401.7 12623 17016 14306 16895 14086 11983 11905 14070 12181 15029 15730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9838500 20294 4660 18988 38526 30890 30890 1 9606 Homo sapiens -0.03112416852104616 NSYVAGQYDDAASYQR Unmodified 1806.7809 0.78090569 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4;A0A8Q3WL93;A0A8Q3WLT0;A0A8Q3WL80;E7EM57;Q0PHS1;A0A8Q3WL83;E9PD92;A0A8Q3WL90;A0A2H4QGB2;A0A2H4QGB6;Q0PHS5;A0A2H4QGB8;A0A6G9IW12 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 3.5 0.5 1 1 43.925 43.982 3 1.1793E-42 11237 20230619_1883_Aki_TMTPro18x_K_F4 276.1 266.14 36369 28994 36534 32883 33132 40354 37497 36200 45737 46152 56671 53621 52717 51694 52853 50478 55895 60046 33625 26582 37029 33004 34841 40143 37826 37536 46546 46350 57439 54039 53976 53304 53898 51295 53479 56915 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 374140000 20295 1464 18989 38527;38528 30891 30891 1 9606 Homo sapiens -0.09021353031539547 NTAELQPESGK Unmodified 1172.5673 0.56733108 2230 Q6IAU5;B2R665;O15355;B4DDC8;B3KXL8;Q96IN7;Q59GB2 PPM1G Protein phosphatase 1G yes no 0 0 0 3.5 0.5 1 1 40.179 40.228 2 1.8568E-08 9699 20230619_1882_Aki_TMTPro18x_K_F3 192.44 161.37 53045 28832 65455 65872 82579 101830 65617 85244 82605 62060 95859 103420 92975 90559 83466 41677 101800 89891 49042 26729 65725 63868 84048 99744 67748 87548 83621 65260 97639 102580 94603 91245 85804 45531 97145 84912 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58131000 20296 2230 18990 38529;38530 30892 30892 1 9606 Homo sapiens -0.012049889498257471 NTAEWLLSHTK Unmodified 1298.6619 0.66190017 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;G3V2H3 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 0 0 1.5 0.5 1 1 53.272 53.289 3 3.4438E-05 15697 20230619_1880_Aki_TMTPro18x_K_F1 117.2 103.54 239410 187780 248560 180300 167020 195070 202600 197860 187660 249920 247830 223300 217210 186190 202590 256990 196390 191320 221390 171930 250070 183210 180880 196320 202010 203310 194650 248810 249940 226720 221920 196940 206240 253300 187930 182430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1716599999.9999998 20297 3373 18991 38531;38532 30893 30893 1 9606 Homo sapiens 0.024515695921763836 NTAGAQPQDDSIGGR Unmodified 1485.6808 0.68079771 1635 Q14669;A0A6Q8PGG9;Q14669-3;Q14669-2;A0A6Q8PHK0;A0A994J569;A0A994J4J0;H7C1L9;C9JLD7;A0A994J755;C9JLJ5;A0A994J752;G5E9G6;A0A994J7J0;B4DYJ6;C9JSX9;F8W9P3 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 0 0 0 2 0 1 33.709 33.766 2 6.5087E-10 7195 20230619_1881_Aki_TMTPro18x_K_F2 147.18 133.83 5493.8 4362.9 7624.1 6455.9 6693.5 7347.9 6867.8 7100.7 8943.9 6834.2 11619 7819.3 9345 8204.3 5357.9 4505.2 9548.7 9023.8 5095.3 4011.3 7546.1 6360.3 7028 7354.6 6985.4 7263.7 9082.2 6957.4 11660 7914.8 9422.2 8261.4 5744.1 4844.1 9092 8524.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8032700 20298 1635 18992 38533 30894 30894 1 9606 Homo sapiens -0.042615455747409214 NTAMDAQEALAR Unmodified 1289.6034 0.60339901 4153 Q7L4I2-2;Q7L4I2;H0YGP9;E1B6W4;Q9P068 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes no 0 0 0 3 0 1 42.612 42.678 2 1.1699E-06 10765 20230619_1882_Aki_TMTPro18x_K_F3 157.74 123.02 41191 33616 40219 38559 33195 42591 40349 38814 53664 49746 52547 47482 57275 48042 42599 51110 53731 52026 38080 30821 40827 38602 35299 42672 40689 40209 53860 49647 54115 48337 57609 49711 44235 51344 51290 49411 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53354000 20299 4153 18993 38534 30895 30895 1 9606 Homo sapiens -0.029818550445952496 NTAWPYFLPMLNR Unmodified 1621.8075 0.80751855 472 B4E054;A0A024R7X3;B3KUZ7;A0A024R7U9;Q9UI12-2;Q9UI12;G3V126;Q8TF11;H0YB41 ATP6V1H V-type proton ATPase subunit H yes no 0 0 0 7 0 1 64.55 64.58 2 0.044742 19928 20230619_1887_Aki_TMTPro18x_K_F7 64.374 38.715 13430 13458 14929 14600 13970 17694 16583 14104 18309 12824 12418 12073 14177 11502 15119 14413 14748 12460 12447 12324 15028 14695 14670 17574 16616 14630 18305 13023 13099 12278 14457 12038 15332 14332 14099 11864 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24066000 20300 472 18994 38535 30896 30896 1 9606 Homo sapiens 0.02148709116727332 NTCEAVVLGTLHPR Unmodified 1565.7984 0.79841043 2304 M0R050;B2RC50;M0R102;Q9NQT4 EXOSC5 Exosome complex component RRP46 yes no 0 0 0 8 0 1 47.107 47.155 3 1.4429E-16 12332 20230619_1888_Aki_TMTPro18x_K_F8 206.88 190.16 35153 29430 30033 29837 29664 33235 33190 33813 41837 32476 38188 33767 40352 33349 36946 34417 38309 41777 32471 26951 30927 30167 30967 33377 33531 34465 41949 32955 39416 34229 40946 34491 37690 34990 36664 39589 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223580000 20301 2304 18995 38536 30897 30897 1 9606 Homo sapiens 0.03814315760405407 NTCTSVYTK Unmodified 1072.4859 0.48590964 3758 P78527;P78527-2;B4DL41;F5GX40 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 8 0 1 39.427 39.415 2 4.4457E-12 9218 20230619_1888_Aki_TMTPro18x_K_F8 232.72 178.97 86464 41986 100860 96349 146900 162390 107450 145520 121070 81840 110950 120610 128160 114820 118250 46729 153390 126740 79858 38953 101910 93598 147870 158660 111160 147960 122090 87359 115140 120380 129850 115110 121930 52788 146240 119630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78321000 20302 3758 18996 38537 30898 30898 1 9606 Homo sapiens -0.04743387913413244 NTDEMVELR Oxidation (M) 1121.5023 0.50228798 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;A0A994J795;S4R457 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 1 0 1.33 0.471 2 1 37.9 37.92 2 0.0064642 8812 20230619_1880_Aki_TMTPro18x_K_F1 87.895 56.666 371060 299130 306430 340190 409790 410990 403360 413800 492380 413900 465990 449660 472750 412040 407950 481130 508420 468620 342580 274250 318380 341190 417260 410450 409740 422440 495290 419540 479460 453800 479370 429840 421900 481500 485210 445380 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1227000000 20303 1865 18997 38538;38539;38540 30899;30900;30901;30902 30899 1198 4 9606 Homo sapiens -0.053603067473204646 NTDEMVELR Unmodified 1105.5074 0.50737336 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;A0A994J795;S4R457 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 2 0.816 1 1 1 44.036 44.086 2 1.3281E-06 11685 20230619_1881_Aki_TMTPro18x_K_F2 191.67 126.83 1292000 1050500 1128200 1178200 1284300 1496600 1330100 1372100 1648200 1584900 1660100 1560600 1787000 1507500 1444200 1822800 1773900 1664900 1193400 962970 1162500 1183900 1324400 1486400 1348400 1415500 1661800 1590000 1707200 1584400 1803700 1573300 1494800 1816900 1693300 1583400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3350199999.9999995 20304 1865 18997 38541;38542;38543 30903;30904;30905 30905 3 9606 Homo sapiens -0.04116002884711634 NTDQASMPDNTAAQK Oxidation (M) 1606.6893 0.68931349 148;1719 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;A0A494C024;A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 1 0 3 0 1 34.409 34.47 3 1.6652E-05 7372 20230619_1882_Aki_TMTPro18x_K_F3 103.79 88.76 6516 4032.9 10146 8344.7 14702 15539 13532 15706 14333 10139 15522 13412 13685 12802 16028 5680.2 10600 11680 6043.8 3729.7 10064 8164.1 14862 15159 13741 15869 14582 10650 15781 13445 14133 12852 15900 6196.5 10202 11026 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32675000 20305 148;1719 18998 38544 30906 30906 71 1 9606 Homo sapiens -0.08976359720418259 NTDQASMPDNTAAQK Unmodified 1590.6944 0.69439886 148;1719 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;A0A494C024;A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 0 0 3 0 1 39.126 39.18 3 0.00044459 9267 20230619_1882_Aki_TMTPro18x_K_F3 87.148 75.233 28951 15967 34195 28518 43293 51306 32845 41706 39812 32968 47619 54558 40366 43067 56897 21883 47349 46895 26756 14742 34402 28052 43995 49891 33981 42998 40440 34452 48252 53951 42253 43665 56840 23856 45392 44278 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45637000 20306 148;1719 18998 38545 30907 30907 1 9606 Homo sapiens -0.0773205585778669 NTDQASMPENTVAQK Oxidation (M) 1648.7363 0.73626368 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 1 0 3 0 1 38.121 38.174 3 0.0025909 8827 20230619_1882_Aki_TMTPro18x_K_F3 69.729 49.348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20307 3549 18999 38546 30908 30908 2216 1 9606 Homo sapiens -0.06215500169264487 NTDQASMPENTVAQK Unmodified 1632.7413 0.74134906 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 0 3.5 0.5 1 1 42.178 42.231 3 1.9087E-05 10505 20230619_1883_Aki_TMTPro18x_K_F4 105.9 92.777 42423 33173 39042 38038 44207 49011 40318 39724 55812 50061 51079 52529 58705 46651 45038 46538 62722 59010 39191 30419 40008 38165 45446 48524 41359 41496 55798 50143 52953 52986 59018 48348 47016 47465 59815 55929 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74391000 20308 3549 18999 38547;38548 30909 30909 1 9606 Homo sapiens -0.049711963066556564 NTDVVATLK Unmodified 959.52876 0.52876073 4171 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7EPS6;K7ERA4 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 0 0 0 6.5 0.5 1 1 48.543 48.626 2 1.3281E-06 13303 20230619_1886_Aki_TMTPro18x_K_F6 191.67 130.69 70056 57896 57279 70837 73203 81682 69685 72844 96387 80309 104870 92108 90349 86271 78621 98084 111850 104240 64685 53111 59569 70594 74772 81573 71294 75226 96924 81176 106440 92857 92210 89767 82092 98665 106640 98970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212850000 20309 4171 19000 38549;38550 30910 30910 1 9606 Homo sapiens 0.047377502063341126 NTEAVTLNFR Unmodified 1163.5935 0.59348625 3987 Q53F02;Q9UKF6;G5E9W3;B4DQR2;Q05BZ5 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes no 0 0 0 6.5 0.5 1 1 48.085 48.168 2 0.0005593 12748 20230619_1887_Aki_TMTPro18x_K_F7 120.76 88.921 155980 130370 138890 162390 152980 192460 161080 158960 201980 180260 180630 165030 197860 163930 168590 195460 179050 174550 144120 119620 142890 161700 158300 191500 163190 165280 202590 180690 186950 168270 199970 170810 172670 194680 171180 166020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 303650000 20310 3987 19001 38551;38552 30911 30911 1 9606 Homo sapiens 0.018233250123103062 NTEDEILK Unmodified 960.47639 0.47639081 2446 Q99459;B3KY60;B4DSH1 CDC5L Cell division cycle 5-like protein yes no 0 0 0 1.5 0.5 1 1 45.379 45.419 2 0.0012021 12311 20230619_1881_Aki_TMTPro18x_K_F2 146.69 12.215 141240 104510 121180 128140 146780 157740 151130 135450 197060 164160 192880 197690 183840 154970 155880 171760 206160 200640 130370 95916 125200 127850 150650 156770 153480 140730 197840 165470 197680 197670 186620 162180 161850 173910 196730 190280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 103840000 20311 2446 19002 38553;38554 30912;30913 30913 2 9606 Homo sapiens -0.005428329272831434 NTEDLTEEWLR Unmodified 1404.6521 0.65212334 3685 P60983;G3V4P8 GMFB Glia maturation factor beta yes no 0 0 0 2 0.816 1 1 1 57.603 57.619 2 7.3733E-17 17638 20230619_1881_Aki_TMTPro18x_K_F2 232.88 187.2 276880 242040 266500 288230 244900 294150 277010 288830 323880 331250 293450 298440 341990 291420 299150 362360 328710 338390 256050 221930 271400 287400 257210 296860 278990 296550 326310 331520 304670 304250 345510 304600 306930 361480 314290 321620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 476300000 20312 3685 19003 38555;38556;38557 30914;30915 30915 2 9606 Homo sapiens -0.03401663203862881 NTEEEGLK Unmodified 918.42944 0.42944062 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 0 1.5 0.5 1 1 38.369 38.401 2 0.031594 9078 20230619_1881_Aki_TMTPro18x_K_F2 84.213 38.054 20779 13159 29806 30454 45916 49020 32682 50157 39716 29782 45065 43869 36334 39027 35396 19060 49563 40026 19256 12193 29770 29547 46037 48141 33988 50546 40231 31619 45590 43715 37378 39347 36693 20713 47219 37829 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60048000 20313 4629 19004 38558;38559 30916 30916 1 9606 Homo sapiens -0.03303692478425546 NTEIGFLQDALSK Unmodified 1434.7355 0.73545904 2038 A8K4A8;Q6PI48;Q9H9J7;Q9NVT8;A0A3B3IS01;A0A3B3IT01;A0A3B3ISK7;A0A3B3ITK9;A0A3B3ITS3;A0A3B3IS54 DARS2 Aspartate--tRNA ligase, mitochondrial yes no 0 0 0 7 0 1 62.587 62.623 3 0.00059142 18998 20230619_1887_Aki_TMTPro18x_K_F7 74.296 45.945 188050 142870 160970 196290 165360 195520 193110 203410 219110 206400 205040 204960 234320 190210 178170 258530 228980 234380 173600 131260 166070 193770 172350 197880 193920 207330 221210 208400 212260 207770 235550 200320 185420 257100 218630 222850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 793930000 20314 2038 19005 38560 30917 30917 1 9606 Homo sapiens 0.03548073243996441 NTENNDVEISETK Unmodified 1491.6689 0.66889562 4071 Q5UIP0-2;Q5UIP0;H7C2B5 RIF1 Telomere-associated protein RIF1 yes no 0 0 0 2 0 1 41.527 41.603 3 8.2832E-05 10517 20230619_1881_Aki_TMTPro18x_K_F2 105.03 91.065 55489 42396 56469 56057 60839 71432 63176 63894 79240 64387 73591 64310 68426 62650 63464 63316 75682 66197 51295 38936 57351 55685 62965 70870 64064 65794 79532 65088 75474 65265 69807 64703 65290 63790 72228 62879 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31141000 20315 4071 19006 38561 30918;30919 30918 2 9606 Homo sapiens -0.057272071085890275 NTGDADQWCPLLETLTDAEMEK Unmodified 2536.1098 0.10976932 3016 Q12824;Q12824-2;G5E975;Q9H836;A0A0G2JRV3 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes no 0 0 0 2.5 1.12 1 1 1 1 65.596 65.609 3 0.077201 21064 20230619_1881_Aki_TMTPro18x_K_F2 35.436 26.39 2338.7 2430.3 2849.6 2011.9 3186.2 2682.8 2352.9 2886.9 3898.6 2944 2923.4 3556.3 4138.1 3618 3663.8 2183.5 4932.2 4663.6 2170.1 2220.6 2850.5 2079.9 3255.8 2671.2 2470.5 2934.1 3845.3 2993.4 3102.7 3579.1 4164.8 3658 3794.9 2361 4705 4404.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16780000 20316 3016 19007 38562;38563;38564;38565 30920 30920 1 9606 Homo sapiens -0.09684117088818311 NTGIICTIGPASR Unmodified 1358.6976 0.69763375 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;A0A024R609;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;V9HWB8;P14618;A0A8V8TNX9;B4DNK4 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 2.2 0.748 1 2 2 47.143 47.205 2;3 2.9075E-10 12828 20230619_1882_Aki_TMTPro18x_K_F3 205.02 163.8 495730 409330 385440 411480 456000 525900 503660 508790 582930 648840 634570 596950 698750 607620 580540 706670 630330 642780 457570 374840 402000 417120 469890 522880 507490 524450 591890 646660 651090 608910 705550 631580 595870 704670 602700 611150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6226599999.999999 20317 370;3451 19008 38566;38567;38568;38569;38570 30921;30922;30923 30923 3 9606 Homo sapiens 0.03263283777528159 NTGQTCVCSNQFLVQR Unmodified 1910.8727 0.87271436 1585 A0A5F9ZI23;C9J8Q5;X5DQN2;X5D299;P51649;P51649-2;B4DGP6;X5DNC0;X5D8T4 ALDH5A1 Succinate-semialdehyde dehydrogenase, mitochondrial yes no 0 0 0 1 0 1 45.742 45.742 3 2.4346E-06 12594 20230619_1880_Aki_TMTPro18x_K_F1 119.46 108.18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20318 1585 19009 38571 30924 30924 1 9606 Homo sapiens -0.04628709210396664 NTGTEAPDYLATVDVDPK Unmodified 1904.9004 0.90035212 3841 V9HWG1;Q13228-3;Q13228;Q13228-4;H0Y532;C9JVL0;F2Z2W8;F8WCR4 HEL-S-134P;SELENBP1 Selenium-binding protein 1 yes no 0 0 0 3.5 0.5 1 1 57.23 57.249 3 9.9144E-11 17310 20230619_1882_Aki_TMTPro18x_K_F3 144.68 127.19 93690 74058 81120 81221 80301 97279 100980 108880 119630 103200 109630 104280 113430 104750 100850 119820 115190 122820 86518 67880 83460 81705 84147 97405 101200 110220 120350 104660 113080 105890 115130 108810 103670 120280 110130 116600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133510000 20319 3841 19010 38572;38573 30925 30925 1 9606 Homo sapiens -0.015902041975778047 NTHCSSLPHYQK Unmodified 1470.6674 0.66739625 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;P43243-2;B4DRS1;B3KM87;Q5CZA7;B4DF66;Q9H4N1;Q68E03 MATR3;DKFZp686K23100;DKFZp686K0542;DKFZp686L22104 Matrin-3 yes no 0 0 0 1.5 0.5 1 1 31.266 31.297 4 0.037319 6232 20230619_1881_Aki_TMTPro18x_K_F2 55.98 35.316 18464 48470 24484 25808 26162 45731 29644 23384 18957 26139 20813 33888 26210 21800 31796 30641 54353 43613 17355 44101 24431 28242 27222 44253 29352 25523 20045 26499 21622 33592 26878 23372 33463 31369 51713 41325 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47477000 20320 1059 19011 38574;38575 30926 30926 1 9606 Homo sapiens -0.04911074887650102 NTHENIQLSQSK Unmodified 1397.6899 0.68990583 2171 B0AZU0;Q6ZWT7 MBOAT2 Lysophospholipid acyltransferase 2 yes no 0 0 0 6 0 1 36.396 36.456 3 3.3705E-07 8124 20230619_1886_Aki_TMTPro18x_K_F6 157.5 126.93 44299 21728 44122 34373 46750 43329 46395 49986 53002 46697 63528 55095 56079 52001 49620 43912 62951 58132 40859 20041 44804 33810 48281 43288 47034 50491 53992 47630 64290 55467 57195 53315 51270 45081 60069 55081 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65821000 20321 2171 19012 38576 30927 30927 1 9606 Homo sapiens 0.006968477816144514 NTHTLLLAGVFR Unmodified 1340.7565 0.75646926 4753 Q9Y678;B3KW21;Q8WUI6;H0Y8X7 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 5.5 0.5 1 1 52.75 52.825 3 6.9047E-10 15150 20230619_1886_Aki_TMTPro18x_K_F6 156.69 115.26 109800 82122 108290 113270 110850 128330 120160 116270 184770 65303 64938 69119 70957 67168 90414 75497 76015 78624 101460 75460 110210 112000 115360 128290 122510 118290 179400 69115 72597 69980 73252 69764 90719 75963 72888 74635 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181480000 20322 4753 19013 38577;38578 30928;30929 30929 2 9606 Homo sapiens 0.09972128134154445 NTIAYDR Unmodified 851.41373 0.41373097 2407 H0YAE8;E7EUV9;Q53XR2;B3KST9;F8W8D3;Q14493;H7C4H8;B3KSC5;Q14493-2 SLBP Histone RNA hairpin-binding protein yes no 0 0 0 3.5 0.5 1 1 34.566 34.622 2 0.0078215 7357 20230619_1883_Aki_TMTPro18x_K_F4 122.19 73.432 41931 21558 42252 40998 31307 33978 28976 37030 36746 37405 55025 52663 50794 45147 42392 32453 55262 40271 38685 19931 42705 39697 33334 34935 29668 37633 37698 38235 55376 52500 51585 46135 43900 33304 52646 38221 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34598000 20323 2407 19014 38579;38580 30930 30930 1 9606 Homo sapiens -0.01791934204811696 NTIEETGNLAEQAR Unmodified 1544.7431 0.74306362 558 A0A024R972;P11047 LAMC1 Laminin subunit gamma-1 yes no 0 0 0 2 0 1 43.576 43.658 2 3.0713999999999996E-19 11517 20230619_1881_Aki_TMTPro18x_K_F2 194.12 157.54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20324 558 19015 38581 30931 30931 1 9606 Homo sapiens -0.007518192263887613 NTIQWLENELNR Unmodified 1528.7634 0.76340513 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 7 0 1 63.047 63.08 3 0.052902 19246 20230619_1887_Aki_TMTPro18x_K_F7 31.722 17.369 29457 23786 27960 29423 32078 38680 36648 34694 40888 35621 32336 34897 36681 37924 44006 47220 41767 41100 27225 21824 28607 29370 33146 38308 36801 35739 41074 35952 33814 35580 37700 39473 44514 46954 39980 39105 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156260000 20325 2727 19016 38582 30932 30932 1 9606 Homo sapiens 0.02017396224073309 NTIVTSYNR Unmodified 1066.5407 0.5407224 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;A0A7I2V614;B4DEC3;Q71UF1;B4DW08 ACO2 Aconitate hydratase, mitochondrial yes no 0 0 0 7.5 0.5 1 1 38.513 38.537 2 4.6483E-08 8891 20230619_1888_Aki_TMTPro18x_K_F8 200.32 169.02 99169 87913 83611 97592 154810 153230 137770 143430 197310 47610 53286 44629 40639 36713 94015 49401 69312 40063 91627 80553 87387 98495 154710 150530 141550 144570 191410 53451 60936 45304 44496 38780 93038 49066 66354 38258 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79705000 20326 1050 19017 38583;38584 30933 30933 1 9606 Homo sapiens 0.010113669495240174 NTKDEFEER Unmodified 1166.5204 0.52038089 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 1 2 0.816 1 1 1 36.219 36.257 3 0.0012963 8174 20230619_1881_Aki_TMTPro18x_K_F2 94.82 69.965 236800 185700 236030 228920 279630 285520 255990 250820 337980 313510 332870 309490 328580 275150 270040 263910 346810 254660 218900 170400 240400 228400 286320 283710 262020 260270 339460 313480 341310 313090 332720 284370 279780 264980 330440 242310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181420000 20327 817 19018 38585;38586;38587 30934;30935 30935 2 9606 Homo sapiens -0.05621848500959459 NTLANSCGTGIR Unmodified 1262.6037 0.60373336 441 A0A024R7E0;Q96RE7;A0A024R8I0;Q96BF6 BTBD14B;NACC1;BTBD14A;NACC2 Nucleus accumbens-associated protein 1;Nucleus accumbens-associated protein 2 yes no 0 0 0 8 0 1 36.828 36.813 2 0.00024235 8194 20230619_1888_Aki_TMTPro18x_K_F8 115.29 95.525 24631 17363 21686 23629 25077 32510 30843 27911 38451 26632 30722 27547 31517 25056 20387 34860 41884 28539 22733 15957 22350 23454 25989 32073 30976 28798 38384 27043 31879 27874 31630 26444 22187 34477 39774 27222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28007000 20328 441 19019 38588 30936 30936 1 9606 Homo sapiens -0.01706435324740596 NTLFNLSNFLDK Unmodified 1424.73 0.72997974 348;2874 B5BU72;A0A024R5L7;A8K5U9;A0A024R5P1;Q13492-3;Q13492-2;Q13492-5;Q13492;Q13492-4;E9PI56;E9PKP6;E9PLJ8;E5RFU0;E5RHK9;E5RFC6;E5RK51;E5RIJ5;E5RGY9;E9PDG8;H0UI15;O60641-3;O60641-4;O60641 PICALM;SNAP91 Phosphatidylinositol-binding clathrin assembly protein;Clathrin coat assembly protein AP180 no no 0 0 0 3.5 0.5 1 1 64.451 64.471 3 9.153E-08 20319 20230619_1882_Aki_TMTPro18x_K_F3 166.62 139.95 129770 114430 118510 107230 74367 87591 93109 96651 120930 129940 137730 126720 131830 124000 142400 148440 137770 159910 119970 104700 120570 108770 81368 90365 93770 99027 122310 129430 140210 128750 135310 129270 144400 149390 132010 151680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 188120000 20329 348;2874 19020 38589;38590 30937 30937 1 9606 Homo sapiens 0.03460394452190485 NTLIQFEDFGNHNAFR Unmodified 1921.9071 0.90710925 1317 A0A1W2PPH1;A0A1W2PQH3;P23368;A0A1W2PR68;A0A1W2PQT3;A0A1W2PQY8;A0A1W2PQ37;A0A1W2PQF8;P23368-2 ME2 NAD-dependent malic enzyme, mitochondrial yes no 0 0 0 8 0 1 57.271 57.323 3 1.0953E-19 16689 20230619_1888_Aki_TMTPro18x_K_F8 211.9 197.65 47859 35660 47427 51890 42817 51090 53803 56288 60093 56590 47665 51884 59362 51084 51210 62348 54298 65521 44226 32788 48180 51049 45165 51814 53812 57146 60393 57034 50034 52856 59839 53329 52453 62614 51999 62158 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173970000 20330 1317 19021 38591 30938 30938 1 9606 Homo sapiens -0.01696801735624831 NTLLIAGLQAR Unmodified 1168.6928 0.69280637 619 A0A0C4DGS1;A0A024RAD5;P39656;P39656-3;P39656-2 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 0 4.33 0.471 2 1 54.977 55.008 2;3 5.4025E-05 16224 20230619_1883_Aki_TMTPro18x_K_F4 141.91 98.911 405730 387350 374950 408860 393000 453510 445150 474280 578800 398530 383560 369600 412670 364520 444390 429740 413080 384530 375330 354680 383970 411940 408620 455750 449850 480940 573800 406300 404030 376560 421920 379530 449500 428380 395330 365810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 467810000 20331 619 19022 38592;38593;38594 30939;30940;30941 30940 3 9606 Homo sapiens 0.11520767697106749 NTLQLHR Unmodified 880.4879 0.48789897 210 A0A024R2Q4;P61313;B4DLP4;E7ERA2 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 0 0 0 4.5 3.5 1 1 32.062 32.064 2 0.020601 6814 20230619_1880_Aki_TMTPro18x_K_F1 104.37 26.625 90595 75629 80781 78267 124540 114950 100770 106640 131280 33454 33473 28869 31968 24374 59069 32954 44823 28018 83706 69270 83489 79354 125160 113330 103850 107520 127830 37775 38910 29450 33989 25754 58649 32788 42908 26726 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41828000 20332 210 19023 38595;38596 30942;30943 30942 2 9606 Homo sapiens 0.04287453677375197 NTLTNIAMRPGLEGYALPR Oxidation (M) 2102.0943 0.094258096 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B1AHB2;B1AHA9 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 1 1 4 0 1 53.074 53.093 3 0.023188 15401 20230619_1883_Aki_TMTPro18x_K_F4 53.667 41.041 53268 43299 45216 51724 52254 54927 59996 63074 68503 64477 65616 61509 73874 60493 62865 68937 59584 62021 49192 39714 46751 51597 53930 55495 60302 63890 69193 64998 67787 62569 74583 62885 63973 68746 57058 58972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251150000 20333 2188 19024 38597 30944 30944 1364 1 9606 Homo sapiens 0.08729473757603046 NTLTNIAMRPGLEGYALPR Unmodified 2086.0993 0.099343474 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B1AHB2;B1AHA9 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 1 4.5 0.5 1 1 56.188 56.223 3 3.8012999999999997E-32 16794 20230619_1883_Aki_TMTPro18x_K_F4 241.65 206.72 61499 56035 61282 65162 54328 66619 71258 67783 83450 79410 75281 70845 75073 63108 71805 79776 78594 85926 56905 51361 62205 65093 57496 67279 71235 69485 83994 79380 77588 72057 76476 66264 73496 80216 75183 81521 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 375460000 20334 2188 19024 38598;38599 30945 30945 1 9606 Homo sapiens 0.09973777620189139 NTMEALPACLLR Unmodified 1387.6952 0.69519091 1407 B5BU32;A0A384MDV9;K7ERV3;P04183;B5BUF9;A0A024R8N6;K7ES52;K7ERJ1 TK1 Thymidine kinase;Thymidine kinase, cytosolic yes no 0 0 0 1 0 1 58.14 58.14 2 0.0054815 17735 20230619_1880_Aki_TMTPro18x_K_F1 106 76.019 54812 49400 51851 56153 36310 58857 64444 59494 67439 64234 49321 46509 61960 47544 48441 63143 55781 47965 50693 45272 52748 56205 39843 59287 63417 60866 67828 64135 51988 48065 62173 49852 49979 62314 53246 45747 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34906000 20335 1407 19025 38600 30946 30946 1 9606 Homo sapiens 0.016851120482215265 NTNAGAPPGTAYQSPLPLSR Unmodified 2011.0123 0.012302606 2470 Q02218;Q02218-2;E9PDF2;B4DF00;E9PCR7;Q02218-3;A0A140VJQ5;C9J4G7 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 2 0 1 49.634 49.693 3 5.8341E-08 14268 20230619_1881_Aki_TMTPro18x_K_F2 109.65 85.459 35316 33905 34344 44532 38706 38664 41190 45145 45771 40285 38395 42720 48361 40853 35861 47268 48195 47197 32683 31110 35092 44012 39896 39697 41534 45546 46084 41049 40198 43196 48461 42543 37427 47362 45986 44833 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33717000 20336 2470 19026 38601 30947 30947 1 9606 Homo sapiens 0.04723694670133227 NTNDANSCQIIIPQNQVNR Unmodified 2198.0498 0.049827099 1080;2533 A0A0S2Z3X8;P31150;B4DHX4;B4E070;Q6IAT1;B4DLV7;P50395;P50395-2;Q8TB95;B3KVE3;Q5SX91 GDI1;GDI2 Rab GDP dissociation inhibitor alpha;Rab GDP dissociation inhibitor beta no no 0 0 0 6.33 0.471 2 1 45.241 45.329 3 2.8291E-42 11933 20230619_1886_Aki_TMTPro18x_K_F6 201.04 184.36 81167 39156 80067 67948 67394 67703 78524 65821 80648 76799 104140 102670 105750 75875 91479 103090 89959 98744 74853 36166 81150 66246 71241 68420 78624 67732 82919 77808 105790 102200 107080 80621 93259 102890 86147 93801 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2437200000 20337 1080;2533 19027 38602;38603;38604 30948;30949;30950 30949 3 9606 Homo sapiens -0.0012758212656081014 NTNDANSCQIIIPQNQVNRK Unmodified 2326.1448 0.14479012 1080;2533 A0A0S2Z3X8;P31150;B4DHX4;B4E070;Q6IAT1;B4DLV7;P50395;P50395-2;Q8TB95;B3KVE3;Q5SX91 GDI1;GDI2 Rab GDP dissociation inhibitor alpha;Rab GDP dissociation inhibitor beta no no 0 0 1 1 0 1 43.468 43.468 3 6.0469E-16 11656 20230619_1880_Aki_TMTPro18x_K_F1 149.95 141.96 11861 12149 11497 10743 10800 11081 10395 12923 11014 13786 15142 18016 18875 15514 14084 25978 23727 29340 10982 11106 11691 10986 11257 11235 10541 13092 11367 14005 15521 18030 18925 16645 15006 26079 22647 27811 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55084000 20338 1080;2533 19028 38605 30951 30951 1 9606 Homo sapiens 0.034763513446705474 NTNEEDDEVR Unmodified 1219.4953 0.49528835 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2 MRE11A Double-strand break repair protein MRE11A yes no 0 0 0 1 0 1 29.569 29.569 2 0.00031791 5821 20230619_1880_Aki_TMTPro18x_K_F1 131.82 111.19 6887.8 2367.5 7463.1 8638.1 10191 12859 9462.4 11151 9368.2 5702.5 11486 14262 8340.6 11595 9343.9 4080.6 13290 11635 6350.3 2226.1 7584.4 8246.7 10359 12622 9585.7 11361 9609.7 6319.7 11568 13983 8693.2 11634 9670.6 4665.6 12666 10977 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5594400 20339 229 19029 38606 30952 30952 1 9606 Homo sapiens -0.10567948094194435 NTNEEDDEVREAMTR Oxidation (M) 1823.7592 0.75918397 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2 MRE11A Double-strand break repair protein MRE11A yes no 0 1 1 1 0 1 32.847 32.847 3 0.0012494 7116 20230619_1880_Aki_TMTPro18x_K_F1 80.387 70.048 12843 11130 10388 11947 17582 16416 13996 16039 18563 13999 20030 17227 14716 13712 15799 16833 17796 15694 11861 10196 10871 12059 17588 16262 14462 16347 18686 14362 20229 17242 15248 14415 16162 16801 16993 14926 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35285000 20340 229 19030 38607 30953 30953 141 1 9606 Homo sapiens -0.1197452584247003 NTNEEDDEVREAMTR Unmodified 1807.7643 0.76426934 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2 MRE11A Double-strand break repair protein MRE11A yes no 0 0 1 1 0 1 40.04 40.04 3 8.531299999999999E-19 10116 20230619_1880_Aki_TMTPro18x_K_F1 218.78 200.64 90708 73010 84214 82109 76627 88327 86522 80286 82641 94906 92356 86005 99672 79287 103260 103820 101260 88255 83817 66929 85960 82289 80479 88680 86578 82987 84875 94843 94615 87526 101620 83317 104820 103070 96810 84038 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138830000 20341 229 19030 38608 30954 30954 1 9606 Homo sapiens -0.10730221979838461 NTNPNFVR Unmodified 960.47773 0.47772821 148;3549 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH9;MYH10 Myosin-9;Myosin-10 no no 0 0 0 7 0.816 1 1 1 35.464 35.502 2 0.0038014 7701 20230619_1888_Aki_TMTPro18x_K_F8 118.32 70.75 321220 231340 292430 297130 368630 435800 370330 400690 506210 368060 419540 364550 387180 313200 367770 335410 464180 374510 296580 212440 300690 296460 377450 429190 377430 410630 504040 373910 432680 368660 395290 326110 379400 339030 442570 355620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 650330000 20342 148;3549 19031 38609;38610;38611 30955;30956 30956 2 9606 Homo sapiens -0.0040915404786119325 NTNQDIYR Unmodified 1022.4781 0.47812215 4120 Q6P392;Q8WUA2;Q9H287;Q9P1R3;Q96AL2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes no 0 0 0 3 0 1 33.182 33.253 2 0.003949 6859 20230619_1882_Aki_TMTPro18x_K_F3 117.89 88.317 22354 12761 25344 23590 33433 33488 28561 32416 35856 17788 25992 18318 19742 18385 27567 13346 26287 17286 20654 11785 25603 23051 33932 33071 29309 32778 35650 18810 26820 18606 20732 18696 27740 13765 25101 16410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12176000 20343 4120 19032 38612 30957 30957 1 9606 Homo sapiens -0.032217791186667455 NTPAFFAER Unmodified 1051.5087 0.50869399 4024 Q6ICS0;Q59EP1;B4DPJ2;Q5T0G8;P50995-2;P50995;B7Z6L0;H0Y6E1 ANXA11 Annexin;Annexin A11 yes no 0 0 0 6 0.816 1 1 1 47.526 47.608 2 0.0017449 12482 20230619_1887_Aki_TMTPro18x_K_F7 129.28 84.514 462450 397170 418610 457320 466970 502570 558490 567850 661400 513570 440840 419010 532380 404110 473690 590650 547870 460020 427410 364090 429920 457670 483760 506330 560740 573970 658970 519290 466580 429540 537550 427320 487410 582890 522870 438630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 304330000 20344 4024 19033 38613;38614;38615 30958;30959 30959 2 9606 Homo sapiens -0.015000007336311683 NTPCSENKLDIQEK Unmodified 1674.7883 0.78829925 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5;E7EWK3 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 0 1 5 0 1 44.153 44.232 3 1.1881E-06 11306 20230619_1885_Aki_TMTPro18x_K_F5 127.79 101.67 62246 53502 59829 50440 61027 56637 70269 65943 57587 72651 69454 48903 63404 43955 63860 49975 43482 28431 57557 48961 60931 51354 63414 57083 69939 66881 59928 72289 70317 50584 64811 45855 63724 48985 41696 27288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35740000 20345 4503 19034 38616 30960 30960 1 9606 Homo sapiens -0.022103367555246223 NTPENLHEMAK Oxidation (M) 1298.5925 0.59249998 484 A0A024R811;Q53H82 LACTB2 Beta-lactamase-like protein 2 yes no 0 1 0 3 0 1 33.841 33.907 3 0.0019824 7146 20230619_1882_Aki_TMTPro18x_K_F3 75.479 58.111 17377 12195 16331 19137 19712 19570 19650 21521 22354 20498 26439 26525 21682 22440 22858 22914 24846 25254 16045 11226 16742 18752 20192 19797 19907 21822 22766 20952 26728 26519 22361 23287 23334 23154 23756 23960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22734000 20346 484 19035 38617 30961 30961 298 1 9606 Homo sapiens -0.04485257418900801 NTPHFNRK Unmodified 1012.5203 0.52026173 3896 Q14684;Q14684-2;Q6PJM8 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 1 3.5 0.5 1 1 29.941 30.021 4 0.023424 5637 20230619_1882_Aki_TMTPro18x_K_F3 69.598 46.912 114300 75175 102790 104940 141000 148900 113880 137930 164510 66109 73935 70597 71268 61170 76114 56164 89686 59683 105470 69125 105940 104080 142780 146940 117950 139650 160820 70979 79987 71192 73119 63145 77933 56800 85472 56760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18456000 20347 3896 19036 38618;38619 30962;30963 30962 2 9606 Homo sapiens 0.01450241080374326 NTPLCDSFVFR Unmodified 1354.634 0.63397086 284 B3KN05;A0A7P0TA76;B2RBE0;A0A024R487;O95573;A0A7P0TBB1;B3KMA6;A0A7P0T8L6;A0A7P0TB52;A0A7P0T905 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes no 0 0 0 8 0 1 57.017 57.068 2 2.5587E-09 16563 20230619_1888_Aki_TMTPro18x_K_F8 191.54 162.17 97359 87116 84966 89483 51604 65499 79917 77392 86587 102790 72758 69551 102330 76802 78029 115280 96643 90603 89983 79767 86870 89932 57099 68368 79179 78948 87425 101480 76566 72399 102310 81066 81003 113730 92245 86339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89110000 20348 284 19037 38620 30964 30964 1 9606 Homo sapiens -0.0291607665956235 NTPLQDK Acetyl (Protein N-term) 856.42905 0.42904669 917 A0A096ZUC4 CFTR yes yes 1 0 0 1 0 1 31.111 31.111 2 0.0050887 6425 20230619_1880_Aki_TMTPro18x_K_F1 75.189 71.255 44129 38123 44414 42173 37637 38270 37875 43251 43282 46407 46656 51673 50845 44933 50469 52646 50556 57828 40821 34934 44964 42239 39616 39135 38390 43921 43952 46873 47938 51978 51751 46978 51346 53066 48421 54844 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42158000 20349 917 19038 38621 30965 30965 1 9606 Homo sapiens -0.004910674076199939 NTPSEPIHCIVWAK Unmodified 1650.8188 0.81881152 1535 B3KMZ6;B2RDF5;A0A3R5W301;Q9UBT2;Q9UBT2-2;K7EPL2 UBA2 SUMO-activating enzyme subunit 2 yes no 0 0 0 4.5 3.5 1 1 50.899 50.937 3 3.9842E-12 14732 20230619_1880_Aki_TMTPro18x_K_F1 161.84 130.01 160190 141390 162710 160540 146490 171590 172010 184070 171920 192210 181090 169100 194050 164030 164290 196350 191550 200910 148220 129580 164830 160790 154160 172960 172060 187330 175660 193040 185840 172600 196230 171130 169270 196960 183080 190740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84103000 20350 1535 19039 38622;38623 30966;30967 30966 2 9606 Homo sapiens 0.019434864201912205 NTPSFLIACNK Unmodified 1263.6282 0.6281572 4014 Q549N5;Q9Y5M8;H7C4H2 SRPRB Signal recognition particle receptor subunit beta yes no 0 0 0 3 0 1 53.872 53.925 2 9.8708E-12 15889 20230619_1882_Aki_TMTPro18x_K_F3 225.01 194.44 64712 56963 50553 55122 44305 59160 67112 63753 83987 72464 68350 53960 73508 57965 64940 86634 75420 73793 59757 52135 52489 55918 47264 59630 66833 65035 83945 72241 70985 55852 74441 61201 66886 85807 72048 70231 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122030000 20351 4014 19040 38624 30968 30968 1 9606 Homo sapiens 0.006888248287850729 NTPSPFIETFTEDDEASR Unmodified 2054.9069 0.90689406 1371 B4E2I4;E1CEI4;Q14TF0;A0A2R8YEL6;P48506;A0A0C4DGB2 GCLC Glutamate--cysteine ligase catalytic subunit yes no 0 0 0 2 0 1 59.085 59.099 3 9.2931E-10 18247 20230619_1881_Aki_TMTPro18x_K_F2 136.43 116.33 26987 25188 31740 27711 24529 33169 29957 27854 31808 25690 28526 21017 27570 25177 28742 31600 29658 35027 25012 23073 31721 27865 26228 32997 29959 28770 32142 25962 29338 21739 28239 26180 29275 31831 28405 33213 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22102000 20352 1371 19041 38625 30969 30969 1 9606 Homo sapiens -0.07836311036817278 NTPYQAPVR Unmodified 1044.5352 0.53524309 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 7.67 0.471 1 2 35.93 35.946 2 0.0019985 7641 20230619_1887_Aki_TMTPro18x_K_F7 110.55 27.99 73884 50536 68807 74218 96053 114660 90719 84544 139020 52731 56413 46795 51163 41098 54405 42726 60544 45736 68209 46488 70779 73474 97645 112120 93159 87596 135310 55032 61468 47625 52571 42693 55532 43123 57766 43463 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114640000 20353 68 19042 38626;38627;38628 30970;30971 30970 2 9606 Homo sapiens 0.014756881576886371 NTQAAEALVK Unmodified 1043.5611 0.56112349 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A494C1D7;Q03001-9;B4DSS9;Q03001-3;Q6P0N6 DST Dystonin yes no 0 0 0 6 0 1 45.501 45.587 3 0.0079665 11932 20230619_1886_Aki_TMTPro18x_K_F6 78.692 47.618 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20354 1693 19043 38629 30972 30972 1 9606 Homo sapiens 0.04108537609317864 NTQVYLK Unmodified 864.47052 0.47051757 4745 Q9Y5B6-2;Q9Y5B6;B3KY25;B3KSC0;Q8N2J1 PAXBP1 PAX3- and PAX7-binding protein 1 yes no 0 0 0 1 0 1 44.424 44.424 2 0.052567 12066 20230619_1880_Aki_TMTPro18x_K_F1 85.064 48.868 35698 29113 30648 32769 42635 44830 35931 43098 52517 30109 35227 30663 30670 24169 36835 27594 36322 30944 32970 26687 31740 32959 43185 44383 37130 43768 51799 31180 36734 30906 31735 25342 37265 27893 34721 29375 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14292000 20355 4745 19044 38630 30973 30973 1 9606 Homo sapiens 0.032861133517030794 NTSDVISAAK Unmodified 1004.5138 0.51383895 1411 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;P35221-3;B3KSR8;E5RGY7 CTNNA1 Catenin alpha-1 yes no 0 0 0 6 0 1 43.727 43.819 2 1.572E-09 11158 20230619_1886_Aki_TMTPro18x_K_F6 205.53 137.32 87432 50176 82242 74585 119480 121930 103580 109200 121920 111710 116470 100950 133770 88999 87596 84145 145300 106130 80655 46204 84481 73923 120690 119390 105920 112410 122980 112460 120340 102560 133660 92117 93021 85890 138190 100720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70133000 20356 1411 19045 38631 30974 30974 1 9606 Homo sapiens 0.011762583383415404 NTSEQDQPMGGWEMIR 2 Oxidation (M) 1909.7935 0.79346098 3482 P20700;B4DZT3 LMNB1 Lamin-B1 yes no 0 2 0 2.5 0.5 1 1 44.094 44.17 3 0.018019 11444 20230619_1882_Aki_TMTPro18x_K_F3 49.493 39.572 36472 35840 37689 42561 48016 46518 48894 44207 50079 49007 55661 57424 60821 48083 52796 48268 60078 55286 33777 32850 38367 42481 49015 46711 49273 45470 51180 49527 57083 57576 61503 49939 54199 48918 57379 52454 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97824000 20357 3482 19046 38632;38633 30975 30975 2132;2133 1 9606 Homo sapiens -0.1250440095520844 NTSEQDQPMGGWEMIR Unmodified 1877.8036 0.80363174 3482 P20700;B4DZT3 LMNB1 Lamin-B1 yes no 0 0 0 3.67 0.471 1 2 54.67 54.701 2;3 2.256E-14 16230 20230619_1882_Aki_TMTPro18x_K_F3 170.78 148.57 57877 47411 42241 50066 38700 61978 38008 40167 58113 48331 42627 43549 45266 37984 46733 46272 45749 36144 53398 43436 44214 50489 40701 61240 38996 42763 57441 48311 44590 44223 46188 39793 47434 45811 43715 34472 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 538650000 20358 3482 19046 38634;38635;38636 30976;30977 30976 2 9606 Homo sapiens -0.1001579322996804 NTSFAYPAIR Unmodified 1138.5771 0.57710791 3623 P51398-2;P51398-3;P51398;V9GYL9;V9GZ03 DAP3 28S ribosomal protein S29, mitochondrial yes no 0 0 0 2 0 1 48.338 48.408 2 0.0087617 13696 20230619_1881_Aki_TMTPro18x_K_F2 83.499 59.544 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20359 3623 19047 38637 30978 30978 1 9606 Homo sapiens 0.013362438462081627 NTSLPPLWSPEAER Unmodified 1595.7944 0.79437091 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 6 0 1 56.747 56.819 2 8.7311E-05 16808 20230619_1886_Aki_TMTPro18x_K_F6 132.99 68.503 24277 21896 22830 25319 20357 26488 23948 25015 27668 28422 30836 27243 31833 29244 27872 30624 32558 29421 22452 20069 23293 25306 21477 26657 24066 25747 28104 28511 31505 27794 32285 30164 28684 30682 31085 27969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27857000 20360 68 19048 38638 30979 30979 1 9606 Homo sapiens 0.02030549538358173 NTTGSTIAEIR Unmodified 1161.599 0.59896556 862 Q9ULU4-19;Q9ULU4-18;H7C4X9;A0A087WYS3;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-12;Q9ULU4-14;Q9ULU4-21;Q9ULU4-8;Q9ULU4-23;Q9ULU4-15;Q9ULU4-17;Q9ULU4-6;Q9ULU4-3;Q9ULU4-2;Q9ULU4-4 ZMYND8 Protein kinase C-binding protein 1 yes no 0 0 0 4 0 1 39.763 39.805 2 4.1522E-05 9484 20230619_1883_Aki_TMTPro18x_K_F4 143 102.93 24130 21340 23141 25976 30067 30976 31537 32026 40891 33668 38843 37268 33024 34374 34786 38026 45072 41446 22316 19571 23713 25919 30720 30973 31992 32682 41013 34064 39685 37586 34031 35721 35926 38338 43000 39343 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28070000 20361 862 19049 38639 30980 30980 1 9606 Homo sapiens 0.024630038041323132 NTTGVTEEALK Unmodified 1161.5877 0.58773217 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 3.5 0.5 1 1 44.219 44.278 2 1.7223E-16 11520 20230619_1882_Aki_TMTPro18x_K_F3 251.43 144.83 179380 153500 170110 166490 198340 207780 198340 200820 272830 233480 276130 283720 258110 224460 212630 276400 299730 272050 165840 140640 173970 167700 203840 206900 202280 206480 273680 235810 282320 283760 261960 236150 222160 276500 285750 258540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 261310000 20362 1022;3868 19050 38640;38641 30981;30982 30981 2 9606 Homo sapiens 0.013401817099975233 NTTIPTK Unmodified 773.42832 0.42831841 1488;3430 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;B7Z4T3;B7Z1V7;A1XP52;P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;P11142-2;B4E1Q1;A8K7Q2;Q96BE0;E9PS65;P54652;A0A024R6B5;A0A384MDT7;B3KUS2 HSPA9;HEL-S-124m;HSPA8;HEL-S-72p;HSPA2 Stress-70 protein, mitochondrial;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 0 0 0 5.33 3.09 1 1 1 40.051 40.069 2 0.0066441 9291 20230619_1887_Aki_TMTPro18x_K_F7 138.78 55.032 448030 230250 588770 573150 750830 766730 593960 788910 529030 472830 773830 788350 586860 660960 710840 252530 784880 675740 414400 213870 588600 552630 761730 760440 606940 795370 551830 504090 774640 781080 611730 664080 722070 285720 749500 637730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 709720000 20363 1488;3430 19051 38642;38643;38644 30983;30984;30985 30984 3 9606 Homo sapiens 0.032541379433382644 NTVANSPQTLLAGMNK Oxidation (M) 1673.8407 0.84066917 3692 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 1 0 2 0 1 49.618 49.677 3 5.9733E-06 14258 20230619_1881_Aki_TMTPro18x_K_F2 107.13 93.382 207700 160900 158800 200240 210520 225330 203160 219080 249720 203030 212060 183200 198790 162190 196400 230160 217630 201230 191620 147670 166400 199270 214520 225810 206680 223750 250150 205530 218570 186390 203190 171600 201110 228470 207910 191490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99708000 20364 3692 19052 38645 30986;30987 30987 2381 2 9606 Homo sapiens 0.03070246378115371 NTVELLVEDK Unmodified 1158.6132 0.61321864 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4;A0A804HJC2 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 3 0 1 57.702 57.735 3 0.052264 17488 20230619_1882_Aki_TMTPro18x_K_F3 55.452 22.846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20365 3299 19053 38646 30988 30988 1 9606 Homo sapiens 0.040256562324202605 NTVLATWQPYTTSK Unmodified 1608.8148 0.814772 4468 Q9BY44-3;Q9BY44;F8WAE5;C9IZE1;H7C5Q3 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 3 0 1 57.809 57.84 3 1.0893E-08 17512 20230619_1882_Aki_TMTPro18x_K_F3 153.09 139.43 58613 52729 50400 55826 52629 58156 57367 65631 68708 69830 66500 60149 81339 58965 66096 69922 71369 71558 54168 48292 51946 56187 54653 58824 57942 66606 69307 70043 68929 61486 81748 61509 67788 70172 68235 67948 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55256000 20366 4468 19054 38647 30989 30989 1 9606 Homo sapiens 0.034717201981266044 NTVLCNVVEQFLQADLAR Unmodified 2089.0626 0.062623617 3885 Q59GW5;Q14258;A0A3B3IUA7;I3L2W4 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes no 0 0 0 2 0 1 67.1 67.107 3 0.0071421 21672 20230619_1881_Aki_TMTPro18x_K_F2 64.249 55.317 2280.7 2000.7 2827 1839.9 3768.9 3051.6 2867.4 4352.2 3258.4 1788.3 2896.4 1710.3 2130.9 1652.1 2525.8 2292.3 1609.4 1838.9 2114 1830.4 2832.8 1892.7 3806.1 3026.6 2959.9 4280.1 3276.8 1942 2947.8 1746.5 2215.6 1740.1 2510 2268.9 1550.3 1750.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4820700 20367 3885 19055 38648 30990 30990 1 9606 Homo sapiens 0.06165481003608875 NTVLQQHLETLR Unmodified 1450.7892 0.78922595 2543 B4DMG1;Q9NP66;H0YKL0 HMG20A High mobility group protein 20A yes no 0 0 0 8 0 1 44.982 45.01 3 4.1751E-13 11470 20230619_1888_Aki_TMTPro18x_K_F8 197.38 169.61 37409 23738 28691 35504 30708 35752 38285 36516 43699 38009 40727 40789 45297 36414 38947 43277 41759 41861 34476 21849 29948 34872 31981 36132 38317 37303 44075 38428 42124 41143 45770 38076 39895 43291 39929 39774 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101100000 20368 2543 19056 38649 30991 30991 1 9606 Homo sapiens 0.08186290466369428 NTVQGFK Unmodified 792.413 0.41300269 3544 P34932;B4DH02;V9HW33;Q59GF8;O14992;Q7KYN0;P34932-2 HSPA4;HEL-S-5a;HS24/p52;HS24/P52 Heat shock 70 kDa protein 4 yes no 0 0 0 4.5 3.5 1 1 42.212 42.214 2 0.0052094 11041 20230619_1880_Aki_TMTPro18x_K_F1 142.64 35.051 503550 290750 534690 583570 680170 735150 594850 660590 728240 610950 848020 836430 800030 704190 684390 403790 903840 784470 465000 268850 543000 566640 692680 729640 609160 678540 738480 627180 862060 833770 812740 715230 708380 432980 861840 741500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 274340000 20369 3544 19057 38650;38651 30992;30993 30992 2 9606 Homo sapiens 0.008492711461599356 NTVSQSISGDPEIDK Unmodified 1588.758 0.75804498 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;Q9BY44-2 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 3 0 1 47.364 47.443 3 1.1046E-07 12986 20230619_1882_Aki_TMTPro18x_K_F3 128.74 108.9 57767 44294 44565 48898 52368 60054 53090 55255 75065 70160 73924 78997 75693 67142 66129 90351 91674 86638 53294 40606 46513 49161 53891 59780 54164 57164 75178 70395 75995 79406 76795 70851 68955 90138 87431 82347 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73318000 20370 4468 19058 38652 30994 30994 1 9606 Homo sapiens -0.012783721490222888 NTVSQSISGDPEIDKK Unmodified 1716.853 0.853008 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;Q9BY44-2 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 1 4.5 0.5 1 1 45.211 45.272 3 4.0047E-10 11742 20230619_1885_Aki_TMTPro18x_K_F5 145.54 130.34 241210 207690 209750 222530 220700 241130 258270 249970 300300 313480 304490 264600 326250 249420 275170 312380 292390 257590 222870 190270 215950 223870 229480 242730 259500 256420 303850 311910 312840 270440 329650 261210 281850 309770 279350 245370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 282860000 20371 4468 19059 38653;38654 30995;30996 30996 2 9606 Homo sapiens 0.023255613221408566 NTVVATGGYGR Unmodified 1093.5516 0.55162144 21 A0A024QZ30;P31040;P31040-2;D6RFM5;B3KT34;Q0QF12;B4DYN5;A0A494C1T6 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 5.33 3.09 1 1 1 37.242 37.259 2 8.0224E-12 8353 20230619_1888_Aki_TMTPro18x_K_F8 198.93 166.09 161350 131140 145360 165630 216630 204680 190500 189100 238540 210410 242680 232770 260730 215010 200540 249380 272650 236340 149060 120350 150150 164910 218510 203740 195030 194810 240410 212280 249430 234790 262680 224180 209210 249200 259920 224750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 276160000 20372 21 19060 38655;38656;38657 30997;30998;30999 30999 3 9606 Homo sapiens 0.008587693238041538 NTVVPTK Unmodified 757.4334 0.43340378 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 8 0 1 40.494 40.486 3 0.041125 9705 20230619_1888_Aki_TMTPro18x_K_F8 64.265 25.243 28360 21488 27237 30338 31306 41691 31814 34983 48266 25443 35238 35862 34144 28331 30824 31574 45000 41239 26203 19749 27851 30042 32300 41108 32550 35939 47625 26590 36715 35694 34744 29656 32185 32214 42892 39080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35838000 20373 3429 19061 38658 31000 31000 1 9606 Homo sapiens 0.04498441805958464 NTYQSAMGK Unmodified 998.44913 0.4491302 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 0 8 0 1 40.874 40.866 2 8.6701E-05 9833 20230619_1888_Aki_TMTPro18x_K_F8 127.76 101.09 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20374 2484 19062 38659 31001 31001 1 9606 Homo sapiens -0.05015639739303879 NTYVCSER Unmodified 1027.4393 0.4392938 1646 P27448-7;P27448;A0A7I2V2N8;A0A7I2V639;A0A7I2V3I9;A0A7I2V5G3;A0A7I2V4K8;A0A7I2V549;A0A7I2V3B9;A0A7I2V4G7;A0A7I2V2I9;H0YJI9;H0YNV4;A0A7I2V3K2;P27448-2;J3KNR0;P27448-4;A0A7I2V2U9;P27448-3;P27448-6;A0A7I2V602;A0A7I2V409;A0A7I2YQF4;H0YKP9;A0A7I2V2E3;A0A7I2V4T2;A0A7I2V3P5;A0A7I2V3C6;A0A7I2YQF7;A2SY06;Q86U11;B4DKN1;P27448-8;H0YIY6 MARK3 MAP/microtubule affinity-regulating kinase 3 yes no 0 0 0 3.5 0.5 1 1 32.332 32.402 2 0.017245 6524 20230619_1882_Aki_TMTPro18x_K_F3 83.998 63.097 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20375 1646 19063 38660;38661 31002;31003 31002 2 9606 Homo sapiens -0.07332827744698989 NTYYASIAK Unmodified 1029.5131 0.51311067 1063 P11310-2;P11310;Q5HYG7;Q5T4U5;A0A0S2Z366;B4DWX6;B7Z9I1;F6YB23;A0A7P0T932;A0A7P0T8G6;B4DJE7;A0A7P0TB55;B4DVB1;B4DVE0 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 1 0 1 47.162 47.162 2 0.0052998 13183 20230619_1880_Aki_TMTPro18x_K_F1 86.898 56.644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20376 1063 19064 38662 31004 31004 1 9606 Homo sapiens -0.00046536310719602625 NVADDTRSEDLR Unmodified 1389.6484 0.64843495 1114 Q5JRI1;Q53GD7;A0A0S2Z504;O75494-5;O75494-4;O75494-6;O75494-3;O75494-2;O75494;Q6IQ42 SRSF10;FUSIP1 Serine/arginine-rich splicing factor 10 yes no 0 0 1 1.5 0.5 1 1 33.477 33.506 3 2.8334E-07 7349 20230619_1880_Aki_TMTPro18x_K_F1 162.26 122.6 90349 74510 81512 81220 115800 98001 106590 105400 128960 104410 116660 99920 107410 90549 101300 113160 124280 108270 83479 68279 84020 81747 117130 98098 108660 107110 129550 105480 119750 101420 109650 94914 104440 113050 118570 102940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181130000 20377 1114 19065 38663;38664 31005;31006 31005 2 9606 Homo sapiens -0.030803329776972532 NVADDTRSEDLRR Unmodified 1545.7495 0.74954598 1114 Q5JRI1;Q53GD7;A0A0S2Z504;O75494-5;O75494-4;O75494-6;O75494-3;O75494-2;O75494;Q6IQ42 SRSF10;FUSIP1 Serine/arginine-rich splicing factor 10 yes no 0 0 2 2.33 0.471 2 1 30.329 30.409 3;4 5.9342E-16 5887 20230619_1881_Aki_TMTPro18x_K_F2 180.84 157.37 52738 66062 53567 51594 75972 45372 54889 66792 48095 53898 59559 40982 45679 35294 47423 63650 64670 39995 48934 60308 54612 53327 76241 47021 56420 66363 49888 54708 59843 42121 47138 38082 49227 62133 61538 38328 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87897000 20378 1114 19066 38665;38666;38667 31007;31008 31007 2 9606 Homo sapiens -0.001498812750014622 NVADYYPEYK Unmodified 1260.5663 0.56626845 2247 J3QL14;B2R7M1;F5GYQ1;B7Z6L9;P61421;B7Z788 ATP6V0D1 V-type proton ATPase subunit d 1 yes no 0 0 0 5.5 0.5 1 1 51.39 51.466 3 0.032109 14398 20230619_1885_Aki_TMTPro18x_K_F5 46.706 41.815 45946 33659 42140 51396 45139 49214 48489 42732 63312 52253 52232 50294 56778 42324 47792 51211 55368 61229 42428 30969 43224 50379 46767 49770 49132 44394 63196 52273 54286 50872 57345 44443 49194 51866 52943 58028 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155250000 20379 2247 19067 38668;38669 31009 31009 1 9606 Homo sapiens -0.05359203318721484 NVAIFTAGQESPIILR Unmodified 1727.957 0.95701956 2891 E7EMW7;O95071-2;O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 0 0 0 2 0 1 61.846 61.856 3 4.3248E-06 19437 20230619_1881_Aki_TMTPro18x_K_F2 113.48 79.299 54220 41095 51570 52726 52944 78477 52736 58413 78182 58050 49746 55813 54873 44861 64485 57080 58668 59918 50092 37730 52654 52609 55097 76876 53973 61016 77044 58677 52666 56362 56296 47301 65041 57346 56198 56876 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50709000 20380 2891 19068 38670 31010 31010 1 9606 Homo sapiens 0.12215932940353014 NVALGNAIR Unmodified 926.52976 0.52976379 2382 Q8TEX9-2;Q8TEX9;B3KQ33;Q59FI4;B3KPS9;B3KT38;B3KTB3;D3DS63;H0YN14 IPO4 Importin-4 yes no 0 0 0 1 0 1 42.223 42.223 2 0.00035345 11064 20230619_1880_Aki_TMTPro18x_K_F1 138.83 72.396 99747 67795 83014 89198 108250 106880 104750 104450 124610 110010 122960 122390 100220 91107 116270 107790 132720 103830 92008 62289 86124 88546 110310 106700 106420 107010 125700 111270 125260 122610 103830 95844 118790 107880 126630 98768 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93702000 20381 2382 19069 38671 31011 31011 1 9606 Homo sapiens 0.06356009365890714 NVALLAYNR Unmodified 1032.5716 0.5716286 4245 Q8NBM8;B3KXF9;E7EVZ5 PCYOX1L Prenylcysteine oxidase-like yes no 0 0 0 3 0 1 48.901 48.979 2 0.0046691 13682 20230619_1882_Aki_TMTPro18x_K_F3 94.806 79.941 211920 162030 192480 206660 253930 267300 255450 267750 326430 184790 198600 198770 200960 178640 243740 165390 236690 206020 195730 148750 198160 205830 258990 265680 259540 271200 322990 191890 210000 200470 207180 184270 246250 168970 226320 195360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72935000 20382 4245 19070 38672 31012 31012 1 9606 Homo sapiens 0.05664565054416926 NVALLSQLYHSPAR Unmodified 1567.8471 0.84707518 3938 Q15717;Q15717-2 ELAVL1 ELAV-like protein 1 yes no 0 0 0 5.5 0.5 1 1 52.864 52.939 3 1.5855999999999998E-46 15018 20230619_1885_Aki_TMTPro18x_K_F5 293.41 261.37 77820 70372 69654 72904 66206 75588 82416 78055 81007 79560 69481 74075 76768 67163 73621 79414 69491 79735 71942 64438 71413 73500 69493 76317 82109 79624 82181 80152 72203 75193 77979 70158 74726 79613 66600 75692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 535660000 20383 3938 19071 38673;38674 31013 31013 1 9606 Homo sapiens 0.08586552391807345 NVAQYNANHPDFPMQIEQLER Unmodified 2513.1758 0.17575589 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5 0 1 55.352 55.416 3 4.3257000000000005E-45 16028 20230619_1885_Aki_TMTPro18x_K_F5 246.31 234.23 25752 22230 24502 23770 20943 25979 25043 24666 25735 33027 32794 30854 34540 27339 28267 37936 33954 40294 23811 20364 24939 23922 22168 26077 25050 25511 26493 32850 33372 31316 34886 28896 29225 38049 32476 38224 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99304000 20384 3881 19072 38675 31014 31014 1 9606 Homo sapiens -0.020304953411596216 NVAQYNANHPDFPMQIEQLER Oxidation (M) 2529.1707 0.17067052 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 0 5 0 1 52.482 52.556 3 9.3722E-07 14851 20230619_1885_Aki_TMTPro18x_K_F5 88.969 84.941 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20385 3881 19072 38676 31015 31015 2553 1 9606 Homo sapiens -0.03274799203745715 NVASGGGGVGDGVQEPTTGNWR Unmodified 2113.9777 0.97770801 3212 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;D3DUW6;A0A8V8TQT5;A0A994J3G5;O00429-7 DNM1L Dynamin-1-like protein yes no 0 0 0 4.67 0.471 1 2 46.118 46.178 3 7.4726E-46 12221 20230619_1883_Aki_TMTPro18x_K_F4 212.74 205.38 19084 14684 18602 24865 18685 21202 25594 22329 23474 20735 26214 23289 21409 21566 24599 22085 27721 25305 17636 13526 18982 24204 19579 21728 25331 22713 24116 21122 26547 23483 22180 22319 25115 22376 26476 24009 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112130000 20386 3212 19073 38677;38678;38679 31016;31017 31016 2 9606 Homo sapiens -0.03472173208638196 NVCTEAGMFAIR Unmodified 1367.6326 0.63259065 896 V9HW24;A0A087X2I1;P62333 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 7.5 0.5 1 1 53.452 53.523 2 1.8317E-09 15043 20230619_1888_Aki_TMTPro18x_K_F8 183.85 153.17 105430 95729 90360 106310 89002 111140 112920 116890 130070 130350 110920 110360 140860 108470 123420 149710 135980 128330 97437 87708 93147 106580 93348 112150 112990 119350 130850 130410 116020 112920 141930 114170 126640 148510 129930 122140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195590000 20387 896 19074 38680;38681 31018 31018 1 9606 Homo sapiens -0.03652034019955863 NVCVVHCLDGR Unmodified 1327.6125 0.61252391 3291 O75061-4;O75061;O75061-2;S4R305;O75061-3 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes no 0 0 0 6.5 0.5 1 1 39.871 39.947 3 6.2439E-05 9216 20230619_1887_Aki_TMTPro18x_K_F7 112.43 95.49 73139 47617 59456 69583 65146 56725 64926 68679 81513 66137 69061 74540 76486 65347 65520 85322 86761 79481 67439 43810 61655 68282 67152 58633 65998 69287 81577 67246 71796 75004 77341 68748 68096 85034 82757 75580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89098000 20388 3291 19075 38682;38683 31019 31019 1 9606 Homo sapiens -0.03817784959937853 NVDCILLAR Unmodified 1072.5699 0.56991404 3805 Q05DJ2;Q8WV80 MTAP Purine nucleoside phosphorylase yes no 0 0 0 7.5 0.5 1 1 52.652 52.725 2 0.00022807 14779 20230619_1887_Aki_TMTPro18x_K_F7 118.18 79.155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20389 3805 19076 38684;38685 31020;31021 31020 2 9606 Homo sapiens 0.03653187974168759 NVDFNYATK Unmodified 1070.5033 0.50327426 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;A0A024QZ91;A0A024QZC0;Q8WWM7-7;H3BSK9;H3BUE3;H3BSQ5 ATXN2L Ataxin-2-like protein yes no 0 0 0 7.33 0.471 2 1 48.906 48.986 2;3 0.014292 13091 20230619_1887_Aki_TMTPro18x_K_F7 77.379 47.906 411420 350040 371150 340930 353780 451200 370410 382300 539360 243580 254970 234890 245120 208870 279230 272530 256270 236530 380210 320430 379970 346780 370220 446300 377650 391550 527570 254010 274470 238250 252240 219630 282030 270880 245280 225110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 232610000 20390 4285 19077 38686;38687;38688 31022;31023 31022 2 9606 Homo sapiens -0.02915724316108026 NVDILKDPETVK Unmodified 1369.7453 0.74529545 3228 O14980;A0A7I2V461;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;B7ZB16;B4DR01;B3KWD0 XPO1 Exportin-1 yes no 0 0 1 5 0.894 2 1 2 51.308 51.372 3;4 0.0001856 14499 20230619_1886_Aki_TMTPro18x_K_F6 106.26 75.694 933010 845860 890600 998810 889960 1038900 1067000 991920 1038400 1091000 1240100 1020200 1222000 960120 1228200 1122000 1063200 876980 862980 775440 909030 996690 929420 1046500 1064800 1019500 1067500 1095100 1260900 1037800 1247100 1001000 1239100 1111800 1017600 836240 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 926650000 20391 3228 19078 38689;38690;38691;38692;38693 31024;31025;31026;31027 31027 4 9606 Homo sapiens 0.07521261249348754 NVDLLSDMVQEHDEPILK Oxidation (M) 2110.0252 0.025235058 661;2990 F8W543;H0YH88;P55209;F8VY35;H0YIV4;B7Z2V4;F5H4R6;F8W0J6;F8VUX1;A0A024RBB7;P55209-2;F8W020;F8VXI6;F8VV59;B7Z9C2;A0A024RBE6;P55209-3;F8W118;H0YHC3 NAP1L1 Nucleosome assembly protein 1-like 1 no no 0 1 0 3.33 0.471 2 1 56.541 56.568 3;4 6.6864E-14 16922 20230619_1882_Aki_TMTPro18x_K_F3 163.62 144.33 82212 72577 73550 81266 80288 92809 84209 78967 100190 92276 97938 88071 97727 79187 86704 106880 87510 103640 75991 66507 75587 81512 83043 92671 85166 82003 101060 92453 100500 89365 99190 83464 88527 106720 83833 98409 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 264090000 20392 2990;661 19079 38694;38695;38696 31028;31029 31028 406 2 9606 Homo sapiens 0.014623449473674555 NVDLLSDMVQEHDEPILK Unmodified 2094.0303 0.030320436 661;2990 F8W543;H0YH88;P55209;F8VY35;H0YIV4;B7Z2V4;F5H4R6;F8W0J6;F8VUX1;A0A024RBB7;P55209-2;F8W020;F8VXI6;F8VV59;B7Z9C2;A0A024RBE6;P55209-3;F8W118;H0YHC3 NAP1L1 Nucleosome assembly protein 1-like 1 no no 0 0 0 4.5 0.5 1 1 61.875 61.901 3 6.9714E-24 18758 20230619_1885_Aki_TMTPro18x_K_F5 203.56 188.3 906350 776920 887510 833410 561880 747720 728410 805940 835840 1141700 1097500 1003700 1138100 973130 994680 1245000 1119300 1238500 838180 711750 897890 836590 615060 764070 729210 828120 857130 1131100 1114700 1024500 1153400 1019400 1022300 1245600 1070600 1176000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3450499999.9999995 20393 2990;661 19079 38697;38698 31030;31031 31031 2 9606 Homo sapiens 0.02706648809953549 NVDLSTFYQNR Unmodified 1355.647 0.64697839 2627 B4DZ87;O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 0 4.5 3.5 1 1 53.616 53.652 2;3 1.0335999999999999E-22 15853 20230619_1880_Aki_TMTPro18x_K_F1 243.53 202.1 244020 214360 230550 272910 257020 291250 285320 284710 304510 285080 303950 313110 303190 271000 315460 322310 328550 360220 225640 196680 236010 270980 265700 292940 286630 291360 309070 288950 312000 315200 310140 283640 321330 325170 314440 341620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 435760000 20394 2627 19080 38699;38700 31032;31033 31032 2 9606 Homo sapiens -0.016619222757981333 NVDMLSELVQEYDEPILK Unmodified 2134.0504 0.050387176 717 Q99733-2;Q99733;B4DS05;B7ZB83;B7ZAK9;A0A024RCC9;A0A2U9QGI0;C9JZI7;A0A994J3W0;B7ZAC7;A0A0J9YXQ2;A8MXH2;H0YCI4 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 0 0 0 6 0 1 65.814 65.857 3 0.016438 20701 20230619_1886_Aki_TMTPro18x_K_F6 52.814 37.392 6231.6 5148.5 4135.4 8130 5483.3 7887.7 5582.9 5551.4 7889.3 5324.2 8103.7 6454.4 6810.2 6329.6 6938.1 5701.4 5461.2 7277.6 5746.5 4736.8 4421.6 7948.4 5616.3 7932.4 5692.6 5833 7900.2 5436.5 8235.7 6503.9 6997.9 6499.6 6965.5 5832.6 5252.1 6888.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14338000 20395 717 19081 38701 31034 31034 1 9606 Homo sapiens 0.028723997499128018 NVDPFHIYFCNLK Unmodified 1665.7973 0.79734779 4150 Q7L0Y3;C9JVB6 TRMT10C Mitochondrial ribonuclease P protein 1 yes no 0 0 0 3 0 1 62.002 62.031 3 0.00029699 19244 20230619_1882_Aki_TMTPro18x_K_F3 94.688 68.558 62680 50815 59074 64498 57319 72448 70305 82782 91143 72050 65204 72300 69541 73078 79921 76083 76755 92940 57927 46637 60333 64126 60137 72854 70787 83516 90596 73427 68390 73399 71439 75486 80896 77366 73581 88037 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 359080000 20396 4150 19082 38702 31035 31035 1 9606 Homo sapiens -0.008918986085063807 NVDVEFFK Unmodified 996.49165 0.49164694 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 5.5 0.5 1 1 58.169 58.232 2 0.0023613 17346 20230619_1886_Aki_TMTPro18x_K_F6 142.04 103.72 586690 473080 521880 579130 475150 542900 552490 548930 559390 714970 782370 835100 799990 757690 767160 843170 844230 934530 541950 434030 535170 575710 499530 551930 553160 565010 578920 717020 793450 839570 814830 788370 785380 850860 807630 886320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 960310000 20397 630 19083 38703;38704 31036;31037 31037 2 9606 Homo sapiens -0.006739213394212129 NVEAMNFADIER Unmodified 1407.6453 0.64526383 390 A0A024R6C9;P36957;Q6IBS5;P36957-2;Q86TQ8 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes no 0 0 0 3 0 1 54.731 54.778 2 1.3849E-06 16244 20230619_1882_Aki_TMTPro18x_K_F3 155.48 140.79 93175 88817 94350 107180 92924 117830 122460 120960 138800 122650 117280 125070 136590 105360 123200 128840 134010 134980 86254 81426 95845 106880 97542 118370 122230 123400 139600 123950 122260 126170 138100 110640 126130 129430 128120 128140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197240000 20398 390 19084 38705 31038 31038 1 9606 Homo sapiens -0.04225299356085088 NVEDFTGPR Unmodified 1033.4829 0.48287317 2807 D3DP46;P61009 SPCS3 Signal peptidase complex subunit 3 yes no 0 0 0 3.5 0.5 1 1 43.019 43.074 2 3.4666E-06 10939 20230619_1882_Aki_TMTPro18x_K_F3 187.22 146.95 476830 335010 421010 460810 487440 532950 554360 511080 633460 565670 609630 570740 660170 545090 529890 642120 681540 622340 440100 307910 433630 455860 502980 532850 557300 525160 639730 569150 628420 578590 666010 568330 550070 642310 650220 591530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 513130000 20399 2807 19085 38706;38707 31039;31040 31039 2 9606 Homo sapiens -0.03252894975889831 NVEDLSGGELQR Unmodified 1315.6368 0.63680763 3692 P61221;D6R9I9 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 0 0 2 0 1 45.069 45.152 2 3.3481E-35 12189 20230619_1881_Aki_TMTPro18x_K_F2 298.58 249.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20400 3692 19086 38708 31041 31041 1 9606 Homo sapiens -0.008385300010559149 NVEEIVVK Unmodified 928.52295 0.52294707 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;B4E263;A2VDI1;B3KWS1;Q8N7L7;B7ZAU8 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 50.248 50.302 3 0.008012 14138 20230619_1883_Aki_TMTPro18x_K_F4 75.378 29.382 91329 70644 87052 93127 83700 103800 99636 96272 112430 109310 117990 115600 124160 94921 106490 135590 127110 124150 84387 64873 88792 92325 87739 103940 99942 99234 114030 109970 121040 116430 125630 100770 109900 134870 121400 118050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76283000 20401 2332 19087 38709;38710 31042;31043 31042 2 9606 Homo sapiens 0.05582651694658125 NVELTEVGPR Unmodified 1112.5826 0.58258722 3027 H0Y714;Q96G21;E7ENR5;B9A008 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 yes no 0 0 0 4 0 1 44.638 44.682 2 0.062392 11567 20230619_1883_Aki_TMTPro18x_K_F4 78.759 46.998 57526 48233 57849 62170 66556 76572 73844 71687 78061 71443 78140 73390 81912 63890 75017 74569 93578 78169 53204 44268 58909 61820 68651 76207 74154 73561 79273 72286 80306 74118 83132 66818 77415 74972 89249 74264 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48138000 20402 3027 19088 38711 31044 31044 1 9606 Homo sapiens 0.030799226380622713 NVELVEGEEGR Unmodified 1229.5888 0.58879481 2017 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 yes no 0 0 0 1 0 1 42.878 42.878 2 4.7539E-09 11361 20230619_1880_Aki_TMTPro18x_K_F1 189.17 140.37 82043 64984 69208 88891 93412 111200 84365 82155 109110 126050 135030 140250 128540 113740 124240 143720 150040 147950 75750 59694 71861 88019 95012 110050 86356 87120 110870 125470 137060 140810 131240 119760 127940 144120 143290 140490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114640000 20403 2017 19089 38712 31045 31045 1 9606 Homo sapiens -0.016816039211107636 NVEMFMNIEK 2 Oxidation (M) 1285.5683 0.56825906 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 2 0 5 0 1 49.696 49.772 3 0.02504 13616 20230619_1885_Aki_TMTPro18x_K_F5 53.013 19.973 48616 43137 50896 52038 55788 51965 53316 53718 60783 60240 65440 78910 73425 58279 61809 59226 66123 78900 44995 39557 51577 51834 57417 52628 54152 54947 61707 61081 67356 78484 74096 60883 63281 60614 63313 74685 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13574000 20404 4016 19090 38713 31046 31046 2653;2654 1 9606 Homo sapiens -0.0631023389676102 NVEPFTSVLSLPYPFASEINK Unmodified 2351.2049 0.20491398 1899 Q9BYD6;A0PJ79;H0Y8N7 MRPL1 39S ribosomal protein L1, mitochondrial yes no 0 0 0 2.5 0.5 1 1 65.651 65.672 3 0.090661 21105 20230619_1881_Aki_TMTPro18x_K_F2 33.237 19.81 2456 2769.1 4051.4 3618.6 1560.6 3586 3492.5 2885.6 3318.1 3645.9 4837.8 4035.4 2779.3 3933.3 3670.5 4720.2 4106.3 5955.3 2288.6 2539.5 3945.5 3584.4 1878.9 3607.7 3407.1 3020.1 3445.6 3656.5 4797.6 4080.7 2955 4097.2 3747.8 4795.8 3937.5 5636.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41443000 20405 1899 19091 38714;38715 31047 31047 1 9606 Homo sapiens 0.08335972226859667 NVESGEEELASK Unmodified 1290.5939 0.59393976 1871 A0A994J4Y8;Q96HS1-2;Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 0 0 0 1 0 1 45.627 45.627 3 0.011501 12545 20230619_1880_Aki_TMTPro18x_K_F1 63.8 49.368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20406 1871 19092 38716 31048 31048 1 9606 Homo sapiens -0.0397334484912335 NVESYTK Unmodified 839.4025 0.40249759 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 5 0.816 1 1 1 40.196 40.271 2 0.0071349 9672 20230619_1883_Aki_TMTPro18x_K_F4 127.56 56.652 135550 68023 174460 184010 225320 250220 186630 254280 210060 156920 238610 308750 199050 200550 241760 100190 284740 279520 125330 63304 174800 176940 228910 247790 191380 256710 213540 168340 242310 302430 206670 205150 246640 112820 271990 263610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 219040000 20407 3384 19093 38717;38718;38719 31049;31050 31049 2 9606 Homo sapiens -0.02362756298941804 NVFDEAILAALEPPEPK Unmodified 1851.9618 0.96183016 614 A0A024RAA5;P60953;B4E1U9;B7ZAY4;B4DMH5;A0A024R9T1 CDC42;hCG_39634 Cell division control protein 42 homolog yes no 0 0 0 4.91 2.11 1 1 1 1 2 2 2 1 65.896 65.923 3;4 2.8949E-09 21168 20230619_1881_Aki_TMTPro18x_K_F2 130.39 116.04 78580 68466 73503 76586 59974 76474 79491 76423 89150 84255 87706 92598 96194 78540 90076 93529 87272 87815 72651 62743 74919 76706 63987 77336 79330 78313 90202 84990 90469 93138 97584 82271 91567 93430 83533 83466 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 1529899999.9999998 20408 614 19094 38720;38721;38722;38723;38724;38725;38726;38727;38728;38729;38730 31051;31052;31053;31054;31055;31056;31057;31058 31052 8 9606 Homo sapiens 0.06992772292437621 NVFNALIR Unmodified 945.5396 0.53960019 3104 I3L1P8;Q6IBH0;Q02978;Q02978-2 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 5 0 1 56.37 56.432 2 0.0011707 16429 20230619_1885_Aki_TMTPro18x_K_F5 120.45 79.329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20409 3104 19095 38731 31059 31059 1 9606 Homo sapiens 0.06465197371278464 NVFNPEAFKPGNTHK Unmodified 1698.8478 0.84780346 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 1 3 0 1 48.925 49.003 4 2.0391E-07 13676 20230619_1882_Aki_TMTPro18x_K_F3 132.81 114.75 201420 173920 189700 216130 194380 249450 231330 214520 283250 195340 202460 180860 234290 195670 232430 230870 227240 238040 186220 159550 193970 215180 202890 248820 232590 221120 282130 198280 212830 184960 238030 203280 236080 231850 217550 225970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208510000 20410 1532 19096 38732 31060 31060 1 9606 Homo sapiens 0.026333470408189896 NVFSSSGTSFSGR Unmodified 1331.6106 0.61059288 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 3 0 1 46.629 46.707 2 2.4186E-27 12653 20230619_1882_Aki_TMTPro18x_K_F3 289.71 258.64 62768 53711 56992 58220 55829 69091 58838 57727 74236 61177 63392 49937 62023 51424 61963 63178 67390 65297 58012 49210 58369 58585 58263 68781 59632 59849 74287 61351 65404 51317 63343 53645 63314 63413 64411 62005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83998000 20411 68 19097 38733 31061 31061 1 9606 Homo sapiens -0.04194799172523744 NVGCLQEALQLATSFAQLR Unmodified 2118.0892 0.089172718 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PGB5 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 66.902 66.935 3 1.4844E-10 21065 20230619_1886_Aki_TMTPro18x_K_F6 136.62 117.79 9225.3 4762.7 6619.1 6618.1 4281.3 5948 6081.4 4178.3 8134.4 7292.7 8106.4 9456 7612.8 7691.7 8446.6 8601.5 8948.1 10608 8490.8 4384.8 6905.6 6520.5 4701 6022.3 6089.5 4485.2 8163.8 7274.6 8307.9 9435.1 7834.1 8036.5 8603.6 8740.9 8568.1 10048 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22285000 20412 1637 19098 38734;38735 31062 31062 1 9606 Homo sapiens 0.07485169894971477 NVGIFLK Unmodified 789.47487 0.47487467 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 4 0 1 56.522 56.528 2 0.02183 16881 20230619_1883_Aki_TMTPro18x_K_F4 108.24 67.292 284340 227310 225630 278650 235090 318180 277510 297200 358370 357640 331580 350560 402330 368290 320890 432240 390240 403770 262430 208560 234630 277640 245330 318110 279840 306590 359610 358100 344610 356850 404760 382560 332180 431430 372800 383750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 310950000 20413 4746 19099 38736 31063 31063 1 9606 Homo sapiens 0.07171622565283542 NVGQFSGFPFEK Unmodified 1355.651 0.65100113 3032 H0Y993;P35659;B4DFG0;A0A494C028;P35659-2;H0Y8X0;D6RDA2 DEK Protein DEK yes no 0 0 0 1.5 0.5 1 1 61.342 61.353 3 0.00017424 19140 20230619_1881_Aki_TMTPro18x_K_F2 101.33 83.518 154580 131410 131940 134530 105400 137550 138200 130960 165610 177510 152920 151340 193790 166600 148970 214550 173500 181360 142800 120340 135550 135730 112720 138740 138310 135500 166800 176150 159230 155410 194400 173860 153990 212780 165820 172580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 894550000 20414 3032 19100 38737;38738 31064;31065 31065 2 9606 Homo sapiens -0.01259832782079684 NVGSSQFK Unmodified 865.42938 0.42938104 693 A0A024RBS6;F5H1S9;G8JLB3;E5KMT6;E5KMT5;Q9Y606-2;Q9Y606;F5GXL3;F5H168;F5GY32;F8W9U5;F5H1B2 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial yes no 0 0 0 8 0 1 40.677 40.669 2 0.002378 9763 20230619_1888_Aki_TMTPro18x_K_F8 127.68 94.321 25857 17555 31535 26865 37805 43537 28484 35542 38461 24436 35216 27907 29320 25408 33149 15392 38263 27137 23927 16158 31624 26576 38542 42551 29599 36531 38432 25428 35980 28101 30300 25779 33817 16349 36483 25691 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56366000 20415 693 19101 38739 31066 31066 1 9606 Homo sapiens -0.008716476877452806 NVHDLLAK Unmodified 908.50797 0.50796571 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;A0A994J583;A0A994J7K1;O00507;O00507-2;B4DGX9 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 0 0 0 8 0 1 45.377 45.405 3 0.007632 11654 20230619_1888_Aki_TMTPro18x_K_F8 82.749 55.495 49505 39341 48874 51805 50656 56769 50291 55334 70112 67437 73757 82251 90725 76659 53283 98789 101370 113390 45763 36122 49742 51354 52510 56989 51366 56943 70464 67973 76243 82665 90325 80451 57749 99578 96613 107500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61602000 20416 1867 19102 38740 31067 31067 1 9606 Homo sapiens 0.050052046173163944 NVHELEK Unmodified 867.44503 0.4450311 3549;1719 A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6;Q7Z7R0;O14729;O14794;Q66K75;P13533;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH11;MYH6;MYH10 Myosin-11;Myosin-6;Myosin-10 no no 0 0 0 3.5 0.5 1 1 36.425 36.475 3 0.0059899 8169 20230619_1882_Aki_TMTPro18x_K_F3 103.56 57.137 90987 43329 127190 110100 163420 137320 136080 148200 130790 98724 177830 178750 130380 140800 161280 62923 185510 176510 84191 40283 126580 105990 165660 137010 138740 149310 135170 104850 178230 176440 136230 142360 164230 71182 177200 166480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214210000 20417 1719;3549 19103 38741;38742 31068 31068 1 9606 Homo sapiens 0.006006388292917109 NVHGINFVSPVR Unmodified 1337.7204 0.7204181 1649 P53634;A0A7I2V2Q8;A0A7I2V466;B4DJQ8;A0A7I2V6E3;A0A7I2YQT5;H0YCY8;A0A7I2V5C5 CTSC Dipeptidyl peptidase 1;Dipeptidyl peptidase 1 exclusion domain chain;Dipeptidyl peptidase 1 heavy chain;Dipeptidyl peptidase 1 light chain yes no 0 0 0 3 0 1 45.024 45.097 3 2.2574E-05 11856 20230619_1882_Aki_TMTPro18x_K_F3 110.38 89.128 140030 114410 133240 139820 155310 178770 161450 156370 187030 171340 169750 167330 184440 158720 155000 199540 209430 200840 129430 104960 136310 139620 159830 177290 163190 161670 188410 172310 175580 169830 186460 166180 161370 199800 199790 190780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 243350000 20418 1649 19104 38743 31069 31069 1 9606 Homo sapiens 0.06506670957310234 NVHLAPGWLMQLEK Oxidation (M) 1650.8552 0.85519702 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 0 2 0 1 58.601 58.614 3 0.0099659 17934 20230619_1881_Aki_TMTPro18x_K_F2 63.29 47.766 57807 50156 60498 60072 51004 61896 60840 63956 66369 64427 61698 54399 64319 54120 72440 68052 61069 61844 53493 45993 61092 59897 54029 62490 60976 65196 67125 64784 63619 55713 65931 56579 72868 67833 58545 58803 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 252230000 20419 3881 19105 38744 31070 31070 2554 1 9606 Homo sapiens 0.05580363316903458 NVHLAPGWLMQLEK Unmodified 1634.8603 0.8602824 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3 0 1 61.112 61.141 3 9.6402E-07 18897 20230619_1882_Aki_TMTPro18x_K_F3 101.2 78.324 29881 29154 33878 34127 30084 33224 36267 34320 38273 32463 33923 27021 34990 24723 34687 31615 34294 36763 27694 26718 34028 34057 31698 33697 36275 34946 38685 32750 35018 27631 35628 25984 35238 31954 32833 34854 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143340000 20420 3881 19105 38745 31071 31071 1 9606 Homo sapiens 0.06824667179535027 NVHLFITGEK Unmodified 1156.6241 0.6240581 1999 A8K0P8;Q68CQ4;B3KVX2 DIEXF Digestive organ expansion factor homolog yes no 0 0 0 1 0 1 48.815 48.815 3 0.0012419 13895 20230619_1880_Aki_TMTPro18x_K_F1 91.701 80.872 30976 24820 32847 36454 33749 41485 38741 36717 46338 41019 40155 39476 46338 38384 39139 51070 43503 51693 28654 22817 33256 35904 35153 41435 38999 37960 46526 41200 41752 40134 46754 40312 40236 51111 41638 49062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36199000 20421 1999 19106 38746 31072 31072 1 9606 Homo sapiens 0.05201103397348561 NVHQRPTVALLCGPHVK Unmodified 1925.0418 0.041769016 4346 Q96F86;H3BSQ0;H3BPN4 EDC3 Enhancer of mRNA-decapping protein 3 yes no 0 0 1 5.5 0.5 1 1 40.044 40.133 5 2.292E-17 9591 20230619_1886_Aki_TMTPro18x_K_F6 169.98 137.89 42573 35953 40919 42441 35435 37111 42150 46356 52465 46794 43822 37084 42652 32162 42592 50889 45965 39899 39362 32968 41627 42281 37422 38157 42445 46718 52510 46969 45275 37964 43546 34340 43542 50197 43904 38035 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90482000 20422 4346 19107 38747;38748 31073 31073 1 9606 Homo sapiens 0.11624980205260727 NVHSEDFENR Unmodified 1245.5374 0.53742794 1600 Q6DHZ8;B2RBM8;A0A669KBJ7;Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes no 0 0 0 1.5 0.5 1 1 31.492 31.523 3 2.4291E-10 6580 20230619_1880_Aki_TMTPro18x_K_F1 211.46 198.51 44847 23889 36536 47626 46170 41588 50391 50057 58165 47098 57013 53258 54785 49357 50292 50612 65560 54715 41315 22097 38011 46021 47259 42690 50789 50490 58719 47958 58424 53676 55806 51098 52057 51077 62504 51965 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185280000 20423 1600 19108 38749;38750 31074 31074 1 9606 Homo sapiens -0.07551927895133304 NVHYCTLR Unmodified 1061.5076 0.50764813 1587 A0A5H1ZRP4;Q8WX92-2;Q8WX92 NELFB Negative elongation factor B yes no 0 0 0 1 0 1 32.87 32.87 3 0.00069067 7122 20230619_1880_Aki_TMTPro18x_K_F1 126.62 104.54 49442 39223 43729 45623 63366 71799 57172 58133 80906 14931 15046 16058 13723 12242 25816 11494 18809 14021 45665 35970 45208 45887 64172 70285 58673 59163 78244 17577 18509 16147 14657 12715 25569 11752 18031 13308 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41486000 20424 1587 19109 38751 31075 31075 1 9606 Homo sapiens -0.020645383741566548 NVIAEHEIR Unmodified 1079.5724 0.57235688 1511 A0A8V8TME4;A0A8V8TP68;A0A8V8TMV9;Q49AR9;A0A3B3ISP1;Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A yes no 0 0 0 3 0 1 35.944 36.001 3 0.00014812 7961 20230619_1882_Aki_TMTPro18x_K_F3 113.1 94.784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20425 1511 19110 38752 31076 31076 1 9606 Homo sapiens 0.035753597034727136 NVIDGDLCEQFNSMEPNK Unmodified 2108.9143 0.9143044 3931 Q15393;A8K6V3;B3KQH1;B3KM77;Q15393-3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 4.5 0.5 1 1 60.318 60.345 3 1.0652E-23 18479 20230619_1883_Aki_TMTPro18x_K_F4 195.6 193.57 24834 27028 27336 26818 22443 29656 25215 22777 33918 33438 33626 28642 36596 26581 29187 38282 36360 29815 23030 24726 27487 27152 23821 29624 25539 24039 34055 33092 34599 29250 36880 28119 30253 37782 34675 28432 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212740000 20426 3931 19111 38753;38754 31077 31077 1 9606 Homo sapiens -0.09579618032375947 NVIEEFRR Unmodified 1061.5618 0.56179219 3119 I6L9D1;Q9NRG4;B0R0U3;Q05C86 SMYD2 N-lysine methyltransferase SMYD2 yes no 0 0 1 6 0 1 42.158 42.253 3 0.0028367 10450 20230619_1886_Aki_TMTPro18x_K_F6 82.75 32.937 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20427 3119 19112 38755 31078 31078 1 9606 Homo sapiens 0.03347377049044553 NVIFVIDK Unmodified 946.54877 0.54876789 2801 CON__Q3T052 yes yes 0 0 0 1 0 1 59.703 59.703 2 0.012001 18367 20230619_1880_Aki_TMTPro18x_K_F1 90.657 19.738 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20428 2801 19113 38756 31079 31079 1 0.07335545936950894 NVIGLQMGTNR Oxidation (M) 1217.6187 0.61865515 1438 A0A384MTL2;P37802;P37802-2;X6RJP6 TAGLN2 Transgelin-2 yes no 0 1 0 3.67 3.09 1 1 1 41.72 41.745 2 0.0017378 10586 20230619_1881_Aki_TMTPro18x_K_F2 94.309 77.638 543930 455650 453010 466450 483960 497490 655600 647740 738580 283570 240790 194730 216040 163150 379320 267090 241440 179330 502340 417290 468390 471080 504760 504340 653060 641520 726290 303990 269510 201180 229040 174870 374600 262190 231910 171490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 589180000 20429 1438 19114 38757;38758;38759 31080;31081;31082 31081 927 3 9606 Homo sapiens 0.018550565432633448 NVIGLQMGTNR Unmodified 1201.6237 0.62374052 1438 A0A384MTL2;P37802;P37802-2;X6RJP6 TAGLN2 Transgelin-2 yes no 0 0 0 3 0.816 1 1 1 48.181 48.244 2 8.1488E-07 13350 20230619_1882_Aki_TMTPro18x_K_F3 208.59 184.56 794210 689790 702540 634420 540090 683640 908120 887050 1096000 361380 250560 172860 277860 196210 481700 320360 329540 180730 733960 631110 718740 646970 584780 692300 899310 877950 1069600 388810 298090 185620 292480 208340 476880 312670 315740 173680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 774390000 20430 1438 19114 38760;38761;38762 31083 31083 1 9606 Homo sapiens 0.03099360405894913 NVIHPFLSR Unmodified 1081.6033 0.60326308 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;P26640-2 VARS Valine--tRNA ligase yes no 0 0 0 4.5 0.5 1 1 43.957 44.001 3 1.5301E-08 11250 20230619_1883_Aki_TMTPro18x_K_F4 176.38 134.51 307310 300980 288930 313300 336140 379530 346720 375030 432010 319460 306420 272870 313560 247760 361730 334490 335060 301760 284370 275540 295910 316410 345930 378730 351570 381790 430020 324620 320530 278520 322000 261080 365350 333010 320610 287080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 442260000 20431 725 19115 38763;38764 31084;31085;31086 31085 3 9606 Homo sapiens 0.06572557808362944 NVIISSAAERPLEIR Unmodified 1666.9366 0.93661847 3754 P78346;P78346-2;Q5VU11 RPP30 Ribonuclease P protein subunit p30 yes no 0 0 1 8 0 1 49.68 49.752 3 6.8631E-14 13425 20230619_1888_Aki_TMTPro18x_K_F8 177.3 137.79 97169 79026 88380 90888 84979 101630 107880 103820 115230 101010 110550 91853 122340 92704 111450 118520 106770 94890 89779 72457 90496 90988 89224 102000 107670 105830 116740 101990 114050 93820 123880 96989 113300 117360 102120 90421 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 331960000 20432 3754 19116 38765 31087 31087 1 9606 Homo sapiens 0.1298276228051236 NVIQEPRPCGGPHTAVGTK Unmodified 2017.0163 0.016342126 510 A0A024R8B5;Q86YN1-2;Q86YN1 DOLPP1 Dolichyldiphosphatase 1 yes no 0 0 1 1 0 1 37.933 37.933 4 9.3438E-08 9177 20230619_1880_Aki_TMTPro18x_K_F1 119.37 104.44 55034 49408 51740 73435 64795 54302 71442 76937 67162 63175 73082 67728 83082 62866 59362 73452 72946 71032 50894 45409 53148 71904 66287 56900 71525 76681 68893 64690 75085 68442 83297 65599 61606 73470 69650 67499 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66695000 20433 510 19117 38766 31088 31088 1 9606 Homo sapiens 0.04851460892155046 NVISSSSFK Unmodified 967.49746 0.4974606 2750 Q13098-7;Q13098;Q13098-5;C9JFE4;A8K070;A0A096LPJ3;A0A096LP07;B4DND6;Q13098-6 GPS1 COP9 signalosome complex subunit 1 yes no 0 0 0 2 0 1 47.561 47.637 2 6.8376E-05 13352 20230619_1881_Aki_TMTPro18x_K_F2 167.12 118.95 117430 93123 103890 109640 111330 146740 135100 125880 169520 103080 91563 77234 87782 66207 93960 86239 85918 58755 108460 85409 106860 109850 115950 145020 135800 129410 167440 104770 97372 79252 89975 69736 94940 84849 82095 56196 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97558000 20434 2750 19118 38767 31089 31089 1 9606 Homo sapiens 0.012411771722554477 NVLCGNIPPDLFAR Unmodified 1584.8082 0.80824683 1319 P23193;A0A384MTX4;A0A1W2PPZ5;B7Z4W0;P23193-2;A0A1W2PRL9 TCEA1 Transcription elongation factor A protein 1 yes no 0 0 0 2 0 1 61.513 61.523 2 4.7751E-05 19287 20230619_1881_Aki_TMTPro18x_K_F2 140.24 123.99 43600 34621 47497 47876 38218 42940 50587 46236 48581 53719 50459 47084 55874 46404 48468 56234 54207 55790 40338 31806 47792 47197 40739 43864 50238 47227 49713 53677 51900 48092 56496 48424 49776 56305 51820 52989 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53819000 20435 1319 19119 38768 31090 31090 1 9606 Homo sapiens 0.03923503765759051 NVLCSACSGQGGK Unmodified 1336.5864 0.58636874 409 A0A024R6S1;O60884;A0A087WT48 DNAJA2 DnaJ homolog subfamily A member 2 yes no 0 0 0 4.5 3.5 1 1 42.263 42.265 2;3 9.8958E-21 11081 20230619_1880_Aki_TMTPro18x_K_F1 221.8 195.68 233970 178740 223210 248630 296030 304940 269420 274480 345820 286170 324470 336360 345570 267160 267640 334000 376860 311660 216170 164250 228860 245980 300990 303370 275520 282800 347000 290230 334800 336870 348260 281430 279880 333140 359070 296490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78666000 20436 409 19120 38769;38770 31091;31092 31091 2 9606 Homo sapiens -0.06846098922051169 NVLGHMQQGGAPSPFDR Unmodified 1809.8581 0.85805057 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;Q8WTZ9;O14943;Q49A78;B1APP8;H0Y757 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 1 0 1 47.082 47.082 3 6.6488E-49 13170 20230619_1880_Aki_TMTPro18x_K_F1 288.41 261.97 81662 64294 85197 92858 73785 84145 89462 91533 109760 141860 128830 151210 177580 142080 121550 164200 162600 185370 75520 59098 86130 91296 77999 85900 89965 94352 111640 140910 133510 152680 176990 148110 127090 165700 155330 175760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107590000 20437 1831 19121 38771 31093;31094 31094 2 9606 Homo sapiens -0.01448413296225226 NVLGHMQQGGAPSPFDR Oxidation (M) 1825.853 0.85296519 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;Q8WTZ9;O14943;Q49A78;B1APP8;H0Y757 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type yes no 0 1 0 8 0 1 42.231 42.234 3 4.0278E-07 10400 20230619_1888_Aki_TMTPro18x_K_F8 118.4 100.91 44524 32457 40853 41557 52356 50001 45754 47654 57125 50311 56480 56989 54610 45565 55769 66821 55739 66997 41114 29804 41969 41333 53261 49885 46875 48907 57515 50916 57906 57200 55844 48502 56756 66776 53409 63591 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121710000 20438 1831 19121 38772 31095 31095 1171 1 9606 Homo sapiens -0.026927171588567944 NVLGHMQQGGSPTPFDR Unmodified 1839.8686 0.86861526 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162;Q7KYX9;A0A0S2Z4A8 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 1 0 1 46.095 46.095 3 1.7354E-39 12733 20230619_1880_Aki_TMTPro18x_K_F1 266.27 246.43 93477 91724 99115 100050 80454 86473 86583 100310 100110 109630 113280 129700 119090 117500 120290 131710 131780 169040 86586 84004 99921 100240 85191 88841 87474 101770 101810 110860 116000 130310 121530 122340 123010 134170 126240 160030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184750000 20439 116 19122 38773 31096;31097 31096 2 9606 Homo sapiens -0.017724306418131164 NVLGHMQQGGSPTPFDR Oxidation (M) 1855.8635 0.86352988 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162;Q7KYX9;A0A0S2Z4A8 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 1 0 7.5 0.5 1 1 41.167 41.199 3 1.6734E-13 9953 20230619_1888_Aki_TMTPro18x_K_F8 149.99 140.03 52039 49988 54556 55761 59778 62713 57088 57980 60803 57335 68879 68746 65452 62154 64190 70325 72331 79191 48190 45793 55288 55947 61571 62805 57860 59549 62041 58335 70147 69075 66897 64740 65781 71018 69174 75097 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 203750000 20440 116 19122 38774;38775 31098;31099 31099 48 2 9606 Homo sapiens -0.030167345044219473 NVLIEVNPQTR Unmodified 1281.7041 0.70409934 4312 Q92979;A8K6D2;A0A087WVM7;V9GYP5;B4DQC7;A0A087WWQ2;A0A0U3B3H7;B4DP65 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes no 0 0 0 7 0.816 1 1 1 48.913 48.99 2 0.00032376 13094 20230619_1887_Aki_TMTPro18x_K_F7 143.4 116.6 127910 106910 116870 138120 141470 148780 139970 140130 169640 163210 157000 136630 183340 146320 149620 186400 183320 176770 118210 98126 120120 137020 144970 149460 142120 144360 170710 162960 162670 140370 184650 152800 154800 186010 175030 168030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 198900000 20441 4312 19123 38776;38777;38778 31100;31101 31101 2 9606 Homo sapiens 0.07451545000549231 NVLIVEDVVGTGR Unmodified 1369.7565 0.75652884 4584 Q9NRG1;Q9NRG1-2 PRTFDC1 Phosphoribosyltransferase domain-containing protein 1 yes no 0 0 0 4.5 0.5 1 1 59.239 59.267 2 9.6731E-06 17580 20230619_1885_Aki_TMTPro18x_K_F5 162.49 146.91 121440 96916 105430 112570 97446 118280 116390 119960 144470 134500 138300 149270 156490 147850 140700 198510 155650 191350 112150 88874 108370 112510 102530 119210 117140 122820 145340 135640 143060 150920 158520 155150 144510 198080 149030 181690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 316630000 20442 4584 19124 38779;38780 31102 31102 1 9606 Homo sapiens 0.08644083343483544 NVLLDPQLVPGGGASEMAVAHALTEK Unmodified 2616.3581 0.35813694 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 7 0 1 62.834 62.87 3 3.5268E-09 19121 20230619_1887_Aki_TMTPro18x_K_F7 114.91 106.41 416280 395370 432070 444180 373120 466190 425790 392160 444660 578150 482660 421750 583850 484890 459110 549150 511120 573200 385430 362230 436820 444940 393990 468100 427010 410790 454330 569560 497370 437440 586640 501820 472430 551890 488960 543940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2133499999.9999998 20443 2435 19125 38781 31103 31103 1 9606 Homo sapiens 0.11461219281000012 NVLLLGEDGAGK Unmodified 1184.6401 0.6401021 4757 Q9Y6G9;Q6MZE7 DYNC1LI1;DKFZp686A1525 Cytoplasmic dynein 1 light intermediate chain 1 yes no 0 0 0 5 0 1 55.944 56.009 3 5.3978E-05 16261 20230619_1885_Aki_TMTPro18x_K_F5 117.2 100.98 60979 46217 53381 57356 50795 57111 56068 59380 66343 71863 64256 66104 77249 57102 65693 78844 75782 75394 56301 42418 54840 57013 53149 57824 56567 60830 66986 71766 66602 67065 77831 60393 67632 78646 72407 71648 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95399000 20444 4757 19126 38782 31104 31104 1 9606 Homo sapiens 0.05516764843605415 NVLSLTNK Unmodified 887.50763 0.50763136 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348;A0A7I2V5T3;A0A7I2V5Z8 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 0 3 0 1 50.617 50.687 2 0.0086616 14443 20230619_1882_Aki_TMTPro18x_K_F3 104.01 59.053 149410 113990 129630 167450 191090 218580 215700 207770 278310 179770 197990 206790 200520 163790 165710 192490 234990 243970 137950 104820 134550 165260 194470 216790 217780 212240 276440 184190 207040 207250 202990 171990 173080 195750 224230 231150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223690000 20445 1647 19127 38783 31105 31105 1 9606 Homo sapiens 0.059377848974691005 NVLTESAR Unmodified 888.46649 0.46649483 987 P0DPI2-2;A0A0B4J2D5-2;P0DPI2;A0A140VKB0;A0A0B4J2D5;H7C1F6;H7C2G3;A0A2R8Y6K9;A0A2R8YDR7;F2Z2Q0;A0A096LP12 C21orf33 yes no 0 0 0 4.5 0.5 1 1 37.184 37.252 2 0.0031798 8384 20230619_1885_Aki_TMTPro18x_K_F5 120.15 74.139 181100 135150 170220 180510 243250 233460 236150 229140 281610 190640 260260 238610 219910 200870 228730 206460 271540 226890 167290 124140 174970 179240 246490 232000 239820 233350 283040 196350 266140 238910 226280 208670 234650 208630 259090 215440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 280620000 20446 987 19128 38784;38785 31106;31107;31108 31108 3 9606 Homo sapiens 0.017800238579980032 NVLTNTQSENER Unmodified 1403.6641 0.66408501 4271 Q8TD16;Q8TD16-2 BICD2 Protein bicaudal D homolog 2 yes no 0 0 0 2.5 0.5 1 1 36.272 36.327 2 9.7976E-12 8219 20230619_1881_Aki_TMTPro18x_K_F2 164.9 146.16 12783 11952 12808 10585 12226 15094 13377 14791 19632 17406 20533 18835 18219 19461 16592 22281 20491 18598 11831 10930 12988 10878 12800 14918 13620 15189 19667 17504 20906 19093 18622 20177 17147 22126 19555 17711 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10467000 20447 4271 19129 38786;38787 31109;31110 31109 2 9606 Homo sapiens -0.021600464606535752 NVMEEGK Oxidation (M) 821.35892 0.35891821 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258 COPB2 Coatomer subunit beta' yes no 0 1 0 2 0 1 34.25 34.307 2 0.083133 7386 20230619_1881_Aki_TMTPro18x_K_F2 68.95 19.527 27383 12423 35164 35514 53690 53563 48226 58201 39398 28706 46591 56188 38371 38159 46107 22091 58744 51850 25310 11583 35356 34166 54055 52848 48696 58310 40868 31402 47196 55135 39837 39105 47304 24206 56036 48958 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11033000 20448 3031 19130 38788 31111 31111 1784 1 9606 Homo sapiens -0.058906890677235424 NVMSAFGLTDDQVSGPPSAPAEDR Oxidation (M) 2476.1176 0.11763189 1631 Q92734;Q92734-2;A0A6Q8PFY7;Q7Z426;Q92734-3;A0A6Q8PG04;A0A6Q8PF40;Q05BK6;Q7Z427;A0A6Q8PGS4;Q8TDJ5;A0A6Q8PG00;A0A6Q8PH27;A0A6Q8PH89;A0A6Q8PFC4;Q92734-4 TFG;TFG/ALK fusion Protein TFG;Tyrosine-protein kinase receptor yes no 0 1 0 3.25 0.829 1 1 2 54.953 54.98 3 1.8243999999999999E-19 16195 20230619_1883_Aki_TMTPro18x_K_F4 146.15 132.14 7308.1 7783.7 8663.2 8942.4 8628.9 8168.8 7977.2 11505 11018 9294.3 10608 12293 8997 9956.1 11379 12071 11474 10524 6780.7 7130.2 8685.8 8932.4 8939.1 8400.1 8187.3 11455 11029 9598.7 10848 12265 9363.8 10442 11538 12010 10971 10016 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89361000 20449 1631 19131 38789;38790;38791;38792 31112;31113 31112 1055 2 9606 Homo sapiens -0.061382217770642455 NVMSAFGLTDDQVSGPPSAPAEDR Unmodified 2460.1227 0.12271727 1631 Q92734;Q92734-2;A0A6Q8PFY7;Q7Z426;Q92734-3;A0A6Q8PG04;A0A6Q8PF40;Q05BK6;Q7Z427;A0A6Q8PGS4;Q8TDJ5;A0A6Q8PG00;A0A6Q8PH27;A0A6Q8PH89;A0A6Q8PFC4;Q92734-4 TFG;TFG/ALK fusion Protein TFG;Tyrosine-protein kinase receptor yes no 0 0 0 4.5 0.5 1 1 61.526 61.552 3 1.6169E-53 18574 20230619_1885_Aki_TMTPro18x_K_F5 256.76 235.95 79398 66622 76255 81435 71996 90725 84015 80481 88960 91182 85286 80227 83264 78550 84952 93209 79899 87349 73405 61112 77707 81142 75532 90778 84177 83222 90236 91258 87575 81903 85169 81827 86128 93087 76547 83000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 599160000 20450 1631 19131 38793;38794 31114;31115 31115 2 9606 Homo sapiens -0.04893917914478152 NVMVEPHR Oxidation (M) 996.4811 0.48109903 3487 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;M0QXC9 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 1 0 4 0.816 1 1 1 28.868 28.954 3 0.0022182 5249 20230619_1882_Aki_TMTPro18x_K_F3 99.442 85.863 35377 20577 39548 39970 49646 47773 43561 47672 46908 48543 68844 81715 68029 60895 58793 47168 86906 89516 32685 19017 39972 38846 50537 47697 44414 48732 48461 49998 69643 80664 69054 62805 61427 50027 82897 84565 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32085000 20451 3487 19132 38795;38796;38797 31116;31117;31118 31116 2146 3 9606 Homo sapiens -0.017282272654938424 NVMVEPHR Unmodified 980.48618 0.48618441 3487 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0;M0QXC9 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 0 0 5 0.816 1 1 1 32.78 32.838 3 0.00075222 6719 20230619_1885_Aki_TMTPro18x_K_F5 123.16 90.801 16892 10556 16637 18575 22555 21649 16697 22554 24231 16063 23008 21939 21072 17819 21107 14349 25008 24053 15595 9737.6 17014 18128 22793 21672 17425 22789 24178 16769 23570 21867 21571 18346 21638 15041 23883 22746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56046000 20452 3487 19132 38798;38799;38800 31119 31119 1 9606 Homo sapiens -0.0048392340288501146 NVMVEPHRHEGVFICR Oxidation (M) 1994.9567 0.95671876 3487 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 1 1 7.5 0.5 1 1 35.207 35.237 4 3.0282E-08 7586 20230619_1888_Aki_TMTPro18x_K_F8 142.91 122.18 87291 43408 75132 84180 87223 76811 93363 98900 83578 94202 105420 111750 108800 88815 79531 107270 122690 130580 80425 40151 77550 81521 89638 78717 93516 99380 86619 95906 107300 111870 109550 93394 83923 108710 117030 123750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 54616000 20453 3487 19133 38801;38802 31120;31121;31122 31122 2146 3 9606 Homo sapiens -0.0009613332283606724 NVMVEPHRHEGVFICR Unmodified 1978.9618 0.96180414 3487 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R0P1;M0R2U2;M0R1H0;M0R2B0 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 0 1 8 0 1 37.824 37.81 5 1.0932E-10 8572 20230619_1888_Aki_TMTPro18x_K_F8 150.37 117.18 30557 27770 30434 27235 24911 30955 31806 35293 32179 35870 24628 29631 30732 20909 24851 30728 36539 34174 28273 25416 30828 27633 26518 31125 31698 35747 32507 36004 25925 30036 30875 22414 26049 30891 34831 32431 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132230000 20454 3487 19133 38803 31123 31123 1 9606 Homo sapiens 0.011481705397955011 NVMVSTGR Oxidation (M) 878.428 0.42800083 3493 P23258;A0A1B4Z394;A0A7P0T9G6;Q9NRH3 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 0 1 0 7.5 0.5 1 1 31.991 32.04 2 0.074473 6088 20230619_1887_Aki_TMTPro18x_K_F7 64.265 46.229 14334 9187.3 16207 16822 21124 17158 16274 15923 20259 15252 20223 20371 17240 19232 17885 11808 23622 18841 13250 8478.8 16375 16353 21375 17302 16818 16343 20394 15619 20622 20395 17757 19470 18455 12405 22513 17838 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17089000 20455 3493 19134 38804;38805 31124 31124 2161 1 9606 Homo sapiens -0.016076050481501625 NVMVSTGR Unmodified 862.43309 0.43308621 3493 P23258;A0A1B4Z394;A0A7P0T9G6;Q9NRH3 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 0 0 0 8 0 1 35.874 35.863 2 0.0053697 7830 20230619_1888_Aki_TMTPro18x_K_F8 113.71 86.744 64481 41069 60447 64868 58512 68071 60325 61782 78602 72795 81486 74268 85816 68815 62182 57925 95245 81725 59510 37826 61734 63560 61048 68410 61311 63852 79140 73050 83570 75117 86320 70655 65434 59740 90717 77420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83395000 20456 3493 19134 38806 31125 31125 1 9606 Homo sapiens -0.0036330118552996282 NVMYFGGNSDASTIK Oxidation (M) 1618.7297 0.72972174 2794 CON__Q28107 yes yes 0 1 0 7 0 1 50.42 50.501 3 0.0025141 13808 20230619_1887_Aki_TMTPro18x_K_F7 70.281 49.617 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20457 2794 19135 38807 31126 31126 1669 1 9606 Homo sapiens -0.05489393329958148 NVNHSWIER Unmodified 1153.5629 0.56285483 1769 Q4G0J3-3;A0A8I5KUI4;Q4G0J3;A0A8Q3SHG9;A0A8Q3SHN7;H0YA82;A0A8Q3SHF1;A0A8Q3SHH4;A0A8Q3WK75;A0A8I5KSZ3;A0A8I5KQG7;A0A8I5KYN2;D6RFF0;A0A8Q3SHL6 LARP7 La-related protein 7 yes no 0 0 0 6 0 1 36.18 36.241 3 5.3598E-05 8036 20230619_1886_Aki_TMTPro18x_K_F6 144.65 121.27 93611 79158 77390 92457 126940 160520 120860 128270 157970 71169 69828 75803 95745 82224 67060 90056 95737 94455 86453 72578 80847 93130 128030 156330 123250 131660 155090 75340 76939 77032 95615 85026 70400 90552 91314 89672 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113890000 20458 1769 19136 38808 31127 31127 1 9606 Homo sapiens -0.007784085820503606 NVNNEVHFFENNNFNTIANK Unmodified 2378.104 0.10397116 4468 Q9BY44-3;Q9BY44;F8WAE5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 7.5 0.5 1 1 57.028 57.081 3 3.7748E-16 16629 20230619_1888_Aki_TMTPro18x_K_F8 155.49 146.67 100220 83002 96840 107510 82715 105900 101170 100520 116340 137600 125840 124530 138940 119220 118010 143510 128100 143170 92649 76187 98522 106520 87666 107050 101450 104070 118170 136650 129220 126820 140400 124460 121080 143730 122580 135930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 156690000 20459 4468 19137 38809;38810 31128;31129 31129 2 9606 Homo sapiens -0.029956667032820405 NVNSNLITWNR Unmodified 1329.6789 0.67894722 3937 Q15645;H0YAL2 TRIP13 Pachytene checkpoint protein 2 homolog yes no 0 0 0 3 0 1 50.712 50.783 2 0.0083409 14478 20230619_1882_Aki_TMTPro18x_K_F3 92.611 79.984 122720 104200 116300 108610 98318 135350 118520 131060 134530 135510 136320 143780 155980 119240 121910 130930 135470 155310 113450 95436 118390 109760 104330 134700 118910 134240 136250 136940 140660 144700 156850 124530 125370 132730 129620 147180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192320000 20460 3937 19138 38811 31130 31130 1 9606 Homo sapiens 0.027294901979757924 NVNWEYK Unmodified 951.44503 0.4450311 1443 F5H7P7;B4DT22;A0A384MTS1;Q96BP3;D6R9Q1;B4DP34;Q96BP3-2;H0Y8N5 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes no 0 0 0 7 0 1 48.4 48.487 2 0.018534 12890 20230619_1887_Aki_TMTPro18x_K_F7 95.909 71.278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20461 1443 19139 38812 31131 31131 1 9606 Homo sapiens -0.03263361170718326 NVPGLAILLSK Unmodified 1123.6965 0.69649476 4443 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 yes yes 0 0 0 5 0 1 63.567 63.613 3 0.04354 19559 20230619_1885_Aki_TMTPro18x_K_F5 56.205 23.117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20462 4443 19140 38813 31132 31132 1 9606 Homo sapiens 0.13959437470953162 NVPHEDICEDSDIDGDYR Unmodified 2147.8702 0.87019098 3093 H7C4F6;O00629;A0A7I2YQ95;A0A7I2V340;A0A7I2V333 KPNA4 Importin subunit alpha-3 yes no 0 0 0 1 0 1 43.9 43.9 3 3.3145E-20 11813 20230619_1880_Aki_TMTPro18x_K_F1 193.8 169.26 89548 71577 90342 93560 90020 110460 83734 79857 106610 114180 115030 110170 129440 120560 101050 134870 136030 137250 82797 65715 91718 92865 93490 109690 85540 84636 107730 113500 118190 112420 130400 124740 105370 135340 129820 130330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 380890000 20463 3093 19141 38814 31133 31133 1 9606 Homo sapiens -0.1578293092502463 NVPILYTASQACLQHPDVAAYK Unmodified 2458.2315 0.23147986 1411 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;E5RJ41 CTNNA1 Catenin alpha-1 yes no 0 0 0 2 0 1 58.514 58.528 3 2.3034E-14 18017 20230619_1881_Aki_TMTPro18x_K_F2 140.63 128.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20464 1411 19142 38815 31134 31134 1 9606 Homo sapiens 0.06069337846474809 NVPLPGDAAAGHPDR Unmodified 1485.7324 0.73243935 3860 Q13585 GPR50 Melatonin-related receptor yes yes 0 0 0 3.5 0.5 1 1 39.242 39.29 3 2.0507E-05 9199 20230619_1883_Aki_TMTPro18x_K_F4 86.873 73.672 39267 32718 43143 50208 53909 56990 52053 46253 53193 58174 53072 59382 53168 45664 50613 61055 67472 61078 36343 30090 43708 49314 55053 56857 52616 48337 54176 58184 54513 59732 54166 48369 52497 61076 64350 58035 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183010000 20465 3860 19143 38816;38817 31135 31135 1 9606 Homo sapiens 0.00900242909847293 NVPNLHVMK Unmodified 1050.5644 0.56443473 3594;1322 A0A1W2PQS6;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A2R8Y6L3;S4R435;P46783;Q59GE4;Q9NQ39 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like no no 0 0 0 2.5 0.5 1 1 44.886 44.963 3 0.00085005 12119 20230619_1881_Aki_TMTPro18x_K_F2 101.11 75.167 653230 596270 567760 467490 750700 1115500 713320 689530 1276600 104540 99078 132040 126210 102510 206930 123110 135900 112660 603800 544850 586410 491630 767980 1068600 737540 717820 1217800 140710 158520 132230 132340 107780 204600 123090 130560 107200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 967630000 20466 1322;3594 19144 38818;38819 31136;31137 31136 2 9606 Homo sapiens 0.04117509182333379 NVPNWHR Unmodified 921.45693 0.45693319 2668 B5MDF5;P62826;J3KQE5;F5H018;B4DV51;Q96QB7;Q0EFC9 RAN;TC4 GTP-binding nuclear protein Ran yes no 0 0 0 4.57 2.44 1 1 1 1 1 1 1 35.057 35.104 3 0.00062277 7976 20230619_1880_Aki_TMTPro18x_K_F1 154.11 99.588 687660 569560 655260 636410 794880 799380 726120 747060 845020 803240 884090 855420 851340 772380 799620 824050 978820 829460 635660 522040 670180 639630 812360 795140 739990 768100 855720 810490 903600 863270 867950 801960 823960 827650 933760 788320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5776800000 20467 2668 19145 38820;38821;38822;38823;38824;38825;38826 31138;31139;31140 31138 3 9606 Homo sapiens -0.006936996368722248 NVPPGLDEYNPFSDSR Unmodified 1805.822 0.82204222 2015 A8K2G0;O15126;O15126-2;A0A087WZA6;B4DP10 SCAMP1 Secretory carrier-associated membrane protein 1 yes no 0 0 0 5 0 1 60.153 60.205 2 4.6416E-09 17980 20230619_1885_Aki_TMTPro18x_K_F5 148.41 122.29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20468 2015 19146 38827 31141 31141 1 9606 Homo sapiens -0.048635919921252935 NVPSVNR Unmodified 784.41915 0.4191507 2593 E7ER68;B4DUD8;Q658Y4;H0YBR6 FAM91A1 Protein FAM91A1 yes no 0 0 0 7 0 1 33.174 33.261 2 0.037414 6623 20230619_1887_Aki_TMTPro18x_K_F7 91.906 48.906 16356 7409.8 15977 16316 20342 26457 19074 22438 25440 16010 23333 22093 17725 21113 24013 9871 21762 23926 15079 6872.5 16334 15859 20794 25858 19507 23012 25425 16733 23795 22108 18604 21209 24104 10937 20858 22569 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5487900 20469 2593 19147 38828 31142 31142 1 9606 Homo sapiens 0.018317893776611527 NVPVITGSK Unmodified 913.52328 0.52328142 2035 Q6FHP5;A8K401;P35232;Q6PUJ7;Q53FV0;C9JW96;E7ESE2;E9PCW0;P35232-2 PHB;HEL-S-54e Prohibitin yes no 0 0 0 1.5 0.5 1 1 46.377 46.416 2 8.7916E-05 12867 20230619_1880_Aki_TMTPro18x_K_F1 157.59 101.58 296440 245040 275800 292270 396770 384730 393960 378840 494370 369070 440080 404970 483290 358810 377890 406230 473020 403010 273970 224740 283800 292530 402230 382030 400250 387100 495380 374880 455590 408140 486590 374370 391480 407250 451180 383070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 797050000 20470 2035 19148 38829;38830 31143;31144 31143 2 9606 Homo sapiens 0.06306071414530834 NVPYGNIQSR Unmodified 1146.5782 0.57817054 1287 B7Z462;G3V1S6;B7Z6K2;A0A1L7NY50;A0A1L7NY41;Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase;Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes no 0 0 0 4.5 3.5 1 1 40.184 40.179 2 2.4624E-05 9572 20230619_1888_Aki_TMTPro18x_K_F8 158.08 129.38 86165 68485 78228 87458 95591 99493 81368 84695 97372 118990 143770 147050 144710 125000 124950 135380 160770 160500 79599 62863 80422 86897 97535 99379 83426 88471 100220 119250 145360 147240 146740 130230 129430 137260 153480 152180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147140000 20471 1287 19149 38831;38832 31145;31146 31146 2 9606 Homo sapiens 0.010744582151346549 NVPYVFVR Unmodified 992.54435 0.54435122 1527 A0A3B3IUA2;Q6FHM6;B1AHD1;P55769;A0A3B3IRU2;A0A3B3ISH1 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 0 0 0 3 0.816 1 1 1 52.421 52.46 2 0.001101 15080 20230619_1883_Aki_TMTPro18x_K_F4 148.98 122.02 349000 304070 295180 314810 334070 414210 337240 333030 415720 206130 198270 171870 184780 161000 274420 214080 221930 185200 322430 278470 305080 318420 344640 409420 342120 342430 409770 214570 213100 175930 193390 169210 274230 212870 212590 176350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 629730000 20472 1527 19150 38833;38834;38835 31147 31147 1 9606 Homo sapiens 0.047780815140413324 NVQAEEMVEFSSGLK Oxidation (M) 1682.7822 0.78215124 3504 V9HW26;P25705;P25705-2;P25705-3;K7EK77;B4DGW3;K7ERX7;K7EJP1;K7EQH4 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 1 0 4 0.816 1 1 1 53.193 53.243 3 0.0014353 15480 20230619_1883_Aki_TMTPro18x_K_F4 71.98 61.923 52110 44997 53353 61107 55850 67049 67654 64116 60818 65947 68275 53891 77359 61916 66044 69181 69329 75916 48210 41317 54196 60444 58135 67254 67320 65757 62675 66186 70005 55598 78091 64039 67557 69772 66348 72009 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101600000 20473 3504 19151 38836;38837;38838 31148 31148 2170 1 9606 Homo sapiens -0.03192854987037208 NVQAEEMVEFSSGLK Unmodified 1666.7872 0.78723662 3504 V9HW26;P25705;P25705-2;P25705-3;K7EK77;B4DGW3;K7ERX7;K7EJP1;K7EQH4 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 5 1 1 1 60.847 60.878 3 6.3847E-14 18460 20230619_1886_Aki_TMTPro18x_K_F6 172.85 151.6 91991 80351 96281 97341 90358 98055 106470 101730 110080 117330 117350 104330 112500 99521 118170 125510 114710 114660 85130 73689 97369 96945 94710 99202 106550 104100 112270 117330 119790 106410 115260 104170 119920 125090 109780 109020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 213870000 20474 3504 19151 38839;38840 31149;31150 31150 2 9606 Homo sapiens -0.019485511244056397 NVQLLSQFVSPFTGCIYGR Unmodified 2185.099 0.099009123 4725 Q9Y3D5 MRPS18C 28S ribosomal protein S18c, mitochondrial yes yes 0 0 0 8 0 1 65.074 65.093 3 0.010486 20005 20230619_1888_Aki_TMTPro18x_K_F8 57.989 52.616 5804 5731.3 6886.4 6223.9 6805.5 7852.6 6013.2 7280.8 9254.3 6440.9 10580 10725 9690.4 9430.4 13593 10364 10593 13440 5382 5248.6 6899.4 6270.3 7060.6 7804.6 6216.4 7453 9280.4 6691 10762 10658 10108 9815.8 13572 10582 10184 12722 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12984000 20475 4725 19152 38841 31151 31151 1 9606 Homo sapiens 0.05386357900351868 NVQLQENEIR Unmodified 1241.6364 0.6364137 685 A0A024RBP2;F8W0W8;P36873;P36873-2;Q9UPN1;F8VYE8;F8VR82;A0A087WYY5 PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit yes no 0 0 0 2.5 0.5 1 1 41.293 41.361 2 1.109E-09 10175 20230619_1882_Aki_TMTPro18x_K_F3 209.39 157.39 276340 212430 224150 253150 262200 283120 276250 267530 347680 300720 321380 330260 363860 313630 287010 384210 371680 347750 255030 194880 232790 252710 269910 283710 279860 275310 349020 303200 332800 333490 366480 327700 298400 382650 354630 330770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 409450000 20476 685 19153 38842;38843 31152;31153 31153 2 9606 Homo sapiens 0.025260950697429507 NVQLSLLTER Unmodified 1171.6561 0.65608651 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2;Q05D78 MRE11A Double-strand break repair protein MRE11A yes no 0 0 0 8 0 1 53.701 53.772 2 0.0014151 15168 20230619_1888_Aki_TMTPro18x_K_F8 125.18 75.591 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20477 229 19154 38844 31154 31154 1 9606 Homo sapiens 0.07712471080526484 NVQLTENEIR Unmodified 1214.6255 0.62551466 3704 P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;E9PMD7;B3KXM2 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase yes no 0 0 0 3 0.816 1 1 1 43.002 43.066 2 2.4839E-09 10979 20230619_1882_Aki_TMTPro18x_K_F3 217.5 153.24 354470 290940 327190 321860 359020 402450 381920 364140 450620 437000 465330 460810 507040 380010 412760 499840 519190 490010 327570 266650 335100 323690 371200 400050 385870 376580 455810 438520 478430 464080 511420 401210 427720 499550 495520 465620 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 836980000 20478 3704 19155 38845;38846;38847 31155;31156;31157 31156 3 9606 Homo sapiens 0.026786926954628143 NVQQQLDATSR Unmodified 1258.6266 0.6265773 2577 B4DRF3;Q9BVW5 TIPIN TIMELESS-interacting protein yes no 0 0 0 5 0 1 37.827 37.919 2 0.0016251 8693 20230619_1885_Aki_TMTPro18x_K_F5 96.113 70.219 13456 9736 7902.9 12074 11235 11433 10360 9794.3 15897 14072 13948 13798 13754 11897 11548 15529 15583 15203 12391 8937.4 8562.7 11985 11402 11578 10660 10239 15802 13992 14388 13956 13945 12526 12026 15516 14868 14445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24466000 20479 2577 19156 38848 31158 31158 1 9606 Homo sapiens 0.0076090706436389155 NVRPAEVR Unmodified 939.52501 0.52501276 4273 Q8TEM1;Q8TEM1-2 NUP210 Nuclear pore membrane glycoprotein 210 yes no 0 0 1 5.5 0.5 1 1 27.801 27.853 3 0.0036399 5040 20230619_1886_Aki_TMTPro18x_K_F6 101.54 73.8 41846 27852 41723 26617 20403 18221 13827 15658 15368 22078 27685 22143 22294 19317 28533 20473 35630 15768 38647 25517 41947 26929 22681 19048 14458 16364 16082 21959 27562 22392 23227 20070 29242 20325 33885 15099 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7659100 20480 4273 19157 38849;38850 31159 31159 1 9606 Homo sapiens 0.052831252231385406 NVSEELDR Unmodified 960.45124 0.45123869 3931 Q15393;A8K6V3;B3KQH1;B3KM77;Q15393-3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 1 0 1 37.875 37.875 2 0.00015018 9138 20230619_1880_Aki_TMTPro18x_K_F1 173.37 97.634 133530 88397 104360 131780 137220 189680 147700 130080 231760 156330 185040 215800 193150 178980 156390 162850 206150 200090 123100 81343 109170 130120 140750 185880 150750 137770 229190 158640 192540 214950 195290 184920 162440 166010 196720 189680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 241750000 20481 3931 19158 38851 31160 31160 1 9606 Homo sapiens -0.030568877298605912 NVSEELDRTPPEVSK Unmodified 1698.8424 0.84244331 3931 Q15393;A8K6V3;B3KQH1;B3KM77;Q15393-3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 1 3.5 0.5 1 1 45.438 45.498 3 3.4689E-05 12045 20230619_1882_Aki_TMTPro18x_K_F3 100.59 82.491 192880 165900 173030 184560 197950 208250 207190 208210 235530 223090 243440 202970 245760 202170 219580 244310 256250 247450 178260 152030 177850 185230 203880 208860 209260 213070 238630 224100 249210 207150 249480 210870 225900 244930 244770 235030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 464590000 20482 3931 19159 38852;38853 31161 31161 1 9606 Homo sapiens 0.020975786676899588 NVSGGYLVLYK Unmodified 1211.655 0.65502388 1529 A0A3B3IUB9;A0A8V8TR92;A0A8V8TQB4;Q9NR09 BIRC6 Baculoviral IAP repeat-containing protein 6 yes no 0 0 0 3 0 1 57.738 57.771 3 0.018114 17541 20230619_1882_Aki_TMTPro18x_K_F3 62.14 37.286 20832 21921 23266 22264 22799 20153 23576 24912 25759 23163 24398 24986 26656 18965 26213 26735 23263 25426 19316 20060 23411 22453 23692 20675 23806 25074 26063 23551 25205 25086 27083 20186 26504 26666 22301 24156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5491000 20483 1529 19160 38854 31162 31162 1 9606 Homo sapiens 0.05766256711604001 NVSLGNVLAVAYATQR Unmodified 1674.9053 0.90531834 2654 B4E357;Q5JPB8;Q53HL4;Q53GT4;G3V1D3;G3V180;Q9NY33-4;Q9NY33 DKFZp686O1117;DPP3 Dipeptidyl peptidase 3 yes no 0 0 0 5.5 0.5 1 1 62.488 62.537 3 0.00017981 19239 20230619_1886_Aki_TMTPro18x_K_F6 90.654 69.872 36617 28912 36888 41686 48869 42508 33903 35824 43268 39851 42162 42412 46902 45178 43204 50122 46136 45615 33854 26575 37633 41036 49338 42793 35362 37177 43529 40162 43520 43052 47581 46740 44197 50023 44111 43375 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223020000 20484 2654 19161 38855;38856 31163 31163 1 9606 Homo sapiens 0.09486189246422327 NVSVMTMIFK Unmodified 1168.5984 0.59843698 1528 Q13144;A0A3B3IUB1;A0A3B3IRP4;A0A3B3ITG6;A0A3B3ISX3;A0A3B3ISM8;A0A3B3IUF2;A0A3B3IS56;A0A3B3ISS1;A0A3B3ITQ2;A0A3B3ISV1;A0A3B3ISI2;A0A3B3IST9;A0A3B3ITK8 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes no 0 0 0 5 0 1 63.222 63.268 3 4.9298E-05 19404 20230619_1885_Aki_TMTPro18x_K_F5 113.63 66.738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20485 1528 19162 38857 31164 31164 1 9606 Homo sapiens 0.020881695590787785 NVSVSWRPR Unmodified 1099.5887 0.58867565 2271 B2R9D9;Q96EK9 KTI12 Protein KTI12 homolog yes no 0 0 1 6 0 1 39.739 39.828 3 0.0024284 9488 20230619_1886_Aki_TMTPro18x_K_F6 76.572 39.478 51822 32874 43762 44031 48742 48945 51615 51185 74081 40125 34357 36110 43032 34068 40590 41727 45956 34654 47789 30220 45196 43620 50334 49173 52534 51837 72528 41093 37514 36779 43539 35619 41613 41417 43841 33031 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12791000 20486 2271 19163 38858 31165 31165 1 9606 Homo sapiens 0.04286485660236394 NVTAIQGPGGK Unmodified 1040.5615 0.56145784 2501 B4DJB4;H0YL72;B4DSY4;Q53GF8;P50213;H0YM64;H0YKD0;H0YLI6;H0YMU3 IDH3A Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 4.5 3.5 1 1 42.984 42.984 2;3 0.00027437 10735 20230619_1888_Aki_TMTPro18x_K_F8 113.62 93.845 39183 31920 42406 48187 54301 53462 53892 53483 64988 52705 61412 56672 61820 51972 46141 50665 68329 60342 36255 29352 43021 47372 55401 53657 54694 54617 65394 53454 63138 57202 62352 53715 48438 51470 65107 57240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59447000 20487 2501 19164 38859;38860 31166;31167 31167 2 9606 Homo sapiens 0.042799573291858906 NVTDVVNTCHDAGISK Unmodified 1728.8101 0.81009732 4728 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 0 5.5 0.5 1 1 45.474 45.556 3 2.9642E-15 11901 20230619_1886_Aki_TMTPro18x_K_F6 191.21 164.18 218120 175820 202650 222480 252380 271780 261820 254190 282100 257190 269370 280020 305900 248780 230310 309550 310840 346740 201550 161360 208030 221470 258430 270680 264010 260970 285750 260510 278580 282240 307460 260980 240420 311910 296880 328810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 519850000 20488 4728 19165 38861;38862 31168;31169;31170 31170 3 9606 Homo sapiens -0.025155320069188747 NVTDVVNTCHDAGISKK Unmodified 1856.9051 0.90506034 4728 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog yes yes 0 0 1 8 0 1 43.741 43.751 4 7.2257E-14 10972 20230619_1888_Aki_TMTPro18x_K_F8 165.17 147.57 68266 65285 72512 73736 94702 84779 100590 91578 65989 90260 92381 78027 76364 60802 90547 57502 64176 49666 63223 59814 73643 73953 96489 85114 100010 93050 70339 90822 92803 79158 79031 63130 90182 57533 61557 47309 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78299000 20489 4728 19166 38863 31171 31171 1 9606 Homo sapiens 0.010884014642442708 NVTELNEPLSNEER Unmodified 1642.7798 0.77984305 3701 P61981;B3KNB4;B4DE78;B4DHC4 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes no 0 0 0 2 0.816 1 1 1 46.187 46.239 2 2.6688999999999998E-46 12776 20230619_1880_Aki_TMTPro18x_K_F1 305.2 258.8 221030 187020 182140 216670 184710 205590 208190 216420 234760 256130 268360 266410 302010 249410 253450 311140 288220 291130 204130 171460 188510 216260 192420 209040 209450 221430 239130 257000 275190 269520 304810 261100 260820 310390 275450 276720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1650299999.9999998 20490 3701 19167 38864;38865;38866 31172;31173 31172 2 9606 Homo sapiens -0.015835674004392786 NVTHIDQALQEAHR Unmodified 1630.8176 0.81756596 4033 Q5HYK3;F8VVX6;B4DP72 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes no 0 0 0 5 0 1 38.754 38.845 4 4.0225E-16 9042 20230619_1885_Aki_TMTPro18x_K_F5 162.37 138.69 29015 17586 25490 30560 35095 38450 33342 42624 44346 26880 33905 25634 27735 25325 29126 23535 32098 24009 26759 16222 26364 29879 35671 38348 34066 42796 44068 27995 34951 26108 28587 26034 29723 23731 30626 22828 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86817000 20491 4033 19168 38867 31174 31174 1 9606 Homo sapiens 0.02738988375676854 NVTLCGHLHHGK Unmodified 1371.683 0.68298674 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;K7EIT3 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 2 0 1 32.131 32.191 4 0.00028666 6559 20230619_1881_Aki_TMTPro18x_K_F2 98.942 84.912 22505 16860 24220 23885 36926 41091 30878 35480 41589 25112 29295 29235 25917 22342 30138 19351 32239 26138 20812 15497 24653 23760 37204 40099 31810 36325 41221 26090 30495 29249 26769 23123 30624 19913 30783 24776 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31393000 20492 2436 19169 38868 31175 31175 1 9606 Homo sapiens 0.012012564200404086 NVTLNPDPNEIK Unmodified 1352.6936 0.69359423 3872 Q13907;A0A8Q3WKR8;Q13907-2 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 yes no 0 0 0 4.5 0.5 1 1 50.509 50.562 3 1.3762E-05 13985 20230619_1885_Aki_TMTPro18x_K_F5 131.13 108.66 160480 114710 139580 157250 106080 123590 124300 130220 154670 134910 128240 113020 141780 118870 113210 181210 143590 125810 148110 105420 143110 154840 113480 127650 125290 132760 154770 135480 133280 116120 142950 125660 117680 177790 136970 120150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139450000 20493 3872 19170 38869;38870 31176 31176 1 9606 Homo sapiens 0.03135517555460865 NVTLPAVFK Unmodified 987.57532 0.57531699 3558 Q59GY2;P36578;B4DMJ6;Q53G74;B4DFI6;H3BTP7;H3BU31;B4DP82 RPL4 60S ribosomal protein L4 yes no 0 0 0 3.5 0.5 2 2 58.818 58.834 2;3 1.0848E-05 17780 20230619_1883_Aki_TMTPro18x_K_F4 188.66 142.98 753030 664550 696110 703140 648570 816450 752210 757890 805030 595940 498590 340790 478220 395110 633850 542680 490710 370150 696220 608670 711310 708770 681120 815610 754070 773820 804480 603670 524470 360160 496060 413630 633370 533680 470050 353840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3998099999.9999995 20494 3558 19171 38871;38872;38873;38874 31177;31178;31179 31179 3 9606 Homo sapiens 0.08103234828286077 NVTMETE Oxidation (M) 838.33785 0.33784842 3608 P49458;Q8WVW9 SRP9 Signal recognition particle 9 kDa protein yes no 0 1 0 1 0 1 35.04 35.04 2 0.046402 7996 20230619_1880_Aki_TMTPro18x_K_F1 81.297 77.444 26000 15870 30050 30327 37615 38940 36577 38077 39981 25196 36003 38448 34827 34523 37120 21671 45345 38118 24034 14660 30305 29530 38411 38678 37046 38612 40317 26581 37103 38279 35734 35055 38066 22962 43256 36056 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44740000 20495 3608 19172 38875 31180 31180 2292 1 9606 Homo sapiens -0.0877869916724876 NVTMETE Unmodified 822.34293 0.3429338 3608 P49458;Q8WVW9 SRP9 Signal recognition particle 9 kDa protein yes no 0 0 0 1 0 1 41.977 41.977 2 0.017062 10956 20230619_1880_Aki_TMTPro18x_K_F1 109.11 104.25 128270 84293 130180 136990 176050 170870 142270 183700 164240 148180 225890 280810 209720 204680 212150 148260 272940 246270 118480 77654 132770 134410 178170 170470 146260 185740 168410 155610 228550 276190 214880 210570 218650 155630 260370 232970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141090000 20496 3608 19172 38876 31181 31181 1 9606 Homo sapiens -0.07534395304639929 NVTNNLK Unmodified 801.43447 0.43446642 1096;3746 A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;P06753-7;Q8NAH0;Q5VU62;P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A2R8YEU4;A0A5F9UN72;K7EPB9 TPM3;HEL-S-82p;TPM4;HEL-S-108 Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain no no 0 0 0 4.5 3.5 1 1 39.695 39.69 2 0.0038151 9328 20230619_1888_Aki_TMTPro18x_K_F8 152.47 89.629 175460 95982 230620 211430 347460 377500 282440 373940 338790 180690 278360 309800 245550 248590 291330 120790 292060 266350 162330 88919 231340 206050 349790 368700 290450 376660 338940 197050 287330 306360 254100 251630 294500 132210 279250 251530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181220000 20497 1096;3746 19173 38877;38878 31182;31183 31183 2 9606 Homo sapiens 0.025806561748595414 NVTQIEPFCLETDRR Unmodified 1876.9101 0.91014572 4088 Q643R0;Q9ULW0;Q9ULW0-2;B3KM90;Q96FC3 HCTP4;TPX2 Targeting protein for Xklp2 yes no 0 0 1 5.5 0.5 1 1 51.488 51.564 3 6.317E-11 14584 20230619_1886_Aki_TMTPro18x_K_F6 163.23 146.35 113650 91529 113130 115310 97814 125430 131440 122750 131780 145360 139210 124710 130060 105230 115650 131650 130060 104280 105080 83998 114790 114650 103820 125960 130600 126200 134580 145020 141970 126890 132310 110590 118730 130320 124120 99433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114470000 20498 4088 19174 38879;38880 31184 31184 1 9606 Homo sapiens 0.006767053268731615 NVVACESIGR Unmodified 1103.5393 0.53934219 2135 A8K9D2;Q9H0U6 MRPL18 39S ribosomal protein L18, mitochondrial yes no 0 0 0 4.5 0.5 1 1 39.873 39.939 2 2.9529E-05 9507 20230619_1885_Aki_TMTPro18x_K_F5 172.28 136.93 102240 104870 81608 105310 114990 131080 138190 135820 158180 129860 136910 136520 150840 125690 101730 157270 167110 139600 94531 95960 85305 106690 117510 130740 138510 138240 159080 131820 142020 138000 151230 131660 108210 156390 159060 132880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131110000 20499 2135 19175 38881;38882 31185 31185 1 9606 Homo sapiens -0.008285904109015974 NVVAECLGK Unmodified 988.50117 0.50116577 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 6.5 0.5 1 1 48.566 48.649 3 0.0018717 12962 20230619_1887_Aki_TMTPro18x_K_F7 91.265 79.534 176810 139850 155400 140010 175600 154130 166530 159010 207470 219720 171620 167090 232800 162010 127550 268740 245520 248370 163290 128080 159780 141720 180360 155110 169690 163680 207900 217210 180270 171970 230570 173140 138840 266710 233790 236100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 310850000 20500 2126 19176 38883;38884 31186 31186 1 9606 Homo sapiens 0.006455236744500326 NVVAVGTGGR Unmodified 928.50903 0.50902834 4316 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 0 0 7.5 0.5 1 1 36.768 36.795 2 0.00022554 8171 20230619_1888_Aki_TMTPro18x_K_F8 136.57 104.1 35716 27724 34643 35884 48497 49163 43094 43643 69607 45990 47109 50485 49054 44334 43106 40368 60928 53572 33007 25454 35493 35737 49153 48586 44553 45016 68452 46552 49486 50802 49770 45734 44899 41384 58072 50770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26831000 20501 4316 19177 38885;38886 31187 31187 1 9606 Homo sapiens 0.04191418986249573 NVVDSSQKPTPSAR Unmodified 1484.7583 0.75831975 1719;1783 A0A7R6KYT5;E9PR05;A0A3B3ITZ1;A0A3B3ISN4;H7C5V8;H7C5W4;A0A8I5KTQ4;Q1HA41;A0A4D6WN96;A0A4D6WLI1;B3W6H7;A0A8I5KXR3;Q03164-2;Q03164;Q03164-3 KMT2A;MLL-MAML2;TET1-MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 no no 0 0 1 8 0 1 36.421 36.407 3 1.0513E-11 8017 20230619_1888_Aki_TMTPro18x_K_F8 180.95 151.65 39728 29255 37300 39405 43837 47097 39182 45238 52739 46112 50112 39274 50590 46766 40074 43950 51865 41858 36694 26877 38197 39056 44913 46993 40215 46338 52844 46377 51467 40473 51152 47834 41601 44095 49440 39816 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36000000 20502 1719;1783 19178 38887 31188 31188 1 9606 Homo sapiens 0.0353309236147652 NVVHELR Unmodified 865.477 0.47699993 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4.5 0.5 1 1 32.093 32.163 2 0.048736 6455 20230619_1885_Aki_TMTPro18x_K_F5 86.794 40.423 20938 15303 20904 20334 21881 22055 23269 25359 26511 19415 25599 25100 24786 20934 20569 20507 29119 23966 19348 14057 21247 20151 22673 22248 23490 25514 26755 20117 26263 25088 25130 21710 21458 20812 27742 22746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43608000 20503 3881 19179 38888;38889 31189 31189 1 9606 Homo sapiens 0.0388805130307901 NVVLPTETEVAPAK Unmodified 1466.7981 0.7980593 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;B4DM10;Q6NX68;A0A024R2V2;A0A024R2S1;Q05D06 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 0 5 0.816 1 1 1 52.664 52.722 3 1.0004E-08 14916 20230619_1885_Aki_TMTPro18x_K_F5 154.47 125.14 67669 56114 57376 66556 56705 62596 67978 66133 69302 68596 76351 74405 83163 66815 74051 82997 79538 78997 62498 51461 59188 66312 59269 63690 67938 67407 70805 69363 78294 75053 84198 70036 75812 82899 76045 75076 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 319620000 20504 2902 19180 38890;38891;38892 31190 31190 1 9606 Homo sapiens 0.08333219312203255 NVVQSEAR Unmodified 901.46174 0.4617438 2358 B3KNM8;B4E2X3;C4B4C6;B3KNI0;Q8N6R0-1;Q8N6R0-3;Q8N6R0-4;Q8N6R0;B3KM50 feat;METTL13 Methyltransferase-like protein 13 yes no 0 0 0 2.5 0.5 1 1 30.668 30.743 2 0.0069308 5888 20230619_1882_Aki_TMTPro18x_K_F3 109.11 22.316 25247 19709 31238 33459 45241 52649 36684 37696 41738 25292 40971 39128 30064 31157 39015 24480 47468 37132 23384 18154 31462 32872 45665 51403 37643 39208 42127 26685 41599 38831 31504 32032 39895 25468 45264 35172 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 16293000 20505 2358 19181 38893;38894 31191 31191 1 9606 Homo sapiens 0.007071397152344616 NVVTIFSAPNYCYR Unmodified 1702.8137 0.81372614 1200 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;P67775;B3KUN1;A0A8V8TQA1;Q6I9T8;A0A8V8TRB3;B3KQ51;A0A8V8TQU8;P67775-2;H0YC23 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes no 0 0 0 4.5 0.5 1 1 60.097 60.124 3 3.8279E-17 17926 20230619_1885_Aki_TMTPro18x_K_F5 215.51 207.12 220580 222100 233180 219600 194550 248880 223720 240860 272960 228180 193910 207760 218390 175510 252350 247450 223930 226730 204350 203220 235190 222560 206230 249300 225490 246200 272120 230730 203960 210760 223680 185950 254410 246370 214550 215560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 977980000 20506 1200 19182 38895;38896 31192 31192 1 9606 Homo sapiens -0.009568174423975506 NVVTVDELR Unmodified 1043.5611 0.56112349 4466 Q9BXW7-2;Q9BXW7 CECR5 Cat eye syndrome critical region protein 5 yes no 0 0 0 4 0 1 46.298 46.341 2 0.0025361 12334 20230619_1883_Aki_TMTPro18x_K_F4 105.52 33.294 173710 156260 185990 179170 189010 181090 190130 188280 193340 211330 221890 167620 187180 158610 223410 177270 161840 153540 160820 143210 187880 179180 195830 183270 191840 192450 198000 210960 224520 171970 193740 164910 222890 176700 155380 146110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139970000 20507 4466 19183 38897 31193 31193 1 9606 Homo sapiens 0.04108537609317864 NVVVAGR Unmodified 713.41842 0.41842242 1651 A0A7I2V2U6;B2R7W0;P13995;P13995-2;B8ZZU9;A0A7I2YQD4;B4DY35;A0A024RDE0;Q9H903-3;Q9H903-1;Q9H903-5;Q9H903 MTHFD2;MTHFD2L Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Probable bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase 2;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes no 0 0 0 7 0.816 1 1 1 33.561 33.623 2 0.040249 6961 20230619_1888_Aki_TMTPro18x_K_F8 81.381 38.608 93418 53132 113970 99685 131040 159710 112580 118360 143610 59323 84850 87740 72765 64197 128090 44874 99711 85032 86374 49082 114240 97548 134380 155850 115550 122170 141900 64161 89426 86969 77296 66009 127230 47926 95575 80392 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51124000 20508 1651 19184 38898;38899;38900 31194;31195 31195 2 9606 Homo sapiens 0.05024994728614729 NVVVFDK Unmodified 819.44905 0.44905385 4685 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 7.5 0.5 1 1 50.724 50.801 3 0.0082469 13950 20230619_1887_Aki_TMTPro18x_K_F7 91.041 56.963 148960 130530 147840 152550 163840 165000 170450 164190 202690 179310 219210 204090 189770 165070 194300 189850 194820 170410 137790 119670 150530 152450 169000 165960 172480 168230 205170 181190 222750 204800 194830 172790 197490 189350 186230 162150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109330000 20509 4685 19185 38901;38902 31196;31197 31196 2 9606 Homo sapiens 0.03210728323006151 NVVVVDGVR Unmodified 955.54508 0.5450795 3658 P55084-2;P55084;B4DY96;B5MD38;F5GZQ3;D6W539;C9JEY0;C9JE81;C9K0M0 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 5 0.816 1 1 1 43.124 43.197 2 0.00034924 10844 20230619_1885_Aki_TMTPro18x_K_F5 138.98 96.996 483170 393550 420960 490910 615790 607910 639330 633260 753770 618640 697470 636430 674750 579360 599400 738580 772060 720480 446290 361120 436190 489280 624500 606550 646460 644630 758700 626780 716770 643910 686050 607890 621120 738210 736680 684700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 812730000 20510 3658 19186 38903;38904;38905 31198;31199 31198 2 9606 Homo sapiens 0.06552876163095789 NVYSANQK Unmodified 922.45084 0.45084476 4102 Q6FHZ7;Q99541;B4DJK9;B4DNH6 ADFP;PLIN2 Perilipin;Perilipin-2 yes no 0 0 0 8 0 1 37.195 37.181 2 0.016588 8365 20230619_1888_Aki_TMTPro18x_K_F8 98.392 74.057 7732.3 2473.6 8024.6 9243.3 11986 14341 7440.9 12619 10068 6810.3 6664.9 8263.2 7290.9 6882.2 7252 3952.6 9447.1 7350.1 7124.8 2329 8192.8 8827.2 12029 14053 7860.6 12836 9971.2 7240.9 7037.5 8265.4 7428 6991.4 7475.8 4221.9 9003.2 6952.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4354900 20511 4102 19187 38906 31200 31200 1 9606 Homo sapiens -0.013482626590530344 NVYSSSR Unmodified 811.38243 0.38243085 1114 Q5JRI1;Q53GD7;A0A0S2Z504;O75494-5;O75494-4;O75494-6;O75494-3;O75494-2;O75494;B3KNY6 SRSF10 Serine/arginine-rich splicing factor 10 yes no 0 0 0 6 0.816 1 1 1 29.467 29.537 2 0.019942 5566 20230619_1885_Aki_TMTPro18x_K_F5 105.25 73.96 10594 6738.8 16744 14830 24455 20372 18614 25265 15388 7060.8 9739.8 11613 7472.6 6315.5 15047 3701.6 12923 8794 9829.3 6238 16594 14381 24554 20285 19026 24960 15613 8241.4 10192 11400 8060 6555.2 14984 4084.4 12356 8313.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13765000 20512 1114 19188 38907;38908;38909 31201 31201 1 9606 Homo sapiens -0.0308050723889437 NVYTEIK Unmodified 865.45453 0.45453316 1524 Q14643;Q14643-7;A0A3B3ITU8;Q14643-5;Q14643-6;Q14643-8;Q14643-2;Q14643-3;A0A3B3IU04;Q14643-4;A0A3F2YNW8;A0A3B3IRP0;A0A3B3ITQ1;A0A8C8KBY2;A0A3B3IU05;A0A3B3IU13;Q59ES2;Q14571;Q14573 ITPR1;ITPR2;ITPR3 Inositol 1,4,5-trisphosphate receptor type 1;Inositol 1,4,5-trisphosphate receptor type 2;Inositol 1,4,5-trisphosphate receptor type 3 yes no 0 0 0 6 0 1 46.414 46.497 2 0.06399 12353 20230619_1886_Aki_TMTPro18x_K_F6 83.265 37.547 50265 41438 45963 61485 62090 67077 61084 60405 75575 66977 66847 63394 71271 53298 53977 68867 71339 63636 46448 38094 47387 60465 63209 67233 62073 62353 75822 67250 69141 64190 71746 56166 56229 68620 68035 60525 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30054000 20513 1524 19189 38910 31202 31202 1 9606 Homo sapiens 0.016424071148207986 NWADVQSQLR Unmodified 1215.5996 0.59963426 1375 B4DRA5;B4DJW8;A0A2R8YFH5;Q15437;Q5QPE1;B4DS04 SEC23B Protein transport protein Sec23B yes no 0 0 0 8 0 1 50.268 50.344 2 1.4712E-13 13659 20230619_1888_Aki_TMTPro18x_K_F8 226.09 180.08 199770 164370 169950 192510 167110 204100 221370 208660 245680 161440 146710 136530 153460 123380 188310 166690 149240 148600 184500 150730 175270 192280 175490 205570 220680 211630 244700 165070 155530 139390 158030 130030 188600 165880 143170 141330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72248000 20514 1375 19190 38911 31203;31204 31203 2 9606 Homo sapiens 0.0004584324383358762 NWASGHDLQGK Unmodified 1211.5683 0.56833414 3346 Q6FG42;Q32Q14;O95182;Q6IB89;M0R0N0;M0R1K9 NDUFA7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes no 0 0 0 7 0 1 41.217 41.288 3 0.00031098 9789 20230619_1887_Aki_TMTPro18x_K_F7 101.72 82.939 30976 26544 30377 34805 42069 48137 40372 38334 45910 31232 40428 34143 36591 29642 33369 30599 39044 37911 28647 24365 31117 34625 42744 47426 40959 39652 46180 32070 41523 34405 37308 30795 34284 31154 37294 35935 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22921000 20515 3346 19191 38912 31205 31205 1 9606 Homo sapiens -0.028987297902631326 NWFGLPGR Unmodified 945.48209 0.48208531 2802 CON__Q3ZBS7 yes yes 0 0 0 4.5 0.5 1 1 57.588 57.619 2 0.0026014 16880 20230619_1885_Aki_TMTPro18x_K_F5 124.12 98.566 + 146270 119580 156890 230580 325330 443380 256580 236490 582180 755580 1256800 1927500 589930 987660 886430 756830 1168600 1738900 135330 110330 161620 225950 324090 427120 272890 270290 600640 770700 1233000 1867900 640650 1035800 911280 819580 1119300 1639200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3949699999.9999995 20516 2802 19192 38913;38914 31206;31207 31207 2 9606 Homo sapiens 0.0071635516571859625 NWQYQETIK Unmodified 1208.5826 0.58258722 3908 Q15008;Q15008-4;B3KT66;Q15008-3;Q15008-2 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 7 0 1 49.544 49.628 3 6.1119E-05 13411 20230619_1887_Aki_TMTPro18x_K_F7 143.7 111.86 213530 168660 212250 232820 229300 260600 250710 249610 281730 287150 279990 259530 302680 248920 262030 280460 302670 295520 197400 154940 216130 230150 237470 261090 252510 256740 285310 287380 288180 264400 306230 258900 269500 282130 289150 280550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212720000 20517 3908 19193 38915 31208 31208 1 9606 Homo sapiens -0.013360773619751853 NWSQCVELAR Unmodified 1261.5874 0.58735502 1889 A1LT96;A0AVT1;B3KSS1;A0AVT1-2 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 0 7.5 0.5 1 1 48.92 48.997 2 0.0054244 13121 20230619_1887_Aki_TMTPro18x_K_F7 89.317 83.711 148090 126260 136730 155890 143300 152240 152280 159870 156200 184620 170120 167470 191320 164110 162230 203610 181170 194920 136890 115820 140040 154960 148530 154430 153210 163440 159670 184670 174800 170720 193220 171490 166760 203370 173250 185180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71730000 20518 1889 19194 38916;38917 31209 31209 1 9606 Homo sapiens -0.03297516490852104 NWVQTLRPVSAK Unmodified 1397.7779 0.77793298 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 1 6 0 1 50.382 50.459 3 1.579E-05 14105 20230619_1886_Aki_TMTPro18x_K_F6 133.48 108.6 321880 302220 313570 295660 302030 388050 346420 330240 408880 313470 283570 263590 302820 249880 323710 373640 322820 240970 297840 276570 319020 300550 316350 384080 348580 340880 407820 316460 297660 269670 309470 264610 329010 365960 308310 230580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135290000 20519 1552 19195 38918 31210 31210 1 9606 Homo sapiens 0.09495513162892166 NWVVTGADDMQIR Unmodified 1503.714 0.71401209 3031 H0Y938;H0YAC7;P35606-2;P35606;B4E2C9;A0A7I2V3G0;A0A7I2YQF9;D6R997;D6RBZ7;D6RCL6;D6RBG7;D6RBT6 COPB2 Coatomer subunit beta' yes no 0 0 0 5.5 0.5 1 1 56.307 56.375 3 3.6885E-06 16618 20230619_1886_Aki_TMTPro18x_K_F6 131.32 105.87 71768 57413 69986 71795 65906 81710 77181 76615 91180 70380 69923 69741 69773 64961 69360 82288 76351 85957 66339 52687 71205 71457 69172 81728 77596 78458 91188 71490 72745 70703 71255 68069 71000 82576 73051 81568 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78285000 20520 3031 19196 38919;38920 31211;31212 31212 2 9606 Homo sapiens -0.017696350563937813 NWVVVGGLNTHYR Unmodified 1513.779 0.77899561 4320 Q96A35;X6RJ73;X6RHI2 MRPL24 39S ribosomal protein L24, mitochondrial yes no 0 0 0 4.5 0.5 1 1 50.177 50.232 3 2.1429E-08 13851 20230619_1885_Aki_TMTPro18x_K_F5 136.3 121.61 51112 43555 41494 47012 46111 46414 52948 49441 72891 59038 59015 60938 65695 63455 54852 74062 67783 72891 47200 39905 43052 47206 47736 47082 53575 50570 72541 59257 61495 61882 66395 65899 56791 74134 64764 69226 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102660000 20521 4320 19197 38921;38922 31213 31213 1 9606 Homo sapiens 0.04265727531810626 NYAAALETFTEGQK Unmodified 1541.7362 0.73618733 2079 A8K5T7;Q9Y2Z0;B4DYC6;Q9Y2Z0-2;A8K7W3;Q9P1S2 SUGT1 Suppressor of G2 allele of SKP1 homolog yes no 0 0 0 6 0 1 61.487 61.542 3 1.0539E-06 18802 20230619_1886_Aki_TMTPro18x_K_F6 102.73 87.188 36029 27268 30911 30824 33226 50143 33015 41347 46168 45524 38082 48952 39537 41794 33471 45934 44929 43653 33260 25004 31874 31093 34471 49001 33725 42912 45996 45895 39581 49245 40091 43522 34844 45936 42869 41491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154340000 20522 2079 19198 38923 31214 31214 1 9606 Homo sapiens -0.013011321069598125 NYADQISR Unmodified 965.45666 0.45665842 3273;856 A0A669KB35;Q9UPT6;A0A087WYG2;B7ZMF3;E9PFH7;G1UI24;Q9UPT6-2;Q68CV8;A0A8I5KWZ2;O60271;O60271-4;O60271-2;O60271-3;O60271-5;A0A060L980 MAPK8IP3;DKFZp762N1113;SPAG9 C-Jun-amino-terminal kinase-interacting protein 3;C-Jun-amino-terminal kinase-interacting protein 4 no no 0 0 0 4.5 0.5 1 1 36.916 36.984 2 0.003949 8300 20230619_1883_Aki_TMTPro18x_K_F4 117.89 74.082 93679 63915 81039 90011 84139 85802 83078 86853 111830 104700 120690 119010 123470 107830 101300 115800 145750 122760 86435 58768 83453 88680 87152 87113 84752 89149 112630 105310 123490 119790 124930 112010 105910 116600 138860 116600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169910000 20523 856;3273 19199 38924;38925 31215 31215 1 9606 Homo sapiens -0.02745164147381729 NYAQVFNK Unmodified 982.48723 0.48723027 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;Q75MG1;E7EMS9;E9PFE3;B7Z6N5;C9JF98;F8WDX8;Q9Y6E2-2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 0 2 0 1 50.049 50.103 3 0.00019393 14502 20230619_1881_Aki_TMTPro18x_K_F2 139.68 114.24 190340 165940 175770 170790 183100 204770 203570 209100 246570 185540 206190 177070 190160 153820 198060 204200 204440 174220 175970 151950 179850 172660 190270 204640 205390 212630 246910 188610 212580 179540 194930 162090 201640 202720 195340 165910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 167850000 20524 607 19200 38926 31216;31217 31217 2 9606 Homo sapiens -0.00471385762330101 NYCNIQVTK Unmodified 1138.5441 0.54409322 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 0 1.5 0.5 1 1 45.648 45.689 2 6.9498E-05 12622 20230619_1880_Aki_TMTPro18x_K_F1 160.59 119.4 26513 20713 25154 25843 21934 35450 29472 28929 33042 36080 37853 42365 40741 30981 25722 49359 47299 42832 24498 19010 25638 25799 23334 34937 29395 30192 33662 36264 38745 42344 40773 33304 27740 48864 45016 40767 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100180000 20525 2181 19201 38927;38928 31218 31218 1 9606 Homo sapiens -0.019637062681340467 NYDESGSPR Unmodified 1023.4258 0.42575222 3691 Q53HJ0;Q59EL2;P61201;P61201-2;B2R6N0;B4DIH5 COPS2 COP9 signalosome complex subunit 2 yes no 0 0 0 1 0 1 30.166 30.166 2 0.00015052 6060 20230619_1880_Aki_TMTPro18x_K_F1 147.4 120.96 22511 10807 25230 26167 41081 38854 28181 42727 32431 22398 43988 47396 31483 34736 38393 12324 44754 38556 20782 10038 25636 25306 41018 38389 29342 42792 33194 24475 44072 46512 32907 35047 39119 14308 42716 36365 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23459000 20526 3691 19202 38929 31219 31219 1 9606 Homo sapiens -0.08502362252261264 NYDTICQINSER Unmodified 1511.6675 0.66745583 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A0U1RQJ2 DST Dystonin yes no 0 0 0 4 0 1 44.691 44.735 2 7.6816E-05 11627 20230619_1883_Aki_TMTPro18x_K_F4 122.33 111.8 17474 16278 16520 21768 17596 18892 15710 16099 17186 21145 23581 19124 22903 23991 21231 21960 27606 24261 16165 14940 16904 21480 18141 19260 16009 16785 17696 21043 23832 19686 23351 24467 21972 22231 26328 23031 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17989000 20527 1693 19203 38930 31220 31220 1 9606 Homo sapiens -0.06791119678337054 NYDYSEPGR Unmodified 1099.4571 0.45705235 4739 Q9Y4E8-2;Q9Y4E8-3;Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes no 0 0 0 2.5 0.5 1 1 36.784 36.841 2 3.793E-06 8414 20230619_1881_Aki_TMTPro18x_K_F2 186.54 163.71 64591 44553 63542 63418 60604 69160 69463 65985 86166 93676 101150 90173 100250 86423 74224 102590 107440 94855 59659 40968 64594 62561 63462 69410 70055 68372 87456 93089 102910 91615 101140 90116 77919 102320 102390 90221 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69008000 20528 4739 19204 38931;38932 31221 31221 1 9606 Homo sapiens -0.08869789218169899 NYDYYASR Unmodified 1050.4407 0.44067401 3362 V9HWF9;O95861-4;O95861;O95861-3;B7Z9J7 HEL20;BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes no 0 0 0 4.5 0.5 1 1 39.591 39.657 2 0.002495 9352 20230619_1885_Aki_TMTPro18x_K_F5 125.82 92.267 138980 94236 131670 147750 186170 190770 170220 175540 204590 164840 203250 206230 191650 170640 194790 183850 216590 203030 128320 86761 135270 145280 188580 189250 173600 180070 206280 168490 208130 206300 196180 177860 199150 185670 206920 192680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 355940000 20529 3362 19205 38933;38934 31222 31222 1 9606 Homo sapiens -0.08252870384285416 NYEDEDSLK Unmodified 1111.4669 0.46694834 3433 P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 1 0 1 43.664 43.664 3 0.0039237 11738 20230619_1880_Aki_TMTPro18x_K_F1 67.207 47.445 48203 37631 46526 57631 58191 50928 53648 57760 77794 59573 63653 70421 72078 59768 59092 56638 87567 64672 44547 34616 47626 56441 59341 52179 55097 58593 77283 60469 66369 70589 72706 61850 61859 57438 83350 61425 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39148000 20530 3433 19206 38935 31223 31223 1 9606 Homo sapiens -0.08432646003461741 NYEEIAK Unmodified 865.41815 0.41814765 398 A0A024R6I3;Q53GF9;P49755;B4DZH3 TMED10 Transmembrane emp24 domain-containing protein 10 yes no 0 0 0 3.33 0.471 2 1 43.905 43.962 2;3 0.0067883 11270 20230619_1883_Aki_TMTPro18x_K_F4 138.26 58.082 122090 97483 150380 172760 188090 216500 209480 215520 253310 202040 269720 299680 248640 234160 224520 184610 320120 309140 113090 89838 151170 168710 192990 215410 211290 219870 255920 207930 275210 297350 253520 241110 233760 193430 305290 292340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 331600000 20531 398 19207 38936;38937;38938 31224;31225 31225 2 9606 Homo sapiens -0.019944697818914392 NYEGSPIK Unmodified 906.4447 0.44469675 2882 E5RI98;A0A7I2V5J8 NPM1 yes no 0 0 0 5.5 0.5 1 1 42.089 42.178 2 0.0016512 10423 20230619_1885_Aki_TMTPro18x_K_F5 125.16 66.179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20532 2882 19208 38939;38940 31226;31227 31226 2 9606 Homo sapiens -0.012267808905789934 NYEHLFK Unmodified 949.46577 0.46576654 974 P57737-3;A0A0A6YYL4;Q9Y3D7;I3L1U7;I3L0X9;I3L3T0 CORO7;CORO7-PAM16;PAM16 Coronin-7;Coronin;Mitochondrial import inner membrane translocase subunit TIM16 yes no 0 0 0 7.5 0.5 1 1 46.286 46.349 3 0.011353 12031 20230619_1888_Aki_TMTPro18x_K_F8 90.657 46.953 301580 248700 276820 308300 299370 344940 343300 326360 428480 360230 385330 381030 427610 351490 371320 424730 444970 417680 278680 228180 283840 306910 310640 345560 346120 335650 429780 363080 399160 385000 432410 367460 382910 425100 424840 396890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 391710000 20533 974 19209 38941;38942 31228;31229 31229 2 9606 Homo sapiens -0.010987707910544486 NYELMESEK Oxidation (M) 1157.4911 0.4910546 1421 E5RHW4;A0A384ME54;O94905;E5RJ09 ERLIN2 Erlin-2 yes no 0 1 0 2 0 1 42.764 42.845 2 0.075866 11133 20230619_1881_Aki_TMTPro18x_K_F2 80.755 57.401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20534 1421 19210 38943 31230 31230 889 1 9606 Homo sapiens -0.08139128841457932 NYELMESEK Unmodified 1141.4961 0.49613997 1421 E5RHW4;A0A384ME54;O94905;E5RJ09 ERLIN2 Erlin-2 yes no 0 0 0 2.5 0.5 1 1 48.116 48.191 2 0.00030111 13585 20230619_1881_Aki_TMTPro18x_K_F2 123.79 82.344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20535 1421 19210 38944;38945 31231;31232 31231 2 9606 Homo sapiens -0.06894824978826364 NYEQWQLQR Unmodified 1263.5996 0.59963426 1312 A0A590UK95;A0A1W2PNZ8;Q59ER4;A0A590UK44;B4DN85;A0A590UJW8;A0A8V8TKK4;A0A590UJQ1;Q96J02-3;Q96J02-2;Q96J02 ITCH E3 ubiquitin-protein ligase Itchy homolog yes no 0 0 0 7 0 1 46.926 47.015 2 0.00016972 12195 20230619_1887_Aki_TMTPro18x_K_F7 122.13 90.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20536 1312 19211 38946 31233 31233 1 9606 Homo sapiens -0.021621567561624033 NYFSFGK Unmodified 861.4021 0.40210366 1869 B4DN92;A0A994J7M5;A0A994J4W5;A8K285;A8K0M6;H3BTS6;Q8NBN3;Q8NBN3-2 TMEM87A Transmembrane protein 87A yes no 0 0 0 3 0 1 55.366 55.407 2 0.078941 16515 20230619_1882_Aki_TMTPro18x_K_F3 73.665 42.292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20537 1869 19212 38947 31234 31234 1 9606 Homo sapiens -0.034141312281235514 NYGFVHIEDK Unmodified 1220.5826 0.58258722 2142;4410 A8K9U0;Q9BWF3;E9PB51;Q9BWF3-4;D6R9K7;J3QRR5;Q9BWF3-3;Q9BWF3-2;Q9BQ04;E9PLB0;E9PM61;U3KQD5 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B no no 0 0 0 5.5 0.5 1 1 48.309 48.386 3 0.013346 13177 20230619_1886_Aki_TMTPro18x_K_F6 58.676 50.163 78505 71790 88368 100770 88656 136440 92611 93264 124210 126810 143230 145590 141500 139710 139680 136160 138320 135900 72720 65931 89073 99765 92507 134150 94159 99161 125510 127010 146000 146720 144490 144010 141980 136920 132340 129090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 493370000 20538 2142;4410 19213 38948;38949 31235 31235 1 9606 Homo sapiens -0.018880773619457614 NYGILADATEQVGQHK Unmodified 1742.8588 0.85876208 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;B4DDR3;Q9BZZ5-3;E9PQK6 API5 Apoptosis inhibitor 5 yes no 0 0 0 6.5 0.5 2 2 52.201 52.277 3;4 1.4539E-64 14877 20230619_1886_Aki_TMTPro18x_K_F6 277.34 253.45 514200 441810 504200 510030 461600 546720 566770 520610 642920 641130 679610 622780 696190 611610 610980 698240 661620 680400 475540 405010 512490 510110 486010 549500 567730 537010 652110 641080 695840 632940 706070 635780 626070 699080 632670 646370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1625499999.9999998 20539 4478 19214 38950;38951;38952;38953 31236;31237 31236 2 9606 Homo sapiens 0.017047046244442754 NYGSYSTQASAAAATAELLK Unmodified 2015.98 0.97999942 3224 Q6FHJ5;O14828-2;O14828 SCAMP3 Secretory carrier-associated membrane protein 3 yes no 0 0 0 4.5 3.5 1 1 61.088 61.104 3 3.2332E-16 18243 20230619_1888_Aki_TMTPro18x_K_F8 157.57 141.8 67272 53507 55223 71609 61128 70776 69170 64208 83308 81316 80453 85619 95244 75612 77183 97014 90328 100040 62102 49139 57294 70779 63317 71469 69693 66541 83981 81413 83348 86384 95854 79489 79640 97252 86366 94951 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 283590000 20540 3224 19215 38954;38955 31238;31239 31239 2 9606 Homo sapiens 0.012648624765006389 NYILDQTNVYGSAQR Unmodified 1740.8431 0.84311201 95 Q9BUJ2;A0A0A0MRA5;Q9BUJ2-2;Q9BUJ2-4;A8K6U7;A8K3W4;B7Z4B8;A0A024R0J9;Q9BUJ2-3;A8K5K0;M0R3F1 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 8 0 1 51.347 51.424 2 1.6834E-13 14165 20230619_1888_Aki_TMTPro18x_K_F8 178.32 139.97 15846 12820 14049 15907 14299 15613 17462 15817 15408 19061 22676 22046 20947 18955 25131 21178 21491 20872 14638 11763 14438 15806 14911 15817 17363 16240 16109 19171 22857 22143 21631 19763 25259 21246 20593 19830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30019000 20541 95 19216 38956 31240 31240 1 9606 Homo sapiens 0.0023241810743002134 NYIMDFQVGK Unmodified 1213.5801 0.58014438 3420 P09455;A0A0A0MQT0;A0A0A0MTB9;H0YAK8;P09455-2;P09455-3 RBP1 Retinol-binding protein 1 yes no 0 0 0 3.25 2.77 1 2 1 60.159 60.174 2;3 2.2816E-06 17858 20230619_1888_Aki_TMTPro18x_K_F8 166.66 124.78 188580 157060 183310 184970 124800 154170 194630 199950 216110 197430 199770 219780 217250 211120 208340 232950 228650 257560 174350 144020 185820 184220 136270 159280 192930 201070 218210 200340 206670 221800 220960 219120 213280 235060 218770 244260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 566660000 20542 3420 19217 38957;38958;38959;38960 31241;31242;31243 31243 3 9606 Homo sapiens -0.018102490912724534 NYIMDFQVGK Oxidation (M) 1229.5751 0.575059 3420 P09455;A0A0A0MQT0;A0A0A0MTB9;H0YAK8;P09455-2;P09455-3 RBP1 Retinol-binding protein 1 yes no 0 1 0 8 0 1 55.408 55.47 3 0.0019797 15970 20230619_1888_Aki_TMTPro18x_K_F8 80.763 56.472 369380 318450 334180 366910 317710 321730 427050 450970 368860 363740 429810 388840 399610 387910 418110 430070 405450 429560 341400 291920 342380 366210 333840 331840 422590 449400 381310 372850 436670 393970 409940 402170 424230 431500 388220 407920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 755360000 20543 3420 19217 38961 31244 31244 2040 1 9606 Homo sapiens -0.030545529539040217 NYIQGINLVQAK Unmodified 1359.751 0.75104953 2530 B4DLN1;P52815;Q96Q74 MRPL12;MRPL7/L12 39S ribosomal protein L12, mitochondrial yes no 0 0 0 3.5 0.5 1 1 57.612 57.631 3 1.4459E-07 17441 20230619_1882_Aki_TMTPro18x_K_F3 164.65 134.08 318380 251080 309430 367050 303390 517890 392060 386650 567520 358520 323430 292570 336780 285850 407270 365180 356530 208790 294260 230820 315620 362780 319780 508540 395290 403230 557830 362470 343850 299970 346730 299070 409810 357200 340590 200510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 696630000 20544 2530 19218 38962;38963 31245;31246 31245 2 9606 Homo sapiens 0.08556404551700325 NYISAWELQR Unmodified 1278.6357 0.63568542 922 U3KQC1;A0A0A0MQU0;Q9BV38;K7EIR0;A0A087X237;K7EKX5;K7EML4 WDR18 WD repeat-containing protein 18 yes no 0 0 0 8 0 1 55.654 55.716 2 3.2544E-05 16023 20230619_1888_Aki_TMTPro18x_K_F8 153.97 110.16 55815 56947 54738 57215 53614 65223 62385 70755 72493 56271 56901 48544 60377 51161 68797 65399 57462 53444 51682 52111 55703 57909 56072 65479 62722 71475 72612 57434 59241 49795 61905 53432 69164 64841 55061 50903 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41003000 20545 922 19219 38964 31247 31247 1 9606 Homo sapiens 0.007513004206884943 NYITMDELRR Unmodified 1309.6449 0.6448699 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A7I2V4Y4;H9KV75;B7Z565;B4DFY0;B3KUX9;A1L0V1;H0YJW3 ACTN1 Alpha-actinin-1 yes no 0 0 1 7 0 1 45.389 45.475 3 1.5291E-07 11514 20230619_1887_Aki_TMTPro18x_K_F7 186.87 156.31 81066 94608 92059 70312 75707 67026 80528 89558 85115 96663 85471 76088 96552 69103 83680 110820 89621 80207 75243 86356 92192 73164 79893 68706 81147 90070 86568 96623 88098 78020 97494 73749 85796 108900 85626 76540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129150000 20546 387 19220 38965 31248 31248 1 9606 Homo sapiens 0.0024332571472314157 NYLEGIYNVPVAAVR Unmodified 1676.8886 0.88860564 713 B2R9J4;A0A024RCB2;Q16540;H7C2P7;A6NJD9;A8MVT4;A8MYK1 MRPL23 39S ribosomal protein L23, mitochondrial yes no 0 0 0 2 0 1 61.542 61.552 3 3.1248E-14 19285 20230619_1881_Aki_TMTPro18x_K_F2 183.81 143.22 51702 43949 45053 43215 57502 69654 61044 52191 66427 56996 44271 59414 63203 51424 66694 56175 68986 55178 47768 40234 46511 44068 58902 68032 61461 54655 66519 57457 47433 59862 64073 53568 67814 56363 65888 52469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98331000 20547 713 19221 38966 31249 31249 1 9606 Homo sapiens 0.07723688360442793 NYLLPAGYSLEEQR Unmodified 1651.8206 0.82058566 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B3KVT9 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 6.33 0.471 2 1 57.516 57.58 2;3 1.4053E-08 16811 20230619_1887_Aki_TMTPro18x_K_F7 125.28 102.75 59241 49867 54443 64928 57374 64730 63638 65535 77450 72384 67793 67067 74877 61073 63045 73518 79398 77916 54752 45773 55815 64315 59571 65482 64228 67078 77750 72636 70306 68123 75636 63885 65274 73893 75799 73964 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88127000 20548 1984 19222 38967;38968;38969 31250;31251 31251 2 9606 Homo sapiens 0.020748187098206472 NYLPAINGIVFLVDCADHSR Unmodified 2273.1263 0.12628651 4052 Q5SQT9;Q9NR31;Q8NG23;B2R679;Q9NR31-2;Q5SQT8 SAR1A GTP-binding protein SAR1a yes no 0 0 0 2 0 1 65.056 65.063 3 0.083648 20846 20230619_1881_Aki_TMTPro18x_K_F2 35.091 25.56 13799 11961 13750 13678 9579.3 13955 12744 15145 17034 15628 17568 20149 22267 20365 13788 22312 21698 24323 12764 10964 13911 13683 10399 14111 12812 15399 17127 15910 18211 20260 22190 21096 14654 22477 20702 23071 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16966000 20549 4052 19223 38970 31252 31252 1 9606 Homo sapiens 0.040648414406859956 NYLPLLEPVKPEPK Unmodified 1635.9236 0.92359416 2447 B3KY61;U3KPZ7;Q9P2N5;Q05DK9 RBM27 RNA-binding protein 27 yes no 0 0 1 2 0 1 59.293 59.305 3 6.5759E-05 18347 20230619_1881_Aki_TMTPro18x_K_F2 100.45 75.662 58335 46752 59254 53450 55236 57248 62304 57856 68843 58556 64889 55296 61880 50301 67486 70794 62803 59309 53941 42865 60016 53514 57849 57639 62620 59094 69565 59063 66586 56187 63498 53131 68286 70163 60111 56466 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11553000 20550 2447 19224 38971 31253 31253 1 9606 Homo sapiens 0.13106931168408664 NYLSLAPLFFK Unmodified 1311.7227 0.72270951 1855 A0A8V8TQW4;O14617-4;O14617;O14617-5;Q6PK82;A0A2R8Y4J3;A0A087WYN6 AP3D1 AP-3 complex subunit delta-1 yes no 0 0 0 6.5 0.5 1 1 65.345 65.381 3 0.00035743 20501 20230619_1886_Aki_TMTPro18x_K_F6 97.734 73.352 23832 16810 22012 22274 15754 20319 21340 21279 26362 16585 17945 16421 18388 16368 16372 21146 18001 15981 22004 15444 22421 22023 17044 20706 21352 21555 26198 17027 18815 16698 18667 17127 16800 20873 17194 15241 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52663000 20551 1855 19225 38972;38973 31254 31254 1 9606 Homo sapiens 0.07931706642375502 NYLSPTFK Unmodified 968.49673 0.49673232 2154 A8KAK1;Q9NYU2-2;Q9NYU2;H7BZG0;Q9NYU1 UGGT1;UGGT2 UDP-glucose:glycoprotein glucosyltransferase 1;UDP-glucose:glycoprotein glucosyltransferase 2 yes no 0 0 0 2.5 0.5 1 1 52.224 52.276 2 0.0020075 15170 20230619_1882_Aki_TMTPro18x_K_F3 133.57 66.892 123880 114060 119890 130270 128280 153520 134740 127980 161210 141600 156490 175520 164850 138740 149900 160080 177740 184150 114610 104520 122330 130540 132890 152890 136300 132920 162500 143460 161270 175330 167290 145480 154280 161850 169840 174630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94278000 20552 2154 19226 38974;38975 31255 31255 1 9606 Homo sapiens 0.011223825231923001 NYLSQPR Unmodified 876.44537 0.44536545 1233 A0A140VK65;P21281;Q59HF3;H0YC04;H0YAT8;E5RGH6 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 5.5 2.69 1 1 1 1 36.988 37.018 2 0.01296 8269 20230619_1888_Aki_TMTPro18x_K_F8 114.6 78.722 516710 409890 419930 470680 491710 523070 483510 506180 708690 494760 567210 525540 531930 459780 481790 574180 641590 536720 476950 375840 435960 471100 505380 524700 494860 517930 702800 502050 586650 530250 541940 482380 500090 572830 611590 510560 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 530750000 20553 1233 19227 38976;38977;38978;38979 31256;31257;31258 31258 3 9606 Homo sapiens 0.0022005854914368683 NYMSNPSYNYEIVNR Oxidation (M) 1878.8207 0.82066201 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 0 6.5 0.5 2 2 46.558 46.644 2;3 4.7731E-14 12020 20230619_1887_Aki_TMTPro18x_K_F7 173.44 152.19 69614 62029 70752 77067 76660 84369 85193 84803 85069 100880 103850 96743 96591 91423 96784 102980 110640 109610 64414 56896 71912 76691 79360 84774 85422 87024 87485 100930 105310 98237 98888 95071 99212 103660 105720 104040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 240800000 20554 3881 19228 38980;38981;38982;38983 31259;31260;31261 31260 2555 3 9606 Homo sapiens -0.08359549352485374 NYMSNPSYNYEIVNR Unmodified 1862.8257 0.82574739 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 7.5 0.5 1 1 50.872 50.95 3 6.8511E-11 13921 20230619_1888_Aki_TMTPro18x_K_F8 161.49 155.71 86994 75881 80486 91671 75233 96433 98622 95630 120480 110920 113800 102010 117420 105110 107310 122660 114540 119060 80424 69588 82318 91343 79334 97106 98740 98165 121190 111050 117150 104130 119280 109230 109790 122740 109550 113110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251450000 20555 3881 19228 38984;38985 31262 31262 1 9606 Homo sapiens -0.07115245489853805 NYNKPWEPK Unmodified 1174.5771 0.57710791 4 K7WVL1;A0A346LZT4;Q94P44;V9JTG4;V5JPT0;U5YV54;U3M4F0;U3LAD1;T2HIR1;T2HIA7;T1SWT3;R9ZR79;R9Y5H6;Q6RM58;A4ZL69;Q8W8E1;Q8HNQ6;Q85KZ3;Q85KW5;Q7YEG9;Q7YEE7;Q7YCG7;Q7YCD6;Q7GXU0;Q6RNJ6;Q9B1A3;H9SZ30;Q6RLG0;Q4F196;Q4F0Q1;Q3S937;Q5S8W6;Q5S8S7;Q4VG42;Q4GUF2;Q4GR32;Q4GFJ0;Q4GAR3;Q4F675;Q3S924;H9T2R7;Q5S8Z2;Q5XTF0;Q0ZK82;Q0Z7D7;M1LM67;K9R3Q7;J7K7C6;I6QAW7;I3Q9B1;H9T6C8;H9T1M7;A4ZKZ1;H9SRR9;D6C0Z2;G4W1I6;H9PSV8;H9PBK1;H9LKY3;H6WHT5;H6WHI1;H6TVP0;G9LL05;G9LIB9;E1B2Y7;G9LF90;F8RZJ4;A0A059QM53;F2WHR5;F2WGM5;E7E463;E5QB59;E5E1V2;E5E129;E5DY52;E2DFE6;A0A023QZ89;A0A343GTX5;H9RZ55;G5D7T4;D9MZN6;B2XII6;H9S1L2;D1GI26;D1G3X0;C8YFB2;C8YAC0;C8YA16;C5MNC7;B8X5B2;B7ZJ43;B2XMG1;B2MZ68;D6R613;D7SFF4;B2MXR9;B2CB77;A8JMT6;A8JL09;A6Z519;A6Z3V4;A6Z2R5;A6YXS5;A6YTJ7;B2XIJ9;A3R095;A0A5J6E9P9;A0A1B1PEM9;A0A7T5BMN9;V9M9E1;A0A5J6E7T3;A0A493QZE5;A0A6G9L718;A1DV59;A1DT13;A0SBU5;A0S9D7;A0S208;A0A8F5VGB6;A0A7D5U3J5;A0A5P9RLW4;A0A7D5PH99;A0A6M8U9V1;A0A6B9RDI4;A0A343YSQ0;A0A6B9RCE0;A0A6B7GJF9;A0A649YF30;A0A649YE97;A0A5P9RQ78;A0A5P9RMR9;A0A345AJZ8;A0A3Q8QWA8;A0A3Q8QX02;A0A059QTT8;A0A3Q8UG22;A0A344AK35;A0A344AJ71;A0A343GM20;A0A346M051;A0A493QZL8;A0A344AK07;A0A348H8B4;A0A075X6N5;A0A346M0E1;A0A410RF91;A0A3Q8UFX6;A0A3S8V829;A0A143FYJ4;A0A346LZQ8;A0A346M0F5;A0A1B1PEP8;A0A346LZY4;A0A346M015;A0A3S9JHN9;A0A410REZ2;A0A410REW9;A0A5P8DLM8;A1DVF0;A0A5J6M8H9;A0A343H8W5;A0A343FKF6;A0A343SDD7;A0A1B0W0U4;A0A343RZ02;V9M714;A0A343KX87;A0A343KW99;A0A343KMH9;A0A343KLK4;A0A343KKD8;A0A343IA48;A0A343YTD5;A0A161GI05;A0A343FD06;A0A343F814;A0A343ES23;A0A342YIX6;A0A342LFZ2;A0A1W6EQC1;A0A1S6M160;A0A1L1ZBK8;A0A1J0QQD7;A0A1B2VWW7;A0A143FYL8;A0A059QAQ1;A0A059QNN4;A0A096WXL7;A0A343LF00;A0A343YSM4;A0A143FZ63;A0A141ZRI2;A0A0U3FIW0;A0A0R4PWR5;A0A0N6YMY6;A0A0G2UR89;A0A0E3D7E7;A0A097Q3K7;A0A076MDE1;R9Y6A5;A0A068CC51;A0A059S4M9;A0A059RV36;A0A059RUI7;A0A059RSG1;A0A059RQV9;A0A059RNH1;A0A059RKD4;A0A059RIB6;A0A059RI25;P03928 ATP8;atp8;ATPase 8;MT-ATP8 ATP synthase protein 8 yes no 0 0 1 2 0 1 45.288 45.37 3 0.010638 12285 20230619_1881_Aki_TMTPro18x_K_F2 70.908 41.932 332310 285480 326970 331980 389870 364830 412440 400190 367670 390180 452250 290160 328720 231420 456710 220320 254590 165390 307340 261720 333530 332030 399860 367460 413220 406030 380410 391620 453800 297380 344800 240290 449680 219380 244920 158000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125840000 20556 4 19229 38986 31263 31263 1 9606 Homo sapiens -0.0031975615379451483 NYNTSIDVR Unmodified 1080.52 0.51998696 2334 C9JWE6;E7ENB6;B7Z2I8;B7ZAG0;B7Z5X9;B7ZAC9;B7Z5Q3;B2RWP2;Q9UPQ7 PDZRN3 E3 ubiquitin-protein ligase PDZRN3 yes no 0 0 0 5 0 1 40.03 40.119 2 0.0028464 9598 20230619_1885_Aki_TMTPro18x_K_F5 102.62 47.18 30445 26551 32197 37162 49541 51753 51701 52150 68289 41926 50124 52994 44854 39070 42664 54196 52498 49975 28177 24387 32862 36834 50137 51222 52472 52960 67803 43298 52066 52848 45870 41537 44030 53949 50117 47521 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53926000 20557 2334 19230 38987 31264 31264 1 9606 Homo sapiens -0.017052234301445424 NYPATFWVNPQFK Unmodified 1610.7882 0.78816332 326 A0A024R5A3;A0A024R580;B2RDI5;P07384;B4DWH5 CAPN1 Calpain-1 catalytic subunit yes no 0 0 0 5 0 1 62.321 62.368 3 4.4256E-05 18971 20230619_1885_Aki_TMTPro18x_K_F5 113.24 74.452 210380 180770 229290 220490 215470 233040 223730 240260 257490 230010 258450 261010 248520 229200 257180 287050 269560 303930 194740 165800 231060 219660 225070 234880 226290 244650 260350 233960 264760 262610 254500 240460 262230 288370 258030 288370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 222430000 20558 326 19231 38988 31265;31266 31265 2 9606 Homo sapiens 0.007200760974683362 NYPATVHGALLSGLR Unmodified 1567.8471 0.84707518 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5QJR3;A0A8I5KRF4;R4GMP9 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 0 5 0 1 48.937 49.014 3 1.9102E-10 13298 20230619_1885_Aki_TMTPro18x_K_F5 146.3 126.46 38694 40555 36929 42601 42346 52986 41914 39837 47554 28208 34467 26205 30462 26918 37997 30414 31121 31373 35829 37122 37784 42989 43604 52489 42451 41309 47533 29124 35767 26769 31580 27929 38085 30587 29845 29787 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94451000 20559 1785 19232 38989 31267 31267 1 9606 Homo sapiens 0.08586552391807345 NYPDPVSIIQK Unmodified 1272.6714 0.67140222 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;A0A804HK69;A0A804HKU1 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 4.5 3.5 1 1 57.695 57.72 3 0.00019189 16805 20230619_1888_Aki_TMTPro18x_K_F8 111.94 81.047 164050 156160 151080 149860 157920 192300 177090 173500 253470 132350 119990 131890 139560 122090 144500 155820 140270 147640 151750 142870 154680 152540 164320 190840 179680 177440 248220 136230 130360 133620 142150 128020 146680 155560 134300 140290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 478450000 20560 1736 19233 38990;38991 31268;31269 31269 2 9606 Homo sapiens 0.04597337877703467 NYPYSPR Unmodified 895.41882 0.41881635 4623 Q9NXR7-4;Q9NXR7-3;Q9NXR7;Q9NXR7-1;Q6ZWH1;A2NFR5 BRE;Hin-3 BRCA1-A complex subunit BRE yes no 0 0 0 7.5 0.5 1 1 36.976 37.001 2 0.022901 8260 20230619_1888_Aki_TMTPro18x_K_F8 101.28 61.181 62248 45234 48192 55760 76686 69653 70409 69635 81953 55334 75096 73469 58228 60177 73457 70395 78688 69799 57412 41521 50586 55626 77159 69412 71679 70757 82443 57281 76650 73360 60774 62983 74698 70562 75176 66334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47975000 20561 4623 19234 38992;38993 31270 31270 1 9606 Homo sapiens -0.03307630342192169 NYQEALR Unmodified 892.44028 0.44028008 848 B7Z879;Q658K0;Q53FX3;A0A087WXL6;Q9H270;B3KPS8 VPS11;DKFZp564P2364 Vacuolar protein sorting-associated protein 11 homolog yes no 0 0 0 5 0 1 37.699 37.792 2 0.086015 8603 20230619_1885_Aki_TMTPro18x_K_F5 71.922 30.62 39779 27945 35740 45126 42029 46280 46995 44064 63874 49278 59111 57666 62405 49129 53087 56878 72139 60345 36719 25734 36798 44137 43328 46638 47594 45330 63865 49814 60992 57887 63139 51387 55211 57219 68756 57323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29841000 20562 848 19235 38994 31271 31271 1 9606 Homo sapiens -0.010242453134651441 NYQQNYQNSESGEK Unmodified 1687.7074 0.70740639 3745 P67809;H0Y449;A0JLU4;Q6PKI6;Q2VIK8;Q7KZ24;C9J5V9 YBX1 Nuclease-sensitive element-binding protein 1 yes no 0 0 0 3.33 0.471 2 1 37.981 38.031 2;3 2.6518E-17 8778 20230619_1882_Aki_TMTPro18x_K_F3 218.01 194.79 94305 48633 114460 128860 131140 132410 112990 141140 121780 159560 206430 189530 213330 188810 145080 103900 224230 183090 87154 45232 114900 123420 134260 133700 115430 144010 127060 161090 207890 190890 214310 190380 152830 110400 213500 173220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1598899999.9999998 20563 3745 19236 38995;38996;38997 31272;31273;31274 31272 3 9606 Homo sapiens -0.1089390147405993 NYQVLPDR Unmodified 1003.5087 0.50869399 4668 Q9UJA5;Q9UJA5-4 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes no 0 0 0 5.5 0.5 1 1 42.581 42.664 2 0.0068953 10622 20230619_1885_Aki_TMTPro18x_K_F5 109.21 65.968 66953 54351 59236 69259 65871 71137 73014 70922 86579 77430 79967 71038 82891 74386 68689 86129 85943 79447 61848 49884 60978 68733 68108 71790 73610 72652 87152 77745 82409 72573 83877 77223 71144 85945 82018 75554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59145000 20564 4668 19237 38998;38999 31275;31276 31275 2 9606 Homo sapiens 0.007079992663761914 NYTDEAIETDDLTIK Unmodified 1739.8101 0.81014013 1051 Q05DH1;A0A0K0K1K4;O14818;H0Y586;O14818-2 PSMA7 Proteasome subunit alpha type;Proteasome subunit alpha type-7 yes no 0 0 0 2.33 0.471 2 1 57.11 57.132 2;3 7.054299999999999E-19 17249 20230619_1882_Aki_TMTPro18x_K_F3 204.67 192.18 81525 65157 70938 85275 72791 88883 84744 83788 206050 95066 92281 88144 112100 88827 83543 112710 97819 99741 75292 59821 73070 84484 76137 89459 88354 86261 198140 95566 100780 89874 112450 92889 86404 112070 93468 94865 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 564180000 20565 1051 19238 39000;39001;39002 31277;31278 31278 2 9606 Homo sapiens -0.03017253525945307 NYTDNELEK Unmodified 1124.4986 0.49858282 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;P00367-3;A0A804HJD7;B3KT18;A0A804HKE0;P00367-2;Q59FQ4 GLUD1 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase yes no 0 0 0 3 0 1 43.666 43.736 2 8.7239E-12 11256 20230619_1882_Aki_TMTPro18x_K_F3 222.88 156.45 102830 82004 85859 98931 123040 126830 124560 128220 157010 125440 167310 175530 147650 146430 136190 146820 186140 164990 94938 75227 89274 98886 124910 126180 126470 130790 158340 128500 170340 174920 150960 151910 141490 148550 177470 156590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73757000 20566 2542 19239 39003 31279 31279 1 9606 Homo sapiens -0.05868653249513045 NYVENRPK Unmodified 1018.5196 0.51959303 1288 P45984-2;A0A286YFD7;A0A286YEN5;P53779;P45984-3;A0A286YES9;A0A286YFJ6;B7Z1Z1;A0A286YF19;A0A286YF35;P45984-4;D6RJF9;A0A286YEQ0;A0A286YFI3;A0A286YEQ7;A0A286YEX7;A0A286YFC0;A0A1P0B7D2;P53779-3;P53779-2;A0A286YFJ4;A0A286YF02;A0A286YFE2;A0A286YEW9;D7R526;F8W9R5;A0A286YF62;A0A286YF83;A0A286YFM6;A0A286YFA6;P45984;A0A286YF97;A0A286YEY0;A0A286YF85;A0A286YEV3;A0A286YES0;A0A286YFN2;A0A286YFB6;B5BUJ7;D7R527;Q499Y8;I6L9F3;A0A286YEV8;B3KR72 MAPK9;MAPK10 Mitogen-activated protein kinase 9;Mitogen-activated protein kinase 10;Mitogen-activated protein kinase yes no 0 0 1 7.5 0.5 1 1 33.491 33.529 3 0.013147 6919 20230619_1888_Aki_TMTPro18x_K_F8 76.221 44.461 80236 50291 88267 95310 104160 123120 91160 106390 112520 90834 121570 120990 110160 100200 103770 57986 142730 119150 74145 46442 89280 92821 106660 121890 93398 109390 113680 93588 123790 120660 112550 101870 107500 62540 136020 112610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32538000 20567 1288 19240 39004;39005 31280;31281 31281 2 9606 Homo sapiens 0.011074016406723786 NYVHFAATQVQNR Unmodified 1546.7641 0.76407383 89 H0Y612;A0A024R0F6;Q9UPN9-2;Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 0 0 0 3 0 1 42.198 42.261 3 0.014945 10573 20230619_1882_Aki_TMTPro18x_K_F3 59.77 41.358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20568 89 19241 39006 31282 31282 1 9606 Homo sapiens 0.012562356637999983 NYVLNYLATRPK Unmodified 1450.7932 0.79324869 2083 A8K607;Q9UIA9;E7ESC6;H0YBE1 XPO7 Exportin-7 yes no 0 0 1 7 0 1 54.341 54.404 3 0.02243 15550 20230619_1887_Aki_TMTPro18x_K_F7 62.287 50.694 96487 87547 114650 100050 101030 126410 116900 110390 143050 102270 99111 105300 104710 107560 125530 121970 125750 149410 89418 80233 114680 100410 106550 125430 117750 113680 142390 104000 104110 106860 107840 111610 127280 123870 120480 141530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 270270000 20569 2083 19242 39007 31283 31283 1 9606 Homo sapiens 0.0858837996006514 NYVPPKGDK Unmodified 1016.5291 0.52909508 4068;3509 Q5U071;D6R9A6;P26583 HMGB2 High mobility group protein B2 no no 0 0 1 8 0 1 39.584 39.573 3 0.0044918 9320 20230619_1888_Aki_TMTPro18x_K_F8 82.029 50.801 136140 66107 175960 181670 194940 212680 178010 202660 152310 144220 252910 212460 133150 137320 280360 48937 147610 97912 125870 61555 175750 174150 200300 212230 179910 206140 160340 150840 249490 209960 146610 139340 273870 54174 142170 92660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209580000 20570 4068;3509 19243 39008 31284 31284 1 9606 Homo sapiens 0.021491699262014663 NYVTPVNR Unmodified 961.49813 0.49812931 1416 A0A384ME16;Q6ICN0;B0LPF3;P62993;B3KR50;P62993-2 GRB2 Growth factor receptor-bound protein 2 yes no 0 0 0 5.33 3.09 1 1 1 36.774 36.792 2 0.0053725 8155 20230619_1888_Aki_TMTPro18x_K_F8 113.7 85.48 157820 120100 139340 155300 159450 166080 166790 170140 205260 193270 225340 202590 216640 195000 184600 199370 258390 214770 145730 110270 143470 154070 164250 167230 168960 174140 207660 194420 229670 205050 219990 201610 192400 201130 246210 203990 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 361490000 20571 1416 19244 39009;39010;39011 31285;31286;31287 31287 3 9606 Homo sapiens 0.01584016611957395 NYYEQWGK Unmodified 1086.4771 0.47705951 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A087WUI2;I6L957;A0A7I2V4N0;A0A7I2YQN4 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 7.2 0.748 1 2 2 50.235 50.314 2 7.1914E-05 13641 20230619_1887_Aki_TMTPro18x_K_F7 184.38 131.97 1193100 1111800 1156700 1048900 1170300 1373400 1310000 1388500 1291900 1520300 1418500 1700800 1143300 1499500 633540 1851800 817030 1408000 1103900 1017200 1177800 1069900 1218700 1365000 1312800 1420200 1323300 1534200 1438400 1711100 1154900 1568600 670570 1826900 784040 1339900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3460099999.9999995 20572 3491 19245 39012;39013;39014;39015;39016 31288;31289;31290;31291 31289 4 9606 Homo sapiens -0.06271993487553118 NYYGYQGYR Unmodified 1182.5094 0.50942227 3957 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 3.67 3.09 1 1 1 42.317 42.344 2 9.6865E-06 11110 20230619_1880_Aki_TMTPro18x_K_F1 174.27 127.19 292540 247960 277400 338290 336160 368760 393120 397450 376310 377900 382150 362800 343360 339020 400550 389980 408610 364450 270450 227710 284380 334510 345910 371150 392500 403470 384580 382420 390180 368310 354720 352950 406680 389740 390570 346590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 368920000 20573 3957 19246 39017;39018;39019 31292;31293;31294 31292 3 9606 Homo sapiens -0.07453206084574049 NYYQDTPK Unmodified 1027.4611 0.4610751 4722 Q9Y3C1 NOP16 Nucleolar protein 16 yes yes 0 0 0 5 0 1 41.057 41.145 2 8.5032E-05 9991 20230619_1885_Aki_TMTPro18x_K_F5 182.53 146.65 88577 74300 83674 85775 101040 102850 93628 97659 126430 126580 133960 124070 150570 123130 110310 146750 166320 135560 81880 68118 85665 85927 103380 102630 95865 100860 127290 126330 137690 126100 151260 128310 116160 146370 158380 128990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105930000 20574 4722 19247 39020 31295 31295 1 9606 Homo sapiens -0.05155699724468832 NYYTPDR Unmodified 927.40865 0.4086456 1879 A0A994J5K1;Q5SXN9;Q10713;Q10713-2 PMPCA Mitochondrial-processing peptidase subunit alpha yes no 0 0 0 4 0 1 35.985 36.031 2 0.043195 7943 20230619_1883_Aki_TMTPro18x_K_F4 94.662 11.299 88759 71033 75382 84149 95176 101070 99497 97445 127500 114200 113270 117700 125340 107200 97963 111780 151530 113850 81960 65150 78042 84130 97453 100850 100900 100230 127740 114660 117410 118920 126310 111170 103110 112350 144200 108250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151860000 20575 1879 19248 39021 31296 31296 1 9606 Homo sapiens -0.057962380674212 PAAAAAAATPAVR Unmodified 1136.6302 0.63020611 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;H0YAS6;H0YB75;H0YAS7;H0YAW6 PABPC1 Polyadenylate-binding protein 1;Polyadenylate-binding protein yes no 0 0 0 1 0 1 40.724 40.724 2 0.00040937 10429 20230619_1880_Aki_TMTPro18x_K_F1 98.04 73.146 32899 22703 27364 31924 30379 37482 33596 35939 48037 38166 43587 43555 44897 43875 36880 42266 45148 39117 30349 20873 28336 31541 31475 37424 34130 36873 47903 38648 44973 43986 45446 45126 38126 42320 43076 37209 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14774000 20576 566 19249 39022 31297 31297 1 9606 Homo sapiens 0.06735621628877198 PAAPPAPGPGQLTLR Unmodified 1441.8041 0.80414773 178 A0A024R1Z6;Q99536;K7ERT7 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes no 0 0 0 2 0 1 49.081 49.146 3 9.9119E-09 14011 20230619_1881_Aki_TMTPro18x_K_F2 113.59 99.679 121920 88451 108430 115630 109580 130460 104730 114850 118380 126300 118230 129600 132200 122800 113440 143290 129740 146230 112550 81240 111320 114710 113730 130410 106380 118690 119930 127130 121990 131170 133670 127940 116750 143740 124090 138800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 374090000 20577 178 19250 39023 31298 31298 1 9606 Homo sapiens 0.10091782334347954 PAASLAVHTDK Unmodified 1108.5877 0.58767259 674 B4DNL1;Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DJV5 PWP1 Periodic tryptophan protein 1 homolog yes no 0 0 0 7 0 1 40.768 40.836 3 2.3475E-06 9524 20230619_1887_Aki_TMTPro18x_K_F7 151.26 128.52 72791 57963 66195 75155 84359 87242 72790 77613 102130 86124 89182 86343 106030 82522 67081 101430 105970 101740 67246 53212 68104 74621 85904 87093 74975 80167 101860 86647 92765 87556 105820 86293 71229 101540 100990 96641 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121070000 20578 674 19251 39024 31299 31299 1 9606 Homo sapiens 0.037722265006550515 PAAVVLQTK Unmodified 925.55967 0.55966693 3900;2497;4425 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2;Q9BS14 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 2 0 2 50.274 50.325 3 0.0011709 14586 20230619_1881_Aki_TMTPro18x_K_F2 100.02 79.688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20579 3900;2497;4425 19252 39025;39026 31300;31301 31300 2 9606 Homo sapiens 0.0939094831123839 PADEIAVDR Unmodified 984.48762 0.4876242 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 0 1.5 0.5 1 1 41.232 41.27 2 0.00015489 10434 20230619_1881_Aki_TMTPro18x_K_F2 146.69 116.08 200940 119460 215870 201580 221730 283930 234770 226100 383310 271590 300240 330870 316320 301180 256750 295070 328420 336620 185600 110160 218110 197770 230760 279290 240450 236190 378390 274210 312740 332040 319820 311210 266290 298870 313590 319250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 417740000 20580 1426 19253 39027;39028 31302;31303 31303 2 9606 Homo sapiens -0.005240108331349802 PADVYLIDEPSAYLDSEQR Unmodified 2180.0273 0.027343548 3692 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 1.5 0.5 1 1 62.308 62.313 3 0.076182 19619 20230619_1881_Aki_TMTPro18x_K_F2 36.997 25.735 89517 93349 101060 112550 115660 138150 137020 120280 152940 140860 128150 112860 136850 115580 135710 153090 141250 150500 83004 85556 102030 112400 119600 137330 137320 124680 153930 140470 132960 116020 139350 121160 138420 153030 135160 142940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49274000 20581 3692 19254 39029;39030 31304 31304 1 9606 Homo sapiens -0.015469030431631836 PAEAPTAPSPAQTLENSEPAPVSQLQSR Unmodified 2872.4203 0.4202795 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;Q1WWK5;K7ER14;K7EJ51 SEPT9 Septin-9 yes no 0 0 0 4.5 0.5 1 1 54.969 55.009 3 2.9249000000000002E-61 16206 20230619_1883_Aki_TMTPro18x_K_F4 250.62 229.57 25096 19966 26392 30890 20525 28416 29528 27761 36838 39191 38212 47914 49540 46610 29728 64264 51428 61456 23212 18367 26651 30247 22076 28882 29477 28730 37191 39267 39676 48212 49317 49024 31972 64026 49066 58364 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 87887000 20582 541 19255 39031;39032 31305;31306;31307;31308 31305 4 9606 Homo sapiens 0.058966171629890596 PAEKPAETPVATSPTATDSTSGDSSR Unmodified 2559.1936 0.19363361 3653 P54727;B4DEA3;Q53F10;B7Z4W4;B7ZA74;P54727-2;H0Y579 RAD23B UV excision repair protein RAD23 homolog B yes no 0 0 1 3.5 0.5 1 1 40.374 40.423 4 1.2965E-20 9768 20230619_1882_Aki_TMTPro18x_K_F3 166.36 158.36 59903 35893 49384 55478 60265 69308 61505 61089 81018 65430 75529 78877 77722 67290 62478 70143 87021 68923 55218 33060 51246 54562 61852 68811 62530 63093 81158 66344 77846 79056 78563 69923 65187 70366 82899 65543 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 288270000 20583 3653 19256 39033;39034 31309;31310;31311 31309 3 9606 Homo sapiens -0.02359546396019141 PAETPVATSPTATDSTSGDSSR Unmodified 2133.9662 0.96619985 3653 P54727;B4DEA3;Q53F10;B7Z4W4;B7ZA74;P54727-2;H0Y579 RAD23B UV excision repair protein RAD23 homolog B yes no 0 0 0 2 0 1 39.528 39.598 3 1.8176E-37 9623 20230619_1881_Aki_TMTPro18x_K_F2 219.87 217.36 26914 15546 16926 18689 20337 24971 22072 18226 36829 29813 27286 45670 42181 40027 18868 49675 48560 62159 24764 14282 18090 18693 20978 24617 22583 19413 36306 30025 29185 45409 41539 41975 21409 50357 46269 58857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 315280000 20584 3653 19257 39035 31312 31312 1 9606 Homo sapiens -0.055424598132958636 PAEVGGMQLR Oxidation (M) 1072.5335 0.53352853 3541 P33316-2;H0YNW5;P33316;H0YKC5;H0YNJ9;H0YMM5;H0YKI0 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes no 0 1 0 4.5 0.5 1 1 38.039 38.106 2 0.0071236 8698 20230619_1885_Aki_TMTPro18x_K_F5 80.219 66.841 131660 90292 120290 139360 134710 151310 124370 116050 153960 149210 164090 150940 151630 141200 142300 166600 163140 142930 121530 83109 123460 136750 138610 151240 126940 121950 155580 149140 167230 152880 154800 147220 146150 165640 155750 136080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 234030000 20585 3541 19258 39036;39037 31313;31314 31314 2202 2 9606 Homo sapiens 0.00016311077433783794 PAEVGGMQLR Unmodified 1056.5386 0.53861391 3541 P33316-2;H0YNW5;P33316;H0YKC5;H0YNJ9;H0YMM5;H0YKI0 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 44.955 45.038 2 4.9734E-06 11665 20230619_1886_Aki_TMTPro18x_K_F6 168.27 121.18 192230 146910 199930 182770 158790 220080 170810 154450 210420 252120 238380 230690 252550 189350 212950 276600 239390 230640 177730 134830 201750 182120 168920 218130 172870 164980 213480 248920 243780 233780 255250 201370 219050 273800 228730 219580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 435280000 20586 3541 19258 39038;39039 31315 31315 1 9606 Homo sapiens 0.012606149400653521 PAFGQQHQQQPK Unmodified 1392.6898 0.68984625 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 0 4.5 3.5 1 1 35.147 35.142 3 2.6043E-06 8025 20230619_1880_Aki_TMTPro18x_K_F1 143.5 112.27 46631 29063 52036 49741 66251 70679 63513 61229 73671 56069 70543 70578 67430 52812 62579 65756 67114 63725 43096 26799 52613 48777 67590 69632 64501 63062 74283 57413 72386 70411 68658 55749 63987 65754 64147 60560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52904000 20587 3610 19259 39040;39041 31316;31317 31316 2 9606 Homo sapiens 0.009208925722532513 PAFIFDGR Unmodified 921.47085 0.47085192 3284 O60701;O60701-3;O60701-2;Q9NQ82 UGDH;GDH UDP-glucose 6-dehydrogenase yes no 0 0 0 1 0 1 56.105 56.105 2 0.031162 16880 20230619_1880_Aki_TMTPro18x_K_F1 78.324 58.846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20588 3284 19260 39042 31318 31318 1 9606 Homo sapiens 0.006975330715590644 PAGGDFGEVLNSAANASATTTEPLPEK Unmodified 2643.2664 0.26640462 3659 P55327-2;P55327-4;P55327;P55327-7;P55327-5;P55327-6;P55327-3;E5RK35 TPD52 Tumor protein D52 yes no 0 0 0 5.5 0.5 1 1 61.699 61.751 4 0.077688 18691 20230619_1885_Aki_TMTPro18x_K_F5 39.626 26.949 63599 54074 46893 44326 43057 60599 51096 65738 48752 46282 29135 35256 38117 32157 38135 41733 38724 41979 58695 49437 48964 45856 45379 60163 51021 66205 49064 47456 31273 36171 38629 33795 38831 41786 37068 39857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118260000 20589 3659 19261 39043;39044 31319 31319 1 9606 Homo sapiens 0.010502073975658277 PAGPVQAVPPPPPVPTEPK Unmodified 1874.0302 0.030184501 146 A0A024R1K8;Q15459;Q15459-2;F8WB66;F8WC79 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 8 0 1 53.894 53.965 3 0.00013217 15300 20230619_1888_Aki_TMTPro18x_K_F8 75.97 54.72 50374 45016 52072 55653 53339 61292 53355 50242 63894 61173 58362 58537 59461 50827 61187 67605 66978 66162 46619 41289 52795 55394 55332 61298 54127 52401 64294 61177 60202 59290 60747 53573 62544 67566 64022 62859 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86165000 20590 146 19262 39045 31320;31321 31321 2 9606 Homo sapiens 0.12813061662905056 PAGVLGAVNKPLSATGR Unmodified 1606.9155 0.91548909 3001 G1UI16;Q29RF7;B3KMN2;Q96DB6 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 1 6 0 1 50.728 50.805 3 1.774E-10 14287 20230619_1886_Aki_TMTPro18x_K_F6 144.97 122.5 112610 89999 111880 130430 114960 145980 127910 117700 145620 133820 127100 114800 130400 105220 123480 145850 120270 93979 104110 82724 113900 128510 119680 145700 128740 122670 146610 133870 131350 117160 132610 110960 125630 142970 114920 89908 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53244000 20591 3001 19263 39046 31322 31322 1 9606 Homo sapiens 0.13630796971642667 PAHILQEK Unmodified 934.52362 0.52361577 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 7 0 1 40.924 40.992 3 0.0024674 9672 20230619_1887_Aki_TMTPro18x_K_F7 103.8 82.297 75494 51025 70707 67318 69835 79096 76273 73812 109850 92150 96938 100930 120040 91077 82229 145710 130320 137380 69695 46884 72192 66806 72870 78957 77559 76262 109460 92473 101050 101840 119970 97198 87290 144860 124270 130550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46047000 20592 3152 19264 39047 31323 31323 1 9606 Homo sapiens 0.05373491134378128 PAHLLQDDISSSYTTTTTITAPPSR Unmodified 2672.3293 0.32933923 3216 O00767 SCD Acyl-CoA desaturase yes yes 0 0 0 7 0 1 55.076 55.137 3 3.8894E-05 15815 20230619_1887_Aki_TMTPro18x_K_F7 73.546 68.745 4865.6 4674.1 2754.5 5997.9 0 1678.6 3341.4 3316.8 0 5410.3 4683 6460.7 8517.3 5838.9 5526.7 5021.9 5132.5 6937.3 4487.8 4287.7 2954.2 5888 0 2059.9 3078.1 3339.3 0 5373.4 4764.4 6478.7 8414.4 6009.6 5647.8 5169.4 4927 6562.2 1 1 1 1 0 1 1 1 0 1 1 1 1 1 1 1 1 1 110480000 20593 3216 19265 39048 31324 31324 1 9606 Homo sapiens 0.060067731854815065 PAKYDDIK Unmodified 948.49165 0.49164694 3382;4086 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q5ZEY3 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 1 6.5 0.5 1 1 42.752 42.837 3 0.080881 10643 20230619_1886_Aki_TMTPro18x_K_F6 51.415 3.4772 224800 193890 284810 232690 367680 216470 279170 256390 194010 245060 282300 171680 204520 142840 307140 145850 179890 115370 208400 177810 284990 231820 371050 221620 284180 258910 206270 245810 281590 176870 215640 148630 302580 145390 172900 110140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 619640000 20594 3382;4086 19266 39049;39050 31325 31325 1 9606 Homo sapiens 0.015340786605634094 PALEELRR Unmodified 982.55598 0.55597854 3840 Q59EG8;Q13200;B4DM22;Q9NSM5;H7C2Q3;C9JPC0 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 1 6 0 1 39.338 39.426 3 0.0020988 9287 20230619_1886_Aki_TMTPro18x_K_F6 87.181 70.239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20595 3840 19267 39051 31326 31326 1 9606 Homo sapiens 0.06400278537375925 PALPYLDVDMMDICK Unmodified 1779.8246 0.8245501 4692 Q9UNS2;B4DN01;H7C3P9;Q9UNS2-2;C9JLV5 COPS3 COP9 signalosome complex subunit 3 yes no 0 0 0 7 0 1 64.494 64.523 3 0.022058 19900 20230619_1887_Aki_TMTPro18x_K_F7 54.09 36.173 23313 19583 29264 28030 30465 24574 33071 30164 32333 37004 30772 35392 33077 25506 28240 44666 40726 44539 21606 17994 29235 27574 31519 25261 33171 30621 32962 36957 31779 35663 33457 27665 29584 44509 38872 42291 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33252000 20596 4692 19268 39052 31327 31327 1 9606 Homo sapiens -0.03416919174674149 PAMPQDSVPSPR Oxidation (M) 1296.6132 0.61323542 161 A0A024R1T9;Q4LE36;P53396 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 1 0 5 0 1 37.666 37.758 2 0.0012061 8593 20230619_1885_Aki_TMTPro18x_K_F5 94.409 78.185 18192 12369 14508 16434 12601 16653 12770 11565 15679 13713 23359 22118 23268 17042 16228 29676 24572 26641 16776 11366 15026 16256 13282 16699 12968 12242 16091 14007 23580 21943 23402 18414 17162 29402 23444 25328 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15258000 20597 161 19269 39053 31328 31328 91 1 9606 Homo sapiens -0.023206670392255546 PAMPQDSVPSPR Unmodified 1280.6183 0.6183208 161 A0A024R1T9;Q4LE36;P53396 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 6 0 1 42.831 42.924 2 1.6554E-06 10744 20230619_1886_Aki_TMTPro18x_K_F6 152.64 125.68 43218 32102 40564 44953 43375 48706 46633 41541 57381 53321 54365 64190 73051 54829 51279 63194 76676 78611 39919 29504 41498 44370 44946 48794 47150 43276 57745 53608 56783 64321 72906 57363 53990 64191 73130 74495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39217000 20598 161 19269 39054 31329 31329 1 9606 Homo sapiens -0.010763631766167236 PANKQEDEVMR Oxidation (M) 1331.614 0.6139637 2206 Q2LE71;B2R4D5;O15145;B4DM63 ARPC3 Actin-related protein 2/3 complex subunit 3 yes no 0 1 1 2.5 0.5 1 1 32.391 32.457 3 0.063398 6517 20230619_1882_Aki_TMTPro18x_K_F3 49.081 40.776 59057 38217 58021 65520 93871 94079 66738 63668 79940 80858 91483 76754 77947 65622 75436 71133 74156 63792 54529 35235 59589 64214 93889 92254 69274 67598 81185 80705 92618 77746 79838 68345 76656 71016 70893 60706 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82145000 20599 2206 19270 39055;39056 31330 31330 1376 1 9606 Homo sapiens -0.03857872390199191 PANKQEDEVMR Unmodified 1315.619 0.61904908 2206 Q2LE71;B2R4D5;O15145;B4DM63 ARPC3 Actin-related protein 2/3 complex subunit 3 yes no 0 0 1 3 0.816 1 1 1 36.155 36.208 3 2.9347E-09 8055 20230619_1882_Aki_TMTPro18x_K_F3 186.02 168.8 150590 107490 150220 170170 219030 238410 163100 163300 217530 217930 225030 217860 221180 171950 189500 213510 212880 164110 139140 98955 153760 167410 220640 234110 169390 173450 218960 217390 230250 219580 224240 181070 194660 211100 203120 156570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188610000 20600 2206 19270 39057;39058;39059 31331 31331 1 9606 Homo sapiens -0.026135685275903597 PAPDETSFSEALLK Unmodified 1503.7457 0.74568938 2621 B4DY09;Q53FG3;F4ZW62;Q12905;X6R6Z1;A0A0A0MRL0 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 4 0 1 60.391 60.393 3 0.00051353 18511 20230619_1883_Aki_TMTPro18x_K_F4 89.231 76.25 49064 52025 77208 54939 89537 66228 73911 77736 68187 47747 60042 56963 65605 52175 75476 70907 71974 77455 45667 47621 76095 55484 91241 66480 75302 77793 69425 50149 62256 57344 67229 54993 76357 71327 68936 73477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26009000 20601 2621 19271 39060 31332 31332 1 9606 Homo sapiens 0.013966361785833215 PAPLLESPFK Unmodified 1097.6121 0.61209643 1129 O00203;O00203-3;A0A0S2Z5J4;A8K586;A0A8Q3WKJ9;A0A8Q3WL34;A0A8Q3SIS1;A0A8Q3SHS3;A0A8Q3WKK0;A0A8Q3SHW6;A0A8Q3SHR2;A0A8Q3SI03;A0A8Q3WKN2;A0A8Q3SIM7;A0A8Q3WKF8;A0A8Q3SHU2;A0A0S2Z4Z4;A0A8Q3WKI5;Q3MNE1;A0A8Q3SHP3;B4E0B2 AP3B1 AP-3 complex subunit beta-1;AP-3 complex subunit beta yes no 0 0 0 1 0 1 60.482 60.482 3 0.0069178 18685 20230619_1880_Aki_TMTPro18x_K_F1 70.552 53.116 18421 12760 14582 18203 16028 19608 19009 17313 25533 24411 22880 27958 29089 28332 21326 38618 31098 29512 16988 11734 15179 17942 16650 19660 19184 18044 25545 24412 23897 28242 29161 29721 22458 38082 29649 28132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24631000 20602 1129 19272 39061 31333 31333 1 9606 Homo sapiens 0.06719486654174034 PAPPKPEPK Unmodified 959.54402 0.54401687 3390 P05204;A0A994J3W4;A0A087WZE9;Q15651-2;Q15651 HMGN2;HMGN3 Non-histone chromosomal protein HMG-17;High mobility group nucleosome-binding domain-containing protein 3 yes no 0 0 1 7.5 0.5 1 1 38.827 38.853 3 0.009905 8807 20230619_1887_Aki_TMTPro18x_K_F7 78.655 56.569 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20603 3390 19273 39062;39063 31334;31335 31334 2 9606 Homo sapiens 0.06262661794175983 PAPPKPEPKPK Unmodified 1184.6917 0.69174374 3390 P05204 HMGN2 Non-histone chromosomal protein HMG-17 yes yes 0 0 2 2 0 1 39.257 39.323 4 0.026052 9458 20230619_1881_Aki_TMTPro18x_K_F2 64.439 54.751 198960 154570 195540 210250 248830 234580 218820 198880 248370 209430 259630 217620 211890 164660 242290 153350 188610 148770 183890 141990 199750 208000 253160 234630 223270 206020 251630 211430 263530 218750 218990 171050 242370 154380 180700 141500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59646000 20604 3390 19274 39064 31336 31336 1 9606 Homo sapiens 0.10678553328148155 PAPPKPEPR Unmodified 987.55016 0.55016488 78 A0A024R046;O00479 HMGN4 High mobility group nucleosome-binding domain-containing protein 4 yes no 0 0 1 7.5 0.5 1 1 34.857 34.891 3 0.0057312 7414 20230619_1888_Aki_TMTPro18x_K_F8 76.17 55.84 119190 76983 115110 139430 138380 155840 139720 135590 183050 143320 152760 158160 172970 141930 125160 148930 192820 169480 110040 71033 117770 135740 142030 155770 142090 140160 182730 144990 159010 159300 173670 147360 131950 150640 183670 160840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154680000 20605 78 19275 39065;39066 31337;31338 31338 2 9606 Homo sapiens 0.0558918002569726 PAPQPPVPRPEHCEGAAAGLK Unmodified 2178.1004 0.10040611 3004 G3V1B8;H0YEB6;O60232 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 yes no 0 0 1 7.5 0.5 1 1 41.668 41.703 4 5.1844E-09 10186 20230619_1888_Aki_TMTPro18x_K_F8 120.71 108.92 57634 39779 57790 70798 54274 71732 58116 59348 74472 67220 64379 63453 68191 54749 58410 79520 75277 70249 53242 36684 58727 68882 56877 72105 58895 61717 74540 67426 66677 64323 69015 58078 60614 78926 71827 66840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84496000 20606 3004 19276 39067;39068 31339;31340 31340 2 9606 Homo sapiens 0.058479919891397 PAPSAQPAPPPHPPSR Unmodified 1602.8267 0.82667409 4395 Q96SB3 PPP1R9B Neurabin-2 yes yes 0 0 0 7.67 0.471 1 2 34.121 34.16 3 6.3637E-06 7188 20230619_1888_Aki_TMTPro18x_K_F8 84.508 71.877 8845.5 7220.6 10172 10023 12424 13828 11473 10042 12684 10993 11263 12401 11130 6775.7 10406 9084.2 14031 11800 8189.2 6633.1 10256 9937 12699 13604 11658 10549 12796 11104 11625 12323 11316 7312.9 10785 9246.9 13374 11187 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20030000 20607 4395 19277 39069;39070;39071 31341;31342 31341 2 9606 Homo sapiens 0.049373817319747104 PAPVAQPPAAAPPSAVGSSAAAPR Unmodified 2137.128 0.12800107 4758 Q9Y6H1;Q5T1J5 CHCHD2;CHCHD2P9 Coiled-coil-helix-coiled-coil-helix domain-containing protein 2;Putative coiled-coil-helix-coiled-coil-helix domain-containing protein CHCHD2P9, mitochondrial yes no 0 0 0 4.5 3.5 1 1 45.701 45.72 3 3.5293E-26 12598 20230619_1880_Aki_TMTPro18x_K_F1 174.22 164.3 38418 23393 36334 43589 40120 42180 34700 28731 42220 45832 70341 65484 53817 53391 51246 54322 52268 73995 35452 21601 37172 42285 41230 42435 35556 30793 43670 46012 70076 65191 55357 55503 52241 55665 50151 69993 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 268390000 20608 4758 19278 39072;39073 31343;31344 31343 2 9606 Homo sapiens 0.10492218520994356 PAPYWEGTAVIDGEFK Unmodified 1778.8516 0.85155143 3838 V9HW63;Q13162;A6NG45;A6NJJ0 HEL-S-97n;PRDX4 Peroxiredoxin-4 yes no 0 0 0 5.5 0.5 1 1 62.532 62.581 3 9.8964E-06 19082 20230619_1885_Aki_TMTPro18x_K_F5 103.21 93.93 189770 149920 161270 170790 190330 235550 173740 226300 304810 267780 249850 311590 314170 297720 200480 342130 338640 426740 175220 137460 166700 171650 195520 233010 180260 232700 300980 269870 261960 313730 313590 309910 214290 347350 323280 404100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 667750000 20609 3838 19279 39074;39075 31345;31346 31345 2 9606 Homo sapiens -0.006720279759747427 PAQPQEHPFASSR Unmodified 1450.6953 0.69532556 1375 B4DRA5;B4DJW8;A0A2R8YFH5;Q15437;Q5QPE2 SEC23B Protein transport protein Sec23B yes no 0 0 0 6 0.816 1 1 1 33.267 33.338 3 1.0287E-11 6898 20230619_1885_Aki_TMTPro18x_K_F5 191.48 171.8 22802 17523 24692 31914 32423 33910 29494 27166 34678 30561 34199 36138 37139 24536 27411 31928 35171 36545 21091 16158 25084 31031 32973 33968 30062 28330 35012 30881 35239 36030 37305 26120 28497 32209 33586 34657 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 120410000 20610 1375 19280 39076;39077;39078 31347;31348 31347 2 9606 Homo sapiens -0.01199428635914046 PARPNLSGSSAGSPLSGLGGEGPGESEK Unmodified 2594.2572 0.25723692 4756 Q9Y6C2 EMILIN1 EMILIN-1 yes yes 0 0 1 6 0 1 48.723 48.802 4 7.661000000000001E-29 13419 20230619_1886_Aki_TMTPro18x_K_F6 184.94 170.78 24104 19086 25788 35272 31924 31218 29805 29240 35139 41256 49389 58880 49749 40148 49379 54129 51329 53949 22297 17601 26201 34194 32586 31821 30350 30357 36085 41564 50087 58314 50724 42761 50354 54147 49111 51233 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129320000 20611 4756 19281 39079 31349 31349 1 9606 Homo sapiens 0.023878588317984395 PASGPIRPIVR Unmodified 1161.6982 0.6982261 2040 Q6NZ55;A8K4C8;P26373;J3QSB4;P26373-2 RPL13 60S ribosomal protein L13 yes no 0 0 1 6 0.707 1 2 1 37.774 37.851 2;3 3.05E-06 8641 20230619_1886_Aki_TMTPro18x_K_F6 152.04 128.69 410550 277340 371530 353470 362850 485720 418200 371750 451330 467530 426750 440970 576900 386720 401200 634850 513170 488370 378910 254730 380530 352400 379840 478270 419430 390240 457320 466670 445530 447340 575090 414100 418520 625030 489740 465500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2296500000 20612 2040 19282 39080;39081;39082;39083 31350;31351 31351 2 9606 Homo sapiens 0.12384491279544818 PASISEEELLNLINK Unmodified 1668.8934 0.89341625 1651 A0A7I2V2U6;B2R7W0;P13995;P13995-2;A0A7I2YQD4;A0A7I2V482 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes no 0 0 0 5.5 0.5 1 1 64.331 64.377 3 1.2073E-10 20088 20230619_1886_Aki_TMTPro18x_K_F6 155.02 140.04 14034 8907 12666 12328 9568.4 9962.5 9644.9 14487 12636 17885 14609 17657 16359 16990 18724 24474 19073 20069 12948 8190.8 12927 12144 10191 10357 9836.8 14564 12814 17870 15001 17914 16776 17922 19050 24210 18253 19104 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192310000 20613 1651 19283 39084;39085 31352 31352 1 9606 Homo sapiens 0.08572527712590272 PASPATETVPAFSER Unmodified 1558.7627 0.76273643 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 0 4 0 1 47.811 47.851 2 2.0599E-13 13007 20230619_1883_Aki_TMTPro18x_K_F4 166.7 140.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20614 1229 19284 39086 31353 31353 1 9606 Homo sapiens 0.005705567843506287 PASWADIASK Unmodified 1044.524 0.52400971 2661 B5BU99;Q9Y5A9;Q9Y5A9-2 YTHDF2 YTH domain-containing family protein 2 yes no 0 0 0 8 0 1 55.76 55.822 3 0.0026228 16061 20230619_1888_Aki_TMTPro18x_K_F8 89.679 68.306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20615 2661 19285 39087 31354 31354 1 9606 Homo sapiens 0.003528660635538472 PATFTVNTK Unmodified 977.5182 0.51819605 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5F3 FLNA;FLJ00119 Filamin-A yes no 0 0 0 2 0 1 47.557 47.632 3 0.0030602 13336 20230619_1881_Aki_TMTPro18x_K_F2 83.647 58.21 46343 29542 48045 51992 45669 63337 51499 52447 82456 66936 65342 86652 91983 84020 58073 108670 107970 122500 42806 27249 48669 50762 47939 62866 52533 54725 81552 67539 69108 86980 91535 88044 62685 109400 102920 116160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45712000 20616 3484 19286 39088 31355 31355 1 9606 Homo sapiens 0.02853767551891906 PATSHAEPTTADYPK Unmodified 1584.742 0.74200098 3860 Q13585 GPR50 Melatonin-related receptor yes yes 0 0 0 4 0 1 38.066 38.109 3 0.00017794 8762 20230619_1883_Aki_TMTPro18x_K_F4 103.76 86.882 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20617 3860 19287 39089 31356 31356 1 9606 Homo sapiens -0.02698033595288507 PAVAILSFK Unmodified 944.5695 0.56950333 2150 B3KMC2;B3KMD2;A8KAE0;O75717-2;O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes no 0 0 0 5 0 1 61.992 62.04 3 0.033393 18848 20230619_1885_Aki_TMTPro18x_K_F5 48.283 0 37553 29709 37764 40358 34300 44150 38491 40843 45566 39611 37218 34429 37617 28927 43167 34432 36079 31833 34719 27288 38313 39923 36072 44255 38799 41915 45680 39950 38595 35001 38617 30328 43356 34401 34559 30278 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47124000 20618 2150 19288 39090 31357 31357 1 9606 Homo sapiens 0.09500136316603403 PAVLQVECHPYLAQNELIAHCQAR Unmodified 2816.385 0.38503716 3450 V9HWI0;P14550 HEL-S-165mP;AKR1A1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 8 0 1 51.293 51.37 4 3.43E-34 14101 20230619_1888_Aki_TMTPro18x_K_F8 197.92 190.47 26003 22686 24333 25116 25474 27744 29016 25861 32956 27803 32170 28985 30003 26937 29989 28837 28805 30849 24041 20787 24881 25208 26468 27822 29165 26613 33295 28046 32931 29314 30695 27951 30425 29068 27586 29271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45440000 20619 3450 19289 39091 31358 31358 1 9606 Homo sapiens 0.04950004620559412 PAVVAPAPVVEAVSTPSAAFPSDATAENVK Unmodified 2891.4917 0.49165353 3823 Q12906-7;F4ZW66;Q12906-4;Q12906-6 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 7 0 1 62.328 62.364 4 8.6299E-06 18874 20230619_1887_Aki_TMTPro18x_K_F7 75.326 68.05 64061 57524 71131 66130 45885 63817 62471 75390 69288 73363 67961 80990 77148 73788 66244 98007 88126 97647 59325 52723 71269 66098 50192 64949 62320 76133 70185 74451 70281 81637 78016 77590 68941 97975 84173 92714 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 651240000 20620 3823 19290 39092 31359 31359 1 9606 Homo sapiens 0.12156736867655127 PAVVTVGDFPEEDYGLDEI Unmodified 2063.9575 0.95753265 1550 A0A494C0X0;Q99426-2;Q99426 TBCB Tubulin-folding cofactor B yes no 0 0 0 1.5 0.5 1 1 65.989 65.993 3 0.0091703 20916 20230619_1880_Aki_TMTPro18x_K_F1 59.862 56.083 4925.4 2395.1 3357.2 3784.7 3610.4 2660.1 4018.3 4829.5 5072.2 6079 5908.8 6675.9 6536.8 6400.2 4997.9 6517.4 7040.2 8862.7 4530.8 2209.3 3545.2 3694.1 3736.2 2827.1 4063 4814.8 5146.6 6090.9 6053.7 6737 6585.8 6617.6 5230.9 6673.6 6728.9 8386.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23155000 20621 1550 19291 39093;39094 31360 31360 1 9606 Homo sapiens -0.03188781711787669 PAYFQRPENALK Unmodified 1432.7463 0.7462985 3152 J9R021;Q14152;Q24JU4;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 2 0 1 47.089 47.165 3 0.0012577 13091 20230619_1881_Aki_TMTPro18x_K_F2 89.189 66.873 325820 234600 291450 331360 329260 389280 352450 318590 394470 310860 297640 252430 315230 254790 327980 372250 337080 243110 300780 215660 299780 327250 339950 387460 355170 330260 395470 313090 310500 259380 321760 268860 334010 364870 321780 232620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148800000 20622 3152 19292 39095 31361 31361 1 9606 Homo sapiens 0.04723520408947479 PCCYIFPGGR Unmodified 1225.5372 0.5372337 630;2915 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6;E9PGC8;P78559;P78559-2;A8K4T7;Q7Z5F9;Q504X9 MAP1B;MAP1A Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1;Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 no no 0 0 0 3.5 0.5 1 1 51.953 52 2 0.0374 14808 20230619_1883_Aki_TMTPro18x_K_F4 68.214 56.724 111050 77271 96283 125450 102210 116380 117790 111600 116630 137960 122650 148210 158770 146240 101560 198860 169030 193650 102470 71166 99311 122500 106150 118200 117830 115110 119300 138300 127250 149950 158340 153640 108550 198380 161250 183900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223790000 20623 630;2915 19293 39096;39097 31362 31362 1 9606 Homo sapiens -0.06651342420332185 PCHGQEPHGAATQGPLAK Unmodified 1854.8795 0.87951429 4300 Q92618;Q2YDX2;A0A087WUJ4 ZNF516 Zinc finger protein 516 yes no 0 0 0 7 0 1 34.105 34.187 4 1.8315E-09 7002 20230619_1887_Aki_TMTPro18x_K_F7 133.45 124.45 4098.2 2129.5 4381.3 4808.1 5263.9 4949.2 5209.3 4769.5 7202.3 6832.1 5383 7140.2 8306 8139.1 5525.2 10121 7580.3 10083 3783 1974.2 4442.2 4632.1 5391.9 4987.9 5314.2 4941.6 7159 6808.4 5745.7 7267.5 8263.1 8463 5807.2 10122 7250.2 9568.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4132500 20624 4300 19294 39098 31363 31363 1 9606 Homo sapiens -0.013730282675169292 PCSEETPAISPSK Unmodified 1401.6446 0.64459513 3541 P33316-2;H0YNJ9 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes no 0 0 0 4 0 1 44.038 44.082 3 1.0893E-15 11297 20230619_1883_Aki_TMTPro18x_K_F4 167.71 156.86 133650 95466 134870 139610 166920 165940 156100 131820 168730 147500 154100 180640 170750 159610 167940 187020 220590 221440 123490 87799 137390 137630 170400 165030 158350 137550 170600 149330 159750 181120 173790 166750 173820 189360 210560 209960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191780000 20625 3541 19295 39099 31364 31364 1 9606 Homo sapiens -0.04016138795805091 PCYATLFGPK Unmodified 1152.5638 0.56376603 3639 Q53FN1;P52943;H0YFA4;P52943-2 CRIP2 Cysteine-rich protein 2 yes no 0 0 0 4 0 1 58.02 58.024 3 2.3679E-05 17534 20230619_1883_Aki_TMTPro18x_K_F4 127.3 120.1 62392 51743 61914 65110 51664 71605 73230 73231 97297 91831 75835 99384 108180 100850 79121 156860 120060 119240 57693 47480 62828 64748 55204 71912 73311 75191 96948 92076 80368 100650 108130 106830 83660 154380 114470 113660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91970000 20626 3639 19296 39100 31365 31365 1 9606 Homo sapiens -0.006413302573719193 PDYLGADQR Unmodified 1033.4829 0.48287317 1235 C9JX88;A0A140VK70;P35998;C9JLS9;B7Z571 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 2.5 0.5 1 1 41.216 41.284 2 8.9005E-06 10138 20230619_1882_Aki_TMTPro18x_K_F3 175.91 121.3 146250 111510 136640 153590 149200 176640 166880 146580 209430 214600 206970 209050 224580 185540 166170 234570 219260 209010 135110 102460 139920 151870 154630 176140 168480 153700 210940 213130 213170 211660 225880 194750 173300 233310 209200 198830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 160480000 20627 1235 19297 39101;39102 31366 31366 1 9606 Homo sapiens -0.03252894975912568 PDYLGADQRK Unmodified 1161.5778 0.57783619 1235 C9JX88;A0A140VK70;P35998;C9JLS9;B7Z571 PSMC2 26S protease regulatory subunit 7 yes no 0 0 1 6.5 0.5 1 1 40.366 40.446 3 0.0037592 9691 20230619_1886_Aki_TMTPro18x_K_F6 69.786 51.006 113450 99317 114960 111320 135640 123080 118940 111010 128050 137070 143200 128800 146120 109500 118160 159310 156830 115060 104960 91014 116900 111640 138590 123410 121210 114960 130640 136870 146210 130580 147640 116220 122990 156710 149390 109910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88857000 20628 1235 19298 39103;39104 31367 31367 1 9606 Homo sapiens 0.003510384952505774 PEFLEDPSVLTK Unmodified 1373.7078 0.70784731 3578;668;675 A0A024RBE7;P42167;G5E972;P42167-3;A0A024RBH7;P42167-2;P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 0 0 0 5.2 0.748 1 2 2 61.801 61.843 2;3 9.6357E-10 19072 20230619_1883_Aki_TMTPro18x_K_F4 174.84 135.21 657300 535490 682920 763710 616090 773900 711720 676660 712570 856100 824630 808650 869250 726700 753240 994180 830140 927110 607970 492070 691190 752270 648310 779180 712390 703060 731130 853950 842630 820580 880140 766500 773630 990250 794200 880930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1511399999.9999998 20629 668;675;3578 19299 39105;39106;39107;39108;39109 31368;31369;31370 31368 3 9606 Homo sapiens 0.03594169983739448 PEINTNHLDK Unmodified 1179.5884 0.58840088 3872 Q13907 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 yes yes 0 0 0 4 0 1 40.73 40.773 3 0.00013024 9871 20230619_1883_Aki_TMTPro18x_K_F4 117.2 91.962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20630 3872 19300 39110 31371 31371 1 9606 Homo sapiens 0.005790211497014752 PEIVDTCSLASPASVCR Unmodified 1860.871 0.87098302 1222 A0A140VK27;P09960;P09960-2;B4DEH5 LTA4H Leukotriene A-4 hydrolase yes no 0 0 0 5.5 0.5 1 1 53.172 53.246 3 2.4441E-13 15249 20230619_1886_Aki_TMTPro18x_K_F6 147.53 130.03 37663 28245 37065 37559 30106 38857 38747 40013 45906 43559 40392 46509 51774 40606 41053 48811 47014 48743 34803 25944 37607 37185 32107 39200 38800 40891 46154 43923 42236 46863 51953 42530 42305 48894 44937 46291 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209930000 20631 1222 19301 39111;39112 31372 31372 1 9606 Homo sapiens -0.02501763018995007 PENVAPR Unmodified 781.40825 0.40825167 3622 P50991;A8K3C3;P50991-2 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 3 0.816 1 1 1 32.47 32.536 2 0.037427 6565 20230619_1882_Aki_TMTPro18x_K_F3 91.9 32.919 42493 20877 54622 55149 71991 76457 50364 64040 54642 45881 74252 81426 63102 61515 70988 33039 76249 71743 39287 19422 54726 53079 72772 75340 52247 65768 56156 48422 74839 80302 65170 62601 72117 35962 72872 67748 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52582000 20632 3622 19302 39113;39114;39115 31373;31374 31373 2 9606 Homo sapiens 0.008803870033716521 PFAIAKE Unmodified 774.42759 0.42759012 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 0 1 8 0 1 51.96 52.038 2 0.049376 14375 20230619_1888_Aki_TMTPro18x_K_F8 95.62 56.078 634340 422400 541280 649550 599340 739520 606930 598930 898250 803040 785850 1065000 1032600 853320 579760 1355600 1146700 1046400 585160 388840 559170 637920 619580 737310 620390 627290 894300 808980 823550 1062100 1025100 913050 633070 1334400 1091000 997550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196560000 20633 1716 19303 39116 31375 31375 1 9606 Homo sapiens 0.031353432942864856 PFEDASFALR Unmodified 1151.5611 0.56112349 3855 Q13526;K7EN45;Q49AR7 PIN1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 yes no 0 0 0 4.5 1.12 1 1 1 1 58.368 58.408 2 5.5865E-07 17222 20230619_1885_Aki_TMTPro18x_K_F5 186.16 148.02 151250 111410 122980 151780 106700 125590 127400 127110 167760 175930 161650 189030 220650 196020 130620 282820 263220 272920 139550 102370 127210 149570 112880 129000 128530 131130 168520 175630 168790 191660 219280 206510 142570 281750 250630 259290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 161210000 20634 3855 19304 39117;39118;39119;39120 31376;31377 31376 2 9606 Homo sapiens -0.008594623906901688 PFETLLSQNQGGK Unmodified 1417.7201 0.72014333 3419;2729 C7DJS2;V9HWE9;P09211;C7DJS1;A0A087X243 GSTP1;HEL-S-22 Glutathione S-transferase P no no 0 0 0 2 0.816 1 1 1 59.845 59.859 3 2.1425E-16 18258 20230619_1880_Aki_TMTPro18x_K_F1 215.85 182.09 167440 114560 131260 148730 125260 179480 140300 139900 247980 208680 190260 327170 342430 334280 150670 492640 413190 599070 154390 105240 136400 147730 131640 178140 143870 147570 244320 211070 205230 327060 336230 352870 173030 497230 394090 567190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1006699999.9999999 20635 2729;3419 19305 39121;39122;39123 31378 31378 1 9606 Homo sapiens 0.027992064467980526 PFEVPFLK Unmodified 975.54295 0.54295423 1968 A6NFX8;Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes no 0 0 0 2.5 0.5 1 1 63.26 63.28 2 0.010214 20086 20230619_1881_Aki_TMTPro18x_K_F2 109.01 58.046 393920 294810 335550 360160 285090 425160 294210 306640 478200 464640 435470 591630 708420 617140 369050 905900 697710 859750 363600 270550 345160 359110 301800 422050 301940 325760 475450 465370 461330 596030 698760 650800 402420 901320 665500 816490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 319890000 20636 1968 19306 39124;39125 31379 31379 1 9606 Homo sapiens 0.05420447425274233 PFEVPFLKF Unmodified 1122.6114 0.61136815 1968 A6NFX8;Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes no 0 0 1 3 0 1 65.555 65.589 2 0.086773 20774 20230619_1882_Aki_TMTPro18x_K_F3 67.032 44.202 24003 29075 26555 25511 22662 26169 20754 23773 36745 25543 20737 24140 27866 20333 23350 28011 25610 23641 22281 26566 26692 26095 23833 26382 21541 24495 35878 25705 22357 24432 27987 21516 23972 27768 24468 22508 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8183500 20637 1968 19307 39126 31380 31380 1 9606 Homo sapiens 0.05496692005135628 PFFHSLSEK Unmodified 1090.5447 0.54474515 3097 H9ZYJ2;P10599 TXN Thioredoxin yes no 0 0 0 1.5 0.5 1 1 49.683 49.712 3 5.6431E-11 14254 20230619_1881_Aki_TMTPro18x_K_F2 218.55 146.11 488060 389000 466770 535220 493950 548530 480690 471970 516090 425880 418460 440530 441540 396310 409610 552090 501320 492650 451060 357340 476700 528420 510650 551810 486630 486460 519800 433550 435150 445330 448710 418300 422940 548530 478710 468580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1808999999.9999998 20638 3097 19308 39127;39128 31381;31382 31382 2 9606 Homo sapiens 0.003094564432331026 PFGSEEQLLPVEK Unmodified 1471.7559 0.75586013 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9;O75643-2 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 4.5 0.5 1 1 60.904 60.931 3 5.725E-05 18278 20230619_1885_Aki_TMTPro18x_K_F5 91.093 78.326 62661 49806 61880 61939 50051 68865 70172 60053 66020 68507 70171 72889 77422 65798 65184 87752 70719 82547 57925 45704 62772 61648 53545 68876 69456 62223 67670 68921 72138 73584 78205 69257 66937 87468 67692 78416 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 327610000 20639 3312 19309 39129;39130 31383 31383 1 9606 Homo sapiens 0.03885243903778246 PFLDIQK Unmodified 859.48035 0.48035398 3270 Q6IBA0;O43920 NDUFS5 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 yes no 0 0 0 1 0 1 57.002 57.002 3 0.074531 17273 20230619_1880_Aki_TMTPro18x_K_F1 49.058 13.425 30433 25304 29017 32403 39430 40281 31225 32381 42951 31948 38487 47392 29521 33099 40446 35912 31272 41961 28132 23223 29763 32230 39913 39960 32324 33622 42876 32801 39382 46890 30979 34719 40411 36401 30083 39751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22516000 20640 3270 19310 39131 31384 31384 1 9606 Homo sapiens 0.04499301357100194 PFLFDTK Unmodified 866.4538 0.45380487 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2;A0A7P0Z484;A0A7P0TAR9;A0A7P0Z4H2;Q16094;Q6ZP56;D6RFL1;A0A7P0TAN9;A0A7P0T8N1 CANX Calnexin yes no 0 0 0 3.67 3.09 1 1 1 59.831 59.848 2 0.0062973 18542 20230619_1881_Aki_TMTPro18x_K_F2 134.12 71.283 243550 156430 171530 228940 151330 244200 183630 201030 409710 318080 312740 624720 596110 616160 229880 1134200 804370 1462400 224350 143940 180350 225240 160960 244530 190170 211660 400730 324980 339400 620640 583660 663150 277200 1146400 768620 1383100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 200170000 20641 1700 19311 39132;39133;39134 31385;31386;31387 31386 3 9606 Homo sapiens 0.015236124657462824 PFLGIGLK Unmodified 843.52182 0.52182486 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 0 0 5 0.816 1 1 1 61.804 61.839 2 0.0021669 18759 20230619_1885_Aki_TMTPro18x_K_F5 146.21 39.927 268890 173000 250320 223940 189310 364090 236360 219900 465990 284810 254550 487830 579350 518520 232610 839150 750000 1154500 248160 158960 254920 223710 204510 353780 242510 236450 453060 291320 286430 487410 565520 551150 274670 853410 715400 1091700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112830000 20642 3904 19312 39135;39136;39137 31388 31388 1 9606 Homo sapiens 0.09380482116421263 PFLLPVEAVYSVPGR Unmodified 1642.9083 0.90827845 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 3.5 0.5 2 2 64.521 64.542 2;3 4.3225E-18 20340 20230619_1882_Aki_TMTPro18x_K_F3 221.09 181.38 73298 58726 80261 99380 67217 92450 80302 82700 83427 99266 92944 98223 115710 95612 84052 117090 104050 120050 67821 54085 80891 96834 71317 93689 80359 85637 85302 99386 95920 99679 115860 99876 87318 117380 99475 113930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 567170000 20643 1417 19313 39138;39139;39140;39141 31389;31390 31389 2 9606 Homo sapiens 0.11254064371200911 PFLWLAR Unmodified 901.51741 0.51740818 2668 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 RAN GTP-binding nuclear protein Ran yes no 0 0 0 7 0.816 1 1 1 62.993 63.022 2 0.0044603 19068 20230619_1888_Aki_TMTPro18x_K_F8 148.12 128.48 1109800 959560 1092500 1060000 1055600 1339300 1158000 1057400 1516700 740750 598380 362560 376850 353880 949020 595770 548990 249890 1026500 879270 1110700 1066200 1104100 1326400 1172000 1091400 1485800 756010 646920 386000 419240 377740 930870 576710 527070 242110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1914499999.9999998 20644 2668 19314 39142;39143;39144 31391;31392;31393 31393 3 9606 Homo sapiens 0.06271017693518388 PFPDFVYK Unmodified 1011.5066 0.50656873 1284 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q8NAN9 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 0 0 0 1 0 1 61.604 61.604 2 0.038792 19120 20230619_1880_Aki_TMTPro18x_K_F1 84.244 61.224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20645 1284 19315 39145 31394 31394 1 9606 Homo sapiens 0.001275705285706863 PFPDGLAEDIDKGEVSAR Unmodified 1914.9323 0.93232095 3447 P13639;Q8TA90;B4DPU3;Q6W6M8 EEF2 Elongation factor 2 yes no 0 0 1 4.5 0.5 1 1 57.193 57.225 3 1.5985E-09 17203 20230619_1883_Aki_TMTPro18x_K_F4 133.94 109.05 137680 106120 133630 116560 107130 95241 125750 112980 126490 78769 72728 64284 69570 53469 100600 73745 71531 66216 127230 97275 135540 116700 113680 98441 125750 113360 126530 81054 77045 65609 72539 56615 99998 73449 68685 62992 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 96344000 20646 3447 19316 39146;39147 31395;31396 31395 2 9606 Homo sapiens 0.011452082762389182 PFPGSVNQPATPFSPTR Unmodified 1798.9002 0.90023296 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;H0Y9Y3;Q9UMS6;Q9UMS6-3;B4DLE4;Q9UMS6-5 SYNPO2 Synaptopodin-2 yes no 0 0 0 3 0.816 1 1 1 54.941 54.968 3 3.2891E-10 16264 20230619_1883_Aki_TMTPro18x_K_F4 143.93 124.85 56725 49698 55695 50273 58793 56057 64452 51456 74509 57442 60697 50741 56598 48208 66002 61060 56559 49387 52467 45503 56669 50843 60913 56198 64932 53080 74729 57580 62705 51777 58337 50479 66400 60525 54157 47058 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104740000 20647 4686 19317 39148;39149;39150 31397 31397 1 9606 Homo sapiens 0.032738853837827264 PFSLQETYEAK Unmodified 1311.6347 0.63468237 1492;3875 D6RGI3;A0A384P5S0;D6RER5;Q9NVA2;Q9NVA2-2;D6RDU5;Q96KC0;H0Y961;Q14141;Q541S4;Q548C9;B1AMS2;Q6B514;B4DZW0;Q8NFH9;Q14141-2;Q14141-4;B4E049;Q8NFI2;Q8NFI0 SEPT11;SEPT6 Septin-11;Septin-6 no no 0 0 0 6 0 1 55.865 55.94 3 7.2211E-05 16458 20230619_1886_Aki_TMTPro18x_K_F6 124.42 109.79 48345 38588 42872 49958 39946 49679 45398 49355 73604 65455 63780 89262 97709 92120 48349 140220 110150 162970 44654 35424 44009 49504 41985 50235 46332 50882 73014 66060 67485 89700 96449 97461 53974 141080 105160 154360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74676000 20648 1492;3875 19318 39151 31398 31398 1 9606 Homo sapiens -0.008669587388794753 PFSNSHNALK Unmodified 1113.5567 0.55670682 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;G3V4N7;G3V2I1 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 0 3.25 1.09 1 2 1 38.445 38.519 3;4 0.00019462 10200 20230619_1881_Aki_TMTPro18x_K_F2 118.77 108.12 437280 338570 482090 496150 517580 506520 480880 466370 474570 490200 528260 504900 453010 392780 472370 492570 557900 524010 404540 311280 486480 488080 533070 510540 487040 480020 486120 494470 536120 508160 465780 414160 484820 495090 532730 497500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 509310000 20649 3441 19319 39152;39153;39154;39155 31399;31400;31401 31399 3 9606 Homo sapiens 0.0044707318641030724 PFTCLDGSATIPFDQVNDDYCDCK Unmodified 2837.1619 0.16188125 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;K7EPW7;A0A7I2V2T6;K7EKX1;K7EJ70;K7EIP3;K7EL27 PRKCSH Glucosidase 2 subunit beta yes no 0 0 0 5 0.816 1 1 1 63.166 63.2 4 1.0589999999999999E-19 19377 20230619_1885_Aki_TMTPro18x_K_F5 162.85 156.05 61786 45283 56251 63055 50691 77770 58390 58677 79726 102660 106780 131650 124720 116830 74947 151780 129910 172780 57053 41618 57583 62371 53527 77023 59120 62449 81196 102260 109160 131800 124480 122820 80564 152880 124070 163730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220120000 20650 444 19320 39156;39157;39158 31402 31402 1 9606 Homo sapiens -0.1832132173744867 PFYYQHPER Unmodified 1235.5724 0.57235688 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;A0A7I2V3I5;A0A7I2V2T9;A0A7I2V3J7;A0A7I2V682;A0A7I2V407;A0A7I2V2J0;A0A7I2V5R0;E7EPA6;A0A7I2V2R2;A0A7I2V5T9;C9J296 LAMB1 Laminin subunit beta-1 yes no 0 0 0 7 0 1 39.288 39.352 3 0.0092035 8986 20230619_1887_Aki_TMTPro18x_K_F7 78.098 65.884 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20651 3015 19321 39159 31403 31403 1 9606 Homo sapiens -0.036006402965540474 PGAIVIDCGINYVPDDK Unmodified 1844.8978 0.8978497 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TKR5;A0A8V8TKS0;A0A8V8TL46;A0A8V8TMA9 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 5 0 1 61.498 61.547 3 0.003033 18565 20230619_1885_Aki_TMTPro18x_K_F5 60.918 50.579 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20652 2973 19322 39160 31404 31404 1 9606 Homo sapiens 0.009196688637985062 PGDGEFVEVISLPK Unmodified 1485.7715 0.7715102 1968 A6NFX8;Q9UKK9;A6NJU6 NUDT5 ADP-sugar pyrophosphatase yes no 0 0 0 4.5 0.5 1 1 62.433 62.459 3 0.038904 19367 20230619_1883_Aki_TMTPro18x_K_F4 46.746 34.191 33139 31028 32910 37885 34522 37071 37734 37832 40341 41185 40226 44432 47628 44247 43809 49151 49707 55277 30668 28451 33504 37685 35805 37573 37947 38694 40969 41544 41638 44949 48225 45901 44971 49641 47540 52417 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 349650000 20653 1968 19323 39161;39162 31405 31405 1 9606 Homo sapiens 0.048055304208446614 PGDLLYFPR Unmodified 1076.5655 0.56548059 1610 A0A6M8YHF9;A0A6M8YDW2;A0A6M8YDW1;Q8IUF8-4;Q8IUF8;Q8IUF8-2;H0Y9L8 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA yes no 0 0 0 1 0 1 60.395 60.395 2 0.00057172 18686 20230619_1880_Aki_TMTPro18x_K_F1 131.06 73.781 32921 22816 32159 30478 27162 34343 33902 34754 58684 41028 32886 50001 60461 56650 31981 103790 74637 81709 30406 20965 32652 30206 28875 34428 34540 35641 57337 41464 36240 50666 59594 60641 35779 102060 71049 77815 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19288000 20654 1610 19324 39163 31406 31406 1 9606 Homo sapiens 0.030260468229016624 PGEGHLDALLR Unmodified 1176.6251 0.62512073 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B3KU93;B7Z1H4;B7Z1V9 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 5 0 1 45.783 45.86 3 0.0020895 12021 20230619_1885_Aki_TMTPro18x_K_F5 80.245 57.173 64027 47010 69472 70202 74075 83141 83401 80170 92728 67087 75894 83921 85780 75208 78912 90159 99184 111170 59208 43240 70204 69140 76822 82984 83823 81771 93186 69064 79158 84165 86959 78674 81546 91492 94785 105330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51609000 20655 2933 19325 39164 31407;31408 31408 2 9606 Homo sapiens 0.0438731776628174 PGFSIADK Unmodified 833.42832 0.42831841 3733 Q5VVC8;Q08ES8;Q5VVD0;P62913-2;P62913 RPL11 60S ribosomal protein L11 yes no 0 0 0 8 0 1 50.396 50.473 3 0.025268 13713 20230619_1888_Aki_TMTPro18x_K_F8 69.954 30.805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20656 3733 19326 39165 31409 31409 1 9606 Homo sapiens 0.004941379433262227 PGGDTIFGK Unmodified 890.44978 0.44978213 1477 A0A384NPU2;P49773;D6REP8;D6RE99;H0YC49;D6RD60;A0A6Q8PGQ8;D6RC06 HINT1 Histidine triad nucleotide-binding protein 1 yes no 0 0 0 6.5 0.5 1 1 50.979 51.057 2 0.002693 14072 20230619_1887_Aki_TMTPro18x_K_F7 104.06 64.055 2061900 1497500 1866100 2003900 2002100 2750600 2309500 2136400 2918500 2502100 2671900 2808800 2663700 2201900 2430400 2959200 2979200 2718200 1903800 1375700 1915700 1990900 2082800 2708800 2328800 2235000 2927500 2519800 2753300 2817100 2708100 2330900 2508600 2946600 2843300 2585300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 765500000 20657 1477 19327 39166;39167 31410 31410 1 9606 Homo sapiens 0.00017522972052574914 PGGGPQGAPAAAGGGGVSHR Unmodified 1656.8081 0.80806391 863 C4P0B2;H0Y7U2;C4P0A9;C4P0C8;C4P0A5;C4P0A0;C4P093;C4P0C4;C4P0B0;Q9NRI5-3;C4P0B1;C4P0A4;C4P094;A0A087WYX6;C4P098;A7E2W8;X5DQV8;C4P0C7;C4P0D1;Q9NRI5;Q9NRI5-2;Q9NRI5-11;Q9NRI5-5;Q9NRI5-10;Q9NRI5-8;C4P0D2;Q9NRI5-7;Q9NRI5-9;Q9NRI5-6;C4P0D0;C4P092;C4P096;C4P0D3;Q9NRI5-4 DISC1 Disrupted in schizophrenia 1 protein yes no 0 0 0 7 0 1 30.657 30.76 3 2.9214E-09 5668 20230619_1887_Aki_TMTPro18x_K_F7 100.77 86.087 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20658 863 19328 39168 31411 31411 1 9606 Homo sapiens 0.005932200901042961 PGHLQEGFGCVVTNR Unmodified 1669.7995 0.79947306 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;Q8NC51-4;Q8NC51-3 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 0 8 0 1 43.81 43.821 3 1.2463000000000001E-33 10942 20230619_1888_Aki_TMTPro18x_K_F8 259.68 216.18 123570 38268 109990 126340 100620 111010 126800 114290 130810 146530 129080 146760 163180 129020 117310 181500 145520 165250 113720 35918 112820 119960 105970 113330 126440 117470 133110 146330 134100 148360 163240 136470 122020 180430 139090 157050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2119499999.9999998 20659 4246 19329 39169 31412;31413 31412 2 9606 Homo sapiens -0.00863469870728295 PGLNVVLEGPK Unmodified 1121.6445 0.64445919 3090 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 0 0 0 8 0 1 56.672 56.729 3 0.0021331 16452 20230619_1888_Aki_TMTPro18x_K_F8 79.82 56.991 52830 39053 44615 57414 61274 81734 60441 60281 88202 53781 51359 58582 72780 58913 56836 76471 63881 73150 48758 35914 46355 56728 62491 80244 61796 62886 86742 54955 55400 59297 72848 61696 58575 76316 61117 69479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95825000 20660 3090 19330 39170 31414 31414 1 9606 Homo sapiens 0.08850274057181196 PGLQTHGFIIR Unmodified 1237.6931 0.69314072 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 0 4 0 1 45.876 45.919 3 1.2758E-06 12146 20230619_1883_Aki_TMTPro18x_K_F4 159.83 105.28 30233 25098 31257 33654 33464 36520 35395 36174 45013 39732 48609 44998 50589 45227 39011 56807 45629 51319 27966 23046 31715 33316 34644 36700 35880 37075 45430 40144 49748 45503 51034 47234 40341 56540 43633 48780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129220000 20661 1532 19331 39171 31415 31415 1 9606 Homo sapiens 0.08380187416946683 PGMVVTFAPVNVTTEVK Oxidation (M) 1803.9441 0.94407161 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;A0A4D5RA52;Q504Z0;Q53HR1;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q6P082;A0A4D5RAB8;A0A4D5RAB6;A0A4D5RA69;Q14222;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 1 0 1.5 0.5 1 1 60.424 60.43 3 1.4263E-07 18776 20230619_1881_Aki_TMTPro18x_K_F2 120.32 99.935 54455 39284 43228 55768 47090 51813 45514 48915 73610 61824 63226 87407 92311 91183 49804 134540 109990 154350 50229 36115 44971 54879 48652 52619 46852 50542 72990 62626 66732 87769 91445 96188 55200 135310 104960 146230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 307720000 20662 1560;3997 19332 39172;39173 31416;31417 31417 1023 2 9606 Homo sapiens 0.0742573376587643 PGMVVTFAPVNVTTEVK Unmodified 1787.9492 0.94915699 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;A0A4D5RA52;Q504Z0;Q53HR1;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q6P082;A0A4D5RAB8;A0A4D5RAB6;A0A4D5RA69;Q14222;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 2 0 1 62.397 62.406 3 1.6686E-13 19706 20230619_1881_Aki_TMTPro18x_K_F2 122.93 104.57 38475 31223 35806 36452 24780 49398 37679 45616 62656 53807 58755 65328 78302 75009 44137 134090 111500 167590 35554 28632 36462 36560 27190 48823 38034 47047 62232 54342 61310 66300 77831 80205 49722 135320 106420 158610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167840000 20663 1560;3997 19332 39174 31418 31418 1 9606 Homo sapiens 0.08670037628507998 PGNQNTQVTEAWNK Unmodified 1585.7485 0.74848335 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2;F8VR77;F8W0A3;H0YIN7 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 6.5 0.5 1 1 46.676 46.762 3 1.3651E-11 12040 20230619_1887_Aki_TMTPro18x_K_F7 170.79 146.41 189070 130300 158920 198880 181070 197880 195130 188580 266860 236010 221510 300900 342050 293860 185400 414000 408440 427030 174420 119920 164520 195060 186880 199900 198070 194660 266100 238100 235020 302350 338170 309680 204850 414050 388760 405380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 534460000 20664 654 19333 39175;39176 31419;31420 31420 2 9606 Homo sapiens -0.020960956438784706 PGPALWPLPLSVK Unmodified 1373.8071 0.80710784 625 A0A024RAJ6 HEXB Beta-hexosaminidase yes yes 0 0 0 6 0 1 64.108 64.154 3 0.0009321 19983 20230619_1886_Aki_TMTPro18x_K_F6 95.401 75.508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20665 625 19334 39177 31421 31421 1 9606 Homo sapiens 0.13515657459151953 PGPGVWDPNWDR Unmodified 1394.6367 0.63674805 1871 A0A994J4Y8;Q96HS1-2;Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 0 0 0 5.5 0.5 1 1 55.944 56.009 2 2.5361E-08 16253 20230619_1885_Aki_TMTPro18x_K_F5 169.76 147.63 67491 46606 58661 62392 57084 68810 64535 65967 76928 83695 79699 79095 89120 69070 71243 94677 81189 88196 62278 42826 60328 61788 59703 69007 65037 68050 77836 83484 82030 80180 89765 72961 73442 94294 77633 83812 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38235000 20666 1871 19335 39178;39179 31422;31423 31422 2 9606 Homo sapiens -0.044784852104157835 PGPTPSGTNVGSSGR Unmodified 1369.6586 0.65860571 3675 P60468;Q53FA5 SEC61B Protein transport protein Sec61 subunit beta yes no 0 0 0 6.5 0.5 1 1 33.728 33.789 2 1.1096999999999999E-32 6792 20230619_1887_Aki_TMTPro18x_K_F7 248.19 212.75 37349 23825 34349 49207 71545 67976 49797 46984 67289 44571 72499 106020 63912 71596 104790 54335 103000 126490 34465 22030 35777 47758 70740 66813 51982 49433 67672 47090 74072 103530 67569 74063 105460 59065 98734 119290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104500000 20667 3675 19336 39180;39181 31424;31425 31425 2 9606 Homo sapiens -0.01143725252495642 PGPYDRPGTAR Unmodified 1185.5891 0.58906958 470 A0A024R7T3;P52597;B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 0 1 6.5 1.12 1 1 1 1 30.256 30.312 3 0.00027605 5903 20230619_1886_Aki_TMTPro18x_K_F6 110.93 83.501 55344 38768 44758 53266 62627 74288 61585 58922 85923 72311 80011 80850 83878 75130 63777 77006 74013 74255 51048 35632 46679 52839 63721 73145 62872 61609 85883 72683 82509 81484 84557 77757 65844 77177 70717 70556 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 217390000 20668 470 19337 39182;39183;39184;39185 31426;31427 31426 2 9606 Homo sapiens 0.0036986058942147793 PGQDIRPIGHDIK Unmodified 1444.7787 0.77866126 2679 B7Z4J7;F5H039;B7Z2B5;Q9NQX3;Q9NQX3-2;B7Z374;B2RDJ7 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 1 7.5 0.5 1 1 40.193 40.22 4 1.9114E-06 9306 20230619_1887_Aki_TMTPro18x_K_F7 124.09 110.13 142420 107590 130520 157760 103590 120940 127170 109730 128360 148280 149780 161320 161250 134040 135910 185250 158080 165940 131540 98926 133330 154620 110430 124800 126940 114070 131650 148150 153240 162260 162990 141840 140150 184110 151090 157790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123150000 20669 2679 19338 39186;39187 31428 31428 1 9606 Homo sapiens 0.07406307811947954 PGQERPGVAR Unmodified 1065.5679 0.56794021 2130 A8K940;Q66K74-2;Q66K74 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 1 6 0.816 1 1 1 26.651 26.724 3 0.058003 4684 20230619_1886_Aki_TMTPro18x_K_F6 48.091 29.113 7737.5 4029.1 7857.6 10629 10668 9694.6 9134 10006 8598 8576.6 12427 14063 10312 9864.6 11985 5474.1 12628 13218 7139.4 3746.8 8027.9 10163 10797 9873.9 9288.6 10168 8938 8905.1 12493 13868 10676 10085 12156 6027.3 12080 12470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13784000 20670 2130 19339 39188;39189;39190 31429 31429 1 9606 Homo sapiens 0.03777895280541088 PGSDTIKPDVQK Unmodified 1283.6721 0.67213051 1476 A0A384NPQ2;Q06830;A0A0A0MRQ5 PRDX1 Peroxiredoxin-1 yes no 0 0 1 6.33 0.471 2 1 43.298 43.385 3 3.5469E-05 10620 20230619_1887_Aki_TMTPro18x_K_F7 120.87 97.552 118150 58729 78141 108910 101950 135470 85603 85551 214140 163560 159490 287500 314780 312280 113190 496780 217080 689570 108670 54286 83254 106020 104160 133700 91139 93021 208740 165210 173550 287310 307220 331140 126710 505570 209960 651180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207580000 20671 1476 19340 39191;39192;39193 31430;31431 31431 2 9606 Homo sapiens 0.04164132526761932 PGSDTIKPNVDDSK Unmodified 1471.7155 0.71545188 3538 V9HW12;P32119 HEL-S-2a;PRDX2 Peroxiredoxin-2 yes no 0 0 1 4.5 0.5 1 1 43.254 43.316 3 0.0004016 10953 20230619_1885_Aki_TMTPro18x_K_F5 92.935 64.608 36417 24278 32104 37082 30253 37092 29641 26715 56694 39146 57564 81656 70068 75515 33446 109950 115960 181720 33602 22347 32970 36365 31654 37251 30756 28395 56181 40260 59661 80814 69598 79945 39655 113640 110600 171600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83950000 20672 3538 19341 39194;39195 31432 31432 1 9606 Homo sapiens -0.0015372248662970378 PGTTDQVPR Unmodified 969.48796 0.48795855 1217 Q6DEN2;A0A140VK07;Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 3.5 0.5 1 1 33.787 33.841 2 0.00071492 7034 20230619_1883_Aki_TMTPro18x_K_F4 141.2 65.342 28403 14190 33481 41476 52898 61351 29110 31763 36355 40991 45877 56631 57570 40985 37672 28620 51041 51488 26238 13229 33919 39800 52800 59790 30986 34747 37074 41420 47179 56152 57382 42202 39338 30276 48710 48659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53680000 20673 1217 19342 39196;39197 31433;31434 31434 2 9606 Homo sapiens 0.0019940888671499124 PGVGLDAINDANLLEACIYR Unmodified 2173.0838 0.08375299 3449 P14324-2;P14324;A0A087WVN4;A0A087X090 FDPS Farnesyl pyrophosphate synthase yes no 0 0 0 7 0 1 63.977 64.007 3 1.1602E-18 19647 20230619_1887_Aki_TMTPro18x_K_F7 169.58 154.81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20674 3449 19343 39198 31435 31435 1 9606 Homo sapiens 0.04413446312491942 PGVWWPDMHR Unmodified 1279.592 0.59204647 1198 J3K000;P12955;A0A8V8TLL9;A0A8V8TLP4;A0A140VJR2;A0A494C165;P12955-2;P12955-3;A0A8V8TLR1;A0A8V8TNF2;A0A8V8TLP2;A0A8V8TLN7 PEPD Xaa-Pro dipeptidase yes no 0 0 0 2 0 1 54.362 54.386 3 0.041475 16330 20230619_1881_Aki_TMTPro18x_K_F2 57.267 48.727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20675 1198 19344 39199 31436 31436 1 9606 Homo sapiens -0.036565875574297024 PHIDNDVK Unmodified 936.46649 0.46649483 3057 Q9P2T1;Q6PKC0;Q9P2T1-3;H0YMB3;Q7Z527;H0YNH0;H0YMG3;H0YMR9;A0A0B4J281;H0YMV5 GMPR2 GMP reductase 2;GMP reductase yes no 0 0 0 3 0 1 36.79 36.845 3 0.014364 8331 20230619_1882_Aki_TMTPro18x_K_F3 65.305 46.994 21341 14504 21867 22105 25366 26934 24588 25585 31271 24656 27701 33075 29605 26432 26791 26434 35356 31672 19717 13349 22222 21755 26050 26830 25045 26204 31319 25235 28708 32948 30041 27479 27759 26862 33720 30040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13070000 20676 3057 19345 39200 31437 31437 1 9606 Homo sapiens -0.004279761419979877 PHIDSVWPFEK Unmodified 1353.6717 0.67173657 178 A0A024R1Z6;Q99536;Q99536-3;B3KUF8;Q99536-2;K7ESA3 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes no 0 0 0 7.5 0.5 1 1 57.855 57.907 3 0.00013815 16960 20230619_1888_Aki_TMTPro18x_K_F8 116.55 101.67 46853 26006 42801 50700 52371 53787 53457 60969 74213 61393 58724 77264 77627 77531 51817 109710 70914 113930 43205 24042 44005 49171 53683 54284 54474 61781 73811 62537 61900 77768 77512 81613 54541 109770 67963 108010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160630000 20677 178 19346 39201;39202 31438 31438 1 9606 Homo sapiens 0.009047575975273503 PHSEAGTAFIQTQQLHAAMADTFLEHMCR Unmodified 3297.5118 0.51177059 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;Q504U3;A0A024R609;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;H3BQZ3;H3BN34;V9HWB8;P14618;A0A8V8TNX9;B4DNK4 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 2 0.816 1 1 1 58.121 58.136 5 2.073E-189 17823 20230619_1881_Aki_TMTPro18x_K_F2 444.59 432.53 33515 10888 24646 29432 19649 20317 24613 24610 34081 33214 31790 45213 57426 45730 25368 73224 40780 78439 30806 10166 25721 28045 20968 21307 24828 25099 34122 33481 33896 45409 56267 48626 27492 73263 39129 74308 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1082600000 20678 370;3451 19347 39203;39204;39205 31439 31439 1 9606 Homo sapiens -0.045084820073043375 PHSPTYNDEGL Unmodified 1228.536 0.53603095 2194 Q7Z3P9;B7Z1C6;B7Z7J8;B7Z314;B1AKV4;F6UTR7;Q3KRB6;Q9NVA1-3;Q9NVA1-5;Q9NVA1-4;Q9NVA1-2;Q9NVA1 DKFZp686O0680;UQCC1;UQCC Ubiquinol-cytochrome-c reductase complex assembly factor 1 yes no 0 0 0 2 0 1 40.937 41.011 2 0.003794 10286 20230619_1881_Aki_TMTPro18x_K_F2 82.75 75.725 35931 26657 26004 31226 32679 26999 29657 35035 41383 39521 45691 43180 46807 43461 34030 56803 62557 55856 33129 24454 27357 31115 33311 27838 30455 35345 41663 39814 46684 43728 47188 45508 36526 56741 59532 53087 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37262000 20679 2194 19348 39206 31440 31440 1 9606 Homo sapiens -0.06909561983911772 PHSVSLNDTETR Unmodified 1354.6477 0.64770667 2148 A8KA83;Q9P0L0;Q9P0L0-2 VAPA Vesicle-associated membrane protein-associated protein A yes no 0 0 0 3.5 0.5 1 1 33.69 33.749 3 2.2084E-24 7069 20230619_1882_Aki_TMTPro18x_K_F3 256.7 209.81 22242 6840.4 18243 25646 22853 24888 24097 22880 37097 32001 34217 47259 35972 32397 27257 38538 37538 40544 20455 6443.5 18979 24291 23438 25142 24611 23776 36928 32324 35390 46727 36268 34212 28501 38709 35837 38477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66187000 20680 2148 19349 39207;39208 31441 31441 1 9606 Homo sapiens -0.015431276267463545 PHSYPALSAEQK Unmodified 1326.6568 0.65681479 26 A0A024QZ64;P09972;B7Z1Y2;B7Z3K7;A8MVZ9;C9J8F3;J3KSV6;J3QKP5;J3QKK1;B7Z1H6 ALDOC Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C yes no 0 0 0 6.5 0.5 1 1 40.181 40.26 3 6.3313E-08 9271 20230619_1887_Aki_TMTPro18x_K_F7 140.14 126.48 80404 50827 72013 75018 73015 80079 87953 80400 95631 92929 95358 93743 103110 80578 90063 99403 95881 92928 74178 46776 73892 73821 76174 80576 88036 82470 96983 93273 98176 94691 104320 84572 92182 99207 91662 88343 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 125500000 20681 26 19350 39209;39210 31442;31443 31443 2 9606 Homo sapiens 0.006552657295515019 PHTVPCK Unmodified 837.41671 0.41670786 3457 P15880;Q6IPX5;Q3KQT6;Q8N5L9;H0YEN5;Q8J014;E9PM36;I3L404;E9PMM9;E9PPT0;Q8NI61 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 yes no 0 0 0 8 0 1 32.959 32.96 3 0.010079 6711 20230619_1888_Aki_TMTPro18x_K_F8 86.866 62.531 32077 14238 30460 31694 44589 40406 28974 41186 52997 31575 34906 56340 53097 57919 31325 40139 78927 106950 29564 13210 31276 30659 44767 40200 30881 41734 51879 33231 37573 56050 52735 58798 34912 44311 75251 100770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14021000 20682 3457 19351 39211 31444 31444 1 9606 Homo sapiens -0.00850382351643475 PIDVQVITHHMQR Unmodified 1572.8195 0.81948022 622 P61158;A0A024RAI1;Q59FV6;B4DXW1;B4DT29;B4DTI0;B4E1U3 ACTR3 Actin-related protein 3 yes no 0 0 0 1.5 0.5 1 1 45.376 45.416 4 4.1343E-06 12274 20230619_1881_Aki_TMTPro18x_K_F2 134.98 113.68 77518 61476 68979 82250 86655 106040 84184 90225 127890 85196 86476 95426 108350 90930 78842 117480 111330 117050 71600 56457 71141 81622 88734 105010 86339 93110 126060 86802 91647 96304 108530 95350 82698 117480 106250 111160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89846000 20683 622 19352 39212;39213 31445 31445 1 9606 Homo sapiens 0.055983258598871544 PIDVQVITHHMQR Oxidation (M) 1588.8144 0.81439484 622 P61158;A0A024RAI1;Q59FV6;B4DXW1;B4DT29;B4DTI0;B4E1U3 ACTR3 Actin-related protein 3 yes no 0 1 0 8 0 1 40.328 40.319 4 0.00010583 9606 20230619_1888_Aki_TMTPro18x_K_F8 110.38 94.992 42933 27908 29890 44975 44051 53068 42728 35416 55840 35736 40667 44885 54123 45111 40148 45719 52640 53519 39549 25708 31759 44055 44693 52609 43516 37453 55488 36452 43043 45160 54159 46570 41788 46357 50251 50747 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77552000 20684 622 19352 39214 31446 31446 359 1 9606 Homo sapiens 0.04354021997255586 PIEVQVGGR Unmodified 953.52943 0.52942943 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 6 0 1 43.715 43.806 2 0.00026764 11144 20230619_1886_Aki_TMTPro18x_K_F6 115.49 86.549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20685 1002 19353 39215 31447 31447 1 9606 Homo sapiens 0.050805896460587974 PIHQGPDAAVTGHIR Unmodified 1567.8219 0.82192306 3646 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 6.5 0.5 1 1 34.661 34.722 4 4.1128E-26 7168 20230619_1887_Aki_TMTPro18x_K_F7 188.63 166.77 67578 36226 77593 74910 91695 81717 81625 84342 92250 77435 105380 120930 97347 94527 84916 77769 114770 122410 62430 33528 78156 72513 93683 82157 83253 85815 93828 79955 107240 119810 99114 97474 88172 80952 109570 115760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 262660000 20686 3646 19354 39216;39217 31448;31449 31449 2 9606 Homo sapiens 0.06072497589229897 PIIFDCR Unmodified 919.45857 0.45857268 2035 Q6FHP5;A8K401;P35232;Q53FV0;C9JW96;E7ESE2;E9PCW0;P35232-2 PHB Prohibitin yes no 0 0 0 7.67 0.471 1 2 51.134 51.211 2 0.0081964 14057 20230619_1888_Aki_TMTPro18x_K_F8 114.19 59.649 211320 171740 184790 212320 186370 237180 212670 220350 287110 235040 225140 267450 325620 284950 238120 397480 328090 451570 195190 157580 190150 211380 194610 237480 215180 226660 285790 237940 238520 270850 325190 299370 249570 400060 313900 427870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210220000 20687 2035 19355 39218;39219;39220 31450;31451;31452 31451 3 9606 Homo sapiens -0.00437826663130636 PIKPMQFLGDEETVR Unmodified 1758.8975 0.89745577 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8;B4DKL5;B4DMJ7;B7Z9E5;B4DJA4 PGAM1;hCG_2015269 Phosphoglycerate mutase;Phosphoglycerate mutase 1 yes no 0 0 1 7 0 1 55.908 55.966 3 1.1711E-07 16161 20230619_1887_Aki_TMTPro18x_K_F7 132.44 95.013 98800 83510 125370 129670 98152 102570 121040 109460 95202 197790 164250 139760 161720 122650 167940 109830 108090 71131 91580 76808 124750 126770 104510 105930 120030 113750 101660 193180 165050 143740 165180 126470 167020 108670 103740 68106 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 606930000 20688 3475 19356 39221 31453 31453 1 9606 Homo sapiens 0.04836293934590685 PIKPMQFLGDEETVRK Unmodified 1886.9924 0.99241879 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8;B4DKL5;B4DMJ7;B7Z9E5;B4DJA4 PGAM1;hCG_2015269 Phosphoglycerate mutase;Phosphoglycerate mutase 1 yes no 0 0 2 1.5 0.5 1 1 53.07 53.086 4 7.2592E-12 15640 20230619_1880_Aki_TMTPro18x_K_F1 168.41 147.35 178840 136990 175430 183570 140130 211550 170870 165780 191440 239580 216230 237270 238480 191580 186690 202630 172210 124890 165280 125820 178070 181860 149650 210580 171230 174530 195130 238040 221750 239170 240070 199620 190030 199150 164590 119620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133740000 20689 3475 19357 39222;39223 31454;31455 31454 2 9606 Homo sapiens 0.08440227405776568 PISTLDNR Unmodified 914.48214 0.48214489 3532 P31689;P31689-2;B7Z5C0;Q9NXZ8 DNAJA1;HDJ2 DnaJ homolog subfamily A member 1 yes no 0 0 0 4.5 0.5 1 1 41.509 41.573 2 0.00098725 10090 20230619_1885_Aki_TMTPro18x_K_F5 151.56 83.347 115900 84569 91844 109490 109340 136720 102290 105710 183900 121180 120780 123070 151430 103550 89638 169950 168770 125650 106910 77664 95676 108820 112360 135430 106000 110540 180060 121880 128130 124300 150600 111010 97030 166990 160410 119970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 460610000 20690 3532 19358 39224;39225 31456 31456 1 9606 Homo sapiens 0.021483103750369992 PIWQRPSK Unmodified 1010.5661 0.56614929 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;A0A7P0TBC2 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 1 5 0.816 1 1 1 42.206 42.279 3 0.0058384 10411 20230619_1886_Aki_TMTPro18x_K_F6 93.267 67.374 484200 333240 408640 462230 454580 662890 492440 500330 791610 480350 461550 486720 513560 405980 476240 616980 546320 329940 446700 306340 422630 458500 471630 650740 503220 521710 775440 487570 491450 491350 520790 432210 489500 600250 520540 317220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1259400000 20691 3452 19359 39226;39227;39228 31457;31458 31458 2 9606 Homo sapiens 0.061288862626156515 PKHEFSVDMTCGGCAEAVSR Unmodified 2236.9664 0.96635675 3208 O00244;Q6IBA3 ATOX1 Copper transport protein ATOX1 yes no 0 0 1 7 0 1 43.472 43.55 4 1.7702E-07 10729 20230619_1887_Aki_TMTPro18x_K_F7 106.73 99.623 28124 20683 31208 30429 34360 35238 34579 32387 34390 42089 38676 38254 34915 28480 38447 25393 30651 28711 26012 19021 31486 29985 35408 35202 34853 33543 35262 41879 39325 38625 35895 29553 38529 25805 29388 27242 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20643000 20692 3208 19360 39229 31459 31459 1 9606 Homo sapiens -0.1026477789027922 PKPGDGEFVEVISLPK Unmodified 1710.9192 0.91923707 1968 A6NFX8;Q9UKK9;A6NJU6 NUDT5 ADP-sugar pyrophosphatase yes no 0 0 1 8 0 1 59.303 59.344 4 0.00065066 17527 20230619_1888_Aki_TMTPro18x_K_F8 87.287 72.411 41694 32247 38610 42983 34266 50204 41711 37430 52483 53450 51329 55492 59416 46323 44530 73464 58072 65565 38517 29616 39454 42598 36258 49891 41955 39568 52833 53238 53081 55952 59664 49527 46455 72849 55484 62330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18062000 20693 1968 19361 39230 31460 31460 1 9606 Homo sapiens 0.09221421954862308 PKPINVR Unmodified 822.50757 0.50757178 3456;2184 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;J7M2B1;E9PNP4;P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;Q05CU6;Q6PKD3;P35241-3 EZR;HEL-S-105;EZR-ROS1;RDX Ezrin;Tyrosine-protein kinase receptor;Radixin no no 0 0 1 4 0.816 1 1 1 36.386 36.45 3 0.029364 8076 20230619_1883_Aki_TMTPro18x_K_F4 74.191 64.162 1227400 885840 1254600 1317400 1757600 1660000 1498800 1352200 1799500 1427900 1548600 1250900 1516900 1082400 1379800 1186800 1562300 1192900 1134300 814820 1279800 1298700 1777000 1645800 1534900 1405000 1805600 1434800 1597100 1272800 1541400 1128800 1414300 1192100 1490500 1134300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1167600000 20694 3456;2184 19362 39231;39232;39233 31461 31461 1 9606 Homo sapiens 0.0892182968814268 PKVEPPKEEQK Unmodified 1307.7085 0.70851601 3544 P34932;B4DH02;V9HW33;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B0AZS1;B0AZT0;B4DN48 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 0 2 6 0 1 38.646 38.729 4 0.0019053 9006 20230619_1886_Aki_TMTPro18x_K_F6 77.185 65.267 67981 37922 67361 75726 85883 85629 72225 71859 73962 92981 98412 81668 84245 59113 75913 50776 71386 48910 62731 35070 68789 73410 87296 85487 73708 74926 76318 92448 99073 82595 85906 61346 76940 51164 68190 46557 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53329000 20695 3544 19363 39234 31462 31462 1 9606 Homo sapiens 0.06697009423464806 PLAEGPQVTGPIEVPAAR Unmodified 1800.9734 0.9733979 3639 Q53FN1;P52943;H0YFA4;P52943-2 CRIP2 Cysteine-rich protein 2 yes no 0 0 0 6 0 1 55.828 55.902 3 1.7778E-24 16373 20230619_1886_Aki_TMTPro18x_K_F6 162.41 150.43 65390 41345 58125 55445 45623 56375 56353 61816 60254 61111 69529 70676 65556 56358 63362 72518 74789 84087 60323 38008 59447 54864 48731 57035 56370 62747 61520 62063 70739 70849 66941 59473 65155 73227 71511 79710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 410660000 20696 3639 19364 39235 31463 31463 1 9606 Homo sapiens 0.10495014106436429 PLAHHIPVEK Unmodified 1139.6451 0.64512789 2116 A8K878;P55145 MANF Mesencephalic astrocyte-derived neurotrophic factor yes no 0 0 0 7.5 0.5 1 1 39.066 39.092 4 0.00047023 9080 20230619_1888_Aki_TMTPro18x_K_F8 96.331 53.085 56469 31091 38747 52861 42862 59788 43844 43709 76057 65742 60727 93434 94975 88144 43596 138450 117360 129460 51973 28686 40990 51614 44438 59504 45125 46382 75073 66168 64667 93440 93562 93684 49836 137500 111660 123010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84495000 20697 2116 19365 39236;39237 31464 31464 1 9606 Homo sapiens 0.08089113496885147 PLCDLLTVMDSK Unmodified 1390.6836 0.68362317 2495;3632 B4DII5;B4DWX3;O60684;Q5BKZ2;P52294;B3KXZ2;B3KWR2 KPNA6;KPNA1 Importin subunit alpha;Importin subunit alpha-7;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed no no 0 0 0 4.5 3.5 1 1 65.576 65.586 3 0.00015467 20763 20230619_1880_Aki_TMTPro18x_K_F1 103.91 81.678 25399 17089 19910 20499 18445 21019 19873 23867 25602 33360 26740 27469 43022 33455 22403 50583 39791 44717 23417 15687 20660 20438 19343 21282 20150 24419 25868 33020 28073 28393 42410 35233 24261 50133 37938 42516 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39155000 20698 2495;3632 19366 39238;39239 31465;31466 31465 2 9606 Homo sapiens 0.003908702342187098 PLDAPAVNK Unmodified 923.50763 0.50763136 1591 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A669KAV7;O95785-4;O95785-3;A0A2R8YFV2;O95785 WIZ Protein Wiz yes no 0 0 0 6 0 1 46.635 46.718 3 0.03771 12503 20230619_1886_Aki_TMTPro18x_K_F6 53.493 29.339 28572 27608 27894 27139 27700 35223 32526 29605 40255 30439 32938 33491 37860 28488 32769 34296 42665 34343 26444 25263 28393 27569 28966 34878 32743 30660 40250 30838 34356 33696 38231 29874 33960 34372 40668 32649 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8533100 20699 1591 19367 39240 31467 31467 1 9606 Homo sapiens 0.04281784897466423 PLDLRPK Unmodified 837.50724 0.50723743 3583 P42766 RPL35 60S ribosomal protein L35 yes yes 0 0 1 2 0 1 44.255 44.338 3 0.066202 11866 20230619_1881_Aki_TMTPro18x_K_F2 57.177 16.909 137690 90897 117450 143810 129660 170000 130700 136840 205920 188820 169930 202470 281050 249170 119740 433770 374290 411640 127010 83707 121360 141090 134160 169030 134020 143460 204230 188660 180880 206970 276090 265190 140400 430590 355920 391080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109160000 20700 3583 19368 39241 31468 31468 1 9606 Homo sapiens 0.08198409968269971 PLDREQIAR Unmodified 1096.5989 0.59890598 704 C9J126;A0A024RC42;P19022-2;P19022;C9JMH2;A0A6Q8PF58;C9J8J8 CDH2 Cadherin-2 yes no 0 0 1 5 0 1 35.136 35.226 3 0.00070198 7678 20230619_1885_Aki_TMTPro18x_K_F5 112.11 79.265 34960 24452 38060 39335 38837 35078 32240 38979 55156 45737 42372 51369 60450 44715 31976 77426 67446 53700 32321 22517 38404 38434 40080 35889 33622 39724 54397 46051 44880 51707 59775 48058 35220 75808 64094 51307 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35553000 20701 704 19369 39242 31469 31469 1 9606 Homo sapiens 0.05447048594805892 PLDSQSIYQLIEISR Unmodified 1760.9309 0.93086439 3446 P13521;B4DQJ6 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 8 0 1 64.222 64.243 3 1.1046E-07 19649 20230619_1888_Aki_TMTPro18x_K_F8 128.74 110.01 16735 17652 18052 18083 17252 15054 19758 17071 17866 18878 21049 18709 22220 18885 23653 17850 18550 20327 15512 16154 18212 18202 18004 15522 19721 17363 18440 18975 21492 19010 22698 19426 23713 18115 17810 19274 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125590000 20702 3446 19370 39243 31470 31470 1 9606 Homo sapiens 0.08083618978184859 PLEGRPER Unmodified 952.50903 0.50902834 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 1 3.5 0.5 1 1 29.881 29.961 3 0.0032929 5587 20230619_1883_Aki_TMTPro18x_K_F4 93.429 51.141 145100 124050 127820 150040 160500 171540 157850 154450 248580 168840 187720 200310 202700 189900 134780 179190 228110 209630 134080 113770 131900 149650 164230 171470 162010 159390 245420 171060 196070 201500 203410 195610 143630 181840 217220 198850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 66528000 20703 1005 19371 39244;39245 31471;31472 31472 2 9606 Homo sapiens 0.030874189862288404 PLELELCPGR Unmodified 1182.6067 0.60669348 4582 Q9NR45;V9HW39 NANS;HEL-S-100 Sialic acid synthase yes no 0 0 0 5 0.816 1 1 1 56.099 56.148 2 0.00033418 16297 20230619_1885_Aki_TMTPro18x_K_F5 151.44 124.33 211950 164050 193090 215170 209760 218880 206760 209250 248870 205830 194060 214850 223170 222030 210120 260100 225720 257790 195780 150640 198070 213100 216480 220850 209960 214390 248960 208610 203140 217990 226500 230660 215050 260500 216040 244750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 348600000 20704 4582 19372 39246;39247;39248 31473 31473 1 9606 Homo sapiens 0.022694398000567162 PLENLEEEGLPK Unmodified 1366.698 0.6980109 3908 Q15008;Q15008-4;C9J7B7 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 2.5 0.5 1 1 59.522 59.543 3 2.4667E-07 18246 20230619_1882_Aki_TMTPro18x_K_F3 160.86 135.79 83222 62558 69558 80776 72562 84055 73872 70257 88587 98286 85420 86107 99044 85824 86111 117780 89437 101900 76810 57441 71904 80091 75258 84427 74869 73497 89394 97475 88388 87984 100050 90213 88158 116860 85627 96907 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112680000 20705 3908 19373 39249;39250 31474;31475 31475 2 9606 Homo sapiens 0.02932981978369753 PLEPVSTVQVEPAVK Unmodified 1591.8821 0.88212328 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DM27 PRRC2C Protein PRRC2C yes no 0 0 0 6 0 1 55.805 55.879 3 0.00025149 16391 20230619_1886_Aki_TMTPro18x_K_F6 101.36 86.091 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20706 2894 19374 39251 31476 31476 1 9606 Homo sapiens 0.109857504090769 PLFATNPFDQDVEK Unmodified 1619.7831 0.78313752 2290 B2RAY1;Q92783-2;Q92783;C9J1E5 STAM Signal transducing adapter molecule 1 yes no 0 0 0 6 0 1 62.495 62.546 3 0.0090108 19288 20230619_1886_Aki_TMTPro18x_K_F6 66.533 43.73 39007 30841 60925 49250 46442 49261 50689 48351 48799 58069 40650 54090 43708 56097 51894 76425 63696 65090 36229 28383 59771 48231 49408 49779 50845 49729 49587 58035 42351 55144 45063 58773 53416 75764 60839 61938 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196130000 20707 2290 19375 39252 31477 31477 1 9606 Homo sapiens -0.001962725558087186 PLFGPGYTGIR Unmodified 1176.6291 0.62914348 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 4.5 0.5 1 1 55.259 55.297 2 0.0081418 15992 20230619_1885_Aki_TMTPro18x_K_F5 78.192 51.23 100630 61769 95204 103460 79006 94418 91143 89664 110100 155080 148210 182620 190550 164010 122460 221030 196080 235010 92860 56946 96966 100880 83769 95999 91851 93721 112850 153990 152270 183460 189980 172810 130340 221650 187170 222920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58119000 20708 1213 19376 39253;39254 31478 31478 1 9606 Homo sapiens 0.04789407259977452 PLFLEFPK Unmodified 989.5586 0.5586043 532 A0A024R8Q1;P10253 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase yes no 0 0 0 2 0 1 63.306 63.315 3 0.078206 20104 20230619_1881_Aki_TMTPro18x_K_F2 53.472 44.609 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20709 532 19377 39255 31479 31479 1 9606 Homo sapiens 0.0634073394232928 PLFPHVLCHNCAVEFNFGQK Unmodified 2413.146 0.14597609 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 3.5 0.5 1 1 58.368 58.384 4 8.6523E-16 17756 20230619_1882_Aki_TMTPro18x_K_F3 147.7 126.3 119580 92210 106000 117500 95961 114760 106480 108280 123660 103520 103290 97319 113870 95329 102690 133150 107090 104120 110430 84648 108730 116530 100880 116080 107310 110970 124160 104740 107360 99120 115350 100370 105030 131490 102400 99213 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2775300000 20710 3776 19378 39256;39257 31480;31481 31480 2 9606 Homo sapiens -0.0040710582015890395 PLFSSASPQDSSPR Unmodified 1474.7052 0.70522155 946 U3KQE8;A0A0A0MRX8;A0A1B0GU97;Q5VW28;A0A1B0GW37;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;A0A2R8Y7V8;O00712-4;O00712-5;A0A1B0GWJ4;A0A1B0GVN4;B4DS74;A0A1B0GWB8;Q5VW31;O00712-6 NFIB Nuclear factor 1;Nuclear factor 1 B-type yes no 0 0 0 7 0 1 46.867 46.955 2 4.3114999999999996E-19 12168 20230619_1887_Aki_TMTPro18x_K_F7 189.13 144.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20711 946 19379 39258 31482 31482 1 9606 Homo sapiens -0.013142854211992017 PLGAAEPITVK Unmodified 1094.6336 0.63356015 3893 Q96J71;Q14576;Q14576-2 ELAVL3 ELAV-like protein;ELAV-like protein 3 yes no 0 0 0 7 0 1 52.768 52.838 2 2.006E-08 14852 20230619_1887_Aki_TMTPro18x_K_F7 172.59 117.06 67118 51717 59611 73560 48133 61585 51236 55549 62257 81323 78745 100040 92953 90728 61260 115910 103700 120900 61982 47533 61085 72293 51095 63019 51884 57894 63565 81352 80739 100370 93034 95167 65504 116180 98931 114720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40025000 20712 3893 19380 39259 31483 31483 1 9606 Homo sapiens 0.09002871682878322 PLGELWK Unmodified 841.46979 0.46978929 3498 Q6FGU2;P23919;Q53F55;P23919-2;H7C312 DTYMK Thymidylate kinase yes no 0 0 0 4.5 3.5 1 1 60.375 60.375 2 0.0079671 18598 20230619_1880_Aki_TMTPro18x_K_F1 121.29 69.604 86961 68921 80091 84424 62081 94593 74970 74579 98338 111690 102160 108770 121370 99486 76284 118140 102460 105400 80342 63236 81708 84106 66523 94368 75606 78573 99109 110810 105450 110190 121110 103920 80042 117590 97805 100230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106320000 20713 3498 19381 39260;39261 31484;31485 31484 2 9606 Homo sapiens 0.04271318702660665 PLHLHIIPTEPFPTTR Unmodified 1868.0309 0.030853203 582 B0AZM4;A8K6F0;A0A024R9L1;O60306 AQR Intron-binding protein aquarius yes no 0 0 0 3 0 1 52.967 53.026 4 3.1992E-11 15501 20230619_1882_Aki_TMTPro18x_K_F3 161.76 146 15523 12466 15062 16385 16756 18813 18043 17527 22390 20758 19556 21190 18655 16139 22262 17799 18764 19255 14348 11446 15374 16253 17314 18808 18248 18081 22452 20821 20178 21303 19238 16903 22356 17958 17990 18271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198370000 20714 582 19382 39262 31486 31486 1 9606 Homo sapiens 0.13155901102618373 PLISVYSEK Unmodified 1034.5648 0.56481189 3558 Q59GY2;P36578;B4DMJ6;Q53G74;B4DFI6;H3BTP7;H3BU31;B4DP82 RPL4 60S ribosomal protein L4 yes no 0 0 0 4.5 3.5 1 1 55.178 55.212 3 2.7369E-06 15687 20230619_1888_Aki_TMTPro18x_K_F8 155.07 120.81 512050 417230 513400 500510 478060 599340 533880 490920 556940 541540 400570 411980 552850 383070 438360 619810 554330 523720 473480 382700 520880 499960 501370 595940 535770 510420 560390 540790 425100 423310 553610 409030 455150 613050 529040 498560 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 527820000 20715 3558 19383 39263;39264 31487;31488;31489 31489 3 9606 Homo sapiens 0.04891207383184337 PLLFMDLLDER Unmodified 1360.7061 0.70607317 4317 Q969X6;H3BSH7;Q969X6-2;A0A0J9YWM9;A0A0J9YXV4 CIRH1A Cirhin yes no 0 0 0 6 0 1 66.488 66.531 2 0.0032981 20948 20230619_1886_Aki_TMTPro18x_K_F6 96.342 63.221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20716 4317 19384 39265 31490 31490 1 9606 Homo sapiens 0.040148376941488095 PLLLHTGMGR Oxidation (M) 1109.6015 0.60154852 267 Q658J0;A0A024R3V5;A0A024R3V7;Q9GZT8-2;Q9GZT8 DKFZp762L015;NIF3L1 NIF3-like protein 1 yes no 0 1 0 4 0 1 40.285 40.327 3 0.029437 9695 20230619_1883_Aki_TMTPro18x_K_F4 50.452 25.015 110890 66590 122160 129430 166130 131460 137920 157380 121710 115410 161180 148650 124310 121010 148680 110870 134900 122890 102450 61531 123790 125500 167810 133390 140310 157830 126430 119810 161880 148520 129250 125110 149790 112410 129120 116640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28784000 20717 267 19385 39266 31491 31491 158 1 9606 Homo sapiens 0.05113180728108091 PLMGVIYVPLTDK Unmodified 1444.8 0.79997356 1398 B7Z972;A0A384MDK7;A0A3F2YNX8;P22061;P22061-2;F6S8N6 PCMT1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 4 0 1 64.151 64.159 3 0.092542 20012 20230619_1883_Aki_TMTPro18x_K_F4 35.737 20.471 7491.9 5845.3 8133.9 7259.8 7332.1 6573.7 6415.6 6764.3 8539.1 7656.6 8469.6 7973.3 9799.3 9548.7 7120.2 11255 11907 12033 6930.5 5364.2 8187.8 7210.1 7645.1 6709.3 6594.4 6922.5 8576.4 7705.2 8744.2 8143.6 9846 9884.6 7574.3 11313 11348 11420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6704900 20718 1398 19386 39267 31492 31492 1 9606 Homo sapiens 0.09536556796410878 PLMTELLK Unmodified 943.54124 0.54123967 629;445 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;Q92973-3;A0A7P0T944;A0A7P0T9C0;K7ELC3;B4DRY5;A0A024R7F7;O14787-2;Q4LE60;O14787;A0A075B780;Q05D48;B3KPC8 TNPO1;TNPO2;TNPO2 variant protein Transportin-1;Transportin-2 no no 0 0 0 1 0 1 61.977 61.977 2 0.0010002 19259 20230619_1880_Aki_TMTPro18x_K_F1 151.27 92.064 63959 42792 61276 67593 62273 105200 67207 59607 109750 96555 83862 113520 124920 116180 65248 166100 159190 191900 59053 39404 62567 66625 65122 102350 68749 65050 108400 96248 89168 114580 123560 122400 73150 167200 151630 181880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 260630000 20719 629;445 19387 39268 31493 31493 1 9606 Homo sapiens 0.06721070345020053 PLPEVTDEYK Unmodified 1189.5867 0.58666954 2662 B5BUB5;P05455;E7ERC4;E9PGX9;E9PFL9;Q9UMH7 SSB Lupus La protein yes no 0 0 0 3.33 0.471 2 1 52.981 53.02 3 3.1507E-05 15377 20230619_1883_Aki_TMTPro18x_K_F4 142.43 122 58007 41165 49877 57067 68911 82378 59980 70357 94006 61059 74966 89428 88474 86865 60049 149570 128440 154410 53531 37837 51678 56623 69974 81061 62042 72424 92983 63161 78451 89584 88710 92938 65846 149240 122400 146510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174070000 20720 2662 19388 39269;39270;39271 31494;31495 31495 2 9606 Homo sapiens -0.0005403265890890907 PLPMEQFQVIQSFLR Unmodified 1831.9655 0.96547575 48 A0A8V8TL27;A0A8V8TL18;A0A8V8TLG1;A0A8V8TL47;A0A024QZM5;A0A8V8TMP9;Q9ULE6 KIAA1274;PALD1 Paladin yes no 0 0 0 5 0 1 66.041 66.084 3 1.3343E-07 20604 20230619_1885_Aki_TMTPro18x_K_F5 125.22 104.41 6834 4024.7 8403.2 8606.2 4572.8 6101.2 7392.4 8524.3 9004.4 8547.6 11096 8583.7 8660 6857.5 6687.3 12045 8714.7 10689 6320.1 3725.1 8350.4 8277.6 5134.2 6404.6 7349.9 8541.8 9153.8 8634.5 11157 8673.8 8819.1 7405.3 6978.4 11926 8332.3 10159 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10670000 20721 48 19389 39272 31496 31496 1 9606 Homo sapiens 0.08277163585285052 PLPVPPELAPFVGR Unmodified 1487.85 0.85003529 2379 B4DWA1;B4DMV0;B3KPV9;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-6;Q9UQB8-2;Q9UQB8;I3L0Y9;I3L2M4;B4DQ43 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 3 0 1 64.097 64.127 2 0.063616 20176 20230619_1882_Aki_TMTPro18x_K_F3 73.067 38.989 33731 29954 36303 43811 28727 29756 28574 35948 37925 38806 38209 41998 44676 38239 34320 42494 37492 47702 31227 27525 36583 42906 30430 31296 29155 36382 38140 39152 39485 42351 44899 39801 35305 42901 35913 45215 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17652000 20722 2379 19390 39273 31497 31497 1 9606 Homo sapiens 0.12562427516559183 PLQIENIIDQEVQTLSGGELQR Unmodified 2479.2918 0.29183151 3692 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 5 0 1 67.161 67.204 3 4.5753E-12 21092 20230619_1885_Aki_TMTPro18x_K_F5 123.99 107.5 2174.2 1551.8 2404.5 2719 1977.7 2141.2 1901 1316.7 2584.1 2829.9 2285.8 1220.2 2790.2 3525.1 2162.5 3137.1 3295.7 2371.5 2010.6 1430.5 2418.1 2639.4 2086.4 2189.6 1942.4 1445.6 2585.3 2734.7 2373.5 1394.2 2811.3 3535.2 2277.5 3113.9 3136 2263.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8836500 20723 3692 19391 39274 31498 31498 1 9606 Homo sapiens 0.11135726710563176 PLSHQPGPEAPALPK Unmodified 1537.8253 0.8252771 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;A0A140T954 VARS Valine--tRNA ligase yes no 0 0 0 8 0 1 45.928 45.966 3 4.783E-14 11820 20230619_1888_Aki_TMTPro18x_K_F8 178.23 152.19 63345 39111 54747 64802 56417 68758 55832 57590 77047 83182 76678 82889 97236 79496 72619 98599 79029 88958 58417 36051 56414 63324 58568 68927 57001 60295 77356 82704 79601 84034 97393 83127 74779 98164 75621 84558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230630000 20724 725 19392 39275 31499 31499 1 9606 Homo sapiens 0.07787747643237708 PLSSGGEEEEKPR Unmodified 1413.6736 0.67358707 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24;E2PSM9 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 1 2 0 1 37.741 37.804 3 5.8976E-11 8790 20230619_1881_Aki_TMTPro18x_K_F2 182.37 176.88 96215 50427 70090 87801 88926 120860 88661 95080 178290 128020 128100 180690 183970 167630 86544 185200 214390 216660 88568 46554 73790 85922 91314 118990 92106 99781 174470 129410 136420 180470 181600 174230 97307 187280 203910 205450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132410000 20725 2414 19393 39276 31500 31500 1 9606 Homo sapiens -0.01670278175151907 PLSSLTPLIMAAK Unmodified 1340.7738 0.77375881 3839 Q13177;A8K5M4;Q9Y6B5;H7C1X3 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase yes no 0 0 0 6 0 1 64.371 64.417 3 7.5694E-08 20034 20230619_1886_Aki_TMTPro18x_K_F6 151.1 119.91 53267 41190 54100 59058 49918 64738 61480 54766 59218 59902 58675 56916 56426 57213 56816 60871 61376 61345 49244 37861 54871 58219 52544 64763 61247 56805 60445 60188 60133 57928 57745 59164 58042 61135 58679 58261 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146760000 20726 3839 19394 39277 31501 31501 1 9606 Homo sapiens 0.11700287624967132 PLVHLEK Unmodified 834.49634 0.49633839 2504 B4DJL3;Q9BUE0 MED18 Mediator of RNA polymerase II transcription subunit 18 yes no 0 0 0 8 0 1 44.733 44.761 3 0.0065203 11388 20230619_1888_Aki_TMTPro18x_K_F8 101.64 57.196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20727 2504 19395 39278 31502 31502 1 9606 Homo sapiens 0.07247007593991839 PLVIQAMPTLIELMK Unmodified 1695.9667 0.96672131 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9;J3QKQ5 KPNB1 Importin subunit beta-1 yes no 0 0 0 5.67 0.471 1 2 67.113 67.156 3 6.1398E-14 20978 20230619_1885_Aki_TMTPro18x_K_F5 173.68 156.31 10211 4612.9 8757.1 9914.5 7971.8 21688 9637.6 9710.2 19448 16664 14925 31504 38266 35873 12838 45978 41908 77467 9404.3 4276.6 9028 9705.7 8515.7 20716 9918 10934 19096 16957 16626 31451 37167 37428 15300 47671 40063 73115 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65365000 20728 3904 19396 39279;39280;39281 31503;31504 31503 2 9606 Homo sapiens 0.14657661629848917 PLYFADR Unmodified 880.4443 0.44430282 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YL33;H0YM50;B3KRQ1 ANXA2;HEL-S-270 Annexin A2;Annexin yes no 0 0 0 7.5 0.5 1 1 50.625 50.704 2 0.0092624 13821 20230619_1888_Aki_TMTPro18x_K_F8 119.56 79.289 195430 119180 154940 172200 176860 263730 157010 164100 351380 185070 185730 265870 353650 329820 179560 493610 449780 632850 180110 109680 161250 170570 182540 257200 165320 175090 340010 189040 205970 268830 348000 346870 202360 499990 429000 598940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 502220000 20729 368 19397 39282;39283 31505 31505 1 9606 Homo sapiens -0.0007015581976475005 PLYSVTVK Unmodified 905.52222 0.52221879 1976 A6NJA2;B2RD79;P54578-2;P54578-3;P54578;B3KTG4 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 3 0 1 52.443 52.502 3 0.034304 15292 20230619_1882_Aki_TMTPro18x_K_F3 60.91 26.832 57653 49280 60300 58074 68814 62895 67684 65570 71333 63957 71412 71391 72235 53899 76381 76991 72257 66734 53345 45185 61134 58017 70654 63339 68431 66766 72454 64943 73325 71576 73837 57405 77370 76426 69137 63513 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76202000 20730 1976 19398 39284 31506 31506 1 9606 Homo sapiens 0.06567857045627079 PLYVALAQR Unmodified 1029.5971 0.59711507 566;1667 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;A0A024R9E2;Q3ZCS4;Q9H361;Q5VX58;Q2VIP3;Q4VXU2;A0A6Q8JFT6;H0YB86;A0A6I8PLA1;A0A6I8PS38;Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;H0Y5F5;H0YEU6;Q59GZ7;Q53GL4;A0A7I2V4V6;Q3B867;Q147Y3 PABPC1;PABPC3;PABPC1L;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 4 no no 0 0 0 5 0 1 54.75 54.817 2 0.0032867 15768 20230619_1885_Aki_TMTPro18x_K_F5 98.503 85.049 95197 88846 79686 82252 127550 249640 114100 107160 295990 41922 33796 39979 46301 38107 46830 54086 44062 45331 87985 81272 83123 85698 129660 236160 121100 117480 279950 46548 47538 40678 47019 40210 47498 53583 42194 43144 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98793000 20731 566;1667 19399 39285 31507 31507 1 9606 Homo sapiens 0.08350039576839663 PMCIPPSYADLGK Unmodified 1447.684 0.68395752 62 A0A0A0MR02;A0A024QZT0;P45880;Q5JSD2;Q5JSD1 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 3.67 3.09 1 1 1 58.179 58.199 3 9.1164E-05 17783 20230619_1880_Aki_TMTPro18x_K_F1 81.565 67.819 233320 202480 244540 265250 214960 284470 263820 273120 321280 272310 264700 274810 314940 249060 254900 324550 284900 280040 215910 185840 247230 262930 227340 285780 264990 279780 321710 275430 276470 278090 316900 261770 262300 322250 272260 266470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 147680000 20732 62 19400 39286;39287;39288 31508;31509;31510 31508 3 9606 Homo sapiens -0.021977100459480425 PMCIPPSYADLGK Oxidation (M) 1463.6789 0.67887214 62 A0A0A0MR02;A0A024QZT0;P45880;Q5JSD2;Q5JSD1 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 1 0 8 0 1 52.989 53.064 3 0.049154 14827 20230619_1888_Aki_TMTPro18x_K_F8 41.825 34.233 448340 338490 389330 395540 427390 539960 449660 421930 585280 264450 255210 201810 241940 183560 335510 262290 245840 144090 413910 310490 401100 396650 442440 532150 455980 435020 574400 274560 276650 207490 251720 194070 334140 256000 235380 138480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85629000 20733 62 19400 39289 31511 31511 31 1 9606 Homo sapiens -0.03442013908579611 PMCVESFSDYPPLGR Oxidation (M) 1769.7753 0.77529172 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;B4DNE0;Q8IUB0;A0A4D5RA52;Q504Z0;Q53HR1;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q6P082;A0A4D5RBD4;A0A4D5RBH1;A0A4D5RAB6;Q14222;A0A4D5RBL9;Q2F837;Q96EB3;A0A4D5RBE6;A0A4D5RA59;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 1 0 6.2 0.748 1 2 2 55.49 55.559 2;3 1.6804E-10 16159 20230619_1886_Aki_TMTPro18x_K_F6 162.26 153.31 44389 42913 47446 47343 42298 48463 42013 47419 56707 57519 52152 55358 66689 61825 56069 92461 71458 86202 41115 39307 47858 47485 44368 48912 42868 48772 56803 57542 54375 56586 67160 65156 58260 91946 68324 81887 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 605670000 20734 1560;3997 19401 39290;39291;39292;39293;39294 31512;31513;31514 31513 1024 3 9606 Homo sapiens -0.07880491139258083 PMCVESFSDYPPLGR Unmodified 1753.7804 0.7803771 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;B4DNE0;Q8IUB0;A0A4D5RA52;Q504Z0;Q53HR1;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q6P082;A0A4D5RBD4;A0A4D5RBH1;A0A4D5RAB6;Q14222;A0A4D5RBL9;Q2F837;Q96EB3;A0A4D5RBE6;A0A4D5RA59;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 6.5 0.5 1 1 60.489 60.54 3 8.8678E-34 17909 20230619_1887_Aki_TMTPro18x_K_F7 203.29 191.52 45338 32653 41544 44172 36549 52126 47766 44694 56762 52691 51532 58681 66697 62588 50147 88333 72678 89007 41862 30003 42476 43753 38772 51897 47783 46398 57114 53040 53818 59486 66878 65768 52746 88258 69433 84472 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 327770000 20735 1560;3997 19401 39295;39296 31515;31516 31516 2 9606 Homo sapiens -0.06636187276626515 PMCVESFSQYPPLGR Unmodified 1766.812 0.81201158 1378 Q05639;A0A2U3TZH3 EEF1A2 Elongation factor 1-alpha 2 yes no 0 0 0 1.5 0.5 1 1 59.419 59.425 3 3.511E-25 18399 20230619_1881_Aki_TMTPro18x_K_F2 178.84 168.18 38265 31733 37064 39072 35038 40081 40687 38313 47979 38580 38000 38731 41393 36020 43243 49601 46478 49883 35376 29112 37734 38872 36727 40412 40916 39284 48046 39004 39624 39245 42244 37963 44156 49619 44462 47364 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44433000 20736 1378 19402 39297;39298 31517 31517 1 9606 Homo sapiens -0.04072194522677819 PMEINPEMLNK Oxidation (M) 1330.6261 0.62610829 3423 V9HW74;P09936;D6RE83;B2RD14;D6R956;D6R974;D6RF53 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 1 0 5.5 0.5 1 1 52.661 52.736 3 4.0967E-05 14911 20230619_1885_Aki_TMTPro18x_K_F5 130.23 102.26 161120 156390 159810 206540 173560 220730 164170 155980 251410 222610 206960 321530 336790 298270 202520 515660 387880 497000 149150 143500 162950 204480 179340 220570 168730 165770 249560 224620 220730 321340 333610 319770 220310 512550 370080 471850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 436250000 20737 3423 19403 39299;39300 31518;31519 31518 2044;2045 2 9606 Homo sapiens -0.025979719713404847 PMEINPEMLNK Unmodified 1314.6312 0.63119367 3423 V9HW74;P09936;D6RE83;B2RD14;D6R956;D6R974;D6RF53 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 0 0 6.5 1.12 1 1 1 1 58.184 58.24 3 2.2204E-12 17364 20230619_1886_Aki_TMTPro18x_K_F6 199.33 173.39 242980 165450 195570 242010 150510 256620 187620 191330 314130 292260 238630 415530 471730 461270 227600 695660 521630 734760 224080 152190 202290 238090 162010 256590 190930 202810 310150 294030 259490 417980 463320 486420 254630 695850 497720 696680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1111600000 20738 3423 19403 39301;39302;39303;39304 31520;31521 31520 2 9606 Homo sapiens -0.013536681087089164 PMFIVNTNVPR Acetyl (Protein N-term) 1328.6911 0.69109181 3115 I4AY87;P14174 MIF Macrophage migration inhibitory factor yes no 1 0 0 2 0 1 64.983 64.99 2 8.7731E-17 20808 20230619_1881_Aki_TMTPro18x_K_F2 161.92 147.14 8383.7 7329.7 6389.5 5764.4 8802.2 10339 8724.6 10281 10709 10534 10386 8140.2 9743.2 7590.3 10697 10068 10925 12080 7740.3 6698.7 6690.5 6020.5 8963 10110 8863.8 10499 10787 10559 10631 8362.6 10005 7989.2 10870 10190 10458 11448 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9131000 20739 3115 19404 39305 31522 31522 1 9606 Homo sapiens 0.03989390616811761 PMFIVNTNVPR Acetyl (Protein N-term);Oxidation (M) 1344.686 0.68600643 3115 I4AY87;P14174 MIF Macrophage migration inhibitory factor yes no 1 1 0 3 0.816 1 1 1 66.262 66.28 2 9.9071E-24 21046 20230619_1882_Aki_TMTPro18x_K_F3 190.51 154.12 8360.6 9991 15868 11762 13917 13831 15059 19151 11440 12370 14659 12471 11249 10350 17394 14590 16377 13892 7810.5 9151.4 15440 11778 14595 13952 15030 18996 11987 12850 14740 12605 11886 10966 17507 14563 15662 13211 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 143110000 20740 3115 19404 39306;39307;39308 31523;31524;31525 31524 1811 3 9606 Homo sapiens 0.027450867541801927 PMFIVNTNVPR Oxidation (M) 1302.6754 0.67544174 3115 I4AY87;P14174 MIF Macrophage migration inhibitory factor yes no 0 1 0 4 0.816 1 1 1 50.972 51.023 2;3 0.00010389 14463 20230619_1883_Aki_TMTPro18x_K_F4 134.77 114.25 161220 117350 143710 180830 150210 164390 152600 138980 289260 195040 190740 202890 180160 186140 197970 195880 184210 187090 148830 107990 147750 177030 155900 166860 157820 145370 282720 194660 199940 204930 185310 192900 200230 196250 176410 177780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 483450000 20741 3115 19404 39309;39310;39311 31526;31527;31528 31527 1811 3 9606 Homo sapiens 0.03621104099738659 PMFIVNTNVPR Unmodified 1286.6805 0.68052712 3115 I4AY87;P14174 MIF Macrophage migration inhibitory factor yes no 0 0 0 4.5 0.5 1 1 56.125 56.16 2 1.405E-08 16678 20230619_1883_Aki_TMTPro18x_K_F4 179.1 159.62 336710 261040 372150 387190 286050 415750 343870 336280 685650 497480 424490 475860 465570 443730 442860 508540 479360 487760 311510 240030 373980 380820 306900 416060 353760 353420 668290 494160 449850 482630 473290 461990 453110 508690 458360 463470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1011899999.9999999 20742 3115 19404 39312;39313 31529 31529 1 9606 Homo sapiens 0.04865407962370227 PMFVSPCVDK Unmodified 1178.5464 0.54640141 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DYA2;H0YHU8 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 0 4.5 3.5 1 1 54.955 54.988 2;3 0.0026153 16444 20230619_1880_Aki_TMTPro18x_K_F1 68.893 42.774 81301 72003 82574 88157 73059 89881 88292 85985 88484 105320 91795 84524 97408 79627 92859 103060 92077 87720 75225 66037 83679 87729 77097 90655 88175 88632 90373 104740 94240 86599 98991 83552 94519 102310 88076 83496 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35648000 20743 1555 19405 39314;39315 31530;31531 31530 2 9606 Homo sapiens -0.035729938546865014 PMIHELLTEGR Oxidation (M) 1310.6653 0.66527099 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 1 0 5 0 1 45.837 45.914 3 0.00027985 11923 20230619_1885_Aki_TMTPro18x_K_F5 97.163 84.78 51842 46512 52486 57245 60607 65843 61655 57528 79114 48957 54251 47214 56267 43099 56727 56074 56210 56480 47971 42658 53416 57034 62354 65741 62614 59135 78520 49958 56880 47926 57362 45308 57644 56165 53788 53640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83500000 20744 3904 19406 39316 31532 31532 2580 1 9606 Homo sapiens 0.02236496374507624 PMIHELLTEGR Unmodified 1294.6704 0.67035637 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 0 0 6.5 0.5 1 1 52.085 52.16 3 0.00029356 14669 20230619_1886_Aki_TMTPro18x_K_F6 103.21 84.674 130880 125220 136940 134810 126130 152970 130190 122550 206160 135770 127670 144030 166140 130370 138490 177220 168300 173500 121200 114680 138430 135640 132220 152630 133340 127710 202440 136970 136440 145400 167030 137450 143170 177000 160780 164810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 339380000 20745 3904 19406 39317;39318 31533;31534 31533 2 9606 Homo sapiens 0.03480800237116455 PMNIQLVTSQIDAQR Unmodified 1712.888 0.88795372 4189 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 0 0 1.5 0.5 1 1 59.829 59.835 3 1.3925999999999998E-19 18520 20230619_1881_Aki_TMTPro18x_K_F2 215.87 202.46 40780 33816 36453 42997 39993 47647 41220 38601 51161 46077 45324 43854 51993 43798 40570 59118 50762 50687 37679 31034 37486 42710 41348 47612 41790 40274 51329 46130 47047 44653 52321 45983 42121 58634 48469 48232 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 267820000 20746 4189 19407 39319;39320 31535;31536 31536 2 9606 Homo sapiens 0.06002525649114432 PMQFLGDEETVR Unmodified 1420.6657 0.66566492 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8;B4DKL5;B4DMJ7;B7Z9E5;B4DJA4;P15259;A4D2J6 PGAM1;hCG_2015269;PGAM2 Phosphoglycerate mutase;Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 0 0 0 2.5 0.5 1 1 56.636 56.663 2 1.8083E-09 16995 20230619_1882_Aki_TMTPro18x_K_F3 183.99 132.89 43405 33824 37861 44644 28223 49172 39613 41524 62924 55047 44798 73317 82470 68791 44743 100940 76117 106800 40081 31060 38839 44235 30588 49152 39995 43322 62093 55504 48612 73429 81221 72813 48214 101060 72737 101270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77015000 20747 3475 19408 39321;39322 31537 31537 1 9606 Homo sapiens -0.027841286962939193 PMQFLGDEETVRK Oxidation (M) 1564.7555 0.75554256 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8;B4DKL5;B4DMJ7;B7Z9E5;B4DJA4;P15259;A4D2J6 PGAM1;hCG_2015269;PGAM2 Phosphoglycerate mutase;Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 0 1 1 5.5 0.5 1 1 47.023 47.102 3 0.00010959 12496 20230619_1885_Aki_TMTPro18x_K_F5 121.56 103.82 94748 65675 76897 80915 72082 103730 75638 74958 134310 98403 94556 147840 162640 142940 69558 266780 194110 261530 87391 60296 79567 80739 75716 102440 77847 79225 131890 99850 102080 147860 159640 154100 80367 265110 184990 248210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88591000 20748 3475 19409 39323;39324 31538 31538 2121 1 9606 Homo sapiens -0.004244990877396049 PMQFLGDEETVRK Unmodified 1548.7606 0.76062794 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8;B4DKL5;B4DMJ7;B7Z9E5;B4DJA4;P15259;A4D2J6 PGAM1;hCG_2015269;PGAM2 Phosphoglycerate mutase;Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 0 0 1 6 0.816 1 1 1 52.697 52.77 3 2.9973999999999997E-21 15085 20230619_1886_Aki_TMTPro18x_K_F6 223.39 192.43 267940 181570 224960 245580 205160 324010 245520 246170 453820 327100 307080 437610 527310 470930 249500 756020 630760 811460 247160 166870 232040 243650 217080 319600 251500 259060 444520 330170 332070 440840 518750 499700 282500 756440 601070 769480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 485800000 20749 3475 19409 39325;39326;39327 31539;31540;31541 31540 3 9606 Homo sapiens 0.008198047748692261 PNAAIRDCDR Unmodified 1186.5513 0.55130386 1242 B4E0U6;A0A140VKA6;P50502;Q0IJ56;Q1XBU6;B7ZA40;H7C3I1;Q3KNR6;Q8IZP2;F6VDH7;D6W507 ST13;ST13P4;hCG_1990625 Hsc70-interacting protein;Putative protein FAM10A4 yes no 0 0 1 4 0 1 30.087 30.154 3 0.0024185 5641 20230619_1883_Aki_TMTPro18x_K_F4 76.416 46.162 104050 54618 89673 106240 104100 97055 78712 104790 109110 99591 104360 93334 109030 96651 62794 82142 155860 100150 95889 50506 92549 102840 106270 98980 81882 106330 109270 100750 107340 95146 109060 98850 69874 83746 147840 95137 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114430000 20750 1242 19410 39328 31542 31542 1 9606 Homo sapiens -0.034509736677364344 PNFAGTWK Unmodified 919.4552 0.45520186 2949 P29762;F1T0F7 CRABP1 Cellular retinoic acid-binding protein 1 yes no 0 0 0 3 0 1 52.662 52.721 2 0.0011171 15334 20230619_1882_Aki_TMTPro18x_K_F3 166.82 99.788 395540 360380 432500 407590 832600 1092900 613570 567050 651530 557670 471210 426930 604120 435940 538720 546260 482940 462460 366290 330230 442420 416270 828580 1040500 632090 614790 654990 560930 497580 439860 608680 455610 545900 542520 462470 440210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 449690000 20751 2949 19411 39329 31543 31543 1 9606 Homo sapiens -0.007747534454892957 PNFSGNWK Unmodified 948.44537 0.44536545 3522 P29373;Q5SYZ4 CRABP2 Cellular retinoic acid-binding protein 2 yes no 0 0 0 3 0 1 50.787 50.857 2 0.010087 14500 20230619_1882_Aki_TMTPro18x_K_F3 107.57 88.959 59193 52064 66717 51838 61507 80768 77235 79196 93473 150850 107950 116970 185030 114780 131560 193280 140690 151820 54817 47662 67007 52819 64819 79444 77486 82826 95272 147500 113480 120240 183560 122800 135560 190440 134600 144600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74275000 20752 3522 19412 39330 31544 31544 1 9606 Homo sapiens -0.030919414508616683 PNHTIYINNLNEK Unmodified 1568.7947 0.79470526 2252 B2R802;P09012;M0R268;M0R0G9;M0QXK2;M0R221;M0R2B8 SNRPA U1 small nuclear ribonucleoprotein A yes no 0 0 0 8 0 1 44.55 44.569 3 8.946E-08 11314 20230619_1888_Aki_TMTPro18x_K_F8 147.66 127.07 79625 58016 75315 87555 71682 94339 90235 79756 103850 100580 108580 112250 117700 90827 92899 123760 112030 120560 73544 53373 76912 86019 75381 94477 90308 83097 105200 100910 111580 112720 118600 96168 96133 123560 107060 114520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44721000 20753 2252 19413 39331 31545;31546 31545 2 9606 Homo sapiens 0.03305969258190089 PNMVTPGHACTQK Unmodified 1439.665 0.66495341 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;A0A0M4FNU3;H3BU78;A4UCS9;A4UCT0 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 1.5 0.5 1 1 37.535 37.565 3 3.4984E-06 9018 20230619_1880_Aki_TMTPro18x_K_F1 132.08 115.73 41682 26948 35183 37321 46916 55095 44159 46732 61823 59865 60378 86874 102280 99387 42099 176880 152100 224970 38442 24780 36475 37055 47805 54151 45225 48656 61983 60671 63947 87570 100450 106230 50713 178680 144970 212900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132410000 20754 3378 19414 39332;39333 31547 31547 1 9606 Homo sapiens -0.03729246616990167 PNMVTPGHACTQK Oxidation (M) 1455.6599 0.65986803 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;A0A0M4FNU3;H3BU78;A4UCS9;A4UCT0 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 1 0 4.5 3.5 1 1 33.459 33.455 3 0.00032986 6825 20230619_1888_Aki_TMTPro18x_K_F8 92.939 72.558 8934.9 5774 7056.3 12095 9948.8 12819 8956.7 10790 17851 13604 12741 25213 28927 25140 8717 45990 40771 73213 8236.6 5339.9 7399.9 11682 10117 12845 9358.6 11243 17487 13969 14077 25093 28101 27079 11206 47251 38924 69131 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54854000 20755 3378 19414 39334;39335 31548;31549 31549 1985 2 9606 Homo sapiens -0.04973550479598998 PNNLSLVVHGPGDLR Unmodified 1586.8529 0.85288884 3775 V9HW89;Q00796;A0A6I8PIS1;H0YKB3;Q00796-2;A0A6I8PRA7 HEL-S-95n;SORD Sorbitol dehydrogenase yes no 0 0 0 1 0 1 50.017 50.017 3 3.218E-33 14316 20230619_1880_Aki_TMTPro18x_K_F1 207.39 160.1 36155 25132 34375 39649 31442 45580 36417 33814 33379 35302 38479 45066 43743 43311 39454 52044 55703 59065 33386 23138 35068 38889 33102 45322 36350 35422 34394 35905 39523 45257 44336 45173 41162 52510 53163 56013 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92294000 20756 3775 19415 39336 31550 31550 1 9606 Homo sapiens 0.0829365090344254 PNVSAANPR Unmodified 924.47773 0.47772821 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;A0A140T954;P26640-2 VARS Valine--tRNA ligase yes no 0 0 0 6.5 0.5 1 1 32.292 32.385 2 0.045465 6314 20230619_1887_Aki_TMTPro18x_K_F7 67.993 40.468 7107.1 5046.2 7504.3 6556.3 10798 11718 7181 7232 13345 6906.2 10455 12187 10372 12372 11944 7980.7 12350 16204 6569.4 4634.9 7631.7 6561.7 10870 11354 7638.9 7689.4 13108 7180.5 10873 12131 10689 12518 12119 8563.9 11840 15289 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6894100 20757 725 19416 39337;39338 31551;31552 31552 2 9606 Homo sapiens 0.012468459521301156 PPYTVVYFPVR Unmodified 1336.718 0.71795849 3419 V9HWE9;P09211;A8MX94;Q5D6A5;A0A2R8Y5E5 HEL-S-22;GSTP1 Glutathione S-transferase P yes no 0 0 0 4.5 0.5 1 1 60.905 60.931 2 0.00028467 18158 20230619_1885_Aki_TMTPro18x_K_F5 144.09 97.663 268480 256690 242970 258990 482200 841360 376830 386330 763000 133830 154370 146820 133630 137680 206310 145170 160780 158690 248320 234950 253070 268570 482490 795200 397180 418880 729110 151040 186070 148430 140950 142620 205660 146730 154260 150590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 894480000 20758 3419 19417 39339;39340 31553;31554;31555 31555 3 9606 Homo sapiens 0.06306822499618647 PQAVGSSNYASTSAGLK Unmodified 1636.8057 0.80566387 3909 Q15018 FAM175B BRISC complex subunit Abro1 yes yes 0 0 0 1 0 1 46.592 46.592 3 3.3983E-06 12990 20230619_1880_Aki_TMTPro18x_K_F1 102.08 80.212 18933 16101 17690 20364 21820 22576 20880 21831 25999 22588 27447 26242 28143 24965 24191 28184 32907 33163 17502 14774 18149 20240 22311 22648 21268 22374 26241 22908 28109 26448 28529 25966 25170 28536 31403 31445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21455000 20759 3909 19418 39341 31556 31556 1 9606 Homo sapiens 0.012733268417832733 PQEAAVAPEKPPASDETK Unmodified 1863.9214 0.92142191 3524 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 0 0 1 4 0 1 42.873 42.917 3 0.0018334 10799 20230619_1883_Aki_TMTPro18x_K_F4 71.558 59.198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20760 3524 19419 39342 31557 31557 1 9606 Homo sapiens 0.02401805901968146 PQNEYIELHR Unmodified 1297.6415 0.64149908 3357 Q5J7U2;O95478;A0A0A0MQZ6 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog yes no 0 0 0 4 0 1 40.627 40.669 3 5.2182E-06 9828 20230619_1883_Aki_TMTPro18x_K_F4 161.27 130.84 73076 61871 69025 77981 82347 84784 76866 78044 92729 85923 98386 91169 89910 80154 85626 95688 98393 99236 67555 56770 70697 77504 84317 85082 78327 80413 93772 86594 100250 91985 91861 83853 87908 96080 94024 94214 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104840000 20761 3357 19420 39343 31558 31558 1 9606 Homo sapiens 0.00458398932369164 PQPPVAEATPR Unmodified 1161.6142 0.6142217 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;Q1WWK5;K7ER14;K7EJ51 SEPT9 Septin-9 yes no 0 0 0 4 0 1 38.385 38.428 2 0.0012759 8925 20230619_1883_Aki_TMTPro18x_K_F4 97.472 58.653 13090 9461.9 12516 12808 18208 21463 17006 17903 24129 19507 22163 22195 25082 24055 22032 29601 30289 30141 12090 8693.8 12853 12768 18455 20955 17431 18566 24088 19731 22957 22496 25393 25033 22954 29663 28900 28623 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8240200 20762 541 19421 39344 31559 31559 1 9606 Homo sapiens 0.039879153919855526 PQSHLYGPGETAR Unmodified 1411.6844 0.68442653 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;Q86SE4 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 5.5 0.5 1 1 34.291 34.358 3 9.0278E-22 7352 20230619_1886_Aki_TMTPro18x_K_F6 202.25 98.025 30270 21295 33116 35654 34086 39440 33808 39365 45323 39027 54988 69346 54826 51029 52369 50396 70159 64474 27987 19619 33433 34856 35347 39565 34489 40214 45863 40380 56051 68355 55890 53181 54261 51455 66917 61109 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 183500000 20763 2005 19422 39345;39346 31560;31561 31561 2 9606 Homo sapiens -0.004948310102008691 PQTLPLSYQDR Unmodified 1316.6725 0.67246486 2625 B4DYP7;Q96CW5-2;Q96CW5;A0A3B3ITE3;A0A087WU06;Q96CW5-3 TUBGCP3 Gamma-tubulin complex component 3 yes no 0 0 0 7 0 1 48.172 48.258 2 0.002198 12785 20230619_1887_Aki_TMTPro18x_K_F7 115.23 92.213 32187 24275 33608 37795 34496 38802 35199 31132 43542 46348 53942 49750 53147 44882 47641 57112 63698 59131 29759 22337 34060 37042 35793 38973 35714 32766 44306 46140 54784 50215 54017 47109 49477 57278 60759 56158 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20574000 20764 2625 19423 39347 31562 31562 1 9606 Homo sapiens 0.026795522465818067 PQVDMRK Unmodified 872.45382 0.45382165 1389 Q96PE2;A0A2X0TVV1;H0YFZ8 ARHGEF17 Rho guanine nucleotide exchange factor 17 yes no 0 0 1 7 0 1 37.972 38.036 3 0.007305 8477 20230619_1887_Aki_TMTPro18x_K_F7 81.297 45.651 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20765 1389 19424 39348 31563 31563 1 9606 Homo sapiens 0.012492891941178641 PQVIADYESGR Unmodified 1233.599 0.59896556 3287 O60869-2;O60869-3;O60869 EDF1 Endothelial differentiation-related factor 1 yes no 0 0 0 3.5 0.5 1 1 48.088 48.148 2 0.0077642 13316 20230619_1882_Aki_TMTPro18x_K_F3 79.23 67.74 37073 28216 34776 42925 36454 38606 40028 43434 50069 41236 46989 52275 57801 49746 46085 68139 63062 64412 34248 25956 35590 42063 37835 39464 40470 43988 50294 42143 48855 52527 58120 52353 48128 67897 60182 61213 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45889000 20766 3287 19425 39349;39350 31564 31564 1 9606 Homo sapiens -0.008489961958730419 PQVVVAPVLMSK Unmodified 1266.737 0.73697937 2851 D6REB4;Q9H074-2;A0A024R094;Q9H074-3;Q9H074;D6RJF2;D6RJ02;D6RD97;D6R9H8 PAIP1 Polyadenylate-binding protein-interacting protein 1 yes no 0 0 0 4 0 1 60.556 60.559 3 2.024E-05 18597 20230619_1883_Aki_TMTPro18x_K_F4 123.95 98.389 30276 22486 28844 32683 24433 32695 29396 30989 39177 37412 29816 35486 40943 33122 32744 50772 44293 44201 27968 20675 29382 32154 25927 32997 29659 31948 39010 37416 31553 36039 41054 35178 34177 50310 42267 42053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14062000 20767 2851 19426 39351 31565 31565 1 9606 Homo sapiens 0.1142803579905376 PQYQTWEEFSR Unmodified 1469.6575 0.65754307 3608 P49458;Q6P2S0;Q659G3;E9PE20;A0A024R3P3;P49458-2 SRP9;DKFZp564M2223 Signal recognition particle 9 kDa protein yes no 0 0 0 5 0.816 1 1 1 53.824 53.879 2 2.6259E-17 15708 20230619_1883_Aki_TMTPro18x_K_F4 239.36 217.89 323820 243530 341690 367600 340690 383760 335990 335810 333080 527520 532010 524580 566660 487570 462560 602810 580940 627760 299420 224010 345730 361060 353770 385640 339280 351530 348300 522460 537860 531460 572330 510320 479520 604870 555020 595810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1171300000 20768 3608 19427 39352;39353;39354 31566;31567;31568 31566 3 9606 Homo sapiens -0.058499396214074295 PREEVVQK Unmodified 983.53999 0.53999412 3913;3914 Q15056;A0A7I2V4E4;A0A7I2V3E4;Q75MT8;A0A7I2V3D5;Q15056-2;A4D198 EIF4H;WBSCR1;LOC392647 Eukaryotic translation initiation factor 4H no no 0 0 1 4.5 0.5 1 1 34.843 34.912 3 0.0036267 7529 20230619_1885_Aki_TMTPro18x_K_F5 101.64 16.58 30675 16787 44403 38432 57875 60891 39756 47186 50744 37417 57903 60631 48248 46111 48971 31401 53874 53983 28411 15562 44117 37287 58524 59513 41522 48866 51300 39069 58665 59972 49610 47258 49954 33122 51500 51033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38254000 20769 3913;3914 19428 39355;39356 31569 31569 1 9606 Homo sapiens 0.04756572300482276 PRPGNFER Unmodified 971.49371 0.49371263 4742 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog yes yes 0 0 1 8 0 1 30.679 30.694 3 0.069773 5885 20230619_1888_Aki_TMTPro18x_K_F8 56.378 28.496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20770 4742 19429 39357 31570 31570 1 9606 Homo sapiens 0.006825521890505115 PSCTIIPLMK Unmodified 1158.6141 0.61408704 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 3.5 0.5 1 1 59.442 59.444 3 0.0013168 18098 20230619_1883_Aki_TMTPro18x_K_F4 91.087 74.863 75839 66574 84837 66473 38647 78040 58157 66553 81671 98761 87176 112930 154670 111760 64129 212860 161470 179120 70227 60948 84651 67369 44627 77726 58343 69622 82241 98519 92188 114130 151400 120690 73008 209880 153680 170420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120500000 20771 3606 19430 39358;39359 31571;31572 31572 2 9606 Homo sapiens 0.04112456076131821 PSDNLIVCGR Unmodified 1129.555 0.55499226 674 B4DNL1;Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DJV5;Q86X79;Q05BL3;Q6PKI5;Q6PIN4;F8VZ56 PWP1 Periodic tryptophan protein 1 homolog yes no 0 0 0 6 0 1 44.411 44.5 2 0.0020322 11499 20230619_1886_Aki_TMTPro18x_K_F6 98.048 71.534 59474 41302 51714 61458 56808 68457 62027 64957 85327 77653 66365 79404 99821 72976 51044 122750 101550 99200 54883 37997 53323 60465 58850 68575 62944 66931 84900 77881 70467 80366 98489 78137 55946 120990 96654 94478 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47460000 20772 674 19431 39360 31573 31573 1 9606 Homo sapiens -0.0046030389382849535 PSENLGQVLFGER Unmodified 1444.731 0.73104237 9 B3KSG9;A0A024QYR8;Q99805 TM9SF2 Transmembrane 9 superfamily member 2 yes no 0 0 0 6 0 2 60.472 60.53 2;3 5.4777E-05 18326 20230619_1886_Aki_TMTPro18x_K_F6 122.42 99.683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20773 9 19432 39361;39362 31574;31575 31574 2 9606 Homo sapiens 0.026466088210554517 PSETPQAEVGPTGCPHR Unmodified 1818.8319 0.8318954 3548 P35520;P35520-2;B7Z2D6;C9JMA6 CBS Cystathionine beta-synthase yes no 0 0 0 3.5 0.5 1 1 35.196 35.249 3 3.8266E-49 7619 20230619_1882_Aki_TMTPro18x_K_F3 228.9 211.27 26170 20242 25378 23587 21842 26321 19441 19931 26551 30687 34740 36304 33314 28505 28072 33505 34425 35727 24184 18565 25776 23587 22938 26265 19988 21097 26988 30605 35195 36323 33798 29923 29019 33699 32885 33906 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342430000 20774 3548 19433 39363;39364 31576;31577 31576 2 9606 Homo sapiens -0.04476727258384017 PSGEEVLQDIQVMLK Unmodified 1684.8706 0.87057232 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHA9 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 6 0.816 1 1 1 65.28 65.318 3 2.2373E-05 20483 20230619_1886_Aki_TMTPro18x_K_F6 103.21 88.527 27873 18297 18357 22517 20405 24992 21653 23862 26689 28271 27259 30267 29829 25359 30239 32629 33061 34567 25669 16802 19496 22421 21120 25052 21922 24567 26944 28392 28079 30463 30385 26708 30911 32773 31616 32805 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35516000 20775 2188 19434 39365;39366;39367 31578 31578 1 9606 Homo sapiens 0.05553185323424259 PSHPPPDPPILEGAVGGNEAR Unmodified 2106.0494 0.049416394 495 Q14C86-6;Q14C86;Q14C86-2;Q14C86-5;Q14C86-4;A0A024R8A2;A0A024R862;F8W9S7;Q14C86-3;A0A024R875;B4DK42;C9IZ08;B3KN67;H0Y7I9;H0Y4E7 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 0 0 0 4 0 1 46.087 46.13 3 5.1546E-05 12227 20230619_1883_Aki_TMTPro18x_K_F4 83.251 62.312 31507 25897 33379 35070 40289 31476 40065 33149 34947 37432 47195 35857 37668 33517 39146 34607 38118 31654 29149 23783 33852 34615 41164 32174 40250 33894 36375 37546 47360 36428 38814 34699 39697 34618 36436 30120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14062000 20776 495 19435 39368 31579 31579 1 9606 Homo sapiens 0.04063366215905262 PSLPDRNDAAK Unmodified 1182.5993 0.59929991 458 A8K5G0;A0A024R7K0;M0R2Z9;Q8IX01-4;Q8IX01-3;Q8IX01;M0R3F6;B4DSQ4 SFRS14;SUGP2 SURP and G-patch domain-containing protein 2 yes no 0 0 1 6 0 1 38.01 38.086 3 0.0003693 8742 20230619_1886_Aki_TMTPro18x_K_F6 105.03 75.288 95053 62937 87221 99874 105380 111370 98810 93658 134390 110420 119340 123040 132870 113910 97970 141270 137560 127250 87729 57960 89592 97898 107890 111310 101080 97390 134250 111170 123710 124070 133570 119210 102660 140610 131160 121050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33296000 20777 458 19436 39369 31580;31581 31580 2 9606 Homo sapiens 0.015304235239909758 PSLSLGTITDEEMK Unmodified 1519.744 0.74397482 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 4.5 0.5 1 1 60.039 60.066 3 1.1766E-08 17907 20230619_1885_Aki_TMTPro18x_K_F5 151.74 131.07 53034 42310 61287 57763 57208 72935 61568 56008 68331 50152 49256 53163 56155 51638 52288 66887 54911 57077 49095 38864 61500 57249 59920 72172 62033 58254 68431 51150 51773 53812 56950 54086 53466 66381 52528 54308 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89907000 20778 349;3906 19437 39370;39371 31582 31582 1 9606 Homo sapiens 0.004892590983217815 PSMTLEPNK Unmodified 1015.5008 0.50083142 1006 A0A0C4DGH0;B4DK26;A8K6Q6;Q5ZPR3;H0YL10;A8K9J6;Q5ZPR3-2;Q5ZPR3-3;Q5ZPR3-4;H0YK40;H0YK59 CD276 CD276 antigen yes no 0 0 0 7 0 1 46.794 46.882 3 0.0019346 12163 20230619_1887_Aki_TMTPro18x_K_F7 73.157 34.138 74439 62791 64809 88358 125640 128210 117180 104560 140610 86019 93744 86243 95975 72989 93167 84603 92584 78307 68771 57684 67709 87564 125420 126070 119210 107960 139900 88067 98446 87134 97706 76373 94701 84522 88490 74495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27444000 20779 1006 19438 39372 31583 31583 1 9606 Homo sapiens -0.00629896045404621 PSNLLLNTTCDLK Unmodified 1487.7654 0.76537896 2491 B4DHN0;Q1HBJ4;P28482;P28482-2 MAPK1 Mitogen-activated protein kinase;Mitogen-activated protein kinase 1 yes no 0 0 0 1 0 1 59.734 59.734 3 0.026567 18310 20230619_1880_Aki_TMTPro18x_K_F1 53.516 0 40388 35628 35957 41080 33470 40189 40708 45297 41530 53720 52800 45648 58128 46738 45698 58543 57223 57156 37330 32658 36894 41038 35186 40825 40680 46127 42768 53566 53816 46781 58551 48824 47394 58523 54639 54302 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52863000 20780 2491 19439 39373 31584 31584 1 9606 Homo sapiens 0.041006889176742334 PSPETFVK Unmodified 903.47018 0.47018322 1271 A0A1B0GV93;B4DWS6;B3KQJ0;Q53GQ0;D3DR22 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes no 0 0 0 7 0 1 48.494 48.581 2 0.0093026 12935 20230619_1887_Aki_TMTPro18x_K_F7 95.741 54.795 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20781 1271 19440 39374 31585 31585 1 9606 Homo sapiens 0.014586936318551125 PSPIQEESIPIALSGR Unmodified 1692.9046 0.90464964 2256 P26196;B2R858;Q8IV96 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 0 5.5 0.5 1 1 57.608 57.672 3 4.7924E-08 17175 20230619_1886_Aki_TMTPro18x_K_F6 124.48 95.691 58638 47367 56731 50250 52598 59701 61522 52809 71595 59666 55734 67813 72159 55709 57179 75294 66034 74121 54202 43399 57690 50671 55227 59514 61806 54636 71729 60213 58724 68042 72390 58918 58998 75225 63151 70384 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 471700000 20782 2256 19441 39375;39376 31586 31586 1 9606 Homo sapiens 0.08591349806715698 PSPLLVGR Unmodified 837.50724 0.50723743 3846;755 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7I2V5M7;A0A7P0P2U7;A0A7I2YQU8;A0A7I2V651;Q6ZP53;E5RJU8;A0A7I2V2S5;Q13283-2;E5RH42;E5RIF8;E5RH00;A0A7I2V4Y8;A0A7I2V3C4;E5RI46;Q9UN86;Q9UN86-2;A0A024RDE5;A0A024RDB2;A8K6V7;A0A7I2YQD9;A0A7I2V3E2;A0A7I2YQS2;D6RB17;D6RAC7;D6R9A4;D6RBW8;A0A7I2V2R0;D6RGJ4;D6RBR0 G3BP1;DKFZp686L1159;G3BP;G3BP2 Ras GTPase-activating protein-binding protein 1;Ras GTPase-activating protein-binding protein 2 no no 0 0 0 3 0.816 1 1 1 46.023 46.09 2 0.0085953 12615 20230619_1881_Aki_TMTPro18x_K_F2 104.21 73.597 913820 746470 825310 902780 875280 1162500 907470 858550 1153500 658920 583580 412960 515770 397300 712220 626100 543390 393270 844300 684740 847160 901980 908270 1148300 920290 892860 1137000 670490 621870 430780 537750 422500 710950 612810 520500 376550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 773140000 20783 3846;755 19442 39377;39378;39379 31587;31588 31587 2 9606 Homo sapiens 0.0819840996828134 PSPLTLAPHDFANIK Unmodified 1619.8671 0.86714192 3646 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 2 0 1 57.227 57.244 3 2.2703E-14 17437 20230619_1881_Aki_TMTPro18x_K_F2 186.68 157.34 49833 39760 48242 54385 51435 58351 48647 43194 67253 67339 60876 61436 79279 66538 50516 95587 73097 82515 46060 36522 49218 53741 53150 58353 49781 45847 67262 66629 63528 62862 78984 69997 53375 94712 69785 78477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 669080000 20784 3646 19443 39380 31589 31589 1 9606 Homo sapiens 0.08200303331750547 PSPNIPIELIPHINK Unmodified 1680.9563 0.95629128 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B4DL23 CEP170 Centrosomal protein of 170 kDa yes no 0 0 0 2.5 0.5 1 1 61.026 61.046 3 9.9211E-08 19021 20230619_1881_Aki_TMTPro18x_K_F2 130.47 108.91 115830 63922 95676 112030 76489 91143 89063 85874 126950 79301 79076 82899 85295 77207 80578 105200 87384 107380 106730 59000 98665 108820 81487 93549 90240 88005 125120 80722 83681 83857 86700 81294 82542 105300 83681 101900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146460000 20785 1960 19444 39381;39382 31590 31590 1 9606 Homo sapiens 0.14305138291274488 PSQGMTAADDFFQGTR Oxidation (M) 1743.7522 0.75224809 3880;2441 B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 no no 0 1 0 5 0.816 1 1 1 50.344 50.405 3 2.2461E-06 13900 20230619_1885_Aki_TMTPro18x_K_F5 116.06 104.8 128470 107470 116040 136240 127640 131340 183860 119450 164410 160340 165010 161510 185660 177140 142060 199480 182880 187100 118710 98619 119250 135120 133020 132950 181310 124170 168600 159980 170140 164510 186930 183290 147800 199250 174610 177820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 197440000 20786 2441;3880 19445 39383;39384;39385 31591;31592 31592 1509 2 9606 Homo sapiens -0.08987793932419663 PSQGMTAADDFFQGTR Unmodified 1727.7573 0.75733347 3880;2441 B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 no no 0 0 0 5.5 0.5 1 1 55.922 55.992 3 1.2552000000000002E-25 16229 20230619_1885_Aki_TMTPro18x_K_F5 220.97 207.07 86983 61303 82972 83936 62845 79411 77031 74693 89340 97880 87192 94105 113360 99458 93052 117300 111100 112680 80330 56340 84325 82840 67355 80505 77268 77280 90323 97578 90748 95885 113940 103350 96107 117260 106140 107070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 279000000 20787 2441;3880 19445 39386;39387 31593;31594 31593 2 9606 Homo sapiens -0.07743490069810832 PSSLLGAAMPASTSAAALQEALENAGR Unmodified 2583.2963 0.29626496 81 A0A024R071;O75694;E9PF10;D6RA13 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 2 0 1 64.572 64.58 3 1.9112E-61 20649 20230619_1881_Aki_TMTPro18x_K_F2 260.03 245.93 5901.6 3249.3 3866.8 4479.5 4937.5 5118.1 5800.9 4691 4048.1 5869.3 6580 5592.3 5138.1 4959.2 6143.2 5642.6 6502.8 7546.3 5430.3 2990.1 4117.4 4429.4 5064.3 5117.3 5743.2 4856.1 4328.9 5856.3 6565.5 5670.6 5340.6 5174.1 6246.7 5766.7 6225.6 7143.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18445000 20788 81 19446 39388 31595 31595 1 9606 Homo sapiens 0.06794867861890452 PSSNLLEQFILLAK Unmodified 1571.8923 0.89229404 282 A0A024R471;Q9H9Q2;Q53GQ2;A0A087X1P5;J3KQ41;Q9H9Q2-3;J3QT66;J3QT95;J3QT43;J3QT50;J3QT67;J3KQV6 COPS7B COP9 signalosome complex subunit 7b yes no 0 0 0 3.5 0.5 1 1 66.597 66.622 3 1.2862E-05 21046 20230619_1883_Aki_TMTPro18x_K_F4 116.19 100.65 10831 9662.3 13243 11951 11013 11771 11366 9499.6 13634 13275 13277 16231 15387 12465 13395 17250 14359 16599 10039 8862.4 13208 11881 11619 11869 11513 9974.6 13752 13306 13750 16208 15539 13234 13732 17209 13745 15765 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11747000 20789 282 19447 39389;39390 31596 31596 1 9606 Homo sapiens 0.12922358134346723 PSSSPVIFAGGQDR Unmodified 1416.6997 0.69974224 3930 Q15366-3;Q15366-6;Q15366-2;Q15366;A0A384N6B9;B4DLC0;H3BSS4 PCBP2 Poly(rC)-binding protein 2 yes no 0 0 0 7 0.816 2 2 2 47.225 47.298 2;3 3.0937E-16 12289 20230619_1887_Aki_TMTPro18x_K_F7 253.76 219.04 192610 144140 178040 204740 170280 231770 192730 191100 234010 255090 245140 241200 298900 239080 187020 322610 260470 265340 177890 132490 182160 202010 178530 231220 194340 199750 236700 254000 253160 245560 297990 251100 196960 319240 248540 252610 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 883180000 20790 3930 19448 39391;39392;39393;39394;39395;39396 31597;31598;31599 31598 3 9606 Homo sapiens 0.008060357870135704 PSTFAYPAPLEVPK Unmodified 1515.7973 0.79733102 832 Q99460;A0A087WW66;B2R6D0;A0A7I2V523;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 1.5 0.5 1 1 61.057 61.063 3 3.1572E-05 18884 20230619_1880_Aki_TMTPro18x_K_F1 107.93 91.702 40486 30963 39273 44417 35139 40556 41364 33316 45976 58823 50554 46349 55646 45242 44386 70693 52383 55364 37412 28462 39966 43676 37011 41132 41485 35251 46836 57699 51837 47613 56088 48050 45924 69689 50063 52737 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 352970000 20791 832 19449 39397;39398 31600 31600 1 9606 Homo sapiens 0.06006424663087273 PSVDYVCQLK Unmodified 1207.5907 0.59070906 277 Q6FHH6;Q53TN2;B2R602;A0A024R3Z5;O43813 LANCL1 LanC-like protein 1 yes no 0 0 0 7 0 1 53.154 53.225 3 0.00028664 15012 20230619_1887_Aki_TMTPro18x_K_F7 91.867 62.394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20792 277 19450 39399 31601 31601 1 9606 Homo sapiens -0.004782664368576661 PSWADQVEEEGEDDK Unmodified 1732.7064 0.70640334 3162;3172 K7EL20;O75821;A8K5K5;K7ENA8;K7ENH0;B0AZV5;K7EL60;K7ER90 EIF3G Eukaryotic translation initiation factor 3 subunit G no no 0 0 0 1 0 1 53.473 53.473 3 9.6629E-06 15787 20230619_1880_Aki_TMTPro18x_K_F1 113.59 98.062 26387 16748 20405 28663 26182 33480 27489 26654 33619 27139 31446 33623 36529 35086 26303 42302 36401 48296 24319 15442 21370 27992 26834 33301 27820 27726 33797 27628 32591 33915 36674 36514 27577 42675 34813 45764 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58008000 20793 3162;3172 19451 39400 31602 31602 1 9606 Homo sapiens -0.13064160633598476 PSWLEEQ Unmodified 887.4025 0.40249759 889 B4DXH2;B4DUZ3;A0A087X1E4;P53365-2;P53365-3;P53365 ARFIP2 Arfaptin-2 yes no 0 0 0 2 0 1 57.646 57.661 2 0.069329 17703 20230619_1881_Aki_TMTPro18x_K_F2 77.496 50.699 17487 11218 19206 17023 16635 21489 18696 17965 34762 18663 19858 19194 22642 20188 17716 23975 20219 28502 16161 10327 19318 16769 17591 21294 19217 18616 33854 18888 21181 19510 22802 20998 18277 24263 19378 26993 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19627000 20794 889 19452 39401 31603 31603 1 9606 Homo sapiens -0.045707562989491635 PSYAFGSVGK Unmodified 1011.5025 0.50254598 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 2 0 1 50.654 50.706 2 0.00039191 14782 20230619_1881_Aki_TMTPro18x_K_F2 147.4 91.874 244430 180590 219940 256370 196890 260590 212300 209140 279570 293270 289800 315730 348100 281970 231830 441150 371720 335250 225700 166000 225350 252570 207280 261860 215330 219570 281590 292630 299410 318560 347970 300250 246660 434180 354050 319680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57310000 20795 3789 19453 39402 31604;31605 31605 2 9606 Homo sapiens -0.002745189651363944 PTFIGTEPSLGVK Unmodified 1344.7289 0.7289171 634 A0A024RAV0;P54687-4;P54687;P54687-5;P54687-3;P54687-2;A0A087WYF2 BCAT1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 0 0 4.5 3.5 1 1 58.078 58.101 2;3 4.4496E-06 17050 20230619_1888_Aki_TMTPro18x_K_F8 128.28 112.15 91171 75269 85102 105610 79617 99851 102640 95042 122180 119870 122630 132570 126520 108070 116750 139710 124220 147990 84261 69151 87020 104030 83878 101250 102740 98151 123380 120210 126030 133150 128550 113970 119450 140270 118950 140390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53776000 20796 634 19454 39403;39404 31606;31607 31607 2 9606 Homo sapiens 0.07034180083269348 PTGDFDSKPSWADQVEEEGEDDK Unmodified 2580.0776 0.077600797 3162;3172 K7EL20;O75821;A8K5K5;K7ENA8;K7ENH0;B0AZV5;K7EL60;K7ER90 EIF3G Eukaryotic translation initiation factor 3 subunit G no no 0 0 1 2.5 0.5 1 1 55.789 55.82 3 2.8336E-19 16918 20230619_1881_Aki_TMTPro18x_K_F2 155.76 147.79 29572 26427 30196 33387 24973 28126 27470 29718 29097 40546 36422 31667 39726 32129 32329 48379 34535 37397 27365 24244 30559 33077 26421 28881 27634 30538 29903 40106 37131 32601 40073 33986 33218 47690 33041 35626 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88519000 20797 3162;3172 19455 39405;39406 31608 31608 1 9606 Homo sapiens -0.14923489966622583 PTHGDIIR Unmodified 907.48756 0.48756462 1194 A0A140VJQ4;P04181;P04181-2;Q59HE2 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes no 0 0 0 4.5 0.5 1 1 31.266 31.337 3 0.0013456 6158 20230619_1885_Aki_TMTPro18x_K_F5 115.49 84.924 119890 60443 100040 111030 106870 112500 119410 114560 172670 136360 178540 193750 171970 166710 129570 218480 215860 233570 110440 55857 103440 107910 110910 113640 121290 117530 172920 138480 182630 193280 173950 175470 137770 219270 205830 221620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81329000 20798 1194 19456 39407;39408 31609;31610 31610 2 9606 Homo sapiens 0.030120339575205435 PTKPAASDLPVPAEGVR Unmodified 1703.9206 0.92063405 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;C9J813;B4E3I0;A0A6Q8PGI1;Q7Z2Y9 CALD1;DKFZp686P03208 Caldesmon yes no 0 0 1 7.5 0.5 1 1 46.745 46.813 3 0.00040766 12227 20230619_1888_Aki_TMTPro18x_K_F8 78.501 70.771 51069 39991 49600 54582 53450 65657 51727 58816 61254 64651 68287 70655 86195 70292 55929 92026 81683 83569 47198 36736 50599 54048 55238 65365 52587 60692 62189 65214 70493 71495 85965 73666 59027 91544 77918 79457 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107770000 20799 3798 19457 39409;39410 31611;31612 31611 2 9606 Homo sapiens 0.09683056043581928 PTTQQSPQDEQEK Unmodified 1514.6849 0.68488004 4389 Q96QK1;Q53FR4;I3L4S0;A0A1W2PP10;A0A3B3ITD4 VPS35 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 2 0 1 35.441 35.498 3 4.5144E-05 7870 20230619_1881_Aki_TMTPro18x_K_F2 114.79 99.398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20800 4389 19458 39411 31613 31613 1 9606 Homo sapiens -0.05187500871647899 PTVEELYR Unmodified 1005.5131 0.51311067 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;Q9BZZ5-5;B4DDR3;Q9BZZ5-3;E9PQK6 API5 Apoptosis inhibitor 5 yes no 0 0 0 3 0 1 46.943 47.022 2 0.0081338 12728 20230619_1882_Aki_TMTPro18x_K_F3 105.57 82.011 184220 152920 174310 207310 204150 225290 218530 217920 252640 259170 263750 258820 278570 217870 236320 315540 285660 282520 170280 140430 178560 205050 210120 226250 220550 224240 255990 259680 270670 261500 281740 231300 244220 313420 272820 268700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 539430000 20801 4478 19459 39412 31614 31614 1 9606 Homo sapiens 0.010574636892783928 PTWGNHTPIFR Unmodified 1324.6677 0.66765425 415 B3KUZ8;A0A024R6W0;P00505;A8K482;P00505-2 GOT2 Aspartate aminotransferase;Aspartate aminotransferase, mitochondrial yes no 0 0 0 4 0 1 46.145 46.189 3 1.9682E-06 12212 20230619_1883_Aki_TMTPro18x_K_F4 154.29 120.88 106590 86785 126520 124390 109270 122010 113560 106340 252740 120170 90125 116520 124520 123400 118960 117970 124200 111870 98708 79754 126580 122470 115230 123170 118420 110160 242760 120980 101770 118550 125940 126700 121330 118340 118700 106360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155010000 20802 415 19460 39413 31615 31615 1 9606 Homo sapiens 0.018307128945025397 PTYTNLNR Unmodified 977.49304 0.49304393 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;B4DDU2;F8VQQ4;F8VVB9;C9JDS9;Q9H853;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;P0DPH7-2;C9J2C0;Q9NY65-2;Q9NY65;Q6PEY2;Q7Z3M3;A0A7P0T945;A0A7P0TA31 TUBA1B;TUBA1A;TUBA4A;TUBA4B;TUBA1C;TUBA2;TUBA8;TUBA3E;DKFZp686L04275 Tubulin alpha-1B chain;Putative tubulin-like protein alpha-4B;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain no no 0 0 0 8 0 1 37.508 37.493 2 1.6611E-05 8471 20230619_1888_Aki_TMTPro18x_K_F8 141.39 90.423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20803 2408;3747;4144 19461 39414 31616 31616 1 9606 Homo sapiens 0.0033971274932582674 PVAGSELPR Unmodified 924.50288 0.50288033 2134 Q53Y97;Q53FB7;A8K9A5;P04818;P04818-3;P04818-2 TYMS Thymidylate synthase yes no 0 0 0 4.5 0.5 1 1 39.959 40.025 2 0.00036135 9554 20230619_1885_Aki_TMTPro18x_K_F5 138.54 109.4 54067 44067 54545 60577 60072 65887 58321 53935 78014 63197 68868 72788 65747 60948 66558 60905 68895 62412 49996 40477 55484 59860 61941 65943 59505 56206 77953 63711 70983 73017 67276 63227 67761 61323 65851 59287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50217000 20804 2134 19462 39415;39416 31617 31617 1 9606 Homo sapiens 0.037609007547075635 PVAQEPERIEFGGNIK Unmodified 1782.9264 0.92644771 4397 Q96T23-2;Q96T23;H0YER1;Q96T23-3;H0YCN2 RSF1 Remodeling and spacing factor 1 yes no 0 0 1 6 0 1 49.62 49.698 3 0.016577 13782 20230619_1886_Aki_TMTPro18x_K_F6 61.524 38.288 79226 63291 67913 86049 65573 73956 73462 74142 77272 93414 88525 89079 103560 81104 74364 132300 99752 103370 73160 58133 70000 84835 68545 75700 73762 76276 79056 93209 90929 90444 103810 86621 77860 130320 95222 98471 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41346000 20805 4397 19463 39417 31618 31618 1 9606 Homo sapiens 0.06630154555250556 PVASDSTYFAWCPDGEHILTATCAPR Unmodified 2921.3113 0.3112631 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;Q9BY44-2;H7C5R5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 7 0 1 61.164 61.203 3 3.5235E-29 18331 20230619_1887_Aki_TMTPro18x_K_F7 188.98 182.62 14516 11224 14868 12376 13841 14694 12703 12377 14977 19752 18466 17840 23059 19442 15642 29012 20369 29748 13421 10289 15039 12443 14426 14638 12957 12999 15300 19509 18970 18273 23038 20515 16376 28994 19509 28212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140110000 20806 4468 19464 39418 31619 31619 1 9606 Homo sapiens -0.07254008332529338 PVAVGPYGQSQPSCFDR Unmodified 1863.8574 0.85738187 3676 P60602-2;P60602 ROMO1 Reactive oxygen species modulator 1 yes no 0 0 0 7.5 0.5 1 1 49.502 49.58 3 5.8092E-24 13335 20230619_1888_Aki_TMTPro18x_K_F8 212.03 203.32 52253 42046 54332 59330 46479 58326 54620 59883 60675 66990 66585 65363 75266 61305 60718 76426 70532 68454 48328 38635 54938 58470 49170 59059 54830 61251 61747 67255 68399 66314 75834 64174 62626 76070 67376 65110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 402450000 20807 3676 19465 39419;39420 31620 31620 1 9606 Homo sapiens -0.039992527359572705 PVCAVLLLFPITEK Unmodified 1598.9106 0.91058664 1214 A0A140VJZ4;P15374;A0A087WTB8 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 0 5 0 1 66.682 66.725 3 4.3498E-05 20858 20230619_1885_Aki_TMTPro18x_K_F5 102.66 82.199 7378.7 3384.5 7906.4 8805.6 5096.2 6494 7165.9 7495.5 10547 8131.1 10682 11076 9188.4 8260.4 11737 9886.5 10120 14397 6808.2 3148.9 7951.2 8407.1 5582.8 6753.2 7214.4 7611.1 10542 8275.7 10895 11016 9547.3 8703.3 11792 10165 9728 13610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9623100 20808 1214 19466 39421 31621 31621 1 9606 Homo sapiens 0.13508776784669863 PVCSFDPEGLIFAAGVNSEMVK Unmodified 2366.1287 0.12865427 223 Q6UXN9;A0A024R333;C9JBU3 WDR82;TMEM113 WD repeat-containing protein 82 yes no 0 0 0 8 0 1 65.123 65.143 3 0.031618 20006 20230619_1888_Aki_TMTPro18x_K_F8 44.499 33.711 35812 23485 33374 40196 31192 27159 36691 27657 35814 28295 34462 34778 30745 32416 41579 35938 27578 39422 33055 21651 34104 39019 32656 28468 36637 28303 36444 28778 35290 34945 32038 33674 41293 36273 26604 37363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19005000 20809 223 19467 39422 31622 31622 1 9606 Homo sapiens 0.00023509063521487406 PVDFTGYWK Unmodified 1111.5338 0.53384611 3420 P09455;A0A0A0MTB9;H0YAK8 RBP1 Retinol-binding protein 1 yes no 0 0 0 1.75 0.829 2 1 1 61.651 61.661 2;3 0.00021031 19316 20230619_1881_Aki_TMTPro18x_K_F2 124.92 91.056 621310 525010 683940 620720 416260 465330 677890 668730 670390 674600 679820 707490 689690 639880 732070 824770 727500 811190 575100 481430 685190 617560 460220 487120 668480 669480 683650 682160 697950 714690 705970 671790 743980 824800 696690 770310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 689480000 20810 3420 19468 39423;39424;39425;39426 31623;31624 31624 2 9606 Homo sapiens -0.01745945931065762 PVESMPFLPQALPTSPPW Unmodified 1993.0019 0.0019208405 3149 J3QSH4;Q14119;J9JIC7 VEZF1 Vascular endothelial zinc finger 1 yes no 0 0 0 2 0 1 67.729 67.736 3 0.0016708 21888 20230619_1881_Aki_TMTPro18x_K_F2 70.98 62.595 2219.9 2444.6 1524.4 1499.6 1217.2 1805.6 0 900.26 2328.6 1127.1 1038.8 1324.3 1533.5 800.29 0 2038.7 1382.6 2114.4 2051.8 2229.4 1600.1 1599.2 1268 1784.6 0 986.67 2187 1136.5 1146 1318.8 1475.3 910.68 0 2025.7 1314.6 2004.7 1 1 1 1 1 1 0 1 1 1 1 1 1 1 0 1 1 1 838630 20811 3149 19469 39427 31625 31625 1 9606 Homo sapiens 0.045139956913544665 PVFATVDGQEK Unmodified 1189.5979 0.59790293 1879 A0A994J5K1;Q5SXN9;Q10713;A0A994J7S6;B4DRK5;A0A994J5C0;A0A994J5X6;A0A994J5K6;A0A994J5B5 PMPCA Mitochondrial-processing peptidase subunit alpha yes no 0 0 0 4.5 0.5 1 1 51.072 51.125 3 6.2144E-05 14218 20230619_1885_Aki_TMTPro18x_K_F5 127.51 113.52 57809 42586 50296 47947 48453 50776 50262 46754 63228 43138 41563 41942 47599 36753 44642 53230 43885 43740 53364 39054 51665 48042 50542 51060 50967 47964 62769 43800 43935 42486 48233 38958 45453 52670 41995 41645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89265000 20812 1879 19470 39428;39429 31626 31626 1 9606 Homo sapiens 0.010687894352031435 PVFVPDVALIANR Unmodified 1409.8031 0.8030851 208 A0A024R2P4;Q8NAT1 C3orf39;POMGNT2 Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 yes no 0 0 0 2 0 1 62.864 62.873 3 0.0068334 19900 20230619_1881_Aki_TMTPro18x_K_F2 56.493 40.602 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20813 208 19471 39430 31627 31627 1 9606 Homo sapiens 0.11457567965476301 PVGGLLPLFSSPAGGVLGGGLGGGGGR Unmodified 2305.2543 0.25426421 3543 P33908;P33908-2 MAN1A1 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA yes no 0 0 0 8 0 1 65.32 65.339 3 8.4725E-06 20119 20230619_1888_Aki_TMTPro18x_K_F8 88.976 85.587 5000.6 3937.9 4266.2 5019.2 3292.7 3548.5 5106.3 5743.6 5915 6319.3 5787.3 4259.3 6494.2 4109.9 6375.4 6355.8 5108 5546.6 4617.3 3614.6 4385.2 4962.7 3547.3 3750.4 5070.1 5728.9 5977.5 6289.5 5965.5 4419.3 6588.2 4371 6415.2 6305.3 4902.6 5275.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18790000 20814 3543 19472 39431 31628 31628 1 9606 Homo sapiens 0.1538472502620607 PVGSLAGIGEVLGK Unmodified 1295.7449 0.74490152 340 A0A024R5H0;O75531;B2R4V4 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed yes no 0 0 0 2 0 1 62.689 62.698 2 3.4890999999999997E-28 19827 20230619_1881_Aki_TMTPro18x_K_F2 245.58 194.14 138440 90330 114990 143760 90051 149200 118340 126730 207030 184070 158390 300500 325420 333910 122410 464460 175960 566900 127670 83196 118610 140730 96912 149750 120410 132630 204100 186710 172790 300950 317630 350080 133070 469160 170550 535920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73354000 20815 340 19473 39432 31629 31629 1 9606 Homo sapiens 0.10885886320170357 PVHHGVNQLK Unmodified 1127.62 0.61997578 210 A0A024R2Q4;P61313;A0A2R8YEM3;E7EQV9;E7ENU7;B4DLP4;E7EX53;A0A2R8Y738;P61313-2;B4DEN1;A4D1Q5 RPL15;LOC136321 Ribosomal protein L15;60S ribosomal protein L15 yes no 0 0 0 3.5 2.69 1 1 1 1 31.657 31.693 4 0.00045453 6626 20230619_1880_Aki_TMTPro18x_K_F1 96.711 65.071 277910 122540 247620 296860 306880 323930 300720 320010 424450 357530 383990 488490 562090 486470 275420 600250 633000 602680 256000 113870 255230 285430 314080 325110 307360 328210 423800 363550 403960 489990 554900 507750 306590 600480 601990 572510 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 811460000 20816 210 19474 39433;39434;39435;39436 31630;31631;31632;31633 31630 4 9606 Homo sapiens 0.06127058694301013 PVIACSVTIK Unmodified 1086.6107 0.61071622 1527 A0A3B3IUA2;Q6FHM6;B1AHD1;P55769;A0A3B3IRU2 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 0 0 0 3 0 1 52.626 52.685 3 0.00087726 15357 20230619_1882_Aki_TMTPro18x_K_F3 94.692 48.534 55210 41164 61042 63643 65590 67981 68839 54340 69012 66756 67264 57896 67981 52281 56195 67410 64521 54566 51068 37876 61605 62442 67787 68094 69204 56842 70241 66556 69056 59019 68765 54929 57868 66753 61584 52000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108040000 20817 1527 19475 39437 31634 31634 1 9606 Homo sapiens 0.07087529293767147 PVICATQMLESMIK Unmodified 1619.8085 0.80850611 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 3.5 0.5 1 1 66.297 66.321 3 0.001209 20997 20230619_1883_Aki_TMTPro18x_K_F4 70.622 58.456 7002.7 4596.4 5402.4 8210.5 7451.9 7163.3 6493.9 5568.9 7870.5 8830.3 6798.8 7530.6 9346.4 9019.8 7379.9 11570 10106 15052 6455 4239.9 5666.6 7968.9 7550.5 7285.8 6642.3 5893.4 7912.1 8714.4 7141.8 7755.9 9376.4 9394.3 7714.4 11764 9677.4 14241 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9319800 20818 370;3451 19476 39438;39439 31635;31636 31636 2 9606 Homo sapiens 0.023394193790636564 PVILLPEDTPPFLELK Unmodified 1820.0335 0.033538545 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;A0A8V8TPJ4 MSH6 DNA mismatch repair protein Msh6 yes no 0 0 0 7.5 0.5 1 1 65.722 65.744 3 0.00012018 20257 20230619_1888_Aki_TMTPro18x_K_F8 92.935 78.012 12240 9836.1 11600 12551 9433.9 14033 11915 10850 12832 15490 16047 13656 13494 14143 14554 18553 12964 17234 11312 9028.1 11814 12467 10067 13996 11903 11433 13155 15352 16188 13977 13918 14794 14719 18487 12449 16368 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73136000 20819 1853 19477 39440;39441 31637 31637 1 9606 Homo sapiens 0.1563231171694497 PVINSTPGR Unmodified 939.51378 0.51377937 2446 Q99459;B3KY60;B4DSH1 CDC5L Cell division cycle 5-like protein yes no 0 0 0 8 0 1 36.861 36.846 2 0.0017538 8186 20230619_1888_Aki_TMTPro18x_K_F8 112.84 86.24 21989 12095 16129 16964 21951 22803 18639 19679 32513 22303 25543 29578 29016 29523 19149 36816 37926 40737 20246 11132 16960 16802 22285 22543 19406 20386 32030 22655 26694 29710 29096 30820 20780 37040 36126 38640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18577000 20820 2446 19478 39442 31638 31638 1 9606 Homo sapiens 0.04160303128992382 PVIVEPLEQLDDEDGLPEK Unmodified 2134.0681 0.06814573 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 2 0.816 1 1 1 63.134 63.148 3 1.3609E-14 20030 20230619_1881_Aki_TMTPro18x_K_F2 122.29 106.66 71011 39585 56919 76322 58588 69970 60144 62453 77532 77581 80936 73000 87954 64168 71276 95995 77541 86329 65423 36587 59131 73877 60877 70996 61110 64749 78157 77466 83110 74086 88677 68207 73260 95331 74191 82066 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 458370000 20821 1450 19479 39443;39444;39445 31639;31640 31639 2 9606 Homo sapiens 0.046474382763790345 PVLNFYEANFPANVMDVIAR Oxidation (M) 2295.1358 0.13578856 3137 P17844;J3KTA4;B5BUE6;B4DN41;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;J3QRQ7;J3KTQ4 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 yes no 0 1 0 2 0 1 64.515 64.523 3 5.6137E-08 20633 20230619_1881_Aki_TMTPro18x_K_F2 106.7 92.871 17288 14952 19017 20875 17862 17418 16513 17173 23172 21845 20994 24745 23798 21600 26256 27593 26761 27583 16005 13734 19161 20544 18599 17876 16944 17695 23151 21920 21798 24876 24329 22693 26691 27628 25606 26196 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31645000 20822 3137 19480 39446 31641;31642 31641 1822 2 9606 Homo sapiens 0.04002609726239825 PVLNFYEANFPANVMDVIAR Unmodified 2279.1409 0.14087394 3137 P17844;J3KTA4;B5BUE6;B4DN41;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;J3QRQ7;J3KTQ4 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 3 0 1 66.34 66.376 3 5.1934E-17 21086 20230619_1882_Aki_TMTPro18x_K_F3 167.99 156.95 2619.5 3663.5 4010.5 3693 2862.5 5014.1 4709.6 3325.1 4770.3 5076.3 3213.1 4293.3 4218.4 3498.5 2970.9 5123.9 4163 6363.3 2443.5 3349.7 3942.8 3745.6 3123.2 4928.7 4639.7 3563.7 4799.6 5014.3 3420.8 4361.4 4215.8 3724.9 3121.5 5184.1 3986.9 6022.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3862700 20823 3137 19480 39447 31643 31643 1 9606 Homo sapiens 0.05246913588825919 PVLTQESATYIAEEYSR Unmodified 1955.9476 0.94763666 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46;Q7Z6P5 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 5 0.816 1 1 1 59.454 59.493 3 7.5356E-19 17710 20230619_1885_Aki_TMTPro18x_K_F5 188.27 181.21 23977 18994 24259 21085 21890 25124 26906 24343 25218 24519 23523 26967 28856 24434 23932 31953 29250 34448 22168 17411 24568 21191 23055 25084 26787 24933 25728 24845 24474 27183 29054 25690 24762 32101 27971 32673 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41017000 20824 1104 19481 39448;39449;39450 31644 31644 1 9606 Homo sapiens 0.007900750735188922 PVNAIIEHVR Unmodified 1146.6509 0.65094155 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 0 4.5 3.5 1 1 48.623 48.623 3 1.1302E-05 13751 20230619_1880_Aki_TMTPro18x_K_F1 150.1 128.64 14730 11373 14152 14661 14946 16343 17855 14218 18754 16020 17666 22116 23424 17687 15646 29561 23900 27934 13611 10442 14441 14556 15537 16350 17852 14736 19007 16286 18452 22038 23350 19020 16581 29376 22816 26535 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45453000 20825 1229 19482 39451;39452 31645;31646 31645 2 9606 Homo sapiens 0.0834821200855913 PVPAAPVPSPVAPAPVPSR Unmodified 1805.02 0.019954166 4675;4676 Q9UK76;Q9UK76-3 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed no no 0 0 0 2.5 0.5 1 1 52.856 52.902 3 0.00012076 15460 20230619_1882_Aki_TMTPro18x_K_F3 77.795 63.105 59338 58057 58289 73406 65168 69798 92177 104610 115450 89595 68016 59134 86802 76460 77133 89438 73204 95715 54928 53246 59521 72845 67873 71640 92042 103980 114370 90458 72786 62062 87569 79029 78464 89977 70235 90762 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114630000 20826 4675;4676 19483 39453;39454 31647 31647 1 9606 Homo sapiens 0.1496449872836365 PVPDGDAKQR Unmodified 1081.5516 0.55162144 1908 A1X283;G3V144;A0A1B0GUF2 SH3PXD2B SH3 and PX domain-containing protein 2B yes no 0 0 1 6.5 0.5 1 1 58.994 59.051 3 0.071976 17714 20230619_1886_Aki_TMTPro18x_K_F6 36.585 11.662 95761 85423 86736 92932 72453 92730 99430 85306 73565 118370 107980 117170 132420 110050 106130 145260 123920 130480 88528 78256 88706 93262 77151 93626 97918 88602 77994 117740 110310 118760 133100 115610 109590 144460 118440 124070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169540000 20827 1908 19484 39455;39456 31648 31648 1 9606 Homo sapiens 0.014107693237974672 PVQDLIK Unmodified 811.48035 0.48035398 261 A0A024R3T8;P09874;B4E0E1;B2R5W3 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 6.5 0.5 1 1 51.931 52.007 2 0.0075799 14386 20230619_1887_Aki_TMTPro18x_K_F7 124.08 63.118 186000 126830 156820 176520 178900 281490 174700 172680 269530 140720 153560 127310 153060 122360 168640 206370 192060 166630 171590 116600 162270 175370 184910 273870 179220 183040 264160 143940 162830 130000 157030 130810 172700 203680 183350 158780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 559920000 20828 261 19485 39457;39458 31649 31649 1 9606 Homo sapiens 0.06707301357096185 PVQTSAVTGQASTGPVTQIIQTK Unmodified 2311.2383 0.23833938 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 3 0 1 56.651 56.687 3 8.9156E-13 17057 20230619_1882_Aki_TMTPro18x_K_F3 131.82 112.22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20829 1331 19486 39459 31650 31650 1 9606 Homo sapiens 0.1351697399868499 PVRPGGGDTSPR Unmodified 1194.6105 0.6105333 4040 Q5JSZ5;Q5H9R5;A0A804HJR4;A0A804HKC3 PRRC2B;DKFZp781F05101 Protein PRRC2B yes no 0 0 1 6 0 1 28.203 28.235 3 0.022701 5165 20230619_1886_Aki_TMTPro18x_K_F6 62.14 39.223 28600 15269 22874 23925 24266 22806 22121 23294 30894 16867 18467 15028 19183 17351 17223 13238 19787 14885 26345 14075 23729 23428 25039 23157 22701 23595 30439 17368 19537 15428 19476 17605 17664 13480 18873 14138 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3666500 20830 4040 19487 39460 31651 31651 1 9606 Homo sapiens 0.021012456181324524 PVSPLLLASGMAR Unmodified 1310.738 0.738042 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;G3V4N7;H0YJG0;B4DNF8;B4DUP1;B2R892;P06732 HEL-S-29;CKB;HEL-211;CKM Creatine kinase B-type;Creatine kinase M-type;Creatine kinase M-type, N-terminally processed yes no 0 0 0 5.5 0.5 1 1 61.686 61.738 3 2.3531999999999996E-21 18887 20230619_1886_Aki_TMTPro18x_K_F6 225.15 179.32 61768 51454 60014 63604 66193 84339 58865 63966 91731 66255 63357 70751 79962 74927 66892 97394 84649 99498 57109 47205 61229 63487 68233 83212 60797 66800 90423 67071 67102 71808 80549 78313 69405 97526 80923 94427 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152390000 20831 3441 19488 39461;39462 31652;31653 31653 2 9606 Homo sapiens 0.09510250167954837 PVSSPFPTKPLEGQAEGDSGECK Unmodified 2416.1217 0.12165464 312 A0A024R4X7;Q9UKX7-2;Q9UKX7;B4E2D3 hCG_1989366;NUP50 Nuclear pore complex protein Nup50 yes no 0 0 1 6 0 1 51.832 51.909 4 0.035 14743 20230619_1886_Aki_TMTPro18x_K_F6 47.744 39.456 36645 30106 33294 33959 29355 37631 37328 38706 35943 42022 44927 43941 52988 46665 45131 50903 49596 52078 33860 27597 34053 34042 31055 37792 37153 39549 37081 42341 46020 44634 53458 48266 46309 51137 47427 49442 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21926000 20832 312 19489 39463 31654 31654 1 9606 Homo sapiens -0.029761322833564918 PVTALEYTFSR Unmodified 1282.6558 0.65575216 3652 P54709;C9JA36;D3DNF9;P54709-2;C9JXZ1 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes no 0 0 0 1 0 1 61.14 61.14 2 8.1323E-07 18926 20230619_1880_Aki_TMTPro18x_K_F1 133.76 108.18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20833 3652 19490 39464 31655 31655 1 9606 Homo sapiens 0.025730513606504246 PVTLLASLFK Unmodified 1087.6641 0.664132 201 A0A024R2H7;A0A8V8TM71;Q96Q11-2;Q96Q11 TRNT1 CCA tRNA nucleotidyltransferase 1, mitochondrial yes no 0 0 0 8 0 1 66.614 66.633 3 0.015182 20586 20230619_1888_Aki_TMTPro18x_K_F8 69.276 48.405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20834 201 19491 39465 31656 31656 1 9606 Homo sapiens 0.12380650067939314 PVTPVCR Unmodified 827.43236 0.43235793 4461 Q9BX67;Q9BX67-2;H0YD98 JAM3 Junctional adhesion molecule C yes no 0 0 0 7.5 0.5 1 1 35.347 35.335 2 0.025253 7619 20230619_1888_Aki_TMTPro18x_K_F8 98.133 23.798 18709 12432 20663 20165 24754 26585 20974 20034 34641 27598 30181 41794 45574 37333 21567 41120 55365 69090 17294 11452 20883 19799 25304 26239 21785 21130 34337 27948 31890 41605 44916 38905 24326 42749 52741 65275 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11352000 20835 4461 19492 39466;39467 31657;31658 31658 2 9606 Homo sapiens 0.011739041653981985 PVTVEPMDQLDDEEGLPEK Unmodified 2139.9882 0.98818085 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;H7C367 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 2 0.816 1 1 1 60.53 60.544 3 3.5025E-15 18809 20230619_1881_Aki_TMTPro18x_K_F2 165.9 149.95 60580 39512 65483 73086 52341 83799 72220 63601 79430 83812 77561 84060 92458 80925 78695 100690 87971 94759 55983 36467 66000 71106 56131 83341 71884 66948 80480 83657 80362 85214 93261 84608 80901 100470 84127 90041 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 227590000 20836 1112 19493 39468;39469;39470 31659;31660 31660 2 9606 Homo sapiens -0.03621371389044725 PVVEMDGDEMTR Oxidation (M) 1393.5854 0.58536569 3600 Q53GL5;P48735;H0YL11 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 1 0 1 0 2 42.266 42.266 2 0.00028172 10651 20230619_1880_Aki_TMTPro18x_K_F1 110.53 87.753 57741 42180 52254 59823 58982 68396 61090 58429 79116 69539 76777 98615 97308 91617 74153 117910 121310 152940 53314 38775 53689 59044 60858 68261 62021 60706 79479 70612 79908 98566 97687 96128 78664 119860 115830 144780 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 33806000 20837 3600 19494 39471;39472 31661;31662;31663 31661 2266;2267 3 9606 Homo sapiens -0.09568358081628503 PVVEMDGDEMTR Unmodified 1377.5905 0.59045107 3600 Q53GL5;P48735;H0YL11 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 0 0 1 0 1 48.133 48.133 2 1.1333E-17 13605 20230619_1880_Aki_TMTPro18x_K_F1 233.84 220.38 20743 11796 19342 19940 16346 29099 19326 20696 30186 28873 25708 40728 49522 44371 24391 59242 54290 83530 19134 10881 19736 19568 17409 28494 19652 21939 29989 29131 27700 40936 48649 46465 27096 60519 51858 78972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21315000 20838 3600 19494 39473 31664 31664 1 9606 Homo sapiens -0.08324054219019672 PVWYSPK Unmodified 875.45414 0.45413923 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 2.5 0.5 1 1 52.298 52.35 2 0.0057929 15146 20230619_1882_Aki_TMTPro18x_K_F3 138.07 90.226 155030 120480 131820 153450 136210 191910 148280 142340 212100 133180 115930 113550 137260 101820 129100 160650 136170 82847 143130 110600 136080 152680 141970 189880 150690 148620 208440 134720 124390 115870 138980 108480 131970 156070 129850 79709 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78746000 20839 3402 19495 39474;39475 31665 31665 1 9606 Homo sapiens 0.01143032185609627 PVYPGQTLQTEMWK Unmodified 1676.8232 0.82322819 1097 P51659;A0A0S2Z4J1;B2R659;E7EPL9;A0A804HK65;A0A2R8YD50;P51659-2;P51659-3;B4DSD0;B4DDM5;A0A804HKU2;A0A2R8Y7L2;B4DI68;E7ET17;B3KSP2;A0A804HIR1;Q59H27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 0 0 0 1 0 1 60.579 60.579 3 3.6441E-07 18729 20230619_1880_Aki_TMTPro18x_K_F1 138.42 118.84 23450 18129 22848 20974 15577 23942 20581 18129 24858 28079 28437 29939 33534 29644 21522 37076 36014 34212 21671 16626 23145 20992 16951 23842 20604 19199 25241 27909 29224 30306 33514 30971 22981 36931 34306 32531 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46815000 20840 1097 19496 39476 31666 31666 1 9606 Homo sapiens 0.011889508430840579 PWISLPR Unmodified 867.49667 0.49667274 2202 Q96IR1;B2R491;P62701;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 0 0 0 5 0 1 56.366 56.427 2 0.010649 16391 20230619_1885_Aki_TMTPro18x_K_F5 117.7 67.579 79675 57945 65145 79260 54845 98664 62853 70608 136330 68020 52962 83592 110410 99266 53043 204310 155850 152620 73511 53246 67351 78482 58504 97529 65132 74004 131260 69586 60894 84922 108380 107310 61460 200210 148100 145520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139120000 20841 2202 19497 39477 31667 31667 1 9606 Homo sapiens 0.05762427313845819 PYFLEAYRPIR Unmodified 1423.7612 0.76122028 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1;A0A7P0T9X5 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 1 5 0 1 54.483 54.55 3 3.1651E-17 15638 20230619_1885_Aki_TMTPro18x_K_F5 180.07 142.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20842 3656 19498 39478 31668 31668 1 9606 Homo sapiens 0.06629012276926005 PYFPIPEEYTFIQNVPLEDR Unmodified 2466.2107 0.21072764 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 6.5 0.5 1 1 64.949 64.985 3 6.4667E-45 20079 20230619_1887_Aki_TMTPro18x_K_F7 250.08 236.62 106330 61565 94514 117180 75298 123100 94294 108060 142520 131790 116560 143810 203300 198010 90335 289330 217670 303100 98054 56792 96882 113710 80688 123490 95501 112060 141510 132440 124640 147560 199720 207220 102010 289350 207630 287430 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 698110000 20843 3776 19499 39479;39480 31669;31670;31671 31671 3 9606 Homo sapiens 0.0362707073850288 PYHGGGAPLR Unmodified 1023.525 0.52501276 71 A0A024QZY1;Q13155;Q13155-2;F8WCL2 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes no 0 0 0 5.33 3.09 1 1 1 31.782 31.815 3 1.4052E-06 6214 20230619_1888_Aki_TMTPro18x_K_F8 168.27 152.6 92430 53114 92936 99609 103520 117220 97989 104540 134320 103750 107040 104970 109880 96921 100500 130880 129930 104680 85313 49063 94561 96914 106630 116820 100250 107630 133620 105020 111210 106310 111690 101980 104140 129430 123860 99799 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129710000 20844 71 19500 39481;39482;39483 31672;31673 31673 2 9606 Homo sapiens 0.014191252231398721 PYIQVDIGGGQTK Unmodified 1374.7143 0.71432967 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 8 0 1 54.465 54.532 3 6.714E-08 15492 20230619_1888_Aki_TMTPro18x_K_F8 115.75 95.911 494180 348510 452570 508380 512860 521960 532180 520920 605070 623530 643530 679760 671620 567320 598970 731210 670020 780490 456240 320520 464390 500250 528260 526740 537750 535080 614060 626300 659900 683710 681130 597660 615060 734480 641140 740380 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 446720000 20845 3429 19501 39484 31674;31675;31676 31676 3 9606 Homo sapiens 0.04196107935126747 PYPNSEAAR Unmodified 1003.4723 0.47230849 3411 Q8TBT6;P08574 CYC1 Cytochrome c1, heme protein, mitochondrial yes no 0 0 0 4 0.816 1 1 1 33.271 33.34 2 0.00027882 6828 20230619_1883_Aki_TMTPro18x_K_F4 141.48 104.1 105450 51509 136470 147720 189090 219280 149940 163630 149200 81256 142470 150720 127350 127830 158920 72388 181100 129280 97496 48007 136920 141940 191170 214760 153490 168800 151500 88787 145970 149050 132110 129620 161750 77138 172700 122380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 198200000 20846 3411 19502 39485;39486;39487 31677;31678 31678 2 9606 Homo sapiens -0.02928877630347415 PYPVSPSDK Unmodified 988.48656 0.48656157 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;Q6P0M4;B4DVX2;Q7L4K8;Q9P1N9 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 6 0 1 44.252 44.344 2 0.00083402 11404 20230619_1886_Aki_TMTPro18x_K_F6 135.83 88.763 34588 20645 24965 28401 27094 29548 27208 23294 44811 39753 43468 75769 73490 68954 32856 109410 111670 132740 31855 18990 26209 28046 28037 29651 27958 24710 44618 40425 46137 75072 72277 73475 38902 110320 106230 125750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29359000 20847 1736 19503 39488 31679 31679 1 9606 Homo sapiens -0.00814225202043417 PYQCPVCQQR Unmodified 1334.586 0.58597481 3108 Q9UJ31;Q59GP8;I3L2Z5;Q8WZ46;Q8IUI2;P56270-3;P56270;P56270-2 A-328A3.4;MAZ Myc-associated zinc finger protein yes no 0 0 0 8 0 1 36.862 36.848 2 8.8504E-05 8174 20230619_1888_Aki_TMTPro18x_K_F8 143.61 136.4 14893 11266 14146 16766 15033 17008 18344 14481 26837 18145 18665 22486 22341 23104 14999 30306 30820 26201 13759 10361 14465 16471 15652 17117 18545 15085 26507 18305 19710 22661 22390 24162 16337 30062 29304 24946 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19783000 20848 3108 19504 39489 31680 31680 1 9606 Homo sapiens -0.06793473851257659 PYQYPALTPEQK Unmodified 1433.7191 0.7190807 3378 P04075;V9HWN7;J3KPS3;H3BQN4;H3BR04;H3BUH7;H3BMQ8 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 7.2 0.748 1 2 2 52.086 52.161 2;3 2.5155E-13 14509 20230619_1887_Aki_TMTPro18x_K_F7 169.65 146.43 317970 220280 288340 339190 296520 302800 320440 261120 292380 449550 465800 450180 446990 387260 394490 517500 431000 446470 293510 202740 295760 332060 307740 308020 320920 274990 306970 444010 468800 454910 454270 408290 404790 513620 412130 424760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3706299999.9999995 20849 3378 19505 39490;39491;39492;39493;39494 31681;31682 31681 2 9606 Homo sapiens 0.019569920778849337 PYQYPALTPEQKK Unmodified 1561.814 0.81404372 3378 P04075;V9HWN7;J3KPS3;H3BQN4;H3BR04;H3BUH7;H3BMQ8 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 1 2 0 1 48.498 48.563 3 0.00035123 13769 20230619_1881_Aki_TMTPro18x_K_F2 99.941 84.176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20850 3378 19506 39495 31683 31683 1 9606 Homo sapiens 0.055609255490708165 PYVEEGLHPQIIIR Unmodified 1662.9093 0.90934108 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;F8WAM2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 6.5 0.5 1 1 52.467 52.541 3 5.509200000000001E-29 14933 20230619_1886_Aki_TMTPro18x_K_F6 255.15 212.75 165820 124000 132880 142740 117860 164940 141850 149360 178310 191910 186140 268170 285000 256320 127580 420660 346860 419650 152990 113730 137590 142920 124680 164680 142820 154810 180090 194020 195280 268570 280640 273360 146260 419010 330260 398330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1084500000 20851 4005 19507 39496;39497 31684;31685 31684 2 9606 Homo sapiens 0.1044027874013409 QAAAHTDHLR Unmodified 1118.5581 0.5581038 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 0 0 4.5 0.5 1 1 23.012 23.079 3 2.6174E-05 3751 20230619_1883_Aki_TMTPro18x_K_F4 143.4 102.81 34028 23062 34357 42355 52528 47960 47231 56254 42321 34572 52057 56964 41762 35457 44916 30469 57433 51126 31433 21279 35188 41229 52876 48246 47802 56296 43733 36747 52547 56059 43105 37034 46223 31904 54787 48364 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37629000 20852 3954 19508 39498;39499 31686 31686 1 9606 Homo sapiens 0.003567072751820888 QAADFAEQFR Unmodified 1181.5465 0.54653606 4360 Q96HQ2-2;Q96HQ2 CDKN2AIPNL CDKN2AIP N-terminal-like protein yes no 0 0 0 4 0 1 49.623 49.658 2 0.00050963 13826 20230619_1883_Aki_TMTPro18x_K_F4 145.23 118.37 104230 78181 83796 104430 84684 104170 100900 98319 113080 118470 109970 111280 135820 104690 99562 132820 128680 125220 96173 71813 86976 103260 88471 105190 101170 101410 114460 118430 114080 113080 136030 109750 103670 132500 122810 119030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92387000 20853 4360 19509 39500 31687 31687 1 9606 Homo sapiens -0.03697534538810032 QAAEAHPPVGR Unmodified 1131.5785 0.57850489 3977 Q68DW7;Q4LE48;Q8WVM7-2;Q8WVM7;B4E2Q7;H7C595 DKFZp781D1416;STAG1 variant protein;STAG1 Cohesin subunit SA-1 yes no 0 0 0 3.5 0.5 1 1 27.384 27.481 3 0.02124 4736 20230619_1883_Aki_TMTPro18x_K_F4 59.975 37.929 4285.4 2385.2 4559.1 5528.4 5892.4 5417.5 7080.2 5677.6 7572.9 4731.3 4862.6 5663.9 6191.8 5088.7 5848.9 5389.8 8582.1 5513.1 3956.8 2211.5 4635.1 5316.5 6035.9 5489.4 7076.9 5762.9 7570.8 4866.4 5182.2 5686.6 6265 5284.3 6099.9 5420.8 8163.6 5246.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5740900 20854 3977 19510 39501;39502 31688 31688 1 9606 Homo sapiens 0.01797877934995995 QAAECHPPVGR Unmodified 1220.572 0.57203931 1775 A0A8I5KVF8;Q6MZM4;Q6MZP3;Q8N3U4;Q8N3U4-2;B2R8Y6;Q6MZM3;B1AMT4;B4DQ46 DKFZp686P16143;DKFZp686I05169;STAG2;DKFZp686C21148 Cohesin subunit SA-2 yes no 0 0 0 3.83 0.687 2 3 1 25.717 25.816 3 2.4937E-06 3852 20230619_1883_Aki_TMTPro18x_K_F4 150.09 132.28 63477 43010 54903 60143 71398 80738 74312 65490 80109 70590 86432 83639 84467 67962 75427 69616 95239 91023 58546 39545 56776 59567 72967 79706 74907 68115 81378 71494 88272 83779 85826 70581 77913 71150 90903 86242 3 4 4 4 4 4 4 4 3 4 4 4 4 3 4 4 4 4 61733000 20855 1775 19511 39503;39504;39505;39506;39507;39508 31689;31690;31691;31692;31693 31690 5 9606 Homo sapiens -0.029423832880411283 QAALEEEQAR Unmodified 1143.552 0.55201537 348 B5BU72;A0A024R5L7;A8K5U9;A0A024R5P1;Q13492-3;Q13492-2;Q13492-5;Q13492;Q13492-4;H0YCY1 PICALM Phosphatidylinositol-binding clathrin assembly protein no no 0 0 0 1 0 1 34.892 34.892 2 9.3291E-07 7940 20230619_1880_Aki_TMTPro18x_K_F1 180.67 151.51 61846 30928 68818 78105 73592 91155 65590 68981 75527 70395 86996 89786 98241 73653 76831 49687 102890 97930 57102 28741 69457 75044 75922 90559 66955 72062 76834 71679 89206 89637 98830 75358 79776 53110 98159 92522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59520000 20856 348 19512 39509 31694 31694 1 9606 Homo sapiens -0.01401855747008085 QAANLQDCYR Unmodified 1237.551 0.55096951 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;B4DN49;V9H023;V9H0D5;B4DL39;B4DSB9;Q0ZAJ1 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 5 0 1 37.7 37.792 2 1.9691E-13 8596 20230619_1885_Aki_TMTPro18x_K_F5 220.39 194.01 102870 78405 89389 86981 88086 112280 92618 95154 111310 91573 89028 82675 97255 75146 83396 105960 112440 82950 94975 71881 91901 87498 91904 111200 93718 98271 111420 92523 92700 84150 98336 79400 86761 104640 107100 79138 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114110000 20857 3585 19513 39510 31695 31695 1 9606 Homo sapiens -0.05830393387577715 QAAPCVLFFDELDSIAK Unmodified 1922.9448 0.94479989 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;Q9NTC4;Q9HAP0 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 6.5 0.5 1 1 65.884 65.918 4 0.032802 20501 20230619_1887_Aki_TMTPro18x_K_F7 49.463 39.883 9199.2 8335.7 10867 10766 9990.2 10620 9903.9 9709.4 10934 11826 8909.8 9135.4 11175 12702 13232 12174 9416.4 12951 8524.7 7648.6 10884 10671 10437 10731 10027 10040 11016 11762 9346 9515.4 11450 12948 13204 12291 9070.9 12280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54426000 20858 3656 19514 39511;39512 31696 31696 1 9606 Homo sapiens 0.020245284149723375 QAASGLVGQENAR Unmodified 1299.6531 0.6531264 1442 B5BUB1;A0A384MTR5;Q9Y265;Q9Y265-2 RUVBL1 RuvB-like 1 yes no 0 0 0 4.5 0.5 1 1 36.462 36.53 2 2.0479E-27 8094 20230619_1885_Aki_TMTPro18x_K_F5 247.13 210.69 98784 69894 85677 97529 112150 114810 107620 101090 140580 114790 127310 131340 141650 105790 113840 119210 150900 129550 91165 64248 88585 96403 114290 114480 109740 104620 140760 115840 131860 131680 142730 110760 118300 120160 143870 123020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142490000 20859 1442 19515 39513;39514 31697;31698 31698 2 9606 Homo sapiens 0.015285959557104434 QAASPLEPK Unmodified 939.50255 0.50254598 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;Q14980-5;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 6 0 1 41.654 41.748 2 4.4215E-08 10261 20230619_1886_Aki_TMTPro18x_K_F6 201.21 177.66 62891 45825 58580 69838 76988 82297 75553 71040 99766 68723 87294 89633 84064 71829 72511 68891 96907 85178 58081 42162 60213 68664 78501 81991 76971 73320 99643 70286 90004 89420 85379 74532 75254 70212 92403 80773 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129930000 20860 349;3906 19516 39515 31699 31699 1 9606 Homo sapiens 0.030374810348462233 QAASSLQQASLK Unmodified 1230.6568 0.65681479 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 4.5 3.5 1 1 44.603 44.612 2;3 4.2923E-14 12144 20230619_1880_Aki_TMTPro18x_K_F1 261.29 191.86 185360 141950 167320 187550 211620 222650 196090 202880 271920 160150 180500 161600 167630 135400 201430 182330 208540 154960 171190 130360 172240 186060 215980 222020 200890 207470 268720 164420 188860 163270 173120 143000 204500 181020 199090 147670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 241730000 20861 1488 19517 39516;39517 31700;31701 31700 2 9606 Homo sapiens 0.05071265729543484 QAASTSGPTPAASQALNPQAQK Unmodified 2123.0607 0.060709362 4306 Q92793-2;Q92793;Q712H6 CREBBP;MOZ/CBP CREB-binding protein yes no 0 0 0 8 0 1 43.934 43.952 3 1.7334E-08 11069 20230619_1888_Aki_TMTPro18x_K_F8 111.57 97.26 8599.9 8456.9 10359 10461 10547 8654.3 10663 9458.2 13791 9163.4 6655.7 7693.9 8822.9 7488.3 6888.3 9328.9 7948.3 6906.2 7975.6 7754.3 10376 10379 10920 8916.8 10836 9606.5 13583 9242.3 7265.4 7867.2 8848.7 7826 7110 9203.8 7587.4 6589 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13695000 20862 4306 19518 39518 31702 31702 1 9606 Homo sapiens 0.044101435194079386 QAATHTNIIALQR Unmodified 1435.7896 0.7895603 4093 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 2 0 1 38.576 38.642 3 8.4015E-08 9193 20230619_1881_Aki_TMTPro18x_K_F2 149.02 120.92 29144 25585 30762 27315 34781 39486 38702 37697 49580 40539 48414 43013 45178 35200 43499 48068 52761 49468 26974 23436 31162 27624 35933 38968 39123 38695 49802 40912 49547 43327 46121 37265 44798 48159 50369 46982 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28975000 20863 4093 19519 39519 31703 31703 1 9606 Homo sapiens 0.08909710186230768 QACTPMFR Unmodified 1009.4474 0.44735606 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4;H0YIZ0;G3V2Y4 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 1.5 0.5 1 1 40.715 40.751 2 0.014429 10416 20230619_1880_Aki_TMTPro18x_K_F1 93.992 80.484 96908 72775 89195 88477 115480 120790 118740 112190 126670 116930 122750 122520 123210 110670 109070 134780 164970 136520 89503 66782 91646 88500 117910 119500 119750 115310 128440 118120 126140 123760 125170 115800 114370 135080 157110 129750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103570000 20864 657 19520 39520;39521 31704 31704 1 9606 Homo sapiens -0.056989720289038814 QADFEAHNILR Unmodified 1312.6524 0.65239812 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 5 0 1 43.096 43.177 3 2.4579E-12 10858 20230619_1885_Aki_TMTPro18x_K_F5 186.74 116.71 155930 125770 147870 154150 148540 184180 152550 170730 211250 176670 188840 152370 195950 163680 165000 172520 144970 153250 144110 115390 150940 153750 154630 183600 155460 175410 210900 177610 194810 156300 198220 168950 167270 172170 138960 145740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308200000 20865 1182 19521 39522 31705 31705 1 9606 Homo sapiens 0.008578013066426138 QADFVQTPITGIFGGHIR Unmodified 1956.0217 0.02174508 1642 A0A7G6J4N4;Q14694;Q14694-3;Q14694-2;H3BNA1 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 0 0 0 3 0 1 60.243 60.272 3 9.3578E-10 18503 20230619_1882_Aki_TMTPro18x_K_F3 136.36 73.47 26667 23168 26696 30344 26640 29244 28985 28373 30636 30327 33677 33809 36642 30012 28692 38752 35388 34479 24668 21265 27137 30034 27734 29635 29149 29111 31241 30651 34533 34053 36921 31541 29741 38534 33788 32797 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75560000 20866 1642 19522 39523 31706 31706 1 9606 Homo sapiens 0.08197507746285737 QADGAASAPTEEEEEVVK Unmodified 1858.8432 0.84323117 1390 A0A2X0TVY0;C9JME2;Q9Y4F1;Q9Y4F1-2;A0A1B0GV68 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 0 0 0 1 0 1 45.797 45.797 3 4.5522E-07 12624 20230619_1880_Aki_TMTPro18x_K_F1 116.6 100.3 21973 17740 18246 19155 19296 20319 17246 17711 19004 28246 31375 26089 31060 25795 26289 33417 30112 27670 20287 16257 18860 19250 19910 20413 17583 18553 19790 27905 31553 26600 31474 27017 27067 33118 28757 26351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62041000 20867 1390 19523 39524 31707 31707 1 9606 Homo sapiens -0.05183671473901086 QADHEAEAGESLEPGRR Unmodified 1850.8507 0.85071659 1016 A0A0D9SEN2 CDK11B yes yes 0 0 1 2 0 1 30.626 30.691 3 0.085097 5971 20230619_1881_Aki_TMTPro18x_K_F2 38.376 21.157 5563.6 3990.7 3547.3 4908.6 4936.5 4150.2 5056.9 3649.2 3644.3 6363 4808.3 6228.5 5777.4 4743.8 6130.5 6448.6 5562.7 6377.9 5125.1 3663.2 3798.7 4869.7 5011.6 4248.1 5045.2 3841.5 3855.5 6275.4 4934.4 6270.6 5880.1 5033.5 6198.4 6447.9 5333.5 6055.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12422000 20868 1016 19524 39525 31708 31708 1 9606 Homo sapiens -0.040674743629779186 QADIIGKPSR Unmodified 1083.6037 0.60365701 1964 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 0 0 1 4.5 3.5 1 1 39.441 39.436 3 0.018967 9834 20230619_1880_Aki_TMTPro18x_K_F1 66.023 47.243 157330 114810 159820 151250 173600 192560 186010 185060 197450 195280 218040 205480 212080 174170 227020 205690 240040 185870 145400 105450 162320 150310 179540 191380 187220 189800 201310 197100 222460 207130 217310 182340 231160 205190 229170 176950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105250000 20869 1964 19525 39526;39527 31709;31710 31709 2 9606 Homo sapiens 0.06519932737569434 QADLYISEGLHPR Unmodified 1497.7576 0.75759147 765;4294 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;Q92526;Q92526-3 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 no no 0 0 0 5 0.816 1 1 1 46.834 46.902 3 2.0255E-21 12405 20230619_1885_Aki_TMTPro18x_K_F5 227.63 193.76 158620 134180 152630 162130 168180 181980 177510 170990 200600 188580 193610 194700 197540 180730 194290 189450 219420 220410 146660 123070 155830 161710 173710 182290 179150 175930 202780 189880 199180 196870 201440 187360 198980 192000 209700 209020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1081700000 20870 765;4294 19526 39528;39529;39530 31711;31712;31713 31713 3 9606 Homo sapiens 0.0286229771240869 QADNPHVALYQAR Unmodified 1481.7375 0.73752473 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;K7EQK2;B3KXH0;A0A8Q3SHG4;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2;B7Z602;A0A024R3G0;J3KTF1;J3QL06;B7Z4E6;A0A8Q3SHP7;A0A0G2JRG7;A0A0G2JRT9;Q9BST8 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 6 0.816 1 1 1 36.934 37.009 3 1.6427E-15 8373 20230619_1886_Aki_TMTPro18x_K_F6 197.36 170.26 121050 93136 124630 130970 131670 164950 156520 161670 190780 143810 138100 162960 183800 144460 158630 183920 182700 162950 111920 85590 126500 129580 137060 164030 157400 164870 190230 146970 146350 163950 184920 151710 163200 182950 174430 155070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 925790000 20871 874 19527 39531;39532;39533 31714;31715;31716 31715 3 9606 Homo sapiens 0.01592546772485548 QADSDIPLDR Unmodified 1128.5411 0.54111633 3136 Q14197;J3KS15 ICT1 Peptidyl-tRNA hydrolase ICT1, mitochondrial yes no 0 0 0 1.5 0.5 1 1 41.199 41.237 2 4.2658E-05 10616 20230619_1880_Aki_TMTPro18x_K_F1 148.73 125.3 57427 45660 63257 75239 84642 90081 84842 86378 99210 81008 95477 87740 101150 78270 76141 92843 101250 92208 53137 42038 64176 73685 86198 89837 85959 88345 100050 82397 98297 88508 101830 81853 79338 92984 96573 87619 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135570000 20872 3136 19528 39534;39535 31717 31717 1 9606 Homo sapiens -0.018012581213042722 QADSVEQAVYYCK Unmodified 1559.6926 0.69260795 1600 Q6DHZ8;B2RBM8;A0A669KBJ7;Q9H2P0 ADNP Activity-dependent neuroprotector homeobox protein yes no 0 0 0 4.5 0.5 1 1 50.915 50.968 3 0.015632 14480 20230619_1883_Aki_TMTPro18x_K_F4 62.042 48.136 39757 28211 36244 37126 38189 45537 37526 40136 54686 42992 44967 47531 48846 39230 45134 45479 53649 52381 36705 25915 37145 36866 39565 45270 38410 41443 54324 43463 46776 47754 49551 41092 46430 45988 51239 49683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170330000 20873 1600 19529 39536;39537 31718 31718 1 9606 Homo sapiens -0.0648506487573286 QADVFPDRDHFGR Unmodified 1558.7277 0.72768832 1223 Q9HCC0;Q9HCC0-2;A0A804HLJ9;A0A140VK29;A0A804HKE8;A0A804HJ24;A0A804HK37;A0A804HJ84;A0A804HJ31;A0A804HL02;A0A804HHS4;D6RDF7;A0A0S2Z5R4;A0A804HIH3;A0A804HJW5;D6R9R1;A0A0D9SFE9;A0A804HJW2;B3KR24;A0A0G2JM88 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 1 4.5 0.5 1 1 39.858 39.924 4 2.1868E-15 9510 20230619_1883_Aki_TMTPro18x_K_F4 176.08 146.28 53236 45371 57292 51853 65095 74605 68022 61587 81952 54756 61683 53929 61407 51764 54937 57654 64707 59301 49269 41590 57956 52147 67101 73412 68815 63634 81799 55756 64171 54756 62388 53789 56528 57933 61780 56327 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73670000 20874 1223 19530 39538;39539 31719;31720 31719 2 9606 Homo sapiens -0.029326412329282903 QADVNLVNAK Unmodified 1070.572 0.57202253 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;Q9UMY2;Q8N5M8;Q9UMY3 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 5.86 0.833 3 2 2 45.927 46.01 2;3 1.1736E-06 12073 20230619_1885_Aki_TMTPro18x_K_F5 135.86 91.541 353660 276810 366840 344070 387800 446460 337100 366030 421190 369170 579700 751230 487940 451630 662100 521380 654300 694290 327030 254030 371680 343310 400060 441790 345810 379700 430130 384450 584780 734630 509380 479150 668990 532940 626380 657460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1444700000 20875 1334 19531 39540;39541;39542;39543;39544;39545;39546 31721;31722;31723 31721 3 9606 Homo sapiens 0.039559399836207376 QADVPAAVTAAAATTPAAEDAAAK Unmodified 2181.0913 0.091340788 3467 Q5U058;P17677;P17677-2 GAP43 Neuromodulin yes no 0 0 0 4.2 0.748 1 2 2 55.013 55.054 3;4 6.6908E-09 16192 20230619_1883_Aki_TMTPro18x_K_F4 114.35 103.41 350530 319830 359660 397440 399790 478860 408600 394070 492100 358820 370610 355510 365220 316000 415040 375180 384360 410280 324430 293340 365480 395950 412700 475990 413970 407570 491380 364770 385780 359850 375350 330460 419260 378170 368220 389220 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 454150000 20876 3467 19532 39547;39548;39549;39550;39551 31724;31725;31726 31724 3 9606 Homo sapiens 0.048038771137726144 QADYVPSDQDLLR Unmodified 1518.7314 0.7314363 1073 A0A0S2Z3H8;A0A7I2V5R6;Q5JWF2;Q5JWF2-2;P63092-4;P63092-3;P63092;P63092-2;Q5JWE9;A0A0S2Z3S5;Q14455;A0A590UJQ9;A0A590UK28;Q5FWY2;A0A804HIH4;B0AZR9;A0A0A0MR13;A0A590UJF0;A0A590UJS2;A0A590UJY2 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short yes no 0 0 0 2.5 0.5 1 1 51.282 51.34 2 2.5007E-29 14718 20230619_1882_Aki_TMTPro18x_K_F3 267.02 229.95 201820 166270 183720 187360 175170 187350 199090 212600 205800 239420 223060 227140 271980 193020 192310 284240 236900 232060 186480 152410 188020 187590 183240 190100 199660 216100 210220 240020 230140 230070 272010 205160 199930 280970 226200 220980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 446510000 20877 1073 19533 39552;39553 31727;31728 31728 2 9606 Homo sapiens -0.007180162496979392 QAEDCITR Unmodified 991.43929 0.4392938 277 Q6FHH6;Q53TN2;B2R602;A0A024R3Z5;O43813;E9PHS0 LANCL1 LanC-like protein 1 yes no 0 0 0 1.5 0.5 1 1 32.229 32.259 2 0.0017836 6592 20230619_1881_Aki_TMTPro18x_K_F2 137.14 100.74 51750 28674 62931 65870 90260 99463 77611 86105 77887 54122 78476 99591 67515 72188 90657 31674 95413 100130 47841 26582 63432 63820 91203 97628 79019 88008 79258 57812 80212 97961 70456 73233 91705 36509 91277 94365 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51102000 20878 277 19534 39554;39555 31729;31730 31730 2 9606 Homo sapiens -0.05676827744696311 QAEDQVLR Unmodified 957.48796 0.48795855 1293 A0A1S5UZH2;Q8TDZ2;Q8TDZ2-4;Q8TDZ2-2;H0UI45;Q6ZMJ8;Q8TDZ2-3 MICAL1;FLJ00407 Protein-methionine sulfoxide oxidase MICAL1 yes no 0 0 0 2 0 1 35.743 35.8 2 0.042814 7991 20230619_1881_Aki_TMTPro18x_K_F2 73.573 51.081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20879 1293 19535 39556 31731 31731 1 9606 Homo sapiens 0.007514088867196733 QAEEEDEHLER Unmodified 1383.5903 0.59025137 1221 A8K930;A0A140VK17;Q8NDI1-3;Q8NDI1-2;Q8NDI1;B3KM32 EHBP1 EH domain-binding protein 1 yes no 0 0 0 1 0 1 30.484 30.484 3 2.5972E-09 6174 20230619_1880_Aki_TMTPro18x_K_F1 158.25 138.65 21644 11988 22636 27118 27120 34531 27301 29281 33283 28995 35060 34079 32145 28439 28873 19365 37056 36424 19981 11110 23014 26199 27861 34190 27706 30263 33617 29483 35748 34148 32755 29064 29813 20595 35371 34417 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24676000 20880 1221 19536 39557 31732 31732 1 9606 Homo sapiens -0.0862001462301123 QAEETYENIPGQSK Unmodified 1592.7318 0.73183023 782 O00410-3;O00410;A0A024RDY0;B4E0R6;E7EQT5;E7ETV3;E7EV12;E7EX05;C9J875;E7EWK4;E7ESZ1;E7ETV8;C9JZD8;C9JQT6;C9JXE0 IPO5;RANBP5 Importin-5 yes no 0 0 0 2.5 0.5 1 1 44.832 44.909 3 4.5649E-05 12092 20230619_1881_Aki_TMTPro18x_K_F2 79.337 68.078 221230 176860 194810 208290 214790 230180 212060 219060 271350 289220 286300 283950 296100 271270 236840 343810 338720 329820 204330 162210 200450 208080 221560 230910 215860 226390 273840 288390 293360 288150 299320 283980 248090 343220 323040 313440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 601160000 20881 782 19537 39558;39559 31733;31734 31733 2 9606 Homo sapiens -0.040826413205422796 QAEILQESR Unmodified 1072.5513 0.55128709 2886 E5RIW3;Q6FGD7;E5RJD8;O75347;O75347-2 TBCA Tubulin-specific chaperone A yes no 0 0 0 2.5 0.5 1 1 39.46 39.522 2 0.00053437 9389 20230619_1882_Aki_TMTPro18x_K_F3 132.39 91.404 895830 723230 791300 814480 857660 889760 786210 777170 1047700 1059800 1155100 1187700 1252900 982260 870270 1411700 1484500 1287400 827480 663000 813440 816230 884020 891930 805240 809450 1057200 1060000 1183900 1193400 1257500 1042800 928490 1403100 1413100 1224800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1833699999.9999998 20882 2886 19538 39560;39561 31735;31736 31736 2 9606 Homo sapiens 0.017913496039454913 QAEIWLHK Unmodified 1023.5502 0.55016488 2870 E5KS95;P43897;P43897-2;C9JG32;C9JT21;F8VPA7;F8VS27;P43897-4;P43897-3 TSFM Elongation factor Ts, mitochondrial;Elongation factor Ts yes no 0 0 0 7.5 0.5 1 1 47.861 47.934 3 0.0084259 12659 20230619_1888_Aki_TMTPro18x_K_F8 75.294 46.551 131490 111990 126850 131360 133540 158690 159210 144200 154040 172070 145230 136900 185480 143680 133520 204420 221360 179910 121590 102680 129410 131440 138910 158050 158840 149060 157070 171340 151100 140910 185580 151270 141900 202840 210660 171290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214250000 20883 2870 19539 39562;39563 31737 31737 1 9606 Homo sapiens 0.039331800256945826 QAELEEGRPQHQEQLR Unmodified 1946.9559 0.95585036 2991 F8W785;O00461 GOLIM4 Golgi integral membrane protein 4 yes no 0 0 1 2 0.816 1 1 1 31.743 31.79 4 5.6997E-26 6390 20230619_1881_Aki_TMTPro18x_K_F2 238.83 213.51 17537 14642 14488 14836 20298 17776 20788 16891 24446 22563 30631 45038 32906 32647 23784 28456 37492 37239 16195 13409 15057 15015 20611 17754 21032 17490 24930 23182 31321 44219 33120 33833 25126 29148 35738 35278 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 233010000 20884 2991 19540 39564;39565;39566 31738;31739 31738 2 9606 Homo sapiens 0.02025066833471101 QAELVPATVNDYR Unmodified 1474.7416 0.74160705 3315 O75691 UTP20 Small subunit processome component 20 homolog yes yes 0 0 0 4 0 1 48.792 48.829 2 0.00029599 13433 20230619_1883_Aki_TMTPro18x_K_F4 107.85 64.334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20885 3315 19541 39567 31740 31740 1 9606 Homo sapiens 0.023225914754902988 QAEQLVFPLEK Unmodified 1300.7027 0.70270235 2653 B4E343;Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 0 0 0 6 0 1 60.111 60.173 3 0.00056392 18188 20230619_1886_Aki_TMTPro18x_K_F6 95.094 76.782 48918 36226 47026 48181 46151 49164 45063 52286 56436 58772 58127 53317 59835 51516 54718 61151 60986 69806 45192 33276 47912 47693 47987 49712 45890 53348 56948 58877 59597 54333 60778 53733 56116 61758 58352 66178 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42316000 20886 2653 19542 39568 31741 31741 1 9606 Homo sapiens 0.06437910911790823 QAESLSLTR Unmodified 1003.5298 0.52982336 1588 Q15154;Q15154-5;H0YBA1;D3DSQ0;A0A5H1ZRS1;B9EIS5;A2RUU9;Q15154-2;Q15154-4;A0A4W8VX11;E7EV93;Q15154-3;E9PGW9;E5RGQ4 PCM1 Pericentriolar material 1 protein yes no 0 0 0 4.5 0.5 1 1 40.397 40.462 2 0.00010965 9723 20230619_1885_Aki_TMTPro18x_K_F5 154.05 4.7844 92496 67836 76083 100750 98565 104760 92321 93037 115550 82670 107060 106410 91021 79420 84553 97310 116370 96035 85348 62392 79131 99010 100480 105330 94153 95624 115920 84883 109520 106070 93153 83723 87911 97399 110890 91302 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97535000 20887 1588 19543 39569;39570 31742 31742 1 9606 Homo sapiens 0.0281996457523519 QAFHMEQLK Unmodified 1130.5543 0.55426398 645 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 0 0 0 8 0 1 45.412 45.44 3 3.2356E-05 11661 20230619_1888_Aki_TMTPro18x_K_F8 129.16 74.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20888 645 19544 39571 31743 31743 1 9606 Homo sapiens -0.0057909854290301155 QAFPNTNR Unmodified 946.46208 0.46207815 3510 Q53YD7;P26641;P26641-2 EEF1G Elongation factor 1-gamma yes no 0 0 0 6 1.41 1 1 1 1 1 34.377 34.428 2 0.0042389 7389 20230619_1886_Aki_TMTPro18x_K_F6 117.04 84.195 227930 139850 201150 219120 250880 259140 234140 240830 288950 206530 230950 235960 248710 198870 222760 185120 299520 238610 210220 128820 207390 215170 256210 258510 238720 246380 288740 211620 240490 236870 252060 205770 230950 189390 285420 226290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1318400000 20889 3510 19545 39572;39573;39574;39575;39576 31744;31745;31746 31745 3 9606 Homo sapiens -0.0132944056491624 QAFQDQDDRR Unmodified 1277.5749 0.57487608 4621 Q9NXC2-2;Q9NXC2 GFOD1 Glucose-fructose oxidoreductase domain-containing protein 1 yes no 0 0 1 2 0 1 29.443 29.515 3 0.0021246 5549 20230619_1881_Aki_TMTPro18x_K_F2 78.513 62.941 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20890 4621 19546 39577 31747 31747 1 9606 Homo sapiens -0.052808366295494125 QAFTDVATGSLGQGLGAACGMAYTGK Unmodified 2531.1785 0.17845801 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;E9PFF2;A0A0S2Z5C0;F8W888 HEL107;TKT Transketolase yes no 0 0 0 3 0 1 62.042 62.071 4 1.3021E-13 19290 20230619_1882_Aki_TMTPro18x_K_F3 132.39 121.4 27818 24424 27950 27293 25448 31005 30437 29723 52933 39050 35848 40234 45860 37311 32470 39608 43128 47241 25735 22382 28344 27389 26831 31043 31077 30701 51941 39045 38029 40664 45856 38729 33880 40171 41190 44774 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44941000 20891 3523 19547 39578 31748 31748 1 9606 Homo sapiens -0.025884079984734853 QAGAEALSQAVAR Unmodified 1270.663 0.6629628 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 7 0 1 43.905 43.988 3 6.4839E-08 10888 20230619_1887_Aki_TMTPro18x_K_F7 153.81 122.62 32132 28135 32301 31851 36469 36192 35054 34636 46228 29713 30299 33934 33977 31543 37969 39444 35171 34109 29726 25786 32852 31931 37499 36250 35763 35365 45786 30458 32037 34189 34776 33009 38393 39212 33671 32457 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40967000 20892 2863 19548 39579 31749 31749 1 9606 Homo sapiens 0.03845783961082816 QAGDFHQVIIR Unmodified 1282.6782 0.67821894 606 H7C0X5;O75225;A0A024RA40;Q9H3G5;H7C218 CPVL Probable serine carboxypeptidase CPVL yes no 0 0 0 7 0 1 41.582 41.653 3 0.00095937 9945 20230619_1887_Aki_TMTPro18x_K_F7 91.245 70.915 100720 67456 80956 90544 111230 118190 119210 104040 138880 110750 126230 120050 135240 104830 113950 127040 144230 117500 92880 61996 84409 89871 113380 117090 120250 107470 139770 111930 130440 120990 136690 109840 117970 126750 137520 111800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45768000 20893 606 19549 39580 31750 31750 1 9606 Homo sapiens 0.04818695548942742 QAGEVTFADAHRPK Unmodified 1525.7637 0.76373948 393 A0A024R6D8;Q13243-3;Q13243;Q59EK7;Q86U32 SFRS5;SRSF5 Serine/arginine-rich splicing factor 5 yes no 0 0 1 7 0.816 1 1 1 37.363 37.402 4 2.525E-11 8511 20230619_1886_Aki_TMTPro18x_K_F6 176.4 142.22 294650 220520 245630 321170 279800 334440 317670 329540 378460 337050 319990 366570 380000 292960 293910 364940 390700 394670 271940 202760 254620 316040 289340 336880 319920 337210 379810 341150 333920 368150 381760 308600 306100 367010 372910 374530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 808280000 20894 393 19550 39581;39582;39583 31751;31752 31751 2 9606 Homo sapiens 0.021888159439413357 QAGEVTYADAHK Unmodified 1288.6048 0.60477922 1567;2085 A0A590UJK4;A0A590UK01;A0A590UJP7;Q59GY3;A8K588;A0A590UK80;Q13247-3;Q13247;V9HVZ0;A8K644;Q08170;A0A0D9SEM4;Q53F45;Q59EF5 SRSF6;HEL-S-91;SFRS4;SRSF4 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 4 no no 0 0 0 3.5 0.5 1 1 37.516 37.564 3 3.1384E-10 8576 20230619_1882_Aki_TMTPro18x_K_F3 187.97 163.18 546290 379450 485670 532980 669290 673440 652720 615690 761040 674150 743070 680650 777340 612350 615630 679960 839460 677460 504200 348850 501430 527260 679950 669010 662180 634510 768310 678650 764110 688560 784460 637730 641470 681970 799910 644080 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1372300000 20895 1567;2085 19551 39584;39585 31753;31754;31755 31753 3 9606 Homo sapiens -0.02797897684217787 QAGEVVCEAIK Unmodified 1202.5965 0.59652272 489 A0A024R830;A0A140VJL8;P29218;P29218-3;H0YBL1;E5RG94;E5RHE9;E5RI82;E5RGY4;P29218-2;E5RIF4;E5RG13 IMPA1 Inositol monophosphatase 1 yes no 0 0 0 4 0 1 48.781 48.819 3 0.0017741 13444 20230619_1883_Aki_TMTPro18x_K_F4 83.314 49.357 95150 80114 102550 93526 93277 119560 110070 97582 134770 78590 80459 86405 97012 68574 76262 101880 109780 91314 88055 73455 103390 93715 98213 118380 110720 100740 133560 80810 85857 86808 97475 73126 79894 101170 104580 86910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71873000 20896 489 19552 39586 31756 31756 1 9606 Homo sapiens 0.003328320748096303 QAGLVSK Unmodified 701.40719 0.40718903 1410 A0A384MDW7;P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial yes no 0 0 0 8 0 1 40.196 40.185 2 0.02501 9558 20230619_1888_Aki_TMTPro18x_K_F8 98.458 16.5 55607 32764 65305 72248 102810 98750 88528 113340 98398 56058 89098 101940 72632 78153 96941 46834 101980 86930 51403 30342 66131 70004 103290 98110 90428 113160 99130 61133 91273 100540 75927 79692 98134 49994 97420 82197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33999000 20897 1410 19553 39587 31757 31757 1 9606 Homo sapiens 0.044541726344732524 QAGPASVPLR Unmodified 994.55598 0.55597854 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DJ98;A0A8I5KYJ6;A0A8I5KXE2;A0A8I5KP58;A0A8I5QJM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 7.5 0.5 1 1 38.894 38.92 2 2.6435E-05 9048 20230619_1888_Aki_TMTPro18x_K_F8 173.75 120.58 307970 182160 229040 256660 260790 348910 303000 284230 460740 360750 368900 495150 405060 386610 358380 474330 518930 503660 283680 167610 239980 254140 270490 344090 307710 296940 456500 364860 385190 492520 410600 406740 374730 476540 494850 478130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 418800000 20898 2389 19554 39588;39589 31758;31759 31759 2 9606 Homo sapiens 0.05848278537371243 QAGPASVPLRTEEEFK Unmodified 1757.8948 0.89481323 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DJ98;A0A8I5KYJ6;A0A8I5KXE2;A0A8I5KP58;A0A8I5QJM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 1 5.5 0.5 1 1 47.652 47.731 3 4.0316E-07 12772 20230619_1885_Aki_TMTPro18x_K_F5 120.9 93.868 505100 438110 472560 505350 453830 546670 521080 543250 619150 652060 632290 699290 772350 655330 608130 873400 825900 928380 466980 401600 482720 505490 475240 549570 524680 558070 626140 654590 654570 706440 776270 689090 634790 876340 788820 880820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 579090000 20899 2389 19555 39590;39591 31760 31760 1 9606 Homo sapiens 0.046181618013179104 QAGPASVPLRTEEEFKK Unmodified 1885.9898 0.98977625 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DJ98;A0A8I5KYJ6;A0A8I5KXE2;A0A8I5KP58;A0A8I5QJM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 2 7.5 0.5 1 1 46.111 46.174 4 1.7278E-13 11771 20230619_1887_Aki_TMTPro18x_K_F7 160.97 146.55 577350 494000 524530 536510 528290 568410 576550 601020 639110 683920 695230 763060 775960 652110 665990 886840 784700 829250 533600 452620 537330 539060 549770 573350 580700 613890 650170 688960 714620 767420 784210 688620 686960 883510 749960 788070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 928870000 20900 2389 19556 39592;39593 31761;31762 31761 2 9606 Homo sapiens 0.08222095272503793 QAGSVGGLQWCGEPK Unmodified 1572.7355 0.73547582 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3;Q9BTE3-3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 0 8 0 1 51.744 51.821 3 0.0057332 14304 20230619_1888_Aki_TMTPro18x_K_F8 62.055 48.025 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20901 1140 19557 39594 31763 31763 1 9606 Homo sapiens -0.027982500276266364 QAGVAIGR Unmodified 770.43989 0.43988615 163 A0A024R1U2;Q7RTV0 PHF5A PHD finger-like domain-containing protein 5A yes no 0 0 0 7.5 0.5 1 1 34.372 34.406 2 0.035473 7251 20230619_1888_Aki_TMTPro18x_K_F8 75.189 24.153 98620 54092 111090 106740 142770 173370 123730 140530 136630 91697 146100 155590 130390 121020 131150 68866 167450 142150 91099 50019 112280 104230 145380 169330 126320 144460 138620 97303 148840 153780 133700 123240 134980 74372 159690 134330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127380000 20902 163 19558 39595;39596 31764 31764 1 9606 Homo sapiens 0.045483797573297124 QAGVFEPTIVK Unmodified 1187.655 0.65502388 3470 P17987;E7EQR6;F5H282 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 7 0.707 1 2 1 53.872 53.942 2;3 6.8729E-09 15205 20230619_1888_Aki_TMTPro18x_K_F8 186.87 128.91 344140 287980 318870 345890 322370 334920 333510 327980 357660 399610 403610 380150 455390 341460 368400 445830 427000 418510 318070 264130 326190 344450 334760 339480 336510 337530 365140 399340 413990 385640 458690 359230 379800 444590 407930 397830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2445400000 20903 3470 19559 39597;39598;39599;39600 31765;31766 31766 2 9606 Homo sapiens 0.06870256711590628 QAGVIYLK Unmodified 890.52255 0.52255314 3354 O95373 IPO7 Importin-7 yes yes 0 0 0 2 0.816 1 1 1 50.858 50.899 2 0.0042389 14823 20230619_1881_Aki_TMTPro18x_K_F2 126.67 90.472 222790 184620 201270 196290 207120 229410 224220 211160 255600 278950 284820 268180 337950 237340 243290 347410 315030 276550 205860 169140 206300 197820 215220 229150 226090 218790 259970 277950 292950 271890 338430 251790 253580 343070 300460 263560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 404330000 20904 3354 19560 39601;39602;39603 31767 31767 1 9606 Homo sapiens 0.07291276765465682 QAGVYHPNVK Unmodified 1111.5774 0.57744226 613 A0A090N7U2;A0A024RA81;X6RM59;Q9H0P0-3;Q9H0P0-2;Q9H0P0-1;Q9H0P0;B9A035 NT5C3;NT5C3A 5'-nucleotidase;Cytosolic 5'-nucleotidase 3A yes no 0 0 0 1 0 1 36.355 36.355 3 0.061248 8532 20230619_1880_Aki_TMTPro18x_K_F1 43.77 23.606 15975 10878 14567 17408 19266 24107 19225 19426 22496 19741 21189 23315 20163 18426 22936 18152 25210 22045 14745 10017 15008 17113 19668 23742 19484 20175 22674 20049 21779 23325 20755 19151 23370 18482 24077 20909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25555000 20905 613 19561 39604 31768 31768 1 9606 Homo sapiens 0.026116635660855536 QAHLCVLASNCDEPMYVK Oxidation (M) 2149.9595 0.95948045 3501 P25398 RPS12 40S ribosomal protein S12 yes yes 0 1 0 6.5 0.5 1 1 48.099 48.183 3 7.7842E-14 13121 20230619_1886_Aki_TMTPro18x_K_F6 152.32 136.38 128390 86902 143900 144710 170150 123130 163410 136840 126020 149500 151260 109530 133940 100760 169220 125120 108160 132290 118710 80073 145210 141070 173790 126580 164010 139290 131650 149110 153080 112820 138730 105640 167850 125880 104240 125490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 292110000 20906 3501 19562 39605;39606 31769;31770 31769 2168 2 9606 Homo sapiens -0.06950090770806128 QAHLCVLASNCDEPMYVK Unmodified 2133.9646 0.96456583 3501 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 0 7 0 1 51.134 51.211 3 2.1504E-09 14090 20230619_1887_Aki_TMTPro18x_K_F7 124.29 108.52 70018 46018 77308 65427 55624 65724 81780 70198 60338 67869 61936 50250 74131 52023 86006 62648 52331 60169 64720 42324 77541 64509 60134 66512 80296 71371 62795 68154 63993 51916 75712 54238 85262 62725 50450 57146 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 921030000 20907 3501 19562 39607 31771 31771 1 9606 Homo sapiens -0.05705786908220034 QAHLTNQYMQR Oxidation (M) 1404.6568 0.65683157 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;A0A024R9E2;H0YB86 PABPC1 Polyadenylate-binding protein 1;Polyadenylate-binding protein yes no 0 1 0 7.5 0.5 1 1 29.897 29.958 3 0.0013741 5654 20230619_1888_Aki_TMTPro18x_K_F8 83.182 65.046 10324 7170.3 8190.1 10511 14627 14627 10935 10794 10719 7841.7 6925.6 8989.6 9997.8 5899 10266 7290.2 13438 10039 9521.3 6595.4 8605.5 10383 14576 14390 11228 11214 10787 8123 7438.7 8961.1 10108 6276.8 10590 7465.8 12803 9518.4 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27985000 20908 566 19563 39608;39609 31772;31773 31773 334 2 9606 Homo sapiens -0.02931057542105009 QAHTMDPQLR Oxidation (M) 1211.5717 0.57170495 3606 P49327;A0A0U1RQF0;A0A0U1RRG3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 1 0 4.43 0.904 1 3 2 1 26.354 26.431 3 6.2276E-05 3794 20230619_1883_Aki_TMTPro18x_K_F4 133.42 101.58 421010 210730 387380 373810 368580 368090 394020 408150 458090 493890 599970 524180 551720 444380 463660 556260 614400 505050 388100 194650 395860 363940 384870 373450 398080 416460 468660 495320 606110 528430 560330 466940 481820 554100 585640 480640 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 972870000 20909 3606 19564 39610;39611;39612;39613;39614;39615;39616 31774;31775;31776;31777;31778 31775 2283 5 9606 Homo sapiens -0.025618030079158416 QAHTMDPQLR Unmodified 1195.5768 0.57679033 3606 P49327;A0A0U1RQF0;A0A0U1RRG3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 4.5 0.5 1 1 32.121 32.191 3 1.4854E-05 6365 20230619_1883_Aki_TMTPro18x_K_F4 145.46 107.44 133040 68607 126790 139250 155680 188830 151360 173320 200760 160770 189160 230370 203900 208180 164670 173670 306110 307700 122690 63491 129850 135320 159530 186630 154420 177720 201150 165360 195500 229780 206190 213680 175970 182530 291520 290830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 239540000 20910 3606 19564 39617;39618 31779;31780 31779 2 9606 Homo sapiens -0.013174991453070106 QAHVELAER Unmodified 1051.5411 0.54105675 294 A0A087WYJ2;A0A024R4F4;A0A2R8Y705;Q308M6;M0R2B7;P28340;M0QZR8;Q59FA0;M0QXE6;M0QXQ2 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit yes no 0 0 0 2.5 0.5 1 1 31.23 31.304 3 0.00011445 6240 20230619_1881_Aki_TMTPro18x_K_F2 120.63 86.098 54399 40219 53699 53941 65430 60415 65012 69879 75261 60651 73712 97991 73131 63771 68437 60802 75950 71401 50266 36947 54774 53444 66937 60834 65901 70483 75977 62906 75842 96510 74446 66721 70041 61785 72564 67722 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41956000 20911 294 19565 39619;39620 31781;31782 31781 2 9606 Homo sapiens 0.0173478666936262 QAIGIALETR Unmodified 1070.6084 0.60840804 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491;A0A7I2V4A5;H7BZR6;C9J9M4 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 6.5 0.5 1 1 49.193 49.274 2 1.6291E-06 13244 20230619_1887_Aki_TMTPro18x_K_F7 170.47 114.04 328450 260590 291930 332960 345510 370800 356910 348020 406560 389310 372430 382270 394250 340820 337530 422420 375500 397840 303370 239200 300650 330740 355000 371580 360680 358230 410130 391080 384710 386990 399060 357200 346800 421580 359060 378050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 687810000 20912 832 19566 39621;39622 31783 31783 1 9606 Homo sapiens 0.07592816880310238 QAILAAQR Unmodified 869.5083 0.50830006 3287 O60869-2;O60869-3;O60869 EDF1 Endothelial differentiation-related factor 1 yes no 0 0 0 1 0 1 38.085 38.085 2 0.0005698 9235 20230619_1880_Aki_TMTPro18x_K_F1 127.31 78.248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20913 3287 19567 39623 31784 31784 1 9606 Homo sapiens 0.06832624337187099 QAILHLER Unmodified 978.56106 0.56106391 1304 Q15477;A0A8V8TLC0;A0A1U9X8J0;A0A1U9X8J1;A0A1U9X8J2;A0A1U9X8J6;Q96BC0;O76046;Q9NPK3;A0A8V8TL97;H7C4L3;H7C5N0;A0A8V8TLA2;B4E0N1;B4DM01;A0A8V8TN04;A0A1U9X8I7;A0A024RCU1;A0A8V8TLR3 SKIV2L;SKI2W Helicase SKI2W yes no 0 0 0 6.5 0.5 1 1 40.066 40.144 3 0.00078101 9308 20230619_1887_Aki_TMTPro18x_K_F7 121.53 97.379 85821 67774 73364 79271 82337 83419 88444 83317 105480 75389 78134 72651 79280 68168 80005 81398 91441 73060 79244 62157 75725 79183 84970 84069 89314 84934 105310 76597 81481 73770 80946 71152 81972 81126 87252 69549 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47417000 20914 1304 19568 39624;39625 31785;31786 31786 2 9606 Homo sapiens 0.07092582400002811 QAIPIGLQNR Unmodified 1108.6353 0.63529149 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8;A0A8V8TQ76;A0A8V8TRI2;H0YI52 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 0 0 2 0 1 46.18 46.259 2 0.00025604 12716 20230619_1881_Aki_TMTPro18x_K_F2 135 76.081 114560 87657 95075 108310 117720 127810 128970 113900 154060 101600 107690 98317 106030 80809 113410 97285 125860 102630 105740 80445 98634 107920 120850 127440 130050 117040 153500 103360 112570 99402 108600 84867 115770 97854 120140 97510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88865000 20915 117 19569 39626 31787 31787 1 9606 Homo sapiens 0.08531925491524817 QAITQVVVSR Unmodified 1099.635 0.63495714 4537 Q9H9B4 SFXN1 Sideroflexin-1 yes yes 0 0 0 2 0 1 44.113 44.196 2 0.00035831 11766 20230619_1881_Aki_TMTPro18x_K_F2 139.15 102.18 203690 173520 199380 242630 244870 235370 259190 249600 287350 257880 264760 258280 315240 230810 257630 309560 287820 284280 188360 159390 203830 239170 250860 238920 261300 254300 290260 260230 274840 261410 317160 243300 264940 308250 275070 270290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197760000 20916 4537 19570 39627 31788 31788 1 9606 Homo sapiens 0.0891250577167284 QAIVNASR Unmodified 857.47191 0.47191456 561 O75131;A0A024R994 CPNE3 Copine-3 yes no 0 0 0 7.5 0.5 1 1 33.551 33.547 2 0.0019843 6713 20230619_1887_Aki_TMTPro18x_K_F7 111.17 82.639 33202 17159 42694 45363 58710 57072 41754 51164 52648 26512 48339 51290 38014 35139 42212 17307 54954 45801 30703 15958 42820 43584 59193 56642 43455 52007 52736 28901 49371 50366 39356 35848 43406 19360 52393 43234 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31496000 20917 561 19571 39628;39629 31789;31790 31789 2 9606 Homo sapiens 0.03747747440468174 QALAHGLK Unmodified 836.48684 0.48683634 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;A0A7I2V614;B4DEC3;Q71UF1;B4DW08;A0A7I2V538;O75944 ACO2;ACON Aconitate hydratase, mitochondrial yes no 0 0 0 1.5 0.5 1 1 38.19 38.222 3 0.0035001 9027 20230619_1881_Aki_TMTPro18x_K_F2 95.815 52.789 207220 152690 217610 236360 323690 351050 313420 300790 390780 190200 235840 226210 212510 215920 218370 195990 297220 241150 191570 140510 221950 233160 327560 344960 318730 307770 386840 199700 248210 227780 218330 221910 226140 199910 283220 228770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198570000 20918 1050 19572 39630;39631 31791 31791 1 9606 Homo sapiens 0.0620523930847412 QALAVMSCEVLR Unmodified 1375.6952 0.69519091 974 P57737-3;A0A0A6YYL4;P57737;P57737-4;P57737-2;B3KSY4;B3KUH7;B4DKU9;I3L167;B4E0F2;E7EP81;I3L212;I3L0X8 CORO7;CORO7-PAM16;hCG_1787779 Coronin-7;Coronin yes no 0 0 0 1 0 1 57.607 57.607 2 0.003115 17516 20230619_1880_Aki_TMTPro18x_K_F1 91.701 71.56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20919 974 19573 39632 31792 31792 1 9606 Homo sapiens 0.0223711204821484 QALAYLEQSYK Unmodified 1312.6663 0.66631685 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2;H3BPA9;H3BP95 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 8 0 1 59.193 59.235 3 7.466E-05 17463 20230619_1888_Aki_TMTPro18x_K_F8 123.67 84.888 52895 38897 49263 54016 49937 62331 54918 52373 60890 66692 58871 61192 71936 56013 54821 79280 68033 66028 48852 35747 50393 53392 52019 62142 55272 54580 61679 66470 61071 62207 72169 59189 56911 78479 64952 62862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48283000 20920 4222 19574 39633 31793 31793 1 9606 Homo sapiens 0.022490340150852717 QALCPGSTR Unmodified 988.47601 0.47601366 1584 A0A8Q3SIN5;D3DVA5;V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;B4DJ49;B7Z977 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 0 0 0 7.5 0.5 1 1 32.871 32.915 2 0.078304 6494 20230619_1887_Aki_TMTPro18x_K_F7 62.582 45.806 34141 8692.7 31919 19153 20865 23904 15800 19848 14477 14138 19664 23115 21069 15485 16970 12145 21061 17804 31417 8104.7 32349 18554 22426 23697 16246 20399 15033 14859 20014 22780 21245 16060 17524 12595 20089 16862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23364000 20921 1584 19575 39634;39635 31794 31794 1 9606 Homo sapiens -0.018685311281160466 QALEDLEK Unmodified 944.48148 0.48147619 3808;4492 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5;Q9H0B6;Q9H0B6-2;A8MZ87;A8MX29;E9PQ02 KLC1;KNS2;KLC2 Kinesin light chain 1;Kinesin light chain 2 no no 0 0 0 2.5 0.5 1 1 49.494 49.571 2 0.0038404 13936 20230619_1882_Aki_TMTPro18x_K_F3 132.38 39.726 121750 97180 112460 123840 110030 126210 134560 118970 158160 137420 136210 138730 147600 112560 120120 152440 150860 132120 112490 89198 115060 122890 115210 127270 134920 122600 158870 137980 141280 139900 148920 119110 124500 151330 143920 125780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124530000 20922 3808;4492 19576 39636;39637 31795;31796 31796 2 9606 Homo sapiens 0.007014709353256876 QALEGLGDLK Unmodified 1042.5659 0.56587452 1641;1343 P12081;P12081-4;E7ETE2;A0A6Q8PHA5;A0A6Q8PFF2;Q52NV4;P12081-2;P12081-3;A0A6Q8PF47;A0A6Q8PHE3;B4DDD8;B3KWE1;B4E1C5;A0A6Q8PF07;B4DEA2;B4DDN8;D6RB22;B4DQ67;A0A2R8Y6I1;A0A2R8Y3N3;B2R7G6;A0A2R8Y5P7;P49590-2;P49590;D6RJE6;B4DSY5 HARS;HRS;HARS2 Histidine--tRNA ligase, cytoplasmic;Probable histidine--tRNA ligase, mitochondrial no no 0 0 0 5.5 0.5 2 2 55.372 55.442 2;3 0.00025837 16191 20230619_1886_Aki_TMTPro18x_K_F6 115.29 60.223 146790 105040 125170 142620 123790 141820 156580 148250 153230 213670 220280 254520 275580 244290 162980 368360 355220 395180 135460 96517 129060 140910 129620 143600 155910 152800 159240 213580 225370 256370 274440 258880 179470 368950 338290 374920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 858910000 20923 1641;1343 19577 39638;39639;39640;39641 31797;31798 31798 2 9606 Homo sapiens 0.04629421752088092 QALETVNDYNPLMK Oxidation (M) 1650.7923 0.792322 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 0 7 0 1 56.935 56.991 3 4.3475E-07 16593 20230619_1887_Aki_TMTPro18x_K_F7 134.24 109.39 44752 36199 43687 47713 42951 45924 48077 44594 52822 53088 56950 58695 64369 50888 58608 62559 59837 66275 41370 33236 44478 47209 44799 46548 48331 45902 53720 53368 58577 59073 65154 53389 59789 62875 57285 62886 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127150000 20924 3881 19578 39642 31799 31799 2556 1 9606 Homo sapiens -0.0070424726179680874 QALGELQAR Unmodified 984.53524 0.53524309 4254 Q8NFF5-2;Q8NFF5;Q8NFF5-3;Q5T190 FLAD1 FAD synthase;Molybdenum cofactor biosynthesis protein-like region;FAD synthase region yes no 0 0 0 5 0 1 41.426 41.511 2 0.0008186 10182 20230619_1885_Aki_TMTPro18x_K_F5 122.28 63.466 72382 53847 68197 75554 88079 81777 83958 84635 101490 78182 89888 94008 83975 74719 81221 87607 100470 91223 66860 49490 69951 74582 89713 82306 85419 86100 101860 79869 92541 94066 85813 78368 83733 88020 95880 86640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51731000 20925 4254 19579 39643 31800 31800 1 9606 Homo sapiens 0.04235688157723416 QALHSGQNQLK Unmodified 1222.6418 0.64183343 3654 P54886-2;P54886;A0A2Z4QJC8 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 1 0 1 34.562 34.562 3 1.4112E-12 7792 20230619_1880_Aki_TMTPro18x_K_F1 206.36 148.23 52674 25893 56092 54707 82317 78204 64666 68689 76898 57438 73450 80053 79875 58682 70476 42010 85906 70306 48611 23985 57063 53135 82861 77050 66612 70509 77464 59365 75844 79443 80815 60427 72507 44172 81937 66534 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189110000 20926 3654 19580 39644 31801 31801 1 9606 Homo sapiens 0.03941818652242546 QALLQYK Unmodified 862.49125 0.49125301 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 2.5 0.5 1 1 49.736 49.803 3 0.026521 14322 20230619_1881_Aki_TMTPro18x_K_F2 70.912 1.7147 157930 144290 140970 135820 167190 196190 168190 162790 238240 85957 77860 71902 101850 77734 101670 102090 98833 78882 146010 132010 145000 138760 171880 193070 171530 166530 231900 90921 88463 73972 103210 81300 103230 100910 94452 75242 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 365760000 20927 3789 19581 39645;39646 31802 31802 1 9606 Homo sapiens 0.05450703731366957 QALLTQHYR Unmodified 1128.604 0.60399136 3968;2412 B3KTC8;B7ZKJ7;Q8TEI1;Q3KQV9;Q3KQV9-2 UAP1L1;FLJ00216 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 no no 0 0 0 2.5 0.5 1 1 37.528 37.585 3 0.023805 8725 20230619_1881_Aki_TMTPro18x_K_F2 51.436 20.064 134910 101560 112730 123560 118190 131570 131530 125990 142570 150110 158170 168750 183370 170550 156400 180980 182500 182210 124520 93197 116510 123090 122750 132320 132200 129770 145310 151000 162720 170520 185180 176340 161090 181720 174360 173050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36583000 20928 2412;3968 19582 39647;39648 31803 31803 1 9606 Homo sapiens 0.04483352457418732 QALNSVVK Unmodified 857.49707 0.49706667 4600 Q9NUY8-2;Q9NUY8;B3KS68;E9PGE5 TBC1D23 TBC1 domain family member 23 yes no 0 0 0 1 0 1 44.537 44.537 2 0.046107 12090 20230619_1880_Aki_TMTPro18x_K_F1 72.23 33.267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20929 4600 19583 39649 31804 31804 1 9606 Homo sapiens 0.06261802243045622 QALPQVR Unmodified 810.47119 0.47118627 2180 Q99829;B0QZ18;F2Z2V0;A6PVH9;E7ENH5;Q59EI4;Q5JX45;H0Y524 CPNE1 Copine-1 yes no 0 0 0 7.5 0.5 1 1 37.691 37.716 2 0.025043 8542 20230619_1888_Aki_TMTPro18x_K_F8 98.415 28.983 165580 127040 151060 154530 199360 205720 181870 182470 238440 204650 245420 260110 234550 204280 233500 223500 283460 251820 152930 116570 155390 154480 202800 203650 186120 188590 239860 207400 251100 259580 239770 213560 240140 225930 270510 238990 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 116340000 20930 2180 19584 39650;39651 31805 31805 1 9606 Homo sapiens 0.05836952791423755 QALQDTLALYK Unmodified 1262.6871 0.68705229 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 2 2 59.89 59.896 2;3 8.9271E-07 18464 20230619_1880_Aki_TMTPro18x_K_F1 190.86 110.42 153040 124930 137750 147890 138060 170790 166790 171260 197500 146460 140620 127860 155470 123330 156510 174860 150460 152070 141390 114570 141300 147790 144360 170930 167420 174220 197060 148880 147560 130650 158220 130120 158900 173560 144030 144680 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 508960000 20931 2337;3778;3779 19585 39652;39653;39654;39655 31806;31807;31808;31809 31807 4 9606 Homo sapiens 0.06621624394733772 QALSGFGYR Unmodified 997.49813 0.49812931 3297 Q53FC3;O75340;A0A024QZ42 PDCD6 Programmed cell death protein 6 yes no 0 0 0 3 0 1 46.673 46.751 2 7.8413E-07 12654 20230619_1882_Aki_TMTPro18x_K_F3 146.79 116.98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20932 3297 19586 39656 31810 31810 1 9606 Homo sapiens -0.0007198338804528248 QANCPLYVTK Unmodified 1192.591 0.59104341 2811 O14531;D3DRG7;Q5T0Q6 DPYSL4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 1 0 1 46.566 46.566 3 0.06952 12938 20230619_1880_Aki_TMTPro18x_K_F1 44.299 26.163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20933 2811 19587 39657 31811 31811 1 9606 Homo sapiens 0.0024515328298093664 QAPDNEITIK Unmodified 1127.5823 0.58225287 4620 Q9NX58;A8K3Y5 LYAR Cell growth-regulating nucleolar protein yes no 0 0 0 4 0 1 46.064 46.107 3 0.0082916 12215 20230619_1883_Aki_TMTPro18x_K_F4 69.672 43.629 92159 71283 87140 96396 106110 115100 97309 99777 127690 112190 121350 108730 133460 96930 113290 125490 119560 121550 85149 65478 89270 95493 108530 114610 99571 103310 128100 112660 125220 110210 134750 101970 115970 125390 114340 115480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50807000 20934 4620 19588 39658 31812 31812 1 9606 Homo sapiens 0.023565029181781938 QAPEPLRAEAR Unmodified 1236.6575 0.65748349 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 1 4 0 1 33.444 33.498 3 0.015204 6902 20230619_1883_Aki_TMTPro18x_K_F4 63.164 29.278 43118 36803 45953 42233 59484 57842 66747 73466 72156 62234 68759 67802 66446 51646 64701 66694 75405 62414 39902 33737 46633 42452 60831 57678 67040 73612 73030 63644 70606 68054 67786 54613 66419 66540 71954 59374 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80860000 20935 2830 19589 39659 31813 31813 1 9606 Homo sapiens 0.04862105169240749 QAPPPPPPSR Unmodified 1042.556 0.55597854 1930 A4D0Y1;A8K180;O00401 WASL Neural Wiskott-Aldrich syndrome protein yes no 0 0 0 6 0 1 31.739 31.773 2 0.022209 6428 20230619_1886_Aki_TMTPro18x_K_F6 74.92 50.765 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20936 1930 19590 39660 31814 31814 1 9606 Homo sapiens 0.036402785373638835 QAPQPQSSLQR Unmodified 1238.6367 0.63674805 1158 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A1B0GW07 GATAD2B Transcriptional repressor p66-beta yes no 0 0 0 6.5 0.5 1 1 33.901 33.965 2 0.0001437 6857 20230619_1887_Aki_TMTPro18x_K_F7 157.99 98.644 25296 16328 25030 25655 28779 33252 26015 30574 37074 22679 28238 28246 33043 22948 27745 21160 33289 26055 23358 15037 25507 25229 29556 32965 26741 31194 36745 23539 29592 28241 33291 23780 28569 21593 31747 24722 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35665000 20937 1158 19591 39661;39662 31815;31816 31816 2 9606 Homo sapiens 0.026975147896109775 QAQAAVLAVLPR Unmodified 1235.735 0.73500553 3090 Q6IB29;H7C2Q8;Q99848 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 0 0 0 4 0 1 56.506 56.511 3 0.0001197 16902 20230619_1883_Aki_TMTPro18x_K_F4 108.53 92.986 30449 27256 28290 29558 22239 26840 28439 26913 36788 28942 29755 29891 34303 28925 34636 37840 35634 38837 28155 24968 28836 29640 23782 27356 28574 27559 36700 29192 31067 30289 34886 30345 35288 37926 34107 36865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68697000 20938 3090 19592 39663 31817 31817 1 9606 Homo sapiens 0.12656743105435453 QAQENLHDQVQEQK Unmodified 1693.802 0.80197548 2108 A8K7J3;Q15075 EEA1 Early endosome antigen 1 yes no 0 0 0 2.5 0.5 1 1 35.852 35.908 3 3.5826E-07 7932 20230619_1882_Aki_TMTPro18x_K_F3 138.55 125.43 13698 9751.3 14470 13838 19185 18896 20397 22838 27017 20942 21981 24030 27045 18701 18814 19895 28019 23593 12662 8965.1 14704 13710 19576 18812 20694 22990 26935 21363 23014 24061 27031 19553 19786 20179 26689 22386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41177000 20939 2108 19593 39664;39665 31818 31818 1 9606 Homo sapiens -0.01717342932079191 QAQIEVVPSASALIIK Unmodified 1665.9665 0.96652161 3530 P30050;Q59FI9;D3DS95 RPL12;hCG_21173 60S ribosomal protein L12 yes no 0 0 0 1 0 1 61.916 61.916 2 0.0064132 19250 20230619_1880_Aki_TMTPro18x_K_F1 66.262 47.951 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20940 3530 19594 39666 31819 31819 1 9606 Homo sapiens 0.16017701225860037 QAQILASEAEK Unmodified 1186.6194 0.61936665 4673 Q9UJZ1;A0A087WYB4;Q9UJZ1-2;Q6ZNW0;F2Z2I8 STOML2 Stomatin-like protein 2, mitochondrial yes no 0 0 0 3.5 0.5 1 1 46.68 46.741 3 0.0010427 12488 20230619_1883_Aki_TMTPro18x_K_F4 90.434 65.217 271110 218510 246510 262570 223610 272560 269980 291650 315220 296970 310700 344630 337490 277950 266330 311540 325460 315190 250480 200440 252240 261740 235640 275240 271040 296740 318360 301250 320320 345290 340190 290690 275570 312640 310760 299370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 196050000 20941 4673 19595 39667;39668 31820 31820 1 9606 Homo sapiens 0.03352174463930169 QAQIPLAAVIK Unmodified 1150.7074 0.7073938 2096 B3KM89;A8K6V0;O94855;O94855-2;Q4W5D3 SEC24D Protein transport protein Sec24D yes no 0 0 0 3 0 1 58.761 58.79 3 0.0019595 17917 20230619_1882_Aki_TMTPro18x_K_F3 93.258 42.974 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20942 2096 19596 39669 31821 31821 1 9606 Homo sapiens 0.1380683984521056 QAQLAQTLQQQEQASQGLR Unmodified 2125.0876 0.087592814 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 7.5 0.5 1 1 51.123 51.201 3 3.2673E-49 14094 20230619_1887_Aki_TMTPro18x_K_F7 270.95 245.36 50231 85291 52085 55260 47364 67691 53457 60424 58008 59438 52594 57950 62135 49520 72150 60681 74566 57403 46774 77727 52721 58554 49851 67415 53722 62177 58665 60070 54710 58592 63577 51963 73250 60659 71202 54619 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1938199999.9999998 20943 349;3906 19597 39670;39671 31822;31823 31822 2 9606 Homo sapiens 0.07005252130602457 QAQQERDELADEIANSSGK Unmodified 2087.972 0.97195393 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 1 3 0 1 48.518 48.598 3 6.0546E-07 13521 20230619_1882_Aki_TMTPro18x_K_F3 98.169 82.748 44908 52419 41304 44466 38883 48970 42539 42877 45454 45867 39935 41096 51893 30967 43398 45605 48639 46110 41608 47888 42245 45663 40734 49072 42783 44306 45960 46043 41766 41587 52095 33121 44577 45611 46469 43799 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45787000 20944 148 19598 39672 31824 31824 1 9606 Homo sapiens -0.02851316510941615 QAQREDALELTEK Unmodified 1529.7686 0.76855009 2147 A8KA74;P78316;E9PFK5;P78316-2;Q96GC8 NOP14 Nucleolar protein 14 yes no 0 0 1 3 0 1 43.293 43.363 3 0.0028094 11096 20230619_1882_Aki_TMTPro18x_K_F3 72.615 48.624 76125 70812 77276 82145 87091 104000 92981 94964 103180 104760 111200 105580 109910 98425 100390 127030 121510 124880 70459 64899 78598 82320 89903 103290 93738 97873 104880 105380 113620 106970 111810 103260 103570 126990 116080 118620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44148000 20945 2147 19599 39673 31825 31825 1 9606 Homo sapiens 0.024856552960500267 QAQVATGGGPGAPPGSQPDYSAAWAEYYR Unmodified 2951.3474 0.34744891 3197 M0R0C6;Q92945;M0R3J3;M0R251;M0R263 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 7 0 1 57.824 57.876 3 3.0997E-14 17028 20230619_1887_Aki_TMTPro18x_K_F7 128.89 124.2 5352.1 2460.1 3989.2 4814.6 5121.7 6637.9 6144.4 5198.8 4397.3 7509.9 6925.2 6885.7 7696.9 6577 7110.6 8003.4 8541.5 8111.3 4925 2277 4190.2 4686 5263.6 6534.1 6080.4 5472.9 4694 7442.4 7021.9 7007.5 7803.7 6871.2 7324.4 8023.2 8155.7 7704.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111820000 20946 3197 19600 39674 31826 31826 1 9606 Homo sapiens -0.05017091839681598 QAQYLGMSCDGPFKPDHYR Unmodified 2269.0045 0.004456811 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 1 1 0 1 48.282 48.282 4 4.8529E-14 13678 20230619_1880_Aki_TMTPro18x_K_F1 146.67 138.28 65403 62628 61657 65029 50775 65337 64371 61079 77527 93561 91363 90330 108830 77471 81355 96514 86405 112100 60512 57337 62812 65512 54066 65967 64544 63574 78872 92696 93813 91393 109100 81454 83581 97498 82800 106210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192700000 20947 1439 19601 39675 31827 31827 1 9606 Homo sapiens -0.0792852391332417 QAQYLGMSCDGPFKPDHYR Oxidation (M) 2284.9994 0.99937143 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 1 1 7.5 0.5 1 1 44.537 44.587 4 4.3691E-14 11299 20230619_1888_Aki_TMTPro18x_K_F8 159.4 151.31 163980 131410 158780 160330 159980 155800 159700 151890 167170 202120 215650 191480 208600 172370 194180 228970 218260 218670 151570 120560 161710 159510 165910 157890 161360 156830 171970 201190 218510 194350 212400 181450 199240 228500 208600 207800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 361360000 20948 1439 19601 39676;39677 31828;31829;31830 31829 933 3 9606 Homo sapiens -0.09172827775955739 QAQYLGMSCDGPFKPDHYRY Oxidation (M) 2448.0627 0.062699971 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 1 2 8 0 1 47.389 47.448 4 6.8253E-16 12418 20230619_1888_Aki_TMTPro18x_K_F8 149.24 142.59 44426 39959 44121 35718 40167 25280 34355 37498 28136 49807 51321 41755 49765 33609 45004 60464 50264 45946 41103 36547 44697 36359 41709 26732 34853 37785 30037 49362 51432 42540 50547 36382 46224 59464 48012 43809 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101710000 20949 1439 19602 39678 31831 31831 933 1 9606 Homo sapiens -0.10340887058691806 QASALIDRPAPHFER Unmodified 1706.8853 0.8852516 3431 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;P11171-5;Q4VB87;A0A994J847;Q29RX4;A0A2R8YCW8;A0A3B3ITP0;P11171-7;A0A2R8Y5Z6;A0A2R8Y7Y3;A0A2R8Y5G2;P11171-6;A0A2R8Y570;A0A2R8Y420;A0A3B3IU06;A0A2R8YFR9;A0A2R8Y6G5;A0A3B3IUD6;A0A2R8Y7N0;A0A2R8Y6D0;A0A1B0GWG0;A0A2R8Y4N6 EPB41 Protein 4.1 yes no 0 0 1 7 0 1 40.295 40.362 3 1.2541E-05 9399 20230619_1887_Aki_TMTPro18x_K_F7 109.92 87.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20950 3431 19603 39679 31832 31832 1 9606 Homo sapiens 0.06008438306434982 QASCSGDEYR Unmodified 1171.4564 0.45640042 1553 O95394-4;J3KN95;H0Y987;A0A8V8TMH7;B3KN28;A0A8V8TLT8;A0A494C1Q4;A0A8V8TNH4;A0A494C1E2;A0A8V8TMI1;O95394;O95394-3;A0A087WT27;A0A494C0G1;A0A494C099;H0Y8I3;A0A494C163;D6RIS6 PGM3 Phosphoacetylglucosamine mutase yes no 0 0 0 1.5 0.5 1 1 29.149 29.221 2 0.0002195 5756 20230619_1880_Aki_TMTPro18x_K_F1 120.09 91.347 3655 2374.5 6290.2 5574.9 7421.1 10987 7576.7 9507.5 5708.8 4675.7 8007.1 10543 5789.7 6727.1 6546.1 3005.7 7338.1 11091 3395.5 2200.5 6188.4 5431.9 7631.8 10647 7581 9677.3 6003.2 5158.3 8030 10293 6026.1 6868.3 6668.2 3543.9 7039.4 10435 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4350000 20951 1553 19604 39680;39681 31833;31834 31833 2 9606 Homo sapiens -0.1224695192956915 QASEGPLK Unmodified 828.43413 0.43413207 3382;4086 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q5ZEY3 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 4.5 1.12 1 1 1 1 38.654 38.721 2 0.0015284 8992 20230619_1883_Aki_TMTPro18x_K_F4 141.2 95.18 2423500 1150300 3148900 2957200 4007400 4758100 3242900 4184500 3529000 2041200 3540000 4263100 2700700 2919400 3860300 1214200 4057700 3787500 2240600 1069700 3150400 2858000 4074900 4655700 3326400 4254100 3572500 2246300 3602000 4176700 2842400 2964900 3900600 1400700 3878600 3571100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2897000000 20952 3382;4086 19605 39682;39683;39684;39685 31835;31836 31835 2 9606 Homo sapiens 0.013052364550048878 QASGNIVYGVFMLHK Oxidation (M) 1678.8501 0.85011165 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8;H3BR88 IFI16 Gamma-interferon-inducible protein 16 yes no 0 1 0 4 0 1 57.547 57.551 3 0.00067506 17326 20230619_1883_Aki_TMTPro18x_K_F4 76.82 48.523 40216 38285 44725 44873 58103 66485 49557 51427 62465 49011 50980 47147 52941 42774 51278 57607 52959 52845 37260 35089 45262 45054 59091 65239 50862 53491 62429 49648 52909 47840 53882 45058 52301 57366 50653 50243 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82001000 20953 2829 19606 39686 31837 31837 1689 1 9606 Homo sapiens 0.037840594542785766 QASGNIVYGVFMLHK Unmodified 1662.8552 0.85519702 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8;H3BR88 IFI16 Gamma-interferon-inducible protein 16 yes no 0 0 0 5 0 1 60.12 60.172 3 1.4559E-11 17966 20230619_1885_Aki_TMTPro18x_K_F5 157.8 130.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20954 2829 19606 39687 31838 31838 1 9606 Homo sapiens 0.05028363316910145 QASHAQLGDAYDQEIR Unmodified 1800.8391 0.83908927 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 0 2.5 0.5 1 1 38.934 38.995 3 3.1514000000000003E-78 9180 20230619_1882_Aki_TMTPro18x_K_F3 361.93 331.39 191630 167800 190920 167440 183810 212830 142630 148730 172710 220620 294480 345470 240200 258150 268950 246040 311260 357630 177270 153620 193690 169830 190540 210400 147400 158360 179180 222840 294420 341800 248580 268350 275200 253770 297730 338330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 536440000 20955 1958 19607 39688;39689 31839;31840 31840 2 9606 Homo sapiens -0.029296713863004697 QASPNIVIALAGNK Unmodified 1394.7882 0.78816332 164 A0A024R1U4;P51148;P51148-2;K7ERI8;K7ERQ8;K7ENY4 RAB5C Ras-related protein Rab-5C yes no 0 0 0 3 0 1 59.034 59.064 3 3.8372E-07 18016 20230619_1882_Aki_TMTPro18x_K_F3 138.02 122.75 218030 189230 202640 218330 217870 247820 238740 240670 270940 259700 247990 271790 286810 242550 255800 321840 279440 279900 201570 173460 207470 218530 225770 248220 240510 246860 273370 261830 257390 274410 290040 255280 262330 319620 267140 266290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197290000 20956 164 19608 39690 31841 31841 1 9606 Homo sapiens 0.10656076097438927 QASPTEVVER Unmodified 1114.5619 0.56185177 998 A0A0C4DG68;B7ZL34;Q8TB72-2;Q8TB72-4;Q8TB72-3;Q8TB72;C9JW01 PUM2 Pumilio homolog 2 yes no 0 0 0 2 0 1 36.118 36.176 2 0.013376 8145 20230619_1881_Aki_TMTPro18x_K_F2 96.009 66.86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20957 998 19609 39691 31842 31842 1 9606 Homo sapiens 0.00915332258387025 QASQGMVGQLAAR Unmodified 1315.6667 0.66666797 4699 Q9Y230;B4DW30;X6R2L4 RUVBL2 RuvB-like 2 yes no 0 0 0 1 0 1 42.368 42.368 2 3.1739E-06 11139 20230619_1880_Aki_TMTPro18x_K_F1 142.47 120.94 45923 30183 51771 49751 53303 66942 56919 54996 71635 54810 66050 63153 65758 49427 63283 54156 71285 64070 42457 27811 52128 48830 55411 66059 57634 57005 71852 55696 67998 63272 66967 51730 64778 54933 68078 60775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78421000 20958 4699 19610 39692 31843 31843 1 9606 Homo sapiens 0.021461304633021427 QASQGMVGQLAAR Oxidation (M) 1331.6616 0.66158259 4699 Q9Y230;B4DW30;X6R2L4 RUVBL2 RuvB-like 2 yes no 0 1 0 7 0 1 35.786 35.858 2 8.5289E-06 7643 20230619_1887_Aki_TMTPro18x_K_F7 133.42 118.75 16972 13604 13487 18937 24473 21132 20727 19329 24002 15395 21368 21171 19611 14726 19031 20118 24345 21163 15665 12499 14183 18700 24416 21172 21202 19776 24130 15958 21970 21026 20038 15693 19660 20184 23220 20101 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18230000 20959 4699 19610 39693 31844 31844 2864 1 9606 Homo sapiens 0.009018266006705744 QASVADYEETVK Unmodified 1338.6303 0.63032527 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GW82;A0A1B0GUA1;A0A0J9YWF7;H0YHM6;F8WDY6 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 2.5 0.5 1 1 47.625 47.7 3 8.1031E-05 13119 20230619_1882_Aki_TMTPro18x_K_F3 97.86 86.067 151590 123970 138650 160870 141720 158010 160770 156230 194900 183030 200400 202530 217320 173110 172180 217010 226980 233450 140080 113790 142110 159360 147560 159950 162050 160500 196810 184160 206050 203760 219080 181930 179150 218150 216690 221540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 295730000 20960 1415 19611 39694;39695 31845;31846 31846 2 9606 Homo sapiens -0.025444679524525782 QASVADYEETVKK Unmodified 1466.7253 0.72528829 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GW82;A0A1B0GUA1;A0A0J9YWF7;H0YHM6;F8WDY6 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 1 5.5 0.5 1 1 46.173 46.253 3 5.3242E-06 12261 20230619_1886_Aki_TMTPro18x_K_F6 127.71 101.8 69990 58363 68373 81947 77423 91706 77304 76632 92569 95978 104370 106450 98316 84780 88025 91531 103080 103860 64713 53617 69814 80893 79773 91615 78438 79864 93929 96281 106260 106800 100050 88533 90541 92561 98488 98512 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 447850000 20961 1415 19612 39696;39697 31847;31848 31848 2 9606 Homo sapiens 0.010594655187333046 QATDDASLLIVNR Unmodified 1414.7416 0.74160705 4076 Q5VTR2;Q05DC0;C9JWJ4;C9J0A5;C9JXC9 RNF20 E3 ubiquitin-protein ligase BRE1A yes no 0 0 0 4 0 1 51.651 51.678 2 3.5432E-18 14753 20230619_1883_Aki_TMTPro18x_K_F4 182.71 161.19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20962 4076 19613 39698 31849 31849 1 9606 Homo sapiens 0.05082591475525078 QATENAKEEVRR Unmodified 1429.7274 0.72735397 3510 Q53YD7;P26641;P26641-2;B4DUP0;B4DUK7;B4DSR4 EEF1G Elongation factor 1-gamma yes no 0 0 2 4.5 0.5 1 1 31.118 31.189 4 4.3687E-10 5982 20230619_1883_Aki_TMTPro18x_K_F4 189.3 142.33 79756 57774 135630 99544 195380 97498 122480 135920 46411 71399 126850 45515 26817 22107 146370 11237 19065 12038 74123 53243 133630 97144 194970 99875 125600 134410 54828 74621 121670 46835 36013 23030 138980 11964 19423 11451 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159080000 20963 3510 19614 39699;39700 31850;31851 31850 2 9606 Homo sapiens 0.029679390472210798 QATGIEDGELRR Unmodified 1343.6793 0.67934115 1592 Q13620-3;A0A7P0T954;Q13620;Q13620-1;K4DI93;A0A669KAX4;A0A7P0TAQ3;A0A7P0T9L3;A0A7P0T8P8;A0A7P0T9C8;A0A804CL36;A0A7P0T9D0 CUL4B Cullin-4B yes no 0 0 1 2.5 0.5 1 1 35.326 35.383 3 1.0726E-10 7727 20230619_1882_Aki_TMTPro18x_K_F3 181.44 132.7 89376 63616 83559 84750 104450 113460 100680 98782 132530 99656 117740 120870 127100 97814 110270 114280 174810 133760 82531 58446 85688 84211 106790 112200 102690 101950 132510 101390 121910 120970 128640 102590 115980 115650 166340 126990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 119710000 20964 1592 19615 39701;39702 31852;31853 31853 2 9606 Homo sapiens 0.02124865127166231 QATINIGTIGHVAHGK Unmodified 1615.8794 0.87943794 3571 P41091;Q2VIR3;Q2VIR3-2;H7BZU1 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 3.5 0.5 1 1 44.211 44.27 4 0.00050766 11426 20230619_1883_Aki_TMTPro18x_K_F4 84.508 63.261 49785 49409 52601 52609 73620 70508 55212 62624 78230 53665 71668 67767 67746 56303 71060 71760 66666 65824 46118 45240 53494 53122 74265 69803 57467 64255 78048 55195 73646 67832 69410 59255 71963 71536 63822 62586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2008999999.9999998 20965 3571 19616 39703;39704 31854 31854 1 9606 Homo sapiens 0.0961333979482788 QATPGVPAQQSPSM Oxidation (M) 1413.6558 0.65582851 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5QJR3;A0A8I5KRF4 KDM1A Lysine-specific histone demethylase 1A yes no 0 1 0 4 0 1 40.423 40.465 2 0.0056535 9770 20230619_1883_Aki_TMTPro18x_K_F4 72.2 64.555 8542.5 5866.9 7881 8456 12878 10417 8191 9560.1 8733.3 7589.9 12271 11121 13354 9692.9 8382 11532 13906 13192 7886 5395.7 8132.2 8349.3 12828 10372 8555.8 9770.7 9004.7 7884.4 12456 11096 13350 10151 8932.3 11642 13247 12515 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19972000 20966 1785 19617 39705 31855 31855 1155 1 9606 Homo sapiens -0.034453167016636144 QATPGVPAQQSPSM Unmodified 1397.6609 0.66091389 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5QJR3;A0A8I5KRF4 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 0 5 0 1 45.886 45.963 2 0.011434 12036 20230619_1885_Aki_TMTPro18x_K_F5 69.721 60.204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20967 1785 19617 39706 31856 31856 1 9606 Homo sapiens -0.022010128390547834 QATSTASTFVKPIFSR Unmodified 1739.9206 0.92063405 1394 P56556;A0A2Y9D025 NDUFA6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 yes no 0 0 1 6 0 1 52.483 52.561 3 2.9029E-14 15025 20230619_1886_Aki_TMTPro18x_K_F6 171.98 150.68 76519 82733 95131 89411 90580 96429 94973 89316 84304 91700 92334 57211 66007 48136 81787 50089 54832 34163 71040 75742 94980 89891 94438 96862 95222 91805 86838 91471 93004 59384 68846 50102 81221 49538 52581 32692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182400000 20968 1394 19618 39707 31857 31857 1 9606 Homo sapiens 0.08027056043601988 QATVGDINTERPGMLDFTGK Oxidation (M) 2165.0423 0.042282105 3396 P07108;B8ZWD1;A0A024RAF2;B8ZWD9;P07108-3;P07108-2;P07108-4;P07108-5;B8ZWD8 DBI Acyl-CoA-binding protein yes no 0 1 1 6.33 0.471 2 1 51.186 51.263 3;4 4.1184E-11 14424 20230619_1886_Aki_TMTPro18x_K_F6 130.89 119.37 445210 382260 405140 449190 432660 445210 447010 413640 433240 546750 595920 534850 566420 486110 529450 655400 570970 634110 411490 350480 415510 448110 447340 450010 449630 428490 449070 544890 602080 542280 577230 511990 542070 654300 546340 602280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 790300000 20969 3396 19619 39708;39709;39710 31858;31859 31858 2007 2 9606 Homo sapiens 0.006362655531575001 QATVGDINTERPGMLDFTGK Unmodified 2149.0474 0.047367483 3396 P07108;B8ZWD1;A0A024RAF2;B8ZWD9;P07108-3;P07108-2;P07108-4;P07108-5;B8ZWD8 DBI Acyl-CoA-binding protein yes no 0 0 1 7 0 1 54.94 55.004 3 5.007E-11 15756 20230619_1887_Aki_TMTPro18x_K_F7 122.94 113.66 352940 321720 335390 342440 244860 336020 315110 305000 381760 423440 452810 431600 494140 400280 431190 551370 473450 479280 326450 294650 340890 344210 264050 339580 315910 317010 388110 421860 462850 437030 499870 421900 442580 547250 452630 455970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1121700000 20970 3396 19619 39711 31860 31860 1 9606 Homo sapiens 0.018805694157435937 QATVVLNCVGPYR Unmodified 1475.7555 0.75548298 1474 A0A384NPM7;Q8NBX0 SCCPDH Saccharopine dehydrogenase-like oxidoreductase yes no 0 0 0 3 0 1 50.456 50.531 2 4.6216E-05 14377 20230619_1882_Aki_TMTPro18x_K_F3 147.62 113.53 42914 37297 43219 48648 54995 67466 70883 57412 66385 54970 55721 57824 59625 44428 58491 62077 57504 62468 39699 34231 44120 48422 56635 66532 70340 59306 67426 55794 57878 58129 60636 47233 59465 62107 55063 59310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64882000 20971 1474 19620 39712 31861 31861 1 9606 Homo sapiens 0.036635457029660756 QATYTTTR Unmodified 940.46141 0.46140945 3104 I3L1P8;Q6IBH0;Q02978;Q02978-2 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 6 0 1 29.693 29.724 2 0.034833 5685 20230619_1886_Aki_TMTPro18x_K_F6 76.827 64.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20972 3104 19621 39713 31862 31862 1 9606 Homo sapiens -0.011202800046362427 QAVDQISSGFFSPK Unmodified 1509.7464 0.74635808 3432 Q59GM9;P11216;H0Y4Z6;Q8TDG6 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 1.5 0.5 1 1 59.501 59.508 2;3 1.5277E-05 18439 20230619_1881_Aki_TMTPro18x_K_F2 147.71 122.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20973 3432 19622 39714;39715 31863;31864 31864 2 9606 Homo sapiens 0.011874756182578494 QAVDSPAASFCR Unmodified 1307.5928 0.59283433 2472 B4DF80;Q9H6R4-4;Q9H6R4;B3KPN5;A0A0C4DFX0 NOL6 Nucleolar protein 6 yes no 0 0 0 6 0 1 42.122 42.217 2 8.2257E-18 10435 20230619_1886_Aki_TMTPro18x_K_F6 193.3 184.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20974 2472 19623 39716 31865 31865 1 9606 Homo sapiens -0.04865837699048825 QAVDVSPLR Unmodified 983.53999 0.53999412 300 M0R0F0;A0A024R4Q8;M0R0R2;P46782;Q53G25;M0QZN2 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 0 0 0 5.5 0.5 1 1 42.738 42.826 2 3.3113E-08 10696 20230619_1886_Aki_TMTPro18x_K_F6 219.19 170.43 854640 606530 751660 887420 787400 976450 933080 868390 1150600 995110 978120 1081800 1066400 885550 887840 1186900 1162800 1060200 788820 557840 773690 873730 820350 977580 938710 898330 1152700 1002000 1016100 1087600 1077300 935680 922750 1179900 1109200 1008700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1212600000 20975 300 19624 39717;39718 31866;31867 31867 2 9606 Homo sapiens 0.04756572300482276 QAVEQQIQSHR Unmodified 1322.6691 0.66911081 2727 P33176;M1VE91;V9HW29;C1PHA2;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;B4DS27 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 5 0 1 34.591 34.678 3 2.1053E-23 7420 20230619_1885_Aki_TMTPro18x_K_F5 210.15 184.04 70389 51616 71084 69766 75032 77546 82716 82559 103420 83400 87494 85681 94295 70152 73126 79953 100440 86752 65050 47422 72202 69077 77812 77938 83585 84009 103490 84339 90775 86345 94980 73455 76267 80554 95745 82376 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281180000 20976 2727 19625 39719 31868;31869 31869 2 9606 Homo sapiens 0.020683021926060974 QAVLGAGLPISTPCTTINK Unmodified 1940.0401 0.040097261 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHJ0;A0A5F9ZHH9;H0YEL7;P24752-2 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 3.67 0.471 1 2 59.95 59.961 3;4 1.8640999999999998E-19 18405 20230619_1882_Aki_TMTPro18x_K_F3 174.59 160.91 124440 103900 121590 118360 104060 128100 132430 127040 137610 143070 121540 127450 159410 133990 123100 184670 159300 171650 115060 95245 123490 118520 110330 128770 132060 130290 139370 143260 127150 130390 159810 140690 128150 183830 152150 163130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 493680000 20977 1208 19626 39720;39721;39722 31870;31871 31870 2 9606 Homo sapiens 0.10767881605988805 QAVMEMMSQK Unmodified 1181.5243 0.52428576 4401 Q99471;H3BPF6;H3BMQ1;Q99471-3;F8VNW6;A0A0D9SFR8 PFDN5 Prefoldin subunit 5 yes no 0 0 0 1 0 1 55.229 55.229 3 0.00020482 16518 20230619_1880_Aki_TMTPro18x_K_F1 96.24 74.247 50155 41138 47330 50287 40317 50117 51286 48135 47245 59036 51008 45752 57346 43280 57258 56505 55421 48297 46356 37739 48235 50035 42757 50638 50965 49612 48581 58653 52419 46975 58279 45454 58116 56118 52995 45986 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72851000 20978 4401 19627 39723 31872 31872 1 9606 Homo sapiens -0.059215415947619476 QAVPGRPGPFPSK Unmodified 1336.7252 0.72516913 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DQN8 PRRC2C Protein PRRC2C yes no 0 0 1 4.5 0.5 1 1 41.936 42 3 0.0011223 10398 20230619_1883_Aki_TMTPro18x_K_F4 90.689 57.28 141620 124190 149860 148990 164070 173630 164720 171600 183200 156590 185300 164250 190590 159040 156760 182690 189810 182320 131070 113880 151740 148790 169230 173680 166670 175010 185580 159350 190070 166380 192740 165500 161970 183120 181240 173200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 205650000 20979 2894 19628 39724;39725 31873;31874 31873 2 9606 Homo sapiens 0.07027555100080463 QAVPLFSK Unmodified 888.5069 0.50690308 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;Q9BZZ5-5;Q9BZZ5-6;Q9BZZ5-3 API5 Apoptosis inhibitor 5 yes no 0 0 0 3 0 1 53.119 53.178 3 0.02673 15562 20230619_1882_Aki_TMTPro18x_K_F3 68.735 20.911 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20980 4478 19629 39726 31875 31875 1 9606 Homo sapiens 0.05818990248417322 QAVQILDELAEK Unmodified 1355.7296 0.72964538 4100 Q99961;Q9UQD4;Q6FGM0;Q99961-2;Q99961-3 SH3GL1 Endophilin-A2 yes no 0 0 0 4.5 0.5 1 1 63.272 63.298 3 0.00014147 19442 20230619_1885_Aki_TMTPro18x_K_F5 105.65 85.349 49870 43596 48823 51135 47219 60019 53103 52414 61728 62264 58539 58417 65850 46415 58919 71727 62850 64158 46125 39969 49683 51142 49405 59831 53476 54332 62300 62281 60531 59090 66584 49650 60324 71205 60105 61013 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 332480000 20981 4100 19630 39727;39728 31876 31876 1 9606 Homo sapiens 0.06600974732305076 QAVTNPNNTFYATK Unmodified 1567.7631 0.76307078 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z1V7;H0Y8K0;A0A3B3ITI4 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 1.5 0.5 1 1 47.202 47.239 3 2.8976E-05 13207 20230619_1881_Aki_TMTPro18x_K_F2 109.07 86.842 196170 149160 200490 177240 175630 216200 208400 196520 239700 203050 205790 218840 221780 197740 186400 257010 248390 242190 181340 136840 202820 177280 185470 215170 209210 202320 240980 205450 213500 220800 224320 207730 193980 256270 237010 230210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 572310000 20982 1488 19631 39729;39730 31877 31877 1 9606 Homo sapiens 0.0018997650422534207 QAYEDLRK Unmodified 1021.5193 0.51925868 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;B3KVJ5 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 1 5.5 0.5 1 1 38.995 39.082 3 0.0049185 9153 20230619_1886_Aki_TMTPro18x_K_F6 83.358 44.348 132830 88444 106020 115030 132790 139100 122590 123890 163140 149230 169120 150380 171090 138740 136750 177740 189690 157380 122480 81259 110370 114270 135620 138490 125460 128270 164110 149560 173140 152340 172930 145560 142790 176730 180760 149810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164720000 20983 4593 19632 39731;39732 31878 31878 1 9606 Homo sapiens 0.009359819208043518 QAYEPCLER Unmodified 1164.5234 0.52335778 2174 E9PDF6;B0I1S9;O43795-2;O43795 MYO1B Unconventional myosin-Ib yes no 0 0 0 3 0 1 40.731 40.79 2 0.00015372 9934 20230619_1882_Aki_TMTPro18x_K_F3 146.88 117.78 104910 83355 95364 107800 107390 124190 126340 118260 128880 130830 106290 128310 148350 110050 101600 150990 149820 135510 96916 76522 97949 107050 111140 124180 126320 121570 130380 131460 112080 129700 147810 116340 107060 150060 142790 128920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93069000 20984 2174 19633 39733 31879 31879 1 9606 Homo sapiens -0.05232296647818657 QAYLDFK Unmodified 883.44397 0.44396847 50 Q8WXX5;A0A024QZN2;Q2VIL4 DNAJC9;hCG_2024613 DnaJ homolog subfamily C member 9 yes no 0 0 0 7.5 0.5 1 1 53.022 53.095 2 0.060354 14887 20230619_1888_Aki_TMTPro18x_K_F8 81.548 35.83 397850 276330 342250 369760 360830 431130 409520 385030 432130 467940 491200 451420 541460 387810 426430 512980 527440 544190 367100 253910 352800 366450 375000 430110 410800 398780 441530 467930 503010 457070 545100 409200 441700 514930 503790 516480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214740000 20985 50 19634 39734;39735 31880 31880 1 9606 Homo sapiens -0.002415755396214081 QAYTGNNSSQIQAAMK Unmodified 1710.7995 0.79953264 2627 B4DZ87;O94826;B3KQK0;B3KQK5 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 0 1 0 1 45.887 45.887 3 4.1815E-06 12654 20230619_1880_Aki_TMTPro18x_K_F1 109.35 97.584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20986 2627 19635 39736 31881 31881 1 9606 Homo sapiens -0.027435146613697725 QAYTQFGGK Unmodified 998.48214 0.48214489 3505 P25789;H0YMZ1;H0YN18;H0YL69;B2RDG0;H0YMA1;P25789-2;H0YKT8;H0YMI6;H0YKS0;H0YLC2;H0YMV3 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type;Proteasome subunit beta type yes no 0 0 0 1 0 1 44.607 44.607 2 0.0026527 12152 20230619_1880_Aki_TMTPro18x_K_F1 117.31 100.74 47652 32605 43308 45542 51408 60048 51154 43670 166790 58800 51809 58089 74902 56022 45470 72410 76957 65501 43984 29976 44495 45092 53043 59227 55000 46166 158440 58902 59526 58928 74359 58751 48633 72034 73248 62329 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67029000 20987 3505 19636 39737 31882 31882 1 9606 Homo sapiens -0.01715689624938932 QCALISK Unmodified 818.43202 0.43202358 2555 B4DNN4;Q53GZ5;P23921;B4E0I8;E9PL69;B4DXB0;B4DS95;E9PP77;H0YCY7 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 0 0 0 1 0 1 44.182 44.182 3 0.089475 11958 20230619_1880_Aki_TMTPro18x_K_F1 42.109 8.9884 30122 21914 29659 30945 38666 39363 32000 33246 44406 38654 43979 37539 39356 35202 29695 36698 45820 42065 27830 20144 30302 30606 39269 39026 33039 34522 44503 38765 44874 38095 39882 36473 31292 37135 43658 39910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13677000 20988 2555 19637 39738 31883 31883 1 9606 Homo sapiens 0.015544844455462226 QCCGTDGVEANYIK Unmodified 1613.6814 0.68139134 3309 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 4.5 0.5 1 1 46.271 46.331 3 1.2996E-08 12291 20230619_1883_Aki_TMTPro18x_K_F4 149.82 130.99 178280 118400 173110 165110 173140 175610 184610 181060 196000 202360 199070 190490 239220 183400 151480 255550 261030 237480 164620 108870 176210 163060 180020 176910 185870 185160 199280 203000 205700 193840 238690 193320 162180 254300 248530 225840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 319470000 20989 3309 19638 39739;39740 31884;31885 31884 2 9606 Homo sapiens -0.10090210241514797 QCEGITSPEGSK Unmodified 1291.5714 0.57143018 1224 A0A140VK39;Q9Y570;Q9Y570-4;Q9Y570-2 PPME1 Protein phosphatase methylesterase 1 yes no 0 0 0 3 0 1 39.59 39.644 3 2.0633E-05 9438 20230619_1882_Aki_TMTPro18x_K_F3 110.8 93.859 37277 28522 38202 44974 54254 54132 50736 51109 52136 43192 46467 52661 58613 45011 54498 35300 62615 56293 34462 26248 39010 44154 54931 53962 51393 52211 52808 44375 48530 52723 59214 46223 55820 36871 59788 53268 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105090000 20990 1224 19639 39741 31886 31886 1 9606 Homo sapiens -0.06269267518405286 QCEINYVK Unmodified 1052.4961 0.4960804 3888 Q14331;E9PLY7;Q05D61;Q96ND1 FRG1;LOC283788 Protein FRG1 yes no 0 0 0 6 0 1 44.414 44.503 2 0.0010643 11464 20230619_1886_Aki_TMTPro18x_K_F6 150.4 94.958 78542 63347 64264 80899 81538 100300 101050 95815 117520 97081 91176 83415 114440 83148 64224 130240 127630 106470 72510 58143 66867 80481 83977 99804 101180 98214 117710 97688 95685 85418 113670 88314 70045 128580 121360 101450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48260000 20991 3888 19640 39742 31887 31887 1 9606 Homo sapiens -0.02806780188166158 QCFHEEVEQGVK Unmodified 1488.6667 0.66672755 1247 Q8N2D9;G3V1J9;F5H4M7;B4E277;Q53HR4;A0A140VKD1;Q9Y3Q3-2;Q9Y3Q3 TMED3 Transmembrane emp24 domain-containing protein 3 yes no 0 0 0 2.5 0.5 1 1 40.645 40.711 3 0.0011968 9936 20230619_1882_Aki_TMTPro18x_K_F3 86.262 71.572 30473 24988 28948 31753 32589 37451 35872 31427 46699 36488 36952 39364 40834 33459 37267 38468 45306 41332 28166 22933 29610 31577 33682 37296 36290 32673 46548 36724 38556 39619 41387 34984 38405 38735 43243 39241 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72151000 20992 1247 19641 39743;39744 31888 31888 1 9606 Homo sapiens -0.05805914327402206 QCFVVTEK Unmodified 1009.4903 0.49026674 430 A0A024R753;Q9NW13;Q9NW13-2;A0A0S2Z5E5;C9JE21;C9JAA9 RBM28 RNA-binding protein 28 yes no 0 0 0 6.5 0.5 1 1 46.958 47.044 2 0.028592 12638 20230619_1886_Aki_TMTPro18x_K_F6 87.308 42.226 25469 25147 29437 34580 36894 38034 31502 33240 41690 37497 35813 41110 44631 32481 30116 49705 46469 46413 23611 23083 29711 34173 37573 38090 32395 34405 41679 37787 37422 41282 44566 34718 31890 49422 44302 44118 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74592000 20993 430 19642 39745;39746 31889 31889 1 9606 Homo sapiens -0.014098786998260948 QCGQVAAAAAAQPPASHGPER Unmodified 2072.981 0.98101925 2751 C9JFK9;O95817 BAG3 BAG family molecular chaperone regulator 3 yes no 0 0 0 6 0 1 35.128 35.181 3 2.5706E-16 7653 20230619_1886_Aki_TMTPro18x_K_F6 152 129.02 2976.1 1139.6 1158.5 1826.4 2111.8 2140 3891.6 3309.2 3095 3600.5 2121.7 2359.5 3779.9 3098.2 2996.5 4478.4 3638 3185.8 2728.9 1053.1 1348.2 1791.7 2165.6 2165.9 3789.7 3306.4 3165.1 3584 2298.2 2478.3 3768.7 3244.4 3104.1 4401.4 3471.5 3041.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29627000 20994 2751 19643 39747 31890 31890 1 9606 Homo sapiens -0.012552016356494278 QCLAEFK Unmodified 894.42694 0.4269382 3090 Q6IB29;H7C2Q8;Q99848;B4DHA6;B4DRX8 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 0 0 0 7 0 1 48.711 48.798 2 0.060354 13051 20230619_1887_Aki_TMTPro18x_K_F7 81.548 37.101 261130 226940 244090 318900 269580 323830 304400 304800 364870 314550 326760 320850 348920 307090 294010 386790 394220 347870 241420 208460 250270 314350 279240 326500 306720 313030 366650 317710 337930 325170 353010 321330 305960 384970 375890 330990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131730000 20995 3090 19644 39748 31891 31891 1 9606 Homo sapiens -0.0244981941707465 QCLNQSQNFAEEMK Unmodified 1725.7451 0.74505423 3607 P49454 CENPF Centromere protein F yes yes 0 0 0 5 0 1 50.424 50.5 3 0.072842 13994 20230619_1885_Aki_TMTPro18x_K_F5 26.825 23.984 29398 23695 26318 27228 25241 28187 26006 26623 25911 34504 37996 35727 38424 30954 34829 39279 34108 36295 27157 21726 26977 27227 26330 28402 26198 27518 26918 34467 38418 36065 39008 32530 35467 39161 32657 34496 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12621000 20996 3607 19645 39749 31892 31892 1 9606 Homo sapiens -0.08878849804455058 QCLPSLDLSCK Unmodified 1319.6214 0.62135726 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7.5 0.5 1 1 55.346 55.407 3 2.9965E-05 15883 20230619_1888_Aki_TMTPro18x_K_F8 137.4 122.42 260260 228540 250490 275330 235760 281640 265740 268740 285110 308200 258950 273650 322030 250950 209640 384750 342470 345700 240690 209580 255220 274300 247040 284000 266880 276500 288640 308270 269650 278730 321340 266780 223460 381720 326410 328750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186490000 20997 3758 19646 39750;39751 31893 31893 1 9606 Homo sapiens -0.025668561140946622 QCNHQAFQK Unmodified 1159.5193 0.51927545 1703 B4DQR1;B4DKX7;A0A7P0T9D8;A0A7P0T9R3;Q8IW45-3;Q8IW45-4;Q8IW45 FLJ10769;CARKD ATP-dependent (S)-NAD(P)H-hydrate dehydratase yes no 0 0 0 8 0 1 32.714 32.715 3 0.004632 6593 20230619_1888_Aki_TMTPro18x_K_F8 73.573 56.941 27886 13080 27966 30957 40992 45230 34707 39039 38929 33062 41073 42336 39666 38242 40948 27132 48872 42988 25718 12145 28617 29938 41382 44469 35499 40129 39489 34029 41995 42396 40624 38995 41970 28383 46643 40684 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9232700 20998 1703 19647 39752 31894;31895 31895 2 9606 Homo sapiens -0.05410341350852832 QCPNAVVLFDEVDK Unmodified 1632.7818 0.78175731 1218 A0A2U3TZY2;A0A140VK11;Q9H078-4;Q9H078-2;Q9H078;Q9H078-5;Q9H078-3;Q7Z777;A0A2R8Y602 CLPB Caseinolytic peptidase B protein homolog yes no 0 0 0 5 0 1 61.302 61.353 3 0.0065838 18470 20230619_1885_Aki_TMTPro18x_K_F5 66.285 46.545 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20999 1218 19648 39753 31896 31896 1 9606 Homo sapiens -0.009322299162249692 QCPTENMAR Unmodified 1105.4645 0.46446269 2241 B4DLS8;Q53GV6;B2R791;O43395;B4DM28 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes no 0 0 0 3.5 0.5 1 1 31.733 31.802 2 0.00017501 6289 20230619_1882_Aki_TMTPro18x_K_F3 145.17 120.25 31435 15858 39926 36115 46345 64689 43178 51043 51298 38610 47809 56863 57600 48007 42670 24027 61237 53564 29063 14707 39943 35139 47641 62842 43996 52714 51628 40270 49691 56517 57772 48585 44561 26256 58359 50590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22780000 21000 2241 19649 39754;39755 31897;31898 31897 2 9606 Homo sapiens -0.08405096213778052 QCQLQRPLR Unmodified 1197.6401 0.64005929 4552 Q9HCU0;A0A172Q381;A0A120HV04 CD248 Endosialin yes no 0 0 1 4 0 1 31.882 31.942 3 0.0010317 6274 20230619_1883_Aki_TMTPro18x_K_F4 104.06 71.306 49649 39622 48819 40550 47707 50066 53055 55137 62881 21089 26691 27315 23697 24950 41847 19948 31773 28383 45896 36294 49592 41054 49776 50036 53477 55057 61907 23395 29004 27387 25187 25537 41553 20673 30474 26881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24109000 21001 4552 19650 39756 31899 31899 1 9606 Homo sapiens 0.04914486362599746 QCQLTFGPDSR Unmodified 1307.5928 0.59283433 2089 A8K6A8;O75173;O75173-2;A0A384ME91 ADAMTS4 A disintegrin and metalloproteinase with thrombospondin motifs 4 yes no 0 0 0 6 0 1 44.545 44.634 2 0.021265 11523 20230619_1886_Aki_TMTPro18x_K_F6 72.434 55.408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21002 2089 19651 39757 31900 31900 1 9606 Homo sapiens -0.04865837699048825 QCSDLLSQAQYHVAR Unmodified 1774.8421 0.84206616 2097 Q6PD62;A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog yes no 0 0 0 8 0 1 44.647 44.665 3 6.7473E-19 11345 20230619_1888_Aki_TMTPro18x_K_F8 205.28 191.49 34272 22791 28402 28966 36723 36560 34846 32102 43149 39361 45520 38955 42445 37898 38012 46944 51268 42841 31608 20934 29463 28843 37432 36301 35492 33298 43568 39399 46405 39568 43233 39593 39509 46775 48866 40765 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79314000 21003 2097 19652 39758 31901 31901 1 9606 Homo sapiens -0.01436119533150304 QCSPSQGPCCTAQCAFK Unmodified 1985.7852 0.78522126 359 A0A024R5U5;O14672-2;O14672 ADAM10 Disintegrin and metalloproteinase domain-containing protein 10 yes no 0 0 0 1 0 1 44.24 44.24 3 0.050554 12012 20230619_1880_Aki_TMTPro18x_K_F1 42.913 32.856 11510 7844.6 8371.9 10249 11472 11758 10158 7053.5 11350 14162 17840 17995 18184 13618 15156 16114 17911 19342 10608 7206.9 8821.2 10164 11638 11672 10352 7735.4 11763 14048 18010 17942 18389 14335 15622 16330 17121 18332 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23115000 21004 359 19653 39759 31902 31902 1 9606 Homo sapiens -0.16823994467813463 QCVDHYNEVK Unmodified 1290.5663 0.56628523 846 O95299;E7ESZ7;A0A7I2V594;Q7Z518;A0A7I2V3H5;A0A087WXC5;A0A7I2V2X3;A0A7I2V2W9;A0A7I2V5B2;A0A7I2V5U7;A8K413;A0A7I2V419;H7C2X4;A0A7I2V458;Q53SW4;A0A7I2V438;A0A7I2V5L0;A0A7I2V2N6;Q59FM0;A0A7I2V2F6;A0A7I2V4N8;A0A7I2V327;H7C1Y7 NDUFA10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes no 0 0 0 3.5 0.5 1 1 36.462 36.512 3 0.00034161 8124 20230619_1883_Aki_TMTPro18x_K_F4 110.74 91.382 101920 76971 91846 92862 114090 149790 112960 110560 182190 119770 129780 130730 144300 136010 122450 136550 194700 150170 94123 70625 94514 93196 117070 146180 116020 115860 179400 121110 136220 132410 145990 140120 128930 137950 185280 142650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183340000 21005 846 19654 39760;39761 31903 31903 1 9606 Homo sapiens -0.06737526590404741 QCVLSTLAQLLLDK Unmodified 1600.8858 0.88582845 4594 Q9NU22;Q6ZVV6 MDN1 Midasin yes no 0 0 0 5 0 1 67.644 67.687 3 0.00070844 21223 20230619_1885_Aki_TMTPro18x_K_F5 85.909 67.992 9760 6883.4 10036 8464.8 7393.8 9355.8 8670.6 9453.9 8489.4 9528.7 11294 9061.5 12174 8723.9 11538 10643 7023.8 9362.8 9019.1 6319 10122 8435.9 7930.2 9392.3 8674.8 9650.2 8772.9 9608.7 11480 9220.9 12346 9117.9 11491 10597 6780.2 8897.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1940400 21006 4594 19655 39762 31904 31904 1 9606 Homo sapiens 0.10942096911276167 QCVPFRR Unmodified 961.4916 0.49160414 188 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;P18621-3;J3KRB3;A0A087WWH0;J3QS96;J3QLC8;A0A0A0MRF8;P18621-2;A0A087WY81 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 yes no 0 0 1 4.5 0.5 1 1 32.456 32.526 3 0.040728 6526 20230619_1883_Aki_TMTPro18x_K_F4 62.714 36.112 97207 117530 96488 77895 160530 105640 110380 129720 132780 43430 72195 63490 51186 49574 79458 44904 52189 43202 90147 107200 98823 82535 159800 105590 114900 128460 131290 49230 75999 63179 54289 51295 78603 45236 50135 41084 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63473000 21007 188 19656 39763;39764 31905;31906 31905 2 9606 Homo sapiens 0.009318001795918462 QDAFLLSK Unmodified 920.49673 0.49673232 3637 Q9BW75;Q96CV8;P52888;K7EP46;B4DU96;K7EL02;P52888-2 THOP1 Thimet oligopeptidase yes no 0 0 0 7 0 1 54.189 54.253 2 0.0046424 15435 20230619_1887_Aki_TMTPro18x_K_F7 110.14 52.855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21008 3637 19657 39765 31907 31907 1 9606 Homo sapiens 0.03330382523188291 QDALVSLR Unmodified 900.50288 0.50288033 4149 Q7L099-4;Q7L099-3;B4DG59;B4DKC2;Q7L099;Q7L099-2;H0Y8I0 RUFY3 Protein RUFY3 yes no 0 0 0 5.5 0.5 1 1 45.44 45.522 2 0.0093807 11903 20230619_1886_Aki_TMTPro18x_K_F6 101.9 26.158 122070 96183 109180 158730 114550 98752 127900 127410 144490 115950 138480 131730 114110 100340 120720 117000 143490 122490 112750 88557 112320 154240 118730 105080 128710 128010 145880 118270 141270 131980 117600 105400 123860 117640 136930 116360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65067000 21009 4149 19658 39766;39767 31908 31908 1 9606 Homo sapiens 0.04864900754705559 QDAPHLVK Unmodified 906.49232 0.49231565 1408 B1AXG1;P51812;A0A384MDW3;B7ZB17;B4DG22;B4DKZ2;A0A2R8Y603 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes no 0 0 0 6 0 1 38.082 38.157 3 0.0024774 8790 20230619_1886_Aki_TMTPro18x_K_F6 103.7 56.633 67021 45167 60183 56246 57619 61741 63844 64791 83399 78084 85472 77344 90021 70482 71499 82499 93904 83866 61852 41477 61637 55990 60254 62093 64633 66320 83921 78195 87711 78350 90827 73602 74321 82759 89560 79679 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76456000 21010 1408 19659 39768 31909 31909 1 9606 Homo sapiens 0.03532918100279403 QDAQSLHGDIPQK Unmodified 1435.7056 0.7055559 1748 A0A8I5KNP3;Q9NR30;Q9NR30-2 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 4.5 0.5 1 1 40.522 40.565 3 9.822E-05 9760 20230619_1883_Aki_TMTPro18x_K_F4 101.75 88.074 154760 117980 146370 167700 164910 183490 166970 176280 165150 189950 184450 198300 219130 164100 150340 198950 239970 217190 142970 108440 149790 165410 169880 184130 168250 180930 169320 191400 189880 199720 219210 172390 159280 200240 228580 206180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85275000 21011 1748 19660 39769;39770 31910;31911 31910 2 9606 Homo sapiens 0.0051313429864876525 QDAQVVLYR Unmodified 1090.5771 0.57710791 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5.5 0.5 1 1 43.732 43.819 2 0.00012018 11119 20230619_1885_Aki_TMTPro18x_K_F5 152.34 105.26 272240 203810 235280 263550 259980 302150 281720 282460 363800 351560 360940 452770 465570 386670 270950 572600 528460 549650 251320 187150 242640 261700 269010 302100 285310 291800 365980 354730 375380 452910 462850 410790 294830 570140 503290 522230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 410170000 21012 3758 19661 39771;39772 31912;31913 31912 2 9606 Homo sapiens 0.03544243846226891 QDDGGSPIR Unmodified 943.43592 0.43592298 806;3082 P13591-1;A0A087WTF6;P13591;P13591-3;P13591-4;A0A087WV75;A0A087WWD4;A0A087WX77;A0A087WTE4;A0A087WWJ5;B4DSQ7;A0A087X1V2;A0A087WVU1;B7Z8D6;A0A087WZS4;H7BYX6 NCAM1 Neural cell adhesion molecule 1 no no 0 0 0 1 0 1 31.568 31.568 2 0.00015974 6627 20230619_1880_Aki_TMTPro18x_K_F1 145.9 123.98 16621 6843.6 25782 36040 31895 32787 27300 42650 36715 17214 36114 45059 30024 27953 36640 13507 39842 38473 15391 6508.1 25578 33884 32494 33559 28125 42192 36746 19603 36886 43860 31167 28638 37185 15282 38080 36282 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26142000 21013 806;3082 19662 39773 31914 31914 1 9606 Homo sapiens -0.03805754527047611 QDDSSSSASPSVQGAPR Unmodified 1674.7445 0.74452018 2003 Q86WN0;A9QQ21;A9QQ20;A9QQ18;A9QQ17;A9QQ16;A9QQ15;A9QQ14;A9QQ13;A9QQ12;Q7Z3N4;C4AMC7;Q6VEQ5;A8K0Z3;A8MWX3 WASH;DKFZp686C24272;WASH3P;WASH2P;WASH1;WASH4P Putative WAS protein family homolog 3;WAS protein family homolog 2;WAS protein family homolog 1;Putative WAS protein family homolog 4 yes no 0 0 0 2 0 1 33.206 33.264 3 2.2636E-18 6985 20230619_1881_Aki_TMTPro18x_K_F2 176.17 164.65 6175.1 4105.6 8441.6 6825.9 9977.6 8438.5 9278.5 9847.6 10941 7542.5 10970 12434 9781.9 9429.4 9960.5 7135 12251 11707 5720.6 3783.2 8397.4 6693.2 10198 8444.6 9450.2 9899.4 11037 7897 11213 12291 10039 9702.4 10235 7473.4 11695 11073 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15641000 21014 2003 19663 39774 31915 31915 1 9606 Homo sapiens -0.06586229928279863 QDEEERELR Unmodified 1202.5527 0.55274365 2097 Q6PD62;A8K6X9 CTR9 RNA polymerase-associated protein CTR9 homolog yes no 0 0 1 1 0 1 29.528 29.528 3 0.010478 5817 20230619_1880_Aki_TMTPro18x_K_F1 70.977 39.605 8803.9 5080.3 10025 10644 14164 13986 11811 12193 13972 10481 12389 14866 14289 12510 11775 10275 16578 17598 8135.1 4701 10146 10323 14307 13841 12112 12534 14042 10825 12884 14800 14412 12872 12273 10776 15823 16634 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8547300 21015 2097 19664 39775 31916 31916 1 9606 Homo sapiens -0.040430610979456105 QDEGKEEEPEADQEHA Unmodified 1839.7395 0.73949438 3467 Q5U058;P17677;P17677-2 GAP43 Neuromodulin yes no 0 0 1 1 0 1 34.018 34.018 3 2.7086E-20 7555 20230619_1880_Aki_TMTPro18x_K_F1 217.4 208.35 167060 79301 194000 249410 74086 91347 104270 110010 116920 120460 215260 260090 190560 205560 215220 80346 253120 248570 154270 74086 193290 235420 87280 104500 104140 111810 122090 125370 215510 255450 196710 207170 219730 92647 241790 234330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 458990000 21016 3467 19665 39776 31917 31917 1 9606 Homo sapiens -0.14678578581560942 QDEGVLK Unmodified 787.40758 0.40758296 3789 Q02790;B2R9U2;F5H120 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 41.342 41.393 2 0.062812 10081 20230619_1882_Aki_TMTPro18x_K_F3 80.438 19.65 191990 121720 237400 232870 254430 308210 230660 270310 245790 210300 329750 355800 272600 258800 306980 166500 361590 343880 177630 112410 237620 226840 262380 304770 234690 277100 252570 220150 332120 351040 281840 265330 313750 179210 345320 324810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 366010000 21017 3789 19666 39777;39778 31918 31918 1 9606 Homo sapiens 0.00537547563658336 QDEHGYISR Unmodified 1103.4996 0.49958587 3383 V9HW43;P04792;A0A6Q8PFK8;A0A6Q8PGK1;A0A6Q8PHJ6;B4DL87 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 0 0 0 2.86 1.25 1 2 2 1 1 29.06 29.131 2;3 1.3813E-05 5721 20230619_1880_Aki_TMTPro18x_K_F1 151.15 121.21 49935 29437 45353 56906 64991 80971 56786 58651 75993 78987 96324 105720 111600 82812 79804 63294 118640 113970 46058 27201 46829 55437 65853 79466 58334 61999 77165 79562 98556 105210 111830 85271 83745 66813 113110 107730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1056399999.9999999 21018 3383 19667 39779;39780;39781;39782;39783;39784;39785 31919;31920 31919 2 9606 Homo sapiens -0.04802394089961126 QDELGER Unmodified 845.38791 0.38791015 3931 Q15393;A8K6V3;B3KQH1 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 1 0 1 31.905 31.905 2 0.0063307 6734 20230619_1880_Aki_TMTPro18x_K_F1 133.86 54.394 38028 18944 57807 57607 76945 84111 56632 78113 58803 38508 75224 84718 59728 64804 65389 22883 83033 71190 35229 17678 57356 55266 77801 82803 58439 79099 60323 42447 75806 83156 61816 65259 67116 26530 79193 67148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60819000 21019 3931 19668 39786 31921 31921 1 9606 Homo sapiens -0.04096828447097778 QDENDDDDDWNPCK Unmodified 1764.6169 0.6169364 3904 Q14974;B2RBR9;Q14974-2;B7Z752 KPNB1 Importin subunit beta-1 yes no 0 0 0 1 0 1 46.846 46.846 3 8.55E-12 13042 20230619_1880_Aki_TMTPro18x_K_F1 146.67 146.67 153830 113990 127570 129000 117850 145270 159300 142300 156930 182490 176830 175460 205310 152850 147880 199510 207380 172810 141960 104540 131670 129310 124430 145600 158130 146680 160940 182010 181680 177690 205800 160950 154940 198110 197600 164540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 610170000 21020 3904 19669 39787 31922 31922 1 9606 Homo sapiens -0.23478738584640269 QDEVNAAWQR Unmodified 1215.5632 0.56324876 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 3 0 1 41.466 41.529 2 1.5831E-05 10272 20230619_1882_Aki_TMTPro18x_K_F3 162.64 127.83 44099 32541 39566 36768 43578 42767 48372 48905 54272 47124 53669 56112 58161 47388 48025 59817 69524 81089 40718 29843 40610 36894 45046 42952 48677 49479 54908 47994 55299 56279 58747 49871 50267 61050 66392 76751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103540000 21021 1022;3868 19670 39788 31923 31923 1 9606 Homo sapiens -0.0359103365287865 QDFLPWK Unmodified 932.4756 0.47560295 317;2897 A0A024R534;O94776;O94776-2;E9PCS8;E7EQY4;E7EV10;Q9BTC8-2;Q9BTC8;F6RRE2 MTA2;MTA3 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3 no no 0 0 0 1.5 0.5 1 1 60.293 60.298 2 0.05387 18583 20230619_1880_Aki_TMTPro18x_K_F1 84.476 40.34 67297 53936 72201 70740 63210 95089 87024 80693 97545 88939 79766 89738 103410 83463 74799 102780 96562 97622 62257 49520 72839 70368 67194 93893 86664 83648 98081 89507 83758 90835 103420 87339 77918 102610 92187 92773 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44006000 21022 317;2897 19671 39789;39790 31924 31924 1 9606 Homo sapiens 0.006664172143359792 QDFPLVK Unmodified 845.4647 0.46470391 3556 Q53Y06;P36543;P36543-3;P36543-2;C9J8H1 ATP6V1E1 V-type proton ATPase subunit E 1 yes no 0 0 0 6.5 0.5 1 1 52.31 52.386 2 0.030343 14649 20230619_1887_Aki_TMTPro18x_K_F7 98.392 42.676 285050 208920 231740 291540 211300 276170 245290 257210 358680 356290 349450 426810 425920 378810 279250 580280 497950 577850 263000 192020 239930 287270 222710 279850 248910 266810 358740 357000 362610 428610 425710 402860 300320 578710 474870 548580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192500000 21023 3556 19672 39791;39792 31925 31925 1 9606 Homo sapiens 0.03579014840045147 QDFVQHFSQIVR Unmodified 1502.763 0.7630112 3449 P14324-2;P14324;A0A087WVN4;Q14329;B3KMW3;A0A087X1D8;A0A087WTP2 FDPS Farnesyl pyrophosphate synthase yes no 0 0 0 2 0 1 53.308 53.341 3 8.6271E-05 15880 20230619_1881_Aki_TMTPro18x_K_F2 92.151 68.915 31876 23752 28713 31480 34986 33433 37642 32992 36867 30913 36708 37274 35926 24777 38030 37290 32159 35122 29434 21816 29539 31178 35870 33659 37762 33700 37572 31546 37653 37141 36742 26649 38308 37153 30846 33371 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40581000 21024 3449 19673 39793 31926 31926 1 9606 Homo sapiens 0.03174021294898921 QDGDQFYIK Unmodified 1112.5138 0.51383895 2949 P29762;F1T0F7;B5MCB5 CRABP1 Cellular retinoic acid-binding protein 1 yes no 0 0 0 4.5 1.12 1 1 1 1 50.246 50.311 2 1.1408E-05 14093 20230619_1883_Aki_TMTPro18x_K_F4 170.69 129.04 488060 428320 456980 505280 1110400 1257600 792630 766820 894450 722840 737050 758620 889600 670390 706200 926400 866120 815710 451260 392700 477080 513230 1093500 1203000 820060 815410 899510 734800 770340 765990 894020 708180 731350 919970 826800 776120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 921920000 21025 2949 19674 39794;39795;39796;39797 31927;31928 31928 2 9606 Homo sapiens -0.03791741661666492 QDGDYSPDNSAQPGDR Unmodified 1720.6925 0.69248461 4364 Q96HY7;C9JWN1;H7C1J3 DHTKD1 Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial yes no 0 0 0 1 0 1 34.645 34.645 3 3.4986E-19 7838 20230619_1880_Aki_TMTPro18x_K_F1 197.15 192.8 27959 20886 25091 28947 36439 34615 34699 35785 39864 29970 38831 37291 34305 31608 37368 30178 48929 43487 25817 19193 25917 28637 36870 34604 35239 36316 40234 30836 39689 37339 35332 32723 38538 31117 46665 41183 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53759000 21026 4364 19675 39798 31929;31930 31929 2 9606 Homo sapiens -0.1390339334204782 QDGQFSVLFTK Unmodified 1268.6401 0.6401021 2780 CON__P12763 yes yes 0 0 0 3 2.92 2 1 1 60.661 60.672 2;3 3.7664E-17 18676 20230619_1880_Aki_TMTPro18x_K_F1 237.8 173.76 + 222850 531840 654310 256040 2103200 2452300 1265000 1214600 2506500 745620 1427400 2423000 679660 943890 1458300 1001200 1556500 2514500 211830 483760 648720 310200 2049900 2284400 1359800 1312300 2433400 833450 1489900 2329600 757850 1024600 1472400 1090800 1494900 2368800 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2075599999.9999998 21027 2780 19676 39799;39800;39801;39802 31931;31932;31933;31934 31931 4 9606 Homo sapiens 0.016527648435840092 QDGSTIHIR Unmodified 1025.5254 0.52540669 262 A0A024R3U3;Q7Z7F7;Q7Z7F7-2;X6RIW1 MRPL55 39S ribosomal protein L55, mitochondrial yes no 0 0 0 3.5 0.5 1 1 31.796 31.866 3 2.1808E-05 6281 20230619_1883_Aki_TMTPro18x_K_F4 159.34 125.69 45430 29336 41368 45856 54425 49290 52543 54303 59733 44273 51544 45907 50691 43454 46287 45452 51797 51869 41922 27014 42573 44981 55376 49699 53303 54855 60070 45353 53194 46479 51561 45022 47443 46009 49506 49197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39247000 21028 262 19677 39803;39804 31935 31935 1 9606 Homo sapiens 0.013665001523122555 QDHAQQLATAAEER Unmodified 1566.7386 0.73864694 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 2.5 0.5 1 1 35.677 35.734 3 7.2198E-12 7942 20230619_1881_Aki_TMTPro18x_K_F2 181.87 140.22 101150 35565 80252 103430 106380 82635 96276 107930 110320 112420 125290 110640 120580 103800 98869 127490 108580 107490 93034 33238 83741 98469 107950 85682 98133 108630 112220 113280 127510 112260 122180 108510 101620 126540 103780 102310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 933760000 21029 349;3906 19678 39805;39806 31936;31937 31936 2 9606 Homo sapiens -0.022052836492775896 QDHLWQQSTTR Unmodified 1398.664 0.66402543 4594 Q9NU22;Q6AI22 MDN1;DKFZp686H16106 Midasin yes no 0 0 0 6 0 1 35.613 35.666 3 0.00034554 7868 20230619_1886_Aki_TMTPro18x_K_F6 89.44 80.74 18317 9935.7 20032 16885 23849 21691 20701 20895 25853 21269 23414 21705 26315 22925 18838 25041 36113 26796 16915 9167.7 20237 16542 24352 21553 21218 21405 25944 21504 24243 22071 26436 23722 20269 25210 34321 25467 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15373000 21030 4594 19679 39807 31938 31938 1 9606 Homo sapiens -0.019360016700375127 QDIAFAYQR Unmodified 1110.5458 0.54580778 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;H0YMU9;H0YM50;B4DNH8;H0YNB8;H0YKS4;A0A7I2V4P4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8 ANXA2;HEL-S-270 Annexin A2;Annexin yes no 0 0 0 6.5 0.5 1 1 46.698 46.784 2 0.00013083 12484 20230619_1886_Aki_TMTPro18x_K_F6 166.16 96.337 3215800 2498300 2687900 2744500 3413100 4220200 3291400 3166800 4069100 2451600 2468300 2183700 2108000 1956800 3078000 2332000 2611500 2200600 2968600 2290000 2786200 2770800 3490800 4130400 3347900 3288100 4032800 2512100 2592200 2222900 2210600 2045200 3082800 2332800 2500300 2093000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2535500000 21031 368 19680 39808;39809 31939;31940 31939 2 9606 Homo sapiens -0.00504329187856456 QDIEDSVSR Unmodified 1047.4833 0.4832671 582 B0AZM4;A8K6F0;A0A024R9L1;O60306;H0YH15 AQR Intron-binding protein aquarius yes no 0 0 0 1 0 1 37.55 37.55 2 5.1691E-06 9015 20230619_1880_Aki_TMTPro18x_K_F1 183.67 129.52 73031 40788 77467 81461 94182 112890 84144 93349 118100 84796 118650 117090 101400 100720 94697 71755 144110 124990 67429 37720 78607 79245 96358 111210 86501 96459 118250 87222 120920 116800 103870 102900 98994 75639 137280 118220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87639000 21032 582 19681 39810 31941 31941 1 9606 Homo sapiens -0.03857520046699392 QDILEEIK Unmodified 986.52843 0.52842638 4347 Q99575;Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 0 3.5 0.5 1 1 57.5 57.518 3 0.0026747 17416 20230619_1882_Aki_TMTPro18x_K_F3 94.692 29.386 43494 40030 44622 43517 36104 46036 42371 43589 45526 54788 51631 43793 55530 45088 46302 58733 50347 51280 40257 36668 45104 43717 38389 46308 42490 44990 46496 54426 52797 45037 56094 47201 47539 58349 48139 48781 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85618000 21033 4347 19682 39811;39812 31942 31942 1 9606 Homo sapiens 0.03462330486479459 QDLADVVQVCEGK Unmodified 1459.6977 0.69769333 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;Q6P2H7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3 0 1 54.774 54.821 3 7.0191E-07 16270 20230619_1882_Aki_TMTPro18x_K_F3 143.25 124.42 65137 60438 68215 71302 67440 77679 77090 72839 86017 82387 75868 72390 83363 66595 77471 91490 95442 88676 60304 55401 69055 71208 70388 77959 77440 75011 86745 82463 78632 73780 84563 70234 79947 91334 91097 84280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19918000 21034 3881 19683 39813 31943 31943 1 9606 Homo sapiens -0.013767610131253605 QDLADVVQVCEGKK Unmodified 1587.7927 0.79265635 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;Q6P2H7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 6 0 1 51.473 51.55 3 0.0016941 14568 20230619_1886_Aki_TMTPro18x_K_F6 78.285 52.419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21035 3881 19684 39814 31944 31944 1 9606 Homo sapiens 0.02227172458037785 QDLLAYLQR Unmodified 1118.6084 0.60840804 1411;3506 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;P35221-3;B3KSR8;P26232-2;P26232-5;P26232;Q49AD3;F6KRI5;A0A0A0MRI5;P26232-4;P26232-6;B7Z259 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 0 1.5 0.5 1 1 60.579 60.579 2 0.00016685 18877 20230619_1881_Aki_TMTPro18x_K_F2 122.33 69.543 32252 25888 36496 34781 34702 43569 36715 35551 33489 44871 39235 47158 47386 39700 35197 47635 50528 56656 29852 23774 36689 34504 36257 43189 36825 37123 34604 44897 40389 47480 47534 41637 36921 48204 48239 53694 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14522000 21036 1411;3506 19685 39815;39816 31945;31946 31946 2 9606 Homo sapiens 0.05384816880314247 QDLLFLDMLK Unmodified 1234.6631 0.66314572 236 A0A024R3C7;Q13315;E9PIN0;A0A6Q8PH76;Q8TDS0 ATM Serine-protein kinase ATM yes no 0 0 0 8 0 1 65.27 65.289 3 0.016287 20068 20230619_1888_Aki_TMTPro18x_K_F8 64.55 40.946 9918.7 8694.1 11643 11554 10025 11610 13258 14370 15071 11374 12776 10104 12405 10792 11728 12872 16438 13521 9188.8 7980.8 11661 11438 10627 11794 13239 14405 15142 11622 13183 10356 12649 11222 12202 12934 15662 12846 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6497000 21037 236 19686 39817 31947 31947 1 9606 Homo sapiens 0.05520067636712156 QDLMNIAGTTLSSK Unmodified 1477.7446 0.74464352 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 2 0 1 60.137 60.148 3 0.0001546 18656 20230619_1881_Aki_TMTPro18x_K_F2 95.347 69.406 57427 44418 52070 51007 45020 58310 54132 48236 62696 53543 59964 61924 64615 54655 69686 65379 63131 63997 53042 40733 53236 51077 47656 58168 54318 50145 63242 54116 61892 62250 66030 57178 70386 65470 60472 60796 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100860000 21038 3756 19687 39818 31948 31948 1 9606 Homo sapiens 0.024880985380150378 QDLPALEEKPR Unmodified 1294.6881 0.68811492 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;O14992;Q7KYN0 HSPA4;HEL-S-5a;HS24/p52;HS24/P52 Heat shock 70 kDa protein 4 yes no 0 0 1 4 0.816 1 1 1 44.547 44.612 3 0.00044531 11459 20230619_1885_Aki_TMTPro18x_K_F5 100.22 78.025 140420 124530 114940 129600 139110 169850 153450 134040 152450 171640 186430 149300 188950 136600 171310 175580 153030 121920 129710 114040 119360 131000 143120 167900 153820 140430 156800 170780 189540 152290 191700 143430 173520 172840 146380 116480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 643280000 21039 3544 19688 39819;39820;39821 31949 31949 1 9606 Homo sapiens 0.052558387636508996 QDLPDAMKPHEIQEK Unmodified 1777.8669 0.86688392 3721 Q6FH17;Q5U025;P62330 ARF6 ADP-ribosylation factor 6 yes no 0 0 1 4.5 0.5 1 1 45.163 45.224 4 3.6449E-08 11707 20230619_1885_Aki_TMTPro18x_K_F5 143.39 104.88 81135 70731 80679 76160 76751 103540 88647 88506 113160 100140 89724 88279 113180 87826 84774 113350 101050 88262 75050 64796 81935 76861 80539 102250 89443 91732 112970 100280 94148 90175 113390 91971 87753 112020 96437 84145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200130000 21040 3721 19689 39822;39823 31950 31950 1 9606 Homo sapiens 0.009065155496045918 QDLPGALSSNAIR Unmodified 1340.7048 0.70482762 3552 Q53YD8;P36404 hCG_23373;ARL2 ADP-ribosylation factor-like protein 2 yes no 0 0 0 7 0 1 48.437 48.523 2 2.8438E-07 12920 20230619_1887_Aki_TMTPro18x_K_F7 149.93 120.27 54865 45305 55933 58720 48277 48639 50447 52223 56809 63001 64122 69970 66690 61180 63949 75966 72899 73844 50744 41586 56616 58072 50776 50050 50981 53414 57846 63286 65604 70413 67890 64151 65637 75950 69669 70156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60616000 21041 3552 19690 39824 31951 31951 1 9606 Homo sapiens 0.04810339649611706 QDLPNAMAISEMTDK Oxidation (M) 1678.7542 0.75422193 3472 P18085;C9JAK5;U3KQF2 ARF4 ADP-ribosylation factor 4 yes no 0 1 0 4 0 1 53.287 53.306 3 0.011646 15517 20230619_1883_Aki_TMTPro18x_K_F4 60.209 48.186 61230 41282 53767 62651 59176 69085 67883 57709 74973 70868 77011 62245 70150 59537 85034 84167 69333 77940 56499 37993 55384 61552 61321 69079 68132 60127 76036 70686 78555 63577 72501 62809 85342 83836 66548 74062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27878000 21042 3472 19691 39825 31952 31952 2116 1 9606 Homo sapiens -0.058005012388093746 QDLPNAMAISEMTDK Unmodified 1662.7593 0.75930731 3472 P18085;C9JAK5;U3KQF2 ARF4 ADP-ribosylation factor 4 yes no 0 0 0 5 0.816 1 1 1 59.601 59.64 3 1.1131E-07 17745 20230619_1885_Aki_TMTPro18x_K_F5 97.183 79.266 89629 71570 93765 102590 82083 115100 101910 102000 137590 109960 99341 100410 117060 89962 104020 132970 121510 121630 82897 65777 94819 101170 86957 115040 102690 105320 136570 110490 104500 102070 118260 95458 107130 132200 116090 115650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122920000 21043 3472 19691 39826;39827;39828 31953;31954 31954 2 9606 Homo sapiens -0.04556197376200544 QDLPNAMNAAEITDK Oxidation (M) 1645.7618 0.76175015 258 P84077;A0A024R3Q0;A0A8V8TQC0;A0A8V8TNZ5;P61204;A0A8V8TQP8;A0A024R0Y6;A0A8V8TNZ0;B4DN70;B4E190;P61204-2;H0YGG7 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 1 0 3.5 0.5 1 1 49.391 49.448 3 1.9273E-05 13911 20230619_1882_Aki_TMTPro18x_K_F3 101.01 88.649 228600 160380 199670 233170 228090 221240 245300 244510 250870 248750 277170 246660 270820 239590 283580 288420 264180 286680 210970 147500 205840 229270 234920 225170 246530 248340 256300 251080 282740 250480 277220 249930 287110 288950 253110 272220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 541510000 21044 258 19692 39829;39830 31955;31956 31955 151 2 9606 Homo sapiens -0.035300256468644875 QDLPNAMNAAEITDK Unmodified 1629.7668 0.76683553 258 P84077;A0A024R3Q0;A0A8V8TQC0;A0A8V8TNZ5;P61204;A0A8V8TQP8;A0A024R0Y6;A0A8V8TNZ0;B4DN70;B4E190;P61204-2;H0YGG7 ARF1;ARF3 ADP-ribosylation factor 1;ADP-ribosylation factor 3 yes no 0 0 0 3.5 1.12 1 1 1 1 54.445 54.483 3 6.4195E-05 16151 20230619_1882_Aki_TMTPro18x_K_F3 96.208 83.44 181590 139040 176170 182010 153680 180390 182060 172150 210280 198890 192800 195030 223140 178730 217550 251760 206020 236710 167800 127680 179120 180260 162290 182320 182820 177220 211960 199500 200020 197720 226430 188800 220880 250860 197450 224880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2482100000 21045 258 19692 39831;39832;39833;39834 31957;31958;31959 31957 3 9606 Homo sapiens -0.02285721784232919 QDLPSLDEKPR Unmodified 1296.6674 0.66737948 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;B4DZB4 HSPH1 Heat shock protein 105 kDa yes no 0 0 1 4.5 0.5 1 1 44.514 44.576 3 0.017802 11463 20230619_1885_Aki_TMTPro18x_K_F5 65.593 47.784 225790 181580 226610 240370 252460 264260 260600 243900 258670 311910 326350 267760 323930 245280 262430 311450 252650 217810 208760 166730 230590 238190 260220 264980 262290 252410 266580 310160 331090 273260 327450 257280 267670 306600 241580 208000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 262850000 21046 769 19693 39835;39836 31960 31960 1 9606 Homo sapiens 0.030912483839756533 QDLTTLDVTK Unmodified 1132.5976 0.59756858 3571 P41091;Q2VIR3;Q2VIR3-2;H7BZU1 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 4.6 0.49 2 3 51.768 51.818 2;3 0.00098121 14517 20230619_1885_Aki_TMTPro18x_K_F5 93.839 67.797 162310 140380 164240 172190 162320 172730 170270 165160 212520 197250 203900 205750 212460 168070 196800 240150 231920 215540 150150 128760 166680 171300 168970 174490 172560 170150 213760 197920 209990 207290 215780 178440 202570 238660 221450 205050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 828400000 21047 3571 19694 39837;39838;39839;39840;39841 31961;31962;31963 31962 3 9606 Homo sapiens 0.03657369715392633 QDNCVHDLQAHNK Unmodified 1577.7005 0.7004873 4477 Q9BZK7;C9JLJ1;B7Z475;A0A0D9SF63 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes no 0 0 0 4 0 1 32.723 32.781 3 3.516E-07 6631 20230619_1883_Aki_TMTPro18x_K_F4 126.63 116.98 14992 13673 13480 13675 18240 19455 14770 19885 23050 20707 23627 18227 22985 20337 18389 24497 29001 23765 13861 12516 13889 13896 18493 19251 15361 20280 23031 20817 24138 18720 23278 21128 19397 24491 27609 22599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12150000 21048 4477 19695 39842 31964 31964 1 9606 Homo sapiens -0.06525492835612567 QDPAHPHVVATGGK Unmodified 1412.7161 0.71606101 2945 E9PS41;Q6RFH5;Q6RFH5-2;B4E018 WDR74 WD repeat-containing protein 74 yes no 0 0 0 6 0 1 32.51 32.547 4 0.0015262 6734 20230619_1886_Aki_TMTPro18x_K_F6 80.534 60.41 27894 14947 24993 28573 37071 29244 26212 29421 41718 29275 38426 40424 34586 30646 27755 38765 39178 34336 25715 13816 25812 27720 37206 29534 27543 30042 41449 29954 39406 40211 35117 32338 29034 38548 37341 32677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23287000 21049 2945 19696 39843 31965 31965 1 9606 Homo sapiens 0.02621161743718403 QDPQLHPEDPERR Unmodified 1615.7703 0.77028142 1913 A2IDC7;Q4TT37;A2IDC6;Q13084;Q6FHK1 MRPL28 39S ribosomal protein L28, mitochondrial yes no 0 0 1 1.5 0.5 2 2 30.868 30.901 3;4 8.339E-07 6315 20230619_1880_Aki_TMTPro18x_K_F1 143.64 116.3 39026 30258 43476 48531 54498 58555 59242 56911 59766 54558 67880 63404 63708 53148 53277 49146 113880 59875 36108 27850 44000 47610 55820 58386 59465 58194 61144 55535 69040 63616 64723 54967 57649 50076 108000 56954 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 110180000 21050 1913 19697 39844;39845;39846;39847 31966;31967;31968 31966 3 9606 Homo sapiens -0.012972908953543083 QDPSVLHTEEMR Oxidation (M) 1456.6616 0.66164217 1242 B4E0U6;A0A140VKA6;P50502;Q0IJ56;Q3KNR6;Q8NFI4;Q1XBU7;F8WAQ7 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 0 1 0 2 0.707 1 2 1 34.132 34.172 3 2.7331E-05 7627 20230619_1880_Aki_TMTPro18x_K_F1 119.63 95.8 170470 129120 173660 174530 201310 207840 190120 197420 203180 186210 219030 219060 203160 155930 187030 199750 213540 215810 157580 118620 176540 172950 206480 207400 192820 202090 206830 189750 223280 218780 206970 165320 192000 200890 204070 204800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 608300000 21051 1242 19698 39848;39849;39850;39851 31969;31970;31971;31972 31969 785 4 9606 Homo sapiens -0.048422181899695715 QDPSVLHTEEMR Unmodified 1440.6667 0.66672755 1242 B4E0U6;A0A140VKA6;P50502;Q0IJ56;Q3KNR6;Q8NFI4;Q1XBU7;F8WAQ7 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 0 0 0 2 0 1 37.97 38.033 3 1.1804E-31 8888 20230619_1881_Aki_TMTPro18x_K_F2 237.48 212.63 150590 153930 164400 156340 150350 204300 179770 160460 169310 192220 192000 214250 199640 171120 174240 206820 271740 221950 139570 140870 165650 158400 158270 201920 179270 167850 174100 193200 196420 214940 202430 179820 183150 208010 258710 210830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 573930000 21052 1242 19698 39852 31973;31974 31974 2 9606 Homo sapiens -0.035979143273607406 QDQPIDFSEDARPSPCYQLAQR Unmodified 2620.1976 0.19761355 2259 B2R894;Q96DV4;Q96DV4-2 MRPL38 39S ribosomal protein L38, mitochondrial yes no 0 0 1 4 0 1 50.123 50.158 3 2.4287E-28 14052 20230619_1883_Aki_TMTPro18x_K_F4 206.01 183.64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21053 2259 19699 39853 31975 31975 1 9606 Homo sapiens -0.04767735383211402 QDQVCIAR Unmodified 988.47601 0.47601365 3455;2572 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6;B4DQM6;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B no no 0 0 0 4 0.816 1 1 1 35.591 35.656 2 0.010317 7799 20230619_1885_Aki_TMTPro18x_K_F5 99.139 79.352 78291 53053 82713 80206 108820 106220 102320 96484 125540 96381 116130 115840 122590 97699 94320 88016 141910 120640 72350 48823 84023 79083 110700 105210 104230 99240 126110 98071 119830 116060 123570 100940 98980 90462 135170 114310 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 336380000 21054 3455;2572 19700 39854;39855;39856 31976;31977;31978 31978 3 9606 Homo sapiens -0.018685311281274153 QDQVEQFLAR Unmodified 1232.6149 0.61494998 4366 Q96IR7 HPDL 4-hydroxyphenylpyruvate dioxygenase-like protein yes yes 0 0 0 5 0 1 52.238 52.311 2 0.0001061 14741 20230619_1885_Aki_TMTPro18x_K_F5 155.5 110.13 118580 84439 96684 124930 116620 123750 142850 136030 142060 141130 136800 152780 165890 146560 129000 158690 154820 163150 109390 77669 100530 122750 120240 125470 142430 138290 144620 142700 141970 154320 166690 152010 133410 159450 147940 154880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95672000 21055 4366 19701 39857 31979 31979 1 9606 Homo sapiens 0.007947100410547137 QDSAAVGFDYK Unmodified 1199.5459 0.54586736 1413 Q53HG7;A0A384MDY8;Q14247;Q76MU0 CTTN;EMS1 Src substrate cortactin yes no 0 0 0 4.5 0.5 1 1 49.335 49.391 3 7.8823E-05 13485 20230619_1885_Aki_TMTPro18x_K_F5 122.39 79.416 184490 158540 167610 187360 195250 197710 206680 205500 250100 249130 232530 235280 256050 189950 224010 281760 256360 247050 170520 145370 172190 187010 200870 199400 209030 210540 251750 249000 240430 237980 258910 202380 230460 279540 244900 235050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 324980000 21056 1413 19702 39858;39859 31980;31981 31981 2 9606 Homo sapiens -0.04592373978516662 QDSINAYNEPNSTK Unmodified 1579.7114 0.71142914 2629 B7ZAX9;B4DZC0;O60264;Q4W5H1 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 3.5 0.5 1 1 42.185 42.238 3 3.6994E-07 10517 20230619_1883_Aki_TMTPro18x_K_F4 138.31 118.46 54879 39212 46230 55703 54747 66118 60017 59790 79659 66189 72692 74915 79118 68310 61926 72868 81009 81387 50639 36051 47879 55003 56433 65890 60795 61691 79721 66857 75181 75427 79754 70928 64384 73602 77327 77210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140420000 21057 2629 19703 39860;39861 31982 31982 1 9606 Homo sapiens -0.055238119803334484 QDSLVINLNR Unmodified 1170.6357 0.63568542 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 7 0.816 1 1 1 50.263 50.341 2 2.5642E-09 13687 20230619_1887_Aki_TMTPro18x_K_F7 197.27 146.21 558340 472040 524340 573170 528030 611760 589740 557070 572630 653330 696630 653840 678150 536120 707190 664140 644230 636990 516120 432960 535860 571020 549980 614430 590680 575620 589600 654930 708010 659850 693620 563840 714900 664020 616950 605330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1621699999.9999998 21058 4746 19704 39862;39863;39864 31983;31984;31985 31984 3 9606 Homo sapiens 0.05719300420696527 QDSWEVVEGLR Unmodified 1316.6361 0.63607935 4515 Q9H4L5-2;Q9H4L5;Q9H4L5-6;Q9H4L5-5;Q9H4L5-4;Q9H4L5-3;Q9H4L5-8;Q9H4L5-7;C9J8P4;C9JEF2;C9JZ19 OSBPL3 Oxysterol-binding protein-related protein 3 yes no 0 0 0 3 0 1 55.759 55.8 2 0.0055025 16696 20230619_1882_Aki_TMTPro18x_K_F3 100.04 44.576 45088 36927 46177 41227 55156 67658 55485 50166 61626 56575 45601 48921 67588 48137 47416 69678 58333 57929 41701 33848 46936 41636 56642 65997 56092 52613 61846 56638 48514 50003 67279 50854 49295 68947 55704 55147 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15794000 21059 4515 19705 39865 31986 31986 1 9606 Homo sapiens -0.009573246500849564 QDTQAPVVPYWR Unmodified 1458.7256 0.72556306 4301 Q92621;B4DE72;Q6P486;Q6DKH1;Q4VBX7 NUP205 Nuclear pore complex protein Nup205 yes no 0 0 0 8 0 1 52.369 52.447 2 1.2416E-17 14589 20230619_1888_Aki_TMTPro18x_K_F8 219.03 180.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21060 4301 19706 39866 31987 31987 1 9606 Homo sapiens 0.014549300292628686 QDTYGDIYNFPIHAFDK Unmodified 2042.9374 0.93740633 4467 Q9BXY0 MAK16 Protein MAK16 homolog yes yes 0 0 0 6.5 0.5 1 1 61.76 61.807 3 0.00032084 18588 20230619_1887_Aki_TMTPro18x_K_F7 57.516 47.603 498040 432530 472450 483220 463140 443470 500980 527720 480820 574700 565510 542040 597650 506080 537090 665040 586920 626630 460510 396370 481870 483630 482190 453730 502640 534490 494900 576960 577520 550830 606050 531640 550700 663210 561350 595440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190280000 21061 4467 19707 39867;39868 31988 31988 1 9606 Homo sapiens -0.04234487861117486 QDVDDEYGVSQALAR Unmodified 1664.7642 0.76419299 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A994J4Z2;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;Q59FZ6;A0A2R8YF80;A0A2R8YGP5 SMARCA4 Transcription activator BRG1 yes no 0 0 0 2 0 1 49.452 49.511 2 1.7056E-34 14221 20230619_1881_Aki_TMTPro18x_K_F2 266.97 237.23 31201 23115 26349 32714 26139 35971 30197 30684 38154 45470 43569 38768 45082 41392 33928 48437 48531 49295 28796 21247 27213 32269 27359 35981 30465 32103 38672 44962 44462 39765 45466 42982 35583 48566 46298 46809 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99729000 21062 1348 19708 39869 31989 31989 1 9606 Homo sapiens -0.041598539175083715 QDVDLCLVSSCEYK Unmodified 1714.7542 0.75422193 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 4.67 0.471 1 2 56.483 56.517 3 0.0051195 16489 20230619_1885_Aki_TMTPro18x_K_F5 71.344 59.904 72329 69226 77676 79834 58615 63766 65735 70481 73482 97491 89548 68446 89367 76784 91399 94441 86636 100230 66992 63437 78172 79577 62567 65891 66188 72259 75179 96160 90986 71151 91297 79912 92665 94931 83033 95084 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 521800000 21063 630 19709 39870;39871;39872 31990;31991 31991 2 9606 Homo sapiens -0.0745650123874384 QDVDNASLAR Unmodified 1087.5258 0.52580062 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 0 0 2.75 1.48 1 1 1 1 35.352 35.38 2 3.3408E-16 7726 20230619_1882_Aki_TMTPro18x_K_F3 185.08 147.35 73061 37126 79080 62849 187830 216350 127990 134260 159830 126860 158490 174880 152230 138640 142320 78573 178270 159000 67444 34268 81399 63267 184990 205120 133440 142450 160920 130190 162500 173900 155180 141080 146500 84664 170080 150240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6609999999.999999 21064 3414 19710 39873;39874;39875;39876 31992;31993;31994;31995 31994 4 9606 Homo sapiens -0.014461249184705594 QDVLNWLNEEK Unmodified 1386.6779 0.67794416 336 Q5H9R7-5;Q5H9R7;Q5H9R7-2;Q5H9R7-6;Q5H9R7-4;E9PKF6;H7BXH2;A0A024R5F3;Q5H9R7-3;E9PK08;B4DP39 PPP6R3;SAPS3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 0 0 0 5 0 1 62.447 62.494 3 0.059106 19048 20230619_1885_Aki_TMTPro18x_K_F5 43.672 23.343 112720 105080 133070 113690 107940 123090 112050 117990 145970 116680 134780 130390 137650 123810 130850 146860 135160 155860 104470 96249 132970 114330 114250 123680 113880 120860 146230 118490 138910 131610 140130 129130 133520 147660 129420 147860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158060000 21065 336 19711 39877 31996 31996 1 9606 Homo sapiens 7.231038398458622E-05 QDVVLNYPM Oxidation (M) 1093.5114 0.51139611 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;A8KAP3;Q15029-3;K7EP67 EFTUD2;SNRP116 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 1 0 4 0 1 54.977 54.988 2 0.072517 16205 20230619_1883_Aki_TMTPro18x_K_F4 59.8 36.871 86097 73696 88944 80360 82862 98927 84161 90639 99806 93056 95255 97000 105510 87746 96506 109010 93856 101320 79656 67524 89971 80903 86659 98441 85324 93203 100620 94053 98411 98007 106910 91938 98219 108750 89878 96287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23905000 21066 2436 19712 39878 31997 31997 1506 1 9606 Homo sapiens -0.03161913390999871 QDVYDLLK Unmodified 992.51786 0.51786169 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 5.5 0.5 1 1 58.938 58.997 3 0.0079972 17498 20230619_1885_Aki_TMTPro18x_K_F5 76.465 45.391 195260 166550 168270 203120 197920 221650 195130 176200 240780 234340 265090 267890 256800 234850 220820 253720 278010 310800 180390 152770 173830 202290 203330 221710 198290 184820 243660 234830 270440 269270 260790 244350 228530 257750 265670 294470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142030000 21067 832 19713 39879;39880 31998;31999 31998 2 9606 Homo sapiens 0.021303478320419345 QDVYGPQPQVR Unmodified 1285.6415 0.64149908 1594 O60716;H0YC95;O60716-3;O60716-2;Q68DU0;C9JZR2;A0A669KB05;O60716-5;O60716-11;O60716-10;O60716-9;O60716-17;Q96FS1;O60716-21;O60716-19;O60716-13;O60716-18;O60716-6;O60716-8;O60716-4;O60716-7;A0A669KB62;O60716-20;O60716-22;O60716-23;O60716-16;O60716-24;O60716-12;O60716-15;O60716-14 CTNND1;DKFZp781O2021 Catenin delta-1 yes no 0 0 0 4.5 0.5 1 1 39.179 39.27 2 0.00010533 9231 20230619_1885_Aki_TMTPro18x_K_F5 137.46 86.55 59988 42520 52967 54542 53596 62904 57360 61237 64717 72373 67965 64793 80715 58953 58069 89759 77049 70709 55370 39049 54411 54206 55776 62923 57870 62947 65711 72299 70091 65976 80848 62656 60668 88539 73493 67385 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62213000 21068 1594 19714 39881;39882 32000;32001 32001 2 9606 Homo sapiens 0.010103989323624774 QDWEHAANDVSFATIR Unmodified 1858.8598 0.85982471 1598 P42224;P42224-2;A0A669KB53;A0A669KBA4;A0A669KB56;A0A669KB68;A0A8V8TN81;A0A669KBI6;J3KPM9;A0A669KB52;A0A669KB75;E7EPD2;A0A669KB17;A0A8V8TLI6;D2KFR9;E7ENM1;E9PH66 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription yes no 0 0 0 4.5 0.5 1 1 53.712 53.731 3 2.0426E-09 15702 20230619_1883_Aki_TMTPro18x_K_F4 144.79 140.95 51323 44083 47424 57049 55356 63184 64338 61229 73270 55705 60313 60245 68340 50556 58850 64830 62473 69344 47441 40457 48689 56611 57140 63368 64595 62553 73567 56762 62840 60651 68996 53266 60244 65151 59786 65790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31532000 21069 1598 19715 39883;39884 32002;32003 32002 2 9606 Homo sapiens -0.03525081006637265 QDWVDGEPTEAEK Unmodified 1502.6525 0.65251728 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 1.33 0.471 2 1 48.667 48.7 2;3 0.00039847 13826 20230619_1881_Aki_TMTPro18x_K_F2 76.759 58.621 164480 124580 151030 150150 165700 194410 172390 176670 237990 178460 180370 197110 222540 192280 153090 251900 238610 244930 151920 114310 154770 150130 171380 192790 175420 181720 236320 181010 189630 199200 222640 201620 162160 251480 227510 232680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201440000 21070 3758 19716 39885;39886;39887 32004;32005 32005 2 9606 Homo sapiens -0.07870288274648374 QEAADAALR Unmodified 943.47231 0.47230849 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 2.5 0.5 1 1 35.439 35.496 2 0.00040511 7886 20230619_1881_Aki_TMTPro18x_K_F2 136.99 57.872 111730 64734 137130 140980 174360 191560 144240 162330 184060 134570 198310 222760 193730 164830 183780 97684 230890 221950 103320 59940 137760 136610 177340 189040 148500 167090 185610 140250 202750 219940 197420 168520 189150 106490 220400 209520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 193610000 21071 1718;4020 19717 39888;39889 32006;32007 32006 2 9606 Homo sapiens -0.0016887763034674208 QEAATLAANNTQLQAR Unmodified 1698.8649 0.86491009 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 6.5 0.5 2 2 42.731 42.816 2;3 1.1166E-33 10698 20230619_1886_Aki_TMTPro18x_K_F6 246.18 201.56 106070 78980 103820 108610 115240 113930 133560 115440 126810 106740 112580 117700 127740 90794 139020 121890 128960 107030 98009 72572 105860 107310 119130 114850 133340 117670 128960 108690 116950 118100 130300 96235 140500 121220 123330 101900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 584020000 21072 349;3906 19718 39890;39891;39892;39893 32008;32009 32008 2 9606 Homo sapiens 0.04343222855982276 QEAEQLR Unmodified 872.43519 0.4351947 3730;4542;4417 Q6FHM2;P62879;C9JIS1;C9JXA5;C9JZN1;Q9BRY6;Q9BRK4;Q9HAV0;A0A7I2S2S9;A8K3F6;H7C5J5;A0A6Q8PFW8;A0A6Q8PFE0;A0A6Q8PFV8;C9JD14 GNB2;LZTS2;GNB4 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Leucine zipper putative tumor suppressor 2;Guanine nucleotide-binding protein subunit beta-4 no no 0 0 0 1.5 0.5 1 1 31.524 31.556 2 0.016164 6612 20230619_1880_Aki_TMTPro18x_K_F1 110.31 28.047 62009 28145 85051 87456 111080 124590 91327 115610 107810 64816 116120 145490 97017 104770 118080 34880 133810 133300 57355 26294 84887 83804 112760 122800 93823 117320 109010 70712 118160 142440 100780 105710 120090 41972 127870 125570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 90845000 21073 3730;4417;4542 19719 39894;39895 32010;32011 32010 2 9606 Homo sapiens -0.006125491760940349 QEAGISEGQGTAGEEEEK Unmodified 1847.8021 0.80209464 689 F8VVL1;A0A024RBR3;O43583 DENR Density-regulated protein yes no 0 0 0 1 0 1 40.023 40.023 3 4.761699999999999E-19 10081 20230619_1880_Aki_TMTPro18x_K_F1 187.04 168.58 94097 55978 89603 100660 112480 122430 103140 106050 142670 110070 137490 145350 141990 122390 115470 106730 158110 158160 86826 51667 91801 98172 114840 121700 105750 109590 142780 112180 141510 145100 143560 126240 120180 110420 150860 149670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 303450000 21074 689 19720 39896 32012 32012 1 9606 Homo sapiens -0.08789432513344764 QEALQHLIR Unmodified 1106.6196 0.61964142 823 A0A087WVF4;O14646-2;O14646;A0A994J7K7 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes no 0 0 0 8 0 1 43.484 43.495 3 3.8198E-16 10886 20230619_1888_Aki_TMTPro18x_K_F8 187.64 139.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21075 823 19721 39897 32013 32013 1 9606 Homo sapiens 0.07059638974465088 QEASNLLQESNCSQYMEK Unmodified 2157.9307 0.93068275 964 Q13617-2;Q13617;A0A0A0MTN0;A0A8I5QJI3;A0A8I5KYP8;A0A140VKB1;A0A8I5KUA9;A0A8I5KQQ5;Q5T2B5;A0A8I5KU22;A0A0D9SET6;A0A8I5KVR3;A0A8I5KYZ8;B7Z1Y1;A0A8I5KXB2;A0A8I5KPX0;A0A8I5KS98;A0A8I5KTY5;A0A8I5KVE2;A0A8I5KY75 CUL2 Cullin-2 yes no 0 0 0 4.5 0.5 1 1 53.206 53.251 3 2.2175E-10 15496 20230619_1883_Aki_TMTPro18x_K_F4 143.46 127.52 16244 15619 20871 16537 14281 19702 22404 23147 21950 21119 19371 21497 25314 15912 22692 29744 24873 29454 15072 14301 20700 16690 15583 19755 22113 23345 22288 21453 20276 21633 25489 17356 23282 29622 23809 27962 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52131000 21076 964 19722 39898;39899 32014 32014 1 9606 Homo sapiens -0.1019653686626043 QEATFCSQR Unmodified 1125.4873 0.48730662 608 H7C0Y6;H7C167;B4DSL6;A8K5D9;A0A024RA49;Q9NQW6-2;Q9NQW6 ANLN Actin-binding protein anillin yes no 0 0 0 4 0 1 33.945 33.999 2 0.0025713 7138 20230619_1883_Aki_TMTPro18x_K_F4 105.2 77.941 13856 10372 14171 17660 16031 19770 17745 15531 19768 20675 20157 19121 23446 18297 17476 15935 26368 17824 12808 9555.4 14423 17243 16566 19720 17849 16305 20052 20578 20794 19440 23538 18790 18352 16167 25084 16941 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16823000 21077 608 19723 39900 32015 32015 1 9606 Homo sapiens -0.07041753824660191 QEDAFHPR Unmodified 998.45699 0.45699277 1808 Q8TEW0;Q8TEW0-3;A0A8Q3WLH5;Q8TEW0-2;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-5;Q8TEW0-8;Q8TEW0-10;F5GZI3;Q8TEW0-9;Q5VWU8;Q8IX28;Q8IX26 PARD3 Partitioning defective 3 homolog yes no 0 0 0 2.5 0.5 1 1 30.793 30.869 3 0.00039177 6053 20230619_1881_Aki_TMTPro18x_K_F2 143.45 117.89 29455 20934 30177 29343 42542 35939 34845 44437 36929 29142 46755 48050 37314 35884 42431 35489 48046 41299 27219 19244 30760 29038 42911 36049 35679 44369 37845 30830 47114 47523 38654 37366 43325 36024 45870 39189 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17263000 21078 1808 19724 39901;39902 32016 32016 1 9606 Homo sapiens -0.042297444275277485 QEDVIATANLSR Unmodified 1315.6732 0.67319314 1292;4740 A0A1S5UZ07;Q9Y490;Q9Y4G6;A0A1B0GVU7;G1UI21;H0YMT1 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 0 3.33 0.471 2 1 45.603 45.663 2;3 3.6168E-07 11999 20230619_1883_Aki_TMTPro18x_K_F4 131.32 105.85 40955 30657 36437 39082 40726 43255 39251 44763 53029 43418 45798 48653 40714 42853 45605 48120 53381 53582 37815 28147 37465 38833 41947 43459 40100 45574 52927 44127 47135 48955 42019 44642 46732 48572 51001 50833 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116200000 21079 1292;4740 19725 39903;39904;39905 32017;32018 32018 2 9606 Homo sapiens 0.02798346895656323 QEEAEYVR Unmodified 1022.4669 0.46688876 1078 L7RT18;A0A0S2Z3Q4;P46108;A0A0S2Z3K9;P46108-2 CRK Adapter molecule crk yes no 0 0 0 1 0 1 34.873 34.873 2 0.0015284 7938 20230619_1880_Aki_TMTPro18x_K_F1 141.2 109.82 45723 26877 47070 48320 52842 56695 56650 55620 64635 51870 74219 70635 68614 53928 51295 37015 89231 70028 42215 24808 47800 47116 54519 56636 57150 56804 65692 53206 75397 70254 69381 55348 54463 39369 84876 66234 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40968000 21080 1078 19726 39906 32019 32019 1 9606 Homo sapiens -0.04344601212812904 QEEALAEFLQR Unmodified 1332.6674 0.66737948 590 A0A024R9R3;Q9P253 VPS18 Vacuolar protein sorting-associated protein 18 homolog yes no 0 0 0 3 0 1 60.094 60.123 3 0.017133 18457 20230619_1882_Aki_TMTPro18x_K_F3 61.235 32.836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21081 590 19727 39907 32020 32020 1 9606 Homo sapiens 0.014352483839729757 QEEDEDYREFPQK Unmodified 1711.7326 0.73255851 3013 G3XAG1;Q96ME7-3;Q96ME7;B4DES6;B7Z9P6;Q96ME7-2 ZNF512 Zinc finger protein 512 yes no 0 0 1 1.5 0.5 1 1 43.175 43.216 3 0.00012973 11306 20230619_1881_Aki_TMTPro18x_K_F2 102.29 90.271 61858 52661 68047 70600 59341 78702 80024 73988 80216 79782 91212 109140 99197 89286 76271 112510 117410 132000 57260 48350 68523 69920 62946 78814 79500 76104 82131 81206 93519 108780 99975 93970 80436 113660 112040 125110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96224000 21082 3013 19728 39908;39909 32021 32021 1 9606 Homo sapiens -0.09483846671491847 QEEELQAKDEELLK Unmodified 1700.8469 0.84685999 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 1 1.5 0.5 1 1 51.415 51.437 3 1.3527E-08 15094 20230619_1881_Aki_TMTPro18x_K_F2 154.51 114.33 242930 214580 234480 237360 227820 243570 263780 253210 263010 298540 298790 310010 337740 253870 281110 364030 341570 328510 224680 196620 238810 238040 238020 246160 263920 259260 269640 299500 306640 312370 340590 269640 290640 361790 326130 312440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72108000 21083 3549 19729 39910;39911 32022;32023 32023 2 9606 Homo sapiens 0.02447043090637635 QEEENPAEETGEEK Unmodified 1617.6642 0.66420417 1982 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-8 ENSA Alpha-endosulfine yes no 0 0 0 1 0 1 38.778 38.778 3 1.3678E-11 9494 20230619_1880_Aki_TMTPro18x_K_F1 170.74 140.18 45331 24377 46857 54536 50344 63407 51272 54397 72384 47744 68199 83480 84384 69692 49646 53960 98955 100100 41838 22591 47580 52638 52138 63156 52303 56038 72281 49751 70926 82594 83994 71572 53828 57045 94210 94582 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234650000 21084 1982 19730 39912 32024 32024 1 9606 Homo sapiens -0.11992136042022139 QEEEQDLDGEKGPSSEGPEEEDGEGFSFK Unmodified 3184.3116 0.31163607 1537;3770 A0A481SVA1;P84157;A0A481SVJ4;A0A481SVD9;P84157-3;P84157-2 MXRA7 Matrix-remodeling-associated protein 7 no no 0 0 1 1.5 0.5 1 1 53.693 53.707 4 2.1043E-15 16055 20230619_1881_Aki_TMTPro18x_K_F2 145.19 134.39 106310 92193 111240 120880 106830 116620 127440 126420 117360 153250 190760 169620 121940 101610 246830 102540 126140 91129 98376 84620 112590 119660 111780 118480 127070 129210 123060 153770 189350 169060 132370 107070 241330 102900 121610 86804 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 341470000 21085 1537;3770 19731 39913;39914 32025;32026 32025 2 9606 Homo sapiens -0.19314728179324447 QEEERQDGGQNESFK Unmodified 1779.766 0.7659839 1002 A8K6X3;A0A0C4DG89;Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 1 1.5 0.5 1 1 35.446 35.475 3 5.4528000000000005E-25 7875 20230619_1881_Aki_TMTPro18x_K_F2 220.27 193.54 34298 22352 30609 37995 45578 49317 44495 43128 51750 38449 48815 44512 49861 36972 44154 30923 59513 43193 31646 20605 31675 37193 46136 48842 45129 44363 52141 39321 50235 44653 50561 38109 45761 31908 56681 40954 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124650000 21086 1002 19732 39915;39916 32027 32027 1 9606 Homo sapiens -0.0927084489956087 QEEESLGQVTDQVEVNAQNSVPDEEAK Unmodified 2971.353 0.35304738 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;C9J813;Q6PJM5;Q6P707;Q05DR4;C9JEK3 CALD1 Caldesmon yes no 0 0 0 2 0 1 57.771 57.786 3 5.3085E-05 17719 20230619_1881_Aki_TMTPro18x_K_F2 83.362 76.086 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21087 3798 19733 39917 32028 32028 1 9606 Homo sapiens -0.05377502629244191 QEEETAQLK Unmodified 1074.5193 0.51931826 1740 A0A804HKD7;E9PS63;B4DQA5;Q9Y6Y7;Q9UEL5;Q6AI42;F5H8L0;B7ZAP0;Q5R372-7;Q5R372-8;Q5R372-6;Q5R372-5 RABGAP1L;IDN4-GGTR7;DKFZp686E1450 Rab GTPase-activating protein 1-like, isoform 10;Rab GTPase-activating protein 1-like yes no 0 0 0 2.5 0.5 1 1 44.416 44.494 2 0.057116 11919 20230619_1881_Aki_TMTPro18x_K_F2 66.073 14.286 218170 132300 222630 248000 279810 312560 219480 213530 286140 265810 337760 327180 323780 281600 282190 199520 369650 342050 201440 122180 226750 241470 284650 308710 226950 226470 289720 267870 343350 327580 328980 287820 292010 210100 352650 323470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 151260000 21088 1740 19734 39918;39919 32029 32029 1 9606 Homo sapiens -0.014960628698872824 QEELTPLGVHLAR Unmodified 1461.794 0.79397698 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5;E7EWK3;H7C5F5;H7C514 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 0 0 5.5 0.5 1 1 47.85 47.928 3 0.024438 12901 20230619_1885_Aki_TMTPro18x_K_F5 55.176 36.078 26766 25843 27530 27086 34796 39430 32918 30606 45046 30467 37033 37071 36658 32988 29859 30072 38147 38673 24783 23661 28012 27421 35544 38739 33658 31875 44832 31043 38344 37189 37124 34010 30939 30752 36422 36638 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41625000 21089 4503 19735 39920;39921 32030 32030 1 9606 Homo sapiens 0.08155174609146343 QEEMNSQQEEEEMETDAR 2 Oxidation (M) 2243.843 0.84304953 3850 Q13435;E9PPJ0;E9PJ04;H0YCG1 SF3B2 Splicing factor 3B subunit 2 yes no 0 2 0 1 0 1 32.379 32.379 3 4.1419E-14 6918 20230619_1880_Aki_TMTPro18x_K_F1 160.09 154.24 4295.9 4523.1 3784.7 7012.3 5442.4 7555.8 5504.7 6799.1 7748.3 5366.5 6840.6 7038.2 5336.8 6647 7013.1 5621.2 7958.3 5311.2 3975.5 4157.1 3934.1 6874.3 5541.2 7573.5 5615.8 6959 7718.9 5556.5 6999.1 7055.7 5590.6 6803 7145.2 5655.3 7587 5057.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40228000 21090 3850 19736 39922 32031 32031 2524;2525 1 9606 Homo sapiens -0.22911827318330324 QEEMNSQQEEEEMETDAR Oxidation (M) 2227.8481 0.84813491 3850 Q13435;E9PPJ0;E9PJ04;H0YCG1 SF3B2 Splicing factor 3B subunit 2 yes no 0 1 0 1 0 2 37.603 37.603 3 1.1077E-30 9723 20230619_1880_Aki_TMTPro18x_K_F1 233.37 230.27 31864 25173 33826 37082 33284 42687 36282 36337 47331 38911 45527 44927 45800 41788 41069 47259 47213 49448 29472 23144 34218 36522 34755 42565 36755 37637 47485 39399 46798 45247 46535 43485 42219 47510 45129 46935 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 132850000 21091 3850 19736 39923;39924 32032;32033;32034 32034 2524;2525 3 9606 Homo sapiens -0.21667523455698756 QEFAQHANAFHQWIQETR Unmodified 2240.0511 0.051147728 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q14917;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 1 0 1 49.872 49.872 4 0.0003123 14302 20230619_1880_Aki_TMTPro18x_K_F1 78.177 63.087 45367 38593 42609 49790 60660 71434 62503 66529 80981 68156 53821 59930 76970 56845 53789 86519 71815 76668 41939 35419 43846 49629 61698 70453 63446 68300 80401 68578 57531 61134 76697 60345 56281 85806 68571 72906 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28841000 21092 1022;3868 19737 39925 32035 32035 1 9606 Homo sapiens -0.019275799754723266 QEFEFWYPVDLR Unmodified 1627.7671 0.76709352 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRP1 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0 1 64.197 64.242 2 0.0049006 19835 20230619_1885_Aki_TMTPro18x_K_F5 101.71 81.048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21093 1603 19738 39926 32036 32036 1 9606 Homo sapiens -0.021679340020682503 QEGESEPPVTR Unmodified 1227.5731 0.57314474 2954 F2Z2W7;Q8IZ69;Q8IZ69-2;B4E213 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes no 0 0 0 1 0 1 32.054 32.054 2 0.046624 6774 20230619_1880_Aki_TMTPro18x_K_F1 76.143 53.403 3551.8 3448.8 5784.2 4589.7 7239.4 9666.1 5654.7 6351.6 8410.3 5612.6 6529.2 9015.8 9781.3 5602.3 7445.7 4262.4 8988.8 8135.4 3305.2 3164.8 5706.6 4606.1 7374.8 9306.2 5880.2 6693.1 8332.9 5821.5 6944.5 8867.1 9751.2 5836.8 7677.9 4532.3 8579.6 7689.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3149400 21094 2954 19739 39927 32037 32037 1 9606 Homo sapiens -0.03153890438147755 QEGGDNDLIER Unmodified 1244.5633 0.56330834 914 P30566;A0A7P0T9A7;A0A7P0Z472;A0A096LNY6;X5D8S6;A0A1B0GTJ7;A0A1B0GWJ0;B4DP46;A0A0A6YY92;Q71UA4;A0A7P0T8E4;A0A096LNY5;B4DUM2 ADSL Adenylosuccinate lyase yes no 0 0 0 1 0 1 38.172 38.172 2 8.8016E-06 9265 20230619_1880_Aki_TMTPro18x_K_F1 163.9 117.47 196460 153080 174700 187770 202600 213880 201860 202610 275580 212730 250620 259910 261370 228360 230750 262160 303380 284190 181440 140470 179760 187120 208320 214070 205830 208060 275360 216040 258800 260690 265090 238360 239350 264060 289440 269760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 396120000 21095 914 19740 39928 32038 32038 1 9606 Homo sapiens -0.049190784435495516 QEGHNLGLLHGDMDQSER Oxidation (M) 2050.9127 0.91266492 4199 Q86XP3;Q86XP3-2;B3KTL4;B3KX23;T2DQ69;B3KV84 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 1 0 2.5 0.5 1 1 35.021 35.08 4 8.4199E-10 7682 20230619_1881_Aki_TMTPro18x_K_F2 141.1 119.26 18276 13321 20487 22490 24590 24970 22198 23977 24608 23557 26439 27015 27757 25416 25959 19428 24858 24466 16905 12272 20698 21976 25131 25030 22606 24550 25010 23937 27104 27197 28207 25952 26330 19930 23792 23186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85184000 21096 4199 19741 39929;39930 32039 32039 2702 1 9606 Homo sapiens -0.07075491006162338 QEGLDGGLPEEVLFGNLDLLPPPGK Unmodified 2603.3483 0.34828376 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24;E2PSM9 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 6 0.816 2 2 2 66.347 66.383 3;4 1.6853E-05 20714 20230619_1885_Aki_TMTPro18x_K_F5 86.856 83.521 20583 16312 21086 20234 17794 22392 21722 21353 24590 22781 23778 26133 20610 17508 23313 28426 24552 22462 19033 14968 21327 20145 18870 22448 21769 21927 24847 23045 24318 26088 21268 18907 23756 28041 23465 21406 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 50440000 21097 2414 19742 39931;39932;39933;39934;39935;39936 32040;32041;32042 32040 3 9606 Homo sapiens 0.11074354547235998 QEHADGLLK Unmodified 1009.5193 0.51925868 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 3.5 0.5 1 1 38.999 39.048 3 0.00062073 9196 20230619_1883_Aki_TMTPro18x_K_F4 108.7 63.017 30901 16699 27549 32568 36144 38437 35191 36903 48673 35461 44228 45449 48637 36543 32631 52037 51114 50612 28487 15440 28424 31629 36858 38361 35947 37765 48597 36244 45761 45419 48728 38819 34590 51900 48723 48088 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122710000 21098 1002 19743 39937;39938 32043 32043 1 9606 Homo sapiens 0.014879819208204026 QEIAEAQQLITICR Unmodified 1671.8614 0.86140461 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 6 0 1 59.29 59.352 3 4.3448E-22 17866 20230619_1886_Aki_TMTPro18x_K_F6 186.68 163.67 125700 101170 121550 146080 125640 148300 137010 145900 153600 156270 166880 171670 185920 149560 145140 203540 181820 207210 116190 92986 124050 143790 130580 149670 138050 149500 156110 157820 171420 172910 187170 157900 150660 203680 173780 196680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 239990000 21099 3647 19744 39939 32044;32045 32045 2 9606 Homo sapiens 0.0523483675776788 QEIFQEQLAAVPEFR Unmodified 1803.9155 0.91554867 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 5.5 0.5 2 2 62.167 62.217 2;3 0.017461 18911 20230619_1885_Aki_TMTPro18x_K_F5 58.164 45.126 160010 147390 155160 176290 164370 185340 180600 170740 193300 190750 167470 159540 180810 145350 178020 227710 166860 192970 148040 135130 158300 175770 170470 186420 181530 176010 195280 190770 173610 163020 183930 154780 180750 225390 159940 183560 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2555400000 21100 4753 19745 39940;39941;39942;39943 32046;32047 32047 2 9606 Homo sapiens 0.045747521809744285 QEILAALEK Unmodified 1013.5757 0.57571092 58 Q53FJ5;A0A024QZQ2;Q59EN5;P07602;P07602-2;P07602-3;B4DEK5;Q5BJH1 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes no 0 0 0 6.5 0.5 1 1 60.211 60.263 3 0.0043489 17932 20230619_1887_Aki_TMTPro18x_K_F7 67.08 27.295 25857 20144 27728 26813 19021 35725 27649 31964 44623 32143 26728 43142 46825 42806 31077 56695 53941 103940 23917 18500 27895 26645 20823 35315 27905 32905 43770 32849 29240 43277 46466 44972 33298 59274 51735 98038 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173950000 21101 58 19746 39944;39945 32048 32048 1 9606 Homo sapiens 0.06946609757460465 QEILENK Unmodified 872.46035 0.46034682 4742 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 3.5 0.5 1 1 44.358 44.416 2 0.022633 11453 20230619_1883_Aki_TMTPro18x_K_F4 105.57 38.886 58073 36732 71044 71782 91122 119040 83699 91313 102680 73901 102570 117370 106830 94133 94016 56435 110640 112890 53721 33935 71425 70143 92999 116020 85426 94699 103400 77008 105520 116270 108310 95917 96525 60617 105710 106620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46274000 21102 4742 19747 39946;39947 32049 32049 1 9606 Homo sapiens 0.019015056264720442 QEILEQVLNR Unmodified 1240.6776 0.67755023 1634 F8W7R3;B3KNW8;A0A6Q8PGF4;B7ZMF2;A0A6Q8PH09;Q9NVI1-2;Q9NVI1-1;Q9NVI1;H3BP78;A0A8Q3SIZ6;A0A8Q3SIW9 FANCI Fanconi anemia group I protein yes no 0 0 0 7 0 1 59.38 59.428 3 0.0001019 17567 20230619_1887_Aki_TMTPro18x_K_F7 120.77 76.132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21103 1634 19748 39948 32050 32050 1 9606 Homo sapiens 0.06683856109225417 QEILPEER Unmodified 1012.5189 0.51892433 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;A0A8I5KPQ8;A0A8I5KS07;A0A8I5KW29;A0A8I5KYL4;A0A8I5KNL1 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 0 1 0 1 41.353 41.353 2 0.034376 10678 20230619_1880_Aki_TMTPro18x_K_F1 76.17 46.328 56512 39610 39570 53112 49747 64309 69540 68262 93481 57209 61817 69133 81013 66578 48902 77930 93717 91794 52079 36396 41873 52653 51550 64223 69631 69163 92490 58851 65759 69581 80599 69391 52919 78809 89221 87047 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22355000 21104 88 19749 39949 32051 32051 1 9606 Homo sapiens 0.013165622009523759 QEILVEPEPLFGAPK Unmodified 1665.8978 0.89777334 3336 O94888;C9JD50 UBXN7 UBX domain-containing protein 7 yes no 0 0 0 4 0 1 62.311 62.315 3 0.041364 19326 20230619_1883_Aki_TMTPro18x_K_F4 45.723 26.145 21632 16558 19612 22093 23350 24203 24787 21989 28259 24563 24632 29329 31378 26886 26736 26736 34932 33818 19979 15208 20162 21877 23991 24265 25004 22699 28449 24844 25771 29455 31602 27815 27718 27268 33336 32050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31933000 21105 3336 19750 39950 32052 32052 1 9606 Homo sapiens 0.09146036926131274 QEIMSDQR Unmodified 1005.4549 0.45494386 4517 Q9H501;Q05C10;Q3SWV1;Q6P6H6;Q8IWH6 ESF1 ESF1 homolog yes no 0 0 0 2 0 1 34.861 34.917 2 0.032218 7655 20230619_1881_Aki_TMTPro18x_K_F2 86.136 32.642 18487 9800.6 20106 21204 25312 26462 20994 23741 27366 22825 28376 33362 29235 26533 25250 21335 39115 35625 17070 9078.2 20371 20522 25759 26279 21626 24413 27546 23444 29133 33128 29647 27328 26485 22337 37267 33698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13659000 21106 4517 19751 39951 32053 32053 1 9606 Homo sapiens -0.047565412276412644 QEISAAFK Unmodified 892.46543 0.46543219 3416 V9HWE0;P08758;E9PHT9;B4DNG6 HEL-S-7;ANXA5 Annexin;Annexin A5 yes no 0 0 0 6 0 1 48.585 48.664 3 0.0055049 13312 20230619_1886_Aki_TMTPro18x_K_F6 92.051 67.716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21107 3416 19752 39952 32054 32054 1 9606 Homo sapiens 0.014898094890895663 QEIVSLFNAFGR Unmodified 1379.7197 0.7197494 4359 Q96HE7 ERO1L ERO1-like protein alpha yes yes 0 0 0 3.5 0.5 1 1 64.119 64.138 2 1.5348E-05 20071 20230619_1883_Aki_TMTPro18x_K_F4 167.12 119.85 35969 28247 37668 42038 30986 36300 34216 34874 42609 49852 51251 54358 48935 49186 52724 65029 54510 64814 33265 25974 38046 41227 32826 37097 34600 36144 43307 49708 52107 54813 50250 51708 53720 65042 52209 61525 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60592000 21108 4359 19753 39953;39954 32055 32055 1 9606 Homo sapiens 0.04507831517594241 QEKPAEKPAETPVATSPTATDSTSGDSSR Unmodified 2944.3898 0.38976723 3653 P54727;B4DEA3;Q53F10;B7Z4W4;B7ZA74;P54727-2;H0Y579 RAD23B UV excision repair protein RAD23 homolog B yes no 0 0 2 4 0.816 1 1 1 39.017 39.08 4 5.739999999999999E-21 9148 20230619_1885_Aki_TMTPro18x_K_F5 162.07 155.64 84930 100800 138950 96296 154890 114780 158010 118270 60387 107990 143690 39687 33790 14309 215510 8481.7 11383 6443.1 79167 92168 136590 98041 158830 114970 156170 120350 70411 107430 138360 42738 46214 15424 203550 9180.9 12830 6159.4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 119820000 21109 3653 19754 39955;39956;39957 32056;32057;32058;32059 32059 4 9606 Homo sapiens -0.0046520601281372365 QELAVFCSPEPPAK Unmodified 1571.7654 0.76537896 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 6.5 0.5 1 1 56.001 56.067 3 0.00010672 16480 20230619_1886_Aki_TMTPro18x_K_F6 96.163 79.764 79066 63414 75705 86490 67626 84831 83260 88011 99814 91752 104910 102610 108890 102430 98634 128480 109120 131850 73076 58246 77141 85408 71410 85937 83586 89799 100910 92882 107550 103770 110600 107000 101230 128790 104460 125120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95308000 21110 1292 19755 39958;39959 32060 32060 1 9606 Homo sapiens 0.002366889176755649 QELDDILK Unmodified 972.51278 0.51277632 1005;1857 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;Q8TDI0;A0A2R8Y5M9;K7EMY3;Q659D0;Q659F1;B3KRD4;A0A8V8TR54;Q12873;Q12873-3;Q12873-2;B4DLC6;A0A5F9ZHX5 CHD4;CHD5;DKFZp434P202;DKFZp434K213;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3 no no 0 0 0 3.5 0.5 1 1 56.237 56.26 3 0.0091148 16883 20230619_1882_Aki_TMTPro18x_K_F3 78.06 7.1521 99926 76495 78025 88721 97825 104650 96423 93241 115140 109870 113770 120720 135200 115520 94996 140650 138200 129600 92194 70158 81439 88802 100060 104380 97864 96497 116220 110520 117730 121910 135450 120630 99937 140180 131760 123240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 224040000 21111 1005;1857 19756 39960;39961 32061 32061 1 9606 Homo sapiens 0.02542043969435781 QELEEEQRR Unmodified 1215.5844 0.58437813 3783 Q6FHM5;Q01664 TFAP4 Transcription factor AP-4 yes no 0 0 1 1 0 1 29.23 29.23 3 2.2877E-05 5671 20230619_1880_Aki_TMTPro18x_K_F1 160.53 84.361 15245 8177.1 17556 16570 24415 21584 20562 22726 23665 16703 24578 30437 22507 21738 21463 15271 29798 25098 14084 7565.5 17733 16101 24668 21467 21059 22972 23939 17623 25123 29950 23012 22358 22264 16025 28398 23751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17771000 21112 3783 19757 39962 32062 32062 1 9606 Homo sapiens -0.014790683440196517 QELGEAR Unmodified 801.39808 0.39808091 3236 Q5STK2;O15212;I7HJT1;A2AB88 PFDN6;HKE2 Prefoldin subunit 6 yes no 0 0 0 1.5 0.5 1 1 31.26 31.291 2 0.056552 6517 20230619_1880_Aki_TMTPro18x_K_F1 83.265 9.1373 51767 22114 69491 72738 94875 88098 65999 93142 66658 45198 96122 112410 64888 71031 80586 26859 114650 101960 47860 20698 69484 69401 95577 87952 68367 93478 68898 50251 96001 109550 68090 72287 83234 32086 109280 96089 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58814000 21113 3236 19758 39963;39964 32063 32063 1 9606 Homo sapiens -0.010562207218640651 QELIDFK Unmodified 891.47018 0.47018322 2117 A8K885;Q9UNH7;A0A0A0MRI2;B4DJS7;Q9UNH7-2;Q5QTQ6 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 5 0 1 54.979 55.046 3 0.010575 15876 20230619_1885_Aki_TMTPro18x_K_F5 86.833 17.657 31185 22872 26723 28292 27345 34698 30076 31895 38135 33719 35982 41547 43124 35298 31049 49229 46016 51686 28783 20994 27541 28210 28488 34523 30422 32821 38302 34228 37354 41623 43221 37358 32713 49322 43922 49045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18867000 21114 2117 19759 39965 32064 32064 1 9606 Homo sapiens 0.020106936318597946 QELQELNDR Unmodified 1143.552 0.55201537 2433 B3KWQ6;P41219;P41219-2;F8W835 PRPH Peripherin yes no 0 0 0 2 0.816 1 1 1 41.381 41.426 2 3.6423E-08 10459 20230619_1881_Aki_TMTPro18x_K_F2 204.28 119.07 1386100 1045800 1096600 1177800 1037500 1144900 1168000 1071900 1472400 1600200 1963600 2139000 1842900 1689000 1750700 2004200 2233700 2232200 1278900 958950 1137500 1178500 1087100 1159100 1179900 1115100 1502200 1605100 1987300 2131300 1881500 1773100 1809900 2021000 2132500 2117700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1619799999.9999998 21115 2433 19760 39966;39967;39968 32065;32066 32066 2 9606 Homo sapiens -0.01401855747008085 QELQETQER Unmodified 1159.5469 0.54692999 854 A0A087WYC0;A0A8I5KT73;A0A1W2PQY5;A0A8I5KNZ1;A0A8I5QJQ7;A0A6Q8KRG2;B7ZC06;A0A8I5KZ68;A0A8J9BZL8;Q08379;Q08379-2 GOLGA2 Golgin subfamily A member 2 yes no 0 0 0 1 0 1 32.694 32.694 2 0.026409 7054 20230619_1880_Aki_TMTPro18x_K_F1 74.162 39.63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21116 854 19761 39969 32067 32067 1 9606 Homo sapiens -0.02646159609616916 QELSFAAR Unmodified 920.47158 0.4715802 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 5.5 0.5 1 1 43.37 43.457 2 0.00077606 10965 20230619_1885_Aki_TMTPro18x_K_F5 170.24 117.84 635190 503550 556040 551840 452730 536120 554890 521130 623360 712740 771520 727610 772690 604420 612800 852390 774700 680520 586620 461530 569840 553430 481720 543150 555960 538740 637330 710330 784130 734160 780670 640580 636200 842290 739010 648520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1145600000 21117 3606 19762 39970;39971 32068;32069 32068 2 9606 Homo sapiens 0.008163277206108432 QELSHALYQHDAACR Unmodified 1797.8217 0.82166506 4685 Q9UMS4;F5GY56;F5H2I0 PRPF19 Pre-mRNA-processing factor 19 yes no 0 0 0 5 0.816 1 1 1 37.191 37.259 4 9.1363E-15 8375 20230619_1885_Aki_TMTPro18x_K_F5 192.24 174.44 102930 88756 82174 89356 92992 115100 112320 95605 112700 126990 121240 114270 123520 97802 99228 135330 113390 131030 95048 81265 85439 90560 96380 114010 112090 99874 115220 126270 124030 116050 124790 103460 102320 135030 108480 124430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 908680000 21118 4685 19763 39972;39973;39974 32070 32070 1 9606 Homo sapiens -0.045332901929441505 QELSQQQPQAGHCR Unmodified 1665.7642 0.76415019 3145 J3QQM4;Q9HAU4 SMURF2 E3 ubiquitin-protein ligase SMURF2 yes no 0 0 0 4 0 1 28.723 28.795 3 7.8409E-07 5169 20230619_1883_Aki_TMTPro18x_K_F4 129.71 117.15 3116.3 1021.9 2304 4869.6 5244.4 6117.2 4377.4 3650.1 5079.5 3862.9 3807.6 5477.4 4783.5 4912.3 4814.3 1828.9 5210.3 6975.6 2864.5 946.24 2468.9 4601.6 5196.9 6025 4479.4 3910 5084.2 3947.4 4022.2 5454 4858.8 4926.9 4900 1999.2 4993.6 6564.5 3 1 3 3 3 3 3 3 3 3 3 3 3 3 3 2 3 3 3990200 21119 3145 19764 39975 32071;32072;32073 32073 3 9606 Homo sapiens -0.04210132398520727 QELTSQAER Unmodified 1060.5149 0.51490158 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;H0YFY6;Q96HN5;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 2 0 1 33.213 33.271 2 2.8566E-06 6967 20230619_1881_Aki_TMTPro18x_K_F2 199.86 157.57 65295 32790 71761 78789 113430 132240 80523 104320 95897 58092 106640 141220 97219 103720 106550 40907 126590 112050 60281 30441 73028 76360 113710 128880 83646 107210 97086 63764 108760 138120 100110 104840 108900 46346 120830 105730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83235000 21120 349;3906 19765 39976 32074 32074 1 9606 Homo sapiens -0.012935272927734331 QEMFTCHHCGK Oxidation (M) 1449.5588 0.55877378 3013 G3XAG1;Q96ME7-3;Q96ME7;B4DES6;B7Z9P6;Q96ME7-2 ZNF512 Zinc finger protein 512 yes no 0 1 0 6 0 1 30.996 31.028 4 0.0043041 6145 20230619_1886_Aki_TMTPro18x_K_F6 77.744 69.25 11025 6158.5 10870 14834 15133 16369 17010 15758 19945 13716 14955 14710 15970 15102 14007 18576 20964 25261 10173 5714.1 11147 14265 15430 16404 17118 16092 19934 14017 15622 14916 16196 15755 14688 18966 20020 23907 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6218100 21121 3013 19766 39977 32075 32075 1774 1 9606 Homo sapiens -0.14802325453956655 QEMQEVQSSR Unmodified 1220.5455 0.54554978 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 2 0.816 1 1 1 33.825 33.866 2 1.6273E-13 7182 20230619_1881_Aki_TMTPro18x_K_F2 224.31 193.71 155960 88655 209530 192460 277170 328790 214520 278830 225520 185990 278670 341380 299110 267520 271770 132730 333280 289980 144340 82093 209320 187430 280900 320640 220550 285580 231110 197670 284750 336590 303400 271320 279400 144870 317980 273920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1460099999.9999998 21122 3491 19767 39978;39979;39980 32076;32077;32078 32077 3 9606 Homo sapiens -0.055901169700291575 QEMQEVQSSR Oxidation (M) 1236.5405 0.54046441 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 1 0 1.8 0.4 1 4 28.251 28.307 2 0.00099945 4914 20230619_1881_Aki_TMTPro18x_K_F2 109.16 89.803 51317 28439 70999 66846 95894 123520 71019 92413 77038 60831 99971 125900 98407 84145 95181 45592 117910 103830 47506 26376 70850 64997 97063 119740 73334 95640 78980 65150 101610 123290 100330 86168 97803 49875 112500 98051 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 98321000 21123 3491 19767 39981;39982;39983;39984;39985 32079;32080;32081;32082;32083 32080 2156 5 9606 Homo sapiens -0.06834420832660726 QENVLVICHQAVLR Unmodified 1677.8985 0.89845882 1324 H0Y483;F2Z2I2;B7Z8A0;Q5W015;Q5VX20;A0A1W2PR17;Q16875-3;Q16875-2;Q16875;Q16875-4 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes no 0 0 0 8 0 1 46.942 46.991 3 0.010305 12284 20230619_1888_Aki_TMTPro18x_K_F8 65.472 44.076 31458 23502 29030 30203 26725 32168 32151 34032 38013 33181 34322 29891 31872 23831 28756 32509 34252 28705 29054 21579 29668 29981 28121 32411 32291 34607 38228 33480 35246 30307 32443 25254 29618 32307 32680 27324 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10455000 21124 1324 19768 39986 32084 32084 1 9606 Homo sapiens 0.08662553094177383 QEPDPTW Unmodified 871.3712 0.37119746 2144 X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9;B4DM07 GTF2I General transcription factor II-I yes no 0 0 0 1 0 1 50.664 50.664 2 0.0075463 14587 20230619_1880_Aki_TMTPro18x_K_F1 124.34 118.68 66073 54479 65460 57262 51422 60106 63422 66731 66906 76412 79764 78524 92040 75922 74059 88999 94608 84646 61094 49907 66288 57701 54867 60734 63413 67956 68523 76746 81750 79557 92689 79099 76834 88945 90253 80480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62924000 21125 2144 19769 39987 32085 32085 1 9606 Homo sapiens -0.0696332933305257 QEPERNECFLSHK Unmodified 1672.7628 0.7627532 2776 CON__P02769 yes yes 0 0 1 4 0.816 1 1 1 37.191 37.254 4 1.0163E-05 8423 20230619_1883_Aki_TMTPro18x_K_F4 107.74 87.981 + 98449 163150 183050 103520 458560 635390 298880 291060 599350 200470 216010 333450 166290 229090 182640 292100 393420 665240 92263 148680 182810 116380 451670 593930 319270 318230 577110 212710 238190 328710 173210 243260 197760 312790 376260 626900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 415880000 21126 2776 19770 39988;39989;39990 32086;32087;32088 32087 3 9606 Homo sapiens -0.04671766487285822 QEPERNECFLSHKDDSPDLPK Unmodified 2540.1602 0.16016541 2776 CON__P02769 yes yes 0 0 2 5 0.816 1 1 1 43.789 43.862 5 2.3349E-18 11168 20230619_1883_Aki_TMTPro18x_K_F4 169.9 149.65 + 119050 338560 375940 141510 987670 1068600 571410 539590 677990 317590 308900 311820 180730 188560 319020 200950 274790 303090 113750 307720 368400 171730 965610 998430 602910 580810 669420 333810 328970 312510 195500 199250 318890 207820 263540 286690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 620490000 21127 2776 19771 39991;39992;39993 32089;32090;32091 32089 3 9606 Homo sapiens -0.048308266488675145 QEPLGSDSEGVNCLAYDEAIMAQQDR Unmodified 2895.2651 0.26510077 4350 Q96FW1;Q659F9;F5H6Q1;B4DPD5;F5GYJ8;F5H3F0 OTUB1;DKFZp564E242 Ubiquitin thioesterase OTUB1 yes no 0 0 0 1 0 1 61.188 61.188 3 2.5937E-49 18959 20230619_1880_Aki_TMTPro18x_K_F1 226.72 218.73 10880 11078 11270 9739.3 8735.6 11240 10860 11747 14675 14434 11845 11771 15332 13213 15334 16076 15915 16437 10079 10127 11370 9980.9 9349.3 11269 10949 12030 14630 14367 12442 12123 15542 13737 15629 16126 15226 15606 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31489000 21128 4350 19772 39994 32092 32092 1 9606 Homo sapiens -0.10672118025195232 QEPLGSDSEGVNCLAYDEAIMAQQDR Oxidation (M) 2911.26 0.26001539 4350 Q96FW1;Q659F9;F5H6Q1;B4DPD5;F5GYJ8;F5H3F0 OTUB1;DKFZp564E242 Ubiquitin thioesterase OTUB1 yes no 0 1 0 2.5 0.5 1 1 57.732 57.755 3 4.6442E-06 17620 20230619_1881_Aki_TMTPro18x_K_F2 92.499 84.602 6178 4509.7 6625.4 7253.1 5825 8034.9 5231 7162 7394.7 6426.3 7113.6 5866.2 6821.6 9197.7 6923 6661.7 27178 8590.2 5712.2 4152 6684.9 7104.7 6114.2 8037 5384.9 7352.5 7397.1 6524.2 7290.9 6099.4 7029.5 9233 8143.7 6846 25679 8206.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65220000 21129 4350 19772 39995;39996 32093 32093 2744 1 9606 Homo sapiens -0.11916421887781325 QEPLLIGSTK Unmodified 1084.6128 0.61282471 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 7 0.816 1 1 1 51.095 51.173 3 0.00011154 14062 20230619_1887_Aki_TMTPro18x_K_F7 127.87 113.71 275500 229670 252680 253010 224250 250330 243910 243050 295760 319950 349480 321190 349220 288040 297110 385600 348840 322870 254610 210470 258120 253690 235870 253280 246550 250900 300600 319250 355760 325100 353900 303310 306380 382170 333090 307420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 977360000 21130 3606 19773 39997;39998;39999 32094;32095 32095 2 9606 Homo sapiens 0.07390281303219126 QEPQPQGPPPAAGAVASYDYLVIGGGSGGLASAR Unmodified 3237.6055 0.60545451 3371 V9HW90;P00390-2;P00390-3;P00390;P00390-5;P00390-4;A0A2R8YF59 HEL-75;GSR Glutathione reductase, mitochondrial yes no 0 0 0 8 0 1 62.21 62.238 4 0.02971 18748 20230619_1888_Aki_TMTPro18x_K_F8 44.641 39.354 47007 58159 51619 50287 43849 28798 40681 54264 46773 56197 53985 51148 63396 42212 52435 41357 63677 53467 43640 53131 51889 51248 45915 31450 41472 53703 47663 56473 55434 51821 63803 43878 54061 42291 60747 50692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89539000 21131 3371 19774 40000 32096 32096 1 9606 Homo sapiens 0.07615599962582564 QEPSPKPNNK Unmodified 1137.5778 0.57783619 2481 Q8N684-3;Q8N684;Q8N684-2;B4DGF8;F5H669;F5H047;F5H6M0;J3QT54;C9J323;F5H5B7;F5H1W4;C9JM38;F5GXA3;F5H6A8;F5H6P5;F5H2K8;C9J286 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 0 0 1 7 0 1 34.086 34.167 3 0.0048011 6981 20230619_1887_Aki_TMTPro18x_K_F7 72.848 46.724 7674.2 4778.3 10338 9078.7 15638 18648 11468 13812 13719 8102.1 14134 15246 10224 11308 16528 4012 11469 8869.7 7105.9 4412.9 10354 8930.8 15720 18003 11882 14279 13839 8721.8 14329 15005 10868 11397 16346 4467.4 11004 8382.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4064600 21132 2481 19775 40001 32097 32097 1 9606 Homo sapiens 0.01455038495282679 QEPVKPEEGR Unmodified 1167.5884 0.58840088 220 P61586;A0A024R324;B4DKN9;A0A994J514;Q9BVT0;A0A7I2YQV1;A0A0B6XK12 RHOA;ARHA Transforming protein RhoA yes no 0 0 1 2.5 0.5 1 1 33.57 33.632 3 0.0014674 7117 20230619_1881_Aki_TMTPro18x_K_F2 93.011 71.615 160920 70905 184330 205680 216700 317630 179160 231940 279530 210100 319760 523500 379010 428280 243180 209130 563730 719360 148550 66146 185990 197700 222300 310190 186130 242260 280410 223230 329930 512960 379540 433470 267150 242270 537350 677270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 188240000 21133 220 19776 40002;40003 32098;32099 32098 2 9606 Homo sapiens 0.01131021149717526 QEPVRTDDGR Unmodified 1171.5582 0.55816338 3723 P62745;B4DMJ8 RHOB Rho-related GTP-binding protein RhoB yes no 0 0 1 1 0 1 26.358 26.358 3 0.069205 4613 20230619_1880_Aki_TMTPro18x_K_F1 39.625 16.795 2775.3 1600.4 2814.8 2675.1 5122.6 3218 4254.5 3927.3 2939.7 2790.6 5420.4 6319.7 2619.6 3958.3 2590.1 1368.3 6227.3 4571.9 2561.8 1475.9 2887.5 2620.5 5091.2 3233.6 4299.7 3934.7 3162.3 2984.7 5327.6 6166.7 2775.6 4017.7 2827.2 1601.4 5911.7 4314.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2502700 21134 3723 19777 40004 32100 32100 1 9606 Homo sapiens -0.020753375154754394 QEQFVDLYK Unmodified 1168.5764 0.57643921 466 A0A024R7P3;A0A024R7N2;Q9HD20-2;Q9HD20;Q8NC73;Q6ZUA1;Q9HD20-3;Q8TEG5 ATP13A1;FLJ00232 Manganese-transporting ATPase 13A1 yes no 0 0 0 5 0 1 54.766 54.833 3 0.020708 15740 20230619_1885_Aki_TMTPro18x_K_F5 63.408 37.971 31715 20564 26953 27073 27287 33713 32697 31615 37522 34323 36965 35766 39333 31988 38990 44224 37277 36051 29252 18898 27788 26893 28506 33524 32800 32512 37920 34596 38054 36143 40040 33760 39589 43774 35675 34333 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96643000 21135 466 19778 40005 32101 32101 1 9606 Homo sapiens -0.001105955934690428 QEQHEAQAQVAELELQLR Unmodified 2119.0658 0.065794739 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 3 0 1 52.658 52.717 3 3.1848E-30 15341 20230619_1882_Aki_TMTPro18x_K_F3 221.79 201.88 34908 35842 40583 42418 43129 53582 42495 42759 47788 39308 51844 47966 52349 46720 54099 58776 49969 52803 32373 32845 40809 42439 44615 53074 43065 44344 48506 40206 53009 48324 53501 48844 54781 58527 47869 50206 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 744820000 21136 349;3906 19779 40006 32102 32102 1 9606 Homo sapiens 0.05102447382023456 QEQIDNQTR Unmodified 1130.5316 0.53161428 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;B4DGT1;A0A994J498;Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 29.947 29.982 2 0.0044685 5703 20230619_1881_Aki_TMTPro18x_K_F2 98.943 68.688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21137 1022;3868 19780 40007;40008 32103;32104 32104 2 9606 Homo sapiens -0.02843026406799254 QEQIINTMTQDLR Unmodified 1588.7879 0.78790532 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 5.33 0.471 2 1 57.63 57.694 2 1.3255E-07 17179 20230619_1886_Aki_TMTPro18x_K_F6 177.1 123.42 35380 27662 31538 36305 33918 37949 37271 35790 42225 40224 35448 41849 45662 36236 39022 46756 43480 49099 32677 25400 32423 35966 35149 38196 37532 36841 42490 40469 37181 42205 45953 38137 40087 46922 41597 46589 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 279620000 21138 3440 19781 40009;40010;40011 32105;32106 32106 2 9606 Homo sapiens 0.017062883153130315 QEQINCVTR Unmodified 1146.5452 0.54515585 2814 D3DS96;Q9NRL2-2;Q9NRL2;Q59G54 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 0 0 0 4 0 1 34.852 34.903 2 0.0016379 7513 20230619_1883_Aki_TMTPro18x_K_F4 113.93 90.498 21150 9743.1 20087 23078 23965 30385 20760 22620 29084 24282 24401 29156 29499 19967 23083 19219 35152 24270 19496 9047.7 20572 22269 24550 29955 21380 23686 28972 24610 25503 29027 29620 20888 24222 19625 33441 23038 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14337000 21139 2814 19782 40012 32107 32107 1 9606 Homo sapiens -0.02225491899230292 QEQLETAR Unmodified 973.48287 0.48287317 1181 Q53T76;A8K1Z2;A0A140VJK2;P43304;B7Z601;P43304-2 GPD2 Glycerol-3-phosphate dehydrogenase;Glycerol-3-phosphate dehydrogenase, mitochondrial yes no 0 0 0 2 0 1 32.325 32.385 2 0.030118 6611 20230619_1881_Aki_TMTPro18x_K_F2 85.731 71.064 7702.8 6709 9614.6 9618.6 19262 19002 11931 17003 14702 5710 14754 16234 12911 12451 15474 7212.9 15932 14750 7140 6163.9 9749.3 9593.1 19029 18452 12551 17187 14785 6707.2 15070 15876 13366 12687 15668 7783.6 15231 13934 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7923700 21140 1181 19783 40013 32108 32108 1 9606 Homo sapiens -0.0049289497588915765 QEQQAFK Unmodified 877.42938 0.42938104 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 4 0 1 38.431 38.474 2 0.009461 8932 20230619_1883_Aki_TMTPro18x_K_F4 119.29 68.325 27008 11806 25952 28872 45956 51703 33709 46152 41127 22431 40746 50372 30713 31753 45931 18315 47514 47792 24893 10974 26770 28012 45847 50368 34950 46853 41378 24801 41477 49192 32428 32654 46368 20361 45448 45079 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11041000 21141 673 19784 40014 32109 32109 1 9606 Homo sapiens -0.014236476877613313 QEQSYFVR Unmodified 1055.5036 0.50360861 1189 A0A140VJN8;O60664-4;O60664-3;O60664;O60664-2 PLIN3 Perilipin-3 yes no 0 0 0 4.5 0.5 1 1 41.092 41.157 2 0.00099257 9995 20230619_1885_Aki_TMTPro18x_K_F5 164.53 78.061 155480 116560 154700 150440 188920 203560 182600 181800 209750 198780 235520 232450 234720 192620 207250 231470 271670 239500 143690 107030 157700 149840 193340 201300 185340 187640 213130 201030 240350 233160 238280 202080 214900 232370 259090 227510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 165820000 21142 1189 19785 40015;40016 32110 32110 1 9606 Homo sapiens -0.021923045962239485 QEQVTAAVAHAVEQQMQK Unmodified 1994.9844 0.9843733 3142 J3QK89;Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes no 0 0 0 4.5 3.5 1 1 58.907 58.949 3 5.4088E-14 17392 20230619_1888_Aki_TMTPro18x_K_F8 160.55 143.33 129200 111890 111530 146750 98112 130390 152780 146790 126800 145860 155980 153000 157000 138730 149260 169980 177170 154210 119370 102700 114830 145080 104550 133390 150070 148860 131840 147590 158720 154580 159890 145170 153550 169390 169090 146720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113600000 21143 3142 19786 40017;40018 32111;32112 32112 2 9606 Homo sapiens 0.026680484183771114 QEREDELR Unmodified 1073.5102 0.51015055 921 K7EP11;F5H0Q6;B3KSZ8;A0A0A0MQS2;Q8N2M8-4;Q8N2M8 CLASRP CLK4-associating serine/arginine rich protein yes no 0 0 1 1 0 1 27.515 27.515 3 0.056988 5029 20230619_1880_Aki_TMTPro18x_K_F1 57.032 21.808 28158 15315 26033 32600 34557 38853 29518 36534 40961 35728 44280 45907 47287 40344 33288 29702 57339 47750 25967 14180 26787 31541 35118 38724 30427 37444 41198 36471 45393 45923 47522 41261 35394 31047 54563 45197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16206000 21144 921 19787 40019 32113 32113 1 9606 Homo sapiens -0.023664114355369747 QERYEIEETETVTK Unmodified 1753.837 0.83702358 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;C9J813;Q6PJM5;Q6P707 CALD1 Caldesmon yes no 0 0 1 2 0 1 43.439 43.521 3 0.00046747 11455 20230619_1881_Aki_TMTPro18x_K_F2 101.2 80.675 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21145 3798 19788 40020 32114 32114 1 9606 Homo sapiens -0.009741449148123138 QESASSSYFVAPR Unmodified 1427.6681 0.66810776 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;Q9UMS6;Q9UMS6-3;B4DLE4;Q9UMS6-5 SYNPO2 Synaptopodin-2 yes no 0 0 0 6 0 1 44.332 44.423 2 0.016373 11422 20230619_1886_Aki_TMTPro18x_K_F6 80.979 45.02 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21146 4686 19789 40021 32115 32115 1 9606 Homo sapiens -0.0286195696694449 QESENSCNK Unmodified 1094.4299 0.42985132 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DQN8;B4DM27 PRRC2C Protein PRRC2C yes no 0 0 0 6.5 0.5 1 1 41.117 41.2 3 0.07124 9764 20230619_1887_Aki_TMTPro18x_K_F7 42.19 20.743 684160 405460 501180 447920 883540 1118600 747280 663320 1425000 188670 179970 173660 194940 149880 351720 197030 209250 178690 630130 372140 530000 457440 886900 1069200 780540 696120 1359800 218840 243980 176660 206380 157950 346160 196720 201380 170030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 355500000 21147 2894 19790 40022;40023 32116 32116 1 9606 Homo sapiens -0.11358640820890287 QESENSCNKEEEPVFTR Unmodified 2081.896 0.8960118 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DQN8;B4DM27 PRRC2C Protein PRRC2C yes no 0 0 1 2 0 1 40.043 40.113 3 2.8117E-07 9856 20230619_1881_Aki_TMTPro18x_K_F2 199.65 172.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21148 2894 19791 40024 32117 32117 1 9606 Homo sapiens -0.10166036682767299 QESTEYR Unmodified 911.39847 0.39847484 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 0 0 1 0 1 28.561 28.561 2 0.020832 5410 20230619_1880_Aki_TMTPro18x_K_F1 110.12 79.402 11250 3596.9 16929 16345 59832 60442 27230 46134 22842 10435 36975 53653 15456 32747 42541 3945.4 39252 34547 10406 3408.3 17358 15992 57809 57401 29254 47078 24022 13766 36490 51718 17868 32859 42381 6279.7 37555 32506 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32947000 21149 3414 19792 40025 32118 32118 1 9606 Homo sapiens -0.060768457926542396 QESTEYRR Unmodified 1067.4996 0.49958587 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 0 1 2.5 0.5 1 1 23.036 23.148 3 0.061204 3776 20230619_1882_Aki_TMTPro18x_K_F3 43.982 24.195 255140 273770 364450 324620 578170 635430 449120 550600 545450 315280 457930 434430 320630 348040 435650 247710 493650 364490 237220 250860 364140 327780 579990 616870 463430 561440 545820 335230 467960 432740 337690 356280 443060 257780 470870 345430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342760000 21150 3414 19793 40026;40027 32119 32119 1 9606 Homo sapiens -0.031463940899584486 QETELSPEMISSGSWR Unmodified 1835.836 0.83597772 4109 Q6IBR2;Q9Y285;K7ER00;K7ER16;K7EPH2 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 4 0 1 56.428 56.437 3 4.8003E-15 16832 20230619_1883_Aki_TMTPro18x_K_F4 159.88 130.92 46716 38382 45714 49881 46766 55619 47645 47510 59483 55720 48362 49106 58123 38180 54322 55083 46556 54600 43191 35233 46563 49490 48569 55608 48358 49318 59515 55682 50580 49772 58745 40699 54883 55050 44675 51835 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85470000 21151 4109 19794 40028 32120 32120 1 9606 Homo sapiens -0.04850682555320418 QETEVELYNEFPEPIK Unmodified 1963.9415 0.94148865 1257 A0A158RFU6;P51149;C9J8S3;A0A6Q8PGE6;B4DPH9;C9J4V0;C9J4S4 RAB7A Ras-related protein Rab-7a yes no 0 0 0 2 0.816 1 1 1 61.66 61.673 4 0.083526 19135 20230619_1882_Aki_TMTPro18x_K_F3 42.277 31.9 32321 20115 29642 32907 32073 31599 27828 32858 38939 33857 39544 30796 38260 28657 36982 28213 33719 40342 29821 18537 30378 32147 33008 32075 28672 33498 39048 34079 40424 31350 38991 29654 37401 29064 32340 38164 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80839000 21152 1257 19795 40029;40030;40031 32121 32121 1 9606 Homo sapiens -0.0019244315810738044 QETFDAGLQAFQQEGIANITALK Unmodified 2492.2547 0.25471772 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q14917;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 7.5 0.5 1 1 64.679 64.702 3 2.9136E-13 19977 20230619_1887_Aki_TMTPro18x_K_F7 129.92 120.75 45674 33934 43450 44575 34675 41816 46330 48437 55305 56531 54948 69323 71183 64157 60010 76370 70457 82407 42192 31165 44203 44116 37067 42633 46333 49246 55846 57082 57201 69597 71640 66980 61889 76835 67395 78163 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174390000 21153 1022;3868 19796 40032;40033 32122 32122 1 9606 Homo sapiens 0.06828055164805846 QETVDCLKK Unmodified 1119.5594 0.55940893 1836 E9PBG7;Q13557-6;A0A994J5B0;D6R938;A0A8V8TNA7;A0A8V8TN65;A0A8V8TND4;Q13557-10;Q13557-8;E9PF82;Q13557-11;Q13557;B7Z2B0;A0A8V8TPK3;Q13557-3;A0A8V8TN88;A0A994J516;A0A8V8TN60;A0A8V8TPY4;A0A8V8TPJ8;A0A8V8TNA1;A0A994J7X8;Q13557-12;Q13557-5;Q13557-9;Q13557-4;A0A8V8TPM4;Q4G1A8;A0A8V8TNN9;H0Y9C2;A8K161;A0A5F9ZHR5;A0A5F9ZH50;D6RFJ0;A0A5K1VW76;A0A5F9ZHY2;A0A804HIC9;Q9UQM7;Q9UQM7-2;Q8IWE0;Q7LDD5;A0A5F9ZH21;A0A5F9ZHM9 CAMK2D;CAMK2A Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 1 7 0 1 42.465 42.54 3 0.0043467 10290 20230619_1887_Aki_TMTPro18x_K_F7 79.23 38.734 72251 47469 82333 62415 86962 78752 88615 89726 93783 89200 113350 102090 97721 76267 118620 52666 105640 73998 66804 43620 82729 62079 89830 78679 89457 90857 95976 90536 114660 102120 101140 78331 119150 54739 100990 70174 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51195000 21154 1836 19797 40034 32123 32123 1 9606 Homo sapiens 0.004411605290670195 QETVECLR Unmodified 1033.4862 0.48624399 1721 A0A8V8TQ77;A0A804CJ50 no no 0 0 0 3 0 1 38.263 38.316 2 0.0045736 8898 20230619_1882_Aki_TMTPro18x_K_F3 116.05 93.221 35221 28305 31739 34006 34091 32455 31983 33572 45051 34566 45862 43356 41723 37042 35560 40415 51945 42441 32537 25964 32568 33860 35160 32982 32786 34256 45136 35168 46803 43420 42448 38585 37195 40663 49476 40324 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27982000 21155 1721 19798 40035 32124 32124 1 9606 Homo sapiens -0.02915968193565277 QEVCIHDLQAHNK Unmodified 1590.7573 0.75727389 696 A0A804HJZ5;A0A2R8YFW3;Q59F53;A0A024RBV9;O60907-2;O60907 TBL1X F-box-like/WD repeat-containing protein TBL1X yes no 0 0 0 5 0 1 38.199 38.291 4 5.5448E-05 8816 20230619_1885_Aki_TMTPro18x_K_F5 114.74 93.37 47766 33304 43363 50508 52719 59472 52997 50715 58787 57555 64243 56982 56528 51685 57580 59702 66679 63625 44093 30646 44602 49673 54050 59234 53596 52604 59773 57796 65275 57721 58019 53907 59045 60083 63689 60401 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21855000 21156 696 19799 40036 32125;32126 32126 2 9606 Homo sapiens -0.01447445279063686 QEVCQSYK Unmodified 1040.4597 0.45969489 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;Q6ZP35;E7EMC6;E5RJF5;E5RK63;A0A0S2Z301;E5RI05;E5RFF0;E5RIU8;E5RJR0;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 0 5 0 1 38.356 38.449 2 0.002618 8895 20230619_1885_Aki_TMTPro18x_K_F5 123.86 66.579 19229 11397 25170 25083 37482 47688 23926 37783 27735 14550 30493 29660 21081 20624 36160 10532 33874 29147 17795 10553 25261 24467 37637 46220 25075 38610 28087 16421 30765 29123 22545 21044 36231 11871 32399 27504 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17796000 21157 1062;1064 19800 40037 32127 32127 1 9606 Homo sapiens -0.058916570848850824 QEVEEWVASGNK Unmodified 1374.6416 0.64155866 1651 A0A7I2V2U6;B2R7W0;P13995;B8ZZU9;B9A062 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes no 0 0 0 4 0 1 53.704 53.724 3 0.047214 15699 20230619_1883_Aki_TMTPro18x_K_F4 45.825 30.438 189280 183790 194040 189890 171150 220390 212680 205840 251990 250970 226980 234810 259650 221390 240660 254110 237750 246690 175260 168250 196400 191790 180980 220220 213260 212480 253600 250780 235570 238590 263060 230560 244970 254410 227570 234360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57170000 21158 1651 19801 40038 32128 32128 1 9606 Homo sapiens -0.030776458582977284 QEVISTSSK Unmodified 977.50294 0.50293991 2907 P63244;E9KL35;J3KPE3;H0Y8W2;D6RAC2;H0YAF8;D6REE5;H0YAM7;D6RF23;H0Y9P0;D6RHJ5 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 5.5 0.5 1 1 39.885 39.974 2 6.984E-05 9495 20230619_1885_Aki_TMTPro18x_K_F5 160.53 142.67 107290 50666 109290 117980 128480 198730 122120 164140 179550 111090 172520 264460 195140 211890 130810 98110 296000 290280 98960 47027 111270 114500 132330 193690 125370 168550 179080 119900 178840 259260 195880 214270 143030 111300 281570 273690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69250000 21159 2907 19802 40039;40040 32129;32130 32129 2 9606 Homo sapiens 0.013288559640500353 QEVPSWLENMAYEHHYK Oxidation (M) 2175.9684 0.96838888 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A024R9A4;Q5S4N1;B4E132;A0A0J9YVQ7;A0A087WVZ1 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 1 0 5.5 0.5 1 1 50.561 50.637 4 4.0557E-10 14151 20230619_1886_Aki_TMTPro18x_K_F6 144.5 131.82 45544 39326 42111 47602 45808 51241 44365 51725 53856 58430 58171 56834 67462 51728 52196 69856 57944 64716 42102 36066 43148 47442 47278 51552 45142 52963 54546 58631 59861 57625 67792 54508 53764 69564 55432 61497 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128270000 21160 1018 19803 40041;40042 32131 32131 578 1 9606 Homo sapiens -0.0725565781849582 QEVQNLIK Unmodified 970.54475 0.54474515 1217 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 7 0 1 48.817 48.904 3 0.00091676 13089 20230619_1887_Aki_TMTPro18x_K_F7 112.41 16.596 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21161 1217 19804 40043 32132 32132 1 9606 Homo sapiens 0.058294564432458174 QEYDESGPSIVHR Unmodified 1515.6954 0.69538514 3112;3679;4827;4132 P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;Q96FU6;Q96DE1;A0A2R8YFE2;L0R5C4;Q9BYX7;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;Q6S8J3;A5A3E0;P0CG38;P0CG39;V9HVZ7 ACTG1;POTEM;POTEKP;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;POTEJ;HEL-176 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J no no 0 0 0 3.5 1.71 1 1 1 1 1 1 37.198 37.251 3 1.1056000000000002E-56 8420 20230619_1883_Aki_TMTPro18x_K_F4 316.65 282.69 405690 264490 374250 461590 534580 675640 481380 528450 654210 585900 580110 664160 681810 526930 480970 629550 692760 755240 374410 243910 385850 452160 542230 662980 493730 551300 653880 591650 603410 665690 682960 553920 505120 637530 661220 715770 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 8014499999.999999 21162 3112;3679;4132;4827 19805 40044;40045;40046;40047;40048;40049 32133;32134;32135;32136;32137 32136 5 9606 Homo sapiens -0.04183473426587625 QEYDESGPSIVHRK Unmodified 1643.7903 0.79034816 3112;3679;4827;4132 P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;Q96FU6;Q96DE1;A0A2R8YFE2;L0R5C4;Q9BYX7;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;Q6S8J3;A5A3E0;P0CG38;P0CG39;V9HVZ7 ACTG1;POTEM;POTEKP;ACTB;PS1TP5BP1;POTEE;POTEF;POTEI;POTEJ;HEL-176 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J no no 0 0 1 4 0 1 36.436 36.482 4 1.0175E-06 8114 20230619_1883_Aki_TMTPro18x_K_F4 130.66 112.96 70911 72548 83565 76176 127980 77850 89461 109090 71173 86123 85844 64731 81449 62910 80879 87123 102580 73473 65769 66411 84368 76755 127780 79511 91966 108580 74277 87516 87077 66744 83217 66267 83473 86382 97738 70037 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205230000 21163 3112;3679;4132;4827 19806 40050 32138 32138 1 9606 Homo sapiens -0.005795399554244796 QEYLDTLYR Unmodified 1199.5823 0.58225287 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;A0A7I2V3I2;H0YBP5;A0A7I2V4G3;E5RGA2;A0A7I2V5P9;A0A161SXE1;A0A7I2V570;A0A7I2V429;H0YBR5;A0A7I2V5K7 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 0 4.5 0.5 1 1 52.041 52.09 2 0.00010125 14668 20230619_1885_Aki_TMTPro18x_K_F5 155.42 113.33 340170 247920 298570 388710 323020 430350 393350 393420 478800 487920 484130 549260 597190 458510 527050 624170 611140 642760 314010 228180 307810 381180 336270 430780 395100 407030 483360 489910 501860 551710 602340 484950 542350 625270 584150 610190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 415760000 21164 1659 19807 40051;40052 32139 32139 1 9606 Homo sapiens -0.009554970818271613 QEYVDYSESAKK Unmodified 1445.6674 0.66743906 1807 O60832;A0A8Q3WLC8;A0A8Q3SIS9;A0A8Q3SJE8;A0A8Q3WLD1;A0A8Q3WLG7;A0A8V8TKY9 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 0 0 1 4.5 0.5 1 1 43.704 43.766 3 2.0582E-05 11103 20230619_1885_Aki_TMTPro18x_K_F5 126.71 107.49 112020 91834 100620 104060 136600 136470 139000 131830 123120 145480 163760 143270 157400 112790 149490 139120 140660 104690 103500 84185 103720 104540 138940 135490 139520 135330 128040 146150 165710 144560 160270 118780 151590 137520 134420 99929 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147120000 21165 1807 19808 40053;40054 32140 32140 1 9606 Homo sapiens -0.03756796406673857 QFAEMYVAK Oxidation (M) 1101.5165 0.51648149 3447 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 1 0 7 0.816 1 1 1 48.828 48.91 2;3 0.0014386 13050 20230619_1887_Aki_TMTPro18x_K_F7 91.265 76.063 230610 164830 200270 201160 204040 211510 211750 184030 223740 213790 238170 186670 210770 173550 188570 233200 217190 200350 212840 151290 205990 200330 211800 212540 213440 190810 227790 213710 242110 190530 214900 182610 193970 231420 207410 190710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 411380000 21166 3447 19809 40055;40056;40057 32141;32142 32141 2093 2 9606 Homo sapiens -0.030216095283776667 QFAEMYVAK Unmodified 1085.5216 0.52156686 3447 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 0 0 7.5 0.5 1 1 53.889 53.958 3 0.0037955 15213 20230619_1888_Aki_TMTPro18x_K_F8 72.006 53.694 189880 149090 175070 166130 150720 177480 192700 179760 193100 191470 191830 162800 217780 165130 179640 208010 201840 160260 175420 136670 178670 166630 159690 178680 191900 183820 196680 192020 197810 166820 219500 172570 184710 205610 192620 152870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1595899999.9999998 21167 3447 19809 40058;40059 32143 32143 1 9606 Homo sapiens -0.017773056657460984 QFAFVHMR Oxidation (M) 1050.5069 0.50691985 1111 A0A0S2Z4Z0;Q96PK6;A0A0S2Z567;Q96PK6-2;A0A0A6YYI9;A0A0S2Z5V2;F8WDX3;A0A0A0MSL8;B8ZZ74;Q96PK6-3;Q96PK6-4 RBM14;RBM14-RBM4 RNA-binding protein 14 no no 0 1 0 3 0 1 39.843 39.9 3 0.0047889 9558 20230619_1882_Aki_TMTPro18x_K_F3 87.181 63.862 49038 51830 58224 53930 68735 81311 68459 71847 78797 46164 51936 51082 57928 47892 50789 54926 65548 61297 45497 47437 58527 54681 70582 79920 69353 73333 78521 48248 54809 51572 58614 49896 52604 55427 62544 58168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42574000 21168 1111 19810 40060 32144 32144 684 1 9606 Homo sapiens -0.016313330232378576 QFAFVHMR Unmodified 1034.512 0.51200523 1111 A0A0S2Z4Z0;Q96PK6;A0A0S2Z567;Q96PK6-2;A0A0A6YYI9;A0A0S2Z5V2;F8WDX3;A0A0A0MSL8;B8ZZ74;Q96PK6-3;Q96PK6-4 RBM14;RBM14-RBM4 RNA-binding protein 14 no no 0 0 0 4.5 0.5 1 1 45.712 45.772 3 4.776E-05 12067 20230619_1883_Aki_TMTPro18x_K_F4 147.16 133.16 58285 48941 54563 53481 57256 73926 62519 60566 82227 43929 51972 49522 53716 45082 45563 46595 58566 58140 53875 44846 55786 53919 59527 72876 63314 62353 81308 45551 54796 49897 54404 46751 47195 47444 55907 55101 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57773000 21169 1111 19810 40061;40062 32145 32145 1 9606 Homo sapiens -0.0038702916060628922 QFAPEYEK Unmodified 1010.4709 0.4709115 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 3.43 1.4 1 1 1 2 2 46.339 46.396 2;3 0.010619 12386 20230619_1883_Aki_TMTPro18x_K_F4 104.17 61.14 417180 333500 363750 416630 469800 519960 489470 466870 597230 541050 655980 655910 653030 512980 530200 704180 724070 677380 385290 306040 375920 415180 480400 516710 495580 482650 604370 546440 669950 656120 660620 544020 552950 702520 690580 643840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 972670000 21170 909 19811 40063;40064;40065;40066;40067;40068;40069 32146;32147 32146 2 9606 Homo sapiens -0.033905117191011414 QFAYQNSWGLTTR Unmodified 1570.7528 0.75284044 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 4 0 1 54.858 54.87 2 2.4377E-27 16165 20230619_1883_Aki_TMTPro18x_K_F4 278.51 230.07 60799 52503 60798 60613 56857 72895 64998 60831 66762 73057 70348 69205 73966 62411 78919 74756 73147 79264 56239 48130 61714 60716 59659 72490 65134 63313 68103 73061 72188 70197 75596 65274 79823 75192 70084 75215 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67745000 21171 3402 19812 40070 32148 32148 1 9606 Homo sapiens -0.009705864303668932 QFCFNCGENWHDPVK Unmodified 1936.7985 0.79848678 4741 Q9Y4X5;Q59FM8 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes no 0 0 0 7 0 1 53.074 53.145 3 0.0048575 14982 20230619_1887_Aki_TMTPro18x_K_F7 69.331 64.226 78558 69254 74782 76649 81446 81299 79966 82963 81822 104460 102240 95434 109240 77710 94637 115070 99160 102160 72647 63456 76375 76898 83961 81949 80820 85194 84195 104080 104190 96732 110450 82781 96857 114240 94853 97162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39818000 21172 4741 19813 40071 32149 32149 1 9606 Homo sapiens -0.13244052301911324 QFCLQNAQHDPLLTGVSSSTNPFRPQK Unmodified 3069.5091 0.5090517 3741 P63218;A0A804HLA8 GNG5 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 yes no 0 0 1 4 0 1 56.132 56.14 4 1.3186E-13 16745 20230619_1883_Aki_TMTPro18x_K_F4 134.68 123.48 28078 23395 26893 34145 20730 21456 27487 27648 25509 27756 25933 28516 28647 25805 22332 32150 29877 28100 25957 21502 27366 33421 22181 22799 27276 27845 26133 28053 26722 28822 28868 27029 23290 31952 28501 26739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70192000 21173 3741 19814 40072 32150 32150 1 9606 Homo sapiens 0.05707753921615222 QFCSTQAALQAMER Unmodified 1639.7447 0.7446603 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 7 0 1 53.224 53.294 3 4.8037E-07 15052 20230619_1887_Aki_TMTPro18x_K_F7 107.82 102.34 55945 49760 56656 61610 52137 65688 62726 60004 73983 68228 63918 57001 69876 59477 62546 74816 69605 68974 51764 45642 57469 61294 54870 65967 62976 61921 74334 68202 66268 58501 70790 62088 64188 74575 66525 65576 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127830000 21174 349;3906 19815 40073 32151 32151 1 9606 Homo sapiens -0.049622247336401415 QFCTGEFR Unmodified 1043.4495 0.44946455 3257 Q6FH57;Q6FH36;O43447;C9JQD4;A0A7I2V5V0;A0A7I2V343;A0A7I2V2H6 PPIH Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase H yes no 0 0 0 5.5 0.5 1 1 43.947 44.033 2 0.0025947 11233 20230619_1886_Aki_TMTPro18x_K_F6 124.23 92.01 270140 196420 232190 275830 251160 290540 279200 264350 310090 282950 306520 330460 333170 264250 279320 329790 361390 374680 249320 180550 239600 272080 260350 291980 280820 272490 313960 286450 315960 331060 336590 278370 289780 332700 345080 355350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 454350000 21175 3257 19816 40074;40075 32152;32153 32153 2 9606 Homo sapiens -0.0705222001945458 QFDHPHIVK Unmodified 1119.5825 0.58252764 790 Q05397-7;E7ESA6;Q658W2;A0A059VC25;H0YBP1;A0A8Q3WLM4;Q05397;Q05397-5;Q59GN8;Q59GM6;Q05397-2;I6L996;E9PEI4;B4DH13;H0YBZ1;Q8N9D7;H0YB16;A0A024R9H6;Q05397-4;Q05397-3;E5RJI4 PTK2;DKFZp666O0110;FAK Focal adhesion kinase 1 yes no 0 0 0 7.5 0.5 1 1 38.195 38.22 4 0.0035083 8537 20230619_1887_Aki_TMTPro18x_K_F7 77.379 53.036 116460 77089 114860 122690 126550 133840 126940 121760 140430 159820 165030 173120 174370 141480 136230 167950 184860 168460 107550 70996 117030 120240 130490 134190 128420 126270 143400 159850 168590 174010 175840 148410 142040 168290 176280 160060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123780000 21176 790 19817 40076;40077 32154;32155 32154 2 9606 Homo sapiens 0.027519674287077578 QFDNLKPSGGYITGDQAR Unmodified 1965.9545 0.95445338 1388 F8W719;Q6PJ79;E7EPJ2;Q8IWI5;Q53TK4;A6H8W8;A0A2X0SSM1;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3 ITSN2 Intersectin-2 yes no 0 0 1 8 0 1 49.029 49.096 3 6.7645E-05 13140 20230619_1888_Aki_TMTPro18x_K_F8 87.668 79.068 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21177 1388 19818 40078 32156 32156 1 9606 Homo sapiens 0.010114327446899551 QFEDELHPDLK Unmodified 1369.6514 0.65139506 737 A0A024RCX8;Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase-like 1 yes no 0 0 0 2.5 1.12 1 1 1 1 49.477 49.52 3 0.00030164 14242 20230619_1881_Aki_TMTPro18x_K_F2 102.52 73.179 536010 435260 491030 542100 527680 619320 603490 608110 673720 610680 661910 671260 698210 579620 638360 688810 723200 714840 495270 399390 503500 539680 547650 620010 606260 622060 681730 618950 681350 675710 708570 606770 655130 691770 691070 678710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 742340000 21178 737 19819 40079;40080;40081;40082 32157;32158 32157 2 9606 Homo sapiens -0.018644578529119826 QFEHLDPQNQHTFEAR Unmodified 1995.9187 0.91873657 2110 Q53GX6;A8K7Q1;Q02818;C9JKZ2 NUCB1 Nucleobindin-1 yes no 0 0 0 3.5 0.5 1 1 40.721 40.772 4 1.4718E-14 9887 20230619_1883_Aki_TMTPro18x_K_F4 184.01 165.18 93914 84470 102050 108170 107540 126030 126210 116120 140570 117020 129030 128740 125440 102580 114880 135800 152360 141340 86955 77502 103130 107510 111800 125830 126580 119370 141830 118620 132760 129320 127660 108450 119180 136170 145340 134230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136260000 21179 2110 19820 40083;40084 32159;32160 32160 2 9606 Homo sapiens -0.03938604712288907 QFELSEQTK Unmodified 1108.5401 0.5400537 2876 G5EA19;U3KQS5;E5RG17;Q6P1N9;H0YBX2;E5RGF2;A0A0D9SGD3;Q6P1N9-2;E5RG62;E5RK70 TATDN1 Putative deoxyribonuclease TATDN1 yes no 0 0 0 4 0 1 47.266 47.308 2 2.6706E-06 12728 20230619_1883_Aki_TMTPro18x_K_F4 188.87 118.35 90010 73431 82261 87782 102570 105000 95136 93506 108500 105910 114540 126310 122130 97647 104330 134350 136310 126360 83169 67351 84533 87698 104700 104640 96776 96660 110050 106990 117630 126330 123550 103610 108330 133880 130040 120140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86758000 21180 2876 19821 40085 32161 32161 1 9606 Homo sapiens -0.009874724901919762 QFEPNDFYLK Unmodified 1299.6136 0.61355299 1600 Q6DHZ8;B2RBM8;A0A669KBJ7;Q9H2P0;A0A2R8YCL6 ADNP Activity-dependent neuroprotector homeobox protein yes no 0 0 0 6 0 1 59.122 59.188 2 0.025457 17780 20230619_1886_Aki_TMTPro18x_K_F6 72.848 44.616 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21181 1600 19822 40086 32162 32162 1 9606 Homo sapiens -0.02426924047722423 QFFPFGDPTK Unmodified 1182.571 0.5709599 509 A0A024R8B2;P62166-2;P62166 FREQ;NCS1 Neuronal calcium sensor 1 yes no 0 0 0 2 0 1 61.896 61.906 3 0.032105 19372 20230619_1881_Aki_TMTPro18x_K_F2 42.809 17.965 69465 56958 72128 76475 58372 78446 67563 73075 85285 92348 79308 93457 111740 89151 79999 115800 106430 119130 64254 52304 72878 75639 62099 79009 68182 75535 85743 92333 83138 94662 111500 93554 83565 116000 101660 113070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55860000 21182 509 19823 40087 32163 32163 1 9606 Homo sapiens -0.013022743852843632 QFFVAVER Unmodified 994.52362 0.52361577 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 0 7.5 0.5 1 1 52.372 52.448 2 0.01487 14594 20230619_1888_Aki_TMTPro18x_K_F8 104.06 72.753 432570 315210 415470 481880 381120 587530 453520 469440 636460 589140 569410 655420 728670 540970 494120 706230 709450 780670 399590 290020 423570 473930 402240 582730 458760 490920 635460 591240 594590 658280 727180 571010 519640 710480 677200 740440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 390920000 21183 543 19824 40088;40089 32164 32164 1 9606 Homo sapiens 0.026134911343774547 QFGAQANVIGPWIQTK Unmodified 1756.9261 0.92605378 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;B4DFY0;B3KUX9;A1L0V1;B7Z2W3;H0YJW3;H0YJ11 ACTN1 Alpha-actinin-1 yes no 0 0 0 4.5 0.5 1 1 61.897 61.924 3 0.00044769 19125 20230619_1883_Aki_TMTPro18x_K_F4 80.411 46.73 211110 186200 160570 163530 180010 197200 205000 208500 188950 270680 244560 243040 258680 224650 228830 267530 231270 299420 194920 170300 167630 167660 186150 197280 204810 213780 196030 269200 248920 247310 262120 234700 233600 269810 221720 283800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2020599999.9999998 21184 387 19825 40090;40091 32165 32165 1 9606 Homo sapiens 0.0778677962605343 QFGIDGESFELK Unmodified 1368.6561 0.65614609 4708 Q9Y2P8 RCL1 RNA 3'-terminal phosphate cyclase-like protein yes yes 0 0 0 5 0 1 61.173 61.224 2 0.017767 18407 20230619_1885_Aki_TMTPro18x_K_F5 70.1 43.502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21185 4708 19826 40092 32166 32166 1 9606 Homo sapiens -0.013435737101417544 QFHNEVLK Unmodified 1013.5294 0.52942943 2812 Q5VZR0;D3DRP5;Q9H4G4;B4DQC5;A0A088AWP7 GLIPR2;C9orf19 Golgi-associated plant pathogenesis-related protein 1 yes no 0 0 0 6.5 0.5 1 1 40.184 40.263 3 0.0035992 9355 20230619_1887_Aki_TMTPro18x_K_F7 88.496 32.928 162860 97088 144020 151140 155370 165940 186310 182830 251640 166940 164330 155200 171400 145310 157700 179900 191320 168290 150190 89435 148090 148360 161420 166990 187960 185160 248900 169380 172950 157840 174140 152040 162570 179520 182570 160050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238550000 21186 2812 19827 40093;40094 32167 32167 1 9606 Homo sapiens 0.02320589646035387 QFHQLYR Unmodified 990.50355 0.50354903 4453 Q9BW83;Q9BW83-2 IFT27 Intraflagellar transport protein 27 homolog yes no 0 0 0 2.5 0.5 1 1 35.839 35.896 3 0.0030089 8006 20230619_1881_Aki_TMTPro18x_K_F2 124.89 95.726 97651 58155 86274 98706 108140 122510 107190 106410 130730 80396 95899 90240 101010 82139 97745 86397 92246 85438 90054 53632 88998 96573 110650 121620 108820 109130 130290 83058 100230 90943 102750 85230 99080 86754 88267 81184 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39218000 21187 4453 19828 40095;40096 32168;32169 32168 2 9606 Homo sapiens 0.007917401944268931 QFIAAQGSSR Unmodified 1063.5411 0.54105675 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 3.67 3.09 1 1 1 38.522 38.553 2 9.8083E-11 8883 20230619_1888_Aki_TMTPro18x_K_F8 163.88 124.21 312970 229750 257330 278480 363210 392340 319850 330070 443920 263450 282680 284470 276960 225730 344120 276910 327340 254590 288780 210840 267740 278670 368040 386660 328680 339620 438280 270860 297520 285910 286060 237480 347400 276450 312850 242310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 208280000 21188 3402 19829 40097;40098;40099 32170;32171;32172 32172 3 9606 Homo sapiens 0.011827866693920441 QFIDSNPNQPLVILEMESGASAK Oxidation (M) 2503.2265 0.22645406 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PGB5 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 1 0 6 0 1 62.802 62.85 3 4.3916E-26 19400 20230619_1886_Aki_TMTPro18x_K_F6 173.43 149.42 29161 25607 29174 35942 26581 31255 30327 33587 34750 36633 46618 43475 38749 38362 46649 42624 38923 54480 26977 23520 29637 35373 27934 32003 30525 34240 35607 37058 46921 43672 40192 39958 46856 43438 37424 51562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34255000 21189 1637 19830 40100 32173 32173 1067 1 9606 Homo sapiens 0.034969891931723396 QFLECAQNQGDIK Unmodified 1549.7195 0.7194914 4758 Q9Y6H1;Q5T1J5 CHCHD2;CHCHD2P9 Coiled-coil-helix-coiled-coil-helix domain-containing protein 2;Putative coiled-coil-helix-coiled-coil-helix domain-containing protein CHCHD2P9, mitochondrial yes no 0 0 0 5.5 1.12 1 1 1 1 51.196 51.261 3 2.4313E-11 14425 20230619_1886_Aki_TMTPro18x_K_F6 187.63 161.27 430670 344980 409510 438970 369670 454800 442760 420010 460810 543320 590170 671280 595320 529920 572090 596600 660310 703530 398010 316630 417400 435760 389460 457800 442930 434980 473860 546170 600270 670470 606500 554780 587160 604390 631230 666930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 795560000 21190 4758 19831 40101;40102;40103;40104 32174;32175 32175 2 9606 Homo sapiens -0.033379562645905025 QFLESSELPR Unmodified 1204.6088 0.60880197 2353 Q53GG3;B3KN57;B3KML1;O60749;O60749-2 SNX2 Sorting nexin-2 yes no 0 0 0 4.5 0.5 1 1 50.635 50.689 2 0.00025646 14309 20230619_1883_Aki_TMTPro18x_K_F4 152.54 104.26 250060 196730 231850 237040 188330 220310 206710 202410 225390 228930 248160 250680 246260 204420 218300 264110 250640 259860 231030 180480 236380 235890 199720 223660 208100 208850 229490 230590 253460 251970 250040 215550 224520 264080 239560 246830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 270240000 21191 2353 19832 40105;40106 32176 32176 1 9606 Homo sapiens 0.014681918094993307 QFLFRPK Unmodified 934.53887 0.53887191 2301 J3JZZ9;B2RBP3;Q8TBC4;Q8TBC4-2;F8W8D4 UBE1C;UBA3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 1 7 0 1 47.674 47.762 3 0.04338 12547 20230619_1887_Aki_TMTPro18x_K_F7 68.422 26.442 274610 276190 307290 283930 297310 353590 314400 313510 359340 197310 180640 138840 163960 132840 283390 248600 219350 179350 254530 252800 309180 287210 310210 351380 317390 319910 355940 204190 193020 143840 173570 143330 282340 244180 210210 171230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202380000 21192 2301 19833 40107 32177 32177 1 9606 Homo sapiens 0.06898402722219998 QFLNAGK Unmodified 776.41809 0.41808807 1174 P53004;A0A140VJF4;C9J1E1 BLVRA Biliverdin reductase A yes no 0 0 0 2 0 1 46.039 46.118 2 0.079199 12642 20230619_1881_Aki_TMTPro18x_K_F2 73.039 20.356 185300 157690 207220 219910 286750 307920 242710 242910 316770 225690 262730 264700 269240 230700 253540 270910 304260 258140 171550 144850 209940 218000 290370 303140 249510 252160 316120 230450 272390 265890 273940 241160 260960 270860 290300 245490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225000000 21193 1174 19834 40108 32178 32178 1 9606 Homo sapiens 0.020935750087687666 QFLPFLQR Unmodified 1047.5866 0.58655038 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299;H7C597 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 0 5.5 0.5 1 1 61.44 61.491 2 0.020124 18762 20230619_1886_Aki_TMTPro18x_K_F6 88.904 54.801 279890 263080 289180 280980 308360 407090 313280 349770 440650 131150 110640 110890 104780 111360 179780 136680 130680 127490 259120 240930 293300 284050 319650 400590 319400 355260 427570 144290 128950 113730 110990 116100 178550 136580 125490 121200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 359990000 21194 1229 19835 40109;40110 32179 32179 1 9606 Homo sapiens 0.06466056922408825 QFLQAAEAIDDIPFGITSNSDVFSK Unmodified 2712.3283 0.3282766 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;B4DNL5;A0A7P0T8J3;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;A0A7P0Z4J0;B4DJS0;A0A7P0Z4S2;A0A7P0TAX9 P4HB Protein disulfide-isomerase yes no 0 0 0 7.5 0.5 1 1 66.146 66.168 4 2.864E-26 20576 20230619_1887_Aki_TMTPro18x_K_F7 170.8 157.24 39584 31434 37359 33733 35473 37380 44944 43915 39641 41056 45359 41617 41239 35994 43992 48027 41478 45789 36578 28805 38088 33961 37215 37686 44613 44328 40908 41642 46081 42069 42349 37944 44573 47932 39740 43498 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57344000 21195 537 19836 40111;40112 32180 32180 1 9606 Homo sapiens 0.04060558816536286 QFLSETEK Unmodified 980.48148 0.48147619 3423 V9HW74;P09936;D6RE83;B2RD14;D6R956;D6R974;A6NLJ7 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 0 0 4.5 1.12 2 2 2 2 47.419 47.489 2;3 0.00034292 12980 20230619_1882_Aki_TMTPro18x_K_F3 166.16 74.535 1743500 1448800 1581800 1802700 2133700 2073500 1796900 1863800 2184700 2045300 2305400 2350300 2428000 1965200 1996100 2704400 2581400 2258100 1611100 1329300 1629400 1794700 2162400 2072200 1843700 1923400 2208800 2066900 2364800 2360300 2453500 2078300 2073500 2678800 2462000 2150700 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 9195100000 21196 3423 19837 40113;40114;40115;40116;40117;40118;40119;40120 32181;32182;32183;32184;32185 32181 5 9606 Homo sapiens -0.009545290646656213 QFLSQFEMQSR Unmodified 1399.6554 0.65543458 3000 F8WJN3;Q16630-3;Q16630;Q16630-2;A0A2P1M905;A0A2P1M8Z1 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes no 0 0 0 1 0 1 57.534 57.534 2 2.0993E-13 17509 20230619_1880_Aki_TMTPro18x_K_F1 218.11 165.85 87992 71004 80769 86959 76322 90722 83375 82082 92570 83356 85308 84590 96186 73087 82700 94977 93391 96644 81301 65143 82620 86556 79894 91245 83963 84511 93492 84232 88337 85459 97133 76976 84990 95145 89275 91763 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38542000 21197 3000 19838 40121 32186 32186 1 9606 Homo sapiens -0.028406916308313157 QFLTQLMQK Unmodified 1135.606 0.6059652 146 A0A024R1K8;Q15459;Q15459-2;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 5 0 1 61.886 61.935 3 0.00013929 18772 20230619_1885_Aki_TMTPro18x_K_F5 118.71 90.94 136010 138630 146530 130790 119780 182750 161500 155630 201200 51153 32889 36221 42031 35631 88182 46385 52324 36470 126040 126790 147560 133530 128070 180150 161530 158070 195520 57152 42208 37504 44864 37343 86637 46025 50300 34802 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75499000 21198 146 19839 40122 32187 32187 1 9606 Homo sapiens 0.04358645151023666 QFLVEDK Unmodified 877.45453 0.45453316 2096 B3KM89;A8K6V0;O94855;O94855-2;E9PDM8 SEC24D Protein transport protein Sec24D yes no 0 0 0 4 0 1 50.128 50.163 2 0.019704 14041 20230619_1883_Aki_TMTPro18x_K_F4 105.57 20.504 359840 317300 352290 389420 389800 468840 464780 450980 583740 480860 456160 454560 549610 391020 408910 542280 504330 491280 332840 291020 359410 388370 404400 467540 467730 462690 582710 483800 477940 460650 550900 413760 424270 539250 481530 467200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 255850000 21199 2096 19840 40123 32188;32189 32188 2 9606 Homo sapiens 0.010904071148047478 QFMAETQFTSGEK Oxidation (M) 1518.6661 0.66605885 3890 Q14444-2;Q14444;G3V153;B3KXU8 CAPRIN1 Caprin-1 yes no 0 1 0 4.5 0.5 1 1 48.84 48.897 3 0.00027853 13264 20230619_1885_Aki_TMTPro18x_K_F5 93.823 81.463 175600 142580 167010 173210 201390 212670 188910 180600 232950 211410 229500 203490 219770 191500 198950 220370 236010 204000 162300 130800 170910 172920 206140 211360 192550 187540 234650 211880 235000 206630 223680 199420 204820 220040 225240 194050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 474580000 21200 3890 19841 40124;40125 32190;32191 32191 2569 2 9606 Homo sapiens -0.07252753767056674 QFMHQGNVAETTR Oxidation (M) 1533.6994 0.69942466 3021 H0Y517;H7C1U3;Q5T0F9-4;Q5T0F9-3;Q5T0F9-2;Q5T0F9 CC2D1B Coiled-coil and C2 domain-containing protein 1B yes no 0 1 0 5 0 1 31.145 31.223 3 0.01741 6118 20230619_1885_Aki_TMTPro18x_K_F5 56.569 56.569 1696.9 1869.9 3695 2932.1 5418.6 3552.4 3554.7 4211 5565 2480.1 2447.9 4312.4 4325.6 4530.2 4107.4 4290.3 5623.9 2216.6 1587.8 1718.6 3605.2 2883.3 5421.1 3564.9 3754.4 4208.3 5426.5 2661.2 2754.1 4299.5 4354.7 4643.3 4263.3 4201.4 5342.6 2139.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3659500 21201 3021 19842 40126 32192 32192 1781 1 9606 Homo sapiens -0.04607707204536382 QFNLTPPICEQAEYHMFQR Unmodified 2408.1042 0.10417086 1565 A0A590UJB6;A0A590UJJ4;Q13303-3;A0A5F9UN28;Q13303-5;Q13303;Q13303-4;Q13303-2;A8K1X9;A1PR14;B2R615;B2R776;Q6FG22;B0AZM0 KCNAB2 Voltage-gated potassium channel subunit beta-2 yes no 0 0 0 8 0 1 58.923 58.964 3 3.8837E-10 17407 20230619_1888_Aki_TMTPro18x_K_F8 122.01 116.9 22961 20889 20091 22866 22664 16656 24054 19937 23889 24160 22276 20373 22455 20737 28376 24875 20315 21914 21224 19137 20693 22859 23309 17425 24159 20275 24295 24076 22945 20873 23196 21590 28287 24780 19526 20839 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44895000 21202 1565 19843 40127 32193 32193 1 9606 Homo sapiens -0.04355706299338635 QFNYTHICAGASAFGK Unmodified 1770.8148 0.81478877 1075 P13804;A0A0S2Z3L0;A0A0S2Z3M4;P13804-2;H0YLU7;A0A8I5KVL5;A0A8I5KYH4;A0A8I5KYP7;A0A8I5KUF3;H3BV91;H0YKF0;A0A8I5KT03;A0A8I5KUR2;A0A8I5KVC9 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes no 0 0 0 3.5 0.5 1 1 51.84 51.886 3 7.657E-06 14855 20230619_1883_Aki_TMTPro18x_K_F4 107.34 92.945 42555 36171 47649 47431 44243 51385 51527 58495 47791 52545 48167 54573 52516 50131 52513 59486 60141 65270 39398 33202 47933 47039 46405 51806 51453 59081 48956 53453 49655 55153 53508 52339 53860 59930 57504 61914 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160080000 21203 1075 19844 40128;40129 32194 32194 1 9606 Homo sapiens -0.03978603073528575 QFPCEPFK Unmodified 1051.4797 0.47970205 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 52.821 52.893 2 0.0088203 14840 20230619_1887_Aki_TMTPro18x_K_F7 111.95 69.968 195970 161620 170070 190450 182140 204760 211260 212620 218620 138700 133990 116620 136990 90640 170990 166230 158640 106180 181020 148210 175240 190180 189080 206140 211490 214690 218690 143550 141590 118740 141200 98389 172550 162490 151540 101680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87098000 21204 1207 19845 40130;40131 32195;32196 32195 2 9606 Homo sapiens -0.04397861354277666 QFQDAGHFDAENIK Unmodified 1618.7376 0.73758431 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4 0.816 1 1 1 48.111 48.177 3 1.2566E-09 12975 20230619_1885_Aki_TMTPro18x_K_F5 168.05 128.83 76218 54466 71349 79583 69661 93541 81641 84991 102690 102790 100980 114670 117690 99126 89976 128480 119110 135360 70384 50091 72932 78449 72987 93261 82285 87881 103390 103300 104480 115340 118300 104330 93809 128900 113800 128430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 496920000 21205 1022;3868 19846 40132;40133;40134 32197 32197 1 9606 Homo sapiens -0.04703498018170649 QFQDAGHFDAENIKK Unmodified 1746.8325 0.83254733 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 6.5 0.5 1 1 46.316 46.401 4 1.5018E-11 12308 20230619_1886_Aki_TMTPro18x_K_F6 168.64 130.87 295680 253780 286150 277480 300840 309640 359360 327600 302360 339750 353010 309360 326480 258420 397500 342070 329840 304810 273420 232530 291670 278890 312500 311230 357180 333790 313420 341610 358600 313890 337180 272740 398910 340530 316070 290000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308670000 21206 1022;3868 19847 40135;40136 32198 32198 1 9606 Homo sapiens -0.010995645470075033 QFQNAPK Unmodified 831.4239 0.42390173 561 O75131;A0A024R994 CPNE3 Copine-3 yes no 0 0 0 8 0 1 38.595 38.582 2 0.0010376 8909 20230619_1888_Aki_TMTPro18x_K_F8 130.05 94.171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21207 561 19848 40137 32199 32199 1 9606 Homo sapiens 0.0014467352042402126 QFQQGAAGNMK Oxidation (M) 1194.5452 0.54515585 1672 A0A7P0PJI2;A0A7I2V5K0;P61011;G3V4F7;G3V480;B4DDS7;P61011-2 SRP54 Signal recognition particle 54 kDa protein yes no 0 1 0 7.5 0.5 1 1 37.166 37.191 3 5.9114E-05 8336 20230619_1888_Aki_TMTPro18x_K_F8 122.98 104.2 30274 21595 28229 33254 36605 42328 33129 34439 44918 26066 27388 28148 31163 22421 35898 26585 33937 26708 27955 19873 29003 32715 37307 41909 33956 35502 44344 26897 29109 28291 31890 23555 36256 26688 32440 25392 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52163000 21208 1672 19849 40138;40139 32200 32200 1089 1 9606 Homo sapiens -0.04433491899226283 QFREDDFR Unmodified 1111.5047 0.50467125 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;B4DJQ3;P34897-2;Q5HYG8;B4DW25;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4;H0YIZ0 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 1 3 0 1 37.876 37.929 3 0.0053945 8747 20230619_1882_Aki_TMTPro18x_K_F3 87.308 52.084 186640 130640 160840 159380 197640 206060 199250 185970 241940 183280 243290 262620 259070 196100 210700 254030 283640 264000 172230 119920 166070 159230 202440 204390 202070 191350 243860 187890 250310 260820 261520 207590 219350 254770 270540 250720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150460000 21209 657 19850 40140 32201 32201 1 9606 Homo sapiens -0.04662090227338922 QFRPPMGGYCIEFPAGLIDDGETPEAAALR Unmodified 3277.5536 0.55361863 1968 A6NFX8;Q9UKK9;A6NJU6;A6NCQ0;H0YEY4 NUDT5 ADP-sugar pyrophosphatase yes no 0 0 1 7 0 1 63.047 63.08 3 5.1831E-30 19230 20230619_1887_Aki_TMTPro18x_K_F7 182.96 169.72 28163 23008 31272 30886 18155 33206 27979 29103 30481 34424 35969 42135 41685 35719 42535 40154 41630 49579 26065 21128 31324 30571 20255 33269 27748 30163 31143 34732 36951 42187 42400 37301 43175 40814 39895 46962 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172100000 21210 1968 19851 40141 32202 32202 1 9606 Homo sapiens 0.005943969529653259 QFSMFLGK Unmodified 956.47897 0.47897377 3483 Q6FGJ9;P21266;Q59EJ5;A4UJ43;B4E2J2 GSTM3 Glutathione S-transferase Mu 3 yes no 0 0 0 4.5 0.5 1 1 61.15 61.177 2 0.0017231 18793 20230619_1883_Aki_TMTPro18x_K_F4 138.1 99.86 287610 259890 293110 307190 248760 298630 322090 333100 367110 248470 243040 196610 210930 175230 322560 220500 223570 181790 266160 238250 296760 306340 264050 303370 321910 335640 366060 254220 253740 201440 221540 183870 319990 219050 214580 173220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 223980000 21211 3483 19852 40142;40143 32203;32204 32203 2 9606 Homo sapiens -0.0010065600329198787 QFSQYIK Unmodified 912.47052 0.47051757 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9 RPL5 60S ribosomal protein L5 yes no 0 0 0 2 0.816 1 1 1 50.477 50.52 3 0.00442 14664 20230619_1881_Aki_TMTPro18x_K_F2 111.01 79.635 339290 289570 289630 292490 385470 413090 369300 336000 447050 167590 147130 107270 149690 100030 247730 172210 171710 118920 313440 265150 299810 296850 392510 406920 375340 344110 438270 177190 165160 111760 157270 107340 245550 169160 164660 113710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 513140000 21212 1916 19853 40144;40145;40146 32205;32206 32205 2 9606 Homo sapiens 0.010781133517070884 QFSSADEAALK Unmodified 1165.5615 0.56151742 1223 Q9HCC0;Q9HCC0-2;A0A804HLJ9;A0A140VK29;A0A804HKE8;A0A804HJ24;A0A804HK37;A0A804HJ84;A0A804HJ31;A0A804HL02;A0A804HJL2;A0A804HJC1 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 4 0 1 47.707 47.747 3 5.432E-06 12956 20230619_1883_Aki_TMTPro18x_K_F4 130.1 104.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21213 1223 19854 40147 32207 32207 1 9606 Homo sapiens -0.014640874614769928 QFTPCQLLADHANSPNK Unmodified 1939.921 0.92104476 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 1 0 1 51.242 51.242 3 1.5569E-09 14867 20230619_1880_Aki_TMTPro18x_K_F1 137.45 113.65 55624 48951 53718 56179 55471 66203 69223 65835 71140 71866 69382 78015 81252 62577 69932 90522 80818 87101 51443 44868 54786 56288 57877 66171 69046 67445 72323 72480 71851 78402 81980 66557 72028 90257 77264 82742 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103900000 21214 2908 19855 40148 32208 32208 1 9606 Homo sapiens -0.011318922988039049 QFVFDLHSGK Unmodified 1176.5928 0.59275797 1425 A0A8I5KU76;A0A384MEE7;Q9BS26;A0A8I5KW59 ERP44 Endoplasmic reticulum resident protein 44 yes no 0 0 0 1 0 1 52.057 52.057 3 3.1941E-07 15207 20230619_1880_Aki_TMTPro18x_K_F1 157.68 126.08 55819 51217 55800 61642 55958 68203 64978 70137 77238 72868 75825 72291 75520 62804 72242 87115 78822 84652 51653 46960 56735 61488 58416 68498 65388 71569 77924 73478 77828 73142 76928 66389 73968 86964 75393 80407 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91198000 21215 1425 19856 40149 32209 32209 1 9606 Homo sapiens 0.01152530363265214 QFVPGDEPR Unmodified 1043.5036 0.50360861 160 A0A024R1T5;P09543-2;P09543;B4DI06 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes no 0 0 0 2.5 0.5 1 1 41.201 41.269 2 6.2106E-05 10104 20230619_1882_Aki_TMTPro18x_K_F3 161.79 120.14 117600 97017 128880 120280 144710 158240 145200 156750 193820 141040 174090 168290 177980 149280 157730 168380 204630 190200 108830 89012 130180 120100 149110 157090 147900 159750 193710 144320 179650 169050 180600 155650 163380 170090 195230 180470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99191000 21216 160 19857 40150;40151 32210;32211 32211 2 9606 Homo sapiens -0.01640304596230635 QFVVFEGNHYFYSPYPTK Unmodified 2222.0473 0.047291129 3384 P04843;Q6IBR0;Q96HX3;B4DL99 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 3 0 1 60.893 60.922 3 1.6739E-06 18838 20230619_1882_Aki_TMTPro18x_K_F3 103.85 84.461 22050 17687 19656 21832 20295 21138 20457 22069 25171 25396 24910 28814 26612 23442 29039 25968 23761 30087 20369 16229 20185 21700 21037 21455 20772 22571 25377 25587 25680 28893 27219 24493 29180 26297 22830 28510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210230000 21217 3384 19858 40152 32212 32212 1 9606 Homo sapiens -0.014850625218514324 QFWFQGNR Unmodified 1081.5094 0.50936269 1260 A0A1B0GVH5;A0A1B0GTC3;B3KU60;Q9C0B1;A0A1B0GUC3;A0A1B0GU26;A0A1B0GTC5;A0A1B0GV98;A0A1B0GTY1;B4DHN4;A0A1B0GUY7;A0A1B0GTI3 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes no 0 0 0 4 0 1 52.685 52.708 2 0.034416 15228 20230619_1883_Aki_TMTPro18x_K_F4 76.134 63.098 128200 109470 119770 123480 120060 153430 147890 143630 164790 135970 123600 110250 119960 102470 123660 121340 114680 109380 118510 100330 122430 123980 125620 152610 147980 147170 165220 137110 128540 112860 122730 106970 125170 120990 109770 104040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39260000 21218 1260 19859 40153 32213 32213 1 9606 Homo sapiens -0.028131612938977923 QFYDQALQQAVVDDDANNAK Unmodified 2252.0346 0.034554191 715 E9PJK1;E9PRJ8;H0YDL9;H0YDJ9;A0A024RCB7;E9PIF1;A6NMH8;H0YEE2;P60033 CD81 Tetraspanin;CD81 antigen yes no 0 0 0 3.5 0.5 1 1 59.242 59.258 3 5.6181E-45 18093 20230619_1882_Aki_TMTPro18x_K_F3 252.33 218.71 63401 49807 68162 81192 67803 79275 88354 90683 88895 102230 88172 92290 111600 80187 84078 95740 93653 95872 58647 45851 68941 79346 71001 80513 87914 92147 90611 102340 91538 93687 111750 84022 86571 95939 89529 91050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 405130000 21219 715 19860 40154;40155 32214;32215 32214 2 9606 Homo sapiens -0.04138170442729461 QFYINVER Unmodified 1067.54 0.53999412 2105;3883 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;B4DNH2;J3KTB5;J3KSZ0;J3QL43;B4DKP9;J3KTN0;Q14240;Q14240-2;E7EQG2;Q9NZE6;B4DJX6;Q96B07 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 0 7 0.816 1 1 1 49.936 50.014 2 0.001695 13547 20230619_1887_Aki_TMTPro18x_K_F7 138.54 110.15 776970 500520 686570 833720 641630 893950 858890 818390 994660 1031100 974210 1082900 1163800 920410 842870 1199200 1111500 1127700 716800 461290 705510 814640 677650 896700 857450 847180 1005300 1032200 1009200 1091200 1166300 969720 879530 1195600 1061000 1071800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 669030000 21220 2105;3883 19861 40156;40157;40158 32216;32217;32218 32217 3 9606 Homo sapiens 0.008925723004722386 QGADTLAFMSLLEEK Unmodified 1651.8127 0.81272309 3854 Q13505-3;Q13505 MTX1 Metaxin-1 yes no 0 0 0 6 0 1 64.634 64.678 3 0.00071374 20221 20230619_1886_Aki_TMTPro18x_K_F6 80.738 57.86 27996 23660 21054 25659 27608 29362 27727 28476 31003 30667 32113 32825 32997 34954 32548 35555 34531 38342 25840 21679 22090 25801 28173 29401 28049 29207 31451 30949 32945 33302 33675 35991 33232 35872 33046 36374 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186480000 21221 3854 19862 40159 32219 32219 1 9606 Homo sapiens 0.012889233980331483 QGAIVAVTGDGVNDSPALK Unmodified 1810.9425 0.94249171 3387;959 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z1Q9;B3KV59;B3KSY7;B3KNQ8;P05023;P05023-4;P05023-3;B7Z3V1;B3KRI1;B2RAQ4;P50993;B1AKY9;A0A0S2Z3W6;B7Z1N5;H0Y7C1;B3KX35;B4DIQ8 ATP1A3;ATP1A1;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2 no no 0 0 0 6 0 1 54.582 54.659 3 4.2836E-20 15850 20230619_1886_Aki_TMTPro18x_K_F6 189.77 178.13 63555 48232 54066 66433 65139 82136 75864 70952 95475 96320 85655 89198 102490 78183 76671 106810 93153 105150 58668 44316 55978 65758 67203 81568 76432 73931 95820 95788 89075 90494 102800 82578 79500 106690 89052 99850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2712700000 21222 959;3387 19863 40160 32220 32220 1 9606 Homo sapiens 0.06945816001530147 QGANINEIR Unmodified 1013.5254 0.52540669 3929 Q15365;Q53SS8 PCBP1 Poly(rC)-binding protein 1 yes no 0 0 0 4 0.816 1 1 1 36.637 36.705 2 8.9844E-07 8283 20230619_1882_Aki_TMTPro18x_K_F3 145.17 58.219 664710 511090 560580 547790 687400 756210 638810 673280 910320 740200 826530 800500 888620 708460 666180 805740 910170 797280 613610 468400 579910 553180 703440 747140 655290 695020 908240 746810 854110 806950 894310 739150 695500 807320 867700 757760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1432400000 21223 3929 19864 40161;40162;40163 32221;32222;32223 32221 3 9606 Homo sapiens 0.01918500152339675 QGANSRPVNQTPPPEGEK Unmodified 1904.9341 0.93405228 3407 P08138-2;P08138 NGFR Tumor necrosis factor receptor superfamily member 16 yes no 0 0 1 4 0 1 33.455 33.509 3 0.069047 6966 20230619_1883_Aki_TMTPro18x_K_F4 42.338 23.457 1732 1004 2455.3 2005 7479.7 9478.1 3198.1 1954.8 2651 1544.9 3685.5 4461.7 3003.9 2092.4 3806.6 3855.5 3257.8 4786.4 1604.2 928.25 2507.7 2030.4 7263.8 8837.9 3453.1 2506.7 2771.7 1680.2 3710.3 4318.8 3121.3 2330.4 3827.5 3896.9 3133 4530.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4092400 21224 3407 19865 40164 32224 32224 1 9606 Homo sapiens 0.017782620848947772 QGAPAPPPAAR Unmodified 1031.5512 0.55122751 4161 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 6 0 1 32.072 32.105 2 0.0088582 6542 20230619_1886_Aki_TMTPro18x_K_F6 76.221 58.186 8892.6 7195.2 11774 11372 8517.6 12492 10124 8931.7 9525 9941.2 20536 16958 14146 15017 12799 8572.5 18093 16385 8244.2 6620.3 11672 11148 9161.4 12452 10111 9410.2 10149 10209 20242 16836 14593 15207 13306 9172.9 17248 15486 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10661000 21225 4161 19866 40165 32225 32225 1 9606 Homo sapiens 0.03671394394586969 QGAPGQHSGFEYSR Unmodified 1519.6804 0.68040378 3539 P32929-2;P32929-3;P32929 CTH Cystathionine gamma-lyase yes no 0 0 0 5.5 0.5 1 1 33.335 33.398 3 1.2008999999999999E-22 6924 20230619_1885_Aki_TMTPro18x_K_F5 237.21 222.95 16511 12610 17897 15864 20731 22968 19608 18366 21572 17558 22503 22219 19517 18332 20951 18967 28551 26350 15272 11575 18095 15848 21276 22579 19898 19060 21884 17940 22916 22216 20104 19073 21686 19468 27229 24957 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21874000 21226 3539 19867 40166;40167 32226;32227 32226 2 9606 Homo sapiens -0.05864920503904614 QGAPTSFLPPEASQLKPDR Unmodified 2038.0484 0.048353761 95 Q9BUJ2;A0A0A0MRA5;Q9BUJ2-2;Q9BUJ2-4;A8K6U7;A8K3W4;B7Z4B8;A0A024R0J9;Q9BUJ2-3;A8K5K0;M0QYZ0;M0QZV6;M0R0K8;M0R203;M0QYI8 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 1 1 0 1 54.065 54.065 3 1.7925E-10 16018 20230619_1880_Aki_TMTPro18x_K_F1 137.61 101.86 67240 59475 69820 76247 66593 71964 71858 71580 76134 87064 85554 82723 90765 79196 79566 97504 89670 101390 62226 54572 70696 75563 69542 73096 72315 73582 77764 87011 87542 84080 91953 82786 81767 97849 85780 96219 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65794000 21227 95 19868 40168 32228 32228 1 9606 Homo sapiens 0.07085151846968074 QGATGFGQGNIR Unmodified 1204.5949 0.59488324 4366 Q96IR7 HPDL 4-hydroxyphenylpyruvate dioxygenase-like protein yes yes 0 0 0 5.33 3.09 1 1 1 38.194 38.18 2 1.634E-17 8747 20230619_1888_Aki_TMTPro18x_K_F8 229.82 190.79 75063 66153 66088 92883 92215 101370 98526 105760 115790 96362 110270 120890 124220 93314 94496 112420 132390 101720 69373 60761 68452 91656 93918 101930 99484 107480 116700 98640 114050 120670 124880 98188 98786 112030 126090 96844 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108070000 21228 4366 19869 40169;40170;40171 32229;32230;32231 32231 3 9606 Homo sapiens 0.0007695910110214754 QGCDCECLGGGR Unmodified 1367.5017 0.50165283 4588 V9HWC4;Q9NRX4;Q6FIE5;Q9NRX4-2 HEL-S-132P;PHPT1;PHP14 14 kDa phosphohistidine phosphatase yes no 0 0 0 1.5 0.5 1 1 32.966 32.995 2 7.6374E-07 6854 20230619_1881_Aki_TMTPro18x_K_F2 162 148.24 117150 65718 135450 128990 145890 154870 145360 125420 149160 158690 230520 242260 216130 195260 193060 108110 256560 236660 108250 60756 136180 125300 150570 153890 146770 131160 154910 161140 232110 240280 220020 198450 199720 117550 244730 223490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 279770000 21229 4588 19870 40172;40173 32232;32233 32233 2 9606 Homo sapiens -0.16739792730322733 QGDNCDSIIR Unmodified 1176.5193 0.51933503 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;Q9P2J5-3;Q9HAM7;Q9NPU8;B3KXA9 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 1.33 0.471 2 1 36.86 36.889 2 1.8291E-13 8438 20230619_1881_Aki_TMTPro18x_K_F2 222 197.84 181100 132810 161440 175270 168750 180820 180030 175100 231140 202870 230350 246860 257370 213470 195820 265360 304510 271210 167200 121990 165810 173570 175090 182300 182450 180080 232470 204950 237590 247530 258980 224050 206570 265940 290070 257650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326570000 21230 1603 19871 40174;40175;40176 32234;32235 32235 2 9606 Homo sapiens -0.061863861415076826 QGDSSLVFGIKPGDPR Unmodified 1671.858 0.8580338 2676 Q6DKI9;Q9BSR4;Q4QRK8;B7Z1W6;Q9H9Y6-4;Q9H9Y6-5;Q9H9Y6-2;Q9H9Y6;Q9H9Y6-3;Q9H6S8;H7C0D9 POLR1B DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA2 yes no 0 0 1 8 0 1 51.345 51.422 3 0.047367 14160 20230619_1888_Aki_TMTPro18x_K_F8 46.543 34.378 43201 36247 39898 43583 44358 45514 47693 47439 58619 44656 47209 41022 48911 39966 43651 46303 46999 44428 39927 33244 40891 43444 45806 45934 48222 48257 58603 45199 49002 41806 49609 41607 44678 46320 44918 42228 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101720000 21231 2676 19872 40177 32236 32236 1 9606 Homo sapiens 0.04897909975397852 QGDTGDWIGTFLGHK Unmodified 1630.774 0.77396981 4727 Q9Y3F4;Q9Y3F4-2 STRAP Serine-threonine kinase receptor-associated protein yes no 0 0 0 1 0 1 61.732 61.732 3 0.0002932 19199 20230619_1880_Aki_TMTPro18x_K_F1 90.754 77.876 26595 24343 28131 32727 25556 29822 32281 30353 32370 40467 42169 38422 45120 37072 33836 48875 43774 49073 24621 22345 28442 32315 26929 30384 32171 31255 33393 40280 42896 39081 45414 38921 35240 48886 41824 46588 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79401000 21232 4727 19873 40178 32237 32237 1 9606 Homo sapiens -0.01618621121497199 QGEAEFNR Unmodified 949.42536 0.42535829 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;Q96BG6;O43707-2;O43707-3;A0A0S2Z3X3 ACTN4 Alpha-actinin-4 yes no 0 0 0 1 0 1 32.91 32.91 2 0.029599 7138 20230619_1880_Aki_TMTPro18x_K_F1 80.438 48.483 15783 5897.3 18606 22995 22845 26089 20383 23348 27491 21350 28494 31546 27237 25684 26139 14940 34801 32083 14566 5552.2 18757 21812 23339 26043 20924 23989 27617 22005 29152 31327 27810 26129 27010 16185 33195 30301 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21644000 21233 1069 19874 40179 32238 32238 1 9606 Homo sapiens -0.05137737181473767 QGEDAEVVCR Unmodified 1161.5084 0.508436 2815 D3DSC5;H9KV31;O15394-2;O15394 NCAM2 Neural cell adhesion molecule 2 yes no 0 0 0 1 0 1 34.147 34.147 2 0.00094194 7655 20230619_1880_Aki_TMTPro18x_K_F1 117.7 90.217 22938 17918 26783 27061 25857 23977 25370 29378 33309 21436 30609 34375 25130 26371 24505 15842 39824 33418 21234 16479 26866 26537 26884 24604 25873 29431 33319 22492 31314 34006 25844 26905 25721 17105 37911 31578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18050000 21234 2815 19875 40180 32239 32239 1 9606 Homo sapiens -0.0658578851580387 QGEDFSR Unmodified 837.3617 0.3616954 2991 F8W785;O00461 GOLIM4 Golgi integral membrane protein 4 yes no 0 0 0 1 0 1 31.846 31.846 2 0.010873 6725 20230619_1880_Aki_TMTPro18x_K_F1 117.4 75.17 17341 9379.9 25071 22061 31607 37713 26243 32386 34150 24347 36486 47917 32008 32360 40760 14321 46922 45582 16060 8700.7 24909 21420 32184 36785 27038 33217 34389 25760 37223 46965 33265 32947 41481 16520 44826 42968 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16481000 21235 2991 19876 40181 32240 32240 1 9606 Homo sapiens -0.06349097618556243 QGEDNSTAQDTEELEK Unmodified 1792.7599 0.75989547 567 A0A024R9D2;Q86UE4;E5RJU9 MTDH Protein LYRIC yes no 0 0 0 1 0 1 42.601 42.601 3 0.00053351 11291 20230619_1880_Aki_TMTPro18x_K_F1 77.13 64.362 18350 14319 18097 23672 17628 22868 19226 19325 22900 19723 24058 27344 23171 18336 18020 24241 28201 27999 16961 13185 18434 23102 18422 23082 19412 20014 23151 20145 24604 27101 23433 19529 19010 24454 26883 26554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133910000 21236 567 19877 40182 32241 32241 1 9606 Homo sapiens -0.10477407921712256 QGEEIHNEVEFEWLR Unmodified 1913.8908 0.89079049 1260 A0A1B0GVH5;A0A1B0GTC3;B3KU60;Q9C0B1;A0A1B0GUC3;A0A1B0GU26;A0A1B0GTC5;A0A1B0GV98;A0A1B0GTY1;B4DHN4;A0A1B0GUY7;A0A1B0GTI3 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes no 0 0 0 2 0 1 55.206 55.227 3 0.00018261 16679 20230619_1881_Aki_TMTPro18x_K_F2 103.61 72.611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21237 1260 19878 40183 32242 32242 1 9606 Homo sapiens -0.029599276924045625 QGEEPLVR Unmodified 926.48214 0.48214489 2527 B4DLG2;O75152;Q0D2N5;E9PBY7;E9PQ61;A0A1W2PPR9;P0DQW0;B4DYM8;A0A8V8TLD8;A0A1B0GTU1;A0A024R8H9 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 0 0 0 2 0 1 35.713 35.769 2 0.028304 7988 20230619_1881_Aki_TMTPro18x_K_F2 81.594 59.447 37334 28580 43258 37529 38673 44211 42003 41944 57376 45108 45504 47337 52712 40223 39340 49735 60522 52878 34553 26245 43347 37264 40644 44139 42640 43088 57081 45515 47555 47713 52932 42256 41459 49970 57650 50219 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23841000 21238 2527 19879 40184 32243 32243 1 9606 Homo sapiens 0.015963103750550545 QGETLALNER Unmodified 1129.5728 0.57275081 1066;2115 E9PRV7;A0A0S2Z3I6;A0A0S2Z392;P25098;Q8N433;A0A024R1D8;P35626;A8K869 ADRBK1;ADRBK2 Beta-adrenergic receptor kinase 1;Beta-adrenergic receptor kinase 2 no no 0 0 0 2 0 1 39.727 39.797 2 6.7101E-11 9704 20230619_1881_Aki_TMTPro18x_K_F2 169.65 128.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21239 1066;2115 19880 40185 32244 32244 1 9606 Homo sapiens 0.013147346326377374 QGEVIVSIEEKPK Unmodified 1454.7981 0.7980593 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;Q6PJY7;E9PPR5 NASP Nuclear autoantigenic sperm protein yes no 0 0 1 5.5 0.5 1 1 49.772 49.849 3 1.3423E-06 13839 20230619_1886_Aki_TMTPro18x_K_F6 142.1 124.18 208070 164140 190110 201860 213430 258380 218960 192210 208520 237520 251710 251420 226210 180220 229690 214390 219120 216280 192220 150610 195060 201440 220160 255420 220140 202230 214880 238000 255150 252080 231700 190100 232830 215080 209730 205410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 189720000 21240 3605 19881 40186;40187 32245;32246 32246 2 9606 Homo sapiens 0.08885219312151094 QGFDFLCMPVFHPR Oxidation (M) 1765.8069 0.80686662 3222 O14744;O14744-2;B2RDD7;O14744-5;O14744-3;O14744-4;G3V580;G3V2L6;C9JSX3 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed;Protein arginine N-methyltransferase 5 yes no 0 1 0 3 0 1 58.694 58.724 3 0.053692 17912 20230619_1882_Aki_TMTPro18x_K_F3 40.211 31.104 56558 49412 59494 66523 60008 62397 60206 63249 57847 67123 62708 64532 67299 61374 66879 64503 77898 71563 52343 45365 60232 65708 62238 63433 60661 64667 59332 67525 64344 65501 68558 63579 68604 65179 74382 67919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28994000 21241 3222 19882 40188 32247 32247 1896 1 9606 Homo sapiens -0.04540453594700011 QGFGELLQAVPLADSFR Unmodified 1846.9577 0.95774784 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 0 1.5 0.5 1 1 64.867 64.871 2 1.8199E-29 20749 20230619_1881_Aki_TMTPro18x_K_F2 277.31 253.46 81301 76195 84683 94368 78925 93456 90612 96488 87416 94953 99584 104100 109590 88849 97036 113260 113010 112580 75271 69876 85723 93798 82761 94628 90644 98326 89769 96281 102080 104770 110910 93458 99864 113340 107970 106930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 167740000 21242 3515 19883 40189;40190 32248;32249 32249 2 9606 Homo sapiens 0.06814727589380709 QGFGNLPICMAK Oxidation (M) 1350.6424 0.64242706 2973 V9GYY3;F5H2F4;P11586;V9GZ78;B7Z809;A0A8V8TL50 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 1 0 3 0 1 53.862 53.915 3 0.0085614 15892 20230619_1882_Aki_TMTPro18x_K_F3 60.49 46.584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21243 2973 19884 40191 32250 32250 1759 1 9606 Homo sapiens -0.018868460145995414 QGFGNLPICMAK Unmodified 1334.6475 0.64751243 2973 V9GYY3;F5H2F4;P11586;V9GZ78;B7Z809;A0A8V8TL50 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 4 0 1 59.215 59.217 3 0.0082142 18012 20230619_1883_Aki_TMTPro18x_K_F4 68.44 53.239 180830 147390 186360 180470 140810 196780 168430 168680 176770 146000 122020 118930 147460 113870 146430 170900 143390 114540 167250 135220 188160 179780 150910 197000 168570 173680 177430 148020 128920 121910 149600 120630 148880 167610 137020 109490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167990000 21244 2973 19884 40192 32251 32251 1 9606 Homo sapiens -0.00642542151967973 QGFISSLK Unmodified 878.48617 0.48616764 1873 B4DWG1;A0A994J542;B3KM47;Q9Y6Y8;Q9Y6Y8-2;B3KN10 SEC23IP SEC23-interacting protein yes no 0 0 0 2.5 0.5 1 1 52.646 52.692 2 0.003949 15412 20230619_1882_Aki_TMTPro18x_K_F3 117.89 36.255 106620 89737 94591 104560 114360 135910 129980 128940 169620 114120 112380 103510 118690 95553 110970 124860 120880 120960 98518 82277 97480 104800 117810 134860 131290 131770 168110 115930 118210 105370 120570 100410 113600 124740 115560 114930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107820000 21245 1873 19885 40193;40194 32252 32252 1 9606 Homo sapiens 0.042063998687467574 QGFWEEFETLQQQECK Unmodified 2085.9102 0.9102053 1318 Q06124-1;Q06124;A0A8I5KW48;A0A3G1LBG2;A0A1W2PPU4;A0A8I5QJ58;Q06124-3;A0A8I5QL30;A0A8I5KVS6 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 0 0 0 5 0 1 63.435 63.481 3 0.0038874 19502 20230619_1885_Aki_TMTPro18x_K_F5 61.265 54.991 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21246 1318 19886 40195 32253 32253 1 9606 Homo sapiens -0.0893133946378839 QGGDVLQNEEGETTSHLMGMFYR Oxidation (M) 2614.1428 0.14280079 3568 Q6FHX6;P39748;B4DWZ4;F5H1Y3 FEN1 Flap endonuclease 1 yes no 0 1 0 3 0 1 56.387 56.423 3 0.0037824 16973 20230619_1882_Aki_TMTPro18x_K_F3 62.082 54.826 37662 33746 34858 38072 29238 39061 40455 35609 37079 27151 19094 17383 22169 15410 21318 24756 21693 19573 34824 30924 35591 38113 31158 39335 40020 36411 37233 27612 20573 18037 22475 16473 21732 24426 20737 18653 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13189000 21247 3568 19887 40196 32254 32254 2241 1 9606 Homo sapiens -0.09970490246178088 QGGGGGGGSVPGIER Unmodified 1283.6218 0.62182627 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;M0R2T0;B4DEG4 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 4 0.816 1 1 1 36.093 36.157 2 1.0007E-13 7924 20230619_1885_Aki_TMTPro18x_K_F5 210.73 185.86 282130 224520 271040 285820 344170 365520 323760 304290 398700 381520 404070 388620 423330 340200 313440 422540 462750 388250 260750 206080 277430 284590 351170 362200 329890 317160 402210 381790 414890 392640 426230 356910 329460 421070 440800 369390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 601140000 21248 3631 19888 40197;40198;40199 32255;32256;32257 32257 3 9606 Homo sapiens -0.008639770783929634 QGGLGPIR Unmodified 796.45554 0.45553621 3838 V9HW63;Q13162;H7C3T4;A6NJJ0 HEL-S-97n;PRDX4 Peroxiredoxin-4 yes no 0 0 0 5.33 3.09 1 1 1 38.381 38.397 2 0.0019728 8822 20230619_1888_Aki_TMTPro18x_K_F8 134.12 36.528 179930 134790 140680 165920 214630 320390 208490 206440 492990 125280 116910 128650 130270 111650 153460 156390 183960 136810 165990 123710 147560 166870 218310 309340 218850 216500 469900 132040 138260 129980 133900 118060 157320 155330 175390 130320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 161200000 21249 3838 19889 40200;40201;40202 32258;32259 32259 2 9606 Homo sapiens 0.04916666274380077 QGGLGPMNIPLVSDPK Unmodified 1621.8498 0.84977729 1476 A0A384NPQ2;Q06830;A0A0A0MSI0;B2R4P2 PRDX1 Peroxiredoxin-1 yes no 0 0 0 1.5 0.5 1 1 61.431 61.437 3 8.2209E-06 19043 20230619_1880_Aki_TMTPro18x_K_F1 106.3 87.029 1372600 1090400 1307100 1312100 1125700 1454300 1356800 1283500 1538900 1806300 1640200 1954800 2029300 1762000 1634200 2295300 2199700 2511300 1268500 1000300 1330800 1308900 1191800 1455600 1360700 1337300 1563400 1801800 1697100 1970600 2040900 1852400 1703700 2307800 2101400 2381800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2149000000 21250 1476 19890 40203;40204 32260;32261;32262 32260 3 9606 Homo sapiens 0.06372639734422592 QGGPTYYIDTNALR Unmodified 1567.7631 0.76307078 3368 Q6FI97;Q53FS0;O96019;O96019-2;H7C5S0;C9JQT2 BAF53A;ACTL6A Actin-like protein 6A yes no 0 0 0 7.5 0.5 1 1 52.248 52.324 2 2.2721E-36 14627 20230619_1887_Aki_TMTPro18x_K_F7 270.02 241.81 83533 68441 76692 82211 70830 92756 85902 87299 85010 97378 104450 99312 117260 82379 94205 121640 105720 104050 77189 62776 78441 82036 74552 92838 85753 89825 87484 97894 106760 100230 118050 87661 96988 120530 101030 99018 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 244180000 21251 3368 19891 40205;40206 32263;32264 32263 2 9606 Homo sapiens 0.0018997650422534207 QGGYSQSNYNSPGSGQNYSGPPSSYQSSQGGYGR Unmodified 3502.4682 0.46824534 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;K7ELV3 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 8 0 2 43.765 43.775 3;4 9.0947E-41 10986 20230619_1888_Aki_TMTPro18x_K_F8 200.06 195.35 8302.9 6206.6 7926.6 10192 9012.6 10177 9058.8 10161 7350 15629 16264 20052 21828 13846 14253 18985 17950 15865 7670.4 5715.4 8113.5 9956.2 9273.7 10287 9090.5 10528 7978.5 15613 16529 19932 21706 14770 14856 18809 17124 15109 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 36549000 21252 3823 19892 40207;40208 32265;32266;32267 32266 3 9606 Homo sapiens -0.1828900544564931 QGHEAYVEMAR Oxidation (M) 1305.5772 0.57718426 1847 A0A8V8TPV5;A0A8V8TQZ3;Q8WWQ0;A0A8V8TQM4;A0A8V8TPK0 PHIP PH-interacting protein yes no 0 1 0 2.5 0.5 1 1 28.536 28.628 3 0.0021717 5060 20230619_1882_Aki_TMTPro18x_K_F3 73.082 57.543 7407.1 3201.9 7972.4 8123.3 9528.2 7275.3 8341.5 7851.7 9412.3 6678.7 7417.4 9679 10667 7729.8 7623.3 7645.3 8792.5 7142.7 6833.3 2978.6 8071.1 7780.3 9715.3 7434.1 8512.3 7956.4 9445.8 6907.2 7859.9 9616 10631 8035.4 7868.6 7658.8 8389.9 6795.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12734000 21253 1847 19893 40209;40210 32268 32268 1179 1 9606 Homo sapiens -0.06338124216085816 QGHEAYVEMAR Unmodified 1289.5823 0.58226964 1847 A0A8V8TPV5;A0A8V8TQZ3;Q8WWQ0;A0A8V8TQM4;A0A8V8TPK0 PHIP PH-interacting protein yes no 0 0 0 3.5 0.5 1 1 34.01 34.069 3 0.0012315 7171 20230619_1883_Aki_TMTPro18x_K_F4 85.554 79.712 29050 15859 31101 32371 43749 37116 36232 37475 45581 25542 34352 29548 30446 24176 32612 25482 40087 36298 26822 14673 31606 31370 44159 37177 37251 37939 45388 26608 35575 29660 31303 25210 33494 26212 38257 34375 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35303000 21254 1847 19893 40211;40212 32269 32269 1 9606 Homo sapiens -0.05093820353454248 QGHIYMEMNFTNK 2 Oxidation (M) 1643.7072 0.70721216 1172 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;A0A087X253;B4DWG4;B4E261;Q96EL6;B4DIL5 AP2B1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 2 0 7 0 1 40.553 40.62 3 0.0011199 9507 20230619_1887_Aki_TMTPro18x_K_F7 78.324 68.787 29628 10596 23308 34396 30720 21679 30786 26322 32232 30874 39946 33235 31653 28328 26429 39752 32470 30997 27252 9927.7 24366 32553 31239 22985 31073 26732 33041 31028 40202 33512 32330 29963 27376 39236 30998 29539 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21469000 21255 1172 19894 40213 32270 32270 717;718 1 9606 Homo sapiens -0.08889315999249447 QGHIYMEMNFTNK Oxidation (M) 1627.7123 0.71229754 1172 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;A0A087X253;B4DWG4;B4E261;Q96EL6;B4DIL5 AP2B1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 1 0 7.67 0.471 1 2 44.472 44.523 3 0.00023777 11977 20230619_1888_Aki_TMTPro18x_K_F8 104.24 90.214 23774 12690 22395 27534 25391 28336 27888 27713 34571 27932 28988 26282 30758 21900 24831 29372 31376 26232 21925 11755 22943 26563 26218 28549 28173 28364 34600 28180 30056 26623 31033 23147 25738 29208 29922 24967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30499000 21256 1172 19894 40214;40215;40216 32271;32272 32272 717;718 2 9606 Homo sapiens -0.07645012136640617 QGIETPEDQNDLRK Unmodified 1641.7958 0.79582747 322 Q15637-6;A0A024R566;B4DJU4;Q15637;Q15637-2;Q15637-3;Q15637-4;A0A024R572;A0A024R588;A0A024R5D9;B4DSE4;Q15637-5;A0A7P0T9U7;Q15637-7;B4DX42 SF1 Splicing factor 1 yes no 0 0 1 3 0.816 1 1 1 41.086 41.145 3 1.4946E-11 10314 20230619_1881_Aki_TMTPro18x_K_F2 172.1 133.38 245810 183620 209120 223410 242740 279830 252680 234250 294420 274070 318360 304860 344560 259090 257710 357780 337290 320900 226890 168510 216090 223060 249980 277620 255450 243560 298470 275880 326450 306760 346520 274050 268530 355580 321830 305240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 501330000 21257 322 19895 40217;40218;40219 32273;32274 32273 2 9606 Homo sapiens 0.0006013883639752748 QGIINPFPASK Unmodified 1170.6397 0.63970816 3047 Q68D13;H0YI78 DKFZp779C159;KIF21A yes no 0 0 0 3 0 1 54.926 54.973 3 0.014634 16325 20230619_1882_Aki_TMTPro18x_K_F3 64.55 51.57 42031 35546 40535 41128 40443 44829 32218 45618 42207 42233 50940 46257 56364 40152 53433 58467 55446 70120 38862 32588 41289 41140 41823 45074 33340 46421 42792 42974 52060 46633 57156 42646 54530 59081 53132 66423 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43604000 21258 3047 19896 40220 32275 32275 1 9606 Homo sapiens 0.061213899144149764 QGILGAQPQLIFQPHR Unmodified 1801.9951 0.9951364 2414 B3KTJ9;Q8N163-2;Q8N163;H0YC69;E5RFJ3;H0YC58 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 5 0 1 55.813 55.877 3 5.9176E-15 16181 20230619_1885_Aki_TMTPro18x_K_F5 188.13 148.5 92162 77152 96809 98598 84756 95872 110560 130260 102170 129630 121480 102980 135090 114680 96696 135550 135930 135930 85267 70805 97800 97827 89636 97920 109810 130580 105460 130130 124160 106250 135640 119050 101380 135780 129680 129100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235620000 21259 2414 19897 40221 32276 32276 1 9606 Homo sapiens 0.12621863645631493 QGILLEHR Unmodified 964.54541 0.54541385 4423 Q9BRX8-2;Q9BRX8 FAM213A Redox-regulatory protein FAM213A yes no 0 0 0 6 0 1 37.467 37.543 3 0.00048748 8517 20230619_1886_Aki_TMTPro18x_K_F6 138.06 84.896 65280 44670 52209 55245 66234 60520 76856 75647 85236 72468 79713 73820 81841 65650 57621 94157 75391 72090 60201 41015 54350 55017 67903 61173 77103 76133 86093 73454 82065 74686 82298 69476 60205 92818 71939 68717 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221610000 21260 4423 19898 40222 32277 32277 1 9606 Homo sapiens 0.06172295882936396 QGIVPPGLTENELWR Unmodified 1707.8944 0.8944193 4537 Q9H9B4;D6RDG7;S4R2X2;D6RFI0 SFXN1 Sideroflexin-1 yes no 0 0 0 7 0 1 61.637 61.676 2 3.1367E-05 18523 20230619_1887_Aki_TMTPro18x_K_F7 114.24 89.022 87103 75836 80743 100890 74360 85533 99699 91289 101670 89415 108030 98469 96638 88459 93315 109160 97745 112780 80525 69617 82592 99595 78441 87772 99106 92888 103620 90756 109980 99300 98871 92645 95290 109520 93583 107030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93013000 21261 4537 19899 40223 32278 32278 1 9606 Homo sapiens 0.06878786872107412 QGLDNVHK Unmodified 909.46683 0.46682918 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;H0YJT3;H0YJU9 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 0 5.5 0.5 1 1 36.176 36.252 3 0.0097461 8079 20230619_1886_Aki_TMTPro18x_K_F6 70.028 26.294 42882 22550 56642 53096 61441 63393 49446 59897 54299 46608 66789 81440 61502 57212 66672 34028 70434 73233 39669 20921 56429 51199 63049 63189 50774 61066 55502 48860 67822 80169 63205 58600 67726 36877 67374 69131 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70843000 21262 3808 19900 40224;40225 32279 32279 1 9606 Homo sapiens 0.008474435778452971 QGLEQFINK Unmodified 1075.5662 0.56620887 3277;882 O60493;O60493-2;O60493-4;Q3SYF1;A0A087X0R6;Q9UMY4;Q9UMY4-1;Q9UMY4-3 SNX3;SNX12 Sorting nexin-3;Sorting nexin-12 no no 0 0 0 4.5 3.5 1 1 55.272 55.334 2;3 0.0042701 16591 20230619_1880_Aki_TMTPro18x_K_F1 101.65 33.63 72305 54283 60828 62982 53654 76897 69255 72803 88240 88560 68803 77779 106270 83347 60063 130360 117730 121660 66736 49790 62675 63088 56917 76570 69510 75044 88131 88355 73153 79703 105110 88316 65459 129510 112110 115630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113720000 21263 3277;882 19901 40226;40227 32280;32281 32280 2 9606 Homo sapiens 0.03144841471953441 QGLGPSGTSGAR Unmodified 1086.5418 0.54178503 4749 Q9Y5Q8-2;Q9Y5Q8;Q9Y5Q8-3;Q5T7U1;B7Z1V3;H7BY84;H0Y5D2;Q9NXK9 GTF3C5 General transcription factor 3C polypeptide 5 yes no 0 0 0 7 0.816 1 1 1 31.849 31.893 2 4.8755E-05 6049 20230619_1887_Aki_TMTPro18x_K_F7 131.12 94.415 28806 16078 36654 31900 42355 51249 38897 44087 42256 29858 40322 43533 45155 39446 39571 21664 53740 41118 26643 14867 36645 31146 43465 50139 39546 45127 42740 31377 41696 43401 45686 39901 41007 23214 51194 38894 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 32903000 21264 4749 19902 40228;40229;40230 32282;32283 32283 2 9606 Homo sapiens 0.0019758131841172144 QGLLPVLESLK Unmodified 1195.7176 0.71762413 2781 CON__P15497 yes yes 0 0 0 3 0 1 63.844 63.875 3 0.0090854 20055 20230619_1882_Aki_TMTPro18x_K_F3 74.611 63.242 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21265 2781 19903 40231 32284 32284 1 0.12759402779784068 QGLQTTQAHLER Unmodified 1380.711 0.71097563 495 Q14C86-6;Q14C86;Q14C86-2;Q14C86-5;Q14C86-4;A0A024R8A2;A0A024R862;F8W9S7;Q14C86-3;A0A024R875;B3KN67;B3KTX2 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 0 0 0 5.5 0.5 1 1 33.896 33.962 3 4.3128E-24 7235 20230619_1886_Aki_TMTPro18x_K_F6 246.63 213.68 44664 30336 43998 42466 53152 48440 44940 42513 59503 59772 59000 52342 61261 47232 50573 56928 65847 53305 41251 27891 44859 41961 54212 48417 46243 44301 59808 59272 60595 53307 61924 49430 52486 56835 62768 50714 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76738000 21266 495 19904 40232;40233 32285;32286 32286 2 9606 Homo sapiens 0.03584857881105563 QGLSSSIFTK Unmodified 1066.5659 0.56587452 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GW82;A0A1B0GUA1;A0A1B0GTJ4;A0A1B0GV49 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 3 0 1 53.295 53.348 2 0.00030359 15611 20230619_1882_Aki_TMTPro18x_K_F3 132.55 88.108 212130 176810 199060 192740 208080 238990 224120 216010 234720 227560 241790 258820 265350 228630 255580 259850 265380 277380 196070 162020 203410 194040 215930 237670 225400 222580 238840 230340 248940 260290 269620 238480 260630 261610 253900 263220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120680000 21267 1415 19905 40234 32287 32287 1 9606 Homo sapiens 0.03525421752101465 QGMDLSANQDEETDQETFQLEIDRDTK Oxidation (M) 3171.3786 0.3786102 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 1 1 1 0 1 53.965 53.965 4 5.8826E-20 15998 20230619_1880_Aki_TMTPro18x_K_F1 158.94 149.39 27114 22014 24166 28575 26015 26408 29857 28222 24420 27207 32361 35086 30318 27326 30621 34383 31687 39297 25048 20208 24848 28286 26948 26915 29720 28697 25506 27772 32768 35002 31028 28811 31216 34700 30360 37245 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48536000 21268 1426 19906 40235 32288 32288 899 1 9606 Homo sapiens -0.12022396169095373 QGMDLSANQDEETDQETFQLEIDRDTKK Oxidation (M) 3299.4736 0.47357322 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 1 2 2 0 1 52.047 52.086 4 9.4206E-14 15358 20230619_1881_Aki_TMTPro18x_K_F2 123.53 116.52 17405 14689 15956 15664 15386 13741 17169 15778 11801 17498 20161 15010 18090 13885 17839 15286 15390 15732 16086 13457 16315 15727 16036 14105 17054 16030 12677 17499 20171 15327 18496 14446 17995 15374 14752 14936 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39593000 21269 1426 19907 40236 32289 32289 899 1 9606 Homo sapiens -0.0841846269790949 QGNLSSQVPLK Unmodified 1169.6404 0.64043645 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 1 0 1 46.73 46.73 2 0.00091583 13023 20230619_1880_Aki_TMTPro18x_K_F1 106.2 55.592 33519 21946 26541 33433 30386 35680 30249 30426 40930 46812 47589 61227 54560 49404 34192 77292 70147 66970 30902 20201 27641 32821 31309 35774 30843 31896 41398 46864 48877 61104 54561 52779 37351 76506 66747 63729 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35569000 21270 3758 19908 40237 32290 32290 1 9606 Homo sapiens 0.06240184563466755 QGNLSSQVPLKR Unmodified 1325.7415 0.74154747 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 3.5 0.5 1 1 40.841 40.891 3 3.1989E-07 9928 20230619_1883_Aki_TMTPro18x_K_F4 159.77 136.89 416330 426760 458490 445570 561170 501050 510910 490400 432530 420610 450980 281370 327390 240620 522420 236010 250050 172630 385900 390640 463560 449460 572060 502730 515760 499830 445870 424490 455740 290900 346680 249520 511170 234730 241340 164920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 393150000 21271 3758 19909 40238;40239 32291 32291 1 9606 Homo sapiens 0.09170636266162546 QGNMTAALQAALK Unmodified 1315.6918 0.69182009 3245 O15511;B1ALC0 ARPC5 Actin-related protein 2/3 complex subunit 5 yes no 0 0 0 3 0 2 58.349 58.379 2;3 5.3308E-05 17758 20230619_1882_Aki_TMTPro18x_K_F3 111.31 79.305 97770 80911 79755 87840 97129 132280 103660 93625 122100 64294 53553 51534 58132 45787 74083 55232 58676 58250 90273 74141 82865 88706 99958 129450 104610 97542 120460 66315 58410 52716 59939 47959 74095 55582 56287 55296 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 228260000 21272 3245 19910 40240;40241 32292;32293 32292 2 9606 Homo sapiens 0.04660185265856853 QGNVLPLWGNEK Unmodified 1353.7041 0.70409934 4075 Q5VTL8;Q5VTL8-2;Q69YH0 PRPF38B;DKFZp434O1172 Pre-mRNA-splicing factor 38B yes no 0 0 0 1 0 1 58.04 58.04 2 0.0048077 17731 20230619_1880_Aki_TMTPro18x_K_F1 94.801 62.867 13754 14527 13299 15380 13925 14420 15751 15807 17192 16405 15962 17170 19347 15938 15784 18428 19078 19891 12737 13298 13569 15456 14456 14696 15820 16071 17389 16571 16591 17353 19468 16619 16309 18553 18228 18874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10254000 21273 4075 19911 40242 32294 32294 1 9606 Homo sapiens 0.04139545000543876 QGPAETGGQGQPQGPGLR Unmodified 1733.8445 0.844509 3268 O43819;A0A1W2PQK0 SCO2 Protein SCO2 homolog, mitochondrial yes no 0 0 0 5 0 1 36.421 36.513 3 7.1683E-06 8095 20230619_1885_Aki_TMTPro18x_K_F5 106.79 92.628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21274 3268 19912 40243 32295 32295 1 9606 Homo sapiens 0.006940521961723789 QGPGGPTQAPPYPGMNR Oxidation (M) 1739.805 0.80495237 1792 Q8NFD5-1;A0A8Q3S458;Q8NFD5-3;Q8NFD5-2;Q8NFD5;A0A1B0GTJ8;A0A6Q8NVI4;A0A3F2YNW7;H0Y7H8;A0A1B0GWJ2;A0A1B0GV63;A0A1B0GVK1;A0A8J9GB59 ARID1B AT-rich interactive domain-containing protein 1B yes no 0 1 0 8 0 1 39.041 39.028 3 0.017657 9101 20230619_1888_Aki_TMTPro18x_K_F8 48.423 42.006 10176 10168 12907 12235 14886 21994 16495 14549 20510 10169 14314 12006 13972 16698 16452 17728 16521 13879 9443.6 9320.6 12921 12309 15390 21311 16651 15261 20377 10605 14954 12296 14426 17094 16696 17584 15788 13233 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7783900 21275 1792 19913 40244 32296 32296 1157 1 9606 Homo sapiens -0.03535791078911643 QGPGPGGPK Unmodified 793.40825 0.40825167 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 6.5 0.5 1 1 34.062 34.126 2 0.0023073 6938 20230619_1887_Aki_TMTPro18x_K_F7 107.66 80.348 35632 17827 45814 45279 64359 77249 49216 62248 51269 36359 58885 68549 46806 50726 53536 20645 69534 66244 32946 16569 45973 43823 64996 75253 50616 63890 52347 39124 59611 67444 48558 51320 55012 23896 66352 62448 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28994000 21276 1450 19914 40245;40246 32297 32297 1 9606 Homo sapiens 0.003283870033783387 QGPNANLVK Unmodified 939.51378 0.51377937 1775 A0A8I5KVF8;Q6MZM4;Q6MZP3;Q8N3U4;Q8N3U4-2;Q6AI02;B1AMT4;B4DQ46 DKFZp686P16143;DKFZp686I05169;STAG2;DKFZp686P168 Cohesin subunit SA-2 yes no 0 0 0 8 0 1 41.247 41.244 2 0.00083722 10013 20230619_1888_Aki_TMTPro18x_K_F8 121.62 78.619 20890 13726 20758 21693 22977 29311 23508 27458 28719 15299 19496 15729 15607 13258 20269 10809 19025 17068 19292 12640 21142 21341 23744 28990 23838 27838 28541 16147 20250 15878 16276 13640 20406 11283 18201 16152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17948000 21277 1775 19915 40247 32298 32298 1 9606 Homo sapiens 0.04160303128992382 QGPPQKPPGPAGPTR Unmodified 1483.7896 0.7895603 3465 P17600;P17600-2 SYN1 Synapsin-1 yes no 0 0 1 2.5 0.5 1 1 35.791 35.848 3 2.2238E-05 7906 20230619_1882_Aki_TMTPro18x_K_F3 108.09 83.234 29451 23296 26958 27217 8471.9 9183.2 19202 18012 17871 37295 39583 43700 44316 35012 30823 44271 45446 39391 27208 21365 27309 26950 10549 10876 18741 18338 19209 36803 39808 43758 44422 36890 32459 44030 43299 37488 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30865000 21278 3465 19916 40248;40249 32299 32299 1 9606 Homo sapiens 0.06701710186189302 QGPVSQSATQQPVTADK Unmodified 1740.8642 0.86424139 942 A0A0A0MRT2;A0A7P0T961;A0A8V8TQV5;Q9BTA9-5;Q9BTA9-2;Q9BTA9;Q9NZE0;J3QTA0 WAC WW domain-containing adapter protein with coiled-coil yes no 0 0 0 6 0 1 40.834 40.926 3 1.7707E-10 9907 20230619_1886_Aki_TMTPro18x_K_F6 144.73 119.94 16746 11345 14993 16421 19648 21459 19050 18647 23600 20712 23506 21166 27750 21385 17045 22504 29780 22660 15454 10435 15455 16224 20034 21247 19379 19297 23777 20848 24276 21485 27676 22123 18249 22592 28321 21547 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56610000 21279 942 19917 40250 32300 32300 1 9606 Homo sapiens 0.023443834162662824 QGQDNLSSVK Unmodified 1074.5306 0.53055165 3526 V9HW71;P30040;F8VY02 HEL-S-107;ERP29 Endoplasmic reticulum resident protein 29 yes no 0 0 0 5 0 1 40.071 40.161 2 7.1437E-11 9586 20230619_1885_Aki_TMTPro18x_K_F5 184.71 104.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21280 3526 19918 40251 32301 32301 1 9606 Homo sapiens -0.0037324077570701775 QGQETAVAPSLVAPALNKPK Unmodified 2018.116 0.1160394 2536 Q15691;B4DM33;A2VCR0 MAPRE1 Microtubule-associated protein RP/EB family member 1 yes no 0 0 1 2.5 0.5 1 1 52.188 52.24 4 8.7972E-16 15396 20230619_1881_Aki_TMTPro18x_K_F2 156.08 150.17 347900 296280 294470 338160 280060 338610 353690 307670 367720 417710 400030 372350 425280 313040 385560 390110 363960 353000 321370 271580 303680 338080 294330 341710 352730 319570 375380 414810 409850 378000 430930 329160 391590 388740 348370 335720 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 942630000 21281 2536 19919 40252;40253 32302;32303;32304 32302 3 9606 Homo sapiens 0.14770601777786396 QGQGQLVTCSGAFK Unmodified 1479.714 0.71401209 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;F5GWI0;B7Z859 DDB1 DNA damage-binding protein 1 yes no 0 0 0 1.5 0.5 1 1 47.554 47.592 3 9.3544E-07 13369 20230619_1880_Aki_TMTPro18x_K_F1 126.56 100.02 362380 306460 335550 358890 365970 383980 375910 359630 430370 366120 422560 381920 403190 342420 428860 399310 436100 377200 334950 280990 343660 358510 377950 385940 380140 369350 434800 370300 432890 385890 413330 357480 435850 399270 416780 358720 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 462520000 21282 1710 19920 40254;40255 32305;32306;32307 32305 3 9606 Homo sapiens -0.006656350563844171 QGQGQSEPGEYEQR Unmodified 1591.6863 0.68627702 245 B2R642;A8K6A6;A0A024R3I5;P43121;B3KXZ9 MCAM Cell surface glycoprotein MUC18 yes no 0 0 0 1 0 1 31.323 31.323 3 2.2859E-12 6484 20230619_1880_Aki_TMTPro18x_K_F1 190.37 177.23 6354.5 2651.5 8579.9 7798.9 9035.7 10749 9620.7 9740.6 9738.2 6540.5 10957 11580 11770 12024 11689 6316.3 13772 11488 5874.9 2475.3 8534.8 7482.6 9362.8 10607 9673.6 9935.7 9945.4 6943 11227 11538 11997 12082 11970 6749.6 13141 10865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91838000 21283 245 19921 40256 32308 32308 1 9606 Homo sapiens -0.08589866782881472 QGQPVEIER Unmodified 1054.5407 0.5407224 3121 I6MBV4;Q9H4W6-2;H0Y3W9;A8K0Z7;B4E2U8;Q658Y5;E5RFQ1;Q9UH73-2;Q9UH73;Q9H4W6 EBF3;DKFZp667I0324;EBF1 Receptor protein-tyrosine kinase;Transcription factor COE3;Transcription factor COE1 no no 0 0 0 2 0 1 35.863 35.92 2 0.0028464 8063 20230619_1881_Aki_TMTPro18x_K_F2 102.62 47.51 23168 14614 22757 24553 25538 24256 30359 27764 35304 27301 31473 34136 32081 27233 25804 30809 36396 37951 21389 13472 23205 23966 26407 24626 30469 28121 35500 27833 32509 34104 32436 28515 26962 31286 34732 35964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46284000 21284 3121 19922 40257 32309 32309 1 9606 Homo sapiens 0.015633669495173308 QGRPVVICDK Unmodified 1170.6179 0.61792687 3806 Q06210-2;Q06210;A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 1 8 0 1 37.709 37.695 3 0.079873 8563 20230619_1888_Aki_TMTPro18x_K_F8 37.18 12.798 28750 17957 25248 27313 32673 31452 29743 32937 37382 27119 37185 41390 39389 38121 31280 51046 54816 60560 26518 16533 26056 26860 33256 31522 30403 33386 37602 28171 38275 41304 39809 40098 33361 51549 52260 57398 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15367000 21285 3806 19923 40258 32310 32310 1 9606 Homo sapiens 0.039442618941848195 QGRPVVICDKEDTETIK Unmodified 1987.0044 0.004440036 3806 Q06210-2;Q06210;A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 2 6 0 1 42.985 43.079 4 3.29E-10 10796 20230619_1886_Aki_TMTPro18x_K_F6 144.68 114.19 140310 119010 144980 141130 113900 134610 153100 144450 144710 163920 168310 155100 165760 125620 164040 163060 158780 119500 129810 109130 146410 140690 121820 136850 151900 147450 148900 164270 171410 156890 169040 132530 166530 160860 151700 114110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118560000 21286 3806 19924 40259 32311 32311 1 9606 Homo sapiens 0.050417993583550924 QGSDAYDAQTYDVASK Unmodified 1717.7431 0.7431232 4594 Q9NU22;Q6AI22 MDN1;DKFZp686H16106 Midasin yes no 0 0 0 3 0 1 46.85 46.928 3 0.0032903 12737 20230619_1882_Aki_TMTPro18x_K_F3 65.231 55.482 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21287 4594 19925 40260 32312 32312 1 9606 Homo sapiens -0.08703864017070373 QGSITSPQANEQSVTPQR Unmodified 1926.9395 0.93953159 1230 Q9UQ35;A0A140VK53;Q9UQ35-2;I3L4D8;I3L182;Q9UQ39 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 5 0 1 38.517 38.61 3 1.5458E-06 8955 20230619_1885_Aki_TMTPro18x_K_F5 78.78 72.2 20576 9593.1 21376 25067 29561 35893 27351 31832 32885 21592 33418 35881 34835 27333 30374 20596 37219 36296 18981 8925.2 21799 24145 30029 35332 27883 32513 33159 22820 34336 35475 35282 28145 31284 21718 35538 34311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12132000 21288 1230 19926 40261 32313 32313 1 9606 Homo sapiens 0.013139408766846827 QGSKDPAEGDGAQPEETPR Unmodified 1967.8821 0.88207629 3900 Q14697-2;E9PKU7;B4DZ53;E9PNH1 GANAB Neutral alpha-glucosidase AB yes no 0 0 1 2.25 0.829 1 1 2 34.576 34.615 3 1.7688E-24 7826 20230619_1880_Aki_TMTPro18x_K_F1 199.05 181.99 57354 37848 53809 58259 75352 89401 97896 91802 121310 87038 99199 99554 85814 70273 84274 85022 97245 90784 52942 34842 55353 57542 77244 88030 98022 93459 121210 88644 102230 99493 87937 74244 86440 85530 92873 86189 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85555000 21289 3900 19927 40262;40263;40264;40265 32314;32315;32316 32314 3 9606 Homo sapiens -0.06314946119528031 QGSPDQVSPVSEMTSTSLYQDK Unmodified 2383.0849 0.084934781 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 4 0 1 56.917 56.922 3 1.6777999999999998E-23 17049 20230619_1883_Aki_TMTPro18x_K_F4 183.07 162.82 34138 26013 30879 37392 29244 32028 33106 34450 33748 42964 27273 35342 41150 32257 33380 48947 41829 46773 31528 23913 31651 36742 30610 32844 33186 35258 34177 42710 28953 36098 41186 34278 34633 48742 39975 44430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131680000 21290 630 19928 40266 32317 32317 1 9606 Homo sapiens -0.05128428899934079 QGTEIDGR Unmodified 874.41446 0.41445926 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 0 1.5 0.5 1 1 30.578 30.611 2 0.083594 5921 20230619_1881_Aki_TMTPro18x_K_F2 66.273 32.477 23174 11579 26350 22977 39028 36767 27199 30971 27648 19375 33979 40024 30091 31048 32080 9553.9 45749 34750 21401 10713 26661 22432 39157 35990 28148 31720 28358 20839 34443 39335 30975 31184 33205 11438 43564 32779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 362670000 21291 1658 19929 40267;40268 32318 32318 1 9606 Homo sapiens -0.027771395557579126 QGTFHSQQALEYGTK Unmodified 1693.806 0.80599822 2059 Q6IAL5;B2R8A1;A8K4W7;P53597;A0A494C0D1;B7Z438 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes no 0 0 0 7 0.816 1 1 1 42.125 42.182 3 4.6844E-09 10366 20230619_1888_Aki_TMTPro18x_K_F8 144.97 126.38 111400 83150 105110 124640 136190 151550 131320 150990 155110 137140 149810 146890 160250 125350 121640 158320 179500 161380 102900 76480 107890 122750 138920 151120 133460 153840 156440 139640 154340 148020 161370 131810 127760 158630 171060 153310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 423510000 21292 2059 19930 40269;40270;40271 32319;32320 32320 2 9606 Homo sapiens -0.013152534383607417 QGTMPVSLLK Unmodified 1072.5951 0.59506616 1900 A0PJK4;B3KTT0;Q8NFH3;Q8TEA6 NUP43 Nucleoporin Nup43 yes no 0 0 0 3 0 1 55.622 55.663 3 0.0020274 16627 20230619_1882_Aki_TMTPro18x_K_F3 94.465 48.469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21293 1900 19931 40272 32321 32321 1 9606 Homo sapiens 0.061672427767234694 QGTQYTFSSIER Unmodified 1415.6681 0.66810776 315 A0A024R4Z6;Q08945 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 6 0 1 46.191 46.274 2 2.694E-18 12257 20230619_1886_Aki_TMTPro18x_K_F6 240.78 210.79 92670 74578 85273 110810 82971 131000 104460 93524 117680 122630 134250 138070 136250 121610 117670 142230 135440 155950 85624 68568 87418 109080 87280 129930 104480 98974 119800 122890 137050 138900 138160 127060 121100 143290 129560 147900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83004000 21294 315 19932 40273 32322 32322 1 9606 Homo sapiens -0.02309956966973914 QGTYGGYFR Unmodified 1047.4774 0.47739386 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 1.5 0.5 1 1 43.563 43.604 2 0.00021053 11492 20230619_1881_Aki_TMTPro18x_K_F2 143.91 112.68 312760 236810 300080 301330 303270 340900 361140 343760 355640 360980 393170 306830 384200 315050 343000 403730 427790 395920 288970 217400 305990 299580 316280 341750 360630 351420 364110 362250 400650 314690 390430 329540 354510 403650 408270 376250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 352840000 21295 12 19933 40274;40275 32323 32323 1 9606 Homo sapiens -0.04444573767705151 QGVDDAFYTLVR Unmodified 1382.683 0.68302954 636 A0A8I5KUB5;A0A8I5KQ21;A0A3G1LBH1;A0A024RAV5;P01116-2 KRAS GTPase KRas;GTPase KRas, N-terminally processed yes no 0 0 0 6 0 1 59.898 59.96 2 3.0711E-09 18126 20230619_1886_Aki_TMTPro18x_K_F6 176.78 135.38 113190 94451 106600 119020 68363 85790 97268 94455 97689 127940 134370 135080 141050 133770 123440 157420 148920 171480 104630 86668 108340 117750 74890 89471 96506 96873 101060 127670 136440 136800 143010 139250 127440 158490 142390 162640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27331000 21296 636 19934 40276 32324 32324 1 9606 Homo sapiens 0.006995349010139762 QGVDIEAAR Unmodified 957.48796 0.48795855 2285 B2RAH5;O14974-2;O14974;A0A024RBF1;O14974-5;O14974-4;F8VZN8;O14974-3;F8VW28;H0YHL8 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A yes no 0 0 0 2 0 1 37.977 38.04 2 0.00024839 8912 20230619_1881_Aki_TMTPro18x_K_F2 142.56 98.793 57539 43544 49083 53829 63581 68091 67733 65674 80160 69745 83685 75668 82948 68840 73283 83130 93221 84464 53115 39964 50817 53702 65023 67719 68416 67360 81050 70475 85598 76376 84228 71999 75839 83356 88940 80242 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89969000 21297 2285 19935 40277 32325 32325 1 9606 Homo sapiens 0.007514088867083046 QGVEYVPACLVHR Unmodified 1526.7664 0.76638202 3934 Q15527 SURF2 Surfeit locus protein 2 yes yes 0 0 0 8 0 1 46.976 47.025 3 4.2437E-08 12295 20230619_1888_Aki_TMTPro18x_K_F8 134.08 113.21 28523 25812 30305 33394 31180 29692 33569 32423 38967 34191 32931 38159 37668 28204 35494 39466 37747 37960 26405 23684 30663 33053 32343 30382 33874 32998 39152 34580 34319 38209 38170 30028 36277 39382 36096 36069 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29045000 21298 3934 19936 40278 32326 32326 1 9606 Homo sapiens 0.024069480772141105 QGVHAAGAAEAGPLASVPAQSAK Unmodified 2087.076 0.075965495 4358 Q96H79 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 0 0 0 8 0 1 44.074 44.093 3 1.5814E-19 11127 20230619_1888_Aki_TMTPro18x_K_F8 127.01 112.97 14378 11834 12230 12043 16456 17540 14676 14021 16295 13761 14781 13059 13576 12218 12620 19867 15761 15674 13279 10838 12663 12222 16713 17245 14948 14557 16444 13909 15172 13285 13859 13026 13064 19584 15049 14932 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13233000 21299 4358 19937 40279 32327 32327 1 9606 Homo sapiens 0.07591055107241118 QGVLGIK Unmodified 713.44357 0.44357454 3494 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;Q9NQS8;E9PSF4 RPS3 40S ribosomal protein S3 yes no 0 0 0 2.5 0.5 1 1 48.134 48.209 3 0.059258 13345 20230619_1882_Aki_TMTPro18x_K_F3 56.011 8.9437 35206 27560 32270 30511 37966 34360 32945 33693 42497 33447 37876 31600 30709 26018 31740 35274 35364 29530 32523 25264 33086 30640 38815 34468 33811 34455 42539 33776 38721 32006 31623 27505 32476 34970 33761 28130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 297270000 21300 3494 19938 40280;40281 32328 32328 1 9606 Homo sapiens 0.07539049531180808 QGVLTHGR Unmodified 866.47225 0.47224891 1910 Q96DV6;A2A3R6;P62753;A2A3R5 RPS6 40S ribosomal protein S6 yes no 0 0 0 1 0 1 28.002 28.002 2 0.028357 5206 20230619_1880_Aki_TMTPro18x_K_F1 81.548 63.512 10053 6710.2 10816 11046 12397 9843.8 12191 10250 12976 9455.2 12182 10162 10092 9226.7 9462 7561.9 12572 11524 9291.2 6182.3 10944 10779 12712 10060 12325 10432 13128 9626.8 12430 10256 10344 9464.5 9792.7 7854.5 11991 10907 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7351500 21301 1910 19939 40282 32329 32329 1 9606 Homo sapiens 0.03367167160331519 QGVQVQVSTSNISSLEGAR Unmodified 1959.0021 0.0021318501 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 7.5 0.5 1 1 50.953 51.03 2 1.3881E-30 14060 20230619_1887_Aki_TMTPro18x_K_F7 278.33 240.3 100460 89138 98341 91665 63437 78715 80668 82892 85285 134530 132220 119230 138020 104930 113390 132500 129930 129360 92930 81621 99501 92282 69189 80725 80603 85777 88688 132620 133590 121250 139410 110240 116750 132480 124150 122900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 916160000 21302 3606 19940 40283;40284 32330;32331 32330 2 9606 Homo sapiens 0.06099086944914234 QGYENLCCLR Unmodified 1311.57 0.56999039 3574 P41223;P41223-2;C9JCD9 BUD31 Protein BUD31 homolog yes no 0 0 0 6 0 1 45.407 45.493 2 1.2979E-06 11860 20230619_1886_Aki_TMTPro18x_K_F6 191.67 179.08 73973 57795 64493 72360 67468 83631 75814 72104 84699 77388 77618 76908 92572 79851 70835 94275 92112 87476 68309 53043 66408 72010 70170 83423 76224 74613 85508 77956 80603 78237 93004 83023 73713 94061 87894 83174 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78245000 21303 3574 19941 40285 32332 32332 1 9606 Homo sapiens -0.07333180088153313 QGYVIYR Unmodified 897.47085 0.47085192 210 A0A024R2Q4;P61313;A0A2R8YEM3;E7EQV9;E7ENU7;B4DLP4;E7EX53;A0A2R8Y738;P61313-2;B4DEN1;Q96S84 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 0 0 0 3.67 3.09 1 1 1 41.99 42.015 2 0.015923 10719 20230619_1881_Aki_TMTPro18x_K_F2 118.01 61.985 979890 780150 941680 1030800 969600 1083300 1133900 1153600 1011100 1042300 1021400 977430 1371700 931530 892330 1302100 1309900 1126000 905630 716350 960840 1021000 1008900 1092900 1130200 1170600 1038200 1057100 1062200 994650 1364800 982940 941000 1291500 1248000 1072000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1271400000 21304 210 19942 40286;40287;40288 32333;32334;32335 32334 3 9606 Homo sapiens 0.018015330715684286 QHAFGMAENEDFR Unmodified 1550.6572 0.6572255 4190 Q92777;Q86VA8;Q92777-2;Q59GM1;B3KSV8;A0A024R2F6 SYN2 Synapsin-2 yes no 0 0 0 3 0 1 41.845 41.907 3 0.00041137 10412 20230619_1882_Aki_TMTPro18x_K_F3 78.809 65.829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21305 4190 19943 40289 32336 32336 1 9606 Homo sapiens -0.0960768261290923 QHALCVGVMK Oxidation (M) 1157.5685 0.56853383 4682 Q9ULC4;Q9ULC4-3;Q9ULC4-2;A0A3B3IRV3 MCTS1 Malignant T-cell-amplified sequence 1 yes no 0 1 0 2 0 1 39.217 39.283 3 0.0091786 9498 20230619_1881_Aki_TMTPro18x_K_F2 67.334 52.303 109050 58677 92101 102380 101160 113860 119140 113740 132810 114490 148830 156300 132270 96971 104390 139310 160520 150150 100490 54164 95183 99886 104900 114180 119490 116260 135030 116920 151220 154780 134150 104270 109930 139800 152970 142530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133880000 21306 4682 19944 40290 32337 32337 2855 1 9606 Homo sapiens -0.0039476938625284674 QHALYIWEK Unmodified 1186.6135 0.61349341 563;3927 A0A024R9B5;B4DMM7;Q15291;B4DLF8;Q15291-2 RBBP5 Retinoblastoma-binding protein 5 no no 0 0 0 1 0 1 50.007 50.007 3 0.0041474 14363 20230619_1880_Aki_TMTPro18x_K_F1 67.334 39.853 26593 16615 27738 29158 29575 31318 33379 30398 34318 27986 29101 25774 25770 20795 25897 27263 29008 28423 24562 15326 28120 28425 30655 31467 33456 31064 34679 28354 29940 26112 26411 21968 26511 27353 27721 26986 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23737000 21307 563;3927 19945 40291 32338 32338 1 9606 Homo sapiens 0.027651207429244096 QHAMQCVQCK Unmodified 1288.5475 0.54748081 3098 Q53T40;I0CE67;Q6I9R8;Q2TSB7;Q2XQU9;Q14192 FHL2;AAG11 Four and a half LIM domains protein 2 yes no 0 0 0 8 0 1 33.724 33.719 3 0.0001162 6988 20230619_1888_Aki_TMTPro18x_K_F8 106.2 95.369 12141 5028.1 13395 16052 37793 43896 23301 20500 36209 10062 16234 16878 14380 11648 14966 9039.9 19818 16112 11201 4703.6 13891 15614 36977 41699 24689 22273 35282 11013 17517 16648 14774 12058 15440 9542.1 18890 15242 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34551000 21308 3098 19946 40292 32339 32339 1 9606 Homo sapiens -0.08525102757425884 QHAVINYDASTDEHLVK Unmodified 1938.9436 0.94355434 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;B4DL23;E5RIH6;E5RFU8;E5RJT5 CEP170 Centrosomal protein of 170 kDa yes no 0 0 0 4.5 0.5 1 1 43.135 43.197 4 0.031796 10878 20230619_1885_Aki_TMTPro18x_K_F5 50.188 39.992 37123 25306 40111 45082 50652 51377 49639 50767 51941 39304 53201 56087 46062 47060 51686 37207 60590 57301 34314 23338 40684 43949 51699 51436 50184 51606 52774 40861 54249 55851 47567 48303 52865 38726 57863 54224 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113350000 21309 1960 19947 40293;40294 32340 32340 1 9606 Homo sapiens 0.011640303704098187 QHAYEHSLGK Unmodified 1168.5625 0.56252048 1189 A0A140VJN8;O60664-4;O60664-3;O60664;O60664-2 PLIN3 Perilipin-3 yes no 0 0 0 5.5 0.5 1 1 32.317 32.376 4 0.00021757 6655 20230619_1886_Aki_TMTPro18x_K_F6 121.61 105.58 76700 19080 76717 73587 111710 61006 79619 98870 126950 102950 141160 125050 144390 116090 56383 134230 84019 122110 70614 18029 78343 69621 112010 63567 83661 98440 127130 104510 144010 125770 143010 120990 60863 133700 80386 115970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51342000 21310 1189 19948 40295;40296 32341 32341 1 9606 Homo sapiens -0.01501828301934438 QHCCPAGYTCNVK Unmodified 1593.6487 0.64865142 2502 B4DJI2;P28799;K7EKL3;K7EQ05;B4E1G5;P28799-3;K7EQI0 GRN Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 yes no 0 0 0 8 0 1 35.467 35.456 3 1.8957E-21 7653 20230619_1888_Aki_TMTPro18x_K_F8 228.61 221.88 29519 12658 28371 34466 41940 34185 40135 35486 46488 42951 57812 50254 49550 45662 39817 62440 55421 48107 27205 11794 29147 32962 42351 34612 40752 36383 47416 43241 58349 50602 50405 48091 41647 61610 52825 45871 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166010000 21311 2502 19949 40297 32342 32342 1 9606 Homo sapiens -0.12442695845379603 QHCEPQDGVIK Unmodified 1309.6085 0.60848439 2814 D3DS96;Q9NRL2-2;Q9NRL2;Q05CW0;Q32ND1 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 0 0 0 3.5 0.5 1 1 35.724 35.777 3 2.5073E-09 7886 20230619_1882_Aki_TMTPro18x_K_F3 157.03 133.65 52735 17419 44220 52226 60932 56653 53214 57532 68220 67141 77496 74207 89176 73096 52764 71641 83409 86503 48516 16300 45911 49863 61724 56930 54578 58958 69037 67567 79504 74984 88909 75398 56087 72795 79530 81992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68213000 21312 2814 19950 40298;40299 32343 32343 1 9606 Homo sapiens -0.033935511820118336 QHDVQELNR Unmodified 1137.5527 0.55268407 1677 A0A7I2YQ75;Q9NVE5;Q9NVE5-3;B4DHI0 USP40 Ubiquitin carboxyl-terminal hydrolase 40 yes no 0 0 0 2 0 1 28.993 29.065 3 0.00055504 5384 20230619_1881_Aki_TMTPro18x_K_F2 100.48 73.148 10652 8323.9 8290.3 11896 14710 13224 13081 13503 16036 10816 16407 16144 13166 11790 13855 9109.4 12890 14080 9828.9 7650.5 8734 11729 14714 13281 13370 13705 16158 11243 16673 15995 13573 12164 13997 9493.2 12351 13317 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8468800 21313 1677 19951 40300 32344 32344 1 9606 Homo sapiens -0.01059016307294769 QHEADADLINAGK Unmodified 1380.6634 0.66335673 76 A0A024R040;P55809;E9PDW2;B7Z609 OXCT1 Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes no 0 0 0 2.5 0.5 1 1 41.046 41.114 3 5.5092E-08 10060 20230619_1882_Aki_TMTPro18x_K_F3 156.24 136.58 170670 62073 140780 178270 210980 157330 198630 197830 237790 204320 240570 244660 253340 202780 169530 264220 227850 250570 157040 57978 146700 169980 212770 161580 202140 199520 240050 207370 247150 245240 254120 213800 177620 263480 217600 238050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 192210000 21314 76 19952 40301;40302 32345;32346 32346 2 9606 Homo sapiens -0.011748411097187272 QHFEWLVK Unmodified 1085.5658 0.56581494 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 1.5 0.5 1 1 52.223 52.242 3 0.0017882 15263 20230619_1880_Aki_TMTPro18x_K_F1 110.88 75.371 87433 39566 80991 92196 76783 83966 97363 103400 113540 96853 102870 110610 109610 91668 92982 114350 114060 131660 80572 36735 82821 88593 80660 85874 97485 104110 114270 98645 106380 111040 110880 96413 96131 115440 109050 124800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151640000 21315 3598 19953 40303;40304 32347 32347 1 9606 Homo sapiens 0.026454665427536384 QHFISFDTDR Unmodified 1264.5836 0.58364985 2734 C9J0K6;P30626-2;P30626;P30626-3 SRI Sorcin yes no 0 0 0 5 0.816 1 1 1 43.868 43.94 3 5.4487E-05 11184 20230619_1885_Aki_TMTPro18x_K_F5 138.25 114.4 200820 175460 196420 204080 234810 174020 198920 207510 201860 218370 206030 205730 209370 180900 199980 240580 392930 228760 185740 160850 200380 203460 239200 179310 202850 209990 205880 219620 211370 208630 213430 190570 214300 240010 372960 218000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 708950000 21316 2734 19954 40305;40306;40307 32348;32349 32349 2 9606 Homo sapiens -0.03805862993044684 QHFPATPLLDYALEVEK Unmodified 1970.0149 0.014928368 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 7 0 1 62.518 62.554 3 0.00027928 18957 20230619_1887_Aki_TMTPro18x_K_F7 79.837 66.423 272680 142620 188900 173370 168340 270660 223970 151030 285020 325570 303840 291580 416080 224800 211600 387800 402450 482060 250930 131110 198570 173780 178970 263390 224320 167340 287960 318760 315370 295360 410670 243560 230290 391640 383770 456570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2905600000 21317 161 19955 40308 32350 32350 1 9606 Homo sapiens 0.06872150075128047 QHFYPSR Unmodified 933.4457 0.4456998 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;C9JHW9;C9JIH5;C9JWH9;E7EUU4;Q04637-8;C9J2Z7 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 1 0 1 31.283 31.283 3 0.001278 6521 20230619_1880_Aki_TMTPro18x_K_F1 147.69 114.14 23799 13702 25738 25018 31423 34781 29754 31983 35105 22518 27220 24002 25330 21482 25066 27610 27991 23689 21980 12651 26067 24447 32146 34340 30264 32600 35102 23333 28196 24248 25906 22558 25668 27423 26723 22557 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24328000 21318 1676;2901 19956 40309 32351 32351 1 9606 Homo sapiens -0.02368521731000328 QHGDVVSAIR Unmodified 1080.5676 0.56760585 2231 B2R6A3;O14745;B3KSV9;O14745-2 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF;Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 0 0 0 5 0.816 1 1 1 32.833 32.892 3 3.8296E-07 6768 20230619_1885_Aki_TMTPro18x_K_F5 164.48 136.46 118500 68920 113160 104490 94039 105660 144650 141840 149440 142100 155560 145210 169280 127410 124150 163860 157750 137550 109330 63475 115090 102650 100540 107530 143050 142380 152150 143650 159800 146770 170100 133970 129110 162500 150470 130990 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 122520000 21319 2231 19957 40310;40311;40312 32352;32353;32354 32353 3 9606 Homo sapiens 0.030544755607024854 QHGEQLGGGGSGGGGYNNSK Unmodified 1859.8147 0.81466543 2590 E9PR38;B4DU15;H0YEH2;Q5T1Z4;Q5T1Z8;Q14671-4;Q14671-2;Q14671;Q14671-3;E9PMX1;D5HR47;D5HR46 PUM1 Pumilio homolog 1 yes no 0 0 0 5 0 1 32.822 32.904 3 1.4087E-36 6740 20230619_1885_Aki_TMTPro18x_K_F5 221.81 211.15 15906 4287 12407 15018 15341 15551 12905 13660 16615 15447 21057 18586 18753 20516 13135 14736 21112 18591 14620 4035.9 12949 14264 15643 15624 13275 14137 16884 15621 21266 18794 18981 20777 13903 15118 20105 17626 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19746000 21320 2590 19958 40313 32355 32355 1 9606 Homo sapiens -0.08084931539792706 QHGIPIPVTPK Unmodified 1185.687 0.68699271 3376 Q5T6L4;P00966;A8KAP9;Q5T6L5;Q5T6L6;A0A0S2Z3B6;Q8NFZ7 ASS;ASS1 Argininosuccinate synthase yes no 0 0 0 2.5 0.5 1 1 45.297 45.372 3 0.00016324 11981 20230619_1882_Aki_TMTPro18x_K_F3 92.112 65.994 98882 71095 91551 147090 181870 196490 170270 172010 200990 132730 131480 152630 157660 114710 135810 158610 148660 181470 91308 65705 95344 142680 181450 194220 173130 176340 200120 136970 139460 152770 158950 122020 139330 159870 142340 172000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159480000 21321 3376 19959 40314;40315 32356;32357 32357 2 9606 Homo sapiens 0.10157669185400664 QHHDEYEDEIR Unmodified 1469.6171 0.61713482 3324 O75976;O75976-2;B7Z843 CPD Carboxypeptidase D yes no 0 0 0 1 0 1 29.261 29.261 3 0.014233 5704 20230619_1880_Aki_TMTPro18x_K_F1 64.121 55.071 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21322 3324 19960 40316 32358 32358 1 9606 Homo sapiens -0.09888906011838117 QHICHIQGCGK Unmodified 1336.6129 0.61285826 2728 C4PGM0;Q59EY3;P08047-3;P08047-2;P08047 Sp1;SP1 Transcription factor Sp1 yes no 0 0 0 4.5 3.5 1 1 30.388 30.396 4 1.9018E-06 6150 20230619_1880_Aki_TMTPro18x_K_F1 159.83 122.1 63035 17932 47676 54333 59378 45283 55197 55837 71640 58411 63494 60663 72125 62188 45298 67013 83826 66001 57931 16809 49892 51697 60546 46703 56399 56395 71704 58991 65845 61561 72114 64349 48769 67149 79708 62764 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 43982000 21323 2728 19961 40317;40318 32359;32360 32359 2 9606 Homo sapiens -0.0419836524006314 QHIDAVAR Unmodified 908.48281 0.48281359 3008 G3V529;Q9GZR7;B4DM03;B4DKV2;Q9GZR7-2;Q59FS7;A0A1W2PRR2;F5GYL3;B4E300;Q7Z4W0;A0A087WXU8;Q7Z4X3 DDX24 ATP-dependent RNA helicase DDX24 yes no 0 0 0 4 0.816 1 1 1 27.865 27.954 3 0.0014413 5130 20230619_1885_Aki_TMTPro18x_K_F5 114.5 22.871 41042 22558 43586 41403 59432 54629 51343 49697 57014 46614 61134 58530 57247 45076 49982 43261 58041 53184 37892 20836 44276 40412 60169 54120 52414 51029 57885 47651 62334 58418 58178 46868 51356 44088 55422 50427 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 36776000 21324 3008 19962 40319;40320;40321 32361;32362;32363;32364 32364 4 9606 Homo sapiens 0.024911498147503153 QHINNQQQPPQLR Unmodified 1599.823 0.82298569 3275 O60333-3 KIF1B Kinesin-like protein KIF1B yes yes 0 0 0 7.5 0.5 1 1 31.871 31.92 3 2.8568E-11 6314 20230619_1888_Aki_TMTPro18x_K_F8 186.46 163.78 11066 8868.5 13305 10884 12294 13545 11098 13239 15215 17692 15308 13147 16726 14447 10893 15181 17964 15486 10248 8136.8 13297 10868 12819 13489 11401 13651 15292 17502 15739 13596 16756 14904 11591 15249 17103 14714 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13989000 21325 3275 19963 40322;40323 32365 32365 1 9606 Homo sapiens 0.04706711958147025 QHIPYREDK Unmodified 1184.5938 0.5938206 1563 P48729-2;P48729;U3KPX3;A0A590UJ43;V9HW00;P48729-3;A0A5F9W493;Q6PJ06;B4DER9;Q05DL3;B4E1D9;E7ETM0;D6REM4;B4DFH4;U3KQ83;Q8N752 CSNK1A1;HEL-S-77p;CSNK1A1L Casein kinase I isoform alpha;Casein kinase I isoform alpha-like yes no 0 0 1 5.5 0.5 1 1 32.5 32.559 4 0.0010893 6715 20230619_1886_Aki_TMTPro18x_K_F6 114.4 99.722 106890 35100 92270 109870 114520 92829 118120 118880 157850 125700 143680 132370 164410 122990 91336 167070 151640 130280 98359 32881 95352 104450 117120 95701 120080 119850 157900 126930 148790 133900 163610 129520 97902 164900 144350 124210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 124460000 21326 1563 19964 40324;40325 32366;32367 32367 2 9606 Homo sapiens 0.008907447321689688 QHIQDGALR Unmodified 1036.5414 0.5413911 1401 Q13724;A0A384MDR6;Q58F09;Q13724-2;A0A8I5KTK5;A0A8I5KQG9;A0A3B3ITC1;B8ZZE2;A0A3B3ITU6;C9JDQ1;A0A3B3IRI7 MOGS;GCS1 Mannosyl-oligosaccharide glucosidase yes no 0 0 0 4 0.816 1 1 1 29.936 30.015 3 1.1038E-06 5545 20230619_1883_Aki_TMTPro18x_K_F4 166.07 127.29 36737 17085 34081 38419 53283 46754 38076 47710 64142 41268 48577 47775 50369 38103 42645 39850 51189 46961 33858 15849 35135 37113 53384 46655 40083 48468 63188 42289 50625 47878 50963 39745 43952 40429 48866 44544 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 101450000 21327 1401 19965 40326;40327;40328 32368;32369 32368 2 9606 Homo sapiens 0.024582063892239603 QHIQVFIDR Unmodified 1154.6196 0.61964142 1135 B4DRU9;A0A0S2Z5L1;Q9NUQ8-2;Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 yes no 0 0 0 7 0 1 41.826 41.898 3 0.00068941 10050 20230619_1887_Aki_TMTPro18x_K_F7 94.309 62.937 27347 23366 27139 28147 26574 27866 31521 32411 38890 35158 35891 29967 37130 31582 34984 37988 39420 37208 25293 21430 27584 28040 27777 28311 31724 32863 39072 35236 36980 30743 37760 32870 35872 38021 37659 35357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11414000 21328 1135 19966 40329 32370 32370 1 9606 Homo sapiens 0.048516389744463595 QHLEETTQK Unmodified 1112.5462 0.54620171 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 3 0 1 32.365 32.443 3 0.00088424 6521 20230619_1882_Aki_TMTPro18x_K_F3 99.973 72.67 20568 8014.5 19199 23107 31604 27632 24864 26779 30681 19093 26648 31419 24561 21334 24595 15544 28484 25367 18946 7482.2 19817 22119 31620 27564 25636 27211 30726 20095 27473 30965 25142 22035 25170 16298 27194 24001 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20355000 21329 3440 19967 40330 32371 32371 1 9606 Homo sapiens -0.005569542586727039 QHLEITGGQVR Unmodified 1236.6575 0.65748349 2024;1277 A0A1B0GVU9;Q9H3A5;Q9BUZ3;B4DDN1;Q96AW5;A0A0U1RR66;Q53HS0;A8K3A8;P47897-2;P47897;B4DNN3;C9J165 QARS Glutamine--tRNA ligase no no 0 0 0 6 0 1 35.284 35.337 3 0.00023605 7771 20230619_1886_Aki_TMTPro18x_K_F6 94.584 61.637 56638 28548 51678 49315 61446 50594 63142 62174 80821 46018 49711 53400 58568 45389 41663 50041 53600 54504 52208 26359 53023 48110 62997 51339 64081 62288 79992 47650 52859 53609 58684 47354 43367 50440 51175 51717 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122770000 21330 1277;2024 19968 40331 32372 32372 1 9606 Homo sapiens 0.048621051692634865 QHLENDPGSNEDTDIPK Unmodified 1907.8497 0.84971353 2268 V9HW51;B2R960;O43396;Q59G46;K7ER96;K7EML9 HEL-S-114;TXNL1 Thioredoxin-like protein 1 yes no 0 0 0 1 0 1 40.489 40.489 3 4.4501E-14 10315 20230619_1880_Aki_TMTPro18x_K_F1 165.9 155.24 100200 25714 66118 88513 110180 80028 90650 91234 127420 112870 123790 116590 138620 98614 75505 157330 103010 134980 91996 24210 70738 83970 110260 81816 93629 93020 127590 113050 127660 117710 137880 105470 79882 155640 98517 128320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117100000 21331 2268 19969 40332 32373;32374 32373 2 9606 Homo sapiens -0.06789733522532515 QHLGATGGPGAQLGASFLQAR Unmodified 2036.0552 0.055170474 371 A0A1B0GW73;H3BRN7;H3BNF1;A0A1B0GTV3;H3BTY4;A0A0S2Z5D0;H3BUV4;A0A1B0GUD2;H3BUT1;A0A1B0GTU6;A0A0S2Z5G3;A0A024R601;Q9NWW5 CLN6 Ceroid-lipofuscinosis neuronal protein 6 yes no 0 0 0 4 0 1 50.427 50.458 3 6.5669E-35 14192 20230619_1883_Aki_TMTPro18x_K_F4 218.22 202.08 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21332 371 19970 40333 32375 32375 1 9606 Homo sapiens 0.078585095182234 QHLNPPGGK Unmodified 946.49846 0.49846366 1969 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2;H3BMV3;H3BMT0;H3BTV5;B4DL85 HN1L Hematological and neurological expressed 1-like protein yes no 0 0 0 8 0 1 33.549 33.545 3 0.0024891 6877 20230619_1888_Aki_TMTPro18x_K_F8 87.308 74.271 36749 14458 37658 38233 45702 45613 44577 45528 47199 32358 50985 62215 49427 43263 45187 28904 46707 51680 33878 13471 38299 36712 46758 45521 45101 46178 48011 34322 52141 61100 50291 44496 46016 30614 44709 48826 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55331000 21333 1969 19971 40334 32376 32376 1 9606 Homo sapiens 0.023074363318187352 QHLSNMEVQVASQSSQR Oxidation (M) 1943.9119 0.91193663 3440 P12270 TPR Nucleoprotein TPR yes yes 0 1 0 5 0 1 33.387 33.472 3 0.00098545 6959 20230619_1885_Aki_TMTPro18x_K_F5 73.208 63.151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21334 3440 19972 40335 32377 32377 2069 1 9606 Homo sapiens -0.022262856551833465 QHMGYAK Unmodified 833.38541 0.38540773 3127 Q86Y74;J3KPP4;O95232;Q6PKC2;A8K3C5;B4DJ96;H0YA81 CROP;LUC7L3 Luc7-like protein 3 yes no 0 0 0 8 0 1 32.687 32.687 3 0.0061679 6583 20230619_1888_Aki_TMTPro18x_K_F8 102.72 70.785 34675 13635 42694 40692 61307 57069 43103 56181 63493 33661 50553 52974 44844 42845 47185 20761 55485 41829 32020 12739 42950 39038 61654 56405 45175 56809 62906 35859 52242 52520 46102 43358 48240 22499 52913 39556 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15777000 21335 3127 19973 40336 32378 32378 1 9606 Homo sapiens -0.03794955385740195 QHNEDILEYK Unmodified 1287.6095 0.60953025 3261 Q6IAZ9;O43677 NDUFC1 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial yes no 0 0 0 3.5 0.5 1 1 44.249 44.307 3 0.00058512 11526 20230619_1882_Aki_TMTPro18x_K_F3 97.452 82.761 74694 46853 65865 81050 90163 84894 95630 88695 120900 72017 80871 81290 73678 82970 66846 93775 81969 81540 68899 43209 68097 79026 91813 85621 96800 89936 119970 74071 84537 82223 75278 85978 69082 93310 78278 77578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122070000 21336 3261 19974 40337;40338 32379 32379 1 9606 Homo sapiens -0.02277013541447559 QHPFYFK Unmodified 965.47594 0.4759373 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;A0A8V8TR41 NAA15;NARG1 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 3 0 1 45.12 45.196 3 0.0045559 11920 20230619_1882_Aki_TMTPro18x_K_F3 105.12 65.115 402010 291060 356200 373270 369560 393190 426450 390690 413970 402330 386940 375150 386280 319080 418530 425590 445550 388200 371110 267280 365960 370490 384200 396050 426250 399720 421450 405120 398340 380280 395790 336640 426530 423870 425640 369320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 225820000 21337 2297 19975 40339 32380;32381 32381 2 9606 Homo sapiens -0.00818163065821409 QHPQPYIFPDSPGGTSYER Unmodified 2175.0021 0.0021318501 1518 A0A3B3IT57;A0A7I2V620;E9PH64;B7Z7N1;E7EWZ0;E9PF49;Q9Y6M9 NDUFB9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes no 0 0 0 5.5 0.5 1 1 46.117 46.199 3 5.1958E-08 12207 20230619_1886_Aki_TMTPro18x_K_F6 118.66 109.62 62043 49214 57244 60726 55381 75624 59613 57878 64881 64753 79004 83184 79658 63986 77288 88833 85895 77500 57321 45158 58556 60561 57916 74897 60052 60557 66350 65638 80458 82990 81143 67928 79170 88206 82042 73761 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 354970000 21338 1518 19976 40340;40341 32382 32382 1 9606 Homo sapiens -0.038369130551018316 QHPVPPPAQNQNQVR Unmodified 1708.8757 0.87574954 3947 Q15942;Q96AF9;Q28617;B4DY85;H0Y2Y8;Q9BUS0;Q15942-2;B4DQR8 ZYX Zyxin yes no 0 0 0 7.33 0.471 2 1 27.046 27.123 3 1.5725E-10 3755 20230619_1887_Aki_TMTPro18x_K_F7 150.49 120.55 14941 8762 15323 20254 21950 23312 28396 29948 41310 26689 21156 23430 31476 19747 15531 33022 26573 22415 13786 8112.2 15551 19525 22458 23437 28493 29911 40521 27070 23097 23821 30920 21211 16634 32234 25290 21418 3 2 3 3 4 3 3 3 4 4 4 4 3 4 3 3 4 4 95258000 21339 3947 19977 40342;40343;40344 32383;32384;32385;32386 32383 4 9606 Homo sapiens 0.04966670020917263 QHQAQLQEHIK Unmodified 1358.7055 0.70549632 1697 C9J835;B7Z3P7;Q8N879;A0A7P0TAB5;C9JD56;B5MCF1;A0A7P0T8F4;Q75N08;C9J1W4;C9IZS0;Q9UKV0-11;Q9UKV0-9;Q9UKV0-10;Q9UKV0-8;Q9UKV0-3;Q9UKV0-4;Q9UKV0-2;Q9UKV0;Q9UKV0-6;Q9UKV0-5;Q9UKV0-7 HDAC9 Histone deacetylase 9 yes no 0 0 0 6 0 1 32.342 32.379 4 3.999E-09 6657 20230619_1886_Aki_TMTPro18x_K_F6 184.03 146.85 40941 10576 26781 27369 31675 19333 22180 22342 29034 29156 46737 49788 35650 37840 34934 44109 44351 48390 37587 9889.5 28426 26132 32190 20246 23156 22828 29870 29720 46646 49212 36755 39709 36110 44438 42372 45901 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16296000 21340 1697 19978 40345 32387 32387 1 9606 Homo sapiens 0.04049179089338395 QHQDMPAPRPPGPR Oxidation (M) 1598.7736 0.77359266 3971 Q3ZCU6;Q9UBV2 SEL1L Protein sel-1 homolog 1 yes no 0 1 1 6 0 1 23.268 23.309 4 0.047692 3897 20230619_1886_Aki_TMTPro18x_K_F6 65.805 45.699 5380.9 2740.3 7163.4 7841.7 8124.2 7710.5 6597 5666.7 7569.9 5959.8 6949.8 12183 7594.2 6396.8 7495.2 6283.5 8350.7 7150.6 4977.5 2553.2 7144.3 7485.1 8308 7754.3 6771.4 5949.6 7630.2 6196.9 7225 11865 7726.1 6777.5 7662.9 6371.2 7973.3 6786.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3885800 21341 3971 19979 40346 32388 32388 2628 1 9606 Homo sapiens -0.0018431932235216664 QHQMQLVDSIVR Oxidation (M) 1468.7456 0.74564657 3440 P12270;P12270-2;Q58F23;Q504U6;A0PJC9 TPR Nucleoprotein TPR yes no 0 1 0 7 0 1 40.787 40.855 3 9.1793E-06 9614 20230619_1887_Aki_TMTPro18x_K_F7 133.15 105.67 22570 14196 28734 29510 30967 28695 27331 33156 41693 35487 36254 32951 38472 30939 28498 33362 149630 44585 20886 13129 28704 28513 31859 29169 28230 33607 41438 35672 37507 33503 38885 32144 35805 34097 141270 42613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82738000 21342 3440 19980 40347 32389 32389 2070 1 9606 Homo sapiens 0.030023576975736432 QHQMQLVDSIVR Unmodified 1452.7507 0.75073195 3440 P12270;P12270-2;Q58F23;Q504U6;A0PJC9 TPR Nucleoprotein TPR yes no 0 0 0 8 0 1 46.105 46.143 3 2.2057E-24 11913 20230619_1888_Aki_TMTPro18x_K_F8 256.71 231.49 42326 23213 37464 44354 34405 38081 38663 41077 54314 43427 47728 53364 60047 41644 42026 52864 48135 52730 39019 21454 38454 42935 36135 39020 39229 41836 54156 44079 49831 53319 59974 43972 43449 52905 46028 50068 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222980000 21343 3440 19980 40348 32390 32390 1 9606 Homo sapiens 0.04246661560182474 QHQNTMEDK Unmodified 1129.4822 0.48222124 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 3 0 1 28.988 29.09 3 0.0094831 5263 20230619_1882_Aki_TMTPro18x_K_F3 63.283 44.538 3441.6 2732.2 5122 4990.2 11085 6534.3 6518.6 8380.5 6560.2 4215.1 6105.8 9153.7 5468.5 5473.5 7438.8 2916.1 7669.7 6886.1 3194.6 2519.1 5144.7 4873.6 10868 6542.4 6842.1 8316.8 6659.6 4629.2 6284 8928.5 5701.1 5629.9 7516.1 3209.7 7330.7 6501.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4111200 21344 3758 19981 40349 32391 32391 1 9606 Homo sapiens -0.07734057687275708 QHSVVPSQIFELEDGTSSYK Unmodified 2250.0804 0.080441751 1144 C9IYN3;A8K894;V9GYK2;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9-4;Q8WVV9;B7WPG3;Q8WVV9-5;H7C464 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 0 0 0 6 0 1 56.987 57.058 3 7.8352E-05 16876 20230619_1886_Aki_TMTPro18x_K_F6 80.236 70.071 46042 32110 42836 48108 41096 46586 45483 46433 50209 51128 51479 53271 58674 46323 45597 57120 52825 58012 42510 29542 43786 47229 42961 47201 45769 47581 50955 51479 53073 53749 59010 48602 47060 57243 50508 55071 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84785000 21345 1144 19982 40350 32392 32392 1 9606 Homo sapiens 0.005404747395004961 QHTFVETESVR Unmodified 1331.647 0.64697839 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;Q6P1Q5 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 0 3 0.816 1 1 1 34.694 34.75 3 9.1905E-13 7461 20230619_1882_Aki_TMTPro18x_K_F3 177.04 156.2 91899 40495 78712 82101 99231 96023 90786 95110 108960 97103 112500 109420 122210 91986 91793 107700 120920 102270 84631 37513 81361 79611 101170 95980 92607 97261 110100 98417 115620 109960 122910 96328 95560 107640 115280 97260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 524600000 21346 2181 19983 40351;40352;40353 32393;32394 32394 2 9606 Homo sapiens -0.005579222758569813 QHTGERPFTCAECGK Unmodified 1776.7672 0.76718665 905 A0A090N8Z2;A8K9F5;A0A090N8H1;Q9BWE0;Q9BWE0-4 REPIN1 Replication initiator 1 yes no 0 0 1 5.5 0.5 1 1 33.534 33.597 4 0.0012512 7083 20230619_1886_Aki_TMTPro18x_K_F6 85.469 49.077 31757 9747 29664 28904 31481 24762 29935 31909 34532 29480 39123 38018 41212 34026 30378 38221 36707 36478 29234 9124.7 30313 27539 32445 25506 30434 32044 35079 30183 39992 38097 41472 35446 31474 38225 35058 34666 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49746000 21347 905 19984 40354;40355 32395 32395 1 9606 Homo sapiens -0.09012625335981284 QHTIMPSK Unmodified 940.48004 0.4800364 1161;3805 Q13126-2;Q13126-3;B4DUC8;A0A384ME80;Q13126;Q13126-4;A0A140CZL4;J3QSB7;Q6FHT1;Q6FHP1;A0A140CZL5;Q13126-7;Q13126-6;Q13126-5;A0A140CZL6;Q05DJ2;Q8WV80 MTAP S-methyl-5'-thioadenosine phosphorylase;Purine nucleoside phosphorylase no no 0 0 0 8 0 1 36.429 36.416 3 0.039238 8078 20230619_1888_Aki_TMTPro18x_K_F8 58.433 32.874 19735 15027 22452 20353 25527 26662 27179 27716 32612 22350 28842 25562 27753 22391 26010 24861 30379 25986 18261 13804 22616 20205 26301 26502 27474 28090 32721 22989 29699 25719 28273 23337 26711 25013 28994 24686 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13307000 21348 1161;3805 19985 40356 32396 32396 1 9606 Homo sapiens 0.00741558365587025 QHTVPLEEQTELESER Unmodified 1923.9174 0.91739917 2149 E9PNH0;B3KWF0;Q8WVV2;H0YCD7;B3KP32;B4DMI4;A8KAD5;Q9H0X9-3;Q9H0X9-2;Q9H0X9 OSBPL5 Oxysterol-binding protein;Oxysterol-binding protein-related protein 5 yes no 0 0 0 1 0 1 40.777 40.777 3 0.0018357 10386 20230619_1880_Aki_TMTPro18x_K_F1 53.255 43.198 14556 6777 16965 17505 18509 23114 16258 19862 21832 14465 22749 27536 19307 19791 19720 14421 27187 25830 13442 6303.7 17061 16846 19068 22840 16712 20367 21924 15315 23179 27075 19864 20378 20426 15236 25931 24418 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15463000 21349 2149 19986 40357 32397 32397 1 9606 Homo sapiens -0.007602835917168704 QHVTEAFQFHF Unmodified 1389.6466 0.64658446 1334 O43175;A0A286YF22;V9HW79;B3KSC3;A0A286YFA2;Q9UMY2;Q8N5M8;Q9UMY3;Q96RV8 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 7.5 0.5 1 1 53.763 53.832 3 0.00028849 15285 20230619_1887_Aki_TMTPro18x_K_F7 103.65 93.125 82590 65425 82784 83580 78461 81803 89511 83099 88991 92512 102230 108450 101060 87703 97727 112050 95372 109270 76355 60055 84013 82904 82074 82900 89619 85099 91228 93452 104270 108680 103020 92412 99392 112020 91371 103760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222080000 21350 1334 19987 40358;40359 32398 32398 1 9606 Homo sapiens -0.032652972050073004 QHYIDLK Unmodified 915.48142 0.48141661 3490;3276 O60361;Q32Q12;P22392-2;J3KPD9;Q6FHN3;P22392;F6XY72 NME2P1;NME1-NME2;NME2 Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 0 0 7.2 0.748 1 2 2 42.197 42.247 2;3 0.0020737 10472 20230619_1886_Aki_TMTPro18x_K_F6 125.96 59.704 3456200 1461600 2890300 3049000 3499800 3100400 3665500 3566800 4361100 4346400 5013500 4662900 5042300 3774300 3633800 5360100 4641500 4297500 3181800 1355000 2992500 2947400 3587600 3141200 3707500 3632500 4429200 4359700 5109700 4692400 5075100 4006700 3785100 5296500 4428900 4094300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 8667300000 21351 3276;3490 19988 40360;40361;40362;40363;40364 32399;32400;32401;32402 32399 4 9606 Homo sapiens 0.02029515725996589 QHYPYGGPYDR Unmodified 1351.5945 0.59454889 1061 A0A0S2Q0B1;O14497;O14497-2;H0Y488;A0A1B0GTU5;O14497-3;Q96TA9;Q4LE49;H0YCU6 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A yes no 0 0 0 5.5 0.5 1 1 35.487 35.558 3 0.0012736 7847 20230619_1886_Aki_TMTPro18x_K_F6 88.187 60.858 70482 50511 70529 81576 86824 92335 83849 88462 108920 71836 85957 76367 77348 73694 77788 76929 99812 76861 65122 46511 71951 79913 88826 92422 85479 90188 108490 73711 88832 77292 79329 76238 80292 77269 95128 73088 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 43303000 21352 1061 19989 40365;40366 32403;32404;32405 32405 3 9606 Homo sapiens -0.0671846061877659 QIAASSQDSVGR Unmodified 1217.6 0.60002819 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 4 0.816 1 1 1 34.588 34.639 2 1.5665E-12 7369 20230619_1883_Aki_TMTPro18x_K_F4 239.36 200.58 27031 16010 42865 38315 60675 63836 45590 51362 52543 41465 60164 66170 58584 51259 58489 21698 62556 63545 25072 14848 42462 37151 61150 62282 47087 53041 53398 43205 61348 65460 59834 51848 59489 24750 59820 59909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77387000 21353 3654 19990 40367;40368;40369 32406;32407;32408 32407 3 9606 Homo sapiens -6.78182695992291E-05 QIAEEDFYEK Unmodified 1270.5717 0.57174776 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 1.8 0.748 2 2 1 51.808 51.837 2;3 7.7117E-05 15258 20230619_1881_Aki_TMTPro18x_K_F2 134.13 119.45 371040 310930 355450 360900 311440 365570 393870 341710 431870 441150 459180 439340 515110 410580 402660 481480 460200 451050 343020 285070 361790 360530 329390 368820 393510 353600 438980 440530 472040 445190 518410 428320 415030 480810 439700 428770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 575220000 21354 1091 19991 40370;40371;40372;40373;40374 32409;32410;32411 32410 3 9606 Homo sapiens -0.052715245269155275 QIALHAELDRR Unmodified 1320.7262 0.72623176 2573 B4DQX8;Q9UKG1 APPL1 DCC-interacting protein 13-alpha yes no 0 0 1 7 0 1 36.94 37.005 4 0.00016966 8086 20230619_1887_Aki_TMTPro18x_K_F7 90.104 58.169 21328 33992 35584 27645 43833 36452 33909 44609 28787 24916 40624 46472 31605 33329 34955 20352 43357 40948 19948 31023 35020 28621 44458 36437 34665 44446 30062 26860 40780 45721 32745 34111 35865 21867 41385 38683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9980900 21355 2573 19992 40375 32412 32412 1 9606 Homo sapiens 0.07869769468970844 QIANSQDGYVWQVTDMNR Oxidation (M) 2139.9644 0.96436614 560 A0A024R983;P10155;P10155-3;P10155-5;P10155-4;P10155-2;D6RDN1;D6RE09 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 1 0 6 0 1 53.293 53.37 3 8.5576E-07 15383 20230619_1886_Aki_TMTPro18x_K_F6 109.72 103.81 31582 29574 30523 27492 36379 35362 40028 39387 30118 38416 40221 30337 33294 26802 43270 31994 28891 37273 29221 27054 31164 28078 37352 35284 39851 39913 31677 38598 40451 31072 34638 28066 42973 32398 27840 35315 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62644000 21356 560 19993 40376 32413 32413 327 1 9606 Homo sapiens -0.060017473122115916 QIATLHAQVADMK Unmodified 1424.7446 0.74458394 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5 MYH9 Myosin-9 yes no 0 0 0 1 0 1 47.509 47.509 3 8.1312E-08 13308 20230619_1880_Aki_TMTPro18x_K_F1 128.9 101.76 51559 38880 44917 45029 50269 60791 56119 54432 64406 63869 56520 61758 75302 60071 59819 64793 71389 71779 47601 35661 46273 45186 52013 60121 56487 56282 64878 63994 59213 62703 75507 62309 61761 65416 68196 68101 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78910000 21357 148 19994 40377 32414 32414 1 9606 Homo sapiens 0.04920143328672566 QIATLHAQVADMK Oxidation (M) 1440.7395 0.73949856 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5 MYH9 Myosin-9 yes no 0 1 0 8 0 1 42.721 42.723 3 9.8742E-05 10579 20230619_1888_Aki_TMTPro18x_K_F8 107.69 88.029 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21358 148 19994 40378 32415 32415 75 1 9606 Homo sapiens 0.036758394660409976 QICSQLSER Unmodified 1119.5343 0.53425682 4729 Q9Y3P9;B7Z2B4 RABGAP1 Rab GTPase-activating protein 1 yes no 0 0 0 5 0 1 38.62 38.711 2 0.00014379 9003 20230619_1885_Aki_TMTPro18x_K_F5 148.5 120.87 34368 27695 33769 37730 38413 37651 39251 36566 50902 44592 47694 47378 49160 38971 39322 53210 60819 50795 31772 25438 34442 37268 39536 38064 39878 37661 51054 44736 49131 47701 49668 41237 41417 53063 57914 48308 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46717000 21359 4729 19995 40379 32416 32416 1 9606 Homo sapiens -0.020728942735104283 QICVVMLESPPK Unmodified 1399.7203 0.72034303 3930;2914 E9PFP8;P57721-4;P57721;Q5MJP6;P57721-5;Q15366-3;Q15366-6;Q15366-7;Q15366-4;B4DLC0;F8VRH0 PCBP3;PCBP2 Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 no no 0 0 0 8 0 1 58.934 58.976 2 2.7691E-07 17368 20230619_1888_Aki_TMTPro18x_K_F8 162.36 134.62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21360 2914;3930 19996 40380 32417 32417 1 9606 Homo sapiens 0.036471668507829236 QIDNPDYK Unmodified 991.46108 0.4610751 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;K7EJB9;B4E2Y9 CALR;HEL-S-99n Calreticulin yes no 0 0 0 3.5 0.5 1 1 41.824 41.877 2 9.985E-05 10311 20230619_1883_Aki_TMTPro18x_K_F4 180.45 121.84 535510 288950 542510 588160 782310 860350 664750 741160 833540 654290 939590 965260 517580 807110 692500 447160 1086400 1008500 494170 267350 554400 572260 790680 845940 682470 762790 842580 675720 940820 959620 552890 817730 721410 487470 1035100 952190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1281700000 21361 1691 19997 40381;40382 32418;32419 32419 2 9606 Homo sapiens -0.03499699724477523 QIDQFANEVER Unmodified 1347.6419 0.64189301 4445 Q9BUT1;D6RFG2;D6R9U8;D6RIR6;B3KY19;A8K5M0;A0A024RDJ8;Q9BUT1-2 BDH2 3-hydroxybutyrate dehydrogenase type 2 yes no 0 0 0 2 0 1 50.43 50.482 2 0.00099592 14676 20230619_1881_Aki_TMTPro18x_K_F2 125.24 85.619 46535 30105 34432 45595 58283 72055 52103 52382 65118 64529 65770 84473 83299 71119 51836 97557 94402 109130 42880 27711 36424 45061 58600 70358 53270 55184 65673 65192 68301 84385 83018 75203 55870 98101 90013 103470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75152000 21362 4445 19998 40383 32420 32420 1 9606 Homo sapiens -0.01802226138443075 QIEEQTIK Unmodified 987.52368 0.52367535 2184 P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;P35241-2 RDX Radixin yes no 0 0 0 3.5 0.5 1 1 42.853 42.908 2 0.0012784 10808 20230619_1883_Aki_TMTPro18x_K_F4 145.17 66.676 113690 69994 142630 132340 135480 139920 123910 129150 144990 145770 196080 173260 184740 143910 156160 111810 193600 181030 105180 64640 142280 128550 140860 140600 126410 133150 148490 147260 198070 173610 187440 147880 161100 116910 184790 171260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 93941000 21363 2184 19999 40384;40385 32421;32422 32422 2 9606 Homo sapiens 0.02941446343709231 QIEETLAHFHLTK Unmodified 1565.8202 0.82019173 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;B3KRA9 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 7 0 1 56.469 56.527 4 2.8281E-11 16386 20230619_1887_Aki_TMTPro18x_K_F7 189.1 155.41 19428 17828 23315 19895 23588 28478 30435 28090 30683 29031 23862 25080 32459 21098 28312 28224 25971 27874 18008 16334 23355 20050 24662 28132 30286 28738 30989 29169 25194 25498 32612 22307 28732 28228 24885 26471 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 504680000 21364 43 20000 40386 32423 32423 1 9606 Homo sapiens 0.05991443780590089 QIEIQFAQGDRK Unmodified 1431.747 0.74702678 1114 Q5JRI1;Q53GD7;A0A0S2Z504;O75494-5;O75494-4;O75494-6;O75494-3;O75494-2;O75494;Q8WXF0 SRSF10;SRSF12 Serine/arginine-rich splicing factor 10;Serine/arginine-rich splicing factor 12 yes no 0 0 1 6.5 0.5 1 1 47.092 47.176 3 5.2097E-07 12253 20230619_1887_Aki_TMTPro18x_K_F7 153.32 110.85 321170 232730 277830 327310 308120 361500 319300 354050 405810 383090 380600 394690 444080 391230 336630 498010 439860 441230 296430 213920 286610 323080 318370 362630 324050 362880 407610 386060 394430 400240 446320 409170 350800 495090 419860 419680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203650000 21365 1114 20001 40387;40388 32424 32424 1 9606 Homo sapiens 0.048423150579765206 QIENVLR Unmodified 870.49232 0.49231565 2657 Q6IBR8;B5BU01;P20042;Q96I16 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 5 0 1 44.492 44.571 2 0.078897 11449 20230619_1885_Aki_TMTPro18x_K_F5 69.825 18.479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21366 2657 20002 40389 32425 32425 1 9606 Homo sapiens 0.05188918100270712 QIEPSLYPK Unmodified 1073.5757 0.57571092 4522 Q9H6T3-3;Q9H6T3-2;Q9H6T3 RPAP3 RNA polymerase II-associated protein 3 yes no 0 0 0 7 0 1 50.75 50.828 2 0.030563 13960 20230619_1887_Aki_TMTPro18x_K_F7 78.934 56.105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21367 4522 20003 40390 32426 32426 1 9606 Homo sapiens 0.04186609757448423 QIESTETSCHGCR Unmodified 1563.6406 0.64058916 913 A0A096LNV3;A0A096LP02;Q9Y508-2;Q9Y508 RNF114 E3 ubiquitin-protein ligase RNF114 yes no 0 0 0 5 0 1 28.492 28.565 3 5.6153E-08 5184 20230619_1885_Aki_TMTPro18x_K_F5 155.98 146.29 1924.7 2217.5 1599 2680.5 936.66 3099.3 2888.3 2521.1 2768.6 2599.9 2945.3 4349.3 3398.5 2517.8 2681.3 2573.3 3941 3681 1781.7 2031.9 1552.7 2672.1 1060.1 3083.3 2793.2 2620.2 2831.7 2675.6 3042.6 4266.8 3418.7 2662.2 2807.6 2647.6 3756.8 3485.4 2 2 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 3243300 21368 913 20004 40391 32427;32428 32428 2 9606 Homo sapiens -0.11868551561133245 QIEYEYK Unmodified 971.46001 0.46001246 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;B4DZT3 LMNB1 Lamin-B1 yes no 0 0 0 4 0.816 1 1 1 46.175 46.241 2 0.0071349 12179 20230619_1885_Aki_TMTPro18x_K_F5 127.56 56.536 646350 470470 672420 673020 708520 835070 600070 578050 692950 871140 1044700 988460 926950 839920 781970 1041000 1199800 1032500 597450 432540 681350 664760 730690 826000 614810 616310 715260 868210 1049500 993440 943550 881590 822140 1041600 1142800 981350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1275900000 21369 3482 20005 40392;40393;40394 32429;32430 32430 2 9606 Homo sapiens -0.026859140933765957 QIFIPILQGLALAAK Unmodified 1594.981 0.98104946 2652 B4E2Y2;O95155-3;O95155-2;O95155;O95155-4;K7EP75 UBE4B Ubiquitin conjugation factor E4 B yes no 0 0 0 8 0 1 67.025 67.044 3 0.00044328 20755 20230619_1888_Aki_TMTPro18x_K_F8 87.18 66.227 7285.4 6204.1 6300.5 7210.6 7371.3 6540.1 7011.8 6022.2 8963.7 7590.5 7584.3 5838.1 8418.1 8031.1 7154.5 9513.8 9955.6 7350.8 6730.8 5688 6501.1 7190.8 7555.3 6659.5 7148.1 6234.7 8965.3 7542.4 7869.9 6091.9 8515.3 8285.1 7463.9 9409.7 9480.3 7014.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9994500 21370 2652 20006 40395 32431 32431 1 9606 Homo sapiens 0.20735818164666853 QIFLGGVDK Unmodified 975.53893 0.53893149 3439;3388 P05141;Q6NVC0;O75961;P12236;Q6I9V5;Q59EI9 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 0 0 1.5 0.5 1 1 54.961 54.972 2 0.00062531 16391 20230619_1880_Aki_TMTPro18x_K_F1 140.75 72.737 210600 163320 174130 220020 190270 231310 238080 239340 268210 255700 245330 245590 275020 221110 215820 314110 284770 281330 194390 150010 180510 217600 197910 233120 238140 244380 270650 257240 254030 249090 276940 233830 224860 312010 271780 267570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 428090000 21371 3388;3439 20007 40396;40397 32432 32432 1 9606 Homo sapiens 0.05018357931567152 QIFLGGVDKR Unmodified 1131.64 0.64004252 3388 P05141;Q6NVC0 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes no 0 0 1 3 0.816 1 1 1 47.788 47.852 3 1.4587E-05 13152 20230619_1882_Aki_TMTPro18x_K_F3 129.82 112.01 1952600 1805900 1839300 1859000 2138900 2463400 2449500 2517600 2680400 1498100 1267800 908090 1168200 832890 1893700 1135700 1081800 773880 1806100 1653400 1883000 1882300 2207200 2446400 2457700 2539800 2657900 1552500 1362300 947840 1228700 878410 1863800 1118800 1040800 740000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1569699999.9999998 21372 3388 20008 40398;40399;40400 32433 32433 1 9606 Homo sapiens 0.07948809634262943 QIFNGTFVK Unmodified 1052.5655 0.56548059 3473 P18124;A0A024R814;A8MUD9;C9JIJ5;C9JZ88 RPL7 60S ribosomal protein L7 yes no 0 0 0 3.5 0.5 2 2 55.777 55.802 2;3 0.00013624 16558 20230619_1883_Aki_TMTPro18x_K_F4 134.25 106.07 217750 182930 213520 212370 219950 284570 231260 245790 279960 152600 154560 130190 141900 125710 216410 164190 152860 133790 201340 167710 217390 213030 228670 281260 234010 251210 277050 158810 163940 133260 148810 131810 214950 162860 146740 127470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 239210000 21373 3473 20009 40401;40402;40403;40404 32434;32435 32435 2 9606 Homo sapiens 0.04130046822888289 QIGASSRPPPNR Unmodified 1278.6793 0.67928157 1771 A0A8I5KT56;Q06787-6;R9WQY1;A8MQB8;A0A8I5KZ21;G3V0J0;X5D907;Q06787-5;Q06787-4;Q06787-7;Q06787-2;Q06787-8;A0A087WXI3;A0A087WVL8;A0A8I5KS01;X5DQX7;A0A8I5KWH0;W5ZQ92;A0A087WY29;R9WNI0;A0A8I5KTZ9;Q06787-3;Q06787-9;Q06787;A0A8I5KUC2;B4DZ17;A0A8I5KTT6;B4DFH8;Q59GC1 FMR1 Fragile X mental retardation protein 1 yes no 0 0 1 3.5 0.5 1 1 23.161 23.27 3 0.00026993 3860 20230619_1882_Aki_TMTPro18x_K_F3 92.112 50.111 22402 14901 18185 22911 31500 29804 24956 27436 33616 25183 31018 28098 30909 25879 23168 21680 32345 30865 20658 13717 19046 22551 31477 29561 25804 28120 33629 25680 31908 28318 31185 26563 24191 22376 30849 29224 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31345000 21374 1771 20010 40405;40406 32436 32436 1 9606 Homo sapiens 0.0510890991783981 QIGDALPVSCTISASR Unmodified 1673.8407 0.84066917 3867 Q13740-2;F5GXJ9;Q13740;B3KNN9;H7C543;Q13740-4 ALCAM CD166 antigen yes no 0 0 0 7.5 0.5 2 2 52.294 52.37 2;3 3.0035E-33 14542 20230619_1888_Aki_TMTPro18x_K_F8 251.24 184.55 81554 70837 84688 89277 114730 130130 136730 133190 160160 124150 97847 97282 134910 89948 94188 162890 113150 114690 75464 64991 86296 89186 117410 128520 137190 135530 159340 125210 104910 99859 134470 96947 97925 159590 108090 109440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 945460000 21375 3867 20011 40407;40408;40409;40410 32437;32438 32438 2 9606 Homo sapiens 0.03070246378115371 QIGDNLIVPGGVK Unmodified 1308.7402 0.74015049 1217 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;D6RF19 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 7.5 0.5 1 1 56.424 56.482 3 0.00011838 16296 20230619_1888_Aki_TMTPro18x_K_F8 97.463 77.676 70370 57090 68255 80966 75388 82623 67832 69087 77540 83735 66224 60355 91108 60712 64126 92995 66391 63720 65049 52459 69683 79775 77553 83102 69155 71913 78118 83139 69505 62391 90798 64377 65968 91210 63482 60842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 447670000 21376 1217 20012 40411;40412 32439 32439 1 9606 Homo sapiens 0.09813002177406815 QIGEIDEQIECYR Unmodified 1651.7512 0.75118546 4384 Q96NB3;J3QQQ3;B2RDT9 ZNF830 Zinc finger protein 830 yes no 0 0 0 2 0 1 54.089 54.117 3 7.8701E-12 16246 20230619_1881_Aki_TMTPro18x_K_F2 192.14 182.61 64951 68595 71150 69938 86805 111370 94936 86450 173190 67111 62531 58348 66261 59310 70775 63780 69986 71309 60215 62772 72027 71082 89404 108880 97510 89507 167240 68877 69491 59691 67801 61399 71806 64469 66979 67645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62029000 21377 4384 20013 40413 32440 32440 1 9606 Homo sapiens -0.04862008301279275 QIGENLIVPGGVK Unmodified 1322.7558 0.75580056 1284;3880;2441;4185 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;A9CQZ4;E5RFU4;A9CQZ2;B3KXQ5;Q14194;B3KV96;E9PD68;X5DQV1;X5DNI1;Q14194-2;Q86U75 DPYSL2;CRMP1 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 1 no no 0 0 0 4.5 3.04 1 1 1 1 56.669 56.702 3 7.2793E-05 16432 20230619_1888_Aki_TMTPro18x_K_F8 107.17 87.379 1060800 822780 983790 1044500 772480 881960 1008800 901000 961540 1131600 1155600 1149300 1253600 1025800 1151700 1410400 1270300 1404900 979960 755260 1003000 1034600 825530 904690 1002400 926070 990700 1131400 1180900 1162300 1271200 1082800 1181000 1409900 1215200 1333900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 7255499999.999999 21378 1284;2441;3880;4185 20014 40414;40415;40416;40417 32441;32442;32443;32444 32444 4 9606 Homo sapiens 0.10733288694450493 QIGLDQIWDDLR Unmodified 1470.7467 0.74669243 898 A0A590UJ56;A0A590UJR3;A0A590UJ50;A0A090N7U0;Q13616;A0A590UJ21;A0A590UJC4;B4DLA3;A0A590UK34;A0A590UJM8;A0A590UJ59;A0A590UJ97 CUL1 Cullin-1 yes no 0 0 0 5 0 1 63.938 63.983 2 0.054784 19753 20230619_1885_Aki_TMTPro18x_K_F5 63.073 46.849 17894 15328 18988 22873 16707 21492 21046 20255 21584 22741 22369 27219 25090 22363 22840 28777 23528 29716 16559 14091 19192 22446 17668 21794 20990 20858 22000 22982 23069 27255 25420 23560 23339 28849 22547 28191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56818000 21379 898 20015 40418 32445 32445 1 9606 Homo sapiens 0.030148953381285537 QIGNVAALPGIVHR Unmodified 1443.831 0.83103118 4728 Q9Y3I0;B4DNG5;B4DXF1 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 3.5 0.5 1 1 50.121 50.176 3 0.0012472 14020 20230619_1883_Aki_TMTPro18x_K_F4 76.728 51.511 87357 85491 95699 103890 96854 101240 129650 107980 98700 116300 141420 108200 107720 116890 91050 139900 134090 128340 80940 78376 96612 103390 101210 102760 127850 110140 103980 116810 141380 110700 110410 121390 95531 139430 127840 122040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1676099999.9999998 21380 4728 20016 40419;40420 32446 32446 1 9606 Homo sapiens 0.12686890945519735 QIGVEHVVVYVNK Unmodified 1482.8195 0.81946344 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 1.5 0.5 1 1 50.262 50.287 3 8.9594E-08 14455 20230619_1880_Aki_TMTPro18x_K_F1 131.53 103.24 255730 215390 244840 257310 274270 300640 314630 304920 362670 263060 258940 254080 295750 258870 279440 291780 307670 278780 236430 197530 250180 257030 283680 300820 316240 310080 362360 268050 272180 258640 300040 268580 286040 291950 293900 265030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 943210000 21381 1417 20017 40421;40422 32447;32448 32447 2 9606 Homo sapiens 0.09736649131559716 QIHEHEQENELR Unmodified 1560.7281 0.72808225 1996 A8K0J3;Q9H2K8;Q9P0C6 TAOK3 Serine/threonine-protein kinase TAO3 yes no 0 0 0 1 0 1 27.779 27.779 4 2.3964E-05 5129 20230619_1880_Aki_TMTPro18x_K_F1 128.57 108.73 4990.7 3494.4 4618.9 5770.1 5793 5091 6095 5731.7 8451.8 7303.7 6667.3 8708.2 9512.2 6631.8 7126 9893.4 8626.9 6592.8 4607.7 3219 4746.5 5627.4 5926.7 5215.2 6196.6 5856.2 8407.9 7341.2 7060.8 8702.5 9497 7081.1 7385.3 9697.8 8225.6 6304.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6277200 21382 1996 20018 40423 32449 32449 1 9606 Homo sapiens -0.029852663036990634 QIHKFEELNR Unmodified 1312.6888 0.68878362 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;B0QY90;B3KNG0;Q7Z5X3;Q8N7H0 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 1 7.5 0.5 1 1 40.156 40.183 3 0.0006672 9562 20230619_1888_Aki_TMTPro18x_K_F8 102.53 86.394 161640 141040 173470 165630 211650 175480 198260 205890 166050 188180 208690 148410 148310 115410 209960 118720 143820 106950 149620 129310 175690 165490 215840 177570 199790 207690 172760 189760 209190 151440 156010 120390 208250 118930 137990 101840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56910000 21383 2176 20019 40424;40425 32450;32451 32451 2 9606 Homo sapiens 0.04494678203377589 QIHQQLYDR Unmodified 1199.6047 0.60471964 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HJ57;A0A804HKT8;A0A804HJ32;B4DE53;I6L959;Q9BTW9-5;A0A804HJU6;I3L439;I3L163;I3L0V3;I3L3H4;I3L4D2;I3L143;I3L131;I3L1S3 TBCD Tubulin-specific chaperone D yes no 0 0 0 6 0.816 1 1 1 33.464 33.533 3 0.0001021 7061 20230619_1886_Aki_TMTPro18x_K_F6 123.86 79.262 42973 31405 42861 43488 56351 56740 49592 56395 55055 46630 66822 70447 54383 55486 64886 48477 74469 60778 39709 28862 43748 43095 57243 56358 50593 57355 56190 48371 67507 69911 56465 57311 66225 49583 71064 57648 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143750000 21384 1722 20020 40426;40427;40428 32452 32452 1 9606 Homo sapiens 0.01290147106465156 QIIGQAK Unmodified 756.44939 0.4493882 600 A0A024R9Z0;O00483 NDUFA4 Cytochrome c oxidase subunit NDUFA4 yes no 0 0 0 1 0 1 41.725 41.725 3 0.023331 10837 20230619_1880_Aki_TMTPro18x_K_F1 79.146 25.983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21385 600 20021 40429 32453 32453 1 9606 Homo sapiens 0.06142148042840745 QIIGRPVVVK Unmodified 1107.7128 0.71281353 3717 P62312 LSM6 U6 snRNA-associated Sm-like protein LSm6 yes yes 0 0 1 5 0 1 44.501 44.58 3 0.0031761 11454 20230619_1885_Aki_TMTPro18x_K_F5 88.392 88.392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21386 3717 20022 40430 32454 32454 1 9606 Homo sapiens 0.16326563427696783 QIILEKEETEELK Unmodified 1600.856 0.85596811 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 1 3.6 1.02 1 1 2 1 53.387 53.425 3;4 4.9293E-06 15564 20230619_1883_Aki_TMTPro18x_K_F4 131.53 87.235 465870 463800 551940 512100 550770 479870 591670 542580 412360 555110 624450 326430 354890 249830 726180 234270 229030 160590 432020 424790 553130 513190 571440 489690 589000 550360 438960 552820 617650 339640 387250 259760 701750 233270 223470 153560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1298100000 21387 150 20023 40431;40432;40433;40434;40435 32455;32456 32456 2 9606 Homo sapiens 0.07957436446963584 QIIQQNPSLLPALLQQIGR Unmodified 2129.2321 0.23207221 3653 P54727;B4DEA3;Q53F10;B7Z4W4;B7ZA74;P54727-2 RAD23B UV excision repair protein RAD23 homolog B yes no 0 0 0 6.5 0.5 1 1 64.553 64.59 3 1.0958E-24 20152 20230619_1886_Aki_TMTPro18x_K_F6 202.18 189.61 83287 69455 101810 107140 74182 101130 96085 100770 108380 119190 117140 133720 136280 114860 120500 147510 130940 151330 77164 63879 101520 104990 79934 102620 96067 103490 110140 119880 120730 134430 137730 120830 123550 147830 125320 143620 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2438800000 21388 3653 20024 40436;40437 32457;32458;32459 32458 3 9606 Homo sapiens 0.21262545348508866 QIIVDPLSFSEER Unmodified 1531.7882 0.7882229 1411 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;H0YBB8 CTNNA1 Catenin alpha-1 yes no 0 0 0 4 0 1 61.974 61.979 2 2.011E-10 19158 20230619_1883_Aki_TMTPro18x_K_F4 178.71 154.33 67599 53178 62283 56758 56797 62328 62976 67034 78075 84401 65158 61420 90989 59395 56568 89723 75416 71109 62451 48731 63590 57152 59629 62739 63628 68579 78275 83657 68523 63351 90306 63019 59349 88530 71946 67753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66873000 21389 1411 20025 40438 32460 32460 1 9606 Homo sapiens 0.0436003130678273 QIIVEEAK Unmodified 928.52295 0.52294707 4013 Q549N0;Q9Y281;Q9Y281-3;F8WDN3 CFL2 Cofilin-2 yes no 0 0 0 3.5 0.5 1 1 47.103 47.164 2 0.0044646 12688 20230619_1883_Aki_TMTPro18x_K_F4 116.37 55.69 93476 86828 98076 98921 101650 94779 111950 95281 98635 112070 116940 97696 120980 88325 140940 110420 108440 104970 86543 79566 99290 98893 105370 96251 111870 97813 102040 111890 119250 99578 124140 92667 141000 110410 104040 99775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103210000 21390 4013 20026 40439;40440 32461 32461 1 9606 Homo sapiens 0.05582651694658125 QILDEAGK Unmodified 872.46035 0.46034682 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9 VCL;HEL114 Vinculin yes no 0 0 0 4 0 1 46.648 46.692 2 0.0093246 12411 20230619_1883_Aki_TMTPro18x_K_F4 108.98 39.554 60604 43651 62244 69806 90505 89229 74216 85528 114980 81849 88760 103040 101100 79640 74204 85520 104450 108100 56009 40188 63549 68556 91325 88654 77025 87491 113710 83620 92890 102790 101510 83285 77656 87075 99668 102420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100050000 21391 51 20027 40441 32462 32462 1 9606 Homo sapiens 0.019015056264720442 QILDPAASVTGSR Unmodified 1313.6939 0.69392858 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 7 0 1 49.214 49.298 2 0.00090554 13261 20230619_1887_Aki_TMTPro18x_K_F7 126.12 57.736 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21392 3588 20028 40442 32463 32463 1 9606 Homo sapiens 0.04962937275308832 QILDSAASLTGSK Unmodified 1289.6827 0.68269519 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 1 0 1 55.769 55.769 3 1.6404E-05 16762 20230619_1880_Aki_TMTPro18x_K_F1 119.17 100.9 47437 40147 43643 43305 34706 39637 43471 40818 44944 45927 54011 45748 58202 45014 47102 54194 50641 55068 43844 36782 44511 43454 37006 40405 43391 41775 46058 46138 55107 46476 58702 46970 48328 54341 48450 52279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210130000 21393 3588 20029 40443 32464 32464 1 9606 Homo sapiens 0.04944115181160669 QILENELQIPVSK Unmodified 1509.8403 0.84025847 2145 A8K9X5;Q9UNN5;Q9UNN5-2 FAF1 FAS-associated factor 1 yes no 0 0 0 7 0 1 60.798 60.841 3 0.00069978 18152 20230619_1887_Aki_TMTPro18x_K_F7 89.359 74.093 69191 55772 63221 67231 57643 68768 65547 64149 75088 72514 72498 73531 78568 65112 79756 85495 70968 79465 63927 51161 64661 66980 60593 69313 65944 66095 75864 72877 74797 74336 80028 68520 80632 85235 68046 75509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 367140000 21394 2145 20030 40444 32465 32465 1 9606 Homo sapiens 0.10573194720541323 QILHGDPLPLTR Unmodified 1358.767 0.76703394 2150 B3KMC2;B3KMD2;A8KAE0;O75717-2;O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes no 0 0 0 8 0 1 47.933 47.991 3 4.2836E-07 12661 20230619_1888_Aki_TMTPro18x_K_F8 154.1 134 35915 31249 36205 34583 33211 38575 36474 35423 46598 42873 37974 32808 45149 31812 33551 45077 41318 38411 33225 28634 36699 34720 34851 38640 36903 36601 46568 42641 39632 33754 45266 33581 34812 44676 39438 36564 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55303000 21395 2150 20031 40445 32466 32466 1 9606 Homo sapiens 0.10200110788582606 QILLYSATFPLSVQK Unmodified 1706.9607 0.96070795 2256 P26196;B2R858 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 0 6 0 1 63.725 63.771 3 7.043E-08 19815 20230619_1886_Aki_TMTPro18x_K_F6 134.88 113.33 172000 144430 154350 168480 147780 175180 180460 174440 195880 165340 148380 122550 137910 104390 153900 154800 149560 115580 158940 132430 158270 168290 155030 176610 180510 178020 196720 166320 153900 125840 141780 110990 155970 152560 142900 110320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 593790000 21396 2256 20032 40446 32467 32467 1 9606 Homo sapiens 0.13550602714144588 QILVGDIGDTVEDPYTSFVK Unmodified 2195.0998 0.099780209 4013 Q549N0;Q9Y281;Q9Y281-3 CFL2 Cofilin-2 yes no 0 0 0 6 0 1 63.675 63.721 3 2.2952E-11 19797 20230619_1886_Aki_TMTPro18x_K_F6 131.54 114.85 55407 42013 53446 56687 51332 65813 61175 58789 64472 78786 72668 76764 76602 70799 71154 92564 82730 102430 51195 38594 54458 56147 53821 65665 61224 61078 65901 78474 74379 77819 77846 74379 73216 93144 79180 97111 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36418000 21397 4013 20033 40447 32468 32468 1 9606 Homo sapiens 0.05003431030399952 QIMENAEINNIIK Unmodified 1528.7919 0.79192807 3433;1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 0 0 6.5 0.5 1 1 58.655 58.72 3 8.0946E-11 17589 20230619_1886_Aki_TMTPro18x_K_F6 172.09 136.36 58851 53322 62549 66559 46319 70398 59518 48357 68428 65865 62980 63585 77991 54452 62552 75199 64546 73238 54483 48909 63033 66157 49902 70350 59523 51454 69005 65594 65526 64350 78305 57626 64061 75082 61798 69550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34572000 21398 1843;3433 20034 40448;40449 32469;32470 32469 2 9606 Homo sapiens 0.04868377809020785 QINDIQLSR Unmodified 1085.5829 0.58292157 1678 Q13347;A0A7I2YQF8;Q5U0F4;Q53HU7;A0A7I2V613;A0A7I2V607;A0A7I2V3N2;A0A7I2V2M3;A0A7I2V640;A0A7I2YQI2;A0A7I2V3U3;A0A7I2V5V8;A0A7I2YQU2;A0A7P0MRT9;A0A7I2V685;A0A7I2YQI6;Q5TFK1;A0A7I2YQC8;A0A7I2YQT9;A0A7I2V4S8;A0A7I2V3K6;A0A7I2YQP9;A0A7I2V4C2 EIF3I Eukaryotic translation initiation factor 3 subunit I yes no 0 0 0 6.5 0.5 1 1 44.523 44.609 2 5.7811E-06 11478 20230619_1886_Aki_TMTPro18x_K_F6 182.4 34.256 340110 275970 310500 323870 325530 390680 351810 332790 414230 426000 435180 406820 468080 355370 357760 503400 491710 424690 314250 253080 318230 324030 338040 388640 355140 346480 419450 425010 446610 412360 471270 376190 373910 498650 468710 404450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 570730000 21399 1678 20035 40450;40451 32471;32472 32471 2 9606 Homo sapiens 0.043553423578941874 QINHIFYR Unmodified 1089.572 0.57196295 743 B4DSD7;E9PFR3;A0A024RD11;Q14738;A8K6Y2;Q14738-2;Q59EF0;H0Y8C4;Q14738-3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes no 0 0 0 3.5 0.5 1 1 42.098 42.151 3 0.0013996 10492 20230619_1883_Aki_TMTPro18x_K_F4 114.93 82.612 81006 44838 72624 67329 67987 75366 71039 69606 86734 79945 85349 82151 84328 72487 80556 93330 77382 84055 74689 41301 74359 66245 71117 75445 71961 71789 87402 80331 87568 83006 85915 76174 81883 92902 74115 79910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68116000 21400 743 20036 40452;40453 32473;32474 32474 2 9606 Homo sapiens 0.030759847742729107 QINLSNIR Unmodified 956.54033 0.54032847 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 0 1.5 0.5 1 1 45.795 45.836 2 0.027374 12510 20230619_1881_Aki_TMTPro18x_K_F2 82.426 40.924 145440 138640 129370 122610 205030 298430 200420 183590 319170 52634 47636 42731 56028 31889 79982 43767 75404 36179 134500 126770 133990 127460 207700 285620 205630 191890 306740 60579 62022 43583 58099 33952 80433 43487 71919 34587 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 416330000 21401 1229 20037 40454;40455 32475 32475 1 9606 Homo sapiens 0.060319920203255606 QINTLNHGEVVCAVTISNPTR Unmodified 2322.175 0.17502761 1886 Q04727-3;Q04727;Q04727-4;Q04727-2;A0A994J7T6;B3KQ29;Q04724;B4DEF9;Q59EF7;H7C4E4 TLE4;TLE1 Transducin-like enhancer protein 4;Transducin-like enhancer protein 1 yes no 0 0 0 1 0 1 48.535 48.535 3 4.5946000000000004E-24 13782 20230619_1880_Aki_TMTPro18x_K_F1 193.64 179.18 18582 19318 22072 21657 17727 19646 25140 19205 23750 28102 28787 25683 28540 20462 22899 29399 27444 34256 17238 17693 22068 21663 18935 20019 24872 19910 24487 27842 29262 26014 28842 21783 23675 29646 26262 32460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26652000 21402 1886 20038 40456 32476 32476 1 9606 Homo sapiens 0.06682710009818038 QINWTVLYR Unmodified 1191.64 0.64004252 1864 C9JXB8;A0A994J4A5;C9JNW5;V9HW01;P83731 RPL24;HEL-S-310 60S ribosomal protein L24 yes no 0 0 0 5 0.816 1 1 1 59.388 59.428 2 0.00033781 17646 20230619_1885_Aki_TMTPro18x_K_F5 159.28 117.7 718840 625710 657450 688420 610840 758710 757360 750410 745490 562210 387830 385300 676950 476460 558110 660090 663910 547770 664490 573320 672600 691290 642720 761610 754650 762120 745990 573290 427590 402780 675740 498700 575930 653780 633400 521890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1143600000 21403 1864 20039 40457;40458;40459 32477 32477 1 9606 Homo sapiens 0.05188809634273639 QIPAITCIQSQWR Unmodified 1599.8191 0.81914587 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;A0A0J9YXZ5;Q6P1N4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 5 0 1 59.142 59.196 3 0.0037251 17565 20230619_1885_Aki_TMTPro18x_K_F5 78.985 63.784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21404 707 20040 40460 32478 32478 1 9606 Homo sapiens 0.04322906140032501 QIPFHDVR Unmodified 1010.5298 0.52976379 1771 A0A8I5KT56;Q06787-6;R9WQY1;A8MQB8;A0A8I5KZ21;G3V0J0;X5D907;Q06787-5;Q06787-4;Q06787-7;Q06787-2;Q06787-8;A0A087WXI3;A0A087WVL8;A0A8I5KS01;X5DQX7;A0A8I5KWH0;W5ZQ92;A0A087WY29;R9WNI0;A0A8I5KTZ9;Q06787-3;Q06787-9;Q06787;A0A0K0MJ24;Q06787-11;Q06787-10;A0A8I5KYA7;R9WPL0;Q8IXW7 FMR1 Fragile X mental retardation protein 1 yes no 0 0 0 7.5 0.5 1 1 39.799 39.826 3 0.0084323 9185 20230619_1887_Aki_TMTPro18x_K_F7 80.219 30.801 67858 49026 63600 69164 73273 70433 68431 73534 91543 69983 81423 81354 78986 67456 67864 84580 79580 75655 62668 45067 65120 68197 75182 71207 70006 74812 91476 71296 83888 81636 80178 70918 69944 84179 76001 71967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71689000 21405 1771 20041 40461;40462 32479 32479 1 9606 Homo sapiens 0.02492009365892045 QIPQATASMK Unmodified 1073.5539 0.55392962 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;A0A286YFA2;A0A286YFL2;A0A286YFM8;A0A286YF78;A0A286YFE1;Q96RV9 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 1 0 1 44.834 44.834 2 7.0699E-06 12213 20230619_1880_Aki_TMTPro18x_K_F1 174.98 109.94 107750 88204 109370 85690 106710 130480 97602 86184 120400 82394 112580 134510 85031 86938 158770 86997 138930 121810 99648 80752 110780 87404 110950 127550 99672 91056 120880 85149 114960 132470 91262 91188 158640 89608 133000 115390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71602000 21406 1334 20042 40463 32480 32480 1 9606 Homo sapiens 0.020094817372410034 QIPQATASMK Oxidation (M) 1089.5488 0.54884425 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;A0A286YFA2;A0A286YFL2;A0A286YFM8;A0A286YF78;A0A286YFE1;Q96RV9 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase yes no 0 1 0 7.5 0.5 1 1 40.016 40.043 3 0.001871 9517 20230619_1888_Aki_TMTPro18x_K_F8 81.923 67.257 200120 153400 202230 201550 268190 264140 233690 226440 273820 200670 247930 277390 208070 187370 269850 194010 265840 228760 184990 140870 206200 200380 272210 261540 238840 233290 275390 206610 254180 274900 216640 196520 272660 197080 254130 217050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 261710000 21407 1334 20042 40464;40465 32481 32481 846 1 9606 Homo sapiens 0.007651778746094351 QIPYTMMK Unmodified 1010.4929 0.49290927 669 Q8NCF7;A0A024RBE8;A0A024RBH9;Q00325-2;Q00325;F8VVM2;Q53HC3;B2RE88 SLC25A3 Phosphate carrier protein, mitochondrial yes no 0 0 0 3 0 1 53.338 53.391 3 0.0030211 15655 20230619_1882_Aki_TMTPro18x_K_F3 98.033 73.878 112210 99335 119030 116280 140020 163760 130840 137660 149980 85207 86680 74276 87088 78993 104380 93950 92298 88659 103860 91065 120660 116670 143600 161350 133040 140980 149010 88741 91905 76184 89748 82104 105110 93916 88402 84278 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36512000 21408 669 20043 40466 32482;32483 32482 2 9606 Homo sapiens -0.011917465665305826 QIQDQLNELEER Unmodified 1513.7372 0.73724996 3122 Q92541;I7GPQ7;H0YKX1 RTF1 RNA polymerase-associated protein RTF1 homolog yes no 0 0 0 1.67 0.471 1 2 52.535 52.551 2 3.049E-07 15591 20230619_1881_Aki_TMTPro18x_K_F2 142.08 95.623 31504 25398 30729 29558 28687 33427 30502 35077 38099 33774 35468 37087 36997 32093 35283 43115 38125 40064 29122 23290 31242 29575 30035 33544 30905 35670 38270 34306 36594 37347 37638 33841 36110 42956 36464 38079 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172560000 21409 3122 20044 40467;40468;40469 32484;32485 32485 2 9606 Homo sapiens 0.000930822619693572 QIQEEITGNTEALSGR Unmodified 1744.8592 0.85915601 2705 E9PS97;B7Z952;Q9NVD7 PARVA Alpha-parvin yes no 0 0 0 3 0 1 50.984 51.055 2 3.8214E-28 14597 20230619_1882_Aki_TMTPro18x_K_F3 208.15 151.79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21410 2705 20045 40470 32486 32486 1 9606 Homo sapiens 0.016520795536735022 QIQQELEQCDVPEDVR Unmodified 1984.916 0.91601896 2287 Q9ULX3;B2RAR2 NOB1 RNA-binding protein NOB1 yes no 0 0 0 1 0 1 51.568 51.568 3 0.0049225 15027 20230619_1880_Aki_TMTPro18x_K_F1 68.576 51.088 9847.7 7563.5 6726.9 11150 9997.9 11871 10478 8785.1 14270 9948.8 10923 9871.9 13614 9925 9034 11029 11192 12000 9078.6 6954.6 7171.1 10960 10160 11873 10641 9228.7 14177 10006 11468 10033 13583 10305 9396.8 11114 10693 11385 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24599000 21411 2287 20046 40471 32487 32487 1 9606 Homo sapiens -0.03704240952151849 QIQQYMK Unmodified 937.46914 0.46913736 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8;B0AZS1 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 0 0 1.5 0.5 1 1 46.565 46.605 2 0.013393 12828 20230619_1881_Aki_TMTPro18x_K_F2 114.02 73.92 170530 134730 144700 145590 184680 208100 168680 168820 266480 112920 119940 100860 112700 97210 136780 124860 122030 105790 157450 123470 149740 146990 188540 204800 173890 173650 259600 117120 129530 102980 116470 101830 137780 124010 116790 100740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113740000 21412 3544 20047 40472;40473 32488;32489 32489 2 9606 Homo sapiens -0.0020984400870247555 QIQSLTCEVDGLR Unmodified 1517.7508 0.75079153 2433 B3KWQ6;P41219;P41219-2;H7C5W5 PRPH Peripherin yes no 0 0 0 4.5 0.5 2 2 54.949 54.989 2;3 4.0234E-57 16210 20230619_1883_Aki_TMTPro18x_K_F4 337.8 283.19 285010 227590 246030 275160 186450 228710 243300 250360 258250 310340 320640 314670 328380 289930 348160 369310 341370 355430 263200 208790 252450 273410 200180 235300 242670 255960 264920 310430 326450 318520 335870 304020 353440 369010 326780 337680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 650440000 21413 2433 20048 40474;40475;40476;40477 32490;32491 32490 2 9606 Homo sapiens 0.012626167695316326 QIQVNDEDVR Unmodified 1214.5891 0.58912916 748 A0A024RD41;Q9ULC3 RAB23 Ras-related protein Rab-23 yes no 0 0 0 1 0 1 39.799 39.799 2 0.00022087 10017 20230619_1880_Aki_TMTPro18x_K_F1 159.34 91.842 20197 15057 20719 21848 23444 28835 26349 25968 34371 27195 26809 31107 37582 26414 25425 26154 42199 45135 18669 13844 21059 21588 24247 28544 26635 26756 34252 27555 28349 31217 37420 27448 26993 27340 40234 42657 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17104000 21414 748 20049 40478 32492 32492 1 9606 Homo sapiens -0.009581842012494235 QISQAYEVLSDAK Unmodified 1450.7304 0.73037367 3532 P31689;P31689-2 DNAJA1 DnaJ homolog subfamily A member 1 yes no 0 0 0 6.5 0.5 1 1 58.578 58.643 2;3 1.0522000000000001E-20 17574 20230619_1886_Aki_TMTPro18x_K_F6 257.19 210 41120 33812 40377 44867 30206 46388 38962 38817 43305 56720 52577 42383 63145 39399 39887 63874 49251 55487 38018 31045 40965 44406 32523 46584 38939 40658 44311 55912 53870 43628 62905 42106 41622 63243 47076 52768 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20721000 21415 3532 20050 40479;40480 32493;32494 32493 2 9606 Homo sapiens 0.023037693813876103 QISRPSAAGINLMIGSTR Oxidation (M) 1886.9996 0.99962943 3811 Q08211;B3KU66;Q08211-2 DHX9 ATP-dependent RNA helicase A yes no 0 1 1 7 0.816 1 1 1 46.689 46.762 3 1.6857E-06 12470 20230619_1886_Aki_TMTPro18x_K_F6 111.08 89.323 165700 144170 152570 168600 186660 179160 190430 180930 198940 185470 200400 182090 195100 165870 182490 198630 192960 193160 153180 132170 156670 168430 191080 180510 192020 184870 202230 187110 205200 184550 198680 173370 186460 198740 184530 183520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 254050000 21416 3811 20051 40481;40482;40483 32495;32496 32495 2494 2 9606 Homo sapiens 0.09160960006238383 QISRPSAAGINLMIGSTR Unmodified 1871.0047 0.0047148075 3811 Q08211;B3KU66;Q08211-2 DHX9 ATP-dependent RNA helicase A yes no 0 0 1 7 0 1 50.406 50.487 3 1.8148E-13 13795 20230619_1887_Aki_TMTPro18x_K_F7 146.64 132.96 211950 185920 203960 211770 188030 216660 211320 226640 214020 254490 249250 195170 251190 170480 208990 202680 226030 172200 196010 170410 207660 211900 197250 218980 211950 231510 219500 253770 253750 200070 253970 178590 214140 201510 215730 164070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 981420000 21417 3811 20051 40484 32497 32497 1 9606 Homo sapiens 0.10405263868847214 QISSLRDEVEAK Unmodified 1373.7151 0.71505795 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;B4DS27 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 1 4.5 0.5 1 1 46.257 46.318 3 0.020816 12175 20230619_1885_Aki_TMTPro18x_K_F5 63.167 47.226 180590 146720 165040 188910 165840 173910 171150 182800 216390 199150 203780 193080 226840 174730 190140 237440 204890 201970 166860 134680 169070 187100 172370 177230 173720 186580 217390 200240 210570 195800 228920 184200 195070 235480 195880 192220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 821670000 21418 2727 20052 40485;40486 32498 32498 1 9606 Homo sapiens 0.04314902584178526 QISTLESVSTSK Unmodified 1278.6667 0.66671078 3335 O94874;O94874-3;O94874-2 UFL1 E3 UFM1-protein ligase 1 yes no 0 0 0 6.5 0.5 1 1 49.448 49.529 3 0.0013714 13367 20230619_1887_Aki_TMTPro18x_K_F7 84.365 67.339 130030 148370 194560 128020 356810 435980 235590 199610 402100 196180 239920 266350 229660 202310 204430 260440 293440 364990 121020 135570 194370 134990 355050 412020 249410 220010 393170 201310 253420 265060 233770 213980 213570 266390 280390 345300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144570000 21419 3335 20053 40487;40488 32499 32499 1 9606 Homo sapiens 0.03852408944271701 QITAQQINK Unmodified 1042.5771 0.57710791 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A8A5YP40;A0A994J773;A0A8A5YP91;A0A8A5YQV3;A0A8A5YNF9;A0A8A5YNG5;A0A994J597 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 8 0 2 42.704 42.706 2;3 0.0012062 10583 20230619_1888_Aki_TMTPro18x_K_F8 83.948 41.612 35074 24114 36481 35178 33867 40271 39308 37671 50444 34466 38010 36325 36193 29901 36491 32567 39568 36337 32410 22180 36899 34678 35566 40254 39656 38585 50202 35094 39495 36577 37013 31206 37247 32911 37807 34485 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22250000 21420 462 20054 40489;40490 32500;32501 32500 2 9606 Homo sapiens 0.057522438462456194 QITLNDLPVGR Unmodified 1224.6826 0.68263561 3838 V9HW63;Q13162;H7C3T4 HEL-S-97n;PRDX4 Peroxiredoxin-4 yes no 0 0 0 4.5 3.5 1 1 54.768 54.802 2;3 1.4464E-08 15585 20230619_1888_Aki_TMTPro18x_K_F8 203.55 165.94 454900 384520 380700 425970 389840 473970 439910 445580 621650 537930 513030 536180 641960 512500 475580 718180 659470 722300 420150 352380 393360 427490 406420 475010 446180 459600 618660 538960 537070 543890 643230 540530 498040 717800 629630 685770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 654120000 21421 3838 20055 40491;40492 32502;32503;32504 32504 3 9606 Homo sapiens 0.07928159971856985 QITQSALLAEAR Unmodified 1299.7147 0.71466402 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 6.5 0.5 1 1 49.312 49.393 2 6.6421E-08 13281 20230619_1887_Aki_TMTPro18x_K_F7 169.33 147.32 248560 211340 226470 255640 227790 273440 253860 246370 270210 226650 229850 191220 230570 194720 252360 253240 231070 197120 229720 193830 232110 254730 237420 274490 254960 253090 272640 229160 237590 196110 236320 203790 255050 250430 221060 187940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 780620000 21422 3758 20056 40493;40494 32505;32506 32506 2 9606 Homo sapiens 0.07679527655000129 QITQVYGFYDECLR Unmodified 1790.8298 0.82977013 1200;374 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;P67775;B3KUN1;A0A8V8TQA1;Q6I9T8;A0A8V8TRB3;B3KQ51;A0A8V8TQU8;P67775-2;E5RHC1;E7ESG8;A0A8V8TRA6;E5RFI3;Q5U086;A0A024R625;P60510;H3BTA2;H3BV22 PPP2CB;PPP2CA;PPP4C Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 4 catalytic subunit no no 0 0 0 6.5 0.5 1 1 60.078 60.132 3 4.4955E-23 17855 20230619_1887_Aki_TMTPro18x_K_F7 198.85 172.06 51647 37967 49268 48716 39347 51755 53546 46787 45629 75123 62071 60290 77933 64939 56513 81575 80766 89941 47708 34862 50107 48357 42077 51974 52940 48908 47741 73915 63582 62039 78026 67758 59322 82089 77106 85304 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 388380000 21423 1200;374 20057 40495;40496 32507 32507 1 9606 Homo sapiens -0.034011559961754756 QITQVYGFYDECLRK Unmodified 1918.9247 0.92473315 1200;374 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;P67775;B3KUN1;A0A8V8TQA1;Q6I9T8;A0A8V8TRB3;B3KQ51;A0A8V8TQU8;P67775-2;E5RHC1;E7ESG8;A0A8V8TRA6;E5RFI3;Q5U086;A0A024R625;P60510;H3BTA2;H3BV22 PPP2CB;PPP2CA;PPP4C Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 4 catalytic subunit no no 0 0 1 2.5 0.5 1 1 56.598 56.625 3 5.9746E-19 17232 20230619_1881_Aki_TMTPro18x_K_F2 208.43 183.27 274460 228380 246870 273110 194150 245220 257220 253910 274670 353660 318390 337490 405210 298130 310240 444400 448590 445500 253600 209450 252470 271810 207830 250270 256360 261520 281040 351420 328480 342090 406120 316830 325510 443810 427850 423140 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 418360000 21424 1200;374 20058 40497;40498 32508;32509 32508 2 9606 Homo sapiens 0.0020277747498766985 QITSYGETCPGLEQYAIK Unmodified 2056.9776 0.97755658 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 7 0.816 1 1 1 57.874 57.93 3 1.6333E-09 16924 20230619_1887_Aki_TMTPro18x_K_F7 129.43 110.39 269250 210040 246170 267850 210260 260820 259680 256740 273300 331590 292860 301450 375800 295610 273880 384240 334720 347960 248720 192800 251600 265650 222820 264120 259490 264600 278850 330100 303160 307230 375940 309910 284260 382340 319760 330830 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1610899999.9999998 21425 3621 20059 40499;40500;40501 32510;32511;32512 32511 3 9606 Homo sapiens -0.00865309252822044 QITVNDLPVGR Unmodified 1210.667 0.66698555 1476;3538 A0A384NPQ2;Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5;V9HW12;P32119;B4DF70 PRDX1;HEL-S-2a;PRDX2 Peroxiredoxin-1;Peroxiredoxin-2 no no 0 0 0 7 0.816 1 1 1 50.54 50.618 2 1.4503E-12 13744 20230619_1888_Aki_TMTPro18x_K_F8 215.06 192.32 4290700 3400500 3684700 4146300 3790900 4551500 3978100 3954200 4392700 4861400 5017100 5135200 5266600 4822000 4995600 5696000 5413500 5892300 3962000 3119800 3798000 4130800 3939000 4557700 4014500 4105800 4479400 4872900 5130400 5190700 5356700 5029300 5111800 5719000 5178900 5592700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 25430000000 21426 1476;3538 20060 40502;40503;40504 32513;32514;32515 32515 3 9606 Homo sapiens 0.0700787345479057 QIVGTPVNSEDSDTR Unmodified 1616.7642 0.76419299 4046 Q5QJE6;J3KP30;B7Z854 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 0 0 0 2.67 0.471 1 2 41.187 41.255 2 4.788900000000001E-25 10386 20230619_1881_Aki_TMTPro18x_K_F2 235.31 210.93 15324 11439 11992 17218 17514 21378 17713 19959 20693 21816 27838 18557 20353 17609 18214 24134 25686 21954 14136 10522 12579 16951 17788 21255 17944 20525 21186 21848 27826 18999 20914 18540 19004 24007 24478 20889 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34281000 21427 4046 20061 40505;40506;40507 32516;32517 32516 2 9606 Homo sapiens -0.01951853917535118 QIVTAGLGDHLAR Unmodified 1349.7415 0.74154747 2975 F5H3Y4;Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 yes no 0 0 0 8 0 1 44.47 44.489 3 3.5539E-11 11282 20230619_1888_Aki_TMTPro18x_K_F8 170.89 125.81 31391 19967 32752 34011 31773 33573 30490 27960 39306 36497 36025 32147 41811 35965 35949 38696 35383 38143 28997 18409 33143 33164 33046 33843 31096 29196 39424 36323 37339 32976 42210 37123 36643 38808 33879 36225 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73425000 21428 2975 20062 40508 32518 32518 1 9606 Homo sapiens 0.0806663626617592 QIWNSPAISVK Unmodified 1241.6768 0.67682195 1610 A0A6M8YHF9;A0A6M8YDW2;A0A6M8YDW1;Q8IUF8-4;Q8IUF8;Q8IUF8-3 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA yes no 0 0 0 3 0 1 56.311 56.348 3 0.030443 16969 20230619_1882_Aki_TMTPro18x_K_F3 53.6 36.127 53738 49462 54563 53694 50192 59993 56759 53456 64156 61740 57688 54048 65587 54744 57093 68371 59651 66066 49735 45307 55292 53984 52695 60047 57084 55291 64702 61741 59814 55268 66280 57182 58411 68325 57094 62751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62639000 21429 1610 20063 40509 32519 32519 1 9606 Homo sapiens 0.065650614601509 QIWQNLGLDDTK Unmodified 1429.7201 0.72014333 1637 P49588;H3BPK7;A0A6Q8PGN5;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62;A0A6Q8PGI8 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 7 0 1 61.453 61.492 3 0.05254 18438 20230619_1887_Aki_TMTPro18x_K_F7 53.947 40.292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21430 1637 20064 40510 32520 32520 1 9606 Homo sapiens 0.022472064467592645 QIWQQYFAAK Unmodified 1281.6506 0.6506072 2162 A8MRA7;I3L448;Q5TC12;H0YEW4;Q5TC12-2;Q5TC12-3 ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1 yes no 0 0 0 4.5 0.5 1 1 61.505 61.531 3 0.00020541 18581 20230619_1885_Aki_TMTPro18x_K_F5 118.18 100.37 95791 80971 86105 91868 85703 103830 97843 108320 110290 104730 100070 93357 108340 88086 107990 108580 105530 100920 88519 74220 88316 92072 89483 104170 98368 110200 111260 105680 103490 95155 110270 92144 109680 108360 100960 95953 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60032000 21431 2162 20065 40511;40512 32521;32522 32522 2 9606 Homo sapiens 0.021047922886964443 QIWTLEQPPDEAGSAAVCLR Unmodified 2240.0896 0.089566649 1426 A0A384MEG1;Q16658 FSCN1 Fascin yes no 0 0 0 6 0 1 61.207 61.262 3 3.3245E-16 18631 20230619_1886_Aki_TMTPro18x_K_F6 157.22 144.91 84973 74260 95689 84887 74957 72093 92766 84994 84405 104250 98677 86843 93881 81653 97221 94339 95802 104780 78687 68065 95921 84761 79818 74231 92296 86482 87120 103750 100310 88785 96124 85106 98712 95193 91738 99379 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 252270000 21432 1426 20066 40513 32523 32523 1 9606 Homo sapiens 0.01912544824199358 QIYIYNEK Unmodified 1069.5444 0.5444108 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2;H3BP95;H3BMX0 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 7 0 1 49.594 49.678 2 0.00025068 13448 20230619_1887_Aki_TMTPro18x_K_F7 184.38 145.07 100080 84407 94369 111010 103710 120710 105420 103580 131270 122110 139370 137880 150740 114210 115090 156870 145690 144520 92516 77484 96584 110000 107140 120910 107010 107530 132570 122930 143040 138530 151710 120880 119580 156140 139090 137400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59680000 21433 4222 20067 40514 32524 32524 1 9606 Homo sapiens 0.0124203672337444 QIYNPPSGK Unmodified 1002.5134 0.51344502 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;Q9BZZ5-5;Q9BZZ5-6;B4DDR3 API5 Apoptosis inhibitor 5 yes no 0 0 0 4.5 3.5 1 1 42.856 42.856 2 0.00051064 11275 20230619_1880_Aki_TMTPro18x_K_F1 133.23 88.788 31683 25411 30852 35361 36759 45472 36813 33772 49803 42631 44906 42763 46971 39904 36535 35588 49996 48812 29287 23346 31533 35000 37779 44926 37501 35554 49791 42650 46362 43288 47389 41056 38069 36579 47697 46226 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48671000 21434 4478 20068 40515;40516 32525;32526 32525 2 9606 Homo sapiens 0.012288834091464196 QIYPPINVLPSLSR Unmodified 1595.9035 0.90352742 1233 A0A140VK65;P21281;B4DFM5;B4DQI9;Q71UA2;B4DWH7;C9JL73;P15313 ATP6V1B2;ATP6B1;ATP6V1B1 V-type proton ATPase subunit B, brain isoform;V-type proton ATPase subunit B, kidney isoform yes no 0 0 0 4.67 0.471 1 2 62.411 62.444 2;3 0.00017587 18945 20230619_1885_Aki_TMTPro18x_K_F5 124.12 67.866 223080 171130 210750 246090 213050 262350 239150 247510 291980 242120 254700 262420 260630 226700 274160 273960 245710 260950 206100 157310 215400 242450 222130 263560 241270 253760 292830 245700 263450 264310 266470 237470 276980 273850 235470 247930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 582260000 21435 1233 20069 40517;40518;40519 32527;32528;32529 32527 3 9606 Homo sapiens 0.1294118022847215 QIYYSDKYDDEEFEYR Unmodified 2161.9116 0.91164509 3686 Q5T179;Q5T178;P61024 CKS1B Cyclin-dependent kinases regulatory subunit;Cyclin-dependent kinases regulatory subunit 1 yes no 0 0 1 3 0.816 1 1 1 52.56 52.599 3 4.2284E-21 15317 20230619_1882_Aki_TMTPro18x_K_F3 218.43 204.42 427410 352770 424780 437690 307970 390920 371980 392440 373530 566640 504860 482030 558690 431150 435720 596010 512480 464660 395210 323660 430040 434500 331200 398840 371870 405470 386630 560340 513890 491510 562330 455210 450350 588490 489260 442900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 343980000 21436 3686 20070 40520;40521;40522 32530;32531;32532;32533 32531 4 9606 Homo sapiens -0.12283426894009608 QKADEEEMLDNLPEAGDSR Oxidation (M) 2161.9434 0.94335592 562 A0A8V8TNE2;A0A024R9A9;Q9NPD8;A0A8V8TN93 UBE2T Ubiquitin-conjugating enzyme E2 T yes no 0 1 1 1 0 1 45.056 45.056 3 0.00021477 12312 20230619_1880_Aki_TMTPro18x_K_F1 77.08 69.458 29420 23305 27416 29876 19260 23172 25630 24917 26792 29967 30792 26730 33133 24575 22777 32287 27067 22790 27183 21393 27908 29545 20840 23979 25527 25485 27401 29908 31466 27229 33222 25833 23632 31766 25827 21762 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36418000 21437 562 20071 40523 32534 32534 330 1 9606 Homo sapiens -0.09113802202409715 QKADEEEMLDNLPEAGDSR Unmodified 2145.9484 0.9484413 562 A0A8V8TNE2;A0A024R9A9;Q9NPD8;A0A8V8TN93 UBE2T Ubiquitin-conjugating enzyme E2 T yes no 0 0 1 2 0.816 1 1 1 50.811 50.863 3 6.1216E-31 14818 20230619_1881_Aki_TMTPro18x_K_F2 222.13 206.87 118100 88140 108240 120290 66939 102430 100170 95776 109740 146280 121240 95838 150340 103730 95500 135100 111920 91136 109070 80981 110250 118570 73945 104710 99434 99687 111920 143560 124890 99900 149730 108490 99192 132700 106780 87104 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132410000 21438 562 20071 40524;40525;40526 32535;32536;32537 32536 3 9606 Homo sapiens -0.07869498339778147 QKFDEIFSATR Unmodified 1340.6725 0.67246486 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7;Q32P42;A8K3I2;E7EN38;A0A494C122;E7ESD9;A0A494BZX5;A0A494C0Y7;C9JNH8 RAD50 DNA repair protein RAD50 yes no 0 0 1 1.5 0.5 1 1 53.325 53.341 3 0.00023124 15703 20230619_1880_Aki_TMTPro18x_K_F1 113.77 91.234 166100 152710 167500 180410 165310 186500 182040 178200 228770 209090 197370 192840 219200 188580 222380 222350 211440 203200 153710 139990 170090 180020 172420 187970 184020 183470 229180 209250 204950 196380 223190 196440 225460 221850 202350 193230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130210000 21439 4309 20072 40527;40528 32538 32538 1 9606 Homo sapiens 0.0157555224659518 QKGDTPASATAGDTLSVPAPAVQPEESLK Unmodified 2864.4403 0.44034624 3954 Q16891-2;B4DS66;C9J406;H7C463;Q3B7X4;B4E2B5 IMMT MICOS complex subunit MIC60 yes no 0 0 1 5.5 0.5 1 1 53.395 53.469 4 1.0189E-29 15400 20230619_1886_Aki_TMTPro18x_K_F6 192.01 169.35 26515 18580 22168 27736 22817 30444 28435 32098 29874 33629 30023 32819 42450 33800 28655 41002 34734 36001 24463 17093 22934 27278 23849 30590 28397 32703 30396 33872 31348 33392 42262 35219 29785 40773 33183 34243 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148250000 21440 3954 20073 40529;40530 32539;32540 32540 2 9606 Homo sapiens 0.08270368103012515 QKLEAQLTENNIVK Unmodified 1626.8941 0.89408495 3236 Q5STK2;O15212;I7HJT1;A2AB88 PFDN6;HKE2 Prefoldin subunit 6 yes no 0 0 1 8 0 1 50.791 50.867 3 0.00082877 13912 20230619_1888_Aki_TMTPro18x_K_F8 87.566 65.725 137830 122520 133870 110110 77702 50666 90238 64635 56372 198190 175920 174250 188840 151320 186930 182280 171250 147800 127490 112070 135240 111640 85133 56346 89411 68776 64710 192130 175470 177050 192070 158490 189220 180800 163840 140830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 330580000 21441 3236 20074 40531 32541 32541 1 9606 Homo sapiens 0.10571367152283528 QKLEDSYR Unmodified 1037.5142 0.5141733 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;B4DGT1;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 5.5 0.5 1 1 36.601 36.68 3 0.011982 8219 20230619_1886_Aki_TMTPro18x_K_F6 78.939 68.229 262780 218670 281460 264510 367250 312330 366440 344610 300520 281080 327430 204830 238120 175950 347000 147500 206450 113620 243150 200580 285490 264130 373600 313180 367460 348060 310840 285050 330210 210650 250620 181090 342040 147520 198250 108620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 189250000 21442 1022;3868 20075 40532;40533 32542 32542 1 9606 Homo sapiens -0.0030832194181584782 QKLEEDAEMK Unmodified 1219.5755 0.57545293 2662 B5BUB5;P05455;Q14730;Q9UMH6 SSB Lupus La protein yes no 0 0 1 3 0.816 1 1 1 44.191 44.258 3 0.00076964 11512 20230619_1882_Aki_TMTPro18x_K_F3 98.407 75.171 709480 509690 639980 655960 788650 862130 797080 763800 928130 832860 979680 938900 969100 710520 802330 940800 1063100 931810 655000 468070 658260 653060 807870 853820 807140 788900 939790 841380 1001800 940920 980910 753060 833890 940800 1013700 885620 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 683580000 21443 2662 20076 40534;40535;40536 32543;32544;32545 32544 3 9606 Homo sapiens -0.02555178024704219 QKLPDGSEIPLPPILLGR Unmodified 1942.1251 0.12514752 2598 Q96KP4;B4DV28;A0A024R382;J3QKT2;J3QL02;A0A087WYZ1;J3KSV5;J3QRD0;J3QKQ0;J3QLU1;J3QR27;J3QQN6;J3KRD5;A0A087WVS2 CNDP2 Cytosolic non-specific dipeptidase yes no 0 0 1 3 0 1 62.782 62.812 3 0.018193 19615 20230619_1882_Aki_TMTPro18x_K_F3 56.53 42.566 26028 27208 29531 26459 22341 25442 27379 26928 33225 38966 37237 36704 42718 32425 35097 37228 34296 38364 24136 24889 29580 26800 23914 25859 27512 27729 33710 38656 38246 37205 43026 33867 35791 37394 32850 36411 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14254000 21444 2598 20077 40537 32546 32546 1 9606 Homo sapiens 0.19176995134148456 QKPCDLPLR Unmodified 1125.5965 0.59646314 3211 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 1 1 0 1 40.884 40.884 3 0.015873 10477 20230619_1880_Aki_TMTPro18x_K_F1 68.657 37.122 207940 159130 170520 159520 174520 199390 216960 209750 229710 208670 225340 223760 231960 207460 200190 262400 261350 228220 191910 145760 176360 161760 182220 198890 216670 213500 233040 211430 231680 226050 235160 217330 207830 260720 249240 217250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198950000 21445 3211 20078 40538 32547 32547 1 9606 Homo sapiens 0.03868876865453785 QKPDGIFQEDGPVIHQEMIGGFR Oxidation (M) 2613.2646 0.2645709 2796 CON__Q2UVX4 yes yes 0 1 1 6 0 1 52.3 52.377 4 5.9655E-08 14957 20230619_1886_Aki_TMTPro18x_K_F6 110.83 98.878 + 27899 26587 29012 28566 60344 70243 54603 48653 76058 37234 46754 54740 49538 44955 54381 36258 36454 51195 25833 24348 29869 29221 60105 67354 55966 50869 74972 38879 49539 54407 50706 46232 54127 37480 35154 48413 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63347000 21446 2796 20079 40539 32548 32548 1670 1 0.02246919898516353 QKPITPETAEK Unmodified 1240.6663 0.66631685 614 A0A024RAA5;P60953;B4E1U9;P60953-1;A0A8Q3WLC5;B7ZAY4;B4DMH5;A0A024R9T1;A0A024RAE6;A0A590UJK8;A0A8Q3SI43 CDC42;hCG_39634 Cell division control protein 42 homolog yes no 0 0 1 6.5 0.5 1 1 40.068 40.146 3 5.4712E-05 9264 20230619_1887_Aki_TMTPro18x_K_F7 134.21 86.163 123430 78065 99966 116580 130220 138440 127300 129760 160000 134700 162570 168690 164280 130710 142430 104870 158090 139120 113790 71853 104050 114790 132860 138100 129520 133300 161160 136930 166760 168290 166500 134790 145860 107880 150980 131850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1020799999.9999999 21447 614 20080 40540;40541 32549 32549 1 9606 Homo sapiens 0.05561034015090627 QKPVQTFTEEK Unmodified 1333.6878 0.68778057 4034 Q5HYL6;Q9NYL9 DKFZp686E1899;TMOD3 Tropomodulin-3 yes no 0 0 1 7 0 1 43.183 43.262 3 0.0003693 10636 20230619_1887_Aki_TMTPro18x_K_F7 105.03 83.004 28854 23463 24542 30062 40528 38563 35433 39697 40686 36463 48946 50622 45479 33241 40678 46685 52107 46120 26647 21535 25558 29922 40662 38385 36188 40373 41457 37440 49683 50175 46268 35582 42110 46648 49704 43833 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83388000 21448 4034 20081 40542 32550 32550 1 9606 Homo sapiens 0.03428419043802933 QKVDLQSLPTR Unmodified 1283.7197 0.7197494 4479 Q9C005;B4DIS3 DPY30;LOC84661 Protein dpy-30 homolog yes no 0 0 1 1.5 0.5 1 1 44.084 44.125 3 0.00041834 11713 20230619_1881_Aki_TMTPro18x_K_F2 89.629 72.244 373770 316900 375480 407180 429110 457580 437400 410880 381750 417510 456760 328120 343760 251960 462920 252310 263310 157430 345710 290830 382280 404380 441330 457840 438910 423210 395140 418720 459570 334690 359470 262530 456420 249060 253130 150920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 525800000 21449 4479 20082 40543;40544 32551 32551 1 9606 Homo sapiens 0.08923831517586223 QKVEHIEWFR Unmodified 1370.7095 0.70951906 4303 Q92665 MRPS31 28S ribosomal protein S31, mitochondrial yes yes 0 0 1 8 0 1 45.764 45.803 4 0.0047608 11813 20230619_1888_Aki_TMTPro18x_K_F8 85.813 73.252 19080 16408 18021 21134 19635 20914 23746 21187 26792 18624 19656 22024 21851 19278 22571 20129 19930 18729 17640 15058 18440 20948 20374 21172 23783 21572 26811 19079 20623 22105 22270 20012 22779 20149 19086 17808 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16531000 21450 4303 20083 40545 32552 32552 1 9606 Homo sapiens 0.03899268583018056 QLAASAGFR Unmodified 919.48756 0.48756462 2358 B3KNM8;B4E2X3;C4B4C6;B3KNI0;Q8N6R0-1;Q8N6R0-3;Q8N6R0-4;Q8N6R0 feat;METTL13 Methyltransferase-like protein 13 yes no 0 0 0 2 0 1 42.236 42.316 2 0.071555 10905 20230619_1881_Aki_TMTPro18x_K_F2 74.165 62.26 77724 65532 77423 78203 91675 121630 84541 83635 117660 62584 69179 63817 59948 56256 82425 58471 79847 67497 71881 60097 78915 78478 94131 118760 86645 87490 115870 64569 72859 64500 62608 58390 83138 59311 76336 64059 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24112000 21451 2358 20084 40546 32553 32553 1 9606 Homo sapiens 0.0246003395752723 QLADETLLK Unmodified 1029.5706 0.57062555 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98 LMNB1 Lamin-B1 yes no 0 0 0 4.5 0.5 2 2 53.183 53.229 2;3 0.00063735 15448 20230619_1883_Aki_TMTPro18x_K_F4 108.15 60.949 517180 417260 464010 490740 469860 571320 418240 417240 499060 584240 635410 685780 675340 566110 571660 719040 699940 704890 477770 382660 475970 490550 486920 568080 427560 441510 509770 584570 647490 687460 683050 595920 591020 718890 668490 669640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1235200000 21452 3482 20085 40547;40548;40549;40550 32554;32555 32554 2 9606 Homo sapiens 0.057023058948516336 QLAEDFLK Unmodified 962.5073 0.50729701 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3KRZ1;J3QSF1 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 5.2 0.748 1 2 2 57.535 57.587 2;3 0.0015562 16879 20230619_1885_Aki_TMTPro18x_K_F5 149.94 105.49 532610 451320 504480 573220 490770 610780 560020 561810 654390 643880 587990 533340 705260 492920 520240 733130 622320 575590 492380 414140 515100 569240 513420 613460 563610 579510 658990 643050 610970 545520 706650 522860 539070 723400 594120 548540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1202600000 21453 3137 20086 40551;40552;40553;40554;40555 32556;32557;32558 32557 3 9606 Homo sapiens 0.024543651776298248 QLAEDFLR Unmodified 990.51345 0.51344502 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 4.5 0.5 1 1 54.505 54.546 2 0.00080224 16007 20230619_1883_Aki_TMTPro18x_K_F4 155.75 90.951 569090 500530 554970 537300 519160 597300 558570 583620 648200 633290 638340 677470 678770 553540 615070 733340 663520 716940 526360 458500 564280 540720 543470 599280 563960 598430 655020 638650 657430 681570 688320 584640 629930 732780 634750 680930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1083400000 21454 1328 20087 40556;40557 32559 32559 1 9606 Homo sapiens 0.017808834091511017 QLAEEDLAQQR Unmodified 1299.6419 0.64189301 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 0 2 0 1 42.183 42.262 2 4.9319E-07 10856 20230619_1881_Aki_TMTPro18x_K_F2 143.24 107.28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21455 3921 20088 40558 32560 32560 1 9606 Homo sapiens 0.004057738615529161 QLAEFAR Unmodified 833.43955 0.43955179 3502 P25490;A0A994J726;H0YJU4;H0YJV7;Q96MM3;A0A494C032 YY1;ZFP42 Transcriptional repressor protein YY1;Zinc finger protein 42 homolog yes no 0 0 0 6 0 1 44.137 44.229 2 0.026213 11334 20230619_1886_Aki_TMTPro18x_K_F6 87.435 45.933 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21456 3502 20089 40559 32561 32561 1 9606 Homo sapiens 0.016169600374723814 QLAGRPEPLR Unmodified 1135.6462 0.64619053 485 A0A024R816;Q9C0H2-2;Q9C0H2;Q9C0H2-4 TTYH3 Protein tweety homolog;Protein tweety homolog 3 yes no 0 0 1 1 0 1 34.735 34.735 3 0.039271 7879 20230619_1880_Aki_TMTPro18x_K_F1 66.92 38.746 44249 33959 45489 37041 37646 36564 37703 38724 40596 42335 42469 37688 42325 29348 36149 37528 40856 28144 40910 31128 45921 37190 39684 37090 38142 39505 41289 42435 43441 38194 42862 31000 37130 37060 38957 26877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26289000 21457 485 20090 40560 32562 32562 1 9606 Homo sapiens 0.08379327865782216 QLALDHFK Unmodified 970.52362 0.52361577 4099 Q6DD88;F5H6I7;B4DXC4 ATL3 Atlastin-3 yes no 0 0 0 8 0 1 47.592 47.651 3 0.0010505 12529 20230619_1888_Aki_TMTPro18x_K_F8 109.29 72.956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21458 4099 20091 40561 32563 32563 1 9606 Homo sapiens 0.0371749113437545 QLALEDAK Unmodified 886.476 0.47599688 4130 Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A8I5KSP1 LARP1 La-related protein 1 yes no 0 0 0 4 0 1 47.043 47.086 3 0.0028514 12661 20230619_1883_Aki_TMTPro18x_K_F4 99.802 51.519 67345 79133 87439 80126 79121 78271 77547 78781 91185 79673 74706 70762 78181 60643 72463 81762 91292 83512 62596 72389 86961 80888 82688 79377 78748 80479 91471 80217 77552 71922 79402 64051 74871 81889 87112 79330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74845000 21459 4130 20092 40562 32564 32564 1 9606 Homo sapiens 0.028217921435157223 QLALWNPK Unmodified 968.54435 0.54435122 676 Q9ULV4-3;Q9ULV4-2;Q9ULV4;Q59EA2;A0A024RBI5;B3KN06;Q53G58;B4DMH3;B4E3S0;B7Z9V0 CORO1C Coronin-1C;Coronin yes no 0 0 0 3.5 0.5 1 1 56.503 56.524 3 0.0031138 16880 20230619_1883_Aki_TMTPro18x_K_F4 92.47 66.425 117340 102150 113870 119570 114780 124870 129970 130500 151740 139250 133320 135350 144990 126330 153290 159670 145320 137530 108520 93648 116010 119430 119570 126020 130840 133160 152620 140160 138230 137310 148030 132330 155330 158670 139060 130890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 222840000 21460 676 20093 40563;40564 32565;32566 32566 2 9606 Homo sapiens 0.05882081514039328 QLANQTVGR Unmodified 985.53049 0.53049207 4095 Q68EM7;Q68EM7-5;Q68EM7-6;A0A2X0SF71;Q68EM7-2;B4DWE9;A0A2X0U4K4;E7ERK8;F5H6L3;I3L4P0;J3KRS3;Q68EM7-4;Q17R89-2;Q17R89-3;Q17R89;I3L1S9 ARHGAP17;ARHGAP44 Rho GTPase-activating protein 17;Rho GTPase-activating protein 44 yes no 0 0 0 7.5 0.5 1 1 34.239 34.276 2 0.0003105 7189 20230619_1888_Aki_TMTPro18x_K_F8 140.35 82.794 36376 24683 50600 46835 67211 70742 45318 54787 55797 40549 67479 79487 59681 51782 67414 31734 78357 73403 33708 22786 50429 45748 67866 69317 47346 56675 56646 42941 68439 77903 61533 53297 68811 34665 74832 69295 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32358000 21461 4095 20094 40565;40566 32567;32568 32568 2 9606 Homo sapiens 0.03714804014964557 QLAPIWDK Unmodified 969.52837 0.5283668 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;Q96C96;B3KTQ9 P4HB Protein disulfide-isomerase yes no 0 0 0 4.5 3.04 1 1 1 1 56.7 56.733 2;3 0.0014032 16436 20230619_1888_Aki_TMTPro18x_K_F8 114.89 97.954 338600 280440 344390 317460 317410 389490 374010 336320 424280 382080 373260 353310 393600 322480 395720 413730 401400 406130 313160 257080 348860 318640 333670 387150 375340 348540 427300 382980 386210 359060 401110 338590 402770 413820 384030 385810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 572950000 21462 537 20095 40567;40568;40569;40570 32569;32570 32570 2 9606 Homo sapiens 0.0423837527713431 QLAPLLPSLAPSSAR Unmodified 1519.8722 0.8722273 756 A0A087WUK2;A0A024RDB5;O14979 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like yes no 0 0 0 5 0 1 60.883 60.933 3 0.00077017 18255 20230619_1885_Aki_TMTPro18x_K_F5 79.394 66.834 21422 13461 15564 20245 17913 15881 18734 20201 20237 19222 16505 16149 18758 13434 18782 19416 18343 20418 19735 12392 16356 19822 18427 16493 18890 20313 20393 19378 17212 16445 19058 14282 19078 19467 17569 19375 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87411000 21463 756 20096 40571 32571 32571 1 9606 Homo sapiens 0.1330860719440352 QLAQTGSLGR Unmodified 1029.5567 0.55670682 1385 A0A2X0SFX7;Q9Y3L3;F8WEQ3;B7Z6Y3;Q9Y3L3-2 SH3BP1 SH3 domain-binding protein 1 yes no 0 0 0 8 0 1 38.328 38.313 2 0.0087441 8809 20230619_1888_Aki_TMTPro18x_K_F8 94.309 55.347 18377 14250 19099 19449 23002 21229 22822 27653 30010 22784 24904 23952 23202 22316 26321 18933 30696 24172 16993 13091 19398 19244 23554 21483 23250 27655 29939 23327 25718 24203 23908 22892 26906 19401 29282 22927 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11425000 21464 1385 20097 40572 32572 32572 1 9606 Homo sapiens 0.04311073186431713 QLASEDISHITPTQGFNIK Unmodified 2098.0695 0.069483134 3553 P36405 ARL3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 7 0 1 56.255 56.313 3 3.1291E-05 16280 20230619_1887_Aki_TMTPro18x_K_F7 92.096 81.462 29654 27010 29649 29817 25574 24180 24735 27221 25316 30520 30135 25126 29084 23277 28652 32276 30614 32177 27439 24745 30046 29827 26830 24974 25041 27689 25980 30487 30616 25714 29686 24562 29273 32271 29283 30557 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105340000 21465 3553 20098 40573 32573 32573 1 9606 Homo sapiens 0.06437117155837768 QLASGLLLVTGPLVLNR Unmodified 1763.0669 0.066904359 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 RPL6 60S ribosomal protein L6 yes no 0 0 0 8 0 1 64.879 64.898 3 5.6753000000000006E-30 19876 20230619_1888_Aki_TMTPro18x_K_F8 223.15 205.57 34497 21997 32169 35093 29266 38416 42493 40815 47877 36355 30425 33761 45258 34874 26359 48492 45562 47018 31837 20262 32863 34393 31036 38610 42222 41412 47758 36927 32691 34452 44828 36678 28318 48355 43417 44668 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227320000 21466 680 20099 40574 32574 32574 1 9606 Homo sapiens 0.2158935827951609 QLASVILK Unmodified 870.55385 0.55385327 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 3 0 1 56.016 56.053 3 0.0029685 16824 20230619_1882_Aki_TMTPro18x_K_F3 98.582 79.222 86771 70526 75659 85028 80665 91865 83814 69394 87427 85312 94057 82618 90919 65193 82609 88254 86938 80222 80146 64693 77912 84745 83520 91872 84426 72940 89124 85308 95974 83444 92406 69090 84417 87854 83093 76305 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79625000 21467 4386 20100 40575 32575 32575 1 9606 Homo sapiens 0.11339849799571766 QLAVYEEFAR Unmodified 1224.6139 0.61388734 1957 A5YKK6;A5YKK6-2;A5YKK6-3;B4DYL7 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 4 0 1 55.613 55.622 2 0.020925 16481 20230619_1883_Aki_TMTPro18x_K_F4 88.056 68.959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21468 1957 20101 40576 32576 32576 1 9606 Homo sapiens 0.010564956721282215 QLCDNAGFDATNILNK Unmodified 1792.8414 0.84139745 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 7 1 1 1 60.138 60.187 3 0.00022533 17859 20230619_1888_Aki_TMTPro18x_K_F8 92.773 82.576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21469 4005 20102 40577;40578 32577;32578 32578 2 9606 Homo sapiens -0.023309589728341962 QLCEDWEVVPEPVAR Unmodified 1825.8669 0.86688392 2847 D6RCP9;F5CTF3;D6RFG8;P27707 DCK Deoxycytidine kinase yes no 0 0 0 2.5 0.5 1 1 59.129 59.15 3 1.6683E-10 18069 20230619_1882_Aki_TMTPro18x_K_F3 149.3 122.2 25753 20233 23405 22037 24872 29594 24774 26765 32188 25652 27433 25951 29288 22382 25692 27660 28725 30152 23789 18545 23986 22217 25752 29287 25220 27496 32166 26007 28437 26222 29649 23502 26367 27844 27465 28607 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44073000 21470 2847 20103 40579;40580 32579 32579 1 9606 Homo sapiens -0.013014844504141365 QLCGGSQAAIER Unmodified 1288.6194 0.61938343 67 A0A024R014;A0A024QZW3;Q96S59;Q96S59-2;Q96S59-3 RANBP9 Ran-binding protein 9 yes no 0 0 0 5 0 1 37.648 37.74 2 3.3956E-12 8586 20230619_1885_Aki_TMTPro18x_K_F5 176.18 142.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21471 67 20104 40581 32580 32580 1 9606 Homo sapiens -0.013381488077357062 QLDDEEVSEFALDGLK Unmodified 1806.8523 0.85233929 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 2.5 0.5 1 1 62.835 62.855 3 2.7667E-06 19634 20230619_1882_Aki_TMTPro18x_K_F3 116.35 104.66 24811 23517 30153 29986 28854 29521 32616 27005 33176 33163 34801 36977 36346 25359 34372 31858 42931 39538 23006 21573 30164 29746 30133 29839 32683 27954 33837 33296 35717 36951 36922 26923 35441 32346 40970 37484 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 273250000 21472 2863 20105 40582;40583 32581 32581 1 9606 Homo sapiens -0.018812781175938653 QLDEPKLER Unmodified 1126.5982 0.59823728 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;F8VX11;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 1 3.5 0.5 1 1 40.323 40.373 3 0.064698 9785 20230619_1882_Aki_TMTPro18x_K_F3 48.073 21.954 341700 261730 416720 364760 578310 583040 471660 501430 467100 270470 310350 211340 234130 158850 340910 200610 200300 169540 316410 240510 419130 362730 584300 571060 481660 511400 469350 284210 322050 215910 246060 167990 336240 199670 192790 161480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 180930000 21473 2578 20106 40584;40585 32582 32582 1 9606 Homo sapiens 0.04000209155083212 QLDFNSSK Unmodified 937.45051 0.45051041 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITV3;A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 6.5 0.5 1 1 46.201 46.286 2 0.0044874 11888 20230619_1887_Aki_TMTPro18x_K_F7 116.3 52.739 69141 49340 65258 71941 78353 77061 76494 76600 98839 81089 90884 100910 97291 80273 76446 93407 101990 97112 63852 45376 66839 70837 80269 77528 77917 78420 99064 82341 93940 100810 98112 84178 79602 93818 97307 92216 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168380000 21474 3647 20107 40586;40587 32583 32583 1 9606 Homo sapiens -0.020716823788916372 QLDMELVSVK Unmodified 1160.6111 0.61111015 4677 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 0 0 6 0 1 58.841 58.906 3 0.0076228 17675 20230619_1886_Aki_TMTPro18x_K_F6 61.435 49.199 42236 31299 37866 36018 28825 39063 40281 33700 44471 44390 45394 41351 43812 35122 38215 43735 43843 46234 38998 28708 38691 36039 31032 39139 40078 35106 45098 44205 46429 41911 44487 36911 39301 43934 41911 43878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20169000 21475 4677 20108 40588 32584 32584 1 9606 Homo sapiens 0.03722904222968282 QLDMILDEQRR Unmodified 1415.7191 0.71909747 193 Q53FS4;B2R774;A0A024R2A7;P49257 LMAN1 Protein ERGIC-53 yes no 0 0 1 4 0 1 49.883 49.918 3 0.0093321 13944 20230619_1883_Aki_TMTPro18x_K_F4 61.235 33.826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21476 193 20109 40589 32585 32585 1 9606 Homo sapiens 0.02786668806243142 QLDMQSSWVYETGR Unmodified 1698.7672 0.76716988 3006 Q6PJT7;Q6PJT7-5;G3V256;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-10;Q6PJT7-11;Q6PJT7-4;A0A3B3IT62;H0YJA2;A0A024R6F2;G3V5I6 ZC3H14;FLJ11806 Zinc finger CCCH domain-containing protein 14 yes no 0 0 0 6 0 1 55.998 56.073 2 0.006899 16489 20230619_1886_Aki_TMTPro18x_K_F6 72.321 58.164 17721 13319 15697 15936 16866 18705 20506 18693 16891 20360 16979 19932 23206 19041 19533 20433 21283 23285 16363 12220 16136 15919 17515 18705 20350 19143 17446 20466 17715 20209 23308 19755 20028 20669 20361 22079 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12233000 21477 3006 20110 40590 32586 32586 1 9606 Homo sapiens -0.054263020643702475 QLDNPAR Unmodified 812.41407 0.41406533 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 4 0 1 32.365 32.425 2 0.060878 6491 20230619_1883_Aki_TMTPro18x_K_F4 75.213 41.662 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21478 1213 20111 40591 32587 32587 1 9606 Homo sapiens 0.0003548551504763964 QLDWRPER Unmodified 1098.557 0.55704117 2579 B4DRS4;O43719 HTATSF1 HIV Tat-specific factor 1 yes no 0 0 1 6 0 1 40.728 40.82 3 0.017345 9855 20230619_1886_Aki_TMTPro18x_K_F6 71.708 32.403 111300 91680 105600 117650 120510 147110 136220 121400 169220 130930 150800 140470 163930 124970 148000 156790 153420 158190 102870 84146 108080 117020 124580 145880 137380 126090 169650 132220 156090 141740 166040 131170 151130 157100 146770 150220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86533000 21479 2579 20112 40592 32588 32588 1 9606 Homo sapiens 0.011704929062716474 QLEAIDQLHLEYAK Unmodified 1669.8675 0.86753585 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3 ACTN4 Alpha-actinin-4 yes no 0 0 0 5.5 0.5 1 1 57.15 57.208 3 2.3155E-05 16767 20230619_1885_Aki_TMTPro18x_K_F5 111.64 85.519 56697 46523 53742 57033 40085 55041 52417 54225 54803 53666 61037 64651 64644 50331 62629 69143 62271 66118 52404 42680 54663 56714 43136 55766 52249 55456 55930 54588 62524 64669 65728 53391 63740 68991 59610 62817 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22720000 21480 1069 20113 40593;40594 32589;32590 32589 2 9606 Homo sapiens 0.059396782609610455 QLEAIVR Unmodified 827.4865 0.48650199 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 6 0 1 44.957 45.046 2 0.056445 11700 20230619_1886_Aki_TMTPro18x_K_F6 83.313 27.191 292660 223420 259180 247580 297270 321640 314490 296820 343960 338890 341710 317520 320340 283730 303620 372100 369290 317700 270250 204830 266580 249130 306260 319130 316970 306020 348700 339620 349610 322320 326980 298340 313030 369290 352340 302520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 808780000 21481 2188 20114 40595 32591 32591 1 9606 Homo sapiens 0.06585819588610775 QLEALMAEHQR Unmodified 1324.6558 0.65576893 1588 Q15154;Q15154-5;H0YBA1;D3DSQ0;A0A5H1ZRS1;B9EIS5;A2RUU9;Q15154-2;Q15154-4;A0A4W8VX11 PCM1 Pericentriolar material 1 protein yes no 0 0 0 5 0 1 46.092 46.169 3 5.3299E-05 12106 20230619_1885_Aki_TMTPro18x_K_F5 116.81 72.042 32694 32153 34081 33668 38726 41611 33751 36194 51506 38665 33018 39464 46243 35845 37343 48740 47996 45984 30280 29436 34566 33997 39747 41368 34867 37406 50730 39005 35361 39901 46353 37789 38778 48581 45805 43712 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66356000 21482 1588 20115 40596 32592 32592 1 9606 Homo sapiens 0.006427280889965914 QLEDELVSLQK Unmodified 1300.6874 0.68744622 2862 P09493-3;D9YZV5;P09493-4;P09493-10;A0A0K0K1I0;P09493-9;P09493;D9YZV4;A0A0S2Z4G6;C9IZA2;H0YKP3;A0A087WTJ7 TPM1 Tropomyosin alpha-1 chain yes no 0 0 0 3.5 0.5 1 1 59.845 59.861 3 7.843E-08 18228 20230619_1883_Aki_TMTPro18x_K_F4 143.97 111.97 79362 69615 83491 97962 189730 264620 211020 220470 279270 154810 131850 143580 169280 130960 144810 163220 156900 167630 73449 63944 86334 98679 189750 253630 213310 226240 274450 159920 143930 145880 170420 137310 148450 163700 150080 159130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 370000000 21483 2862 20116 40597;40598 32593;32594 32594 2 9606 Homo sapiens 0.049129993239375835 QLEDGRTLSDYNIQK Unmodified 1778.8799 0.87989145 1332;3737 Q5RKT7;A0A248RGE3;P62979;B2RDW1;Q8WYN9;Q96H31;Q5U5U6;Q9UFQ0;Q96C32;Q96MH4;L8B196;F5H747;J3QKN0;L8B4R0;A8K674;L8B4J3;L8B4Z6;L8B4M0;Q66K58;F5GXK7;Q5PY61;P0CG48;L8B4I8;B4DV12;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H265;F5H2Z3;Q5UGI3;F5H388;Q59EM9;P0CG47;M0R1M6;Q49A90;M0R1V7;P62987;Q3MIH3;M0R2S1 RPS27A;HEL112;UBC;UBB;DKFZp434K0435;UbC;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 no no 0 0 1 5.5 0.5 1 1 48.15 48.228 3 0.0056538 13130 20230619_1886_Aki_TMTPro18x_K_F6 69.94 34.637 84716 96564 104690 82353 152420 242310 135100 127670 194890 124760 120590 148630 140110 129050 122930 160960 174280 321170 78680 88227 105380 86436 154730 230090 138950 138150 192060 127250 128250 149100 141740 135700 128400 169970 167270 302810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169380000 21484 1332;3737 20117 40599;40600 32595 32595 1 9606 Homo sapiens 0.02160669933346071 QLEEEQAVRPK Unmodified 1325.6939 0.69392858 2911 E9PC90;H1UBN2;P14635-2;P14635 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 yes no 0 0 1 3 0 1 38.734 38.788 3 0.00031348 9101 20230619_1882_Aki_TMTPro18x_K_F3 108.56 92.977 34451 29390 33608 37122 35931 45083 39804 40081 49051 46902 49614 42818 50384 41051 39877 52180 43335 41655 31858 26967 34275 36950 37299 44853 40196 41466 49465 46926 50849 43630 50883 42987 40995 51637 41418 39682 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35349000 21485 2911 20118 40601 32596 32596 1 9606 Homo sapiens 0.044109372753155185 QLEEQLR Unmodified 914.48214 0.48214489 3083;2862 P09493-3;D9YZV5;P09493-4;Q15657;P09493-10;A0A0K0K1I0;P09493-8;Q8TCG4;H0YKX5;H0YL42;H7BYY1;B7Z596;F5H7S3;Q1ZYL5;P09493-2 TPM1 Tropomyosin alpha-1 chain no no 0 0 0 2.5 0.5 1 1 39.704 39.767 2 0.0024616 9495 20230619_1882_Aki_TMTPro18x_K_F3 161.6 45.49 208720 172160 202180 251430 553640 657690 500810 500600 770990 384710 365910 399540 460060 348290 359640 437850 453850 418550 192950 158240 211780 252360 546680 630180 515420 518610 753000 396450 398680 403290 461800 365870 373070 437260 433090 397870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 345700000 21486 2862;3083 20119 40602;40603 32597;32598 32598 2 9606 Homo sapiens 0.02148310375048368 QLEEQNAR Unmodified 986.47812 0.47812214 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;Q59F36 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 0 0 1 0 1 30.549 30.549 2 0.0094656 6204 20230619_1880_Aki_TMTPro18x_K_F1 99.802 70.715 6756.3 3921.8 11948 12069 17155 18025 11021 13309 12027 7519.5 19060 19431 12215 12915 14867 4299.4 17456 15804 6275.8 3657.7 11781 11575 17222 17649 11516 13767 12441 8276.7 18929 18952 12823 13078 15153 5140.4 16665 14895 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5243300 21487 1717 20120 40604 32599 32599 1 9606 Homo sapiens -0.015657791186754366 QLEESQDSLSEELAK Unmodified 1704.8054 0.8053891 1036 O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;A0A7I2V581;Q57Z91;O60282-2;A0A7I2V352;A0A7I2YQQ7;A0A7I2V3V4;Q3LIE3 KIF5C;Nbla04137 Kinesin heavy chain isoform 5C;Kinesin-like protein yes no 0 0 0 2 0 1 54.225 54.249 3 0.0010036 16297 20230619_1881_Aki_TMTPro18x_K_F2 73.834 57.944 26952 22245 22848 24929 24415 36372 25929 21400 33378 34954 28949 27909 34389 31654 28407 43799 34112 31110 24892 20390 23598 25094 25376 35551 26273 23264 33437 34415 30136 28797 34667 33146 29392 43065 32562 29694 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135980000 21488 1036 20121 40605 32600 32600 1 9606 Homo sapiens -0.01882137668667383 QLELENLTTQETR Unmodified 1573.7948 0.79476484 2028 P18031;A8K3M3;B4DSN5 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type yes no 0 0 0 2 0 1 52.225 52.264 3 0.05863 15454 20230619_1881_Aki_TMTPro18x_K_F2 42.958 29.977 81401 72631 68169 80870 65760 93893 77784 106840 67338 91654 95767 95639 97631 88972 84471 104280 84001 92761 75211 66551 70415 81192 68984 94200 77524 107730 70421 93463 97001 96726 98972 92757 86218 103860 80436 88195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56034000 21489 2028 20122 40606 32601 32601 1 9606 Homo sapiens 0.03081924467483077 QLEMILNKPGLK Oxidation (M) 1398.7905 0.7904715 3794;3964 Q04828;H0Y804;A6NHU4;P17516;Q2XPP3;S4R3Z2;A0A0A0MSS8;P42330;P42330-2 AKR1C1;AKR1C4;AKR1C3 Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C3 no no 0 1 1 3 0 1 55.484 55.525 4 0.0017084 16594 20230619_1882_Aki_TMTPro18x_K_F3 95.417 75.321 21448 15538 19869 29563 61176 53459 89570 82716 96911 27731 44183 38047 33470 31952 39239 31918 30260 35681 19806 14340 21043 29010 60897 52887 88709 80969 95904 31374 47323 38030 34810 33139 39267 32315 29077 33830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196490000 21490 3794;3964 20123 40607 32602 32602 2477 1 9606 Homo sapiens 0.10702788510911887 QLEPVYNSLAK Unmodified 1260.6714 0.67140222 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 7.5 0.5 1 1 53.321 53.392 3 2.7881E-06 14976 20230619_1888_Aki_TMTPro18x_K_F8 122.18 107.92 206980 196940 215310 205630 236680 247150 269850 257140 271200 283500 278670 290930 312060 229150 258200 311340 307740 313690 191650 180310 218320 207660 244830 247130 270180 262670 276660 285230 287100 292900 314650 242930 266530 311500 294000 297900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1031699999.9999999 21491 909 20124 40608;40609 32603;32604 32604 2 9606 Homo sapiens 0.0514933787769678 QLEQRLR Unmodified 941.54066 0.54066282 4149 Q7L099-4;Q7L099-3 RUFY3 Protein RUFY3 yes no 0 0 1 7.5 0.5 1 1 32.335 32.384 3 0.0069693 6496 20230619_1888_Aki_TMTPro18x_K_F8 107.59 0 89234 75218 80778 79039 99760 96257 92326 91709 113730 89429 105470 102910 95185 84999 100750 89231 118870 102530 82463 68900 83014 79783 101860 95994 94180 93939 114240 90957 108150 103250 97790 88487 103280 90393 113440 97302 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30522000 21492 4149 20125 40610;40611 32605 32605 1 9606 Homo sapiens 0.06755411740186901 QLESLRR Unmodified 900.51411 0.51411372 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3;Q9BTE3-3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 1 4.5 3.5 1 1 33.131 33.131 3 0.0023479 6748 20230619_1888_Aki_TMTPro18x_K_F8 118.05 35.746 136100 108600 123460 122570 144710 136800 141490 144670 167960 146330 180150 155840 164010 137870 151970 164060 182810 140610 125730 99562 126750 122890 148420 137520 143700 147270 169990 148120 183380 157300 167340 144150 156500 163130 174320 133960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54659000 21493 1140 20126 40612;40613 32606;32607 32607 2 9606 Homo sapiens 0.05987722848840349 QLESMIR Unmodified 875.45349 0.4534873 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 6 0 1 46.114 46.2 2 0.025976 12212 20230619_1886_Aki_TMTPro18x_K_F6 87.696 18.91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21494 3892 20127 40614 32608 32608 1 9606 Homo sapiens 0.01077869474261206 QLETEQREEQCR Unmodified 1604.7213 0.72128232 3020 H0Y5D3;H0Y3M0;Q13371 PDCL Phosducin-like protein yes no 0 0 1 1 0 1 30.114 30.114 3 1.046E-05 6047 20230619_1880_Aki_TMTPro18x_K_F1 137.84 113.9 18633 16382 21566 19082 24448 25331 22363 22856 26526 27071 27777 29490 31333 22179 24019 25303 40334 29914 17260 15018 21689 19139 25094 25091 22807 23625 26854 27203 28599 29562 31505 23312 25453 25632 38361 28402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35932000 21495 3020 20128 40615 32609 32609 1 9606 Homo sapiens -0.056889472466082225 QLETVLDDLDPENALLPAGFR Unmodified 2325.1852 0.18524117 4034 Q5HYL6;Q9NYL9 DKFZp686E1899;TMOD3 Tropomodulin-3 yes no 0 0 0 5 0 1 66.406 66.449 3 1.988E-05 20766 20230619_1885_Aki_TMTPro18x_K_F5 91.725 81.976 5186 3526.9 4228.9 4497.8 4127.9 5085.1 6442.4 4971.4 6043.3 5080.1 5508.2 6288.2 6788.7 5564 6761.7 5061.6 7331.5 9113 4782.9 3239.4 4378.2 4470.3 4361.3 5093 6343.5 5094.3 6153.9 5167.2 5740.9 6299.9 6885.9 5744.4 6898.2 5325.5 7021.5 8606.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7496100 21496 4034 20129 40616 32610 32610 1 9606 Homo sapiens 0.07565596216045378 QLEVEPEEPEAENK Unmodified 1639.7577 0.75771063 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 1.5 0.5 1 1 47.35 47.387 3 2.7355E-07 13312 20230619_1880_Aki_TMTPro18x_K_F1 140.31 128.14 125750 107290 119610 131490 134270 152660 151460 139250 170600 147520 170180 185450 189450 149640 164320 178230 183310 207150 116260 98414 122330 131070 138820 152450 152270 143460 172620 149850 175570 185310 191480 157120 168660 180220 175370 196360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 400350000 21497 2417 20130 40617;40618 32611;32612 32611 2 9606 Homo sapiens -0.036577918688863065 QLFCWLDK Unmodified 1108.5376 0.53755128 3771 V9HWC5;Q00169;B4E1U1;Q6NUL6 HEL-S-36;PITPNA Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 2 0 1 62.639 62.648 3 0.0069 19803 20230619_1881_Aki_TMTPro18x_K_F2 78.334 0 78560 74265 85675 67652 60511 83876 86405 79532 90299 90684 75229 76478 96123 78352 81780 105790 94980 92677 72767 67923 85979 69184 65641 83497 85754 81839 91223 90635 78827 78377 96760 82225 84271 105060 90733 88173 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98211000 21498 3771 20131 40619 32613 32613 1 9606 Homo sapiens -0.012375994288731818 QLFDQVVK Unmodified 975.53893 0.53893149 3456;2184 P15311;Q6NUR7;B2R6J2;V9HW42;J7M2B1;Q6PJT4;V9GZ54;P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;Q05CU6;Q6PKD3;V9HWC0;P26038;A0A8V8TKR9;E9PNV3;E9PQ82 EZR;HEL-S-105;EZR-ROS1;MSN;RDX;HEL70 Ezrin;Tyrosine-protein kinase receptor;Radixin;Moesin no no 0 0 0 7.5 0.5 1 1 54.801 54.866 2 0.0024942 15652 20230619_1888_Aki_TMTPro18x_K_F8 141.23 19.498 1690800 1349600 1527400 1807900 1649100 1894300 1969500 1804400 2153000 2225000 2080600 1997000 2569900 1922100 1897700 2514200 2312700 2397200 1562000 1239400 1569100 1788600 1712800 1906600 1972300 1861300 2181400 2219400 2158400 2035900 2573900 2017900 1967900 2508500 2209300 2277800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1433500000 21499 3456;2184 20132 40620;40621 32614 32614 1 9606 Homo sapiens 0.05018357931567152 QLFEEQAK Unmodified 991.49746 0.4974606 3911 Q15046;Q15046-2;Q6ZTI3 KARS Lysine--tRNA ligase yes no 0 0 0 3.5 0.5 1 1 47.567 47.627 2 0.0041454 12871 20230619_1883_Aki_TMTPro18x_K_F4 128.12 51.222 389080 284540 336880 380450 407380 417900 420670 391830 482340 472840 484770 510980 540490 428090 442330 540150 567660 506460 359130 261390 347850 376720 417860 419190 425190 404370 488140 474730 499790 514160 545100 450300 458940 538850 541500 481620 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 229130000 21500 3911 20133 40622;40623 32615;32616 32616 2 9606 Homo sapiens 0.0013717717223471482 QLFHPEQLITGK Unmodified 1409.7667 0.76669959 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;F8VQQ4;F8VVB9;F8VRZ4;F8VS66;F8VWV9;F8VX09;Q6QMJ5;C9K0S6;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;P0DPH7-2;C9J2C0;Q9NY65-2;Q9NY65;Q6PEY2;Q7Z3M3;A0A7P0T945;Q8N532;A0A7P0TA31 TUBA1B;TUBA1A;TUBA1C;TUBA1;TUBA8;TUBA4A;TUBA2;TUBA3E;DKFZp686L04275 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain no no 0 0 0 2.18 0.716 1 8 1 1 65.69 65.709 3 1.0557E-10 16697 20230619_1881_Aki_TMTPro18x_K_F2 192.18 0 2668900 1978000 2270800 2686700 1852200 2814300 2572800 2493200 2861900 2954900 3145900 3517800 3768500 3089200 3213700 3884400 3948800 4174300 2463400 1817300 2337100 2655500 1983600 2826300 2561800 2582700 2911000 2978800 3244000 3531300 3799900 3243500 3321900 3904700 3772600 3960900 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 98608000000 21501 2408;3747;4144 20134 40624;40625;40626;40627;40628;40629;40630;40631;40632;40633;40634 32617;32618;32619;32620;32621;32622;32623;32624;32625 32617 9 9606 Homo sapiens 0.07820691068741326 QLFHPEQLITGKEDAANNYAR Unmodified 2414.1979 0.19787154 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;F8VQQ4;F8VVB9;F8VRZ4;F8VS66;F8VWV9;F8VX09;Q6QMJ5;C9K0S6;P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;P0DPH7-2;C9J2C0;Q9NY65-2;Q9NY65;Q7Z3M3;A0A7P0T945;Q8N532;A0A7P0TA31 TUBA1B;TUBA1A;TUBA1C;TUBA1;TUBA8;TUBA4A;TUBA2;DKFZp686L04275 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain no no 0 0 1 8 0 2 68.321 68.367 4 1.278E-11 15238 20230619_1888_Aki_TMTPro18x_K_F8 139.83 116.95 704040 654840 798090 675150 686220 619670 742390 776870 535340 694360 888430 477660 491940 391280 887060 518650 460260 336550 652280 599530 800240 680370 721140 635160 739870 780390 571120 698750 875530 493230 532480 413230 869500 510270 443640 322040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12369000000 21502 2408;3747;4144 20135 40635;40636 32626;32627 32626 2 9606 Homo sapiens 0.04734052398953281 QLFLGGVDR Unmodified 1003.5451 0.5450795 1072 A0A0S2Z3H3;P12235;A8K787;V9GYG0;A0A0S2Z359;Q59EP7 SLC25A4 ADP/ATP translocase 1 yes no 0 0 0 8 0 1 51.974 52.051 2 0.00011463 14376 20230619_1888_Aki_TMTPro18x_K_F8 153.24 114.47 192790 167140 189170 223330 165120 193030 199920 195850 208200 185400 197520 195750 237430 173810 186400 223660 210830 222730 178300 153450 192320 220460 174410 197510 199870 199730 211170 188270 204870 197620 238450 182780 192000 223790 201570 211520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186700000 21503 1072 20136 40637 32628 32628 1 9606 Homo sapiens 0.04344876163088429 QLFSSLFSGILK Unmodified 1338.7547 0.75473792 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7.5 0.5 1 1 65.753 65.775 3 5.9605E-06 20423 20230619_1887_Aki_TMTPro18x_K_F7 139.78 100.51 218480 190110 201860 205560 184580 228100 219460 220510 246770 129390 110360 51525 77566 53755 167170 66423 68058 39318 201970 174160 206230 206720 194280 228750 220060 223340 244020 133490 118010 56112 84337 56142 162380 65372 65877 37737 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 411180000 21504 3758 20137 40638;40639 32629;32630 32629 2 9606 Homo sapiens 0.09891074325560112 QLGAQSPGR Unmodified 912.47773 0.47772821 630 A0A024RAM4;P46821;A2BDK6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 6.5 0.5 1 1 31.708 31.771 2 0.00097201 6456 20230619_1886_Aki_TMTPro18x_K_F6 120.15 53.123 15906 9432.2 19239 20281 21096 23967 18317 22982 23557 18080 24248 35749 20624 23121 27530 11699 30452 33666 14708 8730.7 19299 19618 21697 23908 18812 23412 23705 19069 24779 34990 21533 23657 27944 13223 29130 31731 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22935000 21505 630 20138 40640;40641 32631 32631 1 9606 Homo sapiens 0.017988459521461664 QLGDAFADLSLK Unmodified 1276.6663 0.66631685 3640 P53367-2;B7ZA10;B4E273;P53367;Q8N8M9 ARFIP1 Arfaptin-1 yes no 0 0 0 7 0 1 62.519 62.555 3 0.01086 18965 20230619_1887_Aki_TMTPro18x_K_F7 50.659 20.089 261440 227360 282450 266370 201960 270920 261830 255170 290400 292090 354840 290060 322530 279930 286780 373020 299950 334120 242000 208440 283910 265970 218090 273190 261620 262820 296640 293200 359130 294660 328490 293940 293480 370920 287100 317640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 257410000 21506 3640 20139 40642 32632 32632 1 9606 Homo sapiens 0.03905034015087949 QLGEANEEFALR Unmodified 1375.6732 0.67319314 2161 Q68CX8;A8KAQ6;B4E3W1;Q9Y679-3;Q9Y679 DKFZp686P12272;AUP1 Ancient ubiquitous protein 1 yes no 0 0 0 2.5 0.5 1 1 50.497 50.56 2 2.5468E-17 14718 20230619_1881_Aki_TMTPro18x_K_F2 244.74 200.39 111590 96434 97886 122070 109180 139180 130090 114800 149950 129960 135500 136800 146050 123120 132950 157800 144630 146610 103120 88481 100930 121340 113270 138830 130500 119430 151010 130820 140180 138150 148120 129280 136210 157320 138290 139360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85447000 21507 2161 20140 40643;40644 32633;32634 32633 2 9606 Homo sapiens 0.00038346895644281176 QLGEVELQCGICTK Unmodified 1633.7804 0.7803771 2095 A8K6T5;Q9UBL3-3;Q9UBL3;Q9UBL3-2;E5RFH5 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes no 0 0 0 6 0 1 54.388 54.465 3 1.0519E-11 15785 20230619_1886_Aki_TMTPro18x_K_F6 152.88 136.62 66773 45999 60107 60906 53380 62043 59783 64275 79936 73552 74305 74567 79559 68420 67924 85482 81823 84673 61631 42263 61514 60305 56228 62690 60556 65747 80062 73884 76719 75464 80501 71680 70140 85530 78173 80421 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190730000 21508 2095 20141 40645 32635 32635 1 9606 Homo sapiens -0.011161872766024317 QLGLPTALK Unmodified 939.57532 0.57531699 620 Q9UKD2;A0A024RAE1 MRTO4;C1orf33 mRNA turnover protein 4 homolog yes no 0 0 0 3 0 1 55.271 55.312 3 0.0015838 16497 20230619_1882_Aki_TMTPro18x_K_F3 93.111 71.647 68117 53409 53200 64118 58808 74802 63213 67301 82694 44468 36663 33321 41157 32482 49433 49011 45598 39970 62855 48996 55444 64000 60911 74626 64055 68652 81207 45907 39982 34357 42264 34418 49905 48481 43626 38080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72432000 21509 620 20142 40646 32636 32636 1 9606 Homo sapiens 0.1031123482825933 QLGLVVCR Unmodified 943.52732 0.52732094 4674 Q9UK45;A0A087X2I5;O75243 LSM7 U6 snRNA-associated Sm-like protein LSm7 yes no 0 0 0 4.5 1.12 1 1 1 1 47.178 47.248 2 0.0074457 12907 20230619_1882_Aki_TMTPro18x_K_F3 107.59 70.5 324610 288480 349190 340080 276150 341740 347570 320880 381700 334530 350890 312330 354710 290950 367690 391800 348220 339040 300510 264470 351560 339340 294750 344930 347440 329760 385520 336810 361470 317660 362430 306160 372730 389090 333300 322610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 378330000 21510 4674 20143 40647;40648;40649;40650 32637 32637 1 9606 Homo sapiens 0.053298376365887634 QLGSILK Unmodified 757.46979 0.46978929 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;B7ZB16;B4DR01;B3KWD0 XPO1 Exportin-1 yes no 0 0 0 2.5 0.5 1 1 51.697 51.749 2 0.016164 15207 20230619_1881_Aki_TMTPro18x_K_F2 110.31 32.569 644180 567320 573080 611080 660860 811760 711640 686170 846570 472130 458660 388910 420410 332680 626740 491760 532950 388880 595390 519700 589770 616270 681850 802630 718350 703900 838160 486890 487180 397260 440090 353470 627700 486320 509830 370980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 597050000 21511 3228 20144 40651;40652 32638;32639;32640 32638 3 9606 Homo sapiens 0.08135318702659333 QLGVAESESSGAPIDLLYELVK Unmodified 2317.2053 0.20530791 1591 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A669KAV7;O95785-4;O95785-3;A0A2R8YFV2;O95785 WIZ Protein Wiz yes no 0 0 0 6 0.816 1 1 1 66.501 66.537 3 5.0744E-12 20973 20230619_1886_Aki_TMTPro18x_K_F6 121.63 104.14 12557 10400 10115 11825 11037 11273 10700 10721 9376.8 9171.1 13432 15680 15368 11666 13684 14341 13525 13926 11594 9534.2 10500 11819 11377 11435 10775 10959 9786.4 9545.4 13692 15489 15530 12306 13939 14345 12945 13230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18180000 21512 1591 20145 40653;40654;40655 32641;32642 32641 2 9606 Homo sapiens 0.09939347156068834 QLHCYNER Unmodified 1118.4927 0.49272635 1914 A2RRP1-2;A2RRP1;A0A8V8TPL8;H0Y5G7;A0A8V8TQX6;A0A8V8TPS6 NBAS Neuroblastoma-amplified sequence yes no 0 0 0 5 0 1 28.639 28.712 3 0.006392 5227 20230619_1885_Aki_TMTPro18x_K_F5 86.67 74.804 11962 7586.1 15655 14994 25404 23099 20757 24025 16220 11310 18380 19724 12912 14127 17525 12095 20585 17228 11073 7009.7 15734 14631 25426 22757 21068 24124 16845 12361 18538 19455 13596 14635 17877 12494 19643 16321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3976200 21513 1914 20146 40656 32643 32643 1 9606 Homo sapiens -0.061780302421766464 QLHDDYFYHDEL Unmodified 1593.6736 0.67358707 3884 Q14257;Q14257-2;A8MXP8 RCN2 Reticulocalbin-2 yes no 0 0 0 1.5 0.5 1 1 50.516 50.542 3 1.7639E-05 14714 20230619_1881_Aki_TMTPro18x_K_F2 126.83 122.13 144550 79419 132930 164750 124750 150710 165190 148960 184940 172330 182910 203470 192080 166500 174460 198980 198630 222480 133300 73497 136110 158990 131450 153250 164780 153050 187150 173880 188300 203830 194950 174680 179190 200680 189980 210980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 307900000 21514 3884 20147 40657;40658 32644;32645 32645 2 9606 Homo sapiens -0.09950278175142557 QLHEDEEFAR Unmodified 1272.5735 0.57347909 3546 P35251-2;P35251;Q14756;Q14297 RFC1;LLDBP Replication factor C subunit 1 yes no 0 0 0 1 0 1 36.147 36.147 3 1.43E-06 8419 20230619_1880_Aki_TMTPro18x_K_F1 168.22 132.31 53381 21561 56339 53297 60533 65680 56397 61574 65299 59720 70293 68932 79041 61407 54926 62949 82601 66549 49226 20057 57022 51327 62427 65318 57418 63118 66213 60744 72226 69313 79226 63700 57837 63421 78654 63230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106600000 21515 3546 20148 40659 32646 32646 1 9606 Homo sapiens -0.051904707182984566 QLHFQEK Unmodified 928.47667 0.47666558 1873 B4DWG1;A0A994J542;B3KM47;Q9Y6Y8;Q9Y6Y8-2 SEC23IP SEC23-interacting protein yes no 0 0 0 6.5 0.5 1 1 39.606 39.682 3 0.016487 9121 20230619_1887_Aki_TMTPro18x_K_F7 82.452 52.286 79242 42673 83965 103030 136610 129090 112200 137710 131210 87396 138970 161540 112440 114450 109660 100330 154970 150570 73153 39604 85788 99299 136910 128670 115180 138690 132690 93282 141200 158970 115640 118780 114000 103900 147810 142490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116530000 21516 1873 20149 40660;40661 32647 32647 1 9606 Homo sapiens 0.009566315832330474 QLHLNQLIR Unmodified 1133.6669 0.66692597 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 3.5 0.5 1 1 46.067 46.128 3 2.8797E-07 12193 20230619_1883_Aki_TMTPro18x_K_F4 168.27 126.08 231680 188940 201840 185220 232870 255650 233590 240570 294350 126330 130550 125190 143770 107590 192830 179290 135850 144200 213990 172990 207880 188460 239600 252890 237260 243680 289380 134070 142330 126820 148590 115370 192010 177090 130590 137300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 490330000 21517 2702 20150 40662;40663 32648;32649 32649 2 9606 Homo sapiens 0.10543918245457462 QLICDPSYIPDR Unmodified 1475.7079 0.70786408 1080 A0A0S2Z3X8;P31150;B4DHX4;B4E070 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 5 0.816 1 1 1 52.256 52.314 2;3 1.5116E-06 14729 20230619_1885_Aki_TMTPro18x_K_F5 154.15 116.43 306680 267290 314490 341970 278720 320060 321040 322690 368020 349060 346820 361810 371240 321110 353360 397630 378840 420280 283750 245270 318450 338920 293580 325340 322810 330280 371440 351770 358050 365370 377340 336640 361300 399480 362520 398790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 319550000 21518 1080 20151 40664;40665;40666 32650;32651;32652 32652 3 9606 Homo sapiens -0.010961532879036895 QLICEDLLK Unmodified 1130.6005 0.60054547 4767 yes no 0 0 0 4 0 1 41.053 41.095 3 0.0041807 9985 20230619_1883_Aki_TMTPro18x_K_F4 76.465 2.6171 + 157240 102670 127020 138700 133080 166580 139410 160760 237630 193890 214210 269680 257820 232160 156820 294210 296970 275970 144980 94375 131710 137450 138360 166110 143250 165470 235470 196600 222980 269030 257210 243830 169720 293220 282630 262390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255190000 21519 4767 20152 40667 32653 32653 1 9606 Homo sapiens 0.04046921568533435 QLIDITGK Unmodified 886.51238 0.51238239 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;Q5VU77;Q5VU79;Q5VU78;Q5VU81;Q5VU80;Q14157-1;Q14157-4 UBAP2L Ubiquitin-associated protein 2-like no no 0 0 0 7.5 0.5 1 1 54.141 54.21 3 0.00045769 15343 20230619_1888_Aki_TMTPro18x_K_F8 139.74 57.461 95018 78677 86369 96133 92686 107350 114850 106970 128560 112130 112850 110850 124510 98527 101020 129520 119210 117810 87801 72174 88635 95799 96428 107690 114890 109460 129530 113040 117010 112220 125560 103700 104300 128920 113880 112020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136220000 21520 3877;3878 20153 40668;40669 32654 32654 1 9606 Homo sapiens 0.06458669040239329 QLIDQGK Unmodified 800.43922 0.43921744 4351 Q96G03;B4DN40;Q96G03-2;H0Y921 PGM2 Phosphoglucomutase-2 yes no 0 0 0 5.5 0.5 1 1 42.667 42.756 2 0.077813 10655 20230619_1886_Aki_TMTPro18x_K_F6 73.665 0 142070 116350 160370 174970 259400 243120 243670 234900 286430 226920 272410 289160 239390 206850 257750 192540 264260 263440 131510 106980 162960 172690 260810 240500 247780 240290 288600 231710 278870 287730 246250 215380 261770 197930 252770 249470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56622000 21521 4351 20154 40670;40671 32655 32655 1 9606 Homo sapiens 0.03101540317618401 QLIFTTEDNGK Unmodified 1264.6299 0.62993134 268 A0A024R3V8;Q99598;C4P0D6;C4P0D8;Q7Z3N9 TSNAX;DISC1;DKFZp686G1650 Translin-associated protein X yes no 0 0 0 5 0 1 52.956 53.028 2 0.02138 15053 20230619_1885_Aki_TMTPro18x_K_F5 87.258 50.146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21522 268 20155 40672 32656 32656 1 9606 Homo sapiens 0.008201571183690248 QLIMANPQMQQLIQR Oxidation (M) 1826.9495 0.94950811 187;2630 Q9UHD9;B4DZF1;B4DM19;A0A024R258;B3KNI8;B3KNI2;Q9UMX0-2;Q9UMX0;Q59FJ2 UBQLN2;UBQLN1 Ubiquilin-2;Ubiquilin-1 no no 0 1 0 3 0 1 55.967 56.004 3 0.015315 16788 20230619_1882_Aki_TMTPro18x_K_F3 55.98 33.782 28123 21772 27438 32425 31539 39956 40134 32425 48378 34756 35530 35011 39476 35617 41101 44871 45690 46248 25990 20021 28038 31942 32714 39632 40180 33730 48261 35057 37241 35577 40270 37205 42040 45007 43676 43910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8786500 21523 2630;187 20156 40673 32657 32657 119 1 9606 Homo sapiens 0.06911134076744929 QLIVANAGDSR Unmodified 1142.6044 0.60438529 2230 Q6IAU5;B2R665;O15355;B4DDC8;B3KXL8;Q96IN7;Q59GB2 PPM1G Protein phosphatase 1G yes no 0 0 0 5.5 0.5 1 1 42.048 42.137 2 8.9453E-12 10373 20230619_1885_Aki_TMTPro18x_K_F5 233.09 193.04 159730 123620 156160 176490 167030 186190 179090 178170 210300 198650 208470 214030 216040 176800 183060 213570 246700 214570 147620 113620 159220 173940 173010 187300 180850 183150 212400 200150 214310 215300 218700 185570 190390 214000 235200 203910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 396050000 21524 2230 20157 40674;40675 32658;32659 32658 2 9606 Homo sapiens 0.03878727386609171 QLIVGVNK Unmodified 869.53345 0.53345218 1560;3997;1378 Q05639;A0A2U3TZH3;Q59GP5;A0A2R8Y488;P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;A0A4D5RA98;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;Q9H2I7;A0A4D5RA52;A0A087WV01;Q53HR1;Q9NZS6;Q16577;A0A4D5RA61;A0A4D5RBK4;A0A4D5RAF1;A0A4D5RBI9;A9X7H1;Q53GE9 EEF1A2;EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha 2;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 5.08 2.13 1 1 1 2 2 2 2 2 49.809 49.872 2;3 0.00057532 13444 20230619_1888_Aki_TMTPro18x_K_F8 133.12 72.155 2646000 2100100 2154500 2227400 2375000 2522600 2515900 2458600 2831500 3156900 2730800 2810200 2527800 3347400 1980600 4487600 2414000 2923000 2442400 1924300 2233100 2244000 2454000 2528300 2538300 2534400 2865400 3143100 2797500 2889400 2569200 3487600 2062100 4396600 2309000 2790900 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 29651000000 21525 1378;1560;3997 20158 40676;40677;40678;40679;40680;40681;40682;40683;40684;40685;40686;40687;40688 32660;32661;32662;32663;32664;32665;32666;32667 32667 8 9606 Homo sapiens 0.09346679139764547 QLIVPPHLAHGESGAR Unmodified 1680.906 0.90598704 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;Q6ZME7;H0Y827;Q96AY3-2 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 0 0 8 0 1 39.512 39.501 3 0.00039935 9240 20230619_1888_Aki_TMTPro18x_K_F8 82.259 63.128 22879 14737 20267 19074 22392 21382 20492 21513 23266 21199 18975 17245 20432 16587 20602 22201 24277 18033 21108 13542 20822 18942 23024 21457 20865 21953 23384 21325 19728 17676 20818 17430 21156 21984 23149 17195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29459000 21526 167 20159 40689 32668 32668 1 9606 Homo sapiens 0.09277028686119593 QLLAGGIAGAVSR Unmodified 1211.6986 0.69862003 2648 B7ZB41;B4E290;Q6NUK1-2;Q6NUK1;A0A3B3IU96 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes no 0 0 0 4 0 1 52.898 52.92 2 1.0446E-12 15315 20230619_1883_Aki_TMTPro18x_K_F4 176.62 123.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21527 2648 20160 40690 32669 32669 1 9606 Homo sapiens 0.10123866208732579 QLLAPGNSAGAFLIR Unmodified 1526.8569 0.85691158 2023;3404 A8K379;P07948;B4DQ79;Q6NUK7;P07948-2 LYN Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lyn no no 0 0 0 5 0 1 60.878 60.928 2 4.229E-06 18281 20230619_1885_Aki_TMTPro18x_K_F5 157.99 88.797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21528 2023;3404 20161 40691 32670 32670 1 9606 Homo sapiens 0.11455740397173031 QLLAPVVK Unmodified 866.55894 0.55893865 627 B7Z7U6;F5H7S7;A0A024RAJ8;Q13576;B7Z881;Q59HA3;Q13576-3;Q13576-2 IQGAP2 Ras GTPase-activating-like protein IQGAP2 yes no 0 0 0 3 0 1 51.932 51.998 3 0.022159 15029 20230619_1882_Aki_TMTPro18x_K_F3 72.547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21529 627 20162 40692 32671 32671 1 9606 Homo sapiens 0.12032153662175915 QLLDDHK Unmodified 867.44503 0.4450311 28 H3BTL2;H3BS02;B4DGN9;A0A024QZA9;O14874-2;O14874-3;O14874 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial yes no 0 0 0 4 0 1 39.813 39.855 3 0.0079925 9488 20230619_1883_Aki_TMTPro18x_K_F4 96.027 66.042 56737 33844 47123 46632 53404 56355 52585 51251 71839 50878 64199 70738 62046 55600 57541 52829 75185 65142 52301 31131 48753 46165 54992 56127 53655 52713 71705 52087 66170 70362 63220 57694 59531 53847 71697 61778 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24873000 21530 28 20163 40693 32672 32672 1 9606 Homo sapiens 0.006006388292803422 QLLDETSAITLTSTWK Unmodified 1805.9411 0.94109472 1699 A0A7P0T8N8;O14776-2;O14776;G3V220 TCERG1 Transcription elongation regulator 1 yes no 0 0 0 8 0 1 63.363 63.386 3 2.2606E-05 19270 20230619_1888_Aki_TMTPro18x_K_F8 96.666 84.039 34052 27714 30817 33885 25783 32004 30543 33467 34391 39454 40519 41023 45859 36489 45375 43924 39029 44885 31461 25425 31518 33693 27347 32534 30665 34247 35088 39586 41531 41423 46580 38196 45793 44081 37444 42601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145140000 21531 1699 20164 40694 32673 32673 1 9606 Homo sapiens 0.07036181912735628 QLLDFSQK Unmodified 977.5182 0.51819605 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V2S3;A0A7I2V3N0;A0A7I2V4A3;A0A7I2YQX3;C9JKM9;C9J673;A0A7I2V2C5;A0A7I2V3J1;A0A7I2YQP1;A0A7P0Z4B7;F8WF71;C9IYM2;A0A7I2V396 XPO1 Exportin-1 yes no 0 0 0 5.33 3.09 1 1 1 55.356 55.417 2 2.46E-06 16599 20230619_1880_Aki_TMTPro18x_K_F1 170.3 91.181 346610 261260 294510 309120 310710 377050 353380 341090 390100 405350 400110 413580 441670 349310 379570 463540 443420 450110 319940 239680 303900 309170 323020 375240 354960 352640 395920 406450 411930 417330 446380 368590 391050 462970 423690 427630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148000000 21532 3228 20165 40695;40696;40697 32674;32675 32674 2 9606 Homo sapiens 0.028537675519032746 QLLDMHFK Oxidation (M) 1046.5219 0.52190122 1351 A0A2R8Y595;A0A2R8YFL0;P49711-2;P49711;B3KSE4 CTCF Transcriptional repressor CTCF yes no 0 1 0 8 0 1 46.751 46.8 3 0.056536 12206 20230619_1888_Aki_TMTPro18x_K_F8 44.704 21.478 51278 40149 49577 54437 53761 57273 58730 61301 75965 50660 52814 57511 61156 44653 65983 56436 54314 62196 47389 36878 50597 53833 55657 57782 59448 62061 75418 52012 55696 57638 62326 47148 66315 56876 52135 58984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46160000 21533 1351 20166 40698 32676 32676 853 1 9606 Homo sapiens 0.0005011405410186853 QLLEDGIRK Unmodified 1070.6084 0.60840804 2526 E7EQI7;B4DLF2;Q53EL1;Q12768 KIAA0196 WASH complex subunit strumpellin yes no 0 0 1 7 0 1 45.649 45.736 3 0.0062791 11626 20230619_1887_Aki_TMTPro18x_K_F7 62.633 35.661 65807 54859 62861 68292 66432 76515 78038 74987 88928 76246 81343 86362 86376 71672 83758 98795 95365 80271 60834 50333 64200 67971 69068 76703 78332 76758 89638 77316 84082 86748 87880 75816 85935 97770 91028 76493 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24878000 21534 2526 20167 40699 32677 32677 1 9606 Homo sapiens 0.07592816880332975 QLLEEELAR Unmodified 1099.5873 0.58733824 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 0 2 0 1 52.095 52.134 2 0.00081725 15389 20230619_1881_Aki_TMTPro18x_K_F2 122.33 79.302 98826 85782 96403 100830 114500 133280 146360 148860 164700 153420 145540 145160 172700 135800 140090 173080 147170 152560 91398 78649 98481 101060 118410 132640 146230 151030 166000 154560 151400 147470 173770 142390 143600 172100 140780 145100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125790000 21535 3921 20168 40700 32678 32678 1 9606 Homo sapiens 0.041528067808030755 QLLHLAEEK Unmodified 1079.5975 0.597509 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;Q6ZS03;B4DKR8;Q96CF6;Q2HJC8;Q6ZN49;H7BZC3;H7C2D1 HDLBP Vigilin yes no 0 0 0 5.5 0.5 1 1 49.356 49.433 3 2.6768E-05 13654 20230619_1886_Aki_TMTPro18x_K_F6 156.48 111.11 302610 220810 264930 264430 283130 324700 302200 291630 387310 328820 329310 300670 337180 281270 292030 380900 330440 333030 279330 202620 272550 264300 293500 323000 306180 301180 387320 329660 340690 306090 341760 296040 300370 378230 315810 316810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 372300000 21536 292 20169 40701;40702 32679;32680 32680 2 9606 Homo sapiens 0.060894145060501614 QLLHNFPPDQLTSSGAPFWSGPK Unmodified 2523.2547 0.25465814 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 3.5 0.5 1 1 61.569 61.585 4 3.778E-06 18957 20230619_1883_Aki_TMTPro18x_K_F4 95.957 81.703 35481 30086 38502 38021 35179 37361 39337 39340 35089 34377 36018 31123 28807 25632 38468 26944 28885 28995 32839 27606 38804 37746 36876 37878 39312 39926 36021 34897 36588 31562 30083 26693 38355 27212 27731 27518 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175800000 21537 134 20170 40703;40704 32681 32681 1 9606 Homo sapiens 0.053960999554874434 QLLIDPEDDVRDNILK Unmodified 1895 6.5851E-06 704 C9J126;A0A024RC42;P19022-2;P19022;A0A6Q8PHJ8;C9JMH2;A0A6Q8PF58;A0A6Q8PG20;Q8ND09;A0A0G2JRA4;A0A087WX99;Q8NB64;B2RCN5;P55283-2;P55283 CDH2;DKFZp434K1130;CDH4 Cadherin-2;Cadherin-4 yes no 0 0 1 4 0 1 61.01 61.014 3 0.00033275 18734 20230619_1883_Aki_TMTPro18x_K_F4 87.85 67.469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21538 704 20171 40705 32682 32682 1 9606 Homo sapiens 0.08830658207079978 QLLLSFKPVMQK Unmodified 1430.8319 0.83194239 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;Q2TU89;Q3LIE0;H0YE22 EIF4G2;AAG1;Nbla00315 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 1 7 0 1 61.139 61.178 3 0.01777 18312 20230619_1887_Aki_TMTPro18x_K_F7 64.827 46.492 117980 100420 125730 130150 113080 152490 134690 127650 164550 125250 103790 97069 115390 84906 113590 120130 109730 85394 109180 92162 126950 129260 119270 151840 135440 132080 163460 125960 109830 99438 117250 89879 115350 118210 104850 81565 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146980000 21539 3752 20172 40706 32683 32683 1 9606 Homo sapiens 0.13375969270236965 QLLLTADDR Unmodified 1043.5611 0.56112349 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;H3BR04;H3BUH7;H3BMQ8;H3BU78 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 4 0.816 1 1 1 48.392 48.458 2 3.7763E-12 13221 20230619_1883_Aki_TMTPro18x_K_F4 234.26 145.9 1744400 1174000 1342800 1645800 1447800 1886600 1721800 1565200 1977900 1930400 1919500 2096700 2020200 1634400 1913700 2099600 2043200 2128700 1608200 1079400 1401300 1625400 1506500 1881000 1727400 1631600 1998400 1936700 1977900 2104500 2053100 1726100 1956000 2103500 1954300 2021200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3451899999.9999995 21540 3378 20173 40707;40708;40709 32684;32685 32685 2 9606 Homo sapiens 0.04108537609317864 QLLMLQSLE Unmodified 1073.5791 0.57908174 3192 M0R0N4;M0QYZ2;P53680;M0QZ21;X6R390;P53680-2;M0R1S0 AP2S1 AP-2 complex subunit sigma yes no 0 0 0 6 0 1 64.905 64.949 2 0.012227 20319 20230619_1886_Aki_TMTPro18x_K_F6 81.119 69.271 39632 31459 41966 38208 32285 42124 37057 41059 44016 26917 28277 28454 25699 27992 36869 32217 33235 30355 36658 28862 42270 38100 34484 42255 37328 41636 43760 28039 29668 28825 26892 29081 37067 32223 31814 28862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82501000 21541 3192 20174 40710 32686 32686 1 9606 Homo sapiens 0.045235365398411886 QLLNCLHVVTLYNR Unmodified 1741.9298 0.92975895 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 6 0 1 57.849 57.918 3 1.8117000000000002E-70 17274 20230619_1886_Aki_TMTPro18x_K_F6 292.76 252.04 59416 51764 61557 61824 60926 70066 69191 67275 74982 60201 64118 60875 55578 45855 74932 61814 62627 62009 54979 47466 62353 61731 63568 70157 69465 68738 75571 61255 65947 61282 57899 48648 75104 61914 60036 58897 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326210000 21542 3432 20175 40711 32687 32687 1 9606 Homo sapiens 0.08847126128284799 QLLPCEMACNEK Unmodified 1491.652 0.65200546 4582 Q9NR45;V9HW39;Q5TBR0 NANS;HEL-S-100 Sialic acid synthase yes no 0 0 0 6 0 1 51.313 51.39 3 4.3364E-06 14508 20230619_1886_Aki_TMTPro18x_K_F6 141.58 129.89 78058 69742 81338 88472 81654 106250 101970 103520 109610 90217 91030 87652 89848 65249 93555 90775 95689 97514 72245 63984 82438 88034 85441 105970 101860 105570 110430 91820 94223 88367 91847 69466 95170 91190 91546 92542 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107140000 21543 4582 20176 40712 32688 32688 1 9606 Homo sapiens -0.07415445791389175 QLLQANPILEAFGNAK Unmodified 1725.9414 0.94136949 148;1719;4165 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;A0A494C024;A0A2R8Y4C3;A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43 MYH9;MYH11;MYH14 Myosin-9;Myosin-11;Myosin-14 no no 0 0 0 3.5 0.5 1 1 64.233 64.253 3 6.0387E-26 20228 20230619_1882_Aki_TMTPro18x_K_F3 232.37 209.46 158820 142430 156970 169010 161230 187370 183730 215910 219690 233050 201620 227310 237620 186600 203680 279040 219690 260040 146930 130580 159770 168800 167850 188710 185130 218900 221250 234330 209450 229650 239680 198760 209040 277600 210320 247040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 410460000 21544 148;1719;4165 20177 40713;40714 32689;32690 32689 2 9606 Homo sapiens 0.10743646423270548 QLLQHECPR Unmodified 1179.5819 0.58187571 3070 H3BPG6;Q86UK7-2;Q86UK7-3;Q86UK7 ZNF598 Zinc finger protein 598 yes no 0 0 0 5.5 0.5 1 1 33.854 33.917 3 1.9636E-05 7152 20230619_1885_Aki_TMTPro18x_K_F5 160.59 113.98 51786 37999 49894 49600 56412 64053 62165 53436 74190 57451 69066 65840 78601 49924 56489 68111 74450 60907 47839 34899 50946 49319 58264 63420 62687 55454 74635 58142 71469 65952 78766 53043 58878 67718 70966 57976 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46853000 21545 3070 20178 40715;40716 32691;32692 32691 2 9606 Homo sapiens -0.0007319528267544229 QLLQLYLQALEK Unmodified 1458.8446 0.84461556 296 A0A024R4H5;Q53HN4;O00273-2;O00273 DFFA DNA fragmentation factor subunit alpha yes no 0 0 0 5 0 1 65.684 65.727 3 0.0021109 20475 20230619_1885_Aki_TMTPro18x_K_F5 76.326 49.211 11736 11876 14412 12633 20248 17852 15585 18166 17701 16830 17056 15562 15243 17897 19845 14680 16522 16095 10888 10873 14488 12776 20403 17679 16059 18483 17895 17045 17451 15936 15863 18196 19887 14905 15837 15274 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11965000 21546 296 20179 40717 32693 32693 1 9606 Homo sapiens 0.1335470393412379 QLLTLSSELSQAR Unmodified 1444.7886 0.78855725 3456 P15311;Q6NUR7;B2R6J2;B7Z5V2;B7Z437;B7Z9R6 EZR Ezrin yes no 0 0 0 1 0 1 59.864 59.864 3 0.00031191 18434 20230619_1880_Aki_TMTPro18x_K_F1 84.753 68.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21547 3456 20180 40718 32694 32694 1 9606 Homo sapiens 0.08395451026649425 QLLTLSSELSQARDENK Unmodified 1930.996 0.99598384 3456 P15311;Q6NUR7;B2R6J2;B7Z5V2;B7Z437;B7Z9R6 EZR Ezrin yes no 0 0 1 7 0 1 56.255 56.313 4 3.4855999999999997E-23 16277 20230619_1887_Aki_TMTPro18x_K_F7 202.34 171.23 48583 55533 55286 55670 62155 54576 54399 66439 59020 62102 60371 48141 63001 46576 52321 67099 65799 52558 45086 50799 55685 56252 63679 55612 55499 66891 59970 62540 61900 49527 63673 49206 54212 66242 62734 50122 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363780000 21548 3456 20181 40719 32695 32695 1 9606 Homo sapiens 0.06772568713358851 QLMEVFK Oxidation (M) 909.46299 0.46298935 2788 CON__P41361 yes yes 0 1 0 7 0 1 50.934 51.012 2 0.056667 14055 20230619_1887_Aki_TMTPro18x_K_F7 75.213 53.666 + 44130 40864 44735 50125 61358 69042 48177 50646 95554 74798 139100 157010 68007 74367 155780 71631 107150 97824 40844 37473 45671 50085 62176 67961 50829 53689 96146 76801 137780 152710 75873 79161 153710 73784 102930 92670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42338000 21549 2788 20182 40720 32696 32696 1667 1 0.004636377597876162 QLMEVFK Unmodified 893.46807 0.46807473 2788 CON__P41361 yes yes 0 0 0 8 0 1 58.281 58.327 2 0.019115 17116 20230619_1888_Aki_TMTPro18x_K_F8 106.36 51.831 + 120280 86707 97831 134370 102080 125600 111410 96188 148990 161640 219120 260420 163160 165460 264430 170320 175600 185680 110970 79796 101540 131520 106170 126940 112970 102220 152350 162810 219520 256410 173150 173850 261700 172280 168940 176160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142920000 21550 2788 20182 40721 32697 32697 1 0.017079416223964472 QLNENQVR Unmodified 999.50976 0.50975662 1200 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;E5RJX4 PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase yes no 0 0 0 3.5 0.5 1 1 32.745 32.81 2 0.00094009 6654 20230619_1883_Aki_TMTPro18x_K_F4 152.63 108.82 36841 19600 46274 43581 61073 70300 45841 53620 49843 39095 70124 87884 56110 60452 66175 24444 81759 74776 34064 18164 46426 42338 61858 68612 47282 55531 51282 41778 70519 85943 58277 61337 67731 28109 78027 70515 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67661000 21551 1200 20183 40722;40723 32698;32699 32699 2 9606 Homo sapiens 0.009982136352846283 QLNNHFGR Unmodified 984.48896 0.4889616 2891 E7EMW7;O95071-2;O95071;E5RFK7 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 0 0 0 1 0 1 32.18 32.18 3 0.00073058 6853 20230619_1880_Aki_TMTPro18x_K_F1 110.81 86.653 34236 28299 31394 30966 37170 36376 42824 41339 44192 41882 46524 45618 49505 37074 33554 51262 49952 45822 31638 25933 32213 31148 38263 36506 42884 41897 45030 42403 47728 45877 49652 39286 35402 50927 47607 43594 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21728000 21552 2891 20184 40724 32700 32700 1 9606 Homo sapiens -0.0039033195372439877 QLNNLALLCQNQGK Unmodified 1612.8355 0.83552421 3808;740 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5;A0A024R0V3;K7EL76;Q6P597-2;Q6P597;Q6P597-3;A0A024RCZ8;Q9NSK0;Q9NSK0-3;Q9NSK0-5;H7C4M1 KLC1;KNS2;KLC3;KLC4 Kinesin light chain 1;Kinesin light chain 3;Kinesin light chain 4 no no 0 0 0 3 0 1 55.712 55.753 3 9.8466E-07 16682 20230619_1882_Aki_TMTPro18x_K_F3 125.54 91.156 91102 62365 71251 97164 62114 98763 84639 121960 122500 93477 105560 85647 106160 86907 107390 122490 106500 87108 84002 57412 74089 95233 66208 100130 85274 122100 121840 95779 109000 87534 108380 91451 109210 120510 101770 83181 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203070000 21553 3808;740 20185 40725 32701 32701 1 9606 Homo sapiens 0.05361987306127958 QLNPESIRPGGPGGLSR Unmodified 1733.9173 0.91728001 3081 H7BXY3;Q7L2E3-3;Q7L2E3;Q7L2E3-2 DHX30 Putative ATP-dependent RNA helicase DHX30 yes no 0 0 1 2 0 1 43.818 43.9 3 0.00046085 11631 20230619_1881_Aki_TMTPro18x_K_F2 76.049 38.028 122900 78743 98785 113630 114050 112420 113940 114820 128670 142490 161500 152850 146730 127830 147380 134470 146460 134160 113310 72443 102650 111830 117220 113840 115390 117890 131600 142800 163460 153830 150240 133010 149730 135070 140060 127480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114640000 21554 3081 20186 40726 32702 32702 1 9606 Homo sapiens 0.07967805989574117 QLNVNAK Unmodified 785.43955 0.43955179 3455 P15170-2;P15170-3 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 0 0 0 8 0 1 40.787 40.78 2 0.023306 9782 20230619_1888_Aki_TMTPro18x_K_F8 100.74 40.384 37898 16827 43160 42473 64923 64189 49355 63614 64664 40339 60194 66239 52429 52785 58682 37114 68859 68039 34983 15650 43717 41026 65250 63199 51170 64350 64736 42830 61681 65583 54120 54056 59998 39355 65780 64299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21778000 21555 3455 20187 40727 32703 32703 1 9606 Homo sapiens 0.038249600374570036 QLNYTIGEVPISFVDR Unmodified 1849.9574 0.95741349 1110 A0A0S2Z4Y5;Q5QPK2;H0Y368;O60762;A0A804HJ93 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes no 0 0 0 8 0 1 62.876 62.901 3 0.0041404 19024 20230619_1888_Aki_TMTPro18x_K_F8 60.542 44.318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21556 1110 20188 40728 32704 32704 1 9606 Homo sapiens 0.06643307869489945 QLPAQPPEHAVDGEGFK Unmodified 1818.8901 0.89006221 3876 Q14151;A0PJ47;K7EQU4;K7ERX3;B4DU53 SAFB2 Scaffold attachment factor B2 yes no 0 0 0 4.5 0.5 1 1 47.135 47.194 3 3.8319E-09 12547 20230619_1885_Aki_TMTPro18x_K_F5 125.45 111.77 128650 98540 120120 141820 129990 167320 159720 143820 171320 178670 179910 186150 215820 164070 146330 192200 203870 200250 118840 90582 123070 139900 135230 166610 159620 149530 174300 178950 185720 187860 215730 171570 153440 193010 194480 190130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136700000 21557 3876 20189 40729;40730 32705;32706 32706 2 9606 Homo sapiens 0.013372776585129031 QLPEEDFRQPPEEDLR Unmodified 1996.949 0.94903365 4210 Q8IXT5 RBM12B RNA-binding protein 12B yes yes 0 0 1 1 0 1 48.074 48.074 3 1.1777E-14 13594 20230619_1880_Aki_TMTPro18x_K_F1 185.25 156.15 27701 28475 26974 31789 28625 29439 32758 29254 26813 32472 32036 25263 34994 26052 34996 34956 30342 27582 25649 26080 27515 31805 29675 29961 32608 30000 27892 32415 32721 26035 35585 27332 35329 34575 29057 26286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33291000 21558 4210 20190 40731 32707 32707 1 9606 Homo sapiens -0.009562908377574786 QLPIMVVGEHK Unmodified 1249.6853 0.68527815 3340 O94967-2;O94967;O94967-3;O94967-4;B4DHA1 WDR47 WD repeat-containing protein 47 yes no 0 0 0 1 0 1 52.086 52.086 3 0.00018524 15222 20230619_1880_Aki_TMTPro18x_K_F1 112.51 72.075 60606 46655 55610 62909 53908 63396 57893 57951 70774 70280 71853 72390 77795 58765 67329 81459 74297 78394 55982 42854 56924 62181 56299 63930 58557 59924 71432 70432 73925 72946 78665 62297 69114 81277 71048 74476 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38658000 21559 3340 20191 40732 32708;32709 32709 2 9606 Homo sapiens 0.07042292105143133 QLPTAAPDKTEVTGDHIPTPQDLPQR Unmodified 2824.4355 0.43553563 358 H3BQ52;A0A024R5U3;H3BMD8;P56211;P56211-2 ARPP19;ARPP-19 cAMP-regulated phosphoprotein 19 yes no 0 0 1 6 0 1 50.668 50.745 4 4.875E-05 14157 20230619_1886_Aki_TMTPro18x_K_F6 81.974 71.574 46720 38345 37652 44196 40825 37982 38480 43986 45714 47188 47658 37403 44369 31859 51550 40114 37481 32501 43132 35157 39073 44083 42070 39049 39186 44596 46258 47203 48609 38251 45666 33509 51453 39796 35964 30969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 283500000 21560 358 20192 40733 32710 32710 1 9606 Homo sapiens 0.0962952875074734 QLPVLDK Unmodified 811.48035 0.48035398 4513;1961 Q9H492;Q9H492-2;H3BTL1;H6UMI0;Q658J6;Q9GZQ8;A6NCE7 MAP1LC3A;MAP1LC3B;DKFZp762B153;MAP1LC3B2 Microtubule-associated proteins 1A/1B light chain 3A;Microtubule-associated proteins 1A/1B light chain 3B;Microtubule-associated proteins 1A/1B light chain 3 beta 2 no no 0 0 0 8 0 1 52 52.077 2 0.01999 14420 20230619_1888_Aki_TMTPro18x_K_F8 94.302 20.118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21561 4513;1961 20193 40734 32711 32711 1 9606 Homo sapiens 0.06707301357073447 QLQAAAAHWQQHQQHR Unmodified 1936.9517 0.95170846 3610 Q8NF45;P49750;P49750-3;P49750-1;F8VU51;Q86YA8 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 0 3 0 1 34.991 35.051 4 8.6905E-11 7585 20230619_1882_Aki_TMTPro18x_K_F3 110.55 90.194 17193 10394 16251 15859 18537 22500 20597 20437 22922 14884 18951 19161 17150 14262 22657 17297 21332 18405 15865 9571.4 16624 15648 19147 22184 20715 20869 23027 15482 19567 19100 17821 15033 22838 17414 20403 17480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11150000 21562 3610 20194 40735 32712 32712 1 9606 Homo sapiens 0.020710669210529886 QLQAETEPIVK Unmodified 1254.682 0.68196691 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;A0A7I2V3I2;H0YBP5;A0A7I2V4G3;A0A161SXE1;A0A7I2V570;A0A7I2V429;H0YBR5;A0A7I2V3W9;A0A7I2V2Q9 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 0 4.5 0.5 1 1 48.409 48.468 3 0.00074357 13250 20230619_1883_Aki_TMTPro18x_K_F4 93.345 70.466 344900 338220 346180 393710 399250 417860 413190 385670 455710 449160 445460 427760 489520 413200 366350 505050 463480 423090 319320 309940 352630 393360 410680 420140 417060 398040 461610 449980 459200 434890 492410 431470 380810 501100 442240 402870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 497540000 21563 1659 20195 40736;40737 32713;32714 32713 2 9606 Homo sapiens 0.0648132053208883 QLQAIEFNK Unmodified 1089.5819 0.58185893 3327 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;O76094-2;Q71V07 HEL103;SRP72 Signal recognition particle subunit SRP72 yes no 0 0 0 7.5 0.5 1 1 53.346 53.421 2;3 0.00056905 15013 20230619_1888_Aki_TMTPro18x_K_F8 95.775 75.15 93598 73164 87945 99985 84377 110120 101550 101730 123880 119430 116530 121000 119090 99847 95533 138090 149920 133050 86480 67211 89854 98866 88563 110330 102090 104980 124650 119810 120020 122060 120410 105720 100790 137740 142800 126490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 343150000 21564 3327 20196 40738;40739 32715;32716 32716 2 9606 Homo sapiens 0.04065127988974382 QLQALSSELAQAR Unmodified 1413.7576 0.75759147 2184 P35241;B0YJ88;P35241-5;A0A2R8Y5S7;P35241-4;B7Z2S7;P35241-2;Q9NST9;A0A2R8Y4H6 RDX;DKFZp434I0812 Radixin yes no 0 0 0 7 0 1 56.255 56.313 3 1.2615E-15 16273 20230619_1887_Aki_TMTPro18x_K_F7 202.29 148.52 36833 27741 37073 37365 30205 34160 33953 36338 43520 41593 38368 37441 43748 36888 38051 49784 37582 41282 34044 25484 37534 36905 32039 34832 34334 37112 43602 41634 39833 38200 44206 38744 38835 49312 35989 39286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216190000 21565 2184 20197 40740 32717 32717 1 9606 Homo sapiens 0.06726297712407359 QLQDEMLR Oxidation (M) 1047.5019 0.50189405 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80;A0A6Q8PGH0 LMNA Prelamin-A/C;Lamin-A/C yes no 0 1 0 2 0 1 38.027 38.091 2 0.013883 8930 20230619_1881_Aki_TMTPro18x_K_F2 90.601 35.825 100460 71624 75453 108960 160590 157520 149190 151700 206780 128630 147470 174830 159190 134310 128260 172720 179310 181870 92630 65903 80225 107500 159760 155440 152690 154720 204790 132780 154740 174010 160720 141880 134030 173320 171080 172630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 267040000 21566 1428 20198 40741 32718 32718 908 1 9606 Homo sapiens -0.01995681676521599 QLQDEMLR Unmodified 1031.507 0.50697943 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80;A0A6Q8PGH0 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 3.5 0.5 1 1 44.983 45.042 2 7.9708E-07 11826 20230619_1882_Aki_TMTPro18x_K_F3 204.03 93.722 171790 129400 135510 165910 201750 258290 228610 239720 327480 230810 229790 280090 295580 230550 217230 309310 293180 303060 158490 118810 141950 165690 205580 253590 231790 245810 323890 235440 243480 280410 295850 243660 226970 308920 279840 287880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 711820000 21567 1428 20198 40742;40743 32719 32719 1 9606 Homo sapiens -0.007513778138900307 QLQDIATLADQR Unmodified 1370.7154 0.7153923 3354 O95373;B3KQG6;B3KNG9 IPO7 Importin-7 yes no 0 0 0 5.5 0.5 1 1 54.652 54.724 3 2.4341E-07 15903 20230619_1886_Aki_TMTPro18x_K_F6 129.37 110.17 93001 74982 87693 82483 69212 84866 92978 88439 106820 109060 110960 100340 114890 97406 97918 134380 123120 121690 85947 68724 89227 82774 74080 85729 92818 90658 108210 108860 113730 102250 116350 102520 101460 133610 117550 115720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 544980000 21568 3354 20199 40744;40745 32720;32721 32721 2 9606 Homo sapiens 0.04486322304046553 QLQDIATLADQRR Unmodified 1526.8165 0.81650333 3354 O95373;B3KQG6;B3KNG9 IPO7 Importin-7 yes no 0 0 1 8 0 1 49.048 49.115 3 3.7836E-36 13167 20230619_1888_Aki_TMTPro18x_K_F8 274.24 218.98 240080 286940 244470 180880 238850 200400 254530 246770 202660 284260 226920 169330 238960 181160 234080 258980 254810 162860 222670 261660 247420 192300 248260 202830 254260 249750 210880 281550 231900 177700 243130 190660 239360 253580 242960 156040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 483080000 21569 3354 20200 40746 32722 32722 1 9606 Homo sapiens 0.07416774006742344 QLQDSCEEDLSEK Unmodified 1579.6672 0.66718106 1977 A6NKD9;H0YJY5;H0YJE0;G3V5D5;G3V2D7 CCDC85C Coiled-coil domain-containing protein 85C yes no 0 0 0 1 0 1 45.743 45.743 3 0.0026365 12607 20230619_1880_Aki_TMTPro18x_K_F1 72.175 64.477 28247 21044 25764 30151 33419 35625 33870 31560 40455 32954 34051 29921 32263 29687 28933 35134 38948 39230 26086 19346 26521 29755 34122 35510 34310 32563 40566 33162 35128 30527 32857 30922 30067 35428 37170 37217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14693000 21570 1977 20201 40747 32723 32723 1 9606 Homo sapiens -0.09946584188810448 QLQEDAAR Unmodified 929.45666 0.45665842 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 32.114 32.144 2 0.00013593 6852 20230619_1880_Aki_TMTPro18x_K_F1 175.38 44.61 19125 7719.1 27509 25056 41648 41600 31061 39778 35172 21797 34318 45441 30222 30847 35169 14204 45760 44021 17693 7225.4 27439 24065 41804 40731 32083 40250 35515 23715 35159 44498 31256 31426 36137 16280 43669 41502 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36574000 21571 2337;3778;3779 20202 40748;40749 32724 32724 1 9606 Homo sapiens -0.010891641473904201 QLQEEDRGIDR Unmodified 1357.6586 0.65860571 4252 Q8NE86-3;Q8NE86;S4R468;Q8NE86-2 MCU Calcium uniporter protein, mitochondrial yes no 0 0 1 1 0 1 33.533 33.533 3 0.00039648 7406 20230619_1880_Aki_TMTPro18x_K_F1 103.46 77.344 20375 16425 21843 19729 24770 29889 27648 30342 31593 26829 32706 25941 28173 21988 26314 25926 29690 24988 18850 15066 22105 19796 25592 29452 27838 30846 31978 27279 33257 26270 28795 23029 26973 25943 28342 23761 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34191000 21572 4252 20203 40750 32725 32725 1 9606 Homo sapiens -0.005917252524795913 QLQEERPELSESELTR Unmodified 1942.9596 0.95959833 2929 E9PKP7;P17480-2;P17480;A0A994J4N4;A8K962;O00164;B4DLB0;E9PLT2 UBTF Nucleolar transcription factor 1 yes no 0 0 1 1.5 0.5 1 1 43.974 44.015 3 3.9434999999999995E-19 11654 20230619_1881_Aki_TMTPro18x_K_F2 200.77 172.91 121440 86846 103350 125940 137930 157870 140350 148190 153360 128240 135250 154370 150080 139840 131310 134540 155740 152180 112070 79863 107170 124320 140680 156910 141760 151500 154740 131510 140400 154970 151920 144400 135210 136300 148750 144370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 319480000 21573 2929 20204 40751;40752 32726 32726 1 9606 Homo sapiens 0.025836918166532996 QLQEIFENYK Unmodified 1310.6507 0.65066678 3440 P12270;P12270-2;Q58F23;Q504U6;A0PJC9 TPR Nucleoprotein TPR yes no 0 0 0 7.5 0.5 1 1 61.536 61.57 3 0.0033793 18518 20230619_1887_Aki_TMTPro18x_K_F7 61.213 30.027 67580 62913 65615 56120 58417 68926 69805 56519 83406 56354 54555 64666 57804 52080 64818 73263 70245 91743 62528 57534 66658 57472 61609 68485 70107 58638 82970 57284 57570 64842 59275 55273 66142 74272 67306 86863 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228940000 21574 3440 20205 40753;40754 32727 32727 1 9606 Homo sapiens 0.007767474980255429 QLQEQIR Unmodified 913.49813 0.49812931 2506 B4DJP6;M0R2H5;B4DJM9;M0QWZ7;Q9NP81;Q9NP81-2;B4DXB9;M0R2C6 SARS2 Serine--tRNA ligase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 36.751 36.802 2 0.052567 8184 20230619_1883_Aki_TMTPro18x_K_F4 85.064 20.026 58384 36225 60491 57017 68960 81579 78246 68790 85037 64149 88612 71652 81513 69615 71240 43390 75873 57253 53921 33368 61400 56168 71239 80285 78538 71045 86268 65372 90311 72338 82914 70509 72710 44920 72421 54300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43895000 21575 2506 20206 40755;40756 32728 32728 1 9606 Homo sapiens 0.03792016611942017 QLQGFPFYGK Unmodified 1183.6026 0.60259438 3412 P08579;B5BTZ8;Q86YK2 SNRPB2 U2 small nuclear ribonucleoprotein B'' yes no 0 0 0 4 0 1 60.341 60.343 3 0.052108 18429 20230619_1883_Aki_TMTPro18x_K_F4 45.908 31.218 119960 103060 111550 128900 101430 128410 128950 125570 133030 148950 129150 138550 155230 120080 133420 160070 144410 153480 110890 94551 114000 128030 107020 129790 128560 129130 135270 148930 133900 140470 156490 126650 136810 159760 138130 145810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202610000 21576 3412 20207 40757 32729 32729 1 9606 Homo sapiens 0.01813718368634909 QLQGHLGEIR Unmodified 1149.6255 0.62545508 3944 Q15834 CCDC85B Coiled-coil domain-containing protein 85B yes yes 0 0 0 6 0 1 38.258 38.334 3 1.5863E-06 8851 20230619_1886_Aki_TMTPro18x_K_F6 167.93 107.17 63234 45987 64208 61167 74116 86203 66169 66878 97547 70719 71482 57591 82239 57917 68003 81862 77114 86993 58438 42245 65273 60838 76082 84801 68139 69734 96508 70958 74922 59161 82853 61086 69982 82110 73762 82536 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84677000 21577 3944 20208 40758 32730 32730 1 9606 Homo sapiens 0.05662737486136393 QLQGHMWR Unmodified 1054.5131 0.51306786 4174 Q7Z508;Q9UHY7;D6RA00 ENOPH1 Enolase-phosphatase E1 yes no 0 0 0 2.5 0.5 1 1 37.57 37.627 3 4.8874E-05 8751 20230619_1881_Aki_TMTPro18x_K_F2 151.29 123.28 40543 28820 38737 40082 46468 52286 45876 40149 52683 49038 56483 50964 53612 45693 42806 49936 60827 45611 37444 26491 39627 39694 47657 51657 46491 42106 53424 49168 57592 51485 54310 47523 44745 49860 57919 43423 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39276000 21578 4174 20209 40759;40760 32731 32731 1 9606 Homo sapiens -0.012008147917185852 QLQGHVVDGHK Unmodified 1216.6313 0.63126874 4737 Q9Y4C8;A0A024RBL4 RBM19 Probable RNA-binding protein 19 yes no 0 0 0 6.5 0.5 1 1 33.251 33.315 4 2.2349E-06 6968 20230619_1886_Aki_TMTPro18x_K_F6 158.04 126.61 47300 31228 51308 47820 61470 66425 54828 57174 73739 69211 76695 75698 79709 66028 59089 67028 75899 77343 43715 28746 51915 47156 62878 65527 56267 59345 74170 69522 78639 76205 80269 68505 61418 67902 72468 73347 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53934000 21579 4737 20210 40761;40762 32732 32732 1 9606 Homo sapiens 0.031618359977983346 QLQLAQEAAQK Unmodified 1226.6619 0.66190017 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 0 7 0 1 48.352 48.439 2 0.0046138 12866 20230619_1887_Aki_TMTPro18x_K_F7 90.629 66.294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21580 3921 20211 40763 32733 32733 1 9606 Homo sapiens 0.05763569592159001 QLQLEAEEQRK Unmodified 1370.7154 0.7153923 4224 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 1 3.5 0.5 1 1 41.128 41.179 3 4.3351E-09 10045 20230619_1883_Aki_TMTPro18x_K_F4 179.98 131.99 293620 236470 266420 268730 333530 331160 324120 323050 412230 328690 389920 376250 390450 331290 353990 406490 396390 372200 271270 216800 273880 269660 340780 330090 330020 330700 413780 333510 400990 378510 396780 347090 363220 405240 378680 353970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 277260000 21581 4224 20212 40764;40765 32734;32735 32735 2 9606 Homo sapiens 0.04486322304001078 QLQNISLAAASGGAK Unmodified 1427.7732 0.77324153 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;Q6P2H7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2.5 0.5 1 1 52.528 52.574 3 0.00087827 15611 20230619_1881_Aki_TMTPro18x_K_F2 76.82 55.262 58721 49583 64180 57829 49548 63712 65104 58142 66695 71392 75986 78917 79867 67906 95531 73911 86350 74743 54350 45461 64497 57828 53085 63842 64812 60164 68240 71666 77766 79376 82118 70723 96232 74306 82628 71025 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 614120000 21582 3881 20213 40766;40767 32736 32736 1 9606 Homo sapiens 0.07646584229451037 QLQQAQAAGAEQEVEK Unmodified 1726.8486 0.84859132 3568 Q6FHX6;P39748;B4DWZ4;P39748-2;F5H1Y3 FEN1 Flap endonuclease 1 yes no 0 0 0 3 0.816 1 1 1 44.369 44.436 3 2.5014E-19 11555 20230619_1882_Aki_TMTPro18x_K_F3 203.27 177.71 369310 298870 301010 331270 362330 389940 375050 377180 438350 443390 476510 444870 448000 369550 393010 503590 494890 420850 340950 273930 312560 332740 372010 389690 379380 387900 444550 444570 485560 449230 455530 390680 406830 498980 472010 400880 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1144500000 21583 3568 20214 40768;40769;40770 32737;32738;32739;32740 32738 4 9606 Homo sapiens 0.014240968992226044 QLQQVEER Unmodified 1028.5251 0.52507234 4160 Q7RTP6;J3KTB6;J3KRP8;J3QQT0 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes no 0 0 0 2 0 1 35.911 35.968 2 0.011833 8018 20230619_1881_Aki_TMTPro18x_K_F2 96.311 55.286 26291 11813 27694 31500 31564 34943 29548 31150 30969 26995 40090 41757 39908 34644 32789 21431 46862 43180 24253 10998 28095 30192 32420 34945 29974 31985 31805 27958 40698 41451 40408 35294 34174 23008 44676 40795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55124000 21584 4160 20215 40771 32741 32741 1 9606 Homo sapiens 0.011950804324669662 QLQSEQPQTAAAR Unmodified 1426.7165 0.71645494 472 B4E054;A0A024R7X3;B3KUZ7;A0A024R7U9;Q9UI12-2;Q9UI12;G3V126 ATP6V1H V-type proton ATPase subunit H yes no 0 0 0 4 0 1 34.202 34.253 3 6.7811E-09 7227 20230619_1883_Aki_TMTPro18x_K_F4 168.31 143.54 17925 11308 20521 19430 25234 28011 22660 22851 29259 23122 29931 29106 27778 22723 25696 17849 31526 26563 16570 10427 20694 19054 25774 27540 23204 23704 29434 23549 30574 29045 28316 23406 26440 18532 30073 25155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82412000 21585 472 20216 40772 32742 32742 1 9606 Homo sapiens 0.02016536672977054 QLRDELR Unmodified 928.50903 0.50902834 1158 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RR34;A0A994J4D5 GATAD2B Transcriptional repressor p66-beta yes no 0 0 1 3.5 0.5 1 1 33.864 33.923 3 0.0069508 7089 20230619_1883_Aki_TMTPro18x_K_F4 102.72 11.678 102930 73871 92762 104340 106340 115520 113040 111860 133400 102880 125120 107450 115620 92375 114220 124740 133260 98857 95030 67909 95353 102980 109590 115850 114200 114300 134280 104650 128230 108490 118220 97474 117260 123370 127080 94296 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60184000 21586 1158 20217 40773;40774 32743 32743 1 9606 Homo sapiens 0.04191418986226836 QLSAPPADPQLFHVAR Unmodified 1745.9213 0.92130275 2568 B4DPV7;P49589-3;E9PLP0 CARS Cysteine--tRNA ligase, cytoplasmic yes no 0 0 0 1 0 1 50.52 50.52 3 5.5252E-05 14603 20230619_1880_Aki_TMTPro18x_K_F1 74.786 49.464 17747 13710 17264 19016 17749 22716 18871 18922 25275 21818 19957 21114 20929 17243 20557 20284 23746 23888 16400 12597 17599 18807 18464 22590 19158 19670 25172 21884 20777 21324 21314 18086 21084 20537 22690 22651 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11909000 21587 2568 20218 40775 32744 32744 1 9606 Homo sapiens 0.07817895483299253 QLSAQSYGVTSSTAR Unmodified 1554.7638 0.76379906 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 1 0 1 41.774 41.774 3 1.5104E-05 10879 20230619_1880_Aki_TMTPro18x_K_F1 84.859 62.627 78199 56422 71600 86069 101210 110870 101760 100560 124730 82343 97686 98313 99347 91520 88518 96390 110090 109300 72204 51915 73828 84744 102830 109950 103220 102950 124540 84779 101570 98889 100910 94866 91433 97492 105120 103680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60893000 21588 68 20219 40776 32745 32745 1 9606 Homo sapiens 0.008607711532704343 QLSAWCGPSSEDSR Unmodified 1578.6733 0.67326949 4347 Q99575;Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 0 4 0 2 46.694 46.736 2 1.7354999999999998E-22 12476 20230619_1883_Aki_TMTPro18x_K_F4 240.6 174.3 35561 28748 29429 33947 26884 31447 27111 27164 31112 36900 31286 31250 46683 28753 29603 40994 39596 36605 32833 26366 30389 33820 28169 31898 27464 28318 31536 36594 32747 31901 46276 30441 31014 40716 37768 34825 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61197000 21589 4347 20220 40777;40778 32746;32747 32746 2 9606 Homo sapiens -0.09292021166652376 QLSDAISIIGREDFPQK Unmodified 1916.0003 0.0003409361 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DM67;P55060-2 CSE1L Exportin-2 yes no 0 0 1 8 0 1 61.392 61.421 3 1.7069E-10 18368 20230619_1888_Aki_TMTPro18x_K_F8 142.58 110.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21590 1462 20221 40779 32748 32748 1 9606 Homo sapiens 0.07898077926915903 QLSDIEER Unmodified 988.48254 0.48253882 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 0 1.5 0.5 1 1 40.826 40.863 2 0.00020842 10486 20230619_1880_Aki_TMTPro18x_K_F1 169.21 90.886 211050 166790 208310 195380 174750 178800 141540 126420 176260 233960 344080 337150 289050 289900 313790 287170 418000 371350 195090 152970 211150 194790 183260 181000 146010 135870 184310 233800 342700 335980 298270 300300 324220 293440 398610 351990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 374550000 21591 1958 20222 40780;40781 32749 32749 1 9606 Homo sapiens -0.012163146957618665 QLSFISPPTPQPK Unmodified 1438.782 0.78201531 2241 B4DLS8;Q53GV6;B2R791;O43395;B4DM28;O43395-3 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes no 0 0 0 3.33 0.471 2 1 56.808 56.813 3 5.1642E-05 17145 20230619_1882_Aki_TMTPro18x_K_F3 112.08 83.757 45600 39918 48493 50257 50039 56842 57216 55555 64182 44649 44997 43349 44961 36000 50598 41562 40878 41841 42206 36623 49061 49994 52051 56939 57475 56557 64166 45701 47079 43825 46136 37685 50766 41726 39213 39735 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12227000 21592 2241 20223 40782;40783;40784 32750;32751;32752 32751 3 9606 Homo sapiens 0.08017557865923663 QLSHPANFGPR Unmodified 1222.6207 0.62070406 1795 A0A8Q3SHU8;P82663 MRPS25 28S ribosomal protein S25, mitochondrial yes no 0 0 0 2 0 1 36 36.056 3 7.7608E-05 8118 20230619_1881_Aki_TMTPro18x_K_F2 122.77 103.15 37068 29388 37741 40879 60051 70718 52056 51052 52020 22765 28585 34941 34809 26301 34276 30035 38173 32452 34274 27000 38648 40695 60418 68755 52920 52750 51985 24954 30764 34638 35298 27620 35050 30275 36446 30818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42952000 21593 1795 20224 40785 32753 32753 1 9606 Homo sapiens 0.0182985334336081 QLSILVHPDK Unmodified 1148.6554 0.65535823 3321 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 0 4.5 3.5 1 1 49.442 49.478 3 6.9043E-05 14130 20230619_1880_Aki_TMTPro18x_K_F1 135.6 86.248 186020 146680 163450 188440 172030 199820 188850 184810 231080 198800 190800 206960 215510 178150 165710 230560 210160 228120 171800 134650 168200 186980 178650 200820 190710 190260 231390 200490 198800 208750 216830 187510 172210 230510 200780 216630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 239840000 21594 3321 20225 40786;40787 32754;32755 32754 2 9606 Homo sapiens 0.08697676431461332 QLSQALDTSNVMVK Unmodified 1532.7868 0.78684269 1616 Q27J81;Q27J81-2;A0A6Q8PHA2;A0A6Q8PH71;A0A6Q8PHG2;A0A6Q8PGN3;A0A6Q8PF44;A0A6Q8PH25;A0A6Q8PF29;A0A087X118;A0A6Q8PFW4;A0A6Q8PGC7;A0A6Q8PH63;A0A6Q8PGU8;A0A6Q8PH59;A0A6Q8PFN5;A0A6Q8PFB9;A0A6Q8PGY8;A0A6Q8PH52;Q27J81-3;A0A6Q8PGX4;A0A6Q8PFY4;A0A6Q8PG64;A0A6Q8PFJ1;A0A6Q8PF91 INF2 Inverted formin-2 yes no 0 0 0 1 0 1 56.103 56.103 3 0.052516 16879 20230619_1880_Aki_TMTPro18x_K_F1 52.484 37.512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21595 1616 20226 40788 32756 32756 1 9606 Homo sapiens 0.04176073946359793 QLSQQSDGDRDLQEHR Unmodified 1910.8831 0.88307935 4213 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 1 1.5 0.5 1 1 30.726 30.759 4 4.5093E-14 5988 20230619_1881_Aki_TMTPro18x_K_F2 174.95 150.76 5368 4047.3 5493.2 6878.8 6378.1 8150.5 6752.4 6546.7 7778.7 5204.8 6511.4 8514.9 7085 6530.6 8346.6 6703 8247.7 7549.9 4962.1 3728.6 5593.3 6722.7 6574.2 8100.7 6816.6 6767.1 7806.6 5437.9 6783.4 8421.6 7277 6806.6 8449.9 6787.1 7887.5 7164.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37635000 21596 4213 20227 40789;40790 32757 32757 1 9606 Homo sapiens -0.03592686959950697 QLSQSLLPAIVELAEDAK Unmodified 1924.0517 0.051707805 1860;2118 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6;A8K8B0;P30154;P30154-2;P30154-4;P30154-3;B7Z1G3;P30154-5;H0YDG7 PPP2R1A;PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform no no 0 0 0 7 0.707 1 2 1 66.63 66.658 2;3 1.0882E-23 21027 20230619_1886_Aki_TMTPro18x_K_F6 164.2 140.01 26716 22564 24556 25916 20866 23398 23374 23610 22990 27764 30346 31937 29162 21243 28096 33796 34616 34170 24692 20685 25074 25872 22036 23864 23432 24227 23753 27941 30750 31873 29731 22943 28980 33760 33055 32453 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 568120000 21597 1860;2118 20228 40791;40792;40793;40794 32758;32759;32760 32758 3 9606 Homo sapiens 0.12664401901020028 QLSSCLPNIVPK Unmodified 1354.7279 0.72787125 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 3 0 1 57.457 57.49 3 0.0011499 17404 20230619_1882_Aki_TMTPro18x_K_F3 86.772 71.201 41243 28035 34160 37413 34394 40073 40306 36209 39377 46056 45501 42564 46101 40516 40888 45299 44985 46509 38042 25762 35317 37038 35890 40224 40269 37534 40446 45906 46403 43300 46790 42117 41921 45503 43012 44156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68059000 21598 2863 20229 40795 32761 32761 1 9606 Homo sapiens 0.0646964244267565 QLSSGVSEIR Unmodified 1074.5669 0.56693715 3383 V9HW43;P04792;A0A6Q8PFK8;A0A6Q8PGK1;A0A6Q8PHJ6;B4DL87;A0A6Q8PFE7;A0A6Q8PF43;A0A6Q8PHA6;A0A6Q8PH65;A0A6Q8PGY2 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 0 0 0 5.5 1.12 1 1 1 1 41.286 41.36 2 2.1514E-09 10018 20230619_1885_Aki_TMTPro18x_K_F5 200.71 144.99 614810 500760 555790 689390 753550 819400 695770 663000 840360 915130 876740 1036200 1094200 842870 888070 998670 1115600 1060800 568030 459980 573280 681910 765760 815070 709210 695020 850340 915040 908290 1039100 1099600 884480 919770 1004300 1064900 1007100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1796499999.9999998 21599 3383 20230 40796;40797;40798;40799 32762;32763;32764 32763 3 9606 Homo sapiens 0.03263636120982483 QLSSSVTGLTNIEEENCQR Unmodified 2164.0066 0.0066248805 707 P46940;A4QPB0;A0A024RC65;A0A0J9YXZ5;Q6P1N4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 4 0.816 1 1 1 52.616 52.668 3 6.287000000000001E-25 15359 20230619_1882_Aki_TMTPro18x_K_F3 209.19 192.26 138280 99689 134230 146200 127070 152500 145810 139300 144520 172640 171970 175440 179950 154170 145090 168150 171140 193160 127740 91682 136670 143840 133130 153350 145950 144150 148540 172720 175490 177190 181750 160520 149720 170090 163650 183120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 367090000 21600 707 20231 40800;40801;40802 32765;32766 32765 2 9606 Homo sapiens -0.028818166944347468 QLSSVQEDR Unmodified 1060.5149 0.51490158 972 A0A0A6YYG7;Q6IBW4-2;Q6IBW4;Q6IBW4-4;E5RJN3;Q6IBW4-5 NCAPH2 Condensin-2 complex subunit H2 yes no 0 0 0 2 0 1 34.951 35.008 2 0.010183 7644 20230619_1881_Aki_TMTPro18x_K_F2 95.483 60.038 28805 16748 33376 33447 38379 44213 37878 38185 45968 33737 50651 54631 45882 39333 37555 25475 50491 44381 26622 15485 33605 32515 39467 43714 38478 39313 46488 34987 51550 53945 46588 40355 38975 26931 48142 41975 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 14109000 21601 972 20232 40803 32767;32768 32767 2 9606 Homo sapiens -0.012935272927734331 QLSVEPYSQEEAER Unmodified 1663.7689 0.76894402 3215 O00488 ZNF593 Zinc finger protein 593 yes yes 0 0 0 1 0 1 45.424 45.424 2 0.032944 12496 20230619_1880_Aki_TMTPro18x_K_F1 66.289 52.131 2857.4 2499 2925.5 2469.2 5366.2 2503.4 3230.4 3557.7 2739 4097.1 3847.6 2299.5 4512.4 3529.4 2073.3 2757 3499.8 3937 2643.9 2287.7 2995.1 2500.9 5294.4 2564.2 3368.3 3572.6 2873.1 4054.3 3910.7 2460.5 4466 3565.4 2233.6 2847.1 3337.8 3725.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12134000 21602 3215 20233 40804 32769 32769 1 9606 Homo sapiens -0.03638969774738143 QLTAHLQDVNR Unmodified 1293.6789 0.67894722 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;Q59F36;O95654 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 0 0 7 0 1 38.829 38.893 3 1.8651000000000001E-31 8799 20230619_1887_Aki_TMTPro18x_K_F7 253.54 205.11 93446 79016 95953 103430 112540 116570 124660 111810 137240 91443 102980 95106 103870 86971 115110 114780 117400 93922 86444 72531 97568 102600 115830 116770 125310 114060 137570 93714 107310 96217 106530 91419 116970 113750 112150 89515 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166480000 21603 1717 20234 40805 32770 32770 1 9606 Homo sapiens 0.0438549019797847 QLTAQQHAILVDLGR Unmodified 1661.9213 0.92130275 376 A0A024R637;O60343-2;O60343-3;O60343;A0A3B3IRT3;O60343-5;O60343-4 TBC1D4 TBC1 domain family member 4 yes no 0 0 0 1 0 1 51.747 51.747 3 1.8804E-10 15110 20230619_1880_Aki_TMTPro18x_K_F1 146.67 113.72 33503 32145 35366 33668 34436 43823 39710 37004 42005 39258 37537 41312 41029 31812 38045 42738 46014 46065 31027 29431 35757 34026 36020 43385 39802 38337 42490 39622 38907 41514 41613 33726 39203 42941 43949 43717 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26508000 21604 376 20235 40806 32771 32771 1 9606 Homo sapiens 0.11681895483297922 QLTDFHK Unmodified 887.45012 0.45011648 434 E9PFH4;B2R6H7;A0A024R794;Q9Y5L0-3;Q9Y5L0;B3KMX1;B3KM69;C9J7E5;Q9Y5L0-5;Q9Y5L0-1 TNPO3 Transportin-3 yes no 0 0 0 7.5 0.5 1 1 42.963 43.008 3 0.0046072 10500 20230619_1887_Aki_TMTPro18x_K_F7 115.49 56.89 124100 82127 112670 114850 132510 142900 148660 130680 163620 145960 168480 170580 160580 133630 132280 189010 191600 179270 114520 75518 115740 113640 136500 142070 149360 134800 165940 147470 172260 170880 162850 141970 138600 188320 182670 170420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77628000 21605 434 20236 40807;40808 32772 32772 1 9606 Homo sapiens 0.0018894269189786428 QLTEEDGVHSVIEENIK Unmodified 1938.9535 0.95345032 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8;B4DIG6;B4DWK9;B4DIW1;B4DK31 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 4.5 0.5 1 1 52.102 52.151 3 0.0097344 14890 20230619_1883_Aki_TMTPro18x_K_F4 62.658 50.866 117480 115680 135340 127380 122330 134880 151980 132400 116330 147800 157130 114400 122310 86583 184510 97610 93881 76612 108900 105950 135770 127850 128710 135810 150460 135880 122230 147420 157640 116750 128630 90892 181040 97049 90581 73053 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 175240000 21606 3833 20237 40809;40810 32773 32773 1 9606 Homo sapiens 0.021531735851567646 QLTEMLPSILNQLGADSLTSLR Unmodified 2399.273 0.27301032 3480 P20290;P20290-2;A0A7I2YQL2;A0A7I2V3T6;A0A7I2V5Y3;D6RDG3;H0Y9Y1 BTF3 Transcription factor BTF3 yes no 0 0 0 4 0 1 67.37 67.384 3 0.078523 21352 20230619_1883_Aki_TMTPro18x_K_F4 35.174 30.543 0 875.16 781.88 0 0 0 0 0 1341.3 854.07 1062.7 0 0 0 908.03 1180 953.36 0 0 791.86 712.36 0 0 0 0 0 1275.8 793.31 1049.9 0 0 0 911.28 1099.8 905.13 0 0 1 1 0 0 0 0 0 1 1 1 0 0 0 1 1 1 0 983120 21607 3480 20238 40811 32774 32774 1 9606 Homo sapiens 0.12934473815175807 QLTGGVDVER Unmodified 1072.5513 0.55128709 949 A0A0A0MSA7;A0A8I5QJH9;A0A804HJV5;A0A8J9G7U8;A0A8I5KT99;A0A0U1RQK7;Q59GJ0;A0A8I5KV92;O43432-4;O43432;O43432-3;B4DZE1;B4DH17 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes no 0 0 0 3 0 1 41.236 41.295 2 0.046949 10178 20230619_1882_Aki_TMTPro18x_K_F3 66.486 21.733 53349 36735 57652 55442 54342 63166 62817 58117 71320 63470 79176 86983 69278 68786 70453 69760 90248 87905 49314 33803 58151 54541 56952 63141 63118 59893 72428 64586 80491 86583 71162 71569 72707 71111 86141 83309 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36523000 21608 949 20239 40812 32775 32775 1 9606 Homo sapiens 0.017913496039454913 QLTLTQEALQSR Unmodified 1386.7467 0.74669243 1754 Q08378;A0A8I5KYV8;Q08378-2;A0A8I5KWY9;A0A8I5KSF0;A0A8I5KQH9;A0A8I5KXF8;A0A8I5QKX6;A0A8I5KTE5;A0A8I5KQ98;A0A8I5QJ69;A0A8I5KVX9;A0A8I5KSV3;A0A8I5QKK4;A0A8I5KU25;A0A8I5KW20;A0A8I5KQN2;Q08378-4 GOLGA3 Golgin subfamily A member 3 yes no 0 0 0 7 0 1 49.431 49.516 2 0.00018274 13357 20230619_1887_Aki_TMTPro18x_K_F7 138 115.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21609 1754 20240 40813 32776 32776 1 9606 Homo sapiens 0.06878895338127222 QLTPPEGSSK Unmodified 1042.5295 0.52948901 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 5.5 0.5 1 1 41.066 41.157 3 0.0019422 9970 20230619_1885_Aki_TMTPro18x_K_F5 85.958 48.767 140280 99709 159100 155990 197060 225820 181490 183260 211220 161720 202890 194170 185650 163530 195200 145660 198180 179610 129750 91779 160620 153730 201310 221950 184830 189550 212970 165700 207770 194590 190500 168750 198200 148760 189460 170310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94665000 21610 12 20241 40814;40815 32777;32778 32777 2 9606 Homo sapiens 0.009925448553985916 QLTQEMMTEK 2 Oxidation (M) 1269.5581 0.5580883 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 2 0 3 0 1 38.358 38.412 3 0.0022292 8937 20230619_1882_Aki_TMTPro18x_K_F3 76.843 62.153 12894 11100 12549 14771 16468 15552 13911 15181 19908 15118 17577 15385 16350 16092 15587 16133 21168 17332 11924 10191 12844 14621 16718 15664 14361 15531 19834 15304 18072 15641 16713 16571 16172 16279 20173 16463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6707300 21611 380 20242 40816 32779 32779 235;236 1 9606 Homo sapiens -0.06590841622005428 QLTQPETHFGR Unmodified 1312.6524 0.65239812 2457;2620 Q59FH4;H0Y5J4;B4DDU5;Q9UJU6-5;Q9UJU6;B4DKZ4;B4DXL9;Q9UJU6-2;Q9UJU6-3;B4DDD6;Q9UJU6-4;B4DUF9;Q9UJU6-6 DBNL Drebrin-like protein no no 0 0 0 6.5 0.5 1 1 38.034 38.104 3 2.4386E-17 8737 20230619_1886_Aki_TMTPro18x_K_F6 191.04 149.5 65135 48520 56684 64424 74971 79339 85618 87507 109460 76964 84156 83490 94400 76635 81231 96134 90924 82054 60130 44567 58621 63947 76734 79269 86391 88521 109040 78604 87969 84287 95390 80296 83446 95470 86840 78117 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166190000 21612 2457;2620 20243 40817;40818 32780;32781 32780 2 9606 Homo sapiens 0.008578013066198764 QLTVLSDQQK Unmodified 1158.6245 0.62445203 2146 A8KA19;O43592;A0A024RB67 XPOT Exportin-T yes no 0 0 0 7 0 1 48.417 48.504 3 3.0025E-05 12898 20230619_1887_Aki_TMTPro18x_K_F7 106.58 58.873 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21613 2146 20244 40819 32782 32782 1 9606 Homo sapiens 0.05148478326577788 QLTVQMMQNPQILAALQER 2 Oxidation (M) 2243.1402 0.14022201 661 P55209;F8VY35;H0YIV4;B7Z2V4;F5H4R6;F8W0J6;F8VUX1;A0A024RBB7;P55209-2;F8W020;F8VXI6;B7Z5H0;F8VVB5 NAP1L1 Nucleosome assembly protein 1-like 1 yes no 0 2 0 1 0 1 57.715 57.715 3 0.026928 17617 20230619_1880_Aki_TMTPro18x_K_F1 44.587 40.553 14020 15557 14912 16293 18032 12434 17072 17610 24388 20860 13733 16898 17048 19140 18990 17911 17998 13920 12999 14237 15120 16357 18407 13015 17488 17718 24020 20796 14766 17387 17424 19581 19213 17807 17202 13279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 303130000 21614 661 20245 40820 32783 32783 407;408 1 9606 Homo sapiens 0.06837750877593862 QLVAEAIHSGK Unmodified 1151.6299 0.62987176 879 A0A087X0M4;A0A8Q3WKX9;Q9BWU0;A0A087WWF4;A0A8Q3WLG9;B4DV74;A0A8Q3WKX3;A0A8Q3WKX1 SLC4A1AP Kanadaptin yes no 0 0 0 7.5 0.5 1 1 46.52 46.588 3 0.00041006 12121 20230619_1888_Aki_TMTPro18x_K_F8 96.591 45.985 76119 58533 75988 77657 79679 89129 85228 83890 101170 81824 87681 90422 100320 74897 82557 106910 107070 92230 70358 53757 77271 76998 82646 89121 86103 86016 101580 83102 91154 90930 101100 79479 85743 106030 102100 87811 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 263780000 21615 879 20246 40821;40822 32784 32784 1 9606 Homo sapiens 0.06012201909038595 QLVAEQVTYQR Unmodified 1333.699 0.69901396 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5;Q9BWF4 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 6 0 1 44.787 44.876 2 8.9453E-12 11641 20230619_1886_Aki_TMTPro18x_K_F6 222.3 194.09 127580 108300 121420 132370 111170 130100 129420 122570 132030 161670 178300 160340 180810 148450 147560 191800 187400 167240 117950 99342 123770 131670 116830 131560 129580 126830 136300 161210 180710 162550 182850 155810 153070 190540 178780 159180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 356630000 21616 2702 20247 40823 32785 32785 1 9606 Homo sapiens 0.04551241137937723 QLVARPDVVEMHDVTAQDPK Oxidation (M) 2263.1267 0.12668044 3850 Q13435;E9PPJ0;Q7Z3K9 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 1 1 4.5 0.5 1 1 43.515 43.577 4 5.9758E-11 11078 20230619_1883_Aki_TMTPro18x_K_F4 138.03 121.35 50862 39914 46558 64369 56992 58588 61936 55640 67803 57702 68607 61518 67120 54412 63035 64884 65835 67796 46985 36739 47918 62856 58478 59598 62319 57150 68729 58345 70243 62080 68335 56933 64336 65195 62977 64355 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184660000 21617 3850 20248 40824;40825 32786 32786 2528 1 9606 Homo sapiens 0.04564216369908536 QLVARPDVVEMHDVTAQDPK Unmodified 2247.1318 0.13176581 3850 Q13435;E9PPJ0;Q7Z3K9 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 1 5 0.816 1 1 1 47.486 47.553 4 1.4782999999999999E-22 12707 20230619_1885_Aki_TMTPro18x_K_F5 189.48 155.53 378670 305400 352280 376160 321030 410340 434650 406850 427530 448370 419550 421820 473330 379320 382670 488170 465970 455620 349910 280210 359860 374550 339350 412120 431410 417040 435830 450040 433180 428050 476990 398540 395890 486690 444960 433130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 451960000 21618 3850 20248 40826;40827;40828 32787;32788;32789 32788 3 9606 Homo sapiens 0.05808520232540104 QLVDTTVELANK Unmodified 1329.714 0.71399532 3309 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 6 0 1 56.645 56.717 3 2.0629E-07 16738 20230619_1886_Aki_TMTPro18x_K_F6 136.38 112.77 83680 72734 74863 76927 72720 88415 83968 83377 92892 93363 99586 89084 102440 79539 99703 110960 100630 101010 77340 66621 76773 77532 76097 88429 84306 85785 94402 93692 101930 90389 104270 84051 101550 110410 96277 96039 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1030399999.9999999 21619 3309 20249 40829 32790 32790 1 9606 Homo sapiens 0.06232688215300186 QLVEQVEQIQK Unmodified 1340.73 0.72997974 464 B2R8A2;A0A024R7M0;Q9BVK6 TMED9 Transmembrane emp24 domain-containing protein 9 yes no 0 0 0 5 0.816 1 1 1 54.378 54.42 3 1.722E-11 15780 20230619_1886_Aki_TMTPro18x_K_F6 167.11 8.5511 307620 246290 272300 295950 324850 399340 331890 349860 418420 360720 369280 385650 423100 333980 357390 418510 443580 449080 284140 225920 280550 296120 334010 394710 336880 360990 419350 364890 383610 388670 426920 350860 369660 420710 423620 426190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 649880000 21620 464 20250 40830;40831;40832 32791;32792;32793 32793 3 9606 Homo sapiens 0.07324394452189154 QLVHELDEAEYR Unmodified 1500.7209 0.72087161 1053 A0A384NQ35;A0A0K0K1L8;Q06323-3;Q06323;Q06323-2;Q6FHU3;Q86SZ9;H0YKK6 PSME1 Proteasome activator complex subunit 1 yes no 0 0 0 1.5 0.5 1 1 47.324 47.362 3 9.804E-08 13274 20230619_1880_Aki_TMTPro18x_K_F1 166.38 139.78 162680 140920 157060 173330 190620 211400 210910 182480 212320 180430 214960 204700 204820 171610 189500 175850 235140 211020 150430 129260 160650 172850 195850 210220 211430 188460 216180 183280 219930 205590 208650 178390 195390 178680 224370 200140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 809890000 21621 1053 20251 40833;40834 32794;32795 32794 2 9606 Homo sapiens -0.00945998904148837 QLVHSFTEGR Unmodified 1172.5938 0.5938206 1006 A0A0C4DGH0;B4DK26;A8K6Q6;Q5ZPR3;A8K9J6;Q5ZPR3-3;Q5ZPR3-4 CD276 CD276 antigen yes no 0 0 0 7.67 0.471 1 2 40.3 40.315 2;3 1.1167E-05 9356 20230619_1887_Aki_TMTPro18x_K_F7 131.83 75.278 149270 98766 142080 140510 158590 169170 161460 163960 188090 177210 200270 192920 197930 153900 169060 184120 209780 211420 137810 90835 145160 138830 163500 168740 163490 168180 190560 178860 204710 193830 200630 161750 174750 186020 200340 200510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 395790000 21622 1006 20252 40835;40836;40837 32796;32797 32796 2 9606 Homo sapiens 0.014427447321850195 QLVLETLYALTSSTK Unmodified 1665.9189 0.91890272 3295 O75165;B3KN02 DNAJC13 DnaJ homolog subfamily C member 13 yes no 0 0 0 5.5 0.5 1 1 66.644 66.687 3 6.7365E-07 20838 20230619_1885_Aki_TMTPro18x_K_F5 120.92 94.805 18883 11498 15489 17292 18515 17737 19753 18827 18447 18338 21628 19112 21167 18943 21231 19461 21838 21378 17406 10586 16071 16987 19005 17927 19804 19149 18992 18582 22009 19374 21625 19573 21611 19664 20885 20286 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21920000 21623 3295 20253 40838;40839 32798;32799 32798 2 9606 Homo sapiens 0.11258002234967535 QLVMNHMHHEDQQVR Unmodified 1900.8785 0.87846844 472 B4E054;A0A024R7X3;B3KUZ7;A0A024R7U9;Q9UI12-2;Q9UI12;G3V126 ATP6V1H V-type proton ATPase subunit H yes no 0 0 0 5 0 1 32.076 32.155 5 0.0002971 6489 20230619_1885_Aki_TMTPro18x_K_F5 71.692 64.964 15268 11010 13694 18605 16170 17610 18144 17907 20065 17456 20398 21554 24973 17917 16008 18056 24337 22077 14096 10144 14110 18134 16655 17879 18236 18270 20338 17792 21109 21566 24900 18629 16904 18363 23190 20934 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13056000 21624 472 20254 40840 32800 32800 1 9606 Homo sapiens -0.03593565908090568 QLVTNACLIK Unmodified 1158.6431 0.64307898 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3S6H7G3;A0A3Q8ATF5;Q5U8W9;A0A3Q8APW9;A0A3Q8B022;A0A3Q8APX7;A0A3S6H7Z6;A0A3Q8AIR8;A0A3S6H7Y4;A0A3Q8B027;B4DJ87;E9PIX6;A0A3S6H765;A0A3Q8BCJ2;A0A3S6H8A6;A0A3Q8BCI7;A0A3S6H824;A0A3S6H950;A0A3S6H942;A0A3S6H7K8;A0A3Q8AIS2;A0A3Q8APY3;A0A3S6H960;A0A3Q8B4M4;A0A3Q8AIS5;A0A3Q8B9M1;A0A3S6H8W3;A0A3S6H7E4;A0A3S6H7Y8 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 yes no 0 0 0 2.67 0.471 1 2 52.92 52.971 2;3 6.8312E-05 15468 20230619_1882_Aki_TMTPro18x_K_F3 157.95 85.398 251680 193950 235600 235520 228350 278110 255860 242920 265430 222340 204820 184480 212700 158680 230830 244820 223180 189530 232520 177950 240580 235010 238710 277130 256680 250070 267400 224740 213310 188310 217570 169140 234050 241500 213380 180730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 663640000 21625 1536 20255 40841;40842;40843 32801;32802;32803 32803 3 9606 Homo sapiens 0.07010316696755581 QLWWGHR Unmodified 981.49332 0.4933187 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32;H0Y426 VARS Valine--tRNA ligase yes no 0 0 0 4.5 0.5 1 1 45.016 45.077 3 0.0016573 11668 20230619_1885_Aki_TMTPro18x_K_F5 128.75 108.23 96018 83473 85417 104610 103020 127140 121360 119830 135720 134970 130920 133770 143110 114850 128350 141580 127730 141100 88739 76579 88071 104170 106240 126640 121700 123310 137300 135560 135110 135200 144910 120550 130820 141780 122310 133980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 192700000 21626 725 20256 40844;40845 32804;32805 32805 2 9606 Homo sapiens 0.0018317725983933997 QLYETTDTTTR Unmodified 1327.6256 0.62557424 2083 A8K607;Q9UIA9;E7ESC6;H0YBE1 XPO7 Exportin-7 yes no 0 0 0 3 0 1 39.264 39.319 2 2.7344E-23 9305 20230619_1882_Aki_TMTPro18x_K_F3 260.98 230.73 61275 45861 54984 55397 65634 77843 67875 66459 87212 76176 92383 99424 97436 78598 76451 93730 107800 100390 56581 42082 56552 55456 67481 76736 68897 68935 87912 77201 94779 99167 98285 82573 79930 94270 102790 95310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56500000 21627 2083 20257 40846 32806 32806 1 9606 Homo sapiens -0.025133520952067556 QLYHLGVVEAYSGLTK Unmodified 1776.941 0.94103514 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 2 0 1 58.076 58.091 4 9.3686E-09 17866 20230619_1881_Aki_TMTPro18x_K_F2 142.91 119.11 40000 31430 39802 50717 36903 45315 49111 45341 47939 51902 47548 52747 51956 43791 47305 64169 50275 56059 36976 28930 40484 49522 38907 46198 48768 46524 48919 52113 49039 53210 52667 46533 48447 63649 48114 53310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118870000 21628 3811 20258 40847 32807 32807 1 9606 Homo sapiens 0.08364226703429267 QLYLPMLFK Unmodified 1151.6413 0.64128807 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;A0A7I2YQX3;B3KWD0;C9JKM9 XPO1 Exportin-1 yes no 0 0 0 6 0 1 64.371 64.417 2 0.0040599 20104 20230619_1886_Aki_TMTPro18x_K_F6 95.909 70.692 55912 47029 48598 51399 43627 72394 57515 57556 70807 25246 24998 26128 24724 23285 38118 27867 26352 30401 51653 43094 49953 51827 46312 71207 57564 58958 69392 27372 27834 26419 25908 24350 37821 28105 25355 28833 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18501000 21629 3228 20259 40848 32808 32808 1 9606 Homo sapiens 0.07153307678822785 QLYNIYAK Unmodified 1011.5389 0.53893149 3952 Q16740;M0R208 CLPP ATP-dependent Clp protease proteolytic subunit, mitochondrial;ATP-dependent Clp protease proteolytic subunit yes no 0 0 0 3 0 1 52.278 52.344 2 0.0017083 15176 20230619_1882_Aki_TMTPro18x_K_F3 138.33 108.52 107360 92027 97488 105250 101050 126620 122590 116190 131010 108170 104520 99834 108990 84236 101350 120390 115960 93026 99230 84356 99987 105500 105390 126150 122580 119210 131880 109540 108660 101260 110710 89319 104100 118820 110650 88730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44842000 21630 3952 20260 40849 32809 32809 1 9606 Homo sapiens 0.03362357931553106 QLYTVTMDVHSR Oxidation (M) 1464.7031 0.70311306 4491;3802 Q05CW7;E9PMU0;Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 no no 0 1 0 7 0 1 40.97 41.037 3 0.023313 9724 20230619_1887_Aki_TMTPro18x_K_F7 52.101 39.741 45464 33631 41550 37822 46205 50648 50513 47727 75999 45924 51684 52668 48999 46525 47093 47284 54462 54223 41984 30840 42584 38042 47794 50182 51433 48908 74898 46787 54054 52948 50055 48219 48328 47899 52036 51429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45445000 21631 3802;4491 20261 40850 32810 32810 2480 1 9606 Homo sapiens -0.01065037430657867 QLYTVTMDVHSR Unmodified 1448.7082 0.70819844 4491;3802 Q05CW7;E9PMU0;Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 no no 0 0 0 8 0 1 45.45 45.478 3 1.1038E-09 11706 20230619_1888_Aki_TMTPro18x_K_F8 137.31 116.36 71545 52013 67666 65977 69667 83433 75978 67901 103840 62474 76268 70444 82351 53993 71192 71537 77295 72785 66080 47757 69089 65707 72484 82664 77064 70324 102950 63770 79759 70643 83228 57237 72924 71676 73865 69135 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84110000 21632 3802;4491 20261 40851 32811 32811 1 9606 Homo sapiens 0.001792664319737014 QLYVLGHEAMK Unmodified 1287.6645 0.66454271 134 A0A024R1A3;P22314-2;P22314;Q5JRR9;Q5JRS0;Q5JRS2;Q5JRS1;Q5JRS3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 3.67 3.09 1 1 1 49.981 50.026 3 2.8295E-10 14359 20230619_1880_Aki_TMTPro18x_K_F1 193.23 139.9 577800 486780 555960 626240 554830 701740 634120 653400 752140 771500 756380 767380 851540 694550 720540 828680 824410 869280 534210 446750 567120 621830 579410 702490 638540 673930 760060 773280 780000 776720 859700 726210 741330 832560 788090 825050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 857470000 21633 134 20262 40852;40853;40854 32812;32813;32814 32812 3 9606 Homo sapiens 0.032217017254879465 QLYVLGHEAMK Oxidation (M) 1303.6595 0.65945733 134 A0A024R1A3;P22314-2;P22314;Q5JRR9;Q5JRS0;Q5JRS2;Q5JRS1;Q5JRS3 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 1 0 7.5 0.5 1 1 46.282 46.345 3 0.00048806 12021 20230619_1888_Aki_TMTPro18x_K_F8 94.402 75.657 232240 183180 198320 233950 254980 243740 250470 233550 265720 263840 287960 284790 293980 241400 265920 301570 290310 290140 214440 168150 205300 232170 260010 245600 253240 240200 270780 265650 294640 286760 298450 253630 272440 301350 277530 275690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 603900000 21634 134 20262 40855;40856 32815 32815 55 1 9606 Homo sapiens 0.019773978628563782 QMAEIAVNAVLTVADMER Unmodified 1959.9758 0.97578244 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 7.5 0.5 1 1 67.129 67.15 3 1.408E-09 20775 20230619_1888_Aki_TMTPro18x_K_F8 131.67 115 7093.6 7072.8 6009.6 7613.1 7736.5 5704.8 6595.1 9847.5 8282.9 7094.1 7551.1 6978.9 7752 6709 10096 9344.8 9006.7 8238.3 6559.9 6476.5 6225.9 7625.2 7851.7 6018.2 6776.3 9691.3 8312.6 7308.9 7792.5 7091.8 8017.6 7066.9 10161 9288.9 8622.7 7839.3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22381000 21635 2633 20263 40857;40858 32816;32817 32817 2 9606 Homo sapiens 0.03419358457540511 QMAEIAVNAVLTVADMER Oxidation (M) 1975.9707 0.97069707 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 1 0 8 0 1 65.679 65.698 3 0.002445 20246 20230619_1888_Aki_TMTPro18x_K_F8 69.122 56.289 4278.8 4014.5 4215.7 3418.9 4772.4 5586.5 6094.2 5474.3 5413.6 5455.8 5948.3 6433.8 7109.5 4526.9 4918.8 5700.8 5829.3 9551.3 3959.7 3670 4293.4 3536 4947.6 5483.9 6044.8 5598.3 5575.8 5542.3 6130.3 6420.5 7104.2 4808.2 5096.1 5920.5 5594.4 9017.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6071500 21636 2633 20263 40859 32818 32818 1587 1 9606 Homo sapiens 0.021750545949089428 QMAYENLNDKDQELGEYLAR Unmodified 2399.1063 0.10633893 3446 P13521;B4DQJ6 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 1 5 0 1 57.807 57.866 3 0.00091665 17020 20230619_1885_Aki_TMTPro18x_K_F5 75.55 67.928 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21637 3446 20264 40860 32819 32819 1 9606 Homo sapiens -0.03724999080532143 QMEKDETVSDCSPHIANIGR Oxidation (M) 2302.0318 0.031793774 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;B1AK85;Q7L4N0 CAPZB F-actin-capping protein subunit beta yes no 0 1 1 4 0 1 40.435 40.478 4 1.329E-22 9762 20230619_1883_Aki_TMTPro18x_K_F4 192.12 180.06 56677 55066 75995 64389 75436 60447 80731 74391 44935 67863 67083 39499 44037 30413 74688 24303 31073 21537 52617 50465 75490 64272 78201 61819 80037 74863 48776 67974 66672 41094 47008 31407 72721 24544 30086 20520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54153000 21638 1434 20265 40861 32820 32820 918 1 9606 Homo sapiens -0.06714085163503114 QMEQISQFLQAAER Oxidation (M) 1693.8094 0.80936904 1438 A0A384MTL2;P37802;P37802-2;X6RJP6 TAGLN2 Transgelin-2 yes no 0 1 0 5.5 0.5 1 1 58.236 58.299 3 1.0226E-08 17344 20230619_1886_Aki_TMTPro18x_K_F6 149.35 137.73 70671 64829 80571 69060 72319 87504 83334 79586 80265 81709 80152 72730 80789 76890 73672 104570 85432 77061 65473 59373 80842 69693 76073 86908 83320 81897 81966 82204 82229 74475 82167 80567 75862 103010 81569 73515 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 369800000 21639 1438 20266 40862;40863 32821;32822 32821 928 2 9606 Homo sapiens -0.00978326655967976 QMEQISQFLQAAER Unmodified 1677.8145 0.81445442 1438 A0A384MTL2;P37802;P37802-2;X6RJP6 TAGLN2 Transgelin-2 yes no 0 0 0 7 0 1 62.837 62.872 3 2.6554E-22 19132 20230619_1887_Aki_TMTPro18x_K_F7 230.26 209.88 1683400 1246100 1217400 1416300 1116300 1258900 1445100 1429400 1484600 1857100 1472700 1462000 1912200 1483300 1534700 1878000 1515300 1393600 1552100 1142800 1275200 1414700 1177500 1289300 1439300 1459900 1512500 1841100 1530700 1502700 1918500 1550500 1568000 1853100 1449200 1329200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6807199999.999999 21640 1438 20266 40864 32823;32824 32823 2 9606 Homo sapiens 0.00265977206640855 QMEVAQANR Unmodified 1045.4975 0.49747738 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6AWB1;Q6AWB3;Q59F36;H8Y0Y3 DCTN1;DKFZp686E0752;DKFZp686E191;DCTN1/ALK fusion Dynactin subunit 1 yes no 0 0 0 3.5 0.5 1 1 33.553 33.607 2 0.00078841 6958 20230619_1883_Aki_TMTPro18x_K_F4 123.35 91 17741 9120.7 21989 24084 31446 35381 23230 31672 30258 19647 25929 30866 27164 24670 30699 15204 37492 30455 16399 8482.4 22136 23205 31702 34795 24137 32264 30226 20855 26905 30586 27874 25160 31436 16339 35758 28791 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10096000 21641 1717 20267 40865;40866 32825;32826 32826 2 9606 Homo sapiens -0.02345146099401063 QMFGNADMNTFPTFK Oxidation (M) 1763.7647 0.76472704 3476 Q6IB54;P18859;P18859-2;A8MUH2 ATP5J ATP synthase-coupling factor 6, mitochondrial yes no 0 1 0 2 0 1 60.189 60.2 3 1.508E-05 18706 20230619_1881_Aki_TMTPro18x_K_F2 105.46 93.986 29368 29536 34719 33536 33713 33571 39947 36769 46226 35610 37774 38979 43391 36008 43777 42443 41237 45264 27235 27058 34802 33560 35223 34036 40100 37325 46369 36174 39420 39328 44119 37590 44361 42712 39508 42948 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56318000 21642 3476 20268 40867 32827 32827 2123 1 9606 Homo sapiens -0.08660473793725032 QMFGQFGK Unmodified 941.44292 0.44292261 894 O43251-4;O43251-10;O43251-5;Q9NWB1-3;F8VZG9;A0A8Q3WKT3;Q9NWB1-2;F8WSN4;J3KNW3;B0QYY4;B7ZLH9;B7Z1U7;I3L1D4;A0A6Q8PH77;A0A087X2B1;A0A804HJM2;A0A994J531;A0A0G2JRA5;X5DNY3;A0A8Q3SI58;X5D7T5;X5DP44;O43251-2;A0A6Q8PFM4;O43251-7;Q8TCM0;S4R469;A0A804HKG7;A0A6Q8PHA3;A0A6Q8PGE0;B0QYV1;F8VZY7;A0A286YEU2;F8VR27;O43251-6;O43251-8;Q59HD3;O43251-9;Q9NWB1;Q9NWB1-5;Q9NWB1-4;O43251;A0A8Q3SI75;A0A8Q3SI19;A0A0G2JSB3;J3QRF4;A0A8I5KWJ3;A6NFN3-2;A6NFN3;A0A3B3ITL7;B0QYY7;A0A8Q3SI31;A0A8Q3SI20;J3QQZ2 RBFOX2;RBFOX1;A2BP1;DKFZp547L059;RBFOX3 RNA binding protein fox-1 homolog 2;RNA binding protein fox-1 homolog 1;RNA binding protein fox-1 homolog;RNA binding protein fox-1 homolog 3 yes no 0 0 0 3 0 1 53.414 53.466 2 0.0042447 15698 20230619_1882_Aki_TMTPro18x_K_F3 117.02 82.941 131820 114780 135100 132130 114770 168620 157480 159010 187990 162520 176060 158470 162750 142250 151800 178100 172570 175600 121970 105210 136710 132530 122320 167420 157250 163150 189170 164000 180480 160620 166050 149160 155850 178180 164930 166800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86434000 21643 894 20269 40868 32828 32828 1 9606 Homo sapiens -0.03014113180165623 QMGDLLPPTIYIPYLK Unmodified 1861.0059 0.0059435859 4301 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 0 4 0 1 65.442 65.453 3 0.095594 20620 20230619_1883_Aki_TMTPro18x_K_F4 34.277 13.026 6332.5 5776.5 4605.9 5277.5 5101.2 5505.6 4514.6 5128.9 6276.9 5072.8 6278.3 5574.9 6984.8 6768.4 7764.2 6030.1 9563.4 8780.6 5846.4 5284 4832.3 5377.7 5251.2 5546.5 4643.4 5263.8 6291.1 5150.3 6470.1 5681.9 7151.7 6904.9 7970 6230.8 9127.4 8313.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8403500 21644 4301 20270 40869 32829 32829 1 9606 Homo sapiens 0.10988085185067575 QMGSGDAYPHQYSLK Unmodified 1680.7566 0.75660519 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 7.5 0.5 1 1 44.528 44.579 3 7.965E-08 11331 20230619_1888_Aki_TMTPro18x_K_F8 133.47 126.74 21588 21164 29601 21424 20831 25392 25582 24717 25432 24978 26200 25879 23740 19027 21117 25219 24422 23136 20048 19371 29224 21699 22450 25365 25535 25304 25945 25250 26734 26000 24176 20181 21725 25116 23326 22002 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33751000 21645 1552 20271 40870;40871 32830 32830 1 9606 Homo sapiens -0.05654284718798408 QMLPIVLK Unmodified 940.57796 0.57795953 2118 A8K8B0;P30154;P30154-2;P30154-4;P30154-3;B7Z1G3;P30154-5;H0YDG7 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 4 0 1 61.018 61.021 2 0.012001 18737 20230619_1883_Aki_TMTPro18x_K_F4 98.997 32.739 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21646 2118 20272 40872 32831 32831 1 9606 Homo sapiens 0.10529366961588948 QMLPLNTNIR Unmodified 1198.6492 0.64922699 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;A0A7I2YQX3;C9JKM9 XPO1 Exportin-1 yes no 0 0 0 3 0 1 51.05 51.121 2 0.039914 14626 20230619_1882_Aki_TMTPro18x_K_F3 74.92 42.789 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21647 3228 20273 40873 32832 32832 1 9606 Homo sapiens 0.057848349282721756 QMLTAAHALAVDAK Unmodified 1438.7602 0.76023401 790 Q05397-7;E7ESA6;Q658W2;A0A059VC25;H0YBP1;A0A8Q3WLM4;Q05397;Q05397-5;Q59GN8;Q59GM6;Q05397-2;I6L996;E9PEI4;B4DH13;H0YBZ1;Q8N9D7;H0YB16;A0A024R9H6;Q05397-6;B4DWJ1;E5RHD8;E5RI03 PTK2;DKFZp666O0110;FAK Focal adhesion kinase 1 yes no 0 0 0 1 0 1 52.727 52.727 3 0.00079643 15471 20230619_1880_Aki_TMTPro18x_K_F1 84.41 66.546 66420 53058 59257 64719 56415 63812 67963 68504 73213 79744 71196 78199 83315 71148 77942 89031 86583 77558 61353 48678 60786 64401 59160 64706 68029 69961 74273 79923 73735 79201 84406 74552 79885 88515 82696 73819 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46684000 21648 790 20274 40874 32833 32833 1 9606 Homo sapiens 0.058404298456935066 QMNPHIR Oxidation (M) 910.44432 0.4443196 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 1 0 6.4 1.02 1 2 1 1 25.042 25.101 3 0.016538 3836 20230619_1886_Aki_TMTPro18x_K_F6 74.415 54.938 74751 54846 72763 82157 98081 92063 80118 96519 104900 75996 86127 89224 78267 67850 88379 66361 98036 78564 69060 50450 74489 80823 99312 92447 82621 97702 104640 78328 88947 89223 80639 70618 90090 67478 93572 74562 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 48346000 21649 134 20275 40875;40876;40877;40878;40879 32834;32835;32836 32834 56 3 9606 Homo sapiens -0.014484790914139012 QMQSSFTSSEQELER Oxidation (M) 1801.7789 0.77885678 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7;B3KWP6;B7Z6P3;G3V5P0 KTN1 Kinectin yes no 0 1 0 2 0 1 41.762 41.839 3 1.5153E-09 10661 20230619_1881_Aki_TMTPro18x_K_F2 145.39 119.83 49413 39203 38830 39424 49249 50453 62396 54326 57858 37113 44771 41480 42092 32543 45855 39530 44604 42335 45601 35906 40497 39976 50650 50293 61958 54782 58589 38585 46435 41642 43205 34250 46456 39791 42673 40188 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80996000 21650 380 20276 40880 32837 32837 237 1 9606 Homo sapiens -0.0899614983165975 QMQVLHPAAR Oxidation (M) 1165.6026 0.60261115 3622 P50991;A8K3C3;B7Z9L0;B7Z2Z8 CCT4 T-complex protein 1 subunit delta yes no 0 1 0 4.08 2.69 3 3 1 1 3 1 28.661 28.72 3 0.00044134 4894 20230619_1887_Aki_TMTPro18x_K_F7 98.048 71.086 81120 64196 87747 82730 101320 102120 97090 90640 105900 90266 107910 107630 94860 83944 109940 88839 121480 96540 75032 58932 88747 82211 103850 101550 98418 93366 107270 91799 110090 107660 97980 87612 111950 89711 115950 91704 10 11 11 10 10 10 11 10 10 11 11 11 11 11 10 11 11 11 568050000 21651 3622 20277 40881;40882;40883;40884;40885;40886;40887;40888;40889;40890;40891;40892 32838;32839;32840;32841;32842;32843;32844;32845;32846;32847;32848;32849 32848 2311 12 9606 Homo sapiens 0.026433950969931175 QMQVLHPAAR Unmodified 1149.6077 0.60769653 3622 P50991;A8K3C3;B7Z9L0;B7Z2Z8 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 2 0.816 1 1 1 34.885 34.924 3 1.6879E-14 7612 20230619_1881_Aki_TMTPro18x_K_F2 199.46 148 187320 158700 184820 172520 200160 229400 197550 198620 236350 193790 225830 206500 211540 184490 199880 209850 483370 205790 173230 145410 188120 173920 206750 226970 200580 204870 238010 196610 231430 208420 216240 192340 219000 210250 457820 196520 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 573890000 21652 3622 20277 40893;40894;40895 32850;32851;32852 32851 3 9606 Homo sapiens 0.038876989596019484 QMREEDQEEAAK Oxidation (M) 1478.6307 0.63073598 3912 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog yes yes 0 1 1 1.5 0.5 1 1 30.011 30.045 3 0.0022936 6003 20230619_1880_Aki_TMTPro18x_K_F1 84.734 66.544 23003 11296 37638 34862 57094 60826 42148 59055 42845 28053 49298 48678 49930 41715 49128 17335 61298 45016 21329 10546 37290 33568 57300 59431 43440 59552 43807 30644 50309 48232 50899 42003 50450 19475 58419 42523 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37753000 21653 3912 20278 40896;40897 32853;32854 32853 2591 2 9606 Homo sapiens -0.08943416294869166 QMREEDQEEAAK Unmodified 1462.6358 0.63582135 3912 Q15050 RRS1 Ribosome biogenesis regulatory protein homolog yes yes 0 0 1 1 0 1 33.442 33.442 3 0.0031034 7381 20230619_1880_Aki_TMTPro18x_K_F1 74.392 45.094 12576 9374.6 18189 16246 16172 26731 14216 18042 16993 15179 19676 23129 21787 19054 18919 11073 24621 21055 11665 8639.1 17976 15964 16966 25997 14559 18943 17256 15743 20176 22953 22038 19375 19555 11844 23478 19905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13794000 21654 3912 20278 40898 32855 32855 1 9606 Homo sapiens -0.07699112432237598 QMSGAQIK Oxidation (M) 877.43275 0.43275186 3930;3929;2914 Q15365;Q53SS8;E9PFP8;P57721-4;P57721;J3QT27;Q5MJP6;P57721-2;P57721-3;P57721-5;Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DRD7;H3BSS4;F8VRH0 PCBP1;PCBP3;PCBP2 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 no no 0 1 0 7.5 0.5 1 1 34.812 34.846 2 0.020577 7244 20230619_1887_Aki_TMTPro18x_K_F7 82.75 40.152 77611 34492 97389 92321 153500 177650 115900 153250 123880 30223 46798 41861 37249 39039 88199 17370 59860 34337 71711 32117 98111 89474 154010 172400 119330 154770 122400 37635 51312 41962 40807 39201 86817 18996 57371 32528 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48702000 21655 3929;2914;3930 20279 40899;40900 32856 32856 1737 1 9606 Homo sapiens -0.01086720905391303 QMSGAQIK Unmodified 861.43784 0.43783723 3930;3929;2914 Q15365;Q53SS8;E9PFP8;P57721-4;P57721;J3QT27;Q5MJP6;P57721-2;P57721-3;P57721-5;Q15366-3;Q15366-6;Q15366-7;Q15366-2;Q15366;Q15366-4;A0A384N6B9;Q15366-5;Q15366-8;H3BRU6;F8VZX2;B4DRD7;H3BSS4;F8VRH0 PCBP1;PCBP3;PCBP2 Poly(rC)-binding protein 1;Poly(rC)-binding protein 3;Poly(rC)-binding protein 2 no no 0 0 0 8 0 1 40.176 40.165 3 0.0021664 9555 20230619_1888_Aki_TMTPro18x_K_F8 106.94 48.344 123270 62640 136140 145350 157860 200670 131420 159400 176340 81820 116690 107760 102270 93825 119200 72853 129160 92936 113820 58111 137620 140510 161800 197500 135500 163550 174380 87835 121870 107810 105720 96112 121180 74850 123240 88191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76983000 21656 3929;2914;3930 20279 40901 32857 32857 1 9606 Homo sapiens 0.0015758295721752802 QMVEHGGFYR Oxidation (M) 1238.5502 0.55024123 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 0 5.5 0.5 1 1 32.867 32.926 3 0.00067425 6821 20230619_1886_Aki_TMTPro18x_K_F6 94.692 68.573 37069 28169 33587 39072 42705 39163 42210 42678 51904 43846 51751 50120 51942 40596 49011 51915 53759 62190 34235 25884 34570 38555 43581 39689 42884 43393 52293 44448 53100 50297 52846 42820 50170 52548 51448 58929 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98072000 21657 3881 20280 40902;40903 32858;32859 32859 2557 2 9606 Homo sapiens -0.05949188036606756 QMVEHGGFYR Unmodified 1222.5553 0.55532661 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 7 0 1 37.56 37.625 3 4.8133E-08 8316 20230619_1887_Aki_TMTPro18x_K_F7 169.37 143.33 59593 41403 48965 49611 56448 62925 57810 63225 77028 69300 72276 71336 81853 58265 59565 86005 83652 80599 54970 38000 50741 49617 58144 62625 58810 64695 77190 69782 74757 71925 82126 62045 62436 85591 79783 76622 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112280000 21658 3881 20280 40904 32860 32860 1 9606 Homo sapiens -0.04704884173975188 QMVEILHK Oxidation (M) 1012.5376 0.53755128 1180 A0A140VJK1;O76003 GLRX3 Glutaredoxin-3 yes no 0 1 0 7.5 0.5 1 1 41.864 41.898 3 0.0037187 10013 20230619_1887_Aki_TMTPro18x_K_F7 91.584 34.855 64783 54663 54434 66285 73642 70990 71430 73315 86588 77019 83621 78198 77550 57352 71366 91138 74995 72379 59836 50137 56507 66043 74877 71514 72606 74829 87211 77673 85623 78682 78990 61639 72992 89933 71701 68954 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70334000 21659 1180 20281 40905;40906 32861 32861 724 1 9606 Homo sapiens 0.031784005711756436 QMVEILHK Unmodified 996.54264 0.54263666 1180 A0A140VJK1;O76003 GLRX3 Glutaredoxin-3 yes no 0 0 0 8 0 1 47.882 47.94 3 0.00070946 12635 20230619_1888_Aki_TMTPro18x_K_F8 125.56 55.61 180150 146780 173850 182410 170310 214770 193390 192820 230990 223230 217450 212780 244240 187800 212230 259430 244940 221870 166530 134680 177160 181700 178080 214140 194840 199290 232700 223700 224870 215730 246800 198380 218430 257310 233880 211220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357020000 21660 1180 20281 40907 32862 32862 1 9606 Homo sapiens 0.04422704433795843 QMVETELK Oxidation (M) 992.48485 0.48484701 3709 V9HW98;P62258;G9K389;G9K388;P62258-2;B4DJB0;K7EIT4 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 1 0 3.5 0.5 1 1 42.459 42.514 2 0.013623 10606 20230619_1883_Aki_TMTPro18x_K_F4 90.906 43.057 120310 88755 106730 119480 126400 133080 128000 120300 146910 137940 174800 177580 156850 138790 144190 165230 182230 180110 111070 81539 109920 118270 129780 133250 129550 124300 149620 139680 177250 177190 160110 145810 149070 166390 173980 170920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 256600000 21661 3709 20282 40908;40909 32863 32863 2394 1 9606 Homo sapiens -0.011696022823116436 QMVETELK Unmodified 976.48993 0.48993238 3709 V9HW98;P62258;G9K389;G9K388;P62258-2;B4DJB0;K7EIT4 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 0 0 3.5 0.5 1 1 47.111 47.171 3 0.00062584 12733 20230619_1883_Aki_TMTPro18x_K_F4 120.15 37.149 88044 65601 88124 78637 80058 94923 90150 79512 108190 110320 109120 114540 124490 105500 99663 129270 134560 125440 81367 60192 89339 78583 84139 94397 90875 83142 109280 110010 112600 115780 125420 110380 103860 129230 128340 119220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 425560000 21662 3709 20282 40910;40911 32864 32864 1 9606 Homo sapiens 0.0007470158029718732 QMVIDVLHPGK Oxidation (M) 1251.6645 0.66454271 1364 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4 RPS24 40S ribosomal protein S24 yes no 0 1 0 4.5 3.5 1 1 48.086 48.115 3;4 0.0005047 13584 20230619_1880_Aki_TMTPro18x_K_F1 94.191 67.077 120590 100420 116640 119060 125560 118310 129070 129620 127600 132120 132920 120820 159920 113550 124890 173600 144820 141750 111490 92086 118930 118750 129630 120030 129930 131700 130380 133020 137210 123080 160560 120620 128980 171550 138350 134980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 177350000 21663 1364 20283 40912;40913 32865;32866 32865 859 2 9606 Homo sapiens 0.04877701725490624 QMVIDVLHPGK Unmodified 1235.6696 0.66962808 1364 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4 RPS24 40S ribosomal protein S24 yes no 0 0 0 1.5 0.5 1 1 53.27 53.286 3 0.00023973 15855 20230619_1881_Aki_TMTPro18x_K_F2 95.498 65.691 651260 442670 611930 644740 463230 587450 569180 597870 626750 625680 560990 622100 783270 549010 504050 760540 743860 795450 601260 407190 622870 633620 496510 598240 569930 610940 633060 630660 588540 629300 778550 580590 532110 761940 709760 754960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2504500000 21664 1364 20283 40914;40915 32867;32868;32869 32869 3 9606 Homo sapiens 0.06122005588099455 QNAETASAVATR Unmodified 1217.6 0.60002819 2439 Q8NI08;Q8NI08-2;B3KXK4;H0UI55;Q86TE3;Q5TF96;Q5TF97;Q8NI08-4;Q8NI08-3;Q8NI08-6;Q5TF98 NCOA7;DKFZp451P0217 Nuclear receptor coactivator 7 yes no 0 0 0 3.5 0.5 1 1 32.279 32.348 2 0.012441 6474 20230619_1883_Aki_TMTPro18x_K_F4 91.245 62.502 9287.3 4406.7 11889 14508 10734 8402.5 10141 13860 12130 9633.1 17269 16375 14833 15001 13344 6597 19601 18293 8585.1 4121.7 11853 13724 11193 9074 10342 13673 12426 10163 17360 16265 15163 15079 13900 7443.2 18685 17256 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27934000 21665 2439 20284 40916;40917 32870 32870 1 9606 Homo sapiens -6.781826982660277E-05 QNAQCLHGDIAQSQR Unmodified 1724.8013 0.80126397 2610 B4DW97;Q9BQ39;B4DED6;Q9NTA9;K0J110 DDX50;DKFZp761E0323;mcdrh ATP-dependent RNA helicase DDX50 yes no 0 0 0 5 0.816 1 1 1 32.387 32.447 3 7.9639E-34 6546 20230619_1885_Aki_TMTPro18x_K_F5 262.42 240.19 30854 22989 21693 25792 27171 29112 26578 28028 31469 27090 29926 23843 33884 23963 23998 33616 37751 30190 28444 21081 22903 25863 27798 29170 26984 28676 31714 27341 30895 24401 33970 25247 25385 33403 35935 28738 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87733000 21666 2610 20285 40918;40919;40920 32871;32872 32871 2 9606 Homo sapiens -0.03214460852746015 QNCDQFEK Unmodified 1067.4342 0.43420842 2776 CON__P02769 yes yes 0 0 0 3.5 0.5 1 1 39.533 39.587 2 0.00067814 9409 20230619_1882_Aki_TMTPro18x_K_F3 175.51 130.88 + 27458 61593 161140 39027 675290 946060 94564 282110 390420 74665 121030 223570 61333 101410 137590 41728 187190 281930 26689 56099 159620 52633 647270 871800 138390 327160 369870 92286 134900 215660 68686 105530 140800 56569 179280 264890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137020000 21667 2776 20286 40921;40922 32873;32874 32873 2 9606 Homo sapiens -0.09681131607317184 QNDVFGEAEQ Unmodified 1135.4782 0.47818172 1080 A0A0S2Z3X8;P31150;B4DHX4;B4E070 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 1 0 1 48.487 48.487 2 5.681E-19 13758 20230619_1880_Aki_TMTPro18x_K_F1 243.29 220.27 138480 101850 134130 160830 122150 143200 128520 134250 161570 170170 167160 187820 195520 141910 150540 198260 207540 215480 127930 93751 136580 157230 128130 145860 130310 138790 163060 170550 172570 188250 196400 151010 157280 199120 198080 204450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280020000 21668 1080 20287 40923 32875 32875 1 9606 Homo sapiens -0.08413823909313578 QNEAAVGNCAEHMR Unmodified 1585.6726 0.67255799 1381 B2R5K5;A0A2U9EWT9;Q9BSY4;Q9BSY4-2 CHCHD5 Coiled-coil-helix-coiled-coil-helix domain-containing protein 5 yes no 0 0 0 2.5 0.5 1 1 32.492 32.558 3 9.2024E-05 6629 20230619_1882_Aki_TMTPro18x_K_F3 96.414 91.945 8268.1 3629.1 7039.6 6624.7 10759 7781.7 9531 9689.9 16508 9807.9 10875 12619 11054 10662 10209 11040 9585.1 11053 7613.7 3356.5 7302.1 6459 10833 7830.4 9887.4 9767.8 16177 10005 11439 12610 11246 11074 10367 11089 9187.2 10492 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10960000 21669 1381 20288 40924;40925 32876 32876 1 9606 Homo sapiens -0.09685139087378047 QNEDIEPTSSR Unmodified 1274.5739 0.57387302 2065 Q9NW82;A8K564;D6RIW8 WDR70 WD repeat-containing protein 70 yes no 0 0 0 1 0 1 32.91 32.91 2 6.7213E-06 7156 20230619_1880_Aki_TMTPro18x_K_F1 154.84 126.44 9953 6681.2 13236 12345 17436 23473 13202 15606 17122 12824 18554 24125 21372 17768 17308 7874.8 20192 18645 9218.1 6165.5 13234 12132 17697 22685 13689 16403 17265 13464 19125 23721 21525 18024 17775 8712.1 19281 17600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19328000 21670 2065 20289 40926 32877 32877 1 9606 Homo sapiens -0.05243095789091967 QNEEFRPFIR Unmodified 1334.6731 0.67313356 3238 Q5T094;Q9P0H9;O15258;Q5T092;A0A0A0MR06;Q5T091 RER1 Protein RER1 yes no 0 0 1 7 0 1 44.208 44.291 3 6.7126E-05 11008 20230619_1887_Aki_TMTPro18x_K_F7 139.15 89.709 101490 100260 106060 112180 109050 125070 135210 144100 140660 114490 131490 123170 125830 109480 121790 139860 131910 134090 94001 91841 107470 112540 113730 125930 134990 145060 142500 117560 135050 124300 128440 114960 124580 139690 126120 127410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176160000 21671 3238 20290 40927 32878 32878 1 9606 Homo sapiens 0.01918391686308496 QNEELNLLK Unmodified 1099.5873 0.58733824 380 A0A024R663;Q86UP2 KTN1 Kinectin yes no 0 0 0 4 0 1 52.569 52.593 3 0.079917 15171 20230619_1883_Aki_TMTPro18x_K_F4 51.436 6.7318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21672 380 20291 40928 32879 32879 1 9606 Homo sapiens 0.041528067808030755 QNFHMEQLK Oxidation (M) 1189.555 0.55499226 4016 Q58EY4;Q92922;B4DYQ1;B4DYF9 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 1 0 6 0 1 37.35 37.418 3 0.0005403 8515 20230619_1886_Aki_TMTPro18x_K_F6 105.98 82.655 73742 53785 69037 68932 89820 102910 82930 84433 104580 42540 44383 34580 37427 28832 56583 37431 42678 25380 68105 49388 70840 68800 91544 101030 84639 86385 102730 45125 48040 35340 39327 30386 56321 36873 40848 24298 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42377000 21673 4016 20292 40929 32880 32880 2655 1 9606 Homo sapiens -0.032203038938632744 QNFHMEQLK Unmodified 1173.5601 0.56007764 4016 Q58EY4;Q92922;B4DYQ1;B4DYF9 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 0 7.5 0.5 1 1 43.752 43.796 3 0.00020376 10818 20230619_1887_Aki_TMTPro18x_K_F7 125.75 89.787 186210 152350 167340 168450 185380 221630 197150 188550 251110 117100 112540 96304 105740 94308 143040 121590 128540 94507 172040 139640 171860 169530 191710 219290 199640 193000 246810 121850 121670 98794 110010 98747 143870 120320 122890 90175 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 70055000 21674 4016 20292 40930;40931 32881;32882;32883 32882 3 9606 Homo sapiens -0.01976000031231706 QNFIDPLQNLCEK Unmodified 1617.7821 0.78209166 4100 Q99961;Q9UQD4;Q6FGM0;Q99961-2;M0R0I3;M0QYE0 SH3GL1 Endophilin-A2 yes no 0 0 0 7 0 1 61.76 61.799 2 1.0805E-12 18587 20230619_1887_Aki_TMTPro18x_K_F7 176.42 152.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21675 4100 20293 40932 32884 32884 1 9606 Homo sapiens -0.002088101963408917 QNGDDPLLTYR Unmodified 1290.6204 0.62042929 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;P02545-4;P02545-5;Q5TCI8;B4DFR3 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 3 0.816 1 1 1 47.65 47.715 2 7.7547E-12 13049 20230619_1882_Aki_TMTPro18x_K_F3 199.59 163.03 62869 61587 61208 68690 70000 68486 87949 82934 69009 83489 84413 70057 88092 61426 91344 83871 76131 68872 58192 56415 62502 68817 72355 69641 87042 83740 72053 83873 85989 71503 89819 64888 91944 83114 72939 65600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 296940000 21676 1428 20294 40933;40934;40935 32885 32885 1 9606 Homo sapiens -0.013256111671580584 QNILYHLGEEWQK Unmodified 1656.826 0.82600539 2242 B2R7C2;O43264;O43264-2;B4E1J7;B4DUQ3 ZW10 Centromere/kinetochore protein zw10 homolog yes no 0 0 0 7.5 0.5 1 1 57.851 57.903 3 8.4525E-08 16946 20230619_1888_Aki_TMTPro18x_K_F8 148.89 124.33 60415 48359 59298 59595 54612 62204 69010 61268 74847 75191 69784 68954 71995 61145 63693 86925 75088 81524 55848 44372 60270 59308 57495 62683 68914 63048 75739 75058 71928 70043 73029 64695 65676 86558 71778 77466 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46019000 21677 2242 20295 40936;40937 32886 32886 1 9606 Homo sapiens 0.023865422922654034 QNINLSAPIMSR Oxidation (M) 1358.6976 0.69763375 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 1 0 1.5 0.5 1 1 45.985 46.025 2 0.00046933 12600 20230619_1881_Aki_TMTPro18x_K_F2 101.35 71.582 87688 79058 93443 93052 90323 106460 91849 104520 109240 120810 124220 116060 125020 115670 109800 140670 128660 127170 81178 72475 94395 93028 94168 106580 93141 107300 110970 121060 126710 118090 126920 120590 113130 140120 122910 120930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 241970000 21678 3892 20296 40938;40939 32887 32887 2572 1 9606 Homo sapiens 0.03263283777505421 QNKDDEAEWQELQQSIQR Unmodified 2244.0407 0.040702201 1136 B3KQF0;A0A0S2Z5M1;Q9UGP8 SEC63 Translocation protein SEC63 homolog yes no 0 0 1 2.5 0.5 1 1 53.316 53.358 3 5.3511000000000006E-24 15656 20230619_1882_Aki_TMTPro18x_K_F3 210.09 195.4 56174 45087 53904 60626 50601 61427 54383 54890 59625 64811 60854 57424 68123 53781 61417 70497 60653 61792 51919 41406 54939 59938 52975 61885 54802 56802 60546 64742 62677 58530 68943 56496 62580 70064 58047 58778 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 66293000 21679 1136 20297 40940;40941 32888;32889 32889 2 9606 Homo sapiens -0.0315565221126235 QNLAEMGLAVDPNR Oxidation (M) 1542.746 0.7460405 4722 Q9Y3C1;D6RIC3;A0A0C4DGU5;Q9Y3C1-3;Q9Y3C1-2;B4E098;D6RC60 NOP16 Nucleolar protein 16 yes no 0 1 0 4 0 1 46.596 46.64 2 0.087053 12443 20230619_1883_Aki_TMTPro18x_K_F4 62.466 47.691 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21680 4722 20298 40942 32890 32890 2880 1 9606 Homo sapiens -0.003622673732252224 QNLEIHR Unmodified 908.48281 0.48281359 1108 A0A0S2Z4W4;Q7Z3D7;P98175-2;P98175;P98175-5;A0A0S2Z4X1;P98175-4;P98175-3 DKFZp686E2459;RBM10 RNA-binding protein 10 no no 0 0 0 4.5 0.5 1 1 31.48 31.552 3 0.0017982 6117 20230619_1883_Aki_TMTPro18x_K_F4 133.6 79.395 47443 35150 39046 52636 49746 56185 51653 47022 75438 55171 71233 69017 68112 60341 49315 55150 72582 71089 43779 32331 40610 51715 50951 56315 52672 48924 75242 55805 73090 69133 68756 62261 51791 56387 69210 67357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61393000 21681 1108 20299 40943;40944 32891 32891 1 9606 Homo sapiens 0.024911498147503153 QNLFLGSLTSR Unmodified 1234.667 0.66698555 100 Q0VAB1;A0A024R0M6;Q3ZCQ8;Q3ZCQ8-2;Q3ZCQ8-3;M0R0C3;M0R2F8 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes no 0 0 0 5 0 1 56.757 56.818 2 0.00068747 16569 20230619_1885_Aki_TMTPro18x_K_F5 111.73 72.516 133400 106390 122530 154360 126930 154620 144720 143290 158690 168210 155850 171520 171180 156850 178140 186600 187600 190280 123250 97795 125650 151840 132120 156000 145320 147880 160870 168760 160870 173430 174650 163820 181590 187230 179420 180680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120790000 21682 100 20300 40945 32892 32892 1 9606 Homo sapiens 0.059038734547812055 QNLFQEAEEFLYR Unmodified 1685.8049 0.80493559 892 Q86SZ7;Q2TNB3;A0A087X1Z3;Q9UL46;Q6FHK9 PSME2 Proteasome activator complex subunit 2 yes no 0 0 0 5 0 1 65.346 65.39 3 3.6971E-08 20335 20230619_1885_Aki_TMTPro18x_K_F5 129.37 112.97 9241.3 8026.3 9406 9158.7 10018 11297 10974 10715 10319 11839 12754 15240 11836 11692 17112 14265 13288 14175 8549.7 7356.8 9550 9187.8 10380 11249 10993 11017 10653 12002 12961 15190 12366 12302 17082 14299 12757 13462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34652000 21683 892 20301 40946 32893 32893 1 9606 Homo sapiens -0.010534678072644965 QNLHEIGER Unmodified 1094.5469 0.54687041 2987 Q8NEY8-6;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;F8W0Q9 PPHLN1 yes no 0 0 0 2.5 0.5 1 1 31.311 31.386 3 0.00077631 6259 20230619_1881_Aki_TMTPro18x_K_F2 103.42 81.717 22106 15776 25615 23863 27032 31935 29676 27289 40396 26182 30349 34531 32284 24536 27732 29151 35104 32024 20451 14515 25745 23532 28061 31556 30086 28176 40094 26803 31718 34324 32664 25893 28692 29378 33495 30398 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54867000 21684 2987 20302 40947;40948 32894 32894 1 9606 Homo sapiens 0.003378851810339256 QNLHENLQGLGPGVR Unmodified 1630.854 0.85395147 48 A0A8V8TL27;A0A8V8TL18;A0A8V8TLG1;A0A8V8TL47;A0A024QZM5;A0A8V8TMP9;Q9ULE6 KIAA1274;PALD1 Paladin yes no 0 0 0 8 0 1 41.72 41.717 3 1.267E-07 10191 20230619_1888_Aki_TMTPro18x_K_F8 126.25 101.97 38207 30401 39601 38714 40255 40701 46202 40941 45576 47457 58599 49442 57688 46467 49786 56287 53508 50515 35333 27904 40116 38448 41872 41023 46225 42000 46975 47672 59403 50055 58503 48551 51006 56069 51140 48051 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51524000 21685 48 20303 40949 32895 32895 1 9606 Homo sapiens 0.0637586527232088 QNLIEELRK Unmodified 1141.6455 0.64552182 620 Q9UKD2;A0A024RAE1;B4DHZ2 MRTO4;C1orf33 mRNA turnover protein 4 homolog yes no 0 0 1 7.5 0.5 1 1 49.627 49.705 3 0.0009128 13415 20230619_1887_Aki_TMTPro18x_K_F7 103.18 32.818 245250 199750 220340 219610 201860 228550 257160 247260 261000 283360 215140 212090 327490 219450 170850 358460 315080 314430 226580 183060 225640 220410 212670 230920 256190 252240 264220 282230 227630 219010 323010 233780 185480 354880 300070 299110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 637590000 21686 620 20304 40950;40951 32896 32896 1 9606 Homo sapiens 0.08036488426091637 QNLLHSEK Unmodified 967.50869 0.50869399 2285 B2RAH5;O14974-2;O14974;A0A024RBF1;O14974-5;O14974-4;F8VZN8;O14974-3 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A yes no 0 0 0 6.5 0.5 1 1 37.386 37.452 3 0.0052915 8513 20230619_1886_Aki_TMTPro18x_K_F6 90.15 60.677 48564 33455 49545 41763 51074 53389 53709 56952 65232 47771 58805 55650 63315 56068 55625 58703 77580 68902 44869 30719 50221 41675 52988 53187 54371 57667 65480 49045 60808 56195 64155 57966 57920 59512 73956 65367 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53677000 21687 2285 20305 40952;40953 32897 32897 1 9606 Homo sapiens 0.02363999266378869 QNLLSVGDYR Unmodified 1163.5935 0.59348625 2629 B7ZAX9;B4DZC0;O60264;Q4W5G3 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 7 0 1 50.228 50.309 2 0.0031187 13745 20230619_1887_Aki_TMTPro18x_K_F7 94.66 43.214 305810 257450 294260 288540 287930 337320 314500 295710 361050 338240 258240 270160 328480 258380 279760 397200 351030 325320 282740 235960 299770 289580 300510 336480 316960 306110 361330 337610 272970 277050 330730 274320 289910 392510 334990 309840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220760000 21688 2629 20306 40954 32898 32898 1 9606 Homo sapiens 0.018233250123103062 QNLPLSSGK Unmodified 942.51345 0.51344502 1209 A0A140VJX3;P25325;P25325-2;Q2VEU1;B1AH49;Q59HD5 MPST 3-mercaptopyruvate sulfurtransferase;Sulfurtransferase yes no 0 0 0 2 0 1 43.875 43.958 2 0.047558 11657 20230619_1881_Aki_TMTPro18x_K_F2 63.184 20.158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21689 1209 20307 40955 32899 32899 1 9606 Homo sapiens 0.039888834091470926 QNLSQFEAQAR Unmodified 1290.6317 0.63166267 2481 Q8N684-3;Q8N684;Q8N684-2;B4DGF8;F5H669;F5H047;F5H6M0;J3QT54 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 0 0 0 5.5 0.5 1 1 43.63 43.717 2 7.8604E-17 11086 20230619_1885_Aki_TMTPro18x_K_F5 232.21 210.13 142490 124400 135980 154460 137820 166750 161940 164470 188700 177230 184310 171200 190580 155810 162560 192190 189300 180550 131760 114110 138850 153670 143810 167600 162720 168510 190520 178270 189470 173630 192960 163180 167430 191820 180800 171640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 206520000 21690 2481 20308 40956;40957 32900;32901 32900 2 9606 Homo sapiens -0.0020278907300053106 QNLYDLDEDDDGIASVPTK Unmodified 2106.9593 0.95932356 4336 Q96DI9;Q9BY77;F6VRR5;B4E0L0;F8WCX5;Q659C6;B4DMM2 POLDIP3;DKFZp434G0310 Polymerase delta-interacting protein 3 yes no 0 0 0 2.5 0.5 1 1 59.207 59.228 3 1.8805E-10 18119 20230619_1882_Aki_TMTPro18x_K_F3 134.21 126.41 98525 84356 91015 94900 80735 104540 94077 95392 108680 117480 130640 111510 126640 104900 109450 130860 114570 128960 91072 77313 92964 95124 85189 104760 94586 98669 110780 117360 132670 113340 128520 109820 112010 130920 109670 122450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51432000 21691 4336 20309 40958;40959 32902;32903 32903 2 9606 Homo sapiens -0.049877726938575506 QNMGPSGQTHPPPQTLPR Oxidation (M) 1957.9428 0.94284283 4096 Q69YJ7;Q9NTZ6;B4DRP9;B3KQH4 DKFZp667H197;RBM12 RNA-binding protein 12 yes no 0 1 0 7.5 0.5 1 1 32.966 33.01 3 1.3006E-06 6719 20230619_1888_Aki_TMTPro18x_K_F8 103.66 83.233 3071.9 3850.8 4387.7 5996.1 5174.2 4546.2 5519.5 3783.9 3509.6 5267.1 4833 5309 3768.2 3247 3791.8 3550.5 3790.3 5717.9 2836 3537.7 4368.7 5853.8 5302.1 4691.8 5481 3967.9 3750.2 5240 4854.7 5309.6 3879.8 3437.2 3854.8 3684.5 3639.9 5400.8 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 14594000 21692 4096 20310 40960;40961 32904;32905 32905 2668 2 9606 Homo sapiens 0.002189124497363082 QNPEMFK Unmodified 892.41129 0.41128813 3688 P61086;B4DIZ2;D6RDM7;P61086-2;B3KSH4 UBE2K;HIP2 Ubiquitin-conjugating enzyme E2 K yes no 0 0 0 5 0 1 44.87 44.948 2 0.025129 11634 20230619_1885_Aki_TMTPro18x_K_F5 98.299 50.556 86883 65201 79341 81723 77501 86662 79795 74403 97338 107330 110440 100050 107150 82129 96072 118210 134820 112840 80239 59850 81202 81235 80764 86988 80891 77758 98746 106480 112470 101340 108920 87263 100140 117830 128470 107310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40414000 21693 3688 20311 40962 32906 32906 1 9606 Homo sapiens -0.0392210593412301 QNPLDEQHIFQLPVRPTAVK Unmodified 2329.2543 0.25426421 2050 H3BQ07;A8K4T3;Q9H900-2;Q9H900 ZWILCH Protein zwilch homolog yes no 0 0 1 2 0 1 55.696 55.717 4 7.6759E-23 16873 20230619_1881_Aki_TMTPro18x_K_F2 191.8 166.86 32450 29243 29951 36691 31873 36516 32920 30351 36781 42095 41024 38703 39772 35914 36423 50628 42907 46920 30006 26825 30702 36425 33002 36799 33255 31764 37453 41811 41819 39372 40492 37906 37536 50386 41018 44590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66245000 21694 2050 20312 40963 32907 32907 1 9606 Homo sapiens 0.14280725026219443 QNPSLPAPQTLAGGNPETAQPHAGTLPR Unmodified 2819.4315 0.43145331 4095 Q68EM7;Q68EM7-5;Q68EM7-6;A0A2X0SF71;Q68EM7-2;Q68EM7-3;Q68EM7-7;B4DVF3;B4DWE9;I3L460;I3L3P1;I3L4Y5 ARHGAP17 Rho GTPase-activating protein 17 yes no 0 0 0 8 0 1 47.878 47.936 3 5.0849E-14 12690 20230619_1888_Aki_TMTPro18x_K_F8 130.57 128.83 3549.3 2765.4 5100.1 3327.6 2828.4 2651.9 3780.6 2974.6 2727.3 3887.6 3512.7 3186.5 4320.5 4910.2 3488.7 3431.8 6021.7 5682 3292.8 2537.1 5005.7 3310.6 3131.8 2743 3728.6 3044.2 2875.4 3858.6 3601 3324.2 4355.4 4929.8 3700.9 3598.8 5734.6 5374.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17870000 21695 4095 20313 40964 32908 32908 1 9606 Homo sapiens 0.0945148404784959 QNPSSPLQR Unmodified 1025.5254 0.52540669 1504 H0YM51;A0A3B3IRW9;A8K4R1;Q6P4E1-2;Q6P4E1-5;Q6P4E1 CASC4 Protein CASC4 yes no 0 0 0 7 0 1 33.403 33.484 2 0.0094322 6704 20230619_1887_Aki_TMTPro18x_K_F7 100.98 85.902 12604 9679.3 12515 11231 12935 12158 15248 14233 19713 14108 12431 14141 16538 14005 11971 13280 17088 15663 11650 8877.4 12719 11236 13453 12279 15369 14394 19530 14278 13284 14339 16539 14419 12541 13488 16291 14857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4191400 21696 1504 20314 40965 32909 32909 1 9606 Homo sapiens 0.013665001523349929 QNPVVEQNSQPPSGLSSNQLSK Unmodified 2337.1561 0.15606631 433 A0A024R784;O15164-2;O15164;B4DYZ9;Q6ZSA6 TRIM24 Transcription intermediary factor 1-alpha yes no 0 0 0 7 0 1 48.269 48.355 3 0.0005267 12827 20230619_1887_Aki_TMTPro18x_K_F7 70.99 62.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21697 433 20315 40966 32910 32910 1 9606 Homo sapiens 0.04097451919778905 QNQFYDTQVIK Unmodified 1382.683 0.68302954 95 Q9BUJ2;A0A0A0MRA5;Q9BUJ2-2;Q9BUJ2-4;A8K6U7;A8K3W4;B7Z4B8;A0A024R0J9;Q9BUJ2-3;A8K5K0;M0QYZ0;M0QZV6;M0R0K8;M0R203 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 0 7 0 1 50.912 50.989 2 2.3061E-17 14032 20230619_1887_Aki_TMTPro18x_K_F7 224.02 206.29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21698 95 20316 40967 32911 32911 1 9606 Homo sapiens 0.006995349010139762 QNQHEELQNVR Unmodified 1393.6698 0.66983909 4257 Q8NHH9-2;Q8NHH9;B7Z2H0;B5MCN0;Q8NHH9-3;Q8NHH9-5;Q8NHH9-4;C9JQQ5;B7Z8V5;H7C3A2 ATL2 Atlastin-2 yes no 0 0 0 2.5 0.5 1 1 28.624 28.715 3 1.6398E-06 5058 20230619_1882_Aki_TMTPro18x_K_F3 176.48 132.49 4934.5 3140.4 2915.1 3015.7 3919.2 3612 4261.2 2216.5 5395.8 3558.3 4264.1 6335.8 3948.5 2877 3656.1 5071.5 6010.2 4514.9 4541 2877.9 3144.3 3064.8 4002 3580.2 4304 2405.3 5380.4 3612.3 4428 6181.7 4026.8 3195.6 3860.1 5025.6 5717.4 4299.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63445000 21699 4257 20317 40968;40969 32912 32912 1 9606 Homo sapiens -0.011249031583474789 QNQTTSAVSTPASSETSK Unmodified 1822.8545 0.85446456 3613 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 5 0 1 37.785 37.878 3 2.3794E-09 8611 20230619_1885_Aki_TMTPro18x_K_F5 122.01 98.167 8537.7 4881 9502.4 10672 14758 15663 11459 11763 11295 9885.5 14560 15947 15921 11807 10600 8908.7 19189 15384 7887.1 4520.2 9657.8 10350 14815 15359 11744 12237 11643 10277 14847 15763 15947 12177 11333 9368.5 18251 14557 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87646000 21700 3613 20318 40970 32913 32913 1 9606 Homo sapiens -0.024048493797636183 QNRPIPQWIR Unmodified 1306.7258 0.72583783 3731 Q59GN2;P62891 RPL39P5;RPL39 Putative 60S ribosomal protein L39-like 5;60S ribosomal protein L39 yes no 0 0 1 6 0.816 1 1 1 42.599 42.683 3 0.00039461 10392 20230619_1887_Aki_TMTPro18x_K_F7 100.57 73.471 313380 298170 290670 254320 349050 512260 352970 367040 554840 128600 128930 142500 159120 134690 135690 155540 165750 138350 289900 272570 298010 264040 359520 494870 361530 378380 535440 144190 153680 143990 160590 140260 140140 154970 158110 131690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 542420000 21701 3731 20319 40971;40972;40973 32914;32915 32915 2 9606 Homo sapiens 0.08474394539780405 QNVAVNELCGR Unmodified 1258.6088 0.60881874 3947 Q15942;Q96AF9;Q28617;B4DY85;H0Y2Y8;Q9BUS0;Q15942-2;B4DQR8;C9JJK5 ZYX Zyxin yes no 0 0 0 5 0 1 41.584 41.669 2 3.5748E-07 10228 20230619_1885_Aki_TMTPro18x_K_F5 172.88 143.79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21702 3947 20320 40974 32916 32916 1 9606 Homo sapiens -0.010141314621478159 QNVAYEYLCHLEEAK Unmodified 1865.8618 0.86179854 707 P46940;A4QPB0;A0A024RC65;A0A0J9YXZ5;Q6P1N4;Q05DN7;Q5FWG8;A0A087X225 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 6 0 1 60.796 60.854 3 2.9439E-14 18473 20230619_1886_Aki_TMTPro18x_K_F6 184.41 160.58 64377 49446 55393 56813 43341 68350 58165 63258 70138 78700 81178 91478 98033 78055 61062 104130 93720 107220 59436 45345 56869 56936 46574 68079 58196 65370 71259 79082 83524 91834 97749 82359 64788 104250 89449 101760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50319000 21703 707 20321 40975 32917 32917 1 9606 Homo sapiens -0.036497883130323316 QNVNYQGGR Unmodified 1034.4894 0.48935553 787 X6R5E5;A8K2S7;A0A024RE02;Q8NBM4;B7Z6T7;Q8NBM4-4;Q8NBM4-3;Q8NBM4-2;A0A087WXT1;B3KW74 UBAC2;PHGDHL1 Ubiquitin-associated domain-containing protein 2 yes no 0 0 0 6 0 1 30.072 30.103 2 0.013138 5834 20230619_1886_Aki_TMTPro18x_K_F6 79.469 53.575 3147.8 1884.3 5670.8 5386.2 7449.9 9597.4 5890.3 8680.4 5301.5 3127.9 7400.6 9822.1 4627.1 4200.1 6613 2662.4 4909.4 8881.5 2925.1 1754.1 5577.5 5199.5 7557.4 9349.6 6022.4 8774.2 5503 3657 7392.7 9467.1 4902.3 4439 6575.2 3060 4741.3 8355.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2952700 21704 787 20322 40976 32918 32918 1 9606 Homo sapiens -0.02650957024525269 QNVQFMHNR Oxidation (M) 1188.5458 0.54582455 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;A0A994J766;Q6P468;Q59EZ5 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase yes no 0 1 0 8 0 1 28.88 28.906 3 0.0019896 5244 20230619_1888_Aki_TMTPro18x_K_F8 86.67 80.851 6845.9 4534.3 7409.3 6821.4 9441.1 9610.9 6516.2 7015.4 11285 5689.3 7896.7 6573.4 7279.3 5944.6 8722.2 5370.6 7778.3 6235.5 6327 4172.9 7503.5 6734 9570 9446.3 6888.1 7309.4 11072 5863.1 8226.7 6616.7 7515.9 6124.5 8772.3 5466.7 7440.7 5919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2780400 21705 1867 20323 40977 32919 32919 1202 1 9606 Homo sapiens -0.04090652459512967 QNWSIMFESEK Unmodified 1397.6286 0.62855113 4059 Q5T1M5;A0A8I5QJ94;Q5T1M5-2;A0A8I5QJL3;A0A8I5KX71;B4DZS8;A0A8I5KRH4;A0A8I5KV70;A0A8I5KRZ8;A0A8I5KQM8;Q5T1M5-3;A0A8I5KXA6 FKBP15 FK506-binding protein 15;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 1 0 1 50.768 50.768 3 0.061224 14665 20230619_1880_Aki_TMTPro18x_K_F1 53.237 21.563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21706 4059 20324 40978 32920 32920 1 9606 Homo sapiens -0.054358002420258345 QPAEHLQLLEEAAK Unmodified 1575.8257 0.82567103 2188 B1AHB0;P33992;Q53FG5;A8K521;B1AHA9 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 5 0.816 1 1 1 50.778 50.84 3 6.9732E-09 14120 20230619_1885_Aki_TMTPro18x_K_F5 159.18 129.85 421620 342630 444230 428620 352420 445470 440330 430130 475990 551730 527380 510220 561360 447370 536870 598570 527890 544930 390020 314410 447970 426110 376050 448720 440220 443760 485350 549680 540120 517810 570420 471660 546210 595910 505290 518080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 601520000 21707 2188 20325 40979;40980;40981 32921;32922 32921 2 9606 Homo sapiens 0.060791225724187825 QPAENVNQYLTDPK Unmodified 1615.7842 0.78420015 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67;Q5JRR6;B3KUJ2 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 5 0.816 1 1 1 51.296 51.356 3 2.0709E-05 14315 20230619_1885_Aki_TMTPro18x_K_F5 112.72 93.329 187320 164170 191050 194080 184540 174850 209410 194660 204240 236290 251890 239780 218790 185010 252010 211610 210870 198000 173310 150520 193650 193370 192550 178850 209610 198690 210360 236550 254760 241340 225820 194030 253180 211640 202070 188250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 747880000 21708 134 20326 40982;40983;40984 32923 32923 1 9606 Homo sapiens 0.0009394181308834959 QPAGPGSGIR Unmodified 938.49338 0.49337828 764 A0A0S2Z5Q3;Q8NBJ7-2;Q8NBJ7;J3KQJ1;A0A024RDK8;A0A384ME15;C9JL30;C9J660;Q75LP3;H7C3B2;B4DN71;E9PG02;F8WA42;Q8NBJ7-3 SUMF2;DKFZP566I1024 Sulfatase-modifying factor 2 yes no 0 0 0 6 0.816 1 1 1 32.245 32.315 2 0.038494 6215 20230619_1887_Aki_TMTPro18x_K_F7 68.016 25.243 15115 8202.1 15560 16257 11957 14311 12872 14857 15858 14516 22254 25790 19576 17957 21061 13522 30021 30418 13950 7585.4 15717 15718 12742 14616 13039 15139 16221 15025 22441 25380 20151 18560 21840 14627 28640 28710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17684000 21709 764 20327 40985;40986;40987 32924 32924 1 9606 Homo sapiens 0.02167132469196531 QPAIISQLDPVNER Unmodified 1578.8366 0.83657007 3811 Q08211;B3KU66;Q08211-2 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 4.8 0.748 2 2 1 55.196 55.243 2;3 3.0595E-07 15952 20230619_1885_Aki_TMTPro18x_K_F5 139.64 128.53 272180 213980 239240 228670 178200 212580 204390 204310 243600 303930 231080 202390 298970 210860 143870 361430 328540 287700 251370 196090 244750 229670 190910 216100 205930 211940 245940 298680 240220 210590 295540 225390 160410 355930 312280 274190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 847420000 21710 3811 20328 40988;40989;40990;40991;40992 32925;32926 32926 2 9606 Homo sapiens 0.07030524946685546 QPAIMPGQSYGLEDGSCSYK Oxidation (M) 2202.9562 0.95616921 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;M0QYT0;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 1 0 5.5 0.5 1 1 51.589 51.665 3 3.786E-05 14493 20230619_1885_Aki_TMTPro18x_K_F5 86.479 77.537 15075 12008 14909 14455 17664 13758 17672 17932 16206 24303 26411 23790 25299 22665 24883 22801 23581 21846 13936 11016 15191 14398 18076 14080 17784 18196 17030 24184 26555 24136 25833 23418 25226 22870 22563 20766 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136960000 21711 1455;1520 20329 40993;40994 32927;32928 32927 960 2 9606 Homo sapiens -0.09719062343856422 QPAIMPGQSYGLEDGSCSYK Unmodified 2186.9613 0.96125459 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;M0QYT0;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 0 0 6.5 0.5 1 1 55.286 55.354 3 1.0548E-11 16103 20230619_1886_Aki_TMTPro18x_K_F6 139.17 130.53 165090 129410 150250 166830 138560 141020 159470 156470 165420 199690 196060 196270 227760 205190 212900 259110 230320 237810 152500 118800 153770 165070 145330 144970 159830 160000 169600 199350 201140 199810 230820 214140 217980 258190 220250 226070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 647590000 21712 1455;1520 20329 40995;40996 32929;32930 32929 2 9606 Homo sapiens -0.08474758481224853 QPAPGGGGGGGPSPCGPGGGGR Unmodified 1789.7914 0.79142757 4521 Q9H6S0;D6RF50;D6RA70 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes no 0 0 0 6.5 0.5 1 1 33.23 33.293 3 7.1979E-17 6642 20230619_1887_Aki_TMTPro18x_K_F7 146.72 134.57 12337 9127.4 13894 10752 15250 18942 13822 14745 18476 9596.9 11334 8318 10281 7432.1 11014 6737.9 12311 8453.9 11413 8373.7 13987 10837 15716 18429 14165 15204 18244 9956.8 11900 8482 10556 7670.1 11232 6893.1 11740 8025.5 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13331000 21713 4521 20330 40997;40998 32931;32932 32932 2 9606 Homo sapiens -0.07187648858143802 QPAPMSTVLYNR Unmodified 1375.6918 0.69182009 4394 Q96RS6;Q96RS6-3;Q96RS6-2 NUDCD1 NudC domain-containing protein 1 yes no 0 0 0 2.5 0.5 1 1 48.02 48.095 2 5.3379E-05 13571 20230619_1881_Aki_TMTPro18x_K_F2 129.67 102.55 39221 33774 38556 41030 41660 43953 41261 42313 48968 51843 40664 43213 47724 43797 45572 54138 43875 44377 36273 30976 39278 40881 43011 44197 41870 43586 49178 51624 42447 44270 48405 45685 46334 53672 41999 42251 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109500000 21714 4394 20331 40999;41000 32933 32933 1 9606 Homo sapiens 0.019001852658902862 QPDRHPPEDFR Unmodified 1392.6535 0.65346075 4210 Q8IXT5;B9ZVT1 RBM12B RNA-binding protein 12B yes no 0 0 1 2.5 0.5 1 1 29.756 29.837 4 0.0059034 5509 20230619_1882_Aki_TMTPro18x_K_F3 63.662 50 21934 15599 28249 34356 34241 35954 33077 35182 32579 21400 34554 38407 25373 26389 36726 18436 38244 36769 20314 14433 28298 33132 35019 36184 33415 35641 33234 22887 35008 37789 26761 27189 37125 19741 36567 34734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12960000 21715 4210 20332 41001;41002 32934 32934 1 9606 Homo sapiens -0.027159843244589865 QPDSGISSIR Unmodified 1058.5356 0.53563702 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 4.5 0.5 1 1 38.548 38.615 2 4.3489E-07 8958 20230619_1883_Aki_TMTPro18x_K_F4 187.97 110.69 330940 276920 282640 335370 381060 405360 381200 375880 503430 391900 457680 474750 493870 369020 388020 523190 521490 476180 305680 254000 292950 334740 388220 403960 387950 386480 503760 397940 473270 474830 497690 392370 404520 520230 497360 452940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 556290000 21716 3384 20333 41003;41004 32935;32936 32935 2 9606 Homo sapiens 0.008710630869018132 QPDTPTELRA Unmodified 1126.5619 0.56185177 927 A0A0A0MR33;G3V267;G3V5T0;A0A0C4DFM0;G3V4T6;G3V3B9;Q59FU9;B2RDN1;O43708-2;O43708-3;O43708 GSTZ1 Maleylacetoacetate isomerase yes no 0 0 1 3 0 1 39.616 39.67 2 0.00018462 9475 20230619_1882_Aki_TMTPro18x_K_F3 142.55 106.35 47617 36577 44497 48209 58169 58117 64626 58413 77769 58623 67406 80606 70432 61494 63978 73351 87718 78232 43989 33590 45694 47855 59482 58030 65146 59679 78001 59933 69867 80155 71527 64668 66526 73769 83633 74288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31303000 21717 927 20334 41005 32937 32937 1 9606 Homo sapiens 0.0036333225837097416 QPEDDLFDR Unmodified 1133.4989 0.49891717 2724 P11387;B9EG90;A0A7P0T852 TOP1 DNA topoisomerase 1 yes no 0 0 0 1 0 1 47.722 47.722 2 0.00021265 13416 20230619_1880_Aki_TMTPro18x_K_F1 119.22 85.018 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21718 2724 20335 41006 32938 32938 1 9606 Homo sapiens -0.06249233529661069 QPEGTGMIDEEFTVAR Unmodified 1778.8145 0.814514 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;B4DS27 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 2 0 1 54.187 54.211 2 1.1013E-14 16284 20230619_1881_Aki_TMTPro18x_K_F2 191.06 156.68 16825 12945 14201 17803 10473 17031 14441 16452 20049 19189 17844 18709 21060 23141 17816 22885 21537 21386 15532 11893 14615 17561 11341 17249 14511 16919 20021 19244 18555 19167 21279 23686 18407 22907 20569 20329 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13860000 21719 2727 20336 41007 32939 32939 1 9606 Homo sapiens -0.04374067584058139 QPEGTPLNHFR Unmodified 1294.6418 0.64183343 1743 A0A8B0RAT7;Q6P2E9;B7Z7V8 EDC4 Enhancer of mRNA-decapping protein 4 yes no 0 0 0 7 0 1 37.803 37.867 3 2.7766E-09 8404 20230619_1887_Aki_TMTPro18x_K_F7 157.68 114.96 42296 32016 35638 42184 40909 41940 40990 41011 52965 48443 49538 46334 46576 38395 43686 48990 45201 50139 39041 29403 36869 41752 42089 42415 41693 42165 53137 48505 50831 46872 47484 40440 44590 49108 43268 47592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75677000 21720 1743 20337 41008 32940 32940 1 9606 Homo sapiens 0.006298186522144533 QPEWLEEQQGR Unmodified 1398.6528 0.65279205 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q9UPG3;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NuMA;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 2 0 1 46.295 46.374 2 2.1491E-06 12749 20230619_1881_Aki_TMTPro18x_K_F2 165.18 126.15 61716 49015 53057 63256 61702 80307 62882 59784 79687 70147 73834 81065 85529 68528 69561 81418 86172 83449 56991 44996 54824 62895 63585 79405 63840 62787 79989 70714 76574 81357 86150 71798 71994 81693 82269 79249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73668000 21721 349;3906 20338 41009 32941 32941 1 9606 Homo sapiens -0.030588237641495652 QPEYLDATGGTLHPYQMEGLNWLR Oxidation (M) 2804.3228 0.32281406 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 1 0 7 0 1 60.545 60.587 3 1.8838E-13 18033 20230619_1887_Aki_TMTPro18x_K_F7 128.51 115.28 29225 29173 28147 31075 31285 32280 33195 35604 35401 37520 41639 35736 43230 35587 31419 47376 39508 45346 27052 26710 28745 31258 32280 32645 33441 36184 36199 37754 42442 36403 43502 37344 32695 47254 37764 43070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46518000 21722 1005 20339 41010 32942;32943 32942 571 2 9606 Homo sapiens -0.007174432468218583 QPFTPTSR Unmodified 932.47158 0.4715802 3671 P57740;G3V1T4 NUP107 Nuclear pore complex protein Nup107 yes no 0 0 0 1 0 1 37.233 37.233 2 0.051282 8863 20230619_1880_Aki_TMTPro18x_K_F1 70.856 32.05 39491 28611 31760 35341 40914 46987 36818 36186 49577 39611 44757 41102 43490 36258 38097 46083 48665 42046 36431 26263 33064 35278 41723 46377 37748 37804 49563 39929 46057 41521 44178 38077 39459 45904 46415 40002 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19070000 21723 3671 20340 41011 32944 32944 1 9606 Homo sapiens 0.0026432772060616117 QPGITFIAAK Unmodified 1044.5968 0.59678072 1270 F8W787;A0A1B0GW44;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;V9HWI3;C9JH19;P07339;A0A1B0GVP3;A0A1B0GU92;A0A1B0GU03;F8WD96 CTSD;HEL-S-130P Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 0 0 0 3 0 1 54.474 54.52 3 0.0032852 16114 20230619_1882_Aki_TMTPro18x_K_F3 74.944 56.164 45747 40255 47520 55969 67067 74247 73497 75138 83863 46196 41460 37597 38277 32672 52220 38368 39819 31391 42334 36971 48489 55449 68285 73679 73994 75896 83048 48037 44406 38415 39839 34162 52091 38128 38160 29920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165130000 21724 1270 20341 41012 32945 32945 1 9606 Homo sapiens 0.07626619856978323 QPGNETADTVLK Unmodified 1271.6357 0.635745 2835 Q6FH24;D3DWY7;P61758-2;P61758 VBP1 Prefoldin subunit 3 yes no 0 0 0 3.5 0.5 1 1 44.463 44.522 3 0.0022755 11479 20230619_1883_Aki_TMTPro18x_K_F4 74.537 58.648 130680 106540 117410 120050 129800 152790 135910 128030 168710 141320 153630 158380 175310 135920 140570 178940 163700 161950 120730 97660 120590 120580 134170 151450 137670 132880 169360 142720 159280 159310 176520 143240 145040 178070 156390 154010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 328500000 21725 2835 20342 41013;41014 32946 32946 1 9606 Homo sapiens 0.010792556300202705 QPHVGDYR Unmodified 970.46208 0.46207815 1053 A0A384NQ35;A0A0K0K1L8;Q06323-3;Q06323;Q06323-2;Q6FHU3;Q86SZ9;H0YKK6 PSME1 Proteasome activator complex subunit 1 yes no 0 0 0 4 0.816 1 1 1 30.415 30.493 3 0.00055696 5710 20230619_1883_Aki_TMTPro18x_K_F4 119.86 70.422 83904 65581 83750 83788 109130 107730 106600 105730 136030 101170 133760 131070 123390 105950 114210 123510 153780 132610 77561 60201 85465 83442 111210 107100 108520 108020 136660 103460 136860 130910 125880 111030 118520 124320 146610 125930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 302540000 21726 1053 20343 41015;41016;41017 32947;32948;32949 32948 3 9606 Homo sapiens -0.024334405649028668 QPHYGAPAPR Unmodified 1092.5465 0.54647648 3094 H7C561;H7C0N4;L0R8E5 SF1 yes no 0 0 0 6.5 0.5 1 1 29.153 29.223 3 0.00022632 5042 20230619_1887_Aki_TMTPro18x_K_F7 109.66 96.31 23849 15223 21215 21890 29024 27868 23570 27457 28450 27131 25243 24692 29397 19266 26507 22325 32624 23863 22002 14005 21884 21633 29365 27720 24242 28049 28601 27358 26229 24984 29701 20247 27313 22487 31095 22681 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8462600 21727 3094 20344 41018;41019 32950;32951 32951 2 9606 Homo sapiens 0.003905102518501735 QPIDIFLSHDWPR Unmodified 1622.8205 0.82052608 1830 A0A8V8TMX5;Q9UK59;A0A8V8TMH0;A0A8V8TNX0 DBR1 Lariat debranching enzyme yes no 0 0 0 1 0 1 61.841 61.841 3 0.022722 19239 20230619_1880_Aki_TMTPro18x_K_F1 56.514 31.722 32262 25915 29656 33282 26747 30136 33041 35045 33044 37568 39003 34515 33855 33523 36886 37820 41891 40064 29809 23787 30321 32968 28184 30823 32968 35527 33912 37723 39491 35160 34896 34827 37736 38062 40020 38036 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20353000 21728 1830 20345 41020 32952 32952 1 9606 Homo sapiens 0.03402863500446074 QPLALNVAYR Unmodified 1143.64 0.64004252 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 2.5 0.5 1 1 50.156 50.219 2 2.5167E-05 14191 20230619_1882_Aki_TMTPro18x_K_F3 157.8 119.14 336300 289260 293160 299860 327320 387440 368900 370610 432490 202860 191080 163470 172010 143980 263120 198980 219080 168340 310740 264920 302010 303280 338780 384740 371310 375220 426630 213220 206620 167360 180580 152080 263150 197580 209690 160400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 990570000 21729 2621 20346 41021;41022 32953 32953 1 9606 Homo sapiens 0.0739680963426963 QPLEGSDLWSLNK Unmodified 1485.7464 0.74635808 1644 P33527-9;I3L4X2;P33527-5;A0A7I2V2E0;P33527-2;P33527-3;P33527;Q9UQ98;P33527-4;A0A7I2V4C6;P33527-6;P33527-7;P33527-8 ABCC1;MRP Multidrug resistance-associated protein 1 yes no 0 0 0 7 0 1 60.561 60.604 3 0.064908 18061 20230619_1887_Aki_TMTPro18x_K_F7 41.621 23.483 31785 24777 32017 32394 32396 31903 31155 30210 38741 36003 33568 37763 37838 38047 39045 38051 36211 40629 29384 22751 32503 32082 33567 32270 31726 31146 38846 36145 34910 38245 38578 39215 39522 38392 34704 38546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14504000 21730 1644 20347 41023 32954 32954 1 9606 Homo sapiens 0.02291475618289951 QPLLGPPESMR Unmodified 1223.6332 0.63324258 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 7 0 1 48.483 48.57 2 0.00066176 12973 20230619_1887_Aki_TMTPro18x_K_F7 112.36 81.068 60435 50846 55688 57328 48330 64395 72447 65297 85139 74353 75134 70115 79949 63801 75358 84067 78327 80616 55856 46605 56893 57479 51536 64584 72007 66896 85573 74557 77741 71197 81203 67115 76923 83934 74930 76598 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53722000 21731 12 20348 41024 32955 32955 1 9606 Homo sapiens 0.030371286913805307 QPMVPESLADYITAAYVEMR 2 Oxidation (M) 2315.0814 0.081369728 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 2 0 7 0 1 64.04 64.069 3 0.0085144 19707 20230619_1887_Aki_TMTPro18x_K_F7 54.235 47.461 20510 18932 23461 21350 25930 26778 23596 24676 29787 30175 25495 31965 31853 26220 26834 32508 28300 36137 19003 17347 23607 21444 26662 26629 24126 25492 29855 30255 26680 32146 32065 27579 27490 32751 27118 34256 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31247000 21732 1091 20349 41025 32956 32956 662;663 1 9606 Homo sapiens -0.023567702074615227 QPMVPESLADYITAAYVEMR Oxidation (M) 2299.0865 0.086455106 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 1 0 7.5 0.5 1 1 64.937 64.96 3 2.0462E-05 20050 20230619_1887_Aki_TMTPro18x_K_F7 91.337 89.603 11870 10966 10923 13139 12331 11138 13360 14625 15341 13666 17982 16866 18603 11121 14609 15643 15094 16702 10977 10054 11207 13068 12709 11503 13477 14675 15611 13953 18340 16791 18741 11921 14959 15702 14449 15846 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97517000 21733 1091 20349 41026;41027 32957 32957 662;663 1 9606 Homo sapiens -0.011124663447844796 QPPIQSTAGAVPVRNEK Unmodified 1790.9639 0.96389585 3657 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 0 0 1 4.5 3.5 1 1 41.278 41.278 3 0.057638 10683 20230619_1880_Aki_TMTPro18x_K_F1 58.98 38.395 31105 24118 27435 28725 27277 28162 29770 29846 29495 33445 37060 38267 35273 30006 36615 39370 36174 34550 28725 22124 28176 28632 28400 28570 29879 30476 30379 33736 37607 38353 36115 31706 37201 39139 34604 32873 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24706000 21734 3657 20350 41028;41029 32958;32959 32958 2 9606 Homo sapiens 0.10005245820866548 QPPLLGDHPAEYGEGR Unmodified 1734.8325 0.83254733 1520 A0A3B3ITJ4 yes yes 0 0 0 3 0 1 43.429 43.498 3 2.0271E-06 11132 20230619_1882_Aki_TMTPro18x_K_F3 121.82 106.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21735 1520 20351 41030 32960 32960 1 9606 Homo sapiens -0.005475645469914525 QPPSQFEPLDMK Unmodified 1415.6755 0.67550132 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 5.5 0.5 1 1 55.188 55.259 3 9.2394E-05 15937 20230619_1885_Aki_TMTPro18x_K_F5 94.122 80.158 175200 148100 159330 172450 157050 206720 174900 166520 221870 195660 182190 176680 205990 172900 184920 203200 181340 186080 161910 135790 163260 172590 164170 205450 176740 173690 221790 195740 189800 180110 208460 180090 188310 202720 173570 176900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 244340000 21736 1091 20352 41031;41032 32961;32962 32961 2 9606 Homo sapiens -0.015709406909081736 QPPTAAGRPVDASPR Unmodified 1518.7903 0.79028858 4757 Q9Y6G9;B3KM42;E9PHI6;B4DDM4 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 0 0 1 7 0.816 1 1 1 32.356 32.401 3 0.00041213 6239 20230619_1887_Aki_TMTPro18x_K_F7 90.498 62.171 36748 28653 34730 39217 43406 44266 46382 41261 47618 50877 61783 73930 68645 53752 44433 65387 89836 78408 33955 26322 35607 38789 44446 44314 46623 42644 49016 51587 63073 73289 68705 56750 48220 66181 85436 74376 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76959000 21737 4757 20353 41033;41034;41035 32963;32964 32964 2 9606 Homo sapiens 0.051645048352838785 QPQDGYLYR Unmodified 1138.5407 0.5407224 2739 P08069;C9J5X1 IGF1R Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain;Tyrosine-protein kinase receptor yes no 0 0 0 5 0 1 41.235 41.321 2 0.0033396 10106 20230619_1885_Aki_TMTPro18x_K_F5 98.009 65.168 36065 30588 37357 35635 44949 42466 41087 36926 47583 45190 51635 54617 52730 38205 46703 47757 57632 52761 33366 28044 37935 35673 45930 42325 41851 38342 48270 45515 52850 54443 53457 40487 48201 48116 55002 50078 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19045000 21738 2739 20354 41036 32965 32965 1 9606 Homo sapiens -0.023006330504813377 QPQGHLLLIGVSGAGK Unmodified 1573.894 0.89402537 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4.5 0.5 1 1 50.932 50.985 3 0.015031 14456 20230619_1883_Aki_TMTPro18x_K_F4 58.814 52.116 109760 81255 98865 120840 117990 144020 123530 117670 143110 143840 148210 138190 159310 139900 143120 181350 180050 185190 101350 74733 101780 118980 121350 143190 124820 122750 144930 143850 152240 140720 161540 146450 148070 181660 171950 175840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 528150000 21739 3881 20355 41037;41038 32966 32966 1 9606 Homo sapiens 0.13003411942941057 QPQPAQNVLAAPR Unmodified 1388.7524 0.75244651 3180 L0R6H6;Q6EEV4-2;Q6EEV4 GRINL1A;POLR2M DNA-directed RNA polymerase II subunit GRINL1A, isoforms 4/5 yes no 0 0 0 4.5 3.5 1 1 41.591 41.589 2 2.361E-07 10138 20230619_1888_Aki_TMTPro18x_K_F8 163.16 124.92 23025 15223 21507 23315 26373 29117 25408 23241 24359 25361 29622 31332 29547 22454 27144 27330 31901 28448 21253 14013 22058 22940 26979 28858 25644 24215 25092 25694 30155 31228 30027 23720 27906 27450 30453 27021 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23283000 21740 3180 20356 41039;41040 32967;32968 32968 2 9606 Homo sapiens 0.07362038640462742 QPQVAELLAEAR Unmodified 1323.7147 0.71466402 3624 V9HWE7;P51570;Q6ZP37;Q71UH7;K7EII7;K7ERJ9;B4E1A8;K7ERN9 HEL-S-19;GALK1 Galactokinase yes no 0 0 0 5 0 1 57.002 57.064 2 0.00025178 16653 20230619_1885_Aki_TMTPro18x_K_F5 114.93 61.38 37634 34185 38254 43937 44176 47383 42051 42570 45019 48101 49441 52881 56614 45964 49538 52249 52291 61416 34828 31365 38928 43602 45346 47546 42628 43977 45908 48456 50857 53219 57197 47998 50667 52909 50068 58202 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110070000 21741 3624 20357 41041 32969 32969 1 9606 Homo sapiens 0.06575527654990765 QPREDGNEEDKENQGDETQGQQPPQR Unmodified 3008.3092 0.3092255 3745 P67809;H0Y449;A0JLU4;Q2VIK8 YBX1 Nuclease-sensitive element-binding protein 1 yes no 0 0 2 1 0 1 31.716 31.716 4 4.7297E-49 6665 20230619_1880_Aki_TMTPro18x_K_F1 226.14 214.72 42224 44015 48774 40981 48451 33419 52930 47541 33597 54540 49259 23789 44213 24380 35760 37830 35704 14928 39160 40251 48927 41612 50234 34786 52538 47776 36043 53743 49410 25636 44774 25895 36514 36522 34018 14498 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31195000 21742 3745 20358 41042 32970;32971 32971 2 9606 Homo sapiens -0.1145967428305994 QPSEEEIIK Unmodified 1071.5448 0.54480473 2195 B1AKZ5;Q6FHL9;B1AKZ4;Q15121;Q15121-2 PEA15 Astrocytic phosphoprotein PEA-15 yes no 0 0 0 2 0 1 45.183 45.264 2 9.0698E-05 12240 20230619_1881_Aki_TMTPro18x_K_F2 166.07 62.199 52750 47403 59556 58471 58406 77125 66737 57042 87183 72902 70085 80085 77248 65550 60684 87551 86045 81174 48858 43476 59930 58374 61093 76083 67407 60112 86953 73104 73071 80459 77864 69243 63546 87189 82048 77185 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31510000 21743 2195 20359 41043 32972 32972 1 9606 Homo sapiens 0.011894116525809295 QPSKPEIVSK Unmodified 1111.6237 0.62372375 3867 Q13740-2;F5GXJ9;Q13740;B3KNN9;B4DX43 ALCAM CD166 antigen yes no 0 0 1 8 0 1 42.401 42.404 3 0.0040081 10441 20230619_1888_Aki_TMTPro18x_K_F8 77.644 46.576 85281 62764 80854 88983 177420 161580 154360 160720 181790 140190 121400 118430 174840 103360 102470 160680 138740 111220 78774 57695 84005 88628 175780 157890 157670 163540 181280 142180 129640 120800 173050 110300 107780 157610 132200 106270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106180000 21744 3867 20360 41044 32973 32973 1 9606 Homo sapiens 0.07237683677522 QPSPEEIR Unmodified 954.47706 0.47705951 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DQN8 PRRC2C Protein PRRC2C yes no 0 0 0 2 0 1 34.964 35.021 2 0.0086469 7680 20230619_1881_Aki_TMTPro18x_K_F2 104.06 59.336 28941 21518 26255 32002 30521 44273 33932 32158 46023 33771 33442 44149 41832 36144 33796 39219 46225 40191 26725 19790 27010 31584 31567 43516 34366 33741 45673 34398 35336 44038 42071 37699 35219 39407 44066 38186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25795000 21745 2894 20361 41045 32974 32974 1 9606 Homo sapiens -0.0019999348756982727 QPSPEEIRER Unmodified 1239.6208 0.62076364 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DQN8 PRRC2C Protein PRRC2C yes no 0 0 1 2 0 1 32.255 32.315 3 0.021138 6618 20230619_1881_Aki_TMTPro18x_K_F2 64.918 27.854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21746 2894 20362 41046 32975 32975 1 9606 Homo sapiens 0.010538085527059593 QPSQGPTFGIK Unmodified 1158.6033 0.60332266 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A494C1T2;A0A8V8TMA9 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 1.67 0.471 1 2 48.403 48.45 2;3 2.7766E-09 13686 20230619_1881_Aki_TMTPro18x_K_F2 157.68 106.4 483230 401910 441180 464230 455310 508940 497930 480520 550200 552230 585680 566990 614870 496550 547760 668520 641530 599740 446560 368480 452030 464390 473130 510690 501270 494840 559070 554720 600380 572840 623320 523630 564010 664830 612620 570520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 722430000 21747 2973 20363 41047;41048;41049 32976;32977 32976 2 9606 Homo sapiens 0.030365130177187893 QPSSQDALQGR Unmodified 1185.5738 0.57381344 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-5;Q13308-3;Q59FV9;Q86X91;B7Z471;F8WDG7;C9J9E8 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 3.5 0.5 1 1 33.383 33.442 2 0.00026095 6950 20230619_1882_Aki_TMTPro18x_K_F3 123.96 99.984 37857 17276 46161 43730 58950 72077 54800 57577 56047 42650 70448 93170 69154 57878 65696 30461 79424 80102 34972 16065 46392 42301 60132 70315 55555 59422 57522 45438 71705 90951 70445 59456 67418 33952 75864 75553 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46081000 21748 3847 20364 41050;41051 32978;32979 32978 2 9606 Homo sapiens -0.011550509984317614 QPSVDGEDNFR Unmodified 1262.5527 0.55274365 2942 E9PP40;Q15048 LRRC14 Leucine-rich repeat-containing protein 14 yes no 0 0 0 2 0 1 40.231 40.304 2 0.0084686 9944 20230619_1881_Aki_TMTPro18x_K_F2 82.831 58.055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21749 2942 20365 41052 32980 32980 1 9606 Homo sapiens -0.06803061097957652 QPTIFQNK Unmodified 974.51853 0.5185304 3713 P62280;M0QZC5;M0R1H6 RPS11 40S ribosomal protein S11 yes no 0 0 0 1.5 0.5 1 1 47.347 47.385 3 0.0051314 13284 20230619_1880_Aki_TMTPro18x_K_F1 90.657 64.273 429320 298430 405430 413220 478070 510570 498340 466760 554350 485920 483850 460460 537860 420760 436180 496980 576510 501040 396420 274320 414990 409070 491310 507830 502890 480370 558740 489480 501890 467360 542320 439600 453360 498270 549720 476120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1409900000 21750 3713 20366 41053;41054 32981;32982 32981 2 9606 Homo sapiens 0.030251872717599326 QPTPIQK Unmodified 810.45995 0.45995289 2338 B7Z6D5;B3GQE6;Q96GQ7;A0A087X059 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 0 0 8 0 1 39.476 39.465 2 0.039692 9254 20230619_1888_Aki_TMTPro18x_K_F8 85.064 29.053 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21751 2338 20367 41055 32983 32983 1 9606 Homo sapiens 0.047141306972775965 QPTPVNIR Unmodified 923.51886 0.51886475 4732 X6R700;Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3;A0A087X1B7 CHTOP Chromatin target of PRMT1 protein yes no 0 0 0 7.5 0.5 1 1 37.545 37.57 2 0.028729 8512 20230619_1888_Aki_TMTPro18x_K_F8 81.215 32.711 64561 48297 44623 61691 67044 76819 64799 65952 98016 60764 70475 77124 81378 69442 59038 97385 120670 104610 59513 44342 47435 61359 67944 76265 66438 67992 96757 62283 74088 77358 81748 73363 64029 97684 114750 99338 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57921000 21752 4732 20368 41056;41057 32984 32984 1 9606 Homo sapiens 0.05404606991601213 QPTVGGTSSTPR Unmodified 1186.5942 0.59421454 2988 F8W108;F8WCU9;Q68CP9-3;Q68CP9;F8VWP4;Q8NBP1;A0A087WY37;Q4G0S8;Q8WV72;Q96SQ4 ARID2 AT-rich interactive domain-containing protein 2 yes no 0 0 0 6 0 1 32.021 32.054 2 0.013322 6534 20230619_1886_Aki_TMTPro18x_K_F6 74.962 44.293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21753 2988 20369 41058 32985 32985 1 9606 Homo sapiens 0.008381196613754582 QPTVTSVCSETSQELAEGQR Unmodified 2206.0172 0.017189567 758 A0A024RDE8;Q96HC4;B7Z481;Q4W5K9;Q9P1D1 PDLIM5;LIM PDZ and LIM domain protein 5 yes no 0 0 0 3 0 1 47.354 47.434 3 4.8243E-45 13002 20230619_1882_Aki_TMTPro18x_K_F3 254.44 240.71 18169 11041 12397 13508 17115 15526 16354 16053 19970 18162 17947 18464 23810 20289 17813 24144 23628 24337 16729 10142 13147 13467 17378 15569 16640 16418 20067 18260 18764 18803 23837 21074 18574 24192 22555 23111 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65067000 21754 758 20370 41059 32986 32986 1 9606 Homo sapiens -0.03757834040061425 QPVFGANYIK Unmodified 1135.6026 0.60259438 523 K7EIJ0;B4DFL8;B4DV07;K7ENL2;A6NG10;K7EMC9;Q7Z511;A0A024R8L1;Q969T9-2;Q969T9;K7EIN1;K7ESN4 WBP2 WW domain-binding protein 2 yes no 0 0 0 3 0 2 53.565 53.618 2;3 4.2232E-07 15756 20230619_1882_Aki_TMTPro18x_K_F3 149.94 107.19 56713 45891 49206 66134 58294 63738 63192 62813 72665 55231 55338 49288 50845 41559 53486 62124 51100 47037 52380 42176 50852 65048 59983 64593 63702 64050 72749 56071 57367 50097 52156 44200 54260 61232 48887 44851 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105940000 21755 523 20371 41060;41061 32987;32988 32988 2 9606 Homo sapiens 0.04021718368653637 QPVLSQTEAR Unmodified 1127.5935 0.59348625 1228 P28070;A0A140VK46 PSMB4 Proteasome subunit beta type-4 yes no 0 0 0 4 0 1 36.905 36.949 2 0.00048731 8264 20230619_1883_Aki_TMTPro18x_K_F4 123.11 85.025 99244 58913 100750 114210 121910 149960 104590 121100 446420 112430 122560 147390 139730 124770 130280 109110 154480 148360 91622 54438 102620 111120 125380 148120 116660 125440 421350 116020 141730 147140 141860 128630 133840 112180 147520 140520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45927000 21756 1228 20372 41062 32989;32990 32990 2 9606 Homo sapiens 0.03479325012312984 QPWFLGDK Unmodified 989.49707 0.49706667 1487 P28161;A0A384P5E9;P28161-2;F6XZQ7;E9PHN6;A8HT81;E9PHN7;E9PLF1;E9PGV1 GSTM2 Glutathione S-transferase Mu 2 yes no 0 0 0 1 0 1 58.735 58.735 3 0.069764 18012 20230619_1880_Aki_TMTPro18x_K_F1 40.724 16.635 33706 31163 34645 39087 40002 45187 46634 45848 44219 44699 51264 50136 48250 45497 51159 46998 53525 58187 31199 28583 35233 38900 41290 45239 46560 46762 45459 45394 52143 50499 49505 47161 52079 47846 51222 55131 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27647000 21757 1487 20373 41063 32991 32991 1 9606 Homo sapiens 0.0018980224305096272 QQAADLISR Unmodified 1000.5302 0.53015772 3309 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 5.5 0.5 1 1 40.63 40.72 2 0.00013293 9815 20230619_1885_Aki_TMTPro18x_K_F5 150.27 92.986 399410 279160 325150 376950 428930 449790 404350 401800 497190 396480 490270 522250 501540 391540 412120 471160 582250 491710 368420 256530 338310 373440 436800 448180 411930 413720 500620 404960 503930 520040 507210 412470 430300 473190 554820 467140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 768680000 21758 3309 20374 41064;41065 32992;32993 32992 2 9606 Homo sapiens 0.029913842950804792 QQAAYYAQTSPQGMPQHPPAPQGQ Oxidation (M) 2596.1765 0.17648418 2644;4322 B4E0X8;A0A994J6G7;Q96AE4;A0A1Z1G4M2;B4DT31 FUBP1 Far upstream element-binding protein 1 no no 0 1 0 6.5 0.5 1 1 41.254 41.336 3 5.3128E-06 10118 20230619_1886_Aki_TMTPro18x_K_F6 93.572 85.58 9396.7 8055.6 10760 14125 15493 12421 13819 10526 11833 13378 15850 12873 12831 11955 12493 15141 14019 14400 8701.9 7420.8 10903 13727 15624 12652 13964 10978 12332 13352 15922 12954 13181 12526 12809 15115 13402 13683 3 3 3 3 3 3 3 3 3 3 3 2 3 3 3 3 3 3 67993000 21759 2644;4322 20375 41066;41067 32994;32995;32996 32994 1600 3 9606 Homo sapiens -0.057757006921292486 QQAAYYAQTSPQGMPQHPPAPQGQ Unmodified 2580.1816 0.18156955 2644;4322 B4E0X8;A0A994J6G7;Q96AE4;A0A1Z1G4M2;B4DT31 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 7 0 1 45.444 45.53 3 1.4051999999999998E-19 11525 20230619_1887_Aki_TMTPro18x_K_F7 155.87 124.9 18572 18107 24519 23830 16357 24230 23533 20056 19478 25779 26686 27306 29946 20830 20007 28820 30378 28052 17239 16614 24295 23598 17846 24359 23201 20949 20383 25779 27178 27431 29961 22142 21139 28762 28949 26661 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 145400000 21760 2644;4322 20375 41068 32997;32998 32998 2 9606 Homo sapiens -0.04531396829543155 QQAIELTQEEPYSDIIATPGPR Unmodified 2455.2231 0.22308324 577 A0A024R9J0;O60216;B3KUT8;E5RG18 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 0 0 3.5 0.5 1 1 60.688 60.704 3 2.8801E-17 18601 20230619_1883_Aki_TMTPro18x_K_F4 160.67 154.1 9729.6 7247.9 9338.3 11338 9893.6 11082 12087 10255 9843.9 10278 10839 10268 9753.7 9703.2 12643 9636.5 12225 11709 8988.7 6670.2 9541.1 11103 10285 11201 11987 10543 10196 10385 11032 10405 10135 10022 12765 9811.4 11697 11101 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35814000 21761 577 20376 41069;41070 32999 32999 1 9606 Homo sapiens 0.053680624109347264 QQANTIFWSPQGQFVVLAGLR Unmodified 2359.2437 0.24369953 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;Q59FS8 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 7 0 1 64.751 64.778 3 6.0031E-05 20019 20230619_1887_Aki_TMTPro18x_K_F7 80.98 57.418 12458 12525 13395 14127 10894 16436 14413 17782 15797 17524 13921 14351 16760 16159 13711 16772 16037 16693 11543 11474 13503 14171 11640 16465 14382 18050 15957 17624 14498 14771 16886 16637 14141 16833 15326 15854 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23476000 21762 487 20377 41071 33000 33000 1 9606 Homo sapiens 0.11844742371840766 QQAPPVR Unmodified 794.43989 0.43988615 1284 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q8NAN9 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 0 0 0 4.5 0.5 1 1 28.469 28.541 2 0.022574 5218 20230619_1885_Aki_TMTPro18x_K_F5 101.72 80.02 30097 15869 34802 34248 46336 54310 39747 48812 35583 27644 49189 48937 35932 39130 48630 16022 55050 45489 27804 14699 35136 33304 47036 53212 40372 49646 36966 29716 49273 48355 37752 39456 49391 18236 52543 42928 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30147000 21763 1284 20378 41072;41073 33001 33001 1 9606 Homo sapiens 0.03444379757331717 QQASSWVPLLNK Unmodified 1369.7354 0.73539946 2157 Q05DS5;A8KAM5;Q8N474 SFRP1 Secreted frizzled-related protein 1 yes no 0 0 0 4 0 1 60.714 60.717 3 0.0001351 18593 20230619_1883_Aki_TMTPro18x_K_F4 106.49 73.083 45948 41883 46258 35636 37014 42340 45373 48241 60028 72007 80521 89029 68383 70465 86107 72224 75106 87648 42519 38292 46762 36667 39437 42480 45757 49488 61158 71982 81207 88909 71078 73345 86569 73466 72054 83039 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41868000 21764 2157 20379 41074 33002 33002 1 9606 Homo sapiens 0.06532118034647283 QQCAFDR Unmodified 923.39195 0.39194967 2960 F5GX09;Q5HYJ3;Q5HYJ3-3;Q5HYJ3-2;A8K255;E9PQL1;Q8TAV0-2;Q8TAV0;Q8TAV0-4;Q8TAV0-3 FAM76B;FAM76A Protein FAM76B;Protein FAM76A yes no 0 0 0 3 0.816 1 1 1 32.385 32.451 2 0.018629 6553 20230619_1882_Aki_TMTPro18x_K_F3 113.41 94.629 42814 27360 50966 47536 59177 56217 54681 56297 55042 44987 57615 49182 57193 41796 51642 29382 62957 46443 39597 25231 51186 46445 60591 56178 55429 57197 56120 46205 58917 49485 58076 42761 53099 30762 60013 43991 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29847000 21765 2960 20380 41075;41076;41077 33003;33004 33003 2 9606 Homo sapiens -0.0728106222502447 QQCEFAK Unmodified 909.40145 0.40145173 2594 B4DUR7;F6SKB8;Q53FE5;Q9NVZ3-3;Q9NVZ3;Q9NVZ3-2;D6RB24;Q9NVZ3-4 NECAP2 Adaptin ear-binding coat-associated protein 2 yes no 0 0 0 5 0 1 39.622 39.712 2 0.064419 9411 20230619_1885_Aki_TMTPro18x_K_F5 79.713 48.183 24380 16021 36406 37873 46919 53635 30840 42195 38697 34096 41734 54008 44643 40058 43197 22678 57040 55051 22608 14848 36141 36603 47471 52724 32323 43652 39106 35500 42890 53363 45427 40891 44593 24951 54428 51952 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6343800 21766 2594 20381 41078 33005 33005 1 9606 Homo sapiens -0.056872939395020694 QQDLDGELR Unmodified 1072.5149 0.51490158 2446 Q99459;B3KY60;B4DSH1 CDC5L Cell division cycle 5-like protein yes no 0 0 0 1 0 1 39.942 39.942 2 0.0096306 10072 20230619_1880_Aki_TMTPro18x_K_F1 99.855 56.121 85481 62363 67789 85871 86781 94647 89972 88449 126800 92220 112090 121580 115280 84564 94254 112840 118210 114690 78853 57309 70732 84856 88825 94883 91625 90917 126370 93948 115860 120830 116490 89981 97636 112980 112850 108920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46787000 21767 2446 20382 41079 33006 33006 1 9606 Homo sapiens -0.018455272927667465 QQDLHLESPQR Unmodified 1349.6688 0.66877646 4520 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 yes yes 0 0 0 3 0 1 35.909 35.966 3 5.5004E-09 7941 20230619_1882_Aki_TMTPro18x_K_F3 149.23 128.44 31959 18273 33225 35520 37368 41301 42897 37028 48000 32050 34587 40244 37525 28572 32998 41088 44569 38435 29506 16889 33729 34496 38630 41195 43060 38014 48026 32934 36286 40088 37989 30522 34314 40915 42489 36556 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41263000 21768 4520 20383 41080 33007 33007 1 9606 Homo sapiens 0.007928824727287065 QQDQFYYLLDR Unmodified 1487.7045 0.70449327 2804 CON__Q9N2I2 yes yes 0 0 0 5.5 0.5 1 1 59.471 59.529 2 0.00054646 17909 20230619_1886_Aki_TMTPro18x_K_F6 115.15 19.534 + 49449 43681 56857 55898 57883 60013 58391 61605 52556 72680 102040 107140 71894 69351 106080 67497 73602 105620 45804 40080 57144 55512 59978 60420 58739 63129 55847 73821 101150 105860 75940 72679 105270 70114 70957 99798 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67768000 21769 2804 20384 41081;41082 33008 33008 1 -0.01985080070244294 QQDSTYPIK Unmodified 1078.5295 0.52948901 247 A0A024R3J7;P46977;P46977-2;H0YET6 hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 0 0 5 0 1 42.677 42.76 2 0.0001732 10665 20230619_1885_Aki_TMTPro18x_K_F5 134.25 78.864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21770 247 20385 41083 33009 33009 1 9606 Homo sapiens -0.006634551446268233 QQDVLGFLEANK Unmodified 1360.6987 0.69867961 2824 D3DTE6;V9HW48;O75368 SH3BGRL;HEL-S-115 SH3 domain-binding glutamic acid-rich-like protein yes no 0 0 0 7 0 1 62.364 62.4 3 0.000942 18900 20230619_1887_Aki_TMTPro18x_K_F7 74.613 24.839 93798 99807 131720 105030 121970 161530 152400 113250 133990 157510 174110 193700 155410 154930 180410 178980 188100 216630 87185 91355 130410 106440 128300 157920 151300 120300 139200 157910 176150 193590 160540 162300 183440 181580 180090 205250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 483060000 21771 2824 20386 41084 33010 33010 1 9606 Homo sapiens 0.03275821418128544 QQEAALELEELK Unmodified 1399.7195 0.71947463 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;C9J813;Q6PJM5;B4E3I0 CALD1 Caldesmon yes no 0 0 0 2.5 0.5 1 1 57.692 57.715 3 0.023256 17530 20230619_1882_Aki_TMTPro18x_K_F3 57.328 37.221 73094 60237 69326 74407 61457 84016 65883 62947 87702 98303 96138 95363 106200 91466 81219 108720 96688 102440 67562 55265 70659 74085 64757 83717 66875 66725 88519 97390 98639 96808 106890 95382 84038 108550 92401 97344 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228950000 21772 3798 20387 41085;41086 33011 33011 1 9606 Homo sapiens 0.03560367007116838 QQEEILR Unmodified 914.48214 0.48214489 288 Q6Y7W6;Q6Y7W6-5;Q6Y7W6-4;A0A024R4A5;Q6Y7W6-3;I1E4Y6;A0A7I2V361;A0A7I2V3H0;A0A7I2V516;E7ESB6;A0A7I2V3H7;B4DZM1;B4DRT8;C9JHW1 GIGYF2;TNRC15 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 0 0 0 2 0 1 36.878 36.936 2 0.024678 8473 20230619_1881_Aki_TMTPro18x_K_F2 98.904 35.597 39770 25675 35605 47836 43048 50789 43838 43221 66504 48629 53079 55476 61707 45158 46481 52509 60545 59935 36694 23701 36706 46463 44226 50916 44833 44840 65882 49113 55459 55648 61949 47353 48339 53046 57789 56850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21408000 21773 288 20388 41087 33012 33012 1 9606 Homo sapiens 0.02148310375048368 QQEEMMR Unmodified 950.39499 0.39498614 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;H7C367 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 1.5 0.5 1 1 32.757 32.787 2 0.056552 7107 20230619_1880_Aki_TMTPro18x_K_F1 83.265 48.064 32426 22894 42172 39844 48018 57790 45748 42566 52275 46360 57775 59003 59642 51510 51743 35096 68375 59049 30033 21104 42111 39046 49370 56684 46466 44646 53082 47063 59102 59021 60450 52542 53570 36936 65195 55865 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48041000 21774 1112 20389 41088;41089 33013 33013 1 9606 Homo sapiens -0.08219555162520464 QQEGESRLNLVQR Unmodified 1555.8067 0.80666693 1577;3370 P07195;Q5U077;A0A5F9ZHM4;A0A3B3IS95;A8MW50;C9J7H8;V9HWB9;P00338;P00338-3;B4DJI1;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2 LDHB;HEL-S-133P;LDHA L-lactate dehydrogenase B chain;L-lactate dehydrogenase;L-lactate dehydrogenase A chain no no 0 0 1 5 0 1 36.254 36.346 3 0.00010448 8038 20230619_1885_Aki_TMTPro18x_K_F5 106.26 70.844 12591 12435 14241 13694 16847 10439 14616 16713 13756 19659 20556 21191 20685 17253 18659 24208 22570 20618 11670 11389 14354 13699 17158 10975 14857 16714 14364 19733 20781 21315 21010 18289 19256 23999 21543 19629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39155000 21775 1577;3370 20390 41090 33014 33014 1 9606 Homo sapiens 0.05099586001369971 QQEGFKPNYMENR Oxidation (M) 1655.7362 0.7362041 2614 B4DWI8;Q8WXF1 PSPC1 Paraspeckle component 1 yes no 0 1 1 6 0 1 38.392 38.475 3 0.052806 8881 20230619_1886_Aki_TMTPro18x_K_F6 50.222 42.133 35428 25833 29605 38263 44794 40346 37734 38216 41192 40465 50862 49495 54047 38108 43979 47558 48058 42409 32692 23760 30825 37620 45080 40603 38567 39258 42158 41042 51848 49467 54520 40202 45140 47348 45903 40355 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72277000 21776 2614 20391 41091 33015 33015 1572 1 9606 Homo sapiens -0.06543455378619001 QQEGFKPNYMENR Unmodified 1639.7413 0.74128948 2614 B4DWI8;Q8WXF1 PSPC1 Paraspeckle component 1 yes no 0 0 1 7 0 1 41.893 41.965 3 6.2894E-07 10055 20230619_1887_Aki_TMTPro18x_K_F7 144.2 133.52 66464 52066 56900 74596 59359 76103 60796 64332 76749 75411 81911 77033 82546 61956 73386 87874 84801 74003 61368 47854 58746 73442 61638 76526 61734 66845 77493 75676 83780 77660 83742 65791 75492 87072 80952 70475 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48396000 21777 2614 20391 41092 33016 33016 1 9606 Homo sapiens -0.052991515159874325 QQEIVVSR Unmodified 957.52434 0.52434406 3931 Q15393;A8K6V3;Q15393-2;I3L4G7 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 4 0.816 1 1 1 36.147 36.211 2 0.013645 7986 20230619_1883_Aki_TMTPro18x_K_F4 94.692 28.257 182390 116910 166560 195260 219950 241540 211810 218180 268730 205940 266520 268840 264760 211720 219680 194800 300250 275940 168300 107750 171500 191190 224140 240070 215770 224180 270190 210810 273420 268060 268100 219540 228460 200670 286330 261320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 389170000 21778 3931 20392 41093;41094;41095 33017;33018 33017 2 9606 Homo sapiens 0.0438828578344328 QQELDLAAEQHR Unmodified 1436.7008 0.70080487 1384 A0A2X0SFJ0;O75962-4;O75962;E7EPJ7;O75962-5;O75962-2;E7EWP2;D3DTD2;A0A8V8TLX5;A0A994J7G8;F5H228;B4E3M5 TRIO Triple functional domain protein yes no 0 0 0 2 0 1 38.181 38.245 3 0.00058558 9037 20230619_1881_Aki_TMTPro18x_K_F2 92.906 68.115 17173 12117 16500 19409 24318 28800 23669 23609 22273 20404 23227 27733 23315 22147 23844 18814 30771 27599 15861 11157 16959 19106 24631 28271 23855 24389 22806 21018 23829 27606 23841 22851 24587 19471 29352 26132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21700000 21779 1384 20393 41096 33019 33019 1 9606 Homo sapiens -7.749844121462957E-05 QQELIQK Unmodified 885.49198 0.4919813 635 A0A024RAV2;P46063;F8WA66;F8WD97;F5H4P4;F5H3W0;F5H2L2;F5GYB7 RECQL ATP-dependent DNA helicase Q1 yes no 0 0 0 5.5 0.5 1 1 42.745 42.833 2 0.0038795 10706 20230619_1885_Aki_TMTPro18x_K_F5 119.17 23.643 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21780 635 20394 41097;41098 33020;33021 33020 2 9606 Homo sapiens 0.04465498380443478 QQEQADSLER Unmodified 1202.5527 0.55274365 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 1 0 1 32.257 32.257 2 6.7558E-07 6866 20230619_1880_Aki_TMTPro18x_K_F1 210.08 158.29 68809 38679 95229 100280 150320 183700 112760 136950 113560 85433 139030 165140 127230 123000 135390 51354 154420 144510 63704 35940 95422 97121 150830 178130 115990 141670 116540 91559 141140 162390 130700 124500 138090 58274 147490 136310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158870000 21781 349;3906 20395 41099 33022 33022 1 9606 Homo sapiens -0.040430610979456105 QQETEHIPR Unmodified 1136.5574 0.5574351 4268 Q8TCG1;Q8TCG1-2 KIAA1524 Protein CIP2A yes no 0 0 0 2 0 1 29.529 29.597 3 1.9704E-09 5554 20230619_1881_Aki_TMTPro18x_K_F2 192.26 159.66 20566 14549 17111 18975 21381 22210 17305 23266 25850 20370 19632 20692 24509 17119 18601 18661 29200 20338 18975 13364 17739 18841 21778 22237 17962 23597 25603 20756 20647 20863 24568 17879 19598 18824 27775 19332 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35253000 21782 4268 20396 41100 33023 33023 1 9606 Homo sapiens -0.005381321645245407 QQEVETELK Unmodified 1102.5506 0.55061839 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-3;M0QYR1;M0QX04 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 0 2.5 0.5 1 1 43.78 43.856 3 0.00065524 11622 20230619_1881_Aki_TMTPro18x_K_F2 107.55 72.376 138220 110030 140740 164830 166670 189380 184830 185730 218990 181690 228130 225170 207690 182030 195380 157860 229140 217210 127810 101180 143330 162190 171620 189460 186340 189900 221320 185210 232700 225070 212080 187950 200530 162500 218830 205720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 324170000 21783 33 20397 41101;41102 33024 33024 1 9606 Homo sapiens 0.00344510164222811 QQEVVVAGSSLPTSSK Unmodified 1615.8417 0.84171503 257 A0A024R3P9;Q9H3P7 ACBD3 Golgi resident protein GCP60 yes no 0 0 0 6.5 0.5 1 1 47.986 48.07 3 0.047734 13080 20230619_1886_Aki_TMTPro18x_K_F6 43.955 28.415 32159 29589 31845 37564 33504 44552 38718 38409 42705 36137 43000 44843 41403 34037 39743 42723 45322 45769 29758 27144 32448 37357 34870 44356 38860 39611 43259 36916 44049 44769 42225 35929 40767 42955 43313 43438 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221750000 21784 257 20398 41103;41104 33025 33025 1 9606 Homo sapiens 0.05842784018659586 QQEYDFK Unmodified 956.42396 0.42396131 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 0 0 4 0 1 44.702 44.746 3 0.0017905 11599 20230619_1883_Aki_TMTPro18x_K_F4 125.81 96.467 93797 67176 85554 91658 98816 100540 100260 94355 128090 94514 123550 120360 116950 91739 109990 107560 128470 114620 86601 61731 87821 90649 101630 100860 101850 96865 128580 96358 126660 120070 119200 96434 112970 108250 122650 108840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42550000 21785 1473 20399 41105 33026 33026 1 9606 Homo sapiens -0.05599371270238862 QQFEGYGLEIPDILNASNLK Unmodified 2248.1376 0.1375627 3034 H0Y9X1;Q96EY4;D6RA57 TMA16 Translation machinery-associated protein 16 yes no 0 0 0 7.5 0.5 1 1 64.679 64.703 3 1.4582E-05 19835 20230619_1888_Aki_TMTPro18x_K_F8 93.92 76.22 26987 17626 23909 25718 21413 24338 20059 26861 23411 34332 32578 29199 36398 28521 26743 32667 34155 30857 24899 16216 24511 25285 22423 24765 20449 27445 24083 34115 33125 29856 36551 29678 27804 32646 32585 29339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123670000 21786 3034 20400 41106;41107 33027 33027 1 9606 Homo sapiens 0.06341942015933455 QQFHDAK Unmodified 872.41407 0.41406533 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 4.5 0.5 1 1 32.154 32.224 3 0.0070804 6481 20230619_1885_Aki_TMTPro18x_K_F5 95.099 69.362 34401 14739 50727 54860 80116 62636 55537 73040 45669 31134 61237 81361 36678 48819 68832 19423 67824 59375 31840 13843 50602 52132 79949 62953 57191 72754 47626 35188 61225 79107 39853 49809 69089 22401 64844 56003 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29505000 21787 2326 20401 41108;41109 33028 33028 1 9606 Homo sapiens -0.027245144849530334 QQFLGHMR Unmodified 1015.5022 0.50216883 3822 Q12797;Q12797-10;B8Y0L3 ASPH Aspartyl/asparaginyl beta-hydroxylase yes no 0 0 0 2.5 0.5 1 1 37.504 37.561 3 0.01123 8629 20230619_1882_Aki_TMTPro18x_K_F3 72.492 62.837 38004 26325 36638 36280 44608 46404 46260 44041 65840 43848 50378 48026 50790 36716 38405 48563 60175 51485 35097 24197 37450 35951 45762 46098 47124 45148 65270 44497 52392 48201 51222 38906 40523 48741 57304 48902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42372000 21788 3822 20402 41110;41111 33029 33029 1 9606 Homo sapiens -0.004962171659713022 QQFMTTQDASK Oxidation (M) 1299.5765 0.57651556 3326 O76038;A0A994J4C2 SCGN Secretagogin yes no 0 1 0 5 0 1 38.981 39.072 3 0.00011711 9156 20230619_1885_Aki_TMTPro18x_K_F5 115.33 105.37 29533 18492 25887 18982 19378 21167 29771 25873 30972 58133 56793 56777 66527 52442 61107 75651 68343 64287 27241 16957 26464 19194 20923 21365 29468 26959 32622 56933 57485 57570 67299 55469 62711 74968 65292 61195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41108000 21789 3326 20403 41112 33030 33030 1955 1 9606 Homo sapiens -0.06128963655783082 QQFMTTQDASK Unmodified 1283.5816 0.58160094 3326 O76038;A0A994J4C2 SCGN Secretagogin yes no 0 0 0 6 0 1 43.855 43.947 3 0.0048653 11211 20230619_1886_Aki_TMTPro18x_K_F6 81.625 56.833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21790 3326 20403 41113 33031 33031 1 9606 Homo sapiens -0.04884659793174251 QQFVEYDK Unmodified 1055.4924 0.49237523 3884 Q14257;Q14257-2;H0YL43 RCN2 Reticulocalbin-2 yes no 0 0 0 4.5 0.5 2 2 46.657 46.717 2;3 0.00071735 12461 20230619_1883_Aki_TMTPro18x_K_F4 157.68 124.84 229660 177090 200930 220980 247540 280350 259770 245480 313950 276170 332550 347340 318810 281140 292030 342030 370180 340670 212060 162530 207350 220290 253960 278160 262830 254050 317320 279720 339790 347180 324680 295290 302000 342530 353230 323690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 328440000 21791 3884 20404 41114;41115;41116;41117 33032;33033 33032 2 9606 Homo sapiens -0.03315126690381476 QQFYHSVQDLSGGSR Unmodified 1707.7965 0.79649617 132 A0A024R178;A0A0S2Z3F2;P10398;Q59HC8;B4DMG5;P10398-2 ARAF Serine/threonine-protein kinase A-Raf yes no 0 0 0 8 0 1 44.784 44.812 3 1.1135E-37 11408 20230619_1888_Aki_TMTPro18x_K_F8 235.22 213.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21792 132 20405 41118 33034 33034 1 9606 Homo sapiens -0.02909021723871774 QQGASGEVYCPSGEK Unmodified 1595.6886 0.68858521 4175 Q7Z5L9-2;Q7Z5L9;B4DSJ2;B4DTU9;Q7Z5L9-3 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes no 0 0 0 4 0 1 40.373 40.415 3 0.00040431 9741 20230619_1883_Aki_TMTPro18x_K_F4 88.108 70.307 25421 22025 30990 35442 34096 43081 38414 38210 41113 38058 46404 42291 45222 35874 39902 36322 49358 46311 23558 20265 31104 34761 35309 42836 38569 39368 41920 38605 47278 42531 45924 37268 41167 37066 47113 43892 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66025000 21793 4175 20406 41119 33035 33035 1 9606 Homo sapiens -0.08543154369453987 QQGPILTK Unmodified 883.51272 0.51271674 3823 Q12906-7;F4ZW66;Q12906-4;Q12906-6;F4ZW65 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 4.5 3.5 1 1 43.445 43.45 2 0.0003201 10869 20230619_1888_Aki_TMTPro18x_K_F8 166.68 99.646 268430 197260 243800 263430 313400 324330 315190 301410 396420 329210 360220 366110 412320 311670 312590 305100 421010 359900 247870 181200 250870 261340 320070 322820 320080 310250 397670 332500 373480 367990 414250 323210 325500 309850 401350 341480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 237350000 21794 3823 20407 41120;41121 33036;33037 33037 2 9606 Homo sapiens 0.0663008876007325 QQGTSVAQSGAQAPGR Unmodified 1541.7546 0.75463136 905 A0A090N8Z2;A8K9F5;A0A090N8H1;Q9BWE0;Q9BWE0-4;E7EVL6;C9JZE3;C9JYJ8 REPIN1 Replication initiator 1 yes no 0 0 0 5.5 0.5 1 1 31.273 31.328 3 2.8112E-08 6267 20230619_1886_Aki_TMTPro18x_K_F6 133.25 104.18 5464.7 3530.7 6090.7 6499.8 10576 9192.8 8475.6 7431.9 10979 5514.3 7166.6 6765.1 7846.4 7131.8 6886.1 3691 7984.8 5661.5 5051.2 3258.6 6202.7 6348.4 10556 9051.8 8736.2 7665.3 10875 5728.9 7558.7 6820.5 7945.9 7163 7060.1 3888.1 7613.1 5365 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31949000 21795 905 20408 41122;41123 33038 33038 1 9606 Homo sapiens 0.005424225876140554 QQGVLALRPYLQK Unmodified 1512.8776 0.87764703 2037 A8K492;P56192;B4E0E9;P56192-2;H0YHV5;A0A024RBA2 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 0 1 6 0 1 53.028 53.106 3 1.2449E-08 15298 20230619_1886_Aki_TMTPro18x_K_F6 167.71 132.96 550240 470420 555000 562160 470210 523050 591180 554230 608080 515490 497960 438230 491130 367680 590980 583440 555960 397860 508970 431390 562170 559870 498260 532670 589630 563230 613880 520760 515720 446500 505930 393000 597160 572530 531180 380430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 535270000 21796 2037 20409 41124 33039 33039 1 9606 Homo sapiens 0.14172330776818853 QQHLAFR Unmodified 898.47733 0.47733428 3961 Q2NL82;I3L1Q5 TSR1 Pre-rRNA-processing protein TSR1 homolog yes no 0 0 0 8 0 1 32.201 32.206 3 0.011173 6414 20230619_1888_Aki_TMTPro18x_K_F8 82.913 13.569 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21797 3961 20410 41125 33040 33040 1 9606 Homo sapiens 0.024034710229329903 QQHQGILSR Unmodified 1065.5679 0.56794021 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 7.5 0.5 1 1 25.882 25.945 3 0.0001259 5140 20230619_1888_Aki_TMTPro18x_K_F8 135.55 81.493 33206 24395 35555 41089 49861 58087 46108 50380 59500 29063 37196 39993 35769 30891 40766 31365 44106 40562 30703 22473 36179 40306 50596 57225 47104 51415 58862 30903 39183 39803 36808 32194 41494 32059 42144 38442 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18103000 21798 68 20411 41126;41127 33041;33042 33042 2 9606 Homo sapiens 0.037778952805638255 QQHVIETLIGK Unmodified 1264.7139 0.71393574 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 1.5 0.5 1 1 51.582 51.604 3 2.3112E-06 14994 20230619_1880_Aki_TMTPro18x_K_F1 151.55 119.02 537550 255500 488780 559070 480650 542260 501740 537060 661840 672270 661310 645040 683140 554110 561700 813100 660760 745100 495390 236870 500830 538830 500960 548950 509840 552610 665410 671330 679180 653310 690660 588340 580230 808300 631830 708110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3820699999.9999995 21799 2633 20412 41128;41129 33043;33044 33043 2 9606 Homo sapiens 0.09216733005951028 QQHVIETLIGKK Unmodified 1392.8089 0.80889876 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 1 3 0 1 49.417 49.495 4 3.9013E-05 13894 20230619_1882_Aki_TMTPro18x_K_F3 120.59 82.635 548470 374140 558700 523300 598040 517720 577340 597890 545690 602980 590280 527270 639160 407620 571440 596200 568980 516100 506710 343980 566850 516300 616160 526060 582690 605280 560050 606410 605300 534930 646550 434980 582250 591560 544050 491230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1077100000 21800 2633 20413 41130 33045 33045 1 9606 Homo sapiens 0.1282066647713691 QQIAEIEK Unmodified 957.51311 0.51311067 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q53GM6 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 3 0 1 45.192 45.268 2 0.03159 11950 20230619_1882_Aki_TMTPro18x_K_F3 78.149 25.433 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21801 1863 20414 41131 33046 33046 1 9606 Homo sapiens 0.032654636892857525 QQIANELNYSCR Unmodified 1494.6885 0.68852563 2526 E7EQI7;B4DLF2;Q53EL1;Q12768 KIAA0196 WASH complex subunit strumpellin yes no 0 0 0 6 0 1 45.794 45.88 2 0.0010347 12066 20230619_1886_Aki_TMTPro18x_K_F6 104.22 88.956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21802 2526 20415 41132 33047 33047 1 9606 Homo sapiens -0.03903109578800468 QQICNQQPPCSR Unmodified 1514.6718 0.6718297 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;A0A7P0T8C6;Q7Z2W4-3 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 0 7 0 1 32.805 32.892 2 4.6918E-05 6501 20230619_1887_Aki_TMTPro18x_K_F7 154.24 147.58 4399.8 2616.5 7852.8 6788.2 6320.3 7768.4 5288.6 5925.7 7481.2 6233 5713.2 7356 8594.9 5925.8 5389.4 4122.1 8087.5 8049.2 4087.8 2430.6 7659.4 6517.9 6660 7728.9 5467.8 6189.8 7430.2 6320.8 6078.2 7354.3 8521.3 6077.3 5677.2 4395.6 7711.8 7603.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10386000 21803 2740 20416 41133 33048 33048 1 9606 Homo sapiens -0.06491933736356259 QQIESYPTDSILEDQSDQR Unmodified 2251.024 0.024049084 3016 Q12824;Q12824-2;G5E975;Q9H836;A0A0G2JRV3 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes no 0 0 0 1 0 1 52.563 52.563 3 1.0680000000000001E-24 15407 20230619_1880_Aki_TMTPro18x_K_F1 202.6 185.58 13354 9252.7 12260 12239 12201 14452 13585 13329 16976 16220 13676 17068 15386 14793 15007 16413 18811 17989 12328 8501.1 12545 12143 12731 14416 13720 13771 16979 16267 14288 17194 15650 15415 15484 16553 17955 17072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74899000 21804 3016 20417 41134 33049 33049 1 9606 Homo sapiens -0.05142197887835209 QQIGSSAMPYK Oxidation (M) 1224.5809 0.58087266 914 P30566;A0A7P0T9A7;A0A7P0Z472;A0A096LNY6;X5D8S6;A0A1B0GTJ7;A0A1B0GWJ0;B4DP46;A0A0A6YY92;Q71UA4;A0A7P0T8E4;A0A1B0GTG9;A0A1B0GWF8;X5D2Z4;X5DP48;P30566-2;A8K4X6;B4DUM2;A0A096LPA2 ADSL Adenylosuccinate lyase yes no 0 1 0 8 0 1 40.998 40.99 3 0.013626 9909 20230619_1888_Aki_TMTPro18x_K_F8 62.408 46.183 52975 38250 59018 71578 76476 74817 76273 73986 83331 66667 80020 80027 76999 69776 77853 58107 77625 78015 48995 35293 59785 69517 77951 75359 77118 75472 84301 68201 82139 80259 78743 71701 79025 59772 74276 73887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49653000 21805 914 20418 41135 33050 33050 524 1 9606 Homo sapiens -0.022434544422367253 QQINEMHLLIQQAR Oxidation (M) 1736.8992 0.8991871 3784 Q01780-2;Q01780;B4DKG8 EXOSC10 Exosome component 10 yes no 0 1 0 7 0 1 42.035 42.108 3 1.7669E-05 10109 20230619_1887_Aki_TMTPro18x_K_F7 111.72 96.9 25283 23328 24252 30873 33269 29398 33536 33584 34203 31804 35556 27403 30934 28329 39626 30611 35021 34234 23389 21409 24893 30532 33787 29950 33814 33973 34852 32105 36181 28083 32139 29317 39837 30958 33547 32480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14816000 21806 3784 20419 41136 33051 33051 2467 1 9606 Homo sapiens 0.06021347743239858 QQIQSIQQSIER Unmodified 1456.7634 0.76340513 1527 A0A3B3IUA2;Q6FHM6;B1AHD1;P55769;A0A3B3IRU2 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 0 0 0 6.5 0.5 2 2 47.122 47.206 2;3 4.429E-15 12650 20230619_1886_Aki_TMTPro18x_K_F6 218.4 192.28 190500 152870 161430 193170 180050 208530 202220 195380 229300 208860 219850 222180 236470 189460 213480 239100 231600 235030 175910 140300 166900 191920 186310 209370 203410 200910 231650 210800 226760 223880 239660 199180 218620 239180 221440 223260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 827450000 21807 1527 20420 41137;41138;41139;41140 33052;33053 33052 2 9606 Homo sapiens 0.053293962241014015 QQISLATQMVR Oxidation (M) 1289.6762 0.67617003 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 1 0 1.5 0.5 1 1 42.562 42.601 2 0.001222 11236 20230619_1880_Aki_TMTPro18x_K_F1 96.171 76.385 92000 75828 81726 92784 104390 109170 92786 98721 125650 64385 72108 68960 65302 60542 86130 79537 72078 66118 84995 69562 84267 92510 106360 108920 95217 100650 123820 67174 76225 69595 67905 63681 86405 78902 69059 62964 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68543000 21808 2633 20421 41141;41142 33054;33055 33054 1585 2 9606 Homo sapiens 0.04291898748829226 QQISLATQMVR Unmodified 1273.6813 0.6812554 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 2.5 0.5 1 1 49.297 49.365 2 1.9566000000000002E-25 13830 20230619_1882_Aki_TMTPro18x_K_F3 228.98 181.38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21809 2633 20421 41143;41144 33056;33057 33057 2 9606 Homo sapiens 0.05536202611438057 QQKPTLSGQR Unmodified 1141.6204 0.62036971 4151 Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;Q53FN7;Q7L1Q6-2;C9IZ80;C9JFN4;C9J188;C9JWF5;C9JV57 BZW1 Basic leucine zipper and W2 domain-containing protein 1 yes no 0 0 1 3 0 1 33.549 33.615 3 0.00078977 7028 20230619_1882_Aki_TMTPro18x_K_F3 97.597 71.533 73977 38633 92913 80759 139120 174530 99289 105190 135080 9518.6 12538 11246 9534.5 8631.2 30573 6529.3 12628 8083.8 68395 35768 93448 79198 139970 167590 103460 109630 130340 15101 18535 11334 10879 8876.8 29592 6762.4 12224 7678.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66241000 21810 4151 20422 41145 33058 33058 1 9606 Homo sapiens 0.055224336235369265 QQLAEEEAR Unmodified 1072.5149 0.51490158 1616 Q27J81;Q27J81-2;A0A6Q8PHA2;A0A6Q8PH71;A0A6Q8PHG2;A0A6Q8PGN3;A0A6Q8PF44;A0A6Q8PH25;A0A6Q8PF29;A0A087X118;A0A6Q8PFW4;A0A0A0MQU1;A0A6Q8PHS8 INF2 Inverted formin-2 yes no 0 0 0 1 0 1 34.45 34.45 2 0.00043643 7753 20230619_1880_Aki_TMTPro18x_K_F1 159.1 111.25 44576 26222 57813 60555 75340 81140 51196 65185 59027 52715 85072 106350 79614 73475 75852 41077 98280 102070 41247 24304 57889 58519 76184 80053 53350 67350 60689 55563 85961 104270 81289 75189 78233 45334 93843 96290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55284000 21811 1616 20423 41146 33059 33059 1 9606 Homo sapiens -0.018455272927667465 QQLAPYSDDLR Unmodified 1304.6361 0.63607935 2781 CON__P15497 yes yes 0 0 0 3.5 0.5 1 1 46.202 46.263 2 2.7054E-30 12434 20230619_1882_Aki_TMTPro18x_K_F3 271.62 193.47 + 90423 178050 235580 104560 320130 354580 284190 267220 374910 384960 635160 904630 312630 417720 514550 350380 492560 863090 85457 162140 227790 115360 324600 337800 291550 282120 386520 398180 627300 876670 339750 443020 517720 382300 474060 812980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 599110000 21812 2781 20424 41147;41148 33060;33061 33060 2 -0.00405324650091643 QQLAQYQQQQSQASAPSTSR Unmodified 2234.0676 0.067585653 3907 Q15007;A8K489;Q6AHX7 WTAP;DKFZp686F20131 Pre-mRNA-splicing regulator WTAP yes no 0 0 0 8 0 1 39.29 39.277 3 2.1306E-37 9195 20230619_1888_Aki_TMTPro18x_K_F8 239.75 236.86 4035.1 3866 4637.8 2592.5 4190.8 4319.6 4871.9 4555 4949.1 5495.8 7840.1 4805.4 6419.4 3810.9 2823.2 5353.1 6379.6 6165.8 3739.7 3528.8 4642.1 2756 4401.4 4248.1 4878.4 4658.8 5148.8 5480.7 7817.5 4887.6 6415.5 4055.8 3144.4 5391.1 6068.1 5848.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48559000 21813 3907 20425 41149 33062 33062 1 9606 Homo sapiens -8.543600006305496E-05 QQLEAVNEAIK Unmodified 1241.6616 0.66156582 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;B3KM27 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 5 0 1 50.07 50.146 3 0.012564 13813 20230619_1885_Aki_TMTPro18x_K_F5 68.83 46.632 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21814 128 20426 41150 33063 33063 1 9606 Homo sapiens 0.050401498723203986 QQLILAR Unmodified 840.51814 0.51813647 1850 Q5U0B3;R4GMR5;V9HW09;A0A8V8TQ44;P48556;K7EJR3;A0A8V8TPK1;A0A8V8TR48;B4E2Y4;K7ENY6 PSMD8;HEL-S-91n 26S proteasome non-ATPase regulatory subunit 8 yes no 0 0 0 1.5 0.5 1 1 43.236 43.277 2 0.006446 11320 20230619_1881_Aki_TMTPro18x_K_F2 132.96 25.531 233630 174120 201680 236830 245710 271050 244420 254220 298440 259880 273970 277060 306410 227320 253140 307160 319700 287660 215670 159970 208400 234380 251860 271050 248180 261000 299960 262930 283640 278890 309010 240460 262300 306130 305030 273550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 254380000 21815 1850 20427 41151;41152 33064;33065 33065 2 9606 Homo sapiens 0.09149812342559471 QQLLIGAYAK Unmodified 1103.6339 0.63389451 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 2.5 0.5 1 1 54.535 54.57 3 0.00027285 16149 20230619_1882_Aki_TMTPro18x_K_F3 114.5 103.97 199440 163180 183710 184360 182850 212630 198270 189800 229640 164310 153480 125810 166720 129130 182790 172760 161670 133250 184290 149580 187930 184870 190570 212350 199960 194810 228990 166420 161520 129750 170430 135440 184360 170740 154690 127080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1941899999.9999998 21816 4005 20428 41153;41154 33066 33066 1 9606 Homo sapiens 0.08622291402753035 QQLPEQPFEK Unmodified 1242.6245 0.62445203 3589 P46087;P46087-4;P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 5 0 1 49.313 49.389 3 0.0024342 13482 20230619_1885_Aki_TMTPro18x_K_F5 81.923 58.687 80702 74312 81544 85456 90976 100820 91472 95103 116810 110390 100680 101390 115250 89784 100450 120790 115510 110660 74688 68105 82931 85604 93803 100670 92987 97929 116970 110490 104690 102960 116420 94672 103350 120260 110340 105230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70272000 21817 3589 20429 41155 33067 33067 1 9606 Homo sapiens 0.01284478326556382 QQLPQTPPSCLK Unmodified 1395.718 0.71803484 2518 B4DKU3;Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 0 0 0 1 0 1 47.209 47.209 3 0.00014512 13184 20230619_1880_Aki_TMTPro18x_K_F1 105.17 77.841 48370 32901 37719 44160 49018 51136 53916 54647 53551 51877 43857 46006 59394 47269 45185 67755 59059 58844 44598 30235 39415 43755 50142 51255 54050 55494 54232 52398 46147 47052 59450 49810 47087 67187 56371 55986 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31797000 21818 2518 20430 41156 33068 33068 1 9606 Homo sapiens 0.03600454437332701 QQLSAEELDAQLDAYNAR Unmodified 2033.9654 0.96541199 4189 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 0 0 3.5 1.12 1 1 1 1 56.931 56.96 3 3.4904E-49 17364 20230619_1881_Aki_TMTPro18x_K_F2 288.41 229.78 197150 165250 193210 194800 185980 233450 224220 204790 243330 225180 215340 211960 243730 196960 230070 250160 227700 248340 182290 151530 196560 194830 195000 232430 224410 211770 245710 226160 223520 215330 247130 206550 234180 250370 218030 235810 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1557499999.9999998 21819 4189 20431 41157;41158;41159;41160 33069;33070;33071;33072 33069 4 9606 Homo sapiens -0.010212096716486485 QQLSSEQVSR Unmodified 1160.5786 0.57856447 430 A0A024R753;Q9NW13;Q9NW13-2 RBM28 RNA-binding protein 28 yes no 0 0 0 3.5 0.5 1 1 33.059 33.123 2 1.5206E-07 6801 20230619_1882_Aki_TMTPro18x_K_F3 192.12 141.41 31800 14290 38540 45238 70069 91077 54232 64676 54925 44187 62857 80010 65040 58256 55304 32367 76162 71049 29373 13357 39128 43635 69944 87886 55639 67297 56203 46859 64326 78754 65878 59459 57421 35193 72635 67091 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37863000 21820 430 20432 41161;41162 33073;33074 33073 2 9606 Homo sapiens 0.004698331443250936 QQLSSLITDLQSSISNLSQAK Unmodified 2260.1911 0.19105483 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 5 0 1 66.608 66.651 3 1.0252E-11 20860 20230619_1885_Aki_TMTPro18x_K_F5 134.29 123.5 6197.1 4194.7 5369.9 4828.7 4496.9 5639.3 6148.7 5884.1 7422.7 5738.6 6575.7 4775.3 4780 4370.3 6376.7 5564.6 5394.2 5133.3 5717.8 3849 5508.7 4838.6 4793.2 5645.3 6142.6 5989.4 7445.9 5781.4 6698.2 4885.3 5012.7 4583.7 6397.7 5551.6 5168.8 4881.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16591000 21821 349;3906 20433 41163 33075 33075 1 9606 Homo sapiens 0.11136694727747454 QQLTNTEVR Unmodified 1087.5622 0.56218613 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YFD1;Q6PEK6;H7C141 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 4 0.816 1 1 1 34.686 34.753 2 4.7574E-08 7413 20230619_1883_Aki_TMTPro18x_K_F4 199.89 145.92 64610 38559 66070 81169 102490 112570 97850 107980 123330 70257 109200 129380 101500 97602 107860 50248 128020 126390 59653 35677 67651 78777 103480 111240 99687 109600 123390 74898 112520 127440 104230 99247 110340 55718 122280 119250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 87096000 21822 2865 20434 41164;41165;41166 33076;33077 33077 2 9606 Homo sapiens 0.02190751978218941 QQLVASHLEK Unmodified 1151.6299 0.62987176 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4H4;A0A7I2V4Y9;B3KTX4;A8K8J9;F8W1I6;H0YI98;A0A7I2V390;F8VW18 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 0 0 7.5 0.5 1 1 42.208 42.246 3 4.8502E-06 10166 20230619_1887_Aki_TMTPro18x_K_F7 161.94 98.727 275270 215840 254270 289200 294650 324810 318850 300830 374900 312910 357890 345460 350970 279530 324000 393530 388890 359740 254300 198230 260890 286400 303610 325150 321740 309380 377840 316700 367600 347220 357090 296550 333900 391520 371260 342140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 411600000 21823 1406 20435 41167;41168 33078;33079 33078 2 9606 Homo sapiens 0.06012201909038595 QQLVETHLAR Unmodified 1193.6517 0.65166983 255 B4DTV1;B4E3I5;A0A024R3N3;A0A140VJE9;Q06481-5;Q06481-4;Q06481-2;Q06481-3;Q06481-6;Q06481 APLP2 Amyloid-like protein 2 yes no 0 0 0 7 0 1 37.843 37.907 3 8.783299999999999E-21 8434 20230619_1887_Aki_TMTPro18x_K_F7 227.27 180.27 74796 57597 70905 80041 80675 81894 87066 80939 105470 90727 108510 91962 101490 82970 88593 110410 114860 92617 69107 52923 72551 78989 83168 82654 87967 83043 106450 91243 110740 93107 103190 87319 91877 109450 109480 88238 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82814000 21824 255 20436 41169 33080;33081 33080 2 9606 Homo sapiens 0.06259006657614918 QQLVETHMAR Oxidation (M) 1227.603 0.60300508 1165 A0A218KGR2;P05067;P05067-8;P05067-11;E9PG40;A0A140VJC8;P05067-4;A0A0A0MRG2;P05067-9;P05067-7;P05067-6;P05067-10;B4DGD0;B4DJT9;B4DQM1;H7C0V9;B4DM00;P05067-3;P05067-5;B4DMD5 APP Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes no 0 1 0 5.5 0.5 1 1 30.773 30.827 3 0.0016707 5889 20230619_1885_Aki_TMTPro18x_K_F5 84.06 56.962 34387 17904 34865 40884 45238 48094 39439 44649 54505 32876 41086 33673 32679 32363 36060 22611 48007 29356 31728 16602 35565 39440 46024 47962 40570 45523 54057 33927 42369 34114 33831 32902 37183 23311 45688 27879 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54968000 21825 1165 20437 41170;41171 33082 33082 715 1 9606 Homo sapiens -0.0016922997381243476 QQMFEFDTK Unmodified 1172.5172 0.51720977 2291 Q5LJB0;B2RB07;Q9Y5K5-2;Q9Y5K5-4;Q9Y5K5-3;Q9Y5K5;Q5LJA5;Q5LJA9;H0Y6Y4;B4DW59;B7Z9U9 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes no 0 0 0 6 0 1 54.958 55.034 3 0.00012925 16032 20230619_1886_Aki_TMTPro18x_K_F6 104.22 90.794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21826 2291 20438 41172 33083 33083 1 9606 Homo sapiens -0.062148148793085056 QQMLENQMEVR Oxidation (M) 1420.6439 0.64388362 2337;3778;3779 Q01082;B2ZZ89;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 1 0 3 0 1 39.217 39.271 2 0.041444 9294 20230619_1882_Aki_TMTPro18x_K_F3 64.04 50.046 11276 7809.3 13477 10838 14844 14651 14670 13252 17555 16529 18011 19766 16546 15520 14434 17972 20856 22159 10433 7178.7 13510 10749 15289 14496 14890 13724 17737 16630 18402 19767 16850 16277 15089 18244 19902 20997 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16829000 21827 2337;3778;3779 20439 41173 33084 33084 1453 1 9606 Homo sapiens -0.04961256716501339 QQMLENQMEVR Unmodified 1404.649 0.648969 2337;3778;3779 Q01082;B2ZZ89;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 3.5 0.5 1 1 45.78 45.84 2 1.4832E-05 12098 20230619_1883_Aki_TMTPro18x_K_F4 167.12 108.54 42577 33118 40523 42961 38846 53099 54200 50983 68058 62160 57154 66411 73936 62507 52358 80615 81398 92935 39342 30407 41350 42707 40996 52842 54158 52526 68120 62377 59928 67090 73940 65590 55382 81309 77680 88098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48745000 21828 2337;3778;3779 20439 41174;41175 33085 33085 1 9606 Homo sapiens -0.037169528538697705 QQMLEQHLQDVR Unmodified 1523.7515 0.75146023 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2YQI1;A0A7I2V4R2;B7ZA24;P40763-3;P40763-2;A0A7I2YQD2;A0A7I2V4R3;A0A7I2V395;A0A7I2V2G1;A0A7I2V4F6;A0A7I2V2T1;B5BTZ6 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 0 0 5 0 1 43.9 43.979 3 4.5519E-06 11153 20230619_1885_Aki_TMTPro18x_K_F5 141.34 119.6 35057 22416 28315 34620 34847 40313 38118 39151 49312 34265 38776 40505 41389 32672 38447 43301 39692 40353 32320 20639 29466 34010 35816 40281 38574 39945 49131 35107 40406 40589 42008 34523 39244 43164 37969 38356 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93165000 21829 1660 20440 41176 33086 33086 1 9606 Homo sapiens 0.01053456209228898 QQMQDFFLAHKDEEWFR Unmodified 2254.0266 0.026572462 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5 SRRT Serrate RNA effector molecule homolog yes no 0 0 1 7.5 0.5 1 1 60.262 60.303 4 6.858E-09 17907 20230619_1888_Aki_TMTPro18x_K_F8 130.77 112.41 119500 89384 91939 113650 65284 96930 91345 77833 125030 122110 104390 112050 118250 109720 124650 129510 101020 113140 110230 82062 95436 112510 70954 98805 91614 82120 124680 120800 108760 114070 120590 114250 125370 128910 96967 107590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71813000 21830 4464 20441 41177;41178 33087 33087 1 9606 Homo sapiens -0.05027976173232673 QQNELAELHANLAR Unmodified 1605.8223 0.82231699 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 5 0.816 1 1 1 44.862 44.932 3 3.0735E-29 11589 20230619_1885_Aki_TMTPro18x_K_F5 260.5 202.23 217220 153030 168590 194080 193620 223850 230540 208630 267580 210860 228550 219350 225970 180430 238400 235190 253600 217270 200310 140530 175870 192980 200360 223710 231320 214310 268730 213360 236210 221070 231260 190320 243000 234490 242250 206690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 977330000 21831 349;3906 20442 41179;41180;41181 33088;33089 33089 2 9606 Homo sapiens 0.04363872518433709 QQNFNTGIK Unmodified 1048.5302 0.53015772 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4.5 3.5 1 1 43.083 43.088 2 4.7018E-08 11457 20230619_1880_Aki_TMTPro18x_K_F1 232.97 147.15 148560 109600 139380 142950 167670 175230 166520 166820 230530 183670 218370 225720 215470 169690 187040 204950 255230 230970 137220 100660 142790 142040 171940 174560 169920 171440 230560 186080 224490 225320 218640 178820 194540 206790 243370 219190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100190000 21832 1022;3868 20443 41182;41183 33090;33091 33090 2 9606 Homo sapiens 0.007833842950731196 QQNISMQR Unmodified 1003.4869 0.48691269 1588 Q15154;Q15154-5;H0YBA1;D3DSQ0;A0A5H1ZRS1;B9EIS5;A2RUU9;Q15154-2;Q15154-4;A0A4W8VX11;Q9P1R8 PCM1 Pericentriolar material 1 protein yes no 0 0 0 7 0 1 32.737 32.824 2 0.0026268 6464 20230619_1887_Aki_TMTPro18x_K_F7 123.72 73.594 9863.3 6110.6 11236 14887 13881 19439 10794 15588 15365 8642.7 12725 17177 13383 11051 12330 6482.8 17143 12480 9117 5667.9 11364 14345 14166 19191 11217 15998 15265 9374.3 13237 16820 13591 11363 12786 6946.2 16324 11807 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9560600 21833 1588 20444 41184 33092 33092 1 9606 Homo sapiens -0.014691287538425968 QQNLPVTR Unmodified 954.52468 0.52467841 1657 Q8WVM8;A0A7I2V4B8;A0A7I2V5Z4;A0A7I2V3B4;A0A7I2V5I2;Q53GW1;Q8WVM8-2;Q8WVM8-3;A0A7I2V320;A0A7I2V4U2;A0A7I2V3G4;A0A7I2V4R0;B7Z738;B7Z5N7;A0A7I2V448;G3V2M8;A0A7I2V2U5 SCFD1 Sec1 family domain-containing protein 1 yes no 0 0 0 7 0.816 1 1 1 34.706 34.744 2 0.0065544 7187 20230619_1887_Aki_TMTPro18x_K_F7 110.22 87.832 71740 49762 66514 80934 94893 97022 85539 85665 118770 68092 78955 98819 77329 65713 78205 58727 95076 85315 66233 45832 68508 79309 96079 96596 87763 87853 117370 70780 82948 97692 79053 68522 80321 60689 90738 80787 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 65773000 21834 1657 20445 41185;41186;41187 33093;33094 33094 2 9606 Homo sapiens 0.04559705503288569 QQNQELQEQLR Unmodified 1412.7008 0.70080487 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;K4DIE0;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 2.5 0.5 2 2 38.425 38.483 2;3 9.6876E-07 9108 20230619_1881_Aki_TMTPro18x_K_F2 197.21 140.95 82511 64080 76439 89185 103260 113820 90852 94132 121670 100790 120230 129650 129810 113520 95007 140490 154420 148790 76225 58879 78632 88270 104870 112750 93274 97702 122090 102450 123850 129810 130620 119030 100750 141060 147130 141260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 271360000 21835 349;3906 20446 41188;41189;41190;41191 33095;33096 33095 2 9606 Homo sapiens 0.010962501558879012 QQNRPSVITCASAGAR Unmodified 1714.8533 0.85329954 794 Q0H0I7;E7EWF5;G5E9M9;A0A075B6E4;A0A0A6YYI5;G5E9M7;Q14135-5;Q14135-6;Q14135-2;Q14135;Q14135-4;E7ERW0;E7EQU6 VGLL4 Transcription cofactor vestigial-like protein 4 yes no 0 0 1 4.5 0.5 1 1 33.058 33.127 3 0.00037656 6780 20230619_1883_Aki_TMTPro18x_K_F4 135.02 124.1 18676 15567 19191 17616 32401 35804 25016 21728 24471 23003 20863 20070 24960 19815 17502 30600 27577 22690 17275 14269 19643 17853 32405 34502 25622 23196 24843 23110 21744 20523 24995 21015 18555 30093 26254 21653 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23397000 21836 794 20447 41192;41193 33097;33098 33097 2 9606 Homo sapiens 0.02446702561019265 QQPDTEAVLNGK Unmodified 1298.6466 0.64664404 2938 E9PMI6;J3KN38;P54105;E9PJF4;E9PQ83 CLNS1A Methylosome subunit pICln yes no 0 0 0 4 0 1 45.636 45.68 3 0.00046734 12011 20230619_1883_Aki_TMTPro18x_K_F4 94.191 78.652 52214 46209 53357 56658 63322 98797 86293 56447 67473 63398 105480 63356 64655 54968 59320 65511 68763 66639 48314 42381 54343 56864 65754 95651 85025 60844 71168 63754 104350 64208 67004 57540 60976 65712 65686 63289 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32605000 21837 2938 20448 41194 33099 33099 1 9606 Homo sapiens 0.009266580043231443 QQPLFVSGGDDYK Unmodified 1452.6885 0.68850885 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ITV3;A0A3B3ISK1;A0A3B3IS23;A0A3B3ITX2 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 5.33 0.471 2 1 52.148 52.223 2;3 7.2562E-11 14857 20230619_1886_Aki_TMTPro18x_K_F6 174.39 160.71 80262 68004 76554 82076 80358 90324 93579 90167 101140 103910 94417 103960 116290 87261 88777 124160 100180 115160 74204 62371 78176 81851 83537 90711 93810 92495 102410 104260 98192 104970 116610 92557 91590 123560 95842 109420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 341590000 21838 3647 20449 41195;41196;41197 33100;33101 33101 2 9606 Homo sapiens -0.019727863071466345 QQPMALAVALTK Unmodified 1269.7115 0.7114929 532 A0A024R8Q1;P10253 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase yes no 0 0 0 3.5 0.5 1 1 60.783 60.799 3 0.0016355 18768 20230619_1882_Aki_TMTPro18x_K_F3 81.494 59.346 19268 14473 17799 18676 15793 18905 19202 19170 24544 17122 16785 19090 18754 14739 19279 19306 21404 20702 17796 13289 18180 18520 16678 19100 19326 19516 24370 17485 17693 19140 19102 15595 19711 19405 20453 19651 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30374000 21839 532 20450 41198;41199 33102 33102 1 9606 Homo sapiens 0.08742561276585548 QQPMIYICGECHTENEIK Unmodified 2248.9915 0.99150886 570 A0A024R9G0;P53803;E5RGX2 POLR2K DNA-directed RNA polymerases I, II, and III subunit RPABC4 yes no 0 0 0 5 0 1 49.937 50.013 3 2.9445E-07 13755 20230619_1885_Aki_TMTPro18x_K_F5 120.9 112.08 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21840 570 20451 41200 33103 33103 1 9606 Homo sapiens -0.08302723087672348 QQPNPGNELCYK Unmodified 1446.6562 0.65616287 307 A0A024R4U3;Q14166;Q9BR23 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 6 0 1 44.966 45.055 3 6.4625E-05 11719 20230619_1886_Aki_TMTPro18x_K_F6 117.95 97.285 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21841 307 20452 41201 33104 33104 1 9606 Homo sapiens -0.04929896981798265 QQPPAVQFVPPLPEWK Unmodified 1859.9934 0.99340506 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5QJR3;A0A8I5KV76;A0A8I5KSH0;A0A8I5KVZ4;R4GMP9;A0A8I5KSI8 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 0 2 0 1 63.144 63.153 3 0.0032444 20051 20230619_1881_Aki_TMTPro18x_K_F2 70.197 56.997 234080 195460 237880 266070 341060 327520 303080 280020 256590 180460 188190 172480 182930 138280 198530 176370 213760 177100 216500 179500 243010 263580 344500 325480 306260 286780 261200 187570 196090 174450 187540 145880 202300 176740 204130 168340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119670000 21842 1785 20453 41202 33105 33105 1 9606 Homo sapiens 0.09780809837025117 QQPPEPEWIGDGESTSPSDK Unmodified 2182.9655 0.96547157 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;A0A0G2JIC2;B4DNU2;A0A0G2JJB9;A0PJ72 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 3 0.816 1 1 1 52.157 52.2 3 2.7913E-16 15411 20230619_1881_Aki_TMTPro18x_K_F2 159.26 150.62 55592 48901 50018 54553 43643 54797 50404 62736 55292 79368 70829 64092 78702 59316 59787 80560 71608 75353 51386 44810 51209 54658 46088 55574 50645 63933 56795 78792 72216 65618 79121 62514 61898 80257 68425 71612 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 178540000 21843 1296 20454 41203;41204;41205 33106;33107 33106 2 9606 Homo sapiens -0.07869254462320896 QQPTQFINPETPGYVGFANLPNQVHR Unmodified 2951.4678 0.46783882 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;C9J938;C9JB25;C9IZU3;C9JZI2;F8WB65;C9JFT1;A0A1B0GXJ2;C9JT15;C9JSE7 SEPT2 Septin-2 yes no 0 0 0 2.5 0.5 1 1 58.703 58.724 3 1.6188E-49 18074 20230619_1881_Aki_TMTPro18x_K_F2 232.82 225.54 45378 46545 41658 43283 42776 57038 51161 44222 58669 67186 57340 69232 72010 51793 56752 79215 66906 64711 41998 42565 42671 44184 44661 56351 51311 46686 59367 66725 59607 69559 72249 55468 58662 78283 63902 61625 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 612630000 21844 3910 20455 41206;41207 33108;33109 33108 2 9606 Homo sapiens 0.07016360944498956 QQQAAPNLR Unmodified 1024.5414 0.5413911 3897 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 0 0 0 6.5 0.5 1 1 31.843 31.906 2 4.1688E-05 6067 20230619_1887_Aki_TMTPro18x_K_F7 165.11 111.94 23079 13568 29407 30473 41418 48355 34268 39901 33490 24097 42862 47082 40256 34076 42119 21927 45847 39674 21352 12570 29538 29578 41874 47295 34968 40907 34484 25904 43461 46289 41249 34945 42884 23297 43787 37517 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29737000 21845 3897 20456 41208;41209 33110;33111 33111 2 9606 Homo sapiens 0.030102063892172737 QQQDEAYLASLR Unmodified 1420.6947 0.69465686 4333 Q96CS3 FAF2 FAS-associated factor 2 yes yes 0 0 0 3.5 0.5 1 1 48.913 48.971 2 1.0757E-17 13681 20230619_1882_Aki_TMTPro18x_K_F3 234.3 162.96 95607 80169 91214 89936 84251 106220 105520 101940 119750 126450 131460 128840 129610 102500 120900 126830 134450 137680 88386 73480 92937 90277 88756 106070 105610 105080 121670 126530 134220 129780 131880 107940 123870 127660 128530 130640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174570000 21846 4333 20457 41210;41211 33112 33112 1 9606 Homo sapiens 0.0011373192437531543 QQQDFSASSTTILDEEPIVNR Unmodified 2377.1397 0.13974754 3252 O43290;B4DDH9 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 0 3 0 1 56.822 56.859 3 1.2015000000000001E-30 17156 20230619_1882_Aki_TMTPro18x_K_F3 215.06 200.14 11444 10407 10369 10752 13312 15243 11666 12006 14775 14692 11813 13420 11436 10786 11852 14414 16527 14157 10581 9529.3 10669 10892 13563 15002 11954 12555 14771 14669 12256 13582 11720 11401 12316 14404 15751 13458 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56409000 21847 3252 20458 41212 33113 33113 1 9606 Homo sapiens 0.006263259630486573 QQQEEDEQETAALLEEAR Unmodified 2115.9556 0.95563517 4454 Q9BW85 CCDC94 Coiled-coil domain-containing protein 94 yes yes 0 0 0 1 0 1 54.255 54.255 3 6.4972E-14 16116 20230619_1880_Aki_TMTPro18x_K_F1 158.65 142.51 12475 10491 10091 14012 11902 12712 14013 11484 14207 12800 14691 13141 14833 11242 15624 14305 16133 14729 11519 9632.7 10501 13835 12276 12925 14004 11866 14475 12880 15051 13269 15162 11828 15894 14354 15421 13990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45112000 21848 4454 20459 41213 33114 33114 1 9606 Homo sapiens -0.05770442467655812 QQQEEEDLNLEDRGEETVLGGGTR Unmodified 2701.2427 0.24270907 4060 Q5T3I0;Q5T3I0-3;A8KAG1 GPATCH4 G patch domain-containing protein 4 yes no 0 0 1 1 0 1 49.439 49.439 3 6.2939E-20 14150 20230619_1880_Aki_TMTPro18x_K_F1 165.32 146.29 15617 13298 9990.3 14704 11696 13241 14098 13375 13034 17470 14239 14675 16233 13932 17054 18023 15996 16404 14401 12186 10672 14713 12090 13509 14040 13769 13415 17343 14650 14997 16543 14613 17274 17953 15318 15596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20919000 21849 4060 20460 41214 33115 33115 1 9606 Homo sapiens -0.03986258106988316 QQQELFAK Unmodified 990.51345 0.51344502 3782 Q658N3;Q53F47;Q01658 DKFZp666G145;DR1 Protein Dr1 yes no 0 0 0 6.5 0.5 1 1 46.595 46.681 3 0.0042161 12398 20230619_1886_Aki_TMTPro18x_K_F6 93.551 57.933 101400 80227 90868 97392 108130 112030 115840 101780 146670 115350 120060 122320 122400 104260 118620 129490 132120 128000 93658 73604 93482 97137 111170 111970 117230 105090 146530 116150 124560 123260 124700 109470 121490 129610 126250 121600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88144000 21850 3782 20461 41215;41216 33116;33117 33116 2 9606 Homo sapiens 0.017808834091511017 QQQEQLLK Unmodified 1013.5506 0.55055881 1307 P48634;A0A1U9X982;A0A1U9X9A9;A0A1U9X999;A0A1U9X998;A0A1U9X993;A0A1U9X988;A0A1U9X996;A0A1U9X985;A0A1U9X977;A0A1U9X975;A0A1U9X974;A0A1U9X9A5;A0A1U9X987;A0A1U9X972;P48634-3;P48634-2;P48634-4 PRRC2A Protein PRRC2A yes no 0 0 0 5 0 1 42.739 42.822 2 1.8067E-07 10693 20230619_1885_Aki_TMTPro18x_K_F5 157.68 86.176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21851 1307 20462 41217 33118 33118 1 9606 Homo sapiens 0.04432554954917123 QQQFENLDQQLR Unmodified 1545.7536 0.75356872 2353 Q53GG3;B3KN57;B3KML1;O60749;O60749-2 SNX2 Sorting nexin-2 yes no 0 0 0 4 0 1 48.565 48.602 2 1.0571E-09 13367 20230619_1883_Aki_TMTPro18x_K_F4 188.28 160.26 18852 20793 18400 20975 36971 21653 23127 24980 28621 23406 27158 29497 28397 32890 28101 33050 32200 34511 17466 19024 18996 21191 36419 21985 24290 25244 28793 23939 28007 29795 28995 33781 28835 33281 30785 32755 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58129000 21852 2353 20463 41218 33119 33119 1 9606 Homo sapiens 0.0025220821871698718 QQQLLNEENLR Unmodified 1383.7106 0.71064128 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q96T67;Q5T9A4;Q5T9A4-3;H0Y2W2;Q5T9A4-2 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B yes no 0 0 0 3.5 0.5 1 1 44.363 44.421 2 2.7054E-30 11473 20230619_1883_Aki_TMTPro18x_K_F4 271.62 196.41 136620 104100 123150 147760 139880 168590 177870 164920 192340 173950 183270 181070 210360 158910 173860 194230 195820 191360 126170 95681 126680 145840 145120 168730 177500 169010 194710 175570 189620 182790 211970 166610 178750 194400 187110 181800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162810000 21853 4603 20464 41219;41220 33120;33121 33121 2 9606 Homo sapiens 0.03413438161283011 QQQNSNIFFLADR Unmodified 1579.7743 0.77430417 3182 L0R819;U3KQP1 ASNSD1 yes no 0 0 0 8 0 1 56.587 56.644 2 3.1557E-26 16420 20230619_1888_Aki_TMTPro18x_K_F8 244.95 187.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21854 3182 20465 41221 33122 33122 1 9606 Homo sapiens 0.007607985983668186 QQQQQQQEQLYK Unmodified 1575.7641 0.76413341 4040 Q5JSZ5;Q5JSZ5-5 PRRC2B Protein PRRC2B yes no 0 0 0 5 0 1 39.637 39.727 3 5.6729E-05 9399 20230619_1885_Aki_TMTPro18x_K_F5 116.84 101.86 22911 13032 19275 20561 21785 23360 20794 28322 34813 19335 25521 27827 25064 22285 17991 29823 37468 29021 21117 12010 19925 20180 22436 23509 21468 28328 34241 20300 26600 27698 25296 23554 19555 29766 35603 27603 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18140000 21855 4040 20466 41222 33123 33123 1 9606 Homo sapiens -0.0007180912684816576 QQQTVFIHPNSSLFEQQPR Unmodified 2283.1396 0.13962838 3272 Q5SQH4;O60231;A0A1U9X7L7;A0A1U9X7L6;B4DZ28;Q9P186;Q5SQH5;A0A140T8Y5 DBP2;DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 0 0 0 1 0 1 50.581 50.581 3 4.6217E-15 14634 20230619_1880_Aki_TMTPro18x_K_F1 164.59 149.67 16837 13776 15879 20878 15860 20626 18007 19121 20877 23721 20033 22083 24954 17325 19116 24775 22152 25493 15562 12668 16244 20480 16563 20826 18125 19761 21100 23669 20818 22322 25010 18444 19741 24797 21189 24193 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29791000 21856 3272 20467 41223 33124 33124 1 9606 Homo sapiens 0.04938415544347663 QQREDITQSAQHALR Unmodified 1779.8976 0.8976072 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;Q59GP7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 1 6 0 1 34.143 34.189 4 5.906000000000001E-25 7289 20230619_1886_Aki_TMTPro18x_K_F6 229.23 203.08 23589 27735 28441 21118 32682 19830 24574 30583 21734 21896 24378 19967 21882 16986 19539 20566 29462 21052 21909 25319 28480 21919 33241 20471 25199 30244 22423 22510 24749 20279 22300 17821 20459 20635 28035 20021 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35317000 21857 3823 20468 41224 33125 33125 1 9606 Homo sapiens 0.03885429978845423 QQRPVPESQLLPGQR Unmodified 1731.938 0.93801545 2023 A8K379;P07948;E5RJ37 LYN Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lyn yes no 0 0 1 4.5 3.5 1 1 39.726 39.721 3 3.4986E-11 9930 20230619_1880_Aki_TMTPro18x_K_F1 166.79 148.12 126940 98421 118680 139960 135960 156260 125980 124240 137250 130140 154740 153080 130010 129270 144140 138970 166350 156380 117270 90456 121630 138050 139670 155990 127990 129350 139850 131940 156880 153570 134290 134570 147520 140510 158870 148380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 141240000 21858 2023 20469 41225;41226 33126;33127 33126 2 9606 Homo sapiens 0.10132396369272101 QQSAQSQVSTTAENK Unmodified 1605.7594 0.75944196 4491;3802 Q05CW7;Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 no no 0 0 0 4 0 1 36.524 36.569 3 3.1028E-05 8143 20230619_1883_Aki_TMTPro18x_K_F4 104.95 92.978 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21859 3802;4491 20470 41227 33128 33128 1 9606 Homo sapiens -0.019207380602438207 QQSEEDLLLQDFSR Unmodified 1706.8111 0.81114318 2745 C9JA28;Q9UNL2;Q9UNL2-2 SSR3 Translocon-associated protein subunit gamma yes no 0 0 0 2 0.816 2 2 2 60.589 60.602 2;3 4.3201E-48 18710 20230619_1880_Aki_TMTPro18x_K_F1 315.29 285.96 123590 94784 106390 115280 108330 137420 135510 130300 149980 134190 130050 135910 156860 118310 131000 163000 143470 154670 114100 86972 109630 115030 113280 137060 135460 133710 151170 135490 135580 137340 157930 125040 134530 162510 137230 146960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 657180000 21860 2745 20471 41228;41229;41230;41231;41232;41233 33129;33130;33131 33129 3 9606 Homo sapiens -0.013989943664000748 QQSEISAAVER Unmodified 1216.6048 0.60477922 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DQN8 PRRC2C Protein PRRC2C yes no 0 0 0 2.5 0.5 1 1 38.455 38.513 2 5.8865E-12 8995 20230619_1882_Aki_TMTPro18x_K_F3 204.17 166.45 72217 58669 63175 69112 73675 83481 78089 72325 102320 78588 91895 89452 94703 75296 72198 101070 101550 98212 66705 53804 65128 69123 75893 83073 79195 74845 102360 79483 94843 89894 95495 79512 75590 100900 96853 93325 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79510000 21861 2894 20472 41234;41235 33132;33133 33133 2 9606 Homo sapiens 0.005141023158103053 QQSELQSQVR Unmodified 1201.6051 0.60511357 157 A0A024R1S8;Q14847;Q14847-2;C9J9W2;B4DIC4;B4DJI4 LASP1 LIM and SH3 domain protein 1 yes no 0 0 0 3.5 0.5 1 1 33.763 33.822 2 1.0601E-09 7064 20230619_1883_Aki_TMTPro18x_K_F4 228.2 177.17 59774 42824 73666 65377 107130 117990 88071 90482 111250 81922 106870 113360 105970 82540 101780 60655 126660 117300 55335 39405 74134 64824 108120 114640 90618 94062 111750 84270 109860 112510 107950 85109 104700 64611 120880 110840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 145610000 21862 157 20473 41236;41237 33134;33135 33135 2 9606 Homo sapiens 0.01237522035648908 QQSHFAMMHGGTGFAGIDSSSPEVK 2 Oxidation (M) 2637.1588 0.1587852 3929 Q15365;Q53SS8 PCBP1 Poly(rC)-binding protein 1 yes no 0 2 0 6 0 1 42.94 43.034 4 1.1723E-10 10787 20230619_1886_Aki_TMTPro18x_K_F6 121.1 110.41 42062 30050 37667 48088 56514 41518 49360 45515 41876 48253 49525 42448 48296 34448 40614 48304 39111 53438 38829 27668 38950 46963 56834 42611 49948 46319 43441 48413 50350 43114 48907 36580 41401 48575 37535 50649 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159120000 21863 3929 20474 41238 33136 33136 2602;2603 1 9606 Homo sapiens -0.09430784009282434 QQSHFAMMHGGTGFAGIDSSSPEVK Oxidation (M) 2621.1639 0.16387058 3929 Q15365;Q53SS8 PCBP1 Poly(rC)-binding protein 1 yes no 0 1 0 7 0 1 45.457 45.543 4 2.3475999999999997E-19 11553 20230619_1887_Aki_TMTPro18x_K_F7 146.39 130.62 55853 43705 61598 58344 55177 63651 58517 62072 56851 57423 61864 62294 64444 50799 58534 62556 59947 69588 51676 40138 61977 57794 57901 63907 58807 63394 58226 58412 63358 62640 65374 53430 59730 63054 57410 65985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 330570000 21864 3929 20474 41239 33137 33137 2602;2603 1 9606 Homo sapiens -0.0818648014660539 QQSHFAMMHGGTGFAGIDSSSPEVK Unmodified 2605.169 0.16895596 3929 Q15365;Q53SS8 PCBP1 Poly(rC)-binding protein 1 yes no 0 0 0 7.5 0.5 1 1 48.281 48.357 4 1.0594999999999999E-19 12816 20230619_1888_Aki_TMTPro18x_K_F8 156.88 143.15 145490 97075 131170 146390 111560 150700 147560 143750 152320 181990 153610 165260 159440 139810 152200 169760 154780 187880 134270 89339 134270 143770 118620 151780 146870 148370 155140 181300 157910 167550 162220 146680 155150 171070 148290 178130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 512080000 21865 3929 20474 41240;41241 33138;33139 33139 2 9606 Homo sapiens -0.06942176284019297 QQSIAGSADSKPIDVSR Unmodified 1757.8908 0.89079049 1746 A0A8C8MUD1;Q12904;Q12904-2;A0A8C8KIA0;A0A804HJ47;A0A5F9ZHC5 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 0 1 6.5 0.5 1 1 41.976 42.059 3 1.7315999999999998E-59 10353 20230619_1886_Aki_TMTPro18x_K_F6 305.35 283.01 88939 67774 79970 81666 89003 98709 92502 89555 124570 106570 111700 126240 140020 115810 106780 150240 145270 148420 82135 62184 82129 81565 91909 98319 94037 92583 124560 107450 116510 126940 140460 121620 111530 150190 138640 140980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 310810000 21866 1746 20475 41242;41243 33140 33140 1 9606 Homo sapiens 0.04216072307599461 QQTDIAVNWAGGLHHAK Unmodified 1844.9282 0.92817905 2659 Q6IT96;B5BU61;Q13547;Q5TEE2;B4DSK9;B7Z3S4 HDAC1 Histone deacetylase;Histone deacetylase 1 yes no 0 0 0 8 0 1 45.767 45.805 4 0.00021844 11835 20230619_1888_Aki_TMTPro18x_K_F8 88.133 71.639 58488 47175 57475 52265 52574 61658 60043 67221 72299 49631 51156 52636 50402 39150 47021 54965 55053 50449 54070 43240 58368 52531 55243 61759 60506 67787 72043 51210 53458 52864 51298 41672 48359 54705 52565 47982 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42266000 21867 2659 20476 41244 33141 33141 1 9606 Homo sapiens 0.0395120836390106 QQTDMAVNWAGGLHHAK Oxidation (M) 1878.8795 0.87951429 4305 Q92769;Q92769-3;B3KUJ5;H3BM24 HDAC2 Histone deacetylase 2;Histone deacetylase yes no 0 1 0 8 0 1 41.402 41.399 4 1.234E-13 10027 20230619_1888_Aki_TMTPro18x_K_F8 163.8 131.65 95855 78201 97245 92637 104460 97875 102720 98302 112720 120960 118590 104450 133370 96882 111680 130930 123840 117730 88643 71719 98723 92477 107750 98654 104010 101000 114600 120520 121940 106600 134500 102060 114720 130230 118330 111990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 368720000 21868 4305 20477 41245 33142 33142 2718 1 9606 Homo sapiens -0.024770282675262933 QQTPPGLCPLAGNSVHEDKK Unmodified 2175.0743 0.074250936 2964 H0YG54;H0YGR4;F5GYG5;Q9Y3B8-2;Q9Y3B8-3;Q9Y3B8 REXO2 Oligoribonuclease, mitochondrial yes no 0 0 1 8 0 1 43.833 43.847 4 0.0001008 11046 20230619_1888_Aki_TMTPro18x_K_F8 81.356 67.484 19196 17307 21701 21882 19669 19641 26943 24181 20053 27275 22022 23072 25425 17182 15828 26105 21509 25058 17780 15878 21809 21702 20738 20142 26532 24479 20939 27242 22651 23405 25357 18414 16636 25997 20549 23798 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23183000 21869 2964 20478 41246 33143 33143 1 9606 Homo sapiens 0.03371678026906011 QQTQHAVEGDCDIHVLK Unmodified 1976.9374 0.9374231 2780 CON__P12763 yes yes 0 0 0 3.8 0.748 2 2 1 40.652 40.71 3;4 4.7279E-10 9823 20230619_1883_Aki_TMTPro18x_K_F4 143.99 128.05 + 121580 341340 436420 181740 1672200 1647200 935110 937730 1690100 507110 909430 1519700 470660 622530 928320 757890 949650 1530300 116540 310550 434220 216030 1618500 1538600 1007100 994180 1643800 568760 955120 1464500 518160 678110 936430 802890 912430 1443200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7740199999.999999 21870 2780 20479 41247;41248;41249;41250;41251 33144;33145 33144 2 9606 Homo sapiens -0.011968111327405495 QQTQSALEQR Unmodified 1187.5895 0.58946351 2712 B7ZLK2;B7ZLK1;Q86YS7;Q86YS7-2;Q86YS7-3;Q86YS7-4;A0A024RB03;Q86YS7-5;H0YFE9 KIAA0528;C2CD5 C2 domain-containing protein 5 yes no 0 0 0 3.5 0.5 1 1 31.977 32.038 2 0.00056454 6349 20230619_1883_Aki_TMTPro18x_K_F4 120.68 72.859 6326.2 2944.1 5479.1 5368.2 8197 11764 6499.6 5630 6965.6 6058.6 10476 10857 5481.8 6576.8 8665.8 4385.9 10618 8303.3 5827.4 2721.8 5679.5 5295.5 8278.2 11257 6667 6188.4 7197 6250.8 10371 10650 5918.1 6802 8838.8 4677.3 10125 7853.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4565900 21871 2712 20480 41252;41253 33146;33147 33147 2 9606 Homo sapiens 0.0031723551860523003 QQTSSRPPASVGELSSSGLGDPR Unmodified 2312.1357 0.13566522 3190 M0QY97;Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 0 0 1 7 0 1 42.437 42.512 3 3.155E-08 10285 20230619_1887_Aki_TMTPro18x_K_F7 101.59 74.966 45951 31593 36318 45817 42894 49407 48900 42250 49158 53062 48716 49545 55162 42733 44783 59578 58327 57620 42374 29058 37858 45114 44226 49507 48942 43971 50089 52940 50288 50230 55588 45219 46550 59441 55671 54751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55198000 21872 3190 20481 41254 33148 33148 1 9606 Homo sapiens 0.03208281259958312 QQVAFYGQTLGQAQAHSQEQ Unmodified 2218.0403 0.04030827 507 A0A024R8A7;Q96I24;Q96I24-2 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 0 0 0 6.5 0.5 1 1 49.508 49.589 3 9.7283E-55 13707 20230619_1886_Aki_TMTPro18x_K_F6 202.94 184.81 22017 19926 24504 21781 23231 23929 22688 25386 29660 30769 26951 31556 33599 25743 29678 32222 34450 35744 20391 18254 24644 21891 24208 24081 23139 25966 29742 30824 28101 31781 33881 27109 30524 32465 32925 33907 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 250920000 21873 507 20482 41255;41256 33149 33149 1 9606 Homo sapiens -0.019990271404367377 QQVASLETNDPILGFQATNER Unmodified 2330.1503 0.15025265 4394 Q96RS6;Q96RS6-3;Q96RS6-2 NUDCD1 NudC domain-containing protein 1 yes no 0 0 0 3.5 0.5 1 1 59.518 59.534 3 1.2053E-66 18128 20230619_1883_Aki_TMTPro18x_K_F4 293.67 269.37 27548 20088 25229 28256 20446 27392 25600 21963 26055 29242 25851 29356 31488 26352 28692 34473 27835 30778 25438 18465 25772 27838 21794 27625 25530 23030 26538 29168 26809 29687 31820 27708 29211 34289 26661 29262 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158390000 21874 4394 20483 41257;41258 33150 33150 1 9606 Homo sapiens 0.038383534081276593 QQVPSGESAILDR Unmodified 1398.7103 0.71030693 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 3.5 0.5 1 1 44.264 44.322 2 6.1374E-15 11405 20230619_1883_Aki_TMTPro18x_K_F4 227.93 179.14 559840 453900 486330 549910 519580 616300 574330 529730 608730 616280 672580 671460 705940 539800 634530 707990 703110 740680 517070 416380 501100 548240 539020 616130 576970 549690 620830 619880 688530 674820 715630 570360 650690 710340 672330 703010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 850150000 21875 261 20484 41259;41260 33151;33152 33152 2 9606 Homo sapiens 0.02690018441421671 QQVSLLK Unmodified 814.49125 0.49125301 1746 A0A8C8MUD1;Q12904;Q12904-2;B4DNK3;A0A804HJ47;A0A5F9ZHC5;D6R937 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 0 0 1.5 0.5 1 1 47.301 47.339 2 0.0095486 13221 20230619_1881_Aki_TMTPro18x_K_F2 119.17 37.539 366930 312070 376260 377720 369130 465050 381320 383000 513360 451110 499550 555100 509120 429980 424170 565080 602790 545590 339450 286220 381390 377200 384980 461630 387950 398800 514770 455590 513840 554510 515470 454680 443430 564170 574620 518620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 287070000 21876 1746 20485 41261;41262 33153;33154 33154 2 9606 Homo sapiens 0.07658703731397054 QQVSPIR Unmodified 826.4661 0.4661009 902 A0A090N7X1;A0A090N7Y2;Q9UG63;Q9UG63-2 ABCF2 ATP-binding cassette sub-family F member 2 yes no 0 0 0 7 0.816 1 1 1 33.558 33.597 2 0.0057599 7099 20230619_1886_Aki_TMTPro18x_K_F6 138.33 52.973 84056 47724 84527 84973 104670 127720 97950 95623 124090 100090 108070 109580 126140 90623 89433 70006 128810 105700 77580 44053 86148 83227 107080 125070 99941 100010 124260 101280 112380 110070 126340 93152 93628 72759 122700 100100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102280000 21877 902 20486 41263;41264;41265 33155;33156 33155 2 9606 Homo sapiens 0.04592648928814924 QQVVLENAAK Unmodified 1098.6033 0.60332266 3784 Q01780-2;Q01780 EXOSC10 Exosome component 10 yes no 0 0 0 6 0 1 44.278 44.37 2 0.0003081 11434 20230619_1886_Aki_TMTPro18x_K_F6 148.32 106.82 19385 15123 18748 19302 17049 24335 20667 18387 27239 22223 25590 22908 27429 20329 21263 23843 26610 27124 17915 13883 19084 19210 17997 24074 20827 19305 27290 22295 26386 23148 27626 21262 22039 24079 25412 25726 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13650000 21878 3784 20487 41266 33157 33157 1 9606 Homo sapiens 0.05796513017685356 QQWIDAIEQHK Unmodified 1394.6943 0.69426293 624 A0A2R8YFI2;A0A2R8YEA4;A0A2R8Y5H3;A0A2R8Y7Q9;A0A2R8YEK8;A0A2R8YE18;A0A2R8Y5S9;A0A024RAJ5;A0A2R8Y7C5;Q9Y5P4-2;Q9Y5P4;Q9Y5P4-3;A0A2U3TZL3;A0A2R8YCI0 COL4A3BP Collagen type IV alpha-3-binding protein yes no 0 0 0 7 0 1 55.007 55.07 3 1.5539E-11 15768 20230619_1887_Aki_TMTPro18x_K_F7 168.58 143.73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21879 624 20488 41267 33158 33158 1 9606 Homo sapiens 0.012703569951327154 QQYESVAAK Unmodified 1022.5033 0.50327426 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 0 0 5 0.816 1 1 1 40.265 40.339 2;3 9.3019E-09 9662 20230619_1886_Aki_TMTPro18x_K_F6 214.96 150.7 312290 161100 382180 314150 955670 1256600 488260 782340 692100 493550 753850 933910 605780 729020 737690 326580 858730 802110 288640 148990 390820 316330 936660 1187000 526290 822520 695490 528220 765460 919920 630740 736870 752110 362810 820070 757010 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 931530000 21880 3414 20489 41268;41269;41270 33159;33160;33161 33161 3 9606 Homo sapiens -0.007077243161006663 QQYIEQSQAEIYHNR Unmodified 1905.8969 0.8969385 4566 Q9NPL8;G3XA94 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes no 0 0 0 4.5 0.5 1 1 43.288 43.351 3 5.3286E-42 10939 20230619_1885_Aki_TMTPro18x_K_F5 217.01 200.87 47036 35330 44856 52238 60064 72117 61541 61334 76644 61099 75498 69133 67558 60125 66807 60655 81641 81453 43454 32490 46037 51586 61296 71126 62411 63386 77105 62048 77123 69531 69199 62367 68728 62129 77969 77145 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102060000 21881 4566 20490 41271;41272 33162;33163 33163 2 9606 Homo sapiens -0.019774094608237647 QQYLQSIEER Unmodified 1292.6361 0.63607935 842 A0A087WXX8;A0A087WWT1;P21912 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes no 0 0 0 3.5 0.5 1 1 47.27 47.312 2 2.29E-23 12948 20230619_1882_Aki_TMTPro18x_K_F3 214.05 171.19 72836 55141 67375 82006 85064 94030 93495 83607 94491 76846 78894 70815 96267 68836 65070 87636 91606 83978 67276 50711 69266 80707 87174 93897 93758 85985 95559 77891 82358 72166 96158 72133 68300 87490 87339 79830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99278000 21882 842 20491 41273;41274 33164;33165 33164 2 9606 Homo sapiens 0.0014667534990167042 QRAEGTDIPTVK Unmodified 1313.6939 0.69392858 2270 B2R9B8;H0YAP0;Q96GY0;A0A994J504;A0A994J7X1 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes no 0 0 1 6 0 1 39.232 39.32 3 3.5469E-05 9224 20230619_1886_Aki_TMTPro18x_K_F6 120.87 86.151 50611 36919 42450 34526 44435 54027 37633 50212 75839 48629 57967 80591 80468 76847 41422 102530 111530 98928 46704 33805 43776 35367 45964 53070 39545 51472 74313 50278 61382 80270 79716 80676 47007 102220 105950 94047 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70974000 21883 2270 20492 41275 33166 33166 1 9606 Homo sapiens 0.04962937275308832 QRAENTQEELR Unmodified 1372.6695 0.66950474 4622 Q9NXR1-1;Q9NXR1;X5DR54;A0A6Q8PEY3;X5DP35;A0A6Q8PGV6;I3L3G9;A0A6Q8PG46;I3L522;A0A6Q8PHH1;I3L2S8;A0A0J9YYF5;I3L464;X5DRF9 NDE1 Nuclear distribution protein nudE homolog 1 yes no 0 0 1 1 0 1 27.402 27.402 3 0.0070175 4992 20230619_1880_Aki_TMTPro18x_K_F1 79.492 37.097 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21884 4622 20493 41276 33167 33167 1 9606 Homo sapiens -0.001923228781834041 QRAEVLQSTQR Unmodified 1314.7004 0.70041094 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;H7C5N8;A0A2R8YET2 PRRC2C Protein PRRC2C yes no 0 0 1 7 0 1 29.042 29.149 3 0.0032679 5087 20230619_1887_Aki_TMTPro18x_K_F7 77.124 56.116 11450 8511.7 12323 13789 23934 20073 17624 24089 22317 9756.3 11222 11434 10969 7687 14449 6763 15524 9995.6 10588 7836.8 12622 13570 23727 19915 18281 23919 21995 10688 12035 11408 11365 8015.9 14644 7017.7 14804 9479.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8673500 21885 2894 20494 41277 33168 33168 1 9606 Homo sapiens 0.05564875226696131 QRDETALQLSVSQEQVK Unmodified 1958.0069 0.006882877 3050 H0YJ97;Q15643-2;Q15643;H0YJI2 TRIP11 Thyroid receptor-interacting protein 11 yes no 0 0 1 5 0 1 46.424 46.501 3 9.0038E-08 12295 20230619_1885_Aki_TMTPro18x_K_F5 120.99 94.451 15409 13833 14028 16148 18249 18133 16963 18367 18116 17452 22810 24783 23457 21213 16761 24304 24492 26657 14246 12680 14438 16145 18574 18198 17222 18722 18574 17907 23214 24712 23614 22154 17631 24482 23374 25286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6256300 21886 3050 20495 41278 33169 33169 1 9606 Homo sapiens 0.06619971087638987 QRDLEGAVSR Unmodified 1129.584 0.5839842 4506 Q9H307;A8K964;G3V5F0;G3V579 PNN Pinin yes no 0 0 1 4.5 0.5 1 1 32.174 32.244 3 7.4554E-06 6428 20230619_1883_Aki_TMTPro18x_K_F4 139.32 98.206 51714 46360 46162 46702 60530 59284 57212 56913 63342 57478 60318 49760 60653 46010 56936 61734 66334 55006 47805 42441 47566 47333 61603 58983 58062 58302 64063 57836 61975 50796 61689 48442 58501 61395 63299 52358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66856000 21887 4506 20496 41279;41280 33170 33170 1 9606 Homo sapiens 0.024375567267952647 QRDSEIMQQK Oxidation (M) 1277.6034 0.60339901 3769 P84101-4;P84101 SERF2 Small EDRK-rich factor 2 yes no 0 1 1 3.5 0.5 1 1 30.707 30.782 3 0.012014 5845 20230619_1883_Aki_TMTPro18x_K_F4 70.496 56.076 53157 35699 58875 49483 58579 52570 53445 52412 60151 60426 64855 54059 64377 44232 49571 63599 73613 54074 49141 32821 59246 48899 60626 52948 54429 53768 61106 60439 66204 54884 64965 47016 52063 63025 70064 51532 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55439000 21888 3769 20497 41281;41282 33171 33171 2453 1 9606 Homo sapiens -0.024298550446246736 QRDSEIMQQK Unmodified 1261.6085 0.60848439 3769 P84101-4;P84101 SERF2 Small EDRK-rich factor 2 yes no 0 0 1 4.5 0.5 1 1 35.428 35.497 3 5.7196E-05 7732 20230619_1883_Aki_TMTPro18x_K_F4 140.49 82.887 56461 43986 55933 50473 50089 58463 46744 48862 65924 75556 75861 53537 80075 56769 52822 63727 75560 55762 52189 40336 56732 50565 52467 58304 47965 51270 66530 74271 77346 55503 80226 58887 55497 63460 71939 53120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142710000 21889 3769 20497 41283;41284 33172 33172 1 9606 Homo sapiens -0.011855511819931053 QRDYILEGEPGK Unmodified 1403.7045 0.70449327 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;Q96K98;Q96K97;Q9UHB9-3 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 1 3.5 0.5 1 1 43.442 43.499 3 9.2846E-05 11044 20230619_1883_Aki_TMTPro18x_K_F4 113.69 80.285 143620 101120 119910 157360 159000 171830 164210 159210 182800 188530 223630 209150 218360 170680 189610 230550 222540 240610 132500 93073 124600 154340 162230 172300 165820 164340 186800 189580 227160 210220 221560 180580 195370 231140 212740 228360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172170000 21890 4661 20498 41285;41286 33173 33173 1 9606 Homo sapiens 0.018789199297316372 QREEEERQQQEEALR Unmodified 1956.9249 0.92494416 288 Q6Y7W6;Q6Y7W6-5;Q6Y7W6-4;A0A024R4A5;Q6Y7W6-3;I1E4Y6;A0A7I2V361;A0A7I2V3H0;A0A7I2V516;E7ESB6;A0A7I2V3H7;B4DZM1 GIGYF2;TNRC15 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 0 0 2 1 0 1 28.478 28.478 4 1.1105E-07 5404 20230619_1880_Aki_TMTPro18x_K_F1 136.01 107.43 6407.2 7231.2 6909 4560.2 8181.3 5894.4 5374.5 7624.2 6018.3 5859.9 7330.3 2537.7 5837.4 5053.8 8070.9 7538 5710.3 5960.8 5942.4 6595 6975.1 4861 8297 5917 5613.9 7609.5 6147.7 5915.2 7365.5 2839.8 6108.4 5262.8 8035.3 7447.9 5488.1 5677.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8787000 21891 288 20499 41287 33174 33174 1 9606 Homo sapiens -0.015241312714351807 QREEEIEAQEK Unmodified 1387.6579 0.657937 3321 O75937;S4R3J5 DNAJC8 DnaJ homolog subfamily C member 8 yes no 0 0 1 1.5 0.5 1 1 35.008 35.036 3 0.081791 8003 20230619_1880_Aki_TMTPro18x_K_F1 43.401 20.175 40294 25125 55240 61364 87806 79934 62437 79291 61693 56843 74806 72185 60152 55921 82708 28245 69183 55329 37318 23305 55373 59159 87759 79367 64464 80389 63408 59089 75525 71975 62928 56767 82646 30540 66228 52316 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41114000 21892 3321 20500 41288;41289 33175 33175 1 9606 Homo sapiens -0.02038564692225009 QREEHYFCK Unmodified 1295.5717 0.57170495 1640 A0A6Q8PH91;Q9BQ69 MACROD1 O-acetyl-ADP-ribose deacetylase MACROD1 yes no 0 0 1 6 0 1 35.074 35.127 3 0.0014639 7669 20230619_1886_Aki_TMTPro18x_K_F6 96.342 73.621 30514 23039 33377 33389 34629 37886 42672 40287 47689 40155 55183 56620 57150 50091 46914 51987 72345 72523 28223 21181 33694 32926 36073 38012 42710 40998 48544 41103 56350 56526 57814 52003 49313 53341 68974 68665 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25310000 21893 1640 20501 41290 33176 33176 1 9606 Homo sapiens -0.06425803007891773 QREELGQGLQGVEQK Unmodified 1697.8697 0.86966111 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 1 4 0 1 42.881 42.925 3 1.1272E-14 10783 20230619_1883_Aki_TMTPro18x_K_F4 191.51 155.85 241890 207040 238100 242130 297490 344370 323130 303360 372080 319130 386550 434440 379250 353650 385480 395880 428710 451640 223710 189820 243180 243000 305150 339500 325720 313180 376600 325300 395990 432980 387850 369540 394320 400250 409930 428300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 307200000 21894 673 20502 41291 33177 33177 1 9606 Homo sapiens 0.04864106998775242 QREELLSR Unmodified 1029.5567 0.55670682 1316 A0A1W2PRP7;A0A1W2PQ77;I3NI02;A0A1W2PR23;A0A1W2PPG5;O14653-2;O14653;A0A1W2PPP5;A0A1W2PR02;A0A1W2PPW8;I3L4Z6;A0A1W2PPG1;A0A1W2PRC2;A0A1W2PQM3;A0A1W2PS81;E7EQ34;I3L0K1;A0A1W2PQP2;B4E141;O14653-3;A0A1X7SBU8;A0A1W2PRV0;A0A1W2PS12;A0A1W2PRL0;A0A1W2PPJ0;A0A1W2PNV3;A0A1W2PQE0;I3L1K7;A0A1W2PQ06;A0A1W2PQ38;A0A1W2PRE6;A0A1W2PRD0 GOSR2 Golgi SNAP receptor complex member 2 yes no 0 0 1 4 0.816 1 1 1 31.548 31.621 3 0.0011097 6156 20230619_1883_Aki_TMTPro18x_K_F4 120.99 52.254 115120 91898 122640 130720 149540 149590 148550 151600 171250 135550 140080 144900 159250 114770 112040 176930 167160 146740 106490 84452 124400 129040 153040 149880 150520 154290 171880 138170 146010 145760 159620 122710 118160 174910 159260 139770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116160000 21895 1316 20503 41292;41293;41294 33178 33178 1 9606 Homo sapiens 0.04311073186431713 QREEMLEK Unmodified 1061.5175 0.51754412 1030 A0A0F7NGI8;Q32MZ4-3;Q32MZ4-2;Q32MZ4;B4DPC0;Q05D04 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes no 0 0 1 3 0 1 37.009 37.062 3 0.066548 8406 20230619_1882_Aki_TMTPro18x_K_F3 64.841 19.86 45543 31675 40665 45694 53071 60881 51074 56298 70128 54095 63772 65505 65166 53562 60718 56584 74463 63663 42036 29130 41936 45171 54155 60278 52198 57747 70055 55166 65796 65570 66257 55815 62548 57230 71038 60432 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31903000 21896 1030 20504 41295 33179 33179 1 9606 Homo sapiens -0.010753951594551836 QREFESR Unmodified 950.45699 0.45699277 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 1 2 0.816 1 1 1 25.258 25.334 3 0.021251 3804 20230619_1882_Aki_TMTPro18x_K_F3 78.77 64.563 733010 316970 798170 908830 1333900 1386400 1117900 1289500 1358900 874800 1245400 1474200 1235900 1020600 1157300 554040 1500000 1290600 676290 295660 814140 873990 1336700 1362200 1147000 1312300 1364500 925010 1284200 1452200 1258000 1043900 1193500 607630 1430500 1218800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 700480000 21897 1428 20505 41296;41297;41298 33180;33181 33181 2 9606 Homo sapiens -0.02021744427520389 QREMEEQMR Unmodified 1235.5387 0.53869027 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;P23246-2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 1 2.5 0.5 1 1 30.219 30.3 3 0.00023712 5809 20230619_1881_Aki_TMTPro18x_K_F2 118.4 106.24 65776 57850 65785 61247 83643 91912 72141 79201 90812 72568 74175 79618 79311 63786 68449 79396 94659 80409 60850 52987 67062 62007 85187 90338 73996 81562 90776 73944 77138 79966 80281 67159 71292 79561 90217 76414 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 265570000 21898 1450 20506 41299;41300 33182;33183 33182 2 9606 Homo sapiens -0.06965753122267415 QREQEIALR Unmodified 1141.6204 0.62036971 288 Q6Y7W6;Q6Y7W6-5;Q6Y7W6-4;A0A024R4A5;Q6Y7W6-3;I1E4Y6;A0A7I2V361;A0A7I2V3H0;A0A7I2V516;E7ESB6;A0A7I2V3H7;B4DZM1 GIGYF2;TNRC15 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 0 0 1 4 0 1 32.183 32.244 3 0.00015362 6411 20230619_1883_Aki_TMTPro18x_K_F4 132.88 50.23 59755 42994 52500 57167 66501 78426 64414 64137 79440 69177 87364 86206 81073 76056 78377 89555 101470 90395 55156 39497 54181 56822 67992 77337 65532 66640 80339 70198 88977 86441 82888 79456 81078 89797 96785 85889 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37803000 21899 288 20507 41301 33184 33184 1 9606 Homo sapiens 0.05522433623514189 QRESAATDVLQK Unmodified 1344.6997 0.69974224 2566 B4DPK2;Q9NVH1-3;Q9NVH1;Q9NVH1-2;B4DGD5 DNAJC11 DnaJ homolog subfamily C member 11 yes no 0 0 1 6 0 1 39.461 39.549 3 7.4944E-05 9333 20230619_1886_Aki_TMTPro18x_K_F6 117.03 56.056 45341 36540 52260 48546 64038 60330 56994 53619 61742 49650 65687 66602 63195 48643 58821 52640 70837 61102 41975 33552 52653 48195 65292 59978 58029 55150 62741 50921 67107 66232 64340 51001 60512 53334 67593 57981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69610000 21900 2566 20508 41302 33185 33185 1 9606 Homo sapiens 0.04118035786973451 QRGDQLVPFSTK Unmodified 1374.7256 0.72556306 198 A0A024R2F9;Q9BTV4;Q8TEP9;V9GY05 TMEM43;FLJ00144 Transmembrane protein 43 yes no 0 0 1 2 0 1 45.938 46.017 3 2.4807E-05 12595 20230619_1881_Aki_TMTPro18x_K_F2 128.31 101.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21901 198 20509 41303 33186 33186 1 9606 Homo sapiens 0.05318930029261537 QRGEEMIAR Unmodified 1088.5397 0.53967654 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A0U1RQJ2;Q9HDA7 DST;CATX-15 Dystonin yes no 0 0 1 3.5 0.5 1 1 29.66 29.744 3 0.0061265 5512 20230619_1882_Aki_TMTPro18x_K_F3 63.184 40.604 34007 28735 33172 35201 47309 38079 35487 40474 48736 40842 43989 41262 46184 34929 40080 36587 50024 37047 31445 26358 33967 35063 47619 38382 36888 41175 48709 41279 45425 41652 46756 36349 41385 36785 47677 35230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 14870000 21902 1693 20510 41304;41305 33187;33188 33187 2 9606 Homo sapiens -0.0010517069104025722 QRGWEEDEDPERK Unmodified 1672.7441 0.74412625 3252 O43290;B4DDH9 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 2 2 0 1 35.75 35.807 4 0.0021412 8004 20230619_1881_Aki_TMTPro18x_K_F2 82.529 48.832 45950 40547 50247 48798 57692 57383 52732 50901 66236 54245 60848 60683 63318 52296 55122 59062 66651 50910 42542 37181 50777 48724 59161 57249 53877 52546 66472 54870 62782 61032 64156 54565 56846 58790 63550 48498 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22909000 21903 3252 20511 41306 33189 33189 1 9606 Homo sapiens -0.06533604857531827 QRHDGAFLIR Unmodified 1211.6523 0.65233854 1416 A0A384ME16;Q6ICN0;B0LPF3;P62993;B3KR50;J3KT38;J3QRL5 GRB2 Growth factor receptor-bound protein 2 yes no 0 0 1 2 0 1 33.356 33.415 3 0.0020781 7053 20230619_1881_Aki_TMTPro18x_K_F2 89.317 56.197 32942 20106 30530 35303 32836 38874 38011 35992 36792 32376 38825 35206 31048 30129 34190 33753 40253 35290 30394 18549 31284 34419 34077 38939 37987 36884 37601 33006 39384 35459 32116 31421 35042 33952 38421 33520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20798000 21904 1416 20512 41307 33190 33190 1 9606 Homo sapiens 0.0549784609731887 QRIDEFEAM Unmodified 1137.5125 0.51245874 2184 P35241;B0YJ88;P35241-4;B7Z2S7;Q9NST9 RDX;DKFZp434I0812 Radixin yes no 0 0 1 1.5 0.5 1 1 49.432 49.461 2 0.037549 14196 20230619_1881_Aki_TMTPro18x_K_F2 73.208 53.211 168500 159800 176740 180100 167480 179580 198950 188440 239260 228710 239090 231830 259530 202470 186500 273560 248720 240890 156020 146410 178740 180290 175510 181920 200020 193020 241440 229100 246050 234320 260680 213610 194850 271670 237320 229170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205870000 21905 2184 20513 41308;41309 33191 33191 1 9606 Homo sapiens -0.05079699022076056 QRLDDEAR Unmodified 1001.489 0.48902118 3438 P12036-2;P12036 NEFH Neurofilament heavy polypeptide yes no 0 0 1 1 0 1 27.031 27.031 3 0.00075302 4869 20230619_1880_Aki_TMTPro18x_K_F1 118.41 71.488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21906 3438 20514 41310 33192 33192 1 9606 Homo sapiens -0.011663767443792494 QRLEEETR Unmodified 1059.5309 0.530886 2433 B3KWQ6;P41219;P41219-2;F8W835 PRPH Peripherin yes no 0 0 1 1.5 0.5 1 1 25.352 25.388 3 0.00082046 3878 20230619_1881_Aki_TMTPro18x_K_F2 131.44 94.095 88893 46783 99508 116490 106590 123130 89787 115870 122700 97972 165750 241450 167580 170720 153370 73532 231280 224000 82095 43450 100390 111840 109790 123680 92667 118440 124680 104320 168610 235750 170540 173280 160030 84163 220480 211190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 915400000 21907 2433 20515 41311;41312 33193;33194 33194 2 9606 Homo sapiens 0.00350178944131585 QRLEELQLFK Unmodified 1302.7296 0.7295858 2443 B3KY42;Q96PZ0;Q96PZ0-2;B3KRB2;E7EUH7 PUS7 Pseudouridylate synthase 7 homolog yes no 0 0 1 1 0 1 53.941 53.941 3 2.1698E-05 15983 20230619_1880_Aki_TMTPro18x_K_F1 134.3 77.522 143000 120940 136020 140510 126500 151470 144960 152200 166840 183850 170380 164340 190970 162730 163830 225200 178600 193450 132200 110880 138650 140480 132780 152350 145830 156230 169020 183490 175490 167780 192980 171190 168240 223340 170850 184020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46875000 21908 2443 20516 41313 33195 33195 1 9606 Homo sapiens 0.09033019522962604 QRNEVVVELR Unmodified 1240.6888 0.68878362 3093 H7C4F6;O00629;A0A7I2YQ95;A0A7I2V340;A0A7I2V333 KPNA4 Importin subunit alpha-3 yes no 0 0 1 5 0 1 37.049 37.142 3 0.00073467 8338 20230619_1885_Aki_TMTPro18x_K_F5 100.72 45.27 90861 74948 92601 104740 95284 97376 100190 92815 112630 102960 112160 96952 107910 81798 102730 117950 99817 98133 84034 68852 94024 103200 98830 98929 101130 95462 113990 103350 114810 98279 109940 86809 104480 116800 95520 93423 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110770000 21909 3093 20517 41314 33196 33196 1 9606 Homo sapiens 0.07806678203382944 QRPADAEDLPAAPGQSIDK Unmodified 1977.9756 0.97558275 2358 B3KNM8;B4E2X3;C4B4C6;B3KNI0;Q8N6R0-1;Q8N6R0-3;Q8N6R0-4;Q8N6R0;B3KM50 feat;METTL13 Methyltransferase-like protein 13 yes no 0 0 1 3.5 0.5 1 1 44.363 44.421 3 0.0044363 11588 20230619_1882_Aki_TMTPro18x_K_F3 72.421 54.932 28386 21378 25836 24172 24872 32073 27575 24567 30421 31976 36883 36918 36385 28868 28012 42198 37404 35978 26215 19603 26437 24291 26028 31655 27740 25822 31090 32071 37504 36999 36744 30742 29229 41799 35688 34244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72713000 21910 2358 20518 41315;41316 33197 33197 1 9606 Homo sapiens 0.025713980535556402 QRPDLGSAQK Unmodified 1098.5782 0.57817054 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;A0A3B3IS57;A0A3B3ITP6;A0A8V8TKP2;E5RFR3 MCM4 DNA replication licensing factor MCM4 yes no 0 0 1 7 0.816 1 1 1 34.68 34.718 3 1.3204E-05 7352 20230619_1888_Aki_TMTPro18x_K_F8 141.08 104.06 292870 151710 335770 334430 381370 423740 333080 366410 385340 327930 456580 447830 436810 366850 413090 202870 462760 374680 270520 140590 338160 323540 391200 420020 340530 377210 392150 337220 464160 446080 445210 372630 421970 216910 441680 354380 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 392490000 21911 471 20519 41317;41318;41319 33198;33199;33200 33199 3 9606 Homo sapiens 0.03282458215130646 QRPGASTDSSTQGANLPDFELLSR Unmodified 2546.2361 0.23610754 3190 M0QY97;Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 0 0 1 6.5 0.5 1 1 53.429 53.502 3 3.2519E-26 15138 20230619_1887_Aki_TMTPro18x_K_F7 180.66 169.79 45100 41014 45900 49443 44689 54250 48703 51968 51661 58261 55039 52375 61930 49858 54400 60005 57518 64873 41738 37606 46568 49306 46655 54433 48992 53403 52648 58352 56596 53362 62607 52082 55655 60391 55054 61538 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 173560000 21912 3190 20520 41320;41321 33201;33202 33202 2 9606 Homo sapiens 0.024838935229581693 QRPGQQVATCVR Unmodified 1398.715 0.71501515 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;E9PLT0;E9PNG3;A0A8I5KXL1;A0A8I5KYL8;Q9UG93 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 yes no 0 0 1 3 1.41 1 1 1 1 1 28.917 28.983 3 1.1145E-07 5333 20230619_1881_Aki_TMTPro18x_K_F2 154.28 132.21 105520 82458 79428 84706 111110 143010 107570 104920 147660 26839 31407 27047 26244 22338 45223 21847 32970 25047 97342 75540 83396 86127 113120 139270 109770 107720 143120 31586 37476 27364 27902 23177 44841 22221 31609 23785 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 145680000 21913 88 20521 41322;41323;41324;41325;41326 33203;33204;33205;33206 33205 4 9606 Homo sapiens 0.031606241031795435 QRPLTASLQCNSTAQTEK Unmodified 2032.0008 0.0007516416 2761 C9JUJ0;Q9UFW8 CGGBP1 CGG triplet repeat-binding protein 1 yes no 0 0 1 4.5 3.5 1 1 39.871 39.866 3 1.5026E-23 10039 20230619_1880_Aki_TMTPro18x_K_F1 194.67 157.52 54653 43238 54824 59441 51361 72180 68665 67322 70485 65810 73741 78127 72985 60059 58897 83960 80234 78032 50527 39721 55685 58847 54193 71849 68288 69074 71800 66960 75489 78167 73852 63799 61455 83578 76546 74186 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64787000 21914 2761 20522 41327;41328 33207;33208 33207 2 9606 Homo sapiens 0.026031295845086788 QRPPQTPLR Unmodified 1091.62 0.61997578 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;Q9NZB2-5;Q9NZB2-2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 0 1 3 0 1 29.86 29.954 3 0.028103 5528 20230619_1882_Aki_TMTPro18x_K_F3 63.397 47.195 17773 14138 19039 20890 24957 28342 23817 29330 58168 11931 13328 14350 12505 13753 13393 12059 17401 11800 16441 12998 19338 20632 25500 28098 25102 29408 55363 13164 15743 14448 12882 14100 13814 12140 16571 11231 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12175000 21915 1839 20523 41329 33209 33209 1 9606 Homo sapiens 0.0778305869430369 QRPQATAEQIR Unmodified 1296.6898 0.68984626 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;Q5VU77;Q5VU79;Q5VU78;Q5VU81;Q5VU80;Q14157-1;Q14157-4 UBAP2L Ubiquitin-associated protein 2-like no no 0 0 1 6 0.816 1 1 1 27.017 27.085 3 1.0683E-12 3743 20230619_1887_Aki_TMTPro18x_K_F7 184.03 97.261 172030 142390 163940 175170 211190 240480 208790 213960 283080 96474 100410 77684 84357 62896 126010 106350 120560 51892 159020 130630 168010 175050 215760 237540 212780 217220 276280 103600 110840 79454 88635 67626 126970 103210 114930 50116 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 401560000 21916 3877;3878 20524 41330;41331;41332 33210;33211;33212 33212 3 9606 Homo sapiens 0.053368925722679705 QRQEEPPPGPQRPDQSAAAAGPGDPK Unmodified 2680.2954 0.29535376 4411 Q9BQ61;K7ELS0;K7ERU7;K7EN60;B2RE11 C19orf43 Uncharacterized protein C19orf43 yes no 0 0 2 3 0 1 35.444 35.501 4 0.021757 7792 20230619_1882_Aki_TMTPro18x_K_F3 47.807 34.38 7053.7 7025.6 6757.2 8086.8 8006.5 9294.5 6155.7 7656.3 8373.9 9496.3 10026 9378.9 12277 8549.2 9744.1 10673 8132.3 9248.9 6529 6437.1 6914.2 8093.7 8177.1 9270.4 6390.6 7980.2 8481.6 9494.7 10300 9502.4 12321 8965.3 9869.7 10610 7804.2 8795.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41388000 21917 4411 20525 41333 33213 33213 1 9606 Homo sapiens 0.02241789537083605 QRQEVCQSYK Unmodified 1324.6194 0.61938343 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;Q6ZP35;E7EMC6;E5RJF5;E5RK63;A0A0S2Z301;E5RI05;E5RFF0;E5RIU8;E5RJR0;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 1 7 0.816 1 1 1 32.721 32.763 3 0.0001793 6400 20230619_1887_Aki_TMTPro18x_K_F7 124.1 80.112 127320 68581 148800 140910 257810 274070 165520 199750 187290 68501 104300 87915 78697 75269 156360 47960 122230 67445 117650 63464 150920 137920 256580 265150 172960 205490 185930 77097 109850 88057 84893 76590 155110 50102 116900 64054 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 271290000 21918 1062;1064 20526 41334;41335;41336 33214;33215;33216 33215 3 9606 Homo sapiens -0.029941488077156464 QRSDDESPSTSSGSSDADQRDPAAPEPEEQEER Unmodified 3588.4956 0.49564188 1279 R4GND1;A0A1B0GX65;Q969T4;R4GN77;R4GMM6;R4GNG6 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 yes no 0 0 2 1 0 1 32.301 32.301 4 4.2388E-22 6905 20230619_1880_Aki_TMTPro18x_K_F1 158.1 153.25 3382.9 3099.5 3283.7 3787 3671 4648.2 3262.2 3209 3965 5637.4 3566.6 3243.6 3606.1 3515.4 3837 6013.3 7221.2 4455.3 3129.6 2842.3 3353 3777.3 3777.8 4601.2 3335.4 3441.3 3996.2 5493.9 3678.6 3411.9 3699.1 3747.3 4095.3 5908.2 6857.4 4258.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16631000 21919 1279 20527 41337 33217 33217 1 9606 Homo sapiens -0.19506611486440306 QRVEDFNR Unmodified 1062.5207 0.52065566 453 B2R547;A0A024R7I4;Q9Y421-3;Q9Y421 FAM32A Protein FAM32A yes no 0 0 1 4.5 0.5 1 1 30.759 30.829 3 0.00097593 5856 20230619_1883_Aki_TMTPro18x_K_F4 128.36 84.553 57031 38698 50621 53841 66171 70659 63475 61621 82026 55308 64969 57147 56413 46134 59866 49939 71751 53798 52630 35577 52209 53329 67456 69954 64702 63404 81735 56349 67038 57579 58020 48168 61406 50378 68412 51122 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39511000 21920 453 20528 41338;41339 33218 33218 1 9606 Homo sapiens -0.008103839904379129 QRVELLER Unmodified 1041.5931 0.59309232 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 5.5 0.5 1 1 36.695 36.775 3 0.0017959 8253 20230619_1886_Aki_TMTPro18x_K_F6 115.71 44.264 119940 100430 110860 117340 138630 146910 129590 118700 158020 144790 147270 136430 161730 122840 134850 159350 160770 136690 110850 92088 113810 117500 141570 145710 132040 123930 158970 144750 152130 138480 163260 129130 139150 158210 153410 130160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104600000 21921 3440 20529 41340;41341 33219;33220 33220 2 9606 Homo sapiens 0.07395950083150638 QRVEQFAR Unmodified 1032.5465 0.54647648 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 1 7 0.816 1 1 1 31.29 31.337 3 0.0007069 5830 20230619_1887_Aki_TMTPro18x_K_F7 126.41 74.557 239600 194570 236550 216990 349420 340120 293580 324000 371680 190580 235770 230340 191980 168740 313540 178300 247220 178770 221520 178350 242080 219030 352280 334310 301590 328330 368210 201240 246580 230030 203160 176520 312250 179530 236700 170050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 239780000 21922 657 20530 41342;41343;41344 33221;33222 33221 2 9606 Homo sapiens 0.03150510251839478 QRWDEAFR Unmodified 1106.5257 0.52574104 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1;H7C4A8;A0A2S1WCK0 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 1 7 0.816 1 1 1 41.534 41.588 3 0.00036015 9896 20230619_1887_Aki_TMTPro18x_K_F7 144.9 117.08 225250 165620 193840 222960 207090 283300 242360 250640 319680 256830 249810 263950 299390 238160 263800 317190 312950 316400 207910 152150 199990 221150 215640 280940 244650 258410 318390 259620 261850 266850 302280 250790 271880 317260 298980 300510 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 262470000 21923 3515 20531 41345;41346;41347 33223;33224;33225 33224 3 9606 Homo sapiens -0.023260801278183862 QRWDEAFRK Unmodified 1234.6207 0.62070406 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1;H7C4A8;A0A2S1WCK0 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 2 2.5 0.5 1 1 41.957 42.028 4 0.041424 10474 20230619_1882_Aki_TMTPro18x_K_F3 61.765 50.182 536110 455850 484170 476330 504640 544520 538380 598740 575830 578090 538800 483870 610180 450740 557820 622060 628570 464560 495450 417530 496390 480660 523460 546900 542280 607010 583360 582330 557370 494770 617620 475260 572340 613420 599590 443510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 268560000 21924 3515 20532 41348;41349 33226;33227 33227 2 9606 Homo sapiens 0.012778533433674966 QRYEILTPNAIPK Unmodified 1541.8566 0.85657723 3549;4165 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43;B3KWH4 MYH10;MYH14 Myosin-10;Myosin-14 no no 0 0 1 2 0 1 49.826 49.885 3 5.8999E-06 14383 20230619_1881_Aki_TMTPro18x_K_F2 128.68 68.112 72442 70465 84246 72285 67726 77059 77701 76637 85394 81528 81924 75647 80299 68623 80099 87116 85589 85530 67154 64502 84275 72990 71909 77585 78050 78453 86420 81960 84117 76861 82005 72002 81796 87138 81838 81253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82173000 21925 3549;4165 20533 41350 33228 33228 1 9606 Homo sapiens 0.10732320677334428 QRYEILTPNSIPK Unmodified 1557.8515 0.85149185 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1 MYH9 Myosin-9 yes no 0 0 1 2 0 1 49.158 49.223 3 4.48E-06 14059 20230619_1881_Aki_TMTPro18x_K_F2 132.86 92.268 156330 146470 151410 157860 156610 177360 191890 187240 197310 216320 198520 200480 241610 171180 194840 259940 245480 216560 144650 134150 154370 158830 163210 178140 191590 191340 200930 216510 205510 203340 242820 182350 202090 257160 234180 206250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166390000 21926 148 20534 41351 33229 33229 1 9606 Homo sapiens 0.0948801681470286 QSAEDILLK Unmodified 1015.555 0.55497548 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;Q8TAS6 LAMB1 Laminin subunit beta-1 yes no 0 0 0 4 0 1 53.007 53.027 3 0.059372 15483 20230619_1883_Aki_TMTPro18x_K_F4 45.158 7.9668 82581 60902 88469 88799 95534 110600 95295 92117 118650 97365 93332 110410 113620 96102 93228 127240 121460 122620 76358 56001 89494 87633 98725 109710 96811 95535 118540 98581 97942 111010 114400 101240 96905 127000 115940 116510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 244390000 21927 3015 20535 41352 33230 33230 1 9606 Homo sapiens 0.047820193778079556 QSAQLTALAAQQQAAGK Unmodified 1683.8904 0.89039656 2298 B4E1C9;Q53GS5;B2RBI2;Q96A49;B4DHY7 SYAP1 Synapse-associated protein 1 yes no 0 0 0 2.5 0.5 1 1 48.93 49.002 3 6.6226E-05 14002 20230619_1881_Aki_TMTPro18x_K_F2 93.152 53.591 38981 25882 31637 37311 35866 43203 36948 39624 44889 37695 46697 48675 49461 39073 44586 50612 48743 58092 35946 23807 32850 36797 37009 43134 37446 40675 45323 38543 47958 48611 50142 41250 45690 51071 46662 55063 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214000000 21928 2298 20536 41353;41354 33231 33231 1 9606 Homo sapiens 0.07580697378398327 QSDVMIVAGTLTNK Unmodified 1475.7654 0.76537896 2001 F5H5N1;B7Z1U1;A8K0V6;Q8NAS7;Q7LD69;F5GXJ1;O75251-2;O75251;B7Z4P1;Q6ZQU6;Q9H3K5 NDUFS7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes no 0 0 0 4.5 3.5 1 1 59.193 59.235 3 2.7065E-05 17480 20230619_1888_Aki_TMTPro18x_K_F8 109.92 85.358 41292 32488 41298 50867 43587 47383 50271 47761 53344 48484 47566 43050 50380 43715 48929 51206 46825 44015 38172 29891 42047 49779 45259 48168 50387 48806 53937 48810 49178 43998 51263 45459 49675 50936 44803 41892 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21065000 21929 2001 20537 41355;41356 33232;33233 33233 2 9606 Homo sapiens 0.04652688917690284 QSEAVHLQR Unmodified 1066.552 0.55195579 4594 Q9NU22 MDN1 Midasin yes yes 0 0 0 4 0 1 29.747 29.814 3 4.2602E-05 5508 20230619_1883_Aki_TMTPro18x_K_F4 143.21 94.652 20030 16080 18806 20308 25118 28463 21103 25344 27102 25038 23702 26502 26746 19121 20354 26101 32833 28016 18510 14757 19309 20265 25503 28086 21705 26078 27149 25364 24622 26578 26889 20356 21526 26205 31261 26607 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16779000 21930 4594 20538 41357 33234 33234 1 9606 Homo sapiens 0.021341890436588073 QSEDPSCPNER Unmodified 1317.5255 0.52554262 1714 A0A7P0TBI1;A0A7P0TBC5;Q4KMQ2-3;Q4KMQ2;Q4KMQ2-2;A0A7P0TAW4;A0A7P0TBD5;A0A7P0T8Y2;B4E1V1;A0A7P0TAF4;B4DZA5;Q4KMQ2-4;B3KX12 ANO6 Anoctamin-6;Anoctamin yes no 0 0 0 1 0 1 28.48 28.48 2 0.031279 5399 20230619_1880_Aki_TMTPro18x_K_F1 64.297 61.688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21931 1714 20539 41358 33235 33235 1 9606 Homo sapiens -0.12051912700667344 QSEPFFK Unmodified 881.42832 0.42831841 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A8Q3WL93;A0A8Q3WLT0;A0A8Q3WL80;E7EM57;Q0PHS1;A0A8Q3WL83;E9PD92;A0A8Q3WL90;Q0PHS2;Q0PHS3;I3V9R4 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 6.5 0.5 1 1 49.628 49.709 3 0.016579 13801 20230619_1886_Aki_TMTPro18x_K_F6 77.282 58.552 35473 28161 36146 40155 35861 41431 42701 43741 47938 49318 52471 65532 52159 48535 44417 58051 66642 68229 32800 25880 36688 39573 37468 41835 42829 44682 48726 50017 53689 65168 52929 51112 46604 58709 63559 64690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65428000 21932 1464 20540 41359;41360 33236 33236 1 9606 Homo sapiens -0.017138620566583995 QSETYNYLLAK Unmodified 1328.6612 0.66123147 4529 Q9H814 PHAX Phosphorylated adapter RNA export protein yes yes 0 0 0 8 0 1 54.204 54.275 3 0.0011073 15389 20230619_1888_Aki_TMTPro18x_K_F8 89.805 65.513 80139 68037 82479 80869 86090 94365 95599 92433 99686 91981 94573 84895 100100 76563 94000 93615 94763 98178 74137 62391 83641 80818 89364 94362 95969 94544 101120 92778 97463 86268 101630 80215 95733 94059 90685 93189 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65087000 21933 4529 20541 41361 33237 33237 1 9606 Homo sapiens 0.010047301524764407 QSEVPKPEDGEPPR Unmodified 1563.7529 0.75290002 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DM27 PRRC2C Protein PRRC2C yes no 0 0 1 2.5 0.5 1 1 37.559 37.615 3 1.1393E-06 8601 20230619_1882_Aki_TMTPro18x_K_F3 107.5 92.508 25226 18998 24212 26565 29628 33336 29130 28848 36097 32565 33156 34354 35447 28182 26176 39498 37614 34565 23306 17459 24777 26282 30350 33083 29611 29878 36263 32776 34251 34594 35664 29872 27485 39193 35857 32893 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38804000 21934 2894 20542 41362;41363 33238 33238 1 9606 Homo sapiens -0.006426312210123797 QSFTMVADTPENLR Unmodified 1607.7614 0.76135622 157 A0A024R1S8;Q14847;A8K1D2;Q14847-2;C9J9W2;B4DIC4;B4DJI4;F6S2S5 LASP1 LIM and SH3 domain protein 1 yes no 0 0 0 5 0 1 52.323 52.397 2 9.3793E-07 14787 20230619_1885_Aki_TMTPro18x_K_F5 172.33 137.07 27863 21995 24102 23052 24380 31956 29933 29801 38104 35851 35940 40675 49013 35553 35118 42579 48691 45228 25730 20152 24804 23325 25512 31583 30106 30744 38278 36064 37566 40889 48920 37245 36740 42801 46432 42942 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39073000 21935 157 20543 41364 33239 33239 1 9606 Homo sapiens -0.018214005760228247 QSGEAFVELGSEDDVK Unmodified 1708.7792 0.77917435 470 A0A024R7T3;P52597;A0A1B0GW42 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 0 0 2 0.707 1 2 1 54.809 54.832 2;3 3.2404E-20 16511 20230619_1881_Aki_TMTPro18x_K_F2 211.13 181.79 44406 35564 39629 41030 41580 55807 51301 49100 56534 51101 47720 42956 53172 42054 49071 56916 52200 49759 41019 32610 40712 41185 43385 55133 51307 50663 56945 51311 49588 43983 53885 44209 50186 56533 49898 47347 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1054099999.9999999 21936 470 20544 41365;41366;41367;41368 33240;33241 33241 2 9606 Homo sapiens -0.04686406840187374 QSGESIDIITR Unmodified 1217.6252 0.62518031 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;F5GWI0;F5H2L3;A0A7P0Z4L2;F5GZY8 DDB1 DNA damage-binding protein 1 yes no 0 0 0 3.5 0.5 1 1 45.651 45.711 2 0.0010518 12165 20230619_1882_Aki_TMTPro18x_K_F3 119.74 88.67 216440 168320 196190 221680 218930 244660 244160 231220 267380 277160 307840 295000 328430 282060 238260 320740 331430 322700 199920 154560 201500 219730 226350 245320 245430 238420 272740 278220 314630 298340 330330 293410 249460 321570 316140 306510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 286350000 21937 1710 20545 41369;41370 33242;33243 33242 2 9606 Homo sapiens 0.02507272975617525 QSGGTTALPLYFVGLYCDK Unmodified 2089.019 0.019027468 1906 A1MA90;Q9H9J2 MRPL44 39S ribosomal protein L44, mitochondrial yes no 0 0 0 3 0 1 64.395 64.427 3 5.5286E-15 20305 20230619_1882_Aki_TMTPro18x_K_F3 163.53 151.74 52840 46803 49401 57633 50191 64306 64063 58166 68158 67820 63631 70943 74084 60656 63093 75533 70391 76876 48858 42927 50552 57389 52514 64359 63893 60126 69048 68124 66007 71507 74747 63707 64824 75703 67324 72979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82562000 21938 1906 20546 41371 33244 33244 1 9606 Homo sapiens 0.01807871506525771 QSGPGAPNLDR Unmodified 1110.5418 0.54178503 1533 A0A3F2YNX0;A0A3F2YNZ0;F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5;A4QN18 SEC16A Protein transport protein Sec16A yes no 0 0 0 3.5 0.5 1 1 34.942 34.997 2 0.00012451 7544 20230619_1883_Aki_TMTPro18x_K_F4 135.8 78.985 21663 15472 23226 26158 25637 29998 25930 26463 34991 25270 25019 32325 27060 24904 28504 28288 36452 34273 20027 14256 23520 25566 26471 29940 26403 27252 34714 25837 26284 32218 27652 26108 29394 28709 34785 32497 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16688000 21939 1533 20547 41372;41373 33245 33245 1 9606 Homo sapiens -0.009064186815976427 QSGVPLAK Unmodified 798.45995 0.45995289 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 8 0 1 42.231 42.234 2 0.0078433 10392 20230619_1888_Aki_TMTPro18x_K_F8 106.42 68.29 30080 21262 38048 36320 45325 53580 42912 45736 51243 39216 51737 50611 51075 42238 49308 34916 50062 50725 27852 19594 38094 35644 46455 52650 43676 47074 51701 40354 53025 50569 52049 43482 50130 36142 47896 48009 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10765000 21940 2332 20548 41374 33246 33246 1 9606 Homo sapiens 0.052661306972822786 QSIAIDDCTFHQCVR Unmodified 1848.8247 0.82470153 853 Q96CW1;Q96CW1-2;A0A087WY71;E9PFW3;B4DNB9;C9JPV8;C9JGT8;B4DJB1;C9JJD3;H7C4C3;B4DFM1;A0A8I5KWD3;B4DTI4;B7Z4N2 AP2M1 AP-2 complex subunit mu yes no 0 0 0 4.5 0.5 1 1 44.362 44.424 3 3.1922E-43 11365 20230619_1885_Aki_TMTPro18x_K_F5 290.23 254.76 46916 38973 44545 50248 38133 41989 45308 44506 45331 56755 58755 55991 61392 49273 52476 70528 60879 61978 43368 35771 45382 49708 40304 43150 45298 45642 46762 56650 59743 56685 62130 52174 54084 69997 58175 58953 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 346020000 21941 853 20549 41375;41376 33247 33247 1 9606 Homo sapiens -0.06575783130460877 QSIDALK Unmodified 773.42832 0.42831841 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 0 6 0 1 45.228 45.317 2 0.027659 11809 20230619_1886_Aki_TMTPro18x_K_F6 102.46 20.012 281800 166710 278690 266500 331500 346830 296840 312910 385370 281350 392400 423770 397910 318590 328960 281010 469830 391760 260100 153630 284030 261890 339230 343730 304140 321150 387420 290530 402610 419980 402650 330260 343170 289400 447630 371210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 488870000 21942 817 20550 41377 33248 33248 1 9606 Homo sapiens 0.03254137943315527 QSIINPDWNFEK Unmodified 1489.7201 0.72014333 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;A0A994J5C5;A0A994J855;A0A994J5Y2;A0A994J7T3 NSF Vesicle-fusing ATPase yes no 0 0 0 6.33 0.471 2 1 60.7 60.752 2;3 0.00061541 18407 20230619_1886_Aki_TMTPro18x_K_F6 102.87 83.034 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21943 1435 20551 41378;41379;41380 33249;33250;33251 33249 3 9606 Homo sapiens -0.005127935532300398 QSILILK Unmodified 813.53239 0.53238955 2592;4494 B4DUD5;P33240-2;P33240;E7EWR4;B3V096;Q9H0L4 CSTF2;CSTF2T Cleavage stimulation factor subunit 2;Cleavage stimulation factor subunit 2 tau variant no no 0 0 0 3 0 1 55.666 55.707 2 0.0055077 16645 20230619_1882_Aki_TMTPro18x_K_F3 112.94 34.445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21944 2592;4494 20552 41381 33252 33252 1 9606 Homo sapiens 0.11816464770834045 QSKPVTTPEEIAQVATISANGDK Unmodified 2383.2231 0.22308324 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;B7Z4F6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;B7Z532;Q53SE2;E7ESH4;E7EXB4;B9VP19;B9VPB4 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 1 7.5 0.5 1 1 55.702 55.763 3 3.2177E-13 15973 20230619_1887_Aki_TMTPro18x_K_F7 132.84 121.32 30751 25439 31743 32527 37071 43891 37019 36726 33682 37622 38798 35711 38230 26742 37490 32839 29667 24048 28444 23347 32254 32409 38088 43344 37236 38029 34734 37902 39529 36035 38942 28216 37676 32435 28422 22955 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46145000 21945 272 20553 41382;41383 33253;33254 33253 2 9606 Homo sapiens 0.08680062410849132 QSLDPTVDEVK Unmodified 1229.6139 0.61394692 1825 A0A8V8TMD9;Q8N122-3;Q8N122;B7Z3S8;Q8N122-2 RPTOR Regulatory-associated protein of mTOR yes no 0 0 0 3 0.816 1 1 1 32.088 32.154 4 0.057279 6452 20230619_1882_Aki_TMTPro18x_K_F3 39.148 16.542 116620 46417 162440 156090 192870 197130 139960 170990 165140 115490 215440 285990 157500 170510 199930 65342 235110 212220 107840 43493 161570 148930 196300 195410 145190 175020 168500 124860 216680 278200 164840 174030 203720 76058 224450 200090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194080000 21946 1825 20554 41384;41385;41386 33255 33255 1 9606 Homo sapiens 0.008324508814439469 QSLEASLAETEGR Unmodified 1389.6736 0.67358707 1272 P13645;CON__P13645;A0A1B0GVI3;CON__P02535-1 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 1.5 0.5 1 1 47.739 47.774 2 2.1673E-18 13403 20230619_1881_Aki_TMTPro18x_K_F2 191.95 156.07 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21947 1272 20555 41387;41388 33256;33257 33257 2 9606 Homo sapiens -0.0056627817514254275 QSLEQERDR Unmodified 1159.5582 0.55816338 862 Q9ULU4-19;Q9ULU4-18;H7C4X9;A0A087WYS3;Q9ULU4-7;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-20;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-12;Q9ULU4-14;Q9ULU4-21;Q9ULU4-8;Q9ULU4-23;Q9ULU4-15;Q9ULU4-17;Q9ULU4-6;Q9ULU4-3;Q9ULU4-2;Q9ULU4-4;Q9ULU4-22;A0A087WVZ6 ZMYND8 Protein kinase C-binding protein 1 yes no 0 0 1 1 0 1 27.318 27.318 3 0.00011179 4963 20230619_1880_Aki_TMTPro18x_K_F1 144.28 93.488 11294 6532.2 16244 14567 22815 21968 18517 20087 16615 12795 18409 23112 14561 16506 17966 6994 19320 18278 10462 6051.1 16175 14136 23015 21599 18870 20450 17091 13634 18677 22735 15172 16731 18221 7853.5 18465 17245 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16323000 21948 862 20556 41389 33258 33258 1 9606 Homo sapiens -0.01523337515482126 QSLETICLLLAYK Unmodified 1550.8378 0.83781563 3705;3704;685 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;B4DJ75;B7ZB67;H0Y3Y6;C9JP48;B4E163;C9J9S3;P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;E9PMD7;B3KXM2;P62136-3;A0A024RBP2;F8W0W8;P36873;P36873-2;Q9UPN1;F8VYE8;F8VR82;A0A087WYY5 HEL-S-80p;PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 3 0 1 64.784 64.816 3 0.0012509 20471 20230619_1882_Aki_TMTPro18x_K_F3 82.069 64.633 13001 9695.7 11440 10058 8586.4 11801 13951 12269 13799 13892 14826 13808 15198 15474 14744 16173 13299 16990 12003 8884.6 11705 10161 9306.3 11810 13749 12547 14103 13954 15176 14086 15492 15935 14931 16285 12764 16115 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18493000 21949 3705;3704;685 20557 41390 33259 33259 1 9606 Homo sapiens 0.08443022991264115 QSLEYLEQVR Unmodified 1263.6459 0.64591575 2806 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;Q9BZE4-2;B4DHR2;Q9BZE4-3;O60747;Q5T3R7 GTPBP4 Nucleolar GTP-binding protein 1 yes no 0 0 0 4.5 0.5 1 1 51.463 51.514 2 9.0606E-05 14702 20230619_1883_Aki_TMTPro18x_K_F4 143.5 67.993 170390 135650 162710 177240 159400 169200 177430 171740 176660 184650 172980 177660 211850 156650 163990 212390 190680 195210 157470 124540 165960 175460 166240 171780 177870 175680 180010 185670 179370 180010 212570 165330 169340 211430 182220 185580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 187390000 21950 2806 20558 41391;41392 33260;33261 33260 2 9606 Homo sapiens 0.02463863355274043 QSLGELIGTLNAAK Unmodified 1413.7827 0.78274359 3674 V9HWK1;P60174;P60174-3;Q53HE2 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 2.5 0.5 1 1 62.662 62.682 3 5.9972E-29 19814 20230619_1881_Aki_TMTPro18x_K_F2 203.85 157.24 375620 321230 341010 393800 315100 668550 362700 364080 750270 494410 449610 537310 598520 484940 271770 1093300 201450 739670 347160 294650 349610 394930 334120 647320 374610 396360 729770 495060 481890 542880 590470 533590 283140 1066300 197160 704310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1200700000 21951 3674 20559 41393;41394 33262 33262 1 9606 Homo sapiens 0.09240352515030281 QSLIEDAR Unmodified 930.47706 0.47705951 3395 P07101-3;P07101-4;P07101-2;P07101;P07101-6;P07101-5;Q7KZ39;Q7KZ38;Q16846;Q15587;Q8IZQ6;O43816;Q8IZQ7;Q9NP14 TH Tyrosine 3-monooxygenase yes no 0 0 0 2.5 0.5 1 1 40.702 40.768 2 0.01262 10150 20230619_1881_Aki_TMTPro18x_K_F2 95.608 44.904 88816 66800 73605 177200 74818 77136 93720 93004 119080 123450 134040 150290 133880 112710 105720 122270 136840 155450 81968 62015 76671 168180 78154 85804 94179 94966 120480 123910 136870 149960 135310 118040 109810 124520 130750 147230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162030000 21952 3395 20560 41395;41396 33263 33263 1 9606 Homo sapiens 0.009040065124167995 QSLPATSIPTPASFK Unmodified 1543.8246 0.8246084 3613 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 3 0 1 58.014 58.044 3 0.00087827 17631 20230619_1882_Aki_TMTPro18x_K_F3 76.82 57.987 28817 21417 23892 26637 27913 29886 26052 25016 33808 28018 26002 32713 34517 30437 28629 33549 32674 36556 26593 19659 24752 26508 28645 29867 26610 25983 33697 28319 27462 32900 34693 31634 29466 33819 31250 34675 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44788000 21953 3613 20561 41397 33264 33264 1 9606 Homo sapiens 0.07444908203501654 QSLPPGLAVK Unmodified 1008.5968 0.59678072 531 A0A024R8P8;P63173 RPL38 60S ribosomal protein L38 yes no 0 0 0 1.75 0.829 2 1 1 50.525 50.567 3 0.00028768 14674 20230619_1881_Aki_TMTPro18x_K_F2 113.69 94.907 110590 99451 112960 112300 126160 136910 128680 119580 144730 123780 131400 122920 132450 98206 117410 146950 130970 123020 102340 91135 114750 112710 130040 136210 130080 123490 145960 124890 135420 124080 134350 104720 120570 145450 125120 117120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 491550000 21954 531 20562 41398;41399;41400;41401 33265;33266 33266 2 9606 Homo sapiens 0.09282619856981 QSLQVIESAMER Unmodified 1389.6922 0.69221402 3952 Q16740;M0R208 CLPP ATP-dependent Clp protease proteolytic subunit, mitochondrial;ATP-dependent Clp protease proteolytic subunit yes no 0 0 0 5 0 1 56.787 56.849 3 0.0023707 16649 20230619_1885_Aki_TMTPro18x_K_F5 73.502 44.415 70126 66953 83464 77883 101900 114080 100560 92801 129090 97675 83435 101170 98321 89317 87749 103390 99175 119000 65013 61360 83933 78241 104370 112130 102290 96397 128050 98655 88527 102070 99448 93272 90138 104490 94917 112780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30539000 21955 3952 20563 41402 33267 33267 1 9606 Homo sapiens 0.012955601950579876 QSLTMDPVVK Oxidation (M) 1132.5798 0.57981002 3544 P34932;B4DH02;V9HW33;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8;B0AZS1;B0AZT0;B4DN48 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 1 0 6 0 1 45.312 45.398 3 0.0014928 11848 20230619_1886_Aki_TMTPro18x_K_F6 85.958 68.094 91155 77821 95876 95789 109490 117840 116640 111180 136080 140320 130450 95717 125420 114440 116790 133990 145800 130040 84348 71386 97213 95561 112820 117340 117770 114770 137370 138940 133650 99945 127840 118490 120600 134060 139110 123610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177510000 21956 3544 20564 41403 33268 33268 2209 1 9606 Homo sapiens 0.018823311888581884 QSLVDMAPK Unmodified 987.50592 0.5059168 2873 E5KT65;P19388;B4DJ89;A0A087WWX0;A0A0A0MQR7;A0A087WVN5 POLR2E DNA-directed RNA polymerases I, II, and III subunit RPABC1 yes no 0 0 0 7 0 1 49.871 49.952 3 0.044825 13557 20230619_1887_Aki_TMTPro18x_K_F7 57.348 29.335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21957 2873 20565 41404 33269 33269 1 9606 Homo sapiens 0.01166407817208892 QSMAFSILNTPK Unmodified 1335.6857 0.68567208 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 4 0 1 59.663 59.665 3 3.7418E-05 18191 20230619_1883_Aki_TMTPro18x_K_F4 119.39 66.148 66571 56863 54843 58037 50914 64753 71050 60400 61451 58527 56828 49603 63565 46236 59055 67561 61806 60298 61483 52072 56668 58634 53793 64875 70148 61984 62961 58984 58789 50707 64398 48969 60329 67114 59099 57354 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101940000 21958 349;3906 20566 41405 33270 33270 1 9606 Homo sapiens 0.03125667034350954 QSMWSLLTALSGK Unmodified 1420.7384 0.73843593 2052 B4DRG7;E9PHA2;A8K4T8;Q15003;Q15003-2;H7C415 NCAPH Condensin complex subunit 2 yes no 0 0 0 7 0 1 65.785 65.81 3 6.4235E-08 20426 20230619_1887_Aki_TMTPro18x_K_F7 135.91 114.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21959 2052 20567 41406 33271 33271 1 9606 Homo sapiens 0.04489625097176031 QSNASSDVEVEEK Unmodified 1420.6318 0.63178183 3306 O75475;Q05CM9;O75475-3;O75475-2 PSIP1 PC4 and SFRS1-interacting protein yes no 0 0 0 1.5 0.5 1 1 39.333 39.366 3 2.5413E-05 9827 20230619_1880_Aki_TMTPro18x_K_F1 102.9 72.175 49084 27321 51026 53385 67057 85296 63626 74083 69893 46378 77724 74458 70431 64744 75861 46106 69690 68664 45311 25258 51947 52133 68377 83473 64575 75672 71030 49249 79053 74003 72381 66110 76535 48007 66732 64982 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228060000 21960 3306 20568 41407;41408 33272 33272 1 9606 Homo sapiens -0.06170878654302214 QSNNEANLREEVLK Unmodified 1642.8275 0.82746195 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B4DHD2;B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 1 4 0 1 42.818 42.862 3 8.7211E-07 10757 20230619_1883_Aki_TMTPro18x_K_F4 132.63 103.3 87009 70869 76877 80721 85710 91214 88093 86470 95618 104220 109140 107760 114830 90256 106860 125370 119130 107270 80375 64972 79088 80869 88391 91363 88935 89139 97582 104460 111590 108680 116590 95537 109580 124360 113780 102120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88840000 21961 3981 20569 41409 33273 33273 1 9606 Homo sapiens 0.031761315903622744 QSNPLLIHVDTK Unmodified 1363.746 0.74596415 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 8 0 1 48.312 48.378 3 8.6736E-07 12855 20230619_1888_Aki_TMTPro18x_K_F8 145.43 125.64 165430 151310 152290 184050 155950 193720 184730 203440 250480 203930 233920 284270 249870 222410 200280 278530 278910 321320 152980 138750 156080 183300 162780 195320 186640 207170 250600 208560 241740 282780 252320 234390 209320 281130 266390 304590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126140000 21962 3598 20570 41410 33274 33274 1 9606 Homo sapiens 0.07864100689107545 QSNSYDMFMR Oxidation (M) 1293.5118 0.51180681 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 1 0 6 0 1 44.486 44.575 2 0.04136 11517 20230619_1886_Aki_TMTPro18x_K_F6 65.157 54.349 59515 49509 57718 62356 60020 67311 65727 59743 72471 71506 71716 79088 85255 63022 73881 83875 92846 81364 55024 45430 58847 61974 62327 67517 66144 61901 73447 71870 74260 79386 85999 66676 76421 83782 88571 77349 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30610000 21963 1207 20571 41411 33275 33275 741 1 9606 Homo sapiens -0.12320861733451238 QSNSYDMFMR Unmodified 1277.5169 0.51689219 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 7 0 1 49.563 49.647 2 0.0035134 13417 20230619_1887_Aki_TMTPro18x_K_F7 96.957 83.579 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21964 1207 20571 41412 33276 33276 1 9606 Homo sapiens -0.1107655787081967 QSNVIADHR Unmodified 1038.5207 0.52065566 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1;F8VU51;H0YI23;B4DMQ9 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 0 4 0 1 27.907 27.981 3 4.9581E-05 4861 20230619_1883_Aki_TMTPro18x_K_F4 125.71 97.314 24395 13889 22502 23766 30742 26022 21515 23485 25765 21016 25840 22365 24526 18831 21427 17169 31621 24353 22500 12813 23130 23203 30982 26092 22374 24100 26004 21421 26423 22528 24922 19475 22376 17697 30106 23082 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 10994000 21965 3610 20572 41413 33277;33278 33277 2 9606 Homo sapiens 0.002936160095487139 QSPNSSSAAASVASR Unmodified 1418.675 0.67498405 4496 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 0 0 0 6.5 0.5 1 1 32.211 32.275 2 0.080153 6645 20230619_1886_Aki_TMTPro18x_K_F6 53.569 36.243 4034 3216.9 4821.2 5002.2 6903.2 7752.8 6507.5 7774.2 7313 6388.7 5563.8 5935 8804.6 3950.9 5576.2 5364.2 9480 8014.3 3735.6 2959.4 4865.7 4938.9 6994.1 7626.7 6609.7 7895 7339.9 6515.2 5932.3 5975.5 8710.4 4238 5939.3 5515 9022.5 7589.4 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2207100 21966 4496 20573 41414;41415 33279 33279 1 9606 Homo sapiens -0.017606440863801254 QSPTLQR Unmodified 828.44537 0.44536545 1976 A6NJA2;B2RD79;P54578-2;P54578-3;P54578;D3DUG9;B3KTG4 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 6 0.816 1 1 1 30.95 31.014 2 0.021789 6168 20230619_1886_Aki_TMTPro18x_K_F6 102.77 37.997 36111 20775 38328 42553 53909 60244 45563 54266 54094 33133 47751 47218 36959 42178 52703 24080 50449 43788 33346 19218 39011 41367 54550 59384 46704 55256 54284 35082 48846 47110 38884 42689 53025 25696 48245 41406 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 24970000 21967 1976 20574 41416;41417;41418 33280;33281 33281 2 9606 Homo sapiens 0.024280585491396778 QSQDEPLR Unmodified 971.46722 0.46722311 291 Q13148;A0A0A0N0L3;A0A024R4E2;A0A0A0N0N3;A0A087WYY0;A0A087X260;G3V162;B1AKP7;K7EN94;A0A0A0N0M3;K7EJM5;B4DRW3;A0A087WV68;A0A087WXQ5;Q13148-4;A0A087WXV3;A0A087WX67;A0A087WW61;A0A087WZC9 TARDBP;TDP43 TAR DNA-binding protein 43 yes no 0 0 0 1.5 0.5 1 1 31.056 31.089 2 0.00070706 6423 20230619_1880_Aki_TMTPro18x_K_F1 157.91 111.48 114930 60423 149420 150710 203040 239950 160040 190880 172940 120250 204380 254260 187670 173050 197760 88659 236120 213300 106300 56121 149740 145730 205540 234470 164400 196430 176450 129420 207860 248970 192640 176740 202390 97819 225390 201350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 185950000 21968 291 20575 41419;41420 33282;33283 33282 2 9606 Homo sapiens -0.019651814929488864 QSQQEAEEEEREEEEEAQIIQR Unmodified 2716.206 0.20598921 4579 Q9NQZ2 UTP3 Something about silencing protein 10 yes yes 0 0 1 1 0 1 46.557 46.557 3 6.2529E-127 12933 20230619_1880_Aki_TMTPro18x_K_F1 402.82 389.94 59583 48079 52305 63381 56441 69887 66271 63323 73569 70580 65358 66324 76312 64431 66483 70515 63651 69112 55035 44144 53884 62809 58642 69998 66458 65349 74231 70832 67933 67447 77059 66855 67644 70684 60966 65637 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129780000 21969 4579 20576 41421 33284;33285 33284 2 9606 Homo sapiens -0.08346554723493682 QSQQIAQDELR Unmodified 1314.6528 0.65279205 848 B7Z879;Q658K0;Q53FX3;A0A087WXL6;Q9H270;A0A0G2JS92 VPS11;DKFZp564P2364 Vacuolar protein sorting-associated protein 11 homolog yes no 0 0 0 2 0 1 38.216 38.279 2 5.8911E-17 9033 20230619_1881_Aki_TMTPro18x_K_F2 234.9 184.86 41006 28084 31159 40727 47684 48235 46274 47420 54131 48236 55816 59114 56584 49723 47468 55242 61475 55769 37803 25831 32777 40162 48182 48182 46967 48518 54752 49043 57233 59196 57315 51875 49241 55438 58644 52985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37815000 21970 848 20577 41422 33286 33286 1 9606 Homo sapiens 0.008051762358491033 QSQVSEFR Unmodified 979.47231 0.47230849 3024 H0Y613;Q14687-2;Q14687-3;Q14687;Q59GZ0 GSE1 Genetic suppressor element 1 yes no 0 0 0 4 0 1 35.76 35.808 2 0.01487 7844 20230619_1883_Aki_TMTPro18x_K_F4 93.598 56.039 41643 28974 43263 43564 53480 56662 45167 50297 46514 48146 61010 53734 50800 40766 55899 34949 51164 45875 38482 26659 43960 42949 54491 56142 46104 51744 47886 48928 61429 53848 52374 42197 56371 35903 48963 43476 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21942000 21971 3024 20578 41423 33287 33287 1 9606 Homo sapiens -0.01824877630338051 QSSAESDAWVLQFGEAENR Unmodified 2122.9556 0.95557559 4744 Q9Y586 MAB21L2 Protein mab-21-like 2 yes yes 0 0 0 2.5 0.5 1 1 60.7 60.72 3 2.2485E-19 18731 20230619_1882_Aki_TMTPro18x_K_F3 170.53 150.97 19713 16671 19872 16016 15147 22514 20736 21248 23996 20982 20733 19133 20410 19410 19161 26046 25588 23368 18233 15259 20088 16335 16305 22237 20690 21775 24120 21173 21402 19537 20806 20352 19899 25896 24405 22231 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63220000 21972 4744 20579 41424;41425 33288 33288 1 9606 Homo sapiens -0.06098397677033063 QSSFALLGDLTK Unmodified 1278.682 0.68196691 629;445 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;Q92973-3;A0A7P0T944;A0A7P0T9C0;B4DRY5;A0A024R7F7;O14787-2;Q4LE60;O14787;A0A075B780;Q05D48 TNPO1;TNPO2;TNPO2 variant protein Transportin-1;Transportin-2 no no 0 0 0 1.67 0.471 1 2 62.371 62.376 2;3 1.5189E-07 19710 20230619_1881_Aki_TMTPro18x_K_F2 146.07 126.28 33955 32051 33870 41139 30609 37472 38838 33671 38059 41225 43441 37185 44463 33430 41337 51604 45940 47966 31427 29403 34415 40736 32290 38077 38658 34894 39041 41134 44324 37854 45170 35590 42402 51324 43925 45590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227750000 21973 629;445 20580 41426;41427;41428 33289;33290 33290 2 9606 Homo sapiens 0.05377320532124941 QSSGASSSSFSSSR Unmodified 1360.5855 0.58550034 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;Q5S4N1;A0A0J9YVQ7;A0A087WVZ1 DDX3X ATP-dependent RNA helicase DDX3X yes no 0 0 0 6 0.707 1 2 1 29.857 29.919 2;3 2.6653E-07 5669 20230619_1885_Aki_TMTPro18x_K_F5 118.52 105.96 10951 7662.5 12962 11166 18614 22062 16433 15858 13764 13863 12154 16501 17506 13021 15470 8836 18916 15660 10133 7047.4 13078 11126 18826 21328 16612 16568 14129 14198 12816 16482 17590 13344 15916 9352.4 18043 14814 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 74247000 21974 1018 20581 41429;41430;41431;41432 33291;33292 33291 2 9606 Homo sapiens -0.08036898765772094 QSSLEPVAFR Unmodified 1132.5877 0.58767259 974 P57737-3;A0A0A6YYL4;P57737;P57737-4;P57737-2;B3KSY4;B3KUH7;B4DKU9;I3L351;I3L442 CORO7;CORO7-PAM16;hCG_1787779 Coronin-7;Coronin yes no 0 0 0 6.5 0.5 1 1 47.407 47.492 2 0.0047118 12795 20230619_1886_Aki_TMTPro18x_K_F6 96.171 79.146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21975 974 20582 41433;41434 33293;33294 33293 2 9606 Homo sapiens 0.026682265006456873 QSSQLDEDRTEAANR Unmodified 1718.782 0.78196832 236 A0A024R3C7;Q13315;B4DSP3;Q68DE6 ATM;DKFZp781A0353 Serine-protein kinase ATM yes no 0 0 1 1 0 1 30.452 30.452 3 3.6715E-25 6151 20230619_1880_Aki_TMTPro18x_K_F1 227.67 198.7 23162 17557 23322 22009 32885 29922 29426 28266 33739 27650 34079 33394 32093 25565 29343 31307 39709 35198 21408 16115 23807 21970 33260 29634 29997 28971 34120 28159 34855 33385 32686 26943 30467 31580 37862 33407 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40922000 21976 236 20583 41435 33295 33295 1 9606 Homo sapiens -0.04867138662666548 QSSSSRDDNMFQIGK Oxidation (M) 1714.7581 0.75806175 3649 Q6IBA2;Q59G24;P53999;B7Z1Z0 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes no 0 1 1 6 0 1 40.707 40.799 3 0.00072076 9876 20230619_1886_Aki_TMTPro18x_K_F6 87.727 58.742 53186 63117 59345 49189 66217 45772 57982 61336 50878 57252 62956 44380 53723 40802 60165 60446 60481 51411 49365 57626 59773 50897 67752 47048 58773 61453 52753 57643 63518 45612 55390 43269 61084 59921 57802 48960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63386000 21977 3649 20584 41436 33296 33296 2339 1 9606 Homo sapiens -0.07072695420720265 QSSSTNYTNELK Unmodified 1370.6314 0.6313879 3999 Q53GG0;Q9UHB6;F8VQE1;B4DN52;Q9UHB6-2;Q9UHB6-4;Q9UHB6-5;F8VRN8 LIMA1 LIM domain and actin-binding protein 1 yes no 0 0 0 5.5 0.5 1 1 42.609 42.698 2 6.3066E-05 10634 20230619_1886_Aki_TMTPro18x_K_F6 141.73 95.729 8918.7 7684.8 7301.8 10426 8809.7 10955 10855 9295.6 10057 13506 12220 10755 17611 9892.3 9616.1 15282 12986 12433 8237.2 7056.3 7597.1 10302 9095.3 10996 10797 9728 10399 13335 12654 11022 17388 10540 10136 15093 12388 11841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18725000 21978 3999 20585 41437;41438 33297 33297 1 9606 Homo sapiens -0.03910253583512713 QSSTPGSLFLSPPAPAPK Unmodified 1780.9359 0.93594977 2828 Q9H4A3-7;Q9H4A3;D3DUP1;F5GWT4;D3DUP2;Q9H4A3-6;Q9H4A3-2;Q9H4A3-5;F6UYG0 WNK1 Serine/threonine-protein kinase WNK1 yes no 0 0 0 3 0 1 57.704 57.737 3 1.5866E-06 17521 20230619_1882_Aki_TMTPro18x_K_F3 104.76 94.976 39913 38179 38167 40249 33536 40470 42956 43301 39051 47314 44743 44572 54962 42822 49429 45623 44157 45521 36932 34958 38867 40505 35465 40980 42663 44146 40281 47496 46095 45304 55464 44402 50047 45816 42310 43233 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31551000 21979 2828 20586 41439 33298 33298 1 9606 Homo sapiens 0.0767192284081375 QSSVLER Unmodified 817.42938 0.42938104 3440 P12270;P12270-2;Q58F23;Q504U6;A0PJC9 TPR Nucleoprotein TPR yes no 0 0 0 3.5 0.5 1 1 33.171 33.235 2 0.04265 6807 20230619_1883_Aki_TMTPro18x_K_F4 89.542 25.278 57575 29580 71024 69191 87504 92232 61957 78507 78888 62549 94783 92126 80073 75184 79623 42636 100280 89463 53217 27443 71242 66843 88865 91128 64568 80683 79961 64994 95830 91558 82219 76414 81895 46124 95669 84515 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93286000 21980 3440 20587 41440;41441 33299 33299 1 9606 Homo sapiens 0.01336352312227973 QSSVTQVTEQSPK Unmodified 1417.7049 0.7048872 2068 D6W5H1;A8K583;Q14966-4;Q14966-3;Q14966;B4DF54;Q14966-2;Q14966-6;C9JWN0 ZNF638 Zinc finger protein 638 yes no 0 0 0 6 0 1 40.993 41.088 3 2.3097E-08 9982 20230619_1886_Aki_TMTPro18x_K_F6 149.96 134.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21981 2068 20588 41442 33300 33300 1 9606 Homo sapiens 0.012742948589448133 QSSYSQQPYNNQGQQQNMESSGSQGGR Oxidation (M) 2990.2445 0.24451675 4307 Q92804-2;Q92804;A0A075B7E4;A0A0J9YY24 TAF15 TATA-binding protein-associated factor 2N yes no 0 1 0 4.5 0.5 1 1 33.781 33.835 3 1.2342E-05 7086 20230619_1883_Aki_TMTPro18x_K_F4 81.763 79.186 2893.9 2638.1 2051.9 3339.6 3718 2201.1 2921.8 2988.9 3200.1 3934.6 3794.1 4699.5 5136.1 3426.4 3276.1 4362.4 4807.4 4997.8 2671.4 2420.1 2184.7 3298.9 3695.8 2336.1 3000.5 3026.2 3274.9 3945.6 3927.6 4689 5105.4 3630.8 3454.3 4400.7 4586.2 4739.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71589000 21982 4307 20589 41443;41444 33301;33302 33301 2722 2 9606 Homo sapiens -0.1709957236066657 QSSYSQQPYNNQGQQQNMESSGSQGGR Unmodified 2974.2496 0.24960213 4307 Q92804-2;Q92804;A0A075B7E4;A0A0J9YY24 TAF15 TATA-binding protein-associated factor 2N yes no 0 0 0 5 0 1 36.392 36.483 4 7.4353E-14 8100 20230619_1885_Aki_TMTPro18x_K_F5 135.58 129.41 2572.3 1506.4 2828.7 3021.2 4049.8 3059 4005.4 3855.1 3667.6 3187.1 3793.6 3064.3 4356 3215.2 3240.8 5133.1 4155.7 5521.1 2376.2 1392.8 2870.6 2925.5 4094.7 3109.5 4029.8 3865.5 3759.7 3253.1 3905.3 3130.4 4372.5 3416.7 3376.7 5141.8 3976.7 5234.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15453000 21983 4307 20589 41445 33303 33303 1 9606 Homo sapiens -0.15855268498080477 QSTDEEVTSLAK Unmodified 1306.6252 0.62523989 1319 P23193;A0A384MTX4;A0A1W2PPZ5;B7Z4W0;P23193-2;A0A1W2PRL9;E5RIS7;E5RJ93 TCEA1 Transcription elongation factor A protein 1 yes no 0 0 0 2 0 1 46.308 46.387 2 1.6125E-06 12785 20230619_1881_Aki_TMTPro18x_K_F2 174.9 138.57 30336 23623 23792 30153 31231 35602 31461 30982 36468 45829 49608 54056 54660 47867 37100 57956 58413 56658 27992 21686 24866 29972 31889 35479 31865 32369 37436 45761 50504 54287 54815 50098 39325 57944 55671 53834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54943000 21984 1319 20590 41446 33304 33304 1 9606 Homo sapiens -0.01580771815042681 QSTGSAPQGPAYHGVNR Unmodified 1725.8183 0.81829425 1061 A0A0S2Q0B1;O14497;H0Y488;A0A1B0GTU5;O14497-3;Q96TA9;Q4LE49 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A yes no 0 0 0 7.5 0.5 1 1 31.057 31.111 3 1.2468E-18 6019 20230619_1888_Aki_TMTPro18x_K_F8 184.99 172.32 9700 6413.3 8869.6 9869.5 11223 12628 7947 8412.1 9816.6 9962.5 12088 11985 12990 10154 9314.6 10853 14550 13613 8952.2 5903.9 9117.7 9709.4 11392 12459 8268.1 8928 9990.4 10051 12328 12012 13052 10580 9832.6 11044 13864 12904 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77285000 21985 1061 20591 41447;41448 33305;33306 33306 2 9606 Homo sapiens -0.015582169753088237 QSTIVCHNR Unmodified 1113.5349 0.53492552 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;F5GWI0 DDB1 DNA damage-binding protein 1 yes no 0 0 0 6.33 1.25 1 1 1 26.609 26.656 3 2.4205E-05 4524 20230619_1888_Aki_TMTPro18x_K_F8 157.96 129.56 7756.7 6896.1 9551.1 9492.4 14271 10634 7885.3 10441 9173.1 8454.8 10961 12185 8234.8 8842.7 9583.3 6373.1 10088 9268.8 7190.1 6332.4 9613.3 9387.3 14236 10674 8374.8 10622 9345.8 8760.8 11052 12076 8566.2 9093.5 9730.7 6619.4 9641.7 8775.8 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 21236000 21986 1710 20592 41449;41450;41451 33307;33308;33309 33309 3 9606 Homo sapiens -0.017300548338198496 QSTLYSFFPK Unmodified 1216.6128 0.61282471 1853 P52701;A0A8V8TQJ0;P52701-3;P52701-2;Q1L838;A0A8V8TPJ4;Q3SWU9;A0A8V8TPR2;F8WAX8;F8W7G9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 4.5 0.5 1 1 61.592 61.618 3 0.029939 19045 20230619_1883_Aki_TMTPro18x_K_F4 55.806 22.581 63902 61243 61458 71071 59572 75104 77638 70006 68784 75990 83268 73667 81128 58766 87212 72125 70237 69040 59133 56125 62688 71019 62549 75512 76959 72061 71164 76380 84627 74408 83050 61863 87555 72148 67358 65611 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59983000 21987 1853 20593 41452;41453 33310 33310 1 9606 Homo sapiens 0.013182813032244667 QSTQVMAASMSAFDPLK Unmodified 1810.8594 0.8593557 1631 Q92734;Q92734-2;A0A6Q8PFY7;Q7Z426;Q92734-3;A0A6Q8PG04;A0A6Q8PF40;Q05BK6;Q7Z427;A0A6Q8PGS4;Q8TDJ5;A0A6Q8PG00;A0A6Q8PH27;A0A6Q8PH89;A0A6Q8PFC4;Q92734-4;C9JJP5 TFG;TFG/ALK fusion Protein TFG;Tyrosine-protein kinase receptor yes no 0 0 0 2 0 1 62.427 62.436 3 5.2497E-05 19724 20230619_1881_Aki_TMTPro18x_K_F2 94.01 81.455 44019 36745 49930 53426 45643 64229 56032 64624 66087 63732 49216 54173 60285 53935 61942 67859 59219 68320 40753 33771 50208 52709 48130 64075 56222 65924 66126 64170 51830 55415 61281 56384 62844 67975 56750 64852 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276220000 21988 1631 20594 41454 33311 33311 1 9606 Homo sapiens -0.013639600423402953 QSTQVMAASMSAFDPLK 2 Oxidation (M) 1842.8492 0.84918495 1631 Q92734;Q92734-2;A0A6Q8PFY7;Q7Z426;Q92734-3;A0A6Q8PG04;A0A6Q8PF40;Q05BK6;Q7Z427;A0A6Q8PGS4;Q8TDJ5;A0A6Q8PG00;A0A6Q8PH27;A0A6Q8PH89;A0A6Q8PFC4;Q92734-4;C9JJP5 TFG;TFG/ALK fusion Protein TFG;Tyrosine-protein kinase receptor yes no 0 2 0 7 0 1 52.92 52.991 3 0.0067757 14938 20230619_1887_Aki_TMTPro18x_K_F7 63.145 51.884 34701 32242 32240 31651 29571 36257 36919 35911 38585 40031 42397 39522 42505 36010 40152 39969 42714 42464 32095 29508 32918 32101 31153 36316 36858 36818 39370 40217 43309 40032 43263 37478 41011 40246 40842 40307 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83207000 21989 1631 20594 41455 33312 33312 1056;1057 1 9606 Homo sapiens -0.038525677675806946 QSTQVMAASMSAFDPLK Oxidation (M) 1826.8543 0.85427033 1631 Q92734;Q92734-2;A0A6Q8PFY7;Q7Z426;Q92734-3;A0A6Q8PG04;A0A6Q8PF40;Q05BK6;Q7Z427;A0A6Q8PGS4;Q8TDJ5;A0A6Q8PG00;A0A6Q8PH27;A0A6Q8PH89;A0A6Q8PFC4;Q92734-4;C9JJP5 TFG;TFG/ALK fusion Protein TFG;Tyrosine-protein kinase receptor yes no 0 1 0 8 0 2 58.05 58.098 3 8.6764E-07 17279 20230619_1888_Aki_TMTPro18x_K_F8 114.96 98.279 66755 67141 71062 68345 71910 85364 84199 72640 88150 84091 82631 71762 80384 61141 75070 80072 83481 82973 61848 61449 71843 69185 74977 84759 84283 75410 89360 84017 84873 73079 81818 64477 76921 80306 79789 78780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 258100000 21990 1631 20594 41456;41457 33313;33314 33314 1056;1057 2 9606 Homo sapiens -0.026082639049718637 QSTVDPTHCPYGHFR Unmodified 1800.8002 0.80020134 1619 E5RJD5;A0A6Q8PF73;A0A6Q8PFX5;A0A6Q8PFH3;Q9H5K3 POMK Protein O-mannose kinase yes no 0 0 0 7 0 1 36.714 36.782 4 1.7126E-07 7999 20230619_1887_Aki_TMTPro18x_K_F7 128.06 113.83 13901 11106 13919 15727 17067 16423 17875 14761 18460 17280 21645 23173 20686 17695 21000 18756 21397 21463 12852 10205 14195 15505 17477 16520 17988 15278 18891 17509 22031 23063 21155 18488 21358 18992 20469 20357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26422000 21991 1619 20595 41458 33315 33315 1 9606 Homo sapiens -0.06816675221671176 QSTVLAPVIDLK Unmodified 1282.7497 0.74965254 4084 Q5W009;Q96I25;Q5W011;Q5W010;Q5W012 RBM17 Splicing factor 45 yes no 0 0 0 1 0 1 60.971 60.971 3 8.3173E-05 18856 20230619_1880_Aki_TMTPro18x_K_F1 113.35 84.26 43600 35554 40050 47579 38810 52226 47369 51326 56125 54768 49501 48651 56051 45589 50379 58721 51522 56367 40288 32648 41021 47107 40733 52403 47542 52572 56437 54983 51382 49575 56716 47837 51440 58641 49318 53544 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199430000 21992 4084 20596 41459 33316 33316 1 9606 Homo sapiens 0.11958770462933899 QSTWEKPDDLK Unmodified 1345.6514 0.65139506 1683 A0A8Q3SIG7;A0A8V8TM87;A0A8V8TM61;F5H578;A0A7N4I394;O75400-2;O75400;O75400-3;Q05C41;H0YG38 PRPF40A Pre-mRNA-processing factor 40 homolog A yes no 0 0 1 5.5 0.5 1 1 46.89 46.973 3 0.00012111 12465 20230619_1885_Aki_TMTPro18x_K_F5 117.79 85.168 322920 294970 347910 344170 340640 404930 399750 366250 444210 423200 437800 438710 474040 349580 339540 410470 487870 433920 299000 270370 351280 344410 356140 403950 400970 378430 449770 425170 450900 441530 476020 367060 356170 412630 464980 412090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136370000 21993 1683 20597 41460;41461 33317;33318;33319 33317 3 9606 Homo sapiens -0.007604578529026185 QSVEHFTK Unmodified 974.48214 0.48214489 4151 Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;Q7L1Q6-2;D3DN77;C9IZ80;B3KU41 BZW1;hCG_2022736 Basic leucine zipper and W2 domain-containing protein 1 yes no 0 0 0 6 0 1 37.269 37.337 3 0.010449 8461 20230619_1886_Aki_TMTPro18x_K_F6 73.841 57.95 59556 43239 57620 64287 75609 83800 69040 74288 77854 63196 69280 74354 66131 62822 62769 65135 83579 80440 55016 39771 59005 63410 76951 83005 70273 76233 78442 64826 71385 74570 67507 65294 65044 66271 79745 76252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48424000 21994 4151 20598 41462 33320 33320 1 9606 Homo sapiens -0.006116896249523052 QSVELCK Unmodified 862.42185 0.42185282 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;J3KS13;A0A8V8TQK7 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 5.5 0.5 1 1 42.394 42.477 2 0.0016871 10548 20230619_1886_Aki_TMTPro18x_K_F6 127.56 78.771 114800 57731 137450 135620 147950 193490 144040 173340 167130 133160 167350 217050 196110 169980 154460 100170 249830 237350 106070 53572 137930 131170 152950 190530 146290 177320 168860 139310 173250 214630 197370 173360 162720 109650 238020 224030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73364000 21995 826 20599 41463;41464 33321;33322 33322 2 9606 Homo sapiens -0.014861232796874901 QSVLEGLSFSR Unmodified 1221.6354 0.63535107 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;A0A0C4DG79;A0A494C0Y9 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 0 0 1 0 1 56.491 56.491 3 0.043931 17040 20230619_1880_Aki_TMTPro18x_K_F1 56.139 22.061 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21996 1839 20600 41465 33323 33323 1 9606 Homo sapiens 0.03339880700832509 QSYYSIAK Unmodified 958.476 0.47599688 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 1.5 0.5 1 1 46.253 46.293 2 0.0022708 12851 20230619_1880_Aki_TMTPro18x_K_F1 129.38 77.389 249460 241210 247100 230320 384250 464830 332650 321520 403170 144510 147340 128980 111730 100900 225310 140000 158170 123390 230910 220670 253250 236630 387310 448890 340260 333470 395770 155670 161770 130930 120690 107040 222920 139410 151740 117500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122480000 21997 2126 20601 41466;41467 33324;33325 33324 2 9606 Homo sapiens -0.004902078564896328 QTAAQLILK Unmodified 984.59678 0.59678072 3298 O75367;O75367-3;O75367-1;B4DJC3;Q59FH0 H2AFY Core histone macro-H2A.1;Histone H2A yes no 0 0 0 2.5 0.5 1 1 52.705 52.751 3 0.029347 15685 20230619_1881_Aki_TMTPro18x_K_F2 58.37 11.303 56790 43547 58984 68735 58852 80633 80477 58133 98304 62144 72111 71701 76956 52444 77648 63795 90556 68731 52509 40075 59831 67430 61853 80044 80345 61141 97943 62981 75443 71699 78361 55394 79566 64250 86368 65308 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207420000 21998 3298 20602 41468;41469 33326 33326 1 9606 Homo sapiens 0.10386619857013102 QTAAQVTLK Unmodified 958.54475 0.54474515 55 Q9P0M6;A0A024QZP6;A0A7I2V423;A0A7I2V412 H2AFY2 Core histone macro-H2A.2;Core histone macro-H2A yes no 0 0 0 4.5 3.5 1 1 42.942 42.942 2;3 1.5493E-06 10695 20230619_1888_Aki_TMTPro18x_K_F8 148.32 55.882 150990 103930 129300 162870 173610 203090 164610 158500 220700 164280 183180 195290 186100 142310 149160 192090 228210 179500 139310 95680 134040 159990 176830 201180 168140 165200 220010 166800 189850 195050 188090 151190 156900 191400 217250 170800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91477000 21999 55 20603 41470;41471 33327;33328 33328 2 9606 Homo sapiens 0.063814564432505 QTADFLQEYVTNK Unmodified 1555.7518 0.75183739 1708 A0A7P0TAE3;Q9ULX6;A0A7P0TAJ5;A0A140VKH3;Q9ULX6-2 AKAP8L A-kinase anchor protein 8-like yes no 0 0 0 6.5 0.5 1 1 60.772 60.822 3 4.3279E-11 18128 20230619_1887_Aki_TMTPro18x_K_F7 182.43 150.1 110500 99887 104290 129040 113570 131850 131390 121750 133020 139620 134860 145420 138690 127470 142480 149600 144300 156710 102200 91655 106770 127910 117750 132870 131470 125620 135570 140320 138570 146720 141670 133220 144960 150360 138140 148720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108550000 22000 1708 20604 41472;41473 33329 33329 1 9606 Homo sapiens -0.003808455899161345 QTALVELLK Unmodified 1013.6121 0.61209643 2776 CON__P02769 yes yes 0 0 0 4.5 3.5 1 1 61.258 61.274 2 7.492E-12 18978 20230619_1880_Aki_TMTPro18x_K_F1 225.72 156.93 + 113660 299570 328780 124630 828640 1058700 485510 446270 767020 286870 270450 384020 163830 223220 280310 285290 394720 710060 108200 272310 322650 152710 813110 985470 517310 493080 744570 302970 297070 379610 177190 239160 289450 309160 378740 668770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174310000 22001 2776 20605 41474;41475 33330;33331 33330 2 9606 Homo sapiens 0.1058348665419544 QTAQGMDYLHAK Unmodified 1361.6398 0.63978452 1327;1100;132;2859 A0A1W6S962;H7C4S5;D7PBN4;A0A2R8Y492;H7C560;A0A2U3TZI2;A0A2R8Y8E0;Q5IBP5;P15056;D7RF68;P04049-2;A0A8I5KQV4;C7TPG7;A0A0S2Z559;L7RRS6;A0A8I5KSV6;A0A0S2Z4L5;A0A8I5KTA5;A0A8I5KWF7;A0A8I5KSB0;B4E0X2;B4E1N6;H7C155;D7PBN3;P04049;A0A8I5QKU8;A0A8I5KS16;A0A8I5KYC4;A0A024R178;A0A0S2Z3F2;P10398;B4DV85;Q96II5 BRAF;RAF1;SRGAP3:RAF1;ARAF Serine/threonine-protein kinase B-raf;RAF proto-oncogene serine/threonine-protein kinase;Serine/threonine-protein kinase A-Raf no no 0 0 0 7 0 1 43.193 43.272 3 0.00018823 10605 20230619_1887_Aki_TMTPro18x_K_F7 99.481 70.675 87420 63038 79030 87856 101110 115840 97889 91084 126330 88906 98331 89210 101470 87035 98955 92601 99011 96973 80711 57941 81373 86999 103290 114410 99713 94716 125860 90098 102290 90521 103360 90155 100630 93244 94719 92066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59559000 22002 1327;2859;1100;132 20606 41476 33332 33332 1 9606 Homo sapiens -0.026569781479111043 QTAQQIVSHVQNK Unmodified 1479.7794 0.77938954 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;Q9NZB2-5;Q9NZB2-2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 0 0 2 0 1 43.134 43.216 3 6.0252E-05 11339 20230619_1881_Aki_TMTPro18x_K_F2 109.83 104.11 55836 41706 45691 60035 60942 61455 61670 69798 77344 63959 70157 70601 72944 61996 62956 72171 77655 68891 51524 38342 47571 59113 62115 62219 62620 70552 77584 65164 72433 71099 73901 64762 65051 72159 74097 65500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176810000 22003 1839 20607 41477 33333 33333 1 9606 Homo sapiens 0.058691024609970555 QTATQLLK Unmodified 901.52328 0.52328142 3722 P62424;Q5T8U3 RPL7A 60S ribosomal protein L7a yes no 0 0 0 2.8 2.64 2 2 1 45.8 45.841 2;3 3.3174E-05 12640 20230619_1880_Aki_TMTPro18x_K_F1 189.82 63.547 1155000 899110 1002300 1079200 1201600 1315800 1212900 1204600 1561800 1066000 1070800 899250 1086800 845420 1038200 1248100 1244500 903310 1066500 824840 1034400 1078200 1233500 1310100 1232500 1234400 1550400 1080900 1121300 920040 1106400 895100 1069000 1227900 1186400 862870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2338000000 22004 3722 20608 41478;41479;41480;41481;41482 33334;33335;33336 33334 3 9606 Homo sapiens 0.06858071414512779 QTAVSVENFIAELLPDK Unmodified 1872.9833 0.98329389 4380 Q96M27-5;Q96M27;Q96M27-3;Q96M27-2 PRRC1 Protein PRRC1 yes no 0 0 0 7.5 0.5 1 1 66.83 66.851 3 0.004231 20670 20230619_1888_Aki_TMTPro18x_K_F8 68.576 52.454 3326.4 2592.4 4143.6 3439.5 4233.8 3941.3 3230.4 4171.4 3910 3352 3895.2 2894.8 3819 4084.4 4205 3627.5 3695.6 4267.5 3081.2 2380.7 4136.3 3412.4 4356.9 3953.9 3342 4220.2 3943.7 3419.6 3988.3 3005.4 3923.3 4148 4238 3690.9 3544.8 4044.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13803000 22005 4380 20609 41483;41484 33337 33337 1 9606 Homo sapiens 0.08172157321155282 QTDVGITHFR Unmodified 1172.5938 0.5938206 1863 A0A994J491;Q6P2Q9;A0A994J6E8;B4DK16 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 6.5 0.5 1 1 38.696 38.769 3 1.7965E-14 9033 20230619_1886_Aki_TMTPro18x_K_F6 213.35 98.341 111440 70231 105670 125710 120340 138190 125560 123730 147530 124110 123820 131930 133720 120850 122700 127430 147660 126800 102860 64799 108180 122430 124050 138360 126960 127440 148070 125720 128650 133170 135720 125340 126360 127930 140900 120510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 292450000 22006 1863 20610 41485;41486 33338;33339 33338 2 9606 Homo sapiens 0.014427447322077569 QTDVLQQLSIQMANAK Unmodified 1786.9247 0.92473315 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2 0 1 62.694 62.703 3 3.2897E-06 19845 20230619_1881_Aki_TMTPro18x_K_F2 115.38 98.103 139080 119010 99014 139290 106240 123900 122220 146890 131170 150010 151520 155440 169510 138500 169320 160930 161650 176940 128330 109110 104270 138800 110370 126990 122660 148510 134040 151510 155360 156980 172350 144670 171710 162290 154850 167840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126180000 22007 3881 20611 41487 33340 33340 1 9606 Homo sapiens 0.06274777475027804 QTEDSLASER Unmodified 1134.5153 0.51529551 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 0 1 0 1 33.567 33.567 2 2.688E-09 7395 20230619_1880_Aki_TMTPro18x_K_F1 219.03 177.6 46430 22123 50921 49063 53813 72932 52391 54952 59248 51009 83238 109090 76976 76019 78889 35607 96979 99095 42855 20515 51401 47586 55732 71430 53162 57291 60846 53534 84184 106810 78921 77372 80934 40137 92628 93441 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53882000 22008 380 20612 41488 33341 33341 1 9606 Homo sapiens -0.04658152363572299 QTEDSLASERDR Unmodified 1405.6433 0.64334957 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 1 1 0 1 30.188 30.188 3 1.0421E-17 6067 20230619_1880_Aki_TMTPro18x_K_F1 221.09 178.54 48334 36474 54232 47412 52833 46959 49159 57543 55211 57422 66300 65418 65655 50344 63265 50164 74119 61202 44717 33492 54515 47008 54789 47790 50028 58026 56359 58246 67471 65515 66878 52458 64891 51081 70723 58061 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91257000 22009 380 20613 41489 33342 33342 1 9606 Homo sapiens -0.04324636840351559 QTELFAHFIQPAAQK Unmodified 1727.8995 0.89950468 2629 B7ZAX9;B4DZC0;O60264;Q4W5G3 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 2.5 0.5 1 1 56.564 56.591 3 1.2331E-07 17184 20230619_1881_Aki_TMTPro18x_K_F2 126.77 97.794 113460 87781 102680 108720 111200 124000 116210 113890 134850 114240 123830 110520 132210 107990 131760 131270 126480 123610 104800 80557 105370 108270 115020 123990 117460 117070 135830 115390 127870 112380 134610 112720 133690 131130 121050 117490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 332220000 22010 2629 20614 41490;41491 33343;33344 33343 2 9606 Homo sapiens 0.0646709073475904 QTELFAHFIQPSAQK Unmodified 1743.8944 0.8944193 940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370;D7EZH4 SMARCA1 Probable global transcription activator SNF2L1 yes no 0 0 0 2 0 1 55.741 55.762 4 0.0016835 16916 20230619_1881_Aki_TMTPro18x_K_F2 72.634 55.972 23659 18682 22129 27145 24625 28255 27122 22772 30655 26793 28497 31828 25379 23305 25688 29266 26117 27958 21861 17173 22677 26712 25461 28352 27299 23775 30930 27026 29229 31780 26028 24620 26162 29233 24997 26562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14826000 22011 940 20615 41492 33345 33345 1 9606 Homo sapiens 0.05222786872127472 QTESLESLLSK Unmodified 1233.6452 0.64524705 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 6 0.816 1 1 1 59.794 59.847 3 7.8724E-05 18035 20230619_1886_Aki_TMTPro18x_K_F6 122.42 50.868 74608 60546 67595 80118 83455 95023 97569 90518 104390 94136 103670 117640 106330 95439 113860 116550 106200 124530 68930 55592 69586 79469 85837 94830 97724 92904 105890 95670 106650 117590 108820 100270 115250 117230 101810 118120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 516570000 22012 673 20616 41493;41494;41495 33346 33346 1 9606 Homo sapiens 0.037770239155634044 QTESTSFLEK Unmodified 1168.5612 0.56118307 1226 G3V295;A0A140VK44;G3V5Z7;P60900;P60900-2;P60900-3;Q59F72 PSMA6 Proteasome subunit alpha type;Proteasome subunit alpha type-6 yes no 0 0 0 5 0 1 48.066 48.143 2 0.022557 12951 20230619_1885_Aki_TMTPro18x_K_F5 87.789 59.092 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22013 1226 20617 41496 33347 33347 1 9606 Homo sapiens -0.016355071813450195 QTEVETVMSEVSGFPMPQLDPR Unmodified 2476.1614 0.16141096 3871 Q13895;H7BY94 BYSL Bystin yes no 0 0 0 5.5 0.5 1 1 64.902 64.946 3 4.9709E-05 20339 20230619_1886_Aki_TMTPro18x_K_F6 79.635 64.865 2959 2925.2 3679.3 3412.4 3841.4 4561.2 4013.4 4748.9 3869.8 3255.3 3987.5 3955.7 6377.7 3123.7 2865.2 4186.6 6473.9 5573.2 2745.2 2680.6 3679.1 3423.1 3981.1 4528.1 4035.4 4795.3 3955.2 3390.2 4185.9 3959.3 6254 3318.8 3180.6 4262.4 6153 5282.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27773000 22014 3871 20618 41497;41498 33348 33348 1 9606 Homo sapiens -0.017623286043544795 QTEVLLQPNPSAR Unmodified 1451.7732 0.77324153 505 B7ZC39;A0A024R896;B7ZC38;Q9NR46;Q9NR46-2;F8WFB9 SH3GLB2 Endophilin-B2 yes no 0 0 0 6 0 1 45.308 45.394 3 0.024132 11872 20230619_1886_Aki_TMTPro18x_K_F6 55.414 39.524 36074 30025 35531 39992 39341 37951 40791 40075 46778 36932 42549 37506 39767 34381 42553 37424 41279 42254 33356 27567 36217 39536 40563 38590 41229 40722 47110 37527 43709 37967 40809 35737 43123 37849 39514 40078 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29404000 22015 505 20619 41499 33349 33349 1 9606 Homo sapiens 0.0654258422946441 QTFCSSQTTSNTSR Unmodified 1603.6896 0.68964784 1012 B4DDR0;A0A0C4DH01;Q53GZ2;Q9NVU0-3;Q9NVU0-2;Q9NVU0-5;Q9NVU0-4;Q9NVU0;H3BM46;H3BRY1;H3BMR4 POLR3E DNA-directed RNA polymerase III subunit RPC5 yes no 0 0 0 7 0 1 32.579 32.666 3 1.0983E-08 6405 20230619_1887_Aki_TMTPro18x_K_F7 152.95 145.89 1058.2 2096.8 4757 3241.1 2575 4615.4 4435.1 4232.9 5202.9 3438.7 3741.3 3235.8 4065.8 2836.5 4418.6 3021 4886.3 4065.9 1015.5 1924.4 4486.2 3198.5 2901.2 4547 4389 4328.5 5190.8 3515.3 3919.8 3282.2 4153.1 2954.2 4504.2 3095.6 4665 3853.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7915300 22016 1012 20620 41500 33350 33350 1 9606 Homo sapiens -0.08804940000550232 QTFEAAILTQLHPR Unmodified 1623.8733 0.87328993 4560 Q9NPD3;A0A994J4D9;E9PI41 EXOSC4 Exosome complex component RRP41 yes no 0 0 0 2 0 1 58.56 58.574 3 6.2021E-37 18009 20230619_1881_Aki_TMTPro18x_K_F2 270.75 231.12 36922 35070 40622 34430 32060 36484 36789 33701 41954 34290 33295 29677 39323 29623 36479 38513 37657 38559 34203 32093 40789 34890 34108 36695 36990 34648 42091 34506 34813 30362 39785 31055 37220 38554 36025 36620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99640000 22017 4560 20621 41501 33351 33351 1 9606 Homo sapiens 0.08630821563247082 QTFENQVNR Unmodified 1134.5418 0.54178503 1633 A0A6Q8PGB0;P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 0 4 0 1 35.743 35.791 2 0.00061213 7824 20230619_1883_Aki_TMTPro18x_K_F4 129.63 75.014 55811 32150 47584 52305 57473 58098 50015 54588 73893 59727 66641 67683 69804 57737 55351 61149 81211 68615 51449 29638 49184 51210 58743 58216 51610 56139 73604 60362 68833 68000 70473 60081 57989 61802 77365 65138 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36604000 22018 1633 20622 41502 33352 33352 1 9606 Homo sapiens -0.020104186815842695 QTFGYGAR Unmodified 898.42972 0.42971539 3356 O95433;G3V438;H0YJU2 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 5.33 3.09 1 1 1 38.16 38.176 2 0.0014282 9250 20230619_1880_Aki_TMTPro18x_K_F1 142.79 112.37 540010 395160 463350 510940 571690 609940 562520 576050 717490 559210 594610 525630 605930 458210 501220 650800 662770 490190 498410 362890 478950 507700 585270 608470 572390 590260 716860 565370 615730 533400 612930 485090 521200 641510 631380 467920 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 712530000 22019 3356 20623 41503;41504;41505 33353;33354;33355;33356 33353 4 9606 Homo sapiens -0.023562279679026688 QTFQVTDCR Unmodified 1153.5186 0.51860675 2953 F2Z2U4;H0Y4W2;Q9Y4A5-2;Q9Y4A5;Q59FH1;A0A994J575 TRRAP Transformation/transcription domain-associated protein yes no 0 0 0 5 0 1 39.872 39.962 2 0.043472 9500 20230619_1885_Aki_TMTPro18x_K_F5 65.305 43.799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22020 2953 20624 41506 33357 33357 1 9606 Homo sapiens -0.05201180790550097 QTFSPFGQIMEIR Oxidation (M) 1568.7657 0.76571331 2070;2994 O15187;Q2TSD2;A8K5C4;Q01085;Q01085-2;B4DHS3;Q59G49;Q49AS9;F8WE16;F8W8I6;Q59G98;P31483;C9JTN7;P31483-2 TIAL1;TIA1 Nucleolysin TIAR;Nucleolysin TIA-1 isoform p40 no no 0 1 0 1 0 1 59.029 59.029 3 4.6108E-06 18087 20230619_1880_Aki_TMTPro18x_K_F1 122.1 109.54 30394 25712 25786 33454 32667 35645 34136 31295 34076 35175 34888 34982 36148 31426 34681 37022 37779 35187 28075 23600 26729 33159 33427 35778 34322 32390 34769 35337 35820 35401 36790 32825 35475 37008 36098 33450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123890000 22021 2070;2994 20625 41507 33358 33358 1297 1 9606 Homo sapiens 0.0040810863752085424 QTFSPFGQIMEIR Unmodified 1552.7708 0.77079869 2070;2994 O15187;Q2TSD2;A8K5C4;Q01085;Q01085-2;B4DHS3;Q59G49;Q49AS9;F8WE16;F8W8I6;Q59G98;P31483;C9JTN7;P31483-2 TIAL1;TIA1 Nucleolysin TIAR;Nucleolysin TIA-1 isoform p40 no no 0 0 0 2.5 0.5 1 1 62.696 62.715 2 2.093E-11 19837 20230619_1881_Aki_TMTPro18x_K_F2 224.25 185.68 85414 76063 83537 91755 75344 104810 97891 97887 102230 102320 97625 97907 112550 88900 102180 117340 113700 112710 79009 69749 84979 91543 79674 104780 97540 100590 103750 103030 101050 99322 113870 93538 104800 117150 108670 107110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 241220000 22022 2070;2994 20625 41508;41509 33359 33359 1 9606 Homo sapiens 0.016524125001524226 QTGEGVGPQEYTLLK Unmodified 1618.8203 0.82025131 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;Q9H8E3;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRU9 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 54.397 54.474 3 0.0043472 15582 20230619_1885_Aki_TMTPro18x_K_F5 68.413 55.276 83912 56270 82496 90591 67366 84505 77783 73978 83425 106760 94160 107920 119310 92554 89390 123550 117210 126520 77493 51827 83744 88528 71533 85615 78045 77225 85253 106140 97275 108940 119510 97670 93150 123710 111950 120100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 437730000 22023 1603 20626 41510;41511 33360;33361 33360 2 9606 Homo sapiens 0.03559398989955298 QTGIVLNRPVLR Unmodified 1364.8252 0.82521752 3850 Q13435;E9PPJ0;Q7Z3K9;E9PJ04;H0YCG1;E9PJT3 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 1 6 0.816 1 1 1 43.255 43.34 3 6.0893E-07 10901 20230619_1886_Aki_TMTPro18x_K_F6 167.18 127.87 333060 264990 291540 360970 319210 339240 359480 366840 398670 359580 372060 326060 380310 295580 330910 388750 349570 338250 307600 243400 300450 356260 330460 345290 361330 372700 402780 362790 383000 331780 385350 310930 338710 386180 334210 321850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 676190000 22024 3850 20627 41512;41513;41514 33362;33363 33362 2 9606 Homo sapiens 0.15739792433873845 QTHGILEYYCR Unmodified 1438.6663 0.66633362 2396 B3KRK2;Q53HI2;Q9UJV9;H0Y8L8;A0A499FJW5 DDX41 Probable ATP-dependent RNA helicase DDX41 yes no 0 0 0 8 0 1 43.084 43.094 3 1.5323E-06 10740 20230619_1888_Aki_TMTPro18x_K_F8 137.4 118.62 32582 20913 29930 28878 28234 28004 34225 36470 37873 44666 40844 42465 46285 36602 37108 44023 43912 47164 30067 19230 30590 28510 29603 28581 34287 36876 38538 44608 42008 42994 46614 38365 38309 44275 41971 44751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24030000 22025 2396 20628 41515 33364 33364 1 9606 Homo sapiens -0.03545289256544493 QTHNNAVVK Unmodified 1009.5305 0.53049207 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;B3KRA9 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 7.5 0.5 1 1 50.96 51.038 3 0.028822 14028 20230619_1887_Aki_TMTPro18x_K_F7 58.676 19.654 185530 2568100 295310 214100 192050 956120 281680 263920 194300 297810 183530 178850 149240 152660 857740 184000 772880 267120 189450 2325800 289800 425820 215480 899550 276300 317760 203040 296000 188830 185810 187490 160180 851020 191150 736810 254690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3361299999.9999995 22026 43 20629 41516;41517 33365 33365 1 9606 Homo sapiens 0.026108040149551925 QTHVAPAAPEAR Unmodified 1246.6418 0.64183343 2946 F1D8P4;P51843-2;P51843 NR0B1 Nuclear receptor subfamily 0 group B member 1 yes no 0 0 0 4 0 1 28.291 28.364 3 0.00014147 5017 20230619_1883_Aki_TMTPro18x_K_F4 105.65 78.979 3504.9 2522.4 4045.2 3287.3 5581.3 5882.2 5620 7365.3 8801.6 5162 5911.1 5786.2 6477.1 5932.1 3551.4 5144.1 7742.8 5005.3 3242.6 2316.8 4083.7 3294.5 5678.8 5783 5761.9 7351.9 8659 5359.9 6218.9 5852.4 6462.2 6069.9 3901.3 5171.3 7348.8 4765.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9092300 22027 2946 20630 41518 33366 33366 1 9606 Homo sapiens 0.028378186522104443 QTIAHQQQQLTNLQMAAQR Unmodified 2207.1229 0.12293246 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;A0A0J9YVR6;E9PN18;E9PMU7 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 0 0 3 0 1 43.83 43.899 3 6.9336E-32 11314 20230619_1882_Aki_TMTPro18x_K_F3 239.75 212.91 40508 39388 48675 44616 40831 47079 44226 41429 50546 54564 54504 56421 58215 51245 50607 51709 55602 53443 37563 36086 48622 44681 43122 47302 44617 43081 51325 54500 55906 56986 58944 53051 51874 52060 53136 50750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161930000 22028 1044 20631 41519 33367 33367 1 9606 Homo sapiens 0.06765591386738379 QTIDNSQGAYQEAFDISK Unmodified 2013.928 0.92796385 3511 P27348;B4DMT8;Q53S41;B4DY04 YWHAQ 14-3-3 protein theta yes no 0 0 0 4.57 0.904 1 2 3 1 56.485 56.526 2;3;4 1.4501E-48 16992 20230619_1882_Aki_TMTPro18x_K_F3 211.74 196.15 260500 192140 238120 274140 224340 287530 263240 260990 314890 335870 322730 365860 395600 337580 290570 443910 412160 491580 240560 176630 243810 270150 235590 288970 264800 270520 318410 336370 334120 369110 396590 354860 304900 446510 393730 466100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2980599999.9999995 22029 3511 20632 41520;41521;41522;41523;41524;41525;41526 33368;33369;33370;33371;33372 33368 5 9606 Homo sapiens -0.03844300937271328 QTIDNSQGAYQEAFDISKK Unmodified 2142.0229 0.022926872 3511 P27348;B4DMT8;Q53S41;B4DY04 YWHAQ 14-3-3 protein theta yes no 0 0 1 5.67 0.471 1 2 53.591 53.665 3;4 1.8807999999999997E-19 15447 20230619_1886_Aki_TMTPro18x_K_F6 179.87 163.45 421640 333660 378150 378790 333230 391390 376010 400490 352140 509480 521110 465010 503670 394140 441760 501170 466360 404930 389460 305920 387070 379180 351010 395090 376310 411310 367450 507290 525530 471800 511300 414610 451970 496420 445540 385850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4525000000 22030 3511 20633 41527;41528;41529 33373;33374 33374 2 9606 Homo sapiens -0.002403674660854449 QTIGLALQGK Unmodified 1027.6026 0.60259438 1766 B4DKX3;A0A8I5KSH6;Q13206;A0A8I5KQZ1;A0A3B3ISR7;Q86VR6;E9PIF2;Q59EC7;A0A8I5KXY1;A0A8I5KPM1;A0A8I5KUU7 DDX10 Probable ATP-dependent RNA helicase DDX10 yes no 0 0 0 2.5 0.5 1 1 51.921 51.973 3 0.0019416 15324 20230619_1881_Aki_TMTPro18x_K_F2 85.963 68.144 43438 35943 46008 46796 45886 51048 44118 48073 55703 53204 59355 54373 61465 45831 50927 67877 63599 60522 40189 32994 46520 46422 47639 51226 44976 49446 56236 53534 60769 54910 62131 48742 52764 67389 60707 57573 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80392000 22031 1766 20634 41530;41531 33375 33375 1 9606 Homo sapiens 0.0898971836866167 QTIGNSCGTIGLIHAVANNQDK Unmodified 2310.1386 0.13864211 3423 V9HW74;P09936;D6RE83;B2RD14;D6R956;D6R974;A6NLJ7 HEL-117;UCHL1 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes no 0 0 0 1.5 0.5 2 2 52.525 52.541 3;4 3.2078E-38 15346 20230619_1880_Aki_TMTPro18x_K_F1 238.87 228.53 166260 141270 172100 181390 153790 204040 171730 174770 162730 183220 176650 194830 186790 165620 178950 204810 208850 239500 153820 129650 174150 180150 161880 203830 171950 180820 166990 185020 181200 196240 190020 173900 183910 207030 199750 227000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 8662700000 22032 3423 20635 41532;41533;41534;41535 33376;33377;33378 33376 3 9606 Homo sapiens 0.03597833113190063 QTIQYIHPADAVK Unmodified 1482.7831 0.78307794 4491;3802 Q05CW7;Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 no no 0 0 0 7.5 0.5 1 1 45.549 45.611 3 1.8334E-05 11739 20230619_1888_Aki_TMTPro18x_K_F8 121.92 95.775 143750 105120 132330 140770 147170 161870 163260 153980 199490 169250 161740 168220 188470 146510 154760 200100 185730 160550 132740 96574 135660 139490 152190 161880 164730 158270 199640 170270 168910 170120 189860 154680 159920 197890 177230 153000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 267450000 22033 3802;4491 20636 41536;41537 33379 33379 1 9606 Homo sapiens 0.06099772234847478 QTLAAFVPLLLK Unmodified 1312.8119 0.81185887 2356 B4E0B7;B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 7 0 1 65.577 65.601 3 0.0019231 20339 20230619_1887_Aki_TMTPro18x_K_F7 86.772 77.558 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22034 2356 20637 41538 33380 33380 1 9606 Homo sapiens 0.16796541601934223 QTLEILK Unmodified 843.50657 0.50656873 2835 Q6FH24;D3DWY7;P61758-2;P61758 VBP1 Prefoldin subunit 3 yes no 0 0 0 7 0.816 1 1 1 52.425 52.501 2 0.013635 14687 20230619_1887_Aki_TMTPro18x_K_F7 121.31 0 266060 210930 237200 248480 232100 268340 266900 257050 302370 227090 223960 182900 207180 149160 242570 242140 251180 195990 245750 193460 243360 248160 242610 269580 268150 262610 302670 229890 232570 186800 213550 160000 246490 239250 239860 186840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 350880000 22035 2835 20638 41539;41540;41541 33381 33381 1 9606 Homo sapiens 0.07855570528579392 QTLELAR Unmodified 829.46577 0.46576654 187 A0A024R258;B3KNI8;B3KNI2;Q9UMX0-2;Q9UMX0;Q59FJ2 UBQLN1 Ubiquilin-1 yes no 0 0 0 4.5 0.5 1 1 40.026 40.092 2 0.05841 9547 20230619_1885_Aki_TMTPro18x_K_F5 82.426 0 529560 351550 530790 517830 672520 653370 602080 657790 711710 608040 652780 647450 580880 448380 616580 529610 626280 497230 489100 323450 541020 511000 684860 650490 614690 670040 716300 618320 669440 648560 596520 473480 626350 529480 598230 473090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 265320000 22036 187 20639 41542;41543 33382 33382 1 9606 Homo sapiens 0.044212292089468974 QTLLFSATQTK Unmodified 1236.6714 0.67140222 1766 B4DKX3;A0A8I5KSH6;Q13206;A0A8I5KQZ1;A0A3B3ISR7;Q86VR6;E9PIF2;Q59EC7;A0A8I5KXY1;A0A8I5KPM1;A0A8I5KUU7 DDX10 Probable ATP-dependent RNA helicase DDX10 yes no 0 0 0 3 0 1 54.09 54.143 2 0.005723 15991 20230619_1882_Aki_TMTPro18x_K_F3 85.813 40.676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22037 1766 20640 41544 33383 33383 1 9606 Homo sapiens 0.06253337877683407 QTLMWSATWPK Oxidation (M) 1363.6595 0.65945733 1328;3137 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7;P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3KRZ1;J3QSF1 DDX17;DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 no no 0 1 0 3.5 0.5 1 1 59.259 59.261 3 7.7543E-05 18013 20230619_1883_Aki_TMTPro18x_K_F4 119.74 106.54 195540 172500 195890 193710 205820 205500 214800 212350 221920 217680 212000 199620 220260 179110 202980 244570 220470 201010 180900 158080 199070 194140 213040 207180 216320 216600 225360 219140 218280 202900 223680 188880 207900 242170 210640 191460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 249440000 22038 1328;3137 20641 41545;41546 33384;33385;33386 33385 840 3 9606 Homo sapiens -0.007826021371329261 QTLMWSATWPK Unmodified 1347.6645 0.66454271 1328;3137 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7;P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3KRZ1;J3QSF1 DDX17;DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 no no 0 0 0 5 0 1 61.829 61.877 2 9.6382E-05 18717 20230619_1885_Aki_TMTPro18x_K_F5 159.83 134.39 202450 198460 223010 220370 180860 244060 233820 215950 263020 272290 214690 221170 276310 225980 225190 266500 267430 256470 187590 181790 224250 221140 192920 244320 233590 224090 264600 270670 225280 226930 277620 235190 232430 266490 255390 243740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 198070000 22039 1328;3137 20641 41547 33387;33388 33387 2 9606 Homo sapiens 0.004617017254759048 QTLPVIYVK Unmodified 1059.6328 0.63283187 2663 P49841-2;P49841;B5BUC0;Q6FI27;A0A7I2YQK0;A0A3B3ITW1;A0A7I2V5M2;A0A7I2V3J4;A0A7I2V2V4;A0A7I2V4W7 GSK3B Glycogen synthase kinase-3 beta yes no 0 0 0 3 0 1 56.58 56.616 3 0.0010796 17023 20230619_1882_Aki_TMTPro18x_K_F3 96.342 64.211 31075 25753 28314 31659 25881 29880 30367 30238 33540 37569 34244 35772 38889 34182 33639 46695 42058 41774 28715 23626 28976 31465 27214 30359 30466 31068 34049 37515 35315 36354 39312 35964 34836 46407 40158 39730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40449000 22040 2663 20642 41548 33389 33389 1 9606 Homo sapiens 0.10540077033851958 QTLQEDLLR Unmodified 1114.5982 0.59823728 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;V9H023;V9H0D5;B4DL39;B4DSB9;Q0ZAJ1 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 3.5 0.5 1 1 49.008 49.085 2 1.8847E-05 13725 20230619_1882_Aki_TMTPro18x_K_F3 168.83 105.26 173230 146740 156690 171920 161360 184230 156370 164780 208710 207640 192350 202700 226550 161910 183390 214730 219210 203690 160090 134550 160690 171720 167290 184940 159630 170820 209140 207410 199640 204550 227900 171290 189380 214230 209290 193640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357190000 22041 3585 20643 41549;41550 33390;33391 33390 2 9606 Homo sapiens 0.04552209155099263 QTLQSEQPLQVAR Unmodified 1496.7947 0.79470526 1235 C9JX88;A0A140VK70;P35998;Q75L23;C9JLS9;B7Z571 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 5.5 0.5 1 1 43.55 43.636 2 5.5653999999999994E-21 11067 20230619_1885_Aki_TMTPro18x_K_F5 231.05 204.67 91640 73939 92400 109870 92161 116890 113820 107250 127160 119330 128280 120730 139720 100550 100110 148840 133570 132040 84735 67980 93935 108030 96445 117370 113900 110590 128810 120010 131960 121910 140260 107000 104610 147700 127460 125590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 214440000 22042 1235 20644 41551;41552 33392;33393 33392 2 9606 Homo sapiens 0.06617969258172707 QTLSTPGTIILGTIPVPK Unmodified 1835.0768 0.076800343 4063 Q5TDE9;Q9BSD7;Q5TDF0 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase yes no 0 0 0 4.5 0.5 1 1 63.318 63.344 3 1.9411E-06 19451 20230619_1885_Aki_TMTPro18x_K_F5 101.05 87.637 89582 75809 79022 96894 93604 95318 102190 93231 111790 101040 104710 96189 104960 88756 98864 112170 99245 106320 82771 69569 81477 96073 96262 96481 102800 95643 113040 101580 107730 97675 106820 93040 100740 111980 95002 101020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 249500000 22043 4063 20645 41553;41554 33394;33395 33395 2 9606 Homo sapiens 0.19266501494234944 QTMLFSATQTR Oxidation (M) 1298.6289 0.62888548 4606 Q9NVP1;Q4ZG72;Q8N254;H7C452;Q59FR7 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 1 0 1.5 0.5 1 1 43.014 43.055 2 0.00098166 11263 20230619_1881_Aki_TMTPro18x_K_F2 97.163 81.019 37446 30500 33646 35187 44017 49456 41684 39855 43090 38776 40272 37296 35908 30856 47351 39292 40729 36909 34595 27965 34662 35336 44849 48708 42201 41345 43703 39213 41270 37726 37328 32484 47537 39245 39007 35095 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60939000 22044 4606 20646 41555;41556 33396 33396 2828 1 9606 Homo sapiens -0.008483805221885632 QTMQVDEHAR Oxidation (M) 1229.5459 0.54588413 2292 B2RB23;P42765;A0A0B4J2A4;B3KNP8;K7EME0 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes no 0 1 0 2 0 1 25.671 25.748 3 0.0060041 4350 20230619_1881_Aki_TMTPro18x_K_F2 69.979 56.073 0 0 0 0 0 1346.3 0 0 1322.3 0 1138.6 0 0 0 0 0 1428.1 0 0 0 0 0 0 1224.2 0 0 1256.2 0 1117.5 0 0 0 0 0 1342.7 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 526060 22045 2292 20647 41557 33397 33397 1419 1 9606 Homo sapiens -0.059706972501771816 QTNFMTK Unmodified 868.41129 0.41128813 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 0 2 0 1 44.51 44.593 2 0.024432 11961 20230619_1881_Aki_TMTPro18x_K_F2 89.401 60.09 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22046 1102 20648 41558 33398 33398 1 9606 Homo sapiens -0.028181059341250148 QTNPSAMEVEEDDPVPEIR Oxidation (M) 2170.9688 0.96884239 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;Q96IF9;Q0IIN5;Q9NTC4 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 1 0 1 0 1 50.056 50.056 3 1.425E-19 14285 20230619_1880_Aki_TMTPro18x_K_F1 174.7 160.23 16557 13468 18227 19224 16850 19496 22408 19345 23703 22076 20095 21241 23666 18600 15947 25476 24099 24370 15322 12376 18367 18940 17758 19683 22302 19857 23933 22143 20944 21514 23674 19645 16854 25398 22981 23158 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51279000 22047 3656 20649 41559 33399 33399 2362 1 9606 Homo sapiens -0.0698032767991208 QTNPSAMEVEEDDPVPEIR Unmodified 2154.9739 0.97392777 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;Q96IF9;Q0IIN5;Q9NTC4 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 1 0 1 53.234 53.234 3 9.4055E-25 15654 20230619_1880_Aki_TMTPro18x_K_F1 204.51 194.59 28346 22713 27018 26593 27389 35032 35778 32574 38722 41550 39561 38112 40726 32921 33132 38129 38889 47547 26198 20829 27573 26655 28682 34718 35667 33681 39332 41404 40585 38659 41157 34437 34173 38741 37213 45029 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 502990000 22048 3656 20649 41560 33400;33401 33400 2 9606 Homo sapiens -0.05736023817325986 QTPAGPETEEEPYR Unmodified 1602.7162 0.71618016 3854 Q13505-3;Q13505;Q13505-2 MTX1 Metaxin-1 yes no 0 0 0 1 0 1 38.889 38.889 2 1.2582999999999999E-21 9585 20230619_1880_Aki_TMTPro18x_K_F1 225.97 210.39 22173 15783 15525 24292 25994 24088 27748 28716 31352 24668 33141 31790 32970 26450 26031 36128 38648 34531 20435 14525 16535 23811 26200 24478 27973 28909 31772 25367 33892 31804 33328 27970 27343 36029 36828 32829 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46604000 22049 3854 20650 41561 33402 33402 1 9606 Homo sapiens -0.06106927837549847 QTPAGPETEEEPYRR Unmodified 1758.8173 0.81729119 3854 Q13505-3;Q13505;Q13505-2 MTX1 Metaxin-1 yes no 0 0 1 2 0 1 34.484 34.541 3 1.016E-07 7517 20230619_1881_Aki_TMTPro18x_K_F2 132.24 114.75 6644.4 8507.9 6709.8 8836 10644 12654 10373 11619 11290 10207 15257 14392 12956 12337 12544 12593 16198 15307 6166 7782.8 6885.9 8946.1 10743 12481 10504 11898 11595 10519 15359 14359 13287 12802 12964 12803 15457 14513 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32618000 22050 3854 20651 41562 33403 33403 1 9606 Homo sapiens -0.03176476134854056 QTPAPAASVTGSR Unmodified 1241.6364 0.6364137 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 7.67 0.471 1 2 35.141 35.171 2 3.6598E-05 7536 20230619_1888_Aki_TMTPro18x_K_F8 126.12 94.184 13112 11410 11995 10779 8969.6 11791 13298 12094 14846 14024 17606 12385 17650 10812 9105.4 11464 15049 9512.7 12121 10441 12229 10964 9690.2 11857 13207 12387 15134 14021 17885 12607 17578 11258 9747.6 11397 14303 9076.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33485000 22051 3588 20652 41563;41564;41565 33404;33405 33405 2 9606 Homo sapiens 0.025260950697429507 QTPHSEIIFYK Unmodified 1361.698 0.69795133 2095 A8K6T5;Q9UBL3-3;Q9UBL3;F5H8F7;B4DPT1;H0YBF6;B4DEM3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes no 0 0 0 7.5 0.5 1 1 47.785 47.858 3 8.773E-05 12634 20230619_1888_Aki_TMTPro18x_K_F8 120.87 85.865 110560 91861 111030 117520 99786 108450 121520 123160 117400 124910 137530 123200 127520 112580 135870 140220 132160 138940 102240 84306 112620 116470 105060 110690 121200 124860 120650 126040 139670 124880 130870 117920 137840 140380 126530 131960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209870000 22052 2095 20653 41566;41567 33406 33406 1 9606 Homo sapiens 0.0315702676903129 QTPMASSPR Unmodified 973.46511 0.46511462 4054 Q5SSJ5;Q5SSJ5-2;B0QZK4;Q5SWC8 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 6.5 0.5 1 1 31.574 31.64 2 0.00051347 5967 20230619_1887_Aki_TMTPro18x_K_F7 133.13 84.573 18876 11162 23858 22393 29476 38937 29565 35821 36355 19225 28789 29754 25679 28276 27460 14621 31161 28481 17462 10320 23909 21890 30220 37996 30022 36334 36276 20671 29769 29668 26440 28479 28021 15738 29760 26914 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 10599000 22053 4054 20654 41568;41569 33407 33407 1 9606 Homo sapiens -0.022679335024122338 QTPMASSPRPK Unmodified 1198.6128 0.61284149 4054 Q5SSJ5;Q5SSJ5-2;B0QZK4;Q5SWC8 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 1 2.5 0.5 1 1 34.324 34.383 3 3.214E-06 7325 20230619_1882_Aki_TMTPro18x_K_F3 142.51 99.72 64544 56721 63888 59602 82057 76694 80055 77399 99254 68239 74647 68292 68425 60614 69360 74136 98493 75900 59705 51949 65191 60227 83656 76329 81392 78761 98948 69518 77436 69114 70147 63489 72136 74369 93799 72154 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105380000 22054 4054 20655 41570;41571 33408 33408 1 9606 Homo sapiens 0.021479580315826752 QTPNDLTGEHSCIMLK Unmodified 1842.8604 0.86041834 4491 Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 yes no 0 0 0 6 0 1 48.54 48.619 3 3.8959E-15 13271 20230619_1886_Aki_TMTPro18x_K_F6 190.24 168.71 57946 50555 54526 53591 49944 53921 58514 52110 58161 68230 54357 53722 69865 53461 64925 70423 58857 63369 53577 46307 55597 53911 52455 54493 58493 53807 59214 67641 56643 55186 70529 56087 65803 70087 56404 60247 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94142000 22055 4491 20656 41572 33409 33409 1 9606 Homo sapiens -0.027297456734459047 QTPPPVSATSGTFR Unmodified 1444.731 0.73104237 2817 H0YLF2;E5RGZ2;H0YKJ1;D3DSU2;Q6NT76-4;Q6NT76-2;Q6NT76-3;Q6NT76;Q6NT76-5 HMBOX1 Homeobox-containing protein 1 yes no 0 0 0 4.5 3.5 1 1 42.213 42.214 2 0.0011912 11059 20230619_1880_Aki_TMTPro18x_K_F1 92.247 62.899 25105 22515 27003 28698 20036 23354 24965 23023 28585 25358 33027 34674 29599 30950 25713 33801 38527 37882 23242 20657 27177 28404 21502 24014 25012 23634 29064 25795 33531 34659 30185 32171 26966 34126 36734 35940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 25643000 22056 2817 20657 41573;41574 33410;33411 33410 2 9606 Homo sapiens 0.026466088210554517 QTQAIPYTGPFNLLCYQLQK Unmodified 2382.2042 0.20420248 3987 Q53F02;Q9UKF6;G5E9W3;B4DQR2;Q05BZ5 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes no 0 0 0 5.5 0.5 1 1 64.139 64.184 3 7.9022E-08 19989 20230619_1886_Aki_TMTPro18x_K_F6 105.5 87.444 24046 20331 25948 28126 22599 25223 25327 26961 21437 30676 32316 25428 32398 25042 27140 29400 31364 33679 22254 18673 26162 27722 23794 25761 25287 27522 22529 30620 32599 26062 32791 26102 27937 29706 29984 31934 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114410000 22057 3987 20658 41575;41576 33412 33412 1 9606 Homo sapiens 0.06838854306124631 QTQTFTTYSDNQPGVLIQVYEGER Unmodified 2773.3195 0.31950282 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;P11142-2;Q53HF2;B4E1Q1;A8K7Q2;Q96BE0;E9PS65 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 0 0 5.5 0.5 1 1 61.497 61.549 3 2.1764E-53 18784 20230619_1886_Aki_TMTPro18x_K_F6 253.13 241.24 214120 156060 194360 224900 173980 169430 214130 194480 189650 218240 254550 219640 230630 193530 219900 296420 262510 252640 197700 143490 198930 220690 183160 176140 212900 197760 197200 219220 256860 222360 235640 205880 226580 293520 250680 240460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2085599999.9999998 22058 3430 20659 41577;41578 33413;33414 33414 2 9606 Homo sapiens 0.0037758518014925357 QTQTSEVYDGPK Unmodified 1351.6256 0.62557424 1588 Q15154;Q15154-5;H0YBA1;D3DSQ0;A0A5H1ZRS1;B9EIS5;A2RUU9;Q15154-2;Q15154-4;A0A4W8VX11;A0A088AWL4;B4DJ00;B4DWY1 PCM1 Pericentriolar material 1 protein yes no 0 0 0 3 0 1 41.321 41.38 3 0.00088703 10213 20230619_1882_Aki_TMTPro18x_K_F3 89.629 74.364 43185 34831 39043 45481 49809 57264 42401 47293 80001 46876 56652 60001 59539 52019 47961 50070 71351 65142 39897 31977 40204 45188 50796 56769 44329 48984 78328 47884 59341 60030 60170 53829 50270 51189 67999 61735 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66968000 22059 1588 20660 41579 33415 33415 1 9606 Homo sapiens -0.0361735209521612 QTQVSVLPEGGETPLFK Unmodified 1828.9571 0.95707914 2798 CON__Q3SX14;P06396-3;A0A384MEF1;A0A0A0MT01;B7Z6N2;A0A8V8TND7;B7Z9A0;A0A0A0MS51;B7Z992;B7Z2X4;B7Z4U6;P06396-4;P06396-2;P06396 GSN Gelsolin yes no 0 0 0 6 0 1 60.472 60.53 3 0.00034764 18366 20230619_1886_Aki_TMTPro18x_K_F6 75.564 62.797 + 16594 14568 16656 17329 20422 22706 22770 23308 27270 20260 21444 24792 19698 20367 22216 22926 23116 26362 15351 13358 16979 17348 20982 22564 22952 23682 27270 20786 22229 24805 20308 21275 22601 23188 22131 24990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70141000 22060 2798 20661 41580 33416 33416 1 9606 Homo sapiens 0.07575888149631282 QTSDGNWLMVHR Oxidation (M) 1458.6674 0.66739625 561 O75131;A0A024R994;Q05DL8;A0A087WYQ3 CPNE3 Copine-3 yes no 0 1 0 7 0 1 41.769 41.84 3 3.4021E-10 9998 20230619_1887_Aki_TMTPro18x_K_F7 185.37 159.39 29631 28704 29170 31402 32841 36139 36773 35210 41873 27993 33439 35987 39794 30976 30541 36266 39029 34975 27427 26290 29743 31563 33929 36171 36995 35851 41986 28946 34994 36014 39965 32401 31716 36273 37232 33248 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45249000 22061 561 20662 41581 33417 33417 329 1 9606 Homo sapiens -0.043590748877022634 QTSGGPVDASSEYQQELER Unmodified 2079.9345 0.93450579 3476 Q6IB54;P18859;P18859-2;Q6NZ59;A8MUH2 ATP5J ATP synthase-coupling factor 6, mitochondrial yes no 0 0 0 1 0 1 46.194 46.194 3 2.174E-60 12811 20230619_1880_Aki_TMTPro18x_K_F1 264.01 244.46 10962 8575.8 7939.9 12403 10944 13739 12241 11132 15830 10800 13406 13223 14624 9053.2 14817 10936 13874 13107 10111 7883.1 8393 12214 11191 13723 12367 11552 15807 11016 13923 13172 14871 9593.1 14989 11093 13278 12428 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50295000 22062 3476 20663 41582 33418 33418 1 9606 Homo sapiens -0.06226407776512133 QTSGMEYK Oxidation (M) 958.4066 0.40659669 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;P27824-3;D6RGY2;A0A7P0Z484 CANX Calnexin yes no 0 1 0 4 0 1 34.806 34.856 2 0.024544 7464 20230619_1883_Aki_TMTPro18x_K_F4 78.098 53.466 24996 15745 32404 30045 53565 42197 39967 50354 34217 27658 45647 61515 38222 42494 45493 19747 61652 53103 23137 14541 32585 29320 53422 41942 40947 50239 35609 30165 46102 60180 39671 43235 46871 22169 58773 50115 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16708000 22063 1700 20664 41583 33419 33419 1106 1 9606 Homo sapiens -0.0742703486754408 QTSGMEYK Unmodified 942.41168 0.41168206 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;P27824-3;D6RGY2;A0A7P0Z484 CANX Calnexin yes no 0 0 0 5 0 1 39.487 39.577 2 0.0015341 9339 20230619_1885_Aki_TMTPro18x_K_F5 116.3 82.227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22064 1700 20664 41584 33420 33420 1 9606 Homo sapiens -0.06182731004935249 QTSLTPR Unmodified 801.43447 0.43446642 364 Q9H072;A0A024R5X7;O76031;H0YM48 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes no 0 0 0 6.5 0.5 1 1 32.512 32.577 2 0.06399 6358 20230619_1887_Aki_TMTPro18x_K_F7 79.906 32.839 12093 6615.5 15032 14169 25425 27093 18040 21170 23819 11995 18193 19820 14437 17034 17146 8830.8 23131 14092 11181 6125.7 15175 13840 25383 26261 18797 21774 23672 12878 18782 19658 15025 17208 17666 9335.2 22011 13362 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20280000 22065 364 20665 41585;41586 33421 33421 1 9606 Homo sapiens 0.025806561748481727 QTSLVSSR Unmodified 876.46649 0.46649483 3859 Q6I9S2;Q13573;G3V3A4;B4DEG7;Q6P151;Q0D2M5;G3V5R3 SNW1 SNW domain-containing protein 1 yes no 0 0 0 7.5 0.5 1 1 33.413 33.452 2 0.0062683 6675 20230619_1887_Aki_TMTPro18x_K_F7 111.06 22.691 52500 31919 68069 55817 85977 97339 67772 82487 77972 47959 66603 62657 57157 53874 67546 30408 67505 52223 48587 29446 68044 54927 87391 94869 69758 84293 78299 50817 68454 62632 59162 54622 68283 32294 64483 49427 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36309000 22066 3859 20666 41587;41588 33422;33423 33422 2 9606 Homo sapiens 0.023320238580026853 QTSSTPSSLALTSASR Unmodified 1592.8006 0.8005785 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B4DL23 CEP170 Centrosomal protein of 170 kDa yes no 0 0 0 4.5 3.5 1 1 42.244 42.245 2 7.982899999999999E-19 11070 20230619_1880_Aki_TMTPro18x_K_F1 239.75 213.15 41328 27637 31377 34706 32889 41585 37034 35779 41315 38781 50354 46661 46014 38341 46621 52834 51632 50647 38095 25382 32751 34552 34225 41381 37239 37041 42177 39279 51028 46776 47124 40583 47708 52719 49345 48132 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65118000 22067 1960 20667 41589;41590 33424;33425 33424 2 9606 Homo sapiens 0.02789022979186484 QTTITSHFAK Unmodified 1132.5877 0.58767259 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;A0A7I2V311;A0A7I2V5F6;A0A7I2V2G5;K7ENQ6;K7EJL0;K7ERQ1;K7ELB1 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 2 0 1 40.94 41.013 3 0.00051314 10255 20230619_1881_Aki_TMTPro18x_K_F2 88.338 61.223 392280 383690 318060 339210 440200 479610 407750 430140 752850 494930 431990 345740 516330 436110 374990 437290 384600 312710 362610 350810 331230 348360 447570 473510 423270 444220 734100 493060 461110 361010 517640 446920 384650 432420 367400 298600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125250000 22068 442 20668 41591 33426 33426 1 9606 Homo sapiens 0.026682265006456873 QTTQDAPEEVR Unmodified 1272.5946 0.59460847 4636 Q9P013;A0A024R3B4;A0A024R3C8 CWC15;HSPC148 Spliceosome-associated protein CWC15 homolog yes no 0 0 0 1 0 1 32.566 32.566 2 1.8734000000000002E-30 6988 20230619_1880_Aki_TMTPro18x_K_F1 277.76 241.26 36047 16336 44598 46617 55178 71521 46391 53900 58842 38426 63665 73877 65914 55323 61722 27523 71700 60333 33304 15231 44774 44834 56324 69925 47702 55855 59338 40781 65260 72679 66993 56234 63184 30069 68427 56998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84681000 22069 4636 20669 41592 33427 33427 1 9606 Homo sapiens -0.03078505409439458 QTTVSNSQQAYQEAFEISK Unmodified 2158.0178 0.017841494 3535 V9HWD6;P31946-2;P31946;B5BU24 HEL-S-1;YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 0 0 6 0.816 1 1 1 55.443 55.51 3 3.5791E-31 16218 20230619_1886_Aki_TMTPro18x_K_F6 226.44 224.22 282570 216750 268480 288780 238450 295590 293040 298180 311870 364960 359100 408170 433070 345910 358610 460610 398700 460340 261070 199070 273620 285780 251790 298340 293020 306250 318860 366430 369760 410250 435950 365010 368770 460680 381520 437010 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1359800000 22070 3535 20670 41593;41594;41595 33428;33429;33430;33431 33430 4 9606 Homo sapiens -0.014846713286715385 QTVADQVLVGSYCVFSNQGGLVHPK Unmodified 2702.3486 0.34863488 3667 P56537;P56537-2 EIF6 Eukaryotic translation initiation factor 6 yes no 0 0 0 3 0 1 62.002 62.031 3 0.00070134 19259 20230619_1882_Aki_TMTPro18x_K_F3 71.091 61.303 30638 26485 24969 26640 24485 28554 26469 24044 28133 29329 31881 34145 33814 27264 25232 31711 33627 31347 28297 24249 25838 26928 25551 28639 26630 25032 28724 29503 32623 34200 34036 28587 26306 31758 32077 29786 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143780000 22071 3667 20671 41596 33432 33432 1 9606 Homo sapiens 0.0655545099543815 QTVAVGVIK Unmodified 913.55967 0.55966693 1560;3997;1378 Q05639;A0A2U3TZH3;P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;B4DNE0;Q8IUB0;A0A4D5RA52;Q504Z0;Q53HR1;Q9NZS6;Q6P4C9;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q16577;Q6P082;A0A4D5RBD4;A0A4D5RBH1;A0A4D5RAB6;Q14222;A0A4D5RBL9;Q2F837;Q96EB3;A0A4D5RBE6;A0A4D5RA59;Q53GE9 EEF1A2;EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A Elongation factor 1-alpha 2;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 3.43 2.66 2 2 1 1 1 47.714 47.767 2;3 9.6216E-06 13408 20230619_1880_Aki_TMTPro18x_K_F1 174.41 99.027 3117700 2245600 2905000 3114600 3264800 3162000 3330600 3277500 3464500 4042000 4649500 4348800 4759500 3703500 4278600 3864600 4686500 4040100 2879000 2063900 2974700 3074200 3361000 3197300 3359900 3361100 3571200 4051700 4717300 4378700 4828100 3851800 4379000 3892900 4475600 3837800 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 35286000000 22072 1378;1560;3997 20672 41597;41598;41599;41600;41601;41602;41603 33433;33434;33435;33436;33437;33438 33433 6 9606 Homo sapiens 0.09942948311243072 QTVEHCQYRPPR Unmodified 1569.747 0.74704356 2891 E7EMW7;O95071-2;O95071 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 0 0 1 8 0 1 28.302 28.327 4 2.5389E-07 5056 20230619_1888_Aki_TMTPro18x_K_F8 166.14 140.02 18156 11418 14593 16049 16001 16818 16593 17142 19612 17445 19161 14792 16825 13409 13744 17657 20776 17985 16737 10502 15148 15834 16531 16954 16792 17495 19782 17537 19543 15109 17101 14110 14438 17680 19791 17089 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 10014000 22073 2891 20673 41604 33439;33440 33440 2 9606 Homo sapiens -0.015040082136920319 QTVLESIR Unmodified 944.5291 0.52909508 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q96T67;Q5T9A4;Q5T9A4-3;A0A5K1VW56;Q9H834;Q5T9A4-2 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B yes no 0 0 0 6.5 0.5 1 1 45.337 45.423 2 0.0068191 11490 20230619_1887_Aki_TMTPro18x_K_F7 120.87 38.628 132350 108330 111130 143590 137720 160050 164190 153910 176520 109530 103460 93023 106940 90516 127330 117940 118180 89373 122220 99462 115300 142260 141760 160390 164270 156510 176020 112700 109750 95211 110040 94875 128550 116530 112960 85295 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239000000 22074 4603 20674 41605;41606 33441 33441 1 9606 Homo sapiens 0.05461169926184084 QTVMFSATFPR Unmodified 1283.6332 0.63324258 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 4 0 1 55.157 55.169 2 1.0672E-05 16295 20230619_1883_Aki_TMTPro18x_K_F4 145.91 92.14 69818 54602 64748 67630 62380 79220 73989 78309 83953 67030 66147 65777 75913 59919 64617 71595 71626 65505 64502 50107 66193 67388 65395 79172 74244 79741 84216 68335 69128 66655 76611 62634 66327 71406 68421 62304 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24749000 22075 1002 20675 41607 33442 33442 1 9606 Homo sapiens 0.002771286913912263 QTVSLQEQNTTLQTQNAK Unmodified 2031.0233 0.023261223 2857 Q3V6T2;D6W5D1;Q3V6T2-2;A0A2U3TZV9;A0A2R8Y7B1;Q3V6T2-3;Q3V6T2-4;Q3V6T2-5;A0A2R8YG73;A0A2R8Y4X4;A0A2R8Y4W8;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y885;A0A2R8YDS8;A0A2R8Y7D4;H7C2C6;H0Y470;A0A2R8YGU1;Q9ULK8;H0Y7U8 CCDC88A;KIAA1212 Girdin yes no 0 0 0 6 0 1 45.511 45.597 3 8.0928E-11 11936 20230619_1886_Aki_TMTPro18x_K_F6 112.3 94.598 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22076 2857 20676 41608 33443 33443 1 9606 Homo sapiens 0.04899052253767877 QTYDDGAATR Unmodified 1096.4785 0.47851608 3006 Q6PJT7;Q6PJT7-5;G3V256;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-11;Q6PJT7-4;A0A3B3IT62;H0YJA2;G3V572;G3V3Y4;G3V3R9 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 0 0 0 1 0 1 30.762 30.762 2 0.062762 6312 20230619_1880_Aki_TMTPro18x_K_F1 63.624 42.723 6467.9 2696.3 8302.5 7245.9 8459.7 10582 6879.5 9928.5 9944.6 5648.5 9861.5 10354 8430.8 7345.3 11655 4550 11136 11758 5976.4 2512 8277.1 6980.7 8743.7 10417 7135.3 10064 9932.9 6085.3 10068 10192 8803.3 7535.9 11726 5043 10664 11089 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7856400 22077 3006 20677 41609 33444 33444 1 9606 Homo sapiens -0.06586404189488348 QTYFLPVIGLVDAEK Unmodified 1691.9134 0.91342341 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PM69;E9PKD5;E9PMD8;E9PLG2 PSMC3 26S protease regulatory subunit 6A yes no 0 0 0 5 3 1 1 65.026 65.046 3 1.0086E-07 19976 20230619_1888_Aki_TMTPro18x_K_F8 130.21 114.83 84338 75600 72985 86700 73162 89495 98889 84469 89149 104380 101670 104100 103990 86352 97226 126370 108670 102410 77945 69290 75199 86683 76717 90171 97883 87225 91937 104380 103860 105120 105730 91745 99779 124930 103820 97548 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123530000 22078 4761 20678 41610;41611 33445;33446;33447 33447 3 9606 Homo sapiens 0.09514323443181638 QTYSTEPNNLK Unmodified 1293.6201 0.62009493 3051 H0YKD8;P46779;P46779-2;P46779-3;Q59F34;H0YMF4;P46779-4;P46779-5;H0YLP6 RPL28 60S ribosomal protein L28 yes no 0 0 0 5.5 0.957 1 2 2 1 46.845 46.916 2;3 2.4823E-05 10226 20230619_1886_Aki_TMTPro18x_K_F6 118.28 94.529 517100 395250 505540 517040 594250 746670 751090 635550 682220 622080 643170 574220 734660 548440 535640 735280 705620 567340 477860 362940 516230 515030 614780 734670 745610 656670 697250 628200 665160 584850 737080 576600 558600 725950 672530 541150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2334600000 22079 3051 20679 41612;41613;41614;41615;41616;41617 33448;33449;33450 33450 3 9606 Homo sapiens -0.014970308869806104 QVAEQFLNMR Oxidation (M) 1250.6078 0.60775611 3492 P22695;H3BRG4;H3BSJ9 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 1 0 8 0 1 49.647 49.72 3 0.0011712 13395 20230619_1888_Aki_TMTPro18x_K_F8 96.009 85.552 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22080 3492 20680 41618 33451 33451 2158 1 9606 Homo sapiens -0.007523458310515707 QVAGTMK Unmodified 733.37926 0.37925972 3504 V9HW26;P25705;P25705-2;P25705-3 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 8 0 1 38.115 38.1 2 0.0076725 8718 20230619_1888_Aki_TMTPro18x_K_F8 107.9 43.092 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22081 3504 20681 41619 33452 33452 1 9606 Homo sapiens 0.0019052638273251432 QVAPEKPVKK Unmodified 1122.6761 0.67609367 3649 Q6IBA2;Q59G24;P53999;B7Z1Z0;D6RC37;D6R970 PC4;SUB1 Activated RNA polymerase II transcriptional coactivator p15 yes no 0 0 2 2.5 0.5 1 1 38.423 38.481 4 0.058866 9127 20230619_1881_Aki_TMTPro18x_K_F2 53.569 34.944 96411 54206 135150 147020 186970 201600 147240 208910 132690 107170 207680 186400 130520 114090 173370 60542 122700 94408 89271 50416 134910 141380 188840 199650 150570 210010 138720 116040 206100 183190 137570 117190 172110 64026 117690 89414 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197720000 22082 3649 20682 41620;41621 33453 33453 1 9606 Homo sapiens 0.11966266811123205 QVAQQEAER Unmodified 1057.5152 0.51523593 2035 Q6FHP5;A8K401;P35232;Q6PUJ7;Q53FV0;C9JZ20;C9JW96;E7ESE2;E9PCW0;A8K9G2 PHB;HEL-S-54e Prohibitin yes no 0 0 0 1.5 0.5 1 1 28.735 28.772 2 3.2449E-05 5547 20230619_1880_Aki_TMTPro18x_K_F1 166.61 129.91 39287 15400 55103 57851 93836 85324 65951 94840 69150 34909 76944 91237 53924 65435 77524 15460 80811 75422 36330 14477 55235 55215 93461 84337 68292 94540 70409 40200 77712 89098 57013 65662 78242 19915 77251 71021 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 45870000 22083 2035 20683 41622;41623 33454 33454 1 9606 Homo sapiens -0.011221075729281438 QVAQQEAQR Unmodified 1056.5312 0.53122035 4405 Q99623;F5GY37;F5GWA7;F5H3X6 PHB2 Prohibitin-2 yes no 0 0 0 3 0 1 23.279 23.431 2 0.08807 3884 20230619_1882_Aki_TMTPro18x_K_F3 60.973 34.897 2768.6 2170.7 5312.5 4145.9 7809.3 8461 4934 8679.3 6262.5 2391.5 8359.1 8147.3 3962.8 3850.4 7774.8 1378.3 7676.7 5298.9 2578.8 2002.8 5214.5 4080.7 7831.4 8226.1 5195.7 8669.7 6363 2927.6 8288.4 7864.8 4366.8 3980.9 7796.6 1665.9 7329.5 5000.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2167100 22084 4405 20684 41624 33455 33455 1 9606 Homo sapiens 0.0052159866399961174 QVASEFGLK Unmodified 977.5182 0.51819605 3539 P32929-2;P32929-3;P32929 CTH Cystathionine gamma-lyase yes no 0 0 0 7 0 1 52.238 52.312 2 0.0058812 14642 20230619_1887_Aki_TMTPro18x_K_F7 104.05 57.622 29405 25317 29452 29529 40398 40212 31740 27749 53919 35040 36758 38800 36620 35472 38627 36667 44105 43672 27199 23211 30070 29610 40875 39585 33164 29416 52942 35203 38529 39091 37521 36754 39533 37229 42144 41407 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15291000 22085 3539 20685 41625 33456 33456 1 9606 Homo sapiens 0.028537675519146433 QVATFHNQR Unmodified 1099.5523 0.55229014 4539 Q9H9Y2 RPF1 Ribosome production factor 1 yes yes 0 0 0 8 0 1 29.409 29.43 3 2.0444E-06 5429 20230619_1888_Aki_TMTPro18x_K_F8 179.37 130.28 18143 11953 16094 18801 19735 20980 18563 20101 24176 10847 17243 13382 13431 12439 16483 11020 17047 14169 16741 11006 16588 18440 20188 21019 18956 20349 23977 11561 17829 13461 13984 12786 16706 11292 16285 13435 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28243000 22086 4539 20686 41626 33457 33457 1 9606 Homo sapiens 0.006496087635014192 QVAYIYK Unmodified 883.48035 0.48035398 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;B4DNY3;B4DNA3;B4DUZ8 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 0 0 1.5 0.5 1 1 48.677 48.71 2 0.0077463 13836 20230619_1881_Aki_TMTPro18x_K_F2 122.78 59.934 273290 243680 232080 214320 350370 436380 321570 313230 462650 48562 36770 52385 46833 38121 131710 50618 53191 38587 252530 222860 240950 221900 354570 421520 329790 321290 445060 64302 58495 52705 51664 40435 127640 50262 51551 36831 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98267000 22087 2327 20687 41627;41628 33458 33458 1 9606 Homo sapiens 0.0339530135709083 QVCAGNTHFAVVTVEK Unmodified 1758.8723 0.87230365 391 A0A024R6D1;A0A7I2V5R1;Q8TD19;G3V5V0;A0A7I2V454;A0A7I2V4E9;B3KY50 NEK9 Serine/threonine-protein kinase Nek9 yes no 0 0 0 8 0 1 47.739 47.798 3 3.607E-12 12598 20230619_1888_Aki_TMTPro18x_K_F8 135.23 104.5 45892 38450 44217 49642 52095 57448 51590 58771 55489 50049 57748 62847 59476 53297 56792 61551 68044 80085 42429 35290 45208 49311 53476 57520 52192 59696 56387 51432 59261 62906 60550 55740 58448 62736 65078 75824 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71724000 22088 391 20688 41629 33459 33459 1 9606 Homo sapiens 0.023222391319905 QVCEIIESPLFLK Unmodified 1574.8378 0.83781563 2215 B2R514;E7EM64;Q7L5N1;H7C3T0 COPS6 COP9 signalosome complex subunit 6 yes no 0 0 0 7 0 1 63.687 63.719 3 0.091233 19521 20230619_1887_Aki_TMTPro18x_K_F7 46.481 31.509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22089 2215 20689 41630 33460 33460 1 9606 Homo sapiens 0.07339022991232014 QVCLWNSMEHR Oxidation (M) 1474.6446 0.64455232 4548 Q9HC35;B5MBZ0;Q9HC35-2 EML4 Echinoderm microtubule-associated protein-like 4 yes no 0 1 0 7 0 1 41.477 41.548 3 0.0066708 9882 20230619_1887_Aki_TMTPro18x_K_F7 68.676 56.115 27289 18395 26169 26634 31899 25487 31348 26121 34430 28085 29284 28850 33834 26461 28251 31460 30891 33087 25197 16920 26754 26202 32590 25896 31719 26715 34688 28317 30483 29180 34109 27653 28989 31616 29546 31401 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13540000 22090 4548 20690 41631 33461 33461 2810 1 9606 Homo sapiens -0.07378417276800064 QVCPLDNR Unmodified 1000.476 0.47601365 3729 P62877 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 0 0 0 5 0 1 36.661 36.752 2 0.0025266 8195 20230619_1885_Aki_TMTPro18x_K_F5 125.31 100.39 31601 16449 27632 26587 31269 28783 33070 29064 48951 30416 34369 37614 46259 32625 24338 45995 55437 45936 29124 15171 28442 26040 32233 28948 33703 29724 48334 30931 36456 37712 45791 34551 26963 45930 52675 43666 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42820000 22091 3729 20691 41632 33462 33462 1 9606 Homo sapiens -0.024205311281320974 QVDAESWK Unmodified 961.45051 0.45051041 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;D6R9F8;D6RDJ6;D6RCA5;D6RBR8 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0 1 47.058 47.135 2 0.0017692 12527 20230619_1885_Aki_TMTPro18x_K_F5 113.62 52.661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22092 2326 20692 41633 33463 33463 1 9606 Homo sapiens -0.031756823789010014 QVDGDNSHVEMK Oxidation (M) 1373.5881 0.58814288 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;A0A8V8TLK7;A0A8V8TND0;A0A8V8TLK4;F8WBE5 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 1 0 2 0.816 1 1 1 32.962 33.005 3 9.8862E-05 6858 20230619_1881_Aki_TMTPro18x_K_F2 107.35 82.627 149310 78142 148530 131100 163040 145130 125900 129760 163210 154430 177350 167880 173070 145030 147120 132020 208320 174240 137750 72104 150970 128200 167010 145370 130360 134290 164740 155190 181000 168980 175570 149750 153330 135310 198490 165170 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 188780000 22093 1817 20693 41634;41635;41636 33464;33465;33466 33465 1166 3 9606 Homo sapiens -0.08370766632469895 QVDGDNSHVEMK Unmodified 1357.5932 0.59322826 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;A0A8V8TLK7;A0A8V8TND0;A0A8V8TLK4;F8WBE5 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 1.5 0.5 1 1 37.09 37.12 3 4.3526E-07 8532 20230619_1881_Aki_TMTPro18x_K_F2 153.85 126.2 180810 113470 175470 148170 174590 195020 128600 159200 182520 200800 208280 198370 218630 172850 171460 160550 243940 191340 166900 104280 178440 147430 180350 192820 134240 166100 184100 200630 212780 200510 220520 178620 179080 163330 232340 181600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 258980000 22094 1817 20693 41637;41638 33467 33467 1 9606 Homo sapiens -0.07126462769838326 QVDHLIK Unmodified 851.4865 0.48650199 2345 B3KM73;D3DVL7;B4DU42;Q969Z0-2;Q969Z0;C9J7P5;C9J5A2;C9J347;C9IZN7;C9J618 TBRG4 Protein TBRG4 yes no 0 0 0 6.5 0.5 1 1 40.985 41.066 3 0.003684 9706 20230619_1887_Aki_TMTPro18x_K_F7 114.5 49.74 243230 179790 223400 224180 234900 256220 248010 260670 315230 282760 318850 298230 313380 264900 268930 314390 357370 311030 224620 165040 228760 223220 243560 256770 251440 266510 317350 285120 326520 301060 317970 276960 279350 314840 340750 295630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 234340000 22095 2345 20694 41639;41640 33468 33468 1 9606 Homo sapiens 0.05481819588624148 QVDPAYTGR Unmodified 1005.488 0.48795855 449 A5PKY0;A0A024R7G6;M0R165;A8K5P4;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;K7EJR2;M0R330;M0R1V5;M0QX30 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 4 0 1 36.119 36.165 2 0.007178 8019 20230619_1883_Aki_TMTPro18x_K_F4 90.263 64.369 28195 19227 31912 31077 36985 38150 32637 37318 45174 35839 40625 47280 36161 32728 37022 32355 46843 49004 26072 17708 32173 30492 37890 38009 33562 38128 45101 36654 41744 46942 37115 34229 38146 33466 44739 46360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31414000 22096 449 20695 41641 33469 33469 1 9606 Homo sapiens -0.01456591113299055 QVDPSITR Unmodified 914.48214 0.48214489 2033 A8K3Y8;Q9Y316;Q9Y316-3;A0A1S5UZ25;Q2VIM3 MEMO1 Protein MEMO1 yes no 0 0 0 4 0 1 36.675 36.721 2 0.0050531 8208 20230619_1883_Aki_TMTPro18x_K_F4 114.64 53.667 63908 40655 69796 75945 94909 101550 88278 97365 112160 86480 105020 91303 98411 81079 82945 69422 112690 89917 59057 37533 70830 74065 96409 100580 90133 99412 112530 88177 107680 92137 99921 83405 86167 71157 107380 85270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44168000 22097 2033 20696 41642 33470 33470 1 9606 Homo sapiens 0.02148310375048368 QVDQLTNDK Unmodified 1059.5197 0.51965261 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8 VIM;HEL113 Vimentin yes no 0 0 0 3.5 0.5 1 1 43.066 43.121 2 7.318E-06 10969 20230619_1882_Aki_TMTPro18x_K_F3 206.23 143.9 306960 139240 375790 286120 955050 1197300 499730 690540 718560 478340 762390 904240 610020 653350 709770 300280 781100 722390 283570 128990 384320 288120 935430 1128900 537300 733400 720650 508460 774530 888980 633050 663220 721560 332580 746260 681870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 532910000 22098 3414 20697 41643;41644 33471;33472 33471 2 9606 Homo sapiens -0.007726431500032049 QVDYEINAHK Unmodified 1215.5884 0.58840088 4118 Q9P0B4;Q96IZ6;Q6P1Q9 METTL2A;METTL2B Methyltransferase-like protein 2A;Methyltransferase-like protein 2B yes no 0 0 0 4 0 1 41.824 41.867 3 0.0015346 10358 20230619_1883_Aki_TMTPro18x_K_F4 89.301 70.989 58019 43718 59041 57586 64887 66383 65981 58264 80618 62631 66176 61550 63866 51501 67012 68086 65722 57313 53630 40150 59964 57129 66939 66283 66894 60223 80674 63077 68457 62222 65391 54330 68019 67556 62836 54581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23644000 22099 4118 20698 41645 33473 33473 1 9606 Homo sapiens -0.010769788503012023 QVEEIFNLK Unmodified 1118.5972 0.59717465 2144 X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9;A0A494C0Q7 GTF2I General transcription factor II-I yes no 0 0 0 6.33 0.471 2 1 60.81 60.863 2;3 8.2858E-06 18156 20230619_1887_Aki_TMTPro18x_K_F7 167.12 38.52 270570 227940 251440 264310 215890 292190 272500 256510 308080 315410 315160 344890 367790 314940 281140 415300 386680 435870 250090 208980 256630 264330 229070 292450 272610 266180 312230 316560 325450 347840 369710 331180 293990 416430 369300 413590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 286850000 22100 2144 20699 41646;41647;41648 33474;33475;33476 33476 3 9606 Homo sapiens 0.04261994786179457 QVEELFER Unmodified 1048.5189 0.51892433 2144;1327 A0A1W6S962;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52 GTF2I General transcription factor II-I no no 0 0 0 2.5 0.5 1 1 52.077 52.129 2 0.0026404 15394 20230619_1881_Aki_TMTPro18x_K_F2 123.5 97.564 398100 318090 362800 396620 355250 388160 388320 393540 462420 429550 483900 496210 534810 427050 398080 584160 569050 607150 367790 291890 371540 394000 370640 393310 392030 402730 467670 434250 497600 498660 537700 451240 417680 585150 543070 576290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 460110000 22101 1327;2144 20700 41649;41650 33477 33477 1 9606 Homo sapiens -0.00339437799038933 QVEHPLLSGLLYPGLQALDEEYLK Unmodified 2724.4374 0.43743311 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2;A0A0C4DGZ5;A0A6Q8PFX4 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 8 0 1 64.435 64.456 3 0.00033911 19745 20230619_1888_Aki_TMTPro18x_K_F8 72.033 46.812 10504 6071 8115.9 9190.3 7135.4 9206 8192.1 9727.3 6251.1 10743 9908.9 11281 11224 8474.2 12455 13108 12591 15263 9676.5 5591.4 8435.1 9021.7 7528.9 9312.6 8150.5 9924.9 6645.6 10804 10068 11332 11464 9088.2 12655 13213 12064 14464 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70898000 22102 1102 20701 41651 33478 33478 1 9606 Homo sapiens 0.1441918950681611 QVEIAQR Unmodified 842.46102 0.46101552 3376 Q5T6L4;P00966;A8KAP9;Q5T6L5;Q5T6L6;A0A0S2Z3B6;A0A0S2Z3D8 ASS;ASS1 Argininosuccinate synthase yes no 0 0 0 3.5 0.5 1 1 34.725 34.781 2 0.020097 7488 20230619_1882_Aki_TMTPro18x_K_F3 105.04 27.366 50168 27171 56315 138550 267680 263170 163150 204630 188010 64095 86963 167690 106320 82041 117550 56373 118200 156730 46338 25760 60374 131910 258260 255050 171150 209170 185850 75605 95442 162350 108420 86200 119030 62864 113360 147660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84345000 22103 3376 20702 41652;41653 33479;33480 33479 2 9606 Homo sapiens 0.033483450661947245 QVENAGAIGPSR Unmodified 1197.6102 0.61019895 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q1WWK5;B4DTL7;K7ENL0;K7EPY1;K7EJV0 SEPT9 Septin-9 yes no 0 0 0 4.5 0.5 1 1 36.531 36.6 2 1.7093E-09 8108 20230619_1885_Aki_TMTPro18x_K_F5 184.55 152.79 139770 105860 130390 129180 146690 154800 160790 162620 202210 201010 208410 215360 221870 169670 175330 200840 243720 202640 129110 97140 133480 128920 151480 154800 162580 166560 203940 201500 214100 216350 223740 178250 183000 201370 232240 192600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 289530000 22104 541 20703 41654;41655 33481;33482 33482 2 9606 Homo sapiens 0.019298258982644256 QVEPPAK Unmodified 767.41775 0.41775372 2288;2925 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;P29692;P29692-3;E9PK01;P29692-4;E9PQZ1;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;E9PK06 EEF1D Elongation factor 1-delta no no 0 0 0 4.5 0.5 1 1 38.575 38.643 2 0.05224 8976 20230619_1885_Aki_TMTPro18x_K_F5 85.212 35.853 27510 10580 35391 32649 56411 56488 40901 52622 47660 30912 51234 55162 42699 40518 47311 23605 63843 45774 25414 9894.7 35587 31429 56456 55176 42381 53395 48241 33152 52060 54371 44112 41378 48795 25322 60799 43307 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32108000 22105 2288;2925 20704 41656;41657 33483 33483 1 9606 Homo sapiens 0.02474155288905422 QVEQLEK Unmodified 872.46035 0.46034682 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 3.33 0.471 2 1 42.164 42.22 2;3 0.015098 10572 20230619_1882_Aki_TMTPro18x_K_F3 117.4 15.755 133000 99625 153110 145380 192940 205040 166950 181410 185960 133690 177550 181690 166480 150880 160480 125780 205900 187370 123070 91603 154400 143800 196450 202210 170500 185620 187850 139210 182110 181200 170080 155350 165590 130380 196430 177380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65267000 22106 3152 20705 41658;41659;41660 33484;33485 33484 2 9606 Homo sapiens 0.019015056264720442 QVEVINFGDCLVR Unmodified 1547.7766 0.77661235 162 A0A024R1U0;P46060;B4DY16;B4E0U0;H0Y4Q3 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 0 7 0 1 60.399 60.442 2 0.003252 17981 20230619_1887_Aki_TMTPro18x_K_F7 104.59 80.211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22107 162 20706 41661 33486 33486 1 9606 Homo sapiens 0.02463511011819719 QVFDQYVK Unmodified 1025.5182 0.51819605 1699 A0A7P0T8N8;O14776-2;O14776;G3V220 TCERG1 Transcription elongation regulator 1 yes no 0 0 0 7 0 1 51.627 51.701 2 2.2915E-06 14343 20230619_1887_Aki_TMTPro18x_K_F7 171.53 126.22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22108 1699 20707 41662 33487 33487 1 9606 Homo sapiens 0.0064576755189591495 QVFEGQNR Unmodified 976.47264 0.47264284 193 Q53FS4;B2R774;A0A024R2A7;P49257 LMAN1 Protein ERGIC-53 yes no 0 0 0 4 0.816 1 1 1 35.358 35.448 2 0.00086108 7711 20230619_1883_Aki_TMTPro18x_K_F4 123.98 85.192 21850 15235 22376 23866 30101 27636 25618 25386 30209 21891 31365 33754 31187 27259 27443 25740 36444 31812 20189 14025 22804 23429 30494 27611 26234 26005 30528 22686 32131 33504 31670 28248 28455 26241 34750 30168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15654000 22109 193 20708 41663;41664;41665 33488;33489;33490 33489 3 9606 Homo sapiens -0.016534579104700242 QVFGEATK Unmodified 878.44978 0.44978213 1270 F8W787;A0A1B0GW44;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;V9HWI3;C9JH19;P07339;A0A1B0GVP3;A0A1B0GU92;A0A1B0GU03;F8WD96 CTSD;HEL-S-130P Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 0 0 0 5.5 0.5 1 1 44.59 44.674 2 0.0018681 11569 20230619_1886_Aki_TMTPro18x_K_F6 135.79 87.287 81878 53675 60148 101760 101770 113210 123770 124390 160280 105150 112100 129780 120630 101330 100800 105100 146400 135340 75450 49556 63830 98829 103110 113760 124500 125790 159100 108130 117750 129590 121970 105700 105380 107240 139560 128270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208580000 22110 1270 20709 41666;41667 33491 33491 1 9606 Homo sapiens 0.005695229720458883 QVFGHLEFLSGEK Unmodified 1489.7565 0.75652884 3956 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 yes yes 0 0 0 7.5 0.5 1 1 57.49 57.543 3 4.8803E-07 16751 20230619_1888_Aki_TMTPro18x_K_F8 119.96 94.245 89751 78822 95124 104170 92450 109940 106470 106770 115140 116870 110500 116070 129680 100820 105980 131360 122690 142670 83069 72350 96213 103170 96656 110630 106830 109570 116680 117530 114460 117350 130560 106190 109250 132060 117370 135320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 210950000 22111 3956 20710 41668;41669 33492 33492 1 9606 Homo sapiens 0.03124083343482198 QVFGSLESR Unmodified 1021.5193 0.51925868 4070 Q5U5Z3;Q9UL42 PNMA2 Paraneoplastic antigen Ma2 yes no 0 0 0 6.5 0.5 1 1 46.49 46.576 2 0.0013608 12008 20230619_1887_Aki_TMTPro18x_K_F7 116.52 87.368 191410 166770 193480 180630 158590 175280 202520 187870 240720 221270 225350 210290 244370 192680 220630 246820 248070 237490 177070 152780 195780 181350 168700 178020 202850 192000 242400 221550 232660 213480 247600 202270 226420 246560 237010 225710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 175140000 22112 4070 20711 41670;41671 33493;33494 33494 2 9606 Homo sapiens 0.009359819208043518 QVFLATWK Unmodified 991.5491 0.54910224 1172 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087X253;B4DWG4;B4E261;Q96EL6;B4DIL5 AP2B1;DKFZp781K0743 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 4.5 0.5 2 2 59.919 59.946 2;3 0.010689 17875 20230619_1885_Aki_TMTPro18x_K_F5 106.6 38.943 120630 117640 120710 121810 125290 156050 135530 138740 188700 99051 103100 105590 113090 92780 114040 121420 107700 120750 111680 107690 122720 123180 130280 154790 137650 141850 185520 102630 110270 106550 115160 97656 115640 121500 103200 114650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 95446000 22113 1172 20712 41672;41673;41674;41675 33495;33496 33496 2 9606 Homo sapiens 0.05298965656800192 QVFQSLPK Unmodified 945.52837 0.5283668 1145 A0A0S2Z5X1;Q96DA6;A0A8I5KQT8;Q96DA6-2;G5E9V2;F2Z3A7;A0A2R8Y817 DNAJC19 Mitochondrial import inner membrane translocase subunit TIM14 yes no 0 0 0 2.5 0.5 1 1 51.02 51.078 2;3 2.0187E-05 14591 20230619_1882_Aki_TMTPro18x_K_F3 137.84 66.62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22114 1145 20713 41676;41677 33497;33498 33498 2 9606 Homo sapiens 0.05342375277143674 QVFTNAEVYNCR Unmodified 1499.6827 0.68271197 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 0 7 0 1 46.814 46.902 2 7.9062E-18 12144 20230619_1887_Aki_TMTPro18x_K_F7 212.82 201.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22115 4666 20714 41678 33499 33499 1 9606 Homo sapiens -0.04714208090467764 QVGDFHQVIIR Unmodified 1310.7095 0.70951906 2430 B3KW79 yes yes 0 0 0 8 0 1 45.335 45.363 3 7.3756E-05 11623 20230619_1888_Aki_TMTPro18x_K_F8 123.95 72.094 81652 60791 76541 97917 109290 118160 101830 108200 114500 95737 93113 89768 96477 87048 87254 108380 103540 109610 75420 55966 78804 96007 110730 117660 103480 110860 115070 97284 96669 91368 97984 91002 89907 108570 98954 104070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59922000 22116 2430 20715 41679 33500 33500 1 9606 Homo sapiens 0.06659268583030098 QVGLMVQER Oxidation (M) 1074.5492 0.5491786 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GW82;A0A1B0GUA1;A0A1B0GTJ4;A0A1B0GV49;A0A0J9YWF7;A0A1B0GUY0 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 1 0 5 0 1 39.394 39.485 2 0.029611 9300 20230619_1885_Aki_TMTPro18x_K_F5 86.67 70.526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22117 1415 20716 41680 33501 33501 881 1 9606 Homo sapiens 0.014885975944935126 QVGVGYVDSIQR Unmodified 1319.6834 0.68336389 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;B4DN49;V9H023;V9H0D5;V9H0B2;V9H015;V9H062 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 0 6 0 1 47.186 47.266 2 4.4758E-11 12684 20230619_1886_Aki_TMTPro18x_K_F6 230.95 182.39 52692 45933 55747 49612 44073 48866 54717 49023 55047 60826 59320 61432 69312 52426 56344 67812 63147 64064 48766 42080 56162 49833 46968 49499 54584 50410 56272 60845 61109 62029 69762 55215 57961 67656 60359 60885 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58149000 22118 3585 20717 41681 33502 33502 1 9606 Homo sapiens 0.036309546208940446 QVGVNPTSIDSVVIGK Unmodified 1611.8832 0.88318591 944 A0A5K1VW64;F5HRF8;A0A0A0MRW7;Q7Z2E3-13;Q7Z2E3-3;Q7Z2E3-9;Q7Z2E3-11;Q7Z2E3-8;Q7Z2E3-7;Q7Z2E3 APTX Aprataxin yes no 0 0 0 8 0 1 59.245 59.286 3 2.7219E-05 17488 20230619_1888_Aki_TMTPro18x_K_F8 96.489 72.884 48671 40399 60376 49430 47074 56976 66605 61789 64567 55271 62707 54655 61088 50417 60716 70664 63798 69661 45099 37060 60109 49316 50454 57136 65970 62619 65764 56197 64315 55449 62374 53227 61976 70593 61053 66153 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 10781000 22119 944 20718 41682 33503;33504 33503 2 9606 Homo sapiens 0.10171964777964604 QVHCEEFIPEFEK Unmodified 1690.7661 0.76610724 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 4 0.816 1 1 1 52.737 52.789 3 0.00039825 15266 20230619_1883_Aki_TMTPro18x_K_F4 93.348 80.23 191500 157060 183400 204670 202090 222470 200210 214190 215490 264710 266010 297430 288710 234810 284490 289220 292250 365550 177010 144180 187380 202980 208400 223410 202570 220710 220970 265670 271810 298200 293640 247320 289840 293990 280050 346120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 340910000 22120 307 20719 41683;41684;41685 33505;33506 33505 2 9606 Homo sapiens -0.0516451643329674 QVHEIQSCMGR Oxidation (M) 1359.6024 0.60235316 1316 A0A1W2PRP7;A0A1W2PQ77;I3NI02;A0A1W2PR23;A0A1W2PPG5;O14653-2;O14653;A0A1W2PPP5;A0A1W2PR02;A0A1W2PPW8;I3L4Z6;A0A1W2PPG1;A0A1W2PRC2;A0A1W2PQM3;A0A1W2PS81;E7EQ34;I3L0K1;B4E141;O14653-3;A0A1X7SBU8;A0A1W2PRV0;A0A1W2PPJ0;I3L1K7;A0A1W2PQ06 GOSR2 Golgi SNAP receptor complex member 2 yes no 0 1 0 4.5 0.5 1 1 28.877 28.95 3 0.016775 5149 20230619_1883_Aki_TMTPro18x_K_F4 59.57 50.84 8928 6228 10027 11430 15012 12619 14100 13439 14570 11405 11760 11208 11998 10502 10160 11432 13886 12023 8256.3 5745.7 10175 11122 15136 12690 14277 13619 14700 11634 12205 11366 12158 10906 10575 11504 13237 11420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 16459000 22121 1316 20720 41686;41687 33507;33508 33507 824 2 9606 Homo sapiens -0.06306392685178253 QVHEIQSCMGR Unmodified 1343.6074 0.60743853 1316 A0A1W2PRP7;A0A1W2PQ77;I3NI02;A0A1W2PR23;A0A1W2PPG5;O14653-2;O14653;A0A1W2PPP5;A0A1W2PR02;A0A1W2PPW8;I3L4Z6;A0A1W2PPG1;A0A1W2PRC2;A0A1W2PQM3;A0A1W2PS81;E7EQ34;I3L0K1;B4E141;O14653-3;A0A1X7SBU8;A0A1W2PRV0;A0A1W2PPJ0;I3L1K7;A0A1W2PQ06 GOSR2 Golgi SNAP receptor complex member 2 yes no 0 0 0 6 0 1 34.844 34.897 3 1.4197E-09 7581 20230619_1886_Aki_TMTPro18x_K_F6 160.67 150.15 18623 15598 17468 19485 21213 24732 22553 23073 27875 19494 23767 20221 25004 20198 19774 25109 27374 22595 17214 14311 17913 19424 21794 24566 22820 23585 27901 19935 24602 20526 25234 21096 20646 24998 26085 21505 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21097000 22122 1316 20720 41688 33509 33509 1 9606 Homo sapiens -0.05062088822546684 QVHIGQLYSTDK Unmodified 1387.7096 0.70957864 4554 Q9HD34 LYRM4 LYR motif-containing protein 4 yes yes 0 0 0 8 0 1 45.617 45.656 3 0.0014401 11798 20230619_1888_Aki_TMTPro18x_K_F8 83.617 52.389 45936 41834 47972 50137 43892 51367 55309 52214 55830 64189 64600 77046 64853 58256 66413 65018 71449 80387 42521 38356 48523 49977 46223 51870 55131 53622 57233 64589 65980 76926 66276 61071 67778 66094 68375 76157 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62322000 22123 4554 20721 41689 33510 33510 1 9606 Homo sapiens 0.031232237923632056 QVHPDTGISSK Unmodified 1167.5884 0.58840088 73;721;4226 U3KQK0;A0A024QZZ7;A0A024RCJ9;A0A024RCL8;B2R4S9;B4DR52;I6L9F7;Q5QNW6-2;Q99879;Q99877;Q5QNW6;P62807;P58876;O60814;Q93079;Q99880;P57053;A8K9J7;Q0D2M2;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q8N257 HIST1H2BN;HIST1H2BD;HIST1H2BK;HIST1H2BI;HIST1H2BM;HIST2H2BF;HIST1H2BC;HIST1H2BH;HIST1H2BL;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST3H2BB Histone H2B;Histone H2B type 2-F;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-H;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B no no 0 0 0 4.75 2.33 1 1 1 1 2 1 1 35.879 35.928 3 3.7121E-09 7765 20230619_1888_Aki_TMTPro18x_K_F8 180.09 120.18 3772800 1977100 3659800 3570600 4247100 4423900 3584700 4244500 4254900 3509000 4601300 4676600 4548400 3729500 3876400 2644300 4854100 4745700 3479900 1826200 3734400 3484200 4346500 4402200 3676900 4327000 4307800 3621600 4702000 4659700 4611000 3824300 4000200 2796800 4634100 4485600 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 84961000000 22124 73;721;4226 20722 41690;41691;41692;41693;41694;41695;41696;41697 33511;33512;33513;33514;33515;33516;33517;33518 33518 8 9606 Homo sapiens 0.011310211496947886 QVHPFHVYPQPGMQR Oxidation (M) 1835.889 0.88895677 2751 C9JFK9;O95817;Q53GY1;A0A872G2N3 BAG3 BAG family molecular chaperone regulator 3 yes no 0 1 0 3 0 1 36.833 36.887 4 0.037221 8329 20230619_1882_Aki_TMTPro18x_K_F3 55.656 46.605 17888 13762 18056 19218 23206 24428 22400 24222 23919 23308 23282 26735 23380 23369 21995 18666 30779 27817 16536 12646 18413 19023 23663 24298 22683 24725 24265 23706 23947 26841 23826 23966 22853 19360 29344 26335 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14613000 22125 2751 20723 41698 33519 33519 1644 1 9606 Homo sapiens 0.004447848086556405 QVIAVAR Unmodified 755.46537 0.46537261 4705;2169 A8MZF9;P55039;J3QRI9;B4DMP8;J3QKW7;Q9Y295 DRG2;DRG1 Developmentally-regulated GTP-binding protein 2;Developmentally-regulated GTP-binding protein 1 no no 0 0 0 4.5 3.5 1 1 38.153 38.146 2 0.031875 8735 20230619_1888_Aki_TMTPro18x_K_F8 94.407 27.414 326800 237960 274630 313590 338440 337710 321870 321280 421340 321540 334530 335560 363340 278120 291860 336560 434440 335670 301570 218570 284450 310720 346060 339350 328490 329410 419930 325570 348480 338090 366510 292010 306100 337110 413610 319200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 335810000 22126 2169;4705 20724 41699;41700 33520;33521 33521 2 9606 Homo sapiens 0.07785854279745763 QVIEYAR Unmodified 877.46577 0.46576654 1850 Q5U0B3;R4GMR5;V9HW09;A0A8V8TQ44;P48556 PSMD8;HEL-S-91n 26S proteasome non-ATPase regulatory subunit 8 yes no 0 0 0 5 0.816 1 1 1 39.964 40.038 2 0.013849 9512 20230619_1885_Aki_TMTPro18x_K_F5 113.41 65.496 127190 101020 107500 121020 152900 158270 141390 146100 182810 159380 168420 161490 173460 137950 147980 186050 199910 169980 117440 92666 111600 121050 154950 156970 144470 150390 183290 160480 173620 163130 175660 145640 153990 185170 190560 161730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 211500000 22127 1850 20725 41701;41702;41703 33522 33522 1 9606 Homo sapiens 0.022132292089395378 QVIGTGSFFPK Unmodified 1179.6288 0.62880913 3865 Q13642-4;Q13642-5;Q13642-1;Q53FI7;B7Z4B7;B7Z5V0;B7Z9A1;B7Z5T3;B7Z6U8;Q5JXI8;Q13642;A0A494C0D6;Q5JXI3;Q5JXH8;Q5JXH7;Q5JXI2;A0A0D9SFZ9;Q5JXH9;A0A0D9SFB0;A0A0D9SFI6;Q13642-3 FHL1 Four and a half LIM domains protein 1 yes no 0 0 0 3 0 1 58.159 58.19 2 0.00026935 17674 20230619_1882_Aki_TMTPro18x_K_F3 131.83 110.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22128 3865 20726 41704 33523 33523 1 9606 Homo sapiens 0.04617987540109425 QVIIQGFR Unmodified 959.55525 0.55525025 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 4 0 1 49.448 49.482 2 0.010397 13758 20230619_1883_Aki_TMTPro18x_K_F4 114.43 91.906 130000 106720 128370 125850 109640 133420 127480 132390 140130 112070 121280 107130 123310 99509 130990 126600 145660 121820 120200 97866 130250 125670 115950 134300 127950 134770 141200 114240 125350 108840 126140 104360 133840 126540 139060 115850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65921000 22129 4191 20727 41705 33524 33524 1 9606 Homo sapiens 0.07385483888322142 QVIQGLEALK Unmodified 1097.6445 0.64445919 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5;G3V2P7 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 0 8 0 1 60.129 60.166 3 1.3545E-05 17836 20230619_1888_Aki_TMTPro18x_K_F8 145.99 99.829 51322 41410 52869 51517 39479 47168 50678 51940 57747 56365 52104 48913 58929 49529 49984 59887 58865 50627 47464 37998 53370 51159 42396 48131 50694 52853 58218 56503 53998 50034 59509 51615 51526 59474 56179 48214 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57661000 22130 3808 20728 41706 33525 33525 1 9606 Homo sapiens 0.0995427405719056 QVIQQNPALLPALLQQLGQENPQLLQQISR Unmodified 3377.8783 0.87832231 450 A8K1J3;A0A024R7G8;P54725-3;P54725;K7EQ16;B4DDJ7 RAD23A UV excision repair protein RAD23 homolog A yes no 0 0 0 5 0 1 66.239 66.282 3 1.8429E-16 20690 20230619_1885_Aki_TMTPro18x_K_F5 145.18 137.41 0 0 806.63 2015.8 1135.6 1393.5 919.03 1725.6 2183.4 0 1123.1 1454.6 749.8 1366.8 1578.5 1662.9 1527.4 1642.7 0 0 764.81 1855.1 1149.3 1458.4 978.91 1694.3 2100.3 0 1189 1411.6 822.46 1423.4 1588.3 1665 1462.7 1560 0 0 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 80883000 22131 450 20729 41707 33526 33526 1 9606 Homo sapiens 0.28449828423617873 QVISLQTK Unmodified 915.53893 0.53893149 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 2 0 1 47.483 47.559 2 0.001198 13321 20230619_1881_Aki_TMTPro18x_K_F2 146.79 38.89 114290 101340 107100 110780 108300 124430 111900 102830 136480 113050 131900 108270 111190 105130 113560 128150 133340 104820 105680 92847 109430 111300 112590 124320 113380 106860 137360 113650 134480 110150 114350 109690 116600 127080 127190 99906 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53098000 22132 1853 20730 41708 33527 33527 1 9606 Homo sapiens 0.07778357931556457 QVKPYVEEGLHPQIIIR Unmodified 2018.1313 0.13129553 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;F8WAM2 CCT7 T-complex protein 1 subunit eta yes no 0 0 1 1 0 1 51.568 51.568 3 1.2905E-13 14998 20230619_1880_Aki_TMTPro18x_K_F1 161.24 141.49 52422 42597 51340 61207 49513 47846 52443 49274 46803 65875 62232 41920 49567 31995 56183 34422 32717 21151 48463 39148 52262 60082 51576 49443 52564 50709 48696 64905 62449 43302 51185 33508 55596 33897 31451 20273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60467000 22133 4005 20731 41709 33528 33528 1 9606 Homo sapiens 0.16295513365662373 QVLDAVYYLHR Unmodified 1375.7248 0.72483478 4051 Q5SQQ7;Q8IU85-2;Q8IU85 CAMK1D Calcium/calmodulin-dependent protein kinase type 1D yes no 0 0 0 2 0 1 54.765 54.789 3 2.0112E-06 16502 20230619_1881_Aki_TMTPro18x_K_F2 153.95 121.62 16855 13232 16633 15895 15510 15520 16382 18201 18665 15842 16020 15207 20431 16666 16105 19058 19591 19472 15580 12139 16890 15838 16212 15790 16548 18341 18779 16122 16746 15530 20506 17276 16661 19128 18710 18491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72854000 22134 4051 20732 41710 33529 33529 1 9606 Homo sapiens 0.05200135380187021 QVLDGNSNPYDIFLK Unmodified 1721.8625 0.86245047 553 Q6MZT2;A0A024R906;Q16832 DKFZp686D1354;DDR2 Discoidin domain-containing receptor 2 yes no 0 0 0 7.5 0.5 1 1 62.917 62.945 3 0.005817 19169 20230619_1887_Aki_TMTPro18x_K_F7 68.481 49.405 105710 83238 106040 105860 93268 109230 104840 107290 133510 100740 108640 106660 125250 86269 115700 120590 100980 110570 97725 76403 107500 105110 98292 110130 105950 109580 133300 102400 113350 107390 126690 91551 117040 120060 96827 105090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 165630000 22135 553 20733 41711;41712 33530;33531 33530 2 9606 Homo sapiens 0.030393743983267996 QVLEHLLK Unmodified 978.58622 0.58621603 4357 Q96H20-2;Q96H20 SNF8 Vacuolar-sorting protein SNF8 yes no 0 0 0 1 0 1 52.414 52.414 3 0.00073313 15349 20230619_1880_Aki_TMTPro18x_K_F1 116.3 46.351 40193 26156 32977 43601 30951 53461 39748 37438 57283 51889 48588 54180 67070 52897 47865 63383 57687 57579 37063 24106 34159 42668 32750 52868 40091 39753 57026 51781 51085 54846 66935 55171 49636 63159 55098 54750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43031000 22136 4357 20734 41713 33532 33532 1 9606 Homo sapiens 0.0960663720256889 QVLEPSFR Unmodified 974.51853 0.5185304 3510 Q53YD7;P26641;P26641-2 EEF1G Elongation factor 1-gamma yes no 0 0 0 6 0.816 1 1 1 46.1 46.184 2 0.0022146 12162 20230619_1886_Aki_TMTPro18x_K_F6 130.28 79.647 640770 467040 522260 558730 520580 675310 609000 601530 722950 817760 708590 785500 949860 730420 595160 1136100 1018600 977880 591190 428570 540710 558260 544490 672150 612450 625280 730420 813860 738340 797370 944920 776890 637780 1124500 970250 930620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2567700000 22137 3510 20735 41714;41715;41716 33533;33534 33534 2 9606 Homo sapiens 0.030251872717599326 QVLHTFK Unmodified 871.49159 0.49158736 4434 Q9BTV5;M0QY68 FSD1 Fibronectin type III and SPRY domain-containing protein 1 yes no 0 0 0 2.5 0.5 1 1 42.071 42.142 3 0.075925 10824 20230619_1881_Aki_TMTPro18x_K_F2 48.423 24.468 116530 87035 125410 130070 156140 175130 145910 148330 171000 89245 107200 100760 94266 80210 126380 83330 125290 105010 107760 80050 127160 128340 159510 172970 148450 151800 169970 93868 112460 101120 98183 83611 127630 85045 119750 99587 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70699000 22138 4434 20736 41717;41718 33535 33535 1 9606 Homo sapiens 0.05070123451230302 QVLIASHLPSYELR Unmodified 1624.8937 0.89369102 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 1.5 0.5 1 1 52.586 52.603 3 1.0745E-06 15592 20230619_1881_Aki_TMTPro18x_K_F2 123.68 93.193 65485 56705 61809 54769 49272 62130 57054 55838 67437 76509 67481 73960 73343 63404 69057 79917 72573 70564 60546 51901 62864 55624 52465 62148 57428 58029 68185 76127 69540 74802 74474 66607 70551 79496 69389 67129 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127060000 22139 3833 20737 41719;41720 33536 33536 1 9606 Homo sapiens 0.10623992223099776 QVLIRPCSK Unmodified 1099.6172 0.61719858 3065;2214 H3BN98;I3L246;H3BV27;H3BT37;I3L303;I3L3P7;B2R4W8;P62244;A8K7H3 RPS15A;hCG_1994130 40S ribosomal protein S15a no no 0 0 1 4.5 0.5 1 1 40.223 40.289 3 0.0043221 9628 20230619_1885_Aki_TMTPro18x_K_F5 82.831 58.055 482880 536550 552100 405280 636170 466750 614310 499580 498480 441220 476690 326930 407110 260990 536890 355800 308690 207970 448030 489870 555200 421950 651060 469350 617010 506710 513450 445520 486470 335340 422970 276660 530040 348440 296860 199470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 339270000 22140 3065;2214 20738 41721;41722 33537;33538 33538 2 9606 Homo sapiens 0.07137467245115658 QVLNQDLTFQHIK Unmodified 1582.8467 0.84674083 4079 Q5VWZ2-2;Q5VWZ2 LYPLAL1 Lysophospholipase-like protein 1 yes no 0 0 0 1 0 1 51.981 51.981 3 2.2488E-11 15168 20230619_1880_Aki_TMTPro18x_K_F1 188.13 129.02 176990 146920 164070 196210 186760 202080 193770 187620 208180 199800 182420 196400 215200 181070 213210 198470 220980 251180 163570 134900 168280 194100 192370 203560 195390 193050 210350 201200 189970 198930 218500 188330 217190 202150 211570 237910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162680000 22141 4079 20739 41723 33539 33539 1 9606 Homo sapiens 0.07863132671923267 QVLQLLS Unmodified 799.48035 0.48035398 4416 Q9BRJ6;A0A024R836;H7C0T1;H7C2R9 C7orf50;MGC11257 Uncharacterized protein C7orf50 yes no 0 0 0 1 0 1 63.222 63.222 2 0.065936 19806 20230619_1880_Aki_TMTPro18x_K_F1 79.027 75.174 12183 10909 11029 11796 11362 16461 13313 12613 16631 8461.2 9011.8 12266 8738.6 8868.8 11208 11348 13669 11354 11263 9992.8 11315 11901 11867 16194 13404 13044 16423 8906.9 9621.3 12160 9063.8 9380.6 11489 11364 13038 10792 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28278000 22142 4416 20740 41724 33540 33540 1 9606 Homo sapiens 0.07259301357089498 QVLVAPGNAGTACSEK Unmodified 1600.7879 0.78790532 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2;F8WD69;C9JBJ1;C9JTV6;C9JZG2;C9JKQ7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 6.5 0.5 1 1 45.867 45.954 3 2.2912E-08 12110 20230619_1886_Aki_TMTPro18x_K_F6 135.55 109.02 127990 95767 118690 124790 142510 155530 151140 140780 175810 149250 155700 153060 179980 129140 137750 158200 175020 163440 118210 87944 121750 124020 146400 154590 152590 145070 176870 150560 161700 154420 180780 135660 142980 158740 167020 155220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 628460000 22143 3488 20741 41725;41726 33541 33541 1 9606 Homo sapiens 0.011542883152969807 QVMMFSATLSK Oxidation (M) 1257.6097 0.60972994 724 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;F6TRA5;Q59G92;A0A0A0MT12;B4DIJ6;B4DIZ8;A0A140T973;A0A140T9K1;H0YCC6 DDX39B;hCG_2005638 Spliceosome RNA helicase DDX39B yes no 0 1 0 3 0 1 55.471 55.512 3 0.0070809 16562 20230619_1882_Aki_TMTPro18x_K_F3 71.268 47.663 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22144 724 20742 41727 33542 33542 432 1 9606 Homo sapiens -0.008770531374466373 QVMMFSATLSK Unmodified 1241.6148 0.61481532 724 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;F6TRA5;Q59G92;A0A0A0MT12;B4DIJ6;B4DIZ8;A0A140T973;A0A140T9K1;H0YCC6 DDX39B;hCG_2005638 Spliceosome RNA helicase DDX39B yes no 0 0 0 4 0 1 59.72 59.722 3 0.0003531 18212 20230619_1883_Aki_TMTPro18x_K_F4 98.105 64.88 46626 39415 42722 38839 38798 48651 44665 48058 55132 31191 27365 26732 27987 30071 38289 30648 30834 32725 43092 36085 43646 39440 40839 48438 45019 48666 54396 32341 29434 27470 29085 30922 38300 30934 29587 31054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34489000 22145 724 20742 41728 33543 33543 1 9606 Homo sapiens 0.0036725072518493107 QVMVVPVGPTCDEYAQK Oxidation (M) 1935.907 0.90703418 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 1 0 5.5 0.5 1 1 52.12 52.195 3 9.888899999999999E-19 14845 20230619_1886_Aki_TMTPro18x_K_F6 184 168.84 209250 167320 193930 204280 181350 191180 214780 195290 208720 266990 274920 252650 274870 209130 251610 282540 250070 294660 193340 153510 198140 203130 190170 194480 214500 201220 215850 265410 278810 255730 279200 221210 256370 283310 239590 279580 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 180820000 22146 2326 20743 41729;41730 33544;33545;33546 33546 1436 3 9606 Homo sapiens -0.02348305842156151 QVNELVR Unmodified 856.47667 0.47666558 99 A0A024R0L6;Q15102;M0R389;M0R1K3 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma yes no 0 0 0 4.5 0.5 1 1 39.233 39.3 2 0.02501 9263 20230619_1883_Aki_TMTPro18x_K_F4 98.458 5.9878 145010 103710 123920 149860 160630 169120 150010 159050 203310 134370 179140 165600 164020 138230 151810 141610 213240 152820 133820 95363 128330 147710 163740 169290 153500 162530 202850 138200 184150 165850 167370 143670 157880 142940 203010 145260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 463540000 22147 99 20744 41731;41732 33547 33547 1 9606 Homo sapiens 0.042686315832384025 QVNEPHIR Unmodified 991.51993 0.51992738 883 Q8TBN2;A0A087X0S5;A0A384P5H7;P12109 COL6A1 Collagen alpha-1(VI) chain yes no 0 0 0 4 0.816 1 1 1 31.174 31.25 3 0.00026562 5962 20230619_1883_Aki_TMTPro18x_K_F4 152.63 98.019 92608 66310 84792 92916 123950 117040 123900 122910 154200 97196 124770 141250 118860 111540 111640 103250 129720 118520 85506 60953 87419 91948 125540 116670 125790 124470 153980 101030 129250 140330 121250 115520 114600 104800 123870 112450 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 237920000 22148 883 20745 41733;41734;41735 33548;33549;33550;33551 33549 4 9606 Homo sapiens 0.02382821360527032 QVNYEVDRR Unmodified 1177.584 0.5839842 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49;Q59FY4 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 1 4 0 1 32.622 32.679 3 0.00077557 6613 20230619_1883_Aki_TMTPro18x_K_F4 108.26 58.844 60271 47001 63779 58571 52221 60276 56734 52906 68535 56266 74459 66594 64480 51376 58493 70434 89600 60754 55742 43134 64286 58236 55307 60652 57342 54682 69308 57024 75612 66682 65853 54493 61356 69900 85228 57913 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66898000 22149 3833 20746 41736 33552 33552 1 9606 Homo sapiens 0.0022955672679927375 QVPDTSVQETDR Unmodified 1373.6423 0.64228694 586 H0YK61;A0A024R9N3;Q5J8M3;S4R329;H0YNK0;H0YNK8;H0YLP8;A0A0S2Z598;Q5J8M3-3;Q5J8M3-2 EMC4;TMEM85 ER membrane protein complex subunit 4 yes no 0 0 0 1 0 1 37.15 37.15 2 0.00036961 8851 20230619_1880_Aki_TMTPro18x_K_F1 110.54 85.324 12025 9869.9 14207 15899 20903 25990 18691 18646 25795 16226 19301 27210 21407 17395 19622 17094 23548 24528 11136 9083 14367 15674 21152 25327 19182 19491 25590 16881 20253 26757 21698 18257 20186 17608 22500 23214 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17534000 22150 586 20747 41737 33553 33553 1 9606 Homo sapiens -0.029588512092459496 QVPFNEVR Unmodified 987.51378 0.51377937 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;C9JAJ4 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 0 5.5 0.5 1 1 43.248 43.335 2 0.083416 10931 20230619_1885_Aki_TMTPro18x_K_F5 71.379 31.111 453890 345170 444890 444500 469770 522510 477620 468980 585570 548120 580740 589760 571200 474510 519790 597270 580670 572990 419440 316910 453040 441750 486400 521190 484530 484940 590200 551060 595660 592900 580790 499740 533250 596670 554940 544520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 428430000 22151 1029 20748 41738;41739 33554 33554 1 9606 Homo sapiens 0.01952303128996391 QVPGGGGGGGSGGGGGSGGGGSGGGR Unmodified 1842.7953 0.79532697 4661 Q9UHB9;Q9UHB9-4;Q9UHB9-2;K7EN53;K7EQC2 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 0 5.5 0.5 1 1 28.779 28.831 3 1.4487E-13 5257 20230619_1885_Aki_TMTPro18x_K_F5 123.65 117.21 981.4 0 0 1710.9 0 814.35 0 1273.4 0 0 1171.7 1559.8 1405.3 746.15 1011.1 1569.2 0 1767.2 894.3 0 0 1568.5 0 895.42 0 1234.5 0 0 1086.7 1481 1366.3 796.92 977.97 1572.5 0 1669.9 1 0 0 1 0 1 0 1 0 0 1 1 1 1 1 2 0 2 4691200 22152 4661 20749 41740;41741 33555;33556 33555 2 9606 Homo sapiens -0.09235887830732281 QVPNESFFNFFNPLK Unmodified 1826.8992 0.89917033 717 Q99733-2;Q99733;B4DS05;B7ZB83;B7ZAK9;A0A024RCC9;C9JZI7;A0A994J3W0;B7ZAC7;H0YCI4 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 0 0 0 3.5 0.5 1 1 65.272 65.294 3 5.7009E-14 20516 20230619_1883_Aki_TMTPro18x_K_F4 175.15 158.07 76833 66691 74668 76164 58989 77998 70599 72885 75991 82401 94140 81610 102000 82357 78137 95647 89937 94408 71056 61128 75812 76186 62932 78603 70740 75074 77849 82744 95966 82985 102680 85657 80625 95786 85968 89666 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151480000 22153 717 20750 41742;41743 33557 33557 1 9606 Homo sapiens 0.018796710148990314 QVPVDVVEMK Unmodified 1142.6005 0.60054547 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q59FS8 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 5.5 0.5 1 1 54.671 54.743 3 0.0003431 15733 20230619_1885_Aki_TMTPro18x_K_F5 110.66 94.03 72069 55148 67321 68244 65152 81724 77983 76365 89671 84348 82585 72588 97824 73171 76707 97338 88978 85603 66577 50612 68772 68026 68288 81467 78244 78583 90419 84486 85647 74315 98294 76781 79161 96709 84991 81443 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235390000 22154 487 20751 41744;41745 33558 33558 1 9606 Homo sapiens 0.034949215685401214 QVPVGPDGLPLLDGGPPLGPFADGALDR Unmodified 2739.4232 0.42318003 2756 C9JJX6;E9PDC3;O00192-2;O00192;B9EH95;Q05BN6 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome yes no 0 0 0 6 0 1 65.446 65.489 3 7.1448E-15 20543 20230619_1886_Aki_TMTPro18x_K_F6 143.54 127.42 5140.5 4399.7 4130.8 3695.1 4241.1 5318.6 6308.9 5135.8 6505.4 5142.3 5060 5805.6 6933.5 6536.6 4960.3 6236.7 6855.3 6403.4 4746.9 4023 4281.9 3816.7 4458 5252.6 6241.3 5260.8 6555.2 5221.9 5345.9 5887.4 6930.1 6699.8 5189.7 6278.9 6537.6 6081.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8265100 22155 2756 20752 41746 33559 33559 1 9606 Homo sapiens 0.12304537078489375 QVQEEISR Unmodified 987.49852 0.49852324 1805 A0A8Q3WLQ2;B4E0K0;Q5JRG1;H7BYF2;A0A8Q3WKK3;A0A8Q3WKL7;A0A8Q3WKK5;B3KW23;A0A8Q3WKQ7;Q9BVL2-2;Q9BVL2-3;Q9BVL2 NUPL1 Nucleoporin p58/p45 yes no 0 0 0 2 0 1 35.103 35.16 2 0.0044646 7738 20230619_1881_Aki_TMTPro18x_K_F2 116.37 16.354 33460 18741 37653 38403 53635 57748 41142 51685 45659 35992 53879 63573 49114 42540 48725 28521 61014 59698 30910 17338 38140 37382 54092 56744 42387 52768 46545 38047 54753 62511 50268 43857 50113 30701 58249 56376 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24603000 22156 1805 20753 41747 33560 33560 1 9606 Homo sapiens 0.004273915411545204 QVQHEESTEGEADHSGYAGELGFR Unmodified 2632.1426 0.14260109 4010 Q541A5;Q92890;Q92890-1;B7Z9N3;B4E3I3;Q92890-3;C9JNP9 ufd1;UFD1L Ubiquitin fusion degradation protein 1 homolog yes no 0 0 0 2 0 1 41.253 41.329 4 6.321E-63 10415 20230619_1881_Aki_TMTPro18x_K_F2 267.81 265.7 41625 43436 42009 42740 46405 49747 42021 41512 44991 53946 41501 45948 59490 39199 45643 58155 68070 61061 38559 39738 42705 43335 47723 49620 42730 43306 45630 53598 43558 46765 59440 41731 47956 58251 64864 57991 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113630000 22157 4010 20754 41748 33561 33561 1 9606 Homo sapiens -0.10818450650094746 QVQPEGPYR Unmodified 1072.5302 0.53015772 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 3.5 0.5 1 1 35.958 36.011 2 0.00011683 7900 20230619_1883_Aki_TMTPro18x_K_F4 152.89 108.19 262880 203090 222140 212540 197070 205930 214930 212930 267370 316540 352370 318960 345370 279130 257310 387190 381400 297840 242680 186090 228560 213960 207270 209080 217450 219830 272950 314350 356840 322570 348500 294870 270740 381990 363140 284140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1320900000 22158 3606 20755 41749;41750 33562;33563 33563 2 9606 Homo sapiens -0.003206157049362446 QVQPQVQPQAHSQGPR Unmodified 1783.9078 0.90777795 503 H0Y5D5;A0A024R885;B7Z3U7;F5H2X7;Q9ULV3-5;Q9ULV3-2;Q9ULV3;Q96KB7;Q9BTG3;Q5SYW2 CIZ1 Cip1-interacting zinc finger protein yes no 0 0 0 7.5 0.5 1 1 30.971 31.025 3 9.802E-06 5719 20230619_1887_Aki_TMTPro18x_K_F7 103.39 101.99 2826.4 4233.2 2420.8 3062.6 6729.6 5930.8 6637.3 5537.7 5953.3 5410.3 7093.7 7177.1 5669 4272.9 5034.4 5623.3 5909.8 7076.5 2595.7 3861.1 2562.8 3230.5 6631.6 5778.5 6668 5680.4 6144.9 5526.6 7162.1 7106.9 5796.7 4578.1 5182.7 5708.2 5654.1 6701.6 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29859000 22159 503 20756 41751;41752 33564;33565 33564 2 9606 Homo sapiens 0.047180377040831445 QVQPQVQPQAHSQPPR Unmodified 1823.9391 0.93907808 503 H0Y5D5;A0A024R885;B7Z3U7;F5H2X7;Q9ULV3-5;Q9ULV3-2;Q9ULV3 CIZ1 Cip1-interacting zinc finger protein yes no 0 0 0 7.5 0.5 1 1 31.855 31.904 3 1.7173E-14 6080 20230619_1887_Aki_TMTPro18x_K_F7 176.4 156.84 5071.1 4172.7 5078.8 5839.1 5629.8 6009.5 6099.6 5094.2 5808.9 4693.1 7700 6080.8 6381.3 6156.5 6568.1 5421.7 8470.5 8420.8 4689.3 3833.4 5171.6 5759 5812.8 6042.3 6113.6 5262.8 5999.4 4810.8 7743.5 6120.6 6569.3 6310.4 6773.9 5631.4 8085.8 7966.5 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 16180000 22160 503 20757 41753;41754 33566;33567 33566 2 9606 Homo sapiens 0.06006610738177187 QVQQLLGK Unmodified 912.53927 0.53926584 4730 Q9Y3T9;B3KNC3;Q9H9J5;Q8NAK7;B4DY21 NOC2L Nucleolar complex protein 2 homolog yes no 0 0 0 2.67 0.471 1 2 51.345 51.407 2;3 5.7318E-05 14759 20230619_1882_Aki_TMTPro18x_K_F3 186.43 130.71 101730 79056 96548 112700 109490 126530 117960 112250 145250 142860 133080 139120 143630 109200 122640 149700 154200 137860 93996 72659 98815 111170 113020 126530 119260 116500 146000 142640 137590 140350 145210 115820 126960 149040 147120 131130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199610000 22161 4730 20758 41755;41756;41757 33568;33569 33569 2 9606 Homo sapiens 0.07949777651424483 QVQSLMVHQR Oxidation (M) 1240.6346 0.63463956 156 Q969G3;A0A2U3TZQ7;B4DGM3;A0A2R8Y855;A0A2R8Y4T4;A0A2R8Y7I9;A0A2R8Y7U4;J3QKS7;A0A2R8Y765;A0A024R1S7;Q969G3-5;Q969G3-6;Q969G3-3;Q969G3-2;Q969G3-4;J3QR61 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 0 1 0 8 0 1 32.506 32.506 3 0.0022627 6558 20230619_1888_Aki_TMTPro18x_K_F8 77.744 29.63 10662 6473.1 9549.6 12273 14469 15775 9797 12887 13747 10077 12854 11551 11018 10798 11998 8215 11961 11393 9834.7 5978.7 9880.6 11946 14525 15608 10279 13281 13735 10388 13141 11635 11359 11025 12160 8489.5 11441 10790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14482000 22162 156 20759 41758 33570 33570 87 1 9606 Homo sapiens 0.023947627801362614 QVQSLTCEVDALK Unmodified 1489.7446 0.74464352 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 0 0 5 0 1 58.039 58.095 2 3.4054000000000003E-45 17094 20230619_1885_Aki_TMTPro18x_K_F5 360.54 279.75 242320 203740 217830 190160 372840 464500 348110 330440 375810 401550 356610 368420 427810 345090 361640 430920 365600 383980 223920 186460 225620 196830 374810 445730 353060 348370 380970 401120 369980 374690 431070 361340 369520 428860 349890 365130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 435100000 22163 3414 20760 41759 33571;33572 33571 2 9606 Homo sapiens 0.01936098537998987 QVQSQAHGLQMR Oxidation (M) 1397.6834 0.68338067 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 1 0 8 0 1 28.868 28.894 3 0.034393 5260 20230619_1888_Aki_TMTPro18x_K_F8 46.358 37.537 7922.1 3392 7813.9 7169.2 12897 11427 7419.6 15045 8274.9 5160.4 8913.3 12224 8144.1 9759.6 11733 6775.7 10687 9609.8 7302.7 3145 8012.8 6985.5 12827 11309 7848 14829 8398.6 5951.9 9112.3 12001 8525 9974.8 11781 7034.9 10228 9101.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3606400 22164 1432 20761 41760 33573 33573 914 1 9606 Homo sapiens 0.000446313492147965 QVQVALETAQR Unmodified 1241.6728 0.67279921 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 0 6 0 1 44.418 44.507 3 6.0742E-05 11466 20230619_1886_Aki_TMTPro18x_K_F6 101.45 59.336 107760 83958 103380 97121 128700 126850 123550 114180 159770 110250 124620 107970 132570 105480 110740 121770 125730 119360 99581 76995 105710 97426 131490 125780 125930 117420 159160 111700 129730 109720 133990 109780 113880 121940 120110 113420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27945000 22165 3921 20762 41761 33574;33575 33574 2 9606 Homo sapiens 0.06162971966432451 QVRPVTEK Unmodified 955.54508 0.5450795 3566 P38606-2;P38606;A0A994J738;C9JVW8 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 1 7.5 0.5 1 1 33.68 33.719 3 0.013901 6967 20230619_1888_Aki_TMTPro18x_K_F8 74.464 15.484 103100 48474 147720 148800 184220 183980 141200 184730 154610 114840 213280 250210 168600 177020 214800 73179 213030 208930 95424 45262 146860 142290 187050 183200 145500 186740 158810 123880 214440 245100 175860 179470 216710 83309 203810 197020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145740000 22166 3566 20763 41762;41763 33576 33576 1 9606 Homo sapiens 0.0655287616308442 QVSDDLTER Unmodified 1061.4989 0.49891717 2035 Q6FHP5;A8K401;P35232;Q6PUJ7;Q53FV0;C9JZ20;C9JW96;E7ESE2;E9PCW0 PHB;HEL-S-54e Prohibitin yes no 0 0 0 1.5 0.5 1 1 38.179 38.211 2 1.0102E-11 9259 20230619_1880_Aki_TMTPro18x_K_F1 234.81 164.12 304080 208760 273920 283150 389170 384800 385190 371760 504120 334230 409990 425140 462650 354050 387960 320430 498310 396080 280660 191860 282550 281140 394900 381120 392030 379650 502510 342910 427410 424920 466820 366020 401450 327070 475000 375780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1676499999.9999998 22167 2035 20764 41764;41765 33577 33577 1 9606 Homo sapiens -0.02937233529655714 QVSDLISVLR Unmodified 1128.6503 0.65027285 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 2 0 1 61.512 61.523 2 1.7155E-09 19238 20230619_1881_Aki_TMTPro18x_K_F2 204.34 121.91 767550 644360 689630 794130 657870 817230 786490 779740 818930 845130 796480 675490 858090 662660 715250 922910 781390 759410 709250 591120 707320 789890 690120 823580 786670 800960 831930 845450 820060 693730 866600 697990 734640 913490 746830 723110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 286090000 22168 3137 20765 41766 33578 33578 1 9606 Homo sapiens 0.09109372568855179 QVSGQLLEER Unmodified 1157.6041 0.60405094 1944 A4D218;Q9Y6D9;Q9Y6D9-4;Q9Y6D9-3 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes no 0 0 0 3 0 1 43.407 43.477 2 0.00068235 11137 20230619_1882_Aki_TMTPro18x_K_F3 133.89 94.675 98086 72911 84936 100540 97222 112760 98949 95655 120150 110740 130720 130900 125870 106220 116520 134760 137570 128390 90545 66998 87658 99367 100170 112670 100330 99340 121580 111750 133400 131180 128180 111860 119910 134560 131360 122040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42840000 22169 1944 20766 41767 33579;33580 33579 2 9606 Homo sapiens 0.03155307666770568 QVSIEEGER Unmodified 1045.504 0.50400254 342 P20340;A0A024R5J5;P20340-2;A0A024R5H8;Q6FGX3;Q53ET8;P20340-4;B7Z5Z9;Q53S08 RAB6A;RAB6C Ras-related protein Rab-6A yes no 0 0 0 1 0 1 36.894 36.894 2 0.0029882 8760 20230619_1880_Aki_TMTPro18x_K_F1 114.51 84.704 49648 42176 52310 54725 59509 55964 60791 55874 72980 38743 42993 35881 43808 29578 61312 24138 36035 30933 45940 38710 53031 54251 61204 56515 61565 56656 72351 40049 45554 36347 45445 30483 60432 24852 34687 29327 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44214000 22170 342 20767 41768 33581 33581 1 9606 Homo sapiens -0.01692929667046883 QVSIEEGERK Unmodified 1173.599 0.59896556 342 P20340;A0A024R5J5;P20340-2;A0A024R5H8;Q6FGX3;Q53ET8;P20340-4;B7Z5Z9;Q53S08 RAB6A;RAB6C Ras-related protein Rab-6A yes no 0 0 1 3.5 0.5 1 1 37.222 37.271 3 0.0034134 8461 20230619_1882_Aki_TMTPro18x_K_F3 77.74 63.931 79204 80195 106730 86833 125870 96385 116900 89474 95786 92747 103730 67738 94843 61429 141610 52329 86827 70464 73557 73434 106250 87352 128500 96740 117720 92040 99113 92805 105550 69734 99090 63248 139640 54043 83492 66795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124530000 22171 342 20768 41769;41770 33582 33582 1 9606 Homo sapiens 0.01911003804139 QVSTEEAQAWCR Unmodified 1463.6463 0.64632646 695 A0A024RBV5;P51151 RAB9A Ras-related protein Rab-9A yes no 0 0 0 4 0 1 43.563 43.607 2 0.0048072 11126 20230619_1883_Aki_TMTPro18x_K_F4 84.507 66.776 13005 10830 16716 14287 15114 16961 18348 19189 18266 18242 22199 21881 23836 15683 19055 20453 21883 22992 12055 9942.7 16636 14188 15899 16995 18321 19418 18765 18587 22657 21843 24015 16656 19624 20613 20918 21807 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11675000 22172 695 20769 41771 33583 33583 1 9606 Homo sapiens -0.06695084987177324 QVTCVAWVR Unmodified 1117.5702 0.57024839 674 B4DNL1;Q9BV37;Q53FW9;A0A024RBH5;Q13610;Q86X79;Q05BL3;Q6PKI5;Q6PIN4;Q13610-2 PWP1 Periodic tryptophan protein 1 homolog yes no 0 0 0 3 0 1 48.071 48.15 2 0.016753 13330 20230619_1882_Aki_TMTPro18x_K_F3 85.716 73.089 104940 108920 113890 118630 120260 134480 119270 122020 127980 132430 125850 101440 117810 100530 153720 120300 122500 111380 97264 99735 115070 119250 124360 134530 120630 125770 129870 132350 128800 104430 122170 104800 153770 120200 117430 105930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58694000 22173 674 20770 41772 33584 33584 1 9606 Homo sapiens 0.0161660769399532 QVTGQPQNASFVK Unmodified 1402.7205 0.72047768 955 A0A0A0MSK5;Q5JTV8;Q5JTV8-3;J3KN66 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 0 0 0 1 0 1 45.189 45.189 3 6.4015E-08 12365 20230619_1880_Aki_TMTPro18x_K_F1 117.63 95.432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22174 955 20771 41773 33585 33585 1 9606 Homo sapiens 0.03522626166613918 QVTGVTR Unmodified 759.4239 0.42390173 648 F8VZJ2;A0A7I2V2K5;A0A024RB41;H0YHX9;A0A7I2V473;Q13765;E9PAV3-2;E9PAV3;F8W0W4;F8VNW4;F8VZ58 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 0 0 5.5 1.12 1 1 1 1 31.125 31.193 2 0.011243 6215 20230619_1886_Aki_TMTPro18x_K_F6 116.9 49.91 62466 24516 77190 75760 110570 105900 71318 104780 76740 46476 91147 100720 62487 69329 83959 29237 112780 79634 57686 22924 77640 72599 111000 104680 74489 105470 78300 51733 91685 98658 65840 70386 86260 33043 107400 75224 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109100000 22175 648 20772 41774;41775;41776;41777 33586;33587 33586 2 9606 Homo sapiens 0.03456673520418008 QVTITGSAASISLAQYLINAR Unmodified 2176.1852 0.18518159 3929 Q15365;Q53SS8 PCBP1 Poly(rC)-binding protein 1 yes no 0 0 0 6 0 1 64.015 64.061 3 9.945199999999999E-19 19939 20230619_1886_Aki_TMTPro18x_K_F6 161.51 148.09 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22176 3929 20773 41778 33588 33588 1 9606 Homo sapiens 0.14413641006740363 QVTPDGESDEVGVIPSK Unmodified 1755.8527 0.85267365 990 A0A0C4DFT3;A0A590UKA8;A0A590UJ18;Q12959-5;Q12959-3;A0A590UJD9;A0A590UJ68;Q12959-6;A0A590UJS9;A0A590UJC5;Q12959-7;Q12959-2;Q12959;A0A590UJR5;A0A590UJ08;Q12959-4;Q12959-9;A0A590UJ29;Q12959-8;C9JUA9;A0A590UJR4;A0A590UJX2;A0A590UJ64;E7EQD7;A0A590UK81;Q59FC4;A0A590UK48;B4DF78;A0A590UJ81;A0A590UJ25;A0A590UJL2;A0A590UK70;A0A590UK02 DLG1 Disks large homolog 1 yes no 0 0 0 3 0 1 51.439 51.504 3 1.8159E-06 14805 20230619_1882_Aki_TMTPro18x_K_F3 111.06 98.919 43538 35987 42423 43545 50604 53682 47194 49302 56725 43701 40134 43581 47189 34191 46228 43857 44902 44185 40253 33009 43313 43491 51822 53419 48076 50508 56580 44482 42301 43920 47857 36120 46936 43945 42970 41967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51376000 22177 990 20774 41779 33589 33589 1 9606 Homo sapiens 0.00498141602247415 QVTQEEGQQLAR Unmodified 1385.6899 0.68990583 2927 E9PK85;P62070-2;P62070-3;P62070;P62070-4 RRAS2 Ras-related protein R-Ras2 yes no 0 0 0 2.67 0.471 1 2 36.602 36.659 2;3 4.6334E-13 8337 20230619_1881_Aki_TMTPro18x_K_F2 218.43 192.69 46253 33368 41785 38391 41183 47503 45502 46938 56827 58402 68302 64710 70692 55098 53074 61482 76682 65433 42703 30609 42790 38500 42986 47333 45998 48281 57706 58597 69589 65087 71216 57517 55621 61882 73063 62148 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37287000 22178 2927 20775 41780;41781;41782 33590;33591;33592 33590 3 9606 Homo sapiens 0.012488477816077648 QVTQLAIDTEER Unmodified 1401.71 0.70997257 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;C9J2Z7;C9K073 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 2.5 0.5 1 1 47.532 47.61 2 2.8198E-17 13329 20230619_1881_Aki_TMTPro18x_K_F2 220.29 164.39 154350 114660 125460 149750 135510 140310 139560 149230 189750 192920 171570 176820 230020 162780 123830 260330 221450 224680 142420 105300 130130 148200 140170 142830 142050 152980 189910 192140 179320 179890 227750 173650 133930 257590 210960 213760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 237250000 22179 1676;2901 20776 41783;41784 33593;33594 33593 2 9606 Homo sapiens 0.025185987215763816 QVTSNSLSGTQEDGLDDPRLEK Unmodified 2388.1405 0.14047583 2239 B2R6S9;P30533;A8K8F6;A0A3B3IRQ7 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes no 0 0 1 3 0 1 48.466 48.545 3 4.7827E-05 13508 20230619_1882_Aki_TMTPro18x_K_F3 84.689 72.256 27074 21188 31154 23505 24466 25414 26758 26926 32766 34156 32117 33487 35082 26022 32248 40348 37737 36587 25059 19423 31155 23602 25989 25603 27053 27591 33034 34103 33121 33777 35558 27859 33189 40078 36045 34794 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33505000 22180 2239 20777 41785 33595 33595 1 9606 Homo sapiens 0.0019312061203891062 QVVESAYEVIK Unmodified 1263.6711 0.67106787 3370 V9HWB9;P00338;P00338-3;B4DJI1;P00338-4 HEL-S-133P;LDHA L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 6 0 1 56.518 56.593 3 0.00013053 16693 20230619_1886_Aki_TMTPro18x_K_F6 117.2 72.435 40018 31755 40114 43298 39457 42989 45827 38980 51352 44463 44359 42352 51839 45098 48000 52736 49574 53671 36998 29168 40752 42762 41202 43400 45992 40276 51715 44610 46163 43208 52498 46837 48991 52912 47445 50952 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98888000 22181 3370 20778 41786 33596 33596 1 9606 Homo sapiens 0.049779181578287535 QVVIGGR Unmodified 727.43407 0.43407249 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 7.5 0.5 1 1 36.297 36.324 2 0.076151 8035 20230619_1888_Aki_TMTPro18x_K_F8 74.415 31.642 72587 41408 69162 72553 113810 144700 89660 87323 150960 55751 64536 74565 68587 61404 67225 42114 80320 66948 66966 38213 71260 71541 114320 139400 93583 92300 146580 58872 70515 74332 69885 62766 68953 44118 76631 63373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96821000 22182 128 20779 41787;41788 33597 33597 1 9606 Homo sapiens 0.05945281245669776 QVVILSQDSFYR Unmodified 1453.7565 0.75652884 1357 A0A2R8Y653;Q9BZX2;B4DGD3 UCK2 Uridine-cytidine kinase 2 yes no 0 0 0 4.5 3.5 1 1 56.696 56.725 2 2.6073E-24 17151 20230619_1880_Aki_TMTPro18x_K_F1 309.21 247.43 114920 88116 100820 110470 69365 91176 90397 87007 99707 127840 109910 85114 124640 95874 88387 139980 113600 112080 106120 80878 103180 109470 75264 93553 90282 90302 101610 125690 112720 88827 124960 100930 92195 138230 108440 106750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64093000 22183 1357 20780 41789;41790 33598;33599 33598 2 9606 Homo sapiens 0.04780083343507613 QVVNFGPGPAK Unmodified 1112.5978 0.59784335 183 A0A024R222;B4DHQ3;Q9Y617;A0A024R280;Q9Y617-2;A9LS35 PSAT1 Phosphoserine aminotransferase yes no 0 0 0 2 0 1 49.002 49.067 2 4.6179E-12 13982 20230619_1881_Aki_TMTPro18x_K_F2 207.29 143.87 128550 103080 124190 95462 108340 99122 77943 80124 83480 138980 151040 202570 151690 133050 171950 185330 165550 197010 118810 94341 126020 97222 112840 99689 80723 84792 87685 139090 152230 200230 155750 142230 174230 186010 158670 186880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90560000 22184 183 20781 41791 33600 33600 1 9606 Homo sapiens 0.04604834225892773 QVVNIPSFIVR Unmodified 1270.7398 0.73975656 299 A0A024R4M0;P46781;A5D904 RPS9 40S ribosomal protein S9 yes no 0 0 0 4.5 0.5 1 1 60.95 60.976 2 3.1031000000000003E-30 18276 20230619_1885_Aki_TMTPro18x_K_F5 268.69 220.82 450760 351830 399960 410810 364430 445230 428130 433750 484610 319390 271550 234310 296590 250820 349480 377620 338120 288980 416300 322680 410090 410600 383580 447260 429710 440850 481610 326660 289690 242740 304550 264850 353960 372400 323280 275600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3089099999.9999995 22185 299 20782 41792;41793 33601;33602 33602 2 9606 Homo sapiens 0.11521627248203004 QVVQGLLSETYLEAHR Unmodified 1841.9636 0.9635615 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;P33993-2 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 7.5 0.5 1 1 58.329 58.378 3 1.7582E-42 17107 20230619_1887_Aki_TMTPro18x_K_F7 268.5 249.46 106650 73145 93459 116440 88917 111250 99706 98129 113350 110820 122260 108560 119390 112270 122870 135050 122040 124550 98413 67353 96115 113870 93160 112510 100360 101550 115040 111290 124830 110540 122170 116830 124910 134730 116790 118400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1867899999.9999998 22186 1091 20783 41794;41795 33603;33604 33603 2 9606 Homo sapiens 0.07625826101070743 QVYDGFSFIGNTGPYEVSK Unmodified 2106.9898 0.98983583 268 A0A024R3V8;Q99598 TSNAX Translin-associated protein X yes no 0 0 0 8 0 1 62.6 62.625 3 6.241E-11 18900 20230619_1888_Aki_TMTPro18x_K_F8 141.86 127.43 99481 81997 96338 115160 110100 125410 120970 97524 125070 158120 146060 160270 155690 137680 137310 162810 159650 184260 91967 75332 98462 113620 113580 125380 121420 103270 128210 156600 149390 161730 157770 144120 141340 164330 152700 174690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 328640000 22187 268 20784 41796 33605 33605 1 9606 Homo sapiens -0.01937949518151072 QVYGLNFGSK Unmodified 1111.5662 0.56620887 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A075B6E5;A0A0U1RQP7 ENAH Protein enabled homolog yes no 0 0 0 3 0 2 54.553 54.6 3 0.00012347 16173 20230619_1882_Aki_TMTPro18x_K_F3 125.7 87.612 157960 138460 153230 145450 156850 175190 154890 161410 178720 207890 195580 203720 233130 166260 169600 258640 251680 256310 146090 126810 156040 146800 162630 174650 157110 167030 181630 207420 201500 205790 233590 177780 178600 257970 240040 243450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 474760000 22188 918 20785 41797;41798 33606;33607 33606 2 9606 Homo sapiens 0.014888414719507637 QWAGLVEK Unmodified 929.49707 0.49706667 2790 CON__Q03247;A0A0S2Z3V0;A0A346DBY2;J9ZVQ3;A0A0S2Z3D5;P02649;A0A0S2Z3J5;A0A0S2Z3B1 APOE Apolipoprotein E yes no 0 0 0 8 0 1 53.982 54.053 2 0.0035405 15293 20230619_1888_Aki_TMTPro18x_K_F8 106.6 39.567 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22189 2790 20786 41799 33608 33608 1 9606 Homo sapiens 0.02949802243040267 QWCNCAFLESSAK Unmodified 1599.681 0.68099741 2153 A8KAH9;P62834 RAP1A Ras-related protein Rap-1A yes no 0 0 0 4.5 3.5 1 1 55.523 55.554 3 4.0744E-05 15956 20230619_1888_Aki_TMTPro18x_K_F8 113.99 101.11 96439 91031 105300 102080 93577 129030 120230 122040 138320 129170 122850 116230 151140 111170 130480 144320 135700 146340 89328 83400 106080 102580 99030 128220 120250 125300 139290 129800 127970 118480 152260 116700 133410 144560 129860 138940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 295960000 22190 2153 20787 41800;41801 33609;33610 33610 2 9606 Homo sapiens -0.09485585170705235 QWECLTSECR Unmodified 1367.5598 0.55981964 1731 A0A804HJA4;J3KN16;Q5VYK3;B3KXF2 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 4 0 1 47.59 47.63 2 5.6637E-05 12927 20230619_1883_Aki_TMTPro18x_K_F4 145.25 133.2 51312 42281 46520 49345 48313 57637 60102 51271 62687 72916 72147 68699 80693 64914 53937 78984 93116 80143 47412 38770 47713 49366 50393 57509 59978 53413 64147 72401 73895 69815 80825 67859 57610 79134 88624 76156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32781000 22191 1731 20788 41802 33611 33611 1 9606 Homo sapiens -0.10925787813403076 QWELLLEK Unmodified 1057.5808 0.5807963 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;B4DGT1;B4DTV8;A0A5F9ZHC3;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 7 0 1 62.684 62.719 3 0.0027778 19043 20230619_1887_Aki_TMTPro18x_K_F7 100.57 68.56 188350 141990 172640 169770 137400 192030 190240 181600 210680 226170 204290 210720 232820 185920 197960 259380 226520 249100 173950 130280 176190 169510 147290 192170 189400 187430 213350 225690 211190 213810 235000 196550 203840 258700 216610 236630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309900000 22192 1022;3868 20789 41803 33612 33612 1 9606 Homo sapiens 0.054309136201027286 QWEYCGQPK Unmodified 1194.5128 0.51279309 3131 Q9Y3E5;J3KQ48;Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes no 0 0 0 6.5 0.5 1 1 46.122 46.208 2 0.0056416 11802 20230619_1887_Aki_TMTPro18x_K_F7 95.502 75.172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22193 3131 20790 41804;41805 33613;33614 33614 2 9606 Homo sapiens -0.07668279302220071 QWGHNELDEPFYTNPIMYK Unmodified 2381.0787 0.078667612 4364 Q96HY7;H7C1J3 DHTKD1 Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial yes no 0 0 0 7 0 1 61.262 61.301 3 0.013085 18339 20230619_1887_Aki_TMTPro18x_K_F7 54.288 45.469 15732 15075 18141 15658 16868 22829 16584 16351 23967 20658 20891 23787 22158 18457 21821 22927 23538 24362 14581 13802 18197 15867 17655 22388 16971 17265 23871 20756 21654 23814 22559 19453 22296 23045 22510 23121 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50235000 22194 4364 20791 41806 33615 33615 1 9606 Homo sapiens -0.05662857550078115 QWGTTCK Unmodified 879.39089 0.39088704 3250 O43252;Q05BW9;Q4W5F0 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 8 0 1 41.501 41.498 2 0.059121 10087 20230619_1888_Aki_TMTPro18x_K_F8 75.738 36.029 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22195 3250 20792 41807 33616 33616 1 9606 Homo sapiens -0.053632765939369165 QWGWTQGR Unmodified 1017.4781 0.47806257 188 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;P18621-3;J3KRB3;A0A087WWH0;J3QS96;J3QLC8;A0A0A0MRF8;P18621-2;A0A087WY81 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 yes no 0 0 0 2.5 0.5 1 1 46.82 46.896 2 0.0060379 12707 20230619_1882_Aki_TMTPro18x_K_F3 111.74 78.476 421520 375840 418590 352000 427650 559180 481890 463290 529370 412790 254420 271110 434500 296450 305530 375990 420470 360710 389970 343880 425340 360520 445640 547480 484020 478310 525870 415950 281950 282450 431380 309670 319620 375480 400780 342980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 909770000 22196 188 20793 41808;41809 33617 33617 1 9606 Homo sapiens -0.029977343280052082 QWHNDCFNCK Unmodified 1407.5448 0.54483828 3098 Q53T40;I0CE67;Q6I9R8;Q2TSB7;Q2XQU9;Q14192 FHL2;AAG11 Four and a half LIM domains protein 2 yes no 0 0 0 7 0 1 41.187 41.258 3 6.4088E-05 9766 20230619_1887_Aki_TMTPro18x_K_F7 136.5 123.09 42899 25081 49776 50154 92555 94877 63872 62517 82116 66945 69384 65042 74576 59093 56566 68424 77525 73450 39650 23189 50629 49097 91938 91769 66598 66182 82129 67433 71958 65930 75087 61681 59055 68857 73944 69725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51033000 22197 3098 20794 41810 33618 33618 1 9606 Homo sapiens -0.14263234890722742 QWKPQLGFNR Unmodified 1272.6727 0.67273963 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 0 1 6 0 1 49.213 49.291 3 0.059146 13622 20230619_1886_Aki_TMTPro18x_K_F6 47.894 30.568 124060 105470 102970 96395 112200 147990 119290 128850 186530 38584 33819 43691 41381 38009 48769 60398 59325 49748 114580 96500 106480 98866 116390 145260 121840 130480 179650 44293 42296 44028 42473 40543 50104 59700 56594 47399 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80938000 22198 2350 20795 41811 33619 33619 1 9606 Homo sapiens 0.047310167571367856 QWLMTEALVNNPK Unmodified 1542.7864 0.78644876 3520 P29084;E5RH41 GTF2E2 Transcription initiation factor IIE subunit beta yes no 0 0 0 1.5 0.5 1 1 61.81 61.815 3 0.0013719 19431 20230619_1881_Aki_TMTPro18x_K_F2 80.469 66.806 33920 27995 38066 36816 32180 39566 43533 33306 35796 38390 44060 38679 41582 34106 40725 44701 44679 44994 31399 25701 38239 36489 34185 39646 42991 34632 37230 38535 44684 39131 42467 35900 41668 44754 42713 42732 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46195000 22199 3520 20796 41812;41813 33620 33620 1 9606 Homo sapiens 0.03676699017205465 QWLQEIDR Unmodified 1086.5458 0.54580778 3725;4495 Q5U0I6;P62820;B7Z8M7;E7END7;P62820-2;Q92927;Q9H0U4;E9PLD0;Q6FIG4;Q92928 RAB1A;rab1b;RAB1B;RAB1C Ras-related protein Rab-1A;Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C no no 0 0 0 4.5 0.5 1 1 54.025 54.04 2 6.6235E-05 15464 20230619_1885_Aki_TMTPro18x_K_F5 133.05 49.788 2357200 1952900 2171700 2141600 1949900 2663600 2429200 2360300 2937700 2255400 2096200 2168400 2424100 1849300 2295900 2552900 2530500 2546000 2178400 1789600 2218700 2154900 2061000 2646000 2436800 2429300 2928900 2283900 2205500 2195000 2456800 1956600 2351200 2552800 2419000 2418200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 727560000 22200 3725;4495 20797 41814;41815 33621;33622 33622 2 9606 Homo sapiens 0.0059967081210743345 QWLQEVK Unmodified 929.49707 0.49706667 415 B3KUZ8;A0A024R6W0;P00505;A8K482;P00505-2 GOT2 Aspartate aminotransferase;Aspartate aminotransferase, mitochondrial yes no 0 0 0 7 0 1 53.57 53.637 2 0.010071 15184 20230619_1887_Aki_TMTPro18x_K_F7 105.25 49.238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22201 415 20798 41816 33623 33623 1 9606 Homo sapiens 0.02949802243040267 QWNNCAFLESSAK Unmodified 1553.6933 0.69327665 655 P61224;P61224-3;A0A024RB87;F5H7Y6;E7ESV4;A6NIZ1;P61224-4;P61224-2;B7ZB78;F5GZG1;F5H823;B7ZAY2 RAP1B Ras-related protein Rap-1b;Ras-related protein Rap-1b-like protein yes no 0 0 0 4.5 3.5 1 1 54.679 54.712 3 1.8986E-07 15573 20230619_1888_Aki_TMTPro18x_K_F8 145.29 125.72 206990 183400 230990 235370 193520 254980 220430 229720 256110 295200 270120 278240 324950 253890 262830 305150 320210 347270 191680 168280 232150 233670 205000 255660 221950 238150 259750 294270 278890 282330 326840 265630 271760 308030 306010 329290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 775640000 22202 655 20799 41817;41818 33624;33625 33625 2 9606 Homo sapiens -0.06142225436019544 QWNVNWEIK Unmodified 1215.6037 0.60365701 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8;H0YJB6 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 1.67 0.471 1 2 60.013 60.019 2;3 0.00012538 18629 20230619_1881_Aki_TMTPro18x_K_F2 100.25 53.784 33323 27061 31796 35280 29658 39944 33349 31933 38439 49843 41527 45054 51450 38170 34355 52607 49006 44315 30800 24842 32423 35001 31141 39836 33577 33657 39072 49255 42899 45700 51356 40382 36142 52115 46715 42196 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45296000 22203 385 20800 41819;41820;41821 33626;33627 33627 2 9606 Homo sapiens 0.00447932737552037 QWPELIPTLIESVK Unmodified 1651.9185 0.91850879 4665 Q9UI26;Q9UI26-2;F8WDV0;D6RCN7;D6RJB1 IPO11 Importin-11 yes no 0 0 0 2 0 1 66.079 66.086 3 0.0014139 21255 20230619_1881_Aki_TMTPro18x_K_F2 73.887 60.224 6397.6 5989.6 6982.4 6432.7 5707.7 5529 6446.8 8407.5 5709.5 7264.8 7529.5 7975 8830.7 7586.8 7832.5 11228 7576.5 9113.1 5925.5 5485.6 7020.2 6456.5 6038.4 5729.7 6445.8 8353.7 5938.9 7416.2 7700.9 8060 8923.1 8026.8 7988 11096 7262.2 8672.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10360000 22204 4665 20801 41822 33628 33628 1 9606 Homo sapiens 0.11862627305799833 QWQQHIQSEK Unmodified 1310.6367 0.63674805 149 A0A024R1N2;Q9UGR2 ZC3H7B Zinc finger CCCH domain-containing protein 7B yes no 0 0 0 7 0 1 39.461 39.526 3 0.00014731 9058 20230619_1887_Aki_TMTPro18x_K_F7 121.36 99.368 32047 22551 30726 26726 32173 32431 37446 34476 41852 39519 36755 35724 39832 28365 28830 40655 62088 35844 29597 20694 31321 26743 33424 32419 37576 35208 42192 39552 38065 36193 40041 30174 31396 40351 58902 34192 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17410000 22205 149 20802 41823 33629 33629 1 9606 Homo sapiens -0.0061448521039437765 QWYESHYALPLGR Unmodified 1618.7892 0.78922595 3707 Q5JR94;P62241;Q5JR95 RPS8 40S ribosomal protein S8 yes no 0 0 0 1.5 0.5 1 1 52.727 52.744 3 4.4423E-37 15619 20230619_1881_Aki_TMTPro18x_K_F2 234.87 211.98 411150 350090 418680 422090 376540 451090 464880 481310 492700 488280 393550 423630 531120 403790 399500 548680 501410 545900 380330 321080 424140 420880 397020 454570 464550 489690 496800 491080 414630 432370 531270 425160 415010 548390 479070 518370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1904199999.9999998 22206 3707 20803 41824;41825 33630;33631 33631 2 9606 Homo sapiens 0.00458290466372091 QYADVEGF Unmodified 927.39741 0.39741221 1865 P61978-3;A0A994J4E9;P61978-2;Q5EC54;A0A994J4S7;B4DFF1 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 2 0.816 1 1 1 56.473 56.492 2 6.5888E-05 17161 20230619_1881_Aki_TMTPro18x_K_F2 185.22 160.23 283420 235670 249400 279400 280670 332380 295650 325990 332730 353900 333570 348950 388840 307270 332500 432190 370660 379270 261830 216130 256860 279280 289750 331890 298470 334060 337180 355940 344720 353180 392300 324970 341760 429040 354330 360760 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1548099999.9999998 22207 1865 20804 41826;41827;41828 33632;33633;33634 33633 3 9606 Homo sapiens -0.06919060161567359 QYAGLDHELAFSR Unmodified 1505.7263 0.72629134 1911 A2A3U5;Q99720-3;Q99720;A0A7P0T9D5;A0A7P0TA12;B4DR71;A0A7P0Z4C2;Q99720-4 hCG_20471;SIGMAR1 Sigma non-opioid intracellular receptor 1 yes no 0 0 0 5.5 0.5 1 1 48.237 48.315 3 4.6074E-11 13014 20230619_1885_Aki_TMTPro18x_K_F5 179.46 168.19 151170 142800 174240 170420 179880 231060 196520 171540 300640 160780 165600 151780 182240 134610 165670 187820 191060 149880 140090 130910 175190 170610 187230 227600 200220 179130 294540 163190 176860 154050 184640 142280 170260 185710 182270 142910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212760000 22208 1911 20805 41829;41830 33635 33635 1 9606 Homo sapiens -0.006342753216813435 QYAGYDYSQQGR Unmodified 1434.6164 0.61640654 2429 B3KW34;Q969M3;Q969M3-3 YIPF5 Protein YIPF;Protein YIPF5 yes no 0 0 0 5.5 0.5 1 1 39.857 39.946 2 1.6643E-24 9494 20230619_1886_Aki_TMTPro18x_K_F6 265.01 261.67 52284 41527 49270 62367 71719 77341 68183 74041 80399 79027 95886 101560 106590 80139 72140 115870 113900 104420 48313 38187 50722 61421 72628 76970 69337 75981 81835 80273 98106 101410 106770 85267 76505 115080 108510 99333 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 101960000 22209 2429 20806 41831;41832 33636;33637 33637 2 9606 Homo sapiens -0.08351700660887218 QYDEALNK Unmodified 979.46108 0.4610751 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4 0 1 43.728 43.773 2 0.0016048 11188 20230619_1883_Aki_TMTPro18x_K_F4 153.08 112.97 49430 25550 48302 61782 60130 81121 59422 71112 87994 66831 91539 127510 112790 101940 73362 65033 153760 141790 45592 23719 49441 59567 61676 80211 60855 73216 88084 69657 94865 125630 112700 104100 79657 70274 146250 133910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47107000 22210 3758 20807 41833 33638 33638 1 9606 Homo sapiens -0.02947699724472841 QYDISDPQRPR Unmodified 1373.6688 0.66877646 3841 V9HWG1;Q13228-3;Q13228;Q13228-4;B4DPI7;Q13228-2;H0Y532 HEL-S-134P;SELENBP1 Selenium-binding protein 1 yes no 0 0 1 4.5 0.5 1 1 35.626 35.695 3 0.00028383 7844 20230619_1885_Aki_TMTPro18x_K_F5 110.44 83.136 39490 32019 42293 44560 51942 55696 61631 58161 65190 54153 63442 63504 69876 52376 60647 62629 66327 55116 36535 29415 42903 44111 53415 55517 61662 59138 66097 55237 65456 63686 70626 54946 62151 62357 63328 52470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106890000 22211 3841 20808 41834;41835 33639 33639 1 9606 Homo sapiens -0.003111175272579203 QYDSVECPFCDEVSK Unmodified 1861.7499 0.74986483 500 B5BU53;B2R9L6;A0A024R880;P50750;P50750-2;X6RE90 CDK9 Cyclin-dependent kinase 9 yes no 0 0 0 3 0 1 54.054 54.107 3 0.037266 16011 20230619_1882_Aki_TMTPro18x_K_F3 46.571 36.103 38511 33541 42210 42197 33865 40369 46000 43284 43563 99178 90577 94856 115220 88605 61554 116800 99553 118170 35653 30772 42453 41890 36156 41035 45647 45504 46638 97006 91752 96258 114200 93154 65946 116810 95013 112150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61420000 22212 500 20809 41836 33640 33640 1 9606 Homo sapiens -0.1465401045231829 QYEGGIFK Unmodified 940.46543 0.46543219 2076 A8K5J1;P11172;B5LY71;P11172-3;B5LY64;P11172-2;B5LY70 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase;Orotidine 5'-phosphate decarboxylase yes no 0 0 0 6.5 0.5 1 1 49.64 49.721 2 0.023675 13478 20230619_1887_Aki_TMTPro18x_K_F7 85.731 48.71 100550 86904 90295 76475 97473 121670 97890 96949 122810 72163 83322 80450 87445 65878 85006 92343 91864 88002 92933 79487 92616 78773 100870 119050 99431 100060 121960 74627 87516 80885 88971 69861 86900 92104 87802 83645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119810000 22213 2076 20810 41837;41838 33641 33641 1 9606 Homo sapiens -0.007181905109064246 QYEMGECTR Oxidation (M) 1188.454 0.45395758 3777 Q01081;B5BU08;Q01081-2;Q7Z780;Q01081-4;Q8WU68-3;Q8WU68 U2AF1;U2AF1L4 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit yes no 0 1 0 1.67 0.471 1 2 30.348 30.393 2 0.004083 5994 20230619_1880_Aki_TMTPro18x_K_F1 93.556 91.538 58203 41027 52559 56668 75120 69683 70936 64825 86662 70794 74378 71445 83187 59990 59917 84184 94629 81926 53729 37709 54215 56098 76058 69387 72209 66725 86885 71284 77224 72153 83487 63588 63379 84002 90117 77884 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 131720000 22214 3777 20811 41839;41840;41841 33642;33643;33644 33642 2466 3 9606 Homo sapiens -0.13273123658882469 QYEMGECTR Unmodified 1172.459 0.45904296 3777 Q01081;B5BU08;Q01081-2;Q7Z780;Q01081-4;Q8WU68-3;Q8WU68 U2AF1;U2AF1L4 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit yes no 0 0 0 2 0 1 35.917 35.974 2 8.5666E-05 8043 20230619_1881_Aki_TMTPro18x_K_F2 157.96 135.83 126340 100950 115050 119190 130080 162290 136970 135220 178360 166710 164590 165360 191460 157790 136540 205120 223060 190820 116720 92587 118090 119430 134360 160180 138960 140810 178850 166840 170620 167740 192020 165530 144940 204350 212360 181510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193460000 22215 3777 20811 41842 33645 33645 1 9606 Homo sapiens -0.120288197962509 QYEQQTYQVIPEVIK Unmodified 1864.9571 0.95707914 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;H7C3A0;C9JHP4;C9K0Q7;B4DEH4 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 0 6.5 0.5 1 1 59.273 59.328 3 2.8961E-05 17817 20230619_1886_Aki_TMTPro18x_K_F6 97.836 74.355 121020 106030 123950 119390 104760 136980 132760 131780 147040 184100 179520 193980 198660 152790 165650 242890 197380 210040 111980 97168 125390 119760 111250 137040 132740 136370 150460 183470 183570 195120 200480 163740 171220 240540 188640 199800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 713520000 22216 2176 20812 41843;41844 33646;33647 33646 2 9606 Homo sapiens 0.05919888149651342 QYESLPATHIR Unmodified 1313.6728 0.67279921 2897 E9PCS8;E7EQY4;E7EV10;Q9BTC8-2;Q9BTC8;F6RRE2;Q53RX8 MTA3;tmp_locus_6 Metastasis-associated protein MTA3 yes no 0 0 0 5.5 0.5 1 1 39.6 39.689 3 6.7172E-05 9365 20230619_1886_Aki_TMTPro18x_K_F6 125.97 98.489 30188 22047 30601 29808 34677 31744 36306 32883 41527 30773 28078 30801 36816 29461 36082 34728 31389 33661 27898 20256 31102 29494 35690 31991 36656 33469 41462 31237 29854 31222 37250 30721 36437 34762 30094 31975 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73814000 22217 2897 20813 41845;41846 33648 33648 1 9606 Homo sapiens 0.028509719664498334 QYFEEIQR Unmodified 1111.5298 0.52982336 4550 Q9HCD5;Q5JY17 NCOA5 Nuclear receptor coactivator 5 yes no 0 0 0 3.5 0.5 1 1 46.965 47.045 2 0.0069124 12627 20230619_1883_Aki_TMTPro18x_K_F4 110.41 80.598 60313 49545 56865 69212 74293 77072 71743 74649 81895 75835 76823 74529 85190 66774 70370 84953 84001 84410 55745 45516 58386 68350 75697 77278 72795 76450 82670 76548 79399 75488 85950 70128 72650 85003 80243 80178 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45698000 22218 4550 20814 41847;41848 33649;33650 33650 2 9606 Homo sapiens -0.021480354247842115 QYFHQLEK Unmodified 1091.54 0.53999412 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 7.5 0.5 1 1 44.02 44.071 3 0.00016276 10920 20230619_1887_Aki_TMTPro18x_K_F7 149.72 112.53 912140 743380 849540 942140 909340 996370 1003800 1002000 1133600 1063100 1209100 1254800 1187600 993970 1091600 1315800 1278800 1256800 842930 682230 869690 935800 942490 1003500 1010800 1025000 1150200 1076900 1236300 1256600 1208300 1050700 1123300 1313100 1221600 1194400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1014799999.9999999 22219 1723 20815 41849;41850 33651;33652 33651 2 9606 Homo sapiens -0.002114276995371256 QYFSQFK Unmodified 946.45487 0.45486751 1285 A0A1K0FUB6;Q8WWM9;K7EMC7 CYGB Cytoglobin yes no 0 0 0 3 0 1 52.429 52.488 2 0.020548 15248 20230619_1882_Aki_TMTPro18x_K_F3 110.31 40.042 494980 495340 466900 368830 376530 509980 512530 528420 664700 156810 101660 91899 150400 94980 183630 156530 129070 73346 458120 452340 474840 385630 402940 505570 513290 528410 644420 177340 133020 96758 153560 101210 182960 151770 123640 70750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309750000 22220 1285 20816 41851 33653 33653 1 9606 Homo sapiens -0.020501731653325805 QYFVQWCADR Unmodified 1371.603 0.60300508 4733 Q9Y3Z3;Q9Y3Z3-4;Q9Y3Z3-3;A0A2R8YCS7;A0A2R8YFV6;A0A2R8YF18 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes no 0 0 0 1 0 1 54.843 54.843 2 0.0070574 16379 20230619_1880_Aki_TMTPro18x_K_F1 85.533 75.301 27696 27795 31658 31910 28787 34985 32632 37387 33691 25632 28271 24075 27392 27022 35871 32770 30473 30507 25676 25466 31792 31942 30241 35191 32734 37699 34018 26498 29219 24658 28412 28063 36013 32724 29209 28999 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33938000 22221 4733 20817 41852 33654 33654 1 9606 Homo sapiens -0.06793229973823145 QYGITGENVR Unmodified 1135.5622 0.56218613 4369 Q96JB5-2;Q96JB5;Q96JB5-4;J3QL86;J3QQY1 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 yes no 0 0 0 4.5 0.5 1 1 39.457 39.524 2 0.00033418 9352 20230619_1883_Aki_TMTPro18x_K_F4 130.98 79.916 32876 24397 31123 29878 37584 41891 41809 39815 43148 41389 43030 40746 40020 34232 35027 41263 50300 42529 30368 22391 31858 29888 38640 41397 41941 40848 43874 41725 44004 41180 40721 35901 36579 41406 47925 40409 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67415000 22222 4369 20818 41853;41854 33655 33655 1 9606 Homo sapiens -0.0001724802177704987 QYGNEVFLAK Unmodified 1167.5924 0.59242362 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 7 0.816 1 1 1 53.057 53.132 3 0.00023581 14899 20230619_1888_Aki_TMTPro18x_K_F8 116.52 91.663 709470 647470 713320 743770 663040 801570 699980 757850 838650 808160 792110 766570 903780 657560 793160 931970 811050 830500 656530 593400 723740 744150 694400 805150 708340 778440 844930 812820 819570 776800 912830 696820 810260 926030 775970 789820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1227400000 22223 3621 20819 41855;41856;41857 33656;33657 33657 2 9606 Homo sapiens 0.01533110643413238 QYIATIHSR Unmodified 1087.5774 0.57744226 4301 Q92621;B4DM61 NUP205 Nuclear pore complex protein Nup205 yes no 0 0 0 2 0 1 35.729 35.786 3 7.3291E-06 7987 20230619_1881_Aki_TMTPro18x_K_F2 167.67 139.5 42992 29935 39640 41107 53540 58808 54558 50784 58197 51645 56393 50735 56134 47981 50586 56353 61741 52277 39690 27513 40771 40813 54540 57925 55041 52449 58996 52144 57894 51487 57048 50023 52180 56257 58900 49731 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82267000 22224 4301 20820 41858 33658 33658 1 9606 Homo sapiens 0.03715663566094918 QYIISEELISEGK Unmodified 1507.777 0.77698951 1968 A6NFX8;Q9UKK9;A6NJU6;A6NCQ0;C9JYY9 NUDT5 ADP-sugar pyrophosphatase yes no 0 0 0 4.6 1.02 1 1 2 1 60.516 60.555 2;3 7.6293E-22 18120 20230619_1885_Aki_TMTPro18x_K_F5 241.31 165.08 205420 140480 193010 190410 181000 186670 196310 185730 184200 227920 208750 217630 246050 197570 227260 250070 216880 256590 189660 129110 196870 188160 189220 189050 196760 190990 189610 227680 214770 220700 248930 207330 231000 250750 207880 243500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 509270000 22225 1968 20821 41859;41860;41861;41862;41863 33659;33660;33661 33661 3 9606 Homo sapiens 0.04341209212657304 QYLDQQQYQSALFWADK Unmodified 2131.0011 0.0010692176 786 B4DK74;A0A3B3ISD2;B2RCW0;A0A024RDZ2;Q13042-3;Q13042-2;Q13042 CDC16 Cell division cycle protein 16 homolog yes no 0 0 0 8 0 1 62.584 62.609 3 0.0001748 18907 20230619_1888_Aki_TMTPro18x_K_F8 86.367 70.424 29532 29290 31846 29810 27439 27822 36824 34279 32524 37320 39359 37753 40957 33028 40568 38443 39203 47554 27361 26808 32081 30070 29054 28457 36461 34661 33666 37545 40132 38151 41711 34539 41175 39059 37580 45040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73570000 22226 786 20822 41864 33662 33662 1 9606 Homo sapiens -0.019191274239801714 QYLFSLYECR Unmodified 1377.6387 0.63872189 3908 Q15008;Q15008-4;B3KT66;Q15008-3;Q15008-2;H7C531 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 2 0 1 60.646 60.658 3 8.4047E-06 18889 20230619_1881_Aki_TMTPro18x_K_F2 137.89 115.81 20316 19264 18805 22453 17530 23230 22221 23222 27250 26478 23847 21752 21477 22780 21911 25002 22467 24845 18793 17656 19238 22423 18476 23425 22288 23807 27342 26447 24511 22334 22048 23567 22323 25074 21507 23591 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28106000 22227 3908 20823 41865 33663 33663 1 9606 Homo sapiens -0.03499192516801486 QYLPHVAR Unmodified 982.53485 0.53484916 3239 Q5T8U5;Q5T8U7;O15260-2;O15260;B7Z605;B7Z8F3;B7Z7A8;O15260-3 SURF4 Surfeit locus protein 4 yes no 0 0 0 1.67 0.471 1 2 37.294 37.334 3 0.0032861 8577 20230619_1881_Aki_TMTPro18x_K_F2 96.492 51.531 129460 96171 130490 139590 145830 144190 170380 178330 191060 161620 174080 163540 194560 150170 150890 172700 213080 181180 119650 88425 132760 137470 150780 146220 170990 179320 192710 164290 180190 165560 195810 156630 157730 173600 203050 172120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 805960000 22228 3239 20824 41866;41867;41868 33664;33665 33664 2 9606 Homo sapiens 0.04288313228516927 QYLSTPDSQSLR Unmodified 1393.6838 0.68375782 4094 Q68E01-2;Q68E01;Q68E01-3;A0A096LNW8 INTS3 Integrator complex subunit 3 yes no 0 0 0 6 0 1 44.746 44.835 2 1.0038E-11 11616 20230619_1886_Aki_TMTPro18x_K_F6 195.51 161.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22229 4094 20825 41869 33666 33666 1 9606 Homo sapiens 0.00266329550095179 QYMEEENYDK Oxidation (M) 1363.5238 0.52381129 2627 B4DZ87;O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 1 0 1 0 1 40.619 40.619 3 6.3524E-05 10359 20230619_1880_Aki_TMTPro18x_K_F1 133.12 125.4 62444 44925 60561 69113 79986 69139 83482 75171 78220 70787 85278 85815 78724 65854 87072 86250 99039 82989 57682 41341 62009 67781 81453 70072 83782 76300 80230 72218 86916 85793 80957 69652 89042 86171 94533 78916 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89961000 22230 2627 20826 41870 33667 33667 1577 1 9606 Homo sapiens -0.14340966509280406 QYMFSSLK Oxidation (M) 1018.4794 0.4793677 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 1 0 2 0 1 50.223 50.275 3 0.0077692 14576 20230619_1881_Aki_TMTPro18x_K_F2 74.92 44.666 86567 74805 100950 80387 106190 118390 97226 101330 122730 46312 44540 42128 46305 37388 55818 49388 47823 36504 80184 68529 101300 81290 109650 116450 99333 103190 120250 49780 49469 42867 47676 39349 56110 48746 45756 34850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64984000 22231 3444 20827 41871 33668 33668 2079 1 9606 Homo sapiens -0.029132810741089088 QYMFSSLK Unmodified 1002.4845 0.48445308 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 4 0 1 55.101 55.112 2 0.0023337 16287 20230619_1883_Aki_TMTPro18x_K_F4 128.38 85.137 132280 111710 129740 116240 140870 217770 164660 170870 236240 43018 39353 28238 29984 25615 61178 33361 33421 26523 122320 102320 132200 118390 146710 211240 166680 174270 228090 50294 49210 29393 32463 26923 59974 33111 32197 25289 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26841000 22232 3444 20827 41872 33669 33669 1 9606 Homo sapiens -0.01668977211488709 QYNCLTQR Unmodified 1081.4975 0.49747738 4718 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 yes yes 0 0 0 8 0 1 36.774 36.76 2 0.00021223 8169 20230619_1888_Aki_TMTPro18x_K_F8 167.24 118.68 47563 29162 39155 41881 54573 56265 50231 53879 62816 36476 38772 34235 42124 31343 36792 44744 53019 37070 43847 26833 40719 41426 55359 55736 51269 54716 62252 37778 41025 34816 42636 33146 38438 44296 50461 35349 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20694000 22233 4718 20828 41873 33670 33670 1 9606 Homo sapiens -0.04001146099426478 QYNGVPLDGRPMNIQLVTSQIDAQR Oxidation (M) 2828.4239 0.42392509 4189 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 1 1 1 0 1 54.735 54.735 3 7.7918E-12 16307 20230619_1880_Aki_TMTPro18x_K_F1 115.11 82.127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22234 4189 20829 41874 33671 33671 2695 1 9606 Homo sapiens 0.08285008455914067 QYNNPIGLYSAETLR Unmodified 1737.8686 0.86859848 1113 B4DND5;A0A8I5KX76;O75112;V5T7C5;B4DGP4;A0A0S2Z501;O75112-5;C9JWU6;O75112-7;O75112-4;A0A0C4DGG7 LDB3;OPN4 LIM domain-binding protein 3 yes no 0 0 0 8 0 1 56.607 56.664 2 2.9328E-13 16428 20230619_1888_Aki_TMTPro18x_K_F8 160.15 129.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22235 1113 20830 41875 33672 33672 1 9606 Homo sapiens 0.029178926298527585 QYNVDYK Unmodified 928.42905 0.42904669 1127 B3KM48;A0A0S2Z5H7;D6RAX7;Q9BT78;Q53FV3;D6RFN0;Q9BT78-2;D6RD63 COPS4 COP9 signalosome complex subunit 4 yes no 0 0 0 6 0 1 43.214 43.308 2 0.011144 10945 20230619_1886_Aki_TMTPro18x_K_F6 121.62 79.51 53993 35072 49490 56235 58227 71445 66590 63407 81428 59266 71194 78856 73480 61064 66044 62455 93582 86311 49827 32306 50840 55208 60099 70851 67083 65234 81616 60757 73674 78528 74595 63682 68779 64086 89222 81753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49492000 22236 1127 20831 41876 33673 33673 1 9606 Homo sapiens -0.03803067407625349 QYPEFPWTDVQAEIFR Unmodified 2024.9632 0.96322715 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 7 0 1 64.944 64.971 2 8.2199E-14 20048 20230619_1887_Aki_TMTPro18x_K_F7 210.38 195.18 46515 36853 40865 44548 41480 47492 35162 41133 45452 53331 52347 61021 58007 58271 60808 64925 62766 71579 42960 33809 42002 44393 42919 47660 36182 42781 46058 53476 53706 61482 59217 60517 61918 65499 60096 67883 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13048000 22237 307 20832 41877 33674;33675 33674 2 9606 Homo sapiens -0.00825593618833409 QYPISLVLAPTR Unmodified 1356.7765 0.776536 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;B4E010;O15523-3 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 5 0 1 61 61.05 2 5.1725E-05 18341 20230619_1885_Aki_TMTPro18x_K_F5 156.01 139.87 139060 129240 119570 120450 168910 258180 165850 153880 276720 30468 23854 31554 30669 29089 61574 39740 33730 30013 128540 118230 123940 124160 172310 248060 170510 161070 264740 38064 36771 32006 32691 30618 60410 39295 32516 28624 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112200000 22238 1018 20833 41878 33676 33676 1 9606 Homo sapiens 0.11241879074100325 QYPLVTPNEER Unmodified 1344.6674 0.66737948 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258 COPB2 Coatomer subunit beta' yes no 0 0 0 3.5 0.5 1 1 44.887 44.945 2 4.2046E-06 11807 20230619_1882_Aki_TMTPro18x_K_F3 160.53 137.1 153710 136370 151360 168080 144800 182770 175080 169890 187820 217260 216420 228550 241760 198700 186520 260810 257770 252350 142190 125080 154000 167310 151910 183370 175200 175740 191920 217320 221840 230510 243320 209250 194980 260380 245910 239790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 170750000 22239 3031 20834 41879;41880 33677;33678;33679 33678 3 9606 Homo sapiens 0.008832483839796623 QYPWGTVQVENEAHCDFVK Unmodified 2306.0426 0.042616456 3875 Q14141;Q541S4;Q548C9;B1AMS2;Q6B514;B4DZW0;Q8NFH9;Q14141-2;Q14141-4;B4DPT4;Q6NT82;B4E049;Q8NFI2;Q8NFI0 SEPT6 Septin-6 yes no 0 0 0 5.5 0.5 1 1 56.041 56.111 3 1.8649E-39 16484 20230619_1886_Aki_TMTPro18x_K_F6 253.11 231.12 112390 95671 120110 133660 89827 103160 131490 127610 133070 168340 132080 123900 178610 118300 122420 195260 152940 148870 104010 87879 121020 131450 96791 107170 130250 129790 135690 166500 137500 127690 177940 126410 127560 192150 146010 141900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105760000 22240 3875 20835 41881;41882 33680;33681 33681 2 9606 Homo sapiens -0.05816314727007921 QYPWGVVQVENENHCDFVK Unmodified 2347.0692 0.069165558 1492;2109;886 A0A087X142;B7ZVZ1;A6NMH6;A6NFQ9;F8W8I8;Q92599-3;Q92599-2;Q92599-4;Q92599;B7Z277;E7EW69;A8K7M3;E7EX04;B5ME97;Q9P0V9;Q9P0V9-2;Q9P0V9-3;Q9NSH2;Q59H84;B7Z371;Q9H9P7;D6RGI3;A0A384P5S0;D6RER5;Q9NVA2;Q9NVA2-2;D6RDU5;Q96KC0 SEPT8;SEPT10;DKFZp547B243;SEPT11 Septin-8;Septin-10;Septin-11 no no 0 0 0 6 1 1 1 57.241 57.3 3 5.3471E-05 16789 20230619_1885_Aki_TMTPro18x_K_F5 88.551 81.439 25130 22628 24991 28909 28588 32420 28109 33460 28620 37060 38730 43126 38208 30374 37574 42847 40599 47560 23250 20761 25477 28721 29399 32535 28413 34191 29570 37410 39273 43063 38965 32424 38418 43099 38864 45097 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26087000 22241 886;2109;1492 20836 41883;41884 33682;33683 33682 2 9606 Homo sapiens -0.05048625835615894 QYPYNNLYLER Unmodified 1471.7096 0.70957864 3345 O95169-3;O95169 NDUFB8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial yes no 0 0 0 7 0 1 51.411 51.489 2 4.332E-05 14252 20230619_1887_Aki_TMTPro18x_K_F7 143.4 112.17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22242 3345 20837 41885 33684 33684 1 9606 Homo sapiens -0.007407762076582003 QYQAGQTVTCFLK Unmodified 1542.7501 0.75006325 1532 A0A3B3IUD7;Q14690 PDCD11 Protein RRP5 homolog yes no 0 0 0 3 0 1 55.374 55.415 3 0.00043542 16550 20230619_1882_Aki_TMTPro18x_K_F3 92.856 74.939 61458 54074 60340 57937 59453 69528 61690 60951 76920 47365 43747 37212 45554 34658 54736 42158 40316 40337 56847 49533 61361 58374 61942 69239 62535 62495 76100 48355 46507 38181 46842 36261 54632 42186 38714 38331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49202000 22243 1532 20838 41886 33685 33685 1 9606 Homo sapiens 0.00039822120493226976 QYQATGFLWEQYSDRDGR Unmodified 2219.0032 0.0031944826 1401 Q13724;A0A384MDR6;Q58F09;Q13724-2;A0A8I5KTK5;A0A3B3IRK6;A0A3B3IRW2;A8K9K4;A0A8I5KQG9 MOGS;GCS1 Mannosyl-oligosaccharide glucosidase yes no 0 0 1 7 0 1 55.493 55.553 3 9.7253E-49 15984 20230619_1887_Aki_TMTPro18x_K_F7 285.06 254.09 55849 44882 55597 58124 50803 61841 55393 51087 71654 64297 59248 70388 65889 60399 81537 72845 70551 82617 51635 41202 56444 57648 53345 61992 56088 53317 71588 64490 61783 70800 67808 63285 81986 73575 67692 78322 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48201000 22244 1401 20839 41887 33686 33686 1 9606 Homo sapiens -0.05754698686178017 QYQIDAAIVR Unmodified 1175.6299 0.62987176 1592;3864 Q13620-3;A0A7P0T954;Q13620;Q13620-1;K4DI93;A0A669KAX4;A0A7P0TAQ3;A0A7P0T9L3;A0A7P0T8P8;A0A7P0T9C8;Q13619;B2RBV7;A0A0A0MR50;Q13619-2;B4DKT2 CUL4B;CUL4A Cullin-4B;Cullin-4A no no 0 0 0 7 0 1 48.801 48.888 2 7.2997E-07 13082 20230619_1887_Aki_TMTPro18x_K_F7 154.85 123.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22245 1592;3864 20840 41888 33687 33687 1 9606 Homo sapiens 0.04908201909051968 QYTESQLR Unmodified 1023.4985 0.49852324 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B3KVT9;H7C495 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 4 0 1 35.595 35.643 2 0.0025154 7769 20230619_1883_Aki_TMTPro18x_K_F4 125.49 36.198 68506 49695 66178 76189 96860 90909 87729 90035 97494 84512 90865 74725 75268 65959 93057 58660 83049 70016 63283 45727 67928 74916 97816 90794 89272 91864 98476 85424 92787 76009 78157 67967 93564 59826 79467 66429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56400000 22246 1984 20841 41889 33688 33688 1 9606 Homo sapiens -0.012286084588481572 QYTGINAISK Unmodified 1093.5768 0.57677356 622 P61158;A0A024RAI1;Q59FV6;B4DXW1;B4DT29;B4DTI0 ACTR3 Actin-related protein 3 yes no 0 0 0 1.5 0.5 1 1 47.908 47.944 3 0.0070164 13515 20230619_1880_Aki_TMTPro18x_K_F1 70.488 24.981 103420 79017 104580 112540 117300 138810 111910 117520 146350 120970 127420 128640 135160 109970 115530 137470 134990 126230 95596 72628 106380 111190 120820 137830 114230 121600 146350 122370 131950 129640 136750 115510 119020 137020 128910 120040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 309570000 22247 622 20842 41890;41891 33689;33690 33689 2 9606 Homo sapiens 0.03372824126358864 QYTSLLGK Unmodified 908.49673 0.49673232 694 A0A024RBT2;Q502X2;A0A0S2Z5U7;Q9NR28-2;Q9NR28;A0A0S2Z5P6;Q9NR28-3;K7X1S0;Q53HB7;H7BZQ7;H7BZK7;A0A2U3TZH2 DIABLO Diablo homolog, mitochondrial yes no 0 0 0 2.5 0.5 1 1 52.279 52.331 3 0.0079972 15189 20230619_1882_Aki_TMTPro18x_K_F3 81.594 12.171 81802 73354 81273 87891 92694 99633 98245 91143 107170 104280 118450 109020 116510 91572 103900 119910 123380 118160 75681 67259 82819 87721 95502 99683 99007 94071 109120 104830 120850 109930 118330 96565 107040 119900 117820 112270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53550000 22248 694 20843 41892;41893 33691 33691 1 9606 Homo sapiens 0.03882382523192973 QYTSPEEIDAQLQAEK Unmodified 1848.8741 0.87413737 3851 Q13442;F8WBW6 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes no 0 0 0 3 0.816 1 1 1 55.556 55.58 3 1.7267E-08 16411 20230619_1883_Aki_TMTPro18x_K_F4 138.05 126.78 190700 180820 189250 198540 188600 214900 210990 231240 255450 259380 235200 244150 285420 229850 237140 312260 279600 284680 176500 165630 192430 199370 196660 216490 212880 235750 257080 260150 244500 248140 287380 241970 244750 310690 267140 270660 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 657990000 22249 3851 20844 41894;41895;41896 33692;33693;33694 33694 3 9606 Homo sapiens -0.016344733689948043 QYVETHWCAQSEK Unmodified 1664.7253 0.72530506 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 5.5 0.5 1 1 43.432 43.519 3 1.3048E-06 10999 20230619_1885_Aki_TMTPro18x_K_F5 140.84 123.84 238720 197610 221000 229380 211440 243760 217340 233640 229930 269400 275690 256440 277510 238560 261400 300200 287900 274520 220610 181190 225860 229280 220660 245200 219370 240290 235560 269870 280680 260440 282420 249900 267770 299150 275110 261070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 200950000 22250 4386 20845 41897;41898 33695;33696;33697 33696 3 9606 Homo sapiens -0.08046857752901815 QYVGFATLPNQVHR Unmodified 1628.8423 0.84232415 3014 X5DNA9;G3XAH0;Q7KYV2;Q59GE1;Q99648;Q99719;X5DQL7;E7EQM7;E7EPG2;E7EX32;Q99719-2 SEPT5;CDCrel-1 Septin-5 yes no 0 0 0 3.5 0.5 1 1 48.418 48.477 3 1.9247E-05 13263 20230619_1883_Aki_TMTPro18x_K_F4 113.37 90.791 175390 142960 171930 147810 158880 180560 183830 193480 208790 198100 196130 210520 220160 194640 188650 237250 247430 252670 162150 130950 174610 149470 166800 180440 184740 196800 210820 200340 202970 212640 222560 203550 195900 238440 236210 239800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155050000 22251 3014 20846 41899;41900 33698 33698 1 9606 Homo sapiens 0.05305668249025075 QYWCTFK Unmodified 1031.4535 0.4534873 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 3 0 1 54.377 54.424 2 0.0142 16096 20230619_1882_Aki_TMTPro18x_K_F3 112.94 69.915 83040 68250 76501 65760 84410 106410 99537 93566 109350 84680 73772 64116 95141 65199 80511 88766 85017 74992 76737 62479 78343 67215 87575 104210 99736 96187 109400 85499 78242 66126 95639 68542 82414 88030 81231 71410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201150000 22252 385 20847 41901 33699 33699 1 9606 Homo sapiens -0.060981305257428176 QYYTLLNK Unmodified 1041.5495 0.54949617 755 Q9UN86;Q9UN86-2;A0A024RDE5;A0A024RDB2;A8K6V7;A0A7I2YQD9;A0A7I2V3E2;A0A7I2YQS2;D6RB17;D6RAC7;D6R9A4;D6RBW8;A0A7I2V2R0;D6RGJ4;D6RBR0 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 0 3 0 1 54.467 54.514 3 0.00071976 16150 20230619_1882_Aki_TMTPro18x_K_F3 124.98 93.561 169770 145770 170940 170850 156710 180090 172040 178950 195150 199310 170820 142140 180630 138050 167310 204360 181950 146030 157040 133650 173330 170660 164380 181390 173360 183390 196670 198590 176650 146900 183330 146080 171370 200930 173700 139450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284250000 22253 755 20848 41902 33700 33700 1 9606 Homo sapiens 0.030383405859993218 QYYTLLNQAPDMLHR Oxidation (M) 1877.9094 0.90941744 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7P0P2U7;A0A7I2YQU8;A0A7I2V651;Q6ZP53;E5RJU8;A0A7I2V2S5;Q13283-2;E5RH42;E5RIF8;E5RH00;A0A7I2V4Y8;A0A7I2V3C4 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 1 0 1.5 0.5 1 1 52.2 52.219 3 1.1914E-10 15257 20230619_1880_Aki_TMTPro18x_K_F1 150.76 130.67 46159 34634 37451 49815 49240 50244 42457 41594 47261 46936 55718 46090 51202 36928 39838 51918 54161 47199 42593 31839 39008 49024 50027 50577 43360 43254 48214 47127 56486 46566 51822 39212 41565 51631 51634 44906 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 307040000 22254 3846 20849 41903;41904 33701 33701 2519 1 9606 Homo sapiens 0.005579106777986453 QYYTLLNQAPDMLHR Unmodified 1861.9145 0.91450282 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7P0P2U7;A0A7I2YQU8;A0A7I2V651;Q6ZP53;E5RJU8;A0A7I2V2S5;Q13283-2;E5RH42;E5RIF8;E5RH00;A0A7I2V4Y8;A0A7I2V3C4 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 2.5 0.5 1 1 57.708 57.732 3 4.3885E-14 17641 20230619_1881_Aki_TMTPro18x_K_F2 179.56 159.46 127830 102570 112310 131990 135020 193190 149030 165390 177600 182640 147260 177390 206980 159350 132420 253160 216210 234050 118070 94150 115920 131620 139250 189920 150320 171220 178300 183510 155260 179760 205820 169990 141270 251410 206190 222430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 953790000 22255 3846 20849 41905;41906 33702 33702 1 9606 Homo sapiens 0.018022145404302137 QYYVLCSSR Unmodified 1174.5441 0.54409322 3102 Q9NUU7;I3L0H8;Q9UMR2;Q9UMR2-4;Q9UMR2-2;A0A0U4B4U6;F6QDS0;H3BQK0;Q53G16;Q7Z4W5;Q9HBZ9;Q2NL95;B4DS24;Q69YM2;I3L352;Q68DY7;B4DL69;A0A024QZ90;Q59FQ9;Q9UMR2-3;Q9NUU7-2 DDX19A;DDX19B;DKFZp762C1313;DKFZp686C21137;hCG_1998531 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B yes no 0 0 0 2 0 1 45.261 45.342 2 0.00055614 12293 20230619_1881_Aki_TMTPro18x_K_F2 131.62 112.52 116950 97715 99859 102010 119900 164630 132930 116880 177790 68139 62849 55985 63651 48723 86272 57569 69883 62099 108020 89506 103230 103490 123680 160550 134500 121410 173650 71382 69934 57189 66021 51017 86260 58057 66968 58962 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42595000 22256 3102 20850 41907 33703 33703 1 9606 Homo sapiens -0.03619706268136724 RAAAEVNQDYGLDPK Unmodified 1645.806 0.80599822 3406 P07954-2;A0A804HI24;A0A0S2Z4C3;P07954;A0A804HKE6;A0A0S2Z3S9;A0A0S2Z3W2;A0A0S2Z3X6;A0A0S2Z4H0 FH Fumarate hydratase, mitochondrial yes no 0 0 1 4.5 0.5 1 1 42.971 43.033 3;4 1.7486E-05 10796 20230619_1885_Aki_TMTPro18x_K_F5 109.16 74.984 195620 169190 177370 212380 204520 230980 220300 255570 252770 261710 293970 262340 294850 247980 195310 323750 298930 281840 180810 155230 182340 211170 210820 232690 222320 259410 257330 264120 299330 266090 296220 260230 206780 321390 284890 268200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 399080000 22257 3406 20851 41908;41909 33704;33705 33705 2 9606 Homo sapiens 0.008927465616352492 RAAASLSQPEEEQK Unmodified 1542.7638 0.76379906 4691 Q9UNS1-2;Q9UNS1;B3KMU4;B4DL70 TIMELESS Protein timeless homolog yes no 0 0 1 3 0 1 35.921 35.978 3 0.00031715 7952 20230619_1882_Aki_TMTPro18x_K_F3 97.631 68.825 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22258 4691 20852 41910 33706 33706 1 9606 Homo sapiens 0.014127711533319598 RAADALEEQQR Unmodified 1285.6375 0.63747633 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;A8K394;F5H4J1;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 2 0 1 31.535 31.598 3 3.2857E-05 6352 20230619_1881_Aki_TMTPro18x_K_F2 122.45 64.955 12209 7991.6 14789 12274 15512 13178 14123 13452 21664 13965 14364 12552 13243 9589 17601 9098.3 14653 12459 11295 7357 14798 12058 15994 13270 14550 13738 21329 14059 15027 12700 13747 9979 17610 9367 14033 11806 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9381000 22259 349;3906 20853 41911 33707 33707 1 9606 Homo sapiens 0.0060830943866676535 RAADEVLAEAK Unmodified 1171.6197 0.619701 1500 A0A3B3IRP5;Q6P1J9;A0A1B0GUB2;A0A2R8YHB3;B4DV47;A0A2R8Y640 CDC73 Parafibromin yes no 0 0 1 3.5 0.5 1 1 44.019 44.076 3 0.0076958 11422 20230619_1882_Aki_TMTPro18x_K_F3 70.089 44.43 144800 116440 138290 155870 180030 208800 175240 160870 219190 167310 185580 202940 189750 163850 189620 196410 203310 184860 133830 106930 141780 154770 183730 205970 178240 167880 219320 169980 192310 203060 193570 171960 193600 196210 194260 175780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 325680000 22260 1500 20854 41912;41913 33708;33709 33708 2 9606 Homo sapiens 0.04075594183791509 RAAEACARPHGPPPDLAAR Unmodified 2012.0123 0.012259801 3968 Q3KQV9;A0A087X226 UAP1L1 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 yes no 0 0 2 8 0 1 30.472 30.488 5 9.7243E-05 5774 20230619_1888_Aki_TMTPro18x_K_F8 89.374 77.228 6949.8 5315.8 7431.1 6165.4 9458.2 8231.6 7445.5 8056.1 9420.7 9947.6 11465 12775 12494 9310.6 8233.8 10831 13471 10347 6427.4 4875.5 7527.6 6188.4 9594.4 8170.2 7690.2 8289 9572.8 10035 11714 12717 12511 9800.9 8749.2 10827 12817 9844.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7630400 22261 3968 20855 41914 33710 33710 1 9606 Homo sapiens 0.04673416189143609 RAAEDDEDDDVDTK Unmodified 1592.6438 0.64380308 2720 P06454-2;Q8TBK9;P06454;B8ZZQ6;Q53S24;Q15202;V9HVW6;Q15204;Q86YS2;B8ZZW7;B8ZZA1;Q15200;H7C2N1;Q7Z4R6 PTMA;PTMAP7 Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 0 0 1 2.2 1.17 2 1 1 1 34.4 34.434 3 5.6879E-22 7999 20230619_1880_Aki_TMTPro18x_K_F1 219.52 183.92 148170 72158 188230 191000 247230 304660 189640 245810 226370 181070 293200 388370 249870 275180 252930 122180 362200 361120 136970 67134 188800 184320 250790 297710 195940 253320 230910 192780 296430 380400 257030 279410 262410 139080 345480 340470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6116399999.999999 22262 2720 20856 41915;41916;41917;41918;41919 33711;33712;33713 33712 3 9606 Homo sapiens -0.12881306701819994 RAAEDDEDDDVDTKK Unmodified 1720.7388 0.7387661 2720 P06454-2;Q8TBK9;P06454;B8ZZQ6;Q53S24;Q15202;V9HVW6;Q15204;Q86YS2;B8ZZW7;B8ZZA1;Q15200;H7C2N1;Q7Z4R6 PTMA;PTMAP7 Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 0 0 2 3.29 2.19 2 1 2 1 1 35.559 35.601 3;4 8.5461E-14 7776 20230619_1882_Aki_TMTPro18x_K_F3 178 167.94 493290 234840 631920 622280 942450 1064000 636430 936580 721240 525630 999970 1221900 773180 914380 853020 309060 1042300 974710 456000 218520 634920 601540 946100 1038300 663240 953690 739850 574380 1004500 1196800 801770 920580 873300 359630 994980 918980 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 14437000000 22263 2720 20857 41920;41921;41922;41923;41924;41925;41926 33714;33715;33716;33717;33718;33719 33716 6 9606 Homo sapiens -0.09277373230634112 RAAEEAEEAR Unmodified 1130.5316 0.53161428 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 1 1 0 1 26.985 26.985 3 0.00029954 4840 20230619_1880_Aki_TMTPro18x_K_F1 115.29 72.951 7566.2 6092.1 9670.3 11909 20554 18432 16933 17134 16810 11280 17813 20783 14847 16975 16615 6955.7 20481 16366 7011.7 5622.4 9824.8 11619 20346 18110 17271 17435 17148 12010 18125 20512 15362 17092 17020 7715.3 19530 15460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10645000 22264 3921 20858 41927 33720 33720 1 9606 Homo sapiens -0.028430264068219913 RAAEEEDEADPK Unmodified 1358.595 0.5950024 1256 A0A158RFU3;P20962;O15256;A2VCM6 PTMS Parathymosin yes no 0 0 1 1.75 0.829 2 1 1 32.643 32.676 3;4 3.053E-05 7039 20230619_1880_Aki_TMTPro18x_K_F1 103.88 80.505 109020 58213 136490 154760 205270 237990 155030 224500 210420 129230 230480 292780 184740 215100 199890 104380 252250 256370 100800 54135 137510 149210 206540 233730 161120 227540 211610 140740 233950 286830 191140 218410 205330 115540 240880 241880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2109799999.9999998 22265 1256 20859 41928;41929;41930;41931 33721;33722 33721 2 9606 Homo sapiens -0.06995130480254375 RAAEEEDEADPKR Unmodified 1514.6961 0.69611342 1256 A0A158RFU3;P20962;O15256;A2VCM6 PTMS Parathymosin yes no 0 0 2 1.5 0.5 1 1 30.304 30.338 4 5.7696E-06 5865 20230619_1881_Aki_TMTPro18x_K_F2 132.97 129.06 35485 60964 153350 51203 292660 63022 183490 94912 45252 40836 61598 22239 31763 15503 520550 9145.7 15501 19400 33939 55643 147150 52985 287260 64347 186940 93517 54747 43521 61964 23329 55990 15715 490020 11502 19741 18303 3 3 3 3 3 3 3 3 3 3 3 3 3 2 3 3 3 3 134020000 22266 1256 20860 41932;41933 33723;33724;33725 33725 3 9606 Homo sapiens -0.04064678777535846 RAAEEEPSTSATVPMSK Unmodified 1789.8516 0.85162779 136 A0A7P0TAH4;A0A7P0Z4K4;A8K0I0;A0A024R1C1;A0A7P0TA15;Q13356;A0A7P0TB19 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes no 0 0 1 4 0 1 40.052 40.094 3 5.356E-07 9577 20230619_1883_Aki_TMTPro18x_K_F4 112.34 95.594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22267 136 20861 41934 33726 33726 1 9606 Homo sapiens -0.011703960382874357 RAAGDGGSGPPEK Unmodified 1197.5738 0.57381344 1116 O75150;O75150-4;A0A0S2Z537;A8K6K1;H3BP71;A0A0S2Z4Z2;B4DMM1;Q6ZN99;O75150-3;H3BUL6;I3L332;H3BQ99 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 0 0 1 4 0 1 30.259 30.326 3 0.043167 5703 20230619_1883_Aki_TMTPro18x_K_F4 61.409 27.543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22268 1116 20862 41935 33727 33727 1 9606 Homo sapiens -0.017070509984250748 RAAPEASGTPSSDAVSR Unmodified 1657.802 0.80197548 373 A0A024R611;P31146;Q59G88 CORO1A Coronin;Coronin-1A yes no 0 0 1 4 0 1 29.763 29.83 3 2.4006E-24 5507 20230619_1883_Aki_TMTPro18x_K_F4 183.6 167.66 6929.9 5327.9 7937.9 6036.6 9324.4 8263.2 4428.4 4698.5 8782.4 9219.3 10911 8185.9 8873.5 7569.1 7334.7 8970 9596.1 9328.2 6413.2 4885.4 7981.6 6069.7 9436.7 8114.4 4893.4 5165.5 8790 9049.9 10980 8342.8 9048.4 7904.3 7619.5 9006.8 9157.8 8857.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18622000 22269 373 20863 41936 33728 33728 1 9606 Homo sapiens -0.0006134293205377617 RAATLAQELEK Unmodified 1228.6776 0.67755023 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709;Q68EN4 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 1 6.5 0.5 1 1 45.173 45.259 3 0.00029206 11420 20230619_1887_Aki_TMTPro18x_K_F7 106.79 36.192 463050 376660 404890 449980 383640 505990 452790 463980 509390 539590 533760 551970 627630 495690 434480 606840 621670 602720 427710 345480 416190 449130 402870 506270 454410 478890 517000 541630 550500 557880 628300 519240 456470 607290 592870 572570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 958890000 22270 1432 20864 41937;41938 33729;33730 33730 2 9606 Homo sapiens 0.0723585610921873 RAATTLDEK Unmodified 1003.5298 0.52982336 2338 B7Z6D5;B3GQE6;Q96GQ7;Q3MI07;A0A087WYH5 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 0 1 5 0 1 34.267 34.355 3 0.00097231 7294 20230619_1885_Aki_TMTPro18x_K_F5 101.48 61.772 48667 27960 61622 57638 100090 101960 73683 98244 85383 56809 87397 94981 73862 68743 70525 44393 94227 90855 45016 25866 62064 56307 100120 99586 76245 99403 86289 60802 89028 93749 75711 70505 72927 47696 89903 85814 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44310000 22271 2338 20865 41939 33731 33731 1 9606 Homo sapiens 0.028199645752465585 RAAVGQESPGGLEAGNAK Unmodified 1710.8649 0.86491009 3001 G1UI16;Q29RF7;B3KMN2;Q96DB6 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 1 5.5 0.5 1 1 37.873 37.957 3 6.3349000000000005E-24 8697 20230619_1885_Aki_TMTPro18x_K_F5 206.81 180.67 77851 62469 72753 77617 79297 92995 84505 80628 93630 95596 101530 90795 95920 81157 85327 104730 95950 85712 71939 57322 74466 77332 82048 92574 85190 83626 95197 95675 103470 92119 97569 85255 87645 103760 91631 81649 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 124250000 22272 3001 20866 41940;41941 33732;33733 33732 2 9606 Homo sapiens 0.037912228560117 RAAVLLEQER Unmodified 1183.6673 0.6673199 3850 Q13435;Q7Z3K9;E9PJ04;H0YCG1;E9PJT3 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 1 6 0 1 38.065 38.141 3 0.00030437 8754 20230619_1886_Aki_TMTPro18x_K_F6 111.33 79.464 145150 116460 127340 134430 151720 183820 161450 176650 190550 96272 107350 87534 92016 63269 126840 105710 116980 69717 134070 106790 131280 134960 156130 181900 163080 178720 188820 101470 113330 88624 95995 68322 127690 103610 111690 66772 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 457620000 22273 3850 20867 41942 33734 33734 1 9606 Homo sapiens 0.08283293174645223 RACAAGTPAVIR Unmodified 1241.6663 0.66627404 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 1 3.5 0.5 1 1 32.213 32.282 3 0.00032443 6413 20230619_1883_Aki_TMTPro18x_K_F4 96.23 62.821 34635 25252 29216 30516 37992 33851 31830 33720 43801 19008 18759 16174 19425 14744 23635 18532 24507 16095 31962 23174 30254 30435 38576 33995 32809 34060 42878 19959 20447 16523 20009 15464 23975 18444 23382 15344 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42313000 22274 1331 20868 41943;41944 33735 33735 1 9606 Homo sapiens 0.05510755534078271 RACYGVLR Unmodified 993.51782 0.51781889 3494 P23396;P23396-2;Q53G83;E9PL09;Q9NQS8;A7E2S3 RPS3 40S ribosomal protein S3 yes no 0 0 1 5 0.816 1 1 1 33.396 33.456 3 0.00070505 6961 20230619_1885_Aki_TMTPro18x_K_F5 131.27 79.922 87589 93750 75921 82107 201190 687760 143370 110280 756810 70356 48861 71142 67824 63749 88507 60910 76837 63936 81058 85687 80635 91157 202700 634880 165800 151150 705710 75619 84168 71850 70027 65831 88827 61530 73541 60742 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77168000 22275 3494 20869 41945;41946;41947 33736;33737 33737 2 9606 Homo sapiens 0.020800693510750534 RADCLTQCAAR Unmodified 1320.6027 0.60268751 4203 Q8IVL6 LEPREL2 Prolyl 3-hydroxylase 3 yes yes 0 0 1 7.5 0.5 1 1 31.004 31.102 3 5.048E-05 5794 20230619_1887_Aki_TMTPro18x_K_F7 124.12 94.12 24921 17742 19408 20836 30759 30341 26931 24798 38999 17309 17509 17753 16472 12837 20937 19547 21646 14776 22983 16279 20349 20911 30957 29841 27715 25517 38126 17957 18940 17847 17064 13755 21241 19274 20657 14110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22272000 22276 4203 20870 41948;41949 33738;33739 33738 2 9606 Homo sapiens -0.04478972965307548 RADDDRFPR Unmodified 1146.553 0.55301842 3152 J9R021;Q14152;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 2 3.75 0.433 1 3 25.825 25.897 3 0.0044699 4712 20230619_1883_Aki_TMTPro18x_K_F4 94.692 73.228 28507 21798 26971 26544 31614 32382 29992 31961 37593 32633 35704 36267 35194 30255 29726 40045 46416 35691 26337 20002 27589 26500 32423 32299 30575 32687 37781 33061 36695 36463 35700 31913 31297 39811 44175 33985 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 25558000 22277 3152 20871 41950;41951;41952;41953 33740;33741;33742;33743 33743 4 9606 Homo sapiens -0.01439596587442793 RADLNQGIGEPQSPSR Unmodified 1723.8602 0.86015906 27 Q96C19;A0A024QZ77 EFHD2 EF-hand domain-containing protein D2 yes no 0 0 1 5 0 1 36.282 36.374 3 4.7429E-53 8018 20230619_1885_Aki_TMTPro18x_K_F5 247.44 224.91 29773 24245 32145 26749 30689 30842 26002 31771 34601 38696 40617 42020 46604 32179 37401 50691 49601 46841 27548 22221 32390 26888 31853 30916 26796 32555 35037 38820 41649 42192 46897 34523 38939 50381 47321 44540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84651000 22278 27 20872 41954 33744 33744 1 9606 Homo sapiens 0.02718338713225421 RADLNQGIGEPQSPSRR Unmodified 1879.9613 0.96127009 27 Q96C19;A0A024QZ77 EFHD2 EF-hand domain-containing protein D2 yes no 0 0 2 8 0 1 32.86 32.861 4 1.9404E-06 6644 20230619_1888_Aki_TMTPro18x_K_F8 107.78 91.471 14886 9512.6 10406 10676 16580 13690 12932 14152 12246 11965 14510 12730 12794 10913 13742 12705 15611 11853 13712 8728.9 11031 10731 16608 13639 13235 14360 12607 12229 14697 12838 13158 11409 14053 12696 14892 11281 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12875000 22279 27 20873 41955 33745 33745 1 9606 Homo sapiens 0.05648790415921212 RADPAELR Unmodified 926.49338 0.49337828 4002 Q53GR7;Q9UJS0;Q9UJS0-2;R4GN64;Q75M55 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes no 0 0 1 2 0 1 29.932 30.001 3 0.062398 5733 20230619_1881_Aki_TMTPro18x_K_F2 45.598 32.09 16364 16688 20939 18317 21625 22217 21013 23046 26378 23056 23183 25365 28189 22412 19828 24065 29183 24331 15190 15282 20882 18431 22373 22198 21398 23476 26444 23375 24160 25536 28213 23310 20845 24162 27798 23125 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7589400 22280 4002 20874 41956 33746 33746 1 9606 Homo sapiens 0.027191324691898444 RADQLADESLESTRR Unmodified 1745.8656 0.86563837 3682 P60880;P60880-2;A0A0A0MSS0 SNAP25 Synaptosomal-associated protein 25 yes no 0 0 2 3.5 0.5 1 1 36.979 37.027 4 3.2961E-05 8402 20230619_1882_Aki_TMTPro18x_K_F3 106.19 89.054 70283 64358 73722 61259 73867 87416 89802 79212 121050 88605 96402 86129 90973 69155 77387 89783 112120 102020 65064 58888 74552 62536 77225 86246 90532 81733 120430 89048 99732 87010 92370 73054 80911 90530 106870 96802 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73522000 22281 3682 20875 41957;41958 33747 33747 1 9606 Homo sapiens 0.022540175049925892 RADTVGLACEAINR Unmodified 1544.7729 0.77292396 3295 O75165;B3KN02 DNAJC13 DnaJ homolog subfamily C member 13 yes no 0 0 1 7 0 1 41.739 41.81 3 8.2237E-07 9993 20230619_1887_Aki_TMTPro18x_K_F7 114.59 97.561 36518 27263 35663 38992 38061 45071 38474 41005 52023 40052 43760 43539 47227 42693 43426 46208 47540 52441 33742 25062 36357 38477 39406 45000 39192 42141 51867 40670 45435 44027 47933 44252 44469 46720 45480 49724 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71842000 22282 3295 20876 41959 33748 33748 1 9606 Homo sapiens 0.022328412379692963 RAEDGSVIDYELIDQDAR Unmodified 2063.976 0.97597668 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;H0YMU9;H0YL33;H0YM50;B3KRQ1;H0YN28;H0YNP5;H0YNA0 ANXA2;HEL-S-270 Annexin A2;Annexin yes no 0 0 1 1.8 0.748 2 2 1 51.689 51.719 3 3.5689E-72 14852 20230619_1880_Aki_TMTPro18x_K_F1 334.98 310.19 242470 183730 234190 240580 270220 292360 261470 256110 295730 317850 319460 333280 331360 301100 333110 332950 342810 383540 224030 168720 239150 238930 277600 290880 265250 265790 300490 318400 327330 336450 338010 313350 339240 336920 328190 363600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3528299999.9999995 22283 368 20877 41960;41961;41962;41963;41964 33749;33750;33751;33752 33749 4 9606 Homo sapiens -0.01345227017191064 RAEEFLTASQEAL Unmodified 1463.7256 0.72562264 743 B4DSD7;E9PFR3;A0A024RD11;Q14738;A8K6Y2;Q14738-2;Q59EF0;H0Y8C4;Q14738-3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes no 0 0 1 3 0 1 55.473 55.514 3 0.0033031 16563 20230619_1882_Aki_TMTPro18x_K_F3 72.496 52.818 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22284 743 20878 41965 33753 33753 1 9606 Homo sapiens 0.012308852386013314 RAEFTVETR Unmodified 1107.5673 0.5672715 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98 FLNA Filamin-A yes no 0 0 1 5.5 1.71 1 1 1 1 1 1 34.728 34.781 3 0.00020051 7447 20230619_1885_Aki_TMTPro18x_K_F5 114.83 78.89 195010 148270 157170 171190 236370 264320 216870 217080 312390 222370 247690 283540 298540 244150 206750 299240 328210 331390 179950 135990 164100 172200 239030 259130 222600 225110 310040 226560 259500 283740 298810 256110 219050 301330 312870 314400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 493920000 22285 3484 20879 41966;41967;41968;41969;41970;41971 33754;33755 33754 2 9606 Homo sapiens 0.01779055840847832 RAEFYFQPWAQEAVCR Unmodified 2056.9578 0.95776461 119 Q96GM5;A0A024R102;A0A024R137;Q96GM5-2;F8VRQ4;A8K9I5;H0YHV1 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 0 0 1 2 0 1 57.227 57.244 3 3.1876E-08 17526 20230619_1881_Aki_TMTPro18x_K_F2 133.52 117.93 46012 34375 41019 41181 43674 47660 42908 48746 48831 47640 46718 48821 51868 42755 50749 52051 61559 50745 42485 31540 42119 41128 45149 47730 43517 49670 49348 48235 48282 49305 52726 44799 52221 52084 58720 48252 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 103300000 22286 119 20880 41972 33756;33757 33756 2 9606 Homo sapiens -0.02843595682270461 RAELDYR Unmodified 921.46683 0.46682918 1356 Q15813-2;Q15813;A0A2R8Y5Q8;A0A2R8YHI9;A0A2R8Y7E7;A0A2U3TZJ6;A0A2R8Y6Q1 TBCE Tubulin-specific chaperone E yes no 0 0 1 4.5 0.5 1 1 32.14 32.21 3 0.077686 6427 20230619_1883_Aki_TMTPro18x_K_F4 49.715 15.637 68066 45038 62576 68344 78760 87679 85694 92483 106590 69893 84276 80493 80373 70088 77814 75498 100320 79845 62822 41453 64316 67335 80758 87255 86623 93503 106370 72225 87322 80923 82080 72918 80388 76044 95623 75866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43836000 22287 1356 20881 41973;41974 33758 33758 1 9606 Homo sapiens 0.002954435778519837 RAELWDTWK Unmodified 1203.6037 0.60365701 4451 Q9BVI4;F5H303 NOC4L Nucleolar complex protein 4 homolog yes no 0 0 1 1 0 1 52.662 52.662 3 0.087568 15474 20230619_1880_Aki_TMTPro18x_K_F1 34.695 12.054 39520 35105 35694 46573 42094 50494 47760 45849 55520 41238 41138 36667 40448 34956 38948 39297 45886 41311 36533 32223 36750 46116 43416 50636 48042 47048 55506 41819 42828 37391 41251 36352 40014 39535 43805 39233 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43003000 22288 4451 20882 41975 33759 33759 1 9606 Homo sapiens 0.009999327375453504 RAELYEK Unmodified 907.47633 0.47633123 1739 A0A804HKC5;Q53GE7;Q99614;A0A804HIB8;H0YB37 TTC1 Tetratricopeptide repeat protein 1 yes no 0 0 1 6 0 1 37.055 37.123 3 0.038426 8367 20230619_1886_Aki_TMTPro18x_K_F6 64.711 20.362 117790 83446 118810 124600 161930 161160 146110 149960 190410 146420 162230 141780 152790 123910 135310 128560 181700 142490 108830 76766 121280 122880 164280 159920 149570 153820 190220 148130 167190 143570 155430 128720 140400 129940 173130 135330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61898000 22289 1739 20883 41976 33760 33760 1 9606 Homo sapiens 0.01889211863374385 RAEQEAQAPHWWR Unmodified 1663.7968 0.79677094 2259 B2R894;Q96DV4 MRPL38 39S ribosomal protein L38, mitochondrial yes no 0 0 1 7 0 1 38.476 38.54 4 0.00047161 8636 20230619_1887_Aki_TMTPro18x_K_F7 94.09 82.82 32891 24573 28050 34642 45065 45796 45639 42861 49704 39433 44623 46874 42781 38439 41008 39777 46428 44795 30360 22585 29198 34283 45455 45391 46076 43899 50171 40280 45961 46951 43657 39992 42021 40242 44358 42500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95996000 22290 2259 20884 41977 33761 33761 1 9606 Homo sapiens -0.0085755721336227 RAETACFR Unmodified 1009.4763 0.47634801 405;938 H0YLY0;A0A024R6N2;Q9Y5S2;Q86XZ8;Q6DT37;Q8IWQ7;B9EGA7;A0A0A0MRJ0;A0A0A0MRJ1;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-2;Q5VT25-6 CDC42BPB;CDC42BPG;CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK beta;Serine/threonine-protein kinase MRCK gamma;Serine/threonine-protein kinase MRCK alpha no no 0 0 1 7 0 1 28.544 28.654 3 0.047419 4899 20230619_1887_Aki_TMTPro18x_K_F7 57.598 26.525 13078 6120.7 11400 14533 14999 16324 13073 14164 20596 9971.3 13944 12792 12279 10127 9128.6 9328.6 15427 12278 12047 5683.5 11791 13986 15261 16304 13521 14509 20250 10410 14530 12772 12442 10496 9684.6 9553.2 14677 11642 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11228000 22291 405;938 20885 41978 33762 33762 1 9606 Homo sapiens -0.028011114082687527 RAEVNGLAAQGK Unmodified 1212.6575 0.65748349 26 A0A024QZ64;P09972;B7Z1Y2;B7Z3K9;B7Z1N6;B7Z3K7;A8MVZ9;B7Z1Z9;B7Z1L5 ALDOC Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C yes no 0 0 1 8 0 1 37.161 37.146 3 0.00044563 8331 20230619_1888_Aki_TMTPro18x_K_F8 100.38 69.191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22292 26 20886 41979 33763 33763 1 9606 Homo sapiens 0.05966105169250113 RAEYFDGSEPVQNR Unmodified 1666.7699 0.76994707 4090 Q68CN2;Q71SV8;Q9HCS7 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 yes no 0 0 1 3 0.816 1 1 1 37.564 37.617 3 3.4521E-16 8569 20230619_1883_Aki_TMTPro18x_K_F4 159.18 152.88 46236 38840 43276 45258 54726 61776 53314 49594 61027 62810 65833 71399 70831 62927 61223 69397 73459 69901 42738 35611 44396 45391 55925 60940 54068 51862 61955 63044 67570 71781 71701 65514 63143 69647 70142 66400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192630000 22293 4090 20887 41980;41981;41982 33764 33764 1 9606 Homo sapiens -0.036767106151955886 RAFDSAVAK Unmodified 963.51378 0.51377937 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 0 1 8 0 1 38.952 38.939 3 0.0010316 9050 20230619_1888_Aki_TMTPro18x_K_F8 99.788 55.411 99752 93811 142990 89729 208360 204710 133620 147580 257080 36663 31071 37135 35689 28383 61664 38242 47503 32944 92655 85833 142260 92578 209200 197040 142750 151600 245280 43519 42777 37461 37616 30087 61327 38054 45487 31400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37234000 22294 3954 20888 41983 33765 33765 1 9606 Homo sapiens 0.030563031289943865 RAFEYEIR Unmodified 1082.5509 0.55089316 3282 O60566-3;O60566;O60566-2 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes no 0 0 1 6 0 1 40.283 40.375 3 0.007755 9675 20230619_1886_Aki_TMTPro18x_K_F6 85.731 53.796 67180 51152 59770 56360 53973 75952 62335 61657 86107 72615 80937 72114 86514 69477 61543 85361 77835 68086 62036 46893 61243 56766 56939 74960 63108 64256 86117 72843 83425 73200 86916 72586 64049 84498 74247 64887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34301000 22295 3282 20889 41984 33766 33766 1 9606 Homo sapiens 0.012919746747456884 RAFGSGYR Unmodified 912.4566 0.45659884 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;F8VX11;F8VP89 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 1 4.5 0.5 1 1 30.252 30.323 3 0.01099 5807 20230619_1885_Aki_TMTPro18x_K_F5 74.2 55.394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22296 2578 20890 41985;41986 33767;33768 33768 2 9606 Homo sapiens -0.0031311935672420077 RAFIITGQTYTR Unmodified 1425.7728 0.7728476 914 P30566;A0A7P0T9A7;A0A7P0Z472;A0A096LNY6;X5D8S6;A0A1B0GTJ7;A0A1B0GWJ0;B4DP46;A0A0A6YY92;Q71UA4;A0A7P0T8E4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;X5D2Z4;X5DP48;P30566-2;A8K4X6;A0A096LP92;B4DUM2;A0A096LPA2 ADSL Adenylosuccinate lyase yes no 0 0 1 7.5 0.5 1 1 43.401 43.446 3 0.00016448 10684 20230619_1887_Aki_TMTPro18x_K_F7 105.6 80.277 58878 45755 55603 57204 56955 56146 63427 63697 69826 64454 60125 64199 67318 51563 66689 76472 72102 61695 54401 41993 56780 56833 59180 57048 63778 64572 70400 65080 62505 64771 68422 54924 68174 75594 68862 58793 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151840000 22297 914 20891 41987;41988 33769 33769 1 9606 Homo sapiens 0.07699209300290022 RAFLIEEQK Unmodified 1132.6241 0.6240581 1905 P49207;A1LUY1;Q5MK14 RPL34 60S ribosomal protein L34 yes no 0 0 1 7.5 0.5 1 1 44.819 44.876 3 2.4536E-06 11231 20230619_1887_Aki_TMTPro18x_K_F7 178.84 115.63 939840 617650 713920 833830 733100 943500 816920 945160 1076400 967130 668390 777910 1403200 940510 586020 1667600 1464400 1481000 866250 567730 745150 825530 764340 945210 826870 965450 1066900 970970 736900 805310 1369500 1004500 664680 1649900 1392700 1408600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1475399999.9999998 22298 1905 20892 41989;41990 33770;33771 33770 2 9606 Homo sapiens 0.06305103397380662 RAFQLEEGEETEPDCK Unmodified 1936.8473 0.84727069 3565 P38432 COIL Coilin yes yes 0 0 1 2 0 1 44.453 44.536 3 2.609E-07 11945 20230619_1881_Aki_TMTPro18x_K_F2 121.03 100.37 44472 33224 40439 46745 36021 35683 43748 42304 34670 48619 47261 43741 62382 44875 33394 72922 59587 58003 41069 30536 41380 45944 37918 37081 43408 42951 36412 48614 48505 44741 61775 47757 36132 71865 56749 55256 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118330000 22299 3565 20893 41991 33772 33772 1 9606 Homo sapiens -0.08367905251839147 RAFVHWYVGEGMEEGEFSEAR Oxidation (M) 2501.107 0.10700763 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;B4DN58;Q15670;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;C9J2C0;Q9NY65-2;Q9NY65 TUBA1B;TUBA4A;TUBA1A;TUBA1C;TUBA2;TUBA8 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain no no 0 1 1 5 0 1 49.729 49.805 4 1.3112E-05 13674 20230619_1885_Aki_TMTPro18x_K_F5 95.307 87.734 42758 34054 35470 39876 42242 47779 46011 43855 45216 37055 40403 45007 43386 42140 37487 44245 42146 47683 39475 31231 36772 39896 43458 47624 46139 44902 45897 38073 41845 45232 43946 43649 38520 44606 40319 45233 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75987000 22300 2408;3747;4144 20894 41992 33773 33773 1483 1 9606 Homo sapiens -0.08350159640849597 RAGDELAYNSSSACASSR Unmodified 1900.8334 0.83335196 2602 B4DVQ4;Q86Y37-4;Q86Y37 CACUL1 CDK2-associated and cullin domain-containing protein 1 yes no 0 0 1 4.5 0.5 1 1 34.187 34.256 3 4.4113E-31 7271 20230619_1885_Aki_TMTPro18x_K_F5 240.41 232.07 21997 16854 18204 17739 14622 17798 19704 19817 20877 24244 26402 20520 29004 19751 18758 32372 27183 21948 20303 15444 18753 17858 15629 18043 19619 20220 21432 24143 26888 21018 29003 21076 19794 31703 25891 20976 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44580000 22301 2602 20895 41993;41994 33774;33775 33775 2 9606 Homo sapiens -0.08103137960279128 RAGELTEDEVER Unmodified 1402.6688 0.66883604 3710 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 1 1.5 0.5 1 1 34.388 34.416 3 9.1912E-18 7699 20230619_1880_Aki_TMTPro18x_K_F1 220.4 184.67 427960 346820 376240 401270 435030 485520 449310 453710 514510 537420 526010 546500 579120 496280 445780 933530 293600 601730 395310 318010 387550 401940 447830 483900 454250 467850 521240 538920 541460 553590 582830 536090 450190 910950 284520 573910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7408999999.999999 22302 3710 20896 41995;41996 33776;33777 33776 2 9606 Homo sapiens -0.016391623179288217 RAGFVPVYLR Unmodified 1176.6768 0.67676237 4491 Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 yes no 0 0 1 8 0 1 46.339 46.377 3 0.026016 12039 20230619_1888_Aki_TMTPro18x_K_F8 56.209 21.677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22303 4491 20897 41997 33778 33778 1 9606 Homo sapiens 0.09549106250847217 RAGGEESQFEMDI Oxidation (M) 1483.6249 0.62492232 3857 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 0 1 1 1 0 1 45.565 45.565 2 0.0056727 12511 20230619_1880_Aki_TMTPro18x_K_F1 72.275 66.171 93908 74356 73191 92635 76014 76422 75660 77404 80402 99141 113340 117080 102960 96404 108610 132430 113500 122790 86658 68235 76208 91819 78720 78570 76512 79639 83012 99525 114330 117380 105730 101960 110760 131890 108610 116690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334330000 22304 3857 20898 41998 33779 33779 2533 1 9606 Homo sapiens -0.097545148065592 RAGGEESQFEMDI Unmodified 1467.63 0.63000769 3857 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 0 0 1 1.5 0.5 1 1 50.998 51.021 2 0.00039309 14896 20230619_1881_Aki_TMTPro18x_K_F2 121.8 108.03 273930 221950 246670 248530 157170 207380 218180 214980 235950 317580 302570 338310 346900 291900 315590 379130 331330 384000 253070 203450 251510 248400 172320 213040 217220 221950 242400 315920 309510 340830 351100 307260 322710 379660 317230 364480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1061299999.9999999 22305 3857 20898 41999;42000 33780;33781 33781 2 9606 Homo sapiens -0.08510210943927632 RAGGEPSVESGR Unmodified 1200.5847 0.58471248 1284 A0A1C7CYX9;Q59GB4;A9CQZ4 DPYSL2 yes no 0 0 1 3 0 1 23.054 23.206 3 0.0016087 3792 20230619_1882_Aki_TMTPro18x_K_F3 66.784 48.039 146970 102350 191090 177000 204850 194580 186580 186000 212000 170240 203420 184270 190240 162450 182060 138500 226100 189860 136110 94346 190520 172780 210850 195200 190050 190210 214060 173400 208410 185680 194230 167110 187430 142610 215660 179920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118670000 22306 1284 20899 42001 33782 33782 1 9606 Homo sapiens -0.007556486241583116 RAGGEPSVESGRK Unmodified 1328.6797 0.6796755 1284 A0A1C7CYX9;Q59GB4;A9CQZ4 DPYSL2 yes no 0 0 2 6 0 1 28.443 28.475 4 0.014152 5243 20230619_1886_Aki_TMTPro18x_K_F6 67.964 38.028 16817 6994 15979 22295 16859 15705 15019 16720 19465 17699 23845 31067 30082 23719 15754 17582 41655 42277 15496 6542.2 16346 21132 17380 16384 15402 17057 19748 18238 24559 30643 29836 24426 17706 19137 39609 39891 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17283000 22307 1284 20900 42002 33783 33783 1 9606 Homo sapiens 0.028482848470275712 RAGGPEGPPWLPR Unmodified 1388.7313 0.73131714 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 1 3 0 1 45.111 45.186 3 0.022008 11912 20230619_1882_Aki_TMTPro18x_K_F3 55.335 38.762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22308 307 20901 42003 33784 33784 1 9606 Homo sapiens 0.05250073331603744 RAGLNEMVEYITHSR Unmodified 1774.8785 0.87845166 743 B4DSD7;E9PFR3;A0A024RD11;Q14738;Q14738-2;Q59EF0;H0Y8C4;Q14738-3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes no 0 0 1 2 0 1 53.449 53.477 4 1.6604E-18 15925 20230619_1881_Aki_TMTPro18x_K_F2 150.12 131.07 14072 15321 16712 17889 12860 18222 18531 19227 23708 18917 19839 21273 20912 18136 21256 23920 17275 22180 13059 14036 16714 17864 13846 18415 18517 19565 23685 19213 20598 21389 21324 19111 21407 23840 16601 21067 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113320000 22309 743 20902 42004 33785 33785 1 9606 Homo sapiens 0.02200757363584671 RAGPGSEELTVTNAR Unmodified 1556.7907 0.79068251 732 B4DMA8;B4E063;A0A1U9X7Y0;A0A024RCS7;Q9BW19 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 yes no 0 0 1 5 0 1 34.802 34.89 3 1.7039E-05 7503 20230619_1885_Aki_TMTPro18x_K_F5 109.48 89.639 17958 13275 16565 15754 17117 20966 17155 22349 21186 19489 22743 18381 22623 18064 19947 20445 24627 21851 16585 12179 16948 15783 17763 20830 17438 22634 21410 19815 23222 18722 22960 18780 20590 20586 23498 20749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18715000 22310 732 20903 42005 33786 33786 1 9606 Homo sapiens 0.03455879764464953 RAGTCCANCQTTTTTLWR Unmodified 2156.9514 0.95137538 1802 A0A8Q3SJG7;A0A8Q3WLD0;P23769 GATA2 Endothelial transcription factor GATA-2 yes no 0 0 1 5 0 1 38.965 39.056 3 0.0011186 9136 20230619_1885_Aki_TMTPro18x_K_F5 67.685 64.244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22311 1802 20904 42006 33787 33787 1 9606 Homo sapiens -0.08082224967665752 RAGTSCANCQTTTTTLWR Unmodified 2083.9528 0.95275559 3497 P23771;P23771-2 GATA3 Trans-acting T-cell-specific transcription factor GATA-3 yes no 0 0 1 5 0 1 38.374 38.466 3 5.248799999999999E-19 8907 20230619_1885_Aki_TMTPro18x_K_F5 187.39 162.44 5357 6298.8 6960.6 7707.5 8936.7 7701.6 9133.2 10929 11315 7277.6 9069.4 8830.2 9140.8 9907 7919.8 6734.4 10206 10322 4979.2 5771.9 6970.6 7671.7 9111.8 7866.7 9265.7 10838 11299 7603.1 9411.2 8931.4 9286.2 10012 8193.8 7025.2 9743.5 9765.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15985000 22312 3497 20905 42007 33788 33788 1 9606 Homo sapiens -0.0458626760723746 RAGWQCPECK Unmodified 1290.5598 0.55976006 1709 A0A7P0TAI3;Q8NEZ4;Q8NEZ4-2;Q8NEZ4-3 KMT2C Histone-lysine N-methyltransferase 2C no no 0 0 1 8 0 1 37.276 37.262 3 0.043557 8377 20230619_1888_Aki_TMTPro18x_K_F8 50.791 30.685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22313 1709 20906 42008 33789 33789 1 9606 Homo sapiens -0.07389743022713446 RAIELATTLDESLTNR Unmodified 1801.9534 0.95339074 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;D6RAP7 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 1 7 0 1 57.383 57.439 3 1.3637E-42 16723 20230619_1887_Aki_TMTPro18x_K_F7 276.14 241.18 90956 79987 92250 93830 84243 95963 92919 86826 97621 108330 103520 109030 126800 93482 97482 126580 113140 123910 84154 73330 93490 93667 88381 96685 93364 89944 99519 108330 106970 110130 127190 98760 100670 126430 108170 117680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153170000 22314 2297 20907 42009 33790 33790 1 9606 Homo sapiens 0.08449218375790224 RAIETTDVTR Unmodified 1160.6149 0.61494998 4374 Q96K76-4;B3KRV9;Q96K76-2;Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 1 5 0 1 31.665 31.745 3 0.038759 6327 20230619_1885_Aki_TMTPro18x_K_F5 53.569 25.556 14708 11453 16289 13197 18729 17635 15644 19830 22407 18502 19800 19420 20184 15278 18932 16944 22128 21473 13608 10503 16427 13257 19162 17555 16175 20050 22334 18799 20450 19530 20519 16001 19437 17260 21136 20349 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6251100 22315 4374 20908 42010 33791 33791 1 9606 Homo sapiens 0.041067100410373314 RAIGNIELGIR Unmodified 1210.7146 0.71460444 630 A0A024RAM4;P46821;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RGJ3;D6RCL2 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 1 3 0 1 45.51 45.586 3 0.00018425 12113 20230619_1882_Aki_TMTPro18x_K_F3 114.76 59.338 101040 80739 92634 101920 90461 107850 95052 104240 116090 88119 85798 81116 78448 68907 91098 91831 96759 85938 93349 74100 94824 101260 94375 108500 96254 106300 115800 89750 89133 82297 80942 72684 92725 91584 92449 81726 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234650000 22316 630 20909 42011 33792 33792 1 9606 Homo sapiens 0.11767572445637597 RAIPNQVIR Unmodified 1065.6407 0.64071122 3619 P50570-3;P50570-2;K7EMQ3;B4DJ53;A0A024R7C9;Q9UPH5 DNM2 Dynamin-2 yes no 0 0 1 5 0 1 34.525 34.612 3 0.0091906 7400 20230619_1885_Aki_TMTPro18x_K_F5 69.954 52.089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22317 3619 20910 42012 33793 33793 1 9606 Homo sapiens 0.11051649073965564 RAIYQATYR Unmodified 1140.604 0.60399136 3517 P28074;A0A140VJS7;P28074-3 PSMB5 Proteasome subunit beta type-5 yes no 0 0 1 5 0 1 34.476 34.563 3 0.00045087 7387 20230619_1885_Aki_TMTPro18x_K_F5 101.97 80.511 105110 92516 96539 94351 128380 225180 112110 135020 568950 73239 62766 72526 90188 74018 67798 105200 103850 87142 97177 84711 99348 96805 132120 215470 127530 142330 531850 78621 89226 73810 90423 77937 71522 104090 98902 83021 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53065000 22318 3517 20911 42013 33794;33795 33795 2 9606 Homo sapiens 0.03931352457425419 RALADTENLR Unmodified 1157.6153 0.61528433 4543 Q9HAV7;B4DWV5 GRPEL1 GrpE protein homolog 1, mitochondrial;GrpE protein homolog yes no 0 0 1 4.5 0.5 1 1 35.04 35.108 3 5.7394E-05 7573 20230619_1885_Aki_TMTPro18x_K_F5 139.15 44.744 177110 111240 106120 155230 121130 138420 127860 150330 215870 207190 225540 265230 249990 232920 110740 342160 341910 306080 162990 102310 114210 152840 125220 141490 131270 154270 215310 208140 232010 265630 248170 246890 129080 339320 324660 291230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 339940000 22319 4543 20912 42014;42015 33796;33797 33797 2 9606 Homo sapiens 0.04278129760882621 RALANSLACQGK Unmodified 1287.6718 0.67175335 3378 P04075;V9HWN7;J3KPS3;P04075-2;A0A0M4FNU3;H3BR68 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 1 4.2 0.748 1 2 2 40.047 40.112 3;4 7.3123E-07 9618 20230619_1883_Aki_TMTPro18x_K_F4 146.58 118.25 608690 441480 568560 553030 628880 691800 585070 654100 845690 575440 593830 535580 600340 417170 695370 692990 653530 545120 562130 405310 581640 551250 647870 688090 600590 668390 836020 585050 621200 542160 616500 449040 703070 683690 624950 519720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4590700000 22320 3378 20913 42016;42017;42018;42019;42020 33798;33799 33798 2 9606 Homo sapiens 0.0394243432588155 RALDDTAR Unmodified 916.47264 0.47264284 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 LMNB1 Lamin-B1 yes no 0 0 1 2.75 0.829 2 1 1 23.927 24.019 3 0.002147 3834 20230619_1882_Aki_TMTPro18x_K_F3 98.009 38.764 191370 107020 259890 244370 362160 315480 230430 277800 302000 242670 325770 352010 234390 260470 328090 132140 352730 302450 177130 99199 259570 236190 363840 312710 242460 285350 304370 250510 329440 348830 247000 264820 332200 145080 336910 285650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 168730000 22321 3482 20914 42021;42022;42023;42024 33800;33801;33802 33802 3 9606 Homo sapiens 0.011065420895192801 RALEQQVEEMK Unmodified 1359.6816 0.68164933 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 1 5.5 0.5 1 1 47.266 47.345 3 4.9819E-17 12627 20230619_1885_Aki_TMTPro18x_K_F5 190.35 140.21 187510 141300 190980 181300 189360 239060 221030 233430 284800 273600 258420 272270 305580 229880 248050 321320 276260 275680 173330 129730 193690 180600 197980 237110 223010 239800 285560 274330 268480 275050 307470 243430 255210 318660 264050 262330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165030000 22322 148 20915 42025;42026 33803 33803 1 9606 Homo sapiens 0.016195775406231405 RALERDPTEDDVESK Unmodified 1758.8384 0.83842057 459 A0A024R7K7;A0A024R7M6;Q86YP4-2;Q86YP4;Q86YP4-3;V9GYX5;C9JVY3;V9GY85;H7C3H1;C9JMI3;C9JGN4;C9JJK9 GATAD2A Transcriptional repressor p66-alpha yes no 0 0 2 1.5 0.5 1 1 36.815 36.844 4 2.4602E-07 8433 20230619_1881_Aki_TMTPro18x_K_F2 124.25 115.43 23701 19215 20570 24877 30165 31292 25730 30852 34052 28561 32257 30479 33306 28051 27584 34735 37125 32320 21890 17639 21324 24734 30462 31145 26464 31466 34138 29056 33205 30796 33696 29365 28714 34643 35396 30741 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38736000 22323 459 20916 42027;42028 33804 33804 1 9606 Homo sapiens -0.010645108259950575 RALIQCAK Unmodified 958.53822 0.53821998 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4DKC9;B4DTM7 VCL;HEL114 Vinculin yes no 0 0 1 4.5 0.5 1 1 37.954 38.021 3 0.0046272 8702 20230619_1885_Aki_TMTPro18x_K_F5 109.01 63.332 53061 47032 48526 46624 90426 97587 81082 86845 112760 26474 29584 26950 26487 21192 38819 38102 41561 22644 49055 43053 50306 47813 90405 94560 83168 87768 109490 30172 34138 27241 27765 22922 39397 37158 39608 21740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43852000 22324 51 20917 42029;42030 33805 33805 1 9606 Homo sapiens 0.05729240010862213 RALQGDYDQSR Unmodified 1307.6218 0.62182627 1944 A4D218;Q9Y6D9;Q9Y6D9-4;Q9Y6D9-3 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes no 0 0 1 4 0 1 31.373 31.436 3 0.00053883 6113 20230619_1883_Aki_TMTPro18x_K_F4 96.059 69.352 17342 15338 20972 19481 23002 27145 22740 23846 29651 26701 25360 27509 24159 22452 25150 26969 29699 32159 16072 14072 21026 19435 23740 26784 23160 24654 29645 26864 26186 27706 24764 23567 25819 27312 28389 30481 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19777000 22325 1944 20918 42031 33806 33806 1 9606 Homo sapiens -0.019679770784023276 RALVFQPVAELK Unmodified 1369.8082 0.80817048 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162;Q7KYX9;A0A0S2Z4A8;Q7Z683 PFKM;DKFZp779O048 ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 1 4 0 1 53.915 53.93 3 1.9943E-08 15773 20230619_1883_Aki_TMTPro18x_K_F4 134.18 77.619 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22326 116 20919 42032 33807 33807 1 9606 Homo sapiens 0.13805871828071759 RALVILAK Unmodified 882.60147 0.60147217 4402 V9HWC2;Q99497;K7ELW0 HEL-S-67p;PARK7 Protein deglycase DJ-1 yes no 0 0 1 7 0.816 1 1 1 47.391 47.466 3 0.00010133 12495 20230619_1888_Aki_TMTPro18x_K_F8 129.47 65.986 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22327 4402 20920 42033;42034;42035 33808;33809;33810 33810 3 9606 Homo sapiens 0.1554754879042548 RAMDLVQEEFLQR Unmodified 1633.8246 0.82462518 4544 Q9HB07;F8VR84;Q8WYI2;F8VQQ3;Q96CT6 C12orf10;MST024 UPF0160 protein MYG1, mitochondrial yes no 0 0 1 6 0 1 55.406 55.483 3 1.5399E-06 16273 20230619_1886_Aki_TMTPro18x_K_F6 109.92 96.716 61380 47905 53210 60087 54558 69684 68136 61968 92133 71135 61634 66768 72606 71678 61397 83712 68074 75318 56678 43967 54814 59793 57061 69534 68602 64098 91247 71347 65178 68148 73312 74360 63126 83400 65118 71600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109260000 22328 4544 20921 42036 33811 33811 1 9606 Homo sapiens 0.0330658493185183 RANEFLEVGK Unmodified 1161.6142 0.6142217 3152 J9R021;Q14152;Q24JU4;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 7.5 0.5 1 1 45.413 45.47 3 0.00019871 11478 20230619_1887_Aki_TMTPro18x_K_F7 120.03 77.29 1150300 850510 1061400 1214600 1172200 1338500 1235300 1184600 1480700 1576700 1515400 1559600 1783100 1399400 1378200 1785100 1783200 1712900 1062300 781870 1088300 1197700 1211400 1340200 1249400 1231500 1497100 1572000 1564800 1578600 1791700 1469700 1433100 1782400 1701800 1628000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1006399999.9999999 22329 3152 20922 42037;42038 33812;33813 33812 2 9606 Homo sapiens 0.039879153919855526 RANENSNIQVLSER Unmodified 1628.823 0.82304527 1861 Q6UN15;A0A994J3L0;A0A994J3K5;A0A994J3M0;A0A994J3Q0;A0A994J442;A0A994J3S6;A0A994J6N5;A0A994J3S0;A0A994J453;A0A994J474;A0A994J464;A0A994J6R0;A0A994J458;A0A994J3I9;A0A994J469;A0A994J6C6;A0A994J6D6;A0A994J3L5;A0A994J6B4;A0A994J6P0;A0A994J6Q2;A0A994J3R0;A0A994J3J1;A0A994J6Q5;A0A994J6B8;A0A994J3K1;A0A994J3R5;Q6UN15-4;H0Y8P7;A0A994J6P3;A0A994J6E0;A0A994J6D3;A0A994J3P6;A0A994J3Q5;A0A994J438;A0A994J6E2;Q6UN15-3;Q6UN15-5;A0A994J6P8;A0A994J6C9;B4DTW7;A0A994J3T5 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes no 0 0 1 5 0 1 36.15 36.242 3 2.8122E-09 7970 20230619_1885_Aki_TMTPro18x_K_F5 159.41 127.25 16550 12124 18548 18283 18988 20591 18186 19530 19368 17410 20763 19046 19637 17081 21671 20647 20975 20568 15309 11153 18678 17983 19657 20615 18433 19966 19712 17761 21183 19210 20174 17870 21957 20691 20073 19538 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52345000 22330 1861 20923 42039 33814 33814 1 9606 Homo sapiens 0.033786671674533864 RANPQVGVAFPHIK Unmodified 1532.8576 0.85758029 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 1 5.5 0.5 1 1 44.746 44.829 4 1.2282E-05 11448 20230619_1885_Aki_TMTPro18x_K_F5 117.93 75.932 174420 117960 147340 175520 138270 177060 160520 187240 250240 201730 210930 305010 299650 274560 138170 432470 402410 401380 160900 108530 151980 172470 145380 179030 163370 190970 248210 206350 222520 304080 295840 292330 159550 429330 382460 381560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 834640000 22331 3444 20924 42040;42041 33815 33815 1 9606 Homo sapiens 0.11246579836870296 RANVVTTPSTNR Unmodified 1314.7004 0.70041094 4207 Q8IWZ3-6;Q8IWZ3-4;Q8IWZ3;E9PDP5;H0Y4P6;H0Y472;H0Y785 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 yes no 0 0 1 3 0 1 28.903 29.005 3 0.014459 5233 20230619_1882_Aki_TMTPro18x_K_F3 65.295 51.616 6287.8 2834.6 4201.7 3507.6 5626.9 5340.5 4408.2 6822.9 6930.3 5053.6 4891.3 7601.2 8281.2 6687.2 4706.5 6401.8 8830.6 10013 5781.9 2608.7 4456.5 3515.4 5703.6 5295.8 4597.9 6810.2 6837 5280.4 5276.6 7562.3 8177.4 6919.2 5085.1 6633.9 8417.4 9467.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4115300 22332 4207 20925 42042 33816 33816 1 9606 Homo sapiens 0.05564875226696131 RAPAAEPSPAAAPAGR Unmodified 1488.7797 0.77972389 3843 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 yes yes 0 0 1 6.5 0.5 1 1 30.581 30.648 3 2.0114E-08 5598 20230619_1887_Aki_TMTPro18x_K_F7 118.75 105.34 13247 8739.1 12405 13091 21664 23572 18207 16572 23094 16737 38557 39802 17595 32725 31718 16957 39585 36646 12228 8042.4 12816 12987 21684 22873 18708 17427 23787 17627 37936 39100 19418 33084 32356 18452 37778 34608 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46454000 22333 3843 20926 42043;42044 33817;33818 33818 2 9606 Homo sapiens 0.05488522180826294 RAPDQAAEIGSR Unmodified 1269.6426 0.64256171 100 Q0VAB1;A0A024R0M6;Q3ZCQ8;Q3ZCQ8-2;M0R1Y4;M0R003;M0QXC3;M0R2Z3;M0R303;M0R2D2 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 yes no 0 0 1 4 0.816 1 1 1 31.089 31.165 3 1.6549E-05 5975 20230619_1883_Aki_TMTPro18x_K_F4 124.51 98.385 81754 70275 81143 84747 97478 94276 84590 87998 106300 98552 132380 131830 120410 109090 114860 119290 134690 130130 75615 64449 82719 84529 99544 94514 86756 90626 108050 100060 134060 131570 123050 113770 118010 120320 128650 123500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174600000 22334 100 20927 42045;42046;42047 33819;33820 33820 2 9606 Homo sapiens 0.01852613301252859 RAPEEELPPLDPEEIRK Unmodified 2017.048 0.04801941 864 A0A087WZ13;E9PAU2;Q8IY67-2;Q8IY67;K7EKR9;Q8IY67-3 RAVER1 Ribonucleoprotein PTB-binding 1 yes no 0 0 2 4 0 1 49.171 49.208 4 0.010207 13625 20230619_1883_Aki_TMTPro18x_K_F4 66.893 53.23 89973 81489 91769 95919 88600 104710 85858 98064 113220 98447 103710 111300 112470 107430 95739 120930 124810 118370 83265 74703 93043 95812 92307 105060 87638 100630 113390 99908 107270 112290 113830 111590 99388 121100 119100 112480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118010000 22335 864 20928 42048 33821 33821 1 9606 Homo sapiens 0.08017732127154886 RAPELYR Unmodified 903.49265 0.49265 2113 B5MC98;A8K813;Q9HCU5;F8WCS5 PREB Prolactin regulatory element-binding protein yes no 0 0 1 7.5 0.5 1 1 32.64 32.683 3 0.014274 6575 20230619_1888_Aki_TMTPro18x_K_F8 93.561 57.365 62031 44263 57254 67826 75956 75696 70533 81262 73815 66643 78820 91445 74744 67773 86975 61677 93804 79292 57276 40731 58893 66631 77210 76058 71564 82219 75194 68860 80580 90836 77029 70353 88452 63159 89585 75178 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83039000 22336 2113 20929 42049;42050 33822 33822 1 9606 Homo sapiens 0.03704337820136061 RAPFDLFENK Unmodified 1235.6299 0.62987176 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 1 3.67 3.09 1 1 1 54.51 54.541 3 3.3264E-07 16366 20230619_1881_Aki_TMTPro18x_K_F2 179.46 141.06 6745700 5480100 6035300 6296100 5750600 6540500 6730500 6327100 7240600 7213400 6903100 5970600 7429100 5672100 6996400 8771900 6492100 6561800 6231800 5024500 6187500 6296400 6025100 6591500 6745500 6503200 7336300 7205500 7116100 6115300 7539900 6025400 7104500 8636100 6217000 6255600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 19623000000 22337 751 20930 42051;42052;42053 33823;33824;33825;33826 33825 4 9606 Homo sapiens 0.021482019090399262 RAPFDLFENKK Unmodified 1363.7248 0.72483478 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q58FF7 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 0 0 2 3.33 0.471 2 1 50.623 50.68 3;4 0.00026183 14403 20230619_1882_Aki_TMTPro18x_K_F3 122.55 86.883 1750000 1559000 1756400 1762900 1451100 1611600 1695900 1681200 1754300 2212700 2103000 1957600 2160000 1750300 1939600 2394900 2074500 2055100 1619100 1428700 1779000 1762400 1537800 1643500 1698700 1727100 1800000 2198900 2142800 1992600 2191500 1846500 1986300 2376000 1983500 1955600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9458200000 22338 751 20931 42054;42055;42056 33827;33828 33827 2 9606 Homo sapiens 0.05752135380225809 RAPFDLFENR Unmodified 1263.636 0.63601977 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 1 3.67 3.09 1 1 1 51.31 51.351 3 5.2754E-06 14038 20230619_1888_Aki_TMTPro18x_K_F8 145.75 111.37 574150 471350 519470 599320 506850 635270 618230 586580 683790 589780 549740 530690 583540 498200 649950 638570 580590 575790 530490 432580 532670 595070 531200 638310 618780 602860 687410 594340 571980 540540 597650 522370 655860 636020 556140 547570 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5626900000 22339 3177 20932 42057;42058;42059 33829;33830;33831 33831 3 9606 Homo sapiens 0.014747201405725718 RAPFDLFENRK Unmodified 1391.731 0.73098279 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 2 3.5 0.5 2 2 65.214 65.283 4 0.00031462 12917 20230619_1883_Aki_TMTPro18x_K_F4 113.07 87.874 4178500 3542800 3754200 4037000 3975700 4219100 4058400 4165500 4468500 4723100 4506300 3994700 4638500 3646800 4170800 5366600 4886900 4505200 3861300 3247600 3853400 4039800 4114200 4253000 4101200 4273500 4533600 4720700 4624000 4080200 4706400 3865000 4295500 5313400 4666200 4289600 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 9020800000 22340 3177 20933 42060;42061;42062;42063 33832;33833;33834;33835;33836 33835 5 9606 Homo sapiens 0.05078653611735717 RAPLRPEVPEIQECPIAQESLESQEQR Unmodified 3188.5884 0.58842424 4530 Q9H840 GEMIN7 Gem-associated protein 7 yes yes 0 0 2 4 0 1 50.27 50.302 4 1.6859E-38 14137 20230619_1883_Aki_TMTPro18x_K_F4 202.15 194.44 18825 15723 18525 20161 18882 20791 18120 17771 19553 21035 22017 22253 23988 15001 22314 26686 22709 24857 17407 14430 18856 19999 19565 20908 18369 18458 19951 21114 22563 22300 24302 16352 22767 26509 21739 23621 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80605000 22341 4530 20934 42064 33837 33837 1 9606 Homo sapiens 0.08167356085232313 RAPPPAVAAR Unmodified 1004.5879 0.58794737 4133 Q6SPF0 SAMD1 Atherin yes yes 0 0 1 2 0 1 27.448 27.525 3 0.064542 4848 20230619_1881_Aki_TMTPro18x_K_F2 44.309 13.739 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22342 4133 20935 42065 33838 33838 1 9606 Homo sapiens 0.08583691011165229 RAPQCYPSSVNSAR Unmodified 1591.7525 0.75252287 4536 Q9H9A5-4;Q9H9A5-3;Q9H9A5-2;Q9H9A5;Q9H9A5-6;H7C0K1;E9PCN5;Q9H9A5-5 CNOT10 CCR4-NOT transcription complex subunit 10 yes no 0 0 1 2.5 0.5 1 1 31.808 31.878 3 3.7109000000000005E-29 6310 20230619_1882_Aki_TMTPro18x_K_F3 227.47 204.07 21758 16519 21881 22475 21491 25990 26775 24318 31233 29022 30628 28823 30301 23572 24664 28215 37400 31795 20111 15176 22222 22251 22516 25966 26821 25089 31533 29078 31418 29092 30667 24753 25898 28468 35622 30181 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39141000 22343 4536 20936 42066;42067 33839 33839 1 9606 Homo sapiens -0.019683294218339142 RAQAEQAALR Unmodified 1112.6051 0.60505399 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 1 6 0 1 28.537 28.569 3 6.0393E-06 5279 20230619_1886_Aki_TMTPro18x_K_F6 135.56 95.64 26146 18998 23826 21511 45801 47862 40924 45138 68726 16603 14073 17850 13755 12046 24833 13600 20589 12241 24142 17424 24720 21872 45741 46327 42337 45488 66100 18448 17039 17869 14606 12693 24756 13606 19682 11671 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17936000 22344 3921 20937 42068 33840 33840 1 9606 Homo sapiens 0.053255668262863765 RAQAWCYSK Unmodified 1168.5448 0.54476192 1257 A0A158RFU6;P51149;A0A6Q8PG52;A0A6Q8PH84;C9J8S3;A0A6Q8PGE6;B4DPH9;C9J592;C9J4V0 RAB7A Ras-related protein Rab-7a yes no 0 0 1 4.5 0.5 1 1 39.544 39.61 3 0.0001625 9384 20230619_1883_Aki_TMTPro18x_K_F4 133.75 88.384 141770 156240 114650 111880 250110 516170 191370 187620 484200 49822 46517 63418 56133 48166 60336 58470 65136 69550 131170 142600 121070 121740 250150 483110 204800 210380 457830 59474 68753 63318 57438 50738 61533 59216 62306 65925 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 151110000 22345 1257 20938 42069;42070 33841;33842 33841 2 9606 Homo sapiens -0.032768668284461455 RAQEEAEAEER Unmodified 1316.5957 0.5956711 3237 O15240 VGF Neurosecretory protein VGF;Neuroendocrine regulatory peptide-1;Neuroendocrine regulatory peptide-2;Antimicrobial peptide VGF[554-577] yes yes 0 0 1 1 0 1 26.901 26.901 3 0.012445 4782 20230619_1880_Aki_TMTPro18x_K_F1 67.252 35.243 6901.1 2502.9 5964.3 6924.9 1795.8 2006.3 4232.7 6859.9 3645.4 5506.9 4947 10612 8737.3 5424 5889.6 5459.2 4889 4777.6 6351.9 2335.8 6078.1 6562.1 2261.1 2505 4122.9 6637.5 3809.3 5775.6 5217.7 10340 8644.1 5769.7 5980.8 5451.9 4686.7 4545.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9009800 22346 3237 20939 42071 33843 33843 1 9606 Homo sapiens -0.04996291040538381 RAQEEAERLEADR Unmodified 1571.7652 0.76519604 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437 EZR;HEL-S-105 Ezrin yes no 0 0 2 2 0 1 34.292 34.349 4 0.0018196 7417 20230619_1881_Aki_TMTPro18x_K_F2 84.946 46.757 67576 59897 59972 60756 81726 63728 65022 69157 69067 78225 69235 64898 77948 59027 50086 96997 103480 81995 62460 54840 61842 61378 82528 64451 66681 70491 70254 78134 71343 66356 77974 63116 54617 95866 98340 78117 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29280000 22347 3456 20940 42072 33844 33844 1 9606 Homo sapiens 0.0021840524202616507 RAQSFAER Unmodified 963.48863 0.48862725 16 E7EPA1;B2R7R5;A0A024QYY3;O60256-3;O60256;C9K0K7;O60256-4;O60256-2;I3L0S1 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes no 0 0 1 5.33 0.471 2 1 27.267 27.301 3 0.00045419 4852 20230619_1886_Aki_TMTPro18x_K_F6 141.02 76.754 49143 32499 49842 53425 69834 69754 61133 61077 70955 24444 32275 24773 22383 23285 43561 19326 35291 20969 45392 29943 50888 52408 70670 69073 62415 62018 70029 26769 34495 25133 24208 23842 43326 19662 33747 19952 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37339000 22348 16 20941 42073;42074;42075 33845;33846;33847 33847 3 9606 Homo sapiens 0.005422483264283073 RAQTSGIEEETVK Unmodified 1446.7314 0.7314363 3023 H0Y5P4;Q59EQ6;Q5JT35;Q5HYC6;P55197-1;P55197 MLLT10;DKFZp779J0967 Protein AF-10 yes no 0 0 1 3 0 1 37.094 37.147 3 0.00071242 8428 20230619_1882_Aki_TMTPro18x_K_F3 89.46 32.504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22349 3023 20942 42076 33848 33848 1 9606 Homo sapiens 0.025939837502846785 RAQTVAIR Unmodified 913.54575 0.5457482 1315 A0A1W2PPD9;V9H1L1;Q9H224 yes no 0 0 1 3 0.816 1 1 1 23.213 23.322 3 0.00070991 3881 20230619_1882_Aki_TMTPro18x_K_F3 117.89 79.652 35594 27624 32832 33902 39421 38681 39508 41397 45888 21572 21510 18458 17632 14818 24312 18052 25595 16970 32881 25348 33682 33793 40402 38821 40014 41565 45338 22804 23042 18778 18451 15579 24636 18051 24417 16161 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11784000 22350 1315 20943 42077;42078;42079 33849;33850 33850 2 9606 Homo sapiens 0.08551715602789045 RARPAEVGGMQLR Unmodified 1439.7779 0.77794976 3541 P33316-2;H0YNW5;P33316;H0YKC5;H0YNJ9;H0YMM5;H0YKI0 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes no 0 0 2 4 0 1 32.255 32.315 4 5.8176E-06 6457 20230619_1883_Aki_TMTPro18x_K_F4 132.86 70.45 43978 40388 62089 43569 76981 56934 57058 67024 48528 38793 59651 58393 42524 47096 59449 29630 60885 47049 40835 36993 61634 43989 77945 56870 58498 66978 50322 41289 59960 58000 44816 47989 60060 31143 58145 44553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16990000 22351 3541 20944 42080 33851 33851 1 9606 Homo sapiens 0.07565189891238333 RASAYEALEK Unmodified 1136.5826 0.58258722 3941 Q15785;B4DXU3 TOMM34 Mitochondrial import receptor subunit TOM34 yes no 0 0 1 6.5 0.5 1 1 40.365 40.445 3 0.0004944 9706 20230619_1886_Aki_TMTPro18x_K_F6 106.11 55.02 113410 83998 116630 120390 155020 158960 140750 155220 148910 140840 175960 159720 178330 146640 158270 170550 181150 156340 104830 77221 118800 119070 157480 157700 143050 158370 152290 143680 179250 160990 180940 152950 162610 170200 172930 148740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106000000 22352 3941 20945 42081;42082 33852 33852 1 9606 Homo sapiens 0.019759226380301698 RASDNLVK Unmodified 901.49813 0.49812931 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 1 8 0 1 34.455 34.446 3 0.011286 7331 20230619_1888_Aki_TMTPro18x_K_F8 76.1 33.991 51389 28232 66811 61338 86708 88984 68791 77499 79435 56521 82486 96451 71465 75813 77363 41821 93837 94491 47539 26147 66839 59531 87926 87562 70774 79382 80349 59493 84115 95298 73681 77070 79268 45648 89628 89187 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112120000 22353 1292 20946 42083 33853 33853 1 9606 Homo sapiens 0.043440166119466994 RASDNLVR Unmodified 929.50428 0.50427732 4740 Q9Y4G6;A0A1B0GVU7;G1UI21;H0YMT1;B4DGF3 TLN2 Talin-2 yes no 0 0 1 5.5 0.5 1 1 27.837 27.889 3 0.0026643 5066 20230619_1886_Aki_TMTPro18x_K_F6 98.033 37.06 17145 11017 15898 21084 27801 30636 26703 31325 37637 25323 37223 36015 26122 27842 25185 16624 44220 38532 15823 10174 16470 20566 27926 30245 27317 31771 37637 26255 37705 35778 27027 28399 26624 18141 42086 36387 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12589000 22354 4740 20947 42084;42085 33854 33854 1 9606 Homo sapiens 0.03670534843467976 RASEDTTSGSPPK Unmodified 1331.6317 0.63172225 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;Q9BZZ5-5;Q9BZZ5-6;B4DDR3;H0YER7 API5 Apoptosis inhibitor 5 yes no 0 0 1 4 0 2 29.994 30.061 3 0.053448 5609 20230619_1883_Aki_TMTPro18x_K_F4 45.28 20.988 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22355 4478 20948 42086;42087 33855;33856 33856 2 9606 Homo sapiens -0.02082833863664746 RASGPGDPAPAGHLDPR Unmodified 1669.8285 0.828465 4300 Q92618 ZNF516 Zinc finger protein 516 yes yes 0 0 1 5 0 1 31.192 31.27 4 5.18E-06 6168 20230619_1885_Aki_TMTPro18x_K_F5 100.04 64.818 8404.6 5803.4 9413.4 6872.4 12992 11967 11199 13038 10503 10230 11931 10314 11872 9865 11722 9222.8 12009 10256 7771.6 5326.1 9514.7 6928.1 13138 11743 11381 13155 10799 10488 12164 10457 12108 10160 11923 9346.5 11475 9736.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9159600 22356 4300 20949 42088 33857 33857 1 9606 Homo sapiens 0.020343907499182023 RASGQAFELILKPPSPISEAPR Unmodified 2363.2961 0.29612903 2878 E5RGX5;Q93045;Q93045-2;B7Z4K3;B7Z5W7 STMN2 Stathmin;Stathmin-2 yes no 0 0 2 4 0 2 55.836 55.844 3;4 1.0673E-12 16548 20230619_1883_Aki_TMTPro18x_K_F4 142.79 107.15 263360 217120 258230 256930 116550 123170 171060 157840 158720 259700 282300 252570 254600 248720 220590 267000 251890 241970 243500 199110 260510 254590 133650 135660 169310 161860 167590 256580 282370 256630 259270 257480 226890 266530 240640 230120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2512500000 22357 2878 20950 42089;42090 33858;33859 33858 2 9606 Homo sapiens 0.16901280714864697 RASGQAFELILSPR Unmodified 1543.8471 0.84707518 2660 B5BU83;P16949;A2A2D0;Q96CE4;A0A140VJW2;P16949-2;Q59G27 STMN1 Stathmin yes no 0 0 1 4 0.816 1 1 1 51.605 51.662 3 1.2095E-11 14851 20230619_1882_Aki_TMTPro18x_K_F3 176.33 105.37 546250 455750 495120 489550 456530 524120 520740 510430 539050 426780 442440 387620 392080 327560 430740 472460 485280 367120 504770 417560 506600 492360 479210 527180 521990 520230 543890 434750 456070 393690 403690 347420 440530 466470 462970 350240 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 10586000000 22358 2660 20951 42091;42092;42093 33860;33861;33862 33860 3 9606 Homo sapiens 0.09690552391793972 RASLQASTAAPEAR Unmodified 1427.7481 0.74808942 1570 Q01433;A0A5F9UK94;H0Y360;A0A804CCZ3;A0A7P0Z4H6;A0A590UJX5;A0A7P0T999 AMPD2 AMP deaminase 2 yes no 0 0 1 7.5 0.5 1 1 31.965 32.014 3 1.2664E-09 6123 20230619_1887_Aki_TMTPro18x_K_F7 142.91 104.96 22079 12768 18525 20854 21951 22745 22049 24499 29069 24989 30370 22563 26761 23100 21103 29026 35888 23333 20352 11771 19177 20410 22542 22888 22448 24909 29246 25165 30875 23077 27176 24116 22413 28733 34108 22269 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21868000 22359 1570 20952 42094;42095 33863;33864 33863 2 9606 Homo sapiens 0.05132529426873589 RASMQPIQIAEGTGITTR Oxidation (M) 1945.0051 0.005108738 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 1 1 1 0 1 42.716 42.716 3 0.00093409 11282 20230619_1880_Aki_TMTPro18x_K_F1 70.897 53.409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22360 349;3906 20953 42096 33865 33865 206 1 9606 Homo sapiens 0.07040638798025611 RASPNSDDTVLSPQELQK Unmodified 1983.9861 0.98614743 719 A0A024RCF9;A8K5B0;Q9UH62 ARMCX3 Armadillo repeat-containing X-linked protein 3 yes no 0 0 1 4 0 1 45.707 45.751 3 0.00044197 12044 20230619_1883_Aki_TMTPro18x_K_F4 78.441 67.001 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22361 719 20954 42097 33866 33866 1 9606 Homo sapiens 0.03351380707977114 RASPSKPASAPASR Unmodified 1381.7426 0.74261011 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;A0A024R2V0;P27816-4;Q86Y04;P27816-5;B5MEG9;H7C4C5;H0Y2V1;F8W9U4 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 2 5.5 0.5 1 1 27.973 28.025 4 9.3496E-05 4989 20230619_1885_Aki_TMTPro18x_K_F5 98.421 91.841 29532 15406 35943 33199 53481 50972 41290 44600 31441 22047 38596 32627 21891 19130 46903 8720.3 21606 12207 27295 14271 36215 32268 53724 50025 42059 45383 32823 23805 38544 32188 24026 19618 45642 9262.5 20852 11592 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28299000 22362 2902 20955 42098;42099 33867;33868 33867 2 9606 Homo sapiens 0.0670085063507031 RASVCAEAYNPDEEEDDAESR Unmodified 2411.9772 0.97717525 424 B3KY43;Q6DHZ2;A0A024R712;P31323;Q75MP1 PRKAR2B cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 1 1 0 1 38.747 38.747 3 2.7244E-23 9538 20230619_1880_Aki_TMTPro18x_K_F1 190.91 183.07 23609 18571 23608 26858 19253 25136 24223 26070 23184 30063 31280 33895 32191 26095 30903 36658 32930 43177 21825 17071 23940 26411 20499 25553 24126 26678 24026 30261 31775 33972 32753 27749 31595 37009 31558 40903 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97393000 22363 424 20956 42100 33869 33869 1 9606 Homo sapiens -0.17233425501308375 RASVFVK Unmodified 805.48102 0.48102268 1242 B4E0U6;A0A140VKA6;P50502;Q0IJ56;Q1XBU6;B7ZA40;H7C3I1;Q3KNR6;Q8IZP2;Q8NFI4;F6VDH7;D6W507 ST13;ST13P4;ST13P5;hCG_1990625 Hsc70-interacting protein;Putative protein FAM10A4;Putative protein FAM10A5 yes no 0 0 1 5 0.816 1 1 1 39.007 39.079 3 0.012294 9156 20230619_1886_Aki_TMTPro18x_K_F6 91.853 53.615 1011000 786430 864280 899650 1112100 1261000 1045800 1051900 1321300 623060 672220 615020 616170 512810 812120 721940 778960 539720 933470 721140 894140 904020 1134800 1242800 1066300 1077500 1302400 653890 717850 622150 640270 543150 819950 712310 743970 515430 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1200800000 22364 1242 20957 42101;42102;42103 33870;33871;33872 33872 3 9606 Homo sapiens 0.07050140796809501 RATAAECLR Unmodified 1046.5291 0.52911186 2119 A8K8B2;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3;A0A024RCU9 SRPK1 SRSF protein kinase 1 yes no 0 0 1 6 0 1 28.813 28.844 3 0.0034455 5374 20230619_1886_Aki_TMTPro18x_K_F6 76.143 46.399 57654 42261 47838 48280 54355 66093 46884 58995 75777 25654 27288 25659 26296 23100 30854 24502 32233 25326 53202 38761 49509 48508 55881 65298 48601 59826 73470 27814 30228 25995 27119 23986 31331 24671 30779 24071 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11459000 22365 2119 20958 42104 33873 33873 1 9606 Homo sapiens 0.007708466545409465 RATDVMIAGK Unmodified 1060.5699 0.56991404 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 1 1.5 0.5 1 1 41.399 41.437 3 0.00055325 10740 20230619_1880_Aki_TMTPro18x_K_F1 103.34 86.016 338710 214580 263050 325310 300240 336080 290050 330020 429340 388470 452400 497100 469690 442770 338960 563650 639560 549730 312180 197540 274400 319370 309170 338750 297460 339110 430280 392900 463880 498030 473280 464590 364760 563000 608390 522610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 315710000 22366 1439 20959 42105;42106 33874;33875 33874 2 9606 Homo sapiens 0.042051879741620724 RATIQFHQPQR Unmodified 1380.7375 0.73746515 1610 A0A6M8YHF9;A0A6M8YDW2;A0A6M8YDW1;Q8IUF8-4;Q8IUF8;Q8IUF8-2 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA yes no 0 0 1 5.5 0.957 1 2 2 1 31.501 31.565 3;4 0.00011202 6160 20230619_1883_Aki_TMTPro18x_K_F4 96.756 74.71 60448 62799 66171 70024 71915 78705 80349 76906 98641 77282 81005 74030 81026 64042 78910 82603 97981 76354 56033 57515 66861 70259 74468 78907 81065 78706 98683 78029 83900 75005 82595 67390 81340 82355 93413 72667 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 183040000 22367 1610 20960 42107;42108;42109;42110;42111;42112 33876;33877;33878 33876 3 9606 Homo sapiens 0.0623259156311633 RATLEEHLR Unmodified 1123.6098 0.60980502 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B4DL23;B4DS35;H0YB92 CEP170 Centrosomal protein of 170 kDa yes no 0 0 1 6.5 0.5 1 1 31.582 31.648 3 0.00040442 6383 20230619_1886_Aki_TMTPro18x_K_F6 117.7 71.236 36411 29104 33386 35560 41947 39791 39430 37997 47089 43830 46099 49086 50063 41104 40880 47887 60625 49919 33640 26702 34300 35439 42791 39896 40135 39103 47506 44150 47528 49311 50545 43028 42852 48109 57740 47431 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34648000 22368 1960 20961 42113;42114 33879 33879 1 9606 Homo sapiens 0.05294450969063291 RATTGTQTLLSSGTR Unmodified 1548.822 0.82198264 458 A8K5G0;A0A024R7K0;M0R2Z9;Q8IX01-4;Q8IX01-3;Q8IX01;M0R3F6;B4DSQ4 SFRS14;SUGP2 SURP and G-patch domain-containing protein 2 yes no 0 0 1 5 0 1 35.086 35.176 3 7.0646E-08 7617 20230619_1885_Aki_TMTPro18x_K_F5 136.34 118.91 24596 19839 25187 28275 32758 33877 29896 30930 42495 19770 22375 13765 19894 15405 25463 18698 23479 17356 22746 18231 25667 27921 33353 33757 30682 31498 41701 20448 23745 14348 20646 16023 25644 18685 22441 16522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30822000 22369 458 20962 42115 33880 33880 1 9606 Homo sapiens 0.06952452798554987 RATVECVK Unmodified 961.5015 0.50150012 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;E9PLT0;E9PNG3;Q9UG93;Q8WU01;Q9UG12 CSDE1;UNR;DKFZp586J0620;DKFZp566C233 Cold shock domain-containing protein E1 yes no 0 0 1 7.5 0.5 1 1 34.257 34.333 3 0.0033057 7045 20230619_1887_Aki_TMTPro18x_K_F7 99.802 80.189 23764 15273 38410 29028 35971 43082 34798 39001 38966 21481 33926 31709 30692 24565 34857 17949 34970 25820 22057 14103 37709 28364 37514 42362 35314 39639 39181 22984 34901 31492 31613 25236 35277 18646 33394 24474 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7048500 22370 88 20963 42116;42117 33881;33882 33881 2 9606 Homo sapiens 0.019209433943160548 RATVLESEGTR Unmodified 1217.6364 0.6364137 4673 Q9UJZ1;A0A087WYB4;Q9UJZ1-2;Q6ZNW0;F2Z2I8 STOML2 Stomatin-like protein 2, mitochondrial yes no 0 0 1 4.5 1.12 1 1 1 1 31.608 31.671 3 1.7779E-06 6155 20230619_1883_Aki_TMTPro18x_K_F4 140.01 115.16 186130 141520 150780 194150 224760 220180 210640 213830 261380 198820 233440 251040 255240 209090 201490 254590 269180 240270 171760 130020 157460 191980 227170 220550 214680 218500 262120 203440 241840 251120 257280 219430 209850 254170 256700 228470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 465300000 22371 4673 20964 42118;42119;42120;42121 33883;33884;33885 33884 3 9606 Homo sapiens 0.03630095069752315 RATVVESSEK Unmodified 1104.5775 0.57750184 3701 P61981;B3KNB4;B4DE78;B4DHC4 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes no 0 0 1 5 0.707 1 2 1 32.92 32.984 2;3 1.9261E-05 6684 20230619_1883_Aki_TMTPro18x_K_F4 145.14 102.79 99396 39895 116700 119880 169500 159100 118750 162330 137810 98188 163140 207910 146640 154070 151620 65733 193160 186260 91748 37273 117860 114860 170280 157860 123430 163800 140150 105990 165790 203970 150640 156000 155880 74535 184360 175660 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1100800000 22372 3701 20965 42122;42123;42124;42125 33886;33887;33888 33886 3 9606 Homo sapiens 0.02939618775440067 RAVASQPDSVDAAER Unmodified 1570.7699 0.76994707 2917 E9PHT6;Q9NVE7;B4DZX1;B4DHW9;H0YA26 PANK4 Pantothenate kinase 4 yes no 0 0 1 2.5 0.5 1 1 31.555 31.626 3 4.3298E-14 6334 20230619_1881_Aki_TMTPro18x_K_F2 174.18 144.84 22403 13769 16301 19660 18788 18872 18489 19713 28252 23012 33221 36232 34461 33262 20536 35250 41541 45506 20637 12669 17119 19353 19332 19164 18966 20177 28394 23497 33898 36090 34517 34502 22369 35917 39570 43098 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32606000 22373 2917 20966 42126;42127 33889;33890 33889 2 9606 Homo sapiens 0.007392893847963933 RAVDGFTFTEGDK Unmodified 1441.6838 0.68375782 2815 D3DSC5;H9KV31;O15394-2;O15394;B7Z5K2 NCAM2 Neural cell adhesion molecule 2 yes no 0 0 1 5 0 1 48.039 48.115 3 0.00012849 12968 20230619_1885_Aki_TMTPro18x_K_F5 99.069 64.683 64895 56246 70045 62347 57316 65410 70935 66667 87631 65639 73210 74053 73650 63924 73763 70700 84712 89194 60068 51541 70491 62552 60930 65953 71253 68014 87665 66691 75827 74456 75188 66655 75591 71981 80977 84505 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32660000 22374 2815 20967 42128 33891 33891 1 9606 Homo sapiens -0.01941670449900812 RAVDLIQK Unmodified 941.56581 0.56581494 3568 Q6FHX6;P39748;B4DWZ4;P39748-2;I3L3E9 FEN1 Flap endonuclease 1 yes no 0 0 1 1.5 0.5 1 1 42.8 42.84 3 0.0031213 11117 20230619_1881_Aki_TMTPro18x_K_F2 101.46 40.487 1318500 987470 1157500 1091200 1205900 1369100 1368100 1270300 1604100 1189400 1350200 1209100 1291700 1048000 1221300 1384600 1452000 1089300 1217300 905350 1189700 1097700 1254100 1361300 1376900 1302500 1609100 1207900 1393800 1222200 1316800 1103900 1256700 1369200 1384600 1039100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 977170000 22375 3568 20968 42129;42130 33892 33892 1 9606 Homo sapiens 0.09269466542764349 RAVETTAQSDNK Unmodified 1318.6477 0.64770667 3566 P38606-2;P38606;B7Z2V6;A0A994J477 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 1 4 0 1 30.865 30.929 3 0.001951 5921 20230619_1883_Aki_TMTPro18x_K_F4 89.663 56.434 4433.8 3418.4 7141.3 8747.8 8925.3 13593 8124.7 11031 14277 7950.8 14083 26401 12490 16674 14398 8124.3 26574 36316 4119.1 3170.8 7071 8443.4 9143.1 13294 8433.6 11364 14156 8768.2 14474 25576 12947 17072 15245 9892.1 25376 34158 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17048000 22376 3566 20969 42131 33893 33893 1 9606 Homo sapiens 0.0011287237325632304 RAVLETIR Unmodified 956.57671 0.57671398 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9;B3KY97 RRP12 RRP12-like protein yes no 0 0 1 2 0 1 37.379 37.44 3 0.010708 8665 20230619_1881_Aki_TMTPro18x_K_F2 77.677 35.079 110720 91804 95749 98691 166400 194730 146230 146620 199770 42442 52613 59021 53948 44002 52027 32473 57299 46602 102270 84115 99626 100350 166930 188460 150070 150260 194110 49320 61010 58686 54993 45291 53112 33685 54698 44152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75527000 22377 2355 20970 42132 33894 33894 1 9606 Homo sapiens 0.0966886891702643 RAVLSCIAPSAK Unmodified 1271.702 0.70199085 4409 Q9BPX3;Q6NUR1;D6RA93 NCAPG Condensin complex subunit 3 yes no 0 0 1 5 0 1 44.189 44.268 3 0.031699 11321 20230619_1885_Aki_TMTPro18x_K_F5 54.309 35.869 74757 59102 66547 65579 72117 83330 79353 64591 101680 54771 51596 44002 54770 36498 56645 58393 61781 44093 69048 54177 68370 65941 74746 82494 80203 67059 100180 55673 55394 44960 55854 39088 57853 57524 58939 42096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43326000 22378 4409 20971 42133 33895 33895 1 9606 Homo sapiens 0.07700792991090566 RAWNTEDDLPVYLAR Unmodified 1817.906 0.90604662 3880 X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 yes no 0 0 1 6 0 1 53.409 53.486 3 1.3962E-05 15420 20230619_1886_Aki_TMTPro18x_K_F6 111.64 98.876 84957 76523 88856 84435 66873 72584 77115 82324 80647 101080 104990 103090 104510 92187 104740 109700 103690 113950 78636 70109 89566 84531 71449 74564 77367 83937 83010 101150 106560 104200 106690 96375 106470 110180 99289 108150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61440000 22379 3880 20972 42134 33896 33896 1 9606 Homo sapiens 0.029809838954406587 RAYICAHPLDR Unmodified 1370.6877 0.68773776 4531 Q9H845;Q9H9W4;H0Y8Z9;Q9BUX5 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 1 2 0 1 34.488 34.545 4 0.00083418 7498 20230619_1881_Aki_TMTPro18x_K_F2 80.979 54.353 56098 47837 50930 51081 59338 63326 63219 64365 66346 44274 52030 47436 45522 39691 47445 52129 62205 45788 51847 43823 52296 51512 61061 63146 63606 65133 66758 45945 53753 47807 46793 41837 49045 51820 59261 43617 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45704000 22380 4531 20973 42135 33897 33897 1 9606 Homo sapiens 0.017221405627878994 RCCHCCLLGR Unmodified 1390.5839 0.58388309 2766 CON__ENSEMBL:ENSBTAP00000016046;P23142;B4DUV1;A0A8S0MAG0;A0A8S0LWY1;B1AHL2;P23142-2;P23142-3;P23142-4;B1AHM7;B1AHN3;B1AHM8;H7C1M6;B1AHM9 FBLN1 Fibulin-1 yes no 0 0 1 4.5 0.5 1 1 28.518 28.59 4 0.00020022 5240 20230619_1885_Aki_TMTPro18x_K_F5 121.73 106.7 + 17081 15645 19143 16908 22083 24816 22114 21278 29124 23460 28425 27557 19099 20787 25072 21534 27664 26454 15822 14331 19307 17085 22715 24416 22509 22036 29213 23729 28788 27553 20108 21688 25514 21917 26435 25079 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 14874000 22381 2766 20974 42136;42137 33898;33899 33899 2 9606 Homo sapiens -0.09578549132356784 RCCQDGLTR Unmodified 1164.5128 0.51280987 2765 CON__ENSEMBL:ENSBTAP00000007350;CON__P01030 yes no 0 0 1 6 0 1 25.899 25.936 3 0.01799 4395 20230619_1886_Aki_TMTPro18x_K_F6 60.434 51.43 + 3928.3 6531.1 8117.8 4943.5 9432.4 9879.7 7387.6 7901.6 10420 8437.9 15259 18370 7153.5 7695.8 16019 3646.8 13569 6889.2 3687.9 5957.4 7897.5 5199.8 9628.5 9578.3 7669.4 8221.1 10612 8796.2 15105 17804 7984.9 8061.8 15927 3956.7 12960 6533.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6985800 22382 2765 20975 42138 33900 33900 1 9606 Homo sapiens -0.06286602573891287 RCDADAPEDQCTVTR Unmodified 1792.7468 0.74684514 1517 A0A494C126;A0A3B3IT31;Q9NUN5-3;Q9NUN5 LMBRD1 Probable lysosomal cobalamin transporter yes no 0 0 1 1 0 1 30.69 30.69 3 1.2607E-07 6284 20230619_1880_Aki_TMTPro18x_K_F1 129.01 117.74 4855.3 2906.2 4420.4 5306.9 4251.9 4069.9 5286.3 4704.2 4532.7 5106.8 4432.2 3547.5 4465 4405 2667.5 4097.5 4799.5 5149.5 4478.7 2682.9 4529 5142 4450.4 4222.4 5246.4 4776 4660.5 5091.3 4545.7 3702.2 4476.6 4500.6 2869.7 4177.1 4574 4878.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5345200 22383 1517 20976 42139 33901 33901 1 9606 Homo sapiens -0.11781840786511566 RCDIIIISGR Unmodified 1201.6601 0.66012603 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;Q6ZS03;B4DKR8;Q96CF6;Q2HJC8;Q6ZN49 HDLBP Vigilin yes no 0 0 1 2 0.816 1 1 1 42.979 43.028 3 0.00013634 11227 20230619_1881_Aki_TMTPro18x_K_F2 126.76 92.01 152100 127170 149990 158420 158610 162470 173600 184260 245140 139320 107990 105250 149080 119390 151570 174270 130230 149160 140650 116670 152720 157510 164490 164510 176300 185490 239990 142390 119070 109030 150970 125630 153040 172760 124940 141870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204860000 22384 292 20977 42140;42141;42142 33902 33902 1 9606 Homo sapiens 0.06736237302584414 RCEFVMEVTNK Unmodified 1411.6588 0.6588054 1248 Q16851-2;A0A140VKE1;A0A7I2YQ74;Q16851;E7EUC7;B4DUP2;A0A087WYS1;B2RAN1;Q53QE9;D6W5E6;A0A7I2V676 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes no 0 0 1 7.5 0.5 1 1 47.289 47.362 3 0.00012882 12357 20230619_1887_Aki_TMTPro18x_K_F7 118.87 85.457 199420 138090 169890 194610 160270 164010 179660 193810 188320 230450 244620 239470 264970 227370 201760 274790 310790 287410 184000 126960 175010 191460 167710 168850 180430 196920 193790 231100 249120 242380 266890 237470 212680 275860 296140 272940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176200000 22385 1248 20978 42143;42144 33903 33903 1 9606 Homo sapiens -0.03055764848477338 RCELCDDGYFGDPLGR Unmodified 1928.8145 0.81453078 558 A0A024R972;P11047 LAMC1 Laminin subunit gamma-1 yes no 0 0 1 3.5 0.5 1 1 51.316 51.366 3 0.024982 14775 20230619_1882_Aki_TMTPro18x_K_F3 52.52 46.805 103440 78200 90585 99748 96114 108060 110340 118690 130170 120940 106610 103790 136090 99937 111290 146680 132820 139650 95507 71793 93237 99082 99846 108870 111040 120530 130600 121590 111750 106100 136710 105780 114990 146130 126920 132690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82958000 22386 558 20979 42145;42146 33904 33904 1 9606 Homo sapiens -0.11272390855697267 RCEPIAMTVPR Oxidation (M) 1344.6642 0.66422513 373 A0A024R611;P31146;Q59G88;H3BRY3 CORO1A Coronin;Coronin-1A yes no 0 1 1 7.5 0.5 1 1 33.593 33.631 3 0.02737 6971 20230619_1888_Aki_TMTPro18x_K_F8 85.672 62.296 45325 39668 45378 38551 53433 55919 47920 51783 59289 50458 60779 53661 53363 46159 51120 47380 59499 46290 41930 36308 46165 39295 54709 55161 49009 53118 59781 51180 61911 54094 54600 47918 52458 47557 56756 44026 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34836000 22387 373 20980 42147;42148 33905;33906 33906 228 2 9606 Homo sapiens 0.005679587339727732 RCETNVAPNCGVDAR Unmodified 1717.7624 0.76243563 2273 L7RTI5;B2R9M7;Q02156;E9PBI2 PRKCE Protein kinase C epsilon type yes no 0 0 1 4 0 1 31.207 31.271 3 0.00040084 6043 20230619_1883_Aki_TMTPro18x_K_F4 81.448 75.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22388 2273 20981 42149 33907 33907 1 9606 Homo sapiens -0.06773509478784945 RCFIEEIPDETMVIGNYR Oxidation (M) 2257.0507 0.050738302 4178 Q7Z7H5-3;Q7Z7H5-2;Q7Z7H5;F8W7F7 TMED4 Transmembrane emp24 domain-containing protein 4 yes no 0 1 1 5 0 1 57.002 57.064 3 0.0024147 16714 20230619_1885_Aki_TMTPro18x_K_F5 84.94 67.222 27558 23379 30436 30636 31434 26494 33826 29307 32441 28848 33175 31809 33198 28436 34781 29219 31683 38027 25510 21460 30686 30294 32550 27192 33923 29760 33145 29272 34008 32047 33951 29499 35140 29861 30388 36002 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133000000 22389 4178 20982 42150 33908 33908 2691 1 9606 Homo sapiens -0.027505038018716732 RCFIEEIPDETMVIGNYR Unmodified 2241.0558 0.05582368 4178 Q7Z7H5-3;Q7Z7H5-2;Q7Z7H5;F8W7F7 TMED4 Transmembrane emp24 domain-containing protein 4 yes no 0 0 1 6 0 1 60.217 60.274 3 2.0136E-31 18221 20230619_1886_Aki_TMTPro18x_K_F6 241.79 233.29 40606 38684 48698 49101 37272 41307 45217 49365 51792 50655 49954 50484 58571 47949 49615 56017 56336 62917 37647 35483 48624 48644 39815 42548 45372 49910 52330 51112 51717 51181 59071 49997 51017 56528 53882 59662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280350000 22390 4178 20982 42151 33909 33909 1 9606 Homo sapiens -0.015061999392401049 RCFTANQNNVGDTSR Unmodified 1738.7805 0.78052853 515 A0A024R8E8;Q7Z333-3;Q7Z333;Q7Z333-4 SETX Probable helicase senataxin yes no 0 0 1 8 0 1 31.937 31.942 3 1.4214E-07 6294 20230619_1888_Aki_TMTPro18x_K_F8 126.88 101.01 6836.8 3728.6 3528 4668.9 5026.9 5986.6 3873.6 3372.3 4492.6 4580.3 7357.4 4503.8 5699 3618.1 3983.1 5996.3 4354.4 3588.9 6283.3 3427.9 3887.3 4650.8 5086.1 5893.1 3993.1 3660.9 4651.6 4564.6 7317.4 4560.3 5776.5 3888.6 4112.5 5847.2 4157.4 3437.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7657100 22391 515 20983 42152 33910 33910 1 9606 Homo sapiens -0.059310512324600495 RCGVQSFYTPR Unmodified 1369.6561 0.65610329 4179 Q7Z7K6;Q7Z7K6-3;Q7Z7K6-2 CENPV Centromere protein V yes no 0 0 1 5.5 0.5 1 1 38.023 38.107 3 0.00022355 8724 20230619_1885_Aki_TMTPro18x_K_F5 105.65 85.556 50732 36735 44238 48763 48088 49371 44093 44513 54246 34790 36453 27100 36251 28897 36780 38427 41293 29791 46827 33745 45551 48253 49543 49771 45008 45563 53928 35494 38172 27982 37032 30256 37644 37978 39386 28429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128770000 22392 4179 20984 42153;42154 33911 33911 1 9606 Homo sapiens -0.013938521911541102 RCILPFDK Unmodified 1047.5535 0.55353569 816 A0A087WUN7;H0YJ40;G3V4X6;G3V2S9;Q9GZT3-2;Q9GZT3;H0YJW7 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes no 0 0 1 4 0 1 48.6 48.638 3 0.059599 13343 20230619_1883_Aki_TMTPro18x_K_F4 48.157 27.975 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22393 816 20985 42155 33912 33912 1 9606 Homo sapiens 0.03166106808043878 RCIPASLDAYYSSQDPNSR Unmodified 2199.0015 0.0014799231 2534 E5RHS6;B4DLX1;E5RGE8;Q7Z4X6;Q6IAL2;Q9Y328 HMP19;NSG2 Neuron-specific protein family member 2 yes no 0 0 1 8 0 1 47.312 47.36 3 1.9626E-14 12421 20230619_1888_Aki_TMTPro18x_K_F8 150.23 145.79 18052 20723 18979 16389 6436.8 7567.9 13705 14506 17355 27272 19674 27578 24947 21048 21294 26659 30793 34456 16741 18924 18996 16833 7879.7 8510 13532 14686 17618 26858 20359 27714 25130 22240 22271 27115 29396 32630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44158000 22394 2534 20986 42156 33913 33913 1 9606 Homo sapiens -0.05006075766414142 RCLYASVLTAQPR Unmodified 1533.8086 0.80858118 3447 P13639;Q8TA90;B4DPU3 EEF2 Elongation factor 2 yes no 0 0 1 7 0.816 1 1 1 45.456 45.522 3 5.0751E-11 11485 20230619_1887_Aki_TMTPro18x_K_F7 163.99 147.46 276700 267280 281120 254220 264130 294610 295070 301780 328320 171280 166810 139210 171480 134800 209000 161150 184870 141820 256180 244510 284790 258640 276550 295140 296740 304270 325670 179380 178900 142840 176640 140640 210240 160610 176820 135060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 737250000 22395 3447 20987 42157;42158;42159 33914;33915 33914 2 9606 Homo sapiens 0.06302923485623069 RCPTCHNIIDNCK Unmodified 1686.7389 0.73886341 613 A0A090N7U2;A0A024RA81;X6RM59;Q9H0P0-3;Q9H0P0-2;Q9H0P0-1;Q9H0P0;B9A035 NT5C3;NT5C3A 5'-nucleotidase;Cytosolic 5'-nucleotidase 3A yes no 0 0 1 8 0 1 34.122 34.118 4 0.0025723 7152 20230619_1888_Aki_TMTPro18x_K_F8 73.927 52.974 8681 8369.8 9312.7 10452 11077 9490.8 11206 12456 14287 11032 8158.3 13125 10859 10052 9194.5 13837 13575 15984 8040.9 7675.6 9438.4 10375 11350 9745.1 11385 12480 14138 11290 8811 13112 10934 10668 9647 13948 12963 15150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8491400 22396 613 20988 42160 33916 33916 1 9606 Homo sapiens -0.07703646516938534 RCQLPDGSFR Unmodified 1234.5877 0.58768937 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9;O75643-2 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 1 7.5 0.5 1 1 36.6 36.628 3 1.155E-07 8116 20230619_1888_Aki_TMTPro18x_K_F8 163.9 127.21 205750 172930 192900 204560 212670 218240 238500 232930 257230 217430 212210 213720 241800 198540 197690 245570 258420 244900 190180 158580 197390 204220 219910 220050 239510 236540 259150 220510 221140 216700 243790 207840 205410 245840 246570 232660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274530000 22397 3312 20989 42161;42162 33917 33917 1 9606 Homo sapiens -0.020220967709974502 RCQLTPNDR Unmodified 1158.5564 0.55638924 4493 Q9H0C8;F8SNU7;H7C2I8 ILKAP;ILKAP3 Integrin-linked kinase-associated serine/threonine phosphatase 2C yes no 0 0 1 6 0 1 27.823 27.855 3 0.087976 5018 20230619_1886_Aki_TMTPro18x_K_F6 45.161 23.654 5502.6 5262.2 4861 7402.2 6852.5 6202.3 6801.3 7126.2 8103.4 7111.9 8072.9 8080.4 6281.4 5281.5 7020.6 6642.3 9966.9 7335.8 5088.5 4832.1 5035.5 7279 6950.7 6386.1 6899.5 7218.2 8175.6 7215.7 8206.8 8062.4 6506.4 5612.7 7285.2 6693.3 9489.5 6969.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4888500 22398 4493 20990 42163 33918 33918 1 9606 Homo sapiens -0.016546698051115527 RCQYVTEK Unmodified 1082.5179 0.51787847 3378;26 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;A0A0M4FNU3;A4UCS9;A4UCT0;A0A024QZ64;P09972;B7Z1Y2;B7Z3K9;B7Z1N6;B7Z3K7;B7Z1Z9;B7Z1L5 ALDOA;HEL-S-87p;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C no no 0 0 1 7 0.816 1 1 1 33.629 33.669 3 0.00019987 6941 20230619_1888_Aki_TMTPro18x_K_F8 146.69 95.784 273000 58173 157730 315410 267900 1194500 255610 323050 1076000 367100 465740 1195200 973380 1056600 280900 546380 1630800 1929100 250390 55761 173570 306950 278640 1117900 282920 391170 1023300 396650 532400 1167900 947940 1068200 373600 633490 1549300 1816500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1314100000 22399 3378;26 20991 42164;42165;42166 33919;33920 33920 2 9606 Homo sapiens -0.02007975439596521 RCTALTFIASEEK Unmodified 1524.7606 0.76062794 3670 P57081;P57081-2 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 yes no 0 0 1 8 0 1 50.147 50.224 3 5.8981E-05 13630 20230619_1888_Aki_TMTPro18x_K_F8 111.83 74.687 55832 48760 52709 54834 50991 52615 57956 54639 68515 52180 54292 47473 56774 45874 62052 57073 55983 50220 51624 44685 53785 54872 53276 53446 58351 55633 68585 52759 56457 48398 58099 47972 62640 56812 53582 47793 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33752000 22400 3670 20992 42167 33921 33921 1 9606 Homo sapiens 0.019238047749013276 RCVDQLTK Unmodified 1018.523 0.52296385 341 C9JM66;A0A024R5H2;E9PG19;O94868-3;O94868-2;O94868 FCHSD2 F-BAR and double SH3 domains protein 2 yes no 0 0 1 8 0 1 37.003 36.989 3 0.0023774 8261 20230619_1888_Aki_TMTPro18x_K_F8 108.15 50.969 57535 36557 57120 58265 65755 63826 57403 57168 76604 52127 60165 63555 71976 54998 58546 44534 79875 70785 53123 33675 58176 57101 67359 63962 58959 58746 76238 53356 63029 63671 72430 56530 60857 46440 76155 66987 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18457000 22401 341 20993 42168 33922 33922 1 9606 Homo sapiens 0.014443284230196696 RCVMDDDNEVR Unmodified 1407.5871 0.58709702 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 1 2 0 1 32.583 32.643 3 0.041936 6769 20230619_1881_Aki_TMTPro18x_K_F2 49.632 41.721 9526.6 6058.3 9922.7 9843.8 10146 13196 11716 9830.2 13076 10218 10994 14786 11992 11669 11747 12767 19796 15423 8799.8 5582 10053 9666.5 10578 13001 11759 10293 13153 10453 11450 14686 12219 12191 12397 12958 18833 14637 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4885200 22402 4753 20994 42169 33923 33923 1 9606 Homo sapiens -0.1003930427305022 RCVMDDDNEVRDR Oxidation (M) 1694.7101 0.7100657 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 1 2 1.33 0.471 2 1 26.961 26.986 4 0.065181 4959 20230619_1880_Aki_TMTPro18x_K_F1 44.457 38.019 6058.5 4522.2 7252.8 7223.6 5984.7 6680 9450.7 8563.8 10557 9522.6 10462 9161.4 13683 8852.9 9932.3 15051 13043 13525 5608.2 4162.8 7251.9 7065.8 6405.8 6835.5 9359 8646 10684 9562.8 10867 9326.1 13669 9481.7 10366 14922 12453 12861 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 24302000 22403 4753 20995 42170;42171;42172 33924;33925;33926 33925 2901 3 9606 Homo sapiens -0.10950092612438311 RCVMDDDNEVRDR Unmodified 1678.7152 0.71515108 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 2 1.5 0.5 1 1 30.647 30.68 4 1.0639E-08 6254 20230619_1880_Aki_TMTPro18x_K_F1 168.5 148.37 35839 25252 31414 33461 34406 36311 36102 40688 41946 48724 46800 53760 59817 50129 27902 77704 79108 61796 33077 23200 32334 33158 35550 36602 36501 41460 42650 48946 48357 54263 59177 53259 32028 76594 75075 58926 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46132000 22404 4753 20995 42173;42174 33927;33928 33927 2 9606 Homo sapiens -0.0970578874982948 RDAALAVAEAMADK Unmodified 1430.7188 0.71876312 162 A0A024R1U0;P46060;B4DY16;B4E0U0;H0Y4Q3 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 1 7 0 1 57.169 57.224 3 0.00076084 16656 20230619_1887_Aki_TMTPro18x_K_F7 86.798 32.851 60063 40896 49193 60275 40892 61160 54829 54658 85468 66549 61522 73006 101930 83169 48414 122870 106980 121400 55397 37623 50838 59250 43721 61568 55401 56625 84364 66901 66018 74253 100270 87573 53819 122490 101890 115270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27847000 22405 162 20996 42175 33929 33929 1 9606 Homo sapiens 0.02063249086381802 RDAEDAMDAMDGAVLDGR Oxidation (M) 1922.8098 0.80983933 539 J3KP15;Q53FN0;A0A024R8U5;Q01130;B3KUY1;J3QL05;Q8NAK9;Q01130-2 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 yes no 0 1 1 1 0 1 46.649 46.649 3 1.7033E-09 12989 20230619_1880_Aki_TMTPro18x_K_F1 144.72 124.07 15096 14032 14305 18722 14295 15460 12530 15505 23628 18937 18860 25953 29341 21682 14497 37659 33763 37267 13965 12879 14619 18470 14826 15883 13086 15933 23254 19179 20057 25899 28913 23361 16195 37483 32142 35388 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29152000 22406 539 20997 42176 33930 33930 313;314 1 9606 Homo sapiens -0.1146531978913572 RDAESIHQYLLQR Unmodified 1627.8431 0.84305243 2933 P55786;E9PLK3;B7Z899;B7Z4B2;P55786-2;B7Z1H4;B7Z1V9;H0YDG0 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 1 8 0 1 41.345 41.342 4 8.4034E-12 10031 20230619_1888_Aki_TMTPro18x_K_F8 192.63 167.69 26000 17051 22580 25361 22595 25090 24597 25344 28412 26909 25694 35306 29583 27640 22596 35433 41063 46203 23986 15691 23238 24915 23536 25388 24808 25923 28630 27364 26719 35178 29780 29177 24191 36037 39146 43751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39986000 22407 2933 20998 42177 33931 33931 1 9606 Homo sapiens 0.05424462898099591 RDAFTDSAISAK Unmodified 1280.6361 0.63607935 2986 F8W0B5;A0A2R8Y7P6;V9GY86;Q2M2R5;F8WB06;F8VQP2;A0A2R8Y5A6;A0A2R8YDM9;Q99700;A0A2R8Y7E6;H0YH87;A0A5F9ZHX3;A0A5F9ZHW5;Q99700-5;Q99700-2;Q99700-4;A0A5F9ZI57;A0A5F9ZHH4;B3KT59;A0A5F9ZH85 ATXN2 Ataxin-2 yes no 0 0 1 7 0 1 43.361 43.44 3 7.9385E-05 10686 20230619_1887_Aki_TMTPro18x_K_F7 95.98 55.265 98902 71201 95736 101220 101130 113250 106560 99810 114880 115730 133400 121660 125820 104530 111930 127290 131390 119780 91359 65458 97631 99872 104780 113270 107400 103350 117290 116300 135570 122720 127980 109590 115220 127100 125440 113890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126950000 22408 2986 20999 42178 33932 33932 1 9606 Homo sapiens 0.006986753498722464 RDCSTFLR Unmodified 1053.5026 0.50256276 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 1 1 0 1 34.328 34.328 3 0.010519 7717 20230619_1880_Aki_TMTPro18x_K_F1 71.451 14.17 107600 77966 89301 113930 134450 144630 126920 122590 161310 117360 117040 112390 119520 108780 96970 152780 148850 127620 99279 71699 93071 112400 135950 143380 129380 126620 160530 118870 122210 114320 120970 114590 102170 151240 141770 121560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39342000 22409 2484 21000 42179 33933 33933 1 9606 Homo sapiens -0.02204842236778859 RDDAYWPEGK Unmodified 1235.5571 0.55710075 3876 Q14151 SAFB2 Scaffold attachment factor B2 yes yes 0 0 1 4 0 1 44.05 44.094 3 0.00042417 11311 20230619_1883_Aki_TMTPro18x_K_F4 97.911 79.287 46446 35221 42761 42859 52609 55271 54887 55554 62186 53892 56960 51371 52112 52517 56293 57779 139680 73525 42899 32320 43895 42829 53917 54959 55426 56668 62706 54499 58451 52338 53722 54412 61740 58850 132380 69910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35822000 22410 3876 21001 42180 33934 33934 1 9606 Homo sapiens -0.05125551884407287 RDDQDDVSSVR Unmodified 1290.58 0.58002103 1506 A0A994J4X5;A0A3B3ISF0;Q659C4-2;Q659C4;G3V0E9;H0Y9K3;D6R9W6;A0A3B3IT29;D6RJB0;A0A994J4H9;Q659C4-3;Q659C4-9 LARP1B La-related protein 1B yes no 0 0 1 1 0 1 28.836 28.836 3 3.8166E-05 5539 20230619_1880_Aki_TMTPro18x_K_F1 123.26 97.137 12196 8609.1 14343 13116 15127 15477 11092 15350 12949 11835 16353 19198 16159 15459 12097 10410 20744 19677 11284 7922 14390 12906 15530 15464 11500 15587 13219 12369 16622 19011 16323 15804 12838 11068 19757 18595 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9398400 22411 1506 21002 42181 33935 33935 1 9606 Homo sapiens -0.053645775575887455 RDDSDLVR Unmodified 974.47812 0.47812215 4592 Q9NTI5-2;Q9NTI5;B7Z5S1 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 0 0 1 1.5 0.5 1 1 29.987 30.022 3 0.022538 5719 20230619_1881_Aki_TMTPro18x_K_F2 61.593 27.341 20064 14374 20438 25203 31677 34728 27962 28570 35444 26504 33757 44331 36333 37422 31501 24362 48758 49928 18541 13250 20931 24656 31922 34233 28631 29561 35590 27461 34895 43901 36835 38138 33025 26148 46493 47147 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15153000 22412 4592 21003 42182;42183 33936 33936 1 9606 Homo sapiens -0.010137791186593859 RDELTLEGIK Unmodified 1172.6401 0.6401021 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 1 5 0.707 1 2 1 48.117 48.182 2;3 3.8114E-06 13129 20230619_1883_Aki_TMTPro18x_K_F4 164.81 89.433 663570 515500 569180 722280 553550 735670 741310 721840 709780 846890 850580 884400 958540 781400 718720 1124000 1049700 1056800 612670 473700 586990 712220 582210 742070 735640 741890 731110 850000 870830 893090 963560 827600 755580 1118900 1001200 1004400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2709400000 22413 543 21004 42184;42185;42186;42187 33937;33938;33939 33937 3 9606 Homo sapiens 0.060687648435987285 RDEQMEPEPK Unmodified 1257.566 0.56595087 2498 G3V325;B4DJ38;C9JQN9;C9JGL8;B3KMD7;A4D273;O75127 ATP5J2-PTCD1;PTCD1 Pentatricopeptide repeat-containing protein 1, mitochondrial yes no 0 0 1 2 0 1 34.553 34.61 3 0.00057047 7521 20230619_1881_Aki_TMTPro18x_K_F2 102.53 84.944 15872 10661 15212 16095 20500 19979 20130 17081 22733 20750 26796 23451 25957 23464 26598 18861 27652 26028 14655 9811.2 15591 15850 20847 19843 20391 17756 23161 20869 27247 23687 26555 23965 27048 19457 26436 24651 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13171000 22414 2498 21005 42188 33940 33940 1 9606 Homo sapiens -0.052529463102246154 RDEQPSGSVETGFEDK Unmodified 1779.7911 0.79113602 4609 Q9NVV4;Q5T851 MTPAP Poly(A) RNA polymerase, mitochondrial yes no 0 0 1 1.5 0.5 1 1 41.515 41.554 3 1.7145E-14 10513 20230619_1881_Aki_TMTPro18x_K_F2 178.88 120.05 42527 34312 37343 41574 38777 53067 43518 46113 56430 56563 57435 67942 65922 49440 49993 69320 70755 66531 39281 31477 38427 41533 40408 52604 44010 47858 56815 56945 59302 67805 66231 52674 52366 69124 67467 63236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44144000 22415 4609 21006 42189;42190 33941 33941 1 9606 Homo sapiens -0.06756790097028897 RDEWQECPCSSSR Unmodified 1695.673 0.67295192 3333 O94819 KBTBD11 Kelch repeat and BTB domain-containing protein 11 yes yes 0 0 1 2 0 1 33.315 33.373 3 5.6384E-06 7030 20230619_1881_Aki_TMTPro18x_K_F2 126.63 117.58 19060 14992 22132 19312 15470 18160 14835 20158 19536 22808 27645 33459 27139 30837 24260 22368 36021 33274 17644 13763 22104 19144 16589 18495 15182 20520 19967 23223 27995 33359 27639 31421 25355 23238 34332 31498 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16879000 22416 3333 21007 42191 33942 33942 1 9606 Homo sapiens -0.14705764158156853 RDFAPPGQQK Unmodified 1142.5833 0.58325592 2275 B4E1S3;B2R9T9;Q9BVC6 TMEM109 Transmembrane protein 109 yes no 0 0 1 5.33 3.09 1 1 1 37.006 37.022 3 9.1158E-05 8775 20230619_1880_Aki_TMTPro18x_K_F1 133.85 97.521 302090 258180 302740 292090 475920 463890 414050 451690 526760 289030 353970 320950 344280 285950 343870 331510 379010 311450 279420 236640 309980 294570 478650 455890 424370 457610 522610 302220 370680 323560 351740 298500 351510 331370 361830 296280 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 505500000 22417 2275 21008 42192;42193;42194 33943;33944;33945 33943 3 9606 Homo sapiens 0.017667620777501725 RDFNQFIK Unmodified 1066.556 0.55597854 2629;940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370;B7ZAX9;B4DZC0;O60264 SMARCA1;SMARCA5 Probable global transcription activator SNF2L1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 no no 0 0 1 2.5 0.5 1 1 46.619 46.698 3 0.00085503 12894 20230619_1881_Aki_TMTPro18x_K_F2 113.18 74.157 723390 510790 557170 695400 620040 811950 674200 718960 978720 646560 627410 602740 693590 603000 487470 826940 785290 697870 667060 469410 581750 688240 642550 809530 685780 738860 964890 656870 662610 614550 696620 633640 517610 819130 747880 664520 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 567580000 22418 940;2629 21009 42195;42196 33946;33947;33948 33946 3 9606 Homo sapiens 0.025362785373545194 RDFSEIK Unmodified 893.46068 0.46068117 4693 Q9UNY4-2;Q9UNY4 TTF2 Transcription termination factor 2 yes no 0 0 1 6 0 1 40.425 40.517 3 0.056268 9730 20230619_1886_Aki_TMTPro18x_K_F6 60.892 23.333 42547 28181 37202 45065 39157 50895 45654 45618 70692 47042 48610 47819 58568 47619 40012 69915 66923 55623 39255 25955 38325 44162 40815 50856 46401 47009 69647 47559 51312 48565 58608 50293 42659 69007 63693 53024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17659000 22419 4693 21010 42197 33949 33949 1 9606 Homo sapiens 0.009689253463420755 RDGGNPLCTR Unmodified 1144.5407 0.54073918 848 B7Z879;Q658K0;Q53FX3;A0A087WXL6;Q9H270 VPS11;DKFZp564P2364 Vacuolar protein sorting-associated protein 11 homolog yes no 0 0 1 7 0.816 1 1 1 30.208 30.258 3 0.00030788 5765 20230619_1888_Aki_TMTPro18x_K_F8 100.04 79.833 35443 29114 30339 34331 45633 43925 35560 38484 49532 42986 46284 46548 44948 36849 32188 47542 48992 43953 32735 26700 31486 34364 45908 43586 36871 39797 49537 43325 47557 46768 45318 38893 33967 47358 46678 41803 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35735000 22420 848 21011 42198;42199;42200 33950;33951 33951 2 9606 Homo sapiens -0.025749563221324934 RDGSDVIYPAR Unmodified 1247.6258 0.62584901 3503 Q6FI51;Q6FHS4;P25685;A0A7I2V3K7;P25685-2;M0QXK0;M0R080 DNAJB1 DnaJ homolog subfamily B member 1 yes no 0 0 1 5 0 1 35.187 35.277 3 3.2042E-09 7636 20230619_1885_Aki_TMTPro18x_K_F5 174.57 140.19 45197 29119 36131 49186 42811 46915 44262 48419 67530 61161 68548 90443 84693 82517 46912 109560 113650 114520 41667 26842 37635 47947 44044 47623 45263 49716 67513 62043 71074 90228 84288 86744 52396 109730 108100 108720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109090000 22421 3503 21012 42201 33952 33952 1 9606 Homo sapiens 0.011941124153054261 RDGWPAMCIHGDK Oxidation (M) 1557.6817 0.68166611 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 1 1 7 0 1 38.642 38.705 4 0.0511 8762 20230619_1887_Aki_TMTPro18x_K_F7 54.501 35.672 28158 28610 31776 29906 38075 38816 38962 29342 33694 31404 34921 30083 32070 28733 34119 34886 35637 34100 26104 26190 32063 30224 39016 38382 39052 30712 34669 31605 35629 30581 32930 30004 34747 34914 34071 32403 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53280000 22422 1328 21013 42202 33953 33953 836 1 9606 Homo sapiens -0.07486745731057454 RDHALLEEQSK Unmodified 1324.6735 0.67352749 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3 ACTN4 Alpha-actinin-4 yes no 0 0 1 3.5 0.5 1 1 34.117 34.177 4 1.8721E-05 7172 20230619_1883_Aki_TMTPro18x_K_F4 122.7 51.198 132180 22244 117140 144180 152740 111260 143330 149300 181900 159020 197450 193420 199450 169690 136980 197710 181470 193190 121500 21576 120870 134890 155220 115770 146260 150200 183650 161240 201800 194080 200540 177260 143190 197810 173280 183500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 235080000 22423 1069 21014 42203;42204 33954;33955 33955 2 9606 Homo sapiens 0.02417766615508299 RDHFEEAMR Unmodified 1189.5298 0.52984014 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;Q96IF9;Q0IIN5;Q9NTC4;A0A7P0TA22 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 1 4.5 1.5 1 1 30.458 30.521 3 3.8967E-05 5824 20230619_1882_Aki_TMTPro18x_K_F3 152.54 136.32 68689 7433.4 55030 67477 77403 58132 70859 74637 86560 77536 82673 88866 90310 73870 60731 89446 75221 86004 63066 7423.5 57414 62958 78292 59810 72304 75190 87142 78541 85337 89187 90508 77515 63240 89361 71905 81684 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72633000 22424 3656 21015 42205;42206 33956 33956 1 9606 Homo sapiens -0.05734358696440722 RDHFEEAMR Oxidation (M) 1205.5248 0.52475476 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;Q96IF9;Q0IIN5;Q9NTC4;A0A7P0TA22 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 1 1 3 0 1 23.027 23.179 3 0.074346 3769 20230619_1882_Aki_TMTPro18x_K_F3 42.336 28.372 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22425 3656 21015 42207 33957 33957 2356 1 9606 Homo sapiens -0.06978662559049553 RDHRPPCAQEAPR Unmodified 1588.7641 0.76409061 2889 E7EMC7;Q13501;E3W990;B4DE82;E3WH17;Q13501-2;C9JRJ8;E9PFW8 SQSTM1;SQSTM1-ALK Sequestosome-1;Tyrosine-protein kinase receptor yes no 0 0 2 6 0 1 23.047 23.088 4 5.3553E-08 3807 20230619_1886_Aki_TMTPro18x_K_F6 162.41 132.92 17475 8491 16630 21835 22616 23031 22984 25967 28504 21854 26176 24907 25442 23877 20475 25988 26434 24450 16111 7895.1 17085 20940 23021 23241 23322 26207 28607 22409 26917 25129 25775 24760 21267 25984 25220 23247 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34862000 22426 2889 21016 42208 33958 33958 1 9606 Homo sapiens -0.006740876078765723 RDIDNLVQR Unmodified 1127.6047 0.60471964 193 Q53FS4;B2R774;A0A024R2A7;P49257 LMAN1 Protein ERGIC-53 yes no 0 0 1 6 0 1 38.625 38.707 3 0.00032858 8994 20230619_1886_Aki_TMTPro18x_K_F6 123.6 53.233 66956 41293 54656 59044 53656 64083 61964 85004 91563 79497 87213 120600 105460 102830 60493 130430 139750 146790 61723 37993 56561 58247 56161 64855 62961 85178 91401 81875 90636 119940 105110 108050 67064 131310 132990 139230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73972000 22427 193 21017 42209 33959 33959 1 9606 Homo sapiens 0.04602147106470511 RDINVSVGSQQPDTK Unmodified 1642.8275 0.82746195 1543 P50851;P50851-2;A0A494BZW2;A0A494C1L5;E9PEM5;A0A494C0R9 LRBA Lipopolysaccharide-responsive and beige-like anchor protein yes no 0 0 1 6 0 1 39.635 39.723 3 5.5987E-08 9411 20230619_1886_Aki_TMTPro18x_K_F6 138.28 115.4 12287 8552.6 11411 11143 13550 13958 15183 12266 16345 13192 18046 20743 15847 11889 19083 17616 19846 18671 11344 7856.4 11696 11077 13942 13863 15242 12684 16633 13513 18365 20411 16387 12859 19381 17673 18973 17727 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12576000 22428 1543 21018 42210 33960 33960 1 9606 Homo sapiens 0.03176131590385012 RDISSTLIALADK Unmodified 1401.7827 0.78274359 2900 E7ESY4;Q13330-3;Q13330;Q13330-2;H7C3F3 MTA1 Metastasis-associated protein MTA1 yes no 0 0 1 2 0 1 59.847 59.86 3 0.009198 18562 20230619_1881_Aki_TMTPro18x_K_F2 68.044 44.818 34976 30005 38259 36494 35532 37058 36309 36245 47933 40249 36714 39440 47249 40604 42164 51627 53557 49471 32376 27520 38534 36341 37138 37424 36932 37196 47730 40464 38678 40129 47671 42428 43642 51553 51104 47026 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38708000 22429 2900 21019 42211 33961 33961 1 9606 Homo sapiens 0.09792352515000857 RDITLEASR Unmodified 1059.5673 0.5672715 1204 A0A140VJT0;P63151;P63151-2;Q56VW8;A0A590UJY3;A0A590UJJ1;Q6ZP32;E5RFR9 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B yes no 0 0 1 4.5 0.5 1 1 34.256 34.325 3 0.093451 7211 20230619_1883_Aki_TMTPro18x_K_F4 33.87 19.875 67952 41183 73012 83586 88652 96896 78400 94128 123390 60282 95038 110110 97320 93998 91487 86208 139470 134560 62770 38079 74039 81014 90638 96820 81051 95437 121760 64374 99031 108980 99128 97068 95738 89476 132940 127310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116690000 22430 1204 21020 42212;42213 33962 33962 1 9606 Homo sapiens 0.03987055840843823 RDLEGSDIDTR Unmodified 1275.6055 0.6055075 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DM67 CSE1L Exportin-2 yes no 0 0 1 1.5 0.5 1 1 33.902 33.902 3 2.7351E-06 7524 20230619_1880_Aki_TMTPro18x_K_F1 151.16 101.66 55654 40039 49485 51230 56953 62315 54652 57483 70196 58073 63470 60438 64235 56771 52273 68401 75672 64282 51376 36768 50900 50960 58543 62057 55725 59060 70334 58764 65431 61160 65010 59280 54740 68275 72097 61141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68361000 22431 1462 21021 42214;42215 33963;33964 33963 2 9606 Homo sapiens -0.02127103035172695 RDLLFQALGR Unmodified 1187.6775 0.67749065 4414 Q9BR63;Q9NSD9;A8K666 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 1 5 0 1 53.254 53.326 3 1.303E-05 15194 20230619_1885_Aki_TMTPro18x_K_F5 150.22 101.43 134160 98337 91076 104520 90719 129520 109210 118460 220690 26626 17798 21715 23127 21049 42225 36032 37124 23652 123640 90136 96210 105400 95342 128750 112300 119310 209750 32100 28075 22341 24470 22505 42279 35296 35476 22645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62908000 22432 4414 21022 42216 33965 33965 1 9606 Homo sapiens 0.09115900899860208 RDLMACAQTGSGK Oxidation (M) 1409.6391 0.63913259 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;B4E010;O15523-3;C9J081 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 1 1 7.5 0.5 1 1 34.603 34.637 3 0.0017549 7323 20230619_1888_Aki_TMTPro18x_K_F8 101.75 79.922 52222 30512 40614 46626 46931 59199 51446 56153 66092 53483 63418 78129 77742 73121 35806 115410 117740 106690 48113 28103 42365 45901 48482 58790 52064 57494 66357 54977 65852 78121 77057 77758 42106 114540 111790 101470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 89304000 22433 1018 21023 42217;42218 33966 33966 579 1 9606 Homo sapiens -0.049301408592782536 RDLMACAQTGSGK Unmodified 1393.6442 0.64421797 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;B4E010;O15523-3;C9J081 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 1 8 0 1 39.853 39.842 3 6.9002E-05 9427 20230619_1888_Aki_TMTPro18x_K_F8 109.99 87.074 39146 28510 35891 37083 43671 47069 46635 50144 63106 41685 45392 48408 49395 46727 41179 62536 70972 53341 36147 26183 36858 36881 44850 46900 47342 50766 62582 42829 47591 48827 49980 49048 43772 62011 67495 50825 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17658000 22434 1018 21023 42219 33967 33967 1 9606 Homo sapiens -0.03685836996669423 RDLTQMADELRR Unmodified 1502.7624 0.76235927 3575 P41227-2;P41227;C9JN83 NAA10 N-alpha-acetyltransferase 10 yes no 0 0 2 7 0 1 44.037 44.12 4 1.011E-06 10957 20230619_1887_Aki_TMTPro18x_K_F7 148.68 128.59 49466 35405 39012 49906 44369 52124 45984 59066 71545 64740 66797 79062 81471 74546 43688 100820 100740 99381 45624 32547 40647 49219 45809 52674 47081 59977 71251 65572 69416 79490 80998 78397 48553 100620 95830 94413 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72188000 22435 3575 21024 42220 33968 33968 1 9606 Homo sapiens 0.031088585835050253 RDNELIGQTVR Unmodified 1299.6895 0.6895119 2503 B4DJK4;B4E0Q4;B4DZJ7;O00267-2;O00267 SUPT5H Transcription elongation factor SPT5 yes no 0 0 1 4.5 0.5 1 1 36.142 36.211 3 2.8975E-06 8002 20230619_1885_Aki_TMTPro18x_K_F5 128.68 102 41670 36359 44728 48185 48940 54727 48700 53234 65267 59719 59441 53714 63637 47435 48427 56762 68903 74532 38570 33375 45267 47768 50519 54801 49641 54638 65324 59836 61381 54600 64069 49706 50687 57850 65767 70582 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96587000 22436 2503 21025 42221;42222 33969 33969 1 9606 Homo sapiens 0.05165472852422681 RDNSDFDLLTVSETANEPPQDEGNSFNSPR Unmodified 3350.4923 0.49233482 3242 O15371-2;O15371-3;O15371;B4E1K8 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 1 2 0 1 56.331 56.35 3 1.7408999999999998E-40 17132 20230619_1881_Aki_TMTPro18x_K_F2 214.19 212.24 2765.7 1975.9 2990.8 3748.9 1468 2075.4 1375.1 2344.9 2984.2 1580.1 4079.4 4221.8 3618.2 3229.4 2153.7 5658.3 4867.2 5628.9 2557.1 1823.7 3000 3614.8 1649.8 2228.2 1448.5 2359.6 2982.2 1720 4110.7 4142.2 3641.8 3489 2385.6 5633.1 4635.9 5343.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8195400 22437 3242 21026 42223 33970 33970 1 9606 Homo sapiens -0.08889165011942168 RDNTNEIYSGK Unmodified 1295.6106 0.61059288 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348;H7C4N8 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 1 5.5 0.5 1 1 36.399 36.49 3 0.013904 8164 20230619_1886_Aki_TMTPro18x_K_F6 59.227 37.67 31166 19699 27864 31482 31043 36842 31762 33119 37861 37505 39133 43770 36349 35707 34434 44540 50558 45999 28752 18147 28652 30873 32050 36739 32179 34206 38280 37859 39999 43868 37149 37541 35992 44668 48186 43692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175730000 22438 1647 21027 42224;42225 33971;33972 33972 2 9606 Homo sapiens -0.02538799172543804 RDPALNSGVSQKPDPAK Unmodified 1778.9275 0.92751034 3433 P11388;P11388-2;P11388-3;P11388-4 TOP2A DNA topoisomerase 2-alpha yes no 0 0 2 7.5 0.5 1 1 38.846 38.871 4 5.1679E-18 8997 20230619_1888_Aki_TMTPro18x_K_F8 138.66 123.02 147650 111600 124680 133570 117330 154980 128240 126350 169920 178640 187990 163910 206520 154270 133380 187890 162200 149860 136290 102390 128530 133360 123080 154400 130000 132450 171520 177340 192550 166820 206550 161280 138810 186010 154830 142780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 349680000 22439 3433 21028 42226;42227 33973;33974 33974 2 9606 Homo sapiens 0.06920368924147624 RDPAPPGLR Unmodified 977.54066 0.54066282 1039 A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160;Q14160-3;A0A0G2JMS7;Q14160-2;A0PJK8;H0YCG0 SCRIB Protein scribble homolog yes no 0 0 1 7 0.816 1 1 1 32.017 32.061 3 0.000335 6121 20230619_1887_Aki_TMTPro18x_K_F7 119.68 63.422 55496 45276 57457 59029 70047 64918 64615 64843 74047 63561 79030 85501 76185 70656 67490 68229 85413 75908 51329 41564 58385 58562 71520 65225 65770 66227 75060 64984 80761 85271 77484 73209 69768 69047 81484 72052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63891000 22440 1039 21029 42228;42229;42230 33975 33975 1 9606 Homo sapiens 0.05099411740184223 RDPEDSDVFEEDTHL Unmodified 1802.7595 0.75950154 4633 Q9NZ53-2;Q9NZ53 PODXL2 Podocalyxin-like protein 2 yes no 0 0 1 1 0 1 48.612 48.612 2 1.0432E-12 13791 20230619_1880_Aki_TMTPro18x_K_F1 158.3 152.46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22441 4633 21030 42231 33976 33976 1 9606 Homo sapiens -0.10976782850934796 RDPGSAPSLGDR Unmodified 1226.6004 0.60036255 294 A0A087WYJ2;A0A024R4F4;A0A2R8Y705;Q308M6;M0R2B7;P28340;M0QXE6;M0QXQ2 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit yes no 0 0 1 4 0 1 31.404 31.468 3 1.5261E-05 6123 20230619_1883_Aki_TMTPro18x_K_F4 131.79 80.349 35945 19214 27102 28588 29868 33856 30140 35559 46967 32425 45134 46333 49264 39640 30940 51318 53126 55204 33097 17700 28315 28164 30877 33857 30904 36111 46756 33387 46547 46219 49286 41734 33122 51533 50630 52384 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36610000 22442 294 21031 42232 33977 33977 1 9606 Homo sapiens -0.0038736210710794694 RDPGVITYDLPTPPGEK Unmodified 1853.9523 0.95232811 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;A0A140T954 VARS Valine--tRNA ligase yes no 0 0 1 6 0 2 51.937 52.014 3;4 1.7444E-09 14718 20230619_1886_Aki_TMTPro18x_K_F6 137.73 116.27 227290 188520 201220 223660 211350 252580 230100 234960 285350 259600 243440 238420 279760 230420 242980 275470 261320 299610 209990 172890 206890 223370 219530 252790 232620 241880 285950 260490 253280 242770 282600 240460 248920 277340 250120 284180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 516930000 22443 725 21032 42233;42234 33978;33979 33978 2 9606 Homo sapiens 0.059510040068744274 RDPHLACVAYER Unmodified 1485.7147 0.7146808 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;A0A087WX41;P53675-2;P53675 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 1 5.5 0.5 1 1 34.176 34.242 4 6.0337E-06 7315 20230619_1886_Aki_TMTPro18x_K_F6 141.54 112.73 53876 40869 50123 50695 49946 49917 54476 56024 62340 59833 59298 60933 67809 53726 58520 74144 64231 65319 49767 37509 51222 50397 51989 50692 54922 56911 62958 60293 61365 61590 68474 56741 60073 73639 61408 62130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1488999999.9999998 22444 826 21033 42235;42236 33980 33980 1 9606 Homo sapiens -0.008747956166644144 RDPLDEDEDTDISYK Unmodified 1809.7905 0.79046732 4343 Q96EP9 SLC10A4 Sodium/bile acid cotransporter 4 yes yes 0 0 1 1 0 1 48.064 48.064 3 4.241E-11 13551 20230619_1880_Aki_TMTPro18x_K_F1 165.45 155.26 48149 41103 47934 54031 27147 36409 40558 41229 44184 68047 62693 52574 73721 56858 47056 79417 64968 59255 44532 37730 48436 53271 30254 38258 40282 42523 45650 66826 63829 54273 73587 59714 49486 78220 61948 56515 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62077000 22445 4343 21034 42237 33981 33981 1 9606 Homo sapiens -0.08203629536706103 RDPNLFPFEK Unmodified 1261.6455 0.64552182 4569 Q9NQ50 MRPL40 39S ribosomal protein L40, mitochondrial yes yes 0 0 1 7.5 0.5 1 1 52.666 52.739 3 0.00016401 14711 20230619_1888_Aki_TMTPro18x_K_F8 122.42 81.14 270860 223330 226400 282420 262730 301190 305670 300530 357510 282680 265600 225120 286610 235190 269360 311300 315360 289990 250120 204940 234610 280530 271420 303070 307160 306590 357450 285070 277500 231770 291080 246380 276970 310280 301110 275750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 305650000 22446 4569 21035 42238;42239 33982;33983 33983 2 9606 Homo sapiens 0.025164884260675535 RDPQELVASFSER Unmodified 1532.7583 0.75831975 533 A0A024R8R0;J3QQJ0;Q9UHR5-2;Q9UHR5;X6R3T8;J3QLH3;J3KS14;F5H478;B7Z4X9;J3KRU5 SAP30BP SAP30-binding protein yes no 0 0 1 5.5 0.5 1 1 49.783 49.86 3 1.7542E-06 13710 20230619_1885_Aki_TMTPro18x_K_F5 112.24 98.615 57315 48560 53807 61547 39495 53141 50095 50226 61939 65026 63130 72598 79718 62222 57456 78474 81092 98057 52982 44559 54787 60970 42543 54291 50291 51941 62513 65153 65481 72982 79761 65445 60240 79615 77477 92865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199420000 22447 533 21036 42240;42241 33984 33984 1 9606 Homo sapiens 0.013250923614577914 RDPTLLVSVVR Unmodified 1253.7456 0.74557022 18 D6RB59;A0A024QYZ6;O60645;Q69YP2;Q6ZNJ2;H0Y995 EXOC3;DKFZp762K123;FLJ00339 Exocyst complex component 3 yes no 0 0 1 3 0 1 47.307 47.386 3 0.041069 12982 20230619_1882_Aki_TMTPro18x_K_F3 50.149 29.248 38882 31691 38997 43119 43215 43920 44302 38114 37992 43184 46696 35417 42945 37214 39031 36577 40660 49637 35953 29106 39689 42601 44527 44225 44415 39500 39432 43135 47263 36394 43758 38328 39838 37504 38950 46974 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167110000 22448 18 21037 42242 33985 33985 1 9606 Homo sapiens 0.1288472575988635 RDPVVAYYCR Unmodified 1297.6237 0.62374052 851 A0A087WY55;Q9NP79;Q9C063 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes no 0 0 1 1 0 1 39.642 39.642 3 0.00057047 9933 20230619_1880_Aki_TMTPro18x_K_F1 102.53 78.855 90966 54322 121270 117650 176760 168720 132530 184930 141770 75810 142460 166380 94630 122950 145770 67243 165740 140020 84203 50287 121440 114200 177730 167000 136640 184720 143630 85222 144300 163240 100850 125150 147980 72828 158210 132320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37268000 22449 851 21038 42243 33986 33986 1 9606 Homo sapiens -0.013166395941652809 RDQAEEEPNRIPSR Unmodified 1695.8289 0.82885893 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;A0A1U9XBD9;A0A1U9XBC3;Q14676-3;B4DYH4;Q14676-4 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 2 2 0 1 28.66 28.734 4 0.000952 5255 20230619_1881_Aki_TMTPro18x_K_F2 88.768 65.406 6473.1 4270.4 5324 7649.4 5640.9 6431.2 3727 6768.4 9095.3 6527 7428.4 7125.6 8250.3 6985.4 4419.1 10923 10434 10530 5969.4 3939.3 5519.7 7423 5800.6 6597.9 4043.4 6880 8888.9 6633.4 7724.6 7214.8 8220.3 7418 4929.2 10869 9926 10005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8114700 22450 1308 21039 42244 33987 33987 1 9606 Homo sapiens 0.00877765679138065 RDQALTEEHAR Unmodified 1324.6484 0.64837537 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;B4DFY0;B3KUX9;A1L0V1;B7Z2W3;H0YJ11 ACTN1 Alpha-actinin-1 yes no 0 0 1 1.5 0.5 1 1 23.112 23.148 4 2.066E-05 3805 20230619_1881_Aki_TMTPro18x_K_F2 130.1 113.32 284370 172750 226690 260830 313970 383210 295470 331070 402110 348060 364220 357620 329260 281730 365280 258170 445180 330080 262080 159050 236650 257580 319360 376760 302260 342040 401970 351250 373960 359790 338990 291980 374550 264240 424370 313170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1565399999.9999998 22451 387 21040 42245;42246 33988 33988 1 9606 Homo sapiens -0.0009628818706914899 RDQDNMQAELNR Oxidation (M) 1504.6689 0.66885282 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 1 1 1 0 1 27.209 27.209 3 0.039109 4905 20230619_1880_Aki_TMTPro18x_K_F1 75.479 62.711 6141.7 3359.4 6082.6 7947.8 6196 6987.6 6050.3 7512.3 9808.5 8027.2 9483.6 6928.4 8089 7930.4 8817.8 10001 8218.3 6671.4 5666.8 3116.3 6196 7626 6431.9 7142 6229.3 7649.7 9757.6 8057.3 9666.9 7133.1 8341 8247.4 8927.2 9829 7858.3 6377.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14640000 22452 2727 21041 42247 33989 33989 1635 1 9606 Homo sapiens -0.06329485589549222 RDQDNMQAELNR Unmodified 1488.6739 0.67393819 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 1 2.5 0.5 1 1 33.385 33.447 3 2.5076000000000002E-24 7037 20230619_1881_Aki_TMTPro18x_K_F2 213.73 189.23 60988 47690 58051 63879 54683 65897 68209 65879 73748 70866 81653 76918 83049 71382 68563 79385 88804 86836 56356 43800 59212 63197 57475 66457 68169 67452 75105 71544 83419 77654 84046 74246 71149 80034 84758 82406 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107560000 22453 2727 21041 42248;42249 33990;33991 33990 2 9606 Homo sapiens -0.05085181726940391 RDQNYPGAIAIHHPNVAEK Unmodified 2129.0766 0.076634197 2782 CON__P15636 yes yes 0 0 1 7.4 0.8 1 1 3 47.589 47.617 4;5 1.4042999999999998E-19 8709 20230619_1887_Aki_TMTPro18x_K_F7 176.67 142.06 + 802620 545770 794070 658140 1028200 880330 896750 1051300 1192200 818640 1107600 1190600 795230 815140 1014800 966400 958010 1033300 741310 501000 809710 659010 1044400 877810 921260 1055200 1192700 851240 1127500 1179100 832890 860270 1024700 972720 917690 980420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 23274000000 22454 2782 21042 42250;42251;42252;42253;42254 33992;33993;33994 33992 3 0.05725894546958443 RDQNYPGAIAIHHPNVAEKR Unmodified 2285.1777 0.17774523 2782 CON__P15636 yes yes 0 0 2 2 0 1 36.054 36.111 5 1.6241E-07 8136 20230619_1881_Aki_TMTPro18x_K_F2 105.16 97.268 + 27030 22646 27590 21741 47979 25070 36097 35288 35551 27311 34012 29335 22355 22686 36161 24559 31120 24113 25002 20729 28218 22119 47669 25421 37061 35119 36164 28085 34455 29480 23863 23699 36184 24667 29775 22933 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55774000 22455 2782 21043 42255 33995 33995 1 0.08656346249699709 RDREEDEEDAYER Unmodified 1710.7081 0.70813467 3611 P49756;Q16083 RBM25 RNA-binding protein 25 yes no 0 0 2 1 0 1 28.256 28.256 3 0.0028097 5316 20230619_1880_Aki_TMTPro18x_K_F1 87.498 74.085 2081.5 1965.6 1687.9 2726.8 2537 3576.6 2774.5 2322.8 4802.2 3635.6 3818.5 4652.6 3950.7 2195.8 2282 2441 3814.1 6071.9 1923.5 1804.7 1768 2698.4 2585.5 3520.9 2842 2496.7 4734.3 3637.3 3971.7 4585.3 3942.1 2370.2 2435.8 2649.9 3650.2 5720.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2195300 22456 3611 21044 42256 33996 33996 1 9606 Homo sapiens -0.11879106824972041 RDSDIQQLQK Unmodified 1229.6364 0.6364137 784 A0A024RDY7;U4PSC4;Q9NPJ6;Q5T911;Q9NPJ6-2 MED4 Mediator of RNA polymerase II transcription subunit 4 yes no 0 0 1 5.5 0.5 1 1 38.485 38.572 3 0.0031914 8940 20230619_1885_Aki_TMTPro18x_K_F5 79.311 43.431 56996 42539 51173 68848 62094 62644 58350 65394 69679 68866 76778 82101 67644 66612 70071 73074 86246 81090 52629 39165 52727 67228 63516 63863 59428 66718 70627 69799 78083 82198 69521 69524 72117 73776 82328 76954 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58938000 22457 784 21045 42257;42258 33997 33997 1 9606 Homo sapiens 0.030780950697590015 RDSFDDR Unmodified 909.39406 0.39405816 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 1 1.5 0.5 1 1 28.548 28.585 3 0.01763 5153 20230619_1881_Aki_TMTPro18x_K_F2 91.069 15.214 74570 33356 79292 93527 114100 128070 109520 108640 124690 94136 142770 163340 128790 120710 113710 60641 164650 162070 68793 31090 80783 89797 115650 126290 111150 111960 126710 98063 145140 161020 131270 122800 118390 67768 157030 152870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37769000 22458 1059 21046 42259;42260 33998;33999 33999 2 9606 Homo sapiens -0.0642631021556781 RDSFDNCSLGESSK Unmodified 1600.6787 0.6787488 4071 Q5UIP0-2;Q5UIP0 RIF1 Telomere-associated protein RIF1 yes no 0 0 1 3.5 0.5 1 1 40.682 40.733 3 6.2061E-08 9864 20230619_1883_Aki_TMTPro18x_K_F4 144.88 137.25 45920 33481 37569 43582 36506 40705 38087 36015 47338 55221 53603 52219 62472 39617 18963 64192 63690 57748 42368 30749 38873 43132 38087 41276 38609 37649 48005 54674 55003 52734 61359 42638 22765 63603 60464 54939 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71573000 22459 4071 21047 42261;42262 34000 34000 1 9606 Homo sapiens -0.0975634237486247 RDSPLQGSGQQNSQAGQR Unmodified 1912.91 0.9099628 1017 E7EN19;Q53TX8;A0A0D9SEY1;B7Z388;O95819-3;O95819-6;G5E948;V9HWH3;O95819-2;B7Z3V5;O95819;O95819-5;H7C360;O95819-4;E7ENQ1;Q5MD60;E7EX83;H7C0P6 MAP4K4;HEL-S-31 Mitogen-activated protein kinase kinase kinase kinase 4 yes no 0 0 1 6 0 1 28.419 28.451 3 2.6268E-09 5248 20230619_1886_Aki_TMTPro18x_K_F6 123.14 103.56 7741.6 5172.6 5054.8 7056 7156.1 5877.3 4875.2 6687.4 7433.3 7414.4 10262 6914.5 7929.3 8212.1 5533.5 6764.3 8611.1 7367.7 7129.7 4754.8 5396.9 6952.6 7202.8 6056.1 5134.6 6792.1 7536.9 7440.6 10264 7097.2 8063.1 8347 5845.3 6853.1 8200.7 6996 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13186000 22460 1017 21048 42263 34001;34002 34002 2 9606 Homo sapiens -0.009975783487334411 RDSQADDPENIK Unmodified 1386.6375 0.63753591 949 A0A0A0MSA7;A0A8I5QJH9;A0A804HJV5;A0A8J9G7U8;A0A8I5KT99;A0A0U1RQK7;Q59GJ0;A0A8I5KV92;O43432-4;O43432;O43432-3;B4DZE1;B4DH17 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 yes no 0 0 1 2 0 1 36.042 36.099 3 0.0026644 8143 20230619_1881_Aki_TMTPro18x_K_F2 74.29 33.072 33091 18691 30075 35370 39533 36147 35027 40090 43059 37979 48641 60070 50514 43946 34995 37518 68810 65020 30516 17269 30965 34331 40154 36574 35843 40627 43616 39158 49777 59372 50798 45547 37731 39336 65484 61479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21755000 22461 949 21049 42264 34003 34003 1 9606 Homo sapiens -0.04031735352009491 RDSVLTSK Unmodified 904.49779 0.49779495 3321 O75937 DNAJC8 DnaJ homolog subfamily C member 8 yes yes 0 0 1 5.33 3.09 1 1 1 36.079 36.098 3 0.0012776 7887 20230619_1888_Aki_TMTPro18x_K_F8 118.03 86.099 447430 262990 474850 482320 644310 621470 582090 580510 650530 432420 598530 475110 491960 429690 527890 274860 577820 445770 413210 242820 482600 470540 653400 616730 592570 591860 655830 446670 611120 479010 507260 436780 537420 289190 551460 422070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 702310000 22462 3321 21050 42265;42266;42267 34004;34005 34005 2 9606 Homo sapiens 0.041725968920900414 RDVDFELIK Unmodified 1133.6081 0.60807369 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 1 5.5 0.5 1 1 51.187 51.263 3 0.0018361 14316 20230619_1885_Aki_TMTPro18x_K_F5 84.658 30.902 67967 63528 70001 82023 75272 116710 112840 74057 96599 90675 88718 85964 90472 67761 79925 94322 92302 95609 62919 58286 71176 81698 78958 114310 110950 79154 98990 90662 91471 86873 91731 71957 82223 94381 88217 90784 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171180000 22463 2633 21051 42268;42269 34006 34006 1 9606 Homo sapiens 0.04661397160452907 RDVFLER Unmodified 933.50321 0.50321468 1633 A0A6Q8PGB0;P24928;P24928-2 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 1 5 0 1 37.818 37.911 3 0.082216 8663 20230619_1885_Aki_TMTPro18x_K_F5 47.574 11.005 27158 22635 28256 25656 32179 30620 34279 27989 35704 29206 38743 40332 33460 32456 34880 31364 40399 40864 25124 20749 28652 25740 33122 30547 34474 28831 36375 29803 39394 40163 34415 33669 35728 32082 38604 38710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5446800 22464 1633 21052 42270 34007 34007 1 9606 Homo sapiens 0.03380320474570908 RDVQEIFR Unmodified 1061.5618 0.56179219 724;3204 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;F6TRA5;Q59G92;A0A0A0MT12;B4DIJ6;F6S4E6;B4DIZ8;A0A140T973;A0A140T9K1;A0A140T9L4;O00148;B4DX78;O00148-2;K7EQN7;A0A024R7H0;O00148-3 DDX39B;hCG_2005638;DDX39A;DDX39 Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A no no 0 0 1 6.5 0.5 1 1 41.025 41.106 3 0.0012935 9684 20230619_1887_Aki_TMTPro18x_K_F7 110.14 40.712 270360 221930 243980 283040 268210 316360 301120 291190 316520 268390 269010 254670 273210 226340 249610 327300 278790 258070 249800 203680 250680 281180 277750 316720 302120 298660 319590 272140 278350 258440 277610 239680 256280 323190 266320 245930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 621320000 22465 724;3204 21053 42271;42272 34008 34008 1 9606 Homo sapiens 0.03347377049044553 RDVTQLDPNK Unmodified 1184.6149 0.61494998 2145 A8K9X5;Q9UNN5;Q9UNN5-2;B4DEJ6 FAF1 FAS-associated factor 1 yes no 0 0 1 5.5 0.5 1 1 38.942 39.029 3 0.011449 9188 20230619_1886_Aki_TMTPro18x_K_F6 68.536 40.137 32366 21651 29514 31044 32348 33342 34579 32400 38117 37013 41170 38219 39098 33453 30848 41637 44154 41831 29872 19913 30269 30602 33424 33518 34845 33296 38748 37199 41974 38602 39590 35097 32307 41688 42102 39738 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184750000 22466 2145 21054 42273;42274 34009 34009 1 9606 Homo sapiens 0.030027100410279672 RDYDDMSPR Unmodified 1153.4822 0.48222124 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;B3KU16 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 1 2.5 0.5 1 1 32.281 32.35 3 2.3486E-06 6589 20230619_1881_Aki_TMTPro18x_K_F2 162.36 140.36 32505 31551 31435 33789 40122 43676 43641 38756 46436 43900 55154 55940 53576 47740 46253 52073 63122 56604 30084 28892 32174 34077 41073 43316 43870 40083 47473 44467 56108 55971 54410 49731 48121 52501 60186 53738 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80284000 22467 1865 21055 42275;42276 34010 34010 1 9606 Homo sapiens -0.08838057687285072 RDYEVDGR Unmodified 1008.4625 0.46247208 990 A0A0C4DFT3;A0A590UKA8;A0A590UJ18;Q12959-5;Q12959-3;A0A590UJD9;A0A590UJ68;Q12959-6;A0A590UJS9;A0A590UJC5;Q12959-7;Q12959-2;Q12959;A0A590UJR5;A0A590UJ08;Q12959-4;Q12959-9;A0A590UJ29;Q12959-8;C9JUA9;A0A590UJR4;A0A590UJX2;A0A590UK81;Q59FC4;A0A590UK48;B4DF78;A0A590UJ81;A0A994J7Q5;A0A5F9ZH92;E9PIW2;A0A994J587;A0A994J822;A0A994J7P1;A0A994J819;F8VYC1;B7Z395;A0A3B3ITF1;H7C325;A0A3B3ISW2;F8W750;E9PIJ9;B7Z646;B5MCC5;E9PN83;Q15700-3;Q15700;Q15700-4;Q15700-2;Q8N3T5;B7Z264;A0A994J5T6;B7Z2T4;Q15700-5 DLG1;DLG2;DKFZp761P0818 Disks large homolog 1;Disks large homolog 2 yes no 0 0 1 1.5 0.5 1 1 29.192 29.228 3 0.0024278 5712 20230619_1880_Aki_TMTPro18x_K_F1 108.57 89.794 53303 39053 55358 68226 102650 97581 89615 91989 106180 77003 101100 93389 89030 85792 74960 59055 103520 91379 49271 35996 56852 66817 102410 96297 91576 93928 106910 79184 103360 93786 90668 87332 77948 61657 98691 86495 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47547000 22468 990 21056 42277;42278 34011;34012 34011 2 9606 Homo sapiens -0.041420656357104235 RDYLHYIR Unmodified 1134.5934 0.59342667 3713 P62280;M0QZC5;M0R1H5 RPS11 40S ribosomal protein S11 yes no 0 0 1 2.5 0.5 1 1 39.067 39.127 3 0.00077243 9242 20230619_1882_Aki_TMTPro18x_K_F3 128 62.749 132020 110720 115410 108920 126470 140130 140990 132950 171480 46429 40127 34044 41237 33499 70680 43382 46584 32269 121970 101370 118750 110650 130970 139200 142130 134020 167320 51426 47437 35206 43491 35098 69866 42909 44705 30820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 305640000 22469 3713 21057 42279;42280 34013 34013 1 9606 Homo sapiens 0.0315136980295847 RDYTGCSTSESLSPVK Unmodified 1785.8203 0.82032766 2072 Q9UEL4;Q5U0H8;A8K5D4;O95297-4;O95297-2;O95297 MPZL1 Myelin protein zero-like protein 1 yes no 0 0 1 7 0 1 41.918 41.989 3 6.2774E-11 10074 20230619_1887_Aki_TMTPro18x_K_F7 149.22 139.47 17741 10156 15213 18012 15077 23996 19553 23792 27170 21749 18631 31387 26624 23760 12693 45420 44350 52893 16354 9374.3 15691 17608 15870 23769 19690 24251 26904 22387 19933 31176 26316 25908 15083 45591 42187 50127 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23108000 22470 2072 21058 42281 34014 34014 1 9606 Homo sapiens -0.04114969072384156 RDYVPDR Unmodified 919.45118 0.45117911 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 1 3.5 0.5 1 1 30.053 30.133 3 0.008598 5611 20230619_1883_Aki_TMTPro18x_K_F4 96.948 55.961 150890 110220 145840 154750 198210 192510 177060 197530 233010 164360 193340 190970 191500 170580 180380 165740 230570 193920 139390 101310 149380 153090 201070 191920 181480 200470 232410 168820 200130 191990 195100 176370 186280 168290 219870 184020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72741000 22471 3610 21059 42282;42283 34015;34016 34016 2 9606 Homo sapiens -0.011768429391963764 REACTCPYCK Unmodified 1343.5421 0.54206108 2728 C4PGM0;Q59EY3;P08047-3;P08047-2;P08047 Sp1;SP1 Transcription factor Sp1 yes no 0 0 1 8 0 1 34.221 34.213 3 0.017053 7178 20230619_1888_Aki_TMTPro18x_K_F8 58.978 46.618 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22472 2728 21060 42284 34017 34017 1 9606 Homo sapiens -0.1159682633990542 READGSETPEPFAAEAK Unmodified 1803.8275 0.82752153 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 1 1 0 1 43.482 43.482 3 0.00040596 11624 20230619_1880_Aki_TMTPro18x_K_F1 79.805 61.888 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22473 1229 21061 42285 34018 34018 1 9606 Homo sapiens -0.042239132003032864 REAPVDVLTQIGR Unmodified 1452.8049 0.80487601 2275 B4E1S3;B2R9T9;Q9BVC6 TMEM109 Transmembrane protein 109 yes no 0 0 1 8 0 1 49.228 49.3 3 2.6657E-21 13197 20230619_1888_Aki_TMTPro18x_K_F8 225.55 168.64 211910 165980 177740 223980 216580 304150 235640 284530 345960 278600 283100 350620 371680 315840 224450 406470 372710 422690 195630 152450 184370 222360 223220 300760 239880 291670 343590 284230 297530 351520 369730 331710 240030 407330 355520 401110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1136400000 22474 2275 21062 42286 34019 34019 1 9606 Homo sapiens 0.0965857698340642 REASSSSPEAGEGQIR Unmodified 1659.7812 0.78124004 3150 J3QSS7;Q86U28-2;Q86U28 ISCA2 Iron-sulfur cluster assembly 2 homolog, mitochondrial yes no 0 0 1 2 0 1 28.829 28.901 3 1.1057E-05 5301 20230619_1881_Aki_TMTPro18x_K_F2 103.88 83.212 3172 1606.9 3163.7 1990.9 3174.5 4073.6 2927 2776.4 2974.2 1740.8 3692.3 3416.5 3555 3239.5 3292.4 3545.2 4098.5 2868.9 2926 1477.8 3207.8 2007.7 3294.2 3929.1 2969.2 2898 3048.6 1869.6 3746.7 3392.3 3622.1 3359.6 3397.9 3520.1 3905.1 2736.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7145600 22475 3150 21063 42287 34020 34020 1 9606 Homo sapiens -0.022259333117290225 REATADDLIK Unmodified 1130.5932 0.5931519 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;A0A7P0TB30;B4DSA8;B4DZP5;Q16531-2 DDB1 DNA damage-binding protein 1 yes no 0 0 1 3.5 0.5 1 1 41.205 41.256 3 0.0020101 10054 20230619_1882_Aki_TMTPro18x_K_F3 87.667 26.017 172810 110170 130080 171090 146830 191780 169290 189480 258400 202960 220490 243900 242620 225150 152550 332680 299140 269880 159240 101450 136240 167910 152310 192130 172100 194040 256500 205780 228960 245320 242980 238320 165790 328500 284590 257100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309980000 22476 1710 21064 42288;42289 34021 34021 1 9606 Homo sapiens 0.033079052924676944 REAWASK Unmodified 846.4348 0.43480077 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 1 4.5 3.5 1 1 36.153 36.146 3 0.0078887 8416 20230619_1880_Aki_TMTPro18x_K_F1 103.8 69.987 327770 203910 320830 314890 346920 411470 340950 375010 448870 328570 397750 336320 345320 295090 362490 225160 399400 285800 302580 187780 326860 310040 358560 407640 347560 384220 448630 335040 407800 339670 354940 302160 369500 231320 381000 271230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144800000 22477 1091 21065 42290;42291 34022;34023 34022 2 9606 Homo sapiens 0.005440758947088398 RECPSDECGAGVFMASHFDR Oxidation (M) 2342.9467 0.94668394 1332 Q5RKT7;A0A248RGE3;P62979;B2RDW1;Q8WYN9 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a yes no 0 1 1 3.5 0.5 1 1 40.291 40.341 4 0.018663 9681 20230619_1883_Aki_TMTPro18x_K_F4 58.107 58.084 61791 50708 62588 71545 68758 75454 70668 70872 90046 67129 66118 58027 70400 49855 64931 63459 63842 57058 57144 46590 63659 70561 71005 75880 71728 72626 89630 67815 69095 59074 71391 52463 66050 63205 61047 54287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55755000 22478 1332 21066 42292;42293 34024 34024 843 1 9606 Homo sapiens -0.17107153901042693 RECPSDECGAGVFMASHFDR Unmodified 2326.9518 0.95176931 1332 Q5RKT7;A0A248RGE3;P62979;B2RDW1;Q8WYN9 RPS27A;HEL112 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a yes no 0 0 1 4 0.816 1 1 1 44.652 44.717 4 1.062E-29 11580 20230619_1883_Aki_TMTPro18x_K_F4 206.11 197.46 49921 41401 47929 59623 46051 49006 48192 50476 60436 55514 42571 40701 69266 51943 41322 80222 75003 78788 46149 38046 48887 58546 48049 50389 48855 51614 60217 55413 45646 42448 68523 54760 44583 79941 71463 74834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255440000 22479 1332 21066 42294;42295;42296 34025 34025 1 9606 Homo sapiens -0.15862850038411125 REDAEHNLVLFR Unmodified 1497.7688 0.76882486 2433 B3KWQ6;P41219;P41219-2;F8W835 PRPH Peripherin yes no 0 0 1 4.5 0.5 1 1 42.054 42.118 4 0.00019127 10456 20230619_1883_Aki_TMTPro18x_K_F4 106.01 80.069 144440 107400 126000 149710 184450 219950 172130 181170 234160 173040 210300 220310 186720 174650 177060 193970 235800 251360 133350 98706 130590 148530 186920 216080 176130 187490 233850 176890 215900 219960 191050 182670 183550 197760 225150 238070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198480000 22480 2433 21067 42297;42298 34026 34026 1 9606 Homo sapiens 0.0398511980654348 REDFEAR Unmodified 921.43044 0.43044367 912 B2RUU3;A0A2X0U2H5;A0A096LNH6;Q14185;E7EPK2;G5E9Y8;Q6V702-3;Q6V702;Q6V702-1 DOCK1;C4orf22 Dedicator of cytokinesis protein 1;Uncharacterized protein C4orf22 yes no 0 0 1 1.5 0.5 1 1 29.641 29.675 3 0.012682 5889 20230619_1880_Aki_TMTPro18x_K_F1 91.318 35.642 40874 27276 44188 31165 51015 43175 40005 45078 46127 39828 52611 51260 50921 42564 47674 37989 60109 51526 37777 25027 44610 31354 52050 42830 41206 45751 46884 40881 53589 51221 51871 43968 49161 39044 57332 48828 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17129000 22481 912 21068 42299;42300 34027;34028 34027 2 9606 Homo sapiens -0.03341433318860254 REDIFYTSK Unmodified 1157.5717 0.57168818 3794;3964 Q04828;H0Y804;B4DK69;P52895;A6NHU4;Q59GU2;P17516;B4E0M1;B4DKT3;S4R3D5;S4R3P0;P52895-2;Q2XPP3;S4R3Z2;A0A0A0MSS8;P42330 AKR1C1;AKR1C2;AKR1C4;AKR1C3 Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C3 no no 0 0 1 6.5 0.5 1 1 44.345 44.433 3 8.7661E-05 11075 20230619_1887_Aki_TMTPro18x_K_F7 141.88 105.93 268580 228660 305750 494650 888970 1074600 1861500 2336000 1569000 477890 689120 799290 584680 662360 658820 671780 737120 841680 248690 211350 319150 485910 902150 1069400 1809400 2246100 1574700 591790 745330 793770 605290 687460 673070 684450 705240 797250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1034099999.9999999 22482 3794;3964 21069 42301;42302 34029;34030 34030 2 9606 Homo sapiens -0.0007947973626869498 REDLVEEIK Unmodified 1129.5979 0.59790293 1641 P12081;P12081-4;E7ETE2;A0A6Q8PHA5;A0A6Q8PFF2;Q52NV4;P12081-2;P12081-3;A0A6Q8PHE3;B4DDD8;B3KWE1;B4E1C5;A0A6Q8PF07;A0A6Q8PHQ0 HARS;HRS Histidine--tRNA ligase, cytoplasmic yes no 0 0 1 2.5 0.5 1 1 45.971 46.049 3 0.00059943 12342 20230619_1882_Aki_TMTPro18x_K_F3 112.13 62.414 311260 212340 253420 293100 270790 339930 323680 336730 329770 353890 411820 449420 460910 363080 362410 364970 452980 502710 287070 195200 262820 289880 281740 339910 323570 344660 338940 359510 421000 448770 463980 377780 375260 374430 432880 475840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 617070000 22483 1641 21070 42303;42304 34031 34031 1 9606 Homo sapiens 0.03828789435215185 REDLVVAPAGITLK Unmodified 1480.8613 0.86132826 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5;B7Z1G4;Q6QE17 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 0 1 4.5 3.5 1 1 53.792 53.827 3 9.652E-06 15939 20230619_1880_Aki_TMTPro18x_K_F1 118.19 68.823 179230 148760 186690 151900 140380 194470 160940 154560 216080 188600 228250 208790 199940 197080 199070 243680 217760 292040 165800 136240 188140 153840 150420 192490 162890 161580 217310 189540 232220 210820 205120 206100 203760 246660 208680 276600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 966290000 22484 1454 21071 42305;42306 34032;34033 34032 2 9606 Homo sapiens 0.14013204820048486 REDPISAGSR Unmodified 1086.5418 0.54178503 4161 Q7Z2K8;Q7Z2K8-2 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes no 0 0 1 3.5 0.5 1 1 28.872 28.958 3 0.00015483 5213 20230619_1882_Aki_TMTPro18x_K_F3 107.03 63.584 54754 43585 57739 58951 48042 54495 55371 56029 77130 64478 79653 77276 72032 64781 75746 60151 89983 81312 50644 40031 58263 58214 50907 55472 56102 57381 77367 65125 81258 77425 73971 67002 77649 61762 85897 77038 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29615000 22485 4161 21072 42307;42308 34034;34035 34034 2 9606 Homo sapiens 0.0019758131841172144 REDPSFER Unmodified 1034.4781 0.47812215 4613 Q9NWH9;H7C3F4;A0A024R5U7;A0A024R5X3;Q9NWH9-3;H0YMM0 SLTM SAFB-like transcription modulator yes no 0 0 1 1.5 0.5 1 1 30.238 30.272 3 0.0032564 6109 20230619_1880_Aki_TMTPro18x_K_F1 96.618 72.768 105990 78473 96565 105620 135970 135090 117290 125710 145340 113170 135020 135830 144240 121790 129270 138630 162250 137600 97880 72091 99504 104790 137560 134160 120220 128700 145980 115810 139420 136450 146240 126970 133570 138970 154750 130790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 236260000 22486 4613 21073 42309;42310 34036;34037 34036 2 9606 Homo sapiens -0.03773779118660059 REEEEDFIR Unmodified 1221.5626 0.56258006 4113 Q6NX51;Q96A65;B7Z321;B7Z689;B7Z502 EXOC4 Exocyst complex component 4 yes no 0 0 1 1.5 0.5 1 1 37.446 37.476 3 0.00071803 8993 20230619_1880_Aki_TMTPro18x_K_F1 107.21 70.512 76408 53739 69099 75626 91202 101300 95266 84226 96491 80522 106060 94915 87332 71032 103810 82780 87887 85239 70534 49404 71187 74871 93094 100070 95821 87153 98511 82043 107520 94939 90455 74685 104280 83214 84226 80944 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160620000 22487 4113 21074 42311;42312 34038 34038 1 9606 Homo sapiens -0.03933873092591966 REEEEENVQSEWR Unmodified 1718.7496 0.74960556 1605 A0A6I8PIX7;O95425-2;O95425-4;O95425-3;O95425;A0A0J9YWY6;B4E3N7;B4E3H1 SVIL Supervillin yes no 0 0 1 1 0 1 37.183 37.183 3 4.2649E-11 8872 20230619_1880_Aki_TMTPro18x_K_F1 184.21 158.56 8339.3 7996 8942.9 10377 13222 14116 14526 17168 18840 15586 11395 13142 17252 9620.1 10564 12908 14072 15538 7724 7335.9 9111.1 10334 13430 14056 14696 17267 18659 15760 12302 13321 17075 10245 11066 13057 13441 14725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26535000 22488 1605 21075 42313 34039 34039 1 9606 Homo sapiens -0.08101926065683074 REEEEFNTGPLSVLTQSVK Unmodified 2162.0855 0.085527128 3719 P62316;P62316-2;K7ERG4 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 0 0 1 6 0.816 1 1 1 60.672 60.722 3 3.4741E-39 18318 20230619_1886_Aki_TMTPro18x_K_F6 244.52 195.06 121110 103920 121110 131970 113580 156360 129620 126580 167090 155820 155360 169460 183880 153360 154560 189890 163270 213610 112020 95359 123020 131250 119310 155500 130930 132180 167650 156400 161270 170860 185360 160720 158370 191440 156480 202450 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 816740000 22489 3719 21076 42314;42315;42316 34040;34041;34042 34042 3 9606 Homo sapiens 0.05096778602091945 REEEEQQEGGFASPR Unmodified 1747.7762 0.77615466 809 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2;B4E0F9;A0A087WWG9 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 0 0 1 1 0 1 32.995 32.995 3 3.1513E-11 7183 20230619_1880_Aki_TMTPro18x_K_F1 153.22 134.81 26023 16669 23394 25150 20252 29906 25506 24222 32378 28717 32525 37452 40748 35175 25598 46859 47506 44174 24010 15343 23956 24748 21503 29719 25627 25268 32591 29066 33736 37565 40637 36962 27621 46683 45218 41997 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35267000 22490 809 21077 42317 34043 34043 1 9606 Homo sapiens -0.06782237174343209 REEETLDTIK Unmodified 1232.6248 0.62484596 3102 Q9NUU7;I3L0H8;Q9UMR2;Q9UMR2-4;Q9UMR2-2;A0A0U4B4U6;F6QDS0;H3BQK0;Q53G16;Q7Z4W5;Q9HBZ9;Q2NL95;B4DS24;Q69YM2;I3L352;Q68DY7;B4DL69;A0A024QZ90;Q59FQ9;Q9UMR2-3;Q9NUU7-2 DDX19A;DDX19B;DKFZp762C1313;DKFZp686C21137;hCG_1998531 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B yes no 0 0 1 2.5 0.5 1 1 41.862 41.932 3 8.0307E-05 10692 20230619_1881_Aki_TMTPro18x_K_F2 125.46 61.16 187460 147140 202090 177850 226530 247310 222480 222190 294540 234120 300940 335030 313210 308920 256270 323420 361720 387380 173410 134990 204300 178060 233310 244240 226800 229020 295980 239220 309150 334670 316970 320110 267790 328150 345250 367170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 169890000 22491 3102 21078 42318;42319 34044 34044 1 9606 Homo sapiens 0.017838532557561848 REEFIQK Unmodified 948.50288 0.50288033 3408 Q6IAX9;P08240-2;P08240 SRPR Signal recognition particle receptor subunit alpha yes no 0 0 1 5.5 0.5 1 1 39.13 39.217 3 0.040729 9202 20230619_1886_Aki_TMTPro18x_K_F6 73.616 25.701 83021 50331 49105 75310 62093 85068 71431 81027 121640 95908 95912 131840 138670 127890 71311 183930 183680 183620 76383 46337 53080 74057 64044 85110 72991 83442 120020 97313 101620 132130 137200 134950 80519 183540 174660 174410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73877000 22492 3408 21079 42320;42321 34045 34045 1 9606 Homo sapiens 0.02656900754709568 REEFVSIK Unmodified 1006.5447 0.54474515 708 A0A024RC67;O43663-3;O43663-2;O43663-4;O43663;H0YM42;B4E238 PRC1 Protein regulator of cytokinesis 1 yes no 0 0 1 7 0 1 43.403 43.482 3 0.012467 10690 20230619_1887_Aki_TMTPro18x_K_F7 67.081 33.703 185720 136180 154880 177210 139720 203080 167270 160360 231770 221280 222910 230470 283270 229320 169280 298690 260990 269450 171380 125060 159860 175850 147650 202280 169050 168440 232150 220790 231650 233620 281790 240260 179920 297000 248890 256210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54871000 22493 708 21080 42322 34046 34046 1 9606 Homo sapiens 0.0417345644324314 REEGDTEPLLK Unmodified 1285.6514 0.65139506 2333 B4DYK9;B7ZMH1;B2RWN6;F5H1N7;B7ZVZ4;A0A2R8Y6P1;Q6ZU35 KIAA1211 Uncharacterized protein KIAA1211 yes no 0 0 1 2.5 0.5 1 1 41.154 41.221 3 0.0006886 10339 20230619_1881_Aki_TMTPro18x_K_F2 86.028 25.464 215930 163230 217710 229330 260130 267500 261540 259880 271360 237130 311230 338020 268940 244090 285170 257260 343650 317750 199580 150010 221700 226620 266680 267410 263970 265460 277260 243910 315830 335290 276750 255510 292750 261810 328060 301250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 90612000 22494 2333 21081 42323;42324 34047;34048;34049 34047 3 9606 Homo sapiens 0.01999542147086686 REEGEAFAR Unmodified 1063.5047 0.50467125 4277 Q8WUD1;A0A3B3ITL1;Q5HYI5;B4DUD4;Q8WUD1-2;Q96K32 RAB2B;DKFZp313C1541 Ras-related protein Rab-2B yes no 0 0 1 1.5 0.5 1 1 29.827 29.896 3 0.00010345 5652 20230619_1881_Aki_TMTPro18x_K_F2 140.16 99.813 41789 30885 37062 46103 43560 45137 43500 38561 48611 39384 56751 58744 49656 51877 60103 50228 63276 63181 38582 28407 38189 45260 44722 45560 44018 39917 49497 40376 57571 58532 51467 53611 61052 51263 60511 59873 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137580000 22495 4277 21082 42325;42326 34050;34051 34051 2 9606 Homo sapiens -0.02454090227342931 REELAPYPK Unmodified 1101.5819 0.58185893 1105 A0A0S2Z4V5;A0A0S2Z556;O60828-5;O60828-2;O60828;A0A5H1ZRR1;O60828-3 PQBP1 Polyglutamine-binding protein 1 yes no 0 0 1 5.5 0.5 1 1 40.17 40.261 3 0.00025422 9621 20230619_1886_Aki_TMTPro18x_K_F6 123.79 89.1 174820 135790 159110 181450 190970 208770 197440 188850 225900 222850 234270 243410 252580 208380 206370 259040 257840 246320 161480 124710 163560 179780 196060 208560 199550 195240 228910 224050 240790 244990 255000 218770 213790 258640 246120 234130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 267950000 22496 1105 21083 42327;42328 34052 34052 1 9606 Homo sapiens 0.035131279889810685 REELAQIR Unmodified 1013.5618 0.56179219 908 A0A090N8Q5;H3BM14;H3BM74;Q9Y5A7-2;Q9Y5A7;H7C5E1 NYREN18;NUB1 NEDD8 ultimate buster 1 yes no 0 0 1 4.5 0.5 1 1 34.329 34.398 3 0.00090371 7288 20230619_1883_Aki_TMTPro18x_K_F4 112.84 62.235 74680 52484 80308 86308 110020 114030 100390 104510 104520 83825 109650 107650 93093 88403 93963 89311 109930 95364 69037 48344 81592 84685 111580 112940 101920 106850 106360 86573 111530 107580 95651 91816 96382 90109 104930 90566 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58083000 22497 908 21084 42329;42330 34053;34054 34053 2 9606 Homo sapiens 0.05555377049040544 REELFIVSK Unmodified 1119.6288 0.62880913 435 A0A024R7A8;P15121;Q59EL5;E9PCX2;E9PEF9 AKR1B1 Aldose reductase yes no 0 0 1 7 0.816 1 1 1 49.246 49.324 3 0.00018024 13208 20230619_1888_Aki_TMTPro18x_K_F8 131.83 91.237 1437500 1140500 1240100 1401600 1241400 1321900 1384100 1269000 1402800 1645800 1614400 1593000 1767800 1482400 1679600 1928700 1833600 1895100 1327500 1046400 1277000 1392900 1293100 1342000 1388100 1310800 1438000 1641100 1653300 1616300 1795100 1556600 1719400 1928300 1753300 1800200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3848699999.9999995 22498 435 21085 42331;42332;42333 34055;34056 34056 2 9606 Homo sapiens 0.07377987540144204 REELITNWEQIR Unmodified 1585.8213 0.82125436 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 5 0.816 1 1 1 50.771 50.832 3 1.5938000000000001E-31 14074 20230619_1885_Aki_TMTPro18x_K_F5 270.45 195.4 440990 368510 411990 404080 394270 459840 443010 470710 493270 488900 483830 508330 511680 465360 514450 574360 530140 549970 407600 337700 420630 406130 412530 461060 445590 480470 499430 493680 498360 513790 521700 487030 524290 573910 507220 522550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 767650000 22499 1022;3868 21086 42334;42335;42336 34057;34058 34057 2 9606 Homo sapiens 0.05177658149546005 REELLDHLEK Unmodified 1280.6725 0.67246486 3518 P28289 TMOD1 Tropomodulin-1 yes yes 0 0 1 4 0 1 43.958 44.002 4 0.00056303 11280 20230619_1883_Aki_TMTPro18x_K_F4 107.09 54.511 112670 86319 88890 108970 85082 97428 117860 117770 136460 129320 115180 127380 154480 122980 91086 185440 150220 142730 103960 79234 92360 108040 89655 99852 117470 119220 137160 130020 120900 129340 153430 130280 97522 182660 143100 136050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295790000 22500 3518 21087 42337 34059 34059 1 9606 Homo sapiens 0.04335552246629959 REELSNVLAAMR Unmodified 1387.7242 0.72418285 4731 Q9Y3U8 RPL36 60S ribosomal protein L36 yes yes 0 0 1 1 0 1 52.593 52.593 3 0.0009449 15446 20230619_1880_Aki_TMTPro18x_K_F1 90.412 74.471 17567 14958 16005 16458 17244 23859 18857 20482 31065 17537 14919 16974 15188 15655 18757 21625 21892 19527 16236 13707 16417 16597 17924 23475 19284 21067 30274 17898 16098 17218 15697 16493 19199 21509 20899 18578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43887000 22501 4731 21088 42338 34060 34060 1 9606 Homo sapiens 0.04582972668890761 REESEAVEAGDPPEELR Unmodified 1911.881 0.88101366 2582 B4DST5;Q9H3S7;B4DJ21 PTPN23 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type 23 yes no 0 0 1 1 0 1 39.384 39.384 3 3.5761E-06 9823 20230619_1880_Aki_TMTPro18x_K_F1 103.87 93.078 17956 13051 16047 18893 23237 28204 20830 23761 21266 20773 28097 29401 19511 23089 23966 20681 26466 26160 16577 12000 16589 18707 23525 27694 21166 24489 21898 21413 28146 29233 20440 23868 24412 21143 25296 24790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37050000 22502 2582 21089 42339 34061 34061 1 9606 Homo sapiens -0.03845160488435795 REEVVEEGAK Unmodified 1144.5724 0.57241646 2915 E9PGC8;P78559;P78559-2;A8K4T7;Q7Z5F9;Q504X9;Q9UL09 MAP1A;M1LP Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 1 2 0 1 34.854 34.911 3 3.2383E-05 7633 20230619_1881_Aki_TMTPro18x_K_F2 126.12 81.353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22503 2915 21090 42340 34062 34062 1 9606 Homo sapiens 0.005913149127991346 REFIQEPAK Unmodified 1116.5928 0.59275797 3222 O14744;O14744-2;B2RDD7;O14744-5;O14744-3;O14744-4;G3V580;G3V5L5;G3V2L6;C9JSX3 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed;Protein arginine N-methyltransferase 5 yes no 0 0 1 6.5 0.5 1 1 40.589 40.669 3 0.0015559 9788 20230619_1886_Aki_TMTPro18x_K_F6 94.66 68.923 259920 139040 160120 237870 161090 184330 196620 232870 323400 175210 161020 165850 180120 166460 131850 316790 294890 171650 239060 128320 171430 231200 168780 191400 200010 233000 315340 180150 173610 169240 181370 179330 144900 307230 279720 165020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132080000 22504 3222 21091 42341;42342 34063 34063 1 9606 Homo sapiens 0.03912530363277256 REFPTVPLVK Unmodified 1184.6917 0.69174374 1248 Q16851-2;A0A140VKE1;A0A7I2YQ74;Q16851;E7EUC7;B4DUP2;A0A087WYS1;Q53QE9;D6W5E6 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes no 0 0 1 3 0 1 50.717 50.787 3 0.024521 14470 20230619_1882_Aki_TMTPro18x_K_F3 61.435 13.876 216430 156730 168180 203310 191270 252790 199040 233670 305530 259370 234910 279820 293570 275680 211170 368870 318520 361310 199610 143940 175460 202070 197720 251280 203530 240590 302420 261540 247090 283060 294200 289300 223000 368250 304020 343090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 327800000 22505 1248 21092 42343 34064 34064 1 9606 Homo sapiens 0.10678553328148155 REGGDFVCCALSPR Unmodified 1622.7293 0.72934458 1896 A0MNN4;Q2TAY7;Q2TAY7-2 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes no 0 0 1 7.5 0.5 1 1 43.969 44.019 3 6.2159E-07 10934 20230619_1887_Aki_TMTPro18x_K_F7 134.85 109.26 64220 44836 57235 66178 62070 69699 64477 65932 82480 75080 76648 76885 73257 61288 75662 89352 86109 85004 59274 41244 58848 65090 64211 70102 65432 67865 82762 75455 78777 77469 75001 65216 77549 89050 82280 80787 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69504000 22506 1896 21093 42344;42345 34065 34065 1 9606 Homo sapiens -0.05711091530815793 REGGDGEEQDVGDAGR Unmodified 1645.6928 0.69281896 4224 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 1 1 0 1 28.317 28.317 3 3.2527999999999996E-19 5342 20230619_1880_Aki_TMTPro18x_K_F1 201.4 161.34 7926.5 4399.8 10198 10260 12863 14181 14494 12948 14754 9021.9 13910 17121 11418 9252.5 17221 5570 15897 15701 7332.1 4079.9 10215 9919.4 13183 14000 14520 13215 14952 9578 14238 16723 12004 9620.6 17270 6260.6 15221 14806 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21822000 22507 4224 21094 42346 34066 34066 1 9606 Homo sapiens -0.10419973622197176 REGIDPTPYYWYTDQR Unmodified 2058.9436 0.94355434 3265 O43776;B4DN60 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 1 6 0 1 52.41 52.487 3 3.3993E-11 14944 20230619_1886_Aki_TMTPro18x_K_F6 158.74 149.48 45609 29603 43185 43781 29950 41552 38657 41767 40984 55617 52089 59669 56636 48859 49637 76436 65980 85156 42100 27241 43879 43012 32463 42158 38591 43026 42132 55552 53170 60034 57349 52227 51657 76754 63104 80719 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81780000 22508 3265 21095 42347 34067 34067 1 9606 Homo sapiens -0.0435596962956879 REGPIGGESDSEEVR Unmodified 1615.7438 0.7437919 2924 E9PJP2;Q5TF21;A0A994J4H7;A5PLQ8;A1L177;H3BRB8 SOGA3;C6orf174 Protein SOGA3 yes no 0 0 1 1 0 1 32.865 32.865 3 2.1687E-10 7124 20230619_1880_Aki_TMTPro18x_K_F1 147.7 127.57 15689 8940.1 10857 16461 12364 13490 12782 12341 18095 17471 23984 37782 26524 34484 16639 40794 44225 54319 14443 8256.3 11486 15944 12756 13831 13030 12848 18360 18008 24519 37310 26637 35963 18753 41566 42117 51412 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45614000 22509 2924 21096 42348 34068 34068 1 9606 Homo sapiens -0.039450245773423376 REGTGTEMPMIGDR 2 Oxidation (M) 1580.6923 0.69229037 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 2 1 2.5 0.5 1 1 31.097 31.172 3 0.011977 6074 20230619_1881_Aki_TMTPro18x_K_F2 58.268 40.351 26265 16413 20438 23334 25951 30070 25311 28616 40563 23162 28826 29961 29710 27150 19701 39094 36775 39162 24206 15099 21348 23074 26559 29847 26020 29177 39927 23946 30153 30051 29859 28716 21261 39032 35038 37186 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 37353000 22510 3789 21097 42349;42350 34069;34070;34071 34069 2471;2472 3 9606 Homo sapiens -0.07482807867245356 REGTGTEMPMIGDR Unmodified 1548.7025 0.70246113 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 1 3.5 0.5 1 1 40.175 40.224 3 1.803E-08 9661 20230619_1883_Aki_TMTPro18x_K_F4 145.86 128.64 43184 31426 37838 44782 35223 56471 38931 43199 66067 46673 44926 51680 58366 55046 37747 65811 74545 76688 39862 28891 38902 44245 37104 55850 39873 45134 64882 47210 47687 52366 58257 57235 40930 66474 70983 72715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98929000 22511 3789 21097 42351;42352 34072 34072 1 9606 Homo sapiens -0.04994200142027694 REHALTSGTIK Unmodified 1211.6622 0.66223452 479 E5RHG8;A0A024R7Y5;Q15369;Q15369-2;R4GMY8;A0A8I5KYG1;A0A8J9AD82 TCEB1 Transcription elongation factor B polypeptide 1 yes no 0 0 1 5.33 3.09 1 1 1 33.081 33.11 4 0.00024378 7203 20230619_1880_Aki_TMTPro18x_K_F1 113.22 78.4 193010 107790 178790 211440 216620 234850 195640 212730 205800 142800 158630 148250 137500 112790 125260 161450 187450 149920 178010 99649 183550 205080 221440 235000 198850 216980 207030 148310 163980 149200 140500 120090 131210 160700 178490 142660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117210000 22512 479 21098 42353;42354;42355 34073;34074 34073 2 9606 Homo sapiens 0.06486989312043079 REHGVYASSK Unmodified 1132.5625 0.56252048 2091 B4DET0;A8K6G9;Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes no 0 0 1 8 0 1 27.903 27.933 4 0.053493 4935 20230619_1888_Aki_TMTPro18x_K_F8 44.765 21.886 7621.4 3493.5 8779.4 8300.1 10615 11243 11461 8997.5 10326 7182.7 7913.3 8481.9 7114.5 8423.1 9608.5 4739.4 12297 7086 7036.8 3244.5 8848.4 8016.1 10890 11085 11464 9305.6 10477 7405.2 8209.6 8540.8 7426.4 8487.8 9844.7 4972.3 11703 6724.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 750040 22513 2091 21099 42356 34075 34075 1 9606 Homo sapiens 0.001541716980682395 REHINLGCDMDFDIAGPSIR Unmodified 2315.0787 0.078684387 1286 A0A1L1UHR1;P21796;B3KTS5;C9JI87 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 1 6 0 1 53.291 53.369 3 9.7038E-19 15343 20230619_1886_Aki_TMTPro18x_K_F6 162.83 154.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22514 1286 21100 42357 34076 34076 1 9606 Homo sapiens -0.026251808218148653 REHSLIK Unmodified 881.5083 0.50830006 1479 A8K7T4;A0A384NPY7;Q12907;A0A8Q3WK65;D6RBV2;D6RDX1;D6RBH1 LMAN2 Vesicular integral-membrane protein VIP36 yes no 0 0 1 8 0 1 31.002 31.013 3 0.0022935 5996 20230619_1888_Aki_TMTPro18x_K_F8 122.19 55.93 59913 26458 44873 52221 61956 65853 58957 66169 94751 31919 42282 28694 25609 21425 45066 21654 37331 22511 55126 24499 47133 50750 63013 65508 60678 66630 92166 34112 45047 29091 27608 22359 44921 21886 35690 21426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16381000 22515 1479 21101 42358 34077 34077 1 9606 Homo sapiens 0.06280624337182417 REIGDYIR Unmodified 1020.5352 0.53524309 1807 O60832;A0A8Q3WLC8;A0A8Q3SIY6;A0A8Q3SIS9;A0A8Q3SJE8;A0A8Q3WLD1;A0A8Q3WLG7;A0A8Q3SIX2;C9IYT0;O60832-2;A0A8Q3WLE4;U5UA77;A0A8Q3WLW8;H7C2Q2;U5U7S7 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 0 0 1 6 0 1 39.499 39.587 3 0.046818 9375 20230619_1886_Aki_TMTPro18x_K_F6 57.859 27.289 60047 38549 43062 52305 51379 51339 48862 53202 80644 58414 65077 78922 72989 68822 51453 90734 96709 105610 55319 35439 45324 51664 52711 52038 50386 54369 79671 59431 67900 78859 73332 72462 55417 91522 92154 100120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61071000 22516 1807 21102 42359 34078 34078 1 9606 Homo sapiens 0.0257968815770937 REKPEEFQTR Unmodified 1318.663 0.6629628 3506 P26232-2;P26232-5;P26232;P26232-3;Q49AD3;F6KRI5;A0A0A0MRI5;P26232-4;P26232-6;B7Z259;A0A0A0MTJ6 CTNNA2 Catenin alpha-2 yes no 0 0 2 5.5 0.5 1 1 32.604 32.663 4 0.0032152 6629 20230619_1885_Aki_TMTPro18x_K_F5 86.911 71.938 37463 24593 25793 34686 36665 35564 30646 36547 49508 43139 43126 50755 57337 52392 27060 74993 72892 62586 34509 22617 27378 34192 37094 35924 31833 37433 49127 43503 45169 51278 56716 55141 30839 74151 69229 59614 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48412000 22517 3506 21103 42360;42361 34079 34079 1 9606 Homo sapiens 0.016377839610640876 RELELLGR Unmodified 984.57163 0.5716286 2433 B3KWQ6;P41219;P41219-2;F8W835 PRPH Peripherin yes no 0 0 1 6.5 0.5 1 1 43.234 43.32 3 0.00046328 10624 20230619_1887_Aki_TMTPro18x_K_F7 133.57 75.975 193730 148230 164920 180930 145430 153260 166810 159070 192880 213590 248250 261060 253190 231460 260610 244880 273120 302660 178850 136020 169700 179700 153220 157280 167840 163680 197260 214360 252460 261810 258690 240430 265480 249160 261400 286750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 219470000 22518 2433 21104 42362;42363 34080;34081 34081 2 9606 Homo sapiens 0.07872565054447023 RELELLK Unmodified 899.54402 0.54401687 3175 K7ESK0;K7ERX6;Q9UPT9-2;Q9UPT9 USP22 Ubiquitin carboxyl-terminal hydrolase 22 yes no 0 0 1 7 0 1 44.597 44.68 3 0.045163 11236 20230619_1887_Aki_TMTPro18x_K_F7 65.252 0 87243 76072 91974 101390 101090 112090 103200 96267 125640 112850 130130 112560 116850 101080 108490 124100 131250 130620 80740 69834 93233 100410 104360 112160 104620 99916 126840 113210 132590 113980 119310 105870 111810 124650 125350 124000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153470000 22519 3175 21105 42364 34082 34082 1 9606 Homo sapiens 0.09022661794199394 RELGCSSVR Unmodified 1062.524 0.52402648 1238 I3L407;I3L3W5;I3L139;Q6FIG5;B4DE94;B2RD19;A0A140VK84;Q9HA64 FN3KRP Ketosamine-3-kinase yes no 0 0 1 6.33 0.471 2 1 24.991 25.048 3 0.00047389 5283 20230619_1886_Aki_TMTPro18x_K_F6 104.22 62.792 48415 47900 45721 44741 59547 61061 56893 57749 74462 31544 34946 31030 29946 31457 44254 23674 37997 31673 44806 43811 46868 45700 60684 60466 58025 58509 73145 33358 37499 31556 31457 32012 44285 24437 36372 30021 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47395000 22520 1238 21106 42365;42366;42367 34083;34084 34083 2 9606 Homo sapiens -0.004734572080906219 RELHGQNPVVTPCNK Unmodified 1747.8788 0.87878601 3000 F8WJN3;Q16630-3;Q16630;Q16630-2;A0A2P1M905;A0A2P1M8Z1 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes no 0 0 1 4.5 3.5 1 1 35.305 35.299 4 1.97E-07 8104 20230619_1880_Aki_TMTPro18x_K_F1 123.76 105.16 90416 70332 92293 97329 90161 107020 114620 122150 104640 103880 111680 111050 125140 92639 93372 134820 119810 113430 83594 64619 93624 96203 94472 107780 113880 123220 107460 106130 114820 111890 125710 98419 97193 133480 114330 107980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 291560000 22521 3000 21107 42368;42369 34085;34086 34085 2 9606 Homo sapiens 0.03476177083416587 RELLELASR Unmodified 1085.6193 0.61930707 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;Q6ZS03;Q96CF6 HDLBP Vigilin yes no 0 0 1 1 0 1 46.595 46.595 3 0.01826 12982 20230619_1880_Aki_TMTPro18x_K_F1 66.19 32.812 14527 13108 13153 15867 11342 15128 13825 16560 22160 18827 20061 22499 23181 22732 15556 30601 26484 28795 13431 12020 13468 15788 12031 15381 14059 16876 22010 19028 20821 22699 23233 23837 16640 30475 25250 27360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30556000 22522 292 21108 42370 34087 34087 1 9606 Homo sapiens 0.07992219254606425 RELQPSEEVTWK Unmodified 1500.7573 0.75725712 394 A0A024R6G6;Q3MHU6;O75438;O75438-2 NDUFB1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 yes no 0 0 1 4.5 0.5 1 1 46.268 46.328 3 8.4963E-10 12181 20230619_1885_Aki_TMTPro18x_K_F5 179.5 116.7 119610 97567 114850 130920 128060 199840 150900 166660 194330 119930 129860 147980 154490 139300 118640 131120 152910 165840 110560 89595 117460 130300 133130 195860 152130 171220 192700 124740 137430 148630 155300 143550 123220 133810 146060 157100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199810000 22523 394 21109 42371;42372 34088 34088 1 9606 Homo sapiens 0.026908779925406634 RELQQAVLHMEQR Unmodified 1636.8468 0.8467576 2110 Q53GX6;A8K7Q1;Q02818;B4DZX0;Q96BA4;B3KUR6 NUCB1 Nucleobindin-1 yes no 0 0 1 8 0 1 44.514 44.532 4 4.3401E-06 11319 20230619_1888_Aki_TMTPro18x_K_F8 133.48 108.09 25786 20737 18457 21996 18977 27927 22271 25926 35147 25254 28518 26788 29567 26774 20470 39058 38089 35243 23785 19000 19397 22192 19860 27731 22662 26591 34773 25632 29586 27168 29748 28254 22050 38778 36254 33525 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39911000 22524 2110 21110 42373 34089 34089 1 9606 Homo sapiens 0.05380809400276121 REMDQTMAANAQK Oxidation (M) 1508.6712 0.671161 1828 A0A8V8TMN5;P30085;P30085-3;Q5T0D2;B4DFW6;B4DDL4 CMPK1 UMP-CMP kinase yes no 0 1 1 4.5 0.5 1 1 32.983 33.053 3 0.01934 6734 20230619_1883_Aki_TMTPro18x_K_F4 84.297 63.051 31544 21372 26068 33103 30924 40350 36017 43450 47157 38951 42551 43838 55216 39188 28062 51365 53032 46447 29094 19674 27065 32541 31954 40283 36367 44022 47209 39763 44395 44152 54634 41246 30516 51075 50454 44192 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34601000 22525 1828 21111 42374;42375 34090;34091 34090 1168 2 9606 Homo sapiens -0.06282773176098999 REMDQTMAANAQK Unmodified 1492.6762 0.67624638 1828 A0A8V8TMN5;P30085;P30085-3;Q5T0D2;B4DFW6;B4DDL4 CMPK1 UMP-CMP kinase yes no 0 0 1 5.5 0.5 1 1 37.631 37.716 3 8.0187E-11 8620 20230619_1886_Aki_TMTPro18x_K_F6 139.19 98.615 83680 54100 73415 78701 83435 105640 81292 95325 125650 106720 120650 121450 133520 99486 78554 127830 146590 121630 77196 49774 75626 77776 86038 104470 83487 98336 125240 107730 124490 121910 133220 104890 84859 127500 139430 115680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88544000 22526 1828 21111 42376;42377 34092;34093 34093 2 9606 Homo sapiens -0.05038469313467431 RENDMSPSNNVVPIHVPPTTENKPK Oxidation (M) 2815.3923 0.39229061 369 H3BSC1;A0A024R5Z8;P62491;B4DQU5 RAB11A Ras-related protein Rab-11A yes no 0 1 2 8 0 1 41.834 41.831 5 0.0011131 10249 20230619_1888_Aki_TMTPro18x_K_F8 69.981 64.551 9140 7194.5 8279.4 9633.5 6624.4 6608.6 7934.2 7476.7 8707.8 12627 8324.9 10934 10114 10009 8931.6 14707 8905.2 10124 8442.9 6607.4 8463.3 9487.6 7043.7 6935.8 7951 7721.3 8838.9 12427 8656.4 11136 10220 10590 9135 14431 8529.1 9659.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11844000 22527 369 21112 42378 34094 34094 219 1 9606 Homo sapiens 0.05721015701965371 RENPHDAVVFHPK Unmodified 1544.7848 0.78480927 1501 A0A8I5KXV4;F5H345;A0A3B3IRR1;A0A3F2YNY7;P08397-4;P08397-3;P08397-2;P08397;A0A3B3IU56;F5GY90;A0A1W2PNU5;A0A3B3IU34;F5H0P4 HMBS Porphobilinogen deaminase yes no 0 0 1 6 0.816 1 1 1 34.392 34.462 5 4.2851E-05 7054 20230619_1887_Aki_TMTPro18x_K_F7 111.83 93.693 100980 59879 74879 116670 147810 111660 197170 202540 143160 113580 137970 165750 136240 137600 121960 127870 166710 189950 93014 55335 79619 113040 148530 115360 194110 198210 148550 121000 141970 164910 138620 142310 126770 132110 159240 179670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186490000 22528 1501 21113 42379;42380;42381 34095 34095 1 9606 Homo sapiens 0.0342082604342977 RENPLDSSVEFMQIWR Unmodified 2005.968 0.96799495 3326 O76038;A0A994J4C2 SCGN Secretagogin yes no 0 0 1 8 0 1 62.113 62.142 3 7.5669E-06 18725 20230619_1888_Aki_TMTPro18x_K_F8 109.42 98.365 24630 19077 23862 21332 23150 26705 21579 22038 33438 40163 36983 41710 41909 41547 43093 49296 39726 56100 22761 17490 24274 21438 24096 26497 22229 23313 33582 39672 38032 42253 42707 43259 43655 49772 38156 53152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145350000 22529 3326 21114 42382 34096 34096 1 9606 Homo sapiens 0.0052496725227229035 RENPLLPEEEEQR Unmodified 1637.8009 0.80091285 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;H0YCH5;H0YEC5;H0YD77 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 1 1 0 1 39.147 39.147 3 4.4772E-09 9740 20230619_1880_Aki_TMTPro18x_K_F1 169.04 157.51 18082 13062 15501 17407 19701 25752 21305 21394 27709 24649 25867 34796 29609 29821 24391 39812 38673 42385 16688 11999 16044 17323 20222 25291 21578 22241 27789 25057 26845 34689 29906 31427 25769 39939 36890 40216 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92549000 22530 3752 21115 42383 34097 34097 1 9606 Homo sapiens 0.007524426990357824 REPAEQPGDGER Unmodified 1339.6117 0.61165551 2020;3876 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;Q14151;A0PJ47 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 1 1 0 1 23.166 23.166 3 1.4884E-13 3806 20230619_1880_Aki_TMTPro18x_K_F1 192.65 141.39 101230 43784 134510 151640 175600 252340 150970 191350 206050 138080 196530 272820 203400 194680 186020 92780 225350 243380 93588 41034 134670 145270 178970 245680 155440 198160 206150 146610 202880 267720 206710 198040 191090 103640 215360 229500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 354660000 22531 2020;3876 21116 42384 34098 34098 1 9606 Homo sapiens -0.04456584803642727 REPFFHGQDNYDQLVR Unmodified 2019.9551 0.95512208 3067 P19784;H3BNI9;H3BSA1 CSNK2A2 Casein kinase II subunit alpha' yes no 0 0 1 6 0 1 45.308 45.394 3 9.0802E-05 11841 20230619_1886_Aki_TMTPro18x_K_F6 97.129 88.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22532 3067 21117 42385 34099 34099 1 9606 Homo sapiens -0.014057278155632957 REPHPAEAEK Unmodified 1162.5731 0.57308516 923 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;Q9P2K5-4 MYEF2 Myelin expression factor 2 yes no 0 0 1 2.5 0.5 1 1 23.126 23.238 4 0.0014354 3816 20230619_1882_Aki_TMTPro18x_K_F3 93.345 51.009 205950 118290 223200 223040 264930 257070 221500 264550 255710 198410 272310 306620 256620 271960 296480 134930 336180 250860 190210 109270 225850 216950 270440 257430 227120 267900 259000 207410 278270 304850 264680 274280 302000 144910 320680 237350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 259870000 22533 923 21118 42386;42387 34100 34100 1 9606 Homo sapiens -0.0016984564751965081 REPLPSRPLNAR Unmodified 1404.795 0.79498003 2950 F1T0J8;Q8IZ40 RCOR2 REST corepressor 2 yes no 0 0 2 3.5 0.5 1 1 31.244 31.319 4 4.651E-05 6048 20230619_1883_Aki_TMTPro18x_K_F4 120.84 77.03 100940 75071 117890 120780 169270 136320 129780 189850 133480 119310 153790 178600 138900 138440 164900 137960 177090 160500 93412 69112 119070 118440 170230 137930 133450 188160 136550 126030 156420 177230 143610 143990 167730 140020 169200 152270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49574000 22534 2950 21119 42388;42389 34101;34102 34102 2 9606 Homo sapiens 0.10877433768700939 REPLSLINVR Unmodified 1195.7037 0.70370541 1871 A0A994J4Y8;Q96HS1-2;Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 0 0 1 3.5 0.5 1 1 46.064 46.124 3 0.0014326 12385 20230619_1882_Aki_TMTPro18x_K_F3 91.752 68.516 135930 122010 142300 146920 130200 173040 160580 161900 178450 167990 156460 154040 165480 137020 172230 165770 165960 158260 125810 111870 143920 146690 137230 172660 160720 166300 179920 169040 161990 156440 168900 143440 174630 165740 158790 150430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132050000 22535 1871 21120 42390;42391 34103 34103 1 9606 Homo sapiens 0.11368170071364148 REPPPYGYR Unmodified 1133.5618 0.56179219 3859 Q6I9S2;Q13573;G3V3A4;B4DEG7;Q6P151;Q0D2M5;G3V5R3 SNW1 SNW domain-containing protein 1 yes no 0 0 1 7 0.816 1 1 1 32.171 32.216 3 0.00012426 6158 20230619_1887_Aki_TMTPro18x_K_F7 119.62 86.776 96606 53745 87219 90590 109790 107530 117890 105150 131580 106920 115810 112040 111430 90667 102000 111250 123560 113690 89078 49578 89739 88633 112390 107370 118750 107660 132560 108160 119340 112800 113420 95341 105120 111580 117950 107990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72776000 22536 3859 21121 42392;42393;42394 34104;34105 34104 2 9606 Homo sapiens 0.0003537704901646066 REPQGFHK Unmodified 997.50936 0.50936269 3435 Q59EZ3;P11717;A0A7I2V381 IGF2R Cation-independent mannose-6-phosphate receptor yes no 0 0 1 7.5 0.5 1 1 31.527 31.578 4 0.042756 6169 20230619_1888_Aki_TMTPro18x_K_F8 62.558 36.821 60193 39059 57491 74614 99845 96290 85699 87834 105990 68606 85309 84584 79541 70714 69393 57430 87214 66222 55566 36068 59360 72618 99900 95493 87806 89792 105880 70924 88227 84650 80922 72683 71646 58482 83128 62882 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53237000 22537 3435 21122 42395;42396 34106 34106 1 9606 Homo sapiens 0.010508387061008762 REQEELER Unmodified 1087.5258 0.52580062 865 B7Z3Y3;B7Z3E1;B2R704;B7ZB64;A0A087WZ40;Q14244-5;Q14244-3;Q14244-2;Q14244-6;Q14244-4;Q14244;Q14244-7 MAP7 Ensconsin yes no 0 0 1 1 0 1 27.678 27.678 3 0.00089201 5079 20230619_1880_Aki_TMTPro18x_K_F1 122.33 25.661 7003.3 2658.6 10115 8199 5834.1 7877.5 9610.4 11448 14694 7803.2 18181 21084 13196 16326 18950 7068.2 21554 21792 6477.9 2486.5 9943.1 7818.8 6511.4 8054.6 9638.9 11352 14765 8492.2 18299 20620 13936 16497 19245 8115.9 20600 20541 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7595400 22538 865 21123 42397 34107 34107 1 9606 Homo sapiens -0.014461249184705594 REQEVAELK Unmodified 1100.5826 0.58258722 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 1 3.5 0.5 1 1 38.468 38.516 3 0.0031298 9004 20230619_1882_Aki_TMTPro18x_K_F3 85.958 19.363 79464 50547 72395 100240 91782 97834 89764 96889 101360 86305 125530 121410 95498 93275 96100 108630 126810 128260 73322 46708 74586 96985 93744 99011 91014 98795 103430 88857 126310 120770 98552 97899 99478 109980 121040 121610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111160000 22539 3549 21124 42398;42399 34108 34108 1 9606 Homo sapiens 0.03631922638032847 REQGGSGLGSGSSGGGGSTSGLGSGYIGR Unmodified 2541.1804 0.18038358 915 A0A096LP25;Q9BUD9;E9PG46;D6W5G0;B7ZLC4;Q2M2I8-2;Q2M2I8 AAK1 AP2-associated protein kinase 1 yes no 0 0 1 8 0 1 39.913 39.902 3 3.284E-09 9431 20230619_1888_Aki_TMTPro18x_K_F8 103.16 95.715 3914.3 2896.5 5402.5 4628.6 3259.7 5851.6 5567.2 5636.5 7074.4 6277.1 6732.7 5620.6 6863.8 5351.5 5623.2 6720.7 7280.1 6499.4 3628.6 2666.4 5331.2 4547.8 3632.9 5810.4 5527.8 5787.9 7102.8 6292.1 6920.1 5732 6940.4 5604.5 5837 6716.1 6944.1 6178.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7644900 22540 915 21125 42400 34109 34109 1 9606 Homo sapiens -0.028559396646869573 REQGNIEEAVR Unmodified 1299.6531 0.6531264 1842 A0A8V8TQ64;A0A8V8TPA3;A0A8V8TP17;A0A8V8TQ37;O15294-3;O15294;Q548W1;O15294-2 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 0 0 1 2 0 1 32.093 32.154 3 2.3726E-06 6555 20230619_1881_Aki_TMTPro18x_K_F2 134.01 89.824 82864 59572 73110 88282 94342 109810 82713 91947 123610 105480 120440 147310 136240 130020 86513 149360 187810 185060 76489 54795 75489 87008 96155 108950 85349 95520 123460 107220 124500 147030 136410 135670 94776 151570 178700 175410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148230000 22541 1842 21126 42401 34110 34110 1 9606 Homo sapiens 0.01528595955687706 REQQPALR Unmodified 996.54648 0.54647648 4662 Q9UHL4;R4GMR2 DPP7 Dipeptidyl peptidase 2 yes no 0 0 1 6 0 1 26.618 26.653 3 0.031662 4635 20230619_1886_Aki_TMTPro18x_K_F6 64.42 26.871 6322.3 3408.6 8416.5 7981.3 8433.6 6133.8 5901.9 8920.9 6286.9 9409.5 14279 15111 12773 10776 12779 3985.4 15253 14985 5849.6 3161.6 8366.1 7657.1 8660.3 6407.3 6131.5 8930.2 6707.1 9641.3 14214 14912 13079 10914 13080 4759.2 14568 14117 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2208400 22542 4662 21127 42402 34111 34111 1 9606 Homo sapiens 0.04806510251853524 RESGEEFR Unmodified 1008.4625 0.46247208 2239 B2R6S9;P30533;A8K8F6;A0A3B3IRQ7;D6REW6 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes no 0 0 1 1.5 0.5 1 1 27.333 27.372 3 0.0021579 5067 20230619_1880_Aki_TMTPro18x_K_F1 98.582 66.361 48864 29399 52879 48434 65724 70175 59376 60312 76354 55372 76500 85623 67308 64860 70742 55552 93487 91691 45139 27100 53546 47611 67078 69056 60766 62159 76732 57184 78147 84793 69228 67097 73039 58047 89215 86712 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 83701000 22543 2239 21128 42403;42404 34112;34113;34114 34112 3 9606 Homo sapiens -0.041420656357104235 RESQSVEEALK Unmodified 1274.6466 0.64664404 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 1 4 0 1 40.115 40.158 3 0.033312 9640 20230619_1883_Aki_TMTPro18x_K_F4 52.863 21.156 52195 34657 48402 57915 54022 65262 51479 54989 72073 69568 76641 83319 77673 68488 50739 92422 92983 98050 48178 31938 49627 56616 55694 65154 52707 57279 72440 69960 78456 83469 78024 72390 54634 92667 88592 93050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87837000 22544 1182 21129 42405 34115 34115 1 9606 Homo sapiens 0.020306580043552458 RESQSVEEALKK Unmodified 1402.7416 0.74160705 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 2 6.5 0.5 1 1 41.005 41.086 4 3.1485E-05 9994 20230619_1886_Aki_TMTPro18x_K_F6 126.56 92.385 125040 69795 82759 98326 94207 116670 93424 103130 144140 154010 153930 168450 158970 151390 83102 200440 198260 179040 115070 64238 87852 97143 97248 116220 95832 107610 144440 153380 157630 169780 158720 159190 92839 199070 188450 170350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238940000 22545 1182 21130 42406;42407 34116 34116 1 9606 Homo sapiens 0.05634591475518391 RESVASGDDRAEEDMDEAIEK Unmodified 2351.0183 0.018311779 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 2 1 0 1 44.449 44.449 4 2.6234E-38 12024 20230619_1880_Aki_TMTPro18x_K_F1 242.53 219.63 115260 80686 105180 122660 86207 135310 99181 113750 140460 136730 162260 255240 198900 223710 151090 258160 280750 360270 106410 74247 107540 120500 91821 135210 100620 118370 141620 140600 167630 252520 200110 233440 162250 264200 267920 340810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357260000 22546 630 21131 42408 34117 34117 1 9606 Homo sapiens -0.10315664461813867 RESVELALK Unmodified 1043.5975 0.597509 2579 B4DRS4;O43719;Q5H919;Q5H918 HTATSF1 HIV Tat-specific factor 1 yes no 0 0 1 6.5 0.5 1 1 44.515 44.601 3 0.05269 11149 20230619_1887_Aki_TMTPro18x_K_F7 48.981 13.037 253970 186410 213070 223380 268630 272990 264760 284180 318770 284020 291250 285490 302070 267120 227770 376000 356470 313980 234380 171050 220720 223260 274510 272610 268850 289400 320570 287140 300440 289400 304670 281760 240840 372170 339530 299030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207640000 22547 2579 21132 42409;42410 34118 34118 1 9606 Homo sapiens 0.07745414506030102 RESVLTATSILNNPIVK Unmodified 1854.0575 0.057461885 4029 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 ZNF326 DBIRD complex subunit ZNF326 yes no 0 0 1 4 0 1 58.341 58.343 4 0.011046 17642 20230619_1883_Aki_TMTPro18x_K_F4 64.507 46.412 70490 60509 66274 75556 59070 79165 78288 72719 84570 87986 87704 91755 104190 83635 87090 113020 100260 104220 65168 55513 67647 75101 62557 79597 78013 75172 85957 88223 90582 92733 104980 88102 89732 112530 95832 99064 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40866000 22548 4029 21133 42411 34119 34119 1 9606 Homo sapiens 0.16459545203338166 RETAATFLK Unmodified 1035.5713 0.57129425 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;I3L4U9;A0A0D9SFI9 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 1 2 0 1 42.885 42.966 3 0.025649 11213 20230619_1881_Aki_TMTPro18x_K_F2 53.124 25.503 210250 150840 191110 199290 227840 281550 226500 247050 337410 238140 222300 205850 234480 226450 227920 253690 298560 265400 194120 138570 196370 198310 234220 277530 231810 254370 332640 240480 233910 211260 238960 234310 235900 255090 284750 252070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95424000 22549 534 21134 42412 34120 34120 1 9606 Homo sapiens 0.05493145334548899 RETDFYLQSVER Unmodified 1541.7474 0.74742071 75 A0A024R029;Q9ULW3 ABT1 Activator of basal transcription 1 yes no 0 0 1 4 0 1 45.652 45.696 3 2.3068E-05 12002 20230619_1883_Aki_TMTPro18x_K_F4 124.33 99.009 38719 29178 35169 42550 36398 47171 39417 45352 55911 48008 58997 61039 62379 55270 50780 75335 63995 71073 35758 26828 36092 41909 37886 47272 40096 46519 56110 48793 60528 61234 63034 58235 52711 75065 61151 67525 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42834000 22550 75 21135 42413 34121 34121 1 9606 Homo sapiens -0.0017831001282502257 RETGVDLTK Unmodified 1017.5455 0.54547343 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;Q2F839 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 1 6 0.816 1 1 1 38.083 38.161 3 0.0018803 8745 20230619_1886_Aki_TMTPro18x_K_F6 92.866 49.096 216860 115420 163150 199950 181710 223870 199530 228650 355970 262420 307420 374200 377530 356060 206960 339780 503890 425750 199680 106540 170730 195130 188400 224470 204940 234110 351530 267070 320900 374010 375580 366920 230500 346140 478710 403750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2194300000 22551 1488 21136 42414;42415;42416 34122;34123;34124 34123 3 9606 Homo sapiens 0.03740251092267499 RETTGTGPNVYHENDTIAK Unmodified 2102.0029 0.0028601316 252 Q4G0F5;A0A024R3L9 VPS26B Vacuolar protein sorting-associated protein 26B yes no 0 0 1 4 0 1 37.058 37.102 4 5.2446E-10 8375 20230619_1883_Aki_TMTPro18x_K_F4 122.49 101.84 20115 11812 14376 21716 18702 18143 18826 21024 26330 23624 29921 36836 35893 32071 19271 43616 40923 55077 18523 10907 15186 21046 19096 18675 19209 21357 26532 24141 30810 36649 35687 33853 21223 44198 39043 52139 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36626000 22552 252 21137 42417 34125 34125 1 9606 Homo sapiens -0.004061184060446976 RETYYLSDSPLLGPPVGEPR Unmodified 2245.1379 0.13789705 2634 Q9NYZ3;B4DZT6;A0A024R4V8 GTSE1 G2 and S phase-expressed protein 1 yes no 0 0 1 7 0 1 55.679 55.74 3 1.2168E-09 16049 20230619_1887_Aki_TMTPro18x_K_F7 115.42 99.296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22553 2634 21138 42418 34126 34126 1 9606 Homo sapiens 0.0651336173573327 REVDDLGPEVGDIK Unmodified 1540.7733 0.77330111 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 1 3 0.816 1 1 1 48.847 48.907 3 9.6444E-09 13640 20230619_1882_Aki_TMTPro18x_K_F3 157.09 126.76 409720 236210 273590 383960 257160 409030 334450 346350 428910 549440 441560 392880 510530 455100 406660 567740 469600 601450 377110 217750 289810 375510 272010 409770 335670 363490 432860 539660 455020 408170 514100 473550 419770 570050 449620 570420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2912400000 22554 3246 21139 42419;42420;42421 34127 34127 1 9606 Homo sapiens 0.024545394387814667 REVFQTASER Unmodified 1221.6102 0.61019895 4399 Q96T76;Q96T76-8;Q96T76-9;H7C1W5 MMS19 MMS19 nucleotide excision repair protein homolog yes no 0 0 1 5.5 0.5 1 1 33.819 33.882 3 0.0024314 7138 20230619_1885_Aki_TMTPro18x_K_F5 84.687 66.462 41469 36687 47049 48350 54788 67079 55898 55132 60530 59551 68031 78424 77689 60812 57968 73586 84425 81507 38408 33673 47467 48099 56360 66107 56447 57265 61711 60522 69920 78140 78033 64006 60834 74137 80501 77343 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33850000 22555 4399 21140 42422;42423 34128;34129 34128 2 9606 Homo sapiens 0.008258258982777988 REYTTICR Unmodified 1097.5288 0.52877751 3310 O75569-3;O75569-2;O75569;A0A7I2YQ87;A0A7I2V5H3;B4DJC7;A0A7I2V2I8;A0A7I2V3J2 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes no 0 0 1 7.5 0.5 1 1 31.331 31.386 3 0.0064263 6107 20230619_1888_Aki_TMTPro18x_K_F8 89.355 72.684 45519 32647 37683 45791 42451 54076 48179 52893 77689 49168 59787 70380 68121 69769 44410 87231 103830 100780 41998 30010 39064 45251 44006 53988 49138 54011 76652 50611 62576 70513 68304 72866 49088 87990 98745 95592 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40714000 22556 3310 21141 42424;42425 34130;34131 34131 2 9606 Homo sapiens -0.016085730653230712 RFADEGTVVK Unmodified 1120.5877 0.58767259 4239 Q8N806;B2RDC9;E9PCJ7;Q05DA8;H0YJY4;H0YJM2 UBR7 Putative E3 ubiquitin-protein ligase UBR7 yes no 0 0 1 6.5 0.5 1 1 40.32 40.398 3 0.00065069 9774 20230619_1886_Aki_TMTPro18x_K_F6 98.754 61.033 117050 86518 118390 121010 123310 137610 124670 131490 163090 141720 144830 143920 182780 151660 132400 214510 221910 207330 108170 79516 120240 119570 127800 137710 126840 135000 163240 142830 151050 146450 183050 159530 140900 213870 211360 197050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 95451000 22557 4239 21142 42426;42427 34132 34132 1 9606 Homo sapiens 0.03220226500661738 RFASGGCDNLIK Unmodified 1336.6558 0.65576893 3660 P55735-2;P55735;P55735-4;P55735-3;A8MXL6;Q59FA6;Q53GB2 SEC13 Protein SEC13 homolog yes no 0 0 1 1.5 0.5 1 1 43.282 43.322 3 4.4674E-06 11345 20230619_1881_Aki_TMTPro18x_K_F2 142.12 88.589 263430 207300 228740 253450 297440 315140 268670 272500 284420 334730 320360 318780 365830 270910 275980 377910 336490 315190 243260 190200 236400 252940 302720 313060 273110 282930 290710 334380 328890 322790 367410 286790 286110 374240 321210 300110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 943560000 22558 3660 21143 42428;42429 34133 34133 1 9606 Homo sapiens 0.00090728089003278 RFCPEADSK Unmodified 1108.4971 0.49714303 4310 Q92896;Q92896-3;Q92896-2;Q6ZMF1 GLG1 Golgi apparatus protein 1 yes no 0 0 1 5.5 0.5 1 1 36.799 36.868 3 0.00033773 8279 20230619_1886_Aki_TMTPro18x_K_F6 119.6 70.302 64355 47518 70407 86437 134240 141290 117900 128180 174710 119360 110400 118590 135500 105380 90427 146710 161390 153300 59517 43822 72095 84708 133970 138330 121460 131500 172120 121210 117380 120030 135410 111390 96964 146940 153670 145570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83129000 22559 4310 21144 42430;42431 34134;34135 34135 2 9606 Homo sapiens -0.052765658192811316 RFCSVSCSR Unmodified 1157.507 0.50699621 3801 Q05BQ5;H7C228;A0A0S2Z5Q2;B3KPJ8;A0A0S2Z5X6;Q05BQ5-2;Q969R5-2;Q969R5-3;Q969R5 MBTD1;L3MBTL2 MBT domain-containing protein 1;Lethal(3)malignant brain tumor-like protein 2 yes no 0 0 1 4.5 0.5 1 1 30.154 30.226 3 0.00083075 5648 20230619_1883_Aki_TMTPro18x_K_F4 91.752 73.007 78182 52988 67858 73811 100390 112610 88818 100400 107680 58315 76066 68092 60054 59014 71630 54843 81392 62515 72136 48716 70322 73306 101460 110600 90793 102220 107190 61576 78798 68428 62432 60921 73071 55676 77650 59365 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 22663000 22560 3801 21145 42432;42433 34136 34136 1 9606 Homo sapiens -0.06545701085519795 RFDAERPVDCSVIVVNK Unmodified 2003.0258 0.02584418 4550 Q9HCD5;Q5JY17 NCOA5 Nuclear receptor coactivator 5 yes no 0 0 2 8 0 1 47.478 47.536 4 5.4558E-09 12493 20230619_1888_Aki_TMTPro18x_K_F8 129.32 99.185 148330 121020 140120 156860 167630 172790 168000 167480 168850 171680 162730 147360 167840 142030 157310 174540 170580 168530 137090 111090 143520 155650 171840 173410 169410 171560 171830 172540 167390 150600 170640 148430 160970 174500 163070 160140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120080000 22561 4550 21146 42434 34137 34137 1 9606 Homo sapiens 0.06445229177711553 RFDAMPFTLR Oxidation (M) 1268.6336 0.63357693 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2 PA2G4 Proliferation-associated protein 2G4 yes no 0 1 1 3.5 0.5 1 1 47.504 47.565 3 0.026912 12885 20230619_1883_Aki_TMTPro18x_K_F4 89.533 67.862 68632 75065 70625 74784 80391 92950 72456 83271 85927 55117 54082 54984 59015 48647 64228 60663 66337 57688 63611 68672 71747 75822 82564 92412 73958 84953 85443 57262 57235 55645 60334 51029 65311 60617 63390 54855 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141300000 22562 654 21147 42435;42436 34138 34138 395 1 9606 Homo sapiens 0.01000548411229829 RFDAMPFTLR Unmodified 1252.6387 0.63866231 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 1 4.5 0.5 1 1 53.064 53.135 3 5.3613E-06 15128 20230619_1885_Aki_TMTPro18x_K_F5 144.1 119.25 124000 149050 131230 126210 108570 144700 128930 146410 152180 63048 56448 51384 59143 40835 117280 67350 59505 51007 115050 136150 132360 129760 115310 145000 129570 147180 149610 67960 62644 52451 62971 43902 114770 66500 57434 48651 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139820000 22563 654 21147 42437;42438 34139;34140 34140 2 9606 Homo sapiens 0.022448522738613974 RFDAQTGADR Unmodified 1135.537 0.53703401 2016 A8K2M0;P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 1 5 0.816 1 1 1 30.105 30.163 3 0.0070549 5570 20230619_1883_Aki_TMTPro18x_K_F4 71.085 44.412 42684 33909 36783 37879 47398 54915 50232 48185 63846 50782 50331 52879 55520 51568 47762 45847 65299 53579 39416 31084 38032 38158 48524 54081 50874 49746 63707 51290 52514 53511 56186 52928 49652 46615 62227 50850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 309000000 22564 2016 21148 42439;42440;42441 34141;34142 34141 2 9606 Homo sapiens -0.025313028243544977 RFDAQTGADREVQR Unmodified 1647.8077 0.80772956 2016 A8K2M0;P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 2 4.5 0.5 1 1 31.075 31.146 4 4.4273E-16 6080 20230619_1885_Aki_TMTPro18x_K_F5 198.16 162.27 67940 63875 63088 63598 83678 64486 70715 75679 67539 70800 76398 61369 73350 51005 69104 87607 82416 59225 62844 58461 64762 64326 84710 65512 71990 76384 69384 71486 77740 62495 74691 54904 71175 85805 78566 56638 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 176950000 22565 2016 21149 42442;42443 34143;34144 34144 2 9606 Homo sapiens 0.009738003702295828 RFDDAVVQSDMK Oxidation (M) 1425.6558 0.65582851 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;E9PNE6;P11142-2;Q53HF2;E9PN89;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PPY6;E9PN25;A4D111;E9PK54 HSPA8;HEL-S-72p;LOC401308 Heat shock cognate 71 kDa protein no no 0 1 1 3.8 1.17 1 1 1 2 42.169 42.239 3 0.0011014 10429 20230619_1883_Aki_TMTPro18x_K_F4 116.19 90.206 3184500 2778100 2276400 3047300 3215800 3084800 2974400 3021000 3728100 3345800 3530100 3028500 3701600 2829800 3352200 4594000 3537900 3529300 2938800 2545400 2406000 3055800 3259400 3117500 3035600 3099500 3747300 3355400 3635100 3087500 3754000 3018900 3432200 4524600 3383200 3363400 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5576100000 22566 3430;2926 21150 42444;42445;42446;42447;42448 34145;34146;34147;34148;34149 34146 1740 5 9606 Homo sapiens -0.03997316701679665 RFDDAVVQSDMK Unmodified 1409.6609 0.66091389 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;E9PNE6;P11142-2;Q53HF2;E9PN89;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PPY6;E9PN25;A4D111;E9PK54 HSPA8;HEL-S-72p;LOC401308 Heat shock cognate 71 kDa protein no no 0 0 1 4.86 1.25 1 2 2 1 1 45.794 45.864 3;4 5.5414E-10 12057 20230619_1883_Aki_TMTPro18x_K_F4 184.65 144.37 1301200 1052200 1191500 1255500 1055400 1421500 1318700 1318300 1488600 1638800 1498300 1436900 1816800 1387100 1383200 1991800 1352000 1675000 1202200 965090 1218200 1253500 1116500 1422000 1319900 1362200 1508600 1632900 1550000 1467200 1822300 1464900 1416000 1972300 1296200 1593100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 10377000000 22567 3430;2926 21150 42449;42450;42451;42452;42453;42454;42455 34150;34151 34150 2 9606 Homo sapiens -0.027530128390480968 RFDDPGLMLMGFK Oxidation (M) 1541.7371 0.73705572 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 1 1 2 0 1 60.441 60.452 3 0.0013236 18797 20230619_1881_Aki_TMTPro18x_K_F2 82.705 56.557 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22568 150 21151 42456 34152 34152 83 1 9606 Homo sapiens -0.01214332263293727 RFDEATQLR Unmodified 1134.5782 0.57817054 3469 P17858;P17858-2;Q7L2M7;Q9BSP4 PFKL ATP-dependent 6-phosphofructokinase, liver type yes no 0 0 1 5.5 0.5 1 1 37.501 37.585 3 1.8093E-12 8566 20230619_1886_Aki_TMTPro18x_K_F6 210.27 151.29 75845 55366 72536 66986 73915 74488 71207 74693 93798 75713 97846 104050 94463 84638 95599 90981 105780 98185 70059 50810 73928 66824 76586 74783 72689 76323 94354 77353 100100 103680 96606 88246 97723 91758 101060 93208 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188150000 22569 3469 21152 42457;42458 34153 34153 1 9606 Homo sapiens 0.016264582151279683 RFDEILEASDGIMVAR Oxidation (M) 1836.904 0.90399771 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 1 1 4.5 1.12 1 1 1 1 57 57.043 3 2.2502E-10 16894 20230619_1886_Aki_TMTPro18x_K_F6 165.16 147.24 275330 206630 220130 301290 354710 304220 312210 278560 328790 282330 328250 325840 325360 284700 310830 376860 300790 378070 254030 189990 230630 296280 356070 306970 317600 286660 333920 286570 336710 327650 331490 299850 316180 377080 288430 358790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5630100000 22570 370;3451 21153 42459;42460;42461;42462 34154;34155;34156 34156 225 3 9606 Homo sapiens 0.019021870953338293 RFDEILEASDGIMVAR Unmodified 1820.9091 0.90908309 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 1 5 0.707 1 2 1 61.066 61.102 2;3 1.9338E-37 18346 20230619_1885_Aki_TMTPro18x_K_F5 245.85 191.07 1853200 1388600 1748700 1826300 1673000 1992200 1964500 1995400 2223200 2091400 2052300 2275400 2267200 2043100 2311800 2655000 2082100 2472300 1711900 1275300 1784700 1810500 1753100 2001400 1972100 2040900 2243600 2114300 2125200 2294100 2309800 2146600 2339400 2647000 1997000 2348700 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4289199999.9999995 22571 370;3451 21153 42463;42464;42465;42466 34157;34158;34159;34160;34161 34160 5 9606 Homo sapiens 0.0314649095794266 RFDGVQDPR Unmodified 1088.5363 0.53630573 3209 Q6IB11;O00264;O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 yes no 0 0 1 5 0.816 1 1 1 34.372 34.434 3 0.0082195 7316 20230619_1885_Aki_TMTPro18x_K_F5 71.349 36.125 350320 299020 316410 318290 371140 390010 366470 367510 581390 249340 322020 292450 274640 249020 309620 295070 334480 305620 323760 273920 325040 320960 381400 388560 376160 373850 568500 260350 340320 293790 283740 260650 315510 296440 319590 290270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 383390000 22572 3209 21154 42467;42468;42469 34162;34163 34162 2 9606 Homo sapiens -0.004420974734102856 RFDLQNPSR Unmodified 1131.5785 0.57850489 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 1 1.5 0.5 1 1 37.134 37.164 3 0.00014159 8565 20230619_1881_Aki_TMTPro18x_K_F2 136.02 104.91 184230 122120 153500 175570 171830 199650 178860 168850 210290 197750 226100 211930 229330 201690 197420 220860 248970 233560 169920 112320 158900 173130 177420 199280 180910 175450 213040 198830 231240 214240 232520 209390 204280 222300 237600 221760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162550000 22573 4016 21155 42470;42471 34164;34165 34165 2 9606 Homo sapiens 0.01797877934995995 RFDTEEEFK Unmodified 1199.5459 0.54586736 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 1 2 0 1 43.967 44.05 3 0.0011134 11716 20230619_1881_Aki_TMTPro18x_K_F2 97.452 68.755 209630 168780 231000 218490 258210 268400 227410 227710 311130 213770 213080 236100 253670 217630 226250 240850 259150 255470 193980 154940 233170 217220 265190 266710 233660 235080 308140 217740 225160 238010 256400 226340 232440 242460 247610 242510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73141000 22574 3650 21156 42472 34166 34166 1 9606 Homo sapiens -0.04592373978516662 RFDTEEEFKK Unmodified 1327.6408 0.64083038 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 2 5 0.816 1 1 1 42.92 42.993 4 0.037492 10781 20230619_1885_Aki_TMTPro18x_K_F5 61.344 46.371 164260 91198 96052 147000 106080 134040 100790 151680 208310 167320 190890 263470 259010 249850 122540 364980 284300 345540 151060 84079 103690 143570 109810 136810 105350 154090 205350 171290 199900 262810 256120 264010 137310 363040 270880 328180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 404400000 22575 3650 21157 42473;42474;42475 34167 34167 1 9606 Homo sapiens -0.009884405073535163 RFDVSGYPTLK Unmodified 1281.6717 0.67173657 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 1 2.5 0.5 1 1 50.085 50.148 3 0.00011769 14164 20230619_1882_Aki_TMTPro18x_K_F3 119.69 71.751 484720 407450 480310 451510 528190 634250 591790 517520 663100 637050 668820 624690 643350 644130 684730 770370 689120 710010 448250 373410 488960 454890 546980 624790 595020 539980 671670 637400 684710 635800 660060 669970 696290 768550 659450 674930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2699000000 22576 909 21158 42476;42477 34168 34168 1 9606 Homo sapiens 0.04216757597555443 RFEAEPLPENTNR Unmodified 1571.7692 0.76921879 4433 Q9BTU6;E9PAM4;B4DEP8 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha yes no 0 0 1 3.5 0.5 1 1 38.967 39.015 3 0.011516 9223 20230619_1882_Aki_TMTPro18x_K_F3 66.485 45.113 30339 31891 26826 28757 34873 46387 35359 39355 43210 29676 35045 33578 36989 28427 37761 32170 44256 35539 28076 29155 27689 29548 35682 45402 35863 40404 43204 30656 36423 33755 37718 29709 38706 32476 42221 33751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94403000 22577 4433 21159 42478;42479 34169 34169 1 9606 Homo sapiens 0.0062049473574461445 RFEDLGSR Unmodified 978.48829 0.4882929 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 1 5 0 1 35.699 35.789 3 0.00057061 7858 20230619_1885_Aki_TMTPro18x_K_F5 106.93 93.156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22578 3610 21160 42480 34170 34170 1 9606 Homo sapiens -0.001811713934216641 RFEECISQSAVK Unmodified 1452.7031 0.70311306 1626 A0A6Q8PGS9;A0A6Q8PGA3;A0A6Q8PGV8;A0A6Q8PFJ4;O95140;A6NLD2;B7Z3H8;O95140-2 MFN2 Mitofusin-2 yes no 0 0 1 7 0 1 44.09 44.173 3 6.6565E-07 10992 20230619_1887_Aki_TMTPro18x_K_F7 148.68 116.61 136520 105580 117900 145950 142100 164180 172180 154890 183010 136170 163880 170730 151480 134880 179170 158280 175780 179840 126050 97003 121890 144240 146570 164360 172090 158450 184850 139750 168620 170560 156360 141530 181400 159960 168240 170570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85952000 22579 1626 21161 42481 34171 34171 1 9606 Homo sapiens -0.005130374306645535 RFEEELAAR Unmodified 1119.5673 0.5672715 2110 Q53GX6;A8K7Q1;Q02818;B4DZX0;Q96BA4;B3KUR6 NUCB1 Nucleobindin-1 yes no 0 0 1 3 0 1 39.309 39.364 3 0.00037651 9319 20230619_1882_Aki_TMTPro18x_K_F3 105.2 75.428 108690 73875 92148 98425 108990 109810 126040 114630 132110 118750 130740 121390 125580 98132 99963 134970 136410 122160 100270 67885 95280 97529 112270 110300 126230 116900 134140 119880 133890 122400 127090 103960 104300 134220 130070 116220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61908000 22580 2110 21162 42482 34172 34172 1 9606 Homo sapiens 0.012270558408545185 RFEELGVK Unmodified 976.53418 0.53418046 3793 X5DNM4;V9HW62;Q04760-2;Q04760 GLO1;HEL-S-74 Lactoylglutathione lyase yes no 0 0 1 7 0.816 1 1 1 44.216 44.28 3 0.00075467 11024 20230619_1887_Aki_TMTPro18x_K_F7 128.86 66.75 1233500 877800 891530 1396300 1310600 1327900 1166000 1175400 2198300 1217700 1325800 1538700 1667100 1551000 948880 2372400 2410900 2387100 1137000 808150 943210 1364900 1326500 1344200 1214600 1213200 2143400 1241000 1416200 1549900 1659900 1642100 1066100 2366700 2292500 2267200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1853199999.9999998 22581 3793 21163 42483;42484;42485 34173 34173 1 9606 Homo sapiens 0.04497473788808293 RFEELTNLIR Unmodified 1289.7092 0.70918471 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4DDN4;Q3B7B9;H3BPE4 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 1 1.5 0.5 1 1 54.24 54.252 3 2.99E-07 16275 20230619_1881_Aki_TMTPro18x_K_F2 180.97 118.67 189280 166210 155570 180940 150360 175650 179490 183670 230420 233160 196770 231890 292460 244520 172730 364770 296680 341190 174850 152280 160930 181510 157620 178260 180850 188400 230730 233010 207750 236060 289900 258180 185670 362660 282970 324150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 316680000 22582 12 21164 42486;42487 34174;34175 34175 2 9606 Homo sapiens 0.07591848863148698 RFEGCTPR Unmodified 1021.4763 0.47634801 545 A0A024R8X4;Q6PK18;Q6PK18-2 FLJ22222;OGFOD3 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 yes no 0 0 1 7 0.816 1 1 1 29.417 29.47 3 0.0059299 5494 20230619_1888_Aki_TMTPro18x_K_F8 82.749 70.513 47353 33988 40632 40320 47157 46292 55841 55140 65822 50213 65901 78660 61634 49712 67792 57206 83280 72833 43701 31188 41933 40303 48677 46575 56092 55592 66409 51869 67529 77536 63334 52640 69615 58276 79460 69050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 27749000 22583 545 21165 42488;42489;42490 34176;34177;34178 34178 3 9606 Homo sapiens -0.03353111408262066 RFEIACYK Unmodified 1085.5328 0.53280025 1128 A0A0S2Z5I7;Q9Y3A5;A0A8V8TMR6;A0A8V8TLA5;A0A8V8TLR8;F8WE72;A0A0S2Z5F7;A0A8V8TLS5;A0A8V8TN15 SBDS Ribosome maturation protein SBDS yes no 0 0 1 2.5 0.5 1 1 46.158 46.237 3 0.0076065 12711 20230619_1881_Aki_TMTPro18x_K_F2 86.136 60.328 624740 506730 600550 649340 640290 662170 696690 665520 811450 662510 633320 610860 669020 579140 667230 738690 742280 695700 577470 465110 612930 644200 663240 668790 702580 679730 812820 668490 659720 621700 681860 606850 683030 737150 709160 661410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 185290000 22584 1128 21166 42491;42492 34179 34179 1 9606 Homo sapiens -0.006544835716113084 RFEKPLEEK Unmodified 1174.6346 0.63462279 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 2 7 0.816 1 1 1 40.921 40.971 4 0.0075386 9908 20230619_1888_Aki_TMTPro18x_K_F8 75.819 49.881 172960 138650 186960 175530 237770 206170 225160 195560 154210 193240 232400 102980 102690 64302 251490 53653 68007 46810 160020 127250 189400 174670 241910 206060 225600 200460 164270 192510 228490 107540 115540 67231 241900 54377 66695 44611 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1058899999.9999999 22585 4246 21167 42493;42494;42495 34180;34181 34181 2 9606 Homo sapiens 0.05429086051799459 RFELYFQGPSSNKPR Unmodified 1824.9271 0.92711641 1091 A0A0S2Z4A5;P33993;C6EMX8;B4DDF5;P33993-2;C9J8M6 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 2 6 0 1 47.418 47.499 4 6.8287E-09 12790 20230619_1886_Aki_TMTPro18x_K_F6 145.1 119.23 239900 221400 237840 235040 203540 217680 239010 221240 281190 264470 269110 246800 313760 229630 247160 268600 308560 253850 221990 202760 241220 236180 215080 221670 240280 227030 283610 264490 278420 250830 315440 239670 255980 268430 294250 241460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 501570000 22586 1091 21168 42496 34182 34182 1 9606 Homo sapiens 0.047649939949906184 RFENAPDSAK Unmodified 1133.5465 0.54653606 1790 K7EKH8;B4DG07;A0A8J9C065;X6RM00;G8JLD3;X6RLX0;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EPP6 ERC1 ELKS/Rab6-interacting/CAST family member 1 yes no 0 0 1 5 0 1 35.485 35.575 3 0.0001429 7758 20230619_1885_Aki_TMTPro18x_K_F5 140.78 106.39 34947 25796 32571 33685 37729 36996 34360 36590 46171 37196 45014 44767 46524 39961 43914 38494 48212 43030 32277 23690 33359 33414 38681 37160 35215 37423 46292 37809 46302 44938 47315 41301 44904 38986 46052 40841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41248000 22587 1790 21169 42497 34183 34183 1 9606 Homo sapiens -0.014895345388140413 RFFMGNQVLK Unmodified 1238.6594 0.65939775 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 1 5 2 1 1 50.511 50.592 3 0.00025678 13852 20230619_1887_Aki_TMTPro18x_K_F7 117.3 66.391 244760 247130 234520 200590 242250 324800 277960 279380 339660 53695 53481 61126 66451 54608 113360 63377 68489 58066 226580 225800 239090 208340 252530 317960 279890 282440 330160 67146 69099 61692 69740 57001 111690 63420 65892 55246 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255130000 22588 3444 21170 42498;42499 34184;34185 34185 2 9606 Homo sapiens 0.04961442653529957 RFFQTACDVPELQDK Unmodified 1852.8778 0.87778296 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 1 7 0 1 53.275 53.345 3 1.4199E-08 15056 20230619_1887_Aki_TMTPro18x_K_F7 143.81 122.26 45102 38956 43176 47591 48403 58399 49429 49609 52470 65641 56341 56440 61725 51169 52023 63797 54538 59014 41704 35731 44131 47485 49932 58023 49884 51702 53528 65183 57856 57518 62351 53634 53278 63608 52188 56086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255970000 22589 707 21171 42500 34186 34186 1 9606 Homo sapiens -0.014540820761567375 RFGEYNSNMSPEEK Unmodified 1686.7308 0.73078437 2147 A8KA74;P78316;E9PFK5;P78316-2 NOP14 Nucleolar protein 14 yes no 0 0 1 4.5 0.5 1 1 42.392 42.455 3 1.7971E-06 10530 20230619_1885_Aki_TMTPro18x_K_F5 121.18 101.34 78612 58998 67864 78790 80874 84412 79032 85141 99688 93673 96254 97415 100980 86612 92565 102340 107700 105780 72571 54193 70085 77999 82947 84950 80445 87140 100260 94335 99129 98363 102540 90534 95161 102760 102890 100440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54636000 22590 2147 21172 42501;42502 34187;34188 34188 2 9606 Homo sapiens -0.08511178961089172 RFGSEFSPELQASFQK Unmodified 1856.9057 0.90571227 2797 CON__Q3SX09 yes yes 0 0 1 5 3 1 1 54.866 54.911 3;4 5.1858E-11 16574 20230619_1881_Aki_TMTPro18x_K_F2 155.56 137.81 + 152640 132140 177270 177820 214400 242310 189450 200640 254850 261620 307390 365260 293680 263180 325970 277160 330170 503910 141380 121320 178590 176620 219190 239130 194580 209450 258050 264260 312770 362320 301760 275850 330920 291050 317070 475570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137500000 22591 2797 21173 42503;42504 34189;34190 34189 2 9606 Homo sapiens 0.011535641756154291 RFGVPVIADGGIQNVGHIAK Unmodified 2047.1327 0.13269251 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 0 1 4 0 1 53.318 53.338 4 7.6086E-30 15530 20230619_1883_Aki_TMTPro18x_K_F4 209.66 185.58 160550 119150 148730 147200 122230 124830 152190 147100 154010 173410 194440 175670 181800 153470 176530 192060 188160 183510 148280 109360 151640 146130 129780 128490 151850 149490 158430 173840 196930 177580 185670 161080 180330 191870 179890 174410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 266250000 22592 1454 21174 42505 34191 34191 1 9606 Homo sapiens 0.15101147454402053 RFHWEQDQIAHMK Oxidation (M) 1740.8155 0.81545747 902 A0A090N7X1;A0A090N7Y2;Q9UG63;Q9UG63-2 ABCF2 ATP-binding cassette sub-family F member 2 yes no 0 1 1 8 0 1 38.991 38.978 5 0.0015102 9109 20230619_1888_Aki_TMTPro18x_K_F8 79.466 71.279 45789 30458 41597 45121 52514 48220 51784 49002 68947 53331 50555 53517 60212 44786 44227 54437 56369 48924 42258 28025 42779 44388 53624 48555 52756 50130 68515 53704 53157 54009 60361 47017 45976 54216 53765 46554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19865000 22593 902 21175 42506 34192 34192 513 1 9606 Homo sapiens -0.025317636338058946 RFLGSGGFIGYAPNLSK Unmodified 1782.9417 0.94170385 2219 B4DGN8;B2R5M9;Q02809;Q02809-2;Q5JXB7;Q5JXB8 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes no 0 0 1 7.5 0.5 1 1 57.801 57.853 3 2.411E-18 16905 20230619_1887_Aki_TMTPro18x_K_F7 177.64 137.98 102690 84937 100850 111740 119690 140440 134070 146080 159340 90530 87322 71269 80381 58600 92689 92030 93074 62311 94950 77976 102980 111010 123310 139890 135080 147280 157800 93978 92606 72927 82820 62647 94043 90294 88836 59611 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44132000 22594 2219 21176 42507;42508 34193 34193 1 9606 Homo sapiens 0.08155066143172007 RFLTSQTK Unmodified 979.54508 0.5450795 4224 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 1 5.5 0.5 1 1 38.5 38.587 3 0.010826 8933 20230619_1885_Aki_TMTPro18x_K_F5 85.733 49.338 146850 96854 94940 115720 149880 230010 142840 163910 321370 20059 23048 29805 30680 26996 43225 25711 30106 26291 135230 88913 101800 116720 152190 222150 149630 168040 304350 28982 38030 29833 31823 27858 42908 25954 28905 24979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86552000 22595 4224 21177 42509;42510 34194 34194 1 9606 Homo sapiens 0.05448876163097793 RFLVTVIK Unmodified 974.62769 0.62768692 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;A0A7I2YQX3;B3KWD0 XPO1 Exportin-1 yes no 0 0 1 7 0 1 51.45 51.528 3 0.0017571 14268 20230619_1887_Aki_TMTPro18x_K_F7 100.84 43.659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22596 3228 21178 42511 34195 34195 1 9606 Homo sapiens 0.13935817961896646 RFNDGSDEK Unmodified 1066.468 0.46795139 3504 V9HW26;P25705;P25705-2;P25705-3;K7EK77;K7ENJ4 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 1 2.67 0.471 1 2 33.39 33.455 3 0.00027532 6984 20230619_1882_Aki_TMTPro18x_K_F3 119.27 37.302 246690 95154 345020 373370 526540 481300 406140 555130 407220 259000 521720 654620 370240 430940 465510 154280 638970 588540 228110 89580 345090 355090 528170 479700 417010 553760 418460 289440 524350 638210 388110 437080 479440 184870 609340 554580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 326350000 22597 3504 21179 42512;42513;42514 34196;34197 34197 2 9606 Homo sapiens -0.06262386843900458 RFNENAADR Unmodified 1091.5108 0.51081926 2270 B2R9B8;H0YAP0;Q96GY0;A0A994J504;A0A994J7X1 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes no 0 0 1 3 0 1 23.354 23.503 3 0.0095384 3910 20230619_1882_Aki_TMTPro18x_K_F3 69.276 24.522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22598 2270 21180 42515 34198 34198 1 9606 Homo sapiens -0.03127571995833023 RFPDFVR Unmodified 935.49774 0.49773538 4465 Q9BXR0;K7EL95;Q71RF8 QTRT1 Queuine tRNA-ribosyltransferase yes no 0 0 1 3 0 1 44.255 44.328 3 0.00362 11544 20230619_1882_Aki_TMTPro18x_K_F3 110.81 88.571 114500 92385 98558 101700 97448 124730 108010 103110 138010 63370 60483 46443 56231 46103 82396 69566 70971 47963 105740 84674 101460 102270 101820 123860 109160 105780 135560 65833 65482 48024 58795 48798 82616 68369 67856 45869 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24315000 22599 4465 21181 42516 34199 34199 1 9606 Homo sapiens 0.027406416827602698 RFPDLNR Unmodified 916.4879 0.48789897 3585 P43246;A0A2R8YG02;A0A2R8Y6P0;E9PHA6;A0A2R8YFH0;Q53FK0;Q53GS1;V9H019;Q53RU4;P43246-2;A0A2R8Y7S8;V9H068;B4DN49;V9H023;V9H0D5;B4DL39;B4DSB9;Q0ZAJ1 MSH2 DNA mismatch repair protein Msh2 yes no 0 0 1 2 0 1 37.961 38.024 3 0.0056193 8874 20230619_1881_Aki_TMTPro18x_K_F2 101.69 63.272 140760 113320 113520 106840 123570 152160 128460 120190 166550 40502 41313 38898 41844 35377 75232 45650 44894 38544 129940 103730 117710 109110 127950 149700 130310 122890 162110 45432 48366 39539 44315 37143 74073 45411 43204 36708 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91233000 22600 3585 21182 42517 34200 34200 1 9606 Homo sapiens 0.026314536773611508 RFPEEPHVPLEQR Unmodified 1632.8372 0.83723877 4267 V9HWF3;Q8TCD5;A0A384NYP3;J3KSX6;J3KRC4;Q8TCD5-2 HEL74;NT5C 5'(3')-deoxyribonucleotidase, cytosolic type yes no 0 0 1 4.5 0.5 1 1 41.218 41.283 4 0.012367 10091 20230619_1883_Aki_TMTPro18x_K_F4 67.234 53.518 146430 96671 130390 132620 118330 126320 139130 104580 145770 164760 163180 159280 221470 151350 162010 182220 184550 195300 135110 88873 133610 130870 124410 127740 139250 110090 148970 163150 169090 161680 221100 158230 167140 183280 176430 185320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 570730000 22601 4267 21183 42518;42519 34201 34201 1 9606 Homo sapiens 0.04613364386432295 RFPGYDSESK Unmodified 1184.5462 0.54620171 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9 RPL5 60S ribosomal protein L5 yes no 0 0 1 6.5 1.12 1 1 1 1 40.324 40.384 3 3.9048E-06 9651 20230619_1886_Aki_TMTPro18x_K_F6 152.67 114.27 976840 777910 863890 912800 1089000 1128100 1063000 1086000 1194900 1200200 1275300 1257500 1396400 1141100 1090500 1575400 1070500 1229000 902240 713430 890580 913740 1112500 1123800 1077500 1115100 1213500 1208600 1309500 1270900 1406200 1203500 1116000 1555400 1025500 1170400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 8591400000 22602 1916 21184 42520;42521;42522;42523 34202;34203;34204 34202 3 9606 Homo sapiens -0.03868954258678059 RFPSQEEFK Unmodified 1166.572 0.57202253 4033 Q5HYK3;B4DP72 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes no 0 0 1 7 0 1 43.012 43.091 3 0.0036146 10512 20230619_1887_Aki_TMTPro18x_K_F7 86.276 49.592 83136 74438 81896 92239 103310 109070 107430 116620 128350 91804 102610 86028 104440 85446 94550 105050 103520 86396 76909 68276 83687 91914 105710 109180 108710 117900 128430 93995 106450 87703 106060 89189 96866 104190 98843 82320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72988000 22603 4033 21185 42524 34205 34205 1 9606 Homo sapiens -0.004600600163939816 RFPVAPLIPYPLITK Unmodified 1724.0389 0.038898694 3611 P49756;P49756-2;P49756-3;H0YE46 RBM25 RNA-binding protein 25 yes no 0 0 1 8 0 1 62.673 62.698 3 0.024775 18964 20230619_1888_Aki_TMTPro18x_K_F8 58.885 46.259 25522 17572 21001 30818 20521 26572 25874 23251 33114 33687 34415 40542 41442 41650 35276 43273 39301 49452 23542 16201 21768 29938 21551 27090 25994 24289 33387 33711 35595 40869 41825 42990 36249 43783 37634 46867 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89550000 22604 3611 21186 42525 34206 34206 1 9606 Homo sapiens 0.20584080090065981 RFPVGPPK Unmodified 896.52322 0.52322184 3446 P13521;B4DQJ6 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 1 5.5 0.5 1 1 42.024 42.113 3 0.0094106 10431 20230619_1885_Aki_TMTPro18x_K_F5 81.215 61.076 152760 131550 149800 206050 104580 110720 206900 203900 211010 192250 243020 230020 209720 190900 208690 213260 243190 219850 141280 121000 152130 200660 114840 121260 202800 201700 215720 195960 246310 230560 215150 199310 214150 214330 232190 208830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 248690000 22605 3446 21187 42526;42527 34207 34207 1 9606 Homo sapiens 0.07082116205185685 RFQASQGENLEGK Unmodified 1462.7165 0.71645494 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67;Q7Z3K3-3;B4DSK8 POGZ Pogo transposable element with ZNF domain yes no 0 0 1 6 0 1 38.965 39.048 3 0.0020608 9171 20230619_1886_Aki_TMTPro18x_K_F6 75.102 46.897 20560 15297 19018 19227 21782 21567 23013 22769 26033 25890 24329 28354 23993 22665 25530 28609 31116 30795 18988 14042 19488 19130 22425 21665 23224 23259 26292 26068 25061 28466 24596 23874 26259 28767 29715 29227 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66354000 22606 4164 21188 42528 34208 34208 1 9606 Homo sapiens 0.003605366729743764 RFQELQR Unmodified 975.52501 0.52501276 2124 A8K9T9;A8K8N7;O15067 PFAS Phosphoribosylformylglycinamidine synthase yes no 0 0 1 5.33 3.09 1 1 1 33.121 33.151 3 0.0016351 6764 20230619_1888_Aki_TMTPro18x_K_F8 144.35 83.389 241760 189090 212740 212410 260350 262440 254890 253820 309630 175090 214280 169020 178280 148720 221190 202800 234310 145740 223260 173360 219210 213340 266460 261480 258920 257770 308030 181240 222540 171510 185200 156860 224760 199830 223450 139350 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 131340000 22607 2124 21189 42529;42530;42531 34209;34210 34210 2 9606 Homo sapiens 0.03627125223147232 RFQILGK Unmodified 860.52322 0.52322184 50 Q8WXX5;A0A024QZN2 DNAJC9;hCG_2024613 DnaJ homolog subfamily C member 9 yes no 0 0 1 6 0 1 46.497 46.581 3 0.0034308 12373 20230619_1886_Aki_TMTPro18x_K_F6 117.93 64.767 448430 349930 379790 431340 421620 476280 454410 434690 513170 461080 470840 413040 467750 401280 423260 506520 520680 484920 414010 321110 392480 429450 435820 477250 458020 447720 517690 463290 484530 421440 475530 419920 437010 505860 496990 460940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212790000 22608 50 21190 42532 34211 34211 1 9606 Homo sapiens 0.08738116205188362 RFQLEELRK Unmodified 1217.6881 0.68805534 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;A0A024QZ91;A0A024QZC0 ATXN2L Ataxin-2-like protein yes no 0 0 2 2 0 1 43.345 43.427 4 0.00091157 11407 20230619_1881_Aki_TMTPro18x_K_F2 107.55 61.165 352840 268010 291100 350860 255610 356890 329000 339130 439170 374480 379050 369810 438030 330590 286710 500880 441860 408470 325650 246120 300760 347480 271220 359790 330870 348660 438600 376600 394010 374650 437910 351360 303950 494760 421030 389070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212320000 22609 4285 21191 42533 34212 34212 1 9606 Homo sapiens 0.08791883554295055 RFQLLEGPPESMGR Unmodified 1615.8141 0.81406049 1080 A0A0S2Z3X8;P31150;B4DHX4;B4DH24;G5E9U5;A0A0S2Z426 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 1 3.67 3.09 1 1 1 50.15 50.195 3 1.3981E-16 13625 20230619_1888_Aki_TMTPro18x_K_F8 208.81 196.83 222120 160860 185670 239310 186780 261180 212030 226930 354990 241290 235140 287470 272570 243360 214460 321670 300540 325950 204960 147960 192050 235320 195420 261420 216650 234610 348450 244780 248770 288190 274490 256550 224460 321880 286900 309450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 318190000 22610 1080 21192 42534;42535;42536 34213;34214 34214 2 9606 Homo sapiens 0.0307860227742367 RFQLLEGPPESMGR Oxidation (M) 1631.809 0.80897511 1080 A0A0S2Z3X8;P31150;B4DHX4;B4DH24;G5E9U5;A0A0S2Z426 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 1 1 7.5 0.5 1 1 46.452 46.521 3 0.0010033 12082 20230619_1888_Aki_TMTPro18x_K_F8 97.073 86.018 315240 256780 275450 369720 278790 266450 302140 315990 357830 383850 417990 406090 376190 333630 338270 425750 427280 446760 291180 235990 283660 362560 289780 278470 305150 321370 363840 384830 424050 408860 383620 351380 350060 427250 408100 424040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 499470000 22611 1080 21192 42537;42538 34215;34216 34216 644 2 9606 Homo sapiens 0.01834298414814839 RFQLVDSR Unmodified 1019.5512 0.55122751 1461 Q53EW8;A0A384NKQ2;Q16762;B4DVZ4 TST Sulfurtransferase;Thiosulfate sulfurtransferase yes no 0 0 1 2 0 1 38.637 38.703 3 0.015424 9225 20230619_1881_Aki_TMTPro18x_K_F2 71.451 53.011 242300 186600 208390 214830 277440 341230 299900 288120 353030 269100 256100 227880 303340 229790 232380 277410 299210 218500 223710 171130 215680 216300 283730 334130 302520 297360 352630 271980 269140 233440 304640 239570 241450 274620 285070 208450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39301000 22612 1461 21193 42539 34217 34217 1 9606 Homo sapiens 0.04223394394614388 RFQNVAK Unmodified 861.48209 0.48208531 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;B4DU71;B4DHT9;Q58FF3 HSP90B1;HEL-S-125m;TRA1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 0 0 1 3.5 0.5 1 1 35.384 35.436 3 0.0018205 7739 20230619_1882_Aki_TMTPro18x_K_F3 132.09 93.856 1952200 1156300 1884200 1711000 3261600 3909600 2804000 2992500 4294800 188930 209940 168860 133650 136360 883980 127150 283160 129590 1801500 1064500 1940200 1710000 3272000 3762300 2895500 3042900 4114800 349340 405310 173820 176350 141160 848250 130520 275670 123620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1474099999.9999998 22613 3452 21194 42540;42541 34218;34219 34218 2 9606 Homo sapiens 0.04580355165705896 RFQSVESGANNVVFIR Unmodified 1821.9486 0.94858014 227 O60362;A0A024R388;Q6MZT3;Q9NXG2;H3BNW0 44M2.1;THUMPD1;DKFZp686C1054 THUMP domain-containing protein 1 yes no 0 0 1 3 0 1 48.69 48.77 3 1.8514E-06 13606 20230619_1882_Aki_TMTPro18x_K_F3 118.5 97.839 46708 40623 45205 53831 57194 56972 56068 52496 74226 82215 86926 91634 83831 65160 79363 65408 91331 90155 43195 37290 46273 53298 58412 57288 57150 54748 75135 81763 88477 91600 85400 68166 81358 67159 87261 85372 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142360000 22614 227 21195 42542 34220 34220 1 9606 Homo sapiens 0.07048379023694906 RFQVEQIGDNK Unmodified 1332.6786 0.67861287 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A0U1RQJ2;A0A494C073;A0A494C1U5;H0YC65;Q9BSP9 DST Dystonin yes no 0 0 1 7 0 1 43.361 43.44 3 1.2009E-05 10671 20230619_1887_Aki_TMTPro18x_K_F7 143.42 115.5 58089 48314 56616 60554 63724 67321 55532 59240 75303 75516 79613 73647 84229 61231 70261 84553 89455 83869 53708 44331 57751 60229 65426 67390 57108 61503 75797 75397 81619 74462 85100 64858 72827 84507 85366 79687 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70665000 22615 1693 21196 42543 34221 34221 1 9606 Homo sapiens 0.025580704781532404 RFQVEQIGENK Unmodified 1346.6943 0.69426293 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;A0A804HL78;O94854;H0Y314;Q6IPG6;H0Y6T5;Q96IQ1;Q6ZQZ4;H0Y4F5;H0Y7I1 MACF1;KIAA0754 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5;Uncharacterized protein KIAA0754 yes no 0 0 1 7 0 1 43.607 43.686 3 5.4435E-09 10754 20230619_1887_Aki_TMTPro18x_K_F7 176.32 102.43 178400 122660 167860 184350 206210 229150 211660 212920 292580 171750 171360 181310 217080 160670 158890 228390 214280 205190 164720 112860 172090 181590 211480 227840 215460 217520 288330 176340 183510 183070 217300 170070 166030 226910 204420 195170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96991000 22616 1566 21197 42544 34222 34222 1 9606 Homo sapiens 0.034783569951969184 RFQVVDSR Unmodified 1005.5356 0.53557744 1209 A0A140VJX3;P25325;P25325-2;Q2VEU1;B1AH49;Q59HD5 MPST 3-mercaptopyruvate sulfurtransferase;Sulfurtransferase yes no 0 0 1 4.5 3.04 1 1 1 1 34.557 34.588 3 0.00050063 7322 20230619_1888_Aki_TMTPro18x_K_F8 141.2 99.087 364980 297940 359280 324300 456100 462260 405530 394930 472000 364700 419940 401720 381860 318620 419290 430220 476810 384710 337440 273030 366620 327320 464500 455610 413860 407230 474700 371540 431620 403580 392790 337220 428900 427980 455010 366220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 371240000 22617 1209 21198 42545;42546;42547;42548 34223;34224;34225 34225 3 9606 Homo sapiens 0.0330310787757071 RFSDIQIR Unmodified 1033.5669 0.56687757 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 1 2.5 0.5 1 1 40.849 40.923 3 0.00081429 10206 20230619_1881_Aki_TMTPro18x_K_F2 118.26 66.41 341820 260320 292070 313320 291350 325900 296320 319210 337740 361550 404470 391420 436790 350460 367730 423410 431420 419180 315550 238840 300910 312280 303030 328470 299980 327680 344520 363980 413110 394770 441340 366800 378960 423930 412080 398230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 443220000 22618 2973 21199 42549;42550 34226;34227 34226 2 9606 Homo sapiens 0.051436809116466975 RFSDQFPLPLK Unmodified 1346.7347 0.73467118 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;Q92973-3;S4R398 TNPO1 Transportin-1 yes no 0 0 1 4 0 1 56.348 56.356 3 0.012733 16820 20230619_1883_Aki_TMTPro18x_K_F4 67.08 48.768 199070 205260 229520 251580 182810 231590 175200 192060 253410 220710 207890 154850 205490 171790 218920 213040 225370 238130 184610 188160 230020 249960 193700 234770 179700 199750 251900 219690 215000 160960 210450 178990 222700 214820 215650 225860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188590000 22619 629 21200 42551 34228 34228 1 9606 Homo sapiens 0.07517323385604868 RFSEGTSADR Unmodified 1124.521 0.52104959 896 V9HW24;A0A087X2I1;P62333;H0YJX2 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 1 3 0 1 27.287 27.407 3 0.047417 4669 20230619_1882_Aki_TMTPro18x_K_F3 44.82 23.372 13337 9264.2 11979 14797 14922 15818 14601 14642 18857 16110 17793 17052 18738 16294 15584 16268 22441 18216 12310 8530.5 12342 14490 15263 15885 14869 15081 18920 16240 18338 17243 18954 16833 16281 16458 21376 17297 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18374000 22620 896 21201 42552 34229 34229 1 9606 Homo sapiens -0.03623009061220728 RFSEGTSADREIQR Unmodified 1650.8074 0.80739521 896 V9HW24;A0A087X2I1;P62333;H0YJX2 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 2 4.5 0.5 1 1 31.483 31.554 4 1.8696E-22 6124 20230619_1883_Aki_TMTPro18x_K_F4 201.3 173.97 51839 45363 45656 42331 72723 53591 60311 56099 59930 50431 60810 45128 56598 45923 55743 52553 63541 47481 47908 41508 47249 43200 72853 53498 61501 56977 61093 51127 62069 46157 57848 47705 57103 52440 60609 45210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69070000 22621 896 21202 42553;42554 34230;34231 34230 2 9606 Homo sapiens 0.008023806504525055 RFSMVVQDGIVK Oxidation (M) 1393.7388 0.73877028 3528 V9HW35;P30044-2;P30044;P30044-3;P30044-4 HEL-S-55;PRDX5 Peroxiredoxin-5, mitochondrial yes no 0 1 1 2 0 1 47.699 47.77 3 0.020572 13422 20230619_1881_Aki_TMTPro18x_K_F2 86.756 51.75 434040 357170 418600 468250 538930 475080 544880 519860 543740 401590 427630 382110 394370 359880 389270 334350 414260 394170 401240 327900 428520 463830 549360 481160 548830 524940 548980 411780 442550 388140 403520 370640 396980 339990 395980 373830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 387060000 22622 3528 21203 42555 34232 34232 2192 1 9606 Homo sapiens 0.0576504481698521 RFSPIPFPPLSYK Unmodified 1547.85 0.85003529 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;I3L0J9 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 1 8 0 1 61.168 61.2 3 0.0019591 18308 20230619_1888_Aki_TMTPro18x_K_F8 76.262 51.47 78985 62753 60469 77000 58119 74448 77420 66965 67771 50359 59550 49692 59506 40252 57726 65774 70959 47453 72880 57578 63050 76533 61162 75279 76617 68552 69180 51789 61437 50255 60601 43199 59496 64638 67602 45351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84855000 22623 1863 21204 42556 34233 34233 1 9606 Homo sapiens 0.09802427516615353 RFTDEESR Unmodified 1038.473 0.47303677 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8;H0YF00 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 1 1.5 0.5 1 1 28.969 29.005 3 0.00094215 5607 20230619_1880_Aki_TMTPro18x_K_F1 113.22 82.146 93236 52045 76801 94969 123230 121160 111530 117370 129900 96721 121210 111610 116130 104330 102600 70516 129210 119480 85916 48063 80184 92627 123950 120400 113660 119590 130830 99374 124470 112350 118090 106120 105840 74269 123300 113000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 508240000 22624 4629 21205 42557;42558 34234;34235 34234 2 9606 Homo sapiens -0.044660829812755765 RFTPPIYQPK Unmodified 1245.687 0.68699271 812 A0A0G2JMS5;A0A087WU62;A0A087X2D5;B4DEF8;Q9BRJ2;Q3MHC5 MRPL45 39S ribosomal protein L45, mitochondrial yes no 0 0 1 5.5 0.5 1 1 46.326 46.407 3 0.029514 12366 20230619_1886_Aki_TMTPro18x_K_F6 58.676 29.933 123970 104460 133830 160310 153390 177800 157450 170780 183950 140030 154240 141190 150860 120370 133070 149660 150460 125320 114730 96065 135610 157430 157950 178200 159360 174100 184580 143270 159390 142680 153200 126390 136670 148530 143620 119380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155670000 22625 812 21206 42559;42560 34236 34236 1 9606 Homo sapiens 0.07397669185434097 RFTSGQCQVR Unmodified 1237.5986 0.59858841 734 Q9HBM8;Q71VH6;B4DRH1;A0A024RCV5;Q99943;B3KPH3 AGPAT1 1-acyl-sn-glycerol-3-phosphate acyltransferase;1-acyl-sn-glycerol-3-phosphate acyltransferase alpha yes no 0 0 1 4 0 1 29.468 29.537 3 0.00060075 5434 20230619_1883_Aki_TMTPro18x_K_F4 90.685 68.812 13563 11927 13619 13887 19400 17818 15387 16981 20505 5555.1 6352.2 8092.3 9889.7 7183.2 7910.6 6379.8 10943 7092.3 12548 10934 13913 13918 19566 17708 15899 17096 19995 6331.1 7350 8072.8 9889.7 7401.7 8234.7 6470.9 10414 6742.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8292300 22626 734 21207 42561 34237 34237 1 9606 Homo sapiens -0.010706943967079496 RFVFHQEQVYCPDCAK Unmodified 2082.9404 0.94039999 3865 Q13642-4;Q13642-5;Q13642-1;Q53FI7;B7Z4B7;B7Z5V0;B7Z9A1;B7Z5T3;B7Z6U8;B3KRI9 FHL1 Four and a half LIM domains protein 1 yes no 0 0 1 4.5 3.5 1 1 45.025 45.039 4 2.6248E-11 11459 20230619_1888_Aki_TMTPro18x_K_F8 128.06 123.42 204290 146880 170110 191510 146750 176270 170270 200150 237370 226230 252900 264320 287790 234930 184060 330010 292850 286960 188500 134900 175420 189540 155240 179900 172530 203480 238610 228400 260170 265790 287720 248270 195810 327230 279100 273030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 518560000 22627 3865 21208 42562;42563 34238;34239 34239 2 9606 Homo sapiens -0.05775259279562306 RFVGHTK Unmodified 843.47152 0.47152062 2907 P63244;E9KL35;J3KPE3;H0Y8W2;H0YAF8;H0YAM7;D6RHH4;D6R9L0;D6R9Z1;D6RFX4;B4DVD2;D6RFZ9;E9PD14;D6RAU2 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 1 4 0.816 1 1 1 29.128 29.211 3 0.0052948 5242 20230619_1883_Aki_TMTPro18x_K_F4 104.44 90.929 90212 45672 74560 78608 116520 94792 96191 100090 113830 78975 97398 80382 84709 69692 92229 52651 107050 71246 83098 42166 77653 76855 116960 94777 98691 101290 114200 81039 100050 81189 87216 71386 94229 54371 102040 67604 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76179000 22628 2907 21209 42564;42565;42566 34240 34240 1 9606 Homo sapiens 0.04352372511266367 RFVGQSGQEDK Unmodified 1249.6051 0.60511357 4272 Q8TDD1;Q8TDD1-2;H0YHH7 DDX54 ATP-dependent RNA helicase DDX54 yes no 0 0 1 5.5 0.5 1 1 34.786 34.857 3 3.5092E-09 7567 20230619_1886_Aki_TMTPro18x_K_F6 182.71 144.98 62096 38330 53333 56658 65079 72336 60177 59675 83050 60754 72423 75898 94782 70785 51344 74103 103480 88213 57264 35280 55099 55886 66608 71642 61657 61873 82835 61873 75741 76198 93951 73422 55962 75135 98399 83692 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36211000 22629 4272 21210 42567;42568 34241;34242 34242 2 9606 Homo sapiens -0.009704779643470829 RFVMEVEVDGQK Oxidation (M) 1451.7079 0.70786408 3823;1133 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;B4DDF3;A0A0S2Z5K8;V9HWK4;Q96SI9-2;Q96SI9 ILF3;HEL162;STRBP Interleukin enhancer-binding factor 3;Spermatid perinuclear RNA-binding protein no no 0 1 1 4.5 0.5 1 1 45.198 45.259 3 4.9606E-05 11816 20230619_1883_Aki_TMTPro18x_K_F4 143.31 106.63 397440 285940 282740 401540 414880 426830 411840 403250 458100 421540 481250 478660 492680 368800 422040 484240 423420 498910 366350 262840 299450 396040 420480 429130 416710 414190 464910 426780 493100 479730 498700 390370 430860 485380 405640 473430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 471860000 22630 3823;1133 21211 42569;42570 34243 34243 704 1 9606 Homo sapiens 7.846712105674669E-05 RFVMEVEVDGQK Unmodified 1435.7129 0.71294946 3823;1133 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;B4DDF3;A0A0S2Z5K8;V9HWK4;Q96SI9-2;Q96SI9 ILF3;HEL162;STRBP Interleukin enhancer-binding factor 3;Spermatid perinuclear RNA-binding protein no no 0 0 1 5.67 0.471 1 2 49.606 49.683 2;3 1.1258000000000001E-24 13771 20230619_1886_Aki_TMTPro18x_K_F6 222.18 138.54 76279 63305 71786 79026 68653 79265 78224 74326 93709 84151 93104 91783 91412 82593 84237 95592 104210 98197 70505 58085 73296 78513 71873 80019 78801 76569 94525 84782 95466 92538 93063 86165 86946 95971 99475 93263 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151540000 22631 3823;1133 21211 42571;42572;42573 34244;34245 34245 2 9606 Homo sapiens 0.01252150574737243 RFVNDTLR Unmodified 1019.5512 0.55122751 4636 Q9P013 CWC15 Spliceosome-associated protein CWC15 homolog yes yes 0 0 1 1.5 0.5 1 1 36.582 36.611 3 0.0059107 8619 20230619_1880_Aki_TMTPro18x_K_F1 90.761 47.678 106210 79614 83227 89476 110870 146930 110220 113370 149560 51576 56083 56110 54774 51141 59637 54729 69509 61964 97979 73004 86947 90290 113280 143360 112290 116450 146090 55797 61897 56648 56272 53097 61069 55365 66358 58804 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78103000 22632 4636 21212 42574;42575 34246 34246 1 9606 Homo sapiens 0.04223394394625757 RFVNVVPTFGK Unmodified 1262.7135 0.71354181 2944 E9PR30;P62861 FAU 40S ribosomal protein S30 yes no 0 0 1 6.5 0.5 1 1 52.907 52.981 3 0.00014242 14904 20230619_1887_Aki_TMTPro18x_K_F7 117.86 86.263 516690 428680 480540 477730 373470 491900 549170 530850 507930 357550 330480 317090 469370 325040 404340 492500 408550 350800 477540 392900 489680 478900 401590 497090 542240 535090 512330 369600 353560 324600 471130 344040 413000 484050 390460 334910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 492740000 22633 2944 21213 42576;42577 34247;34248 34248 2 9606 Homo sapiens 0.09269358076744538 RFVSEAELDER Unmodified 1349.6575 0.65754307 411 H3BN22;Q6P4H7;H3BSF0;H3BQQ6;H3BTI2;H3BTP8;H3BSY6;H3BP64;H3BUL4;H3BMX9;A0A024R6T8;Q9GZU8;H3BPH9;H3BPF9 FAM192A;NIP30 Protein FAM192A yes no 0 0 1 2.5 0.5 1 1 40.773 40.839 3 1.4278E-06 10168 20230619_1881_Aki_TMTPro18x_K_F2 152.47 93.486 185780 139170 145450 196360 177590 194440 161160 161540 231570 201160 194450 195580 221420 174100 163090 226420 215270 192340 171390 127910 151870 193420 181710 195990 165600 168440 230470 201130 202340 198090 222320 183090 170090 224610 205300 183130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 360400000 22634 411 21214 42578;42579 34249 34249 1 9606 Homo sapiens -0.003299396213833461 RFVSEGDGGR Unmodified 1078.5156 0.51557028 2235 B4DKX4;B2R6E2;Q53EL6-2;Q53EL6 PDCD4 Programmed cell death protein 4 yes no 0 0 1 4 0.707 1 2 1 30.285 30.361 2;3 0.00014644 5730 20230619_1882_Aki_TMTPro18x_K_F3 115.29 73.178 57958 41042 52930 49346 99587 100520 78787 78755 93472 59607 81282 94294 74597 68582 79748 77560 100870 100600 53509 37667 54863 49816 99148 97269 81055 81408 93795 62388 83781 93271 76661 72049 82153 79090 96309 95307 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 433280000 22635 2235 21215 42580;42581;42582;42583 34250;34251 34250 2 9606 Homo sapiens -0.02054687853046744 RFVTGGQR Unmodified 919.4988 0.49879801 1557 A0A7I2YQL3;A0A7P0SXD0;A0A7I2YQQ9;A0A499FIZ0;Q9H7D7-2;Q9H7D7;H0Y9R3;B4DRF0;A0A994J7J9 WDR26 WD repeat-containing protein 26 yes no 0 0 1 5 0.816 1 1 1 28.597 28.656 3 0.0092539 5228 20230619_1885_Aki_TMTPro18x_K_F5 81.642 57.67 43592 31605 36949 43212 59122 59954 51942 58403 80309 17723 16362 15848 19882 12850 32020 16909 19047 14343 40229 29042 38455 42888 59492 59305 53606 58652 77469 20153 19972 16110 20750 13585 31543 16833 18317 13668 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 24697000 22636 1557 21216 42584;42585;42586 34252 34252 1 9606 Homo sapiens 0.03582856051673389 RGAAASPEPAR Unmodified 1081.5629 0.56285483 1537;3770 A0A481SVA1;P84157;P84157-3;A0A481SUX4;P84157-2 MXRA7 Matrix-remodeling-associated protein 7 no no 0 0 1 5.5 1.12 1 1 1 1 23.061 23.129 3 2.4907E-05 3802 20230619_1885_Aki_TMTPro18x_K_F5 140 113.49 139740 82452 161940 159670 190440 208210 184920 207150 214340 140500 227830 254030 173930 185550 226760 107090 236270 211240 129160 76190 163080 155440 195360 206670 187760 209880 216800 149080 231030 250200 181980 189400 229490 115140 225790 199620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 173300000 22637 1537;3770 21217 42587;42588;42589;42590 34253 34253 1 9606 Homo sapiens 0.02533591417932257 RGAAGDWGER Unmodified 1073.5003 0.50025457 3905 Q14978-3;B2RAU8;A0A0A0MRM9;Q14978;Q14978-2;Q96J17 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 0 0 1 4 0.816 1 1 1 30.73 30.806 3 0.0010012 5825 20230619_1883_Aki_TMTPro18x_K_F4 86.463 48.907 224980 184800 217970 220380 235830 251710 235430 243340 261290 251250 275920 259910 307990 251260 245490 248430 311880 245260 207980 169490 222270 220100 243500 252010 238290 249350 265350 253800 283650 263200 310310 259370 254370 249570 297300 233230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 893100000 22638 3905 21218 42591;42592;42593 34254;34255;34256 34255 3 9606 Homo sapiens -0.03355554650238446 RGACSVGTNVR Unmodified 1175.5829 0.58293834 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;A0A804HI02;B4DE53;I6L959;Q9BTW9-5;A0A804HIC0;A0A804HL21 TBCD Tubulin-specific chaperone D yes no 0 0 1 1 0 1 26.636 26.636 3 0.0030121 4703 20230619_1880_Aki_TMTPro18x_K_F1 65.395 48.763 4313.8 2203 5112.4 5602.4 6267.9 7682.6 4470 5581.8 7075.5 3965.6 6684.8 7743.8 6776.7 8005.8 5511 4205.3 8837.3 8676.6 3985.6 2047.3 5146.8 5396.2 6380.6 7553 4696.4 5803.7 7032.4 4219.3 6885.6 7693.7 6872 8042.6 5801.5 4543.3 8422.2 8194.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5440700 22639 1722 21219 42594 34257 34257 1 9606 Homo sapiens 0.002170190862443633 RGADDDRPSWR Unmodified 1329.6174 0.61740959 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 2 4 0.816 1 1 1 28.828 28.914 3 0.0076389 5115 20230619_1883_Aki_TMTPro18x_K_F4 78.342 56.11 5657.3 2832.1 3984.3 4372.1 4659.6 4453.7 3609.1 4482.3 4712.3 4619.2 5807.1 5643.4 6584.9 3529 5134.5 5036.6 6190.4 4642.3 5205.6 2611.1 4196.4 4288.3 4759.9 4498.1 3738.9 4579.5 4782.7 4689.7 5937.3 5612.1 6612.6 3797.5 5303.3 5015.7 5902 4419.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38742000 22640 3152 21220 42595;42596;42597 34258 34258 1 9606 Homo sapiens -0.03421441501291156 RGAEDDRGPWR Unmodified 1313.6225 0.62249497 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 2 4.5 1.12 1 1 1 1 29.176 29.245 4 0.00013035 5415 20230619_1885_Aki_TMTPro18x_K_F5 103.43 79.051 59103 36160 58167 62239 72157 68762 66445 76606 91933 69111 81169 86026 92105 72171 66765 76571 91238 78579 54558 33349 59385 60769 73650 69200 68129 77488 91721 70790 84258 86089 92433 75153 69732 76973 86972 74660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 256020000 22641 3152 21221 42598;42599;42600;42601 34259;34260 34260 2 9606 Homo sapiens -0.021771376387050623 RGAEIIVCTPGR Unmodified 1327.7031 0.70305348 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 1 1 0 1 38.564 38.564 3 1.5872E-08 9419 20230619_1880_Aki_TMTPro18x_K_F1 145.71 111.82 64187 39171 48111 61070 54845 57059 57662 68350 70069 68300 71296 84511 76934 65111 54532 91297 90447 79372 59135 36079 50382 59793 56543 58241 58386 69027 70741 69491 73396 84398 77316 69151 58028 90546 86115 75555 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81130000 22642 1002 21222 42602 34261 34261 1 9606 Homo sapiens 0.052310073599755924 RGAGAELK Unmodified 800.45045 0.45045083 319 A0A024R542;Q9C0C2;B3KXS7;Q9C0C2-2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes no 0 0 1 7 0 1 32.06 32.152 3 0.071638 6199 20230619_1887_Aki_TMTPro18x_K_F7 38.776 14.573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22643 319 21223 42603 34262 34262 1 9606 Homo sapiens 0.04224362411753191 RGAGGAGAGPGGGGSGGVAK Unmodified 1496.7444 0.74440102 1786 H0YLD8;H0YLW6;H0YLM1;A0A8I5QJ71 SHF yes no 0 0 1 2 0 1 31.144 31.208 3 1.2945E-06 6184 20230619_1881_Aki_TMTPro18x_K_F2 89.374 53.415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22644 1786 21224 42604 34263 34263 1 9606 Homo sapiens 0.01589859653017811 RGAGMPGQHGQITQQELDTVVK Oxidation (M) 2365.1808 0.18084127 193 Q53FS4;B2R774;A0A024R2A7;P49257 LMAN1 Protein ERGIC-53 yes no 0 1 1 7 0 1 41.804 41.875 4 4.7145E-08 10049 20230619_1887_Aki_TMTPro18x_K_F7 108.18 91.101 13066 10386 12153 12847 15046 20747 12207 14279 22519 10632 15497 16251 11735 13249 12464 11047 13054 13364 12073 9529.9 12472 12868 15381 20217 12791 14930 22028 11143 16066 16139 12156 13632 12687 11275 12486 12667 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30301000 22645 193 21225 42605 34264 34264 122 1 9606 Homo sapiens 0.05285808521512081 RGALIVLEGVDR Unmodified 1296.7514 0.75138388 3498 Q6FGU2;P23919;P23919-2;G5E9E9 DTYMK Thymidylate kinase yes no 0 0 1 8 0 1 49.435 49.508 3 1.077E-09 13288 20230619_1888_Aki_TMTPro18x_K_F8 156.81 117.49 99221 82038 93606 86814 74103 92807 98640 90342 111220 106190 91727 91293 101520 89503 105510 115010 98546 98550 91710 75158 95236 87427 79280 93349 98421 92902 111840 106050 95490 93309 103510 93709 106890 114220 94356 93778 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 372660000 22646 3498 21226 42606 34265 34265 1 9606 Homo sapiens 0.11487824271557656 RGALQGSAWQVSSEDVR Unmodified 1844.9129 0.91292291 1662 B3KNR6;A0A7I2V4E5;Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2;Q6ZNR3 LAS1L Ribosomal biogenesis protein LAS1L yes no 0 0 1 7.5 0.5 1 1 43.268 43.312 3 1.6127999999999998E-23 10601 20230619_1887_Aki_TMTPro18x_K_F7 202.84 165.24 33928 30657 38230 35691 36540 43165 41790 36694 43148 40705 39220 42430 45080 36117 35189 39452 38824 33433 31425 28101 38443 35738 38232 42933 41871 38055 43734 40986 40697 42758 45337 37638 36177 39254 37074 31838 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121510000 22647 1662 21227 42607;42608 34266 34266 1 9606 Homo sapiens 0.02426296776025083 RGALVVEDNDSGVPVEETK Unmodified 2013.0015 0.0014631481 2443 B3KY42;Q96PZ0;Q96PZ0-2;B3KRB2;E7EUH7 PUS7 Pseudouridylate synthase 7 homolog yes no 0 0 1 3 0 1 45.958 46.034 3 1.9897E-14 12301 20230619_1882_Aki_TMTPro18x_K_F3 149.95 135.03 44273 34255 42561 42313 39730 45194 42592 41775 48732 58965 53758 62679 68104 59755 53892 79465 68521 82082 40911 31435 43331 42114 41590 45407 42988 43378 49576 58776 55600 63361 68404 62775 56005 79599 65513 77885 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153750000 22648 2443 21228 42609 34267 34267 1 9606 Homo sapiens 0.03548247505159452 RGALVVEDNDSGVPVEETKK Unmodified 2141.0964 0.096426166 2443 B3KY42;Q96PZ0;Q96PZ0-2;B3KRB2;E7EUH7 PUS7 Pseudouridylate synthase 7 homolog yes no 0 0 2 4 0 1 44.383 44.427 4 6.7743E-08 11466 20230619_1883_Aki_TMTPro18x_K_F4 113.63 94.915 92724 63251 83776 88334 79083 90869 88035 82743 95786 139380 159890 181260 164900 126580 138720 140060 164710 194230 85582 58151 85803 87158 82808 91498 88549 86650 99840 138980 161360 180090 166780 133210 142970 143550 157540 183800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145140000 22649 2443 21229 42610 34268 34268 1 9606 Homo sapiens 0.07152180976345335 RGAPAAATAPAPTAHK Unmodified 1486.8005 0.80045934 4293;1866 Q92522;A0A994J4R3 H1FX Histone H1x no no 0 0 1 2.5 0.5 1 1 31.477 31.547 4 2.9436E-11 6330 20230619_1881_Aki_TMTPro18x_K_F2 161.8 127.41 230250 171790 243250 253920 255790 280270 273180 276490 290230 219930 277180 296560 268390 265330 253760 214780 328800 269240 212890 157980 246280 249960 265090 281210 275020 281260 293880 227740 284770 296420 273840 271910 262180 219900 313460 255370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 571020000 22650 4293;1866 21230 42611;42612 34269;34270 34269 2 9606 Homo sapiens 0.07653112560478803 RGAPPSSNIEDFHGLLPK Unmodified 1934.001 0.0010096381 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991;H0Y8T4 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 1 1 0 1 49.644 49.644 4 1.0169E-13 14223 20230619_1880_Aki_TMTPro18x_K_F1 157.11 130.68 117440 102420 109870 119250 130260 148110 125550 132200 187120 149580 146300 159110 169240 161300 128610 226120 231440 258030 108580 93896 112610 119430 133730 147220 128740 136580 185470 150670 153050 161290 170350 169730 137720 227620 220630 244640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 268320000 22651 1059 21231 42613 34271;34272 34272 2 9606 Homo sapiens 0.07136917366642592 RGAQLAK Unmodified 742.44497 0.44497152 3422 Q53G61;Q53G21;P09661;H0YLR3;H0YMA0 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 1 3 0 1 31.382 31.468 3 0.021897 6158 20230619_1882_Aki_TMTPro18x_K_F3 78.616 28.591 82310 45589 114990 109530 173550 164800 120250 159560 115430 68702 121920 112490 73186 77075 116510 57164 126750 92513 76207 42299 114890 105970 173870 162230 124330 160790 117920 75629 122670 111080 78412 79566 117930 59951 120940 87620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22364000 22652 3422 21232 42614 34273 34273 1 9606 Homo sapiens 0.06344683619954594 RGATPPAPPR Unmodified 1018.5672 0.56721192 4133 Q6SPF0 SAMD1 Atherin yes yes 0 0 1 1 0 1 28.054 28.054 3 0.0030613 5214 20230619_1880_Aki_TMTPro18x_K_F1 77.744 42.092 7852.2 5639.7 8271.8 8592.8 10167 13370 11935 10960 13241 10836 10707 11869 13041 9638 10426 10525 14590 12024 7258.4 5189.2 8404.1 8491.8 10474 13090 11964 11358 13311 10995 11213 11920 13107 10071 10876 10647 13901 11414 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2588100 22653 4133 21233 42615 34274 34274 1 9606 Homo sapiens 0.058671006315080376 RGAYGGGYGGYDDYNGYNDGYGFGSDR Unmodified 2872.1386 0.13857834 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;H0YB39;Q68DG4;H0YBD7 HNRNPH1;DKFZp686A15170 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 0 1 5 0 1 49.819 49.895 3 7.689E-39 13717 20230619_1885_Aki_TMTPro18x_K_F5 207.21 203.55 9560.2 8187.4 10771 13931 10787 8276.6 11821 14013 10088 18048 16852 16128 20843 16478 16621 23473 15728 19016 8851.9 7539.1 10855 13517 11191 8933.8 11820 14025 10684 17943 17140 16486 20930 17357 16966 23206 15079 18097 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48043000 22654 1427 21234 42616 34275;34276 34275 2 9606 Homo sapiens -0.22260540143815888 RGDACEGDSGGPFVMK Oxidation (M) 1697.7138 0.7137541 2771 CON__P00735;B4DDT3;E9PIT3;P00734;Q69EZ8 F2 Prothrombin;Activation peptide fragment 1;Activation peptide fragment 2;Thrombin light chain;Thrombin heavy chain yes no 0 1 1 4 0.816 1 1 1 40.078 40.141 3 7.6902E-10 9631 20230619_1882_Aki_TMTPro18x_K_F3 153.48 144.68 + 53927 43482 67692 76389 152700 177840 121130 126110 196020 305410 614600 991420 362260 472230 544030 353880 476380 711120 49966 40066 68994 75641 151220 170880 126480 137440 211720 319300 602560 955760 387150 497050 545330 378210 458070 670780 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 421790000 22655 2771 21235 42617;42618;42619 34277;34278;34279 34277 1651 3 9606 Homo sapiens -0.10719422838565151 RGDACEGDSGGPFVMK Unmodified 1681.7188 0.71883948 2771 CON__P00735;B4DDT3;E9PIT3;P00734;Q69EZ8 F2 Prothrombin;Activation peptide fragment 1;Activation peptide fragment 2;Thrombin light chain;Thrombin heavy chain yes no 0 0 1 4.5 0.5 1 1 44.17 44.232 3 2.6486E-14 11330 20230619_1883_Aki_TMTPro18x_K_F4 170.48 152.68 + 35147 33488 35061 48161 63925 81876 48241 51140 106590 297320 473870 815840 309370 399840 420620 319290 438990 669400 32532 30759 36152 47799 63912 79543 51588 61168 120130 302380 464110 788730 327000 421300 426300 342090 421440 631250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 458710000 22656 2771 21235 42620;42621 34280;34281 34280 2 9606 Homo sapiens -0.09475118975933583 RGDDSFGDK Unmodified 995.43084 0.4308376 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 1 2.5 0.5 1 1 35.086 35.143 3 0.00088729 7624 20230619_1882_Aki_TMTPro18x_K_F3 103.91 61.089 253690 107600 356910 333480 417670 429130 338990 417610 359110 292710 465900 521400 411410 371230 418520 161790 516180 449500 234670 100570 354670 319080 426380 425960 347440 423920 368560 309370 471030 513220 422080 376990 429330 182970 492470 424130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 486600000 22657 2578 21236 42622;42623 34282 34282 1 9606 Homo sapiens -0.0670605838965912 RGDDWNDREWDR Unmodified 1618.6873 0.68728007 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9 SRRT Serrate RNA effector molecule homolog yes no 0 0 2 2 0 1 36.711 36.769 4 1.1585E-17 8408 20230619_1881_Aki_TMTPro18x_K_F2 198.23 181.54 24933 17645 24004 22486 21154 25664 25456 24668 31137 23693 24537 22664 27281 19788 25269 20076 25049 25000 23028 16204 24412 22358 22342 25679 25593 25244 31114 23981 25594 22956 27637 20550 25688 20464 23968 23693 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31619000 22658 4464 21237 42624 34283 34283 1 9606 Homo sapiens -0.09731607623348282 RGDFFYHSENPK Unmodified 1495.6844 0.68442653 198 A0A024R2F9;Q9BTV4;A0A0S2Z5N2;Q8TEP9 TMEM43;FLJ00144 Transmembrane protein 43 yes no 0 0 1 7.5 0.5 1 1 39.759 39.786 4 0.023173 9227 20230619_1887_Aki_TMTPro18x_K_F7 62.088 46.332 37142 31239 40036 40091 47952 47869 47422 44561 54745 40577 50121 47511 47543 48593 44376 49742 50587 51474 34372 28669 40545 39863 49124 47749 48063 45656 55117 41474 51511 47987 48517 50110 45554 50056 48348 48869 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176660000 22659 198 21238 42625;42626 34284 34284 1 9606 Homo sapiens -0.043588310101995376 RGDFIPGLR Unmodified 1029.572 0.57196295 699 P08559-4;P08559-2;P08559;Q5JPU2;P08559-3;A0A024RBX9;Q53GE3;A5YPB6;A5PHJ9 PDHA1;PDHA1/LOC79064 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha yes no 0 0 1 2.5 0.5 1 1 43.978 44.054 3 0.0020257 11456 20230619_1882_Aki_TMTPro18x_K_F3 84.17 47.477 105650 82146 109040 120960 117910 136230 125370 134060 140160 127240 137730 137040 159270 124600 134010 148450 176230 168510 97686 75528 110700 119120 122020 136480 126470 136900 141840 129270 142350 138310 160640 130290 139120 149870 168150 159870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186850000 22660 699 21239 42627;42628 34285 34285 1 9606 Homo sapiens 0.05835984774262215 RGDFLIVDPIEEGEK Unmodified 1715.873 0.87301516 330 E9PLI6;E9PS76;A0A024R5B9;Q8N9N8;E9PNH5 EIF1AD;MGC11102 Probable RNA-binding protein EIF1AD yes no 0 0 1 3 0 1 57.117 57.149 3 2.2843E-05 17266 20230619_1882_Aki_TMTPro18x_K_F3 105.39 76.064 48594 38428 41467 41699 37087 43860 45219 45726 47801 53358 43784 49695 52958 45759 50682 59470 55434 63021 44870 35219 42654 41897 39125 44239 45214 46783 48448 53390 45567 50467 53664 48067 51890 59710 53045 59792 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34008000 22661 330 21240 42629 34286 34286 1 9606 Homo sapiens 0.043713570527870615 RGDIIGVQGNPGK Unmodified 1309.7102 0.71024735 3911 Q15046;Q15046-2;H3BVA8;J3KRL2;H3BPV7 KARS Lysine--tRNA ligase yes no 0 0 1 4.5 3.5 1 1 40.337 40.333 3 5.7814E-09 9608 20230619_1888_Aki_TMTPro18x_K_F8 168.76 129.49 381870 316970 361990 365700 457310 463260 423670 419010 488190 435170 499210 472490 497940 410720 447030 517210 529780 483920 352980 290600 370770 366670 466350 460200 431140 431500 494010 440200 511400 476160 505800 431310 460400 515990 505770 460150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 709700000 22662 3911 21241 42630;42631 34287;34288 34288 2 9606 Homo sapiens 0.06778063232081877 RGDINLLMLGDPGTAK Unmodified 1669.8821 0.88214006 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 1 1.5 0.5 1 1 56.914 56.922 3 8.2853E-15 17218 20230619_1880_Aki_TMTPro18x_K_F1 186.85 167.09 335480 267470 292020 313680 240570 360900 309570 322950 367050 413940 366840 362600 435290 359580 369350 435740 371190 388790 309830 245300 299730 313630 256750 360290 310030 334890 371020 411910 379330 370330 438840 375080 377220 433870 355260 369710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 128180000 22663 2188 21242 42632;42633 34289;34290;34291 34290 3 9606 Homo sapiens 0.07399427137420389 RGDINLLMLGDPGTAK Oxidation (M) 1685.8771 0.87705468 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 1 1 8 0 1 53.863 53.935 3 0.0095322 15243 20230619_1888_Aki_TMTPro18x_K_F8 77.13 62.157 87011 65195 88620 85516 78703 89024 85696 84491 102200 96235 100160 90943 103090 86839 89840 114750 113980 112400 80427 59873 89716 84747 82755 89643 86547 86954 103100 96494 102910 92501 104520 91200 93058 114650 108810 106790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309290000 22664 2188 21242 42634 34292 34292 1365 1 9606 Homo sapiens 0.06155123274811558 RGDIVFVDR Unmodified 1075.5774 0.57744226 191 A0A024R277;A0A8I5QKQ8;A0A8I5KUM4;Q6NUL7;O15269;Q59EQ4 SPTLC1 Serine palmitoyltransferase 1 yes no 0 0 1 6 0 1 40.592 40.684 3 0.00026603 9808 20230619_1886_Aki_TMTPro18x_K_F6 122.51 96.572 154920 108870 142460 141170 143040 156400 158530 157520 203320 156750 174350 153120 176740 148820 153210 180720 187930 192540 143030 99997 145750 140130 149030 157010 160320 160810 203270 158460 180180 155610 179220 155390 158270 181670 179510 182740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137590000 22665 191 21243 42635 34293 34293 1 9606 Homo sapiens 0.04267663566088231 RGDLAALLSGVR Unmodified 1226.7095 0.70951906 3395 P07101-3;P07101-4;P07101-2;P07101;P07101-6;P07101-5 TH Tyrosine 3-monooxygenase yes no 0 0 1 4 0 1 53.812 53.828 3 5.5709E-07 15740 20230619_1883_Aki_TMTPro18x_K_F4 152.16 115.58 122130 104010 115800 302340 90914 98403 118480 123700 157190 44316 43467 37994 42984 36594 81184 47744 53002 35361 112910 96707 118880 285630 97202 115230 119020 122980 153000 49031 49976 38917 45740 38369 80133 47222 50862 33782 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 458960000 22666 3395 21244 42636 34294 34294 1 9606 Homo sapiens 0.10523268583028766 RGDLPFVVPR Unmodified 1154.656 0.65602693 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 1 3.5 0.5 1 1 47.103 47.164 3 1.312E-05 12839 20230619_1882_Aki_TMTPro18x_K_F3 147.37 110.67 180170 148350 161100 161310 162890 167940 178240 188350 215750 225700 200070 197070 222970 183850 211440 232170 208320 229160 166460 135950 165240 162040 169470 169880 180030 191930 217210 225190 207010 200910 226250 192700 215160 232300 199490 217610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276670000 22667 148 21245 42637;42638 34295 34295 1 9606 Homo sapiens 0.08488515871181335 RGDTVATLSER Unmodified 1203.6208 0.62076364 3488 Q3B7A7;Q59HH3;P22102;B4DJ93 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 1 4.5 0.5 1 1 32.877 32.947 3 6.9579E-12 6678 20230619_1883_Aki_TMTPro18x_K_F4 194.29 139.68 280900 209210 258230 269670 326680 327630 292610 320470 375180 290260 337420 326140 352510 268400 311640 389550 385230 305310 259420 192100 265240 268130 332930 326780 299620 326970 375810 296190 348510 327820 357250 285130 322070 384590 367320 291170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 397900000 22668 3488 21246 42639;42640 34296;34297 34296 2 9606 Homo sapiens 0.027098085527313742 RGDTYELQVR Unmodified 1235.6258 0.62584901 811 Q96SP2;A0A8I5KUC4;A0A8I5KY62;A0A8I5QJM4;A0A8I5KYH1;A0A8I5QKX7;B4DH58;A0A087WU53;Q9H0U3 MAGT1 Magnesium transporter protein 1 yes no 0 0 1 5 0 1 36.024 36.116 3 0.00013912 7916 20230619_1885_Aki_TMTPro18x_K_F5 126.33 106.49 31462 27053 33995 33996 40154 46251 39759 37410 53813 46057 47983 50769 57237 44353 45623 53578 62454 53062 29120 24820 34420 33916 41241 45630 40533 39059 53787 46258 49915 51105 57563 46468 47563 53643 59527 50439 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119530000 22669 811 21247 42641 34298 34298 1 9606 Homo sapiens 0.01746112415321477 RGDYLGK Unmodified 807.4239 0.42390173 701 Q9NRF8;A0A024RC00 CTPS2 CTP synthase 2;CTP synthase yes no 0 0 1 8 0 1 36.779 36.765 3 0.0089288 8182 20230619_1888_Aki_TMTPro18x_K_F8 91.853 51.75 83339 54527 88459 95302 115520 108960 107120 95721 113180 91221 127770 134860 108040 104820 125000 63289 153420 135410 77004 50284 89864 92994 117450 108830 108670 98654 115420 93797 129630 133780 111800 106950 128010 68516 146390 127920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28742000 22670 701 21248 42642 34299 34299 1 9606 Homo sapiens 0.012486735204333854 RGEAHLAVNDFELAR Unmodified 1696.8645 0.86451616 3789 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 1 4.5 0.5 1 1 42.855 42.918 4 6.9301E-14 10726 20230619_1885_Aki_TMTPro18x_K_F5 138.39 107.43 205510 142260 205930 198440 177050 177380 191640 172320 226650 283090 232970 240890 275760 186060 259730 256990 264240 293120 189850 130780 208620 195510 186480 180910 193530 179430 229580 278770 240680 244420 278980 197840 264630 259110 252980 277920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1409300000 22671 3789 21249 42643;42644 34300;34301 34301 2 9606 Homo sapiens 0.043958479267757866 RGEAPFAQR Unmodified 1030.5308 0.53082642 172 K7EPV0;A0A024R1X4;Q9Y2R0 COA3;hCG_16955 Cytochrome c oxidase assembly factor 3 homolog, mitochondrial yes no 0 0 1 7 0.816 1 1 1 30.283 30.333 3 1.7967E-05 5783 20230619_1888_Aki_TMTPro18x_K_F8 144.65 101.53 83857 66957 73103 87721 119720 136180 118550 110670 159770 68875 94356 109010 70659 71302 118190 81802 108070 95254 77446 61475 75976 87460 120760 133390 120730 113720 157460 73248 99033 107560 75240 75275 118580 82912 103410 90377 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161010000 22672 172 21250 42645;42646;42647 34302 34302 1 9606 Homo sapiens 0.016782237348024864 RGEAQLLMNEFESAK Unmodified 1721.8407 0.84066917 3853 Q53GX4;Q2TA84;Q13451;B7Z8G2;B7Z7Z8;Q6ZR21 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes no 0 0 1 6 0.816 1 1 1 58.239 58.298 3 2.8914999999999997E-19 17401 20230619_1886_Aki_TMTPro18x_K_F6 213.69 173.48 311850 254870 301400 324190 227160 304030 289200 287520 312150 398580 351270 356820 396120 332900 360650 394320 363700 404020 288280 233910 306100 321430 243930 308480 288900 297910 318750 395470 360590 363190 401100 347540 367730 395730 348240 383490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 172010000 22673 3853 21251 42648;42649;42650 34303;34304 34304 2 9606 Homo sapiens 0.008622463780966427 RGECVLAK Unmodified 931.49094 0.49093544 2679 B7Z4J7;F5H039;B7Z2B5;Q9NQX3;Q9NQX3-2;B7Z374;B2RDJ7 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 1 8 0 1 36.217 36.204 3 0.0033799 7948 20230619_1888_Aki_TMTPro18x_K_F8 90.15 34.434 140880 92004 130340 136670 137230 113030 139330 134940 149560 100240 119690 97606 103930 81214 148030 83641 130570 88102 130020 84665 133370 134040 141770 116650 140690 135480 150410 103130 123480 98728 108610 84491 148410 84486 124810 83789 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56916000 22674 2679 21252 42651 34305 34305 1 9606 Homo sapiens 0.022449607398584703 RGEDMMHPLK Unmodified 1212.5743 0.57434749 409 A0A024R6S1;O60884;T2DN57;A0A087WT48 DNAJA2 DnaJ homolog subfamily A member 2 yes no 0 0 1 7 0 1 38.536 38.6 4 0.012123 8712 20230619_1887_Aki_TMTPro18x_K_F7 69.349 51.485 55027 47203 49069 48920 52826 59908 63171 55544 72724 57799 59549 54793 64961 48083 57427 77742 78064 63913 50851 43231 50408 49436 54884 59663 63353 57117 72977 58239 61921 55607 65757 51403 59774 76806 74394 60904 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29652000 22675 409 21253 42652 34306 34306 1 9606 Homo sapiens -0.023436708745748547 RGEEGHDPKEPEQLR Unmodified 1775.8551 0.85507368 1469 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;B4E036 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 0 0 2 2.5 0.5 1 1 30.511 30.591 5 2.2616E-09 5783 20230619_1882_Aki_TMTPro18x_K_F3 145.52 129.58 68322 45350 59203 70924 70969 78199 77160 75419 84919 85051 93228 87660 94225 72356 92783 79744 78892 71662 63031 41756 61153 69571 72973 78427 77673 77502 86408 85511 95280 88348 95978 75552 93531 79627 75567 68177 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 886160000 22676 1469 21254 42653;42654 34307;34308 34308 2 9606 Homo sapiens -0.001819651494088248 RGEIIAK Unmodified 785.47594 0.4759373 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;M0R019;M0R2T0;B4DEG4 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M yes no 0 0 1 5.33 3.09 1 1 1 36.229 36.247 3 0.0094731 7940 20230619_1888_Aki_TMTPro18x_K_F8 95.741 8.4188 1084100 606830 1037600 1146500 1618400 1577300 1405600 1417000 1725600 1015000 1443200 1479800 1486200 1174200 1269100 783030 1678800 1417600 1000100 560690 1067100 1118000 1628300 1558000 1438800 1447800 1726000 1062800 1495900 1470000 1505000 1201700 1313900 830460 1600500 1340600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1601899999.9999998 22677 3631 21255 42655;42656;42657 34309;34310 34310 2 9606 Homo sapiens 0.07461836934169241 RGEIIDNDTEEEFYLR Unmodified 1997.933 0.93304923 814 A0A087WUB9;Q8WYA6;Q8WYA6-3;Q8WYA6-2;Q8WYA6-4 CTNNBL1 Beta-catenin-like protein 1 yes no 0 0 1 1.5 0.5 1 1 51.085 51.107 3 2.0146E-64 14785 20230619_1880_Aki_TMTPro18x_K_F1 328.67 292.23 106590 89952 101680 100720 104020 121710 122630 104620 111350 125360 124480 118500 123240 108140 133260 144030 134500 142440 98541 82443 103750 101140 108370 121100 122200 108650 114670 125370 127060 120310 126310 113790 135460 144030 128730 135280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342660000 22678 814 21256 42658;42659 34311;34312 34311 2 9606 Homo sapiens -0.025999970746397594 RGEITIQEGWEGVK Unmodified 1600.8209 0.82092001 4334 Q96DA2 RAB39B Ras-related protein Rab-39B yes yes 0 0 1 6 0 1 50.063 50.14 3 0.00051064 14001 20230619_1886_Aki_TMTPro18x_K_F6 90.476 72.667 34720 27588 33774 36194 27433 37066 43192 37008 40009 37574 41876 42822 43559 37617 44718 45864 44730 45184 32091 25330 34325 35854 29454 37391 42526 37852 40991 38105 42974 43071 44460 39403 45459 45919 42800 42921 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18019000 22679 4334 21257 42660 34313 34313 1 9606 Homo sapiens 0.044542384296619275 RGELDDPEPR Unmodified 1182.5629 0.56291441 3210 O00418 EEF2K Eukaryotic elongation factor 2 kinase yes yes 0 0 1 1 0 1 31.401 31.401 3 0.0038232 6536 20230619_1880_Aki_TMTPro18x_K_F1 74.611 40.233 44887 34425 37333 37867 43863 41919 43118 43312 51893 45880 55669 58886 61190 48290 37156 60037 62400 56507 41431 31558 38644 38033 45005 42143 43795 44223 52501 46631 57164 58845 61129 50781 39722 59879 59419 53730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39235000 22680 3210 21258 42661 34314 34314 1 9606 Homo sapiens -0.02106453372721262 RGEPHVTR Unmodified 950.50461 0.50461167 1200 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;P67775;B3KUN1;A0A8V8TQA1;Q6I9T8;A0A8V8TRB3;B3KQ51;A0A8V8TQU8;P67775-2;H0YBN9 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes no 0 0 1 4.5 0.5 1 1 23.006 23.073 3 0.0013023 3780 20230619_1885_Aki_TMTPro18x_K_F5 107.21 57.079 88565 69612 101990 109680 131930 135630 115820 129500 109920 94535 126440 150910 114160 102820 130010 73001 147310 139500 81976 64055 102970 107750 134080 134990 117610 131770 112920 99087 128630 148850 117700 106110 132540 77756 140720 131820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76578000 22681 1200 21259 42662;42663 34315;34316 34316 2 9606 Homo sapiens 0.027379545633380076 RGEVPAELR Unmodified 1025.5618 0.56179219 3993 Q53FE8;Q9UNZ2;Q9UNZ2-5;Q53FF5;F2Z2K0;Q9UNZ2-6;Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 yes no 0 0 1 4.5 0.5 1 1 33.654 33.723 3 0.00032165 7008 20230619_1883_Aki_TMTPro18x_K_F4 120.06 68.066 78361 47260 65135 84530 84793 95649 105570 102620 133210 109510 113230 121550 133180 104600 96078 124520 125140 116790 72238 43614 67710 82372 87157 95962 106010 104530 133280 110710 118000 122260 133500 109530 100110 124310 119400 111040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63902000 22682 3993 21260 42664;42665 34317 34317 1 9606 Homo sapiens 0.05003377049024493 RGEYIYTGNAK Unmodified 1270.6306 0.63060004 563;3927 A0A024R9B5;B4DMM7;Q15291;B4DLF8;Q15291-2 RBBP5 Retinoblastoma-binding protein 5 no no 0 0 1 1 0 1 38.762 38.762 3 8.6097E-05 9561 20230619_1880_Aki_TMTPro18x_K_F1 107.97 79.748 55458 45908 59150 61730 67718 73071 57191 70241 78944 70386 71865 71177 79202 57392 66585 68282 92052 78688 51312 42156 59912 61181 69398 72955 58994 71910 78921 71157 74365 71749 79964 60300 69334 69019 87736 74677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80126000 22683 563;3927 21261 42666 34318 34318 1 9606 Homo sapiens 0.006109965580890275 RGFAFVTFDDHDSVDK Unmodified 1854.8537 0.8536767 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;A0A7I2YQX9;F8VZ49;Q32P51;A0A024QZ98;A0A2R8Y4L2;F8VTQ5;H0YH80;A0A7I2V5U9 HNRNPA1;HNRPA1;hCG_2020860;HNRNPA1L2;RP11-78J21.1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 1 6 0.816 1 1 1 51.77 51.845 4 2.778E-11 14694 20230619_1886_Aki_TMTPro18x_K_F6 162.26 132.12 167970 130070 153970 177200 137430 153080 155950 180110 171560 173490 140750 168860 177800 151340 129430 236330 229640 272620 155160 119480 157450 174750 144610 157210 156760 181930 172820 175490 147630 171100 178150 161280 138600 237750 219050 258390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209120000 22684 640 21262 42667;42668;42669 34319 34319 1 9606 Homo sapiens -0.03955599238179275 RGFAFVTFDDHDTVDK Unmodified 1868.8693 0.86932676 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;P51991-2;B4DDB6;B4E3E6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 1 5 0 1 52.118 52.192 4 5.805E-06 14720 20230619_1885_Aki_TMTPro18x_K_F5 113.69 88.366 113310 87545 92135 122140 100580 111000 104130 99684 107740 112900 116120 113840 123730 98914 109270 140550 135190 159760 104570 80443 95654 120280 103940 112820 104910 103040 109950 113410 119060 115090 125340 104800 112990 141520 129270 151450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142030000 22685 1469;2450 21263 42670 34320 34320 1 9606 Homo sapiens -0.030353127211355968 RGFCFITYTDEEPVK Unmodified 1860.8716 0.87163495 756;3227 A0A087WUK2;A0A024RDB5;O14979;B4DTA2;B4DGN3;O14979-2;O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 1 7.2 0.748 1 2 2 54.95 55.017 3;4 7.8498E-11 15749 20230619_1887_Aki_TMTPro18x_K_F7 162.93 126.53 222310 164650 208320 222530 174660 227350 226050 230370 251450 266000 238150 236330 273450 227470 216610 338870 260930 302810 205340 151270 212410 220020 185780 229480 225790 236070 254350 266000 246460 241150 275290 240830 224410 336320 249520 287840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1426600000 22686 756;3227 21264 42671;42672;42673;42674;42675 34321;34322;34323 34322 3 9606 Homo sapiens -0.024366003076920606 RGFCFITYTDEEPVKK Unmodified 1988.9666 0.96659797 756;3227 A0A087WUK2;A0A024RDB5;O14979;B4DTA2;B4DGN3;O14979-2;O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 2 1 0 1 51.901 51.901 4 5.4143E-08 15154 20230619_1880_Aki_TMTPro18x_K_F1 132.08 115.96 148880 156440 177510 201330 121540 139070 212980 178640 179710 219710 183030 185950 211870 132940 176560 168790 189690 183980 138130 143480 177300 198840 132930 146270 208380 181040 185300 218640 188940 188340 213310 141070 180830 169920 181330 174610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 479850000 22687 756;3227 21265 42676 34324 34324 1 9606 Homo sapiens 0.011673331634938222 RGFEGSCSQK Unmodified 1154.5139 0.51385572 2579 B4DRS4;O43719 HTATSF1 HIV Tat-specific factor 1 yes no 0 0 1 7.5 0.5 1 1 32.283 32.332 3 0.00012516 6445 20230619_1888_Aki_TMTPro18x_K_F8 137.78 110.66 76288 40175 84033 90063 120160 125560 108420 108870 108360 73889 100160 93407 105560 81795 96248 49039 123420 93534 70444 37239 85301 87205 121530 123790 109990 111420 109960 77206 103350 93521 107080 83126 99245 52465 117620 88477 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92296000 22688 2579 21266 42677;42678 34325;34326 34326 2 9606 Homo sapiens -0.057220649333203255 RGFEVVYMTEPIDEYCVQQLK Oxidation (M) 2619.2349 0.23491026 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 1 1 6.5 0.5 2 2 59.33 59.386 3;4 2.0069999999999998E-22 17875 20230619_1886_Aki_TMTPro18x_K_F6 179.95 159.06 300470 179870 235350 292700 205100 227840 240390 250140 259500 333420 346280 379320 368890 351010 278510 489930 383350 403140 276870 165780 244350 285290 216570 235710 241110 256360 267050 333740 352310 382210 371820 369990 291780 484600 365910 383760 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3128699999.9999995 22689 751 21267 42679;42680;42681;42682 34327;34328;34329;34330 34327 453 4 9606 Homo sapiens -0.00993780161752511 RGFEVVYMTEPIDEYCVQQLK Unmodified 2603.24 0.23999564 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 1 6.5 0.5 1 1 61.654 61.701 3;4 4.1627E-08 18965 20230619_1886_Aki_TMTPro18x_K_F6 110.6 101.89 369000 162650 257060 248250 190170 203070 211800 289670 292910 319800 339870 357950 368960 344570 200810 448090 415310 433770 339360 150060 269280 243170 203830 210690 215210 290550 295820 322600 347590 361410 368070 361160 220370 447040 395420 412080 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1300100000 22690 751 21267 42683;42684 34331;34332;34333 34332 3 9606 Homo sapiens 0.0025052370083358255 RGFFICDQPYEPVSPYSCK Unmodified 2349.0558 0.05582368 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 1 2 0 1 56.451 56.469 3 2.2391E-10 17166 20230619_1881_Aki_TMTPro18x_K_F2 133.9 119.44 26175 22426 26516 29180 23634 24014 23859 28558 24105 33089 31705 29450 34629 32410 34489 37859 30677 37499 24213 20583 26873 28849 24762 24786 24087 28974 24894 33067 32293 30180 35253 33615 34885 37929 29436 35595 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129700000 22691 3402 21268 42685 34334 34334 1 9606 Homo sapiens -0.06474199939248138 RGFGFGGFAISAGK Unmodified 1370.7095 0.70951906 4199 Q86XP3;J3QRI2;J3KTK9 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 0 1 7 0 1 55.476 55.537 3 1.3701E-06 15983 20230619_1887_Aki_TMTPro18x_K_F7 121.45 81.532 135350 104890 119370 132650 111520 139760 145090 140560 175910 86820 80817 58717 72329 53765 90673 79861 79312 46660 124990 96276 122590 131770 117570 140740 145210 142130 173360 89933 86920 60852 74949 57011 91182 78026 75769 44790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25909000 22692 4199 21269 42686 34335 34335 1 9606 Homo sapiens 0.038992685830407936 RGFGFVTFDDHDPVDK Unmodified 1850.8588 0.85876208 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28;A0A087WUI2;I6L957;A0A7I2V4N0 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 1 5.89 0.994 1 2 3 3 59.293 59.354 3;4 2.1174E-14 15024 20230619_1886_Aki_TMTPro18x_K_F6 175.26 137.23 1312000 1091400 1069700 1217600 966810 1177200 1150000 1226000 1362300 1332400 1319300 1482400 1697500 1653200 1021200 2255100 2034200 2274000 1211400 1000300 1106200 1219100 1019100 1194700 1155900 1252100 1374600 1345800 1372500 1505400 1691100 1730600 1113200 2253400 1938200 2158800 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 8375899999.999999 22693 3491 21270 42687;42688;42689;42690;42691;42692;42693;42694;42695 34336;34337;34338;34339 34338 4 9606 Homo sapiens -0.0326329537554102 RGFGFVYFQNHDAADK Unmodified 1870.8751 0.87508084 3836 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 1 2 0 1 49.242 49.301 4 8.6579E-15 14084 20230619_1881_Aki_TMTPro18x_K_F2 187.75 153.45 476460 365500 430160 412620 321610 424300 390440 354330 544010 490740 368590 480450 566400 468320 377310 621290 591800 643060 440040 335140 439100 413130 345460 426550 394420 370670 538850 488670 395650 487550 563080 491730 400180 622280 564510 610360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1122000000 22694 3836 21271 42696 34340 34340 1 9606 Homo sapiens -0.02552169418777339 RGFSDSGGGPPAK Unmodified 1231.5945 0.59454889 4506 Q9H307;A8K964;G3V5F0;G3V579 PNN Pinin yes no 0 0 1 7.5 0.5 1 1 35.807 35.838 3 6.6888E-05 7638 20230619_1887_Aki_TMTPro18x_K_F7 110.38 66.867 79463 64342 76023 84987 98163 86114 80506 91899 119000 77145 86868 89222 96382 81113 89744 91531 100210 86146 73446 59076 77860 84139 99645 87173 83395 93075 117670 79202 91065 89785 97771 84473 91953 91522 95681 81931 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 271700000 22695 4506 21272 42697;42698 34341;34342 34341 2 9606 Homo sapiens -0.01198460618752506 RGGADVNIR Unmodified 956.51518 0.51517635 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-4;B3KPV0 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 1 6 1.41 1 1 1 1 1 26.959 27.029 3 0.0003846 5163 20230619_1885_Aki_TMTPro18x_K_F5 108.67 43.831 281910 178160 287060 326420 347770 365940 348740 336590 389640 330470 401180 414970 368190 336220 379180 250440 453190 397500 260350 164440 292330 317680 356300 366170 352820 345840 394830 336980 409780 414430 377550 344960 388700 261750 432510 376190 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 545200000 22696 33 21273 42699;42700;42701;42702;42703 34343;34344;34345;34346 34344 4 9606 Homo sapiens 0.03517937217748113 RGGETDEFSNVR Unmodified 1365.6273 0.62730558 1648 A0A7I2YQS1;B7Z2A7;B7Z2R7;A0A7I2V560;A0A7I2YQD7;A0A7I2YQJ9;A0A7I2V5E1;A0A7I2V2Y9;A0A7I2V347;A0A7I2YQE9;A0A7I2V2M2;A0A7I2V5U2;Q8NCM9;A0A7I2V5L4;A0A7I2V556;A0A7I2V690;B7Z9D0;Q5T8D3-4;Q5T8D3-3;Q5T8D3;Q5T8D3-2 ACBD5;KIAA1996 Acyl-CoA-binding domain-containing protein 5 yes no 0 0 1 2.5 0.5 1 1 33.251 33.309 3 7.0229E-10 6983 20230619_1881_Aki_TMTPro18x_K_F2 182.07 140.79 26521 19839 24179 30689 37697 41276 40631 38290 48074 33863 35846 36891 42136 30502 37202 45837 50857 50902 24492 18254 25010 30214 38173 40847 40988 39203 48029 34580 37638 37127 42559 32520 38716 46063 48528 48293 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52096000 22697 1648 21274 42704;42705 34347;34348 34347 2 9606 Homo sapiens -0.04088298286592362 RGGETDEFSNVRR Unmodified 1521.7284 0.72841661 1648 A0A7I2YQS1;B7Z2A7;B7Z2R7;A0A7I2V560;A0A7I2YQD7;A0A7I2YQJ9;A0A7I2V5E1;A0A7I2V2Y9;A0A7I2V347;A0A7I2YQE9;A0A7I2V2M2;A0A7I2V5U2;Q8NCM9;A0A7I2V5L4;A0A7I2V556;A0A7I2V690;B7Z9D0;Q5T8D3-4;Q5T8D3-3;Q5T8D3;Q5T8D3-2 ACBD5;KIAA1996 Acyl-CoA-binding domain-containing protein 5 yes no 0 0 2 4 0 1 29.751 29.818 4 0.00060249 5513 20230619_1883_Aki_TMTPro18x_K_F4 94.09 74.251 20045 11855 20248 19077 29848 23150 26797 28777 26721 21079 22277 22975 22951 16867 20713 22704 27605 21070 18504 10925 20680 18728 30075 23241 27193 28789 27043 21766 23102 23038 23289 17916 21490 22625 26300 20054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11621000 22698 1648 21275 42706 34349 34349 1 9606 Homo sapiens -0.011578465838965712 RGGFEEPVLLK Unmodified 1243.6925 0.69247202 4733 Q9Y3Z3;Q9Y3Z3-4;Q9Y3Z3-3;A0A2R8YCS7;A0A2R8YD90;A0A2R8Y7R5;A0A2R8Y755;A0A2R8Y586;A0A2R8YG48;A0A804HL67;A0A2R8YF51;A0A2R8Y5D2;Q59H15 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes no 0 0 1 7 0 1 49.55 49.634 3 0.00086205 13392 20230619_1887_Aki_TMTPro18x_K_F7 93.345 34.367 114880 101080 105410 136790 115210 146420 141000 131480 151280 149820 147790 155160 168690 139090 145100 173750 169280 170220 106200 92806 108250 135250 119750 146920 140950 135900 153440 150610 152760 156730 170380 145860 149450 173760 161740 161710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113560000 22699 4733 21276 42707 34350 34350 1 9606 Homo sapiens 0.0803734797721063 RGGFNTFR Unmodified 953.48315 0.48314794 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 1 5 0.816 1 1 1 33.775 33.835 3 0.0034415 7167 20230619_1886_Aki_TMTPro18x_K_F6 98.582 55.336 394370 310590 335250 361360 419630 511910 439360 417240 572610 172820 174160 140190 159510 131260 210690 164430 198340 123400 364120 284840 347000 362700 430470 503870 445510 426270 558590 187640 196690 143850 165880 137430 212370 162590 189370 117910 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 370170000 22700 3137 21277 42708;42709;42710 34351;34352;34353 34353 3 9606 Homo sapiens 0.004545695346223511 RGGGGGFGYQK Unmodified 1082.5257 0.52574104 4606 Q9NVP1;Q4ZG72;Q8N254 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 0 1 4 0 1 35.871 35.919 3 0.00054175 7914 20230619_1883_Aki_TMTPro18x_K_F4 96.034 68.292 146890 115630 125980 139930 169340 190940 161580 162190 217650 135940 139400 128700 137790 121690 136130 152080 171500 128540 135640 106080 130460 139960 172440 188530 165000 166940 215200 138780 146570 130860 140730 127310 140480 150990 163450 122500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141250000 22701 4606 21278 42711 34354 34354 1 9606 Homo sapiens -0.012220801278090221 RGGGGTELGPPAPPRPR Unmodified 1670.8965 0.89648499 2077 A8K5Q1;Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme yes no 0 0 2 3 0 1 32.677 32.748 4 4.4379E-10 6612 20230619_1882_Aki_TMTPro18x_K_F3 144.33 103.05 20952 16752 24182 22134 26911 25468 29644 26900 29582 22640 26518 28753 28144 21411 27415 24686 31238 28502 19396 15382 24324 21962 27758 25540 29722 27276 29994 23299 27446 28659 28626 22514 28084 24978 29832 27041 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43093000 22702 2077 21279 42712 34355 34355 1 9606 Homo sapiens 0.08787260400595187 RGGGVGVGGGGTGVGGGDRDR Unmodified 1798.8783 0.87826874 19 A0A024QZ09;Q96G74-3;Q96G74-5;Q96G74 OTUD5 OTU domain-containing protein 5 yes no 0 0 2 8 0 1 27.361 27.391 4 0.047269 4761 20230619_1888_Aki_TMTPro18x_K_F8 44.089 30.426 1478.8 0 0 1293.1 1274.5 1821.8 2608.8 0 2409.8 1624.4 1440.3 2693.5 1432.8 1273.3 1792.2 2807.2 2736 1782 1347.6 0 0 1198.8 1264.2 1756.8 2534.9 0 2424.3 1591.3 1533.1 2633.7 1482.4 1437.9 1873.5 2735.8 2602.1 1706.9 1 0 0 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1155400 22703 19 21280 42713 34356 34356 1 9606 Homo sapiens 0.010784736879259071 RGGHQNNYKPY Unmodified 1332.6323 0.63233138 4406 Q99729-3;D6R9P3;D6RD18;B4DMY3;D6RBZ0;Q53F64;Q99729-2;Q99729-4;Q99729 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 2 2.5 0.5 1 1 30.537 30.617 4 0.0003845 5810 20230619_1882_Aki_TMTPro18x_K_F3 109.66 86.519 102650 81433 100440 106250 121220 147250 128210 125370 158250 54219 53804 39294 47452 38130 76590 48174 63230 34656 94884 74765 102600 105770 124600 145210 129690 127680 155010 58373 59810 40644 50050 39905 76462 47594 60429 33164 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129820000 22704 4406 21281 42714;42715 34357;34358 34358 2 9606 Homo sapiens -0.020679496333059433 RGGNRFEPYANPTK Unmodified 1605.8012 0.80118762 3631 P52272-2;P52272;A0A087X0X3;M0R019;M0R2T0;B4DEG4;M0R0N3;M0QYQ7;M0R0Y6 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 2 3.5 0.5 1 1 36.031 36.081 4 1.8598E-05 7953 20230619_1883_Aki_TMTPro18x_K_F4 117.2 92.274 117220 113260 109520 111960 137360 114560 131340 135810 132440 133290 128010 109280 136140 106890 118910 154620 147210 114280 108450 103640 112290 113320 140010 116300 132830 137170 134770 134080 131780 112100 137840 112860 122970 152260 140350 109090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1006599999.9999999 22705 3631 21282 42716;42717 34359 34359 1 9606 Homo sapiens 0.022519072095519732 RGGPAGPYQQSQR Unmodified 1400.6909 0.69090889 3078 H3BTB7;Q5JPH6;Q5JPH6-2 EARS2 Probable glutamate--tRNA ligase, mitochondrial yes no 0 0 1 1 0 1 27.159 27.159 3 0.0036711 4910 20230619_1880_Aki_TMTPro18x_K_F1 70.622 49.064 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22706 3078 21283 42718 34360 34360 1 9606 Homo sapiens 0.0065910694117974344 RGGPISFSSSR Unmodified 1149.5891 0.58906958 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 1 5 0.816 1 1 1 34.853 34.917 3 0.000339 7516 20230619_1885_Aki_TMTPro18x_K_F5 105.65 75.085 61237 61178 54148 44491 71725 88845 68542 63970 95332 13917 14423 15960 16916 15463 26276 14623 20688 16293 56648 55859 55818 46958 73169 85926 70034 65713 92114 16997 18748 16133 17678 15919 26178 14843 19818 15473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44889000 22707 3549 21284 42719;42720;42721 34361 34361 1 9606 Homo sapiens 0.020258605894241555 RGGPNYQEGLR Unmodified 1245.6214 0.62143234 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;K7EIE7 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 1 6.5 1.12 1 1 1 1 31.093 31.148 3 2.5939E-12 6016 20230619_1888_Aki_TMTPro18x_K_F8 199.19 142.63 160690 132180 152500 148210 135360 143440 148810 149530 167440 188320 223700 213850 224340 190880 179030 232580 233260 193400 148530 121160 155280 148390 142300 145630 149960 153400 171800 188970 226760 215260 226800 199770 186120 230730 222380 184250 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2161800000 22708 161 21285 42722;42723;42724;42725 34362;34363;34364;34365 34365 4 9606 Homo sapiens 0.008446479924032246 RGGPPFAFVEFEDPRDAEDAVYGR Unmodified 2696.2619 0.26192836 3140 J3KTL2;Q07955;Q59FA2;Q07955-3;Q07955-2 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 2 5 0.816 1 1 1 59.8 59.839 4 6.1098E-13 17747 20230619_1885_Aki_TMTPro18x_K_F5 121.38 113.19 65316 58813 70849 69541 65820 75387 74255 68570 80851 82040 86353 86994 94687 78600 90460 99320 88028 104550 60476 53918 71431 69440 68996 75640 74601 70907 82233 82350 88723 87831 96149 82469 91982 99738 84362 99190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 206660000 22709 3140 21286 42726;42727;42728 34366;34367 34366 2 9606 Homo sapiens -0.018352122347550903 RGGPPGPPISR Unmodified 1089.6043 0.60432571 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C044;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 1 4 0 1 31.123 31.187 3 0.0011114 6011 20230619_1883_Aki_TMTPro18x_K_F4 117.09 96.762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22710 1676;2901 21287 42729 34368 34368 1 9606 Homo sapiens 0.06310772177266699 RGGSGSHNWGTVK Unmodified 1341.6538 0.6537951 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 1 6 0 1 31.703 31.737 4 0.0062771 6406 20230619_1886_Aki_TMTPro18x_K_F6 70.68 51.285 29626 20597 22753 24246 27462 43002 29140 30727 52798 21671 24414 20167 22557 24041 24128 24207 33742 22633 27316 18901 23782 24421 28366 41738 29984 31976 51202 22431 26270 20705 23218 24658 25033 24241 32114 21554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13085000 22711 4246 21288 42730 34369 34369 1 9606 Homo sapiens -0.0033656460459496884 RGGTMETDDHMGGIPAR Oxidation (M) 1815.7992 0.79921506 1909 A2A3N6;B4DY52;P78517;A6PW57;Q99755-2;Q99755-3;Q99755 PIPSL;PIP5K1A Putative PIP5K1A and PSMD4-like protein;Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha yes no 0 1 1 3 0 1 29.779 29.872 4 0.018743 5545 20230619_1882_Aki_TMTPro18x_K_F3 63.145 59.907 8058 6725.8 9836.1 7890.5 10120 9042.4 10119 9881.8 9737.8 9742.1 10254 12541 10117 10429 9928.6 9227.5 13634 13520 7465.6 6167.3 9833.8 7895.8 10464 9082.4 10195 10034 9965.8 9935.1 10508 12520 10338 10761 10299 9535.5 13009 12797 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5987400 22712 1909 21289 42731 34370 34370 1226 1 9606 Homo sapiens -0.07605257652903674 RGHREEEQEDLTK Unmodified 1625.7758 0.77576073 645 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 0 0 2 2 0 1 28.044 28.118 4 0.032365 4984 20230619_1881_Aki_TMTPro18x_K_F2 59.898 31.601 6914.9 703.73 4972.3 5140.2 7337.2 2585.8 6062.9 5431.6 7770.8 6164.8 8413.1 6802 8204.9 7211.8 3755.6 9643 5765.1 9231.2 6344.2 694.64 5241.5 4787.5 7363.8 2880.1 6237.9 5376.2 7838.6 6213.1 8572.8 6905.1 8170.9 7552.4 4043 9609.2 5520.6 8759.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22182000 22713 645 21290 42732 34371 34371 1 9606 Homo sapiens -0.01209612103548352 RGHVFEESQVAGTPMFVVK Oxidation (M) 2133.0677 0.067708995 3447 P13639;Q8TA90;B4DPU3 EEF2 Elongation factor 2 yes no 0 1 1 1 0 1 47.429 47.429 4 1.1473E-14 13295 20230619_1880_Aki_TMTPro18x_K_F1 163.35 152.09 70644 8722.4 46002 63140 58124 60380 54785 64298 107540 71594 71610 76352 83827 70293 36598 99836 74409 87100 64788 8563 49052 59116 59476 61244 57034 65596 105040 72198 75627 77135 82970 74252 40492 98938 70916 82816 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 264980000 22714 3447 21291 42733 34372 34372 2087 1 9606 Homo sapiens 0.04649784866205664 RGHVFEESQVAGTPMFVVK Unmodified 2117.0728 0.072794373 3447 P13639;Q8TA90;B4DPU3 EEF2 Elongation factor 2 yes no 0 0 1 2 0 1 50.77 50.821 4 2.1829E-19 14800 20230619_1881_Aki_TMTPro18x_K_F2 177.56 161.43 157500 23012 103060 135390 101860 126950 122780 132090 230720 162960 148810 165300 193150 161620 81495 213880 162710 205350 144480 22277 109410 127110 106950 128850 125830 135410 225510 163310 158370 167610 190520 169610 90069 213190 155190 194980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 437670000 22715 3447 21291 42734 34373 34373 1 9606 Homo sapiens 0.05894088728837232 RGIPGLPDGR Unmodified 1036.5778 0.57777661 2980 F8VPD4;P27708;Q53SY7;H7BZB3 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 1 1.5 0.5 1 1 39.928 39.963 3 0.00059463 9724 20230619_1881_Aki_TMTPro18x_K_F2 101.39 81.632 170960 133720 166350 169040 200630 211660 190930 196130 229590 209700 240860 212550 251240 195200 224150 241730 236990 233690 158000 122730 169890 168370 205410 210450 194300 201750 232110 211350 246830 215240 254660 204470 229210 241680 226610 222060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172450000 22716 2980 21292 42735;42736 34374 34374 1 9606 Homo sapiens 0.06095083285936198 RGIPNYEFK Unmodified 1122.5822 0.58219329 4010 Q541A5;Q92890;Q92890-1;B7Z9N3;B4E3I3;Q92890-3 ufd1;UFD1L Ubiquitin fusion degradation protein 1 homolog yes no 0 0 1 2 0 1 44.558 44.641 3 0.0027795 12001 20230619_1881_Aki_TMTPro18x_K_F2 87.895 60.153 229610 152550 212680 250100 251340 271740 281430 266760 227910 265110 313260 331320 283250 266170 268710 297920 370230 324550 211930 140540 218290 244660 258610 272890 280400 272920 238690 269870 316250 331110 289600 278250 279240 300300 352940 308140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 328870000 22717 4010 21293 42737 34375 34375 1 9606 Homo sapiens 0.02580547708839731 RGISSSNEGVEEPSK Unmodified 1574.7536 0.7536283 4624 Q9NXV6 CDKN2AIP CDKN2A-interacting protein yes yes 0 0 1 3.5 0.5 1 1 36.177 36.227 3 2.6739E-05 8048 20230619_1882_Aki_TMTPro18x_K_F3 102.65 71.26 21678 19312 25753 25576 37727 27934 27748 28905 36777 28636 34104 37575 40133 29828 30019 40927 43033 42004 20087 17726 25980 25348 37867 28125 28838 29456 36840 29238 35390 37491 40274 31625 31480 40974 41041 39888 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33316000 22718 4624 21294 42738;42739 34376 34376 1 9606 Homo sapiens -0.010758365719311769 RGITNLCVIGGDGSLTGADTFR Unmodified 2279.1328 0.13282845 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;F8VZQ1;F8VX13 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 1 2 0 1 55.533 55.554 3 0.0017882 16806 20230619_1881_Aki_TMTPro18x_K_F2 69.72 58.615 37228 24220 28593 23496 24398 32266 31761 37366 37135 31450 33458 39708 39701 55222 45332 41229 70411 67382 34314 22195 29677 23942 25943 32073 31781 37632 37363 32380 34841 40458 40777 55657 47351 43135 67105 63734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159190000 22719 116 21295 42740 34377 34377 1 9606 Homo sapiens 0.04442734601434495 RGIVSAQDASLQER Unmodified 1528.7958 0.79576789 13 A0A024QYV8;B4DTZ1;O43303-2;O43303 CP110;CCP110 Centriolar coiled-coil protein of 110 kDa yes no 0 0 1 6 0 1 37.156 37.224 3 8.1882E-07 8434 20230619_1886_Aki_TMTPro18x_K_F6 142.54 111.71 17982 14774 17096 24368 20965 25319 21666 21881 25851 21065 23271 22800 22043 19304 20062 22651 24970 23024 16621 13600 17546 23804 21514 25432 21930 22577 25980 21397 23938 22954 22452 20202 20719 22724 23830 21871 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19332000 22720 13 21296 42741 34378 34378 1 9606 Homo sapiens 0.052521836270670974 RGLALALFGGEPK Unmodified 1327.7612 0.76122028 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 1 5 0 1 56.782 56.844 3 2.4603E-06 16607 20230619_1885_Aki_TMTPro18x_K_F5 137.58 75.031 81911 49060 54136 72795 46361 69021 57946 62867 117360 117910 122230 152090 167250 151720 75002 196840 182140 228050 75402 45164 57311 71458 49428 69882 59592 66140 116430 117320 127190 152850 165070 158900 84492 198410 173550 216100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223970000 22721 2702 21297 42742 34379 34379 1 9606 Homo sapiens 0.11045012276917987 RGLALDGK Unmodified 828.48175 0.48175096 2004 P49407;P49407-2;A8K103;H0YET9;P32121-4;A8K4I6;P32121-3;P32121;P32121-2;P32121-5;Q59EM5;K7EL17;Q68DZ5;P36575;P36575-2 ARRB1;ARRB2;DKFZp686L0365;ARR3 Beta-arrestin-1;Beta-arrestin-2;Arrestin-C yes no 0 0 1 2 0 1 38.882 38.949 3 0.017501 9332 20230619_1881_Aki_TMTPro18x_K_F2 70.552 0 231420 166470 182060 181120 162940 188420 196790 195760 252280 238640 260170 243060 255120 206790 226500 304170 296180 244040 213450 152630 188750 181930 171950 190200 198210 200620 254100 239040 266180 245520 259190 219600 235090 300510 282350 232620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71180000 22722 2004 21298 42743 34380 34380 1 9606 Homo sapiens 0.06064935445840547 RGLAPQNKPELQK Unmodified 1477.8365 0.83651049 1283 C9J3Q3;C9J6N5;C9JQ40;C9JW51;A0A1C7CYX8;Q9H098;C9JYP1;C9J6Y8;X6RET8;C9JP05;Q9H098-2 FAM107B Protein FAM107B yes no 0 0 2 3 0 1 39.999 40.055 3 0.088637 9650 20230619_1882_Aki_TMTPro18x_K_F3 53.557 31.926 29281 23512 26810 31825 32209 33975 32199 33304 34001 44178 49697 45770 47596 47887 39583 49890 49834 51004 27053 21594 27550 31474 33019 34178 32539 34357 35197 44102 50122 46482 48313 49402 41015 50141 47590 48428 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52157000 22723 1283 21299 42744 34381 34381 1 9606 Homo sapiens 0.11670569737361802 RGLDDDRGPWR Unmodified 1341.6538 0.6537951 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 2 5.5 0.5 1 1 34.856 34.926 4 7.6921E-09 7511 20230619_1885_Aki_TMTPro18x_K_F5 156.14 139.2 101620 87885 101150 103080 101630 108770 108350 113410 123190 126150 116060 117030 137760 104800 116540 139910 139600 130140 93993 80576 102810 102960 105690 109690 109350 115860 124460 126510 120370 118830 138850 110420 120270 139420 133280 123750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135330000 22724 3152 21300 42745;42746 34382;34383 34382 2 9606 Homo sapiens -0.0033656460459496884 RGLDVNK Unmodified 800.45045 0.45045083 676 Q9ULV4-3;Q9ULV4-2;Q9ULV4;Q59EA2;A0A024RBI5;B3KN06;Q53G58;B4DMH3;B4E3S0;B7Z9V0;H0YHL7 CORO1C Coronin-1C;Coronin yes no 0 0 1 7.5 0.5 1 1 35.458 35.488 3 0.01132 7677 20230619_1888_Aki_TMTPro18x_K_F8 98.629 21.855 528420 250420 663070 651070 870570 890080 701730 839360 750260 424160 629820 524170 437530 379780 755570 216660 602760 338650 488360 232940 665280 626970 882370 879930 719290 849380 755490 454270 643360 522870 467680 387950 751150 229080 576360 321330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 289750000 22725 676 21301 42747;42748 34384 34384 1 9606 Homo sapiens 0.04224362411753191 RGLESDVAELR Unmodified 1243.6521 0.65206377 1473 Q03252;A0A384NPH0 LMNB2 Lamin-B2 yes no 0 0 1 3 0 1 41.769 41.831 3 3.1529E-05 10350 20230619_1882_Aki_TMTPro18x_K_F3 132.59 71.152 223480 155290 162350 194150 151940 199070 204810 226720 273760 245080 265280 270580 265520 256280 205450 308880 277640 307590 205980 142590 170090 192950 160590 201470 205590 230120 274500 247530 272520 273160 268420 267460 214550 309160 265150 292060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 541160000 22726 1473 21302 42749 34385 34385 1 9606 Homo sapiens 0.039983815868026795 RGLFTGLTPR Unmodified 1116.6404 0.64037687 3996 Q53G34;Q9Y6C9;E9PIE4 MTCH2 Mitochondrial carrier homolog 2 yes no 0 0 1 8 0 1 45.166 45.194 3 0.032543 11558 20230619_1888_Aki_TMTPro18x_K_F8 57.003 31.39 49187 48616 51186 53204 61668 72400 62229 69897 79041 36688 36079 29980 31978 29328 39660 44304 35661 30839 45556 44524 52011 53624 63293 71685 63213 70650 77725 38731 38836 30797 33168 31040 39999 43516 34125 29452 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34380000 22727 3996 21303 42750 34386 34386 1 9606 Homo sapiens 0.08672229354124283 RGLGAGAGAGEESPATSLPR Unmodified 1852.9391 0.93913766 3235 O15173;O15173-2 PGRMC2 Membrane-associated progesterone receptor component 2 yes no 0 0 1 6.5 0.5 1 1 39.49 39.566 3 9.1694E-46 9296 20230619_1886_Aki_TMTPro18x_K_F6 265.16 240.93 58919 47122 54074 60501 58700 63966 60219 61977 74384 63262 71691 73364 71205 68333 74508 69919 83883 92482 54436 43255 55439 60037 60673 64374 61077 63495 74831 64202 73687 73849 72910 70737 76199 71513 80228 87569 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 237220000 22728 3235 21304 42751;42752 34387;34388 34387 2 9606 Homo sapiens 0.04678565947529023 RGLNVDQLNMLGEK Unmodified 1585.8246 0.82462518 1598 P42224;P42224-2;A0A669KB53;A0A669KBA4;A0A669KB56;A0A669KB68;A0A8V8TN81;A0A669KBI6;J3KPM9;A0A669KB52;A0A669KB75 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription yes no 0 0 1 1 0 1 52.873 52.873 3 3.6813E-05 15542 20230619_1880_Aki_TMTPro18x_K_F1 99.481 66.957 37460 24895 30647 37811 27782 36404 37175 35473 45684 44103 42762 47610 46414 37781 39117 49848 46025 56976 34545 22914 31708 37081 29410 36869 37194 36550 45944 44218 44197 47825 46904 39954 40350 50259 44045 54000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78091000 22729 1598 21305 42753 34389 34389 1 9606 Homo sapiens 0.05514584931847821 RGLQQITGHGGLR Unmodified 1391.7746 0.77457894 4003 Q53HG1;Q9UI09;A0A804HJF8;A0A804HK60;F8VRD8;A0A804HHX9;H0YID5;Q9UI09-2;F8VXI1 NDUFA12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes no 0 0 1 6 0 1 34.345 34.391 4 0.00015995 7388 20230619_1886_Aki_TMTPro18x_K_F6 97.957 77.495 44383 36300 44034 44060 57671 64029 54706 54960 66369 38512 37597 42676 50035 39864 33158 48969 53731 46401 41037 33299 44970 44119 58763 63013 55665 56320 65747 39993 40491 43058 49890 41701 35232 48873 51160 44126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53923000 22730 4003 21306 42754 34390 34390 1 9606 Homo sapiens 0.09436263108887033 RGLQTEAQVEK Unmodified 1257.6677 0.66771383 4647 Q9P2B4;B1AMN7 CTTNBP2NL CTTNBP2 N-terminal-like protein yes no 0 0 1 5.5 0.5 1 1 36.694 36.774 3 0.0029084 8210 20230619_1885_Aki_TMTPro18x_K_F5 76.165 48.734 77315 57977 75488 70051 81741 88583 85249 81945 111870 96409 117860 118100 105550 92361 95977 108840 138870 120370 71439 53200 76896 70018 84537 88026 86574 84561 112610 97351 120080 118040 107730 96981 100190 109720 132330 114270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105830000 22731 4647 21307 42755;42756 34391;34392 34391 2 9606 Homo sapiens 0.049186681038463576 RGMDDDRGPR Unmodified 1173.5309 0.53090277 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 2 2.5 0.5 1 1 22.99 23.101 3 0.00040757 3756 20230619_1882_Aki_TMTPro18x_K_F3 103.42 64.852 176640 107900 159210 185530 227150 206550 200760 209840 253150 218720 245960 224400 266120 207700 208460 231150 288060 237510 162940 99510 164310 181120 229630 207340 205550 214340 254600 220820 253350 227080 268170 216150 217470 232220 274500 225710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 316890000 22732 3152 21308 42757;42758 34393;34394 34394 2 9606 Homo sapiens -0.04892144327504866 RGMDDDRGPR Oxidation (M) 1189.5258 0.52581739 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 1 2 3 0 1 22.918 23.07 3 0.0027632 3724 20230619_1882_Aki_TMTPro18x_K_F3 82.417 54.212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22733 3152 21308 42759 34395 34395 1836 1 9606 Homo sapiens -0.06136448190136434 RGNGLIK Unmodified 756.46062 0.46062159 3200 M0R210;P62249;M0R3H0;M0R1M5;Q6IPX4;B4DP32 RPS16 40S ribosomal protein S16 yes no 0 0 1 4 0 1 34.643 34.693 3 0.0084018 7423 20230619_1883_Aki_TMTPro18x_K_F4 97.602 85.754 163150 93984 163420 181100 217260 234940 184050 225740 259730 184030 216050 203980 202740 153720 187550 124660 243280 211700 150590 86850 166890 176260 220620 233100 189900 229980 258330 188920 223020 204380 206550 158920 193670 130820 232020 200270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67993000 22734 3200 21309 42760 34396 34396 1 9606 Homo sapiens 0.07264970136998272 RGNIQEIQTR Unmodified 1213.6527 0.65273247 626 A0A024RAJ7;A0A024RAK1;Q969S9-4;Q969S9-2;Q969S9-3;Q969S9 GFM2 Ribosome-releasing factor 2, mitochondrial yes no 0 0 1 7 0.816 1 1 1 30.792 30.84 3 2.2361E-05 5641 20230619_1887_Aki_TMTPro18x_K_F7 125.72 88.873 40019 30262 35510 41780 51537 47626 52024 48078 61557 39507 46470 54831 49531 39692 44414 43907 55333 45310 36952 27806 36723 41309 52222 47738 52680 48875 61498 40884 48578 54430 50213 41662 45846 44144 52768 43057 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30408000 22735 626 21310 42761;42762;42763 34397;34398 34397 2 9606 Homo sapiens 0.054452210265026224 RGNLNFTCDGNSVISPVGNR Unmodified 2176.0443 0.044347791 3924 Q15269;C9J544 PWP2 Periodic tryptophan protein 2 homolog yes no 0 0 1 3 0 1 46.889 46.968 3 2.509E-12 12774 20230619_1882_Aki_TMTPro18x_K_F3 144.33 136.34 23038 20099 19988 25004 27981 29452 25196 27076 29716 28329 31591 27455 27861 22928 30063 26413 27937 31198 21288 18438 20707 24898 28359 29393 25709 27850 30090 28538 32138 27768 28646 23999 30395 26766 26773 29570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43929000 22736 3924 21311 42764 34399 34399 1 9606 Homo sapiens 0.0033673908164928434 RGNSQYPGAK Unmodified 1076.5363 0.53630573 1633 A0A6Q8PGB0;P24928;P24928-2 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 1 2.5 0.5 1 1 30.589 30.668 3 0.02618 5875 20230619_1882_Aki_TMTPro18x_K_F3 60.518 13.321 15310 10077 15345 20862 29827 28410 22450 27454 29555 18376 28415 28001 19824 18954 27726 12124 26110 31496 14140 9316.5 15832 20251 29613 28119 23284 27854 29610 19361 28839 27670 20891 19505 27880 13426 25034 29690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11042000 22737 1633 21312 42765;42766 34400 34400 1 9606 Homo sapiens 0.0010990252660576516 RGPAEESSSWR Unmodified 1260.5847 0.58471248 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 5 0.816 1 1 1 31.442 31.5 3 1.7764E-06 6057 20230619_1883_Aki_TMTPro18x_K_F4 134.49 103.42 35632 31428 37906 36972 49027 45380 39960 43359 56038 42733 50730 45929 46771 36810 41825 38049 47724 40462 32981 28813 38464 37004 49756 45231 41322 44402 55925 43343 52080 46177 47608 38352 42918 38371 45554 38432 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 313020000 22738 3152 21313 42767;42768;42769 34401;34402 34401 2 9606 Homo sapiens -0.03515648624147616 RGPAPQDQAGPGGAPR Unmodified 1530.7651 0.76513646 1071 K7EQQ1;A0A0S2Z3H2;A0A0S2Z3H6;O96005-4;O96005 CLPTM1 Cleft lip and palate transmembrane protein 1 yes no 0 0 1 5.5 0.5 1 1 28.599 28.652 3 4.8119E-11 5291 20230619_1886_Aki_TMTPro18x_K_F6 137.61 107.87 11608 5857.8 10295 10365 12662 15687 10898 14194 18001 11659 14139 13028 15726 10215 13484 15415 14828 15634 10698 5410.3 10603 10160 12950 15409 11315 14521 17762 11972 14745 13085 15874 10919 13836 15411 14180 14844 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21686000 22739 1071 21314 42770;42771 34403;34404 34404 2 9606 Homo sapiens 0.0209845003269038 RGPDAVAAPPGGTER Unmodified 1449.7324 0.73243935 3417 P08913 ADRA2A Alpha-2A adrenergic receptor yes yes 0 0 1 4 0 1 31.785 31.846 3 0.070829 6266 20230619_1883_Aki_TMTPro18x_K_F4 41.412 24.387 12947 7714.6 9448 13611 14087 16662 14226 13754 19983 11131 13879 13543 14631 12344 14128 10760 18919 17845 11925 7118.4 9986.4 13281 14298 16536 14500 14186 19756 11486 14557 13599 14892 12701 14619 11245 18047 16878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8391500 22740 3417 21315 42772 34405 34405 1 9606 Homo sapiens 0.02556242909804496 RGPEVTSQGVQTSSPACK Unmodified 1887.9109 0.910874 2986 F8W0B5;A0A2R8Y7P6;V9GY86;Q2M2R5;F8WB06;F8VQP2;A0A2R8Y5A6;A0A2R8YDM9;Q99700;A0A2R8Y7E6;H0YH87;A0A5F9ZHX3;A0A5F9ZHW5;Q99700-5;Q99700-2;Q99700-4;A0A5F9ZI57;A0A5F9ZHH4;F8WB05 ATXN2 Ataxin-2 yes no 0 0 1 8 0 1 37.196 37.182 3 1.8577E-14 8330 20230619_1888_Aki_TMTPro18x_K_F8 167.19 148.11 47899 34924 38650 44920 35772 40005 46131 44360 45341 50894 50594 53923 64150 45904 41776 66827 60640 52786 44190 32070 40029 44478 37677 40925 45894 45210 46483 51155 52256 54353 63935 48735 44050 65958 57783 50314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82358000 22741 2986 21316 42773 34406 34406 1 9606 Homo sapiens 0.0024349997593162698 RGPFELEAFYSDPQGVPYPEAK Unmodified 2496.1961 0.19614021 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72;B4DZB4 HSPH1 Heat shock protein 105 kDa yes no 0 0 1 7 0 1 61.347 61.386 3 2.1148E-09 18392 20230619_1887_Aki_TMTPro18x_K_F7 120.32 108.69 44662 34143 35723 42672 29909 39933 39537 39621 41230 51011 45173 41011 60041 37576 41829 59023 44421 43569 41213 31338 36994 42352 31859 40567 39372 40806 42129 50619 46769 42004 59842 40056 43093 58051 42471 41549 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206770000 22742 769 21317 42774 34407 34407 1 9606 Homo sapiens 0.007889985903148045 RGPGATGIGTPAAGPGEER Unmodified 1749.8758 0.87580912 3417 P08913 ADRA2A Alpha-2A adrenergic receptor yes yes 0 0 1 5 0 1 34.531 34.619 3 1.1738E-11 7403 20230619_1885_Aki_TMTPro18x_K_F5 145.05 132.28 6256.3 3987.8 4841.8 6851 9766.5 13961 9321.7 8406.5 10611 6716.2 9924.4 9701.7 7533.1 8882.6 11443 8082.9 10833 11926 5766.2 3677 5128.9 6762.1 9772.8 13434 9454.6 8925.8 10691 6983.2 10116 9689.7 7967.4 9140.2 11515 8361.3 10378 11283 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10926000 22743 3417 21318 42775 34408 34408 1 9606 Homo sapiens 0.03086625230298523 RGPGLYYVDSEGNR Unmodified 1581.7536 0.75356872 3517 P28074;A0A140VJS7;P28074-3 PSMB5 Proteasome subunit beta type-5 yes no 0 0 1 6 0 1 40.135 40.227 3 1.1769E-28 9603 20230619_1886_Aki_TMTPro18x_K_F6 199.87 178.31 87144 80732 90452 101720 85808 113410 113510 113030 319480 115350 102500 107990 126920 102020 89213 142170 121520 117120 80672 74053 91651 101150 90817 113730 118930 115550 304450 116750 116330 109810 127080 107550 93457 140660 115930 111530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 261750000 22744 3517 21319 42776 34409 34409 1 9606 Homo sapiens -0.014037917812856904 RGPGPVDLLLCCGDFQAVR Unmodified 2129.051 0.051013073 1830 A0A8V8TMX5;Q9UK59;A0A8V8TMH0;A0A8V8TNX0;A0A8V8TMF7;F8WAY1 DBR1 Lariat debranching enzyme yes no 0 0 1 2.5 0.5 1 1 59.874 59.894 3 2.315E-14 18576 20230619_1881_Aki_TMTPro18x_K_F2 146.68 127.1 46705 33914 41530 42697 44722 45757 56791 47206 48977 49030 42533 36827 42786 39004 56803 40309 41055 40633 43117 31136 42679 42446 46473 46080 56288 48193 50101 49085 43962 38016 44328 40235 56553 40564 39430 38591 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 474820000 22745 1830 21320 42777;42778 34410 34410 1 9606 Homo sapiens 0.031649607086364995 RGPGTPGPVAR Unmodified 1063.5887 0.58867565 1753 H7C0H7;A0A8I5KRB3;A0A8I5KQY4;A0A8I5KYK3;A0A8I5KQ30;A0A8I5KU55;H7C192;B3KMZ5;Q8N6S5 ARL6IP6 ADP-ribosylation factor-like protein 6-interacting protein 6 yes no 0 0 1 8 0 1 27.649 27.679 3 0.00163 4852 20230619_1888_Aki_TMTPro18x_K_F8 73.435 50.209 8838 6384.8 6439.1 8882.5 11347 8262.5 9671.7 8621.8 10130 6202.3 10505 9265.7 10304 9292.6 10359 7755.7 11692 12460 8148 5868.3 6824.2 8752.1 11324 8419.9 9857.2 8726.9 10291 6499.4 10745 9277.6 10529 9507.1 10591 8090.1 11179 11781 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2828400 22746 1753 21321 42779 34411 34411 1 9606 Homo sapiens 0.05942485660239072 RGPGYTSAPTEEER Unmodified 1548.7168 0.71684887 1771 A0A8I5KT56;Q06787-6;Q06787-5;Q06787-8;A0A087WXI3;B4DFH8 FMR1 Fragile X mental retardation protein 1 yes no 0 0 1 2 0 1 30.418 30.483 3 0.00030425 5901 20230619_1881_Aki_TMTPro18x_K_F2 93.51 56.528 7431.8 5658.3 6457.6 8511.5 8196.4 10184 11198 9944.1 11750 11117 9730.8 10183 11573 6689.3 8244.3 10101 10164 13198 6861.5 5204.2 6684.7 8376.6 8465.3 10159 11123 10208 11861 11142 10160 10256 11575 7217.9 8559 10260 9727.7 12491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19857000 22747 1771 21322 42780 34412 34412 1 9606 Homo sapiens -0.035560883978632774 RGPLAGLGPGSTPR Unmodified 1334.7419 0.74188183 4278 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 yes yes 0 0 1 6 0 1 39.874 39.963 3 1.2485E-06 9515 20230619_1886_Aki_TMTPro18x_K_F6 123.63 92.397 111050 88357 105870 124330 147620 149910 130720 141030 164540 141150 159790 154660 164680 131770 137200 126270 178990 155470 102630 81188 108700 122870 149540 149440 133830 144650 165480 143100 164310 155590 166590 136470 142220 128660 170690 147450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106670000 22748 4278 21323 42781 34413 34413 1 9606 Homo sapiens 0.0879005598603726 RGPLGPNWK Unmodified 1023.5614 0.56139826 3601 P48739;P48739-2;P48739-3;B2R7P6;B3KYB6 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 0 1 5.5 0.5 1 1 42.785 42.873 3 1.7739E-08 10700 20230619_1885_Aki_TMTPro18x_K_F5 197.3 169.97 652450 568250 633050 523100 565400 714510 717530 727090 789500 405980 374300 245600 318630 238110 467880 401920 402320 195350 603400 519910 643180 535300 597460 708290 716720 732990 782340 423250 400650 257260 334030 254480 469100 389980 384140 188500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 483580000 22749 3601 21324 42782;42783 34414;34415 34414 2 9606 Homo sapiens 0.050560021198293725 RGPLPTEEQR Unmodified 1181.6153 0.61528433 3921 Q15149 PLEC Plectin yes yes 0 0 1 3.5 0.5 1 1 30.583 30.659 3 0.00099895 5801 20230619_1883_Aki_TMTPro18x_K_F4 94.82 51.523 23469 18547 26926 29130 48656 48478 51254 54232 60302 43888 47163 62190 61553 41566 39194 48366 53806 46681 21723 17066 27419 28793 48840 47668 51766 54691 60362 45467 49714 61552 61243 43942 41100 48382 51291 44382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38741000 22750 3921 21325 42784;42785 34416 34416 1 9606 Homo sapiens 0.031741297608732566 RGPNYTSGYGTNSELSNPSETESER Unmodified 2731.1958 0.19575887 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;P51114-3;B4DM21;B4DM78;B4DGH9;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 1 3.5 0.5 1 1 39.511 39.559 3 3.8116000000000004E-45 9350 20230619_1883_Aki_TMTPro18x_K_F4 239.87 227.44 34544 26724 30132 46699 26479 31069 38938 29822 32541 56484 47462 51036 57670 46609 40218 60099 50772 50514 31897 24626 31028 45255 28126 32555 38332 31323 34223 55451 48452 51879 57687 48940 41896 59585 48474 48081 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 307640000 22751 1029 21326 42786;42787 34417;34418 34418 2 9606 Homo sapiens -0.10059117658101968 RGPPPPPTASEPTR Unmodified 1458.7579 0.75792582 1699 A0A7P0T8N8;O14776-2;O14776 TCERG1 Transcription elongation regulator 1 yes no 0 0 1 7 0.816 1 1 1 31.098 31.144 3 0.01774 5766 20230619_1887_Aki_TMTPro18x_K_F7 60.474 37.595 18995 10694 13749 17659 24330 20466 20990 21985 20059 13187 18787 16066 18849 14091 16512 15188 22427 17542 17490 9861.5 14579 17285 24301 20520 21323 22117 20414 13892 19321 16135 19117 14670 17148 15382 21367 16654 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290670000 22752 1699 21327 42788;42789;42790 34419 34419 1 9606 Homo sapiens 0.0468971743223392 RGPQAFDAFCEALR Unmodified 1636.778 0.77800934 1070 D3DXD9;D3DXD8;A0A0S2Z3H1;P42575-2;P42575;C9JRR9 hCG_20684;CASP2 Caspase;Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 yes no 0 0 1 1 0 1 52.662 52.662 3 1.2404E-08 15430 20230619_1880_Aki_TMTPro18x_K_F1 153.39 134.32 45924 38708 42138 41654 37587 49113 48458 50045 59568 50555 41029 43976 54061 41510 43081 52250 46883 49522 42444 35464 43061 41948 39778 49110 48566 51056 59321 50884 43554 44852 54220 43494 44261 52155 44839 47056 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79099000 22753 1070 21328 42791 34420 34420 1 9606 Homo sapiens -0.01490854899407168 RGPQLVCTGSDDGTVK Unmodified 1688.8152 0.8151827 1897 B2R9I9;A0MNP2;Q96DI7;Q96DI7-2 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes no 0 0 1 6.5 0.5 1 1 40.725 40.804 3 1.001E-14 9833 20230619_1886_Aki_TMTPro18x_K_F6 185.3 157.57 211670 161470 190020 209470 215880 235370 228080 222160 247440 249490 265360 263980 290560 249460 225010 310550 304700 285750 195480 148270 195340 207900 222540 235740 229870 228620 251770 251140 272440 266960 292720 260970 234820 309460 290630 271740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 499150000 22754 1897 21329 42792;42793 34421;34422 34421 2 9606 Homo sapiens -0.001672281443461543 RGPSEETGGAVFDHPAK Unmodified 1753.8384 0.83836099 2047 A8K4M5;O60563 CCNT1 Cyclin-T1 yes no 0 0 1 5 0 1 37.297 37.389 4 0.00016119 8475 20230619_1885_Aki_TMTPro18x_K_F5 89.982 73.86 21566 17745 21360 21344 25646 28237 20599 23862 31583 29491 29886 28299 32887 26773 23259 34755 31055 30414 19941 16276 21775 21351 26187 27932 21414 24813 31495 29480 30846 28746 33011 28090 24315 34520 29634 28936 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27241000 22755 2047 21330 42794 34423 34423 1 9606 Homo sapiens -0.008404660353562576 RGQICWYQK Unmodified 1237.6026 0.60261115 3449 P14324-2;P14324;A0A087WVN4;A0A087X090;Q14329 FDPS Farnesyl pyrophosphate synthase yes no 0 0 1 5 0 1 43.664 43.745 3 0.00084555 11072 20230619_1885_Aki_TMTPro18x_K_F5 105.1 77.359 270400 245360 242770 202500 234380 303810 248900 264270 354520 111670 84170 69347 83006 68956 102240 89414 97269 70005 249990 224280 248580 209680 245140 298660 253270 268490 343660 120260 98969 72468 85805 72248 103270 88492 92925 66797 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135790000 22756 3449 21331 42795 34424 34424 1 9606 Homo sapiens -0.006686049030122376 RGQQEEEDLQR Unmodified 1386.6488 0.6487693 334 A0A6E1YH78;B3KND9;A0A024R5D5;Q6ZTN6-2;Q6ZTN6-1;Q6ZTN6 ANKRD13D Ankyrin repeat domain-containing protein 13D yes no 0 0 1 1 0 1 27.791 27.791 3 0.00043986 5139 20230619_1880_Aki_TMTPro18x_K_F1 109.6 58.507 6361.2 1856 5419.2 7595.5 6220.9 6202.6 7092 8086.2 9890.4 4749.4 6229.3 6453.3 5665.2 6256.6 7470.8 4813.1 7608.1 6763.8 5851.1 1754 5608.3 7167.4 6423.3 6409.4 7184.4 8042.6 9750.3 5038.6 6543.9 6468.1 5897.9 6379.3 7557.1 4978.9 7272.2 6406.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4500100 22757 334 21332 42796 34425 34425 1 9606 Homo sapiens -0.029089132578747012 RGQQGWDR Unmodified 1001.4791 0.4791252 3220 O14578;O14578-4;A0A7I2V365;A0A7I2V4A6;A0A7I2V4I0;A0A7I2V692;A0A7I2V4H7;H7BYJ3;O14578-3 CIT Citron Rho-interacting kinase yes no 0 0 1 6 0 1 26.828 26.863 3 0.0055102 4711 20230619_1886_Aki_TMTPro18x_K_F6 83.948 24.598 10743 9132.5 13234 11497 14967 18463 14101 13868 17506 10937 12509 10253 17451 12098 11783 5899.7 14925 10495 9955.7 8379.4 13254 11507 15399 18028 14371 14401 17427 11212 13264 10499 17368 12113 12218 6308.7 14219 9935.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4432700 22758 3220 21333 42797 34426 34426 1 9606 Homo sapiens -0.02155519959103458 RGQTCVVHYTGMLEDGK Oxidation (M) 1965.9037 0.90368013 3736 P62942;A0A087WZM5;F6T7Q3;A0A7I2V3S6;Q0VDC6 FKBP1A Peptidyl-prolyl cis-trans isomerase FKBP1A;Peptidyl-prolyl cis-trans isomerase yes no 0 1 1 7 0 1 39.527 39.592 4 0.00037714 9100 20230619_1887_Aki_TMTPro18x_K_F7 85.619 82.857 17051 14340 17757 21089 21538 20048 24232 22667 17827 20938 20459 24932 23939 16848 19820 24849 22344 29624 15775 13181 18057 20722 22091 20414 24077 22940 18652 21352 21054 24847 24102 18090 20397 25089 21404 28060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39630000 22759 3736 21334 42798 34427 34427 2413 1 9606 Homo sapiens -0.04063555896186699 RGQTCVVHYTGMLEDGK Unmodified 1949.9088 0.90876551 3736 P62942;A0A087WZM5;F6T7Q3;A0A7I2V3S6;Q0VDC6 FKBP1A Peptidyl-prolyl cis-trans isomerase FKBP1A;Peptidyl-prolyl cis-trans isomerase yes no 0 0 1 8 0 1 43.33 43.34 4 0.00042994 10820 20230619_1888_Aki_TMTPro18x_K_F8 77.795 73.9 31862 25204 36608 43433 34135 42848 43162 35023 38549 49928 55901 61255 61292 46735 43202 64155 65477 89048 29492 23219 36809 42312 35898 43159 42856 36765 40264 49982 56791 61174 61501 49672 45602 65497 62596 84228 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30228000 22760 3736 21334 42799 34428 34428 1 9606 Homo sapiens -0.028192520335551308 RGQTVNAGVAER Unmodified 1256.6585 0.65854613 333 E7EN32;A0A024R5E3;A0A024R5D2;A0A5F9ZHS3;O00255-2;O00255;A0A5F9ZI68;E7ENS2 MEN1 Menin yes no 0 0 1 6 0 1 27.486 27.519 3 4.2189E-05 4910 20230619_1886_Aki_TMTPro18x_K_F6 119.52 84.989 11810 6322.1 11040 12949 13691 14392 11398 13298 12953 13037 17690 15519 16515 13440 15318 8075.9 16688 15206 10891 5850.4 11327 12536 13948 14409 11685 13651 13294 13263 17860 15565 16826 13662 15631 8627.1 15944 14373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18231000 22761 333 21335 42800 34429 34429 1 9606 Homo sapiens 0.040483195381511905 RGSATSSSNTSLT Unmodified 1267.6004 0.60042213 4434 Q9BTV5;M0QY68;M0R2F6 FSD1 Fibronectin type III and SPRY domain-containing protein 1 yes no 0 0 1 5.5 0.5 1 1 29.47 29.522 2 0.050116 5596 20230619_1886_Aki_TMTPro18x_K_F6 67.704 58.931 5737.7 1678.7 5037.9 7616.1 11440 10668 5469.2 7211.3 7550.6 4088.7 7472.8 10113 7692.7 5498.9 6627.6 3396.7 8494.7 10237 5278.8 1564.7 5282.6 7221.8 11207 10468 5928.9 7522.3 7563.1 4487.2 7696.4 9823.2 7787.3 5724.1 6842.8 3839.5 8121.7 9644 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22040000 22762 4434 21336 42801;42802 34430 34430 1 9606 Homo sapiens -0.022674068977721618 RGSDELFSTCVTNGPFIMSSNSASAANGNDSK Unmodified 3320.4674 0.4673824 1159 P26599;P26599-2;A0A0U1RRM4;P26599-1;A0A7I2V621;A0A7I2V4H6;A0A6Q8PEX4;Q59H49;K7EKJ7 PTBP1 Polypyrimidine tract-binding protein 1 yes no 0 0 1 6.5 0.5 1 1 58.17 58.231 4 1.0193999999999998E-21 17371 20230619_1886_Aki_TMTPro18x_K_F6 146.1 141.14 26225 19363 27012 23019 19453 25508 23337 25643 27981 27528 27639 24706 24395 24744 29568 28621 29124 30812 24241 17766 27238 22995 20945 25600 23472 26227 28226 27636 28223 25224 25274 25718 29947 28825 27882 29236 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79774000 22763 1159 21337 42803;42804 34431;34432 34431 2 9606 Homo sapiens -0.10003259410632381 RGSDIIIVGR Unmodified 1084.6353 0.63529149 2076 A8K5J1;P11172;B5LY71;P11172-3;B5LY64;B5LY69;P11172-2;B5LY70;P11172-4 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase;Orotidine 5'-phosphate decarboxylase yes no 0 0 1 1.5 0.5 1 1 39.221 39.254 3 0.00033807 9450 20230619_1881_Aki_TMTPro18x_K_F2 113.47 58.865 450410 284030 393720 433500 471180 538130 473760 496600 712400 510870 528140 557530 545010 503890 449590 625710 645540 627920 415450 261500 406110 426640 484100 535000 484730 510450 704320 517480 551290 562190 551780 527780 470640 626410 615640 596450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 385930000 22764 2076 21338 42805;42806 34433;34434 34434 2 9606 Homo sapiens 0.09635925491511443 RGSIGENQIKDEK Unmodified 1472.7583 0.75831975 3798 Q05682-5;E9PGZ1;A0A140VKA0;Q05682-4;Q9NYG1;B7Z6G4;B4DPW5;C9J813;Q6PJM5 CALD1 Caldesmon yes no 0 0 2 6.5 0.5 1 1 37.189 37.256 4 0.00018752 8195 20230619_1887_Aki_TMTPro18x_K_F7 99.991 65.103 33146 31098 40617 40217 56714 56907 48069 46004 51611 46667 58874 49303 46977 36450 50686 41215 49652 30836 30734 28531 40873 40074 57335 56037 49081 47764 52643 47217 59484 49518 48463 38268 51360 40806 47386 29467 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 437570000 22765 3798 21339 42807;42808 34435 34435 1 9606 Homo sapiens 0.04085092361469833 RGSLPDTQPSQGPSTPK Unmodified 1751.8802 0.8802258 1539 Q6NWY8;A0A494BYR6;Q86Y91-6;Q86Y91 KIF18B Kinesin-like protein KIF18B yes no 0 0 1 8 0 1 37.656 37.642 3 4.9637E-09 8549 20230619_1888_Aki_TMTPro18x_K_F8 123.08 109.96 13358 9990.8 9659.6 13163 8870.7 14252 12353 11852 14363 12398 14896 11726 16337 12847 8746.4 18870 15609 12992 12317 9175.8 10136 13037 9417.2 14260 12314 12293 14528 12490 15288 12002 16267 13529 9461.8 18506 14850 12412 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18139000 22766 1539 21340 42809 34436 34436 1 9606 Homo sapiens 0.0343608965315525 RGTGGVDTAATGGVFDISNLDR Unmodified 2178.0665 0.066523021 3442 P12532;P12532-2 CKMT1A Creatine kinase U-type, mitochondrial yes no 0 0 1 6 0.816 1 1 1 53.216 53.289 3 2.4096E-67 15300 20230619_1886_Aki_TMTPro18x_K_F6 298.1 278.81 130030 114420 138970 118120 40292 49771 88633 88943 84619 138660 155610 171130 148560 129110 145610 158550 177560 181000 120360 104780 138780 118270 50949 56508 86671 89601 89377 138270 156130 170750 151720 136120 149950 160070 169610 171670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2163300000 22767 3442 21341 42810;42811;42812 34437;34438 34437 2 9606 Homo sapiens 0.024612420309949812 RGTGGVDTAAVGGVFDVSNADR Unmodified 2120.0247 0.024658206 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;H0YJG0 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 1 5.2 0.748 1 2 2 49.392 49.461 3 2.0784E-110 13207 20230619_1885_Aki_TMTPro18x_K_F5 290.15 265.87 695070 609530 684570 758560 534510 632100 657300 698280 620240 902780 960140 974570 1053900 930290 906590 1064500 998170 1129900 642920 559140 694460 752250 570500 650310 655270 714430 648600 902980 973300 984710 1065700 968120 930450 1070800 955060 1072000 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 11330000000 22768 3441 21342 42813;42814;42815;42816;42817 34439;34440;34441;34442;34443 34440 5 9606 Homo sapiens 0.009446863425182528 RGTGQSDDSDIWDDTALIK Unmodified 2091.9709 0.9708913 1325 Q16637;Q16637-3;Q16637-2;Q16637-4;E7EQZ4;A0A1W2PRV5;B4DP61;A0A3G6V6Q6;A0A3G6V326;A0A3G6V713;A0A3G6V3P1 SMN1;SMN2 Survival motor neuron protein yes no 0 0 1 2.5 0.5 1 1 56.343 56.38 3 1.918E-14 16956 20230619_1882_Aki_TMTPro18x_K_F3 150.68 127.12 50654 47110 56217 53406 45152 54417 52813 55463 55149 70940 64675 58574 74275 61728 58904 75125 74599 68329 46921 43167 56463 53461 47996 54980 52927 56987 56521 70465 66276 60157 74769 64291 61120 74853 71180 64994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18794000 22769 1325 21343 42818;42819 34444;34445 34445 2 9606 Homo sapiens -0.03141530879838683 RGTLSGAPAPPTR Unmodified 1279.6997 0.69968266 732 B4DMA8;B4E063;A0A1U9X7Y0;A0A024RCS7;Q9BW19;A0A1U9X7X5 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 yes no 0 0 1 3.5 0.5 1 1 32.965 33.029 3 0.034433 6806 20230619_1882_Aki_TMTPro18x_K_F3 51.073 30.171 105030 85009 93932 92824 92738 100070 101730 96784 122340 103680 104580 100700 122780 101780 110670 106160 107860 105690 97029 77907 96312 93245 96701 100610 102680 99302 122730 104380 108910 102410 124130 105210 112570 106620 103210 100400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42399000 22770 732 21344 42820;42821 34446;34447 34446 2 9606 Homo sapiens 0.0710208057764703 RGTLVAER Unmodified 900.51411 0.51411372 343 A0A024R5K1;Q9BR76;A0A087WW53;F5H390;Q59F81;B4DIU2 CORO1B Coronin;Coronin-1B yes no 0 0 1 8 0 1 28.535 28.56 3 0.011719 5138 20230619_1888_Aki_TMTPro18x_K_F8 78.556 52.662 74498 59738 70619 61331 91967 103060 89202 84710 123730 33588 36000 29751 30572 29213 53009 28922 43592 25276 68848 54720 72334 62394 93845 100620 91071 86418 120300 36769 40829 30419 32505 30120 52846 28952 41673 24113 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18082000 22771 343 21345 42822 34448;34449 34448 2 9606 Homo sapiens 0.05987722848840349 RGVACTQPR Unmodified 1043.5294 0.52944621 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 1 3.67 3.09 1 1 1 23.011 23.082 3 6.9078E-05 3796 20230619_1888_Aki_TMTPro18x_K_F8 103.26 82.926 69304 51801 82108 90102 112690 114300 95273 110200 108550 81240 97705 98581 81543 80360 119670 57908 111780 100240 64147 47739 82839 88094 114060 113600 97517 112040 109310 84209 100140 98618 85621 82317 120220 61131 106950 94802 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71020000 22772 3246 21346 42823;42824;42825 34450;34451;34452 34452 3 9606 Homo sapiens 0.009422663743862358 RGVDYNAEIPFEK Unmodified 1536.7573 0.75725712 2446 Q99459;B3KY60;B4DSH1 CDC5L Cell division cycle 5-like protein yes no 0 0 1 5.5 0.5 1 1 49.966 50.043 3 0.0012167 13766 20230619_1885_Aki_TMTPro18x_K_F5 84.734 65.676 150470 130760 143560 155370 135550 173250 157490 158510 203580 128690 115920 125870 147890 112620 126840 153020 140500 143060 139130 119900 146390 155120 142290 173440 158910 162180 201110 131740 124520 127510 148900 118800 130250 152480 134320 135970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 395700000 22773 2446 21347 42826;42827 34453 34453 1 9606 Homo sapiens 0.010348779925379858 RGVFNVQMEPK Oxidation (M) 1319.6656 0.66560534 3389 Q53XC0;P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 1 1 1.5 0.5 1 1 41.258 41.297 3 0.024595 10390 20230619_1881_Aki_TMTPro18x_K_F2 87.184 39.896 195590 153440 185910 197700 184200 208720 198930 188990 228670 180510 198090 167960 185800 147120 194170 219770 221120 164620 180730 140860 189700 196140 191950 209750 200650 194270 229880 182610 203970 170620 190400 156260 198910 216530 210920 157150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191540000 22774 3389 21348 42828;42829 34454 34454 1999 1 9606 Homo sapiens 0.018559160943823372 RGVFNVQMEPK Unmodified 1303.6707 0.67069072 3389 Q53XC0;P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 1 2.5 0.5 1 1 46.356 46.435 3 4.0061E-05 12520 20230619_1882_Aki_TMTPro18x_K_F3 135.99 103.46 391070 301160 335050 377750 362720 428050 379390 389770 445430 358760 330990 334170 374390 311230 377310 421280 470950 374810 361050 276420 345710 375790 375470 428050 383600 399990 445400 363690 347000 339760 381030 327620 388980 418860 449030 356840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 418340000 22775 3389 21348 42830;42831 34455 34455 1 9606 Homo sapiens 0.031002199570139055 RGVSGDRDENSFSLNSSISSSAR Unmodified 2427.1375 0.13745613 275;1599 A0A024R3Z1;A0A024R3Y8;P11137-4;A0A669KB77;P11137-3;P11137;A8K5Y1;A0A024R409;Q59FX9;P11137-2 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 2 6.5 0.5 1 1 39.281 39.357 4 2.1772E-74 8965 20230619_1887_Aki_TMTPro18x_K_F7 294.08 271.71 42983 32810 41519 41239 36977 36892 41418 45659 43391 53267 47856 51550 50676 43290 46248 60170 52789 59919 39717 30116 42220 40917 38855 37850 41599 46231 44332 53334 49042 52127 51427 45823 47548 60133 50494 56888 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 180490000 22776 275;1599 21349 42832;42833 34456;34457 34457 2 9606 Homo sapiens -0.019027097220714495 RGVVTLLSDYEVCK Unmodified 1637.8447 0.84469192 620 Q9UKD2;A0A024RAE1 MRTO4;C1orf33 mRNA turnover protein 4 homolog yes no 0 0 1 1 0 1 56.732 56.732 3 1.4233999999999999E-22 17189 20230619_1880_Aki_TMTPro18x_K_F1 189.07 175.49 135300 97540 110340 138470 97478 125520 116730 126850 150020 154610 145480 152150 191950 150870 111970 232940 200400 210120 124830 89671 114150 136240 103050 127870 117660 130250 150870 154700 151440 154680 190650 160050 120820 231090 190950 199780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47641000 22777 620 21350 42834 34458 34458 1 9606 Homo sapiens 0.05128335871836498 RGWDENVYYTVPLVR Unmodified 1865.9424 0.94243213 2044 A8K4I8;Q9BPW8;B4DQI7 NIPSNAP1 Protein NipSnap homolog 1 yes no 0 0 1 1.5 0.5 1 1 55.457 55.467 3 1.1168E-18 16615 20230619_1880_Aki_TMTPro18x_K_F1 199.58 187.96 124940 126610 136640 124030 95405 139820 135700 134360 149850 163420 148680 205430 175650 163190 142530 213720 210440 214420 115790 115830 137180 125800 103680 140060 134990 138430 151920 164840 154150 205050 177030 172290 149660 213770 200720 203630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1135600000 22778 2044 21351 42835;42836 34459 34459 1 9606 Homo sapiens 0.044098607921569055 RHAPIEQLAR Unmodified 1189.668 0.6679886 383 P49757-2;A0A024R6C4;B2RCI6;A0A024R681;P49757-4;A0A024R684;A0A024R6F4;P49757-3;P49757;G3V3Z8;P49757-9 NUMB Protein numb homolog yes no 0 0 1 8 0 1 29.676 29.697 3 0.01934 5533 20230619_1888_Aki_TMTPro18x_K_F8 61.344 26.456 12446 4432.4 8157.8 11396 11870 10870 10427 13134 13955 9756.5 14305 11531 12916 9503 9329.3 11347 13601 12306 11435 4130.7 8715 10914 11997 11075 10711 13166 14010 10098 14573 11575 13048 9974.3 9796 11421 12963 11683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2535000 22779 383 21352 42837 34460 34460 1 9606 Homo sapiens 0.08074132614342489 RHATAEEVEEEERDR Unmodified 1854.8456 0.84563121 2639 B4E0B8;Q8TDN6;Q9NUW4 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog yes no 0 0 2 1 0 1 27.918 27.918 4 0.00071002 5207 20230619_1880_Aki_TMTPro18x_K_F1 88.133 64.333 5009.8 4798.4 6385.6 6879.1 5950.9 8607.3 7224.2 9163.4 5541.7 5245.3 6395.2 7023.5 4775 6168.5 6062.5 5779.3 8753.5 6958.8 4647.9 4407.2 6372.2 6797.3 6256.4 8575.2 7166.4 9211.8 5770.9 5560.6 6458.9 7021.5 5004 6361.2 6288.1 5882 8336.8 6603.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6246600 22780 2639 21353 42838 34461 34461 1 9606 Homo sapiens -0.047597782255479615 RHEAFEK Unmodified 915.45626 0.45626449 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8;A0A024R674;P11277-2;P11277;P11277-3;Q59FP5;B2RMN7;H0YJE6;Q71VF8;Q8WX82;Q01082-2;Q01082-3 SPTBN1;SPTB;HSpTB1 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, erythrocytic no no 0 0 1 5.5 0.5 1 1 29.831 29.884 3 0.0021 5631 20230619_1885_Aki_TMTPro18x_K_F5 133.23 35.436 69401 15165 62999 70087 97692 69265 95550 97561 121450 82702 111470 108520 110730 101820 82637 62603 104230 111180 63830 14441 65062 66168 98409 70726 97216 97305 121700 85215 114740 108710 111750 103210 85599 66347 99568 105050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46616000 22781 2337;3778;3779 21354 42839;42840 34462;34463 34462 2 9606 Homo sapiens -0.004845390765808588 RHEILQWVLQTDSQQ Unmodified 1879.9541 0.95405945 4323 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 1 8 0 1 56.336 56.393 2 0.011865 16312 20230619_1888_Aki_TMTPro18x_K_F8 80.245 66.475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22782 4323 21355 42841 34464 34464 1 9606 Homo sapiens 0.049280578155048715 RHEMPPHIYAITDTAYR Oxidation (M) 2086.0054 0.005443089 148 P35579;A0A8I5KWT8;A0A024R1N1;P35579-2;Q86XU5;B4E3S1;A0A8I5KYI1;Q5BKV1;A0A8I5KU92 MYH9 Myosin-9 yes no 0 1 1 8 0 1 37.611 37.597 4 0.043682 8527 20230619_1888_Aki_TMTPro18x_K_F8 49.865 40.933 27687 14335 24031 27926 37425 32760 27571 27724 36628 23051 33840 30736 26263 24868 33867 28063 28296 29901 25515 13257 24925 27116 37508 32644 28647 28554 36635 23810 34509 30681 27417 25999 33967 28274 27138 28374 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26730000 22783 148 21356 42842 34465 34465 76 1 9606 Homo sapiens 0.0058805851795113995 RHEQFIPIAADK Unmodified 1423.7572 0.75719754 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DM27 PRRC2C Protein PRRC2C yes no 0 0 1 8 0 1 41.714 41.712 3 0.0010284 10203 20230619_1888_Aki_TMTPro18x_K_F8 89.629 48.905 22783 15122 25939 26378 26659 28285 28229 28293 32573 26200 27840 28234 29430 22991 26416 30918 25738 31073 21067 13944 26100 25725 27662 28442 28508 28851 32733 26661 28858 28404 29828 24317 26905 30936 24670 29492 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9707600 22784 2894 21357 42843 34466 34466 1 9606 Homo sapiens 0.062269227832530305 RHEQSGGPEHGPER Unmodified 1571.7189 0.71891455 4485 Q9C0J8 WDR33 pre-mRNA 3' end processing protein WDR33 yes yes 0 0 1 2 0 1 22.909 22.978 4 0.0255 3703 20230619_1881_Aki_TMTPro18x_K_F2 58.752 35.517 0 2622.4 2133.5 0 1070.3 5546.6 1398.1 928.6 1485.5 1628.9 977.37 1317.7 0 0 2911.6 0 5028.6 0 0 2372.8 1966.8 0 1233.8 5076.4 1394.3 1282.1 1489.2 1602.7 991.65 1300.9 0 0 3007.5 0 4756 0 0 1 1 0 1 1 1 1 1 1 1 1 0 0 1 0 1 0 3012200 22785 4485 21358 42844 34467 34467 1 9606 Homo sapiens -0.04407614869410281 RHIEIFTDLSSR Unmodified 1472.7736 0.77357588 3444 P13010;Q53TC2;C9JZ81 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 1 3.67 3.09 1 1 1 43.257 43.288 3;4 7.6273E-10 11562 20230619_1880_Aki_TMTPro18x_K_F1 145.08 102.74 111860 74825 65854 75827 73981 76465 74906 81667 100040 85975 97523 109370 109980 96183 73153 111020 106310 121220 102970 68584 70884 76552 76359 77450 76265 83185 100360 87393 100740 109520 110150 100420 77079 111790 101500 114970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171460000 22786 3444 21359 42845;42846;42847 34468;34469 34468 2 9606 Homo sapiens 0.056100039493230724 RHIIDNR Unmodified 922.5097 0.50969704 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;C9J2Q4;C9J938;C9JB25;C9IY94;H7C310 SEPT2 Septin-2 yes no 0 0 1 8 0 1 23.084 23.126 3 0.0011719 3790 20230619_1888_Aki_TMTPro18x_K_F8 117.18 67.851 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22787 3910 21360 42848 34470 34470 1 9606 Homo sapiens 0.04534258425940152 RHLEAAALLSER Unmodified 1364.7524 0.75244651 4668 Q9UJA5;Q9UJA5-4;Q9UJA5-2 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes no 0 0 1 7 0 1 38.863 38.927 4 0.002404 8823 20230619_1887_Aki_TMTPro18x_K_F7 80.312 30.189 30264 17373 25549 30360 28183 30041 30581 35144 37292 34992 35687 34149 38388 31520 25053 40756 36149 36089 27896 16032 26413 29571 29142 30499 30913 35531 37549 35343 36777 34638 38461 33088 26410 40500 34480 34328 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19651000 22788 4668 21361 42849 34471 34471 1 9606 Homo sapiens 0.08466038640426632 RHLEFSHDQYR Unmodified 1486.7066 0.70655895 4582 Q9NR45;V9HW39 NANS;HEL-S-100 Sialic acid synthase yes no 0 0 1 6.5 0.5 1 1 29.55 29.618 4 3.4577E-05 5255 20230619_1887_Aki_TMTPro18x_K_F7 138.89 106.4 25657 5436.2 15663 22155 25481 15184 27034 28767 26877 20934 25979 32798 27938 22173 14713 29563 18324 26150 23538 5156.6 16917 20881 25647 16191 27153 28245 27333 21918 26811 32393 27811 23601 15481 29355 17551 24845 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49368000 22789 4582 21362 42850;42851 34472 34472 1 9606 Homo sapiens -0.017326065417591963 RHLTGEFEK Unmodified 1115.5724 0.57235688 2668 B5MDF5;P62826;J3KQE5;F5H018;H0YFC6 RAN GTP-binding nuclear protein Ran yes no 0 0 1 6.67 0.471 1 2 35.281 35.347 3;4 3.771E-06 7476 20230619_1887_Aki_TMTPro18x_K_F7 155 126.05 366500 78572 283640 353340 398690 260340 404670 509130 260710 405550 438240 588830 488490 354310 252330 527190 471220 691600 336700 74765 296980 332670 403520 275850 403610 499920 281520 419950 444250 581200 485430 382760 274430 535190 450270 654340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1049099999.9999999 22790 2668 21363 42852;42853;42854 34473;34474 34474 2 9606 Homo sapiens 0.01919359703470036 RHPEYAVSVLLR Unmodified 1438.8045 0.80448208 2776 CON__P02769 yes yes 0 0 1 3.5 0.5 2 2 42.79 42.845 3;4 1.554E-15 10822 20230619_1882_Aki_TMTPro18x_K_F3 186.16 157.46 + 65236 138450 157230 71067 306210 339940 204740 195380 300850 111120 105610 123950 78575 87268 116930 102550 122070 151640 61627 125990 153830 81071 303500 320160 215040 207040 292790 117720 116540 123970 83143 92022 118440 105580 116950 143400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 368820000 22791 2776 21364 42855;42856;42857;42858 34475;34476 34475 2 9606 Homo sapiens 0.10263202054215981 RHPYFYAPELLYYANK Unmodified 2044.0207 0.020682448 2776 CON__P02769 yes yes 0 0 1 5 0 1 57.002 57.064 4 1.4732E-05 16646 20230619_1885_Aki_TMTPro18x_K_F5 101.75 82.43 + 39326 77813 90700 44131 158440 197380 120250 95369 183430 59362 54501 74570 45574 51294 69470 67508 70647 105200 37079 70847 88656 49440 158350 185630 125200 103430 177810 62755 61767 74185 48103 54534 70290 69670 67822 99394 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 279660000 22792 2776 21365 42859 34477 34477 1 9606 Homo sapiens 0.040432933774582125 RHQGTFTDEK Unmodified 1217.5789 0.57889882 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 1 5 0 1 29.515 29.589 4 0.0005225 5529 20230619_1885_Aki_TMTPro18x_K_F5 108.7 74.736 21274 7455.6 17619 24140 25748 26233 18272 26022 37248 30016 36657 51115 49191 43480 22503 42571 63947 85815 19573 6986.2 18355 22990 25936 26334 19457 26695 36839 30780 38235 50632 48597 45110 25752 45131 60935 80969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23699000 22793 4016 21366 42860 34478 34478 1 9606 Homo sapiens -0.021187471358189214 RHREELEQSK Unmodified 1310.6691 0.66911081 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;H0YFY6;Q96HN5;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 2 6 0 1 26.224 26.259 4 0.0059524 4488 20230619_1886_Aki_TMTPro18x_K_F6 74.162 47.047 4232.2 877.15 3758.5 3583.9 6066.6 5574.2 4971.3 4835.3 5966.2 4315.2 5958.7 5497.4 5212.8 4528.5 5031.3 987.08 5016.2 7198 3891.5 832.37 3889.8 3417.2 6083 5465 5105.2 4975.7 6014.7 4428.5 6077.8 5486.6 5334.1 4526 5096.2 1409.1 4814.7 6762.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5544100 22794 349;3906 21367 42861 34479 34479 1 9606 Homo sapiens 0.026203021925994108 RHSVVAGGGGGEGR Unmodified 1294.649 0.64904407 4130 Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A8I5KSP1 LARP1 La-related protein 1 yes no 0 0 1 6.5 0.5 1 1 22.962 23.03 3 6.8624E-06 3779 20230619_1886_Aki_TMTPro18x_K_F6 106.6 103.41 28669 13342 29065 32627 29650 31248 32222 31450 39760 29742 40118 36423 40472 33472 29992 25065 39496 39667 26441 12397 29521 31308 30816 31675 32575 32086 40042 30375 41117 36570 40792 34206 31176 26162 37699 37521 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45633000 22795 4130 21368 42862;42863 34480 34480 1 9606 Homo sapiens 0.013505512526535313 RHTPLSK Unmodified 837.48209 0.48208531 536 A0A024R8S3;P61956-2;P61956;A8MUA9;A8MU27;P55854;P55854-2 SUMO2;SUMO3 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 3 yes no 0 0 1 3.5 0.5 2 2 25.442 25.545 3 0.032419 3842 20230619_1883_Aki_TMTPro18x_K_F4 70.256 27.009 219380 68796 211640 248340 276510 240460 233930 270780 264420 182530 271650 315410 220670 194170 189590 122930 336880 277630 202020 64721 216730 235560 280470 244210 239410 272200 267560 193200 276370 309720 225550 200630 201030 133570 320490 262280 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 114200000 22796 536 21369 42864;42865;42866;42867 34481;34482;34483 34482 3 9606 Homo sapiens 0.056843551657038915 RHWGGNVLGPK Unmodified 1219.6574 0.65742391 3722 P62424;Q9BY74;Q5T8U2 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 0 0 1 5.5 0.5 1 1 38.053 38.137 4 0.016101 8748 20230619_1886_Aki_TMTPro18x_K_F6 66.595 36.611 76786 49929 65005 64148 96129 113760 80630 92583 134210 31862 28081 27869 32539 29456 40716 33097 32395 27245 70821 45872 67485 64247 97175 110720 83772 94342 129160 35562 34009 28588 33519 30511 40755 32906 31040 25958 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77672000 22797 3722 21370 42868;42869 34484 34484 1 9606 Homo sapiens 0.056381499599410745 RIAELSEDDQK Unmodified 1302.6416 0.64155866 2806 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;Q9BZE4-2;B4DHR2;Q9BZE4-3 GTPBP4 Nucleolar GTP-binding protein 1 yes no 0 0 1 2.5 0.5 1 1 40.719 40.785 3 1.544E-05 9938 20230619_1882_Aki_TMTPro18x_K_F3 142.51 107.5 124200 89147 107780 115940 135900 139040 119490 131050 142900 143160 155560 150420 170500 128940 128010 187850 165030 142980 114630 81878 111300 115170 138490 138680 122210 134710 144820 144250 159570 151770 171440 136820 133290 185140 157390 136360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 400550000 22798 2806 21371 42870;42871 34485 34485 1 9606 Homo sapiens 0.0023435414173036406 RIAEMETQK Unmodified 1104.5597 0.55974328 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;Q6NSG3;Q58F29;Q6P169;C9JR83 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 1 5.5 0.5 1 1 38.295 38.383 3 0.00019819 8886 20230619_1886_Aki_TMTPro18x_K_F6 129.88 99.313 106670 69596 95772 101050 111560 127390 112900 118380 162390 97716 114900 95240 113200 86939 89878 126190 144040 107330 98430 64027 98471 99774 114810 126550 115250 120970 160500 99933 119870 96694 114510 92047 94978 125010 137040 102280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60997000 22799 4593 21372 42872;42873 34486 34486 1 9606 Homo sapiens 0.011645802489056223 RIAGQDLR Unmodified 927.52501 0.52501276 1188 A0A140VJN3;Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes no 0 0 1 7.5 0.5 1 1 31.342 31.396 3 0.0046812 6115 20230619_1888_Aki_TMTPro18x_K_F8 85.67 26.753 149180 114250 124440 128650 196320 210500 158680 163420 224840 54950 63320 50842 49583 47664 92633 53595 67477 43818 137700 104760 129560 129800 197360 205560 164060 167240 218340 61601 71959 51840 53192 49547 91824 53355 64641 41809 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 55144000 22800 1188 21373 42874;42875 34487;34488;34489 34489 3 9606 Homo sapiens 0.05835125223120485 RIALTDNALIAR Unmodified 1325.7779 0.77793298 3473;3341 P18124;A0A024R814;A8MUD9;O95036 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 no no 0 0 1 3 0.816 1 1 1 46.541 46.608 3 1.8825E-07 12593 20230619_1882_Aki_TMTPro18x_K_F3 163.99 113.86 1350600 1095200 1255500 1145000 1037800 1214100 1180500 1282400 1117800 1558700 1203800 1141900 1856100 1299800 1066900 2216000 1751000 1650700 1248000 1003300 1279200 1154200 1099500 1224500 1181300 1312100 1149000 1547000 1258500 1185400 1835000 1384900 1142900 2176700 1668000 1574200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 747630000 22801 3473;3341 21374 42876;42877;42878 34490 34490 1 9606 Homo sapiens 0.12807513162874784 RIANLQTDLSDGLR Unmodified 1570.8427 0.84271808 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98 FLNA Filamin-A yes no 0 0 1 8 0 1 49.045 49.111 2 8.7261E-47 13151 20230619_1888_Aki_TMTPro18x_K_F8 300.95 265.73 15841 15514 13883 15234 16454 20588 18910 20247 25526 21539 19824 21195 22370 17982 14404 22679 20890 27181 14651 14196 14318 15487 16988 20405 19121 20729 25398 21696 20716 21419 22373 18918 15193 22937 19968 25746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156080000 22802 3484 21375 42879 34491 34491 1 9606 Homo sapiens 0.08013043178220869 RIAQQLER Unmodified 1012.5778 0.57777661 3111 I3L4A1;Q96FZ7 CHMP6 Charged multivesicular body protein 6 yes no 0 0 1 8 0 1 33.078 33.078 3 0.0013482 6763 20230619_1888_Aki_TMTPro18x_K_F8 118.33 61.287 48086 36483 43865 49556 66333 67926 53680 62819 75255 26308 40331 33524 29374 25292 37516 28092 42544 28591 44411 33516 45274 49193 66793 67163 55511 63521 73872 28849 42505 33489 30742 26500 38225 28249 40560 27202 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18057000 22803 3111 21376 42880 34492 34492 1 9606 Homo sapiens 0.07199083285945562 RIATGSFLK Unmodified 991.58147 0.581465 3489 P22234;P22234-2;E9PBS1;B4DGX3;D6RF62 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 1 5.5 0.5 1 1 44.794 44.877 3 0.00035153 11637 20230619_1886_Aki_TMTPro18x_K_F6 102.42 48.929 697280 633270 572620 517420 694700 909830 685370 649280 860040 98617 98634 117880 137980 107280 264010 137900 136330 119330 644240 578820 593740 537760 713440 884260 696300 666530 833490 131460 139240 118960 145790 112630 258490 137470 131560 113600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 457020000 22804 3489 21377 42881;42882 34493 34493 1 9606 Homo sapiens 0.08533753059805349 RIAVVGEGR Unmodified 955.55631 0.55631289 4000 Q59ER5;Q53H17;Q53GN4;A0A8V8TNU2;A0A8V8TNT7;O75083;A0A8V8TP22;A0A8V8TQ74;A0A8V8TQK0;V9HWG7;A0A8V8TP31;D6RD66;B3KXN4 WDR1;HEL-S-52 WD repeat-containing protein 1 yes no 0 0 1 5.33 3.09 1 1 1 33.228 33.257 3 0.00065531 7285 20230619_1880_Aki_TMTPro18x_K_F1 110.53 36.361 212820 137010 171620 207580 251390 229270 226120 251580 267030 276600 272280 307190 300840 249890 191360 343180 341190 310400 196210 126120 179120 204030 253900 230740 230740 256040 270140 279030 280430 308510 301060 264530 205610 341060 324780 295280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184850000 22805 4000 21378 42883;42884;42885 34494;34495 34494 2 9606 Homo sapiens 0.07675698257241947 RICNAVSPDK Unmodified 1158.5815 0.58154136 1651 A0A7I2V2U6;B2R7W0;P13995;P13995-2;B8ZZU9;A0A7I2YQD4;A0A7I2V482 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes no 0 0 1 8 0 1 36.576 36.563 3 0.00049731 8070 20230619_1888_Aki_TMTPro18x_K_F8 93.345 63.014 54358 36780 48661 53092 48342 55062 49451 52603 75722 65882 71526 94355 83741 77747 62495 88725 111300 102950 50165 33829 49923 52284 50349 55457 50621 54278 75470 66762 74238 93869 84178 81294 66752 89699 105960 97666 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53637000 22806 1651 21379 42886 34496 34496 1 9606 Homo sapiens 0.008593849974658951 RIDPNYR Unmodified 932.48281 0.48281359 2377 B3KPM6;O94830-2;O94830;H0YF17 DDHD2 Phospholipase DDHD2 yes no 0 0 1 7.5 0.5 1 1 31.533 31.585 3 0.021534 5954 20230619_1887_Aki_TMTPro18x_K_F7 80.229 52.122 73997 53280 69099 84966 90369 92555 82656 100870 108240 82567 115900 134240 114590 101050 91527 93356 157260 137520 68334 49052 71005 83250 91975 93171 84621 101960 109000 86002 118580 132750 115990 104940 97095 96410 149700 130220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 16148000 22807 2377 21380 42887;42888 34497 34497 1 9606 Homo sapiens 0.013871498147523198 RIDQLNR Unmodified 913.50936 0.50936269 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 0 1 1 0 1 32.037 32.037 3 0.021291 6805 20230619_1880_Aki_TMTPro18x_K_F1 79.451 9.8234 41288 32879 43851 50389 67159 64066 60380 60533 74551 47786 65577 59692 54119 49147 59796 50072 73584 64666 38191 30242 44717 49595 67661 63662 61685 61741 74674 49389 67172 59734 55910 51095 61405 51153 70210 61298 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16969000 22808 3954 21381 42889 34498 34498 1 9606 Homo sapiens 0.049148387060995447 RIEAEEAIK Unmodified 1057.5768 0.57677356 1058;3893;945 Q96J71;Q14576;Q14576-2;P26378-4;A0A494C0F8;P26378;P26378-3;P26378-1;P26378-5;P26378-2;A0A494C147;B1APY9;A0A494C1D9;A0A0R4J2E6;B7Z5E0;A0A494C015;A0A494C173;A0A0A0MRX1;Q12926-2;Q12926;B1AM48;C9JB16 ELAVL3;ELAVL4;ELAVL2 ELAV-like protein;ELAV-like protein 3;ELAV-like protein 4;ELAV-like protein 2 no no 0 0 1 3.2 0.748 1 2 2 40.15 40.204 2;3 6.2152E-06 9683 20230619_1882_Aki_TMTPro18x_K_F3 186.78 126.19 210130 172200 183940 229450 218510 240430 210930 212920 272290 173080 200760 214090 208190 178800 168670 235910 233850 211060 194110 158110 189810 227040 224190 241620 214960 218450 270750 178520 209700 214410 210490 188520 176170 234570 222960 200820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1828299999.9999998 22809 3893;1058;945 21382 42890;42891;42892;42893;42894 34499;34500 34500 2 9606 Homo sapiens 0.05028824126361542 RIEAIVK Unmodified 827.52289 0.52288749 2101 Q9UEH5;Q6IPW4;Q6IB76;A8K750;E7EPT4;P19404 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes no 0 0 1 1 0 1 41.745 41.745 3 0.048452 10853 20230619_1880_Aki_TMTPro18x_K_F1 63.961 16.212 73944 56749 64958 74633 103730 115370 93794 96018 129760 41445 60593 52565 51536 49512 65073 52873 69213 52902 68279 52113 67388 74395 104500 113090 96166 97945 127080 45342 64995 52861 53614 51315 66086 53129 66070 50306 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45816000 22810 2101 21383 42895 34501 34501 1 9606 Homo sapiens 0.10222696485334382 RIEDIHLLVER Unmodified 1391.7885 0.78849767 2883 E5RIA2;E7EUF1;Q13822;Q13822-3;Q13822-2 ENPP2 Ectonucleotide pyrophosphatase/phosphodiesterase family member 2 yes no 0 0 1 6.5 0.5 1 1 46.803 46.888 4 0.00044127 12551 20230619_1886_Aki_TMTPro18x_K_F6 100.93 63.74 56249 43796 53706 53948 18601 18634 28934 29304 28414 39708 38047 35114 47292 34441 36668 46707 43813 34904 51976 40189 54215 53214 22366 21798 28644 29541 29410 39401 38961 35855 47429 36210 37919 46053 41789 33310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124610000 22811 2883 21384 42896;42897 34502 34502 1 9606 Homo sapiens 0.10827495817329691 RIEDNLPAGEE Unmodified 1241.5888 0.58879481 839 A0A087WWM0;O43617-2;O43617;A0A087WYS5 TRAPPC3 Trafficking protein particle complex subunit 3 yes no 0 0 1 1.5 0.5 1 1 41.989 42.028 2 0.00032972 10959 20230619_1880_Aki_TMTPro18x_K_F1 111.31 104.78 71779 59049 66511 73970 79359 80653 77097 79807 94098 92709 96672 101160 104120 84200 82607 110070 120200 106860 66334 54183 68231 73560 81335 81051 78403 81928 95030 93258 99393 101750 105020 88791 86598 109930 114550 101580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171310000 22812 839 21385 42898;42899 34503;34504 34504 2 9606 Homo sapiens -0.022336039210813396 RIEDYGLKPVPGDLVLK Unmodified 1911.0829 0.082948353 2443 B3KY42;Q96PZ0;Q96PZ0-2;B3KRB2 PUS7 Pseudouridylate synthase 7 homolog yes no 0 0 2 2 0 1 56.584 56.602 4 0.014741 17231 20230619_1881_Aki_TMTPro18x_K_F2 64.123 45.528 69316 56923 67251 74706 59227 72511 75087 71542 75122 89450 86677 82675 87539 79031 85746 113230 98210 101020 64081 52258 68424 73944 62622 73448 74811 73653 77055 89212 88415 84179 89275 83421 88068 112460 93866 96068 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67648000 22813 2443 21386 42900 34505 34505 1 9606 Homo sapiens 0.16385019725726124 RIEELLAEK Unmodified 1099.6237 0.62372375 2301 J3JZZ9;B2RBP3;Q8TBC4 UBE1C;UBA3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 1 5.5 0.5 1 1 52.169 52.244 3 0.00023211 14879 20230619_1886_Aki_TMTPro18x_K_F6 126.19 72.666 558030 499050 559760 647250 648030 757700 704360 693740 734330 711660 666010 627130 735150 579470 659100 729720 708560 687740 516310 457960 570470 642710 667850 756140 707760 713570 743970 715770 689370 639090 744230 607520 674660 728360 677320 653740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216070000 22814 2301 21387 42901;42902 34506 34506 1 9606 Homo sapiens 0.07789683677515313 RIEELNK Unmodified 900.50288 0.50288033 317;2900;2897 A0A024R534;O94776;H0YIT0;Q53SC0;E9PF88;E9PCS8;E7EQY4;E7EV10;Q9BTC8-2;Q9BTC8;E7ESY4;Q13330-3;Q13330;Q13330-2;H7C3F3 MTA2;MTA1;tmp_locus_6;MTA3 Metastasis-associated protein MTA2;Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 no no 0 0 1 6 0.816 1 1 1 38.525 38.604 3 0.0020617 8973 20230619_1886_Aki_TMTPro18x_K_F6 134.15 17.053 454290 291000 408470 483610 596630 587560 525660 478750 695190 524080 634940 613120 640140 501230 521410 445950 725720 563770 419150 268190 421960 473440 602770 583680 539070 498020 695680 530420 654160 614350 647420 518130 543030 455970 691270 534820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 379420000 22815 317;2897;2900 21388 42903;42904;42905 34507 34507 1 9606 Homo sapiens 0.048649007547169276 RIEFAEQINK Unmodified 1246.667 0.66698555 4506 Q9H307;A8K964;B4DTD4 PNN Pinin yes no 0 0 1 7.5 0.5 1 1 46.281 46.344 3 0.00050825 12024 20230619_1888_Aki_TMTPro18x_K_F8 105.46 56.16 156320 113920 128370 150970 148590 160510 159890 152130 175890 157220 155040 158340 177850 150950 162200 182170 162700 161230 144230 104640 133160 149500 153090 161380 161020 156180 177450 158710 161090 160480 180040 157570 165350 181360 155650 153360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 724820000 22816 4506 21389 42906;42907 34508 34508 1 9606 Homo sapiens 0.05351873454787892 RIEGLIER Unmodified 984.57163 0.5716286 283 Q53S54;A0A024R475;Q13618-2;Q13618;B7Z600;Q13618-3;H7C399 CUL3 Cullin-3 yes no 0 0 1 6.5 0.5 1 1 40.782 40.862 3 0.0012935 9875 20230619_1886_Aki_TMTPro18x_K_F6 121.73 47.268 79112 65839 69578 70951 77876 84711 76514 77049 101050 91665 91451 95157 111480 84047 87152 121460 112520 113800 73087 60326 71599 71442 80255 84472 77986 79623 101190 91996 95155 96114 111940 89080 90639 120910 107420 108160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152630000 22817 283 21390 42908;42909 34509 34509 1 9606 Homo sapiens 0.07872565054424285 RIEGSGDQIDTYELSGGAR Unmodified 2022.9607 0.96066097 1021 A0A0U1RQP1;A0A0D9SFE4;A0A994J7J4;Q05193-3;Q05193;B4DHH5;A0A0D9SFB1;B7ZAC0;B4DK06;Q05193-5;Q05193-2;Q59GI5;A0A994J5P0;A0A1B0GU67 DNM1 Dynamin-1 yes no 0 0 1 3.5 0.5 1 1 44.325 44.383 3 5.3673E-40 11573 20230619_1882_Aki_TMTPro18x_K_F3 213.03 205.3 55504 53206 51543 69665 52408 62711 64683 72586 66642 70891 76868 89346 90783 76346 71039 90088 100050 100160 51347 48819 52824 68889 54733 64146 64596 73429 68214 72260 79067 89412 91294 79915 74287 90814 95448 95028 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143120000 22818 1021 21391 42910;42911 34510;34511 34510 2 9606 Homo sapiens -0.009900938144483007 RIEGSGDQVDTLELSGGAR Unmodified 1958.9657 0.96574634 3619 P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96;K7EMQ3;B4DJ53 DNM2 Dynamin-2 yes no 0 0 1 2.5 0.5 1 1 44.032 44.108 3 1.0527E-24 11741 20230619_1881_Aki_TMTPro18x_K_F2 205 187.08 66571 36191 52503 62888 60930 72858 66150 64769 68105 85320 95741 86210 89472 75654 74679 87376 100450 96197 61320 33404 54703 61387 62834 72678 66472 67275 70425 85125 96571 87143 90817 79029 77689 88074 95834 91290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 390310000 22819 3619 21392 42912;42913 34512 34512 1 9606 Homo sapiens 0.02462210048201996 RIEIQPK Unmodified 882.5287 0.52870115 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258 COPB2 Coatomer subunit beta' yes no 0 0 1 1.5 0.5 1 1 39.251 39.284 3 0.018489 9754 20230619_1880_Aki_TMTPro18x_K_F1 78.334 10.111 412040 299820 361440 402440 494740 473260 462390 481190 609450 488610 535220 499780 596300 457760 453190 624130 661640 549420 380350 275450 373540 398860 502260 473470 472520 491090 609340 494010 554850 505930 599790 482480 475740 619820 630260 523050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 370430000 22820 3031 21393 42914;42915 34513;34514 34513 2 9606 Homo sapiens 0.08273794996989636 RIEPADAHVLQK Unmodified 1375.7572 0.75719754 2895 E7EQ69;Q9GZZ1;C9J5D1;Q9GZZ1-2;B0AZT5 NAA50 N-alpha-acetyltransferase 50 yes no 0 0 1 7 0.816 1 1 1 39.945 39.992 4 0.0002589 9213 20230619_1887_Aki_TMTPro18x_K_F7 99.531 59.099 208880 145780 201470 204000 188630 219770 225360 213890 248530 314050 283390 282510 343370 250720 214160 336940 311560 282470 192910 134020 205120 201420 198040 220840 225850 221580 253670 310950 291560 287130 342180 264370 226080 333800 296960 268980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 957210000 22821 2895 21394 42916;42917;42918 34515 34515 1 9606 Homo sapiens 0.08434922783203547 RIEQHYFEDR Unmodified 1391.6582 0.65821178 2346 B7Z9F3;B3KM74;O75431-2;O75431;C9JNK6 MTX2 Metaxin-2 yes no 0 0 1 3.5 0.5 1 1 35.323 35.375 4 0.00064339 7716 20230619_1882_Aki_TMTPro18x_K_F3 103.91 94.122 145030 109170 156360 166040 183900 198290 189420 197140 201700 176080 193010 200960 221710 182810 184890 204530 219130 210160 134130 100430 158380 163370 188890 197960 191070 200880 204410 179870 199740 202310 223610 190340 190650 205460 209270 199590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 429930000 22822 2346 21395 42919;42920 34516;34517 34516 2 9606 Homo sapiens -0.021951001816887583 RIESLIDRDYMER Unmodified 1694.841 0.84100352 1592;3864 Q13620-3;A0A7P0T954;Q13620;Q13620-1;K4DI93;A0A669KAX4;A0A7P0TAQ3;A0A7P0T9L3;A0A7P0T8P8;A0A804CL36;Q13619;B2RBV7;A0A0A0MR50;Q13619-2;B4DKT2 CUL4B;CUL4A Cullin-4B;Cullin-4A no no 0 0 2 6 0 1 47.468 47.549 4 0.00020854 12847 20230619_1886_Aki_TMTPro18x_K_F6 97.45 84.249 44666 33433 37456 37463 42343 51619 48104 45855 63550 31959 28758 33596 36226 27877 39639 39823 37310 38271 41224 30657 38733 37699 43832 50979 48604 46870 62390 33160 31519 33850 36896 29587 40119 39738 35727 36363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100310000 22823 1592;3864 21396 42921 34518 34518 1 9606 Homo sapiens 0.021376660979512963 RIEYIEAR Unmodified 1048.5665 0.56654322 4279 Q8WUW1;Q8WUW1-2 BRK1 Protein BRICK1 yes no 0 0 1 5.5 0.5 1 1 37.362 37.447 3 0.00084994 8439 20230619_1885_Aki_TMTPro18x_K_F5 116.3 75.275 166390 134180 162770 168650 178090 199100 182530 168290 210560 206050 225420 209750 225660 179700 204780 239190 229500 208960 153820 123140 165910 167870 183940 198310 184660 175100 213520 206380 230480 211860 229230 189510 210150 237630 219200 198860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 210490000 22824 4279 21397 42922;42923 34519;34520 34519 2 9606 Homo sapiens 0.044202611917853574 RIFEAFK Unmodified 909.50724 0.50723743 3850 Q13435;E9PPJ0;Q7Z3K9 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 1 4 0 1 50.173 50.208 3 0.012682 14069 20230619_1883_Aki_TMTPro18x_K_F4 91.318 43.469 388570 340490 277340 303920 426820 813930 425900 460380 929850 15464 7225.5 30887 42980 32002 50636 41917 35449 39701 358610 311450 293880 316460 435610 775270 444010 482400 878830 42247 52415 31067 43561 33501 50465 41867 34093 37716 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 296450000 22825 3850 21398 42924 34521 34521 1 9606 Homo sapiens 0.04886409968275984 RIFHTVTTTDDPVIR Unmodified 1769.9424 0.94243213 3242 O15371-2;O15371-3;O15371;B4E1K8;B0QYA5;B0QYA4 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 1 8 0 1 42.582 42.585 4 1.038E-10 10506 20230619_1888_Aki_TMTPro18x_K_F8 160.65 137.23 56584 32099 54969 63111 60643 65623 59680 58555 66188 63792 80957 85195 79485 74649 65634 73970 95718 95059 52209 29675 56103 61151 62512 65959 60454 60480 67627 64852 82314 85149 80582 77300 68687 75503 91287 90066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164830000 22826 3242 21399 42925 34522 34522 1 9606 Homo sapiens 0.08825860792148887 RIGFDVVTLSGTR Unmodified 1419.7834 0.78341229 4063 Q5TDE9;Q9BSD7;Q5TDF0 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase yes no 0 0 1 4 0 1 51.398 51.426 3 0.0015761 14639 20230619_1883_Aki_TMTPro18x_K_F4 80.632 35.264 177270 144360 185720 189940 150870 175910 179780 178650 192490 203840 204140 198770 222720 180000 198400 237010 224780 221100 163980 132540 187460 187900 160280 178980 180090 183050 195930 204470 209680 201470 225510 189340 203840 236250 214790 210190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99164000 22827 4063 21400 42926 34523 34523 1 9606 Homo sapiens 0.09031191954704809 RIGNLQTDLSDGLR Unmodified 1556.8271 0.82706802 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;A0A804HJC2 FLNB Filamin-B yes no 0 0 1 8 0 1 48.496 48.563 3 0.021697 12935 20230619_1888_Aki_TMTPro18x_K_F8 58.577 40.876 41126 29309 40893 41603 38289 47619 41929 46051 50936 44183 47662 48664 56374 38228 48650 54711 52901 53081 37995 26946 41529 41076 40130 47631 42365 47093 51239 44893 49440 48868 56829 40689 49873 54602 50576 50433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124940000 22828 3299 21401 42927 34524 34524 1 9606 Homo sapiens 0.07092756661154453 RIGVPSATEIIK Unmodified 1282.7609 0.76088593 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 1 3 0 1 49.258 49.335 3 0.00066817 13825 20230619_1882_Aki_TMTPro18x_K_F3 95.346 16.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22829 1748 21402 42928 34525 34525 1 9606 Homo sapiens 0.1308159255706869 RIHGVGFK Unmodified 912.52937 0.52936985 2204 B2R4C1;P62899;H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899-2;B8ZZK4 RPL31 60S ribosomal protein L31 yes no 0 0 1 5.5 0.5 1 1 36.359 36.435 3 0.00038848 8132 20230619_1886_Aki_TMTPro18x_K_F6 147.06 103.99 125030 86685 110580 112550 121330 152890 135400 129010 182620 103270 109830 95745 111310 84574 105210 121920 126410 97045 115390 79627 113740 112040 125820 150910 137080 132750 180200 105710 116080 97296 113270 89597 108340 120480 120540 92545 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 244050000 22830 2204 21403 42929;42930 34526 34526 1 9606 Homo sapiens 0.06960634436711644 RIHLELR Unmodified 935.56648 0.56648364 1493;3990 A0A384P5U2;P39687;H0YN26;Q6PKH8;Q08AJ6;Q1AHP8;H7BZ09;Q53F35;Q92688-2;Q92688 ANP32A;ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member B no no 0 0 1 3 0.816 1 1 1 35.53 35.584 3 0.014147 7806 20230619_1882_Aki_TMTPro18x_K_F3 95.531 47.682 157780 145650 153720 165090 163710 171730 189980 178160 207940 121510 137570 115160 110650 96445 141360 128870 137930 86281 145980 133460 156720 165270 169880 173350 190510 180110 207680 125780 143200 116720 115300 101740 142930 126670 131640 82590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86081000 22831 1493;3990 21404 42931;42932;42933 34527;34528 34528 2 9606 Homo sapiens 0.09612305982466296 RIHMVYSK Oxidation (M) 1048.5488 0.54878467 33 A0A024QZD5;P08621-2;P08621;P08621-3;M0QYR1 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 1 1 4.5 0.5 1 1 32.073 32.143 4 0.093953 6305 20230619_1883_Aki_TMTPro18x_K_F4 54.776 29.882 47186 31765 33744 31869 86398 137420 57989 70346 159530 18338 25704 25190 22922 20926 27335 22302 22435 21072 43481 29113 36234 33502 85416 129260 63092 74971 150970 21909 32507 25173 23768 21783 27420 22343 21504 20032 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21028000 22832 33 21405 42934;42935 34529 34529 13 1 9606 Homo sapiens 0.0264522266527365 RIHSDTFASGGER Unmodified 1431.6855 0.68548916 4025 Q59FT7;B7Z9N9;B7Z3S5;A8K6K3;Q15750-2;Q15750 MAP3K7IP1;TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes no 0 0 1 5.5 0.5 1 1 29.082 29.135 4 0.0012308 5376 20230619_1885_Aki_TMTPro18x_K_F5 86.803 65.028 10502 7620.3 11217 11655 10385 10577 13721 13055 14825 15757 13971 18735 16708 13645 12072 12583 21980 21673 9709.9 7011.7 11327 11424 10932 10833 13673 13241 15017 15861 14522 18678 16753 14204 12904 13168 20933 20489 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18895000 22833 4025 21406 42936;42937 34530 34530 1 9606 Homo sapiens -0.013086166413359024 RIIDDSEITK Unmodified 1188.635 0.63501672 3696;5 P61326;F5H6P7;F5H3U9;A0A023T6R1;Q96A72;F5H6N1 MAGOH;MAGOHB;FLJ10292 Protein mago nashi homolog;Protein mago nashi homolog 2 no no 0 0 1 4 0 1 44.226 44.27 3 3.1494E-05 11391 20230619_1883_Aki_TMTPro18x_K_F4 143.22 62.621 101870 62123 70085 95693 82460 133460 85171 99655 183660 116450 127830 222650 185570 192900 88185 295550 318870 435610 93801 57212 74226 94257 85386 131150 88706 104600 179120 120230 136770 220220 183530 205400 105300 302390 303670 411830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147070000 22834 3696;5 21407 42938 34531 34531 1 9606 Homo sapiens 0.048244609809898975 RIIDDSEITKEDDALWPPPDR Unmodified 2480.2183 0.21833222 3696;5 P61326;F5H6P7;F5H3U9;A0A023T6R1;Q96A72;F5H6N1 MAGOH;MAGOHB;FLJ10292 Protein mago nashi homolog;Protein mago nashi homolog 2 no no 0 0 2 4.5 0.5 1 1 55.154 55.193 4 1.1360999999999999E-36 15925 20230619_1885_Aki_TMTPro18x_K_F5 225.3 205.04 47705 41868 49082 52901 47301 56243 54043 57159 57926 60076 59940 58925 63963 55266 57537 58564 60544 58412 44142 38412 49748 52563 49478 56628 54243 58398 58897 60515 61575 59742 64850 57303 58790 58798 57884 55489 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162910000 22835 3696;5 21408 42939;42940 34532 34532 1 9606 Homo sapiens 0.03743178268041447 RIIEAEESR Unmodified 1101.5778 0.57783619 2566 B4DPK2;Q9NVH1-3;Q9NVH1;Q9NVH1-2;B4DGD5;B3KTC6 DNAJC11 DnaJ homolog subfamily C member 11 yes no 0 0 1 2.5 0.5 1 1 33.122 33.186 3 0.00085627 6940 20230619_1881_Aki_TMTPro18x_K_F2 104.79 67.239 51040 41523 43130 52107 67181 58358 61902 58944 70242 53756 70128 66977 68584 56672 58762 65597 71347 61035 47133 38103 44873 51826 67635 58591 62950 60052 71018 55034 71857 67085 69577 59257 60653 65510 68071 58058 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55399000 22836 2566 21409 42941;42942 34533 34533 1 9606 Homo sapiens 0.031110384952853565 RIILEAEK Unmodified 970.58113 0.58113065 911 C9J931;Q6NZ61;A8K005;A0A090N900;Q15382 RHEB GTP-binding protein Rheb yes no 0 0 1 7 0 1 43.516 43.595 3 0.001087 10753 20230619_1887_Aki_TMTPro18x_K_F7 119.75 0 200140 169760 181290 167880 182040 222390 202370 190550 263720 81277 95981 60543 63568 55745 157490 88173 86346 42200 184960 155420 185690 170540 189900 220020 204620 193960 257820 87755 104890 62518 70410 59306 154170 85754 82997 40730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88421000 22837 911 21410 42943 34534 34534 1 9606 Homo sapiens 0.09466333339935318 RIILLAEGR Unmodified 1039.6502 0.65021327 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 1 3.5 0.5 1 1 45.732 45.792 3 4.7054E-05 12223 20230619_1882_Aki_TMTPro18x_K_F3 133.23 70.889 178100 177510 173970 162440 172240 205240 186500 180250 223850 64851 58941 55111 57467 47753 108120 67479 64044 48635 164880 162330 176990 166020 179610 203780 188280 182810 218840 71741 68270 56274 61148 50527 106390 66578 61596 46450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 219550000 22838 1439 21411 42944;42945 34535;34536 34535 2 9606 Homo sapiens 0.13197417359515384 RIILLVK Unmodified 853.61131 0.61130857 3630 P52209-2;P52209;B4E2U0;K7EM49;K7EMN2;K7EPF6 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 1 7.5 0.5 1 1 50.908 50.985 3 0.0075032 13958 20230619_1888_Aki_TMTPro18x_K_F8 85.265 1.6506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22839 3630 21412 42946;42947 34537;34538 34538 2 9606 Homo sapiens 0.17864736795797853 RILDAAGANLK Unmodified 1140.6615 0.66150624 1451 A0A384N605;U3KQ56;Q9UBQ7;Q5M7Z5 GRHPR Glyoxylate reductase/hydroxypyruvate reductase yes no 0 0 1 2.5 0.5 1 1 46.477 46.555 3 0.00030861 12874 20230619_1881_Aki_TMTPro18x_K_F2 105.56 64.567 230190 167390 195420 247420 232000 275030 238530 246460 291470 205390 253850 216860 200520 189900 230860 191940 237720 218390 212440 153950 202290 243460 238580 275200 241740 252690 292040 210310 259680 218860 207930 196840 234380 194480 227250 207210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 352120000 22840 1451 21413 42948;42949 34539 34539 1 9606 Homo sapiens 0.09680194662973918 RILDEIEEHNIK Unmodified 1507.7995 0.79945628 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;C9J2Q4;H7C2Y0 SEPT2 Septin-2 yes no 0 0 1 5 0.816 1 1 1 50.566 50.628 4 1.1054E-07 14262 20230619_1883_Aki_TMTPro18x_K_F4 167.05 126.53 129530 107510 115480 132950 135450 222290 138020 147650 296380 177500 169910 213090 223880 183760 158160 229040 241090 279960 119680 98634 118980 133240 140140 216070 143760 156720 287610 179250 182790 213620 223780 193020 166960 232030 230140 265220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 651440000 22841 3910 21414 42950;42951;42952 34540 34540 1 9606 Homo sapiens 0.06586853400949622 RILEDQEENPLPAALVQPHTGK Unmodified 2454.2867 0.28668655 1052 A0A0K0K1K7;O95336 PGLS 6-phosphogluconolactonase yes no 0 0 1 5.5 0.5 1 1 51.615 51.691 4 3.6313E-17 14582 20230619_1886_Aki_TMTPro18x_K_F6 161.47 150.27 83177 70298 72758 88240 67279 73843 72842 80696 84107 90586 94363 101940 104250 96883 76408 103970 102830 129300 76848 64500 74776 87443 70503 75931 73529 82249 85501 91346 96783 102780 104830 100480 79807 105690 98319 122450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 302310000 22842 1052 21415 42953;42954 34541 34541 1 9606 Homo sapiens 0.1177146763861856 RILELDQFK Unmodified 1160.6554 0.65535823 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 1 1.5 0.5 1 1 53.454 53.468 3 0.00093556 15766 20230619_1880_Aki_TMTPro18x_K_F1 102.53 53.79 9956500 9102600 8862600 8583900 9852600 12977000 10296000 10281000 12960000 4673500 3959900 3073600 3629200 3315700 6352100 4957400 4583000 3293800 9204900 8328400 9110000 8774600 10191000 12725000 10431000 10536000 12668000 4993900 4472300 3211400 3849200 3496900 6305600 4867200 4393200 3150800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1618499999.9999998 22843 150 21416 42955;42956 34542;34543 34542 2 9606 Homo sapiens 0.08145676431445281 RILHCLGLAEEIQK Unmodified 1678.9189 0.91885991 1174 P53004;A0A140VJF4 BLVRA Biliverdin reductase A yes no 0 0 1 2 0 1 51.152 51.197 4 7.1561E-05 14988 20230619_1881_Aki_TMTPro18x_K_F2 98.942 70.774 41029 33417 34473 44778 35879 40177 42239 44668 47500 43616 47259 52755 51939 47645 37966 66841 67226 68760 37887 30686 35650 44213 37351 41071 42388 45306 48074 44414 48725 53003 52260 50312 40627 66870 64049 65283 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233990000 22844 1174 21417 42957 34544 34544 1 9606 Homo sapiens 0.1065572375400734 RILNVPQELYEK Unmodified 1500.83 0.83002813 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 1 1 0 1 53.223 53.223 3 0.00014189 15642 20230619_1880_Aki_TMTPro18x_K_F1 108.17 71.476 122250 108630 109520 106920 63173 76635 80129 82271 87277 132890 120190 114410 141620 108790 113290 164570 133160 128820 113000 99436 111580 107830 69839 80007 80171 85053 90042 130940 122640 116870 142440 115380 117090 162320 127180 122750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116910000 22845 3833 21418 42958 34545 34545 1 9606 Homo sapiens 0.09964631785987876 RILSKPIEVQVGGR Unmodified 1550.9257 0.92565985 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 2 5.5 0.5 1 1 44.636 44.72 4 0.0002525 11538 20230619_1886_Aki_TMTPro18x_K_F6 95.538 81.875 83650 79237 86559 87180 103560 110840 100290 98582 108450 89783 86415 85723 89624 71486 84152 85903 84954 69850 77448 72582 87945 87727 106090 110030 101550 101310 109130 91120 89847 86726 91082 74970 85716 85209 81171 66569 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216860000 22846 1002 21419 42959;42960 34546 34546 1 9606 Homo sapiens 0.17223404696869693 RIMLFTNEDNPHGNDSAK Oxidation (M) 2073.9538 0.95380145 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 1 1 6 0 1 42.101 42.195 4 0.00010939 10473 20230619_1886_Aki_TMTPro18x_K_F6 92.307 80.616 101150 90162 82839 116230 122260 106130 97300 111430 104140 127490 125510 141720 112810 119620 106370 143000 145530 157990 93444 82733 86417 115050 123020 108290 99822 113900 106710 128340 127320 142430 115440 125260 110650 144050 138950 149850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 568360000 22847 150 21420 42961 34547 34547 81 1 9606 Homo sapiens -0.040217299665982864 RIMLFTNEDNPHGNDSAK Unmodified 2057.9589 0.95888683 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 1 6.5 0.5 1 1 44.12 44.207 4 1.2540999999999999E-23 11322 20230619_1886_Aki_TMTPro18x_K_F6 198.96 181.09 428810 321130 359960 385570 351900 400790 356950 448850 394020 522880 503740 518460 507730 452420 422420 524310 548760 530990 395770 294650 371370 384420 366610 405230 361240 456870 404340 523940 511850 524150 514220 472610 438570 525830 523700 504330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 926050000 22848 150 21420 42962;42963 34548;34549 34548 2 9606 Homo sapiens -0.027774261040121928 RINDEIER Unmodified 1043.536 0.53597137 186 A0A024R240;P50148;G9FP35 GNAQ Guanine nucleotide-binding protein G(q) subunit alpha yes no 0 0 1 2 0 1 32.283 32.344 3 0.0033057 6636 20230619_1881_Aki_TMTPro18x_K_F2 93.111 45.151 112100 79258 105840 100490 97559 94502 109990 117830 139300 117270 135620 162530 151850 137710 133680 146780 169780 166460 103520 72781 107850 99719 102280 96583 111130 118760 140030 119930 140200 162040 153700 143300 138310 148430 162070 157910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93225000 22849 186 21421 42964 34550 34550 1 9606 Homo sapiens 0.015944828067631533 RINVELSTK Unmodified 1058.6084 0.60840804 1111 A0A0S2Z4Z0;Q96PK6;Q59GV2;A0A0S2Z567;Q96PK6-2 RBM14 RNA-binding protein 14 yes no 0 0 1 3 0.816 1 1 1 42.609 42.672 3 0.0051911 10697 20230619_1883_Aki_TMTPro18x_K_F4 74.562 24.19 120800 93360 107920 116240 144350 135660 130780 130430 156830 99907 115350 103110 115820 107660 122510 108670 115910 97160 111560 85682 111270 115760 146570 135640 133420 132790 156470 102830 120270 104780 118580 110900 124010 108620 110830 92473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206390000 22850 1111 21422 42965;42966;42967 34551 34551 1 9606 Homo sapiens 0.08144816880303551 RIPEFSSFVVR Unmodified 1335.7299 0.72992016 2038 A8K4A8;Q6PI48;A0A3B3IS01;A0A3B3IT01;A0A3B3ISK7;A0A3B3ITS3;A0A3B3IS54;A0A3B3IT89 DARS2 Aspartate--tRNA ligase, mitochondrial yes no 0 0 1 5 0 1 53.057 53.129 3 0.00086312 15086 20230619_1885_Aki_TMTPro18x_K_F5 93.336 54.188 64722 55903 59860 68236 71060 65286 71648 71089 84321 66835 66611 55808 67666 70428 78425 75852 66564 65896 59831 51274 61416 67866 72860 66415 72584 72116 84443 67493 69184 57725 69621 72392 78891 75603 63798 62696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55017000 22851 2038 21423 42968 34552 34552 1 9606 Homo sapiens 0.07548439242827953 RIPIPELEAR Unmodified 1192.6928 0.69280637 2339 Q96CP5;B3KM34;O75439;G3V0E4;Q9UG64;B3KQ85;B4DM90;A8K1E9 PMPCB;DKFZp586I1223 Mitochondrial-processing peptidase subunit beta yes no 0 0 1 7.67 0.471 1 2 47.676 47.75 3 0.00037944 12573 20230619_1888_Aki_TMTPro18x_K_F8 111.52 67.13 132550 112400 112750 135270 128240 139170 160180 154090 182650 164760 163570 157860 170580 144150 158610 187110 179950 161490 122440 103090 116580 134790 132870 140790 160270 156680 184000 165760 168990 160170 173330 151400 162820 185830 171840 153730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 227250000 22852 2339 21424 42969;42970;42971 34553;34554;34555 34554 3 9606 Homo sapiens 0.10416767697074647 RIPLAEWESR Unmodified 1255.6673 0.6673199 3533 P31930 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 0 0 1 7.5 0.5 1 1 46.818 46.886 3 4.1153E-07 12202 20230619_1888_Aki_TMTPro18x_K_F8 154.15 100.4 186270 174230 188010 207090 208590 242650 243570 248910 272530 197050 199590 208570 227430 187390 221410 230840 232630 229900 172410 159720 191320 206930 216070 242770 244390 252430 272890 202390 209550 210580 230960 196320 225920 231200 222450 218380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 433420000 22853 3533 21425 42972;42973 34556;34557 34557 2 9606 Homo sapiens 0.04971293174639868 RIPQSTLSEFYPR Unmodified 1592.8311 0.83109076 1233 A0A140VK65;P21281;B4DFM5;B4DQI9 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes no 0 0 1 4 0 1 50.164 50.199 3 0.01426 14025 20230619_1883_Aki_TMTPro18x_K_F4 66.215 47.386 138090 86142 110700 123000 105090 117060 134470 138950 131870 178410 220670 241220 264480 217650 179090 210510 267920 274720 127290 79251 114730 121100 110430 119300 133890 141510 138160 179980 224190 241150 264450 225010 188670 215170 255530 260230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 345280000 22854 1233 21426 42974 34558 34558 1 9606 Homo sapiens 0.05838846154892963 RIPSGAFEDLENLK Unmodified 1587.8257 0.82567103 4302 Q92626;C9J4I9;H7C1W1;Q92626-2;H7C300 PXDN Peroxidasin homolog yes no 0 0 1 7 0 1 57.137 57.193 3 8.4547E-06 16662 20230619_1887_Aki_TMTPro18x_K_F7 116.36 83.626 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22855 4302 21427 42975 34559 34559 1 9606 Homo sapiens 0.05527122572402732 RIPSIVSSPLNSPLDR Unmodified 1749.9737 0.97373226 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 1 4.5 0.5 1 1 53.056 53.101 3 2.1249E-14 15408 20230619_1883_Aki_TMTPro18x_K_F4 175.19 154.24 130860 123420 129450 131960 119670 132300 132370 119930 129180 127400 129360 114940 135470 105180 124570 135440 124790 135650 121100 113020 131480 132630 125390 133540 132660 123640 131820 127990 132910 117000 137470 110490 126940 135590 119480 128800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 291140000 22856 68 21428 42976;42977 34560 34560 1 9606 Homo sapiens 0.1287443382627771 RIPSTDANLPSGGK Unmodified 1411.7419 0.7419414 4681 Q9UL26;Q96IY7 RAB22A Ras-related protein Rab-22A yes no 0 0 1 1 0 1 41.246 41.246 3 0.00077581 10657 20230619_1880_Aki_TMTPro18x_K_F1 86.578 60.459 47512 43029 48880 50386 63710 67973 63370 65689 77206 70387 72350 73660 72393 62033 56726 69854 88864 77207 43973 39444 49777 50521 64986 67356 64332 67360 77673 70993 74447 74220 73180 64797 59797 70446 84633 73296 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48950000 22857 4681 21429 42978 34561 34561 1 9606 Homo sapiens 0.0525401119534763 RIPWTAASSQLK Unmodified 1356.7514 0.75138388 816 A0A087WUN7;H0YJ40;G3V4X6;G3V2S9;Q9GZT3-2;Q9GZT3;H0YJW7;H0YJ07;H0YJU7 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes no 0 0 1 5.5 0.5 1 1 48.417 48.495 3 1.3586E-09 13262 20230619_1886_Aki_TMTPro18x_K_F6 170.63 122.69 401810 437700 381660 322870 475460 703740 501720 491640 768690 80113 82222 68456 81690 48886 190890 68570 67108 71998 372160 399580 390740 340940 489130 677640 511870 505630 738260 104240 116740 69772 88681 52232 184680 69169 65439 68330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 385390000 22858 816 21430 42979;42980 34562 34562 1 9606 Homo sapiens 0.08727824271545614 RIPYAPSGEIPK Unmodified 1326.7296 0.7295858 3284 O60701;O60701-3;O60701-2 UGDH UDP-glucose 6-dehydrogenase yes no 0 0 1 2 0 1 46.574 46.653 3 6.9103E-06 12907 20230619_1881_Aki_TMTPro18x_K_F2 139.78 102.64 377400 337390 374770 406940 461570 518370 463920 446420 496200 472040 505250 506910 527560 447190 507690 527280 553970 598990 349150 309380 382470 406660 472670 514070 468590 461720 504090 476850 519030 511080 536800 467630 519270 532530 529900 568000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 324440000 22859 3284 21431 42981 34563 34563 1 9606 Homo sapiens 0.07929019522998715 RIQDPTEDAEAEDTPRK Unmodified 1969.9341 0.93411186 3369 O96028;A0A7I2YQS5;Q05CW4;A0A7P0P278;O96028-5;O96028-3;H0Y9L4 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 0 0 2 2 0 1 37.862 37.925 4 0.00068126 8875 20230619_1881_Aki_TMTPro18x_K_F2 73.11 56.81 27779 27429 28091 30021 27479 29078 28070 24973 32537 33324 36104 37045 39645 31344 30560 34441 40670 33652 25722 25121 28508 30100 28600 29401 28413 26041 33047 33349 37025 37233 39908 32691 31810 34511 38766 31997 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53177000 22860 3369 21432 42982 34564 34564 1 9606 Homo sapiens -0.012057827057788018 RIQEIIEQLDVTTSEYEK Unmodified 2193.1165 0.11649291 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 1 5.5 0.5 1 1 62.958 63.006 3 5.169E-10 19465 20230619_1886_Aki_TMTPro18x_K_F6 141.23 134.81 525080 424720 454510 559800 508280 487200 561290 514400 590270 559920 597520 630060 640770 518050 624390 675730 559500 622090 484950 389960 468950 553140 524640 498990 563660 525240 599990 565540 614960 632730 651520 546390 631950 673400 536390 591200 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2975299999.9999995 22861 272 21433 42983;42984 34565;34566;34567;34568 34567 4 9606 Homo sapiens 0.06765931916334011 RIQLVEEELDR Unmodified 1398.7467 0.74669243 1095;1096;3746;3083;2862;3405 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;J3KN67;M1VPF4;A0A2R2Y2Q3;A0A494C0P6;D6R904;A0A494C0G0;H0YL80;P09493-3;D9YZV5;P09493-4;Q15657;P09493-10;A0A0K0K1I0;P09493-8;Q8TCG4;P09493-9;H0YKX5;P09493;D9YZV4;Q6ZN40;A0A0S2Z4G6;P09493-6;C9IZA2;H0YKP3;B4DTK3;H7BYY1;B7Z596;F5H7S3;Q1ZYL5;P09493-2;B7Z722;D9YZV7;P09493-5;A0A494BZZ2;H0YKJ4;H0YK48;Q59GR8;A0A024R5W6;P09493-7;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A2R8YEU4;Q5TCU3;P07951;V9HW25;CON__Q3SX28;A7XZE4;P07951-2;B4DGC2;P07951-3 TPM3;DKFZp686J1372;TPM3-ROS1;TPM1;TPM4;HEL-S-108;TPM2;HEL-S-273;TPM2b Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor;Tropomyosin alpha-1 chain;Tropomyosin alpha-4 chain;Tropomyosin beta chain no no 0 0 1 2.5 0.5 1 1 48.01 48.085 3 1.5086E-09 13554 20230619_1881_Aki_TMTPro18x_K_F2 189.33 158.41 + 568140 379790 449490 531200 556830 680060 655860 694360 824560 618030 641440 707890 757270 602200 612200 770670 641930 783350 523840 349210 468780 525780 573590 676280 660460 706060 822600 631750 672130 711110 762090 633730 627660 771960 614890 743370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2611800000 22862 1095;2862;3083;1096;3746;3405 21434 42985;42986 34569;34570 34569 2 9606 Homo sapiens 0.06326895338111171 RIQLVEEELDRAQER Unmodified 1882.9861 0.98608786 1095;1096;3746;3083;2862;3405 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;J3KN67;M1VPF4;A0A2R2Y2Q3;A0A494C0P6;D6R904;A0A494C0G0;H0YL80;P09493-3;D9YZV5;P09493-4;Q15657;P09493-10;A0A0K0K1I0;P09493-8;Q8TCG4;P09493-9;H0YKX5;P09493;D9YZV4;Q6ZN40;A0A0S2Z4G6;P09493-6;C9IZA2;H0YKP3;B4DTK3;H7BYY1;B7Z596;F5H7S3;Q1ZYL5;P09493-2;B7Z722;D9YZV7;P09493-5;A0A494BZZ2;H0YKJ4;H0YK48;Q59GR8;A0A024R5W6;P09493-7;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;P67936;V9HW56;A0A2R8Y5V9;A0A2R8YGX3;B4DVY2;B4DTB1;A0A2R8YE05;P67936-2;K7ENT6;A0A2R8YHD2;A0A2R8YEU4;Q5TCU3;P07951;V9HW25;CON__Q3SX28;A7XZE4;P07951-2;B4DGC2;P07951-3 TPM3;DKFZp686J1372;TPM3-ROS1;TPM1;TPM4;HEL-S-108;TPM2;HEL-S-273;TPM2b Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor;Tropomyosin alpha-1 chain;Tropomyosin alpha-4 chain;Tropomyosin beta chain no no 0 0 2 3.5 0.5 1 1 47.672 47.732 4 2.9697999999999996E-52 12942 20230619_1883_Aki_TMTPro18x_K_F4 252.1 221.11 + 204900 198420 198690 197630 241620 239300 240330 275370 289750 231400 210880 175510 219620 171260 207620 236800 216960 198760 189640 181590 202970 200400 247390 239800 243940 277420 289180 234560 220230 180790 223240 180340 212010 234700 207370 189260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2715500000 22863 1095;2862;3083;1096;3746;3405 21435 42987;42988 34571;34572 34572 2 9606 Homo sapiens 0.07991425498630633 RIQQLTEEIGR Unmodified 1341.7365 0.7364621 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 7 0 1 44.75 44.835 3 0.00038999 11246 20230619_1887_Aki_TMTPro18x_K_F7 99.539 55.581 236040 143890 203600 218050 240100 209110 197640 254630 269180 203830 251420 229640 235500 234230 240470 277150 193000 252910 217660 132480 210030 213980 245150 213220 204140 255480 269250 209580 257960 232420 241260 243520 242060 276390 185530 240250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 380390000 22864 3440 21436 42989 34573 34573 1 9606 Homo sapiens 0.07926332403530978 RIQQQTHTYIVTPSR Unmodified 1826.9751 0.97512924 1632 A0A6Q8PG18;A8E632;B3KTW5;M9T4I7;Q6ZN04;Q5U5Q3 MEX3C;MEX3B RNA-binding protein MEX3B;RNA-binding E3 ubiquitin-protein ligase MEX3C yes no 0 0 1 5 0 1 34.6 34.688 4 0.00053877 7428 20230619_1885_Aki_TMTPro18x_K_F5 88.427 69.594 25608 16186 20125 24344 27418 27796 23598 29892 27848 23679 27827 29378 26796 21625 28192 27600 33326 34063 23603 14899 21029 23948 27801 27887 24162 30208 28119 24430 28523 29309 27446 22890 28922 28000 31842 32282 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25633000 22865 1632 21437 42990 34574 34574 1 9606 Homo sapiens 0.09472067915021398 RIQQQTNTYIITPSR Unmodified 1817.9748 0.97479489 1902 A1L020 MEX3A RNA-binding protein MEX3A yes yes 0 0 1 5 0 1 40.987 41.075 3 6.3449E-11 9996 20230619_1885_Aki_TMTPro18x_K_F5 163.2 145.5 45250 32327 38099 46926 49283 49034 45612 45417 59362 47435 54925 50517 52347 39518 52537 55874 53412 46545 41754 29728 39510 46189 50206 49342 46620 46713 59481 47948 56421 50808 53483 41996 53485 55358 51049 44333 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51739000 22866 1902 21438 42991 34575 34575 1 9606 Homo sapiens 0.0985264819519216 RIQYQLVDISQDNALRDEMR Unmodified 2462.2336 0.23360512 2808 Q5T123;Q86Z22;D3DPK5;Q9H299 SH3BGRL3;HEL-S-297 SH3 domain-binding glutamic acid-rich-like protein 3 yes no 0 0 2 6.5 0.5 1 1 52.745 52.819 4 1.4402E-54 14861 20230619_1887_Aki_TMTPro18x_K_F7 271.92 265.15 122710 104540 104450 129920 113220 130960 137700 135920 180660 131680 129120 137000 144170 118340 109390 175460 173740 167630 113350 95903 107930 129110 117720 132450 138670 138430 179420 133560 135570 138290 145090 125720 115760 174750 165570 159320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 681570000 22867 2808 21439 42992;42993 34576 34576 1 9606 Homo sapiens 0.060977665843438444 RISAISVAER Unmodified 1100.6302 0.63020611 4503;4116 Q6P158;B4DKW2;Q6P158-2;Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5;E7EWK3 DHX57;DHX36 Putative ATP-dependent RNA helicase DHX57;ATP-dependent RNA helicase DHX36 no no 0 0 1 1.5 0.5 1 1 37.51 37.54 3 6.326E-05 8995 20230619_1880_Aki_TMTPro18x_K_F1 126.48 67.803 155330 126130 137840 144440 166170 184850 174790 163070 191330 131930 140770 118510 129610 103230 156060 143660 153450 119110 143490 115640 141960 144910 170640 183360 176170 167280 191780 134720 146240 120550 133870 109130 158000 142400 146610 113520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 222960000 22868 4116;4503 21440 42994;42995 34577;34578 34577 2 9606 Homo sapiens 0.08391621628902612 RISAVSVAER Unmodified 1086.6146 0.61455605 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 1 3.67 3.09 1 1 1 34.757 34.773 3 0.00052238 7388 20230619_1888_Aki_TMTPro18x_K_F8 105.17 66.768 606850 502190 571040 592000 719850 802200 726130 728840 834490 379030 418900 342900 369350 271850 528730 394300 450380 291550 560910 460520 585490 593290 736330 793450 734750 740160 825920 401510 447060 348030 385980 289290 529720 389000 430580 278590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 971230000 22869 3811 21441 42996;42997;42998 34579;34580 34580 2 9606 Homo sapiens 0.07471335111836197 RISDLGNK Unmodified 901.49813 0.49812931 3340 O94967-2;O94967;O94967-3;O94967-4;B4DHA1 WDR47 WD repeat-containing protein 47 yes no 0 0 1 1 0 1 38.438 38.438 3 0.066313 9388 20230619_1880_Aki_TMTPro18x_K_F1 49.418 4.3368 66078 47647 70926 74772 82250 86462 70545 70593 87471 79216 86609 84993 82846 73547 81139 56669 112480 81711 61093 43857 71824 73385 84204 86161 72356 73456 88114 79806 88728 85562 84645 75379 84109 58715 107100 77457 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30922000 22870 3340 21442 42999 34581 34581 1 9606 Homo sapiens 0.04344016611935331 RISEIEDAAFLAR Unmodified 1489.7889 0.7888916 2318 B2RDK6;O75477;B4DPN7;B0QZ43 ERLIN1 Erlin-1 yes no 0 0 1 5.5 0.5 1 1 52.852 52.927 3 0.00035795 15185 20230619_1886_Aki_TMTPro18x_K_F6 94.532 64.998 53727 54668 57182 56138 60939 63433 67846 69183 75736 67165 59790 61844 72891 59248 67389 66466 65554 66978 49782 50035 57853 56716 63145 63757 68247 70205 76089 67836 62696 62927 73698 61607 68514 66716 62749 63605 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276470000 22871 2318 21443 43000;43001 34582 34582 1 9606 Homo sapiens 0.06358870746521461 RISEQFTAMFR Unmodified 1384.6922 0.69215444 3748;1486;3381;983;1424;3870;1954 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;B4DMJ5;Q6P602;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;P04350;B4DJ43;B4DE77;B4DFH6;A4UCU2 TUBB3;TUBB2B;TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB4A Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-4A chain no no 0 0 1 5.5 0.5 1 1 52.769 52.843 3 5.343E-09 15145 20230619_1886_Aki_TMTPro18x_K_F6 147.39 133.96 364180 285630 316940 355180 271170 408370 353620 360400 488600 371450 305380 349760 416360 352900 365570 465660 434530 512980 336300 262130 325580 353610 288730 407510 355840 371770 482660 374520 327110 356210 419200 370040 377010 468410 415640 486440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1225600000 22872 983;1424;1486;3748;3870;3381;1954 21444 43002;43003 34583;34584 34584 2 9606 Homo sapiens 0.015196049857195248 RISGLIYEETR Unmodified 1335.7147 0.71466402 2211 B2R4R0;P62805;Q0VAS5;Q6B823 HIST1H4H;HIST1H4A Histone H4 yes no 0 0 1 6.48 1.5 1 1 3 5 11 6 52.671 52.726 3 1.894E-05 11687 20230619_1886_Aki_TMTPro18x_K_F6 141.58 110.71 8893000 7335300 7460700 7966900 6972200 8810400 7888600 8024900 8887800 9124300 9169900 9240500 10341000 9009900 8847000 11081000 10025000 11154000 8212600 6721700 7694500 8007400 7318900 8827200 7934700 8281900 9012800 9167200 9446300 9371200 10448000 9410800 9100300 11099000 9588400 10590000 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 421240000000 22873 2211 21445 43004;43005;43006;43007;43008;43009;43010;43011;43012;43013;43014;43015;43016;43017;43018;43019;43020;43021;43022;43023;43024;43025;43026;43027;43028;43029;43030 34585;34586;34587;34588;34589;34590;34591;34592;34593;34594;34595;34596;34597;34598;34599;34600;34601;34602;34603;34604 34588 20 9606 Homo sapiens 0.06023527654951977 RISTITALGHEGK Unmodified 1381.7678 0.76776223 4397 Q96T23-2;Q96T23;H0YER1;Q96T23-3;H0YCN2 RSF1 Remodeling and spacing factor 1 yes no 0 0 1 2 0 1 40.727 40.8 4 0.085652 10167 20230619_1881_Aki_TMTPro18x_K_F2 42.209 16.55 176940 117210 154070 175460 190620 191700 194240 164950 271630 126490 128250 144440 138980 106830 131080 149790 149870 125740 163240 107860 159080 172510 195250 191980 197810 169480 266170 130760 138910 144560 141150 113700 134560 148440 143050 119770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195260000 22874 4397 21446 43031 34605 34605 1 9606 Homo sapiens 0.09214905437647758 RITCTCEVENRPK Unmodified 1661.7978 0.7977585 1386 P15882;P15882-3;A0A2X0SFY7;A0A494C0V1 CHN1 N-chimaerin yes no 0 0 2 7.5 0.5 1 1 33.319 33.36 4 2.0305E-05 6855 20230619_1888_Aki_TMTPro18x_K_F8 120.21 97.672 103740 76620 93247 98236 97142 105070 89945 84409 104560 130830 136590 122830 135280 117210 106860 155570 161230 133970 95788 70353 95663 97501 100430 105280 91612 88928 107090 129480 138440 124950 136820 123080 112420 154360 153550 127570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78637000 22875 1386 21447 43032;43033 34606;34607 34607 2 9606 Homo sapiens -0.006668469509577335 RITEAEK Unmodified 845.46068 0.46068117 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;B7Z9R6 EZR;HEL-S-105 Ezrin yes no 0 0 1 4.5 0.5 1 1 33.155 33.225 3 0.07511 6824 20230619_1883_Aki_TMTPro18x_K_F4 53.493 16.733 117290 70016 153580 175710 263830 218480 203780 233820 200770 133920 241390 270610 161890 190940 235010 130250 259550 259220 108550 64994 154710 169110 262970 217980 208940 235090 205950 144830 242610 265690 171590 196220 238440 139440 248100 244840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61848000 22876 3456 21448 43034;43035 34608 34608 1 9606 Homo sapiens 0.03176925346326698 RITRPGNTDDPSGGNK Unmodified 1683.8289 0.82885893 1144 C9IYN3;A8K894;V9GYK2;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9-4;Q8WVV9;B7WPG3;Q8WVV9-5;A0A0S2Z610;Q8WVV9-3;Q8WVV9-2;H7BXH8;C9JJZ7 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 0 0 2 7.5 0.5 1 1 31.194 31.248 4 5.3408E-11 5827 20230619_1887_Aki_TMTPro18x_K_F7 158.35 126.08 32651 27497 31590 31521 42622 43795 36150 40543 48848 38227 44307 47628 47038 41507 34416 49175 61643 49116 30189 25207 32338 31671 43225 43290 37223 41560 48839 39066 45794 47728 47366 43407 36796 49248 58630 46697 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 177680000 22877 1144 21449 43036;43037 34609;34610 34609 2 9606 Homo sapiens 0.014297656791313784 RITSPLMEPSSIEK Oxidation (M) 1602.8287 0.8287075 1160 A0A109NGN6;P28066;Q5U0A0 PSMA5 Proteasome subunit alpha type-5;Proteasome subunit alpha type yes no 0 1 1 7.5 0.5 1 1 46.272 46.335 3 1.8779E-05 12052 20230619_1888_Aki_TMTPro18x_K_F8 124.16 94.474 165050 125280 146840 178260 180550 201460 168190 163960 396070 148940 168770 168360 189090 157890 143660 182770 183850 178310 152410 115160 151370 175850 185100 201040 177060 169760 380670 152580 184570 169770 190320 164520 149310 182910 175480 169420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 249840000 22878 1160 21450 43038;43039 34611;34612 34612 711 2 9606 Homo sapiens 0.051406296349341574 RITSPLMEPSSIEK Unmodified 1586.8338 0.83379288 1160 A0A109NGN6;P28066;Q5U0A0 PSMA5 Proteasome subunit alpha type-5;Proteasome subunit alpha type yes no 0 0 1 8 0 1 49.374 49.446 3 1.5906E-08 13272 20230619_1888_Aki_TMTPro18x_K_F8 148.7 106.71 89330 73895 76426 89571 91050 115410 90781 89714 258930 110000 89882 93781 127130 91953 98834 124070 106550 102810 82507 67782 79026 89472 93933 114120 96529 93952 247090 110020 101730 95886 127210 96672 101560 122900 101850 97886 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 382210000 22879 1160 21450 43040 34613 34613 1 9606 Homo sapiens 0.06384933497565726 RIVAPPGGR Unmodified 921.55083 0.55083358 1217 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;B4DLZ4;H0YBT4 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 1 3.5 1.12 1 1 1 1 31.221 31.293 3 0.00099491 6009 20230619_1883_Aki_TMTPro18x_K_F4 100.84 63.645 97710 94519 103960 118860 125900 120160 88725 105780 114000 155790 120700 113170 154280 99300 100830 160480 124950 110630 90501 86686 105450 118030 127930 121150 92506 110340 115330 153400 124870 116370 153650 106230 105120 157310 119220 105660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 403990000 22880 1217 21451 43041;43042;43043;43044 34614 34614 1 9606 Homo sapiens 0.08692019465422618 RIVAVTGAEAQK Unmodified 1241.7092 0.70918471 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 1 1.5 0.5 1 1 39.825 39.86 3 0.00013333 9750 20230619_1881_Aki_TMTPro18x_K_F2 109.15 59.106 92321 88227 105410 99670 109050 108610 118170 110860 126320 131240 146170 145630 132070 114910 148370 148420 144470 132130 85557 80834 106000 99890 113080 109260 118900 113660 129020 131940 148460 146160 136020 121260 150370 147720 138180 125710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196940000 22881 1637 21452 43045;43046 34615 34615 1 9606 Homo sapiens 0.09799848863167426 RIVDDWANDGWGLK Unmodified 1643.8056 0.80560429 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2 CANX Calnexin yes no 0 0 1 7.5 0.5 1 1 59.181 59.227 3 5.7655E-05 17496 20230619_1888_Aki_TMTPro18x_K_F8 99.909 56.725 62048 46955 54453 65142 50276 61531 67826 61637 79823 66686 66184 71275 77240 61246 65014 84018 75331 79772 57289 43147 55964 64220 53099 62469 67711 63135 80061 67291 69060 71826 77887 64724 67002 83766 72007 75796 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27944000 22882 1700 21453 43047;43048 34616 34616 1 9606 Homo sapiens 0.009453716324287598 RIVDLHSR Unmodified 994.56721 0.56721192 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 1 1.5 0.5 1 1 30.402 30.435 3 0.00087099 6160 20230619_1880_Aki_TMTPro18x_K_F1 123.21 74.412 80769 74599 83670 81246 93362 101600 91423 95134 113740 67977 75070 72135 64800 57618 88958 65677 91964 72540 74767 68332 84881 81811 96169 101070 92976 96891 112920 70361 78423 72576 67658 60338 90060 66334 87827 68898 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42769000 22883 3892 21454 43049;43050 34617;34618 34617 2 9606 Homo sapiens 0.06971100631517402 RIVEGILK Unmodified 926.5913 0.59130141 1399 A0A8I5KUS5;A0A384MDL3;Q15370;Q15370-2;B8ZZU8;I3L0M9;A0A0B4J296 TCEB2 Transcription elongation factor B polypeptide 2 yes no 0 0 1 2 0 1 47.254 47.329 3 0.0017949 13211 20230619_1881_Aki_TMTPro18x_K_F2 100.57 30.615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22884 1399 21455 43051 34619 34619 1 9606 Homo sapiens 0.12506941065191768 RIVEQDTMPPK Oxidation (M) 1328.6758 0.67583567 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;Q5S4N1;B4E132;B4E010 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 1 1 6 0 1 37.413 37.489 3 0.0050705 8528 20230619_1886_Aki_TMTPro18x_K_F6 74.53 57.461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22885 1018 21456 43052 34620 34620 580 1 9606 Homo sapiens 0.024644790289357843 RIVEQDTMPPK Unmodified 1312.6809 0.68092105 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;Q5S4N1;B4E132;B4E010 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 1 6 0 1 40.63 40.723 3 0.0087001 9824 20230619_1886_Aki_TMTPro18x_K_F6 63.164 33.356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22886 1018 21456 43053 34621 34621 1 9606 Homo sapiens 0.037087828915673526 RIVLVDDSIVR Unmodified 1283.7561 0.75613491 2042 Q53H22;A8K4H7;Q06203;Q59G63 PPAT Amidophosphoribosyltransferase yes no 0 0 1 8 0 1 48.304 48.371 3 0.0006172 12942 20230619_1888_Aki_TMTPro18x_K_F8 95.401 67.539 22537 19223 20756 22232 20126 23558 19990 25224 26884 25903 25712 24407 28528 22409 25378 30958 29097 30287 20831 17622 21230 22230 20980 23759 20396 25654 26958 26095 26547 24796 28869 23644 26098 30916 27812 28769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233920000 22887 2042 21457 43054 34622 34622 1 9606 Homo sapiens 0.1256070841429846 RIWNNVTR Unmodified 1057.5781 0.57811096 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A140T954 VARS Valine--tRNA ligase yes no 0 0 1 6.5 0.5 1 1 36.731 36.799 3 0.0081813 7981 20230619_1887_Aki_TMTPro18x_K_F7 76.827 42.866 257850 177680 222220 241690 271830 285200 277350 275820 354350 192400 204550 194550 193310 160080 210520 171720 230250 183350 237920 163300 229560 239340 278670 284840 281550 280190 350140 199280 216410 196290 198540 166930 214620 173180 219780 174190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 131290000 22888 725 21458 43055;43056 34623;34624 34624 2 9606 Homo sapiens 0.05162503005794861 RIYDETQGR Unmodified 1136.5574 0.5574351 1763 A0A8I5KW02;J3KTL8;A0A8I5KRS9;A6NHR9-3;A6NHR9-2;A6NHR9;A0A2R8YCU7 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 0 0 1 4 0 1 31.244 31.308 3 0.0025652 6040 20230619_1883_Aki_TMTPro18x_K_F4 88.056 50.712 24688 18763 21712 21644 37188 32848 29889 32197 36743 25542 27149 32521 27909 24347 29169 22307 37196 28925 22796 17208 22527 21776 37159 32371 30760 32740 36642 26396 28383 32391 28539 25278 30037 22847 35454 27433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12264000 22889 1763 21459 43057 34625 34625 1 9606 Homo sapiens -0.005381321645245407 RIYIPLPEEAAR Unmodified 1426.7932 0.79324869 422 I3L4J1;A0A024R705;Q9UN37;Q9UF30;Q9NXK5 VPS4A;DKFZp434E0418 Vacuolar protein sorting-associated protein 4A yes no 0 0 1 8 0 1 50.543 50.619 3 3.9075E-07 13764 20230619_1888_Aki_TMTPro18x_K_F8 157.5 116.41 60565 54133 59414 60320 48319 54045 53882 56672 65126 63409 70260 65233 70023 58311 64464 76221 68185 73388 56027 49601 60281 60358 51242 55210 54399 57906 65905 63778 71796 65952 71198 61327 65924 76113 65239 69715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125290000 22890 422 21460 43058 34626 34626 1 9606 Homo sapiens 0.09692379960097242 RIYIPLPEPHAR Unmodified 1460.8252 0.82521752 195 A8K5D8;A8K4G7;A0A024R2C5;O75351 VPS4B Vacuolar protein sorting-associated protein 4B yes no 0 0 1 4 0 1 45.04 45.084 4 2.5993E-05 11796 20230619_1883_Aki_TMTPro18x_K_F4 106.49 91.825 46885 33858 43403 46657 43482 55039 47420 50151 61574 55231 51299 50396 56335 49757 47271 53442 56598 54915 43294 31116 44408 46162 45352 54877 48027 51692 61520 55424 53321 51352 56930 51544 48775 53715 54051 52149 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35362000 22891 195 21461 43059 34627;34628 34628 2 9606 Homo sapiens 0.113237924339046 RKADATSSQDSELER Unmodified 1691.8075 0.80745479 2198 Q0P685;B1APR7;Q99504-2;Q99504-4;Q99504-5;Q99504-3;Q99504 EYA3 Eyes absent homolog;Eyes absent homolog 3 yes no 0 0 2 3 0 1 30.992 31.078 4 5.059500000000001E-25 6014 20230619_1882_Aki_TMTPro18x_K_F3 226.74 182.55 27686 22085 29699 23496 33275 31808 28535 29604 24736 30000 35949 27155 25390 21779 29005 19033 23851 16851 25612 20237 30008 23746 34095 31505 28959 30391 25876 30193 35842 27521 26403 22496 29089 19091 22822 16054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23779000 22892 2198 21462 43060 34629 34629 1 9606 Homo sapiens -0.010776641402117093 RKADGYNQPDSK Unmodified 1377.6637 0.66369108 2265;3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH35;B4DMD1;Q7Z334;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 HNRNPR;HNRPR;DKFZp686A13234;DKFZp686O0665;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 0 2 7.5 0.5 1 1 32.319 32.367 3 0.047006 6478 20230619_1888_Aki_TMTPro18x_K_F8 64.121 30.235 3097.4 3345.3 5579.2 5275 10450 9315 8240 7889.8 4619.3 4679.9 8979.6 8545.8 5569.8 5797.2 7086.2 4150.1 7589.3 4165.6 2888.8 3075 5531.6 5218.2 10375 9081.3 8326.3 8071.9 5079.2 5014.7 8860 8407.9 5869.4 5973.8 7189.2 4210.8 7232.8 3968.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8357800 22893 3254;2265 21463 43061;43062 34630 34630 1 9606 Homo sapiens -0.010034213898961752 RKAEADPQAIPK Unmodified 1322.7306 0.73064844 1245 A0A140VKC4;P51608-2;A0A075BPP5;D6QZ43;C6KG44;E1B2J3;E9LUH3;D9ZNA4;D5L9I5;D3YJ43;D0UU70;C6KG45;E9LUH4;P51608 MECP2 Methyl-CpG-binding protein 2 yes no 0 0 2 8 0 1 36.586 36.573 4 0.0039174 8129 20230619_1888_Aki_TMTPro18x_K_F8 75.088 36.213 24869 17815 23270 23604 31437 28306 32254 28579 35634 27324 32787 33141 27119 20024 31416 26218 33585 29885 22965 16365 23893 23425 31981 28285 32559 29153 35961 27862 33537 32929 28045 21430 31959 26469 32087 28360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23011000 22894 1245 21464 43063 34631 34631 1 9606 Homo sapiens 0.08219233891873046 RKAEEDPEAADSGEPQNK Unmodified 1969.8977 0.89772636 4628 Q9NYB0;A0A590UJT3 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 yes no 0 0 2 1.5 0.5 1 1 34.041 34.069 4 1.618E-13 7355 20230619_1881_Aki_TMTPro18x_K_F2 153.95 126.25 26492 18333 26432 30759 34205 32185 30551 28942 39814 30041 37055 37983 34820 27540 31621 27184 44198 34440 24472 16893 26990 30034 34787 32362 31296 29838 39890 30561 38050 37827 35456 28749 32873 27747 42099 32670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63256000 22895 4628 21465 43064;43065 34632;34633 34633 2 9606 Homo sapiens -0.048426596024910395 RKAEFEEQNVR Unmodified 1404.711 0.71097563 2761 C9JUJ0;Q9UFW8 CGGBP1 CGG triplet repeat-binding protein 1 yes no 0 0 2 5 0.816 1 1 1 33.307 33.367 4 2.9674E-09 6899 20230619_1885_Aki_TMTPro18x_K_F5 187.85 157.52 69551 59947 63861 62816 85851 89768 87817 86933 96618 80577 86796 81137 87410 66015 83107 72776 86203 65814 64290 54906 65677 63594 87458 88692 88673 88799 97500 81810 89512 81836 88930 68979 84687 72687 82307 62659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107270000 22896 2761 21466 43066;43067;43068 34634 34634 1 9606 Homo sapiens 0.024808578811189363 RKAEPYETSQGK Unmodified 1392.6997 0.69974224 1737 Q86UE8;Q86UE8-2;Q86UE8-3;D3DU05;B4DUC2;A0A804HJZ9;A0A804HKF1;J3KRK0;A0A804HJX3;A0A804HK10;A0A804HIB4 TLK2 Serine/threonine-protein kinase tousled-like 2 yes no 0 0 2 7.5 0.5 1 1 33.397 33.436 4 1.466E-05 6880 20230619_1888_Aki_TMTPro18x_K_F8 137.16 103.9 43371 23081 52637 54064 69170 70969 48129 67192 55622 47755 70080 64724 61496 57406 68989 25789 66556 53618 40087 21410 52937 52214 69920 70337 50065 68325 56783 49819 70827 64654 63403 57795 69635 28142 63614 50679 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18302000 22897 1737 21467 43069;43070 34635;34636 34636 2 9606 Homo sapiens 0.019100357869774598 RKDDSYFDR Unmodified 1200.5523 0.55234972 4550 Q9HCD5;Q5JY17 NCOA5 Nuclear receptor coactivator 5 yes no 0 0 2 6 0 1 34.963 35.016 4 0.0012921 7627 20230619_1886_Aki_TMTPro18x_K_F6 104.95 66.318 97934 92243 109510 115180 146160 140290 151180 132140 133550 107590 115770 82146 94591 71292 113090 69837 75169 53833 90731 84599 110870 114760 148760 139810 151520 134930 136260 109310 118530 84249 97973 73862 112340 69479 72140 51379 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42560000 22898 4550 21468 43071 34637 34637 1 9606 Homo sapiens -0.039904360271521 RKDPELWGSVLLESNPYR Unmodified 2158.1171 0.11710203 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 2 2.5 0.5 1 1 57.351 57.375 4 3.4654E-38 17536 20230619_1881_Aki_TMTPro18x_K_F2 245.74 220.15 224780 191160 220120 208760 153300 207900 211690 187060 223790 259150 210060 233300 260960 189490 275640 251100 203810 222260 207870 175160 222950 209480 166390 209820 210480 194560 227040 257200 218670 236350 265100 200300 275940 249830 195830 211340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 457720000 22899 826 21469 43072;43073 34638 34638 1 9606 Homo sapiens 0.08436816146695492 RKEDEVEEWQHR Unmodified 1639.7703 0.77028142 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;B7Z9R6 EZR;HEL-S-105 Ezrin yes no 0 0 2 3 0.816 2 2 2 35.581 35.635 4;5 6.843E-10 7807 20230619_1882_Aki_TMTPro18x_K_F3 187.44 154.71 349920 274840 349460 392840 453600 436340 481200 469040 495430 495170 481720 461400 511350 416530 468060 492040 531880 478370 323480 252600 356860 387500 463030 438720 483900 477550 503580 497940 496100 468460 518820 435260 480340 492450 507910 454700 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 751270000 22900 3456 21470 43074;43075;43076;43077;43078;43079 34639;34640;34641;34642 34641 4 9606 Homo sapiens -0.02401290895340935 RKEEIEAQIK Unmodified 1242.6932 0.6932003 3123 J3KN29;O00233;F5H5V4;F5GX23;O00233-2;F5H7X1;O00233-3 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes no 0 0 2 6.67 0.471 1 2 40.514 40.59 3;4 0.0021867 9738 20230619_1886_Aki_TMTPro18x_K_F6 91.701 33.268 178710 140960 180200 181720 235710 216120 221930 213080 218310 211070 235270 183780 205500 159290 230130 178260 187930 145690 165230 129400 183740 180630 239650 215960 224460 217810 223280 212580 239020 187110 211660 166170 230950 177230 179930 138880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 309810000 22901 3123 21471 43080;43081;43082 34643;34644 34643 2 9606 Homo sapiens 0.08156142626262408 RKEELAEALK Unmodified 1185.6717 0.67173657 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57;A4FS09 MCM4 DNA replication licensing factor MCM4 yes no 0 0 2 7.5 0.5 1 1 43.463 43.508 4 0.00031049 10669 20230619_1887_Aki_TMTPro18x_K_F7 119.76 43.109 148220 93765 101660 116840 103030 138430 114890 123500 183770 164430 169220 195460 226370 207960 121350 295540 274330 253700 136500 86130 107270 116360 107690 137940 117280 128270 182730 165060 176810 197630 224540 218570 134640 292690 260860 241480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271040000 22902 471 21472 43083;43084 34645 34645 1 9606 Homo sapiens 0.08632757597547425 RKEEQLSSYEDK Unmodified 1510.7264 0.72635092 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7;Q32P42;E7EN38 RAD50 DNA repair protein RAD50 yes no 0 0 2 4 0.816 1 1 1 39.005 39.068 4 3.3126E-05 9155 20230619_1883_Aki_TMTPro18x_K_F4 125.53 89.871 190830 155550 198880 211570 263380 246150 252240 247460 253140 281800 359500 329060 315890 262390 307610 296430 329330 308120 176510 142870 202370 209480 267730 246390 255060 253630 262080 284270 361730 329750 323280 274670 314080 298070 314740 292610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 301900000 22903 4309 21473 43085;43086;43087 34646 34646 1 9606 Homo sapiens -0.008583201123201434 RKEEWER Unmodified 1031.5148 0.514842 2587 E7ERS3;B4DTK7;Q86VM9;B4DZ24;Q86YU5 ZC3H18;FLJ00419 Zinc finger CCCH domain-containing protein 18 yes no 0 0 2 4.5 0.5 1 1 31.094 31.165 4 0.044891 6090 20230619_1885_Aki_TMTPro18x_K_F5 71.379 45.82 91344 62454 81631 84871 106080 109870 106880 104800 115140 98351 113300 104570 104010 89510 96046 78168 111590 80647 84302 57401 84120 84184 108230 109080 107950 107230 116690 99957 115870 105350 106080 92223 98549 78964 106410 76686 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89105000 22904 2587 21474 43088;43089 34647 34647 1 9606 Homo sapiens 0.00034517497897468274 RKEPPEDVAQR Unmodified 1323.6895 0.6895119 454 A0A024R7I5;Q9NXH9-2;Q9NXH9;A8K8L2 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes no 0 0 2 4.33 0.471 2 1 30.486 30.557 3;4 0.00051179 5877 20230619_1885_Aki_TMTPro18x_K_F5 103.46 82.684 32547 20319 30344 31822 35633 37845 33074 33685 50032 43297 46095 39426 49238 36830 38237 43306 43957 43746 30034 18714 31092 31253 36552 37708 34019 34948 49841 43152 47550 40132 49597 38450 39419 43426 42001 41546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140650000 22905 454 21475 43090;43091;43092 34648;34649 34649 2 9606 Homo sapiens 0.04061472852413317 RKGDMDELEK Oxidation (M) 1235.5816 0.58160094 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;Q6MZR8;A8K7A6;Q68EN4 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 1 2 3 0 1 35.011 35.072 4 0.032489 7576 20230619_1882_Aki_TMTPro18x_K_F3 58.511 41.632 61883 41167 61018 59783 66027 70136 59433 67919 83738 73934 88148 88539 89675 80143 63140 77195 120980 97350 57148 37870 62110 58972 68037 70072 61101 69674 84075 74868 90250 88925 90302 82798 67924 78713 115030 92337 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29311000 22906 1432 21476 43093 34650 34650 915 1 9606 Homo sapiens -0.0267665979317826 RKGEGYSNPNEGATVEIHLEGR Unmodified 2412.1782 0.17819874 3853 Q53GX4;Q2TA84;Q13451;B7Z8G2;Q13451-2 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes no 0 0 2 5.5 0.5 1 1 39.542 39.631 5 2.8332000000000003E-30 9363 20230619_1886_Aki_TMTPro18x_K_F6 199.28 177.16 81216 65173 79533 88742 73861 69955 76679 75202 81815 85825 97179 87307 98887 80817 80533 95309 108010 90689 75077 59861 80877 87425 77153 72315 77360 76799 83689 86201 98971 88398 99993 84355 83803 95250 102960 86249 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 209170000 22907 3853 21477 43094;43095 34651;34652;34653 34652 3 9606 Homo sapiens 0.028596763881978404 RKGPELPLVPVK Unmodified 1331.8289 0.82890592 1897 B2R9I9;A0MNP2;Q96DI7;Q96DI7-2 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes no 0 0 2 4.5 0.5 1 1 47.185 47.245 4 0.030647 12542 20230619_1885_Aki_TMTPro18x_K_F5 50.207 29.306 284420 234320 270270 267320 273540 326270 350100 329340 378440 344650 412930 434930 386310 331160 443520 360740 469210 465610 262900 214810 275850 268150 286110 325500 349380 336680 385030 350220 421190 433800 397860 346690 450940 368170 448660 441140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 262320000 22908 1897 21478 43096;43097 34654 34654 1 9606 Homo sapiens 0.17626462207726945 RKHEEFIATIR Unmodified 1398.7732 0.77318195 2270 B2R9B8;H0YAP0;Q96GY0;A0A994J504;A0A994J7X1 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes no 0 0 2 2 0 2 35.327 35.384 4;5 0.0036289 7835 20230619_1881_Aki_TMTPro18x_K_F2 80.522 52.195 107020 64965 93669 88902 87640 83669 94548 95737 113560 95309 122720 103990 115250 99843 100850 107230 115790 109210 98695 59747 96116 87774 91652 85302 95563 96972 114870 96641 125010 105130 117190 103510 103660 107740 110600 103730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 62032000 22909 2270 21479 43098;43099 34655;34656;34657 34657 3 9606 Homo sapiens 0.08974629020144675 RKLDAEDVIGSR Unmodified 1357.7314 0.73137672 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 2 6.5 0.5 1 1 40.729 40.809 4 0.00025741 9596 20230619_1887_Aki_TMTPro18x_K_F7 105.03 87.777 141000 114990 123470 134850 100620 127190 135940 122680 142970 161100 149650 122890 178880 125560 120560 159550 155250 126920 130240 105450 126630 134470 107430 129090 135240 126710 145640 159590 154260 126670 178690 131350 125730 157860 148010 121000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172320000 22910 3588 21480 43100;43101 34658 34658 1 9606 Homo sapiens 0.06682028540944884 RKLDLNQEEK Unmodified 1271.6834 0.68336389 110 F5H8D7;A0A024R0S8;Q59HH7;P18887;B2RCY5;B4DEB2;B4DTD3;M0QYS5 XRCC1 DNA repair protein XRCC1 yes no 0 0 2 7 0 1 38.207 38.271 4 7.5185E-05 8569 20230619_1887_Aki_TMTPro18x_K_F7 140.39 89.939 109570 93648 109920 102890 141520 143810 128780 133800 155560 139690 150610 144050 151440 127490 150260 141950 157990 128200 101350 85811 112050 103740 144090 142140 131430 137470 156750 141030 154770 145490 154470 132800 153190 141700 150880 122020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74912000 22911 110 21481 43102 34659 34659 1 9606 Homo sapiens 0.05838954620867298 RKLEEEEDGK Unmodified 1231.6044 0.60444487 2724 P11387;B9EG90;A0A7P0T9R7 TOP1 DNA topoisomerase 1 yes no 0 0 2 3 0.816 1 1 1 35.629 35.683 4 7.7381E-05 7850 20230619_1882_Aki_TMTPro18x_K_F3 124.42 51.531 145340 57979 175210 184390 229710 250480 175680 212230 223500 156590 257290 297590 216330 222420 200940 101460 309900 279400 134190 54247 176340 176390 232830 247100 181910 217920 225980 165610 260820 292800 221690 225510 210020 114220 295250 263600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 202900000 22912 2724 21482 43103;43104;43105 34660;34661 34661 2 9606 Homo sapiens -0.0020931740405103483 RKMDETDASSAVK Unmodified 1436.6929 0.6929423 291 Q13148;A0A0A0N0L3;A0A024R4E2;A0A0A0N0N3;A0A087WYY0;A0A087X260;G3V162;B1AKP7;K7EN94;A0A0A0N0M3;A0A087WX29;K7EJM5 TARDBP;TDP43 TAR DNA-binding protein 43 yes no 0 0 2 6 0 1 36.469 36.53 4 4.9156E-06 8167 20230619_1886_Aki_TMTPro18x_K_F6 134.9 90.287 103130 90872 107900 105140 133190 110780 112720 121170 134910 123980 130550 106530 119820 84694 116000 97082 131690 86421 95441 83298 109520 105140 135520 111960 115570 123100 136020 124600 133510 108230 122340 88821 118760 96847 125530 82362 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126240000 22913 291 21483 43106 34662 34662 1 9606 Homo sapiens -0.007936451559089619 RKPADLQNLAPGTHPPFITFNSEVK Unmodified 2776.466 0.4660479 2612 B4DWC4;Q6FIC5;Q9Y696;B3KTR3;Q9NVF8 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 0 2 4 0 2 53.815 53.831 4;5 9.8952E-20 15772 20230619_1883_Aki_TMTPro18x_K_F4 160.92 147.32 251100 214570 251410 222910 178840 205330 204630 223180 238530 322850 294410 272420 308680 247530 256750 332330 316440 297800 232250 196520 254060 224440 192310 209500 206170 229360 243730 319230 299850 278050 312040 260710 265700 330440 302060 283280 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1354600000 22914 2612 21484 43107;43108 34663;34664;34665 34665 3 9606 Homo sapiens 0.14887351926518022 RKPASGGLAASSSAPAR Unmodified 1582.854 0.85395147 1414 A0A590UKC9;A0A590UJN8;A8K1E1;A0A384MDZ1;P20585 MSH3 DNA mismatch repair protein Msh3 yes no 0 0 2 6.5 0.5 1 1 30.898 30.963 4 2.11E-13 6157 20230619_1886_Aki_TMTPro18x_K_F6 158.98 138.39 35327 26333 32711 31142 37593 40821 37261 39524 46551 28725 31706 24064 24261 19736 33296 29873 32707 20804 32628 24159 33510 31194 38668 40513 37872 40159 46242 29497 32867 24542 25431 21030 33643 29364 31217 19899 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27230000 22915 1414 21485 43109;43110 34666;34667 34666 2 9606 Homo sapiens 0.08583865272385083 RKPDTIEVQQMK Unmodified 1471.7817 0.78169773 3456;2184 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z437;J7M2B1;Q6PJT4;Q9UK20;Q9UJZ6;Q9UJZ8;Q9UJZ7;B7Z4C7;P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;Q05CU6;Q6PKD3;V9HWC0;P26038;A0A8V8TKR9 EZR;HEL-S-105;EZR-ROS1;MSN;RDX;HEL70 Ezrin;Tyrosine-protein kinase receptor;Radixin;Moesin no no 0 0 2 1 0 1 41.305 41.305 4 0.00020863 10618 20230619_1880_Aki_TMTPro18x_K_F1 108.68 86.882 72734 54751 67896 68652 92825 102480 83234 82456 90261 85283 81944 89194 102940 84080 82443 97562 88353 91913 67185 50258 69754 68618 94201 100590 84687 85669 91285 86190 85428 90191 103400 87619 84603 97473 84503 87346 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 443090000 22916 3456;2184 21486 43111 34668 34668 1 9606 Homo sapiens 0.06467814874440592 RKPDTIEVQQMK Oxidation (M) 1487.7766 0.77661235 3456;2184 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z437;J7M2B1;Q6PJT4;Q9UK20;Q9UJZ6;Q9UJZ8;Q9UJZ7;B7Z4C7;P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;Q05CU6;Q6PKD3;V9HWC0;P26038;A0A8V8TKR9 EZR;HEL-S-105;EZR-ROS1;MSN;RDX;HEL70 Ezrin;Tyrosine-protein kinase receptor;Radixin;Moesin no no 0 1 2 8 0 1 37.445 37.43 3 0.036399 8462 20230619_1888_Aki_TMTPro18x_K_F8 51.774 36.203 15645 12513 15988 19868 20920 20432 16230 15961 21288 17817 20215 23524 25287 17638 18183 25453 28444 21071 14467 11514 16303 19447 21201 20516 16796 16677 21360 18089 21026 23424 25295 18806 19217 25186 27065 20087 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11505000 22917 3456;2184 21486 43112 34669 34669 1357 1 9606 Homo sapiens 0.05223511011809023 RKPEDVLDDDDAGSAPLK Unmodified 1939.9487 0.9486993 1707 B4DY23;A0A7P0TA85;Q54A51;B4DNE1;P35613-2;P35613;A0A087WUV8;P35613-3;P35613-4;A8MZ77 hEMMPRIN;BSG Basigin yes no 0 0 2 5 0 1 46.389 46.466 4 0.033535 12221 20230619_1885_Aki_TMTPro18x_K_F5 49.606 25.564 59344 55629 54334 66245 60324 57850 63447 68814 74522 80857 75819 76974 81570 61131 77218 89606 74496 71283 54886 50996 55762 65927 62222 59424 64151 69856 75405 80915 77995 77791 82798 65098 78516 88530 71281 67911 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154540000 22918 1707 21487 43113 34670 34670 1 9606 Homo sapiens 0.01632289442363799 RKPNAGGSPAPVR Unmodified 1305.7266 0.72656611 3967 Q3KQU3-4;B3KU03;Q6NX58;D3DPS3;Q3KQU3;Q3KQU3-2 MAP7D1;RPRC1 MAP7 domain-containing protein 1 yes no 0 0 2 6 0 1 29.278 29.309 4 0.042669 5528 20230619_1886_Aki_TMTPro18x_K_F6 55.335 40.069 40702 22226 24385 37374 39063 40975 42551 40782 54540 12267 11918 9216.4 10627 10009 18272 10475 21137 7300.3 37433 20505 26432 36504 39550 41129 43005 40928 53042 13915 14177 9555.2 11288 10316 18554 10370 20100 7018.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21833000 22919 3967 21488 43114 34671 34671 1 9606 Homo sapiens 0.08593189188832184 RKPQIICYPETGHYIEPPYFPLCR Unmodified 3033.4993 0.49933864 805 E9KL42;A0A087WT95;Q86TX2;P49753;G3V4F2;B7ZMC1;B4DV16;A1L172;B3KSA0;P49753-2 ACOT2;ACOT1 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial yes no 0 0 2 5 0 1 55.379 55.443 5 1.8318000000000001E-34 16033 20230619_1885_Aki_TMTPro18x_K_F5 210.43 204.46 27534 25192 31353 26325 23115 27452 25966 30238 35256 29375 26671 26802 32499 26005 32673 33074 30975 34872 25508 23069 31375 26539 24760 27745 26328 30660 35045 29665 28031 27309 32983 27242 33130 33221 29681 33089 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87897000 22920 805 21489 43115 34672 34672 1 9606 Homo sapiens 0.0639289438254309 RKPSVPDSASPADDSFVDPGER Unmodified 2328.0982 0.09821708 1094 A0A0S2Z4E4;B2R6S4;A0A0S2Z4Y3;P16333;C9JAB9;P16333-2;C9K098;C9JVV5;C9J869;A0A0S2Z4D7;H7C5C7 NCK1 Cytoplasmic protein NCK1 yes no 0 0 2 4 0 1 43.844 43.888 4 6.0234E-05 11232 20230619_1883_Aki_TMTPro18x_K_F4 85.062 80.612 28525 19770 26628 24749 29709 29957 28768 24802 33667 33697 33746 35624 36392 28502 29292 41605 37144 39658 26336 18154 27237 24656 30578 29790 29209 25942 34040 33643 34740 35840 36712 30336 30414 41449 35480 37678 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88844000 22921 1094 21490 43116 34673 34673 1 9606 Homo sapiens -0.01270810005689782 RKQDEWIK Unmodified 1101.5931 0.59309232 1976 A6NJA2;B2RD79;P54578-2;P54578-3;P54578;D3DUG9 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 2 8 0 1 39.475 39.464 4 0.024225 9293 20230619_1888_Aki_TMTPro18x_K_F8 71.223 52.911 53417 36268 40657 52167 47705 61473 49637 54870 77297 53967 60974 53718 55116 48524 58887 58189 67287 50919 49243 33356 42547 51460 49205 61260 50779 56471 76438 54641 63021 54409 56647 50717 60267 57924 64185 48500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76422000 22922 1976 21491 43117 34674 34674 1 9606 Homo sapiens 0.046359500831158584 RKQEEQMETEQQNK Unmodified 1804.8374 0.83737471 3306 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 2 3.5 0.5 1 1 32.876 32.94 4 1.8837E-08 6744 20230619_1882_Aki_TMTPro18x_K_F3 153.39 129.91 26747 10584 34089 36128 38094 52954 28677 41782 46618 31492 55499 76036 57539 67461 41952 24996 83232 92550 24709 9922.1 34096 34539 39106 51921 30070 43162 46752 33772 56722 74754 58082 67618 45110 29641 79301 87155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60800000 22923 3306 21492 43118;43119 34675 34675 1 9606 Homo sapiens -0.032850484665232216 RKTEEVTALR Unmodified 1201.6779 0.67788459 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;A0A024R0V9;H0YHT2;H0YIM6 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 0 2 8 0 1 33.886 33.882 4 0.0062412 7057 20230619_1888_Aki_TMTPro18x_K_F8 72.817 20.976 74085 59932 88873 87351 100710 93847 89601 74906 74997 81005 98955 86423 80579 71775 104420 57887 77775 66492 68613 55089 89190 86013 103140 94001 90567 78069 78204 81699 99575 86968 83920 73782 104020 59052 74594 63104 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35187000 22924 4170 21493 43120 34676 34676 1 9606 Homo sapiens 0.08511275829050646 RKVDWLTEK Unmodified 1173.6506 0.6506072 2105;3883;543 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;B4DNH2;J3KSZ0;J3QL43;B4DKP9;J3KTN0;J3QL52;Q14240;Q14240-2;E7EQG2;Q9NZE6;B4DJX6;Q96B07;P38919;A0A024R8W0;I3L3H2 EIF4A1;EIF4A2;EIF4A3;DDX48 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 0 0 2 2.5 0.5 1 1 45.537 45.616 3 0.026039 12126 20230619_1882_Aki_TMTPro18x_K_F3 70.942 36.054 143730 131400 156900 156040 157680 169420 174970 179160 190550 202960 180570 166720 194480 155450 178980 198240 199720 180360 133100 120460 158300 155790 164110 170560 175940 182930 193000 202700 186260 170550 197260 163050 183520 197480 190760 171570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 710270000 22925 2105;3883;543 21494 43121;43122 34677 34677 1 9606 Homo sapiens 0.07072792288704477 RKVEEAFNCR Unmodified 1307.6405 0.64045322 3637 Q9BW75;Q96CV8;P52888;K7EP46;B4DU96 THOP1 Thimet oligopeptidase yes no 0 0 2 2 0 1 37.345 37.406 4 0.0029413 8674 20230619_1881_Aki_TMTPro18x_K_F2 88.187 81.75 56581 50324 60097 57038 67001 55853 62180 61858 55024 67670 72580 60836 67786 52022 66934 70595 69096 54858 52375 46119 60814 57074 68735 56775 62795 62933 57224 67824 73365 61824 69245 54942 68213 69761 65991 52323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140850000 22926 3637 21495 43123 34678 34678 1 9606 Homo sapiens -0.0010613870820179727 RKVESLWPIFR Unmodified 1429.8194 0.81940386 3574 P41223;P41223-2 BUD31 Protein BUD31 homolog yes no 0 0 2 8 0 1 53.875 53.946 4 1.6177E-06 15252 20230619_1888_Aki_TMTPro18x_K_F8 162.68 88.224 113100 91289 98551 113690 76686 97463 90026 100200 123230 118140 99131 103630 125000 109660 83670 135300 134690 115830 104460 83767 101080 112760 81947 99831 91080 102660 122770 118030 103950 106080 124890 114240 88899 134310 128240 110290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278980000 22927 3574 21496 43124 34679 34679 1 9606 Homo sapiens 0.12168693922194507 RLAAEATEWQR Unmodified 1329.6789 0.67894722 2119 A8K8B2;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3;A0A024RCU9 SRPK1 SRSF protein kinase 1 yes no 0 0 1 6.5 0.5 1 1 41.216 41.288 3 0.0002378 9786 20230619_1887_Aki_TMTPro18x_K_F7 110.8 75.26 67186 49918 63447 62279 66414 64452 71845 70306 70757 80878 81572 61401 87735 61991 64282 73663 78476 67947 62061 45822 64790 61931 68815 65171 72112 71688 72637 80555 83292 63299 88143 64618 66608 73495 74875 64635 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34107000 22928 2119 21497 43125;43126 34680;34681 34681 2 9606 Homo sapiens 0.027294901979757924 RLAAQFIPK Unmodified 1042.6287 0.62874955 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;Q9BZZ5-6;B4DDR3;Q9BZZ5-3;E9PQK6 API5 Apoptosis inhibitor 5 yes no 0 0 1 5.5 0.5 1 1 47.599 47.677 3 0.027445 12894 20230619_1886_Aki_TMTPro18x_K_F6 61.679 52.816 505400 475150 470960 514410 538710 628310 581660 538580 740410 257940 258670 193410 268940 208630 360870 306300 293260 188500 467500 435190 482650 517850 555930 624650 588360 549080 724510 274840 288320 200470 278600 219830 361270 299860 280510 180670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 553360000 22929 4478 21498 43127;43128 34682 34682 1 9606 Homo sapiens 0.10914032330788359 RLAEALPK Unmodified 896.54435 0.54435122 3480 P20290;P20290-2;A0A7I2YQL2;A0A7I2V3T6;A0A7I2V5Y3;D6RDG3;H0Y9Y1 BTF3 Transcription factor BTF3 yes no 0 0 1 1.5 0.5 1 1 41.72 41.758 3 0.0024411 10855 20230619_1880_Aki_TMTPro18x_K_F1 99.815 48.469 692560 522710 634470 616540 707040 754470 731250 682910 934040 719770 760610 678180 742760 652770 586660 879510 853650 697600 639640 479510 650310 616910 729560 750970 741930 703610 932510 724820 786940 690240 751760 685820 615610 869170 813100 665080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 312110000 22930 3480 21499 43129;43130 34683;34684 34683 2 9606 Homo sapiens 0.09194081514033314 RLAELSDYR Unmodified 1121.5829 0.58292157 1111 A0A0S2Z4Z0;Q96PK6;B4DNG4 RBM14 RNA-binding protein 14 yes no 0 0 1 6.5 0.5 1 1 41.142 41.225 3 0.0046303 9769 20230619_1887_Aki_TMTPro18x_K_F7 77.662 42.438 40661 31513 39810 46151 44720 57450 52376 48075 66823 41879 42304 37419 42057 36219 45912 46403 47162 42256 37579 28973 40641 45519 46353 56979 52771 49605 66197 42588 44526 38188 43134 37937 46689 46236 45078 40197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47248000 22931 1111 21500 43131;43132 34685 34685 1 9606 Homo sapiens 0.026993423579142473 RLAEQQDLQR Unmodified 1255.6633 0.66329715 4288 Q8WXH0-2;Q8WXH0;D4YW74;G3V5X4;A0A0C4DGK3;Q8WXH0-7;Q7Z362;Q8WXH0-13;Q8WXH0-3;Q6MZP0;A0A1W2PRN9 SYNE2;TROPH;DKFZp686J1895;DKFZp686M09200 Nesprin-2 yes no 0 0 1 4.5 0.5 1 1 32.084 32.154 3 0.0038765 6372 20230619_1883_Aki_TMTPro18x_K_F4 73.499 34.717 72638 57734 95204 86101 116620 102570 104130 111880 96382 88573 109900 104190 93284 69530 115000 87719 100060 83668 67327 53086 95071 84848 118800 102710 105540 112990 99138 91182 111410 103930 96669 73848 115580 87730 95768 79571 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45823000 22932 4288 21501 43133;43134 34686 34686 1 9606 Homo sapiens 0.04569203680944156 RLAEQVSSYNESK Unmodified 1509.7423 0.74233534 774 A0A0A0MRI1;A0A024RDS7;Q8IXQ4-3;Q8IXQ4-2;Q8IXQ4 GPALPP1;KIAA1704 GPALPP motifs-containing protein 1 yes no 0 0 1 7 0 1 41.29 41.362 3 6.2542E-11 9817 20230619_1887_Aki_TMTPro18x_K_F7 179.5 133.71 47412 38213 47492 49734 50686 51557 57077 56346 57927 64115 76964 83000 74722 62241 70665 81770 83103 86247 43837 35081 48299 49309 52517 52115 57223 57449 59730 64918 78017 82704 76134 65917 72678 82072 79414 81859 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39412000 22933 774 21502 43135 34687 34687 1 9606 Homo sapiens 0.007853861245848748 RLAETQEEISAEVAAK Unmodified 1743.9003 0.90029254 4715 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 0 0 1 3.5 0.5 1 1 50.86 50.912 3 1.3475E-14 14378 20230619_1883_Aki_TMTPro18x_K_F4 182.18 145.88 276100 223460 245620 253200 242330 328240 271810 286830 371950 304980 283690 299110 348840 290230 234480 366630 349730 360370 255060 204860 252110 254290 253500 325150 275430 296260 369670 307300 298010 303690 348640 303760 247530 366440 333580 342310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1210300000 22934 4715 21503 43136;43137 34688;34689 34689 2 9606 Homo sapiens 0.05809840593133231 RLAETQEEISAEVSAK Unmodified 1759.8952 0.89520716 4568 Q9NQ29-3;Q9NQ29;A8MYV2;Q1W6G4;Q53G47;Q9NQ29-2;D3DU41;B8ZZ10;B8ZZ09 LUC7L Putative RNA-binding protein Luc7-like 1 yes no 0 0 1 3 0 1 49.932 50.007 3 1.6117E-14 14136 20230619_1882_Aki_TMTPro18x_K_F3 179.81 153.94 73008 52727 61914 61282 55439 69021 67551 61801 79578 94129 90091 92785 98671 84039 68882 105020 100480 107360 67374 48371 63725 61304 58527 69041 67788 64508 80887 93348 92290 93944 99042 88097 72514 105210 95882 101920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118930000 22935 4568 21504 43138 34690 34690 1 9606 Homo sapiens 0.045655367305244 RLAGGDWFTSR Unmodified 1264.6313 0.63126874 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 1 3.5 0.5 1 1 46.757 46.817 3 1.4313E-06 12506 20230619_1883_Aki_TMTPro18x_K_F4 160.16 128.32 279610 234140 230060 245090 249220 277700 261650 278630 311540 286240 289720 277150 304570 257240 262980 352220 335130 317620 258210 214470 238190 247180 257900 278450 264690 284700 313690 288640 298810 281320 308480 271000 272620 350210 319830 302100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 305790000 22936 1860 21505 43139;43140 34691;34692 34692 2 9606 Homo sapiens 0.009538359978023436 RLAGTSGSDK Unmodified 990.50942 0.50942227 253 A0A024R3M1;Q9P016;Q9P016-2 THYN1 Thymocyte nuclear protein 1 yes no 0 0 1 8 0 1 31.352 31.362 3 0.091213 6103 20230619_1888_Aki_TMTPro18x_K_F8 32.062 3.3192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22937 253 21506 43141 34693 34693 1 9606 Homo sapiens 0.013787939154326523 RLAHCEELR Unmodified 1182.5928 0.59277475 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 1 5 0 1 28.194 28.267 3 0.00025576 5061 20230619_1885_Aki_TMTPro18x_K_F5 123.63 71.63 15952 11714 14313 15708 17776 22362 14322 17430 20205 16788 17314 17936 19489 15444 14317 22381 26724 16228 14728 10762 14737 15614 18136 21982 14832 18118 20135 17046 17991 18083 19586 16373 15374 22012 25377 15517 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17335000 22938 817 21507 43142 34694;34695 34694 2 9606 Homo sapiens 0.008782070916140583 RLAPEYEAAATR Unmodified 1346.6943 0.69426293 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DJ98;A0A8I5KYJ6;A0A8I5KXE2;A0A8I5KP58;A0A8I5QJM1;H7BZJ3;A0A8I5QKT6 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 1 5.5 1.12 1 1 1 1 36.737 36.806 3 2.1073E-07 8172 20230619_1885_Aki_TMTPro18x_K_F5 163.27 140.39 580870 458050 504930 498840 598320 642420 610720 614610 682790 653780 698110 717620 761830 633390 665830 796720 786970 772060 536410 419820 520600 502560 614510 638270 617320 630690 692210 660630 718440 722980 770950 664760 686150 796250 751700 733620 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3955299999.9999995 22939 2389 21508 43143;43144;43145;43146 34696;34697;34698;34699;34700 34697 5 9606 Homo sapiens 0.03478356995174181 RLASSVLR Unmodified 900.5505 0.55049923 1679 J3QR09;J3KTE4;Q53G49;A0A7I2YQG2;P84098;A0A7I2V638;A0A7I2V4U6;A0A7I2V2L0;A0A7I2V512 RPL19 Ribosomal protein L19;60S ribosomal protein L19 yes no 0 0 1 6 0.816 1 1 1 35.507 35.579 3 0.005029 7813 20230619_1886_Aki_TMTPro18x_K_F6 93.166 41.82 207110 204290 159250 109490 306640 667510 236780 229070 590290 78617 91887 112600 107310 94356 79706 101130 108540 115370 191390 186250 168110 125600 308540 621810 253040 259840 559780 90182 118360 112240 108040 98269 83245 102260 103620 109400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 323780000 22940 1679 21509 43147;43148;43149 34701;34702;34703 34702 3 9606 Homo sapiens 0.09624599745575324 RLATVEER Unmodified 972.53524 0.53524309 3016 Q12824;Q12824-2;G5E975;Q9H836;A0A0G2JRV3;C9JTA6;A0A2R8Y5N5;B4DRT1;B4E117;A0A0G2JSE9;Q86WI8;A0A2R8YEE8;A0A0U1RRB8;Q86WI7;A0A0U1RQQ2;B5MCL5;Q86WI6 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes no 0 0 1 3.5 0.5 1 1 30.455 30.535 3 0.005029 5780 20230619_1883_Aki_TMTPro18x_K_F4 91.085 53.609 70984 50433 60192 73529 74143 85794 74102 77169 113360 86389 103970 107900 108130 89863 74602 116550 141160 116520 65500 46382 62339 72469 76043 85590 75912 79679 112780 87536 107260 108000 108710 94693 80342 116560 134250 110760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88459000 22941 3016 21510 43150;43151 34704 34704 1 9606 Homo sapiens 0.04787688157705361 RLAVYQAGASEGAER Unmodified 1576.7958 0.79576789 2790 CON__Q03247 yes yes 0 0 1 6.5 0.5 1 1 36.97 37.036 3 2.2021E-33 8333 20230619_1886_Aki_TMTPro18x_K_F6 255.71 231.29 + 25774 20716 25969 25918 29450 35734 31641 32939 45946 44831 68451 92082 49061 56708 56755 99575 111250 154140 23832 19011 26423 25876 30423 35315 32232 34172 46830 46087 68484 90152 51233 61914 60840 102230 106210 145670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 192250000 22942 2790 21511 43152;43153 34705;34706 34705 2 9606 Homo sapiens 0.030441836271165812 RLCQENQWLRDELANTQQK Unmodified 2429.187 0.18698928 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5;G3V2P7 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 2 8 0 1 51.017 51.094 4 2.1464999999999998E-19 13933 20230619_1888_Aki_TMTPro18x_K_F8 181.41 140.89 66218 61926 57838 62344 55829 61285 63399 64386 74560 66988 61790 55575 68219 55364 68359 76809 61888 64404 61220 56684 59445 62956 58383 62162 63835 65630 74821 67231 64252 56983 69407 58257 69202 76124 59294 61293 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 507430000 22943 3808 21512 43154 34707 34707 1 9606 Homo sapiens 0.02956326752973837 RLCQFHR Unmodified 1015.5134 0.51340221 1173 J3QT28;A0A140VJF3;O43684-2;O43684;B4DDM6 BUB3 Mitotic checkpoint protein BUB3 yes no 0 0 1 5 0 1 28.815 28.888 3 0.0061229 5296 20230619_1885_Aki_TMTPro18x_K_F5 90.986 63.732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22944 1173 21513 43155 34708 34708 1 9606 Homo sapiens 0.006266049281521191 RLDCLEQK Unmodified 1060.5335 0.53352853 4484 Q9C0F1;Q9C0F1-2 CEP44 Centrosomal protein of 44 kDa yes no 0 0 1 6 0 1 40.998 41.092 3 0.0031743 9990 20230619_1886_Aki_TMTPro18x_K_F6 90.696 24.425 295500 221780 249060 329280 254880 256370 306090 329580 386430 271510 305780 329940 337350 300880 292200 352570 383770 318920 272740 203960 257430 322610 265690 266400 308110 330190 385490 279420 319040 331440 341400 313870 303280 351450 365860 303510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285210000 22945 4484 21514 43156 34709 34709 1 9606 Homo sapiens 0.005683110774270972 RLDECEEAFQGTK Unmodified 1581.7093 0.70932065 180 V9HWJ8;A0A024R203;P61289;P61289-3;P61289-2;K9J957;Q6FHK7;B3KQ25;K7ESG5;K7ENH2;K7EMD0;K7EPX6;K7EKR3 HEL-S-283;PSME3 Proteasome activator complex subunit 3 yes no 0 0 1 3 0 1 44.22 44.293 3 3.2013E-06 11521 20230619_1882_Aki_TMTPro18x_K_F3 135.02 106.21 125730 97104 128080 130690 132190 135990 139550 139910 152550 149560 145040 110850 159420 108100 133620 145050 134410 125600 116240 89191 129980 129300 137090 137210 140710 142900 154430 149460 149540 114340 160820 113700 136430 144050 128530 119530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104280000 22946 180 21515 43157 34710 34710 1 9606 Homo sapiens -0.058265639898081645 RLDEDLAAYCR Unmodified 1380.6456 0.64559818 160 A0A024R1T5;P09543-2;P09543;K7ERC4;K7EN66;C9K0L8;K7ERZ0 CNP 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes no 0 0 1 4.5 0.5 1 1 44.912 44.973 3 5.4541E-09 11711 20230619_1883_Aki_TMTPro18x_K_F4 176.29 141.4 134330 106540 139610 146400 122970 147660 157630 155180 172320 171890 181290 167530 198000 171370 168700 201800 196870 207720 124220 97873 141200 144580 130050 149330 157410 158470 175080 172710 186210 170520 200190 178270 173810 202540 188170 197190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 226360000 22947 160 21516 43158;43159 34711 34711 1 9606 Homo sapiens -0.029498796362304347 RLDEEEEDNEGGEWER Unmodified 1990.8141 0.81405631 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4 EIF3C Eukaryotic translation initiation factor 3 subunit C yes no 0 0 1 1 0 1 40.803 40.803 3 1.2579E-42 10437 20230619_1880_Aki_TMTPro18x_K_F1 277.34 258.97 280080 206650 245020 234340 228430 271400 217090 297240 281650 305040 303560 300550 331240 293490 295220 350130 322200 318270 258550 189520 251460 235030 238660 272210 221890 301770 284360 307640 311580 305190 335560 305880 302630 349030 307990 302650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 795500000 22948 12 21517 43160 34712 34712 1 9606 Homo sapiens -0.14171815770191643 RLDEELEDAEK Unmodified 1345.6361 0.63613893 3908 Q15008;Q15008-4;B3KT66;Q15008-3;Q15008-2;C9J7B7;C9J0E9 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 1 2 0 1 46.79 46.865 3 2.3317E-06 13018 20230619_1881_Aki_TMTPro18x_K_F2 148.68 120.71 230290 193590 201400 253720 249310 260300 252890 255250 324130 273870 298700 270930 342000 243670 260510 355130 336690 285320 212760 177710 208020 251270 255330 262620 256920 261630 325060 275810 309260 274560 343570 258250 271040 350890 321050 271920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215350000 22949 3908 21518 43161 34713 34713 1 9606 Homo sapiens -0.022853694407558578 RLDEYTQEEIDAFPR Unmodified 1880.8905 0.89045614 4469 Q9BYD1;H0YAX3;E5RJI7 MRPL13 39S ribosomal protein L13, mitochondrial yes no 0 0 1 2 0.816 1 1 1 54.112 54.139 3 2.0149000000000002E-25 16184 20230619_1881_Aki_TMTPro18x_K_F2 233.14 223.89 67839 58110 67167 73882 70009 87032 80703 79472 84228 85211 83767 81509 100960 84485 86960 100800 91739 97476 62742 53321 68389 73476 72847 86803 80863 81859 85630 85713 86710 83059 101820 87925 89014 100810 87769 92597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309830000 22950 4469 21519 43162;43163;43164 34714 34714 1 9606 Homo sapiens -0.014753474122471744 RLDFDYK Unmodified 955.47633 0.47633123 4100 Q99961;Q9UQD4;Q6FGM0;Q99961-2;Q99961-3;M0R0I3;Q8IZ09;B7Z1K6;D3DRJ2;B7Z7M7;Q3V639;Q7Z376;Q3V638;B7Z7W3;Q99962 SH3GL1;SH3GL2;DKFZp686B23205 Endophilin-A2;Endophilin-A1 yes no 0 0 1 7.5 0.5 1 1 46.467 46.555 3 0.011869 11989 20230619_1887_Aki_TMTPro18x_K_F7 96.027 67.92 313020 292230 306270 320250 304140 401230 394870 350550 457210 426110 456840 428930 498620 396820 406880 527570 490470 498140 289650 267690 311890 322250 319070 398340 394650 363700 462110 426850 470280 434530 503100 417400 420640 526040 468520 473420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 264180000 22951 4100 21520 43165;43166 34715;34716 34715 2 9606 Homo sapiens -0.003187881366216061 RLDFDYKK Unmodified 1083.5713 0.57129425 4100 Q99961;Q9UQD4;Q6FGM0;Q99961-2;Q99961-3;M0R0I3;Q8IZ09;B7Z1K6;D3DRJ2;B7Z7M7;Q3V639;Q7Z376;Q3V638;B7Z7W3;Q99962 SH3GL1;SH3GL2;DKFZp686B23205 Endophilin-A2;Endophilin-A1 yes no 0 0 2 2 0 1 44.349 44.431 4 0.076111 11903 20230619_1881_Aki_TMTPro18x_K_F2 56.432 26.177 207900 165900 187600 188290 208350 233860 228230 224960 237200 216570 215920 213140 228640 169770 218500 238570 232260 220250 192050 152100 192600 188980 215350 232830 229230 230170 240290 219220 223110 215140 232320 180280 223230 237550 222010 209430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70017000 22952 4100 21521 43167 34717 34717 1 9606 Homo sapiens 0.032851453345756454 RLDHDLK Unmodified 895.48756 0.48756462 2693 G5E9V7;G5E9V6;B7Z637;Q8IUR7-6;Q8IUR7-3;Q8IUR7-7;Q8IUR7-2;Q8IUR7;C9J2I1;B7Z979;B7Z5P0 ARMC8 Armadillo repeat-containing protein 8 yes no 0 0 1 6 0 1 34.173 34.22 3 0.052936 7329 20230619_1886_Aki_TMTPro18x_K_F6 62.2 17.753 41526 25679 34025 33179 37825 35867 48979 39584 47396 41382 42627 39741 43341 34659 35044 31448 46711 41756 38282 23600 35243 32938 39240 36163 48652 40251 48163 41684 43968 40228 43813 35783 36400 32247 44546 39569 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10732000 22953 2693 21522 43168 34718 34718 1 9606 Homo sapiens 0.035640339575252256 RLDHLQR Unmodified 936.52535 0.52534711 3751 P78318 IGBP1 Immunoglobulin-binding protein 1 yes no 0 0 1 8 0 1 27.559 27.589 3 0.019221 4814 20230619_1888_Aki_TMTPro18x_K_F8 77.282 58.958 14218 10146 15800 14928 19564 19999 16108 16668 21528 15205 16201 18119 17822 15264 17362 16375 20464 15991 13148 9332.3 15966 14745 19924 19759 16610 17217 21401 15549 16959 18160 18123 15894 17826 16423 19519 15209 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5369600 22954 3751 21523 43169 34719 34719 1 9606 Homo sapiens 0.05454544942995199 RLDIQNK Unmodified 885.50321 0.50321468 4390 Q96QR8 PURB Transcriptional activator protein Pur-beta yes yes 0 0 1 8 0 1 38.239 38.225 3 0.028289 8788 20230619_1888_Aki_TMTPro18x_K_F8 71.877 27.5 51847 33955 48529 51925 63021 73757 59418 59067 84335 41653 46016 47102 43259 38011 50279 36646 59592 46410 47856 31257 49818 51210 64305 72544 60848 60887 82839 43293 48915 47255 44613 39445 51433 37443 56836 44026 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35963000 22955 4390 21524 43170 34720 34720 1 9606 Homo sapiens 0.05588320474578268 RLDLDAAK Unmodified 900.50288 0.50288033 828 A0A140VJU5;A0A994J549;A0A087WW40;Q9Y371;Q9Y371-2;Q9Y371-3 SH3GLB1 Endophilin-B1 yes no 0 0 1 6.5 0.5 1 1 42.252 42.337 3 0.017501 10234 20230619_1887_Aki_TMTPro18x_K_F7 70.552 27.731 277080 245800 236920 270460 336160 407130 283130 319970 463900 190960 215400 206190 209600 188050 251200 243690 286890 260590 256040 225210 245740 272860 340670 399230 293960 329280 451590 201010 232420 208300 216350 197510 256610 244940 273970 247420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 235950000 22956 828 21525 43171;43172 34721;34722 34722 2 9606 Homo sapiens 0.04864900754705559 RLDLPIER Unmodified 1010.5873 0.58727866 3468 P17812;A0A3B3IRI2;B4E1E0;A0A8Q3WKZ7;B4DMB5;P17812-2;A0A8Q3WL40;A0A3B3IRQ8;A0A3B3ITF6;A0A3B3ITB8;B7Z9C4;A0A3B3ISY3 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 1 6.5 0.5 1 1 43.755 43.843 3 0.00064371 11151 20230619_1886_Aki_TMTPro18x_K_F6 134.25 93.218 304500 240200 272040 299550 229170 268930 260390 271630 267770 325490 354240 340840 365560 323010 337320 382110 345500 378630 281250 220440 278540 297250 242450 274320 261210 278830 276030 326420 359800 344850 371410 336850 344230 382730 330730 359540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 440550000 22957 3468 21526 43173;43174 34723;34724 34723 2 9606 Homo sapiens 0.08240851571486019 RLDLVHTAALMLDK Unmodified 1594.8865 0.88649715 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 1 3 0 1 60.975 61.004 4 1.9413E-11 18769 20230619_1882_Aki_TMTPro18x_K_F3 142.45 106.81 86238 69435 89207 96876 81459 86813 87851 91870 120910 104690 98746 94599 94400 84335 102540 99647 96229 105340 79756 63792 90290 95432 85420 88661 89252 93857 120390 104850 102150 96139 96899 88150 103760 100220 92195 99956 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19036000 22958 3312 21527 43175 34725;34726 34725 2 9606 Homo sapiens 0.1128493635101222 RLDTLEFK Unmodified 1020.5604 0.56039521 4124 Q6PCB5-2;Q6PCB5 RSBN1L Round spermatid basic protein 1-like protein yes no 0 0 1 8 0 1 48.799 48.865 3 0.0016308 13016 20230619_1888_Aki_TMTPro18x_K_F8 114.86 60.082 78834 61557 75605 73965 66857 66834 73280 76513 87724 86720 94639 79995 94112 74753 82265 97439 99670 100130 72850 56472 76912 73622 70281 68380 74009 77767 88822 86885 96637 81418 95480 78526 84905 97652 95199 95076 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70861000 22959 4124 21528 43176 34727 34727 1 9606 Homo sapiens 0.05093742960286818 RLEAAYLDLQR Unmodified 1346.7306 0.73064844 2886 E5RIW3;Q6FGD7;E5RJD8;O75347;E5RHG6;O75347-2 TBCA Tubulin-specific chaperone A yes no 0 0 1 7.5 0.5 1 1 48.015 48.088 3 5.5011E-07 12686 20230619_1887_Aki_TMTPro18x_K_F7 166.24 121.47 617280 512090 542920 500630 474380 575170 560280 507630 552720 368170 322330 285040 334890 270650 484240 356930 346640 264540 570260 468820 556450 507960 500950 574570 559660 519720 553860 377420 342310 292940 348380 284220 481450 352590 332420 252540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2193100000 22960 2886 21529 43177;43178 34728;34729 34728 2 9606 Homo sapiens 0.07115233891886419 RLEAFEHPNVVR Unmodified 1465.779 0.77899561 660 F8VYH9;F8VTV8;F8VWX7;A0A024RBB6;P11802;F8W1L8;F8VYY1;Q96BE9 CDK4 Cyclin-dependent kinase 4 yes no 0 0 1 7 0 1 39.589 39.654 4 3.4289E-05 9109 20230619_1887_Aki_TMTPro18x_K_F7 121.04 104.9 80546 58151 65535 83865 71194 87263 93776 90350 112720 95355 107340 104020 104200 88027 86449 102840 98385 101420 74309 53469 68046 82581 74232 88000 93786 92240 113460 96392 110200 104690 105610 92107 88972 102990 94040 96331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199910000 22961 660 21530 43179 34730 34730 1 9606 Homo sapiens 0.0647372753178388 RLEAFLTQK Unmodified 1104.6291 0.62914348 1774;3554 A0A8I5KVF6;A0A8I5QJL9;A0A8I5QJ96;A0A8I5KYS7;B4DFY5;A4QPA9;A0A8I5KYB4;Q02750-2;Q02750;A0A8I5KRX5;A0A8I5QJC1;A0A8I5KXN4;A0A8I5QJP8;P36507 MAP2K1;MAP2K2 Dual specificity mitogen-activated protein kinase kinase 1;Dual specificity mitogen-activated protein kinase kinase 2 no no 0 0 1 3.5 0.5 1 1 51.195 51.244 3 0.00059943 14541 20230619_1883_Aki_TMTPro18x_K_F4 112.13 71.778 319170 265010 275100 311090 288820 365400 325830 319450 390770 223190 242720 218520 241030 195580 273170 273480 249180 214110 294820 243000 283620 311070 300480 364210 328270 327010 387930 230940 255870 221590 247570 206570 275880 270270 238410 204120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 460780000 22962 1774;3554 21531 43180;43181 34731;34732 34732 2 9606 Homo sapiens 0.08101407259982807 RLEAGAMVLADR Unmodified 1300.6922 0.69215444 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 1 7.5 0.5 1 1 44.992 45.02 3 2.2873E-05 11480 20230619_1888_Aki_TMTPro18x_K_F8 124.51 95.462 41808 32929 35525 39812 37762 43658 36666 41036 47294 48089 42477 43678 44673 40890 44222 48993 51987 50093 38602 30210 36666 39690 39069 43795 37378 42277 47420 48092 43917 44438 45536 42696 45429 49152 49652 47574 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68091000 22963 1104 21532 43182;43183 34733;34734 34734 2 9606 Homo sapiens 0.05383604985740931 RLEAMLK Unmodified 859.49496 0.49495818 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7 KTN1 Kinectin yes no 0 0 1 2 0 1 45.41 45.492 3 0.007779 12361 20230619_1881_Aki_TMTPro18x_K_F2 105.14 50.727 133170 133600 124020 95538 136740 202320 154490 126270 216500 31452 32329 36206 39773 28098 60202 34936 38178 34159 123240 121980 126850 101170 142040 194710 156420 131740 209070 37472 42239 36343 41366 29634 59499 35038 36714 32468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46772000 22964 380 21533 43184 34735 34735 1 9606 Homo sapiens 0.05959050233582275 RLEASETESFGNEIYTVK Unmodified 2072.0062 0.006214175 2131 A8K946;O43148;O43148-2;B7Z3U8;K7EP06;Q05D80 RNMT mRNA cap guanine-N7 methyltransferase yes no 0 0 1 4.5 0.5 1 1 53.072 53.117 3 1.3141E-18 15092 20230619_1885_Aki_TMTPro18x_K_F5 177.01 157.62 96190 87181 106040 102810 91389 105480 109650 110610 113470 120550 122390 117760 130640 107020 114280 150700 125470 145510 89080 79921 106670 102620 96566 106580 109680 112910 115780 121180 125480 119400 132270 113080 117320 150320 120080 138190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143370000 22965 2131 21534 43185;43186 34736;34737 34737 2 9606 Homo sapiens 0.013091316479858506 RLEEAALR Unmodified 956.54033 0.54032847 4319 Q96A33 CCDC47 Coiled-coil domain-containing protein 47 yes yes 0 0 1 4.5 0.5 1 1 35.089 35.179 3 0.0013469 7626 20230619_1883_Aki_TMTPro18x_K_F4 95.502 44.156 230300 256640 193840 204360 226680 231230 243760 267070 338410 239950 262090 214230 218600 245280 229300 248910 262720 196340 213160 234390 200490 211370 233420 232900 247660 269490 335960 243400 270270 219950 225480 251850 234910 247160 250590 187290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108610000 22966 4319 21535 43187;43188 34738;34739 34738 2 9606 Homo sapiens 0.060319920203255606 RLEEEEAAAEK Unmodified 1273.615 0.61500956 2643 B4E0X4;Q9P041;Q5T280 C9orf114 Putative methyltransferase C9orf114 yes no 0 0 1 1.5 0.5 1 1 38.525 38.557 3 0.0011551 9446 20230619_1880_Aki_TMTPro18x_K_F1 90.884 56.999 45565 30363 41991 48778 58058 57507 53914 52876 77346 53377 68616 71554 69712 71973 52900 73005 76329 75429 42057 27966 43230 47825 58922 57373 55300 54363 77029 54544 70847 71856 70429 74212 55492 73433 72798 71621 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79660000 22967 2643 21536 43189;43190 34740 34740 1 9606 Homo sapiens -0.010853347496322385 RLEEEER Unmodified 959.46722 0.46722311 823 A0A087WVF4;O14646-2;O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes no 0 0 1 1 0 1 27.18 27.18 3 0.024366 4899 20230619_1880_Aki_TMTPro18x_K_F1 79.713 5.4575 24131 22017 29123 27423 33920 34604 28193 32440 29410 26920 34724 33366 28612 31615 28588 15931 32771 29866 22368 20194 29223 27350 34662 34402 28826 33129 30093 27701 35102 33495 29440 31825 29228 17093 31294 28230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16401000 22968 823 21537 43191 34741 34741 1 9606 Homo sapiens -0.014131814929442044 RLEEELR Unmodified 943.50869 0.50869399 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 1 2.5 0.5 1 1 35.378 35.435 3 0.014147 7816 20230619_1881_Aki_TMTPro18x_K_F2 86.011 27.094 249000 196630 219300 230520 310960 318490 297340 291520 348840 288260 347530 376520 327750 286980 345410 338380 387410 361350 229960 180340 226690 231200 315310 314830 302090 299560 352180 294260 356020 375160 336080 301610 353190 340550 370090 343070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 438730000 22969 673 21538 43192;43193 34742;34743 34742 2 9606 Homo sapiens 0.034679992663768644 RLEEFYSK Unmodified 1070.5397 0.53965977 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8 DST Dystonin yes no 0 0 1 7.5 0.5 1 1 45.489 45.548 3 0.0032998 11547 20230619_1887_Aki_TMTPro18x_K_F7 99.855 67.223 58485 47660 52892 59557 59513 67602 60241 57508 75862 55293 63829 62725 62937 61408 64762 72024 74815 71024 54035 43733 54335 59259 61366 67512 61168 59411 75848 56289 66018 63340 64424 63906 66415 72134 71459 67484 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74105000 22970 1693 21539 43194;43195 34744 34744 1 9606 Homo sapiens 0.007211525806042118 RLEEGTEETSETLEK Unmodified 1749.8269 0.82685283 1754 Q08378;A0A8I5KYV8;Q08378-2;A0A8I5KWY9;A0A8I5KSF0;A0A8I5KQH9;A0A8I5KXF8;A0A8I5QKX6;A0A8I5KTE5;A0A8I5KQ98;A0A8I5QJ69;A0A8I5KVX9;A0A8I5KSV3;A0A8I5QKK4;A0A8I5KU25;A0A8I5KW20;A0A8I5KQN2;Q08378-4 GOLGA3 Golgin subfamily A member 3 yes no 0 0 1 1.5 0.5 1 1 42.556 42.596 3 0.0010415 11259 20230619_1880_Aki_TMTPro18x_K_F1 76.341 52.51 22329 16641 18076 20281 20178 24438 24305 24735 28895 27464 29390 24726 29912 20115 24784 21407 23552 19568 20603 15271 18767 20239 20936 24396 24405 25312 29190 27526 30115 25071 30223 20995 25203 21406 22519 18620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58948000 22971 1754 21540 43196;43197 34745 34745 1 9606 Homo sapiens -0.01806752639959086 RLEEIPLIK Unmodified 1109.6808 0.6808447 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 5.67 3.3 1 2 52.088 52.139 3 0.00066424 15260 20230619_1880_Aki_TMTPro18x_K_F1 99.568 19.594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22972 3152 21541 43198;43199;43200 34746;34747;34748 34746 3 9606 Homo sapiens 0.13039150953909484 RLEELLR Unmodified 927.55016 0.55016488 3579 P42285;A8K6I4;B4E3M6;H0YAC4 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 0 1 8 0 1 44.936 44.964 3 0.0015201 11468 20230619_1888_Aki_TMTPro18x_K_F8 107.66 22.453 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22973 3579 21542 43201 34749 34749 1 9606 Homo sapiens 0.0834918002572067 RLEEPEEPK Unmodified 1125.5666 0.5666028 355 A0A024R5S5;O75822;O75822-2 EIF3S1;EIF3J Eukaryotic translation initiation factor 3 subunit J yes no 0 0 1 2 0.707 1 2 1 37.039 37.082 3;4 0.00084441 8521 20230619_1881_Aki_TMTPro18x_K_F2 105.13 69.592 812590 581690 688540 776510 749040 803990 729180 765060 1048200 953920 1042400 1088100 1130400 955130 922320 1189400 1239100 1077700 749850 534410 711080 768360 773480 810040 746390 789380 1049400 958350 1073600 1094200 1141300 1001700 960420 1184500 1181400 1025400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1207100000 22974 355 21543 43202;43203;43204;43205 34750;34751;34752 34751 3 9606 Homo sapiens 0.008842164011412024 RLEEPSLR Unmodified 998.55089 0.55089316 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;O00429-7;H0YI79;A0A994J6A0;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 1 4.5 0.5 1 1 36.215 36.283 3 0.0012441 7953 20230619_1885_Aki_TMTPro18x_K_F5 118.33 40.412 108970 89048 110810 137920 149170 146990 129620 136020 162960 138450 140860 132360 135140 118700 124560 155850 137830 145900 100780 81909 113130 135270 151290 147680 132860 139780 163230 139670 145250 134260 137650 124840 127760 155360 131800 138650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 370220000 22975 3212;3213 21544 43206;43207 34753 34753 1 9606 Homo sapiens 0.05155974674767094 RLEEQAAQHK Unmodified 1208.6262 0.62618337 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 1 5.5 0.5 1 1 31.654 31.711 4 0.029151 6283 20230619_1885_Aki_TMTPro18x_K_F5 61.435 19.434 58885 36527 58859 66990 93918 87971 92061 101450 108410 62317 85256 76659 77079 65099 80397 37298 85739 74816 54367 33717 60370 65384 94613 87638 93397 101610 108410 65566 88160 76770 79086 66121 81738 40180 81907 70703 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28383000 22976 3921 21545 43208;43209 34754 34754 1 9606 Homo sapiens 0.030215321351761304 RLEEQEEDTFR Unmodified 1450.6688 0.66883604 573 A0A024R9G7;Q6PL18;A0A0B4J211 ATAD2 ATPase family AAA domain-containing protein 2 yes no 0 0 1 1 0 1 38.372 38.372 3 4.2532E-17 9347 20230619_1880_Aki_TMTPro18x_K_F1 193.49 157.21 96868 84349 87023 93010 71707 82562 79246 87350 96611 110580 124250 115780 130720 100490 95903 125110 110610 90037 89531 77288 89013 93124 75978 84424 80092 89531 98587 110630 126350 116830 131470 105440 99101 123300 105550 85965 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124550000 22977 573 21546 43210 34755 34755 1 9606 Homo sapiens -0.03847162317924813 RLEESDVLQEAR Unmodified 1443.7318 0.73177065 3189 M0QXU7;Q9UPE4;Q53G69;O43615;M0R301;M0R124 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 yes no 0 0 1 1.5 0.5 1 1 41.529 41.568 3 1.8286E-05 10519 20230619_1881_Aki_TMTPro18x_K_F2 128.9 75.649 187120 128960 175350 161590 172460 225760 196510 185090 227950 209160 218540 221900 232660 183790 175010 247080 214930 215790 172760 118420 179030 161360 180350 222380 197710 192520 230030 210560 225230 223450 234200 194190 181590 245310 205270 205290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 346860000 22978 3189 21547 43211;43212 34756 34756 1 9606 Homo sapiens 0.027654034701527053 RLEEWLGR Unmodified 1057.5669 0.56687757 2037 A8K492;P56192;B4DF61;B4E0E9;P56192-2 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 0 1 4.5 3.5 1 1 47.576 47.605 3 0.00031212 13368 20230619_1880_Aki_TMTPro18x_K_F1 152.34 69.135 174210 148900 162460 165460 131550 160140 171250 177270 191610 207780 205070 226240 243960 193860 215160 260180 246020 281530 161050 136460 165580 165760 140310 162750 171080 180730 194700 208850 211630 227750 246320 204640 221250 261420 235330 267040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199490000 22979 2037 21548 43213;43214 34757;34758 34757 2 9606 Homo sapiens 0.04039680911682808 RLEFENQK Unmodified 1062.5458 0.54580778 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 1 6.5 0.5 1 1 40.064 40.143 3 0.0005611 9582 20230619_1886_Aki_TMTPro18x_K_F6 138.26 68.354 524900 416560 497520 489260 534640 616080 550910 561860 684310 515690 623570 585320 612370 494980 559920 634140 680340 539480 485060 382050 508200 489910 553300 612070 558700 576430 686490 526110 641830 588450 622830 520810 577290 629580 648800 513920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 333670000 22980 1432 21549 43215;43216 34759;34760 34759 2 9606 Homo sapiens 0.01703670812139535 RLEFLYDK Unmodified 1082.576 0.57604528 762 O94979-9;D6REX3;O94979-6;O94979-3;O94979-4;O94979-10;O94979-2;O94979;O94979-8;A0A1S5UZ19;A1LU61;A0A024RDH6;O94979-7;H7BXG7;H0Y8W8 SEC31A;SEC31L1 Protein transport protein Sec31A yes no 0 0 1 1 0 1 51.568 51.568 3 0.0062316 15014 20230619_1880_Aki_TMTPro18x_K_F1 91.658 62.311 221220 189810 191800 209290 214530 266310 233590 233240 286730 198230 181200 160760 177210 140700 187590 198100 198470 183930 204390 173930 197780 210540 221930 264170 235970 239580 284670 201270 190610 164350 181490 148900 191230 197320 189690 174900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290920000 22981 762 21550 43217 34761 34761 1 9606 Homo sapiens 0.03806029477323136 RLEGEDSAR Unmodified 1031.4996 0.49958587 1445 Q6IB91;A0A384MTT2;Q16822;A0A0S2Z430;H0YML5;Q16822-3;A0A0S2Z4C0 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 1 1 0 1 26.865 26.865 3 0.00015416 4820 20230619_1880_Aki_TMTPro18x_K_F1 126.39 65.415 25730 11438 34807 27424 34827 33456 33342 45501 37706 23236 62439 103450 35710 51774 83262 14537 69031 83955 23794 10627 34551 26464 36071 33619 33905 45055 39006 27064 62090 99412 39673 53076 82662 19318 66289 78951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21961000 22982 1445 21551 43218 34762 34762 1 9606 Homo sapiens -0.01490394089955771 RLEGLSK Unmodified 801.47085 0.47085192 2479 Q49AQ3;B4DGC1;H0YI10;F8VXY1;Q8N5B7-2;Q6ZMG9;Q8N5B7;Q6ZMG9-2 LASS5;CERS5;CERS6 Ceramide synthase 5;Ceramide synthase 6 yes no 0 0 1 1.5 0.5 1 1 39.06 39.093 3 0.0055882 9678 20230619_1880_Aki_TMTPro18x_K_F1 109.11 24.612 478490 370680 492560 488070 535700 567140 613980 614760 786360 455780 499050 454480 584240 418830 511970 486950 624740 444660 442410 340390 499870 484390 555100 568500 619560 620400 778800 469710 528950 460630 589870 437130 527850 486040 595410 423450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 424380000 22983 2479 21552 43219;43220 34763 34763 1 9606 Homo sapiens 0.062175330715604105 RLEGQEEEEDNRDSSMK Oxidation (M) 2066.8811 0.88109002 3428 P10645;G5E968;Q86T07 CHGA Chromogranin-A;Vasostatin-1;Vasostatin-2;EA-92;ES-43;Pancreastatin;SS-18;WA-8;WE-14;LF-19;Catestatin;AL-11;GV-19;GR-44;ER-37;GE-25;Serpinin-RRG;Serpinin;p-Glu serpinin precursor yes no 0 1 2 1.5 0.5 1 1 31.764 31.796 4 0.00026366 6732 20230619_1880_Aki_TMTPro18x_K_F1 84.249 75.43 48970 40243 48622 85346 49723 41021 70682 70904 74202 70580 84694 70572 75646 56577 44701 75063 77027 65370 45280 37188 49658 81793 51993 45498 70151 70430 75753 71305 85854 71239 75988 59819 47949 74503 73306 62234 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 200640000 22984 3428 21553 43221;43222 34764;34765 34764 2047 2 9606 Homo sapiens -0.1096752855073646 RLEGQEEEEDNRDSSMK Unmodified 2050.8862 0.88617539 3428 P10645;G5E968;Q86T07 CHGA Chromogranin-A;Vasostatin-1;Vasostatin-2;EA-92;ES-43;Pancreastatin;SS-18;WA-8;WE-14;LF-19;Catestatin;AL-11;GV-19;GR-44;ER-37;GE-25;Serpinin-RRG;Serpinin;p-Glu serpinin precursor yes no 0 0 2 1.5 0.5 1 1 34.508 34.536 4 3.3129E-23 7503 20230619_1881_Aki_TMTPro18x_K_F2 197.28 186.9 103270 92495 116150 188020 102640 91799 157010 160350 149640 179960 167610 144700 168960 137640 97817 163620 180530 123910 95646 85386 117160 180560 108850 101620 154940 159710 153700 179600 170920 148300 169050 143580 105620 161620 171540 118320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 176980000 22985 3428 21553 43223;43224 34766;34767 34767 2 9606 Homo sapiens -0.09723224688104892 RLEGTNVTVNVLHPGIVR Unmodified 1973.117 0.11704245 4006 Q53RX3;Q9HBH5 RDH14 Retinol dehydrogenase 14 yes no 0 0 1 4 0 1 46.731 46.773 4 2.9012E-06 12457 20230619_1883_Aki_TMTPro18x_K_F4 99.34 73.048 27512 21440 23650 28145 29658 27936 31048 31030 29955 30918 31748 29643 33543 25864 29778 32505 30709 29262 25403 19687 24459 27866 30330 28346 31190 31483 30664 31203 32556 30036 33977 27164 30412 32371 29363 27833 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251900000 22986 4006 21554 43225 34768 34768 1 9606 Homo sapiens 0.16940860937324942 RLEHQGIK Unmodified 979.55631 0.55631289 252 Q4G0F5;A0A024R3L9;H0YCI7 VPS26B Vacuolar protein sorting-associated protein 26B yes no 0 0 1 8 0 1 31.149 31.16 3 0.0041727 6031 20230619_1888_Aki_TMTPro18x_K_F8 95.502 40.52 24540 12824 20071 22665 25788 24768 22149 25565 32819 23825 27316 27786 24750 24602 21977 21400 39057 28149 22606 11842 20854 22093 26240 24897 22877 26007 32582 24309 28168 27909 25258 25306 23329 21941 37129 26704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15155000 22987 252 21555 43226 34769 34769 1 9606 Homo sapiens 0.06571698257221215 RLELPEHLK Unmodified 1133.6557 0.65569258 190 A0A024R275;B2RDZ2;Q969G6 RFK Riboflavin kinase yes no 0 0 1 8 0 1 43.801 43.811 4 0.0060892 10966 20230619_1888_Aki_TMTPro18x_K_F8 74.944 21.617 74314 54038 58100 65430 49623 65199 54966 55230 78660 95687 103670 107700 101120 95821 96298 117190 114820 126260 68544 49593 60285 65131 52533 65712 55885 58213 79844 94897 105090 108380 103130 100330 99151 117870 109760 119780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87519000 22988 190 21556 43227 34770 34770 1 9606 Homo sapiens 0.09421096151299935 RLEPQADEGGGGGSGGGGR Unmodified 1712.7826 0.78263702 4551 Q9HCE9-2;Q9HCE9 ANO8 Anoctamin-8 yes no 0 0 1 2 0 1 29.609 29.678 3 1.6654E-08 5608 20230619_1881_Aki_TMTPro18x_K_F2 112.55 108.95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22989 4551 21557 43228 34771 34771 1 9606 Homo sapiens -0.04524299222998707 RLEQELR Unmodified 942.52468 0.52467841 4764 yes no 0 0 1 4.67 0.471 1 2 33.795 33.87 3 0.0096182 7123 20230619_1885_Aki_TMTPro18x_K_F5 89.046 15.722 + 99236 86749 103090 109990 101550 115130 120270 127570 76816 111570 121240 117820 139990 113260 107970 136960 148100 126930 91829 79593 104440 109250 105980 116290 118940 129020 82637 113690 123110 119260 140730 118250 112720 136620 141160 120740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 93099000 22990 4764 21558 43229;43230;43231 34772 34772 1 9606 Homo sapiens 0.05111705503270514 RLEQLGAQR Unmodified 1069.5992 0.59924033 1810 P16435;Q59ED7;A8K3B4;B2R6E5;Q63HL4;A0A8V8NE24;H0Y4R2;B4DJI8 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase yes no 0 0 1 1 0 1 33.834 33.834 3 1.1541E-05 7503 20230619_1880_Aki_TMTPro18x_K_F1 163.64 71.199 80475 56191 61066 77144 84050 86290 70252 75232 108780 48214 49984 38467 39881 35351 51138 60605 66399 37151 74197 51646 64070 76257 85195 86304 72782 76898 106110 50014 53539 39499 41630 37866 52688 59158 63180 35642 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41800000 22991 1810 21559 43232 34773 34773 1 9606 Homo sapiens 0.06722468314660546 RLETLLR Unmodified 899.55525 0.55525025 2340 B3KN59;B3KM36;O95816-2;O95816 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 1 3 0 1 42.37 42.436 3 0.025782 10665 20230619_1882_Aki_TMTPro18x_K_F3 73.26 9.7805 58091 52972 57217 53202 97156 107120 94153 76444 91407 32345 31782 29558 31051 25634 52586 20736 31979 26132 53747 48491 58797 54425 97642 103530 94891 79040 90730 35106 35436 30018 32740 26330 51776 21328 30756 24784 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30855000 22992 2340 21560 43233 34774 34774 1 9606 Homo sapiens 0.10145483888322815 RLETPEPGQQGLQAAAR Unmodified 1820.9493 0.94930842 1124 A0A0S2Z5C7;I3L419;A0A0S2Z5F0;I3L156;Q9BSJ6-2;Q9BSJ6 FAM64A Protein FAM64A yes no 0 0 1 6 0 1 39.429 39.517 3 7.0933E-31 9326 20230619_1886_Aki_TMTPro18x_K_F6 218.12 203.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22993 1124 21561 43234 34775 34775 1 9606 Homo sapiens 0.07167173672769422 RLETYYK Unmodified 971.50763 0.50763136 3375 Q6FGX9;Q53EY8;Q5T9B7;P00568 AK1 Adenylate kinase isoenzyme 1 yes no 0 0 1 1.5 0.5 1 1 40.547 40.583 3 0.020773 10055 20230619_1881_Aki_TMTPro18x_K_F2 80.165 44.285 321800 236570 252190 245070 384580 493110 415000 403580 626340 102800 99130 114550 113830 89689 194970 115840 137770 97726 296840 216790 264110 250110 390910 477490 422470 410240 603330 121490 127430 115150 119760 94708 193210 115250 132100 93160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 306650000 22994 3375 21562 43235;43236 34776 34776 1 9606 Homo sapiens 0.02073784897470432 RLEWEMMCR Unmodified 1309.573 0.57296728 2010 Q9Y3B9;A8K201 RRP15 RRP15-like protein yes no 0 0 1 8 0 1 47.856 47.914 3 0.04785 12624 20230619_1888_Aki_TMTPro18x_K_F8 41.347 26.928 43204 36367 41240 42177 38985 40662 41289 48491 45788 41185 38912 32742 39571 33833 38701 39134 34847 33025 39941 33342 42021 42121 40723 41424 41667 48778 46119 41753 40241 33688 40321 35143 39158 38906 33366 31439 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13062000 22995 2010 21563 43237 34777 34777 1 9606 Homo sapiens -0.06943628235012511 RLFEGNALLR Unmodified 1187.6775 0.67749065 299 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 RPS9 40S ribosomal protein S9 yes no 0 0 1 4.5 0.5 1 1 47.878 47.936 3 8.5071E-06 13014 20230619_1883_Aki_TMTPro18x_K_F4 157.38 112.61 631390 519780 547620 615240 607050 663370 649380 671070 701880 348130 324050 241670 344590 252880 484620 368270 362540 313300 583210 476680 564560 614180 627120 667320 653750 676390 695990 366490 351030 251290 357510 266820 482930 365520 347710 298340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1339900000 22996 299 21564 43238;43239 34778;34779 34778 2 9606 Homo sapiens 0.09115900899882945 RLFNVDR Unmodified 918.50355 0.50354903 1225 Q6IB71;A0A140VK43;P25788-2;P25788 PSMA3 Proteasome subunit alpha type;Proteasome subunit alpha type-3 yes no 0 0 1 3 0 1 38.344 38.397 3 0.006899 8930 20230619_1882_Aki_TMTPro18x_K_F3 103.75 62.627 74570 39079 48182 62312 66199 101880 63077 68441 425100 28859 19837 33163 35523 31121 39855 35599 38160 43320 68596 36035 51529 61448 68378 99112 74464 71148 395010 32434 40030 33397 36195 32415 40333 36146 36564 41045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21949000 22997 1225 21565 43240 34780 34780 1 9606 Homo sapiens 0.04103740194409511 RLGAGPQGAQEVR Unmodified 1337.7164 0.71639536 971 Q86VU2;A0PJF8;A0A0A6YYC0;B4DPV1;E9PJN1;O75676-2;O75676 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 yes no 0 0 1 8 0 1 31.719 31.724 3 0.0054002 6235 20230619_1888_Aki_TMTPro18x_K_F8 63.181 35.56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22998 971 21566 43241 34781 34781 1 9606 Homo sapiens 0.06104581463591785 RLGAPQQPGPGPPPSR Unmodified 1610.8641 0.86412223 1186 B3KY04;A0A140VJM4;Q96CX2 KCTD12 BTB/POZ domain-containing protein KCTD12 yes no 0 0 1 4 0.816 1 1 1 34.553 34.619 3 2.2744E-26 7438 20230619_1882_Aki_TMTPro18x_K_F3 239.51 204.74 76019 55384 64768 61921 89648 99951 98843 107500 118190 106110 131420 124050 115520 112310 122670 113400 127200 116770 70159 50789 67110 62539 91449 98347 99713 109160 119750 107870 133480 124760 118830 116220 124810 114180 121590 110910 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 250680000 22999 1186 21567 43242;43243;43244 34782;34783;34784 34782 3 9606 Homo sapiens 0.08312472997590703 RLGASLAFNNIYR Unmodified 1493.8103 0.81029574 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 8 0 1 50.147 50.224 3 0.0018776 13632 20230619_1888_Aki_TMTPro18x_K_F8 77.192 47.211 35112 34493 33405 31654 34667 44842 38923 38233 59349 26449 29854 27318 36852 25202 30858 31324 32182 28862 32494 31545 34095 32402 36118 44194 39601 39194 58017 27467 32299 27655 37076 26415 31556 31243 30755 27452 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24758000 23000 3758 21568 43245 34785 34785 1 9606 Homo sapiens 0.08314300565871235 RLGCGPEGER Unmodified 1129.5298 0.52984014 3184 Q2TSD3;L7RSM7;P17252;A0A169TED2;I3L148;P05771;P05771-2 PRKCA;PRKCB Protein kinase C;Protein kinase C alpha type;Protein kinase C beta type yes no 0 0 1 3 0.816 1 1 1 28.118 28.21 3 0.01934 4888 20230619_1883_Aki_TMTPro18x_K_F4 68.069 47.198 22680 18391 24711 18869 28206 27661 29496 29090 31125 28669 27568 26088 31572 25403 24331 34196 30896 25482 20986 16846 24949 19159 29018 27352 29715 29590 31482 28921 28613 26600 31750 26686 25284 33708 29461 24315 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37846000 23001 3184 21569 43246;43247;43248 34786;34787;34788 34787 3 9606 Homo sapiens -0.029743586964059432 RLGCGPEGERDVR Unmodified 1499.7263 0.72630812 3184 Q2TSD3;L7RSM7;P17252;A0A169TED2 PRKCA Protein kinase C;Protein kinase C alpha type yes no 0 0 2 3.5 0.5 1 1 28.362 28.454 4 5.7327E-06 5043 20230619_1883_Aki_TMTPro18x_K_F4 110.44 86.689 17473 16576 19988 10218 24705 18249 21687 24852 18858 20955 20768 16212 19509 15969 18071 25007 23618 15025 16192 15124 20096 11003 25117 18039 21972 24792 19468 21225 21135 16701 19885 16949 18743 24407 22485 14408 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18814000 23002 3184 21570 43249;43250 34789 34789 1 9606 Homo sapiens -0.0035659859333918575 RLGDHLAEK Unmodified 1037.5618 0.56179219 4097 Q69YN4-4;Q69YN4-2;Q69YN4-3;Q69YN4 KIAA1429 Protein virilizer homolog yes no 0 0 1 6.5 0.5 1 1 34.928 34.993 4 0.018336 7310 20230619_1887_Aki_TMTPro18x_K_F7 67.726 24.444 42330 22192 26800 35458 32588 41084 36885 37889 50859 51003 61261 67790 66562 56660 33584 77826 85639 75734 38935 20464 28663 34760 33614 41012 37369 39280 51427 51358 62580 67703 66255 59913 37843 77608 81367 71991 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34363000 23003 4097 21571 43251;43252 34790 34790 1 9606 Homo sapiens 0.0445137704903118 RLGDSSLSR Unmodified 989.52541 0.52540669 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 7 0.816 1 1 1 31.454 31.501 3 0.0010493 5891 20230619_1887_Aki_TMTPro18x_K_F7 99.283 57.174 209940 169160 180930 185120 255030 267150 255940 253350 377420 123690 134060 116300 128910 103920 201740 138630 167380 114300 193890 155040 187360 186790 259240 263630 261450 256230 367060 132260 148790 118210 135270 109440 201590 137610 160110 109020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 189480000 23004 3152 21572 43253;43254;43255 34791;34792 34791 2 9606 Homo sapiens 0.030225001523376704 RLGEWDLPEAVQR Unmodified 1567.8107 0.81068967 4455 Q9BW92;U3KQG0;Q9BW92-2;Q6ST48;Q9H045;A0A810V332 TARS2;DKFZp667F1511 Threonine--tRNA ligase, mitochondrial yes no 0 0 1 6 0 1 51.675 51.752 3 0.00012488 14676 20230619_1886_Aki_TMTPro18x_K_F6 85.976 67.144 112800 93667 100380 100750 100230 132750 133360 120630 166460 66418 70567 60107 70935 54837 82902 70053 74998 67460 104210 85822 103050 101630 105250 131480 133430 122640 163520 70049 76898 61232 72960 57576 83578 70051 71781 64129 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84866000 23005 4455 21573 43256 34793 34793 1 9606 Homo sapiens 0.0494967549507237 RLGGGLGGTR Unmodified 942.53591 0.5359118 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-4;B3KPV0 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 1 4.5 1.12 1 1 1 1 31.294 31.359 3 0.0016964 6265 20230619_1886_Aki_TMTPro18x_K_F6 75.229 26.946 266870 217040 246680 252500 299440 301610 302150 292910 342130 255790 283520 260910 271450 227040 273390 294850 315140 228990 246610 199020 253070 252800 306770 301170 305660 298850 343680 260810 293020 263720 277570 238800 280350 291510 300520 218510 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 511850000 23006 33 21574 43257;43258;43259;43260 34794;34795;34796;34797 34797 4 9606 Homo sapiens 0.062345275974166725 RLGGGPDDAK Unmodified 984.49886 0.49885759 1590 A0A7P0T8T9;A0A5K1VW74;Q9Y243;Q56A86;Q9Y243-2;A0A5F9ZGY0;A0A5F9ZHU3 AKT3 RAC-gamma serine/threonine-protein kinase yes no 0 0 1 4.5 0.5 1 1 33.882 33.951 3 0.055073 7144 20230619_1885_Aki_TMTPro18x_K_F5 46.985 17.899 60305 31610 76077 73627 127690 105430 84688 93803 88320 63187 106350 108700 76376 81896 90692 39626 110030 97631 55758 29321 76678 71239 127070 103930 88045 95790 90375 66905 106990 107300 79700 83104 92740 43930 105000 92161 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37740000 23007 1590 21575 43261;43262 34798 34798 1 9606 Homo sapiens 0.005988112609884411 RLGLAQK Unmodified 784.49192 0.49192172 3575 P41227-2;P41227;C9JN83;B7Z9N2;Q6P4J0;F8W808;B4DKJ7;A8MWP7;Q9BSU3;B4DFG1;C9JW55 NAA10;ARD1A;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 0 0 1 4 0 1 37.631 37.674 3 0.028366 8605 20230619_1883_Aki_TMTPro18x_K_F4 61.561 2.874 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23008 3575 21576 43263 34799 34799 1 9606 Homo sapiens 0.09105543171085628 RLGLPGDEVDNK Unmodified 1311.6783 0.67827852 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 4 0.816 1 1 1 44.568 44.633 3 0.00013663 11482 20230619_1885_Aki_TMTPro18x_K_F5 108.91 85.308 431220 297910 346590 423830 394860 444670 426750 469940 515920 549630 557310 619120 609320 479970 533870 652600 573730 553870 397700 273930 360330 417780 407590 448500 431300 480360 522470 553100 572500 620550 616370 508750 547060 647200 548420 527190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 956840000 23009 3758 21577 43264;43265;43266 34800 34800 1 9606 Homo sapiens 0.03490650758294578 RLGPGGLDPVEVYESLPEELQK Unmodified 2424.2537 0.25365509 437 A0A024R7B7;Q16543;Q6FG59;K7EQA9;A1L0W4;K7EIU0 CDC37;MBD5 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 0 1 6 0 1 62.66 62.712 4 3.5995E-09 19395 20230619_1886_Aki_TMTPro18x_K_F6 119.87 106.04 94410 82681 80251 93627 102580 118080 105830 108580 132890 71827 70687 79539 76518 66934 80429 92818 81681 93970 87228 75776 83130 93975 104990 117320 107290 110590 131200 74912 75793 80017 78149 70818 81861 92878 78225 89196 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143260000 23010 437 21578 43267 34801 34801 1 9606 Homo sapiens 0.09849840795959608 RLGQLAK Unmodified 784.49192 0.49192172 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q6JH03;Q6JH02 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 1 4.5 0.5 1 1 38.274 38.342 3 0.050131 8852 20230619_1885_Aki_TMTPro18x_K_F5 63.301 17.42 256100 178480 213360 220740 269560 295840 271670 271250 401600 137550 147490 121920 133020 97201 173650 155680 182710 110510 236260 163860 221190 220440 275940 292840 277540 275190 390740 146240 162530 123930 138210 104180 176230 153050 174230 105700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109430000 23011 1863 21579 43268;43269 34802 34802 1 9606 Homo sapiens 0.09105543171085628 RLGSLLPVLSPTSLPSPLPATLETPVPAFLK Unmodified 3210.8632 0.86317275 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 1 7 0 1 65.725 65.75 4 8.7282E-07 20403 20230619_1887_Aki_TMTPro18x_K_F7 94.155 86.622 7991.9 6150.3 5396.5 6497.5 6561.2 8535.6 9286.8 9919.2 10255 9954.3 10638 7630.6 11157 7438.2 10015 13173 10109 10549 7367.3 5635.9 5726.3 6563.6 6812.6 8505.7 9232.3 10030 10405 9986.2 10899 7867.7 11302 7990.5 10228 12987 9674.3 10045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 279810000 23012 2830 21580 43270 34803 34803 1 9606 Homo sapiens 0.34617568573776225 RLGSLVDEFK Unmodified 1162.6346 0.63462279 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 0 0 1 5.33 3.09 1 1 1 53.929 53.998 2;3 1.5647E-06 16033 20230619_1880_Aki_TMTPro18x_K_F1 148.91 79.717 1028300 745970 880110 946360 798560 963090 1103600 1044300 1007400 1112800 1067700 1087700 1318900 953680 1014500 1300900 1059400 977200 949060 684930 905790 939610 844610 974220 1092100 1063200 1034800 1119700 1103700 1101100 1322300 1006800 1041000 1282900 1012700 931880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5434400000 23013 150 21581 43271;43272;43273 34804;34805 34804 2 9606 Homo sapiens 0.05981086051792772 RLGTNQENQQPNQQPPGK Unmodified 2033.0039 0.0038631846 3349 O95235;O95235-2 KIF20A Kinesin-like protein KIF20A yes no 0 0 1 8 0 1 34.859 34.85 3 0.022124 7454 20230619_1888_Aki_TMTPro18x_K_F8 49.559 37.274 3200.3 1699.5 3332.8 3766.3 4211.3 5184.2 4573.6 2762.1 5517.3 5675.3 6748.5 4717.9 7722.3 4478.4 2978.3 4980.4 5052.1 3512 2953.8 1574.9 3391.9 3645.1 4319.3 5074.8 4614.8 3071.7 5616.7 5555.2 6886.4 4829 7609.9 4662.3 3236.7 4910 4803.1 3356.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9695100 23014 3349 21582 43274 34806 34806 1 9606 Homo sapiens 0.028681407535032122 RLGVLYWK Unmodified 1033.6073 0.60728582 4448 Q9BV57 ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase yes yes 0 0 1 7.5 0.5 1 1 53.352 53.423 3 0.011419 15119 20230619_1887_Aki_TMTPro18x_K_F7 75.738 53.607 122170 122440 114340 104490 122980 175260 132360 130330 228800 73952 79653 82039 84854 70939 79928 83073 87800 90526 113070 111910 116930 108030 127840 170790 135740 134700 221150 78386 88959 82600 86283 74198 81814 83697 83949 85893 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88115000 23015 4448 21583 43275;43276 34807 34807 1 9606 Homo sapiens 0.09182647302077385 RLGYIHR Unmodified 913.52462 0.52461883 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 0 1 6 0.816 1 1 1 29.404 29.475 3 0.0084032 5619 20230619_1886_Aki_TMTPro18x_K_F6 95.793 38.691 97639 86280 83109 73992 163620 265540 128180 130660 281960 29102 36773 42393 35255 70802 42445 23291 49057 40700 90218 78895 86912 78185 163690 250640 135740 139920 267930 36001 49198 43434 36791 69416 43285 25243 46816 38504 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 43349000 23016 3811 21584 43277;43278;43279 34808;34809 34809 2 9606 Homo sapiens 0.06439750293930047 RLGYISVVDTLK Unmodified 1362.7871 0.78710068 1573;3033 A0A5F9ZHM6;A0A5F9ZI15;A0A5F9ZHN0;A0A5F9ZH03;A0A5F9ZHE2;A0A5F9ZHR2;A0A5F9ZHL9;A0A5F9ZHJ4;A0A5F9ZI08;A0A5F9ZH39;A0A5F9ZI69;A0A5F9ZHJ6;A0A5F9ZHL3;A0A5F9ZGS5;A0A5F9ZHL5;A0A5F9ZH17;A0A5F9ZI18;A0A5F9ZI56;A0A5F9ZGY1;A0A5F9ZHG3;A0A5F9ZHQ5;A0A994J7V8;A0A5F9ZHC9;A0A5F9ZI81;A0A5F9ZH70;A0A5F9ZGZ1;A0A5F9ZHQ3;A0A5F9ZI36;A0A5F9ZHA1;A0A5F9ZH58;A0A5F9ZI73;A0A5F9ZHY6;A0A5F9ZGS7;A0A5F9ZH34;A0A5F9ZH10;A0A5F9ZH35;E9PCH6;A0A5F9ZI16;A0A5F9ZH99;A0A5F9ZH18;A0A5F9ZGX8;B7Z2H4;A0A5F9ZI53;A0A5F9ZH38;Q01484-5;Q01484-2;A0A5F9ZI45;A0A5F9ZI46;A0A5F9ZH30;B7Z636;A0A5F9ZGZ5;A0A5F9ZI65;A0A5F9ZHT8;A0A5F9ZGY3;A0A5F9ZH19;A0A5F9ZHN5;A0A5F9ZI40;A0A5F9ZHT4;I6L894;A0A5F9ZHD2;A0A5F9ZI41;A0A5F9ZHF7;A0A5F9ZHE4;E9PHW9;A0A5F9ZGY4;Q01484;A0A5F9ZHS1;D6RHE1;A0A5F9ZGX3;H0Y933;A0A5F9ZI30;A0A5F9ZHR8;A0A0U1RQN6;A0A669KB19;B7Z651;Q59G01;H0Y9E9;Q12955-7;Q12955-5;Q12955-4;Q12955 ANK2;ANK3 Ankyrin-2;Ankyrin-3 no no 0 0 1 4 0 1 56.018 56.026 3 0.057384 16662 20230619_1883_Aki_TMTPro18x_K_F4 45.115 4.7638 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23017 1573;3033 21585 43280 34810 34810 1 9606 Homo sapiens 0.12021861728544536 RLHGLDEEAEQK Unmodified 1423.7056 0.7055559 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57;A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 yes no 0 0 1 3 0 1 36.429 36.484 3 4.4773E-10 8163 20230619_1882_Aki_TMTPro18x_K_F3 186.51 153.1 203690 107130 175140 195420 196690 210410 199940 197660 243570 270810 277760 265490 293520 242910 200720 288660 274790 256140 187710 98968 180720 190130 202770 211230 202790 204760 247200 269600 283830 269020 294640 253720 210310 287290 262070 243690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 164450000 23018 471 21586 43281 34811;34812 34812 2 9606 Homo sapiens 0.01065134298664816 RLIAEAK Unmodified 799.49159 0.49158736 674 B4DNL1;Q9BV37;Q53FW9;A0A024RBH5;Q13610;Q86X79;Q05BL3;Q6PKI5;Q6PIN4;Q13610-2 PWP1 Periodic tryptophan protein 1 homolog yes no 0 0 1 1 0 1 38.261 38.261 3 0.0053423 9296 20230619_1880_Aki_TMTPro18x_K_F1 110.12 16.92 196930 144610 170250 175900 231180 215220 210940 211450 295130 173100 189990 163900 206270 158100 164710 200820 237800 155560 181780 132720 176070 175620 234660 214660 216340 215210 291350 176990 200350 166830 208050 165550 172420 198500 226250 148530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110130000 23019 674 21587 43282 34813 34813 1 9606 Homo sapiens 0.08382123451224288 RLIDLHSPSEIVK Unmodified 1505.8566 0.85657723 3681 P60866;P60866-2;A0A7P0S5H5;G3XAN0 RPS20 40S ribosomal protein S20 yes no 0 0 1 3.33 3.3 2 1 59.518 59.537 4 7.0434E-11 13474 20230619_1880_Aki_TMTPro18x_K_F1 180.28 78.22 628830 449690 483130 610820 469290 601870 509560 621440 738290 728220 663240 723620 796350 688350 455410 943200 866450 832330 579890 413220 503480 603280 491150 609420 518800 636100 736560 730170 689670 733820 792920 724490 494460 936000 824800 791850 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 9470200000 23020 3681 21588 43283;43284;43285 34814;34815;34816 34814 3 9606 Homo sapiens 0.12388320677291631 RLIPDGCGVK Unmodified 1113.5965 0.59646314 3513 X1WI28;X5D2T3;P27635;F8W7C6;X5D7P1 RPL10 60S ribosomal protein L10 yes no 0 0 1 1.5 0.5 1 1 42.868 42.908 3 0.00010861 11157 20230619_1881_Aki_TMTPro18x_K_F2 131.12 100.91 2532900 1834000 2500700 2375700 2565800 2713000 2728800 2782100 2935200 2416000 1239900 1057300 2527700 1509000 1364700 2772000 2678100 2408800 2340200 1684300 2543000 2359800 2663300 2719300 2747900 2826300 2913800 2421200 1406300 1153000 2481900 1612600 1488200 2739900 2547800 2292700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2844000000 23021 3513 21589 43286;43287 34817 34817 1 9606 Homo sapiens 0.044208768654925734 RLIPNATGTGTFSPGASPGSEAR Unmodified 2243.1295 0.12945763 3950 Q16512;Q16512-2;K7EN76;Q16512-3 PKN1 Serine/threonine-protein kinase N1 yes no 0 0 1 3 0 1 45.579 45.655 3 7.0787E-08 12134 20230619_1882_Aki_TMTPro18x_K_F3 101.21 91.148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23022 3950 21590 43288 34818 34818 1 9606 Homo sapiens 0.05761807819135356 RLIQQDR Unmodified 927.52501 0.52501276 1798 Q86XL4;A0A8Q3WKY0;A0A8Q3SIB7;A0A8Q3SII9;Q6F5E8-2;Q6F5E8 RLTPR Leucine-rich repeat-containing protein 16C yes no 0 0 1 8 0 1 29.099 29.119 3 0.0022539 5330 20230619_1888_Aki_TMTPro18x_K_F8 121.85 44.532 52402 40196 59718 51301 36711 40929 41130 44581 57132 49563 62665 65186 56589 47282 63329 48925 81693 60418 48492 36901 59642 50791 40087 42265 41779 45449 57464 50298 63795 64833 58284 49458 65199 49834 77839 57341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19864000 23023 1798 21591 43289 34819 34819 1 9606 Homo sapiens 0.05835125223131854 RLITGASDSELR Unmodified 1316.7048 0.70482762 4064 Q5TDG3;Q9UNX4 WDR3 WD repeat-containing protein 3 yes no 0 0 1 6 0 1 39.077 39.16 3 0.0012892 9199 20230619_1886_Aki_TMTPro18x_K_F6 86.803 51.262 41642 22662 28530 35399 32273 38927 37625 37317 47059 46795 48943 53993 56362 50519 33241 73286 67844 66534 38325 20886 30176 34723 33445 39033 37910 38491 47491 47013 50450 54405 56249 53402 36340 72771 64569 63270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63395000 23024 4064 21592 43290 34820 34820 1 9606 Homo sapiens 0.059143396495983325 RLITGLGVGR Unmodified 1040.6455 0.64546224 4412 Q9BQG0;Q9BQG0-2;B4DZZ1;B4DWP5 MYBBP1A Myb-binding protein 1A yes no 0 0 1 8 0 1 43.168 43.178 3 0.064285 10792 20230619_1888_Aki_TMTPro18x_K_F8 45.126 26.859 47620 36155 37474 49089 40891 41757 44658 50024 66052 42448 51262 51107 50985 44714 43127 66429 64996 53970 43936 33214 39028 48402 42344 42970 45465 50337 65394 43607 53261 51341 51718 47446 45326 65637 61900 51433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51183000 23025 4412 21593 43291 34821 34821 1 9606 Homo sapiens 0.12676533216767893 RLIVDVIR Unmodified 982.62875 0.62874955 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;B4DNP4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 1 5 0.816 1 1 1 46.79 46.849 3 0.0035025 12412 20230619_1885_Aki_TMTPro18x_K_F5 98.033 46.179 101630 88077 89215 94404 95222 99664 97840 103620 111850 107210 110200 105370 115670 102980 113520 127140 119550 109630 93911 80685 91769 94938 98505 100520 98965 105660 113100 108110 113370 107040 117820 107530 115880 126370 114260 104350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 221740000 23026 707 21594 43292;43293;43294 34822;34823;34824 34823 3 9606 Homo sapiens 0.13674032330789032 RLLDQIVEK Unmodified 1112.6554 0.65535823 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 0 1 4.5 3.5 1 1 51.679 51.718 3 0.00015244 15075 20230619_1880_Aki_TMTPro18x_K_F1 134.84 59.924 1833100 1497900 1525600 1656200 1797100 2048800 1849200 1690000 2091400 1923800 1874900 1784800 2075700 1706800 1808000 2361600 2113900 1955800 1692700 1372800 1580300 1664900 1848100 2034100 1868400 1757800 2108600 1928500 1941900 1817000 2099400 1797600 1863100 2338300 2018500 1862500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5207000000 23027 2644;4322 21595 43295;43296 34825;34826;34827 34825 3 9606 Homo sapiens 0.10353676431441272 RLLEGDGGPNTGGMGAYCPAPQVSNDLLLK Oxidation (M) 3115.5067 0.50666844 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2;F8WD69 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 1 1 8 0 1 58.281 58.328 4 9.1063E-15 17148 20230619_1888_Aki_TMTPro18x_K_F8 133.75 120.43 33516 25275 31180 33511 32386 33395 34781 33596 32852 37244 38933 32343 37188 34651 36183 42039 37721 38928 30958 23214 31897 33162 33584 33787 34882 34410 33840 37290 39545 33172 37979 36046 36930 41938 36084 37003 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 514070000 23028 3488 21596 43297 34828 34828 2148 1 9606 Homo sapiens 0.03353537401699214 RLLELFPVNR Unmodified 1255.7401 0.74009091 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;B5MCE7;Q75MG1;E9PFD4 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 1 6 0.816 1 1 1 55.947 56.012 3 1.9169E-07 16415 20230619_1886_Aki_TMTPro18x_K_F6 185.77 142.14 203790 155180 152700 177040 147840 203950 178860 208290 246480 188140 173690 155220 189750 155190 137890 221590 192800 178830 187960 142310 159490 177380 155360 204190 180640 211820 244220 190330 182130 159270 190740 163600 144620 218960 183840 170360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 415990000 23029 607 21597 43298;43299;43300 34829 34829 1 9606 Homo sapiens 0.12245046968087081 RLLELGPKPEVAQQTR Unmodified 1834.0425 0.042480522 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 2 3 0 1 45.663 45.739 3 0.0327 12174 20230619_1882_Aki_TMTPro18x_K_F3 54.103 42.663 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23030 3647 21598 43301 34830 34830 1 9606 Homo sapiens 0.1588209812596233 RLLIDGDGAGDDRR Unmodified 1527.7754 0.7753668 222 Q6I9Y2;A0A024R332;H7C5E3 THOC7;NIF3L1BP1 THO complex subunit 7 homolog yes no 0 0 2 3 0 1 36.365 36.42 4 1.8432E-06 8139 20230619_1882_Aki_TMTPro18x_K_F3 124.25 105.79 37860 24411 39969 39530 40232 38543 42850 49420 50806 44653 51821 53393 55693 41563 48153 53868 70054 54088 34977 22489 40420 38666 41794 39291 43326 49590 51328 45634 53295 53423 56345 43934 50328 53931 66705 51429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33580000 23031 222 21599 43302 34831 34831 1 9606 Homo sapiens 0.03259012967259878 RLLKEEDMTK Oxidation (M) 1277.6649 0.66493664 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 1 2 7 0 1 38.247 38.311 4 0.045871 8597 20230619_1887_Aki_TMTPro18x_K_F7 51.727 29.253 52887 51141 57869 59854 79896 65582 67935 68521 54005 63105 85386 45686 43306 26581 77116 24422 31464 18947 48996 46870 58685 59825 80683 66020 68801 69637 57043 63475 84073 46596 46983 27989 75011 24457 30459 18100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46920000 23032 543 21600 43303 34832 34832 322 1 9606 Homo sapiens 0.03721076654642275 RLLSDSLPPSTGTFQEAQSR Unmodified 2189.1077 0.10765955 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 1 1 0 1 49.298 49.298 3 3.9358E-11 14093 20230619_1880_Aki_TMTPro18x_K_F1 124.77 104.12 6305.1 4463.9 8684 5610.1 9113.8 8942.1 6516.2 6658.6 9234.4 10038 9842.7 10528 9232.2 8278.1 8684.4 9938.8 9293.9 11713 5843.5 4098.7 8607.7 5619.7 9353.4 8740.8 6812.2 7046.3 9287.2 9979.6 10046 10582 9418.5 8702.3 8882.2 10056 8903.2 11098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31396000 23033 1292 21601 43304 34833 34833 1 9606 Homo sapiens 0.06067003070484134 RLLSWSDNWR Unmodified 1331.6735 0.67346791 4267 V9HWF3;Q8TCD5;A0A384NYP3;J3KSX6;J3KSY6 HEL74;NT5C 5'(3')-deoxyribonucleotidase, cytosolic type yes no 0 0 1 5 0 1 52.543 52.616 3 0.037859 14893 20230619_1885_Aki_TMTPro18x_K_F5 52.391 33.434 35729 29373 35879 30636 29486 34349 40518 37460 45369 37117 39474 39791 42705 35503 36037 43289 44476 45212 33040 26907 36314 30920 31442 34531 40360 38049 45678 37625 40918 40141 43171 37183 37267 43462 42478 42919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49534000 23034 4267 21602 43305 34834 34834 1 9606 Homo sapiens 0.020898114061765227 RLMAEDEEGYRK Oxidation (M) 1511.7038 0.70384134 1348;1872 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A994J4Z2;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8YDA1;Q59FZ6;A0A2R8YGP5;A5D6X0;A0A994J4Z7;P51531-2;P51531;B4DK35;A0A994J501;A0A0U1RQZ9;F6VDE0;A0A994HRU5 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 1 2 3.5 0.5 1 1 34.746 34.802 4 0.022913 7435 20230619_1883_Aki_TMTPro18x_K_F4 61.11 47.147 36378 27571 35925 38343 40367 45008 41230 37940 43704 46364 51312 49152 51621 44664 44128 52331 53574 46582 33619 25335 36614 37908 41602 44836 41601 39484 44701 46495 52281 49633 52327 46610 45568 52126 51120 44330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90982000 23035 1348;1872 21603 43306;43307 34835 34835 851 1 9606 Homo sapiens -0.031542427816248164 RLMTEILGR Unmodified 1087.6172 0.61719858 416 B2R6U8;A0A024R6W2;O43809;H3BND3;H3BV41 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 1 4.5 0.5 1 1 49.339 49.396 3 0.00089461 13707 20230619_1883_Aki_TMTPro18x_K_F4 103.7 67.366 145660 89895 101850 129200 92824 122930 112560 128710 193670 158480 157690 215820 184710 184360 118450 279090 265400 291040 134150 82714 107150 127110 98110 124830 114860 131890 191190 160400 164930 215450 184920 196060 130630 279050 252690 276210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220810000 23036 416 21604 43308;43309 34836;34837 34836 2 9606 Homo sapiens 0.07689467245154447 RLNDFASTVR Unmodified 1177.6204 0.62036971 3068 H3BNX8;P20674;H3BRM5;H3BV69 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes no 0 0 1 2.5 0.5 1 1 40.315 40.38 3 5.2192E-07 9965 20230619_1881_Aki_TMTPro18x_K_F2 154.66 120.78 680980 515390 684770 732960 732460 919980 890100 851320 1064800 622760 691540 653690 666970 597500 811110 646740 617500 668800 629420 473730 696600 724520 762280 913870 893220 868390 1058300 643510 726160 660690 688490 620690 810690 650980 593040 634800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 995600000 23037 3068 21605 43310;43311 34838;34839 34838 2 9606 Homo sapiens 0.03866433623534249 RLNDVVK Unmodified 842.4974 0.49740102 252 Q4G0F5;A0A024R3L9 VPS26B Vacuolar protein sorting-associated protein 26B yes no 0 0 1 8 0 1 38.392 38.377 3 0.054263 8828 20230619_1888_Aki_TMTPro18x_K_F8 61.679 4.5757 126070 92900 122030 121660 169190 164470 167310 165260 189460 67830 81304 64916 63918 52143 126150 58167 90238 55897 116470 85321 125000 121070 171790 163090 169370 166130 187030 73883 87777 65732 68757 54537 124810 58458 86448 53242 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26232000 23038 252 21606 43312 34840 34840 1 9606 Homo sapiens 0.06985221962906962 RLNHYVLYK Unmodified 1204.6717 0.671677 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 1 6 0 1 40.921 41.015 4 0.0027105 9948 20230619_1886_Aki_TMTPro18x_K_F6 90.657 43.396 114170 97069 99445 100170 119250 164340 129310 123460 179670 26978 24707 12184 11998 12558 48035 20948 25005 13978 105480 88899 102600 101770 122950 160280 131180 126350 173480 32326 32066 13185 14445 13379 46787 20613 24071 13391 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56028000 23039 2361 21607 43313 34841 34841 1 9606 Homo sapiens 0.07752802388222335 RLNLATECLPLDK Unmodified 1541.8236 0.82356254 4150 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 0 0 1 1 0 1 52.762 52.762 3 0.001599 15485 20230619_1880_Aki_TMTPro18x_K_F1 80.371 58.173 56161 44607 57172 57565 54020 66498 61899 67887 70278 64265 64236 65134 69344 59926 71667 69928 62033 74074 51929 40949 57958 57194 56628 66569 62240 69134 70877 65173 66441 65918 70716 62522 72299 70352 59529 70268 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 965210000 23040 4150 21608 43314 34842 34842 1 9606 Homo sapiens 0.07432370562946744 RLNMATLR Unmodified 973.54912 0.54911902 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 0 1 6 0 1 37.896 37.971 3 0.00033099 8716 20230619_1886_Aki_TMTPro18x_K_F6 138.4 91.314 24638 21921 16346 18441 60241 237200 33778 32873 302980 13219 8226.1 16768 16334 12604 16195 13492 19892 16344 22731 20042 18186 21535 60410 218050 43504 47015 280660 15465 22583 16701 16567 13194 16655 13714 18973 15507 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33705000 23041 3811 21609 43315 34843 34843 1 9606 Homo sapiens 0.06128642385147032 RLNQQPSQGLGPR Unmodified 1449.7801 0.78005825 729 Q0EFC6;B4DYK6;A0A1U9X7R2;A0A024RCR2;P36915;A2AB27 HSR1;GNL1 Guanine nucleotide-binding protein-like 1 yes no 0 0 1 3.5 0.5 1 1 32.972 33.036 3 1.1434E-15 6740 20230619_1883_Aki_TMTPro18x_K_F4 205.86 179.74 46266 32437 47583 52241 53975 58531 55443 63678 72031 44146 50248 42783 41866 38749 50425 42581 58472 37165 42753 29870 48352 51191 55610 58792 56333 64147 71470 45662 52176 43401 43446 40284 51516 42462 55721 35435 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41101000 23042 729 21610 43316;43317 34844 34844 1 9606 Homo sapiens 0.07315941900674261 RLNQVIFPVSYNDK Unmodified 1691.8995 0.89950468 2895 E7EQ69;Q9GZZ1;C9J5D1;Q9GZZ1-2;C9JZU6;C9J5J3;A0A0D9SF32;F8WCK0 NAA50 N-alpha-acetyltransferase 50 yes no 0 0 1 4 0 1 53.837 53.853 3 5.6995E-09 15731 20230619_1883_Aki_TMTPro18x_K_F4 162.37 138.77 222600 188660 187210 198440 171420 204720 212760 204720 213570 297150 259400 241490 300320 248080 227430 349110 282970 271760 205610 172810 192970 199790 180580 206610 212210 211590 219800 293540 265600 248050 301720 261000 236290 344510 270130 258980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 775820000 23043 2895 21611 43318 34845 34845 1 9606 Homo sapiens 0.08123090734761718 RLNSTQGEIR Unmodified 1172.6262 0.62618337 1564 A0A994J792;A0A590UK57;H7BYW9;A0A590UJ84;B1AKN3;Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein yes no 0 0 1 7 0 1 29.26 29.367 3 0.0027053 5158 20230619_1887_Aki_TMTPro18x_K_F7 90.05 53.526 13717 11285 13265 12081 14341 15628 14368 15764 16248 8797.4 10783 9628.4 9561.9 9797.7 11007 9835.1 11057 7646.2 12681 10340 13521 12192 14812 15539 14546 15902 16201 9302.3 11264 9755.6 9880.7 10090 11162 9767.9 10555 7298.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6288900 23044 1564 21612 43319 34846 34846 1 9606 Homo sapiens 0.04677532135178808 RLNVCVSK Unmodified 974.53313 0.5331346 1144 C9IYN3;A8K894;V9GYK2;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9-4;Q8WVV9;B7WPG3;Q8WVV9-5;H7C464 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 0 0 1 5 0 1 40.03 40.119 3 0.065963 9576 20230619_1885_Aki_TMTPro18x_K_F5 49.85 21.682 142310 97621 108750 126900 149450 154370 142670 150400 219050 155640 175320 167630 168790 165570 141290 185590 217650 175180 131200 89678 113970 126080 151990 153930 146540 154010 216870 157550 181530 169650 171430 171790 148600 185490 207210 166650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112710000 23045 1144 21613 43320 34847 34847 1 9606 Homo sapiens 0.04484936148253382 RLNVTPLAR Unmodified 1038.6298 0.62981218 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHJ0;A0A5F9ZHD4;A0A5F9ZI66 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 1 6.5 0.5 1 1 38.567 38.64 3 0.00023101 8940 20230619_1886_Aki_TMTPro18x_K_F6 126.31 88.227 214950 186940 200930 216410 246670 284170 281890 264020 310700 100860 109770 80614 84520 75338 161030 129440 133130 69593 198730 171360 206130 217040 253650 281690 282810 266770 306140 110460 120960 82937 90832 80647 160660 125980 127210 66967 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 567100000 23046 1208 21614 43321;43322 34848;34849 34848 2 9606 Homo sapiens 0.11204246699708165 RLNVWDLSK Unmodified 1129.6244 0.62439245 2910;3814 E9PC52;Q6FHQ0;Q16576;Q16576-2;A8K6A2;Q5JP02;Q09028-3;Q09028-2;Q09028;Q09028-4;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 no no 0 0 1 3.5 0.5 1 1 52.185 52.229 3 0.0019396 15152 20230619_1882_Aki_TMTPro18x_K_F3 92.538 44.115 636140 565070 570210 516400 600730 887190 664780 622810 919950 308260 300930 354960 356080 293600 348230 339270 403310 384760 588030 516940 585170 530710 625700 862570 673850 646070 896080 331300 340720 356260 361640 307380 357200 342780 385230 365030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 978350000 23047 2910;3814 21615 43323;43324 34850;34851 34850 2 9606 Homo sapiens 0.06476523117203214 RLPDAHSDYAR Unmodified 1299.632 0.63199703 1111 A0A0S2Z4Z0;Q96PK6;B4DNG4 RBM14 RNA-binding protein 14 yes no 0 0 1 5.5 1.12 1 1 1 1 31.454 31.522 4 1.111E-06 6176 20230619_1885_Aki_TMTPro18x_K_F5 163.59 140.21 96056 72049 90844 96810 117900 114200 113590 108540 128410 114410 129970 128100 125950 104560 112510 130350 130700 124240 88734 66185 93145 95943 120100 114060 115220 111440 130000 115750 133080 128660 128020 109990 115750 130190 124830 118090 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 412670000 23048 1111 21616 43325;43326;43327;43328 34852;34853;34854;34855 34852 4 9606 Homo sapiens -0.005833693531485551 RLPDGLTR Unmodified 926.52976 0.52976379 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 1 3.67 3.09 1 1 1 37.141 37.156 3 0.0021294 8809 20230619_1880_Aki_TMTPro18x_K_F1 107.9 27.737 474070 329880 373650 433600 408480 497760 452480 450840 536940 556950 592190 592740 660370 551820 455650 652390 679650 621320 437180 303050 388870 430060 423460 497230 456310 466660 544600 558340 607690 598840 662200 575860 480350 651690 647710 590670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 539970000 23049 2188 21617 43329;43330;43331 34856;34857;34858 34856 3 9606 Homo sapiens 0.06356009365890714 RLPEAIEEVK Unmodified 1182.6608 0.66083754 1451 A0A384N605;U3KQ56;Q9UBQ7;Q5M7Z5 GRHPR Glyoxylate reductase/hydroxypyruvate reductase yes no 0 0 1 5.5 0.5 1 1 47.814 47.893 3 0.00030855 12828 20230619_1885_Aki_TMTPro18x_K_F5 114.86 63.953 214700 174860 211430 200960 225850 277530 239390 235440 322510 181320 208020 214270 212690 174040 203820 202000 224460 221030 198490 160320 215240 201860 234190 273790 243070 241980 318790 187470 219060 214720 216530 182370 208540 203630 214540 209740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186880000 23050 1451 21618 43332;43333 34859 34859 1 9606 Homo sapiens 0.07681355223235187 RLPENLYDDR Unmodified 1289.6364 0.6364137 2203 B2R4A2 Cytochrome b-c1 complex subunit 7 yes yes 0 0 1 4 0 1 41.675 41.718 3 0.00028817 10304 20230619_1883_Aki_TMTPro18x_K_F4 112.7 78.817 71173 54753 72177 80502 86255 96041 94548 86288 116990 78107 78301 87754 87728 78191 75593 86000 91065 87204 65794 50343 73514 79342 88730 95677 95475 88636 116260 79764 82630 88304 88720 81363 77989 86345 86954 82828 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62529000 23051 2203 21619 43334 34860 34860 1 9606 Homo sapiens 0.003180950697469598 RLPENLYNDR Unmodified 1288.6524 0.65239812 3454 P14927;B7Z2R2;P14927-2;E5RHG9 UQCRB Cytochrome b-c1 complex subunit 7 yes no 0 0 1 6.5 0.5 1 1 40.239 40.318 3 7.6153E-06 9637 20230619_1886_Aki_TMTPro18x_K_F6 153.95 96.598 344190 309520 338520 390360 434230 489280 459600 451500 547160 352910 382200 388420 415720 339800 408550 382620 379750 401770 318410 283940 346190 388770 444310 486290 464380 461220 545300 363420 401490 391160 422810 354460 413830 385010 363770 381320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1026499999.9999999 23052 3454 21620 43335;43336 34861;34862 34861 2 9606 Homo sapiens 0.019618013066292406 RLPEYPQVDDLLLR Unmodified 1725.9414 0.94136949 2898;4664 E7ERK9;Q9UI10;Q9Y3W7;Q9HBP7;F8W8L6;Q9UI10-3;Q9UI10-2;Q71US4;B4DUP5;Q59FC8 EIF2B4;DKFZp586J0119 Translation initiation factor eIF-2B subunit delta no no 0 0 1 8 0 1 58.73 58.772 3 2.5944E-07 17291 20230619_1888_Aki_TMTPro18x_K_F8 141.34 117.27 75837 59533 67242 74909 76015 83046 79993 75785 89468 69717 70341 68424 72274 56780 84582 75289 71909 74933 70041 54640 69200 74482 78390 83192 80697 77782 89801 70783 73183 69154 74250 59959 85042 75371 68946 71165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 281430000 23053 2898;4664 21621 43337 34863 34863 1 9606 Homo sapiens 0.10743646423270548 RLPGAIDVIGQTITISR Unmodified 1809.0472 0.047231549 1861 Q6UN15;A0A994J3L0;A0A994J3K5;A0A994J3M0;A0A994J3Q0;A0A994J442;A0A994J3S6;A0A994J6N5;A0A994J3S0;A0A994J453;A0A994J474;A0A994J464;A0A994J6R0;A0A994J458;A0A994J3I9;A0A994J469;A0A994J6C6;A0A994J6D6;A0A994J3L5;A0A994J6B4;A0A994J6P0;A0A994J6Q2;A0A994J3R0;A0A994J3J1;A0A994J6Q5;A0A994J6B8;A0A994J3K1;A0A994J3R5;Q6UN15-4;H0Y8P7;A0A994J6P3;A0A994J6E0;A0A994J6D3;A0A994J3P6;A0A994J3Q5;A0A994J438;A0A994J6E2;Q6UN15-3;Q6UN15-5;A0A994J6P8;A0A994J6C2;B4DTW7;A0A994J3T5;A0A0B4J203 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes no 0 0 1 5 0 1 59.204 59.258 3 2.3349E-23 17572 20230619_1885_Aki_TMTPro18x_K_F5 195.77 164.9 41347 34124 42634 38053 38416 44764 45425 43569 50945 44564 41890 43357 47470 40824 46579 48764 45553 54662 38244 31277 43116 38221 40442 44732 45568 44618 51223 44964 43671 43987 48234 42628 47339 49198 43658 51822 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141260000 23054 1861 21622 43338 34864 34864 1 9606 Homo sapiens 0.17506982268719185 RLPLNFLSGEK Unmodified 1272.719 0.71902112 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;Q9BXJ9-4;A0A8V8TQT7 NAA15;NARG1 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 1 4.5 0.5 1 1 55.254 55.292 3 0.0081027 16013 20230619_1885_Aki_TMTPro18x_K_F5 69.846 38.474 121250 97347 109200 112690 108830 127210 122420 126060 153260 129210 104460 106100 130960 108270 104030 150730 136000 126570 112010 89264 111950 112770 113570 127510 123590 128910 152460 129780 110620 108890 131580 113860 108280 149290 129750 120510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109910000 23055 2297 21623 43339;43340 34865 34865 1 9606 Homo sapiens 0.09357036868550495 RLPPEQESLSR Unmodified 1310.6943 0.69426293 4276 Q8WUA4;Q53QN0;Q8WUA4-2;C9JNH7 GTF3C2 General transcription factor 3C polypeptide 2 yes no 0 0 1 5.5 0.5 1 1 34.777 34.845 3 0.00028881 7492 20230619_1885_Aki_TMTPro18x_K_F5 107.03 76.634 19452 13852 20563 18038 23970 39319 22986 19993 36572 21018 27986 26727 29199 22005 23308 24623 28653 27522 17981 12723 20849 18134 24729 37660 23637 21785 36085 21417 29149 26724 29470 23006 24106 24862 27356 26114 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32269000 23056 4276 21624 43341;43342 34866 34866 1 9606 Homo sapiens 0.051343569951768586 RLPPQQIEK Unmodified 1107.64 0.64004252 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;B1AK85;A0A6I8PIN8 CAPZB F-actin-capping protein subunit beta yes no 0 0 1 4 3.29 2 1 2 38.886 38.896 3 2.1037E-05 8876 20230619_1888_Aki_TMTPro18x_K_F8 161.44 119.25 310490 219110 306120 328060 370190 365690 345230 365120 407950 373990 432380 429880 382400 345740 401780 397990 468780 405120 286820 201580 312360 322730 378520 366910 351580 373230 412890 379190 440320 431040 392990 362040 411860 399570 447440 384940 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 374890000 23057 1434 21625 43343;43344;43345;43346;43347 34867;34868;34869;34870;34871 34870 5 9606 Homo sapiens 0.09052809634272307 RLPTVLLK Unmodified 938.62769 0.62768692 4601 Q9NV31 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 yes yes 0 0 1 6 0 1 50.043 50.12 3 0.049399 13946 20230619_1886_Aki_TMTPro18x_K_F6 51.346 17.093 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23058 4601 21626 43348 34872 34872 1 9606 Homo sapiens 0.15591817961887955 RLPVPESITGFAR Unmodified 1441.8041 0.80414773 4235 Q8N5K1;A0A2R8Y540;I3L1N9 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes no 0 0 1 4 0 1 51.787 51.814 3 1.7744E-15 14835 20230619_1883_Aki_TMTPro18x_K_F4 178.84 158.41 151850 137710 139250 177060 138940 176520 174730 155560 211920 176890 172110 165290 180580 164070 180400 207490 194840 203590 140410 126360 142780 175490 145560 177990 175160 161040 212100 177410 178820 168370 184140 171550 184390 207510 186340 193380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 337910000 23059 4235 21627 43349 34873 34873 1 9606 Homo sapiens 0.10091782334325217 RLPYVPEPYYPESGWDR Unmodified 2123.0112 0.011239973 4566 Q9NPL8;C9JU35;C9JR82;G3XA94;H7C5U1;F8WAU6;F8WB00;F8WC42 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes no 0 0 1 8 0 1 56.876 56.933 3 9.4083E-14 16533 20230619_1888_Aki_TMTPro18x_K_F8 162.53 143.14 36022 35484 33751 39623 42632 42897 41430 39679 50011 48336 44678 58191 57305 48268 54834 60089 55556 65666 33334 32504 34640 39720 43530 43081 42097 41003 50285 48691 46747 58252 57969 50746 55874 60489 53219 62274 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59625000 23060 4566 21628 43350 34874 34874 1 9606 Homo sapiens -0.00534519698794611 RLQAAGNAVK Unmodified 1026.5934 0.59342667 1292;4740 A0A1S5UZ07;Q9Y490;Q9Y4G6;A0A1B0GVU7;G1UI21 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 1 3.5 0.5 1 1 35.226 35.278 3 5.0802E-06 7692 20230619_1882_Aki_TMTPro18x_K_F3 162.8 121.77 154750 98761 146960 142140 280670 369640 222090 218020 371670 39555 42248 46677 47491 38175 68106 39510 48362 45973 142840 90858 152030 142760 280180 352700 231530 228270 356000 50592 59123 46914 49428 39746 67640 40140 46447 43605 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150540000 23061 1292;4740 21629 43351;43352 34875;34876 34875 2 9606 Homo sapiens 0.0811936980298924 RLQAIIK Unmodified 840.55452 0.55452197 3884 Q14257;Q14257-2;H0YL43 RCN2 Reticulocalbin-2 yes no 0 0 1 5 0 1 42.927 43.009 3 0.0032788 10775 20230619_1885_Aki_TMTPro18x_K_F5 102.77 47.332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23062 3884 21630 43353 34877 34877 1 9606 Homo sapiens 0.1278668923927171 RLQAVQAR Unmodified 940.55665 0.55664724 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H962;A0A994J6V7 HUWE1 E3 ubiquitin-protein ligase HUWE1 no no 0 0 1 4.5 0.5 1 1 28.748 28.822 3 0.0017237 5140 20230619_1883_Aki_TMTPro18x_K_F4 101.64 63.405 30418 22772 27874 31177 41893 49673 32997 32838 62514 15678 17402 19176 17946 18466 21116 13965 21947 15837 28092 20923 28760 31008 42265 48415 34650 34251 60068 16993 20012 19285 18497 18818 21418 14240 20948 15045 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5885700 23063 594 21631 43354;43355 34878 34878 1 9606 Homo sapiens 0.0839911797708055 RLQDEDASSTQQR Unmodified 1532.7179 0.7179115 1726 H7C1X4;Q53SQ1;B4DLH6;A0A804HIA8;Q15032-2;Q15032-4;Q15032;Q15032-3 R3HDM1;R3HDM R3H domain-containing protein 1 yes no 0 0 1 2 0 1 27.738 27.815 3 3.8574E-06 4935 20230619_1881_Aki_TMTPro18x_K_F2 127.76 106.46 11089 4522.9 15643 13913 18334 19119 17234 17205 18607 11650 17781 19827 17094 15772 14672 7821.7 19948 15953 10257 4227.6 15542 13331 18779 18875 17486 17562 18815 12331 18264 19600 17364 15983 15212 8470.7 19007 15080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9892100 23064 1726 21632 43356 34879;34880 34880 2 9606 Homo sapiens -0.027138740289728958 RLQDEER Unmodified 944.46756 0.46755746 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;H7C5N8 PRRC2C Protein PRRC2C yes no 0 0 1 1 0 1 26.011 26.011 3 0.019267 4501 20230619_1880_Aki_TMTPro18x_K_F1 87.696 5.4559 12404 5814.9 16498 13727 22940 20235 15141 18610 17498 9640.2 19866 20885 16642 17588 13738 6098.9 21981 17077 11471 5398.9 16489 13288 23061 19925 15810 18876 17751 10577 20131 20567 16977 17636 14429 6959.4 20918 16122 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7418000 23065 2894 21633 43357 34881 34881 1 9606 Homo sapiens -0.006897617731056016 RLQDSFASETNLDFR Unmodified 1797.8646 0.86457574 4301 Q92621;B4DE72;Q6P486;Q6DKH1;Q4VBX7 NUP205 Nuclear pore complex protein Nup205 yes no 0 0 1 6 0 1 51.556 51.633 3 6.4207E-14 14626 20230619_1886_Aki_TMTPro18x_K_F6 175.7 156.12 61627 58351 62842 60588 56503 65244 71883 59282 68730 53264 69544 71243 54899 54082 74321 61093 71005 62369 57050 53423 63638 61104 59596 65507 71476 60874 70129 54722 70732 70935 57467 56672 74974 61404 67909 59257 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37625000 23066 4301 21634 43358 34882 34882 1 9606 Homo sapiens -0.0024419686387773254 RLQDVSGQLSSSK Unmodified 1403.7369 0.73685603 517 A0A024R8H6;Q15059;B4DS09 BRD3 Bromodomain-containing protein 3 yes no 0 0 1 1.5 0.5 1 1 42.67 42.71 3 0.026322 11105 20230619_1881_Aki_TMTPro18x_K_F2 56.527 37.797 51885 43383 53160 53906 47848 66744 55847 52981 64429 56993 76596 60304 61791 52538 57739 58113 81874 73982 47993 39803 53838 53735 50450 66164 56130 55195 65559 57514 77245 60869 63360 54775 60113 59193 78048 70130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130930000 23067 517 21635 43359;43360 34883 34883 1 9606 Homo sapiens 0.05113707332748163 RLQEALER Unmodified 1013.5618 0.56179219 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;C9J813;Q6PJM5;Q6P707;Q05DR4;C9JEK3 CALD1 Caldesmon yes no 0 0 1 5.67 0.471 1 2 35.919 35.994 3 0.00019821 7976 20230619_1886_Aki_TMTPro18x_K_F6 125.16 23.439 161510 126530 122510 157130 197250 251660 174590 184640 249630 139100 165530 156670 165720 133780 140990 188990 220590 156900 149000 116120 129080 157290 198880 245630 179540 191960 246350 143840 173690 157680 168050 141630 148430 187090 209850 149600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 657980000 23068 3798 21636 43361;43362;43363 34884;34885 34885 2 9606 Homo sapiens 0.055553770490291754 RLQEANMR Unmodified 1016.5185 0.51854717 4729 Q9Y3P9;B7Z2B4 RABGAP1 Rab GTPase-activating protein 1 yes no 0 0 1 7 0 1 28.845 28.954 3 0.0025041 5024 20230619_1887_Aki_TMTPro18x_K_F7 96.034 68.262 33445 26041 37776 40237 47205 50181 39483 43679 54178 36512 44022 42749 39585 33544 45333 39264 48415 38889 30949 23957 38165 39574 48079 49823 40720 44870 53899 37508 45451 42817 40823 35201 46128 39369 46228 36975 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5043600 23069 4729 21637 43364 34886;34887 34886 2 9606 Homo sapiens 0.010948640001060994 RLQEDPNYSPQR Unmodified 1501.7274 0.72735397 731 P46379-3;P46379;P46379-2;A0A7I2V508;A0A0G2JK23;A0A024RCR6;A0A1U9X7A6;A0A1U9X7A9;A0A7P0MQS5;P46379-5;A0A0G2JL47;P46379-4;H0Y710;H0Y4L1 BAG6;BAT3 Large proline-rich protein BAG6 yes no 0 0 1 4.5 0.5 1 1 33.709 33.778 3 2.9854E-13 7046 20230619_1883_Aki_TMTPro18x_K_F4 187.62 161.5 61332 48329 53716 60682 57574 62312 67864 63353 85766 85258 79287 85121 96417 75486 69399 107220 90788 77512 56641 44355 55305 60287 59806 62919 68357 65247 86142 84997 82410 86106 96556 79840 72430 105470 86567 73985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156570000 23070 731 21638 43365;43366 34888 34888 1 9606 Homo sapiens -0.003440609527842753 RLQEETLTK Unmodified 1116.6139 0.61388734 1883 A0A994J7I5;O75525-2;O75525;E5RG12;E5RJZ9;H0YAQ3 KHDRBS3 KH domain-containing, RNA-binding, signal transduction-associated protein 3 yes no 0 0 1 5.5 0.5 1 1 39.389 39.479 3 3.2939E-05 9302 20230619_1885_Aki_TMTPro18x_K_F5 155.53 95.366 365600 280430 335770 374960 286440 289460 338360 359700 404060 413780 571190 586140 471350 456620 472800 470430 644550 581810 337700 257570 343000 369810 302770 300870 340500 364240 414220 420340 573880 582750 484790 475790 490180 478810 614600 551660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 593990000 23071 1883 21639 43367;43368 34889;34890 34889 2 9606 Homo sapiens 0.06024495672136254 RLQEIAQK Unmodified 984.57163 0.5716286 4347 Q99575;Q96F88;E5RK39 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 1 1 0 1 39.318 39.318 3 9.4177E-05 9776 20230619_1880_Aki_TMTPro18x_K_F1 125.04 57.574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23072 4347 21640 43369 34891 34891 1 9606 Homo sapiens 0.07872565054424285 RLQGEVQR Unmodified 984.54648 0.54647648 3352 Q53XM7;O95292;Q6ZSP7;B3KVU7;B4DNS4;Q6ZR82 VAPB Vesicle-associated membrane protein-associated protein B/C yes no 0 0 1 6 0.816 1 1 1 26.285 26.353 3 0.0006321 4952 20230619_1885_Aki_TMTPro18x_K_F5 132.76 64.023 358660 281690 420090 417850 507480 497220 489480 480270 486780 352820 512290 453260 411560 347840 483590 259200 576960 432360 332030 259010 422880 411730 518920 496340 494570 488480 496370 366580 519780 452040 426720 357820 494290 272370 550130 409360 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 339060000 23073 3352 21641 43370;43371;43372 34892;34893;34894 34892 3 9606 Homo sapiens 0.053585102518468375 RLQGQLEQGDDTAAER Unmodified 1785.8606 0.86055299 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 1 1.33 0.471 2 1 35.541 35.569 3 1.8961E-14 7913 20230619_1881_Aki_TMTPro18x_K_F2 177.25 156.87 79300 59138 87171 86862 144410 174490 121590 128060 144000 142400 157880 153690 152600 138650 130330 121460 179480 158080 73346 54381 88791 86515 144980 168630 124600 134300 146020 143550 161040 154940 154950 142630 135560 124430 171100 149840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200600000 23074 1296 21642 43373;43374;43375 34895;34896 34896 2 9606 Homo sapiens -0.0009428635760286852 RLQGQLQGGSR Unmodified 1198.6531 0.65306682 4695 U3KQU7;Q9UP83-3;Q9UP83;Q9UP83-2 COG5 Conserved oligomeric Golgi complex subunit 5 yes no 0 0 1 3.5 0.5 1 1 29.888 29.968 3 5.5743E-07 5547 20230619_1883_Aki_TMTPro18x_K_F4 143.97 87.57 19190 14012 16055 15251 17813 19684 18421 21185 28132 19027 24408 22249 19020 17300 21076 18787 24286 21208 17708 12846 16592 15370 18407 19605 18840 21467 27916 19456 24966 22280 19693 18083 21559 19001 23185 20129 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20092000 23075 4695 21643 43376;43377 34897 34897 1 9606 Homo sapiens 0.061686407463639625 RLQLPVWEYK Unmodified 1330.7398 0.73975656 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 1 4.5 0.5 1 1 56.085 56.121 3 0.00014615 16731 20230619_1883_Aki_TMTPro18x_K_F4 125.23 74.317 53325 47017 51371 62407 54618 77263 58476 62199 84099 81355 71483 98772 91131 79769 66146 132070 114410 123090 49317 43158 52484 61915 56766 76602 59525 65090 83772 81744 74948 98834 91292 85636 70735 131150 109060 116970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 493680000 23076 3246 21644 43378;43379 34898 34898 1 9606 Homo sapiens 0.08761627248213699 RLQNAHTGLDLTVPQHQEVR Unmodified 2311.2145 0.21452466 2978 F6TR53;Q9H7U7;Q53T59;B5MC96;A0A494C0K6 HS1BP3 HCLS1-binding protein 3 yes no 0 0 1 8 0 1 38.438 38.424 5 3.0039E-16 8823 20230619_1888_Aki_TMTPro18x_K_F8 156.29 133.22 16043 12291 15889 11963 15999 16055 12213 13734 17435 15972 12887 13943 15075 12841 16620 13844 16561 16480 14827 11255 16124 12178 16507 15884 12707 14241 17300 15967 13545 14198 15392 13343 16853 14053 15845 15625 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56488000 23077 2978 21645 43380 34899 34899 1 9606 Homo sapiens 0.11136598075518123 RLQQFLEFKE Unmodified 1336.7139 0.71393574 2632 B4DZG6;Q9BTX1-6;Q9BTX1-5;Q9BTX1-2;Q9BTX1;Q9BTX1-3 NDC1 Nucleoporin NDC1 yes no 0 0 2 2 0 1 56.613 56.631 3 0.056783 17264 20230619_1881_Aki_TMTPro18x_K_F2 64.103 53.493 77941 66590 82358 74567 55500 89088 73731 90726 80864 94644 88843 91720 84147 79182 71467 99881 77042 83414 72123 61028 82872 74893 60475 88960 73610 92603 82354 95300 90577 92817 85475 83125 73369 99042 73703 79378 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78305000 23078 2632 21646 43381 34900 34900 1 9606 Homo sapiens 0.05904733005922935 RLQQQQRPEDAEDGAEGGGK Unmodified 2168.0206 0.020635461 3813 Q08J23-2;Q08J23;A0A140T9Y7 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 0 0 2 3 0 1 32.521 32.592 4 4.827E-22 6610 20230619_1882_Aki_TMTPro18x_K_F3 172.57 128.78 40745 30506 31108 37987 42379 41514 41177 43700 52721 48833 48905 51500 46341 45225 38877 54542 56804 44186 37582 28000 32607 37791 43097 41776 41937 44619 52905 49164 50248 51945 47086 47302 40736 54042 54089 42124 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38759000 23079 3813 21647 43382 34901 34901 1 9606 Homo sapiens -0.0166540315117345 RLQQTQNQVDEVVDIMR Unmodified 2071.048 0.048036185 3945 Q6FGG2;Q15836 VAMP3 Vesicle-associated membrane protein 3 yes no 0 0 1 6 0 1 53.763 53.841 3 3.6845E-30 15558 20230619_1886_Aki_TMTPro18x_K_F6 231.86 208.33 60915 56503 55328 57405 58720 65509 65843 70200 77507 65063 69389 71809 73861 65112 85265 83206 73544 86818 56331 51725 56737 58049 60946 65759 66342 71234 77942 66250 71825 72404 75792 68336 85850 83530 70571 82373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 463500000 23080 3945 21648 43383 34902 34902 1 9606 Homo sapiens 0.055354088554395275 RLQSIGTENTEENR Unmodified 1645.802 0.80197548 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;H3BR04;H3BUH7;H3BMQ8 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 1 3 0 1 33.987 34.053 3 1.7139999999999999E-22 7164 20230619_1882_Aki_TMTPro18x_K_F3 235.88 194.79 27997 19928 22104 24367 24082 34460 26478 26616 37810 33889 38924 41148 39288 34586 34321 38495 38682 41070 25822 18292 22998 24367 25022 33879 26906 27923 37903 34099 39905 41212 39859 36092 35252 38757 36985 38972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115790000 23081 3378 21649 43384 34903 34903 1 9606 Homo sapiens 0.004906570679395372 RLQSIGTENTEENRR Unmodified 1801.9031 0.90308651 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;H3BR04;H3BUH7;H3BMQ8 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 2 5.43 1.29 2 2 2 1 30.532 30.584 3;4 3.5374E-18 5747 20230619_1883_Aki_TMTPro18x_K_F4 197.7 169.42 81142 60996 78769 74292 99637 102160 89794 89895 107110 95338 119480 114690 113820 99250 94867 119000 122320 116250 74973 55973 80489 74313 101540 100930 91660 92811 108580 96682 121700 115090 115470 103900 98448 119040 116720 110470 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 11643000000 23082 3378 21650 43385;43386;43387;43388;43389;43390;43391 34904;34905;34906;34907;34908 34905 5 9606 Homo sapiens 0.03421108770635328 RLQTQVFK Unmodified 1018.5924 0.59236404 299 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;A5D904 RPS9 40S ribosomal protein S9 yes no 0 0 1 4.5 0.5 1 1 41.637 41.701 3 6.9519E-05 10308 20230619_1883_Aki_TMTPro18x_K_F4 169.12 118.21 1064400 955550 887400 880150 1175300 1362000 1230100 1176000 1485900 282340 247160 168830 205230 175020 583540 272380 303790 176360 983440 874170 920700 902080 1200700 1336500 1243600 1190200 1446000 332200 310420 177930 229230 185440 569510 267800 292490 168990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1675899999.9999998 23083 299 21651 43392;43393 34909;34910 34909 2 9606 Homo sapiens 0.08381155434096854 RLQVLCPEHSR Unmodified 1393.7249 0.72485155 1597 Q59EC8;A0A669KB29;Q9P0U4;Q9P0U4-2 CXXC1 CXXC-type zinc finger protein 1 yes no 0 0 1 2 0 1 33.781 33.838 4 0.00042311 7234 20230619_1881_Aki_TMTPro18x_K_F2 88.187 75.556 23792 15454 17131 23055 25561 29205 25174 23792 33081 21432 26110 27686 28386 22602 19713 31325 33250 28867 21920 14222 18122 22715 25911 28928 25629 24625 32936 22006 27213 27669 28496 23941 21008 31165 31652 27460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11614000 23084 1597 21652 43394 34911 34911 1 9606 Homo sapiens 0.04373812108565289 RLQYLSSK Unmodified 993.56073 0.56072956 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;Q01433-5;Q01433-3;Q01433-4;A0A7P0Z4H6;H0YF16;A0A804H2H4;A0A590UJX5;A0A590UK85 AMPD2 AMP deaminase 2 yes no 0 0 1 5 0 1 40.983 41.071 3 0.0063576 9987 20230619_1885_Aki_TMTPro18x_K_F5 79.128 51.824 127510 105560 108600 122380 160680 178450 169200 162780 235390 65249 69668 70628 67060 53970 108860 73092 77766 60571 117770 96784 112790 122940 163170 175810 171910 164760 228870 71673 79258 70994 70555 57218 108040 72567 74588 57726 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44109000 23085 1570 21653 43395 34912 34912 1 9606 Homo sapiens 0.06369162680141471 RLSEDYGVLK Unmodified 1178.6295 0.62953741 3538 V9HW12;P32119;B4DF70;A6NIW5 HEL-S-2a;PRDX2 Peroxiredoxin-2 yes no 0 0 1 7 0.816 1 1 1 45.904 45.975 3 1.3194E-05 11889 20230619_1888_Aki_TMTPro18x_K_F8 149.96 93.396 2659600 2136600 2238400 2393700 2582800 2703800 2434100 2301300 2712900 1887900 2122300 1978500 1943200 1807400 2427300 2217300 2253200 2107700 2455800 1958600 2314500 2400700 2651700 2702300 2471300 2368700 2722000 1934900 2197800 2000400 2013300 1890800 2449000 2216300 2156500 2003600 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3198399999.9999995 23086 3538 21654 43396;43397;43398 34913;34914;34915;34916;34917 34917 5 9606 Homo sapiens 0.04736782189161204 RLSEFGLIQEK Unmodified 1318.7245 0.72450043 4531 Q9H845;Q9H9W4;H0Y8Z9;Q9BUX5;A0A7P0T8U3;A0A7P0T871;A0A7P0T7Z1;A0A7P0TB58;A0A7P0T9N9 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 1 1 0 1 51.568 51.568 3 2.5343E-05 14995 20230619_1880_Aki_TMTPro18x_K_F1 139.89 95.697 84383 56979 72036 83729 66059 78597 77747 89649 92660 102280 106800 117210 118660 99688 90333 128660 128340 127810 77847 52418 74187 82268 69499 80078 78232 91140 94167 103100 109460 117720 119400 104930 94663 128660 122420 121410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254810000 23087 4531 21655 43399 34918 34918 1 9606 Homo sapiens 0.0778871566037651 RLSFAVPFR Unmodified 1091.624 0.62399852 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 8 0 1 51.178 51.255 3 0.028474 14082 20230619_1888_Aki_TMTPro18x_K_F8 61.161 26.354 49056 43321 40835 44940 46540 57192 53336 52045 62822 23735 25105 23012 25842 22708 31048 28754 26314 20899 45321 39671 42289 45428 48149 56779 53637 52771 61826 25561 27570 23432 26619 23737 31205 28371 25186 19953 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68702000 23088 3758 21656 43400 34919 34919 1 9606 Homo sapiens 0.0818514818802214 RLSHDNMEEK Unmodified 1257.5772 0.57718426 3960 Q96QC0;Q2L6I0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes no 0 0 1 3.5 0.5 1 1 31.378 31.453 4 0.00067624 6095 20230619_1883_Aki_TMTPro18x_K_F4 91.855 31.421 26154 16569 25584 26346 31806 33852 33753 32315 41826 22425 29030 35468 34449 26625 27940 25514 47154 34232 24145 15263 26138 25889 32597 33610 34149 32862 41575 23623 30663 35097 34689 27712 29563 26156 44841 32469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38400000 23089 3960 21657 43401;43402 34920 34920 1 9606 Homo sapiens -0.04130124216112563 RLSHELAETTR Unmodified 1311.6895 0.6895119 4271 Q8TD16;Q8TD16-2 BICD2 Protein bicaudal D homolog 2 yes no 0 0 1 5 0 1 31.323 31.401 3 0.0026117 6190 20230619_1885_Aki_TMTPro18x_K_F5 88.187 72.296 13625 9602.7 13684 15945 16396 16239 15318 13048 19471 15280 17378 19274 18763 13500 16921 19473 20079 17914 12588 8846.2 13947 15571 16778 16323 15629 13626 19507 15454 18001 19188 19006 14437 17426 19377 19166 17039 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8516800 23090 4271 21658 43403 34921 34921 1 9606 Homo sapiens 0.046134728524066304 RLSNTDGLPR Unmodified 1127.6047 0.60471964 1190 A0A140VJN9;Q9NTJ4-3;Q9NTJ4-2;Q9NTJ4;Q9NTJ4-4;B4DVP6 MAN2C1 Alpha-mannosidase 2C1 yes no 0 0 1 8 0 1 34.517 34.508 3 0.0034244 7295 20230619_1888_Aki_TMTPro18x_K_F8 67.385 38.658 37880 27711 34726 36025 34172 40694 37852 40438 48104 42203 46597 51761 44745 44803 43219 50314 55171 45738 34979 25450 35540 35760 35685 40777 38280 41371 48342 42858 47833 51868 45715 46686 44670 50205 52607 43525 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15528000 23091 1190 21659 43404 34922 34922 1 9606 Homo sapiens 0.04602147106447774 RLSPATENK Unmodified 1014.5458 0.54580778 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2;H3BPA9 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 1 7.5 0.5 1 1 33.365 33.405 3 0.030191 6857 20230619_1888_Aki_TMTPro18x_K_F8 72.582 32.663 27244 16045 33257 34778 52821 43698 37955 38959 33669 23515 38356 23447 28987 20783 36166 14462 27401 20594 25194 14855 33566 33660 52769 43402 39013 39712 34689 24603 38640 23766 30176 21222 36042 15054 26255 19520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18358000 23092 4222 21660 43405;43406 34923 34923 1 9606 Homo sapiens 0.03911670812124157 RLSQEQVDNFTLDINTAYAR Unmodified 2353.1662 0.16623707 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 0 1 7 0 1 55.698 55.759 3 1.0418999999999999E-36 16087 20230619_1887_Aki_TMTPro18x_K_F7 229.46 206.66 51082 48372 54242 60291 56257 57162 61205 62371 68374 67676 57962 62741 69126 58408 69177 75033 64056 72943 47304 44362 54901 59872 58360 58176 61652 63502 68883 67957 60502 63765 70195 61279 70096 75000 61400 69271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44225000 23093 3954 21661 43407 34924 34924 1 9606 Homo sapiens 0.043780596450233134 RLSQIGVENTEENRR Unmodified 1799.9238 0.92382195 26 A0A024QZ64;P09972;B7Z1Y2;B7Z3K9;B7Z1N6;B7Z3K7;A8MVZ9;C9J8F3;J3KSV6;J3QKP5;J3QKK1;B7Z1H6;K7EKH5 ALDOC Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C yes no 0 0 2 5.5 0.5 1 1 33.76 33.823 4 6.1648E-33 7099 20230619_1885_Aki_TMTPro18x_K_F5 245.96 218.63 66801 55200 61244 60880 54158 56789 73214 71754 76029 93021 102160 103040 97662 83846 80669 99168 110440 107010 61731 50589 62572 61014 57302 58112 72826 72840 78374 93113 103370 103480 99030 87936 84072 99794 105360 101570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 464700000 23094 26 21662 43408;43409 34925;34926 34925 2 9606 Homo sapiens 0.055856991503105746 RLSQPESAEK Unmodified 1143.5884 0.58840088 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3;Q69YJ6 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 1 4.5 0.5 1 1 33.628 33.697 3 0.00015317 7036 20230619_1885_Aki_TMTPro18x_K_F5 124.12 70.954 49261 22151 65009 62965 76742 84095 69700 69071 73491 51748 91726 98562 80722 81075 89416 35962 103510 96394 45543 20652 64893 60422 78541 82998 70835 71164 75244 54693 92843 97253 83228 81826 91238 40435 98851 90942 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84151000 23095 2896 21663 43410;43411 34927 34927 1 9606 Homo sapiens 0.022350211497041528 RLSQSDEDVIR Unmodified 1316.6684 0.66844211 1557 A0A7I2YQL3;A0A7P0SXD0;A0A7I2YQQ9;A0A499FIZ0;Q9H7D7-2;Q9H7D7;A0A994J579;H0Y917;A0A7I2V3I7;Q9H7D7-3;Q9H7D7-4 WDR26 WD repeat-containing protein 26 yes no 0 0 1 2.5 0.5 1 1 36.044 36.1 3 0.00031896 8042 20230619_1882_Aki_TMTPro18x_K_F3 91.858 50.458 22991 17808 23301 24554 24095 33636 28737 29068 32593 33945 34816 33650 33004 25037 28422 31847 34948 33967 21254 16361 23676 24352 25145 33192 28826 30130 33080 34031 35523 33876 33507 26490 29360 32002 33368 32243 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87563000 23096 1557 21664 43412;43413 34928 34928 1 9606 Homo sapiens 0.022774627528860947 RLSYNTASNK Unmodified 1152.5887 0.58873523 1905 P49207;A1LUY1 RPL34 60S ribosomal protein L34 yes no 0 0 1 3.5 0.5 1 1 35.324 35.377 3 0.00020898 7723 20230619_1882_Aki_TMTPro18x_K_F3 119.55 62.086 423430 306030 392840 336560 731230 973440 574270 572090 1009200 74033 55666 80219 83153 62444 141680 73817 105700 77646 391010 280610 406630 345500 730870 926110 600420 598320 962640 104040 103390 80904 87223 65642 140650 74434 101290 73811 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 503670000 23097 1905 21665 43414;43415 34929;34930 34929 2 9606 Homo sapiens 0.018544408695561287 RLTCEISTR Unmodified 1134.5815 0.58154136 251 G3V179;E9PMJ2;J3KP39;A0A024R3L8;Q9BPY3 FAM118B;FLJ21103 Protein FAM118B yes no 0 0 1 4.5 3.5 1 1 34.16 34.157 3 0.00013297 7146 20230619_1888_Aki_TMTPro18x_K_F8 136.96 100.62 72599 55202 61192 74821 92333 86459 73804 87712 104290 100660 95963 92838 109400 86225 80271 113530 114620 92935 67013 50711 63634 74074 92912 86600 76446 89802 104250 100810 99370 94414 109840 90612 84207 112410 109180 88567 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 62782000 23098 251 21666 43416;43417 34931;34932 34932 2 9606 Homo sapiens 0.019633849974752593 RLTDADAMK Unmodified 1019.507 0.50697943 3504 V9HW26;P25705;P25705-2;P25705-3;K7ENJ4 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 1 5 0 2 39.375 39.467 3 0.00082213 9299 20230619_1885_Aki_TMTPro18x_K_F5 101.95 9.8918 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23099 3504 21667 43418;43419 34933;34934 34934 2 9606 Homo sapiens -0.0019937781389671727 RLTDLDK Unmodified 859.47633 0.47633123 3474 P18583-5;P18583-9;P18583;P18583-7;P18583-4;P18583-3;P18583-10;P18583-6;P18583-2;H7C1M2;B3KRA1;H7C2G8 SON Protein SON yes no 0 0 1 6 0 1 40.619 40.711 3 0.038124 9834 20230619_1886_Aki_TMTPro18x_K_F6 68.016 14.544 245330 181350 209150 245810 260790 286200 267580 272540 371530 251860 255120 243450 282730 216710 224510 270980 314070 232080 226440 166620 216480 243390 267240 285970 272470 278790 367650 255660 268270 246740 284910 227350 234480 269160 299070 221140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116250000 23100 3474 21668 43420 34935 34935 1 9606 Homo sapiens 0.040972118633817445 RLTEHVQDK Unmodified 1124.5938 0.5938206 4186 Q8NDD3;Q86UL3 DKFZp586M1819;AGPAT6 Glycerol-3-phosphate acyltransferase 4 yes no 0 0 1 6 0 1 31.935 31.969 3 0.012437 6503 20230619_1886_Aki_TMTPro18x_K_F6 63.624 30.567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23101 4186 21669 43421 34936 34936 1 9606 Homo sapiens 0.036507447321810105 RLTELETAVR Unmodified 1186.667 0.66698555 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4Y9;B3KTX4;A8K8J9;F8W1I6;H0YI98;A0A7I2V390;F8VW18;F8VRV7;A0A7I2V5R4 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 0 1 6.5 0.5 1 1 42.672 42.756 3 1.2743E-06 10393 20230619_1887_Aki_TMTPro18x_K_F7 149.96 100.9 349410 242770 281510 317660 305560 301750 320130 324540 391340 317610 303780 299880 351810 283300 317070 364190 327700 327810 322260 223020 292130 314430 315870 306930 324110 329830 391070 320960 317890 304820 355820 297100 323870 362520 313440 311740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 517470000 23102 1406 21670 43422;43423 34937;34938 34938 2 9606 Homo sapiens 0.08111873454799934 RLTLDHEK Unmodified 1010.5509 0.55089316 1803 A0A8Q3WK70;B3KPV5;O00566;A0A8Q3WKH7 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes no 0 0 1 6.5 0.5 1 1 34.795 34.859 4 0.010564 7262 20230619_1887_Aki_TMTPro18x_K_F7 82.645 49.753 124700 89073 110010 143260 161700 186730 161960 159040 225980 42169 58038 51297 49889 43869 65384 49569 72768 57376 115100 82016 113990 140630 164080 184740 165050 161290 219240 49540 67075 51559 52028 45799 66525 50210 69446 54469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54958000 23103 1803 21671 43424;43425 34939 34939 1 9606 Homo sapiens 0.04603974674762412 RLTPTEVK Unmodified 942.54983 0.54983053 609 Q53GF5;A0A024RA52;P25787;A0A7I2YQP7;C9JCK5 PSMA2 Proteasome subunit alpha type;Proteasome subunit alpha type-2 yes no 0 0 1 8 0 1 37.785 37.771 3 0.025518 8601 20230619_1888_Aki_TMTPro18x_K_F8 67.081 30.87 97641 63106 90167 90377 107760 120310 99522 99802 300170 75499 84911 69328 91857 69032 77669 100180 109570 74200 90110 58050 92477 89387 110790 118880 106770 102710 285060 77993 97332 70806 92952 72871 81098 98649 104280 70881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52303000 23104 609 21672 43426 34940 34940 1 9606 Homo sapiens 0.07625760305847962 RLTQNADCVVVLDNTALNR Unmodified 2171.1117 0.11169907 3493 P23258;A0A1B4Z394;A0A7P0T9G6;Q9NRH3;K7EIS0 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain;Tubulin gamma chain yes no 0 0 1 8 0 1 49.733 49.805 3 1.0655E-14 13411 20230619_1888_Aki_TMTPro18x_K_F8 159.26 137.21 29029 20832 32389 36881 24046 35705 26533 24498 37272 30094 35075 34775 38885 31015 36462 42896 29461 35550 26847 19206 32528 35869 25789 35893 26955 25984 37249 30289 36254 34990 39426 32738 36774 42487 28298 33821 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 585580000 23105 3493 21673 43427 34941 34941 1 9606 Homo sapiens 0.07298769292583529 RLTVQTK Unmodified 844.51305 0.51305109 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 1 4 0.816 1 1 1 35.504 35.569 3 0.024489 7729 20230619_1883_Aki_TMTPro18x_K_F4 75.043 32.179 240080 101030 269470 260360 403940 416800 361280 390510 400720 178130 270510 254700 236200 207180 343160 104230 311080 218360 221550 94035 273270 251600 407470 408630 367870 394870 399980 194080 282320 253480 247300 209940 343900 113620 297310 206530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 213250000 23106 2337;3778;3779 21674 43428;43429;43430 34942 34942 1 9606 Homo sapiens 0.08457508479955322 RLTVSSLQESGLK Unmodified 1416.7936 0.79364262 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4DTD5 FLNA;FLJ00119 Filamin-A yes no 0 0 1 3 0 1 47.656 47.735 3 0.00010342 13156 20230619_1882_Aki_TMTPro18x_K_F3 103.67 70.941 373040 335610 390930 396070 425920 494800 447010 446380 551770 414110 404570 446270 425740 379110 474130 465990 487780 454390 345290 307680 396240 396370 440490 491700 452650 458470 550000 421520 423400 449270 436380 397750 481970 466290 466340 431830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2230800000 23107 3484 21675 43431 34943 34943 1 9606 Homo sapiens 0.10191754889274307 RLVEVDSSR Unmodified 1059.5673 0.5672715 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 0 1 4 0.816 1 1 1 33.48 33.548 3 3.599E-06 6938 20230619_1883_Aki_TMTPro18x_K_F4 156.48 117.18 511400 392850 486500 492740 480840 525420 572100 563100 742320 597150 700250 695490 700900 602770 588690 698480 755390 685960 472500 360580 496260 489960 502600 529690 576740 573620 744250 604930 720250 698620 710210 629750 610360 699420 720660 651920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 543830000 23108 1473 21676 43432;43433;43434 34944;34945 34944 2 9606 Homo sapiens 0.03987055840843823 RLVIQDK Unmodified 870.5287 0.52870115 1916 A2RUM7;P46777;Q59GX9;A0A2R8Y4A2;Q9BUV4;R4GNJ2 RPL5 60S ribosomal protein L5 yes no 0 0 1 3.2 2.48 1 2 1 1 39.83 39.867 2;3 0.0053423 10024 20230619_1880_Aki_TMTPro18x_K_F1 110.12 38.736 1550300 1007700 1320500 1426500 1489400 1727300 1563600 1612400 2106600 1708900 1800600 1817700 2180100 1623700 1323500 2209500 2438900 2017100 1429900 926810 1363800 1409700 1537800 1720500 1588800 1657400 2102400 1726200 1877200 1834900 2172100 1713000 1427100 2197400 2319800 1919400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4168799999.9999995 23109 1916 21677 43435;43436;43437;43438;43439 34946;34947;34948 34946 3 9606 Homo sapiens 0.0882579499698295 RLVNAAGSGR Unmodified 999.55738 0.55737552 3446 P13521;B4DQJ6 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 1 3.5 0.5 1 1 28.033 28.125 3 0.00046358 4904 20230619_1883_Aki_TMTPro18x_K_F4 97.734 74.997 31344 21593 31491 43620 27875 29495 38625 43458 51878 38935 56794 50447 46015 42507 38728 41520 66538 50825 28955 19952 31999 42016 29535 31183 38742 43325 52196 39947 57503 50450 47010 44047 41051 42257 63285 48233 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13266000 23110 3446 21678 43440;43441 34949;34950 34950 2 9606 Homo sapiens 0.05757912626131656 RLVPDSDVR Unmodified 1055.5724 0.57235688 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;B3KRA9 HK1 Hexokinase-1;Hexokinase yes no 0 0 1 5 0.816 1 1 1 35.205 35.268 3 0.0034455 7645 20230619_1885_Aki_TMTPro18x_K_F5 98.943 64.135 42587 41998 47306 44552 71578 60668 80393 72860 75307 49270 54591 50851 57075 39410 68111 48338 54026 41163 39465 38453 48016 45041 72462 60456 80320 72948 76097 51123 57116 51196 58626 41530 68171 48103 51739 39220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95929000 23111 43 21679 43442;43443;43444 34951 34951 1 9606 Homo sapiens 0.046793597034593404 RLVPGGGATEIELAK Unmodified 1509.8515 0.85149185 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3 CCT8 T-complex protein 1 subunit theta yes no 0 0 1 5.33 3.09 1 1 1 49.607 49.66 3 7.6638E-14 13365 20230619_1888_Aki_TMTPro18x_K_F8 172.1 152.36 6724700 5864600 6168900 7388500 6398900 6620800 6514700 6575200 7137400 8302500 7924800 7596000 8169900 7050000 8135100 8640900 8280300 8343500 6216400 5380500 6322400 7325000 6629600 6754400 6584000 6768400 7275100 8274700 8103800 7725600 8329100 7374600 8283800 8640100 7921500 7927600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5148600000 23112 3621 21680 43445;43446;43447 34952;34953 34953 2 9606 Homo sapiens 0.11696016814698851 RLVQSPNSYFMDVK Oxidation (M) 1698.8399 0.83994089 3581 P42677;H0YMV8;A4D1G5;Q71UM5;C9JLI6 RPS27;RPS27L;LOC392748 40S ribosomal protein S27;40S ribosomal protein S27-like yes no 0 1 1 2.5 0.5 1 1 50.331 50.406 3 1.8779E-05 14259 20230619_1882_Aki_TMTPro18x_K_F3 124.16 99.109 131620 103290 112620 122870 123340 122840 122050 136370 140030 141250 139760 127750 155980 126070 96156 187390 162560 149660 121530 94751 116180 122520 127200 124580 123750 138460 141700 142070 143950 130420 155860 133330 103000 184920 154800 142600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 723760000 23113 3581 21681 43448;43449 34954;34955 34955 2253 2 9606 Homo sapiens 0.018474517290087533 RLVQSPNSYFMDVK Unmodified 1682.845 0.84502627 3581 P42677;H0YMV8;A4D1G5;Q71UM5;C9JLI6 RPS27;RPS27L;LOC392748 40S ribosomal protein S27;40S ribosomal protein S27-like yes no 0 0 1 3.5 0.5 1 1 53.068 53.107 3 1.1444E-11 15516 20230619_1882_Aki_TMTPro18x_K_F3 177.3 147.32 649390 482480 550990 582880 477350 621430 579730 656600 712370 743100 600840 572890 784620 602910 522420 909890 819790 768330 599380 442740 567070 581050 505610 626050 582960 670270 714440 741170 629260 590890 782470 637450 554380 900230 781140 731450 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2051599999.9999998 23114 3581 21681 43450;43451 34956;34957;34958 34956 3 9606 Homo sapiens 0.030917555916403217 RLVSDGNINSDR Unmodified 1344.6746 0.67459012 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 1 5 0 1 33.684 33.769 3 1.3934E-09 7065 20230619_1885_Aki_TMTPro18x_K_F5 157.22 133.24 45341 28489 41511 40472 47379 56836 50308 53324 64939 57212 61364 64131 65913 54082 55572 72721 69165 65351 41836 26207 42577 40096 48895 56120 51007 54794 65168 57839 63333 64471 66638 57094 57536 72316 66019 62163 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76961000 23115 2337;3778;3779 21682 43452 34959 34959 1 9606 Homo sapiens 0.01603980984396003 RLVTTGVLK Unmodified 985.62842 0.6284152 3399 P07305;P07305-2 H1F0 Histone H1.0;Histone H1.0, N-terminally processed yes no 0 0 1 6 0 1 43.65 43.742 3 4.5469E-07 11114 20230619_1886_Aki_TMTPro18x_K_F6 133.75 89.305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23116 3399 21683 43453 34960 34960 1 9606 Homo sapiens 0.13502612610932374 RLVVFDAR Unmodified 974.56615 0.56614929 570 A0A024R9G0;P53803 POLR2K DNA-directed RNA polymerases I, II, and III subunit RPABC4 yes no 0 0 1 3 0 1 42.971 43.037 3 0.00060668 10921 20230619_1882_Aki_TMTPro18x_K_F3 108.98 77.043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23117 570 21684 43454 34961 34961 1 9606 Homo sapiens 0.0778488626260696 RLWDVSCDLLGLPID Unmodified 1770.8975 0.89745577 1120 A0A0S2Z583;Q8TC12;Q8TC12-2;Q8TC12-3;H0YJ46;B3KQ19 RDH11 Retinol dehydrogenase 11 yes no 0 0 1 7 0 1 65.72 65.745 2 2.1009E-07 20425 20230619_1887_Aki_TMTPro18x_K_F7 180.19 162.38 12506 9610.2 14771 15587 9259 13714 13980 13732 12024 11449 15425 13914 10870 11746 14395 15990 15280 13413 11577 8847.1 14743 15218 10194 13993 13775 13976 12479 11766 15464 13959 11424 12393 14633 15853 14598 12774 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116970000 23118 1120 21685 43455 34962 34962 1 9606 Homo sapiens 0.042842939346428466 RLWGDIYFNPK Unmodified 1407.7299 0.72992016 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 1 4.5 0.5 1 1 57.661 57.692 3 0.00036493 16941 20230619_1885_Aki_TMTPro18x_K_F5 101.39 64.282 114560 95365 112940 118600 95968 119270 123160 109750 154940 145140 142130 139910 158290 119300 120480 161280 140080 160250 105930 87496 114660 117880 101910 120320 123570 113780 155530 144680 147070 141590 159150 126050 124500 161200 133970 152150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 263200000 23119 2436 21686 43456;43457 34963 34963 1 9606 Homo sapiens 0.04236439242845336 RLYWDDLK Unmodified 1107.5713 0.57129425 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TND0;A0A8V8TLK4 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 1 1 0 1 51.568 51.568 3 0.0010218 15017 20230619_1880_Aki_TMTPro18x_K_F1 120.33 78.348 210750 168130 185540 178700 129600 187200 123000 134370 196510 165270 137990 150060 205700 166610 125850 279170 236690 223000 194650 154060 189670 179780 139460 187420 126830 141790 193770 165100 147260 153820 204120 177240 136330 275070 225300 212450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208020000 23120 1817 21687 43458 34964 34964 1 9606 Homo sapiens 0.02181145334543544 RLYYEGLQDK Unmodified 1283.651 0.65100113 1103 O14964;A0A7I2V3F9;A0A7I2V5A3;A0A7I2V3Z1;A0A7I2V6E0;A0A7I2V2K2;A0A7I2V5A2;A0A7I2V3I8;A0A7I2V2D8;A0A7I2V2W5;A0A7I2V2R9;A0A7I2V3J3;A0A0S2Z4R4;A0A7I2V637;B4E1E2;A0A0S2Z4Q4;O14964-2;A0A7I2YQD1;A0A7I2V307;I3L1E3 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 1 7.5 0.5 1 1 45.695 45.758 3 0.0069206 11834 20230619_1888_Aki_TMTPro18x_K_F8 71.159 41.352 44709 36653 44490 49185 42507 52264 52485 53811 62784 57939 57835 55891 55512 50738 56971 62428 65222 70478 41340 33658 45223 48675 44629 52628 52661 54970 63166 58279 59466 56673 56837 53130 58393 62977 62361 66836 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156830000 23121 1103 21688 43459;43460 34965 34965 1 9606 Homo sapiens 0.020521672179029338 RMATEVAADALGEEWK Oxidation (M) 1791.8461 0.84614848 1910 Q96DV6;A2A3R6;P62753;A2A3R7 RPS6 40S ribosomal protein S6 yes no 0 1 1 5 0.816 1 1 1 52.891 52.947 3 0.0066717 15327 20230619_1883_Aki_TMTPro18x_K_F4 83.252 67.625 50321 40070 45675 55772 44569 44489 46139 54424 52472 58902 59325 63306 67615 52503 61282 67378 57360 58408 46487 36814 46817 54874 46405 46076 46670 55030 53418 59386 60938 63699 68396 55305 62246 66957 54927 55567 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 340600000 23122 1910 21689 43461;43462;43463 34966 34966 1227 1 9606 Homo sapiens -0.018100748300867053 RMATEVAADALGEEWK Unmodified 1775.8512 0.85123386 1910 Q96DV6;A2A3R6;P62753;A2A3R7 RPS6 40S ribosomal protein S6 yes no 0 0 1 7 1 1 1 56.259 56.316 3;4 0.0010455 16910 20230619_1886_Aki_TMTPro18x_K_F6 74.338 50.857 44275 29076 42962 45020 50219 52853 50553 44074 90690 56528 44710 53389 60506 48635 46328 63289 54178 53603 40879 26769 43871 44230 51661 52640 52126 45982 88220 56470 48761 54151 60591 51102 47885 62775 51757 51017 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59931000 23123 1910 21689 43464;43465 34967;34968 34967 2 9606 Homo sapiens -0.00565770967455137 RMDAPASAAAVR Unmodified 1214.619 0.6189895 3062 H3BLU7;V9HWA2;O43488;B4DZX4 AKR7A2;HEL-S-166mP Aflatoxin B1 aldehyde reductase member 2 yes no 0 0 1 7.5 0.5 1 1 33.269 33.31 3 3.7452E-07 6823 20230619_1888_Aki_TMTPro18x_K_F8 129.29 90.932 44146 37516 44866 43699 55178 66021 56175 57905 69548 26826 33017 29814 26823 26321 45353 26549 44075 29817 40836 34396 45676 43924 56581 64857 56966 58866 68483 28952 35341 30050 28501 27266 45609 26923 42085 28338 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42866000 23124 3062 21690 43466;43467 34969 34969 1 9606 Homo sapiens 0.020264762630631594 RMDDPECYFNSLPK Oxidation (M) 1786.7655 0.76545532 2607 B4DW13;Q6YP21-3;Q6YP21 hCG_23341;CCBL2 Kynurenine--oxoglutarate transaminase 3 yes no 0 1 1 6 0 1 52.3 52.377 3 0.002529 14953 20230619_1886_Aki_TMTPro18x_K_F6 95.57 77.869 45565 34090 40999 52247 42989 43514 45652 41069 49905 55684 71581 63606 64507 57571 54356 74530 72274 80855 42075 31364 42119 51118 44547 44607 46021 42561 51456 55731 72041 64072 65604 60477 56557 74908 69037 76698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63104000 23125 2607 21691 43468 34970 34970 1570 1 9606 Homo sapiens -0.09645679144637143 RMDDPECYFNSLPK Unmodified 1770.7705 0.7705407 2607 B4DW13;Q6YP21-3;Q6YP21 hCG_23341;CCBL2 Kynurenine--oxoglutarate transaminase 3 yes no 0 0 1 6.5 0.5 1 1 55.816 55.883 3 0.0013547 16402 20230619_1886_Aki_TMTPro18x_K_F6 78.069 65.514 54873 38658 39544 48931 35708 42566 46245 46923 49587 75646 74169 79273 78930 70488 63333 83631 74683 85895 50578 35499 41447 48484 37740 43627 46147 48410 51413 74967 75167 79983 79680 73684 65419 83898 71424 81518 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99470000 23126 2607 21691 43469;43470 34971 34971 1 9606 Homo sapiens -0.08401375282028312 RMDERPIHAEPQYPVR Oxidation (M) 2008.9901 0.99012738 704 C9J126;A0A024RC42;P19022-2;P19022;A0A6Q8PHJ8;A0A6Q8PG20 CDH2 Cadherin-2 yes no 0 1 2 5.5 0.5 2 2 31.544 31.601 4;5 4.8705E-08 6266 20230619_1885_Aki_TMTPro18x_K_F5 123.29 108.37 14664 12003 14391 14632 19281 15385 17601 15851 18287 14919 14657 14756 19574 16423 14020 15842 17772 19158 13557 11012 14710 14574 19546 15529 17859 16142 18450 15132 15422 15045 19560 16864 14570 16110 16977 18156 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46791000 23127 704 21692 43471;43472;43473;43474 34972;34973 34972 426 2 9606 Homo sapiens 0.025991917207193183 RMEELHNQEMQK 2 Oxidation (M) 1603.7083 0.70827479 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 2 1 3.5 0.957 1 2 2 1 26.607 26.7 4 0.0027327 4909 20230619_1881_Aki_TMTPro18x_K_F2 72.089 49.369 448890 338500 433470 460240 681040 543540 565590 559070 624740 538000 599320 583170 537840 492460 518590 612530 660750 551130 414750 310990 445260 455840 683100 544120 578670 569450 631990 546310 613320 587140 550390 517010 536010 609950 630070 524520 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 831440000 23128 1450 21693 43475;43476;43477;43478;43479;43480 34974;34975;34976;34977 34974 948;949 4 9606 Homo sapiens -0.06943101630372439 RMEELHNQEMQK Oxidation (M) 1587.7134 0.71336017 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 1 1 3.71 0.7 3 3 1 32.088 32.158 3;4 0.00023204 6531 20230619_1882_Aki_TMTPro18x_K_F3 109.16 81.749 182010 139200 186410 188740 230110 232740 224570 217030 251060 203730 235000 219840 235860 194590 219440 215490 255790 207120 168260 127880 189650 187090 235230 231660 227540 222450 253480 207190 241810 221680 239910 202670 225390 215800 244050 196990 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1276200000 23129 1450 21693 43481;43482;43483;43484;43485;43486;43487 34978;34979;34980;34981;34982 34979 948;949 5 9606 Homo sapiens -0.05698797767763608 RMEELHNQEMQK Unmodified 1571.7184 0.71844555 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 1 4 0 1 35.941 35.989 4 2.9891E-05 7913 20230619_1883_Aki_TMTPro18x_K_F4 122.34 101.25 301400 216790 253640 262590 268250 329440 309020 284720 342330 332660 328320 298280 366150 282690 292570 386870 365920 330860 278120 198960 261970 262300 278970 326960 310180 295240 346370 332680 338910 304080 368880 297720 303350 383680 349160 314980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 892020000 23130 1450 21693 43488 34983;34984 34983 2 9606 Homo sapiens -0.04454493905154777 RMEELHNQEVQK Oxidation (M) 1555.7413 0.74128948 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;H7C367;C9JYS8 NONO Non-POU domain-containing octamer-binding protein yes no 0 1 1 3.88 1.05 1 2 2 3 31.294 31.369 3;4 0.00014547 6190 20230619_1881_Aki_TMTPro18x_K_F2 114.82 62.262 111170 86998 102530 114440 151080 141010 127340 129140 160110 130360 151510 145390 154230 126010 138420 142830 167470 140900 102700 79885 105640 113640 152320 140360 130760 132770 160850 132210 155920 146300 156570 131520 142650 143160 159770 133940 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1983399999.9999998 23131 1112 21694 43489;43490;43491;43492;43493;43494;43495;43496 34985;34986;34987;34988;34989;34990 34985 696 6 9606 Homo sapiens -0.014351515160342387 RMEELHNQEVQK Unmodified 1539.7464 0.74637486 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;H7C367;C9JYS8 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 1 4 0.816 1 1 1 35.133 35.198 3 9.2716E-10 7609 20230619_1883_Aki_TMTPro18x_K_F4 178.15 135.41 92432 74711 87942 88523 102990 103820 99774 100020 124670 111080 129190 115700 130160 100000 103360 132130 144370 125580 85428 68521 89924 88488 105670 103780 101570 102730 125730 111840 132240 116810 131500 105410 107990 131810 137610 119410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 192070000 23132 1112 21694 43497;43498;43499 34991;34992 34991 2 9606 Homo sapiens -0.001908476534026704 RMEELHNQEVQKR Oxidation (M) 1711.8424 0.84240051 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;H7C367;C9JYS8 NONO Non-POU domain-containing octamer-binding protein yes no 0 1 2 5 0 1 28.184 28.257 5 0.016123 5087 20230619_1885_Aki_TMTPro18x_K_F5 61.167 47.22 9436.9 15104 15810 14685 28873 16520 28738 23749 32095 19836 17677 11805 13061 12670 40460 18044 17956 18775 8826.9 13803 15712 14912 28808 16781 29045 23657 31899 20032 18631 12405 14777 13330 39295 18156 17404 17822 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11036000 23133 1112 21695 43500 34993 34993 696 1 9606 Homo sapiens 0.014953001866615523 RMGESDDSILR Oxidation (M) 1293.5983 0.59831364 3742 Q8WVC2;Q6FGH5;P63220 RPS21 40S ribosomal protein S21 yes no 0 1 1 2 0.816 1 1 1 32.98 33.023 3 0.00081305 6853 20230619_1881_Aki_TMTPro18x_K_F2 132.62 106.58 207090 158580 176490 193280 238540 235490 197680 210390 228810 227470 252170 241460 234990 210670 218510 247690 259270 248660 191180 145510 182810 192880 241670 234440 202720 217070 232340 229410 256790 243520 239700 220230 224890 248300 247600 236210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1544099999.9999998 23134 3742 21696 43501;43502;43503 34994 34994 2416 1 9606 Homo sapiens -0.036741589072335046 RMGESDDSILR Unmodified 1277.6034 0.60339901 3742 Q8WVC2;Q6FGH5;P63220 RPS21 40S ribosomal protein S21 yes no 0 0 1 2.5 0.5 1 1 37.792 37.85 3 4.1422E-07 8823 20230619_1881_Aki_TMTPro18x_K_F2 167.18 134.09 346650 382820 330110 326420 322860 362220 358110 371250 394410 420710 393200 365200 444510 337730 320870 510080 470190 436970 321110 349800 336580 335200 336970 364120 360280 379850 400000 420770 405400 372670 446060 358540 337730 505110 448200 415930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1272700000 23135 3742 21696 43504;43505 34995;34996 34995 2 9606 Homo sapiens -0.024298550446019362 RMGHAGAIIAGGK Oxidation (M) 1253.6663 0.66627404 2059 Q6IAL5;B2R8A1;A8K4W7;P53597 SUCLG1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes no 0 1 1 4 0 1 31.786 31.847 4 0.029284 6272 20230619_1883_Aki_TMTPro18x_K_F4 62.924 33.625 24084 17805 27646 29081 47884 36692 35556 46221 36388 28258 36416 33545 28067 32400 33912 28359 41905 31712 22284 16396 28081 28538 47661 36761 36614 46035 37003 29675 36990 33799 29257 33207 34786 28778 39947 30122 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18042000 23136 2059 21697 43506 34997 34997 1291 1 9606 Homo sapiens 0.049587555340849576 RMGPGAASGGERPNLK Oxidation (M) 1612.8104 0.8103721 4495 Q9H0U4;E9PLD0;Q6FIG4 RAB1B Ras-related protein Rab-1B yes no 0 1 2 2.5 0.5 1 1 31.688 31.758 4 0.028437 6370 20230619_1881_Aki_TMTPro18x_K_F2 51.593 38.613 77456 50662 53750 76941 62142 73642 70046 79424 107320 95549 109620 148680 125220 123390 69431 192580 179930 188480 71350 46632 56846 75442 64270 74807 71319 81185 107270 97334 113210 147720 124920 131640 78370 191770 171150 179030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239420000 23137 4495 21698 43507;43508 34998 34998 2793 1 9606 Homo sapiens 0.028479325035959846 RMGPGAASGGERPNLK Unmodified 1596.8155 0.81545747 4495 Q9H0U4;E9PLD0;Q6FIG4 RAB1B Ras-related protein Rab-1B yes no 0 0 2 3.5 0.5 1 1 34.873 34.929 4 7.0857E-08 7518 20230619_1882_Aki_TMTPro18x_K_F3 127.88 96.665 74205 46853 45565 67927 46757 73377 52833 63528 99748 87649 93522 125850 134640 127180 57722 188340 188270 189710 68299 43110 48841 66872 48989 73482 54372 66225 98709 88528 98134 126170 132720 134290 67973 187910 178890 180170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172530000 23138 4495 21698 43509;43510 34999 34999 1 9606 Homo sapiens 0.040922363662048156 RMIETAQVDER Oxidation (M) 1362.6562 0.65616287 658 Q9UL25;A0A024RBA9;Q96GX3 RAB21 Ras-related protein Rab-21 yes no 0 1 1 2.5 0.5 1 1 30.936 31.011 3 0.044684 6081 20230619_1881_Aki_TMTPro18x_K_F2 76.24 51.949 43055 32586 45258 42108 49741 46604 46019 45408 54182 55621 62272 57117 57816 53521 51724 58464 63462 60012 39810 29920 45825 41811 51149 46781 46889 46743 55068 55715 63272 57810 58894 55572 53388 58745 60583 56996 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67768000 23139 658 21699 43511;43512 35000 35000 405 1 9606 Homo sapiens -0.01065896981822334 RMNLAEK Oxidation (M) 876.44874 0.44873627 4823 yes yes 0 1 1 7.67 0.471 1 2 33.23 33.259 3 0.054891 6777 20230619_1888_Aki_TMTPro18x_K_F8 117.4 63.194 + 395180 143220 623870 500750 723950 1133000 622150 744210 102560 244250 390900 438550 340100 311920 631100 161840 442740 268770 365890 134440 615910 483670 742080 1086700 618280 773020 146020 278980 386610 432010 362330 317860 623510 172690 424220 254780 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 489610000 23140 4823 21700 43513;43514;43515 35001 35001 2926 1 9606 Homo sapiens 0.005569853315023465 RMPPPANLPSLK Unmodified 1319.7384 0.73837635 2894;1307;4040 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-3;P48634;A0A1U9X982;A0A1U9X9A9;A0A1U9X999;A0A1U9X998;A0A1U9X993;A0A1U9X988;A0A1U9X996;A0A1U9X985;A0A1U9X977;A0A1U9X975;A0A1U9X974;A0A1U9X9A5;A0A1U9X987;A0A1U9X972;P48634-3;P48634-2;P48634-4;B4DZ56;Q5JSZ5;Q5JSZ5-5;Q9BU62 PRRC2C;PRRC2A;PRRC2B;BAT2L Protein PRRC2C;Protein PRRC2A;Protein PRRC2B no no 0 0 1 5.5 0.5 1 1 47.857 47.935 3 0.00075941 12838 20230619_1885_Aki_TMTPro18x_K_F5 92.151 44.485 71626 64196 70076 65208 67802 80791 84023 73470 81896 69273 76379 64315 79000 61145 72647 81478 79772 76448 66258 58774 71269 66024 71064 80361 83693 75469 83282 70117 78669 65496 80210 64282 74425 81243 76233 72676 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58086000 23141 2894;1307;4040 21701 43516;43517 35002 35002 1 9606 Homo sapiens 0.09129669887806813 RMQALEPYPANESSK Unmodified 1719.825 0.82501911 2131 A8K946;O43148;O43148-2;B7Z3U8;K7EP06 RNMT mRNA cap guanine-N7 methyltransferase yes no 0 0 1 7 0 1 43.279 43.358 3 1.3477E-10 10642 20230619_1887_Aki_TMTPro18x_K_F7 155.57 140.58 33657 28121 30986 33708 32583 38818 35509 37264 35696 40686 44653 44037 41137 39942 42548 49200 43410 42834 31105 25791 31744 33652 33818 38824 35657 38261 36728 41025 45244 44434 42192 41789 43327 48922 41522 40753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38624000 23142 2131 21702 43518 35003 35003 1 9606 Homo sapiens -0.006100401389403487 RMQEVYNFNAINNSEIR Oxidation (M) 2113.0011 0.0010859926 1222 A0A140VK27;P09960;B4DVZ8;P09960-4;Q49AK0 LTA4H Leukotriene A-4 hydrolase;Leukotriene A(4) hydrolase yes no 0 1 1 8 0 1 46.049 46.087 3 0.001521 11922 20230619_1888_Aki_TMTPro18x_K_F8 63.337 54.843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23143 1222 21703 43519 35004 35004 758 1 9606 Homo sapiens -0.010894506955537508 RMQSLSLNK Oxidation (M) 1091.5757 0.5757277 3851 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 1 1 3 0 1 37.275 37.329 3 0.040891 8502 20230619_1882_Aki_TMTPro18x_K_F3 52.49 27.567 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23144 3851 21704 43520 35005 35005 2529 1 9606 Homo sapiens 0.03360286485826691 RMSELCIDFNK Unmodified 1411.6588 0.6588054 2141 A8K9T8;Q9BYT8;B3KU23;E9PCB6;Q9BQD0 NLN Neurolysin, mitochondrial yes no 0 0 1 1 0 1 52.072 52.072 3 0.00033728 15211 20230619_1880_Aki_TMTPro18x_K_F1 103.44 80.322 35390 28993 31552 40034 29888 39422 36405 39851 49981 41297 39057 37865 45573 39149 36037 49814 43152 42951 32695 26632 32406 39496 31436 39893 36748 40716 49697 41579 40852 38665 45867 40898 37282 49464 41217 40869 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56615000 23145 2141 21705 43521 35006 35006 1 9606 Homo sapiens -0.030557648485000755 RMSSEGPPR Unmodified 1015.4869 0.48691269 2986 F8W0B5;A0A2R8Y7P6;V9GY86;Q2M2R5;F8WB06;F8VQP2;A0A2R8Y5A6;A0A2R8YDM9;Q99700;A0A2R8Y7E6;H0YH87;A0A5F9ZHX3;A0A5F9ZHW5;Q99700-5;Q99700-2;Q99700-4;A0A5F9ZI57;B3KT59 ATXN2 Ataxin-2 yes no 0 0 1 6 0 1 26.401 26.437 3 0.0016193 4586 20230619_1886_Aki_TMTPro18x_K_F6 94.309 47.883 20086 9884.2 19726 14099 15639 11471 13442 14352 11898 11329 14748 16118 15770 10920 12099 11855 16402 15921 18524 9105.3 19958 13873 16460 11878 13660 14388 12323 11746 15049 15965 15872 11499 12602 12126 15648 15080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5420500 23146 2986 21706 43522 35007 35007 1 9606 Homo sapiens -0.020211287538245415 RMTGSEFDFEEMK 2 Oxidation (M) 1637.6702 0.67015795 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q8TB95;B3KVE3 GDI2 Rab GDP dissociation inhibitor beta yes no 0 2 1 3 1 1 1 44.236 44.299 3 0.032795 11831 20230619_1881_Aki_TMTPro18x_K_F2 44.311 13.873 76428 56425 70945 70460 80950 74632 68451 72078 77082 88298 97318 102070 99959 80140 83421 105260 94183 103140 70586 51796 72638 70071 82865 75141 70067 74245 78916 88750 99025 102250 101110 84725 85839 105190 90072 97952 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119890000 23147 2533 21707 43523;43524 35008 35008 1541;1542 1 9606 Homo sapiens -0.12317032335681688 RMTGSEFDFEEMK Oxidation (M) 1621.6752 0.67524333 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q8TB95;B3KVE3 GDI2 Rab GDP dissociation inhibitor beta yes no 0 1 1 4 0.816 2 2 2 48.543 48.607 3 0.015956 13143 20230619_1882_Aki_TMTPro18x_K_F3 86.803 73.39 805750 696290 736380 749310 791720 870280 782410 871910 888070 958430 943710 869680 941230 804940 913250 1071100 986680 967340 744780 637880 754650 754360 818000 871160 793170 892460 901560 961090 965100 885260 959450 846460 934080 1065800 943200 919960 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1189300000 23148 2533 21707 43525;43526;43527;43528;43529;43530 35009;35010 35009 1541;1542 2 9606 Homo sapiens -0.11072728473072857 RMTGSEFDFEEMK Unmodified 1605.6803 0.68032871 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q8TB95;B3KVE3 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 1 4.5 1.12 1 1 1 1 52.429 52.487 3 0.0016516 14844 20230619_1885_Aki_TMTPro18x_K_F5 79.771 53.23 247240 192200 238920 238730 205180 269620 229690 256410 271730 341920 311090 307230 362470 293040 265820 392030 350140 356350 228480 176380 242920 237710 216870 269890 231690 265010 276440 339820 319430 313070 363670 308050 277360 389980 334240 338820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 305460000 23149 2533 21707 43531;43532;43533;43534 35011 35011 1 9606 Homo sapiens -0.09828424610464026 RMVSSYVGENAEFER Unmodified 1772.8152 0.8151827 76 A0A024R040;P55809;Q6IAV5;A1E286 OXCT1;OXCT Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes no 0 0 1 5 0 1 44.292 44.37 3 1.3878E-07 11393 20230619_1885_Aki_TMTPro18x_K_F5 102.69 81.736 71464 60467 72829 85312 72597 86568 73697 88267 88253 101820 96065 91990 110860 87804 78198 113520 106980 107700 66105 55550 73941 84099 75522 87444 74762 90375 89499 101850 98772 93728 111100 92108 81875 113230 102080 102350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15514000 23150 76 21708 43535 35012 35012 1 9606 Homo sapiens -0.04031228144299348 RMVVPAALK Unmodified 983.59501 0.59500658 1419 A0A7I2V5L3;Q9BSQ6;Q53H34;A0A384ME37;M0QYS1;P40429;A0A7I2V2L9;Q5QTS3;Q8J015;Q0VGL3;Q6NVV1 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 yes no 0 0 1 5.5 0.5 1 1 45.361 45.443 3 0.0030977 11880 20230619_1886_Aki_TMTPro18x_K_F6 86.136 43.266 120830 112320 88639 100200 152500 394430 143910 145190 400670 66861 75998 85007 79880 58458 67170 82672 90777 78655 111570 102720 94061 105810 155590 370160 153080 163240 379520 73344 93347 84642 80939 62475 69909 82416 86542 74794 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192920000 23151 1419 21709 43536;43537 35013 35013 1 9606 Homo sapiens 0.10255287567383675 RMYEQQR Unmodified 1009.4763 0.47634801 4635 Q9NZZ3;Q9NZZ3-2 CHMP5 Charged multivesicular body protein 5 yes no 0 0 1 6 0 1 26.371 26.406 3 0.038213 4558 20230619_1886_Aki_TMTPro18x_K_F6 67.981 51.827 15778 7668.8 16973 19411 22361 25494 21919 25406 28142 22756 8691.5 6571.9 6741 5876.2 8943.9 4431.2 8782.9 4873.4 14562 7128.3 17242 18692 22800 25287 22308 25861 27560 22655 9737.7 7352.1 7057.5 6026.2 9020 4517.9 8377.9 4638.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16105000 23152 4635 21710 43538 35014 35014 1 9606 Homo sapiens -0.028011114082687527 RNAAPPPSNTEAPPGETR Unmodified 1860.9078 0.90783753 3008 G3V529;Q9GZR7;B4DM03;B4DKV2;Q9GZR7-2;Q59FS7;A0A1W2PRR2;F5GYL3;B4E300 DDX24 ATP-dependent RNA helicase DDX24 yes no 0 0 1 3.5 0.5 1 1 29.77 29.85 3 1.5405E-13 5444 20230619_1883_Aki_TMTPro18x_K_F4 146.81 135.01 4559.8 3042.5 3599.8 4749.5 7223.2 7393.5 6036.6 5890.3 6890.2 5805.5 7884.8 9808.4 9267.8 7689.6 2929.7 13519 13477 11006 4204.1 2801.2 3798.3 4685.1 7182.8 7239.6 6178.5 6119.5 7008.1 5996 8105.8 9714.7 9125.3 8302.4 3730.5 13317 12776 10490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46525000 23153 3008 21711 43539;43540 35015;35016 35016 2 9606 Homo sapiens 0.011819929134162521 RNAEFLTCNIPTSNASNNMVTTEK Oxidation (M) 2727.2592 0.25922753 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;A0A3B3ISX1;A0A3B3ITG9;A0A7P0TA14;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 1 1 8 0 1 47.884 47.942 4 2.6648E-08 12648 20230619_1888_Aki_TMTPro18x_K_F8 107.56 95.126 27929 23340 22225 32193 39257 41277 33700 33836 39242 35088 30675 38297 34444 25243 33704 36325 33579 35081 25785 21438 23367 31871 39284 40876 34451 35113 39343 35494 32099 38259 34975 27069 34294 36248 32140 33328 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103760000 23154 1718;4020 21712 43541 35017 35017 1122 1 9606 Homo sapiens -0.035311717462263914 RNCFASVFEK Unmodified 1256.5972 0.59719142 3234 Q53R19;O15144;A0A024R408;Q9BXV5 ARPC2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 1 3 0 1 48.69 48.77 3 0.0003707 13571 20230619_1882_Aki_TMTPro18x_K_F3 111.94 76.522 388550 291040 313740 392440 420410 505450 391140 424460 469880 189040 168830 158190 183160 146920 228830 223830 208080 150120 358520 267360 327050 389210 428100 500390 398330 432840 461470 203280 188100 161970 188760 155940 230690 219610 198880 143580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231110000 23155 3234 21713 43542 35018 35018 1 9606 Homo sapiens -0.020843284854890953 RNDFQLIGIQDGYLSLLQDSGEVR Unmodified 2735.3879 0.38785716 3110 I3L397;I3L504;P63241;P63241-2 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 yes no 0 0 1 8 0 1 63.553 63.575 3 8.9959E-35 19325 20230619_1888_Aki_TMTPro18x_K_F8 211.64 197.48 123280 94109 118740 140490 95512 118160 118790 113200 141520 140750 150650 171940 177350 169270 158090 192850 163570 197080 113910 86548 120790 137690 101810 121000 119170 116830 143270 141760 155460 173050 179360 175840 161610 193560 156680 187020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1222600000 23156 3110 21714 43543 35019;35020 35019 2 9606 Homo sapiens 0.08957874550651468 RNDLDDPER Unmodified 1128.516 0.51596421 3931 Q15393;A8K6V3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 1 1 0 1 29.447 29.447 3 0.02793 5747 20230619_1880_Aki_TMTPro18x_K_F1 61.435 34.106 33344 20612 39271 34043 46756 50469 40023 38143 50699 36945 43853 43437 43532 36803 43393 29817 46389 37191 30831 18999 39476 33473 47786 49486 41076 39786 50733 37640 45302 43554 44433 37821 44211 30543 44292 35279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86097000 23157 3931 21715 43544 35021 35021 1 9606 Homo sapiens -0.04315312923858983 RNEDEDSPNK Unmodified 1202.5164 0.51635814 2204 B2R4C1;P62899;H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899-2;Q76N53 RPL31 60S ribosomal protein L31 yes no 0 0 1 1 0 1 28.394 28.394 3 0.00024119 5361 20230619_1880_Aki_TMTPro18x_K_F1 110.93 67.42 7508.7 3990.6 12696 12233 30936 27832 12210 33829 13474 4865.6 15411 26286 7204.2 18848 16225 4180.6 23972 23640 6967.6 3723.2 12723 11872 30128 27079 13495 33292 13704 7101.1 15450 25427 8139.7 18864 16698 5569.3 22859 22249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11660000 23158 2204 21716 43545 35022 35022 1 9606 Homo sapiens -0.07679937994680586 RNEELEEQCVQHGR Unmodified 1782.8067 0.80674328 999 A0A0G2JR20;A0A0C4DG71;B4DLQ4;A0A0G2JQM2;B4DRG8;A0A0G2JR50;B4DRD9;Q86SQ7-3;Q86SQ7-4;Q86SQ7 SDCCAG8 Serologically defined colon cancer antigen 8 yes no 0 0 1 2 0 1 28.571 28.645 4 1.8819E-10 5235 20230619_1881_Aki_TMTPro18x_K_F2 169.79 155.54 3253.8 2476.4 3603.2 3027.2 5174.7 4109.4 3249 5017.1 5392.3 4453.4 4190.3 5255.5 6230.3 3520.5 5068.5 4093.8 5738.7 5022.2 3010 2272.5 3648.2 3029.1 5190.1 4097.8 3458.3 5040.1 5327.6 4553.9 4451.2 5234.7 6227.4 3728.2 5205 4159.8 5479.3 4762.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8664900 23159 999 21717 43546 35023 35023 1 9606 Homo sapiens -0.05334782060958787 RNEFLGELQK Unmodified 1232.6513 0.65133548 1492;3875 D6RGI3;A0A384P5S0;D6RER5;Q9NVA2;Q9NVA2-2;D6RDU5;Q96KC0;H0Y961;Q14141;Q541S4;Q548C9;B1AMS2;Q6B514;B4DZW0;Q8NFH9;Q14141-2;Q14141-4;B4DPT4;Q6NT82;B4E049;Q8NFI2;Q8NFI0 SEPT11;SEPT6 Septin-11;Septin-6 no no 0 0 1 7.67 0.471 1 2 47.653 47.726 3 2.9689E-07 12517 20230619_1888_Aki_TMTPro18x_K_F8 136.96 33.873 327500 258700 298570 328470 269770 330350 371720 350500 403550 407330 388900 385080 467080 363040 359500 501320 441880 431860 302550 237450 305550 326020 285520 334280 369810 358250 408850 407940 403020 391400 468960 382610 372780 497240 421930 410960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1407800000 23160 1492;3875 21718 43547;43548;43549 35024;35025 35025 2 9606 Homo sapiens 0.04431586937744214 RNEGVVGGEDYEEVDR Unmodified 1821.8129 0.8129341 3070 H3BPG6;Q86UK7-2;Q86UK7-3;Q86UK7 ZNF598 Zinc finger protein 598 yes no 0 0 1 1 0 1 37.79 37.79 3 8.8809E-12 9134 20230619_1880_Aki_TMTPro18x_K_F1 167.05 145.21 30121 21650 34115 33277 26913 36319 32153 33056 40592 31513 40325 43261 43918 42108 35830 41045 41181 49622 27862 19923 34216 32680 28719 36387 32395 33964 40821 32315 41554 43352 44358 43401 36903 41731 39408 47010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77044000 23161 3070 21719 43550 35026 35026 1 9606 Homo sapiens -0.06509985348407099 RNEIDAEPPAK Unmodified 1238.6255 0.62551466 2639 B4E0B8;Q8TDN6;Q9NUW4;A0JLQ5 BRIX1;BXDC2 Ribosome biogenesis protein BRX1 homolog yes no 0 0 1 3.5 0.5 1 1 37.12 37.169 3 6.229E-05 8421 20230619_1882_Aki_TMTPro18x_K_F3 130.1 108.63 284340 206440 277870 303930 382790 368520 334080 361110 397030 321230 355740 328220 389410 326990 347340 334680 450380 362030 262690 189860 284470 299660 387660 367580 341640 368230 399150 327170 368210 333010 394470 337830 359490 337820 429320 343890 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 453060000 23162 2639 21720 43551;43552 35027;35028;35029 35028 3 9606 Homo sapiens 0.015746926954761875 RNELVIR Unmodified 898.53485 0.53484916 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 1 5.5 2.69 1 1 1 1 33.407 33.437 3 0.0046515 7340 20230619_1880_Aki_TMTPro18x_K_F1 112.94 23.643 259550 204330 242730 236790 339330 342290 310650 321040 392150 340540 392960 437290 395040 348090 409780 418310 458200 437450 239820 187380 249370 237920 343950 337720 317370 329830 394790 346130 403600 436460 403970 365600 419130 420310 437790 415370 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 521340000 23163 1464 21721 43553;43554;43555;43556 35030;35031;35032 35030 3 9606 Homo sapiens 0.08152313228515595 RNENQLIIFADDTYPR Unmodified 1963.9752 0.97518882 3931 Q15393;A8K6V3;B3KQH1;B3KM77;Q15393-3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 1 5.5 0.5 1 1 53.735 53.808 3 1.2376E-11 15378 20230619_1885_Aki_TMTPro18x_K_F5 165.9 161.79 862450 815730 846690 796790 828460 802850 888720 845060 735960 1111600 1036800 1130700 1043300 946180 1008700 986970 1049600 1042900 798140 746470 860660 807160 862180 813300 888420 867630 772240 1108700 1050800 1139700 1063100 984090 1028400 994560 1003800 990020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 585800000 23164 3931 21722 43557;43558 35033;35034;35035 35033 3 9606 Homo sapiens 0.031760231243652015 RNEPNSYAISFR Unmodified 1452.711 0.71097563 3477 P19174;P19174-2;Q4LE43;B4DMA3 PLCG1;PLCG1 variant protein 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1;Phosphoinositide phospholipase C yes no 0 0 1 1.5 0.5 1 1 40.695 40.732 3 0.0053739 10427 20230619_1880_Aki_TMTPro18x_K_F1 63.727 46.14 51350 38878 57417 50661 67992 69440 64713 82901 72568 59600 68818 80530 73256 66392 68544 62687 98130 83695 47506 35701 57935 50474 69641 69092 65734 83056 73304 62099 71064 80289 74467 68755 71370 64255 93504 79324 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75832000 23165 3477 21723 43559;43560 35036 35036 1 9606 Homo sapiens 0.0027285788110020803 RNEVLDR Unmodified 900.47773 0.47772821 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A994J6W6;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 3 0.816 1 1 1 27.79 27.88 3 0.0021908 4762 20230619_1882_Aki_TMTPro18x_K_F3 131.06 42.12 103770 66453 98205 101160 131670 133670 118850 119600 156690 101530 126290 114690 114170 98383 120150 90621 137120 118170 95784 61176 100730 99683 133760 132360 121710 122650 156070 104100 130400 115300 117230 101650 122830 92841 130900 112020 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 116100000 23166 1022;3868 21724 43561;43562;43563 35037;35038;35039;35040;35041 35040 5 9606 Homo sapiens 0.02350845952128111 RNFAELK Unmodified 876.48175 0.48175096 3473 P18124;A0A024R814 RPL7 60S ribosomal protein L7 yes no 0 0 1 1.5 0.5 1 1 40.84 40.877 3 0.0052948 10503 20230619_1880_Aki_TMTPro18x_K_F1 110.31 35.12 617870 425510 582730 404410 670540 933270 775240 662790 943970 243250 220420 243370 256610 196840 365210 265580 275320 213700 570490 389780 595520 417500 694170 896860 779820 684390 920960 269970 262290 245830 266080 208230 363910 263230 263870 203750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 416680000 23167 3473 21725 43564;43565 35042;35043 35042 2 9606 Homo sapiens 0.038569354458559246 RNFILDQCNVYNSGQR Unmodified 1982.9381 0.93809181 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 1 3.5 0.5 1 1 45.837 45.897 3 2.3403E-64 12244 20230619_1882_Aki_TMTPro18x_K_F3 273.88 251.03 190950 143700 185760 214390 185470 220830 226830 252350 275030 236530 231780 269380 268950 278340 218230 316750 306280 294360 176440 132160 189350 210720 193970 223390 227830 255140 275670 240960 241690 272330 271380 288560 228200 316170 292110 279860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 426210000 23168 3957 21726 43566;43567 35044 35044 1 9606 Homo sapiens -0.014059716930432842 RNFILDQTNVSAAAQR Unmodified 1802.9387 0.93874373 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 1 3.5 1.12 1 1 1 1 45.413 45.482 3 3.2291000000000004E-77 12015 20230619_1882_Aki_TMTPro18x_K_F3 341.5 315.39 1468600 1026700 1140400 1367700 1235500 1441600 1292800 1468800 1582100 1533500 1345800 1332100 1653400 1374700 1136200 1904700 1744200 1680500 1354200 943290 1188600 1353800 1279300 1452300 1309500 1499800 1586900 1540400 1404700 1363900 1653800 1444800 1202200 1890500 1662500 1598700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7478099999.999999 23169 3776 21727 43568;43569;43570;43571 35045;35046 35046 2 9606 Homo sapiens 0.06939191018341262 RNFQEEQINTR Unmodified 1433.7011 0.70113922 1712 Q8IXB1;Q8IXB1-2;A0A7P0TAQ9;A0A7P0Z431;B3KNK5;B4DP04;A0A7P0TB97;Q8N4C5 DNAJC10 DnaJ homolog subfamily C member 10 yes no 0 0 1 4.5 0.5 1 1 33.26 33.329 3 2.2017E-06 6850 20230619_1883_Aki_TMTPro18x_K_F4 138.94 103.2 56452 36810 44427 54788 53994 61256 52006 60751 75529 63158 73723 83953 82557 75978 57633 96273 97635 91775 52041 33874 46335 53906 55364 61412 53292 62146 75505 64362 76138 84044 82882 79655 61462 96049 92989 87237 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82116000 23170 1712 21728 43572;43573 35047;35048 35047 2 9606 Homo sapiens 0.0016366987576930114 RNFSSVAASSGNTTLNGEDGVEQTAIK Unmodified 2752.3264 0.32637912 52 A0A024QZN6;Q9ULJ6-3;Q9ULJ6;D4YW76 RAI17;ZMIZ1;TRAFIP10 Zinc finger MIZ domain-containing protein 1 yes no 0 0 1 6 0 1 48.182 48.261 4 4.5969E-14 13147 20230619_1886_Aki_TMTPro18x_K_F6 138.92 109.53 35847 25109 30711 32619 34972 35820 33615 36273 45244 39891 42574 40845 47179 42880 40437 47414 53135 49687 33078 23063 31693 32367 35964 35994 34339 37112 45321 40170 43989 41512 47719 44398 41974 47682 50693 47182 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34746000 23171 52 21729 43574 35049 35049 1 9606 Homo sapiens 0.02030898060729669 RNIPPYFVALVPQEEELDDQK Unmodified 2499.2646 0.26455413 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 0 0 1 5.22 1.31 1 2 2 2 2 61.616 61.652 3;4 1.0856E-07 18624 20230619_1885_Aki_TMTPro18x_K_F5 97.776 87.854 157300 110620 117690 138420 119550 141860 126330 153170 155600 174470 172460 171020 177460 160910 145590 214290 191630 188400 145020 101570 122990 137550 124440 143420 127990 156170 157650 175030 176320 173520 179560 169060 151530 212830 182880 179230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 943940000 23172 150 21730 43575;43576;43577;43578;43579;43580;43581;43582;43583 35050;35051 35050 2 9606 Homo sapiens 0.07489243170175541 RNLADCLR Unmodified 1016.5185 0.51854717 1203 B7Z478;A0A140VJS6;P49721;Q59FJ0 PSMB2 Proteasome subunit beta type-2;Proteasome subunit beta type yes no 0 0 1 1 0 1 35.748 35.748 3 0.013133 8281 20230619_1880_Aki_TMTPro18x_K_F1 65.305 41.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23173 1203 21731 43584 35052 35052 1 9606 Homo sapiens 0.010948640001060994 RNLDIERPTYTNLNR Unmodified 1873.9759 0.97585752 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;B4DDU2;F8VQQ4;F8VVB9;C9JDS9;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;P0DPH7-2;C9J2C0;Q9NY65-2;Q9NY65;Q6PEY2;Q7Z3M3;A0A7P0T945;A0A7P0TA31 TUBA1B;TUBA1A;TUBA4A;TUBA1C;TUBA2;TUBA8;TUBA3E;DKFZp686L04275 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain no no 0 0 2 1.5 0.5 1 1 39.633 39.668 4 2.5954E-25 9928 20230619_1880_Aki_TMTPro18x_K_F1 234.63 208.19 112170 80089 113750 131550 117740 195740 130400 127710 175330 172190 165970 206050 195150 166860 206400 171260 196930 277700 103650 73764 115670 129290 122920 191250 132120 136350 175760 172750 172330 206080 198770 173820 208980 178060 189070 262330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 410250000 23174 2408;3747;4144 21732 43585;43586 35053;35054 35053 2 9606 Homo sapiens 0.07382862564099923 RNLFAEIIEEHLANR Unmodified 1823.9642 0.9642302 4615 Q9NWY4 C4orf27 UPF0609 protein C4orf27 yes yes 0 0 1 2 0 1 59.847 59.86 4 3.5569E-05 18581 20230619_1881_Aki_TMTPro18x_K_F2 100.41 79.89 10147 9389.7 11104 13120 10203 10461 10267 10446 10922 9813.5 13086 14782 16830 14186 13379 16999 15492 19750 9397.4 8622.5 11196 12903 10661 10781 10377 10667 11173 10106 13499 14771 16893 14803 13803 17178 14831 18714 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102810000 23175 4615 21733 43587 35055 35055 1 9606 Homo sapiens 0.08520665540754635 RNLGSINTELQDVQR Unmodified 1741.9071 0.90710925 3304 O75396;A0A087X1A9 SEC22B Vesicle-trafficking protein SEC22b yes no 0 0 1 6.5 0.5 1 1 44.47 44.556 3 1.9252E-33 11136 20230619_1887_Aki_TMTPro18x_K_F7 257.16 212.05 200420 158560 186850 181280 200490 211660 201390 236540 225220 254470 256610 238400 253670 217700 248780 288840 262510 272620 185180 145390 191080 181720 207170 212350 203910 240220 229530 255610 261580 242200 258760 229000 254050 288090 251100 259070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295700000 23176 3304 21734 43588;43589 35056 35056 1 9606 Homo sapiens 0.06583198264343082 RNLMALAR Unmodified 943.53855 0.53855433 178 A0A024R1Z6;Q99536;Q99536-3;B3KUF8;Q99536-2;K7ESA3 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes no 0 0 1 7 0 1 39.513 39.578 3 0.0079453 9095 20230619_1887_Aki_TMTPro18x_K_F7 85.212 19.96 29357 24856 27421 27581 50631 85821 41279 43730 115270 21302 22083 25064 23975 20720 24582 18466 24159 26591 27137 22778 28410 28352 50912 81297 44329 46927 109210 23106 27116 25124 24489 21408 24928 19069 23136 25162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34018000 23177 178 21735 43590 35057 35057 1 9606 Homo sapiens 0.06452659730712185 RNLQQELETQNQK Unmodified 1627.8278 0.8277963 1675 H7BYN4;A0A7I2V5Y5;Q02241-2;Q02241;A0A2U3TZL8;Q02241-3 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 0 0 1 6 0 1 40.857 40.949 3 7.4944E-09 9924 20230619_1886_Aki_TMTPro18x_K_F6 153.15 119.96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23178 1675 21736 43591 35058 35058 1 9606 Homo sapiens 0.03899551310200877 RNNEELVVSASCK Unmodified 1504.7304 0.73039044 3013 G3XAG1;Q96ME7-3;Q96ME7;B4DES6;B7Z9P6;Q96ME7-2;Q658M0 ZNF512;DKFZp666L156 Zinc finger protein 512 yes no 0 0 1 6 0 1 39.932 40.02 3 6.5519E-05 9530 20230619_1886_Aki_TMTPro18x_K_F6 108.23 89.157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23179 3013 21737 43592 35059 35059 1 9606 Homo sapiens -0.0017855389025953627 RNNEETVMSAR Unmodified 1305.6095 0.60954702 23 B7Z4B1;A0A024QZ33;B7ZL27;B2R9Y2;Q9H0G5 CCDC55;NSRP1 Nuclear speckle splicing regulatory protein 1 yes no 0 0 1 4 0 1 29.112 29.182 3 0.004974 5300 20230619_1883_Aki_TMTPro18x_K_F4 88.338 65.22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23180 23 21738 43593 35060 35060 1 9606 Homo sapiens -0.031033368130692907 RNNSLQTATENTQAR Unmodified 1702.8347 0.83467259 4059 Q5T1M5;A0A8I5KX71;B4DVS2;B4DZS8 FKBP15 FK506-binding protein 15;Peptidyl-prolyl cis-trans isomerase yes no 0 0 1 6.67 0.471 1 2 26.838 26.918 3 4.6564E-14 5524 20230619_1886_Aki_TMTPro18x_K_F6 180.81 156.97 5646.5 4848.6 7723.8 6541.8 10354 8762.5 8489.3 7903.8 13995 7965.9 10079 12053 11092 9084.9 9574 11693 11766 12416 5231.9 4451.8 7702.4 6469.6 10480 8678.4 8721.9 8137.5 13770 8097.7 10477 11949 11218 9605.9 9895 11742 11216 11783 2 2 3 2 3 3 2 3 3 2 2 3 3 3 3 3 2 3 43875000 23181 4059 21739 43594;43595;43596 35061;35062;35063 35061 3 9606 Homo sapiens 0.01136864190812048 RNPALYASNVR Unmodified 1259.6735 0.67346791 4253 Q8NF37;D3DTC2;A0A0G2JQ62 LPCAT1;AYTL2 Lysophosphatidylcholine acyltransferase 1 yes no 0 0 1 4.5 0.5 1 1 34.371 34.458 3 0.00076531 7324 20230619_1883_Aki_TMTPro18x_K_F4 98.182 66.148 58661 48973 55549 50198 62705 78212 72005 69872 124320 29485 38234 29946 35907 32135 42204 29077 35129 31515 54225 44851 56785 50998 64996 76750 73576 70860 119900 32195 43119 30522 37067 32913 42340 29455 33654 29921 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21341000 23182 4253 21740 43597;43598 35064;35065 35064 2 9606 Homo sapiens 0.054018114061591405 RNPDELAEALDER Unmodified 1526.7325 0.73249893 451 A8K2I7;A0A024R7I0;O14908;K7EM11;A0A024R7I1;O14908-2 GIPC1 PDZ domain-containing protein GIPC1 yes no 0 0 1 1.5 0.5 1 1 45.22 45.261 3 9.1126E-08 12424 20230619_1880_Aki_TMTPro18x_K_F1 150.37 124.25 47273 33538 45637 51612 45914 57742 45397 56735 63912 67811 67424 77321 75704 68337 52945 84824 85742 91536 43663 30864 46538 50690 47751 57858 46418 58293 64244 68220 69404 77745 75983 71647 56226 85248 81760 86849 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147630000 23183 451 21741 43599;43600 35066 35066 1 9606 Homo sapiens -0.009798018808396591 RNPDTQWITK Unmodified 1257.6466 0.64658446 210 A0A024R2Q4;P61313;A0A2R8YEM3;E7EQV9;E7ENU7 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 0 0 1 1.5 0.5 1 1 43.271 43.312 3 6.3348E-05 11336 20230619_1881_Aki_TMTPro18x_K_F2 122.33 84.305 647640 508310 621020 665660 639470 789660 715360 755130 893210 744080 697780 818290 1033700 801320 644810 1199600 1162100 1174200 598500 466730 633750 660860 665770 787950 722370 773370 892180 755260 740220 827450 1026100 848530 694110 1195800 1107000 1115500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 893130000 23184 210 21742 43601;43602 35067 35067 1 9606 Homo sapiens 0.02806702794987359 RNPDTQWITKPVHK Unmodified 1718.9216 0.92163711 210 A0A024R2Q4;P61313;A0A2R8YEM3;E7EQV9;E7ENU7 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 0 0 2 4 0 1 41.729 41.772 5 1.471E-08 10280 20230619_1883_Aki_TMTPro18x_K_F4 158.65 110.9 384640 359310 391490 382560 416800 415950 469580 439970 386390 431420 391820 326160 418850 290340 380330 329130 333230 243610 356030 329050 397440 385150 431650 418900 467860 447570 398950 433050 402590 334720 424210 303000 384500 325610 318670 232610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1419200000 23185 210 21743 43603 35068;35069 35068 2 9606 Homo sapiens 0.09093315203131169 RNPEMLK Unmodified 886.46947 0.46947171 3131 Q9Y3E5;J3KQ48 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes no 0 0 1 8 0 1 36.241 36.228 3 0.0022032 7959 20230619_1888_Aki_TMTPro18x_K_F8 123.69 90.332 195420 166550 204630 191630 266740 304530 250350 250300 375360 107830 112000 91209 106710 82053 169180 79591 121210 89677 180820 152680 207990 192970 271990 298060 256980 255560 363950 116700 127050 93182 112080 84894 167770 80888 116220 85185 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44066000 23186 3131 21744 43604 35070;35071 35070 2 9606 Homo sapiens 0.021695757111501734 RNPETSVTQSSSAQDEPATK Unmodified 2131.9982 0.99816868 2672 B7WP74;Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog yes no 0 0 1 3 0 1 35.455 35.512 3 2.8461E-11 7788 20230619_1882_Aki_TMTPro18x_K_F3 130.56 102.71 11124 8925.4 11710 10033 11476 13531 9893.7 9447.9 13947 11044 13362 14958 13228 12196 10722 14955 17740 16282 10290 8182.1 11831 10090 11910 13325 10198 9980.3 13946 11206 13737 14914 13401 12812 11357 15045 16895 15456 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29414000 23187 2672 21745 43605 35072 35072 1 9606 Homo sapiens -0.022550473394403525 RNPHEVQPAYATR Unmodified 1537.775 0.77497287 4488 Q9GZT9;Q9GZT9-2;R4SCQ0;R4SCP5;Q9NTU9;A0A590UJK7;A0A590UJT7;A0A590UJ78;A6XP74;Q9GZT9-3;R4SCF3;R4SCC4;R4RYY7;R4RYZ7;R4RZ18;R4S1C5;I6QYW0 EGLN1 Egl nine homolog 1 yes no 0 0 1 8 0 1 27.04 27.074 3 0.023014 4642 20230619_1888_Aki_TMTPro18x_K_F8 58.752 36.554 1930.3 804.34 885.01 1182.9 1957.5 2388.7 0 1360.6 1512.8 2161.8 2628.1 1875.5 1522.1 882.12 1149.1 1475.1 2498.6 1560.5 1771.4 742.06 1002.3 1177.3 1905.2 2299.2 0 1477.1 1503 2131.8 2587.8 1884 1568.8 976.4 1251 1476.4 2371.1 1484.7 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1566400 23188 4488 21746 43606 35073 35073 1 9606 Homo sapiens 0.027596380380828123 RNPNVNLTDK Unmodified 1169.6153 0.61528433 1314 A0A8I5KTG3;A0A8I5KTL1;A0A8I5KT58;A0A8I5KX08;A0A8I5KZ42;A0A8I5QL22;A0A1W2PPB7;A0A8I5QJC0;E9PH70;A0A8I5KPM9;B4DK94;A0A8I5KQK7;H7C584;Q9ULH0-3;Q9ULH0-2;Q9ULH0-4;Q9ULH0 KIDINS220 Kinase D-interacting substrate of 220 kDa yes no 0 0 1 8 0 1 37.181 37.166 3 0.00026026 8358 20230619_1888_Aki_TMTPro18x_K_F8 117.14 82.757 48965 32679 48440 48143 52868 54140 56937 61287 76125 57615 57166 65018 67228 57665 53632 77471 73774 57353 45220 30066 49313 47429 54670 54444 57759 61997 75670 58678 60023 65439 67687 60727 56013 76345 70278 54748 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33952000 23189 1314 21747 43607 35074 35074 1 9606 Homo sapiens 0.037261297608893074 RNPQQDYELVQR Unmodified 1544.7696 0.76955314 1728 B2R928;A0A804HIS2;Q9Y4K4;D3DSB5;G3V4T8;G3V4Q4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 5 yes no 0 0 1 5 0 1 36.702 36.794 3 2.4906E-05 8213 20230619_1885_Aki_TMTPro18x_K_F5 110.58 83.612 24444 20774 22882 25603 31012 31024 26768 27983 36047 31075 31001 33344 37821 32258 34894 36608 34460 32551 22596 19056 23508 25527 31450 30900 27519 28875 36002 31327 32361 33710 38246 33532 35518 36492 32962 30967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92271000 23190 1728 21748 43608 35075 35075 1 9606 Homo sapiens 0.018959144555765306 RNPSSSTLPGGGVQNPSADR Unmodified 1995.9722 0.97222871 4672 Q9UJY4 GGA2 ADP-ribosylation factor-binding protein GGA2 yes yes 0 0 1 7.5 0.5 1 1 34.649 34.683 3 1.1376E-16 7337 20230619_1888_Aki_TMTPro18x_K_F8 166.21 156.43 14928 13939 15205 12716 9988.5 10711 12821 12753 12996 19611 19196 18009 22011 16572 16652 21761 20278 20075 13818 12749 15327 12938 10858 11046 12785 13071 13506 19388 19514 18311 22105 17427 17255 21675 19365 19086 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 119510000 23191 4672 21749 43609;43610 35076;35077 35077 2 9606 Homo sapiens 0.014081479995866175 RNQDLAPNSAEQASILSLVTK Unmodified 2254.1917 0.19172353 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63;X6R6Z1;A0A0A0MRL0 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 1 1.5 0.5 1 1 59.55 59.556 3 3.1539E-37 18417 20230619_1881_Aki_TMTPro18x_K_F2 235.5 211.49 288160 232160 271560 284900 269100 310540 294810 303500 307300 353560 347960 344620 376490 319920 344960 391400 350190 382870 266300 213000 277300 283750 280520 311900 296290 311840 314270 354280 356350 349480 381800 334610 351900 391570 335230 363620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 687280000 23192 2621 21750 43611;43612 35078;35079 35079 2 9606 Homo sapiens 0.11479534167438032 RNQDRPSLLK Unmodified 1225.6891 0.68911797 2046 Q5SZE3;H0YKH6;Q5SZE4;Q5SZE1;H0YNU7;A8K4M4;Q96G23 CERS2 Ceramide synthase 2 yes no 0 0 2 4 0 1 34.238 34.288 4 0.0050107 7260 20230619_1883_Aki_TMTPro18x_K_F4 78.548 23.096 47352 27964 36533 46236 47226 59171 65562 56896 74851 54395 47927 56691 64528 50647 50894 70237 64030 59326 43626 25781 38262 45320 48782 58745 65246 58227 74611 55224 51224 57249 64685 53479 52821 69599 61104 56481 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33521000 23193 2046 21751 43613 35080 35080 1 9606 Homo sapiens 0.08530097923221547 RNQEVVLR Unmodified 1012.5778 0.57777661 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;A0A024R0V9;H0YHT2;H0YIM6 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 0 1 6.5 1.12 1 1 1 1 29.947 30.004 3 0.00019061 5801 20230619_1886_Aki_TMTPro18x_K_F6 149.94 69.698 146460 116230 121120 145220 153430 159540 133150 129470 160050 132280 160890 150910 147940 136350 140380 139160 175200 156540 135210 106670 125740 144400 156300 159590 136270 134480 161470 134190 164390 151900 151140 141250 144780 140790 167160 148560 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 228390000 23194 4170 21752 43614;43615;43616;43617 35081;35082;35083;35084 35082 4 9606 Homo sapiens 0.07199083285956931 RNQKPEVR Unmodified 1025.573 0.57302558 1864 C9JXB8;A0A994J4A5;C9JNW5;V9HW01;P83731 RPL24;HEL-S-310 60S ribosomal protein L24 yes no 0 0 2 2 0 1 23.104 23.175 4 0.02913 3851 20230619_1881_Aki_TMTPro18x_K_F2 69.825 50.038 59768 31959 76455 84729 120670 99245 75071 109670 83663 57022 107710 100310 73429 68289 81959 26870 91183 86679 55274 29718 76930 81321 120320 99458 78736 109820 85562 61735 107830 98750 76453 69342 83385 31207 87123 81711 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 286840000 23195 1864 21753 43618 35085 35085 1 9606 Homo sapiens 0.061261991431820206 RNQSFCPTVNLDK Unmodified 1577.762 0.76202492 3592 Q6NZ52;P46776;E9PJD9;Q9BQQ5;E9PLL6 RPL27A;L27a 60S ribosomal protein L27a yes no 0 0 1 2 0 1 44.857 44.939 3 3.277E-08 12094 20230619_1881_Aki_TMTPro18x_K_F2 162.94 125.79 1042700 796560 850250 868960 848890 975480 1015600 1019800 1026000 1066600 525120 609390 1372400 790370 555130 1401600 1259800 1126300 962330 730170 879910 873520 886930 979500 1014400 1039500 1027100 1061600 599310 646260 1333500 843540 622290 1380400 1197700 1073200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4868500000 23196 3592 21754 43619 35086 35086 1 9606 Homo sapiens -0.003745611363228818 RNQVSYVRPAEPAFLAR Unmodified 1973.0595 0.05952757 4324 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 yes yes 0 0 2 5.5 0.5 1 1 42.64 42.729 4 2.0215E-13 10688 20230619_1885_Aki_TMTPro18x_K_F5 159.44 138.19 77747 57131 75477 74811 73293 81373 78954 78708 92440 77716 84359 65262 75351 64625 75978 81125 73738 77361 71828 52471 76821 74189 76479 81717 79714 80562 93031 78254 86414 66889 77219 67565 77158 81034 70599 73505 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84190000 23197 4324 21755 43620;43621 35087;35088 35087 2 9606 Homo sapiens 0.1119201873179918 RNREEEWDPEYTPK Unmodified 1847.8438 0.84384029 1525 A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 0 0 2 3 0.816 1 1 1 40.328 40.385 4 1.7347E-06 9723 20230619_1882_Aki_TMTPro18x_K_F3 125.53 84.978 33198 26731 32925 32135 37354 37211 36045 40601 45322 41340 41430 43539 44964 34703 45334 41861 46325 42063 30692 24520 33525 32091 38396 37332 36719 41241 45497 41803 42867 43790 45773 36483 46124 41978 44284 39965 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 378420000 23198 1525 21756 43622;43623;43624 35089 35089 1 9606 Homo sapiens -0.046167872435262325 RNSSDSAIDNPK Unmodified 1302.6164 0.61640654 1951 P46100;P46100-4;P46100-3;P46100-5;P46100-2;A4LAA3;P46100-6;A0A096LNL9;A0A096LNW1 ATRX Transcriptional regulator ATRX yes no 0 0 1 4 0 1 32.554 32.611 3 0.032388 6568 20230619_1883_Aki_TMTPro18x_K_F4 48.568 23.715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23199 1951 21757 43625 35090 35090 1 9606 Homo sapiens -0.022797006608470838 RNSSEASSGDFLDLK Unmodified 1624.7693 0.76927837 4675;4676 Q9UK76;J3KT51;Q9UK76-2;Q9UK76-3;J3KSH8 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed no no 0 0 1 5 0 1 48.61 48.687 3 0.010683 13174 20230619_1885_Aki_TMTPro18x_K_F5 65.47 28.314 98644 78410 90675 111040 121150 125260 136830 135350 166130 134850 136680 162760 169390 128020 107260 179690 192410 206820 91136 72054 93375 109600 123830 125790 137880 137560 166360 137190 143150 162780 168900 136040 115260 181000 183380 196100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42297000 23200 4675;4676 21758 43626 35091 35091 1 9606 Homo sapiens -0.018115500549129138 RNSTIPTK Unmodified 915.51378 0.51377937 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNX1;B4E1T6 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B no no 0 0 1 2.5 0.5 1 1 33.15 33.215 3 0.0077787 6959 20230619_1881_Aki_TMTPro18x_K_F2 76.345 27.551 75794 49349 117870 125380 196190 192780 140070 173150 160530 105450 161830 176520 142100 144150 143180 66570 182040 160900 70317 45802 117430 121070 195800 189240 145200 176320 162230 112430 165220 174720 145890 145650 147270 73709 173650 151900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 151840000 23201 1031 21759 43627;43628 35092;35093 35092 2 9606 Homo sapiens 0.05264303129001746 RNTDVPESQQNFHRPVK Unmodified 2051.0297 0.029684005 4297 Q92576-2;Q92576;E7EVH3;B0AZS7;D6R9X2;E9PE34;A0A1B0GX99;B3KP41;A8K376 PHF3 PHD finger protein 3 yes no 0 0 2 8 0 1 33.147 33.147 5 3.7293E-18 6752 20230619_1888_Aki_TMTPro18x_K_F8 179.46 146.75 16314 16010 21306 21228 23818 23442 19041 18652 20947 22952 26968 23903 23470 23165 20590 18823 27689 24471 15142 14691 21258 21033 24379 23435 19552 19507 21482 22998 27207 24193 23952 23686 21368 19312 26402 23195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31780000 23202 4297 21760 43629 35094 35094 1 9606 Homo sapiens 0.046210349957618746 RNTLEWCLPVIDAK Unmodified 1713.8872 0.88722543 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 1 2 0 1 59.595 59.607 3 0.00062944 18487 20230619_1881_Aki_TMTPro18x_K_F2 88.73 67.873 59336 49343 54997 57536 49921 57701 59914 64719 67694 66979 61620 59545 68664 60717 62061 80506 79394 74208 54838 45243 56171 57459 52559 58498 60093 65673 68305 67342 63807 60870 69585 63630 64280 80172 75760 70569 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102930000 23203 2181 21761 43630 35095 35095 1 9606 Homo sapiens 0.05883731000017178 RNTNSVPETAPAAIPETK Unmodified 1894.9749 0.97485447 1718 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;A0A3B3ISX1;A0A3B3ITG9;A0A7P0TA14 ADAR Double-stranded RNA-specific adenosine deaminase yes no 0 0 1 6 0 1 41.743 41.837 3 2.5785E-09 10276 20230619_1886_Aki_TMTPro18x_K_F6 123.55 105.85 55571 46000 52665 54974 55485 68008 67342 61286 75242 81004 70947 88734 82799 65742 83149 91262 84657 92380 51367 42189 53815 54954 57788 67616 67433 63608 76100 81027 73658 88881 84120 69940 84676 91334 81038 87702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208090000 23204 1718 21762 43631 35096 35096 1 9606 Homo sapiens 0.0631660340450253 RNTNSVPETAPAAIPETR Unmodified 1922.981 0.98100248 4020 Q59EC0;B7Z8Y3 yes no 0 0 1 5.5 0.5 1 1 37.986 38.07 3 1.5617E-19 8729 20230619_1886_Aki_TMTPro18x_K_F6 192.25 172.52 70011 56883 63549 62737 72345 92842 81064 75250 86081 82919 88526 93667 99789 78412 79379 100380 87125 98590 64685 52135 65246 63283 74795 91171 81368 78288 87517 83734 91227 94095 100470 82568 81626 100360 83365 93618 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 421890000 23205 4020 21763 43632;43633 35097;35098 35098 2 9606 Homo sapiens 0.056431216360351755 RNTTIPTK Unmodified 929.52943 0.52942943 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;P11142-2;B4E1Q1;A8K7Q2;Q96BE0;E9PS65;P54652;A0A024R6B5;A0A384MDT7;B3KUS2 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 0 0 1 3 0.816 1 1 1 34.222 34.278 3 0.0083592 7216 20230619_1883_Aki_TMTPro18x_K_F4 83.309 60.237 96289 47421 113280 133500 170080 215200 125200 170970 196180 112760 172500 214730 146590 159540 137730 95540 226910 218070 88944 44176 114660 128560 171280 210090 131110 176030 194550 120340 177210 211260 150360 162960 144870 104050 216180 205860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1129000000 23206 3430 21764 43634;43635;43636 35099;35100 35100 2 9606 Homo sapiens 0.061845896460340555 RNTYVCSER Unmodified 1183.5404 0.54040483 1646 P27448-7;P27448;A0A7I2V2N8;A0A7I2V639;A0A7I2V3I9;A0A7I2V5G3;A0A7I2V4K8;A0A7I2V549;A0A7I2V3B9;A0A7I2V4G7;A0A7I2V2I9;H0YJI9;H0YNV4;A0A7I2V3K2;P27448-2;J3KNR0;P27448-4;A0A7I2V2U9;P27448-3;P27448-6;A0A7I2V602;A0A7I2V409;A0A7I2YQF4;H0YKP9;A0A7I2V2E3;A0A7I2V4T2;A0A7I2V3P5;A0A7I2V3C6;A0A7I2YQF7;A2SY06;Q86U11;B4DKN1;P27448-8;H0YIY6 MARK3 MAP/microtubule affinity-regulating kinase 3 yes no 0 0 1 6 0 1 27.183 27.217 3 0.0055116 4833 20230619_1886_Aki_TMTPro18x_K_F6 72.79 54.01 6224.6 3293.1 6270 6139.4 5786.7 8189.8 5514.6 5613.6 6668.3 4566.3 4888.2 4957.2 5418 3088.9 4963.9 6249.3 6878.4 5049.4 5743.4 3043 6358.4 5986.6 6058 8056.8 5614.6 5885.7 6651.9 4687.6 5122.9 4956.6 5484.7 3419.6 5167.5 6157.3 6550.1 4815.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1659300 23207 1646 21765 43637 35101 35101 1 9606 Homo sapiens -0.04402376042003198 RNVEGQDMLYQSLK Unmodified 1679.8301 0.83010449 1172;3819 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087X253;B4E261;Q96EL6;B4DIL5;Q10567-4;Q10567-3;Q10567-2;Q10567;B4DS79;B4DG47;Q7Z3M8;B4DKH5 AP2B1;DKFZp781K0743;AP1B1;DKFZp686A01208 AP-2 complex subunit beta;AP complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 1 7.5 0.5 1 1 48.993 49.069 3 1.4436E-11 13128 20230619_1888_Aki_TMTPro18x_K_F8 172.85 113.55 324530 251410 278800 318990 234680 291350 296650 308390 359440 372710 341560 331660 424130 341330 304190 450730 411770 411600 299630 230780 286620 316220 249380 297040 297540 315600 362130 372000 354700 339090 424530 357650 318180 448540 392940 391360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 667280000 23208 1172;3819 21766 43638;43639 35102;35103 35103 2 9606 Homo sapiens 0.017382637237005838 RNVESGEEELASK Unmodified 1446.6951 0.69505079 1871 A0A994J4Y8;Q96HS1-2;Q96HS1 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 0 0 1 2.5 0.5 1 1 39.378 39.439 3 8.9754E-11 9547 20230619_1881_Aki_TMTPro18x_K_F2 173.06 120.03 298690 191570 232970 301810 251400 290770 278820 305920 436440 403790 414280 447410 488730 394980 247900 545110 523120 451070 275310 176430 242830 295380 260990 295060 284400 314060 434810 404270 429130 450570 485160 417000 273120 539200 497360 429690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 379390000 23209 1871 21767 43640;43641 35104 35104 1 9606 Homo sapiens -0.010428931464275593 RNVIEAVYNR Unmodified 1232.6626 0.66256887 389 B5BUD5;B2R8E4;A0A024R6A5;P35813;P35813-3 PPM1A Protein phosphatase 1A yes no 0 0 1 3 0 1 42.095 42.157 3 0.0015834 10530 20230619_1882_Aki_TMTPro18x_K_F3 90.685 67.08 86182 72069 69476 86030 87521 107400 89121 100390 122820 78116 93754 100410 102470 89240 84536 106920 116610 126690 79573 66095 72354 85996 89714 106780 90791 102410 121900 80909 97961 100600 103520 93366 88173 108190 111340 120080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55161000 23210 389 21768 43642 35105 35105 1 9606 Homo sapiens 0.05554409031879004 RNVIFQPVAELK Unmodified 1412.814 0.81398414 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;Q8WTZ9;O14943;Q49A78;B1APP8;H0Y757 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 1 3.5 0.5 1 1 52.766 52.808 3 5.5017E-06 15384 20230619_1882_Aki_TMTPro18x_K_F3 141.13 99.587 525730 449440 483240 551310 477600 539450 552440 562080 624070 675950 614110 658190 705980 593830 573720 817420 739920 780110 485940 412260 494780 548260 498780 546940 554980 575710 631840 676360 634780 666890 711480 626520 596270 814960 706620 741200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 234520000 23211 1831 21769 43643;43644 35106 35106 1 9606 Homo sapiens 0.12408970339743064 RNVPQEESLEDSDVDADFK Unmodified 2191.9869 0.9869353 779 A0A024RDV7;O00505 KPNA3 Importin subunit alpha;Importin subunit alpha-4 yes no 0 0 1 1 0 1 48.896 48.896 3 1.7252E-06 13907 20230619_1880_Aki_TMTPro18x_K_F1 99.021 80.426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23212 779 21770 43645 35107 35107 1 9606 Homo sapiens -0.06137869433587184 RNVTVQPDDPISFMQLTAK Oxidation (M) 2175.0994 0.099403054 3646 P53618 COPB1 Coatomer subunit beta yes yes 0 1 1 1 0 1 54.357 54.357 3 9.9922E-10 16150 20230619_1880_Aki_TMTPro18x_K_F1 142.26 125.18 25518 22277 19896 30000 30693 23701 29318 29263 27048 30985 31924 30373 31222 27937 27193 37866 34091 34379 23563 20452 20892 29566 30911 24597 29567 29567 27904 31186 32483 30802 31711 29413 28163 37664 32554 32689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12191000 23213 3646 21771 43646 35108 35108 2332 1 9606 Homo sapiens 0.05885732829574408 RNVTVQPDDPISFMQLTAK Unmodified 2159.1045 0.10448843 3646 P53618 COPB1 Coatomer subunit beta yes yes 0 0 1 2 0 2 60.354 60.366 3;4 2.3591E-11 18737 20230619_1881_Aki_TMTPro18x_K_F2 144.42 131.93 60512 53551 62111 63805 56256 65812 68992 68791 70062 72690 71095 65337 74637 68517 71210 89008 76906 82798 55994 49101 62892 63639 59247 66464 68877 70172 71381 73029 73025 66835 75941 71635 72888 88713 73569 78686 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 239940000 23214 3646 21771 43647;43648 35109;35110 35109 2 9606 Homo sapiens 0.07130036692160502 RPAEDDVPR Unmodified 1053.5203 0.52032131 1458 D6RD44;A0A384NKK0;Q96EI5;Q96EI5-2;A2RQR6 TCEAL4 Transcription elongation factor A protein-like 4 yes no 0 0 1 2 0 1 29.396 29.468 3 0.0044003 5517 20230619_1881_Aki_TMTPro18x_K_F2 72.006 38.139 25068 12420 16691 20434 21965 21991 21500 19644 26884 17041 23189 27113 22599 23194 25719 19166 23519 22453 23058 11461 17750 19981 22399 22060 21860 20178 26896 17691 23975 26919 23257 23818 25939 19538 22517 21295 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8231800 23215 1458 21772 43649 35111 35111 1 9606 Homo sapiens -0.004298037102898888 RPAEDDVPRK Unmodified 1181.6153 0.61528433 1458 D6RD44;A0A384NKK0;Q96EI5;Q96EI5-2;A2RQR6 TCEAL4 Transcription elongation factor A protein-like 4 yes no 0 0 2 4.5 0.5 1 1 32.179 32.249 4 0.026949 6438 20230619_1883_Aki_TMTPro18x_K_F4 65.179 49.64 50222 33751 47058 51937 59507 62535 59178 61505 72037 58318 73366 71260 62384 64496 66194 51172 89843 72827 46363 31068 48282 51070 60815 62388 60084 62810 72642 59531 74723 71506 64304 66023 68454 52910 85615 69005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54659000 23216 1458 21773 43650;43651 35112 35112 1 9606 Homo sapiens 0.031741297608732566 RPAEDMEEEQAFK Oxidation (M) 1594.6933 0.69333623 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;A0A994J795;S4R457 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 1 1 1.8 0.748 2 2 1 39.257 39.295 3;4 0.0018762 9448 20230619_1881_Aki_TMTPro18x_K_F2 100.31 69.87 1154800 854640 985150 1208900 1355100 1397400 1291100 1272900 1500800 1408000 1703600 1626700 1717700 1398400 1349000 1946800 1661800 1828100 1065900 785580 1021700 1193500 1376500 1395800 1311800 1312700 1524800 1422600 1737900 1635300 1734800 1478900 1398900 1939000 1588200 1737000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3705199999.9999995 23217 1865 21774 43652;43653;43654;43655;43656 35113;35114 35114 1199 2 9606 Homo sapiens -0.08022270226706496 RPAEDMEEEQAFK Unmodified 1578.6984 0.69842161 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;A0A994J795;S4R457 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 1 3 1.41 1 1 1 1 1 43.194 43.249 3 3.2709E-08 11277 20230619_1881_Aki_TMTPro18x_K_F2 162.96 121.31 906520 674640 826330 860420 804150 1096500 959480 916270 1165300 1193400 1164100 1268300 1388800 1224000 1048700 1539500 1100200 1498300 837150 619410 846270 856590 843330 1086200 964730 955910 1176000 1193900 1204600 1282800 1394300 1280500 1078200 1538200 1054900 1422100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4160399999.9999995 23218 1865 21774 43657;43658;43659;43660;43661 35115;35116;35117 35115 3 9606 Homo sapiens -0.06777966364074928 RPAEDYVPR Unmodified 1101.5567 0.55670682 4032 Q969E4;Q5H9L2 TCEAL3;TCEAL5 Transcription elongation factor A protein-like 3;Transcription elongation factor A protein-like 5 yes no 0 0 1 4.5 0.5 1 1 34.385 34.454 3 0.00098549 7312 20230619_1885_Aki_TMTPro18x_K_F5 93.058 58.526 37398 32148 32492 40790 43277 38510 47380 48213 52642 45749 59239 54732 56748 43511 45898 50875 57777 52913 34555 29498 33623 40454 44146 39359 47689 48521 53549 46633 60313 54804 57451 45660 47543 51110 55132 50253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73323000 23219 4032 21775 43662;43663 35118 35118 1 9606 Homo sapiens 0.009990731864036206 RPAEGPPTNPPAPGGGSSSSK Unmodified 1946.9446 0.94461697 864 A0A087WZ13;E9PAU2 RAVER1 yes no 0 0 1 7 0 1 35.509 35.58 3 2.1709E-05 7493 20230619_1887_Aki_TMTPro18x_K_F7 92.034 78.442 12057 10498 9962.7 11380 14224 14067 11858 14702 17419 16117 16060 18855 18148 17043 15201 15765 20994 19999 11137 9617.4 10364 11459 14377 14043 12269 15002 17382 16298 16648 18940 18333 17571 15830 16100 20024 18954 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29360000 23220 864 21776 43664 35119 35119 1 9606 Homo sapiens 0.009022447393135735 RPAETNLR Unmodified 955.51993 0.51992738 1369 A8YXX4;A0A2R8YDT1;P15104;A1L199;Q2TU80 PIG59;GLUL;PIG43 Glutamine synthetase yes no 0 0 1 5.5 0.5 1 1 27.381 27.434 3 0.0024722 4882 20230619_1886_Aki_TMTPro18x_K_F6 96.668 49.094 34282 21003 38039 35134 49802 53026 53431 51461 56782 45697 58411 57440 50982 40063 45629 21323 43784 34914 31679 19363 38498 34543 50862 52201 53751 52512 57663 46853 59515 57124 51972 40934 46249 22588 41849 33050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46065000 23221 1369 21777 43665;43666 35120;35121 35121 2 9606 Homo sapiens 0.040388213604956036 RPANQFVPR Unmodified 1083.5938 0.59376103 3202 P67870;Q5SRQ6;N0E4C7;A0A1U9X7J2;A0A7I2YQ78 CSNK2B Casein kinase II subunit beta yes no 0 0 1 4 0.816 1 1 1 33.222 33.293 3 0.00014373 6839 20230619_1885_Aki_TMTPro18x_K_F5 135.79 99.097 193080 159560 177570 192380 211750 233500 202370 212130 251510 201290 219020 207420 229490 184880 216300 230210 240470 203230 178420 146350 182270 192120 217110 232510 206120 217850 252030 204310 226630 209650 233230 193850 221570 229090 229590 193450 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 348320000 23222 3202 21778 43667;43668;43669 35122;35123;35124 35124 3 9606 Homo sapiens 0.05530789522822488 RPAPARPTMPPPQVSGSR Oxidation (M) 1917.0003 0.0002981316 1385 A0A2X0SFX7;Q9Y3L3 SH3BP1 SH3 domain-binding protein 1 yes no 0 1 2 8 0 1 29.521 29.542 4 0.022131 5465 20230619_1888_Aki_TMTPro18x_K_F8 51.487 41.435 4620.4 2357.8 2798.5 4126.7 6504.3 5852 5223.8 4826.4 7726.4 4842.8 6082.8 5939.2 6562.4 6383.5 4596.9 6159.9 6645.2 6538.9 4248.4 2177.2 3057 4038.7 6427.5 5763.4 5411.4 5002.3 7655.3 4936.3 6334.7 5997.8 6597 6554.4 4830.5 6211.3 6337.5 6207.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4517100 23223 1385 21779 43670 35125 35125 867 1 9606 Homo sapiens 0.07847799445926285 RPAPQPASGANIPK Unmodified 1402.7681 0.76809658 2377 B3KPM6;O94830-2;O94830 DDHD2 Phospholipase DDHD2 yes no 0 0 1 3 0 1 36.834 36.888 3 2.6975E-05 8315 20230619_1882_Aki_TMTPro18x_K_F3 111.59 91.167 40032 32270 36950 44450 44611 46355 35643 36877 50396 44627 58113 56041 51193 47366 47025 56851 70023 63668 36990 29643 37939 43885 45507 46517 36934 38555 50783 45058 58930 56106 52320 49631 49212 57327 66731 60423 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29823000 23224 2377 21780 43671 35126 35126 1 9606 Homo sapiens 0.0828232515750642 RPAPQQIQQVQQQAVQNR Unmodified 2116.125 0.12498137 119 Q96GM5;A0A024R102;A0A024R137;Q96GM5-2;F8VUB0;B4DF50;F8VZ70;F8VW95 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 0 0 1 3.5 0.5 1 1 38.259 38.307 3 2.4801000000000003E-30 8926 20230619_1882_Aki_TMTPro18x_K_F3 228.73 216.94 10056 7180.3 7240.1 11190 8313.8 10927 7297.4 9207.5 13904 13319 11648 15890 14514 16963 7488.2 25066 23867 23562 9269.6 6608.7 7628.7 10955 8559.8 11021 7623.6 9634.9 13709 13328 12198 16059 14444 17866 8739.5 24916 22676 22396 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53915000 23225 119 21781 43672;43673 35127 35127 1 9606 Homo sapiens 0.11156388186827826 RPAPSGGASGDLR Unmodified 1239.632 0.63199703 3596 P47974 ZFP36L2 Zinc finger protein 36, C3H1 type-like 2 yes yes 0 0 1 6 0 1 28.39 28.422 3 0.0020746 5215 20230619_1886_Aki_TMTPro18x_K_F6 77.644 46.222 11722 9869.4 8614 10584 9600.6 10975 11431 11307 13936 12499 13931 11730 14623 13656 10086 12698 14626 13448 10817 9042 9036.9 10638 9957.6 11079 11494 11560 14049 12552 14302 12016 14698 13970 10600 12812 13942 12769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12443000 23226 3596 21782 43674 35128 35128 1 9606 Homo sapiens 0.021766306468407493 RPASVSSSAAVEHEQR Unmodified 1709.8445 0.844509 4175 Q7Z5L9-2;Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes no 0 0 1 6.5 1.5 1 1 27.479 27.53 4 1.4021E-14 4841 20230619_1885_Aki_TMTPro18x_K_F5 183.7 160.46 10209 6608 9820.5 7034.3 10834 12008 11142 9549.4 9115.6 9488 11579 12731 8604.7 6812 8546.1 10942 12139 11069 9424.9 6060.4 10007 7141.4 11175 11710 11155 9924.8 9497.7 9685.2 11643 12574 8873.5 7439 8902.9 10928 11572 10516 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31333000 23227 4175 21783 43675;43676 35129;35130 35129 2 9606 Homo sapiens 0.017980521961590057 RPAVASARPSILPSK Unmodified 1548.91 0.91000979 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;A0A024R2V0;P27816-4;Q86Y04;P27816-5;B5MEG9;H7C4C5 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 2 8 0 1 40.347 40.34 4 0.00098529 9623 20230619_1888_Aki_TMTPro18x_K_F8 84.41 47.428 78882 72610 72379 58558 78675 65425 72456 77260 84186 65294 69372 50030 59227 52546 73288 66560 73921 51289 72947 66359 74040 60517 80916 66039 73809 77750 84459 66190 71329 51668 61464 54842 74267 65840 70564 48959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57478000 23228 2902 21784 43677 35131 35131 1 9606 Homo sapiens 0.15751118179832702 RPCFSALTPDETYVPK Unmodified 1879.9138 0.91383411 2776 CON__P02769 yes yes 0 0 1 4.5 3.5 1 1 52.248 52.286 3;4 5.6306E-08 14453 20230619_1888_Aki_TMTPro18x_K_F8 124.2 102.66 + 76338 214960 247660 94207 652590 802460 377860 351830 602420 202220 197400 265500 103630 154050 212480 187400 281330 449030 72975 195420 242670 114490 639090 747280 403190 385870 583890 215550 218060 262660 114740 164470 217870 202340 269670 423100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1459799999.9999998 23229 2776 21785 43678;43679 35132;35133 35133 2 9606 Homo sapiens 0.009073751006781094 RPCPFWNDISQCGR Unmodified 1791.7933 0.79334182 4359 Q96HE7;G3V5B3;G3V3E6;G3V503 ERO1L ERO1-like protein alpha yes no 0 0 1 3 0 1 48.023 48.102 3 3.5592E-07 13307 20230619_1882_Aki_TMTPro18x_K_F3 139.61 122.67 103610 85743 90384 98948 126060 125310 110950 125740 127270 121120 134410 127500 138050 111080 123440 139860 147490 147770 95713 78613 93484 99208 127650 124770 113290 128230 129040 122840 137670 128660 140060 116690 127190 140470 140890 140270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142020000 23230 4359 21786 43680 35134 35134 1 9606 Homo sapiens -0.07088311373854594 RPDADLK Unmodified 813.43447 0.43446642 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2;A0A7P0Z484;A0A7P0TAR9;A0A7P0Z4H2;Q16094;Q6ZP56;D6RFL1 CANX Calnexin yes no 0 0 1 4.5 0.5 1 1 35.149 35.218 3 0.093633 7668 20230619_1883_Aki_TMTPro18x_K_F4 43.769 5.6088 144700 86257 134450 153810 164830 184990 166220 189940 196230 117990 187460 198440 142050 143370 181340 105480 182340 193400 133490 79603 138020 150070 168930 184650 168480 191740 197440 125620 190900 195870 148430 147670 183340 111780 174530 182720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 610610000 23231 1700 21787 43681;43682 35135 35135 1 9606 Homo sapiens 0.020286561748434906 RPDEGWEAR Unmodified 1114.5156 0.51557028 151 Q9UH99-2;Q9UH99;B4E2A6;A0A024R1P7;A0A8I5QKM0;B4DIU6;Q9UH99-3;B0QY60;A8K129;B0QY64;A0A024R1S6;B0QY63 SUN2;UNC84B SUN domain-containing protein 2 yes no 0 0 1 2.5 0.5 1 1 33.968 34.029 3 0.0027278 7175 20230619_1882_Aki_TMTPro18x_K_F3 92.428 70.342 71798 50578 63920 68396 78862 79020 91856 87679 95725 93387 91025 90257 102000 75314 76290 81293 102060 83079 66272 46477 65847 67750 81018 79301 91946 89112 97139 93962 94066 91226 102470 78560 79466 81695 97269 78960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118970000 23232 151 21788 43683;43684 35136 35136 1 9606 Homo sapiens -0.03710687853072159 RPDFAQQQAMQQLTFDGK Oxidation (M) 2124.0058 0.0058370195 4485 Q9C0J8;B9A053;Q9C0J8-3;Q9C0J8-2 WDR33 pre-mRNA 3' end processing protein WDR33 yes no 0 1 1 8 0 1 49.111 49.183 3 3.154E-05 13161 20230619_1888_Aki_TMTPro18x_K_F8 102.89 88.909 20919 18904 21987 23088 28767 28405 25291 26891 28319 21795 28657 23366 27988 23240 22214 26033 26631 30442 19364 17336 22350 23043 29223 28293 25802 27433 28667 22361 29313 23681 28309 24136 22957 26350 25464 28853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223940000 23233 4485 21789 43685 35137 35137 2790 1 9606 Homo sapiens -0.011205665528905229 RPDLLTMVVDYR Unmodified 1476.7759 0.77588407 2195 B1AKZ5;Q6FHL9;B1AKZ4;Q15121;Q15121-2 PEA15 Astrocytic phosphoprotein PEA-15 yes no 0 0 1 2 0 1 59.122 59.135 3 5.6004E-05 18327 20230619_1881_Aki_TMTPro18x_K_F2 99.668 77.47 23882 20195 25572 23569 21216 23317 26949 23222 28701 20824 18740 18421 19259 17179 24232 20774 20512 22847 22101 18516 25760 23535 22526 23600 26887 23682 28721 21117 19733 18772 19883 17956 24329 20945 19678 21670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12429000 23234 2195 21790 43686 35138 35138 1 9606 Homo sapiens 0.05656716362773295 RPDQQLQGEGK Unmodified 1254.6317 0.63166267 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 1 5 0.816 1 1 1 35.088 35.151 3 1.24E-06 7590 20230619_1883_Aki_TMTPro18x_K_F4 161.48 124.63 249470 117160 314420 303380 410540 448850 326350 391800 362760 290680 410530 465670 389190 352610 398560 172670 450690 419520 230560 108980 315350 292610 416390 441090 335360 401290 369130 304540 418470 460380 398450 358110 406670 191030 430500 395960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1182600000 23235 4246 21791 43687;43688;43689 35139;35140;35141 35139 3 9606 Homo sapiens 0.014532109269794091 RPDSSDDRYVMTK Oxidation (M) 1584.7202 0.72021968 2331 B2RNR6;Q96KR1;H0Y8W1 ZFR Zinc finger RNA-binding protein yes no 0 1 2 4.5 0.5 1 1 34.16 34.227 4 0.037845 7269 20230619_1885_Aki_TMTPro18x_K_F5 50.874 40.498 30444 26148 32937 34263 39718 37801 39124 43640 42652 41189 49144 50577 49017 38178 42740 42503 54723 44172 28178 24001 33356 33988 40646 38099 39610 44098 43505 42024 50116 50492 49716 40029 44225 42743 52170 41976 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73462000 23236 2331 21792 43690;43691 35142 35142 1441 1 9606 Homo sapiens -0.04875161615541401 RPDVVENQPDAASQLNVDASGNLAK Unmodified 2607.2889 0.2888714 1191 A0A8Q3WK80;A0A8Q3WK74;Q9NZL9-4;Q9NZL9-2;Q9NZL9;A0A140VJP2;A8K7A4;A0A8Q3WK84;H7C0X7;Q9NZL9-3;A0A8Q3WKR9 MAT2B Methionine adenosyltransferase 2 subunit beta yes no 0 0 1 5.33 0.471 2 1 49.48 49.557 3;4 9.5096E-45 13544 20230619_1885_Aki_TMTPro18x_K_F5 236.5 215.61 82405 75112 80232 83713 95121 98776 88529 86042 87496 101110 107150 105000 112240 101280 100710 110760 106110 118400 76235 68820 81915 84049 97385 98493 89645 89189 90068 101490 109220 106310 113870 105090 102970 111560 101560 112330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 520610000 23237 1191 21793 43692;43693;43694 35143;35144;35145 35143 3 9606 Homo sapiens 0.049518515857926104 RPEGAPAPAAR Unmodified 1091.5836 0.58359027 4073 Q5VSG8-3;Q5VSG8 MANEAL Glycoprotein endo-alpha-1,2-mannosidase-like protein yes no 0 0 1 5.5 0.5 1 1 26.87 26.923 3 0.00034956 4731 20230619_1886_Aki_TMTPro18x_K_F6 102.53 83.755 10606 9310.1 11833 11548 6816.2 7532.3 9528.2 10971 10093 9395.7 14825 15210 15019 15959 14667 6909.2 15790 17950 9821.2 8540.1 11839 11434 7545.6 8001.8 9484.9 10934 10425 9755.9 15001 15191 15323 15959 14938 7734.6 15112 16924 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17580000 23238 4073 21794 43695;43696 35146;35147 35147 2 9606 Homo sapiens 0.04146181797591453 RPEGPGAQAPSSPR Unmodified 1405.7062 0.7062246 3569 P40222 TXLNA Alpha-taxilin yes yes 0 0 1 5.5 0.5 1 1 28.967 29.02 3 0.00051808 5398 20230619_1886_Aki_TMTPro18x_K_F6 90.367 68.608 11042 7508.1 7766.5 8209.4 10010 17143 8957 8866.2 15603 11983 10857 13855 9719.7 9075.3 12549 8501.4 11712 10462 10174 6885.9 8204.8 8343.4 10264 16452 9291.5 9707.4 15323 12015 11337 13792 10098 9486.2 12641 8677.5 11205 9920.9 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107110000 23239 3569 21795 43697;43698 35148;35149 35149 2 9606 Homo sapiens 0.01959973738348708 RPEGYNLK Unmodified 975.51378 0.51377937 1204 A0A140VJT0;P63151;P63151-2;Q56VW8;A0A590UJY3;Q00005-7;Q59GC6;Q00005-4;Q00005-5;Q00005-3;Q00005;Q9Y2T4-2;Q9Y2T4;Q00005-2;Q9Y2T4-4;Q00005-6;Q9Y2T4-3 PPP2R2A;PPP2R2B;PPP2R2C Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform yes no 0 0 1 1 0 1 37.607 37.607 3 0.0046098 9029 20230619_1880_Aki_TMTPro18x_K_F1 94.309 42.455 148730 94751 124310 151390 155720 191320 130640 166460 272420 201630 222000 329850 304920 319980 156140 420590 490000 507140 137150 87282 128940 148620 159120 189730 137570 172650 267360 206050 234240 328740 302400 335480 181270 424960 465720 480710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58407000 23240 1204 21796 43699 35150;35151 35150 2 9606 Homo sapiens 0.02504303129001073 RPEIDCTLVANR Unmodified 1442.73 0.72999651 1266 D6R928;D6RGE3;A0A1B0GUH7;A0A1B0GWB5;B7Z4T2;B7Z3R9;E9PDB7;Q8TE99-2;Q8TE99 PXYLP1 2-phosphoxylose phosphatase 1 yes no 0 0 1 6.5 0.5 1 1 40.829 40.909 3 1.4461E-07 9905 20230619_1886_Aki_TMTPro18x_K_F6 142.08 123.27 41695 25982 38493 41314 40011 38433 33729 37781 47360 52789 55016 65449 67095 55358 53438 63792 73465 82035 38472 23935 39390 40406 41262 39071 34829 39049 47832 52922 56670 65490 67451 57914 55741 64952 70156 77692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50927000 23241 1266 21797 43700;43701 35152 35152 1 9606 Homo sapiens 0.026340711805232786 RPEIVVATPGR Unmodified 1193.6881 0.68805534 3008 G3V529;Q9GZR7;B4DM03;B4DKV2;Q9GZR7-2;Q59FS7;A0A1W2PRR2;F5GYL3;B4E300;Q7Z4W0;A0A087WXU8;Q7Z4X3 DDX24 ATP-dependent RNA helicase DDX24 yes no 0 0 1 3.67 3.09 1 1 1 38.266 38.282 3 0.002002 9342 20230619_1880_Aki_TMTPro18x_K_F1 86.288 50.939 181750 123430 167750 174630 216330 243190 226200 220240 306980 236920 252010 236890 268620 217390 216950 279610 273240 289470 167780 113500 172380 172990 221330 240110 229860 226960 305770 238740 261700 239980 271180 228260 224980 280330 261000 274770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 280930000 23242 3008 21798 43702;43703;43704 35153;35154 35153 2 9606 Homo sapiens 0.09895883554304419 RPELEDSTLR Unmodified 1214.6255 0.62551466 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1 PLEC Plectin yes no 0 0 1 3 0 1 36.517 36.572 3 0.00011569 8217 20230619_1882_Aki_TMTPro18x_K_F3 130.01 80.588 63736 53898 67237 63230 87682 95426 89093 95674 116230 103930 101020 91618 99054 99888 107170 114630 109150 105330 58974 49420 68306 63539 89513 94056 90568 97854 116260 104260 104240 93909 101660 103470 108980 114430 104390 100160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98984000 23243 3921 21799 43705 35155 35155 1 9606 Homo sapiens 0.026786926954628143 RPELLTHSTTEVTQPR Unmodified 1863.9803 0.9802742 2144;1327 A0A1W6S962;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9;A0A494C0Q7 GTF2I General transcription factor II-I no no 0 0 1 7 0 1 36.87 36.935 4 1.7836E-14 8033 20230619_1887_Aki_TMTPro18x_K_F7 180.81 152.53 45686 40513 49495 57715 71116 60323 56416 54937 47649 50937 54007 49917 41152 33114 56071 40306 43284 50234 42296 37216 50310 56876 71577 60713 57480 56407 49331 51633 54560 50143 43083 35122 55965 40992 41585 47582 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40563000 23244 1327;2144 21800 43706 35156;35157 35157 2 9606 Homo sapiens 0.08284326986949964 RPENSLLEETLHFDHAVR Unmodified 2162.0869 0.086864532 1803 A0A8Q3WK70;B3KPV5;O00566;A0A8Q3WKH7;U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes no 0 0 1 5.5 0.5 1 1 48.977 49.054 5 6.2842E-24 13347 20230619_1885_Aki_TMTPro18x_K_F5 202.5 180.06 33627 34854 46159 34785 36332 35361 28459 41487 42891 33797 42427 36079 43245 36164 46614 48376 28298 41071 31241 31891 45608 35202 38266 35887 29678 41716 42831 34648 43552 36596 44240 37936 46348 48006 27341 39040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 270740000 23245 1803 21801 43707;43708 35158 35158 1 9606 Homo sapiens 0.05230457481502526 RPESALLGGSEAGER Unmodified 1527.7641 0.76413341 3237 O15240;Q05BJ3 VGF Neurosecretory protein VGF;Neuroendocrine regulatory peptide-1;Neuroendocrine regulatory peptide-2;Antimicrobial peptide VGF[554-577] yes no 0 0 1 3.5 0.5 1 1 37.969 38.018 3 1.2869E-18 8722 20230619_1883_Aki_TMTPro18x_K_F4 163.56 135.59 37727 29288 41420 39291 21494 23076 36810 33953 33882 50391 41238 32761 57756 31940 38173 60551 41070 33599 34902 26900 41454 38666 24281 24823 36169 34392 35065 49467 42614 34088 57367 34540 39443 58811 39215 32226 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88221000 23246 3237 21802 43709;43710 35159 35159 1 9606 Homo sapiens 0.021361908731478252 RPETISEPK Unmodified 1055.5611 0.56112349 1400 A0A384MDM5;O95551;O95551-2 TDP2 Tyrosyl-DNA phosphodiesterase 2 yes no 0 0 1 4.5 0.5 1 1 35.003 35.072 3 0.0048077 7592 20230619_1885_Aki_TMTPro18x_K_F5 76.682 37.663 62816 42375 58299 60287 81735 83015 68112 72491 97433 75055 94308 87302 80758 68062 81226 75618 103570 86592 57986 38969 59950 59686 82689 81975 70372 74824 97384 76137 96256 87438 82896 71254 83780 76506 98758 82191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73482000 23247 1400 21803 43711;43712 35160 35160 1 9606 Homo sapiens 0.035565376093245504 RPETKPSSDLETSK Unmodified 1573.7948 0.79476484 1252 A0A140VKG4;Q9NRY5;E5RK42;E5RHP2;E5RHI8;E5RFK2;E5RGF9;I6L9D5 FAM114A2 Protein FAM114A2 yes no 0 0 2 6 0 1 36.631 36.699 4 9.21E-06 8203 20230619_1886_Aki_TMTPro18x_K_F6 119.56 93.433 241560 176110 205570 245430 253360 254940 219950 258430 325700 287610 336260 350750 302550 271540 224760 323020 342870 273960 222940 161860 212710 242190 258600 257170 227090 264490 326100 291050 342940 350490 306360 285210 236960 320800 326430 260980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 70101000 23248 1252 21804 43713 35161;35162;35163 35162 3 9606 Homo sapiens 0.030819244675058144 RPEVDGEK Unmodified 928.46141 0.46140945 1117 H7C5V3;A0A0S2Z5D2;A0A0S2Z563;A0A0S2Z5H0;Q9Y2Q9;E5RGC7;E5RK86;E5RFH3;H0YAT2 MRPS28 28S ribosomal protein S28, mitochondrial yes no 0 0 1 2 0 1 32.729 32.789 3 0.0037265 6805 20230619_1881_Aki_TMTPro18x_K_F2 86.898 50.373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23249 1117 21805 43714 35164 35164 1 9606 Homo sapiens -0.005682800046088232 RPEVDGVR Unmodified 926.49338 0.49337828 3364 V9HW53;O95865;H0Y7N1;A0A140T971;Q5SSV3;Q5SRR8 HEL-S-277;DDAH2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes no 0 0 1 3.5 0.5 1 1 29.662 29.744 3 0.0089666 5442 20230619_1883_Aki_TMTPro18x_K_F4 83.998 47.238 78554 47057 64890 75318 105660 106310 98694 93902 123830 91316 111710 116510 100780 88613 107680 72392 118170 105210 72411 43362 67732 74085 106320 104850 100620 96714 124120 93255 114750 116100 103560 91489 109750 74976 112870 99629 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162540000 23250 3364 21806 43715;43716 35165;35166 35166 2 9606 Homo sapiens 0.027191324691898444 RPEVDGVRK Unmodified 1054.5883 0.5883413 3364 V9HW53;O95865;H0Y7N1;A0A140T971;Q5SSV3;Q5SRR8 HEL-S-277;DDAH2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes no 0 0 2 7 0.816 1 1 1 32.508 32.552 4 0.070527 6331 20230619_1887_Aki_TMTPro18x_K_F7 42.689 18.839 261220 183300 249780 249220 403740 372630 313500 342720 427330 313450 398950 401760 351500 356190 339910 279970 514210 438940 241240 168450 256910 247850 404420 366850 324820 351210 427380 321290 408550 402160 360300 364840 355070 291700 489790 415500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 216340000 23251 3364 21807 43717;43718;43719 35167 35167 1 9606 Homo sapiens 0.06323065940387096 RPFDPNDR Unmodified 1015.4835 0.48354187 981 A0A0B4J1Z1;B4DEK2;C9JAB2;Q16629-3;Q16629-2;Q16629-4;Q16629;Q8NB80;F8WEA1 SRSF7 Serine/arginine-rich splicing factor 7 yes no 0 0 1 4.5 1.12 1 1 1 1 32.506 32.567 3 0.0015373 6623 20230619_1885_Aki_TMTPro18x_K_F5 106.2 72.329 293140 232270 240970 284180 319090 384330 298540 329730 424530 312660 367930 462280 453400 392970 293910 517890 574050 521700 270610 213110 250600 283950 325350 379670 306070 340090 422810 321720 384290 460240 452880 414080 318340 517920 546180 495660 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 638010000 23252 981 21808 43720;43721;43722;43723 35168;35169;35170 35170 3 9606 Homo sapiens -0.0235805553619457 RPFLASECTELPK Unmodified 1546.7814 0.78136338 4684 Q9ULR0;Q9ULR0-2;Q9ULR0-1;D6RC18;A8MVI5 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes no 0 0 1 8 0 1 48.339 48.405 3 2.9776E-06 12875 20230619_1888_Aki_TMTPro18x_K_F8 107.93 50.971 79866 58327 73245 81115 78146 102530 88647 85861 100870 95645 95204 115640 103860 90946 106390 109640 106770 124640 73750 53606 75103 80284 81219 101610 89139 89139 101860 96759 98494 115580 105870 95614 108190 110710 102270 118160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25640000 23253 4684 21809 43724 35171 35171 1 9606 Homo sapiens 0.029843951545899472 RPFLEPK Unmodified 885.50724 0.50723743 2144;1327 A0A1W6S962;X5D7Q9;P78347-5;A0A0A0VEB4;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52 GTF2I;GTF2I-RARA General transcription factor II-I no no 0 0 1 2.5 0.5 1 1 41.958 42.029 3 0.029248 10675 20230619_1881_Aki_TMTPro18x_K_F2 71.501 22.143 321780 256440 293660 312490 334220 387490 319600 325550 394500 276710 293870 225390 258570 189200 308840 295910 301370 164330 297280 235270 301370 311920 343890 384660 325400 335510 393290 280970 304350 230320 267260 201960 312640 288390 287470 157970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 314050000 23254 1327;2144 21810 43725;43726 35172 35172 1 9606 Homo sapiens 0.0599040996827398 RPGAALDPGCVLAK Unmodified 1423.7606 0.76056836 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 1 2 0 1 47.918 47.989 3 4.918E-05 13459 20230619_1881_Aki_TMTPro18x_K_F2 103.14 58.837 308540 264220 311310 298860 255200 287700 288900 293900 352350 340980 300370 273720 366680 276090 277920 389270 343370 348250 285400 242170 315060 299000 270550 292010 291440 301070 353470 340100 313260 281230 367750 290890 288400 386710 327940 331190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238020000 23255 3833 21811 43727 35173 35173 1 9606 Homo sapiens 0.06563849565554847 RPGAVATGDIGR Unmodified 1168.6313 0.63126874 2516 D6RC14;B4DW56;H0Y9G6;E7ETU7;B4DKM0;P09001 MRPL3 39S ribosomal protein L3, mitochondrial yes no 0 0 1 7 0.816 1 1 1 32.573 32.615 3 0.0025376 6346 20230619_1887_Aki_TMTPro18x_K_F7 64.675 33.302 62997 61053 59582 59354 75735 86006 74467 79547 81375 76528 89362 86310 91218 83033 87908 70128 97753 81512 58292 55862 61059 60473 77382 84820 75386 81585 82817 77816 91381 87052 92916 85065 89881 71397 93322 77359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 343950000 23256 2516 21812 43728;43729;43730 35174 35174 1 9606 Homo sapiens 0.053698359977943255 RPGCFLCR Unmodified 1064.5008 0.50078862 4423 Q9BRX8-2;Q9BRX8 FAM213A Redox-regulatory protein FAM213A yes no 0 0 1 6 0 1 36.362 36.422 3 0.0045739 8110 20230619_1886_Aki_TMTPro18x_K_F6 85.212 74.853 60314 65517 53760 41400 92780 144900 79573 75248 169350 20458 19373 25441 23525 19446 29470 15184 23799 25110 55834 59760 55734 45189 93479 137000 83573 80141 160970 24162 27141 25405 24232 20047 29468 15930 22835 23739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27704000 23257 4423 21813 43731 35175 35175 1 9606 Homo sapiens -0.02888174526401599 RPGDLNVK Unmodified 897.50321 0.50321468 1814 J3QWB6;A0A8V8TLF4;J3KMX2;A0A8V8TLC9;A0A8V8TLV3;B9EGA3;Q92925-3;Q92925-2;Q92925 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 yes no 0 0 1 8 0 1 37.411 37.396 3 0.012467 8451 20230619_1888_Aki_TMTPro18x_K_F8 72.879 53.901 89765 70109 78648 83808 97701 106250 97090 100700 124300 92951 114320 100250 112640 81242 95845 98509 139890 109450 82894 64315 81136 83813 100020 105620 98760 103020 124570 94633 117560 100870 114170 85428 100180 99320 133210 103960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37946000 23258 1814 21814 43732 35176 35176 1 9606 Homo sapiens 0.05036320474562217 RPGDVNVR Unmodified 911.49371 0.49371263 119 Q96GM5;A0A024R102;A0A024R137;Q96GM5-2;F8VRQ4;A8K9I5;F8VUB0;F8VZ70 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 0 0 1 6 0 1 28.386 28.418 3 0.0076065 5209 20230619_1886_Aki_TMTPro18x_K_F6 86.136 44.833 54488 30313 57764 63240 67685 60971 60625 64593 70429 61483 75112 75508 78315 68898 59917 42439 80933 83674 50308 28053 58566 61074 69222 61889 61870 65665 71357 62741 76963 75729 78974 69943 62306 45446 77252 79027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51130000 23259 119 21815 43733 35177 35177 1 9606 Homo sapiens 0.034425521890511845 RPGEEGTVMSLAGK Unmodified 1430.7188 0.71876312 3367 O96008;O96008-2;K7EKG4 TOMM40 Mitochondrial import receptor subunit TOM40 homolog yes no 0 0 1 7 0 1 46.08 46.168 4 0.0017969 11818 20230619_1887_Aki_TMTPro18x_K_F7 75.764 33.763 45170 36017 49758 44232 47020 58031 54601 52307 66329 48999 55117 48174 61537 44240 52673 54991 54698 49929 41795 33046 50101 44190 49309 57483 54971 53738 66401 49715 57306 48856 62126 46365 53839 54803 52282 47494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53933000 23260 3367 21816 43734 35178 35178 1 9606 Homo sapiens 0.020632490864045394 RPGGPSNVLR Unmodified 1051.5887 0.58867565 1688 A0A7P0T805;A0A7P0TAK4;A0A7P0T9B2;A0A7P0Z400;A0A7P0T8P7;A0A7P0T874;B1AA17;A0A7P0T9V8;A0A7P0TAF8;A0A7P0Z461;A0A7P0Z4K0;A0A7P0TA79;B3KS06;A0A7P0T8V1;A0A7P0TB80;A0A7P0TB16;I3L184;A0A7P0Z4Q7;Q5VIR6-2;Q5VIR6-3;Q5VIR6-1;Q5VIR6 HCCS1;VPS53 Vacuolar protein sorting-associated protein 53 homolog yes no 0 0 1 4 0 1 30.931 30.995 3 0.0025603 5914 20230619_1883_Aki_TMTPro18x_K_F4 83.775 41.584 28413 20696 29180 28778 40640 36256 34253 39864 40681 24880 33008 36654 33265 30741 35246 24977 36202 31779 26261 19021 29736 28500 41072 36186 35114 40056 40723 26322 34273 36466 34056 31589 35797 25615 34598 30128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23772000 23261 1688 21817 43735 35179 35179 1 9606 Homo sapiens 0.06494485660209648 RPGQAPPDQEALQVVYER Unmodified 2052.0389 0.038851707 4672 Q9UJY4 GGA2 ADP-ribosylation factor-binding protein GGA2 yes yes 0 0 1 5 0 1 46.429 46.506 3 4.7549E-19 12254 20230619_1885_Aki_TMTPro18x_K_F5 188.04 163.32 37850 32017 33210 32400 28616 31323 28645 29033 33093 46697 46310 44965 51132 43415 39098 55749 49257 45525 34971 29318 34038 32700 30106 31731 29051 30294 34055 46177 47078 45687 51462 45473 40622 55207 47005 43362 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44306000 23262 4672 21818 43736 35180 35180 1 9606 Homo sapiens 0.054913835615025164 RPGVTGENSNEVAK Unmodified 1456.727 0.72701962 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67;Q7Z3K3-3;A0A8V8TQQ8;Q7Z3K3-4;M0R2X2 POGZ Pogo transposable element with ZNF domain yes no 0 0 1 4.5 0.5 1 1 34.216 34.285 3 1.7292E-08 7248 20230619_1885_Aki_TMTPro18x_K_F5 146.84 105.3 97721 57583 84039 84427 121320 126490 99792 105400 131740 103020 130340 123520 131100 106450 107490 94095 145800 127830 90097 53008 87055 83568 122520 124210 102860 109020 132260 104950 133750 123880 132650 109790 111740 96702 139010 121120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147680000 23263 4164 21819 43737;43738 35181;35182 35181 2 9606 Homo sapiens 0.016925193273891637 RPGYGAYDAFK Unmodified 1243.5986 0.59857163 3389 Q53XC0;P05198;H0YJS4;G3V4T5 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 1 2 0 1 44.478 44.561 3 0.00059668 11972 20230619_1881_Aki_TMTPro18x_K_F2 84.289 51.683 548180 475390 494360 508470 582660 816890 636290 519370 811890 148990 130300 116660 141430 129880 225570 140650 150830 153070 506660 435480 508360 514720 601450 795370 642960 541560 787810 171140 166390 120730 148360 134140 223300 142140 145050 145240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 464650000 23264 3389 21820 43739 35183 35183 1 9606 Homo sapiens -0.013483711250728447 RPHNAIFVNFEDEEVPK Unmodified 2040.0065 0.0064889465 4749 Q9Y5Q8-2;Q9Y5Q8;Q9Y5Q8-3;Q5T7U1;Q5T7U4;Q5T7U0;H7BY84 GTF3C5 General transcription factor 3C polypeptide 5 yes no 0 0 1 5 0 1 49.38 49.457 4 2.4458E-06 13533 20230619_1885_Aki_TMTPro18x_K_F5 111.3 92.703 70966 61558 68981 69778 69613 76562 75540 80881 94870 93109 89753 94929 99164 84644 82556 98791 98996 103080 65629 56420 70252 69916 72446 77023 76440 82629 95381 93498 92758 95916 100140 88409 85238 99244 94588 97850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31530000 23265 4749 21821 43740 35184 35184 1 9606 Homo sapiens 0.02808596158479304 RPHTPTPGIYMGR Oxidation (M) 1497.7511 0.7510663 2322 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995-3;P62995;H7BXF3;H7C2L4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta yes no 0 1 1 4.5 1.12 1 1 1 1 31.839 31.902 4 0.0013668 6280 20230619_1883_Aki_TMTPro18x_K_F4 89.663 77.087 48899 37995 55233 54064 50129 66044 59393 64452 59838 59994 70029 76778 73740 58739 62528 74419 78788 78981 45250 34920 55514 53429 52776 65786 59402 65819 61334 61357 71574 76575 74592 62026 64742 74751 75228 74967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97808000 23266 2322 21822 43741;43742;43743;43744 35185 35185 1428 1 9606 Homo sapiens 0.022100812800090353 RPIAHLPCPGK Unmodified 1244.6812 0.68119582 2251 B2R7X3;Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes no 0 0 1 4.5 0.5 1 1 37.588 37.656 4 0.030136 8556 20230619_1885_Aki_TMTPro18x_K_F5 59.542 34.156 56398 47240 54280 60604 45261 54232 56183 52155 62089 69082 66639 62151 76968 54928 57397 72977 67448 63275 52141 43355 55222 60014 48060 55271 56213 53907 63147 68689 68558 63179 77225 57894 59348 72458 64408 60217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69387000 23267 2251 21823 43745;43746 35186 35186 1 9606 Homo sapiens 0.06864247402086221 RPIQGQYPYPYSR Unmodified 1623.8158 0.81577505 1792 Q8NFD5-1;A0A8Q3S458;Q8NFD5-3;Q8NFD5-2;Q8NFD5;A0A1B0GTJ8;A0A6Q8NVI4;A0A3F2YNW7;H0Y7H8;A0A1B0GWJ2;A0A1B0GV63;A0A1B0GVK1;A0A8J9GB59 ARID1B AT-rich interactive domain-containing protein 1B yes no 0 0 1 5 0 1 40.309 40.397 3 0.024974 9710 20230619_1885_Aki_TMTPro18x_K_F5 57.434 42.232 76411 65314 80186 82984 89701 104610 91313 93642 116770 93171 121590 106010 95653 91204 116630 94282 138800 111790 70704 59932 81311 82628 92535 103860 92775 96396 117560 94634 123320 106590 99539 94707 119320 95756 132400 106090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31714000 23268 1792 21824 43747 35187 35187 1 9606 Homo sapiens 0.02881979357698583 RPISADSAIMNPASK Oxidation (M) 1572.793 0.7929907 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;J3KS13;J3QL20 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 1 4.5 3.5 1 1 40.914 40.91 3 0.010438 9842 20230619_1888_Aki_TMTPro18x_K_F8 83.823 71.197 348730 294060 283760 343730 374330 364080 393250 337240 490770 426040 444530 492840 425870 362700 483960 512010 463800 499620 322020 269620 295360 343290 382060 366230 398130 348990 492440 427970 457930 492790 438030 386230 490170 511340 444200 474540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 585690000 23269 826 21825 43748;43749 35188;35189 35189 489 2 9606 Homo sapiens 0.02950592177899125 RPISADSAIMNPASK Unmodified 1556.7981 0.79807608 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;J3KS13;J3QL20 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 1 1.5 0.5 1 1 44.655 44.696 3 4.9142E-14 12181 20230619_1880_Aki_TMTPro18x_K_F1 180.06 139.3 399570 276140 352730 348050 364360 462020 403500 402070 490070 401520 378020 362870 424260 342970 358360 390270 433310 415810 368750 253580 362440 347080 379310 456960 407190 414760 489770 404910 395000 369490 428400 357140 369860 392780 413740 394740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 970510000 23270 826 21825 43750;43751 35190;35191 35190 2 9606 Homo sapiens 0.041948960405306934 RPIVACELGR Unmodified 1169.6339 0.63391128 919 B2RB99;B4DXL5;A0A0A0MQR2;Q9BY42;A2A2L5;B4DEJ8;A2A2L6 RTFDC1 Protein RTF2 homolog yes no 0 0 1 1 0 1 37.864 37.864 3 0.0015512 9148 20230619_1880_Aki_TMTPro18x_K_F1 90.913 73.746 70917 65503 68879 67288 75232 85852 80039 79130 96834 70895 67174 55303 74831 63817 62739 80701 89058 58312 65612 59970 70232 68093 77817 85270 80922 81061 96461 71692 70564 57227 75606 66421 65548 79530 84743 55735 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60420000 23271 919 21826 43752 35192 35192 1 9606 Homo sapiens 0.05587968131089838 RPIVEFSLEDR Unmodified 1359.7147 0.71466402 430 A0A024R753;Q9NW13;Q9NW13-2 RBM28 RNA-binding protein 28 yes no 0 0 1 5.5 0.5 1 1 48.718 48.796 3 0.00011769 13250 20230619_1885_Aki_TMTPro18x_K_F5 119.69 73.81 156350 114150 129900 160010 158790 178540 170760 162840 208400 172410 177890 171390 186450 151780 173780 191880 174220 194970 144280 104920 134790 157970 163110 178730 172570 167730 208880 173800 184280 173440 189370 159390 177070 192290 166830 185070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 278760000 23272 430 21827 43753;43754 35193;35194 35193 2 9606 Homo sapiens 0.04919527654988087 RPLDDGVGNQLGALVHQR Unmodified 1944.029 0.028955723 507 A0A024R8A7;Q96I24 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 0 0 1 1 0 1 47.655 47.655 4 7.512399999999999E-19 13370 20230619_1880_Aki_TMTPro18x_K_F1 185.99 147.47 41112 32907 37079 38058 40144 48309 43112 45588 51981 48779 49781 53308 53325 42741 48677 50346 54267 56840 37979 30175 38060 38155 41588 48003 43577 46830 52368 49265 51357 53536 54077 44861 49897 50830 51886 53909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 638900000 23273 507 21828 43755 35195 35195 1 9606 Homo sapiens 0.09470240346740866 RPLEDGDQPDAK Unmodified 1339.6368 0.63680763 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;Q96AE4;E9PEB5;A0A1Z1G4M2;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 0 1 2.5 1.12 1 1 1 1 36.167 36.207 3 2.5644E-05 8023 20230619_1882_Aki_TMTPro18x_K_F3 121.86 93.951 442870 292750 399310 443700 567150 602590 503140 483790 700940 483920 564130 556480 612750 488060 474070 490740 677570 588940 408690 269450 412030 437430 574390 594400 516860 502470 696810 491880 587080 559300 617270 506130 495750 498600 645710 558670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 641910000 23274 2644;4322 21829 43756;43757;43758;43759 35196;35197;35198 35198 3 9606 Homo sapiens -0.019425300010425417 RPLEDGDQPDAKK Unmodified 1467.7318 0.73177065 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;Q96AE4;E9PEB5;A0A1Z1G4M2;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 0 2 4 1 1 1 36.218 36.291 4 0.0057334 8085 20230619_1882_Aki_TMTPro18x_K_F3 71.692 51.229 134500 100570 133990 146100 181180 169380 156670 164430 185200 153710 172830 171460 173370 132450 147300 143090 192050 151080 124300 92463 136900 144050 183590 169430 160280 168010 186510 156480 177890 171910 175630 138540 152670 144110 183040 143560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92535000 23275 2644;4322 21830 43760;43761 35199;35200 35199 2 9606 Homo sapiens 0.016614034701206037 RPLEMEQQQAYRPEMK Unmodified 2032.9823 0.98226481 95 Q9BUJ2;A0A0A0MRA5;Q9BUJ2-2;Q9BUJ2-4;A8K6U7;A8K3W4;B7Z4B8;A0A024R0J9;Q9BUJ2-3;M0QYZ0;M0QZV6;M0R0K8;M0R203 HNRNPUL1;HNRPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes no 0 0 2 7 0 1 42.219 42.294 4 1.6148E-05 10218 20230619_1887_Aki_TMTPro18x_K_F7 88.283 71.598 52825 43410 56433 59758 48575 73819 60202 62204 84766 79498 72146 74194 87077 77316 75234 76265 84468 82547 48875 39873 56956 59166 51582 73245 60789 64794 84479 79303 75275 75631 87868 79603 77221 77018 80716 78344 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129460000 23276 95 21831 43762 35201 35201 1 9606 Homo sapiens 0.007092964089224552 RPLFLAPDFDR Unmodified 1345.7143 0.71427009 3075 H3BS72;Q9P035;H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 0 0 1 1.5 0.5 1 1 53.288 53.304 3 1.4273E-08 15683 20230619_1880_Aki_TMTPro18x_K_F1 155.99 126.57 177980 144380 181490 187160 150660 199080 198020 199560 225150 198680 217630 224600 219910 191670 246290 210970 200730 219660 164590 132540 183700 185660 160460 200310 197800 203830 227400 201660 223880 225690 225590 199790 247270 212330 192630 208470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 571610000 23277 3075 21832 43763;43764 35202;35203 35202 2 9606 Homo sapiens 0.05524152725774911 RPLHSAQAVDVASASNFR Unmodified 1924.9868 0.98675656 4514 Q9H4A4;A6NKB8 RNPEP Aminopeptidase B yes no 0 0 1 2.5 0.5 1 1 38.458 38.516 4 3.6691E-19 9090 20230619_1881_Aki_TMTPro18x_K_F2 190.24 179.58 44686 35627 53750 48549 61278 58068 54118 54390 59637 48632 57879 57670 55841 49015 69883 59908 62660 56861 41383 32724 53913 48098 62763 57927 55174 55666 60343 49750 59414 57872 57729 51401 70358 59895 59982 54060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 381030000 23278 4514 21833 43765;43766 35204;35205 35204 2 9606 Homo sapiens 0.06126264938370696 RPLMVLGSQALLTPTSADK Oxidation (M) 2013.0929 0.092861113 1903 A1L0T0;M0R026;Q59GP4;M0QZX5 ILVBL Acetolactate synthase-like protein yes no 0 1 1 4 0 1 54.596 54.611 3 0.01316 16053 20230619_1883_Aki_TMTPro18x_K_F4 71.872 50.314 39160 32862 35786 39236 37104 36406 42536 43187 45544 44579 54721 58516 50170 46316 52101 56940 57735 62271 36190 30137 36670 39077 38550 37202 42678 43699 46573 45386 55548 58366 51467 48719 53286 57332 55218 59072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84330000 23279 1903 21834 43767 35206 35206 1222 1 9606 Homo sapiens 0.12683839668807195 RPLMVLGSQALLTPTSADK Unmodified 1997.0979 0.097946491 1903 A1L0T0;M0R026;Q59GP4;M0QZX5 ILVBL Acetolactate synthase-like protein yes no 0 0 1 5 0 1 57.975 58.031 3 8.2786E-08 17084 20230619_1885_Aki_TMTPro18x_K_F5 117.65 100.58 51647 38824 44991 49946 42934 54007 49540 54822 58604 64215 65128 78215 74055 64621 64545 79203 81227 106420 47681 35647 46263 49577 45017 54301 49874 56190 59488 64799 66991 78274 74873 67911 66811 80819 77731 100700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64705000 23280 1903 21834 43768 35207 35207 1 9606 Homo sapiens 0.13928143531438764 RPLPCTPGDCPSR Unmodified 1511.6973 0.69731617 1154 A0A0U1RR39;A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1ZJB3;A0A0U1ZBT6;A0A0U1ZF21;A0A0U1ZF71;A0A0U1ZBR1;A0A0U1ZID9;A0A0U1ZI18 CBL E3 ubiquitin-protein ligase CBL yes no 0 0 1 7.5 0.5 1 1 33.906 33.945 3 3.1964E-08 7044 20230619_1888_Aki_TMTPro18x_K_F8 175.21 155.47 33987 26812 26836 29204 37006 40792 33402 29048 41619 32185 35619 34770 37912 35682 34049 41266 42587 37460 31365 24574 28022 29446 37569 40111 34121 30581 41674 32481 36920 35234 38474 37049 35200 41149 40629 35639 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72062000 23281 1154 21835 43769;43770 35208;35209 35209 2 9606 Homo sapiens -0.03806459213956259 RPLPPAAQER Unmodified 1133.6305 0.63054046 2134 Q53Y97;Q53FB7;A8K9A5;P04818;P04818-3;P04818-2 TYMS Thymidylate synthase yes no 0 0 1 7.5 0.5 1 1 29.843 29.904 3 0.00058926 5600 20230619_1888_Aki_TMTPro18x_K_F8 110.39 88.881 40287 29375 34332 35341 31886 37223 39547 35502 46119 22521 21880 18153 23418 15765 22559 23758 26168 19944 37182 26956 35344 35232 33557 37453 39609 36059 45567 23370 23637 18579 23800 16782 23157 23529 24959 19006 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27012000 23282 2134 21836 43771;43772 35210;35211 35211 2 9606 Homo sapiens 0.06907041348745224 RPLPTQQQPQPSQK Unmodified 1631.8744 0.87435256 1597 Q59EC8;A0A669KB29;Q9P0U4;Q9P0U4-2;K7EKZ6;K7EQZ1;K7EQ21 CXXC1 CXXC-type zinc finger protein 1 yes no 0 0 1 3 0 1 34.972 35.033 3 0.00025136 7579 20230619_1882_Aki_TMTPro18x_K_F3 94.287 62.579 22697 15279 17323 18382 25727 24794 22100 25460 31462 27608 32274 29104 27827 23646 26164 32281 34080 27108 20923 14026 18171 18397 25964 24609 22785 26000 31539 27836 32852 29315 28472 25017 27103 31995 32483 25828 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18015000 23283 1597 21837 43773 35212 35212 1 9606 Homo sapiens 0.08369035932173574 RPLQGEWR Unmodified 1040.5516 0.55156186 4210 Q8IXT5 RBM12B RNA-binding protein 12B yes yes 0 0 1 1 0 1 35.891 35.891 3 0.01339 8326 20230619_1880_Aki_TMTPro18x_K_F1 72.23 56.027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23284 4210 21838 43774 35213 35213 1 9606 Homo sapiens 0.03290814114461682 RPLRPQVVTDDDGQAPEAK Unmodified 2091.0709 0.070880117 4555 Q9HDC9;Q9HDC9-2 APMAP Adipocyte plasma membrane-associated protein yes no 0 0 2 4.5 0.5 1 1 38.38 38.447 4 2.7375E-07 8855 20230619_1883_Aki_TMTPro18x_K_F4 113.29 91.754 216840 163240 222260 220090 244900 266620 243540 240350 305280 277110 301050 287990 295950 255560 297140 290820 291720 305570 200450 149960 225650 218180 252590 265450 247570 248320 307270 278520 308790 290810 302270 266560 301800 292560 279260 290020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 569980000 23285 4555 21839 43775;43776 35214;35215;35216 35214 3 9606 Homo sapiens 0.068987512446256 RPLTEPPVR Unmodified 1063.6138 0.61382777 3336 O94888;C9JAT7;B4E126 UBXN7 UBX domain-containing protein 7 yes no 0 0 1 4.5 3.5 1 1 33.678 33.676 3 0.0026936 7441 20230619_1880_Aki_TMTPro18x_K_F1 85.807 59.293 97699 73635 110960 105850 143210 138070 132440 122810 123870 91617 118280 108080 110470 91827 142230 89173 151850 113630 90396 67692 112050 104650 145660 136830 133890 125700 126340 94816 121310 108470 114510 95159 144290 91201 144930 107810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94388000 23286 3336 21840 43777;43778 35217;35218 35217 2 9606 Homo sapiens 0.08456540462793782 RPMEEDGEEK Unmodified 1218.5187 0.51866633 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;Q59GP7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 1 1.5 0.5 1 1 33.463 33.492 3 1.2625E-05 7387 20230619_1880_Aki_TMTPro18x_K_F1 150.86 114.9 38786 22467 61730 51685 82672 88549 65351 78891 70806 45979 83199 117890 70106 73893 91746 32739 104340 114260 35974 20823 61050 50237 83666 86449 67127 80345 72191 50416 84490 114730 73097 75500 93271 38317 99779 107630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148860000 23287 3823 21841 43779;43780 35219 35219 1 9606 Homo sapiens -0.08185225581223676 RPMLGPSEETAPQPPPAGVR Oxidation (M) 2102.0579 0.05787259 2333 B4DYK9;B7ZMH1;B2RWN6;F5H1N7;B7ZVZ4;A0A2R8Y6P1;Q6ZU35;A0A024RD92 KIAA1211;hCG_39854 Uncharacterized protein KIAA1211 yes no 0 1 1 6 0 1 40.257 40.35 3 3.4844E-07 9667 20230619_1886_Aki_TMTPro18x_K_F6 103.99 88.793 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23288 2333 21842 43781 35220 35220 1442 1 9606 Homo sapiens 0.05092596860913545 RPNKPLFTALVTQCQK Unmodified 1900.0353 0.035286654 2564 B4DP80;Q8NCW5;Q8NCW5-2;A0A7P0TAG8;A0A7P0T9Y2;Q5T3I4;Q6PGN4;Q5T3I3;A0A7P0Z426;A0A7P0TA18 APOA1BP NAD(P)H-hydrate epimerase yes no 0 0 2 8 0 1 49.695 49.768 4 2.5144E-14 13441 20230619_1888_Aki_TMTPro18x_K_F8 179.41 162.33 234860 236900 243330 213540 234660 259340 261680 241760 284620 299470 256020 247980 277780 228920 217770 284500 292580 248930 217550 216610 246170 218450 245120 258570 262990 249710 287750 298010 264870 253390 280000 239740 226970 282840 278910 236970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 432380000 23289 2564 21843 43782 35221 35221 1 9606 Homo sapiens 0.12127042253905529 RPNLETYYER Unmodified 1339.6521 0.65206377 1624 Q8TB36;Q8TB36-2;A0A6Q8PGS2;A0A6Q8PGL3;B4DIH2;A0A6Q8PH79;A0A6Q8PFG4;A0A7I2RYU0;A0A6Q8PEZ4;A0A6Q8PGU0 GDAP1 Ganglioside-induced differentiation-associated protein 1 yes no 0 0 1 6.5 0.5 1 1 39.428 39.505 3 0.0006334 9315 20230619_1886_Aki_TMTPro18x_K_F6 96.604 70.486 374300 295610 332550 378230 297970 280280 347160 366510 370300 404240 429720 432390 376220 378420 462520 436530 432830 489010 345710 271350 340960 373970 313250 292990 348120 369580 378380 407170 435990 435860 390120 395010 467060 440770 414810 463710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 478010000 23290 1624 21844 43783;43784 35222;35223 35222 2 9606 Homo sapiens -0.004176184132120397 RPNNLVIGR Unmodified 1037.6094 0.60941109 2112 A8K800;Q9H7B2;Q5VXN0;B4DWS5 RPF2 Ribosome production factor 2 homolog yes no 0 0 1 4.5 0.5 1 1 34.63 34.699 3 0.00014325 7414 20230619_1885_Aki_TMTPro18x_K_F5 118.5 82.551 44568 39011 42628 43547 48583 51451 55895 53605 62139 54899 55625 56190 58805 46188 50325 59877 63698 56729 41214 35749 43565 43730 50174 51492 56109 54644 62677 55458 57516 56653 59504 48711 52111 59748 60768 53940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45248000 23291 2112 21845 43785;43786 35224 35224 1 9606 Homo sapiens 0.09211076039900945 RPNPDILDHER Unmodified 1360.6848 0.68476088 1230 Q9UQ35;A0A140VK53;Q9UQ35-2;I3L4D8;Q05CV9;Q05BI2;I3L0N7 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 0 0 1 3.5 0.5 1 1 34.012 34.071 4 1.6386E-06 7211 20230619_1882_Aki_TMTPro18x_K_F3 160.52 137.61 83379 54301 76999 97300 85229 101540 86966 87095 120650 106480 113720 121920 121220 102620 112490 109990 129280 128340 76951 50094 79001 94671 88059 101940 88621 90525 120700 107090 117370 122360 123080 106910 115450 111460 123520 121710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100620000 23292 1230 21846 43787;43788 35225;35226 35225 2 9606 Homo sapiens 0.01884588709617674 RPNPDILDHERK Unmodified 1488.7797 0.77972389 1230 Q9UQ35;A0A140VK53;Q9UQ35-2;I3L4D8;Q05CV9;Q05BI2;I3L0N7 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 0 0 2 5.5 0.5 1 1 34.893 34.963 5 0.0025644 7584 20230619_1886_Aki_TMTPro18x_K_F6 85.42 64.58 58786 51131 60167 58201 65428 65472 68650 65243 68750 70024 74081 64431 71895 61248 62681 79579 76702 71200 54390 46865 61067 58320 67555 65681 69045 66796 70262 70340 75592 65617 73019 64247 64767 79157 73214 67735 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120920000 23293 1230 21847 43789;43790 35227 35227 1 9606 Homo sapiens 0.05488522180803557 RPNYGEIPVQEHLLR Unmodified 1819.9693 0.96931558 1554 B2RMV2;A0A494C1J1;Q69YQ0-2;Q69YQ0 CYTSA;SPECC1L Cytospin-A yes no 0 0 1 8 0 1 43.619 43.629 4 6.3949E-08 10943 20230619_1888_Aki_TMTPro18x_K_F8 138.57 102.18 24461 19883 22317 24972 27250 32799 26123 25696 34443 24861 25659 26402 30849 22744 27403 26858 28872 29678 22601 18245 22942 24894 27925 32400 26653 26720 34248 25245 26971 26610 31137 23820 28003 27084 27616 28156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71189000 23294 1554 21848 43791 35228 35228 1 9606 Homo sapiens 0.09212969403370153 RPPASDGLDLSQAAAR Unmodified 1623.8329 0.83288168 3949 Q16352 INA Alpha-internexin yes yes 0 0 1 6.5 0.5 1 1 40.98 41.061 3 2.8887E-11 9902 20230619_1886_Aki_TMTPro18x_K_F6 160.43 136.75 248070 220420 239550 203970 123210 116160 131010 123110 148480 248830 265770 256910 273550 243850 260130 291010 290270 284730 229440 201660 241940 206500 137300 124610 132570 128850 155330 244830 267450 260020 278350 254410 266590 291250 277400 270530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 769770000 23295 3949 21849 43792;43793 35229;35230 35229 2 9606 Homo sapiens 0.04591855172884607 RPPEACEELR Unmodified 1255.5979 0.5979197 4200 Q86Y56;Q86Y56-2 DNAAF5 Dynein assembly factor 5, axonemal yes no 0 0 1 2 0 1 32.998 33.056 3 8.813E-05 6892 20230619_1881_Aki_TMTPro18x_K_F2 113.22 67.066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23296 4200 21850 43794 35231 35231 1 9606 Homo sapiens -0.019655338364373165 RPPEDDFR Unmodified 1030.4832 0.48320752 4210 Q8IXT5;B9ZVT1 RBM12B RNA-binding protein 12B yes no 0 0 1 1.5 0.5 1 1 33.042 33.071 3 0.0052954 6924 20230619_1881_Aki_TMTPro18x_K_F2 85.731 37.907 86767 73180 84644 93230 99490 122970 103940 99458 126040 106670 119900 116310 124430 102830 110160 127910 120290 123770 80230 67155 86461 92859 102420 121510 105200 103430 126840 107780 123470 117240 126150 107840 112930 127860 115020 117590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81053000 23297 4210 21851 43795;43796 35232 35232 1 9606 Homo sapiens -0.030814752560672787 RPPEDFETPSGERPR Unmodified 1768.8493 0.84926002 4276 Q8WUA4;Q53QN0;Q8WUA4-2 GTF3C2 General transcription factor 3C polypeptide 2 yes no 0 0 2 3.5 0.5 1 1 34.411 34.467 4 4.4422E-07 7376 20230619_1882_Aki_TMTPro18x_K_F3 121.27 107.01 76991 42789 68660 74105 72771 81496 80290 78662 86867 90309 94378 101590 93995 87176 87152 107970 106670 105310 70985 39487 70538 72313 75492 81733 80733 80878 88448 90979 96514 102130 95688 91451 89935 107960 101860 100060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126760000 23298 4276 21852 43797;43798 35233 35233 1 9606 Homo sapiens -0.0044106366106007044 RPPEEDFR Unmodified 1044.4989 0.49885759 4210 Q8IXT5 RBM12B RNA-binding protein 12B yes no 0 0 1 2.5 0.5 1 1 33.215 33.28 3 0.082285 6881 20230619_1881_Aki_TMTPro18x_K_F2 45.368 10.268 32564 27817 30090 34280 39852 40506 39546 40767 44693 35155 41853 44329 46531 32896 39896 36806 46343 41387 30101 25517 30944 34168 40594 40499 40045 41476 45098 36114 43294 44191 46984 34547 41019 37194 44244 39279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75825000 23299 4210 21853 43799;43800 35234 35234 1 9606 Homo sapiens -0.021611887390008633 RPPEEDWR Unmodified 1083.5098 0.50975662 4210 Q8IXT5 RBM12B RNA-binding protein 12B yes yes 0 0 1 2 0 1 34.616 34.673 3 0.090091 7533 20230619_1881_Aki_TMTPro18x_K_F2 38.804 14.029 56833 50577 64256 60197 75106 82532 71203 75273 78925 71728 80345 82583 82361 68891 72267 68253 85493 76801 52638 46373 64796 60311 77029 81595 72282 77275 80017 73018 82466 82855 83512 71492 74364 69104 81611 72887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27157000 23300 4210 21854 43801 35235 35235 1 9606 Homo sapiens -0.028657863647367776 RPPENEAPPVPFLHAQR Unmodified 1954.0173 0.017328404 1310 A0A1W2PR73;Q969N2;A0A1W2PPR6;A0A1W2PNP0;A0A1W2PPC3;A0A1W2PP57;Q969N2-5;Q969N2-4;A0A1W2PPS0;A0A1W2PP53;Q969N2-2;A0A1W2PRZ8;B7ZAP3;A0A1W2PQ52;B7Z1F1;B7Z1N3;B7Z3L1;B7Z4T7;A0A1W2PPQ7;A0A1W2PSC5;A0A1W2PQY1;A0A1W2PP13 PIGT GPI transamidase component PIG-T yes no 0 0 1 7.5 0.5 1 1 43.604 43.648 4 4.6586E-09 10925 20230619_1888_Aki_TMTPro18x_K_F8 127.83 117.22 61792 54694 67472 67375 72428 71846 81070 72477 86172 63355 82663 69727 72500 55034 75073 59154 70718 63153 57210 50165 68141 67074 74979 72349 81379 73789 87242 64743 84458 70043 74380 57504 75962 59663 67652 59969 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 90153000 23301 1310 21855 43802;43803 35236;35237 35236 2 9606 Homo sapiens 0.07848043323383536 RPPEPTTPWQEDPEPEDENLYEK Unmodified 2795.2562 0.25623386 4172 Q7Z4X2;Q9NX14;Q9NX14-2;A0A8I5KTD1;A0A8J8YU24;A0A8I5KQF7 NDUFB11 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial yes no 0 0 1 2 0 1 53.044 53.077 3 3.6596E-05 15814 20230619_1881_Aki_TMTPro18x_K_F2 83.606 76.495 5487.3 4109.6 3800.6 5253.2 3774 5782.8 6643.2 4235.1 6617.3 5454.5 4980.1 6720.3 6060 6015.1 6837.6 8144.4 6777 7748.3 5058.4 3773.1 4013.8 5214 4014.1 5767.7 6520.6 4475.6 6673.9 5491.2 5250.2 6739 6195.2 6334.8 6943.7 8123.8 6491.5 7360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22864000 23302 4172 21856 43804 35238 35238 1 9606 Homo sapiens -0.06958400327721392 RPPESPPIVEEWNSR Unmodified 1791.8904 0.89039656 4432 Q9BTL3;A0A3B3IU46 FAM103A1 RNMT-activating mini protein yes no 0 0 1 5 0 1 46.876 46.953 3 1.6829E-07 12416 20230619_1885_Aki_TMTPro18x_K_F5 123.42 96.875 36260 29907 39847 40336 46403 49644 43514 46859 48149 35774 37097 38889 38242 33380 49819 37397 38956 33298 33557 27463 40278 39995 47582 49421 44195 47755 48325 36861 38678 39155 39544 34812 49784 37336 37338 31691 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44253000 23303 4432 21857 43805 35239 35239 1 9606 Homo sapiens 0.026126973784357688 RPPEVFEQEIR Unmodified 1398.7256 0.72556306 4481 Q9C0C9;K7ES11 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 0 0 1 4 0 1 43.972 44.016 3 0.0016449 11252 20230619_1883_Aki_TMTPro18x_K_F4 86.772 48.407 112610 98597 114320 119460 125960 136860 126720 123410 148540 139880 154220 138240 154230 141510 144070 177330 170010 166010 104190 90422 116190 119160 129930 136780 128420 127450 150300 140490 157850 140670 157020 147700 148290 176890 162390 157810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135080000 23304 4481 21858 43806 35240 35240 1 9606 Homo sapiens 0.04214930029297648 RPPGADAEGSER Unmodified 1240.5796 0.5796271 1384 A0A2X0SFJ0;O75962-4;O75962;E7EPJ7;O75962-5;A0A8V8TNC6 TRIO Triple functional domain protein yes no 0 0 1 1 0 1 26.65 26.65 3 0.024845 4702 20230619_1880_Aki_TMTPro18x_K_F1 59.898 32.156 2897.5 1347.9 2959.6 3768 6852.2 4629.9 4555.6 7969.6 6222.5 3417.3 3850.5 4951.1 3449 4906.4 4352.2 1737 5267.9 3715.9 2672.4 1255.9 3061.3 3615.6 6727.1 4693.1 4781.8 7775.9 6144.1 3743.5 4054 4948.8 3591.4 4887.7 4444.5 1918.1 5020.7 3514.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4855300 23305 1384 21859 43807 35241 35241 1 9606 Homo sapiens -0.031039524867765067 RPPGEPLQGFSK Unmodified 1311.6935 0.69353465 1902 A1L020 MEX3A RNA-binding protein MEX3A yes yes 0 0 1 1.5 0.5 1 1 44.137 44.179 3 0.021355 11726 20230619_1881_Aki_TMTPro18x_K_F2 60.901 40.202 138350 126010 126100 160260 169160 178430 172700 163420 187880 153660 164740 151300 145100 111920 161040 159240 168600 145250 127920 115610 129980 159200 172350 178710 174310 167760 189510 155790 169210 152450 149420 119280 163880 158490 161080 138200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170170000 23306 1902 21860 43808;43809 35242 35242 1 9606 Homo sapiens 0.05015562346147817 RPPGPTTSPASTSLSSPGQR Unmodified 1980.0025 0.0024662011 3786 Q01970-2;Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes no 0 0 1 3.67 0.471 1 2 36.087 36.138 3 9.7749E-37 7970 20230619_1883_Aki_TMTPro18x_K_F4 230.29 211.46 29432 23104 22248 31553 35619 43436 33126 31163 40564 36666 45078 49597 37809 38774 38593 39337 44997 48442 27153 21224 23463 31291 35935 42721 33758 32842 41060 37172 45750 49371 38904 40356 39590 40033 43015 45901 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61300000 23307 3786 21861 43810;43811;43812 35243;35244;35245 35244 3 9606 Homo sapiens 0.05166506664704684 RPPPAPAQPPEPEALPTIYVVTPTYAR Unmodified 2927.5545 0.55452856 4425;3330 O94766;Q5U676;B4DNL8;O94766-2;G3V150;E9PNA1;Q9BS14 B3GAT3;GANAB Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 no no 0 0 1 2 0 1 57.714 57.729 3 8.4711E-07 17797 20230619_1881_Aki_TMTPro18x_K_F2 96.338 83.3 7608.4 8081.5 8183.6 10128 6978.4 9144.5 7796.4 9498.2 10317 12701 12519 10294 10605 9855.7 11353 11809 12402 14877 7052.8 7409.4 8259.8 10045 7380 9327 7900.8 9760.3 10464 12587 12642 10549 10926 10290 11593 12004 11873 14088 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30578000 23308 3330;4425 21862 43813 35246 35246 1 9606 Homo sapiens 0.1678534744632998 RPPPASAPAPQPAPTPSVGSSFFSSLSQAVK Unmodified 3062.5825 0.58253422 4190 Q92777;Q86VA8;Q92777-2;Q59GM1 SYN2 Synapsin-2 yes no 0 0 1 6 0 1 61.215 61.27 4 4.7294E-10 18675 20230619_1886_Aki_TMTPro18x_K_F6 103.07 92.669 44160 38531 37482 51030 57762 74650 34545 28553 36599 46847 49850 54521 59999 50189 52080 64153 68132 78089 40800 35369 39014 50734 57885 72609 36256 32885 37789 46637 50999 54858 60545 52679 54052 64974 65102 73986 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59826000 23309 4190 21863 43814 35247 35247 1 9606 Homo sapiens 0.13374625635697157 RPPPEHFR Unmodified 1034.541 0.54099717 4210 Q8IXT5;B9ZVT1 RBM12B RNA-binding protein 12B yes no 0 0 1 8 0 1 26.409 26.442 3 0.058535 4397 20230619_1888_Aki_TMTPro18x_K_F8 55.112 27.858 7965.9 7316.3 8077 8946.1 8572.9 7376.8 8315.7 8001.2 10530 9972.9 14063 16842 14334 13778 10121 11943 18265 15727 7372.3 6709.2 8204.9 8881.3 8844.9 7600.9 8472 8192.4 10736 10182 14285 16670 14438 14208 10823 12240 17379 14907 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11918000 23310 4210 21864 43815 35248 35248 1 9606 Homo sapiens 0.025108314600174708 RPPQECCSPELGR Unmodified 1584.7137 0.71369452 4756 Q9Y6C2 EMILIN1 EMILIN-1 yes yes 0 0 1 4.5 0.5 1 1 33.347 33.416 3 1.1282E-05 6830 20230619_1883_Aki_TMTPro18x_K_F4 120.59 100.49 18381 15332 17020 19838 21083 26511 27649 22991 28989 26094 38293 44600 32142 33626 36714 31729 38596 39436 16988 14073 17493 19743 21776 26209 27522 23833 29786 26772 38636 44040 33255 34912 37329 32370 36916 37372 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 197070000 23311 4756 21865 43816;43817 35249;35250 35249 2 9606 Homo sapiens -0.05527378047872844 RPPQECCSPELGRR Unmodified 1740.8148 0.81480555 4756 Q9Y6C2 EMILIN1 EMILIN-1 yes yes 0 0 2 7 0 1 29.71 29.817 4 2.7827E-09 5345 20230619_1887_Aki_TMTPro18x_K_F7 167.55 142.5 11957 12047 13117 12479 16526 14756 15010 16957 13574 17274 23017 30459 22456 15586 31413 25202 25827 23592 11081 11028 13272 12609 16817 14814 15193 17177 14296 17812 23220 29803 23329 17074 31442 25102 24750 22433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17008000 23312 4756 21866 43818 35251 35251 1 9606 Homo sapiens -0.02596926345177053 RPPSAATTCDPVVEEHFR Unmodified 2067.9796 0.97962227 794 Q0H0I7;E7EWF5;G5E9M9;A0A075B6E4;A0A0A6YYI5;G5E9M7;Q14135-5;Q14135-6;Q14135-2;Q14135;Q14135-4 VGLL4 Transcription cofactor vestigial-like protein 4 yes no 0 0 1 4 0 1 39.181 39.224 4 7.0991E-07 9228 20230619_1883_Aki_TMTPro18x_K_F4 115.98 105.34 24773 21176 25502 25840 34873 39502 27126 27110 39862 32054 32337 30640 27559 28652 31007 30244 29095 35329 22919 19423 25986 25881 35306 38622 28189 28674 39576 32123 33315 31098 28479 29693 31363 30656 27899 33479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48647000 23313 794 21867 43819 35252 35252 1 9606 Homo sapiens -0.011648357244212093 RPPSAFFLFCSEHRPK Unmodified 1974.9887 0.98867081 4068;3509 Q5U071;D6R9A6;P26583 HMGB2 High mobility group protein B2 no no 0 0 2 7 0 1 47.491 47.579 5 0.00085324 12468 20230619_1887_Aki_TMTPro18x_K_F7 81.317 67.586 240250 251100 283640 289920 132450 173330 220250 170780 175480 224200 180420 234200 229290 162350 188600 244980 252290 280680 222870 230040 282280 288170 151840 184150 215790 176510 181790 223860 187430 234640 230390 174430 196330 246630 240970 266100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 419480000 23314 4068;3509 21868 43820 35253 35253 1 9606 Homo sapiens 0.040176024225729634 RPPSAFFLFCSEYRPK Unmodified 2000.9931 0.99308749 772 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;A0A286R9D9;B3KQ05 HMGB1 High mobility group protein B1 yes no 0 0 2 7.33 0.471 2 1 55.722 55.783 4;5 7.796E-06 16069 20230619_1888_Aki_TMTPro18x_K_F8 113.29 101.37 548570 563550 612010 522220 250850 387880 436220 301900 641320 520960 358580 461380 521250 472230 525710 689250 492810 599170 508540 515360 610470 529660 295210 400800 435440 321000 630430 513590 389180 471300 527410 498050 533650 683570 472570 569660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1763899999.9999998 23315 772 21869 43821;43822;43823 35254;35255 35255 2 9606 Homo sapiens 0.03263066845488538 RPPSGFFLFCSEFRPK Unmodified 1970.9825 0.9825228 3240 O15347;E9PES6;E7ES08;E7EQU1 HMGB3 High mobility group protein B3 yes no 0 0 2 7.5 0.5 1 1 57.615 57.668 4 9.6565E-08 16841 20230619_1888_Aki_TMTPro18x_K_F8 108.96 93.199 231630 206780 210320 191860 109690 143010 167820 127910 255910 187940 139890 153890 197910 190550 194000 227660 187130 206640 214140 189190 213780 194570 123860 148140 168520 133560 250990 185980 151660 159010 200180 197220 197150 226910 179240 196420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 429720000 23316 3240 21870 43824;43825 35256 35256 1 9606 Homo sapiens 0.035870841910764284 RPPTAGSQFK Unmodified 1087.5774 0.57744226 2174 E9PDF6;B0I1S9;O43795-2;O43795 MYO1B Unconventional myosin-Ib yes no 0 0 1 3 0 1 36.41 36.465 3 0.0037845 8155 20230619_1882_Aki_TMTPro18x_K_F3 75.115 27.513 101300 82524 86548 99184 141210 157060 126880 127320 181860 30038 33335 35484 33241 30505 65579 32256 41400 37801 93553 75696 90060 99517 142120 153700 130290 129500 175750 36060 41268 35689 35542 31719 64593 32806 39820 35858 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81352000 23317 2174 21871 43826 35257 35257 1 9606 Homo sapiens 0.03715663566094918 RPQGESYDQAIR Unmodified 1418.6902 0.69024019 4147 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 1 4 0 1 32.977 33.034 3 0.00017591 6728 20230619_1883_Aki_TMTPro18x_K_F4 91.024 38.096 25570 18046 28312 33116 40752 41131 31160 35655 39369 33999 47171 46815 38104 38805 40591 29878 48751 42934 23645 16648 28740 32273 41064 40841 32248 36752 39923 34849 47632 46655 39340 39801 41618 30943 46526 40662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29104000 23318 4147 21872 43827 35258 35258 1 9606 Homo sapiens -0.0023573249852688605 RPQIDPAVEGFIR Unmodified 1496.81 0.80996139 821 X6RCC3;A0A087WV97;Q8WU79-3;Q8WU79-2;Q8WU79 SMAP2 Stromal membrane-associated protein 2 yes no 0 0 1 8 0 1 49.929 50.002 3 0.0017463 13500 20230619_1888_Aki_TMTPro18x_K_F8 78.69 63.357 100880 75625 89714 92226 83434 106020 103700 92206 123290 93469 95374 97550 112010 88841 95519 116750 107410 110290 93151 69400 92007 91958 87864 105810 103950 95229 123290 94604 99907 98598 112990 93425 98195 116450 102680 104810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70790000 23319 821 21873 43828 35259 35259 1 9606 Homo sapiens 0.08142880846025946 RPQPTPTAVR Unmodified 1121.6305 0.63054046 2480 B4DGD9;Q96SI1 KCTD15 BTB/POZ domain-containing protein KCTD15 yes no 0 0 1 2 0 1 27.589 27.666 3 0.064542 4890 20230619_1881_Aki_TMTPro18x_K_F2 38.634 17.732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23320 2480 21874 43829 35260 35260 1 9606 Homo sapiens 0.074590413487158 RPQPYPYPSK Unmodified 1231.635 0.63495714 4510 Q9H3N1;B4DZX7 TMX1;TXNDC Thioredoxin-related transmembrane protein 1 yes no 0 0 1 3.5 0.5 1 1 39.114 39.163 3 6.4235E-05 9195 20230619_1883_Aki_TMTPro18x_K_F4 119.27 81.849 142770 104290 134180 151180 155130 206490 167170 158170 212450 159220 178540 161810 161450 135600 172390 199200 216290 151940 131860 95897 137500 149430 160170 203340 169190 164960 212310 161100 183940 163440 165910 144020 177660 196450 206080 145050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127100000 23321 4510 21875 43830;43831 35261 35261 1 9606 Homo sapiens 0.028405057716327065 RPQSADAYMTR Unmodified 1294.6088 0.60881874 3340 O94967-2;O94967;O94967-3;O94967-4;B4DHA1 WDR47 WD repeat-containing protein 47 yes no 0 0 1 8 0 1 32.942 32.942 3 8.6675E-05 6694 20230619_1888_Aki_TMTPro18x_K_F8 123.64 83.05 22731 18121 22247 25476 25620 30034 21143 26812 30698 22595 25142 24035 27849 24075 25764 28163 33976 27721 21012 16650 22707 25170 26260 29937 21890 27486 30493 23126 26166 24358 28254 25046 26698 28206 32385 26357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15310000 23322 3340 21876 43832 35262 35262 1 9606 Homo sapiens -0.026701314621504935 RPQTDQAVEFFIR Unmodified 1605.8263 0.82633974 2022 B2RDK5;A8K333;Q8IYB5-3;Q8IYB5-2;Q8IYB5;A0A087X1X9 SMAP1 Stromal membrane-associated protein 1 yes no 0 0 1 8 0 1 51.639 51.716 3 5.0757E-06 14268 20230619_1888_Aki_TMTPro18x_K_F8 100.56 76.708 87444 72775 82734 87710 80569 99061 90991 91300 103770 96376 104390 106910 104910 86454 98195 98812 106330 119870 80829 66749 84446 87504 84240 99111 91556 93951 104990 97458 107110 107340 106720 90553 100430 100270 101760 113580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145530000 23323 2022 21877 43833 35263 35263 1 9606 Homo sapiens 0.04765962012106684 RPQYSNPPVQGEVMEGADNQGAGEQGR Oxidation (M) 2886.2951 0.29509576 3745 P67809;H0Y449;A0JLU4;Q6PKI6;Q2VIK8;Q7KZ24;C9J5V9 YBX1 Nuclease-sensitive element-binding protein 1 yes no 0 1 1 2.5 0.5 1 1 37.6 37.657 3 1.5859E-07 8628 20230619_1882_Aki_TMTPro18x_K_F3 99.836 96.026 3791.8 2610.6 2555.5 5180.1 5217.1 4861 3879.5 4217.1 4132.1 6484.1 5880.7 5883.6 5189.3 3139 5226.8 6497.5 4955.4 5727.3 3493.2 2411.5 2753.2 5006 5168.7 4923.8 3997.5 4413.7 4277.8 6406.2 5921.3 5905.6 5309.8 3511.3 5307.1 6427.3 4749.3 5445.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64163000 23324 3745 21878 43834;43835 35264 35264 2419 1 9606 Homo sapiens -0.07259998245035604 RPQYSNPPVQGEVMEGADNQGAGEQGR Unmodified 2870.3002 0.30018114 3745 P67809;H0Y449;A0JLU4;Q6PKI6;Q2VIK8;Q7KZ24;C9J5V9 YBX1 Nuclease-sensitive element-binding protein 1 yes no 0 0 1 3.67 0.471 1 2 40.986 41.034 3;4 1.049E-38 10044 20230619_1882_Aki_TMTPro18x_K_F3 203.06 196.03 33153 19994 30775 36444 22785 39273 41615 32215 42038 48965 39340 46995 50413 41297 35751 51501 48974 53170 30580 18457 31401 35356 24879 39251 40852 33877 42624 48528 41017 47564 50407 43342 37409 51634 46759 50459 3 4 3 3 3 3 4 4 3 4 4 4 4 4 3 4 3 3 380730000 23325 3745 21878 43836;43837;43838 35265;35266;35267;35268 35265 4 9606 Homo sapiens -0.0601569438244951 RPQYSNPPVQGEVMEGADNQGAGEQGRPVR Oxidation (M) 3238.5174 0.51738456 3745 P67809;H0Y449;A0JLU4;Q6PKI6;Q2VIK8;Q7KZ24;C9J5V9 YBX1 Nuclease-sensitive element-binding protein 1 yes no 0 1 2 4 0.816 1 1 1 36.434 36.498 4 7.853600000000001E-30 8087 20230619_1883_Aki_TMTPro18x_K_F4 175.86 162.13 183620 171610 171320 205610 195440 169140 203060 207440 183050 235260 223710 224810 233490 217790 241740 299220 228310 253130 169850 157330 175570 204410 200860 174850 203760 210050 189540 235800 228140 228600 238480 229050 245270 296630 218750 240820 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 1054999999.9999999 23326 3745 21879 43839;43840;43841 35269;35270;35271;35272;35273;35274;35275 35270 2419 7 9606 Homo sapiens -0.01233343899684769 RPQYSNPPVQGEVMEGADNQGAGEQGRPVR Unmodified 3222.5225 0.52246994 3745 P67809;H0Y449;A0JLU4;Q6PKI6;Q2VIK8;Q7KZ24;C9J5V9 YBX1 Nuclease-sensitive element-binding protein 1 yes no 0 0 2 4.5 0.5 1 1 39.357 39.424 4 3.6437E-86 9264 20230619_1885_Aki_TMTPro18x_K_F5 306.47 296.14 468310 397380 422620 427950 404860 462020 438340 475030 425820 614730 515440 523030 683410 528190 519530 689800 620140 610230 432780 364070 432860 430370 422960 465060 440000 487900 439290 610620 531960 535370 684040 553460 537660 685630 592300 580480 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3062999999.9999995 23327 3745 21879 43842;43843 35276;35277;35278;35279 35279 4 9606 Homo sapiens 0.00010959962901324616 RPRDDEEEEQK Unmodified 1429.6433 0.64334957 814 A0A087WUB9;Q8WYA6 CTNNBL1 Beta-catenin-like protein 1 yes no 0 0 2 1 0 1 27.827 27.827 4 1.7839E-06 5148 20230619_1880_Aki_TMTPro18x_K_F1 161.93 128.52 13428 5218.7 23520 22596 32292 33575 23321 30400 21300 13552 25814 29286 15649 20601 25396 7820.9 27691 25086 12453 4928.5 23175 21498 32555 33004 24005 30806 21953 15075 25870 28698 16806 20841 25679 9092.7 26454 23653 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13944000 23328 814 21880 43844 35280 35280 1 9606 Homo sapiens -0.05428636840360923 RPSAPVDFSK Unmodified 1102.5771 0.57710791 3899 Q14696 MESDC2 LDLR chaperone MESD yes yes 0 0 1 1.5 0.5 1 1 41.82 41.858 3 0.0015512 10911 20230619_1880_Aki_TMTPro18x_K_F1 87.719 39.118 417490 317860 362960 411610 437040 511190 416280 453560 517080 463160 529350 526480 504620 426180 474310 556920 594620 552390 385450 291860 374660 409150 448070 507900 424170 467460 521380 469580 541400 528410 514480 449790 489930 557050 567470 524870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 435250000 23329 3899 21881 43845;43846 35281;35282 35281 2 9606 Homo sapiens 0.029922438462335776 RPSEEDFR Unmodified 1034.4781 0.47812215 4210 Q8IXT5;B9ZVT1 RBM12B RNA-binding protein 12B yes no 0 0 1 2.5 0.5 1 1 31.361 31.435 3 0.0032818 6288 20230619_1881_Aki_TMTPro18x_K_F2 92.051 50.175 74607 54180 55905 76813 84209 85071 73169 79290 96455 83616 93118 91395 88536 83360 76856 97517 97435 94023 68795 49807 58885 75763 84961 85264 75126 81508 96785 84545 95462 92189 90028 86953 79608 97518 93002 89353 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72591000 23330 4210 21882 43847;43848 35283 35283 1 9606 Homo sapiens -0.03773779118660059 RPSENLGQVLFGER Unmodified 1600.8322 0.8321534 9 B3KSG9;A0A024QYR8;Q99805 TM9SF2 Transmembrane 9 superfamily member 2 yes no 0 0 1 4.5 3.5 1 1 51.166 51.204 3 1.6994E-16 14034 20230619_1888_Aki_TMTPro18x_K_F8 166.59 149.39 285130 221680 255890 313390 258860 292590 308950 299440 369300 323310 338240 335220 353890 309040 299610 436170 413230 424310 263350 203730 262800 308550 270180 297520 310420 306200 371430 325940 349110 339160 358330 326320 312660 435140 394360 403100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 714580000 23331 9 21883 43849;43850 35284;35285 35285 2 9606 Homo sapiens 0.0557706052377398 RPSGTGTGPEDGRPSLGSPYGQPPR Unmodified 2522.2262 0.22621156 3618 P50479;A0A0S2Z4P0;A0A0S2Z4N4;P50479-2;C9J542 PDLIM4 PDZ and LIM domain protein 4 yes no 0 0 2 4.5 3.5 1 1 37.005 36.997 4 2.0778E-34 8766 20230619_1880_Aki_TMTPro18x_K_F1 195.7 181.24 68302 56531 67675 63222 46752 49595 58908 55797 61395 84859 92833 91279 114000 84385 84621 108810 102070 92259 63157 51815 68444 63168 50523 51368 58835 57385 63753 84354 94655 92177 114180 88591 87656 107960 97426 87839 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129310000 23332 3618 21884 43851;43852 35286;35287 35286 2 9606 Homo sapiens 0.025987503081523755 RPSNSTPPPTQLSK Unmodified 1508.7947 0.79470526 743 B4DSD7;E9PFR3;A0A024RD11;Q14738;A8K6Y2;Q14738-2 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes no 0 0 1 3 0 1 36.587 36.642 3 3.7834E-05 8206 20230619_1882_Aki_TMTPro18x_K_F3 107.46 81.415 89437 57300 73145 81020 95565 100730 81357 93484 120850 97373 102480 106480 108730 95603 91292 108040 128780 115110 82463 52703 76026 80099 97195 100180 84087 96060 120110 98537 106280 107310 110020 99627 95290 108720 122760 109310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48064000 23333 743 21885 43853 35288;35289 35288 2 9606 Homo sapiens 0.060659692581793934 RPSPDEPMTNLELK Oxidation (M) 1641.8032 0.80322103 228 A0A024R394;Q9UHD1;A0A024R3C3;Q9UHD1-2;E9PPQ5 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes no 0 1 1 4.5 0.5 1 1 43.316 43.378 3 0.015895 10958 20230619_1885_Aki_TMTPro18x_K_F5 82.822 55.14 89063 75749 90095 103510 102670 106150 101360 99486 122110 120710 129600 113820 131490 94669 101090 124460 121360 123280 82382 69563 91696 102250 105580 106990 102930 102680 123540 120650 132550 115270 132580 99952 104580 124460 115940 117100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 231660000 23334 228 21886 43854;43855 35290 35290 139 1 9606 Homo sapiens 0.007991551125087426 RPSPGEMR Unmodified 928.45488 0.45488428 722 A0A1U9X8D3;A0A1U9X8D1;A0A1U9X8C7;A0A1U9X8C1;A0A0G2JHC2;A0A024RCJ8;Q6NYC8;Q6NYC8-3;Q6NYC8-2 hCG_1821276;PPP1R18 Phostensin yes no 0 0 1 5.5 0.5 1 1 26.903 26.936 3 0.043574 4653 20230619_1885_Aki_TMTPro18x_K_F5 53.166 27.43 9905.8 6282.7 9412.6 10402 12065 14798 10854 12891 14942 7243 10931 8697.4 11826 9599.4 10049 9565 11683 7819.2 9143 5790.3 9650 10215 12311 14573 11142 13143 14801 7684.9 11426 8813.4 11957 9868.3 10335 9519.8 11136 7459.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6304900 23335 722 21887 43856;43857 35291;35292 35291 2 9606 Homo sapiens -0.01220496436974372 RPSQEQSASASSGQPQAPLNR Unmodified 2195.0679 0.067920004 4059 Q5T1M5;A0A8I5QJ94;Q5T1M5-2;A0A8I5QJL3;A0A8I5KX71;B4DVS2 FKBP15 FK506-binding protein 15 yes no 0 0 1 6.5 0.5 1 1 31.667 31.733 3 5.7159E-37 5990 20230619_1887_Aki_TMTPro18x_K_F7 229.46 205.45 11152 7180.5 7781.3 9084.6 14229 12530 11415 11606 12665 9293.2 12271 17371 13678 11779 12718 15911 15427 15881 10273 6596.3 8285.8 9061 14179 12394 11707 11860 12808 9763.3 12706 17073 13875 12544 13117 15912 14737 15082 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26041000 23336 4059 21888 43858;43859 35293;35294 35294 2 9606 Homo sapiens 0.018188761198416614 RPSRPSNSNISK Unmodified 1341.7113 0.71130998 4116 Q6P158;B4DKW2;Q6P158-2 DHX57 Putative ATP-dependent RNA helicase DHX57 yes no 0 0 2 5.5 0.5 1 1 28.984 29.036 4 0.034194 5442 20230619_1886_Aki_TMTPro18x_K_F6 60.161 22.817 46966 26746 46757 51346 62709 62084 56335 64293 70184 33245 40928 31629 36247 28401 44278 28458 50429 26640 43344 24716 47774 49932 63666 61978 57593 64669 69425 35271 43119 32127 37532 29417 45123 28555 48026 25409 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21540000 23337 4116 21889 43860;43861 35295;35296 35296 2 9606 Homo sapiens 0.054122776009762674 RPSSGISEALISENENK Unmodified 1829.9119 0.91191986 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;H0Y9Y3;Q9UMS6;Q9UMS6-3 SYNPO2 Synaptopodin-2 yes no 0 0 1 4.5 0.5 1 1 45.75 45.811 3 2.335E-13 12014 20230619_1885_Aki_TMTPro18x_K_F5 151.48 132.89 49141 39748 45979 53190 49787 61467 67767 67732 74424 81046 65216 61864 81471 59243 64310 103970 95048 82555 45412 36500 47097 52713 51947 61641 67463 69083 75150 80594 68026 63658 81799 63597 67608 102420 90558 78684 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 301570000 23338 4686 21890 43862;43863 35297 35297 1 9606 Homo sapiens 0.03016037616498579 RPSSTSVPLGDK Unmodified 1242.6568 0.65681479 4622 Q9NXR1-1;Q9NXR1;X5DR54;I3L533;I3L2R9;I3L2T8 NDE1 Nuclear distribution protein nudE homolog 1 yes no 0 0 1 8 0 1 38.374 38.359 3 0.0062739 8820 20230619_1888_Aki_TMTPro18x_K_F8 63.76 27.457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23339 4622 21891 43864 35298 35298 1 9606 Homo sapiens 0.04519265729572908 RPSTSEVNNVNPK Unmodified 1440.7321 0.732105 362 H0YL38;B4DHL1;A0A024R5W1;Q6N043-2;Q6N043;Q9H740;H0YLA6;A8K124;Q6N043-3 ZNF280D;SUHW4 Zinc finger protein 280D yes no 0 0 1 7 0 1 35.239 35.311 3 0.00069522 7431 20230619_1887_Aki_TMTPro18x_K_F7 89.959 47.403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23340 362 21892 43865 35299 35299 1 9606 Homo sapiens 0.029368231899752573 RPSTSQTVSTPAPVPVIESTEAIEAK Unmodified 2694.4076 0.40758955 3440 P12270;P12270-2;Q58F23;Q504U6;A0PJC9 TPR Nucleoprotein TPR yes no 0 0 1 6.67 0.471 1 2 53.906 53.978 3;4 3.6935E-14 15355 20230619_1887_Aki_TMTPro18x_K_F7 124.66 110.35 52579 44837 41370 54450 47112 52270 55099 51868 63047 67136 59237 65044 74408 63189 54333 75514 73916 83927 48546 41124 43128 54157 48731 53021 55317 53442 63685 66971 61642 66046 74527 65918 56802 76088 70602 79588 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 553790000 23341 3440 21893 43866;43867;43868 35300;35301 35301 2 9606 Homo sapiens 0.12816205770832312 RPSTYGIPR Unmodified 1045.5669 0.56687757 2144;1327 A0A1W6S962;A0A8F9S2Z6;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;A0A494C0Q7 GTF2I General transcription factor II-I no no 0 0 1 4 0.816 1 1 1 34.206 34.273 3 0.00087826 7215 20230619_1883_Aki_TMTPro18x_K_F4 95.573 56.425 233660 228570 227340 232820 253230 309760 245280 287700 292500 210690 236820 224600 262870 203430 254810 268470 308440 273510 216280 209210 231910 235910 261090 306880 249350 293200 292870 217620 246690 226920 267050 214090 262260 268970 294350 259860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 176450000 23342 1327;2144 21894 43869;43870;43871 35302;35303;35304 35303 3 9606 Homo sapiens 0.04591680911653384 RPTCVIMVK Unmodified 1102.5991 0.59910568 4617 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 yes yes 0 0 1 5 0 1 43.028 43.109 3 0.024389 10790 20230619_1885_Aki_TMTPro18x_K_F5 63.216 27.564 152120 115370 136760 135340 158830 197010 163980 169970 291810 92887 84338 90937 109860 94635 131500 120960 127590 115390 140480 105830 140560 135870 163840 193840 168790 173390 281150 98418 97492 92647 112470 98883 133060 120850 122030 109700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68021000 23343 4617 21895 43872 35305 35305 1 9606 Homo sapiens 0.05191008998781399 RPTDYFAEMAK Unmodified 1327.6231 0.62307182 3090 Q6IB29;H7C2Q8;Q99848 EBNA1BP2 Probable rRNA-processing protein EBP2 yes no 0 0 1 7.5 0.5 1 1 51.238 51.315 3 0.00020484 14049 20230619_1888_Aki_TMTPro18x_K_F8 113.24 68.697 247480 206800 232120 243660 217710 276920 260790 261560 282190 275630 260260 238360 295320 241550 263870 288940 268260 257160 228750 189630 236980 243520 228750 277080 261150 268610 285480 276720 269460 243900 298720 251610 269250 287780 256550 244630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237310000 23344 3090 21896 43873;43874 35306 35306 1 9606 Homo sapiens -0.027634790338424864 RPTEICADPQFIIGGATR Unmodified 2001.0102 0.010194116 4021 Q59EF6;B2RCM3;P17655 CAPN2 Calpain-2 catalytic subunit yes no 0 0 1 1 0 1 51.716 51.716 3 3.0973E-24 15003 20230619_1880_Aki_TMTPro18x_K_F1 212.85 191.75 46363 35680 41344 46861 39508 45899 50278 54595 56150 56107 58714 55513 65933 58481 62614 70502 65775 77777 42816 32764 42430 46396 41502 46672 50266 55198 56978 56601 60424 56531 66922 60872 63951 71033 62986 73751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186210000 23345 4021 21897 43875 35307 35307 1 9606 Homo sapiens 0.04972942660629087 RPTELLSNPQFIVDGATR Unmodified 2013.0643 0.064338176 326 A0A024R5A3;A0A024R580;B2RDI5;P07384;E9PLX0;E9PJJ3;E9PLC9;E9PMC6;E9PJA6;E9PSA6;E9PQB3;E9PRM1 CAPN1 Calpain-1 catalytic subunit yes no 0 0 1 1.5 0.5 1 1 54.982 54.992 3 1.4717E-13 16411 20230619_1880_Aki_TMTPro18x_K_F1 147.84 134.18 40896 40203 48781 44482 47764 57248 52181 56820 54480 59529 53894 43259 50414 39924 64620 44951 46964 40477 37924 36824 48865 44767 49819 56907 52456 58105 55389 59505 55136 44550 52194 41584 64374 44913 45060 38516 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 312350000 23346 326 21898 43876;43877 35308 35308 1 9606 Homo sapiens 0.09832858083836982 RPTPQDSPIFLPVDDTSFR Unmodified 2187.096 0.096032235 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 1 6.5 0.5 1 1 57.298 57.361 3 1.1684E-19 16924 20230619_1886_Aki_TMTPro18x_K_F6 183.65 166.96 124500 126460 118970 130080 91088 95833 105060 119330 109570 155680 152140 169030 147770 151380 132810 189880 160090 160990 115260 115750 120930 130720 97163 100150 105420 121270 113260 155670 154010 170370 150430 158590 137140 188420 152910 153210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 376070000 23347 3606 21899 43878;43879 35309 35309 1 9606 Homo sapiens 0.04996806047165592 RPTVSSDLENIDTGVNSK Unmodified 1930.9596 0.95959833 3061 H1UBN3;Q7Z4Z4;Q5U0M0;Q53HG9;O95067 CCNB2V;CCNB2 G2/mitotic-specific cyclin-B2 yes no 0 0 1 5 0 1 47.141 47.217 3 1.2119E-09 12562 20230619_1885_Aki_TMTPro18x_K_F5 135.27 119.13 29110 23142 23869 27760 18432 28337 23792 23643 29232 39815 35319 32586 39204 33273 32657 42452 35112 35360 26872 21229 24632 27657 19805 28490 23861 24911 29768 39145 36096 33438 39574 34782 33514 42089 33573 33659 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33481000 23348 3061 21900 43880 35310 35310 1 9606 Homo sapiens 0.03135691816646613 RPTWAEER Unmodified 1043.5148 0.514842 4248 Q8ND56-3;Q8ND56-2;Q8ND56;A0A140TA76;A0A0G2JQ95;A0A096LP11 LSM14A Protein LSM14 homolog A yes no 0 0 1 4.5 0.5 1 1 33.218 33.288 3 0.050109 6942 20230619_1885_Aki_TMTPro18x_K_F5 50.034 29.704 25696 20281 31894 33322 43756 39353 37095 38672 34397 31379 37141 38685 34630 33524 36220 23157 36567 34646 23803 18672 32060 32641 44229 39323 37717 39356 35304 32322 37891 38737 35520 34198 36747 24132 34970 32792 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75078000 23349 4248 21901 43881;43882 35311 35311 1 9606 Homo sapiens -0.005174825021185825 RPVFPPLCGDGLLSGK Unmodified 1711.908 0.90796088 2253 Q9NRX1;B2R823;F8WBJ6 PNO1 RNA-binding protein PNO1 yes no 0 0 1 4 0 1 58.212 58.215 3 5.8398E-08 17610 20230619_1883_Aki_TMTPro18x_K_F4 123.4 102.56 73537 59689 59295 77313 65259 82175 71836 71003 85523 79081 61359 70629 91508 80692 60978 116350 105680 107360 67885 54792 61629 76651 67625 82439 72450 73538 85454 79282 65450 72482 91080 84779 65316 115660 100700 102060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54862000 23350 2253 21902 43883 35312 35312 1 9606 Homo sapiens 0.08048321379715162 RPVGGFLLDGFQGNPTTLEAR Unmodified 2244.1651 0.16511485 4535 Q9H974-2;Q9H974-3;Q9H974;Q9H974-4 QTRTD1 Queuine tRNA-ribosyltransferase subunit QTRTD1 yes no 0 0 1 2.5 0.5 1 1 58.946 58.967 3 3.9243E-45 18192 20230619_1881_Aki_TMTPro18x_K_F2 250.86 222.9 97534 81138 92926 90695 86445 108440 89397 101120 97359 107550 118970 114460 119270 97291 113330 134180 120220 129760 90161 74367 94674 91079 90504 108130 90307 103940 99639 108530 121040 115380 121400 102880 115850 133930 115020 123260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 77721000 23351 4535 21903 43884;43885 35313;35314;35315 35313 3 9606 Homo sapiens 0.09279890066773078 RPVHGESDTEQLQDDDIETTK Unmodified 2412.1041 0.10409032 3143 J3QL54;Q9BW27-3;Q9BW27;J3KT10;F5H0W7;B3KW81;J3KS87 NUP85 Nuclear pore complex protein Nup85 yes no 0 0 1 2 0 1 39.171 39.237 4 6.0691E-08 9463 20230619_1881_Aki_TMTPro18x_K_F2 108.17 99.462 16486 12379 16024 17317 20007 22365 19922 19807 24837 22687 25595 26458 26073 21514 21885 28231 28646 33346 15233 11377 16385 17142 20474 22168 20241 20486 25049 22894 26246 26527 26398 22721 22738 28524 27375 31601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69831000 23352 3143 21904 43886 35316 35316 1 9606 Homo sapiens -0.045477562846372166 RPVLGLECPQSEVSGAR Unmodified 1853.9418 0.9417802 641 D6RA78;A0A024RAZ8;Q53HV7 SMUG1 Single-strand selective monofunctional uracil DNA glycosylase yes no 0 0 1 7 0 1 43.693 43.772 3 1.4466E-18 10823 20230619_1887_Aki_TMTPro18x_K_F7 184.31 172.87 36333 32905 32122 33750 36225 36884 36359 36671 44836 42539 40449 43296 44396 34734 42925 47674 43420 45630 33586 30127 33047 34076 37304 37082 36915 37632 45036 42701 41904 43624 45097 36807 43729 47571 41555 43353 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29348000 23353 641 21905 43887 35317 35317 1 9606 Homo sapiens 0.048966980807790605 RPVSAMFIFSEEK Unmodified 1539.7755 0.77554972 2929 E9PKP7;P17480-2;P17480;A0A994J4N4;A8K962;B4DNQ1;O00164;B4DLB0 UBTF Nucleolar transcription factor 1 yes no 0 0 1 2 0 1 56.772 56.788 3 3.5974E-06 17293 20230619_1881_Aki_TMTPro18x_K_F2 133.66 96.548 83356 60243 74999 82883 68677 93098 80499 81806 115480 69391 66495 77959 84754 76188 87791 86655 78318 85338 76957 55363 76853 81945 72377 93038 81536 84037 113580 71175 71429 78695 86108 79176 88690 86853 75074 81043 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127300000 23354 2929 21906 43888 35318 35318 1 9606 Homo sapiens 0.027252966429159642 RPYAPINANAIK Unmodified 1326.7408 0.74081919 317 A0A024R534;O94776;O94776-2 MTA2 Metastasis-associated protein MTA2 yes no 0 0 1 4.5 0.5 1 1 43.88 43.941 3 1.002E-05 11254 20230619_1883_Aki_TMTPro18x_K_F4 136.81 99.462 121150 102670 103700 113510 155850 194180 147690 129690 200050 56554 73518 61086 64307 47771 76115 60506 63495 58122 111920 94087 107680 114760 157840 188690 150800 135020 195300 61566 80918 61483 66489 50414 76407 60520 60837 55250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138800000 23355 317 21907 43889;43890 35319 35319 1 9606 Homo sapiens 0.09051841617110767 RPYDLDR Unmodified 933.46683 0.46682918 2020;3876 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959;K7EII0;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 1 4 0.816 1 1 1 32.611 32.681 3 0.0093513 6577 20230619_1883_Aki_TMTPro18x_K_F4 91.069 30.387 205200 157570 194730 215880 282260 306770 257520 262210 319160 179550 220980 211620 186870 172350 223130 199460 235450 182840 189590 144760 200140 214300 285670 302210 262870 268690 317250 187150 229870 212190 193690 180380 226780 199190 224790 174030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144890000 23356 2020;3876 21908 43891;43892;43893 35320;35321 35320 2 9606 Homo sapiens -0.0025655642216406704 RPYDLDRR Unmodified 1089.5679 0.56794021 2020;3876 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959;K7EII0;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 2 8 0 1 29.143 29.164 3 0.035949 5348 20230619_1888_Aki_TMTPro18x_K_F8 72.879 1.1873 34987 25783 29502 30039 55319 55884 45537 41794 58650 14228 13987 14659 11764 13557 23740 14702 15891 11502 32290 23652 30816 30317 55149 54229 46818 42924 57097 15972 16386 14847 12689 14058 23445 14610 15250 10975 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41750000 23357 2020;3876 21909 43894 35322 35322 1 9606 Homo sapiens 0.026738952805544614 RPYFTVDEAEAR Unmodified 1452.6997 0.69974224 3923 Q15223;Q6SYC1 PVRL1 Nectin-1 yes no 0 0 1 4 0 1 42.741 42.784 3 0.0015522 10737 20230619_1883_Aki_TMTPro18x_K_F4 73.022 52.916 96209 77489 90669 88665 96874 101620 98242 98727 117430 103230 115140 123520 129210 105990 105830 132310 127270 123400 88911 71047 92636 88832 100170 101750 99589 101180 118430 104730 118890 123910 130310 111280 109350 131970 121540 117310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87629000 23358 3923 21910 43895 35323 35323 1 9606 Homo sapiens -0.008499642130118445 RPYNSYILK Unmodified 1152.6291 0.62914348 4787 yes yes 0 0 1 3 0 1 51.448 51.513 3 0.00063766 14826 20230619_1882_Aki_TMTPro18x_K_F3 101.11 16.935 + 371900 392060 350530 315150 448880 553950 403280 387120 525690 93230 95604 74487 85906 71598 200650 88911 94198 64866 344340 358140 359190 328060 457990 538320 412680 399080 510110 110400 118020 76724 93558 74853 195510 88101 90954 61972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184290000 23359 4787 21911 43896 35324 35324 1 9606 Homo sapiens 0.058934072599640785 RPYWCISR Unmodified 1136.5549 0.55493268 2081 A8K5W7;Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 1 6.5 0.5 1 1 41.494 41.577 3 0.0072232 9929 20230619_1887_Aki_TMTPro18x_K_F7 78.113 53.821 86406 77438 81388 92603 99153 105640 105410 101360 126300 50699 45766 38366 41793 40096 61536 52540 56925 30069 79907 71002 83435 92442 101760 105740 106480 102510 124040 53728 50573 39653 43797 41913 61912 51384 54324 28896 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44463000 23360 2081 21912 43897;43898 35325 35325 1 9606 Homo sapiens -0.007882591032057462 RQADPGFFCR Unmodified 1252.5771 0.57712468 3920 Q6FGV9;Q15126 PMVK Phosphomevalonate kinase yes no 0 0 1 2 0 1 38.768 38.834 3 2.4267E-05 9262 20230619_1881_Aki_TMTPro18x_K_F2 136.52 107.72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23361 3920 21913 43899 35326 35326 1 9606 Homo sapiens -0.03906079425428288 RQAELLEK Unmodified 985.55564 0.55564418 2119;421 A0A994J591;C9J2M4;P78362-2;P78362;A0A024R704;H7C5L6;D6RBF8;A8K8B2;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3;A0A024RCU9 SRPK2;SRPK1 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal;SRSF protein kinase 1 no no 0 0 1 5.5 0.5 1 1 39.484 39.573 3 0.008643 9353 20230619_1886_Aki_TMTPro18x_K_F6 83.309 32.196 859520 579060 770450 802200 816300 844500 803370 816540 957780 972700 1006800 890490 1083500 843670 779020 1194000 1177200 963200 793220 532360 790780 792240 843930 850140 815840 840230 969340 972250 1032800 907110 1088800 890420 821710 1180100 1121000 918080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 369200000 23362 421;2119 21914 43900;43901 35327;35328 35327 2 9606 Homo sapiens 0.06228858817530636 RQAEQLSAAGEGGDAGR Unmodified 1671.7925 0.79247343 2253 Q9NRX1;B2R823;F8WBJ6 PNO1 RNA-binding protein PNO1 yes no 0 0 1 2.5 0.5 1 1 31.834 31.904 3 4.5389999999999997E-60 6315 20230619_1882_Aki_TMTPro18x_K_F3 261.06 233.65 17853 14627 14776 19855 18762 22066 16093 17876 28379 17745 22371 23302 22928 17047 20857 30407 35231 28451 16485 13433 15355 19635 19147 22042 16758 18552 27938 18134 23260 23219 23293 18500 22088 30197 33523 27068 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80759000 23363 2253 21915 43902;43903 35329 35329 1 9606 Homo sapiens -0.016551112176102833 RQAEVELASR Unmodified 1157.6153 0.61528433 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 1 4 0.816 1 1 1 32.298 32.371 3 8.4008E-05 6462 20230619_1883_Aki_TMTPro18x_K_F4 134.98 101.02 59385 51990 54554 59265 85208 88926 97265 94675 121920 92290 102930 92304 108930 86564 85780 115830 113800 97783 54898 47651 56335 59663 86398 87812 98044 96205 121950 93461 106650 93617 109880 91030 89341 114830 108500 93125 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105120000 23364 3921 21916 43904;43905;43906 35330 35330 1 9606 Homo sapiens 0.04278129760905358 RQAHLCVLASNCDEPMYVK Unmodified 2290.0657 0.065676859 3501 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 1 4.5 3.5 1 1 45.978 45.997 4 1.3418E-19 11824 20230619_1888_Aki_TMTPro18x_K_F8 184.01 167.32 117340 84255 74903 99458 70673 106950 89521 110300 134460 132350 112500 134960 160490 125860 70201 166840 167390 158420 108100 77309 79734 99280 74683 107590 90579 112970 133650 132670 118560 136550 158030 132330 78862 166220 159160 150590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1120400000 23365 3501 21917 43907;43908 35331;35332 35332 2 9606 Homo sapiens -0.02775335205524243 RQAHLCVLASNCDEPMYVK Oxidation (M) 2306.0606 0.060591481 3501 P25398 RPS12 40S ribosomal protein S12 yes yes 0 1 1 7.5 0.5 1 1 43.25 43.295 4 4.343199999999999E-19 10772 20230619_1888_Aki_TMTPro18x_K_F8 171.56 156.47 205420 138830 149050 196480 155970 203140 175260 208410 221070 245650 208500 252530 260480 197660 124940 319780 283400 295340 189310 127660 156520 193660 162450 204890 177080 213450 222390 246370 216880 254170 257790 212230 139260 317370 269710 280730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 718220000 23366 3501 21917 43909;43910 35333;35334;35335 35335 2168 3 9606 Homo sapiens -0.040196390681558114 RQAMPFK Unmodified 876.46399 0.46399241 1898 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914;A8K3Q9 RPL14 60S ribosomal protein L14 yes no 0 0 1 5 0 1 39.248 39.339 3 0.015478 9252 20230619_1885_Aki_TMTPro18x_K_F5 76.035 35.006 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23367 1898 21918 43911 35336 35336 1 9606 Homo sapiens 0.02081896919344217 RQAQSPAGVSSEVEVLK Unmodified 1783.9428 0.94282606 1362 A0A2R8Y7R9;Q13136;Q13136-2;E9PJZ7 PPFIA1 Liprin-alpha-1 yes no 0 0 1 6 0 1 45.645 45.731 3 4.5656E-06 12023 20230619_1886_Aki_TMTPro18x_K_F6 99.021 71.686 48619 40547 49639 57157 58060 63870 66672 67741 76884 63075 60875 57264 65336 53394 55154 70035 64675 62502 44970 37251 50523 56429 59870 64144 67018 68797 77081 63840 63376 58305 66059 56091 56871 69647 61773 59452 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31650000 23368 1362 21919 43912 35337 35337 1 9606 Homo sapiens 0.08221235721384801 RQATDDATLLIVNR Unmodified 1584.8584 0.85836815 1116 O75150;O75150-4;A0A0S2Z537;A8K6K1;H3BP71;A0A0S2Z4Z2;Q6ZN99;O75150-3;H3BUL6;I3L332;H3BQ99 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 0 0 1 7 0 1 45.52 45.607 3 4.3562E-07 11577 20230619_1887_Aki_TMTPro18x_K_F7 138.19 114.95 365210 284250 369210 406200 379130 430300 420040 419920 471790 450180 477220 438230 495120 407810 435010 468680 479320 446810 337630 261260 375130 400380 394220 432910 422810 430540 477910 453040 489870 444560 501810 424940 446020 468740 457950 424730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 120740000 23369 1116 21920 43913 35338;35339 35339 2 9606 Homo sapiens 0.08933329695287284 RQAVDVSPLR Unmodified 1139.6411 0.64110515 300 M0R0F0;A0A024R4Q8;M0R0R2;P46782;Q53G25;M0QZN2 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 0 0 1 4.5 3.04 1 1 1 1 36.155 36.184 3 0.0001533 8433 20230619_1880_Aki_TMTPro18x_K_F1 124.1 63.585 445230 337880 354730 411860 436690 526610 470420 457560 604870 313510 329230 308970 298070 247280 375030 338510 353610 274800 410810 310050 369550 411260 448820 522050 476160 468380 596610 325030 349430 312060 308970 261850 378590 335290 337990 261970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 667480000 23370 300 21921 43914;43915;43916;43917 35340;35341 35340 2 9606 Homo sapiens 0.07687024003166698 RQAVDVSPLRR Unmodified 1295.7422 0.74221618 300 M0R0F0;A0A024R4Q8;M0R0R2;P46782;Q53G25;M0QZN2 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 0 0 2 4.5 0.5 1 1 32.133 32.203 3 0.0052303 6429 20230619_1883_Aki_TMTPro18x_K_F4 72.29 35.895 45625 37675 48769 45229 55900 60815 52554 55133 53379 48516 53821 52662 48148 44948 58505 49411 58506 52065 42215 34556 49363 45273 57385 60184 53232 56520 54343 49516 54974 53021 49841 46838 59256 49766 55934 49447 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41939000 23371 300 21922 43918;43919 35342;35343 35342 2 9606 Homo sapiens 0.10617475705862489 RQAVTNPNNTFYATK Unmodified 1723.8642 0.86418181 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z1V7;H0Y8K0;A0A3B3ITI4 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 1 4.5 0.5 1 1 41.041 41.106 3 7.6139E-08 9968 20230619_1883_Aki_TMTPro18x_K_F4 135.61 117.65 128910 111180 118920 113190 136010 141120 140420 136040 143600 152800 141480 131490 158460 124250 158390 156360 148060 142600 119160 101800 121850 114600 139970 140550 141430 139740 146160 152870 145980 134250 161090 130160 160480 155860 141730 135610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3851699999.9999995 23372 1488 21923 43920;43921 35344;35345 35344 2 9606 Homo sapiens 0.03120428206921133 RQCIEIIENR Unmodified 1329.6823 0.68231804 353 H9ZYI9;A0A024R5R5;B7Z726;A0A024R5X6;Q06547-4;Q06547-3;Q06547-2;Q06547;H0YMZ5;F5H7I4;B7Z8U2 GABPB1;GABPB2 GA-binding protein subunit beta-1 yes no 0 0 1 5.5 0.5 1 1 38.88 38.967 3 0.00057324 9081 20230619_1886_Aki_TMTPro18x_K_F6 102.4 78.245 38576 29895 41434 37424 36761 45730 42253 43329 56428 47920 47571 50585 46805 43537 44862 48883 50840 49026 35681 27438 41764 37297 38757 45541 42730 44543 56307 48285 49211 50975 47738 45406 46004 49040 48573 46570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52144000 23373 353 21924 43922;43923 35346 35346 1 9606 Homo sapiens 0.030664169803230834 RQDLEDSLQAQQYFADANEAESWMR Oxidation (M) 3016.3257 0.32572719 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 1 1 4 0.816 1 1 1 59.471 59.5 3 0.00026852 18235 20230619_1882_Aki_TMTPro18x_K_F3 87.958 85.327 16374 13677 14436 13922 18107 17591 18605 19574 18410 19491 20194 20601 21178 20102 19220 21265 22900 23272 15128 12525 14876 14102 18512 17567 18727 19847 18847 19732 20683 20848 21507 20808 19792 21459 21877 22081 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 30400000 23374 1022;3868 21925 43924;43925;43926 35347;35348 35348 592 2 9606 Homo sapiens -0.10178264650585334 RQDLIDEWIAK Unmodified 1385.7303 0.73031409 3351 O95251-2;O95251-4;O95251;B4DJ40;E7EUP3;B7Z4D9;B3KVJ2;O95251-3;O95251-5;B4DG18;B4DGH8 KAT7 Histone acetyltransferase KAT7;Histone acetyltransferase yes no 0 0 1 6.5 0.5 1 1 58.147 58.208 3 7.9493E-05 17094 20230619_1887_Aki_TMTPro18x_K_F7 125.54 87.521 47097 38946 45028 51324 40503 50415 49792 48717 57034 50927 47562 53640 56166 46409 52344 57273 61448 57370 43537 35755 45891 50791 42734 50991 49890 49964 57316 51444 49671 54072 56876 48691 53820 57372 58677 54504 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81819000 23375 3351 21926 43927;43928 35349 35349 1 9606 Homo sapiens 0.05287814172061189 RQDLLNVLAR Unmodified 1196.699 0.69895438 4319 Q96A33;Q96A33-2 CCDC47 Coiled-coil domain-containing protein 47 yes no 0 0 1 3.5 0.5 1 1 48.535 48.593 3 7.4458E-05 13499 20230619_1882_Aki_TMTPro18x_K_F3 136.48 91.783 403010 328080 362410 409670 391740 482910 432850 454340 586660 403570 360060 351950 394290 307960 408360 450660 386470 418290 372330 301050 372340 407920 406450 481930 438650 464650 579490 409400 381610 358370 401910 326810 414040 448620 370200 397520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 426780000 23376 4319 21927 43929;43930 35350;35351 35350 2 9606 Homo sapiens 0.10847285928616657 RQDLPSSLPEPETQAPPRS Unmodified 2104.0549 0.054895702 1894 A0M8Q2;Q6IPC0;P49593;B5MCT7;P49593-2;B3KX06 PPM1F Protein phosphatase 1F yes no 0 0 2 4 0 1 43.368 43.413 3 1.0772E-09 10949 20230619_1883_Aki_TMTPro18x_K_F4 126.04 116.87 15905 11713 16869 16014 16776 16683 16471 18505 18305 26632 28158 31292 32800 24907 26645 35946 36038 37399 14705 10763 17045 15832 17408 16864 16702 18989 18977 26598 28646 31341 33021 26500 27772 35994 34400 35502 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40996000 23377 1894 21928 43931 35352 35352 1 9606 Homo sapiens 0.04703045007727269 RQDLYSAR Unmodified 1007.5148 0.514842 3252 O43290;B4DDH9;B4DMR4 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 1 7 0.816 1 1 1 30.048 30.099 3 0.0070552 5694 20230619_1888_Aki_TMTPro18x_K_F8 87.639 55.285 24438 14754 18557 23045 32371 28822 23616 27926 39484 15248 14123 17484 15209 14507 18739 13545 19471 11250 22515 13591 19563 22650 32290 28688 24791 28238 38252 16204 15759 17538 15682 14997 19000 13522 18566 10740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67076000 23378 3252 21929 43932;43933;43934 35353 35353 1 9606 Homo sapiens 0.011385174978954637 RQDPGDNWEEGGGGGGGMEK Oxidation (M) 2047.829 0.82899487 4680 Q9UKY7;A0A8I5KX85;Q9UKY7-2;D3DND1;D6R9V8;D6RFH2;Q9UKY7-3;D6RAV0;D6RDN0;D6R973 CDV3 Protein CDV3 homolog yes no 0 1 1 1.5 0.5 1 1 37.877 37.94 3 6.9901E-07 9166 20230619_1880_Aki_TMTPro18x_K_F1 98.711 85.481 126090 108080 124350 115490 132300 136610 135450 138250 139980 152330 160700 129720 160890 124870 145380 159820 154070 144970 116610 99013 126510 116390 136790 136640 136590 141440 143250 152480 163700 132690 163360 130880 148660 159180 147270 137890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126280000 23379 4680 21930 43935;43936 35354;35355 35354 2852 2 9606 Homo sapiens -0.1530064717389905 RQDPGDNWEEGGGGGGGMEK Unmodified 2031.8341 0.83408024 4680 Q9UKY7;A0A8I5KX85;Q9UKY7-2;D3DND1;D6R9V8;D6RFH2;Q9UKY7-3;D6RAV0;D6RDN0;D6R973 CDV3 Protein CDV3 homolog yes no 0 0 1 3 0 1 41.446 41.507 3 1.6264E-09 10239 20230619_1882_Aki_TMTPro18x_K_F3 109.32 92.242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23380 4680 21930 43937 35356 35356 1 9606 Homo sapiens -0.14056343311267483 RQDSDLVQCGVTSPSSAEATGK Unmodified 2292.0652 0.065202392 4549 Q9HC52 CBX8 Chromobox protein homolog 8 yes yes 0 0 1 4 0 1 42.51 42.554 3 4.1791E-17 10655 20230619_1883_Aki_TMTPro18x_K_F4 158.33 138.78 21959 17051 17778 25604 20483 19408 17918 18511 20932 20085 23232 21961 22871 17300 21074 26743 24334 30490 20267 15681 18486 25050 20984 20078 18318 19034 21246 20270 23702 22072 23256 18515 21675 26909 23293 28898 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44800000 23381 4549 21931 43938 35357 35357 1 9606 Homo sapiens -0.02914760120029314 RQEALPLHQETK Unmodified 1448.7736 0.77357588 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 1 6.5 0.5 1 1 34.786 34.849 4 1.4826E-09 7521 20230619_1886_Aki_TMTPro18x_K_F6 172.57 121.48 101570 72391 85833 93571 91498 90100 97910 94741 106630 122200 146420 131920 141920 117130 121150 140220 146630 137890 93722 66486 88616 92714 94717 91514 98655 97224 109750 122290 148040 133060 143970 122540 125070 140360 139980 131020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 418140000 23382 380 21932 43939;43940 35358;35359 35358 2 9606 Homo sapiens 0.06714003949309699 RQEEEEAMR Unmodified 1176.5193 0.51933503 881 Q96MZ5;A0A087X0Q1;Q7Z739;Q8NA80;A0A024R7W5;B4DPX9;A0A087WY31;Q658Z6;Q8N3V9 YTHDF3;DKFZp451J085;DKFZp451A052 YTH domain-containing family protein 3 yes no 0 0 1 1 0 1 27.329 27.329 3 0.00044563 4950 20230619_1880_Aki_TMTPro18x_K_F1 111.06 86.281 12599 6810.9 15712 18374 16982 20382 18689 19227 21553 13264 19152 19789 21696 16694 17042 8977.2 19774 18855 11649 6335.3 15742 17604 17591 20401 18834 19569 21663 13937 19874 19675 21828 16935 17514 9728.1 18887 17807 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22721000 23383 881 21933 43941 35360 35360 1 9606 Homo sapiens -0.061863861415076826 RQEEEEVVR Unmodified 1172.5786 0.57856447 2415 B4DT65;B3KTL8;Q9BYJ9 YTHDF1 YTH domain-containing family protein 1 yes no 0 0 1 1 0 1 29.012 29.012 3 0.00046876 5603 20230619_1880_Aki_TMTPro18x_K_F1 110.31 75.777 36465 19139 31624 36943 34714 41728 36612 39009 59143 43010 49147 54795 51958 45031 38416 37531 52524 56687 33605 17696 32610 35870 35948 41730 37493 40146 58519 43649 51028 54710 52315 46396 40074 38916 50147 53623 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21899000 23384 2415 21934 43942 35361 35361 1 9606 Homo sapiens -0.000821668556682198 RQEEEEVVRK Unmodified 1300.6735 0.67352749 2415 B4DT65;B3KTL8;Q9BYJ9 YTHDF1 YTH domain-containing family protein 1 yes no 0 0 2 2.5 0.5 1 1 32.583 32.649 4 0.00065822 6624 20230619_1882_Aki_TMTPro18x_K_F3 108.98 74.483 127740 84405 128800 141320 166270 168440 169800 169780 196280 153290 187350 160740 179480 151840 158570 125520 204890 165600 117990 77786 131390 138310 169730 168240 171780 172890 197930 156110 192100 162570 182470 155610 163950 128940 195320 157000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67549000 23385 2415 21935 43943;43944 35362;35363 35363 2 9606 Homo sapiens 0.035217666154949256 RQEEIDYRPDGGAGDADFHYR Unmodified 2466.0949 0.094863036 84 Q96S66;A0A6Q8PG75;Q96S66-2;A0A6Q8PEZ7;A0A024R0G0;A0A6Q8PHQ1;A0A6Q8PG30;A0A024R095;A0A6Q8PGA4;Q96S66-4;Q96S66-3;A0A8I5KRC0;A0A6Q8PG14;Q5T1P5;A0A6Q8PG68;A0A6Q8PFF7 CLCC1 Chloride channel CLIC-like protein 1 yes no 0 0 2 3 0 1 39.704 39.761 5 3.1211E-09 9498 20230619_1882_Aki_TMTPro18x_K_F3 120.89 112.7 34166 26217 35829 39506 35216 46145 42822 39919 47372 43453 42168 44769 43322 35811 45498 45300 47952 40449 31593 24113 36285 38867 36884 45980 42868 41316 47790 43775 43591 45075 44281 37733 46358 45105 45804 38498 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42010000 23386 84 21936 43945 35364 35364 1 9606 Homo sapiens -0.07954060059682888 RQEELDR Unmodified 944.46756 0.46755746 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 1 1 0 1 23.216 23.216 3 0.017814 3844 20230619_1880_Aki_TMTPro18x_K_F1 91.626 17.211 23375 13380 28595 31000 37766 35149 27802 38516 34222 19898 31753 38874 28660 25060 33756 14397 38153 28829 21614 12403 28753 29883 38180 35281 28844 38597 34348 21684 32619 38096 29600 25743 34363 15517 36398 27263 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80605000 23387 4191 21937 43946 35365 35365 1 9606 Homo sapiens -0.006897617730942329 RQEELER Unmodified 958.48321 0.48320752 2015 A8K2G0;O15126;O15126-2;A0A087WZA6;B4E2V7;A0A087WXB0 SCAMP1 Secretory carrier-associated membrane protein 1 yes no 0 0 1 1 0 1 23.204 23.204 3 0.010653 3845 20230619_1880_Aki_TMTPro18x_K_F1 94.114 0 65074 28926 83812 89906 110620 125140 88867 104830 94171 66519 117220 134250 92078 106250 104720 35791 130020 135050 60144 27028 84019 86092 112170 123240 91111 107460 96390 71372 118230 132100 95567 106780 107260 42896 124190 127200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49597000 23388 2015 21938 43947 35366 35366 1 9606 Homo sapiens 0.002305247439608138 RQEEVLAR Unmodified 999.54614 0.54614213 4449 Q9BV73-2;Q9BV73 CEP250 Centrosome-associated protein CEP250 yes no 0 0 1 3.5 0.5 1 1 28.977 29.063 3 0.0095673 5279 20230619_1882_Aki_TMTPro18x_K_F3 80.787 39.213 14754 10082 13571 16860 23566 22693 19721 19308 22974 19942 30534 30922 23493 21696 19781 15445 29218 25955 13619 9289.5 14052 16527 23564 22424 20205 19980 23494 20456 30656 30559 24038 22353 20674 16229 27842 24553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6827500 23389 4449 21939 43948;43949 35367 35367 1 9606 Homo sapiens 0.046350905319854974 RQEGESEPPVTR Unmodified 1383.6743 0.67425577 2954 F2Z2W7;Q8IZ69;Q8IZ69-2;B4E213 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes no 0 0 1 1 0 1 27.282 27.282 3 0.024372 4925 20230619_1880_Aki_TMTPro18x_K_F1 64.55 50.888 3515.3 2048.9 2604.3 3273.7 4517.7 2468.1 2710.1 2965.7 4809.1 3093.4 2800.1 3163.9 4255 2599.5 2330.6 2312.8 4630.3 4002.2 3237.7 1888.2 2749.8 3193.2 4479.7 2574.2 2901 2999.7 4700 3124.9 3030.3 3185.7 4201.4 2692.9 2529.6 2423.1 4403.7 3785.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5124900 23390 2954 21940 43950 35368 35368 1 9606 Homo sapiens -0.00223438735451964 RQEHDISLDR Unmodified 1267.6269 0.62691165 108 B7Z6F7;A0A024R0R6;Q92797;A0A087WUE9;Q4LE61;M0R3C7;Q92797-2 SYMPK;SYMPK variant protein Symplekin yes no 0 0 1 2.5 0.5 1 1 28.192 28.285 3 0.024132 4913 20230619_1882_Aki_TMTPro18x_K_F3 84.658 52.16 5374.1 5824.8 6898.3 8096.3 7121 6830.1 6459.4 6682.9 8641 8456.2 10050 9057.8 9791.9 7174 7843 5962.6 10621 9062 4991 5345.9 6889.1 7969.8 7352.6 7001.8 6623.2 6888.4 8734.7 8469.4 10223 9099.1 9902.1 7409 8151 6191.7 10125 8580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8383600 23391 108 21941 43951;43952 35369 35369 1 9606 Homo sapiens 0.003803267842158675 RQELEAELAK Unmodified 1185.6354 0.63535107 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 1 4 0 1 43.891 43.935 3 1.1879E-05 11217 20230619_1883_Aki_TMTPro18x_K_F4 132.56 75.284 162550 130220 146180 144870 189240 212860 237150 211000 285880 217050 228850 210320 245580 202630 215660 240080 251300 205680 150160 119370 150580 146060 194550 210040 237610 215800 285970 219010 238080 213690 248700 211230 221900 238690 239790 195890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88316000 23392 3921 21942 43953 35370;35371 35370 2 9606 Homo sapiens 0.04995880700835187 RQELEQALGIR Unmodified 1311.7259 0.72589741 119 Q96GM5;A0A024R102;A0A024R137;Q96GM5-2;F8VRQ4;A8K9I5;H0YHV1 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 0 0 1 8 0 1 48.071 48.129 3 3.2361E-06 12723 20230619_1888_Aki_TMTPro18x_K_F8 147.71 108.44 93438 74903 90692 95373 73317 99499 93029 92018 103670 105120 114800 110900 120500 93471 100240 119170 113180 115430 86368 68749 92144 94684 78217 100080 93029 94894 105450 105710 117470 111770 121780 98385 103110 119080 108180 109660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 480380000 23393 119 21943 43954 35372 35372 1 9606 Homo sapiens 0.08250349749118868 RQELLEAR Unmodified 1013.5618 0.56179219 1737;2128 Q86UE8;Q86UE8-2;Q86UE8-3;D3DU05;B4DUC2;A0A804HJZ9;A0A804HKF1;J3KRK0;A0A804HJX3;A0A804HK10;A0A804HIB4;J3QS44;J3QR10;F8W7X8;A0A804HJM7;J3QS73;A8K8Z3;Q9UKI8-5;Q9UKI8;Q9UKI8-2;Q53TF9;B3KRP1 TLK2;TLK1 Serine/threonine-protein kinase tousled-like 2;Serine/threonine-protein kinase tousled-like 1 no no 0 0 1 4.5 0.5 1 1 33.111 33.181 3 0.00070929 6832 20230619_1885_Aki_TMTPro18x_K_F5 120.99 44.31 44646 36262 45601 52909 63045 61893 62519 68297 117120 53931 62829 62183 51990 56703 56124 56913 68258 58511 41289 33331 46549 52165 64134 62044 64686 68921 113820 55662 66523 62582 53732 58619 57668 57289 65124 55593 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63199000 23394 1737;2128 21944 43955;43956 35373 35373 1 9606 Homo sapiens 0.05555377049040544 RQELNSEIAK Unmodified 1186.6306 0.63060004 1480 A0A8Q3SII2;A0A8Q3SIB8;A0A8Q3SIF4;A0A384NPY9;O43909 EXTL3 Exostosin-like 3 yes no 0 0 1 6 0 1 37.951 38.026 3 0.0091294 8730 20230619_1886_Aki_TMTPro18x_K_F6 67.214 41.478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23395 1480 21945 43957 35374 35374 1 9606 Homo sapiens 0.04474996558087696 RQELVTK Unmodified 872.50797 0.50796571 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 1 7.5 0.5 1 1 34.761 34.795 3 0.0069443 7239 20230619_1887_Aki_TMTPro18x_K_F7 99.802 60.78 499310 241710 689930 678170 958130 931150 780670 868250 847900 586230 973260 1071300 841980 762470 939200 328710 1003900 940860 461980 225180 688820 651470 967690 920220 799920 883650 863660 622490 987840 1053900 868280 774140 953370 373700 959470 887380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 720610000 23396 3384 21946 43958;43959 35375;35376 35375 2 9606 Homo sapiens 0.0666120461733044 RQEMANILAQK Unmodified 1300.6922 0.69215444 1941 Q92556;A4D1X5;B4DJV6 ELMO1 Engulfment and cell motility protein 1 yes no 0 0 1 2 0 1 46.714 46.793 3 0.00031355 12950 20230619_1881_Aki_TMTPro18x_K_F2 88.338 30.502 82846 75121 83483 73638 95889 106600 104760 102450 134920 109330 100220 95760 130680 93492 101990 150720 122690 106190 76662 68754 84894 74998 98902 105230 106000 105080 134340 109780 105740 97883 130970 99564 105620 147900 117080 101400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129290000 23397 1941 21947 43960 35377 35377 1 9606 Homo sapiens 0.05383604985740931 RQEPAQPPISDAR Unmodified 1463.7481 0.74808942 2483 B4DGR1;Q5T8P4;Q9UPY6-2;Q9UPY6 WASF3 Wiskott-Aldrich syndrome protein family member 3 yes no 0 0 1 4 0 1 31.521 31.582 3 5.9005E-06 6157 20230619_1883_Aki_TMTPro18x_K_F4 125.73 90.282 8632.4 8988.1 12114 9437.5 6935.3 7350.7 8059 10913 12401 12514 15275 13113 14787 12264 13818 17508 16008 13206 8022.4 8227.4 11919 9482.7 7640.4 7679.4 8215.6 10938 12497 12576 15498 13277 15060 12949 14209 17259 15276 12599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8739100 23398 2483 21948 43961 35378 35378 1 9606 Homo sapiens 0.034765294268936486 RQEQIAK Unmodified 871.48756 0.48756462 1910 Q96DV6;A2A3R6;P62753;A2A3R5 RPS6 40S ribosomal protein S6 yes no 0 0 1 6.5 0.5 1 1 30.757 30.824 3 0.0035617 6132 20230619_1886_Aki_TMTPro18x_K_F6 117.4 45.449 105800 38496 179470 176370 313540 252960 186510 317040 134090 78069 166850 213650 101530 150180 171090 52280 229880 163500 98051 36447 178040 167580 310580 251270 194240 312640 140700 95603 167270 208460 109500 151580 175290 60770 218920 154350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84502000 23399 1910 21949 43962;43963 35379;35380 35379 2 9606 Homo sapiens 0.046680339575118523 RQEQIQAMPLADSQAVR Oxidation (M) 1955.9847 0.98470765 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1 PLEC Plectin yes no 0 1 1 5 0 1 37.763 37.856 3 0.05402 8632 20230619_1885_Aki_TMTPro18x_K_F5 43.261 34.919 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23400 3921 21950 43964 35381 35381 2594 1 9606 Homo sapiens 0.04495468138247816 RQESLELIR Unmodified 1142.6408 0.6407708 2796 CON__Q2UVX4 yes yes 0 0 1 6 0 1 39.146 39.231 3 0.00038764 9178 20230619_1886_Aki_TMTPro18x_K_F6 107.83 37.731 + 20921 17658 25064 25978 39181 43143 34040 38399 48427 28351 32972 39180 30371 30541 35623 27219 32260 33027 19380 16230 25339 25762 39455 42195 35050 39260 47840 29558 34494 38963 31364 31590 35899 27767 30904 31305 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60989000 23401 2796 21951 43965 35382 35382 1 0.07515604283321409 RQESQQNSDQNSNLNPHVIR Unmodified 2363.1326 0.13264553 823 A0A087WVF4;O14646-2;O14646;B3KT33 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes no 0 0 1 5 0 1 31.012 31.09 4 4.2144E-22 6042 20230619_1885_Aki_TMTPro18x_K_F5 148.56 130.86 1606.3 1259.6 1187 1616.2 1895.6 1072.1 813.09 1748.5 848.42 1437.1 841.75 1770 2524.3 2389.7 1226.4 2850.5 2224.4 3020.6 1481.7 1156.3 1251.7 1596 1877.2 1143.7 887.17 1729.2 869.36 1477.5 942.98 1802.6 2464.1 2468.1 1334.1 2861.3 2124.1 2864.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22216000 23402 823 21952 43966 35383 35383 1 9606 Homo sapiens 0.005604509258319013 RQETGREDGGTLAK Unmodified 1516.7594 0.75938238 354 A0A075B720;Q05CD9;Q05DF5;A8K8N5;A0A024R5S4;P40818;P40818-2 USP8 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 8 yes no 0 0 2 4.5 0.5 1 1 30.357 30.429 4 1.854E-06 5702 20230619_1883_Aki_TMTPro18x_K_F4 99.927 58.835 21696 13622 26635 24180 35533 29411 27969 30929 30713 25613 35668 31775 36539 31639 35802 19062 44607 33960 20070 12567 26750 23614 35911 29386 28743 31339 31314 26365 36379 31970 37237 31996 36802 20252 42521 32137 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55759000 23403 354 21953 43967;43968 35384 35384 1 9606 Homo sapiens 0.021673067303936477 RQGFQENYDAR Unmodified 1382.6327 0.63272531 2913 H7C4Q8;Q75MX6;E9PFE2;Q59FS0;Q9UHL9-2;Q9UHL9;Q9UHL9-3 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 yes no 0 0 1 4 0 1 32.201 32.261 3 0.00012398 6394 20230619_1883_Aki_TMTPro18x_K_F4 130.56 107.98 10748 9281.6 12514 12250 13752 15849 14223 16271 15620 14389 17964 20429 16778 14346 17551 13325 18804 19449 9955.5 8519.9 12584 12176 14199 15758 14366 16536 15919 14821 18289 20243 17197 14949 17879 13764 17983 18406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7012300 23404 2913 21954 43969 35385 35385 1 9606 Homo sapiens -0.04328574704118182 RQGGLGPIR Unmodified 952.55665 0.55664724 3838 V9HW63;Q13162;H7C3T4;A6NJJ0 HEL-S-97n;PRDX4 Peroxiredoxin-4 yes no 0 0 1 3.22 1.31 1 2 2 2 2 29.806 29.875 3 0.002589 6180 20230619_1885_Aki_TMTPro18x_K_F5 88.948 34.336 389940 258850 325730 378310 482960 552700 435670 452490 714360 329480 352320 312150 332940 299180 341760 321060 409940 291150 359650 238140 338950 374230 488830 543080 450190 465720 696300 340010 377350 317480 341220 310100 350960 320750 390750 277290 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 1742599999.9999998 23405 3838 21955 43970;43971;43972;43973;43974;43975;43976;43977;43978 35386;35387;35388;35389;35390 35390 5 9606 Homo sapiens 0.07847117977075868 RQGISSMQESGPK Oxidation (M) 1419.6776 0.67762659 3520 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 1 1 7 0 1 31.097 31.195 3 0.0077124 5813 20230619_1887_Aki_TMTPro18x_K_F7 92.906 70.027 17352 13159 15658 17912 27345 27215 22183 24728 28462 19373 26704 24684 30122 21381 20978 25327 31072 26233 16025 12089 16234 17812 27331 26756 22856 25275 28541 20045 27603 24731 30180 22389 22071 25427 29599 24924 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41736000 23406 3520 21956 43979 35391 35391 2185 1 9606 Homo sapiens -0.015425119530846132 RQGISSMQESGPK Unmodified 1403.6827 0.68271197 3520 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 0 1 8 0 1 35.669 35.658 3 8.7215E-11 7737 20230619_1888_Aki_TMTPro18x_K_F8 173.66 146.01 52758 45468 56012 56711 73116 78413 75420 68089 85922 72848 72434 75487 98186 73192 70189 96171 100320 86320 48825 41712 56900 56628 74630 77409 76192 70400 86408 73497 76078 76477 98031 76823 73662 95644 95599 82143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70247000 23407 3520 21956 43980 35392 35392 1 9606 Homo sapiens -0.0029820809045304486 RQGSFSEDVISHK Unmodified 1488.7321 0.732105 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;E9PNZ4 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 1 6.5 0.5 1 1 38.864 38.937 4 0.0068918 9110 20230619_1886_Aki_TMTPro18x_K_F6 70.332 49.747 38293 29305 41226 41227 55474 50082 56165 51614 53271 38785 43978 41557 45256 37793 52582 34426 45062 39235 35416 26932 41844 40769 56392 50019 56476 52286 54023 39989 45630 41941 46484 38941 52819 34985 43147 37236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42467000 23408 1566 21957 43981;43982 35393 35393 1 9606 Homo sapiens 0.007288231899792663 RQGVQVQVSTSNISSLEGAR Unmodified 2115.1032 0.10324288 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 1 4.5 1.12 1 1 1 1 44.822 44.893 3 5.47E-16 11623 20230619_1885_Aki_TMTPro18x_K_F5 151.87 133.27 78186 66883 71510 83239 76895 82195 82843 83912 86933 98463 108650 97442 103790 87351 99972 98009 95584 91506 72266 61359 73347 82699 79592 83249 83342 86001 89235 98669 110170 98653 105870 90998 101470 97980 91468 86996 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 196860000 23409 3606 21958 43983;43984;43985;43986 35394;35395 35394 2 9606 Homo sapiens 0.090295386476555 RQGYGEGFR Unmodified 1068.5101 0.51009098 4052;3991 Q5SQT9;Q9NR31;Q8NG23;B2R679;Q9NR31-2;H0Y5E8;Q53F37;Q9Y6B6;Q9H029 SAR1A;SAR1B;DKFZp434B2017 GTP-binding protein SAR1a;GTP-binding protein SAR1b no no 0 0 1 7 0.816 1 1 1 30.535 30.585 3 0.00011615 5847 20230619_1888_Aki_TMTPro18x_K_F8 129.63 86.113 321600 235270 269760 289890 319820 342020 316990 337140 423110 360690 407960 435660 442490 417220 316310 490680 563020 445420 296780 215950 279190 288980 328390 341810 323070 345320 424260 365730 420780 438400 445100 434530 338390 488890 535500 423970 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1033199999.9999999 23410 4052;3991 21959 43987;43988;43989 35396;35397;35398 35398 3 9606 Homo sapiens -0.021423666448527 RQHEAEEGVR Unmodified 1209.585 0.58504683 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0 PLEC;PLEC1 Plectin yes no 0 0 1 1 0 1 23.019 23.019 3 0.078761 3737 20230619_1880_Aki_TMTPro18x_K_F1 39.917 16.541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23411 3921 21960 43990 35399 35399 1 9606 Homo sapiens -0.011362289042835982 RQIIVEEAK Unmodified 1084.6241 0.6240581 4013 Q549N0;Q9Y281;Q9Y281-3;F8WDN3 CFL2 Cofilin-2 yes no 0 0 1 5.5 0.5 1 1 39.536 39.625 3 4.3872E-05 9362 20230619_1886_Aki_TMTPro18x_K_F6 150.1 80.828 265670 153170 179560 243930 248120 280180 233710 267190 367650 307740 373360 384590 397590 343140 211960 461740 473990 437010 244540 141170 190980 239140 252460 280120 240610 274870 366960 311340 383560 385820 396520 361470 234630 459930 450720 415470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 526090000 23412 4013 21961 43991;43992 35400 35400 1 9606 Homo sapiens 0.08513103397376653 RQIQNIK Unmodified 898.53485 0.53484916 4677 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 0 1 3.5 0.5 1 1 34.836 34.892 3 0.006544 7534 20230619_1882_Aki_TMTPro18x_K_F3 105.2 48.098 66446 29565 84375 86155 104760 116600 85322 100840 98463 50091 84743 81352 62731 60214 88536 33032 86273 68518 61403 27581 84530 82628 106660 115090 87621 102710 98809 54364 86653 80446 65994 61371 89129 35812 82444 64768 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43277000 23413 4677 21962 43993;43994 35401 35401 1 9606 Homo sapiens 0.08152313228515595 RQIQSLTCEVDGLR Unmodified 1673.8519 0.85190256 2433 B3KWQ6;P41219;P41219-2;H7C5W5 PRPH Peripherin yes no 0 0 1 7.5 0.5 1 1 48.161 48.238 3 2.415E-22 12795 20230619_1888_Aki_TMTPro18x_K_F8 195.84 169.11 281090 231310 269430 289530 271920 290130 288920 319820 400620 301060 274910 318090 310840 257800 307130 334020 362470 306150 259840 212250 274800 287670 282850 294030 293790 324120 396610 305910 289870 320010 316040 271920 315540 332820 345880 291280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 841820000 23414 2433 21963 43995;43996 35402 35402 1 9606 Homo sapiens 0.04193068472204686 RQITQNTDYR Unmodified 1293.6426 0.64256171 4310 Q92896;Q92896-3;Q92896-2;Q6ZMF1 GLG1 Golgi apparatus protein 1 yes no 0 0 1 7 0.707 1 2 1 29.86 29.925 2;3 1.5627E-05 5663 20230619_1888_Aki_TMTPro18x_K_F8 126.71 101.32 13923 10183 12343 20859 32956 37188 28305 31334 41917 15429 17014 12653 16035 14510 18055 15003 24484 14648 12854 9386 13041 20359 32509 36197 29185 31962 40856 16422 18558 13066 16522 14932 18656 15061 23296 13953 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79587000 23415 4310 21964 43997;43998;43999;44000 35403;35404 35404 2 9606 Homo sapiens 0.007486133012889695 RQLCGGSQAAIER Unmodified 1444.7205 0.72049446 67 A0A024R014;A0A024QZW3;Q96S59;Q96S59-2;Q96S59-3 RANBP9 Ran-binding protein 9 yes no 0 0 1 7.5 0.5 1 1 31.646 31.697 3 6.9836E-05 6014 20230619_1887_Aki_TMTPro18x_K_F7 109.84 77.776 19380 19347 23257 18865 23989 22903 23240 23370 31664 22656 22431 20267 22199 16402 24459 23803 28525 18141 17974 17701 23282 19170 24815 22885 23736 23815 31390 22879 23429 20566 22766 17442 25048 23489 27181 17329 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17076000 23416 67 21965 44001;44002 35405;35406 35405 2 9606 Homo sapiens 0.015923028949828222 RQLDTETNLHLNTK Unmodified 1681.8747 0.87474649 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 6.5 0.5 1 1 40.271 40.35 4 1.3677E-08 9382 20230619_1887_Aki_TMTPro18x_K_F7 154.6 107.06 210450 150400 165770 190210 205370 221560 210830 208570 226500 225880 223550 230470 256550 200720 200790 239950 260920 232360 194110 138100 172850 189200 210400 221370 212720 214420 229860 227490 230950 232730 258080 210180 208670 239970 248860 220880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 761530000 23417 3440 21966 44003;44004 35407 35407 1 9606 Homo sapiens 0.06108410861361335 RQLEDGDQPESK Unmodified 1400.6532 0.65318598 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 0 1 2 0.816 1 1 1 34.164 34.203 3 2.9064E-13 7645 20230619_1880_Aki_TMTPro18x_K_F1 205.87 152.3 108090 46328 134390 132820 188120 199140 147240 176630 172570 131250 216140 238220 185480 186820 189880 74297 233060 233490 99855 43215 135110 127710 189950 195630 151740 180700 175860 138370 218520 234960 190680 188500 194720 85787 222580 220080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 377210000 23418 3197 21967 44005;44006;44007 35408;35409 35408 2 9606 Homo sapiens -0.03111448834965813 RQLEDGDQPESKK Unmodified 1528.7481 0.74814899 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 0 2 3 0 1 34.739 34.8 4 0.0033888 7486 20230619_1882_Aki_TMTPro18x_K_F3 73.156 55.239 30046 18079 33577 35807 47043 38312 44740 51354 38539 31625 52869 59584 42186 42737 47445 20674 53002 42388 27763 16710 34020 34723 47591 38846 45078 51023 40125 33837 53165 58591 43683 43449 48302 22449 50585 40069 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29997000 23419 3197 21968 44008 35410 35410 1 9606 Homo sapiens 0.004924846362200697 RQLEEAEEEAQR Unmodified 1486.7012 0.7011988 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 1 1 0 1 38.165 38.165 3 1.0652E-09 9247 20230619_1880_Aki_TMTPro18x_K_F1 157.5 118.71 112060 95436 111520 104160 134270 127780 136920 137150 184090 161500 173810 165280 191770 131500 123210 210680 179590 156980 103640 87445 113610 104870 137650 127720 139330 140060 184420 162050 179420 166610 191730 141000 130090 207170 171130 149750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1156400000 23420 148 21969 44009 35411 35411 1 9606 Homo sapiens -0.022683749149337018 RQLEEEQR Unmodified 1086.5418 0.54178503 1017 E7EN19;Q53TX8;A0A0D9SEY1;B7Z388;O95819-3;O95819-6;G5E948;V9HWH3;O95819-2;B7Z3V5;O95819;O95819-5;H7C360;O95819-4;E7ENQ1;Q5MD60;E7EX83;H7C0P6;H7C3Z6;Q9UKE5-3;Q9UKE5-4;Q9UKE5;Q9UKE5-7 MAP4K4;HEL-S-31;TNIK Mitogen-activated protein kinase kinase kinase kinase 4;TRAF2 and NCK-interacting protein kinase yes no 0 0 1 1 0 1 26.363 26.363 3 0.0038097 4652 20230619_1880_Aki_TMTPro18x_K_F1 88.948 26.402 7735.5 4215.8 9537.6 7846.6 11414 12605 7562 9947.3 9658.5 7579.1 12327 11670 9108.1 8947.1 8860.9 4906.9 13455 13867 7151.7 3895 9553.6 7683.7 11604 12316 7927.6 10274 9814.9 7914 12374 11564 9397 9112.2 9245.3 5509.7 12832 13075 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3101300 23421 1017 21970 44010 35412 35412 1 9606 Homo sapiens 0.0019758131841172144 RQLGLVPR Unmodified 937.58213 0.58213371 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;A0A8V8TPW9;A0A8V8TPX4;A0A8V8TRC7;A0A3B3ITD8;A0A024RCC4;H0YDA1 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 1 6 0 1 36.097 36.157 3 0.0031411 8021 20230619_1886_Aki_TMTPro18x_K_F6 83.265 58.446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23422 1852 21971 44011 35413 35413 1 9606 Homo sapiens 0.11084592499514656 RQLIVPPHLAHGESGAR Unmodified 1837.0071 0.007098069 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;Q6ZME7;H0Y827;Q96AY3-2 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 0 1 3 0 1 34.773 34.834 5 8.9856E-14 7497 20230619_1882_Aki_TMTPro18x_K_F3 123.08 101.85 17490 14794 16610 19775 18246 23637 22571 20586 24446 22110 22059 31341 24103 24958 24155 20034 27735 29376 16169 13583 16998 19602 18966 23525 22555 21293 24701 22549 22905 31129 24572 25681 24735 20752 26513 27797 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36189000 23423 167 21972 44012 35414 35414 1 9606 Homo sapiens 0.12207480388838121 RQLQEDQENNLQDNQTSNSSPCR Unmodified 2760.2118 0.21176006 4297 Q92576-2;Q92576 PHF3 PHD finger protein 3 yes no 0 0 1 2 0 1 34.269 34.325 3 3.5783E-05 7426 20230619_1881_Aki_TMTPro18x_K_F2 83.905 81.437 1891.7 0 1312.4 2078.1 796.19 1554.6 1449.6 2194.8 2451.9 2170.6 1686.2 1978.1 2586 1759.6 1163.2 2307.5 2464.9 1944.2 1733.8 0 1379 1915.7 894.32 1619.5 1455.9 2195.6 2411.1 2188.8 1805.1 2008.7 2541.8 1853 1285.7 2286.3 2342.2 1852.4 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6016800 23424 4297 21973 44013 35415 35415 1 9606 Homo sapiens -0.09793734692902945 RQLQQLQEGTLQEYQK Unmodified 1989.028 0.02795267 4525 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 0 0 1 8 0 1 48.464 48.53 3 1.6137E-14 12921 20230619_1888_Aki_TMTPro18x_K_F8 179.79 141.42 24451 19799 22152 24816 16904 28558 21631 22783 28432 27515 32886 34600 32465 27125 23759 34120 34054 39283 22590 18169 22641 24691 18198 28436 21762 23805 28743 27774 33508 34552 32737 28602 24940 34430 32519 37237 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40187000 23425 4525 21974 44014 35416 35416 1 9606 Homo sapiens 0.07299981187156845 RQLQTPK Unmodified 869.5083 0.50830006 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 1 3 0 1 32.307 32.385 3 0.038783 6533 20230619_1882_Aki_TMTPro18x_K_F3 67.757 10.262 50815 29349 62153 65217 64707 75290 53775 65928 59766 39128 55757 50602 43290 41452 54665 23750 50204 33148 46988 27185 62242 62971 66725 75068 55110 67268 60302 41356 56838 50534 45139 42107 54959 24797 47960 31447 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19554000 23426 3588 21975 44015 35417 35417 1 9606 Homo sapiens 0.06832624337187099 RQLSEDETTTQGVR Unmodified 1618.7911 0.79107644 1321 A0A1W2PQQ1;Q5HYW2 NHSL2 NHS-like protein 2 yes no 0 0 1 2.5 0.5 1 1 32.07 32.139 3 5.1859E-14 6529 20230619_1881_Aki_TMTPro18x_K_F2 167.61 142.68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23427 1321 21976 44016;44017 35418;35419 35418 2 9606 Homo sapiens 0.006432546936366634 RQLVEDR Unmodified 914.49338 0.49337828 2302 B2RBU0;Q99633;Q99633-2 PRPF18 Pre-mRNA-splicing factor 18 yes no 0 0 1 3.5 0.5 1 1 28.65 28.742 3 0.023027 5146 20230619_1882_Aki_TMTPro18x_K_F3 73.26 29.452 36615 26149 34132 42114 41748 50526 40251 46296 51982 37209 48239 44320 49171 41765 36930 32746 50366 41375 33811 24078 35047 41292 42783 50316 41044 47331 52084 38340 49663 44589 49581 42699 38479 33560 47998 39240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 14157000 23428 2302 21977 44018;44019 35420;35421 35420 2 9606 Homo sapiens 0.03271132469183158 RQLYLPMLFK Unmodified 1307.7424 0.7423991 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;A0A7I2YQX3;B3KWD0;C9JKM9 XPO1 Exportin-1 yes no 0 0 1 8 0 1 61.103 61.135 3 0.072381 18254 20230619_1888_Aki_TMTPro18x_K_F8 43.492 19.421 70124 60012 61351 57667 64735 99311 69297 65915 107720 44315 43602 43155 45389 38392 46146 47313 43411 45164 64793 54928 63115 58996 67418 96445 70732 69055 104800 46081 47826 43730 46332 40231 46767 47282 41574 42914 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20732000 23429 3228 21978 44020 35422 35422 1 9606 Homo sapiens 0.10083759381495838 RQMSVPGIFNPHEIPEEMCD Unmodified 2385.0552 0.055171752 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2V2H0;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V488;B7ZB16;B4DR01;A0A7I2YQX3;B3KWD0 XPO1 Exportin-1 yes no 0 0 1 4.5 0.5 1 1 57.03 57.064 3 2.4621E-05 16691 20230619_1885_Aki_TMTPro18x_K_F5 92.492 91.926 32043 31265 35904 31142 30561 36270 36916 35044 37139 34512 35346 35855 39966 37628 41015 39818 44580 42321 29694 28612 36047 31561 32337 36270 36871 35874 37750 34960 36571 36408 40723 38861 41875 40127 42604 40179 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 228300000 23430 3228 21979 44021;44022 35423;35424 35424 2 9606 Homo sapiens -0.08195362650621973 RQNALLEQQVR Unmodified 1353.7477 0.74769548 3693 P61244;P61244-2;Q8TAX8;G3V5L1;G3V570 MAX Protein max yes no 0 0 1 4.5 3.5 1 1 35.214 35.208 3 3.3055E-17 7567 20230619_1888_Aki_TMTPro18x_K_F8 198.81 151.73 118390 84582 103020 118060 122400 148730 129460 124330 152800 100590 104390 83928 101800 74680 92054 122570 120770 86702 109270 77747 106340 116810 125970 147420 130780 128070 152250 102550 109130 85819 103500 79884 95521 120300 115040 82854 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 164890000 23431 3693 21980 44023;44024 35425;35426 35426 2 9606 Homo sapiens 0.08497154497672454 RQNEDIEPTSSR Unmodified 1430.675 0.67498405 2065 Q9NW82;A8K564;D6RIW8 WDR70 WD repeat-containing protein 70 yes no 0 0 1 1.5 0.5 1 1 27.841 27.879 3 2.2129E-05 5251 20230619_1880_Aki_TMTPro18x_K_F1 130.15 100.35 10515 5586.3 7455.5 9380.2 15920 14284 14559 13035 14661 10447 15001 11936 11915 12361 12356 8618.2 17710 15575 9678.2 5154.2 7966.4 9216 15808 14043 14748 13333 14923 10753 15221 12073 12300 12540 12829 9122.8 16878 14728 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 14404000 23432 2065 21981 44025;44026 35427;35428 35427 2 9606 Homo sapiens -0.023126440863734388 RQNIGVATFIGLDK Unmodified 1530.8518 0.85182621 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;B3KVJ5 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 1 4 0 1 55.428 55.44 3 0.031597 16426 20230619_1883_Aki_TMTPro18x_K_F4 51.577 25.86 215050 186900 212090 209250 200300 206820 211520 213080 312560 252760 242750 244700 284650 222990 222850 276700 272880 286500 198900 171280 215470 209570 209370 209580 215740 218320 309820 253240 254100 248060 286200 233710 230760 277570 260700 271960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64530000 23433 4593 21982 44027 35429 35429 1 9606 Homo sapiens 0.10763436534534776 RQNVELK Unmodified 885.50321 0.50321468 1793 Q96I59;A0A8Q3SHT5;B3KPX5;A0A8Q3SHL5;A0A8Q3SIK4;A0A8Q3WKF4;A0A8Q3WKE5;A0A8Q3WKI6;A0A8Q3SHT7;A0A8Q3WLI0;A0A8Q3SHU1;E9PRK2;A0A8Q3SHS9;A0A8Q3SHP1;A0A8Q3WKD9;A0A8Q3SHV4;A0A8Q3WLT2 NARS2 Probable asparagine--tRNA ligase, mitochondrial yes no 0 0 1 7.5 0.5 1 1 34.32 34.354 3 0.077888 7272 20230619_1888_Aki_TMTPro18x_K_F8 52.403 2.9846 34853 24214 40868 42333 54416 53961 49495 53242 55209 39406 56552 64655 50948 46805 51012 32585 74024 60354 32244 22324 41223 41389 55254 53646 50377 54066 55902 41344 57774 63829 52226 48125 53026 34594 70509 57080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42196000 23434 1793 21983 44028;44029 35430 35430 1 9606 Homo sapiens 0.05588320474566899 RQPEAVHLLDK Unmodified 1304.7201 0.72008375 4301 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 1 7 0 1 40.959 41.026 3 0.0020207 9680 20230619_1887_Aki_TMTPro18x_K_F7 83.617 41.062 35785 30337 35440 42592 42758 53547 47275 48593 52949 47709 49581 58236 56436 44681 46523 64190 54761 59810 33095 27869 36198 42124 44006 53168 47573 49956 53483 48587 51382 58186 56898 47566 48038 63890 52350 56835 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82993000 23435 4301 21984 44030 35431 35431 1 9606 Homo sapiens 0.07991251237444885 RQPIDNVSR Unmodified 1083.5785 0.57850489 1943 A4D213;A4D212;Q8N201 DKFZP586J0619;INTS1 Integrator complex subunit 1 yes no 0 0 1 6.5 0.5 1 1 25.877 25.943 3 0.00054716 5315 20230619_1886_Aki_TMTPro18x_K_F6 102.52 63.561 41682 25320 43278 47225 58775 54463 50487 56943 59511 39418 50583 55557 48144 42313 48431 32439 58745 54264 38492 23380 44073 45953 59524 54564 51675 57521 59694 41284 52252 55184 49250 43579 49717 34035 56076 51325 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27242000 23436 1943 21985 44031;44032 35432;35433 35432 2 9606 Homo sapiens 0.04005877934991986 RQPLSVSDR Unmodified 1056.5676 0.56760585 1542 A0A494BZV7;E5RI93;E7EVZ1;Q86UP3;Q86UP3-4;Q86UP3-2;Q86UP3-5 ZFHX4 Zinc finger homeobox protein 4 yes no 0 0 1 7.5 0.5 1 1 30.156 30.216 3 0.0050198 5770 20230619_1888_Aki_TMTPro18x_K_F8 75.509 42.617 15011 14361 15315 18514 16168 18613 16428 18008 22228 21147 21241 19730 18456 16545 22144 21990 22267 20212 13897 13175 15565 18351 16748 18798 16733 18520 22276 21162 21714 19991 19107 17455 22458 21913 21290 19224 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11382000 23437 1542 21986 44033;44034 35434 35434 1 9606 Homo sapiens 0.041584755607118495 RQQDPSPGSNLGGGDDLK Unmodified 1839.8711 0.87111768 2099 A8K719;Q13951-2;A0A024R6W3;J3KTD8 CBFB Core-binding factor subunit beta yes no 0 0 1 3.5 0.5 2 2 39.819 39.868 3;4 1.4329E-18 9539 20230619_1882_Aki_TMTPro18x_K_F3 175.44 150.12 115850 84903 106480 103470 139290 156170 143600 144660 178960 152120 160780 149400 171240 122520 142800 165930 166440 152100 106980 77920 109450 103670 142290 153630 145580 148690 179530 153310 166160 150960 172950 129650 147130 165200 158920 144670 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 392850000 23438 2099 21987 44035;44036;44037;44038 35435;35436;35437;35438 35435 4 9606 Homo sapiens -0.015223037031546482 RQQEEEAAAQMK Unmodified 1417.662 0.66197652 4541 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 1 3 0 1 36.757 36.812 3 3.3343E-05 8293 20230619_1882_Aki_TMTPro18x_K_F3 120.53 80.868 33999 25045 26391 31308 33687 44437 38621 32610 43297 36650 44426 45743 41461 34161 36702 41566 50000 41612 31360 22991 27597 31256 34625 43645 38772 34256 43853 37121 45402 45630 42190 36007 38161 41643 47653 39554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25307000 23439 4541 21988 44039 35439 35439 1 9606 Homo sapiens -0.03014798470144342 RQQEEILR Unmodified 1070.5833 0.58325592 288 Q6Y7W6;Q6Y7W6-5;Q6Y7W6-4;A0A024R4A5;Q6Y7W6-3;I1E4Y6;A0A7I2V361;A0A7I2V3H0;A0A7I2V516;E7ESB6;A0A7I2V3H7;B4DZM1;B4DRT8;C9JHW1 GIGYF2;TNRC15 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 0 0 1 3.5 0.5 1 1 30.59 30.667 3 0.00081727 5859 20230619_1882_Aki_TMTPro18x_K_F3 125.82 77.021 59089 45025 51848 59765 64811 69420 69317 64372 79685 69326 81184 73617 84123 70666 65153 82385 82431 70742 54560 41352 53520 59252 66423 69346 69925 66257 80612 69964 83277 74496 84866 73592 67630 81910 78622 67357 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44374000 23440 288 21989 44040;44041 35440;35441 35440 2 9606 Homo sapiens 0.050787620777555276 RQQEEMMR Unmodified 1106.4961 0.49609717 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;H7C367 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 1 3 0.816 1 1 1 24.38 24.479 3 8.7177E-05 3819 20230619_1882_Aki_TMTPro18x_K_F3 153.08 67.871 933310 681390 919220 931540 1086000 1215000 1063100 1123500 1422700 1081800 1131000 1073000 1188900 992710 1061200 1049300 1412800 1086500 862320 626120 937570 923760 1115000 1204700 1084300 1152500 1416500 1096100 1176100 1087100 1205900 1029900 1100500 1055900 1346100 1032800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1123700000 23441 1112 21990 44042;44043;44044 35442;35443;35444 35443 3 9606 Homo sapiens -0.052891034598133047 RQQEGFK Unmodified 891.45626 0.45626449 1112;2614 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;H7C367;B4DWI8;Q8WXF1;A0A024RDP4;Q8WXF1-2;A0A0U1RQF9 NONO;PSPC1 Non-POU domain-containing octamer-binding protein;Paraspeckle component 1 no no 0 0 1 7 0.816 1 1 1 31.979 32.023 3 0.0015134 6326 20230619_1888_Aki_TMTPro18x_K_F8 147.04 78.725 637140 263980 986350 947380 1456900 1491300 1064100 1367700 977700 609130 1158700 1296100 759600 834200 1160100 319880 1251100 929470 590000 247720 979570 906280 1463200 1462300 1094300 1384500 1006300 676990 1164600 1267800 808190 847970 1172700 366840 1193900 877540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 591980000 23442 1112;2614 21991 44045;44046;44047 35445;35446;35447 35447 3 9606 Homo sapiens 0.00619460923439874 RQQEQQVPILEK Unmodified 1494.8154 0.8154407 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 1 7 0.816 1 1 1 43.223 43.284 3 2.1815E-05 10511 20230619_1887_Aki_TMTPro18x_K_F7 125.53 74.435 302880 233620 264690 269800 239990 266150 274510 271970 323660 362930 385770 367940 387950 334490 322140 413590 402260 374150 279670 214260 271700 269560 252330 269630 276430 279900 329570 362010 392770 372270 392820 350240 333650 411900 383910 355890 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1507199999.9999998 23443 3606 21992 44048;44049;44050 35448;35449;35450 35449 3 9606 Homo sapiens 0.08782559637847953 RQQETAAAETETR Unmodified 1489.7121 0.71209784 3237 O15240;Q05BJ3 VGF Neurosecretory protein VGF;Neuroendocrine regulatory peptide-1;Neuroendocrine regulatory peptide-2;Antimicrobial peptide VGF[554-577] yes no 0 0 1 1 0 1 23.216 23.216 3 0.04662 3888 20230619_1880_Aki_TMTPro18x_K_F1 46.88 34.112 1350.9 0 1874 1086.8 0 0 1135.8 1549.6 1026.6 1085.8 1583.2 1252.8 2895.8 1715.8 0 782.05 1315.6 924.3 1245.3 0 1827 995.3 0 0 1080 1463 1073.4 1125.6 1648.9 1280.6 2770.9 1709 0 807.38 1243.3 877.83 1 0 1 1 0 0 1 1 1 1 1 1 1 1 0 1 1 1 40149000 23444 3237 21993 44051 35451 35451 1 9606 Homo sapiens -0.013169725406214638 RQQEVETELK Unmodified 1258.6517 0.65172941 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-3;M0QYR1;M0QX04 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 1 3.5 0.5 1 1 37.343 37.391 3 0.00015127 8529 20230619_1882_Aki_TMTPro18x_K_F3 124.42 68.011 276120 233260 275400 262290 316770 292790 315040 302520 355710 282200 337950 327590 364030 293220 348010 333460 369240 309630 255370 213800 280300 263060 325280 294200 319000 307880 359140 287800 348690 329500 369840 305720 355220 333220 352670 294560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 443180000 23445 33 21994 44052;44053 35452 35452 1 9606 Homo sapiens 0.032749618669413394 RQQQAATSESSQSEASVR Unmodified 1948.9199 0.91985878 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 1 3 0 1 23.081 23.234 3 2.6386E-16 3795 20230619_1882_Aki_TMTPro18x_K_F3 165.9 149.76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23446 594 21995 44054 35453 35453 1 9606 Homo sapiens -0.01664435134057385 RQQQLTAMK Unmodified 1102.5917 0.59171211 148;1719 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6 MYH9;MYH11 Myosin-9;Myosin-11 no no 0 0 1 3 0 1 36.001 36.058 3 0.034269 8005 20230619_1882_Aki_TMTPro18x_K_F3 58.246 31.648 46009 38404 37480 38678 74495 121700 69192 70275 160850 22766 24646 25991 28688 24685 29604 28159 38322 32689 42484 35167 39416 40086 74841 115450 72709 73994 152770 26017 31852 26244 29284 25696 30556 28499 36543 31021 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50953000 23447 148;1719 21996 44055 35454 35454 1 9606 Homo sapiens 0.044519927227156586 RQQQQWPGR Unmodified 1182.6006 0.60063732 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;Q7RTQ4 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 1 3 0 1 28.959 29.061 3 0.0010461 5256 20230619_1882_Aki_TMTPro18x_K_F3 82.75 46.226 23182 16872 28700 27334 33065 36939 30573 41472 32681 20565 30470 33001 21052 23732 30123 15280 36846 25651 21463 15535 28754 26868 33919 36699 31070 41457 33028 22277 30989 32610 22266 24316 30753 16127 35111 24294 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11294000 23448 3808 21997 44056 35455 35455 1 9606 Homo sapiens 0.016641024034015572 RQQSEISAAVER Unmodified 1372.7059 0.70589025 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DQN8 PRRC2C Protein PRRC2C yes no 0 0 1 4.5 0.5 1 1 32.816 32.886 3 4.515E-13 6656 20230619_1883_Aki_TMTPro18x_K_F4 182.89 139.26 38691 27761 30711 37793 39518 34362 41069 39782 44648 38712 44006 37078 45080 37002 35250 44539 41521 35759 35688 25510 32027 37290 40337 35151 41419 40247 45238 39140 45169 37757 45501 38563 36413 44124 39627 34078 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58536000 23449 2894 21998 44057;44058 35456 35456 1 9606 Homo sapiens 0.03444554018506096 RQQVEALYR Unmodified 1161.6255 0.62545508 513 A0A024R8D4;Q9Y399 MRPS2 28S ribosomal protein S2, mitochondrial yes no 0 0 1 1 0 1 35.727 35.727 3 7.5554E-05 8273 20230619_1880_Aki_TMTPro18x_K_F1 114.4 67.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23450 513 21999 44059 35457 35457 1 9606 Homo sapiens 0.051107374861203425 RQQVLDR Unmodified 913.50936 0.50936269 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;B4DGT1;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 5.5 0.5 1 1 26.809 26.862 3 0.0021921 4721 20230619_1886_Aki_TMTPro18x_K_F6 131.03 74.91 93272 58092 88657 90765 129760 116260 118960 124210 135910 80202 103050 103320 101940 77909 113650 52839 120850 88902 86082 53504 91053 89291 131050 115820 121060 125130 136000 84179 107270 102920 104590 79961 115400 55735 115340 84174 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104500000 23451 1022;3868 22000 44060;44061 35458;35459 35459 2 9606 Homo sapiens 0.04914838706088176 RQREEEIEAQEK Unmodified 1543.759 0.75904803 3321 O75937;S4R3J5 DNAJC8 DnaJ homolog subfamily C member 8 yes no 0 0 2 1.8 0.748 2 2 1 32.11 32.149 3;4 8.7108E-10 6813 20230619_1880_Aki_TMTPro18x_K_F1 184.31 117.23 71346 57674 64816 65796 88057 71079 73921 81208 89627 80923 91929 78888 88054 68074 72545 82953 102180 75726 65917 52877 66702 65887 89079 71791 75862 82218 90501 81733 93927 79869 89235 71387 75723 82694 97300 72098 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 542210000 23452 3321 22001 44062;44063;44064;44065;44066 35460;35461 35460 2 9606 Homo sapiens 0.008918870105617316 RQSEDECFR Unmodified 1225.5146 0.51458401 3369 O96028;O96028-2;A0A7I2V2S2;O96028-4 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 0 0 1 1.5 0.5 1 1 28.377 28.414 3 0.00024547 5403 20230619_1880_Aki_TMTPro18x_K_F1 110.38 97.766 24837 15649 23580 23753 24402 26740 23430 24846 31600 25347 17680 21892 39228 26141 16223 27524 37034 28979 22923 14407 24068 23353 25272 26760 23933 25521 31202 25509 19739 22513 38238 26942 18103 27685 35177 27539 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26099000 23453 3369 22002 44067;44068 35462;35463 35462 2 9606 Homo sapiens -0.08915270284273902 RQSGQTDPLQK Unmodified 1256.6473 0.64731274 707 P46940;A4QPB0;A0A024RC65;A0A0J9YXZ5;Q6P1N4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 1 7.5 0.5 1 1 35.164 35.194 3 0.00035132 7571 20230619_1888_Aki_TMTPro18x_K_F8 102.4 43.423 49830 28473 47826 43469 62472 73585 50060 55862 90154 59951 84242 103950 106560 82023 59772 72271 136790 147700 45975 26228 48943 43038 63528 71678 52438 58381 89236 61789 87735 102710 105850 84955 65911 76941 130210 139450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51351000 23454 707 22003 44069;44070 35464;35465 35465 2 9606 Homo sapiens 0.02925497444039138 RQSLIEDAR Unmodified 1086.5782 0.57817054 3395 P07101-3;P07101-4;P07101-2;P07101;P07101-6;P07101-5;Q7KZ39;Q7KZ38;Q16846;Q15587;Q8IZQ6;O43816;Q8IZQ7;Q9NP14 TH Tyrosine 3-monooxygenase yes no 0 0 1 4.5 0.5 1 1 32.901 32.983 3 0.0041657 6760 20230619_1885_Aki_TMTPro18x_K_F5 71.221 34.797 28329 22626 30262 56276 26023 28489 32171 29622 44836 32081 37718 38301 35473 33639 38203 34253 41965 37557 26206 20972 30671 53592 27544 30892 32465 30329 44617 32509 38944 38439 36437 34870 38982 34615 40085 35653 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20902000 23455 3395 22004 44071;44072 35466;35467 35467 2 9606 Homo sapiens 0.038344582151466966 RQSLPASPR Unmodified 1010.5621 0.56212655 3967 Q3KQU3-4;B3KU03;Q6NX58;D3DPS3;Q3KQU3;Q3KQU3-2;H0YF21 MAP7D1;RPRC1 MAP7 domain-containing protein 1 yes no 0 0 1 3 0 1 29.56 29.662 3 0.0012195 5474 20230619_1882_Aki_TMTPro18x_K_F3 90.149 62.377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23456 3967 22005 44073 35468 35468 1 9606 Homo sapiens 0.05726796768908571 RQSNVAAPGDATPPAEK Unmodified 1707.854 0.85401105 3960 Q96QC0;Q2L6I0;Q58F28 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes no 0 0 1 4.5 0.5 1 1 35.77 35.839 3 5.8812E-07 7840 20230619_1885_Aki_TMTPro18x_K_F5 110.26 87.269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23457 3960 22006 44074;44075 35469;35470 35470 2 9606 Homo sapiens 0.02839820481699462 RQSSGSATNVASTPDNR Unmodified 1746.8245 0.82450184 1818 Q7Z460;Q7Z460-3;Q7Z460-5;Q7Z460-4;Q7Z460-2;A0A8V8TLP7;F8WA11;A0A8V8TQK9;A0A8V8TRF6;H0Y5T1;B7Z4E5;B7Z7Q8;B7Z5R7;Q6TAR3 CLASP1 CLIP-associating protein 1 yes no 0 0 1 6 0 1 26.198 26.234 3 0.00037918 4520 20230619_1886_Aki_TMTPro18x_K_F6 76.85 62.164 921.07 0 1136 0 1976 2550.2 763.25 1445.6 0 1340.9 2228 2328.2 1473 1347.4 1495.5 0 1191.2 1596 848.01 0 1141.7 0 1954.4 2357.9 821.24 1545.1 0 1387.3 2148.7 2280.9 1526.6 1352.3 1495.3 0 1145.5 1497.5 1 0 1 0 1 1 1 1 0 1 1 1 1 1 1 0 1 1 2904900 23458 1818 22007 44076 35471 35471 1 9606 Homo sapiens -0.019037435344216647 RQTEEAIDR Unmodified 1116.5523 0.55234972 2442 B3KY37;B7Z765;Q9UL01 DSE Dermatan-sulfate epimerase yes no 0 0 1 1 0 1 27.929 27.929 3 0.0049003 5187 20230619_1880_Aki_TMTPro18x_K_F1 82.831 41.126 8729.1 5367.8 6493 5571.1 8007.8 13159 9001.3 9999.5 13070 8700.5 17130 17532 11264 16474 11451 8503 21947 19112 8041.9 4923.1 6805.6 5710.9 8272.6 12646 9145.6 10392 13208 9145.4 17126 17354 11748 16585 12201 9279.3 20878 18051 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2321600 23459 2442 22008 44077 35472 35472 1 9606 Homo sapiens -0.001264360271534315 RQTIEER Unmodified 930.48829 0.4882929 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 2.5 0.5 1 1 23.049 23.161 3 0.042602 3787 20230619_1882_Aki_TMTPro18x_K_F3 63.486 19.091 184330 97607 205070 223820 278010 277660 239450 269590 267180 200840 287050 326280 252170 217750 271140 196510 381040 259660 170230 90507 207770 216110 281690 276300 244630 274090 271100 210470 292370 321680 259520 227030 280960 201640 362670 246400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151150000 23460 3152 22009 44078;44079 35473 35473 1 9606 Homo sapiens 0.02026828606574327 RQTILPSCSYEDK Unmodified 1595.7614 0.76135622 3214 O00451;O00451-2;O00451-3;E5RGR6;B4DS89 GFRA2 GDNF family receptor alpha-2 yes no 0 0 1 7.5 0.5 1 1 43.032 43.077 3 8.7168E-08 10513 20230619_1887_Aki_TMTPro18x_K_F7 151.22 128.22 29284 24034 29369 26420 76040 86649 35166 30017 38602 41524 56365 81892 47921 54294 78054 55509 74586 98849 27080 22027 30504 27223 74228 81743 37930 34879 39890 42614 56861 80265 50698 56954 78531 58246 71565 93339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48919000 23461 3214 22010 44080;44081 35474 35474 1 9606 Homo sapiens -0.012694005760522487 RQTSGGPVDASSEYQQELER Unmodified 2236.0356 0.035616823 3476 Q6IB54;P18859;P18859-2;Q6NZ59;A8MUH2 ATP5J ATP synthase-coupling factor 6, mitochondrial yes no 0 0 1 2.5 0.5 1 1 40.65 40.716 3 5.8399E-55 10131 20230619_1881_Aki_TMTPro18x_K_F2 279.47 256.15 98218 61856 63258 93212 64962 100580 86405 104330 129690 142870 126450 203900 184940 152930 82923 210740 216620 254680 90421 56941 67415 91577 68322 101120 87221 107320 129690 144130 132820 202290 182180 162540 94208 212860 206230 241290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 533400000 23462 3476 22011 44082;44083 35475 35475 1 9606 Homo sapiens -0.03295956073816342 RQVAGSVGGNTGVR Unmodified 1356.7222 0.72220902 3959 Q24JP5-4;Q24JP5;Q24JP5-2 TMEM132A Transmembrane protein 132A yes no 0 0 1 2.5 0.5 1 1 29.227 29.314 3 0.0016792 5340 20230619_1882_Aki_TMTPro18x_K_F3 73.299 48.082 19037 12767 17459 19343 27947 23906 23445 23971 24148 22014 27227 22828 25402 21643 22051 24879 27528 25052 17571 11749 18028 19046 28023 23838 23921 24425 24679 22380 27678 23124 25827 22536 22799 24952 26268 23802 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29430000 23463 3959 22012 44084;44085 35476 35476 1 9606 Homo sapiens 0.058116799752724546 RQVAPGAPSAPR Unmodified 1205.6629 0.66290322 4248 Q8ND56-3;Q8ND56-2;Q8ND56;A0A140TA76;K7EMZ9 LSM14A Protein LSM14 homolog A yes no 0 0 1 3 0 1 29.692 29.785 3 0.025404 5536 20230619_1882_Aki_TMTPro18x_K_F3 58.32 40.847 18509 11598 24516 28047 31845 31863 26548 35286 27036 21731 32727 31968 23329 26591 28745 18534 33142 31139 17136 10755 24531 26991 32309 31979 27123 35428 27708 22991 32903 31806 24412 27162 29319 19498 31654 29450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9972700 23464 4248 22013 44086 35477 35477 1 9606 Homo sapiens 0.06829828751756395 RQVDQLTNDK Unmodified 1215.6208 0.62076364 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8 VIM;HEL113 Vimentin yes no 0 0 1 5 0.816 1 1 1 37.328 37.396 3 6.3946E-06 8501 20230619_1886_Aki_TMTPro18x_K_F6 160.72 116.4 633770 361670 579490 496200 1448300 1493000 979940 1066300 1388800 986120 1219200 1246500 1208600 1077500 1051800 728170 1333100 1162300 584510 332730 605740 502720 1423100 1424100 1027100 1115100 1384000 1010100 1258300 1246900 1227000 1098900 1085800 762970 1271600 1100000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2300600000 23465 3414 22014 44087;44088;44089 35478;35479 35479 2 9606 Homo sapiens 0.02157808552692586 RQVGPQSGEVR Unmodified 1211.6371 0.6370824 948 Q59EP6;K7EPZ6;B4DI41;A8K654;A0A0A0MS90;B4DUR3;A0A994J7H0;Q9UIS9-8;Q9UIS9-7;Q9UIS9-6;Q9UIS9-5;Q9UIS9-11;Q9UIS9-10;Q9UIS9-2;Q9UIS9;Q9UIS9-9;Q9UIS9-12;Q9UIS9-4 MBD1 Methyl-CpG-binding domain protein 1 yes no 0 0 1 6 0 1 26.881 26.916 3 0.00010308 4698 20230619_1886_Aki_TMTPro18x_K_F6 120.77 81.752 8573 6139.1 5097.7 7911.9 9976 9126.5 8882.9 12975 11550 6122.8 8387.1 7923.4 8828.8 8415.7 5882.4 8367.2 9184.9 8195.2 7894.4 5638 5556.3 7860.2 9945.3 9225.2 9103.5 12791 11470 6613.8 8765.3 7991.4 8867.5 8656.2 6228.9 8393.6 8749.3 7789.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12576000 23466 948 22015 44090 35480 35480 1 9606 Homo sapiens 0.03972934509465631 RQVILLHTELER Unmodified 1505.8678 0.86781062 4281 Q8WVC6 DCAKD Dephospho-CoA kinase domain-containing protein yes yes 0 0 1 8 0 1 41.438 41.435 4 1.1382E-18 10055 20230619_1888_Aki_TMTPro18x_K_F8 240.59 166.61 35612 24463 26130 31444 29193 32890 29426 27734 40744 36571 41671 59939 38723 42003 36208 45620 54422 63285 32824 22470 27408 31188 30140 33030 30003 28953 40887 37203 42701 59107 39581 44075 37923 46742 51956 59889 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43121000 23467 4281 22016 44091 35481 35481 1 9606 Homo sapiens 0.13511142771449158 RQVLEGEEIAYK Unmodified 1433.7514 0.75144346 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 0 1 5 0.816 1 1 1 45.718 45.787 3 3.7159E-07 11951 20230619_1885_Aki_TMTPro18x_K_F5 158.11 120.79 561080 384280 468820 508340 378480 464640 531450 587590 695190 684750 730670 782890 801010 717950 541700 854140 849150 866060 517580 353080 482880 502720 405240 475800 532250 594260 700270 689740 751010 788180 803500 749710 574100 855880 809600 822400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1098200000 23468 1473 22017 44092;44093;44094 35482;35483 35483 2 9606 Homo sapiens 0.05191779480924197 RQVLIRPCSK Unmodified 1255.7183 0.71830961 3065;2214 H3BN98;I3L246;H3BV27;H3BT37;I3L303;I3L3P7;B2R4W8;P62244;A8K7H3 RPS15A;hCG_1994130 40S ribosomal protein S15a no no 0 0 2 8 0 1 34.723 34.715 3 0.0047846 7357 20230619_1888_Aki_TMTPro18x_K_F8 90.149 67.057 58054 52706 61291 48518 61396 37502 52634 62495 42857 44772 44222 31707 36976 25568 35592 38823 38393 13106 53742 48215 61864 49309 63248 39454 53354 61609 44305 45739 44914 32632 37862 27271 36381 37366 36532 12813 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54994000 23469 3065;2214 22018 44095 35484 35484 1 9606 Homo sapiens 0.10067918947856924 RQVQSLTCEVDALK Unmodified 1645.8458 0.84575455 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;B0YJC5 VIM;HEL113 Vimentin yes no 0 0 1 7 0 1 51.436 51.514 3 1.0079E-11 14251 20230619_1887_Aki_TMTPro18x_K_F7 179.33 149.78 165540 129340 148340 131090 251370 298720 241370 215850 240940 246190 242940 243300 282580 233640 245460 278150 230470 242020 152890 118480 153650 134470 252830 287410 243770 226890 245750 247190 250920 246850 285280 243660 249620 276720 220740 230210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3018699999.9999995 23470 3414 22019 44096 35485 35485 1 9606 Homo sapiens 0.04866550240694778 RQVSIEEGER Unmodified 1201.6051 0.60511357 342 P20340;A0A024R5J5;P20340-2;A0A024R5H8;Q6FGX3;Q53ET8;P20340-4;B7Z5Z9;Q53S08 RAB6A;RAB6C Ras-related protein Rab-6A yes no 0 0 1 1.5 0.5 1 1 30.32 30.354 3 7.8793E-05 5828 20230619_1881_Aki_TMTPro18x_K_F2 135.8 92.167 70712 41639 56810 70952 53150 78004 57743 68758 107380 82670 95941 105910 103110 83171 70011 100990 109550 113900 65164 38405 58911 69266 55919 78034 59506 71243 106030 83572 99280 105680 103450 87509 74127 101820 104460 108030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 288450000 23471 342 22020 44097;44098 35486;35487 35487 2 9606 Homo sapiens 0.01237522035648908 RQVSIEEGERK Unmodified 1329.7001 0.70007659 342 P20340;A0A024R5J5;P20340-2;A0A024R5H8;Q6FGX3;Q53ET8;P20340-4;B7Z5Z9;Q53S08 RAB6A;RAB6C Ras-related protein Rab-6A yes no 0 0 2 4.5 0.5 1 1 32.119 32.19 4 0.00062934 6430 20230619_1885_Aki_TMTPro18x_K_F5 94.122 77.348 350760 218400 258140 306440 331830 339780 293280 347610 424510 368290 413180 471610 461190 412770 309580 482170 530960 458760 323150 200890 271250 302570 338110 341220 302100 355010 424500 374340 426690 472060 462360 431150 330600 481630 505380 436240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 693160000 23472 342 22021 44099;44100 35488;35489 35489 2 9606 Homo sapiens 0.04841455506834791 RQVSVEEAK Unmodified 1044.5564 0.55637247 3091 H7C3P7;P11233 RALA Ras-related protein Ral-A yes no 0 0 1 4.5 0.5 1 1 33.908 33.977 3 0.021257 7162 20230619_1885_Aki_TMTPro18x_K_F5 64.792 34.603 55233 25804 62328 66349 88896 111190 70738 83739 107370 61392 90727 130580 91508 85586 93926 51387 118710 130600 50990 23999 63162 64147 89907 108270 73520 86817 106470 65427 94178 127680 93568 87994 96590 56761 113420 123160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71384000 23473 3091 22022 44101;44102 35490 35490 1 9606 Homo sapiens 0.03587653466570373 RQVVELQNR Unmodified 1140.6364 0.63635412 3041 Q86VS8;H0YDM4 HOOK3 Protein Hook homolog 3 yes no 0 0 1 5.33 3.09 1 1 1 32.273 32.306 3 0.00013819 6440 20230619_1888_Aki_TMTPro18x_K_F8 115.06 88.617 65418 44201 50801 69776 67099 76017 67558 75562 94035 51262 65181 57489 56320 56625 55229 60053 70181 58595 60312 40700 53185 68385 68520 76334 68885 76565 92978 53387 67786 58121 57802 58572 57027 60207 66924 55712 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 50568000 23474 3041 22023 44103;44104;44105 35491;35492 35492 2 9606 Homo sapiens 0.07166139860419207 RQYENHIFVGSK Unmodified 1476.7474 0.74736113 4001 Q9BUN6;Q53H77;Q53GN7;Q9NP92 MRPS30 28S ribosomal protein S30, mitochondrial yes no 0 0 1 2 0 1 38.794 38.861 4 0.0041872 9298 20230619_1881_Aki_TMTPro18x_K_F2 72.265 53.207 114720 82861 100200 123990 114950 145130 120070 122140 166530 148250 157210 140500 142050 137370 104550 166200 166320 167840 105890 76223 103380 122010 118630 144530 122190 127060 166590 148290 160880 142970 143860 143270 110730 166450 158550 159390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165670000 23475 4001 22024 44106 35493 35493 1 9606 Homo sapiens 0.028057347778030817 RRDDASCFGGK Unmodified 1267.5728 0.57276759 2756 C9JJX6;E9PDC3;O00192-2;O00192;B9EH95;Q8NAH4 ARVCF Armadillo repeat protein deleted in velo-cardio-facial syndrome yes no 0 0 2 7.5 0.5 1 1 32.057 32.106 4 0.00047077 6177 20230619_1887_Aki_TMTPro18x_K_F7 105.46 88.024 16978 10771 17145 21594 30300 24770 26995 28061 32561 22488 27750 28156 27456 25425 25819 28260 30282 32500 15679 9954.8 17622 20939 30278 24883 27567 28286 32632 23213 28688 28248 27975 26460 26544 28584 28946 30816 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25887000 23476 2756 22025 44107;44108 35494 35494 1 9606 Homo sapiens -0.05031588639008078 RRDDGLSAAAR Unmodified 1186.6167 0.61668131 3769 P84101-4;P84101;F8WBN3;B9A031;C9JQZ0;B8ZZY7;F8WBV6;P84101-3;P84101-2 SERF2 Small EDRK-rich factor 2 yes no 0 0 2 5.5 0.5 1 1 23.134 23.188 3 7.6602E-12 3837 20230619_1886_Aki_TMTPro18x_K_F6 169.65 115.9 165980 129490 146920 149150 169400 190080 149060 159250 211870 108610 114790 83523 101550 80686 113280 116680 128770 82594 153290 118750 151160 149570 173830 188400 153400 163420 208100 111960 121560 86043 104660 85223 115840 114770 122730 78979 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174790000 23477 3769 22026 44109;44110 35495;35496 35496 2 9606 Homo sapiens 0.030837638496677755 RRDEDMLYSPELAQR Oxidation (M) 1893.9003 0.90030932 638 B4DMD3;B4DY34;A0A024RAW9;Q9Y2W2 WBP11 WW domain-binding protein 11 yes no 0 1 2 3.5 0.5 1 1 37.402 37.45 4 1.2876E-10 8558 20230619_1882_Aki_TMTPro18x_K_F3 157.35 138.94 145530 113690 129730 127900 149840 155280 148410 141120 184730 167620 206070 220500 199870 172220 182110 207180 240530 213270 134410 104230 133380 128400 154020 154680 150850 145890 186900 169620 210230 219800 203410 181040 188840 207910 229380 202600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 63957000 23478 638 22027 44111;44112 35497;35498;35499 35498 378 3 9606 Homo sapiens -0.010884826784831603 RRDEMLGLVPMR Oxidation (M) 1487.7701 0.77008719 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7 RAD50 DNA repair protein RAD50 yes no 0 1 2 2 0 1 40.181 40.253 4 0.06239 9908 20230619_1881_Aki_TMTPro18x_K_F2 45.357 24.128 25152 23178 26842 25949 28113 33292 29258 30685 38518 29940 30971 36002 35129 26750 34229 32303 42747 37418 23289 21236 27144 26085 29160 33046 29722 31501 38396 30496 32351 35942 35672 28211 35277 32664 40781 35505 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9858400 23479 4309 22028 44113 35500 35500 2725 1 9606 Homo sapiens 0.045712945794093685 RREEEGLQLR Unmodified 1284.6898 0.68984626 3632 Q5BKZ2;P52294;C9JYI4;C9J352;C9JWD9;F2Z3G4;C9J4U1 KPNA1 Importin subunit alpha;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes no 0 0 2 4 0 1 29.102 29.172 3 0.035278 5250 20230619_1883_Aki_TMTPro18x_K_F4 57.532 0 7691.5 5799.7 6264.6 7981.1 8508.4 7762.4 7303.5 7334 9826.3 8853.7 9247.1 12169 10359 9728.2 10079 7631.4 11062 11086 7097.7 5329 6523.6 7873.7 8623.3 7859.9 7510.9 7566.7 9846.3 8969.2 9584.3 12101 10531 10003 10293 7906 10574 10493 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57626000 23480 3632 22029 44114 35501 35501 1 9606 Homo sapiens 0.05888892572284021 RREEEMMIR Oxidation (M) 1264.6016 0.60162487 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 1 2 3.5 0.5 1 1 23.096 23.205 3 0.066237 3806 20230619_1882_Aki_TMTPro18x_K_F3 46.001 45.862 113610 89889 138620 131170 200430 159260 175040 163200 168070 138330 161880 156270 160540 132240 164200 132240 204240 151390 105230 82632 139560 129440 201990 159110 177710 165800 171320 141700 166340 157020 164080 137240 168900 134080 194670 143790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 225200000 23481 1450 22030 44115;44116 35502 35502 943 1 9606 Homo sapiens -0.02009187334215312 RREEEMMIR Unmodified 1248.6067 0.60671025 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 2 4 0 1 30.875 30.939 3 0.0089326 5883 20230619_1883_Aki_TMTPro18x_K_F4 74.533 56.474 16818 10229 18725 15707 19695 21180 17884 19420 18712 36429 35564 39417 40801 30213 30044 34477 35133 33911 15541 9420.5 18856 15485 20322 20960 18190 20400 19770 35957 35938 39528 40924 31711 31044 34538 33557 32219 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104440000 23482 1450 22030 44117 35503 35503 1 9606 Homo sapiens -0.007648834715837438 RREEEMR Unmodified 1004.4822 0.48216167 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;H7C367 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 2 1.5 0.5 1 1 22.965 23.001 3 0.0068475 3738 20230619_1881_Aki_TMTPro18x_K_F2 121.62 62.638 64020 34359 87707 85454 109080 109650 88646 103340 88990 66114 97259 103150 82130 78239 85210 38697 111070 86485 59252 31907 87414 82325 110900 108810 90657 104980 90871 69942 98792 102100 84521 79444 87741 42370 105850 81727 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 50591000 23483 1112 22031 44118;44119 35504;35505 35505 2 9606 Homo sapiens -0.019900128966014563 RREEEVSGVSDPQPQDAGSR Unmodified 2198.0312 0.031200147 1122 A0A0S2Z5B2;O00257 CBX4 E3 SUMO-protein ligase CBX4 yes no 0 0 2 2 0 1 30.522 30.588 4 2.3339000000000002E-29 5943 20230619_1881_Aki_TMTPro18x_K_F2 197.09 176.5 2964.7 2668.8 1725.5 2530.3 2511.1 3404 1723.7 3271.2 4611.6 4145.9 5008.5 5499.7 4493 3877.7 5350.5 4827.9 4419.9 6353.4 2733.6 2442 1872.4 2578.7 2540.3 3372.7 1876.1 3369.2 4547.9 4184.5 5101 5465 4641.6 4104.9 5372.3 4922.7 4251.3 6011.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16922000 23484 1122 22032 44120 35506 35506 1 9606 Homo sapiens -0.01989420496738603 RREEGPPPPSPDGASSDAEPEPPSGR Unmodified 2670.227 0.22699942 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;Q6NSG3;Q58F29;Q6P169;C9JR83;C9JWF0;C9IYK2;C9JJ64 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein no no 0 0 2 2 0 1 33.159 33.217 4 2.1195E-08 6934 20230619_1881_Aki_TMTPro18x_K_F2 97.542 93.471 1476.4 979.44 906.23 1602.1 3067.8 3354.5 2605 2323 3463.3 2350.5 2133 2282.1 2304.2 2791.7 2821.8 909.92 3433.2 3683.2 1359.2 902.34 1005.6 1586.3 3005.5 3233.9 2674.8 2443.9 3425 2376.7 2261 2332.3 2378 2765.1 2883 1106 3280.7 3468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23570000 23485 4593 22033 44121 35507 35507 1 9606 Homo sapiens -0.04130499833445356 RREELFIEQK Unmodified 1346.7306 0.73064844 66 H7C2B1;A0A024QZW2;Q9UMY1-2;Q9UMY1 NOL7 Nucleolar protein 7 yes no 0 0 2 6.5 0.5 1 1 40.236 40.314 4 7.4922E-07 9624 20230619_1886_Aki_TMTPro18x_K_F6 172.27 80.408 226430 169390 202910 229040 224880 240150 239940 233820 278000 244880 257280 245310 281350 215340 246620 295160 281730 266080 209080 155620 208560 226490 232280 241840 242210 239650 280180 246970 265900 248170 284610 227410 253590 293550 269110 253090 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 276430000 23486 66 22034 44122;44123 35508;35509;35510 35508 3 9606 Homo sapiens 0.07115233891886419 RREPGAPPDPETPAVR Unmodified 1743.9016 0.90162994 1393 H0YAN8;A0A2X0U4L4;O15013-7;O15013-4;O15013-5;O15013-6;O15013 ARHGEF10 Rho guanine nucleotide exchange factor 10 yes no 0 0 2 4.33 0.471 2 1 31.196 31.267 3;4 2.2018E-05 6094 20230619_1883_Aki_TMTPro18x_K_F4 98.408 84.395 9130.4 6864.8 13352 12845 18264 18051 15780 19934 19155 11375 15531 17586 14582 13125 20235 7893.5 17416 12386 8470.7 6333.1 13282 12544 18491 17891 16166 19989 19150 12149 16091 17405 15184 13407 20249 8312.8 16656 11735 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39099000 23487 1393 22035 44124;44125;44126 35511;35512 35511 2 9606 Homo sapiens 0.05943519472521075 RREPLPSLEAVYLITPSEK Unmodified 2197.2107 0.21066806 1274 P61764-2;P61764;A0A1B0GVQ5;A0A1B0GWF2;A0A1B0GTP9;A0A0D9SG72;A0A2R8Y5D4;B7Z2V7;A0A994J7L2;A0A1B0GW76;A0A0D9SEP9;A0A0D9SFW6;A0A0D9SFQ7;A0A0D9SEH5 STXBP1 Syntaxin-binding protein 1 yes no 0 0 2 2 0 1 56.008 56.026 4 8.2271E-15 17022 20230619_1881_Aki_TMTPro18x_K_F2 164.53 147.04 59321 45099 55213 60257 36285 41019 45574 41660 44890 61156 64646 68120 67767 56705 71688 76263 71869 84645 54796 41423 56163 59350 39447 42960 45445 43098 46617 60937 65580 68455 69235 59920 72868 76770 68850 80260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190140000 23488 1274 22036 44127 35513 35513 1 9606 Homo sapiens 0.15995115529176474 RRFPEEPHVPLEQR Unmodified 1788.9383 0.9383498 4267 V9HWF3;Q8TCD5;A0A384NYP3;J3KSX6;J3KRC4;Q8TCD5-2 HEL74;NT5C 5'(3')-deoxyribonucleotidase, cytosolic type yes no 0 0 2 6.5 0.5 1 1 36.298 36.362 5 8.9038E-05 8091 20230619_1886_Aki_TMTPro18x_K_F6 102.33 88.213 83063 64409 75677 86178 94468 91101 105040 97421 104270 77080 75916 74338 78492 57566 80451 82833 89069 79476 76724 59156 77836 85295 96802 91907 105220 98569 105070 78927 79359 75063 80086 61313 82258 82636 85071 75558 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77487000 23489 4267 22037 44128;44129 35514;35515 35515 2 9606 Homo sapiens 0.07543816089105349 RRGEDMMHPLK Oxidation (M) 1384.6704 0.67037314 409 A0A024R6S1;O60884;T2DN57;A0A087WT48 DNAJA2 DnaJ homolog subfamily A member 2 yes no 0 1 2 8 0 1 29.939 29.954 4 0.050129 5603 20230619_1888_Aki_TMTPro18x_K_F8 48.004 17.176 16034 7517.7 14464 14661 18460 17325 16436 17425 21271 11989 13033 11926 15436 12064 13677 10099 15835 13667 14775 6956.9 14880 14244 18792 17313 16836 17645 21043 12424 13857 12118 15592 12348 14036 10393 15115 12952 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15906000 23490 409 22038 44130 35516 35516 260 1 9606 Homo sapiens -0.00657523034510632 RRGETESEEFEK Unmodified 1495.6903 0.69029976 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;C9J813;B4E3I0 CALD1 Caldesmon yes no 0 0 2 2 0 1 32.442 32.502 3 0.00098803 6716 20230619_1881_Aki_TMTPro18x_K_F2 96.059 68.197 13407 13405 15274 17713 21949 24131 16637 17774 21600 17028 22165 20936 18455 17186 17142 23264 22841 22709 12428 12299 15474 17606 22132 23766 17240 18575 21730 17382 22539 20970 18908 18161 17804 23230 21798 21575 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18290000 23491 3798 22039 44131 35517 35517 1 9606 Homo sapiens -0.03771777289216516 RRLDDQESPVYAAQQR Unmodified 1930.9609 0.96093574 1882 A0A994J7C7;Q96ST3;H3BMA2;A0A994J4B2;H3BT34;H3BQ76;H3BQ88;H3BNA0;H3BNZ3;H3BQL7;H3BP90 SIN3A Paired amphipathic helix protein Sin3a yes no 0 0 2 6 0 1 33.949 33.996 4 3.7884E-08 7239 20230619_1886_Aki_TMTPro18x_K_F6 136.17 102.86 6186.7 5342.9 5709.3 6957.5 6514.8 8536.1 10923 7540.8 9475.5 7954.1 9949.7 6808.5 9915.2 7903.6 6990.9 7736 9845.9 8608.5 5719 4903.7 5865.8 6911 6825.4 8484.2 10699 7791.8 9741.6 7988.8 10161 7013.1 9979.4 8113.9 7321 7824.2 9384.3 8171.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7372500 23492 1882 22040 44132 35518 35518 1 9606 Homo sapiens 0.03269370696102669 RRLDECEEAFQGTK Unmodified 1737.8104 0.81043168 180 V9HWJ8;A0A024R203;P61289;P61289-3;P61289-2;K9J957;Q6FHK7;B3KQ25;K7ESG5;K7ENH2;K7EMD0;K7EPX6;K7EKR3 HEL-S-283;PSME3 Proteasome activator complex subunit 3 yes no 0 0 2 4.5 0.5 1 1 39.271 39.338 4 1.7333E-08 9264 20230619_1883_Aki_TMTPro18x_K_F4 154.72 126.44 175240 126530 148410 149870 168880 179640 176080 180340 205370 195870 166950 141190 213480 141690 172590 222070 186870 161500 161710 116100 153300 149870 174040 179440 178010 184510 206160 195490 174940 146020 214220 150540 177270 218320 178480 154120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1333100000 23493 180 22041 44133;44134 35519;35520 35519 2 9606 Homo sapiens -0.028961122871123735 RRLEEESAQLK Unmodified 1357.7314 0.73137672 4729 Q9Y3P9;B7Z2B4 RABGAP1 Rab GTPase-activating protein 1 yes no 0 0 2 5.5 0.5 1 1 36.568 36.648 4 0.00056874 8225 20230619_1886_Aki_TMTPro18x_K_F6 100.69 51.689 26537 21768 24128 29713 32303 35319 31641 27711 37852 33486 37618 39467 40472 32094 35148 40145 45578 39681 24520 19993 24869 29406 32899 35112 32117 29007 38192 33732 38740 39546 40958 33779 36434 40173 43467 37715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96650000 23494 4729 22042 44135;44136 35521 35521 1 9606 Homo sapiens 0.06682028540944884 RRNDLDDPER Unmodified 1284.6171 0.61707524 3931 Q15393;A8K6V3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 2 1 0 1 23.138 23.138 3 0.00014546 3803 20230619_1880_Aki_TMTPro18x_K_F1 140.24 108.6 43369 22356 53109 58178 85410 75552 69683 81273 69471 56871 86641 87993 47784 64076 62853 37195 95337 79646 40084 20785 53639 55970 85544 75174 71199 81941 71373 59706 86410 87048 50907 65397 65288 40281 90795 75256 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144230000 23495 3931 22043 44137 35522 35522 1 9606 Homo sapiens -0.013848612211631917 RRPDLDEIHR Unmodified 1305.6902 0.69018061 3215 O00488;A9J4F5 ZNF593 Zinc finger protein 593 yes no 0 0 2 5 0 1 29.857 29.933 4 0.0038272 5664 20230619_1885_Aki_TMTPro18x_K_F5 84.06 57.387 18112 14723 20217 22412 25401 22995 22634 32011 25842 23904 37854 47479 34640 33490 28544 36040 46823 49629 16763 13540 20446 22010 25856 23414 23116 31844 26597 25282 38187 46642 35208 35123 30183 36912 44642 46984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12226000 23496 3215 22044 44138 35523 35523 1 9606 Homo sapiens 0.04956312292097209 RRPEIGGELGGPR Unmodified 1392.7586 0.75859452 1868 Q4QQH3;A0A994J7G2;A0A994J7E1;E9PB98;A0A994J4U7;P32418-2;P32418-3;P32418-4;P32418-5;P32418 SLC8A1 Sodium/calcium exchanger 1 yes no 0 0 2 8 0 1 32.638 32.638 4 0.00013514 6581 20230619_1888_Aki_TMTPro18x_K_F8 106.32 72.362 31911 22377 39923 41301 50050 39641 42217 51435 43503 39558 51301 58380 51935 55535 50338 35544 63030 58067 29543 20646 40027 40119 50823 40488 43103 51397 44547 41174 52352 58272 52993 56293 51826 37363 60150 54931 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19953000 23497 1868 22045 44139 35524 35524 1 9606 Homo sapiens 0.07792556871982015 RRPESAPAESSPSK Unmodified 1497.7536 0.75356872 1387 A0A8I5QJD1;A0A8I5KY52;Q59GG9;A0A8I5QJ77;Q53SF8;G5E9C8;A0A3G1LBG1;A0A2X0SG47;Q07889 SOS1 Son of sevenless homolog 1 yes no 0 0 2 6 0 1 28.234 28.266 4 7.7212E-05 5185 20230619_1886_Aki_TMTPro18x_K_F6 102.5 74.208 6990.1 4590 8352.6 9303.6 10216 10828 7645.7 9772.5 9210.8 6366.6 10663 14503 12069 10787 14587 5889.3 12237 13121 6466 4242.3 8402.8 9017.9 10391 10801 7917.1 9965.7 9341.9 6866 10968 14209 12391 10993 14610 6432 11737 12383 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9887500 23498 1387 22046 44140 35525 35525 1 9606 Homo sapiens 0.024602082186902408 RRPFIEQVGLVYVR Unmodified 1730.9944 0.99440812 582 B0AZM4;A8K6F0;A0A024R9L1;O60306;H0YH15 AQR Intron-binding protein aquarius yes no 0 0 2 8 0 1 48.424 48.49 4 0.051143 12945 20230619_1888_Aki_TMTPro18x_K_F8 50.108 37.017 12301 10403 11531 14093 14878 14959 13699 12807 17403 14357 14003 14158 14137 10312 14029 15590 14831 17088 11371 9552.6 11842 13933 15154 15014 13990 13279 17381 14428 14535 14253 14410 11054 14322 15658 14198 16206 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19379000 23499 582 22047 44141 35526 35526 1 9606 Homo sapiens 0.1581506899658507 RRPGGWVEK Unmodified 1083.5938 0.59376103 3387 P05023;P05023-4;P05023-3 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 2 3.5 0.5 1 1 33.662 33.721 4 0.051482 7069 20230619_1883_Aki_TMTPro18x_K_F4 58.433 29.057 29530 19468 33968 33644 42238 40247 41612 45397 52541 38720 43353 47897 47624 37778 42065 39410 58245 43553 27307 17949 34255 32888 43152 40304 42329 45825 52503 39781 45127 47848 48210 39400 43740 39825 55470 41377 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137960000 23500 3387 22048 44142;44143 35527 35527 1 9606 Homo sapiens 0.05530789522822488 RRPPSPEPSTK Unmodified 1250.6731 0.67313356 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 2 1.5 0.5 1 1 28.6 28.638 4 0.021405 5152 20230619_1881_Aki_TMTPro18x_K_F2 66.267 19.069 7008.5 5054.1 6944.2 7830.5 6532.4 9167.6 7647.4 8106.3 10551 7145.4 12046 13634 9387.1 10822 13707 7804.4 15219 15826 6475.3 4651.2 7061.2 7691.9 6868.4 9134.9 7738.6 8332.4 10619 7476.9 12191 13443 9891.4 11091 13912 8358.9 14551 14944 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6672200 23501 2337;3778;3779 22049 44144;44145 35528 35528 1 9606 Homo sapiens 0.057823916863071645 RRPQPYPYPSK Unmodified 1387.7361 0.73606817 4510 Q9H3N1;B4DZX7 TMX1;TXNDC Thioredoxin-related transmembrane protein 1 yes no 0 0 2 7 0 1 34.473 34.549 4 0.00030194 7094 20230619_1887_Aki_TMTPro18x_K_F7 113.69 84.881 94200 75988 95494 102120 119770 144350 118060 113120 126310 73807 82707 64650 64975 57021 90924 81225 95597 55072 87106 69783 97328 101480 122520 141970 119350 116670 126300 76540 86074 65923 68162 60305 92191 79816 91141 52733 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55376000 23502 4510 22050 44146 35529;35530 35529 2 9606 Homo sapiens 0.05770957474373972 RRPYWEK Unmodified 1033.5457 0.5457482 2721 B8ZZV5;Q8TCC3-3;Q8TCC3;Q8TCC3-2 MRPL30 39S ribosomal protein L30, mitochondrial yes no 0 0 2 4.5 0.5 1 1 34.799 34.868 4 0.03422 7492 20230619_1883_Aki_TMTPro18x_K_F4 77.741 14.176 112250 87968 104870 125450 138300 139450 156190 147910 167770 90444 104450 94719 88229 78679 113860 105200 114850 66761 103710 80848 107790 123750 141380 140120 156680 149010 167440 94730 109440 95548 91850 82998 115320 103200 109540 63993 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59946000 23503 2721 22051 44147;44148 35531 35531 1 9606 Homo sapiens 0.03031715602787699 RRQEEWEK Unmodified 1159.5734 0.57341951 411 H3BN22;Q6P4H7;H3BSF0;H3BQQ6;H3BTI2;H3BTP8;H3BSY6;H3BP64;H3BUL4;H3BMX9;A0A024R6T8;Q9GZU8;Q2VIL1 FAM192A;NIP30 Protein FAM192A yes no 0 0 2 4.5 0.5 1 1 31.24 31.311 4 0.0046963 6146 20230619_1885_Aki_TMTPro18x_K_F5 92.051 46.97 162660 117760 148650 161290 186940 190050 191890 192770 228720 182450 190060 180570 207460 161370 160170 175050 222700 154040 150190 108210 152820 159660 191220 190050 194270 196430 229280 184960 197470 182770 208910 167860 167200 174510 212000 146780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112360000 23504 411 22052 44149;44150 35532;35533 35533 2 9606 Homo sapiens 1.5740723711132887E-05 RRQEIEQK Unmodified 1085.5942 0.59415496 4506 Q9H307;A8K964 PNN Pinin yes no 0 0 2 6 0 1 26.853 26.888 4 0.025651 4714 20230619_1886_Aki_TMTPro18x_K_F6 70.816 15.446 23485 9181.3 35283 34573 59705 54195 43978 50108 34438 19171 43928 39238 28293 30815 42731 9409.3 44556 35517 21735 8631.8 35212 33031 59504 53180 44986 50622 35920 21649 43940 38646 30098 30927 43106 11376 42551 33490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13476000 23505 4506 22053 44151 35534 35534 1 9606 Homo sapiens 0.05478164452051715 RRSEVVESTTESQDK Unmodified 1749.8493 0.8493196 4071 Q5UIP0-2;Q5UIP0 RIF1 Telomere-associated protein RIF1 yes no 0 0 2 3 0 1 30.294 30.387 4 4.3665E-06 5757 20230619_1882_Aki_TMTPro18x_K_F3 107.61 81.891 6848.7 7207.9 7667.8 6095.8 12503 9758 8645.1 9212.6 8526.2 5193.4 8552.3 5394.8 7565.3 5953.1 8081.3 7022.1 8919.5 6371 6350.4 6586.7 7778.5 6306.1 12464 9592.8 8939.6 9335.8 8682.7 5476.3 8711.2 5507.9 7774.4 6180.3 8247.8 7007.2 8508.4 6067.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10475000 23506 4071 22054 44152 35535 35535 1 9606 Homo sapiens 0.004388915483104938 RRTDPECTAPIK Unmodified 1442.73 0.72999651 4223 Q8N1G2;Q5T7F5 CMTR1 Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 yes no 0 0 2 7 0 1 32.292 32.385 4 0.0018877 6267 20230619_1887_Aki_TMTPro18x_K_F7 87.618 47.186 12516 11942 13364 10837 18096 17575 15372 19901 16165 12209 17622 17370 16256 14372 15223 18057 18103 18579 11592 10922 13558 11143 18327 17324 15696 19942 16464 12905 17950 17319 16591 15112 15674 18107 17297 17639 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12828000 23507 4223 22055 44153 35536 35536 1 9606 Homo sapiens 0.026340711805232786 RRTEEGPTLSYGR Unmodified 1520.7696 0.76955314 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 2 7.5 0.5 1 1 30.256 30.315 4 2.0224E-16 5777 20230619_1888_Aki_TMTPro18x_K_F8 182.89 149.61 53638 59037 60996 60106 81714 74770 70617 74551 74450 51323 65165 50936 54552 45082 63235 46111 63696 47986 49761 54018 61638 60849 82789 74554 71974 75532 75179 53132 66759 51592 56419 46763 64072 46490 60831 45615 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51610000 23508 1059 22056 44154;44155 35537;35538 35538 2 9606 Homo sapiens 0.02999914455608632 RSAAEMYGSSFDLDYDFQR Oxidation (M) 2272.9695 0.96951109 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;P07910-4;G3V5X6;G3V3K6;G3V251;G3V2D6 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 1 1 5 0.816 1 1 1 53.31 53.367 3 1.5259E-13 15184 20230619_1885_Aki_TMTPro18x_K_F5 160.02 150.97 429520 370880 394640 467590 440580 407660 464100 420910 443960 483750 579890 604800 552110 505600 557350 640610 544790 638310 397030 340280 404830 463430 453930 417350 466030 431150 458910 489060 587640 605310 564760 531660 566490 641220 522020 605950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1732599999.9999998 23509 2226 22057 44156;44157;44158 35539;35540;35541 35540 1388 3 9606 Homo sapiens -0.11605488240275008 RSAAEMYGSSFDLDYDFQR Unmodified 2256.9746 0.97459647 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;P07910-4;G3V5X6;G3V3K6;G3V251;G3V2D6 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 1 6 0 1 56.235 56.309 3 1.4309E-86 16557 20230619_1886_Aki_TMTPro18x_K_F6 309.83 295.96 128160 109860 125950 135030 97252 125260 133700 115720 130480 147800 130700 168660 163630 152500 157770 180760 161230 178630 118520 100770 127780 134180 104370 127170 132600 119850 133260 148270 135840 169610 165780 159260 160860 181010 154350 169620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2796800000 23510 2226 22057 44159 35542 35542 1 9606 Homo sapiens -0.1036118437764344 RSAEDELAMR Unmodified 1176.5557 0.55572054 1922 A3KFL5;Q13868;B4E001;A0A8I5KV47;A0A8I5KVY3;A3KFL2;Q13868-3;Q13868-2;A0A8I5QL34;B3KQW2 EXOSC2 Exosome complex component RRP4 yes no 0 0 1 2 0 1 35.109 35.165 3 2.2361E-05 7756 20230619_1881_Aki_TMTPro18x_K_F2 125.72 107.91 23652 16272 21946 20879 27102 26787 23501 23145 27223 24749 27616 29324 29516 25918 24646 30233 27530 31113 21836 14946 22500 20786 27631 26563 24024 23939 27541 25074 28406 29449 29839 27070 25339 30346 26337 29528 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12071000 23511 1922 22058 44160 35543 35543 1 9606 Homo sapiens -0.025495092448181822 RSAEEEAADLPTKPTK Unmodified 1741.8846 0.88464248 4283 Q8WW12;Q8WW12-2 PCNP PEST proteolytic signal-containing nuclear protein yes no 0 0 2 4 0 1 41.519 41.562 4 0.00015318 10198 20230619_1883_Aki_TMTPro18x_K_F4 94.203 76.286 66448 52121 63941 56722 69932 68990 67542 67746 76774 79289 95892 85177 86392 75798 81270 91954 82538 81806 61407 47771 65194 57111 72050 68847 68560 69588 78446 79688 96990 85946 88229 79318 82864 91557 78954 77810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142070000 23512 4283 22059 44161 35544 35544 1 9606 Homo sapiens 0.04337554076050765 RSAELPDAVGPIVQLQEK Unmodified 1949.0582 0.058190166 4388 Q96PU8-5;Q96PU8-9;Q96PU8-8;Q96PU8-6;Q96PU8-3;Q96PU8;F5GXS8;F5GYM3;F5H5U6;F5H8C8;H0YG47;F5GYT7 QKI Protein quaking yes no 0 0 1 7 0 1 55.101 55.162 3 4.1093E-05 15801 20230619_1887_Aki_TMTPro18x_K_F7 94.01 68.793 32940 27460 30178 40307 39775 43401 56766 40695 38971 72641 57800 56793 76795 60931 44201 79917 80190 87321 30441 25240 31114 39658 40950 43586 55651 42644 41633 71172 59217 58514 76224 63779 47704 80295 76427 82834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 417190000 23513 4388 22060 44162 35545 35545 1 9606 Homo sapiens 0.12162339852375226 RSAPSGLVR Unmodified 941.54066 0.54066282 3963 Q96E39;Q2VIN3 RBMXL1 RNA binding motif protein, X-linked-like-1 yes no 0 0 1 3.5 0.5 1 1 29.102 29.188 3 0.024255 5257 20230619_1883_Aki_TMTPro18x_K_F4 63.283 37.345 46401 40767 48617 49988 70837 70771 61004 65075 83881 39592 52642 50363 52729 63836 46918 42696 54973 45859 42942 37391 49539 49997 71531 69863 62758 66170 82762 41824 55461 51125 53686 64195 48227 43464 52457 43557 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30982000 23514 3963 22061 44163;44164 35546;35547 35547 2 9606 Homo sapiens 0.0675541174019827 RSASPDDDLGSSNWEAADLGNEER Unmodified 2590.1168 0.11678027 2936 E9PM92;O00193;E9PQA1 C11orf58;SMAP Small acidic protein yes no 0 0 1 1 0 1 48.01 48.01 3 1.2848E-34 13564 20230619_1880_Aki_TMTPro18x_K_F1 208.65 186.64 8845.2 10205 15600 11083 8891.8 11679 11772 13076 13979 15585 17651 11463 14273 13351 15865 13771 12194 13316 8251.5 9341 15159 11146 9842.7 11796 11791 13320 14260 15490 17749 11908 14750 13731 15891 13815 11710 12648 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148330000 23515 2936 22062 44165 35548 35548 1 9606 Homo sapiens -0.1146734489238952 RSATDLCGR Unmodified 1034.4927 0.49272635 1130 Q53H36;A0A0S2Z5J9;Q96SZ6-2;Q96SZ6-6;Q96SZ6-3;Q96SZ6;H0Y721;A0A0S2Z592;Q96SZ6-4 CDK5RAP1 CDK5 regulatory subunit-associated protein 1 yes no 0 0 1 6 0 1 28.01 28.042 3 0.014846 5113 20230619_1886_Aki_TMTPro18x_K_F6 58.699 46.986 11546 6755.1 13674 11217 15027 16593 15201 15626 17797 12037 17138 14001 13877 13789 14513 7518.3 21368 18346 10673 6228.5 13720 11031 15503 16339 15400 15927 17927 12430 17452 14119 14317 13909 15083 8285.1 20358 17322 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3636400 23516 1130 22063 44166 35549 35549 1 9606 Homo sapiens -0.023140302421552406 RSATSTSASPTLR Unmodified 1333.695 0.69499121 3291 O75061-4;O75061;O75061-2 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes no 0 0 1 2 0 1 27.944 28.018 3 0.02967 5003 20230619_1881_Aki_TMTPro18x_K_F2 54.276 30.289 3762.8 3353.2 5179.6 4964.1 4084.6 4474.4 4033.1 4258.7 5203.1 4829.5 6395.8 5771.2 4118.1 5833.6 5459.4 4313.8 7816 5859.3 3492.1 3081.7 5124.9 4873.6 4325.9 4555.8 4111.2 4382.9 5276.4 4881 6403.4 5817.9 4357.5 5926.2 5650.6 4451.1 7442 5556 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4493100 23517 3291 22064 44167 35550 35550 1 9606 Homo sapiens 0.04149151644242011 RSCPSFSASSEGTR Unmodified 1527.6736 0.67360384 2847 D6RCP9;F5CTF3;D6RFG8;P27707;D6RG38 DCK Deoxycytidine kinase yes no 0 0 1 7.5 0.5 1 1 30.784 30.841 3 2.6353E-16 5642 20230619_1887_Aki_TMTPro18x_K_F7 174.95 152.71 27333 22006 24601 24653 21174 25115 26989 27809 35053 25011 27977 28310 26584 27897 23922 34266 33915 29748 25251 20173 25170 24701 22454 25424 27125 28149 34928 25548 28975 28599 27103 29091 24980 34050 32324 28318 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 93392000 23518 2847 22065 44168;44169 35551;35552 35551 2 9606 Homo sapiens -0.06912601446811095 RSDEDYLYREELAQFHR Unmodified 2226.0454 0.045393648 1810 P16435;Q59ED7;A8K3B4;B2R6E5;Q63HL4;A0A8V8NE24;H0Y4R2;B4DJI8;B4DDH3;B4DKM8;E7EMD0;B4E305 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase yes no 0 0 2 4 0 1 46.169 46.213 5 2.2452E-25 12261 20230619_1883_Aki_TMTPro18x_K_F4 179.14 168.35 16977 18129 22633 18572 15155 20951 21046 23313 24786 26863 23095 21984 24632 19229 21489 27572 26470 23453 15771 16590 22390 18774 16513 21057 21012 23732 24988 26801 23833 22451 24937 20375 22214 27324 25258 22331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120030000 23519 1810 22066 44170 35553 35553 1 9606 Homo sapiens -0.01858723277791796 RSDLYAVEMK Unmodified 1210.6016 0.6016081 4576 V9HW91;Q9NQR4 HEL-S-8a;NIT2 Omega-amidase NIT2 yes no 0 0 1 6.5 0.5 1 1 45.501 45.588 3 2.5849E-05 11564 20230619_1887_Aki_TMTPro18x_K_F7 144.1 102.7 152000 107960 145460 159450 169780 198600 171110 151870 196540 152150 150770 154310 154410 147330 143710 176650 186360 195970 140380 99302 148770 157190 174590 196690 173160 158460 196880 153980 157040 156360 157160 153730 148870 178020 177970 185890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278940000 23520 4576 22067 44171;44172 35554 35554 1 9606 Homo sapiens 0.004731359374318345 RSDPAAFESR Unmodified 1134.5418 0.54178503 2162 A8MRA7;I3L448;Q5TC12;H0YDD6 ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1 yes no 0 0 1 4 0 1 31.416 31.48 3 0.00015184 6111 20230619_1883_Aki_TMTPro18x_K_F4 112.7 83.745 39416 26007 38869 38397 48420 46529 43289 47808 65406 40578 54065 43106 50158 42986 40604 41297 58904 44920 36399 23930 39660 37862 49389 46462 44629 48537 64827 41530 55734 43691 50886 44261 42463 41736 56085 42678 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42843000 23521 2162 22068 44173 35555 35555 1 9606 Homo sapiens -0.020104186815842695 RSDPNFK Unmodified 862.42972 0.42971539 269 A0A024R3W2;Q15388 TOMM20 Mitochondrial import receptor subunit TOM20 homolog yes no 0 0 1 7.5 0.5 1 1 33.719 33.758 3 0.0027004 6811 20230619_1887_Aki_TMTPro18x_K_F7 113.5 59.347 104860 54371 138360 145740 189400 173950 153560 182880 160790 99356 163460 181100 141320 142330 164940 68557 167950 158240 96994 50579 138530 139870 191340 173840 157240 183930 163240 107410 166810 178690 146190 144170 166920 75449 160590 149380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51146000 23522 269 22069 44174;44175 35556;35557 35556 2 9606 Homo sapiens -0.007002279679113599 RSDSFPER Unmodified 992.46756 0.46755746 1299 A0A1U9X839;A0A1U9X830;P18615;P18615-3;H9ZYJ1;A0A0A0MSN9;B7Z6T4;P18615-4;E9PD43;A0A0A0MT02 NELFE;NELF-E;RDBP Negative elongation factor E yes no 0 0 1 3 0 1 28.83 28.932 3 0.0033057 5228 20230619_1882_Aki_TMTPro18x_K_F3 101.65 55.184 16222 14960 15584 17637 19503 22618 19385 21471 23732 13774 20168 21599 17546 16899 19747 14443 27593 20712 15007 13713 15958 17657 19960 22462 19687 21804 23744 14586 20760 21410 18121 17451 20440 14924 26277 19631 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7114900 23523 1299 22070 44176 35558 35558 1 9606 Homo sapiens -0.02897761773090224 RSECNMCNTPK Unmodified 1395.5693 0.56933847 3347 O95218-2;O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes no 0 0 1 6.5 0.5 1 1 31.631 31.697 3 4.5426E-05 5978 20230619_1887_Aki_TMTPro18x_K_F7 125.54 101.94 34615 21433 42468 43597 58881 69237 46372 51861 52294 45425 58276 57378 60899 48294 46967 31898 69715 55096 32019 19816 42744 42485 59545 67608 47691 53982 53166 46638 59601 57361 61398 49297 49162 33676 66382 52138 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35031000 23524 3347 22071 44177;44178 35559;35560 35560 2 9606 Homo sapiens -0.1126234279952314 RSEEEEAPPDGAVAEYR Unmodified 1903.8548 0.85479891 1750 A0A8I5KPF6;A0A8I5KY88;A0A8I5KQK1;A0A8I5KP46;A0A8I5KZ67;A0A8I5KX65;A0A8I5KST0;Q6UX04-2;Q6UX04 CWC27 Peptidyl-prolyl cis-trans isomerase CWC27 homolog yes no 0 0 1 1 0 1 37.047 37.047 3 6.097300000000001E-31 8794 20230619_1880_Aki_TMTPro18x_K_F1 241.11 222.03 23204 19710 24884 27500 26779 33356 32807 29993 33931 36696 39862 39706 41878 34939 32266 38465 46793 44961 21474 18104 25193 27197 27845 33191 32759 31057 34749 36817 40697 40007 42227 36399 33813 38942 44618 42642 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101120000 23525 1750 22072 44179 35561 35561 1 9606 Homo sapiens -0.060974296599169975 RSEGFSMDR Unmodified 1083.4767 0.47674194 4171 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7ERA4 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 0 0 1 4.5 0.5 1 1 32.619 32.688 3 0.0049052 6612 20230619_1883_Aki_TMTPro18x_K_F4 76.143 53.403 92297 83423 92728 96157 117250 117860 110840 108210 122230 102210 123710 124680 112400 101080 108560 107520 138710 120020 85403 76460 94539 96363 119580 117350 112480 111060 123860 104340 126380 124750 114960 105370 112110 108660 132290 113940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 66969000 23526 4171 22073 44180;44181 35562;35563 35562 2 9606 Homo sapiens -0.06165736479078987 RSEKPPAGSICR Unmodified 1356.6932 0.69321707 3663 Q6PJJ2;P56182;Q53FR7;Q96J73;B4DZM3 RRP1 Ribosomal RNA processing protein 1 homolog A yes no 0 0 2 2.5 0.5 1 1 30.221 30.302 4 0.033269 5823 20230619_1881_Aki_TMTPro18x_K_F2 60.55 43.918 84380 77256 86745 97200 130770 137870 103240 126710 113050 47109 65934 65509 50924 47547 85303 36021 80784 55037 78100 70866 88635 97033 131550 136050 106020 128010 112530 52517 69284 65092 54138 49024 85598 37617 77159 52167 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96357000 23527 3663 22074 44182;44183 35564 35564 1 9606 Homo sapiens 0.029138193546259572 RSELEEQQMHLNVGLR Oxidation (M) 1953.9691 0.96905758 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 1 4.5 0.5 1 1 39.522 39.589 4 0.060312 9348 20230619_1885_Aki_TMTPro18x_K_F5 47.568 29.43 149410 108550 121330 145700 143570 151320 147040 155380 148070 167300 178000 187310 172930 169820 146230 193070 209120 199900 137850 99723 126050 144120 147450 152680 148140 158760 152080 168990 181050 188650 175600 176870 152890 193890 199410 189820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206620000 23528 3881 22075 44184;44185 35565 35565 2558 1 9606 Homo sapiens 0.030231816212108242 RSELEEQQMHLNVGLR Unmodified 1937.9741 0.97414296 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 4.5 0.5 1 1 43.185 43.247 4 8.28E-15 10893 20230619_1885_Aki_TMTPro18x_K_F5 188.04 155.86 82859 52591 74640 91594 70730 91525 73333 85939 90752 92193 84597 105030 94439 91971 97448 112900 110360 94725 76447 48503 76554 89208 74006 92333 74384 88343 91281 93222 87682 105550 96322 96308 99830 112070 105360 90220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187490000 23529 3881 22075 44186;44187 35566 35566 1 9606 Homo sapiens 0.04267485483819655 RSELIAK Unmodified 815.4865 0.48650199 1789 A0A8J8YYJ1;Q01105-3;A0A8I5KS71;B2RCX0;A0A024R895;Q5VXV3;A0A0C4DFV9;Q01105-4;Q01105-2;Q01105;P0DME0 SET;SETSIP Protein SET;Protein SETSIP yes no 0 0 1 4.5 3.04 1 1 1 1 37.031 37.059 3 0.0024312 8770 20230619_1880_Aki_TMTPro18x_K_F1 125.31 42.643 1113200 632290 875110 1046800 1162100 1253400 1127400 1306400 1525600 1231800 1481400 2176300 414890 1964900 394820 2347000 384000 1626400 1025500 583060 914100 1025100 1184500 1252300 1151200 1328700 1527700 1278200 1479200 2159000 467450 2044000 413150 2306500 366160 1547900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2 3 4829700000 23530 1789 22076 44188;44189;44190;44191 35567;35568 35567 2 9606 Homo sapiens 0.07137819588615457 RSELSQDAEPAGSQETK Unmodified 1831.8548 0.85479891 2653 B4E343;Q9BVJ6;Q9BVJ6-3;Q9BVJ6-2;X6RJY0 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 0 0 1 3 0 1 35.982 36.039 3 1.3339E-06 7977 20230619_1882_Aki_TMTPro18x_K_F3 108.96 86.744 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23531 2653 22077 44192 35569 35569 1 9606 Homo sapiens -0.027854296599116424 RSEPQPEEGSPAGGQK Unmodified 1652.7754 0.77542638 4759 Q9Y6K1;Q59HC6;F8WE91;Q9Y6K1-3 DNMT3A DNA (cytosine-5)-methyltransferase 3A yes no 0 0 1 2.5 0.5 1 1 31.741 31.811 3 1.8098E-14 6301 20230619_1882_Aki_TMTPro18x_K_F3 178.03 175.02 13163 7083.9 17211 17389 15561 16539 12199 17741 17147 12498 22515 24938 22411 19110 19751 11900 26880 24087 12177 6576.6 17117 16687 16199 16797 12681 17899 17374 13290 22855 24540 22752 19533 20477 12785 25630 22759 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20931000 23532 4759 22078 44193;44194 35570;35571 35571 2 9606 Homo sapiens -0.024850318233802682 RSEVPCAPMPK Unmodified 1270.6162 0.61621231 4347 Q99575;Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 1 8 0 1 40.21 40.199 3 0.0023694 9575 20230619_1888_Aki_TMTPro18x_K_F8 80.69 58.157 71350 58123 71058 68264 70357 74673 76487 74717 89841 75532 71579 59788 69920 61093 71733 73723 80746 65799 65971 53302 72176 68220 73290 75043 77178 76343 90016 75850 74161 61503 71531 63643 73413 73441 77066 62635 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38679000 23533 4347 22079 44195 35572 35572 1 9606 Homo sapiens -0.00827115186075389 RSFEVEEVETPNSTPPR Unmodified 1972.949 0.94903365 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;B4DTL7;K7ENL0;K7EPY1;K7EJV0 SEPT9 Septin-9 yes no 0 0 1 3 0.816 1 1 1 42.507 42.569 3 1.879E-71 10673 20230619_1882_Aki_TMTPro18x_K_F3 261.59 252.01 147660 109400 141860 148430 135860 162910 159140 168030 167170 192210 210980 226920 225690 184360 187330 182530 227960 228470 136420 100520 144560 146870 142310 163690 159440 171930 171690 193920 215130 227200 227990 191570 193370 186070 217720 216510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 323340000 23534 541 22080 44196;44197;44198 35573;35574 35574 2 9606 Homo sapiens 0.001477091622291482 RSFSSQRPVVDR Unmodified 1432.7535 0.75350914 4040 Q5JSZ5;Q5H9R5;A0A804HJR4;A0A804HKC3 PRRC2B;DKFZp781F05101 Protein PRRC2B yes no 0 0 2 4 0 1 29.379 29.448 4 0.035202 5384 20230619_1883_Aki_TMTPro18x_K_F4 43.878 29.62 73011 51430 68453 75031 103620 113320 95271 86217 117190 62531 73255 74856 75510 61414 69465 59535 90159 67614 67418 47301 70494 74276 104660 111020 97134 89332 116230 64973 77337 74974 76732 63710 71815 60356 85907 64217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64332000 23535 4040 22081 44199 35575 35575 1 9606 Homo sapiens 0.054442530093410824 RSGAELALDYLCR Unmodified 1522.7562 0.75621126 4416 Q9BRJ6;C9JQV0;A0A024R836;H7C0T1;H7C2R9 C7orf50;MGC11257 Uncharacterized protein C7orf50 yes no 0 0 1 1 0 1 52.665 52.665 3 8.032E-11 15449 20230619_1880_Aki_TMTPro18x_K_F1 175.29 151.04 39882 39687 37854 36231 35630 34894 39266 39672 42797 49191 39712 33842 44670 29327 35770 46347 40162 35413 36912 36293 38571 36905 37252 35544 39503 40441 43336 48715 41060 34915 44954 31340 36829 45657 38351 33769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86043000 23536 4416 22082 44200 35576 35576 1 9606 Homo sapiens 0.01574340351999126 RSGASGASAAPAASAAAALAPSATR Unmodified 2140.0985 0.098491851 4179 Q7Z7K6 CENPV Centromere protein V yes yes 0 0 1 4.5 0.5 1 1 41.385 41.449 3 5.267E-27 10160 20230619_1883_Aki_TMTPro18x_K_F4 188.75 174.85 43365 37163 41166 46217 44143 55803 43798 39021 46214 45072 45187 44020 42832 38975 46153 39436 46105 44656 40094 34093 42082 46034 45667 55301 44257 41209 46915 45216 46314 44547 43963 40395 46832 39942 44103 42365 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 186280000 23537 4179 22083 44201;44202 35577;35578 35577 2 9606 Homo sapiens 0.07404654504898645 RSGEPQSDDIEASR Unmodified 1545.7019 0.70192708 3795 Q9BUI6;Q05086-3;A0A0D9SEJ2;A0A0D9SG54;A0A0D9SES7;A0A0D9SF91 UBE3A Ubiquitin-protein ligase E3A yes no 0 0 1 1 0 1 29.561 29.561 3 3.5326E-07 5829 20230619_1880_Aki_TMTPro18x_K_F1 139.66 110.68 6751.1 6136.5 6877.6 8414.2 8583.4 8416 6489 5597 9541.9 8309.5 9894.2 10036 10436 8771.4 9213.8 9430.5 9279.4 8976.2 6247.9 5634.2 7007.7 8303.4 8722.1 8448.8 6758.8 5993.6 9560.3 8312.8 10157 10066 10574 9122.5 9395.3 9442.3 8875.7 8531.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10090000 23538 3795 22084 44203 35579 35579 1 9606 Homo sapiens -0.0490958026584849 RSGQIEGVR Unmodified 1000.5414 0.5413911 1847 A0A8V8TPV5;A0A8V8TQZ3;Q8WWQ0;A0A8V8TQM4;A0A8V8TPK0 PHIP PH-interacting protein yes no 0 0 1 6 0 1 27.137 27.17 3 0.00068401 4788 20230619_1886_Aki_TMTPro18x_K_F6 98.048 54.278 10060 5614.6 11256 9242.8 13526 9516.5 9057.1 10895 15376 9314 12730 15394 12213 11903 11914 6279.4 16344 12187 9293.2 5177.5 11346 9042.2 13718 9643.6 9594.8 10991 15181 9691.8 13179 15212 12482 12093 12330 6753.6 15566 11528 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9716000 23539 1847 22085 44204 35580 35580 1 9606 Homo sapiens 0.041142063892380065 RSGQLGIQEEDLR Unmodified 1499.7692 0.76921879 3446 P13521;B4DQJ6 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 1 3.5 0.5 1 1 38.778 38.832 3 4.6768E-11 9117 20230619_1882_Aki_TMTPro18x_K_F3 183.23 155.49 50636 41666 51453 78105 34525 41199 84699 82397 84009 75441 95024 89076 78739 79244 69542 80953 87836 81825 46829 38426 52147 75346 38526 45337 82440 81197 85928 76992 96213 89511 80532 82089 71949 81355 83822 77730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201160000 23540 3446 22086 44205;44206 35581;35582 35581 2 9606 Homo sapiens 0.039324947357499695 RSGQLGIQEEDLRK Unmodified 1627.8642 0.86418181 3446 P13521;B4DQJ6 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 2 6 0 1 39.523 39.611 4 0.0055103 9370 20230619_1886_Aki_TMTPro18x_K_F6 71.354 47.934 44181 45799 46568 52028 45309 41104 55879 61717 61475 48864 58216 50493 57804 47407 52112 50763 56420 47469 40940 41953 47117 51923 47363 42900 55918 61274 62119 50116 59812 51126 58726 49183 53317 50790 53879 45154 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41025000 23541 3446 22087 44207 35583 35583 1 9606 Homo sapiens 0.07536428206935852 RSGQVLEVSGSK Unmodified 1245.6677 0.66771383 1233 A0A140VK65;P21281;Q59HF3;H0YC04 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes no 0 0 1 5.33 3.09 1 1 1 37.528 37.545 3 6.1628E-07 8979 20230619_1880_Aki_TMTPro18x_K_F1 150.26 111.12 167960 115840 146850 167140 178320 164070 157550 182990 220180 204170 254530 257560 230730 204820 199650 239760 291370 250390 154990 106540 151460 164500 182090 166620 162100 186160 222030 206810 258430 257290 234910 214790 208830 240870 277610 237860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 451730000 23542 1233 22088 44208;44209;44210 35584;35585 35584 2 9606 Homo sapiens 0.05470668103839671 RSGSGVNPYCGLIEEAYGLDK Unmodified 2284.0794 0.079395893 2495 B4DII5;B4DWX3;O60684 KPNA6 Importin subunit alpha;Importin subunit alpha-7 yes no 0 0 1 7 0 1 60.373 60.416 3 4.2397E-08 17980 20230619_1887_Aki_TMTPro18x_K_F7 110.4 101.8 45955 34885 41056 47469 35395 42660 36918 45335 52228 59384 55651 82282 84403 72768 42806 108260 93680 108580 42437 32049 42062 46832 37326 43551 37652 46505 52554 59944 58318 82164 83323 77230 47434 108010 89244 103070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34587000 23543 2495 22089 44211 35586 35586 1 9606 Homo sapiens -0.011280629010343546 RSGVAYIAAPSGSAADK Unmodified 1619.8267 0.82673367 3534;2560 B4DP06;V9HWH7;P31939;B2R7P8;P31939-2 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 1 3.67 3.09 1 1 1 41.508 41.532 3 2.795E-13 10479 20230619_1881_Aki_TMTPro18x_K_F2 147.84 119.54 118990 83659 94528 105590 100540 110910 101870 101060 110910 136390 143070 151660 146390 132940 119890 169370 161410 153710 109740 76820 98203 104890 104070 111540 102970 104890 113880 136370 145450 152640 148130 139590 124950 168600 153980 146190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 823070000 23544 2560;3534 22090 44212;44213;44214 35587;35588 35587 2 9606 Homo sapiens 0.041613369412971224 RSIADSEESEAYK Unmodified 1483.6791 0.67906638 919 B2RB99;B4DXL5;A0A0A0MQR2;Q9BY42 RTFDC1 Protein RTF2 homolog yes no 0 0 1 3 0 1 38.728 38.782 3 6.7584E-05 9104 20230619_1882_Aki_TMTPro18x_K_F3 110.25 62.28 25606 19330 27941 29847 23935 32712 29135 31674 37030 36036 34568 36937 42645 29262 33454 37336 43279 35195 23684 17785 28149 29302 25373 32807 29331 32538 37190 36210 35943 37185 42793 30894 34738 37260 41258 33481 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38393000 23545 919 22091 44215 35589 35589 1 9606 Homo sapiens -0.043425993833125176 RSIFASPESVTGK Unmodified 1377.7252 0.72522871 3322 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 0 0 1 2.5 0.5 1 1 46.606 46.684 3 6.5969E-05 12657 20230619_1882_Aki_TMTPro18x_K_F3 110.55 74.903 150510 137830 148560 146450 151620 184520 166480 167380 189700 178380 183000 169780 202220 156030 177500 199350 190470 194900 139260 126230 151140 147760 157800 183310 167740 172430 191690 179470 188820 172380 204490 163780 181760 199320 182150 185150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135440000 23546 3322 22092 44216;44217 35590;35591 35591 2 9606 Homo sapiens 0.051475103093935104 RSIQEELQQLR Unmodified 1398.7579 0.75792582 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 1 7 0 1 47.593 47.681 3 1.0454E-12 12492 20230619_1887_Aki_TMTPro18x_K_F7 210.79 150.19 170230 151230 165140 162610 194690 228940 239710 262640 282610 233270 211400 211190 261570 193670 231170 257150 217210 235880 157450 138530 168690 164290 201240 227210 240330 264960 282590 236690 222460 214900 263720 203840 234980 256120 208090 224200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342470000 23547 3921 22093 44218 35592;35593 35593 2 9606 Homo sapiens 0.07449717432268699 RSIQFVDWCPTGFK Unmodified 1739.8454 0.84536062 2408;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;P68366-2;P68366 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain no no 0 0 1 4.57 0.904 1 2 3 1 58.526 58.562 3;4 1.6799E-08 17278 20230619_1885_Aki_TMTPro18x_K_F5 147.51 133.03 441710 414240 413930 335360 320760 365200 337530 385690 358190 452800 422500 419580 431880 382130 377120 479780 466240 456300 408600 378560 420830 346260 341170 367920 340510 394180 366840 452750 430830 426210 438040 400520 389930 478960 445160 433680 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2302800000 23548 2408;3747 22094 44219;44220;44221;44222;44223;44224;44225 35594;35595;35596;35597 35596 4 9606 Homo sapiens 0.0050317531151904404 RSLEGGGCPAR Unmodified 1158.5564 0.55638924 793 A0A068F7M9;Q9Y613;B4E2D9 FHOD1 FH1/FH2 domain-containing protein 1 yes no 0 0 1 6 0 1 27.122 27.155 3 0.091237 4795 20230619_1886_Aki_TMTPro18x_K_F6 39.266 28.436 4862.1 3540.6 5893.1 5134 6955 6832.7 6811.6 7350.4 7537.7 6832.6 9162.5 8094.4 8718.4 8879.4 8264.1 6466.5 8886 11085 4500.6 3255.7 5911.6 5077.5 7126.6 6791.8 6902 7455.5 7697.4 6973.6 9297.8 8189.1 8899 9007 8436.2 6801.8 8511.3 10471 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2226700 23549 793 22095 44226 35598 35598 1 9606 Homo sapiens -0.016546698050888153 RSLGEPAAGEGSAK Unmodified 1328.6684 0.66844211 4443 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 yes yes 0 0 1 4.5 0.5 1 1 34.473 34.542 3 5.8277E-07 7354 20230619_1885_Aki_TMTPro18x_K_F5 135.55 102.55 82051 53300 72512 71762 83296 78757 85107 83646 104410 96500 107360 103970 109940 88299 92184 89048 113600 99308 75700 48994 74595 71057 85660 79247 86303 85454 105370 97074 110080 104650 111250 91678 95205 90074 108390 94267 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 126020000 23550 4443 22096 44227;44228 35599;35600 35600 2 9606 Homo sapiens 0.017254627529155186 RSLGYAYVNFQQPADAER Unmodified 2084.0076 0.007551579 566;1667 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2YQ90;A0A024R9E2;H0YBN4;E5RJB9;E5RGH3;E5RH24;E5RHG7;Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;B1ANR1 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 4 no no 0 0 1 8 0 1 48.286 48.353 3 2.6909E-15 12841 20230619_1888_Aki_TMTPro18x_K_F8 169.58 153.27 31090 29085 29175 29107 30000 24996 30238 29776 31354 33039 29807 29800 36042 29957 30142 40883 34234 30507 28760 26622 29795 29369 31039 25741 30519 30182 31849 33111 30928 30423 36307 31464 31038 40299 32689 29099 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137860000 23551 566;1667 22097 44229 35601 35601 1 9606 Homo sapiens 0.00890810527425856 RSLPEPAQR Unmodified 1052.5727 0.57269123 4594 Q9NU22;Q6AI22 MDN1;DKFZp686H16106 Midasin yes no 0 0 1 6.5 0.5 1 1 29.66 29.729 3 0.00095378 5233 20230619_1887_Aki_TMTPro18x_K_F7 87.066 62.722 63443 44681 63836 67413 68820 77267 62958 65287 69533 67674 91291 93254 88980 74355 77452 80530 98893 82812 58616 41110 64903 66304 70947 77081 64073 67607 71305 69044 92540 92876 90336 77633 80152 80960 94302 78690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19605000 23552 4594 22098 44230;44231 35602;35603 35603 2 9606 Homo sapiens 0.04850779423327367 RSLSEQPVMDTATATEQAK Unmodified 2062.0001 8.29396E-05 1299 A0A1U9X839;A0A1U9X830;P18615;P18615-3;H9ZYJ1;A0A0A0MSN9;B7Z6T4;P18615-4;E9PD43;A0A0A0MT02;A0A0G2JI50;B4DZZ3;A2ABK4 NELFE;NELF-E;RDBP Negative elongation factor E yes no 0 0 1 5 0 1 44.163 44.242 3 1.6624E-14 11307 20230619_1885_Aki_TMTPro18x_K_F5 153.25 148.25 22005 19397 19030 21231 22178 22875 24048 22124 25375 26436 22793 25255 25697 22928 29156 29627 29210 29490 20335 17771 19639 21318 22829 23002 24173 22774 25695 26449 23667 25607 26310 24079 29592 29655 27949 28010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62333000 23553 1299 22099 44232 35604 35604 1 9606 Homo sapiens 0.01156290144808736 RSMGGAAIAPPTSLVEK Unmodified 1683.8978 0.89779012 4084 Q5W009;Q96I25;Q5W011;Q5W010;Q5W012;H0Y6J6 RBM17 Splicing factor 45 yes no 0 0 1 3 0 1 48.907 48.984 3 5.4565E-05 13688 20230619_1882_Aki_TMTPro18x_K_F3 90.453 68.679 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23554 4084 22100 44233 35605 35605 1 9606 Homo sapiens 0.08319713654464067 RSPAWNETGR Unmodified 1172.5687 0.56866849 159 H0Y720;A0A024R1T4;Q9UPQ9-1;Q9UPQ9 TNRC6B Trinucleotide repeat-containing gene 6B protein yes no 0 0 1 7.5 0.5 1 1 31.303 31.314 3 0.0040373 6108 20230619_1888_Aki_TMTPro18x_K_F8 67.999 50.526 19643 14748 20024 20810 25352 24144 23203 24816 27075 24045 30687 23552 26840 21241 25631 20146 31714 22986 18157 13555 20389 20559 25826 24181 23648 25276 27490 24330 31096 23873 27448 21943 26385 20444 30225 21834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22993000 23555 159 22101 44234;44235 35606;35607 35607 2 9606 Homo sapiens -0.01071310070369691 RSPNVPGDFPDCPAGMLFAEEQAK Unmodified 2632.205 0.20500711 4347 Q99575;Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 1 6 0 1 60.217 60.274 3 1.0728999999999999E-19 18257 20230619_1886_Aki_TMTPro18x_K_F6 160.69 152.33 17377 15016 14114 14828 12318 16382 14661 14925 13216 21967 19211 16814 22391 21345 14864 22144 20363 24034 16049 13747 14588 15020 13025 16418 14614 15531 13828 21658 19544 17462 22410 21912 15592 22324 19456 22794 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50360000 23556 4347 22102 44236 35608 35608 1 9606 Homo sapiens -0.04580719107116238 RSPPIPLAK Unmodified 977.6022 0.60220045 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 1 4.5 0.5 1 1 42.467 42.53 3 0.00074573 10545 20230619_1885_Aki_TMTPro18x_K_F5 107.95 60.128 913680 687100 738140 792190 943230 1096500 1001400 954230 1105600 1022200 1189000 1147700 1167500 985630 1143200 1368900 1212000 1127300 843080 630200 768010 795410 965980 1082400 1009300 986380 1123400 1033500 1214900 1154900 1191100 1041800 1168000 1355300 1158400 1073600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1448300000 23557 909 22103 44237;44238 35609;35610 35610 2 9606 Homo sapiens 0.11250343439473909 RSPSAPAATSSASSSTSSYK Unmodified 1928.9076 0.90756276 808 Q53F69;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345;A0A087X0S7;Q562F1;B4DK79 LRRC41 Leucine-rich repeat-containing protein 41 yes no 0 0 1 2.5 0.5 1 1 35.022 35.08 3 5.7213000000000005E-30 7683 20230619_1881_Aki_TMTPro18x_K_F2 210.61 191.53 27799 20121 23654 26330 33429 38888 36899 30477 41199 35296 43264 44923 42998 41445 42273 50113 56056 49426 25655 18481 24547 26231 34068 38167 37105 31858 41781 35734 44297 45072 43909 43293 43799 50160 53455 46977 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 43651000 23558 808 22104 44239;44240 35611;35612 35611 2 9606 Homo sapiens -0.01973471597079879 RSPSKPLPEVTDEYK Unmodified 1744.8996 0.89956426 2662 B5BUB5;P05455;E7ERC4;E9PGX9;E9PFL9;Q9UMH7 SSB Lupus La protein yes no 0 0 2 7.5 0.5 1 1 43.359 43.404 4 0.028062 10709 20230619_1887_Aki_TMTPro18x_K_F7 59.513 44.359 107910 84360 102750 107710 91546 114480 105910 105000 115980 130670 133360 133410 147900 116130 114940 131060 140170 121290 99715 77439 104680 106940 96483 115000 106320 108620 118360 130740 136610 134690 148860 121180 118930 130890 133740 115370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 382640000 23559 2662 22105 44241;44242 35613;35614 35613 2 9606 Homo sapiens 0.05691045944081452 RSQAGVSSGAPPGR Unmodified 1325.68 0.68000985 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 3.67 3.09 1 1 1 23.134 23.171 3 4.4896E-09 3825 20230619_1880_Aki_TMTPro18x_K_F1 163.99 143.78 37360 24090 47228 46888 64817 69072 49310 62745 57489 42024 55462 69309 60186 49727 55093 34530 64984 57518 34576 22253 47409 45729 65483 67969 50915 63939 57987 44416 57302 68383 61028 51155 56534 36309 62029 54414 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152590000 23560 349;3906 22106 44243;44244;44245 35615;35616 35615 2 9606 Homo sapiens 0.03019704566895598 RSQIYGSR Unmodified 965.50428 0.50427732 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 1 4 1.41 1 1 1 1 1 24.619 24.698 3 0.040769 4666 20230619_1885_Aki_TMTPro18x_K_F5 62.582 45.486 39433 27844 44432 43233 60846 66586 55220 56681 61046 27485 34341 38597 31136 26105 38180 21894 37220 44031 36470 25628 44963 42679 61733 65297 56164 57794 60688 29734 36401 38242 32224 27148 38557 23356 35668 41562 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1297300000 23561 150 22107 44246;44247;44248;44249;44250 35617;35618 35618 2 9606 Homo sapiens 0.02014534843488036 RSQTFLEK Unmodified 1007.54 0.53999412 955 A0A0A0MSK5;Q5JTV8;Q5JTV8-3;J3KN66;H0Y4R4 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 0 0 1 1.5 0.5 1 1 39.255 39.288 3 0.0050538 9775 20230619_1880_Aki_TMTPro18x_K_F1 93.325 54.177 354580 263090 281510 370260 425490 484930 406520 417400 551880 411280 485050 483590 473790 431560 372440 546610 553740 486440 327120 241820 294800 366320 430620 479920 415270 430850 550830 418560 500110 486200 479530 452660 391450 543580 527600 462910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 315130000 23562 955 22108 44251;44252 35619;35620 35619 2 9606 Homo sapiens 0.03652572300461543 RSSDTSGNEASEIESVK Unmodified 1794.8232 0.82316443 1955 D6R9S4;Q09GN1;A5D8X7;A8K8D2;Q71F23-3;Q71F23 CENPU;MLF1IP Centromere protein U yes no 0 0 1 2 0 1 40.737 40.81 3 6.3384E-05 10176 20230619_1881_Aki_TMTPro18x_K_F2 87.388 61.522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23563 1955 22109 44253 35621 35621 1 9606 Homo sapiens -0.04245422413828237 RSSGAAPAPASASAPAPVPGGEAER Unmodified 2260.1196 0.11962122 1346 A0A2R8Y7W6;A0A994J6X4;A0A2R8YFC9;A0A2R8YFW8;A0A2R8YGN6;A0A2R8YCL5;A0A2R8Y4I8;E5KRP6;A0A2U3TZR0;E5KRP5;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0 SPAST Spastin yes no 0 0 1 5.5 0.5 1 1 35.501 35.572 3 1.1165E-19 7755 20230619_1885_Aki_TMTPro18x_K_F5 152.23 132.84 12324 9449.3 11238 12616 10520 15788 13577 14135 12081 17762 15173 13729 17021 13928 13591 15857 14793 16571 11382 8678.8 11510 12518 11096 15672 13472 14644 12545 17509 15492 14126 17144 14473 13960 15938 14154 15726 4 4 4 4 4 4 4 4 4 3 4 4 4 4 4 4 4 4 53033000 23564 1346 22110 44254;44255 35622;35623;35624;35625 35623 4 9606 Homo sapiens 0.039966198137335596 RSSGMSSLLGK Unmodified 1121.5863 0.58629239 4659 Q9UEE9;B2R9W9 CFDP1 Craniofacial development protein 1 yes no 0 0 1 5 0 1 44.127 44.206 3 0.019781 11305 20230619_1885_Aki_TMTPro18x_K_F5 59.496 52.608 100560 73988 96285 98335 114940 110330 114600 114970 126320 103870 125710 113480 126590 101670 116950 117600 132170 113940 92895 67963 98442 97471 117780 110790 115940 116830 127920 105890 128960 114460 128680 106120 119920 117730 126190 108330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57435000 23565 4659 22111 44256 35626 35626 1 9606 Homo sapiens 0.030362691402615383 RSSITEPEGPGGPNIQK Unmodified 1765.8959 0.89587586 1510 A0A3B3ISJ2;Q96KQ4;B3KN04;H0YJL1 PPP1R13B Apoptosis-stimulating of p53 protein 1 yes no 0 0 1 6 0 1 41.338 41.433 3 2.7232E-13 10144 20230619_1886_Aki_TMTPro18x_K_F6 148.41 125.03 25223 13954 16818 21679 24879 25394 22559 23900 27593 28102 31996 30475 31811 22682 22179 33091 34210 32111 23212 12859 17930 21290 25156 25358 23036 24626 28007 28242 32585 30580 31994 24222 23446 32995 32601 30518 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24092000 23566 1510 22112 44257 35627 35627 1 9606 Homo sapiens 0.043563761702444026 RSSPAAFINPPIGTVTPALK Unmodified 2036.1419 0.14186022 4336 Q96DI9;Q9BY77;F6VRR5;B4E0L0;Q9BY77-2;F8WCX5;Q659C6;B4DSH9;Q6R954;Q8WUT1 POLDIP3;DKFZp434G0310;PDIP46 Polymerase delta-interacting protein 3 yes no 0 0 1 6 0 1 56.708 56.78 3 3.5144E-11 16823 20230619_1886_Aki_TMTPro18x_K_F6 127.01 108.64 84053 65818 71755 80954 80358 89435 90212 86946 101900 91705 100060 86642 111670 91711 95584 117130 112610 102750 77606 60395 74106 80620 83095 89737 90734 89128 103060 92313 103160 88477 112830 95782 98533 116440 107510 97782 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62045000 23567 4336 22113 44258 35628 35628 1 9606 Homo sapiens 0.16523496020067796 RSSSEDAESLAPR Unmodified 1403.6641 0.66408501 1769 Q4G0J3-3;A0A8I5KUI4;Q4G0J3;A0A8Q3SHG9;A0A8Q3SHN7;H0YA82;A0A8Q3SHF1;A0A8Q3SHH4;A0A8Q3WK75;A0A8I5KSZ3;A0A8I5KQG7;A0A8I5KYN2 LARP7 La-related protein 7 yes no 0 0 1 2.5 0.5 1 1 32.292 32.361 3 3.7746E-06 6597 20230619_1881_Aki_TMTPro18x_K_F2 110.44 80.749 16604 11245 10733 15222 17739 16422 16750 18803 22459 13105 20426 19900 19821 21408 17967 21806 23585 24348 15292 10336 11521 15056 17844 16572 17117 18890 22433 13776 21020 19970 20200 22032 18635 22039 22517 23096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95464000 23568 1769 22114 44259;44260 35629 35629 1 9606 Homo sapiens -0.021600464606763126 RSSTSSEPTPTVK Unmodified 1375.6943 0.69432251 1554 B2RMV2;A0A494C1J1;Q69YQ0-2;Q69YQ0;F8WAN1 CYTSA;SPECC1L;SPECC1L-ADORA2A Cytospin-A yes no 0 0 1 7 0 1 32.935 33.022 3 0.017492 6550 20230619_1887_Aki_TMTPro18x_K_F7 80.312 58.439 2188.6 2423.3 4425.2 4989.6 5621 5350.3 5016.7 4444.1 7708.8 5228.9 5780.8 6402.1 6710.6 3760.6 5178 3824.5 8392.2 6572.9 2045.3 2236 4330.1 4826.4 5719.6 5360.3 5173 4627.3 7617.7 5283 6064 6348.7 6737.5 3982.7 5460.4 3999.8 7985.9 6220.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10711000 23569 1554 22115 44261 35630 35630 1 9606 Homo sapiens 0.021503122045032796 RSSVLTQVNQLK Unmodified 1371.7834 0.78341229 4288 Q8WXH0-2;Q8WXH0;D4YW74;G3V5X4;A0A0C4DGK3;Q8WXH0-7;G3V4T3;Q68DP1 SYNE2;TROPH;DKFZp686H1931 Nesprin-2 yes no 0 0 1 5 0 1 45.29 45.368 3 0.00085631 11788 20230619_1885_Aki_TMTPro18x_K_F5 91.093 47.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23570 4288 22116 44262 35631 35631 1 9606 Homo sapiens 0.112391919547008 RSTCTINYSK Unmodified 1228.587 0.58702067 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GTJ4;A0A1B0GV49 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 1 3 0 1 35.444 35.501 3 0.00079821 7744 20230619_1882_Aki_TMTPro18x_K_F3 96.24 63.509 67282 39561 58785 60671 89769 85871 78120 88628 84759 52059 66154 58345 62291 52140 71549 41728 74956 54195 62039 36439 60887 59851 90395 84970 79646 89313 85127 54802 68559 58766 64141 53460 72601 42907 71540 51418 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171040000 23571 1415 22117 44263 35632 35632 1 9606 Homo sapiens -0.01812936210717453 RSTDFTSR Unmodified 968.46756 0.46755746 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 1 6.5 1.12 1 1 1 1 26.892 26.949 3 0.00044107 5146 20230619_1886_Aki_TMTPro18x_K_F6 134.25 73.565 196040 120690 196980 206230 272720 238040 215820 246450 272480 216110 264130 277300 255910 225500 244120 147840 299570 252190 181000 111300 201110 201550 275350 238510 222750 250300 273910 221950 271110 276710 260970 230310 250930 156020 285770 238600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 303120000 23572 3246 22118 44264;44265;44266;44267 35633;35634;35635;35636 35634 4 9606 Homo sapiens -0.017937617730922284 RSTITSR Unmodified 819.45626 0.45626449 73;721;4226 U3KQK0;A0A024QZZ7;A0A024RCJ9;A0A024RCL8;B2R4S9;B4DR52;I6L9F7;Q5QNW6-2;Q99879;Q99877;Q5QNW6;P62807;P58876;O60814;Q93079;Q99880;P57053;Q0D2M2;A0A024RCJ2;Q16778;P33778;P23527;P06899;Q6DRA6;Q6DN03;Q8N257 HIST1H2BN;HIST1H2BD;HIST1H2BK;HIST1H2BI;HIST1H2BM;HIST2H2BF;HIST1H2BC;HIST1H2BH;HIST1H2BL;H2BFS;HIST1H2BJ;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST2H2BD;HIST2H2BC;HIST3H2BB Histone H2B;Histone H2B type 2-F;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B type 1-H;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Putative histone H2B type 2-D;Putative histone H2B type 2-C;Histone H2B type 3-B no no 0 0 1 3.6 2.42 1 1 1 1 1 23.034 23.1 2 0.028547 3785 20230619_1881_Aki_TMTPro18x_K_F2 109.36 25.259 408240 201950 685150 605520 969360 822150 616270 929640 468560 304030 773040 951090 357940 583480 848390 149800 907410 741580 378680 188400 676300 580720 971790 816930 638810 924790 496630 359780 762760 922730 403670 590100 853310 193040 866480 698690 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 992390000 23573 73;721;4226 22119 44268;44269;44270;44271;44272 35637;35638;35639 35637 3 9606 Homo sapiens 0.03931460923422492 RSTTLDAGNIK Unmodified 1174.6306 0.63060004 1683 A0A8Q3SIG7;A0A8V8TM87;A0A8V8TM61;F5H578;A0A7N4I394;O75400-2;O75400;O75400-3;B4DPY2 PRPF40A Pre-mRNA-processing factor 40 homolog A yes no 0 0 1 4.5 3.5 1 1 38.35 38.343 3 5.4473E-13 8794 20230619_1888_Aki_TMTPro18x_K_F8 175.51 120.91 197770 145440 172620 193770 234880 250480 224340 210760 292040 207300 242850 213250 237380 201700 198200 262880 280110 213810 182560 133600 178510 192370 238860 248050 228770 217980 291440 210120 250980 216090 240700 211590 207090 260270 266760 203840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 296280000 23574 1683 22120 44273;44274 35640;35641 35641 2 9606 Homo sapiens 0.05026996558058272 RSTTQVADSGYQR Unmodified 1467.7066 0.70661853 4113 Q6NX51;Q96A65;B7Z321;Q8TAR2;Q96A65-2 EXOC4 Exocyst complex component 4 yes no 0 0 1 6 0.816 1 1 1 26.845 26.913 3 0.00082255 5333 20230619_1886_Aki_TMTPro18x_K_F6 89.231 77.365 18198 13207 16571 17162 22094 21156 20095 18650 26289 23137 26626 26319 24261 21637 23692 23529 27765 29985 16803 12129 17051 17056 22447 21041 20563 19349 26434 23250 27195 26411 24819 22578 24326 23976 26541 28403 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38855000 23575 4113 22121 44275;44276;44277 35642;35643 35642 2 9606 Homo sapiens -0.008526513324341067 RSTVAQLVK Unmodified 1000.6029 0.60292873 3504 V9HW26;P25705;P25705-2;P25705-3;K7ENJ4 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 1 4 0 1 40.894 40.937 3 0.001293 9919 20230619_1883_Aki_TMTPro18x_K_F4 96.113 40.546 275140 214510 174380 183250 423320 596320 325690 404010 938000 41076 47389 61294 53918 50680 78551 52558 61363 60244 253570 196230 189530 193020 420050 566810 351920 415650 882380 63724 90694 61242 56502 52698 78346 53306 58870 57143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150380000 23576 3504 22122 44278 35644 35644 1 9606 Homo sapiens 0.10265138088516323 RSVGELPSTVESLQK Unmodified 1628.8733 0.87334951 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 1 7.5 0.5 1 1 48.015 48.088 3 6.4419E-08 12646 20230619_1888_Aki_TMTPro18x_K_F8 137.17 69.034 38947 31118 31210 36325 47803 44389 42991 46839 53403 42472 45301 45627 49864 38287 55960 46947 50280 52884 35948 28537 32619 36368 48180 44354 43937 47542 53475 43265 47084 45939 51005 40223 56433 47398 48181 50157 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 875990000 23577 673 22123 44279;44280 35645 35645 1 9606 Homo sapiens 0.08406776772585545 RSVMDATQIAGLNCLR Unmodified 1803.9084 0.90837158 3544 P34932;V9HW33;Q59GF8;B4DUS3;B4DIZ3;O14992;Q7KYN0 HSPA4;HEL-S-5a;HS24/p52;HS24/P52 Heat shock 70 kDa protein 4 yes no 0 0 1 4 0 1 52.286 52.309 3 0.021781 15064 20230619_1883_Aki_TMTPro18x_K_F4 55.186 33.885 53167 46464 55268 53120 56891 58928 52476 49648 69464 49823 64506 54220 60166 69909 68392 58237 58147 77427 49199 42588 55966 53190 58840 58961 53703 51388 69525 50563 66176 55432 62048 70928 68787 59825 55867 73267 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128180000 23578 3544 22124 44281 35646 35646 1 9606 Homo sapiens 0.03857373037294565 RSVQEGENPDDGVR Unmodified 1556.7179 0.7179115 1470 A0A384NL74;P42696;A2A2V2;P42696-2;Q5TCT4;H7C5M1 RBM34 RNA-binding protein 34 yes no 0 0 1 1 0 1 29.477 29.477 3 2.7353E-12 5782 20230619_1880_Aki_TMTPro18x_K_F1 157.7 138.87 22498 14627 19131 22195 27694 25771 26280 23756 32423 22975 23362 32122 30889 26016 20588 28915 33872 30155 20751 13464 19857 21826 28029 25746 26748 24400 32308 23559 24774 31962 30815 27185 21892 29057 32255 28642 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53502000 23579 1470 22125 44282 35647 35647 1 9606 Homo sapiens -0.038178740289595225 RSVSDNDIR Unmodified 1060.5261 0.52613497 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;Q96IF9;Q0IIN5;Q9NTC4;A0A7P0TA22 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 1 3.5 0.5 1 1 23.131 23.24 3 0.0009518 3832 20230619_1882_Aki_TMTPro18x_K_F3 93.058 46.167 184060 106680 246750 257660 327590 378700 271300 290290 296160 241510 329820 383130 305310 275670 319980 143650 328960 320120 170370 98968 246740 249000 332330 371350 277700 301330 301440 251080 336170 378340 313110 281020 324600 157000 314600 302210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 436780000 23580 3656 22126 44283;44284 35648 35648 1 9606 Homo sapiens -0.0017070519861590583 RSVVSFDK Unmodified 936.50288 0.50288033 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959 SAFB Scaffold attachment factor B1 yes no 0 0 1 1.5 0.5 1 1 41.303 41.341 3 0.011992 10700 20230619_1880_Aki_TMTPro18x_K_F1 67.207 9.657 412010 323900 348450 401590 415680 387350 393160 382150 402700 476080 497360 507920 480540 384100 458650 544570 590760 491480 380390 297230 360460 398970 425390 392910 398140 393410 413880 476830 505210 510020 489890 408770 474500 541440 563270 467740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 637450000 23581 2020 22127 44285;44286 35649;35650 35649 2 9606 Homo sapiens 0.0320890075471425 RSVYIDAR Unmodified 978.52468 0.52467841 2690 B7Z592;Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes no 0 0 1 7.5 0.5 1 1 32.552 32.597 3 0.0035025 6562 20230619_1888_Aki_TMTPro18x_K_F8 91.584 54.108 187940 132100 186910 182690 195180 194950 180030 198970 200270 233360 251220 243030 273310 213130 207750 222370 269470 233010 173620 121420 190000 180510 201530 196320 183210 203850 205110 234200 256190 245220 275000 221430 215870 223900 256970 221330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143540000 23582 2690 22128 44287;44288 35651 35651 1 9606 Homo sapiens 0.03455705503279205 RSWQESK Unmodified 919.45118 0.45117911 4652 Q9UBG0 MRC2 C-type mannose receptor 2 yes yes 0 0 1 8 0 1 33.86 33.856 3 0.073343 7040 20230619_1888_Aki_TMTPro18x_K_F8 46.426 18.027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23583 4652 22129 44289 35652 35652 1 9606 Homo sapiens -0.011768429391850077 RSYQFWDTQPVPK Unmodified 1650.8154 0.8154407 1670 P30419;A0A7I2V539;Q96HI4;P30419-2;A0A7I2V3X4;A0A7I2V3U5;A0A7I2V4Y5;K7EN82;B7Z8J4 NMT1 Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase yes no 0 0 1 3 0 1 50.723 50.794 3 4.849E-05 14477 20230619_1882_Aki_TMTPro18x_K_F3 113.76 93.918 299470 270420 302590 267900 286430 311990 359450 355310 322190 316250 314600 297360 338520 294490 344840 348040 358330 352640 277110 247530 306710 271680 300520 313270 357100 358850 330080 321060 324210 302820 345100 306720 351300 349150 342680 334910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 558120000 23584 1670 22130 44290 35653 35653 1 9606 Homo sapiens 0.01606559637821192 RTAATLATHELR Unmodified 1338.7368 0.73679645 4224 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 1 1 0 1 33.013 33.013 4 4.7346E-05 7167 20230619_1880_Aki_TMTPro18x_K_F1 119.79 81.487 65920 48217 64904 71744 82501 90605 87750 87652 96822 59007 67653 58936 53992 48585 77377 53999 67873 52386 60907 44349 66335 70734 84437 90078 88414 88970 96817 61227 70180 59530 56674 50730 77610 54172 64925 49830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109840000 23585 4224 22131 44291 35654 35654 1 9606 Homo sapiens 0.08097752123421742 RTAEHEAAQQDLQSK Unmodified 1710.8285 0.82852458 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 1 3.33 0.471 2 1 31.498 31.57 3;4 1.1904E-07 6144 20230619_1883_Aki_TMTPro18x_K_F4 132.44 94.845 29595 16558 22872 29847 19466 24495 26562 26817 43139 42658 46014 64450 61291 56112 29020 66399 83647 80142 27261 15288 23788 28953 20753 25205 26881 27680 43130 42934 47814 64116 60629 58686 33292 67206 79480 75987 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 170990000 23586 380 22132 44292;44293;44294 35655;35656 35656 2 9606 Homo sapiens 0.001543459592767249 RTALVANTSNMPVAAR Oxidation (M) 1686.8835 0.88353704 3566 P38606-2;P38606;A0A994J738;B7Z2V6 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 1 1 4 0.816 1 1 1 34.46 34.526 3 9.452E-05 7338 20230619_1883_Aki_TMTPro18x_K_F4 111.7 86.377 53121 36263 48971 61738 72363 58259 60920 59423 64251 66958 74114 79446 77021 62847 76221 78955 79117 77054 49037 33422 50492 60157 72839 59229 62193 60854 65701 67626 75756 79518 78455 66225 77694 78975 75656 73214 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 186110000 23587 3566 22133 44295;44296;44297 35657;35658 35657 2236 2 9606 Homo sapiens 0.0675706122617612 RTALVANTSNMPVAAR Unmodified 1670.8886 0.88862242 3566 P38606-2;P38606;A0A994J738;B7Z2V6 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 1 5.5 0.5 1 1 39.816 39.905 3 6.0179E-34 9467 20230619_1885_Aki_TMTPro18x_K_F5 257.46 224.31 207500 144560 210060 228150 229090 235140 228960 254970 274520 271350 316820 333860 309880 282710 293580 320120 373150 349960 191710 133090 213540 223550 236360 237630 232410 259500 278750 275210 322880 334360 315910 295200 303340 322700 356100 332160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 209370000 23588 3566 22133 44298;44299 35659;35660;35661 35660 3 9606 Homo sapiens 0.08001365088807688 RTAQEVETYR Unmodified 1251.6208 0.62076364 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;J3QRQ7;J3KTQ4;C1IK54;J3QR02 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 yes no 0 0 1 3.5 0.5 1 1 31.333 31.407 3 8.4232E-10 6141 20230619_1882_Aki_TMTPro18x_K_F3 173.04 128.73 106060 74614 96007 106870 123900 130340 119810 123750 148150 131300 140730 125040 150010 121630 109340 150170 152030 133810 97906 68609 98845 105540 126390 129850 121900 127040 149010 132160 144970 127220 150880 127100 114480 149420 144930 127340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 491180000 23589 3137 22134 44300;44301 35662;35663 35662 2 9606 Homo sapiens 0.005018085527126459 RTAQEVETYRR Unmodified 1407.7219 0.72187466 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;J3QRQ7;J3KTQ4;C1IK54;J3QR02 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 yes no 0 0 2 6 0.816 1 1 1 26.606 26.674 4 4.5936E-06 3724 20230619_1887_Aki_TMTPro18x_K_F7 142.97 93.192 384740 320200 384760 424950 600960 542390 484740 579050 557930 393310 494250 453120 440020 379990 451490 430140 575380 407710 355800 293980 394200 422050 603100 540550 497880 583660 561210 409380 507510 455200 451580 396900 465550 430350 548160 388100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 456120000 23590 3137 22135 44302;44303;44304 35664;35665 35665 2 9606 Homo sapiens 0.03432260255431174 RTASAPNLAETEK Unmodified 1386.7103 0.71030693 4194 Q86W92-4;Q86W92;F5GZP6;B4DFU8;A0A024RB02;Q86W92-3 PPFIBP1 Liprin-beta-1 yes no 0 0 1 6 0 1 37.286 37.354 3 0.0021849 8478 20230619_1886_Aki_TMTPro18x_K_F6 78.191 64.161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23591 4194 22136 44305 35666 35666 1 9606 Homo sapiens 0.03242018441392247 RTASDQPWSGL Unmodified 1216.5836 0.58364985 3778;3779 Q01082-2;Q8WYB3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 1 6 0 1 48.19 48.268 2 0.060174 13188 20230619_1886_Aki_TMTPro18x_K_F6 37.191 24.615 30545 22943 28564 29081 29009 37253 31650 27978 44447 22521 24156 24069 29240 21219 28385 28239 27382 26269 28214 21062 29198 28964 30238 36820 32131 29092 43677 23159 25964 24287 29625 22367 28822 28156 26200 24976 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9773300 23592 3778;3779 22137 44306 35667 35667 1 9606 Homo sapiens -0.01597862993048693 RTCWPTDLEEAK Unmodified 1504.698 0.69802768 2082 A8K5Y7;Q9HAV4;B3KPQ5;B3KNC6;Q9H8N6 XPO5 Exportin-5 yes no 0 0 1 5.5 0.5 1 1 47.84 47.918 3 1.8431E-05 12872 20230619_1885_Aki_TMTPro18x_K_F5 128.76 109.93 97681 64830 78199 88060 74126 97203 72335 96335 124810 132610 111200 149410 154680 141200 72082 198090 212050 220720 90068 59592 81054 87123 77561 97525 74729 99370 123790 132600 116750 150610 152810 148930 83169 198980 201590 209370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110600000 23593 2082 22138 44307;44308 35668 35668 1 9606 Homo sapiens -0.03413341293253325 RTDALTSSPGR Unmodified 1159.5945 0.59454889 2702 B7Z8Z6;P49736;F8WDM3;C9J013;C9JZ21 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 1 7 0.816 1 1 1 29.485 29.538 3 0.00023542 5673 20230619_1886_Aki_TMTPro18x_K_F6 110.98 85.739 62676 40704 69826 69168 85677 90075 84185 86091 108940 70879 88206 84311 78196 66299 90991 58862 93033 75088 57935 37523 70573 67751 87679 89363 85715 87801 108600 72923 91035 84357 80740 68607 92223 60296 88869 71213 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 64227000 23594 2702 22139 44309;44310;44311 35669;35670;35671 35669 3 9606 Homo sapiens 0.02113539381252849 RTDDIPVWDQEFLK Unmodified 1760.8733 0.87334951 2881 E5RJR5;E5RI56;P63208;E7ERH2;F8W8N3;P63208-2;E5RGM3 SKP1 S-phase kinase-associated protein 1 yes no 0 0 1 5.25 1.48 1 1 1 1 59.563 59.61 3;4 7.9286E-07 17950 20230619_1886_Aki_TMTPro18x_K_F6 134.04 106.71 91007 75425 90061 92834 69469 99422 97905 90942 97189 112300 107490 102630 114680 96989 98784 125800 115800 135160 84151 69195 91308 92414 74706 99790 97070 94084 99531 112040 110080 104470 116060 101800 101830 126390 110760 128210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 111280000 23595 2881 22140 44312;44313;44314;44315 35672;35673;35674 35674 3 9606 Homo sapiens 0.023347767726136226 RTDEAAFQK Unmodified 1064.5251 0.52507234 3508 P26447;Q5Q9Z3 S100A4 Protein S100-A4 yes no 0 0 1 4.5 0.5 1 1 36.834 36.902 3 4.6985E-05 8257 20230619_1885_Aki_TMTPro18x_K_F5 148.56 114.37 67600 40459 63820 55814 50729 56784 80634 86640 121320 151930 237830 267480 222590 259060 159750 190060 418440 409100 62374 37215 64918 55170 54612 58024 80906 88192 125820 153530 237930 265850 225410 263830 177950 204220 397790 386280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143330000 23596 3508 22141 44316;44317 35675 35675 1 9606 Homo sapiens -0.004609195675357114 RTDIFGVEETAIGK Unmodified 1534.7991 0.79912193 146 A0A024R1K8;Q15459;Q15459-2;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 1 6.5 0.5 1 1 54.443 54.514 3 3.5525E-05 15772 20230619_1886_Aki_TMTPro18x_K_F6 108.34 76.275 122470 100940 104360 119410 118160 133240 131150 119540 141940 140840 141280 134400 151990 135020 153590 158870 139760 160440 113110 92566 107830 119250 122050 133380 131780 123670 144000 141040 145450 136810 154870 140510 155430 159350 134000 152290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 693490000 23597 146 22142 44318;44319 35676 35676 1 9606 Homo sapiens 0.05311433681072231 RTDVGAGALR Unmodified 1014.557 0.55704117 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B7Z3E7 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 1 7 0.816 1 1 1 31.387 31.434 3 1.1866E-05 5857 20230619_1887_Aki_TMTPro18x_K_F7 128.51 54.213 68090 57651 59277 68065 93034 93461 93532 87583 125360 49582 63279 52496 55502 42561 77233 52275 66711 47656 62907 52864 61517 68211 93973 92459 95145 88864 123150 52387 67474 52908 57918 44755 77425 52204 63798 45383 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61019000 23598 1984 22143 44320;44321;44322 35677;35678 35677 2 9606 Homo sapiens 0.05034492906293053 RTDWTGK Unmodified 862.42972 0.42971539 1847 A0A8V8TPV5;A0A8V8TQZ3;Q8WWQ0;A0A8V8TPK0;A0A8V8TP75;A0A8V8TPB8 PHIP PH-interacting protein yes no 0 0 1 1 0 1 36.891 36.891 3 0.061557 8742 20230619_1880_Aki_TMTPro18x_K_F1 55.37 26.22 60680 44507 61987 59697 65808 81586 68264 76903 92894 68167 87015 93435 88974 69871 69170 58368 106800 92599 56082 40887 62915 59326 68228 80685 69470 78618 92900 70162 89647 92846 89801 72307 72686 60797 101720 87640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22074000 23599 1847 22144 44323 35679 35679 1 9606 Homo sapiens -0.007002279678999912 RTDYQLYASGSSSR Unmodified 1589.7434 0.74339797 3308 O75529;O75529-2 TAF5L TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L yes no 0 0 1 8 0 1 36.407 36.394 3 8.6302E-07 8031 20230619_1888_Aki_TMTPro18x_K_F8 112.12 98.708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23600 3308 22145 44324 35680 35680 1 9606 Homo sapiens -0.02788399506539463 RTEALEQGGLPK Unmodified 1297.699 0.69901396 1068 D6R9G1;D6RAD4;A0A0S2Z3F9;P50613 CDK7 Cyclin-dependent kinase 7 yes no 0 0 1 6 0 1 40.63 40.723 3 9.8885E-06 9837 20230619_1886_Aki_TMTPro18x_K_F6 136.93 95.769 62655 37760 51140 60627 60447 66209 65962 64094 83281 68700 73504 89825 80922 75972 58687 103980 112930 103350 57752 34795 53108 59378 62248 66448 66699 65767 83435 69858 76279 89770 81425 80252 63307 103860 107460 98207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61220000 23601 1068 22146 44325 35681 35681 1 9606 Homo sapiens 0.062072411379404 RTEEENLR Unmodified 1045.5152 0.51523593 1148 P04637-2;J3KP33;A0A386NC55;A0A386NFX3;A0A386NCX4;B4DNI2;A0A386NC62;H2EHT1;Q1MSW8;A0A386NCB1;A0A386NC25;P04637;A0A386NCW8;P04637-5;P04637-6;P04637-3;A0A0U1RQC9;A0A386NC22;P04637-4;A0A386NDB3;Q2XSC7;K7PPA8;H6U5S3;H6U5S2;E5RMA8;K7PPU4;B6E4X6;A0A386NDA8;A0A386NCU2;A0A386NC20;P04637-8;A0A223PQI5;Q1MSX0;Q5U0E4;A0A386NCA6;P04637-7;B4DMH2;E7ESS1;A0A386NG45;P04637-9;A0A087X1Q1;A0A087WT22;A0A087WXZ1;L0EQ03;L0EQ52;A4GW97;A0A218MJD5;L0EPV7;A4GW74;A0A0M4B4Y9;A0A218MJF3;A0A218MJE5;A0A218MJB0;A0A218MJC8;L0EQ05;A0A218MJD9;Q53GA5;A0A346XM43;A4GW76;A4GW75;L0ENG9;A0A346XM39;A0A1B1PFD4;D5KL87;B4XAL0;A2I9Z1;U6BHU6;U6BI14;U6BKV7;A0A346XM28;L0EPZ1;L0ENF7;A0A346XM34;L0EPW3;A4GW67;L0EQP9;L0EQQ9;L0EQU5;L0EQP1;L0ERB4;L0EQX3;L0ENG6;A4GWB4 TP53 Cellular tumor antigen p53 yes no 0 0 1 1 0 1 26.137 26.137 3 0.05625 4507 20230619_1880_Aki_TMTPro18x_K_F1 48.091 28.776 2733.8 1303.5 2900.7 3183.6 4103.2 4395.3 2727.8 3541.9 2982 3938.3 3242.8 4026.6 2828.8 3708.4 3133.6 1396.1 3243.5 2868.7 2522.6 1210.9 2951.5 3071.6 4129 4329.5 2841.7 3684.7 3041.9 3960 3303 4061.9 2923.1 3710 3177 1530 3099.7 2710.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3267300 23602 1148 22147 44326 35682 35682 1 9606 Homo sapiens -0.00570107572912093 RTEEGPTLSYGR Unmodified 1364.6684 0.66844211 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 1 5 0.816 1 1 1 34.857 34.921 3 1.3554E-10 7489 20230619_1883_Aki_TMTPro18x_K_F4 191.95 166.71 199510 168130 190160 197100 241220 233690 247870 222230 235430 246650 255440 217340 261760 188930 242450 225830 231950 190580 184440 154160 194740 197190 246360 233390 249090 228490 241470 247040 261190 221100 265750 197900 246190 224470 221740 181540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1016199999.9999999 23603 1059 22148 44327;44328;44329 35683;35684;35685 35683 3 9606 Homo sapiens 0.000694627529128411 RTEFAGDK Unmodified 922.45084 0.45084476 3189 M0QXU7;Q9UPE4;Q53G69;O43615 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 yes no 0 0 1 4.5 0.5 1 1 34.459 34.528 3 0.0084402 7376 20230619_1885_Aki_TMTPro18x_K_F5 83.862 29.705 120460 57189 141370 158700 193620 205570 178020 204860 189640 116720 207200 235960 187080 161390 181270 99170 233110 228130 111260 53271 142770 152320 196420 204060 180830 206940 192860 126340 211080 231450 191340 165750 186810 108150 222500 215330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132200000 23604 3189 22149 44330;44331 35686 35686 1 9606 Homo sapiens -0.013482626590530344 RTEGVGPGVPGEVEMVK Oxidation (M) 1755.8825 0.88253399 3185 Q8NHX0;L7RXH5;P27361-2;P27361;E9PJF0;E9PQW4;P27361-3 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 0 1 1 5 0 1 44.072 44.151 3 0.027155 11268 20230619_1885_Aki_TMTPro18x_K_F5 52.149 38.949 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23605 3185 22150 44332 35687 35687 1849 1 9606 Homo sapiens 0.0348280206662821 RTEGVGPGVPGEVEMVK Unmodified 1739.8876 0.88761936 3185 Q8NHX0;L7RXH5;P27361-2;P27361;E9PJF0;E9PQW4;P27361-3 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 0 0 1 5 0 1 47.602 47.679 3 7.7352E-08 12757 20230619_1885_Aki_TMTPro18x_K_F5 130.47 111.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23606 3185 22150 44333 35688 35688 1 9606 Homo sapiens 0.04727105929237041 RTEITIVK Unmodified 958.58113 0.58113065 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q1WWK5;B4DTL7;K7ENL0;K7EJ51;K7ER34 SEPT9 Septin-9 yes no 0 0 1 1.5 0.5 1 1 41.526 41.564 3 0.011196 10776 20230619_1880_Aki_TMTPro18x_K_F1 76.345 35.156 97844 75340 89284 94975 93352 116480 101480 114960 161900 127240 153760 211140 212830 203300 112210 278600 309140 354760 90375 69154 91523 94585 97108 116070 103730 117860 161090 130600 160960 210380 210980 213920 127670 282410 294200 335980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74931000 23607 541 22151 44334;44335 35689 35689 1 9606 Homo sapiens 0.10018333339962737 RTELSIDISSK Unmodified 1247.6721 0.67213051 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q1WWK5;B4DTL7;K7ENL0;K7EPY1;K7EJV0 SEPT9 Septin-9 yes no 0 0 1 7 0 1 46.438 46.526 2 2.0532E-09 11988 20230619_1887_Aki_TMTPro18x_K_F7 199.8 143.89 59765 52292 53983 56587 41586 42777 60240 53083 59332 72842 72302 80019 83616 66359 69080 81425 72121 83300 55243 47905 55148 56654 44648 44582 59639 54090 61071 72734 74115 80412 84245 69719 70741 81653 69053 79058 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288530000 23608 541 22152 44336 35690 35690 1 9606 Homo sapiens 0.058201325267418724 RTELTAATGER Unmodified 1203.6208 0.62076364 4644 Q9P265;Q96IB4 DIP2B Disco-interacting protein 2 homolog B yes no 0 0 1 4 0.816 1 1 1 31.283 31.359 3 2.8032E-06 6051 20230619_1883_Aki_TMTPro18x_K_F4 150.69 119.1 87394 64925 87134 90348 117200 105910 99110 117640 121480 97474 120300 123130 113850 104950 110260 110600 146550 119180 80762 59666 88972 89358 118720 106210 101720 118770 122370 100380 123220 123240 116330 109110 114180 111550 139680 113210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98582000 23609 4644 22153 44337;44338;44339 35691;35692 35691 2 9606 Homo sapiens 0.02709808552708637 RTEPVALEHER Unmodified 1335.6895 0.6895119 3109 I3L380;Q8N2K0;Q8N2K0-2 ABHD12 Monoacylglycerol lipase ABHD12 yes no 0 0 1 2.5 0.5 2 2 28.549 28.64 3;4 0.00026108 5247 20230619_1881_Aki_TMTPro18x_K_F2 100.55 83.226 28064 20878 23305 27803 26461 31505 27893 31724 41889 28882 34141 40570 45318 36356 29970 46461 54240 55746 25899 19177 24148 27550 27331 31569 28472 32312 41534 29724 35904 40528 45187 38194 32173 46987 51672 52844 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112660000 23610 3109 22154 44340;44341;44342;44343 35693;35694 35693 2 9606 Homo sapiens 0.03509472852397266 RTFGMAEEYHR Oxidation (M) 1411.6303 0.63028247 4222 Q8N1F7;A8K897;H3BVG0;H3BV11;H3BRI8;H3BM93;H3BNN5 NUP93 Nuclear pore complex protein Nup93 yes no 0 1 1 5.5 0.5 1 1 30.349 30.403 4 0.0045716 5779 20230619_1885_Aki_TMTPro18x_K_F5 78.548 62.792 29610 20783 22451 30941 25931 30818 28097 32735 43644 32715 36108 38217 35959 33346 25582 45062 46923 41350 27300 19119 23508 30390 26784 31198 28682 33303 43241 33252 37387 38403 36262 35153 27479 44826 44651 39334 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 43125000 23611 4222 22155 44344;44345 35695;35696 35695 2705 2 9606 Homo sapiens -0.05906746433447552 RTFGMAEEYHR Unmodified 1395.6354 0.63536784 4222 Q8N1F7;A8K897;H3BVG0;H3BV11;H3BRI8;H3BM93;H3BNN5 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 1 6.5 0.5 1 1 34.581 34.642 4 9.2587E-05 7489 20230619_1886_Aki_TMTPro18x_K_F6 106.67 83.292 32126 19107 27213 28670 26401 30205 29126 38601 44471 37305 40015 46219 44691 41412 32730 50059 55593 52828 29618 17593 28049 28190 27611 30601 29705 38788 44238 38046 41491 46356 44949 43316 34847 50267 52951 50157 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40872000 23612 4222 22155 44346;44347 35697 35697 1 9606 Homo sapiens -0.04662442570815983 RTFGPPPSLSPGAFSYSSSSR Unmodified 2184.06 0.05998108 2433 B3KWQ6;P41219;P41219-2 PRPH Peripherin yes no 0 0 1 7 0 1 51.296 51.374 3 4.8921E-38 14168 20230619_1887_Aki_TMTPro18x_K_F7 241.79 233.89 47144 44527 46849 45977 42988 41506 45002 47350 40869 53374 59128 62331 60121 52091 63615 71786 63970 65350 43633 40765 47539 46296 44947 42489 45179 48137 42647 53847 59894 62549 61493 55088 64694 71438 61212 62133 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100690000 23613 2433 22156 44348 35698 35698 1 9606 Homo sapiens 0.015313488703668554 RTFPVLLR Unmodified 1000.6182 0.61818486 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 7.5 0.5 1 1 45.452 45.509 3 0.00084994 11684 20230619_1888_Aki_TMTPro18x_K_F8 124.23 82.121 162410 135040 128580 142580 135440 168040 143180 159160 249690 61791 61114 47385 62007 55285 87389 77551 70945 55213 149930 123710 133630 143750 140800 167760 147080 160570 240180 67633 71550 49220 64574 57912 87450 76363 67930 52736 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 149860000 23614 3758 22157 44349;44350 35699;35700 35700 2 9606 Homo sapiens 0.11790049676369563 RTGAIVDVPVGEELLGR Unmodified 1779.9843 0.98429694 3504 V9HW26;P25705;P25705-2;K7EK77;B4DGW3;K7ERX7;K7EJP1;K7EQH4 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 1 6.5 0.5 1 1 54.669 54.74 3 1.998E-38 15938 20230619_1886_Aki_TMTPro18x_K_F6 257.37 217.94 817980 694630 785810 888160 762290 895840 959130 975010 1005500 1061200 1062300 1042900 1124600 977030 1030500 1181700 1067000 1203000 756300 637450 801370 881140 799290 906910 957230 992840 1024400 1067100 1089900 1057600 1141400 1020900 1052500 1185000 1021500 1141900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2845600000 23615 3504 22158 44351;44352 35701;35702 35701 2 9606 Homo sapiens 0.12550416480712556 RTGCTFPEKPDFH Unmodified 1590.7249 0.72491113 1168 Q86U79;A0A140VJE0;P55263-2;P55263;P55263-3;P55263-4;A0A5F9ZHJ1 ADK Adenosine kinase yes no 0 0 2 8 0 1 42.224 42.227 3 0.066699 10357 20230619_1888_Aki_TMTPro18x_K_F8 58.674 47.031 17439 15565 20466 19364 15902 21220 17925 22946 23317 21888 22786 19516 20386 16078 19656 21318 20645 23283 16157 14277 20465 19276 16963 21345 18147 23276 23421 22101 23274 19817 20839 16989 20066 21442 19761 22084 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11022000 23616 1168 22159 44353 35703 35703 1 9606 Homo sapiens -0.046822326821256866 RTGIPTLGK Unmodified 941.56581 0.56581494 1651 A0A7I2V2U6;B2R7W0;P13995;P13995-2;B8ZZU9;A0A7I2YQD4;B4DY35 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes no 0 0 1 5 0 1 42.044 42.129 3 0.00027439 10403 20230619_1885_Aki_TMTPro18x_K_F5 121.6 66.54 244930 176400 178970 228810 193780 246310 205440 217160 329550 263920 295060 366690 324640 286250 279340 416800 445930 479910 225800 162010 187840 226880 201110 246980 210270 225170 327110 267500 306050 364880 328570 304810 294810 419760 425280 455030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77234000 23617 1651 22160 44354 35704;35705 35705 2 9606 Homo sapiens 0.0926946654275298 RTGIQEMR Unmodified 989.50765 0.50764813 3850 Q13435;E9PPJ0;Q7Z3K9 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 1 7 0.816 1 1 1 29.065 29.119 3 0.0033795 4938 20230619_1887_Aki_TMTPro18x_K_F7 90.906 50.861 160720 119660 142330 160060 186340 197540 189030 193980 238920 119670 137130 129760 121580 106720 137520 127930 164970 93515 148390 109920 146890 158780 190200 196790 191870 196400 236100 125440 144790 130600 125460 111870 140990 126370 157080 89448 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 186650000 23618 3850 22161 44355;44356;44357 35706;35707;35708 35707 3 9606 Homo sapiens 0.01247461625825963 RTGQPMIHIYLDK Oxidation (M) 1586.8239 0.8238969 1025 H7BY36;A0A0D9SFL3;B0QYK0;C9JGE3;Q01844-2;Q01844-6;Q01844-3;Q01844;Q01844-5 EWSR1 RNA-binding protein EWS yes no 0 1 1 2.5 0.5 1 1 44.014 44.09 4 0.0027604 11368 20230619_1882_Aki_TMTPro18x_K_F3 80.534 56.242 202180 159620 197590 211820 234370 260060 227590 233950 250750 230930 269440 254560 259760 227690 218760 246740 293910 284570 186870 146580 201740 210200 240370 258670 230640 240700 254820 234320 275000 256530 263580 236790 227470 249680 280420 269920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 381340000 23619 1025 22162 44358;44359 35709;35710 35710 594 2 9606 Homo sapiens 0.0539579028281878 RTGSNISGASSDISLDEQYK Unmodified 2127.008 0.008005089 3486 P22059;B4DR25 OSBP Oxysterol-binding protein 1;Oxysterol-binding protein yes no 0 0 1 5 0 1 45.459 45.537 3 4.6E-16 11829 20230619_1885_Aki_TMTPro18x_K_F5 154.75 139.98 24830 20256 25756 25256 19006 21181 20841 18621 23764 28062 29463 31810 31655 23834 33530 35180 31809 31567 22966 18586 25977 25045 20328 21676 21017 19475 24292 27960 30083 31851 32301 25453 33977 34963 30450 30021 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79910000 23620 3486 22163 44360 35711 35711 1 9606 Homo sapiens -0.010418593340546067 RTGVAGSQPVSEK Unmodified 1314.6892 0.68917755 3191 M0QYT5;Q9NZ43 USE1 Vesicle transport protein USE1 yes no 0 0 1 7.5 0.5 1 1 32.867 32.911 3 9.7844E-05 6493 20230619_1887_Aki_TMTPro18x_K_F7 104.7 53.818 22610 10337 26312 26698 36487 42797 34834 37769 37030 23071 44422 47635 33983 33632 39553 17996 41871 41577 20878 9616 26585 25793 37056 41888 35294 38529 37804 24864 44805 46740 35304 34321 40127 19732 40037 39241 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31164000 23621 3191 22164 44361;44362 35712;35713 35712 2 9606 Homo sapiens 0.04442053132561341 RTGVQTFR Unmodified 963.52501 0.52501276 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITV3;A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 1 3.5 1.12 1 1 1 1 29.317 29.396 3 0.0017589 5356 20230619_1882_Aki_TMTPro18x_K_F3 113.71 68.026 169150 123130 139660 143760 209780 228820 174570 183390 272890 81542 89096 70956 71290 65738 99132 88215 96325 61732 156080 112960 145400 144590 211670 223860 180920 187680 264500 87979 99187 72527 74789 69112 100090 86856 91950 59040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 240660000 23622 3647 22165 44363;44364;44365;44366 35714;35715;35716 35714 3 9606 Homo sapiens 0.041791252231291764 RTGYESGEYEMLGEGLGVK Oxidation (M) 2089.9626 0.9626348 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4H4;A0A7I2V4Y9;B3KTX4;F8W1I6;A0A7I2V390;F8VW18;F8VRV7;H0YHL1 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 1 1 5.5 0.5 1 1 50.74 50.816 3 5.9942E-09 14050 20230619_1885_Aki_TMTPro18x_K_F5 125.23 115.31 41152 35017 42393 52886 49411 53611 50570 49772 45351 64737 75990 71630 65307 63581 59856 75280 67224 79028 38071 32195 43131 51911 50763 54056 50789 51527 47772 64793 76023 72158 66774 66435 61462 75626 64330 74978 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116680000 23623 1406 22166 44367;44368 35717 35717 878 1 9606 Homo sapiens -0.03874801120809934 RTGYESGEYEMLGEGLGVK Unmodified 2073.9677 0.96772018 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4H4;A0A7I2V4Y9;B3KTX4;F8W1I6;A0A7I2V390;F8VW18;F8VRV7;H0YHL1 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 0 1 5 0 1 54.476 54.543 3 7.1112E-15 15642 20230619_1885_Aki_TMTPro18x_K_F5 162.82 159.11 84093 68489 85627 95157 63552 87044 90735 93872 95311 123610 137800 138130 143640 112350 108950 145280 136820 141660 77768 62918 86606 93785 68604 88734 90125 96237 98605 123690 139590 138720 144690 118510 113140 145150 130670 134570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212100000 23624 1406 22166 44369 35718 35718 1 9606 Homo sapiens -0.026304972582238406 RTHLASDDLYK Unmodified 1317.6677 0.66771383 2112 A8K800;Q9H7B2;Q5VXN0;B4DWS5 RPF2 Ribosome production factor 2 homolog yes no 0 0 1 6 0 1 36.979 37.047 4 0.022188 8365 20230619_1886_Aki_TMTPro18x_K_F6 63.537 34.793 38954 26830 36337 43237 46700 46033 45746 48970 46824 43439 49514 45771 45678 43167 39991 49922 50329 46267 35964 24709 37323 42327 47616 46393 46223 49668 47739 44266 50478 46307 46508 44943 41391 49830 48026 43998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38243000 23625 2112 22167 44370 35719 35719 1 9606 Homo sapiens 0.02158668103834316 RTHNDIIHNENMR Oxidation (M) 1664.7801 0.7801346 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;B7Z9R6 EZR;HEL-S-105 Ezrin yes no 0 1 1 5 0.816 2 2 2 23.744 23.801 3;4 0.00014527 3790 20230619_1885_Aki_TMTPro18x_K_F5 107.35 93.318 49358 14018 42690 55061 62918 48544 62013 56774 68541 62003 69343 65988 69875 55622 42884 81341 71755 75375 45395 13202 44281 52053 63455 49743 62748 57504 69476 62504 71066 66445 69977 59019 45817 80868 68400 71642 3 2 4 4 3 4 4 3 4 4 4 3 3 3 3 4 4 4 211640000 23626 3456 22168 44371;44372;44373;44374;44375;44376 35720;35721;35722 35721 2107 3 9606 Homo sapiens -0.025664261615929718 RTHNDIIHNENMR Unmodified 1648.7852 0.78521998 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;B7Z9R6 EZR;HEL-S-105 Ezrin yes no 0 0 1 5.5 0.5 2 2 25.616 25.669 3;4 2.5716E-21 3849 20230619_1885_Aki_TMTPro18x_K_F5 195.1 171.69 48037 21354 44540 65006 66723 56988 63047 60805 80168 82718 79390 65903 86605 77892 49236 94045 91461 78010 44265 19924 45827 61838 67350 58287 64281 62451 80724 81937 81652 68144 86457 80783 53161 93220 87008 74313 3 2 2 3 3 3 3 3 3 3 3 3 3 3 2 3 3 3 125220000 23627 3456 22168 44377;44378;44379;44380 35723;35724;35725 35723 3 9606 Homo sapiens -0.013221222989614034 RTHSQGGYGSQGYK Unmodified 1524.707 0.70695288 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2;K7EPH2;K7ERS0 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 1 3.4 1.85 1 1 1 1 1 27.503 27.569 4 6.4974E-09 5166 20230619_1881_Aki_TMTPro18x_K_F2 133.48 111.11 49531 20056 41835 52378 55493 54662 48045 57750 57908 58682 68441 82323 77383 65557 50113 59034 95133 81243 45597 18678 43393 50196 56343 55123 49214 58796 58878 59953 70170 81858 77437 67850 53958 60652 90491 76980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 87561000 23628 4109 22169 44381;44382;44383;44384;44385 35726;35727;35728 35726 3 9606 Homo sapiens -0.03441231612578122 RTIAPCQK Unmodified 972.51748 0.51748454 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 1 3 0.816 1 1 1 32.7 32.763 3 0.00040779 6666 20230619_1882_Aki_TMTPro18x_K_F3 145.72 75.912 171900 93518 269140 235650 321200 367410 260160 341080 288650 176400 277090 307610 247900 231490 318280 125850 315920 259510 159360 86861 265890 227810 327730 360500 267050 345570 291540 191170 283940 303550 257400 235720 321160 136330 301900 245280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148230000 23629 1488 22170 44386;44387;44388 35729 35729 1 9606 Homo sapiens 0.03012649631205022 RTIAQDYGVLK Unmodified 1262.6983 0.69828568 1476 A0A384NPQ2;Q06830;A0A0A0MSI0;B2R4P2 PRDX1 Peroxiredoxin-1 yes no 0 0 1 2 0.707 1 2 1 46.359 46.418 3;4 5.7671E-05 12732 20230619_1881_Aki_TMTPro18x_K_F2 131.32 75.228 2090600 1700500 1617000 1751300 2193600 2804900 1703900 1994500 2636900 877830 846880 672120 813880 656070 1270300 879870 912580 707320 1929400 1557600 1691500 1778200 2226200 2737000 1774700 2062400 2557200 944990 951300 692960 853800 689240 1261700 872270 875190 674400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 7058799999.999999 23630 1476 22171 44389;44390;44391;44392 35730;35731;35732 35731 3 9606 Homo sapiens 0.07744446488891299 RTIGSGEPGVPTK Unmodified 1297.699 0.69901396 876 A0A087X0H9;Q5T8P6-5;Q5T8P6-4;Q5T8P6-3;Q5T8P6-2;Q5T8P6 RBM26 RNA-binding protein 26 yes no 0 0 1 8 0 1 38.73 38.717 3 0.0030054 8969 20230619_1888_Aki_TMTPro18x_K_F8 72.209 27.073 48383 37258 43705 49911 52580 60637 52965 51094 71261 50287 59564 62428 59412 50619 41031 66175 72918 70873 44686 34221 44961 49482 53987 60267 53927 52849 71018 51286 61641 62448 59811 53425 43944 66430 69445 67273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54274000 23631 876 22172 44393 35733 35733 1 9606 Homo sapiens 0.062072411379404 RTIQFVDWCPTGFK Unmodified 1753.861 0.86101068 4144 Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;P0DPH7-2;C9J2C0;Q9NY65-2;Q9NY65;Q6PEY2;Q7Z3M3;A0A7P0T945;Q8N532;A0A7P0TA31;V9GZ17 TUBA1A;TUBA1C;TUBA2;TUBA8;TUBA3E;DKFZp686L04275 Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain yes no 0 0 1 4.67 0.745 3 2 1 59.164 59.199 3;4 1.34E-11 17538 20230619_1885_Aki_TMTPro18x_K_F5 149 131.72 1833800 1348500 1509800 1758500 1258900 1486400 1521200 1748700 1908600 2255900 2091100 2156500 2326800 2110400 1368400 2663400 2710900 2652800 1692100 1238400 1558300 1738600 1336800 1529500 1531800 1781500 1931700 2248900 2146100 2192500 2324000 2207300 1489500 2662900 2580400 2519900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 11682000000 23632 4144 22173 44394;44395;44396;44397;44398;44399 35734;35735;35736;35737 35736 4 9606 Homo sapiens 0.014234618285399847 RTLEGELHDLR Unmodified 1337.7052 0.70516197 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80;A0A6Q8PGH0 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 1 3.5 0.5 2 2 40.153 40.203 3;4 2.3569E-09 9602 20230619_1883_Aki_TMTPro18x_K_F4 169.6 110.35 330840 260520 283000 371510 453260 582930 476600 518080 729480 507560 548540 684850 642040 573520 524930 731360 691630 862140 305480 239430 294780 368510 459190 571480 486600 533170 720980 519430 576160 683370 647220 603580 546240 738990 661320 816850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1016999999.9999999 23633 1428 22174 44400;44401;44402;44403 35738;35739 35739 2 9606 Homo sapiens 0.04981759369456995 RTLGSSDTQQLR Unmodified 1360.7059 0.70589025 2060 A8K4Z6;Q9BRD0;H7C462 BUD13 BUD13 homolog yes no 0 0 1 7.5 0.5 1 1 31.47 31.522 3 0.00078223 5933 20230619_1887_Aki_TMTPro18x_K_F7 88.552 64.298 10397 7321.2 10081 10475 12979 13598 14062 14505 18360 8204.2 9796.7 12633 13748 9284.7 12715 11234 13962 12656 9603.3 6731.8 10315 10359 13282 13530 14238 14585 18087 8779.3 10649 12510 13846 9800.3 13006 11343 13337 12010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12975000 23634 2060 22175 44404;44405 35740 35740 1 9606 Homo sapiens 0.0399655401849941 RTLPQLPNEEK Unmodified 1323.7147 0.71466402 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B4DL23 CEP170 Centrosomal protein of 170 kDa yes no 0 0 1 7 0 1 43.275 43.354 3 0.00017644 10541 20230619_1887_Aki_TMTPro18x_K_F7 115.34 75.633 46028 45993 50221 55548 53674 59021 57466 51000 61936 63067 69540 66532 69320 56577 64385 71038 82958 76967 42652 42160 50754 55351 55562 59246 57859 53009 63154 63203 70962 67066 70522 59476 66616 71463 79153 73063 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131030000 23635 1960 22176 44406 35741 35741 1 9606 Homo sapiens 0.06575527654990765 RTLTGTAALTVQSQEDNLR Unmodified 2073.0814 0.081444804 1222 A0A140VK27;P09960;P09960-2;Q59ES1;B4DEH5 LTA4H Leukotriene A-4 hydrolase yes no 0 0 1 7 0 1 45.428 45.514 3 2.5136E-06 11521 20230619_1887_Aki_TMTPro18x_K_F7 94.313 80.634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23636 1222 22177 44407 35742 35742 1 9606 Homo sapiens 0.08782733899033701 RTLVGLVR Unmodified 912.58688 0.58688473 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8;E5RIW1 XPO7 Exportin-7 yes no 0 0 1 7 0 1 40.14 40.205 3 0.018882 9326 20230619_1887_Aki_TMTPro18x_K_F7 69.954 40.144 123240 101840 101040 103050 117670 144240 121370 138770 166360 87431 83523 79069 84007 70621 101520 96637 102510 81972 113790 93262 104770 104580 121260 142580 123510 140670 163400 91003 89625 80455 86605 74492 102940 95895 97926 78088 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36247000 23637 2083 22178 44408 35743 35743 1 9606 Homo sapiens 0.1270947664228288 RTMTNALR Unmodified 961.51273 0.51273351 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O43242-2 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 1 4 0 1 29.948 30.015 3 0.0086591 5576 20230619_1883_Aki_TMTPro18x_K_F4 76.827 35.378 24582 22737 21216 19210 38298 40750 28838 28982 45335 8438.8 12453 11600 9776.1 10018 13455 7902.1 9658.3 8775.3 22723 20786 22075 19987 38205 39315 30096 29855 43820 9812 14204 11597 10261 10264 13377 8045.6 9271.6 8328.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4931600 23638 2361 22179 44409 35744 35744 1 9606 Homo sapiens 0.03043765488439476 RTNFEGPPR Unmodified 1072.5414 0.5413911 4434 Q9BTV5;M0R366 FSD1 Fibronectin type III and SPRY domain-containing protein 1 yes no 0 0 1 7 0.816 1 1 1 30.798 30.847 3 9.1331E-05 5639 20230619_1887_Aki_TMTPro18x_K_F7 127.76 104.34 48955 40177 53045 55866 69085 69789 57652 61962 69914 53396 70845 69132 63547 60770 66210 64629 79371 69187 45300 36908 53790 55292 70138 69334 59192 63604 70502 54937 72319 69217 65275 63128 67992 65154 75744 65703 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44654000 23639 4434 22180 44410;44411;44412 35745;35746 35745 2 9606 Homo sapiens 0.008022063892212827 RTNIIPVLEDAR Unmodified 1395.7834 0.78341229 1973 A6NHQ2 FBLL1 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 yes yes 0 0 1 7.5 0.5 1 1 46.416 46.484 3 1.0522E-05 12061 20230619_1888_Aki_TMTPro18x_K_F8 136.33 0 51110 47477 48856 52532 51367 55881 63655 66112 75633 61076 61845 63841 73309 59289 53979 75917 64640 66677 47283 43494 49887 52711 53494 56500 63826 66682 75787 62096 64597 64563 73530 62185 55940 75443 61758 63421 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 423260000 23640 1973 22181 44413;44414 35747 35747 1 9606 Homo sapiens 0.10135191954668699 RTNVPDIR Unmodified 969.53558 0.53557744 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;Q01433-5;Q01433-3;Q01433-4;H0YF16;A0A804H2H4 AMPD2 AMP deaminase 2 yes no 0 0 1 7.5 0.5 1 1 32.287 32.336 3 0.047573 6474 20230619_1888_Aki_TMTPro18x_K_F8 57.532 26.962 124130 80880 171460 160600 270870 207330 197980 234390 184690 127850 209110 186380 143290 133960 260690 111120 175030 149990 114990 74731 171550 156190 270600 206780 203570 234590 189630 136650 210600 184880 153870 138660 257460 114720 168120 142150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26868000 23641 1570 22182 44415;44416 35748;35749 35749 2 9606 Homo sapiens 0.04959107877562019 RTPALIALR Unmodified 1009.6396 0.63964859 3794;3964 Q04828;H0Y804;B4DK69;P52895;Q2XPP3;S4R3Z2;A0A0A0MSS8;P42330;P42330-2 AKR1C1;AKR1C2;AKR1C3 Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C3 no no 0 0 1 7 0.816 1 1 1 42.06 42.135 3 0.00018578 10108 20230619_1887_Aki_TMTPro18x_K_F7 131.22 98.494 13429 13447 9933 20386 90698 237400 127010 128820 643270 5609.5 0 15702 12149 8746.9 10006 7620 10270 10677 12408 12357 11943 22685 91027 220570 140910 135550 597700 14210 20156 15247 11907 9193.7 10209 7856.9 9826.8 10107 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 87205000 23642 3794;3964 22183 44417;44418;44419 35750;35751;35752 35751 3 9606 Homo sapiens 0.13521434705080537 RTPDFHDK Unmodified 1014.4883 0.4882929 1499 A0A3B3IRN8;A0A3B3ITX0;P24311 COX7B Cytochrome c oxidase subunit 7B, mitochondrial yes no 0 0 1 5.5 0.5 1 1 33.412 33.475 3 0.0074105 6955 20230619_1885_Aki_TMTPro18x_K_F5 89.08 49.37 66610 48507 70820 75513 99250 104040 95805 106240 127820 68348 100750 103240 92378 77990 84114 78753 114590 96128 61582 44642 72054 74383 100740 103050 97761 107320 127070 72253 104280 102400 94195 81320 87318 80129 109220 91186 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61309000 23643 1499 22184 44420;44421 35753;35754 35753 2 9606 Homo sapiens -0.018371713934357103 RTPFGAYGGLLK Unmodified 1278.7085 0.70845643 2292 B2RB23;P42765;A0A0B4J2A4;B3KNP8 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes no 0 0 1 6.5 0.5 1 1 52.81 52.884 3 7.0514E-07 14865 20230619_1887_Aki_TMTPro18x_K_F7 147.42 108.78 255000 222460 241910 272700 334430 397800 351510 376180 452310 79032 78451 63794 76876 57109 139860 95832 94776 72009 235790 204040 248510 272880 340900 392050 356180 377690 438930 96013 98072 65615 81619 61193 138370 94486 90960 68730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166880000 23644 2292 22185 44422;44423 35755 35755 1 9606 Homo sapiens 0.08025054214135707 RTPGRPTSSQSYEQNIK Unmodified 1947.9763 0.97625145 2716 C9JEL3;B9A044;B8ZZ50;Q59FE1;Q53RG0;O60573-2;O60573 EIF4E2;tmp_locus_9 Eukaryotic translation initiation factor 4E type 2 yes no 0 0 2 2.5 0.5 1 1 34.07 34.131 4 5.1041E-18 7315 20230619_1881_Aki_TMTPro18x_K_F2 171.08 129.54 69416 54904 68322 73578 74532 89267 80047 72843 88149 94711 99911 95825 104740 85562 80973 108730 108650 96536 64166 50423 69632 72948 77132 88674 80639 76153 89853 94591 102110 96912 105610 89820 84433 108130 103600 91864 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 187060000 23645 2716 22186 44424;44425 35756;35757 35756 2 9606 Homo sapiens 0.040182374932783205 RTPIGTDR Unmodified 914.49338 0.49337828 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 1 5.5 0.5 1 1 27.213 27.266 3 0.0031056 4873 20230619_1886_Aki_TMTPro18x_K_F6 101.25 32.338 34201 21822 41081 41654 52722 53027 47548 46101 53617 42046 51459 52303 52349 46729 45063 25110 60551 50038 31634 20153 41333 40548 53646 52577 48428 47473 54159 43052 52938 52387 53079 47269 46684 27053 57713 47301 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35567000 23646 4666 22187 44426;44427 35758 35758 1 9606 Homo sapiens 0.032711324691945265 RTPMGLLLEALGQEQEAGS Unmodified 1999.0044 0.004440036 20 B3KN29;A0A024QZ22;O60831;B4DFG8;A6NM71 PRAF2 PRA1 family protein 2 yes no 0 0 1 7.5 0.5 2 2 65.711 65.733 2;3 1.3974E-09 20245 20230619_1888_Aki_TMTPro18x_K_F8 77.192 77.192 15881 14224 13597 12533 11843 13525 16300 15076 16966 12654 15282 16322 15364 13140 14226 17308 16316 20274 14676 13008 13972 12828 12566 13647 16195 15235 17157 13034 15771 16304 15627 13882 14620 17481 15618 19211 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 238450000 23647 20 22188 44428;44429;44430;44431 35759;35760 35760 2 9606 Homo sapiens 0.044897993583845164 RTPSATFQQATK Unmodified 1334.6943 0.69426293 1719;1783 A0A7R6KYT5;E9PR05;A0A3B3ISN4;Q9Y6P1;Q9UPD0;A0A8I5KXR3;Q03164-2;Q03164;Q03164-3 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 no no 0 0 1 3 0 1 37.252 37.305 3 0.0056763 8493 20230619_1882_Aki_TMTPro18x_K_F3 66.215 43.336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23648 1719;1783 22189 44432 35761 35761 1 9606 Homo sapiens 0.040303569951674945 RTPVIDADKPVSSQLR Unmodified 1780.9795 0.97954591 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9;B4DSR6;A0A7P0TAS7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 2 1.5 0.5 1 1 41.441 41.479 4 2.0066E-05 10467 20230619_1881_Aki_TMTPro18x_K_F2 100.45 83.571 138580 111830 124540 136060 126990 156730 130800 133030 173010 173700 179680 198590 182910 169200 167860 218010 202780 209440 128020 102600 127790 135670 132060 156350 133000 138640 174170 174160 184290 199470 185990 177990 173160 217660 193730 199000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 341270000 23649 3881 22190 44433;44434 35762 35762 1 9606 Homo sapiens 0.1202953233791959 RTQEVLQAVAEK Unmodified 1370.7518 0.75177781 3790;4031 Q5CZB5;Q02952-3;Q02952-2;Q02952 DKFZp686M0430;AKAP12 A-kinase anchor protein 12 no no 0 0 1 7 0 1 46.598 46.686 3 0.010271 12050 20230619_1887_Aki_TMTPro18x_K_F7 67.964 39.795 82592 66182 79936 79214 70708 93206 95180 85976 109530 98787 111770 106830 105170 93392 96260 101650 109250 109060 76341 60707 81310 79127 74965 92990 94977 88697 110780 99429 114240 107640 107160 97207 98787 102430 104400 103500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50338000 23650 4031;3790 22191 44435 35763 35763 1 9606 Homo sapiens 0.0812319920075879 RTQGVSTTDLVGR Unmodified 1388.7372 0.73719038 2402 B3KSC8;I3L1L9;B7Z4W6;Q99447-2;Q99447-4;Q99447;Q99447-3;I3L1C4;I3L2Q1;I3L1R7 PCYT2 Ethanolamine-phosphate cytidylyltransferase yes no 0 0 1 8 0 1 35.83 35.819 3 2.1557E-06 7817 20230619_1888_Aki_TMTPro18x_K_F8 122.78 106.11 49848 36611 51141 53455 60034 51341 59803 64649 71289 71947 90290 102330 77297 80929 73060 80244 108920 107840 46073 33666 51974 52575 61536 52406 60694 65319 72706 73214 91247 101720 79237 84099 76383 82175 103860 102140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141430000 23651 2402 22192 44436 35764 35764 1 9606 Homo sapiens 0.05837127052586766 RTQIVYSDDVYK Unmodified 1485.7464 0.74635808 1299 A0A1U9X839;A0A1U9X830;P18615;P18615-3;H9ZYJ1;P18615-4 NELFE;NELF-E Negative elongation factor E yes no 0 0 1 7 0 1 43.856 43.939 3 4.4333E-07 10878 20230619_1887_Aki_TMTPro18x_K_F7 155.81 129.3 136790 119300 144840 157400 147010 173540 155690 159540 170480 192170 210420 204290 226660 194590 170860 226380 220840 230500 126600 109500 146580 156000 152820 173900 157010 164830 174530 192820 214620 206590 228190 202720 177790 227050 210880 218850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144770000 23652 1299 22193 44437 35765 35765 1 9606 Homo sapiens 0.022914756182672136 RTREEEEDSTIEASDQVSDDTVEMPLPK Unmodified 3205.4569 0.45686052 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 2 1.5 0.5 1 1 50.476 50.502 4 1.2781E-38 14706 20230619_1881_Aki_TMTPro18x_K_F2 200.12 189.7 11430 9390 10372 13529 10782 10914 11688 11140 11590 12209 14240 12646 12598 11558 11912 18124 14548 12866 10561 8629.5 10647 13281 11183 11241 11733 11403 11918 12293 14403 12803 12885 12292 12306 17795 13883 12282 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92782000 23653 3440 22194 44438;44439 35766 35766 1 9606 Homo sapiens -0.057649635838970426 RTSIETNIR Unmodified 1088.5938 0.5938206 548 H0YLC5;B3KRE9;A0A024R8Y2;A0A0C4DG88;A0A0A0MT46;A0A345S7Y2;A0A0P0GE07;A0A8A2IE78;P14859-2;P14859;P14859-5;P14859-3;Q9UKI9-3;P14859-4;Q9UKI9-2;Q9UKI9;P14859-6 POU2F3;POU2F1 POU domain protein;POU domain, class 2, transcription factor 1;POU domain, class 2, transcription factor 3 yes no 0 0 1 8 0 1 32.033 32.038 3 0.00079309 6333 20230619_1888_Aki_TMTPro18x_K_F8 93.556 56.364 21731 18765 20092 23997 27478 25722 27256 25837 29038 23975 29753 28317 27570 24077 24704 28924 34649 27776 20088 17219 20679 23822 27915 25893 27541 26346 29488 24469 30386 28424 28086 25223 25740 28913 33008 26419 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22212000 23654 548 22195 44440 35767 35767 1 9606 Homo sapiens 0.05306744732160951 RTSPLDLK Unmodified 928.53418 0.53418046 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2 UBR4 E3 ubiquitin-protein ligase UBR4 no no 0 0 1 1.5 0.5 1 1 41.582 41.62 3 0.085207 10568 20230619_1881_Aki_TMTPro18x_K_F2 39.001 6.0025 176850 153680 191240 176660 199870 184650 190400 190120 220340 204210 213870 194590 223680 177960 176930 190980 223610 200640 163710 140870 193050 176730 206380 186390 193530 194220 222540 205360 219980 197450 225700 184900 183370 192230 213340 190550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63331000 23655 4061 22196 44441;44442 35768 35768 1 9606 Homo sapiens 0.06705473788804284 RTTLDSPLGK Unmodified 1086.6033 0.60332266 2462 B4DEE8;P16455;Q6LDD1;A0A059PXT9;E5BBQ0 MGMT Methylated-DNA--protein-cysteine methyltransferase yes no 0 0 1 1.67 0.471 1 2 41.712 41.75 3 9.9986E-05 10872 20230619_1880_Aki_TMTPro18x_K_F1 132.47 88.7 127930 103110 120250 136570 129480 147040 157690 152920 180970 149720 177690 195920 178540 147810 152310 177230 215280 195550 118230 94678 123060 135290 134570 147990 158040 155770 182760 152900 182600 195140 180990 155620 158940 178580 205230 185610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218560000 23656 2462 22197 44443;44444;44445 35769;35770 35769 2 9606 Homo sapiens 0.06348513017701407 RTTLVDSR Unmodified 946.51959 0.51959303 3165 K7ELV2;Q96EE3;Q96EE3-1;K7EP88;K7ENI5 SEH1L Nucleoporin SEH1 yes no 0 0 1 8 0 1 29.085 29.106 3 0.067754 5327 20230619_1888_Aki_TMTPro18x_K_F8 44.318 19.542 63036 31201 46372 53782 68871 72975 56724 59817 93830 49112 58558 56731 56122 51453 52228 47603 72757 49867 58017 28810 48865 52654 69530 72000 59006 61719 91935 50554 61605 57074 57238 53025 54271 48055 69257 47424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25447000 23657 3165 22198 44446 35771 35771 1 9606 Homo sapiens 0.04419401640654996 RTTWAEER Unmodified 1047.5098 0.50975662 4460 Q9BX40;Q9BX40-2 LSM14B Protein LSM14 homolog B yes no 0 0 1 4 0 1 30.278 30.345 3 0.02701 5673 20230619_1883_Aki_TMTPro18x_K_F4 62.303 33.904 22345 17038 26903 27187 33319 37816 26837 26269 33840 26659 20322 22306 22401 23207 25475 20648 27540 18681 20688 15683 27046 26737 33935 37151 27649 27642 33550 26822 21602 22848 22982 23756 25933 20705 26268 17796 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20118000 23658 4460 22199 44447 35772 35772 1 9606 Homo sapiens -0.012097863647341 RTVDLSSHLAK Unmodified 1225.6779 0.67788459 3384 P04843;Q6IBR0;Q53EP4;B4DL99;F8WF32 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 1 2 0 1 38.769 38.836 4 0.00294 9273 20230619_1881_Aki_TMTPro18x_K_F2 79.82 49.25 545090 375910 459870 535470 507470 590250 503740 530250 644260 604760 650160 775760 660250 527290 392900 733850 869160 745660 502880 345660 475400 528090 523950 591110 512610 547910 648600 612340 667580 771020 661160 563030 432340 733700 826140 708560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 762870000 23659 3384 22200 44448 35773 35773 1 9606 Homo sapiens 0.07407275829086757 RTVETEAVQMLK Unmodified 1403.7442 0.74424959 743 B4DSD7;E9PFR3;A0A024RD11;Q14738;A8K6Y2;Q14738-2;Q59EF0;H0Y8C4;Q14738-3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform yes no 0 0 1 7 0 1 49.859 49.94 3 0.00040123 13552 20230619_1887_Aki_TMTPro18x_K_F7 101.38 63.22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23660 743 22201 44449 35774 35774 1 9606 Homo sapiens 0.05852723608791166 RTVGDQMK Unmodified 933.4702 0.4702 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 1 8 0 1 32.813 32.814 3 0.032022 6654 20230619_1888_Aki_TMTPro18x_K_F8 62.582 18.135 24544 11026 30582 32033 45816 48563 31662 45775 44094 13594 22633 21491 18891 15263 31638 7928.9 23669 16026 22678 10285 30795 30794 45998 47734 33152 46046 43261 15745 24084 21261 20001 15571 31371 8620.3 22671 15163 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9375100 23661 3337 22202 44450 35775 35775 1 9606 Homo sapiens 0.0008037036020596133 RTVSDNSLSNSR Unmodified 1334.6539 0.65385468 1849 B7ZL14;A0A994J3U5;A0A994J4A3;H0Y7W6;B7ZL13;A0A994J6U4;A0A994J3V8;A0A8V8TQ35;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 FNBP1 Formin-binding protein 1 yes no 0 0 1 6 0 1 28.241 28.273 3 0.0027084 5174 20230619_1886_Aki_TMTPro18x_K_F6 73.877 45.169 6484.3 3920.1 5928.1 6132.5 6632.7 6608.4 6383.1 9694.1 7432.8 4882.3 8032.6 7184.3 9641.7 8211.7 7316.9 4867.6 8302.4 9113.4 5981.8 3611 6078.6 6019.2 6824 6713.4 6493 9550.8 7525 5262.4 8275.7 7229.6 9677.4 8265.9 7521.3 5192.1 7939.8 8608 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7095500 23662 1849 22203 44451 35776 35776 1 9606 Homo sapiens -8.609395240455342E-05 RTWDAAER Unmodified 1003.4835 0.48354187 628 E9PF17;A0A024RAP3;A0A024RAL1;A0A024RAQ9;Q59FG9;P13611-4;P13611-3;P13611-2;P13611-5;P13611;B7Z3R6;Q6MZK8 VCAN;CSPG2;DKFZp686K06110 Versican core protein yes no 0 0 1 4 0 1 30.84 30.904 3 0.03099 5911 20230619_1883_Aki_TMTPro18x_K_F4 62.201 40.115 43958 22927 37120 37256 51469 48961 47977 44816 72599 53655 72333 80579 68084 65532 65634 60699 86179 75265 40502 21147 38485 36582 52233 48526 49312 46318 72465 54619 74087 80029 69580 67802 67882 61919 82181 71373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14127000 23663 628 22204 44452 35777 35777 1 9606 Homo sapiens -0.018060555362012565 RTYEEGLK Unmodified 994.50836 0.50835964 2088 V9HW72;A8K690;P31948;P31948-2;F5H783;F5GXD8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 1 5 0.816 1 1 1 36.655 36.723 3 0.00028107 8150 20230619_1885_Aki_TMTPro18x_K_F5 143.03 96.608 1127100 652630 866340 1073000 819340 1137400 898690 1071800 1508200 1478900 1619100 1887900 1783600 1671700 917420 1720600 2270700 1982300 1038300 601700 902430 1049000 860750 1142600 920910 1110100 1506300 1485600 1663300 1889500 1776400 1733500 1027000 1740500 2157500 1881100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2213700000 23664 2088 22205 44453;44454;44455 35778;35779;35780;35781 35779 4 9606 Homo sapiens 0.010885795465242154 RVAAALPGMESTQDR Unmodified 1600.7991 0.79913871 342 P20340;A0A024R5J5;P20340-2;A0A024R5H8;Q6FGX3;Q53ET8;P20340-4;B7Z5Z9;P20340-3;F5H3K7 RAB6A Ras-related protein Rab-6A yes no 0 0 1 6.5 0.5 1 1 41.357 41.44 3 3.8342E-11 9850 20230619_1887_Aki_TMTPro18x_K_F7 165.89 147.11 40070 34132 39711 41251 40472 42226 42866 41627 52123 43916 54320 52504 58260 54000 52764 51426 55287 56424 37059 31304 40386 41094 42035 42623 43375 42644 52628 44551 55787 52980 59100 55499 53881 52014 52882 53535 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92182000 23665 342 22206 44456;44457 35782 35782 1 9606 Homo sapiens 0.022771104094317707 RVAAMSVAQR Unmodified 1087.592 0.59204647 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 1 4 0.816 1 1 1 32.686 32.756 3 0.00037674 6636 20230619_1883_Aki_TMTPro18x_K_F4 100.72 50.438 118430 109630 112600 94924 159720 190420 144980 135870 205450 31349 40127 42887 41400 40902 52042 33673 48755 43833 109550 100230 115500 98410 162010 184060 148710 139740 198720 38041 49049 43029 42844 41856 52444 34591 46646 41543 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84929000 23666 3246 22207 44458;44459;44460 35783;35784 35783 2 9606 Homo sapiens 0.05175412442576999 RVAAPQDGSPR Unmodified 1152.6 0.59996862 2365 B3KNT3;Q9HD15 SRA1 Steroid receptor RNA activator 1 yes no 0 0 1 5.5 0.5 1 1 27.461 27.514 3 1.2351E-06 4925 20230619_1886_Aki_TMTPro18x_K_F6 135.1 117.63 29502 23328 26751 40086 40559 40528 35003 37786 45054 32199 38813 36888 40926 29970 31102 21320 41191 33791 27253 21490 27686 39060 40876 40871 35918 38650 45044 33006 40180 36980 41209 30727 32294 22300 39263 31990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26889000 23667 2365 22208 44461;44462 35785;35786 35786 2 9606 Homo sapiens 0.029772629636909187 RVAIDNTNPDAASR Unmodified 1498.7488 0.7488177 1024 A0A0D9SFL2;M0QYH2;A0A1S5RA93;Q96T60-2;Q96T60 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3'-phosphatase;Polynucleotide 5'-hydroxyl-kinase yes no 0 0 1 4.5 0.5 1 1 33.466 33.535 3 7.9083E-09 6946 20230619_1883_Aki_TMTPro18x_K_F4 159.41 139.19 33685 23401 31300 29779 36416 32953 32274 33861 39863 36095 46460 46949 43428 40498 38250 39557 46338 46936 31100 21491 32049 29601 37270 33122 33034 34588 40424 36694 47219 46948 44199 41924 39440 40182 44262 44499 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46585000 23668 1024 22209 44463;44464 35787;35788 35787 2 9606 Homo sapiens 0.019393240759654873 RVAIFIEK Unmodified 974.5913 0.59130141 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 1 5.14 1.81 2 1 1 1 1 1 48.692 48.762 2;3 0.00089201 13214 20230619_1885_Aki_TMTPro18x_K_F5 111.06 44.709 185160 155870 165080 161680 157960 170340 167080 181110 184640 184290 182630 166210 198320 157680 176020 189560 195380 183290 171090 142760 169220 163050 164910 171930 168580 184300 187100 185510 188040 169350 200790 164690 180510 189600 186670 174200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 673720000 23669 617 22210 44465;44466;44467;44468;44469;44470;44471 35789;35790 35790 2 9606 Homo sapiens 0.10298941065184408 RVAMIDETR Unmodified 1089.5601 0.56007764 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463;Q3B7X4 IMMT MICOS complex subunit MIC60 yes no 0 0 1 5 0 1 35.291 35.381 3 0.0052634 7740 20230619_1885_Aki_TMTPro18x_K_F5 74.162 49.307 27813 21297 26955 28883 28262 37814 35073 34624 46445 31184 38455 38272 37354 31036 32931 36402 39154 37325 25701 19564 27499 28654 29507 37458 35305 35498 46284 31947 39774 38300 37952 32535 33926 36539 37389 35449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29180000 23670 3954 22211 44472 35791 35791 1 9606 Homo sapiens 0.018879999687669624 RVAPVLIR Unmodified 922.60762 0.60762018 1670 P30419;A0A7I2V539;Q96HI4;P30419-2;A0A7I2V3X4;A0A7I2V3U5;B4DHU9;B2RCF3;Q5VUC6;B3KT39;B4DXS1;Q5VUC7;O60551 NMT1;NMT2 Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase;Glycylpeptide N-tetradecanoyltransferase 2 yes no 0 0 1 6 0.816 1 1 1 38.244 38.321 3 0.0031409 8849 20230619_1886_Aki_TMTPro18x_K_F6 101.28 56.889 188190 137390 154930 161720 155250 192580 182100 194380 277190 93915 99559 82820 94166 80597 132920 111410 133210 86308 173640 126050 160220 161770 162390 192360 184860 195720 269260 100330 110220 84718 98239 84809 134350 110130 127120 82414 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158920000 23671 1670 22212 44473;44474;44475 35792 35792 1 9606 Homo sapiens 0.14322067021942075 RVAQDWLK Unmodified 1014.5611 0.56106391 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463;Q3B7X4 IMMT MICOS complex subunit MIC60 yes no 0 0 1 2 0 1 45.424 45.505 3 0.0019368 12351 20230619_1881_Aki_TMTPro18x_K_F2 112.11 61.984 246490 226140 225070 220940 339590 426340 328530 340790 476990 47818 53828 67881 61903 55589 95186 58070 73670 68704 227930 206960 232230 226330 344110 413400 336020 346040 459240 65537 75661 67810 64740 57864 94805 59035 70661 65161 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139390000 23672 3954 22213 44476 35793 35793 1 9606 Homo sapiens 0.05436582399988765 RVASSPAPPEGPSHPR Unmodified 1640.8383 0.83830141 3220 O14578;O14578-4;A0A7I2V365;A0A7I2V4A6;A0A7I2V4I0;A0A7I2V692;A0A7I2V4H7;H7BYJ3;O14578-3 CIT Citron Rho-interacting kinase yes no 0 0 1 8 0 1 28.386 28.412 4 8.8775E-05 5095 20230619_1888_Aki_TMTPro18x_K_F8 95.067 80.506 4170.1 2620.8 3339 2639.5 3696.8 3698.6 4489.7 3685.7 4251.4 3651 4208.6 3206.1 3958 3014.6 2737.4 3421 4640.6 4139.2 3844.1 2402.8 3462.4 2681.7 3830.2 3661.6 4471.2 3765.6 4339.8 3679.5 4300.7 3272.2 3988.9 3141.2 2913.5 3469.2 4418.3 3925.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4294000 23673 3220 22214 44477 35794 35794 1 9606 Homo sapiens 0.04351578755313312 RVATPVDWK Unmodified 1070.5873 0.58727866 3527 V9HWC7;P30041 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 1 3 0.816 1 1 1 44.729 44.796 3 0.00057907 12026 20230619_1881_Aki_TMTPro18x_K_F2 110.84 83.534 1528600 1244600 1358900 1439900 1720700 2007700 1848600 1870200 2336400 1863700 1921900 2100000 2206400 1824800 1935100 2274600 2428600 2356300 1412200 1141200 1400900 1445700 1764000 1983700 1870800 1919200 2335100 1892100 2004900 2112000 2230400 1915400 2001600 2282000 2318400 2237400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2821700000 23674 3527 22215 44478;44479;44480 35795;35796 35795 2 9606 Homo sapiens 0.054808515714512396 RVATWFNQPAR Unmodified 1344.7051 0.70510239 2040 Q6NZ55;A8K4C8;P26373;J3QSB4;P26373-2;H3BTH3;B4DGL7 RPL13 60S ribosomal protein L13 yes no 0 0 1 7.5 0.5 1 1 43.539 43.584 3 5.2979E-05 10911 20230619_1888_Aki_TMTPro18x_K_F8 132.56 102.23 227880 227600 232080 207150 218120 304110 256660 252920 298830 112550 97630 97467 112800 85462 133990 124640 116740 90010 211040 208120 235140 212360 229230 298920 257740 258120 293440 121190 110400 99392 115680 90630 134860 122730 111680 85957 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199540000 23675 2040 22216 44481;44482 35797;35798 35798 2 9606 Homo sapiens 0.04653804160125219 RVCEEIAIIPSK Unmodified 1413.765 0.76498503 3066 H3BNC9;P08708;H0YN88;A0A075B716;H0YN73 RPS17 40S ribosomal protein S17 yes no 0 0 1 7.5 0.5 1 1 49.686 49.765 3 0.00023245 13423 20230619_1887_Aki_TMTPro18x_K_F7 97.86 70.531 367980 275800 313860 334300 294420 353890 363910 378620 408530 398260 369550 365370 484340 374240 310350 543390 438820 439200 339670 253080 323220 333140 309610 356870 364320 385530 412300 400470 385800 373110 482300 394740 327030 536780 418620 418260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5381500000 23676 3066 22217 44483;44484 35799;35800 35799 2 9606 Homo sapiens 0.07465313988473099 RVCTNPVDR Unmodified 1115.5506 0.55057558 4749 Q9Y5Q8-2;Q9Y5Q8;Q9Y5Q8-3;Q5T7U4;B7Z1V3;Q5T7U0;H7BY84 GTF3C5 General transcription factor 3C polypeptide 5 yes no 0 0 1 6.5 0.5 1 1 28.721 28.831 3 0.001235 5590 20230619_1886_Aki_TMTPro18x_K_F6 97.472 77.71 11978 7035 8182.3 10727 13311 15457 12531 12989 14367 11980 12969 14613 11745 10326 13706 10388 13596 12606 11027 6479.2 8722.1 10581 13418 15206 12731 13409 14471 12245 13335 14558 12121 10796 13878 10575 13003 11954 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 10198000 23677 4749 22218 44485;44486 35801;35802;35803 35801 3 9606 Homo sapiens -0.002577683167601208 RVDALNDEIR Unmodified 1199.6258 0.62584901 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 1 3 0.816 1 1 1 38.899 38.954 3 3.9048E-06 9160 20230619_1882_Aki_TMTPro18x_K_F3 152.67 97.56 324650 235030 279800 316020 299960 324660 354760 314900 412700 353190 397360 386550 385550 316020 338230 410470 405380 381120 299640 215930 288510 312530 311550 327400 356170 323580 416280 356030 407780 388650 391610 333280 348870 409120 387050 362390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 460370000 23678 4191 22219 44487;44488;44489 35804;35805 35805 2 9606 Homo sapiens 0.034021124153241544 RVDAVIPPYPR Unmodified 1281.7194 0.71935547 2802 CON__Q3ZBS7 yes yes 0 0 1 2 0.816 1 1 1 44.753 44.805 3 3.5858E-09 12008 20230619_1881_Aki_TMTPro18x_K_F2 167.2 136.63 + 156950 122550 163460 234210 341610 408880 254760 251400 484340 758440 1351100 2085900 821830 1030400 1526600 871810 1148500 1817000 145130 113080 168680 229130 339120 396410 269390 281840 514400 778510 1328200 2017600 890440 1087900 1515800 933590 1107200 1713400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3228499999.9999995 23679 2802 22220 44490;44491;44492 35806;35807;35808 35806 3 9606 Homo sapiens 0.0897645658840247 RVDHCPIK Unmodified 1023.5284 0.52838358 1472 Q53XJ5;A0A384NLA0;A0A494C1N0;P26885;F5H0N4 FKBP2 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase FKBP2 yes no 0 0 1 5.33 3.09 1 1 1 31.032 31.068 4 0.055659 5988 20230619_1888_Aki_TMTPro18x_K_F8 57.859 34.43 139170 83515 124120 132400 160760 171510 141420 162900 230000 79217 81836 75249 71095 62147 107180 72204 115270 75793 128350 76947 127920 130130 163730 170180 146370 164700 222900 84720 90470 76212 74734 65075 108590 72716 109940 72096 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114460000 23680 1472 22221 44493;44494;44495 35809;35810 35810 2 9606 Homo sapiens 0.017560520054985318 RVDIIPGFEFDR Unmodified 1462.7569 0.75686319 4514 Q9H4A4;A6NKB8;Q7RU04 RNPEP Aminopeptidase B yes no 0 0 1 7.5 0.5 1 1 57.571 57.624 3 9.9086E-10 16793 20230619_1887_Aki_TMTPro18x_K_F7 157.33 127.65 60482 48590 50591 54821 40188 52629 53584 58150 63418 61959 62038 77598 82967 72723 62154 86082 81530 88784 55844 44545 52092 54846 43030 53504 53581 59129 64013 62888 64723 77887 83059 75866 64770 86369 77870 84272 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 443100000 23681 4514 22222 44496;44497 35811 35811 1 9606 Homo sapiens 0.04399503063359589 RVDPDVAQHWAK Unmodified 1420.7211 0.72114638 177 K7ERG2;A0A024R1Z4;H7BXP1;Q9NYR9-3;Q9NYR9-2;Q9NYR9 NKIRAS2 NF-kappa-B inhibitor-interacting Ras-like protein 2 yes no 0 0 1 7.5 0.5 1 1 41.936 41.97 4 0.018392 10297 20230619_1888_Aki_TMTPro18x_K_F8 64.65 50.687 77317 68517 95507 78425 151400 158810 119790 118530 158390 100020 104280 115780 103290 91776 90474 101400 129080 134570 71669 62799 96242 79453 151940 153580 123740 123300 156890 102710 109560 115970 104940 96001 94414 103560 123170 127440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 43788000 23682 177 22223 44498;44499 35812;35813 35813 2 9606 Homo sapiens 0.027614656063406073 RVDPVYIHLAER Unmodified 1466.7994 0.7993967 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8;B4DIG6;B4DWK9;B4DIW1;B4DK31;B4DIR2 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 1 7.5 0.5 1 1 42.507 42.546 4 7.6684E-05 10518 20230619_1888_Aki_TMTPro18x_K_F8 116.98 104.77 90158 75113 85519 79791 52305 57887 61948 63922 68941 80505 86795 78066 89172 74418 79457 115400 93427 89363 83341 68813 86698 79981 57240 60390 62223 65370 70589 80374 88250 79353 90471 79018 81941 113740 89227 85168 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 198210000 23683 3833 22224 44500;44501 35814;35815 35815 2 9606 Homo sapiens 0.08466898191613836 RVEAAQETVADYQQTIK Unmodified 1948.9854 0.98541915 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;Q6AWB1;Q6AWB3;Q59F36;O95654 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 0 1 5.5 0.5 1 1 47.431 47.509 3 1.3583E-18 12818 20230619_1886_Aki_TMTPro18x_K_F6 184.92 164.25 104690 80264 90652 108060 95704 105230 103590 103930 122690 141030 131840 131300 154740 117630 123510 156470 144390 156940 96658 73726 93433 106780 99276 106590 104600 107270 124410 140210 135810 133280 155630 123930 127480 156530 138040 149020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 263000000 23684 1717 22225 44502;44503 35816;35817 35817 2 9606 Homo sapiens 0.0488858605895075 RVEDVLGK Unmodified 914.51853 0.5185304 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 7 0 1 43.824 43.907 3 0.0035025 10841 20230619_1887_Aki_TMTPro18x_K_F7 103.7 43.11 394640 297600 334950 366840 418500 402420 429950 408270 509130 474920 552940 537040 559310 457710 471350 599100 610760 545320 364270 273130 346620 365270 428160 404550 435210 418530 515800 478350 565320 539980 566450 482170 489220 596390 582570 518760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 283590000 23685 3881 22226 44504 35818 35818 1 9606 Homo sapiens 0.05785187271760606 RVEEELEK Unmodified 1030.5295 0.52948901 781 A0A024RDW4;Q9NWB6;B4E3J6;Q9NWB6-3;Q9NWB6-2 FLJ10154;ARGLU1 Arginine and glutamate-rich protein 1 yes no 0 0 1 2 0 1 39.348 39.417 3 0.011836 9549 20230619_1881_Aki_TMTPro18x_K_F2 74.6 12.399 295380 258010 275410 284610 349660 398060 330390 339860 427490 301870 368720 342130 319900 290760 274740 304140 383110 352040 273100 236410 282630 286780 357110 392590 337200 350110 427160 308630 378650 343870 326150 302300 286290 308040 365300 333970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 451410000 23686 781 22227 44505 35819 35819 1 9606 Homo sapiens 0.01544544855391905 RVEELVAK Unmodified 942.54983 0.54983053 781 A0A024RDW4;Q9NWB6;B4E3J6;Q9NWB6-3;Q9NWB6-2 FLJ10154;ARGLU1 Arginine and glutamate-rich protein 1 yes no 0 0 1 7 0 1 42.214 42.289 3 0.0019925 10169 20230619_1887_Aki_TMTPro18x_K_F7 111.61 30.012 279190 217320 213950 261180 310190 314340 296000 287700 358240 325820 351270 317250 357840 300390 292880 372760 383940 339450 257590 199370 224480 260800 314230 313310 301080 296750 361120 327110 360700 322110 361980 314230 304410 371350 366160 322930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 314960000 23687 781 22228 44506 35820 35820 1 9606 Homo sapiens 0.07625760305847962 RVEGPGSLGLEESGSR Unmodified 1628.8118 0.81181188 3825 Q561W4;Q12972;A0A0A0MT09;Q38J66;Q12972-2;Q6ICT4;Q12972-3 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay yes no 0 0 1 3.5 0.5 1 1 40.166 40.215 3 2.045E-42 9593 20230619_1883_Aki_TMTPro18x_K_F4 268.42 238.88 64235 49960 52857 69483 66296 76746 70417 78478 89260 78116 91587 101290 106310 92259 76416 110650 110810 119800 59291 45905 54953 68625 67994 77062 71347 80030 89926 79691 94528 101510 106660 96427 80320 111300 105750 113650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142610000 23688 3825 22229 44507;44508 35821 35821 1 9606 Homo sapiens 0.022558450733413338 RVEHNQVGEK Unmodified 1194.6105 0.6105333 675 A0A024RBH7;P42167-2;Q59G12 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 0 0 1 5 0 1 27.364 27.437 4 0.00018793 4826 20230619_1885_Aki_TMTPro18x_K_F5 106.62 58.195 16925 11887 17618 21326 29389 24622 31552 37820 44410 25258 24678 28226 18391 24955 31665 20799 37799 29844 15641 10962 18039 20801 29606 24946 32060 37354 43662 26309 26020 28391 19688 25601 32238 21512 36052 28279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9214200 23689 675 22230 44509 35822 35822 1 9606 Homo sapiens 0.021012456181324524 RVEILNEHRGEK Unmodified 1478.7954 0.79537396 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;Q6NSG3;Q58F29;Q6P169;C9JR83 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 2 6.5 0.5 1 1 33.309 33.373 5 8.7791E-07 6652 20230619_1887_Aki_TMTPro18x_K_F7 153.81 122.58 117050 111080 115710 107930 128570 109270 123720 124010 119440 127510 139080 116580 140310 98058 120270 146530 148280 109190 108330 101640 117750 109410 132100 110900 124950 125750 122770 128280 141660 118370 142080 104370 124330 144310 141330 104250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72974000 23690 4593 22231 44510;44511 35823;35824 35824 2 9606 Homo sapiens 0.07512808697879336 RVEIMEEESEQ Oxidation (M) 1393.6031 0.60312424 1976 A6NJA2;B2RD79;P54578-2;P54578-3;P54578;D3DUG9 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 1 1 1 0 1 37.489 37.489 2 0.00029256 8957 20230619_1880_Aki_TMTPro18x_K_F1 117.3 114.45 37797 30333 27469 33702 35709 37974 36359 38242 43401 41336 51427 41642 43001 39051 41823 52985 47822 53665 34867 27804 28923 33819 36481 38094 36843 39122 44110 41624 51947 42240 44117 41097 42947 53021 45738 50943 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91557000 23691 1976 22232 44512 35825 35825 1249 1 9606 Homo sapiens -0.07793319555116796 RVEIMEEESEQ Unmodified 1377.6082 0.60820962 1976 A6NJA2;B2RD79;P54578-2;P54578-3;P54578;D3DUG9 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 1 1 0 1 43.091 43.091 2 4.6369E-06 11462 20230619_1880_Aki_TMTPro18x_K_F1 148.69 128.36 86436 75031 85463 75588 73715 83960 87153 87416 101850 111120 108530 107100 119710 96292 100640 127350 122120 124330 79948 68697 86662 76484 77896 84386 87588 89678 103260 110890 111500 108570 120890 101360 104010 127220 116650 118110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140760000 23692 1976 22232 44513 35826 35826 1 9606 Homo sapiens -0.06549015692485227 RVELSGPK Unmodified 884.50797 0.50796571 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q1WWK5;B4DTL7;K7ENL0;K7EPY1;K7EJV0 SEPT9 Septin-9 yes no 0 0 1 4.5 3.5 1 1 37.566 37.559 3 0.0014462 9009 20230619_1880_Aki_TMTPro18x_K_F1 116.52 73.653 845970 695720 785590 792880 873680 869750 912000 915900 1206300 1012500 1186300 1098400 1066100 888310 1045700 1089600 1327300 1037500 781810 637800 804320 794130 901420 875170 926400 935000 1210500 1021000 1212100 1104500 1091200 933810 1079400 1088800 1265200 987020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 661240000 23693 541 22233 44514;44515 35827;35828 35827 2 9606 Homo sapiens 0.06109204617337127 RVENAGGSPSPEPAGR Unmodified 1579.7703 0.77028142 2469 H0Y9X4;B4DEV9;Q9HA92-2;Q9HA92 RSAD1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial yes no 0 0 1 3.5 0.5 1 1 28.719 28.811 3 0.0071015 5163 20230619_1883_Aki_TMTPro18x_K_F4 67.415 58.685 3216.2 2922.6 1512.7 3249.5 5605 4925.3 4380.8 5770.8 5603.6 5156.8 4027.8 4608.3 4639.7 5899.6 5314.9 3240.8 6044.5 5564.3 2962.9 2677.8 1749.9 3275.6 5461.5 4875.5 4522.5 5812.1 5581.8 5229.1 4240 4739.4 4763 5898.6 5420.5 3437.8 5772.9 5262.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5858500 23694 2469 22234 44516;44517 35829 35829 1 9606 Homo sapiens 0.0035870910464836925 RVENSIPAAGETQNVEVAAGPAGK Unmodified 2364.2034 0.20335085 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DYA2;B4DRG9 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 1 5.5 0.5 1 1 45.743 45.825 3 1.5880999999999998E-19 11991 20230619_1885_Aki_TMTPro18x_K_F5 156.23 143.38 23036 19646 25709 27792 22079 25933 26512 27453 26573 30269 32456 32328 33827 28450 28656 34788 35071 36005 21327 18048 25854 27368 23338 26390 26495 28021 27317 30490 33080 32602 34235 29813 29618 34907 33500 34181 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 110430000 23695 1555 22235 44518;44519 35830;35831 35830 2 9606 Homo sapiens 0.07581731190748542 RVEPLRNELQK Unmodified 1380.7837 0.78374664 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 2 4.5 3.5 1 1 38.604 38.598 4 8.8446E-05 8914 20230619_1888_Aki_TMTPro18x_K_F8 131.17 99.679 245230 176500 258050 235070 278240 283440 282220 278710 344660 274490 297370 277170 301540 231250 292410 313710 362140 310700 226690 162150 261210 233270 287370 282850 286260 284900 345500 277840 307400 279880 307130 244540 301440 313690 345470 295330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 368020000 23696 3881 22236 44520;44521 35832;35833 35833 2 9606 Homo sapiens 0.10858611674552776 RVEPQTEDDLFPCTCHR Unmodified 2158.9524 0.95242124 4134 Q6UW63 KDELC1 KDEL motif-containing protein 1 yes yes 0 0 1 3 0 1 41.483 41.545 4 0.030415 10274 20230619_1882_Aki_TMTPro18x_K_F3 49.395 39.474 48183 37481 42643 47032 50321 59913 54066 56372 52362 61795 69220 76187 67135 56960 57706 66031 76922 77043 44498 34400 43931 46876 51794 59509 54263 57965 54145 62562 70176 76007 68145 59876 59950 66801 73414 73059 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109590000 23697 4134 22237 44522 35834 35834 1 9606 Homo sapiens -0.08069687327088104 RVEQEIK Unmodified 900.50288 0.50288033 89 H0Y612;A0A024R0F6;Q9UPN9-2;Q9UPN9 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 0 0 1 4.5 0.5 1 1 34.986 35.055 3 0.013124 7562 20230619_1885_Aki_TMTPro18x_K_F5 90.709 20.804 44299 19519 44257 52668 48979 62523 48066 61025 63799 42099 69670 85036 58211 56866 45380 29718 86971 69486 40844 18179 45091 50516 50571 62340 49045 61929 64209 44876 70775 83317 59252 58143 48564 32592 82691 65641 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23031000 23698 89 22238 44523;44524 35835 35835 1 9606 Homo sapiens 0.04864900754705559 RVEQLAGER Unmodified 1056.5676 0.56760585 3968;2412 B3KTC8;B7ZKJ7;Q3KQV9 UAP1L1 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 no no 0 0 1 4.5 0.5 1 1 32.534 32.604 3 0.00027167 6614 20230619_1885_Aki_TMTPro18x_K_F5 121.9 28.25 122830 78295 129550 132050 155170 168620 145220 163060 178100 143660 212450 245430 175990 185510 212060 136030 242440 213600 113470 72175 131440 129350 158880 167510 148100 166420 180710 149340 215050 242300 182750 190580 216230 142120 231470 202160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84467000 23699 2412;3968 22239 44525;44526 35836;35837 35837 2 9606 Homo sapiens 0.041584755607118495 RVETALEACSLPSSR Unmodified 1674.8359 0.83591814 804 Q9NQ66;A0A0D9SF51;Q9NQ66-2;A0A087WT80;A0A087WW73;A0A1B0GWB6;A0A0D9SG17;B4DRC6;A0A0D9SFJ4;A0A0D9SFE7;B1AK73;A0A0D9SFA6 PLCB1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1;Phosphoinositide phospholipase C yes no 0 0 1 7 0 1 42.849 42.924 3 4.3994E-19 10440 20230619_1887_Aki_TMTPro18x_K_F7 211.12 185.16 60925 46376 53982 77199 53943 63112 60710 68165 73304 71356 70385 78292 83777 68580 60822 92493 90105 83068 56258 42710 55556 75171 56278 64955 61234 69393 73872 72146 72965 78852 84004 72318 64039 91939 85880 79024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68610000 23700 804 22240 44527 35838 35838 1 9606 Homo sapiens 0.02549362235345143 RVETSEHFR Unmodified 1159.5734 0.57341951 668 A0A024RBE7;P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 0 0 1 6.5 1.5 1 1 27.493 27.544 3 0.0029598 4839 20230619_1885_Aki_TMTPro18x_K_F5 86.898 49.707 10015 8726.5 12825 11338 14564 13049 14406 13308 10384 11335 13519 14186 11464 9032.3 13069 11855 15486 15337 9286 8008.8 12809 11262 14941 13078 14416 13529 10934 11637 13645 14096 11838 9643.2 13388 12065 14793 14531 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15783000 23701 668 22241 44528;44529 35839;35840 35839 2 9606 Homo sapiens 1.5740723711132887E-05 RVFAECNDESFWFR Unmodified 1861.8206 0.82060243 593 A0A024R9U3;Q9NX40;D6R918;D6RBC5;D6RDI5;D6RA54;D6RC55;D6RG39;D6RIT9;Q9NX40-3;Q9NX40-2;Q9NX40-4;D6RF07 OCIAD1 OCIA domain-containing protein 1 yes no 0 0 1 7 0 1 56.502 56.56 3 1.858E-29 16410 20230619_1887_Aki_TMTPro18x_K_F7 223.7 220.04 51152 43262 54038 54598 51325 54550 52606 59536 69830 53043 50738 63233 58913 52493 76149 61253 68836 77873 47331 39696 54608 54220 53565 55282 53523 60296 69375 54284 53445 63335 60711 54978 76644 62385 65995 73755 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117210000 23702 593 22242 44530 35841 35841 1 9606 Homo sapiens -0.07583504561898735 RVFITDDFHDMMPK Unmodified 1750.8171 0.81709696 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;A0A7P0TBC2 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 1 7.5 0.5 1 1 54.763 54.828 4 0.00047872 15706 20230619_1888_Aki_TMTPro18x_K_F8 92.063 50.523 221580 191720 232190 241980 188160 224070 238270 245920 249420 264170 239710 236230 268130 229150 279120 276870 276490 318140 205040 175900 234400 240060 200340 228400 237800 250210 253230 265100 247720 240880 273280 239260 283490 279760 264860 301580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 527620000 23703 3452 22243 44531;44532 35842;35843 35843 2 9606 Homo sapiens -0.028278906601144627 RVFNDCR Unmodified 965.45013 0.45013326 1073 A0A0S2Z3H8;A0A7I2V5R6;Q5JWF2;Q5JWF2-2;P63092-4;P63092-3;P63092;P63092-2;Q5JWE9;A0A0S2Z3S5;Q14455;A0A590UJQ9;A0A590UK28;Q5FWY2;A0A804HIH4;B0AZR9;A0A0A0MR13;A0A590UJF0;A0A590UJY2;O60726;Q8N2B4;P38405-2;A8K1Y9;P38405;O75633;O75632;B4DHG7 GNAS;GSA;GNAL Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(olf) subunit alpha no no 0 0 1 7 0.816 1 1 1 29.862 29.914 3 0.045163 5622 20230619_1888_Aki_TMTPro18x_K_F8 61.962 32.389 58621 49124 61410 50491 77458 66994 68989 72373 82325 52269 62606 51191 57399 50097 56368 55716 66285 44614 54235 44991 62302 51160 78820 66681 70465 72990 82230 53920 64859 52053 58726 51986 57871 55295 63175 42572 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85441000 23704 1073 22244 44533;44534;44535 35844;35845 35845 2 9606 Homo sapiens -0.03397380579747278 RVGDNDFLEVR Unmodified 1318.663 0.6629628 155 A0A024R1S5;O00178;B2RDW9;F5H716;F5H257 GTPBP1 GTP-binding protein 1 yes no 0 0 1 3.5 0.5 1 1 44.432 44.49 3 2.8474E-09 11530 20230619_1883_Aki_TMTPro18x_K_F4 154.85 132.62 115480 71242 101680 122890 82856 115830 89674 104750 138940 132400 155820 165620 165480 162630 102490 193840 205620 234120 106510 65705 104290 119650 88071 117280 91640 108540 139390 133400 159440 166600 165850 169460 111530 196240 195940 221830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109570000 23705 155 22245 44536;44537 35846 35846 1 9606 Homo sapiens 0.01637783961086825 RVGEYQR Unmodified 906.46716 0.46716353 2856 D6W4Z6;P31350;P31350-2;A0A7P0SBL1;B3KS26;Q8N6S3 hCG_23833;RRM2 Ribonucleoside-diphosphate reductase subunit M2 yes no 0 0 1 5.5 0.5 1 1 26.245 26.298 3 0.021185 4568 20230619_1886_Aki_TMTPro18x_K_F6 75.854 48.329 34433 13789 40033 40025 42117 49240 33487 39747 42546 28500 39838 30223 28996 25804 33524 13563 32826 21390 31780 12873 40225 38326 43376 48810 34585 40949 42662 29488 40465 30461 30154 26123 33854 14341 31335 20275 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40900000 23706 2856 22246 44538;44539 35847 35847 1 9606 Homo sapiens 0.010188632977133238 RVGFQYEGTYK Unmodified 1346.6619 0.66190017 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;Q0PHS4 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 1 1.5 0.5 1 1 44.128 44.169 3 0.0020674 11940 20230619_1880_Aki_TMTPro18x_K_F1 83.226 60.486 97243 68448 94480 98360 118030 126040 122130 117310 147180 116770 141330 134430 134060 120430 130200 138090 170380 133890 89818 62942 96592 97206 120840 125120 123640 120430 148150 118650 144920 135270 136970 125570 134710 138240 162380 127350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 630120000 23707 1464 22247 44540;44541 35848;35849 35848 2 9606 Homo sapiens 0.0024356959218039265 RVGGVQSLGGTGALR Unmodified 1426.8005 0.80045934 1234 Q2TU84;A0A140VK69;P17174;P17174-2;B7Z1I2 GIG18;GOT1 Aspartate aminotransferase;Aspartate aminotransferase, cytoplasmic yes no 0 0 1 5 0 1 39.101 39.192 3 2.8651E-05 9195 20230619_1885_Aki_TMTPro18x_K_F5 101.3 65.019 54140 44514 49859 55514 49644 77827 60727 55700 103660 61340 74685 76054 73954 64959 61839 75335 77633 78838 50031 40844 51070 55422 52159 76431 61861 58599 101840 62266 77933 76181 74968 67905 64042 75697 74134 74839 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99206000 23708 1234 22248 44542 35850 35850 1 9606 Homo sapiens 0.10413112560513582 RVGLPPGK Unmodified 822.50757 0.50757178 3905 Q14978-3;B2RAU8;A0A0A0MRM9;Q14978;Q14978-2;S4R3C2 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 0 0 1 4.33 0.471 2 1 37.603 37.671 3 0.0038097 8560 20230619_1883_Aki_TMTPro18x_K_F4 96.492 81.052 260640 183000 234920 243260 250460 282070 260600 258340 341210 291400 320480 311850 353250 277350 280780 306940 377460 326690 240600 168140 241060 241190 259450 281700 264670 266440 342090 293500 331060 314510 355980 288930 292230 309030 359860 310270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 348330000 23709 3905 22249 44543;44544;44545 35851;35852 35851 2 9606 Homo sapiens 0.0892182968814268 RVGLSGAPADACSTAQK Unmodified 1687.8312 0.83116712 3998 Q53GF0;Q8NFW8 CMAS N-acylneuraminate cytidylyltransferase yes no 0 0 1 8 0 1 39.125 39.111 3 3.6382E-09 9090 20230619_1888_Aki_TMTPro18x_K_F8 129.11 100.48 31513 20691 28304 32336 40603 38795 39927 37293 41180 31787 36445 38728 36649 30588 45067 38038 39660 34806 29079 19052 29226 31764 41136 38703 40316 38064 41666 32643 37667 38733 37791 32204 45339 37952 37965 33111 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26487000 23710 3998 22250 44546 35853 35853 1 9606 Homo sapiens 0.014764780925588639 RVIGDNPWTPEQLEQCK Unmodified 2069 2.33601E-05 1731 A0A804HJA4;J3KN16;Q5VYK3;R4GMY1;B3KV72 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 1 6.5 0.5 1 1 52.922 52.995 3 1.2411E-09 15195 20230619_1886_Aki_TMTPro18x_K_F6 140.02 124.6 58321 53482 63051 57620 64196 75928 71220 63186 71376 76655 69511 68643 81140 58658 61879 88709 78215 81619 54004 48986 63652 58118 66788 75106 71403 65794 72697 76504 71897 69737 81474 62474 64313 88174 74701 77585 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 80648000 23711 1731 22251 44547;44548 35854;35855 35854 2 9606 Homo sapiens 0.00828334935431485 RVIISAPSADAPMFVMGVNHEK 2 Oxidation (M) 2400.193 0.19298586 3382 V9HVZ4;P04406;P04406-2;E7EUT5;Q0QET7;A4UCT1;B4DRV9 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 2 1 3 2.61 2 1 1 1 48.539 48.581 4;5 2.4632E-12 13761 20230619_1880_Aki_TMTPro18x_K_F1 128.88 113.12 177020 136810 149470 179410 174250 164030 194190 189960 177530 163630 189960 174760 170730 158870 158300 187210 173090 182150 163420 125630 154660 177470 179330 167680 194120 191620 182220 167090 193390 176510 174360 165830 162180 187320 165530 173020 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2396600000 23712 3382 22252 44549;44550;44551;44552;44553 35856;35857;35858;35859 35857 1989;1990 4 9606 Homo sapiens 0.048897089402544225 RVIISAPSADAPMFVMGVNHEK Oxidation (M) 2384.1981 0.19807124 3382 V9HVZ4;P04406;P04406-2;E7EUT5;Q0QET7;A4UCT1;B4DRV9 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 1 1 1.8 0.748 2 2 1 51.324 51.357 4 3.2964E-30 14986 20230619_1881_Aki_TMTPro18x_K_F2 196.2 176.22 758540 613110 690670 753020 720460 667410 745400 780000 797290 714730 835920 784550 774660 637290 694880 789940 734230 807330 700830 562520 707860 748050 745780 684370 752060 787460 810480 727790 852750 788720 788570 670390 710760 792080 702630 766360 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 12290000000 23713 3382 22252 44554;44555;44556;44557;44558 35860;35861;35862;35863 35861 1989;1990 4 9606 Homo sapiens 0.061340128029314656 RVIISAPSADAPMFVMGVNHEK Unmodified 2368.2032 0.20315662 3382 V9HVZ4;P04406;P04406-2;E7EUT5;Q0QET7;A4UCT1;B4DRV9 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 1 2.5 0.5 1 1 54.709 54.744 4 9.264500000000001E-56 16448 20230619_1881_Aki_TMTPro18x_K_F2 277.91 235.64 590170 431120 495430 527560 411510 483550 547590 567160 567120 614070 571460 577360 618420 552050 489700 601480 594070 632360 544620 395680 510130 524460 438120 494190 545040 574860 577150 616770 588120 586810 623800 572920 506620 605080 567660 600150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 16621000000 23714 3382 22252 44559;44560 35864;35865 35864 2 9606 Homo sapiens 0.07378316665517559 RVINQEELR Unmodified 1155.636 0.63601977 4384 Q96NB3 ZNF830 Zinc finger protein 830 yes yes 0 0 1 4.5 0.5 1 1 33.797 33.866 3 0.017025 7135 20230619_1885_Aki_TMTPro18x_K_F5 66.92 28.116 112530 79579 102500 115030 115270 132570 115630 125980 179470 126390 135670 136390 153890 115290 112410 134590 167300 136300 103890 73180 105230 113430 118920 132510 118520 129140 177320 128140 141980 137300 154480 120710 118160 134980 159330 129550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97395000 23715 4384 22253 44561;44562 35866 35866 1 9606 Homo sapiens 0.0644272014053513 RVLATEDR Unmodified 958.51959 0.51959303 695 A0A024RBV5;P51151 RAB9A Ras-related protein Rab-9A yes no 0 0 1 4 0 1 29.007 29.077 3 0.04051 5240 20230619_1883_Aki_TMTPro18x_K_F4 55.549 24.476 30370 27142 28857 31544 41955 42845 36311 39567 53729 32559 39943 39257 39800 35007 38976 31622 46532 42381 28087 24880 29649 31644 42400 42401 37464 40444 53129 33532 41617 39406 40607 36081 40020 32462 44420 40155 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4862200 23716 695 22254 44563 35867;35868 35867 2 9606 Homo sapiens 0.03867401640661683 RVLDETAR Unmodified 958.51959 0.51959303 1473 Q03252;A0A384NPH0 LMNB2 Lamin-B2 yes no 0 0 1 3.5 0.5 1 1 30.883 30.958 3 0.00060209 5900 20230619_1883_Aki_TMTPro18x_K_F4 123.21 65.649 110820 75887 104000 109820 114700 108250 122570 133450 145760 115990 150560 143580 134760 120620 128310 109540 156990 134610 102320 69796 106390 108100 118400 110170 123880 134110 147210 119000 153500 143730 137790 124580 132050 111740 149780 127670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154230000 23717 1473 22255 44564;44565 35869;35870 35870 2 9606 Homo sapiens 0.03867401640661683 RVLDSEGQLR Unmodified 1171.6309 0.63093439 4756 Q9Y6C2 EMILIN1 EMILIN-1 yes yes 0 0 1 5 0 1 35.708 35.798 3 0.0039584 7823 20230619_1885_Aki_TMTPro18x_K_F5 63.473 30.714 44068 35094 45594 50677 56627 63506 55167 59403 89786 57884 78768 82768 76835 67178 75601 58933 86082 82708 40753 32256 46389 50042 57977 63126 56764 60921 88929 59408 81267 82337 78444 69384 77377 60748 82238 78317 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130390000 23718 4756 22256 44566 35871 35871 1 9606 Homo sapiens 0.05198416277949036 RVLEEGSVEAR Unmodified 1243.6521 0.65206377 465 Q96CT7;A0A024R7M8 CCDC124;LOC115098 Coiled-coil domain-containing protein 124 yes no 0 0 1 2.5 0.5 1 1 34.706 34.762 3 7.8532E-05 7496 20230619_1882_Aki_TMTPro18x_K_F3 99.011 52.305 40208 25791 39816 37218 42340 40693 40285 43650 52434 45767 53741 53667 49295 40099 52414 49393 59238 49742 37126 23727 40489 36698 43697 40958 41135 44435 52754 46380 54887 53666 50595 42303 53599 49520 56547 47276 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20944000 23719 465 22257 44567;44568 35872;35873 35873 2 9606 Homo sapiens 0.03998381586825417 RVLGQLHGGPSSCSATGTNR Unmodified 2054.0076 0.007568354 2782 CON__P15636 yes yes 0 0 1 6.2 1.17 2 1 1 1 33.586 33.637 3;4 4.3391E-45 6918 20230619_1888_Aki_TMTPro18x_K_F8 258.9 247.95 + 43601 30132 48137 51254 74091 64705 53698 65294 49470 43256 54594 87037 55297 38310 49533 65273 61423 79522 40312 27770 48904 50172 74191 64426 55240 66056 50853 46164 56028 84644 56093 42566 51221 65894 58779 75313 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 830680000 23720 2782 22258 44569;44570;44571;44572;44573 35874;35875;35876;35877 35877 4 0.02272487255731903 RVLIAAHGNSLR Unmodified 1305.763 0.76295162 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8;B4DKL5;B4DMJ7;B7Z9E5;B4DJA4;P15259;A4D2J6 PGAM1;hCG_2015269;PGAM2 Phosphoglycerate mutase;Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 0 0 1 6.5 1.12 1 1 1 1 33.354 33.405 4 8.7211E-07 7014 20230619_1886_Aki_TMTPro18x_K_F6 146.5 123.07 40768 32670 35444 34927 42212 63999 35799 43953 65320 14354 18005 18365 14894 11532 21890 15750 23177 14802 37651 29936 36561 35464 43357 61998 37364 45458 62813 16330 20569 18258 15655 12343 22169 15728 22105 14100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115860000 23721 3475 22259 44574;44575;44576;44577 35878 35878 1 9606 Homo sapiens 0.12230066085544422 RVLLGETGK Unmodified 971.57638 0.57637963 3713 P62280;M0QZC5;M0R1H6 RPS11 40S ribosomal protein S11 yes no 0 0 1 2 0.816 1 1 1 41.073 41.117 3 5.2158E-05 10267 20230619_1881_Aki_TMTPro18x_K_F2 145.99 106.99 1023800 750930 835470 911290 1000700 1061200 1005900 1045200 1313400 1083900 1106400 1126500 1260200 1124900 825170 1699800 1573000 1349700 944650 689150 867240 909170 1027100 1061500 1023300 1069600 1312000 1095300 1151100 1143100 1262100 1190000 892790 1676600 1496300 1286500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2184800000 23722 3713 22260 44578;44579;44580 35879;35880;35881 35880 3 9606 Homo sapiens 0.08945449197187827 RVLLQASQDENFGNTTPR Unmodified 2045.029 0.029015303 3671 P57740;G3V1T4 NUP107 Nuclear pore complex protein Nup107 yes no 0 0 1 7.5 0.5 1 1 45.254 45.282 3 6.5188E-72 11585 20230619_1888_Aki_TMTPro18x_K_F8 330.65 320.73 36086 33057 32413 32047 35016 42721 32010 34728 36617 40061 42480 34782 47131 42966 39525 48654 41918 40022 33364 30252 33268 32606 36134 42217 32617 36154 37305 40056 43455 35877 47608 44332 40508 48298 40070 38111 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150840000 23723 3671 22261 44581;44582 35882;35883 35883 2 9606 Homo sapiens 0.04830195556064609 RVLPPNWK Unmodified 1008.5869 0.58688473 3712 P62277 RPS13 40S ribosomal protein S13 yes yes 0 0 1 5.67 0.471 1 2 45.057 45.142 3 0.00029231 11578 20230619_1886_Aki_TMTPro18x_K_F6 153.71 119.84 840520 721620 813100 770470 824920 970080 893860 908140 1032000 955250 923370 854340 946170 767380 810850 971510 950380 931640 777240 661050 828260 777170 858430 964480 901670 932970 1039300 960000 952910 869250 958420 805500 835490 970310 907830 885370 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1762699999.9999998 23724 3712 22262 44583;44584;44585 35884;35885;35886 35885 3 9606 Homo sapiens 0.0829347664226816 RVLQALEGLK Unmodified 1125.687 0.68699271 2186 B0ZBD0;Q8WVX7;P39019;A0A075B6E2 RPS19 40S ribosomal protein S19 yes no 0 0 1 3.5 0.5 1 1 56.299 56.321 3 1.8508E-11 16771 20230619_1883_Aki_TMTPro18x_K_F4 169.21 100.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23725 2186 22263 44586;44587 35887;35888 35888 2 9606 Homo sapiens 0.12917669185412706 RVLQQFADNDVSR Unmodified 1546.7852 0.7852032 1097 P51659;A0A0S2Z4J1;B2R659;E7EPL9;A0A804HK65;A0A2R8YD50;P51659-2;P51659-3;B4DSD0;B4DDM5;A0A804HKU2;A0A2R8Y7L2;B4DI68;E7ET17;B3KSP2;A0A804HIR1;Q59H27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 0 0 1 8 0 1 44.022 44.041 2 0.071493 11102 20230619_1888_Aki_TMTPro18x_K_F8 60.518 35.302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23726 1097 22264 44588 35889 35889 1 9606 Homo sapiens 0.033682009726362594 RVLVDVER Unmodified 984.57163 0.5716286 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-4;B3KPV0 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 1 5.5 0.5 1 1 37.315 37.395 3 0.005949 8438 20230619_1885_Aki_TMTPro18x_K_F5 96.331 62.078 261710 193260 224120 234500 264300 296600 255720 257580 334180 260020 280810 286570 294520 243200 264270 293920 308130 292120 241560 177350 231450 234240 271400 294310 260730 265880 333690 263640 291230 288290 298730 254990 271830 294380 294280 277540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 277380000 23727 33 22265 44589;44590 35890;35891 35890 2 9606 Homo sapiens 0.07872565054424285 RVLVTGAGK Unmodified 899.55525 0.55525025 1484 A0A384NY14;Q7Z4W1;J3KS22;J3QS36;J3KRZ4 DCXR L-xylulose reductase yes no 0 0 1 5 0 1 37.32 37.412 3 0.00024924 8441 20230619_1885_Aki_TMTPro18x_K_F5 124.33 92.381 96670 72708 84178 88271 98043 81601 98872 105160 126200 88472 131620 106580 97846 93069 137740 86883 143040 104280 89247 66719 86749 87824 100620 83637 100500 105350 127000 90899 133200 107010 102900 96091 139350 88563 136540 99005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107180000 23728 1484 22266 44591 35892 35892 1 9606 Homo sapiens 0.10145483888334184 RVLVWDLR Unmodified 1055.624 0.62399852 1173 J3QT28;A0A140VJF3;O43684-2;O43684;B4DDM6 BUB3 Mitotic checkpoint protein BUB3 yes no 0 0 1 5 0 1 50.533 50.609 3 0.0027983 14007 20230619_1885_Aki_TMTPro18x_K_F5 93.467 53.423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23729 1173 22267 44592 35893 35893 1 9606 Homo sapiens 0.0984114818800208 RVLVYGGR Unmodified 918.53993 0.53993454 1243 A0A140VKA9;P09417;P09417-2;B7Z415;D6RGG7;D6RHJ7 QDPR Dihydropteridine reductase yes no 0 0 1 6 0.816 1 1 1 35.092 35.164 3 0.0056339 7691 20230619_1886_Aki_TMTPro18x_K_F6 91.516 67.659 108330 115480 104190 129440 126000 118180 117420 126400 124650 63236 72205 46279 56441 44022 91393 79903 77378 38355 100320 105760 106630 129440 128760 120630 119120 126900 124290 66859 75767 47894 59764 47344 91472 77440 73900 37013 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106160000 23730 1243 22268 44593;44594;44595 35894 35894 1 9606 Homo sapiens 0.07740617091133117 RVLYVGGLAEEVDDK Unmodified 1661.8625 0.86245047 2159 E9PEQ6;A8KAM9;Q9UNP9-2;Q9UNP9;Q9UNP9-3;E9PK21 PPIE Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase E yes no 0 0 1 4 0 1 53.6 53.62 3 9.8665E-05 15636 20230619_1883_Aki_TMTPro18x_K_F4 103.66 88.684 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23731 2159 22269 44596 35895 35895 1 9606 Homo sapiens 0.05799374398316104 RVMGLVPAK Unmodified 969.57936 0.57935651 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 1 5.5 0.5 1 1 44.789 44.873 3 0.0014036 11642 20230619_1886_Aki_TMTPro18x_K_F6 95.502 71.472 881270 618780 661380 687730 525020 766710 638940 669900 920400 282010 298900 241170 264860 222680 390510 358590 345320 190600 812480 567500 688360 690110 561840 766670 646160 680810 894610 305890 334260 246890 277690 237250 392170 348930 329760 183380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 437850000 23732 3606 22270 44597;44598 35896;35897 35897 2 9606 Homo sapiens 0.09335001050339997 RVMIPVPAGVEDGQTVR Unmodified 1822.9724 0.97235205 2347 B3KM81;Q59E88;Q53G26;Q96EY1-2;Q96EY1;Q96EY1-3 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial yes no 0 0 1 8 0 1 48.959 49.025 3 1.1695999999999999E-23 13109 20230619_1888_Aki_TMTPro18x_K_F8 204.78 179.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23733 2347 22271 44599 35898 35898 1 9606 Homo sapiens 0.0937847646582668 RVNAIEEVNNNVK Unmodified 1497.79 0.78995423 2178 B0QYR6;B3KTE2;Q9UJY5-4;Q9UJY5-3;Q9UJY5-2;Q9UJY5;Q9UJY5-6 GGA1 ADP-ribosylation factor-binding protein GGA1 yes no 0 0 1 7 0 1 41.823 41.894 3 1.1723E-11 10039 20230619_1887_Aki_TMTPro18x_K_F7 191.53 153.44 30738 21428 25209 31147 31475 32719 32938 32905 34584 34673 39785 36971 35833 30645 32709 39767 42003 37343 28354 19708 26197 30661 32231 32966 33177 33653 35342 35010 40380 37235 36557 32296 33867 39661 40066 35511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35791000 23734 2178 22272 44600 35899 35899 1 9606 Homo sapiens 0.060970851154024786 RVNAIEHVIIPR Unmodified 1415.8361 0.83611656 384 Q9H3H0;A0A024R683;Q9Y5K8;G3V2S6;Q8N5Z9;G3V2V6;Q6PJ05;H0YJH8 VATD;ATP6V1D V-type proton ATPase subunit D yes no 0 0 1 3 0 1 42.428 42.493 4 0.0014402 10726 20230619_1882_Aki_TMTPro18x_K_F3 74.76 56.951 27246 20500 24315 27478 27800 32865 31250 31080 41668 35247 38908 45983 45933 35166 33482 39810 41238 45454 25158 18831 25021 27239 28733 32772 31622 31988 41733 35735 40387 45799 46042 36895 34728 40229 39411 43097 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48376000 23735 384 22273 44601 35900 35900 1 9606 Homo sapiens 0.14483194808167354 RVNEVIVGNDQLMEI Unmodified 1727.8876 0.88761936 4583 Q9NR50;Q9HA31 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes no 0 0 1 4 0 1 59.882 59.884 2 0.0026528 18292 20230619_1883_Aki_TMTPro18x_K_F4 87.184 70.931 46697 36530 42336 55972 35962 45038 45728 49179 50420 55977 62816 54822 62557 58859 49642 68204 64573 79593 43134 33602 43361 54747 38174 46435 45716 50152 51601 56167 63783 55901 63286 61078 51640 68963 61743 75422 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 90248000 23736 4583 22274 44602 35901;35902 35902 2 9606 Homo sapiens 0.052791059292985665 RVNILSDMHLR Unmodified 1352.7347 0.73468796 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;P51114-3;B4DM21;B4DM78;B4DGH9;E7EU85;C9JY20;C9JZE0 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 1 4 0 1 45.273 45.317 4 0.00021746 11864 20230619_1883_Aki_TMTPro18x_K_F4 114.86 100.6 84869 148890 301220 86270 256100 451220 306780 69492 394380 107650 341900 60767 239630 1092900 47454 65448 393190 318790 80692 135600 286320 97268 271800 419570 308550 98819 393080 107990 346490 99636 245060 1035500 70743 97115 372340 300370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60238000 23737 1029 22275 44603 35903 35903 1 9606 Homo sapiens 0.07243000113953713 RVNLAIWDTAGQER Unmodified 1627.8431 0.84305243 658 Q9UL25;A0A024RBA9;Q96GX3 RAB21 Ras-related protein Rab-21 yes no 0 0 1 1 0 1 50.017 50.017 3 0.0010512 14378 20230619_1880_Aki_TMTPro18x_K_F1 82.529 61.723 30971 29629 31035 33420 33827 37097 39678 25331 37452 38114 35460 30790 45153 31398 31467 49137 42611 45770 28669 27146 31583 33483 35053 36980 39562 27081 38227 37636 36859 31651 45090 33344 32953 48842 40684 43497 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140960000 23738 658 22276 44604 35904 35904 1 9606 Homo sapiens 0.05424462898076854 RVNLSEAR Unmodified 943.51993 0.51992738 1201 A0A140VJS2;Q99811;Q5ISC7 PRRX2 Paired mesoderm homeobox protein 2 yes no 0 0 1 7 0.816 1 1 1 30.355 30.406 3 0.0021684 5807 20230619_1888_Aki_TMTPro18x_K_F8 96.624 56.272 72753 68271 64686 60950 95574 126970 87617 83461 156530 25360 25430 27582 23643 26456 34339 24032 30987 17857 67273 62433 66858 63043 96951 122350 90772 86684 149900 29139 32200 27899 24810 27155 34481 23890 29589 17074 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 24358000 23739 1201 22277 44605;44606;44607 35905;35906 35906 2 9606 Homo sapiens 0.045908213605116543 RVNPPTLR Unmodified 951.5614 0.56139826 1616 Q27J81;Q27J81-2;A0A6Q8PHA2;A0A6Q8PH71;A0A6Q8PHG2;A0A6Q8PGN3;A0A6Q8PF44;A0A6Q8PH25;A0A6Q8PF29;A0A087X118;A0A6Q8PGC7;A0A0A0MQU1;A0A6Q8PH63;A0A6Q8PGU8;A0A6Q8PH59;A0A6Q8PFN5;A0A6Q8PFB9;A0A6Q8PGY8;A0A6Q8PH52;A0A6Q8PGK9 INF2 Inverted formin-2 yes no 0 0 1 4.5 0.5 1 1 33.649 33.718 3 0.0084087 6973 20230619_1883_Aki_TMTPro18x_K_F4 83.948 59.172 120690 78692 126370 124530 144510 149270 123680 140520 154920 125640 169960 163000 157590 142530 141460 121080 184590 161400 111500 72472 128130 122270 148070 148820 126980 143720 156520 128960 173060 163090 160550 146560 146380 124370 176040 152960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32254000 23740 1616 22278 44608;44609 35907;35908 35907 2 9606 Homo sapiens 0.08368002119846096 RVNSASSSNPPAEVDPDTILK Unmodified 2196.1022 0.10223983 4336 Q96DI9;Q9BY77;F6VRR5;B4E0L0;Q9BY77-2 POLDIP3 Polymerase delta-interacting protein 3 yes no 0 0 1 5.5 0.5 1 1 48.566 48.644 3 1.8035999999999998E-22 13155 20230619_1885_Aki_TMTPro18x_K_F5 171.83 140.03 68897 60581 67437 71726 73435 87322 75211 70949 89978 84471 88806 89477 85712 82127 92720 100610 109890 106740 63726 55545 68749 71717 75922 86736 76186 73989 90777 84835 91063 90381 88000 85904 95150 101120 104950 101330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 152910000 23741 4336 22279 44610;44611 35909;35910;35911 35909 3 9606 Homo sapiens 0.05203279488023327 RVPAHGHPVIER Unmodified 1366.7582 0.75820059 4579 Q9NQZ2 UTP3 Something about silencing protein 10 yes yes 0 0 1 8 0 1 23.194 23.236 3 0.09151 3832 20230619_1888_Aki_TMTPro18x_K_F8 34 23.171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23742 4579 22280 44612 35912 35912 1 9606 Homo sapiens 0.0894918194278489 RVPCAYDK Unmodified 1007.4859 0.48585006 3590 P46109 CRKL Crk-like protein yes yes 0 0 1 8 0 1 36.74 36.727 3 0.0030728 8163 20230619_1888_Aki_TMTPro18x_K_F8 101.9 71.326 224610 181570 211900 190200 238870 265170 226340 226510 301060 105950 120190 86636 82916 79070 167510 98462 150940 75950 207580 166340 216570 192480 245820 261600 231150 230810 294590 113360 130120 88808 89994 82780 167520 97615 144060 72651 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86143000 23743 3590 22281 44613 35913 35913 1 9606 Homo sapiens -0.017593431227510337 RVPDHHPC Unmodified 1016.461 0.46103229 3756 V9HW96;P78371;P78371-2;B7Z4R3;Q9H369 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 1 4 0 2 22.978 23.044 3 0.00047394 3742 20230619_1883_Aki_TMTPro18x_K_F4 113.5 108.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23744 3756 22282 44614;44615 35914;35915 35914 2 9606 Homo sapiens -0.04653978205465137 RVPFSLLR Unmodified 986.60253 0.6025348 3383 V9HW43;P04792;A0A6Q8PFK8;A0A6Q8PGK1;A0A6Q8PHJ6;B4DL87;A0A6Q8PFE7;A0A6Q8PF43;A0A6Q8PHA6;A0A6Q8PH65;A0A6Q8PGY2;A0A8E9ZT92;A0A8E9ZUD7 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 0 0 1 8 0 1 48.275 48.341 3 0.012628 12811 20230619_1888_Aki_TMTPro18x_K_F8 71.692 6.4457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23745 3383 22283 44616 35916 35916 1 9606 Homo sapiens 0.10869763159337253 RVPGQGSSEDDLQEEEQIEQAIK Unmodified 2584.2253 0.22526809 3446 P13521;B4DQJ6 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 1 2 0 1 54.477 54.501 3 1.2478E-26 16397 20230619_1881_Aki_TMTPro18x_K_F2 190.37 178.91 49748 43638 53758 78837 21892 27171 65939 70611 76175 66838 78232 71196 67953 66246 66739 71115 72067 74810 46052 40213 53969 76004 26449 32337 64263 69088 76993 67852 79671 71950 69679 68721 68207 71589 68920 71005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236030000 23746 3446 22284 44617 35917 35917 1 9606 Homo sapiens -0.003475536419045966 RVPIPVDR Unmodified 950.56615 0.56614929 1181 Q53T76;A8K1Z2;A0A140VJK2;P43304;B7Z601;P43304-2 GPD2 Glycerol-3-phosphate dehydrogenase;Glycerol-3-phosphate dehydrogenase, mitochondrial yes no 0 0 1 1 0 1 37.374 37.374 3 0.0068567 8919 20230619_1880_Aki_TMTPro18x_K_F1 88.181 52.885 43649 32460 43099 44515 65085 67096 61501 60259 74512 63144 58816 61492 72001 54318 59193 74319 64288 66429 40334 29826 44170 44247 65745 65973 62583 62081 74558 63641 61672 62272 72420 57348 60782 73876 61475 63170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32126000 23747 1181 22285 44618 35918 35918 1 9606 Homo sapiens 0.08888886262604956 RVPPPALSR Unmodified 991.5927 0.59269839 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 3.75 0.829 2 1 1 32.716 32.786 3 0.0002934 6588 20230619_1883_Aki_TMTPro18x_K_F4 107.79 102.82 133440 113120 117930 141970 155030 164680 146350 153200 192950 132310 135970 109830 132550 109920 140470 148740 158990 109430 123300 103790 121790 141260 157930 164550 149450 156710 191490 134290 141880 112700 135810 115410 143750 146640 151590 104530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106320000 23748 3152 22286 44619;44620;44621;44622 35919;35920;35921 35920 3 9606 Homo sapiens 0.09656575153940139 RVPQCPSGR Unmodified 1055.5294 0.52944621 3948 Q16186;B4DMP7;Q68E00 ADRM1;DKFZp686G2045 Proteasomal ubiquitin receptor ADRM1 yes no 0 0 1 4.5 3.5 1 1 27.258 27.273 3 0.0030622 4933 20230619_1880_Aki_TMTPro18x_K_F1 88.364 68.577 31458 19870 33212 35651 48085 52057 37881 49985 49451 33169 42836 43705 40625 34324 36088 28607 48700 40241 29060 18334 33826 34894 48503 51312 39169 50709 49408 34760 44162 43564 41329 35425 37424 29522 46415 38129 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30713000 23749 3948 22287 44623;44624 35922;35923 35922 2 9606 Homo sapiens 0.0039026637439292244 RVPQNWFPIFNPER Unmodified 1798.9267 0.92672248 4413 Q9BQP7;Q5QPE7 MGME1 Mitochondrial genome maintenance exonuclease 1 yes no 0 0 1 6 0 1 59.948 60.009 3 4.7016E-22 18127 20230619_1886_Aki_TMTPro18x_K_F6 223.58 205.21 35621 32881 35060 33122 33556 41792 40627 37667 41995 38883 35475 34903 39789 36426 41870 42077 44340 37489 32959 30099 35637 33568 35195 41512 40590 38797 42451 39126 36907 35675 40596 37809 42673 41942 42353 35681 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38623000 23750 4413 22288 44625 35924 35924 1 9606 Homo sapiens 0.059216190658162304 RVPSNASWEQAMK Oxidation (M) 1518.7249 0.72491113 1683 A0A8Q3SIG7;A0A8V8TM87;A0A8V8TM61;F5H578;A0A7N4I394;O75400-2;O75400;O75400-3;Q05C41;B4DPY2 PRPF40A Pre-mRNA-processing factor 40 homolog A yes no 0 1 1 8 0 1 40.543 40.535 3 0.00072535 9720 20230619_1888_Aki_TMTPro18x_K_F8 114.02 95.186 17047 14442 18950 18631 23400 23902 21240 21131 23475 18717 20134 18228 21418 18687 19454 20120 21059 19171 15781 13255 19154 18539 23876 23708 21611 21711 23648 19045 20859 18555 21731 19335 19908 20144 20120 18225 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12642000 23751 1683 22289 44626 35925 35925 1102 1 9606 Homo sapiens -0.01370232682097594 RVPTAPAATSK Unmodified 1097.6193 0.61930707 2911 E9PC90;H1UBN2;P14635-2;P14635;D6RHI0 CCNB1;CCNB1V G2/mitotic-specific cyclin-B1 yes no 0 0 1 3 0 1 35.473 35.53 3 0.0027002 7789 20230619_1882_Aki_TMTPro18x_K_F3 77.913 47.928 51602 28631 51820 58112 55768 75319 56945 54244 82437 61869 67460 61222 69944 62040 49388 52660 73370 56348 47620 26485 52736 56407 57802 74283 58120 57085 81876 62185 69946 62197 70372 63471 51913 53285 69850 53543 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30069000 23752 2911 22290 44627 35926 35926 1 9606 Homo sapiens 0.07440219254613112 RVPTGLPFIK Unmodified 1126.6863 0.68626443 295 B3KS61;A0A024R4F6;O60725 ICMT Protein-S-isoprenylcysteine O-methyltransferase yes no 0 0 1 7 0 1 52.91 52.98 3 0.0068599 14906 20230619_1887_Aki_TMTPro18x_K_F7 72.652 2.6987 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23753 295 22291 44628 35927 35927 1 9606 Homo sapiens 0.12798874536360927 RVPVLGK Unmodified 767.50176 0.50175812 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB3;Q9H8E3;Q9P2J5-3;Q9HAM7;Q9NPU8;B3KXA9 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 0 1 5.5 0.5 1 1 41.498 41.583 3 0.029079 10279 20230619_1886_Aki_TMTPro18x_K_F6 60.76 47.088 159690 125040 141110 145670 161760 164720 173730 147500 188490 161950 176380 168800 175380 147300 167290 195570 190160 155410 147480 114670 145220 145690 166640 164790 174860 152350 190620 163190 181460 170430 178660 155140 171660 193440 181480 148170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 213650000 23754 1603 22292 44629;44630 35928;35929 35929 2 9606 Homo sapiens 0.10870731176476056 RVQDELAR Unmodified 985.53049 0.53049207 491 A0A024R843;Q13049 TRIM32 E3 ubiquitin-protein ligase TRIM32 yes no 0 0 1 4 0 1 31.651 31.712 3 0.0019974 6210 20230619_1883_Aki_TMTPro18x_K_F4 91.265 34.831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23755 491 22293 44631 35930 35930 1 9606 Homo sapiens 0.03714804014953188 RVQDLEQK Unmodified 1014.5458 0.54580778 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2YQI1;A0A7I2V4R2;B7ZA24;P40763-3;P40763-2;A0A7I2YQD2;A0A7I2V4R3;A0A7I2V395;A0A7I2V2G1;A0A7I2V4F6;A0A7I2V2T1 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 0 1 5.5 0.5 1 1 37.529 37.613 3 0.024564 8580 20230619_1885_Aki_TMTPro18x_K_F5 78.264 33.497 201930 133010 218700 233320 311930 341600 266320 282520 315410 245670 319450 333790 300910 256980 274170 220890 351460 317180 186620 122660 222260 228580 315390 335660 272710 291640 318450 253060 326820 332100 306490 265790 283200 228160 335290 300360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105040000 23756 1660 22294 44632;44633 35931 35931 1 9606 Homo sapiens 0.03911670812135526 RVQDLSAGGQGSLTDSGPER Unmodified 2028.9825 0.98245904 3569 P40222 TXLNA Alpha-taxilin yes yes 0 0 1 5 0 1 40.061 40.151 3 0.09103 9582 20230619_1885_Aki_TMTPro18x_K_F5 27.961 21.381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23757 3569 22295 44634 35932 35932 1 9606 Homo sapiens 0.009127109341307005 RVQFGVLSPDELK Unmodified 1486.8144 0.81437807 1633 A0A6Q8PGB0;P24928;P24928-2 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 1 1.5 0.5 1 1 54.732 54.744 3 5.1758E-06 16298 20230619_1880_Aki_TMTPro18x_K_F1 128.22 72.962 81686 73847 76291 86660 73520 87087 84552 88963 94512 94726 86748 82726 94963 75101 86013 103080 91718 87761 75541 67695 77976 86481 76946 88072 84944 90898 95454 95050 89706 84306 96203 79216 88030 102230 87672 83532 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280030000 23758 1633 22296 44635;44636 35933 35933 1 9606 Homo sapiens 0.09044345268966936 RVQGLEGPR Unmodified 1010.5621 0.56212655 2830 D3DVC4;P48681;Q2YDX4;Q9H6U9 NES Nestin yes no 0 0 1 7 0.816 1 1 1 31.609 31.655 3 0.00023101 6189 20230619_1888_Aki_TMTPro18x_K_F8 126.31 81.176 161790 323790 154380 118090 229010 212530 239230 262380 338980 148310 152060 133750 137090 108420 166260 169390 180200 112620 150900 294310 158350 138240 232090 209580 243470 261260 331590 155840 164070 135830 141860 115850 169310 166080 171810 107820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 307630000 23759 2830 22297 44637;44638;44639 35934;35935 35935 2 9606 Homo sapiens 0.05726796768908571 RVQGLEGPRK Unmodified 1138.6571 0.65708956 2830 D3DVC4;P48681;Q2YDX4;Q9H6U9 NES Nestin yes no 0 0 2 3.5 0.5 1 1 33.291 33.353 4 0.0030267 6909 20230619_1882_Aki_TMTPro18x_K_F3 87.789 62.935 166710 157190 162840 125130 250240 208610 242220 260590 300600 104480 104980 69900 101270 67715 145120 119580 126750 68715 154270 143630 166790 130430 252320 206060 246290 258200 294520 113190 116630 72805 105530 72700 145620 116580 121050 66018 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78624000 23760 2830 22298 44640;44641 35936;35937 35936 2 9606 Homo sapiens 0.09330730240071716 RVQLAEDLK Unmodified 1070.6084 0.60840804 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YFD1;Q6PEK6;H7C141 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 1 6.5 0.5 1 1 43.729 43.815 3 0.00051653 10842 20230619_1887_Aki_TMTPro18x_K_F7 97.284 55.488 129140 96762 105020 139050 139500 157980 165250 158040 196880 142480 165550 184770 163710 141080 152270 175290 185000 195930 119170 88954 109460 137110 142980 158240 165980 161080 197310 146200 171380 184170 166670 148770 156970 176680 176770 185840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121400000 23761 2865 22299 44642;44643 35938 35938 1 9606 Homo sapiens 0.07592816880310238 RVQTPLLR Unmodified 981.60835 0.60834846 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q1WWK5;B4DTL7;K7ENL0;K7EPY1;K7EJV0 SEPT9 Septin-9 yes no 0 0 1 5.5 1.12 1 1 1 1 36.884 36.951 3 0.001903 8301 20230619_1886_Aki_TMTPro18x_K_F6 112.41 73.158 234700 178540 218760 217460 232180 246300 267540 270430 305100 290900 301340 299600 310660 264030 292770 293600 316000 294760 216800 163830 223750 216880 241030 247450 268870 275080 308530 293140 309770 302520 315920 275090 299300 294680 301980 280030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 591140000 23762 541 22300 44644;44645;44646;44647 35939;35940;35941 35940 3 9606 Homo sapiens 0.1168086167100455 RVQVDVK Unmodified 842.4974 0.49740102 2263 B2R8R5;Q13263;Q13263-2;M0R3C0 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 1 7.5 0.5 1 1 36.925 36.951 3 0.017452 8235 20230619_1888_Aki_TMTPro18x_K_F8 84.743 30.132 359240 158950 340590 392790 499200 655930 493220 515140 652850 429900 578010 668250 613620 554200 539260 279740 755100 656680 331080 147770 350450 380220 506940 639200 502360 533540 652180 446830 598650 662830 622030 561220 559990 307570 719700 620080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 359890000 23763 2263 22301 44648;44649 35942 35942 1 9606 Homo sapiens 0.06985221962906962 RVQVSQEQWVK Unmodified 1385.7415 0.74154747 2992 F8W8C1;Q6ZTA4;Q6ZTA4-2 TRIM67 Tripartite motif-containing protein 67 yes no 0 0 1 1.5 0.5 1 1 43.382 43.422 3 0.0028158 11636 20230619_1880_Aki_TMTPro18x_K_F1 76.942 39.22 85597 64839 91254 85973 86432 107800 106350 104470 133200 104820 118480 131020 123490 114530 107150 111220 182190 138540 79156 59551 92153 85384 90808 107220 106890 106970 133470 106780 122540 131200 125260 118490 113380 113350 173290 131460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235050000 23764 2992 22302 44650;44651 35943 35943 1 9606 Homo sapiens 0.06410636266173242 RVREEEIEVDSR Unmodified 1515.7641 0.76413341 3905 Q14978-3;B2RAU8;A0A0A0MRM9;Q14978;Q14978-2;Q96J17 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 0 0 2 1 0 1 32.084 32.084 4 1.5735E-09 6833 20230619_1880_Aki_TMTPro18x_K_F1 176.25 137.25 19375 12988 18386 21336 18671 17882 17126 20660 22892 21728 23236 19816 22939 18378 21516 27142 21920 20992 17888 11966 18774 20805 19322 18405 17552 20939 23009 21842 23785 20183 23345 19465 21958 26774 20962 20007 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22697000 23765 3905 22303 44652 35944 35944 1 9606 Homo sapiens 0.026881908731184012 RVSDIQWFR Unmodified 1205.6305 0.63054046 3920 Q6FGV9;Q15126 PMVK Phosphomevalonate kinase yes no 0 0 1 4 0 1 48.944 48.982 3 0.00026598 13511 20230619_1883_Aki_TMTPro18x_K_F4 109.66 80.937 116180 97143 112430 126320 108740 123560 130020 120980 139800 138670 136450 141360 144500 124360 157000 144790 144320 147310 107410 89168 114560 125120 113840 125090 130160 124300 141760 139280 140600 142780 147810 129920 158660 145360 138230 139880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113840000 23766 3920 22304 44653 35945 35945 1 9606 Homo sapiens 0.03595041348717132 RVSHQGYSTEAEFEEPR Unmodified 2020.9239 0.92388153 2239 B2R6S9;P30533 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes no 0 0 1 3 0 1 34.928 34.989 3 3.166E-09 7587 20230619_1882_Aki_TMTPro18x_K_F3 109.38 99.459 5194.3 2348.4 3305 4596.8 5725.2 6209.5 5916.2 3324.1 5732.2 5051.5 7394.9 6210.6 5035.9 4677 5250.8 6107 5786.4 6771.4 4775.1 2173.9 3559.7 4469.4 5762.6 6087.6 5939.9 3650.7 5908.4 5052.9 7397.6 6205.8 5226.7 4948.9 5370.7 6148.2 5538 6420.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4292100 23767 2239 22305 44654 35946 35946 1 9606 Homo sapiens -0.045743456402760785 RVSISEGDDK Unmodified 1104.5411 0.54111633 3487 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R299;M0R0P1;M0R2U2;M0R1H0;M0R2B0 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 0 1 3 0 1 36.433 36.488 3 0.0004801 8179 20230619_1882_Aki_TMTPro18x_K_F3 106.79 58.146 48345 23787 40295 52336 59922 69817 54674 62049 91065 56482 69524 121180 88299 89940 58820 80573 153700 190120 44530 22050 41978 50657 60672 69021 56528 63783 89750 59413 73469 118840 88360 93382 65685 87135 146390 179280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57932000 23768 3487 22306 44655 35947 35947 1 9606 Homo sapiens -0.0069725812129490805 RVSISEGDDKIEYR Unmodified 1665.8322 0.83221298 3487 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R299;M0R0P1;M0R2U2;M0R1H0;M0R2B0 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 0 2 5 0.816 1 1 1 41.463 41.537 4 0.00087798 10216 20230619_1883_Aki_TMTPro18x_K_F4 89.484 77.319 599980 500090 522940 574600 606290 576650 611720 666720 655530 699370 700310 671140 737220 565010 727280 736890 601200 625450 554260 458470 539070 574430 622740 585390 618060 675550 667560 703870 717970 679200 750090 595550 732850 731570 576610 595150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1524399999.9999998 23769 3487 22307 44656;44657;44658 35948;35949 35948 2 9606 Homo sapiens 0.025930157331231385 RVSLEPHQGPGTPESK Unmodified 1717.8747 0.87474649 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 6.5 0.5 1 1 35.858 35.924 4 0.0001264 7954 20230619_1886_Aki_TMTPro18x_K_F6 79.027 53.708 28542 22076 32034 35247 42244 41699 32042 33896 31708 35957 36015 35854 34793 30740 28667 36075 67987 42446 26410 20318 32412 34569 42744 41494 32912 35220 32537 36218 36689 36227 35317 32169 31454 36499 64493 40342 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95390000 23770 349;3906 22308 44659;44660 35950 35950 1 9606 Homo sapiens 0.0445241086133592 RVSPVGETYIHEGLK Unmodified 1683.8944 0.8944193 1001 A0A0C4DG84;A0A7P0TAR4;Q32Q26;J3KPY9;A4FUA5;A0A7P0Z4A8;P58335-3;P58335-2;P58335-4;P58335 ANTXR2 Anthrax toxin receptor 2 yes no 0 0 1 8 0 1 43.491 43.501 4 1.9668E-05 10927 20230619_1888_Aki_TMTPro18x_K_F8 109.83 93.293 38979 34749 40601 41567 39148 43358 42607 47210 51451 50314 50829 51104 50267 49638 58049 55380 63918 56842 36076 31862 41092 41456 40878 43800 43055 48030 51896 50707 52179 51801 51748 51527 59197 55656 61051 53999 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30694000 23771 1001 22309 44661 35951 35951 1 9606 Homo sapiens 0.07982786872116776 RVTHNPMIQK Unmodified 1222.6605 0.66046038 1919 A2VCQ9;O15541 SAMD13;RNF113A RING finger protein 113A yes no 0 0 1 4 0 1 33.921 33.975 4 0.027285 7141 20230619_1883_Aki_TMTPro18x_K_F4 62.303 23.946 14758 11183 19291 13939 21576 26993 19518 21826 24444 12418 20661 16199 18091 14849 17422 11191 17843 16671 13674 10265 19225 14029 22196 26170 19961 22384 24419 13196 21232 16248 18509 15178 17715 11634 17060 15780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7415300 23772 1919 22310 44662 35952 35952 1 9606 Homo sapiens 0.05803657022443076 RVTIMPK Unmodified 843.50004 0.50004356 2210;3750;4066 B4E380;K7EK07;B2R4P9;P84243;A8K4Y7;A0A1X8XL64;Q6NXT2;Q71DI3;Q16695;P68431;Q5TEC6;A0A590UJL8 H3F3B;H3F3A;H3F3C;HIST2H3A;HIST3H3;HIST1H3A;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.2;Histone H3.1t;Histone H3.1 no no 0 0 1 5.83 1.34 1 2 1 1 1 47.632 47.687 3 0.0074385 9785 20230619_1886_Aki_TMTPro18x_K_F6 101.54 14.219 42887000 33285000 36023000 38833000 34942000 40822000 42101000 41684000 47859000 34750000 40970000 37946000 45153000 37146000 36417000 44345000 49698000 44961000 39591000 30527000 37169000 38798000 36612000 41146000 42210000 42347000 48105000 35614000 42515000 38392000 45545000 38731000 37959000 44458000 47389000 42715000 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 66432000000 23773 2210;3750;4066 22311 44663;44664;44665;44666;44667;44668 35953;35954;35955;35956;35957 35956 5 9606 Homo sapiens 0.07203354096202474 RVTIMPK Oxidation (M) 859.49496 0.49495818 2210;3750;4066 B4E380;K7EK07;B2R4P9;P84243;A8K4Y7;A0A1X8XL64;Q6NXT2;Q71DI3;Q16695;P68431;Q5TEC6;A0A590UJL8 H3F3B;H3F3A;H3F3C;HIST2H3A;HIST3H3;HIST1H3A;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.2;Histone H3.1t;Histone H3.1 no no 0 1 1 5.5 0.5 1 1 40.088 40.179 3 0.012658 9384 20230619_1885_Aki_TMTPro18x_K_F5 79.469 18.709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23774 2210;3750;4066 22311 44669;44670 35958;35959 35958 1377 2 9606 Homo sapiens 0.059590502335936435 RVTLELGGK Unmodified 971.57638 0.57637963 1437;1475 A0A384MTJ7;P30837;B2R5T2;A0A024RC95;P47895;H0Y2X5;Q7Z3A2;B4DYU3;P05091;A0A384NPN7;Q53FB6;P05091-2;B4YAH7;B4DXX3;V9HW83;P00352;V9HVX6;B4DDF8;Q59EJ0;O94788;B4DH89;H0YMG7;O94788-3;O94788-2;O94788-4 ALDH1B1;ALDH1A3;DKFZp686G1675;ALDH2;HEL-S-53e;ALDH1A1;HEL-9;ALDH1A2 Aldehyde dehydrogenase X, mitochondrial;Aldehyde dehydrogenase family 1 member A3;Aldehyde dehydrogenase, mitochondrial;Retinal dehydrogenase 1;Retinal dehydrogenase 2 no no 0 0 1 2.5 0.5 1 1 44.302 44.38 3 0.00012137 11863 20230619_1881_Aki_TMTPro18x_K_F2 138.22 66.839 540500 411410 503460 512390 601420 648940 641860 652780 783770 525040 699560 699250 551130 503700 662100 689800 867100 713550 499280 377600 516090 511040 618170 645890 649080 663120 785790 543080 715390 695800 573080 535570 682720 691430 826590 678050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 331580000 23775 1437;1475 22312 44671;44672 35960 35960 1 9606 Homo sapiens 0.08945449197199196 RVTLLTPAGATGSGGGTSGDSSKGEDK Unmodified 2505.2307 0.23068782 2405 B3KSJ3;Q9BZI7-2;Q9BZI7;A0A6H0C8C5;Q0VAK7 UPF3B Regulator of nonsense transcripts 3B yes no 0 0 2 8 0 1 43.368 43.378 4 1.3872E-28 10841 20230619_1888_Aki_TMTPro18x_K_F8 178.44 153.61 54887 40252 49065 51951 47567 61643 46802 50583 57503 70513 66430 62578 71574 53113 44801 67993 57100 49558 50675 36964 50323 51618 49614 61320 47603 52954 58412 69937 67891 63560 71556 55898 46833 66998 54462 47293 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52868000 23776 2405 22313 44673 35961 35961 1 9606 Homo sapiens 0.03828169940425141 RVTSIADR Unmodified 916.50903 0.50902834 3683;2257 Q53FW2;P60891;B1ALA9;A0A2R8Y7H4;P60891-2;B2R860;P11908;A0A140VK41;P11908-2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 0 1 6.5 1.12 1 1 1 1 29.9 29.957 3 0.0028167 5634 20230619_1888_Aki_TMTPro18x_K_F8 95.523 68.22 161570 108260 131020 145530 192810 190240 148490 160580 217330 144980 172510 157540 146250 137390 174770 131620 191640 141660 149000 99498 136600 144430 194240 188320 154400 165630 215490 147920 177890 158700 151580 142030 177880 133100 182850 134630 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 418820000 23777 3683;2257 22314 44674;44675;44676;44677 35962;35963;35964 35964 3 9606 Homo sapiens 0.04743418986220149 RVTVTEGGVK Unmodified 1044.5928 0.59275797 1973 A6NHQ2 FBLL1 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 yes yes 0 0 1 8 0 1 36.828 36.813 3 0.00017046 8202 20230619_1888_Aki_TMTPro18x_K_F8 111.26 61.062 57671 42528 58469 62910 42372 33551 44781 51838 49645 64903 78283 78031 70352 73323 72036 62038 86432 85020 53300 39112 59079 61477 45247 36605 45255 52075 51474 65243 78628 78429 72223 75162 73957 63854 82549 80514 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41919000 23778 1973 22315 44678 35965 35965 1 9606 Homo sapiens 0.07224530363282611 RVTYDSDATSSACR Unmodified 1587.6947 0.69473322 880 A0A3B3ISI6;A0A087X0N2;O15243 LEPROT Leptin receptor gene-related protein yes no 0 0 1 4 0 1 31.765 31.826 3 0.0013988 6255 20230619_1883_Aki_TMTPro18x_K_F4 77.42 71.7 11644 8076.5 10252 13741 18180 15837 15323 16422 22529 12783 12904 16806 19970 13699 12931 17721 19307 17368 10746 7443.2 10667 13426 18162 15870 15825 16637 22142 13254 14019 16771 19812 14457 13649 17709 18398 16507 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10264000 23779 880 22316 44679 35966 35966 1 9606 Homo sapiens -0.07560636137941401 RVTYVVLDEADR Unmodified 1434.7467 0.74669243 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 1 4 0 1 44.848 44.892 3 0.00035092 11676 20230619_1883_Aki_TMTPro18x_K_F4 95.981 71.638 107030 84757 96977 98517 103600 119930 114920 110370 137240 130290 130810 135420 144360 122270 135360 144270 146930 155290 98875 77727 99470 98664 107490 119430 115890 113940 138310 130790 135150 136790 146480 127750 138490 145220 140530 147350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57707000 23780 1002 22317 44680 35967 35967 1 9606 Homo sapiens 0.04670895338131231 RVVAEPVELAQEFR Unmodified 1641.8839 0.88385462 3307 O75489;Q9UF24;Q53FM7 NDUFS3;DKFZp586K0821 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes no 0 0 1 5.5 0.5 1 1 52.308 52.383 3 8.5213E-09 14753 20230619_1885_Aki_TMTPro18x_K_F5 131.56 88.767 185150 176430 184060 217610 236560 242810 290640 276690 317710 247650 253770 219600 238590 214670 230460 243720 228510 244430 171370 161790 188120 216720 242820 244420 290540 279510 319330 251090 262510 224200 243690 223130 234470 244470 218770 232100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 533780000 23781 3307 22318 44681;44682 35968;35969 35968 2 9606 Homo sapiens 0.0885880421769798 RVVALSMSPVDDTFISGSLDK Oxidation (M) 2252.1358 0.13584814 223 Q6UXN9;A0A024R333 WDR82;TMEM113 WD repeat-containing protein 82 yes no 0 1 1 8 0 1 58.283 58.33 3 6.5502E-07 17136 20230619_1888_Aki_TMTPro18x_K_F8 110.38 89.007 50833 34456 43747 59232 53350 55751 53243 57138 70900 51287 59730 55967 59761 55908 49307 64009 67372 70092 46900 31762 45262 57678 54675 56642 54230 58130 70715 52333 61767 56652 60555 58088 51402 64488 64305 66499 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204010000 23782 223 22319 44683 35970 35970 133 1 9606 Homo sapiens 0.05986564935619754 RVVDESDETENQEEK Unmodified 1805.7915 0.79152995 2150 B3KMC2;B3KMD2;A8KAE0;O75717-2;O75717;B3KMD9 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes no 0 0 1 1 0 1 35.608 35.608 3 1.58E-19 8232 20230619_1880_Aki_TMTPro18x_K_F1 215.93 174.55 74076 40181 74272 71967 85607 93102 71276 74321 93175 85842 92089 97821 108030 83687 70680 61350 115610 92815 68353 37103 75572 70288 87670 92065 73409 77521 93666 86536 95214 98169 107950 85697 74934 63821 110020 87906 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124350000 23783 2150 22320 44684 35971 35971 1 9606 Homo sapiens -0.07913415167809035 RVVHLGVGTPGR Unmodified 1246.7258 0.72583783 2737 C9J384;D3DN44;Q9BQ75-2;Q9BQ75;B3KW72 CMSS1;hCG_2023567 Protein CMSS1 yes no 0 0 1 5.5 0.5 1 1 33.113 33.174 3 5.4281E-07 6940 20230619_1886_Aki_TMTPro18x_K_F6 147.87 105.89 26361 18440 21203 24142 23411 25713 24738 26364 27878 24945 29234 29810 26050 22926 28502 23073 32467 26549 24314 16940 22018 23930 24193 25893 24970 26849 28262 25432 29802 29799 26813 23881 29125 23400 30985 25201 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30673000 23784 2737 22321 44685;44686 35972 35972 1 9606 Homo sapiens 0.11234394539792447 RVVNVYR Unmodified 904.52428 0.52428448 3229 Q2M1V9;O14981;Q8N6J1;Q59HB6;O14981-2 BTAF1 TATA-binding protein-associated factor 172 yes no 0 0 1 4 0 1 31.734 31.794 3 0.064113 6226 20230619_1883_Aki_TMTPro18x_K_F4 57.811 44.303 35010 17904 47233 44267 64440 49402 45306 70543 48915 32278 49327 50776 37371 37604 49945 26535 52374 39865 32391 16629 47169 42592 64854 50039 46988 69501 49583 35201 50102 50262 39159 38615 50563 27676 50001 37768 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5297100 23785 3229 22322 44687 35973 35973 1 9606 Homo sapiens 0.0682033057408944 RVVYPLEK Unmodified 1002.5862 0.58621603 1807 O60832;A0A8Q3WLC8;A0A8Q3SIY6;A0A8Q3SIS9;A0A8Q3SJE8;A0A8Q3WLD1;A0A8Q3WLG7;A0A8Q3SIX2;C9IYT0;O60832-2;A0A8Q3WLE4;A0A8V8TKY9 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 0 0 1 2.5 0.5 1 1 43.675 43.751 3 0.0026876 11519 20230619_1881_Aki_TMTPro18x_K_F2 105.36 45.558 298870 227030 291040 292960 346930 364170 356800 362590 414880 293500 316640 323870 344410 281720 339000 343830 347520 323640 276180 208450 297160 291400 356110 362790 360900 368610 415120 301450 330830 326120 350340 295270 345300 343420 332260 307690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 469230000 23786 1807 22323 44688;44689 35974;35975 35974 2 9606 Homo sapiens 0.08502637202559526 RVYATILNAGTNTDGFK Unmodified 1839.9479 0.94791144 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 1 4 0 1 54.198 54.214 3 1.4018E-23 15859 20230619_1883_Aki_TMTPro18x_K_F4 204.9 175.58 167580 134030 146910 145480 104400 122880 133800 134580 134290 199490 188290 180100 186650 167150 171410 213200 176340 181810 154780 122830 150290 145790 112690 126300 133360 138430 139200 197410 190520 183290 189850 175210 175080 211640 168710 173000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3024899999.9999995 23787 3606 22324 44690 35976 35976 1 9606 Homo sapiens 0.061535395839655394 RVYSLFLDESR Unmodified 1383.7147 0.71466402 4699 Q9Y230;B3KNL2;Q9Y230-2 RUVBL2 RuvB-like 2 yes no 0 0 1 1.5 0.5 1 1 51.96 51.979 3 5.3327E-05 15136 20230619_1880_Aki_TMTPro18x_K_F1 132.47 86.011 76835 56634 55458 76961 56064 69567 61336 75635 90932 87840 75061 96584 96297 91680 68473 115660 107590 104880 70839 52034 58254 75919 58505 71016 62476 77156 90383 88395 78797 97453 96411 95930 72536 115100 102550 99736 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239540000 23788 4699 22325 44691;44692 35977 35977 1 9606 Homo sapiens 0.03815527654978723 RWDDSQK Unmodified 933.43044 0.43044367 437 A0A024R7B7;Q16543;Q6FG59;K7EKQ2 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 0 1 5 0 1 35.549 35.639 3 0.0094731 7790 20230619_1885_Aki_TMTPro18x_K_F5 90.709 53.063 86808 45090 110400 108730 148030 149610 116130 131020 117580 70345 115160 104580 94802 81600 126580 33345 128240 85783 80266 41855 110720 104980 149740 147650 119060 133470 119410 75444 117380 103810 98911 82434 127700 37546 122390 81077 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52178000 23789 437 22326 44693 35978 35978 1 9606 Homo sapiens -0.03893433318864936 RWELSSDQPYL Unmodified 1392.6674 0.66737948 3346 Q6FG42;Q32Q14;O95182;M0R0N0 NDUFA7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes no 0 0 1 5.5 0.5 1 1 56.935 57.002 2 0.0018376 16820 20230619_1886_Aki_TMTPro18x_K_F6 102.07 83.907 50248 45007 55456 61247 60035 73215 63154 63829 72275 67751 63999 62371 70185 61800 74698 68652 71403 74244 46530 41322 56016 60649 62127 72880 63781 65953 72802 68122 66338 63547 71663 64141 75663 69215 68369 70447 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 74260000 23790 3346 22327 44694;44695 35979;35980 35980 2 9606 Homo sapiens -0.013247516159935913 RWENFIHSENR Unmodified 1486.7066 0.70655895 3067 P19784;H3BNI9;H3BSA1 CSNK2A2 Casein kinase II subunit alpha' yes no 0 0 1 7.5 0.5 1 1 41.62 41.654 4 1.3893E-07 10161 20230619_1888_Aki_TMTPro18x_K_F8 169.23 136.49 29596 21653 26787 29345 24001 33650 29157 30302 41396 32440 28096 38804 43258 34025 26573 55019 49555 52748 27327 19894 27428 29050 25375 33598 29473 31246 40945 32888 30169 38953 42895 36371 28741 54726 47214 50113 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47688000 23791 3067 22328 44696;44697 35981 35981 1 9606 Homo sapiens -0.017326065417591963 RWFGFLEAQQAFQSVGTK Unmodified 2099.0589 0.058858868 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5;V9GZ76 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 1 6 0 1 62.555 62.606 3 0.064516 19292 20230619_1886_Aki_TMTPro18x_K_F6 41.412 29.436 32206 26456 32443 33498 24702 28842 40515 29785 29549 35017 26724 38065 40859 38728 41717 53324 30554 44218 29782 24279 32838 33194 26667 29540 39575 30549 30659 35195 28280 38521 41310 40663 41861 52808 29437 42044 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63790000 23792 3402 22329 44698 35982 35982 1 9606 Homo sapiens 0.053291792920390435 RWIGSETDLEPPVVK Unmodified 1724.9097 0.90973501 2285 B2RAH5;O14974-2;O14974;A0A024RBF1;O14974-4;F8VZN8;O14974-3 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A yes no 0 0 1 7 0 1 54.22 54.283 3 0.0017183 15423 20230619_1887_Aki_TMTPro18x_K_F7 72.321 32.208 40987 48757 55148 44173 56108 39786 62390 42777 39875 45422 48634 32509 36564 30188 52945 37384 30023 37163 38116 44562 54772 45005 58084 40742 61832 43626 42265 45352 48900 33559 38437 31617 52204 37491 28996 35273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32570000 23793 2285 22330 44699 35983 35983 1 9606 Homo sapiens 0.07627653669283063 RWIYEDVER Unmodified 1264.62 0.62003536 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-10;O43852-6;O43852-5;O43852-13;O43852-11;O43852-14 CALU Calumenin yes no 0 0 1 4.5 0.5 1 1 45.247 45.308 3 0.00024382 11758 20230619_1885_Aki_TMTPro18x_K_F5 121.5 87.616 354200 267000 296570 353000 257920 377510 329700 402280 490680 536650 479810 523920 543520 455660 397150 645030 580070 657760 326920 245220 305940 349690 274080 380150 333420 412550 490710 534660 495640 530120 545920 482400 417920 645020 553770 624320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 742990000 23794 2386 22331 44700;44701 35984;35985 35985 2 9606 Homo sapiens -0.001689860963551837 RWLHEINQNCDDVCR Unmodified 2013.8898 0.8897614 3926 Q15286;F5H157;Q15286-2 RAB35 Ras-related protein Rab-35 yes no 0 0 1 6 0 1 41.187 41.281 4 3.397E-05 10096 20230619_1886_Aki_TMTPro18x_K_F6 101.36 95.326 22812 15825 22231 25139 26119 27134 25361 27486 41551 28658 34589 36070 40144 33316 30266 36877 40197 42114 21069 14571 22705 24635 26821 27286 26110 28085 41092 29158 36051 36197 40332 34653 31534 37274 38377 39937 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30552000 23795 3926 22332 44702 35986 35986 1 9606 Homo sapiens -0.07662788604579873 RWPIVGVR Unmodified 981.58722 0.58721908 1181 Q53T76;A8K1Z2;A0A140VJK2;P43304;B7Z601;P43304-2 GPD2 Glycerol-3-phosphate dehydrogenase;Glycerol-3-phosphate dehydrogenase, mitochondrial yes no 0 0 1 8 0 1 44.761 44.789 3 0.0073387 11381 20230619_1888_Aki_TMTPro18x_K_F8 77.282 62.613 18635 14851 18392 19291 23883 26150 21497 24040 33729 24439 21394 23390 27672 21366 22119 26908 24896 30726 17227 13634 18791 19204 24332 25870 22184 24699 33169 24669 22811 23721 27772 22420 22771 27147 23834 29122 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25756000 23796 1181 22333 44703 35987 35987 1 9606 Homo sapiens 0.09568896362145551 RWSSSDWTLDPQELESK Unmodified 2062.9596 0.95959833 2607 B4DW13;Q6YP21-3;Q6YP21;A0A0A0MRN7 hCG_23341;CCBL2 Kynurenine--oxoglutarate transaminase 3 yes no 0 0 1 5.5 0.5 1 1 58.645 58.705 3 1.8077E-09 17569 20230619_1886_Aki_TMTPro18x_K_F6 137.44 115.31 83553 57604 71378 74709 47769 74867 64958 74146 84879 91993 89270 100880 98873 91670 76984 102630 113010 119280 77090 52914 73202 74047 52192 75616 65180 76261 85558 92276 91853 101650 99656 95435 80797 103810 107820 113100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86457000 23797 2607 22334 44704;44705 35988 35988 1 9606 Homo sapiens -0.02936308183325309 RWTDENIDTVALK Unmodified 1559.7944 0.79437091 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 6 0 1 51.832 51.909 3 2.1207E-05 14732 20230619_1886_Aki_TMTPro18x_K_F6 94.673 50.421 63590 61065 64820 73908 66977 79512 81612 83176 90768 85792 76741 90670 89261 76726 85895 121800 105330 129810 58873 55983 65850 73661 69829 80049 81712 84783 91419 86707 80059 91386 90592 82002 88686 121980 100760 123120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81640000 23798 3881 22335 44706 35989 35989 1 9606 Homo sapiens 0.03686549538315376 RYADAQLSCQGR Unmodified 1423.6626 0.66264523 4459 Q9BWP8-8;Q9BWP8-7;Q9BWP8-6;Q9BWP8-5;Q9BWP8-4;Q9BWP8-3;Q9BWP8-2;Q9BWP8-9;Q9BWP8;Q9BWP8-10 COLEC11 Collectin-11 yes no 0 0 1 7.5 0.5 1 1 32.863 32.907 3 5.6363E-24 6668 20230619_1888_Aki_TMTPro18x_K_F8 210.64 188.88 66930 52178 63920 72861 87636 85452 89692 91222 110160 77487 113050 129740 97202 100370 115890 103690 122820 124620 61847 47945 65593 72030 89145 85588 90924 92439 111000 80673 115310 128330 100730 104580 117830 105370 117460 118130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 283840000 23799 4459 22336 44707;44708 35990;35991 35991 2 9606 Homo sapiens -0.03223959030447077 RYADLTEDQLPSCESLK Unmodified 2023.9521 0.95207011 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8;B4DKL5;B4DMJ7 PGAM1;hCG_2015269 Phosphoglycerate mutase;Phosphoglycerate mutase 1 yes no 0 0 1 4.5 0.5 1 1 51.294 51.345 3 5.7651E-07 14350 20230619_1885_Aki_TMTPro18x_K_F5 118.55 106.38 166300 157370 158230 176720 118230 71169 172730 165810 88985 277630 260940 255650 287810 223380 238140 274780 244560 294280 153860 144180 160850 175660 126730 82425 168630 165930 102990 273400 260790 259350 290260 234380 243600 276280 234280 279120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 222310000 23800 3475 22337 44709;44710 35992;35993 35993 2 9606 Homo sapiens -0.018947837752875785 RYAHVVLR Unmodified 1012.593 0.59303274 3710 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 1 5 0.816 1 1 1 31.161 31.219 3 0.00085555 6108 20230619_1885_Aki_TMTPro18x_K_F5 114.93 43.709 82069 65179 75195 86254 89934 107090 93855 91609 120660 70456 71688 63840 68479 58346 85899 70155 82534 67136 75820 59851 77262 85611 92475 106310 95178 94095 119300 72256 75704 64975 70847 60995 86761 70198 78894 63854 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54345000 23801 3710 22338 44711;44712;44713 35994;35995 35994 2 9606 Homo sapiens 0.08723994873798802 RYASLLK Unmodified 849.50724 0.50723743 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HHY9 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 1 5.5 0.5 1 1 43.396 43.483 3 0.011151 10995 20230619_1885_Aki_TMTPro18x_K_F5 93.429 10.757 216710 231680 151690 93038 385130 979460 279590 240920 1081800 16640 0 29864 30087 30655 35056 20425 35265 38586 200280 210930 163410 116640 385190 904830 311250 290530 1009600 32573 44987 29795 30391 31052 35482 21756 33762 36445 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 270840000 23802 1723 22339 44714;44715 35996 35996 1 9606 Homo sapiens 0.07646409968288026 RYAVPSAGLR Unmodified 1088.6091 0.60907674 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 4.5 0.5 1 1 37.244 37.312 3 0.00047809 8389 20230619_1885_Aki_TMTPro18x_K_F5 108.31 94.543 182190 137460 128810 136860 166150 250030 157080 176800 305370 50662 51240 62466 53938 54487 74601 54406 65572 55981 167970 125910 135970 139750 170390 242390 163270 182190 291720 58923 64725 62678 56139 56414 74879 54841 62759 53190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150530000 23803 3758 22340 44716;44717 35997 35997 1 9606 Homo sapiens 0.0683165632001419 RYDDPEVQK Unmodified 1148.5462 0.54620171 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z1V7;H0Y8K0;A0A3B3ITI4 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 1 3 0.816 1 1 1 37.057 37.109 3 0.00012006 8530 20230619_1881_Aki_TMTPro18x_K_F2 138.36 85.645 186370 128170 183160 191270 214640 220940 230940 215810 288790 272100 295860 290830 291900 251200 238170 247110 356320 321900 172140 117920 186850 188300 220850 221020 233630 222340 291160 272600 302920 292930 295630 260330 249670 252570 339540 305080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2959199999.9999995 23804 1488 22341 44718;44719;44720 35998 35998 1 9606 Homo sapiens -0.022129542586753814 RYDFQNPSR Unmodified 1181.5578 0.55776945 645 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 0 0 1 5.33 3.09 1 1 1 34.558 34.581 3 0.00010515 7800 20230619_1880_Aki_TMTPro18x_K_F1 134.84 110.5 119110 83401 113560 123620 149820 154630 141830 149810 170210 139570 189800 168900 175900 145250 148770 164910 185170 171820 110000 76721 116420 121890 152500 153870 144360 153070 172400 142550 193020 169470 178660 151650 153850 165760 176730 163170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 231740000 23805 645 22342 44721;44722;44723 35999;36000 35999 2 9606 Homo sapiens -0.025747124446979797 RYDGSQQALDLK Unmodified 1392.6997 0.69974224 4657 Q9UBU9;E9PIN3;Q59E96;Q9UBU9-2;B4E227;B4E3J0 NXF1 Nuclear RNA export factor 1 yes no 0 0 1 7 0 1 43.528 43.607 3 1.6005E-05 10738 20230619_1887_Aki_TMTPro18x_K_F7 131.08 95.669 177820 144910 174400 198040 210420 242520 230400 214000 261330 248880 251120 257070 273870 224320 220340 307660 304380 288470 164400 133100 178180 196120 216350 241140 232020 221550 264110 249960 259120 259580 276290 236880 230110 306480 290300 274250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152800000 23806 4657 22343 44724 36001 36001 1 9606 Homo sapiens 0.019100357869774598 RYDQDLCYTDILFTEQER Unmodified 2364.0692 0.069225137 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 1 4.5 0.5 1 1 59.389 59.418 3 1.7975999999999999E-38 18081 20230619_1883_Aki_TMTPro18x_K_F4 208.17 191.55 83547 67380 75330 80109 75780 86303 82321 78787 108200 96922 80238 98590 97280 88294 95281 108170 91887 118260 77184 61800 77242 79944 78938 86637 83403 81510 107680 97074 84529 99595 98698 92465 96818 108900 88132 112120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144000000 23807 2436 22344 44725;44726 36002;36003 36002 2 9606 Homo sapiens -0.058246706263162196 RYDVVADCSDNVPTR Unmodified 1765.8053 0.8053463 3355 O95396 MOCS3 Adenylyltransferase and sulfurtransferase MOCS3;Molybdopterin-synthase adenylyltransferase;Molybdopterin-synthase sulfurtransferase yes yes 0 0 1 4 0 1 39.794 39.836 3 3.8207E-14 9465 20230619_1883_Aki_TMTPro18x_K_F4 183.23 169.2 33415 26910 33109 34055 41460 40325 37119 39846 49462 38301 48629 48083 49132 40194 41509 44424 50707 46707 30892 24697 33782 33890 42266 40301 38067 40691 49615 39108 49938 48115 49762 41948 42864 44699 48399 44353 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22281000 23808 3355 22345 44727 36004 36004 1 9606 Homo sapiens -0.04692416149737255 RYEDQELTGK Unmodified 1237.5939 0.59388018 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 1 3.5 0.5 1 1 38.625 38.673 3 7.4374E-05 9060 20230619_1882_Aki_TMTPro18x_K_F3 117.95 93.657 72667 53509 67039 73431 82059 84614 77215 75055 95774 96193 108300 99264 103970 89539 88525 93417 110950 94470 67108 49169 68823 72640 83912 84500 78715 77905 97026 96196 110250 100310 105530 92885 91546 93877 105830 89777 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192640000 23809 4666 22346 44728;44729 36005 36005 1 9606 Homo sapiens -0.015413000585112968 RYEEEEEEEEDEEEMEEEK Unmodified 2517.9337 0.93369826 2595 B4DUT2 yes yes 0 0 1 1 0 1 45.76 45.76 3 4.4652E-20 12604 20230619_1880_Aki_TMTPro18x_K_F1 190.23 187.31 15421 12130 12267 13560 11831 16335 11809 13951 15710 18318 19435 19784 18985 18444 14879 18703 22519 20089 14232 11120 12726 13614 12365 16248 12042 14527 15943 18322 19740 19966 19217 19074 15643 18859 21455 19075 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23417000 23810 2595 22347 44730 36006 36006 1 9606 Homo sapiens -0.26455124579706535 RYEEQELK Unmodified 1093.5404 0.54038805 1665 A0A7I2V4I5;Q5T200-2;Q5T200 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 0 0 1 3.5 0.5 1 1 36.889 36.938 3 0.0073836 8366 20230619_1882_Aki_TMTPro18x_K_F3 76.815 47.007 51471 44562 54134 60562 71298 77662 62250 64877 80400 61167 84859 89613 77846 73516 75914 63136 101830 91832 47631 40917 55064 60039 72471 76928 63860 67067 80967 62926 86577 89106 79656 75806 78577 65269 97112 86955 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33757000 23811 1665 22348 44731;44732 36007 36007 1 9606 Homo sapiens -0.0026405277033063612 RYELLEHK Unmodified 1086.5822 0.58219329 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 1 7 0 1 38.985 39.048 4 0.012233 8850 20230619_1887_Aki_TMTPro18x_K_F7 78.816 51.074 126990 89678 104370 125660 105110 137670 124190 122370 167720 137720 135470 136290 160020 136340 105490 212060 185360 168410 117150 82439 108080 124030 109930 137860 125420 126500 167050 138430 141510 138610 160070 144570 113230 209100 176460 160480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57611000 23812 4666 22349 44733 36008 36008 1 9606 Homo sapiens 0.04236547708865146 RYELPAPSSGQK Unmodified 1331.6834 0.68336389 2250 Q53HE3;B2R7W3;O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes no 0 0 1 8 0 1 40.817 40.809 3 6.5196E-05 9792 20230619_1888_Aki_TMTPro18x_K_F8 116.9 85.834 30705 25683 33308 32037 35493 41591 40636 37018 51386 38075 42443 38091 39163 30923 36421 42118 37175 39098 28416 23564 33653 31959 36857 41219 40988 38164 51330 38455 43789 38452 39930 32733 37159 41959 35574 37160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27166000 23813 2250 22350 44734 36009 36009 1 9606 Homo sapiens 0.030789546209007312 RYEMLQDNVEGYR Unmodified 1671.7675 0.76750423 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 1 4.5 0.5 1 1 44.532 44.593 3 2.047E-15 11563 20230619_1883_Aki_TMTPro18x_K_F4 165.49 152.66 84383 61343 86346 98337 83943 92911 87004 84397 109320 113770 111700 108770 124100 100330 90203 140430 136610 131770 77987 56476 87578 96130 87495 94134 88262 87629 110260 113270 114970 110420 124670 105920 95158 139830 130230 125260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92911000 23814 3440 22351 44735;44736 36010 36010 1 9606 Homo sapiens -0.041508823445383314 RYEMLQDNVEGYRR Oxidation (M) 1843.8635 0.86352988 3440 P12270 TPR Nucleoprotein TPR yes yes 0 1 2 6 0 1 37.609 37.685 4 0.00026182 8598 20230619_1886_Aki_TMTPro18x_K_F6 94.45 88.034 55124 56433 74855 65007 114680 81514 107250 84632 62936 68600 82098 43588 43142 32110 121450 33273 41299 31255 51202 51702 74907 65209 115210 81376 107150 85843 67397 69376 81543 45086 48851 33607 117210 33598 40220 29744 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54016000 23815 3440 22352 44737 36011 36011 2071 1 9606 Homo sapiens -0.024647345044513713 RYEMLQDNVEGYRR Unmodified 1827.8686 0.86861526 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 2 6.5 0.5 1 1 40.369 40.449 4 1.4659E-05 9440 20230619_1887_Aki_TMTPro18x_K_F7 118.19 112.16 87147 58919 92131 106500 109830 106670 119790 116750 168390 129800 141460 134770 154470 133760 143890 161840 152380 123150 80534 54352 93527 103570 112900 108050 121640 118940 167600 130730 146920 136650 156770 139420 147060 160000 145510 117480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51123000 23816 3440 22352 44738;44739 36012 36012 1 9606 Homo sapiens -0.012204306418425404 RYESHPVCADLQAK Unmodified 1672.7991 0.79913871 2760 C9JRZ6;A4D1N4;Q9NX63 CHCHD3 MICOS complex subunit MIC19 yes no 0 0 1 6.5 0.5 1 1 37.207 37.274 3;4 2.6147E-08 8444 20230619_1886_Aki_TMTPro18x_K_F6 145.52 130.36 165350 120700 146340 149730 207290 207400 193640 182370 220080 210100 232230 205780 246640 215740 166290 254460 258850 235200 152640 110800 151160 149580 210020 204830 196790 188740 223220 210810 238030 209640 247570 224220 176100 253760 246610 223690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 557760000 23817 2760 22353 44740;44741 36013;36014 36013 2 9606 Homo sapiens -0.01034889590550847 RYEVPLETPHVHSR Unmodified 1718.8853 0.8852516 532 A0A024R8Q1;P10253;I3L0S5;I3L3L3 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase yes no 0 0 1 7 0 1 35.484 35.556 5 6.47E-05 7564 20230619_1887_Aki_TMTPro18x_K_F7 96.673 81.986 11649 12939 11325 15698 12488 12656 11571 12253 13776 13751 14820 19479 12854 16139 14867 13479 19426 21135 10793 11857 11572 15581 12850 13026 11794 12597 13953 13990 15106 19376 13319 16601 15326 14022 18555 19986 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10175000 23818 532 22354 44742 36015 36015 1 9606 Homo sapiens 0.05456438306441669 RYFGGTEDR Unmodified 1099.5047 0.50467125 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 1 5 0.816 1 1 1 32.736 32.795 3 0.0010687 6673 20230619_1885_Aki_TMTPro18x_K_F5 98.73 82.527 80797 64020 68958 70160 79468 82762 83140 83924 97028 108160 107690 115580 124780 108350 90183 132830 143130 130940 74605 58678 71196 70552 81816 82798 84054 86281 98573 108220 110750 116760 125240 113280 95462 132860 136350 124430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 810460000 23819 1426 22355 44743;44744;44745 36016 36016 1 9606 Homo sapiens -0.04110090227322871 RYFSEGDK Unmodified 1000.4614 0.46140945 427 P20839-6;B4DNJ7;P20839-5;P20839-7;P20839-3;P20839;P20839-2;P20839-4;Q6ZNB1;A0A024R725;C9J381;B3KRZ3;Q5H9Q6;A0A3B3IRL5 IMPDH1;IMPDH;DKFZp781N0678 Inosine-5'-monophosphate dehydrogenase 1;Inosine-5'-monophosphate dehydrogenase yes no 0 0 1 6 0.816 1 1 1 38.266 38.346 3 0.011747 8836 20230619_1886_Aki_TMTPro18x_K_F6 74.841 40.763 143860 116870 143290 130250 178720 173480 171500 164700 199100 200590 196760 157460 228990 160160 178490 233160 219160 166660 133020 107130 146040 131090 182480 172050 174170 169740 201300 199520 203080 162130 230090 169080 184910 229250 208930 159190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253900000 23820 427 22356 44746;44747;44748 36017 36017 1 9606 Homo sapiens -0.03880280004614178 RYFTWDPSR Unmodified 1226.5833 0.58325592 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 1 4 0 1 46.928 46.97 3 0.036215 12606 20230619_1883_Aki_TMTPro18x_K_F4 48.442 15.918 111030 64842 88224 102820 93620 151820 111650 116900 218100 79127 70001 68535 69166 66875 75019 90035 101260 60554 102310 59751 91757 101250 97970 148790 114660 120780 209780 82025 78722 70073 71076 70185 77696 88425 96353 57977 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80315000 23821 3900;2497 22357 44749 36018 36018 1 9606 Homo sapiens -0.020972379222712334 RYGDFFIR Unmodified 1072.5454 0.54541385 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;B0QY90;B3KNG0;Q7Z5X3;Q8N7H0;H0Y7E6 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 1 3.5 0.5 1 1 47.528 47.588 3 0.00081429 13071 20230619_1882_Aki_TMTPro18x_K_F3 118.26 66.41 184500 141870 141570 184590 177440 212860 186140 199930 235480 96718 95838 89801 98668 80366 158650 102670 105710 84334 170210 130270 148210 183190 182020 212700 188590 202360 231090 103320 105130 91295 103460 84384 157030 101980 101510 80374 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168730000 23822 2176 22358 44750;44751 36019;36020 36019 2 9606 Homo sapiens 0.012042958829397321 RYGEDSEQFR Unmodified 1285.5687 0.56872807 1259 A0A1B0GWD6;A0A1B0GVI9;A0A1C7CYW4;A0A1B0GVW0;A0A1B0GUT7;B7Z4S4;A0A1B0GVB9;A0A1B0GTU8;A0A1B0GTB0;B7Z413;A0A1B0GU12;B7Z1I9;H7C3E1;A0A1B0GWJ8;A0A1B0GVC7;O75787-2;O75787 ATP6AP2 Renin receptor yes no 0 0 1 2 0 1 33.109 33.167 3 4.6675E-05 6930 20230619_1881_Aki_TMTPro18x_K_F2 132.25 96.836 29088 19051 22509 27077 28867 34832 29509 22770 39040 35214 41193 39751 41236 32933 28040 39411 40463 42770 26813 17522 23540 26760 29555 34345 29987 24452 39301 35088 42130 39920 41450 34552 29495 39654 38611 40579 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39149000 23823 1259 22359 44752 36021 36021 1 9606 Homo sapiens -0.06263354861061998 RYGGGGYGR Unmodified 941.44676 0.44676244 539 J3KP15;Q53FN0;A0A024R8U5;Q01130;B3KUY1 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 yes no 0 0 1 3.25 2.77 1 2 1 25.949 25.995 3 0.0013964 4838 20230619_1880_Aki_TMTPro18x_K_F1 78.192 66.125 188800 112550 182250 195690 255080 279440 286660 234130 255250 133280 178070 168430 157360 144980 202570 116310 217000 166540 174230 103830 186940 191710 259870 275000 285950 239750 258250 141420 185530 168660 163540 148810 205470 120450 207130 157840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 344760000 23824 539 22360 44753;44754;44755;44756 36022;36023;36024 36022 3 9606 Homo sapiens -0.02630307362107942 RYIFDNVAK Unmodified 1124.5978 0.59784335 3928 V9HW95;Q15293;Q15293-2 HEL-S-84;RCN1 Reticulocalbin-1 yes no 0 0 1 2.5 0.5 1 1 46.882 46.959 3 0.00027676 12733 20230619_1882_Aki_TMTPro18x_K_F3 112.04 78.175 131600 83394 98908 161700 178880 237280 174860 214130 270220 207270 221670 293820 257400 238880 155440 353730 316510 346000 121270 77035 104860 157580 179950 233380 179390 220020 267810 212590 231590 292550 257100 254110 169860 352530 301480 328610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227950000 23825 3928 22361 44757;44758 36025 36025 1 9606 Homo sapiens 0.040528342258767225 RYIGIVK Unmodified 847.52797 0.52797287 470 A0A024R7T3;P52597;B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 0 1 5 0.816 1 1 1 42.791 42.865 3 0.0012168 10727 20230619_1885_Aki_TMTPro18x_K_F5 153.15 77.838 1301000 1136900 1261800 1278300 1744500 1880600 1827500 1759500 1935800 1548400 1673000 1598700 1798400 1434700 1437100 1858800 1794700 1568600 1203200 1041900 1292700 1287600 1775500 1853300 1840300 1799700 1954600 1578400 1733600 1616400 1814100 1507700 1489700 1843800 1712200 1493800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 890960000 23826 470 22362 44759;44760;44761 36026;36027 36027 2 9606 Homo sapiens 0.09811000347929166 RYLDYEK Unmodified 985.4869 0.48689592 1532 A0A3B3IUD7;Q14690 PDCD11 Protein RRP5 homolog yes no 0 0 1 7 0 1 41.667 41.738 3 0.084108 9991 20230619_1887_Aki_TMTPro18x_K_F7 49.96 13.391 65559 44444 55240 65173 64866 81560 62388 68654 97507 61357 70843 61975 62694 57368 57478 76713 84308 59849 60477 40886 57185 64282 66727 80877 64123 70813 96149 62514 73501 62814 64075 60303 60118 75784 80236 57114 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90049000 23827 1532 22363 44762 36028 36028 1 9606 Homo sapiens -0.006428054821981277 RYLEEQK Unmodified 964.49779 0.49779495 1525;3803 Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4;A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 no no 0 0 1 5 0.816 1 1 1 36.653 36.721 3 0.001935 8231 20230619_1886_Aki_TMTPro18x_K_F6 130.22 93.2 596700 360240 492030 592760 686040 773510 692540 715100 930900 703930 767810 759240 784620 673150 615970 612000 961580 737110 550050 332060 512150 581370 698200 766650 704920 734060 927670 714230 795830 765060 792720 694140 648230 623140 915130 699610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 493680000 23828 3803;1525 22364 44763;44764;44765 36029;36030 36030 2 9606 Homo sapiens 0.01412596892100737 RYLEMLLEYLQDYTDRVK Oxidation (M) 2363.1831 0.18313268 2066 B3KY12;A8K7V1;A8K566;Q12874;Q53HM6;B4DW90 SF3A3 Splicing factor 3A subunit 3 yes no 0 1 2 2 0.816 1 1 1 72.774 72.812 3 0.067094 23403 20230619_1882_Aki_TMTPro18x_K_F3 41.202 32.708 0 0 0 0 691.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 691.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4639700 23829 2066 22365 44766;44767;44768 36031 36031 1294 1 9606 Homo sapiens 0.05606844206658934 RYLVLDCVPEER Unmodified 1547.7766 0.77661235 1699 A0A7P0T8N8;O14776-2;O14776 TCERG1 Transcription elongation regulator 1 yes no 0 0 1 4.75 0.829 2 1 1 48.091 48.168 3 1.7376E-05 12947 20230619_1885_Aki_TMTPro18x_K_F5 129.77 100.08 143890 120950 146600 134240 142960 169280 166220 183780 333030 147730 164410 142620 157050 133420 134880 160150 164240 157070 133100 110840 148600 135040 149830 168830 171260 185670 322400 151490 176040 144860 159580 139350 139300 160260 156810 149250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 329340000 23830 1699 22366 44769;44770;44771;44772 36032;36033;36034;36035 36034 4 9606 Homo sapiens 0.024635110117969816 RYNIPHGPVVGSTR Unmodified 1551.827 0.82700844 3617 P50402;A0A804HIV7;A0A804HLA2 EMD Emerin yes no 0 0 1 5 0 1 36.33 36.421 4 4.069E-07 8061 20230619_1885_Aki_TMTPro18x_K_F5 139.86 118.4 37561 34290 39732 47529 45564 47165 44011 45420 65668 38805 49750 40722 43481 37742 47091 38386 47082 42269 34773 31487 40310 46885 46834 47679 45125 46356 64929 39691 51457 41192 44757 39068 47770 38815 45015 40124 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126540000 23831 3617 22367 44773 36036 36036 1 9606 Homo sapiens 0.07316801451815991 RYNVGCTK Unmodified 996.4811 0.48109903 952 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;A0A994J5J9;Q8IXK0-2;Q8IXK0-4;Q8IXK0;Q8IXK0-5;Q8IXK0-3;P78365;A0A8I5KY19 PHC2;HPH2 Polyhomeotic-like protein 2 yes no 0 0 1 3 0 1 33.662 33.728 3 0.0011466 7062 20230619_1882_Aki_TMTPro18x_K_F3 119.62 89.224 52299 23230 56117 68842 77091 89721 58697 73097 75520 62292 82106 101520 77577 84320 64792 43320 130120 111930 48250 21680 57077 65917 77981 88645 60821 75515 76203 64754 83841 100550 78909 85379 69573 48110 123740 105650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23480000 23832 952 22368 44774 36037 36037 1 9606 Homo sapiens -0.017282272654938424 RYNVLGAETVLNQMR Unmodified 1762.9148 0.91483717 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 1 4 0 1 53.62 53.639 3 3.6188E-42 15665 20230619_1883_Aki_TMTPro18x_K_F4 242.41 173.06 142690 114970 131970 142680 135920 162860 167840 168390 189310 96670 93986 76669 89408 79774 122690 108910 99897 70887 131850 105500 135120 142090 141850 163210 167970 169720 187520 101100 100690 79024 93038 83666 122830 106920 95600 67838 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193720000 23833 3957 22369 44775 36038 36038 1 9606 Homo sapiens 0.06389634260290222 RYPLSGMGLPTFK Unmodified 1465.7752 0.77515579 3203 O00116;B7Z3Q4;A0A7P0T984;A0A1B0GWA2;A0A7P0TAL3;A0A2R8YEL0;Q53SG6;A0A7P0T9C9;A0A7P0TAU9;A0A7P0T8Q7;A0A7P0TA54 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes no 0 0 1 7 0 1 57.149 57.204 3 0.060303 16641 20230619_1887_Aki_TMTPro18x_K_F7 44.366 18.707 54314 49715 54198 52651 50804 67759 66707 59476 68450 72115 75427 72647 85157 70765 83665 90245 85083 89990 50259 45530 55031 53154 53543 67172 66383 61677 69932 72232 77489 73708 86518 74101 85219 90340 81427 85458 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34332000 23834 3203 22370 44776 36039 36039 1 9606 Homo sapiens 0.060899217136920925 RYPSGEER Unmodified 992.46756 0.46755746 344 E9PKH6;A0A024R5K3;E9PPW7;Q53G17;O00217;E9PN51;F8W9K7;B4DYI3;H0YDT4 NDUFS8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes no 0 0 1 3 0 1 23.068 23.22 3 0.048691 3779 20230619_1882_Aki_TMTPro18x_K_F3 50.805 22.406 201890 124990 219940 245670 360520 349610 279060 314440 295710 206810 289630 282870 261140 235070 277250 173770 328080 269600 186540 115500 224140 239270 360710 344690 286660 320640 299780 217200 296220 282080 268320 240860 283830 181350 313010 255260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73569000 23835 344 22371 44777 36040 36040 1 9606 Homo sapiens -0.02897761773090224 RYPSSISSSPQK Unmodified 1335.6783 0.67827852 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;Q14157-1;Q14157-4;B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like no no 0 0 1 3 0 1 36.794 36.849 3 2.112E-05 8299 20230619_1882_Aki_TMTPro18x_K_F3 126.19 103.47 87379 73068 67752 66778 145340 181210 127210 112300 217010 4586.6 3679.4 11152 8634.2 9784.6 16025 8506.2 10668 7296.8 80658 66858 71676 69440 144730 172900 131760 116560 206800 11125 14081 11051 9137.1 10049 15825 8529.6 10236 6955.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92279000 23836 3877;3878 22372 44778 36041 36041 1 9606 Homo sapiens 0.023866507582852137 RYPTPYPDELK Unmodified 1377.6929 0.69286595 1827 Q96RT1-8;Q96RT1;A0A8V8TN18;A0A8V8TML4;A0A8V8TPC7;A0A8V8TP09;A0A8V8TN23;Q1RMC9;H0YA04;A0A8V8TML6;Q96RT1-2;Q96RT1-9;Q96RT1-3;Q96RT1-5;Q96RT1-7;Q96RT1-4;V9HW13;A0A8V8TML0;Q96RT1-6;A0A8V8TP04;A0A8V8TPD2 ERBB2IP;HEL-S-78 Protein LAP2 yes no 0 0 1 7 0 1 46.009 46.097 3 0.0059151 11823 20230619_1887_Aki_TMTPro18x_K_F7 71.153 19.901 101350 74728 93551 96112 113820 116860 113620 109320 156860 116370 125640 124530 141780 115240 128530 136790 136530 131330 93601 68619 95995 95575 116640 116430 115860 112390 156000 117590 131070 125780 143540 120330 131410 136800 130510 124810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28105000 23837 1827 22373 44779 36042 36042 1 9606 Homo sapiens 0.019127229064224593 RYQEFQNR Unmodified 1139.5472 0.54720476 3786 Q01970-2;Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes no 0 0 1 7 0.816 1 1 1 30.765 30.813 3 4.2036E-05 5922 20230619_1888_Aki_TMTPro18x_K_F8 176.44 159.67 74341 68043 66382 79264 112760 121000 98190 104170 126280 74786 101880 97744 87618 75374 87245 80210 101670 84645 68731 62368 68877 79651 113100 118800 100670 106750 125890 77951 105020 97471 89887 78723 89472 80813 97017 80412 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 62563000 23838 3786 22374 44780;44781;44782 36043;36044;36045 36045 3 9606 Homo sapiens -0.01698695099116776 RYQEQLLDR Unmodified 1219.6309 0.63093439 3111 I3L4A1;Q96FZ7;I3L4G8 CHMP6 Charged multivesicular body protein 6 yes no 0 0 1 5.5 0.5 1 1 37.628 37.712 3 4.9295E-05 8566 20230619_1885_Aki_TMTPro18x_K_F5 147.41 75.084 95282 61896 71606 100040 94913 99873 94212 96957 124970 105280 117220 124680 121490 115250 97112 134490 140460 138690 87810 57021 75225 97796 96799 100900 95958 99500 125210 106590 120830 125400 122830 120150 101780 134960 133960 131690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107900000 23839 3111 22375 44783;44784 36046;36047 36046 2 9606 Homo sapiens 0.029904162779530452 RYQIEDDEDD Unmodified 1296.5106 0.51060406 4691 Q9UNS1-2;Q9UNS1;B3KMU4;B4DL70 TIMELESS Protein timeless homolog yes no 0 0 1 1 0 1 38.765 38.765 2 0.01733 9546 20230619_1880_Aki_TMTPro18x_K_F1 78.149 69.236 26324 21076 22217 24777 22174 28304 25047 27544 34111 29352 33253 38637 43356 34005 25350 36871 37830 36228 24306 19329 22929 24767 23170 28328 25374 28236 34193 29861 34610 38635 43062 35385 26844 36941 36064 34422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28271000 23840 4691 22376 44785 36048 36048 1 9606 Homo sapiens -0.12579081297008088 RYQQEVDR Unmodified 1092.5312 0.53122035 2727;1036 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;B4DS27;Q9UFW7;O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V581;Q57Z91;O60282-2;A0A7I2V352;A0A7I2YQQ7;Q59GB8 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;DKFZp566O183;KIF5C Kinesin-1 heavy chain;Kinesin-like protein;Kinesin heavy chain isoform 5C no no 0 0 1 3 0.816 1 1 1 23.143 23.239 3 0.00049992 3822 20230619_1882_Aki_TMTPro18x_K_F3 141.23 103.75 265400 156520 272370 321690 279740 358190 317740 384810 384700 286590 416720 465120 404730 375290 310750 198230 524230 480470 245030 144770 276590 311460 291450 359550 320440 388550 388810 300380 425700 460560 409360 380910 328720 218270 499210 453530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 415520000 23841 2727;1036 22377 44786;44787;44788 36049;36050 36050 2 9606 Homo sapiens -0.011344013360030658 RYSEFELLR Unmodified 1211.6299 0.62987176 3348 O95219;F8W9T3 SNX4 Sorting nexin-4 yes no 0 0 1 8 0 1 47.916 47.974 3 0.00020272 12670 20230619_1888_Aki_TMTPro18x_K_F8 120.22 85.531 61433 51845 59044 67463 53762 67303 66485 64958 70441 53056 49592 47543 56347 43692 62652 57765 52503 47056 56798 47587 60161 66831 56664 67986 66416 66226 70666 54120 52178 48418 57564 45949 63008 57246 50295 44827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31261000 23842 3348 22378 44789 36051 36051 1 9606 Homo sapiens 0.032522019090492904 RYSPDELR Unmodified 1034.5145 0.51450765 2508 B4DK20;S5FQ49;S5FZ81;S5FMB0;Q8WUB8-3;Q8WUB8-2;Q8WUB8 PHF10 PHD finger protein 10 yes no 0 0 1 4.5 0.5 1 1 33.922 33.991 3 0.011019 7132 20230619_1883_Aki_TMTPro18x_K_F4 76.827 52.672 67029 44671 65065 66839 84561 81225 73598 82441 88055 68506 78805 78525 75861 72920 77256 73176 95739 78076 61893 41107 66544 65851 85925 81069 75311 83730 88469 70316 81171 79089 77669 75379 79522 73834 91302 74170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47109000 23843 2508 22379 44790;44791 36052 36052 1 9606 Homo sapiens -0.0013690222197055846 RYSSEVATESPLDFTK Unmodified 1828.8843 0.88430813 2129 Q8WTT2;A8K905 NOC3L Nucleolar complex protein 3 homolog yes no 0 0 1 5.5 0.5 1 1 51.374 51.45 3 5.1387E-08 14522 20230619_1886_Aki_TMTPro18x_K_F6 126.07 108.72 378800 328040 353140 340180 355220 397500 373290 385550 483400 217810 210270 182300 205520 172680 296600 233790 197510 202010 350190 300420 360810 343550 369580 397420 378640 390170 474500 228550 228400 186680 214270 181680 294190 232390 189970 192190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225410000 23844 2129 22380 44792;44793 36053 36053 1 9606 Homo sapiens 0.0030213435620680684 RYTCEQAAR Unmodified 1153.5298 0.52984014 4051 Q5SQQ7;Q8IU85-2;Q8IU85 CAMK1D Calcium/calmodulin-dependent protein kinase type 1D yes no 0 0 1 5 0.816 1 1 1 23.224 23.282 3 0.0041679 3871 20230619_1886_Aki_TMTPro18x_K_F6 68.893 32.209 12916 8301.9 14882 18304 17255 20059 16256 15707 15194 11040 16411 17962 11382 14741 14832 8744.6 17228 13160 11942 7684.7 15011 17658 17705 20029 16421 16236 15564 11626 16579 17798 11976 14972 15118 9156.9 16432 12467 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18515000 23845 4051 22381 44794;44795;44796 36054 36054 1 9606 Homo sapiens -0.04078358696438045 RYTCGEAPDYDR Unmodified 1501.6256 0.62559102 3483 Q6FGJ9;P21266;Q59EJ5;A4UJ43 GSTM3 Glutathione S-transferase Mu 3 yes no 0 0 1 3 0.816 1 1 1 33.411 33.47 3 4.66E-07 7047 20230619_1881_Aki_TMTPro18x_K_F2 155.08 123.86 137570 99930 125440 139950 135890 133630 161870 143500 155560 175480 208560 226040 204750 181400 174320 234740 229050 237260 127020 91851 128680 137940 140860 135860 161500 146880 160970 177100 211420 225690 207730 191330 181160 234990 218680 225300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1081800000 23846 3483 22382 44797;44798;44799 36055;36056 36055 2 9606 Homo sapiens -0.10515675366855248 RYTIYSPK Unmodified 1026.5498 0.54983053 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRU9 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 1 4.5 0.5 1 1 41.434 41.498 3 0.034444 10165 20230619_1885_Aki_TMTPro18x_K_F5 63.216 27.771 570680 394560 436130 521120 605750 770000 567250 568800 826500 139070 151230 126010 155220 129730 234600 154410 152850 122350 526150 362510 457420 518740 616410 754590 581500 583500 798150 164760 187100 129180 162330 134980 232190 153260 146830 116660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199400000 23847 1603 22383 44800;44801 36057 36057 1 9606 Homo sapiens 0.037617603058379245 RYWEEETVPTTAGASPGPPR Unmodified 2200.0549 0.054895702 2133 B0UZZ8;A8K9A1;O15213;A8K806 C6orf11;WDR46 WD repeat-containing protein 46 yes no 0 0 1 5 0 2 45.783 45.86 3 6.687700000000001E-24 12019 20230619_1885_Aki_TMTPro18x_K_F5 193.85 183.08 24988 22702 25910 26645 19944 23950 26207 26424 25740 33607 34995 28927 32058 25098 31009 31767 34299 30544 23129 20811 26161 26560 21361 24482 26068 27016 26642 33415 35302 29463 32744 26383 31735 31747 32759 29037 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80150000 23848 2133 22384 44802;44803 36058;36059 36058 2 9606 Homo sapiens 0.0028704500768981234 RYYSIDDNQNK Unmodified 1414.6477 0.64770667 2439 Q8NI08;Q8NI08-2;B3KXK4;H0UI55;Q8N3C8;Q86TE3;Q5TF96;Q5TF97;Q8NI08-4;Q8NI08-3 NCOA7;DKFZp761B2210;DKFZp451P0217 Nuclear receptor coactivator 7 yes no 0 0 1 6.5 0.5 1 1 39.065 39.138 3 2.1056E-09 9196 20230619_1886_Aki_TMTPro18x_K_F6 187.35 160.02 97537 79903 100170 121700 86390 85574 114630 120990 122060 136480 155610 165160 161170 144180 142100 172180 192550 178470 90210 73481 101450 118960 91477 90075 114240 121610 125290 137890 158370 165680 163500 150850 147770 172840 183650 169500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129360000 23849 2439 22385 44804;44805 36060;36061 36060 2 9606 Homo sapiens -0.04303127626758396 SAADSISESVPVGPK Unmodified 1442.7253 0.72528829 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 5.5 0.5 1 1 49.969 50.046 3 5.6727E-08 13746 20230619_1885_Aki_TMTPro18x_K_F5 136.99 124.15 90645 76646 86905 93697 92884 108540 97557 101480 109400 110600 116350 116050 125200 108970 114410 133080 120980 122740 83806 70306 88730 93417 96196 108450 98491 104380 111090 111460 119440 117370 127000 113880 117000 132720 115700 116680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 584340000 23850 1213 22386 44806;44807 36062 36062 1 9606 Homo sapiens 0.021634655187426688 SAAEAGGVFHR Acetyl (Protein N-term) 1142.5469 0.54687041 4415 Q9BRF8-3;Q9BRF8-2;Q9BRF8 CPPED1 Serine/threonine-protein phosphatase CPPED1 yes no 1 0 0 2 0 1 38.061 38.125 2 3.613E-12 8947 20230619_1881_Aki_TMTPro18x_K_F2 135.83 114.68 29630 20595 24680 30543 29889 30980 29321 36401 47406 35611 41461 45581 43385 38548 36399 48179 56925 51421 27334 18946 25592 30022 30651 31410 30161 36775 46991 36351 42915 45593 43927 40494 38330 48405 54229 48826 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59143000 23851 4415 22387 44808 36063 36063 1 9606 Homo sapiens -0.01870114818939328 SAAEMYGSSFDLDYDFQR Oxidation (M) 2116.8684 0.86840006 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;P07910-4;G3V5X6;G3V3K6;G3V251;G3V2D6 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 1 0 3 0.816 1 1 1 59.792 59.806 3 3.7621E-20 18233 20230619_1883_Aki_TMTPro18x_K_F4 193.56 185.2 41652 33373 42845 44145 40742 43201 44115 43472 48002 42916 48560 43803 48174 38738 46645 48584 49693 49205 38518 30643 43396 43685 42557 43765 44421 44390 48686 43435 49753 44290 49092 40660 47638 48694 47513 46731 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85167000 23852 2226 22388 44809;44810;44811 36064;36065 36065 1388 2 9606 Homo sapiens -0.14535939942925324 SAAEMYGSSFDLDYDFQR Unmodified 2100.8735 0.87348544 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;P07910-4;G3V5X6;G3V3K6;G3V251;G3V2D6 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 0 4.5 0.5 1 1 61.948 61.974 3 6.909599999999999E-19 19157 20230619_1883_Aki_TMTPro18x_K_F4 183.76 170.97 22354 16259 15955 24796 20331 23305 25600 25726 30650 26009 24666 25927 30673 29370 22875 29567 27772 34209 20606 14960 16865 24298 20940 23721 25646 26125 30695 26282 25854 26443 30772 30189 23707 29949 26569 32419 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309000000 23853 2226 22388 44812;44813 36066 36066 1 9606 Homo sapiens -0.1329163608033923 SAAEPVASTPASR Unmodified 1242.6204 0.62042929 2398 Q5U045;Q53EZ1;B3KRV2;P49674;H0Y5S9;H0Y682 CSNK1E Casein kinase I isoform epsilon yes no 0 0 0 3.5 0.5 1 1 33.446 33.505 2 1.5037E-16 6907 20230619_1883_Aki_TMTPro18x_K_F4 218.07 188.26 30886 19966 32689 33852 38976 47467 32892 33764 39579 36514 51646 50408 54532 41444 37682 27364 55478 42723 28536 18406 33159 33189 39865 46617 33746 35515 40404 37195 52511 50206 54731 42339 39528 28630 52821 40463 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40516000 23854 2398 22389 44814;44815 36067;36068 36068 2 9606 Homo sapiens 0.008823888328151952 SAAETVTK Unmodified 805.41815 0.41814765 1453;4826 A0A384N6A4;P61604;Q9UNM1;B8ZZL8;S4R3N1 HSPE1;EPFP1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial no no 0 0 0 4.5 0.5 2 2 36.702 36.77 2;3 0.015339 8182 20230619_1885_Aki_TMTPro18x_K_F5 102.51 45.466 60252 33809 80925 77474 135810 108680 93452 121430 94338 62880 97082 103600 83957 74676 101580 39959 104550 82741 55762 31339 81235 75010 135190 107820 96792 121500 96069 67902 98995 102280 86955 76166 102790 43329 99851 78215 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 177540000 23855 1453;4826 22390 44816;44817;44818;44819 36069;36070 36070 2 9606 Homo sapiens 0.0076553021809786514 SAALPIFSSFVSNWDEATK Unmodified 2069.0106 0.010571271 3325 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 0 2.5 0.5 1 1 65.935 65.956 3 3.4389E-49 21178 20230619_1881_Aki_TMTPro18x_K_F2 269.87 238.91 99549 68102 75544 102290 66780 104990 85177 96079 92338 129480 104120 105670 150350 117680 72939 179090 143530 166170 91772 62664 78801 100440 70867 105640 85091 99629 94378 128300 108210 108870 148300 124310 80024 177900 136810 157880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 216820000 23856 3325 22391 44820;44821 36071;36072 36071 2 9606 Homo sapiens 0.018826408615495893 SAALPIFSSFVSNWDEATKR Unmodified 2225.1117 0.1116823 3325 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 1 4 0 1 64.173 64.181 3 7.9913E-30 20086 20230619_1883_Aki_TMTPro18x_K_F4 207.43 193.97 39979 52569 57109 44056 50241 34395 55556 48344 27510 47150 35076 23886 32656 17574 51549 30639 22563 17701 37239 48007 56381 45169 52575 35949 54877 48408 30028 46928 35516 25106 34194 19077 50370 29926 21834 16967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30774000 23857 3325 22392 44822 36073 36073 1 9606 Homo sapiens 0.0481309256424538 SAALQSTQSQEEFKLEDLK Unmodified 2151.0695 0.069542713 2697 B7ZW30;B7Z7D5;Q96BJ3-3;Q96BJ3 AIDA Axin interactor, dorsalization-associated protein yes no 0 0 1 5.5 0.5 1 1 55.21 55.281 4 5.8027E-10 16150 20230619_1886_Aki_TMTPro18x_K_F6 131.11 108.68 51585 48188 52867 56427 52900 61029 57880 58287 91648 54384 52969 45805 53302 51061 51861 53694 45528 48830 47752 44168 53623 56377 55160 61301 59084 59630 89793 55012 56126 47100 54369 52614 52424 53649 43645 46418 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182360000 23858 2697 22393 44823;44824 36074 36074 1 9606 Homo sapiens 0.0400507236518024 SAALQVTK Unmodified 816.47052 0.47051757 1087 A0A0S2Z470;Q96FT4;A0A0S2Z456;Q92733;A0A0S2Z483 PRCC Proline-rich protein PRCC yes no 0 0 0 1 0 1 43.181 43.181 2 0.066942 11494 20230619_1880_Aki_TMTPro18x_K_F1 71.425 29.851 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23859 1087 22394 44825 36075 36075 1 9606 Homo sapiens 0.05494113351710439 SAAMLGNSEDHTALSR Unmodified 1658.7682 0.76823251 2353 Q53GG3;B3KN57;B3KML1;O60749;O60749-2 SNX2 Sorting nexin-2 yes no 0 0 0 4 0 1 39.763 39.805 3 2.9793E-07 9480 20230619_1883_Aki_TMTPro18x_K_F4 102.03 75.321 24671 21024 24092 26483 31840 33233 26275 31337 39141 26266 36342 43225 37172 32960 33725 33794 39418 44595 22814 19290 24647 26381 32322 33051 27223 32001 38985 27353 37495 42749 37762 34378 34670 34552 37696 42223 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37498000 23860 2353 22395 44826 36076 36076 1 9606 Homo sapiens -0.03480087695470502 SAAMLGNSEDHTALSR Oxidation (M) 1674.7631 0.76314713 2353 Q53GG3;B3KN57;B3KML1;O60749;O60749-2 SNX2 Sorting nexin-2 yes no 0 1 0 4 0 1 35.838 35.886 3 0.016115 7885 20230619_1883_Aki_TMTPro18x_K_F4 56.746 52.265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23861 2353 22395 44827 36077 36077 1461 1 9606 Homo sapiens -0.04724391558079333 SAAMTLNER Oxidation (M) 1007.4706 0.47059393 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 1 0 4 0.816 1 1 1 32.522 32.594 2 0.0027924 6547 20230619_1882_Aki_TMTPro18x_K_F3 96.624 72.773 117860 94518 118380 115240 171060 163270 146330 150260 178650 125560 148840 150540 130210 118500 147350 127170 162100 130300 108970 86714 120950 115320 172680 161210 149950 153700 178820 129070 153350 150610 134390 123700 150220 127920 154730 123840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 105550000 23862 4629 22396 44828;44829;44830 36078;36079;36080 36078 2834 3 9606 Homo sapiens -0.03284254710592904 SAAPSTLDSSSTAPAQLGK Unmodified 1787.8901 0.89012178 4014 Q549N5;Q9Y5M8;H7C4H2 SRPRB Signal recognition particle receptor subunit beta yes no 0 0 0 6.5 0.5 1 1 47.403 47.487 3 1.2697E-24 12813 20230619_1886_Aki_TMTPro18x_K_F6 199.58 173.62 118470 91327 126750 123580 128840 147830 140760 141900 192380 141410 140310 139200 147120 120960 142550 165480 169230 157730 109570 83891 128100 122470 134090 147460 142800 145340 190850 142990 146710 140860 149760 127740 146630 165070 161580 149940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 603640000 23863 4014 22397 44831;44832 36081;36082;36083 36082 3 9606 Homo sapiens 0.027692328679222555 SAAQLSLSSR Unmodified 1018.5407 0.5407224 1674 A0A7I2V5T7;B3KPZ2;Q9H7Z7;A0A7I2V5X6;A0A7I2YQ70;A0A7I2V308 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes no 0 0 0 4.5 3.5 1 1 40.05 40.044 2 0.00038544 9521 20230619_1888_Aki_TMTPro18x_K_F8 128.35 102.77 157670 125650 154880 157780 194270 233650 189130 197620 254510 137760 170770 141620 146550 131740 184730 163990 199130 134730 145740 115310 158210 157670 198810 229590 192950 202690 251800 142820 177970 143500 152280 137840 187830 162740 189940 128520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116730000 23864 1674 22398 44833;44834 36084;36085 36085 2 9606 Homo sapiens 0.032193669495200083 SAAQQSTWR Unmodified 1033.4941 0.49410656 4556 Q9NP58-4;Q9NP58;A0A6B9LUM2 ABCB6 ATP-binding cassette sub-family B member 6, mitochondrial yes no 0 0 0 6 0.816 1 1 1 33.259 33.329 2 0.04 7017 20230619_1886_Aki_TMTPro18x_K_F6 68.893 43.156 15346 10816 15451 16541 19643 19852 18408 19923 21988 13575 17532 22295 15947 15749 21559 13830 28596 19264 14179 9952.8 15755 16271 20027 19820 18743 20178 21989 14334 18173 21997 16622 16350 22163 14260 27227 18273 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 24587000 23865 4556 22399 44835;44836;44837 36086 36086 1 9606 Homo sapiens -0.02130072881777778 SAATLITHPFHVITLR Unmodified 1776.0046 0.004638453 3996 Q53G34;Q9Y6C9;E9PIE4 MTCH2 Mitochondrial carrier homolog 2 yes no 0 0 0 6.5 0.5 1 1 53.389 53.461 4 2.3139E-42 15121 20230619_1887_Aki_TMTPro18x_K_F7 271.2 241.86 80700 72472 93340 100890 75672 86308 98243 93437 93598 97536 104420 100400 105730 102070 97387 103760 109930 114890 74764 66554 93556 99350 80553 88524 97644 95126 96054 98432 106670 101870 107560 105290 99905 104860 105090 108990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1940299999.9999998 23866 3996 22400 44838;44839 36087;36088 36088 2 9606 Homo sapiens 0.14767631931158576 SAATSGAGSTTSGVVSGSLGSR Unmodified 1895.9185 0.9184618 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 4.5 3.5 1 1 41.038 41.034 3 1.4408E-30 10518 20230619_1880_Aki_TMTPro18x_K_F1 198.83 182.71 41008 28074 40497 44430 41851 50991 44527 46514 59822 51741 55949 61749 60532 49587 55658 58977 64765 64554 37876 25849 41230 43583 43500 50926 45219 47967 59902 52332 57823 61804 61400 52058 57201 59419 61877 61255 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 261720000 23867 594 22401 44840;44841 36089;36090 36089 2 9606 Homo sapiens 0.0063393077716682456 SACGNCYLGDAFR Unmodified 1489.6078 0.60783246 4103 Q6FI81-3;Q6FI81;Q6FI81-2 CIAPIN1 Anamorsin yes no 0 0 0 7 0 1 49.068 49.153 2 1.7047E-27 13191 20230619_1887_Aki_TMTPro18x_K_F7 250.51 224.57 99265 76718 89597 98775 91150 114100 103430 101000 108170 118390 116650 103380 122090 102890 102530 143980 118910 111100 91681 70433 91918 98117 95006 113880 103740 104550 110330 118260 119420 105730 123510 108290 105740 142060 113560 105900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 263710000 23868 4103 22402 44842 36091 36091 1 9606 Homo sapiens -0.11738713893373642 SACGVCPGR Unmodified 962.40622 0.40621953 1905 P49207;A1LUY1 RPL34 60S ribosomal protein L34 yes no 0 0 0 5 1.41 1 1 1 1 1 30.134 30.204 2 0.0018255 5760 20230619_1885_Aki_TMTPro18x_K_F5 112.17 69.145 62443 28761 73735 63780 94692 106010 74138 96696 81911 53634 35751 41411 87124 49825 44460 42011 106320 90013 57668 26676 74211 62040 96137 103680 76235 98152 81219 56189 41110 42866 85190 50931 49332 45017 101020 85046 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 269310000 23869 1905 22403 44843;44844;44845;44846;44847 36092;36093;36094;36095;36096 36094 5 9606 Homo sapiens -0.07648733068390356 SACQVTAGGSSQCYR Unmodified 1630.6828 0.68278832 4693 Q9UNY4-2;Q9UNY4 TTF2 Transcription termination factor 2 yes no 0 0 0 7 0 1 34.56 34.636 3 1.5227E-07 7180 20230619_1887_Aki_TMTPro18x_K_F7 105.14 91.107 6836.5 4633.2 7305.8 7132 7356.9 7227.3 6507.6 7672.4 7912.8 9754 8890.4 8430.7 9444.6 6506.8 8103.9 7867.3 10006 7942.1 6318.3 4264.7 7379.5 6997.5 7608.8 7311.3 6662.1 7858.4 8033.6 9699.8 9095.2 8548.9 9548.4 6856.3 8366.6 7889.8 9540.8 7550.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21565000 23870 4693 22404 44848 36097 36097 1 9606 Homo sapiens -0.10732576152759066 SADDAGCQLQELR Unmodified 1461.6518 0.65180577 1915 B4DHJ4;A2RU29;Q4VBZ9;Q14149 MORC3 MORC family CW-type zinc finger protein 3 yes no 0 0 0 2 0 1 44.016 44.098 2 4.8694E-15 11751 20230619_1881_Aki_TMTPro18x_K_F2 200.82 177.58 25072 22421 24931 28222 31005 27774 27459 27024 28165 30560 34881 32663 31068 27647 29143 35253 39793 38785 23195 20568 25438 28016 31574 28123 27924 27763 28933 30751 35290 32910 31755 29086 30289 35481 37963 36805 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26849000 23871 1915 22405 44849 36098 36098 1 9606 Homo sapiens -0.06055406195355317 SADEGQTVFYTCTNCK Unmodified 1879.7717 0.77166291 1306 A0A1U9X8Y8;Q2L6J2;Q9P1U0 ZNRD1 DNA-directed RNA polymerase subunit;DNA-directed RNA polymerase I subunit RPA12 yes no 0 0 0 5 0 1 48.619 48.695 3 4.1834E-08 13170 20230619_1885_Aki_TMTPro18x_K_F5 127.18 117.08 32759 26019 30353 29899 32623 36309 34661 30446 34789 36749 37261 33551 38190 31475 37361 38483 38081 34793 30267 23858 31066 29966 33762 36102 34832 31685 35551 36710 38137 34150 38899 32910 38051 38354 36406 33098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61177000 23872 1306 22406 44850 36099 36099 1 9606 Homo sapiens -0.133032057037326 SADEPMTTFVVCNECGNR Unmodified 2085.8554 0.85540931 1319 P23193;A0A384MTX4;A0A1W2PPZ5;B7Z4W0;P23193-2;A0A1W2PRL9;B7Z4S1 TCEA1 Transcription elongation factor A protein 1 yes no 0 0 0 3 0.816 1 1 1 52.045 52.087 3 1.9974E-30 15050 20230619_1882_Aki_TMTPro18x_K_F3 229.68 222.62 78228 71249 72016 80707 74049 83264 88816 79083 94129 92512 86234 86823 88469 82189 94515 101090 98233 112910 72339 65290 73767 80774 77166 83929 88832 81474 95302 92620 88984 88250 90568 85935 96250 101920 94055 107060 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 521820000 23873 1319 22407 44851;44852;44853 36100;36101;36102 36101 3 9606 Homo sapiens -0.14408417598360757 SADESGQALLAAGHYASDEVR Unmodified 2145.9927 0.99268938 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 3 0.816 1 1 1 50.622 50.673 3 4.1228E-23 14397 20230619_1882_Aki_TMTPro18x_K_F3 188.35 171.94 205850 175200 186080 188610 204370 281880 242670 241750 323240 155660 144070 140370 165440 117230 170910 167910 149730 155710 190240 160510 191060 190650 212480 276900 244750 247360 317070 161820 157200 142540 168340 124490 172520 167250 143510 148000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 888590000 23874 1022;3868 22408 44854;44855;44856 36103;36104 36103 2 9606 Homo sapiens -0.0344672613127841 SADFNPDFVFTEK Unmodified 1515.6882 0.6881745 2338 B7Z6D5;B3GQE6;Q96GQ7;Q3MI07;A0A087WYH5 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 0 0 4.5 0.5 1 1 61.962 61.989 3 1.3481E-05 19159 20230619_1883_Aki_TMTPro18x_K_F4 119.79 97.472 243210 189080 222750 245480 237230 300430 269700 267850 298930 297000 265610 272910 311040 260730 281360 341300 317280 337510 224670 173600 228400 243930 246500 298750 270930 276620 301720 297910 276150 277800 314630 273670 288950 341270 303370 320530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 296380000 23875 2338 22409 44857;44858 36105;36106 36105 2 9606 Homo sapiens -0.04904206027026703 SADFSQSTSIGIK Unmodified 1339.662 0.66195975 1634 F8W7R3;B3KNW8;A0A6Q8PGF4;B7ZMF2;A0A6Q8PH09;Q9NVI1-2;Q9NVI1-1;Q9NVI1;H3BP78;A0A8Q3SIZ6;A0A8Q3SIW9 FANCI Fanconi anemia group I protein yes no 0 0 0 7.5 0.5 1 1 51.142 51.219 3 0.0062569 14065 20230619_1888_Aki_TMTPro18x_K_F8 69.352 45.061 73315 67716 81007 78035 78840 91290 88103 79800 104780 89240 84986 85172 116330 77355 89097 100870 151920 87015 67906 62060 81609 78154 82340 91051 88793 82590 105020 89612 89484 86406 116380 81380 94572 100180 144300 83032 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89124000 23876 1634 22410 44859;44860 36107 36107 1 9606 Homo sapiens 0.0057152480153490615 SADGAEADGSTQVTVEEPVQQPSVVDR Acetyl (Protein N-term) 2812.2999 0.29988959 1189 A0A140VJN8;O60664-4;O60664-3;O60664;K7EJD0 PLIN3 Perilipin-3 yes no 1 0 0 1 0 1 52.329 52.329 3 2.0887E-38 15313 20230619_1880_Aki_TMTPro18x_K_F1 123.29 119.13 7803.3 6665.9 8008.8 10150 7706.2 8556.7 7756.7 9237.6 9695.2 9080.7 6671.6 8725.5 8980.6 7768.3 6803.4 8939.4 10373 12590 7219.1 6129.2 8125.7 9936.8 8032.7 8785.4 7882.8 9385.7 9655.3 9174.1 7100.9 8832.6 8995.8 8114.1 7165.4 9160.2 9905.4 11912 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62554000 23877 1189 22411 44861 36108 36108 1 9606 Homo sapiens -0.03376835621384089 SADGSAPAGEGEGVTLQR Unmodified 1700.7966 0.79655575 3781 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 yes yes 0 0 0 1.5 0.5 1 1 39.697 39.732 2 2.0411E-38 9665 20230619_1881_Aki_TMTPro18x_K_F2 324.94 292.61 38982 28296 30947 34903 28759 28894 26154 28554 39129 50702 54584 74632 59050 52314 62586 70054 69456 74864 35959 25973 32081 34628 30003 29686 26957 29807 39798 50749 55619 73858 60312 55611 64002 70357 66426 71036 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84691000 23878 3781 22412 44862;44863 36109;36110 36110 2 9606 Homo sapiens -0.025810665145627354 SADGVIVSGVK Unmodified 1030.5659 0.56587452 2117 A8K885;Q9UNH7;A0A0A0MRI2;B4DJS7;Q9UNH7-2;Q5QTQ6;G3V5X9 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 6.5 0.5 1 1 47.522 47.606 3 0.00033867 12868 20230619_1886_Aki_TMTPro18x_K_F6 99.343 57.895 87475 70478 90347 87284 87882 93976 96676 105010 126810 84344 98195 91779 95410 76331 99057 114110 116370 107990 80900 64668 91480 86893 91728 94774 97914 105940 126180 86633 101940 92432 97648 81252 101700 113660 111120 102670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130050000 23879 2117 22413 44864;44865 36111 36111 1 9606 Homo sapiens 0.05181421752104143 SADKIPEPK Unmodified 983.52876 0.52876073 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8YET2;A0A2R8Y7F4 PRRC2C Protein PRRC2C yes no 0 0 1 6 0 1 41.127 41.221 3 0.0054122 10064 20230619_1886_Aki_TMTPro18x_K_F6 77.379 29.441 93889 78437 110650 99724 122570 116100 123240 111300 122670 117650 133820 95633 99222 72494 126080 57224 89039 54861 86956 71981 111100 99207 126160 116090 124210 114220 125400 117880 135060 97295 103490 74809 125290 57877 85314 52258 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35716000 23880 2894 22414 44866 36112 36112 1 9606 Homo sapiens 0.036337502063247484 SADLPAIISTWQELR Unmodified 1698.8941 0.89408495 2506 B4DJP6;M0R2H5;B4DJM9;M0QWZ7;Q9NP81;Q9NP81-2 SARS2 Serine--tRNA ligase, mitochondrial yes no 0 0 0 8 0 1 64.51 64.531 3 0.00049155 19742 20230619_1888_Aki_TMTPro18x_K_F8 93.51 72.847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23881 2506 22415 44867 36113 36113 1 9606 Homo sapiens 0.07259367152278173 SADTLWDIQK Unmodified 1175.5823 0.58225287 1577 P07195;Q5U077;A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 5 0.816 1 1 1 57.175 57.22 3 4.2397E-05 16922 20230619_1886_Aki_TMTPro18x_K_F6 140.45 97.164 948830 847200 867940 796580 839580 1687900 905500 927720 1850000 812770 714350 768830 919720 803220 841870 953340 974090 937780 877230 775190 888460 820270 884450 1620000 937390 996480 1782800 829670 795440 783890 929400 835340 865300 954440 930470 891000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5038600000 23882 1577 22416 44868;44869;44870 36114;36115 36115 2 9606 Homo sapiens 0.0014850291818220285 SADTLWGIQK Unmodified 1117.5768 0.57677356 3370 V9HWB9;P00338;P00338-3;B4DJI1;P00338-4 HEL-S-133P;LDHA L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 8 0 1 56.026 56.088 3 0.0025056 16194 20230619_1888_Aki_TMTPro18x_K_F8 81.338 54.665 61997 52510 50948 67451 52951 86213 60086 71424 80356 46327 46101 42822 47443 41487 56172 53585 53326 48767 57255 48190 52838 67091 55321 85321 60796 73285 79239 48135 48971 43642 48819 43471 56792 53396 51018 46387 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51585000 23883 3370 22417 44871 36116 36116 1 9606 Homo sapiens 0.022688241263495 SAEAFGK Unmodified 708.34425 0.34425443 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 6 0 1 41.779 41.873 2 0.0042033 10304 20230619_1886_Aki_TMTPro18x_K_F6 117.93 60.831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23884 2263 22418 44872 36117 36117 1 9606 Homo sapiens -0.021583931535701595 SAECIDEAAER Unmodified 1249.5245 0.52447999 4215 Q8IYS1 PM20D2 Peptidase M20 domain-containing protein 2 yes yes 0 0 0 1 0 1 37.382 37.382 2 7.2986E-12 8952 20230619_1880_Aki_TMTPro18x_K_F1 200.71 181.61 112990 81121 104360 94591 102080 103210 88962 88244 112110 120870 157520 130980 133180 129270 122930 162560 189130 153770 104330 74424 106600 94573 105850 103430 91274 92074 114690 120740 158200 132630 136380 135070 129040 162210 180070 146280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123110000 23885 4215 22419 44873 36118 36118 1 9606 Homo sapiens -0.09030127069559057 SAEDELAMR Unmodified 1020.4546 0.45460951 1922 A3KFL5;Q13868;B4E001;A0A8I5KV47;A0A8I5KVY3;A3KFL2;Q13868-3;Q13868-2;A0A8I5QL34;B3KQW2 EXOSC2 Exosome complex component RRP4 yes no 0 0 0 1 0 1 40.992 40.992 2 0.0030215 10539 20230619_1880_Aki_TMTPro18x_K_F1 100.98 79.302 59911 40692 52458 54905 63455 64672 56878 59328 73157 61093 76874 87045 78858 71869 64559 75084 98340 92332 55282 37397 54075 54398 64870 64537 58250 61032 73712 62461 78832 86651 79809 74790 67815 76337 93723 87536 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32052000 23886 1922 22420 44874 36119 36119 1 9606 Homo sapiens -0.054799609475026045 SAEFLLHMLK Oxidation (M) 1203.6322 0.63217995 188 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;P18621-3;J3KRB3;A0A087WWH0;J3QS96;J3QLC8;A0A0A0MRF8;P18621-2;A0A087WY81 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 yes no 0 1 0 1.5 0.5 1 1 55.671 55.681 3 0.00044968 17023 20230619_1881_Aki_TMTPro18x_K_F2 97.456 71.414 186170 163820 166960 178100 249490 281570 206260 214110 297150 68063 80559 79376 72412 63098 147600 73887 69434 66967 172080 150080 172510 180030 251730 275300 213090 219430 288220 77458 92627 79662 77782 66163 144050 73940 67172 63688 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 444930000 23887 188 22421 44875;44876 36120;36121 36121 120 2 9606 Homo sapiens 0.03850914322470089 SAEFLLHMLK Unmodified 1187.6373 0.63726532 188 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;P18621-3;J3KRB3;A0A087WWH0;J3QS96;J3QLC8;A0A0A0MRF8;P18621-2;A0A087WY81 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 yes no 0 0 0 3 0 1 62.003 62.033 3 0.00032496 19248 20230619_1882_Aki_TMTPro18x_K_F3 111.65 75.127 404060 379630 340490 284290 459960 572070 396590 405450 563050 48322 62271 73676 65834 0 163930 82972 68351 0 373490 346760 352680 299140 467630 552900 408300 415960 542570 69805 87891 71520 71546 0 159220 77670 65849 0 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 0 583870000 23888 188 22421 44877 36122 36122 1 9606 Homo sapiens 0.050952181851016576 SAEIDSDDTGGSAAQK Unmodified 1550.6696 0.6696239 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;B4DS27 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 1.5 0.5 1 1 39.654 39.689 3 9.0697E-07 9679 20230619_1881_Aki_TMTPro18x_K_F2 119.77 101.36 43773 32525 49892 49893 60371 70218 62771 62261 67362 53390 72235 70657 65066 63733 63571 46244 73251 83144 40499 29925 50344 49202 61948 69238 63294 63911 68482 54990 73564 70692 66620 65059 65107 48877 70061 78543 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72954000 23889 2727 22422 44878;44879 36123 36123 1 9606 Homo sapiens -0.08368412459481078 SAENPPSGSVR Unmodified 1099.5258 0.52580062 2434 B4DXQ8;B3KWX6;Q53EY5;B3KX14;Q15014;Q5JXX1;Q5JXX2 MORF4L2 Mortality factor 4-like protein 2 yes no 0 0 0 3 0 1 29.896 29.99 2 0.086278 5576 20230619_1882_Aki_TMTPro18x_K_F3 67.726 47.205 7128.4 4789.8 12265 10270 10926 12771 11427 9642.2 9524.9 8889.5 12080 12006 12373 11463 10784 4343.5 11025 12151 6623.4 4430.7 12001 9945.6 11452 12641 11440 10055 9908.2 9123.7 12287 12014 12545 11473 10970 4940.1 10554 11454 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4325200 23890 2434 22423 44880 36124 36124 1 9606 Homo sapiens -0.0199812491848661 SAESMSDGVGSFLPGK Unmodified 1567.7188 0.7188227 4696 Q9UQC2-2;Q9UQC2 GAB2 GRB2-associated-binding protein 2 yes no 0 0 0 7 0 1 58.027 58.079 3 1.1162E-07 17026 20230619_1887_Aki_TMTPro18x_K_F7 121.24 108.86 42949 39287 46324 44985 37407 37992 42579 41129 46809 48290 49653 48325 47659 45146 53340 48220 50442 48984 39769 36005 46625 44896 39664 39047 42790 42012 47570 48418 50733 48945 49000 46818 53951 48475 48280 46523 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34133000 23891 4696 22424 44881 36125 36125 1 9606 Homo sapiens -0.04232795704274395 SAESPTSPVTSETGSTFK Unmodified 1811.8425 0.84250289 3790 Q02952-3;Q02952-2;Q02952;Q86TJ9 AKAP12 A-kinase anchor protein 12 yes no 0 0 0 4.5 0.5 1 1 47.111 47.17 3 1.1944E-18 12545 20230619_1885_Aki_TMTPro18x_K_F5 176.08 164.64 36006 27334 31105 38780 26277 34217 26155 29439 38875 43938 35630 53309 43276 36281 45277 54244 52779 63825 33241 25124 31975 38138 27755 34821 26795 30808 38810 43898 37175 53052 44034 38948 46473 54719 50502 60479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221320000 23892 3790 22425 44882;44883 36126 36126 1 9606 Homo sapiens -0.03094466122979611 SAEVETSEGVDESEK Acetyl (Protein N-term) 1636.6952 0.69516995 3103 I3L159;I3L1F5;Q6IBP2;Q6FHB5;Q53HF1;P30519;B3KSE0;I3L276;I3L4P8;A0A1B0GXH0;I3L463 HMOX2 Heme oxygenase 2 yes no 1 0 0 1 0 1 45.523 45.523 2 5.448200000000001E-25 12504 20230619_1880_Aki_TMTPro18x_K_F1 138.71 124.02 25626 21186 22847 26802 26521 27657 31145 25542 32342 30947 31968 34131 35472 28785 29503 39389 37915 42761 23676 19441 23522 26610 27369 27860 31153 26407 32868 31088 32983 34329 35809 30441 30627 39565 36229 40561 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62404000 23893 3103 22426 44884 36127 36127 1 9606 Homo sapiens -0.09770982727741284 SAEVPEAASAEEQK Acetyl (Protein N-term) 1486.6787 0.67873203 358 H3BQ52;A0A024R5U3;H3BMD8;P56211 ARPP19;ARPP-19 cAMP-regulated phosphoprotein 19 yes no 1 0 0 1 0 1 46.511 46.511 2 2.0857E-11 12888 20230619_1880_Aki_TMTPro18x_K_F1 116.77 102.97 61946 55221 52180 62345 58784 59876 55588 60023 73121 77733 88857 85982 83555 68653 67592 95083 92902 93703 57237 50605 53965 62352 60469 60775 56808 61785 74139 77846 90142 86363 84688 72790 70565 94958 88649 89011 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 452870000 23894 358 22427 44885 36128 36128 1 9606 Homo sapiens -0.04514019103180544 SAFAPFGK Unmodified 823.42284 0.4228391 2070 O15187;Q2TSD2;A8K5C4;Q01085;Q01085-2;E7ETJ9;A6NKZ9;E7ETC0 TIAL1 Nucleolysin TIAR yes no 0 0 0 3 0 1 53.809 53.862 2 0.009501 15853 20230619_1882_Aki_TMTPro18x_K_F3 111.01 53.727 230320 210800 216090 227490 245760 301240 260280 251620 311100 167510 144900 112210 150710 99745 202150 186560 169040 124410 213020 193090 221260 229380 253650 297840 263010 258210 307050 172430 156670 116300 155950 107980 202720 182650 161740 118980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136290000 23895 2070 22428 44886 36129 36129 1 9606 Homo sapiens 0.004064591515202665 SAFDMFNFLASK Unmodified 1376.6435 0.64347291 1783 A0A8I5KXR3;Q03164-2;Q03164;Q03164-3;B4DIJ7 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180;Histone-lysine N-methyltransferase yes no 0 0 0 4 0 1 65.416 65.428 3 0.037863 20593 20230619_1883_Aki_TMTPro18x_K_F4 36.572 24.012 8427.2 6242.3 7451.8 8259.8 6842.9 6198.1 4971.5 7315 8749.7 8721.9 6676.2 8670.7 9778.9 7679 9404.9 9626.3 9452.4 9854.7 7780.3 5733.5 7641 8149.2 7106.8 6453.9 5248.4 7430.4 8629.6 8736.5 7097.9 8763.5 9861.2 8060.8 9573.6 9654.5 9046.3 9356.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6008000 23896 1783 22429 44887 36130 36130 1 9606 Homo sapiens -0.029783083740312577 SAFEEEGKETADITHALSK Unmodified 2061.9855 0.98547873 2723 B9A6J2;Q15042;Q15042-3;D3DP75;A0A8J9AUI2;Q15042-4;A0A8I5KRH8 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes no 0 0 1 5 0 1 52.555 52.629 4 8.3708E-05 14857 20230619_1885_Aki_TMTPro18x_K_F5 91.589 74.905 62894 54170 60694 66764 67967 98519 72032 67072 126650 76791 74526 61708 69530 53443 79214 55231 59475 48292 58158 49689 62017 66768 70435 96426 74007 70944 123690 76787 78613 63040 71538 55527 79153 55180 57019 45982 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67189000 23897 2723 22430 44888 36131 36131 1 9606 Homo sapiens -0.0030345873165060766 SAFEETGK Unmodified 867.39741 0.39741221 742 Q9BT09;A0A024RD07 CNPY3;TNRC5 Protein canopy homolog 3 yes no 0 0 0 3 0 1 41.657 41.72 2 0.0023147 10342 20230619_1882_Aki_TMTPro18x_K_F3 128.69 72.253 79908 42703 106110 112780 115440 134160 97187 107420 109430 90266 143730 164410 111560 114950 133450 58531 162220 158590 73929 39706 105780 108250 118680 133260 99541 111170 112010 94411 144620 161660 116060 117230 136480 65579 154910 149590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68466000 23898 742 22431 44889 36132 36132 1 9606 Homo sapiens -0.04159060161555317 SAFLLQNLLVGHPEHK Unmodified 1801.9839 0.98390301 4634 Q9NZL4;Q9NZL4-3 HSPBP1 Hsp70-binding protein 1 yes no 0 0 0 3 0 1 58.298 58.328 4 7.6331E-08 17767 20230619_1882_Aki_TMTPro18x_K_F3 123.03 97.706 38026 29941 36251 36952 29274 32376 35862 30641 38017 43168 40538 39695 50080 40803 38504 48453 46079 45463 35139 27474 36869 36687 31138 33056 35851 31785 38747 42853 41878 40499 50250 42468 39829 48373 44011 43215 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79581000 23899 4634 22432 44890 36133 36133 1 9606 Homo sapiens 0.11499041551473965 SAFLQAFLGR Unmodified 1108.6029 0.60292873 1821 A0A8V8TM48;Q8IXI1 RHOT2 Mitochondrial Rho GTPase 2 yes no 0 0 0 7 0 1 63.42 63.452 2 0.074611 19408 20230619_1887_Aki_TMTPro18x_K_F7 61.48 37.923 98374 111850 132670 99662 174580 130610 166400 173070 144480 103570 106060 87523 94556 82781 176650 106200 101390 95350 91447 102220 132300 102290 177110 130920 167580 171900 146820 107890 110210 89573 100730 86777 173640 105970 97698 90701 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129120000 23900 1821 22433 44891 36134 36134 1 9606 Homo sapiens 0.05297138088508291 SAFSEAALEK Acetyl (Protein N-term) 1093.5292 0.52915466 703 A0A0C4DGQ6;A0A024RC37;Q96P16;K7EQR8 RPRD1A;P15RS Regulation of nuclear pre-mRNA domain-containing protein 1A yes no 1 0 0 2 0 2 58.02 58.035 2 0.0015037 17808 20230619_1881_Aki_TMTPro18x_K_F2 56.563 25.191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23901 703 22434 44892;44893 36135;36136 36135 2 9606 Homo sapiens -0.01386874864465426 SAFSEEVNIK Unmodified 1122.5557 0.55570376 25 K7EKW9;Q6FG43;Q9BTI6;J3QLD9;A0A024QZ62;E7EMK3;Q14254 FLOT2;hCG_1998851 Flotillin-2 yes no 0 0 0 5 0 1 50.985 51.06 2 0.0063118 14207 20230619_1885_Aki_TMTPro18x_K_F5 98.033 58.324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23902 25 22435 44894 36137 36137 1 9606 Homo sapiens -0.0006718597314829822 SAFSNLFGGEPLSYTR Unmodified 1744.842 0.84204938 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;A0A8V8TLK7;A0A8V8TND0;A0A8V8TLK4;F8WBE5 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 2.67 0.471 1 2 62.566 62.589 2;3 1.9354000000000002E-25 19489 20230619_1882_Aki_TMTPro18x_K_F3 280.97 263.6 432040 386080 433330 427870 343620 404370 342520 347850 361830 509890 466600 449060 495690 411620 431870 572990 445050 529880 399730 353740 438620 428520 364200 409550 346490 363700 372500 504560 474930 457480 501810 434430 441840 570340 426280 503430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 669330000 23903 1817 22436 44895;44896;44897 36138;36139 36139 2 9606 Homo sapiens -0.0005779626146704686 SAGEEEDGPVLTDEQK Unmodified 1702.7534 0.75335353 997 Q66PJ3-7;B2RE15;A0A8C8KBE9;F8WCT1;A0A0C4DG62;Q8TEM4;H7BZV4;F5GYV5;Q66PJ3-9;Q66PJ3-10;Q66PJ3;Q66PJ3-4;Q66PJ3-3;Q66PJ3-2;Q66PJ3-1 ARL6IP4;FLJ00169 ADP-ribosylation factor-like protein 6-interacting protein 4 yes no 0 0 0 1 0 1 45.137 45.137 3 1.1818E-06 12343 20230619_1880_Aki_TMTPro18x_K_F1 126.71 107.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23904 997 22437 44898 36140 36140 1 9606 Homo sapiens -0.06991301082462087 SAGGEPGPEAGR Unmodified 1083.4945 0.49450049 1591 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A669KAV7;O95785-4;O95785-3;A0A2R8YFV2;O95785;B3KR89;O95785-2 WIZ Protein Wiz yes no 0 0 0 1 0 1 29.289 29.289 2 0.00049204 5728 20230619_1880_Aki_TMTPro18x_K_F1 105.98 92.938 7310.4 3786.6 9637 9224.6 13381 16676 8545.1 9322.6 11050 7843.6 15021 14688 11123 10246 13911 5981.7 15914 14985 6762 3515.7 9649.6 8948.9 13487 16111 8983.4 9991.5 11254 8224.7 15055 14443 11613 10496 14161 6609.4 15200 14141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7023100 23905 1591 22438 44899 36141 36141 1 9606 Homo sapiens -0.043906979525672796 SAGGIGVAVSCIR Unmodified 1245.65 0.64995528 2555 B4DNN4;Q53GZ5;P23921;B4E0I8;E9PL69;B4DXB0;B4DS95;E9PP77;H0YCY7 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 0 0 0 2 0 1 47.632 47.703 2 2.3755E-27 13360 20230619_1881_Aki_TMTPro18x_K_F2 243.91 187.48 137170 108840 111140 115220 116250 153660 134820 133040 142560 114390 100630 83376 102650 82808 95993 108620 98832 77930 126610 99730 115210 116380 121100 151960 135070 136800 143080 115730 105210 86116 104380 86806 97949 107000 94390 74420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 406650000 23906 2555 22439 44900 36142 36142 1 9606 Homo sapiens 0.036956295773279635 SAGGRPGSGPQLGTGR Unmodified 1453.7386 0.73858736 451 A8K2I7;A0A024R7I0;O14908;K7EM11;A0A024R7I1;O14908-2;K7ESN1 GIPC1 PDZ domain-containing protein GIPC1 yes no 0 0 1 3 0.816 1 1 1 29.643 29.723 3 0.00031535 5471 20230619_1883_Aki_TMTPro18x_K_F4 88.637 72.104 36621 22792 38094 40953 52014 49383 42100 46384 52200 35501 43398 39808 38671 31726 40755 40534 49707 38570 33823 21032 38787 39944 52608 49216 43344 47290 52205 36618 44714 39978 39725 33457 41893 40485 47396 36696 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 96322000 23907 451 22440 44901;44902;44903 36143;36144 36144 2 9606 Homo sapiens 0.02986761141369243 SAGPQSQLLASVIAEK Unmodified 1597.8675 0.86753585 3551 Q05DK5;P35612-4;P35612-3;P35612;P35612-2;P35612-8;P35612-9;A0A1C7CYY0;P35612-5;P35612-6;Q96HD4 ADD2 Beta-adducin yes no 0 0 0 1 0 1 61.731 61.731 3 0.00041674 19201 20230619_1880_Aki_TMTPro18x_K_F1 81.594 67.175 27217 21151 25355 29648 26978 30367 23165 23092 26443 28072 35083 30423 35445 26655 31123 32052 31383 35298 25145 19435 25956 29233 27807 30482 23700 24241 27103 28179 35568 30674 35925 27927 31745 32301 30052 33478 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55848000 23908 3551 22441 44904 36145 36145 1 9606 Homo sapiens 0.09251678260920926 SAGQGEVLVYVEDPAGHQEEAK Unmodified 2312.0921 0.092069069 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98 FLNA Filamin-A yes no 0 0 0 2.5 1.12 1 1 1 1 51 51.037 3 2.6912E-31 14885 20230619_1881_Aki_TMTPro18x_K_F2 214.92 206.97 229600 172140 204520 207110 252290 302220 254230 243930 258280 273540 289100 296390 292300 257270 295290 307170 290350 320740 212010 157950 210630 207520 258540 296990 256350 253970 264250 275570 295430 298540 298390 269280 300030 308610 278070 304390 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 680690000 23909 3484 22442 44905;44906;44907;44908 36146;36147;36148;36149;36150 36147 5 9606 Homo sapiens -0.011493282371702662 SAGSALYASR Unmodified 981.48796 0.48795855 1403 A0A804HIS0;A0A384MDS7;Q96IJ6;Q96IJ6-2;C9JAH0;F8WD54;A0A087WUI8 GMPPA Mannose-1-phosphate guanyltransferase alpha yes no 0 0 0 8 0 1 36.578 36.564 2 0.00024534 8105 20230619_1888_Aki_TMTPro18x_K_F8 135.55 102 41263 32928 33179 39192 47558 53264 43870 44516 58204 19115 22387 19269 21381 19164 31838 18950 25477 16893 38087 30203 34631 39238 48215 52583 44852 45400 56928 20769 24612 19585 22370 19752 31764 18978 24378 16098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13058000 23910 1403 22443 44909 36151 36151 1 9606 Homo sapiens -0.0035259111327832215 SAGVEQLMYIK Unmodified 1237.6377 0.63765925 3887 Q14320;B0S8I6 FAM50A Protein FAM50A yes no 0 0 0 5.67 3.3 1 2 58.865 58.886 2;3 0.019132 17322 20230619_1888_Aki_TMTPro18x_K_F8 61.435 14.147 63951 57826 67360 73159 58031 76468 70283 66717 90432 80263 79072 82991 90936 73797 75081 90359 83755 93968 59199 53049 68053 72653 61463 76821 70778 69222 90520 80513 82193 83809 91665 77328 77192 90692 80123 89176 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174780000 23911 3887 22444 44910;44911;44912 36152;36153;36154 36153 3 9606 Homo sapiens 0.028345931142894187 SAGVQCFGPTAEAAQLESSK Unmodified 2036.9473 0.94731909 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2;F8WD69;C9JBJ1;C9JTV6;C9JZG2;C9JKQ7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 5 0.816 1 1 1 54.718 54.77 3 7.0908E-30 15894 20230619_1886_Aki_TMTPro18x_K_F6 207.1 160.95 207940 160080 199590 212180 165500 221640 194010 209180 241930 283030 248570 262580 348990 268450 204950 384950 324580 330780 192140 147020 203030 210090 175780 223010 195580 216480 244380 281450 259030 267840 346080 282960 218540 381360 309440 314730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 766530000 23912 3488 22445 44913;44914;44915 36155;36156 36156 2 9606 Homo sapiens -0.02967667917982908 SAGVQCFGPTAEAAQLESSKR Unmodified 2193.0484 0.048430116 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2;F8WD69;C9JBJ1;C9JTV6;C9JZG2;C9JKQ7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 1 7.5 0.5 1 1 49.776 49.855 3 4.0531E-37 13492 20230619_1887_Aki_TMTPro18x_K_F7 233.38 218.77 130090 176010 196710 148810 204810 160470 200400 153020 120730 152810 148980 85380 111320 67816 264980 63333 64720 50365 121290 160730 194040 152960 211030 161580 199890 156940 128810 152290 149820 89195 121660 70472 254570 63669 63760 48027 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 147120000 23913 3488 22446 44916;44917 36157;36158;36159 36157 3 9606 Homo sapiens -0.0003721621528711694 SAHAGTYEVR Unmodified 1089.5203 0.52032131 3625 P51571;A6NLM8 SSR4 Translocon-associated protein subunit delta yes no 0 0 0 3 1.1 1 2 2 25.608 25.692 3 3.713E-10 3865 20230619_1883_Aki_TMTPro18x_K_F4 182.28 142.24 47983 25074 44668 53944 69557 60972 63874 62482 64785 55464 58804 67556 73244 50952 53997 50788 69835 71804 44243 23209 46069 52135 69995 61141 64736 63546 65720 56794 61294 67418 73315 53178 56097 52227 66678 67970 6 5 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 31695000 23914 3625 22447 44918;44919;44920;44921;44922 36160;36161;36162;36163;36164;36165 36162 6 9606 Homo sapiens -0.020858037102925664 SAIEGEQEQR Unmodified 1145.5313 0.53127993 4203 Q8IVL6;Q8IVL6-2 LEPREL2 Prolyl 3-hydroxylase 3 no no 0 0 0 1 0 1 31.561 31.561 2 0.00043604 6621 20230619_1880_Aki_TMTPro18x_K_F1 125.75 80.665 9365.3 4097.8 12945 11698 22028 23521 14705 17840 17749 10032 19430 23082 15438 18504 24878 7781.2 22791 23041 8662.1 3821.5 12980 11326 21955 22737 15355 18396 17942 10969 19725 22662 16365 18660 24920 8904 21828 21722 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9747400 23915 4203 22448 44923 36166 36166 1 9606 Homo sapiens -0.03566446126660594 SAIGEGMTR Oxidation (M) 936.43348 0.43348014 1233 A0A140VK65;P21281;B4DFM5;B4DQI9;Q71UA2;B4DWH7;C9JL73;P15313;C9JZ02 ATP6V1B2;ATP6B1;ATP6V1B1 V-type proton ATPase subunit B, brain isoform;V-type proton ATPase subunit B, kidney isoform yes no 0 1 0 3 0.816 1 1 1 30.328 30.403 2 0.024171 5731 20230619_1882_Aki_TMTPro18x_K_F3 70.256 52.87 49510 32460 40743 43607 48502 45898 45759 52916 56142 50845 63658 61289 60597 49360 60438 55342 74734 65526 45656 29836 42238 43157 49670 46410 46645 53498 56878 51804 64812 61357 61932 51646 62215 56105 71303 62163 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 121700000 23916 1233 22449 44924;44925;44926 36167;36168 36168 774 2 9606 Homo sapiens -0.03727926256340197 SAIIQNVEK Unmodified 1000.5553 0.55530983 3477 P19174;P19174-2;Q4LE43;B4DMA3;Q9UFY1 PLCG1;PLCG1 variant protein;DKFZp434N101 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1;Phosphoinositide phospholipase C yes no 0 0 0 6.5 0.5 1 1 47.204 47.289 3 0.023877 12344 20230619_1887_Aki_TMTPro18x_K_F7 61.56 28.667 140930 107510 139230 145600 155830 177340 160020 140330 181710 148340 176170 193470 176240 160030 160830 194350 200380 201600 130240 98764 141870 144270 160720 176030 161740 146230 183540 150960 181130 193240 179250 167910 166180 195060 191350 191400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 89464000 23917 3477 22450 44927;44928 36169;36170 36170 2 9606 Homo sapiens 0.05505439097657927 SAILQENSTLSASNK Unmodified 1561.7948 0.79476484 3052 Q498Y2;H0YKU8;Q6JHV3;H0YMI4;Q9Y6I4;B4DWJ6;Q9Y2R8;B3KMX7;H0YLB7;Q9Y6I4-2 USP3 Ubiquitinyl hydrolase 1;Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 0 0 0 7 0 1 48.43 48.517 3 2.9009E-05 12969 20230619_1887_Aki_TMTPro18x_K_F7 97.797 81.053 99416 70565 86651 108830 108670 114040 113860 120900 143730 114450 132370 128140 161520 115010 110590 157660 159180 127190 91754 64941 89552 106760 111300 115040 115400 122850 144200 116470 137520 129150 161410 121360 116280 155910 151610 121250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170640000 23918 3052 22451 44929 36171 36171 1 9606 Homo sapiens 0.036339244675446025 SAILVPSEK Unmodified 942.5386 0.53859714 275;1599 A0A024R3Z1;A0A024R3Y8;P11137-4;A0A669KB77;P11137-3;P11137;A8K5Y1;A0A024R409;Q59FX9;P11137-2 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 0 6.5 0.5 1 1 48.586 48.669 2 7.7555E-05 12965 20230619_1887_Aki_TMTPro18x_K_F7 159.28 112.85 169750 136470 131870 135230 109540 130600 162270 146900 182710 196550 209390 224790 224780 175210 201750 256140 233200 226390 156660 124970 136830 136740 117140 132860 161170 150330 186070 196780 214360 225280 227740 186650 207600 254260 222770 215370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137450000 23919 275;1599 22452 44930;44931 36172 36172 1 9606 Homo sapiens 0.06502938211713172 SAINEVVTR Unmodified 987.53491 0.53490874 2204 B2R4C1;P62899;H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899-2;B8ZZK4 RPL31 60S ribosomal protein L31 yes no 0 0 0 5.5 1.12 1 1 1 1 40.743 40.817 2 0.00061879 9853 20230619_1886_Aki_TMTPro18x_K_F6 128.58 80.543 1237100 993400 1022200 1156600 1242100 1291700 1297500 1301100 1470200 1381100 1442500 1430100 1644900 1247600 1214800 1773900 1664900 1423400 1142100 910970 1060300 1156600 1274300 1296500 1310300 1330600 1487100 1393100 1489600 1444400 1651400 1320900 1270700 1752900 1586900 1356600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5287200000 23920 2204 22453 44932;44933;44934;44935 36173;36174;36175 36174 3 9606 Homo sapiens 0.040642684378553895 SAIPEQIISSTLSSPSSNAPDPCAK Unmodified 2556.2377 0.23774703 1992 Q96HA1-2;A8CG34-2;Q96HA1-3;A8CG34;Q96HA1;C9JER0;C9J370;A0A0J9YWR1;Q6PJE2-5;Q6PJE2 POM121;POM121C;POMZP3 Nuclear envelope pore membrane protein POM 121;Nuclear envelope pore membrane protein POM 121C;POM121 and ZP3 fusion protein yes no 0 0 0 8 0 1 61.599 61.628 3 0.0064999 18486 20230619_1888_Aki_TMTPro18x_K_F8 56.95 49.504 25829 21740 23870 26085 20460 26976 26115 27537 30088 30445 30203 28910 30613 26082 25567 33061 29059 33169 23872 19939 24379 26001 21717 27214 26136 28167 30435 30563 30987 29332 30993 27370 26324 33094 27798 31488 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58829000 23921 1992 22454 44936 36176 36176 1 9606 Homo sapiens 0.021877664967178134 SAIQNLHSFDPFADASK Acetyl (Protein N-term) 1888.8955 0.89554151 3166 Q6IAV3;K7EM18;P41567 SUI1;EIF1 Eukaryotic translation initiation factor 1 no no 1 0 0 4 0 1 62.65 62.655 3 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13764000 23922 3166 22455 44937 0 9606 Homo sapiens -0.013350435496022328 SAITPGGLR Unmodified 870.49232 0.49231565 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4;H0YIZ0 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 1.5 0.5 1 1 39.789 39.824 2 0.011587 9709 20230619_1881_Aki_TMTPro18x_K_F2 82.279 46.399 137440 93829 117930 115410 151430 170480 160350 150230 193270 126460 132430 138140 110840 111850 164070 134350 148040 128970 126800 86147 121940 115510 155000 167720 162070 154220 192380 129570 137940 138820 116490 117330 164840 134460 141660 122620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 422960000 23923 657 22456 44938;44939 36177 36177 1 9606 Homo sapiens 0.05188918100293449 SAIYGFGDQSNLR Unmodified 1426.6841 0.68409218 1474 A0A384NPM7;Q8NBX0 SCCPDH Saccharopine dehydrogenase-like oxidoreductase yes no 0 0 0 7.5 0.5 1 1 50.735 50.812 2 2.8196999999999998E-21 13855 20230619_1888_Aki_TMTPro18x_K_F8 278.95 244.57 103420 87009 97021 145090 147490 167180 171290 166850 187900 133540 142740 149900 151670 128870 155120 149170 157790 178380 95598 80102 100200 141880 149870 167240 171700 169610 188510 137330 149070 150750 154700 134750 157790 151230 151090 169040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 186150000 23924 1474 22457 44940;44941 36178;36179 36179 2 9606 Homo sapiens -0.012182507300622092 SAIYGFGDQSNLRK Unmodified 1554.7791 0.77905519 1474 A0A384NPM7;Q8NBX0 SCCPDH Saccharopine dehydrogenase-like oxidoreductase yes no 0 0 1 3 0 1 48.038 48.118 3 2.4006E-27 13289 20230619_1882_Aki_TMTPro18x_K_F3 213.94 201.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23925 1474 22458 44942 36180 36180 1 9606 Homo sapiens 0.023856827411236736 SAKGEEVDVAR Unmodified 1159.5833 0.5833155 2229 B2R644;O94760 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 1 3 0 1 35.083 35.144 3 0.047765 7639 20230619_1882_Aki_TMTPro18x_K_F3 50.286 34.742 105480 69432 131740 84364 78845 69850 117370 125930 95180 115460 146610 94420 85159 66084 133560 39820 63008 36323 97612 63751 130540 83976 86820 73069 115600 124420 100200 116450 145040 95876 90976 67755 130550 40591 60783 34634 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77109000 23926 2229 22459 44943 36181 36181 1 9606 Homo sapiens 0.009907172870953218 SAKPGQEEDGPLK Unmodified 1354.6729 0.67285879 1756 A0A8I5KR77;B3KUR4;C9JTY6;C9JFL8;A0A8I5KQQ6;C9J088;A4D299;A0A8I5KRU1;J3KR72;P49848-4;P49848-2;P49848;P49848-3 TAF6 Transcription initiation factor TFIID subunit 6 yes no 0 0 1 4 0 1 40.022 40.065 3 5.5245E-05 9594 20230619_1883_Aki_TMTPro18x_K_F4 113.99 94.701 37338 27732 36902 37190 43014 43679 40395 45769 51869 45528 53895 54163 51317 42889 45339 38904 52018 43882 34502 25475 37609 36869 44114 43725 41256 46586 52248 46288 55079 54185 52166 44406 46537 39471 49650 41656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27958000 23927 1756 22460 44944 36182 36182 1 9606 Homo sapiens 0.00970927175808356 SALALAIK Unmodified 785.50109 0.50108942 3505 P25789;H0YMZ1;H0YN18;H0YL69;B2RDG0;H0YMA1;P25789-2;H0YKT8;H0YMI6;H0YKS0 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type;Proteasome subunit beta type yes no 0 0 0 3 0 1 54.443 54.489 2 0.0058911 16157 20230619_1882_Aki_TMTPro18x_K_F3 112.17 41.259 497090 389400 400440 432030 477490 702240 479050 482000 1654400 270650 165090 175160 227620 181740 325180 233570 482750 215850 458790 356960 416390 436210 494200 684060 517510 501800 1554800 285540 241960 182470 236000 190140 336970 233200 458520 206190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 395180000 23928 3505 22461 44945 36183 36183 1 9606 Homo sapiens 0.09975891736758058 SALASVIMGLSPILGK Unmodified 1555.9008 0.90075023 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 7.5 0.5 1 1 66.646 66.667 3 2.6728E-15 20603 20230619_1888_Aki_TMTPro18x_K_F8 153.09 132.63 31911 25788 27374 26929 21748 31219 33184 29382 35392 37784 36045 41384 50121 37789 33897 45848 48588 54747 29470 23625 28111 27175 23407 31195 32858 30377 35979 37846 37590 41715 49916 39564 35630 46400 46389 51883 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128170000 23929 1860 22462 44946;44947 36184 36184 1 9606 Homo sapiens 0.14503588779302845 SALEEFSK Unmodified 909.44436 0.4443624 645 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 0 0 0 4 0 1 50.41 50.441 2 0.0010715 14199 20230619_1883_Aki_TMTPro18x_K_F4 149.65 91.46 237350 202680 224700 231190 244190 300940 287090 265070 297250 300900 305010 301720 321660 249240 277660 321490 325260 320310 219430 185790 229720 232090 253480 298150 287230 274230 302630 302200 313280 304510 325540 262770 285980 321710 310710 304260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108860000 23930 645 22463 44948 36185 36185 1 9606 Homo sapiens -0.013982006104129141 SALEQMR Unmodified 833.40654 0.40653711 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9;B4DSR6;A0A7P0TAS7;A0A7P0TB96 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4.5 0.5 1 1 38.02 38.088 2 0.020943 8746 20230619_1885_Aki_TMTPro18x_K_F5 103.91 32.766 48105 45388 46961 53074 61843 64868 62853 58952 76186 41538 47418 39306 38149 33791 57743 42925 50386 34781 44515 41599 48064 53120 63075 64574 63681 60178 75587 42916 49585 39871 40182 35503 57878 42588 48172 33179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90231000 23931 3881 22464 44949;44950 36186 36186 1 9606 Homo sapiens -0.016829900768811967 SALGPNVTK Unmodified 885.49198 0.4919813 2690 B7Z592;Q8WU90;Q8WU90-2 ZC3H15 Zinc finger CCCH domain-containing protein 15 yes no 0 0 0 4.5 3.5 1 1 42.778 42.78 2 0.00023009 11305 20230619_1880_Aki_TMTPro18x_K_F1 143.21 72.688 259030 200500 242870 257310 260850 277950 244780 252650 309830 284780 307410 273480 322660 253090 238380 269620 350750 293050 239310 184070 248370 255430 269170 278940 249840 260710 311850 285840 315820 277510 324780 262790 250220 271920 334110 278310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133830000 23932 2690 22465 44951;44952 36187;36188 36187 2 9606 Homo sapiens 0.04465498380443478 SALIAALCDK Unmodified 1060.5587 0.55868065 2715 B7ZMD6;Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes no 0 0 0 1.5 0.5 1 1 59.899 59.905 3 0.035496 18611 20230619_1881_Aki_TMTPro18x_K_F2 52.247 36.675 14540 12889 16377 15067 13559 17199 16222 17298 20011 15964 15718 16792 18233 18399 15409 19751 21154 19759 13466 11816 16436 15073 14396 17227 16325 17625 19991 16242 16444 17069 18424 18984 16059 19816 20175 18772 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83487000 23933 2715 22466 44953;44954 36189 36189 1 9606 Homo sapiens 0.03082365880004545 SALNEVHLVVMR Unmodified 1366.7391 0.73910463 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;X6RE05 UBR4 E3 ubiquitin-protein ligase UBR4 no no 0 0 0 1 0 1 50.509 50.509 3 3.1735E-05 14576 20230619_1880_Aki_TMTPro18x_K_F1 120.14 41.588 27955 24590 26158 30745 22427 27527 29331 29560 34895 28620 31676 37932 33514 26442 28608 38577 35921 37045 25847 22558 26697 30500 23807 28120 29348 30048 35079 29258 32770 37692 33909 28293 29637 38454 34306 35197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22766000 23934 4061 22467 44955 36190 36190 1 9606 Homo sapiens 0.07040464536839863 SALQILFSEDSTK Unmodified 1437.7351 0.73512469 4317 Q969X6;H3BSH7;Q969X6-3;A0A0J9YWM9;H3BRM8;A0A0J9YWK2 CIRH1A Cirhin yes no 0 0 0 7 0 1 62.881 62.913 3 4.8094E-05 19150 20230619_1887_Aki_TMTPro18x_K_F7 112.42 96.884 194950 150830 185420 191220 160180 218000 194140 184130 221380 218750 237200 233920 290520 209500 196190 268070 236820 263250 180130 138450 188860 190120 169670 217530 194670 191420 224650 219730 244820 236050 290070 220170 203810 267950 226380 249990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 415400000 23935 4317 22468 44956 36191 36191 1 9606 Homo sapiens 0.03376653524151152 SALYYVDLIGGK Unmodified 1297.6918 0.69180331 2754 C9JIF9;P13798;H7C393;H7C1U0;C9JLK2 APEH Acylamino-acid-releasing enzyme yes no 0 0 0 2 0 1 63.144 63.153 3 0.00090783 20039 20230619_1881_Aki_TMTPro18x_K_F2 89.403 51.383 36563 24927 39456 30962 29817 33329 34946 32191 40457 38682 34191 42511 45041 38784 43045 47267 41557 51660 33796 22888 39640 30827 31873 33500 35123 33149 40675 38871 35918 42835 45535 40583 43750 47594 39846 48983 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67358000 23936 2754 22469 44957 36192 36192 1 9606 Homo sapiens 0.05486508537501322 SANLVAATLGAILNR Unmodified 1482.8518 0.85182621 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J432;A0A994J428;B3KRA9;A0A994J4Q4;A0A994J6R6 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 7.5 0.5 1 1 65.595 65.618 3 1.5641E-10 20190 20230619_1888_Aki_TMTPro18x_K_F8 150.59 106.29 64479 73071 95196 89458 117930 88962 121820 105260 153570 96855 102210 81389 73528 71226 96643 85106 92668 64952 60001 66965 94429 89040 120420 90488 123490 106210 152390 97970 105920 83049 77136 74481 97577 84233 88511 62007 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 232520000 23937 43 22470 44958;44959 36193;36194 36194 2 9606 Homo sapiens 0.12971436534576242 SANMDHWQQR Oxidation (M) 1287.5415 0.54146746 1191 A0A8Q3WK80;A0A8Q3WK74;Q9NZL9-4;Q9NZL9-2;Q9NZL9;A0A140VJP2;A0A8Q3WK84;H7C0X7;Q9NZL9-3;B7Z1X8;A0A8Q3WK93 MAT2B Methionine adenosyltransferase 2 subunit beta yes no 0 1 0 5.33 2.05 1 1 1 28.328 28.377 3 0.0026767 5098 20230619_1885_Aki_TMTPro18x_K_F5 73.327 58.636 15827 14387 16023 16987 22025 20806 21640 18568 15963 23251 23242 20885 21993 44809 20259 17363 19928 18122 14647 13189 16355 16992 22345 20711 21665 19253 16909 23198 23440 22105 22572 43866 20596 17969 19058 17211 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7895800 23938 1191 22471 44960;44961;44962 36195;36196;36197;36198 36196 729 4 9606 Homo sapiens -0.09080161673091425 SANPAMQLDR Oxidation (M) 1117.5186 0.51860675 1429 A0A384MQX5;Q9UBV8 PEF1 Peflin yes no 0 1 0 4 0 1 35.455 35.503 2 0.0048536 7738 20230619_1883_Aki_TMTPro18x_K_F4 87.123 73.615 39046 34822 35578 35958 42686 49244 42903 43822 56511 32692 39422 41270 34444 35593 42994 40450 47075 41414 36098 31886 36543 36412 43830 48668 43651 44838 56028 33948 41062 41333 35779 37123 43778 40637 44963 39345 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32156000 23939 1429 22472 44963 36199 36199 911 1 9606 Homo sapiens -0.0354518079054742 SANSELGGIWSVGQR Unmodified 1559.7692 0.76921879 290 E9PGT6;B2R8N1;A0A024R4D1;Q99627-2;Q99627;B4DFF9 COPS8 COP9 signalosome complex subunit 8 yes no 0 0 0 7.5 0.5 1 1 54.782 54.847 3 1.0698E-18 15618 20230619_1888_Aki_TMTPro18x_K_F8 197.47 161.05 58735 50542 53022 64113 54776 67196 63022 67132 67592 65970 66158 64690 71260 58463 64450 67354 67114 59818 54285 46375 54441 63659 57043 67691 63222 68548 68556 66690 68163 65528 72226 60982 65816 67124 64138 56922 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 263530000 23940 290 22473 44964;44965 36200 36200 1 9606 Homo sapiens 0.011724947357606652 SANTEPYYR Unmodified 1099.4934 0.49343786 2953 F2Z2U4;H0Y4W2;Q9Y4A5-2;Q9Y4A5;Q59FH1;A0A994J575 TRRAP Transformation/transcription domain-associated protein yes no 0 0 0 4 0 1 35.506 35.554 2 0.03572 7764 20230619_1883_Aki_TMTPro18x_K_F4 69.598 58.725 19002 12231 16219 23053 22333 25421 22228 22086 23097 23768 28945 29696 29051 22193 22484 28318 32804 36247 17526 11293 16843 22390 22721 25429 22445 22846 23714 24106 29424 29627 29324 23485 23581 28780 31311 34331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16338000 23941 2953 22474 44966 36201 36201 1 9606 Homo sapiens -0.052329123214803985 SANVNEFPVLK Unmodified 1216.6452 0.64518747 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DM67 CSE1L Exportin-2 yes no 0 0 0 7.5 0.5 1 1 54.689 54.754 3 0.00030304 15611 20230619_1887_Aki_TMTPro18x_K_F7 102.4 79.024 227250 189690 231930 236900 217520 258510 244720 240430 248300 288200 272340 271260 309540 255200 255000 329750 313060 315950 210190 174050 235050 235660 227890 259320 245380 248150 253980 288130 279900 275680 312130 267770 263870 329170 298990 300230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1287900000 23942 1462 22475 44967;44968 36202;36203 36203 2 9606 Homo sapiens 0.04553068706218255 SANYCFASR Unmodified 1074.4553 0.45527821 2011 G3V167;A8K214;Q9UGN5-2;Q9UGN5;B4DV82;H0YH02 PARP2 Poly [ADP-ribose] polymerase 2 yes no 0 0 0 8 0 1 39.236 39.223 2 0.020563 9157 20230619_1888_Aki_TMTPro18x_K_F8 72.096 60.931 53872 35375 47712 53868 65863 78618 65395 68935 83586 45867 58203 50935 49333 42599 55622 41540 47453 46043 49705 32562 49305 53167 67053 77342 66495 70448 82964 47821 60484 51230 50932 44161 55920 42068 45472 43689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9867200 23943 2011 22476 44969 36204 36204 1 9606 Homo sapiens -0.07897121507789961 SAPAEEQLR Unmodified 999.49852 0.49852324 4327 Q96BK5 PINX1 PIN2/TERF1-interacting telomerase inhibitor 1 yes yes 0 0 0 1.5 0.5 1 1 34.205 34.233 2 0.00057021 7366 20230619_1881_Aki_TMTPro18x_K_F2 138.06 82.621 56200 33264 49942 55796 55642 71031 48096 48819 62882 56506 65545 65251 73725 58962 49086 46857 85375 72471 51829 30673 51375 54634 57266 70104 49412 51624 63326 57004 67440 65590 73819 60447 52324 48729 81246 68610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39846000 23944 4327 22477 44970;44971 36205 36205 1 9606 Homo sapiens -0.0012460845886153038 SAPASQASLR Unmodified 986.51451 0.51450765 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 5.5 0.5 1 1 32.171 32.229 2 2.3135E-05 6630 20230619_1886_Aki_TMTPro18x_K_F6 158.85 87.993 40734 22972 46755 47860 79982 115100 56468 66789 77134 10869 16233 15351 13622 14155 36543 7788.7 20014 13998 37638 21257 47533 47067 80058 110020 58907 70001 74786 14285 19448 15384 15110 14299 35680 8373.3 19268 13251 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36510000 23945 349;3906 22478 44972;44973 36206 36206 1 9606 Homo sapiens 0.0207109777804817 SAPATGGVK Unmodified 786.42357 0.42356738 3750;4066 Q71DI3;Q16695;P68431;Q5TEC6 HIST2H3A;HIST3H3;HIST1H3A;HIST2H3PS2 Histone H3.2;Histone H3.1t;Histone H3.1;Histone H3 no no 0 0 0 7 0.816 1 1 1 35.589 35.627 2 0.00066684 7865 20230619_1886_Aki_TMTPro18x_K_F6 127.68 73.474 154890 61856 235980 204580 237740 264740 217090 299400 175750 90187 200390 200510 125610 179260 240150 44192 226280 160370 143380 57933 232800 195490 245910 263530 219210 297650 181860 105680 201420 197820 136480 178220 240290 53790 216190 151340 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 151560000 23946 3750;4066 22479 44974;44975;44976 36207;36208;36209 36207 3 9606 Homo sapiens 0.02181253800574723 SAPCGSLAFSGDR Unmodified 1323.5877 0.58774895 2915 E9PGC8;P78559;P78559-2 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 6 0 1 43.427 43.521 2 1.0995E-08 11010 20230619_1886_Aki_TMTPro18x_K_F6 156.01 92.527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23947 2915 22480 44977 36210 36210 1 9606 Homo sapiens -0.06110141561657656 SAPDQEVR Unmodified 900.43011 0.43010932 3553 P36405 ARL3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 1 0 1 29.623 29.623 2 0.0003201 5851 20230619_1880_Aki_TMTPro18x_K_F1 166.68 137.53 23109 10928 30671 30506 37325 40267 28636 35622 28121 21934 40540 47677 31638 32582 38960 12237 44449 42184 21370 10181 30621 29286 37977 39827 29406 36339 29126 23676 40684 46661 32954 33031 39637 14393 42460 39758 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12959000 23948 3553 22481 44978 36211 36211 1 9606 Homo sapiens -0.024088530387189167 SAPDRQEEISR Unmodified 1286.6215 0.62149192 1608 Q5TA58;B3KME0;B2RAD8;A0A6I8PTZ8;Q9UL18;A0A8V8TNY0;A0A8V8TQA7;Q9HCK5 AGO1;AGO4 Protein argonaute;Protein argonaute-1;Protein argonaute-4 no no 0 0 1 2 0 1 27.874 27.948 3 0.00045431 4941 20230619_1881_Aki_TMTPro18x_K_F2 101.93 82.871 9921.2 5820.1 11397 11481 13462 13065 9796 12647 12495 10841 14509 13235 12750 11524 14983 10067 14300 11996 9168.9 5379.9 11480 11142 13709 13076 10189 12894 12651 11127 14710 13272 13176 11865 15130 10266 13672 11382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17683000 23949 1608 22482 44979 36212 36212 1 9606 Homo sapiens -0.010353967982609902 SAPFEER Acetyl (Protein N-term) 876.39775 0.39774656 2875 E5RFP0;Q8WVJ2 NUDCD2 NudC domain-containing protein 2 yes no 1 0 0 1 0 1 40.223 40.223 1 0.0010961 10218 20230619_1880_Aki_TMTPro18x_K_F1 85.359 59.533 2239.6 2436.1 2535.3 3098.7 4749.5 4830.9 3615.6 3937.8 3992 3718.7 3425.2 3477.6 4758.6 4102.4 3657.6 4023.2 5034.9 5526.3 2077.5 2233.7 2587.3 3095.6 4723.7 4733.4 3722.1 4075.8 4027.2 3764.9 3599.3 3563.1 4764.1 4210.3 3816.4 4126.9 4807.4 5231.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11403000 23950 2875 22483 44980 36213 36213 1 9606 Homo sapiens -0.045396404417147096 SAPFFIPTIPGLVPR Unmodified 1610.9184 0.91844921 962 A0A0A0MTB8;Q8NI36 WDR36 WD repeat-containing protein 36 yes no 0 0 0 7 0.816 1 1 1 65.059 65.089 3 3.6151E-06 20119 20230619_1887_Aki_TMTPro18x_K_F7 118.52 103.32 49087 43754 45304 44512 43987 49603 54657 50191 57997 58389 56642 55566 61404 56870 56396 64905 57052 61997 45386 40060 46318 44993 46091 49808 54586 51458 58858 58494 58387 56595 62310 59025 57522 64913 54615 58897 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 281030000 23951 962 22484 44981;44982;44983 36214 36214 1 9606 Homo sapiens 0.1374267209644131 SAPFIECHGR Unmodified 1172.5397 0.53967654 1513 A9LSU1;A0A3B3ISV3;A0A6G9EL94;Q59F15;P02462;A0A0A0U994;A7MBN3;P29400;P29400-2;B4DFF0 COL4A1;COL4A5 Collagen alpha-1(IV) chain;Arresten;Collagen alpha-5(IV) chain yes no 0 0 0 6.5 0.5 1 1 36.681 36.749 3 3.02E-14 8246 20230619_1886_Aki_TMTPro18x_K_F6 201.33 7.2731 27842 18339 22792 27884 53529 52779 39522 36367 49673 28827 36866 35600 32555 28565 39513 28228 36194 38042 25675 16880 24063 27663 52772 51100 40929 38076 49459 29800 38244 35600 33700 29688 39811 28959 34675 36022 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46539000 23952 1513 22485 44984;44985 36215 36215 1 9606 Homo sapiens -0.03969170691038926 SAPLEIGLQR Unmodified 1082.6084 0.60840804 1500 A0A3B3IRP5;Q6P1J9;A0A1B0GUB2;A0A2R8YHB3;B4DV47;A0A2R8Y640 CDC73 Parafibromin yes no 0 0 0 6.5 0.5 1 1 48.987 49.069 2 0.0018566 13163 20230619_1887_Aki_TMTPro18x_K_F7 100.76 72.583 191010 145190 177720 208320 194250 248910 218500 228890 262550 245070 251120 238560 265300 221740 216640 287560 273450 271460 176450 133460 182130 205610 201470 247990 220270 235590 264500 246670 258660 242050 268040 232780 224680 286800 261080 258020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205820000 23953 1500 22486 44986;44987 36216 36216 1 9606 Homo sapiens 0.07040816880316925 SAPPQLPSFYK Unmodified 1233.6394 0.63937381 4199 Q86XP3;J3QRI2;J3KTK9 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 0 0 3 0 1 55.912 55.953 3 4.4119E-05 16734 20230619_1882_Aki_TMTPro18x_K_F3 133.05 107.14 65865 59096 69380 78671 70105 78494 85050 79375 91193 90289 84227 83849 101480 79204 89359 86409 89254 92864 60967 54244 70266 77822 73149 79397 85061 81342 92316 90475 87506 85236 102390 82293 91055 87097 85424 88121 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79669000 23954 4199 22487 44988 36217 36217 1 9606 Homo sapiens 0.03189970194557645 SAPSGPVR Unmodified 769.40825 0.40825167 3564 P38159;P38159-2;H3BT71;B4E352;H0Y6E7;B3KRG5;H3BUY5 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 0 0 0 5.5 1.12 1 1 1 1 29.624 29.694 2 0.0069938 5712 20230619_1886_Aki_TMTPro18x_K_F6 108.92 75.112 77525 46640 92289 92578 170780 256180 118300 141820 202740 19601 26867 28614 27413 25889 46199 23362 34512 26723 71680 43111 93792 91646 170460 243660 124800 149330 194200 27107 35897 28656 28958 26646 45871 23785 33080 25375 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 45698000 23955 3564 22488 44989;44990;44991;44992 36218;36219 36219 2 9606 Homo sapiens 0.014323870033763342 SAPSIPK Unmodified 698.39629 0.39629 3570 V9HWF2;P40925;P40925-3;A0A5K1VW95;P40925-2;B9A041;C9JF79;C9JRL4 HEL-S-32;MDH1 Malate dehydrogenase;Malate dehydrogenase, cytoplasmic yes no 0 0 0 4.5 3.5 1 1 41.814 41.812 2 0.006306 10871 20230619_1880_Aki_TMTPro18x_K_F1 134.06 32.366 431770 229170 492120 535290 630860 682270 560720 615150 620850 471810 687960 754710 655610 626590 648690 345070 810130 784060 398840 212580 497220 516670 642160 676580 571550 629200 631060 493320 701810 748290 670350 635880 666880 376930 773380 740150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 753870000 23956 3570 22489 44993;44994 36220;36221 36220 2 9606 Homo sapiens 0.035027702601951205 SAPSTGGVK Unmodified 802.41848 0.418482 2210 B4E380;K7EK07;B2R4P9;P84243;K7EMV3;A0A590UJJ6;B4DEB1;A8K4Y7;B2R6Y1;A0A1X8XL64;K7ES00;Q6TXQ4;K7EP01 H3F3B;H3F3A Histone H3;Histone H3.3 yes no 0 0 0 7 0 1 35.29 35.361 2 0.0015871 7445 20230619_1887_Aki_TMTPro18x_K_F7 128.38 51.326 27602 12902 49095 51293 85492 74870 50765 80431 42383 17107 51473 54120 31614 38186 50812 10906 57062 43057 25619 12134 48613 48877 84750 73986 53043 80002 43904 21789 51573 52729 33886 38437 51444 13339 54440 40606 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25632000 23957 2210 22490 44995 36222 36222 1 9606 Homo sapiens 0.009369499379545232 SAPTAPTPPPPPPPATPR Unmodified 1747.9257 0.92571943 1971 A6NHN7;A6NHB5;Q14202-2;Q14202 ZMYM3 Zinc finger MYM-type protein 3 yes no 0 0 0 8 0 1 43.202 43.212 3 0.00018549 10765 20230619_1888_Aki_TMTPro18x_K_F8 80.361 64.158 23889 23713 24813 25600 26776 26096 27962 26514 29873 30200 30498 27902 28308 21992 30711 21680 24731 20112 22126 21714 25159 25718 27656 26382 28186 27161 30358 30248 31157 28214 29049 22873 30804 21740 23689 19136 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11608000 23958 1971 22491 44996 36223 36223 1 9606 Homo sapiens 0.08167359906201455 SAPVMLTLSDSK Unmodified 1247.6431 0.64313856 563;3927 A0A024R9B5;B4DMM7;Q15291;B4DLF8;Q15291-2 RBBP5 Retinoblastoma-binding protein 5 no no 0 0 0 8 0 1 55.776 55.838 3 0.00051965 16088 20230619_1888_Aki_TMTPro18x_K_F8 93.623 69.332 87495 79324 85771 81164 83787 91824 88527 87606 115920 70145 62637 69585 74946 60096 75000 78266 75594 73270 80946 72627 87209 82019 87358 91987 89813 89330 114310 71903 67377 70352 76108 63276 76313 78072 72306 69653 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111680000 23959 563;3927 22492 44997 36224 36224 1 9606 Homo sapiens 0.029222719061181124 SAPWNSFLPPPPPMPGPR Unmodified 1943.9716 0.97162377 1325 Q16637;Q16637-3;Q16637-2;Q16637-4;E7EQZ4;A0A1W2PRV5;B4DP61;A0A076L8Z0;A0A0G2JRY6;I3QJX9;I2E4T1;H0YBZ9;I2E4S7;I6T6Y4;I2E4T3;I3QJX8;I2E4T2;I2E4S9;A0A0G2JRX5 SMN1;SMN2 Survival motor neuron protein yes no 0 0 0 6 0 1 63.215 63.263 3 0.0002538 19559 20230619_1886_Aki_TMTPro18x_K_F6 74.147 65.1 57220 45948 46543 49176 38306 48523 44066 45917 49739 44741 48920 49885 57233 46742 49896 56994 45585 52440 52822 42103 48059 49412 40680 49062 44302 47070 50308 45448 50602 50328 57776 48859 50671 56838 43704 49831 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206150000 23960 1325 22493 44998 36225 36225 1 9606 Homo sapiens 0.03739681816796292 SAPYEFPEESPIEQLEER Unmodified 2148.9851 0.98514438 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;Q01433-5;Q01433-3;Q01433-4;A0A7P0Z4H6;A0A590UJX5;A0A590UK85;A0A7P0T999;E9PJF6;A0A7P0TB79;E9PIJ1 AMPD2 AMP deaminase 2 yes no 0 0 0 1.5 0.5 1 1 61.595 61.6 3 2.9451999999999996E-19 19110 20230619_1880_Aki_TMTPro18x_K_F1 189.81 177.14 139850 122830 137710 143350 126540 139230 143690 145050 156730 139340 131110 122290 145350 118920 147150 163490 152540 161960 129350 112600 139930 143070 132780 141270 144320 147640 157910 140630 136330 124920 147970 125180 150000 163430 145960 153820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 250890000 23961 1570 22494 44999;45000 36226;36227 36226 2 9606 Homo sapiens -0.04338878451517303 SAQEEITEYRR Unmodified 1380.6634 0.66335673 3438 P12036-2;P12036 NEFH Neurofilament heavy polypeptide yes no 0 0 1 2.5 0.5 1 1 36.044 36.1 3 3.3006E-06 8003 20230619_1882_Aki_TMTPro18x_K_F3 147.26 90.087 74569 50442 75679 55937 56114 58507 51219 63320 54303 90566 101270 100500 97010 88001 97305 101750 119140 98178 68886 46269 76339 56151 59678 59115 52171 65043 57151 90285 101510 101150 99197 91875 100160 101830 113630 93364 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146190000 23962 3438 22495 45001;45002 36228 36228 1 9606 Homo sapiens -0.011748411097414646 SAQFEHTLLVTDTGCEILTR Unmodified 2290.1263 0.12634609 3642 P53582;Q5CZ91;H0Y955;H0Y903 METAP1;DKFZp781C0419 Methionine aminopeptidase 1 yes no 0 0 0 6 0 1 56.645 56.717 3 4.8579E-05 16762 20230619_1886_Aki_TMTPro18x_K_F6 86.625 65.974 41207 31776 44062 45555 58383 60462 50269 45148 57400 60582 58247 69271 66149 64197 72436 71480 66994 77702 38111 29208 44740 45041 59259 59658 51369 47607 58165 60683 60172 69717 67608 66742 73245 72070 64227 73697 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276960000 23963 3642 22496 45003 36229 36229 1 9606 Homo sapiens 0.03288796650031145 SAQFFNYK Unmodified 1003.4763 0.47633123 2219 B4DGN8;B2R5M9;Q02809;Q02809-2;B4DHT1;Q5JXB7;Q5JXB8 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes no 0 0 0 3 0 1 52.339 52.402 3 0.0068587 15211 20230619_1882_Aki_TMTPro18x_K_F3 78.149 43.896 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23964 2219 22497 45004 36230 36230 1 9606 Homo sapiens -0.02526788136617597 SAQNLPGGGPASHSNPR Unmodified 1645.7921 0.7920795 1611 A0A6Q8PGX0;A0A7I2PK71;A0A6Q8PGR4;A0A6Q8PEV5;A0A6Q8PH03;A0A7I2SYM4;A0A6Q8PFB5;A0A6Q8PFB1;A0A6Q8PF12;Q9BYV8-5;Q9BYV8-2;Q9BYV8 CEP41 Centrosomal protein of 41 kDa yes no 0 0 0 7.5 0.5 1 1 30.958 31.012 3 1.4137E-06 5972 20230619_1888_Aki_TMTPro18x_K_F8 97.502 75.288 5273.8 4328.4 7320 8399.9 10116 10054 8521.2 8775.8 10207 8910.1 11741 8816.3 7905.2 7708.6 9933.3 7427.4 11225 10771 4892.3 3994 7313.2 8160.2 10231 10008 8738.3 9056.3 10355 8998.2 11789 8924.5 8293.3 7975.5 10122 7663.3 10725 10196 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 43665000 23965 1611 22498 45005;45006 36231;36232 36232 2 9606 Homo sapiens -0.004984861467619339 SAQQESLPYNMEK Oxidation (M) 1539.6875 0.68752257 4038 Q5JRA6-2;Q5JRA6;A0A0A0MRH6 MIA3 Melanoma inhibitory activity protein 3 yes no 0 1 0 4 0 1 43.006 43.05 3 0.007014 10878 20230619_1883_Aki_TMTPro18x_K_F4 67.115 47.792 30208 21601 26102 28368 34343 35447 35932 39071 41253 34368 43765 40651 37340 34905 36797 42783 42163 39423 27879 19842 26996 28187 35057 35387 36303 39519 41785 35179 44482 40823 38313 36585 37757 42664 40270 37489 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19526000 23966 4038 22499 45007 36233 36233 2658 1 9606 Homo sapiens -0.060733687384072255 SAQTFLSEIR Unmodified 1150.5982 0.59823728 1904 A1L192;Q9BWW4-2;Q9BWW4-3;Q9BWW4;P81877-5;P81877-3;P81877-4;P81877;P81877-2;U3KQ46;Q9BWG4-2;A0A087WVT6;D6RAC5;A0A087X159;B7Z4K7;A0A024R7K9;Q9BWG4 SSBP3;SSBP2;SSBP4 Single-stranded DNA-binding protein 3;Single-stranded DNA-binding protein 2;Single-stranded DNA-binding protein 4 yes no 0 0 0 7.5 0.5 1 1 54.788 54.853 2 1.4404E-06 15689 20230619_1887_Aki_TMTPro18x_K_F7 173.24 120.52 417300 369770 366140 394580 338500 392860 389830 380850 424670 411110 427540 408540 412920 380380 470970 453700 450780 441680 385680 338700 375950 396590 355460 397250 391260 390820 430750 413830 437940 414050 424830 397040 476680 454170 431430 419670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 411720000 23967 1904 22500 45008;45009 36234;36235 36234 2 9606 Homo sapiens 0.028962091550738478 SARPLTGPETEGR Unmodified 1369.695 0.69499121 1389 Q96PE2;A0A2X0TVV1 ARHGEF17 Rho guanine nucleotide exchange factor 17 yes no 0 0 1 4 0 1 31.157 31.221 3 0.00015197 6027 20230619_1883_Aki_TMTPro18x_K_F4 88.311 60.107 16146 13818 16791 17551 21988 26760 25290 22253 28413 19649 23544 25924 22315 20934 23607 21956 26472 29967 14939 12679 17096 17533 22533 26246 25384 22979 28538 20209 24354 25858 22894 21813 24132 22501 25325 28365 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20400000 23968 1389 22501 45010 36236 36236 1 9606 Homo sapiens 0.024931516442165957 SASAPAAEGEGTPTQPASEK Acetyl (Protein N-term) 1926.8807 0.88067931 3032 H0Y993;P35659;B4DFG0;P35659-2;A0A494C198;H0Y8X0;D6R9L5 DEK Protein DEK yes no 1 0 0 1.5 0.5 1 1 41.864 41.903 3 4.5E-22 10938 20230619_1880_Aki_TMTPro18x_K_F1 81.723 68.956 35607 22946 28737 35499 34020 44111 37328 39306 54938 42195 48717 62344 71949 65636 37176 81922 86541 91727 32829 21128 29894 34902 35111 43804 37977 40566 54696 43153 51335 62522 71136 68440 41385 82460 82360 87000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130520000 23969 3032 22502 45011;45012 36237 36237 1 9606 Homo sapiens -0.045685802082743976 SASASPLTPCSVTR Unmodified 1432.698 0.69802768 3967 Q3KQU3-4;B3KU03;Q6NX58;D3DPS3;Q3KQU3;Q3KQU3-2 MAP7D1;RPRC1 MAP7 domain-containing protein 1 yes no 0 0 0 1 0 1 41.596 41.596 2 4.958E-05 10819 20230619_1880_Aki_TMTPro18x_K_F1 142.1 125.56 35472 28724 35044 35272 32261 38394 38102 39012 38346 40685 32652 37547 40768 36571 36719 46228 42995 43960 32794 26354 35598 35132 33901 38595 38097 39850 38866 40926 34166 38220 41183 38260 37808 46144 41083 41774 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20881000 23970 3967 22503 45013 36238 36238 1 9606 Homo sapiens -0.0010134129329344432 SASAVYVLDLK Acetyl (Protein N-term) 1206.6496 0.64960415 460 Q9BXS5-2;A0A024R7K8;Q9BXS5;B3KNH5;E7ENJ6;B4DN99;B4DDG7;K7EJL1;K7ENA7 AP1M1 AP-1 complex subunit mu-1 yes no 1 0 0 5.5 0.5 1 1 64.046 64.092 2 5.2865E-09 19791 20230619_1885_Aki_TMTPro18x_K_F5 83.948 45.142 104050 91572 93491 103650 93931 109490 108610 112510 116780 123270 140670 129030 139420 105630 122050 133410 142950 153710 96180 83923 95928 103790 97993 110350 108950 115010 119460 124140 143060 130000 141420 111300 125630 134710 136640 145740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 340640000 23971 460 22504 45014;45015 36239;36240 36239 2 9606 Homo sapiens 0.05454533129136507 SASDLSEDLFK Unmodified 1210.5717 0.57174776 3122 Q92541;I7GPQ7 RTF1 RNA polymerase-associated protein RTF1 homolog yes no 0 0 0 3.5 0.5 1 1 58.179 58.196 2 7.4842E-06 17699 20230619_1882_Aki_TMTPro18x_K_F3 153.12 112.69 55008 46951 53675 58567 47485 62487 60696 59939 72083 70033 65359 57648 70377 61926 65066 77104 75278 66299 50868 43074 54589 58241 50261 62807 60786 61676 72532 69882 67545 59275 71445 64528 66884 76603 71864 63119 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71837000 23972 3122 22505 45016;45017 36241 36241 1 9606 Homo sapiens -0.025115245269262232 SASLCAATLAAVLQR Unmodified 1530.8188 0.81881152 2017 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 yes no 0 0 0 5 0 1 61.968 62.016 2 6.2255E-05 18820 20230619_1885_Aki_TMTPro18x_K_F5 107.12 77.373 45064 38617 42497 50040 41859 52805 46919 44376 54538 56847 50496 52322 63191 45678 62489 62529 53662 60691 41662 35442 43427 49611 43732 52977 47249 46266 55015 56652 52584 53094 63991 48271 63070 62461 51477 57638 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44333000 23973 2017 22506 45018 36242 36242 1 9606 Homo sapiens 0.07463486420192567 SASSGAEGDVSSEREP Unmodified 1563.6649 0.66487288 3972 Q496C9;Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase;D-tyrosyl-tRNA(Tyr) deacylase 1 yes no 0 0 1 1 0 2 33.571 33.571 2;3 2.2294000000000003E-25 7377 20230619_1880_Aki_TMTPro18x_K_F1 238.07 218.44 47574 32736 40713 45945 50736 55463 51587 44809 57005 54679 65913 63375 61517 53521 55297 50097 116500 63258 43894 30098 42112 45412 51944 55110 52118 46802 58104 55013 66992 63589 62713 55363 59656 51159 110510 60139 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 221830000 23974 3972 22507 45019;45020 36243;36244 36243 2 9606 Homo sapiens -0.09441296602312832 SASSLLEQRPK Acetyl (Protein N-term) 1256.6725 0.67246486 2661 B5BU99;Q9Y5A9;S4R3J8;S4R3V3 YTHDF2 YTH domain-containing family protein 2 yes no 1 0 1 6.5 0.5 1 1 45.962 46.048 2 6.4565E-12 11753 20230619_1887_Aki_TMTPro18x_K_F7 73.233 51.933 95662 78707 93673 94214 88914 96106 94416 95459 103940 107380 123050 96945 118800 91370 92305 119220 113930 112510 88444 72189 95242 93923 92872 97047 95231 97884 106110 107560 124950 98832 120050 95959 95672 118900 108790 106940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268910000 23975 2661 22508 45021;45022 36245;36246 36246 2 9606 Homo sapiens 0.05439552246616586 SASVAPFTCK Unmodified 1066.5117 0.51173046 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 2 0 1 47.288 47.364 2 0.00031777 13225 20230619_1881_Aki_TMTPro18x_K_F2 150.35 120.88 78384 66767 77830 88960 78396 82082 83228 70957 89666 69244 75930 64525 85208 72926 68974 96973 90876 69464 72493 61297 79175 87893 81477 83279 83821 73294 90381 70004 78872 66126 85934 76177 71779 95448 86590 66348 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44187000 23976 68 22509 45023 36247 36247 1 9606 Homo sapiens -0.0188649367112248 SASVVSVISR Acetyl (Protein N-term) 1045.5768 0.57677356 2963 F5GXX5;Q53G02;P61803;F5H895;A0A0B4J239 DAD1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 yes no 1 0 0 6 0.816 1 1 1 53.046 53.119 2 3.3603E-14 15232 20230619_1886_Aki_TMTPro18x_K_F6 153.08 137.64 20918 13044 14020 19859 13136 22099 14404 20565 24371 20803 27364 17938 18012 13302 13549 18606 19711 14648 19261 12010 14844 19507 13849 22110 14776 21102 24348 20928 27442 18218 18456 14161 14224 18377 18765 13974 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 710970000 23977 2963 22510 45024;45025;45026 36248 36248 1 9606 Homo sapiens 0.055808241263775926 SATEQSGTGIR Unmodified 1105.5364 0.53636531 1627 O95831;O95831-3;A0A6Q8PFM5;A0A6Q8PG15;A0A7I2PK44;A0A6Q8PHJ9;A0A6Q8PHC0;O95831-2;E9PMA0;A0A140VK04;O95831-5;A0A6Q8PHJ4 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 0 2.5 0.5 1 1 29.998 30.08 2 0.001265 5754 20230619_1881_Aki_TMTPro18x_K_F2 97.734 81.531 7034.8 4310 9044.7 7742.5 10267 8428.1 9523.2 9711.5 10884 6833.1 13079 15634 11133 12138 12269 5230.2 17036 12852 6510.1 3977.4 9027.6 7546 10519 8501.4 9692 9759.9 11074 7331.2 13251 15335 11500 12263 12676 5820.2 16225 12141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29728000 23978 1627 22511 45027;45028 36249 36249 1 9606 Homo sapiens -0.012181422640423989 SATGSVVSTR Unmodified 963.49852 0.49852324 1377 C9JMN1;A0A2S1ZR87;A0A2S1ZR79;Q96SB8;Q96SB8-2;A0A0A0MRY1 SMC6 Structural maintenance of chromosomes protein 6 yes no 0 0 0 6.5 0.5 1 1 31.586 31.651 2 0.0069722 6421 20230619_1886_Aki_TMTPro18x_K_F6 85.731 73.104 6396.7 3498.5 7312.9 5903 6522.5 10201 6782.2 8314.2 7403.9 5172.4 9883.6 11876 7917.2 7208.6 7100.8 3294 8901.1 11067 5909.6 3227.6 7335.3 5818.1 6866.4 9931.3 6852.6 8535.6 7588.4 5599.4 9949.4 11579 8105.7 7387.4 7313.2 3820.8 8514.1 10421 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7579100 23979 1377 22512 45029;45030 36250 36250 1 9606 Homo sapiens 0.015313915411525159 SATLASIDAELQK Unmodified 1345.7089 0.70890994 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 5 0 1 58.925 58.979 3 2.9652E-11 17472 20230619_1885_Aki_TMTPro18x_K_F5 186.17 144.63 68710 54006 71731 64073 52847 57662 67995 65651 71658 75655 75079 66079 79235 63263 68869 76636 71319 77489 63541 49537 72281 63844 56771 58996 67833 66795 72954 75619 76989 67454 80208 66094 70394 76823 68257 73568 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47124000 23980 2727 22513 45031 36251 36251 1 9606 Homo sapiens 0.04988384352668618 SATLLQLITK Unmodified 1086.6649 0.66486028 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;O00429-7;H0YI79;A0A994J6A0;A0A994J3G1;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 0 5 0 1 63.045 63.092 3 4.0386E-05 19325 20230619_1885_Aki_TMTPro18x_K_F5 128.52 98.753 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23981 3212;3213 22514 45032 36252 36252 1 9606 Homo sapiens 0.12499444716991093 SATLQVR Unmodified 773.43955 0.43955179 2287 Q9ULX3;B2RAR2 NOB1 RNA-binding protein NOB1 yes no 0 0 0 7 0 1 35.237 35.308 2 0.043322 7430 20230619_1887_Aki_TMTPro18x_K_F7 80.462 53.295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23982 2287 22515 45033 36253 36253 1 9606 Homo sapiens 0.043769600374730544 SATQFTGR Unmodified 866.42463 0.42463001 2564 B4DP80;Q8NCW5;Q8NCW5-2;A0A7P0TAG8 APOA1BP NAD(P)H-hydrate epimerase yes no 0 0 0 6.75 0.829 2 1 1 34.307 34.345 2 0.0021552 7068 20230619_1887_Aki_TMTPro18x_K_F7 131.22 112.13 153990 80630 160970 172450 217020 236810 189010 203320 227700 165950 223880 253770 237480 202100 179970 110560 279730 248580 142130 74678 163840 167250 220240 233610 193420 208990 229410 172500 230600 251580 239280 205500 189090 120560 266470 234750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162390000 23983 2564 22516 45034;45035;45036;45037 36254;36255;36256 36255 3 9606 Homo sapiens -0.013925318305155088 SATREPPYR Unmodified 1075.5411 0.54105675 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 1 5.5 0.5 1 1 27.677 27.73 3 2.7384E-05 4996 20230619_1886_Aki_TMTPro18x_K_F6 173.75 135.45 123910 111150 123800 119960 157770 125040 136100 153530 142250 141750 166870 144540 157950 120910 133350 142020 172030 124440 114650 101820 126190 120600 160200 126880 138770 154490 145580 143900 169480 145900 160240 126650 138190 141390 163900 118550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154990000 23984 1059 22517 45038;45039 36257;36258 36258 2 9606 Homo sapiens 0.006307866693759934 SATREPPYRVPR Unmodified 1427.7633 0.76334555 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 2 3.5 0.5 1 1 30.529 30.61 4 0.00040932 5853 20230619_1882_Aki_TMTPro18x_K_F3 96.745 70.204 34944 50538 39723 30764 53179 36991 38626 45017 38652 39290 46850 36993 33192 33593 40013 39829 48478 37108 32503 46055 40068 32887 53590 37250 39833 45244 39712 39923 47030 37590 34677 35067 41031 39778 46223 35316 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33275000 23985 1059 22518 45040;45041 36259 36259 1 9606 Homo sapiens 0.06657441014726828 SATSTSASPTLR Unmodified 1177.5939 0.59388018 3291 O75061-4;O75061;O75061-2 DNAJC6 Putative tyrosine-protein phosphatase auxilin yes no 0 0 0 6.5 0.5 1 1 33.458 33.519 2 4.2589E-09 6705 20230619_1887_Aki_TMTPro18x_K_F7 169.99 145.47 19377 11082 17975 22656 13512 17379 18406 16063 17587 23573 27946 34716 28762 27811 30652 18028 39512 35357 17873 10251 18340 21832 14536 17922 18260 16731 18390 23747 28277 34445 29445 28403 31548 19288 37690 33414 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18230000 23986 3291 22519 45042;45043 36260;36261 36261 2 9606 Homo sapiens 0.012186999415234823 SATSVDQRPK Acetyl (Protein N-term) 1129.5728 0.57275081 881 Q96MZ5;A0A087X0Q1;Q7Z739;A0A087X0C3;S4R373 YTHDF3 YTH domain-containing family protein 3 yes no 1 0 1 3.5 0.5 1 1 32.534 32.598 2 0.0012326 6611 20230619_1882_Aki_TMTPro18x_K_F3 58.23 41.675 17787 7104.2 22880 19668 28539 43375 26659 26516 28123 21529 32805 36768 32892 26159 28216 12591 33462 31121 16434 6625 22902 19104 29225 41608 27040 28109 28720 22509 33465 36229 33327 26642 28972 13965 31950 29371 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34478000 23987 881 22520 45044;45045 36262 36262 1 9606 Homo sapiens 0.013147346326832121 SATVELEK Unmodified 875.46001 0.46001246 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;A0A804HL78;O94854 MACF1;KIAA0754 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5;Uncharacterized protein KIAA0754 yes no 0 0 0 3 0 1 44.428 44.501 2 0.032627 11529 20230619_1882_Aki_TMTPro18x_K_F3 77.732 33.924 45664 32117 49569 46327 50942 59907 49907 54248 56963 61971 70484 70133 69598 60215 63536 48922 79832 71661 42217 29535 50032 45789 52803 59391 50639 55994 58191 62454 71635 70442 70783 61874 65523 50673 76168 67853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175240000 23988 1566 22521 45046 36263 36263 1 9606 Homo sapiens 0.01730085906626755 SATYVNTEGR Unmodified 1096.5149 0.51490158 1339 E5KRK5;A0A291FIZ5;P28331-4;P28331;P28331-2;P28331-5;B4DJ81;P28331-3;Q9P1A0 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 3.5 0.5 1 1 33.762 33.822 2 2.8676E-05 7054 20230619_1883_Aki_TMTPro18x_K_F4 183 142.73 76256 43381 106680 112370 182820 214420 133390 152190 137850 81862 134720 126430 127090 127580 112530 54121 140120 116940 70610 40306 107040 108930 182550 207420 137530 157780 139860 88012 137970 126350 129390 127660 115860 59318 133640 110490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 96779000 23989 1339 22522 45047;45048 36264;36265 36265 2 9606 Homo sapiens -0.029495272927761107 SAVCIADPLPTPSQEK Unmodified 1711.8451 0.84508585 4347 Q99575;Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 0 6 0 1 54.464 54.541 3 1.1409E-05 15803 20230619_1886_Aki_TMTPro18x_K_F6 100.43 83.348 107680 84209 96468 114160 87806 98939 93217 98594 97009 134480 113700 119570 145060 115030 108640 145900 125150 135490 99454 77350 98890 112600 92075 101190 93872 101720 99524 133460 117260 121880 145260 120480 112230 145430 119650 128760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 141240000 23990 4347 22523 45049 36266;36267 36266 2 9606 Homo sapiens 0.017637108009694202 SAVDQAGGAQIVIDHLR Unmodified 1748.9169 0.91694566 2366 B3KNU0;P52306-4;P52306;P52306-5;D6RHH8;D6REZ0 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes no 0 0 0 5.5 0.5 1 1 51.832 51.907 3 2.5284E-13 14653 20230619_1886_Aki_TMTPro18x_K_F6 146.76 119.42 92994 93864 112860 96960 102750 134960 94783 105190 133280 119720 100570 120020 134720 89965 140040 128030 119430 153020 86266 85916 112760 98225 107510 132890 97289 109850 132370 120270 106390 120740 136490 95974 141110 129460 114700 144950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2714400000 23991 2366 22524 45050;45051 36268 36268 1 9606 Homo sapiens 0.07244386269735514 SAVDYNTCAGVWSQDK Unmodified 1799.7785 0.77846285 2661 B5BU99;Q9Y5A9;Q9Y5A9-2 YTHDF2 YTH domain-containing family protein 2 yes no 0 0 0 5.5 0.5 1 1 52.096 52.172 3 0.00048227 14692 20230619_1885_Aki_TMTPro18x_K_F5 59.502 45.712 50051 48987 45876 51165 46827 57708 52191 54943 69838 60366 61810 56332 66834 51444 55540 62232 61865 66956 46305 44847 47004 51598 48796 57802 52860 56452 69807 60621 63962 57227 67482 53840 57063 62607 59166 63526 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 281710000 23992 2661 22525 45052;45053 36269 36269 1 9606 Homo sapiens -0.08943524760888977 SAVEAER Unmodified 760.37153 0.37153181 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 1 0 1 28.324 28.324 2 0.086363 5343 20230619_1880_Aki_TMTPro18x_K_F1 71.877 18.526 8543.7 4733.4 16096 12952 29641 25081 18608 33447 13542 5979.8 19441 26642 7526.8 16495 24492 4845.9 20659 17987 7941.9 4403.7 15897 12564 29325 24620 19291 32801 14275 8116.7 19229 25745 8929.9 16687 24284 5862.3 19785 16955 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6637800 23993 3384 22526 45054 36270 36270 1 9606 Homo sapiens -0.018239096131878796 SAVEAQNEVTENPK Unmodified 1514.7213 0.72126554 1030 A0A0F7NGI8;Q32MZ4-3;Q32MZ4-2;Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes no 0 0 0 2.5 0.5 1 1 41.438 41.508 3 1.3298E-16 10487 20230619_1881_Aki_TMTPro18x_K_F2 207.8 188.06 42068 30364 40320 42723 50640 59488 45770 44439 61097 58555 59902 63021 71830 58144 57364 57373 68485 62919 38857 27912 41276 42322 51714 58517 46901 46811 61352 58589 62043 63574 72229 60119 59193 57989 65380 59723 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134650000 23994 1030 22527 45055;45056 36271 36271 1 9606 Homo sapiens -0.015506239749583983 SAVENCQDSWR Unmodified 1350.5623 0.56226248 3630 P52209-2;P52209;B4E2U0;B4DL86;B4DV68;A9Z1X1 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 2.5 0.5 1 1 38.999 39.059 2 9.0161E-23 9353 20230619_1881_Aki_TMTPro18x_K_F2 280.55 257.12 285370 253640 277860 245620 364890 405970 348780 361530 397620 381560 354020 345530 408380 310620 334000 331100 403560 341650 263950 232130 284030 251040 371770 397430 354080 372630 400790 383500 367550 351110 411340 322890 344720 333060 385020 324610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 577470000 23995 3630 22528 45057;45058 36272;36273 36272 2 9606 Homo sapiens -0.09899616084089757 SAVEQVVK Unmodified 858.48108 0.48108226 4076 Q5VTR2;Q05DC0;A0PJJ6 RNF20 E3 ubiquitin-protein ligase BRE1A yes no 0 0 0 5 0 1 43.351 43.432 2 7.6723E-09 10960 20230619_1885_Aki_TMTPro18x_K_F5 161.02 96.756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23996 4076 22529 45059 36274 36274 1 9606 Homo sapiens 0.04618096006151973 SAVESGQADDERVR Unmodified 1517.707 0.70701246 3751 P78318 IGBP1 Immunoglobulin-binding protein 1 yes yes 0 0 1 1 0 1 30.19 30.19 3 3.7402E-16 6063 20230619_1880_Aki_TMTPro18x_K_F1 196.18 179.15 19871 18060 21744 15362 26825 24722 19503 22097 22404 18792 23867 18617 20618 17472 23316 18793 31564 21468 18401 16511 21959 15889 27226 24256 20199 22647 22709 19171 24246 18893 21284 18137 24087 19029 30051 20400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21140000 23997 3751 22530 45060 36275 36275 1 9606 Homo sapiens -0.031132764032463456 SAVGFDYQGK Unmodified 1070.5033 0.50327426 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;Q76MU0 CTTN;EMS1 Src substrate cortactin yes no 0 0 0 6.5 0.5 2 2 48.226 48.309 2;3 3.581E-05 12780 20230619_1887_Aki_TMTPro18x_K_F7 152.28 111.25 207140 168430 200820 232300 232980 248150 256650 244070 289740 302630 304790 316590 333070 284810 286350 363760 343950 329360 191480 154710 205220 229480 240040 249620 258380 251230 294030 303130 313300 319720 336880 298940 295610 362140 328430 313250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 556040000 23998 1413 22531 45061;45062;45063;45064 36276;36277 36277 2 9606 Homo sapiens -0.02915724316108026 SAVGFEYQGK Unmodified 1084.5189 0.51892433 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;Q76MU0;A0A0B6XJY7 CTTN;EMS1 Src substrate cortactin yes no 0 0 0 6.33 0.471 2 1 47.654 47.738 2 0.00048934 12930 20230619_1886_Aki_TMTPro18x_K_F6 142.98 99.47 223910 179960 225510 244590 243320 252710 261290 247070 299870 325790 359970 369890 365110 288780 316930 401870 385480 380230 207030 165290 229320 241750 251700 254820 263640 254980 305800 326300 366740 370810 370070 306560 327380 400550 368130 361390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 314430000 23999 1413 22532 45065;45066;45067 36278;36279;36280;36281 36279 4 9606 Homo sapiens -0.019954377990416106 SAVGHEYQSK Unmodified 1104.52 0.51998696 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;Q76MU0 CTTN;EMS1 Src substrate cortactin yes no 0 0 0 5 0.816 1 1 1 32.808 32.866 3 2.8173E-05 6721 20230619_1885_Aki_TMTPro18x_K_F5 147.74 107.96 29502 15485 44253 46172 59905 63764 41692 59903 40809 35536 55026 74693 41154 40003 49793 22474 62907 63282 27332 14439 43963 44270 60431 62983 43148 60769 42163 38364 55331 72757 42891 41488 51047 25241 60065 59672 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46498000 24000 1413 22533 45068;45069;45070 36282;36283 36282 2 9606 Homo sapiens -0.028092234301539065 SAVLQEAR Unmodified 872.47158 0.4715802 4753;1219 Q9Y678;A0A140VK12;Q9UBF2;Q9UBF2-2 COPG1;COPG2 Coatomer subunit gamma-1;Coatomer subunit gamma-2 no no 0 0 0 3 0 1 36.75 36.805 2 0.062676 8288 20230619_1882_Aki_TMTPro18x_K_F3 65.474 27.746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24001 4753;1219 22534 45071 36284 36284 1 9606 Homo sapiens 0.030243277206068342 SAVLSEPVLFLK Unmodified 1301.7595 0.75948895 4122 Q6P587;Q6P587-2;Q6P587-3 FAHD1 Acylpyruvase FAHD1, mitochondrial yes no 0 0 0 2 0 1 63.249 63.257 3 0.079445 20079 20230619_1881_Aki_TMTPro18x_K_F2 49.448 29.119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24002 4122 22535 45072 36285 36285 1 9606 Homo sapiens 0.1206795846831028 SAVPFNQYLPNK Unmodified 1376.7089 0.70885036 2848 Q9UPQ0-10;Q9UPQ0;D6RD46;Q9UPQ0-2;Q9UPQ0-4;G5EA03;E9PDJ9;B7Z2J4;E7EPK0;Q9UPQ0-3;Q9UPQ0-8;Q9UPQ0-5;Q9UPQ0-6;H0Y8P3;Q9UPQ0-9;B7Z5Q8;B7Z3F1;B7Z3G0;B7Z5G6;Q6N054;Q6NVB9;D6RJ93;Q9UPQ0-7;D6R8Y0 LIMCH1;DKFZp686G03277 LIM and calponin homology domains-containing protein 1 yes no 0 0 0 3.5 0.5 1 1 56.843 56.863 3 0.00017132 17157 20230619_1882_Aki_TMTPro18x_K_F3 101.71 79.178 67618 47372 56782 52866 55865 62084 54990 54377 71479 59629 63949 74129 69227 55241 76379 71379 70949 81510 62386 43448 58535 53085 58140 61919 56021 56234 71562 60444 66290 73932 70800 58481 77217 72049 68009 77272 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49918000 24003 2848 22536 45073;45074 36286 36286 1 9606 Homo sapiens 0.035564291433274775 SAVPPGADK Unmodified 840.43413 0.43413207 3594;1322 A0A1W2PQS6;F6U211;A0A2R8Y7H1;A0A2R8YFH6;S4R435;Q14489;P46783;Q59GE4 RPS10;RPS10-NUDT3 40S ribosomal protein S10 no no 0 0 0 5 0 1 37.722 37.814 2 0.0014396 8640 20230619_1885_Aki_TMTPro18x_K_F5 120.12 70.08 28539 13796 35141 34937 50920 57868 40044 47235 45942 34542 52500 61136 44987 40674 47566 22921 61093 60130 26372 12824 35386 33795 51352 56474 41215 48624 46676 36404 53292 60091 46299 41721 48926 25483 58316 56721 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34100000 24004 1322;3594 22537 45075 36287 36287 1 9606 Homo sapiens 0.0075323645500020575 SAVRPASLNLNR Unmodified 1296.7262 0.72623176 4383 Q96N67;Q96N67-6;Q96N67-2;Q96N67-5;Q96N67-3;Q96N67-4;A0A2X0SSK2;A0A0U1RRC1;A0A0U1RQJ5 DOCK7 Dedicator of cytokinesis protein 7 yes no 0 0 1 5 0 1 37.427 37.52 3 0.00019805 8497 20230619_1885_Aki_TMTPro18x_K_F5 86.262 46.195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24005 4383 22538 45076 36288 36288 1 9606 Homo sapiens 0.08973769468980208 SAVTLPR Unmodified 742.43374 0.43373813 3967 Q3KQU3-4;B3KU03;Q6NX58;D3DPS3;Q3KQU3;Q3KQU3-2 MAP7D1;RPRC1 MAP7 domain-containing protein 1 yes no 0 0 0 8 0 1 38.881 38.868 2 0.038034 9007 20230619_1888_Aki_TMTPro18x_K_F8 91.626 19.606 49823 40875 54757 49022 61459 66843 52359 53653 73602 49626 55622 50380 52292 45808 43855 57763 59578 51515 46109 37491 55270 49081 63083 65941 53985 55603 72992 50459 57714 51001 53109 48019 45685 57467 56796 49025 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39865000 24006 3967 22539 45077 36289 36289 1 9606 Homo sapiens 0.052218615258084355 SAVTTVVNPK Unmodified 1014.571 0.5709599 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 0 1 0 1 43.985 43.985 3 0.0016328 11888 20230619_1880_Aki_TMTPro18x_K_F1 88.496 62.377 54585 41687 62654 74977 86225 71157 56204 82398 82447 64024 122040 128110 94016 90129 79535 72159 117770 124210 50514 38433 63353 72879 86735 72509 59340 82888 83931 67617 122110 125840 96231 93251 83199 75748 112350 117400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125320000 24007 1647 22540 45078 36290 36290 1 9606 Homo sapiens 0.06425725614712974 SAYDSTMETMNYAQIR 2 Oxidation (M) 1911.7979 0.79787766 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 2 0 4 0 1 43.819 43.863 3 9.7183E-12 11192 20230619_1883_Aki_TMTPro18x_K_F4 164.88 154.1 43260 37262 38826 45883 37725 49791 43594 40779 47673 54922 59323 53564 59497 47337 45875 59604 50551 56535 39980 34180 39845 45664 39506 49831 43751 42676 48825 54704 60266 54250 60038 49697 47227 59488 48363 53708 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94631000 24008 161 22541 45079 36291 36291 96;97 1 9606 Homo sapiens -0.12154936532260763 SAYDSTMETMNYAQIR Oxidation (M) 1895.803 0.80296304 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 1 0 4.5 0.5 1 1 48.851 48.908 3 0.00033967 13386 20230619_1885_Aki_TMTPro18x_K_F5 80.632 68.249 48103 27144 41092 56860 46051 42596 53095 43056 44051 265270 310080 489290 514010 393240 105850 311910 367380 548940 44340 25121 42489 54718 47547 44205 53022 50028 56936 262560 315130 482320 498440 404920 130410 327370 350240 518210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157520000 24009 161 22541 45080;45081 36292 36292 96;97 1 9606 Homo sapiens -0.10910632669651932 SAYDSTMETMNYAQIR Unmodified 1879.808 0.80804841 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 6 0 1 53.944 54.021 3 7.4536E-26 15590 20230619_1886_Aki_TMTPro18x_K_F6 229.9 219.65 119080 99397 122750 130880 111860 136010 125200 120130 136440 162050 154790 158270 164480 141100 155060 158140 145590 140210 110150 91249 124280 129630 117500 136750 125870 124970 139250 161390 158410 160190 167080 146990 157330 157660 139350 133390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 410900000 24010 161 22541 45082 36293 36293 1 9606 Homo sapiens -0.09666328807043101 SAYEFSETESMLK Unmodified 1520.6705 0.67047553 1222 A0A140VK27;P09960;B4DVZ8;P09960-2;P09960-4;P09960-3 LTA4H Leukotriene A-4 hydrolase;Leukotriene A(4) hydrolase yes no 0 0 0 4 0 1 57.547 57.551 2 2.0969E-05 17327 20230619_1883_Aki_TMTPro18x_K_F4 148.32 129.54 18612 15833 17555 23393 15476 24232 19496 19538 26068 27519 29597 31017 30208 30393 28000 39935 34771 42603 17207 14553 17934 22991 16418 24307 19631 20506 26328 27500 30235 31325 30746 31858 28955 40086 33257 40408 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40617000 24011 1222 22542 45083 36294 36294 1 9606 Homo sapiens -0.06903289344199948 SAYNVYVAER Unmodified 1170.5669 0.56693715 2871 Q6LES8;E5KSX8;E5KSU5;Q00059;H7BYN3 TFAM Transcription factor A, mitochondrial yes no 0 0 0 5.5 0.5 1 1 43.48 43.567 2 0.00011992 11015 20230619_1885_Aki_TMTPro18x_K_F5 142 97.015 399800 304780 370470 370090 413340 467880 448250 416970 452380 380970 410760 402450 436690 338450 432940 468020 463890 438110 369300 279660 379460 369700 426950 464500 449990 428580 458800 387730 424600 405700 444520 358180 442200 466460 443370 416530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 412460000 24012 2871 22543 45084;45085 36295;36296 36295 2 9606 Homo sapiens -0.011523638790094992 SAYQTIDSAEAPADPFAVPEGR Unmodified 2291.0706 0.070605346 2859 D7RF68;A8K1X7;Q6RW13-2;Q6RW13 AGTRAP Type-1 angiotensin II receptor-associated protein yes no 0 0 0 3 0 1 58.785 58.814 3 9.6235E-24 17929 20230619_1882_Aki_TMTPro18x_K_F3 187.86 164.53 11324 10633 14822 11912 11053 15592 13896 13562 16207 16856 17441 19747 21263 17574 20539 22180 20873 24364 10507 9742.1 14696 11982 11874 15435 13926 14082 16435 16948 18023 19841 21541 18448 20927 22331 19992 23105 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 267720000 24013 2859 22544 45086 36297 36297 1 9606 Homo sapiens -0.023287132658879273 SAYSSYSAPVSSSLSVR Unmodified 1746.8424 0.84244331 2388 B3KQI5;P07196;I6L9F6 NEFL Neurofilament light polypeptide no no 0 0 0 2 0 1 48.894 48.959 3 9.8633E-10 13942 20230619_1881_Aki_TMTPro18x_K_F2 140.46 105.45 190960 165100 151920 173150 132890 140570 165510 138690 193910 200250 197040 190760 177400 172890 175720 202770 199410 201190 176340 151220 157400 173850 140500 144720 165840 143620 196090 198820 201120 193450 181770 180420 180180 203130 190580 191100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 213280000 24014 2388 22545 45087 36298 36298 1 9606 Homo sapiens -0.0011042133228329476 SAYVSYDVQK Unmodified 1158.5557 0.55570376 601 A0A994J517;A0A994J4F8;A0A994J4C4;A0A994J4M3;A0A024R9Z1;Q8N353;Q9NUM4 TMEM106B Transmembrane protein 106B yes no 0 0 0 7 0 1 47.163 47.251 2 0.0072309 12310 20230619_1887_Aki_TMTPro18x_K_F7 84.476 60.446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24015 601 22546 45088 36299 36299 1 9606 Homo sapiens -0.017231859731509758 SCAAAGTECLISGWGNTK Unmodified 1881.8349 0.83493187 2772 CON__P00761 yes yes 0 0 0 4.5 3.5 1 1 57.039 57.065 3 5.9895E-24 17278 20230619_1880_Aki_TMTPro18x_K_F1 205.68 175.26 + 411630 229200 319600 396200 509930 420960 474220 363110 509200 474520 510950 527050 436130 408110 467070 459120 462350 453260 379160 211510 335510 386310 512730 422650 480850 378350 516810 475320 521090 528380 449180 427360 474100 460340 442350 430610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2346000000 24016 2772 22547 45089;45090 36300;36301 36300 2 -0.0707122019587132 SCALAEDPQELR Unmodified 1387.6402 0.64017845 4208 Q8IX12-2;Q8IX12;A0A0C4DGG8;F5H2E6;F5H3E1;F5H1H2 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 0 0 0 1.33 0.471 2 1 43.899 43.94 2 3.0409E-09 11658 20230619_1881_Aki_TMTPro18x_K_F2 176.95 147.79 68863 54938 64136 78883 65347 76662 80098 82610 89794 84305 82626 86495 97491 82267 75216 100040 98215 107470 63629 50492 65666 77633 68224 77789 80204 84033 90651 85183 85771 87585 97991 85961 78284 100580 93813 101970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101400000 24017 4208 22548 45091;45092;45093 36302;36303 36303 2 9606 Homo sapiens -0.03813603218713979 SCCSCCPVGCAK Unmodified 1444.5026 0.50258081 410 Q8WVB5;Q8TDC4;CON__P67983;A0A140VJP8;A0A024R6T4;Q8N339;P80297;P13640-2;P04732;P02795;P13640 MT1X;MT1M;MT1G;MT1E;MT2A Metallothionein;Metallothionein-1M;Metallothionein-1X;Metallothionein-1G;Metallothionein-1E;Metallothionein-2 yes no 0 0 0 7.5 0.5 1 1 37.396 37.422 3 1.3135E-05 8247 20230619_1887_Aki_TMTPro18x_K_F7 131.83 127.28 + 50850 26970 60385 62323 99498 85053 78227 113460 88658 53307 89032 133430 93799 89385 51954 58025 126490 73375 46989 25012 61122 60303 99466 84894 80505 112230 89612 59491 91773 130160 93733 91886 57680 59704 119940 69724 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 103000000 24018 410 22549 45094;45095 36304;36305 36304 2 9606 Homo sapiens -0.20189037677255328 SCCTSVNEVICHGIPDR Unmodified 2002.8659 0.86591442 3642 P53582;Q5CZ91;H0Y955 METAP1;DKFZp781C0419 Methionine aminopeptidase 1 yes no 0 0 0 5 0 1 45.984 46.061 3 4.1384E-48 12063 20230619_1885_Aki_TMTPro18x_K_F5 271.82 261.27 26100 21547 25446 26823 24815 32914 27614 26034 34051 35771 32972 36697 40576 29632 31010 42133 43373 46799 24130 19770 25909 26729 25955 32650 27880 27335 34309 35661 34229 36964 40697 31493 32445 42359 41404 44388 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132640000 24019 3642 22550 45096 36306 36306 1 9606 Homo sapiens -0.09540390153279077 SCDFLSSFR Unmodified 1117.4862 0.48624399 69 A0A2R8YD12;A0A024QZX3;A0A024QZX5;A0A087X1N8;P35237;A0A2R8Y6A7 SERPINB6 Serpin B6 yes no 0 0 0 1 0 1 55.65 55.65 2 1.7788E-06 16671 20230619_1880_Aki_TMTPro18x_K_F1 190.73 117.48 152670 122900 151470 192470 196000 224640 201220 192080 218460 212500 188290 181680 241770 182660 190150 266800 227370 226840 141150 113070 154920 188890 200260 223850 203040 199040 220530 212800 196880 186030 242500 192920 196740 264280 217180 215880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76541000 24020 69 22551 45097 36307;36308 36308 2 9606 Homo sapiens -0.06779968193563946 SCDLALLETYCATPAK Unmodified 1811.8434 0.84337129 2090 B2MUX6;E3UN46;A8K6C9;P01344;P01344-2;P01344-3 IGF2 Insulin-like growth factor II;Insulin-like growth factor II;Insulin-like growth factor II Ala-25 Del;Preptin yes no 0 0 0 6.5 0.5 1 1 60.977 61.028 3 1.0591E-08 18219 20230619_1887_Aki_TMTPro18x_K_F7 141 110.01 57326 48328 57911 70189 72192 91430 67266 70183 106930 79568 89866 125330 79740 88572 109300 88407 100670 151840 53022 44413 59083 69301 73895 90298 69316 73434 105910 81366 92851 123750 83257 92541 110050 92443 96760 143350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113090000 24021 2090 22552 45098;45099 36309;36310 36310 2 9606 Homo sapiens -0.03007666279222576 SCDPGLEDPCGLNR Unmodified 1588.661 0.66099025 2082 A8K5Y7;Q9HAV4;B3KPQ5;B3KNC6;Q9H8N6;H0Y3Q8 XPO5 Exportin-5 yes no 0 0 0 2 0 1 44.104 44.187 2 8.9969E-16 11755 20230619_1881_Aki_TMTPro18x_K_F2 197.94 165.62 52563 46104 48038 45700 41365 53225 49810 52803 50769 60080 49302 52195 64544 47709 47213 76699 65491 60733 48591 42205 49068 46326 43785 53247 49790 54143 51689 60066 51330 53223 64542 50910 49485 75621 62452 57871 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83850000 24022 2082 22553 45100 36311 36311 1 9606 Homo sapiens -0.1097938090133539 SCEMGLQLR Unmodified 1092.5056 0.50559922 4560 Q9NPD3;A0A994J4D9;E9PI41 EXOSC4 Exosome complex component RRP41 yes no 0 0 0 6 0 1 45.399 45.485 2 0.018798 11884 20230619_1886_Aki_TMTPro18x_K_F6 78.113 63.337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24023 4560 22554 45101 36312 36312 1 9606 Homo sapiens -0.03695335174302272 SCENLAPFNTALK Unmodified 1463.7079 0.70786408 71 A0A024QZY1;Q13155;B2R7M3;Q13155-2;A8MU58 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes no 0 0 0 7.5 0.5 1 1 55.378 55.44 3 0.0016546 15961 20230619_1887_Aki_TMTPro18x_K_F7 76.728 62.822 48246 39634 48219 46180 43288 49889 50271 45498 49612 49808 47422 51380 57426 45290 53073 58233 57263 54812 44613 36343 48901 46164 45545 50071 50270 46920 50519 50156 49236 51882 58066 47614 54302 58107 54731 52106 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 298210000 24024 71 22555 45102;45103 36313 36313 1 9606 Homo sapiens -0.005441532878876387 SCESSMVLGYWDIR Acetyl (Protein N-term) 1743.7596 0.75964166 3483 Q6FGJ9;P21266;A4UJ43 GSTM3 Glutathione S-transferase Mu 3 no no 1 0 0 5 0 1 65.149 65.192 2 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8699200 24025 3483 22556 45104 0 9606 Homo sapiens -0.0824877765628571 SCFPSLFQAEQTHR Unmodified 1706.7835 0.78348864 1548 Q96TC9;B3KT30;A0A494C0D4;A0A494C146;B4DY76;P50336 PPOX Protoporphyrinogen oxidase yes no 0 0 0 1 0 1 50.835 50.835 3 4.0643E-07 14711 20230619_1880_Aki_TMTPro18x_K_F1 118.26 105.14 26389 25265 27512 26720 28686 32766 26007 28044 33594 20873 24123 15180 20858 18423 30762 20072 20836 24399 24435 23134 27864 26957 29651 32572 26622 28776 33373 21341 25012 15822 21860 18998 30502 20419 20056 23115 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36134000 24026 1548 22557 45105 36314 36314 1 9606 Homo sapiens -0.041631761076132534 SCGPASQSTLGLK Unmodified 1304.6395 0.63945017 2039 A8K4B4;Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YMD2 NUSAP1 Nucleolar and spindle-associated protein 1 yes no 0 0 0 1 0 1 45.812 45.812 3 7.0538E-05 12644 20230619_1880_Aki_TMTPro18x_K_F1 107.65 82.793 52422 40136 48844 50579 47678 58128 53085 49951 60749 52403 55936 50451 57873 49791 38043 64039 62359 49431 48426 36841 49914 50316 49821 58004 53449 51672 61239 52802 57634 51334 58093 52111 40515 63234 59340 47152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47931000 24027 2039 22558 45106 36315 36315 1 9606 Homo sapiens -0.0006839786776708934 SCGSLLPELK Unmodified 1102.5692 0.56924534 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 7.5 0.5 1 1 55.746 55.807 2 1.482E-05 15991 20230619_1888_Aki_TMTPro18x_K_F8 163.16 119.46 250650 194620 209710 233980 189970 243980 259120 233750 269150 288090 272830 289420 313650 265170 270470 337190 314380 338490 231390 178550 216350 233200 201080 245670 257520 241050 273920 288270 281660 292940 316800 278170 278590 337550 300540 321400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190230000 24028 1723 22559 45107;45108 36316;36317 36317 2 9606 Homo sapiens 0.022063485344233413 SCGSSTPDEFPTDIPGTK Unmodified 1894.8255 0.82547262 3571 P41091;H7BZU1 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 yes no 0 0 0 4 0.816 1 1 1 53.108 53.158 3 1.3634E-13 15559 20230619_1882_Aki_TMTPro18x_K_F3 146.2 135.57 185080 153150 184680 176600 146310 177530 198620 173200 212420 219370 216120 209030 247240 205320 217970 264970 237250 243050 171150 140420 187040 176520 156510 179370 197670 178560 215830 218950 222890 212650 249930 215080 223490 263950 226850 231060 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 712180000 24029 3571 22560 45109;45110;45111 36318;36319;36320 36318 3 9606 Homo sapiens -0.08614710000438208 SCGYSVR Unmodified 827.35959 0.35958691 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 6.5 1.12 1 1 1 1 31.579 31.633 2 0.0062045 6364 20230619_1886_Aki_TMTPro18x_K_F6 134.85 97.83 155510 72736 197010 178120 259660 279190 203080 256540 200740 136610 216190 235190 201320 194570 223480 90083 266600 213360 143730 67582 197480 172370 263030 273860 208190 260230 205000 147520 220650 232750 207180 196530 228450 99587 254300 201540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 314510000 24030 3811 22561 45112;45113;45114;45115 36321;36322;36323 36322 3 9606 Homo sapiens -0.060998496280149084 SCIILEFK Unmodified 1008.5314 0.53140327 3987 Q53F02;Q9UKF6;Q05BZ5 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes no 0 0 0 8 0 1 60.84 60.873 2 0.0080865 18131 20230619_1888_Aki_TMTPro18x_K_F8 105.57 61.121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24031 3987 22562 45116 36324 36324 1 9606 Homo sapiens 0.027478823396336338 SCILRPGGSEDASAMLR Oxidation (M) 1834.8666 0.86656635 3637 Q9BW75;Q96CV8;P52888;K7EP46;B4DU96;K7EL02;P52888-2 THOP1 Thimet oligopeptidase yes no 0 1 1 6.5 0.5 1 1 41.41 41.493 3 6.8892E-06 9892 20230619_1887_Aki_TMTPro18x_K_F7 98.573 83.372 45755 40305 41336 45872 47281 52263 53360 52057 54443 60572 55145 48543 51923 45444 47868 56457 55781 56558 42294 36941 42481 45962 48804 52369 53478 53411 55473 60381 56361 49733 52918 47572 49232 56537 53300 53715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78451000 24032 3637 22563 45117;45118 36325 36325 2329 1 9606 Homo sapiens -0.017472274419105815 SCILRPGGSEDASAMLR Unmodified 1818.8717 0.87165172 3637 Q9BW75;Q96CV8;P52888;K7EP46;B4DU96;K7EL02;P52888-2 THOP1 Thimet oligopeptidase yes no 0 0 1 8 0 1 46.678 46.726 3 9.0636E-14 12152 20230619_1888_Aki_TMTPro18x_K_F8 163.84 138.52 100290 87004 96150 102610 93466 116670 109000 116160 130420 118330 120840 118750 128180 114900 112080 149020 117810 129900 92740 79771 98037 102550 97854 116870 109690 118730 131250 119510 124730 120490 129870 120400 114790 148030 112750 123540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205330000 24033 3637 22563 45119 36326 36326 1 9606 Homo sapiens -0.005029235792790132 SCIMNSGASGSR Unmodified 1225.518 0.51795482 1645 A0A7I2V303;A0A7I2V3C1;A0A7I2V2E1;A0A7I2V3B5;F8WC54;A0A7I2YQ97;A0AVL1;A0A7I2V5N8;A0A7I2V3W3;A0A7I2V2Z6;A0A7I2V4B3;Q13443-2;Q13443 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 yes no 0 0 0 8 0 1 34.51 34.502 2 0.00068062 7286 20230619_1888_Aki_TMTPro18x_K_F8 116.55 109.34 10283 5639.5 7245.8 6867.8 10779 12389 12043 9913.5 14843 10742 13568 13495 14127 10974 12142 10024 16970 13892 9465.2 5183 7667.4 6907 10965 12050 12143 10321 14894 10907 14002 13485 14304 11363 12634 10313 16169 13165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6899900 24034 1645 22564 45120 36327 36327 1 9606 Homo sapiens -0.08578343501926611 SCINLPTVLPGSPSK Acetyl (Protein N-term) 1610.8338 0.83379288 1407 B5BU32;A0A384MDV9;K7ERV3;P04183;B5BUF9;K7ES52;K7ERJ1;K7ENW5 TK1 Thymidine kinase;Thymidine kinase, cytosolic yes no 1 0 0 1 0 1 62.971 62.971 3 0.0012167 19689 20230619_1880_Aki_TMTPro18x_K_F1 50.155 37.147 15844 14433 18012 14487 6819.3 11732 13762 15009 16726 17611 15077 12650 18760 13258 12568 19785 16929 14771 14677 13212 17931 14613 8186.3 12147 13583 15173 16813 17505 15683 13103 18721 14011 13168 19474 16140 14091 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59956000 24035 1407 22565 45121 36328 36328 1 9606 Homo sapiens 0.05280933497510887 SCLLLQFTDK Unmodified 1223.622 0.62200919 473;4277 A0A024R7V6;P61019;A0A0A1HAW1;E9PKL7;H0YD31;E9PE37;Q9UL31;H0YDL5;Q8WUD1;A0A3B3ITL1;Q5HYI5 RAB2;RAB2A;RAB2B;DKFZp313C1541 Ras-related protein Rab-2A;Ras-related protein Rab-2B no no 0 0 0 2 0 1 61.933 61.943 2 0.0016109 19460 20230619_1881_Aki_TMTPro18x_K_F2 104.43 78.813 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24036 473;4277 22566 45122 36329 36329 1 9606 Homo sapiens 0.019143065972457407 SCLPQIK Unmodified 844.44767 0.44767364 561 O75131;A0A024R994 CPNE3 Copine-3 yes no 0 0 0 2 0 1 47.009 47.085 3 0.009006 13124 20230619_1881_Aki_TMTPro18x_K_F2 94.407 0 58722 47751 54737 53853 62233 64072 67831 59824 78828 71400 81687 75305 75042 62396 60867 87612 86488 90784 54266 43774 56043 54039 64180 63946 68387 61735 79759 71678 83318 75889 76142 66135 63709 87722 82533 86178 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84452000 24037 561 22567 45123 36330 36330 1 9606 Homo sapiens 0.019227709625852185 SCMLTGTPESVQSAK Oxidation (M) 1610.728 0.72800718 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 1 0 6 0.816 1 1 1 43.594 43.68 3 1.4389E-10 11055 20230619_1886_Aki_TMTPro18x_K_F6 146.77 118.47 102430 83131 87777 107860 97926 100750 97355 95557 107630 97494 112820 86374 111140 97091 98817 132990 112110 102470 94595 76312 90641 106770 100880 102320 98531 98072 109240 98137 115250 88759 112930 101650 101630 131260 107070 97682 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 598470000 24038 2644;4322 22568 45124;45125;45126 36331;36332;36333 36332 1601 3 9606 Homo sapiens -0.052927704102785356 SCMLTGTPESVQSAK Unmodified 1594.7331 0.73309256 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 7 0.816 1 1 1 48.002 48.077 3 1.6049E-12 12693 20230619_1888_Aki_TMTPro18x_K_F8 169.79 145.84 485810 360780 431790 508710 388450 471790 480780 498590 385490 457120 494700 489050 557270 453860 431810 642990 567380 502490 448540 331610 442980 500940 409550 480250 476770 506520 402770 464890 505100 494370 560760 479160 449930 634620 541110 478990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 841800000 24039 2644;4322 22568 45127;45128;45129 36334;36335 36335 2 9606 Homo sapiens -0.04048466547646967 SCMNQVTISTTDRR Oxidation (M) 1683.7669 0.7668523 2586 E7EPP6;B4DT73;O14757-2;O14757 CHEK1 Serine/threonine-protein kinase Chk1 yes no 0 1 1 7.5 0.5 1 1 31.97 32.019 3 2.0937E-05 6122 20230619_1887_Aki_TMTPro18x_K_F7 121.66 111 12823 13386 16611 14041 18664 18517 13805 16652 18820 17777 19112 17407 17986 16106 15242 21139 19049 17280 11907 12253 16567 14197 19077 18354 14373 17157 18906 17898 19529 17659 18271 16913 15790 20930 18176 16460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19522000 24040 2586 22569 45130;45131 36336 36336 1565 1 9606 Homo sapiens -0.04768045055902803 SCNCLLLK Unmodified 1006.494 0.49397191 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2;A4QMW8 ENO1 Alpha-enolase;Enolase yes no 0 0 0 2 0.816 2 2 2 49.768 49.812 2;3 0.0017836 14278 20230619_1880_Aki_TMTPro18x_K_F1 151.04 94.914 1142600 902720 1054200 1037900 1220500 1518600 1284400 1034300 1443300 616190 492010 393070 425790 382140 868410 438920 546920 458580 1055600 827770 1081000 1043200 1258000 1487600 1294900 1079500 1421100 640580 547080 409200 458070 397770 855100 442660 525780 435670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 9326200000 24041 293 22570 45132;45133;45134;45135;45136;45137 36337;36338;36339 36337 3 9606 Homo sapiens -0.009015321976221458 SCPDAIK Unmodified 789.36909 0.36908897 810 B4DPP0;A6NNI4;A0A2R8Y478;A0A7I2V3T7;G8JLH6;A0A087WU13;F5GXT1;P21926 CD9 Tetraspanin;CD9 antigen yes no 0 0 0 4 0 1 38.655 38.698 2 0.020932 9010 20230619_1883_Aki_TMTPro18x_K_F4 93.262 43.223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24042 810 22571 45138 36340 36340 1 9606 Homo sapiens -0.034020813425058805 SCPELTSGPR Unmodified 1102.5077 0.50770771 2858 D6W625;Q13111-3;Q13111;Q13111-2 CHAF1A Chromatin assembly factor 1 subunit A yes no 0 0 0 4 0 1 36.533 36.579 2 1.3613E-09 8156 20230619_1883_Aki_TMTPro18x_K_F4 207.29 154.6 49219 37620 50541 51353 53588 58462 50673 53360 60787 56701 66361 57016 67309 52779 52427 55682 65461 52646 45503 34561 51276 50817 55348 58453 51604 54947 61565 57149 67779 57753 67930 54753 54304 55742 62418 50082 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42228000 24043 2858 22572 45139 36341 36341 1 9606 Homo sapiens -0.03944583164843607 SCPNPGEIR Unmodified 1028.4709 0.47092828 1258 Q8TD12;A0A8Q3WLV2;H3BLV0;A0A8Q3SI94;B4DUF2;A0A8Q3SI51;B2R658;A0A172WBW8;B1AP15;A0A8Q3WKT6;Q8TD11;Q8TD13;B1AP13;P08174-2;P08174-6;P08174-3;P08174-5;P08174;P08174-4;P08174-7 CD55 Complement decay-accelerating factor yes no 0 0 0 4 0 1 34.352 34.402 2 0.0043765 7292 20230619_1883_Aki_TMTPro18x_K_F4 91.069 50.148 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24044 1258 22573 45140 36342 36342 1 9606 Homo sapiens -0.04216834990734242 SCPSFSASSEGTR Unmodified 1371.5725 0.57249282 2847 D6RCP9;F5CTF3;D6RFG8;P27707;D6RG38 DCK Deoxycytidine kinase yes no 0 0 0 4.5 0.5 1 1 36.744 36.79 2 2.6803E-19 8235 20230619_1885_Aki_TMTPro18x_K_F5 204.69 159.61 27397 21806 28259 24605 26640 30363 31374 27126 27546 27377 28920 21827 28229 22112 23686 21321 25907 21829 25335 19991 28591 24709 27915 30195 31243 27948 28335 27490 29529 22434 28600 22775 24272 21480 24738 20743 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17911000 24045 2847 22574 45141;45142 36343;36344 36344 2 9606 Homo sapiens -0.09843053149506886 SCQFVAVR Unmodified 965.47529 0.47528537 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 5.33 3.09 1 1 1 40.452 40.472 2 0.0039506 9675 20230619_1888_Aki_TMTPro18x_K_F8 134.08 110.51 565440 481350 475670 521930 631980 712350 611580 601470 780120 256180 252930 207460 198920 171550 435880 259230 280600 166560 522290 441020 493340 526310 644140 703340 622490 612860 762510 277000 282130 212150 216180 182650 429480 254510 269190 159600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 409720000 24046 3402 22575 45143;45144;45145 36345;36346 36346 2 9606 Homo sapiens -0.0088332577716983 SCSGVEFSTSGSSNTDTGK Unmodified 1906.7851 0.78506437 62 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;P45880-2;P45880-1;Q5JSD2;Q5JSD1;A2A3S1 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 4.33 0.471 2 1 43.465 43.522 2;3 8.826599999999999E-40 10997 20230619_1885_Aki_TMTPro18x_K_F5 260.56 249.51 65506 59107 74545 89041 92868 98682 97395 107810 116140 92283 106370 105190 116740 97591 88967 114120 113710 92893 60680 54330 75347 87546 95093 99227 98519 109060 116790 94518 110010 106010 117510 101750 92452 113180 108410 88531 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2431200000 24047 62 22576 45146;45147;45148 36347;36348 36348 2 9606 Homo sapiens -0.13205676390839471 SCSPELQQK Unmodified 1075.4968 0.49680868 1468 A0A384NL53;P16152 CBR1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 4.5 0.5 1 1 38.323 38.39 2 0.00065024 8860 20230619_1885_Aki_TMTPro18x_K_F5 144.12 111.77 79368 46133 102120 98226 160040 189150 113940 152810 128090 103780 156980 192150 140790 150370 152920 70397 180240 179220 73431 42699 102700 95985 160470 183350 118130 157150 130750 110220 159270 189390 144990 152220 156310 78418 172180 169070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69745000 24048 1468 22577 45149;45150 36349;36350 36350 2 9606 Homo sapiens -0.037919855391237434 SCTEGKGEYTMEYSR Oxidation (M) 1812.7295 0.72946374 2867;2868 E5KND5;Q96RP9;Q96RP9-2;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 1 1 4 0 1 37.288 37.332 3 0.019177 8465 20230619_1883_Aki_TMTPro18x_K_F4 63.727 54.443 40126 40391 40612 44390 54209 44424 50434 52985 38516 50158 55459 41493 50267 37297 56807 42508 38753 27289 37161 36991 41425 44526 54965 45171 50729 53446 40641 50530 55809 42417 51701 38894 56571 41844 37174 26123 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43502000 24049 2867;2868 22578 45151 36351 36351 1704 1 9606 Homo sapiens -0.14439181112152255 SCTEGKGEYTMEYSR Unmodified 1796.7345 0.73454912 2867;2868 E5KND5;Q96RP9;Q96RP9-2;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 1 4 0 1 40.522 40.565 3 3.3574E-11 9784 20230619_1883_Aki_TMTPro18x_K_F4 166.92 158.93 55959 54643 61497 60239 62018 59362 73325 69713 55190 92668 84093 68122 73397 53197 76604 65169 61297 47214 51849 50050 62009 60409 64528 60381 72749 71101 58561 91566 84368 69746 75292 56036 76929 64348 58699 45086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58512000 24050 2867;2868 22578 45152 36352 36352 1 9606 Homo sapiens -0.13194877249520687 SCTPSPDQISHR Unmodified 1383.6201 0.62011171 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;A0A7P0T8C6;Q7Z2W4-3 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 0 4.5 0.5 1 1 32.506 32.576 3 3.2704E-06 6628 20230619_1885_Aki_TMTPro18x_K_F5 142.76 129.36 21732 11541 15179 22256 24589 23971 21315 19994 24809 24906 23065 22689 21558 18914 20869 20533 26557 24669 20000 10670 16144 21584 24705 24011 21778 20839 25024 24844 23679 22992 22029 19729 21544 20841 25342 23394 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22433000 24051 2740 22579 45153;45154 36353 36353 1 9606 Homo sapiens -0.05635354158653172 SCTTDVRPISGSR Unmodified 1434.6885 0.68852563 727 A2AE50;Q5SPU2;A0A0G2JIW2;A2AE48;A0A1U9X8Q1;A0A1U9X8P6;A0A024RCP3;Q12899 TRIM26 Tripartite motif-containing protein 26 yes no 0 0 1 7.5 0.5 1 1 31.809 31.858 3 0.00015966 6068 20230619_1887_Aki_TMTPro18x_K_F7 89.44 82.712 22864 15525 20349 20960 25852 28959 25298 27124 37240 22645 26804 28191 27213 21991 22887 27714 38044 29460 21100 14269 20968 20822 26435 28624 25899 27706 36794 23323 28010 28166 27573 23194 24207 27841 36195 27994 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11687000 24052 727 22580 45155;45156 36354 36354 1 9606 Homo sapiens -0.011431095788111634 SCTTESCDFVR Unmodified 1360.5387 0.53874985 337 A0A024R5F4;P50416;B2RAQ8;P50416-2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 0 2.5 0.5 1 1 38.727 38.787 2 3.1222E-24 9081 20230619_1882_Aki_TMTPro18x_K_F3 266.54 232.46 158840 126590 149170 162260 274600 316370 305450 297000 375620 174980 168210 191500 214060 153310 165450 243840 213040 217080 146780 116200 154450 162910 276310 307610 307920 301300 369830 184260 184480 192550 214680 164270 172160 241820 203400 206460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 291000000 24053 337 22581 45157;45158 36355;36356 36356 2 9606 Homo sapiens -0.1270979791290756 SCTVSINFGPCFK Unmodified 1515.685 0.68502015 2095 A8K6T5;Q9UBL3-3;Q9UBL3;F5H8F7;B4DPT1;H0YBF6;B4DEM3;H0YAQ0 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes no 0 0 0 3.5 0.5 1 1 59.463 59.479 3 0.030487 18149 20230619_1883_Aki_TMTPro18x_K_F4 50.46 38.294 41045 33438 36742 38237 31872 38378 36690 41614 44349 41930 38356 36946 43898 35743 43030 48637 43364 42957 37920 30656 37617 38240 33668 38871 36974 42282 44520 42208 39877 37717 44579 37597 43821 48334 41484 40862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92844000 24054 2095 22582 45159;45160 36357 36357 1 9606 Homo sapiens -0.05219495677033592 SCVEEPEPEPEAAEGDGDK Unmodified 2043.8215 0.82150945 2314 B2RDE8;A0A384NPW1;P51858;A8K8G0;B7Z958;B7Z525;P51858-2;P51858-3 HDGF Hepatoma-derived growth factor yes no 0 0 0 1 0 1 43.907 43.907 3 8.561800000000001E-25 11809 20230619_1880_Aki_TMTPro18x_K_F1 205.78 202.68 327940 228550 265930 388320 307430 463430 334270 373370 505770 428990 428440 585890 585510 479900 282860 697770 627600 666160 302480 210620 276830 379470 318250 460260 340730 389150 502440 435590 450670 584000 578530 509920 314290 694570 597410 632910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 820680000 24055 2314 22583 45161 36358 36358 1 9606 Homo sapiens -0.15864844284760693 SCVEEPEPEPEAAEGDGDKK Unmodified 2171.9165 0.91647247 2314 B2RDE8;A0A384NPW1;P51858;A8K8G0;B7Z958;B7Z525;P51858-2;P51858-3 HDGF Hepatoma-derived growth factor yes no 0 0 1 2 0.816 2 2 2 42.342 42.389 3;4 5.065E-12 11129 20230619_1880_Aki_TMTPro18x_K_F1 142.97 128.96 308230 235800 249140 295490 293010 354950 322790 318280 403980 374520 391420 400860 434560 359240 296250 483290 474530 417150 284440 216430 259000 294200 302200 353480 326160 329180 406440 376420 403930 404520 435700 378410 314530 479400 451910 397120 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1354800000 24056 2314 22584 45162;45163;45164;45165;45166;45167 36359;36360;36361;36362 36360 4 9606 Homo sapiens -0.1226091081357481 SCVGETTESTQCEDEELEHLR Unmodified 2508.0381 0.038060943 1799 B4E3S6;A0A8Q3SIM0;B2R6W1;P10643 C7 Complement component C7 yes no 0 0 0 1 0 1 45.238 45.238 3 4.6262E-55 12412 20230619_1880_Aki_TMTPro18x_K_F1 271.31 257 6936.2 5189 7635.3 15089 21689 26827 28549 32288 37137 13228 9639.5 11428 18449 10028 12405 15115 11215 13252 6415.6 4827.3 7976.9 14549 21628 26317 28601 32063 36182 14370 11579 11652 18234 10685 12670 14995 10756 12599 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65776000 24057 1799 22585 45168 36363;36364 36363 2 9606 Homo sapiens -0.15563656513313617 SCVIVLR Unmodified 845.47931 0.47930812 1133 A0A0S2Z5K8;V9HWK4;Q96SI9-2;Q96SI9 HEL162;STRBP Spermatid perinuclear RNA-binding protein yes no 0 0 0 1.5 0.5 1 1 44.025 44.067 2 0.012973 11681 20230619_1881_Aki_TMTPro18x_K_F2 114.59 0 1222300 910120 1056400 963490 957270 1022400 1131000 1008500 1151500 1472500 1198800 1076000 1652900 1236600 795790 1770300 1715700 1561400 1128300 834130 1084800 970240 1006800 1029700 1131100 1043600 1176300 1451100 1245700 1116800 1631700 1299500 880340 1755600 1631600 1485800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1132000000 24058 1133 22586 45169;45170 36365;36366 36366 2 9606 Homo sapiens 0.05038763716538597 SCVPLNTNELNSNENIHYK Unmodified 2245.0433 0.043344738 2413 B3KX64;B3KTI4;Q08AD1-2;Q08AD1-3;Q08AD1 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 yes no 0 0 0 6 0 1 48.739 48.818 3 2.2829E-19 13379 20230619_1886_Aki_TMTPro18x_K_F6 170.16 157.61 20641 17699 22429 25587 16193 18946 22634 20612 20414 25822 27398 24680 27402 19943 19940 30222 26530 29817 19106 16263 22562 25097 17478 19695 22393 21102 21216 25765 27755 24965 27591 21290 20830 30146 25343 28313 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38578000 24059 2413 22587 45171 36367 36367 1 9606 Homo sapiens -0.02937520077875888 SCYDLSCHAR Unmodified 1267.5074 0.50739014 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4;A0A6Q8PHI7;H7C443;A0A6Q8PFZ6 GARS Glycine--tRNA ligase yes no 0 0 0 5.5 0.5 1 1 33.226 33.288 3 1.3559E-27 6883 20230619_1885_Aki_TMTPro18x_K_F5 245.5 236.99 37761 28089 38312 42914 48410 49759 42600 43773 49344 39181 47400 54896 43440 37015 46082 36486 50635 50085 34901 25843 39045 42182 49305 49650 43505 45020 49778 40329 48611 54366 44591 38751 47008 37469 48400 47429 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61075000 24060 3576 22588 45172;45173 36368;36369 36368 2 9606 Homo sapiens -0.11566326156366813 SCYEDGWLIK Unmodified 1269.57 0.56997362 1323 A0A1W2PQV2;H3BUH9;Q6QN92;Q6IAT2;Q53XL7;P23434 GCSH Glycine cleavage system H protein, mitochondrial yes no 0 0 0 6 0.816 1 1 1 58.176 58.235 3 0.00046428 17177 20230619_1885_Aki_TMTPro18x_K_F5 104.05 70.162 148400 124440 130100 139910 124610 150650 157720 156390 169830 186370 193230 195410 185330 181400 190260 201550 210630 226990 137110 114060 133690 140220 130900 151660 157510 160160 173310 186980 196860 197480 189810 188590 194580 203610 201450 215260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 288610000 24061 1323 22589 45174;45175;45176 36370;36371 36370 2 9606 Homo sapiens -0.05402856816522217 SDAAVDTSSEITTK Acetyl (Protein N-term) 1465.6784 0.67839767 2720 P06454-2;Q8TBK9;P06454;B8ZZQ6;Q53S24;Q15202;V9HVW6;Q15204;Q86YS2;Q7KZ52;Q15203 PTMA;PTMAP7 Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 yes no 1 0 0 3.9 2.39 2 2 1 1 1 1 1 1 49.099 49.153 2 1.5689999999999999E-28 13352 20230619_1885_Aki_TMTPro18x_K_F5 155.15 148.3 5675000 4551800 5732500 6492600 6374700 7847500 6930700 7049900 7184100 8562400 9321900 9357200 8266700 6954200 7349100 10065000 11227000 9785500 5247300 4183000 5834300 6411700 6590700 7810100 6966000 7296800 7394000 8592300 9416500 9383800 8430300 7416400 7717800 10040000 10694000 9302600 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 68453000000 24062 2720 22590 45177;45178;45179;45180;45181;45182;45183;45184;45185;45186 36372;36373;36374;36375;36376;36377;36378;36379;36380;36381 36378 10 9606 Homo sapiens -0.03581438823039207 SDADSGFLGLRPTSVDPALR Unmodified 2073.0491 0.049082043 2551 B4DVK1;B4E013;B4DND9;Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein yes no 0 0 1 6.5 0.5 1 1 56.631 56.696 3 7.0167E-05 16439 20230619_1887_Aki_TMTPro18x_K_F7 85.945 62.145 53512 50288 55778 56762 45149 49031 55291 57676 54338 60456 69308 66606 67418 58605 60751 63594 59484 62047 49544 46076 56316 56725 47981 50387 55179 58410 56015 61106 70304 67077 68540 60966 61841 63743 56944 58940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 312220000 24063 2551 22591 45187;45188 36382 36382 1 9606 Homo sapiens 0.055479464960171754 SDAEDGEGTVASWELR Unmodified 1720.754 0.75402223 119 Q96GM5;A0A024R102;A0A024R137;Q96GM5-2;B4DF50 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 0 0 0 1 0 1 52.125 52.125 3 8.2096E-20 15247 20230619_1880_Aki_TMTPro18x_K_F1 155.03 143.41 50418 38863 46773 42194 41891 55347 51167 53285 62598 58794 51238 65918 61614 53416 69093 58071 63015 61327 46576 35621 47728 42541 44244 54908 51412 54704 62692 59343 53691 66097 62917 55754 69726 58508 60339 58220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101730000 24064 119 22592 45189 36383 36383 1 9606 Homo sapiens -0.07752461642758135 SDAEEDGGTVSQEEEDRKPK Unmodified 2204.9669 0.96692814 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;P27824-3;D6RGY2;A0A7P0Z484 CANX Calnexin yes no 0 0 2 2.5 0.5 1 1 37.034 37.091 4 1.9452E-16 8546 20230619_1881_Aki_TMTPro18x_K_F2 165.74 157.14 21706 12605 16624 20279 25903 30714 22888 28013 46171 25715 37818 50133 36518 42261 27833 64409 73888 91884 19996 11618 17474 19967 26171 30181 23961 28730 45296 26902 39196 49562 37049 45001 31206 65762 70375 86914 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116040000 24065 1700 22593 45190;45191 36384;36385 36384 2 9606 Homo sapiens -0.0873566516424944 SDAGLESDTAMK Oxidation (M) 1239.5289 0.52889667 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q3SWU7 DDX21 Nucleolar RNA helicase 2 yes no 0 1 0 2 0 1 40.347 40.421 3 0.0011856 10012 20230619_1881_Aki_TMTPro18x_K_F2 82.505 66.28 66164 39439 62357 74021 72110 86627 77304 77935 96050 71945 89182 99160 103910 78733 86528 96167 98428 96267 61047 36424 63893 71995 74359 86358 78211 80076 96428 73904 92523 98751 104710 82829 89000 96342 94046 91442 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 248220000 24066 1748 22594 45192 36386 36386 1144 1 9606 Homo sapiens -0.08128662646663543 SDALETLGFLNHYQMK Oxidation (M) 1881.8931 0.89309867 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;M0QYT0;M0R076;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 1 0 4.5 3.5 1 1 60.309 60.327 3;4 6.1153E-11 18604 20230619_1880_Aki_TMTPro18x_K_F1 157.2 140.77 150710 123030 141140 169630 152690 148600 170130 166760 155360 176620 183560 180340 203740 156610 182300 207130 182800 193610 139280 113010 144500 167160 157940 152300 170110 169430 160360 177980 187890 182180 206130 165060 185920 206510 174970 184000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 418960000 24067 1455;1520 22595 45193;45194 36387;36388 36387 961 2 9606 Homo sapiens -0.012572152789061875 SDALETLGFLNHYQMK Unmodified 1865.8982 0.89818405 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;M0QYT0;M0R076;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 0 0 1.5 0.5 1 1 61.761 61.766 3 6.9179E-34 19198 20230619_1880_Aki_TMTPro18x_K_F1 254.2 207.88 448200 390240 444050 486700 327490 484590 487380 488780 501190 593850 561310 594140 651700 565580 582100 660720 624730 690700 414570 357990 450120 483570 354560 489970 482770 501900 512660 594370 577320 602090 659020 589420 595950 663890 597780 655470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 361640000 24068 1455;1520 22595 45195;45196 36389;36390 36389 2 9606 Homo sapiens -0.00012911416297356482 SDASGTNDFR Unmodified 1068.4472 0.44721595 4302 Q92626;Q96GF5 PXDN Peroxidasin homolog yes no 0 0 0 2 0 1 33.132 33.19 2 0.0069156 6945 20230619_1881_Aki_TMTPro18x_K_F2 85.862 57.35 9358.9 4848.6 13319 14834 27002 28489 21763 21989 26251 13471 24424 33592 19296 19040 25765 11253 29090 27757 8664.4 4524.2 13419 14308 26807 27598 22372 22683 26358 14699 24995 32648 20186 19703 26186 12407 27792 26194 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17487000 24069 4302 22596 45197 36391 36391 1 9606 Homo sapiens -0.08426977223575705 SDASPSSIR Unmodified 918.44067 0.44067401 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B4DVK5;B1AHA9 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 3 0.816 1 1 1 31.302 31.373 2 0.00010499 6097 20230619_1882_Aki_TMTPro18x_K_F3 180.34 98.038 89451 51732 102480 102910 137920 164790 105510 140400 132060 95901 130890 150600 120020 110940 145970 65342 142840 117370 82661 47829 103560 100420 139700 161220 109200 143800 132860 101000 134060 148900 124110 113330 147330 69603 136520 111020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 124620000 24070 2188 22597 45198;45199;45200 36392;36393;36394 36393 3 9606 Homo sapiens -0.021808703842793875 SDAYYCTGDVTAWTK Unmodified 1736.7352 0.73520105 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 6 0.816 1 1 1 56.447 56.512 3 1.5654E-10 16666 20230619_1886_Aki_TMTPro18x_K_F6 150.57 139.91 641400 509460 646160 553090 392360 712100 543550 560010 516200 784230 684550 687210 757170 727360 734640 815090 849070 827050 593020 466910 651880 557390 433760 704000 539170 588390 535400 777350 697810 703270 770030 753410 754170 818160 811130 785490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2661900000 24071 261 22598 45201;45202;45203 36395;36396 36395 2 9606 Homo sapiens -0.10369714538182961 SDDDGFEIVPIEDPAK Unmodified 1745.7996 0.79957544 2518 B4DKU3;Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 yes no 0 0 0 1 0 1 61.732 61.732 3 0.00055911 19196 20230619_1880_Aki_TMTPro18x_K_F1 76.151 64.235 38946 34177 34139 44133 47080 42628 51902 51318 54313 44033 47087 41794 55461 42411 49519 49412 40110 46830 35992 31363 35333 43726 47935 43438 52102 51633 54885 44834 48989 42593 56008 44122 49941 49404 38514 44482 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105790000 24072 2518 22599 45204 36397 36397 1 9606 Homo sapiens -0.04349236180337357 SDDILEEGEK Unmodified 1133.5088 0.50881315 2240 B4DXX1;B2R713;Q7Z2T5;Q7Z2T5-2 TRMT1L TRMT1-like protein yes no 0 0 0 1 0 1 47.924 47.924 2 0.00020988 13501 20230619_1880_Aki_TMTPro18x_K_F1 120.68 88.922 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24073 2240 22600 45205 36398 36398 1 9606 Homo sapiens -0.05260090314959598 SDDNRESLEK Unmodified 1191.5368 0.53675924 1828 A0A8V8TMN5;P30085;P30085-3;A0A494BXC7;P30085-2 CMPK1 UMP-CMP kinase yes no 0 0 1 1.5 0.5 1 1 33.984 34.012 3 0.045331 7307 20230619_1881_Aki_TMTPro18x_K_F2 53.569 27.526 23113 13444 30985 33876 46964 48519 39134 46321 41157 30031 43643 46255 41044 38929 40177 24685 48000 40633 21394 12482 31078 32679 47254 47857 39991 47011 41869 31725 44570 45951 41961 39638 41209 25989 45799 38452 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50540000 24074 1828 22601 45206;45207 36399 36399 1 9606 Homo sapiens -0.05134767334857315 SDDSVIQLLNPNR Unmodified 1469.7474 0.74742071 891 Q9BY67-3;Q9BY67-4;X5D7A8;Q9BY67;Q9BY67-5;X5DNF2;X5DQR8;X5DQS5;X5D8W0;A0A087X1W8;A0A0A0MTJ8;A0A4Z1;A0A087X0T8;Q9BY67-2;H0YG94;F5H125 CADM1 Cell adhesion molecule 1 yes no 0 0 0 5.5 0.5 1 1 59.813 59.87 2 3.433E-45 18066 20230619_1886_Aki_TMTPro18x_K_F6 294.13 247.71 171250 120720 141780 181140 135400 176900 155850 152670 207860 175360 135960 146690 227450 149280 126390 274480 192440 214630 157980 111070 146640 177760 142080 178520 157520 158310 206040 175270 146840 150520 224250 160670 134770 269960 183640 204410 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 163460000 24075 891 22602 45208;45209 36400;36401;36402 36402 3 9606 Homo sapiens 0.0313368998720307 SDEAVKPFGLK Unmodified 1189.6343 0.63428844 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 1 8 0 1 49.678 49.75 3 0.023923 13486 20230619_1888_Aki_TMTPro18x_K_F8 62.466 43.786 140400 134070 141150 121230 116530 131180 130780 125700 134740 179410 181440 131230 154690 122980 180410 167700 165990 130100 129970 122610 142820 123790 123380 131890 131270 130200 139060 176900 182510 135280 159850 129520 182120 165760 158710 124100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1850899999.9999998 24076 3606 22603 45210 36403 36403 1 9606 Homo sapiens 0.04705666331938119 SDEDDWSK Unmodified 980.37232 0.37231967 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;B4DLU5;A0A2R8YDH3;B4E3C4;A0A2R8Y650;A0A2R8YCU0 DDX3X ATP-dependent RNA helicase DDX3X yes no 0 0 0 1 0 1 43.223 43.223 2 0.0018381 11529 20230619_1880_Aki_TMTPro18x_K_F1 136.27 99.681 49732 32419 48663 54555 48061 81942 44383 58119 97909 59508 68621 117430 131340 118600 47060 70358 197970 170010 45919 29881 49574 53568 50224 80114 46632 61040 95474 61970 74725 116410 128290 119850 57747 76977 187760 160530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31357000 24077 1018 22604 45211 36404 36404 1 9606 Homo sapiens -0.11865159754802335 SDEDEERVHEEL Unmodified 1485.6219 0.62194543 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;H0Y827;Q96AY3-2 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 0 1 1 0 1 37.183 37.183 3 2.2928E-06 8845 20230619_1880_Aki_TMTPro18x_K_F1 144.51 133.73 68743 49789 58200 51961 63507 81126 70887 74136 119480 87099 91814 154410 131650 133760 78716 178330 194740 277470 63438 45632 60060 52719 65956 79646 72512 76552 117800 89470 97592 152930 130910 141040 87953 183640 185780 262180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 259300000 24078 167 22605 45212 36405 36405 1 9606 Homo sapiens -0.10144066659700002 SDEDKDKEGEALEVK Unmodified 1690.7897 0.78973904 2627 B4DZ87;O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 2 2 0 1 43.697 43.779 4 0.00067834 11578 20230619_1881_Aki_TMTPro18x_K_F2 88.561 70.861 246210 211550 235220 251300 302920 242220 309330 304030 280380 265950 317960 225310 229820 170780 315480 173230 200720 107190 227650 193980 240890 250520 308600 247310 310630 305290 288630 269440 320170 228910 241050 178120 312150 170910 192510 102850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184890000 24079 2627 22606 45213 36406 36406 1 9606 Homo sapiens -0.028024241857337984 SDEFSLADALPEHSPAK Acetyl (Protein N-term) 1854.8636 0.86357268 4251 Q8NDC0 MAPK1IP1L MAPK-interacting and spindle-stabilizing protein-like yes yes 1 0 0 3 0.816 1 1 1 59.342 59.357 3 7.811299999999999E-19 18305 20230619_1881_Aki_TMTPro18x_K_F2 115.38 95.003 74612 62646 74302 75824 70406 81267 79778 82459 86423 84662 81169 81765 92169 75481 83417 104680 89333 99573 69001 57459 75459 75581 73716 81788 80127 84207 87488 85353 84021 82974 93292 79625 85428 104370 85487 94591 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 160020000 24080 4251 22607 45214;45215;45216 36407;36408 36407 2 9606 Homo sapiens -0.029664560234095916 SDEGHPFR Unmodified 943.41479 0.41479361 4571 Q9NQC3;Q9NQC3-2;Q9NQC3-5;Q9NQC3-4;Q6IPN0;Q3LIF4;Q9NQC3-6;A0A0U1RQR6;Q53SY1;A6XGP7;H7C106;D6W5C2;Q9NQC3-3 RTN4;Nbla00271;NOGOC Reticulon-4;Reticulon yes no 0 0 0 3.5 1.71 1 1 1 1 1 1 28.469 28.529 3 0.00065613 5305 20230619_1886_Aki_TMTPro18x_K_F6 116.37 80.491 65051 51030 60896 69674 79707 80138 82979 76043 112050 73860 85985 96893 86737 75999 83862 80137 107290 90531 60104 46876 62543 68944 81383 80152 84309 77942 111330 75542 89553 96568 88421 79287 86587 81069 102310 85938 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 224440000 24081 4571 22608 45217;45218;45219;45220;45221;45222 36409;36410;36411 36411 3 9606 Homo sapiens -0.0591771983590661 SDEISFADFK Unmodified 1157.5241 0.52406928 2723 B9A6J2;Q15042;Q15042-3;A0A8J9AUI2;Q15042-4;A0A8I5KRH8 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes no 0 0 0 3.5 0.5 1 1 60.016 60.032 3 0.0001232 18312 20230619_1883_Aki_TMTPro18x_K_F4 125.75 90.205 58993 46376 56138 61432 50653 54680 58246 54830 58645 65516 68822 65715 79255 64196 77570 78891 78654 81763 54514 42587 57209 60707 53237 55813 58325 56322 60168 65638 70589 66688 80449 67073 78974 79198 75267 77617 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42602000 24082 2723 22609 45223;45224 36412;36413 36413 2 9606 Homo sapiens -0.04839178727115723 SDEMNVK Unmodified 821.35892 0.35891821 2989 F8W1R7;P60660-2;P60660;G3V1V0;B7Z6Z4;J3KND3;G8JLA2;F8VPF3;Q6IBG5 MYL6 Myosin light polypeptide 6 yes no 0 0 0 3 0 1 39.546 39.6 2 0.016368 9420 20230619_1882_Aki_TMTPro18x_K_F3 98.299 51.232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24083 2989 22610 45225 36414 36414 1 9606 Homo sapiens -0.05890689067734911 SDERPVHIK Unmodified 1079.5724 0.57235688 89 H0Y612;A0A024R0F6;Q9UPN9-2;Q9UPN9;B4DXI9;B3KN30 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 0 0 1 5.5 0.5 1 1 32.576 32.635 4 0.038259 6634 20230619_1885_Aki_TMTPro18x_K_F5 57.347 30.749 91914 75600 90761 89095 123870 110080 90643 100240 120210 90104 118860 109760 92986 76141 77337 89102 126010 116880 84985 69328 92728 89164 125000 109580 94281 102790 120620 92240 120770 109430 95011 80382 81663 90843 120030 110750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49293000 24084 89 22612 45226;45227 36415 36415 1 9606 Homo sapiens 0.035753597034727136 SDEVTQEISDETR Unmodified 1507.6638 0.66381024 1728 B2R928;A0A804HIS2;Q9Y4K4;B3KWC4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 5 yes no 0 0 0 1 0 1 45.301 45.301 2 1.6995E-21 12423 20230619_1880_Aki_TMTPro18x_K_F1 278.79 259.01 30125 24355 28090 30668 28870 31335 30315 30661 37964 33330 39281 41244 42329 37201 31182 44122 42374 43420 27838 22351 28729 30460 29977 31623 30726 31450 38278 33794 40371 41387 42592 38859 32593 44151 40442 41244 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51681000 24085 1728 22613 45228 36416 36416 1 9606 Homo sapiens -0.06971510971175121 SDEWFAK Unmodified 881.39193 0.3919329 2121 B4DX01;A8K8F0;Q9HC38-2;Q9Y3E8;Q9HC38;I3L3Q4;B3KV49;B7Z403;I3L1I0 GLOD4 Glyoxalase domain-containing protein 4 yes no 0 0 0 4 0 1 52.742 52.766 2 0.012363 15247 20230619_1883_Aki_TMTPro18x_K_F4 102.72 45.616 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24086 2121 22614 45229 36417 36417 1 9606 Homo sapiens -0.05350738953382006 SDFDEFER Acetyl (Protein N-term) 1085.4302 0.4301689 2658 B5BU25;P26368-2;P26368;K7ELP8 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 1 0 0 1 0 2 53.012 53.012 1;2 2.6511E-05 15585 20230619_1880_Aki_TMTPro18x_K_F1 116.88 112.77 15709 14449 17698 15791 16836 16621 15874 17595 23560 15185 13995 14258 11541 11321 18239 14303 13630 15040 14552 13236 17783 15861 17524 16777 16303 17838 23162 15462 14715 14416 12187 11929 18153 14380 13095 14272 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 246310000 24087 2658 22615 45230;45231 36418;36419 36419 2 9606 Homo sapiens -0.10912897829371104 SDFFLEGPFMPPR Unmodified 1538.7228 0.72278587 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;Q2TU89;H0YCH5 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 8 0 1 63.95 63.973 3 0.0060644 19514 20230619_1888_Aki_TMTPro18x_K_F8 72.496 60.52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24088 3752 22616 45232 36420 36420 1 9606 Homo sapiens -0.025026614199077812 SDFLVQFK Unmodified 982.51238 0.51238239 2515 B4DKK3 yes yes 0 0 0 1 0 1 60.884 60.884 2 0.037646 18822 20230619_1880_Aki_TMTPro18x_K_F1 81.784 14.027 172290 112810 136020 159340 135490 189800 176370 179230 197740 226000 218450 261230 262830 233410 211250 276130 244580 302730 158840 103750 141400 157420 142290 189210 176130 185060 201240 226920 225360 262540 264470 243920 217940 278080 234090 287040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 439960000 24089 2515 22617 45233 36421 36421 1 9606 Homo sapiens 0.02042669040235978 SDGAEGQGQGQLLIK Unmodified 1499.758 0.7579854 4053 Q5SRE5;Q5SRE5-2;Q9BS12 NUP188 Nucleoporin NUP188 homolog yes no 0 0 0 4 0 1 48.551 48.589 3 1.6021E-10 13306 20230619_1883_Aki_TMTPro18x_K_F4 150.12 122.71 114730 88852 89880 117590 114290 116160 108230 116610 162150 126800 141310 129880 150020 124370 128030 162000 160150 151520 105860 81596 93885 116320 116710 117600 111120 119370 161200 127790 146230 131650 151810 130470 132530 161500 152860 144050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58554000 24090 4053 22618 45234 36422 36422 1 9606 Homo sapiens 0.02809672641637917 SDGALLLGASSLSGR Unmodified 1402.7416 0.74160705 93 A0A024R0H7;Q9BQA1;Q9BQA1-2;B4DJP0 WDR77 Methylosome protein 50 yes no 0 0 0 4.5 3.5 1 1 55.774 55.805 2 1.6229E-18 16083 20230619_1888_Aki_TMTPro18x_K_F8 219.43 155.87 206220 156570 188870 218060 164010 216480 217470 201840 243200 245340 242560 246580 277480 220340 236970 274200 270230 282490 190470 143870 193160 215050 174090 218560 216960 208470 246330 245670 250440 249390 280080 231100 243720 275030 258320 268180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 231660000 24091 93 22619 45235;45236 36423;36424 36424 2 9606 Homo sapiens 0.05634591475518391 SDGAPASDSKPGSSEAAPSSK Unmodified 1931.8708 0.87084291 3759 P80723;P80723-2 BASP1 Brain acid soluble protein 1 yes no 0 0 1 3.5 0.5 1 1 37.036 37.084 4 9.2317E-12 8334 20230619_1883_Aki_TMTPro18x_K_F4 141.45 109.65 247010 130070 335600 262160 363000 453690 190140 257820 221470 239770 430120 538770 356510 417470 434050 146290 460900 462910 228570 120340 333410 256120 370550 439340 203440 276360 232090 252430 429140 528380 370520 420010 439840 170140 440740 436310 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 420080000 24092 3759 22620 45237;45238 36425;36426;36427;36428 36427 4 9606 Homo sapiens -0.057817682136601434 SDGEAKPEPSPSPR Unmodified 1452.6845 0.68448611 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;A0A7I2V490;Q59FP7;A0A7I2V5F1;A0A7I2V5F6;A0A7I2V2G5;K7ENQ6;K7EJL0;K7ERQ1 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 1 3.5 0.5 1 1 33.441 33.5 3 0.0013805 6942 20230619_1882_Aki_TMTPro18x_K_F3 80.632 65.093 55993 34562 56736 56060 65694 79649 58196 65451 88810 69058 87203 88898 98303 82257 57072 52068 98368 85818 51702 31849 57706 55121 67444 78370 60082 67912 88611 70268 89966 89047 98034 83523 60995 54736 93632 81199 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96478000 24093 442 22621 45239;45240 36429 36429 1 9606 Homo sapiens -0.02374875800865084 SDGFDEESQR Unmodified 1168.4633 0.46325994 243 E9PQL5;E9PSC8;E9PKA8;A0A024R3H5;Q6ZUT1-3;Q6ZUT1;Q6ZUT1-2 C11orf57 Uncharacterized protein C11orf57 yes no 0 0 0 1 0 1 35.057 35.057 2 5.8521E-07 8002 20230619_1880_Aki_TMTPro18x_K_F1 146.88 116.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24094 243 22622 45241 36430 36430 1 9606 Homo sapiens -0.11423315777324206 SDGFSIETCK Unmodified 1142.4914 0.49138895 4021 Q59EF6;B4E1R7;P17655;B4DN77;P17655-2;B3KUH9;Q6ZVC6 CAPN2 Calpain-2 catalytic subunit yes no 0 0 0 4 0 1 49.009 49.046 2 6.0483E-11 13531 20230619_1883_Aki_TMTPro18x_K_F4 195.79 175.46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24095 4021 22623 45242 36431 36431 1 9606 Homo sapiens -0.07415709121596592 SDGGYTYDTSDLAAIK Unmodified 1675.7577 0.75771063 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 4.5 0.5 1 1 56.271 56.305 2 4.3819E-20 16761 20230619_1883_Aki_TMTPro18x_K_F4 220.23 194.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24096 3650 22624 45243;45244 36432;36433 36432 2 9606 Homo sapiens -0.05313791868888984 SDGIYIINLK Unmodified 1134.6285 0.62847478 205 C9J9K3;A0A8V8TMX1;A0A024R2L6;A0A0C4DG17;A0A8V8TLA4;P08865;A0A8I5KQE6;Q96RS2;A0A024R7P5;F8WD59 RPSA;LOC388524 40S ribosomal protein SA yes no 0 0 0 1 0 1 61.116 61.116 3 4.6365E-07 18896 20230619_1880_Aki_TMTPro18x_K_F1 144.65 101.91 154550 106000 133430 143690 129290 136600 153170 146730 162580 179910 167140 170320 207860 175200 149530 230700 198880 216680 142600 97419 137290 141910 135250 138900 153350 150120 165440 179740 173030 173600 208110 183500 156260 229900 189940 205880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1729699999.9999998 24097 205 22625 45245 36434 36434 1 9606 Homo sapiens 0.06654567820260127 SDGKPCPPFK Unmodified 1131.5383 0.53827956 3545 P35249;C9JZI1;P35249-2;C9J8M3 RFC4 Replication factor C subunit 4 yes no 0 0 1 1 0 1 43.596 43.596 3 0.032686 11682 20230619_1880_Aki_TMTPro18x_K_F1 59.542 45.578 157610 109590 132700 140320 132840 144710 148920 147080 167750 163180 168130 156680 181210 142150 140620 199810 194670 146810 145410 100650 136910 139250 138470 146050 149820 150530 169870 163860 172940 158990 182570 150130 146990 196740 185400 140180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104080000 24098 3545 22626 45246 36435 36435 1 9606 Homo sapiens -0.022228047797852923 SDGSGESAQPPEDSSPPASSESSSTR Unmodified 2535.0481 0.048091582 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 1 0 1 34.094 34.094 3 1.7774E-20 7570 20230619_1880_Aki_TMTPro18x_K_F1 157.9 153.46 6254.7 4041.3 4030.5 5205 4709.4 6374.7 5345.2 4973.3 5431.7 6026.9 5971.9 7568 5428.6 6639 6640.8 5404.2 10034 7043.6 5758.9 3713.2 4298.2 5172.8 4869.6 6321.7 5354.2 5207.8 5553.2 6081.7 6092.4 7570.8 5633.9 6805.7 6910 5548 9547 6683.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27364000 24099 594 22627 45247 36436 36436 1 9606 Homo sapiens -0.15803053982790516 SDGSLEDGDDVHR Unmodified 1400.5804 0.58041496 4589 Q9NRX5 SERINC1 Serine incorporator 1 yes yes 0 0 0 1 0 1 32.265 32.265 3 1.5101999999999998E-21 6869 20230619_1880_Aki_TMTPro18x_K_F1 231.52 215.98 14606 9898.2 16220 18877 18196 20894 16450 18991 19424 15464 23882 19478 19766 19410 19337 15982 22966 21311 13504 9138.2 16387 18332 18703 20913 16795 19437 19769 15949 24081 19609 20300 19837 19851 16428 21927 20191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80931000 24100 4589 22628 45248 36437 36437 1 9606 Homo sapiens -0.10385202628390289 SDGTETSTNLHQK Unmodified 1416.6481 0.6481006 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 3.5 0.5 1 1 32.563 32.634 3 5.9246E-06 6639 20230619_1882_Aki_TMTPro18x_K_F3 122.39 90.961 10459 5449.5 13331 14491 16205 23530 15446 18788 12949 9655.3 21964 25248 15524 15624 18289 6901 21871 22718 9670.9 5068.5 13361 13985 16612 22959 15560 19271 13655 10716 21857 24575 16193 15973 18681 7998.8 20897 21407 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12759000 24101 3598 22629 45249;45250 36438;36439 36438 2 9606 Homo sapiens -0.04355752697574644 SDIAVPIPK Unmodified 938.54368 0.54368251 1489 A0A384P5L2;Q08257;A6NP24;Q08257-3;C9JH92 CRYZ Quinone oxidoreductase yes no 0 0 0 7 0 1 52.768 52.838 2 0.054922 14866 20230619_1887_Aki_TMTPro18x_K_F7 73.931 30.685 65610 48458 56375 71750 68220 79112 80243 75941 94556 69527 76562 81921 77584 61982 72241 77920 79350 84371 60560 44567 58326 70592 70310 79325 80603 77654 94710 71025 79483 81924 78883 65456 73978 78390 75887 80049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59403000 24102 1489 22630 45251 36440 36440 1 9606 Homo sapiens 0.0719524207432869 SDIDEIVLVGGSTR Unmodified 1459.7518 0.75183739 3429 V9HWB4;P11021;A0A7P0TB36 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 3.5 0.5 1 1 57.252 57.271 2 9.3288E-22 17171 20230619_1883_Aki_TMTPro18x_K_F4 270.74 222.17 220370 178050 185240 218710 188320 235710 239410 230280 279810 263730 257970 286150 300440 257260 289230 346820 294080 349050 203490 163360 191410 217730 197080 236870 239610 236560 281910 265480 267810 288550 304780 271050 294910 347010 281710 331310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 385950000 24103 3429 22631 45252;45253 36441;36442 36442 2 9606 Homo sapiens 0.040351544100758474 SDIGDWFR Acetyl (Protein N-term) 1036.4614 0.46140945 571 A0A024R9G3;Q9BUN8-2;Q9BUN8;B4E1G1 DERL1 Derlin-1 yes no 1 0 0 2 0.816 1 1 1 64.393 64.406 2 8.4973E-05 20556 20230619_1881_Aki_TMTPro18x_K_F2 162.51 142.88 4109.2 3552.7 2936.8 5044.5 4817.3 6725.9 4973.3 3758.3 7501.8 6582 5397.9 6336.9 5339.9 6988.9 6191.4 6661.6 5689.6 6770.5 3792.1 3263.8 3124.4 4985.1 4878.2 6601 5075 4124 7416.3 6502.7 5642.9 6459.6 5509.7 7159.8 6256.4 6705.8 5456.1 6425.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115160000 24104 571 22632 45254;45255;45256 36443 36443 1 9606 Homo sapiens -0.055362800045941185 SDIGEVILVGGMTR Oxidation (M) 1461.7497 0.7497289 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 1 0 4.5 0.5 1 1 56.21 56.245 2 0.023284 16337 20230619_1885_Aki_TMTPro18x_K_F5 66.84 48.781 77464 62965 70174 80295 78296 70720 81762 79573 88116 80366 93895 94394 97357 81022 85414 106570 85335 105200 71570 57789 72055 79542 80666 72488 82443 80739 89612 81602 96216 94795 98663 85363 87189 106540 81786 99858 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172780000 24105 1488 22633 45257;45258 36444 36444 999 1 9606 Homo sapiens 0.037324024006011314 SDIGEVILVGGMTR Unmodified 1445.7548 0.75481428 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 6.5 0.5 1 1 61.294 61.341 2 4.7767E-16 18679 20230619_1886_Aki_TMTPro18x_K_F6 244.94 208.61 1167000 909070 1052800 1092200 887730 1198800 1167800 1140300 1324800 1386700 1309500 1355300 1545800 1278600 1414700 1664000 1432300 1657700 1077900 833990 1077000 1089500 944790 1202300 1166200 1175600 1340800 1387400 1355100 1375000 1563600 1342100 1443300 1664800 1371800 1573800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 913220000 24106 1488 22633 45259;45260 36445;36446;36447 36445 3 9606 Homo sapiens 0.049767062632327 SDIPEPER Unmodified 941.44543 0.44542503 4259 Q8NI27;A0A0C4DG98;H7C477;H0Y7U4;Q8NI27-2 THOC2 THO complex subunit 2 yes no 0 0 0 1 0 1 36.578 36.578 2 0.01049 8627 20230619_1880_Aki_TMTPro18x_K_F1 98.629 68.444 20889 16507 20378 24060 22559 28367 25183 22749 31482 28153 33091 32428 33366 32198 23804 33353 39088 34737 19307 15174 20805 23715 23367 28213 25427 23784 31763 28314 33867 32726 33632 33263 25267 33550 37221 32994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19036000 24107 4259 22634 45261 36448 36448 1 9606 Homo sapiens -0.027639862415185235 SDISPLTPR Unmodified 984.52401 0.52400971 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 5.5 0.5 1 1 42.814 42.902 2 0.00015078 10755 20230619_1886_Aki_TMTPro18x_K_F6 147.36 112.26 289420 217000 239070 304790 243310 264170 268780 267990 305570 296160 372170 454900 382820 337640 403990 380920 571590 491600 267100 199430 247490 299910 253200 270270 270760 274500 311760 302550 379850 450390 391670 354430 419490 388350 544720 466040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 562390000 24108 630 22635 45262;45263 36449 36449 1 9606 Homo sapiens 0.03112866063565889 SDIVQLR Unmodified 829.46577 0.46576654 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;Q6ZS03;Q96CF6;Q6ZN49;H7BZC3 HDLBP Vigilin yes no 0 0 0 5.5 0.5 1 1 43.116 43.203 2 0.0035745 10885 20230619_1886_Aki_TMTPro18x_K_F6 154.09 83.827 326960 245260 258970 294260 307180 326760 305400 308680 390650 365350 365760 361690 417870 304880 340940 425250 375830 340000 301650 225040 269640 293570 315430 327610 310650 318090 392240 366160 378610 365550 420840 322830 350420 420410 359010 323970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253140000 24109 292 22636 45264;45265 36450;36451 36451 2 9606 Homo sapiens 0.04421229208958266 SDKPDLSEVEK Acetyl (Protein N-term) 1287.6194 0.61942623 888 P0DX04;H3BU88;A0A087X1C1;P0CG35;P0CG34 TMSB15B;TMSB15A Thymosin beta-15B;Thymosin beta-15A yes no 1 0 1 2.5 0.5 1 1 49.036 49.108 2 2.8585E-06 13744 20230619_1882_Aki_TMTPro18x_K_F3 63.076 24.054 207200 164860 178050 209180 262370 308200 184010 167300 217270 207520 283690 257010 238240 213790 216380 260760 288380 261900 191330 151310 184720 208700 264050 300860 191160 181820 222050 209250 285710 257380 243670 224350 224630 261230 275040 248840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 452650000 24110 888 22637 45266;45267 36452;36453 36453 2 9606 Homo sapiens -0.012878703267233504 SDKPDMAEIEK Acetyl (Protein N-term) 1303.5966 0.5965823 1918 A2VCK8;P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide yes no 1 0 1 2.17 1.07 2 2 1 1 49.356 49.39 2;3 6.4268E-05 14168 20230619_1881_Aki_TMTPro18x_K_F2 64.711 16.554 + 387430 376720 346060 442390 506200 647360 726500 741060 1026300 514370 495620 547150 549870 463580 431390 690050 701170 701950 358350 345260 358420 444100 520230 640790 727930 744090 1005600 533870 536020 551580 554480 492970 457070 689560 668270 666590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2516900000 24111 1918 22638 45268;45269;45270;45271;45272;45273 36454;36455;36456 36455 3 9606 Homo sapiens -0.043072127158211515 SDKPDMAEIEK Acetyl (Protein N-term);Oxidation (M) 1319.5915 0.59149692 1918 A2VCK8;P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide yes no 1 1 1 2 1 1 1 43.288 43.322 3 1 NaN NaN + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 325650000 24112 1918 22638 45274;45275 0 9606 Homo sapiens -0.0555151657845272 SDKPNASDPSVPLK Unmodified 1453.7413 0.7412727 4413 Q9BQP7;Q5QPE7 MGME1 Mitochondrial genome maintenance exonuclease 1 yes no 0 0 1 6.5 0.5 1 1 43.802 43.889 3 4.7935E-05 10848 20230619_1887_Aki_TMTPro18x_K_F7 83.823 51.761 66249 51479 63091 61968 75865 75888 74381 67200 88996 80510 94959 85638 98807 80260 81196 100920 106120 95500 61216 47229 64530 61911 77713 75512 75522 69621 90047 80849 97231 86599 99879 84068 84355 100720 101220 90803 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111880000 24113 4413 22639 45276;45277 36457 36457 1 9606 Homo sapiens 0.032551717556543736 SDKSPDLAPTPAPQSTPR Unmodified 1863.9327 0.9326553 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;Q9BY44-2 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 1 6 0 1 40.4 40.492 3 2.6496E-06 9728 20230619_1886_Aki_TMTPro18x_K_F6 100.92 84.796 26894 42372 59557 39397 81759 42096 76099 45078 15522 31573 41121 10509 9355.2 7088.6 102580 6677.1 9303.7 5777.5 25261 38709 57954 40150 82373 42599 75160 45564 20313 31928 39605 11592 14865 7428.5 96993 6975.9 9779 5510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11012000 24114 4468 22640 45278 36458;36459 36458 2 9606 Homo sapiens 0.035246279961484106 SDKTEEIAEEEETVFPK Unmodified 1979.9211 0.92114714 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q3SWU7 DDX21 Nucleolar RNA helicase 2 yes no 0 0 1 3 0 1 56.593 56.63 4 3.5683E-13 17015 20230619_1882_Aki_TMTPro18x_K_F3 156.49 132.45 53897 41534 49533 54238 42600 52930 52073 51279 49840 66153 63217 50317 66651 52387 58344 69135 58102 57479 49786 38137 50610 53707 45094 53569 51917 52900 51509 65553 64294 51923 67477 54877 59522 68524 55590 54720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 301250000 24115 1748 22641 45279 36460 36460 1 9606 Homo sapiens -0.029616586085467134 SDLAVPSELALLK Unmodified 1354.7708 0.77078192 1081 A0A0S2Z3Y1;Q08380;B4DVE1;B4DI70;B3KP88;B4DDG4;B4DWA8 LGALS3BP Galectin-3-binding protein yes no 0 0 0 7 0 1 62.817 62.853 3 0.0016201 19136 20230619_1887_Aki_TMTPro18x_K_F7 77.185 47.375 243920 224250 241440 192820 200230 248100 278330 238700 321640 230640 282900 282080 225120 218430 345950 209500 285020 330820 225700 205030 244630 198380 213580 246590 277360 244370 323160 235250 289790 281790 237480 227000 345550 217880 273610 312760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 778750000 24116 1081 22642 45280 36461 36461 1 9606 Homo sapiens 0.10758735771787542 SDLELQFK Unmodified 978.50221 0.50221163 52 A0A024QZN6;Q9ULJ6-3;Q9ULJ6 RAI17;ZMIZ1 Zinc finger MIZ domain-containing protein 1 yes no 0 0 0 5 0 2 54.893 54.961 2;3 0.0026103 15833 20230619_1885_Aki_TMTPro18x_K_F5 123.98 76.166 85389 72325 85642 86014 87218 95063 106900 94357 107470 97496 112090 111340 115250 101990 107020 118280 113420 130750 78976 66324 87018 85884 90955 95439 106630 96569 109580 98809 114940 112130 117160 106380 109390 119270 108580 123990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19417000 24117 52 22643 45281;45282 36462;36463 36462 2 9606 Homo sapiens 0.012100613150096251 SDLGPCEK Unmodified 904.39603 0.396032 3127 Q86Y74;J3KPP4;O95232;Q6PKC2;A8K3C5;D6RDI2 CROP;LUC7L3 Luc7-like protein 3 yes no 0 0 0 3.5 0.5 1 1 39.731 39.78 2 0.0022496 9490 20230619_1882_Aki_TMTPro18x_K_F3 129.72 94.622 91018 52858 131550 120050 159290 199020 128690 169780 142820 105180 176090 202240 159050 152210 166030 76068 209330 185930 84320 48980 130630 116630 162520 194340 132160 173600 145820 112730 178560 199010 163330 154650 170560 84136 199700 175520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75144000 24118 3127 22644 45283;45284 36464 36464 1 9606 Homo sapiens -0.05999017521958194 SDLHSVLAQK Unmodified 1096.5877 0.58767259 286 Q676U5;Q676U5-2;A0A024R494;A5YM60;Q676U5-3;E7EVC7;L7UQD0;Q9H7M5;Q17RG0;B7ZLM5;C9JAY7;A0A024R4B6;C9JK97;C9J1B2;Q676U5-5;Q676U5-4;Q9NWG8 ATG16L1;FLJ00045 Autophagy-related protein 16-1 yes no 0 0 0 8 0 1 44.702 44.723 3 0.0099199 11375 20230619_1888_Aki_TMTPro18x_K_F8 76.143 50.024 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24119 286 22645 45285 36465 36465 1 9606 Homo sapiens 0.04324226500671102 SDLIDQMNASGPIK Unmodified 1487.729 0.72899346 799 A0A087WSW7;Q6I7N8;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;F6RPV8;Q9NW36 HELLS Lymphoid-specific helicase yes no 0 0 0 7 0 1 56.703 56.761 3 0.00088457 16500 20230619_1887_Aki_TMTPro18x_K_F7 82.908 68.217 33983 32527 34530 39611 36476 47229 38070 35681 59267 40887 43515 36299 45027 37018 38303 40067 47540 44506 31461 29823 35100 39505 37872 46901 38929 37398 58489 40969 45390 37105 45594 38345 39584 40460 45375 42236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5423000 24120 799 22646 45286 36466 36466 1 9606 Homo sapiens 0.004638120209619956 SDLIEVATR Unmodified 1002.5346 0.53457439 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 0 3.5 0.5 1 1 48.657 48.716 2 0.0016704 13406 20230619_1883_Aki_TMTPro18x_K_F4 113.62 85.448 271630 186080 236320 256960 214460 248730 248320 228470 234290 330060 408170 376340 413430 361230 282670 312600 401950 424340 250650 171050 242790 253500 225500 251640 248160 237670 246640 329400 410430 379380 415600 370680 296470 321120 383590 401770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 299140000 24121 4666 22647 45287;45288 36467 36467 1 9606 Homo sapiens 0.03340848718005418 SDLLLEGFNNYR Unmodified 1439.7045 0.70449327 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 0 7 0 1 61.42 61.459 3 0.0038718 18421 20230619_1887_Aki_TMTPro18x_K_F7 80.871 66.191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24122 3549 22648 45289 36468 36468 1 9606 Homo sapiens 0.0022291992977443442 SDLLLSGR Unmodified 859.47633 0.47633123 3222 O14744;O14744-2;B2RDD7;O14744-5;O14744-3;O14744-4;G3V580;G3V5L5;G3V2L6;C9JSX3 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed;Protein arginine N-methyltransferase 5 yes no 0 0 0 6 0 1 46.539 46.622 2 0.012388 12394 20230619_1886_Aki_TMTPro18x_K_F6 95.815 13.363 174230 143080 156950 162600 186820 218350 193350 191180 240560 167710 183380 167020 185390 153190 195650 198270 191370 175540 160980 131170 161380 163360 192070 215920 195970 196520 239890 170910 190860 169290 189630 160850 198540 197250 183030 167020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175220000 24123 3222 22649 45290 36469 36469 1 9606 Homo sapiens 0.04097211863393113 SDLYSSCDR Unmodified 1101.4397 0.43968773 3963 Q96E39;Q2VIN3 RBMXL1 RNA binding motif protein, X-linked-like-1 yes no 0 0 0 2 0 1 36.377 36.435 2 7.9324E-12 8266 20230619_1881_Aki_TMTPro18x_K_F2 224.7 203.26 52481 38055 47571 45373 51245 58421 56920 57519 62879 46402 53075 58130 52520 48040 46244 46054 75202 59930 48456 34919 48781 45409 53118 58056 57244 58517 63270 47870 54925 58118 53385 49781 48720 47095 71567 56831 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30692000 24124 3963 22650 45291 36470 36470 1 9606 Homo sapiens -0.10697452815497854 SDLYSSGR Unmodified 883.40356 0.40356022 3564 P38159;P38159-2;B4E352;B3KRG5;H3BUY5 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 0 0 0 4.5 1.12 1 1 1 1 34.962 35.025 2 0.00025145 7519 20230619_1883_Aki_TMTPro18x_K_F4 168.23 112.11 701230 364270 835450 918850 1138100 1213500 945040 1110900 963570 780530 1202700 1180300 1118000 1003900 983400 425700 1361900 1161900 647960 338440 842500 884960 1152100 1201200 965390 1132700 989140 818800 1218700 1173200 1137700 1011500 1019900 480310 1298000 1096500 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1067899999.9999999 24125 3564 22651 45292;45293;45294;45295 36471;36472;36473 36472 3 9606 Homo sapiens -0.04280541930029358 SDLYVSDAFHK Unmodified 1280.6037 0.60371659 2788 CON__P41361 yes yes 0 0 0 5.5 0.5 1 1 49.823 49.899 3 1.0114E-06 13838 20230619_1886_Aki_TMTPro18x_K_F6 161.94 131.39 + 100850 90768 102120 113750 160880 191080 140080 136700 197040 343740 634000 985980 254440 498530 606390 347150 511330 784670 93321 83262 104620 113930 162100 186110 144470 149230 214550 355190 616120 953280 290070 521040 603880 376660 492050 739640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 649100000 24126 2788 22652 45296;45297 36474;36475 36475 2 -0.025361120530988046 SDMMSHLVK 2 Oxidation (M) 1078.4787 0.47871577 2188 B1AHB0;P33992;A8K521;B4DQ39;B4DVK5;B1AHA9 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 2 0 5 0 1 34.093 34.178 3 0.035164 7247 20230619_1885_Aki_TMTPro18x_K_F5 47.96 34.759 37770 25200 32460 44714 46530 48091 40346 43632 44261 40492 45051 39273 38675 34839 41496 36710 45361 39919 34844 23241 33695 43542 47042 48248 41166 44797 44896 41060 45875 39790 39824 36183 42330 37060 43326 37901 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30297000 24127 2188 22653 45298 36476 36476 1366;1367 1 9606 Homo sapiens -0.05738443785458003 SDMMSHLVK Oxidation (M) 1062.4838 0.48380115 2188 B1AHB0;P33992;A8K521;B4DQ39;B4DVK5;B1AHA9 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 1 0 6 0 1 40.495 40.587 3 0.037255 9764 20230619_1886_Aki_TMTPro18x_K_F6 55.064 34.111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24128 2188 22653 45299 36477 36477 1366;1367 1 9606 Homo sapiens -0.04494139922871909 SDMMSHLVK Unmodified 1046.4889 0.48888653 2188 B1AHB0;P33992;A8K521;B4DQ39;B4DVK5;B1AHA9 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 7.5 0.5 1 1 47.109 47.177 3 0.00038438 12294 20230619_1888_Aki_TMTPro18x_K_F8 107.24 79.502 139260 113050 130300 131550 117040 143040 142030 134650 141800 125790 111230 109770 125020 98246 120920 134530 122150 110090 128690 103660 132940 131520 123390 143560 141760 137920 143260 127140 116190 111810 126930 103660 123170 133210 116780 104870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145360000 24129 2188 22653 45300;45301 36478 36478 1 9606 Homo sapiens -0.03249836060240341 SDNGELEDKPPAPPVR Acetyl (Protein N-term) 1761.8533 0.85334235 3839 Q13177;A8K5M4 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase yes no 1 0 1 1 0 1 44.977 44.977 2 8.9653E-05 12275 20230619_1880_Aki_TMTPro18x_K_F1 81.865 71.633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24130 3839 22654 45302 36479 36479 1 9606 Homo sapiens 0.0028898104199015506 SDNKDDDIDIDAI Unmodified 1447.6314 0.63144748 406 A0A024R6Q1;P55010;Q6IBU0;B4DEN3 EIF5 Eukaryotic translation initiation factor 5 yes no 0 0 1 1 0 1 55.464 55.464 3 6.2595E-05 16566 20230619_1880_Aki_TMTPro18x_K_F1 89.46 84.659 110210 90526 98580 106230 109000 123900 116380 122220 145830 122400 113670 131620 143380 107200 140670 144020 135610 128170 101820 83013 101320 106240 112690 123910 117810 124950 145610 124010 119600 132350 145170 113370 142820 143250 129750 121930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1523699999.9999998 24131 406 22655 45303 36480 36480 1 9606 Homo sapiens -0.07446298374179605 SDNVLLGMEGSVK Oxidation (M) 1363.6653 0.66533057 3839 Q13177;A8K5M4;H7C1X3 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase yes no 0 1 0 4 0 1 50.147 50.182 3 0.014315 14054 20230619_1883_Aki_TMTPro18x_K_F4 59.709 36.988 94885 76335 93325 94344 97800 109320 104680 102530 124840 111710 131250 129510 126100 113820 127760 135950 140170 149310 87716 70041 95009 94004 101450 109260 105780 105460 126230 112980 134140 130190 129000 119080 130620 136980 134060 141640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183680000 24132 3839 22656 45304 36481 36481 2514 1 9606 Homo sapiens -0.00195548416127167 SDNVLLGMEGSVK Unmodified 1347.6704 0.67041595 3839 Q13177;A8K5M4;H7C1X3 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase yes no 0 0 0 6 0 1 57.462 57.533 3 7.6279E-05 17055 20230619_1886_Aki_TMTPro18x_K_F6 106.42 67.79 69479 60965 60852 77804 64946 73839 69728 68856 80002 84995 79707 76402 91376 74745 81858 92132 87173 85724 64208 55939 62698 77107 67313 74853 70352 71141 80971 84779 82285 77914 92418 78092 83754 91920 83345 81494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76966000 24133 3839 22656 45305 36482 36482 1 9606 Homo sapiens 0.01048755446481664 SDPDACPTMPLLAMLLR Unmodified 1899.9257 0.92566113 3106 Q9HC39;Q9HBB9;I3L2C7;Q8WUM5;P57678;I3L4A4;I3L399 GEMIN4 Gem-associated protein 4 yes no 0 0 0 2 0 1 66.809 66.815 3 0.004606 21531 20230619_1881_Aki_TMTPro18x_K_F2 68.173 55.813 3010.9 2057.3 2588.5 3374.8 2240.6 2703.3 2335.4 2188.9 3559.5 3417.5 3132.3 3661.1 4150.4 1617.8 2254.4 3285.8 2687.5 2894.9 2778 1895.2 2663.7 3287.6 2362.9 2771.2 2387.5 2307.5 3541.8 3394.8 3278.8 3632.7 4100.3 1832.3 2355.4 3249.7 2568.6 2753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4664600 24134 3106 22657 45306 36483 36483 1 9606 Homo sapiens 0.01169532528047057 SDPEGENIHAGLLK Unmodified 1478.7365 0.73652168 2490 B4DHL7;H3BND4;Q6P996-3;Q6P996-4;Q6P996-5;Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes no 0 0 0 3.5 0.5 1 1 45.06 45.118 3 5.2095E-05 11785 20230619_1883_Aki_TMTPro18x_K_F4 98.865 85.149 118390 89989 117250 113950 120590 122090 121590 122080 136030 130860 147740 138990 143920 119200 135700 125210 169750 153850 109420 82608 119210 113250 124940 122870 123040 124960 138210 132030 150800 140060 146620 124000 139940 127370 161980 145880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 110720000 24135 2490 22658 45307;45308 36484;36485 36484 2 9606 Homo sapiens 0.016302876128975186 SDPFLEFFR Unmodified 1156.5553 0.55530983 2180 Q99829;B0QZ18;F2Z2V0;A6PVH9;E7ENH5;Q59EI4;Q5JX58;Q5JX59;Q5JX45;Q5JX60;Q5JX44;Q5JX56;Q5JX52;Q5JX61 CPNE1 Copine-1 yes no 0 0 0 6.5 0.5 1 1 63.932 63.97 2 1.0675E-05 19636 20230619_1887_Aki_TMTPro18x_K_F7 172.21 118.75 755510 667480 761030 628720 705140 791700 725340 752850 787200 721760 787360 886970 801190 733970 891370 832810 883230 912630 698990 610780 770910 641120 737510 787720 732580 770820 798370 736140 809470 887540 821910 767130 904050 840030 845350 865870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1029299999.9999999 24136 2180 22659 45309;45310 36486 36486 1 9606 Homo sapiens -0.01670560902334728 SDPGLLTNTMDVFVK Unmodified 1635.8178 0.81780846 3758 P78527;P78527-2;A0A8V8TMR1;H0YG84 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7 0 1 63.241 63.274 3 4.8919E-08 19341 20230619_1887_Aki_TMTPro18x_K_F7 138.19 112.6 203400 137300 185210 198980 151710 219950 191490 203790 207140 237450 243480 267510 274420 241270 234300 294760 269350 281140 187730 126290 189300 196080 161760 220250 191390 210200 211730 239030 249610 269320 277250 252480 241230 294420 257460 267130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 521700000 24137 3758 22660 45311 36487 36487 1 9606 Homo sapiens 0.02533227260573767 SDPIMLLK Unmodified 915.50994 0.50993955 699 P08559-4;P08559-2;P08559;Q5JPU2;P08559-3;A0A024RBX9;Q53GE3;A5YPB6;A5PHJ9;Q9UNV7;Q6LCA3;Q99724;Q99725;P78557 PDHA1;PDHA1/LOC79064 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha yes no 0 0 0 8 0 1 59.835 59.872 2 0.01319 17737 20230619_1888_Aki_TMTPro18x_K_F8 101.99 48.818 84244 77913 87046 95847 75329 97232 108070 110150 114080 95019 94821 94040 109740 87380 100540 111840 112770 114430 77983 71450 88106 95358 80133 98468 107250 111230 115050 96823 98859 95346 111070 91688 103130 112110 107790 108650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28393000 24138 699 22661 45312 36488 36488 1 9606 Homo sapiens 0.04880497310909959 SDPIMLLK Oxidation (M) 931.50485 0.50485417 699 P08559-4;P08559-2;P08559;Q5JPU2;P08559-3;A0A024RBX9;Q53GE3;A5YPB6;A5PHJ9;Q9UNV7;Q6LCA3;Q99724;Q99725;P78557 PDHA1;PDHA1/LOC79064 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha yes no 0 1 0 8 0 1 56.18 56.237 2 0.069671 16245 20230619_1888_Aki_TMTPro18x_K_F8 89.55 49.447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24139 699 22661 45313 36489 36489 424 1 9606 Homo sapiens 0.03636193448301128 SDPIQEIR Unmodified 956.49271 0.49270958 1425 A0A8I5KU76;A0A384MEE7;Q9BS26;A0A8I5KW59;A0A8I5KVZ0;A0A8I5KTR3 ERP44 Endoplasmic reticulum resident protein 44 yes no 0 0 0 2 0 1 42.019 42.098 2 0.012388 10785 20230619_1881_Aki_TMTPro18x_K_F2 95.815 63.46 165690 141160 179640 181480 216400 235170 217810 226010 281200 217300 238440 251540 228590 198040 220370 275280 260270 226460 153360 129540 181900 180670 221920 233500 221460 231230 280970 221230 246300 252080 233320 209990 226730 272510 248410 215730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 332300000 24140 1425 22662 45314 36490 36490 1 9606 Homo sapiens 0.012722930294671642 SDPLAYTVCK Unmodified 1152.5485 0.5485099 4524 Q9H7B4;Q3B7A0;B0QZ88 SMYD3 Histone-lysine N-methyltransferase SMYD3 yes no 0 0 0 6.5 0.5 1 1 52.249 52.325 2 0.0013979 14591 20230619_1887_Aki_TMTPro18x_K_F7 122.13 82.133 58446 48979 59254 60919 60471 60877 59881 57669 62002 76035 78215 74503 79701 67356 79507 91553 82086 83635 54058 44937 60141 60546 62643 61515 60510 59642 63764 75789 79541 75500 81278 70988 81063 91134 78525 79515 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30094000 24141 4524 22663 45315;45316 36491 36491 1 9606 Homo sapiens -0.021662418452251586 SDPLCVLLQDVGGGSWAELGR Unmodified 2228.0896 0.089566649 2180 Q99829;B0QZ18;F2Z2V0;A6PVH9;E7ENH5;Q59EI4;Q5JX58;Q5JX59;Q5JX45;Q5JX60;Q5JX44;Q5JX56;Q5JX52;Q5JX61;Q5JX55;Q5JX54;E7EV27;Q5JX57;Q5JX53 CPNE1 Copine-1 yes no 0 0 0 7 0 1 67.108 67.131 3 2.9131E-12 20951 20230619_1887_Aki_TMTPro18x_K_F7 142.43 140.22 23625 17126 16966 19278 17166 16519 21790 21541 23641 22256 24011 24747 22764 19993 17972 36179 31263 25495 21779 15706 17804 19267 17936 17041 21758 21683 23986 22523 24562 24882 23068 21611 19193 35440 29744 24350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12479000 24142 2180 22664 45317 36492;36493 36492 2 9606 Homo sapiens 0.02464544824169934 SDPLFSAQR Unmodified 1019.5036 0.50360861 2095 A8K6T5;Q9UBL3-3;Q9UBL3;F5H8F7;B4DPT1;Q9UBL3-2 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes no 0 0 0 6 0.816 1 1 1 44.457 44.54 2 0.00056199 11439 20230619_1885_Aki_TMTPro18x_K_F5 131.41 27.395 136840 113970 125060 131310 138140 154620 140050 146290 194310 104420 100380 94361 102560 88527 121170 109360 110710 103900 126460 104490 128250 131520 142650 154390 142720 148880 190870 107650 107510 96130 105540 92613 122240 109310 105980 98767 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 379050000 24143 2095 22665 45318;45319;45320 36494 36494 1 9606 Homo sapiens -0.005363045962440083 SDPLLIGIPTSENPFK Unmodified 1726.9142 0.91415169 4653 Q9UBI6;Q53GD1 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12;Guanine nucleotide-binding protein subunit gamma yes no 0 0 0 7 0 1 63.596 63.628 3 1.1192E-08 19465 20230619_1887_Aki_TMTPro18x_K_F7 140.74 126.18 89230 71928 83952 85708 70237 90414 98932 86074 102340 112280 102560 111690 123340 105240 108160 129390 117490 136530 82460 65973 85553 85504 74906 90953 98176 88973 104150 112050 106200 113180 124510 110070 110890 129970 112460 129540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209510000 24144 4653 22666 45321 36495 36495 1 9606 Homo sapiens 0.0797711809223074 SDPLMDTLSSMNR Unmodified 1465.6541 0.65411395 4239 Q8N806;B2RDC9;E9PCJ7;Q05DA8;H0YJY4 UBR7 Putative E3 ubiquitin-protein ligase UBR7 yes no 0 0 0 6 0 1 59.371 59.433 2 5.9844E-11 17890 20230619_1886_Aki_TMTPro18x_K_F6 189.66 149.31 44820 35712 42903 45119 32307 43706 41832 41287 50031 48532 58821 52577 66963 47075 44885 61023 56531 63183 41422 32776 43603 44775 34731 44229 41905 42556 50836 48791 60218 53054 66966 49528 46764 61166 54022 59964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12486000 24145 4239 22667 45322 36496 36496 1 9606 Homo sapiens -0.060086937819050945 SDPNRETDDTLVLSFVGQTR Unmodified 2249.0924 0.09240342 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5;B7Z859 DDB1 DNA damage-binding protein 1 yes no 0 0 1 4 0.816 1 1 1 57.486 57.518 3 7.8064E-30 17261 20230619_1883_Aki_TMTPro18x_K_F4 209.27 190.98 343020 267010 296050 309580 332280 430180 351570 361810 399350 408950 376130 360580 461260 363450 365670 450740 397710 403800 316720 244880 305360 310730 343460 424130 354860 375420 403510 409400 390570 368490 463330 379560 375760 448690 380260 384010 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1039599999.9999999 24146 1710 22668 45323;45324;45325 36497;36498 36498 2 9606 Homo sapiens 0.017820914826643275 SDPSIVR Unmodified 772.40792 0.40791731 3561;2294 P61601;B2RB70;Q5U068;Q6FGY1;P37235;P84074;O75544 NCALD;HPCAL1;HPCA Neurocalcin-delta;Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin no no 0 0 0 3 0.816 1 1 1 34.251 34.31 2 9.8724E-05 7258 20230619_1883_Aki_TMTPro18x_K_F4 139.27 73.129 110830 71979 126080 126880 170810 190800 160760 176060 203660 132440 203700 226500 179160 176180 188620 93886 249980 250910 102470 66388 127510 124370 173650 187610 164000 179650 204690 139150 208090 223740 184290 179120 194470 104770 238590 236650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124180000 24147 2294;3561 22669 45326;45327;45328 36499;36500 36500 2 9606 Homo sapiens 0.012609672835196761 SDPTSYAGYIEDLKK Unmodified 1685.8148 0.81483158 3652 P54709;C9JA36;D3DNF9;P54709-2;C9JXZ1 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes no 0 0 1 7 0 1 59.02 59.069 3 8.7899E-08 17404 20230619_1887_Aki_TMTPro18x_K_F7 134.06 118.67 112010 100030 114450 108530 101620 115680 135420 134850 132790 161330 166380 147610 170120 130180 176530 161060 133950 136490 103650 91634 115860 109090 107450 116900 134550 137110 136870 161110 169210 149940 173620 136530 176960 160050 128590 129890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84872000 24148 3652 22670 45329 36501 36501 1 9606 Homo sapiens -0.00064324592540288 SDPVVSYR Unmodified 921.4556 0.45559579 3447 P13639;Q8TA90;B4DPU3;Q6W6M8 EEF2 Elongation factor 2 yes no 0 0 0 4.5 1.12 1 1 1 1 38.305 38.373 2 0.00026614 8824 20230619_1883_Aki_TMTPro18x_K_F4 167.9 134.54 624280 483100 554090 561470 593920 719620 607850 606010 823410 717540 796150 735250 827650 683290 669930 874130 912170 775210 576520 443070 569390 562720 615210 713000 618760 629840 825240 720180 818830 744380 836340 716580 698450 869250 869470 737850 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2558100000 24149 3447 22671 45330;45331;45332;45333 36502;36503;36504 36503 3 9606 Homo sapiens -0.008273785162828062 SDPYALVR Unmodified 919.47633 0.47633123 644 B3KY56;B3KMV5;A0A024RB17;A0A024RB16;Q9BSJ8;Q9BSJ8-2 FAM62A;ESYT1 Extended synaptotagmin-1 yes no 0 0 0 6 0 1 45.015 45.104 2 0.0050535 11741 20230619_1886_Aki_TMTPro18x_K_F6 103.75 48.975 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24150 644 22672 45334 36505 36505 1 9606 Homo sapiens 0.013372118633697028 SDPYLEFHK Unmodified 1134.5346 0.53457439 561 O75131;A0A024R994;Q05DL8;A0A087WYQ3 CPNE3 Copine-3 yes no 0 0 0 5.5 0.5 1 1 47.759 47.838 3 0.00011973 12834 20230619_1885_Aki_TMTPro18x_K_F5 136.33 102.46 174610 143120 165620 200740 175960 194650 193510 190500 207600 195550 228060 249620 218120 199680 220000 254550 243890 267020 161390 131490 169360 197820 182430 197150 194560 195130 211440 198990 232780 249290 223130 210430 225200 255510 233280 253400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 291590000 24151 561 22673 45335;45336 36506 36506 1 9606 Homo sapiens -0.0273115128200061 SDQDYILK Unmodified 980.48148 0.48147619 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2;F8VR77;F8W0A3;H0YIN7;F8VZ69 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 4 0.816 1 1 1 48.799 48.863 2 0.00079109 13420 20230619_1883_Aki_TMTPro18x_K_F4 156.01 8.969 807210 661880 741680 741310 819380 833600 885970 810590 882870 950950 990480 992770 1171100 902320 898950 1193100 1170400 996090 745920 606690 760000 743650 846120 835840 889340 833600 904500 954710 1018900 1003300 1176100 949200 935420 1182400 1116000 948820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1150000000 24152 654 22674 45337;45338;45339 36507;36508;36509 36508 3 9606 Homo sapiens -0.009545290646542526 SDQEAKPSTEDLGDKK Acetyl (Protein N-term) 1788.8378 0.83775186 276 A0A5P8PBC0;A0A024R3Z2;B8ZZN6;P63165;B8ZZJ0;B9A032 SUMO1 Small ubiquitin-related modifier 1 yes no 1 0 2 4 0.707 1 2 1 43.283 43.343 3;4 0.0033747 10965 20230619_1883_Aki_TMTPro18x_K_F4 42.647 37.317 82142 73532 81423 78725 92075 92754 98610 85335 95395 101710 110860 80309 107740 75750 106900 83606 92985 75903 75993 67353 82913 79305 94868 92618 98937 88143 98011 101260 112690 82415 109870 78792 107820 83551 88983 72237 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 421880000 24153 276 22675 45340;45341;45342;45343 36510 36510 1 9606 Homo sapiens -0.025113502657177378 SDQLQQAVQSQGFINYCQK Unmodified 2241.0484 0.048430116 762 O94979-9;D6REX3;O94979-6;O94979-3;O94979-4;O94979-10;O94979-2;O94979;O94979-8;A0A1S5UZ19;A1LU61;A0A024RDH6;D6RHZ5;O94979-7;H7BXG7;O94979-5;H0YAB3;H0Y8V7 SEC31A;SEC31L1 Protein transport protein Sec31A yes no 0 0 0 1.5 0.5 1 1 57.466 57.473 3 7.5354E-15 17468 20230619_1880_Aki_TMTPro18x_K_F1 161.19 148.89 44287 34417 40930 43447 39865 47728 50021 46778 47442 53212 54904 51003 58095 48096 46258 64529 55155 59925 40912 31591 41867 43192 41784 47905 49770 48032 48801 53355 56086 51819 58622 50581 47842 64267 52718 56948 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220550000 24154 762 22676 45344;45345 36511;36512 36511 2 9606 Homo sapiens -0.022452162153058453 SDQNLQTALELTR Unmodified 1487.758 0.7579854 3354 O95373;B3KQG6 IPO7 Importin-7 yes no 0 0 0 4 1.41 1 1 1 1 1 53.747 53.796 2 2.5425E-10 15681 20230619_1883_Aki_TMTPro18x_K_F4 203.39 153.25 270350 214020 246780 261110 214830 275470 260200 262500 307530 320230 273910 299550 390280 304010 251120 390960 375140 379460 249760 196360 252300 260030 227310 277090 261250 270610 309580 319960 287740 305210 387970 318210 265410 390390 357760 360520 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 946070000 24155 3354 22677 45346;45347;45348;45349;45350 36513;36514;36515 36513 3 9606 Homo sapiens 0.033616726415857556 SDQQLDCALDLMR Acetyl (Protein N-term);Oxidation (M) 1621.7076 0.70760609 1434 B2R7T8;A0A384MR50;P47756;B1AK87;P47756-1;B1AK85;A0A6I8PIN8 CAPZB F-actin-capping protein subunit beta yes no 1 1 0 1 0 1 57.71 57.71 2 9.3389E-06 17571 20230619_1880_Aki_TMTPro18x_K_F1 60.547 55.935 93173 78295 86350 70388 81505 96596 88423 85845 117670 38223 35529 27381 36090 23069 64937 36841 36716 30528 86117 71631 88118 72180 85350 95470 89614 87159 114690 41014 40351 28222 38151 24705 63809 36536 35360 29085 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 336240000 24156 1434 22678 45351 36516 36516 919 1 9606 Homo sapiens -0.07837941070079069 SDQQLDCALDLMR Acetyl (Protein N-term) 1605.7127 0.71269147 1434 B2R7T8;A0A384MR50;P47756;B1AK87;P47756-1;B1AK85;A0A6I8PIN8 CAPZB F-actin-capping protein subunit beta yes no 1 0 0 1.5 0.5 1 1 63.988 63.993 2 5.5226999999999996E-36 20389 20230619_1881_Aki_TMTPro18x_K_F2 185.29 155.49 12055 8214.2 10248 12046 12344 9870.4 12010 11472 17997 12943 10238 13082 14506 14685 12160 13374 13685 11978 11121 7556.3 10598 11818 12633 10191 12305 11654 17683 13022 11074 13315 14579 15012 12496 13384 13068 11398 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 183590000 24157 1434 22678 45352;45353 36517;36518 36518 2 9606 Homo sapiens -0.065936372074475 SDQWKPLNLEEK Unmodified 1485.7464 0.74635808 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;A0A6Q8PFB2;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;C9J2Z7;C9K073 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 1 6 0.816 1 1 1 52.715 52.788 3 2.8646E-05 14810 20230619_1887_Aki_TMTPro18x_K_F7 122.97 88.056 534420 470070 569460 539450 468910 541820 598210 567090 527170 656660 591750 429420 545550 373270 642700 372240 352310 245240 494670 430860 573930 539430 498250 548380 593730 579950 544260 651540 601320 444270 561750 387280 634270 368040 339150 234660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 439140000 24158 1676;2901 22679 45354;45355;45356 36519;36520 36520 2 9606 Homo sapiens 0.02291475618289951 SDQYGRVFTSWTGGGAAASR Unmodified 2072.9664 0.96641505 2782 CON__P15636 yes yes 0 0 1 4 0 1 50.863 50.894 3 1.2052E-06 14390 20230619_1883_Aki_TMTPro18x_K_F4 100.41 91.126 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24159 2782 22680 45357 36521 36521 1 -0.027149505121087714 SDRPVYEGPSMFGGER Unmodified 1782.7995 0.79953264 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1;F8VU51;H0YI23;B4DMQ9 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 1 4.5 0.5 1 1 45.712 45.773 3 1.7021E-25 11944 20230619_1885_Aki_TMTPro18x_K_F5 190.46 177.83 84868 62049 83636 90648 78741 103790 96764 102140 110300 92391 106540 104440 111990 92554 101260 111070 119060 121550 78414 57059 85061 89335 82804 103830 96961 104190 111370 94288 109710 105130 113610 96868 104190 111870 113760 115330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 74118000 24160 3610 22681 45358;45359 36522;36523 36523 2 9606 Homo sapiens -0.06055514661397865 SDSAPPTPVNR Unmodified 1139.5571 0.55710075 4197 Q86X10-4;Q86X10-3;Q86X10;B4E2E8;A2A2F0;Q86X10-2 RALGAPB Ral GTPase-activating protein subunit beta yes no 0 0 0 4 0 1 33.521 33.575 2 0.00044854 6951 20230619_1883_Aki_TMTPro18x_K_F4 117.53 103.52 16936 9821.2 15728 17598 15922 16828 15980 17186 14758 12858 20459 22075 20748 15438 17735 13648 24847 22669 15623 9065.6 16088 17111 16516 17072 16086 17425 15315 13501 20745 21761 21011 16066 18454 14262 23689 21443 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8020900 24161 4197 22682 45360 36524 36524 1 9606 Homo sapiens -0.0070955188439256744 SDSEDICLFTK Unmodified 1313.5809 0.58093224 3325 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 0 3.5 0.957 1 2 2 1 56.482 56.509 2;3 8.6044E-07 16983 20230619_1882_Aki_TMTPro18x_K_F3 134.57 119.88 489770 432430 501700 527790 491570 507670 564870 526770 514940 606610 487990 446820 661220 476170 599890 742500 628260 607270 453190 396590 508640 525010 512780 515500 563810 539050 527240 603760 509450 462390 665910 504680 613430 733810 600700 578300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 702980000 24162 3325 22683 45361;45362;45363;45364;45365;45366 36525;36526;36527;36528 36527 4 9606 Homo sapiens -0.06331499232919668 SDSFENPVLQQHFR Unmodified 1702.8063 0.80633258 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 0 0 0 6 0.816 1 1 1 48.436 48.517 3 1.5221999999999998E-46 13210 20230619_1886_Aki_TMTPro18x_K_F6 294.31 267.28 340440 277050 304070 337190 308200 347070 343480 366620 409080 402430 376720 401160 429600 353020 390300 463340 405610 451870 314510 254150 312180 335760 320970 350660 346380 374080 411920 404720 390540 405690 434840 371630 398840 462980 388260 429140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4178599999.9999995 24163 150 22684 45367;45368;45369 36529;36530 36530 2 9606 Homo sapiens -0.016958337185087657 SDSFPER Unmodified 836.36645 0.36644643 1299 A0A1U9X839;A0A1U9X830;P18615;P18615-3;H9ZYJ1;A0A0A0MSN9;B7Z6T4;P18615-4;E9PD43;A0A0A0MT02 NELFE;NELF-E;RDBP Negative elongation factor E yes no 0 0 0 2 0 1 35.406 35.463 2 0.092771 7856 20230619_1881_Aki_TMTPro18x_K_F2 65.676 36.527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24164 1299 22685 45370 36531 36531 1 9606 Homo sapiens -0.058282134757973836 SDSGGSSSEPFDR Unmodified 1326.5324 0.53240214 1307 P48634;A0A1U9X982;A0A1U9X9A9;A0A1U9X999;A0A1U9X998;A0A1U9X993;A0A1U9X988;A0A1U9X996;A0A1U9X985;A0A1U9X977;A0A1U9X975;A0A1U9X974;A0A1U9X9A5;A0A1U9X987;A0A1U9X972;P48634-3;P48634-2;P48634-4 PRRC2A Protein PRRC2A yes no 0 0 0 1 0 1 35.557 35.557 2 8.5572E-21 8209 20230619_1880_Aki_TMTPro18x_K_F1 224.66 136.16 49428 41525 42824 43574 57620 61160 56929 53045 72314 56017 63699 55405 67868 57198 49309 65208 75936 65814 45662 38037 44280 44084 58681 60346 57885 54822 72406 56492 65858 56389 68280 59374 52019 65388 72327 62541 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45614000 24165 1307 22686 45371 36532 36532 1 9606 Homo sapiens -0.11780276548415713 SDSHDIPR Unmodified 925.42536 0.42535829 4148 Q7KZN9-2;Q7KZN9;B4DQM2 COX15 Cytochrome c oxidase assembly protein COX15 homolog yes no 0 0 0 2 0 1 25.623 25.701 3 0.046976 4336 20230619_1881_Aki_TMTPro18x_K_F2 49.418 37.192 933.68 1451.4 1124.5 0 1672.5 0 1141.9 1719.8 1997.2 0 1612.4 2893.3 1350.1 604.45 1164.9 655.96 2718.4 2202.9 869.66 1315.9 1125.5 0 1666.1 0 1209.7 1590.4 1961.2 0 1668.7 2724.9 1375.9 703.68 1270.2 746.1 2582.3 2077.8 1 1 1 0 1 0 1 1 1 0 1 1 1 1 1 1 1 1 196460 24166 4148 22687 45372 36533 36533 1 9606 Homo sapiens -0.0403373718148714 SDSYVELSQYR Unmodified 1345.615 0.61500956 3633 P52298;P52298-3;Q7Z3W9;F8WE41 NCBP2;DKFZp686G18222 Nuclear cap-binding protein subunit 2 yes no 0 0 0 3.5 0.5 1 1 48.026 48.086 2 2.0448E-08 13078 20230619_1883_Aki_TMTPro18x_K_F4 202.2 170.27 168360 137490 181310 180820 180740 206170 178270 211910 183140 212450 235480 227210 255990 221080 226870 276540 240200 250770 155770 126230 183080 179400 187710 206640 180260 215990 188540 215040 239980 229970 259220 231120 232230 275430 229770 238420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 544780000 24167 3633 22688 45373;45374 36534 36534 1 9606 Homo sapiens -0.04397334749614856 SDTAAAAVR Unmodified 860.43519 0.4351947 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 3 0.707 1 2 1 30.831 30.906 2 7.6451E-05 5901 20230619_1882_Aki_TMTPro18x_K_F3 159.46 111.42 99453 53883 123840 126920 185240 184170 130110 168290 152310 86537 149150 166170 112270 123800 152080 55085 163240 135990 91954 49982 124670 122770 185880 181400 135200 170730 153510 94325 151750 163510 117840 125390 154000 61339 155890 128410 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 88476000 24168 134 22689 45375;45376;45377;45378 36535;36536;36537 36536 3 9606 Homo sapiens -0.0006054917610072152 SDTDVSMPLVEER Oxidation (M) 1492.6715 0.67153816 4062 Q5T6V5 C9orf64 UPF0553 protein C9orf64 yes yes 0 1 0 1 0 1 42.526 42.526 2 0.072987 11212 20230619_1880_Aki_TMTPro18x_K_F1 53.124 34.517 18589 19313 18040 23752 23790 27739 25757 25593 30421 30372 29895 30622 32890 23897 26193 33906 35472 33640 17214 17705 18499 23665 24325 27694 25991 26420 30718 30445 30826 30849 33137 25421 27306 33870 33837 31961 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35940000 24169 4062 22690 45379 36538 36538 2663 1 9606 Homo sapiens -0.055090749752480406 SDTDVSMPLVEER Unmodified 1476.6766 0.67662354 4062 Q5T6V5 C9orf64 UPF0553 protein C9orf64 yes yes 0 0 0 1.5 0.5 1 1 50.318 50.344 2 1.1948E-27 14480 20230619_1880_Aki_TMTPro18x_K_F1 255.52 212.44 87434 73552 82717 81382 88079 106020 89770 85596 108130 111390 114840 121020 124640 100590 105860 125040 131790 142750 80826 67406 84500 81885 91217 104870 90995 89546 109430 111500 117960 121710 125990 105790 109510 126190 125920 135360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162980000 24170 4062 22690 45380;45381 36539;36540 36539 2 9606 Homo sapiens -0.04264771112616472 SDTLPLATR Unmodified 972.52401 0.52400971 3924 Q15269;C9J544 PWP2 Periodic tryptophan protein 2 homolog yes no 0 0 0 6 0.816 1 1 1 43.393 43.477 2 0.00069085 10935 20230619_1885_Aki_TMTPro18x_K_F5 126.82 108.84 71249 56438 59378 68557 75227 89982 77156 81085 84478 80561 91046 91573 93725 82992 81804 96012 92236 97944 65778 51778 61613 68508 77024 89137 77916 83412 85903 81792 93219 92203 95029 86560 84050 96345 88190 92987 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225030000 24171 3924 22691 45382;45383;45384 36541 36541 1 9606 Homo sapiens 0.0366486606358194 SDTLTADVIGR Acetyl (Protein N-term) 1188.5986 0.59863121 1356 Q15813-2;Q15813;A0A2R8Y5Q8;A0A2R8YHI9;A0A2R8Y7E7;A0A2U3TZJ6;A0A2R8YER9;A0A2R8YFL4;A0A2R8Y809;A0A2R8Y4V6;A0A2R8Y784;A0A2R8YFM3;A0A2R8Y4P2;A0A2R8Y787;A0A2R8Y5H6;A0A2R8Y6L2;A0A2R8YF12;A0A2R8Y897;A0A2R8Y597;A0A2R8YH53 TBCE Tubulin-specific chaperone E yes no 1 0 0 1 0 1 55.507 55.507 2 1.2471E-08 16630 20230619_1880_Aki_TMTPro18x_K_F1 107.15 90.951 22542 18572 15776 20548 21053 21348 27002 18954 26852 20333 20250 22649 18353 15958 18370 21064 22882 21993 20793 17021 16702 20598 21604 21484 26838 19595 27078 20558 21026 22650 18804 16950 18944 21129 21844 20883 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138450000 24172 1356 22692 45385 36542 36542 1 9606 Homo sapiens 0.01187584084300397 SDTPLIYK Unmodified 935.4964 0.49639797 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;A0A804HK69;A0A804HKU1;A0A804HIG2 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 2 2 49.793 49.873 2;3 0.00031551 13841 20230619_1886_Aki_TMTPro18x_K_F6 166.78 109.68 386230 319090 350510 385900 382000 406110 441150 411900 524170 412990 468390 471510 459470 420960 452730 520580 505660 528180 356880 292690 359740 384530 395920 409330 443790 420570 526630 419340 482870 474520 469200 441000 463800 521760 483460 501500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 545920000 24173 1736 22693 45386;45387;45388;45389 36543;36544 36543 2 9606 Homo sapiens 0.026069628033383196 SDTQLVVR Unmodified 916.49779 0.49779495 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 4 0.816 1 1 1 38.443 38.505 2 0.0027237 8903 20230619_1883_Aki_TMTPro18x_K_F4 122.18 75.753 96904 78400 87138 85184 111290 115040 104900 105470 134170 120350 139060 133220 130240 108710 117310 126890 160280 129010 89524 71847 89672 85900 113520 113890 107040 108770 135170 121260 141990 133840 132620 113910 121920 127320 152720 122630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180970000 24174 2863 22694 45390;45391;45392 36545 36545 1 9606 Homo sapiens 0.03620596892108097 SDVASVNWSAPSQAFPR Unmodified 1817.8697 0.86966111 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;A0A804HI02;A0A804HJU6;A0A0J9YVR1;A0A0J9YWI5;A0A0J9YXU4;I3L120 TBCD Tubulin-specific chaperone D yes no 0 0 0 4.5 3.5 1 1 55.762 55.793 3 2.8847E-06 16771 20230619_1880_Aki_TMTPro18x_K_F1 105 97.024 168280 131990 166760 158240 167030 178150 187510 188870 197100 149200 149750 133790 157400 135740 164900 152050 160320 163770 155550 121090 169480 157990 173950 178890 188180 191110 198240 152520 156160 136700 160790 140860 167220 153240 153460 155420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 144240000 24175 1722 22695 45393;45394 36546;36547;36548 36547 3 9606 Homo sapiens -0.0065589300124884176 SDVCTPGGTTIYGLHALEQGGLR Unmodified 2401.1696 0.16960788 920 B4DI71;D3DWK4;A0A0A0MQS1;Q53H96;B5MD87;B4DGI7;Q53H96-2 PYCRL Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 3 yes no 0 0 0 7 0 1 56.023 56.081 3 3.1459E-44 16213 20230619_1887_Aki_TMTPro18x_K_F7 234.22 217.5 52843 41915 46478 54628 54228 67771 54077 52084 79479 66975 70801 78323 77671 63316 74976 72496 75674 87154 48805 38482 47918 54264 55838 67149 55301 54703 79159 67281 73402 78450 78907 66324 76315 73532 72477 82582 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11904000 24176 920 22696 45395 36549;36550 36550 2 9606 Homo sapiens 0.025069864273973508 SDVDLYQVR Unmodified 1093.5404 0.54038805 3123 J3KN29;O00233;F5H5V4;F5GX23;O00233-2;F5H7X1;F5H169 PSMD9 26S proteasome non-ATPase regulatory subunit 9 yes no 0 0 0 3 0 1 45.548 45.624 2 9.457E-05 12124 20230619_1882_Aki_TMTPro18x_K_F3 156.51 126.7 244490 193760 248810 253340 268240 308060 276070 274120 312200 316160 334940 337830 344390 269230 304590 347800 348120 304790 226060 177890 252730 251640 277400 306520 279080 283490 317000 317910 342990 339670 349150 284150 313050 345740 332360 290110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236000000 24177 3123 22697 45396 36551 36551 1 9606 Homo sapiens -0.0026405277033063612 SDVEAIFSK Unmodified 994.49713 0.49712625 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;P07910-4;D3DPI2;G3V5X6;G3V3K6;G3V251;G3V575;G3V555;B4DSU6;Q6PKD2;P0DMR1;A0A0G2JNQ3;A0A0G2JPF8;B7ZW38;B2RXH8;O60812;B4DMJ1;G3V4M8;G3V2H6;Q569J8 HNRNPC;hCG_1641229;HNRPCL1;HNRNPCL4;HNRNPCL3;HNRNPCL2;HNRNPCL1;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 0 0 0 5.2 1.17 2 1 1 1 56.673 56.722 2;3 7.5316E-06 16945 20230619_1883_Aki_TMTPro18x_K_F4 133.13 93.031 166880 126570 165960 163530 168500 192430 197450 178940 208770 194180 198170 188400 231040 173320 211630 193800 191570 189350 154230 116220 168710 162500 175620 192050 197720 184170 211620 195300 205230 191030 233630 180490 214330 194260 183480 179900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3479499999.9999995 24178 2226 22698 45397;45398;45399;45400;45401 36552;36553;36554 36552 3 9606 Homo sapiens -0.0003424254761057455 SDVETIFSK Unmodified 1024.5077 0.50769094 2053 Q5QPL9;A8K4T9;Q53GL6;Q9UKM9-2;Q9UKM9;Q5QPM1;B4DSJ1;Q5QPM2 RALY RNA-binding protein Raly yes no 0 0 0 5 0 1 55.111 55.178 2 0.00021106 15923 20230619_1885_Aki_TMTPro18x_K_F5 156.92 96.481 73467 64025 70116 78260 70736 85367 83704 76835 88765 85503 92291 87130 97908 78990 89043 94455 91531 96583 67935 58722 71579 77949 73829 85575 83795 79345 90276 86014 94741 88136 99290 82594 90869 94778 87587 91694 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32469000 24179 2053 22699 45402 36555 36555 1 9606 Homo sapiens -0.003582598931643588 SDVFPGPSFR Unmodified 1107.5349 0.53490874 458 A8K5G0;A0A024R7K0;M0R2Z9;Q8IX01-4;Q8IX01-3;Q8IX01;M0R3F6;M0R065;M0R216 SFRS14;SUGP2 SURP and G-patch domain-containing protein 2 yes no 0 0 0 8 0 1 51.628 51.705 2 0.00025367 14254 20230619_1888_Aki_TMTPro18x_K_F8 142.56 102.46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24180 458 22700 45403 36556 36556 1 9606 Homo sapiens -0.014557315621232192 SDVLQPGAEVTTDDR Unmodified 1601.7533 0.75329395 49 G5EA31;A0A024QZM6;P53992;B4DSN3;B7ZAY6;P53992-2 SEC24C Protein transport protein Sec24C yes no 0 0 0 1 0 1 45.117 45.117 2 2.3128E-13 12334 20230619_1880_Aki_TMTPro18x_K_F1 203.29 192.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24181 49 22701 45404 36557 36557 1 9606 Homo sapiens -0.02351256291831305 SDVPVYLK Unmodified 919.50148 0.50148335 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B4DL23;B4DS35 CEP170 Centrosomal protein of 170 kDa yes no 0 0 0 7 0 1 51.166 51.243 2 0.0068953 14165 20230619_1887_Aki_TMTPro18x_K_F7 117.02 83.898 113920 76495 89622 116960 136260 106070 119030 100760 104680 131570 131740 161690 160890 138790 136460 170600 169060 177080 105030 70408 93870 114560 137030 108050 120540 104240 108740 132180 135390 161930 162160 145580 141180 171180 161500 168090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67729000 24182 1960 22702 45405 36558 36558 1 9606 Homo sapiens 0.03851266665958519 SDVQIHVPTFTFR Unmodified 1545.794 0.79397698 3310 O75569-3;O75569-2;O75569;A0A7I2YQ87;A0A7I2V5H3;A0A7I2V2P4;F8WEG8;G5E9Q4;A0A7I2V5C2;A0A7I2V3L6;C9JMM3;A0A7I2V315 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes no 0 0 0 2 0 1 56.061 56.079 3 6.4925E-07 17066 20230619_1881_Aki_TMTPro18x_K_F2 143.46 91.115 37585 28774 33538 33730 26563 40633 34958 34114 50313 42635 45305 40679 44220 42403 42544 52113 36580 45252 34709 26393 34316 33751 28497 40390 35235 35527 50152 42610 46636 41480 45111 44166 43022 51805 35117 43021 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146170000 24183 3310 22703 45406 36559 36559 1 9606 Homo sapiens 0.042911746091021996 SDVYCEVCEFLVK Unmodified 1646.732 0.73202992 58 Q53FJ5;A0A024QZQ2;Q59EN5;P07602;P07602-2;P07602-3;B4DEK5;B4DRB7;A0A0J9YXB8 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes no 0 0 0 6 0 1 63.675 63.721 3 0.092542 19816 20230619_1886_Aki_TMTPro18x_K_F6 35.737 24.466 15203 14363 16608 15313 12963 26032 20329 17534 24951 17201 15771 21313 18336 22029 20118 8880.7 13343 23852 14082 13153 16711 15528 14045 25286 20199 18494 24765 17559 16772 21424 18753 21999 19992 10015 12905 22458 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76713000 24184 58 22705 45407 36560 36560 1 9606 Homo sapiens -0.06546680916540026 SDYAQLLEDMQNAFR Oxidation (M) 1815.8098 0.80976297 3566 P38606-2;P38606;B7Z2V6;A0A994J477 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 1 0 4 0 1 60.398 60.4 3 0.0053942 18515 20230619_1883_Aki_TMTPro18x_K_F4 67.416 56.601 22060 19067 20349 19426 22862 28057 25620 21650 29694 22551 24947 25393 27367 22582 28903 27514 23451 29837 20392 17460 20852 19710 23652 27571 25783 22592 29808 22853 25937 25563 27917 23653 29057 27704 22534 28291 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15271000 24185 3566 22706 45408 36561 36561 2237 1 9606 Homo sapiens -0.0655095172678557 SDYAQLLEDMQNAFR Unmodified 1799.8148 0.81484835 3566 P38606-2;P38606;B7Z2V6;A0A994J477 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 0 7 0.816 1 1 1 65.303 65.334 3 2.2319000000000003E-25 20077 20230619_1888_Aki_TMTPro18x_K_F8 230.36 207.22 32262 23871 34165 39740 23646 33474 32169 36490 34578 52574 38152 42027 53095 46652 50714 49510 46273 56333 29828 21986 34430 38722 25674 34357 32050 37491 35345 51921 39672 43263 53602 48144 51361 50095 44386 53396 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 276240000 24186 3566 22706 45409;45410;45411 36562;36563 36563 2 9606 Homo sapiens -0.053066478641540016 SDYCLPVADYNYNPHPR Unmodified 2079.9109 0.910874 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;H0Y9Y3 SYNPO2 Synaptopodin-2 yes no 0 0 0 6 0 1 49.157 49.235 3 1.5876E-18 13582 20230619_1886_Aki_TMTPro18x_K_F6 181.58 153.41 34657 32159 42381 37248 34135 41016 41400 41998 39902 44651 43825 37372 50038 40812 39869 60215 45016 48876 32132 29474 42259 37273 36295 41211 41305 42898 40922 44755 45004 38455 50379 43010 41120 59499 43048 46529 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82793000 24187 4686 22707 45412 36564 36564 1 9606 Homo sapiens -0.08588500024097812 SDYDMVDYLNELR Unmodified 1631.7137 0.71373732 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 0 0 3.5 0.5 1 1 63.059 63.077 2 2.0475000000000002E-27 19711 20230619_1882_Aki_TMTPro18x_K_F3 290.07 275.65 53600 40245 46441 50763 38824 52512 48315 51786 62506 69999 71379 87486 100410 91295 56669 105570 103420 130570 49482 36944 47692 50423 41304 52928 48631 53443 63287 70309 74139 88148 99564 94812 61252 107090 98683 123650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 145680000 24188 3904 22708 45413;45414 36565;36566 36565 2 9606 Homo sapiens -0.07685099566856479 SDYSEAAK Unmodified 869.37668 0.37667677 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 3 0 1 36.958 37.011 2 0.045387 8336 20230619_1882_Aki_TMTPro18x_K_F3 71.692 46.694 7843.5 3941 10325 9581.5 17301 14369 10993 14214 7934.4 7301 12156 14827 10287 11974 13826 9473.3 12384 14406 7254.2 3659.6 10375 9267.1 17197 14161 11372 14336 8424.9 7970.7 12220 14610 10744 12299 13893 9852.1 11877 13623 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7594700 24189 3758 22709 45415 36567 36567 1 9606 Homo sapiens -0.06323650541241932 SEAAGSPDQGSTYSPAR Unmodified 1679.7387 0.73870652 84 Q96S66;A0A6Q8PG75;Q96S66-2;A0A6Q8PEZ7;A0A024R0G0;A0A6Q8PHQ1;A0A6Q8PG30;A0A024R095;A0A6Q8PGA4;Q96S66-4;Q96S66-3;A0A8I5KRC0;A0A6Q8PG14;A0A6Q8PFF7 CLCC1 Chloride channel CLIC-like protein 1 yes no 0 0 0 2.5 0.5 1 1 34.881 34.94 3 2.8874999999999997E-38 7552 20230619_1882_Aki_TMTPro18x_K_F3 197.17 186.51 22390 13747 16934 19026 23800 26717 23502 23218 30554 27751 30268 30842 28749 23778 25057 30812 35953 32710 20630 12644 17774 18872 24199 26345 23923 24075 30709 27904 30999 30930 29223 25137 26176 30938 34272 31060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61405000 24190 84 22710 45416;45417 36568 36568 1 9606 Homo sapiens -0.0739732843994716 SEADVAQQFQYAVR Unmodified 1610.7689 0.76888444 2625 B4DYP7;Q96CW5-2;Q96CW5;A0A3B3ITE3;A0A087WU06;Q96CW5-3 TUBGCP3 Gamma-tubulin complex component 3 yes no 0 0 0 5 0 1 52.943 53.014 2 2.2053E-06 15029 20230619_1885_Aki_TMTPro18x_K_F5 133.05 105.93 20684 17763 19835 22353 18273 25297 22946 19977 25827 28527 28197 26022 26954 24143 25442 28562 26096 29176 19126 16297 20219 22227 19273 25223 22951 21014 26253 28300 28749 26469 27483 25199 25953 28658 24983 27693 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14346000 24191 2625 22711 45418 36569 36569 1 9606 Homo sapiens -0.012069249841033525 SEAGLAGAPAR Unmodified 998.51451 0.51450765 2209 B2R4I8;Q92572 AP3S1 AP-3 complex subunit sigma-1 yes no 0 0 0 3.5 0.5 1 1 34.876 34.932 2 2.7594E-12 7507 20230619_1883_Aki_TMTPro18x_K_F4 211.85 163.29 96275 63035 98541 97905 113990 113270 98760 101170 131480 101050 127140 125990 108050 99446 109350 83968 136410 120240 88929 58037 100110 96170 116730 113080 101500 104200 131800 102950 129800 125810 111020 102640 112510 86757 130140 113880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73294000 24192 2209 22712 45419;45420 36570;36571 36571 2 9606 Homo sapiens 0.015190977780321191 SEAIQTSHFQGR Unmodified 1359.6531 0.6531264 4078 Q5VW36;B3KNV9 FOCAD Focadhesin yes no 0 0 0 6 0 1 34.193 34.239 3 4.7288E-24 7325 20230619_1886_Aki_TMTPro18x_K_F6 244.64 195.22 18941 17874 21542 24655 25968 31224 25373 26272 30780 29727 27464 24321 29819 22591 28202 28512 30459 25120 17551 16410 21756 24413 26627 30949 25785 27264 30934 29702 28418 24886 30266 23687 28829 28370 29084 23915 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37040000 24193 4078 22713 45421 36572 36572 1 9606 Homo sapiens -0.012314040443243357 SEANATQLLR Unmodified 1101.5778 0.57783619 4268 Q8TCG1;A0A894J8Q9;F8WF26;F8WAX6 KIAA1524 Protein CIP2A yes no 0 0 0 5 0 1 42.731 42.814 2 2.7522E-07 10689 20230619_1885_Aki_TMTPro18x_K_F5 166.07 102.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24194 4268 22714 45422 36573 36573 1 9606 Homo sapiens 0.031110384952853565 SEAPNWATQDSGFY Unmodified 1571.6529 0.65285163 1659 P60228;A0A7I2V3I0;Q6IAX5;B2R806;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;H0YBP5;E5RGA2;A0A7I2V5P9;E5RHS5;H0YAW4 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 0 3.5 0.5 1 1 61.537 61.553 2 4.0166E-06 18961 20230619_1883_Aki_TMTPro18x_K_F4 136.63 129.61 233460 197950 196800 229630 176930 207180 234800 238250 247560 273520 273710 256600 275440 239850 259630 312260 287200 303220 215640 181480 202900 229060 187060 211940 233830 242200 252620 273930 279580 260830 280360 251790 266110 311960 274640 288030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 499420000 24195 1659 22715 45423;45424 36574;36575;36576 36576 3 9606 Homo sapiens -0.1101086855480844 SEAQLQEIR Unmodified 1072.5513 0.55128709 511 A0A8Q3SHZ4;A0A494C1F2;A0A024R8B6;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A8Q3WLX1;Q7Z3C4;A0A494BZU9 NUP214;DKFZp686J0330 Nuclear pore complex protein Nup214 yes no 0 0 0 2 0 1 39.832 39.902 2 0.065268 9772 20230619_1881_Aki_TMTPro18x_K_F2 64.73 21.647 117900 97858 111700 129000 133340 150590 148270 133440 157900 140650 156450 155180 167050 132790 128550 169000 167620 165290 108980 89839 114440 127950 137220 150220 148880 137750 160210 142250 161000 156180 168300 139660 133770 168920 159980 157040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126750000 24196 511 22716 45425 36577 36577 1 9606 Homo sapiens 0.01791349603922754 SEAVVEYVFSGSR Unmodified 1428.6885 0.68850885 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299;H7C597 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 0 6.5 0.5 2 2 59.918 59.972 2;3 6.233599999999999E-28 18095 20230619_1886_Aki_TMTPro18x_K_F6 199.27 191.54 184550 163310 182340 186380 172070 194200 202490 180890 202240 220530 213280 218140 247500 189960 223880 265080 232750 246620 170720 149680 185300 186480 180340 195530 202410 186860 206640 220650 219870 220660 250250 200930 228800 264010 222700 234390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 336340000 24197 1229 22717 45426;45427;45428;45429 36578;36579 36578 2 9606 Homo sapiens -0.008687863071600077 SEAYQQQIEMER Unmodified 1510.6722 0.67220686 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A0U1RQJ2;A0A494C073 DST Dystonin yes no 0 0 0 2 0 1 42.483 42.562 2 0.018674 10999 20230619_1881_Aki_TMTPro18x_K_F2 77.305 64.252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24198 1693 22718 45430 36580 36580 1 9606 Homo sapiens -0.06270235535566826 SECLNNIGDSSPLIR Unmodified 1673.8043 0.80428367 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;A0A7P0T944;A0A7P0T9C0;B4DSC0;E7EW37 TNPO1 Transportin-1 yes no 0 0 0 5.5 0.5 1 1 51.749 51.823 2;3 4.4865E-26 14501 20230619_1885_Aki_TMTPro18x_K_F5 181.08 155.84 98696 79640 96504 95447 83443 97936 91076 91100 107700 119510 117010 108090 123130 105570 112400 136550 144940 128890 91237 73050 98006 95149 87985 98695 91959 94304 109230 118920 119820 110220 125010 110620 116400 136220 138250 122560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271420000 24199 629 22719 45431;45432 36581;36582 36581 2 9606 Homo sapiens -0.005666305186196041 SEDDESGAGELTR Unmodified 1364.5692 0.56918158 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;P33993-2 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 1 0 1 35.863 35.863 2 5.9729E-36 8300 20230619_1880_Aki_TMTPro18x_K_F1 282.61 256.02 70672 39301 66159 78673 65610 107510 73186 80927 136300 103490 129740 135470 156010 130200 82955 94551 151540 142160 65184 36347 67692 76478 68820 105740 75301 85095 134880 104490 134470 135800 154950 132670 89469 98244 144260 134550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 361240000 24200 1091 22720 45433 36583 36583 1 9606 Homo sapiens -0.09852024722522401 SEDDSAVPLAK Unmodified 1130.5455 0.54553301 638 B4DMD3;B4DY34;A0A024RAW9;Q9Y2W2 WBP11 WW domain-binding protein 11 yes no 0 0 0 3 0 1 45.677 45.753 2 0.0014883 12181 20230619_1882_Aki_TMTPro18x_K_F3 104.2 78.464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24201 638 22721 45434 36584 36584 1 9606 Homo sapiens -0.014517936983793334 SEDEAGCSSVDEESYK Unmodified 1790.6789 0.67886796 4153 Q7L4I2-2;Q7L4I2;B3KMH4 RSRC2;FLJ11021 Arginine/serine-rich coiled-coil protein 2 yes no 0 0 0 1 0 1 42.368 42.368 3 1.2224000000000002E-25 11121 20230619_1880_Aki_TMTPro18x_K_F1 176.4 173.43 53572 35300 44209 52409 56685 61128 52214 56371 63198 67404 63736 62147 74252 58132 56843 65630 85007 67047 49405 32483 45919 51603 57802 61027 53255 58190 63845 67369 65798 63184 74616 60529 59699 65890 80938 63733 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209700000 24202 4153 22722 45435 36585 36585 1 9606 Homo sapiens -0.1848443195613072 SEDETEYGCR Unmodified 1244.4615 0.46154538 624 A0A2R8YFI2;A0A2R8YEA4;A0A2R8Y5H3;A0A2R8Y7Q9;A0A2R8YEK8;A0A2R8YE18;A0A2R8Y5S9;A0A024RAJ5;A0A2R8Y7C5;Q9Y5P4-2;Q9Y5P4;Q9Y5P4-3;A0A2R8YCI0 COL4A3BP Collagen type IV alpha-3-binding protein yes no 0 0 0 1 0 1 32.632 32.632 2 8.6192E-10 7005 20230619_1880_Aki_TMTPro18x_K_F1 211.45 210.16 20948 12117 30923 19311 30048 34570 22347 23739 24753 26799 42587 54200 41731 45573 43403 19161 55867 54358 19411 11167 30493 19115 31062 33536 23100 25081 25786 27758 42904 53396 42766 45887 44651 21737 53322 51262 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34411000 24203 624 22723 45436 36586 36586 1 9606 Homo sapiens -0.15090692857597787 SEDFSLPAYMDR Oxidation (M) 1445.6133 0.613295 3445 P13073;H3BN72;H3BNV9;Q86WV2;H3BNI5 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes no 0 1 0 3 0.816 1 1 1 51.899 51.945 2 7.7243E-05 14975 20230619_1882_Aki_TMTPro18x_K_F3 120.54 102.23 71955 64328 72833 89028 93427 90937 99260 95772 107220 86015 103430 103090 101800 86863 96940 107360 97757 108290 66580 59073 74321 87870 95459 91931 99959 97276 108540 87995 106230 103380 103720 91206 98769 107590 93598 102810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254050000 24204 3445 22724 45437;45438;45439 36587;36588 36588 2084 2 9606 Homo sapiens -0.0916871182992054 SEDFSLPAYMDR Unmodified 1429.6184 0.61838038 3445 P13073;H3BN72;H3BNV9;Q86WV2;H3BNI5 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes no 0 0 0 3.5 0.5 1 1 57.031 57.064 2 2.3199999999999998E-58 17050 20230619_1883_Aki_TMTPro18x_K_F4 297.9 257.9 85722 74590 89772 109040 85570 115790 117360 108550 120300 109040 109150 124300 129570 112270 118430 124850 119970 134880 79327 68546 90961 107310 90194 116310 116540 111460 121930 110670 113530 125060 131080 116870 120750 125810 114880 127950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212150000 24205 3445 22724 45440;45441 36589;36590 36590 2 9606 Homo sapiens -0.07924407967288971 SEDFSLPAYMDRR Unmodified 1585.7195 0.7194914 3445 P13073;H3BN72;H3BNV9;Q86WV2;H3BNI5 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes no 0 0 1 5.5 0.5 1 1 50.822 50.899 3 0.017977 14165 20230619_1885_Aki_TMTPro18x_K_F5 62.14 27.762 50766 40106 38899 45763 45481 51045 46025 36744 54359 51920 60058 56863 47469 45688 54463 53611 61779 48720 46841 36774 40641 45808 46785 50904 46614 38974 55111 51833 60789 57122 49222 47877 55653 53487 58949 46375 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66585000 24206 3445 22725 45442;45443 36591 36591 1 9606 Homo sapiens -0.0499395626459318 SEDGEIVSTPR Unmodified 1188.5622 0.5622457 1809 A0A8V8NBT1;Q12769;G3V198;E9PR16 NUP160 Nuclear pore complex protein Nup160 yes no 0 0 0 1 0 1 38.131 38.131 2 1.972E-24 9255 20230619_1880_Aki_TMTPro18x_K_F1 212.4 153.97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24207 1809 22726 45444 36592 36592 1 9606 Homo sapiens -0.024492928124118407 SEDGVEGDLGETQSR Unmodified 1577.6805 0.68052294 3815 Q09666;B4DTV0 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 1 0 1 40.238 40.238 2 1.4813E-13 10196 20230619_1880_Aki_TMTPro18x_K_F1 180.24 164.35 19027 13100 16207 15086 20913 20111 22472 21935 28612 27684 36043 39626 27176 28844 36651 35747 37190 44157 17555 12019 16762 15149 21383 20007 22754 22432 29072 28028 36282 39315 28507 30451 37131 36282 35627 41826 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33039000 24208 3815 22727 45445 36593 36593 1 9606 Homo sapiens -0.08521010085246417 SEDLLDYGPFR Unmodified 1310.6143 0.61428128 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 4 0.816 1 1 1 61.209 61.236 2 7.7186E-12 18399 20230619_1885_Aki_TMTPro18x_K_F5 233.46 179.25 465550 389850 440690 477340 414690 498000 469190 494690 562000 481800 488180 493210 531990 425880 513220 531620 506110 539010 430360 357620 449600 475180 434760 501850 472910 505250 564180 488070 506360 498000 540490 447270 521920 532900 484540 511750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 921210000 24209 3384 22728 45446;45447;45448 36594;36595;36596 36596 3 9606 Homo sapiens -0.02860129398686695 SEDPDQQYLILNTAR Unmodified 1761.8533 0.85334235 4389 Q96QK1;Q5HYM2 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 3 0.816 1 1 1 53.288 53.322 2 2.0745E-33 15606 20230619_1882_Aki_TMTPro18x_K_F3 263.7 241.16 91578 76457 78880 83382 85288 95367 95745 93316 102200 105150 112650 128610 123990 101670 114420 132910 126170 139270 84593 70061 81315 83829 88398 95504 96137 95800 104190 106330 115710 128570 125710 107420 117270 133350 120700 132160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 217690000 24210 4389 22729 45449;45450;45451 36597;36598 36598 2 9606 Homo sapiens 0.0028898104199015506 SEDPPGQEAGSEEEGSSASGLAK Unmodified 2217.9509 0.95094372 1549 A0A494C0R8;K7EIG1;O75153;I3L2B0 CLUH Clustered mitochondria protein homolog yes no 0 0 0 1 0 1 42.93 42.93 3 4.8341E-20 11422 20230619_1880_Aki_TMTPro18x_K_F1 166.69 157.75 17202 11724 12051 13834 13123 15674 14505 11377 18144 23444 18734 18936 22380 17575 14523 24397 20675 18700 15850 10760 12698 13818 13612 15615 14649 12249 18339 22910 19343 19374 22347 18537 15300 24060 19708 17829 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44556000 24211 1549 22730 45452 36599 36599 1 9606 Homo sapiens -0.10931371401102297 SEDPPTTPIR Unmodified 1111.551 0.55095274 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B7Z3E7;A8KA50;C9JXV0;H7C151 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 2 0 1 37.084 37.144 2 0.00043604 8568 20230619_1881_Aki_TMTPro18x_K_F2 144.09 103.17 31904 25035 30627 37446 38346 45321 41191 42534 53082 35736 36528 46985 53452 32758 40827 50392 50639 56203 29483 23022 31385 36873 39339 45139 41713 43463 52710 36846 39061 46702 53349 35252 42331 50642 48395 53300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31975000 24212 1984 22731 45453 36600 36600 1 9606 Homo sapiens -0.0003607011592521303 SEDTTGPITGLALTSVNK Unmodified 1802.9262 0.92617294 1595 Q92538;Q92538-2;Q92538-3;A0A669KBG8;A0A669KB10;A0A7P0RGV0;A0A7I2YQM2;A0A7I2V2L5;A0A7I2V514;A0A7I2YQ65;A0A7I2V3Y5;A0A7I2V529;A0A7I2V4K2;A0A7I2V2L4;A0A7I2V452;Q05BW6;Q504U7;A0A7I2V342;A0A7I2YQA6;A0A7I2V3Q4 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 yes no 0 0 0 7 0 1 58.74 58.789 3 0.0015659 17308 20230619_1887_Aki_TMTPro18x_K_F7 71.909 57.651 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24213 1595 22732 45454 36601 36601 1 9606 Homo sapiens 0.05682690044773153 SEDVWLEAAR Unmodified 1174.5619 0.56185177 3337 O94906;O94906-2 PRPF6 Pre-mRNA-processing factor 6 yes no 0 0 0 2.5 0.5 1 1 52.059 52.111 2 1.3258E-06 15374 20230619_1881_Aki_TMTPro18x_K_F2 174.92 134.03 117380 94839 104170 116460 106010 120810 126200 125220 141470 124420 122620 128090 138350 117450 129620 137440 128220 140000 108420 87013 107030 115900 110570 121930 126530 127610 142480 125930 127440 129510 140280 122570 131930 137920 122770 132900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230970000 24214 3337 22733 45455;45456 36602 36602 1 9606 Homo sapiens -0.018446677416250168 SEDYVDIVQGR Unmodified 1279.6044 0.60444487 2219 B4DGN8;B2R5M9;Q02809;Q02809-2 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes no 0 0 0 3 0 1 49.77 49.845 2 0.00019025 14049 20230619_1882_Aki_TMTPro18x_K_F3 142 126.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24215 2219 22734 45457 36603 36603 1 9606 Homo sapiens -0.02417317404069763 SEEAHAEDSVMDHHFR Oxidation (M) 1911.7806 0.78058811 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 1 0 1.5 0.5 1 1 31.637 31.669 5 4.1255E-11 6662 20230619_1880_Aki_TMTPro18x_K_F1 147.36 137.95 24490 18941 30754 34454 31891 36465 33533 42886 31697 32224 32697 43086 37692 30022 33788 45074 52135 61499 22685 17464 30763 33526 33060 36833 33694 43060 32454 33434 33795 42800 38137 32226 35504 45921 49770 58203 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82932000 24216 4246 22735 45458;45459 36604 36604 2710 1 9606 Homo sapiens -0.13883096023118924 SEEEFIHINNK Unmodified 1358.6466 0.64664404 3911 Q15046;Q15046-2;H3BVA8;J3KRL2 KARS Lysine--tRNA ligase yes no 0 0 0 3.5 1.12 1 1 1 1 46.28 46.349 3 6.8498E-05 12313 20230619_1883_Aki_TMTPro18x_K_F4 110.86 81.529 149140 112470 127220 184990 1270000 207840 291420 174730 266710 188510 188160 192390 209550 346920 170190 222810 229800 238540 137670 103570 146870 180930 1193000 210970 349090 181540 271380 190370 197760 200390 212570 345470 177330 226750 219350 226360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 607350000 24217 3911 22736 45460;45461;45462;45463 36605 36605 1 9606 Homo sapiens -0.0183334199566616 SEEEIDFLR Unmodified 1136.535 0.53496832 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;B0QY90 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 0 1 0 1 53.358 53.358 2 4.9789E-08 15708 20230619_1880_Aki_TMTPro18x_K_F1 199.02 129.67 78648 64629 67098 72629 71629 97630 81952 75269 106300 84840 85690 86545 96439 76190 90046 98913 95501 101500 72637 59242 69251 73013 74537 96280 82745 78704 106040 85358 89367 87452 97757 80170 92028 99149 91364 96358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74079000 24218 2176 22737 45464 36606 36606 1 9606 Homo sapiens -0.02783776352816858 SEEERVTETQK Unmodified 1334.6314 0.6313879 2184 P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;P35241-4;B7Z2S7;P35241-2;Q9NST9;A0A2R8Y4H6 RDX;DKFZp434I0812 Radixin yes no 0 0 1 1.5 0.5 1 1 33.741 33.769 3 0.0012584 7183 20230619_1881_Aki_TMTPro18x_K_F2 88.021 63.168 49342 31854 66570 57080 87741 79140 58939 81943 64036 62117 84140 87273 75772 62743 83157 42688 92771 76247 45697 29387 66414 55851 88508 78410 61368 82904 65755 64558 85056 86560 77929 64512 84721 45241 88555 72124 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47493000 24219 2184 22738 45465;45466 36607 36607 1 9606 Homo sapiens -0.022542535835327726 SEEGNVSAPGPESK Unmodified 1386.6263 0.62630252 1719;1783 A0A7R6KYT5;E9PR05;A0A3B3ITZ1;A0A3B3ISN4;H7C5V8;H7C5W4;A0A8I5KTQ4;Q1HA41;A0A4D6WN96;A0A4D6WLI1;B3W6H7;A0A8I5KXR3;Q03164-2;Q03164;Q03164-3 KMT2A;MLL-MAML2;TET1-MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 no no 0 0 0 2 0 1 39.032 39.099 3 0.0029931 9386 20230619_1881_Aki_TMTPro18x_K_F2 78.69 69.476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24220 1719;1783 22739 45467 36608 36608 1 9606 Homo sapiens -0.05154557446144281 SEEIPKPSK Unmodified 1013.5393 0.53932542 698 A0A024RBX6;O00625 PIR Pirin yes no 0 0 1 6.5 0.5 1 1 41.272 41.355 3 0.045084 10066 20230619_1886_Aki_TMTPro18x_K_F6 56.094 43.869 83334 57305 86136 82982 120110 107350 87348 104060 123320 111010 127770 115230 121990 100630 120300 82665 132430 109750 77001 52705 87709 82003 121060 106660 91143 106640 123770 111970 130540 116260 124580 103400 122810 85019 126440 104030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68360000 24221 698 22740 45468;45469 36609 36609 1 9606 Homo sapiens 0.033097328607595955 SEELSEAER Unmodified 1048.4673 0.46728269 1285 A0A1K0FUB6;Q8WWM9;K7EMC7 CYGB Cytoglobin yes no 0 0 0 1 0 1 35.195 35.195 2 2.4439E-09 8044 20230619_1880_Aki_TMTPro18x_K_F1 217.66 79.781 100760 68520 129430 109190 109880 102950 133410 144260 134050 121140 121520 95705 172580 108720 87947 69409 125520 87373 93294 63097 128660 106900 116050 105510 133250 143830 136050 122870 127230 98744 170230 109890 92853 71490 119470 82937 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108240000 24222 1285 22741 45470 36610 36610 1 9606 Homo sapiens -0.0550122628360441 SEELSEAERK Unmodified 1176.5622 0.5622457 1285 A0A1K0FUB6;Q8WWM9;K7EMC7 CYGB Cytoglobin yes no 0 0 1 1.5 0.5 1 1 37.828 37.859 3 2.0763E-07 8836 20230619_1881_Aki_TMTPro18x_K_F2 143.24 114.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24223 1285 22742 45471;45472 36611;36612 36612 2 9606 Homo sapiens -0.018972928124412647 SEENEEPMETDQNAKEEEK Oxidation (M) 2280.9176 0.91759468 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 1 1 1 0 1 37.653 37.653 3 0.003834 9051 20230619_1880_Aki_TMTPro18x_K_F1 69.737 51.679 12427 8494.4 8155.2 13861 10586 17559 14781 13607 18444 17961 19825 25654 28208 26242 14382 30398 29463 35721 11446 7824.4 8722.2 13583 10979 17360 14761 14298 18640 18166 20663 25714 27898 27263 15790 30726 28088 33849 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19804000 24224 3544 22743 45473 36613 36613 2210 1 9606 Homo sapiens -0.171627412352791 SEENEEPMETDQNAKEEEK Unmodified 2264.9227 0.92268006 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 0 1 1 0 1 40.635 40.635 3 3.298E-10 10383 20230619_1880_Aki_TMTPro18x_K_F1 130.85 117.66 34047 19982 26357 30680 24409 39553 28591 32743 50233 44560 44258 59349 71238 57867 31343 87249 86822 91155 31368 18405 27425 30196 25787 39118 29257 34226 49724 44886 46911 59561 70009 61304 35943 87230 82565 86522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40582000 24225 3544 22743 45474 36614 36614 1 9606 Homo sapiens -0.15918437372693006 SEEPEVPDQEGLQR Unmodified 1611.7376 0.73764389 3064 H3BT44;H3BPQ9;Q59FQ8;H3BR82;H3BMF4;Q9H2V7-5;Q9H2V7-3;Q9H2V7-2;Q9H2V7 SPNS1 Protein spinster homolog 1 yes no 0 0 0 1 0 1 42.374 42.374 2 0.0024855 11169 20230619_1880_Aki_TMTPro18x_K_F1 86.014 62.163 5224.3 3204.3 5452.4 6449.3 6267.7 8664.5 5583.3 8722.2 8271.7 7794.8 10188 7473.7 6848.8 7727.6 6683.4 8440.1 8257.6 9114.6 4825 2962.2 5539.5 6268.6 6446.2 8582.4 5762.3 8869 8343.4 7918.1 10195 7623.9 7101.2 7993.8 6896.7 8502.9 7891.5 8646.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50648000 24226 3064 22744 45475 36615 36615 1 9606 Homo sapiens -0.0437554280886161 SEEQLKEEGIEYK Unmodified 1580.757 0.75698235 425 B4DFL1;E9PEX6;B4DMK9;A0A024R713;P09622;P09622-2;P09622-3 DLD Dihydrolipoyl dehydrogenase;Dihydrolipoyl dehydrogenase, mitochondrial yes no 0 0 1 3 0.816 1 1 1 48.367 48.427 3 3.6679E-05 13449 20230619_1882_Aki_TMTPro18x_K_F3 116.9 80.455 153190 137620 147630 172620 196360 157720 230000 196210 106870 188580 188010 96396 123190 78940 175220 77717 74713 36021 141690 126240 151300 171290 200190 161660 226120 197640 119360 187890 185800 101580 129870 82083 171170 76152 72188 34797 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 351990000 24227 425 22745 45476;45477;45478 36616;36617 36617 2 9606 Homo sapiens -0.01016586517948781 SEEQPMDLENR Oxidation (M) 1362.5722 0.57215846 4397 Q96T23-2;Q96T23;H0YER1;Q96T23-3;Q05DG0;H0YCN2 RSF1 Remodeling and spacing factor 1 yes no 0 1 0 1 0 1 34.915 34.915 2 0.0051453 7953 20230619_1880_Aki_TMTPro18x_K_F1 82.008 68.971 12474 8685.6 10043 14835 14599 17080 13228 18115 21773 15329 19257 25515 24898 18766 13245 29103 28671 31662 11505 8004.8 10503 14490 14798 17110 13685 18350 21579 15956 20145 25220 24681 20133 14613 29167 27304 30035 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10444000 24228 4397 22746 45479 36618 36618 2760 1 9606 Homo sapiens -0.09462472869358862 SEETLDEGPPK Unmodified 1200.551 0.55101232 3774 Q00688;Q53GD8 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 1.67 0.471 1 2 42.693 42.747 2;3 5.8865E-12 11292 20230619_1880_Aki_TMTPro18x_K_F1 240.13 200.25 347650 253960 323850 355010 372950 382070 376180 371610 462800 409990 476060 465230 451520 423310 392980 423960 543490 445500 321070 233420 331850 350470 383520 384060 381800 381450 466880 414130 486580 468350 459240 437880 409060 427230 517870 423270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 600320000 24229 3774 22747 45480;45481;45482 36619;36620 36619 2 9606 Homo sapiens -0.04124114906585419 SEETNTEIVECILK Unmodified 1663.7975 0.79746695 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 2.5 0.5 1 1 61.357 61.377 3 0.00074496 18907 20230619_1882_Aki_TMTPro18x_K_F3 85.287 55.598 62272 48247 52404 56569 48534 54092 57973 59424 48589 68297 72463 53319 60017 51387 72644 57915 54314 55868 57487 44252 54021 56432 50968 55020 57660 60567 51041 68040 72584 54791 62209 53431 72557 58035 52155 53079 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59785000 24230 3588 22748 45483;45484 36621 36621 1 9606 Homo sapiens -0.007879881898134045 SEEVATKEELVADAK Unmodified 1617.8097 0.8097462 1958 E7ESP9;A5YM63;P07197;P07197-2;Q9UK51 NEFM;NEF3 Neurofilament medium polypeptide yes no 0 0 1 2.8 0.748 2 2 1 51.668 51.715 3;4 2.5824E-07 14932 20230619_1882_Aki_TMTPro18x_K_F3 129.38 96.183 153540 124290 147840 138500 108940 118290 99973 101400 123070 155960 212140 207870 154860 166620 211780 163550 193070 171820 141920 113930 149950 138510 116040 120850 102260 106320 127610 156220 211010 207220 162740 172870 213050 165060 184760 163190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 905480000 24231 1958 22749 45485;45486;45487;45488;45489 36622;36623 36623 2 9606 Homo sapiens 0.025553715448495495 SEEWADNHLPLTDAELAR Unmodified 2065.9705 0.97049737 1189 A0A140VJN8;O60664-4;O60664-3;O60664;K7ERZ3;O60664-2 PLIN3 Perilipin-3 yes no 0 0 0 1 0 1 53.844 53.844 3 2.8436E-14 15980 20230619_1880_Aki_TMTPro18x_K_F1 132.4 122.87 21621 17634 23201 22647 22104 26442 28343 26868 24568 25947 27382 29942 30002 29014 28103 27835 28755 33847 20004 16185 23424 22513 23208 26451 28103 27397 25362 26389 28102 30175 30467 29890 28646 28331 27541 32065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26255000 24232 1189 22750 45490 36624 36624 1 9606 Homo sapiens -0.01984905809013071 SEFEQNLSEK Unmodified 1209.5513 0.55134667 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 0 0 2.25 0.829 1 1 2 47.113 47.172 2;3 1.2003E-09 12846 20230619_1882_Aki_TMTPro18x_K_F3 208.63 154.66 254090 210190 247200 300870 287660 339430 313580 304200 391250 296580 345910 330970 364870 308960 301460 372110 387630 329410 234910 193150 252670 296700 296570 339340 316970 313070 392030 301450 357690 333930 368870 322670 312780 370360 369650 313540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 427750000 24233 3954 22751 45491;45492;45493;45494 36625;36626 36626 2 9606 Homo sapiens -0.045046951867107055 SEFGEVFLAK Unmodified 1125.5706 0.57062555 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-3;B3KP36;C9JQR6 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 6.5 0.5 1 1 60.891 60.934 3 0.00070022 18492 20230619_1886_Aki_TMTPro18x_K_F6 87.149 53.924 37768 38175 41483 34518 33182 45293 42552 41107 41384 50021 50537 51254 52463 45977 56427 49564 44792 52067 35003 34905 41677 35348 35420 44894 42349 42513 42627 50097 51531 51782 53657 47789 56632 49919 43019 49400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54636000 24234 3847 22752 45495;45496 36627;36628 36627 2 9606 Homo sapiens 0.012863058948596517 SEFGSVDGPLPHPR Unmodified 1493.7263 0.72629134 4038 Q5JRA6-2;Q5JRA6;Q5JRA6-4 MIA3 Melanoma inhibitory activity protein 3 yes no 0 0 0 5 0 1 44.787 44.864 3 5.4892E-05 11599 20230619_1885_Aki_TMTPro18x_K_F5 97.631 73.131 39773 33106 42470 33507 46393 49043 43065 43323 70647 41597 45973 41862 48926 39607 40392 44691 39487 44710 36802 30317 42917 34046 47820 48303 44453 44588 69334 42217 48411 42434 49426 41211 41200 44821 37826 42447 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19081000 24235 4038 22753 45497 36629 36629 1 9606 Homo sapiens -0.0008227532168803009 SEFLSTAPR Unmodified 1006.5084 0.50835964 278 B4DYU9;A0A024R411;Q13416 ORC2L;ORC2 Origin recognition complex subunit 2 yes no 0 0 0 6.5 0.5 1 1 44.043 44.131 2 0.0055191 10963 20230619_1887_Aki_TMTPro18x_K_F7 93.267 79.688 60815 45710 60494 60432 63915 75521 69707 70753 91937 71459 88746 96483 82950 74898 81142 74956 92091 90876 56203 41982 61539 60015 66348 75086 70636 72627 92175 72978 91000 96040 84795 77957 83110 76245 87997 86150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75803000 24236 278 22754 45498;45499 36630 36630 1 9606 Homo sapiens 0.005365795465081646 SEFVILRDEK Unmodified 1234.6558 0.65575216 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 1 5 0.816 1 1 1 49.554 49.617 3 0.0013158 13579 20230619_1885_Aki_TMTPro18x_K_F5 93.928 61.085 386880 345340 356550 333330 317160 301360 357720 325030 361720 440220 457340 472460 465900 407270 489750 503520 465630 505430 357710 316050 363890 337590 333270 308150 358620 333660 372430 439520 465360 475920 476350 427290 496350 504530 446020 479890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 386830000 24237 1102 22755 45500;45501;45502 36631 36631 1 9606 Homo sapiens 0.04781051360669153 SEFYANEACK Unmodified 1217.5023 0.50228798 805 E9KL42;A0A087WT95;Q86TX2;P49753;G3V4F2;B7ZMC1;A1L172;B3KSA0;P49753-2 ACOT2;ACOT1 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial yes no 0 0 0 4 0 1 44.942 44.987 2 1.989E-05 11724 20230619_1883_Aki_TMTPro18x_K_F4 160.53 128.6 36336 36178 39580 40740 46128 50519 56203 57645 62478 54971 64946 55322 59992 51970 47100 71162 81818 70556 33669 33141 40056 40920 47649 50510 56269 58299 63345 55714 66216 56116 60822 54732 50165 71089 77869 67062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51333000 24238 805 22756 45503 36632 36632 1 9606 Homo sapiens -0.09776306747335184 SEGEGEAASADDGSLNTSGAGPK Unmodified 2105.8985 0.89851422 461 J3KQS6;A0A024R7L2;Q9NWV8;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;Q9NWV8-3;M0R2I2 BABAM1;HSPC142 BRISC and BRCA1-A complex member 1 yes no 0 0 0 2 0 1 42.116 42.195 3 7.93E-12 10826 20230619_1881_Aki_TMTPro18x_K_F2 118.37 111.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24239 461 22757 45504 36633 36633 1 9606 Homo sapiens -0.1101990974407272 SEGELLER Unmodified 931.46108 0.4610751 1908 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 0 1 0 1 40.074 40.074 2 0.027374 10115 20230619_1880_Aki_TMTPro18x_K_F1 82.426 39.511 71386 57873 68936 70410 141360 142480 109830 107770 136480 98818 116910 117660 120830 94860 98533 128160 136720 130480 65986 53092 71329 70989 140190 137830 113300 112180 136670 101020 121020 117890 122140 100390 102850 128290 130400 123930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90853000 24240 1908 22758 45505 36634 36634 1 9606 Homo sapiens -0.0073969972447684995 SEGETIMSSSMGK Oxidation (M) 1358.5694 0.56938127 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 1 0 3.5 0.5 1 1 42.987 43.042 3 4.1661E-05 10840 20230619_1883_Aki_TMTPro18x_K_F4 111.12 97.722 47819 33759 42222 52047 49760 63771 54235 53764 63545 55837 68418 62721 67908 51808 55472 68586 72518 62740 44136 31069 43544 51165 51303 63315 54707 55676 64362 56550 69888 63042 68705 54700 57636 68288 69152 59689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101950000 24241 2181 22759 45506;45507 36635 36635 1350 1 9606 Homo sapiens -0.09556064318553581 SEGETIMSSSMGK Unmodified 1342.5745 0.57446665 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 0 4.5 0.5 1 1 48.435 48.492 3 1.1696E-06 13262 20230619_1883_Aki_TMTPro18x_K_F4 141.38 115.26 181920 148920 163840 188960 173090 216360 192810 196590 223900 249820 252800 251220 283690 230440 239380 295810 273710 300200 168080 136670 168270 187850 179870 216180 194260 203600 227650 249640 259320 254330 286390 241920 246410 296280 261740 284990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 149160000 24242 2181 22759 45508;45509 36636;36637 36636 2 9606 Homo sapiens -0.08311760455922013 SEGFDTYR Unmodified 973.41412 0.4141249 3437 Q6FHF5;P12004;Q6FI35;B4DUA2;Q7Z6A3;Q7Z6A2;Q7Z6A1 PCNA Proliferating cell nuclear antigen yes no 0 0 0 3 0.816 1 1 1 39.484 39.54 2 2.1813E-10 9405 20230619_1882_Aki_TMTPro18x_K_F3 221.56 173.66 2044600 1616200 1781200 1663100 1628600 2082100 1838000 1814200 2189700 2262700 2493200 2046800 2638100 2018700 1691800 2980300 2629800 2043900 1888100 1480500 1828500 1682300 1712800 2067600 1852800 1883500 2223200 2256700 2545500 2090100 2642100 2133800 1795700 2923300 2503000 1953400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4223099999.9999995 24243 3437 22760 45510;45511;45512 36638;36639 36639 2 9606 Homo sapiens -0.07364559275617921 SEGGFIWACK Unmodified 1153.5226 0.5226295 274 V9HW78;B2R5M8;A0A024R3Y6;O75874;Q6FIA4;Q6FI37;Q0QER2;B4DXS4 HEL-216;IDH1 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 5.33 3.09 1 1 1 56.284 56.342 3 0.0010313 16273 20230619_1888_Aki_TMTPro18x_K_F8 79.974 52.876 140540 124460 135150 122220 113310 147300 136630 128740 154470 164850 182000 188100 165940 173980 175870 183490 199670 213630 129980 113930 137360 124060 120250 146650 137020 133790 157460 165390 184810 189390 170580 180320 180030 185920 190910 202540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334390000 24244 274 22761 45513;45514;45515 36640;36641 36641 2 9606 Homo sapiens -0.04799091296854385 SEGGLSAAPAR Unmodified 1014.5094 0.50942227 706 A0A024RC62;Q6PK37;H0YLI7;Q7Z6K5-2;A0A0A6YYH1;P59780 AP3S2;C15orf38-AP3S2 AP-3 complex subunit sigma-2 yes no 0 0 0 4 0 1 33.649 33.703 2 0.00012637 7013 20230619_1883_Aki_TMTPro18x_K_F4 135.63 110.38 22026 15283 22609 24898 25311 31597 30508 35477 40361 29789 39392 36644 40872 33068 40350 24852 42472 34852 20352 14077 22984 24432 26257 31500 30767 35799 40466 30633 40510 36765 41628 33814 41064 25724 40564 33025 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18077000 24245 706 22762 45516 36642 36642 1 9606 Homo sapiens 0.0027479391541191944 SEGVVAVLLTK Unmodified 1114.6598 0.6597749 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 2 0.816 1 1 1 62.11 62.123 3 0.00012149 19325 20230619_1880_Aki_TMTPro18x_K_F1 117.98 103.77 387580 293580 362660 306940 233020 312940 312600 296760 405750 411860 375560 356290 363150 351480 392540 442100 388120 385070 358030 269020 368210 309280 255110 315670 313630 307400 406960 408480 386150 364130 372740 367290 398690 439510 371380 366350 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 711420000 24246 3606 22763 45517;45518;45519 36643;36644;36645 36643 3 9606 Homo sapiens 0.10703140854366211 SEHPGLSIGDTAK Unmodified 1310.6466 0.64664404 4068;3509 Q5U071;D6R9A6;P26583 HMGB2 High mobility group protein B2 no no 0 0 0 5.5 1.71 1 1 1 1 1 1 40.748 40.805 3 7.2428E-16 9566 20230619_1887_Aki_TMTPro18x_K_F7 209.25 177.24 1140900 615600 1090900 1303600 1116600 1244700 1136100 1183200 1183200 1305800 1462400 1973400 1583100 1408600 1324600 1689800 1822000 2139500 1052300 569950 1113900 1257700 1158400 1260500 1146600 1217000 1214500 1332700 1495900 1952400 1600400 1486400 1381000 1717500 1740700 2026100 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 3237199999.9999995 24247 4068;3509 22764 45520;45521;45522;45523;45524;45525 36646;36647;36648;36649;36650;36651;36652 36651 7 9606 Homo sapiens 0.0037465800435256824 SEHPPLCGR Unmodified 1051.4869 0.48691269 3931 Q15393;A8K6V3;B3KQH1;B3KM77;Q15393-3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 5 0 1 28.843 28.916 3 0.028818 5320 20230619_1885_Aki_TMTPro18x_K_F5 48.423 39.101 8713.2 7697.5 11146 14633 20849 14880 10167 13895 13504 8123 12074 15393 13461 23717 10071 11045 8869.2 11665 8079.5 7098.7 11272 14192 20538 15015 10986 14108 13505 8762.4 12534 15571 13613 23457 10241 11349 8516.9 11062 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3406700 24248 3931 22765 45526 36653 36653 1 9606 Homo sapiens -0.03677128753838588 SEIDLFNIR Unmodified 1105.5768 0.57677356 3416 V9HWE0;P08758;D6RBL5;D6RBE9 HEL-S-7;ANXA5 Annexin;Annexin A5 yes no 0 0 0 5.5 0.5 1 1 60.002 60.058 2 9.3051E-05 17906 20230619_1885_Aki_TMTPro18x_K_F5 156.75 124.28 207480 162680 201640 237520 379650 415960 297740 295330 329650 334810 341760 323850 354530 282740 360340 338830 331380 359890 191760 149560 208230 235790 378070 404200 305820 310910 334770 336030 350590 327910 361510 296130 364610 340850 317540 341500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 380590000 24249 3416 22766 45527;45528 36654 36654 1 9606 Homo sapiens 0.028208241263882883 SEIDLLNIR Unmodified 1071.5924 0.59242362 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;E5RFF0;H0YC77;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 0 4.75 0.829 2 1 1 57.506 57.55 2;3 6.77E-05 16877 20230619_1885_Aki_TMTPro18x_K_F5 160.88 104.87 2423900 2083600 2151700 2606400 2502300 2974800 2552600 2476100 2689100 2727800 2982300 2980700 3018000 2747700 3160400 3164300 3308900 3656300 2239900 1911500 2216600 2593000 2574900 2968200 2575300 2571400 2744100 2751500 3048500 3007300 3087000 2864000 3219500 3200600 3166900 3466300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2644400000 24250 1062;1064 22767 45529;45530;45531;45532 36655;36656;36657 36657 3 9606 Homo sapiens 0.05949110643427957 SEIEYYAMLAK Unmodified 1316.6322 0.63223953 568 A0A024R9D3;P62888;E5RI99 RPL30 60S ribosomal protein L30 yes no 0 0 0 7 0 1 61.822 61.861 2 7.9492E-06 18630 20230619_1887_Aki_TMTPro18x_K_F7 177.36 132.2 146540 84711 82442 124760 96691 135950 101340 114260 175680 167160 147790 205230 206660 189030 121050 254960 233950 246970 134770 77992 89568 122720 99999 136010 104180 119640 173760 167340 155770 205990 205230 198900 131570 254270 222840 234610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 243220000 24251 568 22768 45533 36658 36658 1 9606 Homo sapiens -0.013411304681767433 SEIHLFLQR Unmodified 1141.6244 0.62439245 1304 Q15477;A0A8V8TLC0;A0A1U9X8J0;A0A1U9X8J1;A0A1U9X8J2;A0A1U9X8J6;Q96BC0;O76046;Q9NPK3;A0A8V8TL97;H7C4L3;H7C5N0;A0A8V8TLA2;B4E0N1;B4DM01;A0A8V8TN04;A0A1U9X8I7;A0A1U9X8I9;B4DSY1;Q59F56;A0A024RCU1;A0A8V8TLR3 SKIV2L;SKI2W Helicase SKI2W yes no 0 0 0 8 0 1 48.857 48.923 3 0.021212 13061 20230619_1888_Aki_TMTPro18x_K_F8 65.347 48.715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24252 1304 22769 45534 36659 36659 1 9606 Homo sapiens 0.059245231172326385 SEIIPMFSNLASDEQDSVR Unmodified 2136.9997 0.99974859 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 3.5 0.5 1 1 63.009 63.015 3 5.423199999999999E-40 19607 20230619_1883_Aki_TMTPro18x_K_F4 263.15 233.07 25495 21994 25413 28527 20696 27667 22503 26145 28419 33314 32533 31819 33000 29525 33445 36001 33760 38949 23582 20185 25772 28256 21968 27995 22795 27001 28807 33232 33205 32295 33694 30877 34035 36230 32334 36944 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162040000 24253 1860 22770 45535;45536 36660;36661 36661 2 9606 Homo sapiens -0.023271295750419085 SEIQAEQDR Unmodified 1074.4942 0.49416614 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 0 0 1 0 1 31.878 31.878 2 3.4654E-06 6715 20230619_1880_Aki_TMTPro18x_K_F1 216.42 179.86 38506 18611 50267 48575 77155 76890 61131 72574 54869 32314 60459 58991 52707 50208 58901 21947 60287 51380 35604 17311 50472 46908 77458 75442 62411 73316 56375 35644 61444 58374 54359 50587 59647 24291 57607 48522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65508000 24254 3954 22771 45537 36662 36662 1 9606 Homo sapiens -0.04010117672441993 SEISELRR Unmodified 988.53016 0.53015772 2775 CON__P02533;P02533;CON__Q04695;CON__Q9QWL7;Q04695;Q13092;A0A024R1X6;Q14666 KRT14;KRT17;K14 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 yes no 0 0 1 4 0.816 1 1 1 34.911 34.978 3 0.0026376 7498 20230619_1883_Aki_TMTPro18x_K_F4 105.81 31.553 + 187820 152840 187430 186400 211550 206960 236500 214570 82348 216790 245170 260620 292020 219000 240900 288020 285410 244860 173660 140220 190780 185820 217860 207970 232410 218810 99663 219910 246120 261280 293870 230940 248560 285800 272370 233170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 266570000 24255 2775 22772 45538;45539;45540 36663;36664 36663 2 9606 Homo sapiens 0.0354338429509653 SEITELRR Unmodified 1002.5458 0.54580778 1272 P13645;CON__P13645;A0A1B0GVI3;CON__P02535-1 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 1 4.5 0.5 1 1 35.036 35.104 3 0.00010335 7572 20230619_1885_Aki_TMTPro18x_K_F5 162.25 111.55 + 80040 63855 95532 68737 2479800 154380 130200 143750 252780 68495 117110 104210 109390 541160 127910 62905 93050 95190 74117 58516 127420 67249 2304100 156680 270840 145430 248120 75381 126150 118970 115810 516490 127450 73331 89381 90062 2 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 312550000 24256 1272 22773 45541;45542 36665;36666 36666 2 9606 Homo sapiens 0.04463670812140208 SEIVGSIK Unmodified 831.47018 0.47018322 460 Q9BXS5-2;A0A024R7K8;Q9BXS5;B3KNH5;E7ENJ6;B4DN99;Q59EK3;B4DDG7;K7EJL1 AP1M1 AP-1 complex subunit mu-1 yes no 0 0 0 7 0 1 47.474 47.562 2 0.0014143 12414 20230619_1887_Aki_TMTPro18x_K_F7 143.01 74.589 150040 129460 134610 150350 146050 174700 146400 151410 197290 208850 192380 183910 202620 163730 166990 219440 233380 197290 138670 118690 138300 150440 151040 174280 149190 157780 198050 207250 197950 187170 204800 172540 174370 218220 222400 187750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 243940000 24257 460 22774 45543 36667 36667 1 9606 Homo sapiens 0.047706936318604676 SELDMLDIR Oxidation (M) 1106.5278 0.52777445 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;A0A0S2Z377 ANXA6 Annexin A6;Annexin no no 0 1 0 2 0 1 50.779 50.831 2 0.0023203 14755 20230619_1881_Aki_TMTPro18x_K_F2 100.76 73.502 169140 202750 253840 179420 397290 270220 320220 333880 228510 216010 232180 210270 181330 170210 291000 200970 204350 216950 157500 185270 252360 184740 397370 268370 324590 333290 238260 224240 235980 212520 191900 178490 288710 202660 196450 205850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 381860000 24258 1062;1064 22775 45544 36668 36668 630 1 9606 Homo sapiens -0.02122832224904414 SELDMLDIR Unmodified 1090.5329 0.53285983 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;A0A0S2Z377 ANXA6 Annexin A6;Annexin no no 0 0 0 2.5 0.5 1 1 57.464 57.488 2 5.485E-05 17593 20230619_1881_Aki_TMTPro18x_K_F2 162.97 91.627 330720 281440 327520 351970 296380 372060 341480 344950 332020 519300 545620 573260 590620 513640 463420 622930 627760 661380 305860 258210 332700 349910 311790 374020 341720 358960 348040 516770 551790 577450 595440 537570 483430 625880 599280 627650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 944660000 24259 1062;1064 22775 45545;45546 36669;36670 36669 2 9606 Homo sapiens -0.008785283622728457 SELDQLR Acetyl (Protein N-term) 901.45051 0.45051041 1179 B2R6K4;A0A140VJJ8;P62873;F6X3N5;A0A2L0WW42;P62873-2;F6UT28;A0A994J6X8;B1AKQ8 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes no 1 0 0 1 0 1 46.596 46.596 2 0.0032819 12973 20230619_1880_Aki_TMTPro18x_K_F1 132.94 86.59 91353 70771 76764 88837 93319 100390 94825 101920 127750 100300 114200 125600 111320 101180 98563 113780 153060 153430 84332 64956 79513 88376 95735 100670 96532 103960 127640 102270 117740 125510 113220 105870 103540 116300 145920 145310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118130000 24260 1179 22776 45547 36671 36671 1 9606 Homo sapiens -0.0041568237888895965 SELDQLRQEAEQLK Acetyl (Protein N-term) 1727.869 0.86899241 1179 B2R6K4;A0A140VJJ8;P62873;F6X3N5;A0A2L0WW42;P62873-2;F6UT28;A0A994J6X8;B1AKQ8 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes no 1 0 1 3 0 1 62.266 62.295 3 1.3751E-35 19358 20230619_1882_Aki_TMTPro18x_K_F3 74.475 41.066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24261 1179 22777 45548 36672 36672 1 9606 Homo sapiens 0.03417267559075299 SELELLK Unmodified 830.47493 0.47493425 4215 Q8IYS1 PM20D2 Peptidase M20 domain-containing protein 2 yes yes 0 0 0 5 0 1 54.84 54.907 2 0.053956 15796 20230619_1885_Aki_TMTPro18x_K_F5 77.282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24262 4215 22778 45549 36673 36673 1 9606 Homo sapiens 0.05291577774619327 SELEQLR Acetyl (Protein N-term) 915.46616 0.46616048 3730;4542 Q6FHM2;P62879;C9JIS1;C9JXA5;C9JZN1;Q9HAV0;A0A7I2S2S9;A8K3F6;H7C5J5;A0A6Q8PFW8;A0A6Q8PFE0;A0A6Q8PFV8;C9JD14 GNB2;GNB4 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein subunit beta-4 no no 1 0 0 1 0 1 47.229 47.229 2 0.00064951 13196 20230619_1880_Aki_TMTPro18x_K_F1 146.21 125.23 2116 3373.8 2887.1 2368.3 2188.8 3265.5 1972.3 2736.4 3215.2 2135.1 1306.9 2969.1 3157.2 3499.6 3879.2 3387.4 3231.1 3136.8 1974.1 3076.3 2855.3 2491.3 2330.4 3223.5 2042.6 2813.7 3130 2219.1 1526 2990.6 3204.3 3581.5 3893.1 3394.3 3097.1 2982.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136070000 24263 3730;4542 22779 45550 36674 36674 1 9606 Homo sapiens 0.005046041381433497 SELEQLRQEAEQLR Acetyl (Protein N-term) 1769.8908 0.89079049 3730;4542 Q6FHM2;P62879;C9JIS1;C9JXA5;C9JZN1;Q9HAV0;A0A7I2S2S9;A8K3F6;H7C5J5;A0A6Q8PFW8;A0A6Q8PFE0;A0A6Q8PFV8;C9JD14 GNB2;GNB4 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein subunit beta-4 no no 1 0 1 1.5 0.5 1 1 60.41 60.416 2 1.5623E-69 18766 20230619_1881_Aki_TMTPro18x_K_F2 149.96 94.409 14681 13881 16227 14528 17696 16357 16507 18608 18396 17486 16330 20466 20593 18485 19511 18993 21856 23375 13600 12709 16362 14658 18205 16467 16781 18816 18564 17819 17071 20559 20841 19161 19985 19326 20900 22150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 312000000 24264 3730;4542 22780 45551;45552 36675;36676 36676 2 9606 Homo sapiens 0.03664072307628885 SELGNQSPSTSSR Unmodified 1348.6219 0.62188585 955 A0A0A0MSK5;Q5JTV8;Q5JTV8-3;J3KN66;H0YD16 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 0 0 0 3.5 0.5 1 1 32.126 32.195 2 9.0007E-21 6379 20230619_1883_Aki_TMTPro18x_K_F4 223.71 173.1 24600 13584 34385 35000 55361 63634 39724 53979 46203 35197 54494 63454 54590 51594 52257 24250 62742 65265 22775 12622 34437 33908 55428 61885 41203 55252 46992 37447 55588 62663 55634 52188 53596 27202 59947 61545 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40774000 24265 955 22781 45553;45554 36677;36678 36678 2 9606 Homo sapiens -0.03848021869043805 SELHIENLNMEADPGQYR Oxidation (M) 2130.964 0.96403178 1707 B4DY23;A0A7P0TA85;Q54A51;B4DNE1;P35613-2;P35613;A0A087WUV8;P35613-3;P35613-4;A0A7P0TB04;A0A7P0T8A7 hEMMPRIN;BSG Basigin yes no 0 1 0 3 0 1 46.994 47.073 3 6.1861E-05 12820 20230619_1882_Aki_TMTPro18x_K_F3 89.913 81.122 42420 39349 43458 49361 53629 52658 50115 52776 45103 58198 66525 71825 63589 50370 56490 66235 70712 84426 39266 36092 44240 49066 54728 53019 50612 54054 47140 58886 67153 71556 64632 53543 58411 67282 67615 79945 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135140000 24266 1707 22782 45555 36679 36679 1109 1 9606 Homo sapiens -0.05621167032086305 SELHIENLNMEADPGQYR Unmodified 2114.9691 0.96911716 1707 B4DY23;A0A7P0TA85;Q54A51;B4DNE1;P35613-2;P35613;A0A087WUV8;P35613-3;P35613-4;A0A7P0TB04;A0A7P0T8A7 hEMMPRIN;BSG Basigin yes no 0 0 0 4.5 1.12 1 1 1 1 50.931 50.994 3 7.1757E-14 14555 20230619_1882_Aki_TMTPro18x_K_F3 157.47 153.75 216380 159910 191230 199010 196000 217350 238560 245720 248210 308810 294510 338080 340760 308110 293510 392380 356650 418650 199770 146780 196500 198070 204380 219050 238420 250690 254500 309440 302320 340820 344240 323220 303350 394090 341060 397130 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1272100000 24267 1707 22782 45556;45557;45558;45559 36680;36681;36682;36683 36680 4 9606 Homo sapiens -0.043768631694547366 SELLVEQGR Unmodified 1029.5455 0.54547343 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7;Q32P42;A8K3I2;E7EN38;A0A494C122;E7ESD9;A0A494BZX5;A0A494C0Y7 RAD50 DNA repair protein RAD50 yes no 0 0 0 3 0 1 42.95 43.016 2 0.0023169 10879 20230619_1882_Aki_TMTPro18x_K_F3 107.57 79.4 167810 136230 148250 169790 199420 194500 191200 203970 242270 190650 244780 242510 237170 202690 232180 254060 265590 257640 155020 125010 153100 169040 202790 195080 194830 207330 243790 195030 250680 242650 242110 213070 238140 254620 253730 244700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220860000 24268 4309 22783 45560 36684;36685 36684 2 9606 Homo sapiens 0.03188251092274186 SELLVEQYLPLTEEELEK Unmodified 2161.1042 0.10419689 4102 Q6FHZ7;Q99541;B4DJK9 ADFP;PLIN2 Perilipin;Perilipin-2 yes no 0 0 0 3 0 1 64.591 64.623 3 7.1599E-10 20351 20230619_1882_Aki_TMTPro18x_K_F3 138.55 116.07 18371 17947 19252 23478 20526 17669 21833 23062 24542 26729 28219 23385 31236 25026 24242 31376 29446 25036 17015 16466 19523 23179 21212 18446 22031 23288 25009 26709 28871 23977 31443 26097 25099 31055 28093 23862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36930000 24269 4102 22784 45561 36686 36686 1 9606 Homo sapiens 0.07008895453327568 SELNLLVEK Unmodified 1043.5863 0.58627561 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;E9PNZ4;A0A5F9ZGX0;E9PLY5;A0A669KBB0 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 0 5.5 0.5 1 1 57.814 57.878 3 0.091552 17260 20230619_1886_Aki_TMTPro18x_K_F6 33.886 7.767 19938 16006 22855 24002 26379 28020 24592 24259 31893 27031 28621 28410 30883 26642 27012 34714 26994 34676 18456 14718 23032 23623 27068 27938 25125 25119 31941 27230 29613 28736 31266 27966 27581 34727 25881 32908 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18016000 24270 1566 22785 45562;45563 36687 36687 1 9606 Homo sapiens 0.06622592411895312 SELPTDNSETVENT Unmodified 1534.6635 0.66347589 1196 B4DS64;A0A804HL83;Q2YDB3;A0A140VJQ7;O43422 PRKRIR 52 kDa repressor of the inhibitor of the protein kinase yes no 0 0 0 1 0 1 46.288 46.288 2 0.0035443 12861 20230619_1880_Aki_TMTPro18x_K_F1 80.916 71.261 11887 10461 13580 15302 12944 15945 16222 12560 13311 16649 17016 19517 17781 15926 14844 17314 17995 19707 11010 9613 13660 15054 13580 15990 16074 13192 13887 16689 17335 19547 17990 16618 15334 17505 17199 18686 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21760000 24271 1196 22786 45564 36688 36688 1 9606 Homo sapiens -0.08246930691052512 SELQDMEAQQVNEAESAR Unmodified 2033.896 0.8960118 2156 B4E1D4;A8KAL2;Q8TBA6-2;Q8TBA6 GOLGA5 Golgin subfamily A member 5 yes no 0 0 0 1 0 1 50.14 50.14 3 1.0128E-06 14453 20230619_1880_Aki_TMTPro18x_K_F1 110.77 101.24 21087 17670 15343 22264 20208 26631 21912 18458 33091 25942 27451 23286 28807 21887 26850 29661 27410 25974 19458 16214 16186 22143 20722 26401 22316 19634 32830 25769 28457 23734 29249 23044 27384 29468 26211 24714 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20370000 24272 2156 22787 45565 36689 36689 1 9606 Homo sapiens -0.07958036682703096 SELSQNISAR Unmodified 1103.5571 0.55710075 2306 Q659C9;Q9NVU3;B2RCJ6;Q9BZH6 DKFZp434L1715;WDR11 WD repeat-containing protein 11 yes no 0 0 0 5 0 1 38.025 38.117 2 1.3289E-06 8729 20230619_1885_Aki_TMTPro18x_K_F5 182.16 151.54 53519 45605 49349 50036 58957 59758 60209 56413 70182 57643 64407 69187 71520 61278 67813 74456 77888 78093 49468 41789 50622 50315 60489 59643 60928 57907 70672 58571 66706 69461 72610 64163 69613 74794 74426 74134 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37024000 24273 2306 22788 45566 36690 36690 1 9606 Homo sapiens 0.009464481156101101 SELVANNVTLPAGEQR Unmodified 1696.8744 0.87441214 3578;668;675 A0A024RBE7;P42167;G5E972;P42167-3;A0A024RBH7;P42167-2;Q59G12;P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 0 0 0 4.5 0.5 2 2 48.741 48.798 2;3 1.3168E-25 13227 20230619_1885_Aki_TMTPro18x_K_F5 281.12 207.13 296800 265470 311470 319390 321140 378070 362530 326150 386920 332870 335570 337700 371150 307280 463250 353590 354100 364890 274710 243420 315430 318900 334020 376620 363810 337070 390670 336370 348590 341600 381890 320500 462810 355600 339930 346410 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1341300000 24274 668;675;3578 22789 45567;45568;45569;45570 36691;36692;36693;36694 36693 4 9606 Homo sapiens 0.05384991141499995 SELVVEVK Unmodified 901.51205 0.51204804 245 B2R642;A8K6A6;A0A024R3I5;P43121 MCAM Cell surface glycoprotein MUC18 yes no 0 0 0 4.5 0.5 1 1 50.5 50.554 2 0.0023147 14244 20230619_1883_Aki_TMTPro18x_K_F4 128.69 63.649 64544 48123 46784 74036 44057 49355 63575 56983 82387 76551 85831 100080 90536 86628 65855 133100 123410 133610 59513 44278 49133 72250 46580 51937 63520 58294 82962 77046 88163 100130 91224 92198 70955 132810 117590 126860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126210000 24275 245 22790 45571;45572 36695 36695 1 9606 Homo sapiens 0.057352493203779886 SEMADLQQEHQR Oxidation (M) 1486.6471 0.64705474 873 J3KPF9;Q2UVF2;A0A087X011;E9PES4;B4DHG8;Q9Y496 KIF3A Kinesin-like protein;Kinesin-like protein KIF3A yes no 0 1 0 1 0 1 28.545 28.545 3 1.5591E-07 5420 20230619_1880_Aki_TMTPro18x_K_F1 162.49 151.05 2478.3 2404.7 2605.3 2736.3 5426.7 4775 3713.3 5334.3 4262.1 2205.6 3437.8 3800.5 4287.1 4388.8 4790.2 4318.9 5669.8 4736.9 2295.2 2203.2 2677.8 2764.2 5358.1 4688.4 3862.4 5319.9 4273 2448 3608.2 3811.7 4379.5 4499.9 4907.3 4366.8 5409.9 4498.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7644500 24276 873 22791 45573 36696 36696 505 1 9606 Homo sapiens -0.07680290338112172 SEMADLQQEHQR Unmodified 1470.6521 0.65214012 873 J3KPF9;Q2UVF2;A0A087X011;E9PES4;B4DHG8;Q9Y496 KIF3A Kinesin-like protein;Kinesin-like protein KIF3A yes no 0 0 0 2 0 1 34.676 34.733 3 4.6183E-10 7552 20230619_1881_Aki_TMTPro18x_K_F2 184.98 159 13952 8792.1 12479 14221 16776 18097 13628 17854 22384 15964 19358 19431 21639 16049 18888 15390 21307 19357 12872 8100.7 12872 13958 17020 17991 14201 18191 22168 16351 20099 19451 21867 16647 19367 15712 20350 18351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37346000 24277 873 22791 45574 36697 36697 1 9606 Homo sapiens -0.06435986475503341 SEMEVQDAELK Oxidation (M) 1293.5758 0.57584686 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2 PA2G4 Proliferation-associated protein 2G4 yes no 0 1 0 1.5 0.5 1 1 44.07 44.111 3 1.9161E-06 11894 20230619_1880_Aki_TMTPro18x_K_F1 150.09 136.19 432410 322920 414130 472400 467320 550390 505260 531150 641130 480650 535480 563790 613300 555800 487580 560460 623100 602250 399480 296930 423440 465580 482730 549890 511390 542540 640760 491400 557840 568360 617890 573690 505870 565340 594730 571650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 596990000 24278 654 22792 45575;45576 36698;36699 36698 400 2 9606 Homo sapiens -0.059198030955030845 SEMEVQDAELK Unmodified 1277.5809 0.58093224 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 1.5 0.5 1 1 48.39 48.425 3 2.1711E-09 13718 20230619_1880_Aki_TMTPro18x_K_F1 185.99 161.2 628080 382160 502700 544990 538220 604740 601240 614910 736620 689950 650120 627590 812160 658210 573750 787570 739130 727600 578880 351620 521890 537670 558530 607020 606710 629340 739540 691590 677770 641270 812370 684950 597910 785390 705510 691760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1251200000 24279 654 22792 45577;45578 36700;36701 36700 2 9606 Homo sapiens -0.04675499232871516 SEMTPEELQK Oxidation (M) 1206.5438 0.54381845 3719 P62316;K7ERG4 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 0 1 0 2.2 0.748 1 2 2 41.667 41.722 2;3 2.1546E-07 10324 20230619_1882_Aki_TMTPro18x_K_F3 179.81 143.86 164700 118580 150010 169630 175770 190390 177530 176950 208300 184090 218780 231420 222010 189420 189490 220300 245060 245730 152060 109030 154110 167310 180630 190600 179860 181930 210790 187150 224170 231360 224990 198410 196500 222220 233940 233120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 618050000 24280 3719 22793 45579;45580;45581;45582;45583 36702;36703 36703 2402 2 9606 Homo sapiens -0.05119170778630178 SEMTPEELQK Unmodified 1190.5489 0.54890383 3719 P62316;K7ERG4 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes no 0 0 0 3 0.816 2 2 2 46.484 46.551 2;3 1.7921E-07 12399 20230619_1883_Aki_TMTPro18x_K_F4 146.68 110.74 733370 521870 639260 689770 670850 550450 720510 676510 653470 837050 930430 955640 988960 835010 814610 979250 998650 888570 676860 479420 657730 681090 694050 570640 721830 687100 681310 840380 944240 960710 999150 872700 842430 976310 952960 845330 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1047799999.9999999 24281 3719 22793 45584;45585;45586;45587;45588;45589 36704;36705;36706;36707;36708 36708 5 9606 Homo sapiens -0.03874866916021347 SENEEFVEVGR Unmodified 1293.5837 0.58370943 2223 P10644;B2R5T5;Q68DQ4;K7EM13;P10644-2 PRKAR1A;DKFZp779L0468 cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 0 0 0 1 0 1 43.978 43.978 2 5.6591E-06 11849 20230619_1880_Aki_TMTPro18x_K_F1 157.24 126.99 99852 80663 91536 100120 94391 105790 116990 115820 141970 119380 149400 158270 152060 131750 139390 132610 152040 156720 92259 74015 93789 99602 98483 106770 117400 117750 143380 121670 153110 157980 154520 136810 142620 134640 145380 148580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151880000 24282 2223 22794 45590 36709 36709 1 9606 Homo sapiens -0.05133907783738323 SENFEELLK Unmodified 1107.5448 0.54480473 3522 P29373;Q5SYZ4 CRABP2 Cellular retinoic acid-binding protein 2 yes no 0 0 0 3.5 0.5 1 1 58.509 58.526 2 6.862E-06 17826 20230619_1882_Aki_TMTPro18x_K_F3 204.86 111.3 133220 112680 148860 115800 112450 153760 197610 193250 261640 384740 277620 335030 483720 308780 326810 608320 352060 473890 123330 103200 149270 117390 122230 153500 196250 199600 264400 376840 293370 341700 479010 335540 338100 597980 337450 451080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 212230000 24283 3522 22795 45591;45592 36710;36711 36710 2 9606 Homo sapiens -0.00466588347421748 SENNSSNSDIVHVEK Unmodified 1657.7544 0.75435658 4463 Q9BXK5;A0A087WTL4;A0A087WX97;B7Z737;A8K5Y4;B7Z238;B2RB43;Q9BXK5-4 BCL2L13 Bcl-2-like protein 13 yes no 0 0 0 2 0 2 39.003 39.069 3 8.2518E-06 9363 20230619_1881_Aki_TMTPro18x_K_F2 115.8 103.82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24284 4463 22796 45593;45594 36712;36713 36712 2 9606 Homo sapiens -0.04821041922923541 SENPGEISLR Unmodified 1100.5462 0.54620171 4392 Q96RF0-2;Q96RF0-3;Q96RF0 SNX18 Sorting nexin-18 yes no 0 0 0 2.5 0.5 1 1 41.516 41.586 2 2.7508E-05 10288 20230619_1882_Aki_TMTPro18x_K_F3 166.34 128.61 196500 175760 193650 226360 129360 123040 181950 182260 180770 181460 259520 236190 209690 196940 205060 210640 257170 234210 181780 161270 196140 223130 140660 133700 180550 182300 187130 184990 260220 236100 215500 205070 211500 212780 245400 222290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142440000 24285 4392 22797 45595;45596 36714;36715 36715 2 9606 Homo sapiens -4.9542586793904775E-05 SENQEFYQDTFGQQWK Unmodified 2033.8755 0.87553435 2265 B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 5 0.816 1 1 1 59.352 59.392 3 1.9714999999999997E-19 17861 20230619_1886_Aki_TMTPro18x_K_F6 206.52 196.33 189130 164670 184160 185120 163970 178860 194350 207910 192560 255240 227910 217590 291270 223300 215680 272750 243100 233520 174920 150910 187180 185310 172680 182070 194280 211580 198070 254130 234830 222850 291490 232870 222470 270960 232260 222250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 377280000 24286 2265 22798 45597;45598;45599 36716;36717 36717 2 9606 Homo sapiens -0.10004839280259148 SEPAAEEGALVPPEPIPGTAQPVK Unmodified 2383.2271 0.22710599 4476 Q9BZE9;Q9BZE9-2;Q9BZE9-3;J3KRF7 ASPSCR1 Tether containing UBX domain for GLUT4 yes no 0 0 0 3.5 0.5 2 2 57.405 57.423 3;4 2.2137E-05 17397 20230619_1882_Aki_TMTPro18x_K_F3 85.945 76.157 39287 28054 34499 38037 28477 36180 41633 36092 44529 40737 40909 38346 41935 36097 42457 44002 43029 43121 36262 25778 35385 37562 30454 36707 41291 37026 45039 40861 42181 38975 42796 37729 43204 44039 41165 40966 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 50716000 24287 4476 22799 45600;45601;45602;45603 36718;36719 36718 2 9606 Homo sapiens 0.09082151904567581 SEPEDPVTER Unmodified 1157.52 0.52004654 1734 Q9BT22;A0A804HJL6;A0A804HKX7;A0A804HKK4;Q9BT22-2;A0A804HLB7;A0A804HJQ1;A0A804HIG6;A0A804HKU4;K7EID2;A0A804HKJ4 ALG1 Chitobiosyldiphosphodolichol beta-mannosyltransferase yes no 0 0 0 1 0 1 35.716 35.716 2 8.1095E-07 8255 20230619_1880_Aki_TMTPro18x_K_F1 196.99 107.7 27833 20953 24879 26598 36182 41131 38822 35068 46156 37583 41642 46951 40988 32866 41726 35634 50336 46812 25701 19236 25709 26580 36781 40341 39186 36310 46397 38148 42951 46726 41886 34533 42854 36410 48054 44356 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114580000 24288 1734 22800 45604 36720 36720 1 9606 Homo sapiens -0.05241268220811435 SEPIPESNDGPVK Unmodified 1367.6569 0.65687437 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DJ98;B4DDM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 2.25 0.829 1 1 2 44.049 44.099 2;3 2.8484E-12 11423 20230619_1882_Aki_TMTPro18x_K_F3 190.36 157.09 565160 463840 547510 498070 579490 692240 632700 626940 748170 643370 740090 740210 811200 717950 709610 894020 877740 801760 522460 425010 557930 503050 601390 683750 638450 645270 754990 652640 762780 746880 821230 750260 733630 889920 837670 762780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2277100000 24289 2389 22801 45605;45606;45607;45608 36721;36722;36723 36723 3 9606 Homo sapiens -0.01224779061112713 SEPPPLDR Unmodified 909.4556 0.45559579 4474 S4R369;Q9BZE1 MRPL37 39S ribosomal protein L37, mitochondrial yes no 0 0 0 2 0 1 35.984 36.041 2 0.007866 8083 20230619_1881_Aki_TMTPro18x_K_F2 106.36 68.711 47178 28823 44184 53469 68684 75417 57798 62658 78330 58290 77601 78655 76382 69917 57665 53082 89031 78998 43532 26612 45559 52192 69153 74255 59536 64757 78530 59818 79571 78598 77165 71524 60662 55092 84811 74795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23068000 24290 4474 22802 45609 36724 36724 1 9606 Homo sapiens -0.0027537851627812415 SEPQNLGGAAGR Unmodified 1155.5632 0.56324876 642 A0A024RB09;P61020-2;P61020;Q6FI54 RAB5B Ras-related protein Rab-5B yes no 0 0 0 3.5 0.5 1 1 33.823 33.883 2 3.4196E-11 7057 20230619_1883_Aki_TMTPro18x_K_F4 194.12 165.9 51333 26709 51656 64587 85226 79211 68598 71979 79654 57351 81499 87434 77967 75980 73360 38706 96171 94141 47361 24794 53014 62205 85313 78781 70466 73648 80512 59703 83417 86923 79547 76809 75733 42721 91781 88836 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60948000 24291 642 22803 45610;45611 36725;36726 36726 2 9606 Homo sapiens -0.008310336528666085 SEPSAGIPK Unmodified 884.46035 0.46034682 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DQN8;B4DM27 PRRC2C Protein PRRC2C yes no 0 0 0 5 0 1 41.099 41.187 2 0.001843 10012 20230619_1885_Aki_TMTPro18x_K_F5 133.33 101.22 43178 32694 50441 53517 60788 67873 55564 58009 67643 52818 60708 60718 73651 57156 59645 51507 77509 67088 39963 30104 50811 52483 62185 67281 56709 59797 67923 53940 63169 61154 74072 58827 61826 52757 73916 63593 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27880000 24292 2894 22804 45612 36727 36727 1 9606 Homo sapiens 0.013495056264900995 SEPVKEESSELEQPFAQDTSSVGPDRK Unmodified 2975.3996 0.39960364 2020;3876 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;Q14151;A0PJ47 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 no no 0 0 2 5 0 1 49.504 49.58 4 7.7789E-10 13590 20230619_1885_Aki_TMTPro18x_K_F5 120.27 110.48 27974 24134 25160 25820 22411 25124 27104 27089 24657 31735 30535 25510 27558 21150 25954 27848 23693 21143 25854 22108 25755 25945 23621 25515 26996 27660 25522 31612 30890 26040 28119 22321 26306 27502 22673 20162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21548000 24293 2020;3876 22805 45613 36728 36728 1 9606 Homo sapiens -0.009080180072942312 SEPVVSTR Unmodified 873.4556 0.45559579 1252 A0A140VKG4;Q9NRY5;E5RK42;E5RHP2;E5RHI8;E5RFK2;E5RGF9;I6L9D5;B4E1J2;E5RH43 FAM114A2 Protein FAM114A2 yes no 0 0 0 3 0 1 32.448 32.519 2 0.0093449 6591 20230619_1882_Aki_TMTPro18x_K_F3 102 68.644 18493 11829 25241 23371 31327 36276 26277 27608 28046 17787 30696 34149 21629 25537 29226 15025 34309 34158 17128 10930 25161 22799 31917 35473 26856 28540 28521 19018 31010 33610 22777 26055 29785 16387 32776 32242 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9119200 24294 1252 22806 45614 36729 36729 1 9606 Homo sapiens 0.013806214837131847 SEQAVAQLEEEK Unmodified 1359.6518 0.65178899 4492;740 A0A024RCZ8;Q9NSK0;Q9NSK0-3;C9J8T5;Q9NSK0-4;C9JZE5;Q9H0B6;A8MX29;E9PP09;C9JHT2;E9PM83 KLC4;KLC2 Kinesin light chain 4;Kinesin light chain 2 no no 0 0 0 2 0 1 49.821 49.879 3 0.00034906 14365 20230619_1881_Aki_TMTPro18x_K_F2 78.401 63.502 96724 80444 98433 99544 96350 107670 105530 107410 119600 114800 127630 128590 136130 113030 124600 141290 134550 134280 89460 73803 99826 99084 100500 108260 106350 109950 121360 116050 130950 129440 138100 118590 127540 141100 128640 127610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152620000 24295 740;4492 22807 45615 36730 36730 1 9606 Homo sapiens -0.013650829237349171 SEQDQAENEGEDSAVLMER Oxidation (M) 2151.8862 0.88623497 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 1 0 1 0 1 41.401 41.401 3 2.1376E-07 10739 20230619_1880_Aki_TMTPro18x_K_F1 106.92 86.662 17685 15147 15208 18812 21340 22634 21355 17885 21225 27697 23530 23134 23287 19371 18145 21427 26447 25281 16338 13896 15770 18737 21674 22494 21516 18867 21764 27319 24015 23542 23534 20230 19017 21705 25216 23976 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215940000 24296 12 22808 45616 36731 36731 6 1 9606 Homo sapiens -0.14363269478735674 SEQDQAENEGEDSAVLMER Unmodified 2135.8913 0.89132035 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 1 0 1 45.577 45.577 3 1.3589000000000001E-31 12523 20230619_1880_Aki_TMTPro18x_K_F1 236.68 229.8 33579 21160 25684 34597 26532 36100 33742 35853 28480 38603 41203 35176 41797 33899 34495 50167 51693 41521 30944 19499 26825 33823 27740 36346 33457 36712 29853 38736 41658 35877 42297 35869 36238 49619 49223 39566 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 350210000 24297 12 22808 45617 36732 36732 1 9606 Homo sapiens -0.1311896561614958 SEQEDEVLLVSSSR Unmodified 1576.758 0.75804498 665 A0A024RBD0;B2RE29;A0A024RBG1;Q9NZJ9;Q9NZJ9-2 NUDT4 Diphosphoinositol polyphosphate phosphohydrolase 2 yes no 0 0 0 1 0 1 49.724 49.724 3 8.129600000000001E-29 14235 20230619_1880_Aki_TMTPro18x_K_F1 249.39 226.01 19947 16681 22235 19817 19419 21431 24072 20048 23013 23228 23804 24354 24446 21685 26135 23373 19664 21697 18464 15298 22341 19786 20502 21521 23968 20675 23539 23341 24428 24576 25005 22538 26175 23382 18891 20618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205290000 24298 665 22809 45618 36733 36733 1 9606 Homo sapiens -0.007263721490517128 SEQEPGGGLGR Unmodified 1085.5102 0.51015055 309 Q5CZ83;B4DZC2;Q9Y4Q3;B4DZ41;B7Z926;A0A024R4W4;Q86X06;A0A024R4V5;O95696;O95696-2 DKFZp686F0325;DKFZp434B094;BRD1 Bromodomain-containing protein 1 yes no 0 0 0 1.5 0.5 1 1 33.089 33.119 2 7.4094E-05 6928 20230619_1881_Aki_TMTPro18x_K_F2 140.17 111.08 14836 8895 14060 17526 19069 21018 16801 19675 24610 15551 22166 22300 20677 18962 18859 12863 25084 23819 13690 8221 14443 17015 19367 20940 17316 20078 24493 16160 22788 22210 21079 19355 19517 13659 23931 22512 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14576000 24299 309 22810 45619;45620 36734 36734 1 9606 Homo sapiens -0.029184114354848134 SEQFINLR Unmodified 1005.5243 0.52434406 326 A0A024R5A3;A0A024R580;B2RDI5;P07384;B4DWH5 CAPN1 Calpain-1 catalytic subunit yes no 0 0 0 6.5 0.5 1 1 47.687 47.771 2 0.020806 12557 20230619_1887_Aki_TMTPro18x_K_F7 88.294 55.684 370390 274540 380980 370390 438520 465370 450850 403430 499520 438750 477070 497500 508810 423540 474540 414080 582390 523970 342370 252220 386940 367370 451090 461940 455270 417490 505130 443500 492110 499640 516700 439030 488700 422650 555780 496720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182790000 24300 326 22811 45621;45622 36735 36735 1 9606 Homo sapiens 0.021802857834131828 SEQLEELFSQVGPVK Unmodified 1688.8621 0.86211612 430 A0A024R753;Q9NW13;Q9NW13-2;A0A0S2Z5E5;C9JE21;C9JAA9 RBM28 RNA-binding protein 28 yes no 0 0 0 6.5 0.5 1 1 63.318 63.358 3 3.9053E-08 19365 20230619_1887_Aki_TMTPro18x_K_F7 139.7 135.31 57311 47085 62065 61607 59522 76579 63086 70594 67922 73768 78996 66137 75786 69906 76293 89767 75603 81691 53032 43225 62622 61217 62195 76123 63605 72577 69389 74149 80313 67710 77503 73009 77614 89397 72386 77654 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 550060000 24301 430 22812 45623;45624 36736 36736 1 9606 Homo sapiens 0.045239546784159756 SEQQDNPHFR Unmodified 1256.5534 0.55341235 2748 F8WDA3;C9JCY7;F8WDH5;Q69YS0;Q8TEM7;Q86TA5;Q96N46-3;Q96N46-2;Q96N46 TTC14;DKFZp313K2110;FLJ00166;DKFZp451L0319 Tetratricopeptide repeat protein 14 yes no 0 0 0 2 0 1 28.452 28.527 3 1.0175E-05 5194 20230619_1881_Aki_TMTPro18x_K_F2 152.17 133.43 6411.8 4616.9 4826.1 7625.6 8927.4 9763.8 6465.1 8585.9 11524 6516.9 9390.9 9122.5 6876 8339.5 8624.8 7986.9 8987.7 9525.2 5912.3 4252.4 5112.1 7471.2 8896.9 9678.2 6817.4 8792.2 11347 6787.9 9623.9 9121.3 7199.3 8598.2 8756.5 8121.2 8599.6 9028.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6529500 24302 2748 22813 45625 36737 36737 1 9606 Homo sapiens -0.06460221658244336 SEQSVAQLEEEK Unmodified 1375.6467 0.64670362 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5;G3V2P7 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 0 1 0 1 47.377 47.377 3 0.023124 13316 20230619_1880_Aki_TMTPro18x_K_F1 57.425 40.058 32288 33973 38318 42314 46800 54451 44235 43859 51697 47939 55589 65715 54345 52381 53667 53386 67390 60958 29955 31146 38580 42191 47885 53889 44985 45656 52390 48783 56871 65411 55528 54492 55335 54066 64301 57841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118510000 24303 3808 22814 45626 36738 36738 1 9606 Homo sapiens -0.02609386786343748 SEQSVAQLEEEKK Unmodified 1503.7417 0.74166663 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5;G3V2P7 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 1 4 0 1 45.515 45.559 3 4.9612E-06 11993 20230619_1883_Aki_TMTPro18x_K_F4 128.96 108.76 75411 69080 73588 82924 81027 81932 79321 87710 102000 96204 119130 115750 118590 83495 86688 110980 113630 102000 69769 63336 75058 82605 83509 83090 80823 89426 103280 97344 121310 115560 119420 88689 90329 110520 108380 97014 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65680000 24304 3808 22815 45627 36739 36739 1 9606 Homo sapiens 0.009945466848421347 SEREEVSSWR Unmodified 1263.5844 0.58437813 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 2.5 0.5 1 1 34.379 34.438 3 1.9537E-07 7434 20230619_1881_Aki_TMTPro18x_K_F2 186.87 131.89 177350 160000 192060 167680 192040 226730 216360 219920 238270 215940 211920 207470 245170 182890 217980 205530 240190 197020 164210 146520 193770 169630 200200 224650 217450 224940 240460 218220 220110 210160 247720 190780 223260 205780 229300 187380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 303860000 24305 3152 22816 45628;45629 36740;36741 36740 2 9606 Homo sapiens -0.03687068343992905 SESEEEVLLVSSSR Unmodified 1549.7471 0.74714594 3366 O95989 NUDT3 Diphosphoinositol polyphosphate phosphohydrolase 1 yes yes 0 0 0 1 0 1 50.729 50.729 2 4.3807E-60 14653 20230619_1880_Aki_TMTPro18x_K_F1 281.99 251.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24306 3366 22817 45630 36742 36742 1 9606 Homo sapiens -0.005737745233318492 SESGYGFNVR Unmodified 1114.5043 0.5043369 4378 Q96L92-3;Q96L92;A0A2R8Y8A7;A0A2R8Y871;A0A2R8YD75;H7C603 SNX27 Sorting nexin-27 yes no 0 0 0 6 0 1 42.688 42.782 2 5.2754E-10 10691 20230619_1886_Aki_TMTPro18x_K_F6 214.23 205.89 109000 85687 103370 107110 106700 118380 119130 119610 134470 140580 156690 151040 157540 140420 145860 166750 182620 166940 100720 78638 105560 106570 110930 118880 119900 122660 137020 141260 159710 152570 160280 146550 150660 167100 174270 158620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67406000 24307 4378 22818 45631 36743 36743 1 9606 Homo sapiens -0.04833509947184211 SESLSDNATAFSNR Unmodified 1497.6696 0.66956432 3300 Q6IAZ3;O75379-2;O75379 VAMP4 Vesicle-associated membrane protein 4 yes no 0 0 0 4 0 1 43.21 43.254 3 0.012283 10980 20230619_1883_Aki_TMTPro18x_K_F4 63.85 56.252 36241 27590 38054 40576 48474 53681 45000 52448 55875 38272 52973 50839 40098 43059 45296 40071 51046 48437 33511 25369 38679 40067 49444 53235 45925 53260 56105 39846 53914 50794 41648 44476 46256 40809 48767 45926 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23947000 24308 3300 22819 45632 36744 36744 1 9606 Homo sapiens -0.059363676688462874 SESLVVCDVAEDLVEK Acetyl (Protein N-term) 1832.8714 0.87136018 3685 P60983;G3V4P8;G3V3X4 GMFB Glia maturation factor beta yes no 1 0 0 1.5 0.5 2 2 65.983 65.987 2;3 2.9708999999999996E-21 20908 20230619_1880_Aki_TMTPro18x_K_F1 122.7 111.53 41840 36620 34680 41812 34278 42094 39665 41493 40610 46152 47018 43191 48839 41780 40443 54939 41116 51745 38650 33564 35866 41805 35828 42530 39727 42554 41601 46292 47987 43968 49383 43839 41397 54773 39407 49142 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 234920000 24309 3685 22820 45633;45634;45635;45636 36745;36746 36745 2 9606 Homo sapiens -0.011760648181734723 SESPKEPEQLR Unmodified 1298.6466 0.64664404 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;A0A024RC46;A0A7I2V2L6;B4E0B5;B4DP35;F8VTQ5;F8W646;A0A7I2YQ85 HNRNPA1;HNRPA1;hCG_2020860 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 1 3 0.816 1 1 1 35.964 36.018 3 0.0012383 7912 20230619_1883_Aki_TMTPro18x_K_F4 91.694 77.655 406430 305760 359200 416480 475800 507720 484560 450990 555380 513000 574270 485970 549980 415610 564930 415860 411490 317830 375270 280910 370940 412500 485250 505140 490080 466330 562390 514450 586740 492230 562140 431140 564870 413080 394540 303260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8333999999.999999 24310 640 22821 45637;45638;45639 36747;36748 36748 2 9606 Homo sapiens 0.009266580043231443 SESPKEPEQLRK Unmodified 1426.7416 0.74160705 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;A0A024RC46;A0A7I2V2L6;B4E0B5;B4DP35;F8VTQ5;F8W646;A0A7I2YQ85 HNRNPA1;HNRPA1;hCG_2020860 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 2 4.5 0.5 1 1 36.845 36.914 4 0.082906 8340 20230619_1885_Aki_TMTPro18x_K_F5 45.853 31.947 53010 51773 48059 48447 61183 53165 52521 52519 64309 59206 63761 44987 58271 41641 49115 54251 45909 35916 49039 47356 49407 49308 62197 53468 53830 53865 64824 59058 65059 46266 59142 43751 49955 53286 43887 34344 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2079399999.9999998 24311 640 22822 45640;45641 36749 36749 1 9606 Homo sapiens 0.04530591475509027 SESPSLTQER Unmodified 1132.536 0.53603095 1630 H7BZJ7;A0A6Q8PFY3;Q9BXW9-3;Q9BXW9;Q9BXW9-1 FANCD2 Fanconi anemia group D2 protein yes no 0 0 0 2 0 1 34.082 34.139 2 1.9759E-07 7325 20230619_1881_Aki_TMTPro18x_K_F2 191.45 157.6 28667 19491 21817 26082 40083 50007 25380 21206 30150 31915 36515 32953 38820 30514 22266 30345 39770 32394 26427 17911 23033 26068 39871 48072 26583 23944 30730 31747 37213 33322 38754 31563 23938 30592 37832 30773 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13202000 24312 1630 22823 45642 36750 36750 1 9606 Homo sapiens -0.024935619838970524 SESSTSAFSTPTR Unmodified 1356.6157 0.61573784 1847 A0A8V8TPV5;A0A8V8TQZ3;Q8WWQ0;A0A8V8TQM4;A0A8V8TPK0;Q9NWP3 PHIP PH-interacting protein yes no 0 0 0 4.5 0.5 1 1 37.418 37.51 2 2.2314E-18 8531 20230619_1883_Aki_TMTPro18x_K_F4 191.52 165.89 27811 21809 28062 31158 26379 32321 30730 26976 31043 36904 40337 39608 42402 32419 32769 47064 44794 36950 25711 20045 28484 30697 27668 32460 30749 28213 31999 36839 41023 39862 42735 34450 34231 46453 42688 35231 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42860000 24313 1847 22824 45643;45644 36751;36752 36751 2 9606 Homo sapiens -0.04830540100579128 SESTSGATQFMPDPK Oxidation (M) 1597.693 0.69300188 4136 Q6UXV4;Q68DW4 APOOL;DKFZp779P1227 MICOS complex subunit MIC27 yes no 0 1 0 4 0 1 43.48 43.525 3 0.0035218 11058 20230619_1883_Aki_TMTPro18x_K_F4 63.037 51.245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24314 4136 22825 45645 36753 36753 2673 1 9606 Homo sapiens -0.08193689946551785 SESVVYADIR Unmodified 1137.5666 0.5666028 2072 Q9UEL4;Q5U0H8;A8K5D4;O95297-4;O95297-2;O95297;O95297-5 MPZL1 Myelin protein zero-like protein 1 yes no 0 0 0 3 0 1 45.528 45.604 2 0.00076962 12128 20230619_1882_Aki_TMTPro18x_K_F3 135.71 102.16 125060 98414 118680 128550 111680 145520 125370 124840 139300 161210 166390 169580 178470 152030 158430 185450 189440 188770 115570 90359 121070 127530 117120 145330 126110 129950 142310 161210 169980 171190 180830 159170 163310 185930 180950 179260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61604000 24315 2072 22826 45646 36754 36754 1 9606 Homo sapiens 0.0033221640114788897 SETAPAAPAAAPPAEK Acetyl (Protein N-term) 1519.7518 0.75183739 3463 P16403 HIST1H1C Histone H1.2 yes yes 1 0 0 3.17 1.34 1 1 1 2 1 44.755 44.804 2 8.2542E-11 11711 20230619_1882_Aki_TMTPro18x_K_F3 104.87 9.8479 129330 102240 112680 125140 119000 114100 115160 122830 132880 134780 146940 156280 150440 126460 136190 152150 169690 157920 119440 93811 115980 124370 122930 116490 116960 125220 134960 136190 150310 156650 152770 132780 140660 152770 161950 149980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4521200000 24316 3463 22827 45647;45648;45649;45650;45651;45652 36755;36756;36757;36758;36759 36757 5 9606 Homo sapiens 0.01275154410086543 SETAPAAPAAPAPAEK Unmodified 1477.7413 0.7412727 1927 Q4VB24;A3R0T8;P10412;A3R0T7;B2R984 HIST1H1E Histone H1.4 yes no 0 0 0 4 0 1 41.662 41.705 3 4.0722E-06 10262 20230619_1883_Aki_TMTPro18x_K_F4 113.94 4.0258 82719 63761 75948 84675 117390 97588 106750 94130 117630 80216 90345 72652 92715 74562 81801 76423 78174 68560 76408 58557 78361 83945 118130 97693 108510 96060 118030 81675 93962 74238 93997 76966 83138 76367 74765 65237 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 337140000 24317 1927 22828 45653 36760 36760 1 9606 Homo sapiens 0.021511717556450094 SETAPAETATPAPVEK Acetyl (Protein N-term) 1639.7941 0.79409613 3461 P16401;Q14463 HIST1H1B Histone H1.5 yes no 1 0 0 1.8 0.748 2 2 1 46.742 46.789 2;3 3.356E-14 12919 20230619_1881_Aki_TMTPro18x_K_F2 105.46 80.606 320440 264410 317090 270940 417560 396530 391900 384410 440830 315670 382190 416670 429090 390120 416590 421690 474690 555460 296290 242170 323570 275010 424600 391420 398060 391620 443640 326050 397260 417650 436120 405020 427080 430690 454180 525860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12168000000 24318 3461 22829 45654;45655;45656;45657;45658 36761;36762 36762 2 9606 Homo sapiens -0.00020914972196806048 SETAPAETATPAPVEK Unmodified 1597.7835 0.78353145 3461 P16401;Q14463 HIST1H1B Histone H1.5 yes no 0 0 0 3 0.816 1 1 1 42.876 42.94 3 4.4043E-12 10796 20230619_1883_Aki_TMTPro18x_K_F4 147.35 125.15 167700 127790 148580 168200 285430 264210 237180 255260 309860 175810 216540 205220 214170 204680 195730 203030 233320 233830 154850 117360 154670 167760 284110 259730 244020 259100 307420 183110 226360 207140 218020 210990 201470 205780 222880 221760 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 683090000 24319 3461 22829 45659;45660;45661 36763;36764;36765 36765 3 9606 Homo sapiens 0.008551023733616603 SETAPLAPTIPAPAEK Acetyl (Protein N-term) 1633.8563 0.85630246 3462 P16402 HIST1H1D Histone H1.3 yes yes 1 0 0 3.4 1.02 1 2 1 1 59.026 59.052 2;3 9.7763E-08 17980 20230619_1882_Aki_TMTPro18x_K_F3 83.182 67.292 427240 301930 458830 423450 337160 396060 504270 499870 526110 434410 421070 459670 527790 448410 475340 483850 505790 574120 394960 277560 461520 417470 364310 404760 499490 501780 530310 443360 442000 465110 532850 464970 486010 490690 484110 544100 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 2792800000 24320 3462 22830 45662;45663;45664;45665;45666 36766;36767;36768;36769;36770 36768 5 9606 Homo sapiens 0.06472856166828933 SETDLLDIR Unmodified 1060.5401 0.5400537 4024 Q6ICS0;Q59EP1;B4DPJ2;Q5T0G8;P50995-2;P50995;B7Z6L0;H0Y6E1 ANXA11 Annexin;Annexin A11 yes no 0 0 0 2 0.816 1 1 1 52.413 52.446 2 0.00044081 15528 20230619_1881_Aki_TMTPro18x_K_F2 160.69 99.981 409230 351080 374160 403690 374730 422700 517540 502590 539390 539540 438070 438200 608490 417700 446230 608380 478640 519570 378250 321830 383310 403800 393060 427860 514020 508800 544620 540120 461620 448940 607270 442080 459310 602810 457930 494280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 569090000 24321 4024 22831 45667;45668;45669 36771 36771 1 9606 Homo sapiens 0.012205275098040147 SETDTSLIR Unmodified 1020.5088 0.50875357 765;2549 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2;B4DN39 CCT6A T-complex protein 1 subunit zeta no no 0 0 0 2.5 0.5 1 1 39.529 39.591 2 1.8716E-17 9440 20230619_1882_Aki_TMTPro18x_K_F3 258.25 118.94 606270 446150 477730 528220 607980 663720 568890 588380 938870 676690 751030 983210 1089500 938940 568800 1306700 1344300 1378200 559260 409330 498210 528460 621200 659220 587050 608680 927550 689340 794960 983190 1077600 989280 634400 1308700 1278900 1308100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1834999999.9999998 24322 765;2549 22832 45670;45671 36772;36773 36773 2 9606 Homo sapiens -0.0006804552425592192 SETILSPPPEK Unmodified 1196.6289 0.62886871 55 Q9P0M6;A0A024QZP6;A0A7I2V423;A0A7I2V412;Q9HA11;A0A7I2YQD6;A0A7I2YQR8;A0A7I2V6E9;A0A7I2V2N7;A0A7I2V522;A0A7I2V3Z8;A0A7I2V3M7 H2AFY2 Core histone macro-H2A.2;Core histone macro-H2A;Histone H2A yes no 0 0 0 4.5 0.5 1 1 48.655 48.712 3 0.025209 13303 20230619_1883_Aki_TMTPro18x_K_F4 57.225 23.359 63851 46338 51194 63804 54931 69893 69821 65040 94005 73043 80540 81440 94117 79999 76350 98514 102720 97681 58903 42584 53211 63046 57305 70064 70238 67016 93786 73715 83848 82296 94819 83544 79523 98586 97988 92805 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84328000 24323 55 22833 45672;45673 36774 36774 1 9606 Homo sapiens 0.038419427494545744 SETISVPQEIK Unmodified 1229.6503 0.65033243 2930 E9PKT9;O96033 MOCS2 Molybdopterin synthase sulfur carrier subunit yes no 0 0 0 5 0 1 50.411 50.487 3 0.0011724 13969 20230619_1885_Aki_TMTPro18x_K_F5 89.171 60.994 59164 51382 56976 55564 61723 58627 70370 68148 69888 73453 75307 62412 73672 54685 77970 70935 64001 69455 54711 47073 58119 55857 63877 59316 70439 69091 71464 73588 76876 63645 75365 57574 78403 70964 61408 65964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25558000 24324 2930 22834 45674 36775 36775 1 9606 Homo sapiens 0.044693277782016594 SETITEEELVGLMNK Oxidation (M) 1707.8237 0.8236817 1468 A0A384NL53;P16152 CBR1 Carbonyl reductase [NADPH] 1 yes no 0 1 0 3.5 0.5 1 1 58.463 58.48 3 4.831E-14 17804 20230619_1882_Aki_TMTPro18x_K_F3 173.19 153.61 24961 17177 20839 25814 23406 28141 27061 23537 29851 26660 25815 25015 28139 20956 26228 25482 24461 28849 23026 15805 21586 25369 24236 28159 27145 24462 30089 26738 26775 25329 28531 22013 26604 25724 23452 27349 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84308000 24325 1468 22835 45675;45676 36776 36776 970 1 9606 Homo sapiens -0.001917190183803541 SETITEEELVGLMNK Unmodified 1691.8288 0.82876708 1468 A0A384NL53;P16152 CBR1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 5 0 1 62.942 62.989 3 7.1807E-14 19286 20230619_1885_Aki_TMTPro18x_K_F5 170.18 142.77 89638 60352 77880 85279 70437 107670 93520 88165 103060 87595 94156 104090 118400 87754 107240 123480 99552 111620 82705 55497 80070 84322 74640 106620 93237 91424 104050 89102 98169 104410 119450 92974 108910 122800 95408 106100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274470000 24326 1468 22835 45677 36777 36777 1 9606 Homo sapiens 0.010525848442284769 SETSGPQIK Unmodified 945.47673 0.47672516 4703 Q9Y266;Q9H2R7;A0A0A0MSU9;A0A0A0MSS4 NUDC;NPD011 Nuclear migration protein nudC yes no 0 0 0 4.5 0.5 1 1 38.51 38.578 2 1.6327E-08 8936 20230619_1885_Aki_TMTPro18x_K_F5 212.2 128.1 171860 86759 202400 221700 282410 369790 213190 278730 236560 192850 296520 359990 263470 268900 281860 124430 329350 324910 158770 80641 204430 214350 285560 360100 219960 288550 241850 204630 300450 354300 271110 272720 288000 139150 314630 306490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 128120000 24327 4703 22836 45678;45679 36778;36779 36779 2 9606 Homo sapiens 0.0018058679256682808 SETSWESPK Unmodified 1049.4666 0.46655441 567 A0A024R9D2;Q86UE4;E5RJU9 MTDH Protein LYRIC yes no 0 0 0 3.5 0.5 1 1 43.649 43.706 2 6.3558E-09 11143 20230619_1883_Aki_TMTPro18x_K_F4 245.16 204.89 82862 59666 68574 64706 75710 79593 82493 81754 92353 83677 96942 109770 102430 83580 99423 92590 127290 119160 76454 54704 70930 65176 78268 79433 83092 83416 93679 85251 99588 109320 104230 87595 102640 94407 121470 112930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77522000 24328 567 22837 45680;45681 36780 36780 1 9606 Homo sapiens -0.05620020932656189 SEVAAENHLR Unmodified 1124.5574 0.5574351 3891 Q14554-2;Q14554 PDIA5 Protein disulfide-isomerase A5 yes no 0 0 0 3 0 1 31.215 31.301 3 4.215E-11 6098 20230619_1882_Aki_TMTPro18x_K_F3 143.5 107.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24329 3891 22838 45682 36781 36781 1 9606 Homo sapiens 0.00013867835446035315 SEVATLTAAGK Unmodified 1046.5608 0.56078914 2521;3555 P36542-2;B4DL14;B4DFE6;Q8TAS0;P36542 ATP5C1 ATP synthase subunit gamma, mitochondrial;ATP synthase subunit gamma no no 0 0 0 6.5 0.5 1 1 47.238 47.323 2 3.5254E-07 12323 20230619_1887_Aki_TMTPro18x_K_F7 147.4 79.181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24330 2521;3555 22839 45683;45684 36782;36783 36783 2 9606 Homo sapiens 0.039371178894725745 SEVDMLK Oxidation (M) 836.39497 0.39496937 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;A6NMY6;H0YL33;B4DNH8 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 1 0 3.5 0.5 1 1 42.944 42.999 2 0.019863 10832 20230619_1883_Aki_TMTPro18x_K_F4 97.033 42.977 1228400 894060 1041400 1123700 1722300 1579400 1360900 1324600 1710600 1538000 1912300 2032800 1648500 1548100 1717300 1532800 2132200 1881700 1133600 820820 1083700 1121600 1723900 1557500 1403700 1376400 1730400 1558300 1941900 2023700 1695400 1611500 1766800 1561000 2034400 1784500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1197200000 24331 368 22840 45685;45686 36784;36785 36785 217 2 9606 Homo sapiens -0.02977231890861276 SEVDMLK Unmodified 820.40005 0.40005474 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;A6NMY6;H0YL33;B4DNH8 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 3.8 0.748 2 2 1 48.052 48.115 2;3 0.0030159 13267 20230619_1882_Aki_TMTPro18x_K_F3 157.86 80.115 867820 653010 731000 726690 1013200 1086100 901720 883200 1201000 1022400 1144500 1228700 1217200 1086900 1094600 1155700 1389000 1182700 801000 598730 758120 732660 1027700 1066600 924650 919810 1204000 1032700 1180500 1232900 1234900 1129100 1131700 1161800 1324700 1123800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3697499999.9999995 24332 368 22840 45687;45688;45689;45690;45691 36786;36787;36788 36786 3 9606 Homo sapiens -0.01732928028252445 SEVEALR Unmodified 802.41848 0.418482 4729 Q9Y3P9;Q9Y3P9-2;Q9Y3P9-3;Q9Y3P9-4 RABGAP1 Rab GTPase-activating protein 1 yes no 0 0 0 2 0 1 37.334 37.395 2 0.022633 8647 20230619_1881_Aki_TMTPro18x_K_F2 101.64 15.557 76744 50635 75212 71593 84853 84535 78429 74799 98657 85956 112960 115590 110780 96743 92203 93031 129270 114600 70866 46567 76635 70739 87165 84286 80097 77411 99865 87210 115120 115340 112300 100220 96123 94768 123230 108680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152990000 24333 4729 22841 45692 36789 36789 1 9606 Homo sapiens 0.009369499379431545 SEVELAAALSDK Unmodified 1231.6296 0.62959699 1473 Q03252;A0A384NPH0 LMNB2 Lamin-B2 yes no 0 0 0 5 0 1 58.115 58.171 2 0.0034593 17145 20230619_1885_Aki_TMTPro18x_K_F5 106.62 77.145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24334 1473 22842 45693 36790 36790 1 9606 Homo sapiens 0.023047373985036756 SEVERPASIPLSSGYSTASSDSTPR Unmodified 2580.2304 0.23035346 4484 Q9C0F1;Q9C0F1-2 CEP44 Centrosomal protein of 44 kDa yes no 0 0 1 4.5 0.5 1 1 44.984 45.045 3 3.5716E-75 11637 20230619_1885_Aki_TMTPro18x_K_F5 300.25 279.62 108100 90670 99233 114750 84205 101340 112610 121670 120860 117510 134070 161430 127040 128320 129740 135480 127850 164250 99909 83201 101430 113740 89494 103930 112200 122810 123130 120270 136830 160670 130130 133750 131830 137630 122600 155570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 508510000 24335 4484 22843 45694;45695 36791;36792 36792 2 9606 Homo sapiens 0.0034475022066544625 SEVNLAQR Unmodified 915.47739 0.47739386 3988 Q53F19;L0R6D6 C17orf85 Uncharacterized protein C17orf85 yes no 0 0 0 4 0 1 35.661 35.709 2 0.02508 7822 20230619_1883_Aki_TMTPro18x_K_F4 84.476 46.917 28283 15256 21864 28070 37094 36445 30978 28943 42241 24379 31911 29352 26281 26378 29114 19941 37645 30731 26048 14094 23005 27366 37162 36034 31911 29973 41917 25081 32966 29469 27178 26964 29970 20780 35888 29100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14413000 24336 3988 22844 45696 36793 36793 1 9606 Homo sapiens 0.016274262322895083 SEVPLVDVTK Unmodified 1085.5968 0.5968403 2174 E9PDF6;B0I1S9;O43795-2;O43795;B3KQI2;H7C2Y7 MYO1B Unconventional myosin-Ib yes no 0 0 0 4.5 0.5 1 1 53.263 53.309 2 2.2677E-05 15169 20230619_1885_Aki_TMTPro18x_K_F5 182.39 139.27 214250 182450 197000 220240 212300 244670 242530 232170 259880 253110 247470 243560 286050 225460 238610 293230 259220 253430 198030 167330 201960 219630 220230 245270 243290 238630 263350 254420 256140 247180 288350 236780 244910 291210 247780 241150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 120910000 24337 2174 22845 45697;45698 36794;36795;36796 36796 3 9606 Homo sapiens 0.05746575066314108 SEVQQPVHPK Unmodified 1147.5986 0.59857163 3999 Q53GG0;Q9UHB6;F8VQE1;B4DN52;Q9UHB6-2;Q9UHB6-4;F8VS07;B3KTW2;Q9UHB6-3;Q9UHB6-5;F8VRN8 LIMA1 LIM domain and actin-binding protein 1 yes no 0 0 0 5 0.816 1 1 1 34.024 34.085 3 0.00040737 7175 20230619_1885_Aki_TMTPro18x_K_F5 96.009 70.623 71479 40224 64668 66170 76417 98746 66316 73309 96584 73027 82646 78261 100990 81851 72011 66673 104880 92596 65914 37091 66451 65060 78370 96712 68404 76604 96078 74074 86180 79324 101120 83578 75504 68724 99945 87719 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 93561000 24338 3999 22846 45699;45700;45701 36797;36798;36799 36798 3 9606 Homo sapiens 0.030676288749418745 SEVSSDEDIQFR Unmodified 1410.6263 0.62630252 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5;V9GZL3 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 1 0 1 44.855 44.855 2 3.4902999999999996E-40 12210 20230619_1880_Aki_TMTPro18x_K_F1 300.43 270.69 214690 188710 183810 211660 262850 286670 296090 289030 317790 286700 315050 326920 322500 281130 294000 363500 331010 365110 198370 172930 190720 212890 267670 284270 297130 294960 322310 291120 323790 328630 327640 295800 301900 363830 316590 346640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 469910000 24339 2908 22847 45702 36800 36800 1 9606 Homo sapiens -0.06258557446153645 SEWSDLLSDLQK Unmodified 1419.6882 0.6881745 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;F8VZQ1;F8VX13 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 5 0 1 63.863 63.909 3 3.4632E-08 19701 20230619_1885_Aki_TMTPro18x_K_F5 127.7 99.835 227990 206280 231550 262230 204110 266000 244980 242400 253250 363940 426570 535190 382510 406850 443150 442190 461020 579600 210980 189250 234740 260220 215550 268080 245100 252660 264700 366230 428470 530740 395170 425470 450590 451480 441750 548610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255100000 24340 116 22848 45703 36801 36801 1 9606 Homo sapiens -0.004882060269892463 SEYDRGVNTFSPEGR Unmodified 1712.7754 0.77542638 1160 A0A109NGN6;P28066;Q5U0A0 PSMA5 Proteasome subunit alpha type-5;Proteasome subunit alpha type yes no 0 0 1 3.5 0.5 1 1 40.372 40.421 3 2.0088E-07 9776 20230619_1882_Aki_TMTPro18x_K_F3 122.96 101.4 77942 77454 83964 102960 87958 95768 99015 114940 79655 117170 99180 171520 102760 150580 135840 113640 150970 143260 72213 71070 84973 101770 91244 97814 98676 116150 83235 119820 101600 170590 106790 153760 138250 116580 144250 135780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59804000 24341 1160 22849 45704;45705 36802;36803 36802 2 9606 Homo sapiens -0.0524503182339231 SEYFPTLSSR Unmodified 1185.5666 0.5666028 3627;4667 P51805;A0A804HKL4;Q9UIW2 PLXNA3;PLXNA1 Plexin-A3;Plexin-A1 no no 0 0 0 8 0 1 50.82 50.896 2 0.037873 13899 20230619_1888_Aki_TMTPro18x_K_F8 64.927 34.363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24342 3627;4667 22850 45706 36804 36804 1 9606 Homo sapiens -0.018757835988708393 SEYNDQLTR Unmodified 1124.5098 0.5098162 1220 A0A1B0GV75;A0A1B0GTB8;A0A1B0GWC0;A0A140VK13;A0A1B0GVF3;P23786;Q53G79 CPT2 Carnitine O-palmitoyltransferase 2, mitochondrial yes no 0 0 0 2.5 0.5 1 1 36.157 36.213 2 1.7253E-05 8164 20230619_1881_Aki_TMTPro18x_K_F2 169.09 145 60882 41501 68173 146270 76865 73410 74194 76772 89679 60286 107730 188020 75289 98298 73514 70081 91092 83921 56293 38814 69224 137790 78987 79679 75475 78020 91000 65657 108790 181670 78018 102570 75736 71728 86937 79588 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61946000 24343 1220 22851 45707;45708 36805 36805 1 9606 Homo sapiens -0.047458311554009924 SEYSELDEDESQAPYDPNGKPER Unmodified 2654.1256 0.12561362 3478 Q6FGR6;P19387 POLR2C DNA-directed RNA polymerase II subunit RPB3 yes no 0 0 1 1 0 1 47.504 47.504 3 0.069728 13343 20230619_1880_Aki_TMTPro18x_K_F1 40.381 33.877 1894.6 2369.9 2854.8 4505.1 2953.1 3356.7 3893.9 3951.4 3974.9 3297.3 4155.3 3564.3 4110.8 3355.9 4019.5 5027.9 4755.4 5123.9 1765 2183.3 2832.7 4353.3 3081.7 3491.3 3873.8 3980.9 4047.8 3375.9 4249.6 3606.8 4192.6 3557.9 4135.4 5027.1 4545.4 4864.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7560700 24344 3478 22852 45709 36806 36806 1 9606 Homo sapiens -0.1352841604657442 SFAAVIQALDGEMR Unmodified 1506.7501 0.75006325 3562 Q6IAX1;P37268-5;P37268;E9PNM1;B4DND3;A0A1W2PQ47;E9PJG4 FDFT1 Squalene synthase yes no 0 0 0 7.5 0.5 1 1 65.103 65.126 3 0.001361 20156 20230619_1887_Aki_TMTPro18x_K_F7 74.789 60.631 13589 16299 14303 13102 13198 16007 12612 13799 18092 17802 17022 15367 20120 15647 19065 18055 18847 19436 12607 14884 14446 13552 13801 15930 12929 14350 18088 17710 17640 15724 20375 16272 19387 18185 18039 18444 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99821000 24345 3562 22853 45710;45711 36807 36807 1 9606 Homo sapiens 0.016958221204504298 SFADINLYR Unmodified 1097.5506 0.55055881 3377 Q5U091;P01111 NRAS GTPase NRas yes no 0 0 0 8 0 1 55.023 55.09 2 0.00011562 15777 20230619_1888_Aki_TMTPro18x_K_F8 153.08 107.36 95085 75348 82400 88471 77166 99014 84976 82060 93811 104370 108390 124080 114030 96624 106410 121910 133910 137090 87808 69105 84727 88405 80927 98919 85536 85631 95710 104860 110890 124090 115860 101930 109940 122900 127880 130040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101040000 24346 3377 22854 45712 36808 36808 1 9606 Homo sapiens 0.005685549548843483 SFAESGWR Acetyl (Protein N-term) 980.43519 0.4351947 1753 H7C0H7;A0A8I5KRB3;A0A8I5KQY4;A0A8I5KYK3;A0A8I5KQ30;A0A8I5KU55;H7C192;B3KMZ5;Q8N6S5 ARL6IP6 ADP-ribosylation factor-like protein 6-interacting protein 6 yes no 1 0 0 2 0 1 51.845 51.884 2 0.0017749 15293 20230619_1881_Aki_TMTPro18x_K_F2 94.539 89.684 38797 30545 33065 36405 33591 51916 40369 40168 54206 42773 48594 47059 48458 41822 39784 51345 55666 53370 35822 28019 34115 36477 35188 51010 40729 41910 54165 43258 50090 47424 49074 43816 41547 51521 53091 50678 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21144000 24347 1753 22855 45713 36809 36809 1 9606 Homo sapiens -0.05580549176090699 SFAGAVSPQEEEEFRR Unmodified 1837.8595 0.85949036 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B4DVK5 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 1 3 0.816 1 1 1 45.328 45.395 3 2.1360999999999997E-19 12029 20230619_1882_Aki_TMTPro18x_K_F3 207.31 180.53 297930 285920 345670 274160 447110 543540 389000 385910 513660 452550 368020 404320 405550 280770 359330 464440 413650 422610 276150 261590 348340 281560 455320 525570 399330 406560 510680 452540 386290 408300 410230 303700 369790 461050 395320 401810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1065999999.9999999 24348 2188 22856 45714;45715;45716 36810 36810 1 9606 Homo sapiens -0.025925007264959277 SFAGNLNTYK Unmodified 1113.5455 0.54547343 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;Q8WTZ9;O14943 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 2 0 1 49.919 49.978 2 7.5913E-07 14428 20230619_1881_Aki_TMTPro18x_K_F2 183.22 143.12 133570 105010 106450 127250 139420 184220 155620 149450 205310 45841 40114 43072 41060 35112 85555 57951 55149 44483 123270 96338 111070 127370 143030 181040 157290 152320 199230 52133 49094 43699 44063 37668 84380 57203 52986 42432 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36504000 24349 1831 22857 45717 36811 36811 1 9606 Homo sapiens -0.006757489077244827 SFASLFSD Unmodified 872.3916 0.39159855 4190;3465 Q92777;Q86VA8;B3KSV8;A0A024R2F6;B3KRB3;A0A0A0MR68;Q59EX7;Q17R54;A0A024R1I8;O14994;B4DTE0;A0A1W2PSE9;P17600 SYN2;SYN3;SYN1 Synapsin-2;Synapsin-3;Synapsin-1 no no 0 0 0 5.5 0.5 1 1 64.77 64.814 2 0.068447 20275 20230619_1886_Aki_TMTPro18x_K_F6 68.422 58.672 18934 17802 21938 20887 15710 20878 18398 19507 23792 23586 21761 21300 25183 23263 20790 25081 36670 24615 17547 16317 21937 20848 16912 21078 18577 20131 23862 23557 22565 21795 25419 24022 22110 25138 34849 23428 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51813000 24350 4190;3465 22858 45718;45719 36812 36812 1 9606 Homo sapiens -0.04970158673233982 SFCPGGTDSVSPPPSVITQENLGR Unmodified 2501.1857 0.18565188 4481 Q9C0C9;K7EQ12 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 0 0 0 6.5 0.5 1 1 55.905 55.971 3 1.2231999999999998E-19 16172 20230619_1887_Aki_TMTPro18x_K_F7 157.7 153.54 44582 39471 42933 40865 35601 44898 40016 35564 48215 60372 58796 60307 58922 52578 56741 64756 66679 68159 41232 36145 43628 41230 37739 44896 40364 37656 49134 59676 59844 60944 60052 55133 58330 65044 63712 64696 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97881000 24351 4481 22859 45720;45721 36813;36814 36814 2 9606 Homo sapiens -0.004893521264420997 SFCSMAGPNLIAIGSSESAQK Oxidation (M) 2170.0035 0.003453758 2229 B2R644;O94760;B4E3V1;B4DYP1;B4DGT0;O94760-2 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 1 0 1 0 1 57.923 57.923 3 7.3557E-12 17639 20230619_1880_Aki_TMTPro18x_K_F1 135.04 119.41 20076 16080 19157 18817 11394 13493 20378 18125 19062 22409 20307 17297 21780 15439 21503 23498 21289 20943 18554 14747 19421 18722 12690 14158 19990 18321 19556 22249 20827 17742 22146 16430 21870 23334 20369 19920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171230000 24352 2229 22860 45722 36815 36815 1389 1 9606 Homo sapiens -0.03474783072806531 SFCSMAGPNLIAIGSSESAQK Unmodified 2154.0085 0.0085391359 2229 B2R644;O94760;B4E3V1;B4DYP1;B4DGT0;O94760-2 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 2 0 1 61.467 61.478 3 2.0165E-16 19267 20230619_1881_Aki_TMTPro18x_K_F2 155.88 133.4 102040 77793 91949 85611 39655 47579 92288 86194 78368 114080 109610 87859 118360 111010 96043 135970 102710 107430 94232 71315 93429 85427 46735 51921 89639 86166 81975 112920 111220 91298 119510 115000 98652 134530 98237 102320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178410000 24353 2229 22860 45723 36816 36816 1 9606 Homo sapiens -0.022304792102204374 SFDDPIVQTER Unmodified 1305.6201 0.62009493 1249 Q53ZP9;A0A140VKE7;B4DZR0;O95757;E9PDE8;B4DXT2;D6RJ96;B3KNM0 HSPA4L Heat shock 70 kDa protein 4L yes no 0 0 0 2 0 1 48.374 48.445 2 5.6036E-07 13713 20230619_1881_Aki_TMTPro18x_K_F2 141.25 94.166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24354 1249 22861 45724 36817 36817 1 9606 Homo sapiens -0.02049030886996661 SFDFEIETK Unmodified 1114.5183 0.51825563 315 A0A024R4Z6;Q08945 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 4 0.816 1 1 1 58.33 58.36 3 0.053582 17679 20230619_1883_Aki_TMTPro18x_K_F4 46.606 17.548 46947 39686 43181 44324 47951 58441 62745 52424 62213 52961 45116 43684 51214 44129 49686 52515 53092 52587 43391 36372 44280 44577 49858 57879 62337 53996 62721 53244 47370 44789 52020 45960 50754 52636 50762 49949 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182160000 24355 315 22862 45725;45726;45727 36818 36818 1 9606 Homo sapiens -0.03442277238764291 SFDLISHNR Unmodified 1087.5411 0.54105675 935 A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBF7 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 6 0.816 1 1 1 37.523 37.601 3 0.021993 8564 20230619_1886_Aki_TMTPro18x_K_F6 52.255 19.065 84030 60747 79377 80977 79893 86965 88454 101300 75852 95758 98486 111220 116500 95251 95062 104240 118670 111270 77608 55807 81038 80212 83127 87797 88380 102300 79001 97453 100860 111620 117290 99274 98388 104990 113260 105640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 278950000 24356 935 22863 45728;45729;45730 36819;36820 36819 2 9606 Homo sapiens 0.0007878666935994261 SFDLLVK Unmodified 820.46945 0.46945494 552 Q6NVY0;A0A024R904;Q9HB71;Q9HB71-3 CACYBP Calcyclin-binding protein yes no 0 0 0 3.5 2.69 1 1 1 1 59.208 59.229 2 0.0074614 18142 20230619_1880_Aki_TMTPro18x_K_F1 134.12 39.348 557840 444930 481530 542170 476210 553090 497980 504060 540670 674190 608960 580070 735650 587900 573160 759780 442610 645240 515150 408210 495760 539650 496080 557370 502420 522890 552030 669260 626810 593630 738490 615380 579630 753820 426150 613330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 997050000 24357 552 22864 45731;45732;45733;45734 36821;36822 36821 2 9606 Homo sapiens 0.05203898982813371 SFDQADR Unmodified 837.3617 0.3616954 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;H0Y659;Q5H935;Q53FW4;Q3B7K0 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 2 0 1 33.544 33.602 2 0.0071349 7121 20230619_1881_Aki_TMTPro18x_K_F2 127.56 35.658 29306 13558 35934 39768 49620 46725 35527 38685 34387 27473 55843 65651 33544 47725 56274 21315 57310 56717 27076 12647 36164 38032 49990 46502 36645 39800 35879 29527 55414 64236 36143 48356 56683 23950 54820 53497 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21419000 24358 594 22865 45735 36823 36823 1 9606 Homo sapiens -0.06349097618567612 SFDSEFK Unmodified 858.37595 0.37594848 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4 0 1 49.309 49.347 2 0.0050551 13658 20230619_1883_Aki_TMTPro18x_K_F4 143.85 97.167 374370 299720 324580 367980 407860 401160 413020 402370 465990 530540 588490 608300 644960 546340 513850 652660 642340 662790 345740 275000 335330 366450 416960 403340 417800 414430 476930 531580 600490 611970 650250 571200 532680 654330 613480 629340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 676890000 24359 3881 22866 45736 36824 36824 1 9606 Homo sapiens -0.0589044519027766 SFDSNAFTLLLR Unmodified 1382.7194 0.71941505 3026 R4GMW6;H0Y6Z9;R4GMX3;Q9UBI1;B3KY73;R4GN54;H0Y4W0;R4GN06;Q5T8Z1;B7Z2U1 COMMD3-BMI1;COMMD3 COMM domain-containing protein 3 yes no 0 0 0 3 0 1 63.806 63.837 2 7.8986E-13 20051 20230619_1882_Aki_TMTPro18x_K_F3 220.74 185.3 88058 71430 82439 80525 70241 88184 75213 73200 84495 83181 83900 75609 89596 76438 82877 96799 87598 87769 81377 65481 84016 80699 74169 88247 75880 76100 85551 83331 86308 77191 90947 79894 84732 96404 83769 83458 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93830000 24360 3026 22867 45737 36825 36825 1 9606 Homo sapiens 0.04336411797771689 SFDVNKPGCEVDDLK Unmodified 1721.7931 0.79305028 3571 P41091;Q2VIR3;Q2VIR3-2 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 1 5.5 0.5 1 1 51.51 51.586 3 0.0013065 14483 20230619_1885_Aki_TMTPro18x_K_F5 74.789 61.363 190560 162590 183850 203170 180660 237710 248510 218380 248260 281610 244100 248040 267470 234910 227530 306980 282690 319400 176200 149170 187490 202270 189970 237210 246520 226160 252980 280170 251690 252880 270460 246610 235570 307750 270190 303100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 657770000 24361 3571 22868 45738;45739 36826;36827 36827 2 9606 Homo sapiens -0.038974526127731224 SFDWGYEER Unmodified 1187.4884 0.48835248 1299 A0A1U9X839;A0A1U9X830;P18615;P18615-3;H9ZYJ1;A0A0A0MSN9;B7Z6T4;E9PD43;A0A0A0MT02;A0A0G2JI50 NELFE;NELF-E;RDBP Negative elongation factor E yes no 0 0 0 2.5 0.5 1 1 52.388 52.437 2 0.0039913 15511 20230619_1881_Aki_TMTPro18x_K_F2 96.034 81.915 46594 38634 50151 53504 51042 56658 53049 53306 60024 62981 61838 60310 57367 55538 61414 64591 59307 62639 43115 35488 50682 52839 52998 56967 53606 54949 60853 63050 63169 61185 58924 57895 62283 64651 56788 59504 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64199000 24362 1299 22869 45740;45741 36828 36828 1 9606 Homo sapiens -0.09789216184094585 SFEAPIK Unmodified 790.4225 0.42250475 795 A0A075B6F6;A0A0S2Z6F0;A0A3B3IT72;A0A0S2Z5V7;A0A3B3IUB5;Q8TCT9-5;Q8TCT9;Q8TCT9-4;Q8TCT9-2 HM13 Minor histocompatibility antigen H13 yes no 0 0 0 6.5 0.5 1 1 48.207 48.29 2 0.01504 12774 20230619_1887_Aki_TMTPro18x_K_F7 117.93 71.368 610830 474370 539940 603630 657010 681510 743760 738870 830660 734850 801240 765060 843910 691130 732810 851580 897600 837730 564100 435450 556590 600030 675330 684590 747370 750650 839860 743900 825030 773220 854660 723950 756840 852080 856810 796050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 325720000 24363 795 22870 45742;45743 36829;36830 36830 2 9606 Homo sapiens 0.01891039431666286 SFEDIHHYR Unmodified 1202.5469 0.54687041 3099;636 I1SRC5;Q14015;Q14014;L7RSL8;P01116;A0A8I5KUB5;A0A8I5KQ21;A0A3G1LBH1;A0A024RAV5;P01116-2 KRAS GTPase KRas;GTPase KRas, N-terminally processed no no 0 0 0 4.5 0.5 1 1 34.679 34.748 3 0.00059832 7462 20230619_1883_Aki_TMTPro18x_K_F4 109.44 93.549 51195 29543 56874 59205 69101 74346 58056 64969 64853 48806 67930 72194 63484 51922 69574 39898 72144 63497 47295 27317 57491 57492 70488 73759 59427 66581 65743 50915 69406 71499 65202 53619 70608 41714 68942 60091 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38196000 24364 3099;636 22871 45744;45745 36831 36831 1 9606 Homo sapiens -0.04630114818974107 SFEDIHQYR Unmodified 1193.5465 0.54653606 1729 A0A804HJ06;X5D945;P01112-2;P01112;Q92468 HRAS;c-bas/has GTPase HRas;GTPase HRas, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 40.001 40.067 3 7.4017E-05 9588 20230619_1883_Aki_TMTPro18x_K_F4 117.84 101.95 52682 39851 65409 70058 88253 92428 85677 82123 96778 73759 88932 99401 94155 75382 76661 73737 110010 101830 48788 36730 65765 68501 89719 91486 86850 84395 97579 75808 91898 98879 95102 78512 80074 75712 104880 96452 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40513000 24365 1729 22872 45746;45747 36832 36832 1 9606 Homo sapiens -0.04249534538826083 SFEDPPNHAR Unmodified 1168.5261 0.52613497 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;A0A7I2V311;B3KVA0 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 2.5 0.5 1 1 31.262 31.336 3 0.00012467 6192 20230619_1881_Aki_TMTPro18x_K_F2 125.48 107.75 49292 36695 42173 45783 49087 51464 49179 49485 59744 56655 64882 60750 64410 50770 50145 60146 66010 58962 45499 33683 43554 45563 50454 51573 49913 50881 60460 57003 66255 61164 65056 53210 52169 60200 62955 56041 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85393000 24366 442 22873 45748;45749 36833;36834 36833 2 9606 Homo sapiens -0.051387051986239385 SFEEAFQK Unmodified 984.45526 0.45526144 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 5 0.816 2 2 2 52.371 52.436 2;3 1.0913E-05 15120 20230619_1883_Aki_TMTPro18x_K_F4 147.04 100.35 195800 166150 176110 183650 196500 221430 200260 196860 235430 247230 255450 254780 288190 228900 255910 308090 284120 278090 180940 152260 180890 184580 202730 220540 202810 204140 238780 247400 262580 257540 291450 241190 262640 306490 271530 264470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 496560000 24367 2980 22874 45750;45751;45752;45753;45754;45755 36835;36836;36837;36838 36835 4 9606 Homo sapiens -0.03758798236140137 SFEEEFGTASDK Unmodified 1345.5674 0.56739066 4045 Q8IXG0;Q69YP1;Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 crn;DKFZp762M013;CRNKL1 Crooked neck-like protein 1 yes no 0 0 0 2 0.816 1 1 1 52.274 52.309 3 6.4887E-07 15458 20230619_1881_Aki_TMTPro18x_K_F2 116.74 103.07 434570 367490 405170 435700 424150 487700 460780 471910 562530 521460 485610 459550 578810 437810 453070 571470 500900 460830 401690 336990 414530 435140 440410 488860 465630 484420 564400 522600 505640 468810 581470 459550 466200 565630 478520 439020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 96760000 24368 4045 22875 45756;45757;45758 36839;36840;36841 36840 3 9606 Homo sapiens -0.09157033740484621 SFENISK Unmodified 823.40758 0.40758296 3687 P61026;Q53T70 RAB10 Ras-related protein Rab-10 yes no 0 0 0 6.5 0.5 1 1 45.783 45.87 2 0.0072554 12054 20230619_1886_Aki_TMTPro18x_K_F6 134.15 56.402 1071500 880690 967000 1049700 1128100 1182900 1068800 1102600 1353700 1309900 1492900 1495400 1514900 1284300 1245500 1480400 1754900 1572000 990060 807720 993780 1048000 1157700 1184500 1090200 1137500 1368400 1318600 1525700 1502600 1533100 1342200 1300500 1489000 1672900 1492800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 653390000 24369 3687 22876 45759;45760 36842;36843 36842 2 9606 Homo sapiens -0.011184524363216042 SFENSLGINVPR Unmodified 1331.6834 0.68336389 1248 Q16851-2;A0A140VKE1;A0A7I2YQ74;Q16851;E7EUC7;B4DUP2;A0A087WYS1;B2RAN1;Q53QE9;D6W5E6 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes no 0 0 0 8 0 1 54.465 54.532 2 1.7448E-06 15532 20230619_1888_Aki_TMTPro18x_K_F8 180.19 162.33 62434 55051 66333 70787 62725 69318 70114 67508 72421 78338 76084 78580 85177 65698 79820 80364 79855 81629 57789 50516 67031 70172 65614 70167 70359 69404 73848 78579 78318 79308 86335 69006 81265 80597 76417 77511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 257160000 24370 1248 22877 45761 36844 36844 1 9606 Homo sapiens 0.030789546209007312 SFESTVGQGSDTYIYIFR Unmodified 2068.9742 0.97418577 3481 P20645;F5GX30;Q6I9U3;B2R6S2;F5GXE0;F5GXU0;F5H883;H0YGE9 M6PR Cation-dependent mannose-6-phosphate receptor yes no 0 0 0 8 0 1 62.681 62.706 3 8.248499999999999E-19 18951 20230619_1888_Aki_TMTPro18x_K_F8 181.72 166.2 46436 35537 46165 48141 40418 47932 49855 47624 53318 64252 68069 67195 77081 67354 60364 74922 69992 84116 42918 32645 46850 47575 42713 48466 49848 49131 54756 64124 69518 68099 77596 69884 62293 75638 66973 79744 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66531000 24371 3481 22878 45762 36845 36845 1 9606 Homo sapiens -0.01754236035139911 SFEVNLR Unmodified 863.45012 0.45011648 1484 A0A384NY14;Q7Z4W1;J3KS22;J3QS36;J3KRZ4;J3QS45;J3KSZ5;J3QL34 DCXR L-xylulose reductase yes no 0 0 0 7 0.816 1 1 1 47.224 47.3 2 0.0085426 12294 20230619_1887_Aki_TMTPro18x_K_F7 120.52 41.068 398910 319120 335700 410080 329450 370360 424600 389660 441870 514340 679360 699260 567390 565540 645470 588520 707450 732730 368330 292930 346680 406070 345390 377980 423220 400390 458460 518540 681250 696830 586850 588690 658100 599340 676460 694330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 474080000 24372 1484 22879 45763;45764;45765 36846 36846 1 9606 Homo sapiens 0.012929426918958598 SFEWLSQMR Unmodified 1182.5492 0.5491786 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2 0 1 60.729 60.74 2 9.765E-05 18918 20230619_1881_Aki_TMTPro18x_K_F2 156.01 126.59 116690 105220 109410 118090 90495 129350 122870 125170 147480 95017 83130 82210 80752 73368 124940 95103 93834 82266 107910 96415 111560 118380 96642 129780 122750 127350 146120 97350 88316 83775 84634 77093 124380 94608 90001 78315 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68250000 24373 3881 22880 45766 36847 36847 1 9606 Homo sapiens -0.034794024055372574 SFFDNISCDDNR Unmodified 1488.594 0.59395654 4248 Q8ND56-3;Q8ND56-2;Q8ND56;A0A140TA76;A0A0G2JQ95;A0A096LP11 LSM14A Protein LSM14 homolog A yes no 0 0 0 3.5 0.5 1 1 53.64 53.676 2 0.086032 15820 20230619_1882_Aki_TMTPro18x_K_F3 56.551 42.432 70180 60042 67585 79205 74433 86259 82044 83222 91833 90528 92989 92541 98395 81715 91671 107230 99110 115630 64892 55116 69055 78482 77018 86599 82589 85423 93063 91161 95592 93524 99924 86027 93839 107760 94870 109680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41185000 24374 4248 22881 45767;45768 36848 36848 1 9606 Homo sapiens -0.13079668120781207 SFFDNISCDDNRER Unmodified 1773.7377 0.73766066 4248 Q8ND56-3;Q8ND56-2;Q8ND56;A0A140TA76;A0A0G2JQ95;A0A096LP11 LSM14A Protein LSM14 homolog A yes no 0 0 1 3.5 0.5 1 1 47.652 47.712 3 1.1705E-06 13146 20230619_1882_Aki_TMTPro18x_K_F3 128.06 120.65 92103 77114 90392 100250 82453 91292 94132 107680 111440 112050 110350 107330 111890 95646 111480 114910 125980 130920 85165 70782 91902 99232 86611 93363 94831 108960 112540 112840 113330 108800 114140 100110 114190 116040 120430 124160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171270000 24375 4248 22882 45769;45770 36849 36849 1 9606 Homo sapiens -0.11825866080516789 SFFDNISSELK Unmodified 1285.619 0.6190323 4460 Q9BX40;Q9BX40-2;Q5TBP9 LSM14B Protein LSM14 homolog B yes no 0 0 0 7 0 1 62.519 62.555 3 2.1163E-06 18967 20230619_1887_Aki_TMTPro18x_K_F7 153.11 120.02 291880 282150 272620 285190 241530 316440 317300 280530 344960 376800 356610 370590 382030 309240 372230 389600 362860 352130 270050 258250 278230 288320 255800 316840 316350 291750 350520 375440 366610 374300 388490 325290 378260 388120 347200 334890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284060000 24376 4460 22883 45771 36850 36850 1 9606 Homo sapiens -0.012352452559071025 SFFSFAK Unmodified 832.41194 0.41194006 2013 Q9HCJ6;A8K288;Q8NDE0 VAT1L;DKFZp547P162 Synaptic vesicle membrane protein VAT-1 homolog-like yes no 0 0 0 4.5 0.5 1 1 60.315 60.342 2 0.013637 18072 20230619_1885_Aki_TMTPro18x_K_F5 113.7 64.337 81482 90431 84767 86714 55939 64507 139290 146670 161270 83203 67423 55488 83644 59727 91651 100300 72621 61979 75537 82700 85484 87762 62615 68819 136170 142390 159000 86696 74273 57899 85188 63634 92053 97976 69594 59313 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62251000 24377 2013 22884 45772;45773 36851 36851 1 9606 Homo sapiens -0.010969432227739162 SFFSGTQER Unmodified 1057.4829 0.48287317 2589 B4DTY8;P56199 ITGA1 Integrin alpha-1 yes no 0 0 0 6.5 0.5 1 1 44.009 44.096 2 2.2386E-05 10982 20230619_1887_Aki_TMTPro18x_K_F7 168.25 137.02 55868 48960 55930 63305 71443 76332 66398 69139 79423 69392 73878 68619 68812 62041 77339 71060 77958 77213 51683 44930 57086 62904 72840 76032 67645 71121 79936 70118 75825 69496 70823 64690 78492 71632 74579 73275 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52705000 24378 2589 22885 45774;45775 36852 36852 1 9606 Homo sapiens -0.04356894975899195 SFFTASEGCSNPLGGGR Unmodified 1742.7682 0.76823251 1948 A4FVC0;Q9UKV8-2;Q9UKV8 EIF2C2;AGO2 Protein argonaute;Protein argonaute-2 yes no 0 0 0 1 0 1 54.777 54.777 3 1.892E-18 16334 20230619_1880_Aki_TMTPro18x_K_F1 179.14 168.09 46855 38980 49086 56772 48485 59765 57388 50535 54139 70252 68035 64369 64737 61599 60215 77569 70985 71301 43347 35826 49728 55874 50668 59968 57251 52818 55962 69748 68986 65537 66010 64445 62003 77293 67816 67788 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26280000 24379 1948 22886 45776 36853 36853 1 9606 Homo sapiens -0.07344087695491908 SFGIEDK Unmodified 794.38103 0.38103386 4309 Q92878-2;Q92878;A0A494C1B7;Q32P42;A8K3I2;E7EN38;A0A494C122;E7ESD9;A0A494BZX5;A5D6Y3;E9PM98;A0A494BZW0 RAD50 DNA repair protein RAD50 yes no 0 0 0 4.5 1.12 1 1 1 1 47.513 47.582 2 0.016498 12872 20230619_1883_Aki_TMTPro18x_K_F4 109.86 61.359 132160 105240 113610 133510 139600 176430 140220 160200 256820 180490 191170 312740 275490 250740 148850 352100 365130 399770 122040 96589 117500 133030 143440 174700 144890 165300 252260 185520 203530 309250 272910 265930 166650 354160 347500 379070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119490000 24380 4309 22887 45777;45778;45779;45780 36854 36854 1 9606 Homo sapiens -0.024381413276614694 SFGIEDKDK Unmodified 1037.5029 0.50293991 4309 Q92878-2;Q92878;A0A494C1B7;Q32P42;A8K3I2;E7EN38;A0A494C122;E7ESD9;A0A494BZX5;A5D6Y3;E9PM98;A0A494BZW0 RAD50 DNA repair protein RAD50 yes no 0 0 1 5 0 1 44.999 45.077 3 0.0039018 11678 20230619_1885_Aki_TMTPro18x_K_F5 84.817 56.649 102900 88044 114820 116500 145480 122110 133860 124330 110580 121630 145490 89034 99177 66624 156280 70051 73135 46509 95269 80824 116070 115390 147940 123200 134960 126810 115370 122000 145340 91217 105140 69718 152840 69335 70594 44522 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137690000 24381 4309 22888 45781 36855 36855 1 9606 Homo sapiens -0.014311440359733751 SFGQTPSQLLIEPHPPR Unmodified 1902.9952 0.99519598 1543 P50851;P50851-2;A0A494BZW2;A0A494C1L5;E9PEM5;Q59HC1;A0A8V8TM79;B3KVI6;Q68D03;A0A8V8TKR0;A0A8V8TLZ6;A0A3B3ISK3;A0A3B3IS13;A0A8V8TL26 LRBA;DKFZp686K03100 Lipopolysaccharide-responsive and beige-like anchor protein yes no 0 0 0 1 0 1 51.767 51.767 3 1.2897E-23 15094 20230619_1880_Aki_TMTPro18x_K_F1 203.99 184.78 15728 13872 17341 17645 15357 19873 18258 21076 18550 19988 19454 20906 24982 20618 25534 21342 22730 21771 14563 12728 17458 17541 16201 19943 18265 21408 18933 20281 20180 21169 25338 21319 25776 21476 21768 20678 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24282000 24382 1543 22889 45782 36856 36856 1 9606 Homo sapiens 0.07981818855000711 SFGSTCQLSEK Unmodified 1242.5551 0.55505184 3433 P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 6.5 0.5 2 2 45.708 45.795 2;3 2.5959E-06 12033 20230619_1886_Aki_TMTPro18x_K_F6 124.42 100.57 145710 116180 141130 132560 126190 181200 125620 132570 193210 147490 159670 143670 169580 123320 112160 163860 152270 131880 134680 106520 143500 133180 132730 178330 128830 139160 191530 148300 165610 145430 169930 130070 117550 162080 145160 125670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 475170000 24383 3433 22890 45783;45784;45785;45786 36857;36858 36857 2 9606 Homo sapiens -0.056523486845208026 SFGTEDRPTDRPAPPR Unmodified 1797.8758 0.87580912 4460 Q9BX40;Q5TBQ0;Q9BX40-2;Q5TBQ1;A0A0C4DFV2 LSM14B Protein LSM14 homolog B yes no 0 0 2 5 0 1 33.582 33.666 4 1.4421E-05 7051 20230619_1885_Aki_TMTPro18x_K_F5 106.36 92.003 24805 12386 23969 28633 25430 30827 29706 29065 32370 29009 35532 33403 32516 31451 30707 26501 33905 33321 22874 11491 24474 27571 26436 30926 29787 29821 32928 29463 36160 33642 33219 32237 31409 27113 32405 31579 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35288000 24384 4460 22891 45787 36859 36859 1 9606 Homo sapiens 0.008786252302570574 SFIDTSR Unmodified 824.40283 0.40283194 4737 Q9Y4C8;A0A024RBL4 RBM19 Probable RNA-binding protein 19 yes no 0 0 0 5 0 1 41.157 41.245 2 0.023568 10031 20230619_1885_Aki_TMTPro18x_K_F5 100.39 57.267 100400 77052 92101 101590 124330 124180 108740 114580 146600 122330 123830 133530 140250 115480 109980 150820 145990 126190 92735 70760 94771 100850 126160 123660 111700 117900 146290 123610 128860 134460 141200 121550 114570 149500 139200 120190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98002000 24385 4737 22892 45788 36860 36860 1 9606 Homo sapiens -0.016393365790918324 SFIPSLVEK Unmodified 1018.5699 0.56989727 2320 B2RDN4;Q14137;A8K3R2;B4DEN9;Q14137-2;Q4G0D9;Q6DKJ9;A0A075B729 BOP1 Ribosome biogenesis protein BOP1 yes no 0 0 0 2 0 1 60.009 60.02 3 0.00088291 18658 20230619_1881_Aki_TMTPro18x_K_F2 100.02 62.289 19025 17501 19434 21477 23498 22929 26504 18991 24904 17343 17855 11407 19235 14903 24187 16294 13596 12753 17609 16049 19783 21378 24129 22996 26473 19655 25159 17462 18686 11996 19802 15339 23879 16183 13106 12154 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10520000 24386 2320 22893 45789 36861 36861 1 9606 Homo sapiens 0.06135511245804537 SFLDSGYR Unmodified 943.43995 0.43994572 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9;B4DKC9 VCL;HEL114 Vinculin yes no 0 0 0 6.5 0.5 1 1 47.09 47.175 2 0.0050496 12280 20230619_1887_Aki_TMTPro18x_K_F7 114.65 95.289 185150 161570 173760 191460 255820 270320 263820 258280 332480 270340 214960 230880 296260 209430 244950 283060 263990 272560 171180 148140 178840 191940 259460 267110 267430 264880 330220 271520 229740 235420 297130 220870 251240 282550 252460 258960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192460000 24387 51 22894 45790;45791 36862 36862 1 9606 Homo sapiens -0.03403665033329162 SFLEDIRK Unmodified 1006.5447 0.54474515 3630 P52209-2;P52209;B4E2U0;B4DL86;B4DV68;A9Z1X1;K7ELN9 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 1 7.5 0.5 1 1 50.333 50.412 3 0.0014231 13677 20230619_1888_Aki_TMTPro18x_K_F8 107.57 62.493 1805000 1457500 1613300 1642200 1864000 2136300 2013300 1986600 2314000 2166600 2080400 2074900 2313700 2012900 2012100 2829100 2403400 2424800 1667500 1336100 1659000 1650300 1921600 2119400 2030200 2044100 2331500 2177900 2155600 2110100 2340600 2120800 2077500 2804700 2295900 2307300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2115499999.9999998 24388 3630 22895 45792;45793 36863;36864 36864 2 9606 Homo sapiens 0.04173456443231771 SFLEGTMQVAQSR Unmodified 1452.7031 0.70311306 341 C9JM66;A0A024R5H2;E9PG19;O94868-3;O94868-2;O94868 FCHSD2 F-BAR and double SH3 domains protein 2 yes no 0 0 0 1 0 1 54.238 54.238 3 0.0014693 16099 20230619_1880_Aki_TMTPro18x_K_F1 70.26 63.727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24389 341 22896 45794 36865 36865 1 9606 Homo sapiens -0.005130374306418162 SFLLDLLNATGK Unmodified 1290.7184 0.71835242 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;A0A2R8YDH3;Q5S4N1;A0A0J9YVQ7 DDX3X ATP-dependent RNA helicase DDX3X yes no 0 0 0 4.2 0.748 1 2 2 65.825 65.854 2;3 0.0020375 20531 20230619_1885_Aki_TMTPro18x_K_F5 77.124 64.497 17215 13364 16485 15752 16861 18107 18393 21969 22845 22442 18617 16819 25244 17746 18346 24610 16899 21321 15907 12258 16807 15754 17529 18221 18602 22167 22871 22481 19571 17376 25198 18657 18733 24417 16213 20269 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 195200000 24390 1018 22897 45795;45796;45797;45798;45799 36866;36867 36867 2 9606 Homo sapiens 0.08462197428821128 SFLPLIR Unmodified 844.51707 0.51707383 1448 H7C2W1;C9K0G7;E9PCG9;A0A384MTY4;Q02338;C9JM78;C9JQ90;A0A0G2JRX6 BDH1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 59.347 59.405 2 0.036784 17651 20230619_1885_Aki_TMTPro18x_K_F5 92.191 8.9034 52645 50935 54035 50086 54989 64547 68186 71790 76670 54132 71629 78160 65659 69708 83362 66700 79576 94100 48746 46609 54783 50899 57421 64346 68249 72346 77308 56412 73557 77976 68138 71989 84159 68663 76275 89033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31774000 24391 1448 22898 45800;45801 36868 36868 1 9606 Homo sapiens 0.08859597973651034 SFLSQGQVLK Unmodified 1105.6132 0.61315906 3597 P48047;Q53HH2;H7C068 ATP5O ATP synthase subunit O, mitochondrial yes no 0 0 0 2.5 0.5 1 1 53.826 53.866 2 2.2358E-19 15870 20230619_1882_Aki_TMTPro18x_K_F3 257.83 197.12 319320 247080 287330 335790 293960 360940 391350 358550 417770 385730 379120 403690 437720 369020 387900 454550 426620 435320 294920 226970 295060 332050 307740 362850 389580 367300 422530 389000 393560 407860 442540 386310 397820 454160 407870 413640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237460000 24392 3597 22899 45802;45803 36869 36869 1 9606 Homo sapiens 0.06457701023077789 SFLVASVLPGPDGNINSPTR Unmodified 2040.064 0.064003825 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67;Q7Z3K3-3;B4DSK8 POGZ Pogo transposable element with ZNF domain yes no 0 0 0 3 0 1 62.241 62.27 3 1.8886E-11 19362 20230619_1882_Aki_TMTPro18x_K_F3 134.04 110.44 24654 22335 32758 31018 26560 34022 34577 35403 38710 32532 32018 35958 32819 30613 34916 33511 31177 38972 22874 20510 32509 30654 28308 34185 34535 35994 38916 33141 33239 36153 33585 31903 35257 33941 29920 36930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56639000 24393 4164 22900 45804 36870 36870 1 9606 Homo sapiens 0.0855743836405054 SFMALSQDIQK Unmodified 1266.6278 0.62782285 3890 Q14444-2;Q14444;G3V153;B3KXU8;E9PLA9;B4DSF8 CAPRIN1 Caprin-1 yes no 0 0 0 4.5 3.5 1 1 58.673 58.697 3 9.1681E-18 17245 20230619_1888_Aki_TMTPro18x_K_F8 202.03 162.12 262260 205220 236390 245700 210270 292120 262460 259360 310140 184800 155750 129490 163490 128990 192160 182500 169070 122470 242240 188260 242030 245430 222480 290940 263000 265220 306740 189350 167330 134150 167970 135900 193550 179230 161670 117130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 918430000 24394 3890 22901 45805;45806 36871;36872 36872 2 9606 Homo sapiens 0.005174051089170462 SFMALSQDIQK Oxidation (M) 1282.6227 0.62273747 3890 Q14444-2;Q14444;G3V153;B3KXU8;E9PLA9;B4DSF8 CAPRIN1 Caprin-1 yes no 0 1 0 7 0 1 53.91 53.977 3 6.3711E-05 15418 20230619_1887_Aki_TMTPro18x_K_F7 121.29 101.18 86854 80465 81663 92685 90990 103800 105840 100500 112650 80891 82951 67070 81753 62007 97879 96181 122150 80399 80339 73743 83614 92752 94198 104050 106020 102390 113090 82440 86400 68675 84252 65962 100560 95224 116350 76684 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 366930000 24395 3890 22901 45807 36873 36873 2570 1 9606 Homo sapiens -0.007268987536917848 SFMESGGTVLSTNWSDVGK Oxidation (M) 2016.9099 0.90987095 2079 A8K5T7;Q9Y2Z0;B4DYC6;Q9Y2Z0-2;A8K7W3 SUGT1 Suppressor of G2 allele of SKP1 homolog yes no 0 1 0 7 0 1 59.836 59.882 3 1.794E-10 17750 20230619_1887_Aki_TMTPro18x_K_F7 131.45 119.97 42855 37583 41286 45396 46629 43726 47131 39254 44345 49461 53846 43936 53319 39805 47472 57395 46271 49944 39633 34465 42165 45180 47949 44273 47404 40718 45739 49268 54710 44768 54107 42148 48368 56946 44309 47503 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30963000 24396 2079 22902 45808 36874 36874 1300 1 9606 Homo sapiens -0.05790759183651062 SFMESGGTVLSTNWSDVGK Unmodified 2000.915 0.91495633 2079 A8K5T7;Q9Y2Z0;B4DYC6;Q9Y2Z0-2;A8K7W3 SUGT1 Suppressor of G2 allele of SKP1 homolog yes no 0 0 0 8 0 1 62.205 62.234 3 1.5444E-24 18728 20230619_1888_Aki_TMTPro18x_K_F8 195.46 189.47 114320 96084 106850 116030 100530 118520 118290 114870 127090 140820 118890 120440 133590 120040 115660 146010 123760 129750 105670 88127 109140 115580 105470 119580 118520 118310 128780 140300 123020 123170 135080 125190 118540 145320 118370 123380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164000000 24397 2079 22902 45809 36875 36875 1 9606 Homo sapiens -0.04546455321042231 SFMNNWEVYK Oxidation (M) 1332.5809 0.58087266 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162;Q7KYX9 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 1 0 8 0 1 55.305 55.367 3 0.0011707 15872 20230619_1888_Aki_TMTPro18x_K_F8 96.015 81.596 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24398 116 22903 45810 36876 36876 49 1 9606 Homo sapiens -0.0721145444222202 SFNIPLLVLGGGGYTVR Unmodified 1761.9778 0.977755 3243 O15379;O15379-2;Q9H368 HDAC3 Histone deacetylase 3 yes no 0 0 0 8 0 1 65.043 65.063 3 0.00034788 19956 20230619_1888_Aki_TMTPro18x_K_F8 75.55 55.711 22972 20768 22434 22370 22956 29583 24891 27701 27944 21464 27460 32155 29498 26453 27579 29512 31087 33693 21251 19023 22847 22565 23892 29316 25091 28254 28248 22359 28320 31966 29963 27627 28282 29837 29728 31948 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13035000 24399 3243 22904 45811 36877;36878 36877 2 9606 Homo sapiens 0.12724523319934633 SFNLSALEK Unmodified 1007.5288 0.52876073 2754 C9JIF9;P13798;H7C393;H7C1U0;C9JLK2 APEH Acylamino-acid-releasing enzyme yes no 0 0 0 4.5 3.5 1 1 57.626 57.652 2 0.0028832 16831 20230619_1888_Aki_TMTPro18x_K_F8 97.813 45.959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24400 2754 22905 45812;45813 36879;36880 36880 2 9606 Homo sapiens 0.025297502063153843 SFPAAIEHTIQWAR Unmodified 1625.8314 0.83142511 1889 A1LT96;A0AVT1;B3KSS1;A0AVT1-2;H0Y8S8 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 0 2.5 0.5 1 1 58.112 58.134 3 1.4297E-12 17686 20230619_1882_Aki_TMTPro18x_K_F3 191.84 144.64 123780 105800 128730 132510 116690 148750 138080 143940 184720 138740 129900 123880 142180 111220 132910 149450 143500 143180 114520 97072 130230 131850 122950 149010 139420 147210 183240 140150 136350 126070 144250 117230 135990 149160 137200 136060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75444000 24401 1889 22906 45814;45815 36881;36882 36882 2 9606 Homo sapiens 0.04354265874758312 SFPDFPTPGVVFR Unmodified 1464.7402 0.74015049 3401 P07741;H3BQZ9;P07741-2;H3BQB1;H3BQF1;H3BSW3;Q12898 APRT Adenine phosphoribosyltransferase yes no 0 0 0 2.5 0.5 2 2 62.893 62.913 2;3 2.9263E-10 19675 20230619_1882_Aki_TMTPro18x_K_F3 215.72 170.63 181070 160700 183110 172980 144370 182360 178990 184820 195790 232520 230740 226250 259830 209300 225620 250000 226260 257040 167540 147210 185210 173930 154120 183760 179120 189880 200080 232180 236330 229410 262510 218700 230210 250900 216690 243950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1433800000 24402 3401 22907 45816;45817;45818;45819 36883;36884;36885 36885 3 9606 Homo sapiens 0.02637002177402792 SFPDTVYK Unmodified 955.4651 0.46509784 4008 Q53SW3;Q9BPU6 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 7 0 1 50.116 50.197 2 0.033806 13728 20230619_1887_Aki_TMTPro18x_K_F7 84.568 54.383 83359 68558 78914 83926 65142 80870 68228 65770 79829 97441 92663 88634 97298 79798 87756 105260 102600 94314 77048 62894 80350 83446 68938 81661 69031 69114 81282 96501 94639 90090 98690 83959 90317 104700 97964 89726 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152630000 24403 4008 22908 45820 36886 36886 1 9606 Homo sapiens -0.014416102307677647 SFPFVSK Unmodified 810.42759 0.42759012 2980 F8VPD4;P27708;Q53SY7;Q5R210;Q5R208;Q5R206;A8K134;A0A024R454;P31327-2;P31327;P31327-3 CAD;CPS1 CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase;Carbamoyl-phosphate synthase [ammonia], mitochondrial yes no 0 0 0 3.5 0.5 1 1 55.685 55.71 2 0.015793 16510 20230619_1883_Aki_TMTPro18x_K_F4 110.81 60.768 709390 647420 686690 690630 705620 820040 741760 732040 838520 876500 850680 858460 926650 765470 864710 1029800 940140 1022200 656250 592950 699790 695910 732860 817590 748970 757740 849770 877560 875680 869390 940310 806820 885500 1029600 899360 970710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 288830000 24404 2980 22909 45821;45822 36887;36888 36888 2 9606 Homo sapiens 0.014793432942951767 SFPGFQAFCETQGDR Unmodified 1745.7468 0.74676879 3784 Q01780-2;Q01780;B4DKG8;Q59G73;B4DFE4;K7EJ37 EXOSC10 Exosome component 10 yes no 0 0 0 6.5 0.5 1 1 59.14 59.197 3 3.7503E-08 17742 20230619_1886_Aki_TMTPro18x_K_F6 139.94 133.5 87756 66422 82443 90572 80828 86399 90289 88094 109450 90395 86956 74454 82883 72554 87296 79483 75019 80369 81067 61023 84210 89414 84352 87718 91074 89960 109470 90793 90030 76268 84933 75285 87973 79847 71934 76306 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143520000 24405 3784 22910 45823;45824 36889;36890 36889 2 9606 Homo sapiens -0.09627472724196195 SFPPPGPAEGLLR Unmodified 1336.7139 0.71393574 2938 E9PMI6;J3KN38;P54105;E9PJF4;E9PQ83 CLNS1A Methylosome subunit pICln yes no 0 0 0 1 0 1 55.769 55.769 2 1.5544E-05 16813 20230619_1880_Aki_TMTPro18x_K_F1 128.51 95.904 69333 54988 68521 61214 56160 65022 59702 56800 61724 69168 67103 67786 78498 60778 68099 77002 76706 78163 64091 50407 69435 61395 59429 65291 60102 58944 63044 69192 69101 68645 79222 63819 69953 77157 73319 74222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39698000 24406 2938 22911 45825 36891 36891 1 9606 Homo sapiens 0.059047330059456726 SFPVNSDVGVLK Unmodified 1260.6714 0.67140222 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 0 7.5 0.5 1 1 56.142 56.199 3 5.9359E-12 16233 20230619_1888_Aki_TMTPro18x_K_F8 142.12 90.19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24407 2181 22912 45826;45827 36892;36893 36893 2 9606 Homo sapiens 0.0514933787769678 SFPVPDFLPNQLR Unmodified 1528.8038 0.80381338 4203 Q8IVL6;Q8IVL6-2 LEPREL2 Prolyl 3-hydroxylase 3 no no 0 0 0 3 0 1 63.214 63.244 3 0.0056232 19761 20230619_1882_Aki_TMTPro18x_K_F3 69.846 54.58 16455 14279 19251 17506 16961 23805 20401 19180 18227 17967 17590 21869 25145 19259 24625 23453 19302 22630 15242 13097 19286 17498 17914 23473 20309 19884 18678 18344 18449 21931 25376 20179 24750 23461 18542 21490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31060000 24408 4203 22913 45828 36894 36894 1 9606 Homo sapiens 0.060563626145267335 SFQEILQIVSPVR Unmodified 1514.8457 0.84567819 1336 B7ZM73;A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;Q7Z3U7-3 MON2 Protein MON2 homolog yes no 0 0 0 4 0 1 64.712 64.722 3 0.086799 20351 20230619_1883_Aki_TMTPro18x_K_F4 36.96 26.436 5818.6 5580.7 4575.6 5543.3 5369 5690 7187.6 8499.6 8745.4 5806.4 6891.5 7210.1 9114.2 8133.1 7117.8 10298 9309.6 7735.1 5376.6 5107.3 4770.8 5609.1 5565.3 5809.2 7188.3 8411.7 8736.5 6058.7 7256.3 7299.3 9142.9 8466.1 7410.8 10162 8875.3 7379.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9071800 24409 1336 22914 45829 36895 36895 1 9606 Homo sapiens 0.10884918303031554 SFQQELDAR Unmodified 1092.52 0.51998696 268 A0A024R3V8;Q99598;C4P0D6;C4P0D8;Q5VVQ1;C4P0D4 TSNAX;DISC1 Translin-associated protein X yes no 0 0 0 3.5 0.5 1 1 43.89 43.947 2 0.00078081 11354 20230619_1882_Aki_TMTPro18x_K_F3 123.63 89.523 412520 307490 332840 393240 410870 476760 430020 446610 477710 485930 532990 540730 558830 495180 480940 555380 619740 589810 380630 282330 346330 391070 421520 474970 433980 459300 486270 490670 545380 544970 566070 515420 498470 558880 591410 559950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 304490000 24410 268 22915 45830;45831 36896 36896 1 9606 Homo sapiens -0.022572234301378558 SFQQSSLSR Unmodified 1038.5094 0.50942227 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991;Q68E03;D6RB45;A0A1B0GX04;D6R8Z5;D6REK4;D6RCM3;D6RBS2;D6R9F3 MATR3;DKFZp686K23100;DKFZp686L22104 Matrin-3 yes no 0 0 0 7.5 0.5 1 1 37.391 37.416 2 6.8046E-06 8244 20230619_1887_Aki_TMTPro18x_K_F7 180.27 129.37 245330 182660 220930 229660 310620 318140 284160 291460 385870 189980 186720 145330 181170 137690 226010 196090 215020 140920 226540 167680 227840 229220 314870 314390 290980 296760 378840 196500 200520 149610 187210 145400 228230 193140 205320 134710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 767110000 24411 1059 22916 45832;45833 36897;36898 36897 2 9606 Homo sapiens -0.00829206084586076 SFQTGTNAR Unmodified 980.46756 0.46755746 2646 B4E205;O95486 SEC24A Protein transport protein Sec24A yes no 0 0 0 7 0 1 32.314 32.407 2 0.00035912 6298 20230619_1887_Aki_TMTPro18x_K_F7 109.29 77.918 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24412 2646 22917 45834 36899 36899 1 9606 Homo sapiens -0.023457617730855418 SFSEFGK Unmodified 800.37047 0.37046918 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PH35;B4DMD1;A0A6Q8PHG0 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 7 0.816 1 1 1 49.664 49.742 2 0.0073979 13446 20230619_1887_Aki_TMTPro18x_K_F7 134.85 92.872 3751100 3044000 3371600 3576000 3658600 4261900 4114500 3809600 4050400 4218000 4756200 4811500 4847500 3875300 4366800 5376300 5344500 4940500 3465500 2791500 3462700 3576900 3791400 4247200 4120300 3935000 4158700 4258400 4851200 4828000 4920700 4107600 4508300 5351100 5101400 4698600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1393900000 24413 3254 22918 45835;45836;45837 36900;36901 36901 2 9606 Homo sapiens -0.03770123982087625 SFSQEGR Unmodified 809.36678 0.36678078 560 A0A024R983;P10155;P10155-3;P10155-5;P10155-4;P10155-2;H0Y9N5 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 0 0 3 0.816 1 1 1 31.454 31.523 2 0.057866 6319 20230619_1881_Aki_TMTPro18x_K_F2 82.671 41.369 30885 16942 42008 43828 58909 60973 46964 56971 46290 33658 59465 62240 42851 45185 52981 25882 69945 57063 28585 15743 42007 42219 59458 60207 48069 57830 47641 36131 59702 61280 44814 46136 54472 28160 66670 53916 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52636000 24414 560 22919 45838;45839;45840 36902 36902 1 9606 Homo sapiens -0.04552793755954099 SFSSQRPGMER Oxidation (M) 1296.5881 0.5880833 1307 P48634;A0A1U9X982;A0A1U9X9A9;A0A1U9X999;A0A1U9X998;A0A1U9X993;A0A1U9X988;A0A1U9X996;A0A1U9X985;A0A1U9X977;A0A1U9X975;A0A1U9X974;A0A1U9X9A5;A0A1U9X987;A0A1U9X972;P48634-3;P48634-2;B4DLY2 PRRC2A Protein PRRC2A yes no 0 1 1 7.5 0.5 1 1 28.913 28.978 3 0.030258 5381 20230619_1888_Aki_TMTPro18x_K_F8 62.466 37.675 16379 12268 19493 20966 20413 21967 20847 20093 25916 19356 20530 18524 21898 17968 19134 21772 22845 17990 15161 11303 19565 20456 21136 22083 21149 20643 25883 19594 21361 18839 22176 18752 19723 21602 21788 17144 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21194000 24415 1307 22920 45841;45842 36903;36904 36904 823 2 9606 Homo sapiens -0.04834721841780265 SFSSQRPVDR Unmodified 1177.584 0.5839842 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;H7C5N8 PRRC2C Protein PRRC2C yes no 0 0 1 7 0.816 1 1 1 30.85 30.899 3 0.00028577 5961 20230619_1888_Aki_TMTPro18x_K_F8 156.18 134.95 66062 43674 66954 71108 76115 78026 76927 77917 81561 61810 77451 75822 82585 69764 73045 69300 81679 71111 61020 40235 68097 69613 78300 78344 77672 79188 82593 63788 79874 76162 83671 72131 74893 69778 77993 67561 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38953000 24416 2894 22921 45843;45844;45845 36905;36906 36906 2 9606 Homo sapiens 0.0022955672679927375 SFSTALYGESDL Unmodified 1288.5823 0.58231244 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3;A0A0S2Z3X3;A0A0S2Z3C0 ACTN4 Alpha-actinin-4 yes no 0 0 0 3.5 0.5 1 1 62.712 62.73 2 0.00049714 19563 20230619_1882_Aki_TMTPro18x_K_F3 105.78 87.473 29751 32460 35221 25434 28850 37268 30986 33947 33031 37972 33990 31889 31930 28325 30277 37718 30904 39766 27609 29644 35172 26475 30556 36730 31216 34987 33607 37964 34726 32535 32581 29839 30897 37841 29624 37716 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125140000 24417 1069 22922 45846;45847 36907 36907 1 9606 Homo sapiens -0.05043541872487367 SFTASCPVSAFVPK Unmodified 1496.7334 0.73335055 4122 Q6P587;Q6P587-2;Q6P587-3 FAHD1 Acylpyruvase FAHD1, mitochondrial yes no 0 0 0 3 0 1 58.998 59.027 3 1.2437E-08 18026 20230619_1882_Aki_TMTPro18x_K_F3 150.69 133.67 58113 40745 51726 63940 50914 62966 58659 65684 67712 55506 60781 48191 61195 51925 51160 63058 62731 55733 53638 37508 53146 62613 53236 63755 58996 66631 68148 56442 62609 49465 61978 54027 52902 62747 59860 53039 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60436000 24418 4122 22923 45848 36908 36908 1 9606 Homo sapiens 0.004853212344869462 SFTVDIR Unmodified 836.43922 0.43921744 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;H0Y394;Q6ZS03;B4DKR8;Q96CF6;Q2HJC8;Q6ZN49;H7BZC3;H7C2D1 HDLBP Vigilin yes no 0 0 0 6.5 0.5 1 1 48.205 48.288 2 0.0069009 12812 20230619_1887_Aki_TMTPro18x_K_F7 129.4 64.532 245530 211720 243110 244070 229960 280180 273100 254950 309940 288820 277370 258450 293830 230630 267380 325480 267240 279690 227100 194080 247020 244360 241290 279980 273980 263130 312370 289230 286720 262970 297980 243880 272690 322810 255780 266090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158270000 24419 292 22924 45849;45850 36909;36910 36910 2 9606 Homo sapiens 0.014455403176043546 SFVAYEELIK Acetyl (Protein N-term) 1239.6387 0.63870511 407 A0A024R6Q2;Q96FX7 C14orf172;TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A yes no 1 0 0 3.5 0.5 1 1 65.56 65.582 2 2.6811E-08 20633 20230619_1883_Aki_TMTPro18x_K_F4 112.94 70.957 42320 30271 32531 41837 32877 31795 34989 38749 37153 40410 41093 34010 42725 31427 40444 44293 39734 41621 39026 27822 33911 41158 34168 33080 35246 39153 37907 40537 42003 34770 43406 33211 41149 44141 38037 39553 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 61615000 24420 407 22925 45851;45852 36911;36912 36912 2 9606 Homo sapiens 0.028471307548443292 SFVDAEVDVTR Unmodified 1236.5986 0.59863121 1500 A0A3B3IRP5;Q6P1J9;A0A0S2Z5M9;A0A1B0GUB2;A0A2R8YHB3;A0A0S2Z5N1;B4DV47 CDC73 Parafibromin yes no 0 0 0 3 0 1 50.606 50.676 2 0.017825 14424 20230619_1882_Aki_TMTPro18x_K_F3 75.229 55.065 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24421 1500 22926 45853 36913 36913 1 9606 Homo sapiens -0.010204159157183312 SFVEFILEPLYK Unmodified 1483.7963 0.79626839 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 2 0 1 66.709 66.715 3 0.00019024 21492 20230619_1881_Aki_TMTPro18x_K_F2 99.215 79.972 9396.7 8589.1 5037.1 7707.4 7321.6 9518.6 9091.8 6383.8 9316.7 8243.4 8778.5 8878.5 7803.1 8261.5 9292.7 9227.9 7977.4 7932.2 8661.8 7855.6 5533.5 7879.4 7493 9419.7 9058.9 6797.7 9452.1 8258.4 8994.6 8963.3 8075.4 8582.9 9350.7 9187.6 7645.1 7548 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5423300 24422 2436 22927 45854 36914 36914 1 9606 Homo sapiens 0.07372210294238357 SFVIDHQR Unmodified 1000.509 0.50902834 191 A0A024R277;A0A8I5QKQ8;A0A8I5KUM4;Q6NUL7;O15269 SPTLC1 Serine palmitoyltransferase 1 yes no 0 0 0 6.5 0.5 1 1 36.069 36.133 3 0.00015986 8007 20230619_1886_Aki_TMTPro18x_K_F6 147.19 108.77 40290 29516 36229 36958 43035 47936 50838 50455 140010 44282 49448 57504 52344 44835 46814 51059 61006 61634 37200 27097 37257 36864 44575 47688 53433 51197 133620 45710 55130 57329 53136 47001 48506 51788 58237 58426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106510000 24423 191 22928 45855;45856 36915 36915 1 9606 Homo sapiens 0.008794189862328494 SFVLNLGK Unmodified 876.5069 0.50690308 1431 A0A384MR27;P09382 LGALS1 Galectin-1 yes no 0 0 0 4 0.816 1 1 1 58.458 58.487 2 0.0017391 17654 20230619_1883_Aki_TMTPro18x_K_F4 155.82 97.212 833450 748370 720140 761000 1229900 2316500 362220 2522200 476640 252960 294800 187170 271570 184040 621210 312350 277890 178340 770270 685170 749390 788480 1222600 2225100 425190 2492800 472420 373180 310000 195630 293960 196790 604850 305340 268510 171180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6063799999.999999 24424 1431 22929 45857;45858;45859 36916;36917 36917 2 9606 Homo sapiens 0.06370990248422004 SFYGSTLFLCR Unmodified 1349.6438 0.64380726 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 5 0 1 60.913 60.963 2 9.9158E-06 18328 20230619_1885_Aki_TMTPro18x_K_F5 176.33 132.52 75327 72441 68706 69432 121630 266290 93933 85579 342100 40725 41477 45869 40145 38605 56020 48969 52147 44979 69679 66276 71317 72777 123050 249810 103580 98608 321440 44639 56585 46127 41967 40577 56430 48847 49882 42790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195050000 24425 3606 22930 45860 36918 36918 1 9606 Homo sapiens -0.017028886541766042 SFYPEEVSSMVLTK Oxidation (M) 1631.7753 0.77527495 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;P11142-2;Q53HF2;E9PN89;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PPY6;E9PN25;E9PI65;E9PK54 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein no no 0 1 0 7 0.816 1 1 1 59.191 59.243 3 5.8872E-09 17700 20230619_1886_Aki_TMTPro18x_K_F6 158.11 139.93 428920 371810 404510 461750 433170 466100 445730 432170 538050 501590 488230 444490 513850 422560 438890 581170 509180 529210 396570 341080 413690 458920 448090 470300 451550 445810 541000 501630 504020 453430 520060 445070 452290 578120 486640 503130 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 2141299999.9999998 24426 3430;2926 22931 45861;45862;45863 36919;36920;36921;36922;36923 36919 1743 5 9606 Homo sapiens -0.015341678676122683 SFYPEEVSSMVLTK Unmodified 1615.7804 0.78036033 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;P11142-2;Q53HF2;E9PN89;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PPY6;E9PN25;E9PI65;E9PK54 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein no no 0 0 0 7.5 0.5 1 1 62.414 62.444 3 2.0067E-16 18805 20230619_1888_Aki_TMTPro18x_K_F8 202.29 180.46 2284700 1832600 1934500 2225000 1684200 2405000 2353200 1891000 2182100 3050700 2744300 2652600 3220300 2682400 2511300 3606900 3187500 3289200 2109700 1681200 1993200 2216500 1791400 2405600 2328300 1999800 2259300 3008400 2809100 2712900 3237900 2815200 2609500 3588500 3043900 3127100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 9698700000 24427 3430;2926 22931 45864;45865 36924;36925;36926 36926 3 9606 Homo sapiens -0.0028986400500343734 SFYQGEK Unmodified 857.39193 0.3919329 2525 B4DM26;B4DLE7;Q6UWP7-3;Q6UWP7;B4DYR5 LCLAT1 Lysocardiolipin acyltransferase 1 yes no 0 0 0 6 0.816 1 1 1 42.939 43.025 2 0.030343 10814 20230619_1886_Aki_TMTPro18x_K_F6 95.099 36.494 89336 73010 81209 73782 106020 100970 105320 96357 118080 109560 123820 129460 119870 112300 109460 111890 146250 150590 82544 66863 83489 74872 108040 100010 106590 99105 119770 110650 126630 129890 122080 116400 113530 114610 139600 142600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126320000 24428 2525 22932 45866;45867;45868 36927;36928 36928 2 9606 Homo sapiens -0.04246738953372642 SFYSTEAVQAHMNDK Unmodified 1726.7621 0.7620845 4316 Q969S3 ZNF622 Zinc finger protein 622 yes yes 0 0 0 6 0 1 47.141 47.222 3 0.087778 12708 20230619_1886_Aki_TMTPro18x_K_F6 36.127 28.213 34652 36678 41465 34440 54705 61876 47165 43293 91739 54763 63584 62769 51045 48064 51147 55726 57292 73216 32153 33542 41715 35348 55659 60081 49322 45805 89673 55084 65983 62849 52550 50473 52381 56836 54867 69297 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26029000 24429 4316 22933 45869 36929 36929 1 9606 Homo sapiens -0.07222605926995129 SGAAFGVAPALPGQVTIR Unmodified 1710.9417 0.94170385 1902 A1L020 MEX3A RNA-binding protein MEX3A yes yes 0 0 0 4 0 1 58.291 58.293 3 0.0077973 17617 20230619_1883_Aki_TMTPro18x_K_F4 63.443 46.503 120960 116460 125670 117330 154380 187760 144340 152960 179990 69781 64954 54933 64961 54024 89731 60875 68644 59672 112010 106590 127670 119400 157990 183690 147160 156360 176440 74766 72055 56509 67508 56143 89479 61096 65819 56723 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93399000 24430 1902 22934 45870 36930 36930 1 9606 Homo sapiens 0.11467066143086413 SGAEAQTPEDSPNR Unmodified 1457.6383 0.63826419 1571 A0A5F9UY30;O43493-4;O43493;O43493-5;O43493-3;O43493-7 TGOLN2 Trans-Golgi network integral membrane protein 2 yes no 0 0 0 1 0 1 30.12 30.12 2 0.00031063 6038 20230619_1880_Aki_TMTPro18x_K_F1 128.85 118.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24431 1571 22935 45871 36931 36931 1 9606 Homo sapiens -0.07224940702963067 SGAEEQGPIDGPSK Unmodified 1370.6314 0.6313879 1571 A0A5F9UY30;O43493-4;O43493;O43493-5;O43493-3;O43493-7;O43493-6 TGOLN2 Trans-Golgi network integral membrane protein 2 yes no 0 0 0 2.5 0.5 1 1 40.609 40.676 3 3.7769E-05 10108 20230619_1881_Aki_TMTPro18x_K_F2 105.19 83.633 50910 38742 53069 61440 71751 80671 67855 71616 84876 67678 79652 71463 76543 66599 74441 71245 83186 74095 47071 35657 54069 60384 72974 79864 69161 73659 85236 68769 81778 72253 78137 69103 76194 71701 79445 70378 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71092000 24432 1571 22936 45872;45873 36932 36932 1 9606 Homo sapiens -0.03910253583512713 SGAEGDDTGAPHSPQER Unmodified 1709.7241 0.72411909 3154 Q0VD96;K7EIX2;Q6AI08 HEATR6 HEAT repeat-containing protein 6 yes no 0 0 0 1 0 1 27.947 27.947 3 1.0324E-09 5145 20230619_1880_Aki_TMTPro18x_K_F1 140.22 131.83 1631.3 0 1065.3 1547.5 2382.9 2506.1 710.63 2632.1 2067.3 0 1388.4 2369.2 2390.5 1439.8 2126.6 1088.6 1742 2267.7 1494.7 0 1150.6 1443.9 2330.2 2459.5 859.89 2604.8 1995.5 0 1506.7 2266.1 2390.9 1499.6 2140 1168.9 1674.1 2139.5 1 0 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 11401000 24433 3154 22937 45874 36933 36933 1 9606 Homo sapiens -0.10235400588067023 SGAELALDYLCR Unmodified 1366.6551 0.65510023 4416 Q9BRJ6;C9JQV0;A0A024R836;H7C0T1;H7C2R9 C7orf50;MGC11257 Uncharacterized protein C7orf50 yes no 0 0 0 6.5 0.5 1 1 60.239 60.291 2;3 2.2024E-12 18239 20230619_1886_Aki_TMTPro18x_K_F6 174.23 150.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24434 4416 22938 45875;45876 36934;36935 36934 2 9606 Homo sapiens -0.013561113507194023 SGAEVEAGDAAER Unmodified 1260.5582 0.55822296 864 A0A087WZ13;E9PAU2;Q8IY67-2;Q8IY67;K7EKR9;Q8IY67-3 RAVER1 Ribonucleoprotein PTB-binding 1 yes no 0 0 0 1 0 1 33.428 33.428 2 3.8022E-21 7338 20230619_1880_Aki_TMTPro18x_K_F1 261.75 226.31 41776 22479 43728 47007 57394 62204 45089 50827 55864 49324 76754 68617 67521 66014 55108 31677 76317 67142 38561 20808 44475 45598 58209 61441 46550 52660 57077 50545 77280 68665 68671 66372 57285 34464 72751 63430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67057000 24435 864 22939 45877 36936 36936 1 9606 Homo sapiens -0.06163382306135645 SGALDVLQMK Acetyl (Protein N-term);Oxidation (M) 1118.5642 0.56415996 205 C9J9K3;A0A8V8TMX1;A0A024R2L6;A0A0C4DG17;A0A8V8TLA4;P08865;A0A8I5KQE6;Q96RS2;F8WD59;A0A8V8TMZ8 RPSA 40S ribosomal protein SA yes no 1 1 0 4.5 0.5 1 1 60.172 60.2 2 8.897E-06 18366 20230619_1883_Aki_TMTPro18x_K_F4 62.88 39.951 189360 150700 156740 200070 174820 199730 193710 183240 256500 209930 209500 250570 269910 226480 192080 341680 289240 342060 174810 138390 162490 197890 180910 201580 196070 189160 255820 212110 219990 251850 269990 240500 202900 341000 276160 324700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 236340000 24436 205 22940 45878;45879 36937;36938 36937 127 2 9606 Homo sapiens 0.009620446718372477 SGALDVLQMK Acetyl (Protein N-term) 1102.5692 0.56924534 205 C9J9K3;A0A8V8TMX1;A0A024R2L6;A0A0C4DG17;A0A8V8TLA4;P08865;A0A8I5KQE6;Q96RS2;F8WD59;A0A8V8TMZ8 RPSA 40S ribosomal protein SA yes no 1 0 0 5 0.816 1 1 1 63.374 63.407 2 1.4486E-05 19657 20230619_1886_Aki_TMTPro18x_K_F6 87.323 66.451 477690 353960 429960 465260 389910 547780 493400 529240 650810 601750 528850 750150 810760 703020 510580 991730 900660 1115100 441080 325090 440520 461740 412250 546840 496360 543790 649560 608970 561860 753170 804930 742080 548720 997150 859460 1057000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1615599999.9999998 24437 205 22940 45880;45881;45882 36939;36940 36940 2 9606 Homo sapiens 0.022063485344460787 SGALLACGIVNSGVR Unmodified 1472.7769 0.7769467 3840 Q59EG8;Q13200;B4DM22;Q9NSM5;Q13200-3;Q13200-2;Q13041 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 3.5 0.5 1 1 53.377 53.413 3 9.7974E-08 15548 20230619_1883_Aki_TMTPro18x_K_F4 130.66 117.78 202950 161630 197520 191550 186900 198160 215000 205540 218220 249950 226800 230230 292610 215120 233490 283080 254010 257070 187590 148250 200890 191160 195630 200110 215300 210660 222750 249570 235180 234150 293510 226140 239870 281780 242850 244440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 360110000 24438 3840 22942 45883;45884 36941;36942 36942 2 9606 Homo sapiens 0.05946930731647626 SGAPPPSGSAVSTAPQPK Unmodified 1634.8264 0.82639932 2119 A8K8B2;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3;A0A024RCU9 SRPK1 SRSF protein kinase 1 yes no 0 0 0 8 0 1 39.751 39.741 3 0.00023441 9287 20230619_1888_Aki_TMTPro18x_K_F8 75.911 64.649 17178 13669 14901 19048 19682 19995 16457 17012 23961 17866 22846 22883 24317 22176 14252 25930 27031 27905 15864 12559 15419 18793 19987 20080 17012 17615 23921 18183 23538 22996 24318 23089 15439 26071 25745 26480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44652000 24439 2119 22943 45885 36943 36943 1 9606 Homo sapiens 0.03437917221481257 SGAQASSTPLSPTR Unmodified 1358.679 0.6790068 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;Q8N519;A0A6Q8PF80;A0A6Q8PGH0;A0A6Q8PF59;A0A6Q8PFM1;W5X314;A0A6Q8PFF5 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 7 0.816 1 1 1 35.374 35.412 2 7.0909E-16 7765 20230619_1886_Aki_TMTPro18x_K_F6 202.32 157.3 112930 85401 88182 112790 203310 207460 188560 184860 262110 142330 168750 183980 163020 140350 175590 168070 191960 172630 104190 78433 93556 112820 201710 202060 192970 189180 258730 147640 177410 183430 167240 147640 179180 168740 183370 163990 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1029799999.9999999 24440 1428 22944 45886;45887;45888 36944;36945;36946 36944 3 9606 Homo sapiens 0.014014454073276283 SGASEANLIVAK Unmodified 1158.6245 0.62445203 3588 P46013;P46013-2;Q70L73 MKI67 Antigen KI-67 yes no 0 0 0 6 0 1 48.502 48.581 2 6.9083E-12 13276 20230619_1886_Aki_TMTPro18x_K_F6 169.99 128.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24441 3588 22945 45889 36947 36947 1 9606 Homo sapiens 0.05148478326577788 SGASVVAIR Unmodified 858.49232 0.49231565 4054 Q5SSJ5;Q5SSJ5-2;B0QZK4;Q5SWC8;Q5SSJ5-3 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 5.33 3.09 1 1 1 38.746 38.762 2 0.00047567 9508 20230619_1880_Aki_TMTPro18x_K_F1 134.48 66.498 369670 301780 337370 352790 432770 433650 445810 460930 530160 388420 451860 478320 462790 422300 454690 425430 551820 484960 341570 276730 346920 353270 442140 433110 451250 466950 531720 399390 468020 479590 471940 437520 467640 430960 526570 460230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 625180000 24442 4054 22946 45890;45891;45892 36948;36949;36950 36948 3 9606 Homo sapiens 0.05740918100275394 SGAVEETFR Unmodified 994.47197 0.47197413 129 B2R923;A0A024R159;Q6YN16-2;Q6YN16;B4DWC7;B4E136 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes no 0 0 0 2.5 0.5 1 1 39.786 39.849 2 0.0023619 9473 20230619_1882_Aki_TMTPro18x_K_F3 107.15 53.988 101210 81068 85566 87313 137150 141300 136010 142570 174660 97711 119610 130770 114710 104030 129590 116930 133300 123200 93457 74289 89024 88418 138360 138830 138290 144280 173270 102280 125210 130370 118020 108820 131640 117700 127430 116980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 249160000 24443 129 22947 45893;45894 36951;36952 36952 2 9606 Homo sapiens -0.025482973501880224 SGAYLIPLLER Unmodified 1230.6972 0.69722304 2256 P26196;B2R858;Q8IV96 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 0 1.5 0.5 1 1 62.209 62.214 2 0.00084849 19385 20230619_1880_Aki_TMTPro18x_K_F1 107.83 85.594 351110 287430 350270 355480 272150 347460 318170 321680 380720 436220 416320 405840 465770 402340 375020 497480 439030 470240 324650 263720 354750 353340 290560 351310 320310 333520 386080 433790 427470 413360 469550 420160 387170 496510 419660 446810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290340000 24444 2256 22948 45895;45896 36953;36954 36953 2 9606 Homo sapiens 0.09110232119974171 SGCENPPIVSK Unmodified 1186.5652 0.56522259 2499 B4DJ39;O94842-3;O94842-2;O94842;A0A669KB71 TOX4 TOX high mobility group box family member 4 yes no 0 0 0 6 0 1 42.51 42.605 2 0.0054494 10597 20230619_1886_Aki_TMTPro18x_K_F6 88.681 65.124 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24445 2499 22949 45897 36955 36955 1 9606 Homo sapiens -0.020597409592710392 SGCIPENHGEDMRK Oxidation (M) 1644.6984 0.69843839 693 A0A024RBS6;F5H1S9;G8JLB3;E5KMT6;E5KMT5;Q9Y606-2;Q9Y606;F5GXL3;F5H168;F5GY32;F8W9U5;F5H1B2 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial yes no 0 1 1 3.5 0.5 1 1 30.727 30.802 4 0.0028748 5904 20230619_1882_Aki_TMTPro18x_K_F3 73.722 53.137 28922 27471 31128 27998 34811 38433 37461 36511 42468 35204 49747 39249 43930 39052 38823 42360 51722 43588 26787 25147 31478 28393 35933 38039 37776 37389 43217 35793 50363 39714 44797 40457 40295 42578 49306 41417 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38001000 24446 693 22950 45898;45899 36956;36957 36956 423 2 9606 Homo sapiens -0.09812289635760862 SGCTSLTPGPNCDR Unmodified 1520.6348 0.6347755 4623 Q9NXR7-4;Q9NXR7-3;Q9NXR7;Q9NXR7-1;C9J2G0;A0A075B7D2;F8W733 BRE BRCA1-A complex subunit BRE yes no 0 0 0 4.33 0.471 2 1 36.242 36.311 2 1.2209E-08 8053 20230619_1883_Aki_TMTPro18x_K_F4 150.09 134.2 12827 10234 11734 11742 11947 14872 12807 12730 15256 10010 12360 12994 11348 12144 9008.1 13490 16012 10610 11851 9383.6 12016 11777 12435 14749 12939 13082 15266 10366 12774 13034 11530 12606 9610.3 13363 15215 10128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41966000 24447 4623 22951 45900;45901;45902 36958;36959 36958 2 9606 Homo sapiens -0.10471650072827288 SGDAAIVDMVPGK Oxidation (M) 1274.6177 0.61765209 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;B4DNE0;Q8IUB0;Q9H2I7;A0A4D5RA52;A0A087WV01;Q504Z0;Q53HR1;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q16577;Q6P082;A0A4D5RBD4;A0A4D5RBH1;A0A4D5RAB6;Q2F837;Q96EB3;A0A4D5RBE6;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 1 0 4.67 0.471 1 2 49.16 49.217 3 0.00066239 13677 20230619_1883_Aki_TMTPro18x_K_F4 87.216 70.684 452750 326300 339320 414770 391200 457010 437740 416700 543170 563180 516570 678920 848370 728230 427320 1193600 960750 1208400 417460 299620 355410 412030 404130 457950 441780 432530 546960 565090 546370 686470 836100 774150 475720 1190100 915800 1146600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 765990000 24448 1560;3997 22952 45903;45904;45905 36960;36961;36962;36963 36961 1025 4 9606 Homo sapiens -0.008672026163367264 SGDAAIVDMVPGK Unmodified 1258.6227 0.62273747 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;B4DNE0;Q8IUB0;Q9H2I7;A0A4D5RA52;A0A087WV01;Q504Z0;Q53HR1;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q16577;Q6P082;A0A4D5RBD4;A0A4D5RBH1;A0A4D5RAB6;Q2F837;Q96EB3;A0A4D5RBE6;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 5 0.816 1 1 1 55.658 55.708 3 1.48E-06 16293 20230619_1886_Aki_TMTPro18x_K_F6 140.14 123.12 399550 272240 314650 372330 270230 409960 350020 332080 505350 481490 425700 503150 714540 637540 306690 1067400 880010 1149000 368420 250240 326510 368070 287750 409570 353000 348740 503200 479760 453110 515450 701750 676050 355000 1067600 838300 1089500 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1045999999.9999999 24449 1560;3997 22952 45906;45907;45908 36964;36965;36966;36967 36966 4 9606 Homo sapiens 0.003771012462721046 SGDAAIVDMVPGKPMCVESFSDYPPLGR 2 Oxidation (M) 3026.3824 0.38237913 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;B4DNE0;Q8IUB0;A0A4D5RA52;Q504Z0;Q53HR1;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q6P082;A0A4D5RBD4;A0A4D5RBH1;A0A4D5RAB6;Q2F837;Q96EB3;A0A4D5RBE6;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 2 1 6.75 0.829 2 1 1 59.153 59.208 3;4 4.4485E-10 17547 20230619_1887_Aki_TMTPro18x_K_F7 119.32 115.63 214390 182690 196660 232560 239350 187480 226940 196430 195650 233580 259980 212590 252350 191060 217230 276880 205350 213030 198160 167640 202000 230140 244220 193460 228600 201240 203840 233330 263060 216330 255880 202360 221210 273120 196650 202990 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 872620000 24450 1560;3997 22953 45909;45910;45911;45912 36968;36969;36970;36971;36972;36973 36971 1024;1025 6 9606 Homo sapiens -0.049756764100493456 SGDAAIVDMVPGKPMCVESFSDYPPLGR Oxidation (M) 3010.3875 0.38746451 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;B4DNE0;Q8IUB0;A0A4D5RA52;Q504Z0;Q53HR1;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q6P082;A0A4D5RBD4;A0A4D5RBH1;A0A4D5RAB6;Q2F837;Q96EB3;A0A4D5RBE6;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 1 1 6.71 1.03 1 2 2 2 61.379 61.421 3;4 1.4921000000000002E-20 18653 20230619_1886_Aki_TMTPro18x_K_F6 165.87 154.99 837050 748870 871860 922920 734680 726960 784610 848040 767900 1078500 1028300 922600 1043900 802890 981870 1048700 871790 915470 774710 686840 880770 915440 774360 753200 788670 864200 795120 1072000 1042800 939820 1061000 845510 993860 1042400 835490 870770 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 5200300000 24451 1560;3997 22953 45913;45914;45915;45916;45917;45918;45919 36974;36975;36976;36977;36978 36974 1024;1025 5 9606 Homo sapiens -0.03731372547417777 SGDAAIVDMVPGKPMCVESFSDYPPLGR Unmodified 2994.3925 0.39254989 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;B4DNE0;Q8IUB0;A0A4D5RA52;Q504Z0;Q53HR1;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q6P082;A0A4D5RBD4;A0A4D5RBH1;A0A4D5RAB6;Q2F837;Q96EB3;A0A4D5RBE6;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 1 7.5 0.5 2 2 62.36 62.39 3;4 1.1775E-38 18862 20230619_1887_Aki_TMTPro18x_K_F7 196.49 184.86 1641500 1090100 1435800 1363100 925310 1309400 1519800 1454000 1470000 1930400 1602300 1499500 2202800 1613000 1295100 1930200 1841900 1604800 1514400 1001200 1467900 1354100 1019800 1330800 1496900 1488100 1508400 1911500 1662400 1545800 2184500 1678100 1366500 1914700 1755400 1528600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 23037000000 24452 1560;3997 22953 45920;45921;45922;45923 36979;36980;36981 36979 3 9606 Homo sapiens -0.024870686848316836 SGDAAIVEMVPGKPMCVESFSQYPPLGR Oxidation (M) 3037.4347 0.43474905 1378 Q05639;A0A2U3TZH3 EEF1A2 Elongation factor 1-alpha 2 yes no 0 1 1 4.5 3.5 1 1 61.111 61.128 4 4.5943E-20 18102 20230619_1888_Aki_TMTPro18x_K_F8 157.31 150.12 70225 61932 76235 75081 38282 38837 61804 57019 57640 90958 87332 80015 87443 72854 82584 87329 78706 74245 65013 56795 76350 74315 43329 42483 60906 57962 60258 89691 88170 81475 88970 76151 83874 86794 75312 70673 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 234620000 24453 1378 22954 45924;45925 36982;36983 36983 864;865 2 9606 Homo sapiens -0.002470932763571909 SGDAAIVEMVPGKPMCVESFSQYPPLGR 2 Oxidation (M) 3053.4297 0.42966367 1378 Q05639;A0A2U3TZH3 EEF1A2 Elongation factor 1-alpha 2 yes no 0 2 1 7.5 0.5 1 1 58.232 58.282 4 4.0451E-09 17114 20230619_1888_Aki_TMTPro18x_K_F8 102.95 95.303 24350 22308 22903 26370 15861 13337 20489 18968 18259 24268 28524 27647 24087 18455 27104 26249 24816 23790 22521 20450 23292 26135 17118 14628 20344 19160 19146 24317 28591 27604 24845 19753 27378 26119 23759 22625 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 316850000 24454 1378 22954 45926;45927 36984 36984 864;865 1 9606 Homo sapiens -0.014913971389887593 SGDAAIVEMVPGKPMCVESFSQYPPLGR Unmodified 3021.4398 0.43983443 1378 Q05639;A0A2U3TZH3 EEF1A2 Elongation factor 1-alpha 2 yes no 0 0 1 8 0 1 62.091 62.119 4 1.7494E-13 18684 20230619_1888_Aki_TMTPro18x_K_F8 124.28 118.31 167730 144740 171230 165490 91872 110270 141850 141870 125820 202630 182500 172680 204950 191250 210340 199260 186800 202110 155170 132670 172410 164820 103040 116480 139840 144430 131680 200470 185580 177270 208760 197070 212430 200340 179060 191880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 264340000 24455 1378 22954 45928 36985;36986 36985 2 9606 Homo sapiens 0.009972105862289027 SGDEEFKGEDELCDSGR Unmodified 1928.7694 0.7694143 1694 Q9UG73;A0A7P0T893;Q8NE02;O43823;B7Z8L8;M0QX51;A0A7P0TBC8 DKFZp586B1222;AKAP8 A-kinase anchor protein 8 yes no 0 0 1 1 0 1 44.497 44.497 3 2.8487E-14 12084 20230619_1880_Aki_TMTPro18x_K_F1 168.05 159.45 57772 40720 48407 51200 38989 44585 54396 49584 55737 61936 60014 56527 68251 52561 59837 76473 64767 59692 53303 37389 49831 50770 41683 45703 54000 50663 56910 61754 61713 57540 68961 55617 61358 75476 61886 56892 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34799000 24456 1694 22955 45929 36987 36987 1 9606 Homo sapiens -0.15781962907885827 SGDETPGSEVPGDK Unmodified 1373.5947 0.59466805 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 1.33 0.471 2 1 40.304 40.341 3 5.2853E-05 9981 20230619_1881_Aki_TMTPro18x_K_F2 98.531 82.641 98143 69893 81586 103150 134170 144590 101260 118690 144560 113630 150570 173050 138540 122190 137980 119050 196900 166670 90550 64287 85161 101880 134420 142430 105360 122870 144950 116970 153820 171150 141850 127560 143440 122420 187610 157910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 369640000 24457 3957 22956 45930;45931;45932 36988;36989 36989 2 9606 Homo sapiens -0.0771855020007024 SGDFQGADRPGPEEK Unmodified 1588.7118 0.71176349 2333 B4DYK9;B7ZMH1;B2RWN6;F5H1N7;B7ZVZ4;A0A2R8Y6P1;Q6ZU35 KIAA1211 Uncharacterized protein KIAA1211 yes no 0 0 1 2.33 0.471 2 1 38.062 38.12 3 0.00014457 8838 20230619_1882_Aki_TMTPro18x_K_F3 95.197 80.201 50719 33340 42750 41564 38276 46870 41424 37697 47542 57458 73861 77594 74327 63629 54632 77296 93576 90086 46780 30620 44014 41370 40263 46777 41805 39700 49149 57613 74556 77392 74941 66822 58171 78097 89132 85441 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177950000 24458 2333 22957 45933;45934;45935 36990;36991 36991 2 9606 Homo sapiens -0.05904392260458735 SGDGEGTPVEHVR Unmodified 1338.6164 0.61640654 4154 Q7L576;X5D2F4;A0A087WVZ5;B3KWV6;Q7L576-2;B3KWT5;Q7L576-3 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 2 0.816 1 1 1 29.867 29.921 3 2.3515E-28 5943 20230619_1880_Aki_TMTPro18x_K_F1 214 194.87 39260 22436 35094 42263 48960 44040 43580 44170 52942 51943 54065 60798 57283 43165 41406 54188 60025 65925 36202 20726 36235 41034 49557 44398 44539 45328 53470 52336 55580 60686 57585 45730 43483 54890 57292 62470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 207280000 24459 4154 22959 45936;45937;45938 36992;36993;36994 36992 3 9606 Homo sapiens -0.03935700660872499 SGDLFNCGSLTIR Unmodified 1438.6875 0.68746299 1054 B7ZB80;B4E2N3;A0A140VKB3;A0A0K2GN21;P21953;P21953-2 BCKDHB 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial yes no 0 0 0 4.5 3.5 1 1 55.769 55.769 2 2.4804E-12 16064 20230619_1888_Aki_TMTPro18x_K_F8 168.98 138.41 21766 18939 18569 22134 18621 23701 23741 24433 20794 22194 24479 24204 28531 25299 23027 26516 25755 24336 20110 17363 19158 22113 19496 23858 23556 24850 21504 22607 25118 24530 28734 26115 23681 26500 24606 23143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68907000 24460 1054 22961 45939;45940 36995;36996 36996 2 9606 Homo sapiens -0.014333239477082316 SGDLYVLAADK Unmodified 1150.587 0.58700389 2081 A8K5W7;Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 0 5 0 1 55.842 55.906 3 0.029914 16223 20230619_1885_Aki_TMTPro18x_K_F5 53.967 35.699 69823 59511 67701 74741 73439 82051 79853 85028 91399 74703 74004 78825 84102 73887 79433 99624 87496 88767 64564 54601 69084 74326 76019 82474 80503 86368 91739 76201 77235 79719 85330 77710 81413 99032 83646 84421 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54160000 24461 2081 22962 45941 36997 36997 1 9606 Homo sapiens 0.01773387060939058 SGDNLAEENSRDENR Unmodified 1704.7299 0.72993275 4515 Q9H4L5-2;Q9H4L5;Q9H4L5-6;Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 yes no 0 0 1 1 0 1 29.304 29.304 3 4.710599999999999E-19 5713 20230619_1880_Aki_TMTPro18x_K_F1 211.75 200.15 26870 16766 23960 14533 33231 30513 18706 20176 27563 33717 33045 31771 49686 32817 28660 26948 40880 32164 24787 15355 24645 15096 33375 29438 19999 21660 27867 33301 34337 32350 49118 33565 30169 27480 38935 30526 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54437000 24462 4515 22963 45942 36998 36998 1 9606 Homo sapiens -0.09424302076445201 SGDPRPQAAEPPDHLTITR Unmodified 2057.029 0.029015303 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B3KME6;Q6AZE1;H0Y4T4;E7EMW0;E7EWM2;Q96L14;E5RG47 CEP170;CEP170P1 Centrosomal protein of 170 kDa;Cep170-like protein yes no 0 0 1 4.5 0.5 1 1 38.042 38.11 4 4.403E-05 8759 20230619_1883_Aki_TMTPro18x_K_F4 94.201 81.082 62722 51481 58123 71432 68912 80745 66072 63920 71237 70287 74511 78461 74755 62849 69841 77099 86568 99195 57963 47291 59671 70569 70699 80531 66951 66660 72430 70950 76336 78742 76066 66139 72072 78451 82753 93935 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91147000 24463 1960 22964 45943;45944 36999;37000 36999 2 9606 Homo sapiens 0.04278195556071296 SGDSEVYQLGDVSQK Unmodified 1610.7424 0.74239491 1034 A0A0G2JLD8;E7EUY5;Q567R6;A4D1U3;B7Z268;Q04837;C9K0U8 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial yes no 0 0 0 3 0.816 1 1 1 50.852 50.904 3 1.5463E-10 14521 20230619_1882_Aki_TMTPro18x_K_F3 150.81 136.55 704410 523790 643410 684280 633620 1204800 677840 695270 1895200 912720 849440 888220 1007400 932720 774660 1154800 1138600 1077600 650520 481030 659370 684010 667020 1165600 717320 750900 1816900 913400 927060 904580 1013600 972010 813970 1151400 1085400 1024500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 997470000 24464 1034 22965 45945;45946;45947 37001;37002 37002 2 9606 Homo sapiens -0.03854658666114119 SGDTPITVR Unmodified 944.49271 0.49270958 1841 S4R3N9;A0A8V8TP06;B4DRS6;Q9BWM7 SFXN3 Sideroflexin;Sideroflexin-3 yes no 0 0 0 4 0 1 37.246 37.29 2 7.6954E-06 8444 20230619_1883_Aki_TMTPro18x_K_F4 133.12 72.228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24465 1841 22966 45948 37003 37003 1 9606 Homo sapiens 0.018242930294718462 SGDWVCPNPSCGNMNFAR Oxidation (M) 2083.8299 0.82986326 4307 Q92804-2;Q92804;B4E312;A0A0J9YYE0;A0A0J9YXY8 TAF15 TATA-binding protein-associated factor 2N yes no 0 1 0 7.5 0.5 1 1 48.72 48.796 3 0.00015132 13005 20230619_1888_Aki_TMTPro18x_K_F8 79.326 78.84 60353 52601 54291 60517 68854 68080 67189 59245 77526 78114 68351 77625 86331 61333 73081 83239 78501 89412 55784 48216 55903 60565 70283 68108 68131 61664 78101 77925 71410 78230 86834 65035 74904 83603 75132 84818 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259890000 24466 4307 22967 45949;45950 37004;37005 37005 2723 2 9606 Homo sapiens -0.1686984733009922 SGEATDGARPQALPEPMQESK Oxidation (M) 2214.0223 0.022274945 3428 P10645 CHGA Chromogranin-A;Vasostatin-1;Vasostatin-2;EA-92;ES-43;Pancreastatin;SS-18;WA-8;WE-14;LF-19;Catestatin;AL-11;GV-19;GR-44;ER-37;GE-25;Serpinin-RRG;Serpinin;p-Glu serpinin precursor yes yes 0 1 1 3 0 1 39.993 40.05 3 9.0809E-08 9617 20230619_1882_Aki_TMTPro18x_K_F3 105.5 97.509 29690 30366 32555 63978 36408 25172 46674 47292 41645 53556 49468 35729 43242 40737 36588 46579 42125 36211 27518 28037 33070 61249 37630 28901 46311 47001 43071 53203 50016 37289 44039 42150 37684 46112 40210 34524 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42397000 24467 3428 22968 45951 37006 37006 2048 1 9606 Homo sapiens -0.036175301774164836 SGEATDGARPQALPEPMQESK Unmodified 2198.0274 0.027360323 3428 P10645 CHGA Chromogranin-A;Vasostatin-1;Vasostatin-2;EA-92;ES-43;Pancreastatin;SS-18;WA-8;WE-14;LF-19;Catestatin;AL-11;GV-19;GR-44;ER-37;GE-25;Serpinin-RRG;Serpinin;p-Glu serpinin precursor yes yes 0 0 1 3.5 0.5 1 1 43.722 43.779 3 1.3077E-11 11173 20230619_1883_Aki_TMTPro18x_K_F4 134.96 127.97 132640 119990 147430 259790 116860 105950 194220 180980 179680 224920 201000 175530 214270 168800 130830 203890 193650 169620 122840 110880 148760 248490 125540 120400 190870 181140 184910 223290 205530 180230 214240 176260 138370 202210 184510 161550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 159650000 24468 3428 22968 45952;45953 37007;37008;37009 37008 3 9606 Homo sapiens -0.0237322631483039 SGEDEQQEQTIAEDLVVTK Acetyl (Protein N-term) 2160.007 0.007002036 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;F8VR77 PA2G4 Proliferation-associated protein 2G4 yes no 1 0 0 1 0 1 62.908 62.908 3 1.0016999999999999E-19 19649 20230619_1880_Aki_TMTPro18x_K_F1 48.376 31.02 172900 142750 147500 174220 155480 173990 164890 168350 188460 194850 185240 191410 221290 178590 192920 218070 198290 214490 159690 130950 152220 173340 161230 175850 166470 173110 190660 195400 191830 194040 223290 186780 197110 218240 189780 203700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1209800000 24469 654 22969 45954 37010 37010 1 9606 Homo sapiens -0.02660118493668051 SGEEDFESLASQFSDCSSAK Unmodified 2179.8852 0.88517234 3855 Q13526;K7EN45;K7EMU7;B3KUM4 PIN1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 yes no 0 0 0 2.75 0.829 2 1 1 62.033 62.048 3 2.9035999999999996E-22 19256 20230619_1882_Aki_TMTPro18x_K_F3 171.29 163.48 96030 76318 86617 79771 69056 69581 87261 78264 86413 107870 116770 100600 117150 101480 91408 123400 127390 108050 88709 69920 88453 80225 73557 71405 86947 80181 89357 107180 118260 102570 118360 105790 95558 122710 121400 102860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 419390000 24470 3855 22970 45955;45956;45957;45958 37011;37012 37012 2 9606 Homo sapiens -0.15757483847664844 SGEENPASKPTPVQDVQGDGR Acetyl (Protein N-term) 2209.0247 0.024717786 99 A0A024R0L6;Q15102;M0R389;M0QZT2;M0QXS6;M0R323 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma yes no 1 0 1 1.5 0.5 1 1 42.633 42.672 3 1.2433E-22 11232 20230619_1880_Aki_TMTPro18x_K_F1 115.42 101.31 77423 63619 72923 80470 75900 84654 85305 70653 87700 92210 105810 107780 98804 91834 97110 105990 112810 116360 71559 58383 74547 79917 78858 84971 85530 73794 89931 92519 107420 108170 101040 95974 99695 106840 107810 110390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 451780000 24471 99 22971 45959;45960 37013;37014 37013 2 9606 Homo sapiens -0.03143358448187428 SGEERQDYSEECGR Unmodified 1700.6696 0.66964068 722 A0A1U9X8D3;A0A1U9X8D1;A0A1U9X8C7;A0A1U9X8C1;A0A0G2JHC2;A0A024RCJ8;Q6NYC8;Q6NYC8-2 hCG_1821276;PPP1R18 Phostensin yes no 0 0 1 1 0 1 28.589 28.589 3 7.0401E-05 5429 20230619_1880_Aki_TMTPro18x_K_F1 98.942 94.051 3264.9 2106.4 2707.1 2622.7 5505.8 4376.6 4726.4 4915 4407.5 2740.2 5254.4 3040.3 4222.3 3470.3 2817.7 3066.8 5032.7 3914 3010.7 1934.7 2836.8 2630.5 5462.4 4307.9 4799.5 4922.2 4532.3 2897.4 5288.5 3099.1 4275.7 3546.3 3012.9 3135.4 4786.1 3712.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3740600 24472 722 22972 45961 37015 37015 1 9606 Homo sapiens -0.15266735731165681 SGEGEVSGLMR Oxidation (M) 1136.5132 0.51318702 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 1 0 2 0 1 35.874 35.931 2 0.0019763 8030 20230619_1881_Aki_TMTPro18x_K_F2 93.448 84.065 96786 79085 85452 90977 115480 116710 114250 109970 139570 121400 146850 139210 121190 110920 118440 130200 146000 140090 89408 72510 88230 91254 117510 115950 116010 113100 140950 122650 149130 139590 124450 116330 122070 131050 139380 132980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154710000 24473 2263 22973 45962 37016 37016 1410 1 9606 Homo sapiens -0.0496090437300154 SGEGEVSGLMR Unmodified 1120.5183 0.5182724 2263 B2R8R5;Q13263;Q13263-2;M0R0K9 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 2.5 0.5 1 1 42.531 42.604 2 8.0487E-09 10737 20230619_1882_Aki_TMTPro18x_K_F3 185.6 152.76 671560 555670 607450 640490 565240 719360 800260 708480 880360 823940 885800 904880 978820 803600 786980 922090 1006800 964960 620530 509450 622240 641060 597620 721050 795420 727860 892270 829150 912620 911500 986900 838710 816460 926760 960900 916230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 483740000 24474 2263 22973 45963;45964 37017;37018 37018 2 9606 Homo sapiens -0.03716600510392709 SGEGIREPISVK Unmodified 1270.6881 0.68811492 1781 Q6NUN2;A3F769;A3F768;A0A8I5KX72;O15226;O15226-2;A2I829 NKRF;NRF NF-kappa-B-repressing factor yes no 0 0 1 6.5 0.5 1 1 42.039 42.124 3 0.00020458 10362 20230619_1886_Aki_TMTPro18x_K_F6 104.41 71.41 126460 101730 107800 112450 126270 147150 128640 124550 159120 142770 141990 134910 165580 125640 137930 166460 151510 140350 116780 93247 111370 113160 129910 145660 130480 129270 159710 143150 147450 137070 166840 132100 141650 165080 144750 133620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 224410000 24475 1781 22974 45965;45966 37019;37020 37019 2 9606 Homo sapiens 0.06359838763637526 SGEIVQEYDR Unmodified 1194.5517 0.55168102 3280 Q59H56;Q5SRN1;Q53H60;O60508 CDC40 Pre-mRNA-processing factor 17 yes no 0 0 0 1 0 1 41.353 41.353 2 0.010482 10703 20230619_1880_Aki_TMTPro18x_K_F1 89.171 62.573 42825 35022 40826 48459 60701 66314 53911 58618 58448 55633 64038 59972 57667 56288 62888 57242 77182 66645 39584 32171 41986 48039 61294 65508 54899 60307 59507 56526 65150 60579 59371 58217 64608 58059 73636 63239 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47733000 24476 3280 22975 45967 37021 37021 1 9606 Homo sapiens -0.03781275466849365 SGELAQEYDK Unmodified 1138.5142 0.51423288 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;Q6MZR8;A8K7A6;Q68EN4;Q5H934;Q7Z4C6 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 2.67 0.471 1 2 43.696 43.77 2;3 0.00029922 11262 20230619_1882_Aki_TMTPro18x_K_F3 132.78 83.983 199060 158550 199180 204970 203930 205830 221420 214130 261390 233050 274160 271140 266680 230150 248490 248610 282500 264490 184030 145550 202410 203220 211800 208310 223510 218750 264400 235710 280330 272140 271580 239720 254860 250460 269840 251110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 286260000 24477 1432 22976 45968;45969;45970 37022;37023 37023 2 9606 Homo sapiens -0.04948366732469367 SGELEQEEER Unmodified 1204.5208 0.52077482 3428 P10645;G5E968;Q86T07 CHGA Chromogranin-A;Vasostatin-1;Vasostatin-2;EA-92;ES-43;Pancreastatin;SS-18;WA-8;WE-14;LF-19;Catestatin;AL-11;GV-19;GR-44;ER-37;GE-25;Serpinin-RRG;Serpinin;p-Glu serpinin precursor yes no 0 0 0 1 0 1 34.138 34.138 2 9.0023E-14 7639 20230619_1880_Aki_TMTPro18x_K_F1 232.63 186.19 168580 108850 207120 377620 191680 149120 297570 302170 276350 272010 330260 252790 309540 258130 177770 136610 322920 246510 155970 101790 208000 355590 202380 171300 293240 297650 284670 275760 334680 257650 310330 259930 190810 145600 307030 233260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206430000 24478 3428 22977 45971 37024 37024 1 9606 Homo sapiens -0.07330473571755647 SGELPPNINIK Acetyl (Protein N-term) 1222.6558 0.65575216 4537 Q9H9B4;D6RDG7;S4R2X2;D6RFI0;D6RAE9 SFXN1 Sideroflexin-1 yes no 1 0 0 5 0 2 59.022 59.076 2 0.0035102 17497 20230619_1885_Aki_TMTPro18x_K_F5 60.973 39.576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24479 4537 22978 45972;45973 37025;37026 37025 2 9606 Homo sapiens 0.05333051360639729 SGEPGQTSVAPPPEEVEPGSGVR Acetyl (Protein N-term) 2304.087 0.086983691 3139 J3KTI2;Q9BRT3 MIEN1 Migration and invasion enhancer 1 yes no 1 0 0 1 0 1 48.051 48.051 3 7.3624E-13 13549 20230619_1880_Aki_TMTPro18x_K_F1 106.03 98.045 7234.9 8821.4 8474.9 8972.3 8593.4 8577.6 11339 10825 9862.5 12491 13997 13613 15114 12068 13788 12093 16929 16886 6719.9 8069.1 8512.5 9051.6 8972.1 8762.7 11230 10949 10304 12559 14215 13714 15322 12513 14207 12425 16167 15988 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56066000 24480 3139 22979 45974 37027 37027 1 9606 Homo sapiens -0.012896320998152078 SGEPQTFTLK Unmodified 1106.5608 0.56078914 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348;A0A7I2V5T3;A0A7I2V5Z8;E7EQW5;E9PLR6;Q5T3E6 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 0 6.5 0.5 1 1 48.976 49.054 2 4.1595E-07 13126 20230619_1887_Aki_TMTPro18x_K_F7 166.97 88.637 38092 28899 34303 38897 37891 42083 40473 42913 49959 49805 52834 54082 55357 43823 43295 53903 59171 52720 35178 26546 35244 38494 39167 42325 40959 43959 50481 50089 54174 54357 55835 46086 45169 53911 56416 50110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15662000 24481 1647 22980 45975;45976 37028;37029 37029 2 9606 Homo sapiens 0.011771178894605328 SGERPVTAGEEDEQVPDSIDAR Unmodified 2356.0779 0.077875568 4724 Q9Y3D0;H3BNV7 FAM96B Mitotic spindle-associated MMXD complex subunit MIP18 yes no 0 0 1 1 0 1 41.011 41.011 3 5.0971000000000004E-31 10516 20230619_1880_Aki_TMTPro18x_K_F1 213.46 176.03 50974 43716 42528 49305 44777 51770 50136 46168 48594 58521 57491 57067 68176 50645 63113 64489 55579 53978 47084 40067 43982 49368 46503 52046 50197 47901 50009 58422 59045 57787 68931 53205 63858 64000 53239 51386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223350000 24482 4724 22981 45977 37030 37030 1 9606 Homo sapiens -0.04592025456122428 SGESQVLFETEISRK Unmodified 1708.8632 0.86317875 1236 B3KY30;Q53FK2;A0A140VK72;P48723 HSPA13 Heat shock 70 kDa protein 13 yes no 0 0 1 5.5 0.5 1 1 50.674 50.75 3 2.1705E-05 14080 20230619_1885_Aki_TMTPro18x_K_F5 106.19 87.117 66419 56926 58623 65835 58308 63334 60032 71831 74867 81732 89214 99591 90688 80195 61085 119130 114140 120610 61374 52187 60229 65743 60673 64446 60946 73038 76034 82574 90941 99673 91184 85395 65890 118970 108740 114520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74014000 24483 1236 22982 45978;45979 37031 37031 1 9606 Homo sapiens 0.03710169047371892 SGETEDTFIADLVVGLCTGQIK Unmodified 2352.1519 0.15189213 293;3418;3448 Q6FHV6;P09104;P09104-2;F5H0C8;Q9NPL4;A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2;A4QMW8;P13929-3;P13929-2;P13929;D3DTL4 ENO2;ENO1;ENO3 Gamma-enolase;Enolase;Alpha-enolase;Beta-enolase no no 0 0 0 6 0.707 1 2 1 68.678 68.722 3 1.3002E-13 20834 20230619_1887_Aki_TMTPro18x_K_F7 145.05 133.31 19514 13220 11973 20592 14990 14405 17962 17522 17290 18519 22499 18596 19956 19486 19276 18393 18844 23808 17967 12170 12886 20090 15409 14999 17860 17726 17796 18661 22703 18829 20426 20013 19587 18705 18046 22537 5 5 5 5 5 4 4 5 4 5 5 4 5 5 5 4 4 5 127400000 24484 3418;293;3448 22983 45980;45981;45982;45983 37032;37033;37034;37035;37036 37036 5 9606 Homo sapiens 0.02990226381825778 SGETWDSK Unmodified 908.38758 0.3875758 2654 B4E357;Q5JPB8;Q53HL4;Q53GT4;G3V1D3;G3V180;Q9NY33-4;Q9NY33 DKFZp686O1117;DPP3 Dipeptidyl peptidase 3 yes no 0 0 0 3 0 1 41.747 41.809 2 0.011255 10367 20230619_1882_Aki_TMTPro18x_K_F3 92.062 51.033 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24485 2654 22984 45984 37037 37037 1 9606 Homo sapiens -0.0702824816694374 SGEVLVNVK Unmodified 943.53385 0.53384611 1678 Q13347;A0A7I2YQF8;Q5U0F4;Q53HU7;A0A7I2V613;A0A7I2V607;A0A7I2V3N2;A0A7I2V2M3;A0A7I2V640;A0A7I2YQI2;A0A7I2V3U3;A0A7I2YQU2;A0A7P0MRT9;A0A7I2V685;A0A7I2YQI6;Q5TFK1;A0A7I2YQC8;A0A7I2YQT9;A0A7I2V4S8;A0A7I2V3K6 EIF3I Eukaryotic translation initiation factor 3 subunit I yes no 0 0 0 6.2 0.748 1 2 2 47.791 47.874 2;3 0.00094284 12971 20230619_1886_Aki_TMTPro18x_K_F6 98.033 77.704 274510 235090 243250 282840 276850 311590 292310 260560 386020 313920 336540 326730 346830 278690 284060 371790 377730 344000 253670 215600 250460 282030 285600 311760 296580 271290 385760 315020 347900 329620 350680 294010 295600 370300 360270 327150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 827440000 24486 1678 22985 45985;45986;45987;45988;45989 37038;37039;37040 37038 3 9606 Homo sapiens 0.059820540689429436 SGFDDPGIFYSDSFGGDAQADEGQAR Acetyl (Protein N-term) 2750.1368 0.13684701 2188 B1AHB0;P33992;Q53FG5;A8K521;B1AHB1;B3KVF0;B1AHA9;F8WFD7 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 1 0 0 1.5 0.5 1 1 64.799 64.803 3 1.2397999999999999E-38 20448 20230619_1880_Aki_TMTPro18x_K_F1 144.22 141.42 3777.9 2450.3 4626.6 5755.5 4283.1 6852.2 4457 4760.7 6554.1 10165 9266.9 10697 13387 9304.8 8293.3 9008.5 11678 12508 3486.4 2258.7 4633.2 5544.7 4499.4 6787.1 4368.1 5151.7 6687.2 9996.6 9563.3 10773 13276 9644.7 8712.6 9251.2 11146 11840 2 2 3 3 3 3 2 3 3 3 3 3 3 3 3 3 3 3 60211000 24487 2188 22986 45990;45991 37041;37042;37043 37042 3 9606 Homo sapiens -0.16821593952499825 SGFEGMFTK Unmodified 1002.4481 0.44806757 3613 P49792;A0A8V8TLN4;A0A8V8TMN6 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 1 0 1 56.564 56.564 2 0.0033605 17104 20230619_1880_Aki_TMTPro18x_K_F1 109.29 75.74 104560 81575 87840 104000 82490 107660 91324 89867 100330 105820 100620 111100 135020 94827 110320 121970 118010 124030 96531 74881 90649 103190 86527 108140 91876 93503 101810 106250 104790 111980 135400 99886 113100 122210 112880 117760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83219000 24488 3613 22987 45992 37044 37044 1 9606 Homo sapiens -0.053058541082123156 SGFEGMFTK Oxidation (M) 1018.443 0.44298219 3613 P49792;A0A8V8TLN4;A0A8V8TMN6 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 1 0 7 0 1 48.648 48.735 2 0.0032644 13013 20230619_1887_Aki_TMTPro18x_K_F7 95.502 53.61 62870 54741 64216 74983 83485 80772 81236 74712 85210 77973 91462 81952 84252 71253 81475 98208 91074 94056 58168 50268 65468 74105 85025 81117 82146 76862 86804 78765 93172 82740 86089 75272 83524 97970 87067 89368 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53601000 24489 3613 22987 45993 37045 37045 2295 1 9606 Homo sapiens -0.06550157970821147 SGFEPASLK Unmodified 934.476 0.47599688 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5;B4E3S1;A0A8I5KYI1;Q5BKV1;A0A8I5KU92;B1AH99 MYH9 Myosin-9 yes no 0 0 0 7.5 0.5 1 1 48.932 49.008 2 0.0059213 13164 20230619_1887_Aki_TMTPro18x_K_F7 104.2 40.635 94836 70100 71762 93688 85182 107250 85800 95215 134840 106240 126290 129450 134400 111090 90400 142670 154050 139240 87462 64395 75163 92797 87700 107100 87987 98387 134140 107560 130260 129800 134870 116860 96493 142510 146680 132340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225580000 24490 148 22988 45994;45995 37046 37046 1 9606 Homo sapiens 0.006137921435197313 SGFFTSLDPR Acetyl (Protein N-term) 1167.556 0.55603812 4265 Q8TBB6 SLC7A14 Probable cationic amino acid transporter yes yes 1 0 0 5 0 1 63.803 63.849 2 0.002334 19687 20230619_1885_Aki_TMTPro18x_K_F5 65.305 47.27 5679.4 6739.3 6577.2 7879.5 5501.9 8375.8 7554.7 8076.8 7971.1 9309.6 9290.2 9904.3 11180 7680 9563.4 8965.8 12419 11878 5273.2 6172.6 6602.3 7869.6 5869.6 8420.2 7514.9 8304.1 8156.3 9355.9 9556.6 9947.1 11264 8077.3 9906.2 9153.1 11851 11253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21838000 24491 4265 22989 45996 37047 37047 1 9606 Homo sapiens -0.021037662532762624 SGFNFGGTGAPTGGFTFGTAK Acetyl (Protein N-term) 2019.9327 0.9326553 38 A0A024QZF1;P37198;M0QXN5;M0QX10;M0QYY0;M0QX13;M0QZL5;M0R1S1;M0QX64;M0R302;Q8WYU3 hCG_19665;NUP62;pp7052 Nuclear pore glycoprotein p62 yes no 1 0 0 2.5 0.5 1 1 64.501 64.521 3 0.00012821 20343 20230619_1882_Aki_TMTPro18x_K_F3 61.276 56.172 42019 33469 41594 43771 39450 41113 43196 46231 44443 49522 46626 41454 45967 41564 43659 53197 48007 56882 38844 30729 42264 43329 41222 41897 43402 46955 45328 49610 47677 42484 46845 43495 44734 53443 45952 53955 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124430000 24492 38 22990 45997;45998 37048 37048 1 9606 Homo sapiens -0.03651372003901088 SGFNLEELEK Unmodified 1164.5663 0.56626845 219 A0A024R2Z6;Q9BVP2-2;Q9BVP2 GNL3 Guanine nucleotide-binding protein-like 3 yes no 0 0 0 4.25 0.829 1 1 2 57.91 57.941 2 9.5471E-08 17453 20230619_1883_Aki_TMTPro18x_K_F4 224.68 146.49 238700 210360 228180 244440 207790 247480 247450 243930 258050 276440 265540 263180 304460 245810 275970 331300 295150 313630 220740 192840 232480 244150 218650 249950 247600 250350 262760 277200 273820 267310 308060 258720 282500 330390 282340 298000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 64498000 24493 219 22991 45999;46000;46001;46002 37049;37050;37051 37050 3 9606 Homo sapiens -0.00943203318729502 SGFNPNQGFFK Unmodified 1241.5829 0.58292157 2488 B4DHJ9;Q15386 UBE3C Ubiquitin-protein ligase E3C yes no 0 0 0 3 0 1 55.267 55.308 3 0.00020674 16482 20230619_1882_Aki_TMTPro18x_K_F3 110.66 94.771 56540 54252 56691 55103 58915 72775 69905 76056 83084 56239 60555 47795 57506 45605 65942 57087 63229 58263 52338 49659 57619 55857 61386 72318 70249 76893 82897 57684 62994 48906 59175 47753 66705 57277 60488 55345 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58842000 24494 2488 22992 46003 37052 37052 1 9606 Homo sapiens -0.02820657642109836 SGFSPELIDYLEGK Acetyl (Protein N-term) 1595.7719 0.77190413 4750 Q9Y5Q9;F8WC64;A0A494C1S7;Q9Y5Q9-2 GTF3C3 General transcription factor 3C polypeptide 3 yes no 1 0 0 4.5 0.5 1 1 66.857 66.885 2 0.025161 21169 20230619_1883_Aki_TMTPro18x_K_F4 61.353 43.042 1947.2 2063.3 3746.7 2117 2718 3174.5 3123.9 4478.5 3840.6 4137.4 4525.7 3370.7 3418.6 2970.2 4135.1 5195 3874.8 2963.7 1817.6 1888.2 3631.3 2153.8 2912.8 3159.4 3155 4467.8 3898.9 4173.1 4555.7 3451.5 3558.2 3191.2 4184 5057 3703.6 2842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12085000 24495 4750 22993 46004;46005 37053 37053 1 9606 Homo sapiens -0.0021509464995688177 SGGASHSELIHNLR Unmodified 1476.7433 0.74333839 1398 B7Z972;A0A384MDK7;A0A3F2YNX8;P22061;P22061-2;F6S8N6;H7C4X2;F8WDT3;F8WAV5;F8WAX2 PCMT1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 6.5 0.5 1 1 32.094 32.158 4 3.2279999999999998E-22 6195 20230619_1887_Aki_TMTPro18x_K_F7 232.6 198.82 20752 12169 23887 26945 29774 30511 46362 52404 15697 17978 22735 34897 23768 18432 36222 26588 35631 46328 19178 11270 24131 26040 30786 31042 44845 51074 18005 20446 23179 34097 24806 20015 36530 27710 34171 43754 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47721000 24496 1398 22994 46006;46007 37054 37054 1 9606 Homo sapiens 0.024036452841528444 SGGAVEPLGTR Unmodified 1042.5407 0.5407224 2605 H7C0E5;B4DVT8;H7BZM7;O75312 ZPR1 Zinc finger protein ZPR1 yes no 0 0 0 3.5 0.5 1 1 37.013 37.061 2 6.7065E-05 8332 20230619_1883_Aki_TMTPro18x_K_F4 140.78 113.66 93642 68405 76376 87426 88133 96594 84578 85246 106110 95525 108410 100880 105120 92181 98827 106620 128190 101210 86398 62811 79255 86825 90596 96722 86163 88157 106940 96194 110920 101920 107140 96113 102250 106600 122180 96286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88712000 24497 2605 22995 46008;46009 37055 37055 1 9606 Homo sapiens 0.021153669495106442 SGGEAFVLGEASGFVK Unmodified 1553.7726 0.77257283 4392 Q96RF0-2;Q96RF0-3;Q96RF0 SNX18 Sorting nexin-18 yes no 0 0 0 6.5 0.5 1 1 61.888 61.934 3 0.00045578 18664 20230619_1887_Aki_TMTPro18x_K_F7 80.102 69.467 159880 139560 157710 181850 102160 85251 131790 139060 153680 160720 181470 167860 126350 143240 167060 159460 165360 186380 147880 128090 159630 178950 111110 94880 132000 139070 156360 161400 182430 169270 132870 149310 169050 161520 158380 176660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363820000 24498 4392 22996 46010;46011 37056 37056 1 9606 Homo sapiens 0.017837447897363745 SGGELDIVVTSNK Unmodified 1317.6776 0.67760981 4380 Q96M27-5;Q96M27;Q96M27-3;Q96M27-2;Q96M27-4 PRRC1 Protein PRRC1 yes no 0 0 0 4.5 0.5 1 1 52.08 52.129 2 4.0139E-08 14656 20230619_1885_Aki_TMTPro18x_K_F5 151.15 97.981 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24499 4380 22997 46012;46013 37057;37058 37058 2 9606 Homo sapiens 0.031478113185585244 SGGGGGGGGCGGGGGVSSLR Unmodified 1548.6699 0.66991545 1272 P13645;CON__P13645;A0A1B0GVI3 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 6.5 0.5 1 1 32.42 32.485 3 1.6009E-11 6718 20230619_1886_Aki_TMTPro18x_K_F6 135.81 129.78 + 5522.7 4012.4 4866.8 4847.9 115850 6536.5 7771.3 5749.4 13107 6516.6 8127.4 8424.3 7657.3 9346.1 8435.9 4394.3 8221.5 7344.7 5098.1 3682.3 6479.4 4849.8 107720 6809 14238 5953.8 12996 6623.4 8554.8 8487.1 7887.6 9338.9 8529.2 4677.7 7862.3 6948 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44095000 24500 1272 22998 46014;46015 37059;37060 37059 2 9606 Homo sapiens -0.08247271220625407 SGGGGGGGGSSWGGR Unmodified 1191.5017 0.50171113 3836 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 5.5 1.71 1 1 1 1 1 1 30.777 30.839 2 1.1712E-32 5610 20230619_1887_Aki_TMTPro18x_K_F7 247.13 235.64 78204 44033 105040 85773 148670 154960 104040 131710 115400 88270 128380 119170 135790 107300 124890 39054 148940 101140 72378 40703 104990 84048 149640 150820 107960 134850 117370 92519 131370 119090 137770 107590 128000 44134 141940 95579 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 406790000 24501 3836 22999 46016;46017;46018;46019;46020;46021 37061;37062;37063;37064;37065 37064 5 9606 Homo sapiens -0.08637965352158972 SGGGGGGGLGSGGSIR Unmodified 1231.5905 0.59052614 2786 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 7 0.816 1 1 1 33.323 33.364 2 3.9379E-33 6633 20230619_1887_Aki_TMTPro18x_K_F7 246.25 203.97 + 11948 17896 41547 37701 82811 65317 207290 28907 84623 4538.7 16488 33738 15651 115570 15978 7743.7 75957 17226 11331 16507 40497 36737 85382 63150 197290 31947 90028 7141.8 20335 35621 16833 110320 19471 10167 71689 16476 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60233000 24502 2786 23000 46022;46023;46024 37066;37067 37067 2 9606 Homo sapiens -0.016005501124709554 SGGGGSSVSGGGGGGGAGAGGCGGPGGALTR Unmodified 2332.021 0.021046166 3196 M0R044;M0R0F2;W4VSR2;M0R189;Q8N594-2;Q8N594 MPND MPN domain-containing protein yes no 0 0 0 7 0 1 36.485 36.553 3 2.4864E-08 7914 20230619_1887_Aki_TMTPro18x_K_F7 91.086 87.799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24503 3196 23001 46025 37068 37068 1 9606 Homo sapiens -0.09168351493599403 SGGGYIVVDPILR Unmodified 1344.7402 0.74015049 1056 A0A0S2A4E4;A0A0M4G3H8;P35573-2;P35573-3;P35573;G1UI17 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes no 0 0 0 8 0 1 57.672 57.724 2 1.4662E-07 16888 20230619_1888_Aki_TMTPro18x_K_F8 168.3 125.7 44606 39772 46391 41871 42211 50877 53627 49486 53254 57109 61415 56090 67981 53672 59552 68514 63124 66092 41283 36425 46899 42266 44494 50738 53404 50853 54614 57274 62881 56950 68740 56249 60953 68449 60382 62789 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46544000 24504 1056 23002 46026 37069 37069 1 9606 Homo sapiens 0.08157002177426875 SGGIETIANEYSDR Unmodified 1510.69 0.68996541 1249 Q53ZP9;A0A140VKE7;B4DZR0;O95757;D6RJ96;B3KNM0 HSPA4L Heat shock 70 kDa protein 4L yes no 0 0 0 3 0 1 49.691 49.767 2 3.6185E-13 14011 20230619_1882_Aki_TMTPro18x_K_F3 172.76 150.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24505 1249 23003 46027 37070 37070 1 9606 Homo sapiens -0.04495197009077856 SGGMERPFVLAR Oxidation (M) 1334.6765 0.67650438 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 1 1 1.5 0.5 1 1 38.731 38.765 3 7.4291E-05 9222 20230619_1881_Aki_TMTPro18x_K_F2 118.61 74.307 333360 310160 320960 342390 424550 406810 447470 484700 417750 366970 402580 421860 397110 338060 463000 458640 432510 455740 308420 284130 328760 344190 432740 408450 448940 486410 426550 378680 413910 423180 408590 357800 467960 458800 414280 432810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 908170000 24506 3900;2497 23004 46028;46029 37071;37072 37072 1530 2 9606 Homo sapiens 0.022553184686785244 SGGMERPFVLAR Unmodified 1318.6816 0.68158975 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 1 2.5 0.5 1 1 43.295 43.37 3 4.9918E-10 11366 20230619_1881_Aki_TMTPro18x_K_F2 159.5 111.56 331430 286390 327740 292260 320190 402410 384240 393760 436430 357130 363780 411500 385170 344210 414940 403680 452710 421590 306540 262250 333010 296390 335320 398330 385330 401730 438540 364650 378070 412910 394060 360340 423410 405780 432570 400350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 608920000 24507 3900;2497 23004 46030;46031 37073;37074 37073 2 9606 Homo sapiens 0.03499622331287355 SGGMSNELNNIISR Oxidation (M) 1506.7097 0.709655 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 1 0 6.67 0.471 1 2 46.356 46.442 2 1.9836E-06 12310 20230619_1886_Aki_TMTPro18x_K_F6 130.71 116.02 85202 75031 81201 85364 64500 61594 74220 66698 73934 93190 102440 88676 100120 80264 95503 114640 95386 99885 78791 68767 82568 85085 68497 64276 74321 68564 76535 92585 103570 90033 101990 84896 97301 113770 91297 95011 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172230000 24508 161 23005 46032;46033;46034 37075;37076 37075 98 2 9606 Homo sapiens -0.023431442699347826 SGGMSNELNNIISR Unmodified 1490.7147 0.71474038 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 7.5 0.5 1 1 52.874 52.946 3 3.5024E-12 14864 20230619_1887_Aki_TMTPro18x_K_F7 148.85 130.44 153350 129600 157190 156980 150270 151800 148300 155890 154880 174100 193070 177470 214480 166290 162840 220100 199310 181000 141850 118870 159210 156260 156450 154050 149990 159470 159050 175030 197070 179800 215660 174750 168820 217970 190220 172400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 595560000 24509 161 23005 46035;46036 37077;37078 37077 2 9606 Homo sapiens -0.010988404073259517 SGGNEVSIEER Unmodified 1175.5418 0.54184461 3916 Q15061 WDR43 WD repeat-containing protein 43 yes yes 0 0 0 1 0 1 35.245 35.245 2 7.5358E-12 8080 20230619_1880_Aki_TMTPro18x_K_F1 217.61 176.19 176500 116120 162050 174400 208890 219470 199860 206050 244230 219390 233650 234930 276640 211090 194630 203660 287740 239140 162900 106870 166590 171840 213040 218150 203390 211730 245890 221550 242010 236900 277000 218310 204500 206770 274070 226940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292390000 24510 3916 23006 46037 37079 37079 1 9606 Homo sapiens -0.03890463472248484 SGGNLEVMGLMLGK Unmodified 1404.7105 0.71050662 476 A0A024R7W9;Q92905;Q59GH5;E5RHF2;E5RHH5 COPS5 COP9 signalosome complex subunit 5 yes no 0 0 0 2 0 1 63.074 63.083 3 0.018339 20016 20230619_1881_Aki_TMTPro18x_K_F2 58.885 43.129 21684 19440 23787 21698 22459 23007 21658 25083 28814 25532 21350 25426 28184 28428 28450 30128 25040 28571 20079 17813 23950 21762 23405 23224 22120 25481 28666 25787 22592 25912 28591 29293 28747 30161 24015 27141 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19913000 24511 476 23007 46038 37080 37080 1 9606 Homo sapiens 0.024339788453971778 SGGNSYGSGGASYNPGSHGGYGGGSGGGSSYQGK Unmodified 3011.2302 0.2302469 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;K7ELV3 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 8 0 1 39.08 39.067 4 0.00042145 9086 20230619_1888_Aki_TMTPro18x_K_F8 71.068 69.755 6004.8 4186.5 8715.1 11404 8276.6 13156 8302.8 10348 3287.4 12218 11979 16514 13794 7029.6 12230 13469 14123 23102 5568.1 3890.1 8641.8 10925 8644.1 13081 8234.7 10814 4018.7 12348 11995 16229 13911 7940.1 12578 13958 13557 21808 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 10993000 24512 3823 23008 46039 37081;37082 37081 2 9606 Homo sapiens -0.19491901517403676 SGGQVRDEYRQDYDAGR Unmodified 1970.8831 0.88307935 3633 P52298;P52298-3;C9JQX9;B3KSB0;P52298-2 NCBP2 Nuclear cap-binding protein subunit 2 yes no 0 0 2 3 0 1 31.97 32.048 3 0.00049589 6379 20230619_1882_Aki_TMTPro18x_K_F3 91.657 58.453 3957.5 5694.2 5127.7 4828.1 6730.5 3382.9 5783.4 6740.7 3381.7 6585.5 5958.1 5583.1 6487.8 3804.9 4145.9 6374.8 7053.1 4985.1 3685.7 5199.4 5128.9 4939.2 6796.1 3624.1 5818.8 6645.8 3701.5 6618.6 6010.8 5654.8 6483.3 4126 4428.8 6280 6706 4757.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5386900 24513 3633 23009 46040 37083 37083 1 9606 Homo sapiens -0.06352686959962739 SGGSSQVYFMTLGR Unmodified 1488.7031 0.70311306 1017 E7EN19;Q53TX8;A0A0D9SEY1;B7Z388;O95819-3;O95819-6;G5E948;V9HWH3;O95819-2;B7Z3V5;O95819;O95819-5;H7C360;O95819-4;E7ENQ1;Q5MD60;E7EX83;H7C0P6 MAP4K4;HEL-S-31 Mitogen-activated protein kinase kinase kinase kinase 4 yes no 0 0 0 4 0 1 54.937 54.948 2 1.9475E-06 16197 20230619_1883_Aki_TMTPro18x_K_F4 134.56 117.24 38163 35617 40847 39413 33623 40263 42152 34520 39481 43125 39143 41395 41483 42402 42784 41341 41946 43655 35340 32629 41158 39518 35725 40528 41925 35924 40388 43077 40313 42112 42371 43625 43429 41704 40153 41433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21169000 24514 1017 23010 46041 37084 37084 1 9606 Homo sapiens -0.02169037430667231 SGGTEGLLAEK Unmodified 1060.5401 0.5400537 4661 Q9UHB9;B4DVI7;Q9UHB9-4;B3KMI9;Q96K98 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 0 3.5 0.5 2 2 47.062 47.123 2;3 0.00021356 12658 20230619_1883_Aki_TMTPro18x_K_F4 110.08 84.034 170020 125930 158090 169670 185970 214420 184810 201240 246640 220030 246980 260220 269860 234030 226010 268240 288150 255240 157030 115690 162080 168310 191140 213060 188350 206930 247710 222660 254420 261480 272700 244000 234230 268190 274870 242690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 373720000 24515 4661 23011 46042;46043;46044;46045 37085;37086 37086 2 9606 Homo sapiens 0.012205275098040147 SGGTPYIGSK Acetyl (Protein N-term) 1007.4924 0.49237523 4248 Q8ND56-3;Q8ND56-2;Q8ND56;I3L4Q1 LSM14A Protein LSM14 homolog A yes no 1 0 0 5 0 1 46.886 46.963 2 0.0010715 12453 20230619_1885_Aki_TMTPro18x_K_F5 58.981 50.562 60252 55440 65547 76668 75577 78039 77621 65513 93202 71547 88682 75371 88788 70611 105660 73053 86716 74202 55797 50905 66360 75657 77722 78528 78594 68021 93798 72173 91161 76228 91357 73148 105910 73555 83066 70511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76170000 24516 4248 23012 46046 37087 37087 1 9606 Homo sapiens -0.011071266903627475 SGHFEQAIK Unmodified 1015.5087 0.50869399 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 6.5 0.5 1 1 38.194 38.264 3 0.00059892 8848 20230619_1886_Aki_TMTPro18x_K_F6 109.42 63.261 67438 37652 60968 68807 70137 73448 74211 75764 92878 69563 82560 92185 84919 63023 67170 82696 95686 103670 62184 34772 62655 66936 72246 73927 75157 77087 93064 71340 85334 91558 85722 67071 70275 83899 91331 98217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119180000 24517 2337;3778;3779 23013 46047;46048 37088 37088 1 9606 Homo sapiens 0.0015599926638287798 SGINPFDSQEAK Unmodified 1291.6044 0.60444487 3691 Q53HJ0;Q59EL2;P61201;P61201-2;B2R6N0;B4DIH5 COPS2 COP9 signalosome complex subunit 2 yes no 0 0 0 4.5 0.5 1 1 50.256 50.332 2 2.7103E-09 13901 20230619_1885_Aki_TMTPro18x_K_F5 206.1 154.75 36915 28632 30350 36228 25051 37918 36474 35887 45019 49371 47444 46884 55464 43787 35323 63825 51315 50262 34073 26282 31348 35976 26856 38142 36378 37164 45501 49098 48881 47632 55386 46325 37315 62969 48936 47887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36825000 24518 3691 23014 46049;46050 37089;37090 37090 2 9606 Homo sapiens -0.02969317404040339 SGIQPLCPER Unmodified 1155.5706 0.57064232 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 5.5 0.5 1 1 41.467 41.557 2 0.00029922 10162 20230619_1885_Aki_TMTPro18x_K_F5 132.78 100.82 266870 205200 216270 226970 221550 255220 266670 260200 285440 244240 228510 198630 254340 191650 208850 284580 253230 203580 246290 188110 224080 227900 231110 256080 266790 265020 287410 246380 238040 203740 256510 202860 216030 279740 241520 194410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 405590000 24519 3578 23015 46051;46052 37091;37092 37091 2 9606 Homo sapiens -0.0009201737682360545 SGIYETR Unmodified 824.40283 0.40283194 853 Q96CW1;Q96CW1-2;A0A087WY71;B4E304;E9PFW3;B4DNB9;C9JPV8;C9JGT8;B4DJB1;C9JJD3;B4DFM1;C9JTK4;A0A8I5KWD3;B4DTI4 AP2M1 AP-2 complex subunit mu yes no 0 0 0 3.5 0.5 1 1 34.418 34.474 2 0.022901 7301 20230619_1883_Aki_TMTPro18x_K_F4 101.28 62.312 217270 129240 204560 226520 238820 222610 227680 241970 293930 247940 296690 297290 296260 252760 239850 191120 339900 283270 200470 119240 209440 220580 244870 225810 232310 246030 295630 251810 304170 297850 299780 259060 250090 198420 323860 268280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 194200000 24520 853 23016 46053;46054 37093 37093 1 9606 Homo sapiens -0.016393365790918324 SGKPILEGAALDEALK Unmodified 1610.8879 0.88793694 1579 A0A5F9ZHQ7;Q68CZ6-2;Q68CZ6 HAUS3 HAUS augmin-like complex subunit 3 yes no 0 0 1 7 0 1 56.45 56.508 3 6.9269E-11 16382 20230619_1887_Aki_TMTPro18x_K_F7 150.39 124.24 41434 32320 32614 42396 35937 42413 42279 40972 44552 49094 45245 48474 47589 39975 45456 43598 42354 45173 38234 29677 33980 41969 37276 42844 42326 42184 45321 49149 46521 48912 48381 41714 46080 43855 40573 42879 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106100000 24521 1579 23017 46055 37094 37094 1 9606 Homo sapiens 0.1069284892075757 SGKWEGLVYAPPGK Unmodified 1487.7773 0.77726428 1525 A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 0 0 1 3 0 1 54.191 54.238 3 5.7284E-05 16022 20230619_1882_Aki_TMTPro18x_K_F3 103.21 90.336 180360 172520 184440 176920 186780 171820 202630 199900 157470 205350 207840 148310 166440 128860 198650 151410 159230 100630 166980 157930 186980 178420 193810 174970 202110 202390 165170 205320 208760 152610 172530 134780 198980 149150 152330 96335 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101080000 24522 1525 23018 46056 37095 37095 1 9606 Homo sapiens 0.05288673723180182 SGKYDLDFK Unmodified 1071.5237 0.52367535 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2 ENO1 Alpha-enolase;Enolase yes no 0 0 1 7.4 0.8 1 1 3 49.341 49.416 3;4 0.0070908 13235 20230619_1888_Aki_TMTPro18x_K_F8 72.434 46.775 21208000 18434000 18978000 20679000 23017000 19265000 21122000 22739000 21249000 28260000 28252000 25231000 28298000 23638000 26483000 30434000 26457000 23584000 19601000 16893000 19526000 20691000 23490000 19693000 21425000 23131000 21956000 28154000 28640000 25711000 28785000 24789000 26982000 30084000 25295000 22483000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 33883000000 24523 293 23019 46057;46058;46059;46060;46061 37096;37097;37098 37097 3 9606 Homo sapiens -0.009225536563008063 SGLELYAEWK Unmodified 1194.5921 0.59208927 1633 A0A6Q8PGB0;P24928;P24928-2;Q15161 POLR2A;POLR2 DNA-directed RNA polymerase II subunit RPB1;DNA-directed RNA polymerase yes no 0 0 0 7 0 1 61.285 61.324 3 0.0098595 18356 20230619_1887_Aki_TMTPro18x_K_F7 63.624 27.099 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24524 1633 23020 46062 37099 37099 1 9606 Homo sapiens 0.0025769092355858447 SGLGELILPENEPGSSIMPGK Oxidation (M) 2140.0722 0.07218525 3406 P07954-2;A0A804HI24;A0A0S2Z4C3;P07954 FH Fumarate hydratase, mitochondrial yes no 0 1 0 5.67 0.471 1 2 61.642 61.693 3 0.014056 18806 20230619_1886_Aki_TMTPro18x_K_F6 56.081 42.453 30107 29661 27934 36535 34683 42453 39289 37135 49848 30394 32056 35750 37108 27788 41024 32868 36849 42491 27858 27196 28723 36392 35667 42344 39641 38138 49415 31281 33990 35773 37877 29226 41372 33509 35336 40236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113200000 24525 3406 23021 46063;46064;46065 37100;37101 37101 2022 2 9606 Homo sapiens 0.04775204498491803 SGLGELILPENEPGSSIMPGK Unmodified 2124.0773 0.077270628 3406 P07954-2;A0A804HI24;A0A0S2Z4C3;P07954 FH Fumarate hydratase, mitochondrial yes no 0 0 0 6 0 1 62.701 62.753 3 2.6362E-16 19338 20230619_1886_Aki_TMTPro18x_K_F6 117.55 111.13 147510 135910 168420 154570 137760 182430 193730 186110 204800 195480 197540 216950 210790 176760 208110 229960 203610 239550 136670 124550 168880 155030 147170 182390 192450 190120 207690 197690 203780 217900 214570 186490 211560 230700 195110 227290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 330440000 24526 3406 23021 46066 37102;37103 37102 2 9606 Homo sapiens 0.06019508361123371 SGLGSGPK Unmodified 701.3708 0.37080353 549 Q53GB9;A0A024R8Z1;Q5VV89;O14880 MGST3 Microsomal glutathione S-transferase 3 yes no 0 0 0 7.5 0.5 1 1 37.064 37.09 2 0.0065878 8115 20230619_1887_Aki_TMTPro18x_K_F7 110.12 71.314 103620 57141 162490 176940 322040 318610 218910 279230 217520 95819 204810 246930 161150 187620 208390 49440 215870 183580 96066 53315 162630 170390 318610 310260 226750 282850 220700 111390 209230 241580 168430 188020 210570 60002 206240 173060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 89532000 24527 549 23022 46067;46068 37104;37105 37104 2 9606 Homo sapiens 0.008172957377610146 SGLNQIPNR Unmodified 997.53049 0.53049207 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q6JH03;Q6JH02 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 8 0 1 37.538 37.524 2 0.00013424 8487 20230619_1888_Aki_TMTPro18x_K_F8 150.05 118.68 52302 32263 46367 54488 61788 73352 61644 58046 82477 43327 52838 49257 51399 41049 57945 43672 57227 50436 48243 29746 47888 53388 63046 72334 62757 59975 81521 44851 55535 49481 52810 42773 58683 44273 54715 47857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21832000 24528 1863 23023 46069 37106 37106 1 9606 Homo sapiens 0.03162804014948506 SGLNQIPNRR Unmodified 1153.6316 0.63160309 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q6JH03;Q6JH02 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 1 3.5 1.12 1 1 1 1 32.506 32.574 3 0.00024831 6562 20230619_1883_Aki_TMTPro18x_K_F4 117.7 75.099 148410 124170 130190 138240 187250 185640 175630 177910 219540 75671 93881 76925 81802 72998 125460 77457 104580 74585 137110 113800 134660 139120 189610 184000 178970 179520 215670 82267 101690 78067 86020 75646 125380 77775 100050 70981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178630000 24529 1863 23024 46070;46071;46072;46073 37107 37107 1 9606 Homo sapiens 0.060932557176556656 SGLPRPSAPSAGGIPVPR Unmodified 1714.9479 0.94785186 592 A0A024R9T6;Q9P270;D6RIF6;H0Y9L2 hCG_17415;SLAIN2 SLAIN motif-containing protein 2 yes no 0 0 1 5 0 1 45.604 45.681 3 0.003624 11884 20230619_1885_Aki_TMTPro18x_K_F5 69.747 54.481 59738 43572 54139 61788 61269 71080 59811 68353 83975 61816 59355 57436 67251 62193 54512 69943 65060 65457 55158 40055 55616 60999 63125 71076 61142 69813 83157 62750 62372 58702 67836 64384 56323 69871 62149 62217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14950000 24530 592 23025 46074 37108 37108 1 9606 Homo sapiens 0.11897584374628423 SGLQGYDMSTFIR Unmodified 1473.6922 0.69221402 348 B5BU72;A0A024R5L7;A8K5U9;A0A024R5P1;Q13492-3;Q13492-2;Q13492-5;Q13492;Q13492-4;E9PI56;E9PKP6;E9PLJ8 PICALM Phosphatidylinositol-binding clathrin assembly protein yes no 0 0 0 1.5 0.5 1 1 58.701 58.701 2;3 1.921E-05 17993 20230619_1880_Aki_TMTPro18x_K_F1 124.38 96.756 39444 34275 36771 43824 32803 46880 40658 39755 43375 45412 41848 39756 44695 36155 37465 46605 43650 41142 36467 31451 37573 43495 34686 46980 40630 41266 43996 45422 43115 40503 45174 37973 38615 46336 41687 39144 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46958000 24531 348 23026 46075;46076 37109;37110 37109 2 9606 Homo sapiens -0.02568439804940681 SGLSDIILGK Unmodified 1001.5757 0.57571092 449 A5PKY0;A0A024R7G6;M0R165;A8K5P4;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;K7EJR2;M0R330;M0R1V5;M0QX30 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 1 0 1 60.706 60.706 3 0.021094 18778 20230619_1880_Aki_TMTPro18x_K_F1 61.56 34.231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24532 449 23027 46077 37111 37111 1 9606 Homo sapiens 0.07498609757476515 SGLSVSSLRPNRK Unmodified 1399.7896 0.7895603 2288 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;H0YCK7 EEF1D Elongation factor 1-delta yes no 0 0 2 7.5 0.5 1 1 38.411 38.435 4 1.3281E-07 8854 20230619_1888_Aki_TMTPro18x_K_F8 151.16 122.96 140020 121970 136560 154490 53666 47576 89053 79606 85563 94820 103030 82681 93080 70940 95965 115580 118340 75280 129500 111910 137810 151980 63147 57048 87789 79748 88046 94583 104330 84222 95418 75904 98863 113130 112720 72086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61360000 24533 2288 23028 46078;46079 37112 37112 1 9606 Homo sapiens 0.10565710186210708 SGLTGYIK Unmodified 837.45962 0.45961853 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;Q96K97;Q9UHB9-3 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 0 2 0 1 49.501 49.56 3 0.0040379 14231 20230619_1881_Aki_TMTPro18x_K_F2 94.114 47.689 74613 63829 60616 83433 82304 86982 81682 82771 101800 93477 92815 84160 93698 76897 94723 106310 100100 92751 68905 58587 63203 82647 83791 87596 82990 85137 102220 93640 95643 85677 95642 81120 96663 105570 95676 88266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81969000 24534 4661 23029 46080 37113 37113 1 9606 Homo sapiens 0.03438710977411574 SGLTVPTSPK Unmodified 985.54441 0.5444108 2235 B4DKX4;B2R6E2;Q53EL6-2;Q53EL6;Q5VZS7 PDCD4 Programmed cell death protein 4 yes no 0 0 0 1 0 1 46.072 46.072 3 0.025936 12771 20230619_1880_Aki_TMTPro18x_K_F1 58.37 38.583 32221 23840 30399 38487 34039 39172 46129 44196 39494 39498 37868 36949 40568 27634 41196 40450 45210 40881 29762 21949 31150 37648 35378 39646 45589 44682 40553 40070 39059 37322 41307 29528 42094 40467 43188 38840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30200000 24535 2235 23030 46081 37114 37114 1 9606 Homo sapiens 0.051060367233731085 SGLVPQQIK Unmodified 968.56548 0.56548059 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;B4DKR8;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JHZ8;C9JK79;C9JHS7;C9JT62;C9JQ82;C9JHN6;C9JEJ8;C9JBS3;C9JMQ6 HDLBP Vigilin yes no 0 0 0 2 0 1 47.806 47.877 2 0.072856 13498 20230619_1881_Aki_TMTPro18x_K_F2 63.48 31.259 51800 35899 44990 63808 54364 73987 52665 61517 75760 37257 35603 38447 32906 31937 46252 36573 41925 32447 47800 33104 46538 62190 55855 73664 53900 63051 74156 39069 38345 38763 34352 33377 46501 36486 40090 30897 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32187000 24536 292 23031 46082 37115 37115 1 9606 Homo sapiens 0.07994046822909695 SGMNVAR Unmodified 733.35411 0.35410761 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;A0A024R609;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;V9HWB8;P14618;A0A8V8TNX9 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 5.5 1.71 1 1 1 1 1 1 30.461 30.526 2 0.024326 5543 20230619_1887_Aki_TMTPro18x_K_F7 99.375 45.319 287070 128980 359520 342140 525030 599370 378650 506920 410130 317190 503430 618740 432380 448050 544950 162660 600320 515850 265250 120070 361560 330910 528320 583800 391740 518710 419330 339880 510060 607740 449410 452650 552990 189180 573260 486530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 476010000 24537 370;3451 23032 46083;46084;46085;46086;46087;46088 37116;37117;37118 37117 3 9606 Homo sapiens -0.023235284198449335 SGMTTGSTLPVEGGFWAC Unmodified 1856.8073 0.80732013 1484 A0A384NY14;Q7Z4W1;J3QRQ2 DCXR L-xylulose reductase yes no 0 0 0 7 0 1 64.305 64.334 2 2.1383E-23 19806 20230619_1887_Aki_TMTPro18x_K_F7 205.57 201.92 35508 27341 34998 37968 29121 39116 38728 41776 48982 54437 61684 69614 60867 61555 63306 65668 73846 83227 32817 25122 35535 37481 31041 39502 38832 42830 49830 54787 62718 69684 62337 63952 64928 66899 70618 78829 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65917000 24538 1484 23033 46089 37119;37120 37120 2 9606 Homo sapiens -0.08681123456108253 SGMVQTEAQYR Oxidation (M) 1284.5768 0.57684991 1318 Q06124-1;Q06124;A0A8I5KW48;A0A3G1LBG2;A0A1W2PPU4;A0A8I5QJ58;A0A8I5KRZ3;A0A0U1RRI0 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 0 1 0 4 0 1 33.33 33.383 2 0.0004399 6885 20230619_1883_Aki_TMTPro18x_K_F4 114.4 105.19 17209 13078 15429 18965 19224 14787 15248 16641 19221 17041 25656 25283 21329 18769 21018 20752 25960 27012 15892 12023 15888 18607 19522 15326 15741 16894 19594 17449 25825 25078 21896 19681 21649 21173 24798 25586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14901000 24539 1318 23034 46090 37121 37121 825 1 9606 Homo sapiens -0.054055439359217416 SGMVQTEAQYR Unmodified 1268.5819 0.58193529 1318 Q06124-1;Q06124;A0A8I5KW48;A0A3G1LBG2;A0A1W2PPU4;A0A8I5QJ58;A0A8I5KRZ3;A0A0U1RRI0 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 0 0 0 5 0 1 38.417 38.51 2 0.0040516 8922 20230619_1885_Aki_TMTPro18x_K_F5 108.4 99.079 31751 17708 28653 29684 25266 30552 31897 31221 34875 40979 42812 39682 46026 35713 39506 48989 42534 44419 29277 16334 29324 28992 26719 30821 31880 32110 35700 40840 43667 40234 46535 37683 40508 48731 40680 42231 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21026000 24540 1318 23034 46091 37122 37122 1 9606 Homo sapiens -0.04161240073312911 SGNFGGSR Unmodified 780.35147 0.35146507 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A024RA28 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 5.5 0.5 1 1 29.174 29.226 2 0.0053697 5390 20230619_1885_Aki_TMTPro18x_K_F5 113.71 77.826 37827 13667 57868 54842 97566 76141 61074 80913 49911 23307 60995 69632 31862 47026 72354 16174 68199 55784 35009 12882 57648 52208 96881 75458 63433 80741 51796 28036 60924 67790 35497 47549 72311 19160 65206 52610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107010000 24541 3491 23035 46092;46093 37123;37124 37123 2 9606 Homo sapiens -0.04749660553147805 SGNIVAGIANESK Unmodified 1258.6517 0.65172941 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 6.5 0.5 1 1 49.554 49.635 3 1.332E-07 13447 20230619_1887_Aki_TMTPro18x_K_F7 145.52 130.32 159910 141190 143280 159470 120090 173300 160260 135270 162360 165120 208650 196510 208150 138260 169010 204020 182370 216570 147810 129390 146740 159720 127980 173260 159340 141750 167050 166220 211750 196210 210290 148190 173490 204540 174600 205440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 647850000 24542 1182 23036 46094;46095 37125 37125 1 9606 Homo sapiens 0.032749618669413394 SGNIVAGIANESKK Unmodified 1386.7467 0.74669243 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 1 2 0 1 47.448 47.524 3 0.0002478 13287 20230619_1881_Aki_TMTPro18x_K_F2 94.339 61.34 306390 267060 301580 292830 289870 306060 302010 311370 321530 358480 394690 357830 363120 280880 325960 373430 373580 326360 283390 244690 306480 293960 302230 308760 304630 318960 329490 359590 399830 360830 369640 297220 334990 371030 356650 310650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 197200000 24543 1182 23037 46096 37126;37127 37126 2 9606 Homo sapiens 0.06878895338127222 SGNVAELALK Unmodified 1000.5553 0.55530983 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;P49321-2;Q5T626;Q5T624;Q9P1N1;H0YDS9;H0YF33;E9PRH9 NASP Nuclear autoantigenic sperm protein yes no 0 0 0 7 0.816 2 2 2 51.293 51.37 2;3 4.1429E-07 14489 20230619_1886_Aki_TMTPro18x_K_F6 161.51 73.815 478270 412720 430840 453090 460010 507390 471250 445750 479340 538520 562140 487670 583910 429450 480960 572450 518390 503780 442030 378160 442150 455080 475860 507730 474880 462180 491520 537650 573230 495740 589830 452740 493460 568870 495530 479270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2082799999.9999998 24544 3605 23038 46097;46098;46099;46100;46101;46102 37128;37129;37130 37128 3 9606 Homo sapiens 0.0550543909763519 SGNWESSEGWGAQPEGAGAQR Unmodified 2159.9257 0.92567244 1696 A0A7P0T8Z7;A0A7P0Z4A2;A0A7P0Z4A5;A0A7P0T8D4;B2RAU5;A0A7P0T8S8;A0A7P0T8Z2;A0A7P0T8C7;Q9Y5X1;A0A7P0TBI9 SNX9 Sorting nexin;Sorting nexin-9 yes no 0 0 0 3 0 1 47.601 47.681 3 6.1228E-10 13087 20230619_1882_Aki_TMTPro18x_K_F3 124.08 120.58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24545 1696 23039 46103 37131 37131 1 9606 Homo sapiens -0.10789336622383416 SGNYFFLDD Unmodified 1076.4451 0.44509068 3692 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 3 0.816 1 1 1 63.981 63.997 2 0.008265 20122 20230619_1882_Aki_TMTPro18x_K_F3 88.294 79.08 118540 99489 106200 117690 100920 132030 114610 114100 126620 159250 136550 156600 168710 144330 148440 184430 163660 194590 109540 91232 108920 117540 105820 131980 115170 119010 128940 158400 141190 158620 170220 151440 152350 185140 156660 184600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 445090000 24546 3692 23040 46104;46105;46106 37132 37132 1 9606 Homo sapiens -0.09007405961369841 SGNYPSSLSNETDR Unmodified 1525.6645 0.66447894 2416 B4DWZ7;B3KTN5;Q9NS86 LANCL2 LanC-like protein 2 yes no 0 0 0 3 0 1 38.633 38.687 2 1.6383E-06 9061 20230619_1882_Aki_TMTPro18x_K_F3 136.38 125.45 15095 9904.4 12462 13532 16515 16192 19383 17111 20708 16090 15451 15828 18983 15887 13851 19439 25426 22415 13920 9105.3 12948 13402 16898 16194 19401 17392 20803 16318 16254 16089 19034 16583 14841 19624 24194 21269 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33433000 24547 2416 23041 46107 37133 37133 1 9606 Homo sapiens -0.07732671531471169 SGNYTVLQVVEALGSSLENPEPR Unmodified 2458.234 0.23398228 4399 Q96T76;Q96T76-8;Q96T76-9;Q96T76-5;Q5T454;Q96T76-7;B0QZ77;H7C0A9;F8WCH8 MMS19 MMS19 nucleotide excision repair protein homolog yes no 0 0 0 7.5 0.5 1 1 67.043 67.064 3 8.186299999999999E-44 20946 20230619_1887_Aki_TMTPro18x_K_F7 220.25 200.1 2388.3 2226.9 3101.3 3323.5 1907.1 1990.5 2774 3843.7 2615.9 3007.2 4405 2222.7 4082.2 2819.8 3443.4 2701.6 3348.4 3878.1 2215.8 2046.5 3074.3 3249.9 2094.7 2155.4 2748.3 3773.8 2742.9 3056.9 4405.6 2321.5 4139.6 2889.3 3503.5 2784.7 3208.3 3669 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31065000 24548 4399 23042 46108;46109 37134 37134 1 9606 Homo sapiens 0.0631946478520149 SGPASTFNDR Unmodified 1050.473 0.47303677 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;A0A6I8PIP7;Q9P2J5-3;Q9HAM7;Q9NPU8;Q9NVC0;Q9NVP8 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 4 0.816 1 1 1 35.04 35.107 2 1.8041E-10 7611 20230619_1882_Aki_TMTPro18x_K_F3 217.12 176.62 201380 163170 180930 199470 223240 228440 207730 205890 246300 231120 287170 297280 268630 231800 251840 283150 330040 300800 186040 149690 186210 198830 228080 228350 211580 212620 250280 234250 291960 296600 274050 243930 260850 284610 314820 285620 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 345570000 24549 1603 23043 46110;46111;46112 37135;37136;37137 37135 3 9606 Homo sapiens -0.05018082981291627 SGPDVETPSAIQICR Acetyl (Protein N-term) 1670.7934 0.79338463 3205 O00154-4;O00154-2;O00154-3 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes no 1 0 0 2.5 0.5 1 1 53.316 53.359 2 5.1770000000000004E-33 15858 20230619_1881_Aki_TMTPro18x_K_F2 190.86 177.28 13908 9998.8 11582 15699 12446 13608 14274 11864 17395 14792 19589 17494 17580 14900 19237 15491 18809 18160 12833 9203.5 11997 15343 12917 13875 14378 12337 17613 14883 19896 17555 18081 15489 19487 15720 17996 17223 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 402850000 24550 3205 23044 46113;46114 37138 37138 1 9606 Homo sapiens -0.015180328928863673 SGPFGQIFRPDNFVFGQSGAGNNWAK Unmodified 2797.3361 0.33609636 3748;1486;3381;1424;3870 A0A384MEE3;Q9BVA1;A0A024QZU2;A1L195;M0R1I1;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4DQN9;B7ZAK1;B4DMJ5;Q8IZ29;P68371;Q8N6N5;Q8IWP6;Q13885;B2R6L0;A5D907;A5D906;P04350;B4DJ43;B4DE77;M0QY85;M0QZL7;M0R278 TUBB2B;TUBB4A;TUBB;TUBB2C;TUBB4B;TUBB2A Tubulin beta-2B chain;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-4A chain no no 0 0 1 6 0.408 1 10 1 69.231 69.284 3;4 8.7245E-29 19421 20230619_1886_Aki_TMTPro18x_K_F6 184.59 173.18 912550 824200 909260 905880 677460 873780 846570 844990 994920 1101100 1066600 1100300 1152600 1063300 1055500 1065900 1104600 1243300 844340 755090 920490 908170 727750 885430 848930 872270 1008700 1099000 1095000 1115200 1169500 1098200 1077800 1081100 1057300 1178500 13 13 13 13 13 13 13 13 13 13 13 13 13 13 13 13 13 13 45957000000 24551 1424;1486;3748;3870;3381 23045 46115;46116;46117;46118;46119;46120;46121;46122;46123;46124;46125;46126 37139;37140;37141;37142;37143;37144;37145;37146;37147;37148;37149;37150;37151 37140 13 9606 Homo sapiens 0.009321756473582354 SGPGLIGLGIK Unmodified 1010.6124 0.61243078 1819 Q6PGP7;A0A8V8TMA8;A0A8V8TMB2;A0A8V8TLS3;A0A8V8TLT2;A0A8V8TNJ4;A0A8V8TLU2;A0A8V8TLT7;A0A8V8TLU5;A0A8V8TNK4;A0A8V8TN92;A0A8V8TLR0;A0A8V8TNK9;A0A8V8TNA2;A0A8V8TNJ9;D6RCE2;H0Y915;A0A8V8TM98 TTC37 Tetratricopeptide repeat protein 37 yes no 0 0 0 3 0 1 58.286 58.316 3 0.00092808 17721 20230619_1882_Aki_TMTPro18x_K_F3 91.549 41.196 21763 18027 23153 26003 17045 23780 22654 23294 25742 24689 23526 25054 28804 21032 25701 27654 26616 30686 20136 16566 23335 25565 18376 24184 22623 23876 25966 24888 24485 25281 29060 22201 26251 27844 25486 29099 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11456000 24552 1819 23046 46127 37152 37152 1 9606 Homo sapiens 0.10754906374040729 SGPLFNFDVHDDVR Unmodified 1616.7583 0.75831975 3887 Q14320;B0S8I6 FAM50A Protein FAM50A yes no 0 0 0 4.5 0.5 1 1 54.581 54.622 3 9.4602E-07 16090 20230619_1883_Aki_TMTPro18x_K_F4 120.21 94.558 190490 180320 224570 174680 153300 204660 205470 201510 228720 280590 245410 262760 317140 253750 259750 293840 281630 312820 176570 165000 223950 177520 166470 204650 205020 208140 232700 278730 254250 267140 318560 264320 266540 295600 269470 296800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 255670000 24553 3887 23047 46128;46129 37153;37154 37153 2 9606 Homo sapiens -0.02538907638540877 SGPNIYELR Unmodified 1047.5349 0.53490874 3296 O75323;O75323-2;C9J7B1;C9K068;H7C333 GBAS Protein NipSnap homolog 2 yes no 0 0 0 6.5 0.5 1 1 46.14 46.226 2 0.029934 12241 20230619_1886_Aki_TMTPro18x_K_F6 70.552 34.672 293010 229010 308020 318480 325140 415750 369590 342310 403020 422330 385450 418300 441390 377720 371710 437100 494320 477500 270980 210420 312080 315420 337950 411110 371040 356920 408270 422470 398950 423260 445560 394200 386310 440360 471660 453170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 269630000 24554 3296 23048 46130;46131 37155 37155 1 9606 Homo sapiens 0.013042684378433478 SGPPAPEEEEEEER Unmodified 1583.6587 0.65872487 4592 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 0 0 0 1 0 1 35.578 35.578 2 9.7284E-06 8212 20230619_1880_Aki_TMTPro18x_K_F1 128.28 108.08 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24555 4592 23049 46132 37156 37156 1 9606 Homo sapiens -0.10975814833773256 SGPPAPEEEEEEERQSGNTEQK Unmodified 2456.0575 0.057534057 4592 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 0 0 1 1 0 1 37.193 37.193 4 6.1628E-23 8860 20230619_1880_Aki_TMTPro18x_K_F1 177.32 160.61 21495 13862 18301 18315 23717 23496 19034 21451 24746 22130 25941 26099 30814 20599 27906 33010 27689 32312 19825 12740 18931 18197 24080 23323 19651 22064 24936 22453 26774 26155 31116 22108 28446 32913 26526 30680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25703000 24556 4592 23050 46133 37157 37157 1 9606 Homo sapiens -0.1122524090656043 SGPPELR Unmodified 754.39735 0.39735263 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 3.5 0.5 1 1 35.544 35.597 2 0.052122 7758 20230619_1883_Aki_TMTPro18x_K_F4 85.265 43.963 77952 48922 76939 78384 93875 106150 86184 90591 120630 87710 111090 110540 114740 92418 92376 80572 123010 113890 71967 45070 78505 77053 96048 104820 88411 93526 120440 89572 114540 110530 115920 95368 95940 83073 117330 107850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63949000 24557 4372 23051 46134;46135 37158 37158 1 9606 Homo sapiens 0.010329846290915157 SGPPPSSGMSSR Unmodified 1145.5135 0.51352137 4096 Q69YJ7;Q9NTZ6;A6PVI1;A6PVI0;Q5JX62 DKFZp667H197;RBM12 RNA-binding protein 12 yes no 0 0 0 6.5 0.5 1 1 30.327 30.394 2 0.028035 5949 20230619_1886_Aki_TMTPro18x_K_F6 68.657 34.404 6098 3804.6 6573.3 7920.4 8533.4 9150.2 6205.3 8677.9 7398.6 5935.5 9094.9 10141 8976.9 7572.2 7669.2 5550.6 10890 10240 5633.9 3518.8 6673.4 7666.9 8645 9140.5 6439 8820.6 7531.2 6272.3 9251.6 10011 9104.8 7793.3 7986.2 5880.3 10383 9678.8 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6404100 24558 4096 23052 46136;46137 37159 37159 1 9606 Homo sapiens -0.05341484653149564 SGPRPPLPPDRPSAGAPPPPPPSTSIR Unmodified 2697.4351 0.43508212 1215 D3DPE6;A0A140VJZ9;O43516-2;O43516;O43516-3;O43516-4 WASPIP;WIPF1 WAS/WASL-interacting protein family member 1 yes no 0 0 2 4 0 1 41.806 41.849 4 0.007066 10361 20230619_1883_Aki_TMTPro18x_K_F4 61.546 48.358 14454 11907 18671 13275 17567 15006 18084 16564 17732 21279 20271 20132 16392 15154 21700 19536 19375 21118 13398 10913 18561 13336 18296 15096 18202 16938 18203 21205 20520 20312 17110 16027 21834 19656 18573 20034 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23655000 24559 1215 23053 46138 37160 37160 1 9606 Homo sapiens 0.1542619861224921 SGPSVPVSVQTK Unmodified 1184.6401 0.6401021 638 B4DMD3;B4DY34;A0A024RAW9;Q9Y2W2 WBP11 WW domain-binding protein 11 yes no 0 0 0 4.5 3.5 1 1 45.153 45.167 3 3.7352E-07 12376 20230619_1880_Aki_TMTPro18x_K_F1 156.14 132.9 270230 187130 250570 265370 324950 330580 318410 314530 372220 270300 328920 340680 337290 301740 331910 301990 359340 312670 249490 172060 257370 262350 331340 328930 323010 321260 374070 277890 340000 341360 343860 312430 338920 304230 343230 297040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 387620000 24560 638 23054 46139;46140 37161;37162;37163 37162 3 9606 Homo sapiens 0.05516764843605415 SGPVILADEIK Unmodified 1140.639 0.63903946 3640 P53367-2;B7ZA10;B4E273;P53367 ARFIP1 Arfaptin-1 yes no 0 0 0 5 0 1 56.175 56.236 2 0.0018521 16347 20230619_1885_Aki_TMTPro18x_K_F5 116.77 65.857 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24561 3640 23055 46141 37164 37164 1 9606 Homo sapiens 0.074345504746816 SGQDPQQEQEQERERDPQQEQER Unmodified 2853.251 0.25098234 4476 Q9BZE9;Q9BZE9-2;Q9BZE9-3;J3QL04;J3QR12;Q9BZE9-4;J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 yes no 0 0 2 1 0 1 28.319 28.319 4 1.0603E-19 5319 20230619_1880_Aki_TMTPro18x_K_F1 165.88 148.09 17817 13289 13453 16141 17691 17110 19193 19932 23080 19987 20822 23264 20736 17978 23066 27370 25077 19505 16433 12195 14108 16081 18077 17299 19379 20165 23195 20295 21490 23297 21285 19196 23547 26903 23935 18629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108900000 24562 4476 23056 46142 37165 37165 1 9606 Homo sapiens -0.10151311137633456 SGQGAFGNMCR Oxidation (M) 1199.4812 0.48117539 3558 Q59GY2;P36578;B4DMJ6;Q53G74;B4DFI6;H3BTP7;H3BU31;B4DP82 RPL4 60S ribosomal protein L4 yes no 0 1 0 5.17 2.27 1 1 1 1 1 1 32.417 32.463 2 0.010438 6590 20230619_1886_Aki_TMTPro18x_K_F6 72.006 53.391 210440 161030 184310 150020 215480 217000 206440 203180 232550 152240 106880 101170 170030 92987 138640 184000 193710 132370 194310 147420 189630 153500 221040 214170 209420 207060 230390 155190 118320 104930 169840 101220 144790 180390 184390 126500 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 621830000 24563 3558 23057 46143;46144;46145;46146;46147;46148 37166;37167;37168;37169;37170;37171;37172 37170 2221 7 9606 Homo sapiens -0.11058595327835974 SGQGAFGNMCR Unmodified 1183.4863 0.48626077 3558 Q59GY2;P36578;B4DMJ6;Q53G74;B4DFI6;H3BTP7;H3BU31;B4DP82 RPL4 60S ribosomal protein L4 yes no 0 0 0 5.33 3.09 1 1 1 38.432 38.449 2 5.744E-12 8633 20230619_1887_Aki_TMTPro18x_K_F7 204.52 190.37 520750 458640 475210 380580 477490 573030 512360 515300 556540 422920 191220 168730 440350 207490 204160 488690 492150 340070 481400 419290 486040 393960 497220 563760 515830 527540 550340 424960 223970 184640 429730 228450 229130 477240 467050 325130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 523200000 24564 3558 23057 46149;46150;46151 37173;37174;37175 37174 3 9606 Homo sapiens -0.09814291465204406 SGQLEVEVIEAR Unmodified 1328.6936 0.69359423 4669 Q9UJD0 RIMS3 Regulating synaptic membrane exocytosis protein 3 yes yes 0 0 0 2 0 1 50.813 50.865 2 0.0052318 14807 20230619_1881_Aki_TMTPro18x_K_F2 83.204 51.71 40586 40205 44126 46656 45191 47736 49026 46743 45158 57799 61483 52746 57916 44221 64920 56361 53143 46368 37605 36841 44561 46612 46910 48185 49112 48124 46922 57635 62124 53511 59493 46550 65193 55920 50914 44171 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65643000 24565 4669 23058 46152 37176 37176 1 9606 Homo sapiens 0.04239517555470229 SGQLNLSGR Unmodified 930.48829 0.4882929 1188 A0A140VJN3;Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes no 0 0 0 1 0 1 37.661 37.661 2 0.011725 9058 20230619_1880_Aki_TMTPro18x_K_F1 82.029 61.888 52220 32445 39189 42505 52650 62502 52563 50719 68782 49057 51392 55007 53267 41895 51755 42383 61938 46672 48114 29821 41124 42343 53717 61391 53471 52576 68406 49894 53655 55091 54229 43692 53154 42863 59057 44340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32772000 24566 1188 23059 46153 37177 37177 1 9606 Homo sapiens 0.020268286065856955 SGQQIVGPPR Unmodified 1037.5618 0.56179219 3993 Q53FE8;Q9UNZ2;Q9UNZ2-5;Q53FF5;F2Z2K0;Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 yes no 0 0 0 7.5 0.5 1 1 36.374 36.401 2 0.0006048 7994 20230619_1888_Aki_TMTPro18x_K_F8 136.57 106.76 38254 28475 29674 38189 39627 47483 49562 43265 60255 50647 57106 48336 58487 44762 38976 64057 58897 50628 35287 26158 31077 37868 40701 47194 49679 44695 60609 50753 58707 49120 58707 47315 41213 63234 56102 48259 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97132000 24567 3993 23060 46154;46155 37178 37178 1 9606 Homo sapiens 0.0445137704903118 SGQVYSFGCNDEGALGR Unmodified 1815.7846 0.78461086 1074 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;P18754-2;C9JW69;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4 RCC1 Regulator of chromosome condensation yes no 0 0 0 4.5 0.5 2 2 49.481 49.537 2;3 4.6878E-23 13557 20230619_1885_Aki_TMTPro18x_K_F5 245.03 220.74 119270 97282 109060 122700 119350 143040 142660 130400 156680 131750 146360 141920 154790 122900 130060 167370 156190 159300 110210 89275 111900 122070 123890 142770 142870 134160 158320 133450 150970 143070 156510 129770 134340 166910 149210 151380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 502730000 24568 1074 23061 46156;46157;46158;46159 37179;37180 37180 2 9606 Homo sapiens -0.09065006529385755 SGRPMASGYGR Unmodified 1137.5349 0.53492552 1708 A0A7P0TAE3;Q9ULX6;A0A7P0TAJ5;A0A140VKH3;Q9ULX6-2;B3KMD4;A0A7P0T847;A0A7P0TBP0;V9GZ50;A0A7P0T9N5;A0A7P0TAD3 AKAP8L A-kinase anchor protein 8-like yes no 0 0 1 2 0 1 28.169 28.244 3 0.061006 5060 20230619_1881_Aki_TMTPro18x_K_F2 53.013 39.976 14122 12097 12677 13448 15745 17947 13330 15135 21137 14121 15960 11780 13245 11348 19219 13699 17988 14641 13051 11086 13048 13530 16071 17743 13822 15620 20861 14273 16480 12068 13891 11849 19338 13799 17199 13908 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6927200 24569 1708 23062 46160 37181 37181 1 9606 Homo sapiens -0.02834054833783739 SGRPSEVDNDQLR Unmodified 1471.7015 0.70153315 2550 B4DND2;Q96H41;Q53H47-3;Q53H47;B9ZVV8 SETMAR Histone-lysine N-methyltransferase SETMAR;Histone-lysine N-methyltransferase;Transposon Hsmar1 transposase yes no 0 0 1 2.5 0.5 1 1 31.008 31.084 3 3.8270999999999996E-21 6129 20230619_1881_Aki_TMTPro18x_K_F2 207.97 169.98 51651 40183 46738 45340 86827 97157 53113 51397 64222 52463 63510 61143 63963 52143 51268 67451 75701 64275 47708 36842 48471 46010 86161 93262 55847 55670 64776 53299 65180 61415 64676 54891 53788 67310 72115 61124 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54249000 24570 2550 23063 46161;46162 37182;37183 37182 2 9606 Homo sapiens -0.015449551950496243 SGSAAQAEGLCK Unmodified 1177.5397 0.53973612 3088 H7C0X4;Q92685;F8WF93;H7BZZ2;F8WE30 ALG3 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase yes no 0 0 0 5 0 1 39.932 40.021 2 0.00020269 9541 20230619_1885_Aki_TMTPro18x_K_F5 116.77 64.911 6199.7 2403 8568.5 6561.7 9812.9 12036 8178.5 11516 6384 8052.6 8808.8 13880 12454 9549.8 9009.3 6427.4 14500 11602 5731.9 2240.7 8514.6 6352.5 10048 11728 8301.6 11693 6716.8 8489.1 9117 13654 12428 9836.5 9507.1 6809.3 13800 10975 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10076000 24571 3088 23064 46163 37184 37184 1 9606 Homo sapiens -0.04193215481700463 SGSAPQSPGASIR Unmodified 1213.6051 0.60511357 4308 Q92859-3;Q92859-2;Q92859-4;Q92859 NEO1 Neogenin yes no 0 0 0 7 0 1 33.338 33.421 2 0.0020083 6693 20230619_1887_Aki_TMTPro18x_K_F7 94.616 69.179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24572 4308 23065 46164 37185 37185 1 9606 Homo sapiens 0.006855220356555947 SGSGTMNLGGSLTR Oxidation (M) 1352.6354 0.63542742 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;B1AK85 CAPZB F-actin-capping protein subunit beta yes no 0 1 0 5.33 3.09 1 1 1 37.858 37.874 2 9.0225E-05 8584 20230619_1888_Aki_TMTPro18x_K_F8 107.09 89.272 160480 125090 139870 158030 160180 156220 174920 167730 186770 192370 220190 215470 223710 181170 183780 248370 234120 224410 148190 114810 144200 156870 165040 158430 175880 171260 190940 193760 224420 216660 226280 191550 190720 246970 223450 213440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 490900000 24573 1434 23066 46165;46166;46167 37186;37187;37188 37188 920 3 9606 Homo sapiens -0.026784873614587923 SGSGTMNLGGSLTR Unmodified 1336.6405 0.6405128 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;B1AK85 CAPZB F-actin-capping protein subunit beta yes no 0 0 0 1.5 0.5 1 1 43.793 43.834 2 1.5828E-21 11773 20230619_1880_Aki_TMTPro18x_K_F1 247.88 209.1 309750 251150 269450 310150 258120 308190 309400 294110 328190 395780 368140 369940 420200 328170 349150 433120 423040 402970 286090 230430 277180 308310 270650 311460 309620 304220 335280 393640 378090 375320 423680 345570 360820 431620 403900 383140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 581380000 24574 1434 23066 46168;46169 37189;37190 37189 2 9606 Homo sapiens -0.01434183498827224 SGSILTSP Unmodified 760.39668 0.39668393 2960 F5GX09;Q5HYJ3 FAM76B Protein FAM76B yes no 0 0 0 5 0 1 48.945 49.022 2 0.010659 13333 20230619_1885_Aki_TMTPro18x_K_F5 98.133 58.591 38718 32952 36456 34213 39271 39330 40724 36881 49412 46512 49634 45290 49375 43483 45111 47836 54374 50199 35793 30180 37245 34541 40592 39357 41241 38110 49851 46471 50870 45982 50216 45145 46471 48129 51906 47670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25441000 24575 2960 23067 46170 37191 37191 1 9606 Homo sapiens 0.006901451893895683 SGSLDDSFSDFQELPASSK Unmodified 2015.896 0.89599502 113 A0A024R0X0;Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 AP1GBP1;SYNRG Synergin gamma yes no 0 0 0 4 0 1 60.524 60.526 3 0.014712 18567 20230619_1883_Aki_TMTPro18x_K_F4 51.971 41.775 18218 17055 18348 22686 16370 24195 22182 21258 22848 22211 26498 21470 27864 20700 22868 28179 25685 25751 16862 15653 18635 22455 17360 24264 22052 21953 23373 22378 27036 21839 28136 21786 23527 28045 24549 24484 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16013000 24576 113 23068 46171 37192 37192 1 9606 Homo sapiens -0.07131713411104101 SGSLENVPNVGVNK Unmodified 1412.726 0.72595699 1174 P53004;A0A140VJF4 BLVRA Biliverdin reductase A yes no 0 0 0 7 0 1 49.245 49.329 3 9.5238E-07 13242 20230619_1887_Aki_TMTPro18x_K_F7 126.21 110.32 234830 184640 197020 263300 259520 283570 253660 239110 283560 250020 305490 276850 298730 270740 280050 333460 291340 299510 216800 169690 204630 259480 264550 284130 256970 247760 287920 253060 311910 279940 304310 282640 286030 332050 278700 284810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1106600000 24577 1174 23069 46172 37193 37193 1 9606 Homo sapiens 0.03610304958465349 SGSMATAEASGSDGK Acetyl (Protein N-term);Oxidation (M) 1412.5726 0.57255239 1752 A0A8I5KX20;A0A8I5QJ67;A0A8I5KSY3;D6RFH4;A0A8I5KP74;H3BUX2;A0A8I5QKN7;A0A8I5KYK4;J3QR91;A0A8I5KSY8;O43169 CYB5B Cytochrome b5 type B yes no 1 1 0 1 0 1 35.637 35.637 2 1.367E-19 8229 20230619_1880_Aki_TMTPro18x_K_F1 103.34 99.641 33426 17708 26958 28626 29041 33101 29366 36989 47794 31195 37788 49765 49241 38509 34396 39621 59272 53214 30791 16330 27963 28063 30073 33197 30170 37346 47196 32424 39801 49263 49197 40175 36631 40543 56428 50421 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87514000 24578 1752 23070 46173 37194 37194 1145 1 9606 Homo sapiens -0.11723097940171101 SGSMATAEASGSDGK Acetyl (Protein N-term) 1396.5776 0.57763777 1752 A0A8I5KX20;A0A8I5QJ67;A0A8I5KSY3;D6RFH4;A0A8I5KP74;H3BUX2;A0A8I5QKN7;A0A8I5KYK4;J3QR91;A0A8I5KSY8;O43169 CYB5B Cytochrome b5 type B yes no 1 0 0 1 0 1 41.499 41.499 2 4.4504E-25 10744 20230619_1880_Aki_TMTPro18x_K_F1 127.42 127.42 70473 47268 68494 76930 67430 89095 72004 73037 111280 97595 92396 116330 127240 110890 78119 93184 148560 137020 65076 43542 69793 75347 70446 88725 73543 76392 110400 97962 97302 116910 126520 113690 84251 96342 141380 129720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149890000 24579 1752 23070 46174 37195 37195 1 9606 Homo sapiens -0.10478794077539533 SGSMDPSGAHPSVR Oxidation (M) 1399.615 0.61502633 3807 Q07666;B4DDX2;B2R7B5;Q07666-2;Q07666-3 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 0 1 0 8 0 1 27.107 27.141 3 0.0019133 4661 20230619_1888_Aki_TMTPro18x_K_F8 71.879 63.968 1604.5 819.7 1807 2053 2898.1 2238.6 1481.5 2052.9 2023.5 1764.3 2660.9 1946.7 1365.9 2850.8 1689.9 1575.5 2399.6 2590 1481.7 761.53 1834.6 1971.5 2879.1 2245.5 1595.6 2101.1 2054.6 1806 2638.3 2000.9 1462.5 2837.5 1751.4 1661.6 2290.4 2448.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1171100 24580 3807 23071 46175 37196 37196 2482 1 9606 Homo sapiens -0.0687965802128474 SGSMDPSGAHPSVR Unmodified 1383.6201 0.62011171 3807 Q07666;B4DDX2;B2R7B5;Q07666-2;Q07666-3 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 0 0 0 8 0 1 31.889 31.894 3 9.6602E-07 6305 20230619_1888_Aki_TMTPro18x_K_F8 125.93 109.79 11067 9409.4 13177 12927 15203 20657 13542 13926 14113 13132 11531 16839 15910 11063 15732 11132 15758 16759 10252 8641.5 13243 12858 15611 20132 13772 14668 14255 13429 12187 16702 16074 11624 15975 11515 15084 15854 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8275000 24581 3807 23071 46176 37197 37197 1 9606 Homo sapiens -0.05635354158653172 SGSPTVPIK Unmodified 884.49673 0.49673232 1836 E9PBG7;Q13557-6;A0A994J5B0;D6R938;A0A8V8TNA7;A0A8V8TN65;A0A8V8TND4;Q13557-10;Q13557-8;E9PF82;Q13557-11;Q13557;B7Z2B0;A0A8V8TPK3;Q13557-3;Q13557-5;Q13557-9;Q13557-4;H0Y9J2 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 8 0 1 43.369 43.38 2 0.012724 10852 20230619_1888_Aki_TMTPro18x_K_F8 80.219 33.225 49396 38517 50269 52142 62782 62799 66954 63892 73558 69275 76897 78211 85237 70044 69250 69482 96376 84126 45668 35380 51194 51675 64275 62724 67455 65338 74694 70002 79101 78697 85976 72524 72187 70660 91865 79793 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17616000 24582 1836 23072 46177 37198 37198 1 9606 Homo sapiens 0.049863825231909686 SGSPVATFK Unmodified 892.46543 0.46543219 2321 Q8TCJ8;Q8NCK5;B2RDP6;Q9BQ67;B4DTI1 DKFZp564C172;GRWD1 Glutamate-rich WD repeat-containing protein 1 yes no 0 0 0 1.5 0.5 1 1 45.596 45.637 2 0.00072117 12562 20230619_1880_Aki_TMTPro18x_K_F1 138.98 72.293 143830 113770 135350 142290 161970 184080 164520 160150 205610 194470 209130 208560 216240 172160 194980 233120 231580 215620 132900 104410 138650 141880 166320 182410 166980 166160 207280 195170 214690 209910 219420 182030 200860 232200 221110 205040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81882000 24583 2321 23073 46178;46179 37199;37200 37199 2 9606 Homo sapiens 0.01489809489100935 SGSSGTPYLGSK Acetyl (Protein N-term) 1181.5564 0.55643205 4460 Q9BX40;Q5TBQ0;Q9BX40-2;Q5TBQ1;A0A0C4DFV2 LSM14B Protein LSM14 homolog B yes no 1 0 0 5 0 1 47.386 47.463 2 1.021E-12 12666 20230619_1885_Aki_TMTPro18x_K_F5 127.4 108.3 56938 44408 43636 52458 55531 63142 56236 47627 62292 65133 66467 71413 74458 63703 60365 78273 91051 78608 52532 40734 45669 52436 56811 62690 56823 50228 63321 65098 68372 71943 75107 66732 63416 78389 86735 74705 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114280000 24584 4460 23074 46180 37201 37201 1 9606 Homo sapiens -0.027083913240858237 SGSTLDGVSR Unmodified 977.47779 0.47778779 879 A0A087X0M4;A0A8Q3WKX9;Q9BWU0;A0A087WWF4;A0A8Q3WLG9;B4DV74;A0A8Q3WKX3 SLC4A1AP Kanadaptin yes no 0 0 0 3.5 0.5 1 1 34.375 34.431 2 1.6614E-09 7308 20230619_1883_Aki_TMTPro18x_K_F4 204.79 166 44729 22045 52023 54053 66843 78494 52739 57347 63858 46757 67487 68794 64745 60641 62039 34902 83615 75844 41313 20477 52474 52192 67916 76950 54368 59756 64503 48543 68960 68517 66091 61489 64161 37874 79740 71632 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79406000 24585 879 23075 46181;46182 37202 37202 1 9606 Homo sapiens -0.011851988385046752 SGSWAAIYQDIR Unmodified 1365.6677 0.66771383 2028 P18031;A8K3M3 PTPN1 Tyrosine-protein phosphatase non-receptor type 1;Tyrosine-protein phosphatase non-receptor type yes no 0 0 0 8 0 1 59.01 59.051 2 2.212E-09 17401 20230619_1888_Aki_TMTPro18x_K_F8 181.68 143.39 61622 51596 55376 68249 47940 66218 66598 67795 73486 60547 51152 51918 61383 53281 67897 63757 64931 65321 56940 47368 56762 67508 51005 67103 66271 68965 73566 61342 54022 53157 62652 55482 68739 64004 62156 62024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26804000 24586 2028 23076 46183 37203 37203 1 9606 Homo sapiens -0.000493318961616751 SGTAETEPVEQDSSQPSLPLVR Unmodified 2326.1288 0.12884851 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B7Z3E7;A8KA50;C9JXV0;H7C3N7 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 2 0 1 51.264 51.309 3 9.667799999999999E-38 15037 20230619_1881_Aki_TMTPro18x_K_F2 230.67 213.6 15996 16429 15673 15791 16915 19062 17711 15757 20221 22889 21541 18070 22254 19162 19890 21934 23169 24472 14812 15028 15968 16052 17498 18964 17887 16517 20529 22609 22046 18607 22581 19887 20460 22132 22146 23212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51665000 24587 1984 23077 46184 37204 37204 1 9606 Homo sapiens 0.01882923588709673 SGTDVDAANLR Unmodified 1117.5364 0.53636531 3580 P42574;C9JXR7;Q5HYI3;A8MVM1 CASP3;DKFZp686N1815 Caspase-3;Caspase-3 subunit p17;Caspase-3 subunit p12 yes no 0 0 0 2.5 0.5 1 1 37.892 37.95 2 6.2638E-17 8760 20230619_1882_Aki_TMTPro18x_K_F3 250.49 216.69 337920 268610 296500 308640 354780 358130 428580 427540 555100 439830 392420 375390 513160 346460 342410 476290 481660 403560 312090 246300 305640 309240 365880 360090 431470 432110 551720 442070 415240 383210 511380 365580 359560 472070 458960 384360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 221580000 24588 3580 23078 46185;46186 37205;37206 37206 2 9606 Homo sapiens -0.017701422640584497 SGTEDLRTER Unmodified 1162.5578 0.55782903 1221 A8K930;A0A140VK17;Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 EHBP1 EH domain-binding protein 1 yes no 0 0 1 2 0 1 28.77 28.842 3 0.00039572 5278 20230619_1881_Aki_TMTPro18x_K_F2 113.46 78.045 14973 9514.7 16490 16377 23654 17495 17344 18909 16322 17010 26616 25228 20250 17464 20059 12194 30232 23876 13837 8773.5 16719 15984 23756 17651 17840 19169 17088 17529 26534 24964 20866 18004 20914 13019 28783 22577 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14462000 24589 1221 23079 46187 37207 37207 1 9606 Homo sapiens -0.016947572353274154 SGTGIAAMSVMRPEQIMK Oxidation (M) 1921.9424 0.94237383 3512 P27449 ATP6V0C V-type proton ATPase 16 kDa proteolipid subunit yes yes 0 1 1 2 0 1 49.937 49.996 3 0.028124 14439 20230619_1881_Aki_TMTPro18x_K_F2 52.862 31.909 46251 39598 46463 56658 48492 48317 45982 53977 52281 46176 58822 54298 59006 45562 49956 64147 54193 56847 42781 36382 47259 55686 50105 49620 46748 54548 53138 47324 60010 54527 59751 48270 51273 63711 51829 54061 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47924000 24590 3512 23080 46188 37208 37208 2178 1 9606 Homo sapiens 0.018280334139944898 SGTGIAAMSVMRPEQIMK Unmodified 1905.9475 0.9474592 3512 P27449 ATP6V0C V-type proton ATPase 16 kDa proteolipid subunit yes yes 0 0 1 4 0 1 55.302 55.313 3 3.0458E-10 16358 20230619_1883_Aki_TMTPro18x_K_F4 143.43 127.59 51403 37264 54930 61281 48742 56906 61007 61523 64612 64630 57811 56648 76316 59286 57531 68741 66975 66038 47524 34320 55459 59825 51453 57941 60924 62622 65388 64909 60428 57973 76377 61603 59412 68746 63983 62755 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18840000 24591 3512 23080 46189 37209 37209 1 9606 Homo sapiens 0.03072337276626058 SGTLACTGSLVNNTANDR Unmodified 1849.8588 0.85883843 2782 CON__P15636 yes yes 0 0 0 6.6 1.02 1 1 2 1 44.78 44.85 3 2.7539E-100 11211 20230619_1887_Aki_TMTPro18x_K_F7 284.24 262.16 + 129190 81910 117440 118740 164830 158770 156070 156450 198070 137530 166710 166190 152280 145830 165100 164680 153810 152690 119200 75364 120980 117390 167130 157460 159100 159450 197930 141000 171920 166790 156590 151970 167040 164550 147270 145160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 13650000000 24592 2782 23081 46190;46191;46192;46193;46194 37210;37211;37212;37213 37212 4 -0.03209663437837662 SGTLACTGSLVNNTANDRK Unmodified 1977.9538 0.95380145 2782 CON__P15636 yes yes 0 0 1 2.5 1.12 1 1 1 1 43.396 43.437 3 1.2277E-72 11373 20230619_1881_Aki_TMTPro18x_K_F2 327.71 295.64 + 862240 510440 704300 692370 1169400 887030 921910 1083200 1214400 978830 1172700 1362700 694200 883050 587880 1572500 838930 1211400 794710 469460 734980 687100 1168900 887510 953030 1089400 1217900 1006200 1185000 1350400 721020 960670 619370 1545800 802840 1153000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9741600000 24593 2782 23082 46195;46196;46197;46198 37214;37215;37216;37217 37214 4 0.0039427003334822075 SGTMNSYEMR Unmodified 1174.4747 0.47469303 4021 Q59EF6;B4E1R7;B2RCM3;P17655;B4DN77;P17655-2;B3KUH9 CAPN2 Calpain-2 catalytic subunit yes no 0 0 0 4 0 1 38.413 38.456 2 0.0011192 8926 20230619_1883_Aki_TMTPro18x_K_F4 112.13 105.6 19780 14601 20035 20553 22813 24193 22882 25705 24710 24749 29061 29982 27592 25086 25505 27216 35537 32113 18281 13421 20375 20314 23468 24217 23138 26120 25242 25215 29553 30033 28129 26148 26532 27585 33881 30462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7219200 24594 4021 23083 46199 37218 37218 1 9606 Homo sapiens -0.10556533279191171 SGTQDIQPGPLFNNNADGVATDITSTR Unmodified 2788.3264 0.32637912 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;A0A7P0T8C6;Q7Z2W4-3;Q05DV5 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 0 5 0 1 58.673 58.729 3 8.6625E-39 17357 20230619_1885_Aki_TMTPro18x_K_F5 203.72 197.43 13343 9782.9 14948 11519 9160.3 12875 12695 13830 14294 14463 10465 12485 17113 11586 12104 17426 14601 16680 12342 8975.3 14946 11521 10086 12932 12656 14072 14335 14520 11219 12734 17001 12306 12563 17357 13960 15843 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36281000 24595 2740 23084 46200 37219 37219 1 9606 Homo sapiens 0.003748980607269914 SGTSEFLNK Unmodified 981.47673 0.47672516 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;A0A7P0TBC2;Q96GW1;A0A7P0T885;A0A7P0T8R3 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 6 0.816 1 1 1 46.439 46.522 3 5.7795E-05 12318 20230619_1886_Aki_TMTPro18x_K_F6 144.12 111.99 289190 216390 234760 266010 331990 350240 337610 340280 400990 310670 352800 358170 370260 307370 348920 409910 392090 359210 266840 198600 244670 265650 337380 347550 341890 347440 402730 317170 365060 359970 376350 324060 357890 407280 374500 341840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1215800000 24596 3452 23085 46201;46202;46203 37220;37221;37222 37221 3 9606 Homo sapiens -0.014754132074131121 SGTSSPQSPVFR Unmodified 1248.6099 0.6098646 4233 Q8N556-2;Q8N556;Q6ZRV0 AFAP1 Actin filament-associated protein 1 yes no 0 0 0 8 0 1 38.73 38.717 2 1.217E-06 8953 20230619_1888_Aki_TMTPro18x_K_F8 157.24 134.5 23431 9261.6 12254 13123 5469.2 6763.4 7348.4 6318.3 9726.2 21550 33059 32655 24170 26466 36217 32112 37737 35070 21510 8544.2 13273 12852 6311.7 7314.8 7403.1 6914.3 10712 21280 32447 32446 25557 27769 36677 32358 36073 33289 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60577000 24597 4233 23086 46204 37223 37223 1 9606 Homo sapiens -0.004495938215768547 SGTTPKPVINSTPGR Unmodified 1510.8104 0.81035532 2446 Q99459;B3KY60;B4DSH1 CDC5L Cell division cycle 5-like protein yes no 0 0 1 3.5 0.5 1 1 38.204 38.252 3 0.023967 8910 20230619_1882_Aki_TMTPro18x_K_F3 57.973 44.569 32772 23637 34033 35504 42367 42229 42110 37329 42351 37276 49057 39819 37272 32316 40217 29316 42642 34058 30290 21745 34599 34952 43290 42078 42476 38487 43360 37762 49444 40067 38552 33427 40913 29817 40716 32330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98432000 24598 2446 23087 46205;46206 37224 37224 1 9606 Homo sapiens 0.07538255775193647 SGTVDPQELQK Unmodified 1200.5986 0.59863121 2734 C9J0K6;P30626-2;P30626;P30626-3 SRI Sorcin yes no 0 0 0 4 0 1 44.628 44.672 2 0.00056248 11565 20230619_1883_Aki_TMTPro18x_K_F4 137.46 101.58 107230 85835 109500 116220 145600 153280 124530 129970 163360 151710 164490 183680 158770 141950 158310 158560 201550 178190 99160 78835 111610 115310 147810 151640 128000 134940 164280 153160 168600 183500 162300 148650 163360 160190 192260 169120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116020000 24599 2734 23088 46207 37225 37225 1 9606 Homo sapiens 0.006355840842843463 SGTYLQGTFR Unmodified 1128.5564 0.55637247 2170 A8QI98;Q9Y2L1;Q49AG4;G3V1J5;Q9Y2L1-2;F2Z2C0 DIS3 Exosome complex exonuclease RRP44 yes no 0 0 0 2 0 1 45.143 45.225 2 0.0040341 12244 20230619_1881_Aki_TMTPro18x_K_F2 92.538 72.902 105890 97329 104320 107490 123840 129780 126360 120440 138200 77359 77874 75385 80704 64986 102660 79472 82525 67334 97974 89166 106420 108050 127100 129360 127570 122550 137550 80542 82917 76320 83306 68142 102760 79038 79049 64138 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74028000 24600 2170 23089 46208 37226 37226 1 9606 Homo sapiens -0.002763465334282955 SGVAITFLTK Unmodified 1035.5964 0.59644637 117 A0A8V8TR86;B3KY11;A8KA56;A0A024R0Z3;Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 yes no 0 0 0 4 0 1 59.882 59.884 2 9.6579E-07 18238 20230619_1883_Aki_TMTPro18x_K_F4 205.83 142.41 102910 92343 92677 98339 97701 113840 113140 109680 110520 94586 100640 83830 96060 84531 103500 95519 102850 99229 95138 84578 95122 99065 101540 113860 113090 111930 112290 96105 103450 85701 98558 87766 105030 96052 98388 94222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59718000 24601 117 23090 46209 37227 37227 1 9606 Homo sapiens 0.08007200137126347 SGVDADSSYFK Unmodified 1174.5142 0.51423288 4717 Q9Y394-2;Q9Y394 DHRS7 Dehydrogenase/reductase SDR family member 7 yes no 0 0 0 4.5 0.5 1 1 48.606 48.663 3 6.6856E-05 13348 20230619_1883_Aki_TMTPro18x_K_F4 107.06 82.674 153210 117700 128850 151750 152520 223090 170490 176270 251250 144530 143590 159280 171140 145610 134300 204970 177720 182880 141430 108060 133500 151290 157690 218910 173230 182410 246780 148500 153650 160680 172160 153740 140000 203560 169660 173910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161000000 24602 4717 23091 46210;46211 37228 37228 1 9606 Homo sapiens -0.06604366732494782 SGVFNVSELVR Unmodified 1205.6404 0.64043645 946 U3KQE8;A0A0A0MRX8;A0A1B0GU97;Q5VW28;A0A1B0GW37;A0A1B0GWI9;Q5VW27;Q5VW30;Q5VW26;O00712;A0A2R8Y7V8;O00712-4;O00712-5;A0A1B0GWJ4;A0A1B0GVN4;A0A1B0GTC1;B4DS74;A0A1B0GWB8 NFIB Nuclear factor 1;Nuclear factor 1 B-type yes no 0 0 0 1 0 1 58.229 58.229 2 7.773E-06 17747 20230619_1880_Aki_TMTPro18x_K_F1 160.18 111.62 100410 79779 91744 86766 81144 91681 111340 109520 110190 104200 115920 106650 109560 92899 121550 118960 120320 121560 92762 73116 93745 87197 85937 92762 110490 110500 112500 105640 118370 107770 112580 97669 123310 119280 115140 115430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 262510000 24603 946 23092 46212 37229 37229 1 9606 Homo sapiens 0.04584184563464078 SGVGNIFIK Unmodified 933.52837 0.5283668 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;P11940-2;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;A0A024R9E2;E5RJB9;Q4VXU2;E5RGH3;A0A6Q8JFT6;E5RH24;Q4VXU2-2;A0A6Q8JFV4;Q96DU9-2;B4DM75;Q96DU9 PABPC1;PABPC1L;PABPC5 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 5 yes no 0 0 0 3.5 0.5 1 1 54.72 54.767 2 7.4023E-07 16109 20230619_1883_Aki_TMTPro18x_K_F4 169.09 51.693 221720 185730 201060 190340 202420 230970 226030 223680 245030 278240 263070 200620 322060 218280 223760 319710 261490 250290 204900 170100 205930 192530 210890 230390 227170 230360 249530 275900 271110 208150 321770 230180 231870 315470 249750 238500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1326200000 24604 566 23093 46213;46214 37230;37231 37231 2 9606 Homo sapiens 0.05894375277136987 SGVGNVFIK Unmodified 919.51272 0.51271674 1667 Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;B1ANR1;H0YEQ8 PABPC4 Polyadenylate-binding protein 4;Polyadenylate-binding protein no no 0 0 0 2.5 0.5 1 1 51.513 51.568 2 0.00058056 14844 20230619_1882_Aki_TMTPro18x_K_F3 130.75 49.451 436160 378320 389260 455740 417960 486230 487560 489240 563100 508890 540600 534870 604390 501140 499200 635900 571150 604500 403090 346940 400240 454280 434100 489400 489850 500140 568360 514160 558390 540980 609790 525190 514210 634690 546010 574370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 267220000 24605 1667 23094 46215;46216 37232;37233 37233 2 9606 Homo sapiens 0.049740887600819406 SGVGTALLLK Unmodified 957.58588 0.58588168 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 2.5 0.5 1 1 55.698 55.729 2 0.00025777 16643 20230619_1882_Aki_TMTPro18x_K_F3 134.91 100.83 220590 127750 185780 182280 128800 228270 158100 134530 224830 125790 125010 104020 180490 111510 112370 200310 152760 137140 203330 117570 190800 180090 140000 224910 159750 143810 221000 127290 135150 107150 179020 119590 118170 196050 145660 130980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 478800000 24606 1817 23095 46217;46218 37234 37234 1 9606 Homo sapiens 0.10539217482710228 SGVISGGASDLK Unmodified 1089.5666 0.5666028 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;A8K7A6;B7Z709 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 6.5 0.5 1 1 45.96 46.047 2 1.1871E-06 11740 20230619_1887_Aki_TMTPro18x_K_F7 184.36 115.45 190640 153420 171010 190990 183390 214880 199490 197660 230420 235430 264200 251500 256790 213380 216520 274510 285410 263120 176110 140780 175670 190080 190120 215060 201200 204140 234340 236400 269010 253400 260420 224600 225000 274070 272260 250110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 292720000 24607 1432 23096 46219;46220 37235;37236 37236 2 9606 Homo sapiens 0.0254021640114388 SGVLDTLTK Unmodified 932.51786 0.51786169 819 Q6IB68;A0A087WV05;Q99417;A0A0D9SEI7 MYCBP C-Myc-binding protein yes no 0 0 0 7.5 0.5 1 1 52.382 52.457 2 0.0014467 14614 20230619_1888_Aki_TMTPro18x_K_F8 115.71 84.342 68109 53780 60777 84382 56514 76132 65210 76555 84801 84072 88967 95155 104720 79481 74096 124820 95253 96284 62908 49483 62441 82519 59434 77548 65894 78385 85462 84890 91772 95636 104880 84885 77338 122950 90940 91750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117930000 24608 819 23097 46221;46222 37237 37237 1 9606 Homo sapiens 0.048903478320426075 SGVSLAALK Unmodified 844.50182 0.5018177 1927;3462;3463 Q4VB24;A3R0T8;P10412;A3R0T7;B2R984;P16402;P16403 HIST1H1E;HIST1H1D;HIST1H1C Histone H1.4;Histone H1.3;Histone H1.2 no no 0 0 0 2 0.816 2 2 2 52.033 52.068 2;3 0.00018631 15036 20230619_1882_Aki_TMTPro18x_K_F3 160.88 103.6 8781500 8065300 6923500 6006200 10894000 17761000 9344400 9641000 21179000 260650 81198 334100 286680 353360 2771600 443330 485140 214170 8112000 7367200 7249500 6391500 11037000 16869000 9854000 10150000 19992000 821890 1002100 344140 411650 367600 2635300 438840 484410 206840 3 3 3 3 3 3 3 3 3 3 2 3 3 3 3 3 3 3 9140400000 24609 1927;3462;3463 23098 46223;46224;46225;46226;46227;46228 37238;37239;37240 37240 3 9606 Homo sapiens 0.07334686385809164 SGVTIQESGR Unmodified 1032.52 0.51998696 4686 Q9UMS6-4;Q9UMS6-2;B9EG60 SYNPO2 Synaptopodin-2 yes no 0 0 0 4 0 1 34.229 34.28 2 0.00029736 7252 20230619_1883_Aki_TMTPro18x_K_F4 132.88 95.811 16591 12603 21481 21647 37528 38808 29119 33771 42010 26366 28547 36291 41182 33206 26995 27594 50606 50118 15372 11611 21657 21325 37474 37809 30235 34620 41507 27382 30511 36257 40976 34100 28999 29075 48188 47366 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21872000 24610 4686 23099 46229 37241 37241 1 9606 Homo sapiens 0.005027765698514486 SGVYQHVTGEMMGGHAIR 2 Oxidation (M) 1960.8884 0.88836442 226 P07858;E9PHZ5;A0A024R374;A8K2H4;B4DL49;A0A7I2YQK9;A0A7I2V668;A0A7I2V440;E9PSG5;A0A7I2V4Z9;B4DMY4;B3KUJ8;Q6LAF9;R4GMQ5;A0A7I2V367 CTSB Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes no 0 2 0 6.5 0.5 1 1 33.529 33.591 4 7.1824E-05 6767 20230619_1887_Aki_TMTPro18x_K_F7 87.287 78.033 35426 25997 48509 46093 61495 61410 55780 65400 60485 50107 53677 54144 50408 44343 54732 45893 58954 55907 32837 23966 48366 45082 62603 61000 56744 66077 61064 51577 55270 54447 51773 46155 55760 46686 56345 53006 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27049000 24611 226 23100 46230;46231 37242;37243 37242 136;137 2 9606 Homo sapiens -0.05364422693355664 SGVYQHVTGEMMGGHAIR Oxidation (M) 1944.8934 0.8934498 226 P07858;E9PHZ5;A0A024R374;A8K2H4;B4DL49;A0A7I2YQK9;A0A7I2V668;A0A7I2V440;E9PSG5;A0A7I2V4Z9;B4DMY4;B3KUJ8;Q6LAF9;R4GMQ5;A0A7I2V367 CTSB Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes no 0 1 0 7.67 0.471 1 2 37.832 37.845 4 2.0059E-13 8252 20230619_1888_Aki_TMTPro18x_K_F8 150.91 135.72 75154 52787 77208 79797 101400 113040 104880 96666 98895 79765 100950 105360 92198 73354 98689 74786 115860 106550 69447 48570 78658 78757 103460 111350 105330 99447 101080 82311 103160 104680 94665 76854 101040 76985 110620 100900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 99972000 24612 226 23100 46232;46233;46234 37244;37245;37246 37245 136;137 3 9606 Homo sapiens -0.0412011883076957 SGWADERGGEGDGR Acetyl (Protein N-term) 1489.6182 0.61819745 3844 Q13242;A8K3M9;S4R3G0;B4DFT9 SRSF9 Serine/arginine-rich splicing factor 9 yes no 1 0 1 1 0 1 34.397 34.397 2 0.00042758 7739 20230619_1880_Aki_TMTPro18x_K_F1 42.395 34.749 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24613 3844 23101 46235 37247 37247 1 9606 Homo sapiens -0.10702691642904938 SGWESYYK Acetyl (Protein N-term) 1060.4502 0.45017606 150 A0A024R1N4;P12956;P12956-2;B2RDN9;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 1 0 0 4 0.816 1 1 1 58.266 58.296 2 0.0027534 17585 20230619_1883_Aki_TMTPro18x_K_F4 57.559 51.733 498460 455860 486550 473160 457340 580490 546720 548180 607350 649890 605380 620400 670880 578170 658400 689660 712510 697320 461160 417410 494850 478140 480390 578120 548050 564810 615630 650420 624320 629660 682150 603740 672860 691620 681100 662290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1272700000 24614 150 23102 46236;46237;46238 37248;37249;37250 37249 3 9606 Homo sapiens -0.0776310209876101 SGYAIQADEEQLR Unmodified 1478.7001 0.70013617 1804 B4DRV5;A0A8Q3WLP2;Q53FD7;Q53H29;A0A8Q3WKJ4;Q7Z3B4-3;Q7Z3B4;A0A8Z5F6C8;Q7Z3B4-2;Q9NSY5;A0A8Q3WKK2 NUP54;DKFZp434L1613 Nucleoporin p54 yes no 0 0 0 2 0 1 45.336 45.418 2 2.1832E-07 12319 20230619_1881_Aki_TMTPro18x_K_F2 177.83 131.37 49283 48538 46522 58532 51724 54987 52120 51654 60548 68280 67658 65556 64213 58246 68209 69901 65757 71351 45608 44494 47635 58230 53324 55815 52800 53461 61535 68023 68932 66423 65851 60932 69167 70137 62978 67734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92726000 24615 1804 23103 46239 37251 37251 1 9606 Homo sapiens -0.020065892838147192 SGYFALGNEK Unmodified 1084.5189 0.51892433 2289 B2RAX6;Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 0 0 0 7.5 0.5 1 1 51.393 51.47 2 0.00046253 14142 20230619_1888_Aki_TMTPro18x_K_F8 144.77 107.04 182650 136830 158680 169550 161720 186320 171220 169980 195530 165220 156500 132340 156810 129760 164280 181800 170640 142010 168620 125590 163290 168760 168140 186740 172850 174660 196220 166320 162300 135920 160390 136680 167360 179590 163010 135400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57409000 24616 2289 23104 46240;46241 37252;37253 37253 2 9606 Homo sapiens -0.019954377990416106 SGYFDER Unmodified 872.36645 0.36644643 3442 P12532;P12532-2;F8WCN3;B4DH34;E9PCP8;B4DGR9;C9JSQ1;B4DF55;C9J6W7;C9JT96 CKMT1A;CKMT1B Creatine kinase U-type, mitochondrial yes no 0 0 0 2.5 0.5 1 1 39.484 39.546 2 0.011039 9578 20230619_1881_Aki_TMTPro18x_K_F2 117.18 31.87 622240 499020 589370 578420 280340 318760 422930 425440 505900 665490 853220 858370 768050 719700 747620 798450 953600 829280 575050 457600 596570 574620 319760 344780 421580 434220 524550 665140 855320 857930 786110 750680 772180 802780 909540 787780 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 525710000 24617 3442 23105 46242;46243 37254;37255;37256 37254 3 9606 Homo sapiens -0.07484213475800061 SGYGFNEPEQSR Unmodified 1369.5899 0.58985744 4029 Q5BKZ1 ZNF326 DBIRD complex subunit ZNF326 yes yes 0 0 0 3 0 1 40.388 40.445 2 2.3864E-17 9773 20230619_1882_Aki_TMTPro18x_K_F3 223.77 212.67 138230 101930 118450 130700 127690 138320 144240 137730 144410 188800 187910 179610 202960 160940 157570 221580 199330 188950 127580 93595 122190 129720 132340 139290 144510 142110 149060 187700 191310 182200 204440 169850 163680 219680 190250 179850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 131380000 24618 4029 23106 46244 37257;37258 37258 2 9606 Homo sapiens -0.08015389552201668 SGYGPSDGPSYGR Unmodified 1298.5527 0.55274365 2279 B2RA34;O95429-2;O95429 BAG4 BAG family molecular chaperone regulator 4 yes no 0 0 0 4.5 0.5 1 1 37.399 37.492 2 6.1007E-11 8486 20230619_1885_Aki_TMTPro18x_K_F5 189.57 166.5 24567 22251 23385 24450 21269 23363 23299 24393 25678 34154 36231 37316 36550 32107 26579 42102 47790 38500 22722 20385 23825 24509 22317 23743 23469 25110 26479 34071 36682 37568 36846 33806 28455 41899 45456 36640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16369000 24619 2279 23107 46245;46246 37259;37260 37260 2 9606 Homo sapiens -0.0845906109796033 SGYLLPDTK Unmodified 992.51786 0.51786169 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A7P0T917;B4DU71;B4DHT9 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 6.5 1.12 1 1 1 1 50.774 50.85 3 0.0014271 13935 20230619_1887_Aki_TMTPro18x_K_F7 81.972 63.66 254440 196750 204730 225190 267600 276020 273330 299000 333340 299930 310060 327070 349400 297240 300430 379530 364490 358440 234810 180420 213170 225830 273190 275850 277100 303740 335260 303930 321030 329910 353110 311890 310330 378660 348080 340690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1404800000 24620 3452 23108 46247;46248;46249;46250 37261;37262 37262 2 9606 Homo sapiens 0.021303478320419345 SGYLSSER Unmodified 897.41921 0.41921028 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;J7M2B1 EZR;HEL-S-105;EZR-ROS1 Ezrin;Tyrosine-protein kinase receptor yes no 0 0 0 4 0.816 1 1 1 35.007 35.073 2 0.0023581 7587 20230619_1883_Aki_TMTPro18x_K_F4 142.79 50.602 94378 66421 88985 103460 139120 132810 118250 107560 144230 105120 117740 113140 126490 104360 111410 103700 148830 131020 87152 61138 91663 101730 139860 131500 121160 111590 144330 106730 122390 114200 128130 107970 115560 105780 141910 124220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 414380000 24621 3456 23109 46251;46252;46253 37263 37263 1 9606 Homo sapiens -0.033602554129970486 SGYPDIGFPLFPLSK Unmodified 1636.8501 0.85009487 4481 Q9C0C9;K7ES11 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 0 0 0 3.5 0.5 1 1 65.124 65.145 3 1.7278E-09 20596 20230619_1882_Aki_TMTPro18x_K_F3 145.43 115.1 67679 55148 63691 58572 52910 65382 59538 59258 60364 85765 88259 84655 96186 82776 82810 100730 99653 107260 62549 50527 64838 59000 56047 65472 59732 61665 62670 85189 89559 85955 97289 86413 85473 101250 95237 101780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141720000 24622 4481 23110 46254;46255 37264 37264 1 9606 Homo sapiens 0.0571438272593241 SGYSEVNLSK Unmodified 1082.5244 0.52440364 1981 P09884;A6NMQ1 POLA1 DNA polymerase alpha catalytic subunit;DNA polymerase yes no 0 0 0 7 0 1 45.646 45.733 2 0.012711 11613 20230619_1887_Aki_TMTPro18x_K_F7 91.584 51.582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24623 1981 23111 46256 37265 37265 1 9606 Homo sapiens -0.013557590072423409 SGYSSPGSPGTPGSR Unmodified 1392.627 0.62697123 597 P10636-3;A0A024RA19;A0A0G2JMX7;A0A0G2JS76;A0A024R9Y1;A0A0G2JPD5;A0A0G2JQJ7;A0A7I2PLE3;A0A024RA17;A0A7P0T936;A0A024R9Y0;I3L170;B3KTM0;A0A7I2PJZ2;P10636-5;P10636-7;P10636-6;P10636-8;P10636-4;P10636-2;P10636;P10636-9 MAPT Microtubule-associated protein tau;Microtubule-associated protein yes no 0 0 0 6.5 0.5 1 1 33.823 33.884 2 1.9E-05 7232 20230619_1886_Aki_TMTPro18x_K_F6 117.09 104.05 14182 7310.9 10823 16662 4765.5 5039.3 9864.1 6348.6 10679 17540 24422 29530 32804 30022 29472 31725 34447 36459 13058 6779.4 11216 15881 5572.9 6000.1 9684.3 6734.9 11396 17487 24815 29450 33068 31030 30313 32113 32924 34572 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19373000 24624 597 23112 46257;46258 37266 37266 1 9606 Homo sapiens -0.053637180064242784 SHAVACVNQFIISR Unmodified 1600.8144 0.81439484 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;Q92973-3;A0A7P0T944;A0A7P0T9C0 TNPO1 Transportin-1 yes no 0 0 0 4.5 0.5 1 1 47.792 47.851 3 2.6269E-16 13013 20230619_1883_Aki_TMTPro18x_K_F4 197.25 146.04 166860 127780 170620 172370 168490 183990 166700 198300 232230 171120 187630 160870 204490 161200 182360 199670 205150 196080 154260 117370 172960 170580 175220 185460 170310 200760 230910 174200 195140 164000 207070 168380 187180 199780 196000 186300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 556380000 24625 629 23113 46259;46260 37267;37268 37267 2 9606 Homo sapiens 0.0380202199728501 SHAVGPQEIR Unmodified 1092.5676 0.56760585 2626 B4DYZ1;Q9H8H2 DDX31 Probable ATP-dependent RNA helicase DDX31 yes no 0 0 0 4.5 0.5 1 1 29.889 29.96 3 1.1934E-05 5556 20230619_1883_Aki_TMTPro18x_K_F4 127.51 112.48 30248 17342 28296 30662 38419 41935 35204 36620 49036 31269 38108 35131 39268 31837 32360 36336 37817 33649 27902 16006 29073 29991 39044 41402 36097 37625 48676 32049 39632 35405 39709 33187 33349 36286 36101 32004 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44261000 24626 2626 23114 46261;46262 37269;37270 37269 2 9606 Homo sapiens 0.025024755606864346 SHAVLLVK Unmodified 865.53854 0.53853756 375 Q14807;A0A8I5QJF2;A0A8I5KQ45;A0A8I5KRF7;A0A024R632;B7Z9T5;A0A8I5KW08;A0A8I5QL17;A0A8I5KTF7;A0A8I5QKY3;A0A8I5QJC5;A0A8I5KXF9;A0A8I5KSP6;A0A8I5KXF2;H3BRB3;Q14807-2 KIF22 Kinesin-like protein KIF22;Kinesin-like protein yes no 0 0 0 3 0 1 42.127 42.189 3 0.021318 10541 20230619_1882_Aki_TMTPro18x_K_F3 73.248 35.521 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24627 375 23115 46263 37271 37271 1 9606 Homo sapiens 0.10038983002368695 SHCFVTYSTVEEAVATR Unmodified 1955.9047 0.90472599 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3;Q69YJ6;G3V3B0;Q9UKV3-3;Q9UKV3-2 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 0 6 0 1 50.506 50.583 3 4.5346E-48 14162 20230619_1886_Aki_TMTPro18x_K_F6 235.35 218.95 87077 48972 73195 86872 81658 57534 80181 77498 92547 87993 81202 89083 96921 81382 89230 84715 76817 107900 80254 45205 75668 84187 83898 60909 81313 78129 93180 88391 84601 90068 98026 84431 90170 86390 73833 102130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193380000 24628 2896 23116 46264 37272 37272 1 9606 Homo sapiens -0.03499018255615738 SHCIAEVEK Unmodified 1071.5019 0.50189405 2776 CON__P02769 yes yes 0 0 0 4 0 1 36.592 36.638 2 0.0038211 8175 20230619_1883_Aki_TMTPro18x_K_F4 107.57 74.454 + 9935.8 6224.3 16178 7070.9 65613 46692 33004 29474 60106 18006 17145 26098 8256.1 13416 12357 12196 22366 36314 9221.7 5712.7 16576 7589.2 63200 43870 35920 30954 57889 19159 19277 25650 8985.4 14199 13050 13615 21400 34184 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10857000 24629 2776 23117 46265 37273 37273 1 9606 Homo sapiens -0.030996816764854884 SHDPEEAIR Unmodified 1052.4887 0.48868683 3001;4592 G1UI16;Q29RF7;Q29RF7-3;Q9NTI5-2;Q9NTI5;B7Z5S1;Q9NTI5-3 PDS5A;PDS5B Sister chromatid cohesion protein PDS5 homolog A;Sister chromatid cohesion protein PDS5 homolog B no no 0 0 0 1 0 1 29.752 29.752 3 1.3251E-08 5866 20230619_1880_Aki_TMTPro18x_K_F1 174.92 159.38 30287 7770 21157 29137 31441 22212 32046 28052 49585 35824 41288 42317 47106 40292 25779 45647 37043 40222 27815 7333.4 22441 27529 31817 23114 32781 28487 49145 36022 42973 42605 46889 41896 27322 45428 35356 38249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61083000 24630 3001;4592 23118 46266 37274 37274 1 9606 Homo sapiens -0.03545796464254636 SHDPIEAR Unmodified 923.44609 0.44609374 1573 A0A5F9ZHM6;A0A5F9ZI15;A0A5F9ZHN0;A0A5F9ZH03;A0A5F9ZHE2;A0A5F9ZHR2;A0A5F9ZHL9;A0A5F9ZHJ4;A0A5F9ZI08;A0A5F9ZH39;A0A5F9ZI69;A0A5F9ZHJ6;A0A5F9ZHL3;A0A5F9ZGS5;A0A5F9ZHL5;A0A5F9ZH17;A0A5F9ZI18;A0A5F9ZI56;A0A5F9ZGY1;A0A5F9ZHG3;A0A5F9ZHQ5;A0A994J7V8;A0A5F9ZHC9;A0A5F9ZI81;A0A5F9ZH70;A0A5F9ZGZ1;A0A5F9ZHQ3;A0A5F9ZI36;A0A5F9ZHA1;A0A5F9ZH58;A0A5F9ZI73;A0A5F9ZHY6;A0A5F9ZGS7;A0A5F9ZH34;A0A5F9ZH10;A0A5F9ZH35;E9PCH6;A0A5F9ZI16;A0A5F9ZH99;A0A5F9ZH18;A0A5F9ZGX8;B7Z2H4;A0A5F9ZI53;A0A5F9ZH38;Q01484-5;Q01484-2;A0A5F9ZI45;A0A5F9ZI46;A0A5F9ZH30;B7Z636;A0A5F9ZGZ5;A0A5F9ZI65;A0A5F9ZHT8;A0A5F9ZGY3;A0A5F9ZH19;A0A5F9ZHN5;A0A5F9ZI40;A0A5F9ZHT4;I6L894;A0A5F9ZHD2;A0A5F9ZI41;A0A5K1VW73;A0A5F9ZHF7;A0A5F9ZHE4;B7Z678;Q7Z344;H0Y931;A0A5F9ZHV4;E9PHW9;A0A5F9ZGY4;Q01484;H0Y8Y2;A0A5F9ZHS1;D6RHE1;A0A5F9ZGX3;H0Y933;A0A5F9ZI30;A0A5F9ZHR8;H0YAG3 ANK2;DKFZp686M09125 Ankyrin-2 yes no 0 0 0 2 0 1 26.462 26.54 3 0.0099626 4631 20230619_1881_Aki_TMTPro18x_K_F2 69.954 49.624 7801.3 6450.6 5800 8493.8 8990.1 6725 6686.4 7517.1 7910.6 7947.8 10796 13980 8363.3 9298 8663.2 8252.8 14012 10227 7198.8 5922 6116.9 8382.7 9005.8 6961.6 6917.5 7641.9 8102.5 8187.1 10856 13744 8647.3 9676.6 9094.9 8424.9 13328 9706.8 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2299600 24631 1573 23119 46267 37275;37276 37275 2 9606 Homo sapiens -0.018691468018232626 SHEAEAEPSEPR Unmodified 1337.5848 0.58477206 4573 Q9NQG1 MANBAL Protein MANBAL yes yes 0 0 0 1 0 2 23.266 23.266 3 4.5914E-13 3865 20230619_1880_Aki_TMTPro18x_K_F1 165.58 150.04 5743.9 938.88 6045.6 5797.3 8925.3 6748 8443 6637.4 8380.6 6625.7 9951.8 9750.3 8672.8 8267.8 5041 4624.8 8619 9321.5 5287 909 6155.5 5458.3 9001.6 6746.4 8533.9 6794.6 8593.2 6795.4 10073 9699.3 8726.1 8386 5384.7 4972.3 8216.9 8801.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24220000 24632 4573 23120 46268;46269 37277;37278 37277 2 9606 Homo sapiens -0.07051693414814508 SHEAEVLK Unmodified 911.47125 0.47124585 2660 B5BU83;P16949;A2A2D0;Q96CE4;A0A140VJW2;P16949-2 STMN1 Stathmin yes no 0 0 0 4.5 1.71 1 1 1 1 1 1 35.237 35.3 3 2.2568E-05 7650 20230619_1883_Aki_TMTPro18x_K_F4 168.27 147.4 1826800 217940 1156700 1629800 2092500 1157600 1595100 1671400 2288000 1702500 2536900 2386200 2198700 2120200 1464900 1275000 1842900 2259200 1675000 214520 1246000 1520500 2080000 1218300 1658200 1673600 2298600 1740500 2573500 2381300 2221100 2151100 1522400 1351100 1762500 2133900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 10494000000 24633 2660 23121 46270;46271;46272;46273;46274;46275 37279;37280;37281 37280 3 9606 Homo sapiens 0.011969080007588673 SHEDGSERDDWQR Unmodified 1615.6611 0.6611249 3816 Q0MQR4;Q86W56-3;Q86W56-2;Q86W56;B4DHS4;B4DX76;Q86W56-5;Q86W56-4 PARG Poly(ADP-ribose) glycohydrolase yes no 0 0 1 1 0 1 27.501 27.501 4 0.00018643 5015 20230619_1880_Aki_TMTPro18x_K_F1 106.32 85.86 6795.2 2417.3 4337.2 5665.2 7698 5988.8 7417.7 7191.6 9676.8 8775.6 8066.1 8166.7 8224.6 8224.1 4746.1 7447.5 7007.3 8027 6242.3 2248.7 4666.8 5452.3 7712.3 6059.5 7558.3 7304.4 9667.8 8768.2 8353 8314.4 8233.9 8436.8 5027.6 7522.6 6689.7 7614.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12860000 24634 3816 23122 46276 37282 37282 1 9606 Homo sapiens -0.12207921585468284 SHEGETAYIR Unmodified 1161.5415 0.54145068 3140 J3KTL2;Q07955;A8K1L8;J3KSR8;A0A2I7N9Y9;B7Z570 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 3.2 1.72 1 1 1 1 1 30.262 30.315 3 4.4804E-15 5698 20230619_1882_Aki_TMTPro18x_K_F3 241.13 202.82 185250 47517 138950 177680 213720 149760 168630 163170 280840 214430 270710 238510 272910 235910 140150 273660 213890 220600 170210 44844 146230 168070 214530 153850 176020 167230 279110 214910 277810 241170 272210 245290 149670 271060 203980 210070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2923399999.9999995 24635 3140 23123 46277;46278;46279;46280;46281 37283;37284;37285 37284 3 9606 Homo sapiens -0.03285838401438923 SHEGETSYIR Unmodified 1177.5364 0.53636531 3844 Q13242;A8K3M9 SRSF9 Serine/arginine-rich splicing factor 9 yes no 0 0 0 4 1.58 1 1 1 1 29.473 29.542 3 6.9129E-10 5518 20230619_1881_Aki_TMTPro18x_K_F2 198.25 162.71 48086 16233 31045 44030 49939 36858 39162 41564 53517 48818 60415 56953 58176 51908 38105 55948 54091 60395 44170 15153 33286 42020 50016 37923 40556 42343 53970 49205 61499 57298 58513 53916 40085 56357 51643 57293 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 263960000 24636 3844 23124 46282;46283;46284;46285 37286;37287;37288;37289 37286 4 9606 Homo sapiens -0.045301422640704914 SHFEQWGTLTDCVVMR Oxidation (M) 1980.8822 0.88221641 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;F8VZ49;B4E0B5;Q32P51;A0A024QZ98;B4DP35;F8W646 HNRNPA1;HNRPA1;hCG_2020860;HNRNPA1L2;RP11-78J21.1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 1 0 7.5 0.5 1 1 52.252 52.327 3 8.0698E-06 14626 20230619_1887_Aki_TMTPro18x_K_F7 102.1 81.15 457630 122890 380250 482850 452380 358440 453000 463870 544180 474570 538160 552210 524990 519900 418150 615800 459060 587010 420790 116090 394210 455650 463390 373970 459550 467110 548760 481460 551800 556220 531640 541970 430520 615110 439720 557380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4600100000 24637 640 23125 46286;46287 37290;37291 37290 381 2 9606 Homo sapiens -0.06898940924907038 SHFEQWGTLTDCVVMR Unmodified 1964.8873 0.88730179 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;F8VZ49;B4E0B5;Q32P51;A0A024QZ98;B4DP35;F8W646 HNRNPA1;HNRPA1;hCG_2020860;HNRNPA1L2;RP11-78J21.1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 7.5 0.5 1 1 55.405 55.466 3 1.1539E-33 15925 20230619_1887_Aki_TMTPro18x_K_F7 245.48 218.85 352100 162630 328470 373320 255620 294870 344820 344280 446150 477540 386980 381460 495330 411270 399570 457090 396940 503000 324510 150930 334830 358310 273980 304890 345680 351920 446840 472580 404460 392490 497450 425950 408200 461000 380540 476870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2485600000 24638 640 23125 46288;46289 37292;37293 37292 2 9606 Homo sapiens -0.05654637062298207 SHFEQWGTLTDCVVMRDPNTK Unmodified 2520.1526 0.15257761 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;F8VZ49;B4E0B5;Q32P51;A0A024QZ98;B4DP35;F8W646 HNRNPA1;HNRPA1;hCG_2020860;HNRNPA1L2;RP11-78J21.1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 1 5.67 3.3 1 2 63.36 63.39 4 4.5144E-11 15100 20230619_1888_Aki_TMTPro18x_K_F8 125.04 112.11 199810 70977 174000 195490 159140 128100 182380 189870 200580 196310 174020 157320 207230 166730 142040 252180 177010 196190 183910 66245 178730 186130 166790 135970 183170 189920 202350 196830 181070 162030 207330 176200 148140 248560 169150 186870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5525600000 24639 640 23126 46290;46291;46292 37294;37295;37296 37295 3 9606 Homo sapiens -0.04669257450177611 SHFEQWGTLTDCVVMRDPNTK Oxidation (M) 2536.1475 0.14749223 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;F8VZ49;B4E0B5;Q32P51;A0A024QZ98;B4DP35;F8W646 HNRNPA1;HNRPA1;hCG_2020860;HNRNPA1L2;RP11-78J21.1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 1 1 7.67 0.471 1 2 50.968 51.045 3;4 2.1047E-07 13937 20230619_1888_Aki_TMTPro18x_K_F8 108.28 98.993 348890 107410 294590 351870 353600 213510 355320 328470 299990 329720 322730 329860 362020 281370 247200 447190 283030 390450 320930 100800 304770 333030 361180 229060 356470 327930 309970 332900 331740 333500 362590 300650 256540 442880 271200 371060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1933999999.9999998 24640 640 23126 46293;46294;46295 37297;37298 37298 381 2 9606 Homo sapiens -0.05913561312763704 SHFVAASLSNQK Unmodified 1287.6571 0.65714914 4199 Q86XP3;Q86XP3-2;B3KTL4;B3KX23;T2DQ69;B3KV84;B3KMI4 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 0 0 3 0 1 41.29 41.349 3 3.7761E-07 10189 20230619_1882_Aki_TMTPro18x_K_F3 155.99 136.33 41940 24432 36961 46362 49334 52677 49750 51263 57676 31949 42094 45096 42649 34644 48209 40419 43992 42759 38673 22571 38206 45050 50280 52715 50364 51960 57592 33761 43987 44849 43765 36384 48647 40684 42124 40593 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49259000 24641 4199 23127 46296 37299 37299 1 9606 Homo sapiens 0.02482685449422206 SHGIDLDHNR Unmodified 1162.5479 0.54793304 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;Q6NSG3;Q58F29;Q6P169;C9JR83;C9J9E4;C9JVD8;C9J578 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 3 0 1 23.198 23.35 3 4.7496E-10 3873 20230619_1882_Aki_TMTPro18x_K_F3 196.52 153.92 16615 12187 13920 17040 23874 16169 18114 19510 24611 21150 25562 20908 22550 17044 14545 21992 21010 20864 15333 11201 14519 16795 23793 16517 18797 19739 24732 21281 26000 21125 22718 17979 15330 21935 20039 19830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37349000 24642 4593 23128 46297 37300 37300 1 9606 Homo sapiens -0.026839004500743613 SHGLFGLNENQLR Unmodified 1483.7532 0.75317479 4358 Q96H79 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 0 0 0 8 0 1 46.849 46.897 3 4.9893E-11 12212 20230619_1888_Aki_TMTPro18x_K_F8 180.61 161.04 35527 23339 33391 34262 33784 37566 36613 33460 45866 41400 42835 37772 43202 39134 38961 45431 38341 38293 32794 21473 34108 33735 35157 37632 37033 34688 46072 41330 44069 38580 43892 40638 39695 45141 36690 36447 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131090000 24643 4358 23129 46298 37301 37301 1 9606 Homo sapiens 0.030648332895225394 SHHPSGLR Acetyl (Protein N-term) 931.46241 0.4624125 2433 B3KWQ6;P41219;P41219-2 PRPH Peripherin yes no 1 0 0 6.5 0.5 1 1 22.889 22.957 2 0.018802 3622 20230619_1887_Aki_TMTPro18x_K_F7 49.358 41.945 0 0 0 0 772.25 0 835.27 0 0 0 1015.6 0 0 0 0 0 1056.9 0 0 0 0 0 733.47 0 810.26 0 0 0 942.67 0 0 0 0 0 993.68 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 1 0 737650 24644 2433 23130 46299;46300 37302 37302 1 9606 Homo sapiens -0.0060602084504353115 SHILYDR Unmodified 902.46102 0.46101552 2410 B3KT25;Q96S55-2;Q96S55;Q96S55-4;Q96S55-3 WRNIP1 ATPase WRNIP1 yes no 0 0 0 5 0 1 33.637 33.722 3 0.045661 7030 20230619_1885_Aki_TMTPro18x_K_F5 62.2 38.001 29463 17169 30023 37388 44965 44961 32785 43554 54825 41278 82603 115020 44529 60302 84820 37172 72609 81369 27199 15897 30710 36146 45204 44829 34486 44541 55566 44056 82044 111380 48693 62673 84606 40369 69651 76785 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16022000 24645 2410 23131 46301 37303 37303 1 9606 Homo sapiens 0.005883450661826828 SHIMAAK Oxidation (M) 772.39016 0.39015876 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;B4DYC8;H0Y914 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 1 0 5.33 3.09 1 1 1 30.313 30.352 3 0.0069922 5705 20230619_1888_Aki_TMTPro18x_K_F8 94.262 38.821 147680 64320 185290 172920 272630 203050 192170 234160 215190 70664 104890 92821 75687 53499 129900 56791 92323 61941 136440 59906 186190 165970 273250 203740 199220 232570 213100 80977 111570 92042 80691 56689 128640 57555 88487 58889 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 67208000 24646 2633 23132 46302;46303;46304 37304;37305;37306 37306 1588 3 9606 Homo sapiens -0.0051407124298066265 SHIMAAK Unmodified 756.39524 0.39524414 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;B4DYC8;H0Y914 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 1.5 0.5 1 1 34.109 34.138 3 0.005004 7618 20230619_1880_Aki_TMTPro18x_K_F1 102.72 57.001 157640 33645 176700 183790 281730 208910 185560 245320 240780 52132 77638 51011 49314 42224 130450 25012 63271 31997 145240 32260 179370 173320 280980 210050 194430 242760 235110 63245 86069 51751 55101 42947 126920 26162 60970 30431 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119580000 24647 2633 23132 46305;46306 37307 37307 1 9606 Homo sapiens 0.007302326196281683 SHLDSPEAR Unmodified 1010.4781 0.47812215 2616 B4DWT0;K7ER08;K7EP90;Q9BTD8-4;Q9BTD8-2;Q9BTD8-3;Q9BTD8 RBM42 RNA-binding protein 42 yes no 0 0 0 1 0 1 27.364 27.364 3 0.00014508 4969 20230619_1880_Aki_TMTPro18x_K_F1 133.13 108.84 9472.2 1103.4 6208.7 9245.1 14812 10291 9491.4 10017 12320 10099 11676 12561 9641.8 13742 8287.5 5771.5 11482 12452 8686.8 1094.1 6717.4 8657.7 14527 10318 9961 10254 12363 10285 11923 12662 9880.5 13699 8613.1 6314.9 10962 11753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8287800 24648 2616 23133 46307 37308 37308 1 9606 Homo sapiens -0.026697791186620634 SHLEPEEK Unmodified 967.46108 0.4610751 2232 B2R6A9;Q9BW71-2;Q9BW71;Q9BW71-3 HIRIP3 HIRA-interacting protein 3 yes no 0 0 0 2 0.816 1 1 1 33.637 33.678 3 4.7873E-05 7141 20230619_1881_Aki_TMTPro18x_K_F2 157.91 135.27 59657 12398 59045 73020 94791 61671 73192 86341 94239 67308 117800 121200 97546 95741 75310 43311 88986 109050 54902 11931 60595 68489 94743 63765 75738 85998 95587 70684 118840 119630 99198 96829 77550 48175 85148 102810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77522000 24649 2232 23134 46308;46309;46310 37309;37310 37310 2 9606 Homo sapiens -0.023956997244681588 SHLEVPLEENVNR Unmodified 1534.774 0.77396981 465 Q96CT7;A0A024R7M8;M0R2F5 CCDC124;LOC115098 Coiled-coil domain-containing protein 124 yes no 0 0 0 2.5 0.5 1 1 43.069 43.143 3 0.00069423 11004 20230619_1882_Aki_TMTPro18x_K_F3 89.433 85.829 116240 81338 129800 123800 168620 173940 146130 148980 157520 115450 173130 182830 149000 144920 176780 134740 178940 179800 107490 74848 131260 122140 171330 171470 149040 153020 160240 120590 175970 181260 154270 150130 179150 138240 171190 170300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144670000 24650 465 23135 46311;46312 37311;37312 37312 2 9606 Homo sapiens 0.027973788785175202 SHLEVPLEENVNRR Unmodified 1690.8751 0.87508084 465 Q96CT7;A0A024R7M8;M0R2F5 CCDC124;LOC115098 Coiled-coil domain-containing protein 124 yes no 0 0 1 4 0 1 38.863 38.906 4 1.2451E-08 9084 20230619_1883_Aki_TMTPro18x_K_F4 155.98 132.6 72437 37633 54987 66182 73960 60426 68634 65455 72374 70909 95427 72638 74710 65831 73931 82043 78879 85913 66694 34749 57632 64367 75051 61674 69634 66693 74392 71419 95757 73548 76871 68988 75517 82376 75472 81534 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326070000 24651 465 23136 46313 37313 37313 1 9606 Homo sapiens 0.05727830581213311 SHLFFTAGK Unmodified 1006.5236 0.52361577 4064 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 WDR3 WD repeat-containing protein 3 yes no 0 0 0 3.5 0.5 1 1 47.104 47.165 3 0.0036333 12704 20230619_1883_Aki_TMTPro18x_K_F4 79.974 39.622 158980 83481 150060 189890 158030 148450 188920 170660 241360 184860 186840 156370 197030 160390 165740 195210 177020 177080 146610 77402 153530 182260 164230 153660 190200 173310 240570 185340 194470 160320 199250 167200 169870 194520 169260 168390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146660000 24652 4064 23137 46314;46315 37314 37314 1 9606 Homo sapiens 0.020614911343727726 SHLGNVHDQDN Unmodified 1234.5327 0.53267691 4283 Q8WW12;Q8WW12-3 PCNP PEST proteolytic signal-containing nuclear protein yes no 0 0 0 1 0 1 26.172 26.172 3 0.042889 4479 20230619_1880_Aki_TMTPro18x_K_F1 47.288 41.255 1798.3 0 1196.3 1730.9 1279.4 937.96 2370.4 1665.5 2251.6 893.5 2306.4 1884.7 831.43 0 1978.9 1191.9 1738.3 1090.8 1647.9 0 1270.2 1591.5 1348.1 1022.5 2319.9 1634.6 2292.4 974.13 2298 1807.4 944.95 0 1974.4 1174.9 1661 1039.5 1 0 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 38533000 24653 4283 23138 46316 37315 37315 1 9606 Homo sapiens -0.07520812037887481 SHLIQVER Unmodified 980.54033 0.54032847 1944 A4D218;Q9Y6D9;C9JJ38 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes no 0 0 0 5.5 0.5 1 1 34.151 34.197 3 3.1239E-05 7324 20230619_1886_Aki_TMTPro18x_K_F6 178.94 60.448 34564 18296 30510 35607 38481 33572 37566 37372 49641 40966 50076 51751 48825 41483 39239 46349 48757 46972 31859 16918 31470 34481 39274 34186 38297 38024 49869 41548 51296 51696 49420 43377 40634 46518 46546 44614 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45876000 24654 1944 23139 46317;46318 37316;37317 37317 2 9606 Homo sapiens 0.04927992020327565 SHLLNCCPHDVLSGTR Unmodified 1864.8672 0.86723505 4715 Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 0 0 0 4.5 3.5 1 1 39.822 39.816 4 1.9265E-25 10004 20230619_1880_Aki_TMTPro18x_K_F1 176.17 157.8 110380 61923 99744 115290 122700 110010 117740 129790 130210 121060 133510 139540 139510 107750 112140 141470 151350 143540 101790 57201 102610 111900 125330 112070 119430 130980 132080 123330 137100 139770 140860 114020 116840 141640 144380 136340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 297780000 24655 4715 23140 46319;46320 37318;37319 37318 2 9606 Homo sapiens -0.030603880022226804 SHLVGVKPFEADR Unmodified 1453.7678 0.76776223 1533 A0A3F2YNX0;A0A3F2YNZ0;F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5;A4QN18;A0A8I5KPG1;A4QN19 SEC16A Protein transport protein Sec16A yes no 0 0 1 8 0 1 42.225 42.227 4 0.016382 10404 20230619_1888_Aki_TMTPro18x_K_F8 68.972 41.874 38486 16666 29737 38404 40923 28474 41003 41141 39242 49106 67878 65770 61095 57859 58574 36492 66203 54993 35415 15475 31137 36832 41499 29846 41299 41385 41224 49670 67985 65698 62471 58803 59896 38141 63192 52078 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33752000 24656 1533 23141 46321 37320 37320 1 9606 Homo sapiens 0.0590290543766514 SHMMDVQGSTQDSAIK 2 Oxidation (M) 1765.7611 0.76109822 909 A0A090N8Y2;P13667 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 2 0 3.5 0.5 1 1 34.381 34.437 3 3.7743E-08 7285 20230619_1883_Aki_TMTPro18x_K_F4 122.81 106.31 75849 15392 57548 74324 106320 63149 93240 90362 114820 87542 119150 116040 106520 89573 80804 127650 89418 119430 69666 14696 60760 69953 105870 65347 95379 90385 115800 89500 121420 115720 107880 95245 83377 127060 85679 113410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 203210000 24657 909 23142 46322;46323 37321;37322 37322 517;518 2 9606 Homo sapiens -0.09115188358146042 SHMMDVQGSTQDSAIK Unmodified 1733.7713 0.77126898 909 A0A090N8Y2;P13667 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 4.5 0.5 1 1 42.238 42.301 3 2.1906E-14 10494 20230619_1885_Aki_TMTPro18x_K_F5 171.46 160.96 106890 30022 87912 97863 112220 100130 111910 126130 145520 164380 162740 179890 178610 149520 113040 182630 138770 187970 98286 28196 91282 93174 114540 101600 113920 128010 147160 164470 166860 180810 178650 157000 117930 183080 132860 178300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 287470000 24658 909 23142 46324;46325 37323;37324 37324 2 9606 Homo sapiens -0.0662658063292838 SHMMDVQGSTQDSAIK Oxidation (M) 1749.7662 0.7661836 909 A0A090N8Y2;P13667 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 1 0 5 0 2 39.019 39.11 3 0.0038599 9210 20230619_1885_Aki_TMTPro18x_K_F5 68.481 56.12 15127 5880.9 14497 13023 13274 15853 16698 16070 21815 16872 19790 20653 24837 20310 16064 19699 20033 20528 13937 5461.1 14755 12595 13995 15803 16793 16424 21835 17137 20614 20783 24767 20931 16728 19846 19133 19487 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17203000 24659 909 23142 46326;46327 37325;37326 37325 517;518 2 9606 Homo sapiens -0.07870884495559949 SHPAMSPGTPGPTMGR Oxidation (M) 1595.7184 0.71844555 1792 Q8NFD5-1;A0A8Q3S458;Q8NFD5-3;Q8NFD5-2;Q8NFD5;A0A1B0GTJ8;A0A6Q8NVI4;A0A3F2YNW7;A0A6I8PTU7;A0A1B0GUC6;A0A1B0GUG2;A0A1B0GU09 ARID1B AT-rich interactive domain-containing protein 1B yes no 0 1 0 8 0 1 31.438 31.448 3 0.00043457 6137 20230619_1888_Aki_TMTPro18x_K_F8 75.911 64.64 1894 1472.3 2982.7 1402.6 4183.5 2453.4 2529.8 2064.1 2367.9 2677.6 2915.7 4166.2 3946.9 3493.8 2165 3864 3178.5 2666.9 1759.1 1348 2944.5 1440.1 4185.2 2399.4 2643.1 2152.6 2448.7 2718.2 3017.4 4135.5 3912.1 3641.1 2297.9 3806.2 3027.8 2547.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8977900 24660 1792 23143 46328 37327 37327 1158 1 9606 Homo sapiens -0.05558493905141404 SHPDLLQLPR Unmodified 1174.6459 0.64585618 1616 Q27J81;Q27J81-2;A0A6Q8PHA2;A0A6Q8PH71;A0A6Q8PHG2;A0A6Q8PGN3;A0A6Q8PF44;A0A6Q8PH25;A0A6Q8PF29;A0A087X118;A0A6Q8PFW4;A0A6Q8PGC7;A0A0A0MQU1;A0A6Q8PHS8;A0A6Q8PH63 INF2 Inverted formin-2 yes no 0 0 0 8 0 1 45.001 45.029 3 3.1971E-32 11493 20230619_1888_Aki_TMTPro18x_K_F8 200.71 149.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24661 1616 23144 46329 37328 37328 1 9606 Homo sapiens 0.06551908145934249 SHPELQTPK Unmodified 1035.5349 0.53490874 1571 A0A5F9UY30;O43493-4;O43493;O43493-5;O43493-3;O43493-7 TGOLN2 Trans-Golgi network integral membrane protein 2 yes no 0 0 0 6 0 1 35.516 35.569 3 0.00034543 7835 20230619_1886_Aki_TMTPro18x_K_F6 112.3 78.429 44513 26777 41008 43573 53306 53225 63563 61451 82315 61185 63032 60237 64374 53122 49720 73808 70862 59056 41065 24680 42159 42739 54657 53261 64021 62183 81956 61857 65594 60998 64985 56109 52114 72943 67514 56291 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26359000 24662 1571 23145 46330 37329 37329 1 9606 Homo sapiens 0.018562684378366612 SHPLDLSPNVQSR Unmodified 1448.7372 0.73719038 935 A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBF7;H0YBM4 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 7 0 1 38.787 38.85 3 9.6116E-16 8790 20230619_1887_Aki_TMTPro18x_K_F7 206.18 193.65 80353 57852 74154 76988 77192 81633 78357 82904 90989 88701 103410 105890 104390 95520 97428 113900 115010 111320 74197 53147 75896 76238 79972 82225 79371 84760 92465 89857 105570 106400 106230 99795 100250 113970 109850 105770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112490000 24663 935 23146 46331 37330 37330 1 9606 Homo sapiens 0.030771270525974614 SHPLDPIDTVDFER Unmodified 1639.7842 0.78420015 2024;1277 A0A1B0GVU9;Q96AW5;A0A0U1RQL2;Q53HS0;A8K3A8;P47897-2;P47897;C9J165;A0A0U1RQT0;B4DTH6;A0A0U1RQM8;A0A0U1RQU2;A0A0U1RQE9;B7Z840;A0A0U1RRI9 QARS Glutamine--tRNA ligase no no 0 0 0 2.33 0.471 2 1 50.934 50.992 3 0.00046219 14880 20230619_1881_Aki_TMTPro18x_K_F2 100.11 78.445 101390 90475 127110 124780 98146 107700 115420 110410 144960 95703 122840 77447 119920 99990 116130 143150 144890 116030 94004 83081 126520 122970 104660 110260 116330 112280 144890 97093 126640 80552 122350 104670 119880 141560 138150 110600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 402460000 24664 1277;2024 23147 46332;46333;46334 37331;37332 37331 2 9606 Homo sapiens -0.01010058186943752 SHPLPETAVR Unmodified 1105.588 0.58800695 4090 Q68CN2;Q71SV8;Q9HCS7 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 yes no 0 0 0 5 0.816 1 1 1 31.9 31.97 3 2.0267E-05 6389 20230619_1885_Aki_TMTPro18x_K_F5 144.47 93.506 41185 27925 48654 51345 67237 57126 51485 67984 62993 48781 67516 64139 60106 52412 61329 49116 65163 62915 38099 25767 49072 49980 67807 57574 53234 68139 63647 50789 68714 64040 61641 54281 62483 50229 62295 59619 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181600000 24665 4090 23148 46335;46336;46337 37333;37334 37333 2 9606 Homo sapiens 0.03943646220500341 SHQGLDRQELSFAAR Unmodified 1713.8547 0.85467975 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 1 7 0 1 37.839 37.903 4 2.0391E-07 8438 20230619_1887_Aki_TMTPro18x_K_F7 132.81 115.11 26916 16394 26669 19676 28273 21414 26515 25325 28553 26106 27462 25594 27269 20422 25754 29683 36590 23501 24847 15056 27078 19650 29115 21641 26908 25620 28930 26322 28209 25848 27761 21729 26829 29324 34814 22435 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41860000 24666 3606 23149 46338 37335 37335 1 9606 Homo sapiens 0.026306599214422022 SHQKPPQGMEIK Oxidation (M) 1394.6976 0.69763375 1553 O95394-4;J3KN95;H0Y987;A0A8V8TMH7;B3KN28;A0A8V8TLT8;A0A494C1Q4;A0A8V8TNH4;A0A494C1E2;A0A8V8TMI1;O95394;O95394-3;A0A087WT27;A0A494C0G1 PGM3 Phosphoacetylglucosamine mutase yes no 0 1 1 7.5 0.5 1 1 32.671 32.715 4 0.019249 6542 20230619_1888_Aki_TMTPro18x_K_F8 71.558 42.654 14909 5693.3 10911 10365 17795 17691 14547 16807 18621 16525 19975 21525 20439 16463 17279 14310 16503 17698 13709 5270.8 11514 10174 17855 17307 14984 17208 18789 16868 20457 21437 20683 17040 17567 14619 15806 16769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25604000 24667 1553 23150 46339;46340 37336 37336 1017 1 9606 Homo sapiens 0.016072837775482185 SHQPPPPPHEK Unmodified 1249.6204 0.62036971 1789 A0A8J8YYJ1;Q01105-3 SET Protein SET yes no 0 0 0 5 0 1 28.341 28.414 4 0.004716 5115 20230619_1885_Aki_TMTPro18x_K_F5 72.496 58.56 14341 8468.7 14549 13708 30553 24374 22399 22500 27564 18307 23341 23824 28591 28475 22969 14191 22296 24642 13240 7805.4 14988 13547 30182 23807 23202 22990 27603 18924 24376 24078 28769 28459 23368 15113 21355 23286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7145800 24668 1789 23151 46341 37337 37337 1 9606 Homo sapiens 0.005544336235061564 SHRPFVNFGRPEGGK Unmodified 1683.8594 0.8593712 4210 Q8IXT5;B9ZVT1 RBM12B RNA-binding protein 12B yes no 0 0 2 5 0 1 36.147 36.239 5 2.0843E-06 7980 20230619_1885_Aki_TMTPro18x_K_F5 120.63 83.033 41387 15583 38794 44933 40738 41738 41583 43958 55912 48544 49425 49591 54197 51185 41390 52175 45923 56509 38120 14552 39683 42862 42189 42451 42328 44881 55881 48871 51206 50351 54589 52785 42628 52631 43968 53588 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39884000 24669 4210 23152 46342 37338 37338 1 9606 Homo sapiens 0.04479588854792382 SHSECGIIEK Unmodified 1158.5339 0.53392246 4216 Q8TDR3;Q8IYV2;Q9UHI6;A0A7P0T9T8;Q8NEH0 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 0 0 0 3.5 0.5 1 1 36.96 37.009 3 0.00041718 8338 20230619_1883_Aki_TMTPro18x_K_F4 106.62 84.085 27558 14061 27790 27223 30434 29994 32366 34229 43949 34811 38599 41380 38628 31951 32989 38497 42524 38137 25424 13004 28244 26436 31443 30202 32879 34683 43872 35358 39865 41384 39161 33613 34199 38547 40564 36242 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48045000 24670 4216 23153 46343;46344 37339 37339 1 9606 Homo sapiens -0.03900313993358395 SHSIFLINVK Unmodified 1156.6604 0.66044361 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;Q6P164;Q66K46;Q2TA90 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 4.5 0.5 1 1 52.755 52.803 3 1.359E-05 15277 20230619_1883_Aki_TMTPro18x_K_F4 145.9 122.05 115070 55420 91791 107660 100920 99693 110730 105080 137880 55229 56516 49540 55817 47656 78107 63313 61273 58502 105950 51273 95399 104230 104370 101470 111830 105710 135410 58471 61794 50585 58080 50049 78020 63152 58770 55627 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313730000 24671 2727 23154 46345;46346 37340 37340 1 9606 Homo sapiens 0.08837980294083536 SHTDQLVLIFAGK Unmodified 1427.7773 0.77726428 187 A0A024R258;B3KNI8;B3KNI2;Q9UMX0-2;Q9UMX0;Q9UMX0-4 UBQLN1 Ubiquilin-1 yes no 0 0 0 1.5 0.5 1 1 58.953 58.959 3 9.9258E-05 18175 20230619_1881_Aki_TMTPro18x_K_F2 101.53 79.774 109100 43639 95090 103900 72930 73618 91808 79595 120450 113100 95015 102960 127350 108030 111520 136610 97364 130360 100460 40568 97460 99479 78042 76809 92350 81890 120120 112250 100160 105150 128180 112790 113050 136400 93523 123760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125720000 24672 187 23155 46347;46348 37341 37341 1 9606 Homo sapiens 0.08048673723169486 SHTEEDCTEELFDFLHAR Unmodified 2234.9539 0.95386103 3403 Q567R0;P07919 UQCRH Cytochrome b-c1 complex subunit 6, mitochondrial yes no 0 0 0 2 0.816 1 1 1 58.114 58.129 4 3.3411E-48 17655 20230619_1882_Aki_TMTPro18x_K_F3 271.19 264.42 74226 41304 58447 82533 75151 63707 73435 72811 103760 78351 89790 88620 97429 88261 69542 102720 70605 109840 68377 38198 61055 79619 76634 66048 75051 73952 103350 79264 93061 89543 97898 91804 71468 103290 67816 104100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 973140000 24673 3403 23156 46349;46350;46351 37342;37343;37344 37344 3 9606 Homo sapiens -0.11421774757309322 SHTFPELAYR Unmodified 1219.5986 0.59857163 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 7.5 0.5 1 1 42.946 42.991 3 1.0664E-19 10673 20230619_1888_Aki_TMTPro18x_K_F8 223.36 190.75 106010 40018 96952 118200 102730 89486 111930 108340 134340 113420 112340 102570 116850 98826 104810 129970 118310 120830 97627 37390 99426 112400 106360 93018 113000 109580 134670 114060 116430 104580 118560 103720 107680 129520 113080 114860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 586030000 24674 4414 23157 46352;46353 37345;37346 37346 2 9606 Homo sapiens -0.0024437112508621794 SHTGDAPFQCWLCSAK Unmodified 1863.8032 0.80323781 2391 B3KQX0;Q9NTW7-6;Q9NTW7-4;Q9NTW7-5 yes no 0 0 0 2 0 1 55.036 55.057 3 0.00059517 16626 20230619_1881_Aki_TMTPro18x_K_F2 74.772 62.217 14075 10309 14030 13912 14181 13609 15175 16791 18814 18898 21417 21983 21720 22392 16573 21105 16773 20450 13006 9471.7 14255 13754 14733 13861 15365 16985 19064 19080 21861 22189 21934 22994 16981 21185 16072 19417 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16832000 24675 2391 23158 46354 37347 37347 1 9606 Homo sapiens -0.09411168159135741 SHTILLVQPTK Acetyl (Protein N-term) 1277.7343 0.73433683 392 P84090;A0A024R6D4;G3V279 ERH Enhancer of rudimentary homolog yes no 1 0 0 5.33 3.09 1 1 1 50.454 50.507 2 1.6933999999999998E-40 13680 20230619_1888_Aki_TMTPro18x_K_F8 180.44 159.92 377680 289160 331960 356490 352020 390060 408890 380660 415610 421760 425030 405200 445250 392240 409780 467510 462800 495170 348740 265360 341500 354950 365630 391680 409150 390690 423510 423560 436430 411820 452230 409050 420570 469960 442510 469900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2740800000 24676 392 23159 46355;46356;46357 37348;37349;37350 37350 3 9606 Homo sapiens 0.10657903665764934 SHVCEHCNAAFR Unmodified 1486.6194 0.6194002 2286 Q8IWK7;Q15552;Q4FD37;Q8TDH4;B2RAI2;Q9UQR1 ZNF148;tb protein Zinc finger protein 148 yes no 0 0 0 5.5 0.5 1 1 26.904 26.956 4 5.4212E-07 4675 20230619_1885_Aki_TMTPro18x_K_F5 156.51 137.3 15173 10882 16543 17615 26280 13745 17332 19934 18478 13702 22621 23770 18247 15778 18230 16340 23105 19779 14030 10021 16821 17184 26161 14367 18044 19774 18905 14478 22831 23406 18765 16562 18795 16612 22037 18762 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13344000 24677 2286 23160 46358;46359 37351;37352 37351 2 9606 Homo sapiens -0.10444472079370826 SHVDLFPK Unmodified 941.49707 0.49706667 4150 Q7L0Y3;C9JVB6 TRMT10C Mitochondrial ribonuclease P protein 1 yes no 0 0 0 7.5 0.5 1 1 45.558 45.621 3 0.0054345 11746 20230619_1888_Aki_TMTPro18x_K_F8 89.698 69.143 208830 95869 175790 268940 215060 221580 218640 237030 277450 214220 214950 210080 227720 197820 175090 243600 210290 221900 192320 89341 182450 256270 220420 227710 222030 240560 276690 217710 223930 213160 229590 206840 181300 242650 200940 210950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 263310000 24678 4150 23161 46360;46361 37353;37354 37354 2 9606 Homo sapiens 0.023978022430469537 SHYEEGPGK Unmodified 1002.4407 0.44067401 2842 D6R9Z7;Q71U45;P15954 COX7C Cytochrome c oxidase subunit 7C, mitochondrial yes no 0 0 0 2.5 0.5 1 1 31.611 31.681 3 1.5659E-05 6369 20230619_1881_Aki_TMTPro18x_K_F2 162.88 110.62 70464 17925 109910 110250 199540 136810 158330 210120 175470 78959 163440 176650 124760 161200 105070 50777 125640 149120 65177 17240 109640 104000 198280 137950 162620 205910 176860 89837 166610 174290 127980 160770 108020 58546 120180 140500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 186240000 24679 2842 23162 46362;46363 37355;37356 37355 2 9606 Homo sapiens -0.06044870384278056 SHYVLYGLVAAMQPR Unmodified 1703.8817 0.88174613 3840 Q59EG8;Q13200;B4DM22;Q13200-3;Q13200-2;Q13041 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 7.5 0.5 1 1 60.508 60.546 3 4.8502E-08 18046 20230619_1888_Aki_TMTPro18x_K_F8 112.15 100.71 20577 16422 20143 20669 18608 19402 20166 19444 22412 21271 14706 19577 22540 19002 22989 15319 16444 19025 19021 15072 20475 20511 19485 19722 20314 19916 22422 21352 15839 19893 22770 19436 22965 15691 15815 18021 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119700000 24680 3840 23163 46364;46365 37357 37357 1 9606 Homo sapiens 0.057960522082339594 SIAFPSIGSGR Unmodified 1090.5771 0.57710791 3298 O75367;O75367-3;O75367-1;B4DJC3;Q59FH0 H2AFY Core histone macro-H2A.1;Histone H2A yes no 0 0 0 3.5 0.5 1 1 52.78 52.821 2 1.3147E-06 15223 20230619_1883_Aki_TMTPro18x_K_F4 167.06 113.09 458450 417230 418230 456650 418230 519110 463350 475010 546250 471830 461010 431670 521760 401210 462100 522300 479130 499300 423910 382220 428500 458860 436280 519160 467180 488180 548330 475990 479470 439280 527490 421500 472220 521450 458400 474410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 998970000 24681 3298 23164 46366;46367 37358;37359 37359 2 9606 Homo sapiens 0.03544243846226891 SIAPSIFGGTDMK Oxidation (M) 1338.649 0.64895222 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 1 0 4.5 3.5 1 1 55.965 55.996 3 2.8856E-06 16133 20230619_1888_Aki_TMTPro18x_K_F8 131.06 105.72 129960 95973 102550 122140 117180 158080 128700 130610 187220 138710 136210 137960 154160 129050 122510 169150 143200 156060 119890 88117 106830 121610 121280 156400 130840 135520 185260 139880 142900 139850 155290 135530 126540 168460 136900 148320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252050000 24682 2188 23165 46368;46369 37360;37361 37361 1368 2 9606 Homo sapiens -0.006826295822065731 SIAPSIFGGTDMK Unmodified 1322.654 0.6540376 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 4.5 3.5 1 1 59.326 59.347 3 6.0206E-05 18195 20230619_1880_Aki_TMTPro18x_K_F1 109.84 88.214 86152 70344 80898 84859 73259 92654 84492 78585 115420 97624 93631 83259 101100 83060 95849 101830 87634 97183 79621 64525 82536 84607 77162 92761 85482 81784 114930 97284 97347 85208 102670 86705 97143 101750 83993 92319 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 95982000 24683 2188 23165 46370;46371 37362;37363 37362 2 9606 Homo sapiens 0.005616742804022579 SIAQLIEK Unmodified 900.52803 0.52803245 4268 Q8TCG1;Q8TCG1-2 KIAA1524 Protein CIP2A yes no 0 0 0 8 0 1 57.017 57.068 2 0.010131 16606 20230619_1888_Aki_TMTPro18x_K_F8 99.688 48.621 123270 97567 111210 124040 102520 132710 131030 124740 151350 149600 135140 125870 162980 125720 131320 166670 139280 144490 113870 89554 113950 123180 108140 133310 131080 128660 152450 149180 140550 128920 163860 131910 134730 165490 133220 137460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86311000 24684 4268 23166 46372 37364;37365 37365 2 9606 Homo sapiens 0.07378955557294375 SIAQYWLGCPVPGQA Unmodified 1645.7923 0.79226242 2802 CON__Q3ZBS7 yes yes 0 0 0 3 0.707 1 2 1 64.709 64.73 2;3 8.9092E-11 20685 20230619_1881_Aki_TMTPro18x_K_F2 121.18 110.55 + 19986 17060 20888 22669 17737 24908 21392 24632 29403 41008 50047 68847 43519 42690 58638 43258 48344 63884 18492 15661 21113 22459 18825 24996 21633 25624 30343 41370 50246 67639 45356 44908 58713 44666 46463 60402 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1704599999.9999998 24685 2802 23167 46373;46374;46375;46376 37366;37367 37366 2 9606 Homo sapiens -0.0048020247115800885 SIASSVR Unmodified 718.39735 0.39735263 2595 B4DUT2;A0A024R7C4;A0A494C108;Q8N9T8;B7ZLF4;B4DUY9 FLJ12949;KRI1 Protein KRI1 homolog yes no 0 0 0 6.5 0.5 1 1 33.464 33.526 2 0.072702 6722 20230619_1887_Aki_TMTPro18x_K_F7 75.972 28.927 46575 29923 55940 60029 81721 83546 64265 69276 89449 25867 30336 30148 28473 23222 47344 18131 40849 24188 43081 27655 56449 58386 82343 82316 66551 70583 87153 28727 33863 30193 30037 23925 47279 18741 39032 22971 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20326000 24686 2595 23168 46377;46378 37368 37368 1 9606 Homo sapiens 0.02688984629105562 SIAYLQMNNLK Oxidation (M) 1309.67 0.67002202 1569 A0A5C2GUK2;A0A7S5C1A5 yes no 0 1 0 4 0 1 48.911 48.949 4 0.064625 13507 20230619_1883_Aki_TMTPro18x_K_F4 50.284 27.399 45478 42838 49780 45895 45912 58425 53269 55539 64588 50777 45938 42792 50440 40284 40785 50803 55788 48881 42125 39232 50141 46293 48255 58054 53638 56786 64389 51359 48177 43739 50887 42214 42522 50746 53185 46473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91193000 24687 1569 23169 46379 37369 37369 1028 1 9606 Homo sapiens 0.027573805173005894 SICEVLDLER Unmodified 1232.6071 0.60708741 3032 H0Y993;P35659;B4DFG0;A0A494C028;P35659-2;B4DNW3;H0Y8X0;D6RDA2 DEK Protein DEK yes no 0 0 0 3.5 0.5 1 1 58.986 59.001 2 4.6545E-05 17976 20230619_1882_Aki_TMTPro18x_K_F3 170.5 127.68 510720 430380 461670 443790 366790 421120 466230 448070 452980 540370 485710 434290 566630 452070 419550 615250 553170 552480 471960 394170 471520 447170 391290 428400 464140 458390 464090 537790 499890 446670 568650 474550 437670 611510 527970 525410 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1742699999.9999998 24688 3032 23170 46380;46381 37370;37371;37372 37370 3 9606 Homo sapiens 8.814729244477348E-05 SICTTVLELLDK Unmodified 1390.7378 0.73776723 3511 P27348;B4DMT8;E9PG15 YWHAQ 14-3-3 protein theta yes no 0 0 0 6 2.92 1 1 2 65.129 65.145 2;3 1.4275E-05 20147 20230619_1887_Aki_TMTPro18x_K_F7 130.56 98.5 79180 57756 65127 68936 55872 58314 62336 67881 64841 88601 81622 83156 97165 90062 56629 109750 103340 116800 73058 52997 67195 68588 58947 60021 62619 69234 66717 88226 83591 84929 96840 93708 61174 110200 98520 110820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1047799999.9999999 24689 3511 23171 46382;46383;46384;46385 37373;37374;37375 37374 3 9606 Homo sapiens 0.05802785657419918 SIDDLEEK Unmodified 947.44476 0.44475633 3083;2862 P09493-3;D9YZV5;Q15657;P09493-8;P09493-9;Q6ZN40;O15513;H7BYY1;P09493-2;B7Z722;A0A024R5W6;P09493-7 TPM1 Tropomyosin alpha-1 chain no no 0 0 0 2 0.816 1 1 1 48.199 48.249 2 0.00048086 13602 20230619_1880_Aki_TMTPro18x_K_F1 163.04 76.564 106160 88981 98558 117690 250170 305940 254960 246460 382720 189340 180630 199040 231780 182330 178640 234360 219250 202000 98122 81690 103310 118840 248440 293510 260240 254120 374060 195200 197130 201140 232450 191390 185120 232710 209270 192260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 691200000 24690 2862;3083 23172 46386;46387;46388 37376;37377 37376 2 9606 Homo sapiens -0.031068256812318396 SIDFPLTK Unmodified 919.50148 0.50148335 3318 O75844;B3KNM6;A0A6Q8PHG9 ZMPSTE24 CAAX prenyl protease 1 homolog yes no 0 0 0 8 0 1 56.876 56.933 2 0.0015506 16519 20230619_1888_Aki_TMTPro18x_K_F8 158.56 67.521 147210 123720 124830 128860 129040 161480 161840 154110 178120 182170 180870 176910 212170 166250 189940 207750 190820 199870 135980 113320 128800 130210 134790 160650 161750 158670 180710 182460 186800 179530 214380 174110 193680 207610 182630 189880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227420000 24691 3318 23173 46389 37378 37378 1 9606 Homo sapiens 0.03851266665958519 SIDGPIRLPIVDK Unmodified 1421.8242 0.82421447 2572 B4DQM6;Q8IYD1 GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 1 2 0 1 57.119 57.136 3 0.027221 17444 20230619_1881_Aki_TMTPro18x_K_F2 58.577 20.221 73848 58739 60177 82122 79680 85036 89058 89685 94372 80607 77144 73065 71999 66421 79753 79871 80021 75461 68169 53969 62703 81005 81472 85856 89377 91057 95128 81733 79740 74315 74060 69425 80976 79808 76530 71737 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52359000 24692 2572 23174 46390 37379 37379 1 9606 Homo sapiens 0.13017533274319248 SIDGTADDEDEGVPTDQAIR Unmodified 2102.924 0.92400069 4592 Q9NTI5-2;Q9NTI5;B7Z5S1 PDS5B Sister chromatid cohesion protein PDS5 homolog B yes no 0 0 0 1 0 1 47.377 47.377 3 5.7814000000000004E-30 13278 20230619_1880_Aki_TMTPro18x_K_F1 209.23 200.84 23026 20417 21238 25771 27900 29929 25899 26702 30603 34451 34395 31373 34820 26204 26971 36193 36216 37704 21289 18731 21850 25631 28402 29878 26378 27702 31089 34303 35097 31825 35134 27753 28126 36263 34572 35790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91488000 24693 4592 23175 46391 37380 37380 1 9606 Homo sapiens -0.08334435221695458 SIDISATIPK Unmodified 1043.5863 0.58627561 2052 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;C9JZP1 NCAPH Condensin complex subunit 2 yes no 0 0 0 8 0 1 54.767 54.833 2 7.1258E-07 15634 20230619_1888_Aki_TMTPro18x_K_F8 144.5 88.487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24694 2052 23176 46392 37381 37381 1 9606 Homo sapiens 0.06622592411895312 SIDLPIQSSLCR Unmodified 1387.7129 0.71294946 1249 Q53ZP9;A0A140VKE7;B4DZR0;O95757;E9PDE8;B4DXT2 HSPA4L Heat shock 70 kDa protein 4L yes no 0 0 0 1 0 1 55.769 55.769 2 0.00057902 16748 20230619_1880_Aki_TMTPro18x_K_F1 122.69 68.533 48848 47603 47981 53598 25139 32494 34889 31668 32415 51430 38614 34715 50161 38538 36078 55522 42149 43776 45216 43610 48495 53372 28211 34462 34586 32986 33518 50383 39797 36147 50131 40545 37378 54804 40280 41697 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96425000 24695 1249 23177 46393 37382 37382 1 9606 Homo sapiens 0.03460150574733234 SIDMSWDSVTMK Oxidation (M) 1414.6109 0.61085216 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8;A0A0J9YVR6;A0A0J9YWM1;E9PN18;E9PMU7;H0YCP8;A0A0J9YXC6 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 1 0 7 0 1 58.688 58.738 3 0.00012294 17292 20230619_1887_Aki_TMTPro18x_K_F7 103.21 88.956 61584 50352 59421 63090 59306 69042 66946 60742 71723 70067 71670 74456 81903 68020 70110 80249 70113 79083 56928 46204 60568 62739 61844 69167 67203 62905 72812 70462 74002 75171 82686 71028 71560 80356 67145 75093 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63394000 24696 1044 23178 46394 37383 37383 609 1 9606 Homo sapiens -0.0798688355921513 SIDMSWDSVTMK Unmodified 1398.6159 0.61593753 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8;A0A0J9YVR6;A0A0J9YWM1;E9PN18;E9PMU7;H0YCP8;A0A0J9YXC6 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 0 0 7 0 1 61.51 61.549 3 0.04233 18483 20230619_1887_Aki_TMTPro18x_K_F7 46.88 34.319 38958 33095 40957 41061 39763 51975 50053 38236 49295 42247 38537 38641 39402 33746 47651 34718 43776 45077 36047 30362 41440 40947 41715 51394 49814 40153 49822 42403 40115 39201 40582 35047 48022 35494 41931 42700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110940000 24697 1044 23178 46395 37384 37384 1 9606 Homo sapiens -0.06742579696606299 SIDNGIFVQLVQANSPASLVGLR Unmodified 2397.3016 0.30160833 481 A0A024R7Z5;O00560-3;O00560;O00560-2;B4DQ93;G5EA09 SDCBP Syntenin-1 yes no 0 0 0 5 0 1 65.544 65.588 3 1.2363E-74 20394 20230619_1885_Aki_TMTPro18x_K_F5 294.09 273.35 21623 13506 20660 22171 21027 23885 23517 20462 23651 24411 23494 23342 25905 21429 25441 24244 24933 22084 19957 12447 21084 21685 21881 23932 23569 21258 24094 24430 24224 23676 26334 22318 25842 24206 23841 21009 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85023000 24698 481 23179 46396 37385;37386 37386 2 9606 Homo sapiens 0.15884959506684027 SIDTFFGMAAQR Unmodified 1342.634 0.63397086 1350 A0A2R8Y4Y9 yes yes 0 0 0 5 0 1 47.926 48.002 2 0.0018898 12897 20230619_1885_Aki_TMTPro18x_K_F5 93.467 52.019 13049 14981 12537 12698 13612 14370 14541 14494 19168 16958 22315 22640 19054 18263 18808 18604 21897 24685 12092 13687 12795 13050 14082 14423 14752 14866 19372 17182 22605 22574 19553 18997 19300 19032 20941 23371 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142560000 24699 1350 23180 46397 37387 37387 1 9606 Homo sapiens -0.023640766595462992 SIDTGMGLER Oxidation (M) 1093.5074 0.50737336 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 1 0 2.5 0.5 1 1 39.132 39.192 2 0.0044777 9282 20230619_1882_Aki_TMTPro18x_K_F3 88.267 76.907 174900 151370 181010 189960 232680 200490 198890 216210 221320 227950 264720 303180 249870 208220 258430 246920 272350 303940 161830 138880 184120 188840 236230 202450 203300 220090 226000 231900 269220 300980 255850 220010 263350 250740 260670 287960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142740000 24700 1637 23181 46398;46399 37388 37388 1068 1 9606 Homo sapiens -0.035640028846728455 SIDTGMGLER Unmodified 1077.5125 0.51245874 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28;A0A6Q8PG62 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 3.5 0.5 1 1 45.427 45.486 2 3.0848E-05 12060 20230619_1882_Aki_TMTPro18x_K_F3 154.85 107.77 375970 332100 353260 381140 356250 417480 400240 391610 483720 487150 502750 576630 524730 488020 496430 541090 578150 627140 347650 304400 361000 381420 371330 418840 403620 404490 488920 489950 516420 578000 533860 509020 510070 547600 552720 594570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 337840000 24701 1637 23181 46400;46401 37389;37390 37389 2 9606 Homo sapiens -0.023196990220640146 SIEAVHEDIR Unmodified 1167.5884 0.58840088 3498 Q6FGU2;P23919;Q53F55;P23919-2;H7C312;H7BZ20 DTYMK Thymidylate kinase yes no 0 0 0 1.5 0.5 1 1 38.135 38.198 3 2.5915E-06 8978 20230619_1881_Aki_TMTPro18x_K_F2 173.24 131.13 236360 149220 227570 226240 262630 309980 259270 272900 286600 278070 300190 331590 338950 271130 274720 279800 375540 306160 218170 137380 232450 223150 270130 306070 262530 281400 291040 282380 309220 331980 341620 282210 286020 282550 357860 290760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 564130000 24702 3498 23182 46402;46403 37391;37392 37392 2 9606 Homo sapiens 0.011310211496947886 SIEDMTEEAFQK Unmodified 1426.6286 0.62861071 1507 P14735;A0A7I2V610;A0A3B3ISG5;A0A7I2V2P6;A0A7I2V3E3;A0A7I2YQV5;Q59GA5;P14735-2;B3KSB8;B7Z7W6;A0A7I2V3K9 IDE Insulin-degrading enzyme yes no 0 0 0 3.5 0.5 1 1 60.764 60.779 3 1.2219E-05 18751 20230619_1882_Aki_TMTPro18x_K_F3 109.24 98.292 43948 34091 41673 42068 38891 50243 43609 42988 49246 51878 46798 49685 53821 42665 45905 56368 49085 52564 40607 31285 42490 41936 40811 50002 43882 44654 49791 51887 48454 50292 54312 44978 47054 56181 46958 49953 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59498000 24703 1507 23183 46404;46405 37393 37393 1 9606 Homo sapiens -0.06763845032673999 SIEEIVR Unmodified 844.46543 0.46543219 3568 Q6FHX6;P39748;B4DWZ4;P39748-2;I3L3E9 FEN1 Flap endonuclease 1 yes no 0 0 0 3.5 0.5 1 1 46.033 46.093 2 0.01408 12210 20230619_1883_Aki_TMTPro18x_K_F4 113.1 20.426 244480 220230 219710 246610 209060 263050 263880 226540 298590 288680 293170 275960 320050 261950 261680 338100 338950 319690 226010 201800 225320 247110 219800 263920 263870 235760 302010 288140 302060 280390 323030 274750 271800 337270 323430 303910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1237600000 24704 3568 23184 46406;46407 37394 37394 1 9606 Homo sapiens 0.03697809489096926 SIEEQLGTEIKPIPSNIDK Unmodified 2110.1158 0.11576462 2256 P26196;B2R858 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 1 6.2 0.748 1 2 2 57.81 57.872 3;4 9.0401E-11 17208 20230619_1886_Aki_TMTPro18x_K_F6 141.6 128.37 192570 177850 203860 235800 176340 201690 216130 208900 217350 248350 252820 253330 259050 227460 238930 286400 258240 265620 178290 163230 205940 232880 186380 206680 215750 214080 222910 248950 258020 256130 263280 238530 244650 285570 246950 252480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 742750000 24705 2256 23185 46408;46409;46410;46411;46412 37395;37396;37397 37395 3 9606 Homo sapiens 0.10511137267303639 SIEEQQKPLTDSQR Unmodified 1657.8271 0.8271276 1948 A4FVC0;Q9UKV8-2;Q9UKV8 EIF2C2;AGO2 Protein argonaute;Protein argonaute-2 yes no 0 0 1 4 0 1 38.867 38.91 3 8.9733E-09 9095 20230619_1883_Aki_TMTPro18x_K_F4 184.11 159.64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24706 1948 23186 46413 37398 37398 1 9606 Homo sapiens 0.024527118705009343 SIEGCCICR Unmodified 1153.4678 0.46783351 2678 H0YGG0;F5H6U2;F5GZ82;B7Z287;Q9NP50 FAM60A Protein FAM60A yes no 0 0 0 5 0 1 38.969 39.06 2 0.00013241 9140 20230619_1885_Aki_TMTPro18x_K_F5 150.35 137.36 57812 46246 53027 55054 54869 60394 58567 58052 75473 62779 61750 48233 66498 56136 44820 73102 71759 66026 53413 42419 54303 54956 56983 60620 59355 59587 75361 62800 64082 49978 66721 58553 47598 72703 68359 62808 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40214000 24707 2678 23187 46414 37399 37399 1 9606 Homo sapiens -0.10276169431404014 SIEGTADDEEEGVSPDTAIR Unmodified 2089.9288 0.92875172 3001 G1UI16;Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 0 1 0 1 47.842 47.842 2 5.2575E-46 13467 20230619_1880_Aki_TMTPro18x_K_F1 318.95 265.38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24708 3001 23188 46415 37400 37400 1 9606 Homo sapiens -0.07261551078863704 SIEIPRPVDGVEVPGCGK Unmodified 1907.9775 0.977497 2658 B5BU25;P26368-2;P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 0 0 1 7 0 2 53.735 53.803 3;4 4.5725E-06 15224 20230619_1887_Aki_TMTPro18x_K_F7 101.67 99.544 641220 520710 639980 675350 590190 695730 729070 706590 736840 844590 744720 757900 922380 734980 802560 922850 855950 926890 592890 477990 649790 669600 620870 702090 727410 724810 751410 843350 771680 772600 929730 769240 821830 924210 818940 880060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3317799999.9999995 24709 2658 23189 46416;46417 37401;37402 37402 2 9606 Homo sapiens 0.05982735537781991 SIELESVR Unmodified 931.49746 0.4974606 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 0 3 0.816 1 1 1 44.352 44.419 2 7.6441E-05 11570 20230619_1882_Aki_TMTPro18x_K_F3 183.74 106 449320 357870 367220 371690 286210 302140 262320 219740 215160 379080 583000 643810 433380 454090 561980 446520 641080 618840 414780 327850 378490 373490 303070 309270 265000 235020 236680 382260 574950 634770 453670 473890 572900 458880 612460 586030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 402860000 24710 1958 23190 46418;46419;46420 37403 37403 1 9606 Homo sapiens 0.028971771722467565 SIELFYK Unmodified 898.48002 0.48001963 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 8 0 1 58.591 58.637 2 0.068933 17247 20230619_1888_Aki_TMTPro18x_K_F8 77.674 39.436 428170 340150 437480 457260 376430 429010 437630 372320 545980 505010 472640 517550 528830 468390 483660 615820 533210 629760 395920 312400 442830 451690 397710 434640 441000 388200 547210 503890 491160 523140 536030 492540 496120 616810 510370 597650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 273370000 24711 3758 23191 46421 37404 37404 1 9606 Homo sapiens 0.026718816372408583 SIEPGSDYYELSDTR Unmodified 1730.7635 0.76352429 275;1599 A0A024R3Z1;Q6NYC5;A0A669KB77;P11137-3;P11137 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 0 2 0 1 51.196 51.241 3 1.8128E-10 15005 20230619_1881_Aki_TMTPro18x_K_F2 147.51 136.56 67724 56545 64504 60823 59398 66917 68502 71411 87538 84364 81164 75380 92453 71605 88320 85026 86220 93153 62606 51808 65695 61203 62392 67328 69147 72961 87866 84303 84037 76819 93750 74760 89748 85693 82563 88366 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144290000 24712 275;1599 23192 46422 37405 37405 1 9606 Homo sapiens -0.0726269335723373 SIEQSIEQEEGLNR Unmodified 1630.7798 0.77984305 992 A0A0C4DFZ1;A8MZ54;Q75ME0;Q16623-3;Q16623-2;Q16623 STX1A Syntaxin-1A yes no 0 0 0 1 0 1 51.811 51.811 3 2.8157E-16 15091 20230619_1880_Aki_TMTPro18x_K_F1 195.71 152.41 22269 20346 24482 26742 18585 19050 21670 21669 21336 21365 28517 24447 23684 20804 24897 26862 25679 22541 20624 18672 24605 26381 19830 19912 21684 21967 22025 21695 28685 24585 24383 21887 25349 26652 24540 21467 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53621000 24713 992 23193 46423 37406 37406 1 9606 Homo sapiens -0.010315674004687025 SIEVIENR Unmodified 958.50836 0.50835964 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;P49321-2;Q5T626;Q5T624;Q9P1N1;O95138;H0YDS9;H0YF33;E9PRH9 NASP Nuclear autoantigenic sperm protein yes no 0 0 0 2.5 0.5 1 1 43.063 43.136 2 0.00059112 10940 20230619_1882_Aki_TMTPro18x_K_F3 160.54 97.559 905800 775780 766360 799900 940210 987080 820980 797860 993060 1007700 1082000 1065100 1129200 935590 899530 1170100 1203100 974050 836750 710470 792720 808560 959900 980200 840190 833820 1005900 1009200 1107600 1074500 1140200 981480 936900 1160400 1146600 928070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2665700000 24714 3605 23194 46424;46425 37407;37408 37408 2 9606 Homo sapiens 0.02744579546526893 SIFDHIK Unmodified 858.45995 0.45995289 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8;Q9NYF8-4;E9PJA7 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 0 1 0 1 48.623 48.623 3 0.0019798 13780 20230619_1880_Aki_TMTPro18x_K_F1 122.13 32.986 176500 153460 172910 206500 206470 234020 215920 220470 211380 155670 156480 140410 152830 126070 172560 151690 152340 140080 163250 140890 176680 204460 212050 234160 217000 224440 213280 160400 162950 142860 157010 131900 173880 151460 145870 133220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225460000 24715 4629 23195 46426 37409 37409 1 9606 Homo sapiens 0.02506130697270237 SIFEGGATELYYVLK Unmodified 1688.8661 0.86613887 1602 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70 LDB1 LIM domain-binding protein 1 yes no 0 0 0 8 0 1 64.879 64.898 3 6.0795E-06 19864 20230619_1888_Aki_TMTPro18x_K_F8 116.51 102.28 19438 14094 16548 20209 12915 20160 18255 14600 17066 18559 22567 21488 23414 21150 19209 19545 18777 22726 17939 12958 17025 19889 13894 20243 18061 15429 17670 18640 22923 21670 23670 21741 19587 19848 17997 21537 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19811000 24716 1602 23196 46427 37410 37410 1 9606 Homo sapiens 0.049260441721799 SIFLVAHR Unmodified 941.54469 0.54468557 2451 B4DDB9;E9PI68;Q15005;E9PL01;H0YE04 SPCS2 Signal peptidase complex subunit 2 yes no 0 0 0 4.5 0.5 1 1 45.069 45.13 3 0.00012797 11675 20230619_1885_Aki_TMTPro18x_K_F5 163.67 98.911 62700 54851 54393 53634 71656 83807 68462 72438 90125 22734 24288 20424 24362 17937 35355 20680 22535 19068 57939 50208 56209 54694 73074 82192 69831 73426 87747 25703 28021 20811 25385 18743 34967 20698 21661 18141 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87079000 24717 2451 23197 46428;46429 37411;37412 37412 2 9606 Homo sapiens 0.07157501233882613 SIFQHIQSAQSQR Unmodified 1528.7746 0.77463852 1525 A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 0 0 0 4 0 1 42.641 42.685 3 0.058973 10699 20230619_1883_Aki_TMTPro18x_K_F4 52.101 36.561 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24718 1525 23198 46430 37413 37413 1 9606 Homo sapiens 0.03140218318230836 SIFSGIGSTAEPVSQSTTSDYQWDVSR Unmodified 2904.3414 0.34136048 567 A0A024R9D2;Q86UE4;H0YBJ8 MTDH Protein LYRIC yes no 0 0 0 6.5 0.5 1 1 62.156 62.199 3 1.1418999999999998E-28 19111 20230619_1886_Aki_TMTPro18x_K_F6 171.32 164.04 20861 15814 20999 19591 38494 22565 24984 21911 25028 26094 25037 24311 27835 29078 24489 24767 28925 31944 19282 14514 21546 19520 38074 22635 25969 22546 25535 26102 25807 24916 28200 29602 25207 25363 27653 30253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215160000 24719 567 23199 46431;46432 37414 37414 1 9606 Homo sapiens -0.03463654862025578 SIFTPTNQIR Acetyl (Protein N-term) 1217.6404 0.64043645 1128 A0A0S2Z5I7;Q9Y3A5;A0A8V8TMR6;A0A8V8TLR8;F8WE72;A0A0S2Z5F7;A0A8V8TLS5;A0A8V8TN15 SBDS Ribosome maturation protein SBDS yes no 1 0 0 7 0 1 56.441 56.499 2 0.00014172 16293 20230619_1887_Aki_TMTPro18x_K_F7 102.95 84.167 28959 24787 28712 30238 22881 27444 30460 32404 35539 27038 28057 27793 30436 25470 30113 29702 29577 29047 26784 22735 29112 30064 24453 28073 30438 32619 35589 27645 29248 28114 30972 26574 30594 29748 28300 27598 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80957000 24720 1128 23200 46433 37415 37415 1 9606 Homo sapiens 0.04032184563448027 SIFVTCGDWDLK Unmodified 1439.6755 0.67550132 1515 B4DEX5;F6QUN3;H0Y4B0;F6UGJ8;B4DN03;A0A3B3ISV9;O43414-3;O43414-2;O43414 PRNPIP;ERI3 ERI1 exoribonuclease 3 yes no 0 0 0 7.5 0.5 1 1 62.478 62.508 3 8.0883E-05 18949 20230619_1887_Aki_TMTPro18x_K_F7 113.65 85.443 113980 99250 115780 111750 109300 126580 130690 113450 133680 124320 138340 135440 145890 122650 122590 149760 158080 155530 105450 90958 117360 112070 114640 126590 130610 117160 136170 125430 142020 136620 147570 128390 127170 150300 150890 147670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 266660000 24721 1515 23201 46434;46435 37416;37417 37416 2 9606 Homo sapiens -0.026749406909175377 SIFYVPDMKPSMFDVSR Unmodified 2017.9642 0.96415513 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q8N9Z3;Q5CAQ4;I3L0K7;I3L239 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 1 3 0 1 62.655 62.685 3 2.9652E-09 19528 20230619_1882_Aki_TMTPro18x_K_F3 134.13 110.33 207950 177310 212520 229050 153040 208310 211650 204330 194470 257070 239710 232170 237230 197090 271050 218250 211280 189440 192370 162730 214760 226780 165450 212040 209620 210510 201160 256060 243790 235520 243660 205580 271430 217600 202580 180320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268690000 24722 1211 23202 46436 37418 37418 1 9606 Homo sapiens -0.004108385658355473 SIGDLGAR Unmodified 787.41882 0.41881635 4447 Q9BV20 MRI1 Methylthioribose-1-phosphate isomerase yes yes 0 0 0 5 0 1 40.863 40.951 2 0.00070062 9914 20230619_1885_Aki_TMTPro18x_K_F5 125.81 53.865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24723 4447 23203 46437 37419 37419 1 9606 Homo sapiens 0.016603696578044946 SIGEYDVLR Unmodified 1050.5346 0.53457439 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 3.5 0.5 1 1 50.51 50.563 2 0.01595 14402 20230619_1882_Aki_TMTPro18x_K_F3 74.376 53.475 117810 99087 126330 127130 115750 140900 143290 123750 146640 136920 133690 135600 142590 122490 130570 148490 145890 147640 109020 90937 127490 126250 121850 141000 142950 128030 148680 137670 138190 137280 144700 128160 133930 148710 139450 140230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1218800000 24724 3758 23204 46438;46439 37420 37420 1 9606 Homo sapiens 0.011328487179980584 SIGRPELK Unmodified 898.52362 0.52361577 698 A0A024RBX6;O00625 PIR Pirin yes no 0 0 1 1 0 1 39.134 39.134 3 0.014581 9698 20230619_1880_Aki_TMTPro18x_K_F1 72.879 39.987 316470 262670 313140 329970 383430 433770 387850 359440 445460 411070 459130 454200 485470 410090 429450 483740 516680 426170 292630 241020 319570 328990 392950 429010 392500 373760 451040 414160 471520 457770 492030 428240 442750 481630 492880 405720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194210000 24725 698 23205 46440 37421 37421 1 9606 Homo sapiens 0.07029491134369437 SIGTANRPMGAGEALR Oxidation (M) 1615.81 0.81003775 3823 Q12906-7;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;Q59GP7;K7EQR9 ILF3 Interleukin enhancer-binding factor 3 yes no 0 1 1 5.33 3.09 1 1 1 35.101 35.121 3 1.112E-05 7527 20230619_1888_Aki_TMTPro18x_K_F8 109.5 84.203 448720 337180 364750 415680 460800 472590 459930 455540 512840 455250 480260 427720 498990 411190 415680 551740 460390 403570 414060 309450 379220 414060 470970 473270 465350 466520 518100 459410 494670 435380 504670 431970 427370 543560 439670 385090 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1833399999.9999998 24726 3823 23206 46441;46442;46443 37422;37423;37424;37425 37424 2505 4 9606 Homo sapiens 0.02676512783727958 SIGTANRPMGAGEALR Unmodified 1599.8151 0.81512312 3823 Q12906-7;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;Q59GP7;K7EQR9 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 1 3.67 3.09 1 1 1 38.527 38.544 3 9.2727E-26 9416 20230619_1880_Aki_TMTPro18x_K_F1 230.97 166.75 334400 237660 291820 310680 291920 372510 337880 349130 390420 331950 331370 329150 364170 312220 331670 344450 366110 331640 308630 218300 300170 308530 305010 371260 339660 357760 392300 336460 344210 333740 369160 324310 339780 344920 349720 315250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 979440000 24727 3823 23206 46444;46445;46446 37426;37427;37428 37426 3 9606 Homo sapiens 0.03920816646359526 SIGTANRPMGAGEALRR Oxidation (M) 1771.9111 0.91114877 3823 Q12906-7;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;Q59GP7;K7EQR9 ILF3 Interleukin enhancer-binding factor 3 yes no 0 1 2 4 0.816 1 1 1 32.047 32.12 4 2.4143E-09 6407 20230619_1882_Aki_TMTPro18x_K_F3 135.58 117.7 116550 113740 138940 126860 274030 163060 174440 216120 127120 115630 161200 121020 110000 109920 213290 108770 129400 108340 108070 104190 141050 127660 269960 163730 180340 214220 133580 122260 161510 122470 118800 113610 209860 109660 124470 102980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 211550000 24728 3823 23207 46447;46448;46449 37429;37430 37429 2505 2 9606 Homo sapiens 0.05606964486423749 SIGTANRPMGAGEALRR Unmodified 1755.9162 0.91623415 3823 Q12906-7;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;Q59GP7;K7EQR9 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 2 4.5 0.5 1 1 34.958 35.028 4 6.1196000000000006E-30 7542 20230619_1885_Aki_TMTPro18x_K_F5 230.82 196.52 23243 28629 30177 27377 31754 29470 30048 31707 30719 28699 28626 27790 29652 23838 30796 28701 31888 28642 21613 26174 30077 27811 32744 29727 30434 32150 31183 29132 29519 28125 30277 24986 31342 28770 30477 27217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102370000 24729 3823 23207 46450;46451 37431 37431 1 9606 Homo sapiens 0.06851268349055317 SIGTCNRPLGAGEALR Unmodified 1670.8522 0.85223691 1133 A0A0S2Z5K8;V9HWK4;Q96SI9-2;Q96SI9 HEL162;STRBP Spermatid perinuclear RNA-binding protein yes no 0 0 1 1.5 0.5 1 1 40.212 40.249 3 3.9256E-06 10209 20230619_1880_Aki_TMTPro18x_K_F1 116.11 79.341 29592 22214 27765 29684 24527 26612 27781 24926 29179 25227 25114 26833 32340 25391 28907 28093 33660 29032 27335 20405 28316 29320 25818 27105 27869 25613 29485 25539 26292 27117 32606 26394 29708 28246 32127 27581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68194000 24730 1133 23208 46452;46453 37432 37432 1 9606 Homo sapiens 0.04364488192072713 SIGVPIK Acetyl (Protein N-term) 754.45889 0.45889025 3720 P62318;P62318-2;H3BT13 SNRPD3 Small nuclear ribonucleoprotein Sm D3 no no 1 0 0 6.5 1.5 1 1 55.679 55.743 2 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28961000 24731 3720 23209 46454;46455 0 9606 Homo sapiens 0.07183916328381201 SIGYDDTDESHCAEHIESR Unmodified 2219.9026 0.90255374 4102 Q6FHZ7;Q99541;B4DJK9;B4DNH6 ADFP;PLIN2 Perilipin;Perilipin-2 yes no 0 0 0 1.5 0.5 1 1 37.575 37.606 4 1.2916E-24 9035 20230619_1880_Aki_TMTPro18x_K_F1 205.62 202.43 50971 43261 51347 59516 61807 64520 59798 59984 68907 65358 56796 64161 69647 55049 53183 69304 78354 72186 47145 39732 52331 58810 63294 64758 60686 61741 69247 65736 59443 64854 69899 57868 55842 69525 74683 68555 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 110220000 24732 4102 23210 46456;46457 37433;37434 37433 2 9606 Homo sapiens -0.15860143522058934 SIIECVDDFR Unmodified 1252.5758 0.57578728 1873 B4DWG1;A0A994J542;B3KM47;Q9Y6Y8;Q9Y6Y8-2;H7C0V8 SEC23IP SEC23-interacting protein yes no 0 0 0 3 0 1 57.357 57.389 2 0.0017108 17379 20230619_1882_Aki_TMTPro18x_K_F3 103.01 73.532 63653 58259 66481 71954 51547 68177 75757 78621 67668 80009 77992 77378 90749 77351 65273 95971 86635 96540 58923 53430 67131 71508 55413 69438 74769 79630 69863 80665 80072 78713 91017 80785 68175 96078 82754 91652 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66928000 24733 1873 23211 46458 37435 37435 1 9606 Homo sapiens -0.04039758304861607 SIIKEPESAAEAVK Unmodified 1470.793 0.79297392 364 Q9H072;A0A024R5X7;O76031;H0YM48;H0YK07 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes no 0 0 1 6 0 1 48.677 48.756 3 0.00035583 13361 20230619_1886_Aki_TMTPro18x_K_F6 93.51 75.097 45217 44692 52562 53610 61351 58064 69584 64071 45650 56315 62106 38485 39133 27003 75441 31342 39886 23450 41921 40966 52924 53485 63076 58542 68950 64832 48536 56726 61866 39536 42297 28496 73863 31137 38393 22417 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21375000 24734 364 23212 46459 37436 37436 1 9606 Homo sapiens 0.07640915449542263 SIILEGFK Unmodified 905.52222 0.52221879 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72;Q6IPS5;A0JLM9;Q32Q15;Q05D74;Q6P712 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 4.5 3.5 1 1 60.045 60.063 2 0.0012314 18491 20230619_1880_Aki_TMTPro18x_K_F1 164.53 56.934 241380 203870 194240 215230 216640 258050 243580 233420 278020 154060 147840 100280 122680 94438 208910 143390 132830 81796 222880 186760 201740 217060 224280 257140 244960 238050 275680 158570 156580 104310 130030 100190 206340 140100 127480 78530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 154580000 24735 128 23213 46460;46461 37437;37438 37437 2 9606 Homo sapiens 0.0656785704561571 SIILTHVIR Unmodified 1050.655 0.6549643 1941 Q92556;A4D1X5;B4DJV6;H7C0S6;H7C3P3;H7C0N5 ELMO1 Engulfment and cell motility protein 1 yes no 0 0 0 5 0 1 46.876 46.953 3 6.3131E-06 12463 20230619_1885_Aki_TMTPro18x_K_F5 168.26 168.26 45717 40512 64324 54181 71821 82901 77466 75082 87690 63480 59496 60753 64782 55228 63506 67182 67635 76042 42438 37189 63865 53981 74138 81439 78071 76903 87581 64747 62625 61626 65909 57807 64850 67801 64731 72101 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94081000 24736 1941 23214 46462 37439 37439 1 9606 Homo sapiens 0.13166301502246824 SIIPLPHPVRPEDIE Unmodified 1710.9305 0.93047046 3699 P61599;A8MZB2 NAA20 N-alpha-acetyltransferase 20 yes no 0 0 1 5.5 0.5 1 1 54.818 54.89 3 0.0010475 15834 20230619_1885_Aki_TMTPro18x_K_F5 79.337 62.666 81775 70666 81479 93558 84058 83574 85807 85088 100060 101310 100430 102690 102090 90303 112360 106580 109740 99719 75639 64869 82888 92453 87096 85329 86880 87289 101180 101560 103150 103750 104650 94392 113900 106490 104950 94823 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 160020000 24737 3699 23215 46463;46464 37440;37441 37440 2 9606 Homo sapiens 0.10344244049019835 SIISMFDR Unmodified 967.4797 0.47970205 3297 Q53FC3;O75340;O75340-2 PDCD6 Programmed cell death protein 6 yes no 0 0 0 1.5 0.5 1 1 59.811 59.811 2 0.0019893 18387 20230619_1880_Aki_TMTPro18x_K_F1 133.86 91.97 75251 53697 66940 82473 70966 109860 77178 72852 93620 84689 79579 92210 95585 84917 83814 105570 98759 130820 69463 49414 68885 81183 73859 108040 77948 77322 93902 85252 83097 93006 96538 88957 86391 107080 94570 123870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100020000 24738 3297 23216 46465;46466 37442;37443 37442 2 9606 Homo sapiens -0.005338613542562598 SIITYVSSLYDAMPR Unmodified 1714.86 0.86000763 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1 PLEC Plectin yes no 0 0 0 5 0 1 65.643 65.687 3 8.1819E-08 20460 20230619_1885_Aki_TMTPro18x_K_F5 133.14 119.47 6287.1 5925 5784.8 6397 7098.9 4701.5 9206.6 10131 8095.5 8613.6 8615.6 6494.8 8316.7 7994 8799 9285.3 7859 10249 5815.1 5426.5 5940.4 6408.3 7296.3 5017.2 9126.1 9927.9 8332.9 8715.1 8791.5 6753 8525 8265.7 8891 9362.1 7545.1 9715.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20824000 24739 3921 23217 46467 37444 37444 1 9606 Homo sapiens 0.03117202669022845 SILAEYK Unmodified 822.44872 0.4487195 4705 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 7.5 0.5 1 1 51.509 51.586 3 0.038285 14197 20230619_1888_Aki_TMTPro18x_K_F8 69.998 32.905 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24740 4705 23218 46468;46469 37445;37446 37446 2 9606 Homo sapiens 0.030393086031381245 SILCCLR Unmodified 920.45719 0.45719247 647 A0A024RB32;Q15185-4;Q15185;A0A087WYT3;B3KUY2;Q15185-3 PTGES3 Prostaglandin E synthase 3 yes no 0 0 0 3.5 0.5 1 1 49.46 49.516 2 0.0077204 13852 20230619_1882_Aki_TMTPro18x_K_F3 122.98 43.863 1494600 1469700 1313500 1046200 1569400 2329100 1507500 1529400 2284300 167890 163760 232870 220620 208760 513380 246950 241860 228960 1382400 1341800 1352300 1109800 1615100 2238900 1545900 1580300 2191700 249580 271350 233770 238340 217960 500410 247430 233950 217700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2740300000 24741 647 23219 46470;46471 37447;37448 37447 2 9606 Homo sapiens -0.006217840235308358 SILEIMHK Unmodified 969.53174 0.53173762 3211 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 1.5 0.5 1 1 53.853 53.867 3 0.00057918 16124 20230619_1881_Aki_TMTPro18x_K_F2 132.9 25.433 194140 165800 184910 173110 150400 185210 199330 201920 212510 208380 184590 193330 234100 184060 199350 234290 210390 223420 179500 151860 188050 174550 160420 186770 198600 205260 214730 209780 192950 196660 235610 192910 204130 233920 201280 212280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181490000 24742 3211 23220 46472;46473 37449;37450 37450 2 9606 Homo sapiens 0.045753020594929694 SILEIMHK Oxidation (M) 985.52665 0.52665224 3211 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 1 0 8 0 1 45.273 45.301 3 0.037293 11606 20230619_1888_Aki_TMTPro18x_K_F8 53.775 25.032 55721 39463 49483 51551 60097 57282 60188 59948 65479 60937 61551 63771 63800 57511 60452 74454 72016 65968 51433 36249 50948 51147 61528 57568 60842 61080 66260 61621 63458 64421 64924 60396 62245 74034 68751 62769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30776000 24743 3211 23220 46474 37451 37451 1889 1 9606 Homo sapiens 0.0333099819687277 SILEQLAEK Unmodified 1029.5706 0.57062555 2980 F8VPD4;P27708;Q53SY7;H7C3Z5 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 6.8 0.748 2 2 1 60.662 60.709 2;3 0.00013929 18100 20230619_1887_Aki_TMTPro18x_K_F7 161.63 68.472 177210 155320 166390 170150 166710 209820 180500 171290 197050 222980 216510 225820 247410 207670 229200 266160 232180 250420 163850 142300 169980 171170 173740 208270 181740 179050 200780 222680 222670 228530 250630 217900 233760 265540 222240 237950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 372300000 24744 2980 23221 46475;46476;46477;46478;46479 37452;37453 37453 2 9606 Homo sapiens 0.05702305894828896 SILEYLR Unmodified 892.50182 0.5018177 4224 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 1.5 0.5 1 1 59.333 59.339 2 0.0085426 18366 20230619_1881_Aki_TMTPro18x_K_F2 120.52 24.473 124880 117860 116780 136170 136000 160840 156550 157010 172930 78495 76819 64263 61675 55890 126580 83301 86494 61279 115520 108010 119750 136340 140390 160650 157060 158560 171090 83261 82741 65744 66560 59339 125110 82183 82969 58529 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80704000 24745 4224 23222 46480;46481 37454 37454 1 9606 Homo sapiens 0.05126686385813173 SILFVPTSAPR Unmodified 1186.671 0.67100829 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;A0A7P0TBC2 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 4.2 0.748 1 2 2 55.741 55.779 2;3 1.5819E-05 16539 20230619_1883_Aki_TMTPro18x_K_F4 172.98 140.76 647840 528510 514100 597220 635260 768790 700310 705770 928260 299840 282610 218630 225570 198550 456950 312470 286150 196610 598010 484490 535850 599750 653260 762720 708680 714430 904880 323560 317880 225670 243290 211350 450340 306190 274820 188290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1601099999.9999998 24746 3452 23223 46482;46483;46484;46485;46486 37455;37456 37455 2 9606 Homo sapiens 0.08513962948495646 SILLSVPLLVVDNK Unmodified 1508.9178 0.91778051 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 3.5 0.5 1 1 65.534 65.557 3 7.1535E-12 20622 20230619_1883_Aki_TMTPro18x_K_F4 181.98 165.2 42610 33718 37961 47339 38187 44964 45154 48708 55187 42538 39429 39166 45466 40141 41733 45865 52047 57156 39356 30982 39014 46638 39881 45712 45431 49334 55000 43242 41462 39962 46065 41699 43094 46613 49734 54149 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 33409000 24747 3647 23224 46487;46488 37457;37458;37459 37459 3 9606 Homo sapiens 0.18367832656736027 SILPTAPR Unmodified 853.50215 0.50215205 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;F8VX11;F8VP89;F8VSC7;F8W0K0;F8VYE9;F8VRU1 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 0 2 0.816 1 1 1 44.217 44.295 2 0.0013766 11816 20230619_1881_Aki_TMTPro18x_K_F2 143.61 83.252 540980 454890 533390 544420 458840 582850 561620 521250 648180 589900 535880 526470 565920 438940 537190 657520 605600 483440 500260 417180 541510 543020 485950 584930 562980 538760 650960 590720 556410 534550 575120 467190 551160 647170 577920 461470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 498710000 24748 2578 23225 46489;46490;46491 37460;37461 37461 2 9606 Homo sapiens 0.06954106105649771 SILSEAPGK Unmodified 900.49165 0.49164694 1907 B4DE24;A1PUM0;Q969V5 MUL1 Mitochondrial ubiquitin ligase activator of NFKB 1 yes no 0 0 0 7 0 1 47.854 47.942 2 0.0027127 12566 20230619_1887_Aki_TMTPro18x_K_F7 103.87 27.738 62169 44667 54642 48655 58788 57263 68783 68779 91771 82021 91891 93166 92387 74999 82720 98139 104550 108220 57385 40955 56158 48977 60996 57550 69472 69799 92149 82526 94290 93477 93816 79214 85576 98758 99844 102670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 242520000 24749 1907 23226 46492 37462 37462 1 9606 Homo sapiens 0.03742078660570769 SILSPGGSCGPIK Unmodified 1271.6544 0.65437195 2144;1327 A0A1W6S962;X5D7Q9;P78347-5;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52 GTF2I General transcription factor II-I no no 0 0 0 2.5 0.5 1 1 50.957 51.015 3 5.7695E-05 14906 20230619_1881_Aki_TMTPro18x_K_F2 110.38 91.634 340500 283590 310210 317290 324180 383280 341250 351860 402920 203930 181330 204800 234630 197570 266750 255720 272090 280500 314650 259920 317920 318620 336430 381800 344910 357670 397650 214450 199130 207790 239440 207180 270910 257440 260340 266120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 417240000 24750 1327;2144 23227 46493;46494 37463;37464 37463 2 9606 Homo sapiens 0.029410940002662755 SILTDNPTWIIDPIDGTTNFVHR Unmodified 2624.3235 0.32346599 489 A0A024R830;A0A140VJL8;P29218;P29218-3;H0YBL1;E5RG94;E5RHE9;E5RI82;E5RGY4;P29218-2;E5RIP7 IMPA1 Inositol monophosphatase 1 yes no 0 0 0 8 0 1 63.85 63.873 3 4.1976E-17 19470 20230619_1888_Aki_TMTPro18x_K_F8 136 123.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24751 489 23228 46495 37465 37465 1 9606 Homo sapiens 0.07627719464517213 SILTISR Unmodified 788.4756 0.47560295 2037 A8K492;P56192;B4DF61;H0YIP0 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 46.39 46.469 2 0.01446 12521 20230619_1882_Aki_TMTPro18x_K_F3 112.59 21.608 595700 477090 545420 551860 543090 594980 606180 603910 736550 515700 557450 542700 549780 450310 608760 604790 575310 552450 550370 437480 558240 551960 566250 598670 611520 614030 735070 527090 580130 546940 564100 475700 616120 602390 550620 525360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 387170000 24752 2037 23229 46496;46497 37466 37466 1 9606 Homo sapiens 0.07290417214335321 SILTPEGVFILNLVCR Unmodified 1830.0073 0.0073405694 2358 B3KNM8;B4E2X3;C4B4C6;B3KNI0;Q8N6R0-1;Q8N6R0-3;Q8N6R0-4;Q8N6R0;B3KM50;Q8N6R0-2 feat;METTL13 Methyltransferase-like protein 13 yes no 0 0 0 5 0 1 66.29 66.333 3 1.0519E-19 20703 20230619_1885_Aki_TMTPro18x_K_F5 212.17 179.6 8696.2 6045.5 7858.3 8411 8209.6 7059.4 8807.3 8934.1 11791 7223.9 9153.8 7835.8 9019 7542.6 10419 8559.1 11007 9910.2 8027.2 5557.4 8058.3 8283.1 8506.5 7287.6 8936.6 8954.2 11719 7418.9 9504.4 7927 9277.2 7846.9 10591 8666.3 10518 9402.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20261000 24753 2358 23230 46498 37467 37467 1 9606 Homo sapiens 0.12553719273819297 SILTVPWVELGGK Unmodified 1397.7919 0.79185171 1195 A0A140VJQ6;Q9BXB4;Q9GZM0;Q8WYV5 OSBPL11;pp14733 Oxysterol-binding protein-related protein 11;Oxysterol-binding protein yes no 0 0 0 3 0 1 64.343 64.375 3 0.0012781 20281 20230619_1882_Aki_TMTPro18x_K_F3 81.709 60.756 32126 22933 30974 32683 20700 28353 27187 31894 34068 32468 29685 31557 42069 36062 26707 43455 41451 53078 29674 21085 31418 32146 22546 29058 27277 32349 34156 32762 31200 32249 41833 37463 28337 44028 39598 50269 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31499000 24754 1195 23231 46499 37468 37468 1 9606 Homo sapiens 0.1088674587128935 SIMTIVGHTDVVK Oxidation (M) 1414.749 0.74900062 4009 Q9GZL7;Q53T99 WDR12 Ribosome biogenesis protein WDR12 yes no 0 1 0 8 0 1 48.496 48.563 3 0.00083199 12917 20230619_1888_Aki_TMTPro18x_K_F8 84.297 65.053 102860 93438 111310 95849 88642 92889 99884 92675 95710 106070 116500 84390 96415 75911 135180 90234 77409 84829 95246 85550 111920 96664 94076 94226 100010 95076 98585 105790 117540 86454 100750 79388 133350 90300 74674 80601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84697000 24755 4009 23232 46500 37469 37469 2648 1 9606 Homo sapiens 0.05821607751568081 SINEFWNK Unmodified 1036.4978 0.49779495 4547 Q9HBM1;C9JW94 SPC25 Kinetochore protein Spc25 yes no 0 0 0 1 0 1 56.649 56.649 3 0.0076424 17111 20230619_1880_Aki_TMTPro18x_K_F1 72.038 39.684 37386 27348 32527 33299 29437 37999 36419 35498 43163 39152 40249 35484 44828 34327 37123 44387 41443 40428 34509 25099 33412 33206 31072 37998 36525 36534 43465 39276 41594 36181 45217 35997 38163 44201 39603 38445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33043000 24756 4547 23233 46501 37470 37470 1 9606 Homo sapiens -0.018994031079273554 SINFLHQVCHDQTPTTK Unmodified 2024.9738 0.97380861 2625 B4DYP7;Q96CW5-2;Q96CW5;A0A3B3ITE3 TUBGCP3 Gamma-tubulin complex component 3 yes no 0 0 0 1 0 1 45.491 45.491 4 0.00020847 12469 20230619_1880_Aki_TMTPro18x_K_F1 88.551 66.563 49720 40046 41208 49745 44763 52655 48647 49031 54192 49587 55763 58305 57813 52941 50895 50694 60747 58989 45906 36746 42677 49467 46370 52934 49002 50367 54942 50361 57243 58597 58641 54659 52415 51454 58015 55946 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25539000 24757 2625 23234 46502 37471 37471 1 9606 Homo sapiens 0.002320657639302226 SINNPDMR Oxidation (M) 961.42873 0.42872911 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 1 0 3.5 1.12 1 1 1 1 30.805 30.878 2 0.013883 6030 20230619_1881_Aki_TMTPro18x_K_F2 90.601 50.028 62567 41388 70453 62548 63475 68272 64795 66013 67653 66512 88278 86643 83280 72356 79578 63675 99192 80576 57845 38092 70749 61504 66478 68531 65407 67620 69549 67797 89376 86544 84994 74654 81967 65140 94588 76420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 167050000 24758 161 23235 46503;46504;46505;46506 37472;37473 37472 99 2 9606 Homo sapiens -0.053528103991197895 SINNPDMR Unmodified 945.43381 0.43381449 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 3.5 0.5 1 1 35.097 35.149 2 0.00085807 7604 20230619_1883_Aki_TMTPro18x_K_F4 154.49 98.885 253250 177890 252940 255900 207160 238170 218800 230060 280440 310990 354630 347530 362700 315400 273410 238900 403210 367180 233960 163590 256260 251750 219300 241940 222090 237810 285250 311050 360510 349770 365770 322540 286510 248640 384280 347530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 371030000 24759 161 23235 46507;46508 37474;37475 37475 2 9606 Homo sapiens -0.041085065365109585 SINNYNPK Unmodified 948.46649 0.46649483 2661 B5BU99;Q9Y5A9;Q9Y5A9-2 YTHDF2 YTH domain-containing family protein 2 yes no 0 0 0 8 0 1 41.214 41.21 3 0.020217 9964 20230619_1888_Aki_TMTPro18x_K_F8 60.91 41.298 158560 122360 179530 164370 182650 138150 182140 157280 157630 165580 175980 116470 142340 96698 155970 101140 106910 88929 146730 112390 180500 162260 188790 142300 182970 159670 162750 165340 177870 119880 146710 100780 155340 101090 102640 84661 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29182000 24760 2661 23236 46509 37476 37476 1 9606 Homo sapiens -0.009799761420026698 SINPDEAVAYGAAVQAAILMGDK Unmodified 2303.1467 0.14674718 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNX1;B4E1T6 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B no no 0 0 0 5.33 3.09 1 1 1 65.732 65.746 3 9.311E-20 20272 20230619_1888_Aki_TMTPro18x_K_F8 163.64 137.05 23738 19004 19648 32727 24882 29934 30639 31959 34712 32540 36504 39355 45926 38834 30277 53293 49098 50566 21915 17506 20467 31845 25615 30499 30676 32534 35200 33067 37782 39665 45849 40832 32230 53094 46805 48051 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 236930000 24761 1031 23237 46510;46511;46512 37477;37478;37479;37480 37480 4 9606 Homo sapiens 0.04729967309913263 SINPDEAVAYGAAVQAAILMGDK Oxidation (M) 2319.1417 0.1416618 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNX1;B4E1T6 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B no no 0 1 0 8 0 1 64.808 64.829 4 4.3073E-08 19878 20230619_1888_Aki_TMTPro18x_K_F8 101.41 86.484 23224 17880 19654 28685 25987 33889 21540 26614 31365 28530 33178 34336 32740 34477 32029 46968 42688 51096 21440 16458 20414 28110 26445 33677 22293 27735 31463 28926 33943 34637 33456 36194 33257 47175 40798 48457 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23394000 24762 1031 23237 46513 37481;37482 37481 602 2 9606 Homo sapiens 0.0348566344732717 SINPDEAVAYGAAVQAAILSGDK Unmodified 2259.1383 0.13829098 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;P11142-2;Q53HF2;B4E1Q1;A8K7Q2 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 0 0 4.5 2.22 1 1 1 2 1 64.922 64.947 3 2.5653E-53 20049 20230619_1887_Aki_TMTPro18x_K_F7 256.58 237.31 196180 137560 152580 208000 130700 217430 168800 182340 236490 287330 250550 324370 388380 347210 192720 524230 305840 488690 180900 126580 158710 204190 139340 218090 170140 191520 238070 285940 262670 328600 382940 366610 207580 520850 292800 463870 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2445900000 24763 3430 23238 46514;46515;46516;46517;46518;46519 37483;37484;37485;37486;37487 37487 5 9606 Homo sapiens 0.05908736664969183 SINQPVAFVR Unmodified 1129.6244 0.62439245 816 A0A087WUN7;H0YJ40;G3V4X6;G3V2S9;Q9GZT3-2;Q9GZT3;H0YJI1 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial yes no 0 0 0 2.5 0.5 1 1 47.881 47.956 2 1.3812E-07 13461 20230619_1881_Aki_TMTPro18x_K_F2 192.32 157.62 553140 474340 510550 537660 532460 574150 575850 584970 645290 468990 446520 451100 463600 392990 580900 519120 496700 453150 511310 434770 522650 538450 552530 578190 580220 593770 645120 479900 468620 457010 478210 413880 583630 516190 475750 431260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1036199999.9999999 24764 816 23239 46520;46521 37488;37489 37488 2 9606 Homo sapiens 0.06476523117225952 SINQQSGAHVELQR Unmodified 1565.791 0.79101686 507 A0A024R8A7;Q96I24 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 0 0 0 6.33 1.25 1 1 1 35.078 35.122 3 1.2031E-16 7676 20230619_1886_Aki_TMTPro18x_K_F6 208.83 156.25 47648 35845 52391 57541 54015 71889 63683 61350 72851 60187 71721 72467 65520 53320 66808 62602 71194 75503 44073 32997 52905 56471 56324 71296 63926 63382 73585 61283 73381 72357 67113 56147 68132 63495 68105 71560 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 76046000 24765 507 23240 46522;46523;46524 37490;37491;37492;37493 37492 4 9606 Homo sapiens 0.030752994843396664 SIPAGAEPGEK Unmodified 1054.5295 0.52948901 1969 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2 HN1L Hematological and neurological expressed 1-like protein yes no 0 0 0 3.5 0.5 1 1 41.918 41.971 2 4.0038E-07 10428 20230619_1882_Aki_TMTPro18x_K_F3 145.99 114.62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24766 1969 23241 46525;46526 37494;37495 37494 2 9606 Homo sapiens 0.0044054485538254085 SIPAITR Unmodified 756.44939 0.4493882 571 A0A024R9G3;Q9BUN8-2;Q9BUN8;B4E1G1 DERL1 Derlin-1 yes no 0 0 0 1.5 0.5 1 1 41.972 42.012 2 0.024326 10936 20230619_1880_Aki_TMTPro18x_K_F1 99.375 48.743 86823 66997 79095 86863 95638 92169 98755 93387 117590 100090 109000 108520 124260 104800 96375 127570 138190 119240 80195 61514 81275 86155 98047 92858 99945 95521 118350 101100 112880 109720 125050 109420 100960 127270 131690 113410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 211090000 24767 571 23242 46527;46528 37496 37496 1 9606 Homo sapiens 0.061421480428521136 SIPAYLAETLYYAMK Unmodified 1732.8746 0.87459506 3416 V9HWE0;P08758;D6RBL5;D6RBE9 HEL-S-7;ANXA5 Annexin;Annexin A5 yes no 0 0 0 4.5 0.5 1 1 67.094 67.122 3 0.0034005 21256 20230619_1883_Aki_TMTPro18x_K_F4 70.622 45.032 2905.2 2429.8 3307.2 2662.5 4873.6 3333.7 1598.8 2930.5 4102.1 3278.5 3637.6 4720.3 2778.7 2403.6 3467 3525.9 4469.8 7147.1 2689.8 2226.6 3340.5 2680.8 4839.8 3317.6 1885.4 3027.5 4019.8 3338.5 3723.4 4643.2 2898.1 2620.3 3570.1 3725 4285.5 6740.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7384200 24768 3416 23243 46529;46530 37497 37497 1 9606 Homo sapiens 0.037472748171467174 SIPHITSDR Unmodified 1024.5302 0.53015772 2441 B3KXQ5;Q14194 CRMP1 Dihydropyrimidinase-related protein 1 yes no 0 0 0 6 0 1 36.592 36.66 3 1.349E-06 8169 20230619_1886_Aki_TMTPro18x_K_F6 162.88 112.84 39053 32020 33732 42039 42637 37978 38113 38875 38147 33671 40612 44884 37000 32484 34534 38256 41570 50648 36071 29397 34877 41566 43396 38754 38703 39536 38947 34640 41424 44628 37772 34230 35572 39029 39769 47941 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91438000 24769 2441 23244 46531 37498 37498 1 9606 Homo sapiens 0.018873842950824837 SIPICTLK Unmodified 930.52084 0.52083858 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 2.5 0.5 1 1 52.462 52.508 2 0.00058192 15538 20230619_1881_Aki_TMTPro18x_K_F2 160.75 52.508 174370 146560 166020 155910 162650 200190 203490 173340 207570 91123 93609 81686 88988 70785 133310 107580 110220 99293 161200 134270 169280 157350 170450 198430 202790 176820 206270 96446 101260 83158 93091 75345 133360 107120 105610 94437 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 765690000 24770 134 23245 46532;46533 37499 37499 1 9606 Homo sapiens 0.05279899685217515 SIPLAMAPVFEQK Unmodified 1429.7639 0.7639224 1219 A0A140VK12;Q9UBF2;Q9H9B7;Q9UBF2-2;B3KND4;Q9NUP3 COPG2 Coatomer subunit gamma-2;Coatomer subunit gamma yes no 0 0 0 2 0 1 62.572 62.581 3 0.016697 19804 20230619_1881_Aki_TMTPro18x_K_F2 61.212 49.154 51404 43298 51690 62330 47623 66322 55132 56274 74148 62423 65645 66900 66823 62576 68784 75746 71411 78485 47543 39787 52504 61391 50130 66478 55747 58363 74084 62937 67821 67586 68304 65365 70097 76039 68349 74490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56632000 24771 1219 23246 46534 37500 37500 1 9606 Homo sapiens 0.06623099619582717 SIPLDEGEDEAQR Unmodified 1457.6634 0.66341631 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 1 0 1 44.157 44.157 2 2.0614000000000002E-27 11918 20230619_1880_Aki_TMTPro18x_K_F1 247 209.44 98170 84198 88390 106570 108890 107950 111240 113360 125370 120900 134880 150410 148480 126640 127570 166270 166590 165740 90728 77256 91011 105790 111480 109210 112470 115650 127310 122670 138630 150580 150160 133490 132450 166300 159000 157430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168230000 24772 3881 23247 46535 37501 37501 1 9606 Homo sapiens -0.047108859003856196 SIPLDEGEDEAQRR Unmodified 1613.7645 0.76452734 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 1.5 0.5 1 1 39.6 39.635 3 7.683300000000001E-29 9943 20230619_1880_Aki_TMTPro18x_K_F1 209.83 174.17 132280 110140 153210 151960 156060 178410 180910 153870 183870 155200 195820 206480 195820 170630 191510 193470 193420 214810 122490 101160 153970 150340 162490 177790 181030 159050 187470 158400 200460 206090 199660 178370 194940 195250 185200 203720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 466960000 24773 3881 23248 46536;46537 37502 37502 1 9606 Homo sapiens -0.017804341976670912 SIPMTVDFIR Unmodified 1177.6165 0.61652988 1184 Q6LET3;A0A140VJL3;P00492;A0A0H3YEQ7 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes no 0 0 0 1.5 0.5 1 1 60.58 60.585 2 0.0014152 18855 20230619_1881_Aki_TMTPro18x_K_F2 107.56 73.162 136460 113660 125610 122750 88789 124520 117920 120370 134710 118090 115000 108840 131450 107170 141240 138060 133160 120640 126110 104140 127950 123310 96178 125660 117790 123210 135460 119230 119650 110940 134070 112250 142980 137290 127400 114820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 227100000 24774 1184 23249 46538;46539 37503;37504 37504 2 9606 Homo sapiens 0.03482627805442462 SIPPEGLAQSELMR Unmodified 1526.7763 0.776278 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2;K7ER16;K7EK06 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 5 0 1 53.335 53.407 3 0.0012346 15150 20230619_1885_Aki_TMTPro18x_K_F5 53.349 29.006 41979 31363 38495 36810 31588 43969 38960 41284 50263 46047 45391 44707 41968 40273 42947 48424 46794 47832 38769 28771 39290 36835 33655 43837 39220 42475 50357 46253 46649 45299 43026 42101 43899 48484 44743 45433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18421000 24775 4109 23250 46540 37505 37505 1 9606 Homo sapiens 0.033960912919610564 SIPSDPEER Unmodified 1028.4775 0.47745344 823 A0A087WVF4;O14646-2;O14646 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes no 0 0 0 1 0 1 37.07 37.07 2 0.0020245 8828 20230619_1880_Aki_TMTPro18x_K_F1 110.31 68.657 25670 20656 24168 25963 26600 29606 27977 26739 30109 28129 33793 31630 34531 29003 27649 32240 39708 32770 23722 18956 24724 25829 27479 29595 28198 27559 30690 28468 34509 31877 34900 30176 28923 32366 37827 31145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26423000 24776 823 23251 46541 37506 37506 1 9606 Homo sapiens -0.03564618558402799 SIPSMVDGLKPGQR Unmodified 1483.7817 0.78169773 3433 P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2A DNA topoisomerase 2-alpha yes no 0 0 1 3 0 1 51.148 51.218 3 1.7237E-08 14674 20230619_1882_Aki_TMTPro18x_K_F3 150.26 93.309 288000 228420 259240 242840 185870 279120 249680 236420 280970 330200 291120 265640 324440 257150 250860 302360 270030 272220 266030 209310 264610 244670 201280 278450 249130 246980 285170 326720 299420 272280 326410 268050 257730 301320 258200 258870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 404400000 24777 3433 23252 46542 37507 37507 1 9606 Homo sapiens 0.059158148744018035 SIPTDNQIK Unmodified 1014.5346 0.53457439 2531 B4DLR8;Q53G81;P15559-3;P15559-2;P15559;H3BNV2;B4DQP5 NQO1 NAD(P)H dehydrogenase [quinone] 1 yes no 0 0 0 6 0 1 44.062 44.154 2 2.23E-05 11279 20230619_1886_Aki_TMTPro18x_K_F6 168.27 79.123 89045 57301 63819 100330 169000 204200 182570 174950 267980 144470 138900 175600 173860 131480 146350 128370 163040 151140 82035 52847 68840 98980 167920 197750 185570 179820 262670 148850 150340 175170 174990 137000 150110 130410 155750 143360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 324360000 24778 2531 23253 46543 37508 37508 1 9606 Homo sapiens 0.02788848718000736 SIPTLISR Unmodified 885.52837 0.5283668 1074 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;P18754-2;C9JW69 RCC1 Regulator of chromosome condensation yes no 0 0 0 3 0 2 49.422 49.5 2 0.012805 13888 20230619_1882_Aki_TMTPro18x_K_F3 89.142 39.784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24779 1074 23254 46544;46545 37509;37510 37510 2 9606 Homo sapiens 0.08102375277144347 SIPVLAK Unmodified 726.46398 0.46397563 1895 A0M8W4;Q15819;G3V113 UBE2V2 Ubiquitin-conjugating enzyme E2 variant 2 yes no 0 0 0 2.5 0.5 2 2 51.362 51.42 2;3 0.0073597 14790 20230619_1882_Aki_TMTPro18x_K_F3 97.068 34.35 524860 430890 486060 516620 519570 553950 526010 487860 627960 498490 516260 483380 482060 412850 539750 538000 582610 497810 485030 395220 497610 515190 537280 555940 533070 503460 629160 503090 533380 489240 495970 434760 550160 536420 556430 473560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 873060000 24780 1895 23255 46546;46547;46548;46549 37511;37512 37512 2 9606 Homo sapiens 0.08980220190983346 SIQADGLVWGSSK Unmodified 1346.683 0.68302954 271 A0A024R3W7;P24534;A4D1M6 EEF1B2;LOC392793 Elongation factor 1-beta yes no 0 0 0 4.5 3.04 1 1 1 1 56.463 56.497 3 3.2E-09 17024 20230619_1880_Aki_TMTPro18x_K_F1 135.04 115.97 989210 812060 847010 892570 917630 1039500 993070 1011400 1097800 1068000 1082500 1025000 1189200 954350 1036900 1198500 1128300 1122600 913630 744220 873630 897060 950200 1039500 1000300 1036500 1112100 1075100 1115600 1040700 1202700 999920 1063000 1195700 1078600 1067100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7861299999.999999 24781 271 23256 46550;46551;46552;46553 37513;37514;37515 37513 3 9606 Homo sapiens 0.02355534901039391 SIQEIQELDK Unmodified 1201.619 0.6190323 3634 V9HWE8;P52565;J3KTF8;J3QQX2;J3QW41;A0A0S2Z3D9;J3KRE2;J3KRY1;P52565-2;J3KS60 HEL-S-47e;ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 0 0 0 3 0 1 53.304 53.357 3 0.0023418 15643 20230619_1882_Aki_TMTPro18x_K_F3 91.937 56.426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24782 3634 23257 46554 37516 37516 1 9606 Homo sapiens 0.026287547440688286 SIQEIQELDKDDESLR Unmodified 1916.9327 0.93271488 3634 V9HWE8;P52565;J3KTF8;J3QQX2;J3QW41;A0A0S2Z3D9;J3KRE2;J3KRY1;P52565-2;J3KS60 HEL-S-47e;ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 0 0 1 2 1 1 1 52.993 53.023 3 2.7975E-26 15565 20230619_1880_Aki_TMTPro18x_K_F1 239.33 217.8 303750 319510 366140 343480 321110 381670 393120 331310 412630 292740 287430 264180 284100 243900 475480 282720 255180 297000 281850 292520 366000 345580 339010 381960 392680 341150 413890 297350 300980 268910 298990 254380 466920 284910 246570 281790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 821430000 24783 3634 23258 46555;46556 37517;37518 37517 2 9606 Homo sapiens 0.010925832054454077 SIQEIQELDKDDESLRK Unmodified 2045.0277 0.027677899 3634 V9HWE8;P52565;J3KTF8;J3QQX2;J3QW41;A0A0S2Z3D9;J3KRE2;J3KRY1;P52565-2;J3KS60 HEL-S-47e;ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 0 0 2 3.88 1.9 1 1 2 1 1 1 1 50.915 50.971 3;4 1.5966E-13 14143 20230619_1885_Aki_TMTPro18x_K_F5 161.65 138.78 1584800 1335900 1461200 1696400 1282700 1532200 1557400 1481900 1578700 2039100 1974700 1933800 2110600 1840500 1818000 2274500 2054800 2081800 1464700 1225900 1493400 1681100 1354800 1560600 1555700 1533000 1625000 2027000 2013000 1965000 2136200 1924200 1869500 2266600 1963900 1979200 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 15671000000 24784 3634 23259 46557;46558;46559;46560;46561;46562;46563;46564 37519;37520;37521 37521 3 9606 Homo sapiens 0.046965166766312905 SIQFVDWCPTGFK Unmodified 1583.7442 0.74424959 2408;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;P68366-2;P68366 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain no no 0 0 0 2.43 0.904 1 3 2 1 62.996 63.009 2;3;4 5.4045E-06 19667 20230619_1882_Aki_TMTPro18x_K_F3 124.47 111.59 4019500 3339900 4149500 3702500 2804000 4009000 3676700 3556700 3803800 4556200 4483300 4779400 5036600 4567800 4647100 5061300 5060900 5656100 3718000 3060900 4182100 3715600 3048900 4019400 3663800 3692300 3898700 4557300 4594800 4833500 5106200 4744800 4757600 5110400 4842400 5363700 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 14708000000 24785 2408;3747 23260 46565;46566;46567;46568;46569;46570;46571 37522;37523;37524;37525;37526 37524 5 9606 Homo sapiens -0.024272763911994844 SIQLDGLVWGASK Unmodified 1372.7351 0.73506511 2288;2925 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;H0YE58;E9PQC9;P29692;P29692-3;E9PK01;P29692-4;E9PQZ1 EEF1D Elongation factor 1-delta no no 0 0 0 2 0 1 62.485 62.494 2 2.7509E-07 19737 20230619_1881_Aki_TMTPro18x_K_F2 171.29 131.29 151840 122230 145850 143920 151480 189750 185410 166340 210810 210120 180180 193660 211840 155900 195500 208500 211330 207970 140340 112100 148790 144180 158010 187820 185680 172710 212220 209520 187810 195970 214290 164980 200030 208610 202030 197550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109430000 24786 2288;2925 23261 46572 37527 37527 1 9606 Homo sapiens 0.06360698314801994 SIQPEEK Unmodified 829.41815 0.41814765 4586 Q9NRN7;Q9NRN7-2 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes no 0 0 0 3 0 1 38.449 38.502 2 0.014942 8976 20230619_1882_Aki_TMTPro18x_K_F3 116.73 53.24 34242 13815 47446 42728 54033 55152 44101 56854 42422 34294 62335 72672 43695 54565 60522 23268 67297 61221 31664 12915 47158 40895 55254 54806 45067 57336 44031 37015 62305 71343 46099 55173 61406 26146 64282 57769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14867000 24787 4586 23262 46573 37528 37528 1 9606 Homo sapiens -0.0033846978190013033 SIQPEQVQR Unmodified 1083.5673 0.5672715 596 B2R745;A0A024R9W8;B4DSU2;A0A0S2Z514;Q6PML9 SLC30A9 Zinc transporter 9 yes no 0 0 0 4 0 1 35.429 35.477 2 0.0049434 7747 20230619_1883_Aki_TMTPro18x_K_F4 94.309 50.54 31721 14408 26007 33093 39157 29773 35492 37058 48628 39796 48220 48096 46259 44055 28945 50032 45460 52883 29207 13373 27119 31807 39463 30528 36395 37431 48746 40339 49371 48331 46497 45870 30771 50278 43387 50171 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53987000 24788 596 23263 46574 37529 37529 1 9606 Homo sapiens 0.028830558408344586 SIQSGPLK Unmodified 828.47052 0.47051757 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;Q3B7X4;B4E2B5;Q05DN3;D6RAW4 IMMT MICOS complex subunit MIC60 yes no 0 0 0 8 0 1 43.125 43.135 2 0.0032786 10748 20230619_1888_Aki_TMTPro18x_K_F8 119.86 25.561 44482 36077 44766 40610 76887 96452 63592 57210 125290 9953.5 10308 11590 13606 11040 17922 13113 13545 12026 41131 33072 45931 41348 77186 92344 66643 59874 119190 12935 16132 11719 14043 11516 17878 13100 12992 11439 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10002000 24789 3954 23264 46575 37530 37530 1 9606 Homo sapiens 0.04942113351705757 SIQVDGK Unmodified 745.39702 0.39701828 369;3946 H3BSC1;A0A024R5Z8;P62491;H3BMH2;P62491-2;Q15907-2;B4DMN1;Q15907 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B no no 0 0 0 5 0 1 41.726 41.811 2 0.01697 10274 20230619_1885_Aki_TMTPro18x_K_F5 102.51 26.479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24790 369;3946 23265 46576 37531 37531 1 9606 Homo sapiens 0.014135649092395397 SIRDTPAK Unmodified 886.48723 0.48723027 1089;2882 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;Q9BTI9;Q9NX34;A0A024RAP1;V9HVU7;E5RI98 NPM1;CLEC2D Nucleophosmin no no 0 0 1 7 0.816 1 1 1 33.669 33.708 3 0.0099634 6958 20230619_1888_Aki_TMTPro18x_K_F8 83.647 45.409 178960 109460 247330 188110 379530 216990 215610 308070 172350 157370 249540 210510 166250 155410 268760 90967 248420 169460 165740 100950 246860 184030 377450 219690 226040 304060 181120 168460 248710 209510 177210 158730 269330 97461 237340 160420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 456150000 24791 1089;2882 23266 46577;46578;46579 37532 37532 1 9606 Homo sapiens 0.03944614237661881 SIRPDNMSEYSK Oxidation (M) 1441.6507 0.65074314 4305;2659 Q6IT96;B5BU61;Q13547;Q5TEE2;B4DSK9;B7Z3S4;Q92769;Q92769-3;B3KUJ5;H3BM24;A0A7R6V290;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 no no 0 1 1 6 0.816 1 1 1 37.306 37.381 3 0.0021233 8474 20230619_1886_Aki_TMTPro18x_K_F6 85.813 73.453 295420 235000 276670 297180 321490 318230 322020 306040 344930 350690 412680 351150 403950 323970 356550 436420 400720 352820 272980 215680 283360 295280 330140 320030 325410 314750 352800 352060 419380 355980 410150 340980 366270 431870 382640 336170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 735470000 24792 2659;4305 23267 46580;46581;46582 37533;37534 37534 1609 2 9606 Homo sapiens -0.05241620564265759 SIRPDNMSEYSK Unmodified 1425.6558 0.65582851 4305;2659 Q6IT96;B5BU61;Q13547;Q5TEE2;B4DSK9;B7Z3S4;Q92769;Q92769-3;B3KUJ5;H3BM24;A0A7R6V290;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 no no 0 0 1 6.5 0.5 1 1 42.022 42.107 3 0.00010814 10122 20230619_1887_Aki_TMTPro18x_K_F7 113.8 83.991 743590 555820 720650 680810 750080 929700 806560 863650 969540 969570 1081000 952420 1133400 922410 974510 971760 1069900 977350 687030 510090 734320 680700 779370 919400 815330 889170 982960 973820 1105100 967030 1147200 955370 998920 976240 1022100 928570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 873350000 24793 2659;4305 23267 46583;46584 37535 37535 1 9606 Homo sapiens -0.03997316701656928 SIRPGLSPYR Unmodified 1144.6353 0.63529149 3900;2497 Q14697-2;V9HWJ0;B4DJ30;Q14697 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 1 6 0.816 1 1 1 37.987 38.064 3 0.001709 8712 20230619_1886_Aki_TMTPro18x_K_F6 91.549 60.546 99206 110640 90327 76611 179000 327100 138130 141500 334550 40873 28879 39815 37556 30956 43089 34412 40700 30031 91873 100960 93928 83399 179310 307180 147320 154460 316590 47516 44407 40196 38478 32404 43531 34318 38891 28609 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 504160000 24794 3900;2497 23268 46585;46586;46587 37536 37536 1 9606 Homo sapiens 0.06875925491522139 SIRPLLEGR Unmodified 1039.6138 0.61382777 4606 Q9NVP1;Q4ZG72 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 0 1 3 0 1 41.459 41.522 3 0.00054824 10248 20230619_1882_Aki_TMTPro18x_K_F3 99.34 49.896 236010 205490 210340 245980 239270 291530 237780 255830 276480 141340 124070 99695 117580 100190 171690 150140 144480 69497 218120 188440 216480 245640 246540 290430 240990 260720 273040 147980 134160 103360 122860 105870 171990 145670 137980 67138 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 319970000 24795 4606 23269 46588 37537 37537 1 9606 Homo sapiens 0.09560540462780409 SISADDDLQESSR Unmodified 1421.627 0.62703081 1299 A0A1U9X839;A0A1U9X830;P18615;P18615-3;H9ZYJ1;A0A0A0MSN9;B7Z6T4;P18615-4;E9PD43;A0A0A0MT02;A0A0G2JI50;B4DZZ3;A2ABK4 NELFE;NELF-E;RDBP Negative elongation factor E yes no 0 0 0 1 0 1 40.239 40.239 2 1.5159E-28 10194 20230619_1880_Aki_TMTPro18x_K_F1 325.02 281.37 73800 65799 75113 94120 79814 85312 82854 77454 108490 61592 48847 107540 46890 55298 83407 61791 83013 106130 68289 60446 76373 92547 82626 86741 84107 79346 106580 64547 53318 105070 49811 59064 84035 64528 79590 100250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67919000 24796 1299 23270 46589 37538 37538 1 9606 Homo sapiens -0.06691762797117917 SISDMWTMVK Oxidation (M) 1212.5519 0.55188071 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2;H3BPA9;H3BP95;H3BMX0 NUP93 Nuclear pore complex protein Nup93 yes no 0 1 0 8 0 1 56.341 56.398 3 0.042516 16339 20230619_1888_Aki_TMTPro18x_K_F8 45.158 30.186 27607 23735 26356 30942 26757 30308 29229 31124 38329 29982 30548 31403 35466 29015 31925 40183 32788 37173 25526 21785 26911 30641 27851 30710 29611 31711 38203 30422 31929 31757 35869 30599 32622 40006 31393 35323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7044400 24797 4222 23271 46590 37539 37539 2706 1 9606 Homo sapiens -0.04589315062867172 SISFIPPDGEFELMR Unmodified 1736.8444 0.84435757 853 Q96CW1;Q96CW1-2;A0A087WY71;B4E304;E9PFW3;B4DNB9;C9JPV8;C9JGT8;B4DJB1;C9JJD3;H7C4C3;B4DFM1;A0A8I5KWD3;B4DTI4;B7Z4N2 AP2M1 AP-2 complex subunit mu yes no 0 0 0 6 0 1 63.527 63.576 3 9.827E-08 19730 20230619_1886_Aki_TMTPro18x_K_F6 130.61 115.93 22820 22170 28067 25853 23093 29162 25938 29499 30730 28728 31953 33331 31891 31475 34132 35269 32314 35282 21166 20317 27989 25863 24477 29239 26161 30082 31075 29218 32742 33574 32683 32705 34576 35383 30956 33500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79082000 24798 853 23272 46591 37540 37540 1 9606 Homo sapiens 0.00540916151953752 SISIGPISK Unmodified 900.52803 0.52803245 1440 B2R694;A0A384MTQ5;P48449-3;P48449;A0A0G2JQD0;P48449-2 LSS Terpene cyclase/mutase family member;Lanosterol synthase yes no 0 0 0 3 0 2 52.802 52.861 2;3 0.015531 15467 20230619_1882_Aki_TMTPro18x_K_F3 61.78 29.845 67349 58854 61335 71688 49939 60491 54920 75526 62906 77671 89992 66612 74149 71082 83781 87938 91004 88938 62256 53977 62691 71211 52977 62355 55444 76123 64735 77997 90221 68402 76687 74050 85448 88141 86988 84471 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31326000 24799 1440 23273 46592;46593 37541;37542 37542 2 9606 Homo sapiens 0.07378955557283007 SISLYYTGEK Unmodified 1159.5761 0.57610486 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 0 3.67 3.09 1 1 1 53.425 53.439 2 6.626499999999999E-32 15065 20230619_1888_Aki_TMTPro18x_K_F8 234.2 90.914 55074 45475 49610 53213 40031 46438 45577 47058 51104 62653 60033 60829 65156 54035 51956 75264 64857 66305 50886 41700 50722 53028 42525 47499 45845 48461 52168 62404 61390 61621 65708 57080 53908 74719 61940 63067 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 603740000 24800 1658 23274 46594;46595;46596 37543;37544 37544 2 9606 Homo sapiens 0.0026998468665624387 SISNPPGSNLR Unmodified 1140.5887 0.58873523 2828 Q9H4A3-7;Q9H4A3;D3DUP1;F5GWT4;D3DUP2;Q9H4A3-6;Q9H4A3-2;Q9H4A3-5;A0A6Q8PFM0;A5D8Z4;Q9H4A3-4 WNK1 Serine/threonine-protein kinase WNK1 yes no 0 0 0 8 0 1 38.618 38.604 2 3.4535E-09 8910 20230619_1888_Aki_TMTPro18x_K_F8 190.57 157.45 39115 29021 30042 37780 32166 38607 38602 36951 47799 39272 42388 42027 43671 34817 40037 46855 49676 41814 36078 26651 31357 37431 33476 38927 38818 37939 47927 39667 43796 42313 44356 36789 41343 46591 47382 39797 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27834000 24801 2828 23275 46597 37545 37545 1 9606 Homo sapiens 0.02406440869549442 SISSDEVNFLVYR Acetyl (Protein N-term) 1569.7675 0.76748745 4477 Q9BZK7;A0A0D9SF63;A0A1B0GUU2;A0A068L529;C9IYU9;C9JCW4;C9JTW8;C9J7E1;A0A0D9SEW5;C9J903;C9J3H2;C9JEC9 TBL1XR1;TBLR1-RARA fusion F-box-like/WD repeat-containing protein TBL1XR1 yes no 1 0 0 3.5 0.5 1 1 64.158 64.178 2 0.044713 20104 20230619_1883_Aki_TMTPro18x_K_F4 58.37 41.796 25943 20890 25416 31400 29397 30568 31573 30942 33729 30516 28626 33353 33227 26819 30170 32385 29857 33665 23982 19209 25958 30817 30261 30976 31769 31584 34043 30949 29849 33492 33610 28182 30728 32521 28597 31948 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106320000 24802 4477 23276 46598;46599 37546;37547 37547 2 9606 Homo sapiens 0.005394409271502809 SISSPSVSSETMDKPVDLSTR Oxidation (M) 2238.0686 0.068556435 3613 P49792;A0A8V8TLN4;A0A8V8TLA0;A0A8V8TL79;A0A8V8TMX6 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 1 1 6 0 1 46.654 46.737 3 1.1976E-07 12500 20230619_1886_Aki_TMTPro18x_K_F6 100.45 93.09 13258 11673 14128 14600 15904 20092 17342 16324 17834 20610 17501 14321 19094 12121 14879 16765 15705 17547 12272 10709 14315 14573 16432 19807 17415 17045 18151 20405 18017 14751 19206 12850 15261 16809 15031 16651 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32178000 24803 3613 23277 46600 37548 37548 2296 1 9606 Homo sapiens -0.0009551006601213885 SISSPSVSSETMDKPVDLSTR Unmodified 2222.0736 0.073641813 3613 P49792;A0A8V8TLN4;A0A8V8TLA0;A0A8V8TL79;A0A8V8TMX6 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 1 6 0 1 49.79 49.866 3 4.119E-45 13845 20230619_1886_Aki_TMTPro18x_K_F6 252.55 233.61 54369 39895 59340 66138 49956 68575 67028 65066 70092 74830 66684 59819 84069 65690 64914 76425 78866 80699 50279 36745 59790 64622 53171 69006 66696 66979 71150 74654 69284 61635 84311 68194 67177 76831 75337 76596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73511000 24804 3613 23277 46601 37549 37549 1 9606 Homo sapiens 0.011487937966194295 SISTSLPVLDLIDAIAPNAVR Unmodified 2164.2103 0.21033371 3894 Q14651 PLS1 Plastin-1 yes yes 0 0 0 3 0 1 67.718 67.758 3 7.4369E-08 21648 20230619_1882_Aki_TMTPro18x_K_F3 99.092 87.401 1054.4 1559 2247.4 998.42 759.15 2385.7 1872.1 2743.4 1390.2 1631.6 2098.4 921.61 864.63 2074.4 2519 1777.5 1901.6 806.84 989.01 1421 2156.1 1077.9 943.52 2312.2 1813.1 2742.3 1469.4 1686.3 2060.8 1013.4 1008.7 2078.9 2494 1740.2 1817.9 780.64 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1940200 24805 3894 23278 46602 37550 37550 1 9606 Homo sapiens 0.17479695809333862 SITSNNDDEDLTPEQK Unmodified 1804.7963 0.79628098 194 H3BPJ7;B3KVA4;A0A024R2C0;P15884-15;P15884-7;P15884-5;P15884-10;P15884-14;P15884-12;P15884;P15884-16;P15884-8;P15884-6;P15884-9 TCF4 Transcription factor 4 yes no 0 0 0 1 0 1 45.732 45.732 3 5.8156000000000005E-27 12603 20230619_1880_Aki_TMTPro18x_K_F1 194.23 183.5 25108 19240 25956 24772 21914 26557 24888 22406 22933 32553 36663 32529 36161 29620 28530 42099 39353 36739 23214 17665 26230 24587 23168 26620 24882 23458 24052 32341 36912 32958 36556 31307 29818 41762 37530 34961 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27283000 24806 194 23279 46603 37551 37551 1 9606 Homo sapiens -0.07392531025038807 SITVFFK Unmodified 840.47454 0.47454032 90 B4DKS0;A0A024R0H1;P53985;B4E106;B2R6A5;Q5T8R3;Q5T8R5;P53985-2;Q5T8R4 SLC16A1 Monocarboxylate transporter 1 yes no 0 0 0 4.67 0.471 1 2 61.109 61.136 2 0.0081964 18386 20230619_1885_Aki_TMTPro18x_K_F5 107.32 48.74 192780 149780 158790 170270 154370 167180 177360 177980 215490 232860 196320 210950 278360 208920 161030 334290 304360 340480 177940 137340 164120 170300 161420 169610 178680 182530 216870 231720 205870 215250 275910 222400 174690 333640 290080 323190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125080000 24807 90 23280 46604;46605;46606 37552;37553 37553 2 9606 Homo sapiens 0.04792202845430893 SITVLVEGENTR Unmodified 1316.6936 0.69359423 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;P33993-2;C9J8M6 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 3.5 0.5 1 1 50.94 50.991 2 5.2896E-05 14453 20230619_1883_Aki_TMTPro18x_K_F4 129.82 99.634 220730 164330 196440 201170 180130 210100 207660 204140 230230 268730 247760 266340 253140 217280 249630 269600 270360 264450 203800 150810 201360 200290 189290 211640 208550 210700 234200 267960 253780 268690 258040 228510 255150 269750 258440 251250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 366930000 24808 1091 23281 46607;46608 37554;37555 37555 2 9606 Homo sapiens 0.0479151755548628 SITYSLENK Unmodified 1053.5342 0.53424004 1731 A0A804HJA4;J3KN16;Q5VYK3;B3KXF2 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 7 0 1 49.544 49.628 2 6.1898E-06 13435 20230619_1887_Aki_TMTPro18x_K_F7 181.55 124.5 62585 48762 55389 61853 66328 81321 68774 59570 76564 77216 80869 77566 89541 68208 75782 92018 89820 90721 57799 44759 57081 61614 68182 80234 69420 62853 77757 77131 83118 78445 90412 71965 78167 91961 85809 86178 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24605000 24809 1731 23282 46609 37556 37556 1 9606 Homo sapiens 0.009614289981300317 SIVDNWPENHVK Unmodified 1436.7048 0.70482762 1317 A0A1W2PPH1;A0A1W2PQH3;P23368;A0A1W2PR68;A0A1W2PQT3;A0A1W2PQY8;A0A1W2PQ37;A0A1W2PQF8;P23368-2 ME2 NAD-dependent malic enzyme, mitochondrial yes no 0 0 0 6 0 1 47.8 47.88 3 0.0016846 12963 20230619_1886_Aki_TMTPro18x_K_F6 80.96 59.73 181260 145590 178890 209410 187480 219360 206030 205940 229230 257110 243660 243100 273940 218920 217980 282890 266510 249500 167570 133810 182250 206260 194660 220680 207410 212690 233000 256640 250590 246630 275900 230030 225680 281200 254410 237390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123090000 24810 1317 23283 46610 37557 37557 1 9606 Homo sapiens 0.0039433964957424905 SIVEEIEDLVAR Unmodified 1371.7246 0.72456001 1878 B2RE46;A0A994J5J1;P04844-2;P04844;Q5JYR4;Q5JYR7 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 0 0 4 0.816 1 1 1 66.126 66.153 2;3 3.7899E-18 21000 20230619_1882_Aki_TMTPro18x_K_F3 162.68 116.09 7584.9 7427.9 6968.8 9670.2 6577 7263.7 9378.2 9270.3 8743.2 8506.3 9474.3 9358.3 9930.3 8136.6 10717 10208 10187 12462 7017.5 6814.5 7142.5 9547.7 6934.7 7573.2 9273.7 9316.7 8969.3 8659.9 9710.2 9425.3 10155 8548.3 10852 10352 9767.5 11805 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7104000 24811 1878 23284 46611;46612;46613 37558;37559 37558 2 9606 Homo sapiens 0.05356670869673508 SIVGEIVR Unmodified 871.51272 0.51271674 2356 B4E0B7;B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00;A0PJ76 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 6.5 0.5 1 1 48.998 49.08 2 0.014429 13140 20230619_1887_Aki_TMTPro18x_K_F7 93.992 49.544 155260 127970 137510 146230 128990 157660 147260 141920 175950 163700 151000 136990 167690 132110 136170 167750 170470 147190 143440 117320 141100 146350 135360 158200 148310 146670 176660 163520 156710 140170 169090 138370 141080 166770 162610 140100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 306980000 24812 2356 23285 46614;46615 37560 37560 1 9606 Homo sapiens 0.071820887600893 SIVIRPLEPQPAPHLAR Unmodified 1893.0949 0.094850444 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;K7EP67 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 1 4 0.816 1 1 1 45.634 45.699 4 3.6549E-09 11994 20230619_1883_Aki_TMTPro18x_K_F4 137.73 105.88 100220 81946 84318 91764 100470 111340 105330 102150 113450 108200 116540 120110 112910 96720 105240 121540 132140 123780 92547 75114 87269 92139 103260 110910 106160 105160 115240 109390 119300 120610 115020 101840 108720 121810 126120 117580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 631860000 24813 2436 23286 46616;46617;46618 37561 37561 1 9606 Homo sapiens 0.1840268125959028 SIVTDLVSQMDPHGR Unmodified 1653.8145 0.81445442 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YFD1;A0A2R8YD53;A0A2R8YGE5;A0A2R8Y4Q3;A0A2R8Y4G4 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 8 0 1 59.945 59.982 3 3.0824E-43 17787 20230619_1888_Aki_TMTPro18x_K_F8 230.57 219.53 32051 31123 36371 36499 32525 39497 35288 36001 46071 35357 35460 37027 37219 34051 40802 38014 32806 39754 29705 28523 36533 36465 34196 39628 35762 37008 45873 35846 36981 37411 38111 35424 40973 38247 31514 37714 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56946000 24814 2865 23287 46619 37562 37562 1 9606 Homo sapiens 0.013699772066274818 SIWAFGPDATGPNILVDDTLPSEVDK Unmodified 2756.3545 0.35449135 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;Q6IBM8;A8KAP3;Q15029-3;B3KWY2;K7EP67;K7EJ74 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 5.67 0.471 1 2 65.241 65.285 3;4 8.2649E-14 20292 20230619_1885_Aki_TMTPro18x_K_F5 133.1 122 14677 14843 15409 16305 16062 17172 17444 17299 17082 17911 19459 15329 17696 16342 18541 18092 20551 18719 13597 13593 15608 16364 16657 17309 17503 17680 17520 17989 19753 15731 18167 16915 18946 18191 19631 17780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123480000 24815 2436 23288 46620;46621;46622 37563;37564 37563 2 9606 Homo sapiens 0.04656827988083023 SIYDDISSPGLGSTPLTSR Unmodified 1964.9691 0.96910039 2034 A8K3Z5;Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4;A8K0N6 NUP35 Nucleoporin NUP53 yes no 0 0 0 6.5 0.5 1 1 59.763 59.817 3 4.4714E-11 17729 20230619_1887_Aki_TMTPro18x_K_F7 142.94 125.82 50866 47753 53206 51274 54079 61111 57725 58766 71392 64067 63277 63892 68562 59374 66531 74413 73611 72300 47096 43734 53857 51652 56223 61010 58421 60325 71631 64480 65547 64735 69731 62186 68122 74396 70353 68698 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115710000 24816 2034 23289 46623;46624 37565;37566 37566 2 9606 Homo sapiens 0.02521460102184392 SIYEGDESFR Unmodified 1201.5251 0.52513192 2839 D6R9C7;D6RCM5;D6RDH6;K4DI92;Q6NW29 RWDD4 RWD domain-containing protein 4 yes no 0 0 0 1.5 0.5 1 1 45.513 45.554 2 2.1679E-14 12353 20230619_1881_Aki_TMTPro18x_K_F2 240.46 191.9 94905 74256 81412 97257 89916 103520 96422 96087 105610 113160 119730 117450 120780 108280 113400 128540 130770 123710 87628 68182 84053 96378 92968 104020 97144 99145 107670 113570 122220 118750 122930 113030 116480 128540 124910 117570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132250000 24817 2839 23290 46625;46626 37567 37567 1 9606 Homo sapiens -0.06756964358191908 SIYGEKFEDENFILK Unmodified 1830.904 0.90398093 2036;3735 P62937;A8K486;V9HWF5;B2RE56;Q71V99;F8WE65;C9J5S7;P62937-2;A0A7I2V4V1 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase no no 0 0 1 4.5 1.71 1 1 1 1 1 1 60.631 60.664 3 1.9452E-19 18023 20230619_1887_Aki_TMTPro18x_K_F7 215.79 180.13 3242300 3671600 3545200 3178600 2976700 2492600 3872300 3379600 1786200 4073000 3012400 1524500 2001200 1033200 4836200 960930 933210 335560 3007600 3355000 3564800 3247400 3147800 2599000 3790200 3410200 1996600 3994300 2985700 1645000 2198900 1082900 4630900 945100 926480 327530 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 8479199999.999999 24818 2036;3735 23291 46627;46628;46629;46630;46631;46632 37568;37569;37570;37571;37572;37573 37572 6 9606 Homo sapiens 0.021765103670077224 SIYSLILGQDNAADQSR Unmodified 1849.917 0.91700524 1765 A0A8I5KU67;A0A8I5KS41;Q9P0I2-2;Q9P0I2 EMC3 ER membrane protein complex subunit 3 yes no 0 0 0 8 0 1 62.66 62.685 3 3.3548E-06 18945 20230619_1888_Aki_TMTPro18x_K_F8 76.586 63.183 51176 40897 49492 52196 46155 56005 55822 52471 64915 70100 57282 63192 72043 58285 67145 76752 64341 68960 47302 37538 50391 51832 48516 56252 55999 54325 65383 69692 59829 64277 72805 61272 68264 76370 61621 65564 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62236000 24819 1765 23292 46633 37574 37574 1 9606 Homo sapiens 0.026043414791502073 SIYSQIQEQR Unmodified 1250.6255 0.62551466 801 A0A087WT20;Q9NV06 DCAF13 DDB1- and CUL4-associated factor 13 yes no 0 0 0 6 0 1 43.66 43.752 2 0.0042183 11120 20230619_1886_Aki_TMTPro18x_K_F6 107.55 90.614 98061 69343 99331 102910 98636 108200 97473 103240 134650 126890 119460 119650 135610 109100 108430 135550 140880 137670 90607 63787 100800 101200 102540 108870 99531 106430 134510 126790 123960 121430 136600 114340 112680 135820 134450 130750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93945000 24820 801 23293 46634 37575 37575 1 9606 Homo sapiens 0.010226926954601367 SIYYITGESK Unmodified 1159.5761 0.57610486 751;4018 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 0 0 0 6.29 2.25 1 1 3 2 52.648 52.711 2;3 2.0058E-13 14726 20230619_1887_Aki_TMTPro18x_K_F7 219.97 170.55 1159700 902830 980710 1054200 975680 1158400 1103300 1067100 1231100 1385100 1359500 1285000 1336200 1197800 1135900 1834400 1089500 1337200 1070600 828040 1011600 1053700 1018500 1161400 1109100 1105000 1252900 1379700 1387000 1307400 1355100 1271100 1160200 1803200 1044600 1274500 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 19402000000 24821 751;4018 23294 46635;46636;46637;46638;46639;46640;46641 37576;37577;37578;37579;37580;37581 37578 6 9606 Homo sapiens 0.0026998468665624387 SKAEAESLYQSK Unmodified 1339.662 0.66195975 2778 H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2;H6VRF9 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 1 7 0.816 1 1 1 45.766 45.836 3 1.3809E-05 12059 20230619_1886_Aki_TMTPro18x_K_F6 120.29 73.098 + 44918 44570 94547 94937 1889000 109590 379300 83066 178810 35553 54634 58249 59505 310550 68879 34872 91298 58747 41969 41163 116150 91813 1763400 114620 462360 86348 190560 39908 62394 66612 62881 296270 70900 41154 86911 55665 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 352050000 24822 2778 23295 46642;46643;46644 37582;37583 37583 2 9606 Homo sapiens 0.005715248015121688 SKAELMEISEDK Oxidation (M) 1394.6599 0.65991084 2662 B5BUB5;P05455;E7ERC4;E9PGX9;E9PFL9 SSB Lupus La protein yes no 0 1 1 3.75 0.829 2 1 1 47.598 47.667 3 0.036576 13033 20230619_1882_Aki_TMTPro18x_K_F3 58.752 38.371 275530 212730 242450 282710 314100 301350 307810 306740 332860 344720 398080 342950 359150 303050 335680 369080 346680 338570 254430 195370 250310 279940 320130 303530 311520 314000 340300 346250 403270 347140 366600 317380 342550 368060 331530 321930 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 509160000 24823 2662 23296 46645;46646;46647;46648 37584;37585 37584 1610 2 9606 Homo sapiens -0.021632719985746007 SKAELMEISEDK Unmodified 1378.665 0.66499622 2662 B5BUB5;P05455;E7ERC4;E9PGX9;E9PFL9 SSB Lupus La protein yes no 0 0 1 4 1.41 1 1 1 1 1 51.613 51.671 3 0.00013381 14720 20230619_1883_Aki_TMTPro18x_K_F4 111.3 83.002 634960 531590 618250 643500 655950 740410 731180 714560 771040 845660 815920 804070 904840 693160 795470 868050 812810 715550 587090 487580 630220 642030 680450 740770 734170 735200 785640 846180 838850 814390 914860 728060 812130 860890 776850 681600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1602899999.9999998 24824 2662 23296 46649;46650;46651;46652;46653 37586 37586 1 9606 Homo sapiens -0.009189681359657698 SKDTYLLYEGR Unmodified 1343.6721 0.67213051 1732 Q8N9Q7;A0A804HJB7;Q9BSH4 CCDC44;TACO1 Translational activator of cytochrome c oxidase 1 yes no 0 0 1 7 0 1 46.473 46.561 3 0.0048681 12003 20230619_1887_Aki_TMTPro18x_K_F7 70.089 48.532 241690 177630 239210 230900 249030 259290 283760 272120 267350 264490 295780 206570 220290 174010 276600 198290 220630 170080 223320 163130 243310 229240 258590 260350 283630 276870 274320 265880 298360 211450 229700 181930 276740 197590 211290 162020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265420000 24825 1732 23297 46654 37587 37587 1 9606 Homo sapiens 0.014041325267498905 SKEESSGTPAHQMNLR Oxidation (M) 1786.8268 0.82681002 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 1 1 5 0 1 28.963 29.037 4 4.9347E-05 5338 20230619_1885_Aki_TMTPro18x_K_F5 102.58 95.466 8385.6 4735.8 10298 11404 12371 13645 10635 12159 7924.1 11039 11742 10650 10435 7042.1 11192 7673.5 5941.5 7340.8 7753.6 4393.9 10339 10982 12626 13579 10753 12490 8394.2 11192 11807 10703 10704 7424.6 11059 7696 5745.2 6970.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19599000 24826 385 23298 46655 37588 37588 242 1 9606 Homo sapiens -0.03513031120996857 SKEESSGTPAHQMNLR Unmodified 1770.8319 0.8318954 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 1 6 0 1 33.107 33.148 4 5.2636E-14 6923 20230619_1886_Aki_TMTPro18x_K_F6 171.71 156.51 16035 12200 17639 18152 19030 20981 19592 19950 16024 22060 19382 19014 19032 11234 20293 18024 14303 15068 14833 11220 17809 17873 19654 20971 19622 20504 16695 22066 19719 19167 19450 12225 20271 17846 13748 14340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46076000 24827 385 23298 46656 37589 37589 1 9606 Homo sapiens -0.022687272583652884 SKEPDGDRVVYTGTYDTEGVTPTK Unmodified 2614.2399 0.23985552 2718 B8ZZB8;Q96F85-2;Q96F85 CNRIP1 CB1 cannabinoid receptor-interacting protein 1 yes no 0 0 2 4.75 0.829 2 1 1 45.696 45.759 4;5 6.8388E-05 12064 20230619_1886_Aki_TMTPro18x_K_F6 77.576 64.121 82844 74475 78053 73838 65514 72691 73122 74814 79297 89826 100030 99767 96386 83882 109490 102840 105280 105780 76614 68171 79463 74679 69263 73694 73543 76693 81291 90246 101540 100310 99108 88042 110840 103230 100770 100440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 144240000 24828 2718 23299 46657;46658;46659;46660 37590;37591;37592 37592 3 9606 Homo sapiens -0.0026948149388772435 SKFDEMAK Unmodified 954.44807 0.44806757 3240 O15347;E9PES6;E7ES08;E7EQU1;Q7Z684;Q16466 HMGB3;DKFZp779G118 High mobility group protein B3 yes no 0 0 1 6.5 0.5 1 1 44.558 44.644 3 0.012104 11097 20230619_1887_Aki_TMTPro18x_K_F7 78.655 8.5552 1443100 1187900 1459500 1490600 1840400 1992200 1928800 1779400 2087500 1755400 2044700 1948600 2010600 1645100 1894500 1797000 2220100 1702600 1334600 1090000 1487400 1487000 1883300 1971600 1943900 1832000 2114700 1782000 2097800 1959500 2047400 1715000 1945700 1798800 2117400 1620000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6712799999.999999 24829 3240 23300 46661;46662 37593 37593 1 9606 Homo sapiens -0.030978541082163247 SKFDNLYGCR Unmodified 1258.5765 0.57645598 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 1 2.5 0.5 1 1 44.962 45.04 3 0.0006252 12133 20230619_1881_Aki_TMTPro18x_K_F2 91.961 76.76 1144200 969520 1136300 1054200 1065800 1104800 1109400 1068100 1037800 1243900 1184600 1032400 1226300 909320 1274200 1296800 1137400 930920 1058200 888330 1153200 1059100 1112800 1113200 1114500 1098500 1068400 1240800 1209700 1054200 1251300 962760 1287300 1276600 1088100 888820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2164800000 24830 1439 23301 46663;46664 37594;37595 37594 2 9606 Homo sapiens -0.04248918865118867 SKFEDMAK Unmodified 954.44807 0.44806757 4068;3509 Q5U071;D6R9A6;P26583 HMGB2 High mobility group protein B2 no no 0 0 1 7.5 0.5 1 1 44.609 44.66 3;4 0.021469 11205 20230619_1887_Aki_TMTPro18x_K_F7 78.934 7.7112 279850 223030 261270 253230 243750 262100 276880 267770 311110 253440 301560 259110 270920 230570 298220 287000 313860 236730 258590 204480 266630 253510 255470 264580 278360 272830 314330 257170 308300 262090 278800 241670 303550 284780 299620 225670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 363290000 24831 4068;3509 23302 46665;46666 37596;37597 37596 2 9606 Homo sapiens -0.030978541082163247 SKIEDYFPEFAR Unmodified 1500.7249 0.72489436 1073 A0A0S2Z3H8;A0A7I2V5R6;Q5JWF2;Q5JWF2-2;P63092-4;P63092-3;P63092;P63092-2;Q5JWE9;A0A0S2Z3S5;Q14455;A0A590UJQ9;A0A590UK28;Q5FWY2;A0A804HIH4;B0AZR9;A0A0A0MR13;A0A590UJF0;A0A590UJS2;A0A590UJY2;O60726 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short yes no 0 0 1 7.5 0.5 1 1 59.298 59.344 3 2.9961E-06 17506 20230619_1888_Aki_TMTPro18x_K_F8 143.94 123.89 539290 526410 583770 633450 531070 577890 648370 614190 635970 767810 650940 661350 803610 651580 645950 830640 676850 723130 499610 482560 588850 630310 558540 589580 646670 629210 650180 764250 673900 675900 807580 682030 662370 825310 647630 687800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 490130000 24832 1073 23303 46667;46668 37598;37599 37599 2 9606 Homo sapiens -0.00543909410453125 SKLEDIANAALAASAVTQVAK Unmodified 2070.1321 0.13208339 1657 Q8WVM8;A0A7I2V4B8;A0A7I2V5Z4;A0A7I2V3B4;A0A7I2V5I2;Q53GW1;Q8WVM8-2;Q8WVM8-3;A0A7I2V590;A0A7I2V320;A0A7I2V4R0;B7Z738;G3V2M8;A0A7I2V362;H0YIZ7;A0A7I2V3C9;A0A7I2YQR2;A0A7I2V534;A0A7I2V5H5;G3V5E2;H0YJY1;A0A7I2V321;A0A7I2V5R9;J3KNG4;A0A7I2YQQ1;A0A7I2V5L2 SCFD1 Sec1 family domain-containing protein 1 yes no 0 0 1 3 0 1 63.301 63.332 3 0.063921 19802 20230619_1882_Aki_TMTPro18x_K_F3 48.656 29.823 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24833 1657 23304 46669 37600 37600 1 9606 Homo sapiens 0.13982263224033886 SKLESELANFGPR Unmodified 1446.7467 0.74669243 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 1 8 0 1 54.467 54.534 3 0.0075686 15505 20230619_1888_Aki_TMTPro18x_K_F8 69.878 54.339 373950 343910 410520 408910 337150 406700 418960 376990 435160 474840 458740 419960 470110 362400 437300 440750 406780 381970 346330 315280 412920 407680 358310 410760 418290 389980 443570 472920 469830 426860 477510 380010 443580 438430 389330 363510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 480430000 24834 1432 23305 46670 37601 37601 1 9606 Homo sapiens 0.04118895338092443 SKLPNTVLGK Unmodified 1055.6339 0.63389451 2224 Q9H4M9;B2R5U3;A0A024R571;B4DMV9;B4DR44;B4DTR4 EHD1 EH domain-containing protein 1 yes no 0 0 1 4 0 1 47.16 47.202 3 0.023567 12703 20230619_1883_Aki_TMTPro18x_K_F4 62.14 36.703 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24835 2224 23306 46671 37602 37602 1 9606 Homo sapiens 0.10830291402749026 SKPGAAMVEMADGYAVDR 2 Oxidation (M) 1898.8502 0.85024758 1455;1520 Q6NTA2;A0A384N6C7;P14866;M0QXS5;P14866-2;M0QYT0;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 2 1 4.5 0.5 1 1 41.991 42.055 3 1.6838E-06 10351 20230619_1883_Aki_TMTPro18x_K_F4 104.84 13.248 124230 103300 104910 157520 157330 145130 153530 144930 140200 154390 194550 164020 170330 150540 158770 184300 169570 176560 114730 94993 109260 154310 158920 147710 154590 148410 145760 155780 195790 165800 174070 157470 162400 184160 162190 167750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136600000 24836 1455;1520 23307 46672;46673 37603;37604 37604 962;963 2 9606 Homo sapiens -0.06322353398672931 SKPGAAMVEMADGYAVDR Oxidation (M) 1882.8553 0.85533296 1455;1520 Q6NTA2;A0A384N6C7;P14866;M0QXS5;P14866-2;M0QYT0;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 1 1 5 0.707 1 2 1 46.372 46.442 3 7.6605E-07 11733 20230619_1885_Aki_TMTPro18x_K_F5 116.69 11.689 263080 219600 225820 318070 263730 296790 297040 290010 290750 342830 375530 349600 377310 316870 355470 362490 361870 398420 243010 201810 233650 312590 271880 301480 297400 298270 300130 343740 381250 353580 383890 330450 362250 365540 346420 377910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 881630000 24837 1455;1520 23307 46674;46675;46676;46677 37605;37606 37605 962;963 2 9606 Homo sapiens -0.050780495360641 SKPGAAMVEMADGYAVDR Unmodified 1866.8604 0.86041834 1455;1520 Q6NTA2;A0A384N6C7;P14866;M0QXS5;P14866-2;M0QYT0;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 0 1 6.33 0.471 2 1 52.702 52.777 3;4 1.0156E-13 14819 20230619_1887_Aki_TMTPro18x_K_F7 156.92 149.56 896350 727000 770930 869800 759300 1032500 892490 891650 981880 1104000 1141600 1192700 1392500 991370 1076300 1377100 1246300 1380900 827830 666830 794250 868690 795080 1028000 895150 926310 1002400 1106900 1174900 1200200 1396900 1050500 1111100 1376800 1191700 1311000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2672600000 24838 1455;1520 23307 46678;46679;46680 37607;37608 37608 2 9606 Homo sapiens -0.03833745673455269 SKPHSEAGTAFIQTQQLHAAMADTFLEHMCR Acetyl (Protein N-term) 3554.6493 0.64932671 3451;370 A0A024R5Z9;P14618-2;B4DRT3;H3BTN5;A0A8V8TMM5;Q504U3;A0A024R609;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;H3BQZ3;H3BN34;V9HWB8;P14618;B4DNK4 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 1 0 1 1.5 0.5 1 1 57.938 57.945 5 6.0364E-22 17822 20230619_1881_Aki_TMTPro18x_K_F2 46.15 35.635 25683 16859 26398 32730 21952 29847 27272 25285 27079 30674 28214 20704 27381 22357 25992 31966 25978 32707 23725 15571 26734 31671 23332 30258 27191 26307 27663 30410 28810 21561 27898 23535 26491 31987 24902 31033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 872030000 24839 370;3451 23308 46681;46682 37609 37609 1 9606 Homo sapiens -0.025811981985498278 SKPHSEAGTAFIQTQQLHAAMADTFLEHMCR Acetyl (Protein N-term);Oxidation (M) 3570.6442 0.64424133 3451;370 A0A024R5Z9;P14618-2;B4DRT3;H3BTN5;A0A8V8TMM5;Q504U3;A0A024R609;H3BQ34;H3BUW1;H3BTJ2;H3BT25;H3BU13;H3BQZ3;H3BN34;V9HWB8;P14618;B4DNK4 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 1 1 1 7 0 1 53.478 53.545 5 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 314120000 24840 370;3451 23308 46683 0 9606 Homo sapiens -0.03825502061181396 SKPNLPSESR Unmodified 1113.5778 0.57783619 2085 A8K644;Q08170;Q59EF5 SFRS4;SRSF4 Serine/arginine-rich splicing factor 4 yes no 0 0 1 7.5 0.5 1 1 36.326 36.353 3 0.041077 7850 20230619_1887_Aki_TMTPro18x_K_F7 55.578 41.421 70950 52991 71824 74319 83634 99923 93289 93573 112290 87026 104640 101640 101480 88004 81693 81358 111850 104480 65576 48702 73105 73618 86271 98901 94069 95837 112900 88798 107530 102040 102770 90899 85073 83173 106670 99020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 231150000 24841 2085 23309 46684;46685 37610 37610 1 9606 Homo sapiens 0.02559038495292043 SKSEEAHAEDSVMDHHFR Unmodified 2110.9127 0.91266492 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 1 2.5 0.5 1 1 36.424 36.48 6 7.4509E-07 8181 20230619_1882_Aki_TMTPro18x_K_F3 111.22 107.56 44640 40717 51601 62876 64688 65669 87392 94842 37162 50097 53857 63553 52506 37288 70600 39003 63533 65747 41360 37437 52131 61706 66548 66823 85266 93645 41413 53294 54565 62980 54424 39490 70903 40759 60871 62156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70913000 24842 4246 23310 46686;46687 37611 37611 1 9606 Homo sapiens -0.09835491006151642 SKSPDPDPNLSHDR Unmodified 1563.7277 0.7277479 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;H0Y9Y3;Q9UMS6;Q9UMS6-3 SYNPO2 Synaptopodin-2 yes no 0 0 1 3.5 0.5 1 1 33.47 33.529 4 0.0012032 6904 20230619_1883_Aki_TMTPro18x_K_F4 89.541 61.799 58504 47592 65617 56540 75574 74982 77421 68202 71146 79301 81579 57647 73526 54558 82588 61728 61043 45578 54149 43649 66156 56634 77639 74297 77759 70429 73296 78881 82728 59450 75630 56792 82512 61099 58507 43518 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31535000 24843 4686 23311 46688;46689 37612;37613 37613 2 9606 Homo sapiens -0.031566860235898275 SKTEADMEEYIWENSSSER Unmodified 2289.9696 0.96957067 3761 P82673 MRPS35 28S ribosomal protein S35, mitochondrial yes yes 0 0 1 2 0 1 55.096 55.117 3 0.0092716 16643 20230619_1881_Aki_TMTPro18x_K_F2 63.184 54.583 25251 19947 19944 20245 21498 25827 24276 23208 24975 29663 24872 25735 28189 21709 27177 28051 26585 28438 23303 18271 20730 20506 22309 25638 24336 24056 25436 29505 25681 26155 28600 22878 27626 28106 25455 27000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42120000 24844 3761 23312 46690 37614 37614 1 9606 Homo sapiens -0.12381533030884384 SKTPEIYLAYR Unmodified 1339.7136 0.71360139 4016;645 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 no no 0 0 1 2.5 0.5 1 1 48.485 48.557 3 0.0046919 13783 20230619_1881_Aki_TMTPro18x_K_F2 72.29 53.019 392980 370110 420200 412640 486420 487050 498570 455460 484690 427940 464440 314820 309610 235060 507410 242080 244130 200920 363930 339070 425510 414370 499700 486380 501510 466770 493490 430550 470070 322220 329750 245650 496490 241800 235830 191430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 236570000 24845 4016;645 23313 46691;46692 37615;37616 37615 2 9606 Homo sapiens 0.057333132860549085 SKVDEAVAVLQAHHAK Unmodified 1701.9162 0.91621738 1667 Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;H0Y5F5;H0YEU6;Q59GZ7;A0A7I2V4V6;H0Y6X6;H0YER0 PABPC4 Polyadenylate-binding protein 4;Polyadenylate-binding protein yes no 0 0 1 1.5 0.5 1 1 48.862 48.894 5 7.5507E-08 14003 20230619_1881_Aki_TMTPro18x_K_F2 130.06 102.56 46214 35943 45576 46462 43468 47670 54815 50139 59986 67866 59485 57226 60685 48251 58727 61212 61025 57026 42714 32999 46330 46080 45617 48171 54762 51528 60850 67295 61100 58252 61781 50775 59891 61067 58339 54223 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2358000000 24846 1667 23314 46693;46694 37617 37617 1 9606 Homo sapiens 0.09333591620702464 SKVDEAVAVLQAHQAK Unmodified 1692.9159 0.91588303 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;Q3ZCS4;Q9H361;Q5VX58;Q2VIP3;H0YAS6;H0YB75;H0YAS7;H0YC10 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 yes no 0 0 1 1.5 0.5 1 1 52.426 52.445 5 1.1529E-10 15503 20230619_1881_Aki_TMTPro18x_K_F2 149.3 121.44 73033 69447 76219 79389 67718 79420 80660 85192 87470 105110 91171 77327 102110 74430 81923 94716 86349 70636 67624 63635 77059 79391 71382 80450 80829 87133 88989 104270 93736 79686 102810 77994 83969 93485 82466 67403 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 424960000 24847 566 23315 46695;46696 37618 37618 1 9606 Homo sapiens 0.09714171900850488 SKVEDPEINSIQDIK Unmodified 1713.8785 0.87849447 1532 A0A3B3IUD7;Q14690 PDCD11 Protein RRP5 homolog yes no 0 0 1 5 0.816 1 1 1 50.923 50.984 3 1.5779E-07 14418 20230619_1883_Aki_TMTPro18x_K_F4 127.83 99.202 221030 183660 218490 240830 236700 277900 255560 247160 269640 283520 294210 294570 319260 260100 307410 339120 297650 329580 204380 168600 222610 238930 245040 277430 257050 255620 275010 284920 301860 297470 324360 273650 312450 338880 285100 313020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 332050000 24848 1532 23316 46697;46698;46699 37619;37620;37621 37619 3 9606 Homo sapiens 0.05011035844586331 SLAAEWGK Unmodified 860.43922 0.43921744 569 A0A024R9D7;Q16698-2;Q16698 DECR1 2,4-dienoyl-CoA reductase, mitochondrial yes no 0 0 0 7.5 0.5 2 2 51.402 51.479 2;3 0.00081887 14220 20230619_1887_Aki_TMTPro18x_K_F7 155.38 72.013 281430 234490 269050 283940 330540 356760 371320 365680 409010 303500 307350 308360 353770 288910 322160 317000 342060 325170 260170 215090 275420 283700 339500 355420 373020 371230 410230 310390 322210 312240 358060 300230 329200 318620 326970 308820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 315930000 24849 569 23317 46700;46701;46702;46703 37622;37623;37624 37622 3 9606 Homo sapiens 0.0034154031761772785 SLAALSQIAYQR Unmodified 1319.7197 0.7197494 3798 Q05682-5;E9PGZ1;E7EX44;Q05682-3;Q6PJM5;Q6P707;Q05DR4 CALD1 Caldesmon yes no 0 0 0 4.67 0.471 1 2 57.496 57.536 2;3 4.9061E-07 17316 20230619_1883_Aki_TMTPro18x_K_F4 151.79 130.42 105620 92042 93041 112610 126560 145500 119080 121830 139710 118090 128910 107500 123560 100600 129250 124810 121360 122060 97607 84420 96194 112420 128710 144070 121120 125960 140680 119290 132410 109490 126500 105320 130870 124900 116200 115960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 319040000 24850 3798 23318 46704;46705;46706 37625;37626 37625 2 9606 Homo sapiens 0.07267831517606282 SLACQPISFSGFGAEDDDLGGLGLGP Unmodified 2579.185 0.18498318 836 A0A8V8TPA1;B4DP28;A0A8V8TMJ0;A0A8V8TMJ5;H7C1B3;C9JLE1;A0A8V8TPA6;A0A087WWF6;P49005;C9JHC7 POLD2 DNA polymerase delta subunit 2 yes no 0 0 0 5 0 1 66.999 67.041 3 0.05116 20994 20230619_1885_Aki_TMTPro18x_K_F5 40.142 31.99 5199.4 4320.9 3703.1 3935.2 4604.5 3971.2 6673.8 5549.2 4689.8 5350.8 5693.3 5255.1 5610.7 5391 6148.2 7239.4 6896.2 5015.1 4796.8 3953.7 3902 4012.2 4754.9 4055.2 6543.2 5556.4 4931.4 5412.1 5791.5 5350.8 5759.7 5647.6 6289.2 7118.6 6578 4793.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10138000 24851 836 23319 46707 37627 37627 1 9606 Homo sapiens -0.041441915661380335 SLADELALVDVLEDK Unmodified 1628.8509 0.85088273 1577 P07195;Q5U077;A0A5F9ZHM4;A0A3B3IS95;A8MW50;C9J7H8;F5H793 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 3.22 1.31 1 2 2 2 2 65.666 65.687 2;3 3.2101E-14 20828 20230619_1882_Aki_TMTPro18x_K_F3 191.26 158.73 62370 50890 55684 58226 47139 95678 58827 55353 93313 58081 58372 64074 68883 58536 62471 75356 73045 80748 57619 46657 57062 58658 50390 92869 59670 59409 91602 58868 62025 64602 69697 61462 64294 75712 69840 76609 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1461299999.9999998 24852 1577 23320 46708;46709;46710;46711;46712;46713;46714;46715;46716 37628;37629;37630;37631 37629 4 9606 Homo sapiens 0.06161132584315965 SLADFEK Unmodified 808.39668 0.39668393 3207 O00231;O00231-2;B4DTS5 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 4.5 0.5 1 1 51.101 51.155 2 0.007829 14258 20230619_1885_Aki_TMTPro18x_K_F5 122.13 25.061 731610 633600 647380 774990 772680 859800 781160 783810 953010 858010 902170 930420 948680 759800 844030 1039700 1028000 974740 676100 581140 667310 771970 793410 861290 792380 808060 959030 865550 930170 935720 961700 804240 871320 1036000 981410 926700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 405790000 24853 3207 23321 46717;46718 37632;37633 37633 2 9606 Homo sapiens -0.015178548106177914 SLADIAR Unmodified 744.413 0.41300269 1225 Q6IB71;A0A140VK43;P25788-2;P25788;G3V4X5 PSMA3 Proteasome subunit alpha type;Proteasome subunit alpha type-3 yes no 0 0 0 5 0.816 1 1 1 43.255 43.328 2 0.018192 10941 20230619_1886_Aki_TMTPro18x_K_F6 107.59 36.216 212690 161970 184570 200070 215470 248770 214810 221390 672300 171410 164490 162130 187610 140870 187670 193660 205620 170800 196370 148650 190400 199540 222520 247180 230170 226690 637020 176870 193470 164410 190920 148870 191840 192480 196320 162590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 279080000 24854 1225 23322 46719;46720;46721 37634;37635 37635 2 9606 Homo sapiens 0.03057271146144558 SLADLPNFTPFPDEWTVEDK Unmodified 2320.0899 0.089943804 4677;4649 Q9UKL0;Q9P2K3-4;E9PQE5;B4DV59;Q9P2K3-2;Q9P2K3;Q9P2K3-3 RCOR1;RCOR3 REST corepressor 1;REST corepressor 3 no no 0 0 0 4.5 0.5 1 1 65.158 65.184 3 9.466E-08 20244 20230619_1885_Aki_TMTPro18x_K_F5 102.37 92.309 24589 23053 26102 28795 24947 26194 26806 25191 22203 35904 37956 35705 38734 35382 31962 38305 34816 41629 22769 21143 26386 28573 26022 26671 26800 26104 23563 35682 38217 36249 39192 36660 32816 38615 33332 39479 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33748000 24855 4677;4649 23323 46722;46723 37636;37637 37637 2 9606 Homo sapiens -0.017297569750098774 SLAEACSDGDVNAVR Unmodified 1562.6995 0.69948424 4207 Q8IWZ3-6;Q8IWZ3-4;Q8IWZ3;E9PDP5;Q8TEF1;Q8IWZ3-2;Q8IWZ3-5;D6RHC4;Q8IWZ3-3 ANKHD1;FLJ00246 Ankyrin repeat and KH domain-containing protein 1 yes no 0 0 0 2 0 1 42.531 42.61 2 0.0022103 11021 20230619_1881_Aki_TMTPro18x_K_F2 83.397 70.82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24856 4207 23324 46724 37638 37638 1 9606 Homo sapiens -0.05935751995184546 SLAEDFAEQPIK Unmodified 1346.6718 0.67179615 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2;A0A024R3G0;J3KTF1;J3QL06 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 3.5 0.5 2 2 57.071 57.09 2;3 3.5767E-08 17085 20230619_1883_Aki_TMTPro18x_K_F4 205.83 184.36 145490 128730 137740 159360 157150 191400 182460 175750 197230 187910 183250 205390 222600 184670 205630 220650 221650 244650 134540 118070 141040 158800 162520 190700 182910 180960 199590 189820 190590 206980 225120 193140 210360 222450 212080 232030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1222400000 24857 874 23325 46725;46726;46727;46728 37639;37640 37640 2 9606 Homo sapiens 0.012327128069046012 SLAEGYFDAAGR Unmodified 1255.5833 0.5833155 277 Q6FHH6;Q53TN2;B2R602;A0A024R3Z5;O43813;E9PHS0;F8WDS9;B4DGM7 LANCL1 LanC-like protein 1 yes no 0 0 0 4.5 0.5 1 1 52.22 52.269 2 1.4627E-09 15042 20230619_1883_Aki_TMTPro18x_K_F4 185.96 144.51 271510 215060 258980 290420 241960 272270 297330 301960 286150 333450 372860 396340 383420 322090 368320 406450 438370 459650 250920 197530 264080 286840 254120 277330 296380 307340 295740 337010 379160 397010 390280 339220 378880 409930 418900 435930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 327970000 24858 277 23326 46729;46730 37641;37642 37641 2 9606 Homo sapiens -0.034252827129193975 SLAESELR Unmodified 903.46616 0.46616048 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;Q01433-5;Q01433-3;Q01433-4;A0A7P0Z4H6;A0A590UJX5;A0A590UK85;A0A7P0T999;E9PJF6;A0A7P0TB79;E9PIJ1 AMPD2 AMP deaminase 2 yes no 0 0 0 2.5 0.5 1 1 40.287 40.352 2 0.00080224 9966 20230619_1881_Aki_TMTPro18x_K_F2 155.75 80.443 299960 211020 269150 289780 373840 347650 345700 352220 427040 385680 491320 467480 435550 349830 403490 450840 519330 470770 276880 193940 277610 286890 378940 347360 352700 360350 432740 390470 498400 467070 444720 370140 417490 452410 495430 447100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 433320000 24859 1570 23327 46731;46732 37643 37643 1 9606 Homo sapiens 0.010566041381594005 SLAGQSGQGKPR Unmodified 1184.6262 0.62618337 3386 P04920;Q59GF1;P04920-3;Q99654;P04920-2;Q9UEY6;Q8TAG3;Q9UEY5;Q9UEY4;Q6PJY3 SLC4A2 Anion exchange protein 2;Anion exchange protein yes no 0 0 1 3 0 1 32.633 32.705 3 0.030119 6657 20230619_1882_Aki_TMTPro18x_K_F3 58.098 38.52 20665 10545 26294 26623 30023 33938 28309 29228 27315 25881 33120 37005 25341 27183 37017 14441 33461 25960 19106 9798.1 26301 25627 30826 33619 28628 30097 28101 26668 33419 36677 26694 27672 37109 15445 31998 24562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4910000 24860 3386 23328 46733 37644 37644 1 9606 Homo sapiens 0.041255321351854946 SLAKPETDK Unmodified 987.52368 0.52367535 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;Q6PJY7;E9PPR5;E9PNB5 NASP Nuclear autoantigenic sperm protein yes no 0 0 1 6.5 0.5 1 1 39.904 39.98 3 0.032297 9226 20230619_1887_Aki_TMTPro18x_K_F7 61.593 32.507 52912 28976 57293 57567 78125 107450 61059 77058 101820 58849 89187 146070 100950 110840 73797 77881 159890 200300 48859 26797 58171 56360 79288 104040 63840 80298 100760 63201 92952 142920 101650 113780 80291 85604 152430 188800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55799000 24861 3605 23329 46734;46735 37645 37645 1 9606 Homo sapiens 0.02941446343709231 SLAKPETDKEQDSEMEK Unmodified 1963.9045 0.90445122 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;Q6PJY7;E9PPR5;E9PNB5 NASP Nuclear autoantigenic sperm protein yes no 0 0 2 4 0.816 1 1 1 43.05 43.113 4 6.0773E-06 10848 20230619_1885_Aki_TMTPro18x_K_F5 101.78 87.473 360930 263280 323290 322330 420560 459840 353780 342270 406860 407380 470660 461090 425960 384420 401700 447710 451420 425110 333230 241650 332950 322400 427490 451890 362300 359500 414090 409960 477840 463090 435150 402220 411900 447550 431250 404110 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 274130000 24862 3605 23330 46736;46737;46738 37646;37647;37648 37648 3 9606 Homo sapiens -0.03894482766168039 SLAMTKPDR Oxidation (M) 1033.5226 0.5226295 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 1 7.5 0.5 1 1 34.76 34.794 3 0.06693 7391 20230619_1888_Aki_TMTPro18x_K_F8 52.725 28.636 91216 56032 89149 96670 115920 117490 110650 115330 133730 103760 134000 153400 144020 124460 127900 126050 153950 142230 84198 51678 91173 94495 118100 117130 112590 117660 134830 107030 138030 152450 145940 129390 131750 127570 146970 134960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136420000 24863 3881 23331 46739;46740 37649 37649 2559 1 9606 Homo sapiens 0.007209087031696981 SLANAESQQQR Unmodified 1230.5953 0.59527717 4007 Q53RZ9;Q9HCN4;Q9HCN4-5;Q9HCN4-3;Q9HCN4-2;Q9HCN4-4 MBDin;GPN1 GPN-loop GTPase 1 yes no 0 0 0 3.5 0.5 1 1 32.605 32.669 2 0.0043279 6600 20230619_1883_Aki_TMTPro18x_K_F4 88.681 62.083 6468.1 3496.5 8340.6 7015.2 11974 12249 7467.3 8948.9 8213.3 7036.6 12588 12493 9144.9 9028.6 8443.8 4384.3 11669 12716 5982.5 3234.4 8360 6857.5 12017 11908 7825.3 9313.7 8489.6 7381 12556 12309 9417 9185.6 8753.6 4960.6 11141 11985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19264000 24864 4007 23332 46741;46742 37650 37650 1 9606 Homo sapiens -0.010796659697234645 SLAPAGKD Unmodified 757.39702 0.39701828 540 P32322-3;P32322;A0A024R8U9;E7D7X9;A0A1B2JLU7;E7D7Y0;E2QRB3;Q2TU78;Q8TBX0 PYCR1;PIG45 Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase yes no 0 0 1 5 0 1 40.015 40.105 2 0.062288 9537 20230619_1885_Aki_TMTPro18x_K_F5 80.438 22.271 61622 30248 76471 68878 78464 71426 74785 79888 80121 53223 96606 116360 77784 82292 111010 45710 111770 99526 56952 28057 76407 66383 81079 72188 75845 80347 81805 57140 97722 113990 81663 84028 111960 49764 106850 94004 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55965000 24865 540 23333 46743 37651 37651 1 9606 Homo sapiens 0.008615649092348576 SLAPSLLDR Unmodified 970.54475 0.54474515 4266 Q8TBQ9 TMEM167A Protein kish-A yes yes 0 0 0 7.5 0.5 1 1 50.27 50.349 2 2.1828E-10 13714 20230619_1887_Aki_TMTPro18x_K_F7 160.56 87.772 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24866 4266 23334 46744;46745 37652;37653 37652 2 9606 Homo sapiens 0.058294564432458174 SLAQAAR Unmodified 715.39769 0.39768698 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 6.5 0.5 1 1 31.719 31.785 2 0.024502 6034 20230619_1887_Aki_TMTPro18x_K_F7 99.139 43.536 61863 37848 81707 69651 117680 118600 82556 103430 99795 26833 44552 39060 28207 26848 71563 21683 42045 29745 57265 34940 81793 68331 118330 115800 85845 104570 98254 31709 47643 38756 31388 27811 70095 22491 40429 28212 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18506000 24867 1292 23335 46746;46747 37654;37655 37655 2 9606 Homo sapiens 0.028604043489508513 SLAQEALR Unmodified 886.48723 0.48723027 4706 Q9Y2A7;Q9Y2A7-2;A0A994J4I5;A0A994J6K9;B3KMK7 NCKAP1 Nck-associated protein 1 yes no 0 0 0 5.5 0.5 1 1 41.419 41.509 2 0.0019893 10152 20230619_1885_Aki_TMTPro18x_K_F5 133.86 69.059 95133 67836 74210 85684 92116 94276 102790 106310 125100 87214 105920 104280 101910 78726 102780 115980 120020 94747 87736 62287 77466 85185 94572 94961 103680 107250 125260 89719 109400 104310 104150 84001 105510 114730 114500 90309 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183560000 24868 4706 23336 46748;46749 37656 37656 1 9606 Homo sapiens 0.039446142376732496 SLASQATR Unmodified 832.44028 0.44028008 306 B7Z6L2;A0A024R4U0;Q9NP61 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes no 0 0 0 6.5 0.5 1 1 31.347 31.412 2 0.0074523 5867 20230619_1887_Aki_TMTPro18x_K_F7 107.57 72.279 26814 17140 31614 26223 41415 49103 37031 39855 40772 13351 26886 22156 18888 17298 38335 11536 25955 18886 24797 15780 31837 26028 42140 47668 37707 40622 40655 15232 27897 21962 20457 17697 37803 12187 24904 17886 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8195500 24869 306 23337 46750;46751 37657 37657 1 9606 Homo sapiens 0.01735754686535529 SLATWENENK Unmodified 1190.5568 0.5567664 2949 P29762;F1T0F7 CRABP1 Cellular retinoic acid-binding protein 1 yes no 0 0 0 4.5 0.5 1 1 49.272 49.329 2 9.268000000000001E-35 13626 20230619_1883_Aki_TMTPro18x_K_F4 295.96 246.54 231960 217630 250320 252860 538310 682490 420900 410090 489520 385920 358620 369510 442290 338960 387250 395020 412320 386050 214820 199460 257300 257830 533930 650930 432930 436660 489720 391320 377870 374820 445950 353810 396150 395580 394080 366860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 646730000 24870 2949 23338 46752;46753 37658;37659 37658 2 9606 Homo sapiens -0.03088971604256585 SLCIGATYDVTDSR Unmodified 1556.7141 0.71407167 2315 B5MCF9;B2RDF2;O00541;O00541-2;B3KXD6;B3KTZ6 PES1 Pescadillo homolog yes no 0 0 0 5 0 1 51.841 51.915 2 1.6319E-11 14578 20230619_1885_Aki_TMTPro18x_K_F5 186.36 159.76 52342 41952 48722 46881 48626 59985 60280 54751 56287 66241 58175 63434 70782 57850 54856 80642 73930 68708 48366 38456 49798 47131 50862 59538 59973 56600 57718 66229 60183 64341 71089 61059 57255 79925 70515 65405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97089000 24871 2315 23339 46754 37660 37660 1 9606 Homo sapiens -0.042016798470513095 SLCIPFK Unmodified 863.45751 0.45751004 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 4 0 1 57.633 57.637 2 0.054708 17339 20230619_1883_Aki_TMTPro18x_K_F4 81.297 31.257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24872 3402 23340 46755 37661 37661 1 9606 Homo sapiens 0.020319589679729688 SLCIPFKPLCELQPGAK Unmodified 1957.0165 0.016525047 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 1 4.5 0.5 1 1 61.62 61.646 4 9.3315E-06 18990 20230619_1883_Aki_TMTPro18x_K_F4 99.569 78.678 138910 108830 135620 146030 116040 135360 141700 143900 138150 170840 166640 160490 168810 136670 167840 169770 150040 144480 128380 99954 137820 144270 122800 137860 141360 147150 142220 170800 169720 162580 172070 143520 169720 168680 143690 137520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 337990000 24873 3402 23341 46756;46757 37662 37662 1 9606 Homo sapiens 0.07629744567861962 SLCLGPALIHTAK Unmodified 1379.7595 0.75950572 1093 D3DVH1;A0A0S2Z4C9;B4DEL5;Q6IAQ2;A0A0S2Z4B7;Q99643-5;Q99643-3;Q99643 SDHC Succinate dehydrogenase cytochrome b560 subunit, mitochondrial yes no 0 0 0 4 0 1 52.867 52.89 3 3.8661E-06 15292 20230619_1883_Aki_TMTPro18x_K_F4 130.61 100.04 113690 92308 107730 119010 108890 118500 135160 137770 145740 133440 115050 111520 153080 118170 101570 165890 148690 164110 105070 84731 110030 118000 113710 120300 135070 139270 146700 134440 121090 114550 152560 124290 107150 165610 141910 155840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 378330000 24874 1093 23342 46758 37663 37663 1 9606 Homo sapiens 0.0848163519665377 SLCREEAETPAEATGKPQR Unmodified 2129.0171 0.017129987 2595 B4DUT2;A0A024R7C4;A0A494C108;Q8N9T8 FLJ12949;KRI1 Protein KRI1 homolog yes no 0 0 2 4 0 1 36.7 36.746 4 0.0023924 8229 20230619_1883_Aki_TMTPro18x_K_F4 70.986 61.802 27177 25059 25953 26072 33162 27412 28735 34118 31497 34784 29045 24645 36967 23877 24019 36250 36862 26685 25141 22945 26561 26290 33687 27808 29332 34379 31885 34791 30218 25480 36825 25340 25423 35657 35075 25485 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38009000 24875 2595 23343 46759 37664 37664 1 9606 Homo sapiens -0.002217892494172702 SLCSDDTPMVR Unmodified 1279.5537 0.55367163 2118 A8K8B0;P30154;P30154-2;P30154-4;P30154-3;B7Z1G3 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 3 0 1 43.035 43.101 2 9.3884E-12 10949 20230619_1882_Aki_TMTPro18x_K_F3 195.58 188.01 93627 71873 80572 81098 170630 143140 134510 126400 116010 119230 137470 100580 107320 74835 133590 95401 81109 66642 86441 65902 84255 81969 168730 139770 137090 130010 120140 120280 138530 102180 111530 79175 132280 94079 78012 63655 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59116000 24876 2118 23344 46760 37665 37665 1 9606 Homo sapiens -0.0749230604492368 SLCSITDPANEK Unmodified 1333.6184 0.61838038 2366 B3KNU0;P52306-4;P52306;P52306-5;D6RHH8;D6REZ0 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes no 0 0 0 5 0 1 49.218 49.294 2 0.00034102 13513 20230619_1885_Aki_TMTPro18x_K_F5 111.61 93.446 11615 8487.7 9672.4 11038 9290.8 10737 9945 10280 9532.5 12461 14870 14736 15214 14666 8757.4 15807 15383 17843 10718 7795 9988.8 10932 9704.6 10868 9986.1 10595 9956.2 12541 15010 14860 15224 15186 9424.4 15958 14671 16916 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8978200 24877 2366 23345 46761 37666 37666 1 9606 Homo sapiens -0.035084079673197266 SLDALGIDSR Unmodified 1045.5404 0.54038805 4810 yes no 0 0 0 5 0.707 1 2 1 42.409 42.496 2 0.0019748 10482 20230619_1885_Aki_TMTPro18x_K_F5 98.933 57.041 + 135470 82868 90724 126940 191470 127800 157660 150290 174330 113190 128630 118970 106690 83355 130710 124700 162040 120480 124730 76310 97528 124510 189460 129840 161290 151010 174680 116610 133160 119410 110750 89366 134170 124420 154450 114630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 773230000 24878 4810 23346 46762;46763;46764;46765 37667;37668 37668 2 9606 Homo sapiens 0.019439472296653548 SLDAPSWPGVYR Unmodified 1346.6619 0.66190017 4053 Q5SRE5;Q5SRE5-2;Q9BS12 NUP188 Nucleoporin NUP188 homolog yes no 0 0 0 1 0 1 56.035 56.035 2 4.5844E-05 16848 20230619_1880_Aki_TMTPro18x_K_F1 154.05 126.92 45005 41821 48314 58438 56407 63325 62725 66852 66324 64668 66121 63647 69512 56657 62852 76004 68867 78505 41676 38404 48997 57692 58108 63723 62994 67977 67366 65431 67984 64464 70508 59719 64439 76160 65900 74503 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26571000 24879 4053 23347 46766 37669 37669 1 9606 Homo sapiens 0.0024356959218039265 SLDDALK Unmodified 760.39668 0.39668393 2183 B0YJ76;P00374;B4DM58;A0A024RAQ3;P00374-2;C9JJ68;B3KV46;Q86XF0 DYR;DHFR;DHFRL1 Dihydrofolate reductase;Dihydrofolate reductase, mitochondrial yes no 0 0 0 4 0.816 1 1 1 47.785 47.851 2 0.048383 13195 20230619_1882_Aki_TMTPro18x_K_F3 86.953 48.715 131290 90234 117490 125830 118640 133760 130450 128530 169840 137210 153450 136800 153840 136950 125540 129290 151030 140630 121180 82955 120570 124230 123580 134500 132060 131920 170010 138290 158070 138930 155710 140860 129580 130700 144190 133490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193270000 24880 2183 23348 46767;46768;46769 37670 37670 1 9606 Homo sapiens 0.006901451893895683 SLDDDLDGVPLDATEDSK Unmodified 1903.8535 0.85346151 3231 O15042-2;O15042;E7ET15;O15042-3;H7C4V2 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 0 0 0 1 0 1 59.811 59.811 3 9.2399E-07 18361 20230619_1880_Aki_TMTPro18x_K_F1 111.7 101.36 37119 30417 37176 43967 31494 42455 41175 42090 46624 44001 41133 43563 41459 34785 42098 44716 46075 45449 34323 27955 37727 43248 33485 43003 41130 43084 46969 44350 42501 43935 42338 36702 43030 44810 44042 43162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125560000 24881 3231 23349 46770 37671 37671 1 9606 Homo sapiens -0.06231108539350316 SLDDEVNAFK Unmodified 1136.535 0.53496832 3875 Q14141;Q541S4;Q548C9;B1AMS2;Q6B514;B4DZW0;Q8NFH9;Q14141-2;Q14141-4;B4DPT4;Q6NT82;B4E049 SEPT6 Septin-6 yes no 0 0 0 4 0 1 55.192 55.204 2 0.0036698 16307 20230619_1883_Aki_TMTPro18x_K_F4 96.342 62.604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24882 3875 23350 46771 37672 37672 1 9606 Homo sapiens -0.02783776352816858 SLDEMEK Oxidation (M) 866.36915 0.36914855 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 1 0 1 0 1 38.298 38.298 2 0.017422 9315 20230619_1880_Aki_TMTPro18x_K_F1 101.33 14.855 159500 110050 161040 163810 231520 217970 216590 222120 238830 171260 210100 207720 215030 176560 210240 160810 264620 215570 147350 101250 164520 161690 234190 216400 219890 225200 240690 177000 217150 208160 219100 182420 216550 165100 252320 204350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124260000 24883 1450 23351 46772 37673 37673 953 1 9606 Homo sapiens -0.06938126133150035 SLDEMEK Unmodified 850.37423 0.37423392 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2;H0Y9K7 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 1.5 0.5 1 1 45.265 45.306 3 0.030337 12290 20230619_1881_Aki_TMTPro18x_K_F2 69.176 18.21 44407 41121 50410 48812 51667 63122 54336 51620 82341 56482 67933 54094 75175 73724 48838 48337 112880 69365 41142 37696 50727 48854 53723 62468 55481 53659 81628 56862 70552 55713 75390 74062 53626 50180 107080 65820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68616000 24884 1450 23351 46773;46774 37674 37674 1 9606 Homo sapiens -0.056938222705412045 SLDFYTR Unmodified 900.43413 0.43413207 3793 X5DNM4;V9HW62;Q04760-2;Q04760 GLO1;HEL-S-74 Lactoylglutathione lyase yes no 0 0 0 6.5 0.5 1 1 48.45 48.533 2 0.0038271 12906 20230619_1887_Aki_TMTPro18x_K_F7 152.39 77.951 1235100 829730 938210 1352300 1207700 1157000 1138700 1166100 2002700 1140500 1215700 1468100 1452500 1317600 875820 2060500 2094800 2006400 1138500 764330 983990 1318900 1232400 1184900 1177800 1190800 1957400 1166100 1295300 1471700 1450200 1402700 974530 2051600 1991900 1906600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1017299999.9999999 24885 3793 23352 46775;46776 37675;37676 37676 2 9606 Homo sapiens -0.020067635449890986 SLDGAAAVDSADR Unmodified 1246.579 0.5789584 3431 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;P11171-5;Q4VB87;A0A994J847;Q29RX4;A0A2R8YCW8;A0A3B3ITP0;P11171-7;A0A2R8Y5Z6;A0A2R8Y7Y3;A0A2R8Y5G2;P11171-6;A0A2R8Y570;A0A2R8Y420;A0A3B3IU06;A0A2R8YFR9;A0A2R8Y6G5;A0A3B3IUD6;A0A2R8Y7N0;A0A2R8Y4N6 EPB41 Protein 4.1 yes no 0 0 0 2 0 1 40.995 41.068 2 4.4442E-21 10284 20230619_1881_Aki_TMTPro18x_K_F2 233.45 197.57 53787 40325 48501 49238 40410 49719 45144 49756 51013 60625 73160 79926 68457 66164 64526 75647 77479 85041 49669 37006 49589 49011 42803 50233 45481 51122 52534 61246 73857 79787 69886 69167 66464 76360 74059 80645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48563000 24886 3431 23353 46777 37677 37677 1 9606 Homo sapiens -0.034467919264670854 SLDIQSLDIQCEELSDAR Acetyl (Protein N-term) 2132.9896 0.98957783 1206 A0A140VJT8;P13489;E9PIM9;E9PMJ3;E9PLZ3;E9PIK5;E9PMA9;E9PR82;E9PMI1 RNH1 Ribonuclease inhibitor yes no 1 0 0 1 0 1 64.041 64.041 2 3.4634E-18 20137 20230619_1880_Aki_TMTPro18x_K_F1 146.5 131.82 1917.6 0 952.63 1723.3 1203 1997.4 1358.1 1999.5 1636.1 2613.2 1976.7 1879.4 2649.1 2626 1529.2 1603.7 1441.2 1694.1 1754.7 0 1057.1 1597 1242.4 1992.9 1370.3 2056.1 1670.6 2584.8 2039.4 1963.7 2630.5 2629.5 1570.3 1634.1 1381.5 1607.2 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15063000 24887 1206 23354 46778 37678 37678 1 9606 Homo sapiens -0.03159737300302368 SLDIQVPNFPADETK Unmodified 1672.8308 0.83081599 2024;1277 A0A1B0GVU9;Q9H3A5;Q9BUZ3;B4DDN1;Q96AW5;H7C0R3;A0A0U1RQX5;A0A0U1RRC8;Q53HS0;A8K3A8;P47897-2;P47897;B4DNN3 QARS Glutamine--tRNA ligase no no 0 0 0 5 0 1 61.44 61.488 3 0.013069 18551 20230619_1885_Aki_TMTPro18x_K_F5 62.055 51.016 93006 85365 92947 102600 102390 121840 106620 103350 127270 103820 104210 102480 104920 88328 105560 110600 97059 100810 86065 78268 94637 102430 105820 121300 107880 106880 127510 104920 108040 103640 107080 92749 106900 110230 92973 95843 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 211390000 24888 1277;2024 23355 46779 37679 37679 1 9606 Homo sapiens 0.021313816443580436 SLDLDSIIAEVK Unmodified 1301.7078 0.70784731 2778;2803 H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRF9;CON__Q922U2;CON__Q5XQN5;CON__Q8BGZ7;CON__P50446 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 6 0 1 64.422 64.468 3 0.00063585 20116 20230619_1886_Aki_TMTPro18x_K_F6 102.62 60.525 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24889 2778;2803 23356 46780 37680 37680 1 9606 Homo sapiens 0.06906169983744803 SLDLFNCEITNLEDYR Unmodified 2000.915 0.91495633 3989 Q53F20;Q9BTT0;E9PPH5;Q9BTT0-3;Q9BTT0-2 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E yes no 0 0 0 4 0 1 64.147 64.155 3 8.6405E-06 20081 20230619_1883_Aki_TMTPro18x_K_F4 105.53 96.477 8975.2 7443.2 10225 10191 8991.8 12542 11254 10034 12650 15227 14052 11658 13393 12279 12385 15062 11840 14518 8309.4 6836.2 10269 10093 9515.8 12439 11260 10562 12876 15003 14306 12024 13645 12793 12598 15053 11352 13786 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18405000 24890 3989 23357 46781 37681 37681 1 9606 Homo sapiens -0.04546455321042231 SLDLFNCEVTNLNDYR Unmodified 1971.8996 0.89964061 1493;3990 A0A384P5U2;P39687;H0YN26;Q6PKH8;Q08AJ6;Q1AHP8;Q53F35;Q92688-2;Q92688 ANP32A;ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member B no no 0 0 0 5.67 0.471 1 2 62.625 62.675 2;3 1.2404E-63 19323 20230619_1886_Aki_TMTPro18x_K_F6 316.93 308.11 696520 514490 587180 705340 562190 706050 689680 707650 700150 812690 764090 841110 864400 777300 724910 948210 875650 982190 642830 472750 606040 696390 590180 713590 688520 725680 715950 816310 785840 850330 872810 812840 749180 951330 837090 932140 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 10531000000 24891 1493;3990 23358 46782;46783;46784 37682;37683;37684 37684 3 9606 Homo sapiens -0.04743322118224569 SLDLFNCEVTNLNDYRENVFK Unmodified 2589.217 0.21695201 1493 A0A384P5U2;P39687;H0YN26;Q6PKH8;Q08AJ6;Q1AHP8 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A yes no 0 0 1 7.5 0.5 1 1 62.995 63.024 4 0.024044 19204 20230619_1887_Aki_TMTPro18x_K_F7 55.127 41.111 973280 703190 773910 712480 945880 996050 1010200 910350 1131000 943940 798410 739550 808870 615690 960910 893510 832960 984850 897780 644320 804990 723070 970800 984170 1017900 936620 1132000 946380 835380 756030 832000 654670 967080 898620 799260 933890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3452999999.9999995 24892 1493 23359 46785;46786 37685 37685 1 9606 Homo sapiens -0.01408779092344048 SLDLLLAAAAATGK Unmodified 1313.7555 0.7554662 980 B4DDR8;F5H5K2;B4DV99;B4E1A5;B4DSQ6;F5GY88;A0A0B4J1W0;O75448-2;O75448;B4E0S3 MED24 Mediator of RNA polymerase II transcription subunit 24 yes no 0 0 0 3 0 1 64.949 64.98 3 0.0098983 20562 20230619_1882_Aki_TMTPro18x_K_F3 65.805 47.941 7068.7 5626 6738.2 6492.7 5839.4 7958.6 8721.8 7557 8152.5 6273.3 7109.2 5711.8 7034.8 8280.6 7629.6 6440.6 6263.3 8172.6 6532.6 5159 6861.2 6507.5 6222.6 7923.6 8605.8 7715.7 8286.3 6399.5 7334.3 5918 7224.2 8353.6 7666.6 6604.1 6019.1 7737 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30942000 24893 980 23360 46787 37686 37686 1 9606 Homo sapiens 0.11113868974598518 SLDLVTMK Unmodified 905.4892 0.4892041 1492;3875;886 A0A087X142;B7ZVZ1;A6NMH6;A6NFQ9;F8W8I8;Q92599-3;Q92599-2;Q92599-4;Q92599;C9JV02;D6RGI3;A0A384P5S0;D6RER5;Q9NVA2;Q9NVA2-2;D6RDU5;Q14141;Q541S4;Q548C9;B1AMS2;Q6B514;B4DZW0;Q8NFH9;Q14141-2;Q14141-4;B4DPT4;Q6NT82;B4E049;Q8NFI2;Q8NFI0;Q14141-3 SEPT8;SEPT11;SEPT6 Septin-8;Septin-11;Septin-6 no no 0 0 0 7.5 0.5 1 1 55.891 55.953 2 0.0011326 16101 20230619_1888_Aki_TMTPro18x_K_F8 168.66 84.815 407480 339830 389360 402500 373760 438300 445040 432770 499460 474580 459020 403540 504260 391890 447970 516120 537890 477780 376700 311640 396940 401900 391640 440360 446280 443600 504190 475320 474470 412820 510410 411410 461830 514310 513360 454430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 335550000 24894 886;1492;3875 23361 46788;46789 37687 37687 1 9606 Homo sapiens 0.03267906931262132 SLDNFFAK Unmodified 940.46543 0.46543219 4680 Q9UKY7;A0A8I5KX85;Q9UKY7-2;D3DND1;H0Y8K3 CDV3 Protein CDV3 homolog yes no 0 0 0 1 0 1 59.173 59.173 3 0.024608 18169 20230619_1880_Aki_TMTPro18x_K_F1 55.872 38.008 269410 242510 273170 288420 283070 282890 287890 306970 290910 351240 324760 312150 333740 279860 321810 398410 351630 352280 249300 222340 277370 287520 293070 287170 290260 313050 297940 351220 331980 317720 339760 296010 329530 395640 336150 335080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 326820000 24895 4680 23362 46790 37688;37689 37689 2 9606 Homo sapiens -0.007181905109064246 SLDNNYSTPNER Unmodified 1408.6219 0.62188585 1594 O60716;H0YC95;O60716-3;O60716-2;Q68DU0;C9JZR2;A0A669KB05;O60716-5;O60716-11;O60716-10;O60716-9;O60716-17;Q96FS1;O60716-21;O60716-19;O60716-13;O60716-18;Q7KZJ3;O60716-26;A0A024R4Z0;O60716-25;O60716-27;O60716-29;A0A804HIL4;A0A804HK15 CTNND1;DKFZp781O2021 Catenin delta-1 yes no 0 0 0 2.5 0.5 1 1 37.767 37.826 2 2.8443E-17 8713 20230619_1882_Aki_TMTPro18x_K_F3 220.1 198.1 66245 49980 56676 61770 69211 75776 73832 70694 83774 90362 96362 89824 97944 80295 71724 104630 102730 88781 61151 45871 58595 61593 71047 75450 74474 73088 85318 90249 98261 90934 98669 84416 75284 103770 97899 84544 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138450000 24896 1594 23363 46791;46792 37690;37691 37691 2 9606 Homo sapiens -0.06608021869055847 SLDQAINDK Unmodified 1002.4982 0.49818889 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 4 0 1 46.915 46.957 3 0.012196 12589 20230619_1883_Aki_TMTPro18x_K_F4 65.719 39.047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24897 4191 23364 46793 37692 37692 1 9606 Homo sapiens -0.0029602817870681974 SLDQDPVVR Unmodified 1027.5298 0.52982336 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72;Q5TBM3 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 2.5 0.5 1 1 40.619 40.685 2 4.6623E-08 10089 20230619_1881_Aki_TMTPro18x_K_F2 200.27 166.45 272850 207940 246770 251520 274360 305330 287040 291370 338510 330750 349170 326090 378130 286570 277370 386940 379720 308840 251990 190800 253300 251180 283280 304360 290300 299600 342430 332040 358710 330120 380060 302250 290050 382560 361830 294420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 328480000 24898 769 23365 46794;46795 37693;37694 37693 2 9606 Homo sapiens 0.017159645752371944 SLDQEIARPLENENQEFLK Unmodified 2272.1335 0.13353995 2830 D3DVC4;P48681 NES Nestin yes no 0 0 1 4 0.816 1 1 1 57.432 57.463 3 5.0974E-10 17244 20230619_1883_Aki_TMTPro18x_K_F4 122.77 105.28 199590 162080 194430 190800 189330 230130 289940 278730 307410 367290 289740 269970 373910 262710 281380 415860 281260 303790 184510 148640 197960 190970 199870 230800 286920 283570 311920 363350 301600 278420 374150 279510 288510 408750 269270 289640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 266880000 24899 2830 23366 46796;46797;46798 37695 37695 1 9606 Homo sapiens 0.04835852522137429 SLDSFLLSPEAAVGLLK Unmodified 1758.9768 0.97675195 434 E9PFH4;B2R6H7;A0A024R794;Q9Y5L0-3;Q9Y5L0;B3KMX1;B3KM69;C9J7E5;Q9Y5L0-1 TNPO3 Transportin-3 yes no 0 0 0 2 0 1 66.26 66.267 3 0.01068 21371 20230619_1881_Aki_TMTPro18x_K_F2 61.641 46.486 4552.5 3211.9 3038.5 4035.3 2456.5 3761.4 4802.4 3665.7 3437.2 5475.7 5044.3 4825.9 5402.4 3361.7 3990.7 6018.3 4959 5551.3 4194.3 2949.2 3212.4 4002.7 2668.1 3819.8 4661.5 3803.6 3650.1 5411.8 5113.3 4880.1 5426.7 3662.3 4148 5971.7 4739.5 5275.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18859000 24900 434 23367 46799 37696 37696 1 9606 Homo sapiens 0.12762264160437553 SLDSSTPLPIVR Unmodified 1283.7085 0.70851601 2049 Q6PCC8;A8K4P8;Q14146 URB2 Unhealthy ribosome biogenesis protein 2 homolog yes no 0 0 0 7 0 1 52.768 52.838 2 0.00017516 14857 20230619_1887_Aki_TMTPro18x_K_F7 140.16 110.18 27989 21482 26631 32201 27146 30635 31559 29062 35430 30327 34324 29123 36467 31115 31570 35340 35497 36169 25860 19757 27209 31598 28284 31049 31679 29850 35811 30564 35325 29720 36920 32259 32426 35482 33930 34343 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34959000 24901 2049 23368 46800 37697 37697 1 9606 Homo sapiens 0.0780100942347417 SLDTHVTK Unmodified 899.47125 0.47124585 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 6 0 1 37.262 37.33 3 0.003079 8466 20230619_1886_Aki_TMTPro18x_K_F6 93.098 44.302 177110 97126 256810 250440 317510 317440 228300 277680 231810 194120 339820 357470 224720 243790 287800 111110 338650 331630 164040 90251 255030 240890 322110 314750 235850 284140 239920 205570 338740 351300 236330 248180 293340 126730 323470 312670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63283000 24902 307 23369 46801 37698;37699 37698 2 9606 Homo sapiens 0.01748908000774918 SLDTSEEGGR Unmodified 1049.4625 0.46253166 4409 Q9BPX3;Q6NUR1 NCAPG Condensin complex subunit 3 yes no 0 0 0 1 0 1 33.137 33.137 2 0.00014249 7239 20230619_1880_Aki_TMTPro18x_K_F1 140.83 121.05 15474 6767.1 16285 18776 19048 23944 17766 20623 21242 18368 26059 31927 24948 28108 20881 12157 32988 33874 14273 6306.8 16535 18012 19558 23709 18108 21236 21617 19104 26495 31617 25359 28270 21921 13722 31452 31941 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13686000 24903 4409 23370 46802 37700 37700 1 9606 Homo sapiens -0.06022110426351901 SLDWENPTEREDDSDK Unmodified 1934.813 0.81299368 1056 A0A0S2A4E4;A0A0M4G3H8;P35573-2;P35573-3;P35573;G1UI17 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes no 0 0 1 1 0 1 47.984 47.984 3 0.015631 13527 20230619_1880_Aki_TMTPro18x_K_F1 58.824 48.865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24904 1056 23371 46803 37701 37701 1 9606 Homo sapiens -0.11702030139122144 SLDYIHR Unmodified 902.46102 0.46101552 4777 yes no 0 0 0 6 0 1 37.905 37.98 3 0.013725 8705 20230619_1886_Aki_TMTPro18x_K_F6 86.866 35.9 + 59776 49598 60006 61002 56699 62580 67805 65762 73161 67461 80609 71743 82927 69298 66716 87652 89694 65337 55280 45502 60897 60705 59446 63238 67901 67020 74489 68230 82379 72640 83803 72496 69501 86490 85427 62384 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28366000 24905 4777 23372 46804 37702 37702 1 9606 Homo sapiens 0.005883450661940515 SLEAQVAHADQQLR Unmodified 1564.7958 0.79576789 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;K4DIE0;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 4.5 0.5 1 1 44.501 44.563 3 9.2119E-58 11509 20230619_1883_Aki_TMTPro18x_K_F4 290.16 197.62 172020 142110 159380 162970 156090 178890 182020 159440 181360 193340 211950 195760 201190 181790 184040 202460 213290 193910 158970 130290 162940 163110 163130 179270 182010 165220 186040 193660 215440 198190 204940 189020 189160 202620 203660 184340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 848030000 24906 349;3906 23373 46805;46806 37703;37704 37703 2 9606 Homo sapiens 0.03596183627087157 SLEDALAEAQR Unmodified 1201.5939 0.59388018 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 3.67 0.471 1 2 52.544 52.585 2 6.399E-06 15312 20230619_1882_Aki_TMTPro18x_K_F3 155.57 130.32 106200 92907 110160 118760 97058 115540 114340 113090 129040 143040 128950 125030 149630 117220 116540 154010 137720 146410 98269 85250 111440 117760 102380 117010 114780 116510 130740 142390 133160 127510 150430 123180 120470 153630 131620 139100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 320520000 24907 128 23374 46807;46808;46809 37705;37706 37705 2 9606 Homo sapiens 0.0011469994149138074 SLEDALSSDTSGHFR Unmodified 1620.738 0.73797824 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;Q6ZP35;E7EMC6;A0A0S2Z377;E5RK69 ANXA6 Annexin A6;Annexin no no 0 0 0 4 0 1 49.148 49.185 3 0.00029439 13621 20230619_1883_Aki_TMTPro18x_K_F4 90.725 76.035 70770 54512 66363 66959 71000 74384 72807 73177 81925 71680 81596 74821 73844 65395 76737 80334 76890 81773 65382 50023 67846 66709 73415 74639 73604 74800 82891 72633 83361 75543 75764 68549 78013 80561 73600 77635 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126340000 24908 1062;1064 23375 46810 37707 37707 1 9606 Homo sapiens -0.047561230890323714 SLEDGLNR Unmodified 902.44576 0.44575938 1193 B4DIZ6;A0A140VJQ3;Q96DE0-3;Q96DE0;Q96DE0-2;Q96DE0-4 NUDT16 U8 snoRNA-decapping enzyme yes no 0 0 0 2 0.816 1 1 1 39.961 40.004 2 0.0076725 9797 20230619_1881_Aki_TMTPro18x_K_F2 121.31 35.5 126610 102630 120220 126560 134440 138370 145260 130230 164190 141130 168560 159530 165930 133400 157980 163340 193040 167190 117010 94165 122900 126000 138750 138880 146390 133950 166270 142660 172570 160300 169030 140080 162730 163870 184180 158850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108350000 24909 1193 23376 46811;46812;46813 37708 37708 1 9606 Homo sapiens -0.009365665216591879 SLEDLIFESLPENASHK Unmodified 1927.9527 0.95272204 1749 A0A8I5KVF5;A0A8I5KS65;A0A8I5KWA6;A0A8I5KT53;A0A8I5KXC6;F5GXE4;B4DR48;A0A8I5KTH0;A0A8I5KXU0;A0A8I5KXF6;A0A8I5KNT9;A0A8I5KZ28;A0A8I5KNV5;A0A8I5KWU7;B2R7P0;F8WAC9;A0A8I5KSC8;A0A8I5KVR2;A0A8I5QKV3;B4E107;A0A8I5KQ75;B4DK25;A0A8I5KYL1;A0A8I5KWF1;A0A8I5KX91;A0A8I5KZ10;B4DIK1;A0A8I5KZ24;O95260;O95260-2 ATE1 Arginyl-tRNA--protein transferase 1 yes no 0 0 0 5 0 1 63.422 63.468 3 0.0014583 19515 20230619_1885_Aki_TMTPro18x_K_F5 71.558 53.641 36574 29897 31681 36152 30880 40497 33260 35810 38007 44387 37614 41758 44036 37222 41790 46505 40558 46194 33782 27425 32610 36048 32273 40501 33560 37128 38490 44310 38927 42338 44628 39042 42495 46553 38857 43858 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77221000 24910 1749 23377 46814 37709 37709 1 9606 Homo sapiens 0.025863789361210365 SLEDLQDEYDFK Unmodified 1500.662 0.66201933 1598 P42224;P42224-2;A0A669KB53;A0A669KBA4;A0A669KB56;A0A669KB68;A0A8V8TN81;A0A669KBI6;J3KPM9;A0A669KB52;A0A669KB75;E7EPD2;A0A669KB17;A0A8V8TLI6;D2KFR9;A5D905 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription yes no 0 0 0 3 0.816 1 1 1 60.789 60.803 3 8.111E-06 18742 20230619_1882_Aki_TMTPro18x_K_F3 137.4 116.44 36737 32892 42053 39848 39450 45653 37053 40984 45468 43970 45736 48015 48932 41617 47415 49353 43803 51671 34031 30163 42219 39755 41135 45616 37794 42263 45867 44405 47072 48342 49759 43551 48056 49598 42000 49024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139450000 24911 1598 23378 46815;46816;46817 37710 37710 1 9606 Homo sapiens -0.06828519989153392 SLEDPFFVVR Acetyl (Protein N-term) 1249.6343 0.63428844 3278 X6R2W0;Q5U8S2;O60499;F6RTM7;K7EK75;O60499-2 STX10 Syntaxin-10 yes no 1 0 0 3.5 0.5 1 1 65.661 65.683 2 4.7074E-08 20810 20230619_1882_Aki_TMTPro18x_K_F3 119.27 89.465 5971.8 4098.7 6200.3 6501.8 5719.6 5477.5 5691.6 4741.4 7379.2 8377.1 6085.3 7032.6 7641.8 5911 5734.5 8644.8 6999.9 8157.2 5518.1 3773.9 6272 6351.7 5973.8 5601.1 5792.3 4997 7383.1 8230.6 6376.9 7156.3 7657.1 6282.6 5951.2 8606.3 6693.3 7748.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20129000 24912 3278 23379 46818;46819 37711 37711 1 9606 Homo sapiens 0.019456663319488143 SLEDQVEMLR Oxidation (M) 1234.5864 0.58635197 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;A0A0S2Z4D8;A0A0S2Z4W7;A2VCQ4;A0A0S2Z4A0 PRKCSH Glucosidase 2 subunit beta yes no 0 1 0 2.5 0.5 1 1 49.911 49.978 2 0.0089144 14108 20230619_1882_Aki_TMTPro18x_K_F3 74.772 38.377 140670 111710 116810 147940 164050 137720 143840 143550 167270 160560 177880 167010 169900 132840 172120 188580 161130 194890 129870 102570 121480 146250 165860 140280 146930 146740 169520 161530 181600 168190 173650 141170 174490 188900 154510 184910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 521330000 24913 444 23380 46820;46821 37712;37713 37713 278 2 9606 Homo sapiens -0.021557756504080317 SLEDVVR Unmodified 816.43413 0.43413207 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 3 0.816 1 1 1 44.26 44.327 2 0.013089 11425 20230619_1883_Aki_TMTPro18x_K_F4 114.43 17.92 87398 71877 75151 78451 84708 106820 92131 80415 115910 87825 90034 93484 99274 77263 90997 100740 106570 95364 80723 65868 77545 79063 87603 105250 93142 84201 115630 88624 94021 94105 100620 81496 93584 100530 101740 90675 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 763690000 24914 3152 23381 46822;46823;46824 37714 37714 1 9606 Homo sapiens 0.0185723645500957 SLEEDLETLK Unmodified 1175.5921 0.59214885 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 3 0 1 61.56 61.59 3 4.6438E-07 19054 20230619_1882_Aki_TMTPro18x_K_F3 140.05 99.896 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24915 2830 23382 46825 37715 37715 1 9606 Homo sapiens 0.011376461329064114 SLEEDQEPIVSHQKPGK Unmodified 1919.9589 0.95887005 618 A0A024RAC6;Q14241 TCEB3 Transcription elongation factor B polypeptide 3 yes no 0 0 1 4 0 1 41.718 41.761 4 1.7864E-06 10316 20230619_1883_Aki_TMTPro18x_K_F4 117.2 105.93 40876 37403 46089 47635 54216 60259 55291 51226 53998 55215 57170 49487 52547 40151 56819 40189 47524 35891 37865 34314 46522 47422 55672 59765 55645 53065 55227 55412 58271 50170 53928 41747 57091 40213 45480 34177 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57443000 24916 618 23383 46826 37716 37716 1 9606 Homo sapiens 0.035688971675881476 SLEEEGQELPQSADVQR Unmodified 1913.8967 0.89666373 2830 D3DVC4;P48681 NES Nestin yes no 0 0 0 1 0 1 46.649 46.649 3 2.1849E-38 12963 20230619_1880_Aki_TMTPro18x_K_F1 254.72 225.96 43419 36737 45790 49269 44173 47000 58971 59061 66280 81758 59907 62562 79103 59374 62170 92425 69537 69182 40175 33730 46324 48705 46384 47977 58817 60085 66980 80789 62616 64281 79276 63119 64092 90953 66459 65957 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 463090000 24917 2830 23384 46827 37717 37717 1 9606 Homo sapiens -0.02372873971376066 SLEEEQR Unmodified 889.41412 0.4141249 785 Q14155-5;A0A8V8TQ72;Q14155-1;A0A2R8YG42;B7Z6G2;B1ALK7;A0A024RDY9 ARHGEF7 Rho guanine nucleotide exchange factor 7 yes no 0 0 0 1 0 1 31.401 31.401 2 0.089289 6542 20230619_1880_Aki_TMTPro18x_K_F1 71.501 7.9361 13893 7645 20325 21915 29642 30332 24307 26641 19401 13064 25067 29453 17625 20716 26477 9400.5 26393 27724 12870 7120.1 20260 21035 29856 29919 24681 27109 20231 14428 25177 28834 18680 21047 26667 10712 25262 26134 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13824000 24918 785 23385 46828 37718 37718 1 9606 Homo sapiens -0.03500559275607884 SLEEGEGPIAVIMTPTR Unmodified 1798.9135 0.91349976 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 4.5 0.5 1 1 61.6 61.625 2 1.0732E-37 18998 20230619_1883_Aki_TMTPro18x_K_F4 276.28 227.54 59591 42290 53246 57416 50874 65685 62816 61375 64747 65317 62428 66342 77655 59650 63331 80963 74268 73637 55008 38862 54623 56836 53433 65656 62706 63106 65791 65830 64852 67096 78059 62898 65351 80554 70949 70021 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 50670000 24919 1002 23386 46829;46830 37719;37720 37719 2 9606 Homo sapiens 0.04599955380854226 SLEEIYLFSLPIK Unmodified 1550.8596 0.85959692 3457 P15880;Q6IPX5;Q3KQT6;Q8N5L9;H0YEN5;Q8J014;E9PQD7;E9PMM9;E9PPT0;Q8NI61;D3DU83;H0YE27;H3BNG3 RPS2;rps2;OK/KNS-cl.7 40S ribosomal protein S2 yes no 0 0 0 1.5 0.5 1 1 65.594 65.597 3 5.1359E-06 20753 20230619_1880_Aki_TMTPro18x_K_F1 125.54 110.57 176850 128860 167740 151800 131260 175340 175710 157850 188930 187890 168330 153850 211060 191690 213890 226740 180930 234820 163350 118230 170550 151790 140680 175060 175010 163290 190990 187340 175540 159150 214240 198360 215720 227700 173810 222750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 380720000 24920 3457 23387 46831;46832 37721;37722 37721 2 9606 Homo sapiens 0.10620151011448797 SLEELLLDANQLR Unmodified 1512.8148 0.814772 1039 A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160;Q14160-3;Q5T0G3;A8K883;Q9BTT6-2;Q9BTT6 SCRIB;LRRC1 Protein scribble homolog;Leucine-rich repeat-containing protein 1 yes no 0 0 0 5 0 1 64.423 64.467 3 0.032691 19957 20230619_1885_Aki_TMTPro18x_K_F5 40.025 30.836 14257 17399 14513 14311 15582 15607 15658 15240 17815 16340 17867 16881 21285 18056 20411 20292 20415 22370 13225 15890 14734 14744 16091 15698 15853 15625 18030 16479 18476 17165 21572 18710 20770 20473 19546 21218 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29875000 24921 1039 23388 46833 37723 37723 1 9606 Homo sapiens 0.07887720198141324 SLEELRLEDYQANRK Unmodified 1862.9486 0.94863972 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPX4;A0A8V8TRC7;A0A3B3ITD8;A0A024RCC4;H0YDA1;A0A8V8TRD0;A8KA17;A0A8V8TQG5;P52948-3;P52948-4;B4DWF8;A0A1D8GZ56;A0A142I7X2;A0A1D8GZ64;A0A8V8TPX8;A0A1D8GZ55 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 2 6.5 0.5 1 1 46.949 47.035 4 0.015129 12220 20230619_1887_Aki_TMTPro18x_K_F7 66.022 53.23 76726 75986 83109 87120 88332 97798 85021 81707 96806 89074 94859 82669 90841 69867 89172 101610 92415 94801 71088 69620 83991 87213 91244 97738 86302 84800 97869 89458 97166 83860 92712 74204 90957 101170 88407 90106 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181120000 24922 1852 23389 46834;46835 37724 37724 1 9606 Homo sapiens 0.05168334233053429 SLEEQDQETLR Unmodified 1346.6314 0.6313879 2830 D3DVC4;P48681 NES Nestin yes no 0 0 0 1 0 1 39.872 39.872 2 7.974E-23 10008 20230619_1880_Aki_TMTPro18x_K_F1 248.96 217.53 188270 151110 148090 151560 193240 225320 260450 275400 350420 326310 278660 270410 384530 252740 243570 402230 304000 275800 173760 138390 154580 154160 199260 223400 261290 278940 349150 325370 293680 276670 381960 269390 254370 394250 290080 263400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 381420000 24923 2830 23390 46836 37725 37725 1 9606 Homo sapiens -0.02806253583526086 SLEFSER Unmodified 866.4134 0.41339662 424 B3KY43;Q6DHZ2;A0A024R712;P31323;Q75MP1 PRKAR2B cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 2.5 0.5 1 1 42.147 42.218 2 0.011694 10830 20230619_1881_Aki_TMTPro18x_K_F2 116.3 56.005 130710 109590 122820 134200 181300 183500 144300 167930 185940 149990 194630 209140 176880 169230 186030 184780 224210 219060 120820 100530 126330 134140 182660 181480 148980 172070 187280 154390 198620 208290 181700 176620 191100 187370 214120 207720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156410000 24924 424 23391 46837;46838 37726 37726 1 9606 Homo sapiens -0.025153539246616674 SLEGDLEDLK Unmodified 1117.5503 0.55028404 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98 LMNB1 Lamin-B1 yes no 0 0 0 1.8 0.748 2 2 1 58.376 58.387 2;3 1.6006E-06 17835 20230619_1880_Aki_TMTPro18x_K_F1 195.79 118.89 411900 327770 314070 395840 290390 500590 288990 321090 516470 519510 521510 761310 766280 738160 399520 1321900 532770 1193100 380060 300690 327450 395250 305690 493720 298650 345840 513850 522170 546600 761970 757640 792240 425550 1308600 513030 1132100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1139700000 24925 3482 23392 46839;46840;46841;46842;46843 37727;37728;37729 37727 3 9606 Homo sapiens -0.0037890955563852913 SLEGEAAALR Unmodified 1015.5298 0.52982336 3438 P12036-2;P12036 NEFH Neurofilament heavy polypeptide yes no 0 0 0 3 0 1 44.754 44.827 2 0.0058237 11821 20230619_1882_Aki_TMTPro18x_K_F3 88.392 52.265 278840 215900 271280 202710 145010 185190 193580 183560 200960 318020 318940 324610 369540 290170 336870 388460 379700 410320 257690 197650 273850 205930 162130 188720 192940 191290 209490 314190 323960 328100 373810 305820 345780 389820 363100 389380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 291420000 24926 3438 23393 46844 37730 37730 1 9606 Homo sapiens 0.022679645752305078 SLEGGFK Unmodified 736.37555 0.37555455 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67;Q7Z3K3-3;B4DSK8 POGZ Pogo transposable element with ZNF domain yes no 0 0 0 6 0.816 1 1 1 46.396 46.479 2 0.049448 12317 20230619_1886_Aki_TMTPro18x_K_F6 86.472 31.686 352270 254480 313920 335140 404060 408130 405460 420550 501690 419590 450510 449280 481700 396260 396850 451390 522630 470290 325210 233760 323550 332780 412530 407470 411630 428610 503430 425140 465890 453010 486660 413500 412240 453650 498470 446680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 185200000 24927 4164 23394 46845;46846;46847 37731 37731 1 9606 Homo sapiens -0.003178201194828034 SLEGVQDELDTLAHALSAIG Unmodified 2038.0219 0.021864239 3395 P07101-3;P07101-4;P07101-2;P07101;P07101-6;P07101-5 TH Tyrosine 3-monooxygenase yes no 0 0 0 5 0 1 68.447 68.49 3 0.0080362 21552 20230619_1885_Aki_TMTPro18x_K_F5 60.034 51.54 2084.9 1885 1925.1 3670.4 2078 1728.4 1646.9 2538.9 2217.7 2246.5 1903.8 1985.4 2776.7 2546.6 2474.3 3669.7 2453.1 2194 1927.9 1738.9 1980.1 3529.4 2131.9 1912.8 1706.3 2531 2217.5 2277.6 2007.1 2050.2 2793.4 2664.7 2526.8 3583.8 2345.5 2100.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3880400 24928 3395 23395 46848 37732 37732 1 9606 Homo sapiens 0.044374181650255196 SLEISQSYTTTQR Unmodified 1512.742 0.74200098 236 A0A024R3C7;Q13315;E9PIN0;A0A6Q8PH76 ATM Serine-protein kinase ATM yes no 0 0 0 6 0 1 44.984 45.073 2 0.0095919 11728 20230619_1886_Aki_TMTPro18x_K_F6 90.434 67.198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24929 236 23396 46849 37733 37733 1 9606 Homo sapiens 0.006139664046941107 SLENAIEWSVK Unmodified 1274.6507 0.65066678 1224 A0A140VK39;Q9Y570;Q9Y570-4;Q9Y570-2 PPME1 Protein phosphatase methylesterase 1 yes no 0 0 0 6.5 0.5 1 1 61.51 61.549 3 0.00025771 18464 20230619_1887_Aki_TMTPro18x_K_F7 106.29 88.153 433960 303520 361420 481160 363920 492590 453760 460620 554770 545210 453700 509730 571720 490690 538400 599600 536780 646070 400350 279450 374080 471030 381260 496030 455330 475070 555760 545510 475900 518260 578240 512690 548350 603180 514360 612750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 687010000 24930 1224 23397 46850;46851 37734;37735 37735 2 9606 Homo sapiens 0.024327474980282204 SLENETLNK Unmodified 1046.5244 0.52440364 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 0 4 0 1 44.721 44.765 2 1.084E-05 11624 20230619_1883_Aki_TMTPro18x_K_F4 195.48 106.13 52798 40085 46111 56429 44673 69426 44680 52140 79603 82714 76086 121010 120680 105170 60846 164320 167520 202900 48747 36840 47454 55767 46771 68757 46150 55278 79069 83148 80396 120550 119080 112160 69393 165960 159500 192170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25485000 24931 2578 23398 46852 37736 37736 1 9606 Homo sapiens 0.0030024099276033667 SLENLNSGTVEPTHSK Unmodified 1711.8377 0.83769228 3879 Q14191 WRN Werner syndrome ATP-dependent helicase yes yes 0 0 0 5 0 1 42.768 42.85 3 0.00026443 10705 20230619_1885_Aki_TMTPro18x_K_F5 89.866 71.033 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24932 3879 23399 46853 37737 37737 1 9606 Homo sapiens 0.010246945249264172 SLEQLQK Unmodified 844.46543 0.46543219 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;K4DIE0;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 6.5 0.5 2 2 45.576 45.663 2;3 0.0020021 11983 20230619_1886_Aki_TMTPro18x_K_F6 117.62 34.006 350540 257270 339110 366220 429180 452930 418950 397560 538560 410090 506490 500710 506140 405390 434330 418020 556880 489920 323840 236510 346940 361860 438430 450090 426570 410390 540100 416840 521000 500930 513110 422150 449540 424000 531170 464820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 517150000 24933 349;3906 23400 46854;46855;46856;46857 37738;37739 37738 2 9606 Homo sapiens 0.03697809489085557 SLEQNIQLPAALLSR Unmodified 1651.9257 0.92571943 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 2 0 1 62.328 62.338 3 1.2389E-11 19656 20230619_1881_Aki_TMTPro18x_K_F2 168.45 143.62 842060 770340 889760 1030400 970570 1081900 984170 1009500 976980 1175100 1279800 1355500 1203500 1180900 1294000 1308000 1353300 1514900 779570 707080 901950 1019500 1001800 1088300 991870 1040900 1008600 1183800 1296400 1361700 1236000 1230100 1317600 1324000 1295300 1436100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 241170000 24934 1091 23401 46858 37740;37741 37740 2 9606 Homo sapiens 0.12583359906261649 SLESALK Unmodified 746.41742 0.41741937 1945 A4D275;O15143 ARPC1B Actin-related protein 2/3 complex subunit 1B yes no 0 0 0 7 0 1 47.637 47.725 2 0.013784 12529 20230619_1887_Aki_TMTPro18x_K_F7 120.49 5.7675 192200 163590 194570 167860 148310 170360 192660 177460 202480 248420 241890 266680 300810 213510 227380 340050 356270 274720 177780 149820 196600 169400 158920 172340 192080 182750 207540 247690 249020 268160 301510 228750 240200 335670 339060 261920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75128000 24935 1945 23402 46859 37742 37742 1 9606 Homo sapiens 0.03406735569046759 SLESINSR Unmodified 904.46141 0.46140945 568 A0A024R9D3;P62888;E5RI99;A0A0C4DH44;E5RJH3 RPL30 60S ribosomal protein L30 yes no 0 0 0 5 0.816 1 1 1 37.861 37.931 2 0.0011381 8620 20230619_1885_Aki_TMTPro18x_K_F5 164.77 118.01 520820 371920 473350 503160 597110 566030 566160 565950 728100 579800 652560 646790 720500 591530 586720 545390 838330 671650 480840 341740 486720 498120 609240 567750 577550 578550 729210 587610 675850 651530 726970 609850 612500 556110 798520 637210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2606800000 24936 568 23403 46860;46861;46862 37743;37744;37745 37744 3 9606 Homo sapiens 0.005357199953778036 SLESLDTSLFAK Unmodified 1309.6765 0.67654718 2066 B3KY12;A8K7V1;A8K566;Q12874;Q53HM6;B4DW90 SF3A3 Splicing factor 3A subunit 3 yes no 0 0 0 7 0 1 62.337 62.373 3 0.039746 18870 20230619_1887_Aki_TMTPro18x_K_F7 56.087 36.428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24937 2066 23404 46863 37746 37746 1 9606 Homo sapiens 0.034095969496547696 SLESNPEQLQAMR Oxidation (M) 1517.7144 0.71440603 1782 A0A8I5KZ07;Q5JR04;A0A8I5KXC3;Q9HCE1-2;Q9HCE1;Q9H8T8;B7Z700 MOV10 Putative helicase MOV-10 yes no 0 1 0 3 0 1 41.473 41.536 3 0.0098638 10240 20230619_1882_Aki_TMTPro18x_K_F3 64.224 46.088 24380 18365 21873 20321 30096 28627 30720 28219 40818 24295 27323 28618 30640 25041 27144 27052 34465 30888 22513 16837 22541 20483 30612 28323 31222 28749 40422 24931 28820 28738 31008 26063 28063 27369 32880 29310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31192000 24938 1782 23405 46864 37747 37747 1152 1 9606 Homo sapiens -0.023742601272033426 SLESNPEQLQAMR Unmodified 1501.7195 0.7194914 1782 A0A8I5KZ07;Q5JR04;A0A8I5KXC3;Q9HCE1-2;Q9HCE1;Q9H8T8;B7Z700 MOV10 Putative helicase MOV-10 yes no 0 0 0 4 0 1 46.386 46.429 2 2.8402E-07 12370 20230619_1883_Aki_TMTPro18x_K_F4 149.96 112.4 23396 16322 18121 21762 26960 32663 30409 32782 39159 23216 22641 28807 31727 24116 28180 31018 25621 27424 21573 14997 19013 21666 27445 32183 30705 33206 38699 24172 24450 28832 31908 25398 28593 30852 24551 26079 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31817000 24939 1782 23405 46865 37748 37748 1 9606 Homo sapiens -0.011299562645717742 SLESQVENLQK Unmodified 1273.6514 0.65139506 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 4.33 0.471 2 1 51.084 51.137 2;3 7.6704E-07 14210 20230619_1885_Aki_TMTPro18x_K_F5 163.9 126.55 65716 47795 62754 67643 62668 78092 67976 65356 87463 80285 73926 71625 92422 76373 76157 92861 84485 88976 60701 43936 64032 66786 65352 77843 68827 68051 87484 80129 77268 73296 92963 79515 78280 92786 80785 84534 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 444900000 24940 3440 23406 46866;46867;46868 37749;37750 37750 2 9606 Homo sapiens 0.025515421471027366 SLESTTLTEK Unmodified 1107.5659 0.5659341 659 A0A024RBB5;F8VW96;Q16527;F8VQR7 CSRP2 Cysteine and glycine-rich protein 2 yes no 0 0 0 4 0 1 46.645 46.688 2 1.0396E-09 12493 20230619_1883_Aki_TMTPro18x_K_F4 234.71 182.85 47400 38886 40586 44434 57069 68295 45465 44693 55213 49980 54454 48546 56806 49550 40281 58651 57445 53509 43778 35650 42066 44712 57741 66701 46816 47420 55675 50231 55943 49424 57141 51550 42299 58454 54770 50892 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33318000 24941 659 23407 46869 37751 37751 1 9606 Homo sapiens 0.016453769614372504 SLETCMYDHK Oxidation (M) 1298.5271 0.52712253 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 0 4 0 1 38.798 38.84 3 0.00027051 9112 20230619_1883_Aki_TMTPro18x_K_F4 110.18 95.489 75997 54130 70652 70894 85443 82377 86606 76944 87472 88370 104890 99030 91655 78115 94677 109070 111420 111460 70174 49722 72429 70368 87510 82332 87275 79313 89745 89012 106200 99404 94121 82900 97227 109190 106450 105840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91531000 24942 3881 23408 46870 37752 37752 2560 1 9606 Homo sapiens -0.11019994936259536 SLETCMYDHK Unmodified 1282.5322 0.5322079 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4.5 0.5 1 1 43.393 43.437 3 3.0457E-07 11020 20230619_1883_Aki_TMTPro18x_K_F4 163.84 145.5 127680 104530 130340 127020 122960 144150 151680 149720 154890 161170 169020 168700 172990 143010 155260 183090 191340 180570 118080 95893 132080 126700 129090 144570 151400 152850 158200 162460 172920 170090 175590 150500 160330 183120 182650 171570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155260000 24943 3881 23408 46871;46872 37753;37754 37753 2 9606 Homo sapiens -0.09775691073627968 SLETEHK Unmodified 842.4134 0.41339662 3384 P04843;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 3 0 1 33.223 33.294 3 0.023067 6910 20230619_1882_Aki_TMTPro18x_K_F3 69.423 4.3856 37879 22114 50424 56234 79717 66611 60411 79873 63101 39535 77629 81250 50715 55490 70383 45870 83244 68481 35059 20536 50628 54065 79755 66845 62175 79557 64570 43366 77841 79732 53642 57516 71790 47605 79420 64858 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36914000 24944 3384 23409 46873 37755 37755 1 9606 Homo sapiens -0.01411353924663672 SLETEILESLK Unmodified 1260.6813 0.68129821 2830 D3DVC4;P48681 NES Nestin yes no 0 0 0 4 0 1 63.897 63.905 3 0.00029206 19980 20230619_1883_Aki_TMTPro18x_K_F4 103.34 78.96 10662 11478 11670 11728 11076 11204 15931 14254 16285 15727 15790 14315 17655 11138 18327 18540 17730 15194 9886.2 10503 11765 11829 11666 11449 15786 14393 16549 15768 16302 14502 17965 11999 18592 18323 16952 14476 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19378000 24945 2830 23410 46874 37756 37756 1 9606 Homo sapiens 0.06138481092420989 SLETENAGLR Unmodified 1088.5462 0.54620171 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;Q8N519;A0A6Q8PF80;A0A6Q8PGH0;A0A6Q8PF59;A0A6Q8PFM1;W5X314 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 2.5 0.5 1 1 39.314 39.375 2 7.2444E-06 9318 20230619_1882_Aki_TMTPro18x_K_F3 179.37 151.15 1066800 765090 844490 1122800 1683700 1797600 1672300 1682900 2167200 1457400 1609200 1756700 1689400 1400500 1514200 1787800 1785300 1678800 983970 703660 891090 1112400 1682900 1763200 1700300 1720300 2155500 1495400 1681600 1758000 1713700 1476600 1559200 1783600 1704800 1596100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3368999999.9999995 24946 1428 23411 46875;46876 37757;37758 37758 2 9606 Homo sapiens 0.005470457413366603 SLETENSALQLQVTER Unmodified 1816.9167 0.91667089 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 LMNB1 Lamin-B1 yes no 0 0 0 4 0 1 51.901 51.929 2 1.7478E-10 14850 20230619_1883_Aki_TMTPro18x_K_F4 182.33 158.3 16638 15073 15304 16260 15618 22552 15113 14439 15571 20257 19005 21260 21483 19793 20603 21129 22606 25059 15385 13807 15672 16403 16230 22134 15290 15468 16003 20192 19466 21474 21815 20536 21080 21430 21627 23751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150360000 24947 3482 23412 46877 37759 37759 1 9606 Homo sapiens 0.04088921759193909 SLETENSALQLQVTEREEVR Unmodified 2330.1714 0.17138202 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98;A0A0D9SFY5 LMNB1 Lamin-B1 yes no 0 0 1 2.5 0.5 1 1 49.488 49.547 3 1.2195999999999999E-79 14220 20230619_1881_Aki_TMTPro18x_K_F2 320.88 277.51 96559 77265 85298 87557 83409 86766 71213 74808 75240 99591 105480 95121 104060 92091 96903 107100 107500 117330 89187 70837 87535 87589 86454 87577 72732 77925 77750 99157 106670 96703 105920 95903 99309 107930 102820 111300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175180000 24948 3482 23413 46878;46879 37760;37761 37760 2 9606 Homo sapiens 0.059503187168957083 SLETSLVPLSDPK Unmodified 1384.745 0.7449611 3624 V9HWE7;P51570;Q6ZP37;Q71UH7;C8CHJ6 HEL-S-19;GALK1;GALK Galactokinase yes no 0 0 0 6 0 1 58.479 58.544 3 4.4256E-05 17564 20230619_1886_Aki_TMTPro18x_K_F6 113.24 73.455 63032 54897 64100 72533 75156 90654 77330 73479 86253 83338 94695 96802 88814 85899 96219 100990 96163 111180 58315 50391 65258 72003 77309 89870 78119 76532 87688 84131 96543 97310 91249 89725 97743 101800 92113 105440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112670000 24949 3624 23414 46880 37762 37762 1 9606 Homo sapiens 0.06797841529510151 SLETVYLER Unmodified 1108.5764 0.57643921 1237 A0A140VK83;Q15435;C9J177;Q15435-2;H7C003;H7C3Q5 PPP1R7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 0 4 0 1 50.261 50.293 2 0.00058056 14129 20230619_1883_Aki_TMTPro18x_K_F4 130.75 67.183 346550 260820 301510 376370 311560 333850 369180 353330 360580 446950 466730 506570 531190 438060 399470 509940 542520 623470 319940 239780 310640 369860 324290 341220 368700 362300 372460 448270 476850 509100 533800 458180 417040 517260 518260 590670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278090000 24950 1237 23415 46881 37763 37763 1 9606 Homo sapiens 0.026494044065202615 SLEVILR Unmodified 828.5069 0.50690308 3892 Q4ZG57;Q14566 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 7.5 0.5 1 1 52.587 52.661 2 0.039915 14780 20230619_1887_Aki_TMTPro18x_K_F7 90.777 19.481 322140 264700 302300 320820 261920 322720 310000 306150 323850 388000 376250 341150 387580 337310 315310 392550 376090 372370 297730 242810 308270 319440 276830 325780 310370 316130 331540 386240 383760 348410 391830 350990 325680 392260 359230 353910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 747740000 24951 3892 23416 46882;46883 37764 37764 1 9606 Homo sapiens 0.08578990248429363 SLFDQAESSYR Unmodified 1301.5888 0.58879481 2288 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;A0A8C8L741;E9PQR8;E9PN56;E9PRL0;E9PN71;E9PJV8;E9PPY1;E9PNC8;E9PKH7 EEF1D Elongation factor 1-delta yes no 0 0 0 4 0 1 50.529 50.561 2 2.1294E-08 14236 20230619_1883_Aki_TMTPro18x_K_F4 199.68 189.44 241480 215480 222510 259050 97551 105340 133430 151850 163410 223300 235960 226500 249280 213090 244360 268420 272970 288430 223270 197590 225850 256080 112270 119390 133760 154060 167870 221800 239220 229430 253760 223230 250280 269880 261010 273680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171960000 24952 2288 23417 46884 37765 37765 1 9606 Homo sapiens -0.04993603921116119 SLFGSIGDIESCK Unmodified 1411.6653 0.66533057 3893 Q96J71;Q14576;Q14576-2;K7EPB5 ELAVL3 ELAV-like protein;ELAV-like protein 3 yes no 0 0 0 6.5 0.5 1 1 61.638 61.685 3 0.017808 18854 20230619_1886_Aki_TMTPro18x_K_F6 60.345 42.644 208140 178940 207040 194720 180530 165670 181020 211960 206570 212570 207870 182130 209430 195500 202170 236940 218960 239640 192520 163950 209850 195170 189390 170960 183500 213280 209150 213820 213130 186910 213490 203390 206840 237480 209480 227510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 366350000 24953 3893 23418 46885;46886 37766;37767 37766 2 9606 Homo sapiens -0.02403548416123158 SLFGSIGEIESCK Unmodified 1425.681 0.68098063 1058;945 P26378-4;A0A494C0F8;P26378;P26378-3;P26378-1;P26378-5;P26378-2;A0A494C147;B1APY9;A0A494C1D9;A0A0R4J2E6;B7Z5E0;A0A494C015;A0A494C173;A0A494C0Q5;A0A494C011;A0A494C0M6;A0A494BZW4;A0A0A0MRX1;Q12926-2;Q12926;B1AM48 ELAVL4;ELAVL2 ELAV-like protein 4;ELAV-like protein;ELAV-like protein 2 no no 0 0 0 6.67 0.471 1 2 61.769 61.814 2;3 3.7809E-08 18572 20230619_1887_Aki_TMTPro18x_K_F7 160.56 133.96 1135500 1017000 1059000 1495600 1029400 1175700 1157000 1102000 1087400 1316700 1327300 1329900 1455800 1180100 1396500 1579500 1399700 1615400 1050000 934610 1084300 1465600 1075100 1211100 1157500 1137800 1122500 1319100 1356500 1344800 1478300 1243800 1422400 1582100 1340700 1533100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1681599999.9999998 24954 1058;945 23419 46887;46888;46889 37768;37769 37768 2 9606 Homo sapiens -0.0148326189907948 SLFLGQK Unmodified 791.45414 0.45413923 3298 O75367;O75367-3;O75367-1;A0A8I5KRC6;A0A8I5KS04;A0A994J4J7 H2AFY Core histone macro-H2A.1 yes no 0 0 0 3.5 0.5 1 1 52.594 52.618 3 0.0028526 15332 20230619_1882_Aki_TMTPro18x_K_F3 104.11 53.145 77407 68183 71314 78189 78796 94496 82672 83093 88891 66011 64908 56710 68472 51399 72082 79565 67891 59698 71564 62495 73114 78357 81431 94044 83318 85214 89199 67392 67852 57903 69905 54693 73043 78370 64941 56942 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19443000 24955 3298 23420 46890;46891 37770;37771 37770 2 9606 Homo sapiens 0.050070321856082955 SLFNNAER Unmodified 949.46174 0.4617438 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8 XPO7 Exportin-7 yes no 0 0 0 6 0 1 41.653 41.748 2 0.0043355 10251 20230619_1886_Aki_TMTPro18x_K_F6 105.1 77.964 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24956 2083 23421 46892 37772 37772 1 9606 Homo sapiens -0.01500860284772898 SLFNYHDTR Unmodified 1151.536 0.53597137 1492 D6RGI3;A0A384P5S0;D6RER5;Q9NVA2;Q9NVA2-2;D6RDU5 SEPT11 Septin-11 yes no 0 0 0 7.5 0.5 1 1 41.09 41.12 3 6.6437E-05 9925 20230619_1888_Aki_TMTPro18x_K_F8 128.81 85.041 34739 32215 37698 38393 40527 42854 42116 40366 42970 35349 38807 37789 40327 31154 38518 39689 44291 43838 32172 29533 38094 38330 41882 42947 42402 41286 43543 36077 40079 38045 41010 32828 39523 39974 42319 41596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55827000 24957 1492 23422 46893;46894 37773 37773 1 9606 Homo sapiens -0.03373517193267617 SLFPEGNPAK Unmodified 1058.5397 0.53965977 2174 E9PDF6;B0I1S9;O43795-2;O43795 MYO1B Unconventional myosin-Ib yes no 0 0 0 7 0 1 50.645 50.726 2 0.00044724 13898 20230619_1887_Aki_TMTPro18x_K_F7 150.53 103.54 192090 161820 198180 220660 194500 238710 229270 221730 245110 245980 232570 224580 272870 214790 221730 259510 243860 254530 177700 148610 200940 218180 203410 239530 229640 228370 248420 246670 240890 228680 274670 224360 227800 259690 233190 241760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 130460000 24958 2174 23423 46895 37774;37775 37775 2 9606 Homo sapiens 0.012731525806202626 SLFSNVVTK Unmodified 993.5495 0.54949617 3534;2560 B4DP06;H7C1S2;V9HWH7;P31939;B2R7P8;P31939-2 ATIC;HEL-S-70p Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 0 3.5 0.5 2 2 55.395 55.421 2;3 8.6992E-05 16372 20230619_1883_Aki_TMTPro18x_K_F4 140.45 126.94 296060 242720 262070 279610 247640 295750 289540 279140 293630 328490 328630 335310 398220 296820 338860 394220 363740 382410 273500 222540 268960 279610 259700 297470 289720 287690 300550 329470 338630 338870 401100 312780 347300 393750 347920 363270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 698840000 24959 2560;3534 23424 46896;46897;46898;46899 37776;37777 37777 2 9606 Homo sapiens 0.05246340585995313 SLFTDVVAEK Unmodified 1107.5812 0.58119023 2768 CON__ENSEMBL:ENSBTAP00000024146 yes yes 0 0 0 6 0.707 1 2 1 59.421 59.477 2;3 0.00031777 17918 20230619_1886_Aki_TMTPro18x_K_F6 150.35 97.77 + 82812 97996 108460 89285 226210 306370 189070 172990 283140 80125 110020 141150 75710 85660 138330 75682 106350 171540 76984 89568 109830 93687 225210 290090 195370 183320 275510 88326 119830 138550 81545 89676 137480 81750 102510 161680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97613000 24960 2768 23425 46900;46901;46902;46903 37778;37779 37779 2 9606 Homo sapiens 0.031702885492677524 SLFVGHMDYK Unmodified 1195.5696 0.56957969 2806 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;Q9BZE4-2;B4DHR2;Q9BZE4-3;O60747 GTPBP4 Nucleolar GTP-binding protein 1 yes no 0 0 0 1 0 1 50.52 50.52 3 0.0001339 14588 20230619_1880_Aki_TMTPro18x_K_F1 123.8 85.167 45678 40079 49436 50506 32532 43358 46518 52236 49131 46758 42902 47770 45651 41833 47405 53355 55096 54223 42285 36770 49666 50073 35547 44569 46213 52602 49656 47563 44481 48248 46624 43946 48630 53462 52635 51495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46632000 24961 2806 23426 46904 37780 37780 1 9606 Homo sapiens -0.02038231745700614 SLGAEPLEVDLK Unmodified 1269.6816 0.68163256 87 Q2TB59;A0A024R0C3;Q13423;A0A590UJM2;A0A590UK29;E9PCX7;A0A590UK15;A0A590UJI3 NNT NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 4.33 0.471 2 1 58.503 58.523 2;3 1.0634E-06 17725 20230619_1883_Aki_TMTPro18x_K_F4 192.44 140.45 115240 102390 113060 121590 106140 140950 136500 132860 146680 136370 153380 132350 159390 132190 147220 153060 129170 142600 106600 93878 115020 121480 111790 140820 136190 136380 149060 137550 157190 134660 161830 137480 148960 152900 123850 135500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155500000 24962 87 23427 46905;46906;46907 37781;37782 37781 2 9606 Homo sapiens 0.05757900812272965 SLGAWNLENLR Unmodified 1271.6622 0.66223452 2830 D3DVC4;P48681 NES Nestin yes no 0 0 0 1.67 0.471 1 2 59.503 59.509 2;3 1.7671E-06 18282 20230619_1880_Aki_TMTPro18x_K_F1 176.65 105.8 69193 59630 60629 69239 63711 87635 110080 109570 115280 100020 70086 65424 103730 66619 87569 104710 94914 77491 63937 54666 62469 69409 67303 87665 108360 110090 115360 100550 75496 68085 103920 70789 89820 103030 90622 73954 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180990000 24963 2830 23428 46908;46909;46910 37783;37784 37783 2 9606 Homo sapiens 0.03726989312031037 SLGEISALTSK Unmodified 1104.6027 0.60265396 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9 VCL;HEL114 Vinculin yes no 0 0 0 1 0 1 56.834 56.834 3 0.00051006 17214 20230619_1880_Aki_TMTPro18x_K_F1 95.618 66.891 33533 25805 28596 32185 32378 39350 37784 37532 45172 40746 40704 40543 43055 38136 35887 48047 46984 45653 30958 23683 29547 32069 33526 39194 38001 38546 45415 41015 42068 41102 43552 39933 37298 47953 44838 43392 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23428000 24964 51 23429 46911 37785 37785 1 9606 Homo sapiens 0.054536735779947776 SLGLSDEEIVK Unmodified 1188.6238 0.62378333 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRU9;Q6NVI4 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 3 0.816 1 1 1 54.075 54.108 3 2.8337E-06 15976 20230619_1882_Aki_TMTPro18x_K_F3 147.37 104.65 236190 175660 201600 218140 205990 227470 214990 226530 242380 261830 268150 272130 300520 245320 264020 303470 294670 310860 218010 161230 207810 216940 213980 229300 217210 232420 246560 262990 275350 274940 303890 257080 271020 304320 281750 295120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 395420000 24965 1603 23430 46912;46913;46914 37786 37786 1 9606 Homo sapiens 0.0370163888683237 SLGNILQAKPTSSPAK Unmodified 1610.8992 0.89917033 1505 Q13428-4;A0A3B3IS06;Q13428-3;Q13428;Q13428-7;Q13428-6;Q13428-8;Q13428-2;E7ETY2;A0A6I8PRA0;B4DRA2;Q13428-5;H0Y8Y7;Q59FZ2;B4DLB1 TCOF1 Treacle protein yes no 0 0 1 5 0 1 51.379 51.454 3 0.032194 14375 20230619_1885_Aki_TMTPro18x_K_F5 56.215 38.078 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24966 1505 23431 46915 37787 37787 1 9606 Homo sapiens 0.1181567101489236 SLGPGAGPR Unmodified 810.4348 0.43480077 2565 H3BUV2;B4DPA0;E5KTI5;P78549-3;P78549-2;P78549 NTHL1 Endonuclease III-like protein 1 yes no 0 0 0 7.5 0.5 1 1 33.895 33.934 2 0.0020723 7084 20230619_1888_Aki_TMTPro18x_K_F8 109.86 69.177 54699 38779 56948 63458 64874 61357 68095 67566 90237 54324 68105 68502 61953 55554 71586 55979 80574 66668 50553 35716 57813 62000 66789 62337 69133 68265 89647 56101 70670 68465 63926 57747 73024 56903 76910 63259 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23019000 24967 2565 23432 46916;46917 37788;37789 37789 2 9606 Homo sapiens 0.022000758947115173 SLGPPQGEEDSVPR Unmodified 1466.7001 0.70013617 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2 0.816 1 1 1 42.455 42.504 2 5.6556E-22 11190 20230619_1880_Aki_TMTPro18x_K_F1 235.31 177.45 141040 109780 137890 150120 146350 170070 171600 152410 185380 181500 184800 191500 213280 166150 169610 203310 207120 199560 130350 100850 140570 148500 152080 170010 171940 157770 188090 182210 190890 193090 214620 174250 175490 203410 197750 189610 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 305690000 24968 3758 23433 46918;46919;46920 37790;37791;37792 37790 3 9606 Homo sapiens -0.014545892838214058 SLGPSLATDKS Unmodified 1074.5557 0.55570376 4510 Q9H3N1;B4DZX7 TMX1;TXNDC Thioredoxin-related transmembrane protein 1 yes no 0 0 1 6.5 0.5 1 1 47.104 47.185 2;3 0.00017644 12687 20230619_1886_Aki_TMTPro18x_K_F6 156.16 112.88 47487 42934 46905 49317 49904 56258 54546 50167 60917 67835 77793 74198 79060 60602 67389 89079 83688 80053 43934 39350 47760 49378 51735 56234 54932 52157 62391 67793 79039 74627 80057 64477 69751 88484 79889 76143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21122000 24969 4510 23434 46921;46922 37793;37794 37793 2 9606 Homo sapiens 0.021408140268476927 SLGSKMKFLQK Oxidation (M) 1281.7115 0.7114929 4091 Q68D51-2;Q68D51-3;Q68D51 DENND2C DENN domain-containing protein 2C yes no 0 1 2 5.5 0.5 1 1 36.691 36.77 5 0.047354 8211 20230619_1886_Aki_TMTPro18x_K_F6 45.879 21.689 117470 88233 104610 98258 108800 121370 82733 94993 101980 136210 142200 140210 133730 113390 126660 144660 146780 135950 108470 80900 107320 98741 112070 120410 85666 99927 104580 135520 143610 141240 136410 119490 130130 144340 140170 129260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176820000 24970 4091 23435 46923;46924 37795 37795 2667 1 9606 Homo sapiens 0.08190561276614972 SLGSSDLKF Unmodified 952.48656 0.48656157 1183 A0A140VJL0;Q6NVY1;B9A058;H7C126 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes no 0 0 1 7 0 1 54.434 54.498 3 0.004791 15552 20230619_1887_Aki_TMTPro18x_K_F7 63.534 48.669 30614 21053 27845 27326 29458 32599 36508 33228 38912 32245 32987 32961 37269 29716 32735 37925 36443 32426 28259 19340 28543 27155 30662 32573 36459 33879 39252 32675 34313 33333 37678 31193 33598 37659 34805 30872 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53835000 24971 1183 23436 46925 37796 37796 1 9606 Homo sapiens 0.008417747979478918 SLGTADVHFER Unmodified 1230.5993 0.59929991 4189 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 0 0 5.5 2.06 1 1 1 1 41.657 41.7 3 4.1161E-31 10240 20230619_1883_Aki_TMTPro18x_K_F4 240.85 190.65 452690 338600 363990 435520 407180 473750 488510 452340 512300 478100 501480 456680 530480 451930 453050 592730 506650 466080 417680 310900 378300 432250 422060 475570 488410 464390 520050 481290 515970 464880 536860 473590 465790 585920 483960 444180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4046499999.9999995 24972 4189 23437 46926;46927;46928;46929 37797;37798;37799 37798 3 9606 Homo sapiens -0.006775764760050151 SLGTDLMNEMR Unmodified 1265.5744 0.57440707 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3;P05556-3;P05556-5;P05556-2;P05556-4;C9JPK5;A0A7I2V348;A0A7I2V5T3;A0A7I2V5Z8 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 0 4.5 0.5 1 1 56.083 56.12 2 5.6981E-12 16298 20230619_1885_Aki_TMTPro18x_K_F5 204.64 166.55 124630 98267 117750 125110 108140 145030 139000 140600 140980 139580 146250 145940 148970 123600 156440 150040 150030 171960 115160 90199 120130 124400 114100 144960 138450 143910 143720 141300 149970 147130 152270 129690 158570 151600 143760 163010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 140650000 24973 1647 23438 46930;46931 37800;37801 37801 2 9606 Homo sapiens -0.04775715665232383 SLGTIQQCCDAIDHLCR Unmodified 2045.9081 0.90811358 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 6.5 0.5 1 1 50.647 50.726 3 1.446E-59 14188 20230619_1886_Aki_TMTPro18x_K_F6 303.96 287.27 340630 265290 295030 306620 271300 300340 344710 327560 325020 378420 322690 296240 420900 312560 284260 479130 399440 430850 314530 243290 303230 306310 285640 304880 342730 334120 332580 377110 335210 305390 419780 330930 298910 475440 381280 409620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2689300000 24974 3758 23439 46932;46933 37802;37803 37802 2 9606 Homo sapiens -0.07300414744872796 SLGTQPPK Unmodified 826.45487 0.45486751 3905 Q14978-3;B2RAU8;A0A0A0MRM9;Q14978;Q14978-2;Q96J17;S4R349 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 0 0 0 8 0 1 39.569 39.558 2 0.0025266 9279 20230619_1888_Aki_TMTPro18x_K_F8 125.31 68.773 107030 61262 121820 126850 155690 192240 123630 162330 145390 110460 165120 193780 171620 159310 158510 85154 208360 200840 98900 56680 123070 123430 158330 188530 127340 166400 147540 116990 168960 191570 174440 161610 163720 93498 198820 189560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72589000 24975 3905 23440 46934 37804 37804 1 9606 Homo sapiens 0.03469826834657397 SLGVDSQIK Unmodified 945.51311 0.51311067 4702 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 6 0 1 46.434 46.517 2 0.040986 12358 20230619_1886_Aki_TMTPro18x_K_F6 73.985 28.267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24976 4702 23441 46935 37805 37805 1 9606 Homo sapiens 0.038174636892904346 SLGVSNFNR Unmodified 992.50394 0.50394297 3628 Q96LK9;P51857-2;P51857 AKR1D1 3-oxo-5-beta-steroid 4-dehydrogenase yes no 0 0 0 1.5 0.5 1 1 42.443 42.482 2 0.00070722 11202 20230619_1880_Aki_TMTPro18x_K_F1 126.24 0 104120 64388 95822 119220 247130 311120 375250 388480 616460 77924 92088 102420 101500 83396 136220 90170 115900 99857 96067 59443 100760 118360 248850 301380 377410 382810 591410 97118 119670 102470 105200 87018 136520 91205 110970 94801 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 438850000 24977 3628 23442 46936;46937 37806 37806 1 9606 Homo sapiens 0.007391151236220139 SLGVTQLAVAVNK Unmodified 1298.7558 0.75580056 2136 Q9Y450;Q9Y450-4;B3KNB9;A8K9E1;D9YZV0;B7Z524;J3QT46;H0YES5;H0YDX7;B7Z1K2;E9PHZ9 HBS1L HBS1-like protein yes no 0 0 0 3 0 1 57.548 57.581 3 0.005565 17426 20230619_1882_Aki_TMTPro18x_K_F3 73.881 52.418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24978 2136 23443 46938 37807 37807 1 9606 Homo sapiens 0.11837288694459858 SLGYAYVNFQQPADAER Unmodified 1927.9064 0.90644055 566;1667 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2YQ90;A0A024R9E2;H0YBN4;E5RJB9;E5RGH3;E5RH24;E5RHG7;Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;B1ANR1 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 4 no no 0 0 0 6 0.816 1 1 1 55.948 56.013 3 5.159E-31 16145 20230619_1887_Aki_TMTPro18x_K_F7 241.14 222.35 244370 207680 249940 247960 233080 267800 260130 285000 282550 272740 307940 246070 280480 257890 276730 310680 333450 307820 226060 190450 253180 247470 244220 269680 261590 289530 287500 275500 313160 251790 287140 268380 284780 311100 318320 292490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2257600000 24979 566;1667 23444 46939;46940;46941 37808;37809;37810 37810 3 9606 Homo sapiens -0.02039641175338147 SLHDAIMIVR Oxidation (M) 1169.6227 0.62267789 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 1 0 4.5 3.5 1 1 44.98 44.994 3 0.00015991 11469 20230619_1888_Aki_TMTPro18x_K_F8 118.03 87.848 61625 45574 64444 79751 75519 64545 74975 72532 65776 82111 80324 92139 85914 67331 78038 79050 86409 91381 56970 42005 65466 77470 77353 66615 75365 73850 68214 82704 82066 92168 87089 70932 79960 79939 82629 86645 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94117000 24980 4005 23445 46942;46943 37811;37812 37812 2642 2 9606 Homo sapiens 0.04465146036955048 SLHDALCVIR Unmodified 1182.6179 0.61792687 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 4.5 3.5 1 1 46.723 46.747 3 5.5214E-09 12998 20230619_1880_Aki_TMTPro18x_K_F1 194.06 0 80846 60858 85820 96129 81442 97421 83090 91881 66744 78771 65427 83217 75653 53431 63898 79200 82240 101120 74756 56011 86761 94140 84979 98218 83257 93903 68987 80368 67774 83205 76277 57550 66284 80333 78640 95738 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 410700000 24981 2633 23446 46944;46945 37813;37814 37813 2 9606 Homo sapiens 0.03392261894191506 SLHDALCVVK Unmodified 1140.5961 0.59612879 3470 P17987;E7ERF2;E7EQR6;F5H282;F5GZ03 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 8 0 1 48.868 48.934 3 0.00046109 13036 20230619_1888_Aki_TMTPro18x_K_F8 104.22 70.813 122020 78762 122590 119930 111690 129810 120560 116720 77203 133040 113940 121650 133270 96545 113340 140120 131960 147970 112690 72504 124300 117830 117040 130160 119820 120600 82876 133090 116100 123140 134340 102830 116780 140450 126190 140400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 294460000 24982 3470 23447 46946 37815 37815 1 9606 Homo sapiens 0.0314545714563792 SLHTLFGDELCK Unmodified 1418.6864 0.68640036 2776 CON__P02769 yes yes 0 0 0 7 0 1 55.076 55.137 3 3.224E-07 15785 20230619_1887_Aki_TMTPro18x_K_F7 158.04 126.11 + 46033 60449 102000 64250 241120 288460 165750 140000 152610 81735 87561 122270 68629 68203 79214 87947 106430 195080 43154 55305 100900 67430 237380 271150 170890 151590 153530 87184 92360 120360 71292 73295 81948 93960 102180 183820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 312330000 24983 2776 23448 46947 37816 37816 1 9606 Homo sapiens -0.00619538316618673 SLIFPNFEPLHK Unmodified 1440.7765 0.776536 1390 A0A2X0TVY0;C9JME2;Q9Y4F1;Q9Y4F1-2 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 0 0 0 3 0 1 61.524 61.553 3 0.0044994 19039 20230619_1882_Aki_TMTPro18x_K_F3 79.466 57.909 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24984 1390 23449 46948 37817 37817 1 9606 Homo sapiens 0.07377879074124394 SLIGVEYKPVSATGAEDK Unmodified 1862.9626 0.96255845 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 1 6.8 0.748 2 2 1 52.591 52.665 3;4 3.5266E-30 15050 20230619_1886_Aki_TMTPro18x_K_F6 190.71 167.57 715700 573010 590920 707570 604410 738900 672370 714150 733630 895080 883700 976420 1021300 849530 846830 1110000 946400 1099800 660740 525770 611630 703810 629480 744100 676220 736080 750830 897020 906170 983210 1029500 894300 871200 1109900 905610 1044200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2049899999.9999998 24985 3402 23450 46949;46950;46951;46952;46953 37818;37819;37820;37821 37818 4 9606 Homo sapiens 0.06559566941450612 SLIINTFYSNK Unmodified 1298.6871 0.68705229 4017 Q58FF6 HSP90AB4P Putative heat shock protein HSP 90-beta 4 yes yes 0 0 0 4.5 0.5 1 1 61.242 61.269 3 1.434E-06 18419 20230619_1885_Aki_TMTPro18x_K_F5 158.56 127.13 243500 183070 239480 258760 223250 429060 250030 273690 464620 258730 227680 361690 444700 431630 312530 586840 495810 1308500 225010 168260 243700 257070 235820 416760 257040 289850 451330 266220 255030 365150 441470 452250 332050 626130 478240 1232200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 385840000 24986 4017 23451 46954;46955 37822;37823 37823 2 9606 Homo sapiens 0.04965624394776569 SLINPDR Unmodified 813.43447 0.43446642 3692 P61221;D6R9I9 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 0 0 4 0.816 1 1 1 39.403 39.466 2 0.081642 9239 20230619_1883_Aki_TMTPro18x_K_F4 72.485 30.376 102830 68918 87402 102990 116760 116120 107870 110580 142320 126790 135160 141240 158770 123890 123640 155350 153360 156110 94863 63417 90587 101320 118710 116290 110330 113780 142750 127750 140040 142160 159580 130080 128160 155550 146460 148260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 854950000 24987 3692 23452 46956;46957;46958 37824 37824 1 9606 Homo sapiens 0.020286561748548593 SLIPAEGTLSK Unmodified 1114.6234 0.6233894 1470 A0A384NL74;P42696 RBM34 RNA-binding protein 34 yes no 0 0 0 7 0 1 53.41 53.477 2 1.3755E-05 15116 20230619_1887_Aki_TMTPro18x_K_F7 149.23 105.95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24988 1470 23453 46959 37825 37825 1 9606 Homo sapiens 0.0706626395767671 SLIPSWNK Unmodified 943.51272 0.51271674 967 H3BUA6;B4E360;A0A0A0MTR2;Q8N543-2;Q8N543 OGFOD1 Prolyl 3-hydroxylase OGFOD1 yes no 0 0 0 4 0 1 57.171 57.176 2 0.0048151 17145 20230619_1883_Aki_TMTPro18x_K_F4 114.5 58.376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24989 967 23454 46960 37826 37826 1 9606 Homo sapiens 0.03870088760083945 SLISMDEINK Unmodified 1148.5747 0.57472465 268 A0A024R3V8;Q99598;C4P0D6;C4P0D8;Q7Z3N9;Q5VVQ1 TSNAX;DISC1;DKFZp686G1650 Translin-associated protein X yes no 0 0 0 6 0 1 55.874 55.949 2 1.0579E-06 16459 20230619_1886_Aki_TMTPro18x_K_F6 209.58 147.12 91161 69375 80714 100830 74119 101440 85285 90387 104240 106990 108760 117200 116110 107840 98278 134900 123610 136820 84178 63782 82902 99182 78021 102190 85968 93566 105330 107560 111730 118210 117510 112940 101860 135120 118120 129880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56249000 24990 268 23455 46961 37827 37827 1 9606 Homo sapiens 0.006380273262720948 SLIVEGK Unmodified 744.43815 0.43815481 3032 H0Y993;P35659;B4DFG0;A0A494C028;B4DNW3;A0A494C198;H0Y8X0;D6R9L5 DEK Protein DEK yes no 0 0 0 6 0.816 1 1 1 47.055 47.137 2 0.01504 12612 20230619_1886_Aki_TMTPro18x_K_F6 111.82 27.572 1039200 782800 897440 945290 1059300 1092400 1007100 990760 1248800 1187300 1385200 1207200 1368600 1099300 1113400 1353700 1477700 1280700 959340 718280 925990 943270 1086200 1091500 1026100 1024400 1263700 1190300 1412400 1221900 1385000 1151200 1158000 1351500 1409000 1217900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 647450000 24991 3032 23456 46962;46963;46964 37828;37829 37828 2 9606 Homo sapiens 0.05571325948722006 SLKDEDVLQK Unmodified 1173.6241 0.62411768 1467 B3KM97;A0A384NL45;Q9NZ01;B3KSQ1;M0R2N5 TECR Very-long-chain enoyl-CoA reductase yes no 0 0 1 5 0.816 1 1 1 47.335 47.402 3 0.00072073 12764 20230619_1883_Aki_TMTPro18x_K_F4 100.38 64.639 643610 541170 633420 649320 734500 813900 812270 783580 944520 870750 1116800 1135100 1076900 856220 1000200 946070 1046900 984900 595160 496320 646020 649120 757140 809850 818530 804960 960970 883380 1136100 1130700 1096100 897230 1020600 951790 1000800 935280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 671720000 24992 1467 23457 46965;46966;46967 37830;37831 37830 2 9606 Homo sapiens 0.0442505860669371 SLKEEEQERR Unmodified 1302.6528 0.65279205 1607 A0A6I8PRS5;Q8N954 GPATCH11 G patch domain-containing protein 11 yes no 0 0 2 2.5 0.5 1 1 31.101 31.177 4 0.00052559 6051 20230619_1882_Aki_TMTPro18x_K_F3 94.82 78.28 69141 46005 77233 78358 95785 84848 91033 86393 85271 79059 92933 65749 66692 53780 92394 28477 66649 36931 63920 42406 78047 76523 97671 85348 91893 87962 87465 79877 93711 66931 70049 54575 91710 29734 63812 35097 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34055000 24993 1607 23458 46968;46969 37832 37832 1 9606 Homo sapiens 0.013571762358424166 SLKEESVEAVK Unmodified 1217.6503 0.65033243 2830 D3DVC4;P48681 NES Nestin yes no 0 0 1 5 0 1 45.567 45.644 3 0.0030722 11919 20230619_1885_Aki_TMTPro18x_K_F5 78.529 52.663 129770 124800 155350 126370 217240 154150 248050 199000 148940 215910 210420 79608 112550 51850 252130 50207 52114 21240 120320 114230 156410 128070 220500 155090 245130 200590 160000 212890 208140 86211 124000 54612 241770 49547 51583 20594 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90806000 24994 2830 23459 46970 37833 37833 1 9606 Homo sapiens 0.050213277781722354 SLKPDSVR Unmodified 900.50288 0.50288033 3062 H3BLU7;V9HWA2;O43488;B4DZX4;H7C5H7 AKR7A2;HEL-S-166mP Aflatoxin B1 aldehyde reductase member 2 yes no 0 0 1 8 0 1 36.497 36.483 3 0.069259 8044 20230619_1888_Aki_TMTPro18x_K_F8 52.49 39.531 107530 66472 85529 98228 120710 128840 119300 120200 158060 84710 121190 121390 103330 94802 114340 92033 151440 109900 99108 61182 89324 96937 122650 127720 121490 122450 157040 88765 125310 120690 106660 98482 117980 93620 144250 104350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98413000 24995 3062 23460 46971 37834 37834 1 9606 Homo sapiens 0.04864900754705559 SLLCGEDEAADENPESQEMLEEQLVR Oxidation (M) 3006.307 0.30702516 2082 A8K5Y7;Q9HAV4;B3KPQ5;B3KNC6;Q9H8N6;H0Y3W3 XPO5 Exportin-5 yes no 0 1 0 1 0 1 60.551 60.551 3 6.1462E-14 18717 20230619_1880_Aki_TMTPro18x_K_F1 133.51 126.47 8920.2 7551 10459 10595 9000.6 11357 10927 10717 11531 10484 10984 11952 12362 9014.7 11198 15239 12769 12533 8261.9 6936.5 10478 10458 9521.7 11405 10928 10989 11689 10652 11363 11976 12510 9725.7 11516 15049 12200 11933 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14590000 24996 2082 23461 46972 37835 37835 1303 1 9606 Homo sapiens -0.11587607127285082 SLLCGEDEAADENPESQEMLEEQLVR Unmodified 2990.3121 0.31211054 2082 A8K5Y7;Q9HAV4;B3KPQ5;B3KNC6;Q9H8N6;H0Y3W3 XPO5 Exportin-5 yes no 0 0 0 1 0 1 61.773 61.773 3 1.0816E-13 19218 20230619_1880_Aki_TMTPro18x_K_F1 129.23 124.01 5616.4 3569.4 3549.9 5228.2 3519.3 6020.9 6021.5 5140.7 5790.9 5266.5 6810.4 6052.5 6539.7 5888.4 5313.7 6301.4 7517.6 7634.5 5170.3 3284.5 3792.1 5148.7 3745.1 6000 5915.2 5319.5 5946.1 5342.3 6921.4 6108.2 6628.6 6101.8 5551.9 6397.2 7172.3 7236.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38362000 24997 2082 23461 46973 37836 37836 1 9606 Homo sapiens -0.10343303264698989 SLLDACESR Unmodified 1049.4812 0.48115861 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 43.028 43.101 2 1.0658E-05 10963 20230619_1882_Aki_TMTPro18x_K_F3 172.25 143.85 747380 515430 637700 708680 761840 968610 857680 939380 1205700 856810 968700 1285400 1151900 1051000 856690 1150800 1366300 1399100 689570 473770 659480 703010 785960 958390 869710 959160 1198100 884010 1014800 1276800 1157000 1096800 906030 1167800 1302600 1326200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 444240000 24998 2337;3778;3779 23462 46974;46975 37837;37838 37838 2 9606 Homo sapiens -0.04160272056174108 SLLDFLPR Unmodified 959.54402 0.54401687 49 G5EA31;A0A024QZM6;P53992;B4DSN3 SEC24C Protein transport protein Sec24C yes no 0 0 0 3 0 1 63.663 63.694 2 0.024976 19975 20230619_1882_Aki_TMTPro18x_K_F3 84.568 38.142 144380 132110 130070 143280 136250 137980 175860 154220 157790 177070 163750 151930 178560 146960 150220 182060 185080 212990 133500 121010 133510 143780 141940 140390 174410 157090 162140 176910 168310 155250 180420 153740 155360 184000 176940 201870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69786000 24999 49 23463 46976 37839 37839 1 9606 Homo sapiens 0.06262661794175983 SLLDGEGPQAVGGQDVAFSR Unmodified 2001.9756 0.97558275 1908 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 0 4.5 0.5 1 1 56.641 56.674 3 5.9724E-08 16885 20230619_1883_Aki_TMTPro18x_K_F4 109.37 100.82 31997 29876 35672 36502 34286 51055 44097 41549 57503 41518 38404 52829 55367 50167 44178 65825 63541 78876 29641 27395 35940 36503 36099 50265 44282 43107 57030 42356 41139 53025 55498 52667 46312 66546 60715 74722 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150180000 25000 1908 23464 46977;46978 37840 37840 1 9606 Homo sapiens 0.014673980535235387 SLLDICK Unmodified 847.44734 0.44733929 893 B7ZKT9;A0A087X256;Q2M389-2;Q2M389 KIAA1033 WASH complex subunit 7 yes no 0 0 0 8 0 2 52.439 52.515 2 0.017578 14352 20230619_1888_Aki_TMTPro18x_K_F8 96.964 15.006 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25001 893 23465 46979;46980 37841;37842 37841 2 9606 Homo sapiens 0.01751351242739929 SLLEGEGSSGGGGR Unmodified 1261.5899 0.58985744 1272 P13645;CON__P13645;A0A1B0GVI3 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 2.5 0.5 1 1 39.975 40.038 2 9.2479E-29 9800 20230619_1881_Aki_TMTPro18x_K_F2 261.52 220.09 + 25295 25025 30144 47895 970260 63533 184150 51495 146700 33404 58797 37809 55191 201040 62340 48430 46450 45191 23457 23072 43054 46608 904250 65600 229330 53346 148910 35393 64256 43823 57849 193210 62312 51127 44588 42962 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184400000 25002 1272 23466 46981;46982 37843;37844 37843 2 9606 Homo sapiens -0.030473895521936356 SLLEIQQEEAR Unmodified 1314.6779 0.67794416 288 Q6Y7W6;Q6Y7W6-5;Q6Y7W6-4;A0A024R4A5;Q6Y7W6-3;I1E4Y6;A0A7I2V361;A0A7I2V3H0;A0A7I2V516;A0A7I2V3H7 GIGYF2;TNRC15 PERQ amino acid-rich with GYF domain-containing protein 2 yes no 0 0 0 2 0 1 49.403 49.462 2 5.3195E-06 14215 20230619_1881_Aki_TMTPro18x_K_F2 184.9 136.96 74470 61612 69518 74839 70202 89326 78672 77346 84007 95337 91710 88022 100600 79435 78052 102960 102040 90424 68827 56516 71090 74676 73195 88928 79015 80318 85664 95154 94074 89419 101290 83484 81222 102320 97318 86061 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123890000 25003 288 23467 46983 37845 37845 1 9606 Homo sapiens 0.03319231038426551 SLLEPFVYLASK Unmodified 1365.7544 0.75440357 177 K7ERG2;A0A024R1Z4;H7BXP1;Q9NYR9-3;Q9NYR9-2;Q9NYR9 NKIRAS2 NF-kappa-B inhibitor-interacting Ras-like protein 2 yes no 0 0 0 4 0 1 65.236 65.246 3 0.0032053 20503 20230619_1883_Aki_TMTPro18x_K_F4 82.362 54.881 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25004 177 23468 46984 37846 37846 1 9606 Homo sapiens 0.08615654605705458 SLLESTYQR Unmodified 1095.556 0.55603812 1882 A0A994J7C7;Q96ST3;A0A994J7C5;B3KQE3 SIN3A Paired amphipathic helix protein Sin3a yes no 0 0 0 7 0 1 45.291 45.377 2 0.00015897 11493 20230619_1887_Aki_TMTPro18x_K_F7 146.03 116.22 85558 77584 81784 95941 89561 99477 98181 91444 101710 101870 109930 101600 114780 90458 119150 107790 110000 104950 79138 71157 83602 95408 92641 100150 98601 94290 103760 102390 112590 102820 117130 94628 120510 107930 105300 99731 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108900000 25005 1882 23469 46985 37847 37847 1 9606 Homo sapiens 0.012082337467290927 SLLFLDNCLR Unmodified 1249.6489 0.64889264 4535 Q9H974-2;Q9H974-3;Q9H974;Q9H974-4 QTRTD1 Queuine tRNA-ribosyltransferase subunit QTRTD1 yes no 0 0 0 2 0 1 62.02 62.03 2 4.6545E-05 19522 20230619_1881_Aki_TMTPro18x_K_F2 170.5 141.03 154840 139670 152630 147890 124670 168230 142330 156710 162940 182730 191680 172150 194290 163150 185300 199660 214440 214600 143250 127910 154800 149030 132450 168290 143260 161530 166060 182930 195310 175040 197780 170590 190270 200840 204890 203660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91636000 25006 4535 23470 46986 37848 37848 1 9606 Homo sapiens 0.03405415208408158 SLLGDSAPTLHLNK Unmodified 1464.7936 0.79364262 1082 B8ZZY2;A0A0S2Z444;A0A0S2Z3Y3;A0A0S2Z3Z1;A0A0S2Z462;P52594-2;P52594-3;P52594;P52594-4;C9J2I0;B4DHC5;A0A024R458 AGFG1;HRB Arf-GAP domain and FG repeat-containing protein 1 yes no 0 0 0 1 0 1 53.037 53.037 3 1.5508E-08 15623 20230619_1880_Aki_TMTPro18x_K_F1 145.92 119.33 104430 91325 99140 116500 94648 119980 107610 110490 120620 97751 89849 73180 88109 66342 96823 99039 90279 76992 96562 83797 101200 115590 99159 120790 108170 113200 120870 98769 93479 75270 90345 70419 97951 97764 86350 73410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22722000 25007 1082 23471 46987 37849 37849 1 9606 Homo sapiens 0.07983754889278316 SLLGPLK Unmodified 726.46398 0.46397563 4770 yes no 0 0 0 3 0 1 52.482 52.541 3 0.0097901 15273 20230619_1882_Aki_TMTPro18x_K_F3 94.262 3.2207 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25008 4770 23472 46988 37850 37850 1 9606 Homo sapiens 0.08980220190994714 SLLIDFFR Unmodified 1009.5597 0.55966693 2112 A8K800;Q9H7B2;Q5VXN0;B4DWS5 RPF2 Ribosome production factor 2 homolog yes no 0 0 0 3.5 0.5 1 1 64.556 64.577 2 0.00076897 20239 20230619_1883_Aki_TMTPro18x_K_F4 172.15 113.59 60467 51366 57183 59634 60694 62712 70874 63687 57829 72519 62506 60259 72384 56580 66645 85314 63394 72255 55900 47093 58431 59604 62963 63229 70464 65244 59938 72408 64351 61646 73248 60022 67800 84479 60747 68734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111700000 25009 2112 23473 46989;46990 37851 37851 1 9606 Homo sapiens 0.05526948311239721 SLLINAVEASCIR Unmodified 1444.7708 0.77079869 540;259 P32322-3;P32322;A0A024R8U9;E7D7X9;P32322-2;A0A1B2JLU7;E7D7Y0;E2QRB3;Q2TU78;J3QKT4;Q8TBX0;B7Z8T1;J3KR12;B4DQK8;B3KMB7;A0A087WTV6;A0A024R3Q9;Q4W8W1;A0A0S2Z5U6;Q96C36 PYCR1;PIG45;PYCR2;P5CR2 Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 no no 0 0 0 2 0 1 61.364 61.374 2 1.6005E-11 19190 20230619_1881_Aki_TMTPro18x_K_F2 213.38 151.98 111750 104740 90693 91450 74925 70267 97272 105440 90339 123870 122440 139040 125280 104240 151040 133800 111860 155290 103260 95769 93628 93328 79590 73606 96652 105770 93841 124510 124430 139210 128910 110280 150900 135230 107710 147110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 710260000 25010 540;259 23474 46991 37852 37852 1 9606 Homo sapiens 0.06620412500137718 SLLLSVNAR Unmodified 971.57638 0.57637963 3900;2497 Q14697-2;E9PKU7;B4DZ53;E9PNH1;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 5 0 1 50.89 50.965 2 0.0003105 14167 20230619_1885_Aki_TMTPro18x_K_F5 140.35 113.22 93329 81070 89954 88277 93030 108970 103020 108840 133080 86730 85468 76556 71361 65980 100030 73668 77852 76679 86306 74275 91708 88880 96759 108620 104210 110570 131820 88610 89308 77845 74678 68810 99845 74169 74695 72803 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 636540000 25011 3900;2497 23475 46992 37853 37853 1 9606 Homo sapiens 0.08945449197176458 SLLPTLEK Unmodified 899.53278 0.53278348 2401 C9J7B8;E9PHT3;B3KSA7;Q8IYS0-2;Q8IYS0 GRAMD1C GRAM domain-containing protein 1C yes no 0 0 0 1 0 1 56.681 56.681 3 0.0079821 17087 20230619_1880_Aki_TMTPro18x_K_F1 81.642 0 35009 28387 35037 38190 33712 40370 42189 37633 41144 46222 41858 42697 48939 42310 44962 54220 47381 49518 32370 26069 35597 37782 35360 40582 42009 38879 42043 46144 43238 43502 49540 44281 45976 54005 45325 47074 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46182000 25012 2401 23476 46993 37854 37854 1 9606 Homo sapiens 0.07899839700041866 SLLSAEEAAK Unmodified 1017.5342 0.53424004 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 4.5 0.5 1 1 49.39 49.445 3 8.7156E-08 13695 20230619_1883_Aki_TMTPro18x_K_F4 160.75 128.02 274430 234380 216430 281060 283610 274920 283980 290860 320600 335700 322670 343580 386480 285360 323610 392910 371980 327370 253380 214940 226040 279890 289160 278970 287420 297250 324890 337020 333870 346480 389170 302050 333210 389260 355130 311790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 480420000 25013 1229 23477 46994;46995 37855 37855 1 9606 Homo sapiens 0.026174289981327092 SLLSILQR Unmodified 928.57057 0.57056597 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;H0Y659;Q5H935 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 5.5 0.5 1 1 60.917 60.971 2 0.0027232 18533 20230619_1886_Aki_TMTPro18x_K_F6 135.77 73.108 209700 172990 202020 210880 181530 223730 215600 214660 238300 236250 232840 234710 242780 216240 258640 267980 244580 273890 193850 158690 205640 210050 191300 225010 216170 220520 241310 237570 239680 237760 248280 226390 262020 268770 234350 259970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 506570000 25014 594 23478 46996;46997 37856;37857 37857 2 9606 Homo sapiens 0.1034235068552789 SLLSLPEK Unmodified 885.51713 0.51713341 4208 Q8IX12-2;Q8IX12;A0A0C4DGG8;F5H2E6;F5H1H2 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 0 0 0 1 0 1 55.868 55.868 3 0.0038646 16812 20230619_1880_Aki_TMTPro18x_K_F1 84.498 43.068 58221 45749 52786 62939 50068 66126 62981 63991 73199 70644 75642 72753 79497 67683 63244 78252 75873 83038 53780 42029 54112 62165 52675 66533 63076 65703 74079 71113 77624 73611 80246 70554 65379 78691 72523 78793 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12374000 25015 4208 23479 46998 37858 37858 1 9606 Homo sapiens 0.06979553183009557 SLLSNDLK Unmodified 888.49165 0.49164694 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;X6RHM1;H3BM18;Q6K0P9-2;Q6K0P9;Q6K0P9-3;Q6K0P9-4;X6RHR0;Q6K0P9-5;H3BVE6;Q6K0P9-6 IFI16;PYHIN1 Gamma-interferon-inducible protein 16;Pyrin and HIN domain-containing protein 1 yes no 0 0 0 8 0 1 51.15 51.227 3 4.0128E-05 14047 20230619_1888_Aki_TMTPro18x_K_F8 174.52 79.167 28983 26840 25995 29833 58236 70268 50635 50984 79376 50270 52306 49619 57508 40683 49980 58601 52113 50632 26799 24589 27185 30392 57843 67520 52311 53343 78083 50907 55134 50133 58127 43234 51121 58129 49831 48180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49190000 25016 2829 23480 46999 37859 37859 1 9606 Homo sapiens 0.042940786605640824 SLLSSTSTTTK Unmodified 1124.5925 0.5924832 2285 B2RAH5;O14974-2;O14974;A0A024RBF1;O14974-5;O14974-4;F8VZN8;H0YHI8;A0A3B3ISH4 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A yes no 0 0 0 2 0 1 45.231 45.313 3 0.00029206 12273 20230619_1881_Aki_TMTPro18x_K_F2 103.34 85.829 106050 102190 124920 112660 182650 122390 151210 143490 147680 106790 131490 131160 132150 112890 141550 97672 248210 135010 98311 93604 126030 113150 183580 123750 154160 144170 149910 110660 135760 131410 135460 116290 149340 100640 235670 128260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44624000 25017 2285 23481 47000 37860 37860 1 9606 Homo sapiens 0.03517065852747692 SLLVIPNTLAVNAAQDSTDLVAK Unmodified 2352.29 0.2900406 3470 P17987;E7EQR6;F5H282 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 1.5 0.5 1 1 64.366 64.37 3 1.2840999999999998E-19 20566 20230619_1881_Aki_TMTPro18x_K_F2 127.35 117.2 15316 10424 12840 14097 11374 15286 15866 14207 13782 15256 16289 17324 16053 13535 13818 16624 14964 19816 14129 9580.4 13240 13947 12070 15333 15673 14624 14261 15419 16592 17362 16282 14254 14172 16825 14340 18770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67566000 25018 3470 23482 47001;47002 37861 37861 1 9606 Homo sapiens 0.1679871769260899 SLLVNPEGPTLMR Oxidation (M) 1441.7599 0.75989966 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 1 0 4.5 3.5 1 1 52.483 52.521 3 0.012877 14595 20230619_1888_Aki_TMTPro18x_K_F8 61.167 28.561 265090 212190 212380 241230 214270 277180 269220 243760 259880 316260 325890 266320 316400 272120 270150 323950 309430 332830 244690 194540 220400 241710 224270 276750 267970 253300 268110 314180 330410 273040 321020 283330 278000 325040 295840 315950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 706640000 25019 3606 23483 47003;47004 37862;37863 37863 2284 2 9606 Homo sapiens 0.05669010125848217 SLLVNPEGPTLMR Unmodified 1425.765 0.76498503 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 4.5 3.5 1 1 56.993 57.019 2;3 2.1576E-15 17258 20230619_1880_Aki_TMTPro18x_K_F1 261.29 158.82 278320 247570 264950 249520 166660 225780 233860 223640 254820 356630 332650 321010 355860 298150 302130 380100 353430 355720 257390 226650 268700 251750 183060 230150 232770 232230 261950 352050 338540 326720 359870 312680 311430 379050 337680 338120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 534340000 25020 3606 23483 47005;47006 37864;37865 37864 2 9606 Homo sapiens 0.06913313988479786 SLLVQTK Unmodified 787.48035 0.48035398 3567;2399 B3KS36;P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;Q49AJ9 RPL3;rpl3 60S ribosomal protein L3 no no 0 0 0 2 0.816 1 1 1 47.317 47.354 2 0.0038238 13175 20230619_1881_Aki_TMTPro18x_K_F2 152.41 39.819 1091800 848310 876880 907450 1133500 1160300 1129100 1128600 1287700 845890 745230 692340 923200 677030 808730 1004300 1006100 725770 1007600 777420 912610 915340 1156900 1153800 1143100 1147200 1280500 866220 797680 710270 930960 716390 836220 987800 958750 693320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1472599999.9999998 25021 2399;3567 23484 47007;47008;47009 37866;37867;37868 37867 3 9606 Homo sapiens 0.07811301357105549 SLMEQDVK Oxidation (M) 964.45355 0.45354688 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 1 0 3 0 2 40.73 40.789 2;3 0.0033342 9942 20230619_1882_Aki_TMTPro18x_K_F3 93.166 25.328 99623 70081 88334 94434 116760 118590 110000 112080 144590 119780 131220 141590 144340 110940 113570 144300 154380 145490 91951 64397 91125 93665 118850 117950 112340 115140 144760 121340 135860 141710 145400 117250 118440 144440 147250 138200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 80730000 25022 385 23485 47010;47011 37869;37870 37870 243 2 9606 Homo sapiens -0.030101753163989997 SLMSADNVR Oxidation (M) 1007.4706 0.47059393 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 1 0 4.6 1.02 1 1 2 1 34.948 35.016 2 0.0086283 7443 20230619_1883_Aki_TMTPro18x_K_F4 82.75 69.714 76969 57412 67964 72898 85825 88456 88640 79786 110680 81990 93497 85733 90496 73877 88911 91052 97196 86571 71063 52709 70087 72542 87811 88080 89838 82187 110720 82930 96556 86512 92375 77510 90903 90975 92843 82312 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 170530000 25023 3246 23486 47012;47013;47014;47015;47016 37871;37872;37873 37872 1914 3 9606 Homo sapiens -0.03284254710592904 SLNDLIEER Unmodified 1087.551 0.55095274 4376 V9HWH0;Q96KB5;Q96KB5-2;E5RFX4 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase yes no 0 0 0 2 0.816 1 1 1 52.583 52.614 2 0.0018056 15311 20230619_1882_Aki_TMTPro18x_K_F3 112.36 66.677 398540 328410 352840 426990 370080 431430 386730 387960 405740 411900 349270 354190 449400 321650 357550 430210 340830 332600 368180 301460 362940 423000 383760 434860 389620 400070 410420 413240 365410 361110 450660 338780 364670 424950 326210 316970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 856530000 25024 4376 23487 47017;47018;47019 37874 37874 1 9606 Homo sapiens 0.010679298841068885 SLNILTAFQK Unmodified 1133.6445 0.64445919 3526 V9HW71;P30040;F8VY02 HEL-S-107;ERP29 Endoplasmic reticulum resident protein 29 yes no 0 0 0 5 0.816 1 1 1 62.632 62.666 3 2.4713E-07 19127 20230619_1885_Aki_TMTPro18x_K_F5 149.23 65.366 237490 209980 233790 225180 206230 263440 249370 252030 294520 124540 112640 87906 101430 91742 203100 127850 123360 99497 219680 192350 237380 226790 217890 263170 250270 254840 289660 131900 123700 91277 108780 96387 199910 126560 118630 94890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 432240000 25025 3526 23488 47020;47021;47022 37875 37875 1 9606 Homo sapiens 0.08298274057165145 SLNLPVGSSQVLVPR Unmodified 1564.8937 0.89369102 3002 G1UI18;Q14997;F8WBH5 PSME4 Proteasome activator complex subunit 4 yes no 0 0 0 4 0 1 57.945 57.949 2 0.0071021 17468 20230619_1883_Aki_TMTPro18x_K_F4 89.44 72.602 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25026 3002 23489 47023 37876 37876 1 9606 Homo sapiens 0.1338399222308908 SLNPATIYPVLPK Unmodified 1411.8075 0.80750177 2452 Q659F8;Q8NC18;B4DDE5;Q9Y289 DKFZp434F152;SLC5A6 Sodium-dependent multivitamin transporter yes no 0 0 0 4 0 1 61.423 61.427 3 0.00067936 18922 20230619_1883_Aki_TMTPro18x_K_F4 89.629 71.318 34058 28119 32391 36851 27133 36355 35470 37468 41742 41641 37769 33924 44272 33609 38234 54695 43929 46228 31482 25814 32999 36487 28884 36805 35484 38306 42027 41627 39195 34830 44674 35809 39392 54094 41992 43989 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36908000 25027 2452 23490 47024 37877 37877 1 9606 Homo sapiens 0.11807032388378502 SLNQSLAEWK Unmodified 1174.5982 0.59823728 3652 P54709;H7C547;F8WBY4 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes no 0 0 0 8 0 1 56.165 56.222 2 2.6198E-23 16239 20230619_1888_Aki_TMTPro18x_K_F8 211.64 192.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25028 3652 23491 47025 37878 37878 1 9606 Homo sapiens 0.017922091550644836 SLNSIEFR Unmodified 964.49779 0.49779495 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7 0.816 1 1 1 48.571 48.648 2 0.0039757 12989 20230619_1887_Aki_TMTPro18x_K_F7 117.81 91.735 573380 449990 507190 519690 482370 616960 551510 538330 659150 646100 520410 627820 782050 527100 409870 900030 893800 898710 529550 412660 520520 520460 505840 614570 555370 558250 660500 646730 552190 634920 771910 567480 452720 896640 850540 853600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 723790000 25029 3758 23492 47026;47027;47028 37879 37879 1 9606 Homo sapiens 0.014125968920893683 SLNVSSSVNQASR Unmodified 1347.6743 0.67425577 1043 A0A0J9YVP0;O95714;A8KAQ8;A0A3B3IRP6 HERC2 E3 ubiquitin-protein ligase HERC2 yes no 0 0 0 8 0 1 39.414 39.401 2 0.03293 9229 20230619_1888_Aki_TMTPro18x_K_F8 59.57 40.79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25030 1043 23493 47029 37880 37880 1 9606 Homo sapiens 0.014325612645734509 SLNWSSFVDNTFAEEFTTQNQK Unmodified 2592.1769 0.17686133 3999 Q53GG0;Q9UHB6;F8VQE1;B4DN52;Q9UHB6-2;Q9UHB6-4;F8VS07;B3KTW2;Q9UHB6-3;Q9UHB6-5 LIMA1 LIM domain and actin-binding protein 1 yes no 0 0 0 8 0 1 65.123 65.143 3 2.9235E-08 20025 20230619_1888_Aki_TMTPro18x_K_F8 104.86 96.039 5475 4299.1 5283.4 5469.6 2872.8 2561.7 3267.3 3923.5 3338.1 5341.1 3573.2 5126 7223.7 4986.1 4014.1 7894.1 4423.3 4221.6 5059.9 3946.2 5344.8 5391.7 3181 2845.7 3282.1 3954.8 3421.8 5309.9 3822.8 5207.9 7096 5300.8 4182.4 7669.6 4226.9 4049.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9333200 25031 3999 23494 47030 37881 37881 1 9606 Homo sapiens -0.05554002491226129 SLNYCGHIYTPISCK Unmodified 1811.8335 0.8334753 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8;I3L2D8 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 3 0 1 49.901 49.976 3 0.00089838 14135 20230619_1882_Aki_TMTPro18x_K_F3 76.341 58.203 50811 48108 55095 56355 49393 57022 62774 57717 68000 52924 51009 52596 53049 47374 56515 60732 58781 53283 47063 44093 55543 56261 52116 57629 62666 58812 68258 53761 53257 53249 54272 49724 57554 60391 56182 50708 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104730000 25032 1601 23495 47031 37882 37882 1 9606 Homo sapiens -0.039968094939467846 SLPADILYEDQQCLVFR Unmodified 2066.0143 0.014276441 4004 Q8WYJ5;Q53HJ8;Q9BX68 HINT2 Histidine triad nucleotide-binding protein 2, mitochondrial yes no 0 0 0 6 0 1 63.527 63.575 3 1.5911E-09 19728 20230619_1886_Aki_TMTPro18x_K_F6 137.27 131.15 73664 58216 65225 72426 65242 64651 67748 66898 84187 75803 78978 80756 82216 70805 75905 90136 77560 91323 68036 53423 66986 71877 67822 66047 68684 68455 84616 76299 81429 81437 83514 74385 77473 90290 74288 86676 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126400000 25033 4004 23496 47032 37883 37883 1 9606 Homo sapiens 0.023909873637421697 SLPAEINR Unmodified 898.48723 0.48723027 1188 A0A140VJN3;Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes no 0 0 0 5.5 0.5 1 1 40.905 40.996 2 0.009171 9925 20230619_1885_Aki_TMTPro18x_K_F5 113.89 61.658 180920 134650 137380 159230 197880 224230 167330 170910 212120 185430 213730 187010 218270 175670 194890 219600 220680 196000 166860 123540 144210 159580 200170 220580 171860 178620 213590 186800 219200 189580 221460 183920 200140 218590 210730 186500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218730000 25034 1188 23497 47033;47034 37884 37884 1 9606 Homo sapiens 0.03392614237657199 SLPAVQSDER Unmodified 1100.5462 0.54620171 1582 A8K7A0;A0A5F9ZHU7;P49643;H9XFA6 PRIM2 DNA primase large subunit yes no 0 0 0 3 0 1 39.318 39.372 2 0.0034728 9344 20230619_1882_Aki_TMTPro18x_K_F3 111.61 67.258 31731 24237 32218 34667 51852 45192 38067 41250 48267 39594 40350 40819 45801 38834 36382 41061 48143 39423 29332 22279 32979 34277 51856 44829 39496 42351 48288 40164 42003 41316 46138 40239 37831 41130 45889 37493 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25046000 25035 1582 23498 47035 37885 37885 1 9606 Homo sapiens -4.9542586793904775E-05 SLPCDICK Unmodified 991.44669 0.44668736 58 Q53FJ5;A0A024QZQ2;Q59EN5;P07602;P07602-2;P07602-3;Q5BJH1 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D yes no 0 0 0 7 0 1 47.178 47.267 2 0.0015872 12317 20230619_1887_Aki_TMTPro18x_K_F7 114.5 87.896 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25036 58 23499 47036 37886 37886 1 9606 Homo sapiens -0.04937811468619202 SLPCQVYVNHGENLK Unmodified 1756.8567 0.85665359 2371 B9TX31;B3KP71;B4DQP6;M0QZQ2;Q71SY5-6;Q71SY5-5;Q71SY5;Q71SY5-4 MED25 Mediator of RNA polymerase II transcription subunit 25 yes no 0 0 0 8 0 1 46.753 46.801 3 4.7563E-14 12203 20230619_1888_Aki_TMTPro18x_K_F8 150.59 126.75 35701 27514 31143 41806 36579 40801 40206 36095 40482 43314 39165 38178 45653 36205 38167 49740 45729 51815 32965 25308 32165 40994 37668 41213 40324 37416 41210 43234 40523 38940 46023 38152 39426 49841 43722 49170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55685000 25037 2371 23500 47037 37887 37887 1 9606 Homo sapiens 0.008499526149989833 SLPDCTPHPNSISIDAGPR Unmodified 2032.9636 0.96363785 985 F8WF49;A0A0B4J2C2;Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0;A0A087WWE6;A0A087X246 DLGAP4 Disks large-associated protein 4 yes no 0 0 0 6 0 1 46.531 46.614 3 3.6805E-06 12401 20230619_1886_Aki_TMTPro18x_K_F6 97.352 86.313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25038 985 23501 47038 37888 37888 1 9606 Homo sapiens -0.011525419612780752 SLPDLGLR Unmodified 869.49707 0.49706667 332 A0A024R5C5;P11498;A0A494C101;A0A494C0T2;A0A494C016;P11498-2;E9PRE7 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 8 0 1 52.721 52.796 2 0.0011737 14736 20230619_1888_Aki_TMTPro18x_K_F8 147.34 89.778 444020 389230 396100 478980 387950 454800 440190 413180 516080 467460 483050 491960 449610 441400 577560 502730 518630 476500 410390 357010 406760 475910 405430 460770 443140 426710 519990 470440 496070 496570 466390 459890 581370 503070 496500 453010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236630000 25039 332 23502 47039 37889 37889 1 9606 Homo sapiens 0.0570980224304094 SLPEWLSDR Unmodified 1101.5455 0.54547343 1794 A0A8Q3SHT1;A0A8Q3SHX7;Q9BSC4;A0A8Q3SHW5;Q9BSC4-2;Q9BSC4-4;A0A8Q3SHT6;A0A8Q3SHT2;A0A8Q3SHZ5;A0A8Q3SIR1;A0A8Q3SHS4 NOL10 Nucleolar protein 10 yes no 0 0 0 5.5 0.5 1 1 57.314 57.379 2 0.01653 17015 20230619_1886_Aki_TMTPro18x_K_F6 85.744 48.585 70813 63220 66085 64904 65588 72815 70012 74512 86157 76425 75371 75087 85349 64358 78321 83400 84099 91767 65480 57887 67507 65563 68323 73100 70854 76032 86426 77105 78275 75941 86410 67808 80114 83950 80462 87044 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39773000 25040 1794 23503 47040;47041 37890 37890 1 9606 Homo sapiens -0.0012374890770843194 SLPGAEDYLK Unmodified 1091.5499 0.5498901 2422 B3KUP0 yes yes 0 0 0 5 0 1 52.292 52.366 2 0.00027755 14781 20230619_1885_Aki_TMTPro18x_K_F5 153.05 0 32947 26014 28562 24965 32303 37106 34036 32449 38608 34793 39103 36706 38488 29541 40596 38136 38601 45607 30425 23818 29417 25483 33330 36505 34356 33525 39080 35104 40062 36948 39375 31192 41122 38606 37001 43213 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30423000 25041 2422 23504 47042 37891 37891 1 9606 Homo sapiens 0.007777155151643456 SLPGCQEIAEEFR Unmodified 1534.7086 0.70859237 952 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;A0A994J5J9;Q8IXK0-2;Q8IXK0-4;Q8IXK0;Q8IXK0-5;P78365 PHC2;HPH2 Polyhomeotic-like protein 2 yes no 0 0 0 3.5 0.5 1 1 55.522 55.548 2 2.999E-10 16589 20230619_1882_Aki_TMTPro18x_K_F3 171.05 112.38 71549 64225 72892 75630 70744 79011 69198 70164 79851 85740 88666 84546 89715 76945 83505 95947 92682 97837 66210 58879 73908 75495 73627 79454 70236 72717 81142 85781 90574 85654 91242 80633 85601 96180 88625 92887 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88906000 25042 952 23505 47043;47044 37892;37893 37892 2 9606 Homo sapiens -0.0373735863888669 SLPGPAPCLK Unmodified 1038.5532 0.55320134 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;A0A7P0Z4H6;A0A590UJX5;A0A7P0T999;E9PJF6 AMPD2 AMP deaminase 2 yes no 0 0 0 2 0 1 50.06 50.112 3 0.00064232 14481 20230619_1881_Aki_TMTPro18x_K_F2 96.618 72.588 90619 82956 107320 103990 115780 117260 132240 108270 121970 119940 115840 104270 115920 101620 147340 123930 106430 115960 83983 76092 107750 103480 119840 117390 132010 111600 124630 120140 119170 106530 119780 106080 146890 123810 102290 110190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122780000 25043 1570 23506 47045 37894 37894 1 9606 Homo sapiens 0.03546687088191902 SLPIVFDEFVDMDFGTGAVK Oxidation (M) 2202.0555 0.055472553 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1 VARS Valine--tRNA ligase yes no 0 1 0 6.5 0.5 1 1 66.049 66.083 3 8.5575E-08 20789 20230619_1886_Aki_TMTPro18x_K_F6 99.021 88.077 14432 9072.9 9505.9 14411 15278 12383 13386 13695 13238 13913 15685 12894 13752 13373 12674 13179 9975 18839 13288 8357.6 10176 14076 15336 12711 13602 13909 13597 14016 15874 13162 14049 13774 12765 13561 9631.4 17801 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29409000 25044 725 23507 47046;47047 37895;37896 37895 441 2 9606 Homo sapiens 0.0025270361252296425 SLPIYSPEK Unmodified 1032.5492 0.54916182 2174 E9PDF6;B0I1S9;O43795-2;O43795;E7EQD9;Q05CR5;C9JYW1;C9JUP5;C9K0I9 MYO1B Unconventional myosin-Ib yes no 0 0 0 8 0 1 51.741 51.818 3 0.050582 14302 20230619_1888_Aki_TMTPro18x_K_F8 46.406 24.414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25045 2174 23508 47048 37897 37897 1 9606 Homo sapiens 0.034189208661246084 SLPLNPK Acetyl (Protein N-term) 809.4647 0.46470391 3715 P62306;A0A0B4J254;F8W0W6 SNRPF Small nuclear ribonucleoprotein F yes no 1 0 0 6 0.816 1 1 1 53.237 53.31 2 0.027477 15296 20230619_1886_Aki_TMTPro18x_K_F6 77.748 66.875 207740 148610 179380 199490 215010 272470 192510 205930 376330 248070 255630 344340 382510 285760 197200 427700 422660 414920 191720 136540 185260 198120 220670 268330 200990 216080 367920 251760 273790 343240 377620 304280 217480 426040 402160 394250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1227800000 25046 3715 23509 47049;47050;47051 37898;37899 37898 2 9606 Homo sapiens 0.05235014840036456 SLPQSDPVLK Unmodified 1082.5972 0.59717465 2121 B4DX01;A8K8F0;Q9HC38-2;Q9Y3E8;Q9HC38;I3L3Q4;B3KV49;B7Z403;Q9HC38-3 GLOD4 Glyoxalase domain-containing protein 4 yes no 0 0 0 6.5 0.5 1 1 48.752 48.834 2 4.4783E-05 13409 20230619_1886_Aki_TMTPro18x_K_F6 169.76 91.426 148220 119910 133590 145420 144980 158240 160980 158730 168890 154400 183290 185580 180500 155170 165970 184700 195010 191280 136930 110000 137170 144940 150130 159070 161650 162040 172100 157220 187280 186010 183640 162610 170730 185450 186270 181630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127590000 25047 2121 23510 47052;47053 37900;37901 37900 2 9606 Homo sapiens 0.05917994786159397 SLPSDVESR Unmodified 988.48254 0.48253882 2635 B4E005;Q9GZS1;Q9GZS1-1 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes no 0 0 0 2.5 0.5 1 1 38.604 38.664 2 5.3646E-08 9188 20230619_1881_Aki_TMTPro18x_K_F2 197.5 182.96 67520 58972 59420 62550 77849 81253 69219 67897 94512 80954 84408 86309 96767 73278 69879 98310 103400 86837 62399 54016 61321 63135 79203 80477 71058 70629 94445 81325 87591 86957 97070 77360 73529 97665 98490 82660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70706000 25048 2635 23511 47054;47055 37902 37902 1 9606 Homo sapiens -0.012163146957618665 SLPSVETLGCTSVICSDK Unmodified 1951.9231 0.92307817 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9;Q8N3X5;O14983-2;O14983;Q7Z675;Q7Z6E5;O14983-3;A8K9K1;Q93084-3;Q93084-5;Q93084-6;Q93084-1;Q93084-7;Q93084;Q93084-4;H3BTW4 ATP2A2;ATP2A1;DKFZp779O2152;DKFZp779G2251;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 0 0 0 7 0.816 1 1 1 59.356 59.402 3 1.0636E-09 17527 20230619_1887_Aki_TMTPro18x_K_F7 135.09 129.19 159210 136690 166910 166480 140940 142130 166570 156400 178560 196480 209260 192730 214320 210380 178750 224600 204800 209840 147320 125370 168490 165420 149000 145980 166920 159940 182520 196310 213340 196520 217070 217040 184090 224540 195740 199440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1185300000 25049 1076 23512 47056;47057;47058 37903;37904;37905 37904 3 9606 Homo sapiens -0.014806443959059834 SLPTTVPESPNYR Unmodified 1459.7307 0.73070802 4130 Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A8I5KSP1;A0A0B4J210;E5RH50;H0YC33 LARP1 La-related protein 1 yes no 0 0 0 6.67 0.471 1 2 46.819 46.905 2;3 1.9329E-07 12544 20230619_1886_Aki_TMTPro18x_K_F6 190.96 156.58 83278 74937 79708 81357 90214 88671 103670 99046 107700 90964 106690 95454 94654 79337 112270 88328 97706 106040 77026 68646 81437 81784 93136 89400 103850 100260 109370 92505 108960 96194 97793 82883 112920 89686 93683 100490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 128810000 25050 4130 23513 47059;47060;47061 37906;37907 37906 2 9606 Homo sapiens 0.019231891012623237 SLPVEEQPK Unmodified 1025.5393 0.53932542 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q6JH03;Q6JH02 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 3.5 0.5 2 2 44.306 44.365 2;3 0.00065024 11419 20230619_1883_Aki_TMTPro18x_K_F4 144.12 102.47 260510 194090 226670 260620 303840 343120 321620 292270 375900 294740 346840 347900 335980 303070 298120 335390 378330 341780 240500 178300 234500 258690 310170 339450 324740 302220 378400 299590 356720 349310 341660 315700 308430 336800 360950 324690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 258060000 25051 1863 23514 47062;47063;47064;47065 37908;37909;37910 37909 3 9606 Homo sapiens 0.027577328607549134 SLPVPQLVPETEDEK Unmodified 1679.8618 0.86178177 3205 O00154-4;O00154-6;O00154-7;O00154;O00154-5;B4DUX0 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 4.4 1.02 1 2 1 1 59.672 59.702 3 2.5032E-08 18307 20230619_1882_Aki_TMTPro18x_K_F3 141.85 119.82 177260 139520 171350 173010 133150 156050 156210 161700 187290 174800 170310 178060 172110 161600 177760 189880 181930 203580 163820 128040 173980 171790 142070 159210 157230 165190 188360 176070 175710 180040 175980 168690 180970 191090 174180 193140 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 538560000 25052 3205 23515 47066;47067;47068;47069;47070 37911;37912;37913;37914 37911 4 9606 Homo sapiens 0.049045349586094744 SLPVPQLVPETEDEKK Unmodified 1807.9567 0.95674479 3205 O00154-4;O00154-6;O00154-7;O00154;O00154-5;B4DUX0 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 1 5.25 0.829 1 1 2 55.241 55.298 3;4 5.9365E-09 15994 20230619_1885_Aki_TMTPro18x_K_F5 113.01 103.1 148820 128990 152060 151220 119870 134340 139270 141740 160370 184070 168470 171030 188750 162210 157340 188090 174610 182780 137690 118260 153690 150730 127600 137340 140060 145440 162670 183320 173350 173880 190520 168990 161670 188220 166950 173630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 745370000 25053 3205 23516 47071;47072;47073;47074 37915;37916 37915 2 9606 Homo sapiens 0.08508468429795357 SLPYNQPGTCYTLVALPK Unmodified 2021.0292 0.029198224 4753 Q9Y678;B3KW21;Q8WUI6;H0Y8X7;H0Y8G2 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 3.5 0.5 1 1 61.709 61.725 3 0.0080396 19040 20230619_1883_Aki_TMTPro18x_K_F4 63.145 51.54 187190 131100 148170 207840 153430 179380 147180 175030 213390 219900 220610 242080 274620 247320 186800 323040 305910 354460 172630 120700 154180 203030 159110 183350 150920 180330 214070 220550 228390 245050 274630 258940 198840 324700 291880 336160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276740000 25054 4753 23517 47075;47076 37917 37917 1 9606 Homo sapiens 0.05952479231723373 SLQALGEVIEAELR Unmodified 1526.8304 0.83042206 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2;K7ER16;K7EK06 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 6 0.707 1 2 1 65.453 65.492 2;3 4.1654E-08 20363 20230619_1885_Aki_TMTPro18x_K_F5 169.79 128.91 34918 28453 33371 36254 30515 33145 39976 33238 37156 36128 39321 42898 42451 36330 42857 44522 40275 48695 32275 26114 34007 35931 32157 33758 39663 34063 38093 36562 40419 43020 43242 38127 43443 44837 38618 46176 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171480000 25055 4109 23518 47077;47078;47079;47080 37918;37919 37918 2 9606 Homo sapiens 0.08808006715207739 SLQDIIAILGMDELSEEDK Unmodified 2118.0402 0.04021642 3391 Q0QEN7;V9HW31;P06576;F8W079 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 5 0 1 67.644 67.687 3 0.036886 21250 20230619_1885_Aki_TMTPro18x_K_F5 44.587 36.197 2170.3 1242.2 935.6 2064.7 0 2370.2 1302 2676 1566 2036.6 2961.4 2503.6 2297.5 3852.1 1912.3 3046.5 3111.7 3678.2 1993.6 1145.5 1049 2018.7 0 2372 1249.7 2691.4 1633.5 2106.5 2939.6 2570.7 2361.2 3878.6 2024.1 3107 2969.6 3484.8 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 9011300 25056 3391 23519 47081 37920 37920 1 9606 Homo sapiens 0.025917920246683934 SLQEEHVAVAQLR Unmodified 1478.7841 0.78414057 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 0 4 0 1 42.102 42.145 3 1.244E-06 10484 20230619_1883_Aki_TMTPro18x_K_F4 126.1 93.938 35940 31642 37005 41045 47618 45632 49342 47100 61980 52277 53879 49079 49437 43434 49947 52674 47090 48341 33256 29038 37684 40736 48623 45844 50017 48152 62077 52479 55436 49794 50627 45469 50640 52540 45092 45956 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78035000 25057 3921 23520 47082 37921 37921 1 9606 Homo sapiens 0.06389986603744546 SLQEEQSRPPTAVSSPGGPAR Unmodified 2150.0716 0.071608399 879 A0A087X0M4;A0A8Q3WKX9;Q9BWU0;A0A8Q3WLG9;A0A8Q3WKX1 SLC4A1AP Kanadaptin yes no 0 0 1 5.5 0.5 1 1 37.33 37.41 3 1.0642E-36 8481 20230619_1886_Aki_TMTPro18x_K_F6 221.48 198.19 60650 50484 51675 61018 62766 68433 60918 58436 70814 64383 68622 73809 84615 72857 69825 84944 81837 80174 56018 46306 53459 60838 64297 68417 61830 60569 71505 65071 71239 74489 85165 75806 72007 84861 78173 76207 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 86633000 25058 879 23521 47083;47084 37922;37923;37924;37925 37925 4 9606 Homo sapiens 0.042575458936426 SLQEQADAAEER Unmodified 1345.611 0.61098681 3083 H7BYY1;B7Z596;F5H7S3;Q1ZYL5;B7Z722;D9YZV7;P09493-5;A0A494BZZ2;H0YKJ4;H0YK48;Q59GR8;H0YN06;Q07413 TPM1 Tropomyosin alpha-1 chain yes no 0 0 0 1 0 1 38.175 38.175 2 6.5824E-18 9264 20230619_1880_Aki_TMTPro18x_K_F1 270.06 249.08 127550 95261 101690 128750 118320 120790 138490 127580 173600 160530 168600 156600 183730 145320 132340 193250 185710 166740 117680 87514 105870 127120 122160 122920 139480 130800 174640 160400 173730 158880 184570 152820 138750 191760 177040 158730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 287680000 25059 3083 23522 47085 37926 37926 1 9606 Homo sapiens -0.04799424243356043 SLQPAVAEK Unmodified 941.5182 0.51819605 511 A0A8Q3SHZ4;A0A494C1F2;A0A024R8B6;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A8Q3WLX1;Q7Z3C4;A0A494BZU9 NUP214;DKFZp686J0330 Nuclear pore complex protein Nup214 yes no 0 0 0 6 0 1 43.263 43.356 2 0.00065684 10951 20230619_1886_Aki_TMTPro18x_K_F6 128.03 70.436 50378 36325 52372 54855 62999 66612 53243 59992 71939 59716 70206 68157 68622 58133 61054 58463 78397 72784 46564 33419 53199 54003 64342 66297 54856 61718 72126 60650 72015 68466 69741 60335 63154 59560 74803 69000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43274000 25060 511 23523 47086 37927 37927 1 9606 Homo sapiens 0.045097675518945834 SLQPCECHQIK Unmodified 1398.6384 0.63840431 2065 Q9NW82;A8K564;D6RIW8 WDR70 WD repeat-containing protein 70 yes no 0 0 0 6.5 0.5 1 1 38.347 38.42 3 0.00011688 8873 20230619_1886_Aki_TMTPro18x_K_F6 118.37 84.962 75632 53097 67790 77464 92415 83821 96168 84668 92820 84499 94394 87311 93490 78009 81893 88290 104940 91308 69813 48835 69936 76281 93984 84320 96597 86469 94794 85503 96689 88228 94904 81333 84778 88716 100090 86743 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68638000 25061 2065 23524 47087;47088 37928;37929 37928 2 9606 Homo sapiens -0.04496935508313982 SLQQLAEER Unmodified 1072.5513 0.55128709 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 45.508 45.587 2 9.9898E-12 12106 20230619_1882_Aki_TMTPro18x_K_F3 219.97 159.47 414350 343580 364140 379030 396130 434080 446080 452360 509730 480410 527750 513670 554250 444550 478350 581060 557180 554250 382790 314880 374680 380780 410410 435290 448870 461540 516320 485030 541630 517890 561090 468130 492670 579910 532330 526730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 754400000 25062 1022;3868 23525 47089;47090 37930 37930 1 9606 Homo sapiens 0.017913496039454913 SLQSENAALR Unmodified 1087.5622 0.56218613 1365 P39880-3;P39880-9;A0A2R8Y852;A0A2R8YDI1;Q13948-10;Q13948-2;Q13948-9;Q13948;P39880-6;P39880-4;P39880-5;P39880-2;P39880;Q3LIA3 CUX1;Nbla10317 Homeobox protein cut-like 1;Protein CASP yes no 0 0 0 4 0 1 38.005 38.048 2 0.00011878 8736 20230619_1883_Aki_TMTPro18x_K_F4 126.29 96.108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25063 1365 23526 47091 37931 37931 1 9606 Homo sapiens 0.02190751978218941 SLQSKDEQQQLDFR Unmodified 1720.838 0.83802663 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-3;Q9NSQ6;H0Y8F1;B3KP36;C9JQR6 PTK7;DKFZp434L0319 Inactive tyrosine-protein kinase 7 yes no 0 0 1 5 0 1 44.517 44.596 3 1.141E-11 11487 20230619_1885_Aki_TMTPro18x_K_F5 179.81 157.59 83121 95124 87387 79213 97993 81633 96042 87343 69721 93913 115110 84504 72249 61707 129160 60638 61572 43523 77083 86896 88493 81471 100590 82668 96191 89029 74369 94180 114000 85475 77687 64322 126220 60249 59440 41586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83175000 25064 3847 23527 47092 37932 37932 1 9606 Homo sapiens 0.0064411424480113055 SLQSLLGPSSK Unmodified 1115.6186 0.61863837 974 P57737-3;A0A0A6YYL4;P57737;P57737-4;P57737-2;B3KSY4;B3KUH7;B4DKU9;I3L167;B4E0F2;E7EP81 CORO7;CORO7-PAM16;hCG_1787779 Coronin-7;Coronin yes no 0 0 0 3.67 0.471 1 2 56.123 56.141 2;3 0.0017179 16874 20230619_1882_Aki_TMTPro18x_K_F3 71.176 49.028 92855 96687 108140 100330 160480 185640 137260 131210 157880 126560 125660 120990 124610 106940 118920 122560 137410 143780 86124 88495 109350 102160 161970 180000 140320 137610 158370 128110 130380 122610 126980 111650 122070 124080 131340 136310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 224500000 25065 974 23528 47093;47094;47095 37933;37934 37933 2 9606 Homo sapiens 0.0654537981492922 SLQSVAEER Unmodified 1017.5091 0.50908792 210 A0A024R2Q4;P61313;A0A2R8YEM3;E7EQV9;B4DLP4;E7EX53;A0A2R8Y738;P61313-2 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 0 0 0 2.5 0.5 1 1 39.392 39.454 2 1.2551E-10 9528 20230619_1881_Aki_TMTPro18x_K_F2 218.58 141.52 2079500 1727500 1898300 2137200 2162500 2282600 2389300 2246600 2290500 2350300 2462400 2245700 2828000 2027100 2052500 2905800 2698300 2278000 1921600 1584900 1948900 2126500 2230100 2296700 2392700 2300800 2346800 2366300 2532200 2279400 2835700 2145600 2141000 2868300 2572500 2171800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5366600000 25066 210 23529 47096;47097 37935;37936 37935 2 9606 Homo sapiens 0.0010337419556663008 SLQTVSGR Unmodified 846.45593 0.45593014 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;Q9BZZ5-5;Q9BZZ5-6;Q9BZZ5-3;H0YER7 API5 Apoptosis inhibitor 5 yes no 0 0 0 4.67 2.62 1 1 1 34.681 34.743 2 0.0021436 7198 20230619_1887_Aki_TMTPro18x_K_F7 131.41 88.162 95035 47633 113410 119560 146610 147670 128360 144870 136140 94626 150440 159600 124960 120690 139600 65630 157720 155250 87804 44260 114190 115060 149000 147000 130800 146830 138600 100320 152660 157640 129130 122890 142270 72110 150710 146520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79525000 25067 4478 23530 47098;47099;47100 37937;37938 37938 2 9606 Homo sapiens 0.026560412035678382 SLQYEYK Unmodified 929.44945 0.44944778 3312 O75643;A0A494C1A5;O75643-2 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 6.5 0.5 1 1 45.676 45.763 2 0.0072821 12002 20230619_1886_Aki_TMTPro18x_K_F6 131.06 72.375 200540 168390 169030 210650 210510 241090 232270 206640 274380 207180 242520 209290 208430 179100 221700 248800 265470 205620 185220 154500 175240 209570 216150 240660 234090 213600 275570 209600 248640 211600 214530 189350 227750 246420 253170 195980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177230000 25068 3312 23531 47101;47102 37939 37939 1 9606 Homo sapiens -0.018098967478181294 SLRPAVER Unmodified 926.52976 0.52976379 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;E9PNZ4;A0A5F9ZGX0;E9PLY5;Q6ZSD7;E9PLY0 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 1 7.5 0.5 1 1 30.675 30.732 3 0.0061712 5625 20230619_1887_Aki_TMTPro18x_K_F7 90.919 53.108 65662 38669 62809 65671 78831 82121 75603 76426 95668 85100 100180 94212 99148 83434 77513 102370 114340 98027 60588 35664 64295 64275 80526 81631 77036 78687 96467 85848 102450 94918 100230 87411 81363 102250 108930 93212 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69200000 25069 1566 23532 47103;47104 37940;37941 37940 2 9606 Homo sapiens 0.06356009365890714 SLSALGNVISALAEGSTYVPYR Unmodified 2267.1798 0.17976186 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;Q6P164;Q66K46;Q2TA90 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 5 0 1 66.807 66.849 3 0.0057932 20887 20230619_1885_Aki_TMTPro18x_K_F5 61.111 44.033 72688 47653 35664 31573 24483 27406 108010 114470 78303 43959 36636 42736 66975 61468 46023 32732 76189 83728 66846 43558 39190 33345 28530 30038 103040 108930 79633 48119 40948 44077 66480 61353 48748 36248 72657 78957 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88128000 25070 2727 23533 47105 37942 37942 1 9606 Homo sapiens 0.0968591742425815 SLSAQEEK Unmodified 890.43453 0.434526 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 3 0 1 37.962 38.016 2 0.00070035 8767 20230619_1882_Aki_TMTPro18x_K_F3 125.82 70.287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25071 1022;3868 23534 47106 37943 37943 1 9606 Homo sapiens -0.015073886158120331 SLSDTVEK Unmodified 877.43928 0.43927702 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;E7EWF7 DCTN1;DKFZp686I0746 Dynactin subunit 1 yes no 0 0 0 3.5 0.5 1 1 43.181 43.236 2 0.0016679 10941 20230619_1883_Aki_TMTPro18x_K_F4 149.65 64.442 37263 27534 44681 53624 61368 68462 50996 61337 61987 48431 75032 90707 62345 62795 67982 39501 84606 83393 34492 25419 45077 52139 62146 67883 52397 62799 62964 50924 75929 89115 64373 64451 69781 42627 80782 78746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49846000 25072 1717 23535 47107;47108 37944 37944 1 9606 Homo sapiens -0.004345044730484915 SLSEAPEDTSTR Unmodified 1291.5892 0.58918874 3573 Q5SY38;P41214;Q59FU5 EIF2D Eukaryotic translation initiation factor 2D yes no 0 0 0 1.5 0.5 1 1 36.484 36.513 2 2.4439E-17 8578 20230619_1880_Aki_TMTPro18x_K_F1 223.31 169.82 35144 22862 29039 31745 48304 43150 37538 38678 51466 35991 44123 45591 47292 39003 44556 36250 54355 49164 32409 21022 30298 31466 48322 42681 38890 39742 51310 36845 45763 45614 48040 40325 45844 37225 51876 46578 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34718000 25073 3573 23536 47109;47110 37945 37945 1 9606 Homo sapiens -0.04494228991916316 SLSELESLK Unmodified 1004.539 0.53899107 3486 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 5 0 1 57.894 57.951 3 0.00035297 17055 20230619_1885_Aki_TMTPro18x_K_F5 107.57 58.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25074 3486 23537 47111 37946 37946 1 9606 Homo sapiens 0.03690313140896251 SLSGELR Unmodified 760.40792 0.40791731 4208 Q8IX12-2;Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 0 0 0 4.5 0.5 1 1 38.469 38.536 2 0.0096238 8953 20230619_1883_Aki_TMTPro18x_K_F4 119.07 30.43 138680 111840 121600 142640 134360 155930 160810 165050 201720 154000 196330 185040 173060 146930 144740 173710 197580 181440 128090 102650 125300 141680 139410 156830 161850 167690 202700 157240 200530 185240 176070 154220 150750 174490 188420 172310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155160000 25075 4208 23538 47112;47113 37947 37947 1 9606 Homo sapiens 0.018129672835243582 SLSGLILK Unmodified 829.5273 0.52730417 629;445 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;A0A7P0T944;A0A7P0T9C0;B4DSC0;E7EW37;B4DRY5;A0A024R7F7;O14787-2;Q4LE60;O14787;A0A075B780;Q05D48;B3KPC8;K7ENW1;K7ESC1 TNPO1;TNPO2;TNPO2 variant protein Transportin-1;Transportin-2 no no 0 0 0 3.5 0.5 2 2 58.419 58.435 2;3 0.00043896 17650 20230619_1883_Aki_TMTPro18x_K_F4 181.81 63.872 561190 472950 533910 532770 478680 565510 520340 517350 548130 571690 613490 554860 626040 537610 611470 687240 648970 672960 518810 433490 543780 533750 503030 568330 523410 533380 559590 574370 626610 563950 637880 563050 624540 687180 620730 639240 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1165900000 25076 629;445 23539 47114;47115;47116;47117 37948;37949;37950 37950 3 9606 Homo sapiens 0.10572160908236583 SLSLCNMFLDEMAK Unmodified 1657.7514 0.75138516 4706 Q9Y2A7;Q9Y2A7-2;A0A994J4I5;A0A994J6K9 NCKAP1 Nck-associated protein 1 yes no 0 0 0 8 0 1 64.222 64.243 3 1.4392E-08 19634 20230619_1888_Aki_TMTPro18x_K_F8 147.66 129.2 42095 34303 39480 41088 34094 42524 42533 40747 45254 52987 44020 50939 56590 43225 47349 62850 53905 61550 38903 31463 40258 40963 36108 42846 42488 42084 45965 52816 45821 51531 56893 45906 48761 62716 51566 58446 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190990000 25077 4706 23540 47118 37951 37951 1 9606 Homo sapiens -0.05118047897303768 SLSLGEVLDGDR Unmodified 1259.6357 0.635745 2694 E9PSI1;B7Z6C9;E9PJC4;E9PQY7;E9PS99;E9PL78;E9PJM1;E9PMQ9;A8K7U5;O15321-2;O15321 TM9SF1 Transmembrane 9 superfamily member 1 yes no 0 0 0 3 0 1 58.33 58.36 2 0.0021687 17744 20230619_1882_Aki_TMTPro18x_K_F3 92.611 71.147 22662 15943 23861 24255 22574 24758 26976 28108 29792 27230 23712 29801 26354 24805 30689 26803 26039 31944 20946 14670 24124 23816 23662 25064 27034 28457 29954 27641 24789 29939 27033 25854 30854 27204 25000 30264 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24563000 25078 2694 23541 47119 37952 37952 1 9606 Homo sapiens 0.016312556300590586 SLSPDCGGSIEVMQSFLK Unmodified 1953.9176 0.91759886 962 A0A0A0MTB8;Q8NI36 WDR36 WD repeat-containing protein 36 yes no 0 0 0 4.5 3.5 1 1 63.353 63.376 3 8.5222E-10 19271 20230619_1888_Aki_TMTPro18x_K_F8 137.19 126.72 53958 43394 53713 52100 46439 61122 60693 52487 68328 60734 61281 64056 75182 61924 57597 78824 92581 81536 49886 39805 54483 52027 49274 60905 60591 54464 68884 61076 63821 64830 75489 64856 60917 79021 88166 77455 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 229070000 25079 962 23542 47120;47121 37953;37954 37954 2 9606 Homo sapiens -0.021203231877734652 SLSPDCGGSIEVMQSFLK Oxidation (M) 1969.9125 0.91251349 962 A0A0A0MTB8;Q8NI36 WDR36 WD repeat-containing protein 36 yes no 0 1 0 7 0 1 58.86 58.909 3 0.0002298 17353 20230619_1887_Aki_TMTPro18x_K_F7 82.349 70.909 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25080 962 23542 47122 37955 37955 542 1 9606 Homo sapiens -0.03364627050382296 SLSPEQDIK Unmodified 1015.5186 0.51858998 4713 Q9Y305-3;Q9Y305-2;Q9Y305;Q9Y305-4;H7C5Q2;C9J7L8;Q96EA2 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial yes no 0 0 0 3.5 0.5 1 1 45.484 45.544 2 2.5019E-09 11963 20230619_1883_Aki_TMTPro18x_K_F4 217.64 158.83 65956 54598 61145 73035 111390 110850 93417 96886 128600 83254 100140 109020 105120 87642 85414 108640 118110 105310 60955 50133 63338 72695 111220 108900 96252 99542 127750 85749 104330 108810 106230 92197 89127 108580 112600 100100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80536000 25081 4713 23543 47123;47124 37956 37956 1 9606 Homo sapiens 0.011451424810843491 SLSSPGGPSKPK Unmodified 1140.6139 0.61388734 4476 Q9BZE9;Q9BZE9-2;Q9BZE9-3;J3QL04;J3QR12;Q9BZE9-4;J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 yes no 0 0 1 3 0 1 39.167 39.221 3 0.033811 9287 20230619_1882_Aki_TMTPro18x_K_F3 56.087 38.651 30980 20321 35008 34302 36586 36927 40835 37960 35401 38190 44555 38986 32041 29080 48087 22673 37461 28728 28641 18731 35247 33515 37929 37153 40768 38723 36731 38587 44733 39185 33853 29986 47884 23318 35885 27254 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33640000 25082 4476 23544 47125 37957 37957 1 9606 Homo sapiens 0.049204956721496274 SLSVPAASTAKPPPLPR Unmodified 1687.9621 0.96210494 1309 B3KWH7;X5D9D6;A0A1V1FWM5;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;A0A2R8Y6C9;X5D2U8;X5D7Q2;A0A2R8YGU4;A0A2R8Y5F1;A0A386NCL5;A0A1V1G0E9;A0A1V1FGH9;A0A1V1FTF4;A0A1V1FWL6;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;P49815 TSC2 Tuberin yes no 0 0 1 5 0 1 48.632 48.709 3 0.00018094 13179 20230619_1885_Aki_TMTPro18x_K_F5 88.951 69.113 26336 20542 26483 31060 27171 29464 26867 26974 33515 24777 33667 34997 35140 27300 25730 31146 33134 27822 24346 18893 26924 30462 28166 29849 27322 27690 33734 25484 34594 34811 35356 28612 26766 31041 31594 26480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21526000 25083 1309 23545 47126 37958 37958 1 9606 Homo sapiens 0.14564236802925734 SLSVPTDSGTTDVDYDEEQK Unmodified 2184.9546 0.95463211 1321 A0A1W2PQQ1;Q5HYW2;A0A0J9YY72;A0A0J9YW69;Q5HYW2-2 NHSL2 NHS-like protein 2 yes no 0 0 0 2 0 1 51.817 51.856 3 2.602E-06 15251 20230619_1881_Aki_TMTPro18x_K_F2 87.49 72.068 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25084 1321 23546 47127 37959 37959 1 9606 Homo sapiens -0.09044701627226459 SLTAEIDR Unmodified 903.46616 0.46616048 3650 P54136;E5RJM9;E5RH09 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 42.499 42.572 2 0.0021673 10716 20230619_1882_Aki_TMTPro18x_K_F3 131.03 65.779 424420 316440 372660 397610 422490 482640 464380 420090 548990 455810 470420 490690 513800 407550 405790 539840 573960 523350 391830 290480 383820 395930 436370 480100 468210 434560 551150 460050 488270 493820 517910 430220 424530 539030 547180 497440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 324950000 25085 3650 23547 47128;47129 37960;37961 37961 2 9606 Homo sapiens 0.010566041381366631 SLTANPELIDR Unmodified 1227.6459 0.64591575 2170 A8QI98;Q9Y2L1;Q49AG4;G3V1J5;Q9Y2L1-2;F2Z2C0 DIS3 Exosome complex exonuclease RRP44 yes no 0 0 0 4 0 1 47.7 47.74 2 0.0028368 12954 20230619_1883_Aki_TMTPro18x_K_F4 111.27 85.371 177630 145480 177010 197160 186590 219270 204030 203750 226300 242450 251250 255270 262360 230370 182590 274960 1027400 287350 164250 133610 180150 195090 193630 219630 205440 210260 230390 243330 257010 257740 264880 240800 233800 276010 969750 275510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 120470000 25086 2170 23548 47130 37962;37963 37962 2 9606 Homo sapiens 0.041198633552767205 SLTDQHCVHK Unmodified 1223.5717 0.57170495 4247 Q8ND04-3;Q8ND04;Q8ND04-2;J3QKP6;J3KTD7 SMG8 Protein SMG8 yes no 0 0 0 6 0 1 33.104 33.145 4 0.00067089 6946 20230619_1886_Aki_TMTPro18x_K_F6 104.82 78.151 27050 16508 26319 29307 33863 40869 31422 30889 39228 30176 43327 61722 38158 39706 38919 28894 51161 52833 24967 15232 26932 28662 34553 40187 32065 32244 39636 31505 44161 60383 39204 41086 40179 30589 48843 49922 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29442000 25087 4247 23549 47131 37964 37964 1 9606 Homo sapiens -0.03113803007909155 SLTKPLAENEEGEK Unmodified 1543.773 0.77296676 1252 A0A140VKG4;Q9NRY5;B4E1J2;B3KTE4;E7ESJ7;B4DQT0 FAM114A2 Protein FAM114A2 yes no 0 0 1 4 0 1 44.635 44.679 3 4.2295E-06 11589 20230619_1883_Aki_TMTPro18x_K_F4 120.49 107.29 72640 52242 67199 66107 68525 82947 76952 73131 67802 79313 96628 73038 73047 56512 88689 54346 66214 42862 67076 47968 68741 65844 71333 82349 76851 75549 70738 79599 96628 73897 75948 58735 88472 54143 63409 40918 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45213000 25088 1252 23550 47132 37965 37965 1 9606 Homo sapiens 0.022831197189361774 SLTNDWEDHLAVK Unmodified 1526.7365 0.73652168 751;3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7;A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50 EL52;HSP90AA1;HSP90AB1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 4.67 1.41 1 1 1 4 1 1 57.141 57.196 3 8.4845E-16 15262 20230619_1885_Aki_TMTPro18x_K_F5 207.64 159.53 6186900 5336300 6190600 6359400 5346900 6680600 6189300 6174000 6196000 8243200 6934300 7424200 8220300 6496200 5928200 8888200 5620400 8578800 5722800 4893300 6277300 6343400 5648200 6718900 6195600 6397600 6354200 8191000 7137500 7540600 8234600 6861200 6069500 8866500 5401100 8140600 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 33643000000 25089 3177;751 23551 47133;47134;47135;47136;47137;47138;47139;47140;47141 37966;37967;37968;37969;37970;37971;37972 37967 7 9606 Homo sapiens -0.005777123871212098 SLTQTFATVEVGR Unmodified 1407.7358 0.73579339 4046 Q5QJE6;J3KP30;B7Z854 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 yes no 0 0 0 8 0 1 54.944 55.011 2 7.0898E-16 15713 20230619_1888_Aki_TMTPro18x_K_F8 216.03 146.85 81863 68422 70043 87835 72213 85412 85681 88666 95655 90116 89610 88112 100890 81948 86208 98548 100780 103470 75616 62796 72287 87055 75276 86607 85921 90401 96649 90940 92704 89356 101900 85649 88792 99004 96304 98219 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79447000 25090 4046 23552 47142 37973 37973 1 9606 Homo sapiens 0.048234929638283575 SLTSWTNDQGAR Unmodified 1334.6215 0.62149192 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;A0A7P0T8C6;Q7Z2W4-3;Q05DV5 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 0 6 0.816 1 1 1 46.201 46.284 2 9.2266E-51 11816 20230619_1887_Aki_TMTPro18x_K_F7 315.91 275.85 110700 96551 101950 100610 107980 129030 123290 114650 129290 135450 123920 115040 140180 116110 114350 132490 137650 131790 102340 88425 104400 101700 112180 128010 123590 118660 131250 135180 128040 117760 141320 120650 118110 132800 131440 125210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135240000 25091 2740 23553 47143;47144;47145 37974;37975 37975 2 9606 Homo sapiens -0.03243396798256981 SLTTSQYLMHEVAK Oxidation (M) 1622.7974 0.79740737 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;Q9NZB2-5;Q9NZB2-2;A0A0C4DH52 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 1 0 8 0 1 46.864 46.913 3 0.00017855 12259 20230619_1888_Aki_TMTPro18x_K_F8 94.023 82.047 41835 33648 38025 43119 42230 48497 51612 49369 56630 54485 47777 54401 56657 45876 44766 63762 53327 54865 38651 30885 39049 42834 43804 48643 51629 50512 57078 54787 49863 54933 56975 48546 46309 63233 50951 52199 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16999000 25092 1839 23554 47146 37976 37976 1175 1 9606 Homo sapiens 0.010920566008053356 SLTVIPYK Unmodified 919.53787 0.53786886 4534 Q9H8H0 NOL11 Nucleolar protein 11 yes yes 0 0 0 3 0 1 54.63 54.677 2 0.00043896 16239 20230619_1882_Aki_TMTPro18x_K_F3 178.08 61.541 152810 119510 138940 143330 139080 166250 144780 144990 161350 173120 166950 156970 199790 145380 150550 209910 187870 188390 141150 109640 142330 143100 144750 165880 146220 150330 163800 172970 172350 159820 200390 153870 156350 208500 179390 179160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 298080000 25093 4534 23555 47147 37977 37977 1 9606 Homo sapiens 0.07488143562670757 SLVASLAEPDFVVTDFAK Unmodified 1907.988 0.98804492 134 A0A024R1A3;P22314-2;P22314 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 6.5 0.5 1 1 64.711 64.746 4 2.6175E-14 19970 20230619_1887_Aki_TMTPro18x_K_F7 166.92 162.3 74013 63516 71772 69912 65042 72707 71035 78842 68085 93419 86050 90812 89011 86263 93199 101680 85366 93918 68441 58201 72977 70163 68245 73473 71257 80479 70377 93488 87637 92140 91001 89892 94318 101480 81812 89254 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 267760000 25094 134 23556 47148;47149 37978 37978 1 9606 Homo sapiens 0.07037041463854621 SLVDLGK Acetyl (Protein N-term) 772.43307 0.43306943 353 H9ZYI9;A0A024R5R5;B7Z726;A0A024R5X6;Q06547-4;Q06547-3;Q06547-2;Q06547;H0YNZ0;B4DXA3;Q5SZG2;B2R924;Q8TAK5 GABPB1;GABPB2 GA-binding protein subunit beta-1;GA-binding protein subunit beta-2 yes no 1 0 0 3 0 1 59.131 59.161 2 0.00070831 18068 20230619_1882_Aki_TMTPro18x_K_F3 59.205 31.099 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25095 353 23557 47150 37979 37979 1 9606 Homo sapiens 0.03775022086085755 SLVDLTAVDVPTR Unmodified 1384.7562 0.75619449 3307 O75489;Q9UF24;Q53FM7;E9PS48;O75489-2 NDUFS3;DKFZp586K0821 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes no 0 0 0 6 0 1 59.289 59.351 2 2.2067E-06 17807 20230619_1886_Aki_TMTPro18x_K_F6 175.74 146 113790 91945 107090 122490 121020 146890 122730 133590 145080 141810 138490 147850 169020 141870 132230 158660 149280 171020 105160 84429 109660 121470 124800 146320 124370 137570 146340 143080 143770 149600 169780 147470 136200 159790 142810 162230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 448510000 25096 3307 23558 47151 37980 37980 1 9606 Homo sapiens 0.07920663623622204 SLVDTVYALK Unmodified 1107.6176 0.61757574 785 Q14155-5;A0A8V8TQ72;Q14155-1;A0A2R8YG42;B7Z6G2;B1ALK7;A0A024RDY9;B7Z3C7;Q8N4Q3;A0A2X0SSH0;Q15052-2;Q15052 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 yes no 0 0 0 1 0 1 61.977 61.977 3 0.0023335 19329 20230619_1880_Aki_TMTPro18x_K_F1 82.749 63.137 11995 9314 11303 12327 12023 13182 14087 12355 13191 14458 15008 15308 16963 13980 15596 18130 16959 15959 11082 8553.3 11558 12211 12482 13246 14055 12742 13569 14524 15403 15462 17183 14682 15972 18024 16206 15184 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37076000 25097 785 23559 47152 37981 37981 1 9606 Homo sapiens 0.0680716544597999 SLVDYENANK Unmodified 1151.5459 0.54586736 2117 A8K885;Q9UNH7;A0A0A0MRI2;B4DJS7;Q9UNH7-2;Q5QTQ6 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 47.51 47.57 3 0.00019639 12867 20230619_1883_Aki_TMTPro18x_K_F4 118.67 103.41 114780 97001 119890 114740 129710 122640 131570 131590 168480 138080 155750 160660 171670 138480 142590 169940 173160 176110 106200 88948 121450 114580 133880 123690 133700 133990 168960 139940 161100 161360 173300 145270 147350 170530 165400 167190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161760000 25098 2117 23560 47153;47154 37982 37982 1 9606 Homo sapiens -0.02384373978543408 SLVEASSSGVSVLSLCEK Unmodified 1850.9295 0.92954376 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;F8VR77;F8W0A3;H0YIN7 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 8 0 1 61.292 61.324 3 4.3412E-14 18323 20230619_1888_Aki_TMTPro18x_K_F8 162.41 145.67 219430 168770 199670 212380 205540 198440 246170 212230 203130 225490 203090 214950 251330 202930 212650 269370 271030 230270 202670 154910 204620 210750 213770 202130 244480 216360 209600 226780 210620 218340 253130 213240 220430 267270 258470 219280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 501730000 25099 654 23561 47155 37983 37983 1 9606 Homo sapiens 0.038116168271471906 SLVEIADTVPK Unmodified 1170.6496 0.64960415 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6 IPO5;RANBP5 Importin-5 yes no 0 0 0 5 0.816 2 2 2 58.41 58.453 2;3 1.5272E-08 17254 20230619_1885_Aki_TMTPro18x_K_F5 177.78 117.76 71061 62420 69066 71721 59112 62431 65159 68340 75263 88865 75616 84308 87372 69685 83732 94121 80407 95657 65723 57215 70179 71576 62344 64006 65706 69961 76225 88530 78153 85258 88588 73690 85089 94240 77070 90783 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 585950000 25100 782 23562 47156;47157;47158;47159;47160;47161 37984;37985 37984 2 9606 Homo sapiens 0.07110533129116448 SLVESVSSSPNK Unmodified 1232.6248 0.62484596 4504;1998 A8K0P2;Q9H2U2-6;Q9H2U2-3;Q9H2U2-4;Q9H2U2;Q9H2U2-2 PPA2 Inorganic pyrophosphatase 2, mitochondrial no no 0 0 0 7 0 1 46.235 46.323 2 2.2807E-07 11877 20230619_1887_Aki_TMTPro18x_K_F7 140.16 106.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25101 1998;4504 23563 47162 37986 37986 1 9606 Homo sapiens 0.017838532557561848 SLVFEDDLR Unmodified 1092.5451 0.54513908 4243 Q8NBJ5;M0QX72;Q8WUI9;Q9H6F1;Q6IPW8 COLGALT1;GLT25D1 Procollagen galactosyltransferase 1 yes no 0 0 0 2 0 1 54.69 54.714 2 0.0027476 16449 20230619_1881_Aki_TMTPro18x_K_F2 103.55 50.376 179430 155340 164210 186900 171060 203040 195440 188350 215650 221710 212880 227510 235640 200910 222530 249390 219930 255430 165860 142460 168350 186350 177940 203740 196270 194360 218550 222460 219670 229770 239140 210700 226530 250090 210700 242410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 332030000 25102 4243 23564 47163 37987 37987 1 9606 Homo sapiens 0.002568313724168547 SLVGATYVER Unmodified 1093.5768 0.57677356 4214 Q8N9J5;Q8IYQ7 THNSL1 Threonine synthase-like 1 yes no 0 0 0 6 0 1 45.383 45.469 2 0.0018897 11892 20230619_1886_Aki_TMTPro18x_K_F6 100.25 58.369 115180 84253 116560 113340 125680 121020 131090 131250 162160 125990 130680 132470 127550 122490 132100 138650 164480 143440 106440 77405 118390 112200 129870 122050 132810 133230 162080 127870 135460 133870 130660 127470 136060 139340 156920 136270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63595000 25103 4214 23565 47164 37988 37988 1 9606 Homo sapiens 0.03372824126381602 SLVIPEK Acetyl (Protein N-term) 826.48002 0.48001963 3710 P62269;A0A0G2JQH2;Q5GGW2 RPS18 40S ribosomal protein S18 yes no 1 0 0 4 1.41 1 1 1 1 1 57.547 57.583 2 0.013158 17265 20230619_1883_Aki_TMTPro18x_K_F4 57.559 38.828 520650 431550 485510 538180 516780 615420 580610 579700 676300 649110 650950 653660 720860 584830 566330 742350 718270 707070 481200 395960 497000 535700 536550 615510 584660 596510 682650 652520 671990 661200 726110 613970 587950 740970 685690 671990 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2424700000 25104 3710 23566 47165;47166;47167;47168;47169 37989;37990 37990 2 9606 Homo sapiens 0.05983881637223476 SLVLDTK Unmodified 774.44872 0.4487195 1222 A0A140VK27;P09960;P09960-2;Q59ES1;B4DEH5 LTA4H Leukotriene A-4 hydrolase yes no 0 0 0 6.5 0.5 1 1 48.755 48.837 2 0.056552 13063 20230619_1887_Aki_TMTPro18x_K_F7 83.265 16.583 329090 239050 293570 293920 360940 383790 386770 323590 418780 408870 466940 469510 390030 355140 406430 487170 531340 479230 303810 219420 302210 293500 370220 379950 389290 337160 426620 410530 473520 470090 401600 376900 420320 486740 506810 455450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 259900000 25105 1222 23567 47170;47171 37991 37991 1 9606 Homo sapiens 0.05247308603145484 SLVLNDLLICCR Acetyl (Protein N-term) 1516.7742 0.77416951 236 A0A024R3C7;Q13315;E9PIN0;A0A6Q8PH76;E9PRG7;Q6P7P1;M0QXY8;A0A087X0E9;A0A804HL86 ATM Serine-protein kinase ATM yes no 1 0 0 7 0 1 66.648 66.671 2 4.7961E-58 20774 20230619_1887_Aki_TMTPro18x_K_F7 189.7 172.38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25106 236 23568 47172 37992 37992 1 9606 Homo sapiens 0.03645339282547866 SLVNLGGSK Unmodified 873.49198 0.4919813 2778 H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 2 0 1 48.675 48.74 2 0.00037733 13875 20230619_1881_Aki_TMTPro18x_K_F2 137.98 62.666 + 29779 34363 80290 73324 1125100 110540 242400 56945 184000 16635 45194 65940 38661 112870 36061 41696 138090 36387 27993 31724 91452 71217 1053100 110870 292870 61402 186040 21017 52846 66271 40309 110680 42322 42812 130430 34990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106440000 25107 2778 23569 47173 37993 37993 1 9606 Homo sapiens 0.05017498380436791 SLVQEMVGSFGK Unmodified 1280.6435 0.64347291 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9;O75643-2;Q5ZF01 SNRNP200;ASCC3L1 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 2.5 0.5 1 1 63.088 63.108 3 0.00011917 19989 20230619_1881_Aki_TMTPro18x_K_F2 108.59 89.849 84489 72204 80175 85657 77497 94112 87493 90744 103460 91865 105850 94049 103550 88759 99014 97502 91111 90108 78113 66210 81806 85522 81074 94433 88159 92960 104530 92878 108310 95255 105530 92179 100320 97451 87244 85667 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 203120000 25108 3312 23570 47174;47175 37994 37994 1 9606 Homo sapiens 0.014376916259607242 SLVSVTK Unmodified 732.43815 0.43815481 751;4018 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9;Q58FF7;Q58FF8 HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 no no 0 0 0 2 0.816 1 1 1 46.084 46.137 3 0.001928 12778 20230619_1880_Aki_TMTPro18x_K_F1 130 35.739 421690 296350 351730 351000 414420 427030 382030 390350 511820 490230 523280 489850 576240 450700 444910 569970 560780 475460 389050 271960 363970 351060 424810 425350 391150 403870 514620 490230 538230 496220 580000 472540 461770 565250 534840 452910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1800399999.9999998 25109 751;4018 23571 47176;47177;47178 37995;37996 37995 2 9606 Homo sapiens 0.061233259487039504 SLWNDPGIQECYDR Unmodified 1751.7573 0.75733347 186 A0A024R240;P50148;G9FP35;B1AM21 GNAQ Guanine nucleotide-binding protein G(q) subunit alpha yes no 0 0 0 3.33 0.471 2 1 54.86 54.889 2;3 4.7217E-11 16172 20230619_1883_Aki_TMTPro18x_K_F4 171.32 154.3 16883 12957 12928 14198 9855.1 12817 11389 12298 11194 14811 15123 17493 17387 16211 18150 18910 18486 21130 15575 11877 13422 14223 10545 13055 11403 12671 11589 14908 15454 17590 17718 16903 18466 19081 17703 20036 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23542000 25110 186 23572 47179;47180;47181 37997;37998 37998 2 9606 Homo sapiens -0.08847490069751984 SLYASSPGGVYATR Unmodified 1427.7045 0.70449327 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;A0A1B0GVG8 VIM;HEL113 Vimentin yes no 0 0 0 3.5 2.69 1 1 1 1 45.751 45.8 2 8.3688E-16 12192 20230619_1882_Aki_TMTPro18x_K_F3 244.71 202.37 1434200 1151600 1278800 1127400 2503300 3056400 2056000 2175900 2248300 2060500 1960000 1885900 2091700 1750100 2094000 2162000 2000800 1838000 1324800 1054400 1330200 1165900 2494000 2923200 2104000 2277500 2269300 2084400 2030400 1918500 2130500 1831300 2124400 2148000 1914100 1749800 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6252899999.999999 25111 3414 23573 47182;47183;47184;47185 37999;38000;38001;38002;38003;38004 38003 6 9606 Homo sapiens 0.007749199297677478 SLYDDLGVETSDSK Acetyl (Protein N-term) 1569.7046 0.70461243 4084 Q5W009;Q96I25;Q5W011;Q5W010 RBM17 Splicing factor 45 yes no 1 0 0 1 0 1 62.163 62.163 2 1.4796E-11 19362 20230619_1880_Aki_TMTPro18x_K_F1 82.171 71.647 36502 21806 30900 32437 31197 40511 29600 31136 42878 38596 41359 43994 45978 46066 38545 56028 46364 47974 33653 20075 31869 31970 32430 40110 30361 32654 42866 38805 42715 44512 46483 47926 39856 55644 44296 45646 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85000000 25112 4084 23574 47186 38005 38005 1 9606 Homo sapiens -0.05745169651549986 SLYDEVAAQGEVVR Unmodified 1534.7627 0.76273643 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 2.5 0.5 1 1 53.897 53.937 3 1.332E-11 15915 20230619_1882_Aki_TMTPro18x_K_F3 171.36 149.99 111070 88696 103180 119250 88598 111590 115850 113760 133660 106600 108630 110900 122020 95073 113560 114410 106840 119070 102630 81458 105370 117790 94054 113420 115770 115930 134070 108290 113240 111860 123640 99665 115270 114920 102370 112990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 319630000 25113 3402 23575 47187;47188 38006;38007 38007 2 9606 Homo sapiens 0.01674556784359993 SLYDEVAAQGEVVRK Unmodified 1662.8577 0.85769944 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 1 6 0 1 51.65 51.727 3 8.0797E-15 14622 20230619_1886_Aki_TMTPro18x_K_F6 191.96 157.91 252850 243630 237900 229960 245490 233990 240360 264150 222180 299220 295080 271190 309610 253050 312440 342860 298980 294510 233950 222870 242900 233690 253910 237290 242320 268600 230700 299440 299890 276150 315530 266380 317090 340320 286160 280260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 287900000 25114 3402 23576 47189 38008 38008 1 9606 Homo sapiens 0.05278490255523138 SLYDSLIK Unmodified 937.51205 0.51204804 2857 Q3V6T2;D6W5D1;Q3V6T2-2;A0A2U3TZV9;A0A2R8Y7B1;Q3V6T2-3;Q3V6T2-4;Q3V6T2-5;A0A2R8YG73;A0A2R8Y4X4;A0A2R8Y4W8;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y885;A0A2R8YDS8;A0A2R8Y7D4;H7C2C6;H0Y470;Q9ULK8;H0Y7U8;A0A2R8Y5D7;Q9NW05 CCDC88A;KIAA1212 Girdin yes no 0 0 0 8 0 1 57.374 57.426 3 0.0032169 16755 20230619_1888_Aki_TMTPro18x_K_F8 96.711 53.684 26763 24967 23872 28231 25879 26404 28501 29780 28825 31021 32848 32180 36539 30841 31088 37316 32958 31176 24746 22877 24545 28225 26776 26930 28605 30224 29523 31311 33669 32587 36911 32190 31845 37038 31504 29683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20341000 25115 2857 23577 47190 38009 38009 1 9606 Homo sapiens 0.040792493203980484 SLYPSLEDLK Acetyl (Protein N-term) 1205.618 0.61796967 481 A0A024R7Z5;O00560-3;O00560;O00560-2;B4DHN5;E9PBU7;B4DQ93 SDCBP Syntenin-1 yes no 1 0 0 4 0.816 1 1 1 64.158 64.178 2 4.1132E-05 19838 20230619_1885_Aki_TMTPro18x_K_F5 90.657 59.938 110210 89422 86156 110570 86405 114300 104410 104200 118080 138990 133090 132630 179040 133950 122490 189900 159600 163030 101720 82047 89697 109940 90437 115030 104670 108090 120270 138400 137790 135090 178480 141150 127970 188210 152370 155120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 406770000 25116 481 23578 47191;47192;47193 38010;38011;38012 38012 3 9606 Homo sapiens 0.023385403751944978 SLYQSAGVAPESFEYIEAHGTGTK Unmodified 2541.2023 0.2023478 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 6.2 0.748 1 2 2 57.755 57.815 3;4 4.7928E-27 17231 20230619_1886_Aki_TMTPro18x_K_F6 192.47 172.5 199230 162320 209420 199130 129730 137610 143330 166660 130330 195620 200800 202490 187420 147170 159590 201050 199250 245280 184300 148920 210550 197380 141310 144560 143680 169080 136570 196110 202110 203350 190290 156620 165210 203480 190570 232330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 459690000 25117 3606 23579 47194;47195;47196;47197;47198 38013;38014;38015 38014 3 9606 Homo sapiens -0.0066052796878466324 SLYTDESSKPGK Unmodified 1310.6354 0.63541065 2039 A8K4B4;Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YMD2 NUSAP1 Nucleolar and spindle-associated protein 1 yes no 0 0 1 7 0 1 42.154 42.229 3 3.3446E-07 10173 20230619_1887_Aki_TMTPro18x_K_F7 160.86 149.91 92004 75061 80650 80758 58126 78229 71599 60560 86023 107450 121780 93957 116940 90585 76821 109580 103520 69850 84985 68779 82536 81084 62685 78909 71907 64395 88290 105680 122790 95962 117530 94542 80468 107520 98559 66888 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58645000 25118 2039 23580 47199 38016 38016 1 9606 Homo sapiens -0.0074816408982769644 SLYVAEYHSEPVEDEKP Unmodified 1990.916 0.91600218 2256 P26196;B2R858 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 1 2.33 1.25 1 1 1 49.235 49.267 3 2.3215E-13 14089 20230619_1881_Aki_TMTPro18x_K_F2 151.59 125.12 296310 249180 265370 291800 269440 309700 274390 273580 303090 386030 392610 375200 425450 352240 317070 456900 451290 415630 273800 228480 272350 291430 279880 311040 277420 285010 311140 383690 399790 380760 428050 369640 332490 454730 430240 395330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 298200000 25119 2256 23581 47200;47201;47202 38017;38018 38017 2 9606 Homo sapiens -0.03981917680494007 SLYYYIQQDTK Unmodified 1420.6874 0.68744622 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;A6NMY6;H0YL33;B4DNH8 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 4.5 3.04 1 1 1 1 59.066 59.092 2;3 7.1861E-17 18100 20230619_1880_Aki_TMTPro18x_K_F1 275.01 232.68 701780 558470 612710 650480 639200 722190 727180 629690 729740 930790 952470 1005200 998310 886790 921990 978540 1021700 1106700 648130 512150 630490 650350 664410 722880 728190 658050 753060 926570 969200 1012600 1014000 923530 944720 988920 977140 1049500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2218200000 25120 368 23582 47203;47204;47205;47206 38019;38020;38021 38019 3 9606 Homo sapiens -0.006070006760637625 SMAAAAASLGGPR Unmodified 1158.5815 0.58154136 557 Q6IAJ3;A0A024R967;Q6FIF9;B1ALM5;B4E1H4;Q9P0T7 TMEM9 Transmembrane protein 9 yes no 0 0 0 3 0 1 46.681 46.759 2 0.0022939 12658 20230619_1882_Aki_TMTPro18x_K_F3 92.409 76.528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25121 557 23583 47207 38022 38022 1 9606 Homo sapiens 0.008593849974658951 SMAASGNLGHTPFVDEL Unmodified 1744.809 0.80903469 3492 P22695 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 0 4 0 1 59.201 59.203 2 0.005095 17994 20230619_1883_Aki_TMTPro18x_K_F4 65.395 50.976 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25122 3492 23584 47208 38023 38023 1 9606 Homo sapiens -0.03357746375854731 SMANPPAAVK Unmodified 984.50625 0.50625115 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 8 0 1 42.301 42.304 2 0.00035971 10411 20230619_1888_Aki_TMTPro18x_K_F8 111.46 79.234 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25123 3881 23585 47209 38024 38024 1 9606 Homo sapiens 0.013378275370541814 SMDFEEAER Oxidation (M) 1128.4394 0.43935338 2268 V9HW51;B2R960;O43396;Q59G46;K7ER96;B3KT45 HEL-S-114;TXNL1 Thioredoxin-like protein 1 yes no 0 1 0 1 0 1 36.796 36.796 2 0.0011689 8686 20230619_1880_Aki_TMTPro18x_K_F1 114.89 104.18 104070 66312 78299 103750 116940 123550 120140 103050 145540 116890 120720 117340 137160 105130 107370 151520 138760 131040 95899 61069 82427 101850 118540 122930 121620 107120 145790 117500 125690 118780 138010 111320 111680 150230 132410 124710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108810000 25124 2268 23586 47210 38025 38025 1413 1 9606 Homo sapiens -0.11972872535352508 SMDFEEAER Unmodified 1112.4444 0.44443876 2268 V9HW51;B2R960;O43396;Q59G46;K7ER96;B3KT45 HEL-S-114;TXNL1 Thioredoxin-like protein 1 yes no 0 0 0 1 0 1 43.536 43.536 2 1.2412E-06 11653 20230619_1880_Aki_TMTPro18x_K_F1 191.85 170.34 144430 101360 128810 145380 138490 175140 159200 149910 185580 171630 167780 183220 217490 173910 155530 216230 212030 205940 133310 93201 132440 143510 143880 174160 160090 155500 186900 172720 175200 185180 217440 181970 162690 215850 202280 195730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136170000 25125 2268 23586 47211 38026 38026 1 9606 Homo sapiens -0.1072856867272094 SMEAEMIQLQEELAAAER Unmodified 2047.9554 0.95544093 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4 MYH9;FLJ00279 Myosin-9 yes no 0 0 0 3 0 1 64.543 64.575 3 6.2058E-05 20371 20230619_1882_Aki_TMTPro18x_K_F3 91.589 80.319 38644 33707 42849 36412 24220 36685 30825 32589 33952 41153 36538 37453 38566 36791 31760 43235 43682 47092 35780 30880 42861 36584 26880 36973 30844 33806 34555 41012 37455 38160 39012 38309 33138 43523 41703 44675 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22700000 25126 148 23587 47212 38027 38027 1 9606 Homo sapiens -0.02661856992858702 SMEDPFFVVK Acetyl (Protein N-term) 1239.5846 0.58456105 3264 O43752 STX6 Syntaxin-6 yes yes 1 0 0 3.5 0.5 1 1 65.416 65.428 2 4.1132E-05 20725 20230619_1882_Aki_TMTPro18x_K_F3 67.125 59.919 8512.9 6866.4 8057.6 8370.6 7462.6 7268.4 7562.7 9748.5 7451.4 9246.4 9213.7 10359 9705.1 8415.8 12733 11309 10030 10965 7867.4 6299.3 8213.3 8320 7793.2 7493.4 7627.9 9769.1 7677.9 9395.1 9408.4 10400 10031 8895.9 12738 11304 9629.4 10415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16200000 25127 3264 23588 47213;47214 38028;38029 38028 2 9606 Homo sapiens -0.025647846683568787 SMEEDPQTSR Unmodified 1178.4874 0.4873662 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 1 0 1 32.209 32.209 2 1.4312E-06 6842 20230619_1880_Aki_TMTPro18x_K_F1 173.37 162.66 27436 12519 29844 34720 47149 56585 31670 42186 37755 29313 48381 52146 47651 44538 46995 19226 63720 54108 25317 11664 30406 33457 47231 55160 33058 43717 38506 31029 49136 51596 48660 44877 48555 21777 60738 51057 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52281000 25128 3758 23589 47215 38030 38030 1 9606 Homo sapiens -0.09473798615317719 SMENYYQESGR Oxidation (M) 1378.5459 0.54594371 635 A0A024RAV2;P46063 RECQL ATP-dependent DNA helicase Q1 yes no 0 1 0 2.5 0.5 1 1 34.401 34.46 2 5.3693E-05 7430 20230619_1881_Aki_TMTPro18x_K_F2 140.48 131.78 77606 55268 59673 69500 94449 99742 93701 94061 102370 86986 98930 95955 105480 86865 91412 99625 106870 102110 71564 50746 62702 69399 95340 98429 94745 96259 103630 88593 101930 96741 106770 90591 94096 100030 102070 96980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102870000 25129 635 23590 47216;47217 38031;38032 38031 376 2 9606 Homo sapiens -0.1281874204084943 SMENYYQESGR Unmodified 1362.551 0.55102909 635 A0A024RAV2;P46063 RECQL ATP-dependent DNA helicase Q1 yes no 0 0 0 3 0 1 40.942 41.001 2 0.00011667 10051 20230619_1882_Aki_TMTPro18x_K_F3 136.48 113.79 123550 100870 122970 124890 130320 156920 150270 132370 162470 163060 175750 170030 188440 148880 141310 185900 204140 191240 114240 92548 125120 124560 135410 155650 150710 137780 165370 163390 180160 171620 189660 156290 148230 186380 194620 181630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 288910000 25130 635 23590 47218 38033;38034 38034 2 9606 Homo sapiens -0.11574438178217861 SMEVSTQLAR Oxidation (M) 1136.5496 0.54957253 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 1 0 5 0 1 36.323 36.414 2 0.00010846 8045 20230619_1885_Aki_TMTPro18x_K_F5 140.84 127.85 48027 31941 39797 46327 46529 45892 44296 39968 52258 46168 56121 49973 55619 43236 45207 54435 57245 56909 44294 29382 41241 45571 47726 46309 45036 41437 52917 46464 57320 50369 56266 45435 46867 54631 54653 54027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39657000 25131 4191 23591 47219 38035 38035 2700 1 9606 Homo sapiens -0.013240274763120397 SMEVSTQLAR Unmodified 1120.5547 0.55465791 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 5.5 0.5 1 1 42.499 42.588 2 2.0598E-05 10566 20230619_1886_Aki_TMTPro18x_K_F6 160.16 94.091 132910 107700 124630 126360 116110 138070 127010 123650 143340 151760 158330 162180 181560 143290 141190 171290 186090 165000 122830 98767 127180 126250 121680 138400 127980 128090 145770 152180 162750 163530 182600 149950 146910 171250 177470 156860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 111540000 25132 4191 23591 47220;47221 38036;38037 38037 2 9606 Homo sapiens -0.0007972361368047132 SMFAGVPTMR Unmodified 1095.5205 0.52052101 3239 Q5T8U5;Q5T8U7;O15260-2;O15260;B7Z8F3;B7Z7A8;B7Z1G8 SURF4 Surfeit locus protein 4 yes no 0 0 0 4 0 1 53.495 53.514 2 0.00058896 15601 20230619_1883_Aki_TMTPro18x_K_F4 120.31 98.175 161440 144250 161580 156600 112560 188480 195720 193630 223200 186140 167850 171830 223710 177490 194690 200250 195180 209950 149370 132150 163480 157650 123530 188150 193330 197210 223530 188180 177320 175310 225100 184210 198540 201410 186840 199250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200100000 25133 3239 23592 47222 38038 38038 1 9606 Homo sapiens -0.023418433062943222 SMFLQMGTTAGPSGEAGGGAGLAEAPR Unmodified 2520.1737 0.17370698 4395 Q96SB3 PPP1R9B Neurabin-2 yes yes 0 0 0 7.5 0.5 1 1 59.43 59.474 3 2.9436E-09 17610 20230619_1887_Aki_TMTPro18x_K_F7 114.21 100.38 15479 11623 11905 14564 13828 13330 16363 14613 15211 17220 14716 16174 15962 11954 18428 17195 13866 18997 14278 10669 12435 14449 14266 13609 16310 14917 15559 17222 15197 16315 16352 12760 18439 17298 13346 18006 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16712000 25134 4395 23593 47223;47224 38039 38039 1 9606 Homo sapiens -0.025572921412276628 SMGFIGHYLDQK Oxidation (M) 1410.6602 0.66018561 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 1 0 1 0 1 50.242 50.242 3 0.00014035 14440 20230619_1880_Aki_TMTPro18x_K_F1 100.22 77.69 56225 50696 59659 55421 58364 44824 46326 56840 55457 66551 62476 63155 61679 46813 58661 70695 69724 69438 52049 46442 60228 55497 60255 46488 47770 57476 56345 66579 63739 63715 62803 50121 60382 70545 66602 65967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121820000 25135 161 23594 47225 38040 38040 100 1 9606 Homo sapiens -0.028718074880998756 SMGFIGHYLDQK Unmodified 1394.6653 0.66527099 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 2 0 1 56.008 56.026 3 1.874E-05 17001 20230619_1881_Aki_TMTPro18x_K_F2 125.61 93.972 317460 259780 334910 294550 193380 268610 278150 249750 240310 360040 317990 339960 361240 312650 329350 382230 362010 375930 293680 238150 336420 294460 214590 273150 274670 259570 250620 357130 324720 344970 365820 327090 337570 382490 346150 357080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 520300000 25136 161 23594 47226 38041 38041 1 9606 Homo sapiens -0.016275036254683073 SMGLPTSDEQK Oxidation (M) 1207.5391 0.53906742 4703 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 1 0 3.5 0.5 1 1 39.885 39.935 2 0.0024721 9561 20230619_1882_Aki_TMTPro18x_K_F3 91.658 72.68 56276 37598 45409 50762 59128 66241 51365 56321 70338 57401 66483 71752 75719 54595 60897 69290 74679 68865 51894 34557 47266 50363 60197 65566 52835 58236 70404 58415 68813 71608 76227 57690 62987 69348 71279 65435 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65196000 25137 4703 23595 47227;47228 38042 38042 2869 1 9606 Homo sapiens -0.05640054921423143 SMGLPTSDEQK Unmodified 1191.5442 0.5441528 4703 Q9Y266 NUDC Nuclear migration protein nudC yes yes 0 0 0 4 0.816 1 1 1 45.458 45.518 2;3 7.7802E-13 11933 20230619_1883_Aki_TMTPro18x_K_F4 211.86 173.11 238390 195900 207180 237500 246780 300680 269420 253330 353980 273380 275080 276940 293990 245830 285030 324110 329100 274470 220200 179690 213890 237200 254250 298090 272790 262630 352480 275560 286800 280030 299100 258680 292620 321570 314070 261420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 424270000 25138 4703 23595 47229;47230;47231 38043;38044;38045 38044 3 9606 Homo sapiens -0.04395751058814312 SMGSQEDDSGNKPSSYS Oxidation (M) 1790.6901 0.69010135 4692 Q9UNS2;B4DN01;H7C3P9;Q9UNS2-2 COPS3 COP9 signalosome complex subunit 3 yes no 0 1 1 2.5 0.5 1 1 36.304 36.36 3 5.9193E-06 8223 20230619_1881_Aki_TMTPro18x_K_F2 101.78 97.755 15454 11071 12648 18273 17256 20528 19310 19591 22437 24145 28008 25758 22383 23100 22175 24789 24303 21877 14258 10198 13191 17871 17636 20551 19444 20199 22899 24205 28210 25991 23039 23980 22685 24719 23216 20818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56946000 25139 4692 23596 47232;47233 38046 38046 2859 1 9606 Homo sapiens -0.1736160986199593 SMIEISR Unmodified 834.42694 0.4269382 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2;E9PRC8;Q5SZX6;Q5SZX9;E9PM09;Q5SZW8 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 6 0.816 1 1 1 43.443 43.527 2 0.013493 11001 20230619_1886_Aki_TMTPro18x_K_F6 113.89 35.273 708810 635240 651120 673010 669190 774520 671920 653890 844130 823940 789680 907650 948860 751240 714430 929080 987360 938590 655370 581800 666610 678130 694460 772980 682750 681020 848470 826300 820280 911890 952150 789700 746800 930680 941720 891560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 907820000 25140 2435 23597 47234;47235;47236 38047;38048 38048 2 9606 Homo sapiens 0.003101805829260229 SMLAALIAAQATALNR Unmodified 1613.8923 0.89231081 864 A0A087WZ13;E9PAU2;Q8IY67-2;Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 yes no 0 0 0 8 0 1 65.024 65.043 3 3.5556E-19 19977 20230619_1888_Aki_TMTPro18x_K_F8 196.8 164.07 9505.2 10309 9327.3 10896 8007.2 11480 11796 11455 8982.6 12704 9979.8 11874 14280 10615 12910 10010 13132 12903 8805.7 9435.7 9484.9 10966 8534.5 11561 11589 11738 9373.4 12737 10399 12033 14361 10973 13146 10241 12561 12226 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62010000 25141 864 23598 47237 38049 38049 1 9606 Homo sapiens 0.10992034862670153 SMLDQLGVPLYAVVK Unmodified 1631.8957 0.89566485 4423 Q9BRX8-2;Q9BRX8 FAM213A Redox-regulatory protein FAM213A yes no 0 0 0 3 0 1 64.544 64.576 3 5.3812E-06 20366 20230619_1882_Aki_TMTPro18x_K_F3 117.08 93.476 70155 58628 70080 55979 55735 72184 80546 78616 82028 62437 59438 45449 64866 49561 72110 71396 57605 54209 64878 53663 70920 57054 59757 71909 79816 79403 82516 63482 62228 47154 66331 52161 72394 70440 55232 51683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83714000 25142 4423 23599 47238 38050 38050 1 9606 Homo sapiens 0.10499284916659235 SMLQATAEANNLAAVAGAR Unmodified 1857.9367 0.93669482 4257 Q8NHH9-2;Q8NHH9;B7Z2H0;B5MCN0;Q8NHH9-3;Q8NHH9-5;Q8NHH9-4 ATL2 Atlastin-2 yes no 0 0 0 1 0 1 58.698 58.698 3 1.4484E-19 17969 20230619_1880_Aki_TMTPro18x_K_F1 178.99 160.3 24163 17655 22728 23535 19920 28224 23988 24369 31043 27875 29765 29292 35208 28711 29246 32977 33356 35813 22317 16218 23177 23341 21087 28076 24174 25254 31168 28042 30829 29663 35472 29873 30092 33218 31892 33976 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251730000 25143 4257 23600 47239 38051 38051 1 9606 Homo sapiens 0.04204394218209018 SMMNLQTK Unmodified 951.45177 0.45177274 2724 P11387;B9EG90;A0A7P0T852;Q9BVT2 TOP1 DNA topoisomerase 1 yes no 0 0 0 2 0 1 46.933 47.009 2 0.0415 13073 20230619_1881_Aki_TMTPro18x_K_F2 72.243 25.249 158440 120260 124950 133010 160210 197310 154450 143820 208710 95847 85783 68807 81680 74090 124840 92157 101840 56328 146180 110250 130310 134110 163820 193370 157590 149330 204320 98921 93596 71373 85629 77152 124720 90445 97351 54048 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67478000 25144 2724 23601 47240 38052 38052 1 9606 Homo sapiens -0.02589507606001007 SMMSAYER Oxidation (M) 989.39465 0.39465179 3474 P18583-5;P18583-9;P18583;P18583-7;P18583-4;P18583-3;P18583-10;P18583-6;P18583-2;H7C1M2 SON Protein SON yes no 0 1 0 3.5 0.5 1 1 34.399 34.455 2 0.023167 7234 20230619_1883_Aki_TMTPro18x_K_F4 79.713 35.596 33829 27073 28898 28375 36825 37534 34756 31200 46623 27957 31738 29554 26623 25500 31676 35460 35017 23308 31239 24803 29878 28681 37577 37133 35506 32232 46167 28524 33033 29824 27608 26927 32324 34789 33391 22310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35985000 25145 3474 23602 47241;47242 38053 38053 2118 1 9606 Homo sapiens -0.100469748823798 SMMSSYSAADR Oxidation (M) 1220.4802 0.48017233 3474 P18583-5;P18583-9;P18583;P18583-7;P18583-4;P18583-3;P18583-10;P18583-6;P18583-2;H7C1M2 SON Protein SON yes no 0 1 0 4 0 1 34.663 34.714 2 0.050968 7393 20230619_1883_Aki_TMTPro18x_K_F4 61.593 53.053 27599 20419 29965 26306 32265 31648 31435 33838 33558 31993 32103 31276 32941 26153 28355 28651 31564 30319 25523 18750 30249 26166 33270 31654 31825 34351 34019 32403 33035 31605 33363 27292 29092 28848 30160 28784 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24870000 25146 3474 23603 47243 38054 38054 2119 1 9606 Homo sapiens -0.12124854487387893 SMMSSYSAADR Unmodified 1204.4853 0.48525771 3474 P18583-5;P18583-9;P18583;P18583-7;P18583-4;P18583-3;P18583-10;P18583-6;P18583-2;H7C1M2 SON Protein SON yes no 0 0 0 6 0 1 40.674 40.766 2 0.0029061 9845 20230619_1886_Aki_TMTPro18x_K_F6 98.044 83.375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25147 3474 23603 47244 38055 38055 1 9606 Homo sapiens -0.10880550624779062 SMNSALGK Unmodified 806.39564 0.39563807 71 A0A024QZY1;Q13155;B2R7M3;Q13155-2;A8MU58 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes no 0 0 0 4.5 3.5 1 1 42.58 42.58 2 0.0032786 11229 20230619_1880_Aki_TMTPro18x_K_F1 119.86 75.729 94166 52747 114550 111260 140560 174110 120590 136560 155210 85102 117820 124710 113220 95118 129590 68405 138030 114360 87058 48823 115060 108240 143560 170240 123850 140670 154410 90109 122530 123740 116490 97728 131590 71958 131820 108220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53472000 25148 71 23604 47245;47246 38056;38057 38056 2 9606 Homo sapiens -0.015303924511613332 SMNSQYLK Oxidation (M) 985.45388 0.45388123 1666 A0A7I2V4K5;B4E324;X6R5C5;Q59EV6;X6R8A1;P10619-2;P10619 CTSA;PPGB Carboxypeptidase;Lysosomal protective protein;Lysosomal protective protein 32 kDa chain;Lysosomal protective protein 20 kDa chain yes no 0 1 0 8 0 1 39.43 39.418 2 0.054321 9251 20230619_1888_Aki_TMTPro18x_K_F8 68.016 43.861 28960 19582 28296 25146 57387 62085 44122 51911 68856 6463.5 5276.6 4206.6 4660.2 4919.5 14016 6972.2 7302.9 3924.9 26744 17988 29222 25417 56990 59716 45960 52452 66025 9026.3 8386.8 4445.8 5257 5152.3 13677 6826.9 7028.8 3772.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15238000 25149 1666 23605 47247 38058 38058 1084 1 9606 Homo sapiens -0.039427555965289685 SMPEQTGEK Oxidation (M) 1021.4386 0.4386251 568 A0A024R9D3;P62888;A0A0B4J213;A0A0C4DH44 RPL30 60S ribosomal protein L30 yes no 0 1 0 2 0 1 32.19 32.25 2 0.0050465 6551 20230619_1881_Aki_TMTPro18x_K_F2 91.265 58.425 17278 8712.6 19669 19145 34586 35331 24987 32665 22670 16834 34300 33498 20547 23754 29438 8918.9 33219 29260 15957 8074.9 20000 18669 34448 34413 25706 33098 23642 18361 34051 32905 21868 24029 29869 10411 31720 27591 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12119000 25150 568 23606 47248 38059 38059 336 1 9606 Homo sapiens -0.07123667184373517 SMPEQTGEK Unmodified 1005.4437 0.44371047 568 A0A024R9D3;P62888;A0A0B4J213;A0A0C4DH44 RPL30 60S ribosomal protein L30 yes no 0 0 0 3 0.816 1 1 1 37.564 37.616 2 1.0184E-05 8637 20230619_1882_Aki_TMTPro18x_K_F3 182.39 133.89 61511 33311 82837 89106 104470 132350 80380 118690 95739 74289 117170 143030 101320 93208 109000 43704 130890 129890 56921 30979 82748 85836 106260 130040 83063 120900 97402 79520 118710 140200 104320 95221 111530 49761 125020 122460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79501000 25151 568 23606 47249;47250;47251 38060;38061 38060 2 9606 Homo sapiens -0.05879363321764686 SMPPLDQPSCK Oxidation (M) 1274.5635 0.56350803 4100 Q99961;Q9UQD4;Q6FGM0;Q99961-2;Q99961-3;Q9BVL7;Q9BWP4 SH3GL1 Endophilin-A2 yes no 0 1 0 5 0 1 40.374 40.461 3 0.0090186 9713 20230619_1885_Aki_TMTPro18x_K_F5 66.56 54.583 42676 30491 41479 44099 50177 52436 48191 51529 65933 49566 54914 53019 61081 45939 51723 52672 60922 57218 39420 28038 42378 43514 51388 52360 49251 52636 65682 50336 57106 53441 61669 48013 53268 53077 58175 54312 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31773000 25152 4100 23607 47252 38062 38062 2669 1 9606 Homo sapiens -0.06279118039537934 SMPWNVDTLSK Unmodified 1276.6122 0.61217279 437 A0A024R7B7;Q16543;Q6FG59;K7EQA9;K7EKQ2 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 0 0 1 0 1 58.941 58.941 3 6.7172E-05 18055 20230619_1880_Aki_TMTPro18x_K_F1 125.97 103.25 72485 60453 65561 68539 54414 78849 67941 76860 76760 88697 79549 77784 91077 75921 80925 93659 76662 91772 66980 55415 67046 68709 57940 78868 68041 78930 77893 88653 81981 79409 92080 79336 82310 93691 73496 87130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146940000 25153 437 23608 47253 38063 38063 1 9606 Homo sapiens -0.01506881408135996 SMQGFPFYDK Unmodified 1218.5379 0.53794521 2252 B2R802;P09012;M0R0G9;M0QXK2;M0R221;M0R2B8;M0QZG7 SNRPA U1 small nuclear ribonucleoprotein A yes no 0 0 0 1.5 0.5 1 1 59.328 59.335 2 0.00063938 18189 20230619_1880_Aki_TMTPro18x_K_F1 119.53 91.36 48976 37989 53019 53507 35712 48703 55239 56107 58956 60659 61558 63554 64785 48928 62380 66412 64759 70381 45303 34911 53281 52702 39043 49746 54706 56937 59954 61121 63200 63892 65860 51913 63630 66663 61977 66786 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48410000 25154 2252 23609 47254;47255 38064 38064 1 9606 Homo sapiens -0.06258224499651988 SMQGFPFYDK Oxidation (M) 1234.5329 0.53285983 2252 B2R802;P09012;M0R0G9;M0QXK2;M0R221;M0R2B8;M0QZG7 SNRPA U1 small nuclear ribonucleoprotein A yes no 0 1 0 8 0 1 54.503 54.57 2 0.0071167 15497 20230619_1888_Aki_TMTPro18x_K_F8 80.24 56.811 89360 75017 86782 95847 101700 93019 90376 85715 94258 100650 98093 98637 105540 89183 104640 112050 95094 106470 82622 68844 88614 95033 104000 94170 91925 88511 96050 100850 100820 99917 107410 93515 105940 111910 91156 101140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102680000 25155 2252 23609 47256 38065 38065 1399 1 9606 Homo sapiens -0.07502528362260819 SMQNHAAVFR Oxidation (M) 1175.5506 0.55057558 21 A0A024QZ30;P31040;P31040-2;B3KT34;Q0QF12;P31040-3;B3KYA5;B4DYN5 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 1 0 6 2 1 1 28.866 28.913 3 0.00053827 5294 20230619_1888_Aki_TMTPro18x_K_F8 96.143 68.13 39506 30564 39034 42292 59157 57277 49150 45440 61668 36088 47150 40596 42437 38130 44650 40393 51372 41094 36514 28082 40005 41919 59542 56517 50496 46999 61449 37179 48814 40967 43595 39522 45707 40615 49016 39062 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 19318000 25156 21 23610 47257;47258 38066;38067;38068;38069 38069 9 4 9606 Homo sapiens -0.030177683167721625 SMQPGTSLAK Oxidation (M) 1034.5066 0.50664508 4150 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 0 1 0 8 0 1 38.692 38.679 2 0.0011356 8943 20230619_1888_Aki_TMTPro18x_K_F8 106.4 78.001 39462 31856 38692 41106 60331 64109 56108 51288 72209 52788 49403 55086 58164 43994 46747 56881 63566 55154 36480 29242 39715 41037 60845 62784 57262 53313 71717 53391 52172 55425 58535 46450 48715 56828 60599 52435 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33691000 25157 4150 23611 47259 38070 38070 2675 1 9606 Homo sapiens -0.009227975337580574 SMQPGTSLAK Unmodified 1018.5117 0.51173046 4150 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 0 0 0 8 0 1 43.287 43.297 2 0.0019074 10824 20230619_1888_Aki_TMTPro18x_K_F8 99.973 59.928 11213 10987 11558 13751 13403 15012 15306 14598 19805 13954 14248 15316 15430 15636 13260 17818 19112 18640 10384 10076 11757 13673 13834 15074 15451 14928 19682 14194 14937 15502 15635 16224 13870 17903 18226 17697 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12964000 25158 4150 23611 47260 38071 38071 1 9606 Homo sapiens 0.0032150632887351094 SMSAPVIFDR Unmodified 1121.5539 0.55392963 2353 Q53GG3;B3KN57;B3KML1;O60749;D6RC15 SNX2 Sorting nexin-2 yes no 0 0 0 7.5 0.5 1 1 52.18 52.256 2 0.034384 14599 20230619_1887_Aki_TMTPro18x_K_F7 68.76 50.029 166070 140160 167360 172200 163870 178080 187100 178390 189530 199430 220280 233660 221780 199210 216990 235850 248980 261040 153600 128570 169880 171380 171040 179660 187420 182840 194200 201420 224760 234480 226160 208540 222610 237770 238000 247630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95170000 25159 2353 23612 47261;47262 38072 38072 1 9606 Homo sapiens -0.0019851826273225015 SMSHQAAIASQR Unmodified 1285.6197 0.61971778 252 Q4G0F5;A0A024R3L9 VPS26B Vacuolar protein sorting-associated protein 26B yes no 0 0 0 6 2 1 1 29.149 29.194 3 2.1375E-05 5404 20230619_1888_Aki_TMTPro18x_K_F8 102.73 80.153 11314 8279.7 14350 13884 14392 15562 16331 12818 20076 16084 15257 17535 13712 14887 15382 16108 18336 16005 10478 7627.2 14324 13574 14991 15540 16459 13385 20038 16138 15832 17631 14152 15491 15779 16163 17499 15212 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13326000 25160 252 23613 47263;47264 38073;38074 38074 2 9606 Homo sapiens -0.011667290878904168 SMSTEGLMK 2 Oxidation (M) 1014.4362 0.43618225 651 O75390;A0A024RB75;B4DJV2;B3KTN4;A0A0C4DGI3 CS Citrate synthase, mitochondrial;Citrate synthase yes no 0 2 0 4 0 1 38.017 38.059 2 0.016366 8741 20230619_1883_Aki_TMTPro18x_K_F4 62.582 33.235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25161 651 23614 47265 38075 38075 392;393 1 9606 Homo sapiens -0.07045838913700209 SMSTEGLMK Unmodified 982.44635 0.44635301 651 O75390;A0A024RB75;B4DJV2;B3KTN4;A0A0C4DGI3 CS Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 7 0 1 47.621 47.709 3 0.0035237 12517 20230619_1887_Aki_TMTPro18x_K_F7 80.676 57.119 155790 128020 151550 152420 142630 188160 175160 169580 226800 157660 182670 183760 205270 143960 168540 202540 203320 174680 144030 117410 154230 152410 150060 187050 176280 174230 226100 160910 190450 184130 206880 152980 174120 200940 194000 166310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98895000 25162 651 23614 47266 38076 38076 1 9606 Homo sapiens -0.04557231188459809 SMSVYCTPNKPSR Oxidation (M) 1541.6966 0.69664747 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 1 1 3.5 0.5 1 1 36.737 36.787 3 7.3483E-05 8298 20230619_1882_Aki_TMTPro18x_K_F3 113.54 101.96 188410 164110 184550 229720 211440 204260 224170 198850 211890 222430 258290 226150 271140 209740 223700 294360 249860 233370 174260 150730 188440 226150 217530 208410 224910 204320 218450 223630 263140 229160 273900 221360 230140 290830 238700 222360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 233320000 25163 1076 23615 47267;47268 38077;38078 38078 641 2 9606 Homo sapiens -0.05253298653701677 SMSVYCTPNKPSR Unmodified 1525.7017 0.70173285 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 0 1 4 0 1 40.766 40.809 3 4.781E-12 9874 20230619_1883_Aki_TMTPro18x_K_F4 193.34 171.79 260020 209720 263990 255820 219990 302550 274190 255410 302220 326490 324620 295590 377770 288590 305520 377130 340900 293700 240440 192400 267210 255200 233900 301180 274260 266110 307360 325260 334080 301440 380210 302650 314280 372720 325500 280010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217810000 25164 1076 23615 47269 38079 38079 1 9606 Homo sapiens -0.04008994791092846 SMTEAEQQQLIDDHFLFDK Oxidation (M) 2310.0474 0.047427063 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;G3V4N7 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 1 0 2.5 0.5 1 1 59.347 59.368 3 2.3051E-07 18190 20230619_1882_Aki_TMTPro18x_K_F3 105.79 95.102 17207 14780 12005 15323 12602 15325 15271 14187 20915 21214 22631 30017 26986 29765 19519 42856 36237 51421 15876 13536 12659 15432 13149 15477 15412 14770 21060 21340 23370 30080 27120 31382 21038 43250 34615 48693 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45337000 25165 3441 23616 47270;47271 38080 38080 2077 1 9606 Homo sapiens -0.055194753748764924 SMTEAEQQQLIDDHFLFDK Unmodified 2294.0525 0.052512441 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;G3V4N7 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 0 4.5 1.12 1 1 1 1 61.246 61.282 3 8.8118E-15 18856 20230619_1883_Aki_TMTPro18x_K_F4 159.7 142.33 43888 27119 32767 39185 18648 32128 31936 34840 46553 56568 54971 79829 92023 91993 42604 116990 114670 183530 40434 24954 34047 38475 20993 33051 31906 36003 47005 56729 57728 80420 90578 95865 48603 120590 109500 173360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 336670000 25166 3441 23616 47272;47273;47274;47275 38081;38082 38082 2 9606 Homo sapiens -0.04275171512290399 SMTPAEREENQR Unmodified 1446.6521 0.65214012 1361 E7ETD6;E9PE19;A0A2R8Y7Q1;J3QQK4;Q12830-4;Q12830-2;Q12830;J3KSK9;B4DJV8;Q9H5E0;J3QQQ8 BPTF Nucleosome-remodeling factor subunit BPTF yes no 0 0 1 2 0 1 27.676 27.753 3 1.0764E-05 4923 20230619_1881_Aki_TMTPro18x_K_F2 137.59 103.9 8100.8 6627.4 8039.6 8648.2 11585 8944.6 9526.9 11158 12425 10276 11728 10670 11646 10437 9374.3 11364 15797 12606 7490.1 6084 8223.8 8573.7 11672 9082 9817.4 11216 12462 10446 12051 10814 11792 10823 9935.9 11469 15030 11971 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14649000 25167 1361 23617 47276 38083 38083 1 9606 Homo sapiens -0.05331986475493977 SMTPAQADLEFLENAK Unmodified 1763.84 0.84000047 3431 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;P11171-5;Q4VB87;A0A994J847;Q29RX4;A0A2R8YCW8;A0A3B3ITP0;P11171-7;A0A2R8Y5Z6;A0A2R8Y7Y3;A0A2R8Y5G2;P11171-6;A0A2R8Y570;A0A2R8Y420;A0A3B3IU06;A0A2R8YFR9;A0A2R8Y6G5;A0A3B3IUD6;A0A2R8Y7N0;A0A2R8Y6D0;A0A1B0GWG0;A0A2R8Y4N6;A0A3B3ITC5;A0A2R8Y6T6 EPB41 Protein 4.1 yes no 0 0 0 5 1 1 1 62.552 62.58 3 0.0072432 19444 20230619_1883_Aki_TMTPro18x_K_F4 66.335 47.503 96570 69883 107030 105450 83714 92521 85258 93013 110880 112960 102620 119170 126060 101780 125630 132680 119550 145500 89311 64291 107470 103380 88860 94525 86761 95542 111260 113280 106840 120070 127850 107240 127470 133520 114620 137970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 98474000 25168 3431 23618 47277;47278 38084;38085 38084 2 9606 Homo sapiens -0.011365930615966136 SMVAVMDSDTTGK Unmodified 1340.5952 0.59520209 1009 A0A0C4DGQ5;P04632;K7EM73;K7EKD8;U3KQE2;K7EIV0;A0A075B7C0;U3KPR7 CAPNS1 Calpain small subunit 1 yes no 0 0 0 4.5 0.5 1 1 51.689 51.74 3 6.4188E-05 14810 20230619_1883_Aki_TMTPro18x_K_F4 109 98.387 163720 137160 154270 160130 159710 189760 185830 186790 215210 198000 200400 203550 209670 176550 189280 236470 225950 251630 151340 125760 157650 160260 166310 189550 186750 191290 216960 199700 206730 205550 212770 186220 195120 237350 216010 238740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136410000 25169 1009 23619 47279;47280 38086;38087 38086 2 9606 Homo sapiens -0.061471700762695036 SMVEQLDK Unmodified 948.45863 0.45863226 4645 Q9P287-2;B4E318;B4DUS0;Q9P287-4;Q9P287-3;Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes no 0 0 0 4 0 1 47.688 47.728 2 0.004343 12929 20230619_1883_Aki_TMTPro18x_K_F4 116.73 96.031 301480 239520 287860 282660 298990 359930 325280 298870 384710 402030 384690 388950 442770 359390 329230 452140 473350 423300 278610 219680 293730 282960 310720 356670 328260 312310 388800 400470 397130 394460 444690 376660 345390 450890 451160 402540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 216380000 25170 4645 23620 47281 38088;38089 38088 2 9606 Homo sapiens -0.017658714538015374 SMVNTKPEK Oxidation (M) 1048.5223 0.52229515 437 A0A024R7B7;Q16543;Q6FG59;K7EQA9 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 1 1 7.5 0.5 1 1 35.216 35.246 3 0.077892 7417 20230619_1887_Aki_TMTPro18x_K_F7 48.998 31.672 55081 26891 56392 68401 91223 107600 71325 95198 111600 69133 106300 136360 112740 104640 88439 65588 153870 161400 50814 24997 57781 66066 91597 105420 74343 97343 111040 73378 109750 134150 113830 106980 93827 71968 146650 152250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41820000 25171 437 23621 47282;47283 38090 38090 270 1 9606 Homo sapiens -2.511016714379366E-05 SMVQFIGR Unmodified 936.48512 0.48512178 3996 Q53G34;Q9Y6C9;E9PIE4 MTCH2 Mitochondrial carrier homolog 2 yes no 0 0 0 4.5 0.5 1 1 50.891 50.944 2 0.009481 14356 20230619_1883_Aki_TMTPro18x_K_F4 101.6 84.039 301310 242460 324770 347780 350810 396810 382800 367960 337450 273380 288680 322270 317690 225560 342230 340290 318750 378670 278760 222830 328530 343080 363000 396710 382720 375480 344290 282830 300180 321770 324180 242160 346290 342220 305620 359040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 246600000 25172 3996 23622 47284;47285 38091 38091 1 9606 Homo sapiens 0.014338622282025426 SMWTEHK Unmodified 917.40654 0.40653711 1683 A0A8Q3SIG7;A0A8V8TM87;A0A8V8TM61;F5H578;A0A7N4I394;O75400-2;O75400;O75400-3;Q05C41;H0YG38 PRPF40A Pre-mRNA-processing factor 40 homolog A yes no 0 0 0 7 0 1 40.294 40.36 3 0.0036656 9398 20230619_1887_Aki_TMTPro18x_K_F7 108.09 76.716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25173 1683 23623 47286 38092 38092 1 9606 Homo sapiens -0.05546990076891234 SMYEEEINETR Oxidation (M) 1415.5875 0.58747418 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98 LMNB1 Lamin-B1 yes no 0 1 0 1 0 2 40.868 40.868 2 7.119E-06 10271 20230619_1880_Aki_TMTPro18x_K_F1 148.91 136.12 303020 247770 247720 277810 303100 317120 235810 224100 263670 340540 389720 382130 365010 335370 306550 392900 400420 388960 279770 227110 257160 278570 308710 315740 242720 238600 272400 339160 392690 384490 370730 350380 318410 393450 382130 369520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 750250000 25174 3482 23624 47287;47288 38093;38094 38093 2134 2 9606 Homo sapiens -0.10369606072185888 SMYEEEINETR Unmodified 1399.5926 0.59255956 3482 P20700;E9PBF6;A0A0D9SFE5;Q6DC98 LMNB1 Lamin-B1 yes no 0 0 0 1 0 1 43.945 43.945 2 4.0817E-12 11820 20230619_1880_Aki_TMTPro18x_K_F1 208.6 170.04 417200 328140 339660 378690 321440 432800 291400 277520 342900 463460 480300 491320 574630 484870 420260 540480 660850 532070 385080 300910 351430 378880 335460 429930 297440 299390 352550 459320 490350 497240 576300 503320 443920 541460 629080 505930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 592640000 25175 3482 23624 47289 38095 38095 1 9606 Homo sapiens -0.0912530220955432 SNAAAYLQHLCYR Unmodified 1565.7409 0.74089555 1594 O60716;H0YC95;O60716-3;O60716-2;Q68DU0;C9JZR2;A0A669KB05;O60716-5;O60716-11;O60716-10;O60716-9;O60716-17;Q96FS1;O60716-21;O60716-19;O60716-13;O60716-18;O60716-6;O60716-8;O60716-4;O60716-7;A0A669KB62;O60716-20;O60716-22;O60716-23;O60716-16;O60716-24;O60716-12;O60716-15;O60716-14;Q7KZJ3;O60716-26;A0A024R4Z0;O60716-25;O60716-27;O60716-29;O60716-31;A0A024R4Y7;O60716-32;O60716-28;O60716-30;E9PKY0 CTNND1;DKFZp781O2021 Catenin delta-1 yes no 0 0 0 4 0 1 49.06 49.098 3 0.0011062 13555 20230619_1883_Aki_TMTPro18x_K_F4 92.65 78.971 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25176 1594 23625 47290 38096 38096 1 9606 Homo sapiens -0.01934526445188567 SNADYQYQLLR Unmodified 1369.6626 0.66262845 2341 Q96IQ6;B3KM57;Q9UIV1-2;Q9UIV1;H0YAV9;E5RGH2 CNOT7 CCR4-NOT transcription complex subunit 7 yes no 0 0 0 6.5 0.5 1 1 48.442 48.525 2 0.0049404 13273 20230619_1886_Aki_TMTPro18x_K_F6 100.79 78.744 90769 66991 81175 87829 91056 118600 101280 96923 118660 109590 118060 111020 121340 110020 108360 137310 124140 122560 83807 61526 83478 87355 94259 117030 102050 100840 119860 110180 121250 112690 123180 114920 111450 136640 118610 116570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98018000 25177 2341 23626 47291;47292 38097 38097 1 9606 Homo sapiens -0.007416357587771927 SNASLTNNQNLIQSLK Unmodified 1743.9115 0.91152593 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 3 0 1 55.936 55.977 3 2.5752E-19 16749 20230619_1882_Aki_TMTPro18x_K_F3 202.82 189.99 64951 55066 67562 77139 64770 76218 69860 69317 89829 80547 71661 84234 83012 64768 77300 91255 81457 87711 60092 50584 68433 76041 67695 76959 70764 71618 89676 80931 74966 84648 84066 68872 79014 91034 77940 83323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 241720000 25178 3440 23627 47293 38098 38098 1 9606 Homo sapiens 0.06932662687290758 SNDEEAFTFAR Unmodified 1285.5575 0.55749468 3548 P35520;P35520-2;B7Z2D6;B7Z6W5 CBS Cystathionine beta-synthase yes no 0 0 0 2.5 0.5 1 1 48.08 48.155 2 1.7342E-08 13549 20230619_1881_Aki_TMTPro18x_K_F2 187.33 177.53 120650 106610 123320 125000 96109 115000 107820 116080 127200 156650 166670 181080 176630 149360 170990 181730 189450 199680 111640 97733 124640 124630 102390 117080 108770 119620 130180 156810 169690 181600 179680 156840 175060 183070 181150 189430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 576240000 25179 3548 23628 47294;47295 38099 38099 1 9606 Homo sapiens -0.07386176955196788 SNDPQMVAENFVPPLLDAVLIDYQR Unmodified 2843.4164 0.4163801 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V488;B7ZB16;B4DR01;B3KWD0 XPO1 Exportin-1 yes no 0 0 0 6.5 0.5 1 1 67.983 68.015 3 1.4439E-13 21287 20230619_1887_Aki_TMTPro18x_K_F7 131.57 116.95 4757.5 2832.8 3310 2606.9 2508 3699.9 1656.9 3243 3582.7 4472.4 5808.6 7230.5 4857.2 3713.8 5202.3 5586.5 5725.3 7954.2 4373.9 2583.2 3401.8 2588.3 2660.1 3644.7 1688 3372.1 3595 4496.9 5820.4 7090.5 4932.2 4008.2 5315.5 5662 5474.4 7521.6 3 2 2 2 2 2 1 2 2 2 3 3 2 2 3 2 2 3 12586000 25180 3228 23629 47296;47297 38100;38101;38102;38103 38103 4 9606 Homo sapiens 0.06840856135613649 SNDPQMVAENFVPPLLDAVLIDYQR Oxidation (M) 2859.4113 0.41129472 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V488;B7ZB16;B4DR01;B3KWD0 XPO1 Exportin-1 yes no 0 1 0 7 0 1 67.461 67.483 3 8.2895E-09 21079 20230619_1887_Aki_TMTPro18x_K_F7 106.88 102.81 2543.3 2156 2215.6 2425.6 1766.3 1874.6 2172 1833.6 2080.2 1900.9 1918.8 2570.1 1956 1790.1 3129.2 3430.3 2084.5 3065.6 2349.7 1976.1 2272.1 2421 1880.7 1937.8 2164 1880.9 2117.7 1937.5 1985.4 2553.4 2051.2 1957 3106 3398.8 2011.4 2912 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10311000 25181 3228 23629 47298 38104 38104 1901 1 9606 Homo sapiens 0.05596552273027555 SNDPVAIAFADMLK Unmodified 1490.7439 0.74391524 2139 A8K9L8;Q9NZR1;Q4G0W6;G5EA42 TMOD2 Tropomodulin-2 yes no 0 0 0 8 0 1 64.907 64.927 3 3.146E-05 19933 20230619_1888_Aki_TMTPro18x_K_F8 107.98 79.679 25553 21334 24940 27922 17747 21377 22176 21757 23418 30134 32988 32856 33799 28589 34090 34267 35505 38364 23626 19584 25294 27568 19137 22121 22165 22444 24190 30074 33436 33088 34478 29939 34739 34572 33977 36385 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112450000 25182 2139 23630 47299 38105 38105 1 9606 Homo sapiens 0.018173038889699455 SNDPVATAFAEMLK Unmodified 1492.7232 0.7231798 4034 Q5HYL6;Q9NYL9;H0YKU1;H0YNJ8 DKFZp686E1899;TMOD3 Tropomodulin-3 yes no 0 0 0 6.5 0.5 1 1 64.338 64.376 3 1.0468E-06 19821 20230619_1887_Aki_TMTPro18x_K_F7 124.25 110.29 58765 42569 49978 53566 51089 70262 63589 58419 67161 69056 72201 75262 82375 69341 71318 80347 77298 88860 54232 39083 51563 53399 53440 69470 63490 60790 68436 69423 74309 75924 83218 72322 73098 81014 73980 84267 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114220000 25183 4034 23631 47300;47301 38106 38106 1 9606 Homo sapiens -0.003472864907280382 SNDPVAYALAEMLK Unmodified 1520.7545 0.75447993 3518 P28289;P28289-2 TMOD1 Tropomodulin-1 yes no 0 0 0 8 0 1 65.491 65.511 2 1.9436E-05 20143 20230619_1888_Aki_TMTPro18x_K_F8 140.08 123.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25184 3518 23632 47302 38107 38107 1 9606 Homo sapiens 0.014932865433820552 SNEDQSMGNWQIK Oxidation (M) 1551.6624 0.66237045 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;P02545-4;P02545-5;Q5TCI8;B4DFR3 LMNA Prelamin-A/C;Lamin-A/C yes no 0 1 0 4.2 0.748 1 2 2 46.297 46.36 2;3 3.3794E-08 12307 20230619_1883_Aki_TMTPro18x_K_F4 166.87 149.44 125950 106570 124450 136800 197350 208150 215260 208650 245460 192030 226800 221370 237560 190250 207090 194190 226770 248770 116470 97805 127780 136590 199620 205050 216780 212590 247400 195940 233990 222360 240590 197620 212130 198190 216930 235620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1188000000 25185 1428 23633 47303;47304;47305;47306;47307 38108;38109 38109 909 2 9606 Homo sapiens -0.09139423540932512 SNEDQSMGNWQIK Unmodified 1535.6675 0.66745583 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;P02545-4;P02545-5;Q5TCI8;B4DFR3 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 4.5 0.5 1 1 51.423 51.474 2 3.941499999999999E-21 14379 20230619_1885_Aki_TMTPro18x_K_F5 255.52 218.99 38741 33305 38749 42926 53760 69644 67244 61167 75386 64974 59006 63647 68114 49530 63806 53577 66940 64887 35834 30564 39651 42894 55091 68159 67204 63153 75677 65442 61752 64140 68973 51835 65069 54444 64003 61518 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92264000 25186 1428 23633 47308;47309 38110 38110 1 9606 Homo sapiens -0.07895119678300944 SNEEEETSDSSLEK Unmodified 1582.6482 0.64821976 1605 A0A6I8PIX7;O95425-2;O95425-4;O95425-3;O95425 SVIL Supervillin yes no 0 0 0 1 0 1 39.995 39.995 3 0.00026745 10110 20230619_1880_Aki_TMTPro18x_K_F1 93.424 80.657 11461 6823.5 10845 12423 14772 15356 16360 16243 16139 14702 24019 21322 23918 17205 15301 16167 20305 19211 10575 6299.1 11139 12115 15064 15317 16397 16491 16747 15140 24237 21218 23978 17842 15990 16435 19372 18218 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19343000 25187 1605 23634 47310 38111 38111 1 9606 Homo sapiens -0.11979842278901742 SNEILTAIIQGMR Unmodified 1444.7708 0.77079869 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9;J3QRG4 KPNB1 Importin subunit beta-1 yes no 0 0 0 3.5 0.5 2 2 64.404 64.424 2;3 1.2615E-15 20298 20230619_1882_Aki_TMTPro18x_K_F3 202.29 164.27 259200 211750 229690 232920 167000 234460 226890 229410 248130 276510 251720 264310 285760 254100 273900 291600 281700 286680 239440 194060 234910 233620 180520 236810 226080 235990 251920 276520 259730 268470 290080 264400 279250 292130 269480 272330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 454240000 25188 3904 23635 47311;47312;47313;47314 38112;38113 38112 2 9606 Homo sapiens 0.0662041250011498 SNELGDVGVHCVLQGLQTPSCK Unmodified 2397.1417 0.14167857 1206 A0A140VJT8;P13489;A0A024RC87;E9PIM9;E9PMJ3;E9PLZ3;E9PIK5 RNH1 Ribonuclease inhibitor yes no 0 0 0 8 0 1 57.017 57.069 4 1.728E-12 16616 20230619_1888_Aki_TMTPro18x_K_F8 140.17 123.94 160200 134590 168000 173030 147850 185410 206790 191350 184780 223160 205600 211180 246430 204030 207580 267680 229070 251730 148210 123520 169800 171760 156780 186620 204410 195950 190540 223380 211820 214750 248330 214090 213290 266890 219120 239180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 695520000 25189 1206 23636 47315 38114 38114 1 9606 Homo sapiens -0.0010065982442029053 SNEYQLIDCAQYFLDK Unmodified 2005.9091 0.90914267 1073 A0A0S2Z3H8;A0A7I2V5R6;Q5JWF2;Q5JWF2-2;P63092-4;P63092-3;P63092;P63092-2;Q5JWE9;A0A0S2Z3S5;Q14455;A0A590UJQ9;A0A590UK28;Q5FWY2;A0A804HIH4;B0AZR9;A0A0A0MR13;A0A590UJF0;A0A590UJS2 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short yes no 0 0 0 7.5 0.5 1 1 63.966 63.992 3 6.4715E-15 19644 20230619_1887_Aki_TMTPro18x_K_F7 187.56 166.9 414030 286560 365990 409060 288270 349540 350600 377310 392630 516300 453200 472510 620420 478390 330890 644950 537100 578000 382110 263500 374860 402170 307660 358480 351500 387260 400830 512800 469200 482010 613950 502280 354690 640700 512190 549540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232620000 25190 1073 23637 47316;47317 38115 38115 1 9606 Homo sapiens -0.0535755383268679 SNFAEALAAHK Unmodified 1157.5829 0.58292157 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;A0A7P0Z4J0;B4DJS0;A0A7P0Z4S2;A0A7P0TAX9;A0A7P0Z476;I3NI03;A0A7P0TBP8;A0A7P0T9S9;B4DNP9;I3L3U6;I3L1Y5;A0A7P0T9E3;A0A7P0T940;A0A7P0Z4B2;A0A7P0TBA3;A0A7P0Z4F8 P4HB Protein disulfide-isomerase yes no 0 0 0 8 0 1 48.268 48.334 3 4.1424E-05 12770 20230619_1888_Aki_TMTPro18x_K_F8 133.88 107.36 351680 272840 288290 336190 328600 412380 409460 365790 428740 361280 338340 303170 348060 288130 337850 386140 354650 323500 324600 250370 299160 335230 340790 409990 408490 376850 431940 363790 351650 310140 354450 302890 344920 382840 338940 308040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1425500000 25191 537 23638 47318 38116 38116 1 9606 Homo sapiens 0.010433423578888323 SNFGYNIPLK Unmodified 1151.5975 0.597509 1225 Q6IB71;A0A140VK43;P25788-2;P25788;G3V4X5 PSMA3 Proteasome subunit alpha type;Proteasome subunit alpha type-3 yes no 0 0 0 3 0 1 56.45 56.487 3 0.003427 16955 20230619_1882_Aki_TMTPro18x_K_F3 73.781 57.149 87617 65487 70163 76312 76478 93782 82971 82389 274630 62037 52685 50711 69209 58318 63891 83429 64920 64347 80839 60070 72869 76409 79658 93223 88937 84406 259350 63992 65123 52341 69980 61219 65228 82308 62101 61322 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73522000 25192 1225 23639 47319 38117 38117 1 9606 Homo sapiens 0.027774145060448063 SNFKPSLLAQK Unmodified 1231.6925 0.69247202 853 Q96CW1;Q96CW1-2;A0A087WY71;B4E304;E9PFW3;B4DNB9;C9JPV8;C9JGT8;B4DJB1;C9JJD3;H7C4C3;B4DFM1;C9JTK4;A0A8I5KWD3;B4DTI4;B7Z4N2 AP2M1 AP-2 complex subunit mu yes no 0 0 1 5 0 1 49.856 49.932 3 6.7449E-05 13707 20230619_1885_Aki_TMTPro18x_K_F5 131.32 98.093 329900 329550 321880 333030 353560 465580 375180 383050 450860 55709 54843 41355 38212 31200 137670 49889 42258 37066 305410 301600 328300 337900 366030 458690 379120 388260 437910 74177 74323 42639 44368 33506 132490 49399 41319 35361 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65342000 25193 853 23640 47320 38118 38118 1 9606 Homo sapiens 0.0858934797722668 SNFLVLCYLHDVK Unmodified 1606.8177 0.81774888 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 3 0 1 62.002 62.031 3 9.1361E-05 19253 20230619_1882_Aki_TMTPro18x_K_F3 103.21 83.107 70459 57585 78203 79203 55075 70982 108430 42874 79460 93071 80538 62032 111490 96388 89462 103970 85427 101940 65210 52893 78507 78065 60416 71746 105180 47311 82706 90520 83838 65615 111750 98731 91221 104200 81889 96783 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 354300000 25194 3598 23641 47321 38119 38119 1 9606 Homo sapiens 0.03861272051267406 SNFSNSADDIK Unmodified 1196.5309 0.53094558 3587 V9HWG0;P45973;Q6I9T7 HEL25;CBX5 Chromobox protein homolog 5 yes no 0 0 0 3.5 0.5 1 1 44.147 44.204 2 1.5361E-17 11474 20230619_1882_Aki_TMTPro18x_K_F3 240.85 177.43 268780 211010 220580 243820 242550 277190 241170 226880 308490 310120 353980 317690 331920 276180 283800 364010 364750 331940 248100 193510 228540 243970 250480 276660 245360 237540 312250 309270 359740 320970 337190 290880 294340 362360 347980 315740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 222870000 25195 3587 23642 47322;47323 38120;38121;38122 38121 3 9606 Homo sapiens -0.05945865846547349 SNHPEDLQAANR Unmodified 1350.6276 0.62763993 4672 Q9UJY4 GGA2 ADP-ribosylation factor-binding protein GGA2 yes yes 0 0 0 3.5 1.5 1 1 28.354 28.428 3 2.8548E-06 5171 20230619_1885_Aki_TMTPro18x_K_F5 145.23 133.27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25196 4672 23643 47324;47325 38123;38124 38124 2 9606 Homo sapiens -0.03364878566731022 SNIDALLSR Unmodified 987.53491 0.53490874 2053 Q5QPL9;A8K4T9;Q53GL6;Q9UKM9-2;Q9UKM9;Q5QPM0 RALY RNA-binding protein Raly yes no 0 0 0 6.5 0.5 1 1 50.998 51.075 2 0.00043865 14157 20230619_1887_Aki_TMTPro18x_K_F7 145.25 67.516 506550 416730 405160 465600 448370 531730 524740 524610 564040 540140 535560 507100 564600 481390 506850 582090 554240 548900 467630 381970 421110 467150 464870 532510 525810 536780 571300 544090 551920 515640 572610 502740 519440 581290 529800 521720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 344170000 25197 2053 23644 47326;47327 38125 38125 1 9606 Homo sapiens 0.040642684378553895 SNIGTVYER Unmodified 1037.5142 0.5141733 932 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;A0A0U1RR25;F8W8U2 MADD MAP kinase-activating death domain protein yes no 0 0 0 5 0 1 38.802 38.894 2 0.053899 9081 20230619_1885_Aki_TMTPro18x_K_F5 66.603 50.309 28824 23324 30498 30793 29975 31863 29837 31233 35170 32432 42803 48238 46304 39803 39116 41910 54224 47019 26663 21415 30831 30499 31165 32126 30280 31993 35815 33195 43740 47959 46820 41439 40745 42365 51685 44631 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36562000 25198 932 23645 47328 38126 38126 1 9606 Homo sapiens -0.0030832194181584782 SNIHCNTIAPNAGSR Unmodified 1610.7583 0.75833653 1097 P51659;A0A0S2Z4J1;B2R659;E7EPL9;A0A804HK65;A0A2R8YD50;P51659-2;P51659-3;B4DSD0;B4DDM5;A0A804HKU2;A0A2R8Y7L2;B4DI68;E7ET17;B3KSP2;E7ER27;A0A804HIG8;A0A2R8Y7W2 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 0 0 0 5.33 3.09 1 1 1 31.846 31.879 3 9.759399999999999E-19 6273 20230619_1888_Aki_TMTPro18x_K_F8 199.33 170.6 24876 21890 23017 22587 25128 30832 23070 22238 29701 24349 33953 34622 30854 27463 22102 39147 45122 37414 22999 20046 23565 22867 25921 30358 23594 23375 30020 24825 34486 34468 31208 29164 23991 38999 42897 35582 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 105320000 25199 1097 23646 47329;47330;47331 38127;38128;38129;38130 38130 4 9606 Homo sapiens -0.022612309101987194 SNILLLGPTGSGK Unmodified 1255.7136 0.71360139 364 Q9H072;A0A024R5X7;O76031 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes no 0 0 0 3.5 0.5 1 1 56.798 56.819 3 0.019681 17008 20230619_1883_Aki_TMTPro18x_K_F4 58.885 34.899 61057 54295 68419 67323 65041 77625 77051 78946 81694 81528 75264 72510 87273 72034 69028 88596 79135 75992 56545 49802 68847 67071 68164 77725 77153 80604 82745 81982 78020 74033 87817 75198 71178 88009 75596 72322 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153940000 25200 364 23647 47332;47333 38131 38131 1 9606 Homo sapiens 0.09597313286076314 SNILTLMYQCMQDK Unmodified 1743.7994 0.79939798 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;Q92973-3;A0A7P0T944;A0A7P0T9C0 TNPO1 Transportin-1 yes no 0 0 0 3.5 0.5 1 1 64.562 64.582 3 9.5613E-12 20241 20230619_1883_Aki_TMTPro18x_K_F4 151.9 141.05 42640 39940 44714 38393 35649 39783 34323 37964 43851 49319 43783 40950 53340 40710 39962 54468 55665 57781 39480 36545 45063 38965 37728 40114 35025 39200 44188 48978 45308 41961 53486 42771 41818 54648 53123 54838 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 156800000 25201 629 23648 47334;47335 38132;38133 38133 2 9606 Homo sapiens -0.04274973977226182 SNINGPGTPRPLNRPK Unmodified 1716.9383 0.9383498 4626 Q9NY27-2;Q9NY27-3;Q9NY27 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes no 0 0 2 7 0 1 35.365 35.436 4 0.014328 7501 20230619_1887_Aki_TMTPro18x_K_F7 65.472 41.281 11847 10598 12743 14362 16199 15039 14935 13319 17433 13495 15185 13486 12681 11077 16824 17821 15299 11522 10968 9730.3 12929 14198 16496 15122 15204 13739 17516 13638 15573 13628 13222 11849 16956 17446 14626 11024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19859000 25202 4626 23649 47336 38134 38134 1 9606 Homo sapiens 0.10855816089133441 SNITSLG Unmodified 690.35482 0.35481911 3880;2441 B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 no no 0 0 0 5 0 1 46.323 46.4 2 0.048639 12209 20230619_1885_Aki_TMTPro18x_K_F5 86.838 75.965 59658 39749 55223 57040 50853 50872 46934 43255 54071 63760 83418 79377 69684 59074 62754 56732 88100 73826 55066 36560 56389 56085 53044 51748 47822 45313 55853 63794 83559 79153 71232 61498 65290 58033 83950 69992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180060000 25203 2441;3880 23650 47337 38135 38135 1 9606 Homo sapiens -0.002744104991279528 SNITSLS Unmodified 720.36538 0.3653838 1217;2811 Q6DEN2;A0A140VK07;Q14195-2;Q8IXW6;Q14195;B4DLZ4;H0YBT4;O14531;D3DRG7;Q5T0Q6 DPYSL3;DPYSL4 Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 4 no no 0 0 0 4.5 0.5 1 1 45.479 45.54 2 0.050303 11959 20230619_1883_Aki_TMTPro18x_K_F4 86.086 81.232 114260 96968 127790 140660 155590 159950 141760 139150 183290 154700 156250 147390 170100 133070 129080 134530 190550 146580 105780 89111 129170 138640 158980 159790 145000 144020 183280 155380 162070 149430 171210 137900 135370 135850 181420 139250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181720000 25204 1217;2811 23651 47338;47339 38136;38137 38136 2 9606 Homo sapiens -0.005984278447044744 SNLENIDFK Unmodified 1078.5295 0.52948901 914 P30566;A0A7P0T9A7;A0A7P0Z472;A0A096LNY6;X5D8S6;A0A1B0GTJ7;A0A1B0GWJ0;B4DP46;A0A0A6YY92;Q71UA4;A0A7P0T8E4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;X5D2Z4;X5DP48;P30566-2;A8K4X6;A0A096LP92;A0A096LNY4;A0A096LP72;B4DEP1 ADSL Adenylosuccinate lyase yes no 0 0 0 5 0 1 52.604 52.677 3 0.003846 14890 20230619_1885_Aki_TMTPro18x_K_F5 78.61 43.342 67091 56386 61411 67016 62337 80596 75831 72478 87585 86558 76715 73713 101550 66628 74718 98459 93150 87916 62004 51708 62926 66983 65155 80258 76021 74972 88181 86347 80266 75212 101470 70739 77594 97762 88910 83634 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187850000 25205 914 23652 47340 38138 38138 1 9606 Homo sapiens -0.0066345514460408594 SNLMDAISFVLGEK Unmodified 1522.7701 0.77012999 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709;Q68EN4;Q5H934;Q7Z4C6 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 2.5 0.5 1 1 66.874 66.914 3 0.0093601 21318 20230619_1882_Aki_TMTPro18x_K_F3 66.246 51.56 4815.3 5612.4 4952.6 4619.2 4205.8 5825.6 4540 6574.4 6054.2 4314.3 7235.9 5488.9 6227.2 5955.9 5636.3 5327.7 6043.2 7911.6 4465.4 5126.2 5007.1 4770.4 4448.4 5817.4 4613.4 6597 6116.4 4519.3 7310.7 5545.7 6362.7 6096 5763.2 5509.4 5791.1 7480.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3900400 25206 1432 23653 47341;47342 38139;38140 38140 2 9606 Homo sapiens 0.02965573060441784 SNLNPNAK Unmodified 856.44028 0.44028008 2841 D6R9Y1;Q6FID7;Q49AE6;Q9BPZ3 PAIP2 Polyadenylate-binding protein-interacting protein 2 yes no 0 0 0 8 0 1 36.779 36.765 2 0.016807 8190 20230619_1888_Aki_TMTPro18x_K_F8 99.442 55.634 10702 6793.4 21699 15456 24592 29667 21538 24894 22858 13878 19363 19700 19832 16742 16953 7642.4 23087 17277 9965.7 6292.3 21138 15076 25222 28780 21950 25444 23042 14808 20053 19622 20093 16898 17571 8400.8 21990 16329 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6324400 25207 2841 23654 47343 38141 38141 1 9606 Homo sapiens 0.006317546865034274 SNLQVSNEPGNR Unmodified 1313.6324 0.63239096 1957 A5YKK6;A5YKK6-2;B4DYL7;B3KPW6;B7Z6X2;B3KS60 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 4 0 1 34.782 34.832 2 0.00032712 7482 20230619_1883_Aki_TMTPro18x_K_F4 112.13 76.182 6085.1 2525.8 4949.6 7127.2 7065.4 8286.2 7255.5 7121.3 7926.2 7177.6 9045.3 10519 9268.5 7994.2 8719.8 4967.2 9871.7 10350 5600.7 2355.7 5168.9 6820.6 7183.2 8253.2 7323.4 7360.2 8077.7 7353.2 9248.2 10427 9426.3 8175.3 8918.4 5354.7 9437.4 9772 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4671900 25208 1957 23655 47344 38142 38142 1 9606 Homo sapiens -0.011879944239581164 SNLVDNTNQVEVLQR Unmodified 1727.8802 0.8802258 3102 Q9NUU7;I3L0H8;Q9UMR2;Q9UMR2-4;Q9UMR2-2;A0A0U4B4U6;F6QDS0;H3BQK0;Q53G16;Q7Z4W5;Q9HBZ9;Q2NL95;B4DS24;H3BTB3;H3BN59;H3BMQ5 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B yes no 0 0 0 4.5 0.5 1 1 48.884 48.942 3 1.2061E-18 13274 20230619_1885_Aki_TMTPro18x_K_F5 194.77 162.17 107530 100550 106620 118100 97682 119920 112500 105500 153580 133870 140460 150800 157220 145150 121930 150550 145620 160840 99511 92160 108330 117850 102740 120790 113840 109590 153560 134380 145480 152090 158350 150150 126080 151710 139200 152600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 774460000 25209 3102 23656 47345;47346 38143;38144 38144 2 9606 Homo sapiens 0.045400896531873514 SNLYIAESTSGR Unmodified 1296.631 0.63099397 2899 E7ESL0;J3KQY1;Q9NWU5;Q9NWU5-2;Q9NWU5-3 MRPL22 39S ribosomal protein L22, mitochondrial yes no 0 0 0 5.67 0.471 1 2 43.34 43.428 2 1.3365E-06 10981 20230619_1885_Aki_TMTPro18x_K_F5 155.99 124.62 31762 27865 28156 37083 34244 41229 42659 36691 42493 41265 43952 44693 44399 36718 37913 44188 48529 44818 29355 25579 29061 36723 35336 41257 42492 37942 43352 41566 45049 44942 44994 38537 39285 44304 46304 42575 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186440000 25210 2899 23657 47347;47348;47349 38145;38146 38145 2 9606 Homo sapiens -0.005456285127365845 SNMEFEER Unmodified 1040.4233 0.42330938 2543 B4DMG1;Q9NP66;H0YKL0 HMG20A High mobility group protein 20A yes no 0 0 0 1 0 1 38.883 38.883 2 0.056612 9587 20230619_1880_Aki_TMTPro18x_K_F1 70.1 57.047 30994 21015 26191 27808 29153 34312 32403 33680 34780 35881 37497 40598 39198 35592 34943 40326 50767 44002 28592 19310 27064 27608 30162 34176 32562 34500 35416 36283 38440 40824 39783 37123 36505 40640 48374 41779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18274000 25211 2543 23658 47350 38147 38147 1 9606 Homo sapiens -0.0952853398159732 SNMGHPEPASGLAALAK Oxidation (M) 1665.8145 0.81445442 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 1 0 8 0 1 45.27 45.298 3 0.013833 11636 20230619_1888_Aki_TMTPro18x_K_F8 53.773 41.628 40518 34803 37306 42679 34109 39509 40143 36771 30245 40047 43759 48339 39405 29954 39798 47498 44318 54856 37453 31923 38149 42408 35835 40131 39841 37875 31943 40508 44114 48068 40348 32454 40760 47827 42433 51986 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66900000 25212 3606 23659 47351 38148 38148 2285 1 9606 Homo sapiens 0.008179772066569058 SNMGHPEPASGLAALAK Unmodified 1649.8195 0.8195398 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 8 0 1 47.808 47.866 3 1.3064E-13 12600 20230619_1888_Aki_TMTPro18x_K_F8 157.98 137.4 72749 90201 83953 77688 50141 72590 71811 78482 53640 86886 85661 94502 87113 65808 86313 87884 92654 114880 67571 82400 83819 79537 55388 73968 70708 79994 57075 87470 86533 94571 88755 70081 88149 89450 88744 108750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71792000 25213 3606 23659 47352 38149 38149 1 9606 Homo sapiens 0.020622810692657367 SNNIINETTTR Unmodified 1261.6262 0.62624295 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;B3KVJ5;Q6NSG3;Q58F29 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 4.5 0.5 1 1 38.892 38.959 2 5.467E-06 9135 20230619_1883_Aki_TMTPro18x_K_F4 157.68 133.46 182960 125880 173970 171630 198240 215220 199140 192890 227780 239020 249210 227180 263730 223650 206450 253310 263870 232610 168940 115690 177820 170120 204030 213790 201640 199790 231390 238770 255090 231120 266010 232380 214350 252820 251700 221270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 250530000 25214 4593 23660 47353;47354 38150;38151 38150 2 9606 Homo sapiens 0.005894873444958648 SNNVEMDWVLK Oxidation (M) 1349.6286 0.62855113 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;D6RBM0;D6RIU0;D6RIT2;D6R9T0;D6RIH9;D6RFM3;E5RGV0;D6RJ04;D6RAM1;D6RDU3;E7EQJ0;E5RGH4;H0YAQ2 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 1 0 4.5 0.5 2 2 54.908 54.947 2;3 0.00089334 15792 20230619_1885_Aki_TMTPro18x_K_F5 99.973 69.719 333540 309100 327400 358100 409710 362170 400650 386300 383600 363310 373300 312960 347250 288410 416700 366620 297830 313390 308620 283290 334420 357770 417960 366790 403960 392400 391400 366840 382180 319460 358330 302450 415690 364390 286210 298160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 606670000 25215 1427 23661 47355;47356;47357;47358 38152;38153 38153 902 2 9606 Homo sapiens -0.03227800242052581 SNNVEMDWVLK Unmodified 1333.6336 0.63363651 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;D6RBM0;D6RIU0;D6RIT2;D6R9T0;D6RIH9;D6RFM3;E5RGV0;D6RJ04;D6RAM1;D6RDU3;E7EQJ0;E5RGH4;H0YAQ2 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 0 0 5.71 1.03 1 2 2 2 60.46 60.504 2;3 4.6184E-09 18315 20230619_1886_Aki_TMTPro18x_K_F6 176.62 144.12 469390 383620 467750 480720 351520 469990 467880 431140 494880 604790 543180 532370 639730 522590 530690 646170 593930 628340 434020 352020 473710 477380 378050 475030 466020 447950 505200 599620 559150 543420 644530 546120 545690 646020 567890 596870 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2110599999.9999998 25216 1427 23661 47359;47360;47361;47362;47363;47364;47365 38154;38155;38156;38157 38155 4 9606 Homo sapiens -0.019834963794210125 SNNYVQEPECR Unmodified 1394.5885 0.58847723 2511 C9JX74;B5MBW3;E7EW93;B4DKD5;H7C316;Q7Z6M4 MTERF4 Transcription termination factor 4, mitochondrial;mTERF domain-containing protein 2 processed yes no 0 0 0 2 0 1 35.681 35.737 2 2.6393E-11 7967 20230619_1881_Aki_TMTPro18x_K_F2 170.89 140.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25217 2511 23662 47366 38158 38158 1 9606 Homo sapiens -0.09303346912611232 SNPEDQILYQTER Unmodified 1591.7478 0.74781464 2970 F5H1S8;Q14165;F5GX14 MLEC Malectin yes no 0 0 0 3 0 1 48.102 48.181 2 1.162E-07 13318 20230619_1882_Aki_TMTPro18x_K_F3 138.45 123.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25218 2970 23663 47367 38159 38159 1 9606 Homo sapiens -0.02438935083614524 SNPGGFGIAPHCLDEGTVR Unmodified 1982.9269 0.92685842 4179 Q7Z7K6;Q7Z7K6-3;Q7Z7K6-2 CENPV Centromere protein V yes no 0 0 0 5.5 0.5 1 1 46.827 46.907 3 2.7494E-10 12552 20230619_1886_Aki_TMTPro18x_K_F6 128.92 115.46 154190 144270 153990 170600 169390 175430 159070 187810 200490 175430 143680 158750 198920 151470 142630 197040 202220 200380 142700 132250 156750 170220 174430 177370 162340 190590 199750 177470 152560 161680 198560 159020 149600 197290 192890 190290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 251570000 25219 4179 23664 47368;47369 38160;38161 38161 2 9606 Homo sapiens -0.025287937872008115 SNPQVYMDIK Unmodified 1193.5751 0.575059 2159 E9PEQ6;A8KAM9;Q9UNP9-2;Q9UNP9;Q9UNP9-3;E9PKY5;B3KSZ1 PPIE Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase E yes no 0 0 0 7 0 1 51.696 51.77 3 0.00014151 14370 20230619_1887_Aki_TMTPro18x_K_F7 102.4 77.015 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25220 2159 23665 47370 38162 38162 1 9606 Homo sapiens -0.013985529539013442 SNPSAVAGNETPGASTK Unmodified 1586.7536 0.7536283 184 Q9UDY2-7;Q9UDY2;A0A1B0GTW1;Q9UDY2-3;A0A3B3ITE1;A0A024R233;A0A2R8YDH4;A0A3B3IRI3;B7Z954;Q9UDY2-6;A0A3B3ISZ5;A0A3B3IS03 TJP2 Tight junction protein ZO-2 yes no 0 0 0 5 0 1 39.071 39.162 3 8.5579E-07 9190 20230619_1885_Aki_TMTPro18x_K_F5 116.51 103.89 17372 10722 19123 19168 26924 30630 22307 25246 30666 31776 34755 30274 33041 31357 27896 28009 40690 36205 16053 9893.3 19399 18796 27243 29961 23026 26313 30941 31729 35350 30839 33564 32137 29160 28662 38777 34317 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37828000 25221 184 23666 47371 38163 38163 1 9606 Homo sapiens -0.01627836571969965 SNPSVFVIFQK Unmodified 1264.6816 0.68157298 2740 C9J6P4;Q7Z2W4;A8K9U6;A0A7P0T8C6;Q7Z2W4-4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 0 4.5 0.5 1 1 62.202 62.228 3 0.00027512 19283 20230619_1883_Aki_TMTPro18x_K_F4 104.79 85.182 20807 25840 24945 28256 23740 24026 27548 24071 33211 28332 25106 27388 24528 19184 33799 32080 28552 36251 19334 23650 24997 28289 24832 24638 27720 24724 33184 28382 26153 27566 25483 20760 33911 32261 27423 34359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117400000 25222 2740 23667 47372;47373 38164 38164 1 9606 Homo sapiens 0.05981945602934502 SNPYYIVK Unmodified 982.51238 0.51238239 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 1.5 0.5 1 1 49.813 49.843 3 0.0096963 14385 20230619_1881_Aki_TMTPro18x_K_F2 76.221 46.748 99041 80907 96802 94699 98093 128770 114770 95422 131920 47378 47148 44617 41115 36474 76390 45419 48913 50236 91562 74193 98565 94945 102410 126800 115170 98568 129750 50570 52168 45193 43861 38372 75371 45865 47074 47658 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66155000 25223 4191 23668 47374;47375 38165 38165 1 9606 Homo sapiens 0.02042669040235978 SNQIPTEVR Unmodified 1042.5407 0.5407224 4456 Q9BWH2 FUNDC2 FUN14 domain-containing protein 2 yes yes 0 0 0 4.5 0.5 1 1 37.469 37.538 2 0.00054157 8496 20230619_1885_Aki_TMTPro18x_K_F5 132.13 93.842 44044 30107 38667 49947 53176 54015 55004 53702 70913 53127 59950 67500 60064 51767 58838 61709 66746 63387 40643 27738 40014 48820 54133 54286 55813 54882 70845 54188 62084 67322 61259 54429 60302 61944 63762 60200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216480000 25224 4456 23669 47376;47377 38166 38166 1 9606 Homo sapiens 0.021153669495106442 SNQQLENDLNLMDIK Unmodified 1773.8567 0.85671317 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;A0A0J9YXZ5;Q6P1N4;Q96PA3 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 4 0 1 61.918 61.922 3 0.017676 19144 20230619_1883_Aki_TMTPro18x_K_F4 57.973 49.563 177100 169790 172510 174730 179400 179700 213160 203980 222300 178950 132140 109670 147010 127480 183420 155890 148650 148550 163900 155430 175750 176260 186520 182020 213160 206020 222350 180160 140450 115160 151330 132480 183800 155880 142560 141170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233420000 25225 707 23670 47378 38167 38167 1 9606 Homo sapiens 0.0007390782436687005 SNQQLVDIIEK Unmodified 1285.6878 0.68778057 180 V9HWJ8;A0A024R203;P61289;P61289-3;P61289-2;K9J957;Q6FHK7;B3KQ25;K7ESG5;K7ENH2;K7EMD0;K7EPX6;K7EKR3 HEL-S-283;PSME3 Proteasome activator complex subunit 3 yes no 0 0 0 5 0.816 1 1 1 56.647 56.713 2;3 6.3343E-09 16561 20230619_1885_Aki_TMTPro18x_K_F5 170.04 127.7 197490 144980 170200 189210 196770 195480 202220 205320 239150 238180 175980 180370 226560 172100 164570 254200 189670 201760 182280 133150 175650 187520 202370 197470 204680 209910 239280 237200 185720 185470 226590 182220 170330 250920 181320 192140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2489600000 25226 180 23671 47379;47380;47381 38168;38169;38170 38169 3 9606 Homo sapiens 0.05636419043821661 SNQQNLGTIK Unmodified 1101.5778 0.57783619 2555 B4DNN4;Q53GZ5;P23921;B4E0I8;E9PL69;B4DXB0;B4DS95;B4DXD1 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 0 0 0 8 0 1 41.002 40.994 3 1.4577E-07 9887 20230619_1888_Aki_TMTPro18x_K_F8 164.65 130.12 71321 37410 80720 80538 130730 174470 98557 103300 133660 40200 48103 47454 45598 35306 60795 25827 51623 40580 65873 34651 82005 78863 131260 167460 102250 108690 130500 44471 53299 47449 47348 36354 60843 27052 49404 38427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85544000 25227 2555 23672 47382 38171 38171 1 9606 Homo sapiens 0.031110384952853565 SNQTAYVPAPLRK Unmodified 1443.7834 0.78341229 2848 Q9UPQ0-10;Q9UPQ0;D6RD46;Q9UPQ0-2;Q9UPQ0-4;G5EA03;E9PDJ9;B7Z2J4;E7EPK0;Q9UPQ0-3;Q9UPQ0-8;Q9UPQ0-5;Q9UPQ0-6;H0Y8P3;Q9UPQ0-9;B7Z5Q8;B7Z3F1;B7Z3G0;B7Z5G6;Q6N054;Q6NVB9;D6RJ93;Q9UPQ0-7 LIMCH1;DKFZp686G03277 LIM and calponin homology domains-containing protein 1 yes no 0 0 1 4 0 1 44.328 44.372 3 0.049174 11472 20230619_1883_Aki_TMTPro18x_K_F4 46.41 27.335 120810 103610 112970 105940 116730 156300 138770 125270 177110 95389 127070 130660 118420 115510 146840 116580 135680 136860 111680 94876 115470 107510 121840 153470 139740 129350 175910 99283 132440 130580 122610 119650 148030 118380 129940 129780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25483000 25228 2848 23673 47383 38172 38172 1 9606 Homo sapiens 0.07927191954695445 SNQTTTDNLR Unmodified 1148.5422 0.54217896 4536 Q9H9A5-4;Q9H9A5-3;Q9H9A5-2;Q9H9A5;Q9H9A5-6;H7C1X9 CNOT10 CCR4-NOT transcription complex subunit 10 yes no 0 0 0 3 0 1 29.733 29.827 2 0.0060302 5548 20230619_1882_Aki_TMTPro18x_K_F3 87.913 54.793 4410.1 1680.4 4389.3 5727.8 6690.3 8332.1 6014.6 6411.5 4697.4 3766 6224.1 7786.5 6210.4 4984.1 7677.1 2886.6 6869.3 6960.2 4064.1 1575.7 4505 5473 6752.4 8170.9 6064.7 6612.6 4916 4069.1 6329.4 7618.4 6403.9 5127.2 7708.8 3178.5 6580.9 6567.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3820300 25229 4536 23674 47384 38173 38173 1 9606 Homo sapiens -0.026150437523938308 SNSEVEDVGPTSHNR Unmodified 1626.7234 0.72339081 1766 B4DKX3;A0A8I5KSH6;Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 yes no 0 0 0 1.5 0.5 1 1 31.148 31.181 3 9.759399999999999E-19 6156 20230619_1881_Aki_TMTPro18x_K_F2 199.33 175.49 6506.6 3687.8 4140.8 6048.3 5960.3 6454.6 6849.4 5753.7 8388.9 5782.2 6174.6 6075.7 5326 6106.1 5764.2 6545.9 8128.4 8118.1 5986.8 3400.3 4443 5912.5 6077.9 6476.9 6893.8 5931.8 8360.9 5858.9 6402.7 6157.5 5498.9 6316.6 5988.4 6656.3 7754.3 7693.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34491000 25230 1766 23675 47385;47386 38174 38174 1 9606 Homo sapiens -0.0649019523714287 SNSEVEDVGPTSHNRK Unmodified 1754.8184 0.81835383 1766 B4DKX3;A0A8I5KSH6;Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 yes no 0 0 1 3 0 1 31.853 31.931 4 1.6161E-05 6368 20230619_1882_Aki_TMTPro18x_K_F3 82.663 75.935 10893 10148 10880 13101 13440 14324 9840.5 11368 15437 13045 17099 14971 14231 11973 16494 12164 14284 13788 10081 9310.7 11101 12997 13669 14326 10312 11863 15464 13160 17327 15012 14717 12461 16586 12328 13685 13080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12887000 25231 1766 23676 47387 38175 38175 1 9606 Homo sapiens -0.02886261765979725 SNSNIHPIFSWCGSTDSK Unmodified 2035.9058 0.90578862 4134 Q6UW63 KDELC1 KDEL motif-containing protein 1 yes yes 0 0 0 2 0 1 52.031 52.069 3 0.076148 15387 20230619_1881_Aki_TMTPro18x_K_F2 37.4 20.715 21567 17139 17360 21545 24302 24196 21289 23565 23583 23679 26822 24008 21826 22205 21904 24840 26302 29829 19907 15729 18110 21425 24604 24258 21718 24114 24026 23933 27129 24310 22465 23097 22533 25189 25148 28266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16883000 25232 4134 23677 47388 38176 38176 1 9606 Homo sapiens -0.07072803886717338 SNSVEMDWVLK Oxidation (M) 1322.6177 0.61765209 1404 A0A384MDT2;P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 yes no 0 1 0 5 0 1 55.337 55.402 2 0.0033483 15999 20230619_1885_Aki_TMTPro18x_K_F5 88.496 59.409 16076 13777 11999 15963 18505 18392 21569 24514 20245 18462 23251 18333 22702 17559 20749 21606 18640 24593 14838 12630 12653 15978 18773 18557 21527 24441 20806 18970 23659 18625 23074 18368 21024 21810 17896 23305 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14027000 25233 1404 23678 47389 38177 38177 876 1 9606 Homo sapiens -0.0307520261630998 SNTAGSQSQVETEA Unmodified 1407.6114 0.61138074 3789 Q02790;B2R9U2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 1 0 1 35.479 35.479 3 2.8642E-05 8159 20230619_1880_Aki_TMTPro18x_K_F1 109.22 100.26 16865 9586.3 21261 20103 21745 24357 15369 20790 25786 19759 23564 31060 23845 18316 27884 18569 29194 29431 15599 8871.6 21225 19476 22392 24204 16215 21450 25577 20371 24351 30546 24509 19343 28302 19293 27922 27838 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26091000 25234 3789 23679 47390 38178 38178 1 9606 Homo sapiens -0.0761204931411612 SNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETR Unmodified 4243.977 0.97700309 3447 P13639;Q8TA90;B4DPU3 EEF2 Elongation factor 2 yes no 0 0 1 8 0 1 62.358 62.383 4 0.0059654 18783 20230619_1888_Aki_TMTPro18x_K_F8 49.366 44.195 29298 26545 34647 30479 22294 29209 27538 27314 29316 39342 36257 38807 43422 35587 26961 50348 40274 42006 27150 24329 34540 30460 24296 29590 27553 28364 30096 39084 37183 39318 43307 37589 28572 49819 38417 39980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 842400000 25235 3447 23680 47391 38179 38179 1 9606 Homo sapiens -0.01522632922296907 SNTLPISLQSIR Unmodified 1327.746 0.74596415 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 3.5 0.5 1 1 55.243 55.269 2 6.5639E-13 16319 20230619_1883_Aki_TMTPro18x_K_F4 244.71 174.45 399540 361570 361530 365700 400480 525670 438330 444280 577140 163990 154950 135270 131280 118830 297690 170220 161220 120040 369400 331020 371160 371240 414910 517390 443710 451920 561870 180730 178030 138440 142810 125740 291540 167850 155290 114700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 183270000 25236 1723 23681 47392;47393 38180;38181 38181 2 9606 Homo sapiens 0.09520100689087485 SNTPILVDGK Unmodified 1042.5659 0.56587452 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;B4DVJ0;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;A0A0J9YXP8;K7ERC6;K7EPY4;K7EP41 GPI Glucose-6-phosphate isomerase yes no 0 0 0 6 0 1 47.68 47.76 2 1.978E-13 12912 20230619_1886_Aki_TMTPro18x_K_F6 251.64 207.83 146700 107970 104030 117430 128360 221820 119710 124060 271470 142370 149120 178640 207050 182780 118710 262440 254970 237840 135240 98987 109760 119100 132270 213940 125750 133930 262720 144480 161310 180000 205570 192520 130570 260600 242510 226220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119050000 25237 1326 23682 47394 38182 38182 1 9606 Homo sapiens 0.04629421752088092 SNTPILVDGKDVMPEVNK Oxidation (M) 1970.9983 0.99829203 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;B4DVJ0;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;A0A0J9YXP8;K7ERC6;K7EPY4;K7EP41 GPI Glucose-6-phosphate isomerase yes no 0 1 1 6 0 1 50.853 50.93 3 0.00043938 14332 20230619_1886_Aki_TMTPro18x_K_F6 73.928 63.589 80227 65776 83101 75241 82330 61167 84808 75417 56435 95897 101840 72416 69953 58669 92195 60098 58753 47886 74206 60303 84076 75091 85313 63361 84555 76637 61039 94986 100820 74131 73378 61055 91337 59815 56462 45651 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21053000 25238 1326 23683 47395 38183;38184 38183 829 2 9606 Homo sapiens 0.05163281126783659 SNTSLPPLPFK Unmodified 1199.655 0.65502388 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 3.5 0.5 1 1 59.392 59.408 3 0.068026 18166 20230619_1882_Aki_TMTPro18x_K_F3 41.684 19.209 24856 22880 27148 27203 21161 28659 26827 25483 30850 30436 26220 28393 35437 26469 32451 37750 27769 34070 23019 20975 27304 27140 22645 28788 26851 26393 31036 30439 27544 28858 35703 27978 32824 37531 26658 32376 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62876000 25239 3588 23684 47396;47397 38185 38185 1 9606 Homo sapiens 0.06318256711597314 SNTSPEELGPLANQLTSDYGR Unmodified 2248.0608 0.060768941 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 5 0 1 59.43 59.484 2 3.182E-06 17683 20230619_1885_Aki_TMTPro18x_K_F5 110.77 101.95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25240 1292 23685 47398 38186 38186 1 9606 Homo sapiens -0.013339012712549447 SNVASSAACSSASSLGLGLAYR Unmodified 2128.0219 0.021881014 3949 Q16352 INA Alpha-internexin yes yes 0 0 0 3 0 1 55.05 55.094 3 4.2864999999999996E-38 16378 20230619_1882_Aki_TMTPro18x_K_F3 237.5 219.4 47841 40156 51905 46539 35127 38329 40566 39904 63461 43475 44425 34639 38273 34097 45321 44107 42453 46458 44276 36816 52092 46400 37991 39437 41314 40772 62520 43529 46146 35590 39610 35730 45800 44296 40674 44086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104240000 25241 3949 23686 47399 38187 38187 1 9606 Homo sapiens 0.0029909489335295802 SNVSDAVAQSTR Unmodified 1233.5949 0.59494282 3674 V9HWK1;P60174;P60174-3;B4DUI5;Q53HE2;P60174-4;Q2QD09 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 4.86 1.25 1 2 2 1 1 36.167 36.234 2 6.6179E-13 8181 20230619_1883_Aki_TMTPro18x_K_F4 234.24 207.56 709470 548830 562070 611250 744710 844170 696230 696390 987290 826330 918430 862790 928390 785610 761680 916060 1025600 826480 654670 503150 586290 615240 758900 832650 713600 724920 986130 829880 945290 871910 939550 819670 792780 913110 977400 786680 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5135000000 25242 3674 23687 47400;47401;47402;47403;47404;47405;47406 38188;38189;38190;38191;38192 38188 5 9606 Homo sapiens -0.012510856895914912 SNVSSPATPTASSSSSTTPTR Unmodified 2021.9502 0.95015586 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B7Z3E7;B3KVT9;H7BZY0 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 7 0 1 34.824 34.9 3 1.4865E-22 7265 20230619_1887_Aki_TMTPro18x_K_F7 172.83 162.01 1590.7 2102.8 2247.5 2469.1 1891.3 3024.1 3011 1998.7 4072.3 2846.5 3125.5 2608.2 3314.7 2184.7 1978.3 2217.1 2799.2 3752.8 1481.6 1925.6 2226.6 2469.6 2029.7 2990.4 2999.8 2138.7 4045.3 2828.7 3253.6 2643.9 3309.8 2275.5 2082 2312.1 2677 3544.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18539000 25243 1984 23688 47407 38193 38193 1 9606 Homo sapiens -0.019941212595313118 SNVSSPATPTASSSSSTTPTRK Unmodified 2150.0451 0.045118877 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B7Z3E7;B3KVT9;H7BZY0 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 1 2 0 1 35.034 35.09 3 6.0232E-17 7692 20230619_1881_Aki_TMTPro18x_K_F2 153.19 140.4 8513 6694.1 8815 8811.7 14932 13999 14576 13596 15805 7839 9527.8 13217 9073.3 8432.5 15213 10362 12764 13360 7872.1 6146.7 9022.3 8792.6 14994 13755 14740 13763 15755 8404.6 10091 13005 9574.1 8954.4 15200 10564 12240 12655 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24558000 25244 1984 23689 47408 38194 38194 1 9606 Homo sapiens 0.01609812211654571 SNYEAMIDR Unmodified 1097.4812 0.48115861 1957 A5YKK6;A5YKK6-2;A5YKK6-3;B4DYL7;H3BMZ2 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 3 0 1 44.496 44.569 2 0.0020162 11647 20230619_1882_Aki_TMTPro18x_K_F3 110.39 83.084 55922 49609 55857 62419 55811 65102 65442 59779 73024 70157 76531 81625 86243 71296 72963 69273 83533 86954 51736 45511 56795 62009 58261 65500 65655 61749 74101 70709 78810 81950 87067 73811 74987 70655 79845 82389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47420000 25245 1957 23690 47409 38195 38195 1 9606 Homo sapiens -0.06368272056170099 SNYNFEK Unmodified 900.39775 0.39774656 2668 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 RAN GTP-binding nuclear protein Ran yes no 0 0 0 6.29 1.03 2 2 2 1 43.697 43.77 2;3 0.0026229 10794 20230619_1887_Aki_TMTPro18x_K_F7 160.52 124.32 988960 690900 808640 905250 1085000 1111500 1008300 994980 1233100 1145400 1299000 1288700 1358600 1117500 798970 1102300 988620 1298900 912250 634680 841060 899030 1103200 1105800 1027900 1028500 1246000 1154200 1331300 1295600 1357700 1158000 834560 1118200 946220 1230500 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 7584999999.999999 25246 2668 23691 47410;47411;47412;47413;47414;47415;47416 38196;38197;38198;38199 38198 4 9606 Homo sapiens -0.05643640441712705 SNYNLPMHK Oxidation (M) 1118.5179 0.51787847 3558 Q59GY2;P36578;B4DMJ6;H3BM89;B4DMJ2 RPL4 60S ribosomal protein L4 yes no 0 1 0 4.5 3.5 1 1 37.92 37.913 3 0.0022118 8612 20230619_1888_Aki_TMTPro18x_K_F8 84.817 67.492 282140 205500 261460 326310 296950 300870 266390 287790 308310 306750 331550 352880 355770 297020 310760 361130 371750 330520 260550 189180 268160 319020 304710 305820 271830 295510 312770 310370 340260 354250 360200 311550 320410 360050 354820 314410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 546750000 25247 3558 23692 47417;47418 38200;38201 38201 2222 2 9606 Homo sapiens -0.036639754395991986 SNYNLPMHK Unmodified 1102.523 0.52296385 3558 Q59GY2;P36578;B4DMJ6;H3BM89;B4DMJ2 RPL4 60S ribosomal protein L4 yes no 0 0 0 2 0 1 42.354 42.434 3 0.00042855 10914 20230619_1881_Aki_TMTPro18x_K_F2 115.06 85.25 590030 474800 542600 538660 577940 630170 599520 617060 598190 665780 721770 683990 819190 578350 530600 783500 809880 705680 545160 435290 555620 540170 598030 630130 603500 632450 614840 670550 738370 690370 818630 611340 561380 778930 771460 671460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 893490000 25248 3558 23692 47419 38202 38202 1 9606 Homo sapiens -0.024196715769903676 SNYQLGELVK Unmodified 1149.603 0.60298831 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8 XPO7 Exportin-7 yes no 0 0 0 7 0 1 53.347 53.414 2 5.6317E-11 15092 20230619_1887_Aki_TMTPro18x_K_F7 197.79 132.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25249 2083 23693 47420 38203 38203 1 9606 Homo sapiens 0.034170932978668134 SPAAECLSEK Unmodified 1090.4965 0.49647433 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3;Q5CAQ4;I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 3.67 0.471 1 2 42.365 42.416 2;3 0.0004395 10576 20230619_1883_Aki_TMTPro18x_K_F4 125.57 63.607 143460 105360 132380 151300 148730 169300 156990 149900 202600 196110 210970 257750 272000 237480 150360 244550 323570 326250 132490 96867 135770 149170 153560 169340 159210 155770 204210 197670 218870 258020 270110 246080 165090 249900 307930 308990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 260000000 25250 1211 23694 47421;47422;47423 38204;38205 38205 2 9606 Homo sapiens -0.045154052589850835 SPAAPGQSPTGSVCYER Unmodified 1762.7944 0.79444726 88 O75534-4;O75534;A0A024R0E2;A0A8I5KPJ6;A0A8I5KPC0;A0A8I5KPQ8;A0A8I5KW29;A0A8I5KYL4 CSDE1 Cold shock domain-containing protein E1 yes no 0 0 0 6 0 1 39.848 39.936 2 0.0055556 9496 20230619_1886_Aki_TMTPro18x_K_F6 63.537 57.565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25251 88 23695 47424 38206 38206 1 9606 Homo sapiens -0.056438185240040184 SPACDPTVGVDFFSR Unmodified 1653.7457 0.74570615 3903 Q14964 RAB39A Ras-related protein Rab-39A yes yes 0 0 0 6 0 1 59.06 59.125 2 1.8122E-13 17757 20230619_1886_Aki_TMTPro18x_K_F6 177.1 164.49 34495 28318 28724 35291 21647 22459 24698 27961 24894 37627 32474 33278 37949 33529 33945 46935 36337 43243 31853 25983 29582 34900 23128 23824 24768 28453 25720 37348 33210 34003 38375 35282 34796 46700 34791 41086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35696000 25252 3903 23696 47425 38207 38207 1 9606 Homo sapiens -0.05501687093101282 SPAFTSR Unmodified 764.3817 0.38170256 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 7 0.816 1 1 1 34.638 34.676 2 0.020718 7356 20230619_1888_Aki_TMTPro18x_K_F8 104.21 57.838 130450 80810 127360 127830 160820 156240 135990 141570 174120 104120 148460 150350 122030 109300 165170 86757 173210 145820 120410 74440 130100 125540 163640 155480 139750 144650 173920 108750 152460 149090 127490 112940 167180 91114 165460 137980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105250000 25253 594 23697 47426;47427;47428 38208;38209 38209 2 9606 Homo sapiens -0.009913018879501578 SPAFVQLAPLSSK Unmodified 1343.7449 0.74490152 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 3.5 0.5 1 1 59.69 59.706 3 8.574E-05 18190 20230619_1883_Aki_TMTPro18x_K_F4 104.41 72.528 111070 85095 102330 113630 86436 108430 91075 110680 118280 112700 124540 110340 104020 99480 116750 119770 116940 122090 102590 78157 104500 112330 91343 110040 92512 112940 119170 113710 126510 111830 107490 104010 118530 120160 111920 115920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 151740000 25254 1331 23698 47429;47430 38210;38211 38211 2 9606 Homo sapiens 0.08677886320174366 SPAGLQVLNDYLADK Unmodified 1602.8253 0.82533668 271 A0A024R3W7;P24534;C9JZW3;F2Z2G2;F8WF65 EEF1B2 Elongation factor 1-beta yes no 0 0 0 5.33 3.09 1 1 1 62.992 63.021 3 0.0025792 19723 20230619_1880_Aki_TMTPro18x_K_F1 69.729 53.196 96424 74342 92056 109970 77758 96967 99369 88248 121200 111940 112300 107490 125230 106010 109150 120260 101390 125400 89095 68359 93785 107890 82604 98789 99601 91472 121860 111780 116160 109290 126620 110180 110920 120880 97252 118960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7664999999.999999 25255 271 23699 47431;47432;47433 38212;38213 38212 2 9606 Homo sapiens 0.04803702852564129 SPAGPAATPAQAQAASTPR Unmodified 1748.8806 0.88056015 1505 Q13428-4;A0A3B3IS06;Q13428-3;Q13428;Q13428-7;Q13428-6;Q13428-8;Q13428-2;E7ETY2;A0A6I8PRA0;B4DRA2;Q59FZ2 TCOF1 Treacle protein yes no 0 0 0 7 0 1 37.222 37.287 3 2.2981E-19 8161 20230619_1887_Aki_TMTPro18x_K_F7 170 159.19 21553 12126 20152 24483 25036 30636 28496 27416 28767 26744 31983 29188 30183 29383 31138 22048 32873 31479 19879 11215 20696 23760 25732 30406 28534 28213 29405 27148 32573 29522 30930 29914 31689 22837 31427 29804 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39798000 25256 1505 23700 47434 38214;38215 38215 2 9606 Homo sapiens 0.03607509373046014 SPAGSPELR Unmodified 912.46649 0.46649483 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 3.5 0.5 1 1 34.932 34.986 2 0.00077075 7456 20230619_1883_Aki_TMTPro18x_K_F4 123.98 67.861 40531 24455 36794 42905 61443 51796 53863 49821 67277 39016 55139 65722 49809 47491 54295 43516 77854 68486 37388 22562 38081 41893 61566 51666 55120 50770 67185 40868 56994 64852 51290 49373 56363 45227 74197 64818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38891000 25257 4372 23701 47435;47436 38216 38216 1 9606 Homo sapiens 0.006760238579886391 SPAIAAVGPIK Unmodified 1022.6124 0.61243078 2339 Q96CP5;B3KM34;O75439;Q9UG64;B3KQ85;A8K1E9 PMPCB;DKFZp586I1223 Mitochondrial-processing peptidase subunit beta yes no 0 0 0 2 0 1 51.303 51.348 3 0.0054077 15019 20230619_1881_Aki_TMTPro18x_K_F2 70.942 20.335 74221 54190 66997 69288 72006 81844 79487 73375 91531 58667 59114 51766 60789 49898 66294 66993 61226 59118 68529 49759 68754 68893 74644 81598 80047 75169 91174 59946 62226 52870 62249 52442 67039 66607 58615 56242 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100890000 25258 2339 23702 47437 38217 38217 1 9606 Homo sapiens 0.10202906374047416 SPAITATLEGK Unmodified 1086.5921 0.59208927 2301 J3JZZ9;B2RBP3;Q8TBC4;Q8TBC4-2;F8W8D4;B7Z5F6 UBE1C;UBA3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 7 0 1 51.132 51.209 3 0.00019749 14163 20230619_1887_Aki_TMTPro18x_K_F7 92.866 43.885 90809 75299 76093 103010 97747 106600 95996 95766 113390 92039 118740 102390 108750 98374 104480 110390 120580 103470 83863 69157 79009 101730 99818 107250 97422 98519 114640 93594 121020 103450 111150 102200 107230 110350 115100 98414 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276470000 25259 2301 23703 47438 38218 38218 1 9606 Homo sapiens 0.05225690923566617 SPAPKPSDLRPGDVSSK Unmodified 1736.9057 0.90571227 3798 Q05682-5;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;B4E3I0;A0A6Q8PGI1;Q7Z2Y9 CALD1;DKFZp686P03208 Caldesmon yes no 0 0 2 1 0 1 41.179 41.179 4 0.0022664 10591 20230619_1880_Aki_TMTPro18x_K_F1 71.742 53.146 364910 323370 342570 362320 557390 497160 467980 452610 428750 444750 503600 420970 446020 348580 491710 405820 422210 333060 337430 296330 353080 364540 558490 491850 475790 465130 442200 449080 510270 426230 458820 365020 494860 403200 404020 317440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 311200000 25260 3798 23704 47439 38219;38220 38219 2 9606 Homo sapiens 0.066735641755713 SPAPPLLHVAALGQK Unmodified 1497.8667 0.86674799 2414 B3KTJ9;Q8N163-2;Q8N163;H0YC69;E5RFJ3;H0YC58;E5RGU7 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 4.5 0.5 1 1 53.112 53.158 3 7.6645E-12 15395 20230619_1883_Aki_TMTPro18x_K_F4 169.04 131.02 87897 77926 87554 95050 90473 104510 107210 97622 99455 99600 103500 98314 119150 96877 100050 108410 95641 112970 81315 71467 89076 94706 94183 104800 106880 100290 101950 100520 106660 99855 120150 100630 101880 109000 91671 107190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 440760000 25261 2414 23705 47440;47441 38221 38221 1 9606 Homo sapiens 0.1377292840256814 SPASDTYIVFGEAK Unmodified 1483.7195 0.71947463 648 F8VZJ2;A0A7I2V2K5;A0A024RB41;H0YHX9;A0A7I2V473;Q13765;E9PAV3-2;E9PAV3;F8W0W4;F8VNW4;B4DDI8 NACA;hCG_2016482 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 0 0 5.5 0.5 1 1 57.443 57.509 2 2.2860999999999997E-28 17057 20230619_1886_Aki_TMTPro18x_K_F6 312.69 275.93 241630 195840 211280 231670 192560 225350 225900 218020 223630 270510 250270 250230 300750 243060 240540 326040 280050 297130 223180 179610 217000 230960 202520 228210 225850 224690 229320 269890 257710 254810 302420 255400 248320 324420 267690 282460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 228730000 25262 648 23706 47442;47443 38222;38223 38223 2 9606 Homo sapiens -0.0030363299292730517 SPASDTYVVFGEAK Unmodified 1469.7038 0.70382456 3233 O15069 NACAD NAC-alpha domain-containing protein 1 yes yes 0 0 0 5 0 1 55.425 55.489 3 0.0048786 16035 20230619_1885_Aki_TMTPro18x_K_F5 69.92 56.257 58177 46898 49799 55819 49414 67046 58605 56839 99566 67120 65041 65413 72992 59169 57358 76944 69378 78311 53725 43015 51333 55778 51807 66684 59778 59048 97638 67327 68674 66286 73509 62203 59376 77049 66326 74333 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46283000 25263 3233 23707 47444 38224 38224 1 9606 Homo sapiens -0.012239195099482458 SPATSAGPELAGLPR Unmodified 1422.7467 0.74669243 1902 A1L020 MEX3A RNA-binding protein MEX3A yes yes 0 0 0 7 0 1 48.66 48.747 2 4.0503E-14 12985 20230619_1887_Aki_TMTPro18x_K_F7 190.46 151.44 34842 27764 35220 43332 43033 44354 45281 43053 47816 43885 43436 48024 49381 43861 46317 51372 47991 50528 32215 25543 35914 42463 44108 44732 45592 44112 48403 44441 45073 48420 50080 45765 47273 51446 45919 47992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31833000 25264 1902 23708 47445 38225 38225 1 9606 Homo sapiens 0.052228953381245447 SPAVATSTAAPPPPSSPLPSK Unmodified 1959.0313 0.031306713 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;Q14157-1;Q14157-4;B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like no no 0 0 0 2 0 1 49.564 49.623 3 0.00085232 14266 20230619_1881_Aki_TMTPro18x_K_F2 70.99 54.684 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25265 3877;3878 23709 47446 38226 38226 1 9606 Homo sapiens 0.09015231241164656 SPCPEAAAPPPGPR Unmodified 1402.6663 0.66633362 4161 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 4.5 0.5 1 1 37.481 37.549 3 0.071242 8517 20230619_1885_Aki_TMTPro18x_K_F5 35.809 22.609 39490 22599 56717 48344 71425 51604 52296 63044 45402 43468 59061 51632 44548 44615 52752 25801 54217 43665 36579 20920 56309 46741 72224 52218 53701 63058 47184 45193 59290 51801 46349 45251 53422 27332 51788 41323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36042000 25266 4161 23710 47447;47448 38227 38227 1 9606 Homo sapiens -0.0188928925658729 SPDEAYAIAK Unmodified 1063.5186 0.51858998 1360 Q9P2R7;Q9P2R7-2;A0A2R8Y6Y7;Q6N0B1;E5KS55;E5KS60;A0A2R8YDQ9;B4DRV2;B7ZAF6;Q7Z503;A0A2R8Y6E6;A0A2R8Y5P6;A0A0U1RQF8;A0A2R8Y5P4;A0A0U1RQU7 SUCLA2;DKFZp686D0880 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial;Succinyl-CoA ligase subunit beta yes no 0 0 0 4 0 1 47.462 47.504 2 0.00051091 12874 20230619_1883_Aki_TMTPro18x_K_F4 138.98 98.93 83934 68223 77491 89141 88805 98650 95209 90441 111290 114890 107810 104850 124590 100050 76283 135370 131130 111140 77559 62631 79501 88401 91554 98841 96105 93621 112400 114510 111420 106780 124350 105230 81765 133940 124790 105890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58241000 25267 1360 23711 47449 38228 38228 1 9606 Homo sapiens -0.010628575189230105 SPDEEDYDYESYEK Unmodified 1767.6635 0.66353547 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 1.5 0.5 1 1 49.594 49.623 3 4.8037E-07 14167 20230619_1880_Aki_TMTPro18x_K_F1 136.01 125.38 161280 114230 131150 170230 151380 172210 143430 148040 169360 214410 242180 294480 240430 227370 252290 238990 262820 340870 148780 105090 136260 167200 155580 173390 145970 154760 174140 215470 245380 292780 246130 237370 256870 245710 251900 322390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1383900000 25268 630 23712 47450;47451 38229;38230 38229 2 9606 Homo sapiens -0.18958975481723428 SPDFTNENPLETR Unmodified 1518.6951 0.69505079 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 2.5 0.5 1 1 50.366 50.441 2 5.7942E-15 14286 20230619_1882_Aki_TMTPro18x_K_F3 197.43 156.4 85412 61992 70322 82533 89750 112190 109150 101110 124260 97589 101840 113740 114500 93982 110790 114160 110120 120390 78807 56948 73099 82014 92353 110880 109310 103960 124760 99362 106200 114050 116270 98678 112700 114740 105440 114250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 247230000 25269 3387 23713 47452;47453 38231;38232 38232 2 9606 Homo sapiens -0.04354893146455652 SPDGAGRPWCFYGDAR Unmodified 1810.7846 0.78455128 3669 P56730;Q96I80 PRSS12 Neurotrypsin yes no 0 0 1 8 0 1 47.576 47.634 3 0.0021698 12523 20230619_1888_Aki_TMTPro18x_K_F8 94.461 84.179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25270 3669 23714 47454 38233 38233 1 9606 Homo sapiens -0.08840961738724218 SPDKPGGSPSASR Unmodified 1241.6 0.60002819 4730 Q9Y3T9;B3KNC3 NOC2L Nucleolar complex protein 2 homolog yes no 0 0 1 7 0 1 31.047 31.145 3 0.002476 5796 20230619_1887_Aki_TMTPro18x_K_F7 62.377 47.958 20773 13398 35109 28620 66604 64848 44472 57924 48514 23425 41933 61455 33887 40141 52822 14248 49634 53833 19293 12395 34899 28106 65989 62635 46271 58666 48847 26697 43155 59842 35816 40717 52986 17081 47550 50696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37578000 25271 4730 23715 47455 38234 38234 1 9606 Homo sapiens -0.01110781826969287 SPDLAPTPAPQSTPR Unmodified 1533.7787 0.77872084 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;Q9BY44-2 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 5.67 0.471 1 2 41.442 41.532 2;3 1.4712E-05 10182 20230619_1886_Aki_TMTPro18x_K_F6 151.79 117.41 135730 75027 196430 172570 225740 216660 201560 226290 165720 157390 235060 226470 170960 186680 240860 99536 263550 217340 125720 69557 194740 166740 230960 215830 203740 228590 173480 164760 235210 225310 180100 189220 244120 108510 251620 205350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 523570000 25272 4468 23716 47456;47457;47458 38235;38236 38236 2 9606 Homo sapiens 0.03318263021242274 SPDLEPVLR Unmodified 1024.5553 0.55530983 2773 CON__P01044-1;CON__Q2KJ62;CON__P01045-1 yes no 0 0 0 3.5 0.5 1 1 48.384 48.443 2 0.0015344 13238 20230619_1883_Aki_TMTPro18x_K_F4 114.89 63.928 + 248320 221080 244840 265580 372030 494380 317350 324600 563980 268120 354810 409000 298910 292830 364580 432820 640160 891500 229710 202720 251170 267360 376090 478370 330460 341720 551130 279040 371830 405070 310800 313870 385230 457770 611580 840970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 291370000 25273 2773 23717 47459;47460 38237;38238 38238 2 0.044014390976599316 SPDMLAHFR Unmodified 1072.5124 0.51239916 1171 O43747-2;O43747;B3KXW5;A0A140VJE7;Q8IY97;B4DS96;B4DDL1;H3BNR4 AP1G1 AP-1 complex subunit gamma-1 yes no 0 0 0 8 0 1 45.326 45.354 3 0.0079074 11625 20230619_1888_Aki_TMTPro18x_K_F8 70.028 60.373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25274 1171 23718 47461 38239 38239 1 9606 Homo sapiens -0.020956542314252147 SPDNPMNQR Unmodified 1057.4611 0.46109187 465 Q96CT7;A0A024R7M8 CCDC124;LOC115098 Coiled-coil domain-containing protein 124 yes no 0 0 0 3.5 0.5 1 1 33.863 33.923 2 0.0017267 7075 20230619_1883_Aki_TMTPro18x_K_F4 131.41 87.601 75959 52162 72475 73717 82453 86473 73573 72627 98277 89371 99804 96318 98488 85700 87552 85493 123470 99196 70140 47961 74053 72817 84635 86155 75478 75607 98767 89678 102230 97085 100090 88753 91175 86703 117620 94161 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 62319000 25275 465 23719 47462;47463 38240;38241 38241 2 9606 Homo sapiens -0.06534022996129352 SPDPDPNLSHDR Unmodified 1348.6008 0.60075648 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;H0Y9Y3;Q9UMS6;Q9UMS6-3 SYNPO2 Synaptopodin-2 yes no 0 0 0 1.5 0.5 1 1 33.131 33.16 3 6.1084E-08 6955 20230619_1881_Aki_TMTPro18x_K_F2 152.23 138.26 15155 13369 16121 20241 26448 29975 26205 24984 29663 22020 33830 29912 31355 29516 23250 29231 31981 34025 14028 12290 16483 19984 26651 29442 26530 25789 30144 22677 34365 30027 31718 30433 24300 29632 30529 32259 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98182000 25276 4686 23720 47464;47465 38242 38242 1 9606 Homo sapiens -0.05959987177925541 SPDSDVAATLKK Unmodified 1230.6456 0.6455814 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 1 7 0 1 46.147 46.235 3 0.073111 11836 20230619_1887_Aki_TMTPro18x_K_F7 40.287 20.547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25277 817 23721 47466 38243 38243 1 9606 Homo sapiens 0.03948443635408694 SPDTILQK Unmodified 900.49165 0.49164694 2657 Q6IBR8;B5BU01;P20042;Q96I16 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 6 0 1 47.93 48.009 2 0.0044648 12984 20230619_1886_Aki_TMTPro18x_K_F6 116.37 55.583 58697 45578 50176 54455 63594 61728 60238 58293 79005 74307 76155 67032 79227 67687 69468 79624 85006 76725 54193 41812 51895 54364 64890 61822 61499 60212 79320 74050 78329 68440 80317 70436 71721 79635 81125 72935 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62831000 25278 2657 23722 47467 38244 38244 1 9606 Homo sapiens 0.037420786605594 SPDTNYLFMGDYVDR Oxidation (M) 1807.7723 0.77231483 1200 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;P67775;B3KUN1;Q6I9T8;A0A8V8TRB3;B3KQ51;P67775-2;E5RHC1;E7ESG8;A0A8V8TRA6;E5RFI3;B7Z2C5 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes no 0 1 0 3.5 0.5 1 1 56.443 56.465 2 3.7648E-05 17006 20230619_1882_Aki_TMTPro18x_K_F3 110.08 95.386 39653 34309 33860 41648 46177 38745 34555 35000 34092 44142 49703 49565 47793 45296 43814 52494 46246 60085 36635 31466 35085 41410 46592 39358 35527 36278 35435 44270 50176 49936 48671 47235 44812 53032 44320 56938 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85235000 25279 1200 23723 47468;47469 38245;38246 38245 735 2 9606 Homo sapiens -0.099260429924243 SPDTNYLFMGDYVDR Unmodified 1791.7774 0.77740021 1200 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;P67775;B3KUN1;Q6I9T8;A0A8V8TRB3;B3KQ51;P67775-2;E5RHC1;E7ESG8;A0A8V8TRA6;E5RFI3;B7Z2C5 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes no 0 0 0 4.5 0.5 2 2 61.451 61.477 2;3 1.2681E-05 18540 20230619_1885_Aki_TMTPro18x_K_F5 91.657 79.297 205320 158700 168600 179690 175620 200320 194370 190430 219300 178070 181700 197190 198320 180490 215760 233470 201670 216360 189500 145510 174500 180060 182530 200790 195640 194930 220410 181290 189110 198830 202800 189430 218430 232760 193200 205630 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 679340000 25280 1200 23723 47470;47471;47472;47473 38247;38248;38249 38249 3 9606 Homo sapiens -0.08681739129792732 SPDVGLYGVIPECGETYHSDLAEAK Unmodified 2706.2483 0.24831171 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;A0A0J9YXZ5;Q6P1N4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 5 0 1 58.629 58.685 4 1.2063E-05 17350 20230619_1885_Aki_TMTPro18x_K_F5 92.147 84.343 66015 48135 64537 60585 62946 67953 70883 66994 74633 40314 44965 32178 39995 30641 61527 42439 41805 37240 60989 44192 65633 60276 65704 68128 71113 67806 74513 41985 47281 33070 41972 32299 60991 42228 40158 35443 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37878000 25281 707 23724 47474 38250 38250 1 9606 Homo sapiens -0.03656250848825948 SPEACCELTLQPLR Unmodified 1672.7913 0.79127614 1273 H0Y5R6;A0A494C0S8;A0A1B0GVN9;A0A494C0Q8;P06132;A0A494C1D8;Q5T446;A0A494BZY8;A0A1B0GVZ4;A0A494C1T3;A0A494C007 UROD Uroporphyrinogen decarboxylase yes no 0 0 0 5 0 1 52.316 52.39 2 4.1218E-11 14764 20230619_1885_Aki_TMTPro18x_K_F5 174.24 141.3 21205 18101 19944 17076 19869 19519 24056 20102 21680 24046 25367 22368 28484 25091 22752 27890 29179 30456 19603 16565 20346 17385 20728 19586 23936 20608 22380 24041 25968 22894 28709 25945 23619 28109 27865 28895 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44181000 25282 1273 23725 47475 38251 38251 1 9606 Homo sapiens -0.01820784902338346 SPEACCELTLQPLRR Unmodified 1828.8924 0.89238717 1273 H0Y5R6;A0A494C0S8;A0A1B0GVN9;A0A494C0Q8;P06132;A0A494C1D8;Q5T446;A0A494BZY8;A0A1B0GVZ4;A0A494C1T3;A0A494C007 UROD Uroporphyrinogen decarboxylase yes no 0 0 1 7.5 0.5 1 1 46.178 46.241 3 5.402299999999999E-19 11843 20230619_1887_Aki_TMTPro18x_K_F7 209.41 171.46 143780 112820 134060 128260 130630 148800 156060 151870 159340 171430 155900 168910 178620 147790 161250 192240 189910 175450 132840 103440 136920 128600 136670 149000 156000 155440 162130 172090 161220 170850 180760 155500 166020 191450 181330 166870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 128840000 25283 1273 23726 47476;47477 38252;38253 38252 2 9606 Homo sapiens 0.01109666800357445 SPEDHIGAVLER Unmodified 1321.6626 0.66262845 3869 Q5T0F3;Q13823 GNL2 Nucleolar GTP-binding protein 2 yes no 0 0 0 3.5 0.5 1 1 42.901 42.956 3 0.0023556 10900 20230619_1882_Aki_TMTPro18x_K_F3 78.744 57.874 74749 64136 76835 80791 75693 77132 81719 76545 90501 84927 79398 89967 94107 78769 75763 100370 90473 89995 69155 58846 77875 80179 78818 78285 82322 78502 91290 85545 82693 90709 94718 82749 78311 99870 86418 85589 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86581000 25284 3869 23727 47478;47479 38254 38254 1 9606 Homo sapiens 0.014663642412187983 SPEDLER Unmodified 844.39266 0.39266118 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;B4DVJ0;Q8N196 GPI;SIX5 Glucose-6-phosphate isomerase;Homeobox protein SIX5 yes no 0 0 0 1 0 1 35.987 35.987 2 0.033749 8317 20230619_1880_Aki_TMTPro18x_K_F1 93.561 42.104 136090 81438 129460 144170 184830 206120 156370 168150 205730 136250 202610 197370 181100 164370 174140 124310 230120 190080 125580 75147 132990 141100 186960 202720 160850 173510 206360 141430 207030 196450 185310 168530 179980 129440 219360 179990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 474620000 25285 1326 23728 47480 38255 38255 1 9606 Homo sapiens -0.035759443043275496 SPEEESRPPPDLAR Unmodified 1578.7638 0.76379906 4457 Q9BWH6;Q9BWH6-2;H3BRE8;A8K2F9 RPAP1 RNA polymerase II-associated protein 1 yes no 0 0 1 2 0 1 35.19 35.247 3 0.0010135 7769 20230619_1881_Aki_TMTPro18x_K_F2 116.19 85.75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25286 4457 23729 47481 38256 38256 1 9606 Homo sapiens -0.0024322884669345513 SPEEGAETPVYLALLPPDAEGPHGQFVSEK Unmodified 3163.535 0.53497491 1468 A0A384NL53;P16152 CBR1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 4.5 0.5 1 1 62.028 62.055 4 1.1776E-14 18822 20230619_1885_Aki_TMTPro18x_K_F5 124.79 116.62 52653 38575 52370 48247 42370 58886 49109 50047 50566 62833 73656 67659 68047 61349 62726 69668 72342 78279 48653 35412 53057 48076 45075 58505 49223 52075 52376 62947 74195 68279 69392 63930 64450 70339 69164 74237 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 626470000 25287 1468 23730 47482;47483 38257;38258 38258 2 9606 Homo sapiens 0.03974881854264822 SPEEVDKESQR Unmodified 1302.6052 0.60517315 2830 D3DVC4;P48681 NES Nestin yes no 0 0 1 1.5 0.5 1 1 33.919 33.947 3 0.00016763 7261 20230619_1881_Aki_TMTPro18x_K_F2 117.79 106.98 28333 14214 46454 34201 65970 62458 73026 77709 54017 46918 69476 47341 44812 26249 85539 10975 26006 12956 26274 13196 45917 33276 66964 61324 72640 77431 56641 49022 69415 47347 48277 27020 82561 11647 25367 12332 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62763000 25288 2830 23731 47484;47485 38259 38259 1 9606 Homo sapiens -0.03402522755004611 SPEPEVLSTQEDLFDQSNK Unmodified 2162.0015 0.0015227276 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B7Z3E7;A8KA50;C9JXV0 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 3 0 1 59.529 59.559 3 9.6186E-05 18234 20230619_1882_Aki_TMTPro18x_K_F3 81.723 70.907 31901 26874 35530 37517 28762 36401 35943 37568 45354 44208 45982 55840 47012 44824 45221 63329 55872 70707 29531 24686 35707 36994 30643 36901 36132 38484 45693 44672 47262 55784 47913 47560 46711 63689 53457 67025 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5972200 25289 1984 23732 47486 38260;38261 38260 2 9606 Homo sapiens -0.032997972854445834 SPEQQLSATQK Unmodified 1215.6095 0.60953025 3632 Q5BKZ2;P52294;C9JYI4;C9J352;C9JWD9;F2Z3G4;C9J4U1 KPNA1 Importin subunit alpha;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes no 0 0 0 6 0 1 41.084 41.178 3 0.0084066 10023 20230619_1886_Aki_TMTPro18x_K_F6 75.739 58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25290 3632 23733 47487 38262 38262 1 9606 Homo sapiens 0.010349864585805335 SPETGTAGGSSTASYSAGR Unmodified 1742.7707 0.77073493 3035 Q8NFC6;H0Y9Y2;B4DNZ8 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes no 0 0 0 4 0 1 34.37 34.421 3 9.5434E-20 7295 20230619_1883_Aki_TMTPro18x_K_F4 184.21 172.44 6013.2 3703.2 4996.9 5048.9 5185.7 8367.1 6478.9 5771.7 7393.9 7119.4 6994.9 8757.1 8506.1 6772 6183.1 7618 8456.5 8361.8 5543.9 3405.3 5167.9 5028.4 5430.6 8140.6 6483.1 6111.9 7466.4 7175.3 7271.4 8740.1 8522 7097.6 6461.2 7679.7 8068.5 7934.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28041000 25291 3035 23734 47488 38263 38263 1 9606 Homo sapiens -0.07093960756765227 SPEVLLGSAR Unmodified 1027.5662 0.56620887 56 A0A024QZP7;Q5H9N4;P06493;I6L9I5;A0A024QZJ8;P06493-2;E5RIU6 CDC2;DKFZp686L20222;CDK1 Cyclin-dependent kinase 1 yes no 0 0 0 7.5 0.5 1 1 47.847 47.92 2 0.00066013 12554 20230619_1887_Aki_TMTPro18x_K_F7 119.21 86.316 303450 262720 288510 278370 279370 361920 334410 312570 374610 334790 335470 270120 350610 251180 299900 341880 308150 278220 280580 240650 294220 281070 292860 358460 335180 323280 377710 335330 346230 276810 354620 264710 306530 338430 294550 265040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 392500000 25292 56 23735 47489;47490 38264;38265 38264 2 9606 Homo sapiens 0.05352841471949432 SPEYPEGR Unmodified 933.41921 0.41921028 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 1.5 0.5 1 1 33.226 33.255 2 0.016822 6956 20230619_1881_Aki_TMTPro18x_K_F2 91.853 72.759 69708 44837 89316 74834 62493 65120 65057 70282 66525 79017 109320 100260 104110 91015 85828 61995 115160 98554 64521 41325 88583 72989 67013 66684 65629 71699 69390 79999 109840 100470 105560 92691 89067 64910 109790 93281 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77048000 25293 3833 23736 47491;47492 38266 38266 1 9606 Homo sapiens -0.05016255412999726 SPFAEGTSAR Unmodified 1021.4829 0.48287317 3220 O14578;O14578-4;O14578-2 CIT Citron Rho-interacting kinase yes no 0 0 0 4.5 0.5 1 1 38.484 38.551 2 0.0020318 8941 20230619_1885_Aki_TMTPro18x_K_F5 98.055 62.61 24533 17077 20205 22611 23995 28645 26439 23400 26089 27917 28209 27198 38572 28738 20905 29124 28794 26771 22631 15690 20961 22450 24711 28379 26498 24394 26706 27959 29269 27698 38171 29631 22047 29110 27460 25459 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28773000 25294 3220 23737 47493;47494 38267 38267 1 9606 Homo sapiens -0.027008949758965173 SPFEQHIK Unmodified 984.50288 0.50288033 4292 Q92520 FAM3C Protein FAM3C yes yes 0 0 0 7 0 1 41.547 41.618 3 0.0078846 9913 20230619_1887_Aki_TMTPro18x_K_F7 81.95 31.041 113260 92535 102930 112410 120200 140530 136630 127870 156910 144570 163770 173470 183820 141060 133080 211150 204080 190360 104650 84886 105770 112250 124030 139660 137390 131970 158940 146120 168580 173800 184530 150300 140560 209640 194480 181070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34280000 25295 4292 23738 47495 38268 38268 1 9606 Homo sapiens 0.010009007547068904 SPFEVYVDK Unmodified 1082.5284 0.52842638 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98 FLNA Filamin-A yes no 0 0 0 5.5 0.957 1 2 2 1 57.309 57.362 2;3 0.00032657 17009 20230619_1886_Aki_TMTPro18x_K_F6 139.78 87.201 472550 402560 425510 471260 529020 618000 533720 537180 607860 592180 612440 662200 643680 578110 643270 635510 625490 713140 436710 369090 438060 472170 541880 611880 540130 555740 615390 597760 629980 666020 656080 602100 653130 642130 599250 676200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 840080000 25296 3484 23739 47496;47497;47498;47499;47500;47501 38269;38270;38271 38270 3 9606 Homo sapiens -0.009536695135238915 SPFSVAVSPSLDLSK Unmodified 1532.8086 0.80862399 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 0 1.5 0.5 1 1 62.032 62.037 3 9.6629E-06 19494 20230619_1881_Aki_TMTPro18x_K_F2 113.59 95.174 166620 140850 149380 161760 168060 207650 170450 168210 210000 191400 196990 180690 212480 159340 195000 187600 218850 204750 153960 129120 153560 162230 173430 205560 172940 175170 211170 191950 203290 183230 215410 166720 199860 189060 209060 194340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1379700000 25297 3484 23740 47502;47503 38272 38272 1 9606 Homo sapiens 0.06353201966612687 SPFTVGVAAPLDLSK Unmodified 1500.8188 0.81879474 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 2 0 1 62.487 62.496 3 0.00059219 19752 20230619_1881_Aki_TMTPro18x_K_F2 83.633 61.76 34037 33822 39509 34629 35287 41402 46789 42305 46981 38881 37931 34659 39109 37158 41650 43224 41512 45347 31557 30957 39598 35029 37285 41381 46505 43066 47465 39369 39391 35489 40030 38562 42311 43453 39746 43034 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93283000 25298 3299 23741 47504 38273 38273 1 9606 Homo sapiens 0.08841809691830349 SPGAAGLTSR Unmodified 915.47739 0.47739386 2978 F6TR53;Q9H7U7;Q53T59 HS1BP3 HCLS1-binding protein 3 yes no 0 0 0 7 0.816 1 1 1 34.152 34.194 2 0.0013774 7165 20230619_1888_Aki_TMTPro18x_K_F8 108.15 87.587 62385 38295 58254 70863 79125 90712 72715 77399 92879 56335 88216 86998 74721 72665 80707 43832 101820 86084 57564 35355 59915 69062 80433 89841 74308 79431 93114 59071 90138 86410 77056 73908 82909 47008 97110 81373 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67972000 25299 2978 23742 47505;47506;47507 38274;38275 38275 2 9606 Homo sapiens 0.016274262322781397 SPGADLLQVLTK Unmodified 1240.7027 0.70270235 316 A0A140VJH7;A0A024R529;Q3LXA3;Q9UFX5;I3L252;H0YCY6;Q3LXA3-2 DAK;DKFZp586B1621;TKFC Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes no 0 0 0 2 0 1 63.263 63.271 3 1.9653E-05 20093 20230619_1881_Aki_TMTPro18x_K_F2 124.6 102.02 40680 36913 43191 42397 44443 50725 48765 49876 54092 51541 60242 55106 52095 53968 63007 54819 56469 62144 37660 33831 43685 42492 46187 50643 49099 51046 55026 52117 61153 55765 53999 55719 63474 55517 54132 58926 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86371000 25300 316 23743 47508 38276 38276 1 9606 Homo sapiens 0.09197910911780127 SPGAPGPLTLK Unmodified 1036.5917 0.59169534 3947 Q15942;Q96AF9;Q28617;B4DY85;H0Y2Y8;Q9BUS0;Q15942-2;B4DQR8;C9JJK5 ZYX Zyxin yes no 0 0 0 2 0 1 50.386 50.437 3 1.2623E-06 14643 20230619_1881_Aki_TMTPro18x_K_F2 159.94 100.14 75546 64113 74310 89741 89966 111710 126020 126800 151760 126170 103440 109190 137780 97986 102430 140120 115940 113300 69862 58894 75981 88788 93289 111570 125660 128420 151210 127060 109920 111260 137750 103740 105740 138510 110780 107900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194440000 25301 3947 23744 47509 38277 38277 1 9606 Homo sapiens 0.07486315994378856 SPGEPGGAAPER Unmodified 1123.5258 0.52580062 57 A0A024QZQ1;Q96EB6;Q96EB6-2 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes no 0 0 0 2 0 1 30.849 30.915 2 0.0025031 6084 20230619_1881_Aki_TMTPro18x_K_F2 91.584 75.446 6004.9 3220.5 8940.8 9232.4 11242 9599.4 8142.1 10750 10021 7836.8 12461 13438 8206.2 10825 10155 4905.2 12665 11679 5563.1 2999.8 8869.3 8824.2 11385 9699.9 8460.2 10821 10185 8245.7 12492 13286 8629.8 10927 10401 5423.7 12087 11024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3927500 25302 57 23745 47510 38278 38278 1 9606 Homo sapiens -0.03102124918473237 SPGETSKPRPFAGGGYR Unmodified 1762.8751 0.87508084 3993 Q53FE8;Q9UNZ2;Q9UNZ2-5;Q53FF5;F2Z2K0;Q9UNZ2-6 NSFL1C NSFL1 cofactor p47 yes no 0 0 2 4 0 1 37.412 37.456 4 0.067475 8508 20230619_1883_Aki_TMTPro18x_K_F4 45.342 34.228 67341 61181 68685 66726 90079 82557 95419 89636 88374 87675 86955 69444 90046 63530 82242 77618 86805 61209 62322 56046 69968 67186 91831 82504 95654 91004 90407 88140 89313 71179 91340 66527 83980 76886 82833 58405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40504000 25303 3993 23746 47511 38279 38279 1 9606 Homo sapiens 0.02415830581207956 SPGLYFLTAGDQGTLR Unmodified 1694.8628 0.86278482 3820 Q12788;A0JLS5;J3KNP2 TBL3 Transducin beta-like protein 3 yes no 0 0 0 2 0 1 61.783 61.792 2 6.6671E-11 19412 20230619_1881_Aki_TMTPro18x_K_F2 208.08 179.87 42351 39473 39872 43688 36857 47171 45191 43015 47314 49057 46652 49549 52139 48206 50418 49635 49586 54695 39176 36162 40698 43829 38798 47338 45151 44404 48077 49275 48168 50214 52980 49839 51249 50148 47487 51877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53091000 25304 3820 23747 47512 38280 38280 1 9606 Homo sapiens 0.04314794118158716 SPGSTPTTPTSSQAPQK Unmodified 1670.8111 0.81114318 511 A0A8Q3SHZ4;A0A494C1F2;A0A024R8B6;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A8Q3WLX1 NUP214 Nuclear pore complex protein Nup214 yes no 0 0 0 7.5 0.5 1 1 38.272 38.296 3 1.5629E-06 8590 20230619_1887_Aki_TMTPro18x_K_F7 112.5 95.432 20025 11791 21517 23054 28931 27213 20239 25434 29158 23931 31127 36621 26748 28751 32444 18537 35807 37699 18495 10897 21843 22390 29208 27153 21207 26058 29261 24658 31698 36289 27752 29371 32997 19912 34240 35597 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 59065000 25305 511 23748 47513;47514 38281;38282;38283 38281 3 9606 Homo sapiens 0.0025700563360260276 SPGTRPEDEAEGKPPQR Unmodified 1849.8919 0.89185312 207 C9JPV1;B4E140;Q59GD7;A0A087WYN0;A0A024R2N0;A0A087WY96;P31641-2;P31641 SLC6A6 Transporter;Sodium- and chloride-dependent taurine transporter yes no 0 0 2 3 0 1 31.576 31.655 4 0.006448 6260 20230619_1882_Aki_TMTPro18x_K_F3 69.188 57.497 23334 19960 27504 22617 32907 35725 22437 27930 29687 36451 36236 30783 44279 31196 26094 53174 42498 36283 21614 18295 27635 22804 33473 34958 23490 29264 30152 36209 37156 31584 44042 33336 27908 52050 40460 34664 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15245000 25306 207 23749 47515 38284;38285 38284 2 9606 Homo sapiens 0.0009028667650454736 SPHVFYR Unmodified 904.45554 0.45553621 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;A0A994J583;A0A994J7K1 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 0 2 0 1 34.862 34.918 3 0.01105 7642 20230619_1881_Aki_TMTPro18x_K_F2 82.913 59.356 28978 29914 42792 35828 45765 50043 43224 43044 35062 41328 47809 61268 48765 41824 52649 31507 59701 63060 26944 27416 42323 35897 47163 49366 43511 44412 36723 42434 48611 60540 49925 43274 53736 33661 57076 59548 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7857400 25307 1867 23750 47516 38286 38286 1 9606 Homo sapiens -0.0005133372562795557 SPIAEAVFR Unmodified 988.53418 0.53418046 3500 Q59EH3;P24666;G5E9R5;A0A140VK37;P24666-4;P24666-3;P24666-2;F2Z2Q9;O75702;D3YTI2 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes no 0 0 0 7.5 0.5 1 1 52.337 52.412 2 0.0053596 14547 20230619_1888_Aki_TMTPro18x_K_F8 95.358 63.986 1200000 1004400 1048700 1117100 1035500 1192200 1131200 1106600 1274700 1199900 1137700 1244700 1304300 1135200 1052800 1484500 1360500 1470600 1108600 920510 1078100 1120200 1080100 1198100 1139600 1139100 1285300 1209200 1181600 1258000 1314600 1193000 1094400 1484000 1299500 1396500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 917300000 25308 3500 23751 47517;47518 38287;38288 38288 2 9606 Homo sapiens 0.03945473788803611 SPIAPEELALVHNLR Unmodified 1657.9152 0.91515474 3623 P51398-2;P51398-3;P51398;V9GYL9;V9GZ03;V9GYJ9;V9GYW1;V9GYA7;V9GZ61;V9GYC9 DAP3 28S ribosomal protein S29, mitochondrial yes no 0 0 0 7 0 1 55.94 55.998 3 2.3956E-33 16174 20230619_1887_Aki_TMTPro18x_K_F7 194.13 166.98 53287 47024 53177 53356 45115 65094 56337 58933 74387 61726 60924 61207 74932 58485 61538 63892 65757 68557 49296 43097 53928 53533 47950 64759 56718 60690 74197 62256 63745 62066 75363 60743 63056 64379 62895 65056 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 354860000 25309 3623 23752 47519 38289 38289 1 9606 Homo sapiens 0.11251377251778649 SPIEFLENAYEK Unmodified 1438.698 0.6980109 1779 B3KRC6;A0A8I5KWQ7;Q16850;Q05D40;A0A8I5KRT9 CYP51A1 Lanosterol 14-alpha demethylase yes no 0 0 0 5 0.816 1 1 1 63.23 63.263 3 0.0094613 19571 20230619_1886_Aki_TMTPro18x_K_F6 67.519 49.155 83173 68201 81113 82376 60650 79813 88206 81823 94389 94159 92455 106440 90767 93451 109590 129030 115690 128780 76893 62559 82291 82017 65453 80926 87539 83821 95727 94870 95029 107070 93721 98623 111560 129010 110730 122270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75617000 25310 1779 23753 47520;47521;47522 38290 38290 1 9606 Homo sapiens -0.0037901802163560205 SPILVATAVAAR Unmodified 1167.6976 0.69755739 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;O15523;O15523-2;A0A024R9A4;Q5S4N1;B4E132;A0A0J9YVQ7;A0A087WVZ1 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 4 0 1 54.173 54.188 2 1.0549E-05 15885 20230619_1883_Aki_TMTPro18x_K_F4 132.32 111.46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25311 1018 23754 47523 38291 38291 1 9606 Homo sapiens 0.12041651839808765 SPISVAAAAIYMASQASAEK Unmodified 1964.9877 0.98772734 3772 Q00403 GTF2B Transcription initiation factor IIB yes yes 0 0 0 4.5 0.5 1 1 65.942 65.97 3 0.0035381 20521 20230619_1885_Aki_TMTPro18x_K_F5 67.227 42.434 18652 15741 18192 16190 17443 20796 17481 18729 19950 20859 17096 20188 23591 20933 19947 24540 22501 26534 17247 14416 18494 16387 18194 20635 17710 19324 20096 20950 17982 20544 23708 21761 20515 24700 21532 25166 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31956000 25312 3772 23755 47524;47525 38292 38292 1 9606 Homo sapiens 0.043832984724076596 SPISVPGGSALISNLGK Unmodified 1595.8883 0.88827129 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 3.5 0.5 1 1 61.722 61.739 3 1.9759E-18 19042 20230619_1883_Aki_TMTPro18x_K_F4 178.47 146.31 191390 164290 199570 212180 186840 207830 202320 188300 215690 216860 214560 231480 234080 207050 235760 240430 223670 267050 177090 150780 201930 210260 195470 210040 203570 194600 219020 218100 221230 233450 238400 216160 239090 242550 214420 253200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173710000 25313 1331 23756 47526;47527 38293 38293 1 9606 Homo sapiens 0.1141626864061891 SPITIITTK Unmodified 972.58555 0.58554733 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 3 0 1 51.737 51.803 2 1.6359E-06 14943 20230619_1882_Aki_TMTPro18x_K_F3 134.77 72.107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25314 1331 23757 47528 38294 38294 1 9606 Homo sapiens 0.09815797762837519 SPLAGDFITMQCR Unmodified 1494.6959 0.69591919 3368 Q6FI97;Q53FS0;O96019;O96019-2 BAF53A;ACTL6A Actin-like protein 6A yes no 0 0 0 4.5 3.5 1 1 57.668 57.668 2 4.5383E-12 16846 20230619_1888_Aki_TMTPro18x_K_F8 158.05 142.38 57807 51023 60667 63299 57518 75859 67673 68642 79512 69193 65520 58073 74184 61077 67785 73528 69569 61666 53501 46802 61378 63078 60367 75554 68013 70623 79764 69599 68216 59606 75125 63566 69167 73019 66491 58726 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106500000 25315 3368 23758 47529;47530 38295;38296 38296 2 9606 Homo sapiens -0.03164093302734727 SPLAQMEEERR Unmodified 1344.6456 0.64559818 1949 Q8TC62;E7EPK1;A4GYY8;Q3LIE9;Q16181;Q16181-2;E7ES33;B4DUD6;B4DNE4;A8K3D0;A0A024RA87;A0A023T695;G3V1Q4;B4DPQ6;Q59EY4;A0A0U1RRM2;A4D1Y2 SEPT7;DKFZp686F17268;Nbla02942;LOC392884 Septin-7 yes no 0 0 1 3 0.816 1 1 1 39.837 39.894 3 0.00040528 9520 20230619_1883_Aki_TMTPro18x_K_F4 98.407 77.887 61436 39733 55523 55560 71536 78538 66478 70791 94720 68961 85437 93181 81433 75511 78004 72911 99281 83255 56688 36539 57135 55097 72967 77474 68188 72782 94426 70584 87963 92860 83144 78301 80515 73923 94675 79025 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1038299999.9999999 25316 1949 23759 47531;47532;47533 38297;38298 38298 2 9606 Homo sapiens -0.012938796362277571 SPLGEAPPGTPPCR Unmodified 1434.6925 0.69254837 3118 M0QXZ5;I6L9C8;Q96B54 ZNF428 Zinc finger protein 428 yes no 0 0 0 6 0 1 43.287 43.381 2 4.2632E-08 10913 20230619_1886_Aki_TMTPro18x_K_F6 179.19 145.82 20682 13902 13769 21454 24531 27760 23363 23430 30770 21684 25467 23338 26642 22804 25110 25156 28729 30910 19050 12797 14775 21101 24633 27479 23833 24186 30687 22085 26416 23616 27088 23675 25760 25563 27468 29290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24585000 25317 3118 23760 47534 38299 38299 1 9606 Homo sapiens -0.00741020085092714 SPLGEVAIR Unmodified 940.53418 0.53418046 561 O75131;A0A024R994 CPNE3 Copine-3 yes no 0 0 0 7 0 1 47.495 47.583 2 0.015582 12469 20230619_1887_Aki_TMTPro18x_K_F7 75.043 40.871 244450 185550 222850 252950 229000 251050 260160 258660 296450 278380 282280 350320 338570 302440 278690 356340 393130 412400 225770 170460 228450 249840 238270 254150 261640 264330 299430 282480 293190 350610 341160 316380 291180 360100 375170 391030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232630000 25318 561 23761 47535 38300 38300 1 9606 Homo sapiens 0.0615347378881097 SPLLQLPHIEEDNLRR Unmodified 1929.0432 0.043208804 1136 B3KQF0;A0A0S2Z5M1;Q9UGP8;B3KNE7;B3KWU4 SEC63 Translocation protein SEC63 homolog yes no 0 0 1 7 0 1 52.242 52.316 4 8.1738E-11 14681 20230619_1887_Aki_TMTPro18x_K_F7 147.24 120.21 29768 27169 31138 31280 30023 34596 35284 34651 43658 26638 30689 25211 31152 28608 34012 27886 30183 28848 27556 24900 31506 31307 31432 34733 35522 35184 43420 27349 32091 25806 31929 29356 34289 28114 28906 27394 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30253000 25319 1136 23762 47536 38301 38301 1 9606 Homo sapiens 0.11584892775067601 SPLPPGNVK Unmodified 907.51272 0.51271674 4514 Q9H4A4;A6NKB8;Q7RU04 RNPEP Aminopeptidase B yes no 0 0 0 1 0 1 43.638 43.638 2 0.089625 11723 20230619_1880_Aki_TMTPro18x_K_F1 63.673 40.843 29502 21760 29260 28552 35437 33525 30071 31249 37098 30149 40106 42117 39442 28145 40835 32821 42649 42263 27261 19986 29821 28343 36143 33482 30862 32054 37488 30896 40997 41732 40303 29770 41553 33461 40786 40043 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24218000 25320 4514 23763 47537 38302 38302 1 9606 Homo sapiens 0.055260887600866226 SPLQSVVVR Unmodified 983.57638 0.57637963 1525;3803 Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4;A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 no no 0 0 0 2.5 0.5 1 1 46.2 46.279 2 0.0046704 12720 20230619_1881_Aki_TMTPro18x_K_F2 100.84 88.009 333770 274310 297330 342040 351600 417440 378470 365260 444490 364540 338720 360900 358810 307510 398790 410350 403500 380760 308360 251700 306220 340760 362030 415100 381930 376740 444770 368540 353690 364750 367570 324350 405130 409040 385860 362040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 396510000 25321 3803;1525 23764 47538;47539 38303;38304 38303 2 9606 Homo sapiens 0.08393449197183145 SPLSLIAR Unmodified 855.5178 0.51780212 3893 Q96J71;Q14576 ELAVL3 ELAV-like protein;ELAV-like protein 3 yes no 0 0 0 4 0 1 53.545 53.564 2 0.0053022 15650 20230619_1883_Aki_TMTPro18x_K_F4 113.91 62.449 287040 264260 283240 302810 157590 184490 204230 202150 233470 210440 206850 192490 170450 156810 280110 203070 215100 203770 265600 242180 286200 301200 175020 196050 204380 205790 235020 211680 212020 195050 180380 165350 278890 203610 206360 193570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146060000 25322 3893 23765 47540 38305 38305 1 9606 Homo sapiens 0.084263926227095 SPLSWIEEK Unmodified 1087.555 0.55497548 1174 P53004;A0A140VJF4 BLVRA Biliverdin reductase A yes no 0 0 0 7 0 1 61.923 61.961 2 0.0018323 18692 20230619_1887_Aki_TMTPro18x_K_F7 112.11 49.525 122090 107480 121780 142700 122320 145840 139620 136710 146430 148110 152730 155400 173730 159740 161110 183040 189070 217410 112950 98663 123890 141210 127540 146980 140000 140640 149090 149320 157370 157640 176160 165880 165720 185410 180830 206030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85654000 25323 1174 23766 47541 38306 38306 1 9606 Homo sapiens 0.014700193778026005 SPLVAAMQHFLPVLK Unmodified 1649.9327 0.93271906 3354 O95373;E9PLB2 IPO7 Importin-7 yes no 0 0 0 7.5 0.5 1 1 64.548 64.573 3 0.0531 19766 20230619_1888_Aki_TMTPro18x_K_F8 28.351 12.812 20596 14138 15509 20244 17928 20513 19440 17205 22727 22189 24114 23374 27609 20340 24394 25995 23983 30071 18986 13002 16244 19930 18494 20641 19609 17952 23025 22200 24823 23579 27889 21403 24850 26252 22993 28496 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24334000 25324 3354 23767 47542;47543 38307 38307 1 9606 Homo sapiens 0.13375001253075425 SPMVEQAVQTGSADNLNAK Oxidation (M) 1974.9317 0.93166902 4460 Q9BX40;Q5TBQ0;Q5TBQ1;Q5TBP9;B4DQC9;Q9BX40-3 LSM14B Protein LSM14 homolog B yes no 0 1 0 5 0 2 47.392 47.469 3 0.0011113 12637 20230619_1885_Aki_TMTPro18x_K_F5 69.148 57.708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25325 4460 23768 47544;47545 38308;38309 38308 2777 2 9606 Homo sapiens -0.016799544350533324 SPNLDLVETEIK Unmodified 1356.7137 0.71366097 1761 A0A8I5KY07;A0A8I5KRP1;A0A8I5KRK1;A0A8I5KYQ0;A0A8I5KZB3;Q9H2M9;A0A8I5QJC9;A0A8I5KSQ5;A0A8I5KWJ9;A0A8I5QJG4 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 4 0 1 58.734 58.736 2 1.1655E-11 17793 20230619_1883_Aki_TMTPro18x_K_F4 179.6 116.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25326 1761 23769 47546 38310 38310 1 9606 Homo sapiens 0.04957268495422795 SPNLWLK Unmodified 856.48069 0.48068833 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 3.33 0.471 2 1 55.205 55.231 2;3 0.049638 16467 20230619_1882_Aki_TMTPro18x_K_F3 63.054 13.695 200330 198630 202200 225210 221430 297490 261210 262120 313240 183980 181330 141380 175450 143760 212090 192760 197670 181700 185490 181970 205780 226200 230010 294390 262540 268070 310480 189120 191830 145820 181020 150870 214120 192360 189160 172760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 490480000 25327 3758 23770 47547;47548;47549 38311;38312 38311 2 9606 Homo sapiens 0.04670721076956852 SPPADAIPK Unmodified 894.48108 0.48108226 1074 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;P18754-2;C9JW69;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4;M0R1Q8 RCC1 Regulator of chromosome condensation yes no 0 0 0 5.5 0.5 1 1 43.338 43.425 3 0.015821 10995 20230619_1886_Aki_TMTPro18x_K_F6 58.676 19.658 40759 30699 37821 39871 45638 45417 45235 41408 67742 44842 51678 48620 55044 48667 41020 60156 62562 55610 37648 28190 38789 39580 46785 45424 46299 42685 67020 45318 53877 49235 55451 50789 43250 59956 59602 52892 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56413000 25328 1074 23771 47550;47551 38313 38313 1 9606 Homo sapiens 0.029620960061265578 SPPGQVTEAVK Unmodified 1111.5873 0.58733824 435 A0A024R7A8;P15121;Q59EL5;E9PCX2;E9PEF9 AKR1B1 Aldose reductase yes no 0 0 0 6 0.816 1 1 1 42.425 42.509 3 0.00087029 10504 20230619_1885_Aki_TMTPro18x_K_F5 92.112 53.094 57947 40318 50361 48549 55189 67807 60560 58883 66917 58946 71620 70786 68478 58648 68836 63543 81935 74013 53474 37006 51863 48613 57163 66880 60948 60766 67955 59947 73128 70918 70020 61163 70678 64384 78213 70216 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1216900000 25329 435 23772 47552;47553;47554 38314 38314 1 9606 Homo sapiens 0.03600806780787025 SPPHCELMAGHLR Oxidation (M) 1519.7024 0.70240155 3142 J3QK89;Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes no 0 1 0 6 0 1 32.186 32.222 4 3.3631E-05 6571 20230619_1886_Aki_TMTPro18x_K_F6 118.76 105.33 16260 11009 14881 17245 20824 18977 18644 23442 20986 18225 18801 19663 19243 15377 19841 15366 19537 20243 15008 10136 15330 16921 21075 19160 19006 23482 21160 18734 19423 19743 19647 16015 20123 15730 18700 19172 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21618000 25330 3142 23773 47555 38315 38315 1826 1 9606 Homo sapiens -0.0366615535137953 SPPLHEHPLYK Unmodified 1316.6877 0.68772099 4474 S4R369;Q9BZE1 MRPL37 39S ribosomal protein L37, mitochondrial yes no 0 0 0 7.5 0.5 1 1 38.117 38.142 4 0.0004036 8487 20230619_1887_Aki_TMTPro18x_K_F7 105.17 75.697 105340 85840 98814 115190 137170 144510 125920 127710 142620 103810 104700 103150 114710 92108 104180 106400 119630 103720 97356 78827 101590 114250 139120 143500 128090 130980 142780 106260 109640 104410 116250 96158 106980 106550 114200 98601 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 131680000 25331 4474 23774 47556;47557 38316;38317 38316 2 9606 Homo sapiens 0.042044638344577834 SPPLIGSESAYESFLSADDK Unmodified 2111.9899 0.98989541 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 4.5 1.12 1 1 1 1 62.75 62.783 3 3.58E-11 19378 20230619_1886_Aki_TMTPro18x_K_F6 123.63 113.98 65282 60660 64088 70111 52330 71064 61269 63612 52351 62957 101780 115120 71834 82769 119380 73081 99939 144530 60406 55594 65071 70046 55603 71597 61069 65533 55744 65197 100980 113350 76628 85910 119250 77724 96117 136360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1046399999.9999999 25332 630 23775 47558;47559;47560;47561 38318 38318 1 9606 Homo sapiens -0.02161994308789872 SPPPESMDTPTSTR Oxidation (M) 1517.6668 0.66678713 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 1 0 2 0 1 32.71 32.77 3 0.0004564 6793 20230619_1881_Aki_TMTPro18x_K_F2 87.863 79.479 8191.9 5250.8 8374.8 9725.1 9957.5 12885 12124 12266 13351 10579 12837 12478 16716 10788 10937 13064 16258 14943 7566 4846.8 8529.6 9485.4 10289 12761 12133 12526 13501 10844 13356 12533 16644 11323 11527 13190 15495 14178 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13097000 25333 3588 23776 47562 38319 38319 2258 1 9606 Homo sapiens -0.07133959118027633 SPPPGMGLNQNR Unmodified 1266.6139 0.61390412 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q86VG2;P23246-2;Q6PIX2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 1 0 1 39.872 39.872 2 5.6855E-05 9968 20230619_1880_Aki_TMTPro18x_K_F1 128.58 79.043 79146 65373 70715 69321 84690 98474 87823 87462 109310 84716 83124 74418 90205 69065 79678 100910 100490 88694 73124 59891 72750 70097 87038 97117 89002 89999 109050 85515 86762 75919 91327 73133 82469 100140 95867 84415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 270070000 25334 1450 23777 47563 38320 38320 1 9606 Homo sapiens -0.008738275995256117 SPPSPVER Unmodified 867.44503 0.4450311 3790 Q02952-3;Q02952-2;Q02952 AKAP12 A-kinase anchor protein 12 yes no 0 0 0 3.5 0.5 1 1 33.152 33.217 2 0.03816 6794 20230619_1883_Aki_TMTPro18x_K_F4 72.789 31.601 44431 29021 49651 44418 48216 48966 43452 50051 55124 54693 75035 101940 64142 69755 87455 32972 93373 100680 41072 26715 49935 43653 50040 49188 44510 51188 56260 56433 75800 100040 67015 71072 88536 37695 89332 94878 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 25730000 25335 3790 23778 47564;47565 38321;38322 38322 2 9606 Homo sapiens 0.006006388292917109 SPPSSSEIFTPAHEENVR Unmodified 1982.9334 0.93338358 535 I3L2L5;A0A024R8R5;I3L317;I3L4Q0;C9JLW8;I3L3A7 FAM195B;hCG_1818442 Protein FAM195B yes no 0 0 0 4 0 1 42.912 42.955 3 0.00015967 10815 20230619_1883_Aki_TMTPro18x_K_F4 84.085 59.797 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25336 535 23779 47566 38323 38323 1 9606 Homo sapiens -0.018765773548011566 SPPSTGSTYGSSQK Unmodified 1382.6314 0.6313879 1525;3803 Q7Z5U1;Q05D20;Q6P0P7;Q6PJV4;A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 no no 0 0 0 7.5 0.5 1 1 37.2 37.225 3 0.00019331 8160 20230619_1887_Aki_TMTPro18x_K_F7 94.688 81.487 37057 36607 51054 46666 54101 70119 54332 61427 60595 59040 68726 68672 58964 53719 55965 46867 72064 60247 34418 33575 50734 46610 56007 68884 55001 63247 61685 60082 69698 68731 60379 55541 57792 47998 68713 57124 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 28077000 25337 3803;1525 23780 47567;47568 38324;38325;38326 38324 3 9606 Homo sapiens -0.044622535835287636 SPPYTAFLGNLPYDVTEESIK Unmodified 2340.1525 0.15254406 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;F8VX11;F8VP89;F8VSC7;F8W0K0;F8VYE9;F8VRU1 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 0 7 0 1 64.499 64.529 3 1.5269E-11 19859 20230619_1887_Aki_TMTPro18x_K_F7 128.72 116.52 142100 137830 134870 166050 115470 125580 129040 131900 121540 172780 169870 188300 199720 184230 164540 215960 177920 159210 131490 126350 137480 164830 121800 130260 129220 135500 126430 172800 173440 190300 201290 191660 168960 213230 169980 151890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 305880000 25338 2578 23781 47569 38327;38328 38327 2 9606 Homo sapiens 0.03607389093167512 SPQDLASTSR Unmodified 1060.5149 0.51490158 4549 Q9HC52;C9J6K3;C9JM54 CBX8 Chromobox protein homolog 8 yes no 0 0 0 5 0 1 36.092 36.184 2 0.042566 7963 20230619_1885_Aki_TMTPro18x_K_F5 75.197 60.683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25339 4549 23782 47570 38329 38329 1 9606 Homo sapiens -0.012935272927734331 SPQELLCGASLISDR Unmodified 1644.8141 0.81412007 2771 CON__P00735;B4DDT3;E9PIT3;P00734;Q69EZ8 F2 Prothrombin;Activation peptide fragment 1;Activation peptide fragment 2;Thrombin light chain;Thrombin heavy chain yes no 0 0 0 6.33 0.471 2 1 60.885 60.935 2;3 1.0437E-19 18532 20230619_1886_Aki_TMTPro18x_K_F6 191.19 171.63 + 80985 78462 87993 94089 94182 121400 96933 94040 129630 158450 209530 288350 173350 179880 186540 186880 183970 265510 75024 71925 88957 94072 97586 120040 98647 99751 133390 160530 210170 282770 178860 189340 189360 192090 176610 251050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 525150000 25340 2771 23783 47571;47572;47573 38330;38331;38332 38331 3 9606 Homo sapiens 0.017505574867755058 SPQILVPTLFNLLSR Unmodified 1696.9876 0.98759141 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;B4E263;A2VDI1;B3KWS1 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 8 0 1 66.49 66.509 3 1.7125E-05 20543 20230619_1888_Aki_TMTPro18x_K_F8 107.5 73.61 7216.1 5738.6 4863.5 4934.8 7907.8 5348.1 5872.9 7187.4 6551.2 8153.3 6339.3 5257.8 7527.3 4282.9 7655.2 5827 6994.7 6303.9 6653.3 5249.6 5177 5063.9 7898.7 5433.2 6063.4 7232.6 6643.7 8093 6561 5434.6 7635 4546.1 7734.7 5862.8 6694 5984.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49824000 25341 2332 23784 47574 38333 38333 1 9606 Homo sapiens 0.16697711325377895 SPQLLNQPVSWCK Unmodified 1555.7817 0.78169773 1981 P09884;A6NMQ1;A0A7I2V2V3 POLA1 DNA polymerase alpha catalytic subunit;DNA polymerase yes no 0 0 0 3 0 1 56.966 56.999 3 7.7659E-05 17212 20230619_1882_Aki_TMTPro18x_K_F3 106.13 93.122 35367 33162 40085 39877 33740 32003 34373 37333 43415 39196 38966 34029 40865 37146 35757 44137 34999 40120 32769 30403 40217 39635 35525 33105 34931 37825 43539 39366 40234 34918 41418 38574 36458 43994 33529 38130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52207000 25342 1981 23785 47575 38334 38334 1 9606 Homo sapiens 0.02603814874441923 SPQNQYPAELMR Unmodified 1432.6769 0.67689831 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-2;A0A0S2Z441;C9J8M6 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 6 0 1 46.108 46.194 2 2.1328E-06 12181 20230619_1886_Aki_TMTPro18x_K_F6 147.62 104.11 73569 59892 60686 64401 48355 70362 67205 64067 71953 85689 85150 80801 90473 74227 73623 93925 83516 81158 67926 54880 62577 64770 51873 70537 66834 66470 73613 85277 86931 82046 91345 77824 75820 93302 79796 77228 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129090000 25343 1091 23786 47576 38335 38335 1 9606 Homo sapiens -0.022133066021524428 SPQPESFK Unmodified 918.4447 0.44469675 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 0 5 0 1 42.375 42.458 3 0.090466 10554 20230619_1885_Aki_TMTPro18x_K_F5 40.352 21.254 35607 31981 35462 36867 45458 45127 41266 36351 47955 37480 41793 36555 42819 38714 34788 41968 46179 37481 32944 29312 36188 36939 46281 44826 42042 37788 48206 37832 43170 37256 43317 40019 36180 41857 44014 35679 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8194100 25344 3588 23787 47577 38336 38336 1 9606 Homo sapiens -0.01778780890560938 SPQSNSPVLLSR Unmodified 1283.6834 0.68336389 2544 D6RAI0;D6RGK7;D6RAZ3;D6R9T3;E7EMP6;B4DMK2;Q96FZ2 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein yes no 0 0 0 1 0 1 42.356 42.356 2 7.8206E-06 11128 20230619_1880_Aki_TMTPro18x_K_F1 150.09 103.01 44963 36911 38874 45553 42648 55636 53907 47052 61812 45891 53886 52322 52031 46169 56975 51376 56814 51699 41531 33865 40113 45412 44389 55272 53909 48654 62134 46681 55587 52632 53413 48089 57806 51588 54325 49119 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62534000 25345 2544 23788 47578 38337 38337 1 9606 Homo sapiens 0.05286954620896722 SPQVPAAQQMLNFPEK Unmodified 1783.8927 0.89270474 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 0 1 0 1 59.029 59.029 3 0.00024088 18076 20230619_1880_Aki_TMTPro18x_K_F1 88.319 68.579 71855 60538 61827 69242 64409 78455 70633 71308 79161 84730 84548 84588 93375 75443 89607 100660 93821 98720 66378 55496 63732 69337 66955 78468 71136 73697 80426 84903 86893 85597 94814 79478 91480 100600 89761 93768 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151060000 25346 4016 23789 47579 38338 38338 1 9606 Homo sapiens 0.032114097918565676 SPRPTSAPAITQGQVAEGGVLDASAK Unmodified 2507.298 0.29797952 3431 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;P11171-5;Q4VB87;A0A994J847;Q29RX4;A0A2R8YCW8;A0A3B3ITP0;P11171-7;A0A2R8Y5Z6;A0A2R8Y7Y3;A0A2R8Y5G2;P11171-6;A0A2R8Y570;A0A2R8Y420;A0A3B3IU06;A0A2R8YFR9;A0A2R8Y6G5;A0A3B3IUD6;A0A2R8Y7N0;A0A2R8Y6D0;A0A1B0GWG0;A0A2R8Y4N6;A0A2R8Y5C8 EPB41 Protein 4.1 yes no 0 0 1 8 0 1 48.268 48.334 3 8.8005E-14 12808 20230619_1888_Aki_TMTPro18x_K_F8 123.44 101.43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25347 3431 23790 47580 38339 38339 1 9606 Homo sapiens 0.10462244942073085 SPSDEYK Unmodified 824.35521 0.35521304 620 Q9UKD2;A0A024RAE1;B4DHZ2 MRTO4;C1orf33 mRNA turnover protein 4 homolog yes no 0 0 0 3 0 1 37.388 37.441 2 0.024666 8548 20230619_1882_Aki_TMTPro18x_K_F3 89.142 52.947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25348 620 23791 47581 38340 38340 1 9606 Homo sapiens -0.06399035569950229 SPSDSGYSYETIGK Unmodified 1489.6573 0.6572683 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 5 0.816 1 1 1 48.389 48.454 3 4.9488E-09 13069 20230619_1885_Aki_TMTPro18x_K_F5 162.32 141.86 462720 350090 377760 497090 450010 496170 473860 451360 479780 555340 760120 829130 659410 669370 675580 720980 813000 884220 427010 321780 392620 489560 462480 500680 476740 467350 499500 563810 762820 823770 677710 697980 694560 732720 777040 837850 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1035299999.9999999 25349 630 23792 47582;47583;47584 38341;38342;38343 38343 3 9606 Homo sapiens -0.06797404131930307 SPSDSSTASTPVAEQIER Unmodified 1860.8701 0.87011462 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;B3KSQ7;B7Z2Z0;D6R9Q9 DBN1 Drebrin yes no 0 0 0 2.2 0.748 1 2 2 42.061 42.118 2;3 2.0303E-18 10522 20230619_1882_Aki_TMTPro18x_K_F3 230.69 199.27 59726 46561 67266 55137 68756 75448 69380 66753 67517 77516 93173 92547 83499 71929 88144 77773 100060 99650 55268 42709 67652 55276 71273 74559 69904 69075 69932 78191 93981 92554 85751 75208 90146 79319 95615 94417 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1099000000 25350 1396 23793 47585;47586;47587;47588;47589 38344;38345 38345 2 9606 Homo sapiens -0.025885628626838297 SPSDTEGLVK Unmodified 1031.5135 0.5135046 2072 Q9UEL4;Q5U0H8;A8K5D4;O95297-4;O95297-2;O95297 MPZL1 Myelin protein zero-like protein 1 yes no 0 0 0 4 0 1 44.377 44.421 2 0.012939 11462 20230619_1883_Aki_TMTPro18x_K_F4 95.775 63.554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25351 2072 23794 47590 38346 38346 1 9606 Homo sapiens -0.0009916138151311316 SPSEEPPEEEIPKEDGILVLSR Unmodified 2449.2224 0.22241454 1950 A4L733;Q13087-2;Q13087;Q4TT66;H0Y4J5 PDIA2 Protein disulfide-isomerase A2 yes no 0 0 1 2.5 0.5 1 1 56.824 56.851 3 1.9603E-12 17315 20230619_1881_Aki_TMTPro18x_K_F2 138.82 130.22 13094 13290 16123 15111 15014 16699 15592 16963 18622 19762 18971 23642 20231 17428 21136 20205 18443 16554 12149 12174 16103 15140 15694 16775 15793 17382 18827 19932 19540 23590 20648 18317 21322 20064 17659 15769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42178000 25352 1950 23795 47591;47592 38347 38347 1 9606 Homo sapiens 0.05577222971123774 SPSEESAPTTSPESVSGSVPSSGSSGR Unmodified 2549.1365 0.13651266 450 A8K1J3;A0A024R7G8;P54725-3;P54725;A0A494C0B4;P54725-2 RAD23A UV excision repair protein RAD23 homolog A yes no 0 0 0 3 0 1 41.101 41.16 3 5.3085E-05 10089 20230619_1882_Aki_TMTPro18x_K_F3 83.362 83.23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25353 450 23796 47593 38348 38348 1 9606 Homo sapiens -0.07609013672390574 SPSKPLPEVTDEYK Unmodified 1588.7985 0.79845323 2662 B5BUB5;P05455;E7ERC4;E9PGX9;E9PFL9;Q9UMH7 SSB Lupus La protein yes no 0 0 1 6 0.816 1 1 1 48.199 48.28 3 1.0403E-06 12979 20230619_1885_Aki_TMTPro18x_K_F5 130.06 91.691 118720 84112 92819 117290 110060 145370 126150 129790 159750 150810 152780 175030 179980 150280 108940 168770 170270 141310 109490 77317 96893 116010 113690 144400 127270 134210 160580 152060 158310 175660 179480 156750 115730 167620 162120 134610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 609980000 25354 2662 23797 47594;47595;47596 38349;38350 38349 2 9606 Homo sapiens 0.027605942413629236 SPSLSPSPPSPLEK Unmodified 1421.7402 0.74021007 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 7.5 0.5 1 1 51.072 51.149 3 0.0006477 14093 20230619_1887_Aki_TMTPro18x_K_F7 86.944 42.645 180160 146960 167050 161940 181320 213430 189900 198220 210740 208430 244290 232290 237130 202970 235600 223440 243460 245680 166490 134690 170990 163060 187580 211570 191690 203750 214810 210830 248690 233800 242150 211440 239960 225510 232880 233100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 269240000 25355 630 23798 47597;47598 38351;38352 38351 2 9606 Homo sapiens 0.04620957386759983 SPSLSQSQASR Unmodified 1146.5629 0.56291441 1600 Q6DHZ8;B2RBM8;A0A669KBJ7;Q9H2P0;A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein yes no 0 0 0 6 0.816 1 1 1 32.126 32.196 2 7.7412E-06 6176 20230619_1887_Aki_TMTPro18x_K_F7 152.54 110.35 30310 14298 38763 37377 49691 58474 38577 52351 43212 26961 47087 52198 38980 38571 48115 17605 48690 46565 28017 13301 38829 36080 50463 57315 39737 53181 43837 29386 47829 51344 40505 39128 48623 19756 46566 43929 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27904000 25356 1600 23799 47599;47600;47601 38353;38354 38354 2 9606 Homo sapiens -0.004504533727185844 SPSTLLPK Unmodified 841.49092 0.49091866 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;A0A024R2V0;P27816-4;Q86Y04;P27816-5;B5MEG9;H7C4C5;H0Y2V1;F8W9U4 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 0 2 0 1 48.621 48.686 3 0.083638 13887 20230619_1881_Aki_TMTPro18x_K_F2 42.109 17.954 26817 20882 26329 28135 24029 25418 28640 27004 30902 34315 33440 37427 41100 36017 36417 42794 44209 45461 24786 19180 26762 27781 25255 25948 28686 27686 31481 34379 34557 37802 41497 37557 37578 43025 42232 43147 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28627000 25357 2902 23800 47602 38355 38355 1 9606 Homo sapiens 0.06383284011519663 SPSWYGIPR Unmodified 1061.5294 0.52942943 2144;1327 A0A1W6S962;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9;A0A494C0Q7 GTF2I General transcription factor II-I no no 0 0 0 3 0 1 50.882 50.953 2 0.011491 14625 20230619_1882_Aki_TMTPro18x_K_F3 82.452 56.01 133080 147910 152010 145970 141970 172110 154680 135310 202500 157580 165470 124370 157050 134100 144460 168190 177020 141590 123480 135300 152680 148000 148750 171270 156670 141420 201960 157240 170850 128280 160010 139810 149030 166920 168810 134900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276140000 25358 1327;2144 23801 47603 38356 38356 1 9606 Homo sapiens 0.0011258964602802735 SPTAPSVFSPTGNR Unmodified 1416.6997 0.69974224 991 B3KTK5;Q53GS8;H0Y3X6;B3KM78;A0A0C4DFX9;Q9H3P2;B3KSP0;C9JEM7;H7C2C7;C9JHL4 NELFA;WHSC2 Negative elongation factor A yes no 0 0 0 2 0 1 45.563 45.645 2 2.7661E-11 12406 20230619_1881_Aki_TMTPro18x_K_F2 222.34 146.17 54712 44317 48938 53967 53302 62920 60635 59400 71095 66043 71585 69019 69418 60425 68288 70516 78713 73737 50543 40656 50300 53824 55273 62856 61029 61102 71835 66493 73316 69652 70884 63146 70044 70878 75177 70020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67497000 25359 991 23802 47604 38357 38357 1 9606 Homo sapiens 0.008060357870135704 SPTLYGISHDDLK Unmodified 1444.7198 0.71980898 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 6 0 1 49.528 49.605 3 2.8889E-05 13743 20230619_1886_Aki_TMTPro18x_K_F6 116.51 84.871 130180 118980 134570 144710 119770 156880 136250 143530 145370 157220 146140 170980 164380 137420 124680 144560 153030 179830 120500 109100 136200 144190 126200 157360 136790 147930 147730 158530 150830 171650 165300 143310 129160 147080 146330 170330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142070000 25360 3312 23803 47605 38358 38358 1 9606 Homo sapiens 0.015237867269433991 SPTPPLFSLPEAR Unmodified 1410.7507 0.75071518 4349 Q96FV9;Q96FV9-2;J3KT14;J3KRD7;J3QQZ3 THOC1 THO complex subunit 1 yes no 0 0 0 1 0 1 59.209 59.209 3 0.021067 18181 20230619_1880_Aki_TMTPro18x_K_F1 57.804 30.062 14619 10439 13767 16292 14034 18531 13674 10783 17482 11915 13611 16758 17646 15318 15714 18047 13223 21463 13500 9608.4 14076 15982 14580 18378 13920 11603 17426 12152 14346 16743 17789 15994 15892 18274 12732 20319 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60666000 25361 4349 23804 47606 38359 38359 1 9606 Homo sapiens 0.061769848318363074 SPTTAGFSQR Unmodified 1050.5094 0.50942227 856 A0A669KB35;Q9UPT6;A0A087WYG2;B7ZMF3;E9PFH7 MAPK8IP3 C-Jun-amino-terminal kinase-interacting protein 3 yes no 0 0 0 7.5 0.5 1 1 35.932 35.961 2 4.8646E-07 7851 20230619_1888_Aki_TMTPro18x_K_F8 187.22 138.65 53700 44374 53467 64194 46779 50202 47553 50976 54190 46563 65013 67957 55185 52880 64485 49365 73614 70192 49656 40781 54283 62987 49136 51835 48158 51953 55202 47945 65804 67492 57122 54847 65825 50882 70321 66461 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56457000 25362 856 23805 47607;47608 38360 38360 1 9606 Homo sapiens -0.01381206084556652 SPTVPSQNPSR Unmodified 1168.5836 0.58364985 1783 A0A8I5KXR3;Q03164-2;Q03164;Q03164-3;A0A3B3ITT7;A0A8I5KQV5;A0A8I5KY70;A0A8I5KQ03;B4E012 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 0 0 0 7 0 1 32.886 32.973 2 0.0048037 6516 20230619_1887_Aki_TMTPro18x_K_F7 98.048 71.939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25363 1783 23806 47609 38361 38361 1 9606 Homo sapiens 0.006101370069472978 SPTWFGIPR Unmodified 1059.5502 0.55016488 2144 X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9 GTF2I General transcription factor II-I yes no 0 0 0 4.5 0.5 1 1 57.472 57.503 2 0.012897 16826 20230619_1885_Aki_TMTPro18x_K_F5 79.906 45.72 325710 288640 328960 323810 285030 363620 344510 337530 396030 239750 239470 207360 238260 206340 294880 253840 252140 204720 301350 264510 333260 324780 301550 364000 345490 344050 393770 246880 252970 212220 245970 215330 296260 251750 241330 195140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 266000000 25364 2144 23807 47610;47611 38362;38363 38363 2 9606 Homo sapiens 0.022771800256805363 SPVAVQSTK Unmodified 915.50255 0.50254598 1433 M0R248;A0A384MR44;Q13011 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes no 0 0 0 8 0 1 39.7 39.689 2 0.0027694 9348 20230619_1888_Aki_TMTPro18x_K_F8 112.75 65.681 14100 8935.1 17006 17048 23690 27272 17284 27719 24748 8912.5 18645 19455 13083 14669 21026 8839.9 20842 18383 13042 8251.7 17133 16673 23923 26784 18053 27748 24478 10353 19191 19117 13934 14971 21160 9552.7 19926 17368 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15867000 25365 1433 23808 47612 38364 38364 1 9606 Homo sapiens 0.041414810348555875 SPVEDVCTAK Unmodified 1104.5121 0.51212439 2788 CON__P41361 yes yes 0 0 0 3.67 0.471 1 2 43.749 43.801 2;3 9.2164E-06 11186 20230619_1883_Aki_TMTPro18x_K_F4 166.07 96.241 + 71452 54278 70990 84309 119170 133430 100780 96149 184530 157370 272450 508480 192400 239860 224070 180460 316300 433820 66037 49942 72971 83218 119660 130300 105240 102620 186400 166320 273480 490000 201000 252840 232170 196610 302560 408930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171340000 25366 2788 23809 47613;47614;47615 38365;38366 38366 2 -0.035951187419414055 SPVEDVCTAKPR Unmodified 1357.666 0.66599927 2788 CON__P41361 yes yes 0 0 1 6 0 1 40.394 40.486 3 7.3285E-07 9684 20230619_1886_Aki_TMTPro18x_K_F6 149.93 131.57 + 24794 26277 28253 37057 70030 70907 51672 45165 73357 77581 169430 128720 62992 54391 240590 29198 36622 30643 22995 24123 29098 36925 68919 68549 53843 48797 77083 78183 164650 125820 75803 57152 229110 30557 36970 29112 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72393000 25367 2788 23810 47616 38367 38367 1 0.0014729102356341173 SPVEFVEYNK Unmodified 1210.587 0.58700389 804 Q9NQ66;A0A0D9SF51;Q9NQ66-2;A0A087WT80;A0A087WW73;A0A1B0GWB6;A0A0D9SG17;B3KXN8;B4DRC6;H0YCJ2 PLCB1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1;Phosphoinositide phospholipase C yes no 0 0 0 5 0 1 55.485 55.549 2 0.064011 16061 20230619_1885_Aki_TMTPro18x_K_F5 58.981 29.633 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25368 804 23811 47617 38368 38368 1 9606 Homo sapiens -0.009866129390502465 SPVESTTEPPAVR Unmodified 1368.6885 0.68850885 49 G5EA31;A0A024QZM6;P53992;B4DSN3;B7ZAY6;P53992-2 SEC24C Protein transport protein Sec24C yes no 0 0 0 3 0 2 39.588 39.643 2;3 8.292E-09 9472 20230619_1882_Aki_TMTPro18x_K_F3 131.69 90.611 29633 23542 27552 29383 40852 38852 37429 35966 47230 37447 45711 41216 44005 34494 41569 41201 44975 42754 27379 21605 28368 29316 41258 38517 38224 36977 47464 37902 46863 41466 44832 36172 42498 41386 42984 40600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 140760000 25369 49 23812 47618;47619 38369;38370 38369 2 9606 Homo sapiens 0.01891213692852034 SPVFSSSDGSLWETVAR Unmodified 1823.869 0.86899241 4129 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 yes yes 0 0 0 7 0 1 61.556 61.595 3 4.384800000000001E-25 18502 20230619_1887_Aki_TMTPro18x_K_F7 164.8 146.02 44634 35841 46847 44985 42183 48946 50311 44483 53908 48381 49634 49657 45213 38565 41157 53202 46619 50727 41284 32891 47328 44737 44411 49087 50366 45879 54526 48735 50931 49985 46100 40916 42294 53052 44580 48192 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30064000 25370 4129 23813 47620 38371 38371 1 9606 Homo sapiens -0.009987324409394205 SPVPSAFSDQSR Unmodified 1276.6048 0.60477922 1230 Q9UQ35;A0A140VK53;O60382;Q9UQ35-2;I3L3Q8 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 5.5 0.5 1 1 44.192 44.278 2 5.3079E-05 11361 20230619_1886_Aki_TMTPro18x_K_F6 158.08 134.11 81182 57660 63313 91435 87810 108110 92511 92415 120510 90532 104860 119640 106190 117270 131460 120690 116900 126990 74868 53083 66365 89674 89575 107610 93817 95468 120450 92579 108550 120060 109720 121080 132370 121640 112060 120510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 236230000 25371 1230 23814 47621;47622 38372;38373 38373 2 9606 Homo sapiens -0.022458976842017364 SPVPVETLK Unmodified 968.55425 0.5542472 1030 A0A0F7NGI8;Q32MZ4-3;Q32MZ4-2;Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes no 0 0 0 7 0 1 49.555 49.64 2 0.00073765 13416 20230619_1887_Aki_TMTPro18x_K_F7 125.16 71.003 72927 48721 66147 65493 80812 86076 74942 74943 83920 97422 94943 97036 110340 84120 86562 116360 113950 100440 67305 44778 67967 65022 82622 85222 76199 77907 85535 97225 97559 98108 110950 88924 90110 115440 108670 95620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50852000 25372 1030 23815 47623 38374 38374 1 9606 Homo sapiens 0.06871224728763536 SPVSQLDCLNR Unmodified 1287.6241 0.62413446 1886 Q04727-3;Q04727;Q04727-4;Q04727-2;A0A994J7T6;B3KQ29;Q04724;B4DEF9;Q59EF7 TLE4;TLE1 Transducin-like enhancer protein 4;Transducin-like enhancer protein 1 yes no 0 0 0 6.5 0.5 1 1 47.301 47.385 2 5.8567E-09 12364 20230619_1887_Aki_TMTPro18x_K_F7 187.97 161.59 76107 70450 79201 66806 52282 64831 62054 60536 66766 85666 87202 76057 99494 76353 74103 112250 104110 84830 70455 64458 79710 67828 56748 65655 62231 62824 68653 84919 88941 77756 99913 80653 77660 110570 99191 80933 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137230000 25373 1886 23816 47624;47625 38375 38375 1 9606 Homo sapiens -0.008172646649427406 SPVTFLSDLR Unmodified 1133.6081 0.60807369 1957 A5YKK6;A5YKK6-2;B4DYL7;B3KPW6;B7Z6X2;B3KS60 CNOT1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 1 0 1 61.539 61.539 2 0.028573 19092 20230619_1880_Aki_TMTPro18x_K_F1 69.812 47.664 65766 55517 66486 73342 65908 86801 79737 76538 81452 68467 60034 56437 62168 48603 75089 68122 66369 59161 60830 50966 67538 72755 68968 86463 79633 78688 82013 69286 62720 57601 63971 51445 75605 67667 63536 56313 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26927000 25374 1957 23817 47626 38376 38376 1 9606 Homo sapiens 0.04661397160452907 SPVTTLLECMHK Unmodified 1414.6949 0.69485656 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;A0A3B3ISX1;A0A3B3ITG9;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 2 0 1 59.043 59.056 3 1.523E-10 18212 20230619_1881_Aki_TMTPro18x_K_F2 191.23 158.04 292100 259490 270970 289110 223960 303840 281740 296460 323850 333010 293480 302130 346270 278290 283180 373160 339420 361200 270080 237770 276480 289820 238440 305900 282130 304310 326530 333640 304870 307350 348690 292970 292670 372510 324360 343120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107900000 25375 1718;4020 23818 47627 38377;38378 38377 2 9606 Homo sapiens 0.004096923283441356 SPVVGFDPHHHMR Oxidation (M) 1530.715 0.71501515 1886 Q04727-3;Q04727;Q04727-4;Q04727-2;A0A994J7T6;B3KQ29;H7C4E4;H7C4W5;H0Y5S0 TLE4 Transducin-like enhancer protein 4 yes no 0 1 0 6.5 0.5 1 1 31.479 31.544 4 0.04155 5928 20230619_1887_Aki_TMTPro18x_K_F7 56.569 47.036 7736.5 7080.3 15180 10702 8410.8 9909.7 8105.6 12514 14915 9987 15495 11801 12995 12625 12900 11922 13520 13041 7216 6508.1 14669 10510 9263.7 10134 8429.7 12526 14803 10293 15732 11946 13347 12953 13148 12060 12927 12376 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14588000 25376 1886 23819 47628;47629 38379 38379 1211 1 9606 Homo sapiens -0.029113758968378534 SPVVLQSILSLMDR Unmodified 1556.8596 0.8596137 308 B0QY29;A0A024R4V3;Q9NWS6 FAM118A;C22orf8 Protein FAM118A yes no 0 0 0 5 0 1 66.32 66.363 3 0.01408 20716 20230619_1885_Aki_TMTPro18x_K_F5 62.377 16.405 8072.5 5908.8 7481.2 7933.3 7984.1 7363.1 8822.7 8484.1 9727.1 9329.2 7144.3 8832 10350 8745.7 8922.4 9159.7 10240 11133 7455 5428.4 7657.7 7838.7 8265.6 7517.8 8873 8613.9 9764.4 9368.6 7605.1 8977.2 10396 9051.4 9171.6 9308 9791.4 10550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8753300 25377 308 23820 47630 38380 38380 1 9606 Homo sapiens 0.10345827739820379 SPVVSGDTSPR Unmodified 1100.5462 0.54620171 597 P10636-3;A0A024RA19;A0A0G2JMX7;A0A0G2JS76;A0A024R9Y1;A0A0G2JPD5;A0A0G2JQJ7;A0A7I2PLE3;A0A024RA17;A0A7P0T936;A0A024R9Y0;I3L170;B3KTM0;A0A7I2PJZ2;P10636-5;P10636-7;P10636-6;P10636-8;P10636-4;P10636-2;P10636;P10636-9;B4DSB3;B4DSE3 MAPT Microtubule-associated protein tau;Microtubule-associated protein yes no 0 0 0 4 0 1 34.745 34.795 2 0.004065 7476 20230619_1883_Aki_TMTPro18x_K_F4 103.7 67.82 11690 6693.2 11243 17495 12389 12699 11652 13865 15063 13656 19829 20096 17223 17189 20019 11145 26547 24364 10786 6219.7 11510 16687 12758 13215 11909 14088 15327 14008 20012 19997 17815 17514 20615 12065 25321 23009 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13869000 25378 597 23821 47631 38381 38381 1 9606 Homo sapiens -4.9542586793904775E-05 SPWSNKYDPPLEDGAMPSAR Oxidation (M) 2233.011 0.010981977 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;B1AK85;A0A6I8PRV6 CAPZB F-actin-capping protein subunit beta yes no 0 1 1 6 0 1 50.169 50.246 3 0.064445 13940 20230619_1886_Aki_TMTPro18x_K_F6 44.054 36.52 94216 84914 89843 95917 95969 82683 101620 91902 84726 114930 132170 96384 102180 76337 121240 83934 82999 70615 87141 77814 91729 95831 99112 84929 101660 93907 89236 114260 131870 98059 105980 79852 120630 83624 79697 67257 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 120340000 25379 1434 23822 47632 38382;38383 38382 921 2 9606 Homo sapiens -0.05620307480921838 SPWSNKYDPPLEDGAMPSAR Unmodified 2217.0161 0.016067355 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;B1AK85;A0A6I8PRV6 CAPZB F-actin-capping protein subunit beta yes no 0 0 1 7 0 1 53.27 53.341 3 1.2547E-07 15031 20230619_1887_Aki_TMTPro18x_K_F7 102.79 98.841 51337 44772 54193 40665 32200 49066 48769 48866 44005 63869 60626 49985 58649 46452 62930 44309 45739 33194 47511 40959 54416 41589 35709 48975 48120 50311 45834 63279 61283 51235 60060 47931 62859 44020 43843 31692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 478230000 25380 1434 23822 47633 38384 38384 1 9606 Homo sapiens -0.04376003618335744 SPYGGGRPGR Unmodified 1002.4995 0.49952629 299 A0A024R4M0;P46781 RPS9 40S ribosomal protein S9 yes no 0 0 1 3.29 1.67 1 2 1 1 1 1 25.419 25.487 3 0.00072965 3847 20230619_1881_Aki_TMTPro18x_K_F2 100.02 80.23 2910800 1864400 3199800 3209900 3823400 3847500 3699100 3755800 4243600 3686300 4137800 4017600 4424400 3681500 3549100 2643100 4821600 4261600 2690100 1719200 3235500 3137800 3915300 3838800 3754100 3840800 4287000 3740400 4261200 4049400 4465200 3757000 3688800 2766900 4597100 4032500 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 4193999999.9999995 25381 299 23823 47634;47635;47636;47637;47638;47639;47640 38385;38386;38387;38388;38389;38390 38386 6 9606 Homo sapiens -0.0016234929928486963 SPYLFSCGEDK Unmodified 1301.5598 0.55980286 3260 O43660-2;O43660;H0YA24 PLRG1 Pleiotropic regulator 1 yes no 0 0 0 5.5 0.5 1 1 53.033 53.108 3 7.682E-05 15235 20230619_1886_Aki_TMTPro18x_K_F6 123.01 112.1 67133 53118 61905 63580 62905 75063 71349 66821 87411 87702 80454 81962 93443 75013 74469 97414 94091 98278 62023 48726 63355 63505 65566 74839 71935 69393 87909 87361 83434 83232 94047 78826 77269 97506 89864 93320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196840000 25382 3260 23824 47641;47642 38391 38391 1 9606 Homo sapiens -0.07891464541739879 SPYLYPLYGLGELPQGFAR Unmodified 2140.0993 0.099326699 1080;2533 A0A0S2Z3X8;P31150;B4DHX4;Q6IAT1;B4DLV7;P50395;P50395-2;Q5SX87;Q5SX91 GDI1;GDI2 Rab GDP dissociation inhibitor alpha;Rab GDP dissociation inhibitor beta no no 0 0 0 4 0.816 1 1 1 64.892 64.921 3 5.685800000000001E-25 20336 20230619_1883_Aki_TMTPro18x_K_F4 210.09 195.82 45267 43445 53555 51402 40643 46257 47979 49194 42790 66449 75481 68773 65889 53047 61065 63774 72690 79026 41966 39822 53503 51214 43401 47246 47860 50523 45254 66234 75437 69181 67292 55848 62839 64756 69481 74875 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 554050000 25383 1080;2533 23825 47643;47644;47645 38392 38392 1 9606 Homo sapiens 0.0748810089185099 SPYQEFTDHLVK Unmodified 1462.7092 0.70924429 3457;4261 P15880;Q3KQT6;Q8N5L9;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;A4D0Y7;Q8NI62 RPS2;rps2;LOC392781;OK/KNS-cl.6 40S ribosomal protein S2 no no 0 0 0 7 0.816 1 1 1 53.394 53.467 3 4.4112E-07 15336 20230619_1886_Aki_TMTPro18x_K_F6 151.99 133.4 725030 632750 641990 714790 708520 762440 807670 740880 710350 857030 796340 937640 944620 761460 837200 1012800 925250 1006900 670060 579910 660550 715890 732970 767140 805560 761740 733630 861930 820630 941900 954030 804700 859070 1012800 884990 956100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7812199999.999999 25384 3457;4261 23826 47646;47647;47648 38393;38394;38395 38393 3 9606 Homo sapiens -0.0036019592751017626 SQAASILTK Unmodified 917.5182 0.51819605 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72;B3KM27 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 1.5 0.5 1 1 46.835 46.873 2 7.1593E-06 12968 20230619_1881_Aki_TMTPro18x_K_F2 179.53 133.65 142920 111820 122370 128060 150040 172560 159700 159070 204080 163340 174900 150770 179460 135730 152050 182520 191630 164390 131960 102540 126500 128600 154090 170800 161770 163490 204100 164570 180820 153270 181650 143050 157440 181560 182780 156430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167810000 25385 128 23827 47649;47650 38396 38396 1 9606 Homo sapiens 0.05613767551892579 SQACEPSEPEIEIK Unmodified 1615.74 0.73995207 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;P26358-3;A0A7I2V311;B3KVA0 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 0 1.5 0.5 1 1 49.309 49.309 3 0.001661 14154 20230619_1881_Aki_TMTPro18x_K_F2 83.292 58.357 22160 15020 21578 22042 21843 25482 24167 23775 25254 26053 26385 26278 27749 22405 24757 29523 32274 28068 20464 13817 21977 21722 22739 25456 24271 24467 25721 26212 27077 26542 28136 23619 25666 29458 30778 26690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17442000 25386 442 23828 47651;47652 38397;38398 38398 2 9606 Homo sapiens -0.04328830395411387 SQACGGNLGSIEELR Unmodified 1589.7468 0.74676879 2575 Q9Y6E0;Q5U0E6;Q9Y6E0-2;Q6P0Y1;B4DT57;B4DR80;Q6FG81;H0Y630;Q5JV98;Q5JV99 STK24;HEL-S-95 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit yes no 0 0 0 3 0 1 47.897 47.976 2 0.0025909 13224 20230619_1882_Aki_TMTPro18x_K_F3 82.543 60.457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25387 2575 23829 47653 38399 38399 1 9606 Homo sapiens -0.02451472724192172 SQAEFEK Acetyl (Protein N-term) 879.39741 0.39741221 3396 P07108;P07108-6 DBI Acyl-CoA-binding protein yes no 1 0 0 1.5 0.5 1 1 44.855 44.896 2 0.0029866 12217 20230619_1880_Aki_TMTPro18x_K_F1 73.039 52.757 943470 578180 1015400 1026900 1169900 1235800 1082700 1176400 1216600 1131200 1448400 1445700 1478600 1201400 1262800 859280 1683700 1511600 871580 533480 1027700 1002300 1200000 1231800 1101600 1204500 1240600 1155200 1476200 1444200 1497600 1230400 1308600 906960 1605700 1429400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1172000000 25388 3396 23830 47654;47655 38400;38401 38400 2 9606 Homo sapiens -0.047110601615713676 SQAEIINALLK Unmodified 1198.6921 0.69213767 4169 Q7Z4Q2;Q7Z4Q2-2;A0A8I5KR70;Q7Z4Q2-3 HEATR3 HEAT repeat-containing protein 3 yes no 0 0 0 2 0 1 62.423 62.432 3 0.054638 19695 20230619_1881_Aki_TMTPro18x_K_F2 54.343 14.558 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25389 4169 23831 47656 38402 38402 1 9606 Homo sapiens 0.10073928257361331 SQAEQCGTLIR Unmodified 1261.6085 0.60848439 980 B4DDR8;F5H5K2;B4DV99;B4E1A5;B4DSQ6;F5GY88;A0A0B4J1W0;O75448-2;O75448;B9TX64;B9TX63;B9TX65;B9TX72;E9PFL1;B9TX69 MED24 Mediator of RNA polymerase II transcription subunit 24 yes no 0 0 0 4 0 1 37.264 37.308 2 5.6443E-11 8452 20230619_1883_Aki_TMTPro18x_K_F4 158.05 122.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25390 980 23832 47657 38403 38403 1 9606 Homo sapiens -0.011855511819703679 SQAFIEMETR Oxidation (M) 1226.5601 0.56013721 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;H0Y8T4;P43243-2;B4DRS1;B3KM87;Q5CZA7;B4DF66;Q9H4N1 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 yes no 0 1 0 2.5 0.5 1 1 42.393 42.465 2 0.0058155 10649 20230619_1882_Aki_TMTPro18x_K_F3 84.198 62.628 271590 212640 238420 256850 291300 310140 284150 299270 343840 317510 358700 379820 366400 325740 312850 356290 359060 403990 250810 195080 245840 256480 298280 309360 288810 306910 347450 321840 367740 380880 371270 339380 321870 360110 343410 383040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253090000 25391 1059 23833 47658;47659 38404 38404 623 1 9606 Homo sapiens -0.04408044821889234 SQAFIEMETR Unmodified 1210.5652 0.56522259 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;H0Y8T4;P43243-2;B4DRS1;B3KM87;Q5CZA7;B4DF66;Q9H4N1 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 yes no 0 0 0 4 0.816 1 1 1 48.532 48.597 2 2.4002E-05 13483 20230619_1882_Aki_TMTPro18x_K_F3 173.71 134.69 375300 319810 354620 383510 354580 397350 408580 411480 429780 462610 424370 432610 535530 382590 414200 505620 485290 460240 346970 293290 362160 382320 369810 401110 409560 420730 436820 463760 440520 438880 536810 403120 427720 503320 463460 437710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 802330000 25392 1059 23833 47660;47661;47662 38405;38406 38405 2 9606 Homo sapiens -0.03163740959280403 SQAGVSSGAPPGR Unmodified 1169.5789 0.57889882 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 6 0 1 30.284 30.315 2 0.00027273 5859 20230619_1886_Aki_TMTPro18x_K_F6 106.26 81.922 3793.8 1908.5 5798.2 4639.4 8450.7 7889.1 5376.5 6883 5015 2762.8 5280.4 7378.2 6309.7 6536.2 7224.9 2772.1 8332.7 6045 3515 1772.1 5753.2 4499.8 8467.2 7704.2 5595.6 6986.4 5134.8 3156 5469.1 7244.2 6459.4 6566.5 7364.9 3046.2 7946.1 5715.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8858900 25393 349;3906 23834 47663 38407 38407 1 9606 Homo sapiens 0.0008925286417706957 SQAIDLLYWR Unmodified 1263.6612 0.66117189 2026 Q6IAX4;A8K3B9;Q16799-3 RTN1 Reticulon;Reticulon-1 yes no 0 0 0 2 0 1 62.213 62.223 2 2.3249E-05 19612 20230619_1881_Aki_TMTPro18x_K_F2 158.79 127.5 376240 309270 395010 387560 284260 366730 369040 373340 460740 387710 389480 470760 405150 440950 523610 461550 490400 575100 348050 283780 398030 384780 306790 372450 370180 381480 461110 393770 404510 472910 419330 456620 528200 470040 470120 544720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174550000 25394 2026 23835 47664 38408;38409 38409 2 9606 Homo sapiens 0.03988774943127282 SQAIHQLK Unmodified 923.51886 0.51886475 3911 Q15046;Q15046-2;H3BVA8 KARS Lysine--tRNA ligase yes no 0 0 0 1.5 0.5 1 1 36.592 36.621 3 0.0042161 8657 20230619_1880_Aki_TMTPro18x_K_F1 87.913 38.495 32022 21384 36716 44276 44198 48685 43063 42572 42091 37357 48565 48005 46049 33579 41430 31881 50515 49870 29612 19769 37067 42832 45260 48713 43466 43792 43169 38354 49408 47747 46820 35072 42655 33101 48240 47178 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77309000 25395 3911 23836 47665;47666 38410 38410 1 9606 Homo sapiens 0.0540460699162395 SQALIEELLLYK Unmodified 1418.8021 0.80208205 4074 Q5VT52-3;Q5VT52;Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes no 0 0 0 8 0 1 65.173 65.192 3 0.0044238 20041 20230619_1888_Aki_TMTPro18x_K_F8 71.241 50.339 12402 11060 7187.8 7383.3 7610.8 7005.2 7570 15744 11568 8906.1 9500.7 8240.1 11136 8898.6 7480.2 8051.7 11669 12321 11435 10097 7738.9 7781.3 7882.4 7327 7778 15265 11470 9337.9 9901.7 8426.6 11141 9125 7904.3 8341.4 11129 11655 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39289000 25396 4074 23837 47667 38411 38411 1 9606 Homo sapiens 0.10943308805894958 SQALLER Unmodified 815.45012 0.45011648 3949 Q16352 INA Alpha-internexin yes yes 0 0 0 4.5 0.5 1 1 37.805 37.872 2 0.027659 8624 20230619_1885_Aki_TMTPro18x_K_F5 96.311 35.721 359840 274740 338180 250460 79112 79420 121880 113430 150920 282070 355690 351410 350830 292610 302650 345910 419400 380310 332430 251480 340690 253220 103920 94483 122020 118420 160560 277870 354980 351590 355900 306630 315260 348550 399880 361000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 400740000 25397 3949 23838 47668;47669 38412;38413 38413 2 9606 Homo sapiens 0.035009426919032194 SQAPGQPGASQWGSR Unmodified 1512.707 0.70695288 1118;4035 K7EQ55;K7EK33;A0A0S2Z569;Q96EP5-2;Q96EP5;K7EQ02;Q5IRN4 DAZAP1;MEF2D/DAZAP1 fusion DAZ-associated protein 1 no no 0 0 0 5.33 3.09 1 1 1 37.658 37.651 2;3 2.8942999999999997E-19 8514 20230619_1888_Aki_TMTPro18x_K_F8 171.81 163.26 54903 45728 54415 54333 66841 65281 65404 62327 72991 69996 71190 70341 75991 61410 60713 61122 70825 61408 50770 41936 55496 54320 68341 65144 66255 64079 73878 70348 73315 71059 76658 63643 62559 61458 67602 58357 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 406840000 25398 1118;4035 23839 47670;47671;47672 38414;38415;38416 38416 3 9606 Homo sapiens -0.028892316125848083 SQAPLESSLDSLGDVFLDSGR Unmodified 2192.0597 0.059706308 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 4 0 1 64.851 64.861 3 7.9231E-07 20349 20230619_1883_Aki_TMTPro18x_K_F4 98.3 90.678 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25399 349;3906 23840 47673 38417 38417 1 9606 Homo sapiens 0.011358843597918167 SQASADEYSYVA Unmodified 1289.5412 0.54117591 964 Q13617-2;Q13617;A0A0A0MTN0;A0A8I5QJI3;A0A8I5KYP8;A0A140VKB1;A0A8I5KUA9;A0A8I5KQQ5;Q5T2B5;A0A8I5KU22;A0A0D9SET6;A0A8I5KVR3;A0A8I5KYZ8 CUL2 Cullin-2 yes no 0 0 0 2 0 1 48.286 48.357 2 0.0025031 13673 20230619_1881_Aki_TMTPro18x_K_F2 91.584 83.985 157630 114530 151370 132580 151390 162240 169370 143110 188450 50890 49507 40615 63234 41950 86451 57114 59308 56894 145610 105060 154170 132870 157710 161380 170180 145150 184920 56348 57963 41885 65171 44102 85836 57228 56991 54049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150780000 25400 964 23841 47674 38418 38418 1 9606 Homo sapiens -0.09201302911947096 SQAVEKPPSEK Unmodified 1198.6194 0.61936665 4179 Q7Z7K6;Q7Z7K6-3;A0A0M3HER2 CENPV Centromere protein V yes no 0 0 1 6 0 1 37.157 37.225 3 0.0013453 8416 20230619_1886_Aki_TMTPro18x_K_F6 90.926 77.247 25989 9802.6 31678 33858 32177 53206 27114 35736 44249 24367 42115 68905 44531 54334 29852 23125 69518 77572 23994 9195.6 31742 32396 33411 51824 28196 37409 43935 26639 43569 67303 44831 54853 32759 26813 66186 73072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19838000 25401 4179 23842 47675 38419 38419 1 9606 Homo sapiens 0.028001744639368553 SQAVEKPPSEKPR Unmodified 1451.7732 0.77324153 4179 Q7Z7K6;Q7Z7K6-3;A0A0M3HER2 CENPV Centromere protein V yes no 0 0 2 7.5 0.5 1 1 34.992 35.026 4 0.0004055 7366 20230619_1887_Aki_TMTPro18x_K_F7 95.57 84.308 93336 75021 106910 106190 121470 115120 107780 93523 99002 85816 107280 75991 78030 60914 117990 44167 61924 36828 86400 68936 107660 104760 124420 115270 109220 96900 101620 86872 108280 77104 82338 62466 115760 44518 59616 35149 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92279000 25402 4179 23843 47676;47677 38420;38421 38420 2 9606 Homo sapiens 0.06542584229441673 SQDAEVGDGTTSVTLLAAEFLK Unmodified 2251.122 0.12197221 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;F8WAM2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 5.5 1.71 1 1 1 1 1 1 65.468 65.498 3 1.1467E-23 20292 20230619_1887_Aki_TMTPro18x_K_F7 186.63 164.15 69079 54422 61073 68454 51757 65530 61691 66338 72295 68679 78402 78272 85055 71041 79538 80719 74718 86296 63799 49948 62615 67938 54865 66484 61995 67787 73275 69579 80449 78802 86308 74041 80722 81274 71617 81863 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1917499999.9999998 25403 4005 23844 47678;47679;47680;47681;47682;47683 38422;38423;38424;38425;38426 38426 5 9606 Homo sapiens 0.04645610708166714 SQDFYEK Unmodified 915.39741 0.39741221 1143 A0A0S2Z5U1;Q8N183 NDUFAF2 Mimitin, mitochondrial yes no 0 0 0 3.5 0.5 1 1 43.947 44.004 2 0.0047695 11253 20230619_1883_Aki_TMTPro18x_K_F4 154.71 109.39 469050 341250 445780 508370 436020 444920 397260 405750 502630 557480 653410 602340 678920 552070 516590 546670 765130 664400 433240 313890 454840 498560 452600 453840 406440 421520 512320 556640 663810 607730 684350 571170 541950 555990 728970 630170 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 234070000 25404 1143 23845 47684;47685 38427;38428;38429 38429 3 9606 Homo sapiens -0.06367060161562677 SQDGASQFQEVIR Acetyl (Protein N-term) 1505.711 0.71103521 1248 Q16851-2;A0A140VKE1;A0A7I2YQ74;A0A087WYS1;A0A7I2V676;C9JNZ1;A0A7I2V4T0;C9JVG3;C9JWG0;A0A7I2V2Q3;C9JUW1;C9JTZ5;F2Z3H1;F2Z3P4;F8WC70;C9J3M0 UGP2 UTP--glucose-1-phosphate uridylyltransferase yes no 1 0 0 1.5 0.5 1 1 52.401 52.42 2 8.4708E-17 15509 20230619_1881_Aki_TMTPro18x_K_F2 157.66 129.49 75099 66380 75658 74358 74778 79716 83586 85618 106710 100460 98539 92665 112410 91518 98580 109150 106070 111700 69481 60829 76787 74553 77986 80368 84491 87434 107090 100520 102050 94420 113610 95414 100960 109520 101450 106040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63489000 25405 1248 23846 47686;47687 38430;38431 38431 2 9606 Homo sapiens -0.021591869095345828 SQDGPYQIK Unmodified 1034.5033 0.50327426 3018 Q13332;Q13332-6;Q13332-7;Q9UM81;G8JL96;Q13332-5;Q59FX6;Q13332-3;Q13332-4;Q13332-2;D6W633;D6W632 PTPRS;PTPsigma Receptor-type tyrosine-protein phosphatase S;Protein-tyrosine-phosphatase yes no 0 0 0 6 0 1 43.213 43.306 3 0.058872 10912 20230619_1886_Aki_TMTPro18x_K_F6 48.284 20.11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25406 3018 23847 47688 38432 38432 1 9606 Homo sapiens -0.012597243161053484 SQDLHCGACR Unmodified 1202.4921 0.49207442 2984 F8W031;F8VXJ7;Q9Y2B0;F8VP03;F8W1U5;Q9Y2B0-2 CNPY2 Protein canopy homolog 2 yes no 0 0 0 8 0 1 26.683 26.717 3 0.0025493 4555 20230619_1888_Aki_TMTPro18x_K_F8 80.979 66.103 5744.8 2974.6 7930.8 8608 12938 11295 8457.4 10678 11254 7572.6 8972.2 9684.3 8729.2 8330.1 10963 4382.8 11558 9714.3 5316.6 2771.9 7949 8252.6 12898 11198 8878.2 10861 11209 7889.5 9312.1 9678.9 9030.7 8432.3 11103 4789 11040 9177 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4119900 25407 2984 23848 47689 38433 38433 1 9606 Homo sapiens -0.10107192953546473 SQDLSLQEAETEQSDTLDNK Unmodified 2250.0135 0.013543977 2537 B4DM37;B7Z3A3 yes no 0 0 0 1 0 1 52.762 52.762 3 0.0051042 15494 20230619_1880_Aki_TMTPro18x_K_F1 64.723 56.535 7476.3 6328.3 7794.1 5887.2 5248.2 7166.8 5703.7 7698.6 8176.2 8631.8 10561 9872.4 10592 9184.8 10300 10240 9535.9 13312 6917 5791 7840.9 6009.3 5680.3 7163 5814.3 7845.2 8283.4 8709.8 10720 9947.9 10793 9557.2 10438 10445 9157.4 12597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24500000 25408 2537 23849 47690 38434 38434 1 9606 Homo sapiens -0.06146225332940958 SQDNVIK Unmodified 802.41848 0.418482 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;P55060-2 CSE1L Exportin-2 yes no 0 0 0 4.5 0.5 1 1 38.305 38.372 2 0.018701 8890 20230619_1883_Aki_TMTPro18x_K_F4 113.5 37.369 71234 37565 95405 96737 128690 124540 85389 115690 95869 76075 131430 136590 93511 109560 115720 51819 140070 131110 65907 34912 95367 93077 129690 123540 89089 117680 98361 80845 131580 134910 97901 110800 118260 57669 133720 123730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 70837000 25409 1462 23850 47691;47692 38435;38436 38435 2 9606 Homo sapiens 0.009369499379431545 SQDSGIAEMEELPVPHNIK Unmodified 2093.0099 0.0099193444 42 A0A024QZK4;Q96FC7;Q96FC7-2 PHYHIPL Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 0 3.5 0.5 1 1 56.566 56.587 3 8.1543E-15 16886 20230619_1883_Aki_TMTPro18x_K_F4 160.47 137.59 126480 107910 126590 109700 64114 77507 100900 103100 116550 152690 135840 147110 158690 125830 131050 182020 158340 176830 116990 98813 127530 110370 72594 81477 100210 104910 118790 151380 139520 148860 159880 133520 135550 181550 151370 167940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 185690000 25410 42 23851 47693;47694 38437;38438;38439 38439 3 9606 Homo sapiens 0.007134781501918042 SQDSMSSDTAR Unmodified 1183.4775 0.4775298 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46;Q7Z6P5 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 1 0 1 28.937 28.937 2 0.00016453 5568 20230619_1880_Aki_TMTPro18x_K_F1 132.32 121.46 7426.5 4012.1 7050.8 8492.5 13496 17047 8316.4 12154 9398.8 5762.4 12724 12198 11479 11597 12306 1958.3 12945 11991 6849.6 3714.6 7300.4 8304.1 13390 16457 8730.9 12570 9628 6370.9 12843 12064 11803 11476 12475 2721.3 12373 11286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4893100 25411 1104 23852 47695 38440 38440 1 9606 Homo sapiens -0.10686986620680727 SQDSPGESEETLR Unmodified 1433.627 0.62703081 1920 A2VDI9;Q8IWU2 LMTK2 Serine/threonine-protein kinase LMTK2 yes no 0 0 0 1 0 1 34.928 34.928 2 2.1028E-05 7931 20230619_1880_Aki_TMTPro18x_K_F1 122.33 111.1 8394.3 5774.9 8399.7 6774.4 4446.8 8928.3 6937.5 6422.4 9479.4 7339.4 9667 12941 10852 8188.4 8608.1 8518.2 12242 11347 7754.3 5299.5 8467 6790.5 5035.3 8797.6 6933.9 6763.9 9508.1 7542.7 9980.4 12708 10928 8624.5 8991.5 8714.1 11672 10751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7677100 25412 1920 23853 47696 38441 38441 1 9606 Homo sapiens -0.07243762797065756 SQDVDQLR Unmodified 959.46722 0.46722311 3001 G1UI16;Q29RF7;B3KMN2;Q96DB6 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 0 2 0 1 35.617 35.673 2 8.3634E-05 7955 20230619_1881_Aki_TMTPro18x_K_F2 182.73 113.35 55376 22756 55757 60252 71591 105010 65065 70075 83017 66188 76943 93152 96731 76473 55400 50572 115570 103530 51049 21196 56906 58234 73172 101820 66544 73868 83288 67982 80145 92651 96152 78164 60334 54222 109910 97819 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104800000 25413 3001 23854 47697 38442 38442 1 9606 Homo sapiens -0.014131814929442044 SQDVELWEGEVVK Unmodified 1516.7409 0.74093835 3999 Q53GG0;Q9UHB6;F8VQE1;B4DN52;Q9UHB6-2;Q9UHB6-4;F8VS07;B3KTW2;Q9UHB6-3;Q9UHB6-5 LIMA1 LIM domain and actin-binding protein 1 yes no 0 0 0 2.33 0.471 2 1 59.197 59.218 2;3 9.4689E-05 18111 20230619_1882_Aki_TMTPro18x_K_F3 102.5 88.826 41940 34156 37074 39027 26704 42619 34548 34107 40458 44888 41805 32439 43317 46135 40662 45588 43449 38112 38743 31314 37933 39063 28895 42606 34583 35721 40960 44435 42833 33994 44099 47070 41574 45400 41508 36298 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75764000 25414 3999 23855 47698;47699;47700 38443;38444 38444 2 9606 Homo sapiens 0.003237520357743051 SQEAQVLK Unmodified 901.4869 0.48689592 2878 E5RGX5;Q93045;B7Z4N6;Q93045-2 STMN2 Stathmin;Stathmin-2 yes no 0 0 0 4.5 0.5 1 1 40.748 40.813 2 2.3579E-05 9836 20230619_1885_Aki_TMTPro18x_K_F5 209.84 129.9 539300 320890 772680 644970 371130 392740 393740 457840 388020 488120 799920 726840 576690 598160 621670 273760 740390 579880 499620 296690 758370 621310 417090 417440 397110 464570 411610 498530 791080 722190 598320 603900 635870 298800 706140 548120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 580400000 25415 2878 23856 47701;47702 38445 38445 1 9606 Homo sapiens 0.032211945178119095 SQEATEAAPSCVGDMADTPR Oxidation (M) 2107.8786 0.87864717 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;Q1WWK5;K7ER14 SEPT9 Septin-9 yes no 0 1 0 1 0 1 38.753 38.753 3 2.1234E-11 9559 20230619_1880_Aki_TMTPro18x_K_F1 128.66 119.5 13290 8546.5 10017 13122 12389 14378 18576 15511 15646 16805 18823 20310 18565 15068 13867 22671 23620 20208 12248 7868.4 10510 12884 12847 14461 18266 15811 16230 17012 19158 20288 18738 16113 14769 22494 22482 19232 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106130000 25416 541 23857 47703 38446 38446 317 1 9606 Homo sapiens -0.13097700280059144 SQEATEAAPSCVGDMADTPR Unmodified 2091.8837 0.88373255 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;Q1WWK5;K7ER14 SEPT9 Septin-9 yes no 0 0 0 1.5 0.5 1 1 44.077 44.118 3 1.2782E-29 11721 20230619_1881_Aki_TMTPro18x_K_F2 197.86 189.15 31021 23058 27151 36321 33942 45545 35043 32938 43779 42871 36726 47753 47874 39131 35965 44458 47508 48577 28638 21222 28072 35664 34836 45028 35522 34797 43858 42959 38565 47909 47945 40942 37463 44798 45351 46091 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 373980000 25417 541 23857 47704;47705 38447 38447 1 9606 Homo sapiens -0.1185339641747305 SQECYFDPELYR Unmodified 1605.677 0.67695789 558 A0A024R972;P11047 LAMC1 Laminin subunit gamma-1 yes no 0 0 0 3 0.816 1 1 1 54.905 54.932 2 0.00050856 16321 20230619_1882_Aki_TMTPro18x_K_F3 105.36 99.118 53876 46659 50916 56823 51516 63304 58209 54974 63047 82009 68912 62759 86686 60141 61052 92695 79432 72505 49813 42794 52023 56626 53699 63324 58458 57455 64318 80827 71139 64535 86611 63897 63720 91397 75775 69105 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44630000 25418 558 23858 47706;47707;47708 38448 38448 1 9606 Homo sapiens -0.1016535139278858 SQEDDLNR Unmodified 975.42575 0.42575222 449 A5PKY0;A0A024R7G6;M0R165;A8K5P4;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2;B4DQX5;B4DME4 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 1 0 1 29.957 29.957 2 0.01672 5976 20230619_1880_Aki_TMTPro18x_K_F1 90.657 78.431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25419 449 23859 47709 38449 38449 1 9606 Homo sapiens -0.06294362252276642 SQEDTEAVFKK Unmodified 1280.6248 0.62484596 4630 Q9NYH9;B3KX32;B3KQ21;Q9P1J8 UTP6 U3 small nucleolar RNA-associated protein 6 homolog yes no 0 0 1 5 0 1 44.782 44.859 3 0.00030746 11572 20230619_1885_Aki_TMTPro18x_K_F5 105.65 80.212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25420 4630 23860 47710 38450 38450 1 9606 Homo sapiens -0.004241467442625435 SQEEPKDTFEHDPSESIDEFNK Unmodified 2607.1249 0.12488534 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8;Q9NYF8-4;E9PJA7 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 1 3 0 1 49.785 49.86 4 0.019283 14053 20230619_1882_Aki_TMTPro18x_K_F3 56.766 43.709 67256 53280 54258 76241 70407 71664 76693 79109 68338 85370 77909 71585 78252 64890 80312 68356 74486 70483 62078 48967 56575 75003 71969 72980 76707 80466 70575 85466 79485 73048 79920 67370 81239 68806 71297 66937 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104680000 25421 4629 23861 47711 38451 38451 1 9606 Homo sapiens -0.11439210695652946 SQEESEEGEEDATSEVDK Unmodified 1996.7869 0.78689808 2218 B2R5M3;P05060;B4DEA7;A0A0A0MT66 CHGB Secretogranin-1;PE-11;GAWK peptide;CCB peptide yes no 0 0 0 1 0 1 41.841 41.841 3 9.3143E-07 10902 20230619_1880_Aki_TMTPro18x_K_F1 111.62 108.13 27699 23513 24048 43774 21638 22569 40474 41234 46125 32880 36285 35280 35020 36228 21586 45299 45034 43234 25591 21680 24828 42219 23166 24830 39865 40641 46208 33758 37608 35781 35221 37785 23612 45186 42849 41092 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64698000 25422 2218 23862 47712 38452 38452 1 9606 Homo sapiens -0.17162388891892988 SQEGRPVQVIGALIGK Unmodified 1650.9417 0.94170385 2215 B2R514;E7EM64;Q7L5N1;B4DHR8 COPS6 COP9 signalosome complex subunit 6 yes no 0 0 1 3.5 0.5 1 1 57.189 57.208 3 2.1389E-10 17141 20230619_1883_Aki_TMTPro18x_K_F4 145.62 126.52 279590 235580 278340 305580 266810 301160 314960 320360 361780 359590 346280 332990 384000 297320 345200 402830 356430 392970 258570 216220 282860 302790 279420 305280 316270 326990 365410 360480 357580 338180 388670 313620 352660 402370 341170 373220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 426140000 25423 2215 23863 47713;47714 38453;38454;38455 38455 3 9606 Homo sapiens 0.14227066143121192 SQEGSQFVK Unmodified 1008.4876 0.4876242 2699 B7Z7P8;P62495-2;P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 5.5 0.5 2 2 41.008 41.099 2;3 9.806E-06 9959 20230619_1885_Aki_TMTPro18x_K_F5 174.02 124.58 227820 148830 231690 239770 279850 297820 266720 263430 329980 301360 324000 321490 369920 290710 275450 254970 380620 326770 210420 137100 235800 235280 286500 295860 271640 272480 332360 303260 334580 324230 371510 299240 287390 260940 362790 309810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 654310000 25424 2699 23864 47715;47716;47717;47718 38456;38457 38456 2 9606 Homo sapiens -0.016280108331329757 SQEIFLNLK Unmodified 1090.6023 0.60226003 546 E9PQC4;A0A024R8Y0;Q9BZD4 NUF2;CDCA1 Kinetochore protein Nuf2 yes no 0 0 0 8 0 1 58.954 58.995 2 0.0039277 17376 20230619_1888_Aki_TMTPro18x_K_F8 103.55 39.455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25425 546 23865 47719 38458 38458 1 9606 Homo sapiens 0.060582986487816015 SQELEVK Unmodified 831.4338 0.43379771 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3.5 0.5 1 1 41.93 41.982 2 0.027535 10456 20230619_1882_Aki_TMTPro18x_K_F3 96.367 22.112 165480 88090 227070 223100 259270 305900 228480 299110 264430 187690 303260 369880 275490 266030 314890 133480 365480 339350 153150 81838 226020 215060 265960 302490 233560 302880 268480 201190 308660 363270 284150 270860 321240 148420 349020 320230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129080000 25426 3881 23866 47720;47721 38459 38459 1 9606 Homo sapiens 0.011338167351482298 SQENIDQLAA Unmodified 1087.5146 0.51456723 4615 Q9NWY4 C4orf27 UPF0609 protein C4orf27 yes yes 0 0 0 1 0 1 48.886 48.886 2 0.02806 13916 20230619_1880_Aki_TMTPro18x_K_F1 69.905 53.447 53660 75336 66231 54447 58528 47693 79033 55069 47313 56549 58328 41156 53505 33230 101190 45797 45867 43438 49936 68723 66042 56753 61681 49058 77497 55862 50463 56561 59130 42259 56873 35275 98699 45866 44403 41292 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33764000 25427 4615 23867 47722 38460 38460 1 9606 Homo sapiens -0.025689470126280867 SQEQEVLER Unmodified 1116.5411 0.54111633 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 0 1 0 1 36.423 36.423 2 1.0438E-11 8523 20230619_1880_Aki_TMTPro18x_K_F1 218.94 156.83 150320 110190 116120 133930 146610 160850 156390 151830 197650 170350 193260 189960 201850 168900 164470 197310 221540 194360 138640 101130 121380 133650 150270 160410 158330 156230 198750 171840 198790 191290 204000 176410 171220 197580 211230 184730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191460000 25428 2896 23868 47723 38461 38461 1 9606 Homo sapiens -0.01249258121265484 SQERPTFYR Acetyl (Protein N-term) 1224.5887 0.58873523 744 A0A024RD15;Q16539-5;Q16539-3;Q16539-4;Q16539;L7RSM2;Q16539-2;B5TY33 MAPK14 Mitogen-activated protein kinase;Mitogen-activated protein kinase 14 yes no 1 0 1 4 0 1 35.414 35.462 2 3.8991E-07 7710 20230619_1883_Aki_TMTPro18x_K_F4 60.76 19.814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25429 744 23869 47724 38462 38462 1 9606 Homo sapiens -0.01457559130426489 SQESGYYDR Unmodified 1103.452 0.45196697 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 0 1.5 0.5 1 1 32.453 32.483 2 3.3248E-08 6654 20230619_1881_Aki_TMTPro18x_K_F2 225.66 157.68 229650 126960 262440 285570 340500 376160 314870 345160 320690 329680 447040 474810 458060 413310 371700 211580 526340 448650 212170 117660 265200 276200 346670 372450 319330 354260 331370 338380 453300 472810 463230 417880 387040 229750 501560 423900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 924070000 25430 1059 23870 47725;47726 38463;38464 38464 2 9606 Homo sapiens -0.09562093080808154 SQETECTYFSTPLLLGK Unmodified 1972.9452 0.94519382 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 6.5 0.5 1 1 62.559 62.603 3 8.8338E-10 19306 20230619_1886_Aki_TMTPro18x_K_F6 141 132.44 69507 56265 63704 92768 64906 70643 75019 90317 91334 93808 85391 107540 94460 79950 81004 89497 105320 101300 64223 51798 65388 90322 67620 73519 75594 91001 91938 94977 88429 107500 95505 83895 83990 90426 100510 96104 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6656999999.999999 25431 297 23871 47727;47728 38465 38465 1 9606 Homo sapiens -0.0023609665583990136 SQEVTRDEESTR Unmodified 1435.6539 0.65391426 1067 C9J9Y9;A0A0U1RQD7;C9JYK5;F1LLU6;A0A0S2Z3F5;A0A0S2Z3K4;J3QTA2;Q99933-4;Q99933-3;Q99933-2;Q99933 BAG1 BAG family molecular chaperone regulator 1 yes no 0 0 1 1 0 1 27.52 27.52 3 0.011749 5039 20230619_1880_Aki_TMTPro18x_K_F1 73.36 42.132 4472.2 1771.2 6305 6972.1 8083.8 11732 8078.5 10715 6482.7 4472.8 7356.5 9968.8 6191.5 7224.1 10056 2416.4 9161.9 10389 4136 1667.3 6288.2 6662.7 8267.5 11456 8104.2 10840 6718.4 5019.5 7483.5 9763.4 6551.4 7287.8 10065 2976.9 8783.2 9778.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6606500 25432 1067 23872 47729 38466 38466 1 9606 Homo sapiens -0.04648654185916712 SQFSDKPVQDR Unmodified 1305.6313 0.63132832 714 E9PPA0;A0A024RCB5;B7Z705;B4DN31;Q9BWS9-3;Q9BWS9;E9PKF1;E9PI70;E9PIP0;E9PRL3;E9PPH0 CHID1 Chitinase domain-containing protein 1 yes no 0 0 1 5.5 0.5 1 1 36.967 37.047 3 0.00036769 8344 20230619_1886_Aki_TMTPro18x_K_F6 105.66 86.417 120210 109120 119200 130140 161200 154020 157180 157050 190910 155570 185440 189680 178300 155870 176150 189870 202020 175390 111230 100040 121850 130030 163850 154070 159720 160190 192230 158390 190240 189920 182160 163620 180660 189430 192850 166840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 247680000 25433 714 23873 47730;47731 38467;38468 38468 2 9606 Homo sapiens -0.009262087928846086 SQFTITPGSEQIR Unmodified 1462.7416 0.74160705 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;A0A7I2V614;B4DEC3;Q71UF1;B4DW08;A0A7I2V538;O75944 ACO2;ACON Aconitate hydratase, mitochondrial yes no 0 0 0 6.5 0.5 1 1 48.102 48.186 2 1.5782000000000001E-27 12733 20230619_1887_Aki_TMTPro18x_K_F7 251.75 195.74 189470 168080 177040 210210 221100 223300 252190 250190 255970 261230 265800 284910 281120 247410 266770 298580 302170 324420 175190 154180 181770 209000 226810 225470 252540 254020 261030 264060 273100 286870 285830 259150 273650 300570 288920 307780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 385100000 25434 1050 23874 47732;47733 38469;38470 38470 2 9606 Homo sapiens 0.02874591475529087 SQFYFLTK Unmodified 1032.528 0.52803245 2021 Q8IWA0;A8K330 WDR75 WD repeat-containing protein 75 yes no 0 0 0 4 0 1 59.663 59.665 2 0.010688 18199 20230619_1883_Aki_TMTPro18x_K_F4 98.048 33.212 50619 48749 56630 58418 47560 61926 56200 53800 64368 50126 44384 43529 54723 43544 52921 60832 49244 53434 46904 44688 56912 58250 50415 62149 56422 55444 64297 50697 46940 44527 55422 45842 53689 60414 47181 50815 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32265000 25435 2021 23875 47734 38471 38471 1 9606 Homo sapiens 0.0130695555726561 SQGAALDK Unmodified 788.40283 0.40283194 3570 V9HWF2;P40925;P40925-3;A0A5K1VW95;P40925-2;C9JF79;C9JRL4 HEL-S-32;MDH1 Malate dehydrogenase;Malate dehydrogenase, cytoplasmic yes no 0 0 0 4 0 1 37.399 37.443 2 0.0064989 8509 20230619_1883_Aki_TMTPro18x_K_F4 118.71 43.499 46797 22206 58206 62314 99305 89447 66562 95424 57969 39994 80972 98111 55089 66523 81018 31620 94548 91138 43246 20690 58789 59915 98797 88469 68849 95508 60360 45111 81033 95813 58415 67769 82392 35836 90309 85945 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19121000 25436 3570 23876 47735 38472 38472 1 9606 Homo sapiens 0.00016663420910845161 SQGCSEQVLTVLK Unmodified 1447.7341 0.73407884 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7.5 0.5 1 1 53.613 53.682 3 2.9662E-06 15171 20230619_1887_Aki_TMTPro18x_K_F7 134.21 120.3 500810 420300 503670 432830 466230 501260 483740 513510 564590 482140 530660 574140 568540 492570 479270 597720 745590 600960 463180 384940 510350 437450 487690 502200 489530 522810 569050 491830 547940 576000 575230 516230 504200 598810 709800 571290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1271800000 25437 3758 23877 47736;47737 38473;38474;38475 38473 3 9606 Homo sapiens 0.028121158835574533 SQGDSNPAAIPHAAEDIQGDDR Acetyl (Protein N-term) 2305.0207 0.02069504 3749 V9HW44;P68402;P68402-3;P68402-2;P68402-4 HEL-S-303;PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta yes no 1 0 0 1 0 1 44.69 44.69 3 3.4877E-08 12127 20230619_1880_Aki_TMTPro18x_K_F1 103.26 98.459 7791.3 5210.5 7289.1 9855.8 5924.1 10260 9032.5 7639.1 10922 8021.2 9713.4 8271.1 11585 8522.1 8621.1 9145.5 12086 10880 7192.3 4810.1 7447.3 9562.1 6377.5 10266 8980.7 8004.2 10958 8105 10092 8401.9 11618 8825.5 9011.4 9275.8 11522 10319 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232960000 25438 3749 23878 47738 38476 38476 1 9606 Homo sapiens -0.07961447941852384 SQGGDGFYGR Unmodified 1042.4468 0.44682202 1340 A0A2P9DU05;A0A8V8TL82;O75116;D6REE7;E9PF63;C9JFJ0 ROCK2 Rho-associated protein kinase 2 yes no 0 0 0 4 0 1 36.166 36.212 2 0.00037643 8006 20230619_1883_Aki_TMTPro18x_K_F4 128.81 97.389 42947 30898 36302 37709 39477 43699 42318 40202 45131 58890 60465 55092 67003 49036 42124 67342 72139 56993 39631 28360 37486 37604 40846 43660 42602 41807 46495 58378 61529 55924 66962 51775 45061 66724 68627 54298 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38770000 25439 1340 23879 47739 38477 38477 1 9606 Homo sapiens -0.0727035215277283 SQGGDGYYGR Unmodified 1058.4417 0.44173664 1153 A0A0U1RQV4;D9ZGF8;Q13464 ROCK1 Rho-associated protein kinase;Rho-associated protein kinase 1 yes no 0 0 0 3 0 1 31.886 31.964 2 0.004324 6359 20230619_1882_Aki_TMTPro18x_K_F3 91.867 54.139 7869.7 4978 8462.7 12161 13333 12735 10005 12151 11393 10687 20648 21510 15645 17845 16154 6819 20189 20393 7271.1 4617.1 8639.6 11678 13358 12812 10335 12418 11876 11207 20535 21201 16178 17938 16587 7824 19279 19225 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5535700 25440 1153 23880 47740 38478 38478 1 9606 Homo sapiens -0.08514656015381661 SQGGEPTYNVAVGR Unmodified 1433.6899 0.68990583 2552;2741 C9J0J7;G5E9Q6;B4DNH1;D3DNI2;P35080-2;D3DNI3;C9JQ45;C9J712;P35080 PFN2 Profilin;Profilin-2 no no 0 0 0 5 0.816 1 1 1 40.159 40.234 2 1.3234999999999999E-21 9616 20230619_1886_Aki_TMTPro18x_K_F6 256.96 228.79 395220 333450 373300 430310 382390 390670 365460 362440 392460 432680 501300 528690 479590 431880 448320 510140 527960 540480 365350 306040 381410 425990 395830 397530 370560 374350 402780 436330 508450 529040 488850 452680 461180 512920 504470 512980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1517999999.9999998 25441 2552;2741 23881 47741;47742;47743 38479;38480;38481 38481 3 9606 Homo sapiens -0.009591522184109635 SQGMALSLGDK Unmodified 1105.5438 0.54375887 3646 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 7 0 1 50.402 50.483 3 0.0054077 13801 20230619_1887_Aki_TMTPro18x_K_F7 60.157 32.676 443110 357060 383380 401620 437750 535110 476770 481260 615030 446320 439510 410350 489220 366040 464240 552050 472480 433010 409230 327320 395440 403760 452220 529640 482540 494280 611310 452240 461200 417160 496300 388950 473440 544850 451710 412680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166620000 25442 3646 23882 47744 38482;38483 38482 2 9606 Homo sapiens -0.004791259879766585 SQGPLEVAEAAVSQSSGLAAK Unmodified 1999.0222 0.02219859 55 Q9P0M6;A0A024QZP6;A0A7I2V412;Q9HA11;Q5SQT3 H2AFY2 Core histone macro-H2A.2;Core histone macro-H2A;Histone H2A yes no 0 0 0 7.5 0.5 1 1 62.777 62.813 3 2.6822E-16 19063 20230619_1887_Aki_TMTPro18x_K_F7 151.22 137.14 66155 56340 63350 73126 64455 87097 76537 79167 74974 70901 79748 79479 90555 81594 81487 88985 90392 104150 61166 51710 64689 72629 67298 86773 76440 81200 76649 72376 82081 80416 91682 84493 83557 90128 86496 98714 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 306900000 25443 55 23883 47745;47746 38484;38485 38484 2 9606 Homo sapiens 0.06264837884850749 SQICDNAALYAQK Unmodified 1480.698 0.69802768 1462 A0A384NKW7;P55060-3;P55060;B4DUC5;B4DS32;B4DM67 CSE1L Exportin-2 yes no 0 0 0 6.5 0.5 1 1 48.438 48.52 3 1.7179E-06 12879 20230619_1887_Aki_TMTPro18x_K_F7 139.19 109.65 187500 164850 176690 185810 167970 186990 210060 200470 214030 267570 231740 236200 302960 245090 210420 334420 309770 281790 173370 151080 180330 186020 176280 189370 209500 205650 218890 265790 240000 241620 302560 257260 221750 331300 295230 268310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 716860000 25444 1462 23884 47747;47748 38486 38486 1 9606 Homo sapiens -0.023093412932894353 SQIEQLK Unmodified 844.46543 0.46543219 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7;H0YJV5 KTN1 Kinectin yes no 0 0 0 5.5 0.5 1 1 44.178 44.263 2 0.013039 11388 20230619_1886_Aki_TMTPro18x_K_F6 114.5 22.598 135610 98869 132860 147840 135500 148300 154370 135250 169610 161680 193880 196810 208550 150770 170790 152360 223220 205950 125290 90945 135330 145210 141030 149590 155020 139900 172840 163060 198400 196560 210430 157320 177100 156150 212950 195110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 187010000 25445 380 23885 47749;47750 38487;38488 38488 2 9606 Homo sapiens 0.03697809489085557 SQIFSTASDNQPTVTIK Unmodified 1835.9265 0.92650729 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 8 0 1 54.967 55.033 3 4.8738E-14 15684 20230619_1888_Aki_TMTPro18x_K_F8 126.42 105.48 82064 64037 68194 74620 71382 79501 84415 85065 89380 93114 88942 79802 99774 90661 94980 120010 96805 105510 75754 58730 70521 74574 74275 80159 84515 86715 90805 93274 91707 82091 101300 94683 96912 119240 92665 100340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2573800000 25446 3429 23886 47751 38489 38489 1 9606 Homo sapiens 0.041981097645930276 SQIGNTESELK Unmodified 1204.5935 0.59354583 1624 Q8TB36;Q8TB36-2;A0A6Q8PGS2;A0A6Q8PGL3;B4DIH2;A0A6Q8PH79;A0A6Q8PFG4;A0A7I2RYU0;A0A6Q8PHN7;A0A6Q8PH88;A0A6Q8PEX8;A0A6Q8PH97;A0A6Q8PHC1;A0A6Q8PFF4 GDAP1 Ganglioside-induced differentiation-associated protein 1 yes no 0 0 0 3.5 0.5 2 2 43.602 43.659 2;3 1.6681E-08 11214 20230619_1882_Aki_TMTPro18x_K_F3 197.3 123.31 263160 187620 320720 292230 337720 325040 307700 323760 354710 217370 263410 242620 226550 183930 231780 251810 276720 249870 243580 172680 321000 286920 348150 326130 313570 327990 354590 226330 272830 243430 232690 195270 238180 251780 264140 237450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 278400000 25447 1624 23887 47752;47753;47754;47755 38490;38491 38490 2 9606 Homo sapiens -0.0005671977833117126 SQIHDIVLVGGSTR Unmodified 1480.7998 0.79979063 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;P11142-2;Q53HF2;B4E1Q1;A8K7Q2;E9PN89 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 0 0 5.33 3.09 1 1 1 44.829 44.867 3 6.9369E-47 12219 20230619_1880_Aki_TMTPro18x_K_F1 248.24 196.37 381290 316410 373340 417390 389440 457140 409250 399050 469850 437620 364930 366430 392580 302210 333180 427540 405110 419580 352540 290480 380440 413600 404060 457800 413340 412760 471250 438130 380550 373000 396880 320720 344340 426860 387010 398550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6263799999.999999 25448 3430 23888 47756;47757;47758 38492;38493;38494 38492 3 9606 Homo sapiens 0.07862273120781538 SQIPLSK Unmodified 771.44905 0.44905385 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 1.5 0.5 1 1 44.577 44.619 2 0.012673 12120 20230619_1880_Aki_TMTPro18x_K_F1 114.99 31.674 1170000 772750 1117400 1251800 1437800 1529000 1347300 1443200 1674300 1420900 1678500 1664200 1237200 1392000 930340 1156500 1862200 1779600 1080200 711850 1145100 1227600 1465800 1522500 1373900 1479400 1686100 1445000 1701700 1668300 1265400 1431700 1004000 1200200 1772200 1684000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1512599999.9999998 25449 3444 23889 47759;47760 38495;38496 38495 2 9606 Homo sapiens 0.05418728323002142 SQISSLSSTER Unmodified 1193.5888 0.58879481 4234 Q8N5G2-2;Q8N5G2-3;Q8N5G2 TMEM57 Macoilin yes no 0 0 0 5 0 1 38.006 38.099 2 6.2609E-06 8757 20230619_1885_Aki_TMTPro18x_K_F5 172.21 138.84 21125 14487 15826 17508 16346 24712 21144 21433 33159 22230 23593 24261 23655 20728 23074 27893 29327 27381 19473 13298 16547 17525 17156 24347 21397 22137 32676 22514 24662 24428 24131 21872 23845 27870 27985 26019 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10875000 25450 4234 23890 47761 38497 38497 1 9606 Homo sapiens -0.0002560392110808607 SQIVTNVR Unmodified 915.51378 0.51377937 1249 Q53ZP9;A0A140VKE7;B4DZR0;O95757;E9PDE8;B4DXT2;D6RJ96;B3KNM0 HSPA4L Heat shock 70 kDa protein 4L yes no 0 0 0 7.5 0.5 1 1 36.742 36.769 2 0.0023502 8165 20230619_1888_Aki_TMTPro18x_K_F8 128.12 88.458 86547 60440 80627 100030 77090 67692 63542 64506 73291 76967 76760 68237 83636 62185 71767 66322 90962 63433 79909 55678 82406 97258 79887 70849 65227 66533 74319 76849 78828 69460 84530 64613 74199 66452 86656 60381 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38809000 25451 1249 23891 47762;47763 38498;38499 38499 2 9606 Homo sapiens 0.05264303129001746 SQIYGSR Unmodified 809.40317 0.40316629 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 6.5 1.12 1 1 1 1 32.863 32.915 2 0.021983 6660 20230619_1888_Aki_TMTPro18x_K_F8 102.51 64.38 96827 57050 142090 145290 184900 206900 163300 179280 155420 70079 119020 107600 91729 83024 212090 48544 108260 79660 89723 52978 141250 140080 187930 203680 165710 182090 156990 77935 122820 106760 100140 84620 206890 51634 104390 75436 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 101880000 25452 150 23892 47764;47765;47766;47767 38500;38501 38501 2 9606 Homo sapiens -0.00915916859241861 SQKEEDEQEDLTK Unmodified 1577.7057 0.70567506 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 1 2 0 1 39.897 39.967 3 1.3188E-07 9827 20230619_1881_Aki_TMTPro18x_K_F2 145.71 110.05 52395 29934 54067 51851 58610 65928 46717 56979 64681 64105 85145 81682 70163 68771 67014 41600 81930 76632 48369 27620 54825 50717 60244 65355 48418 58989 65665 64944 85700 81619 71989 69932 68875 44301 78209 72434 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105570000 25453 4016 23893 47768 38502 38502 1 9606 Homo sapiens -0.06006955282668969 SQKPEAGGCGAPAAR Unmodified 1455.6889 0.68885998 376 A0A024R637;O60343-2;O60343-3;O60343 TBC1D4 TBC1 domain family member 4 yes no 0 0 1 6.5 0.5 1 1 31.394 31.459 3 0.032301 5886 20230619_1887_Aki_TMTPro18x_K_F7 52.527 46.517 10738 5730 16165 13079 22904 24625 16162 22791 18622 13615 21350 24783 20736 23864 22332 11099 25135 20631 9949.4 5312.5 16050 12747 23060 23963 16787 23136 18922 14598 21779 24600 21301 23948 22768 11938 23991 19511 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18124000 25454 376 23894 47769;47770 38503 38503 1 9606 Homo sapiens -0.020756898589525008 SQKQEEENPAEETGEEK Acetyl (Protein N-term) 2002.8603 0.8603378 1982 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-8 ENSA Alpha-endosulfine yes no 1 0 1 1 0 1 40.023 40.023 3 1.2111E-38 10071 20230619_1880_Aki_TMTPro18x_K_F1 74.428 65.779 82403 61721 84255 73441 94917 85740 102720 95025 89342 89750 108170 70419 82006 54254 106730 39504 54221 27326 76170 56627 85517 73423 97739 86035 102710 96280 92488 90357 108760 71849 85496 55787 104820 39509 52200 26182 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 229600000 25455 1982 23895 47771 38504 38504 1 9606 Homo sapiens -0.10097795658725772 SQLAAAAR Unmodified 786.4348 0.43480077 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 7.5 0.5 1 1 32.842 32.886 2 0.009171 6477 20230619_1887_Aki_TMTPro18x_K_F7 102.51 22.285 37372 19368 45967 42067 83985 91157 54290 70262 72259 8320.5 13621 16677 8272.3 7253.2 36203 7470.7 19274 12127 34544 17944 46522 41206 83431 87899 57006 71480 70077 12097 16577 16269 9960.7 7801.6 35224 7856.8 18556 11495 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44189000 25456 1292 23896 47772;47773 38505 38505 1 9606 Homo sapiens 0.03304075894698144 SQLDIIIHSLK Unmodified 1265.7343 0.73433683 3444 P13010;Q53TC2 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 2 0 1 61.178 61.189 3 0.0053564 19132 20230619_1881_Aki_TMTPro18x_K_F2 62.14 41.811 253290 232440 145510 182430 166440 186480 183040 293000 183900 322630 288150 183560 374610 278180 196790 371390 324460 529740 233570 212390 157300 188750 171960 190910 183970 292200 192160 319900 293570 196460 370910 289460 211320 379860 310620 500720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3991499999.9999995 25457 3444 23897 47774 38506 38506 1 9606 Homo sapiens 0.11209903665758247 SQLDINNKK Unmodified 1058.572 0.57202253 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;O00429-7;H0YI79;A0A994J6A0;A0A994J3G1;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 1 4.5 3.5 1 1 41.145 41.137 3 0.0059444 10566 20230619_1880_Aki_TMTPro18x_K_F1 88.596 62.082 34401 19922 47257 49771 50136 59691 48617 50727 58625 44852 65755 70819 62043 53908 62343 48387 74253 77426 31850 18494 47000 47872 51819 59328 49443 52299 59364 46456 67005 70120 63467 55895 63965 50383 70951 73220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30653000 25458 3212;3213 23898 47775;47776 38507;38508 38507 2 9606 Homo sapiens 0.04507939983614051 SQLDLFDDVGTFASGPPK Unmodified 1892.9156 0.91560825 1020 Q8N6H7;G5E9L0;A0A0D9SF70;E9PN48;E9PQP3;B4E327;H0YDN9;Q8N6H7-3;Q8N6H7-2 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 0 0 0 6 0 1 63.535 63.584 3 2.1529E-09 19704 20230619_1886_Aki_TMTPro18x_K_F6 124.26 105.43 34159 25084 31327 37071 31297 38318 36497 40769 43641 39290 42460 36712 40846 34454 38680 41073 42232 44137 31544 23069 32099 36453 32695 38683 36730 41428 43989 39712 43509 37340 41637 35977 39581 41333 40386 41882 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205010000 25459 1020 23899 47777 38509 38509 1 9606 Homo sapiens 0.0048670739029148535 SQLEGLEESVR Unmodified 1245.6201 0.62009493 3230 O15031;Q3LIB1 PLXNB2;Nbla00445 Plexin-B2 yes no 0 0 0 2 0 1 49.17 49.235 2 0.00012617 14093 20230619_1881_Aki_TMTPro18x_K_F2 150.33 117.85 63040 48749 52847 66613 52902 67134 58983 62072 77162 82949 96719 96852 89546 86640 79948 97623 92858 108290 58193 44784 54623 65775 55236 67701 59708 64332 78356 83136 97981 97354 91233 90249 82284 98472 88828 102690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108090000 25460 3230 23900 47778 38510 38510 1 9606 Homo sapiens 0.007109691129926432 SQLELLISPTCSCK Unmodified 1634.8008 0.80077819 3001 G1UI16;Q29RF7;Q29RF7-3 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 0 1 0 1 60.093 60.093 3 4.0737E-05 18579 20230619_1880_Aki_TMTPro18x_K_F1 88.73 70.591 32981 27608 34313 35564 37314 36383 36639 34746 43005 30587 32095 30253 38196 30082 35566 35998 35352 33592 30511 25339 34790 35273 38467 36702 37174 35513 42989 31156 33703 30746 38651 31358 36201 35947 33814 31937 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85526000 25461 3001 23901 47779 38511 38511 1 9606 Homo sapiens 0.00876983383204788 SQLETSLK Unmodified 904.48656 0.48656157 3062 H3BLU7;V9HWA2;O43488;B4DZX4;H7C5H7;Q8NHP1;Q8NHP1-3 AKR7A2;HEL-S-166mP;AKR7L Aflatoxin B1 aldehyde reductase member 2;Aflatoxin B1 aldehyde reductase member 4 yes no 0 0 0 6 0 1 44.959 45.048 2 0.00054272 11720 20230619_1886_Aki_TMTPro18x_K_F6 171.36 68.641 162380 120770 140920 147060 179180 194820 178950 178980 237680 181680 223860 239620 203430 197340 201070 177600 256310 244240 149900 110830 145560 146980 183210 193020 182220 184000 238010 185350 229540 239070 208380 203860 207400 182620 244620 231320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196580000 25462 3062 23902 47780 38512 38512 1 9606 Homo sapiens 0.0304977479796662 SQLLGSAHEVQR Unmodified 1323.6895 0.6895119 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 6.5 0.5 1 1 36.793 36.86 3 3.2305E-07 8292 20230619_1886_Aki_TMTPro18x_K_F6 157.22 128.53 31375 22890 39786 36114 45806 48211 42258 40908 42256 34317 40125 33833 30013 24268 40307 25930 38932 35363 29056 21069 39782 35530 46957 47650 42823 42117 42935 35030 40806 34053 31431 25461 40648 26604 37239 33501 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48880000 25463 1022;3868 23903 47781;47782 38513 38513 1 9606 Homo sapiens 0.040614728523905796 SQLLQYVYNLVPR Unmodified 1591.8722 0.8722273 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57;A0A3B3ITP6;A0A3B3IRR8 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 8 0 1 65.55 65.57 3 1.1765E-15 20166 20230619_1888_Aki_TMTPro18x_K_F8 203.39 175.07 11014 9587.2 10361 12204 10942 12350 11521 12583 10844 14282 13732 14035 12593 14540 16379 14061 11445 10342 10183 8796.8 10599 12109 11335 12481 11570 12882 11217 14328 13916 14272 13087 14932 16304 13943 10991 9866.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69864000 25464 471 23904 47783 38514 38514 1 9606 Homo sapiens 0.09996607194352691 SQLLSYIDR Unmodified 1093.5768 0.57677356 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 8 0 1 56.153 56.21 2 2.5819E-05 16205 20230619_1888_Aki_TMTPro18x_K_F8 167.69 94.445 335860 279270 296590 306400 257250 355660 307380 315430 359470 197740 168930 129940 150210 122750 247940 170860 164290 118430 310290 255920 304090 307940 272410 354850 308620 321860 355170 204410 181440 134980 158530 129400 245350 168260 157680 113210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 264680000 25465 1091 23905 47784 38515 38515 1 9606 Homo sapiens 0.03372824126358864 SQLNCLLLSGR Unmodified 1259.6656 0.66560534 2945 E9PS41;Q6RFH5 WDR74 WD repeat-containing protein 74 yes no 0 0 0 4 0 1 54.397 54.413 2 0.00077553 15991 20230619_1883_Aki_TMTPro18x_K_F4 128.88 99.731 82731 67702 81116 79359 69910 88595 79094 82430 102480 60183 54867 51417 57899 50304 72857 67161 66067 50374 76486 62084 82363 79332 73883 88720 79945 84038 101060 61839 58684 52614 59738 52794 73410 66309 63169 48081 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144710000 25466 2945 23906 47785 38516 38516 1 9606 Homo sapiens 0.046159160943716415 SQLNSQSVEITK Unmodified 1332.6885 0.68850885 3285 O60763;O60763-2 USO1 General vesicular transport factor p115 yes no 0 0 0 6 0 1 45.885 45.971 3 0.0013229 12134 20230619_1886_Aki_TMTPro18x_K_F6 84.892 67.566 80701 62834 71146 72820 94941 91045 90201 88828 102470 92211 105640 91063 101000 71763 100390 103270 101950 94501 74526 57624 73422 72980 96529 90678 91592 90969 103800 92982 107950 91930 103100 76383 102190 102780 97478 89878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193960000 25467 3285 23907 47786 38517 38517 1 9606 Homo sapiens 0.03547213692831974 SQLQRPPEAR Unmodified 1180.6313 0.63126874 1677 A0A7I2YQ75;Q9NVE5;Q9NVE5-3;B4DN96 USP40 Ubiquitin carboxyl-terminal hydrolase 40 yes no 0 0 1 7 0 1 29.743 29.85 3 0.017814 5363 20230619_1887_Aki_TMTPro18x_K_F7 71.221 43.696 13013 9577.1 12148 16170 21032 18061 17168 17818 20086 13145 18718 18835 18224 16484 16645 15998 20500 18625 12018 8823 12565 15797 21003 18117 17619 18097 20217 13720 19248 18791 18551 17050 17161 16236 19564 17669 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6253000 25468 1677 23908 47787 38518 38518 1 9606 Homo sapiens 0.04817835997801012 SQLSCVVVDDIER Unmodified 1518.7348 0.73480712 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;A0A994J5C5;A0A994J855;Q96D47;D3DXJ4;I3L2G1;A0A0J9YXN6 NSF Vesicle-fusing ATPase yes no 0 0 0 3 0 1 55.242 55.283 2 2.5228E-12 16463 20230619_1882_Aki_TMTPro18x_K_F3 168.76 127.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25469 1435 23909 47788 38519 38519 1 9606 Homo sapiens -0.0038108946737338556 SQLVYQSR Unmodified 979.50869 0.50869399 1081 A0A0S2Z3Y1;Q08380;B4DVE1;B4DI70;B3KP88;B4DDG4;B4DWA8 LGALS3BP Galectin-3-binding protein yes no 0 0 0 8 0 1 37.567 37.552 2 0.010019 8535 20230619_1888_Aki_TMTPro18x_K_F8 100.02 68.788 24555 17145 21968 22065 25024 30916 27729 28914 41687 16399 23930 22006 16555 17535 21954 18419 34713 19889 22664 15747 22584 21995 25882 30527 28215 29335 40861 17465 25056 21955 17440 18262 22907 18592 32987 18930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35300000 25470 1081 23910 47789 38520 38520 1 9606 Homo sapiens 0.01811999266374187 SQMDGLIPGVEPR Unmodified 1397.6973 0.6972994 4712 Q9Y2X3;B3KN82;B4DUY3 NOP58 Nucleolar protein 58 yes no 0 0 0 5 0 1 54.405 54.472 2 8.575E-06 15623 20230619_1885_Aki_TMTPro18x_K_F5 136.38 68.479 106050 92056 96452 107680 85577 99391 105960 101820 103470 127910 109560 128350 138610 117480 115600 144370 133910 157080 98023 84397 98688 107370 90330 101210 105610 104590 105970 127830 113530 129850 139470 123000 119130 145270 128110 148980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178410000 25471 4712 23911 47790 38521 38521 1 9606 Homo sapiens 0.014358640576801918 SQMESMLISGYALNCVVGSQGMPK Unmodified 2586.195 0.19503605 3470 P17987;E7ERF2;E7EQR6 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 3 0 1 63.936 63.967 3 7.1004E-07 20106 20230619_1882_Aki_TMTPro18x_K_F3 96.679 84.002 62287 45222 57661 66105 53756 69986 64761 57148 60266 81043 71556 68273 88726 71053 68078 83958 81886 88474 57519 41587 58966 65050 56513 70140 64529 59936 62225 80223 73606 69986 89000 73934 70439 84366 78260 83961 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123170000 25472 3470 23912 47791 38522 38522 1 9606 Homo sapiens -0.03461366428382462 SQNEAVCEGLR Unmodified 1261.5721 0.57209888 708 A0A024RC67;O43663-3;O43663-2;O43663-4;O43663 PRC1 Protein regulator of cytokinesis 1 yes no 0 0 0 2 0 1 36.433 36.491 2 1.3043E-08 8297 20230619_1881_Aki_TMTPro18x_K_F2 180.19 164.04 62160 47211 61968 60703 44374 62954 55327 52282 69759 81523 86878 67180 97166 76909 53960 95138 79571 65886 57450 43346 62702 60222 47912 63214 55638 54941 70976 80409 88574 69276 96752 79971 57268 93565 75791 62939 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56768000 25473 708 23913 47792 38523;38524 38524 2 9606 Homo sapiens -0.04822428078705343 SQNIVTDSSSLSAEAIR Unmodified 1776.8854 0.88537076 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 4.5 0.5 1 1 50.527 50.58 2;3 2.6954000000000003E-84 13992 20230619_1885_Aki_TMTPro18x_K_F5 410.88 372.89 161690 132530 144760 157090 158930 191650 182850 174480 226110 196920 196810 199710 219370 184500 187960 232030 218480 226290 149380 121540 148780 157080 164830 190750 184250 180030 226680 198000 204290 202150 221710 193340 193610 231950 208800 214960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 595290000 25474 2337;3778;3779 23914 47793;47794 38525;38526 38526 2 9606 Homo sapiens 0.02800348725168078 SQNKPEDEADEWAR Unmodified 1673.7281 0.72814183 1113 B4DND5;A0A8I5KX76;O75112;V5T7C5;B4DGP4;A0A0S2Z501;O75112-5;C9JWU6;O75112-7;O75112-4;B4DUL3;A0A0S2Z530;O75112-6;O75112-2;A0A8I5KV04;A0A8I5QJN0 LDB3;OPN4 LIM domain-binding protein 3 yes no 0 0 1 2 0 1 41.071 41.148 3 0.092735 10360 20230619_1881_Aki_TMTPro18x_K_F2 40.52 29.885 45343 41708 52799 68772 77445 79400 61694 66617 72476 71563 79985 80675 81663 74290 67409 84045 94846 79178 42017 38380 53472 67289 78015 79168 63470 69069 73553 72352 81772 81287 82674 77320 70395 83990 90374 75313 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42986000 25475 1113 23915 47795 38527 38527 1 9606 Homo sapiens -0.08177311094391371 SQNQQYLVR Unmodified 1134.5782 0.57817054 3232 O15066;B4DYF2;F8WAR6;F8WER6;B7ZM25;I6L9B9;Q7Z2W5;A2RU78;O14782 KIF3B;KIF3C;DKFZp686G1646 Kinesin-like protein KIF3B;Kinesin-like protein KIF3B, N-terminally processed;Kinesin-like protein;Kinesin-like protein KIF3C yes no 0 0 0 7.5 0.5 1 1 36.52 36.547 2 0.00070722 8092 20230619_1888_Aki_TMTPro18x_K_F8 126.24 92.727 28904 22576 20494 26414 38622 44134 35654 34345 52948 11753 13353 11419 10673 11293 23079 15110 16543 11585 26655 20706 21835 26577 38668 43046 36593 35152 51245 13173 15455 11641 11601 11839 22843 14953 15857 11059 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16084000 25476 3232 23916 47796;47797 38528 38528 1 9606 Homo sapiens 0.016264582151279683 SQNRPQGQSTQPSNAAGTNTTSASTPR Unmodified 2743.287 0.28697392 2630 Q9UHD9;B4DZF1 UBQLN2 Ubiquilin-2 yes no 0 0 1 1 0 1 28.28 28.28 4 2.1007E-13 5308 20230619_1880_Aki_TMTPro18x_K_F1 128.17 121.06 2256.7 0 2368.5 2208.2 2376.2 3291 1458.6 3291.3 5043.7 1206.4 2410.3 2732.6 2699.8 2146 2279.2 3404.7 1602.9 2970.1 2074.5 0 2395.4 2058.2 2456.6 3237.4 1638 3301.1 4815.7 1384.6 2609.5 2690.6 2725.6 2297.9 2294.8 3373.1 1549.6 2820.6 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8130000 25477 2630 23917 47798 38529 38529 1 9606 Homo sapiens -0.014938091701424128 SQNTVFCGR Unmodified 1067.4818 0.48182731 4349 Q96FV9;Q96FV9-2;J3KT14 THOC1 THO complex subunit 1 yes no 0 0 0 8 0 1 36.63 36.616 2 0.00015773 8138 20230619_1888_Aki_TMTPro18x_K_F8 146.23 120.34 41208 31489 39828 36083 47239 42095 49865 44124 51267 45892 48453 47726 51513 39178 34243 51678 63047 47463 38077 28877 40655 36167 48464 42192 50152 44992 52032 46344 49953 48092 51659 41369 36802 51442 59937 45182 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34558000 25478 4349 23918 47799 38530 38530 1 9606 Homo sapiens -0.04921432616447419 SQNVMAAASIANIVK Oxidation (M) 1531.8028 0.8028271 3470 P17987;E7ERF2;F5GZI8;F5GYL4 TCP1 T-complex protein 1 subunit alpha yes no 0 1 0 2.5 0.5 1 1 55.705 55.735 3 3.7886E-14 16853 20230619_1881_Aki_TMTPro18x_K_F2 177.74 147.94 85375 66801 75341 92597 90977 84999 86856 90086 100860 86139 103880 88999 96365 82563 102480 103120 95371 98504 78846 61375 77683 91260 93069 86669 88264 91595 102020 87375 106030 90108 98870 86456 103720 103040 91340 93597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1183100000 25479 3470 23919 47800;47801 38531 38531 2114 1 9606 Homo sapiens 0.058197801832875484 SQNVMAAASIANIVK Unmodified 1515.8079 0.80791248 3470 P17987;E7ERF2;F5GZI8;F5GYL4 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 3.67 0.471 1 2 60.553 60.565 2;3 1.0288000000000001E-41 18653 20230619_1882_Aki_TMTPro18x_K_F3 297.91 266.83 214110 182810 212870 228370 172040 226260 239400 223030 235080 255740 242240 242630 263440 217540 254680 281360 264830 279480 198020 167720 215890 226870 183950 228800 237380 229020 240140 256260 249200 246090 267740 228660 259840 281530 253390 265410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 360080000 25480 3470 23919 47802;47803;47804 38532;38533 38532 2 9606 Homo sapiens 0.07064084045919117 SQNWEMAIK Unmodified 1105.5226 0.5226295 2866 Q6FGM6;E5KN59;E5KN55;Q08752 PPID Peptidyl-prolyl cis-trans isomerase D yes no 0 0 0 7 0 1 53.18 53.25 2 2.6927E-05 15023 20230619_1887_Aki_TMTPro18x_K_F7 144.77 96.947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25481 2866 23920 47805 38534 38534 1 9606 Homo sapiens -0.025910912968583943 SQPAILLLTAAR Unmodified 1252.7503 0.75032125 955 A0A0A0MSK5;Q5JTV8;Q5JTV8-3;J3KN66;H0Y4R4 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 0 0 0 5 0 1 60.079 60.131 3 0.00018881 18003 20230619_1885_Aki_TMTPro18x_K_F5 99.404 85.825 17555 12860 16659 15136 19530 18818 17491 16989 20332 17221 18189 16490 16741 13558 18578 17830 18994 21389 16215 11798 17026 15153 19988 18717 17843 17487 20462 17376 18693 16683 17216 14319 18879 18048 18186 20269 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154190000 25482 955 23921 47806 38535 38535 1 9606 Homo sapiens 0.13405609902679316 SQPAPAEFR Unmodified 1001.493 0.49304393 1209 A0A140VJX3;P25325;P25325-2;Q2VEU1;B1AH49;Q59HD5 MPST 3-mercaptopyruvate sulfurtransferase;Sulfurtransferase yes no 0 0 0 4 0.816 1 1 1 36.956 37.02 2 0.0014617 8285 20230619_1883_Aki_TMTPro18x_K_F4 128.27 77.663 176200 143060 165030 163890 210050 218700 196790 183480 234120 213420 241840 222820 228510 188170 215720 252730 270140 231460 162840 131160 169230 164540 214230 216250 200310 190680 236650 214450 247050 224750 233060 198650 222780 251640 257670 220200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 376460000 25483 1209 23922 47807;47808;47809 38536;38537;38538 38537 3 9606 Homo sapiens -0.007642872506721687 SQPDMAIMAVNTFVK Unmodified 1650.8109 0.81094895 3819 Q10567-4;Q10567-3;Q10567-2;Q10567;C9J1E7 AP1B1 AP-1 complex subunit beta-1 yes no 0 0 0 2 0 1 62.886 62.895 3 5.6489E-06 19931 20230619_1881_Aki_TMTPro18x_K_F2 116.86 103.88 67726 61215 66402 57665 53692 63134 53037 68753 70453 75775 74886 74117 92489 68839 66492 79696 95131 86366 62655 56010 67307 58682 56828 63590 54144 69978 71025 76133 77355 75143 92558 71823 69715 80247 90683 81992 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 191140000 25484 3819 23923 47810 38539;38540 38539 2 9606 Homo sapiens 0.011575911083809842 SQPELIEAHTCER Unmodified 1568.7253 0.72530506 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;A0A804HI02;A0A804HJU6;A0A0J9YVR1;A0A0J9YWI5 TBCD Tubulin-specific chaperone D yes no 0 0 0 2 0.816 1 1 1 36.829 36.866 3 9.1839E-46 8425 20230619_1881_Aki_TMTPro18x_K_F2 295.29 239.2 30986 24737 31720 30865 28882 31097 33783 32110 38213 35104 41571 44859 40587 35807 40028 38115 48696 40601 28653 22700 32113 30680 30350 31455 33924 32827 38792 35613 42478 44775 41445 37345 41175 38417 46452 38566 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 211160000 25485 1722 23924 47811;47812;47813 38541 38541 1 9606 Homo sapiens -0.03630857752909833 SQPEPLVVK Unmodified 995.56515 0.56514624 3841 V9HWG1;Q13228-3;Q13228;Q13228-4;B4DPI7;Q13228-2 HEL-S-134P;SELENBP1 Selenium-binding protein 1 yes no 0 0 0 6 0 1 46.295 46.378 3 0.0094392 12296 20230619_1886_Aki_TMTPro18x_K_F6 69.979 35.447 61489 50131 58712 61939 79261 83701 85956 77254 110750 81210 89284 92056 87897 83073 87905 95443 99298 93695 56835 45995 60215 61864 80890 82844 86971 79479 110460 82271 92581 92670 89834 86592 90056 95603 94859 89031 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79829000 25486 3841 23925 47814 38542 38542 1 9606 Homo sapiens 0.06718627103055042 SQPERDWVLNEFR Unmodified 1674.8114 0.81141795 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7;A0A0U1RQJ0 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 1 5 1 1 1 52.255 52.306 3 9.5071E-05 14878 20230619_1886_Aki_TMTPro18x_K_F6 107.74 82.145 180200 157990 171050 175620 168830 192440 186960 187130 213700 182520 194920 190140 209750 171670 208540 205200 205070 210040 166630 144770 174520 176200 176110 193230 188310 191420 215360 185000 201530 192130 213490 179510 211870 205960 196280 199430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 200690000 25487 1328 23926 47815;47816 38543;38544 38544 2 9606 Homo sapiens 0.00100470144116116 SQPNIPK Unmodified 782.42865 0.42865276 338 Q9UBM7;A0A804HJQ7;A8K0D2;A0A1Y1B909;X5DNI9;A0A024R5F7;A0A804HI25;A0A8I5KRR9;E9PJ54;A0A0S2Z3N8;E9PIP9;E9PQ71;X5D9E1;E9PRL8;A0A0S2Z3S3;X5DRD7;A0A804HJI8;A0A804HL56;A0A0S2Z3U5 DHCR7 7-dehydrocholesterol reductase yes no 0 0 0 7.5 0.5 1 1 39.471 39.497 2 0.0057323 9223 20230619_1888_Aki_TMTPro18x_K_F8 138.55 75.262 55532 37088 74582 71519 76944 86999 64396 77693 72627 60860 91194 88509 87725 78841 77193 65456 104660 91869 51436 34249 74184 69546 79374 86513 66009 79543 74196 63267 92509 88289 89184 80940 80119 67522 99787 87024 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51898000 25488 338 23927 47817;47818 38545 38545 1 9606 Homo sapiens 0.028735576631902404 SQPQQLHQGQYR Unmodified 1468.7171 0.71712364 35 A0A024QZE0;Q9H7E2-2;Q9H7E2;Q9H7E2-3 TDRD3 Tudor domain-containing protein 3 yes no 0 0 0 8 0 1 29.204 29.224 3 0.00029151 5383 20230619_1888_Aki_TMTPro18x_K_F8 96.103 71.311 1904.5 1958.2 3569.2 3418.6 1503.4 2494 2377.2 3080.1 2780.7 3280.9 3230.6 2624.9 3453.1 2523.8 2487.2 2846.1 3151.4 2395.3 1776.6 1802.7 3455.9 3319.5 1751 2601.5 2364.8 3110.7 2829.6 3283 3297.6 2692.4 3468.4 2625.7 2584.4 2829.2 3003.5 2282.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4535600 25489 35 23928 47819 38546 38546 1 9606 Homo sapiens 0.0015137611264890438 SQPSSSVPSSYIR Unmodified 1393.6838 0.68375782 4482 Q9C0D5-2;Q9C0D5 TANC1 Protein TANC1 yes no 0 0 0 8 0 1 41.289 41.286 2 0.0025524 10001 20230619_1888_Aki_TMTPro18x_K_F8 110.39 82.374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25490 4482 23929 47820 38547 38547 1 9606 Homo sapiens 0.0026632955011791637 SQQALVQK Unmodified 900.50288 0.50288033 2057 Q5QNZ2;Q08ET0;A8K4W2;P24539;Q53GB3 ATP5F1;hCG_39985 ATP synthase F(0) complex subunit B1, mitochondrial yes no 0 0 0 8 0 1 39.713 39.702 2 2.37E-07 9357 20230619_1888_Aki_TMTPro18x_K_F8 236.09 107.6 61282 28919 77642 76412 110780 119560 82020 115500 102710 55608 98953 113200 79219 81289 97426 42919 116780 95862 56641 26909 77990 73741 111640 117400 85102 116560 103110 61194 100970 111150 82458 82843 99495 46906 111400 90566 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56690000 25491 2057 23930 47821 38548 38548 1 9606 Homo sapiens 0.048649007547169276 SQQEICEQLNINHMIQR Oxidation (M) 2156.0103 0.01027047 2509 B4DK32;Q14139;Q14139-2;Q05BZ7 UBE4A Ubiquitin conjugation factor E4 A yes no 0 1 0 5 0 1 44.717 44.795 3 0.027371 11546 20230619_1885_Aki_TMTPro18x_K_F5 53.255 44.655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25492 2509 23931 47822 38549 38549 1535 1 9606 Homo sapiens -0.021494254016033665 SQQPLKPQVHTPVATVK Unmodified 1857.0472 0.047231549 1151 A0A0U1RQQ9;Q6P3W7 SCYL2 SCY1-like protein 2 yes no 0 0 1 4 0 1 42.526 42.57 4 6.3171E-05 10660 20230619_1883_Aki_TMTPro18x_K_F4 95.666 79.172 64929 52233 64382 69956 76428 85650 80143 87319 92731 78862 96467 96274 90584 70761 80998 76083 91521 96583 60027 47967 65671 69389 78553 85431 80996 88833 93837 80678 98528 96070 92137 74164 83086 77538 87500 91499 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34153000 25493 1151 23932 47823 38550 38550 1 9606 Homo sapiens 0.15298982268723194 SQQQDDIEELETK Unmodified 1561.7108 0.71076044 2828 Q9H4A3-7;Q9H4A3;D3DUP1;F5GWT4;D3DUP2;Q9H4A3-6;Q9H4A3-2;Q9H4A3-5;F6UYG0 WNK1 Serine/threonine-protein kinase WNK1 yes no 0 0 0 1 0 1 49.678 49.678 3 1.6427E-15 14220 20230619_1880_Aki_TMTPro18x_K_F1 197.36 170.82 68460 56505 51826 61903 60020 68310 68573 61386 71103 89549 85889 89686 83769 67382 74936 91442 91840 96615 63179 51782 54221 62160 61974 68453 68710 63962 72970 88954 87355 90247 85126 71545 77382 91738 87742 91694 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132480000 25494 2828 23933 47824 38551 38551 1 9606 Homo sapiens -0.047626514200374004 SQQQFLIHQQSGEQK Unmodified 1784.8806 0.88056015 4264 Q8TB46;Q9ULJ7-2;Q9ULJ7 ANKRD50 Ankyrin repeat domain-containing protein 50 yes no 0 0 0 7 0 1 40.512 40.58 3 5.3812E-06 9491 20230619_1887_Aki_TMTPro18x_K_F7 117.08 98.248 14075 11721 16147 16904 17459 15521 16490 16161 17928 17289 19069 16559 15008 14981 17848 18753 20863 19150 13032 10772 16249 16624 17969 15822 16734 16501 18226 17390 19322 16803 15600 15697 18270 18804 19920 18191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13075000 25495 4264 23934 47825 38552 38552 1 9606 Homo sapiens 0.01951509373020599 SQRDPLAADESAPQR Unmodified 1639.7914 0.79141079 4353 Q96GA3;B4DTT8 LTV1 Protein LTV1 homolog yes no 0 0 1 2 0 1 33.987 34.044 3 9.7437E-11 7306 20230619_1881_Aki_TMTPro18x_K_F2 161.08 136.89 19888 17290 20598 15809 16605 19969 18257 22220 21025 18770 23612 19804 24864 17356 21031 26253 25764 19620 18403 15819 20776 16172 17623 19935 18424 22433 21353 19182 24130 20013 25132 18460 21741 25853 24562 18728 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25069000 25496 4353 23935 47826 38553 38553 1 9606 Homo sapiens -0.0028932558648193663 SQREDEEEEEGENYQK Unmodified 1997.8086 0.80863658 2218 B2R5M3;P05060;B4DEA7;A0A0A0MT66 CHGB Secretogranin-1;PE-11;GAWK peptide;CCB peptide yes no 0 0 1 1 0 1 35.176 35.176 3 5.074099999999999E-19 8049 20230619_1880_Aki_TMTPro18x_K_F1 195.66 181.62 55233 45785 60330 135790 51477 21820 117780 126360 107150 75300 75066 54193 79741 59565 33301 67707 73799 50181 51115 42596 61197 128050 55565 33028 114510 120600 108320 78116 78534 56276 79020 61730 37095 66836 70055 47935 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47012000 25497 2218 23936 47827 38554 38554 1 9606 Homo sapiens -0.15035539352629712 SQRPEESEPLEK Unmodified 1427.6892 0.68923713 2018 A8K2Z3;Q5TFE4;Q5TFE4-2 NT5DC1 5'-nucleotidase domain-containing protein 1 yes no 0 0 1 2.5 0.5 1 1 36.319 36.376 3 1.0938E-07 8213 20230619_1881_Aki_TMTPro18x_K_F2 167.03 120.87 231090 171230 200090 194560 248780 265280 215060 206930 288520 291420 300280 288330 342910 261760 232320 361950 379620 336440 213320 157040 206490 195520 253810 261630 221080 217650 290410 290010 309140 292110 343320 276310 247010 360270 361490 319980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127920000 25498 2018 23937 47828;47829 38555;38556 38555 2 9606 Homo sapiens -0.007499916580854915 SQSAAVTPSSTTSSTR Unmodified 1566.7485 0.74854293 3948 Q16186;Q68E00;A0A087WX59 ADRM1;DKFZp686G2045 Proteasomal ubiquitin receptor ADRM1 yes no 0 0 0 5.8 0.748 2 2 1 31.14 31.204 2;3 8.8321E-12 5761 20230619_1887_Aki_TMTPro18x_K_F7 133.86 118.28 16791 6238 22826 22376 33426 44672 31546 37973 35857 21096 31171 39365 34093 31351 30439 12649 36083 35815 15519 5822.3 22858 21523 33878 43255 32054 38770 36042 22803 32387 38808 34547 31627 31224 14374 34468 33773 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 167330000 25499 3948 23938 47830;47831;47832;47833;47834 38557;38558;38559 38559 3 9606 Homo sapiens -0.012161404345988558 SQSAEIWEK Unmodified 1076.5138 0.51383895 4153 Q7L4I2-2;Q7L4I2;B3KMH4 RSRC2;FLJ11021 Arginine/serine-rich coiled-coil protein 2 yes no 0 0 0 4 0 1 48.41 48.451 3 0.083487 13252 20230619_1883_Aki_TMTPro18x_K_F4 41.824 19.626 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25500 4153 23939 47835 38560 38560 1 9606 Homo sapiens -0.021357416616638147 SQSAFDLK Unmodified 894.4447 0.44469675 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 6.5 0.5 1 1 47.92 48.003 2 0.0027662 12655 20230619_1887_Aki_TMTPro18x_K_F7 131.62 83.799 168110 129910 135210 160760 157790 190180 170570 162370 214040 190020 217340 209700 234660 189470 185830 237580 260740 227230 155140 119220 140610 160150 162740 189410 172550 168570 215640 191260 223470 211430 236630 198670 194230 237250 248520 216060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128490000 25501 128 23940 47836;47837 38561 38561 1 9606 Homo sapiens -0.006747808905743113 SQSPAASDCSSSSSSASLPSSGR Unmodified 2198.9346 0.93458215 2751 C9JFK9;O95817;Q53GY1 BAG3 BAG family molecular chaperone regulator 3 yes no 0 0 0 4.5 0.5 1 1 35.199 35.267 3 8.4202E-12 7636 20230619_1883_Aki_TMTPro18x_K_F4 117.43 113.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25502 2751 23941 47838;47839 38562;38563 38562 2 9606 Homo sapiens -0.11692775838855596 SQSQLLNTLTK Unmodified 1231.6772 0.67721588 1999 A8K0P8;Q68CQ4 DIEXF Digestive organ expansion factor homolog yes no 0 0 0 2.5 0.5 1 1 53.519 53.56 3 9.7504E-05 15998 20230619_1881_Aki_TMTPro18x_K_F2 120.03 77.007 67521 54940 63082 68962 51553 78611 66189 65165 49952 78490 82315 96516 93491 82543 70354 107140 102570 107600 62399 50416 64339 68603 54987 78394 65445 67879 53212 79100 83508 96683 94004 86878 73931 107180 97863 102180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 252710000 25503 1999 23942 47840;47841 38564 38564 1 9606 Homo sapiens 0.07064436389373441 SQSRPNDIMAEVCR Unmodified 1661.7614 0.76137299 3835 Q13131;Q13131-2 PRKAA1 5'-AMP-activated protein kinase catalytic subunit alpha-1 yes no 0 0 1 6 0 1 41.153 41.247 3 2.0974E-05 10059 20230619_1886_Aki_TMTPro18x_K_F6 115.04 106.22 44157 31850 43474 39851 41970 44653 47647 43965 47416 49464 48393 50715 54759 46516 52409 50781 56572 54764 40796 29240 44174 39666 43842 44779 47712 45116 48385 49730 49913 51272 55575 48355 53552 51195 54075 51979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61412000 25504 3835 23943 47842 38565 38565 1 9606 Homo sapiens -0.04303723847692709 SQSSDTEQQSPTSGGGK Unmodified 1679.7235 0.72345039 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 0 2.5 0.5 1 1 32.56 32.626 3 4.9311E-14 6726 20230619_1881_Aki_TMTPro18x_K_F2 165.45 140.73 13543 9664.2 18276 16431 24000 27667 16801 21349 22233 16581 26376 29564 23845 22843 23049 12583 25718 28288 12549 8905.2 18244 16173 24290 26961 17548 22104 22481 17418 26775 29168 24392 23245 23540 13726 24598 26693 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 16436000 25505 2578 23944 47843;47844 38566;38567;38568 38567 3 9606 Homo sapiens -0.08922240027845874 SQSSSAEQSFLFSR Unmodified 1559.7216 0.72159989 1944 A4D218;Q9Y6D9;Q9Y6D9-4;Q9Y6D9-3 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes no 0 0 0 7 0 1 50.128 50.21 3 0.004536 13676 20230619_1887_Aki_TMTPro18x_K_F7 54.811 46.401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25506 1944 23945 47845 38569 38569 1 9606 Homo sapiens -0.035872042551091 SQTAMSETYDFLFK Acetyl (Protein N-term) 1708.7654 0.76543854 264 Q53GC2;A0A024R3U9;P20338 RAB4A Ras-related protein Rab-4A no no 1 0 0 5 0.816 1 1 1 66.644 66.677 2 2.2734E-17 20836 20230619_1885_Aki_TMTPro18x_K_F5 109.42 103.18 20721 14152 19768 22876 16554 21882 19151 18971 20106 22192 24252 26301 26307 23989 23063 30302 25681 29946 19133 13023 20133 22355 17548 22117 19202 19681 20604 22277 24792 26443 26641 25144 23696 30307 24550 28431 3 2 3 3 3 3 3 3 3 2 3 3 3 3 3 3 2 3 40965000 25507 264 23946 47846;47847;47848 38570;38571 38570 2 9606 Homo sapiens -0.06059355873003369 SQTELPDEK Unmodified 1045.4928 0.49276916 4347 Q99575;Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 0 2 0 1 41.148 41.225 2 9.101E-06 10368 20230619_1881_Aki_TMTPro18x_K_F2 194.94 139.26 40375 24037 51735 55325 55165 67587 47024 58691 57826 51693 74783 78593 69296 63337 65481 33961 81121 70287 37357 22276 51682 53391 56852 67127 48288 60369 58927 53440 75709 77971 70743 64301 67328 36751 77390 66413 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23793000 25508 4347 23947 47849 38572 38572 1 9606 Homo sapiens -0.02815751761181673 SQTGVGELTTQNTR Unmodified 1490.7325 0.73249893 4113 Q6NX51;Q96A65;B7Z321;B7Z689;B7Z502;B3KTF7;B7Z4J9 EXOC4 Exocyst complex component 4 yes no 0 0 0 5 0 1 38.158 38.251 2 8.0413E-09 8812 20230619_1885_Aki_TMTPro18x_K_F5 166.48 130.53 11648 11480 12203 13223 13552 15569 12069 12094 16657 15221 13563 15813 13861 14792 14516 17036 15989 17369 10789 10519 12376 13240 13942 15488 12398 12681 16592 15242 14092 15983 14193 15397 14845 17096 15294 16489 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33884000 25509 4113 23948 47850 38573 38573 1 9606 Homo sapiens 0.006761981191857558 SQTGWPR Unmodified 830.4035 0.40350064 416 B2R6U8;A0A024R6W2;O43809;Q5HYH5 NUDT21;DKFZp313O211 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 0 5.5 2.69 1 1 1 1 36.38 36.408 2 0.053666 8519 20230619_1880_Aki_TMTPro18x_K_F1 84.568 64.286 307240 242620 291860 301800 343310 358780 333950 328410 405330 355860 406420 376190 406990 342250 347090 370330 443400 378530 283910 222640 298560 300670 352250 357840 339470 338330 408780 358940 416680 379940 412570 355670 359410 372140 422860 359680 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 442470000 25510 416 23949 47851;47852;47853;47854 38574;38575 38574 2 9606 Homo sapiens -0.018484971393831984 SQTSSIPQKPQTNK Unmodified 1542.8002 0.80018457 3877 Q14157;Q14157-5;H0Y5H6 UBAP2L Ubiquitin-associated protein 2-like yes no 0 0 1 3 0 1 39.135 39.189 3 0.00016934 9274 20230619_1882_Aki_TMTPro18x_K_F3 95.854 81.647 23391 14289 29854 33378 43687 51550 37625 47260 43803 30990 45712 57527 43667 36659 46187 17382 44639 37685 21645 13244 30026 32332 44135 50590 38500 48110 44295 32997 46811 56401 44736 37492 46669 19022 42677 35604 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31910000 25511 3877 23950 47855 38576 38576 1 9606 Homo sapiens 0.050496480499759855 SQTTGFPSLITIFSAPNYLDVYNNK Unmodified 2789.3912 0.3912112 1092 A0A0S2Z4B5;Q08209;A0A0S2Z4C6;Q08209-2;Q08209-3;E7ETC2;Q08209-5;Q9UMM5;Q5F2F8;P16298-4;P16298-2;P16298-3;P16298;B7Z781 PPP3CA;PPP3CB Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 5 0 1 66.62 66.663 3 3.2863E-14 20824 20230619_1885_Aki_TMTPro18x_K_F5 142.45 126.36 8499.1 6797 7766.7 7671.7 5978.3 7770.9 7859.4 7719.1 7375.2 9280.4 9247 9309.8 9112.6 8861.6 7391.4 12634 9583.6 10533 7852.2 6231.3 7924.3 7680.8 6410.1 7848.6 7805.7 7932.3 7622.7 9292.6 9392.7 9441.7 9232.2 9346.6 7697.5 12501 9154.9 10023 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9188100 25512 1092 23951 47856 38577 38577 1 9606 Homo sapiens 0.0680912460466061 SQTTYYAQCYR Unmodified 1439.614 0.6139637 505 B7ZC39;A0A024R896;B7ZC38;Q9NR46;Q9NR46-2;Q71RA6 SH3GLB2 Endophilin-B2 yes no 0 0 0 8 0 1 39.741 39.73 2 0.00015172 9365 20230619_1888_Aki_TMTPro18x_K_F8 146.11 132.75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25513 505 23952 47857 38578 38578 1 9606 Homo sapiens -0.08825872390184486 SQVEEELFSVR Unmodified 1321.6514 0.65139506 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3 PLEC Plectin yes no 0 0 0 3 0 1 56.453 56.49 3 0.0011231 16975 20230619_1882_Aki_TMTPro18x_K_F3 84.892 67.072 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25514 3921 23953 47858 38579 38579 1 9606 Homo sapiens 0.0034354214706127095 SQVEPADYK Unmodified 1035.4873 0.48728985 3601 P48739;P48739-2;P48739-3;B2R7P6;B3KYB6;B3KYB7 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 0 0 4 0 1 41.695 41.738 2 0.00183 10314 20230619_1883_Aki_TMTPro18x_K_F4 112.13 75.734 44211 26737 39907 40009 42255 56611 48477 51268 68051 56339 72085 91655 88710 71101 58967 61696 101000 116460 40781 24616 40949 39517 43997 55814 49125 52872 68330 57761 74586 90652 88605 73611 62815 65195 96334 109980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41549000 25515 3601 23954 47859 38580 38580 1 9606 Homo sapiens -0.02903430553033104 SQVEPADYKADEDPALFQSVK Unmodified 2336.1172 0.11722119 3601 P48739;P48739-2;P48739-3;B2R7P6;B3KYB6 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 0 1 4.5 0.5 1 1 55.122 55.189 3 9.9259E-08 15939 20230619_1885_Aki_TMTPro18x_K_F5 99.441 86.286 36940 32783 32351 32415 32599 31912 37932 39494 35397 47892 46492 44478 47759 33319 45987 48075 43446 42449 34140 30008 33246 32796 33948 32514 37878 40034 36704 47799 47228 44932 48556 35546 46666 47754 41587 40382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57163000 25516 3601 23955 47860;47861 38581;38582 38582 2 9606 Homo sapiens 0.002607265653750801 SQVFSTAADGQTQVEIK Unmodified 1807.8952 0.89520716 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;B7Z4T3;B7Z1V7;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 5.2 0.748 1 2 2 52.726 52.791 3;4 5.2051E-14 15067 20230619_1886_Aki_TMTPro18x_K_F6 165.2 146.03 188240 154550 171200 172040 154450 183850 182100 197690 222490 231980 226010 242920 273690 233950 212610 295200 264170 287190 173930 141660 175100 172560 162700 185340 183340 201850 224640 232920 233870 245860 274970 244850 220590 294960 252410 272770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6273999999.999999 25517 1488 23956 47862;47863;47864;47865;47866 38583;38584 38584 2 9606 Homo sapiens 0.023575367304829342 SQVKPDSVTASQPPSK Unmodified 1654.8526 0.85261407 4398 Q96T58;A0A994J7B7 SPEN Msx2-interacting protein yes no 0 0 1 8 0 1 40.406 40.398 4 2.9E-05 9678 20230619_1888_Aki_TMTPro18x_K_F8 99.451 81.534 37949 24471 38590 38183 46361 50712 45427 43224 51192 33954 50619 47344 47592 42675 45380 44017 51473 45708 35048 22534 39264 37579 47513 50135 46032 44436 51720 35260 51809 47337 48582 44225 46510 44320 49150 43417 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16430000 25518 4398 23957 47867 38585 38585 1 9606 Homo sapiens 0.05138186392946409 SQVSEEEGKEVESDK Unmodified 1678.7534 0.75335353 3431 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;Q59F12;P11171-5;Q4VB87;A0A994J847;Q29RX4;A0A2R8YCW8;P11171-7;A0A2R8Y5Z6;A0A2R8Y5G2;A0A2R8Y570;A0A3B3IU06;A0A2R8YFR9;A0A2R8Y6G5;A0A3B3IUD6;A0A3B3ITC5;A0A2R8Y6T6;A0A2R8YFU8 EPB41 Protein 4.1 yes no 0 0 1 2 0 1 40.265 40.339 3 0.0051519 9959 20230619_1881_Aki_TMTPro18x_K_F2 67.648 56.603 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25519 3431 23958 47868 38586 38586 1 9606 Homo sapiens -0.0588730108247546 SQVVAGTNYFIK Unmodified 1325.698 0.69795133 3379 Q76LA1;P04080;A0A1W2PS52 CSTB Cystatin-B yes no 0 0 0 3 0 1 55.148 55.189 2 0.021318 16423 20230619_1882_Aki_TMTPro18x_K_F3 80.245 56.215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25520 3379 23959 47869 38587 38587 1 9606 Homo sapiens 0.048130267690112305 SQWLNEK Unmodified 903.44503 0.4450311 1487 P28161;A0A384P5E9;P28161-2;F6XZQ7;Q0D2I8;E9PHN6;A8HT81;E9PHN7;E9PLF1;A0A0A0MR85;X5DNN9;Q03013-3;Q03013;P09488-2;Q03013-2;X5DR03;A0A140VKE3;P46439;Q5T8R2;P09488;E7EWW9;X5D932;A0A3B3IRM5;H3BQT3;B9ZVX7;Q9UE37;Q5T8R1;H3BRM6 GSTM2;GSTM4;GSTM1;GSTM5;GSTmu3 Glutathione S-transferase Mu 2;Glutathione S-transferase Mu 4;Glutathione S-transferase Mu 1;Glutathione S-transferase Mu 5 yes no 0 0 0 6.5 0.5 1 1 47.406 47.49 2 0.025625 12814 20230619_1886_Aki_TMTPro18x_K_F6 97.635 36.953 105150 79575 110850 117060 120570 117050 135520 137860 144900 131520 139660 164370 136280 122920 144720 134440 157410 169370 97225 73171 112310 115130 124710 118830 136070 139240 146840 134210 143600 163860 139660 128770 147660 136900 150570 160450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 341010000 25521 1487 23960 47870;47871 38588 38588 1 9606 Homo sapiens -0.010553611707223354 SQWSPALTISK Unmodified 1216.6452 0.64518747 761;3726 P61077-3;P61077-2;P61077;A0A087WY85;A0A024RDH2;D6RFM0;H9KV45;D6RAH7;D6RAW0;P62837-2;P62837 UBE2D3;UBE2D2 Ubiquitin-conjugating enzyme E2 D3;Ubiquitin-conjugating enzyme E2 D2 no no 0 0 0 3 0 2 55.696 55.737 2;3 0.00021074 16638 20230619_1882_Aki_TMTPro18x_K_F3 143.79 124.03 791060 608770 736020 631360 634180 858440 734690 726450 878050 618650 581860 484200 579430 483160 616960 548440 628030 542850 730780 557770 750240 639230 671080 847590 739440 748170 873850 627600 610340 497980 593330 502100 626890 550050 600200 515980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1446500000 25522 761;3726 23961 47872;47873 38589;38590 38589 2 9606 Homo sapiens 0.04553068706218255 SQWSPALTVSK Unmodified 1202.6295 0.62953741 40 Q9UQL0;A0A087WW00;C9J9H9;A0A024RA90;A0A024QZJ2;Q9Y2X8;P51668 UBE2D4;UBE2D1 Ubiquitin-conjugating enzyme E2 D4;Ubiquitin-conjugating enzyme E2 D1 yes no 0 0 0 3 0 1 53.079 53.138 3 0.00032883 15558 20230619_1882_Aki_TMTPro18x_K_F3 100.19 71.038 84066 71133 89400 87566 87033 112190 94966 95013 118350 98469 93830 96105 101740 83664 92334 101210 105870 94772 77790 65253 90346 87406 90948 111140 96019 98329 118240 99316 97784 97241 103150 87647 94846 101050 101080 90124 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126740000 25523 40 23962 47874 38591 38591 1 9606 Homo sapiens 0.03632782189174577 SQYEQLAEQNR Unmodified 1364.6321 0.6320566 1272 P13645;CON__P13645;A0A1B0GVI3 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 3 0 1 40.585 40.644 2 0.00045916 9897 20230619_1882_Aki_TMTPro18x_K_F3 139.31 123.97 + 26208 17828 31724 36705 225040 45996 35444 46867 54416 30069 47926 46183 40074 86325 50847 25110 48917 45656 24250 16479 34387 35600 211810 46358 47313 47338 54278 31884 49140 47501 42012 84267 51261 27499 46799 43159 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38940000 25524 1272 23963 47875 38592 38592 1 9606 Homo sapiens -0.03567414143822134 SQYEQLAEQNRK Unmodified 1492.727 0.72701962 1272 P13645;CON__P13645;A0A1B0GVI3 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 1 5.33 0.471 2 1 40.096 40.187 3 3.9079E-13 9583 20230619_1886_Aki_TMTPro18x_K_F6 201.48 186.09 + 56702 51369 165860 62624 3812200 162150 138020 150530 259460 42218 115630 153200 85236 765440 134380 40229 146140 115850 53301 47107 207280 60124 3541000 167600 355460 151580 256550 53204 124430 170980 95084 727870 135880 57227 139510 109350 2 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 460600000 25525 1272 23964 47876;47877;47878 38593;38594;38595 38595 3 9606 Homo sapiens 0.00036519327363748744 SRAEAALEEESR Unmodified 1346.6426 0.64262129 156 Q969G3;A0A2U3TZQ7;B4DGM3;A0A2R8Y855;A0A2R8Y4T4;A0A2R8Y7I9;A0A2R8Y7U4;J3QKS7;A0A2R8Y765;A0A024R1S7;Q969G3-5;Q969G3-6;Q969G3-3;Q969G3-2;Q969G3-4;A0A2R8YES3;J3QR61;C0IMW8;A0A2R8YD78;J3KT85 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 0 0 1 1 0 1 34.664 34.664 3 4.7881E-08 7821 20230619_1880_Aki_TMTPro18x_K_F1 138.35 113.02 102850 76014 97304 94589 118100 131240 95496 131330 129540 125090 132760 180350 151490 129510 115660 127400 163360 174630 95001 69775 99583 94503 120510 129910 98770 133870 130230 128380 137150 178630 152360 135180 120930 130670 155920 165320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 370860000 25526 156 23965 47879 38596 38596 1 9606 Homo sapiens -0.016834314893685587 SRAEMYDDVHSDGR Oxidation (M) 1652.6849 0.68489681 458 A8K5G0;A0A024R7K0;M0R2Z9;Q8IX01-4;Q8IX01-3;Q8IX01;M0R3F6;M0R065;M0R216 SFRS14;SUGP2 SURP and G-patch domain-containing protein 2 yes no 0 1 1 1 0 1 27.489 27.489 4 0.0062818 5016 20230619_1880_Aki_TMTPro18x_K_F1 75.764 70.963 4482.9 3019.3 4165.5 5802.4 6498.4 4516.1 5684.3 6757.3 5694.2 6480.7 8112.6 6882.9 7182.5 4646.7 6466.6 6760.3 7268.3 6475.5 4138.2 2787.9 4299.7 5609.7 6521.7 4718.1 5782.4 6738.8 5898.7 6568.9 8159.7 6899.3 7314.7 4984.7 6633.9 6742.7 6941 6156.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10684000 25527 458 23966 47880 38597 38597 282 1 9606 Homo sapiens -0.11533824143339189 SRAEQMASVQNAQR Unmodified 1574.7583 0.75833653 184 Q9UDY2-7;Q9UDY2;A0A1B0GTW1;Q9UDY2-3;A0A3B3ITE1;A0A024R233;A0A2R8YDH4;A0A3B3IRI3;B7Z954;Q9UDY2-6;A0A3B3ISZ5;A0A024R225;B7Z2R3;A0A3B3IU51;A0A3B3ISF1;A0A3B3IRV6;Q9UDY2-2;Q9UDY2-4;Q9UDY2-5;A0A3B3IS03;A0A3B3IT83 TJP2 Tight junction protein ZO-2 yes no 0 0 1 7.5 0.5 1 1 31.058 31.112 3 9.7022E-09 5765 20230619_1887_Aki_TMTPro18x_K_F7 158.89 126.83 15810 9760.5 13750 16118 17855 23099 19036 17515 22978 22113 17007 16609 24637 15525 15684 22244 17704 15473 14580 8996.4 14222 15828 18290 22680 19234 18397 22969 21945 18052 17074 24442 16425 16252 21848 16904 14776 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49248000 25528 184 23967 47881;47882 38598;38599 38598 2 9606 Homo sapiens -0.006052309101733044 SRANEEYGLR Unmodified 1193.5789 0.57889882 184 Q9UDY2-7;Q9UDY2;A0A1B0GTW1;Q9UDY2-3;A0A3B3ITE1;A0A024R233;A0A2R8YDH4;A0A3B3IRI3;B7Z954;Q9UDY2-6;A0A3B3ISZ5;A0A024R225;B7Z2R3;A0A3B3IU51;A0A3B3ISF1;A0A3B3IRV6;Q9UDY2-2;Q9UDY2-4;Q9UDY2-5;A0A3B3IT83 TJP2 Tight junction protein ZO-2 yes no 0 0 1 4 0 1 30.766 30.83 3 0.00081503 5882 20230619_1883_Aki_TMTPro18x_K_F4 96.957 62.424 20023 15392 15229 23433 31101 28554 23340 28397 31290 27809 30313 30558 30878 23894 29299 36664 35428 25683 18471 14159 16150 23048 30822 28484 24227 28986 31391 28220 31173 30693 31415 25530 30197 36005 33771 24546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11902000 25529 184 23968 47883 38600 38600 1 9606 Homo sapiens -0.010147471358095572 SRAPISAK Unmodified 828.48175 0.48175096 3683;2257 Q53FW2;P60891;A0A2R8Y7H4;P60891-2;A0A6Q8PHK9;B1ALA7;B2R860;P11908;D3YTJ7;A6NMS2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 0 1 2.5 0.5 1 1 32.179 32.248 3 0.0024246 6465 20230619_1882_Aki_TMTPro18x_K_F3 110.88 55.512 134780 60331 170530 163840 264690 257470 168250 223240 185700 127560 220540 242150 155700 161700 233700 79804 242950 204580 124550 56192 171550 157970 264550 252290 176010 227700 189320 137540 222080 237700 164860 165090 235890 89026 232100 193130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88551000 25530 3683;2257 23969 47884;47885 38601 38601 1 9606 Homo sapiens 0.06064935445840547 SRCPDGSTCCELPSGK Unmodified 1809.7444 0.7444023 2502 B4DJI2;P28799;K7EKL3;P28799-2;K7EMR1 GRN Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 yes no 0 0 1 5 0 1 37.461 37.554 3 0.00085932 8490 20230619_1885_Aki_TMTPro18x_K_F5 73.296 67.867 16586 14623 15689 13918 22727 17981 21762 22255 22838 18607 21737 19953 20925 17009 26705 22746 26506 20268 15338 13382 16101 14189 22966 17998 22027 22331 23149 19040 22322 20116 21654 17944 27018 22641 25319 19300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21800000 25531 2502 23970 47886 38602 38602 1 9606 Homo sapiens -0.12808012515824885 SRDEWDK Unmodified 934.41446 0.41445926 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;Q01433-5;Q01433-3;Q01433-4;A0A7P0Z4H6;H0YF16;A0A804H2H4;A0A590UK85 AMPD2 AMP deaminase 2 yes no 0 0 1 2.5 0.5 1 1 36.227 36.284 3 0.023122 8094 20230619_1882_Aki_TMTPro18x_K_F3 78.334 47.677 262030 169130 275060 296020 375230 391260 361470 393090 432500 340490 405870 451170 446870 365120 419070 247960 525290 447820 242070 155980 279980 289570 381310 388250 367440 399890 435260 350390 419810 449610 453450 373610 431440 262860 501030 423510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157250000 25532 1570 23971 47887;47888 38603 38603 1 9606 Homo sapiens -0.055371395557585856 SRDFNEECPR Unmodified 1308.5517 0.55169779 963 V9HWF0;A0A0A0MTH3;Q13418;Q13418-3;Q13418-2 HEL-S-28;ILK Integrin-linked protein kinase yes no 0 0 1 1.5 0.5 1 1 30.484 30.517 3 0.0014266 5880 20230619_1881_Aki_TMTPro18x_K_F2 93.258 85.347 30039 17202 24844 25679 30924 31828 35897 36659 42606 35141 35272 35594 40815 33040 35465 45724 47274 37040 27684 15841 25770 25316 31773 31820 36098 37059 42717 35620 36778 36055 41234 34830 36861 45229 45047 35310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142860000 25533 963 23972 47889;47890 38604 38604 1 9606 Homo sapiens -0.09023598738531291 SRDIFDCLEGAAR Unmodified 1508.7042 0.70417569 716 A0A024RCB9;Q9Y5U2-2;Q9Y5U2;A6NCC9;E9PME3;C9JHT9;C9JJV1;E9PL88;C9JDU0 TSSC4 Protein TSSC4 yes no 0 0 1 5.5 0.5 1 1 51.335 51.411 3 6.3299E-05 14357 20230619_1885_Aki_TMTPro18x_K_F5 112.72 94.621 47795 42338 51197 46885 45214 57293 54812 57394 61428 56184 52639 53648 58603 51988 58433 69379 65479 65149 44244 38793 51621 47144 47746 57137 54930 58571 61857 56780 54704 54553 59644 54591 59871 69169 62580 61925 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83236000 25534 716 23973 47891;47892 38605 38605 1 9606 Homo sapiens -0.02982823061779527 SRDLLVQQASQCLSK Unmodified 1731.8938 0.89376737 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 1 2 0 1 48.87 48.935 3 1.719E-08 13936 20230619_1881_Aki_TMTPro18x_K_F2 143.75 104.06 249920 218230 217050 232630 253280 261840 288520 311740 306900 289690 288440 275650 305140 245040 268600 353460 321970 320340 230940 199900 223870 234300 261060 263810 289440 314270 310890 293450 297460 279680 309140 259550 277190 351330 307540 304620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 829800000 25535 3957 23974 47893 38606 38606 1 9606 Homo sapiens 0.057096241607951015 SRDPGMVR Unmodified 916.45488 0.45488428 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-2;A0A0S2Z441;C9J8M6 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 1 5.5 0.5 1 1 26.444 26.497 3 0.0011789 4619 20230619_1886_Aki_TMTPro18x_K_F6 109.71 82.584 64184 43171 55678 49432 64866 59509 59472 60049 81997 64350 69167 56117 69069 54388 62635 54712 76103 55018 59218 39612 57345 49575 66473 59467 60972 61402 81703 64600 71465 57308 70176 56210 64491 55031 72538 52330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105380000 25536 1091 23975 47894;47895 38607;38608 38608 2 9606 Homo sapiens -0.0066849643696969 SRDPGMVR Oxidation (M) 932.4498 0.4497989 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-2;A0A0S2Z441;C9J8M6 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 1 1 5.5 0.5 1 1 23.061 23.115 3 0.079971 3808 20230619_1886_Aki_TMTPro18x_K_F6 54.722 27.198 257850 192560 259170 255860 291680 324230 294550 306360 365380 283040 335340 307890 306690 277380 289410 259950 377590 285910 238310 176870 263640 254080 300580 322190 299040 313500 366690 288230 344010 310440 313310 286160 299240 263120 359780 271620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92448000 25537 1091 23975 47896;47897 38609 38609 664 1 9606 Homo sapiens -0.019128002995898896 SRDPQLCR Unmodified 1030.4978 0.49781173 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;I3L4S2 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 1 5.5 0.5 1 1 26.94 26.993 3 0.0010353 4701 20230619_1885_Aki_TMTPro18x_K_F5 122.52 63.536 48574 25351 44570 50686 54662 62896 54801 61247 74859 46808 55561 52199 51720 50684 61201 32222 70255 52358 44783 23454 45803 49215 56048 62574 55859 62273 74253 48303 57742 52675 53423 51358 62392 33910 67008 49582 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124520000 25538 534 23976 47898;47899 38610 38610 1 9606 Homo sapiens -0.016217263795624604 SRDPWEPPR Unmodified 1138.552 0.55195579 2830 D3DVC4;P48681;Q2YDX4;Q9H6U9 NES Nestin yes no 0 0 1 5 0 1 36.322 36.414 3 0.012518 8027 20230619_1885_Aki_TMTPro18x_K_F5 70.1 47.761 112230 68557 121210 107050 134790 142720 133100 132950 171420 147700 184590 169010 183930 154810 159190 123850 210110 188240 103680 63148 122490 105400 138870 141350 135510 136860 172880 149200 188590 170090 186580 158630 164900 128690 200380 178190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49915000 25539 2830 23977 47900 38611 38611 1 9606 Homo sapiens -0.011778109563465478 SRDSFLK Unmodified 851.45012 0.45011648 3593 Q6IAX2;P46778;M0R181 RPL21 60S ribosomal protein L21 yes no 0 0 1 8 0 1 39.121 39.107 3 0.020013 9122 20230619_1888_Aki_TMTPro18x_K_F8 81.548 29.552 382990 325440 342790 322470 465200 387170 371740 437200 451170 383070 378540 353110 475910 342180 320490 530740 590110 403590 353910 297950 353060 327130 470240 388250 382860 441390 452390 389180 395710 360020 475200 363420 344580 522540 560710 385360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65145000 25540 3593 23978 47901 38612;38613 38613 2 9606 Homo sapiens 0.01844942691900542 SRDSLAPGPEPQDEDQK Unmodified 1867.8548 0.85479891 1393 H0YAN8;A0A2X0U4L4;O15013-7;O15013-4;O15013-5;O15013-6;O15013 ARHGEF10 Rho guanine nucleotide exchange factor 10 yes no 0 0 1 2.5 0.5 1 1 38.458 38.516 3 2.8045E-14 9125 20230619_1881_Aki_TMTPro18x_K_F2 168.08 150.38 31604 28179 31202 31359 30355 35366 35786 32743 36651 43679 46665 40610 42522 41558 35127 52314 54771 49070 29237 25820 31722 31472 31751 35405 35801 33928 37708 43461 47175 41436 43234 43381 37027 52164 52175 46662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66886000 25541 1393 23979 47902;47903 38614 38614 1 9606 Homo sapiens -0.0444142965991432 SRDYMNAR Unmodified 1011.4556 0.45561256 3829 Q12996;B4DMA4;E9PLP8;B4DFQ5 CSTF3 Cleavage stimulation factor subunit 3 yes no 0 0 1 6.5 0.5 1 1 25.843 25.908 3 0.001624 3783 20230619_1887_Aki_TMTPro18x_K_F7 117.04 92.113 49124 40419 48566 43658 64425 63615 57068 59489 71559 38906 51392 47096 43564 38384 47347 37538 53308 41969 45421 37037 49581 44116 65430 62742 58404 60485 71155 40731 53312 47171 44914 39830 48348 38024 50869 39857 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12748000 25542 3829 23980 47904;47905 38615;38616 38616 2 9606 Homo sapiens -0.04965701787943999 SREAIDSPVSFLALHNQIR Unmodified 2152.1389 0.1389001 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 1 2.5 0.5 1 1 52.228 52.28 4 4.7497E-14 15453 20230619_1881_Aki_TMTPro18x_K_F2 147.16 118.15 146470 133690 142310 141990 125320 159030 155230 178010 170080 159420 177580 171020 176530 143350 159710 173470 178400 169040 135500 122440 144680 143050 132490 159940 155350 179950 172670 162420 181750 172220 179360 150390 163810 173560 170440 160640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89987000 25543 462 23981 47906;47907 38617 38617 1 9606 Homo sapiens 0.10891620895290544 SREDAGDNDDTEGAIGVR Unmodified 1875.8195 0.81947604 633 Q53GJ1;Q9H4E3;A0A024RAS3;Q9H0S4-2;Q9H0S4;Q7Z4B1 E4-DBP;hCG_27698;DDX47;MST162 Probable ATP-dependent RNA helicase DDX47 yes no 0 0 1 1 0 1 34.667 34.667 3 1.1811999999999999E-59 7828 20230619_1880_Aki_TMTPro18x_K_F1 245.67 228.18 44079 32167 43483 42916 54179 56450 52718 46053 57039 57583 58352 53860 57397 43443 59709 58701 58261 49664 40727 29550 44377 42625 55362 55821 53358 48080 57939 57471 59750 54506 58678 45977 60587 58248 55698 47298 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179480000 25544 633 23982 47908 38618 38618 1 9606 Homo sapiens -0.0834009218774554 SREDEDALEQAR Unmodified 1417.6433 0.64334957 3288 O60885;Q96HN0 BRD4 Bromodomain-containing protein 4 yes no 0 0 1 1 0 1 33.376 33.376 3 4.1458E-10 7314 20230619_1880_Aki_TMTPro18x_K_F1 188.13 144.75 51123 46890 56547 58522 59489 66433 58161 55905 71729 69878 81698 81609 87787 68041 63712 92028 92006 83797 47349 43008 57046 58242 61534 66339 59158 58231 72701 70244 83582 81895 88236 71908 66925 91548 87700 79708 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119810000 25545 3288 23983 47909 38619 38619 1 9606 Homo sapiens -0.04876636840344872 SREDMIDIK Unmodified 1105.5438 0.54375887 342 P20340;A0A024R5J5;P20340-2;A0A024R5H8;Q6FGX3;Q53ET8;P20340-4;B7Z5Z9;P20340-3;F5H3K7 RAB6A Ras-related protein Rab-6A yes no 0 0 1 4 0 1 43.68 43.724 3 0.0023204 11149 20230619_1883_Aki_TMTPro18x_K_F4 90.827 48.843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25546 342 23984 47910 38620 38620 1 9606 Homo sapiens -0.004791259879766585 SREEDFR Unmodified 937.42536 0.42535829 4210 Q8IXT5;B9ZVT1 RBM12B RNA-binding protein 12B yes no 0 0 1 1 0 1 27.679 27.679 3 0.026741 5093 20230619_1880_Aki_TMTPro18x_K_F1 73.248 37.368 67491 35085 55587 75759 76615 87985 75510 75244 91903 60635 83935 86303 82222 75584 74098 52167 98953 85694 62174 32502 57904 73206 77967 87658 76679 77388 92246 62916 86426 86046 83647 77092 76726 54762 94346 81086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30022000 25547 4210 23985 47911 38621 38621 1 9606 Homo sapiens -0.04585737181469085 SRENPEEDEDQRNPAK Unmodified 1912.8511 0.85111052 3550 P35610;B1APM4 SOAT1 Sterol O-acyltransferase 1 yes no 0 0 2 1.6 0.8 3 1 1 29.954 29.995 3;4;5 9.6315E-11 5707 20230619_1881_Aki_TMTPro18x_K_F2 149 138.35 41902 32869 44468 47657 69934 71761 63975 60421 78388 59839 70005 69145 79561 65103 63445 61704 84656 70651 38755 30214 45364 47200 70431 70467 65256 62484 78662 60847 72616 69635 80135 67131 65948 62580 80696 67061 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 152570000 25548 3550 23986 47912;47913;47914;47915;47916 38622;38623;38624;38625;38626 38625 5 9606 Homo sapiens -0.06880099433783471 SREPTDTNVLR Unmodified 1286.6579 0.65787742 4237 Q8N6N2 TTC9B Tetratricopeptide repeat protein 9B yes yes 0 0 1 4 0 1 32.626 32.683 3 4.5582E-05 6591 20230619_1883_Aki_TMTPro18x_K_F4 136.27 97.009 37440 25336 34953 33321 24588 21220 29504 25476 31464 45014 53002 58630 47351 48595 46156 47899 58134 60551 34563 23279 35533 32849 26451 22500 29557 26294 32833 44829 53157 58518 48507 50392 47627 48853 55523 57368 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30201000 25549 4237 23987 47917 38627 38627 1 9606 Homo sapiens 0.02601480098473985 SREQMINDR Unmodified 1147.5404 0.54040483 490 A0A024R832;Q8NHZ8 CDC26 Anaphase-promoting complex subunit CDC26 yes no 0 0 1 3 0 1 26.755 26.884 3 0.069725 4595 20230619_1882_Aki_TMTPro18x_K_F3 54.608 32.134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25550 490 23988 47918 38628 38628 1 9606 Homo sapiens -0.027463760419777827 SREQPSVLSR Unmodified 1157.6153 0.61528433 616 A0A024RAC0;Q86V48-2;Q86V48-3;Q86V48 LUZP1 Leucine zipper protein 1 yes no 0 0 1 7 0 1 30.072 30.175 3 0.00021409 5467 20230619_1887_Aki_TMTPro18x_K_F7 120.77 81.148 13551 12663 11915 11678 15813 16847 17039 17387 21760 16837 14807 16052 18307 14894 18150 21194 18147 15861 12529 11583 12299 11956 16155 16665 17244 17699 21618 17032 15685 16299 18566 15730 18475 20891 17347 15130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7161700 25551 616 23989 47919 38629 38629 1 9606 Homo sapiens 0.04278129760905358 SREQSSEAAETGVSENEENPVR Unmodified 2404.0739 0.073852823 3001 G1UI16;Q29RF7;B3KMN2;Q96DB6 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 1 1 0 1 34.31 34.31 3 6.075100000000001E-68 7688 20230619_1880_Aki_TMTPro18x_K_F1 312.06 297.45 39205 35958 39005 42038 46577 52583 47835 45836 46271 51687 53614 51136 52650 41916 44210 60170 55277 50975 36278 32960 39776 42092 47808 52220 48114 47447 47552 51893 54598 51652 53352 44506 45804 59610 52752 48530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100650000 25552 3001 23990 47920 38630;38631 38630 2 9606 Homo sapiens -0.07202114949905081 SREVLELGQVLDTGK Unmodified 1642.889 0.88899957 1049 A0A0J9YYJ0;Q8N129 CNPY4 Protein canopy homolog 4 yes no 0 0 1 7 0 1 56.575 56.633 3 0.0052387 16422 20230619_1887_Aki_TMTPro18x_K_F7 67.299 47.574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25553 1049 23991 47921 38632 38632 1 9606 Homo sapiens 0.09327063289629223 SREWDMEALR Unmodified 1291.5979 0.5979197 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 1 4 0 1 44.335 44.379 3 0.00014816 11447 20230619_1883_Aki_TMTPro18x_K_F4 109.16 68.567 85439 66471 85722 80918 88552 110700 96830 102010 118260 94030 87345 96545 100180 86674 118780 104040 106440 100030 78981 60989 87089 80941 92106 109440 97814 104560 117990 95587 91757 97552 102730 90637 119680 104100 101910 95079 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77625000 25554 673 23992 47922 38633 38633 1 9606 Homo sapiens -0.03621533836417257 SREYQLNDSASYYLNDLDR Unmodified 2321.056 0.056017914 3415 P08754 GNAI3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 0 0 1 4.5 0.5 1 1 53.649 53.669 3 3.9061E-32 15354 20230619_1885_Aki_TMTPro18x_K_F5 218.79 180.57 46611 37667 42941 43482 39864 38946 45459 41412 38603 56615 49304 45012 53112 43214 55161 54701 46511 48729 43068 34538 43875 43395 41744 39814 45318 42555 40238 56012 50243 46163 54150 45257 55577 54457 44600 46338 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140110000 25555 3415 23993 47923;47924 38634;38635 38635 2 9606 Homo sapiens -0.05166785414030528 SRFTDDDK Unmodified 982.43559 0.43558863 3634 V9HWE8;P52565;J3QW41;A0A0S2Z3D9;J3KRE2 HEL-S-47e;ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 0 0 1 3.5 0.5 1 1 34.407 34.462 3 0.049929 7360 20230619_1882_Aki_TMTPro18x_K_F3 59.645 10.278 83438 41658 71416 76123 85146 102170 70418 94408 125200 90566 130690 203610 165650 161790 86493 117340 295150 346270 76873 38497 73774 74324 87179 101060 73616 96854 124540 95234 135710 199850 164590 166140 101010 131260 280730 326270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88621000 25556 3634 23994 47925;47926 38636 38636 1 9606 Homo sapiens -0.05633174246895578 SRGCAVVEFK Unmodified 1151.5757 0.5757277 3631 P52272-2;P52272;M0R019;M0R2T0;B4DEG4;M0R0N3 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 1 1 0 1 41.169 41.169 3 0.0014534 10624 20230619_1880_Aki_TMTPro18x_K_F1 91.961 48.449 45198 54824 61203 46639 78529 65484 55941 70058 57789 50890 60315 55632 52150 44334 75234 53019 65142 54301 42041 50081 60976 48115 79376 64991 57845 70672 58873 52581 61429 55917 54571 46562 75412 53287 62350 51602 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253120000 25557 3631 23995 47927 38637 38637 1 9606 Homo sapiens 0.006002864858373869 SRGSGEQDWVNRPK Unmodified 1614.7863 0.78626584 4175 Q7Z5L9-2;Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes no 0 0 2 8 0 1 34.443 34.435 4 1.468E-06 7256 20230619_1888_Aki_TMTPro18x_K_F8 103.6 91.049 52589 54932 49641 38279 48339 47947 49983 56772 37947 41818 57177 39174 53262 42061 54071 49287 54720 39054 48689 50137 50573 40269 50284 48030 49992 56945 40101 42953 57482 40094 54485 43676 54972 48866 52241 37259 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29807000 25558 4175 23996 47928 38638 38638 1 9606 Homo sapiens 0.0034641534155070985 SRIESEVR Unmodified 974.51451 0.51450765 2242 B2R7C2;O43264;O43264-2;B4DUQ3 ZW10 Centromere/kinetochore protein zw10 homolog yes no 0 0 1 2.67 0.471 1 2 29.295 29.382 3 0.0064388 5358 20230619_1882_Aki_TMTPro18x_K_F3 91.867 54.391 60255 37555 54255 55663 71962 70588 66429 63860 82370 61837 65743 54289 63568 53642 58054 62527 71409 56823 55588 34566 55877 54901 73166 70092 67767 65641 82298 62431 68056 55486 64703 55827 59885 62367 68093 54084 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73783000 25559 2242 23997 47929;47930;47931 38639;38640 38639 2 9606 Homo sapiens 0.02623097778052852 SRLDQELK Unmodified 987.53491 0.53490874 299 A0A024R4M0;P46781;B5MCT8;C9JM19;B7Z732;F2Z3C0;A8MXK4 RPS9 40S ribosomal protein S9 yes no 0 0 1 4 0 1 39.271 39.313 3 0.070242 9267 20230619_1883_Aki_TMTPro18x_K_F4 52.126 12.028 211170 174130 183170 211050 243440 251550 234760 205180 285460 220970 240680 225570 257540 207980 218350 261700 283140 243040 195060 159730 189460 210580 247860 250300 238630 213340 286000 222830 249640 228340 260460 217980 226520 260960 270000 231190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271540000 25560 299 23998 47932 38641 38641 1 9606 Homo sapiens 0.040642684378553895 SRLGDLYEEEMR Unmodified 1496.6929 0.6929423 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8 VIM;HEL113 Vimentin yes no 0 0 1 2.5 1.12 1 1 1 1 46.287 46.337 3 1.234E-05 12724 20230619_1881_Aki_TMTPro18x_K_F2 136.3 110.98 141460 141850 134640 119580 224180 234880 173630 195200 210530 210600 213140 194510 226880 163950 216730 213150 216960 198230 130940 129640 138580 124250 224390 227980 179160 202320 212640 211540 219050 197230 230420 172860 220550 212600 207450 188510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 654280000 25561 3414 23999 47933;47934;47935;47936 38642 38642 1 9606 Homo sapiens -0.03553645155875529 SRLPGIVAEGR Unmodified 1153.6568 0.65675521 2788 CON__P41361 yes yes 0 0 1 2 0 1 38.931 38.997 3 8.5011E-05 9301 20230619_1881_Aki_TMTPro18x_K_F2 127.34 89.761 + 34486 29171 32518 42527 63717 82803 49788 48088 95420 217190 389190 627130 238810 285380 408900 223990 314190 427610 31880 26809 33748 42305 63542 79865 52586 56226 106300 222420 380730 605110 256860 301900 406600 238130 302310 403580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 472740000 25562 2788 24000 47937 38643 38643 1 0.08607310520233113 SRNDQVVTDLR Unmodified 1301.6688 0.66877646 768 A0A5F9ZHC6;B4DU69;A0A5F9ZHM8;A0A0S2Z3B0;F8W943;A0A0S2Z316;A0A024RDL8;P04424-3;P04424-2;P04424 ASL Argininosuccinate lyase yes no 0 0 1 4 0 1 34.4 34.451 3 7.8378E-05 7330 20230619_1883_Aki_TMTPro18x_K_F4 128.85 83.59 36508 24014 38267 37514 42310 43143 45562 52144 50811 45021 53961 60659 53931 51095 54541 44582 65062 63205 33730 22112 38782 36851 43681 43390 45934 52433 51565 46346 55271 60511 55117 52672 55970 45986 62136 59842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28901000 25563 768 24001 47938 38644 38644 1 9606 Homo sapiens 0.03000882472770172 SRPAPSPESIK Unmodified 1167.6248 0.62478638 4272 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 yes no 0 0 1 7.5 0.5 1 1 36.293 36.32 3 0.00021617 7983 20230619_1888_Aki_TMTPro18x_K_F8 114.72 76.418 85289 59677 76610 87756 95842 107580 90375 93450 116850 84941 103190 98780 106660 88200 93576 117790 116470 87013 78727 54892 78902 86521 97964 106910 92251 96214 116880 86800 106620 99397 108140 92837 96771 116120 111010 83080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 74914000 25564 4272 24002 47939;47940 38645;38646 38646 2 9606 Homo sapiens 0.04767898046429764 SRPDEGVYVCVAR Unmodified 1506.7249 0.72491113 867 A0A087WZ85;A0A0A0MSX4;Q1RMC8;Q2M1J3;Q9Y6N7-6;Q9Y6N7-5;Q9Y6N7-4;Q9Y6N7-3;Q9Y6N7;Q9Y6N7-2;B4DMJ0 ROBO1 Roundabout homolog 1 yes no 0 0 1 5.5 0.5 1 1 39.038 39.125 3 0.05564 9197 20230619_1886_Aki_TMTPro18x_K_F6 46.704 33.042 116810 87975 133350 123790 148670 148570 134850 142010 191760 125950 153960 125350 126370 103760 140530 123610 149610 95836 108090 80855 134220 122400 152770 148200 138550 145070 190360 128260 158340 126670 130520 108760 143040 122440 142690 91517 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100080000 25565 867 24003 47941;47942 38647 38647 1 9606 Homo sapiens -0.008182326821042807 SRPELLEYYIK Unmodified 1409.7555 0.7554662 3885 Q59GW5;Q14258;D3DTY9 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes no 0 0 1 4.5 3.5 1 1 54.721 54.721 3 0.0001506 15564 20230619_1888_Aki_TMTPro18x_K_F8 113.95 57.852 93305 80799 89798 116380 139130 160280 141620 146500 150360 102600 114920 132970 119050 105030 123480 134090 122230 138290 86281 74240 92454 115090 140720 158340 142840 149410 151130 107040 119920 132700 121620 110760 125480 134490 117080 131240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 305320000 25566 3885 24004 47943;47944 38648;38649 38649 2 9606 Homo sapiens 0.06697868974606536 SRPIYVSTVRPQSK Unmodified 1616.8998 0.89983903 925 A0A3B3ISH2;A0A0A0MQY7;Q5VU97 CACHD1 VWFA and cache domain-containing protein 1 yes no 0 0 2 7.5 0.5 1 1 36.856 36.882 4 0.0016907 8038 20230619_1887_Aki_TMTPro18x_K_F7 81.619 67.956 27420 18776 22336 24294 23432 26974 24718 26608 28467 31124 28622 36657 35601 26909 35950 36205 33190 34298 25290 17248 23140 24115 24314 27060 24973 27325 28826 31368 29730 36604 36103 28577 36399 36128 31790 32592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36609000 25567 925 24005 47945;47946 38650 38650 1 9606 Homo sapiens 0.11606510454612362 SRPLSDQEK Acetyl (Protein N-term) 1100.5462 0.54620171 1055 B4DRW6;B2RB32;A0A0M4FEM1;P11217;P11217-2;B4DRQ4 PYGM Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, muscle form yes no 1 0 1 2 0 1 33.308 33.366 2 0.0031221 7032 20230619_1881_Aki_TMTPro18x_K_F2 41.876 17.541 22330 14453 37832 5969 1151.6 5060.7 7109.8 7520.7 6540.4 18656 27688 27654 26176 23956 30614 18437 40202 33130 20740 13185 36383 6816.1 4249.3 5269.5 6902.6 7810.9 7554.5 18506 27357 27523 26987 24552 31507 19477 38324 31338 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13800000 25568 1055 24006 47947 38651 38651 1 9606 Homo sapiens -4.9542586793904775E-05 SRPQGLTEAEQR Unmodified 1370.6902 0.69024019 1290 D3DR86;A0A1P8C958;Q00653-3;Q00653-4;Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes no 0 0 1 3.5 0.5 1 1 30.028 30.108 3 0.0001768 5605 20230619_1883_Aki_TMTPro18x_K_F4 86.699 54.201 21984 19346 20447 22451 33686 38108 32962 32354 39727 28945 30294 29840 30506 27855 28622 24675 36349 30967 20326 17734 21119 22619 33941 37209 33460 33342 39685 29491 31533 30176 31064 28634 29538 25217 34666 29366 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26472000 25569 1290 24007 47948;47949 38652;38653 38653 2 9606 Homo sapiens 0.019722675014463675 SRQEDPEQLR Unmodified 1256.6109 0.61092723 1041 A0A8I5KRH3;A0A0G2JRY5;O00268 TAF4 Transcription initiation factor TFIID subunit 4 yes no 0 0 1 1.5 0.5 1 1 29.106 29.142 3 0.00061024 5673 20230619_1880_Aki_TMTPro18x_K_F1 104.82 84.036 24568 19220 22103 21140 27454 26988 26894 27775 35036 29858 35060 32249 31930 28566 26176 28887 35830 34999 22693 17618 22729 21282 28071 26878 27400 28365 35211 30147 35802 32509 32431 29609 27265 29359 34183 33180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18672000 25570 1041 24008 47950;47951 38654;38655 38654 2 9606 Homo sapiens -0.007113794526730999 SRRPEPVQTLDEAR Unmodified 1652.8594 0.85943078 3048 H0YIE8;Q9BRX9 WDR83 WD repeat domain-containing protein 83 yes no 0 0 2 5 0 1 31.328 31.405 4 1.0615E-06 6209 20230619_1885_Aki_TMTPro18x_K_F5 133.47 110.55 8650.9 7911.8 11016 7206.8 13486 12870 10198 11793 10339 12513 13151 11559 11433 10131 13181 9720.7 12601 10354 8023.3 7237 11004 7424.6 13701 12570 10490 12127 10651 12573 13279 11727 11806 10476 13320 9824.2 12047 9836.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8603800 25571 3048 24009 47952 38656 38656 1 9606 Homo sapiens 0.059115440641789974 SRSDIDVNAAAGAK Unmodified 1373.6899 0.68990583 1149 O75122-3;E7EW49;O75122;E7ERI8;A0A804HJG7;A0A0U1RQI6;J3KR49;E3W994;B4DM73;A0A024R2L7;Q8NB74;A0A024R2J1;B4DG03;E7ENG2;B3KR06;O75122-2;A0A024R2S6 CLASP2 CLIP-associating protein 2 yes no 0 0 1 6 0 1 38.556 38.638 3 0.01122 8985 20230619_1886_Aki_TMTPro18x_K_F6 67.136 35.908 15893 13681 18674 16915 17703 20267 16349 17909 18056 16163 26680 26956 27336 23202 24090 20445 23260 26077 14721 12550 18711 16865 18428 20183 16639 18415 18621 16760 26996 26753 27713 23911 24488 20921 22282 24698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6460100 25572 1149 24010 47953 38657 38657 1 9606 Homo sapiens 0.018008477816238155 SRSEVDLTR Unmodified 1061.5465 0.54653606 3057 Q9P2T1;Q6PKC0;Q9P2T1-3;H0YMB3;Q9P2T1-2;Q7Z527;H0YNJ6;H0YLV5;H0YNH0;H0YMG3;H0YMR9;A0A0B4J281;H0YMV5;H0YN74;H0YKK3 GMPR2 GMP reductase 2;GMP reductase yes no 0 0 1 3.5 0.5 1 1 30.495 30.576 3 0.0018965 5833 20230619_1882_Aki_TMTPro18x_K_F3 94.297 49.16 76159 55344 72597 69037 102120 93245 89078 93856 130770 73919 102700 109460 90054 86486 92325 85126 115300 103490 70346 50806 74442 68934 103320 92505 91829 95283 129510 76958 106180 108730 92527 89848 95062 86630 110010 98143 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69113000 25573 3057 24011 47954;47955 38658;38659 38658 2 9606 Homo sapiens 0.018224654611913138 SRSPGSPVGEGTGSPPK Unmodified 1595.7903 0.79034816 1741 P35611-3;E7EV99;P35611;P35611-4;P35611-6;P35611-2;A0A804HL01;E7ENY0;H0Y9H2;Q4TT76;P35611-5;Q96D30;B4DPW4 ADD1;LA04NC01-25A3.2-001 Alpha-adducin yes no 0 0 1 7 0 1 34.609 34.685 3 3.6541E-09 7173 20230619_1887_Aki_TMTPro18x_K_F7 131.45 99.44 17307 14367 15032 12977 22118 23708 15251 14264 17793 16161 20414 22534 20254 19736 22392 23429 28721 29638 15987 13145 15549 13367 22235 22956 15858 15274 18089 16439 20835 22497 20804 20640 23086 23826 27425 28081 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20163000 25574 1741 24012 47956 38660 38660 1 9606 Homo sapiens 0.01628460044616986 SRSPSTESQLMSK Oxidation (M) 1452.6879 0.68785692 3551 Q05DK5;P35612-4;P35612-3;P35612;A0A1C7CYY0;P35612-5;P35612-6;Q96HD4 ADD2 Beta-adducin yes no 0 1 1 7 0 1 33.201 33.288 3 0.036404 6632 20230619_1887_Aki_TMTPro18x_K_F7 57.679 41.923 15206 12501 16585 22249 23250 25456 11973 10495 12640 15675 18917 21604 16839 15726 23412 13595 22796 16198 14071 11520 16858 21668 23318 25146 12763 11919 13114 15751 19055 21438 17570 16294 23599 13879 21772 15382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9575000 25575 3551 24013 47957 38661 38661 2217 1 9606 Homo sapiens -0.02037949018517793 SRSPSTESQLMSK Unmodified 1436.6929 0.6929423 3551 Q05DK5;P35612-4;P35612-3;P35612;A0A1C7CYY0;P35612-5;P35612-6;Q96HD4 ADD2 Beta-adducin yes no 0 0 1 8 0 1 37.97 37.956 3 0.064391 8676 20230619_1888_Aki_TMTPro18x_K_F8 45.33 18.657 30182 19793 33658 38534 47765 50589 36617 46762 32606 32748 47592 51316 37438 38586 47430 34804 51456 48048 27900 18282 34137 37490 48158 50117 37491 47636 34033 34389 47729 50812 39050 39995 48204 35824 49171 45509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19848000 25576 3551 24013 47958 38662 38662 1 9606 Homo sapiens -0.007936451559089619 SRVEQEQEAK Unmodified 1202.5891 0.58912916 2698 Q9H6Z4;Q9H6Z4-2;Q9H6Z4-3;Q53GE1;B7Z7F3;Q308M8;B7Z5P4;K7EIJ4 RANBP3 Ran-binding protein 3 yes no 0 0 1 2.5 0.5 1 1 30.059 30.14 3 0.00067044 5771 20230619_1881_Aki_TMTPro18x_K_F2 102.4 62.483 18395 12595 28449 27500 45592 42721 33670 41248 31332 23286 43051 45352 30177 25147 42546 12551 44510 39697 17068 11653 28306 26721 45580 41992 34600 41733 32466 25149 43095 44319 31785 25967 42982 14432 42534 37434 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22810000 25577 2698 24014 47959;47960 38663 38663 1 9606 Homo sapiens -0.004061842012333727 SRWDETPASQMGGSTPVLTPGK Oxidation (M) 2317.1009 0.10085962 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 1 1 8 0 1 47.19 47.239 3 0.00011731 12376 20230619_1888_Aki_TMTPro18x_K_F8 73.091 62.833 12488 11590 12985 12017 11853 11898 15059 14361 12535 16773 15659 13612 17406 14616 14737 17353 11306 15773 11561 10612 13127 12113 12466 12107 14925 14563 13058 16716 15983 14005 17572 15191 14860 17300 10881 14982 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31014000 25578 3309 24015 47961 38664 38664 1939 1 9606 Homo sapiens -0.00500677872378219 SRWDETPASQMGGSTPVLTPGK Unmodified 2301.1059 0.10594499 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 1 8 0 1 51.124 51.201 3 5.1621E-12 14016 20230619_1888_Aki_TMTPro18x_K_F8 127.63 114.01 23415 20814 24692 21257 19025 29227 21549 24718 24295 27386 26212 24566 27762 23726 23121 31508 28530 27361 21673 19058 24878 21552 20343 28833 21693 25616 24692 27446 26856 25054 28070 24910 23937 31280 27237 26036 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72270000 25579 3309 24015 47962 38665 38665 1 9606 Homo sapiens 0.007436259902078746 SRWESSNK Unmodified 992.46756 0.46755746 3569 P40222 TXLNA Alpha-taxilin yes yes 0 0 1 7.5 0.5 1 1 32.687 32.73 3 0.0079409 6605 20230619_1888_Aki_TMTPro18x_K_F8 88.364 44.591 58284 31356 78898 64725 98156 105770 77209 93496 93654 29756 36956 33821 32546 29364 54209 16316 46992 25776 53936 29019 78626 63124 99819 103470 79600 94578 92030 33722 40421 34029 34422 29752 54120 17269 44884 24459 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30044000 25580 3569 24016 47963;47964 38666 38666 1 9606 Homo sapiens -0.02897761773090224 SRYDSIDSYLSK Unmodified 1432.6834 0.68342347 1371 B4E2I4;E1CEI4;Q14TF0;A0A2R8YEL6;P48506;A0A2R8Y648 GCLC Glutamate--cysteine ligase catalytic subunit yes no 0 0 1 8 0 1 50.14 50.216 3 0.0001826 13628 20230619_1888_Aki_TMTPro18x_K_F8 106.55 56.196 165270 137620 158370 174770 146800 165090 152610 159760 180720 203380 187830 194630 194590 180930 191290 229220 217950 234190 152780 126290 161360 173300 153640 167560 154510 164770 182980 202910 192750 197520 198370 189600 196270 229730 208390 222320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73698000 25581 1371 24017 47965 38667 38667 1 9606 Homo sapiens -0.01561090169752788 SRYEQVDLVGK Unmodified 1292.6725 0.67246486 2610 B4DW97;Q9BQ39;B4DED6;Q9NTA9;Q53FI9 DDX50;DKFZp761E0323 ATP-dependent RNA helicase DDX50 yes no 0 0 1 6.5 0.5 1 1 43.892 43.979 3 0.001892 11236 20230619_1886_Aki_TMTPro18x_K_F6 87.001 53.772 247740 166580 229170 247770 266950 322710 291040 279100 327820 269050 312840 320790 332780 281240 295470 311830 334050 342830 228680 153270 235080 244390 275230 319440 293120 287890 331080 274180 322600 322020 337250 293050 303330 314580 319310 325270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 473860000 25582 2610 24018 47966;47967 38668;38669 38668 2 9606 Homo sapiens 0.03783552246591171 SSADTEFSDECTTAER Unmodified 1804.7058 0.70575141 4521 Q9H6S0;Q6ZMY0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 yes no 0 0 0 1 0 1 39.538 39.538 2 1.0621E-18 9891 20230619_1880_Aki_TMTPro18x_K_F1 200.21 186.3 8823.6 7647.7 7482.8 7684.7 10674 11620 9483.7 6494.6 8082.3 10904 10122 11855 13629 12089 11573 14301 14482 14527 8151.7 7002 7761.9 7808.5 10800 11340 9582.5 7115 8416.2 10816 10457 11997 13707 12577 11979 14340 13829 13795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13805000 25583 4521 24019 47968 38670 38670 1 9606 Homo sapiens -0.16441323344952252 SSAEVIAQAR Unmodified 1030.5407 0.5407224 1284;4185 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q86U75 DPYSL2 Dihydropyrimidinase-related protein 2 no no 0 0 0 5.5 1.71 1 1 1 1 1 1 37.417 37.47 2 3.7346E-05 8490 20230619_1883_Aki_TMTPro18x_K_F4 151.48 101.93 1420200 1117100 1253700 1289300 1261800 1333500 1481200 1455300 1729500 1537500 1838400 1840600 1815800 1466200 1567400 1797900 2095000 1804900 1311600 1024400 1287800 1289100 1316100 1348300 1488500 1480700 1751000 1558700 1879800 1842500 1842100 1542400 1628500 1801200 1997400 1715300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3703699999.9999995 25584 1284;4185 24020 47969;47970;47971;47972;47973;47974 38671;38672;38673 38672 3 9606 Homo sapiens 0.026673669495039576 SSALQWLTPEQTSGK Unmodified 1631.8155 0.81550028 1222 A0A140VK27;P09960;B4DVZ8;P09960-2;P09960-4;Q59ES1;P09960-3 LTA4H Leukotriene A-4 hydrolase;Leukotriene A(4) hydrolase yes no 0 0 0 1.5 0.5 1 1 59.217 59.223 3 0.00083938 18345 20230619_1881_Aki_TMTPro18x_K_F2 77.746 65.723 62712 55734 60137 60002 65386 65517 67717 69200 86182 53953 56412 41889 55211 46339 58067 61712 52761 54523 58000 51054 61373 60357 67544 65952 68699 70020 85463 55045 59140 43323 56527 48474 58726 61355 50545 51856 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 240580000 25585 1222 24021 47975;47976 38674 38674 1 9606 Homo sapiens 0.02486514847169019 SSANVEEAFFTLAR Unmodified 1540.7522 0.75217174 3060 H0YNE9;Q92930 RAB8B Ras-related protein Rab-8B yes no 0 0 0 7 0 1 62.411 62.447 3 5.581E-07 18920 20230619_1887_Aki_TMTPro18x_K_F7 134.4 118.86 23813 21067 24047 26058 22281 28734 20850 24945 30538 29509 26586 26932 32793 24068 27132 33393 31235 30372 22032 19323 24394 25937 23298 28757 21424 25856 30424 29507 27731 27366 32982 25432 27949 33219 29840 28882 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60302000 25586 3060 24022 47977 38675 38675 1 9606 Homo sapiens 0.0034257412994520564 SSAPPITPECR Unmodified 1213.5761 0.57612163 2218 B2R5M3;P05060;B4DEA7;A0A0A0MT66 CHGB Secretogranin-1;PE-11;GAWK peptide;CCB peptide yes no 0 0 0 4 0 1 37.408 37.452 2 0.00046648 8538 20230619_1883_Aki_TMTPro18x_K_F4 137.95 118.68 16535 11709 11165 25085 11593 8101 26077 23327 21875 16138 14221 15855 18061 11334 10950 17874 17886 13531 15236 10828 11886 23981 12350 9819 25292 22616 22194 16672 15127 15960 17957 12197 11679 17593 17016 12913 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22097000 25587 2218 24023 47978 38676 38676 1 9606 Homo sapiens -0.0221233858501364 SSAQDPQAVLGALGR Unmodified 1468.7634 0.76340513 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;A0A140T954;A2ABF4;A0A0G2JJT9;A0A140T904 VARS Valine--tRNA ligase yes no 0 0 0 7.5 0.5 1 1 53.472 53.542 2 4.158E-07 15149 20230619_1887_Aki_TMTPro18x_K_F7 162.93 136.88 439620 382530 429100 433250 389090 469020 457050 459670 496110 617700 567510 579310 642150 526380 554960 694390 617030 662310 406580 350590 436240 434010 409460 471390 458310 474390 506760 614410 582240 588060 648740 553720 570070 692870 590090 629240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 728200000 25588 725 24024 47979;47980 38677;38678 38677 2 9606 Homo sapiens 0.04777396224085351 SSAQLQTNYPSSDNSLYTNAK Unmodified 2288.0557 0.055683563 3693 P61244;P61244-2;Q8TAX8;G3V5L1;G3V302 MAX Protein max yes no 0 0 0 8 0 1 49.405 49.478 3 0.00011346 13301 20230619_1888_Aki_TMTPro18x_K_F8 83.063 75.071 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25589 3693 24025 47981 38679 38679 1 9606 Homo sapiens -0.0368220513387314 SSASAPDVDDPEAFPALA Unmodified 1758.7948 0.79482442 4246 Q8NC51-2;Q8NC51;Q63HR1;Q5VU21;D3DQ70;Q8NC51-4;Q8NC51-3;D3DQ69 SERBP1;DKFZp686P17171 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 0 2.17 1.07 2 2 1 1 62.61 62.618 2;3 1.5562E-18 19535 20230619_1880_Aki_TMTPro18x_K_F1 170.56 164.4 247950 221100 246710 258520 234960 254280 255770 252020 289450 298120 292130 289680 308930 254040 282250 376040 317720 335030 229390 202680 250600 258010 245520 257480 257810 258900 293210 298540 300330 293430 313480 269670 289980 373320 303770 318580 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1297400000 25590 4246 24026 47982;47983;47984;47985;47986;47987 38680;38681;38682 38680 3 9606 Homo sapiens -0.05422120323146373 SSASFSTTAVSAR Unmodified 1270.6153 0.61534391 1274 P61764-2;P61764;A0A1B0GVQ5;A0A1B0GWF2;A0A1B0GTP9;A0A0D9SG72;A0A2R8Y5D4;B7Z2V7;B7Z1V5;B7Z3F4;Q59GC9;A0A096LP52 STXBP1 Syntaxin-binding protein 1 yes no 0 0 0 4.5 3.5 1 1 39.552 39.547 2 4.0342E-15 9280 20230619_1888_Aki_TMTPro18x_K_F8 231.05 192.96 151240 125060 135990 144640 90761 92586 104910 108060 114680 149340 169030 163060 159830 135940 159630 173870 191360 182330 139740 114660 138730 143850 98225 98022 105430 110530 118540 149030 170440 164040 163410 143130 164150 174540 182720 173120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 167350000 25591 1274 24027 47988;47989 38683;38684 38684 2 9606 Homo sapiens -0.009139150297642118 SSATVTGEPPSYSSGSDSSK Unmodified 1929.844 0.84395945 511 A0A8Q3SHZ4;A0A494C1F2;A0A024R8B6;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A8Q3WLX1 NUP214 Nuclear pore complex protein Nup214 yes no 0 0 0 4 0 1 41.362 41.405 3 9.0648E-08 10209 20230619_1883_Aki_TMTPro18x_K_F4 103.17 93.887 10214 8844.1 10329 11915 13859 15041 12599 12699 15194 15263 14935 15948 16793 13033 12937 16988 18056 15758 9449 8120.1 10546 11816 14084 14917 12855 13202 15331 15310 15419 16058 16894 13753 13526 16927 17210 14988 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103980000 25592 511 24028 47990 38685 38685 1 9606 Homo sapiens -0.08376876824831925 SSAVDPEPQVK Unmodified 1155.5772 0.57716749 4054 Q5SSJ5;Q5SSJ5-2;B0QZK4;Q5SWC8;Q5SSJ5-3 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 3 0 1 41.695 41.757 2 1.4578E-08 10334 20230619_1882_Aki_TMTPro18x_K_F3 212.03 171.99 79792 55411 71304 75420 88654 96772 96308 93741 119110 77668 95485 104990 111260 89010 85888 86903 117410 107070 73647 50925 73437 74789 90958 96141 97317 95549 118960 80266 99808 104780 111850 92269 89515 88501 111960 101520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87019000 25593 4054 24029 47991 38686 38686 1 9606 Homo sapiens 0.005601990555533121 SSAYESLMEIVK Oxidation (M) 1371.6592 0.65918256 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9;J3QKQ5 KPNB1 Importin subunit beta-1 yes no 0 1 0 6.5 0.5 1 1 58.182 58.243 3 8.0694E-06 17385 20230619_1886_Aki_TMTPro18x_K_F6 134.75 120.72 117280 104060 108130 110970 125790 127800 121900 114800 127440 106380 129060 109050 125530 106160 122360 129390 120350 141360 108430 95318 110870 111770 129080 127730 123320 117980 129510 108100 132060 110630 128070 110870 124420 130300 115310 134060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203440000 25594 3904 24030 47992;47993 38687 38687 2581 1 9606 Homo sapiens -0.011780666476624901 SSAYESLMEIVK Unmodified 1355.6643 0.66426794 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9;J3QKQ5 KPNB1 Importin subunit beta-1 yes no 0 0 0 7 0 1 62.794 62.83 3 0.063322 19226 20230619_1887_Aki_TMTPro18x_K_F7 30.336 6.7311 69192 48326 71660 69437 55587 84118 67313 68341 85627 74120 69772 80404 81235 68872 78988 89021 77394 96596 63940 44440 72357 68559 59529 83501 67783 71065 85552 74828 72918 80933 82443 72502 80335 89522 74199 91597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3661999999.9999995 25595 3904 24030 47994 38688 38688 1 9606 Homo sapiens 0.000662372149690782 SSCPLANSQYATIK Unmodified 1538.7399 0.73989249 4467 Q9BXY0;A0PJ56;H0YBV6 MAK16 Protein MAK16 homolog yes no 0 0 0 1.5 0.5 1 1 49.118 49.15 3 4.2421E-05 14027 20230619_1880_Aki_TMTPro18x_K_F1 103.14 82.474 23962 20712 23489 23404 25506 26426 24421 25284 33797 28071 25685 28287 32110 25665 26496 34305 35177 37698 22161 18983 23926 23463 26309 26478 24976 25979 33578 28242 27028 28620 32305 27034 27563 34496 33591 35761 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110730000 25596 4467 24031 47995;47996 38689 38689 1 9606 Homo sapiens -0.007927856047444948 SSCPLANSQYATIKEEK Unmodified 1924.92 0.9200417 4467 Q9BXY0;A0PJ56;H0YBV6 MAK16 Protein MAK16 homolog yes no 0 0 1 8 0 1 48.178 48.236 3 2.8157E-18 12763 20230619_1888_Aki_TMTPro18x_K_F8 177.67 161.54 59369 57370 67590 62020 67380 76193 76326 76719 56663 75252 34116 27356 56646 24820 50535 42249 35099 21359 55022 52540 67949 62483 70171 75996 75846 78248 58140 74611 37041 29824 56635 26733 50589 41040 33637 20559 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33159000 25597 4467 24032 47997 38690 38690 1 9606 Homo sapiens -0.005421514583986209 SSCSFETCPRPTEK Unmodified 1684.7185 0.71850513 1541 J3KSW8;U6FSN9;A0A494BZV2;Q6WCQ1-3;Q6WCQ1;Q6WCQ1-2;Q8N236;B9EGI2 MPRIP;Mprip-Ntrk1 fusion gene Tyrosine-protein kinase receptor;Myosin phosphatase Rho-interacting protein yes no 0 0 1 6 0 1 38.273 38.355 3 1.1951E-05 8861 20230619_1886_Aki_TMTPro18x_K_F6 98.439 86.999 30882 20702 33485 33074 25397 28304 38247 44847 34611 37654 38285 37392 45169 38129 33216 44476 42834 40574 28544 19065 33681 32332 27339 29340 37737 44456 35625 38400 39397 38023 45317 39640 34578 44344 40874 38587 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50390000 25598 1541 24033 47998 38691 38691 1 9606 Homo sapiens -0.09646538695756135 SSDAFTTQHALR Unmodified 1332.6422 0.64222736 3350 Q59HG1;O95239;O95239-2;Q6PKB2 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 0 0 0 6 0 1 36.386 36.446 3 3.2776000000000003E-24 8121 20230619_1886_Aki_TMTPro18x_K_F6 212.93 163.21 26987 18147 28257 30246 28309 34491 28510 33323 39232 28275 27345 29662 30051 21376 25033 24606 28815 28069 24936 16722 28614 29588 29448 34499 29077 33975 38863 28901 28743 29752 30324 22519 25748 24872 27529 26626 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56208000 25599 3350 24034 47999 38692 38692 1 9606 Homo sapiens -0.010788064185817348 SSDDRNPMFLEK Oxidation (M) 1453.6507 0.65074314 4161 Q7Z2K8;Q7Z2K8-2 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes no 0 1 1 4 0 1 42.451 42.495 3 0.071067 10616 20230619_1883_Aki_TMTPro18x_K_F4 58.754 45.326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25600 4161 24035 48000 38693 38693 2681 1 9606 Homo sapiens -0.057936205642818095 SSDEATKPTPNPRPQSAR Unmodified 1937.9555 0.95551601 1321 A0A1W2PQQ1;Q5HYW2 NHSL2 NHS-like protein 2 yes no 0 0 2 7 0 1 31.115 31.213 4 1.6151E-06 5832 20230619_1887_Aki_TMTPro18x_K_F7 111.77 101.57 20595 13113 17090 12679 18701 21604 22196 24313 28851 18220 20647 25609 20436 20563 22977 23809 26295 23968 18991 12018 17654 12981 19418 21230 22377 24468 28647 18978 21601 25487 21016 21527 23506 23883 25110 22772 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25349000 25601 1321 24036 48001 38694 38694 1 9606 Homo sapiens 0.02405647113619125 SSDEAVILCK Unmodified 1120.5434 0.54342452 179 Q53GN6;A0A024R201;Q9UNM6;J3KNQ3;B2RBM7;Q9Y6E3;Q9UNM6-2;B4DJ66;H0YD73;E9PL38 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 4 0 1 49.309 49.347 2 0.00018995 13681 20230619_1883_Aki_TMTPro18x_K_F4 138.4 116.89 281210 218740 215170 225850 229150 248470 344550 342670 301630 296140 287150 271260 311980 246130 251830 324620 318490 292080 259440 200400 224440 228060 239920 251770 339270 342180 309130 300860 296280 275840 314700 258940 261210 322910 303900 277860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 429280000 25602 179 24037 48002 38695 38695 1 9606 Homo sapiens -0.012025457078379986 SSDGRPDSGGTLR Unmodified 1303.6117 0.61165551 1289 P55196-5;A8MQ02;P55196;P55196-1;H0Y8U8;A0A804HJ20;A0A1P7ZIN0;G1UI22;J3KN01;P55196-2;P55196-6;P55196-3;Q5TIG5 MLLT4 Afadin yes no 0 0 1 3 0 1 23.172 23.324 3 0.0082656 3838 20230619_1882_Aki_TMTPro18x_K_F3 69.229 46.755 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25603 1289 24038 48003 38696 38696 1 9606 Homo sapiens -0.02800584803617312 SSDRLDEAAQR Unmodified 1246.5902 0.59019179 4090 Q68CN2;Q71SV8;Q9HCS7 DKFZp762C1015;XAB2 Pre-mRNA-splicing factor SYF1 yes no 0 0 1 1.67 0.471 1 2 29.553 29.601 2;3 0.0061599 5569 20230619_1881_Aki_TMTPro18x_K_F2 93.096 66.498 20228 11928 19874 22603 23315 26385 25294 23488 28077 19668 32965 33358 30535 27324 27739 21506 35185 29213 18669 11018 20290 21975 24004 26306 25472 24109 28586 20514 33486 33036 31120 28070 28628 22164 33551 27687 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142910000 25604 4090 24039 48004;48005;48006 38697;38698 38698 2 9606 Homo sapiens -0.02323969832355033 SSDTNIFDSNVPSNK Unmodified 1623.7376 0.73764389 3006 Q6PJT7;Q6PJT7-5;G3V256;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-10;Q6PJT7-4;A0A3B3IT62;G3V572;G3V3Y4;G3V3R9;G3V240;G3V473 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 0 0 0 5 0 1 50.622 50.698 3 6.2656E-14 14045 20230619_1885_Aki_TMTPro18x_K_F5 173.25 161.09 45483 37764 48006 48333 43533 52562 51359 53624 48601 58297 52695 56020 62032 49599 52424 64991 57205 59538 42080 34659 48498 48005 45791 52839 51275 54823 49898 58567 54307 56755 62536 52199 53811 64722 54703 56599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82376000 25605 3006 24040 48007 38699 38699 1 9606 Homo sapiens -0.049275428088549234 SSDVSWSDTRR Unmodified 1294.5902 0.59019179 1699 A0A7P0T8N8;O14776-2;O14776;G3V220 TCERG1 Transcription elongation regulator 1 yes no 0 0 1 4.5 0.5 1 1 34.472 34.541 3 7.877E-07 7340 20230619_1883_Aki_TMTPro18x_K_F4 164.6 149.12 57156 43316 62289 62382 80031 72154 68797 67983 71236 65097 82268 71901 74632 64809 70376 57894 88257 69263 52866 39820 63093 61547 81271 72149 70115 69667 72851 66161 83484 72462 76226 66731 72544 58980 84139 65736 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107820000 25606 1699 24041 48008;48009 38700 38700 1 9606 Homo sapiens -0.04531969832351024 SSEAETQQPPAAPPAAPALSAADTK Acetyl (Protein N-term) 2447.1816 0.18161236 3745 P67809;Q6PKI6;Q7KZ24;C9J5V9;Q15905 YBX1;YB-1 Nuclease-sensitive element-binding protein 1 yes no 1 0 0 3 0 1 54.136 54.185 3 1.1418E-13 16010 20230619_1882_Aki_TMTPro18x_K_F3 89.365 75.35 16463 13218 14242 16033 11190 18906 18099 14828 23141 22322 19439 25739 33318 29226 15907 41451 37498 55168 15204 12126 14628 15994 12114 18792 17991 15642 23156 22282 20748 26108 32772 30701 17820 42129 35791 52189 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31836000 25607 3745 24042 48010 38701 38701 1 9606 Homo sapiens 0.015908816515548097 SSEEIESAFR Unmodified 1153.5251 0.52513192 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;A0A0D9SFH4;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 2 0.816 1 1 1 46.848 46.899 2 5.7323E-10 13000 20230619_1881_Aki_TMTPro18x_K_F2 213.85 178.41 679030 541360 609540 690050 657620 700740 735330 729520 833710 811330 826600 885540 901960 714470 807190 972850 962360 939170 627250 496890 626180 684770 681380 708500 739950 745570 843630 817730 852130 889870 913480 756430 831940 971070 919120 892470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 728890000 25608 1022;3868 24043 48011;48012;48013 38702;38703;38704 38703 3 9606 Homo sapiens -0.04548964358195917 SSEIEQAVQSLDR Unmodified 1460.7107 0.71070086 506 A0A024R897;B3KPC7;Q9BPX5 ARPC5L Actin-related protein 2/3 complex subunit 5;Actin-related protein 2/3 complex subunit 5-like protein yes no 0 0 0 3 0 1 57.188 57.221 3 7.0793E-08 17257 20230619_1882_Aki_TMTPro18x_K_F3 152.32 111.73 28902 23951 28676 34159 31969 35642 31803 30434 35594 33041 33898 40185 39201 30936 31494 40216 38037 43768 26725 22008 29231 33656 32947 35801 32195 31540 35987 33474 35129 40144 39464 32718 32571 40434 36370 41512 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72263000 25609 506 24044 48014 38705 38705 1 9606 Homo sapiens -0.0012260662938388123 SSELEGDTITLKPR Unmodified 1544.8046 0.80460124 320 Q7KZI7;Q7KZI7-7;A0A024R555;A0A7I2V3R3;A0A7I2YQR3;A0A140VJP1;A0A0A0MRU9;A8K2S4;E7ETY4;E9PC69;A9CP04;A0A024R5B2;Q7KZI7-8;Q7KZI7-13;Q7KZI7-12;Q7KZI7-2;Q7KZI7-9;Q7KZI7-11;Q7KZI7-6;Q7KZI7-15;Q7KZI7-14;Q7KZI7-10;Q7KZI7-3;Q7KZI7-4;Q7KZI7-16;Q7KZI7-5 MARK2;Par1b Serine/threonine-protein kinase MARK2 yes no 0 0 1 5 0 1 47.517 47.594 3 1.1626E-09 12735 20230619_1885_Aki_TMTPro18x_K_F5 168.67 146.8 68271 54321 69498 87182 69600 85016 78591 72524 85606 97662 95885 88979 94353 76640 82455 90635 84002 81891 63127 49994 70617 85233 72586 85792 78944 75668 87287 97080 97771 90293 95739 80216 84186 90356 80343 77881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50773000 25610 320 24045 48015 38706 38706 1 9606 Homo sapiens 0.05399112472900924 SSELQAIK Unmodified 874.476 0.47599688 2053 Q5QPL9;A8K4T9;Q53GL6;Q9UKM9-2;Q9UKM9;Q5QPM0 RALY RNA-binding protein Raly yes no 0 0 0 5.5 0.5 1 1 45.367 45.449 3 0.0018431 11867 20230619_1886_Aki_TMTPro18x_K_F6 110.31 60.27 182760 141860 162600 153010 197960 215950 206800 203050 262980 187410 179200 169990 190750 154760 176880 181350 223940 179190 168790 130010 167340 154520 203170 213330 209630 207830 261210 189880 188240 172890 193700 161610 182710 181700 213500 170380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164280000 25611 2053 24046 48016;48017 38707 38707 1 9606 Homo sapiens 0.033737921435204044 SSELVSANR Unmodified 961.48287 0.48287317 2788 CON__P41361 yes yes 0 0 0 4 0.816 1 1 1 34.402 34.468 2 2.2234E-08 7282 20230619_1883_Aki_TMTPro18x_K_F4 209.87 162.12 + 24555 16639 29574 42222 72835 83281 42656 46340 88006 117410 356440 607640 167070 262750 380030 70964 302630 397310 22719 15439 30354 40955 71531 80201 46327 52048 97259 129430 346760 581420 187220 271710 376730 93727 290960 373560 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 509120000 25612 2788 24047 48018;48019;48020 38708;38709;38710 38709 3 0.0005910502409278706 SSEMNVLIPTEGGDFNEFPVPEQFK Unmodified 2810.3109 0.31091197 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;B4DNY3;B4DNA3;B4DUZ8 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 0 0 5 0 1 64.292 64.336 3 0.056432 19844 20230619_1885_Aki_TMTPro18x_K_F5 39.21 25.146 8575.4 9170.6 8145.1 9968.6 6895.1 7548 9719.7 9675.6 10757 10803 9550.6 9698.9 9325.9 9709.9 9770.2 12068 13056 10928 7941.4 8396.4 8303 9974.2 7336.6 7869.9 9668.2 9770.7 10854 10823 9849.7 9898.4 9564.3 10132 10120 12020 12446 10399 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108890000 25613 2327 24048 48021 38711 38711 1 9606 Homo sapiens -0.021831047806699644 SSENFDELLK Unmodified 1180.5612 0.56118307 2949 P29762;F1T0F7 CRABP1 Cellular retinoic acid-binding protein 1 yes no 0 0 0 3 0.816 1 1 1 56.434 56.455 3 7.1378E-06 17163 20230619_1881_Aki_TMTPro18x_K_F2 157.75 123.37 494760 416960 456840 505540 787510 932280 634980 655280 740300 612960 616810 632800 708320 581440 662170 726790 631570 683870 457290 382450 472620 508520 788470 903700 652100 686980 743410 622880 642860 640010 717660 609190 672840 725460 604940 649800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 869220000 25614 2949 24049 48022;48023;48024 38712;38713;38714 38712 3 9606 Homo sapiens -0.02187507181338333 SSENPNEVFR Unmodified 1177.5364 0.53636531 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 2.5 0.5 1 1 39.395 39.457 2 1.2046E-05 9390 20230619_1882_Aki_TMTPro18x_K_F3 185.27 155.02 225210 169770 193070 219160 227770 251650 263800 243910 293370 269690 301870 295180 292490 259080 252940 319300 318330 307570 207890 155880 199520 217660 234890 251810 264720 250450 297420 272010 308830 297390 297070 271540 261880 319060 303870 292290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 424710000 25615 1213 24050 48025;48026 38715;38716 38716 2 9606 Homo sapiens -0.04530142264047754 SSEPPPPPQPPTHQASVGLLDTPR Acetyl (Protein N-term) 2546.2765 0.2765158 4711 Q9Y2V2;H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9 CARHSP1 Calcium-regulated heat stable protein 1 yes no 1 0 0 4 0 1 49.848 49.882 3 8.36E-14 13951 20230619_1883_Aki_TMTPro18x_K_F4 133.58 124.76 16752 12615 16356 19291 20828 23325 19818 21561 27168 23031 24204 21226 29450 25831 22488 29335 23133 25959 15479 11606 16734 18973 21270 23229 20267 22178 27140 23162 25174 21814 29563 26673 23064 29216 22146 24681 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130380000 25616 4711 24051 48027 38717 38717 1 9606 Homo sapiens 0.06522859913411594 SSEPVQHEESIR Unmodified 1396.6583 0.65827136 184 Q9UDY2-7;Q9UDY2;A0A1B0GTW1;Q9UDY2-3;A0A3B3ITE1;A0A024R233;A0A2R8YDH4;A0A3B3IRI3;B7Z954 TJP2 Tight junction protein ZO-2 yes no 0 0 0 1 0 1 29.955 29.955 3 8.283E-10 5971 20230619_1880_Aki_TMTPro18x_K_F1 176.05 141.33 6600 5048.5 3753.3 7202.4 10511 12304 8271.4 10046 11351 11964 10045 10902 8483.2 9110.5 10501 12463 13973 11995 6078.6 4640.3 4174.3 7152.4 10341 11997 8559.3 10458 11349 11957 10308 11052 8823.5 9625.9 10844 12438 13322 11405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14598000 25617 184 24052 48028 38718 38718 1 9606 Homo sapiens -0.024191449723275582 SSEQILATLK Unmodified 1088.6077 0.60773933 4685 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 7.5 0.5 1 1 55.704 55.766 3 9.9751E-06 16014 20230619_1888_Aki_TMTPro18x_K_F8 152.54 94.169 224470 192290 216920 232640 211410 266980 249000 243000 277460 218450 205730 167150 207300 163910 239120 210900 211280 181440 207560 176360 221050 232070 221330 266720 249730 249250 278050 220670 214370 172080 212950 171750 240890 209640 202210 172750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308910000 25618 4685 24053 48029;48030 38719 38719 1 9606 Homo sapiens 0.06697977440626346 SSERDQLRPGDESTPR Unmodified 1828.8664 0.86636665 2333 B4DYK9;B7ZMH1;B2RWN6;F5H1N7;B7ZVZ4;A0A2R8Y6P1;Q6ZU35;A0A024RD92 KIAA1211;hCG_39854 Uncharacterized protein KIAA1211 yes no 0 0 2 2.5 0.5 1 1 28.66 28.751 4 2.3108000000000003E-25 5312 20230619_1881_Aki_TMTPro18x_K_F2 219.97 196.49 17492 14645 17218 14939 17146 11865 15108 14161 16364 17388 22268 21091 20491 19184 20826 22950 26489 22467 16175 13411 17485 15041 17706 12315 15404 14405 16836 17509 22486 21193 21002 20039 21494 22970 25262 21359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70000000 25619 2333 24054 48031;48032 38720 38720 1 9606 Homo sapiens -0.014911878459088257 SSFADISNLLQIEPR Unmodified 1688.8733 0.87334951 3941 Q15785;Q6ZPD0;B4DXU3 TOMM34 Mitochondrial import receptor subunit TOM34 yes no 0 0 0 4.5 3.5 1 1 63.962 63.973 3 4.7109E-11 19526 20230619_1888_Aki_TMTPro18x_K_F8 164.15 132.32 34103 28794 28795 33661 27562 38251 36245 30179 42730 48298 43809 46500 54348 48399 37558 50262 53076 58139 31500 26401 29717 33647 29041 38136 36225 31891 43249 47802 45358 47327 54363 49971 39413 50882 50668 55118 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 275830000 25620 3941 24055 48033;48034 38721;38722 38722 2 9606 Homo sapiens 0.0564677677259624 SSFDQAER Unmodified 938.40937 0.40937388 2288 D3DWK1;B2RAR6;P29692-2;Q9BW34;E9PRY8;Q9H7G6;Q71RH4;A0A087X1X7;A0A8C8L741;E9PQR8;E9PN56;E9PRL0;E9PN71;E9PJV8 EEF1D Elongation factor 1-delta yes no 0 0 0 1.5 0.5 1 1 33.247 33.277 2 0.00047578 6972 20230619_1881_Aki_TMTPro18x_K_F2 163.15 127.66 105350 57081 127490 143900 52587 54018 73193 89792 82623 87725 140150 152870 117280 120020 115290 58132 167830 143330 97374 53020 126590 136880 61024 62148 73147 89369 85809 90665 140160 150940 120480 121610 119820 64391 159910 135320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 95732000 25621 2288 24056 48035;48036 38723;38724 38724 2 9606 Homo sapiens -0.06229443418374103 SSFESSCPQQWIK Unmodified 1582.7086 0.70859237 2535;4041 B4DM08;Q5JTJ3-3;Q5JTJ3;Q5JTJ3-2 COA6 Cytochrome c oxidase assembly factor 6 homolog no no 0 0 0 8 0 1 54.825 54.892 3 3.7096E-05 15663 20230619_1888_Aki_TMTPro18x_K_F8 114.76 102.6 80114 61112 72112 80214 82608 104730 82865 84134 102660 86085 93502 91548 97757 84681 87658 96034 98827 103840 73987 56120 74142 79723 85142 103520 84148 87417 103060 87122 96531 92483 99179 88184 89977 96739 94484 98524 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164640000 25622 2535;4041 24057 48037 38725 38725 1 9606 Homo sapiens -0.05945358638859943 SSFFIEPQKPVFPETR Unmodified 1907.9781 0.97814893 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 1 2 0 1 58.509 58.523 3 3.9586E-06 18015 20230619_1881_Aki_TMTPro18x_K_F2 113.48 103.38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25623 4372 24058 48038 38726 38726 1 9606 Homo sapiens 0.06047898249130412 SSFFSDR Unmodified 844.37153 0.37153181 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;B4DLU5;A0A2R8YDH3;B4E3C4;A0A2R8Y650;A0A2R8YCU0;A0A2R8YF89;B4DLA0;A0A087WX09 DDX3X ATP-dependent RNA helicase DDX3X yes no 0 0 0 6 0.816 1 1 1 44.504 44.587 2 0.0024616 11471 20230619_1886_Aki_TMTPro18x_K_F6 161.6 108.25 587950 421930 506360 548200 569840 574850 592960 611280 697440 645730 636590 563110 687180 511000 540080 688030 618080 563730 542620 387520 522300 543620 587390 580200 599780 622760 702250 648280 657550 574050 692290 538420 556890 681210 590240 536950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 647000000 25624 1018 24059 48039;48040;48041 38727;38728 38728 2 9606 Homo sapiens -0.05687909613186548 SSFLQVFNNSPDESSYYR Unmodified 2138.9545 0.95451296 2974 F5H365;Q15436;B4DSQ5;B4DF60;Q15436-2 SEC23A Protein transport protein Sec23A yes no 0 0 0 8 0 1 62.036 62.065 3 1.6728E-38 18630 20230619_1888_Aki_TMTPro18x_K_F8 248.97 243.26 47988 35662 37796 47444 45405 50350 48554 53773 55827 52994 56673 57120 58502 50550 54915 67004 53012 64206 44270 32757 39417 46970 46680 50761 49006 54662 56494 53720 58192 57610 59479 53220 55873 66874 50817 60972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 456750000 25625 2974 24060 48042 38729 38729 1 9606 Homo sapiens -0.06940612045900707 SSFNLGTIETK Unmodified 1195.6085 0.60846762 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 7.5 0.5 1 1 54.481 54.546 3 5.4891E-05 15481 20230619_1888_Aki_TMTPro18x_K_F8 129.74 111.13 110970 95587 107280 120570 119720 125650 113260 125190 127900 117370 129960 115010 135660 115140 126960 139570 137860 125090 102620 87702 109540 119770 123170 126680 115090 127690 129540 118990 133400 116990 137870 120050 129920 139030 131710 119010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154240000 25626 68 24061 48043;48044 38730 38730 1 9606 Homo sapiens 0.01848772089670092 SSFREEDNTYR Unmodified 1402.6113 0.61132116 1171 O43747-2;O43747;B3KXW5;A0A140VJE7;Q8IY97;B4DS96;H3BNR4;H3BUN9;H3BR36;B4DGE1;H3BS13;H3BN71;H3BRM7;H3BV30;H3BN75 AP1G1 AP-1 complex subunit gamma-1 yes no 0 0 1 2.5 0.5 1 1 32.79 32.855 3 2.7506E-12 6811 20230619_1881_Aki_TMTPro18x_K_F2 201 167.77 125960 95821 110270 113950 138620 130530 132060 137440 153300 141070 154960 159940 159330 129810 131890 188390 192000 157670 116300 87906 113740 113840 141450 130960 134210 140000 155030 142940 159100 160580 161210 137950 138210 186480 182880 150200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 322550000 25627 1171 24062 48045;48046 38731;38732 38731 2 9606 Homo sapiens -0.0738800452347732 SSFSESALEK Acetyl (Protein N-term) 1125.519 0.51898391 4574 Q9NQG5;E9PIQ9;E9PQF3 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes no 1 0 0 2 0 1 53.5 53.528 2 1.5307E-05 15956 20230619_1881_Aki_TMTPro18x_K_F2 85.731 79.366 82159 65792 75151 83431 86099 96749 90548 89312 109910 101430 101810 108380 114720 94974 99274 117390 116060 122850 75906 60384 77144 82968 88740 96644 91626 92080 110560 102100 105440 109250 115940 99616 102250 117860 110930 116600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118340000 25628 4574 24063 48047 38733 38733 1 9606 Homo sapiens -0.038754825897058254 SSFSITR Unmodified 796.40792 0.40791731 1525 A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 0 0 0 3.67 3.09 1 1 1 40.481 40.477 2 0.0010407 10034 20230619_1881_Aki_TMTPro18x_K_F2 130.04 28.348 382450 328630 382640 378260 463860 492720 477630 461840 573610 328870 310210 306450 313650 267770 385020 340270 398700 316630 353760 301250 389900 379540 475690 488900 483470 470340 567760 339290 331010 310980 323600 281310 390730 339630 380770 301290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 311050000 25629 1525 24064 48048;48049;48050 38734;38735;38736 38735 3 9606 Homo sapiens 0.0015696728351031197 SSFSYEPYYSTSYK Acetyl (Protein N-term) 1749.741 0.74099793 2388 B3KQI5;P07196;I6L9F6 NEFL Neurofilament light polypeptide no no 1 0 0 6 0 1 61.307 61.362 2 1.2824E-05 18694 20230619_1886_Aki_TMTPro18x_K_F6 83 77.028 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25630 2388 24065 48051 38737 38737 1 9606 Homo sapiens -0.10388292754851136 SSFTVDCSK Unmodified 1029.4437 0.44371047 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 FLNA;FLJ00119 Filamin-A yes no 0 0 0 6 0.816 1 1 1 44.056 44.144 2 1.8148E-08 11254 20230619_1886_Aki_TMTPro18x_K_F6 211.48 176.67 219300 146870 179580 196260 319460 325720 274080 278740 353580 254600 308610 326220 312530 262310 277200 243180 340960 324560 202240 134980 187930 195750 319550 318450 281270 287230 353620 260990 319000 325620 317210 271780 285800 249380 325500 307470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 277020000 25631 3484 24066 48052;48053;48054 38738;38739;38740 38739 3 9606 Homo sapiens -0.0698336332177405 SSFYPDGGDQETAK Unmodified 1500.6369 0.63686721 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8;Q9NYF8-4;E9PJA7;H0YF00 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 0 2.5 1.12 1 1 1 1 46.349 46.399 3 5.3919E-23 12478 20230619_1882_Aki_TMTPro18x_K_F3 203.29 182.91 304490 259020 279760 327650 345890 406630 350180 364580 433150 381270 388960 424640 423200 335430 361710 457310 433840 424790 281440 237670 287580 326190 354540 404130 355350 375740 434780 385840 402840 426100 427840 355410 373400 455490 414330 403840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 506410000 25632 4629 24067 48055;48056;48057;48058 38741;38742;38743 38742 3 9606 Homo sapiens -0.09342574791708103 SSFYVNGLTLGGQK Unmodified 1469.7514 0.75144346 3400 P07737;K7EJ44;I3L3D5 PFN1 Profilin-1 yes no 0 0 0 4 0 1 58.478 58.48 2 5.1376E-07 17686 20230619_1883_Aki_TMTPro18x_K_F4 172.13 123.84 30307 25524 26392 31010 29588 38667 28111 30109 37075 20849 19404 19939 18215 15131 29274 19513 18438 15833 27999 23412 27215 30954 30516 38305 28702 31102 36514 21575 20715 20123 19149 15994 28920 19367 17728 15087 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42463000 25633 3400 24068 48059 38744 38744 1 9606 Homo sapiens 0.03535779480898782 SSGAGGGSGSGGSGSGGLIGLMK Unmodified 1836.8636 0.86358946 1154 A0A0U1RR39;A0A1B0GW38;A0A0U1RQX8;P22681;A0A8V8TQA9 CBL E3 ubiquitin-protein ligase CBL yes no 0 0 0 2 0 1 54.477 54.501 3 3.6023E-20 16383 20230619_1881_Aki_TMTPro18x_K_F2 167.53 162.98 24968 19791 25137 24547 19059 22913 22489 21713 25584 31756 29042 32049 35672 27429 25804 33877 31360 34272 23084 18161 25425 24383 20387 23267 22589 22542 26066 31554 29935 32348 35709 28802 26765 33937 29972 32537 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44099000 25634 1154 24069 48060 38745 38745 1 9606 Homo sapiens -0.021367792950741205 SSGAPETLQR Unmodified 1044.52 0.51998696 4455 Q9BW92 TARS2 Threonine--tRNA ligase, mitochondrial yes yes 0 0 0 3.5 0.5 1 1 32.894 32.958 2 3.5303E-05 6672 20230619_1882_Aki_TMTPro18x_K_F3 161.79 116.11 40243 25226 51738 53147 76442 81562 61832 70384 63909 46054 74159 79942 67305 65756 72179 34213 86784 83051 37245 23335 51980 51690 76993 80001 63288 71997 65314 48901 75363 79079 69202 66645 73895 37753 82867 78378 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113080000 25635 4455 24070 48061;48062 38746;38747 38746 2 9606 Homo sapiens -0.0004922343014186481 SSGASVTTQPTEFK Unmodified 1438.694 0.69398816 4336 Q96DI9;Q9BY77;F6VRR5;B4E0L0;Q9BY77-2 POLDIP3 Polymerase delta-interacting protein 3 yes no 0 0 0 6 0 1 44.807 44.896 3 9.0293E-09 11644 20230619_1886_Aki_TMTPro18x_K_F6 128.54 115.66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25636 4336 24071 48063 38748 38748 1 9606 Homo sapiens -0.007811075153767888 SSGDGTEWAEPITFPSGGGK Unmodified 1978.8909 0.89085007 1887 A0AV58;Q13033-2 STRN3 Striatin-3 yes no 0 0 0 4.5 0.5 1 1 59.384 59.412 3 1.1561E-07 17658 20230619_1885_Aki_TMTPro18x_K_F5 98.165 88.634 34192 26951 31071 35323 25452 37920 32952 35697 38631 38530 34460 37326 46550 38773 37032 42534 41845 47420 31586 24746 31776 35010 27175 38066 32979 36692 38890 38759 36097 37991 46672 40164 38121 42940 40030 44967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33542000 25637 1887 24072 48064;48065 38749 38749 1 9606 Homo sapiens -0.059439724830781415 SSGEIVYCGQVFEK Unmodified 1601.7396 0.73955814 3788 Q02543;M0R3D6;M0R1A7;B4DM94;M0R117;B4DM74;B4DUV3;B2R4C0;Q53HD3;M0R0P7 RPL18A 60S ribosomal protein L18a yes no 0 0 0 6 0.816 1 1 1 54.299 54.369 3 5.8551E-09 15719 20230619_1886_Aki_TMTPro18x_K_F6 142.39 119.25 373280 294090 311840 377960 329930 359990 354100 351330 385130 334970 266790 252200 425670 290370 311330 436400 387340 421250 344610 269980 322530 374470 342050 365190 356550 359160 386120 337050 286120 261460 423630 306430 323480 434890 370110 400140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5353900000 25638 3788 24073 48066;48067;48068 38750;38751 38751 2 9606 Homo sapiens -0.037242053246473006 SSGFLPASQQACAK Unmodified 1450.6875 0.68746299 2449 B3LEU8;Q6NUQ4-2;Q6NUQ4;B4DKI3;H7C008;Q8N3H6;B2RD07 TMEM214;DKFZp761L1314 Transmembrane protein 214 yes no 0 0 0 1 0 1 46.809 46.809 3 0.0004037 13038 20230619_1880_Aki_TMTPro18x_K_F1 101.32 80.069 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25639 2449 24074 48069 38752 38752 1 9606 Homo sapiens -0.01985323947701545 SSGGFVWACK Unmodified 1097.4964 0.49641475 3600 Q53GL5;P48735;P48735-2;Q13584;B4DSZ6;H0YL11 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] yes no 0 0 0 2.5 0.5 1 1 52.967 53.013 2 0.00019575 15502 20230619_1882_Aki_TMTPro18x_K_F3 138.1 98.389 409050 351420 372320 382000 425520 547000 483480 486830 513050 306690 273450 227190 269240 242550 409230 298130 312700 242000 378080 321980 382290 385540 440000 539030 484830 496490 510870 317620 291730 235130 281720 252570 407700 295960 299630 230710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 246290000 25640 3600 24075 48070;48071 38753 38753 1 9606 Homo sapiens -0.04843360468339597 SSGGREDLESSGLQR Unmodified 1576.7441 0.74412625 4675;4676 Q9UK76;J3KT51;Q9UK76-2;Q9UK76-3;J3KSH8 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed no no 0 0 1 4.5 1.71 1 1 1 1 1 1 33.283 33.349 3 4.3151E-33 6894 20230619_1882_Aki_TMTPro18x_K_F3 247.9 212.9 561630 436370 452950 482650 518150 550850 582130 533420 646330 596170 664610 604310 697100 543010 539920 838160 700170 589820 518330 400020 470340 484690 534890 551650 585060 547910 655370 599540 681860 611870 702790 577550 562270 822750 667600 563250 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 4343100000 25641 4675;4676 24076 48072;48073;48074;48075;48076;48077 38754;38755;38756;38757 38755 4 9606 Homo sapiens -0.021176048574943707 SSGIHVALVTGGNK Acetyl (Protein N-term) 1380.7361 0.73612775 1468 A0A384NL53;P16152;E9PQ63;A8MTM1;P16152-2 CBR1 Carbonyl reductase [NADPH] 1 yes no 1 0 0 8 0 1 48.496 48.563 2 2.5833E-11 12926 20230619_1888_Aki_TMTPro18x_K_F8 72.2 35.805 26806 16500 29397 34658 32227 35945 30649 34448 21173 35273 28476 44146 31122 24569 31270 33092 37373 57742 24768 15264 29720 33485 33176 36182 30734 35318 22484 35814 29111 43673 31678 26486 32148 34476 35841 54508 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42300000 25642 1468 24077 48078 38758 38758 1 9606 Homo sapiens 0.060989126837057483 SSGLPNIPVQTISR Unmodified 1467.8045 0.80454166 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 2.5 0.5 1 1 52.546 52.605 2 7.6779E-16 15268 20230619_1882_Aki_TMTPro18x_K_F3 241.15 193.95 208530 180020 187470 179610 150560 194830 137650 129210 172090 124980 109950 92175 116900 89875 115090 139110 110490 89213 192730 164820 191550 181700 159330 194410 140710 136530 170830 125720 115930 95116 118970 95382 116940 136150 105610 85342 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 891720000 25643 1817 24078 48079;48080 38759;38760 38760 2 9606 Homo sapiens 0.08935157263567817 SSGPTSLFAVTVAPPGAR Unmodified 1713.905 0.90498399 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;A0A1W2PP22 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 4.17 0.687 1 3 2 59.106 59.13 2;3 9.4892E-40 17866 20230619_1883_Aki_TMTPro18x_K_F4 266.97 238.76 179160 150580 175900 180220 162960 183870 190760 187090 199970 198430 206920 199340 234300 184860 215180 225670 208350 227690 165670 138100 178790 179660 171050 185750 191070 191240 203510 199960 213150 201920 237230 193410 218840 226210 199550 216170 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5938199999.999999 25644 3776 24079 48081;48082;48083;48084;48085;48086 38761;38762;38763;38764;38765 38762 5 9606 Homo sapiens 0.07658769526551623 SSGPYGGGGQYFAK Unmodified 1374.6204 0.62042929 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;Q0VAC0;A0A7I2YQX9;B4E0B5;Q32P51;A0A024QZ98;B4DP35;H0YH80;Q3MI39;A0A7I2V334;A0A7I2V2R4;A0A7I2V3K5;A0A7I2V661;A0A7I2V453;A0A7I2YQY2;A0A7I2V520;A0A7I2V459;A0A7I2V4P7;A0A7I2V360;A0A7I2V4F8;A0A7I2V2Q7;A0A7I2V4E2;A0A7I2V666;A0A7I2V5P1;A0A7I2V2X1;A0A7I2V2M7;A0A7I2V5N7;A0A7I2V3U8;A0A7I2V2F1;A0A7I2V497 HNRNPA1;HNRPA1;HNRNPA1L2;RP11-78J21.1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 0 0 0 2.8 2.64 2 2 1 48.012 48.052 2;3 2.6178E-08 13576 20230619_1880_Aki_TMTPro18x_K_F1 196.11 169.6 2224200 1774400 2053600 2245200 2053600 2321500 2280800 2416700 2567500 2636600 2868000 2590300 3117800 2416700 2705800 3364000 2871000 2868900 2055000 1628500 2101500 2229800 2140200 2343700 2296300 2467800 2611900 2651100 2937300 2628700 3152800 2549200 2771500 3335600 2745300 2730200 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 25991000000 25645 640 24080 48087;48088;48089;48090;48091 38766;38767;38768;38769 38767 4 9606 Homo sapiens -0.051896111671339895 SSGPYGGGGQYFAKPR Unmodified 1627.7743 0.77430417 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A7I2YQX9;B4E0B5;B4DP35;H0YH80;Q3MI39;A0A7I2V334;A0A7I2V2R4;A0A7I2V3K5;A0A7I2V661;A0A7I2V453;A0A7I2YQY2;A0A7I2V520;A0A7I2V459;A0A7I2V4P7;A0A7I2V360;A0A7I2V4F8;A0A7I2V2Q7;A0A7I2V4E2;A0A7I2V666;A0A7I2V5P1;A0A7I2V2X1;A0A7I2V2M7;A0A7I2V5N7;A0A7I2V3U8;A0A7I2V2F1;A0A7I2V497 HNRNPA1;HNRPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 1 5 0 1 43.602 43.682 3 1.1866E-26 11079 20230619_1885_Aki_TMTPro18x_K_F5 241.41 223 33781 51238 75953 52635 110480 43935 81672 54206 19223 49518 60688 41319 38733 26083 141250 39358 37765 36912 31726 46849 73932 53023 110340 45579 82110 54632 24920 49933 59470 41864 44920 28146 135550 39526 37127 35088 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53524000 25646 640 24081 48092 38770 38770 1 9606 Homo sapiens -0.014472014016291723 SSGQGIDPMLLLTNLGMIK Unmodified 1987.0482 0.048219106 231 B6ETL5;A0A024R397;Q96RD7-2;Q96RD7 PANX1 Pannexin;Pannexin-1 yes no 0 0 0 4 0 1 66.649 66.662 3 0.025935 21079 20230619_1883_Aki_TMTPro18x_K_F4 46.702 30.937 2844.7 2687.6 1932.2 3812.1 2301.9 3494.9 3145.5 3131.3 2785.8 2955.1 4461.2 3420.7 3050 3765.6 2960.7 3392.9 4117.4 5328.6 2626 2468.3 2057.4 3748.4 2392.7 3546.1 3111.6 3221.7 2920.9 3010.6 4429.2 3468.3 3161.6 3851.2 3079.1 3522.1 3936.7 5036.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2695800 25647 231 24082 48093 38771 38771 1 9606 Homo sapiens 0.0941769253113307 SSGQSAQLLSHEPGDPPCLR Unmodified 2135.0066 0.006565301 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 5 0 1 44.116 44.195 3 2.5283E-16 11261 20230619_1885_Aki_TMTPro18x_K_F5 160.27 147.89 23919 17437 23868 27721 25590 26729 25703 27120 28180 26657 28535 24686 28410 24642 24727 32443 31741 33099 22102 16052 24297 27120 26436 27104 25997 27668 28582 26909 29226 25181 28836 25836 25639 32487 30311 31426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107240000 25648 4222 24083 48094 38772 38772 1 9606 Homo sapiens -0.015537719038547948 SSGSALTVWGTGNPR Unmodified 1488.7321 0.732105 1246 A0A140VKC8;Q13630;E9PKL9 TSTA3 GDP-L-fucose synthase yes no 0 0 0 3 0 1 48.505 48.584 2 0.00033379 13505 20230619_1882_Aki_TMTPro18x_K_F3 104.24 87.612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25649 1246 24084 48095 38773 38773 1 9606 Homo sapiens 0.007288231899792663 SSGSPYGGGYGSGGGSGGYGSR Unmodified 1909.7827 0.7826966 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4G0;B4E036;Q66K53;Q8NFG3;H7C1J8;P51991-2;B4DDB6;B4E3E6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 7.2 0.748 1 2 2 37.952 37.987 2;3 1.0526000000000001E-95 8620 20230619_1888_Aki_TMTPro18x_K_F8 268.49 264.78 89632 62666 81749 95018 98984 95886 102390 100080 95033 134330 152970 156470 165010 135840 132770 170110 171540 174900 82745 57663 84028 93267 101410 96998 102850 102890 99693 134500 154750 157170 166470 142630 137920 170550 163780 166050 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3643399999.9999995 25650 1469;2450 24085 48096;48097;48098;48099;48100 38774;38775;38776;38777 38777 4 9606 Homo sapiens -0.13580344013644208 SSGSSSSGLGTVSNSPASQR Unmodified 1851.8559 0.85586154 1788 H0Y589;A0A8J8YW94;H0Y3N9;Q9UPP1-5;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1 PHF8 Histone lysine demethylase PHF8 yes no 0 0 0 7 0 1 35.175 35.246 3 8.3036E-10 7406 20230619_1887_Aki_TMTPro18x_K_F7 126.8 118.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25651 1788 24086 48101 38778 38778 1 9606 Homo sapiens -0.03599215290955726 SSGSSYPSLLQCLK Unmodified 1525.7446 0.74464352 2772 CON__P00761 yes yes 0 0 0 3 0 1 59.613 59.642 2 5.5379E-08 18260 20230619_1882_Aki_TMTPro18x_K_F3 175.15 151.3 + 16886 8484.8 12401 16471 21170 19139 24053 18952 20415 11762 12554 11207 8897.9 9623.9 14191 13964 11951 8843.7 15542 7847.8 13129 15994 21334 19141 23940 19197 20659 12269 13098 11367 9466.4 10191 14213 13680 11434 8465.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2971000 25652 2772 24087 48102 38779 38779 1 0.0028009853801904683 SSGTASSVAFTPLQGLEIVNPQAAEK Unmodified 2601.3286 0.32861095 2904 E7EVX8;Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes no 0 0 0 8 0 1 63.193 63.216 3 5.8491E-21 19206 20230619_1888_Aki_TMTPro18x_K_F8 166.01 156.59 29780 22981 25941 31734 28523 30827 30207 28094 28313 31157 32673 33229 35452 31166 30324 37905 39140 45096 27498 21114 26744 31300 29462 31176 30305 28989 29145 31385 33444 33580 35866 32582 31456 38358 37405 42734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124280000 25653 2904 24088 48103 38780 38780 1 9606 Homo sapiens 0.09199978536526032 SSGVPVDGFYTEEVR Unmodified 1640.7682 0.76821573 4063 Q5TDE9;Q9BSD7;Q5TDF0 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase yes no 0 0 0 2.5 0.5 1 1 52.388 52.437 2 6.8085E-42 15209 20230619_1882_Aki_TMTPro18x_K_F3 283.44 259.41 83842 73645 65385 75323 73738 82217 70636 70642 74711 93083 92763 86310 106790 79222 89977 105910 91652 95415 77421 67434 68131 76042 75904 82396 71560 73571 76716 92642 94889 87729 107650 83412 91973 105370 87702 90723 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 243220000 25654 4063 24089 48104;48105 38781 38781 1 9606 Homo sapiens -0.026537644238260327 SSIAGSSTWER Unmodified 1179.552 0.55201537 1329 A0A220K8H0;Q99808;Q99808-2 SLC29A1 Equilibrative nucleoside transporter 1 yes no 0 0 0 6 0 1 41.146 41.241 2 1.0131E-09 10045 20230619_1886_Aki_TMTPro18x_K_F6 213.8 164.37 68391 58447 71055 58002 34175 38460 57338 61615 56979 95166 93464 85946 99831 77717 67373 97000 105020 81335 63277 53510 71317 58462 39021 40956 56563 62231 59658 93996 94359 87397 100110 81477 71311 96210 99952 77506 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54429000 25655 1329 24090 48106 38782 38782 1 9606 Homo sapiens -0.030578557470107626 SSIGTGYDLSASTFSPDGR Acetyl (Protein N-term) 1958.8858 0.88576469 1225 Q6IB71;A0A140VK43;P25788-2;P25788;G3V3W4;G3V5N4 PSMA3 Proteasome subunit alpha type;Proteasome subunit alpha type-3 yes no 1 0 0 3.5 0.5 1 1 61.714 61.731 2 2.7585E-14 19056 20230619_1883_Aki_TMTPro18x_K_F4 157.56 153.38 34381 23822 26679 33621 29665 34837 26412 32369 38774 41045 40216 41179 40984 34814 42381 45144 41074 49595 31702 21902 27824 33145 30554 35066 27223 33457 38885 41017 41238 41580 41868 36678 43018 45437 39371 47027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64825000 25656 1225 24091 48107;48108 38783 38783 1 9606 Homo sapiens -0.05532276345684295 SSILLDVKPWDDETDMAK Unmodified 2061.9929 0.9928723 271 A0A024R3W7;P24534;A4D1M6 EEF1B2;LOC392793 Elongation factor 1-beta yes no 0 0 1 4.5 1.12 1 1 1 1 61.687 61.721 3 0.00027923 19161 20230619_1882_Aki_TMTPro18x_K_F3 78.501 63.887 39701 30053 29446 35416 26096 40702 34882 36383 38348 45550 44952 46921 47338 39507 40922 52598 46600 55835 36615 27569 30766 35390 27730 40631 34781 37707 39165 45570 45924 47321 47929 41700 42107 52787 44596 52964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 511600000 25657 271 24092 48109;48110;48111;48112 38784 38784 1 9606 Homo sapiens 0.0043555754432418325 SSILLDVKPWDDETDMAK Oxidation (M) 2077.9878 0.98778692 271 A0A024R3W7;P24534;A4D1M6 EEF1B2;LOC392793 Elongation factor 1-beta yes no 0 1 1 6 0 1 60.796 60.854 3 1.5963E-06 18486 20230619_1886_Aki_TMTPro18x_K_F6 111.63 95.321 164100 123670 136800 171640 142440 156120 158290 150750 166990 181340 191960 184130 202010 168870 152850 236990 206240 231220 151460 113650 141520 169110 147980 158910 158970 155280 170710 181700 196110 186430 203540 178320 159720 236450 196980 219580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100250000 25658 271 24092 48113 38785 38785 161 1 9606 Homo sapiens -0.008087463182619103 SSILPFTPPIVK Acetyl (Protein N-term) 1339.7751 0.77513901 366 A0A024R5Z3;P84022 SMAD3 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 3 yes no 1 0 0 3 0 1 65.954 65.991 2 0.00035488 20929 20230619_1882_Aki_TMTPro18x_K_F3 68.735 50.12 11221 9697.5 9654.7 7531.8 9822.7 11307 11875 13417 13761 11026 12178 13575 13824 12214 13364 13264 13210 15535 10367 8862.4 9929.5 7853.5 10254 11202 11915 13485 13840 11350 12653 13619 14038 12699 13589 13440 12657 14723 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23370000 25659 366 24093 48114 38786 38786 1 9606 Homo sapiens 0.11884244985367332 SSIPITVR Unmodified 871.51272 0.51271674 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 1.5 0.5 1 1 43.346 43.387 2 0.00056579 11377 20230619_1881_Aki_TMTPro18x_K_F2 161.11 114.74 492430 367980 375720 429860 425850 509670 475730 450660 555120 546360 611550 573890 607070 488600 486760 637710 609570 563080 454200 337560 392530 430050 440410 507940 479160 467080 563210 547960 624160 578750 613870 514680 504690 633850 581720 535780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 598630000 25660 2188 24094 48115;48116 38787;38788 38788 2 9606 Homo sapiens 0.071820887600893 SSISSVLK Unmodified 819.47018 0.47018322 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;P51114-3;B4DM21;B4DGH9;E7EU85;H7C4S4 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 0 2 0 1 48.383 48.454 3 0.018333 13718 20230619_1881_Aki_TMTPro18x_K_F2 75.738 61.744 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25661 1029 24095 48117 38789 38789 1 9606 Homo sapiens 0.05322693631853781 SSLAEYFK Unmodified 943.4651 0.46509784 4657 Q9UBU9;E9PIN3;Q68CW9 NXF1;DKFZp667O0311 Nuclear RNA export factor 1 yes no 0 0 0 4.5 3.5 1 1 56.31 56.338 2;3 0.0020362 16275 20230619_1888_Aki_TMTPro18x_K_F8 133.12 86.049 140480 122200 139340 147360 144230 168390 160120 157680 165280 167700 159610 148150 174050 136520 165370 169490 164660 166130 129940 112070 141780 147030 149900 168420 160710 162080 167950 168350 164620 150940 176670 143030 168290 169600 157560 157830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 115290000 25662 4657 24096 48118;48119 38790;38791 38791 2 9606 Homo sapiens -0.008896102307630827 SSLDNIEMAYAR Oxidation (M) 1384.6293 0.62927941 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2;H3BP95;H3BMX0 NUP93 Nuclear pore complex protein Nup93 yes no 0 1 0 4 0 1 49.63 49.665 2 0.056554 13813 20230619_1883_Aki_TMTPro18x_K_F4 59.013 52.708 55369 49183 48121 59218 59546 57011 61572 62589 62083 64680 76509 69355 71114 62010 65507 78091 77919 74117 51170 45100 49717 58950 60936 57976 61991 63618 63793 65379 77534 70006 72498 65041 67465 77958 74406 70452 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54118000 25663 4222 24097 48120 38792 38792 2707 1 9606 Homo sapiens -0.047650055930034796 SSLDNIEMAYAR Unmodified 1368.6344 0.63436479 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2;H3BP95;H3BMX0 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 4.5 0.5 1 1 52.35 52.398 2 3.1282E-09 15121 20230619_1883_Aki_TMTPro18x_K_F4 176.45 156.15 119950 99727 112130 128480 116480 139400 125200 125730 145290 155940 141100 142280 159950 131470 138540 160780 155800 156020 110870 91532 114740 127500 121000 139790 126370 130200 146840 155570 145790 144670 161610 137560 142330 160770 148910 148230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132970000 25664 4222 24097 48121;48122 38793;38794 38793 2 9606 Homo sapiens -0.03520701730371911 SSLEELHGDANWGEDLR Unmodified 1926.8708 0.87078333 151 Q9UH99-2;Q9UH99;B4E2A6;A0A024R1P7;A0A8I5QKM0;Q9UH99-3;B0QY60;A0A024R1S6;B0QY66;B0QY67;B0QY68 SUN2;UNC84B SUN domain-containing protein 2 yes no 0 0 0 2.5 0.5 1 1 51.484 51.539 3 0.014908 15155 20230619_1881_Aki_TMTPro18x_K_F2 50.819 43.617 31455 26524 32429 31582 31884 39256 38834 38861 44348 39406 44006 34445 39051 35165 35331 37433 42053 39501 29098 24324 32859 31590 33379 39094 38924 39728 44825 39659 44880 35252 39854 36373 36374 37694 40154 37506 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158140000 25665 151 24098 48123;48124 38795 38795 1 9606 Homo sapiens -0.055577234230213435 SSLESIPLTLLPAAAAAGAAAASGGEEGVGGAGGR Unmodified 3035.5524 0.55235631 4213 Q8IYI6 EXOC8 Exocyst complex component 8 yes yes 0 0 0 8 0 1 65.232 65.252 4 0.055831 20071 20230619_1888_Aki_TMTPro18x_K_F8 40.146 31.437 11527 12752 13946 12095 12673 14096 13869 13871 16037 14279 18554 17303 17320 16358 15899 16244 15110 17957 10701 11661 13936 12309 13292 14105 13989 14197 16302 14506 18854 17404 17654 16892 16152 16423 14485 17027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13732000 25666 4213 24099 48125 38796 38796 1 9606 Homo sapiens 0.11600222179959019 SSLFELAK Unmodified 893.48583 0.48583328 124 Q8NCD8;A0A024R124;F8VX04;Q9H2H9 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 0 0 0 1 0 1 57.816 57.816 2 0.029599 17645 20230619_1880_Aki_TMTPro18x_K_F1 80.438 41.646 56569 42165 58423 56600 32280 44925 49257 47272 52656 62640 61355 60115 68119 51225 60428 77211 76795 77018 52293 38733 58794 55830 36119 46346 48835 48573 53837 62381 62830 60871 68914 54546 62578 77099 73321 73153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131190000 25667 124 24100 48126 38797 38797 1 9606 Homo sapiens 0.03482980148908155 SSLGPVGLDK Unmodified 971.52876 0.52876073 3470 P17987;E7ERF2;F5H136;F5GZI8;F5H726;F5H676;F5GYL4 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 6.71 1.03 1 2 2 2 49.97 50.048 2;3 1.9154E-05 13590 20230619_1887_Aki_TMTPro18x_K_F7 187.5 136.54 1337700 1090700 1177900 1279900 1295100 1490400 1350300 1329800 1510000 1554200 1593900 1607400 1747700 1396600 1472300 1848700 1597500 1618000 1235700 1000200 1212300 1279800 1338400 1487500 1363400 1375600 1533300 1560400 1638000 1622700 1765100 1471500 1511000 1836600 1527400 1539100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2413200000 25668 3470 24101 48127;48128;48129;48130;48131;48132;48133 38798;38799;38800;38801 38800 4 9606 Homo sapiens 0.041857502063294305 SSLGQSASETEEDTVSVSK Unmodified 1939.8858 0.88582427 3850 Q13435;E9PPJ0;Q7Z3K9;E9PJ04;H0YCG1 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 0 2 0 1 47.229 47.305 3 4.2266E-07 13191 20230619_1881_Aki_TMTPro18x_K_F2 99.409 84.155 141680 109440 145220 149940 148000 172380 156040 141470 175810 175900 177850 182810 194040 174090 146190 298270 243770 261610 130980 100550 147310 148340 153800 171850 157480 147640 178130 176190 183060 185250 195460 186330 155740 295160 232410 248800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181000000 25669 3850 24102 48134 38802 38802 1 9606 Homo sapiens -0.046523211363592054 SSLGQSASETEEDTVSVSKK Unmodified 2067.9808 0.98078729 3850 Q13435;E9PPJ0;Q7Z3K9;E9PJ04;H0YCG1 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 1 4 0 1 45.858 45.901 3 0.063977 12113 20230619_1883_Aki_TMTPro18x_K_F4 36.481 25.536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25670 3850 24103 48135 38803 38803 1 9606 Homo sapiens -0.0104838766519606 SSLGSLQTPEAVTTR Unmodified 1545.7999 0.79985021 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;A0A7P0T8C6;Q7Z2W4-3;Q05DV5 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 0 7 0 1 47.218 47.306 3 6.2542E-05 12340 20230619_1887_Aki_TMTPro18x_K_F7 96.247 71.956 47142 41528 45566 46871 55052 57773 58629 53360 79618 50683 49269 52186 60182 44430 51928 53555 50808 53333 43600 38058 46573 47051 56540 57508 59506 54754 78639 51478 52471 52643 60646 46601 52896 53658 48641 50649 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121970000 25671 2740 24104 48136 38804 38804 1 9606 Homo sapiens 0.04878228330107959 SSLINSLK Unmodified 860.49673 0.49673232 598 A0A6I8PS19;A0A6I8PL80;Q05DU1;A0A024R9Y6;Q9NVN8 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes no 0 0 0 2.33 0.471 2 1 51.919 51.971 2 0.00065452 15002 20230619_1882_Aki_TMTPro18x_K_F3 179.17 0 216030 183880 206150 219200 211250 244320 228580 215800 254280 235310 221720 225270 281830 211010 209020 296300 283600 270210 199730 168620 210400 218800 219610 244500 230260 223010 256380 236540 231620 228800 282170 222760 218420 294640 270530 256980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222110000 25672 598 24105 48137;48138;48139 38805;38806 38806 2 9606 Homo sapiens 0.06090382523188964 SSLLDDLLTESEDMAQR Unmodified 1921.8939 0.89388653 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;O00429-7;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402 DNM1L Dynamin-1-like protein no no 0 0 0 2.5 0.5 1 1 65.585 65.606 3 7.7077E-07 20799 20230619_1882_Aki_TMTPro18x_K_F3 117 110.83 4987.1 3847.5 4963.7 4681.2 4302 5485.8 4598.9 4470.2 6297.3 5198.1 4040.2 4079 5076.5 4592.6 5356 5633.2 6207.5 6207.5 4609.6 3530.3 5032.8 4670.1 4537.9 5461.5 4672.5 4656.3 6230.1 5185.5 4298.8 4209.8 5166.2 4777.1 5489.7 5675 5931.1 5889.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12213000 25673 3212;3213 24106 48140;48141 38807 38807 1 9606 Homo sapiens -0.030184654205413608 SSLLLGFR Unmodified 891.5178 0.51780212 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 4.5 0.5 1 1 56.844 56.877 2 0.016131 16587 20230619_1885_Aki_TMTPro18x_K_F5 92.47 75.506 290450 253710 270330 250420 278700 390540 312230 316460 408310 111630 110340 106520 105320 93638 201040 127160 131490 110990 268530 232250 276410 255160 290590 382410 315630 322850 397630 124270 127200 108180 112340 98749 198490 126580 126340 105660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 357810000 25674 1723 24107 48142;48143 38808;38809 38809 2 9606 Homo sapiens 0.06770392622706822 SSLLVGNLK Unmodified 929.55458 0.55458155 952 B3KPJ4;B4DG61;B7ZLY0;A0A0A0MSI2;A0A994J5J9;Q8IXK0-2;Q8IXK0-4;Q8IXK0;Q8IXK0-5;Q8IXK0-3 PHC2 Polyhomeotic-like protein 2 yes no 0 0 0 3 0 1 53.763 53.815 3 0.0002032 15877 20230619_1882_Aki_TMTPro18x_K_F3 125.82 48.971 32260 28146 30965 34150 33197 41321 31448 31611 42130 38193 39706 42263 36525 37128 36782 44058 46237 44589 29833 25813 31617 34079 34319 41009 32147 33145 42213 38392 40731 42541 37447 38804 37960 44173 44136 42352 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44382000 25675 952 24108 48144 38810 38810 1 9606 Homo sapiens 0.08698644448611503 SSLNPILFR Unmodified 1045.592 0.59202969 619 A0A0C4DGS1;A0A024RAD5;P39656;P39656-3;U3KQ84;P39656-2 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 0 4.5 0.5 1 1 55.132 55.171 2 3.1498E-05 16281 20230619_1883_Aki_TMTPro18x_K_F4 185.05 131.16 685760 655080 674000 648490 756390 1037000 850550 854840 1069900 268350 246580 224940 232420 209170 571210 271990 274140 233720 634670 599500 687110 660890 783610 1014500 858190 869930 1042000 302980 291740 230440 254020 219540 556810 271150 264880 222540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 234330000 25676 619 24109 48145;48146 38811 38811 1 9606 Homo sapiens 0.07105735714230832 SSLPNFK Unmodified 791.41775 0.41775372 2117 A8K885;Q9UNH7;A0A0A0MRI2;H0YJF8;G3V4Z5;G3V5U2 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 2 0 1 48.572 48.637 2 0.022901 13801 20230619_1881_Aki_TMTPro18x_K_F2 107.67 35.535 292300 240850 282580 303010 299930 263230 319230 314180 312720 443930 497480 461490 481050 377970 436090 537730 507180 457040 270220 221010 288160 300460 310070 270600 320750 320960 326760 441860 500730 465140 489100 401090 448710 532990 484230 435140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218560000 25677 2117 24110 48147 38812 38812 1 9606 Homo sapiens 0.013701552888960578 SSLQSQCLNEVLK Unmodified 1504.7555 0.75554256 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 7.5 0.5 1 1 53.198 53.27 3 2.763E-06 15035 20230619_1887_Aki_TMTPro18x_K_F7 135.02 107.68 461490 369130 441240 480170 429570 477330 461890 473700 509610 558330 490050 499050 516610 443910 588380 528040 525740 537010 426510 338880 449940 475720 448080 482800 465490 486440 516170 557810 505210 507260 529790 464260 593240 530020 503700 509920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1875699999.9999998 25678 3881 24111 48148;48149 38813;38814 38813 2 9606 Homo sapiens 0.02335500912272437 SSLQYSSPAPDGCGDQTLGDLLLTPTR Unmodified 2848.3549 0.35490205 3488 Q3B7A7;Q59HH3;P22102;B4DJ93 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 6 0 1 62.722 62.773 3 1.4891E-50 19364 20230619_1886_Aki_TMTPro18x_K_F6 241.69 235.7 33703 25451 31938 31697 27442 33390 31126 29702 33872 39304 37387 42108 43264 36408 36695 43522 42139 45899 31136 23360 32522 31522 28989 33547 31271 30865 34529 39286 38482 42407 43656 38125 37768 43734 40291 43556 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290770000 25679 3488 24112 48150 38815 38815 1 9606 Homo sapiens 0.004658796456169512 SSLSEYAFR Acetyl (Protein N-term) 1100.5138 0.51383895 1937 Q3KRB4;A4D1T3;Q9Y291 MRPS33 28S ribosomal protein S33, mitochondrial yes no 1 0 0 3 0 1 55.967 56.004 2 0.0010246 16770 20230619_1882_Aki_TMTPro18x_K_F3 88.954 85.698 87120 59623 65591 80687 70414 73456 70405 69832 133160 54647 50782 45927 56304 44177 49621 61354 56396 55771 80310 54796 68567 79627 72916 74745 72852 71222 128570 55965 56160 47016 56998 46556 51014 61029 53890 53033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22633000 25680 1937 24113 48151 38816 38816 1 9606 Homo sapiens -0.03239741661673179 SSLYCSDIGK Unmodified 1128.5121 0.51212439 4364 Q96HY7;H7C1J3 DHTKD1 Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial yes no 0 0 0 7 0 1 47.403 47.491 3 0.00059582 12423 20230619_1887_Aki_TMTPro18x_K_F7 105.98 83.982 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25681 4364 24114 48152 38817 38817 1 9606 Homo sapiens -0.04699118741928032 SSMNPEYDYLFK Acetyl (Protein N-term);Oxidation (M) 1550.6599 0.65991084 3725 Q5U0I6;P62820;B7Z8M7;E7END7;P62820-2;P62820-3 RAB1A Ras-related protein Rab-1A yes no 1 1 0 3.5 0.5 1 1 62.861 62.879 2 3.1179E-07 19545 20230619_1883_Aki_TMTPro18x_K_F4 90.629 72.014 102820 83001 94233 106460 92227 103420 103960 106800 103830 131700 140610 132170 143730 121370 111100 158380 133590 152400 95006 76185 96483 105540 96282 104890 104200 109540 107360 131720 142580 133870 145030 127510 115060 158080 127730 144740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 178020000 25682 3725 24115 48153;48154 38818;38819 38819 2406 2 9606 Homo sapiens -0.09339271998601362 SSMNPEYDYLFK Acetyl (Protein N-term) 1534.665 0.66499622 3725 Q5U0I6;P62820;B7Z8M7;E7END7;P62820-2;P62820-3 RAB1A Ras-related protein Rab-1A yes no 1 0 0 4 0.816 1 1 1 64.051 64.079 2 9.4905E-07 20034 20230619_1883_Aki_TMTPro18x_K_F4 90.629 71.016 60895 50326 61625 66088 48754 59537 61457 56744 63751 94370 77751 82119 87721 74393 73438 97345 86749 99777 56317 46201 62378 65353 52035 60631 61331 59191 65538 92934 79574 83618 88538 78231 75801 97511 82962 94695 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162030000 25683 3725 24115 48155;48156;48157 38820;38821 38821 2 9606 Homo sapiens -0.08094968135992531 SSMNVDEAFSSLAR Oxidation (M) 1528.6828 0.68277155 646 A0A024RB27;Q504R6;P51153;A0A087WWB9 hCG_24991;RAB13 Ras-related protein Rab-13 yes no 0 1 0 5 0 1 51.538 51.613 2 2.0336E-07 14442 20230619_1885_Aki_TMTPro18x_K_F5 134.49 122.76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25684 646 24116 48158 38822 38822 385 1 9606 Homo sapiens -0.06042252881115928 SSMNVDEAFSSLAR Unmodified 1512.6879 0.68785692 646 A0A024RB27;Q504R6;P51153;A0A087WWB9 hCG_24991;RAB13 Ras-related protein Rab-13 yes no 0 0 0 6 0 1 57.136 57.208 2 3.6276E-08 16967 20230619_1886_Aki_TMTPro18x_K_F6 154.09 138.46 86822 73252 83138 85369 73265 120800 98691 89942 116520 107970 86751 97712 117120 92183 84975 110990 109720 114920 80269 67161 84688 85670 77908 118660 98546 94494 116560 107900 91788 99419 117030 96327 88480 111370 104780 109090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40924000 25685 646 24116 48159 38823 38823 1 9606 Homo sapiens -0.04797949018507097 SSMTFLTR Unmodified 941.46405 0.46405199 4728 Q9Y3I0;B4DNA0 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 3 0 1 47.646 47.725 2 0.0025474 13079 20230619_1882_Aki_TMTPro18x_K_F3 124.98 81.86 254830 207110 229210 214400 247050 308940 293870 285640 336090 152040 144780 149380 137990 139850 220240 188130 190050 140850 235430 189710 235240 217310 256830 304620 294700 289790 331760 161100 157490 151640 145220 146940 220650 185770 181790 134460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199090000 25686 4728 24117 48160 38824 38824 1 9606 Homo sapiens -0.009021478713179931 SSNAETLY Unmodified 883.39233 0.39232683 180 V9HWJ8;A0A024R203;P61289;P61289-3;P61289-2;K9J957;Q6FHK7;B3KQ25;K7ESG5;J7FRP4 HEL-S-283;PSME3 Proteasome activator complex subunit 3 yes no 0 0 0 2 0 1 45.342 45.423 2 0.001939 12300 20230619_1881_Aki_TMTPro18x_K_F2 134.66 131.54 110960 81852 97593 111290 114470 115590 110220 119990 135030 156370 199700 191740 196030 162020 140590 167120 205030 198150 102440 75205 100570 110010 117430 116680 112230 123230 138760 157110 201530 192040 197530 168420 147630 169530 195500 187900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 307770000 25687 180 24118 48161 38825 38825 1 9606 Homo sapiens -0.05403364024186885 SSNCTSTTAVAVAPLSASK Acetyl (Protein N-term) 1892.915 0.91495633 3755 P78356;P78356-2 PIP4K2B Phosphatidylinositol 5-phosphate 4-kinase type-2 beta yes no 1 0 0 7 0 1 53.722 53.789 3 0.013785 15249 20230619_1887_Aki_TMTPro18x_K_F7 47.397 38.798 29113 23389 24019 27648 28389 30339 32777 27507 40341 30692 32347 35498 34260 29328 31926 36567 35617 37997 26878 21451 24914 27605 29274 30418 33000 28403 40320 31018 33670 35606 34804 30837 32736 36696 34059 36066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80568000 25688 3755 24119 48162 38826 38826 1 9606 Homo sapiens 0.004215446789885391 SSNECFK Acetyl (Protein N-term) 912.36473 0.36473187 1099 A0A0S2Z4Q3;A0A0S2Z4K2;P62633-2;P62633-8;P62633-5;P62633;P62633-4;P62633-6;P62633-7;P62633-3;A0A0S2Z4P7;D6RAT4 CNBP Cellular nucleic acid-binding protein yes no 1 0 0 1.5 0.5 1 1 41.584 41.622 2 0.0052308 10562 20230619_1881_Aki_TMTPro18x_K_F2 64.776 55.536 371580 209490 408400 376160 412510 653310 384070 451620 471560 342890 505970 642910 483240 502260 526690 251090 604850 561460 343210 193400 411870 369430 429030 634040 392000 472200 476180 361810 517570 633370 496630 509270 537510 274750 577660 530140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 605810000 25689 1099 24120 48163;48164 38827 38827 1 9606 Homo sapiens -0.09495590556059597 SSNNDDEDLTPEQK Unmodified 1590.6645 0.66453852 1275 P15884-3;A0A1B0GVR6;P15884-13;P15884-4;P15884-11;E9PH57;H3BTP3;P15884-2;A0A1B0GWD5;A0A1B0GW91 TCF4 Transcription factor 4 yes no 0 0 0 1 0 1 40.576 40.576 3 7.7009E-09 10362 20230619_1880_Aki_TMTPro18x_K_F1 131.53 127.56 42990 31011 41625 40166 49598 51611 47145 46804 55064 49946 63074 63782 63435 50880 61138 48320 71313 63206 39712 28480 42504 39963 50808 51214 47932 48230 55943 50737 64361 63665 64603 52803 62692 49479 68078 59905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49106000 25690 1275 24121 48165 38828 38828 1 9606 Homo sapiens -0.10716716322144748 SSNPSISDDSYFR Unmodified 1473.6372 0.63720156 458 A8K5G0;A0A024R7K0;M0R2Z9;Q8IX01-4;Q8IX01-3;Q8IX01;M0R3F6;M0R065;M0R216 SFRS14;SUGP2 SURP and G-patch domain-containing protein 2 yes no 0 0 0 3.5 0.5 1 1 46.455 46.498 2 2.8545E-10 12420 20230619_1883_Aki_TMTPro18x_K_F4 172.17 165.15 21117 14553 18234 22138 18836 20455 22766 19866 22205 22910 24317 26807 28096 22471 22933 28141 30789 30370 19485 13392 18796 21698 19620 20793 22705 20436 22744 23106 25031 26888 28308 23630 23872 28296 29380 28823 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25394000 25691 458 24122 48166;48167 38829;38830 38830 2 9606 Homo sapiens -0.08067155071853449 SSNSLVFQTLPR Unmodified 1347.7147 0.71466402 4347 Q99575;Q96F88;E5RK39 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 0 3 0 1 52.568 52.627 3 6.9618E-10 15336 20230619_1882_Aki_TMTPro18x_K_F3 180.24 152.07 29733 25223 31128 38444 33818 41232 39387 30082 43441 37356 34767 31566 36014 24293 37611 35618 36261 28986 27510 23193 31600 37735 35089 41205 39484 31735 43672 37212 36124 32066 36752 25922 38129 35249 34657 27628 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99066000 25692 4347 24123 48168 38831 38831 1 9606 Homo sapiens 0.05471527655004138 SSNTYTLTDVR Unmodified 1255.6044 0.60444487 3867 Q13740-2;F5GXJ9;Q13740 ALCAM CD166 antigen yes no 0 0 0 5 0.816 1 1 1 42.449 42.522 2 1.5528E-16 10541 20230619_1886_Aki_TMTPro18x_K_F6 248.14 216.21 186810 116500 153800 189280 304250 332780 326390 314110 388330 274190 202990 218100 352660 207510 195210 385270 278380 246310 172230 107350 161580 186870 304810 325010 329260 320880 384710 277790 223490 223900 347250 224060 206900 375920 265320 235530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 700490000 25693 3867 24124 48169;48170;48171 38832;38833 38833 2 9606 Homo sapiens -0.01313317404060399 SSNTYTLTDVRR Unmodified 1411.7056 0.7055559 3867 Q13740-2;F5GXJ9;Q13740 ALCAM CD166 antigen yes no 0 0 1 4.5 3.5 1 1 37.035 37.028 3 5.1095E-18 8781 20230619_1880_Aki_TMTPro18x_K_F1 200.21 179.82 192990 164280 186690 162310 296170 252830 285510 298220 277480 226230 217320 191460 235940 165820 223810 240580 237400 186360 178450 150400 191640 165500 298000 250060 288130 299340 280730 231410 226500 195300 239440 175950 228620 237490 226660 177760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 229800000 25694 3867 24125 48172;48173 38834;38835 38834 2 9606 Homo sapiens 0.01617134298635392 SSPAAKPGSTPSRPSSAK Unmodified 1711.8853 0.88531118 702 A0A024RC33;Q15555-4;Q15555-5;Q15555-3;Q15555;K7EL66;K7ERD8;Q15555-2 MAPRE2 Microtubule-associated protein RP/EB family member 2 yes no 0 0 2 4.5 0.5 1 1 32.915 32.985 4 5.5122E-05 6771 20230619_1885_Aki_TMTPro18x_K_F5 94.387 81.554 78761 52838 80618 81633 73886 72970 78729 81150 81997 94212 108790 82812 101300 71342 90674 60574 90962 60706 72761 48640 81626 79948 77326 74629 79270 82689 84445 94122 109850 84203 102980 73484 92222 61177 86820 57769 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52466000 25695 702 24126 48174;48175 38836;38837 38837 2 9606 Homo sapiens 0.05784393515796182 SSPCIHYFTGTPDPSR Unmodified 1820.8152 0.8151827 897 A0A090N7T9;Q12765;Q12765-2;A0A024RA21;Q12765-3;B4DH22;B4DIV7 SCRN1 Secernin-1 yes no 0 0 0 8 0 1 44.268 44.287 3 4.5044E-08 11192 20230619_1888_Aki_TMTPro18x_K_F8 125.75 78.829 32104 24595 34434 38523 42789 34101 37494 37680 33472 34590 41178 41298 34338 27282 35067 34992 39807 34433 29692 22632 34917 37686 43514 34921 38006 38180 34642 35300 41595 41145 35283 29012 35905 35013 38004 32730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130860000 25696 897 24127 48176 38838 38838 1 9606 Homo sapiens -0.06239228144340814 SSPEPVALTESETEYVIR Unmodified 2005.9844 0.9844161 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 3 0 1 57.189 57.221 3 5.336799999999999E-19 17322 20230619_1882_Aki_TMTPro18x_K_F3 160.64 131.34 122550 113450 129830 133500 127260 160120 161890 165520 178150 159590 147860 159090 172630 175110 165320 173330 174440 183870 113470 104000 131320 133570 133440 159970 161710 168510 179360 161650 154340 162060 175270 179910 168790 174800 166880 174490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253420000 25697 4753 24128 48177 38839 38839 1 9606 Homo sapiens 0.021663268993961537 SSPEVSSINQEALVLTAK Unmodified 1871.984 0.98402217 2877 E5RGS9;Q9NRG0 CHRAC1 Chromatin accessibility complex protein 1 yes no 0 0 0 6.5 0.5 1 1 59.717 59.771 3 1.5461E-14 17710 20230619_1887_Aki_TMTPro18x_K_F7 167.29 157.54 22068 21456 22401 23158 21722 29106 25031 23444 27206 25249 26605 24331 26451 20764 28617 27829 25982 29043 20432 19649 22730 23330 22745 28846 25115 24392 27563 25401 27312 24636 27089 21923 28913 27921 24906 27561 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139810000 25698 2877 24129 48178;48179 38840 38840 1 9606 Homo sapiens 0.08290951970161586 SSPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR Unmodified 3483.6251 0.62508033 3569 P40222 TXLNA Alpha-taxilin yes yes 0 0 1 3 0 1 39.509 39.563 4 1.7796E-10 9431 20230619_1882_Aki_TMTPro18x_K_F3 105.19 100.52 3775.7 2947.5 3090.6 3725 3636.5 3548.1 4362.5 2803.7 4664.2 4449.9 3031.8 5640.2 4964.5 3660 3058.8 4909 5514.6 2704.4 3485 2705.4 3208.7 3694.1 3751 3586.4 4359.8 2966.6 4674.8 4445.9 3288.5 5592.8 4914.9 3903.7 3288.3 4785.7 5233.2 2602.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122720000 25699 3569 24130 48180 38841 38841 1 9606 Homo sapiens -0.017387205553404783 SSPGQTPEEGAQALAEFAALHGPALR Unmodified 2604.2932 0.29322849 307 A0A024R4U3;Q14166;Q9BR23 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 6.5 0.5 1 1 61.716 61.763 3 7.388400000000001E-29 18570 20230619_1887_Aki_TMTPro18x_K_F7 183.15 168.15 134600 94063 132830 139970 126310 130670 145440 164850 138100 167600 165330 164810 171820 122970 174520 182880 196200 206790 124330 86534 135010 137470 132110 133590 145420 166050 142340 168990 168680 166060 175140 131560 178660 184090 187580 196120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 306020000 25700 307 24131 48181;48182 38842;38843 38843 2 9606 Homo sapiens 0.05525360799401824 SSPGTQDLLGIQTGMMAPENK 2 Oxidation (M) 2206.0246 0.024583131 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B4DL23;B4DS35 CEP170 Centrosomal protein of 170 kDa yes no 0 2 0 6 0 1 52.857 52.934 3 5.044E-08 15194 20230619_1886_Aki_TMTPro18x_K_F6 100.67 90.914 15230 12494 15399 15387 16244 16893 18430 14771 15373 17794 20908 19286 16541 15413 17896 17786 16611 20511 14085 11463 15642 15322 16844 16924 18361 15331 16057 17861 20995 19382 17088 16150 18105 17989 15933 19438 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17162000 25701 1960 24132 48183 38844 38844 1242;1243 1 9606 Homo sapiens -0.030188177640411595 SSPQFGVTLLTYELLQR Unmodified 1951.0415 0.041477469 4002 Q53GR7;Q9UJS0;Q9UJS0-2;B7Z2E2 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes no 0 0 0 3.5 0.5 1 1 65.053 65.075 3 0.08725 20542 20230619_1882_Aki_TMTPro18x_K_F3 35.625 16.894 9657.6 8152 10746 10611 7992.3 8310 8727.3 9327.1 9814.7 17407 14661 17285 17121 15278 15573 14722 15644 20240 8940.2 7482.5 10780 10487 8533.2 8605.4 8804.5 9674.9 10169 17140 14941 17458 17323 15805 15863 15115 14999 19148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39221000 25702 4002 24133 48184;48185 38845 38845 1 9606 Homo sapiens 0.10399838966418429 SSPSGPSNPSNPSVEEK Unmodified 1698.7697 0.7696723 1583 A0A5F9ZHY7;Q8WY22 BRI3BP BRI3-binding protein yes no 0 0 0 3 0 1 38.741 38.795 3 2.4266E-13 9087 20230619_1882_Aki_TMTPro18x_K_F3 147.7 126.64 15389 10068 14943 16019 18742 16742 17139 18556 21232 18707 22140 23332 23089 19855 18608 20798 31265 27534 14209 9272.7 15275 15692 19100 16918 17506 18833 21428 19040 22717 23356 23338 20653 19708 21255 29766 26094 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31823000 25703 1583 24134 48186 38846 38846 1 9606 Homo sapiens -0.05176175125689042 SSPSVKPAVDPAAAK Unmodified 1423.7671 0.76709352 4103 Q6FI81-3;Q6FI81;H3BV90;H3BT65;H3BPG7 CIAPIN1 Anamorsin yes no 0 0 1 1 0 1 43.288 43.288 3 1.7991E-07 11537 20230619_1880_Aki_TMTPro18x_K_F1 125.33 94.103 81709 58426 66181 81170 86163 99372 85183 87483 107640 105330 107550 109770 110500 83605 88543 109030 102210 86898 75375 53701 68919 80293 88001 98799 86627 90654 108410 105630 110460 110330 111580 88451 91286 107880 97552 82827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94466000 25704 4103 24135 48187 38847 38847 1 9606 Homo sapiens 0.07216065997954502 SSPVDLVTATDQK Unmodified 1359.6882 0.6881745 489 A0A024R830;A0A140VJL8;P29218;P29218-3;H0YBL1;E5RG94;E5RHE9;E5RI82;E5RGY4;P29218-2;E5RIF4;E5RG13;E5RIP7 IMPA1 Inositol monophosphatase 1 yes no 0 0 0 5 0 1 52.533 52.607 3 5.5349E-06 14878 20230619_1885_Aki_TMTPro18x_K_F5 123.95 102.44 68861 54772 63813 70634 49415 65228 69453 63857 83222 67811 76971 76011 92371 93562 76837 108390 93535 98474 63624 50280 65084 69952 53117 66309 69289 65484 83689 68643 79927 77488 93173 96628 79505 108040 89366 93618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122640000 25705 489 24136 48188 38848 38848 1 9606 Homo sapiens 0.02271793973000058 SSPVEALK Unmodified 829.45453 0.45453316 4103 Q6FI81-3;Q6FI81;H3BV90;H3BT65;H3BUG4;B4DHB9;H3BPG7;H3BQ23 CIAPIN1 Anamorsin yes no 0 0 0 6.5 0.5 1 1 45.675 45.762 2 0.0015284 12005 20230619_1886_Aki_TMTPro18x_K_F6 153.78 76.88 166520 106820 127420 160300 148960 186430 176490 173420 264840 217200 215510 244200 282910 217980 163150 330210 323330 317840 153470 98324 133260 157710 154200 186110 178960 179240 262760 218140 226390 245920 280980 231730 177770 328770 307780 302040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184480000 25706 4103 24137 48189;48190 38849 38849 1 9606 Homo sapiens 0.032984071148121075 SSPVEFECINEK Unmodified 1437.6446 0.64459513 561 O75131;A0A024R994;Q05DL8;H0YB26 CPNE3 Copine-3 yes no 0 0 0 4 0.816 1 1 1 51.736 51.792 3 1.6543E-07 14806 20230619_1883_Aki_TMTPro18x_K_F4 132.56 114.43 135130 113770 142990 146250 133330 158130 157680 156940 180830 167910 176910 168870 170790 145210 162680 194040 199110 187210 125030 104410 144500 145190 139980 158930 158310 160700 182700 169160 181380 170680 174170 153140 167750 193730 190070 177930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 384700000 25707 561 24138 48191;48192;48193 38850 38850 1 9606 Homo sapiens -0.05672138795785031 SSPVVNDGVVR Unmodified 1127.5935 0.59348625 753 A0A024RD99;B7Z2D8;B7Z5F9;B3KP14;H0Y8R1;B7Z3R7;H0YAK1;B3KW50;Q12849-5;Q12849;H0YAM1 GRSF1 G-rich sequence factor 1 yes no 0 0 0 4.5 0.5 1 1 38.745 38.812 2 5.6981E-12 9037 20230619_1885_Aki_TMTPro18x_K_F5 204.64 136.42 233480 193400 211960 221620 242560 266820 257850 251370 316750 295090 332060 364350 362440 294500 307440 378940 379580 350120 215740 177300 217630 222130 250060 266080 260900 259050 319910 298030 341470 364380 366300 310500 317960 377640 362270 332960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 398870000 25708 753 24139 48194;48195 38851;38852 38852 2 9606 Homo sapiens 0.03479325012335721 SSPYPTDVAR Unmodified 1091.5247 0.52473799 2470 Q02218;Q02218-2;E9PDF2;B4DF00;E9PCR7;B4DH65;A2VCT3;A2VCT2;B4E3E9;B4DK55;E9PFG7;B4DZ95;Q9ULD0;Q9ULD0-3;Q9ULD0-2 OGDH;OGDHL 2-oxoglutarate dehydrogenase, mitochondrial;2-oxoglutarate dehydrogenase-like, mitochondrial yes no 0 0 0 4 0 1 38.178 38.221 2 2.1245E-05 8800 20230619_1883_Aki_TMTPro18x_K_F4 184.36 147.65 64142 47668 63808 69488 80239 86090 86913 80149 97576 71626 97790 98246 88846 81800 88430 89423 104010 94954 59273 43830 65139 68569 82204 85633 87540 82088 98674 73704 99942 98009 90999 85279 90790 90059 99299 90163 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80359000 25709 2470 24140 48196 38853 38853 1 9606 Homo sapiens -0.01736339287390365 SSQAFFSK Unmodified 900.43413 0.43413207 1803 A0A8Q3WK70;B3KPV5;O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes no 0 0 0 2 0 1 48.223 48.294 2 0.010727 13643 20230619_1881_Aki_TMTPro18x_K_F2 98.249 42.866 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25710 1803 24141 48197 38854 38854 1 9606 Homo sapiens -0.020067635449890986 SSQALLSQLYQSPNR Unmodified 1690.8638 0.86384745 1058 P26378-4;A0A494C0F8;P26378;P26378-3;P26378-1;P26378-5;P26378-2;A0A494C147;B1APY9;A0A494C1D9;A0A0R4J2E6;B7Z5E0;A0A494C015 ELAVL4 ELAV-like protein 4;ELAV-like protein yes no 0 0 0 3 1 1 1 54.815 54.833 3 5.8746E-11 16181 20230619_1883_Aki_TMTPro18x_K_F4 162.7 141.05 809580 596790 643130 708940 793430 699680 816310 769500 875380 837410 865680 835130 999410 760570 761280 1044800 1027900 901920 746860 547560 669610 706820 811850 710430 823400 783270 888290 842610 894090 845990 1004100 802250 794530 1036500 980010 858620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 386720000 25711 1058 24142 48198;48199 38855 38855 1 9606 Homo sapiens 0.046050084871012587 SSQALLSQLYQSPNRR Unmodified 1846.965 0.96495848 1058 P26378-4;A0A494C0F8;P26378;P26378-3;P26378-1;P26378-5;P26378-2;A0A494C147;B1APY9;A0A494C1D9;A0A0R4J2E6;B7Z5E0;A0A494C015 ELAVL4 ELAV-like protein 4;ELAV-like protein yes no 0 0 1 7 0 1 49.063 49.148 3 1.2897E-42 13194 20230619_1887_Aki_TMTPro18x_K_F7 230.82 176.32 153760 136660 156580 204650 162860 173580 192940 183410 179920 190540 183270 166850 190920 165710 180350 219190 210170 203200 142280 125620 159220 200550 169330 178060 192390 186990 184260 191430 188140 170570 194170 173790 185440 218390 200750 193190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 652300000 25712 1058 24143 48200 38856 38856 1 9606 Homo sapiens 0.0753546018979705 SSQESIVCELR Unmodified 1306.6187 0.61871473 4624 Q9NXV6;B3KTW3 CDKN2AIP CDKN2A-interacting protein yes no 0 0 0 3 0 1 46.02 46.098 2 0.00017062 12389 20230619_1882_Aki_TMTPro18x_K_F3 155.33 120.07 46218 42786 41487 47075 51700 61348 53887 56598 57800 66082 74747 82097 64427 59909 60073 66469 79332 94724 42735 39195 42735 47382 52995 60843 54341 58385 59358 66730 75485 81815 65921 62890 62266 68243 75825 89613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43198000 25713 4624 24144 48201 38857 38857 1 9606 Homo sapiens -0.022329882474423357 SSQFGSLEF Unmodified 1000.4502 0.45017606 490 A0A024R832;Q8NHZ8 CDC26 Anaphase-promoting complex subunit CDC26 yes no 0 0 0 4 0 1 62.641 62.646 2 1.0092E-06 19448 20230619_1883_Aki_TMTPro18x_K_F4 143.61 128.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25714 490 24145 48202 38858 38858 1 9606 Homo sapiens -0.05003102098748968 SSQGTSYDSYR Unmodified 1249.5211 0.52110917 3106 Q9HC39;Q9HBB9;I3L2C7;Q8WUM5;P57678 GEMIN4 Gem-associated protein 4 yes no 0 0 0 3.5 0.5 1 1 33.946 34.006 2 2.8777E-39 7120 20230619_1883_Aki_TMTPro18x_K_F4 294.24 266.07 30651 20093 26312 34523 39557 41436 33668 35702 46597 37984 41030 40359 40091 36165 35668 30778 50767 36618 28274 18525 27334 33728 39900 41226 34680 36925 46500 38364 42304 40699 40769 37159 37145 31369 48329 34770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44678000 25715 3106 24146 48203;48204 38859 38859 1 9606 Homo sapiens -0.09367053851906348 SSQLLEPAVEETTKK Unmodified 1658.8727 0.87268081 4290 Q8WYP5;Q8WYP5-3;Q8WYP5-2;B3KVE5;B3KRD0;B3KTD2 AHCTF1 Protein ELYS yes no 0 0 1 5 0 1 49.481 49.557 3 0.00091947 13552 20230619_1885_Aki_TMTPro18x_K_F5 78.848 67.08 60082 49973 57761 63789 53414 66206 65147 63201 67865 88176 85957 90695 102070 79312 75307 107110 101970 97081 55544 45862 58852 63309 56194 66680 65114 65451 69809 87814 88053 91576 102360 83677 78692 106530 97275 92333 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28234000 25716 4290 24147 48205 38860 38860 1 9606 Homo sapiens 0.06959937332885602 SSQPLASK Unmodified 816.43413 0.43413207 733 B4DWA0;A0A024RCT9;P17096;P17096-3;A0A669KAX1;A0A994J705;A0A994J434;A0A1W2PRV2 HMGA1 High mobility group protein HMG-I/HMG-Y no no 0 0 0 7.5 0.5 1 1 37.342 37.367 2 0.002618 8237 20230619_1887_Aki_TMTPro18x_K_F7 123.86 67.313 51272 27876 78995 76534 79383 80695 70876 92512 61219 52026 95259 108620 64564 70651 88814 32408 104830 89550 47522 25939 77914 73278 82030 81460 71797 92588 64156 56400 94929 106310 68124 72075 90442 36578 100040 84506 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69271000 25717 733 24148 48206;48207 38861;38862 38861 2 9606 Homo sapiens 0.018572364549982012 SSQPPADRDPAPFR Unmodified 1539.743 0.74300404 2834 D3DWL9;Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes no 0 0 1 4.5 0.5 1 1 35.227 35.296 3 6.4455E-05 7638 20230619_1885_Aki_TMTPro18x_K_F5 110.15 86.401 32244 21934 35036 36285 35837 42487 41077 40702 42554 34638 47708 48782 43651 35655 38168 32701 49198 45773 29805 20209 35386 35526 37309 42419 41168 41551 43421 35763 48531 48423 44413 37072 39482 33663 46942 43349 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 74928000 25718 2834 24149 48208;48209 38863 38863 1 9606 Homo sapiens -0.005277744357499614 SSQPQAGSQGPQTFR Unmodified 1574.7437 0.74373232 136 A0A7P0TAH4;A0A7P0Z4K4;A8K0I0;A0A024R1C1;A0A7P0TA15;Q13356;A0A7P0TB19;A0A7P0T8E8;Q13356-2 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes no 0 0 0 7 0 1 35.081 35.153 3 8.641E-26 7337 20230619_1887_Aki_TMTPro18x_K_F7 190.18 176.44 6486 5961.2 6586.7 10333 8558.5 11058 8716.6 9508.7 10802 9061.6 10485 12486 12913 9976.6 8344.8 9517.9 12895 10102 6002.8 5489.2 6737.7 10071 8753.2 11080 8843.7 9811.9 10870 9289.2 10886 12426 12881 10352 8821.3 9604 12275 9599.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30028000 25719 136 24150 48210 38864 38864 1 9606 Homo sapiens -0.020649797866781228 SSQQPSTPQQAPPGQPQQGTFVAHK Unmodified 2630.2837 0.28372644 2587 E7ERS3;B4DTK7;Q86VM9;H3BRH3;B3KRL4 ZC3H18;NHN1 Zinc finger CCCH domain-containing protein 18 yes no 0 0 0 8 0 1 40.913 40.905 4 2.829E-05 9854 20230619_1888_Aki_TMTPro18x_K_F8 85.573 75.785 5315.3 2087.3 5220.8 7089.3 4506.9 5797.5 5660.8 6202.1 7158 6482.5 7522.4 6364.3 7714.6 6119.3 5946.3 7892.8 5339 5232.6 4898.2 1956.5 5312.9 6718.6 4777.6 5957.5 5689.7 6317.4 7217.7 6534.1 7698.5 6466.2 7778.1 6411.6 6055.4 7749.9 5113.4 4998.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43828000 25720 2587 24151 48211 38865 38865 1 9606 Homo sapiens 0.03379592513829266 SSQQPVSEVSTIPCPR Unmodified 1770.857 0.85704752 1588 Q15154;Q15154-5;H0YBA1;D3DSQ0;A0A5H1ZRS1;B9EIS5;A2RUU9;Q15154-2;Q15154-4;A0A4W8VX11;A0A088AWL4;B4DJ00;B4DWY1 PCM1 Pericentriolar material 1 protein yes no 0 0 0 6 0 1 44.454 44.543 3 1.7799E-14 11513 20230619_1886_Aki_TMTPro18x_K_F6 141.86 128.98 87183 71723 92943 99497 104930 103690 112090 102560 120280 101480 118950 118960 109680 99386 122900 109490 115390 112520 80662 65884 94150 98233 108110 104520 112830 104870 121940 103170 121750 119320 112890 103660 124250 110090 110460 106850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66999000 25721 1588 24152 48212 38866 38866 1 9606 Homo sapiens 0.0024532754418942204 SSQSSSQQFSGIGR Unmodified 1454.675 0.67498405 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;Q9UQL5 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 5.33 3.09 1 1 1 37.641 37.658 2 1.7676000000000002E-69 9046 20230619_1880_Aki_TMTPro18x_K_F1 340.88 289.45 239790 195980 220050 227150 254380 267730 241070 242530 283090 278130 320400 331750 327590 273040 283720 355350 359050 331570 221580 179690 225700 227410 261160 267160 245210 250470 287520 280820 327320 332450 332050 287870 293820 354240 342620 315280 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 573570000 25722 1328 24153 48213;48214;48215 38867;38868;38869 38867 3 9606 Homo sapiens -0.0341664408640554 SSQSSVTVENASKPDFTK Unmodified 1910.9222 0.92215019 4249 Q8ND82;Q9UJJ2 ZNF280C Zinc finger protein 280C yes no 0 0 1 7 0 1 45.838 45.925 3 3.0157E-09 11713 20230619_1887_Aki_TMTPro18x_K_F7 123.55 105.19 29223 21687 26684 25661 24573 29270 25623 23236 23939 27664 34520 35336 31800 24873 29636 31562 31203 38658 26987 19897 27279 25640 25736 29186 25741 24290 24910 27944 34807 35168 32417 26372 30274 31998 29891 36615 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30963000 25723 4249 24154 48216 38870 38870 1 9606 Homo sapiens 0.0031260055104667117 SSQTSGTNEQSSAIVSAR Unmodified 1808.85 0.85004788 3285 O60763;O60763-2 USO1 General vesicular transport factor p115 yes no 0 0 0 4.5 0.5 1 1 34.872 34.941 3 1.4856E-48 7510 20230619_1883_Aki_TMTPro18x_K_F4 278.07 260.44 26695 18849 22648 24977 33475 31038 31010 30640 41388 31580 41732 39540 36630 31384 34395 37514 45967 43231 24632 17317 23515 24796 33828 30927 31719 31352 41542 32125 42556 39522 37455 32968 35669 37909 43850 41011 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133740000 25724 3285 24155 48217;48218 38871 38871 1 9606 Homo sapiens -0.02202313802649769 SSRLEEDDGDVAMSDAQDGPR Oxidation (M) 2264.9451 0.94514684 4657 Q9UBU9;E9PIN3;Q59E96;Q9UBU9-2;E9PQA4 NXF1 Nuclear RNA export factor 1 yes no 0 1 1 1 0 1 36.521 36.521 3 1.0572E-07 8580 20230619_1880_Aki_TMTPro18x_K_F1 102.9 94.713 24587 21104 19096 24062 29073 24106 26913 27339 24966 26960 28729 23968 28340 19346 27135 32984 30713 30361 22700 19344 20027 24062 29291 24474 27200 27693 25711 27160 29255 24349 28849 20852 27844 32757 29349 28866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37618000 25725 4657 24156 48219 38872 38872 2847 1 9606 Homo sapiens -0.13672793184423426 SSSGLLEWESK Unmodified 1221.5877 0.58773217 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;M0QYT0;M0R076;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 0 0 4.75 0.968 1 2 3 2 55.264 55.313 2;3 4.925E-50 16352 20230619_1883_Aki_TMTPro18x_K_F4 318.19 254.77 256100 210730 241810 245670 230750 276210 280560 274860 287210 328620 303900 314450 355390 279670 320400 331340 318130 325810 236710 193220 246730 245710 242040 276950 280250 282300 293180 328710 313390 318590 359220 292490 326350 331830 304460 309480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2998999999.9999995 25726 1455;1520 24157 48220;48221;48222;48223;48224;48225;48226;48227 38873;38874;38875 38873 3 9606 Homo sapiens -0.014198182900145184 SSSILPR Unmodified 758.42865 0.42865276 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67;Q7Z3K3-3;B4DSK8;H0YCT3 POGZ Pogo transposable element with ZNF domain yes no 0 0 0 4.5 3.5 1 1 38.969 38.962 2 0.072702 9035 20230619_1888_Aki_TMTPro18x_K_F8 75.972 27.857 146560 113600 129110 140240 164870 178560 152050 150210 210130 157310 189580 182490 192270 158830 161440 181470 215210 206510 135340 104250 133200 139910 168200 177010 155810 155610 209780 159520 195490 183380 194720 165860 167780 183340 205330 195910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63143000 25727 4164 24158 48228;48229 38876;38877 38877 2 9606 Homo sapiens 0.03977557663188236 SSSLPASQNNLR Unmodified 1272.6422 0.64222736 413 H3BU49;A0A024R6U9;Q9Y2Y0-2;Q9Y2Y0 ARL2BP ADP-ribosylation factor-like protein 2-binding protein yes no 0 0 0 8 0 1 36.62 36.606 2 0.0058393 8109 20230619_1888_Aki_TMTPro18x_K_F8 81.338 61.551 14130 7896.3 12279 14179 18122 20570 18685 15657 21697 15710 19384 17035 18213 12868 14329 15256 17883 17214 13025 7290.4 12731 13869 18387 20189 18883 16341 21816 15930 19924 17099 18425 13552 14840 15400 17071 16332 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12598000 25728 413 24159 48230 38878 38878 1 9606 Homo sapiens 0.016811935814075696 SSSPAPADIAQTVQEDLR Unmodified 1883.9225 0.92248455 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7I2V5M7;A0A7P0P2U7;A0A7I2YQU8;A0A7I2V651;B7Z8K4;A0A7I2V326 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 3 0 1 58.859 58.888 2 8.804899999999999E-52 17957 20230619_1882_Aki_TMTPro18x_K_F3 260.97 235.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25729 3846 24160 48231 38879 38879 1 9606 Homo sapiens 0.0158802027085585 SSSPEDPGAEV Unmodified 1073.4513 0.45129827 716 A0A024RCB9;Q9Y5U2-2;Q9Y5U2 TSSC4 Protein TSSC4 yes no 0 0 0 1 0 1 41.819 41.819 2 0.0069215 10896 20230619_1880_Aki_TMTPro18x_K_F1 81.548 77.249 85403 63562 77480 85546 121010 136430 101340 116430 151750 56250 72373 73225 68197 58981 78012 58414 87310 67093 78864 58391 80075 85210 121860 133580 104810 118640 148260 60782 77826 73129 70263 61274 79547 59270 83308 63707 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46058000 25730 716 24161 48232 38880 38880 1 9606 Homo sapiens -0.08248932520496055 SSSPELVTHLK Unmodified 1196.6401 0.6401021 3810 Q07960;H0YE29;B4DPZ4;E9PNR6 ARHGAP1 Rho GTPase-activating protein 1 yes no 0 0 0 7.5 0.5 1 1 43.721 43.765 3 8.599E-05 10809 20230619_1887_Aki_TMTPro18x_K_F7 121.02 81.756 167260 122730 151950 266990 369890 427740 354000 382680 420070 239940 224050 267980 250110 190950 229710 273140 277090 285660 154440 113520 159760 259340 366770 418840 359460 389990 415970 251270 240570 268190 253490 203960 236800 273710 264720 271160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149480000 25731 3810 24162 48233;48234 38881 38881 1 9606 Homo sapiens 0.04964764843612102 SSSPLSSTR Unmodified 920.45632 0.45632407 3338 O94919 ENDOD1 Endonuclease domain-containing 1 protein yes yes 0 0 0 6.5 0.5 1 1 31.679 31.744 2 0.0016614 5989 20230619_1887_Aki_TMTPro18x_K_F7 113.71 81.352 31415 18869 35611 31693 49129 54080 52751 56837 59858 24205 28228 25467 29364 21561 34675 19531 37588 21200 29033 17399 36020 31243 50045 53009 53165 56956 59196 26302 30502 25691 30183 22281 35233 19808 35822 20178 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19549000 25732 3338 24163 48235;48236 38882 38882 1 9606 Homo sapiens -0.007085838672310274 SSSPTIALPMLLQALALSK Oxidation (M) 1956.0965 0.096549507 2475 Q49A41;B4DFK4;F5H0N1;B7Z6Z3;F5H0F9;Q9UJX4-3;Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes no 0 1 0 5.5 0.5 1 1 66.534 66.577 3 0.02744 20937 20230619_1886_Aki_TMTPro18x_K_F6 44.816 28.51 5060.8 4763.8 4880.3 5973.1 5487.6 5988.4 5519.1 5989.9 5620.6 5808.6 8813.8 6956.7 5629 6462.3 5471.9 4971 5224.4 7445.6 4682.6 4369.3 4988.1 5931.7 5651.7 6054.5 5570.8 6114.8 5840.4 5914 8739 6998 5846.3 6599.2 5551.9 5160.6 5016.5 7037.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12602000 25733 2475 24164 48237;48238 38883 38883 1520 1 9606 Homo sapiens 0.1567450944266966 SSSPTIALPMLLQALALSK Unmodified 1940.1016 0.10163489 2475 Q49A41;B4DFK4;F5H0N1;B7Z6Z3;F5H0F9;Q9UJX4-3;Q9UJX4 ANAPC5 Anaphase-promoting complex subunit 5 yes no 0 0 0 7.5 0.5 1 1 67.346 67.366 3 4.6394E-15 21051 20230619_1887_Aki_TMTPro18x_K_F7 164.57 151.45 25175 15986 19110 22382 17330 18140 20308 22094 19144 24751 22252 20867 24659 17269 20803 24933 26752 25845 23200 14703 19906 22020 18223 18755 20283 22368 19725 24732 22780 21244 24887 18362 21572 24968 25533 24542 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20363000 25734 2475 24164 48239;48240 38884 38884 1 9606 Homo sapiens 0.16918813305301228 SSSPVNVK Acetyl (Protein N-term) 858.4447 0.44469675 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 1 0 0 4 0.816 1 1 1 41.941 42.005 2 0.0010122 10397 20230619_1883_Aki_TMTPro18x_K_F4 83.801 78.946 188200 123790 232330 234990 296090 356900 234780 287590 310510 223160 269670 325790 309830 262030 287750 193250 349620 337200 174150 114290 233320 229530 301120 349730 242780 296690 310230 232280 280750 323590 313950 268920 295840 203690 333830 318790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 619690000 25735 3776 24165 48241;48242;48243 38885;38886 38885 2 9606 Homo sapiens 0.009812191094283662 SSSQIPAQPSVAK Unmodified 1298.683 0.68302954 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;B4DQN8 PRRC2C Protein PRRC2C yes no 0 0 0 8 0 1 42.585 42.587 3 5.5264E-05 10509 20230619_1888_Aki_TMTPro18x_K_F8 110.9 95.357 48630 31273 41948 50237 49270 55452 51989 52744 65379 52859 59452 52871 67745 51322 52349 56056 62729 56988 44856 28809 43331 49206 50716 55584 52667 54073 65574 53450 61576 53654 68109 53277 54091 56303 59878 54139 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121280000 25736 2894 24166 48244 38887 38887 1 9606 Homo sapiens 0.04563534901035382 SSSQPSSCCSDPSKPGGNVEGATQSLAEQMR Unmodified 3238.3925 0.3925029 2889 E7EMC7;Q13501;Q13501-2;B4E3V2 SQSTM1 Sequestosome-1 yes no 0 0 1 6 0 1 48.039 48.118 4 3.8642999999999997E-22 13092 20230619_1886_Aki_TMTPro18x_K_F6 166.2 160.77 13467 9149.8 11551 12504 8210.6 13984 10515 13144 13338 15488 15411 11974 15778 11810 13787 18440 14984 13289 12425 8410.2 11853 12368 8904.1 13993 10570 13539 13520 15417 15704 12331 15985 12541 14146 18122 14313 12683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18706000 25737 2889 24167 48245 38888 38888 1 9606 Homo sapiens -0.13715765213373743 SSSQVPPILQETDK Unmodified 1527.7781 0.77805214 567 A0A024R9D2;Q86UE4;E5RJU9;H0YBJ8 MTDH Protein LYRIC yes no 0 0 0 4.5 0.5 1 1 52.77 52.818 3 1.1395E-06 15269 20230619_1883_Aki_TMTPro18x_K_F4 122.33 85.669 126560 107410 116740 123510 120810 145300 140380 134840 148940 131380 150310 146520 153250 121070 138260 165410 148990 173020 116980 98469 119530 123710 125790 145020 140670 138400 151230 133440 154260 147290 155540 128120 141610 165840 142620 164170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 263130000 25738 567 24168 48246;48247 38889;38890 38889 2 9606 Homo sapiens 0.03527423581545008 SSSSQVVGPVQEEEYVAEK Unmodified 2050.9695 0.96949432 1216 A0A140VK05;B4DN86;Q92667-2;Q92667;I3L0W0 AKAP1 A-kinase anchor protein 1, mitochondrial yes no 0 0 0 3 0 1 51.999 52.064 3 0.0010574 15060 20230619_1882_Aki_TMTPro18x_K_F3 75.358 56.525 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25739 1216 24169 48248 38891 38891 1 9606 Homo sapiens -0.013951649685623124 SSSSSAASDTATSTQRPLR Unmodified 1908.9137 0.91371077 840 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37;Q59EY1 RBM15 Putative RNA-binding protein 15 yes no 0 0 1 6.5 0.5 1 1 30.156 30.223 3 3.8141E-49 5910 20230619_1886_Aki_TMTPro18x_K_F6 273.82 250.75 37627 33181 43749 43219 54522 56090 48577 50760 63812 51252 57388 60938 63800 50671 51578 64550 70076 59635 34856 30451 44086 42988 55596 55623 49799 52225 63866 52092 59471 61089 64329 53340 53749 64333 66797 56732 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 156790000 25740 840 24170 48249;48250 38892;38893;38894 38893 3 9606 Homo sapiens -0.0043895336559671705 SSSSSSASAAAAAAAASSSASCSR Unmodified 2088.8978 0.89780271 673 A0A024RBH2;Q07065 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 8 0 1 40.395 40.388 3 3.3219E-64 9621 20230619_1888_Aki_TMTPro18x_K_F8 289.72 282.02 7300.9 4377.6 6838.1 5224.1 5472.5 6753 6843.5 10618 10398 9111.5 7123.9 8925.2 7253 9585.7 9233.8 8414.1 8738.1 10619 6736.2 4020.5 6955.3 5236.1 5842.8 6797.3 6939 10521 10262 9281.8 7485.3 9082.8 7517.7 9793.1 9323.4 8601.7 8378.4 10056 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191280000 25741 673 24171 48251 38895 38895 1 9606 Homo sapiens -0.10309027664743553 SSSSTNTSLLTSK Unmodified 1311.6518 0.65178899 4624 Q9NXV6;B3KTW3 CDKN2AIP CDKN2A-interacting protein yes no 0 0 0 1 0 1 44.423 44.423 3 0.08995 12040 20230619_1880_Aki_TMTPro18x_K_F1 46.704 29.379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25742 4624 24172 48252 38896 38896 1 9606 Homo sapiens 0.008429170762838112 SSSTEPPPPVR Unmodified 1152.5775 0.57750184 2481 Q8N684-3;Q8N684;Q8N684-2;B4DGF8;F5H669;F5H047;F5H6M0;J3QT54;C9J323;F5H5B7;F5H1W4;C9JM38;F5GXA3;F5H6A8;F5H6P5;F5H2K8;C9J286 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 0 0 0 3.5 0.5 1 1 32.977 33.041 2 4.1082E-05 6762 20230619_1882_Aki_TMTPro18x_K_F3 143.03 129.66 46785 27682 44005 46692 57316 64064 52636 47980 68075 54230 68800 71188 68306 60576 59247 36518 115620 75377 43165 25528 45151 45773 58395 63063 53805 50312 68451 55037 70535 71061 69382 61608 63361 39341 109810 71330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 43235000 25743 2481 24173 48253;48254 38897;38898;38899 38897 3 9606 Homo sapiens 0.007316187754213388 SSSTFSGIK Unmodified 912.45526 0.45526144 1775 A0A8I5KVF8;Q6MZM4;Q6MZP3;Q8N3U4;Q8N3U4-2;B2R8Y6;Q6AI02;Q6MZM3;B4DQ46 DKFZp686P16143;DKFZp686I05169;STAG2;DKFZp686P168;DKFZp686C21148 Cohesin subunit SA-2 yes no 0 0 0 1 0 1 44.572 44.572 3 0.00030073 12111 20230619_1880_Aki_TMTPro18x_K_F1 105.52 65.169 25903 22931 29804 24658 31217 34944 29502 33295 39947 22273 24201 21738 24964 19288 29390 24878 24590 20684 23993 21005 29941 24917 32279 34518 30176 33811 39423 23118 25599 22037 25654 20275 29516 24693 23547 19705 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29540000 25744 1775 24174 48255 38900 38900 1 9606 Homo sapiens -0.004467982361347822 SSSVSPSASFR Unmodified 1110.5306 0.53055165 1886 Q04727-3;Q04727;Q04727-4;Q04727-2;A0A994J7T6;H7C4W5;A6NIY7;Q5JSY7;H7C4P7 TLE4 Transducin-like enhancer protein 4 yes no 0 0 0 8 0 1 37.642 37.628 2 0.067076 8529 20230619_1888_Aki_TMTPro18x_K_F8 61.56 42.466 19230 13831 19926 16922 19200 19290 17914 18376 22832 17339 18996 16405 18163 17830 22129 18899 26764 19125 17773 12695 20149 16876 19957 19312 18298 18806 22813 17567 19626 16760 18778 18393 22666 19000 25509 18191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11358000 25745 1886 24175 48256 38901 38901 1 9606 Homo sapiens -0.020292407757096953 SSTAAQEVK Unmodified 919.46108 0.4610751 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 4 0 1 35.269 35.317 2 0.00014528 7664 20230619_1883_Aki_TMTPro18x_K_F4 136.57 82.017 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25746 617 24176 48257 38902 38902 1 9606 Homo sapiens -0.0018769972448353656 SSTFSDVEAHFR Unmodified 1381.6262 0.62624295 4249 Q8ND82 ZNF280C Zinc finger protein 280C yes yes 0 0 0 5.5 0.5 1 1 47.928 48.005 3 0.06386 12906 20230619_1885_Aki_TMTPro18x_K_F5 42.232 29.047 65408 55499 70912 71039 84010 82873 88786 86267 107760 73856 87385 85007 87533 80660 84855 90777 86238 85134 60537 50931 71774 70632 86277 82996 89800 87565 107770 75715 90613 85701 89255 83834 86443 90741 82491 80924 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24052000 25747 4249 24177 48258;48259 38903 38903 1 9606 Homo sapiens -0.04930512655505481 SSTGPEPPAPTPLLAER Unmodified 1718.8839 0.88391419 1230 Q9UQ35;A0A140VK53;Q9UQ35-2;I3L4D8;I3L182;Q9UQ39;I3L1I8;Q9UQ35-3 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 4.5 0.5 1 1 49.708 49.764 3 3.263E-09 13651 20230619_1885_Aki_TMTPro18x_K_F5 128.45 107.21 57559 45978 55338 49131 48871 63124 61535 57408 70730 53042 54222 57040 56358 48612 57802 61684 69092 62125 53198 42131 56279 49578 51698 62628 61584 58930 70818 54000 56537 57451 57550 51110 59391 61791 65949 59027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204340000 25748 1230 24178 48260;48261 38904 38904 1 9606 Homo sapiens 0.053227594270310874 SSTITVDQMK Unmodified 1108.5434 0.54342452 2235 B4DKX4;B2R6E2;Q53EL6-2;Q53EL6 PDCD4 Programmed cell death protein 4 yes no 0 0 0 6.5 0.5 1 1 46.133 46.218 2 1.0079E-06 12221 20230619_1886_Aki_TMTPro18x_K_F6 204.07 126.79 99248 73274 88261 94749 132190 157430 129800 133900 166360 118380 138320 164360 150830 137010 141990 163690 196000 189350 91632 67287 91308 94709 133940 153830 132080 137940 166150 121980 143970 163840 153270 143610 147630 165430 186960 179600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78706000 25749 2235 24179 48262;48263 38905;38906 38905 2 9606 Homo sapiens -0.006505457078219479 SSTPEEVK Unmodified 875.42363 0.42362696 3495 V9HWI5;P23528;G3V1A4;E9PK25;E9PP50;B4E112;E9PQB7;E9PLJ3;E9PS23 HEL-S-15;CFL1 Cofilin-1 yes no 0 0 0 2.5 0.5 1 1 36.316 36.373 2 0.0023502 8151 20230619_1882_Aki_TMTPro18x_K_F3 141.52 85.801 53499 24222 74729 80246 113640 116270 83387 114360 70279 53121 107720 150050 81826 97810 100060 33535 138920 127700 49494 22667 74750 76784 113970 114660 85556 115260 73711 59850 107960 145930 85413 99149 103180 40239 132470 120340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 318080000 25750 3495 24180 48264;48265 38907 38907 1 9606 Homo sapiens -0.01906790990085483 SSTPEEVKK Unmodified 1003.5186 0.51858998 3495 V9HWI5;P23528;G3V1A4;E9PK25;E9PP50;B4E112;E9PQB7;E9PLJ3;E9PS23 HEL-S-15;CFL1 Cofilin-1 yes no 0 0 1 5 0.816 1 1 1 36.272 36.338 3 0.0037102 8074 20230619_1885_Aki_TMTPro18x_K_F5 82.749 38.302 183090 100900 247920 235470 412220 389700 298200 400360 268160 210660 376570 432270 246740 312800 361740 135850 400020 357500 169450 93567 248770 228570 411300 382390 306710 402810 278820 229640 376180 424320 262090 316920 366630 152590 382070 337360 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 510870000 25751 3495 24181 48266;48267;48268 38908;38909;38910 38909 3 9606 Homo sapiens 0.016971424811004 SSTPLPTISSSAENTR Unmodified 1646.8111 0.81114318 3578;668;675 A0A024RBE7;P42167;G5E972;P42167-3;H0YJH7;A0A024RBH7;P42167-2;Q59G12;P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 0 0 0 6 0.816 1 1 1 44.465 44.549 3 3.7626E-11 11428 20230619_1886_Aki_TMTPro18x_K_F6 155.56 137.93 270060 243860 298380 297750 315560 317190 328310 338310 353640 328990 333920 305290 354940 272070 355910 307860 351010 299380 250090 223640 300970 296620 326400 319850 331160 343850 358090 332250 344340 309940 361410 283790 361330 308520 335530 284630 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 983900000 25752 668;675;3578 24182 48269;48270;48271 38911;38912;38913 38912 3 9606 Homo sapiens 0.01361005633611967 SSTPLSEAK Unmodified 918.46583 0.46582612 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 4.8 0.748 2 2 1 40.359 40.429 2;3 4.2646E-05 9742 20230619_1883_Aki_TMTPro18x_K_F4 164.96 105.97 349970 209560 364870 416920 417130 471940 365260 438620 464120 350310 498790 542960 434080 423760 482970 313550 618120 539000 323180 193710 370470 404280 427980 471850 374680 447990 468020 364750 507680 538090 447900 435180 496700 330080 589560 509850 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 568000000 25753 630 24183 48272;48273;48274;48275;48276 38914;38915;38916 38914 3 9606 Homo sapiens 0.0033318441827532297 SSTPTTIFPIR Unmodified 1218.6608 0.66083754 4193 Q86W42-3;Q86W42-2;Q86W42 THOC6 THO complex subunit 6 homolog yes no 0 0 0 3 0 1 52.524 52.583 2 1.1011E-08 15291 20230619_1882_Aki_TMTPro18x_K_F3 182.39 156.5 84039 73353 79193 79021 79167 93602 97438 89182 102260 101420 104650 101130 112440 91452 104340 112060 107370 110920 77704 67198 80868 79569 82769 93455 97320 91749 104010 101840 107580 102380 114090 95768 106450 112190 102730 105350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126070000 25754 4193 24184 48277 38917 38917 1 9606 Homo sapiens 0.06025355223277984 SSTSSSVGTDVTEGPAHPAPHTR Unmodified 2277.0622 0.062165925 939 A0A0A0MRJ3;A0A8I5KSE4;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;Q8NEY1-5 NAV1 Neuron navigator 1 yes no 0 0 0 4 0 1 31.938 31.998 4 1.6774E-13 6340 20230619_1883_Aki_TMTPro18x_K_F4 102.45 86.944 4828.3 1994.1 2662.4 3619.2 4596.2 3555.7 3908.4 4003.8 4808.3 3394.5 3716.5 4212.7 2306.8 2744.2 3802.9 3252.9 3477.9 3483.3 4434.2 1844.9 2917.3 3517.4 4597.8 3612 4006.2 4043.6 4799.4 3488.9 3808.5 4187.3 2476.1 2901.8 3820 3275.8 3330.8 3306 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6189800 25755 939 24185 48278 38918 38918 1 9606 Homo sapiens -0.025282671825152647 SSTTSMTSVPK Unmodified 1124.5383 0.53833914 3840 Q59EG8;Q13200;B4DM22;Q9NSM5;H7C2Q3;C9JPC0 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 4.5 3.5 1 1 41.328 41.325 2 8.0565E-06 10012 20230619_1888_Aki_TMTPro18x_K_F8 151.83 125.37 57160 35653 47577 62036 58881 69075 64253 68376 91634 81825 74714 74269 84737 66951 62730 68832 92297 75908 52703 32884 49396 60513 60515 69245 65293 70236 91133 81773 77853 75445 85120 69452 65828 69527 87910 72083 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33009000 25756 3840 24186 48279;48280 38919;38920 38920 2 9606 Homo sapiens -0.018948495704535162 SSTTSMTSVPK Oxidation (M) 1140.5333 0.53325376 3840 Q59EG8;Q13200;B4DM22;Q9NSM5;H7C2Q3;C9JPC0 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 1 0 7 0 1 35.906 35.978 3 0.00022476 7658 20230619_1887_Aki_TMTPro18x_K_F7 103.31 84.069 30587 17673 29045 27567 34086 40212 32656 32656 41870 36918 38960 39464 41324 34477 34113 32892 49683 39313 28219 16283 29703 27178 35008 39507 33294 33986 42012 37179 40207 39758 41771 35658 35660 33448 47314 37310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53571000 25757 3840 24186 48281 38921 38921 2516 1 9606 Homo sapiens -0.031391534330850845 SSTTTTPVQSGANVVK Unmodified 1575.8104 0.8104149 3787 Q9BRW5;Q02086-2;Q02086 SP2 Transcription factor Sp2 yes no 0 0 0 8 0 1 42.15 42.153 3 3.2083E-11 10351 20230619_1888_Aki_TMTPro18x_K_F8 157.68 138.36 15556 12166 13559 14461 14868 17548 16033 15134 20771 15072 21162 18555 17780 14172 18195 18657 16592 18057 14365 11160 13967 14456 15393 17453 16242 15630 20874 15354 21527 18549 18263 15000 18411 18643 15901 17152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20249000 25758 3787 24187 48282 38922 38922 1 9606 Homo sapiens 0.04554210984565543 SSTVAPAQPDGAESEWTDVETR Unmodified 2332.0455 0.045512807 1675 H7BYN4;A0A7I2V5Y5;Q02241-2;Q02241;A0A2U3TZL8;Q02241-3 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 0 0 0 2 0 1 50.251 50.303 3 1.1067E-23 14619 20230619_1881_Aki_TMTPro18x_K_F2 186.9 174.26 9568.4 9608.5 16585 14193 9481.1 15573 13901 15573 15026 15829 13529 14132 18484 16026 11818 13328 15854 17618 8913.9 8826.9 16149 13977 10549 15623 13811 15910 15197 15932 14166 14477 18395 16336 12365 13674 15142 16681 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20783000 25759 1675 24188 48283 38923 38923 1 9606 Homo sapiens -0.06722812859152327 SSTVPSSNTASGGMTR Oxidation (M) 1554.6944 0.69439886 1646 P27448-7;P27448;A0A7I2V2N8;A0A7I2V639;A0A7I2V3I9;A0A7I2V5G3;A0A7I2V4K8;A0A7I2V549;A0A7I2V3B9;A0A7I2V4G7;A0A7I2V2I9;H0YJI9;H0YNV4;A0A7I2V3K2;P27448-2;J3KNR0;P27448-4;A0A7I2V2U9;P27448-3;P27448-6;A0A7I2V602;A0A7I2V409;A0A7I2YQF4;H0YKP9;A0A7I2V2E3;A0A7I2V4T2;A0A7I2V3P5;A0A7I2V3C6;A0A7I2YQF7;A2SY06;Q86U11;B4DKN1;P27448-8;H0YIY6 MARK3 MAP/microtubule affinity-regulating kinase 3 yes no 0 1 0 6 0 1 30.17 30.201 3 0.0064462 5856 20230619_1886_Aki_TMTPro18x_K_F6 65.231 60.077 2799.8 1829.8 2529.3 3816.5 4062.5 4210.8 2478.1 3389.8 3414 3128.7 5066.7 5686 5066.3 3490.6 3327.4 2136.6 3968.1 4537.6 2583.6 1692 2621.2 3689.4 4056.7 4206.3 2623.5 3512.9 3489.1 3252.6 5121.4 5575.2 5080.5 3606.8 3442.7 2307.8 3794.4 4282.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3225300 25760 1646 24189 48284 38924 38924 1070 1 9606 Homo sapiens -0.060760558578294876 SSTVPSSNTASGGMTR Unmodified 1538.6995 0.69948424 1646 P27448-7;P27448;A0A7I2V2N8;A0A7I2V639;A0A7I2V3I9;A0A7I2V5G3;A0A7I2V4K8;A0A7I2V549;A0A7I2V3B9;A0A7I2V4G7;A0A7I2V2I9;H0YJI9;H0YNV4;A0A7I2V3K2;P27448-2;J3KNR0;P27448-4;A0A7I2V2U9;P27448-3;P27448-6;A0A7I2V602;A0A7I2V409;A0A7I2YQF4;H0YKP9;A0A7I2V2E3;A0A7I2V4T2;A0A7I2V3P5;A0A7I2V3C6;A0A7I2YQF7;A2SY06;Q86U11;B4DKN1;P27448-8;H0YIY6 MARK3 MAP/microtubule affinity-regulating kinase 3 yes no 0 0 0 7 0 1 34.067 34.148 2 0.00084126 6983 20230619_1887_Aki_TMTPro18x_K_F7 88.441 63.055 6060.6 2692.9 3440.1 5199.1 6708.8 4420.4 4748.4 4608.6 6957.7 4285.5 5451.1 5643.4 5909.8 4618.3 5432.6 3419.9 6719.7 6735.9 5568 2492.5 3767.5 5027.9 6645.1 4537.7 4965.8 4690.3 6896.1 4395 5684.5 5628.8 5993.2 4741.2 5591.7 3647.9 6417 6362.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3170500 25761 1646 24189 48285 38925 38925 1 9606 Homo sapiens -0.04831751995197919 SSTVTEAPIAVVTSR Unmodified 1516.8097 0.80968662 391 A0A024R6D1;A0A7I2V5R1;Q8TD19;G3V5V0;A0A7I2V454;A0A7I2V4E9;B3KY50 NEK9 Serine/threonine-protein kinase Nek9 yes no 0 0 0 7 0 1 49.641 49.725 3 0.028403 13479 20230619_1887_Aki_TMTPro18x_K_F7 30.418 11.638 390780 336630 371230 377200 381770 361630 438190 425350 435650 285840 295620 285470 319750 248140 454270 376760 361940 304990 361320 308500 378880 377640 396670 368560 438400 426500 437940 296480 311290 288970 331820 263990 454020 372780 346800 290650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63121000 25762 391 24190 48286 38926 38926 1 9606 Homo sapiens 0.07195416335503069 SSVELPPYSGTVLCGTQAVDKLPDGQEYQR Unmodified 3293.5874 0.58742118 1642 A0A7G6J4N4;Q14694;Q14694-3;Q14694-2;H3BQC6 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 0 0 1 7 0 1 59.825 59.871 4 4.257199999999999E-21 17751 20230619_1887_Aki_TMTPro18x_K_F7 148.89 142.8 17726 17426 17354 19665 14818 17872 18419 16247 17353 23167 19003 18350 21030 14923 18627 20619 15104 17031 16409 15964 17638 19654 15695 18176 18333 16906 17839 22884 19506 18722 21256 15821 18802 20423 14499 16207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25504000 25763 1642 24191 48287 38927 38927 1 9606 Homo sapiens 0.03237096925613514 SSVGPSKPVSQPR Unmodified 1324.7099 0.709913 192 A0A024R297;Q9Y657 SPIN;SPIN1 Spindlin-1 yes no 0 0 1 2.5 0.5 1 1 34.602 34.661 3 0.00030598 7437 20230619_1882_Aki_TMTPro18x_K_F3 95.631 76.886 86718 58595 82551 77336 114410 120060 107800 98958 111160 49184 64475 50064 39654 31958 89929 29230 40514 20023 80066 53839 84655 77111 116090 117660 109110 101220 110960 52512 67270 50221 43602 33406 87491 29118 39099 19190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68369000 25764 192 24192 48288;48289 38928 38928 1 9606 Homo sapiens 0.060546435122205366 SSVLENFVGR Unmodified 1106.572 0.57202253 3619;1021;2880 A0A0U1RQP1;A0A0D9SFE4;A0A994J7J4;Q05193-3;Q05193;A0A0D9SFB1;B7ZAC0;B4DK06;Q05193-5;Q05193-2;A0A1B0GUX5;P50570-3;P50570-2;P50570-5;P50570-4;P50570;E5RHK8;H0YBC6;Q9UQ16-2;Q9UQ16-3;Q9UQ16;Q9UQ16-4;B3KPF2;Q9UQ16-5 DNM1;DNM2;DNM3 Dynamin-1;Dynamin-2;Dynamin-3 no no 0 0 0 1 0 1 54.679 54.679 2 0.0050648 16285 20230619_1880_Aki_TMTPro18x_K_F1 90.15 68.38 175420 136580 180710 206830 140140 171510 164230 163960 194300 222100 224460 233080 232280 193950 216610 245710 240570 293300 162200 125620 182670 202530 149580 175860 165260 169690 197570 221620 229280 234750 236050 204200 222040 248630 230310 277880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 559140000 25765 1021;3619;2880 24193 48290 38929 38929 1 9606 Homo sapiens 0.0229993998361806 SSVLIAQQTDTSDPEK Unmodified 1717.837 0.83702358 162 A0A024R1U0;P46060;B4DY16;B4E0U0;Q9BSK3 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 0 2.5 0.5 1 1 47.819 47.894 3 9.2319E-06 13161 20230619_1882_Aki_TMTPro18x_K_F3 104.44 85.605 93106 70077 77034 72549 82649 90940 97442 92509 97069 97205 97380 85475 106760 93480 92909 114690 99611 101270 85927 64212 79657 73369 85815 90629 97369 94500 98949 97644 100230 87670 108020 97268 95212 114110 95254 96324 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 300920000 25766 162 24194 48291;48292 38930 38930 1 9606 Homo sapiens 0.006818550852358385 SSVNCPFSSQDMK Oxidation (M) 1501.6177 0.61772845 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 1 0 5.75 0.829 2 1 1 43.362 43.446 3 8.8594E-06 10963 20230619_1886_Aki_TMTPro18x_K_F6 120.21 106.53 218460 169160 193850 220750 256570 235430 239380 246760 252670 267390 272050 237300 289510 238660 250490 326510 276000 261920 201750 155320 200010 218870 260740 237320 242810 251800 257610 268180 278730 242610 293030 250750 257230 322870 263730 249510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 804700000 25767 3811 24195 48293;48294;48295;48296 38931;38932;38933 38932 2495 3 9606 Homo sapiens -0.11301570678665485 SSVNCPFSSQDMK Unmodified 1485.6228 0.62281383 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 6.5 0.5 2 2 47.463 47.548 2;3 2.7515E-16 12446 20230619_1887_Aki_TMTPro18x_K_F7 175.48 153.61 676180 547930 546700 620900 564320 702970 709440 675550 724020 818700 755570 707130 851650 680330 666000 970850 910230 859830 624220 502320 567020 622220 589490 703930 707260 695810 738670 816220 777490 722540 857290 718210 695650 963750 868190 818030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1313100000 25768 3811 24195 48297;48298;48299;48300 38934;38935;38936 38936 3 9606 Homo sapiens -0.10057266816033916 SSVPGVR Unmodified 700.38679 0.38678794 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;A0A1B0GVG8 VIM;HEL113 Vimentin yes no 0 0 0 5.5 1.71 1 1 1 1 1 1 33 33.056 2 0.0068664 6956 20230619_1886_Aki_TMTPro18x_K_F6 129.67 15.823 417750 212230 488340 405450 1202700 1363300 689940 857780 914200 619090 909180 1075300 841900 841570 891730 403950 1023700 940290 385910 196240 500480 405370 1179500 1293400 732380 903470 917750 653200 931340 1061700 864640 852580 910320 444790 977580 887710 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3567699999.9999995 25769 3414 24196 48301;48302;48303;48304;48305;48306 38937;38938;38939;38940 38938 4 9606 Homo sapiens 0.024610019746660328 SSVQEECVSTISSSK Unmodified 1626.7407 0.74068036 4150 Q7L0Y3;C9JVB6 TRMT10C Mitochondrial ribonuclease P protein 1 yes no 0 0 0 4 0 1 44.353 44.397 3 0.0026602 11452 20230619_1883_Aki_TMTPro18x_K_F4 76.151 68.107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25770 4150 24197 48307 38941 38941 1 9606 Homo sapiens -0.04762035746352922 SSVQEECVSTISSSKDEDPLAATR Unmodified 2595.197 0.19700443 4150 Q7L0Y3;C9JVB6 TRMT10C Mitochondrial ribonuclease P protein 1 yes no 0 0 1 4 0 1 49.415 49.45 4 0.00014621 13734 20230619_1883_Aki_TMTPro18x_K_F4 72.676 68.15 50495 36259 40590 41525 45448 51432 49684 41023 56986 47611 52770 43993 48903 45526 56944 55448 56242 49530 46580 33260 42139 41636 46979 51025 50050 42826 57436 47699 54133 44928 50446 47413 57714 55240 53773 47131 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110900000 25771 4150 24198 48308 38942 38942 1 9606 Homo sapiens -0.03678619613583578 SSVVTAVK Unmodified 789.45962 0.45961853 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 4.5 3.5 1 1 42.73 42.732 2 0.00070706 11274 20230619_1880_Aki_TMTPro18x_K_F1 170.66 69.381 239350 125960 280060 284150 359130 367770 294130 323260 330900 270350 381520 389050 344770 316400 349010 168160 432090 369370 221140 116770 282260 274740 364720 364270 301670 331850 336760 279750 387540 386760 353410 321080 358330 183280 412180 348930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 205760000 25772 2126 24199 48309;48310 38943;38944 38943 2 9606 Homo sapiens 0.056467109774303026 SSVYSPESNVR Unmodified 1223.5782 0.57823012 872 A0A8V8TMN4;B4DGV1;A0A087WZV0;O43314-2;O43314;H0Y9M0;D6RBU4 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 yes no 0 0 0 5 0 1 37.229 37.322 2 2.1497E-11 8417 20230619_1885_Aki_TMTPro18x_K_F5 172.98 122.18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25773 872 24200 48311 38945 38945 1 9606 Homo sapiens -0.024615865755322375 SSYDVFQLEFNDGAYNIK Unmodified 2108.9691 0.96910039 1426 A0A384MEG1;Q16658;B3KTA3;B3KTM9 FSCN1 Fascin yes no 0 0 0 6.5 0.5 1 1 63.441 63.482 3 7.5235E-32 19389 20230619_1887_Aki_TMTPro18x_K_F7 242.44 232.78 295210 221680 277150 265970 225470 255630 282160 247260 266130 334630 326150 362410 334600 350980 364230 394880 347860 404280 272690 203400 282200 264920 239800 259150 280810 255690 274730 334270 332580 366160 343040 364440 369150 396580 333380 383680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1176000000 25774 1426 24201 48312;48313 38946;38947 38947 2 9606 Homo sapiens -0.04102539897758106 SSYFVNPLFSK Acetyl (Protein N-term) 1329.6605 0.66050319 3531 P31273 HOXC8 Homeobox protein Hox-C8 yes yes 1 0 0 2 0 1 65.404 65.411 2 0.00077859 20982 20230619_1881_Aki_TMTPro18x_K_F2 66.435 48.274 10817 7473.3 7783.8 10725 8578 10473 9843.7 10552 9940.7 8226.3 9671.3 9117.2 9997.1 6751 8977.5 11146 10707 10024 9969.4 6872.5 8190.4 10553 8895.5 10605 9856.4 10715 10104 8464.6 9946.4 9146.9 10135 7279.8 9254.2 11060 10223 9535.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24435000 25775 3531 24202 48314 38948 38948 1 9606 Homo sapiens 0.008859355034246619 SSYIAASTAKPPK Unmodified 1319.7085 0.70851601 2240 B4DXX1;B2R713;Q7Z2T5;Q7Z2T5-2 TRMT1L TRMT1-like protein yes no 0 0 1 3.5 0.5 1 1 42.993 43.048 3 5.9455E-06 10937 20230619_1882_Aki_TMTPro18x_K_F3 128.54 100.68 54081 43675 55460 63807 74409 81103 75365 72613 79913 76932 90410 91195 92684 72702 77600 89260 93518 95236 50014 40146 56569 62970 75793 80480 76061 74886 81564 77952 92359 91321 93768 76507 80117 89732 89335 90386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71592000 25776 2240 24203 48315;48316 38949 38949 1 9606 Homo sapiens 0.06145009423448755 SSYLESPR Unmodified 937.45051 0.45051041 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1;F8VU51 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 0 5 0 1 38.249 38.341 2 0.009481 8837 20230619_1885_Aki_TMTPro18x_K_F5 101.6 76.602 47229 30413 42829 49700 61078 62422 55511 51805 66660 49066 51390 51310 49068 43315 50967 54582 57976 50162 43580 28022 44185 48727 61834 61896 56607 53594 66629 49847 53352 51731 50272 45523 52197 54416 55350 47719 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30933000 25777 3610 24204 48317 38950 38950 1 9606 Homo sapiens -0.02071682378903006 SSYLEYQK Unmodified 1016.4815 0.48147619 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72;Q6IPS5;Q7Z2X1;A0JLM9;Q32Q15;Q05D74;Q5T821 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 6.5 0.5 1 1 46.415 46.501 2 0.00039615 11943 20230619_1887_Aki_TMTPro18x_K_F7 179.21 135.96 188890 139860 158530 171750 185580 193110 187420 190450 223670 210840 228990 211320 229570 191780 200120 244660 242080 211490 174320 128360 164030 171120 190700 193630 190000 195260 226010 212030 234570 213990 232890 201230 206560 243040 231010 201340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108450000 25778 128 24205 48318;48319 38951;38952 38952 2 9606 Homo sapiens -0.026105290646682988 SSYYVVSGNDPAAEEPSR Unmodified 1926.8595 0.85954994 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 2.5 0.957 1 2 2 1 45.612 45.672 2;3 2.469E-85 12395 20230619_1881_Aki_TMTPro18x_K_F2 258.7 253.7 116960 84967 99721 119210 106970 123150 116660 115970 142630 130330 143220 147740 131690 121970 135700 127750 147530 157550 107940 78100 102970 117570 110920 124020 117870 119380 143800 131500 146450 148260 135030 126970 138530 129980 141120 149290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1121500000 25779 630 24206 48320;48321;48322;48323;48324;48325 38953;38954 38953 2 9606 Homo sapiens -0.06680545517087921 STACQMLVCYAK Oxidation (M) 1446.6305 0.63054174 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6 IPO5;RANBP5 Importin-5 yes no 0 1 0 1.5 0.5 1 1 48.452 48.484 3 0.001227 13767 20230619_1880_Aki_TMTPro18x_K_F1 81.92 68.516 146500 108270 123420 119880 136980 139480 134230 135580 154570 156270 134160 115770 140950 114700 118900 150690 150000 130680 135210 99271 127450 120440 141120 139530 136150 139280 155620 155600 138760 119390 142600 120300 123180 149640 143090 124400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166040000 25780 782 24207 48326;48327 38955;38956 38955 475 2 9606 Homo sapiens -0.07490830820074734 STACQMLVCYAK Unmodified 1430.6356 0.63562712 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6 IPO5;RANBP5 Importin-5 yes no 0 0 0 3 0 1 54.314 54.361 3 0.00023247 16121 20230619_1882_Aki_TMTPro18x_K_F3 96.745 81.869 216040 184200 198330 206410 165080 201890 222840 219460 243050 246490 218150 216620 261720 206140 196630 296420 258060 256960 199680 168820 202530 206680 175840 204910 221980 223710 245590 246730 226840 221040 262610 217820 205040 293900 246310 244480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150020000 25781 782 24207 48328 38957;38958 38958 2 9606 Homo sapiens -0.06246526957443166 STADALDDENTFK Acetyl (Protein N-term) 1467.6365 0.63653286 229 A0A024R395;P49959;F8W7U8;P49959-2;Q05D78;Q9BS79;F5GXT0;F5H742;A0A0S2Z438;F5H256 MRE11A Double-strand break repair protein MRE11A yes no 1 0 0 1 0 1 55.469 55.469 2 8.824600000000001E-29 16617 20230619_1880_Aki_TMTPro18x_K_F1 171.36 147.93 142570 145070 135910 162430 130730 146680 142570 153080 182090 160290 181280 194770 187860 173600 192370 225690 212720 191800 131980 132880 138690 162430 136620 149710 144340 156180 183160 162690 186440 195530 191870 182370 196840 223990 203180 182610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 469430000 25782 229 24208 48329 38959 38959 1 9606 Homo sapiens -0.07857994511573452 STAGDTHLGGEDFDNR Unmodified 1690.7183 0.71830543 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;P11142-2;Q53HF2;E9PN89;P54652;A0A024R6B5;A0A384MDT7 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 0 0 0 3.71 1.83 1 1 1 2 1 1 37.472 37.522 3 6.0699999999999994E-92 8669 20230619_1881_Aki_TMTPro18x_K_F2 305.05 286.22 1813700 1434000 1699000 1904800 1738200 2008100 1959000 2143900 1890900 2221500 2276100 2294200 2527100 2124900 1806000 2377200 2415800 2390500 1675800 1316800 1737400 1886200 1808700 2025300 1961500 2182300 1947400 2242000 2327500 2320100 2537000 2211000 1885900 2384000 2305300 2270500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 14471000000 25783 3430 24209 48330;48331;48332;48333;48334;48335;48336 38960;38961;38962;38963;38964 38961 5 9606 Homo sapiens -0.09942499099747693 STAGNFLVNPLEPK Unmodified 1485.7827 0.78274359 2119 A8K8B2;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3;A0A024RCU9 SRPK1 SRSF protein kinase 1 yes no 0 0 0 1 0 1 60.386 60.386 3 2.7355E-07 18649 20230619_1880_Aki_TMTPro18x_K_F1 140.31 119.93 83083 84616 101690 89715 117660 144270 110310 106910 142030 109870 118810 139820 119330 97943 106400 126620 134000 158840 77084 77466 101940 90929 120870 140880 112620 111860 141900 111870 123140 139100 121180 103980 110060 128510 128120 150440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118140000 25784 2119 24210 48337 38965 38965 1 9606 Homo sapiens 0.059283525149794514 STAPASLSR Unmodified 888.46649 0.46649483 511 A0A8Q3SHZ4;A0A494C1F2;A0A024R8B6;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A8Q3WLX1;Q7Z3C4 NUP214;DKFZp686J0330 Nuclear pore complex protein Nup214 yes no 0 0 0 6.5 0.5 1 1 32.681 32.743 2 0.0032783 6403 20230619_1887_Aki_TMTPro18x_K_F7 98.582 43.806 28547 14995 36449 35633 57269 60175 40526 50349 47395 22155 31302 27165 29882 29699 41390 15562 35967 29976 26398 13914 36671 34565 57354 58713 42061 51315 47182 24106 32812 27455 31119 29807 41437 16763 34424 28341 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23739000 25785 511 24211 48338;48339 38966;38967 38967 2 9606 Homo sapiens 0.01780023858009372 STASALTK Unmodified 777.42323 0.42323303 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;Q5H962;B4DGF6 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 8 0 1 39.259 39.245 2 0.018728 9182 20230619_1888_Aki_TMTPro18x_K_F8 97.431 44.264 31624 23213 39560 43672 54628 56294 43157 50577 61766 32866 43566 46940 38170 35425 44706 31188 48928 43808 29284 21419 39770 42543 55224 55803 44760 51574 61046 34643 45351 46612 39472 36692 45499 32164 46738 41494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15949000 25786 594 24212 48340 38968 38968 1 9606 Homo sapiens 0.02561834080722747 STAYEDYYYHPPPR Unmodified 1757.7686 0.76855009 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH35;B4DMD1;A0A286YEZ8;Q7Z334 HNRNPR;HNRPR;DKFZp686A13234;DKFZp686O0665 Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 5.75 1.48 1 1 1 1 43.335 43.392 3 1.2493E-16 10847 20230619_1888_Aki_TMTPro18x_K_F8 176.91 160.25 800210 640650 752910 849460 761840 913920 905190 893800 902420 1023200 913620 896040 1202100 955920 714860 1301100 1103000 1070100 739470 588270 769650 841360 794930 918510 904370 917910 921070 1023200 948850 918170 1194400 1002400 760140 1287200 1051400 1018900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 869620000 25787 3254 24213 48341;48342;48343;48344 38969;38970;38971 38971 3 9606 Homo sapiens -0.0800234470398209 STCIYGGAPK Unmodified 1052.4961 0.4960804 1328;3137 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7;P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3QRQ7;J3KRZ1 DDX17;DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX17;Probable ATP-dependent RNA helicase DDX5 no no 0 0 0 5.67 2.98 1 1 1 3 42.757 42.777 2;3 0.0002195 10685 20230619_1888_Aki_TMTPro18x_K_F8 135.79 105.98 489600 386630 428910 483660 488040 521430 541220 550290 690960 686250 702290 629360 802540 649040 524380 787710 801300 701550 452160 354820 441990 480980 503900 525130 547200 563670 696060 684670 723480 642610 802690 676290 554810 783770 763310 667610 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1181000000 25788 1328;3137 24214 48345;48346;48347;48348;48349;48350 38972;38973;38974;38975;38976 38976 5 9606 Homo sapiens -0.02806780188166158 STCTINYSK Unmodified 1072.4859 0.48590964 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GTJ4;A0A1B0GV49 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 4.5 3.5 1 1 41.203 41.2 2 3.5681E-05 9965 20230619_1888_Aki_TMTPro18x_K_F8 166.09 117.29 144290 83455 213270 187920 271580 330960 205010 254480 223110 152430 255280 294540 220680 234090 259870 108910 292070 240210 133710 77321 211650 182850 275770 321690 211380 262350 227230 163950 259250 290230 228500 236710 264450 119370 278780 226950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 156790000 25789 1415 24215 48351;48352 38977;38978 38978 2 9606 Homo sapiens -0.04743387913413244 STCTYVGAAK Unmodified 1056.491 0.49099502 3057 Q9P2T1;Q6PKC0;Q9P2T1-3;H0YMB3;Q9P2T1-2;Q7Z527;H0YNJ6;H0YLV5;Q86SZ5;H0YMW6;H0YK71;H0YN22;H0YK13;P36959 GMPR2;GMPR GMP reductase 2;GMP reductase;GMP reductase 1 yes no 0 0 0 8 0 1 40.351 40.344 2 4.3489E-07 9635 20230619_1888_Aki_TMTPro18x_K_F8 215.38 179.2 32150 16801 41458 38269 52379 64846 48088 53173 46750 35071 58007 59667 51829 50097 54312 24770 63479 64313 29732 15578 41498 37188 53444 63213 48722 54618 48079 37180 58740 59096 53249 50673 55520 27614 60653 60662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18655000 25790 3057 24216 48353 38979 38979 1 9606 Homo sapiens -0.034990840507816756 STDEEEEAQTPQAPR Unmodified 1686.7333 0.73328679 4649 Q9P2K3;Q9P2K3-3 RCOR3 REST corepressor 3 yes no 0 0 0 1 0 1 35.197 35.197 2 0.004326 8058 20230619_1880_Aki_TMTPro18x_K_F1 78.653 69.698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25791 4649 24217 48354 38980 38980 1 9606 Homo sapiens -0.08261052022430704 STDFAPIK Unmodified 877.45453 0.45453316 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 6.67 0.471 1 2 48.615 48.699 2;3 0.007866 13327 20230619_1886_Aki_TMTPro18x_K_F6 106.36 61.664 236850 168800 189060 223740 197740 260980 218400 217780 353250 206430 222930 253260 250660 227460 198320 295890 327820 291920 218460 155070 196420 221820 206000 259930 223040 225220 346550 211050 236180 254190 252800 238990 210250 295710 312150 277440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 351930000 25792 630 24218 48355;48356;48357 38981;38982 38981 2 9606 Homo sapiens 0.010904071148161165 STDFAPIKEDFGQEK Unmodified 1710.8101 0.81008055 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 1 5 0 1 54.293 54.362 3 1.0852E-05 15566 20230619_1885_Aki_TMTPro18x_K_F5 113.1 94.734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25793 630 24219 48358 38983 38983 1 9606 Homo sapiens -0.01689208735297143 STDPTQIK Unmodified 888.45526 0.45526144 1341 A0A590UJ60;A0A5F9UJV3;A0A2R8Y2A8;A0A590UKC4;Q68CN5;Q13367;Q13367-4;A0A590UJW5;A0A590UJU7;A0A590UJU0;A0A590UK04;Q13367-3;A0A590UKD3;B3KUS4;A0A590UJE5;A0A590UK30 DKFZp686D17136;AP3B2 AP-3 complex subunit beta-2 yes no 0 0 0 4.5 0.5 1 1 37.058 37.126 3 0.041888 8317 20230619_1885_Aki_TMTPro18x_K_F5 51.995 1.1173 27011 178310 54909 32398 30908 116620 45236 42582 43535 31272 31220 29957 27774 24186 84275 25836 73002 33869 26292 161650 53069 46221 34960 110040 44761 48258 43905 32265 32578 30276 31161 25241 83732 26573 69686 32227 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95018000 25794 1341 24220 48359;48360 38984 38984 1 9606 Homo sapiens 0.006572017638632133 STDTGVSLPSYEEDQGSK Acetyl (Protein N-term) 1940.8487 0.84871048 2207 C9JAW5;B2R4G1;C9JNU6;Q9Y241 HIGD1A HIG1 domain family member 1A, mitochondrial yes no 1 0 0 1.5 0.5 1 1 54.502 54.514 3 0.00047561 16197 20230619_1880_Aki_TMTPro18x_K_F1 47.204 33.525 105360 82818 98428 113400 94799 106100 115140 108620 125060 143750 134580 142250 154530 132240 129840 153330 161550 172070 97349 76079 100610 111880 99323 107890 115220 111770 127350 143330 138540 144090 155930 137890 134340 154720 154330 163200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 167810000 25795 2207 24221 48361;48362 38985;38986 38985 2 9606 Homo sapiens -0.08407992682032273 STDTSCQMAGLR Unmodified 1325.5704 0.57038433 4547 Q9HBM1;C9JW94 SPC25 Kinetochore protein Spc25 yes no 0 0 0 5 0 1 38.919 39.011 2 1.3221E-09 9107 20230619_1885_Aki_TMTPro18x_K_F5 211.86 185.74 36606 23563 31563 33503 29225 35446 38029 36625 38802 36895 37203 30570 44738 36429 27040 46932 44524 33694 33764 21673 32466 33038 30807 35704 37857 37342 39424 37092 38510 31575 44587 37933 28878 46197 42356 32183 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35566000 25796 4547 24222 48363 38987 38987 1 9606 Homo sapiens -0.07937805158962874 STEEEEERLER Unmodified 1405.6321 0.63211618 2580 Q5T8U9;B4DSD4;Q8N4J0 C9orf41 UPF0586 protein C9orf41 yes no 0 0 1 1 0 1 33.067 33.067 3 6.7109E-17 7193 20230619_1880_Aki_TMTPro18x_K_F1 191.29 145.13 15782 12057 17354 20027 27663 30639 30542 29638 36338 26349 28313 32735 28329 23559 25765 28869 32845 30534 14599 11104 17680 19693 27994 30135 30779 30250 36339 27012 29456 32619 28799 24884 26651 29011 31342 28992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19093000 25797 2580 24223 48364 38988 38988 1 9606 Homo sapiens -0.05447458934486349 STEEPIVK Unmodified 901.47566 0.47566253 283 Q53S54;A0A024R475;Q13618-2;Q13618;B7Z600;Q13618-3 CUL3 Cullin-3 yes no 0 0 0 3 0 1 41.894 41.957 2 0.0080865 10434 20230619_1882_Aki_TMTPro18x_K_F3 105.57 46.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25798 283 24224 48365 38989 38989 1 9606 Homo sapiens 0.020983724236884882 STELLIR Unmodified 830.48617 0.48616764 2210;3750;4066 B4E380;K7EK07;B2R4P9;P84243;K7EMV3;A0A590UJJ6;B4DEB1;B2R6Y1;K7ES00;K7EP01;Q6NXT2;Q71DI3;Q16695;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST2H3A;HIST3H3;HIST1H3A;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.2;Histone H3.1t;Histone H3.1 no no 0 0 0 4.5 2.29 1 1 1 1 1 1 1 1 45.227 45.287 2 0.0075423 11703 20230619_1885_Aki_TMTPro18x_K_F5 124.37 32.789 16883000 13952000 14538000 15052000 15221000 17170000 16273000 16893000 17970000 16304000 17697000 17681000 19885000 16529000 16986000 17990000 19580000 19068000 15594000 12784000 14977000 15145000 15794000 17199000 16404000 17259000 18199000 16554000 18265000 17851000 20087000 17169000 17471000 18114000 18706000 18101000 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 201900000000 25799 2210;3750;4066 24225 48366;48367;48368;48369;48370;48371;48372;48373 38990;38991;38992;38993;38994;38995;38996;38997 38993 8 9606 Homo sapiens 0.06414399868765486 STEMEVHEESR Unmodified 1332.5616 0.56159378 3125 J3KP75;O75167-5;O75167-2;O75167;O75167-4 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 yes no 0 0 0 1 0 1 30.612 30.612 3 0.00010201 6231 20230619_1880_Aki_TMTPro18x_K_F1 103.88 91.904 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25800 3125 24226 48374 38998 38998 1 9606 Homo sapiens -0.09138455523793709 STEPELIQVK Unmodified 1142.6183 0.61830402 3940 Q71UA6;Q59ES3;Q15758;M0QXM4;B4DE27;Q15758-3;Q15758-2 SLC1A5 Amino acid transporter;Neutral amino acid transporter B(0) yes no 0 0 0 4.67 0.471 1 2 50.672 50.725 2;3 0.001994 14316 20230619_1883_Aki_TMTPro18x_K_F4 85.533 61.242 122680 103580 113440 127280 107970 132380 112670 121680 150160 124710 119200 132390 145800 117320 105060 157620 138660 134200 113390 95021 116000 126650 112910 133210 114520 125130 149610 126170 124950 133560 146030 123630 109690 156280 132310 127730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127690000 25801 3940 24227 48375;48376;48377 38999;39000 38999 2 9606 Homo sapiens 0.05269960095074566 STESLQANVQR Unmodified 1231.6157 0.61567826 2040 Q6NZ55;A8K4C8;P26373;J3QSB4 RPL13 60S ribosomal protein L13 yes no 0 0 0 4.6 1.02 1 1 2 1 36.298 36.367 2;3 1.2343E-16 8097 20230619_1886_Aki_TMTPro18x_K_F6 226.09 173.46 460030 316510 436320 426230 524830 589410 531450 509720 685580 509350 549310 489670 593250 478970 488910 474750 636770 517510 424770 290870 446520 423500 538690 581660 540020 526120 683780 514720 571390 497770 599130 494460 506990 479680 607000 491520 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3324199999.9999995 25802 2040 24228 48378;48379;48380;48381;48382 39001;39002;39003;39004;39005 39005 5 9606 Homo sapiens 0.009135046900837551 STFETEHAGQR Unmodified 1261.5687 0.56872807 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1;F8VU51;H0YI23;B4DMQ9 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 0 2.5 0.5 1 1 29.388 29.475 3 8.047E-31 5526 20230619_1881_Aki_TMTPro18x_K_F2 266.17 220.51 45734 28636 37662 43867 49270 57840 44627 48663 60369 48962 47664 53998 50850 41794 46053 43199 58367 52239 42165 26367 39143 43197 50212 57184 45748 50339 60092 49644 49679 54128 51578 43608 47572 43909 55684 49544 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 120240000 25803 3610 24229 48383;48384 39006;39007 39006 2 9606 Homo sapiens -0.05159354861052634 STFVLDEFK Unmodified 1084.5441 0.54407645 3510 Q53YD7;P26641;P26641-2;B4DUP0 EEF1G Elongation factor 1-gamma yes no 0 0 0 6 0.816 2 2 2 60.914 60.965 2;3 7.3659E-06 18503 20230619_1886_Aki_TMTPro18x_K_F6 203.02 157.39 3369100 2499200 2415500 3055700 1830400 3600300 2125800 3755500 2774100 1926900 1840200 1479500 1786200 1471600 1767400 2994000 1847500 1454300 3106200 2293600 2529300 3047000 1972100 3597700 2151100 3771700 2749600 2031800 1927300 1528300 1824400 1596700 1808800 2894300 1764100 1399100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2834800000 25804 3510 24230 48385;48386;48387;48388;48389;48390 39008;39009;39010;39011 39009 4 9606 Homo sapiens 0.005186170035130999 STFVLSNLAEVVER Unmodified 1562.8304 0.83042206 3985 Q53EY9;Q8NEZ5;Q8NEZ5-3;H3BTH6;H3BRE0;Q8NEZ5-2 FBXO22 F-box only protein 22 yes no 0 0 0 7.5 0.5 1 1 63.374 63.401 3 3.5826E-07 19390 20230619_1887_Aki_TMTPro18x_K_F7 138.55 121.18 49484 42885 41381 41578 39689 46432 53655 45125 54230 49074 45567 41970 48452 38791 51466 53423 48710 61504 45711 39253 42697 42196 41762 46576 53278 46314 54861 49182 47283 42847 49488 40931 52145 53886 46721 58285 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206700000 25805 3985 24231 48391;48392 39012 39012 1 9606 Homo sapiens 0.07152006715159587 STFVNILK Unmodified 920.53312 0.53311783 2847 D6RCP9;F5CTF3;D6RFG8;P27707 DCK Deoxycytidine kinase yes no 0 0 0 3.67 0.471 1 2 57.67 57.689 2;3 5.9445E-05 17356 20230619_1883_Aki_TMTPro18x_K_F4 186.13 81.09 266400 191810 237180 252480 189810 238970 232790 235910 238490 259720 253100 233160 262190 219870 241790 268330 262420 280490 245920 176190 242760 249810 202340 242520 232550 241890 243350 260350 259280 237550 266320 229890 247520 269460 251010 266220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 200280000 25806 2847 24232 48393;48394;48395 39013;39014;39015 39014 3 9606 Homo sapiens 0.06967259419911898 STGCDFAVSPK Unmodified 1167.523 0.52302343 76 A0A024R040;P55809;Q6IAV5;E9PDW2;B7Z609;P55809-2 OXCT1;OXCT Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes no 0 0 0 6.67 0.471 1 2 45.771 45.858 2;3 0.00025558 11685 20230619_1887_Aki_TMTPro18x_K_F7 144.77 120.62 238420 178270 196490 235130 255420 277660 288590 300810 295900 262670 293860 275370 311600 241720 266120 304020 332920 298900 220020 163730 204260 233310 261550 278020 289230 304600 300840 267880 302230 278040 315200 253850 275290 304120 317650 284070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 244980000 25807 76 24233 48396;48397;48398 39016;39017 39017 2 9606 Homo sapiens -0.054037163676639466 STGDIAGTVVPETNKEPR Unmodified 1869.9432 0.94321999 184 Q9UDY2-7;Q9UDY2;A0A1B0GTW1;Q9UDY2-3;A0A3B3ITE1;A0A024R233;A0A2R8YDH4;A0A3B3IRI3;B7Z954;Q9UDY2-6;A0A3B3ISZ5;A0A024R225;B7Z2R3;A0A3B3IU51;A0A3B3ISF1;A0A3B3IRV6;Q9UDY2-2;Q9UDY2-4;Q9UDY2-5;A0A3B3IS03;A0A3B3IT83 TJP2 Tight junction protein ZO-2 yes no 0 0 1 5 0 1 44.826 44.904 3 7.5287E-24 11613 20230619_1885_Aki_TMTPro18x_K_F5 206.62 196.25 35524 24039 32415 43597 38398 48078 40404 38393 46381 61554 53187 46300 68386 38764 45603 55497 49966 37786 32789 22176 33353 42420 39523 48014 40804 40510 47285 60484 54840 47438 68087 41196 47062 54487 47681 36122 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39440000 25808 184 24234 48399 39018 39018 1 9606 Homo sapiens 0.043046106505698845 STGEAFVQFASK Unmodified 1270.6194 0.61936665 44 Q53F48;A0A024QZK8;P31942-2;P31942;P31942-3 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes no 0 0 0 5.33 3.09 1 1 1 55.205 55.248 3 1.2469E-05 15797 20230619_1888_Aki_TMTPro18x_K_F8 132.56 103.03 817650 680540 732590 794240 752510 846550 778870 825770 800290 828600 794990 782390 903100 713140 860300 920690 827770 853950 755490 624000 751900 793580 781020 851680 784840 845010 814440 835710 820750 794310 915790 749120 874110 918000 792500 811700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3080099999.9999995 25809 44 24235 48400;48401;48402 39019;39020;39021 39021 3 9606 Homo sapiens -0.005118255360457624 STGEAFVQFASQEIAEK Unmodified 1840.8843 0.88430813 1427;1404 P31943;G8JLB6;A0A384MEJ3;E9PCY7;H0YB39;D6RBM0;D6RIU0;E5RGV0;E7EN40;E5RGH4;A0A384MDT2;P55795;B4DFK9 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 0 0 5 1.41 1 1 1 1 1 62.948 62.981 3 2.2748E-18 19470 20230619_1886_Aki_TMTPro18x_K_F6 176.08 155.99 1275300 1096700 1299900 1395500 1000400 1342900 1362000 1183300 1444600 1795300 1824800 1884100 1800600 1667700 1761500 2058900 1901700 2234100 1179800 1006400 1314800 1383800 1074200 1357900 1355300 1237200 1483400 1783900 1853900 1901100 1837500 1747800 1801400 2071500 1820500 2118900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 10386000000 25810 1427;1404 24236 48403;48404;48405;48406;48407 39022;39023 39023 2 9606 Homo sapiens -0.002498656437637692 STGEPLGHVPAR Unmodified 1219.6309 0.63093439 2701 C9JE51;C9J2R5;C9JIY7;C9JT42;C9J3U9;C9J1K7;C9J5C8;C9J4E3;C9JUT4;B7Z8W0;B7ZLW0;Q93052 LPP Lipoma-preferred partner yes no 0 0 0 5 0 1 33.718 33.803 3 3.9338E-12 7090 20230619_1885_Aki_TMTPro18x_K_F5 167.99 143.6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25811 2701 24237 48408 39024 39024 1 9606 Homo sapiens 0.029904162779530452 STGETIR Unmodified 762.38718 0.38718187 3470 P17987;E7ERF2;F5GZI8;F5GZ03;F5GYL4 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 2 0.816 1 1 1 28.627 28.689 2 0.03131 5254 20230619_1881_Aki_TMTPro18x_K_F2 94.662 6.6336 42210 17763 58360 57008 84933 76204 59308 83881 48363 37416 71236 94743 41757 56145 77836 22565 83549 70402 39035 16617 58302 54535 85212 75718 61056 83860 50726 41980 70952 92142 45406 57336 78511 26087 79793 66409 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29601000 25812 3470 24238 48409;48410;48411 39025 39025 1 9606 Homo sapiens -0.0035162309613951948 STGGAPTFNVTVTK Unmodified 1378.7092 0.70924429 3400 P07737;K7EJ44 PFN1 Profilin-1 yes no 0 0 0 1.75 0.829 2 1 1 51.08 51.118 2;3 5.564E-07 14910 20230619_1881_Aki_TMTPro18x_K_F2 134.43 115.81 1585500 1274700 1446000 1499500 1626800 1644500 1592600 1613200 1829400 1767900 1620500 1648500 1892900 1501200 1666300 2002900 1932900 1605700 1464800 1169100 1483200 1498200 1673900 1651900 1615300 1654100 1843100 1774900 1684600 1674400 1912200 1579900 1714800 1981600 1844600 1530500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5121500000 25813 3400 24239 48412;48413;48414;48415 39026;39027;39028 39028 3 9606 Homo sapiens 0.03503804072488492 STGGDFGNPLRK Acetyl (Protein N-term) 1289.6364 0.6364137 342 P20340;A0A024R5J5;P20340-2;A0A024R5H8;Q6FGX3;Q53ET8;P20340-3;F5H3K7;F5GX61 RAB6A Ras-related protein Rab-6A yes no 1 0 1 7 0 1 47.016 47.104 2 4.3053E-06 12177 20230619_1887_Aki_TMTPro18x_K_F7 64.654 45.017 127070 104210 115280 124240 110550 114530 118440 115240 124110 128950 142300 136560 158580 123780 137510 179230 160360 148620 117410 95577 118050 123720 115370 116620 119190 118100 126880 129800 145810 138000 160270 131030 141690 177380 153130 141520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 281030000 25814 342 24240 48416 39029 39029 1 9606 Homo sapiens 0.0031809506976969715 STGNFLTLTQAIDK Unmodified 1507.7882 0.7882229 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;A0A6I8PIP7;Q9P2J5-3;Q9NVP8 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 1.5 0.5 2 2 61.84 61.845 2;3 1.3469E-08 19403 20230619_1881_Aki_TMTPro18x_K_F2 149.09 115.41 278130 235660 258090 271030 240530 263800 272160 271650 288780 274520 270960 257730 285820 230990 334590 292580 262240 288770 257080 216040 263640 270800 252090 267560 273170 277090 292580 276770 279580 261600 293390 242490 335160 292950 251790 274220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 536390000 25815 1603 24241 48417;48418;48419;48420 39030;39031;39032 39032 3 9606 Homo sapiens 0.054640313068148316 STGSATSLASQGER Unmodified 1350.6375 0.63753591 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B4DL23 CEP170 Centrosomal protein of 170 kDa yes no 0 0 0 4.5 0.5 1 1 34.316 34.385 2;3 3.4187999999999998E-46 7279 20230619_1883_Aki_TMTPro18x_K_F4 340.93 302.63 79263 50181 74437 79484 84996 94989 73548 74632 99052 89603 109610 105780 106350 89659 96940 81578 127750 129800 73152 46222 76193 78006 87215 94372 75642 78064 99850 90289 111780 106070 108210 92671 100350 84852 121940 122760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109310000 25816 1960 24242 48421;48422 39033;39034 39033 2 9606 Homo sapiens -0.023757353520068136 STGSFVGELMYK Unmodified 1317.6275 0.6274885 4002 Q53GR7;Q9UJS0;Q9UJS0-2;B7Z2E2 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes no 0 0 0 4.5 3.5 1 1 60.579 60.579 2 5.6338E-07 18735 20230619_1880_Aki_TMTPro18x_K_F1 190.86 153.14 37332 31793 40297 34964 25627 39443 36924 41585 36015 47353 40374 40506 54834 42416 44064 51648 41563 40023 34551 29133 40448 35140 28153 39574 36590 42463 36985 47315 41853 41503 54953 44187 44899 51088 39781 38143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18537000 25817 4002 24243 48423;48424 39035;39036 39035 2 9606 Homo sapiens -0.01862014610924234 STGTETGSNINVNSELNPSTGNR Unmodified 2348.084 0.084023579 3001 G1UI16;Q29RF7;B3KMN2;Q96DB6 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 0 4 0 1 44.069 44.113 3 5.0839E-44 11299 20230619_1883_Aki_TMTPro18x_K_F4 228.85 220.7 31034 27757 33569 36218 34744 32072 38475 33317 32218 34763 45866 36350 39131 31385 45095 35313 35720 33952 28733 25473 33918 35826 36013 32793 38393 34018 33709 35091 46077 36699 40398 32751 45180 35385 34255 32269 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 240460000 25818 3001 24244 48425 39037;39038 39038 2 9606 Homo sapiens -0.03609507224564368 STGTFVVSQPLNYR Acetyl (Protein N-term) 1609.81 0.81002097 2459 B4DE91;P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes no 1 0 0 8 0 1 58.636 58.683 2 2.3625E-37 17241 20230619_1888_Aki_TMTPro18x_K_F8 175.93 160.04 17672 12377 14451 12922 13495 19655 15976 14725 17013 16407 15873 18450 16753 11958 18312 22493 23180 21298 16301 11346 14930 13100 14206 19243 15997 15428 17230 16553 16403 18420 17139 13113 18884 22350 22118 20249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149530000 25819 2459 24245 48426 39039 39039 1 9606 Homo sapiens 0.029508360553791135 STIETALK Unmodified 861.48075 0.48074791 1732 Q8N9Q7;A0A804HJB7;Q9BSH4 CCDC44;TACO1 Translational activator of cytochrome c oxidase 1 yes no 0 0 0 6 0 1 47.088 47.169 3 0.0024484 12652 20230619_1886_Aki_TMTPro18x_K_F6 103.83 57.407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25820 1732 24246 48427 39040 39040 1 9606 Homo sapiens 0.04446676286272577 STIGAYFLKPK Unmodified 1223.6914 0.69140938 962 A0A0A0MTB8;Q8NI36 WDR36 WD repeat-containing protein 36 yes no 0 0 1 6 0 1 54.99 55.066 3 4.8286E-05 16044 20230619_1886_Aki_TMTPro18x_K_F6 135.66 98.815 202670 188960 217370 221710 197880 215150 226790 222720 199320 230250 223940 197140 202890 157220 255510 179380 176530 128840 187680 173200 219320 221200 207670 218290 226260 227240 205750 231150 227660 200260 210000 164680 254100 177390 169330 123080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238610000 25821 962 24247 48428 39041 39041 1 9606 Homo sapiens 0.08851133608322925 STIGVDGSVYK Unmodified 1124.5714 0.57135383 2017 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 yes no 0 0 0 7 0 1 47.942 48.03 2 0.00053305 12676 20230619_1887_Aki_TMTPro18x_K_F7 128.27 91.874 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25822 2017 24248 48429 39042 39042 1 9606 Homo sapiens 0.014051005439114306 STIGVEFATR Unmodified 1079.5611 0.56112349 369;3946 H3BSC1;A0A024R5Z8;P62491;H3BMH2;P62491-2;Q15907-2;B4DMN1;Q15907 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B no no 0 0 0 6.5 0.5 1 1 47.623 47.707 2 2.2118E-07 12503 20230619_1887_Aki_TMTPro18x_K_F7 191.1 141.27 1368800 1213800 1239800 1342200 1061900 1303200 1304200 1256000 1445800 1544800 1592800 1496700 1660100 1353800 1516100 1635300 1596800 1684400 1265300 1112100 1268200 1344800 1125000 1319900 1305800 1294500 1471200 1544200 1629600 1517100 1684800 1416600 1549400 1641200 1527700 1599100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1330700000 25823 369;3946 24249 48430;48431 39043;39044 39044 2 9606 Homo sapiens 0.024525376093151863 STIIGESISR Unmodified 1061.5717 0.57168818 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 44.695 44.783 2 0.0011707 11577 20230619_1886_Aki_TMTPro18x_K_F6 135.72 87.435 423100 318420 378840 449210 399960 483330 463400 450660 538850 500200 531880 540610 553520 498540 493370 632100 613580 615060 390700 292660 389350 443130 415980 485180 465840 464080 544300 504240 547020 545790 561720 522530 510150 631690 585920 584360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 524230000 25824 3650 24250 48432;48433 39045 39045 1 9606 Homo sapiens 0.043365202637687617 STIVSIFK Unmodified 893.52222 0.52221879 4371 Q96JJ7;Q3B7X1 TMX3 Protein disulfide-isomerase TMX3 yes no 0 0 0 4 0 1 59.72 59.722 2 0.0012494 18201 20230619_1883_Aki_TMTPro18x_K_F4 145.63 86.428 92066 75625 85552 85074 89762 100620 108300 110060 113130 110340 100510 107860 117320 92714 107210 145280 121880 136820 85084 69322 87525 85395 93410 100800 108270 111750 114520 111400 104520 109160 118710 98944 110220 144540 116580 129990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41614000 25825 4371 24251 48434 39046 39046 1 9606 Homo sapiens 0.07119857045631761 STLDIVLANK Unmodified 1072.6128 0.61282471 2555 B4DNN4;Q53GZ5;P23921;B4E0I8 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 0 0 0 3.33 3.3 2 1 58.469 58.516 2;3 0.0033678 17190 20230619_1888_Aki_TMTPro18x_K_F8 74.267 49.251 73404 58861 75812 71026 93985 119560 87803 91165 131060 90471 101010 128530 90403 93048 78748 116400 116440 188690 67885 53996 77078 71358 96221 116520 90200 95042 129730 92723 104740 127490 92224 98410 82600 120480 111540 178190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54373000 25826 2555 24252 48435;48436;48437 39047;39048;39049 39049 3 9606 Homo sapiens 0.0794228130321244 STLEPVEK Unmodified 901.47566 0.47566253 1031;1463 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNV4;Q53FC7;B3KSM6;B2R6X5;A0A384NKX5;P17066;B4DHP5;P48741 HSPA1A;HSPA1B;HEL-S-103;HSPA6;HSPA7 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 0 0 0 3.5 0.5 1 1 43.398 43.455 2 0.00016003 11006 20230619_1883_Aki_TMTPro18x_K_F4 188.98 99.608 586820 378730 566930 794570 1009300 1097300 959980 981450 1192700 802120 1003500 916030 1043000 865230 839730 695650 1196300 989540 541750 350270 585800 770940 1012200 1083000 977270 1005600 1193000 824650 1039400 923160 1053900 885790 876160 718840 1139700 937520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 657090000 25827 1031;1463 24253 48438;48439 39050;39051 39051 2 9606 Homo sapiens 0.020983724236771195 STLFPSLFPR Acetyl (Protein N-term) 1205.6445 0.64445919 339 F5GXB9;F5H2T3;F8WDQ6;F5H3R3;A0A024R5G0;F5H6E4;G5EA39;P60006;P60006-2 ANAPC15;C11orf51 Anaphase-promoting complex subunit 15 yes no 1 0 0 3 0 1 66.448 66.484 2 0.00017475 21109 20230619_1882_Aki_TMTPro18x_K_F3 84.743 71.235 2742.4 2351.6 3276.3 2868.2 3902.5 2789.3 3630.3 3728.9 1997.6 3798.3 4072.9 4787.5 4293.2 4156.9 5484 4041.4 5141.4 4818.4 2540.7 2157 3288.9 2855.8 3978.4 2852.4 3629.3 3746.1 2218.6 3858.9 4100.2 4790.7 4433.4 4300.8 5528.2 4111.9 4920.3 4569.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3719100 25828 339 24254 48440 39052 39052 1 9606 Homo sapiens 0.049862740572052644 STLHNWMSEFK Unmodified 1378.634 0.63397086 2629 B7ZAX9;B4DZC0;O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 2 0 1 55.815 55.833 3 0.00057168 16883 20230619_1881_Aki_TMTPro18x_K_F2 95.018 73.461 32338 21834 34015 35273 29721 35019 34056 36593 39693 35256 31875 33803 37751 29472 36088 39367 37305 47725 29883 20110 34358 34501 31346 35442 34275 37236 39811 35661 33349 34239 38251 31100 36814 39851 35754 45203 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12591000 25829 2629 24255 48441 39053 39053 1 9606 Homo sapiens -0.04020076659571714 STLINSLFLTDLYPER Unmodified 1880.9884 0.98837927 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;C9J2Q4;C9J938;C9JB25;C9IY94;C9IZU3;C9JQJ4;C9JZI2;B5MD47;F8WB65;C9JFT1;A0A1B0GXJ2 SEPT2 Septin-2 yes no 0 0 0 1.5 0.5 2 2 65.195 65.199 2;3 6.0118E-19 20886 20230619_1881_Aki_TMTPro18x_K_F2 242.43 209.48 16603 16564 19358 17572 17586 22778 19945 24249 21770 24384 25635 25957 26283 23483 25256 26868 27372 26070 15395 15165 19403 17747 18489 22667 20051 24653 22241 24673 26153 26199 26762 24476 25825 26900 26160 24775 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 130260000 25830 3910 24256 48442;48443;48444;48445 39054;39055 39055 2 9606 Homo sapiens 0.08312461183777486 STLIPILHQK Unmodified 1148.6917 0.69174374 3001 G1UI16;Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 0 4 0 1 50.894 50.926 3 3.1211E-07 14404 20230619_1883_Aki_TMTPro18x_K_F4 145.89 98.995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25831 3001 24257 48446 39056 39056 1 9606 Homo sapiens 0.1233455332817357 STLLFGQR Unmodified 920.50797 0.50796571 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;Q6P164;Q66K46;Q2TA90 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 4 0 1 48.73 48.768 2 0.008542 13419 20230619_1883_Aki_TMTPro18x_K_F4 104.37 78.426 218910 193350 187740 195140 205400 267140 209260 212760 333330 113350 121920 158050 108090 103250 164870 126200 133520 144990 202280 177020 193650 197930 212710 263380 214430 218470 323360 121700 134770 156510 113620 109450 164710 127630 128130 137470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80711000 25832 2727 24258 48447 39057 39057 1 9606 Homo sapiens 0.0445320461733445 STLLGVLTHGELDNGR Unmodified 1680.8795 0.87949752 155 A0A024R1S5;O00178;B2RDW9;F5H716 GTPBP1 GTP-binding protein 1 yes no 0 0 0 6 1 1 1 58.104 58.158 3 1.7649999999999999E-19 17058 20230619_1887_Aki_TMTPro18x_K_F7 207.79 172.59 48624 33330 42872 47529 42240 48412 43797 48728 56171 57020 52821 59660 60784 50124 55631 63854 51602 66351 44871 30650 44045 46830 44018 48879 44475 49971 56426 57256 54748 60101 61521 52757 56490 64061 49513 62940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95857000 25833 155 24259 48448;48449 39058 39058 1 9606 Homo sapiens 0.06629295004131563 STLLINQPQYAWLK Acetyl (Protein N-term) 1715.9247 0.9246568 1415 P49419-2;A0A384MDZ8 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 1 0 0 3 0 1 65.655 65.689 3 1.0629E-06 20805 20230619_1882_Aki_TMTPro18x_K_F3 84.289 68.065 76865 72381 77413 63535 82685 104100 71828 80673 105490 29693 27916 21098 25269 25176 55933 27229 31776 20993 71146 66183 78591 65499 85348 101650 74085 82616 102240 32653 32190 22018 27377 25926 54840 27080 30562 20045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89126000 25834 1415 24260 48450 39059 39059 1 9606 Homo sapiens 0.09533145537329801 STLLLLLTGK Unmodified 1057.6747 0.67469669 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 6.5 0.5 1 1 64.995 65.03 2;3 1.2377E-10 20088 20230619_1887_Aki_TMTPro18x_K_F7 182.39 157.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25835 1296 24261 48451;48452 39060;39061 39061 2 9606 Homo sapiens 0.14816632722386203 STLMDTLFNTK Unmodified 1269.6275 0.6274885 1492;3875 D6RGI3;A0A384P5S0;D6RER5;Q9NVA2;Q9NVA2-2;D6RDU5;D6RDP1;D6R9Y6;Q14141;Q541S4;Q548C9;B1AMS2;Q6B514;B4DZW0;Q8NFH9;Q14141-2;Q14141-4;B4DPT4;Q6NT82;Q8NFI2;Q8NFI0;Q14141-3;Q8NFI1 SEPT11;SEPT6 Septin-11;Septin-6 no no 0 0 0 2.5 0.5 1 1 62.748 62.767 3 1.6874E-09 19862 20230619_1881_Aki_TMTPro18x_K_F2 187.85 151.45 536080 456680 512020 650510 490380 567990 642790 619010 696940 759930 666880 702340 805290 606780 723310 845640 714310 793270 495640 419580 522760 639640 515360 581590 640860 632830 706350 758490 692020 712340 813040 642070 737170 842630 684080 753710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 467590000 25836 1492;3875 24262 48453;48454 39062;39063 39062 2 9606 Homo sapiens 0.0034598538904901943 STLMDTLFNTK Oxidation (M) 1285.6224 0.62240312 1492;3875 D6RGI3;A0A384P5S0;D6RER5;Q9NVA2;Q9NVA2-2;D6RDU5;D6RDP1;D6R9Y6;Q14141;Q541S4;Q548C9;B1AMS2;Q6B514;B4DZW0;Q8NFH9;Q14141-2;Q14141-4;B4DPT4;Q6NT82;Q8NFI2;Q8NFI0;Q14141-3;Q8NFI1 SEPT11;SEPT6 Septin-11;Septin-6 no no 0 1 0 8 0 1 56.033 56.095 3 7.8928E-05 16180 20230619_1888_Aki_TMTPro18x_K_F8 115.18 95.069 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25837 1492;3875 24262 48455 39064 39064 1000 1 9606 Homo sapiens -0.008983184735598115 STLNEIYFGK Unmodified 1170.5921 0.59208927 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;Q7L4N0 CAPZB F-actin-capping protein subunit beta yes no 0 0 0 4.86 3.09 2 1 2 2 57.098 57.131 2;3 6.876E-07 16590 20230619_1888_Aki_TMTPro18x_K_F8 217.12 172.42 787760 681500 746450 715400 658120 678640 757720 714250 797540 1006400 865810 943720 1013200 791310 913360 1136800 894860 1033300 728360 624190 760080 719800 692900 690440 759740 735170 814340 999070 892190 955500 1024100 839810 930810 1130300 857330 982000 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2449700000 25838 1434 24263 48456;48457;48458;48459;48460;48461;48462 39065;39066;39067;39068 39068 4 9606 Homo sapiens 0.013616909235452113 STLNPNAK Unmodified 843.44503 0.4450311 4285;2986 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;A0A024QZ91;A0A024QZC0;S4R3J6;F8W0B5;A0A2R8Y7P6;V9GY86;Q2M2R5;F8WB06;F8VQP2;A0A2R8Y5A6;A0A2R8YDM9;Q99700;A0A2R8Y7E6;H0YH87;A0A5F9ZHX3;A0A5F9ZHW5;Q99700-5;Q99700-2;Q99700-4;A0A5F9ZI57;A0A5F9ZHH4;F8WB05 ATXN2L;ATXN2 Ataxin-2-like protein;Ataxin-2 no no 0 0 0 8 0 1 37.609 37.595 2 0.0022146 8540 20230619_1888_Aki_TMTPro18x_K_F8 130.28 89.292 20196 12265 22404 25669 30642 43986 29882 31843 29292 17660 31364 39664 27248 28806 31059 10315 38984 34162 18662 11346 22736 25018 31222 42747 30158 32988 29895 19297 31971 38844 28165 29088 31831 12072 37190 32212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15014000 25839 4285;2986 24264 48463 39069 39069 1 9606 Homo sapiens 0.017046388292783377 STLPDADRER Unmodified 1158.5629 0.56291441 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3 ACTN4 Alpha-actinin-4 yes no 0 0 1 1.5 0.5 1 1 30.874 30.907 3 2.4688E-07 6028 20230619_1881_Aki_TMTPro18x_K_F2 184.9 165.24 84231 54279 65682 76833 79688 83504 87295 83854 107630 85319 94176 103400 106510 81527 86050 88040 118930 95487 77641 49924 68544 75800 81907 83930 88166 85701 107890 86732 97839 103360 107320 85201 89670 88792 113320 90701 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 252460000 25840 1069 24265 48464;48465 39070 39070 1 9606 Homo sapiens -0.010024533727346352 STLQTLPEIVAK Unmodified 1298.7446 0.74456717 2831 D3DVQ1;O95202 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes no 0 0 0 4.5 3.5 1 1 58.34 58.363 3 0.00014147 17135 20230619_1888_Aki_TMTPro18x_K_F8 105.65 77.971 160250 134720 162610 178760 166990 191610 181480 186260 196710 198040 192010 192750 220420 189240 207770 215240 202150 230920 148220 123690 165160 177040 173540 192620 182660 190960 199450 199360 198510 195830 223450 196740 211240 216740 193670 219050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 471130000 25841 2831 24266 48466;48467 39071;39072 39072 2 9606 Homo sapiens 0.10714466600325068 STLQTMESDIYTEVR Unmodified 1771.8298 0.82982971 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 3 0 1 61.117 61.146 2 1.4767E-51 18881 20230619_1882_Aki_TMTPro18x_K_F3 295.78 279.53 36048 28027 30230 37571 36492 43333 41345 39681 45181 40862 48566 55138 47152 47705 48525 57631 50882 61503 33277 25742 31340 37215 37577 43282 41515 40836 45922 41678 49663 55083 48287 49937 49506 57943 48735 58336 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92536000 25842 673 24267 48468 39073 39073 1 9606 Homo sapiens -0.025212007868276487 STLSTYLEDCK Unmodified 1315.5966 0.5965823 3026 R4GMW6;H0Y6Z9;R4GMX3;Q9UBI1;B3KY73 COMMD3-BMI1;COMMD3 COMM domain-containing protein 3 yes no 0 0 0 6 0 1 54.764 54.841 3 0.040897 16004 20230619_1886_Aki_TMTPro18x_K_F6 34.185 20.523 42075 34753 37958 42707 43646 50641 44855 46801 63683 35512 35064 30246 31735 30014 39808 40181 39784 33296 38876 31883 39019 42575 44982 50508 45717 47767 62580 36400 37159 30981 32919 31487 40337 39832 38021 31721 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33067000 25843 3026 24268 48469 39074 39074 1 9606 Homo sapiens -0.04859212715837202 STLTDSLVCK Unmodified 1122.5591 0.55907458 3447 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 0 0 7.2 0.748 1 2 2 51.073 51.15 2;3 1.7921E-13 13986 20230619_1888_Aki_TMTPro18x_K_F8 222.42 168.95 1135900 954520 1038300 1025600 962230 1098300 1046100 1072100 1168900 1426800 1288400 1205900 1529900 1369400 634430 2184100 789740 1350000 1049800 874530 1061600 1031500 1008400 1104900 1054300 1106300 1190400 1416200 1324800 1241900 1511600 1448700 678510 2130200 757990 1289100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 9310300000 25844 3447 24269 48470;48471;48472;48473;48474 39075;39076;39077 39077 3 9606 Homo sapiens 0.002697408091989928 STLYVSPHPDAFPSLR Acetyl (Protein N-term) 1827.9155 0.91554867 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A1U9X9C1;B4DT32;A0A140T954;A2ABF4;A0A0G2JJT9 VARS Valine--tRNA ligase yes no 1 0 0 6.5 0.5 1 1 57.837 57.898 2 9.495500000000001E-34 17232 20230619_1886_Aki_TMTPro18x_K_F6 170.52 145.67 48510 43254 44436 49671 52310 50164 57470 56755 61629 56469 65116 53355 60046 50255 63646 62616 58099 67411 44850 39645 45625 49659 53793 50870 57771 57516 62659 56992 66358 54266 61597 52616 64350 62994 55707 63943 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97495000 25845 725 24270 48475;48476 39078;39079 39078 2 9606 Homo sapiens 0.03470752181010539 STMGKPQR Unmodified 903.45964 0.45963531 3732 P62906;Q1JQ76;A0A024RCW3 RPL10A 60S ribosomal protein L10a;Ribosomal protein yes no 0 0 1 3 0 1 30.857 30.943 3 0.031815 5960 20230619_1882_Aki_TMTPro18x_K_F3 66.351 43.521 114360 54848 170590 160220 269470 252740 179360 241880 158030 82397 154370 126430 85726 84826 205330 32462 110510 67122 105910 51146 169960 154170 269080 248120 185640 243340 161770 93158 155610 125040 95318 86057 200470 36007 106360 63544 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93051000 25846 3732 24271 48477 39080 39080 1 9606 Homo sapiens 0.004043877057711143 STMLELEK Oxidation (M) 965.47395 0.47394797 897 A0A090N7T9;Q12765;Q12765-2;A0A024RA21;Q12765-3;B4DH22;B4DIV7 SCRN1 Secernin-1 yes no 0 1 0 4 0 1 46.565 46.608 2 0.0021911 12433 20230619_1883_Aki_TMTPro18x_K_F4 121.05 56.784 76568 61017 65781 91013 91950 85701 82402 84172 107340 88035 102350 92070 88170 73939 95935 104260 113450 100970 70706 56105 68243 89306 93126 87044 84395 86226 107670 88919 104570 92749 90827 78469 98425 104070 108290 95981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62185000 25847 897 24272 48478 39081 39081 510 1 9606 Homo sapiens -0.0101700465659178 STMLELEK Unmodified 949.47903 0.47903335 897 A0A090N7T9;Q12765;Q12765-2;A0A024RA21;Q12765-3;B4DH22;B4DIV7 SCRN1 Secernin-1 yes no 0 0 0 5 0 1 51.857 51.931 3 0.021761 14580 20230619_1885_Aki_TMTPro18x_K_F5 72.879 31.85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25848 897 24272 48479 39082 39082 1 9606 Homo sapiens 0.002272992060170509 STMQELNSR Oxidation (M) 1080.487 0.48697227 2786 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 1 0 2.5 0.5 1 1 29.317 29.404 2 0.059652 5384 20230619_1882_Aki_TMTPro18x_K_F3 62.582 30.262 + 2298.3 3229.4 17364 13068 33809 18539 103650 9581.6 37338 1243 2286.7 6175.5 2629.1 44918 6694.6 956.37 27093 2603.1 2250 3026.1 16685 12438 35274 18158 98033 10470 40203 1703 4113.5 7338 3206.4 42534 7815.7 1111.4 25555 2503.2 2 2 2 2 2 2 2 2 2 1 2 2 2 2 2 1 2 1 16865000 25849 2786 24273 48480;48481 39083 39083 1662 1 9606 Homo sapiens -0.05005173544509489 STNCFGDNDPIDVCEIGSK Unmodified 2126.8885 0.88848358 4504 Q9H2U2;Q9H2U2-2;H0Y9D8;B4DR66;D6R967;B4DFH3;D6RGV9 PPA2 Inorganic pyrophosphatase 2, mitochondrial yes no 0 0 0 4 0.816 1 1 1 57.239 57.271 3 1.0069E-07 17296 20230619_1882_Aki_TMTPro18x_K_F3 116.13 112.41 58788 58670 62042 66986 53703 63416 67729 61868 78730 70513 65964 74192 79776 64796 76587 86905 83168 86366 54459 53751 62667 66934 56849 64373 67808 63581 79074 70932 68957 74831 80826 68332 78355 86912 79533 82025 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 263840000 25850 4504 24274 48482;48483;48484 39084;39085 39084 2 9606 Homo sapiens -0.129885122747055 STNDRDATPLSR Unmodified 1331.643 0.64295564 1361 E7ETD6;E9PE19;A0A2R8Y7Q1;J3QQK4;Q12830-4;Q12830-2;Q12830;F5GXF5 BPTF Nucleosome-remodeling factor subunit BPTF yes no 0 0 1 3.5 0.5 1 1 29.759 29.839 3 7.9874E-06 5493 20230619_1883_Aki_TMTPro18x_K_F4 144.92 117.05 24543 19616 20752 20122 32736 27320 33265 27160 31312 25958 31594 26736 29072 26758 28698 29449 36632 24917 22662 17969 21569 20389 32994 27108 33422 27733 31999 26336 32265 27136 29756 27726 29625 29301 34892 23757 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32492000 25851 1361 24275 48485;48486 39086;39087 39087 2 9606 Homo sapiens -0.00960011769529956 STNEAMEWMNNK Oxidation (M) 1469.5915 0.5915137 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;B0AZU6;B4DSE8;B0AZS1;B0AZT0;B4DN48 HSPA4;HEL-S-5a Heat shock 70 kDa protein 4 yes no 0 1 0 5 0 1 48.768 48.844 3 0.0070123 13247 20230619_1885_Aki_TMTPro18x_K_F5 64.945 54.335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25852 3544 24276 48487 39088 39088 2211 1 9606 Homo sapiens -0.12449839850091848 STNGDTFLGGEDFDQALLR Unmodified 2054.9545 0.95451296 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;Q2F839 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 3 0.816 1 1 1 62.362 62.377 3 0.0020606 19345 20230619_1883_Aki_TMTPro18x_K_F4 69.986 61.044 15106 14783 17189 15259 15277 21723 17069 16591 23653 17994 18108 20809 20184 17545 23739 21354 20743 23749 14001 13532 17253 15463 16112 21351 17310 17340 23488 18213 18959 20881 20706 18407 23899 21539 19897 22521 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102930000 25853 1488 24277 48488;48489;48490 39089 39089 1 9606 Homo sapiens -0.03076612045924776 STNLNCSVIADVR Unmodified 1447.7089 0.70892672 4342 Q96EL3 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 0 0 0 6 0 1 47.869 47.95 2 2.9881999999999996E-28 13017 20230619_1886_Aki_TMTPro18x_K_F6 264.32 234.07 90414 79253 87467 95080 84019 90487 99987 103200 104920 101920 99550 94143 110800 97472 92941 117050 109400 116790 83618 72675 89093 94687 87946 92157 100060 104510 106420 102840 102840 96102 111920 101470 95867 117220 104570 110900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83014000 25854 4342 24278 48491 39090 39090 1 9606 Homo sapiens 0.002980610809800055 STNPGISIGDVAK Unmodified 1257.6565 0.65648044 3240 O15347;E9PES6;E7ES08;E7EQU1 HMGB3 High mobility group protein B3 yes no 0 0 0 6.5 0.5 1 1 50.512 50.594 2;3 1.551E-06 13826 20230619_1887_Aki_TMTPro18x_K_F7 139.86 107.25 169500 125860 150230 144720 164260 185810 174820 184700 206810 191740 193900 208510 225280 182230 182640 213010 218930 212020 156490 115440 154400 145210 169910 184750 176670 188870 208390 193930 200990 209990 226870 190500 188630 213430 209070 201410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3254199999.9999995 25855 3240 24279 48492;48493 39091;39092 39092 2 9606 Homo sapiens 0.037958460097115676 STNPGISIGDVAKK Unmodified 1385.7514 0.75144346 3240 O15347;E9PES6;E7ES08;E7EQU1 HMGB3 High mobility group protein B3 yes no 0 0 1 2 0 1 48.129 48.2 3 8.7805E-06 13606 20230619_1881_Aki_TMTPro18x_K_F2 118.52 98.68 103050 114500 116030 102200 149850 121650 130020 128930 121500 102030 101700 69872 83215 60040 117550 85038 74800 56320 95602 104650 117160 104630 152010 121910 132000 130450 123460 103570 104350 72185 87030 63614 116390 83567 71853 53865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194010000 25856 3240 24280 48494 39093 39093 1 9606 Homo sapiens 0.0739977948089745 STNVTVAAAR Unmodified 988.53016 0.53015772 4029 Q5BKZ1;A0A0A0MRN4;Q5BKZ1-3 ZNF326 DBIRD complex subunit ZNF326 yes no 0 0 0 6.5 0.5 1 1 33.909 33.973 2 4.3517E-05 6879 20230619_1887_Aki_TMTPro18x_K_F7 142.83 108 45495 28392 47042 48801 62677 68788 52757 65380 67248 42166 51315 42760 48283 40434 54202 33707 53983 46116 42018 26182 47900 47837 63617 67918 54239 66349 66974 43918 53222 43334 49655 41457 54880 34747 51598 43698 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 24091000 25857 4029 24281 48495;48496 39094;39095 39095 2 9606 Homo sapiens 0.03543384295085161 STPAEDDSRDSQVK Unmodified 1533.6907 0.6906937 3999 Q53GG0;Q9UHB6;F8VQE1;B4DN52;Q9UHB6-2;F8VS07;B3KTW2;Q9UHB6-3;F8VRN8 LIMA1 LIM domain and actin-binding protein 1 yes no 0 0 1 2 0 1 33.356 33.415 3 0.031462 7055 20230619_1881_Aki_TMTPro18x_K_F2 54.898 38.957 11412 7123.5 14507 15160 19461 20329 16996 19961 15282 13153 18632 19603 16574 16010 17321 8398.6 23405 17983 10560 6590.9 14557 14702 19731 20140 17240 20226 15788 13849 18881 19471 17034 16232 17882 9131.4 22297 16998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20493000 25858 3999 24282 48497 39096 39096 1 9606 Homo sapiens -0.054804023599899665 STPAITLESPDIK Unmodified 1370.7293 0.72931103 311 P00387-3;P00387;P00387-2;A0A8J8YWN6;A0A8I5KR71;A0A024R4X0;A0A8I5KW26;A0A8J8Z3C6;A0A8I5QKX1;A0A8I5KYU1;A0A8I5QKT9;A0A8I5KPU0;B1AHF3;A0A8I5KVD2;A0A8I5QKL2;A0A8I5KTF9;A0A8I5KUA5;A0A8I5KNV1;A0A8I5KXI5 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form;NADH-cytochrome b5 reductase yes no 0 0 0 6 0 1 54.595 54.672 3 3.1879E-06 15872 20230619_1886_Aki_TMTPro18x_K_F6 133.32 37.262 182590 128410 144820 191070 159060 230370 202520 223010 279380 219530 234440 300580 310440 289750 206000 355410 346100 415850 168400 118130 150850 188180 165910 229550 203990 228190 278320 224680 246300 301140 309830 302650 219890 358970 330270 394080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2023099999.9999998 25859 311 24283 48498 39097 39097 1 9606 Homo sapiens 0.05877555012466473 STPAITLESPDIKYPLR Unmodified 1900.0306 0.030578432 311 P00387-3;P00387;P00387-2;A0A8J8YWN6;A0A8I5KR71;A0A024R4X0;A0A8I5KW26;A0A8J8Z3C6;A0A8I5QKX1;A0A8I5KYU1;A0A8I5QKT9;A0A8I5KPU0;B1AHF3;A0A8I5KVD2;A0A8I5QKL2;A0A8I5KTF9;A0A8I5KUA5;A0A8I5KNV1;A0A8I5KXI5 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form;NADH-cytochrome b5 reductase yes no 0 0 1 1 0 1 56.776 56.776 3 6.1936E-11 17162 20230619_1880_Aki_TMTPro18x_K_F1 159.02 147.96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25860 311 24284 48499 39098 39098 1 9606 Homo sapiens 0.11656436592147656 STPDPPLGGTPR Acetyl (Protein N-term) 1235.6146 0.61461563 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A994J4Z2;A5D6X0;A0A2R8Y866 SMARCA4 Transcription activator BRG1 yes no 1 0 0 2 0 1 42.88 42.961 2 0.072135 11188 20230619_1881_Aki_TMTPro18x_K_F2 51.276 38.92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25861 1348 24285 48500 39099 39099 1 9606 Homo sapiens 0.006232903212094243 STPEYFAER Unmodified 1098.4982 0.49818889 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;A0A0S2Z377 ANXA6 Annexin A6;Annexin no no 0 0 0 3 0.816 1 1 1 42.513 42.576 2 7.908E-06 10693 20230619_1882_Aki_TMTPro18x_K_F3 177.97 158.14 899690 754050 829370 870560 979600 1057000 971680 932080 995760 1153400 1316400 1277300 1240900 1186000 1115200 1409800 1504100 1459800 831500 691320 850830 872140 1005300 1052100 981190 966810 1026400 1157400 1331900 1288500 1264000 1237700 1159300 1415000 1435000 1386200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1155500000 25862 1062;1064 24286 48501;48502;48503 39100;39101 39101 2 9606 Homo sapiens -0.0471202817871017 STPIQWLPGHDLQSLSQGNPENNR Unmodified 2687.3052 0.30519016 4192 Q86VY4 TSPYL5 Testis-specific Y-encoded-like protein 5 yes yes 0 0 0 8 0 1 57.271 57.323 3 3.5352999999999997E-53 16695 20230619_1888_Aki_TMTPro18x_K_F8 244.31 238.65 19086 19123 18354 20244 17518 18956 20628 22126 17112 23847 21430 20358 20345 18626 18715 22878 22579 24295 17667 17508 18705 20348 18331 19349 20524 22425 17837 23880 21732 20768 20732 19497 19297 22988 21578 23054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63571000 25863 4192 24287 48504 39102 39102 1 9606 Homo sapiens 0.029029775424987747 STPKPIPILAAGFCSDK Unmodified 1800.9444 0.94440596 3916 Q15061;C9IZK7 WDR43 WD repeat-containing protein 43 yes no 0 0 1 4 0 1 58.787 58.789 3 4.9456E-06 17803 20230619_1883_Aki_TMTPro18x_K_F4 100.67 81.839 111240 83061 101170 107860 103160 109500 121820 116040 121050 141040 126830 121800 137620 103590 108070 145690 118650 89983 102730 76274 103690 106920 107460 110760 121730 118770 123730 140550 130270 123920 138610 109670 111200 142530 113220 86162 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37424000 25864 3916 24288 48505 39103;39104 39104 2 9606 Homo sapiens 0.07597153485767194 STPLTATPGGR Unmodified 1056.5564 0.55637247 2094 H0YJL5;Q5TZX9;B2RE64;A8K6M4;Q9UEU0-2;Q9UEU0 VTI1B Vesicle transport through interaction with t-SNAREs homolog 1B yes no 0 0 0 8 0 1 37.272 37.257 2 0.00021124 8388 20230619_1888_Aki_TMTPro18x_K_F8 128.27 81.704 22212 18175 26102 22063 25553 29818 25281 28041 38621 26223 34133 31156 30031 26465 30043 26117 35251 31541 20569 16672 26160 22075 26606 29517 25929 28706 38353 26776 35027 31256 30793 27437 30813 26571 33652 29914 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13142000 25865 2094 24289 48506 39105 39105 1 9606 Homo sapiens 0.030356534665770596 STPPTLETVR Unmodified 1099.5873 0.58733824 237 A0A024R3D4;Q8ND24;E9PN76;Q8ND24-2 DKFZp547C195;RNF214 RING finger protein 214 yes no 0 0 0 5 0 1 41.307 41.392 2 0.010662 10117 20230619_1885_Aki_TMTPro18x_K_F5 82.287 38.152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25866 237 24290 48507 39106 39106 1 9606 Homo sapiens 0.04152806780825813 STPVIVSATTK Unmodified 1102.6234 0.6233894 3790 Q02952-3;Q02952-2;Q02952 AKAP12 A-kinase anchor protein 12 yes no 0 0 0 1.5 0.5 1 1 46.58 46.619 3 0.015875 13014 20230619_1880_Aki_TMTPro18x_K_F1 63.691 44.946 22782 13673 20114 20468 17087 19729 22184 21334 23556 23705 30764 27808 30887 21784 26057 29434 27618 29359 21010 12589 20612 20100 18136 20034 22123 21754 24193 23948 31205 27863 31253 23092 26688 29441 26422 27879 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96568000 25867 3790 24291 48508;48509 39107 39107 1 9606 Homo sapiens 0.07618263957647287 STPVNVPISQK Unmodified 1168.6452 0.64518747 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 1.5 0.5 1 1 46.282 46.322 3 0.00020933 12848 20230619_1880_Aki_TMTPro18x_K_F1 110.44 68.937 54624 40614 47176 51313 52888 54624 53641 54587 63462 65818 77139 69348 71055 64816 66997 72678 72491 68764 50423 37286 48647 50986 54505 54996 54363 56067 64638 66024 78177 70123 72542 67396 68533 72684 69280 65368 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150050000 25868 3981 24292 48510;48511 39108 39108 1 9606 Homo sapiens 0.06761068706236983 STPVTSAVQIPEVK Unmodified 1454.7981 0.7980593 2331 B2RNR6;Q96KR1;A8K849 ZFR Zinc finger RNA-binding protein yes no 0 0 0 8 0 1 54.226 54.298 3 8.7626E-07 15403 20230619_1888_Aki_TMTPro18x_K_F8 127.79 103.81 72977 63077 73102 75776 85430 85949 89507 80281 88199 89677 95193 88732 104290 81201 96352 102780 97598 98549 67504 57845 74448 75624 87777 86042 89960 82681 90239 90102 97709 89918 105710 85185 98221 102680 93375 93644 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230910000 25869 2331 24293 48512 39109 39109 1 9606 Homo sapiens 0.08885219312151094 STPVTVVLPDTK Unmodified 1255.7024 0.702368 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 7 0 1 53.995 54.062 3 1.4928E-05 15376 20230619_1887_Aki_TMTPro18x_K_F7 129.84 108.08 76339 67293 69675 81742 74442 86492 82219 80164 93368 90649 94468 88602 100520 77440 85537 93435 94457 83986 70571 61714 71485 81414 77213 86953 82794 82628 94540 90998 97087 89682 101630 81121 87774 93097 90217 79909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96761000 25870 2436 24294 48513 39110 39110 1 9606 Homo sapiens 0.08474491191918787 STPYECGFDPMSPAR Unmodified 1713.7127 0.71269147 3 A0A6B9R9Q2;A0A075XDK3;R9Y638;R9Y4I0;R9Y3S3;Q9B0N2;Q9B0N1;Q8WCY4;I6QHG6;R9YBA6;F2WIH8;I3Q3L2;G9LGD3;G9LE27;G9LDG9;G9LCN3;G9LBX3;G9LBB5;I6ME00;G9LI31;S5SA55;U5ZAD9;T1Q5E5;Q4VFA1;Q7YCD3;Q58F37;Q4F698;Q4F4E8;Q4EWX2;Q27H02;L7XJX4;Q8HG26;U3KVH5;Q8HG27;Q8WCW0;X5BZL0;V9PAU6;V9N9E3;V9IWL9;G5D8J7;G3CA14;G3CA01;A0A059RL21;H9E7I7;H9E7E8;I3Q8N0;A0A343LPZ3;A0A345AK79;A0A059RR35;A0A059RM18;H9E7L3;H9E7K0;A0A059RKZ7;A0A059RKU1;A0A059RKT2;A0A059RK60;A0A059RK50;A0A059RK06;A0A059RJC6;A0A059RLU6;H9PNQ5;F8VA07;H9T752;F8S016;F2WIP3;G3EBM7;G9LIK0;G9LK46;G9LKB1;I1E497;H9T0Z6;G3C9Y8;H9SLH6;H9S9B2;H9RU15;H9RFM6;H9QW90;H9QK01;H9QEG4;Q6VH98;A0A059RIM5;Q6VHF8;Q6VK65;F1B7M6;F1B6S1;F1AIH3;E9NK37;E9LAD9;E7CNQ0;E5LFI8;F2WE31;E5EXC8;D7NUT9;D6R6Z4;C9D525;C8YGF5;C8Y8R4;C7SJX3;A0A8A0WP50;E5EWG6;A0A7G5XR72;C8XZ47;B2XLB2;C3W5L7;B2XPV3;K9R2C4;B9ED50;B9ECU6;B9ECT3;B9EE38;B8XZE8;B2XQE7;B1W6Z3;A0A023QSC6;A9LYR7;A6Z8G6;A6YXV4;A4ZN04;A4GWW4;A0A8D5ATY0;F2WID9;A0A3G5BZA8;A0A346M0I6;A0A410RF73;A0A6B9RCL6;A0A6B9RC33;A0A6B9RBS2;A0A6B9RBA4;A0A6B9Q8S6;A0A649YGX7;A0A649YEA4;A0A6G7GDB8;A0A6G7GC43;A0A410RF23;A0A7T5BNP1;F2WIF2;F2WIK4;A0A343R0C4;Q7YCC6;Q7GXZ5;A0A4D6CM95;A0A6G9L723;A0A345ALS5;A0A343R0H6;X5CF60;A0A345AJX5;A0A3Q9CWV6;A0A345AJR0;A0A343SU47;A0A343RU25;A0A343R0P3;A0A343R0G4;A0A346M016;A0A343R0F1;A0A345AJB7;A0A3S8V847;A0A3S9JI14;A0A410REW8;A0A7D5T6K2;A0A6H0MXE8;Q6VHJ8;A0A059RIG8;A0A342Y3L0;A0A059R9C6;A0A059RWJ2;A0A059RWX3;A0A059RXK7;A0A0B4L5I9;A0A1B0VYQ3;A0A059S1Z0;A0A059S249;A0A059RW30;A0A059S440;A0A096W024;A0A096WBL4;A0A343JJ37;A0A059S192;A0A343JKG2;A0A059RIY5;H9E7Q2;A0A343JKK8;A0A343JJA9;A0A059RVX9;A0A059RUP4;A0A059RUX7;A0A141ZRI5;A0A1W5XF96;A0A141ZSM5;A0A141ZSN8;A0A1L7NY68;A0A141ZSX9;A0A143FYI4;A0A1J0QPA6;A0A0E3DIA4;A0A343JRN4;A0A0N6YNA0;A0A096WY90;A0A343KLK7;A0A059RU53;A0A059RUH5;A0A059RUL6;H9E796;A0A343KKE5;A0A343SU60;E7E2P6;A0A3S9JI35;A0A141ZQA6;A0A141ZSL2;A0A3S9JHR4;A0A8A0WQ81;A0A343JJE8;G3CA53;A0A343KKH3;A0A059QT02;A0A059QPH2;A0A345ALM9;A0A7D5PK10;A0A059RUV4;A0A059RS30;A6ZGZ8;Q8HNR5;A0A075X768;A0A343LEV5;A0A6B9RAL4;O21102;H9E783;A0A493QZN1;V9NA97;A0A059RP26;H9E7R5;A0A059RBC5;H9E7V4;A0A3S5HPF6;A0A059R8S9;A0A141ZSJ9;A0A141ZRF9;H9E7H4;A0A059QIM8;H9E7C2;A0A493QZP4;A0A3S9JHV6;A0A059RTK4;A0A059RI11;A0A342Y227;A0A141ZSC1;A0A059RNK9;A0A059QTD3;A0A059QSQ3;A0A059QSE5;A0A059QIJ6;A0A059QIB0;A0A059QHV3;A0A059RP55;A0A059QHC0;A0A059QF42;A0A059QF38;A0A059QER5;A0A059QEL9;A0A059QEE7;A0A059QEA2;A0A059QDH0;A0A059QG38;A0A059QCA6;A0A059RPJ4;A0A059RPW7;A0A059RPQ1;A0A059RRR7;A0A059QVT6;A0A059RMK8;A0A059QU57;A0A059RN72;A0A059RNS3;A0A059RS67;A0A059RRV4;A0A059RRM4;A0A059RPT3;A0A059RRE2;A0A343LFA7;A0A059RR10;A0A059RQE9;A0A059RQ94;A0A059RQ93;A0A023R622;A0A023R2S6;A0A059QIM5;A0A343HXG6;A0A059RSU6;X5CFF7;A0A059RTR3;A0A0N9PUR1;A0A343JIY6;A0A343JIX3;A0A343JIW0;A0A059QJC1;A0A059QN78;A0A140DIT1;A0A343HWY6;A0A343GQD0;A0A343ERW1;A0A343E9F5;A0A1B0VZL8;A0A343E938;A0A120HE94;A0A059QL46;A0A059QK18;A0A059QP01;A0A059QKF2;A0A059QS00;A0A059QPZ6;A0A059QPN2;A0A059QPH6;A0A059QPE0;A0A059QLE7;A0A059RSC4;A0A059QLE4;A0A059QNR9;A0A059QN76;A0A059QMG1;A0A059QLY3;A0A059QLM0;I7GW38;A0A059QNZ6;P03897 ND3;NADH3;MT-ND3 NADH-ubiquinone oxidoreductase chain 3 yes no 0 0 0 5 0 1 52.059 52.133 2 2.0373E-05 14665 20230619_1885_Aki_TMTPro18x_K_F5 112.13 4.8854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25871 3 24295 48514 39111 39111 1 9606 Homo sapiens -0.11561637207455533 STPYKPIDDR Unmodified 1190.5932 0.5931519 1638 A0A6Q8PGU6;Q8NB90-2;Q8NB90;Q8NB90-3 SPATA5 Spermatogenesis-associated protein 5 yes no 0 0 1 6 0 1 38.577 38.659 3 0.0017051 8976 20230619_1886_Aki_TMTPro18x_K_F6 98.754 67.683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25872 1638 24296 48515 39112 39112 1 9606 Homo sapiens 0.0054790529247839 STPYTAVR Unmodified 893.46068 0.46068117 3238 Q5T094;Q9P0H9;O15258;Q5T092;A0A0A0MR06;Q5T091;Q6IBJ7;Q5T093 RER1 Protein RER1 yes no 0 0 0 7.5 0.5 1 1 35.321 35.351 2 0.034597 7466 20230619_1887_Aki_TMTPro18x_K_F7 75.972 50.674 46504 29306 44694 56425 70146 64134 57254 66069 93297 55281 65171 68674 69893 61017 60494 68359 89439 74709 42925 27069 45989 54795 70471 64295 59566 67052 91770 56932 68398 68869 70798 63574 63310 68912 85193 70946 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22414000 25873 3238 24297 48516;48517 39113 39113 1 9606 Homo sapiens 0.009689253463420755 STQAPLIIRPDSGNPLDTVLK Unmodified 2234.227 0.22704641 426 P43490;A0A024R718;A0A7P0T9I9;A0A7P0T895;A0A7P0T8L3;A0A7P0T973;A0A7P0TAS5;A0A7P0T931;A0A7P0T862;A0A7P0T8D2;A0A0C4DFS8;B7Z8W6 NAMPT;PBEF1 Nicotinamide phosphoribosyltransferase yes no 0 0 1 2 0 1 61.143 61.154 3 2.1406E-12 19069 20230619_1881_Aki_TMTPro18x_K_F2 143.91 107.32 87332 62493 77246 95064 74145 128370 76848 80723 109700 117910 123690 159990 151470 135610 139020 148330 162040 189690 80613 57501 79415 93645 77800 126030 78384 86770 110530 118490 127720 159550 153190 141370 142910 151130 155010 179620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183870000 25874 426 24298 48518 39114 39114 1 9606 Homo sapiens 0.15930196695217091 STQDEINQAR Unmodified 1160.5422 0.54217896 449 A5PKY0;A0A024R7G6;M0R165;A8K5P4;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2;B4DQX5;B4DME4 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 1.5 0.5 1 1 32.155 32.185 2 0.00020817 6561 20230619_1881_Aki_TMTPro18x_K_F2 137.46 109.06 12941 9202.1 18716 17165 22805 26345 16751 22464 19800 17471 25256 32406 19197 24277 24880 10746 28176 32348 12000 8490.9 18582 16788 23201 25833 17364 23067 20201 18376 25449 31891 20108 24582 25302 12274 26955 30480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38945000 25875 449 24299 48519;48520 39115 39115 1 9606 Homo sapiens -0.03167043752387144 STQESLTAGGTDLKR Unmodified 1562.79 0.79001381 808 Q53F69;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345;A0A087X0S7;Q562F1;B4DK79;Q9H822 LRRC41 Leucine-rich repeat-containing protein 41 yes no 0 0 1 6 0 1 40.398 40.49 3 7.2639E-14 9722 20230619_1886_Aki_TMTPro18x_K_F6 142.35 123.62 46429 45464 48734 44972 73310 67237 69356 62953 65745 57275 74964 63588 65333 46740 81963 52739 61766 50282 43002 41603 49656 45788 73953 66259 70025 64448 67504 58381 76025 63731 67678 49117 81772 52870 59213 47826 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25346000 25876 808 24300 48521 39116 39116 1 9606 Homo sapiens 0.03113040324751637 STQFEYAWCLVR Unmodified 1558.7238 0.7238485 4726 Q9Y3D6 FIS1 Mitochondrial fission 1 protein yes yes 0 0 0 2 0 1 61.779 61.789 2 3.7752E-09 19399 20230619_1881_Aki_TMTPro18x_K_F2 202.56 186.69 109050 88909 111010 124320 92801 106050 132070 123230 127880 114930 119390 126420 129160 125000 147150 133840 128250 154150 100850 81682 112430 122380 98858 108980 130750 124560 130130 116950 123450 127780 132450 129420 148210 135540 123070 146110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141500000 25877 4726 24301 48522 39117 39117 1 9606 Homo sapiens -0.03316447051020077 STQNSFR Unmodified 838.39333 0.39332988 635 A0A024RAV2;P46063 RECQL ATP-dependent DNA helicase Q1 yes no 0 0 0 6 0.816 1 1 1 29.338 29.409 2 0.061146 5607 20230619_1886_Aki_TMTPro18x_K_F6 81.191 55.082 18561 8903.9 21381 23135 35812 34097 24452 32712 28413 12788 19077 18840 12434 17551 26604 8621.1 23420 20511 17140 8281.4 21703 22307 35706 33591 25450 32951 28300 14197 19748 18811 13626 17658 26525 9533.3 22419 19366 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 10475000 25878 635 24302 48523;48524;48525 39118 39118 1 9606 Homo sapiens -0.032331048646142335 STQQDIYAGSVQPILR Unmodified 1774.9214 0.92136233 375 Q14807;A0A8I5QJF2;A0A8I5KQ45;A0A8I5KRF7;A0A024R632;B7Z9T5;A0A8I5KW08;A0A8I5QL17;A0A8I5KTF7;A0A8I5QKY3;A0A8I5QJC5;A0A8I5KXF9;A0A8I5KSP6;A0A8I5KXF2;H3BRB3;Q14807-2;H3BTH5 KIF22 Kinesin-like protein KIF22;Kinesin-like protein yes no 0 0 0 7 0 1 52.248 52.322 2 4.8879E-09 14620 20230619_1887_Aki_TMTPro18x_K_F7 160.69 135.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25879 375 24303 48526 39119 39119 1 9606 Homo sapiens 0.06489850692628352 STQSLSLQR Unmodified 1018.5407 0.5407224 829 A0A087WW59;Q7Z7L8 C11orf96 Uncharacterized protein C11orf96 yes no 0 0 0 7.5 0.5 1 1 37.822 37.807 2 3.2283E-08 8595 20230619_1888_Aki_TMTPro18x_K_F8 205.91 127.73 97082 64615 67726 86660 92917 155160 95586 89625 157190 34772 39597 36537 28512 27741 103100 33504 50640 29169 89440 59386 71806 86485 95217 150000 97969 94624 151530 38457 45787 36772 33041 29183 100240 33563 48811 27829 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80425000 25880 829 24304 48527;48528 39120;39121 39121 2 9606 Homo sapiens 0.032193669495200083 STSAPQMSPGSSDNQSSSPQPAQQK Oxidation (M) 2547.1143 0.11433743 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;Q14157-1;Q14157-4;B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like no no 0 1 0 5 0 1 35.577 35.667 4 0.056659 7812 20230619_1885_Aki_TMTPro18x_K_F5 44.258 36.812 3446 2133.6 3050 4000 4852.2 5298.1 4544.6 4249.5 5274.5 4502.3 4396.1 5782 6481.1 6382.7 5949.2 3792.1 4433.3 6337.3 3178.5 1970.1 3164.6 3897.4 4890.3 5231.6 4619.4 4421.6 5299.1 4580.2 4654.1 5822.8 6526.6 6426.7 5963.4 4003.4 4269.6 5985.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17287000 25881 3877;3878 24305 48529 39122 39122 2543 1 9606 Homo sapiens -0.09733516621645322 STSGEGFQFGK Unmodified 1143.5197 0.51965261 3613 P49792;A0A8V8TLN4;A0A8V8TMN6;A6NKT7;J3KNE0;Q7Z3J3;A0A8Q3SIN4;B4DYH0;F8VYC4;A0A286YES2;Q99666;O14715;P0DJD1;P0DJD0;A0A8Q3SII4;A0A8Q3SII5;J3KQ37;V9HWE4;B4DTT2;B4E0M7;B4DZH4 RANBP2;RGPD3;RGPD4;RGPD1;RGPD5;RGPD8;RGPD2;HEL161 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 1 yes no 0 0 0 7 0 1 48.648 48.735 2 5.4025E-05 13015 20230619_1887_Aki_TMTPro18x_K_F7 141.91 109.69 101180 86173 99662 127720 114890 119160 130150 123410 129290 143900 144470 131080 156550 127150 117180 155470 152160 139710 93571 79210 101770 125380 118450 121230 130310 126370 132460 143910 147920 133590 157500 132810 121990 154790 145160 132910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55547000 25882 3613 24306 48530 39123 39123 1 9606 Homo sapiens -0.046366431500018734 STSLETQDDDNIR Unmodified 1492.6641 0.66414459 4108 Q6IA86-4;Q6IA86-7;Q6IA86-2;Q6IA86-3;Q6IA86-5;Q6IA86;Q6IA86-6 ELP2 Elongator complex protein 2 yes no 0 0 0 1 0 1 38.784 38.784 3 3.4266E-08 9529 20230619_1880_Aki_TMTPro18x_K_F1 119.43 106.87 29166 26420 32061 39570 45047 54185 37819 46552 58527 38959 41204 43554 37745 38911 46753 45837 60416 46091 27010 24283 32574 39037 45638 53472 39192 47849 57707 39966 42969 43861 39140 40623 48125 45972 57574 43828 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35174000 25883 4108 24307 48531 39124 39124 1 9606 Homo sapiens -0.06248091251336518 STSQGSINSPVYSR Unmodified 1481.711 0.71103521 1395 B3KSG3;F8W8M4;A0A2Z4N5U1;A0A3B3IS55;O14639-4;O14639-3;O14639-5;O14639-2;O14639-6;O14639;B4DQA3;B7Z4H1;H0Y7N6;F6XFR5;A0A494C1P1;A0A494C1G0 ABLIM1 Actin-binding LIM protein 1 yes no 0 0 0 8 0 1 37.97 37.956 3 1.0401E-23 8666 20230619_1888_Aki_TMTPro18x_K_F8 195.87 170.25 19014 13497 22663 24589 26116 25510 24821 24178 25534 31264 36820 38088 39369 29914 30049 40451 40513 37806 17595 12449 22778 23913 26778 25689 25137 24990 26446 31409 37355 38088 39636 31689 31353 40301 38643 35947 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24535000 25884 1395 24308 48532 39125 39125 1 9606 Homo sapiens -0.010551869095252187 STSQTFIYK Unmodified 1073.5393 0.53932542 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5QJR3;A0A8I5KV76;A0A8I5KSH0;A0A8I5KVZ4;R4GMP9;A0A8I5KSI8 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 0 1.5 0.5 1 1 47.938 47.973 3 0.00039093 13481 20230619_1881_Aki_TMTPro18x_K_F2 116.3 87.561 87691 68806 84196 95954 89005 91240 90401 84457 103400 80933 90291 74983 88791 64162 100150 83672 97708 75183 81038 63221 85949 94573 92071 92468 91469 86708 104010 81849 93123 76100 91134 67621 101410 83353 93354 71582 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177540000 25885 1785 24309 48533;48534 39126 39126 1 9606 Homo sapiens 0.005497328607589225 STSQVAASLLASK Unmodified 1261.6878 0.68778057 4624 Q9NXV6;B3KTW3 CDKN2AIP CDKN2A-interacting protein yes no 0 0 0 3 0 1 55.605 55.646 3 0.0048863 16620 20230619_1882_Aki_TMTPro18x_K_F3 75.764 55.977 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25886 4624 24310 48535 39127 39127 1 9606 Homo sapiens 0.06740419043808288 STSTPTSPGPR Unmodified 1086.5306 0.53055165 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;A0A024QZ91;A0A024QZC0;A0A0C4DGL7;H3BRB0 ATXN2L Ataxin-2-like protein yes no 0 0 0 5.5 0.5 1 1 29.721 29.773 2 0.00039962 5676 20230619_1886_Aki_TMTPro18x_K_F6 118.71 99.981 9582.6 6705.2 11960 15552 14107 19938 12026 18179 15690 11051 18391 24980 18364 18301 22842 8124.9 22593 24688 8871 6210.1 12010 15012 14462 19754 12380 18492 15860 11975 18796 24463 18971 18563 23050 9305 21633 23266 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30787000 25887 4285 24311 48536;48537 39128 39128 1 9606 Homo sapiens -0.009252407757003311 STTLFSR Unmodified 810.42357 0.42356738 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 2 0 1 41.986 42.066 2 0.0070326 10793 20230619_1881_Aki_TMTPro18x_K_F2 128.37 103.55 2705000 2235800 2468800 2375200 2364000 2542700 2519800 2452600 2951800 1491100 1639600 1185900 1274900 1018400 2063900 1544700 1704500 1101900 2499600 2048300 2525100 2391100 2468600 2557400 2544700 2486600 2925100 1551800 1726600 1215200 1350300 1083700 2061900 1520900 1630100 1053500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 711030000 25888 161 24312 48538 39129;39130;39131 39131 3 9606 Homo sapiens 0.010772538005653587 STTPEELYQR Unmodified 1222.583 0.58298115 1914 A2RRP1-2;A2RRP1;A0A8V8TPT1;A0A8V8TQK6;G1UI26 NBAS Neuroblastoma-amplified sequence yes no 0 0 0 3 0 1 40.91 40.969 2 1.2377E-06 10005 20230619_1882_Aki_TMTPro18x_K_F3 134.66 115.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25889 1914 24313 48539 39132 39132 1 9606 Homo sapiens -0.019407024327847466 STTPTSSPFR Unmodified 1079.5247 0.52473799 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;H7C5N8;A0A2R8YET2;A0A2R8Y7F4;A0A2R8Y424 PRRC2C Protein PRRC2C yes no 0 0 0 8 0 1 38.296 38.282 2 0.007013 8789 20230619_1888_Aki_TMTPro18x_K_F8 84.615 56.441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25890 2894 24314 48540 39133 39133 1 9606 Homo sapiens -0.011843392873743142 STTSTIESFAAQEK Unmodified 1498.7151 0.71511753 3127 Q86Y74;J3KPP4;O95232;Q6PKC2;A8K3C5;B4DJ96 CROP;LUC7L3 Luc7-like protein 3 yes no 0 0 0 4.67 0.471 1 2 52.855 52.902 2;3 4.8761E-27 15025 20230619_1885_Aki_TMTPro18x_K_F5 218.18 184.3 94771 86706 85451 92143 85121 99829 98356 99135 91788 111090 110910 112070 137150 105980 114880 130060 129990 139540 87625 79408 87625 92751 88830 100370 98239 101640 94762 111620 114060 113550 138010 110870 118130 130790 124290 132400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 788190000 25891 3127 24315 48541;48542;48543 39134;39135 39135 2 9606 Homo sapiens -0.014291422064388826 STTTGHLIYK Unmodified 1119.5924 0.59242362 1560;3997;1378 Q05639;A0A2U3TZH3;A0A2R8Y488;A0A2R8Y660;A0A2R8YDN5;Q6NSH7;A0A4D5RAE1;A0A4D5RA53;A0A4D5RA40;A0A4D5RA74;A0A4D5RAA6;A0A4D5RAC3;A0A4D5RAB4;A0A4D5RAB0;A0A6Q8PFK6;Q6NS35;A0A4D5RA70;P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q9H2I7;A0A4D5RA52;A0A087WV01;A0A4D5RA61;A0A4D5RAB8;A0A4D5RBK4;A0A4D5RAF1;A0A4D5RBI9;A0A4D5RBD4;A0A4D5RBH1;A0A4D5RA69;A6PW80;A0A4D5RBL9;Q5JR01;A0A4D5RAA9;Q53GE9 EEF1A2;EEF1A1;EEF1A1P5 Elongation factor 1-alpha 2;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 4.14 2.23 1 1 1 1 1 1 1 40.066 40.115 3 6.0599E-05 9807 20230619_1881_Aki_TMTPro18x_K_F2 117.02 51.675 1583500 1293500 1704900 1850100 1912500 2053900 1778000 1765200 1389600 1995500 2042600 2285800 2028700 1484900 1617900 2203600 2167400 2363400 1465100 1188600 1725600 1824400 1964500 2054500 1789900 1829900 1466800 2011200 2065800 2279300 2050000 1597200 1686100 2209700 2069800 2242300 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7489299999.999999 25892 1378;1560;3997 24316 48544;48545;48546;48547;48548;48549;48550 39136;39137;39138;39139;39140;39141 39137 6 9606 Homo sapiens 0.03741110643431966 STVAESVSQQILR Unmodified 1416.7573 0.75725712 158 A0A024R1T1;Q86WX3 RPS19BP1 Active regulator of SIRT1 yes no 0 0 0 8 0 1 52.721 52.796 2 2.3763E-10 14775 20230619_1888_Aki_TMTPro18x_K_F8 214.67 130.62 58980 52592 49544 62677 56940 69748 64933 60577 76008 65890 66129 66238 72724 63227 65672 72267 69597 72744 54496 48220 51319 62542 58862 69772 65321 62682 76395 66356 68605 67134 73693 65796 67157 72490 66574 69076 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88290000 25893 158 24317 48551 39142 39142 1 9606 Homo sapiens 0.06554877992562069 STVALTAAR Unmodified 888.50288 0.50288033 4491;3802 Q05CW7;Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 no no 0 0 0 4.5 3.5 1 1 37.699 37.692 2 0.00040298 8567 20230619_1888_Aki_TMTPro18x_K_F8 137.06 87.494 139140 103350 121980 135190 219560 250630 170100 186860 274800 55301 71030 67357 61508 59348 94905 60745 85194 61230 128450 94912 126900 135320 219330 243100 177410 191660 265200 63803 82067 67703 64821 61513 95180 61172 81441 58239 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71649000 25894 3802;4491 24318 48552;48553 39143;39144 39144 2 9606 Homo sapiens 0.05416900754698872 STVAQLVK Unmodified 844.50182 0.5018177 3504 V9HW26;P25705;P25705-2;P25705-3;K7ENJ4 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 1.5 0.5 2 2 47.698 47.733 2;3 0.00092046 13358 20230619_1881_Aki_TMTPro18x_K_F2 169.06 82.589 543600 500310 499010 478300 750320 748120 715790 667670 851880 275250 285790 198030 227980 162300 473960 221240 226470 174760 502700 457790 514290 488760 758160 734540 727130 677010 835730 297980 317280 203940 246030 171860 462550 219610 218710 166670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2230800000 25895 3504 24319 48554;48555;48556;48557 39145;39146 39146 2 9606 Homo sapiens 0.07334686385797795 STVEGIQASVK Unmodified 1117.5979 0.59790293 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9 VCL;HEL114 Vinculin yes no 0 0 0 6.5 0.5 1 1 46.13 46.215 2 4.9679E-17 11826 20230619_1887_Aki_TMTPro18x_K_F7 219.03 153.78 36335 23963 29147 38298 49163 51335 55245 50434 66844 41879 39180 43500 49640 39421 41118 51220 48329 46772 33502 22071 30577 37636 49649 50878 55633 51355 66277 42885 41987 43962 49930 41428 42414 51004 46160 44477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32755000 25896 51 24320 48558;48559 39147;39148 39148 2 9606 Homo sapiens 0.04380789435231236 STVHEILCK Acetyl (Protein N-term) 1127.5645 0.56449431 368 P07355;A0A024R5Z7;V9HW65;H0YN42;H0YMD0;A6NMY6;H0YMU9;B4DNH8;H0YNB8;H0YKS4;H0YNP5;A0A7I2V4P4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YMD9;H0YKN4 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 1 0 0 5.67 1.7 1 1 1 47.876 47.934 2 6.8888E-06 13015 20230619_1883_Aki_TMTPro18x_K_F4 72.547 45.427 1048400 831220 928770 977290 1068800 1276900 1009700 1038700 872440 1168400 1185200 1320000 1172600 1031500 1003800 1149200 1325300 1514000 968280 762360 955850 978830 1098100 1262900 1017900 1080900 910610 1177800 1201700 1322500 1189600 1080200 1042300 1172800 1266300 1433400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3410999999.9999995 25897 368 24321 48560;48561;48562 39149;39150;39151 39149 3 9606 Homo sapiens 0.005814643916892237 STVLTPMFVETQASQGTLQTR Unmodified 2294.1576 0.15764621 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2 0 2 60.771 60.782 3 4.0001E-67 18949 20230619_1881_Aki_TMTPro18x_K_F2 308.52 298.72 84379 68788 80444 86613 66981 94409 93036 90150 103700 86518 87307 89932 100750 83375 85764 96207 101710 106210 77991 63126 81915 86105 71510 94716 92619 92312 104330 87775 90953 90933 101700 86930 88411 97001 97194 100750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 303930000 25898 3758 24322 48563;48564 39152;39153;39154 39154 3 9606 Homo sapiens 0.062333696841506026 STVLTPMFVETQASQGTLQTR Oxidation (M) 2310.1526 0.15256084 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 8 0 1 56.579 56.636 3 3.1149E-08 16280 20230619_1888_Aki_TMTPro18x_K_F8 109.22 99.433 45080 34909 41055 42125 41610 52596 43471 43087 57155 40928 38940 36948 39290 27713 38467 39299 39815 30754 41640 32028 42060 42084 43314 52156 44140 44615 56685 41395 40813 37384 40020 29520 39206 38830 38019 29334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215500000 25899 3758 24322 48565 39155 39155 2446 1 9606 Homo sapiens 0.04989065821564509 STVNCSTTPVAER Unmodified 1420.6616 0.66164217 1845 Q99567;J3KMX1;A0A8V8TPS0;A0A8V8TPT0;A0A8V8TQB1;A0A8V8TQZ0;A0A8V8TQC3;A0A8V8TQC2;A0A8V8TRA5;A0A8V8TPT4;A0A8V8TQA5;B4DP20;A0A8V8TQD5;B7Z5I6;A0A8V8TQZ7;A0A8V8TQC7;A0A8V8TPS5;A0A8V8TQB7;A0A8V8TQD1;A0A8V8TR00;I3L245 NUP88 Nuclear pore complex protein Nup88 yes no 0 0 0 4 0 1 34.242 34.293 2 2.0479E-27 7248 20230619_1883_Aki_TMTPro18x_K_F4 247.13 208.38 36189 23495 32272 39787 44734 46770 43289 42246 56583 44391 49336 49345 56932 45176 48613 39357 59298 49754 33390 21658 33342 38895 45451 46642 44121 43532 56574 44934 51285 49707 57456 46461 50108 40264 56567 47181 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53434000 25900 1845 24323 48566 39156 39156 1 9606 Homo sapiens -0.03186218190035106 STVPTDFSSAK Unmodified 1138.5506 0.55061839 969 A0A2R8Y484;A0A0A1TSG4;Q08722-2;Q08722-3;Q08722-4;Q08722 CD47 Leukocyte surface antigen CD47 yes no 0 0 0 6.5 0.5 1 1 46.605 46.691 2 1.0442E-06 12450 20230619_1886_Aki_TMTPro18x_K_F6 167.67 122.59 156540 139110 172310 171020 176280 195640 188470 183820 224920 177930 214180 208600 220630 171360 169310 228750 217810 205290 144950 127580 173780 170430 183120 195690 190470 188480 226450 181150 220430 209260 222470 181030 176080 227470 207850 195280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 178280000 25901 969 24324 48567;48568 39157;39158 39157 2 9606 Homo sapiens -0.013114898357571292 STVSLDPK Unmodified 845.44945 0.44944778 2249 Q6IAP9;Q5T1M7;B2R7V4;Q59EL4;O43172-2;O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes no 0 0 0 5 0.816 1 1 1 44.04 44.111 2 0.00010866 11282 20230619_1886_Aki_TMTPro18x_K_F6 179.21 98.091 133150 88106 125890 134830 157580 170630 148850 151010 192360 152650 166910 187660 172700 161490 166030 139890 218790 194710 122920 81102 129010 132720 161000 169310 151910 155660 192390 155350 172850 187880 175930 166310 171690 144100 208660 184440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183340000 25902 2249 24325 48569;48570;48571 39159 39159 1 9606 Homo sapiens 0.020541032521919078 STVTLSWKPVQK Unmodified 1372.7715 0.77145062 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;Q9BZZ5-5;Q9BZZ5-6;B4DDR3;H0YER7 API5 Apoptosis inhibitor 5 yes no 0 0 1 5.5 0.5 2 2 51.787 51.862 3;4 1.1275E-07 14547 20230619_1885_Aki_TMTPro18x_K_F5 168.3 138.76 284620 237900 245300 268090 267440 277340 286580 281490 294270 319920 306530 292710 323010 256920 297890 314810 317330 288580 262920 218060 252910 268470 276470 279980 288110 288320 300060 320350 314580 297190 327820 269340 304510 313940 303240 274480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 613170000 25903 4478 24326 48572;48573;48574;48575 39160;39161 39160 2 9606 Homo sapiens 0.09997575211514231 STVVPVPYEK Unmodified 1117.6019 0.60192568 2144;1327 A0A1W6S962;X5D7Q9;P78347-5;A0A0A0VEB4;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52 GTF2I;GTF2I-RARA General transcription factor II-I no no 0 0 0 8 0 1 50.726 50.802 3 0.00042076 13838 20230619_1888_Aki_TMTPro18x_K_F8 93.058 63.585 166660 133470 149270 155550 154870 196410 158010 164750 183460 176320 187100 193170 205810 174810 202250 212760 203930 206190 153950 122400 153220 155820 160790 194740 159990 170780 185630 178130 192690 194760 209280 182920 205870 212810 195120 195910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 208060000 25904 1327;2144 24327 48576 39162;39163 39163 2 9606 Homo sapiens 0.04782878928926948 STWLILHHK Unmodified 1133.6346 0.63456321 1420 Q59F44;A0A384ME44;P00167-2;P00167;P00167-3 CYB5A Cytochrome b5 yes no 0 0 0 4.5 0.5 1 1 44.756 44.817 4 0.0032344 11630 20230619_1883_Aki_TMTPro18x_K_F4 89.355 54.255 37911 39019 41241 43978 35946 42897 38933 37631 44202 34789 31588 30626 37316 31376 39078 35405 39255 28771 35138 35741 41553 43998 37858 43345 39255 38752 44219 35213 33263 31314 37992 32549 39690 35164 37484 27436 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53756000 25905 1420 24328 48577;48578 39164 39164 1 9606 Homo sapiens 0.07309130842440936 STYCATMVQHCEALNR Oxidation (M) 1955.8288 0.82880063 4663 Q9UHW5;Q9UHW5-2 GPN3 GPN-loop GTPase 3 yes no 0 1 0 6 0 1 36.823 36.892 3 5.4805E-05 8298 20230619_1886_Aki_TMTPro18x_K_F6 103.14 99.035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25906 4663 24329 48579 39165 39165 2848 1 9606 Homo sapiens -0.1108806169897889 STYCATMVQHCEALNR Unmodified 1939.8339 0.83388601 4663 Q9UHW5;Q9UHW5-2 GPN3 GPN-loop GTPase 3 yes no 0 0 0 7.5 0.5 1 1 41.224 41.259 3 9.129099999999999E-21 9785 20230619_1887_Aki_TMTPro18x_K_F7 176.29 168.12 21845 17661 25294 24072 23381 28497 24753 27257 32054 28250 31036 32221 32252 23881 23501 36996 37718 38031 20225 16221 25373 23842 24497 28439 25119 27950 32190 28619 31937 32263 32456 25618 24911 36977 35953 36110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53760000 25907 4663 24329 48580;48581 39166 39166 1 9606 Homo sapiens -0.0984375783637006 STYEQVDLIGK Unmodified 1251.6347 0.63468237 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 5 0.816 1 1 1 53.312 53.369 3 1.774E-06 15203 20230619_1885_Aki_TMTPro18x_K_F5 131.83 109.8 241050 214210 204490 247170 184790 236350 269570 233590 277910 307070 264590 294710 355010 269560 244990 364870 320150 354280 222730 196350 210820 246770 196060 239740 267030 240930 282390 305990 276170 298860 354080 284090 255870 364140 305830 336490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 564930000 25908 1748 24330 48582;48583;48584 39167;39168 39168 2 9606 Homo sapiens 0.018930412611325664 STYEQVDLIGKK Unmodified 1379.7296 0.72964538 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 1 7 0.816 1 1 1 49.719 49.797 3 2.493E-05 13409 20230619_1888_Aki_TMTPro18x_K_F8 122.55 101.59 352840 301180 295990 288560 272610 267080 327890 333410 315430 430530 350390 303020 449630 308660 357020 454930 357540 297650 325920 275660 304960 292540 286270 273560 327160 338490 324190 425740 361860 313830 450790 326160 365220 445760 341680 284600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 840130000 25909 1748 24331 48585;48586;48587 39169 39169 1 9606 Homo sapiens 0.05496974732295712 STYPPSGPTYR Unmodified 1224.5775 0.57750184 1261 A0A1B0GV88;A0A1B0GUG1;Q53H01;A8K0B6;A0A1B0GUH5;A0A1B0GTZ5;A0A1B0GTM3;A0A1B0GUA4;A0A1B0GW68;A0A1B0GV95;E7EMM4;A0A1B0GVG2;A0A1B0GTP7;A0A1B0GUB3;A0A1B0GU06;A0A1B0GVC9;A0A1B0GU62;A0A1B0GVJ1;A0A1B0GW48;D3DSQ1;Q13510;Q13510-2 ASAH1 Acid ceramidase;Acid ceramidase subunit alpha;Acid ceramidase subunit beta yes no 0 0 0 8 0 1 37.538 37.524 2 0.0021421 8479 20230619_1888_Aki_TMTPro18x_K_F8 94.692 64.122 4938.1 2872.5 3627.9 7932.5 9059.3 12343 8931.4 8744.4 15193 6591.1 8838.3 11576 7104.5 7987 9855.5 7627.6 9681 10929 4547.9 2672.2 3908.2 7630 9010.6 12045 9188.9 9126.1 14835 6948.4 9312.8 11394 7453.8 8329.6 9951.8 7863.4 9273.1 10341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3779900 25910 1261 24332 48588 39170 39170 1 9606 Homo sapiens -0.02580381224561279 STYTSYPK Unmodified 945.44436 0.4443624 1103 O14964;A0A7I2V3F9;A0A7I2V5A3;A0A7I2V3Z1;A0A7I2V6E0;A0A7I2V2K2;A0A7I2V5A2;A0A7I2V3I8;A0A7I2V2D8;A0A7I2V2W5;A0A7I2V2R9;A0A7I2V3J3;A0A0S2Z4R4;A0A7I2V637;B4E1E2;O14964-2;A0A7I2YQD1;A0A7I2V307;I3L1P5;I3L1E3;A0A7I2YQP0;A0A7I2V3Q7;A0A7I2YQS8;A0A7I2YQY0;A0A7I2V4M9;A0A7I2V3C3 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 8 0 1 41.15 41.143 2 0.0014378 9949 20230619_1888_Aki_TMTPro18x_K_F8 142.64 88.111 38412 26042 40243 51078 53086 60300 50949 54651 62560 52576 55725 49962 50541 44526 52583 55055 66234 52081 35494 24053 40992 49581 54090 60093 51850 56152 62777 53189 57235 50687 51877 46658 54195 54986 63142 49550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34813000 25911 1103 24333 48589 39171 39171 1 9606 Homo sapiens -0.030542006104269603 STYVTEVR Unmodified 953.48181 0.48181054 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7;B3KWP6;B7Z6P3;H0YJP2;B3KP76 KTN1 Kinectin yes no 0 0 0 4.5 0.5 1 1 37.903 37.97 2 0.0044646 8688 20230619_1883_Aki_TMTPro18x_K_F4 128.61 72.061 198830 145630 193780 199390 246380 225490 212050 247630 256750 209190 287280 263530 261660 232980 257340 239480 321920 264830 183690 133820 198020 197300 250540 226600 217320 250310 260020 215160 292030 264200 267780 241620 265190 242060 306990 251470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204700000 25912 380 24334 48590;48591 39172 39172 1 9606 Homo sapiens 0.0032089065518903226 SVAADFIQQGIR Unmodified 1303.6884 0.68844927 4445 Q9BUT1;D6R9P2;Q9BUT1-3 BDH2;SLC9B2 3-hydroxybutyrate dehydrogenase type 2 yes no 0 0 0 4.5 3.5 1 1 55.212 55.246 2 4.5067E-12 16521 20230619_1880_Aki_TMTPro18x_K_F1 201.61 150.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25913 4445 24335 48592;48593 39173;39174 39173 2 9606 Homo sapiens 0.048752584835028756 SVADGQESTPPTPAPTSGIVGALMEVMQK Unmodified 2897.4151 0.41505947 1930 A4D0Y1;A8K180;O00401 WASL Neural Wiskott-Aldrich syndrome protein yes no 0 0 0 8 0 1 66.26 66.279 3 6.877E-06 20465 20230619_1888_Aki_TMTPro18x_K_F8 83.788 75.795 4509.8 3411.2 3530 3529.7 3935.2 4582.4 4306.8 5350.1 4311.4 6522.2 5071.7 6381.1 5264.4 4978 4927.8 7794.4 5924.8 5293.1 4160.6 3125.6 3673.9 3572.1 4069.1 4572 4324.5 5437.6 4435.1 6517.1 5185.8 6433.7 5355.5 5323.4 5087.9 7639.2 5654.8 5056.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13501000 25914 1930 24336 48594 39175 39175 1 9606 Homo sapiens 0.042248539845331834 SVAEHPLSR Unmodified 994.51959 0.51959303 3274 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 yes yes 0 0 0 5 0 1 30.398 30.474 3 0.00044843 5861 20230619_1885_Aki_TMTPro18x_K_F5 114.4 79.133 19680 15112 22302 25826 22794 23428 25613 25194 22954 21779 27551 27686 26007 22188 24665 21835 27814 26168 18211 13922 22466 25153 23678 23902 25589 25538 23706 22365 27988 27650 26527 23052 25261 22203 26571 24815 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11819000 25915 3274 24337 48595 39176 39176 1 9606 Homo sapiens 0.02211401640670374 SVAFPPFPSGR Unmodified 1160.5978 0.59784335 55 Q9P0M6;A0A024QZP6;A0A7I2V423;A0A7I2V412;A0A7I2YQF0 H2AFY2 Core histone macro-H2A.2;Core histone macro-H2A yes no 0 0 0 4 0 1 54.986 54.998 2 0.00057774 16166 20230619_1883_Aki_TMTPro18x_K_F4 114.39 94.607 66699 58992 67220 79525 66997 87563 85656 79200 93343 71900 70442 72356 82114 61066 82306 80631 73054 84739 61710 54159 68343 78694 70207 87688 85484 81325 93688 73113 73903 73071 83382 64450 83174 80945 70068 80400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57717000 25916 55 24338 48596 39177 39177 1 9606 Homo sapiens 0.023968342258967823 SVALYDCR Unmodified 982.45422 0.45421558 674 B4DNL1;Q9BV37;Q53FW9;A0A024RBH5;Q13610;B4DJV5 PWP1 Periodic tryptophan protein 1 homolog yes no 0 0 0 5.67 0.471 1 2 41.895 41.986 2 1.8135E-05 10331 20230619_1885_Aki_TMTPro18x_K_F5 139.88 116.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25917 674 24339 48597;48598;48599 39178;39179;39180 39178 3 9606 Homo sapiens -0.03771335876695048 SVAQQASLTEQR Unmodified 1316.6684 0.66844211 2366 B3KNU0;P52306-4;P52306;P52306-5;B7Z4M5;P52306-6;P52306-2;P52306-3;B7Z2V8;Q6U7G8 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes no 0 0 0 4.5 0.5 1 1 37.336 37.404 2 7.992799999999999E-32 8483 20230619_1883_Aki_TMTPro18x_K_F4 288.11 254.56 103720 81744 89692 100660 129700 138180 108480 108490 139360 107780 140080 147260 120490 113630 123610 133390 154540 142270 95778 75008 92934 100550 131030 136210 111550 112880 140120 110240 142880 146580 123850 119290 127390 134210 147480 135080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157730000 25918 2366 24340 48600;48601 39181;39182 39181 2 9606 Homo sapiens 0.02277462752908832 SVASGGWQEPENPHTQR Unmodified 1878.8609 0.86088734 1123 A0A0S2Z5B8;A0A0S2Z5D4;Q9UJW0;Q9UJW0-3;Q9UJW0-2;E5RGG1;H9KVE0 DCTN4 Dynactin subunit 4 yes no 0 0 0 3 0 1 37.421 37.474 3 0.0019409 8561 20230619_1882_Aki_TMTPro18x_K_F3 69.935 58.142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25919 1123 24341 48602 39183 39183 1 9606 Homo sapiens -0.04338866637726824 SVCLIGDK Unmodified 890.45315 0.45315295 2629 B7ZAX9;B4DZC0;O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 6.5 0.5 1 1 48.816 48.898 3 0.041999 13088 20230619_1887_Aki_TMTPro18x_K_F7 50.805 29.277 155880 114820 128110 143970 173780 169150 169950 169250 202990 163460 175590 153850 194030 132400 145370 187030 199640 170040 143830 105410 133210 143330 176720 169180 172540 172710 203760 165290 182040 156060 194980 140310 151890 185990 190280 161790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174520000 25920 2629 24342 48603;48604 39184 39184 1 9606 Homo sapiens 0.003544497544112346 SVCTEAGMFAIR Oxidation (M) 1356.6166 0.61660624 1235 C9JX88;A0A140VK70;P35998;Q75L23;P35998-2 PSMC2 26S protease regulatory subunit 7 yes no 0 1 0 7 0 1 48.527 48.614 2 0.00053756 12972 20230619_1887_Aki_TMTPro18x_K_F7 98.009 84.555 73211 66942 61733 70388 74860 71019 74027 70765 80017 77128 68110 79459 90363 65819 70498 84735 78525 76571 67658 61303 63899 70837 76633 71829 74860 72502 80769 77675 71487 80061 90508 69381 72555 84353 75041 72822 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67309000 25921 1235 24343 48605 39185 39185 777 1 9606 Homo sapiens -0.04743740256890305 SVCTEAGMFAIR Unmodified 1340.6217 0.62169161 1235 C9JX88;A0A140VK70;P35998;Q75L23;P35998-2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 7.5 0.5 1 1 53.387 53.458 2 1.4296E-05 15029 20230619_1888_Aki_TMTPro18x_K_F8 141.91 120.06 288960 234470 257410 282840 243720 348930 299770 307510 814040 352470 332030 345680 369030 318520 357080 389720 363540 378100 266940 215080 264170 282510 257580 346660 314310 318140 779360 354840 364840 350300 375190 333200 363860 389770 347870 359190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 126070000 25922 1235 24343 48606;48607 39186;39187 39187 2 9606 Homo sapiens -0.034994363942814743 SVDEALR Unmodified 788.40283 0.40283194 3538 V9HW12;P32119;B4DF70 HEL-S-2a;PRDX2 Peroxiredoxin-2 yes no 0 0 0 2 0.816 1 1 1 37.766 37.805 2 0.00072387 8783 20230619_1881_Aki_TMTPro18x_K_F2 180 94.693 1687700 1037200 1622100 1681900 1980100 1956600 1654000 1719100 2001600 1663100 2341400 2417100 1943300 1938200 2033200 1248600 2772600 2457700 1557700 955830 1658500 1648100 2018600 1951900 1698300 1771500 2031000 1707300 2369500 2401400 2002800 1978700 2102000 1336300 2643400 2322700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4570900000 25923 3538 24344 48608;48609;48610 39188;39189;39190 39189 3 9606 Homo sapiens 0.00016663420910845161 SVDETLR Unmodified 818.4134 0.41339662 1476;3838 A0A384NPQ2;Q06830;A0A0A0MSI0;B2R4P2;A0A0A0MRQ5;V9HW63;Q13162;H7C3T4 PRDX1;HEL-S-97n;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 no no 0 0 0 2 0.816 1 1 1 36.697 36.734 2 0.00076199 8348 20230619_1881_Aki_TMTPro18x_K_F2 179.23 81.097 1560500 882290 1614600 1666900 2245600 2354200 1778700 1982000 2241300 1552900 2167600 2476700 1454500 2367800 1288100 844990 2411300 2264500 1440600 815160 1645200 1626300 2269700 2318600 1835400 2038600 2251100 1622400 2197600 2465200 1508000 2361900 1372100 955360 2295200 2136300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7539999999.999999 25924 1476;3838 24345 48611;48612;48613 39191;39192 39192 2 9606 Homo sapiens -0.0030735392465430778 SVDETTQAMAFDGIIFQGQSLK Unmodified 2385.1522 0.15222649 2658 B5BU25;P26368-2;P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 0 0 0 6 0.816 1 1 1 64.009 64.05 3 1.5229E-17 19622 20230619_1887_Aki_TMTPro18x_K_F7 165.06 147.57 256200 160180 215990 244110 182640 249790 247430 229630 214340 287300 281050 294850 359170 273740 315690 288770 312850 343030 236250 147470 222500 239560 194440 251480 244780 237620 223260 287370 288800 298140 361730 284130 321470 293090 299570 325130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2200900000 25925 2658 24346 48614;48615;48616 39193 39193 1 9606 Homo sapiens 0.015056461016683897 SVDFHFR Unmodified 906.4348 0.43480077 4088 Q643R0;Q9ULW0;Q9ULW0-2;B3KM90 HCTP4;TPX2 Targeting protein for Xklp2 yes no 0 0 0 8 0 1 43.409 43.419 3 0.063153 10856 20230619_1888_Aki_TMTPro18x_K_F8 58.917 26.562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25926 4088 24347 48617 39194 39194 1 9606 Homo sapiens -0.022159241052804646 SVDGPIRLPIVDK Unmodified 1407.8086 0.80856441 3455 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 0 0 1 1.5 0.5 1 1 55.206 55.216 3 0.0020936 16513 20230619_1880_Aki_TMTPro18x_K_F1 78.191 50.862 148640 136480 144700 165770 153190 156730 147530 135520 156330 200460 172040 153230 177720 138240 174170 212860 176690 189910 137510 125150 147540 164860 158200 158770 149390 141710 159690 197620 175920 157260 180940 147120 177530 211280 169120 180580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 815840000 25927 3455 24348 48618;48619 39195 39195 1 9606 Homo sapiens 0.12097246757252833 SVDIPENR Unmodified 928.46141 0.46140945 1185 A0A140VJL6;Q2TAA2;H7C5G1;Q6NVV8;Q05D21;Q2TAA2-2;Q6PCA9;C9JDY4;C9J5J2;C9JE02 IAH1 Isoamyl acetate-hydrolyzing esterase 1 homolog yes no 0 0 0 2.5 0.5 1 1 38.045 38.103 2 0.019739 8919 20230619_1881_Aki_TMTPro18x_K_F2 95.605 46.818 138620 108070 126310 135620 165080 170220 138270 141690 188250 155530 197340 170150 180020 154760 165740 152430 209680 181270 128050 99189 129940 135120 167720 168880 142540 147070 189170 157000 201060 171620 183640 160060 171120 154890 200000 171970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151060000 25928 1185 24349 48620;48621 39196 39196 1 9606 Homo sapiens -0.005682800046088232 SVDNRPQAPLVSASAVNEEVSK Unmodified 2296.1659 0.16590271 477 A0A024R7X0;Q9Y6D6;B3KMS9;E5RHL7;Q59FY5;E5RIF2 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes no 0 0 1 5 0 1 48.189 48.266 3 2.4241E-07 13001 20230619_1885_Aki_TMTPro18x_K_F5 101.5 89.192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25929 477 24350 48622 39197 39197 1 9606 Homo sapiens 0.06966639925167328 SVDPDSPAEASGLR Unmodified 1399.6579 0.657937 2231 B2R6A3;O14745;B3KSV9;O14745-2 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF;Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes no 0 0 0 2.5 0.5 1 1 42.204 42.275 2 3.6579E-37 10834 20230619_1881_Aki_TMTPro18x_K_F2 288.11 257.92 96784 82077 87109 71257 49604 56619 107770 106570 114360 121460 116400 108840 150590 98696 93633 159840 147330 119950 89440 75069 88662 72847 56066 59577 105500 105780 116230 121500 120710 110850 149750 105460 99532 157200 140250 114460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165320000 25930 2231 24351 48623;48624 39198 39198 1 9606 Homo sapiens -0.025905646922183223 SVDPENNPTLVEVLEGVVR Unmodified 2065.0691 0.069148783 434 E9PFH4;B2R6H7;A0A024R794;Q9Y5L0-3;Q9Y5L0;B3KMX1;B3KM69;Q9Y5L0-5 TNPO3 Transportin-3 yes no 0 0 0 5 0 1 64.752 64.797 3 3.6899E-10 20102 20230619_1885_Aki_TMTPro18x_K_F5 123.19 111.93 11925 7598.5 10356 10874 8017.7 10014 8986.3 10451 12318 11906 11819 14491 14861 11931 12644 14085 11224 14497 11000 6990.1 10618 10700 8559.1 10196 9116.9 10685 12344 12033 12300 14498 14957 12507 12827 14139 10775 13753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24895000 25931 434 24352 48625 39199 39199 1 9606 Homo sapiens 0.07921697435995156 SVEAAAELSAK Unmodified 1074.5557 0.55570376 1256 A0A158RFU3;P20962;F5GXR3 PTMS Parathymosin yes no 0 0 0 4.62 1.32 2 2 2 1 1 48.009 48.079 2;3 6.072E-07 13059 20230619_1883_Aki_TMTPro18x_K_F4 165.18 139.06 780070 662470 730550 752230 866010 913590 933840 852890 1119100 837180 953500 865100 960080 806670 855220 1001300 1024600 924920 721100 607230 748460 754620 890600 910440 942910 875220 1122000 848500 985690 875770 974850 844240 881610 998450 977990 879670 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 11541000000 25932 1256 24353 48626;48627;48628;48629;48630;48631;48632;48633 39200;39201;39202;39203 39202 4 9606 Homo sapiens 0.021408140268476927 SVEAPTERPGER Unmodified 1326.6528 0.65279205 697 A0A024RBX2;Q9NWZ8 FAM51A1;GEMIN8 Gem-associated protein 8 yes no 0 0 1 2.5 0.5 1 1 31.266 31.341 3 4.5472E-13 6227 20230619_1881_Aki_TMTPro18x_K_F2 174.89 153.12 48495 38816 47903 48525 54492 54559 53554 51746 68860 57802 68637 64405 62920 52408 52533 65089 67170 59872 44832 35620 48805 48291 56035 54665 54524 53227 69228 58317 70132 64703 63909 55116 54477 64881 64075 56949 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48274000 25933 697 24354 48634;48635 39204;39205 39204 2 9606 Homo sapiens 0.0025317623585578986 SVEEEEQVWR Unmodified 1289.5888 0.58879481 1989 Q9P2E9;A7BI36;Q9P2E9-3;A1A5C5;A1A5C4;F8W7S5;B3KSG1;A0A087WU26 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 1 0 1 46.597 46.597 2 1.6271E-06 12955 20230619_1880_Aki_TMTPro18x_K_F1 170.5 139.43 61058 53906 66986 49806 55851 71631 69809 72610 76960 70024 77865 81775 84123 72487 74678 83069 88246 96463 56532 49319 67300 51010 59330 70803 69832 74002 78005 71270 80148 82180 85227 75651 76900 84029 84359 91449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155710000 25934 1989 24355 48636 39206 39206 1 9606 Homo sapiens -0.04441603921100068 SVEEFQCLNR Unmodified 1280.5819 0.58193529 1016 A0A0D9SEN2;P21127-3;A0A0D9SER5;A0A0D9SEI3;B4E3D9;P21127-2;P21127-8;P21127;Q9UQ88-3;Q9UQ88-4;Q9UQ88-2;P21127-9;P21127-6;Q5QPR3;Q9UQ88;Q5QPR4;P21127-12;A4VCI5;Q6P5Y5;P21127-4;P21127-10;P21127-5;Q96CA8;Q4VBY6;B4E0M9;B4E0N4;Q9UQ88-5;Q9UQ88-10;Q9UQ88-9 CDK11B;CDK11A;CDC2L1;CDC2L2 Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A yes no 0 0 0 4 0 1 46.874 46.916 2 1.623E-13 12552 20230619_1883_Aki_TMTPro18x_K_F4 224.36 193.67 93401 75510 86422 92878 87471 101660 100730 100470 105980 105840 90532 92763 112460 97481 86075 119040 111040 103010 86305 69280 88436 92492 91176 102090 100960 102850 107130 106290 94577 94948 112880 101520 89547 118290 105940 98041 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255670000 25935 1016 24356 48637 39207 39207 1 9606 Homo sapiens -0.04713240073306224 SVEEGKIDGIIDK Unmodified 1401.7351 0.73512469 2298 B4E1C9;Q53GS5;B2RBI2;Q96A49 SYAP1 Synapse-associated protein 1 yes no 0 0 1 5 0 1 52.715 52.787 4 0.00045959 14977 20230619_1885_Aki_TMTPro18x_K_F5 77.527 35.486 30791 20358 22551 28929 25848 31155 28257 27240 30771 29798 30063 26840 26745 23213 28159 28967 27540 24701 28375 18723 23685 28519 26696 31231 28425 28173 31177 29892 30717 27268 27470 24363 28579 28780 26337 23517 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65742000 25936 2298 24357 48638 39208 39208 1 9606 Homo sapiens 0.050326535241538295 SVEEISTLVQK Unmodified 1231.666 0.66598249 2055 A8K4V4;H0Y6Y8;B1AL05;Q8N983-4;Q8N983-3;Q8N983-2;Q8N983;Q8N983-6;Q8N983-7;Q86XN0;H0YBU8 MRPL43 39S ribosomal protein L43, mitochondrial yes no 0 0 0 6 0.816 1 1 1 57.373 57.435 3 0.00035743 16762 20230619_1887_Aki_TMTPro18x_K_F7 97.734 60.39 350840 315500 332350 361470 339280 442590 379820 389920 505970 367290 356670 345440 372670 333030 319780 401730 383000 401020 324470 289160 339530 362350 353750 440050 384430 401310 501980 372120 373530 351410 377580 347540 330050 402320 365960 380840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 830190000 25937 2055 24358 48639;48640;48641 39209 39209 1 9606 Homo sapiens 0.05941614295238651 SVEETLR Unmodified 832.42905 0.42904669 1441 A0A384MTR2;P30048-2;P30048;Q53HC2 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial yes no 0 0 0 2 0.816 1 1 1 37.548 37.586 2 0.0069009 8636 20230619_1882_Aki_TMTPro18x_K_F3 129.4 47.763 215750 162610 194190 230290 261810 267630 264820 267400 302690 251280 297000 306910 285180 252320 276360 255870 357410 317420 199240 149460 200290 227400 266580 267760 267950 272760 305800 256570 304560 307140 291170 262280 285500 260600 340910 300980 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1542199999.9999998 25938 1441 24359 48642;48643;48644 39210 39210 1 9606 Homo sapiens 0.0061293259238937026 SVELDNDDGGGSAAQK Unmodified 1561.6856 0.68560832 1036 O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;Q57Z91;O60282-2;A0A7I2V352;A0A7I2YQQ7;Q59GB8 KIF5C Kinesin heavy chain isoform 5C;Kinesin-like protein yes no 0 0 0 1.5 0.5 1 1 42.716 42.757 3 1.3454E-14 11074 20230619_1881_Aki_TMTPro18x_K_F2 180.27 157.18 44551 37132 42516 50688 48842 50488 54327 52430 70872 57092 63801 60648 66513 63328 51465 48394 77351 65792 41185 34101 43505 50057 50380 51115 54949 53566 70932 57601 65867 61476 67155 64447 53999 49870 73679 62348 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91930000 25939 1036 24360 48645;48646 39211 39211 1 9606 Homo sapiens -0.07276706222592111 SVELEEALPVTTAEGMAK Acetyl (Protein N-term);Oxidation (M) 1931.9398 0.93977409 4293 Q92522 H1FX Histone H1x yes yes 1 1 0 2 0.816 1 1 1 62.865 62.878 3 3.8535E-06 19662 20230619_1880_Aki_TMTPro18x_K_F1 48.883 37.444 76480 69267 78615 92643 66725 79879 78526 77656 78648 91720 97010 87360 94692 70225 93986 86513 80958 103110 70783 63581 79591 91442 70591 81675 78548 79905 80894 91768 98517 88316 96575 73954 94833 87623 77740 97677 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 478060000 25940 4293 24361 48647;48648;48649 39212;39213 39212 2717 2 9606 Homo sapiens 0.011081797616725453 SVELEEALPVTTAEGMAK Acetyl (Protein N-term) 1915.9449 0.94485947 4293 Q92522 H1FX Histone H1x yes yes 1 0 0 2.5 0.5 1 1 64.242 64.262 2;3 1.9514E-18 20473 20230619_1881_Aki_TMTPro18x_K_F2 100.41 68.583 128940 113810 114710 134130 89583 109400 112740 127920 107970 121540 130540 115020 137920 122640 127230 127440 126460 136780 119170 104340 117450 133490 95749 112930 112310 129240 111210 122930 133100 117400 140030 126520 129520 128530 121080 129770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 518350000 25941 4293 24361 48650;48651 39214;39215 39214 2 9606 Homo sapiens 0.023524836242813763 SVEQQVIGFSGLSDDK Unmodified 1707.8315 0.83154427 404 A8K5J7;A0A024R6M6;Q9UL15;Q9UL15-2 BAG5 BAG family molecular chaperone regulator 5 yes no 0 0 0 5 0 1 60.466 60.518 3 0.00033215 18151 20230619_1885_Aki_TMTPro18x_K_F5 84.829 63.272 27232 24014 28311 29574 36081 38379 34412 29732 37173 30124 28634 26622 26225 22296 36401 25818 26961 25585 25201 22026 28794 29517 36801 37947 34862 30992 37365 30339 29687 27036 27319 23332 36255 25913 25878 24309 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31460000 25942 404 24362 48652 39216 39216 1 9606 Homo sapiens 0.005941762934298822 SVFALTNGIYPHK Unmodified 1445.7667 0.76669959 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 RPL6 60S ribosomal protein L6 yes no 0 0 0 5 0 1 57.002 57.064 3 4.4724E-07 16675 20230619_1885_Aki_TMTPro18x_K_F5 144.27 111.07 46114 37853 46442 43442 47743 50469 46533 49882 47707 53159 46327 49646 52508 46601 48352 53285 51293 53976 42644 34704 47144 43528 49431 50503 47054 51068 48543 53427 47898 50438 53211 48523 49431 53468 49067 51250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 307430000 25943 680 24363 48653 39217 39217 1 9606 Homo sapiens 0.061646910687613854 SVFDIPIFTEEFLNHSK Unmodified 2022.0098 0.0098429899 2543 B4DMG1;Q9NP66 HMG20A High mobility group protein 20A yes no 0 0 0 8 0 1 65.009 65.028 3 2.9837E-06 19959 20230619_1888_Aki_TMTPro18x_K_F8 104.44 89.965 55185 41859 50585 55672 39310 54160 46146 49907 56364 63548 59017 61872 66397 59642 61756 77097 69243 83569 50970 38446 51634 55056 42022 54754 46488 51646 57000 63438 60773 62823 67340 62524 63383 77502 66278 79253 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28223000 25944 2543 24364 48654 39218;39219 39218 2 9606 Homo sapiens 0.039718462124938014 SVFEAFGK Unmodified 883.44397 0.44396847 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8;A0A0J9YVR6;A0A0J9YWM1;H0YCP8 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 0 0 2.8 2.64 2 2 1 58.5 58.514 2;3 0.0022657 17874 20230619_1880_Aki_TMTPro18x_K_F1 129.47 66.752 478070 413500 500390 512760 450030 541650 524850 544270 594010 588580 548160 517590 606840 481900 538260 604360 593430 586670 442390 379320 505830 510140 473770 545480 527180 556940 599620 590300 566940 527610 614040 504990 551940 604180 567210 557430 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1575199999.9999998 25945 1044 24365 48655;48656;48657;48658;48659 39220;39221;39222 39220 3 9606 Homo sapiens -0.002415755396100394 SVFEEEVR Unmodified 993.47673 0.47672516 1473 Q03252;A0A384NPH0 LMNB2 Lamin-B2 yes no 0 0 0 1.5 0.5 1 1 44.759 44.801 2 0.00014054 12216 20230619_1880_Aki_TMTPro18x_K_F1 174.73 136.43 925700 713510 801180 960180 765540 901750 1026300 999960 1223900 1132700 1216000 1186200 1149200 1073600 1025100 1222800 1267900 1303900 854710 655370 824860 948460 805920 918260 1025600 1018500 1234700 1139400 1244700 1198100 1170000 1118700 1059100 1230400 1211000 1237400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 784160000 25946 1473 24366 48660;48661 39223;39224 39223 2 9606 Homo sapiens -0.02027413207429163 SVFINNVLSK Unmodified 1119.6288 0.62880913 4290 Q8WYP5;Q8WYP5-3;Q8WYP5-2;B3KVE5 AHCTF1 Protein ELYS yes no 0 0 0 4 0 1 59.648 59.65 3 0.038095 18182 20230619_1883_Aki_TMTPro18x_K_F4 57.836 32.619 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25947 4290 24367 48662 39225 39225 1 9606 Homo sapiens 0.07377987540121467 SVFLDQMK Unmodified 966.48445 0.48445308 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;B5MCE7;E9PFD4 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 0 8 0 1 55.121 55.188 2 0.0021416 15801 20230619_1888_Aki_TMTPro18x_K_F8 140.5 116.17 332550 287150 319560 283420 337740 467260 411240 384800 501730 138530 137160 120820 135780 101510 231820 135680 139070 114530 307510 262870 325940 289150 352230 456440 412780 392160 490210 153420 157950 123100 143200 107200 228380 134940 133790 109100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138540000 25948 607 24368 48663 39226;39227 39227 2 9606 Homo sapiens -0.0001297721150876896 SVFLEQMK Unmodified 980.5001 0.50010314 4151 Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;Q53FN7;Q7L1Q6-2;D3DN77;H0Y503;Q3LIC9 BZW1;hCG_2022736;Nbla10236 Basic leucine zipper and W2 domain-containing protein 1 yes no 0 0 0 8 0 1 55.497 55.559 2 0.0024018 15957 20230619_1888_Aki_TMTPro18x_K_F8 135.83 78.727 137940 117010 125990 128840 113950 154970 139590 119100 145160 78594 70689 53578 57618 49868 89097 71613 69037 40990 127490 107220 128860 129500 120250 153850 139360 123140 144380 81003 75428 55502 60746 52681 88834 69974 66054 39360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61318000 25949 4151 24369 48664 39228 39228 1 9606 Homo sapiens 0.009073093055462778 SVFPEQANNNEWAR Unmodified 1660.7594 0.75938238 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O43242-2 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 4.5 0.5 1 1 50.296 50.35 2 1.7931E-21 14163 20230619_1883_Aki_TMTPro18x_K_F4 218.75 166.04 50053 46423 51833 52585 47359 59990 61050 52587 65239 70987 61999 63685 70674 51230 56085 70504 63458 64006 46335 42538 52461 52708 49962 59927 60875 54744 66149 70528 64145 64538 71105 54315 57775 70134 60649 60860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102170000 25950 2361 24370 48665;48666 39229;39230 39229 2 9606 Homo sapiens -0.044566932696170625 SVGDGETVEFDVVEGEK Unmodified 1794.816 0.81595379 3745 P67809;H0Y449;Q6PKI6;Q7KZ24;A0A024RAQ1;A0A384MDP4;B2RCC2;A0A024RAV4;P16989;Q59EB5;P16989-2;P16989-3;Q9Y2T7;A0A0D9SEI8;Q59HE1 YBX1;CSDA;YBX3;YBX2 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 3;Y-box-binding protein 2 yes no 0 0 0 2.2 1.17 2 1 1 1 57.366 57.377 2;3 1.5372E-47 17432 20230619_1880_Aki_TMTPro18x_K_F1 319.32 271.61 133750 122760 136380 149990 113730 136960 135110 139270 150600 175120 157210 159480 181900 150510 152840 198200 165600 179750 123790 112570 138070 149080 120590 139530 135550 143090 152990 174540 162070 162320 183460 158090 156890 197240 158420 170870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2286100000 25951 3745 24371 48667;48668;48669;48670;48671 39231;39232;39233 39231 3 9606 Homo sapiens -0.0496615501431279 SVGDNSSDLSNVAVIDGNR Unmodified 1917.9028 0.90281174 1618 O95163;B4E3I9;A0A6Q8PHC9;Q4LE38;Q8N516;A0A6Q8PFH9;F5H2T0;B3KXE7;A0A6Q8PF66;A0A6Q8PGW3;A0A6Q8PHF4;A0A6Q8PG86;A0A6Q8PEX6;A0A6Q8PFB7;A0A6Q8PHI5;A0A6Q8PH48;A0A6Q8PFN8;A0A6Q8PHA0;A0A6Q8PGR0;A0A6Q8PF69 IKBKAP;IKBKAP variant protein Elongator complex protein 1 yes no 0 0 0 3 0 1 50.162 50.237 3 1.1687E-19 14226 20230619_1882_Aki_TMTPro18x_K_F3 181.94 166.75 48907 35316 46569 48299 51113 61020 61514 46620 73389 51940 54276 56683 48863 49452 62009 59477 49738 55027 45172 32453 47596 47855 53063 60387 61725 48812 73251 52421 56398 57084 50718 51731 62138 59375 47744 52293 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103620000 25952 1618 24372 48672 39234 39234 1 9606 Homo sapiens -0.019423557398340563 SVGEVMGIGR Oxidation (M) 1019.507 0.50697943 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 1 0 5 0 1 40.391 40.479 2 0.041077 9722 20230619_1885_Aki_TMTPro18x_K_F5 65.224 43.949 86584 67216 72258 76525 112990 110850 98584 96019 133960 98834 112360 108310 105120 83628 106810 108160 138960 115680 79926 61634 75220 76972 113740 109190 101270 99167 133500 100100 115950 108720 107610 88410 110350 108720 132490 109880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122430000 25953 2980 24373 48673 39235 39235 1766 1 9606 Homo sapiens -0.001993778138626112 SVGEVMGIGR Unmodified 1003.5121 0.51206481 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 7.5 0.5 1 1 48.527 48.614 2 1.2277E-06 12952 20230619_1888_Aki_TMTPro18x_K_F8 148.14 119.63 266980 212570 257670 232100 266110 310440 271340 261470 325020 346400 325610 320610 365040 277710 327460 404470 376400 378300 246760 194820 262510 233940 276110 306900 274990 272700 328360 344770 335740 325300 369360 294730 336770 402690 359680 359580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221890000 25954 2980 24373 48674;48675 39236;39237 39237 2 9606 Homo sapiens 0.010449260487462197 SVGGACVLVA Unmodified 931.4797 0.47970205 3592 Q6NZ52;P46776;E9PJD9;E9PLX7 RPL27A 60S ribosomal protein L27a yes no 0 0 0 6.5 0.5 1 1 53.928 54 2 0.00079237 15330 20230619_1887_Aki_TMTPro18x_K_F7 117.17 99.134 203380 176550 183480 192280 175960 243520 212580 197870 275000 173810 130020 133580 198570 145160 140790 203660 203040 172220 187980 161750 188050 193590 184890 241230 214010 204670 270670 176020 143200 137930 197730 152560 147940 201760 193450 164020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1503299999.9999998 25955 3592 24374 48676;48677 39238;39239 39239 2 9606 Homo sapiens 0.01122138645735049 SVGGSFYLQSK Unmodified 1171.5873 0.58733824 974 P57737-3;A0A0A6YYL4;Q9Y3D7;I3L1U7;I3L0X9;I3L3T0 CORO7;CORO7-PAM16;PAM16 Coronin-7;Coronin;Mitochondrial import inner membrane translocase subunit TIM16 yes no 0 0 0 2.5 0.5 1 1 51.362 51.42 3 0.00027933 14754 20230619_1882_Aki_TMTPro18x_K_F3 104.43 74.767 132510 124350 129440 140450 122730 146080 148710 139950 193860 132260 129210 127180 127640 104550 158220 141650 146120 130800 122610 113940 131730 140620 128860 147150 149770 143240 192160 134050 135600 128620 131770 110560 159580 141200 139820 124400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149550000 25956 974 24375 48678;48679 39240 39240 1 9606 Homo sapiens 0.008408067807977204 SVGGSGGGSFGDNLVTR Unmodified 1565.7434 0.74339797 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-4;P02545-5 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 6.5 0.5 1 1 46.495 46.58 2 1.7755E-47 12380 20230619_1886_Aki_TMTPro18x_K_F6 302.35 251.65 171380 130010 135380 185710 228070 259860 268660 272040 319360 216180 219320 231340 258040 204690 232720 252490 244340 242600 158130 119510 142320 183820 230830 257270 269820 275460 318190 222100 231530 233340 260880 214600 237830 252370 233660 230530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 742920000 25957 1428 24376 48680;48681 39241;39242 39241 2 9606 Homo sapiens -0.016843995065300987 SVGKPALER Unmodified 955.54508 0.5450795 2654 B4E357;Q5JPB8;Q53HL4;Q53GT4;G3V1D3;G3V180;Q9NY33-4;Q9NY33;Q9NY33-2 DKFZp686O1117;DPP3 Dipeptidyl peptidase 3 yes no 0 0 1 4.5 3.5 1 1 37.543 37.536 3 0.011793 8504 20230619_1888_Aki_TMTPro18x_K_F8 70.412 42.33 281100 197100 258920 272800 338680 336810 284200 297410 361670 328260 381750 396100 320740 269650 353490 284870 371050 295980 259530 181170 266060 270020 343920 334860 292180 307340 364760 332160 388200 394490 330810 283080 359430 286940 354330 281290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 197320000 25958 2654 24377 48682;48683 39243;39244 39244 2 9606 Homo sapiens 0.0655287616308442 SVGMIAGGTGITPMLQVIR Unmodified 1900.0274 0.027424084 311 P00387-3;P00387;P00387-2;A0A8J8YWN6;A0A8I5KR71;A0A024R4X0;A0A8J8Z3C6;Q6ZVI6;A0A8I5QKT9;A0A8I5KPU0;A0A087WZB1 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form;NADH-cytochrome b5 reductase yes no 0 0 0 6 0 1 63.037 63.085 3 3.5026E-31 19510 20230619_1886_Aki_TMTPro18x_K_F6 226.79 191.76 72762 70300 76462 80351 60727 81220 91511 86012 98950 88490 82024 73950 91191 74466 87759 94276 97528 95531 67385 64414 77185 80361 65238 82153 90696 87617 99684 88879 85320 75801 92616 77884 89872 94469 93206 90730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 358420000 25959 311 24378 48684 39245 39245 1 9606 Homo sapiens 0.11341146942095293 SVGNTIDPVILFQK Unmodified 1529.8453 0.84534384 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 2 0.707 1 2 1 62.868 62.88 2;3 7.545E-23 19920 20230619_1881_Aki_TMTPro18x_K_F2 241.92 213.76 143020 121780 144050 158510 117270 130520 145460 147050 153170 164780 182510 194450 175060 159930 184740 195570 188200 218160 132290 111780 145930 156700 124670 134490 145360 149630 156790 166410 185680 194880 179430 167960 187950 197190 180240 206860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3559599999.9999995 25960 630 24379 48685;48686;48687;48688 39246;39247;39248 39248 3 9606 Homo sapiens 0.10161498583170214 SVGPDFGK Unmodified 805.39702 0.39701828 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 6 0 1 46.024 46.11 2 0.0088109 12171 20230619_1886_Aki_TMTPro18x_K_F6 107.29 58.534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25961 3758 24380 48689 39249 39249 1 9606 Homo sapiens -0.013464350907497646 SVGPDFGKK Unmodified 933.49198 0.4919813 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 1.5 0.5 1 1 43.296 43.337 3 0.063045 11584 20230619_1880_Aki_TMTPro18x_K_F1 46.406 22.185 204810 169840 196250 213130 265550 217310 220630 235310 275130 232050 277470 228440 234160 193890 263080 229150 249390 181720 189330 155840 201100 211760 268640 220050 226790 239030 277150 234620 282390 231090 241670 202950 266040 227220 238280 173350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207280000 25962 3758 24381 48690;48691 39250 39250 1 9606 Homo sapiens 0.02257498380436118 SVGQGYSVGQSMR Unmodified 1354.6299 0.62994811 1600 Q6DHZ8;B2RBM8;A0A669KBJ7;Q9H2P0;A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein yes no 0 0 0 8 0 1 41.028 41.021 2 0.014452 9896 20230619_1888_Aki_TMTPro18x_K_F8 69.721 58.231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25963 1600 24382 48692 39251 39251 1 9606 Homo sapiens -0.03318166153280799 SVIDPVPAPVGDSHVDGAAK Unmodified 1929.9796 0.97960549 3839 Q13177;A8K5M4 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase yes no 0 0 0 4.5 0.5 1 1 49.256 49.313 3 2.8583E-16 13503 20230619_1885_Aki_TMTPro18x_K_F5 159.01 147.9 249030 220220 249640 255040 227640 257830 243190 243010 260570 307280 302880 319750 337890 249150 260310 381800 330620 383320 230390 201870 253230 254810 238660 260230 245000 251050 266450 307360 310330 321710 339840 266540 270640 381200 316020 363870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 628760000 25964 3839 24383 48693;48694 39252;39253 39253 2 9606 Homo sapiens 0.05181487547247343 SVIDYQTHFR Unmodified 1264.62 0.62003536 970 Q3B7W7;B4E2C1;A0A0A6YYA0;Q86XR7-2;Q9Y3B3-2;Q9Y3B3 TMED7;TMED7-TICAM2 Transmembrane emp24 domain-containing protein 7 yes no 0 0 0 7.67 0.471 1 2 43.25 43.283 2;3 6.1253E-15 10599 20230619_1887_Aki_TMTPro18x_K_F7 199.4 181.29 78513 70017 88781 91779 97443 106480 104790 103970 116900 97895 106650 100940 109000 88506 105150 105740 108840 114280 72718 64260 89490 91087 100690 106480 105600 106230 117950 99385 109990 101950 110960 92656 107200 106460 104140 108430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 515540000 25965 970 24384 48695;48696;48697 39254;39255 39254 2 9606 Homo sapiens -0.0016898609637792106 SVLADQGK Unmodified 816.43413 0.43413207 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 0 5.5 0.5 1 1 41.227 41.317 2 0.0027025 10070 20230619_1885_Aki_TMTPro18x_K_F5 122.52 40.733 157290 90352 170190 189780 271900 284290 208800 240950 218610 159120 251200 275140 223620 209810 237890 112850 266010 241610 145270 83612 173430 184470 272510 279110 214600 246870 223200 168780 255210 271610 229900 213470 242470 122630 254080 228210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131420000 25966 4629 24385 48698;48699 39256 39256 1 9606 Homo sapiens 0.018572364549982012 SVLAETEGILQK Unmodified 1286.7082 0.70818166 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7;B3KWP6;B7Z6P3;G3V5P0 KTN1 Kinectin yes no 0 0 0 6 0.816 1 1 1 60.95 61 3 6.095E-07 18563 20230619_1886_Aki_TMTPro18x_K_F6 147.37 108.73 45768 47157 55200 61400 28893 49417 49236 53627 53876 69354 61965 66477 64802 56941 55295 94583 69330 67520 42461 43256 54952 60677 32750 50933 48664 54925 55010 69119 63344 67330 65625 60989 57392 92805 66186 64425 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 554660000 25967 380 24386 48700;48701;48702 39257 39257 1 9606 Homo sapiens 0.0762958970362888 SVLALTHEGR Unmodified 1081.588 0.58800695 3958 Q1WWL2;Q4QQP8;Q9P2B2 PTGFRN Prostaglandin F2 receptor negative regulator yes no 0 0 0 6.5 0.5 1 1 40.739 40.819 3 0.0019599 9625 20230619_1887_Aki_TMTPro18x_K_F7 85.813 65.816 124010 89268 90362 99066 144800 152550 125480 127570 240220 48546 46812 43671 58138 42717 68893 52770 47270 49791 114330 81861 95456 99944 145860 149630 130950 129900 229910 53590 57602 44620 59521 44662 68583 52755 45454 47314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61375000 25968 3958 24387 48703;48704 39258 39258 1 9606 Homo sapiens 0.05047646220509705 SVLCSTPTINIPASPFMQK Unmodified 2090.054 0.054032765 4376 V9HWH0;Q96KB5;Q96KB5-2;E5RIE1 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase yes no 0 0 0 5 0 1 62.851 62.898 3 0.016473 19258 20230619_1885_Aki_TMTPro18x_K_F5 49.463 24.904 64704 95844 88976 90507 63697 101850 76627 78155 115160 65049 67019 62253 93011 70598 97401 94323 65675 73115 60318 87580 88028 92040 68769 101570 77718 81155 113060 66512 72161 63717 94238 73813 97202 93237 63196 69642 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 666060000 25969 4376 24388 48705 39259 39259 1 9606 Homo sapiens 0.05260791042792334 SVLDAAQIVGLNCLR Unmodified 1627.8716 0.87157537 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;B4DZB4;B4DZP3 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 3 0 1 62.976 63.006 2 3.1597E-05 19661 20230619_1882_Aki_TMTPro18x_K_F3 127.87 73.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25970 769 24389 48706 39260 39260 1 9606 Homo sapiens 0.08275444483001593 SVLEEMGLA Unmodified 947.46338 0.46338328 11 A0A2R8YGH5;A0A024QYT6;P61966 AP1S1 AP-1 complex subunit sigma-1A yes no 0 0 0 3.5 0.5 1 1 64.617 64.638 2 0.002366 20379 20230619_1882_Aki_TMTPro18x_K_F3 112.75 94.979 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25971 11 24390 48707;48708 39261;39262 39261 2 9606 Homo sapiens -0.012449873110313092 SVLELIPELNEK Unmodified 1382.7657 0.76569654 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HHY9;A0A804HJA1;A0A804HLL8 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 5 0.816 1 1 1 63.886 63.92 3 0.0020928 19678 20230619_1885_Aki_TMTPro18x_K_F5 76.522 71.243 166830 127070 152210 175560 151020 185550 135050 201120 188220 189370 192050 245390 248220 205900 176510 257920 243780 253640 154080 116750 155940 173410 156840 187120 138980 203910 189030 193650 199590 245180 248180 216400 184910 257870 232670 240920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 777670000 25972 1723 24391 48709;48710;48711 39263;39264;39265 39263 3 9606 Homo sapiens 0.08962431909208135 SVLEQTK Unmodified 803.43888 0.43888309 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;O14992 HSPA4;HEL-S-5a;HS24/p52 Heat shock 70 kDa protein 4 yes no 0 0 0 5.5 0.5 1 1 41.847 41.932 2 1.0626E-12 10320 20230619_1886_Aki_TMTPro18x_K_F6 195.6 85.262 117880 57099 152730 158160 194120 201790 139050 168890 168340 136720 198100 212110 176980 151610 175010 91293 218810 175300 108990 53177 152860 151750 196750 199800 144480 173910 170900 142210 201020 209650 181210 155260 179910 97723 208630 165770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157440000 25973 3544 24392 48712;48713 39266;39267 39267 2 9606 Homo sapiens 0.02930120597750374 SVLGEADQK Unmodified 945.47673 0.47672516 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 3.5 0.5 1 1 43.66 43.716 2 0.00010024 11208 20230619_1882_Aki_TMTPro18x_K_F3 155.58 13.654 156120 106100 158460 168500 190880 191890 179290 186090 225050 191730 243520 251260 241310 221690 220470 178840 276590 252540 144230 97701 161300 165260 195300 192090 182910 190660 227270 195350 248910 251250 245510 227390 227400 184710 263930 239170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 260680000 25974 1637 24393 48714;48715 39268;39269 39268 2 9606 Homo sapiens 0.0018058679256682808 SVLHEVMEQQTLSIAK Unmodified 1811.9451 0.94513424 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57;A0A3B3ITP6;A0A3B3IRR8 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 7 0 1 56.879 56.934 3 0.04148 16549 20230619_1887_Aki_TMTPro18x_K_F7 53.828 41.268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25975 471 24394 48716 39270 39270 1 9606 Homo sapiens 0.0716394813482566 SVLIMGR Unmodified 774.44219 0.44219433 3806 Q06210-2;Q06210;A0A6I8PRN4;A0A6I8PTT9 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 0 3 0 1 46.55 46.628 2 0.055778 12604 20230619_1882_Aki_TMTPro18x_K_F3 83.614 40.614 155860 134380 148780 159590 139960 164610 171860 172160 203860 146130 164860 162290 164130 134360 153210 167340 175580 169490 144110 123220 151680 159200 147060 166230 172410 174690 204080 149650 170930 163150 167020 141280 157300 167710 167740 160980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38261000 25976 3806 24395 48717 39271 39271 1 9606 Homo sapiens 0.04595092170779935 SVLPEGPVGHSGK Unmodified 1262.6619 0.66190017 2971 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 MPDZ Multiple PDZ domain protein yes no 0 0 0 7 0 1 41.667 41.738 3 0.00025339 9980 20230619_1887_Aki_TMTPro18x_K_F7 95.264 68.166 33538 28525 30893 38184 44392 42217 42828 47254 47145 49545 52706 46460 50441 39931 50305 47847 54179 50521 30999 26189 31845 37812 44951 42509 43411 47963 48025 49836 53679 47103 51524 41848 51353 48114 51775 47970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35027000 25977 2971 24396 48718 39272 39272 1 9606 Homo sapiens 0.04107569592156324 SVLQAVQK Unmodified 871.51272 0.51271674 2026 Q6IAX4;A8K3B9;Q16799-3;B7Z4K5;A8MT72;Q2NKQ5;Q16799-2;Q16799 RTN1 Reticulon;Reticulon-1 yes no 0 0 0 1.67 0.471 1 2 46.467 46.517 2;3 0.00021361 12456 20230619_1881_Aki_TMTPro18x_K_F2 189.53 0 458450 321960 397070 468070 423840 417820 443760 441430 581930 295810 334340 311660 285030 256600 420040 322810 396230 290550 423070 296110 409210 459860 438650 426830 450390 445670 574110 307740 352640 314090 299130 269870 422850 321870 378610 276690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 326390000 25978 2026 24397 48719;48720;48721 39273;39274;39275 39274 3 9606 Homo sapiens 0.071820887600893 SVLQPSQQK Unmodified 1013.5506 0.55055881 4706 Q9Y2A7;Q9Y2A7-2;A0A994J4I5;A0A994J6K9 NCKAP1 Nck-associated protein 1 yes no 0 0 0 8 0 1 40.516 40.508 2 9.8372E-16 9687 20230619_1888_Aki_TMTPro18x_K_F8 182.76 134.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25979 4706 24398 48722 39276 39276 1 9606 Homo sapiens 0.04432554954905754 SVLRPAVLQAPQPK Unmodified 1502.8933 0.89329709 2698 Q9H6Z4;Q9H6Z4-2;Q9H6Z4-3;Q53GE1;B7Z7F3;Q308M8;B7Z5P4;A0A384ME25;K7EN31 RANBP3 Ran-binding protein 3 yes no 0 0 1 5.5 0.5 1 1 47.356 47.435 3 4.5332E-05 12651 20230619_1885_Aki_TMTPro18x_K_F5 107.11 79.99 227100 191220 214620 217550 241880 279380 248620 251540 304280 128440 121510 109780 119070 94816 172570 149130 143780 96067 209940 175280 219510 218400 249470 277140 251890 255580 299010 136180 133220 112010 124180 101130 172800 146110 137510 91982 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144270000 25980 2698 24399 48723;48724 39277;39278 39277 2 9606 Homo sapiens 0.16196617293894633 SVLSEGHQR Unmodified 1011.5098 0.50975662 2317 B4DRZ6;B2RDJ6;O76071 CIAO1 Probable cytosolic iron-sulfur protein assembly protein CIAO1 yes no 0 0 0 4 0 1 28.692 28.764 3 2.0664E-06 5133 20230619_1883_Aki_TMTPro18x_K_F4 172.23 138.97 10758 7423.4 9352.7 9684.8 9650.6 11007 9393 10796 7843.5 9150.3 11204 14848 9557.7 10626 10262 4530.9 10850 14531 9927.1 6819.4 9623.1 9612.2 9995.4 11022 9449.4 11000 8215.7 9499.8 11293 14642 9854.3 10779 10423 5230.6 10401 13682 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3175400 25981 2317 24400 48725 39279 39279 1 9606 Homo sapiens 0.004462136352913149 SVMDATQIAGLNCLR Unmodified 1647.8073 0.80726055 3544 P34932;V9HW33;Q59GF8;B4DUS3;B4DIZ3;O14992;Q7KYN0 HSPA4;HEL-S-5a;HS24/p52;HS24/P52 Heat shock 70 kDa protein 4 yes no 0 0 0 1.5 0.5 1 1 59.499 59.506 3 0.0050042 18462 20230619_1881_Aki_TMTPro18x_K_F2 69.201 57.93 97429 84233 94047 105600 86184 108010 109170 105700 107750 114640 122060 115180 119630 110120 121330 132960 118790 138210 90096 77278 95793 104910 90837 108950 108720 108410 110430 115390 124440 116800 122300 114940 123280 133510 113820 131150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209430000 25982 3544 24401 48726;48727 39280 39280 1 9606 Homo sapiens 0.009269213345760363 SVMDATQIAGLNCLR Oxidation (M) 1663.8022 0.80217518 3544 P34932;V9HW33;Q59GF8;B4DUS3;B4DIZ3;O14992;Q7KYN0 HSPA4;HEL-S-5a;HS24/p52;HS24/P52 Heat shock 70 kDa protein 4 yes no 0 1 0 8 0 1 54.224 54.295 3 7.1085E-11 15390 20230619_1888_Aki_TMTPro18x_K_F8 158.52 142.89 52761 45964 53507 58500 56047 56460 53913 57192 71732 57334 60357 61450 67658 56357 61291 72570 62079 63210 48812 42175 54347 58020 57944 57280 55049 58388 71587 58092 62786 62056 68514 59146 62544 72113 59397 60132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 241330000 25983 3544 24401 48728 39281 39281 2212 1 9606 Homo sapiens -0.00317382528055532 SVMEELK Oxidation (M) 850.41062 0.41061943 3696;5 P61326;F5H6P7;F5H3U9;A0A023T6R1;Q96A72;F5H6N1 MAGOH;MAGOHB;FLJ10292 Protein mago nashi homolog;Protein mago nashi homolog 2 no no 0 1 0 3 0 1 42.084 42.147 2 0.02755 10489 20230619_1882_Aki_TMTPro18x_K_F3 92.47 46.518 106120 83505 103170 113210 145990 140830 139150 131890 162880 117340 156800 137380 137460 117530 131780 130360 153090 141870 98077 76701 105750 112220 147930 140130 141370 134980 164140 120070 160180 137990 140650 122570 135270 131460 146190 134660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60389000 25984 3696;5 24402 48729 39282 39282 0 1 9606 Homo sapiens -0.020569453738289667 SVMEELK Unmodified 834.4157 0.41570481 3696;5 P61326;F5H6P7;F5H3U9;A0A023T6R1;Q96A72;F5H6N1 MAGOH;MAGOHB;FLJ10292 Protein mago nashi homolog;Protein mago nashi homolog 2 no no 0 0 0 4 0 1 50.08 50.115 2 0.022901 13996 20230619_1883_Aki_TMTPro18x_K_F4 101.28 32.369 269300 196760 222360 239220 256820 302870 279690 270850 326460 294070 303210 322200 351310 281560 275500 364670 363010 328640 248490 180580 230450 238920 264970 300650 282060 279520 328990 296900 314350 324500 353410 296170 286790 362850 346240 312650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 765390000 25985 3696;5 24402 48730 39283 39283 1 9606 Homo sapiens -0.00812641511208767 SVMEELKR Unmodified 990.51682 0.51681584 3696;5 P61326;F5H6P7;F5H3U9;A0A023T6R1;Q96A72;F5H6N1 MAGOH;MAGOHB;FLJ10292 Protein mago nashi homolog;Protein mago nashi homolog 2 no no 0 0 1 7 0 1 44.48 44.563 3 0.0063576 11147 20230619_1887_Aki_TMTPro18x_K_F7 89.542 36.07 199210 206120 204850 189190 235430 255460 260570 217420 237910 194130 186410 137160 206230 134560 259320 157760 158570 140330 184550 188470 208020 193510 242620 252580 260440 224170 241550 195830 194420 141890 211980 140340 256620 157540 152570 133540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151330000 25986 3696;5 24403 48731 39284 39284 1 9606 Homo sapiens 0.021178101914983927 SVMLYAAEMIPK Unmodified 1351.688 0.68798027 860 A0A087WYR0;P09132 SRP19 Signal recognition particle 19 kDa protein yes no 0 0 0 2 0 1 63.444 63.452 3 0.016742 20195 20230619_1881_Aki_TMTPro18x_K_F2 62.14 39.261 36612 29447 34264 37543 33462 35160 39820 36030 46399 38270 41304 42255 47309 40703 42150 47334 43489 47330 33833 27027 35009 37218 34988 35761 39974 36831 46669 38700 42888 42677 47852 42384 43056 47447 41624 44941 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89131000 25987 860 24404 48732 39285 39285 1 9606 Homo sapiens 0.026203794477623887 SVMSGDQLREDR Oxidation (M) 1407.6412 0.64124108 495 Q14C86-6;Q14C86;Q14C86-2;Q14C86-5;Q14C86-4;A0A024R8A2;A0A024R862;F8W9S7;Q14C86-3;A0A024R875;B4DK42;C9IZ08;B4DGD8;H0Y7I9;H0Y4E7;B0QZ65 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 0 1 1 2 0 1 31.233 31.296 3 0.0050351 6229 20230619_1881_Aki_TMTPro18x_K_F2 72.34 59.573 14737 14746 14260 14373 16107 21775 13627 16330 20491 18985 24855 24018 26726 25531 21129 28920 29675 29361 13642 13491 14556 14648 16566 21330 14110 17119 20653 19214 25363 24230 26978 26450 22098 29009 28308 27884 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19742000 25988 495 24405 48733 39286 39286 304 1 9606 Homo sapiens -0.046273888498035376 SVMSGDQLREDR Unmodified 1391.6463 0.64632646 495 Q14C86-6;Q14C86;Q14C86-2;Q14C86-5;Q14C86-4;A0A024R8A2;A0A024R862;F8W9S7;Q14C86-3;A0A024R875;B4DK42;C9IZ08;B4DGD8;H0Y7I9;H0Y4E7;B0QZ65 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 0 0 1 3 0 1 36.495 36.55 3 2.6788E-05 8194 20230619_1882_Aki_TMTPro18x_K_F3 124.48 94.847 56316 46780 63144 60978 68655 86333 65834 71449 90954 69174 68486 76128 79399 69716 71896 77707 90415 96028 52131 42941 63656 60737 70911 84991 67328 73927 90305 70306 71850 76737 80381 72569 74293 78964 86369 90993 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37769000 25989 495 24405 48734 39287 39287 1 9606 Homo sapiens -0.033830849871947066 SVMTEEYK Oxidation (M) 1001.4376 0.43756246 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q96AE4;E9PEB5;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 1 0 3.5 0.5 1 1 39.809 39.858 2 0.0019162 9485 20230619_1883_Aki_TMTPro18x_K_F4 125.49 97.968 167230 105460 141490 181510 172120 220570 175180 193770 243590 181480 225980 278650 247540 218230 177380 283460 334130 322000 154210 97245 146610 177360 176880 219240 178560 199480 243350 187140 233870 276430 248890 230490 190830 285600 318090 305470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 180990000 25990 2644;4322 24406 48735;48736 39288;39289 39289 1602 2 9606 Homo sapiens -0.06309881553306695 SVMTEEYK Unmodified 985.44265 0.44264784 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q96AE4;E9PEB5;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 3.5 0.5 1 1 44.688 44.746 2 0.00039615 11603 20230619_1883_Aki_TMTPro18x_K_F4 179.21 140.19 383430 277420 321280 376600 352390 475860 383570 375690 550530 482460 490810 576950 628000 527980 358600 769730 668250 711610 353820 254900 332450 373230 365570 471060 389980 393620 549000 485090 512550 580020 624150 558890 388770 765020 636680 676350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 327580000 25991 2644;4322 24406 48737;48738 39290;39291 39291 2 9606 Homo sapiens -0.05065577690686496 SVMTEEYKVPDGMVGFIIGR 2 Oxidation (M) 2259.0915 0.091540484 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q96AE4;E9PEB5;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 2 1 7 0 1 56.746 56.804 3 0.0057237 16503 20230619_1887_Aki_TMTPro18x_K_F7 64.298 56.676 31456 30476 34091 37756 56710 36273 44361 39666 26621 29491 41869 29309 28428 19788 42152 25357 19407 19453 29141 27946 34742 37516 56515 36944 44902 40039 28741 30311 41603 29490 30021 21029 41276 25122 18789 18539 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5029000 25992 2644;4322 24407 48739 39292 39292 1602;1603 1 9606 Homo sapiens 0.012358375176972913 SVNELIYK Unmodified 964.52295 0.52294707 3473;3341 P18124;A0A024R814;A8MUD9;O95036 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 no no 0 0 0 7.5 0.5 1 1 52.444 52.518 3 0.00047464 14694 20230619_1887_Aki_TMTPro18x_K_F7 138.78 60.015 536500 416790 493190 567310 547440 603680 558420 572070 619430 692700 648080 600210 789540 602550 566260 789140 778530 717260 495600 382860 505850 560840 564760 606890 564430 589760 629440 690750 669220 613970 790430 631680 592640 785310 742420 682240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2166600000 25993 3473;3341 24408 48740;48741 39293;39294 39293 2 9606 Homo sapiens 0.03926651694678185 SVNESLNNLFITEEDYQALR Unmodified 2354.139 0.13901926 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;J3KS13 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 3.5 0.5 1 1 63.209 63.227 3 3.1693E-37 19690 20230619_1883_Aki_TMTPro18x_K_F4 238.19 220.49 15304 15719 18813 18997 20922 28167 23024 24171 28106 23418 26484 23286 22664 20941 20409 25328 21320 25247 14200 14408 18862 19035 21658 27679 23250 24936 28258 23716 27055 23584 23155 21904 20874 25363 20417 23966 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194910000 25994 826 24409 48742;48743 39295 39295 1 9606 Homo sapiens 0.0161153131402898 SVNFDMTSK Unmodified 1027.4644 0.46444592 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B4DHD2;B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 7 0 1 50.005 50.087 2 0.00014528 13618 20230619_1887_Aki_TMTPro18x_K_F7 123.79 61.793 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25995 3981 24410 48744 39296 39296 1 9606 Homo sapiens -0.04818772942121541 SVNFSLTPNEIK Unmodified 1347.7034 0.70343063 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 4.5 3.5 1 1 57.208 57.234 3 4.0658E-11 16647 20230619_1888_Aki_TMTPro18x_K_F8 193.49 157.84 393250 318780 355960 410870 342350 366710 376700 388610 374010 457730 485400 507120 487580 439610 523230 508650 512030 567030 363320 292610 364780 406760 357520 374720 378000 397450 385970 460150 493200 510230 499340 459310 530750 513370 490400 537750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1240600000 25996 630 24411 48745;48746 39297;39298 39298 2 9606 Homo sapiens 0.04348705560846611 SVNSLDGLASVLYPGCDTLDK Unmodified 2223.0729 0.072913532 284 B3KN05;A0A7P0TA76;B2RBE0;A0A024R487;O95573;A0A7P0TBB1;A0A7P0TB52;A0A7P0T905;H7BYZ7;A0A7P0TBL9 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes no 0 0 0 7 0 1 64.021 64.051 3 4.1415E-23 19662 20230619_1887_Aki_TMTPro18x_K_F7 188.32 170.83 69009 56120 66331 62082 36079 50463 52311 54051 52491 73973 53416 52429 85526 60563 46949 103480 75675 75223 63788 51436 67123 62101 40389 51997 51877 55508 53655 73005 56122 54554 84386 64510 50319 101540 72124 71748 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115050000 25997 284 24412 48747 39299 39299 1 9606 Homo sapiens 0.010299991475676507 SVNVKPLVTHR Unmodified 1248.7303 0.73025451 3775 V9HW89;Q00796;B4DKI2 HEL-S-95n;SORD Sorbitol dehydrogenase yes no 0 0 1 5 0 1 38.85 38.942 4 0.00056158 9095 20230619_1885_Aki_TMTPro18x_K_F5 108.56 61.858 153560 117960 154760 166770 197620 217410 188340 165320 172340 161590 211540 146070 134490 100940 199040 101170 121150 66394 141950 108410 157830 164970 201540 214760 189940 172440 177900 163060 211500 147580 142540 105630 196410 100100 116290 63630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199150000 25998 3775 24413 48748 39300 39300 1 9606 Homo sapiens 0.11583858962694649 SVNYAAGLSPYADK Acetyl (Protein N-term) 1496.7147 0.7147236 4238 Q8N6T7-2;Q8N6T7;M0R0B2;B4DVV2;M0QXA0 SIRT6 NAD-dependent protein deacetylase sirtuin-6 yes no 1 0 0 5 0 1 59.81 59.862 2 9.1141E-05 17855 20230619_1885_Aki_TMTPro18x_K_F5 55.401 35.614 14678 11380 14298 13098 12055 13676 13295 12499 14629 16715 15172 13140 15131 13170 16373 17822 13695 14440 13565 10436 14513 13101 12737 13763 13381 12964 14864 16557 15530 13511 15501 13827 16489 17642 13135 13748 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14545000 25999 4238 24414 48749 39301 39301 1 9606 Homo sapiens -0.013765171356681094 SVPACQVPR Unmodified 1012.5124 0.51239916 3753 Q5VUC3;P78345 RPP38 Ribonuclease P protein subunit p38 yes no 0 0 0 7.5 0.5 1 1 36.286 36.313 2 0.00546 7841 20230619_1887_Aki_TMTPro18x_K_F7 93.374 65.156 20795 13668 20786 17795 22254 23794 23488 24832 34019 25430 24344 25238 27919 23478 17426 26422 32169 25123 19205 12559 21120 17720 23045 23627 23932 25297 33656 25682 25576 25567 27901 24432 18764 26407 30588 23902 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36858000 26000 3753 24415 48750;48751 39302 39302 1 9606 Homo sapiens 0.00664345768586827 SVPADLSRPK Unmodified 1068.5928 0.59275797 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;A0A024R2V0;P27816-4;Q86Y04;P27816-5;B5MEG9;H7C4C5;H0Y2V1;B4DSQ1 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 1 6.5 1.5 1 1 39.668 39.707 3 0.004523 9395 20230619_1888_Aki_TMTPro18x_K_F8 74.53 50.148 150280 99975 164120 150870 213740 199520 170260 208720 207380 137650 224250 263390 197200 185130 220300 144640 267240 240600 138900 92009 166170 148820 216650 198270 175490 210590 209510 146760 228410 258870 203380 191360 225750 151640 255060 227600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166060000 26001 2902 24416 48752;48753 39303 39303 1 9606 Homo sapiens 0.061205303632732466 SVPAFIDISEEDQAAELR Acetyl (Protein N-term) 2030.9797 0.97966507 4152 Q7L2H7;E7ESM3;B4DT09;E9PRI2 EIF3M Eukaryotic translation initiation factor 3 subunit M yes no 1 0 0 1 0 1 65.291 65.291 2 4.0399000000000005E-30 20607 20230619_1880_Aki_TMTPro18x_K_F1 237.13 224.12 1456.4 1182.6 1520.5 2452.6 1434.1 1262.4 0 1630.1 853.74 2534.4 2448.6 4849.7 3848.8 2895.2 2135.6 2892.3 4054.6 5578.9 1347.1 1092.4 1541.1 2353.5 1458.1 1374.7 0 1663 895.1 2577.1 2512.1 4740.9 3800.7 3055.1 2312 3053.7 3871.4 5264.8 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 136070000 26002 4152 24417 48754 39304 39304 1 9606 Homo sapiens 0.005414427566847735 SVPDEIILLR Unmodified 1153.6707 0.67067394 1188 A0A140VJN3;Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes no 0 0 0 5.5 0.5 1 1 59.764 59.821 2 5.9786E-07 17809 20230619_1885_Aki_TMTPro18x_K_F5 185.58 104.39 70512 61084 65251 65156 63644 79792 70106 70944 76390 83662 79141 69471 77861 68401 76898 91170 77961 81843 65184 55955 66707 65687 66498 79373 70531 73404 77629 83438 80959 71187 79474 71790 78354 90687 74609 77819 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135490000 26003 1188 24418 48755;48756 39305 39305 1 9606 Homo sapiens 0.09998543228653034 SVPEDDGHALLAER Unmodified 1507.7267 0.72668527 3790 Q02952-3;Q02952-2;Q02952 AKAP12 A-kinase anchor protein 12 yes no 0 0 0 2 0 1 42.088 42.168 3 1.8643E-07 10852 20230619_1881_Aki_TMTPro18x_K_F2 113.52 103.53 194300 142480 192370 203540 191000 227250 200390 216690 228190 214580 255360 258720 238580 224110 201720 250390 270350 293610 179530 130990 195630 200790 198910 227640 202490 222030 231880 218330 259950 259520 242470 233650 209840 253470 258160 278330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160080000 26004 3790 24419 48757 39306 39306 1 9606 Homo sapiens -0.006869003924975914 SVPENLLK Unmodified 898.51238 0.51238239 71 A0A024QZY1;Q13155;B2R7M3;Q13155-2;A8MU58 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes no 0 0 0 7.5 0.5 1 1 50.966 51.043 2 0.016807 13957 20230619_1887_Aki_TMTPro18x_K_F7 99.442 49.402 78053 69989 76572 86602 87906 88706 92436 93587 101670 101060 98462 91757 105290 81716 101050 102880 101900 90960 72205 64194 78133 86124 90468 89678 93228 95463 102970 101440 101440 93260 106980 85771 102880 102380 97417 86561 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 373950000 26005 71 24420 48758;48759 39307 39307 1 9606 Homo sapiens 0.059066690402460154 SVPHEEYR Unmodified 1015.4723 0.47230849 923 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;Q9Y655;A0A087WUT0;A0A024R5Q6;H0YN19 MYEF2 Myelin expression factor 2 yes no 0 0 0 2.5 0.5 1 1 30.192 30.273 3 2.1598E-05 5684 20230619_1882_Aki_TMTPro18x_K_F3 168.27 115.78 74607 57062 77922 81723 66586 71520 75167 75615 78988 88555 99676 104630 103730 92505 88612 83940 126100 102510 68984 52451 78723 80360 70258 73182 75470 77347 81110 89264 101500 105020 105080 95368 92398 85563 120130 97250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253840000 26006 923 24421 48760;48761 39308;39309 39309 2 9606 Homo sapiens -0.0348087763032936 SVPHLQK Unmodified 807.46029 0.46028724 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;A6NMY6;H0YMU9;H0YL33;H0YM50;B3KRQ1;H0YN28;H0YNP5 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 3.6 2.42 1 1 1 1 1 38.642 38.671 3 0.001735 9143 20230619_1881_Aki_TMTPro18x_K_F2 129.4 92.377 1569600 978930 1290200 1457600 2082900 2012700 1696300 1640800 2160700 1803500 2117600 2198200 1983600 1805500 1916400 1554600 2351600 2026100 1447100 901070 1346400 1438900 2089700 1984800 1746500 1706300 2172400 1827000 2169300 2198800 2026700 1862000 1971700 1594200 2243600 1920600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3135899999.9999995 26007 368 24422 48762;48763;48764;48765;48766 39310;39311;39312;39313 39311 4 9606 Homo sapiens 0.04885550417145623 SVPHYAAIEPDGNGLMIVSYK Unmodified 2260.1198 0.11980414 4394 Q96RS6;Q96RS6-3;Q96RS6-2;A0A7I2V457 NUDCD1 NudC domain-containing protein 1 yes no 0 0 0 8 0 1 59.272 59.314 3 6.6346E-08 17515 20230619_1888_Aki_TMTPro18x_K_F8 101.49 92.492 21538 18362 21027 21975 18724 25156 18672 21623 20840 28247 28360 30211 31032 24636 26164 30490 29250 34758 19917 16839 21375 21937 19670 25107 18923 22504 21445 28236 28869 30382 31341 25922 26887 30769 27995 32948 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7989900 26008 4394 24423 48767 39314 39314 1 9606 Homo sapiens 0.04014903489314747 SVPLAATSMLITQGLISK Unmodified 1829.0332 0.033220969 593 A0A024R9U3;Q9NX40;D6R918;D6RBC5;D6RDI5;D6RA54;D6RC55;D6RG39;D6RIT9;Q9NX40-3;Q9NX40-2;Q9NX40-4 OCIAD1 OCIA domain-containing protein 1 yes no 0 0 0 5.5 0.5 1 1 64.722 64.766 3 2.5965E-14 20240 20230619_1886_Aki_TMTPro18x_K_F6 165.45 141.85 63780 52704 59381 73783 63089 86232 78162 74487 83923 73629 91763 101950 79134 70551 85887 94995 102450 122050 58946 48418 60862 72893 65777 85916 78102 76918 85402 75322 93316 101150 81529 75110 88190 96536 98000 115570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 484370000 26009 593 24424 48768;48769 39315 39315 1 9606 Homo sapiens 0.15186568725425786 SVPLATAPMAEQR Unmodified 1369.7024 0.70238478 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 6.67 0.471 1 2 46.462 46.548 2;3 9.0732E-06 12417 20230619_1886_Aki_TMTPro18x_K_F6 165.63 109.51 40825 34263 37728 40947 41912 51973 46472 41488 53867 47816 53094 51312 54111 39951 48360 61646 59187 51267 37732 31423 38677 40940 43385 51467 46806 43291 54406 48112 54540 51584 54893 42739 49946 60978 56470 48832 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97000000 26010 4753 24425 48770;48771;48772 39316;39317 39316 2 9606 Homo sapiens 0.032321679203050735 SVPQSGPTVRPQEDAWASPGAYGMGGR Unmodified 2757.2929 0.29291092 2279 B2RA34;O95429-2;O95429;H0YBT1 BAG4 BAG family molecular chaperone regulator 4 yes no 0 0 1 8 0 1 49.923 49.995 3 0.00011666 13510 20230619_1888_Aki_TMTPro18x_K_F8 81.949 75.179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26011 2279 24426 48773 39318 39318 1 9606 Homo sapiens -0.01544382192150806 SVPSETVVEDSR Unmodified 1303.6256 0.62557424 275;1599 A0A024R3Z1;Q6NYC5;A0A669KB77;P11137-3;P11137 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 0 1.5 0.5 1 1 40.752 40.789 2 1.0509E-12 10158 20230619_1881_Aki_TMTPro18x_K_F2 203.52 161.21 113740 115130 101270 124500 92182 89166 130870 158630 151320 153310 169150 158550 167180 129640 155500 165580 183360 159260 105230 105430 103920 124600 97444 94513 130420 157030 153670 155260 172540 159810 170070 136630 159910 165440 175000 151420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135370000 26012 275;1599 24427 48774;48775 39319;39320 39320 2 9606 Homo sapiens -0.014093520951746541 SVPTSTVFYPSDGVATEK Unmodified 1883.9153 0.9152739 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8;B4DVU1 HEL107;TKT Transketolase yes no 0 0 0 6.5 0.5 1 1 55.483 55.552 3 4.783E-19 15957 20230619_1887_Aki_TMTPro18x_K_F7 187 170.34 275100 241930 273040 300290 240890 300210 278010 272470 572300 393630 374050 362640 462160 393810 357180 461550 425350 437430 254480 221920 277250 298430 254650 302900 287050 283560 557970 391030 396650 370720 464060 408800 369390 461080 406390 415680 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1041599999.9999999 26013 3523 24428 48776;48777 39321;39322;39323;39324 39324 4 9606 Homo sapiens 0.008672876704395094 SVPTWLK Unmodified 829.46979 0.46978929 3712 P62277;J3KMX5;E9PS50 RPS13 40S ribosomal protein S13 yes no 0 0 0 3 0.816 1 1 1 54.754 54.781 2 0.0072992 16523 20230619_1881_Aki_TMTPro18x_K_F2 134.06 59.314 932830 799310 888430 929440 935120 1113900 1081200 1091200 1234800 828780 796680 649700 765820 641270 929230 806690 792880 682880 862480 732800 907350 930580 972370 1111600 1086100 1109100 1230500 846980 836160 668260 790360 670570 933790 801560 759180 650320 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1510199999.9999998 26014 3712 24429 48778;48779;48780 39325;39326;39327;39328 39325 4 9606 Homo sapiens 0.04823318702665347 SVPVTVDDDDDDNDPENR Unmodified 2015.8192 0.81920127 1951 P46100;P46100-4;P46100-3;P46100-5;P46100-2;A4LAA3;P46100-6;A0A096LNL9;B7Z1D8;A0A096LP59 ATRX Transcriptional regulator ATRX yes no 0 0 0 1 0 1 44.257 44.257 3 2.5129000000000003E-30 11998 20230619_1880_Aki_TMTPro18x_K_F1 226.25 222.28 11774 5336.4 14736 12697 11923 14376 9498.1 14658 18312 15046 15587 18590 16968 16274 15776 20655 21301 16485 10880 4956.5 14664 12232 12564 14398 10013 14951 18043 15299 16197 18633 17239 17075 16393 20441 20294 15720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48025000 26015 1951 24430 48781 39329 39329 1 9606 Homo sapiens -0.1480755669822429 SVQAGNPGGPGPGGR Unmodified 1306.6378 0.63781068 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q59FU3;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 6.25 0.829 1 1 2 32.554 32.625 2;3 3.0729E-18 6744 20230619_1886_Aki_TMTPro18x_K_F6 201.46 182.19 12659 6740.7 14334 11726 10538 13715 11371 10235 12343 10839 12622 8522 12829 11811 8383 6938.9 14040 11249 11693 6222.3 14349 11454 11281 13626 11457 10717 12524 10864 12912 8873.8 12885 11824 8904.3 7300.1 13360 10649 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31982000 26016 2644;4322 24431 48782;48783;48784;48785 39330;39331 39330 2 9606 Homo sapiens -0.0032427084149730945 SVQANLDQSQR Unmodified 1244.6109 0.61092723 1616 Q27J81;Q27J81-2;A0A6Q8PHA2;A0A6Q8PH71;A0A6Q8PHG2;A0A6Q8PGN3;A0A6Q8PF44;A0A6Q8PH25;A0A6Q8PF29;A0A087X118;A0A6Q8PGC7;A0A6Q8PH63;A0A6Q8PGU8;A0A6Q8PH59;A0A6Q8PFN5;A0A6Q8PFB9;A0A6Q8PGY8;A0A6Q8PH52;A0A6Q8PGK9 INF2 Inverted formin-2 yes no 0 0 0 4 0 1 35.833 35.881 2 7.9336E-12 7877 20230619_1883_Aki_TMTPro18x_K_F4 235.06 202.43 45876 32215 47886 53872 64942 60838 48037 54779 61750 56561 76972 78870 78985 65974 64800 43970 88013 76345 42398 29680 48745 52673 65587 60851 49880 56426 62722 57755 78335 78557 79871 67359 67294 46432 83905 72213 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55140000 26017 1616 24432 48786 39332 39332 1 9606 Homo sapiens -0.0015937945267978648 SVQPQSHKPQPTR Unmodified 1488.7797 0.77972389 4130 Q6PKG0;Q6PKG0-3;A0A0B4J210 LARP1 La-related protein 1 yes no 0 0 1 2 0 1 29.316 29.388 4 1.2144E-05 5492 20230619_1881_Aki_TMTPro18x_K_F2 126.09 106.08 16644 12358 19176 23896 26889 23825 23087 23843 22848 21100 27619 27015 20221 18754 21196 15902 24037 27259 15401 11407 19407 23157 27158 24094 23498 24290 23467 21643 27786 26863 20927 19474 21665 16679 22993 25759 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12200000 26018 4130 24433 48787 39333 39333 1 9606 Homo sapiens 0.05488522180826294 SVQPTSEER Unmodified 1031.4884 0.48835248 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;A0A0S2Z5W9;Q9UHD8-4;Q9UHD8-8;Q9UHD8-9;A0A6Q8PHC2;K7EL40;K7EK18;K7ER14;K7ER52;K7EIE4;K7EQD7;K7EJZ2;K7ENQ5;K7EN52;K7EKN4 SEPT9 Septin-9 yes no 0 0 0 1.5 0.5 1 1 29.407 29.443 2 3.4666E-06 5785 20230619_1880_Aki_TMTPro18x_K_F1 187.22 130.04 45661 17163 52738 52992 66163 68196 56907 74823 56793 44384 79262 88863 63466 67378 73850 24147 82504 80306 42133 16054 53179 50712 67344 67878 57990 75122 58662 47815 79663 87369 65846 67916 75105 28280 78841 75688 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 63674000 26019 541 24434 48788;48789 39334;39335 39334 2 9606 Homo sapiens -0.02613216184090561 SVQSQGFK Unmodified 879.44503 0.4450311 3553 P36405 ARL3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 8 0 1 40.396 40.388 2 0.00021382 9643 20230619_1888_Aki_TMTPro18x_K_F8 182.53 122.38 105910 65047 127100 132760 154180 176300 132730 148570 136490 100020 141580 158520 133080 119910 151610 62564 163890 138730 97942 60145 127790 128930 157400 174170 135280 152380 138900 105500 144830 156800 137020 121980 153990 68373 156510 131050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66583000 26020 3553 24435 48790 39336 39336 1 9606 Homo sapiens 0.00048638829287028784 SVQTFADK Unmodified 894.4447 0.44469675 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;Q7L4N0 CAPZB F-actin-capping protein subunit beta yes no 0 0 0 6.5 0.5 1 1 44.724 44.811 2 0.0011553 11601 20230619_1886_Aki_TMTPro18x_K_F6 158.76 103.04 792300 538190 668580 748970 749400 808840 786930 793440 1010900 991290 1077600 1036400 1164800 909990 909950 933730 1268900 1139600 730890 494790 691130 739630 773550 812920 798240 816890 1019900 992720 1105600 1045600 1173600 944870 949590 949450 1209700 1080700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1240000000 26021 1434 24436 48791;48792 39337 39337 1 9606 Homo sapiens -0.006747808905743113 SVQTTLQTDEVK Unmodified 1347.6882 0.6881745 1421;2318 E5RHW4;A0A384ME54;O94905;O94905-2;O94905-3;B2RDK6;O75477;B0QZ43 ERLIN2;ERLIN1 Erlin-2;Erlin-1 no no 0 0 0 4 0 1 46.298 46.341 2 7.028E-51 12342 20230619_1883_Aki_TMTPro18x_K_F4 321.71 227.44 52549 46865 51734 55651 64249 74340 73742 69794 84249 62631 82138 91331 81148 68629 77436 83653 82588 88587 48611 42968 52853 55727 66031 73638 74094 71434 85043 64584 84396 90654 82675 72316 79129 84084 79011 84066 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64431000 26022 1421;2318 24437 48793 39338 39338 1 9606 Homo sapiens 0.028237939729933714 SVQVSTLK Unmodified 860.49673 0.49673232 4304 V9HVZ6;Q92747;Q53GB6;A0A0K0K1L3;Q59GQ0;A0A1W2PNV4;Q92747-2;E9PF58 HEL-68;ARPC1A Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 1.5 0.5 1 1 44.836 44.836 2 0.00062399 12218 20230619_1880_Aki_TMTPro18x_K_F1 172.94 64.701 144830 94984 136390 179330 258650 268340 199520 185530 238170 171330 207860 200360 196000 168190 168400 143470 229540 211250 133690 87691 141340 175030 257340 262570 205650 194900 239070 175010 214080 200930 199180 173340 174940 148460 218900 200000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121960000 26023 4304 24438 48794;48795 39339;39340 39339 2 9606 Homo sapiens 0.06090382523188964 SVQYDDVPEYK Unmodified 1341.6089 0.60886155 3867 Q13740-2;F5GXJ9;Q13740;B3KNN9;B4DX43;Q13740-3 ALCAM CD166 antigen yes no 0 0 0 3.5 0.5 1 1 48.975 49.033 3 2.4823E-05 13532 20230619_1883_Aki_TMTPro18x_K_F4 118.28 104.31 297410 250720 250930 291870 463750 528930 448270 421470 550900 462440 399100 401250 592490 406060 339390 651890 523700 531400 274700 229880 262360 294360 464810 514320 455550 438810 549580 463690 424800 410770 586140 432050 361470 643360 499340 505980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 757640000 26024 3867 24439 48796;48797 39341;39342 39342 2 9606 Homo sapiens -0.04827852981156866 SVSAADIER Unmodified 946.47197 0.47197413 2111 A8K7S5;O75449 KATNA1 Katanin p60 ATPase-containing subunit A1 yes no 0 0 0 2 0 1 38.514 38.577 2 0.051 9165 20230619_1881_Aki_TMTPro18x_K_F2 67.081 11.172 50438 61976 65543 63051 55308 92294 64388 59288 74980 67315 66041 61376 65747 56579 84119 61097 106700 70863 46900 56690 65196 63978 58721 90299 64733 63068 75415 67478 68183 62410 68032 58785 86310 61947 101620 67334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24054000 26025 2111 24440 48798 39343 39343 1 9606 Homo sapiens -0.0034029735018066276 SVSAFAPICNPVLCPWGK Unmodified 2001.9805 0.98047389 1178 X6RA14;U3KQT1;A0A140VJJ2;P10768;H7BZT7 ESD S-formylglutathione hydrolase yes no 0 0 0 5.5 0.5 1 1 63.58 63.627 3 1.6867E-09 19574 20230619_1885_Aki_TMTPro18x_K_F5 128.9 118.41 252700 207540 285790 286280 193110 235410 272800 259070 248520 316720 311270 314750 347010 294870 321480 311060 349180 413180 233920 190640 286200 282000 210010 242370 269890 264720 257340 316770 318060 318840 351780 305890 328840 318060 334270 391120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 812930000 26026 1178 24441 48799;48800 39344;39345 39344 2 9606 Homo sapiens 0.019562873909762857 SVSDNDIR Unmodified 904.42502 0.42502394 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;Q96IF9;Q0IIN5;Q9NTC4;A0A7P0TA22 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 1.5 0.5 1 1 33.14 33.169 2 0.010318 6936 20230619_1881_Aki_TMTPro18x_K_F2 99.136 57.908 85071 42806 106210 121580 199330 187670 118670 160090 137150 95088 164030 181560 127170 128140 160590 63437 167310 158190 78635 39879 107570 116960 197230 184010 125030 163590 139580 102230 165590 178430 132660 130500 162530 70433 159960 149280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132020000 26027 3656 24442 48801;48802 39346 39346 1 9606 Homo sapiens -0.031011569013344342 SVSDQFYR Unmodified 1000.4614 0.46140945 406 A0A024R6Q1;P55010;Q6IBU0;H0YLZ1;Q32Q19;Q05DF3;H0YN40;H0YMJ8;H0YM54;H0YK29;H0YK11 EIF5 Eukaryotic translation initiation factor 5 yes no 0 0 0 5.5 0.5 1 1 42.071 42.16 2 3.7428E-06 10408 20230619_1886_Aki_TMTPro18x_K_F6 193.96 166.44 394810 291860 354010 363400 426690 481200 451620 434570 502600 452440 523930 590060 496710 425820 494070 554730 609780 580860 364540 267910 364210 362660 438320 476530 455430 447670 509770 460490 535860 587100 507840 451370 509160 556660 582110 551530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 471490000 26028 406 24443 48803;48804 39347;39348 39348 2 9606 Homo sapiens -0.03880280004614178 SVSFSDVFFK Unmodified 1161.5706 0.57062555 279 A0A024R413;O43676 NDUFB3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 yes no 0 0 0 2 0 1 62.74 62.749 3 0.00014096 19866 20230619_1881_Aki_TMTPro18x_K_F2 105.98 88.949 68527 55472 67182 73668 69228 67003 80038 78533 83592 70410 77502 64022 65230 55388 71173 72387 80276 61088 63351 50935 68422 72819 71949 68539 80184 79230 84654 71401 79194 65062 67261 58306 72772 71842 76586 58211 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68187000 26029 279 24444 48805 39349 39349 1 9606 Homo sapiens -0.0036969410516576318 SVSGTDVQEECR Unmodified 1365.5831 0.5830575 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;Q6PJY7;E9PPR5 NASP Nuclear autoantigenic sperm protein yes no 0 0 0 1 0 1 34.252 34.252 2 6.2865999999999995E-52 7667 20230619_1880_Aki_TMTPro18x_K_F1 338.56 319.29 86371 32248 86376 100450 130130 167090 101960 110520 115730 83676 127890 152960 138620 122230 120320 56795 151080 141880 79594 30172 88509 96488 131150 162370 104890 116080 117490 88203 131280 150900 140290 123700 123990 63122 144190 133890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153200000 26030 3605 24445 48806 39350 39350 1 9606 Homo sapiens -0.08511070495069362 SVSIPAPAYYAHLVAFR Unmodified 1860.9887 0.98865404 1948 A4FVC0;Q9UKV8-2;Q9UKV8 EIF2C2;AGO2 Protein argonaute;Protein argonaute-2 no no 0 0 0 6 0 1 61.21 61.264 3 2.6437E-09 18668 20230619_1886_Aki_TMTPro18x_K_F6 131.72 117.49 84345 85767 104150 99286 101380 105170 105710 102290 95661 114380 119460 116760 123830 103280 115320 124800 123250 129840 78261 78582 104070 99276 105480 105880 106090 105030 99071 114970 121640 117990 125810 108150 117910 125320 117900 123250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41233000 26031 1948 24446 48807 39351 39351 1 9606 Homo sapiens 0.09259925694254889 SVSLTGAPESVQK Unmodified 1301.6827 0.68269519 3197 M0R0C6;Q92945;A0A384P5V3;M0R0I5;M0QYH3;M0QXW7 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 6.33 0.471 2 1 47.494 47.579 2;3 3.068E-26 12827 20230619_1886_Aki_TMTPro18x_K_F6 257.42 185.97 296830 195220 278390 328970 297670 350430 327820 341810 386610 339120 410560 398970 444120 362330 302510 440450 412650 460530 274000 179930 284970 321260 308750 352260 330670 349750 391270 344780 421290 401350 445440 379160 316960 442050 394090 437030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1863399999.9999998 26032 3197 24447 48808;48809;48810 39352;39353 39352 2 9606 Homo sapiens 0.04392115181167355 SVSLVGEDERK Unmodified 1217.6252 0.62518031 2338 B7Z6D5;B3GQE6;Q96GQ7;Q53G15 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 0 1 3.5 0.5 1 1 40.796 40.847 3 0.0021047 9983 20230619_1882_Aki_TMTPro18x_K_F3 82.912 57.695 59539 48603 67638 66797 143410 126310 90952 98089 102300 69571 89274 95418 74324 70225 88556 70544 98965 92344 55115 44644 69128 66704 141290 122610 95081 101330 103000 72684 91629 94826 77074 73267 90269 72169 94543 87502 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 337460000 26033 2338 24448 48811;48812 39354 39354 1 9606 Homo sapiens 0.02507272975617525 SVSQDLIK Unmodified 888.49165 0.49164694 2848 Q9UPQ0-10;Q9UPQ0;D6RD46;Q9UPQ0-2;Q9UPQ0-4;G5EA03;E9PDJ9;B7Z2J4;E7EPK0;Q9UPQ0-3;Q9UPQ0-8;Q9UPQ0-5;Q9UPQ0-6;H0Y8P3;Q9UPQ0-9;B7Z5Q8;B7Z3F1;B7Z3G0;B7Z5G6;B7Z656;Q6N054 LIMCH1;DKFZp686G03277 LIM and calponin homology domains-containing protein 1 yes no 0 0 0 6 0 1 47.303 47.384 2 0.0031194 12759 20230619_1886_Aki_TMTPro18x_K_F6 133.98 79.428 116200 78925 100300 90376 119900 143180 115170 110480 141310 94714 106550 103830 95055 76815 123170 89388 100990 97010 107210 72415 103450 91041 123030 140000 117170 114680 140940 96950 110490 104080 98677 80817 123340 90168 96812 92074 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53563000 26034 2848 24449 48813 39355 39355 1 9606 Homo sapiens 0.042940786605640824 SVSQETFR Unmodified 952.46141 0.46140945 1832 B4DDV7;A0A8V8TMY5;Q75N03-2;Q75N03;C9J2P9 CBLL1 E3 ubiquitin-protein ligase Hakai yes no 0 0 0 4 0 1 36.861 36.905 2 0.0012794 8282 20230619_1883_Aki_TMTPro18x_K_F4 119.21 93.102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26035 1832 24450 48814 39356 39356 1 9606 Homo sapiens -0.01672280004629556 SVSQGFCFNILCVGETGLGK Unmodified 2172.0344 0.034359956 3875 Q14141;Q541S4;Q548C9;B1AMS2;Q6B514;B4DZW0;Q8NFH9;Q14141-2;Q14141-4;B4DPT4;Q6NT82;Q8NFI2;Q8NFI0;Q14141-3;Q8NFI1 SEPT6 Septin-6 yes no 0 0 0 3 0 1 64.172 64.204 3 0.014152 20239 20230619_1882_Aki_TMTPro18x_K_F3 50.255 34.133 11502 8015.1 10175 9563.5 9756.4 12866 9883.8 11147 12598 12721 12200 12302 14434 12264 13046 14127 13353 14175 10616 7356.1 10438 9576.5 10196 12715 10049 11541 12672 12762 12635 12507 14594 12752 13313 14167 12779 13460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23350000 26036 3875 24451 48815 39357 39357 1 9606 Homo sapiens -0.004775849680299871 SVSSNVASVSPIPAGSK Unmodified 1585.8312 0.83115034 4757 Q9Y6G9;B3KM42;E9PHI6;B4DDM4 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 yes no 0 0 0 1.5 0.5 1 1 49.182 49.215 3 0.016607 14039 20230619_1880_Aki_TMTPro18x_K_F1 55.267 40.001 30000 24607 25353 31687 26994 36841 31655 34119 35508 40265 35945 40636 42418 32723 37019 42119 42843 41734 27705 22586 26215 31473 28104 36778 31772 35197 36013 40361 37175 40947 42813 34529 38086 42139 40928 39647 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274250000 26037 4757 24452 48816;48817 39358 39358 1 9606 Homo sapiens 0.06166801364247476 SVSSSLSDAR Unmodified 1007.4884 0.48835248 2588 B4E2E1;B4DTM6;O95487-2;O95487;O95487-3 SEC24B Protein transport protein Sec24B yes no 0 0 0 4 0 1 36.044 36.09 2 7.447E-07 7969 20230619_1883_Aki_TMTPro18x_K_F4 183.43 127.99 30535 18827 27430 32071 34094 34510 35635 34462 42349 38593 41804 45441 49101 41801 34383 47710 58767 59921 28167 17360 28250 31308 34917 34699 36039 35328 42740 39002 43242 45696 49211 43570 36639 48486 56000 56779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37613000 26038 2588 24453 48818 39359 39359 1 9606 Homo sapiens -0.015092161841039342 SVSSSSYR Unmodified 871.40356 0.40356022 3414 P08670;V9HWE1;Q53HU8;B0YJC4;A0A1B0GTT5;A0A1B0GVG8;A0A0S2Z4T0 VIM;HEL113 Vimentin yes no 0 0 0 5.75 1.56 1 1 1 2 2 1 30.059 30.124 2 0.00021493 5735 20230619_1885_Aki_TMTPro18x_K_F5 169.06 147.91 46640 21063 64528 48973 209380 219910 105450 133040 104710 17398 32832 33439 27192 24627 75833 11181 43598 25822 43143 19556 66135 49274 203090 207290 112280 138560 103700 24464 36947 32997 30263 24985 74106 12487 41903 24436 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 503720000 26039 3414 24454 48819;48820;48821;48822;48823;48824;48825;48826 39360;39361;39362;39363 39361 4 9606 Homo sapiens -0.03728541930047413 SVSSVLSSLTPAK Unmodified 1274.7082 0.70818166 2900;4026 E7ESY4;Q13330-3;Q13330;A0A024R6P5;H0Y4T7;F8W9Y9;Q59FW1;Q9BRL8 MTA1 Metastasis-associated protein MTA1 no no 0 0 0 4 0 1 60.98 60.984 3 9.1749E-12 18694 20230619_1883_Aki_TMTPro18x_K_F4 191.79 160.91 61263 51694 59482 66160 52934 64265 62592 69306 68018 69177 70134 61688 72873 62874 74526 74706 72685 69848 56645 47440 60520 65602 55809 65225 62758 70435 69085 69684 71939 63055 74366 65442 75652 74618 69543 66404 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 382890000 26040 2900;4026 24455 48827 39364 39364 1 9606 Homo sapiens 0.08181589703622194 SVSTPSEAGSQDSGDGAVGSR Unmodified 1949.8563 0.85625547 3849 Q13409-2;Q13409-3;Q13409-6;Q13409;Q13409-5;Q13409-7;A0A140VKE9;B4DPZ3;Q59GU5;E7EQL5;E7EV09;E7EQU2;E7EMU4;E7ESD3;E7ETL8;E9PGG1;E7ET01;E7ERH4;E7ERR6;E7EUM4 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 0 1.5 0.5 1 1 36.266 36.295 3 2.811E-55 8158 20230619_1881_Aki_TMTPro18x_K_F2 279.27 256.13 24387 18804 26377 26884 31040 36210 30806 35542 37774 33147 40503 40516 33409 33834 34128 32007 42628 40917 22557 17284 26706 26603 31885 35874 31305 36270 38169 33855 41117 40564 34400 35009 35147 32703 40692 38775 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 260130000 26041 3849 24456 48828;48829 39365;39366 39366 2 9606 Homo sapiens -0.08067840361832168 SVSTTGSLQR Unmodified 1034.5356 0.53563702 1818 Q7Z460;Q7Z460-3;Q7Z460-5;Q7Z460-4;Q7Z460-2;A0A8V8TLP7;F8WA11;A0A8V8TQK9;A0A8V8TRF6;H0Y5T1;B7Z4E5;B7Z7Q8;B7Z5R7 CLASP1 CLIP-associating protein 1 yes no 0 0 0 7 0.816 1 1 1 33.913 33.954 2 1.2578E-06 6883 20230619_1887_Aki_TMTPro18x_K_F7 175.91 124.34 41507 23320 49552 52312 55019 61589 47074 52318 47316 41558 54873 58152 48475 45581 70219 28485 69427 54187 38367 21608 49760 50504 56481 61302 47979 53803 48467 43082 55738 57804 50736 46538 70733 30481 66329 51251 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39488000 26042 1818 24457 48830;48831;48832 39367;39368 39367 2 9606 Homo sapiens 0.0197506308688844 SVTADRWEK Unmodified 1090.5407 0.5407224 4397 Q96T23-2;Q96T23;H0YER1;Q05DG0;H7C306 RSF1 Remodeling and spacing factor 1 yes no 0 0 1 6 0 1 40.289 40.382 3 0.00047268 9674 20230619_1886_Aki_TMTPro18x_K_F6 117.71 92.851 115190 97545 120580 118180 139580 155310 144570 141520 166720 131690 136800 122730 140240 111450 133280 126410 146310 114600 106580 89468 122330 118160 143630 153900 146130 145230 167310 133420 141830 124670 142660 116160 136320 126180 139640 109090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98038000 26043 4397 24458 48833 39369 39369 1 9606 Homo sapiens -0.0009263305048534676 SVTAFFK Unmodified 798.42759 0.42759012 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 3.5 0.5 1 1 56.482 56.503 2 0.0037147 16864 20230619_1883_Aki_TMTPro18x_K_F4 153.15 86.155 657530 547070 609640 595660 546060 670910 651560 605380 718560 635900 594590 502960 626250 462300 602120 668820 648340 545900 607700 501300 622320 598840 575730 671250 652900 623880 723210 637220 616750 515740 636640 489410 615580 661720 619170 520180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342850000 26044 1676;2901 24459 48834;48835 39370;39371 39371 2 9606 Homo sapiens 0.020313432942771215 SVTDCTSNFCLFQSNSK Unmodified 1993.851 0.85097586 2791 CON__Q0IIK2;CON__Q29443 yes no 0 0 0 1 0 1 57.556 57.556 3 4.3065E-07 17494 20230619_1880_Aki_TMTPro18x_K_F1 124.25 106.11 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26045 2791 24460 48836 39372 39372 1 -0.10619558749590396 SVTDSIRDEYAFLQK Unmodified 1770.8788 0.87882882 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;O00429-7;H0YI79;A0A994J6A0;A0A994J3G1;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 1 6.5 0.5 1 1 58.655 58.713 3 7.9823E-11 17289 20230619_1887_Aki_TMTPro18x_K_F7 162.69 143.11 324690 278920 302810 466770 342950 398740 411630 402010 431060 395140 390960 417030 461020 392250 410580 503610 447490 464000 300160 256780 311100 454510 355030 408130 411540 410560 436460 400430 406310 421690 465960 411250 420950 501810 427910 441070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1449800000 26046 3212;3213 24461 48837;48838 39373 39373 1 9606 Homo sapiens 0.02422455564419579 SVTEQGAELSNEER Unmodified 1547.7063 0.70634376 2805 D0PNI1;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1;Q6LD62 YWHAZ;14-3-3 protein 14-3-3 protein zeta/delta yes no 0 0 0 1.33 0.471 2 1 38.819 38.841 2 1.7644E-83 9344 20230619_1881_Aki_TMTPro18x_K_F2 369.07 338.51 142790 110500 109700 119870 115100 124350 124160 110070 135190 153560 173900 157770 175870 145530 152250 188950 209970 178250 131730 101280 114320 120380 119440 125150 125020 114660 138700 152990 176560 159680 178330 152820 158600 188470 200120 169530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 8810600000 26047 2805 24462 48839;48840;48841 39374;39375;39376 39376 3 9606 Homo sapiens -0.045601158429462885 SVTLLIK Unmodified 772.50584 0.50584045 765;2549 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2;B4DN39 CCT6A T-complex protein 1 subunit zeta no no 0 0 0 3 0.816 1 1 1 55.653 55.677 2 0.0023267 16596 20230619_1882_Aki_TMTPro18x_K_F3 162.51 48.491 1013900 887460 892330 995760 926080 1141300 1047800 981480 1283400 976690 941770 862100 990970 807670 1005000 1066300 955480 912440 937010 813280 917880 998670 964100 1139300 1056300 1013800 1279700 984730 984150 879140 1010400 848670 1019300 1058700 914380 868430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 823280000 26048 765;2549 24463 48842;48843;48844 39377;39378 39377 2 9606 Homo sapiens 0.11048775879510231 SVTTEPSSLK Unmodified 1047.5448 0.54480473 3006 Q6PJT7;Q6PJT7-5;G3V256;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-10;Q6PJT7-11;Q6PJT7-4;A0A3B3IT62;G3V572;G3V3Y4;G3V3R9;G3V240;G3V473 ZC3H14 Zinc finger CCCH domain-containing protein 14 yes no 0 0 0 6 0 1 42.926 43.02 2 8.765899999999999E-19 10781 20230619_1886_Aki_TMTPro18x_K_F6 206.43 131.22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26049 3006 24464 48845 39379 39379 1 9606 Homo sapiens 0.022934116525675563 SVTWPEEGK Unmodified 1031.4924 0.49237523 3960 Q96QC0;Q2L6I0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes no 0 0 0 4 0 1 48.73 48.768 3 0.04469 13451 20230619_1883_Aki_TMTPro18x_K_F4 41.117 25.527 97009 79117 103260 99766 97828 106410 102470 102010 133690 111040 114850 115200 128010 98664 115260 126190 119830 111740 89748 72605 104260 99163 102190 107010 104030 104770 133630 111920 119290 116220 129560 103800 117740 125540 114550 106320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26374000 26050 3960 24465 48846 39380 39380 1 9606 Homo sapiens -0.022111266903721116 SVVALHNLINNK Unmodified 1320.7514 0.75138388 2310 B2RD27;P51665;B4DXI8 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes no 0 0 0 4 0 1 51.591 51.619 3 5.4221E-11 14734 20230619_1883_Aki_TMTPro18x_K_F4 193.22 167.28 104060 66465 85638 119970 105040 143530 115940 119500 149640 120620 118570 132100 137250 117690 101710 147300 141180 165270 95950 61328 89071 116900 108180 142630 117260 123770 149250 122280 123980 133100 137860 123460 106490 148400 134870 156700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 426380000 26051 2310 24466 48847 39381 39381 1 9606 Homo sapiens 0.1038382427157103 SVVANDASTR Unmodified 1018.5043 0.5043369 454 A0A024R7I5;Q9NXH9-2;Q9NXH9;A8K8L2;K7EQQ8;A0A024R7G3;B4DHS5 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase yes no 0 0 0 3 0 1 31.819 31.897 2 0.0012287 6325 20230619_1882_Aki_TMTPro18x_K_F3 120.65 105.01 29257 16798 37101 38255 61203 57759 44626 55068 48022 34905 58698 63241 45181 47084 51808 19252 63996 55291 27063 15567 37393 37084 61120 56836 46095 55868 49087 37220 59173 62306 46916 47624 53048 21928 61053 52166 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10151000 26052 454 24467 48848 39382 39382 1 9606 Homo sapiens -0.0041750994719222945 SVVAPPGAPK Unmodified 921.52837 0.5283668 3455 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6;H3BSV8 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 0 0 0 1 0 1 43.403 43.403 2 0.0019617 11567 20230619_1880_Aki_TMTPro18x_K_F1 99.136 78.806 120170 86932 103690 114610 141690 174550 147170 146720 191040 146540 155620 159100 182040 139850 153730 181500 187440 172350 110910 79852 107390 114200 144560 171230 149340 151740 190620 148610 162490 160360 183560 147140 158830 181130 178910 163850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103520000 26053 3455 24468 48849 39383 39383 1 9606 Homo sapiens 0.0644637527714167 SVVDYNAYAGVWSQDK Unmodified 1800.8319 0.83187862 881 Q96MZ5;A0A087X0Q1;Q7Z739;Q8NA80;A0A024R7W5;B4DPX9;A0A087WY31;Q658Z6 YTHDF3;DKFZp451J085 YTH domain-containing family protein 3 yes no 0 0 0 7 0 1 60.448 60.491 3 4.8179E-08 17992 20230619_1887_Aki_TMTPro18x_K_F7 124.37 112.6 49784 40126 50226 54194 45685 57022 58779 53738 58469 66487 58637 64777 72515 57873 59004 77828 67360 71750 46033 36851 50955 53599 48198 57347 58495 55484 59655 66445 60803 65596 72908 60992 60804 77491 64399 68197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70981000 26054 881 24469 48850 39384 39384 1 9606 Homo sapiens -0.03650403986762285 SVVLMSHLGRPDGVPMPDK Oxidation (M) 2050.034 0.033966025 3374 V9HWF4;P00558;P00558-2 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 1 1 1.33 0.471 2 1 49.069 49.089 4;5 5.9821E-14 13748 20230619_1880_Aki_TMTPro18x_K_F1 155.49 119.84 99099 90617 99678 114240 102950 112220 106230 109150 102160 119320 123770 126560 122730 111670 114190 136890 128810 142290 91705 83124 101340 113390 106720 113570 106860 112020 105260 120210 125960 127670 124930 116990 117210 137390 123190 135040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 391640000 26055 3374 24470 48851;48852;48853 39385;39386 39385 1978;1979 2 9606 Homo sapiens 0.050950401028330816 SVVLMSHLGRPDGVPMPDK Unmodified 2034.0391 0.039051403 3374 V9HWF4;P00558;P00558-2 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 1 2 0.816 1 1 1 52.599 52.63 4 5.197699999999999E-19 15571 20230619_1881_Aki_TMTPro18x_K_F2 171.68 42.558 723480 546510 567510 674530 490110 631470 649640 654370 653380 771420 725370 749410 819390 738190 715190 844050 756570 889790 667470 501570 589060 670090 520490 642170 646100 670160 668930 772460 745160 761360 828580 767400 732130 848690 724400 844160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2618100000 26056 3374 24470 48854;48855;48856 39387;39388;39389 39387 3 9606 Homo sapiens 0.06339343965419175 SVVLMSHLGRPDGVPMPDK 2 Oxidation (M) 2066.0289 0.028880647 3374 V9HWF4;P00558;P00558-2 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 2 1 8 0 1 45.13 45.159 4 2.4811E-07 11575 20230619_1888_Aki_TMTPro18x_K_F8 104.84 88.531 156390 141720 164010 175330 228490 184590 166870 177220 162160 184170 209660 202590 174720 149410 180180 198410 165770 194290 144770 129980 166890 174430 229980 185990 171810 181740 167510 186210 211320 203070 179630 158440 182450 198320 158950 184480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 210760000 26057 3374 24470 48857 39390;39391 39391 1978;1979 2 9606 Homo sapiens 0.038507362401560385 SVVNMEWDK Unmodified 1106.5066 0.50664508 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 6 0 1 54.075 54.152 2 0.00047247 15679 20230619_1886_Aki_TMTPro18x_K_F6 134.59 90.858 137610 119620 130290 130990 122690 161760 139690 142560 161350 167320 152040 157540 168910 142700 171320 169070 168820 167420 127240 109600 132880 131800 128750 160770 140570 147590 162880 167490 157250 159830 171960 149100 174010 169400 161540 159040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43945000 26058 3402 24471 48858 39392 39392 1 9606 Homo sapiens -0.04234797533740675 SVVSDLEADDVK Unmodified 1275.6194 0.61942623 3433 P11388;P11388-2;P11388-3;P11388-4 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 2 0 1 53.783 53.812 2 2.9288E-17 16073 20230619_1881_Aki_TMTPro18x_K_F2 254.24 209.11 67742 59559 64464 64888 43336 73780 60386 52439 74604 74014 74507 72780 75713 65300 66780 80287 63553 74610 62643 54565 65469 65217 47379 73404 60351 55661 75189 73644 76481 73689 76804 68387 67968 80088 60915 70885 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19622000 26059 3433 24472 48859 39393 39393 1 9606 Homo sapiens -0.0073587032673003705 SVVTGGVQSVMGSR Unmodified 1362.6925 0.69254837 1189 A0A140VJN8;O60664-4;O60664-3;O60664;K7EL96;K7ERZ3 PLIN3 Perilipin-3 yes no 0 0 0 3 0 1 48.38 48.46 2 7.9463E-12 13476 20230619_1882_Aki_TMTPro18x_K_F3 201.04 170.47 77423 70688 85884 78225 91430 114130 92522 108470 105790 93918 97759 88344 100430 93009 87504 94780 110350 104510 71708 64762 86595 78896 94653 112520 93691 110710 106680 95555 100720 90147 101880 95877 90503 95750 105320 99183 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156020000 26060 1189 24473 48860 39394 39394 1 9606 Homo sapiens 0.02570979914912641 SVVTSIFGVK Unmodified 1035.5964 0.59644637 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;B4DVX2;Q7L4K8;Q9P1N9 IARS;DKFZp686L0869 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 4.5 0.5 2 2 61.534 61.56 2;3 5.6146E-08 18594 20230619_1885_Aki_TMTPro18x_K_F5 218.48 169.91 367700 325600 369790 377000 343900 373990 365500 360010 397020 459820 455590 463130 474780 407610 499920 529980 449420 567300 340190 298460 375090 376580 359790 378230 368450 371500 405380 459340 465720 468180 485080 428840 505340 532580 431300 537990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1506199999.9999998 26061 1736 24474 48861;48862;48863;48864 39395;39396 39396 2 9606 Homo sapiens 0.08007200137149084 SVVYQQSSK Unmodified 1024.5189 0.51892433 1642 A0A7G6J4N4;Q14694;Q14694-3;Q14694-2;Q6P2I0;H3BNA1 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 0 0 0 8 0 1 39.307 39.294 3 0.040397 9225 20230619_1888_Aki_TMTPro18x_K_F8 51.927 23.184 19480 13718 24397 25408 29214 31735 26696 27203 35230 25707 30216 31635 27104 24045 28543 21600 31277 26094 18035 12657 24452 24758 29892 31487 27327 28064 35174 26260 31113 31568 27840 24921 29108 22025 29864 24756 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10551000 26062 1642 24475 48865 39397 39397 1 9606 Homo sapiens 0.007645622009476938 SVWGSLAVQNSPK Unmodified 1371.7147 0.71466402 1299 A0A1U9X839;A0A1U9X830;P18615;P18615-3;H9ZYJ1;P18615-4 NELFE;NELF-E Negative elongation factor E yes no 0 0 0 3.5 0.5 1 1 55.377 55.403 3 1.3203E-06 16537 20230619_1882_Aki_TMTPro18x_K_F3 111.31 83.669 77062 59744 74294 77146 66721 86988 88899 81340 85695 83498 78810 69219 81402 61506 82195 90310 86782 85173 71213 54851 75632 76604 70578 87042 88240 83558 87215 83838 81259 70719 82993 65270 83865 89972 82977 80958 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87346000 26063 1299 24476 48866;48867 39398 39398 1 9606 Homo sapiens 0.04367527654994774 SVYDDQPNAHK Unmodified 1272.5735 0.57347909 1959 E7EW84;A5YP36;B4DEZ1;B3KXY5;B7Z6G5;Q8TAG9-2;Q8TAG9;B1AP46 EXOC6;SEC15L3 Exocyst complex component 6 yes no 0 0 0 3 0 1 35.963 36.02 3 0.0072627 7969 20230619_1882_Aki_TMTPro18x_K_F3 77.64 66.735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26064 1959 24477 48868 39399 39399 1 9606 Homo sapiens -0.051904707182984566 SVYFKPSLTPSGEFR Unmodified 1713.8726 0.87262123 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 1 3.5 0.5 1 1 54.083 54.118 3 1.8986E-05 15825 20230619_1883_Aki_TMTPro18x_K_F4 110.04 90.969 166130 131810 151310 171890 134460 180000 169190 162460 180380 164700 158550 140500 157860 129600 162320 148730 146760 110570 153480 121020 154850 170360 142210 180900 168930 167290 182230 165640 163600 143400 161300 135040 164030 147110 140320 105560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182320000 26065 68 24478 48869;48870 39400 39400 1 9606 Homo sapiens 0.0442398212351236 SVYGGEFIQQLK Unmodified 1367.7085 0.70851601 4574 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes yes 0 0 0 1 0 1 59.542 59.542 3 0.00069711 18292 20230619_1880_Aki_TMTPro18x_K_F1 91.694 62.718 90163 75105 90809 86036 82260 79763 94673 82525 91818 95558 103080 101100 119720 93328 101700 124830 103840 112040 83386 68853 92021 85957 86333 81258 94668 84525 94185 96037 105950 102190 120740 98209 103980 124150 99392 106520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77919000 26066 4574 24479 48871 39401 39401 1 9606 Homo sapiens 0.039370094234755015 SVYSWDIVVQR Unmodified 1350.6932 0.6932003 3242 O15371-2;O15371-3;O15371;B4E1K8;B0QYA4 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 0 3.67 3.09 1 1 1 58.884 58.903 2 1.3399E-08 18040 20230619_1880_Aki_TMTPro18x_K_F1 179.81 153.69 163230 138070 148980 161520 135680 163640 169000 163210 173980 190760 172510 186310 203140 175730 197320 222390 204080 228100 150860 126590 152420 161250 143000 165300 168650 167530 177060 191150 178560 188980 206100 184100 201270 222960 195370 216500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190150000 26067 3242 24480 48872;48873;48874 39402;39403 39402 2 9606 Homo sapiens 0.03188142626277113 SVYWENTLHTLK Unmodified 1489.7565 0.75652884 3671 P57740;P57740-2;P57740-3 NUP107 Nuclear pore complex protein Nup107 yes no 0 0 0 1.5 0.5 1 1 54.982 54.992 3 5.635E-06 16615 20230619_1881_Aki_TMTPro18x_K_F2 119.96 81.877 83507 71209 86060 91739 76548 93599 90534 91545 100130 95667 88663 92217 93264 87100 99431 110050 93754 102890 77256 65352 87113 90980 80705 94431 90794 93784 101030 96370 91769 93618 95388 91188 100750 109800 89822 97764 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144800000 26068 3671 24481 48875;48876 39404 39404 1 9606 Homo sapiens 0.031240833435049353 SWCPDCVQAEPVVR Unmodified 1701.7603 0.76031036 1212 A0A140VJY7;Q9BRA2;I3L0K2;I3L3M7 TXNDC17 Thioredoxin domain-containing protein 17 yes no 0 0 0 4.5 0.5 1 1 50.262 50.316 2 1.5821999999999999E-21 13897 20230619_1885_Aki_TMTPro18x_K_F5 221.6 204.97 53267 46383 48085 52523 50692 62071 60143 61892 61181 62154 57112 59949 75371 53249 55735 69586 66470 67910 49234 42510 49357 52676 52750 62029 60128 63231 62151 62723 59597 60739 75346 56067 57687 69528 63505 64514 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85285000 26069 1212 24483 48877;48878 39405;39406 39406 2 9606 Homo sapiens -0.06249938216615192 SWCQEELSVAVK Unmodified 1434.6813 0.68131498 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 6 0 1 55.962 56.037 3 0.0017786 16462 20230619_1886_Aki_TMTPro18x_K_F6 88.552 65.832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26070 2863 24484 48879 39407 39407 1 9606 Homo sapiens -0.018638421792502413 SWDAINR Unmodified 860.41407 0.41406533 347;1713 B7Z7Q6;E9PNF7;A0A024R5L0;P42785;P42785-2;E9PQB5;E9PL85;E9PKN6;E9PLY4;A0A7P0TB23 PRCP Lysosomal Pro-X carboxypeptidase no no 0 0 0 5.5 0.5 1 1 42.972 43.059 2 0.052122 10791 20230619_1885_Aki_TMTPro18x_K_F5 85.265 31.711 138900 119390 144640 143710 215070 227110 259750 266680 334030 156890 168870 161320 171160 146870 170840 153920 192240 178820 128520 109490 147590 144310 218990 224180 261310 266580 328860 164860 181110 163190 174710 152390 174810 156020 183630 169630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158750000 26071 347;1713 24485 48880;48881 39408;39409 39408 2 9606 Homo sapiens -0.0217251448495972 SWDSSSPVDRPEPEAASPTTR Unmodified 2271.0404 0.04036785 2733 C9J0I9;Q86WB0;Q86WB0-2 ZC3HC1 Nuclear-interacting partner of ALK yes no 0 0 1 3 0 1 42.148 42.21 3 5.6219E-55 10570 20230619_1882_Aki_TMTPro18x_K_F3 273.42 242.82 23917 21289 24687 26903 30508 29939 29728 33483 28994 28406 31442 33772 29862 29870 36174 31527 36185 39652 22133 19531 25111 26751 31167 30131 30011 33813 29680 29132 32111 33908 30858 31018 36649 32125 34646 37563 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38823000 26072 2733 24486 48882 39410 39410 1 9606 Homo sapiens -0.04431071931094266 SWDTNLIECNLDQELK Unmodified 1976.915 0.91495633 630 A0A024RAM4;P46821;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RGJ3;D6RCL2 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 4 0 1 62.96 62.966 3 3.3678E-26 19586 20230619_1883_Aki_TMTPro18x_K_F4 237.05 184.78 78013 62622 75997 73021 55773 63863 70433 68669 69828 84725 90935 94576 92091 90145 89235 103080 102880 114580 72113 57427 77041 72810 59933 65402 70210 70281 72061 85035 92397 95424 93902 93779 91625 103980 98388 108660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142600000 26073 630 24487 48883 39411 39411 1 9606 Homo sapiens -0.03442455321032867 SWEEQMIEVGRK Unmodified 1490.7188 0.71876312 2871 Q6LES8;E5KSX8;E5KSU5;Q00059;Q00059-2 TFAM Transcription factor A, mitochondrial yes no 0 0 1 6 0 1 52.866 52.943 3 8.1132E-10 15167 20230619_1886_Aki_TMTPro18x_K_F6 180.17 165.18 207930 219390 244250 216870 215480 240720 222900 245840 220670 270100 256070 231200 257840 213690 263310 313010 274760 263780 192890 200720 244480 219770 226180 241860 224500 251330 226640 270350 261040 236090 263320 226250 268570 310040 262700 251100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134970000 26074 2871 24488 48884 39412 39412 1 9606 Homo sapiens -0.006967509136075023 SWGNNYPQHR Unmodified 1257.5639 0.56391746 4432 Q9BTL3;A0A3B3IU46 FAM103A1 RNMT-activating mini protein yes no 0 0 0 1 0 1 33.98 33.98 3 4.6354E-06 7585 20230619_1880_Aki_TMTPro18x_K_F1 162.34 144.53 14543 12365 16264 15621 21182 24907 20467 19857 24350 20021 24595 24939 20442 20756 23053 19088 27101 25416 13464 11346 16453 15627 21605 24358 20794 20634 24575 20387 25049 24945 21147 21451 23596 19578 25879 24080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11643000 26075 4432 24489 48885 39413 39413 1 9606 Homo sapiens -0.05456194213161325 SWLFGINK Acetyl (Protein N-term) 1005.5284 0.5283668 4603 Q9NVI7-2;Q9NVI7 ATAD3A ATPase family AAA domain-containing protein 3A yes no 1 0 0 2.5 0.5 1 1 66.441 66.463 2 0.00069287 21133 20230619_1882_Aki_TMTPro18x_K_F3 88.734 71.958 24840 31508 19719 13682 49427 126650 38022 37466 142580 5606.7 3165 9158.9 8816.5 9569.7 12081 8484.5 13836 8529.5 23009 28681 20969 16725 49513 117260 42036 43488 133300 7901.8 9626 9158.2 9055.9 9787.4 12300 8560.7 13184 8120.3 2 2 2 2 2 2 2 2 2 2 1 2 2 2 2 2 2 2 35830000 26076 4603 24490 48886;48887 39414;39415 39415 2 9606 Homo sapiens 0.02582375277143001 SWLHNDLK Unmodified 1011.5138 0.51377937 1339 E5KRK5;A0A291FIZ5;P28331-4;P28331;P28331-2;P28331-5;B4DJ81;P28331-3 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 8 0 1 46.155 46.194 3 0.0022396 11961 20230619_1888_Aki_TMTPro18x_K_F8 106.18 65.826 109560 87321 129520 125630 130500 154330 133430 140580 131590 108120 114210 117680 127070 105950 108850 118050 124500 123300 101440 80256 129910 124070 135550 153480 134370 143670 133430 111330 118600 118670 128410 110340 111910 118710 118960 117060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56033000 26077 1339 24491 48888 39416;39417 39416 2 9606 Homo sapiens 0.008483031289756582 SWLLPVIR Unmodified 982.59639 0.59638679 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9;B3KY97 RRP12 RRP12-like protein yes no 0 0 0 6 0 1 62.326 62.378 2 0.003934 19172 20230619_1886_Aki_TMTPro18x_K_F6 117.93 80.559 187150 154810 182000 199210 184930 221090 219040 219300 237280 219320 161880 165470 229380 170990 183360 245890 225560 222400 173030 142090 185500 197800 192900 221790 219390 224120 237860 220060 172630 170690 229700 180310 189930 244370 215390 211500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119610000 26078 2355 24492 48889 39418 39418 1 9606 Homo sapiens 0.10439244927795244 SWLPQNCTLVDMK Oxidation (M) 1606.7483 0.74834869 3489 P22234;P22234-2;E9PBS1;B4DGX3;D6RF62 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 1 0 4.5 3.5 1 1 57.391 57.417 3 0.00076501 16717 20230619_1888_Aki_TMTPro18x_K_F8 85.45 72.25 213420 173100 200330 209060 206290 205650 212850 212700 236000 222800 224200 201080 228400 197640 247560 234350 241660 215720 197230 158790 204700 208180 213840 208460 215000 217090 238670 224000 230700 205120 233900 205910 250990 233940 231100 205190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 620760000 26079 3489 24493 48890;48891 39419;39420 39420 2151 2 9606 Homo sapiens -0.03075554959832516 SWLPQNCTLVDMK Unmodified 1590.7534 0.75343407 3489 P22234;P22234-2;E9PBS1;B4DGX3;D6RF62 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 1.67 0.471 1 2 61.492 61.497 2;3 0.0001104 19284 20230619_1881_Aki_TMTPro18x_K_F2 132.32 117.35 72446 70915 84892 83142 83843 77869 83553 75206 61173 68368 90807 65424 70980 57475 84537 82633 79728 69142 67166 64990 85150 82920 86942 79142 83629 76888 64760 69340 90777 66432 73673 60874 85449 81889 76257 65853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1047499999.9999999 26080 3489 24493 48892;48893;48894 39421;39422 39422 2 9606 Homo sapiens -0.018312510972009477 SWLSYSYQSR Unmodified 1275.5884 0.58840088 3931 Q15393;A8K6V3;B3KQH1;B3KM77 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 4 0 1 52.741 52.765 2 4.3216E-19 15265 20230619_1883_Aki_TMTPro18x_K_F4 249.03 200.26 300380 299840 312700 307410 342150 458110 390800 410900 438020 136170 113030 103090 116240 93368 245390 140820 156080 124960 278230 274440 317200 311960 354980 450520 392470 415510 429640 151880 131670 106150 124750 99182 241740 140190 149990 118970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138780000 26081 3931 24494 48895 39423;39424 39424 2 9606 Homo sapiens -0.03836978850313244 SWNDCLNK Unmodified 1035.4444 0.44437918 4746 Q9Y5B9;Q0VGA3 SUPT16H FACT complex subunit SPT16 yes no 0 0 0 6.5 0.5 2 2 47.5 47.585 2;3 0.0022496 12447 20230619_1887_Aki_TMTPro18x_K_F7 129.72 87.738 279580 254480 303140 255370 362690 337310 373780 326360 361220 327060 333830 285490 346690 285750 413730 296550 450740 309800 258880 232950 306560 259180 371610 334920 375730 334180 367620 329340 344290 291840 356630 295450 420830 299000 429930 294620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 689260000 26082 4746 24495 48896;48897;48898;48899 39425;39426 39426 2 9606 Homo sapiens -0.07192523882099522 SWNETLTSR Unmodified 1092.52 0.51998696 3323 O75947;O75947-2;A0PJH2;F5H608 ATP5H ATP synthase subunit d, mitochondrial yes no 0 0 0 6 0.816 1 1 1 44.391 44.475 2 5.2851E-06 11424 20230619_1886_Aki_TMTPro18x_K_F6 183.43 116.86 449470 384840 460810 496640 499280 585130 589310 579100 654090 617780 616890 634700 675550 523310 608260 579670 697670 640930 415820 353190 468090 493490 518190 584670 590880 592990 661230 622790 637400 639540 684140 546820 624430 585190 666270 608320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 551160000 26083 3323 24496 48900;48901;48902 39427;39428 39427 2 9606 Homo sapiens -0.022572234301378558 SWPSAPDDSK Unmodified 1088.4775 0.47745344 3618 P50479;A0A0S2Z4P0;A0A0S2Z4N4;P50479-2;C9J542 PDLIM4 PDZ and LIM domain protein 4 yes no 0 0 0 4.5 0.5 1 1 46.533 46.593 2 0.00022731 12438 20230619_1883_Aki_TMTPro18x_K_F4 152.28 97.727 75848 67118 76191 64746 51235 46071 51552 49215 57894 83836 92186 89165 102680 76529 79705 99055 101010 81990 70173 61427 76884 65427 55128 48178 52259 51032 60094 82983 93379 89865 103300 80566 82727 98177 96312 78125 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29523000 26084 3618 24497 48903;48904 39429 39429 1 9606 Homo sapiens -0.06324618558392103 SWQDELAQQAEEGSAR Unmodified 1803.8024 0.80236941 567 A0A024R9D2;Q86UE4 MTDH Protein LYRIC yes no 0 0 0 2 0 1 52.828 52.861 2 3.4233E-19 15681 20230619_1881_Aki_TMTPro18x_K_F2 212.69 161.62 37926 28293 33040 33637 32677 41986 40235 38169 45894 41749 37698 42902 48241 42506 43096 55085 48250 56854 35012 25958 33979 33645 34236 41721 40294 39352 46117 42055 39567 43496 48678 44523 44267 55212 46175 53950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34398000 26085 567 24498 48905 39430 39430 1 9606 Homo sapiens -0.0673796800283526 SWSNIPFITVPLSR Unmodified 1615.8722 0.8722273 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 7 0 1 64.195 64.225 2 0.06701 19767 20230619_1887_Aki_TMTPro18x_K_F7 58.398 27.325 29145 23368 29360 26884 25472 31553 28821 29690 33190 32858 33960 33958 36336 32687 29981 38268 37945 45336 26948 21427 29736 26936 26886 31506 29017 30539 33601 33076 34905 34390 36726 34061 31087 38733 36280 42958 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52363000 26086 3654 24499 48906 39431 39431 1 9606 Homo sapiens 0.08892607194343327 SWVIDQK Unmodified 874.45487 0.45486751 3129 J3KQ32;Q9NTK5;Q53SQ6;Q9NTK5-2;B4DK14;Q9NTK5-3;C9JCJ9 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 0 8 0 1 50.811 50.888 2 0.055472 13869 20230619_1888_Aki_TMTPro18x_K_F8 83.753 6.9784 112830 92619 99321 103880 114920 132840 126520 107990 123940 137530 135360 117770 156150 108350 136800 146800 136770 122880 104230 84897 102300 104370 118490 131570 126780 112850 126970 136820 139140 120210 157600 114200 139490 145540 130770 117010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290490000 26087 3129 24500 48907 39432 39432 1 9606 Homo sapiens 0.012618268346727746 SWWQVEK Unmodified 961.46577 0.46576654 2013 Q9HCJ6;A8K288;Q8NDE0 VAT1L;DKFZp547P162 Synaptic vesicle membrane protein VAT-1 homolog-like yes no 0 0 0 1 0 1 56.199 56.199 3 0.015366 16951 20230619_1880_Aki_TMTPro18x_K_F1 79.469 38.439 10674 13316 18398 11496 10783 14073 20239 16456 23233 16313 13965 11279 15145 14243 13980 19364 15997 16899 9961.7 12165 17900 11825 12051 14095 19939 16644 23104 16360 14800 11800 15382 14861 14378 19221 15293 16073 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9137600 26088 2013 24501 48908 39433 39433 1 9606 Homo sapiens -0.01650770791047762 SYAEELAK Unmodified 909.44436 0.4443624 1271 A0A1B0GV93;B4DWS6;B3KQJ0;Q53GQ0;A0A1B0GVY6;Q53GQ0-2 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes no 0 0 0 4 0.816 1 1 1 46.37 46.436 2 0.005101 12388 20230619_1883_Aki_TMTPro18x_K_F4 114.5 43.155 112000 82814 110220 116800 100330 86412 112550 105020 123030 139130 158180 143590 138320 130900 129020 160220 162950 166500 103490 76120 111970 114760 105130 90175 113150 106990 126160 138870 159660 145220 141460 136950 133410 160790 155600 158060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 316050000 26089 1271 24502 48909;48910;48911 39434 39434 1 9606 Homo sapiens -0.013982006104356515 SYAPELGRPK Unmodified 1116.5928 0.59275797 2541 Q6IA61;G3V4K3;B4DMB7;Q9H9C1-2;Q9H9C1 C14orf133;VIPAS39 Spermatogenesis-defective protein 39 homolog yes no 0 0 1 1 0 1 40.678 40.678 3 0.00074789 10388 20230619_1880_Aki_TMTPro18x_K_F1 99.283 80.185 68230 56958 70533 75161 83480 88558 84028 81880 98846 86664 96027 97520 100390 88333 96552 92927 113130 103660 63116 52290 71681 74570 85679 88380 85143 84244 99720 87695 98867 98192 102170 91663 99134 93933 108010 98382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46009000 26090 2541 24503 48912 39435 39435 1 9606 Homo sapiens 0.03912530363277256 SYCAEIAHNVSSK Unmodified 1464.6667 0.66672755 199 D3YTB1;A0A024R2G7;F8W727;P62910 RPL32 60S ribosomal protein L32 yes no 0 0 0 7 0.707 1 2 1 42.977 43.043 3;4 1.0152E-07 10492 20230619_1887_Aki_TMTPro18x_K_F7 152.99 140.01 327780 281660 320720 309110 326530 408930 377330 371750 339080 369200 191620 210640 453700 254860 214400 452710 409840 410550 303130 258080 326490 311360 340300 405020 376290 382090 342580 368440 214990 222760 442770 272660 234300 448540 390240 390390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1767599999.9999998 26091 199 24504 48913;48914;48915;48916 39436;39437;39438 39437 3 9606 Homo sapiens -0.04701914327392842 SYCNDQSTGDIK Unmodified 1386.5722 0.57215846 1184 Q6LET3;A0A140VJL3;P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes no 0 0 0 3 0 1 40.713 40.772 2 0.023999 9921 20230619_1882_Aki_TMTPro18x_K_F3 63.283 55.685 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26092 1184 24505 48917 39439 39439 1 9606 Homo sapiens -0.10566472869368226 SYCSNLVR Unmodified 997.46511 0.46511462 4746 Q9Y5B9;Q0VGA3 SUPT16H FACT complex subunit SPT16 yes no 0 0 0 5.33 3.09 1 1 1 38.583 38.6 2 0.0014373 8892 20230619_1888_Aki_TMTPro18x_K_F8 142.64 117.47 380260 288940 320820 340470 422720 470210 388000 420000 526600 250330 244350 225860 226120 195030 293170 267740 317740 234440 351010 265060 332490 341320 430520 464420 397320 427820 516570 261890 263200 229650 234780 206000 298110 266120 303190 223330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 465340000 26093 4746 24506 48918;48919;48920 39440;39441;39442 39442 3 9606 Homo sapiens -0.033719335023988606 SYDACDTLRPR Unmodified 1352.6143 0.61429805 1300 Q59GU8;Q6IBT5;Q5JQI0;A8K4K1;A0A1U9X836;Q99519 NEU1 Sialidase-1 yes no 0 0 1 5.5 0.5 1 1 36.951 37.031 3 2.0443E-07 8375 20230619_1886_Aki_TMTPro18x_K_F6 170.02 143.13 64766 52129 68789 73636 86861 97667 95754 90872 113270 89654 90207 81163 97605 76990 85281 93503 84844 80554 59912 47899 69866 72885 89045 96747 96516 93253 113430 90476 93895 82689 98756 80446 86957 92960 81152 76664 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65769000 26094 1300 24507 48921;48922 39443;39444 39444 2 9606 Homo sapiens -0.047904526703632655 SYDSLPNFTAADCLR Unmodified 1728.7777 0.77773456 2593 E7ER68;B4DUD8;Q658Y4;G3V120 FAM91A1 Protein FAM91A1 yes no 0 0 0 6 0 1 58.39 58.459 2 7.9522E-05 17504 20230619_1886_Aki_TMTPro18x_K_F6 103.14 89.472 23045 21269 23516 27942 23764 26230 26560 27822 28445 29947 26853 28944 28714 28575 29297 35772 30294 38124 21330 19518 23880 27642 24735 26688 26684 28371 28829 30118 27731 29420 29306 29857 29876 35941 29030 36157 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34342000 26095 2593 24508 48923 39445 39445 1 9606 Homo sapiens -0.057503194099354005 SYDSYEILGK Unmodified 1173.5554 0.55536941 3315 O75691 UTP20 Small subunit processome component 20 homolog yes yes 0 0 0 5.33 0.471 2 1 55.156 55.227 2;3 0.0018515 15949 20230619_1885_Aki_TMTPro18x_K_F5 100.84 61.127 86773 71164 78430 87315 79781 94945 97371 80472 111110 102650 104170 101850 118750 93557 109900 115990 104020 120770 80174 65287 80459 86936 83316 95093 97531 83865 112130 102580 107840 103170 120250 98018 111630 116450 99697 114600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71179000 26096 3315 24509 48924;48925;48926 39446;39447 39446 2 9606 Homo sapiens -0.02446605693012316 SYDVPPPPMEPDHPFYSNISK Oxidation (M) 2432.0995 0.099462633 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8;B4DKL5;Q8N0Y7 PGAM1;PGAM4 Phosphoglycerate mutase;Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 yes no 0 1 0 6 0.632 1 3 1 52.859 52.933 3;4 1.0935E-10 15139 20230619_1886_Aki_TMTPro18x_K_F6 130.89 116.12 194550 161060 170730 211620 202500 227140 210780 214740 241800 201320 205830 201640 221920 183030 209790 228660 195570 229280 179730 147860 176150 209680 208160 228190 212980 219900 243080 204270 213580 204150 225350 191870 212880 229030 187490 217640 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 433380000 26097 3475 24510 48927;48928;48929;48930;48931 39448;39449;39450;39451;39452 39449 2122 5 9606 Homo sapiens -0.05930311961128609 SYDVPPPPMEPDHPFYSNISK Unmodified 2416.1045 0.10454801 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8;B4DKL5;Q8N0Y7 PGAM1;PGAM4 Phosphoglycerate mutase;Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 yes no 0 0 0 6.2 1.17 2 1 1 1 56.136 56.199 3;4 4.0288E-08 16188 20230619_1887_Aki_TMTPro18x_K_F7 113.26 99.245 143730 122990 146930 143990 122210 149610 156910 140440 149080 256740 243620 317970 347070 289910 208300 293520 286930 424270 132960 112770 148630 143810 129880 150670 156050 147290 156630 254920 250390 318700 344300 300390 219100 301920 274720 401090 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 984220000 26098 3475 24510 48932;48933;48934;48935;48936 39453;39454;39455;39456 39455 4 9606 Homo sapiens -0.04686008098542516 SYDYDLIIIGGGSGGLAAAK Unmodified 1939.9891 0.98910755 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;E9PKD3;A0A0B4J225;E9PIZ5;E9PKI4;E9PLT3;E9PQI3 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 63.027 63.056 3 0.033659 19250 20230619_1887_Aki_TMTPro18x_K_F7 44.816 33.761 29040 23591 25729 27326 24768 27309 23426 29292 32544 33734 33940 41094 42909 35421 40025 45700 33186 44309 26826 21631 26400 27299 25794 27668 24007 29894 32718 34071 35201 41185 43353 37264 40410 45664 31895 42058 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 947570000 26099 682 24511 48937;48938 39457 39457 1 9606 Homo sapiens 0.05671255832794486 SYEAQDPEIASLSGK Unmodified 1593.7522 0.75223132 4404 Q99622;F5GXW5;U3KQ85 C12orf57 Protein C10 yes no 0 0 0 3.5 0.5 1 1 52.53 52.571 3 1.6682E-10 15145 20230619_1883_Aki_TMTPro18x_K_F4 149.3 134.73 84773 70123 83487 82892 69968 88048 85616 88944 98205 98570 85463 94252 98478 85509 69470 109500 98488 110250 78383 64306 84721 82761 74265 88647 85839 91047 98880 98967 88882 95565 98764 89766 72980 109570 94034 104670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 242820000 26100 4404 24512 48939;48940 39458 39458 1 9606 Homo sapiens -0.020894706607123226 SYEEHLEK Unmodified 1033.4716 0.47163978 3763 P82914;D3DPS9 MRPS15 28S ribosomal protein S15, mitochondrial yes no 0 0 0 2 0 1 38.164 38.227 3 0.011368 8999 20230619_1881_Aki_TMTPro18x_K_F2 75.378 29.377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26101 3763 24513 48941 39459 39459 1 9606 Homo sapiens -0.04375717070047358 SYEIASLVR Unmodified 1036.5553 0.55530983 1705 Q9NXE4-4;Q9NXE4-6;A0A7P0T9J6;A0A7P0TB24;Q9NXE4-8;Q9NXE4-2;Q9NXE4;Q9NXE4-5;Q9NXE4-9;Q9NXE4-3;Q9NXE4-10;Q9NXE4-7;A0A7P0TB44;B4E0T5;H7C1Q6 SMPD4 Sphingomyelin phosphodiesterase 4 yes no 0 0 0 8 0 1 52.211 52.288 2 0.04841 14502 20230619_1888_Aki_TMTPro18x_K_F8 67.507 43.172 116690 96692 107300 125680 106590 128310 128370 129870 146100 136780 135770 129710 137080 115540 143550 161740 145120 142140 107830 88756 109900 124550 111470 129540 128720 132760 147410 137660 139840 131600 140180 122070 146050 160640 138820 135230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82253000 26102 1705 24514 48942 39460 39460 1 9606 Homo sapiens 0.03849439097666618 SYELPDGQVITIGNER Unmodified 1789.8846 0.88464248 3112;3679;2695;4827;4132 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;A6NL76;B3KW67;A0A804HKV3;Q13707;P63267-2;B4DUI8;B3KPP5;K4ENJ5;K4EP00;K4EQ44;A0A173GMX0;P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;Q96FU6;Q96DE1;A5GZ75;A4UCT3;F1BXA6;Q562R1;A0A2R8YEA7;Q9BYX7;G8FSY7;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;B3KUD3;Q6S8J3;A5A3E0;V9HVZ7 ACTA1;ACTC1;ACTA2;ACTG2;ACTG1;ACTBL2;POTEKP;ACTB;PS1TP5BP1;POTEE;POTEF;HEL-176 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F no no 0 0 0 4.67 1.49 1 1 2 2 2 1 59.774 59.809 2;3 1.1202E-42 18135 20230619_1886_Aki_TMTPro18x_K_F6 346.02 324.76 1897800 1493800 1738000 1985400 1784300 2365700 2224300 2284500 2276600 2416800 2283900 2073800 2591400 1988100 2039100 2491400 2190500 2320500 1753200 1371800 1781800 1969100 1864600 2359900 2218900 2342200 2318000 2424700 2354700 2119000 2607200 2081500 2094100 2484700 2095300 2205400 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 27334000000 26103 2695;3112;3679;4132;4827 24515 48943;48944;48945;48946;48947;48948;48949;48950;48951 39461;39462;39463;39464;39465;39466;39467;39468 39466 8 9606 Homo sapiens 0.02129554076077511 SYELQESNVR Unmodified 1223.5782 0.57823012 1492 D6RGI3;A0A384P5S0;D6RER5;Q9NVA2;Q9NVA2-2;D6RDU5;D6RDP1;D6R9Y6 SEPT11 Septin-11 yes no 0 0 0 2.5 0.5 1 1 39.605 39.667 2 1.6986E-20 9452 20230619_1882_Aki_TMTPro18x_K_F3 266.54 147.33 339760 254070 290470 309160 349850 398240 337910 332560 397340 390090 492440 492020 450060 392780 413680 504620 532700 489150 313620 233160 300180 308820 358680 394420 343310 345840 405080 394300 498850 491700 459100 414180 428360 504170 508230 464920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 570170000 26104 1492 24516 48952;48953 39469;39470 39470 2 9606 Homo sapiens -0.02461586575554975 SYENQKPPFDAK Unmodified 1422.6779 0.67794416 1810 P16435;Q59ED7;A8K3B4;B2R6E5;Q63HL4;A0A8V8NE24;H0Y4R2;B4DJI8;B4DDH3;B4DKM8;E7EMD0;B4E305 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase yes no 0 0 1 7 0 1 44.652 44.738 3 0.0016588 11203 20230619_1887_Aki_TMTPro18x_K_F7 85.973 73.095 109160 86037 96067 116920 101480 114820 100940 102590 110740 147580 152270 143180 164710 133730 128060 180430 158540 152340 100820 79028 98876 115450 105030 115970 102180 106870 114090 146550 154720 145310 165920 140720 132840 178840 151350 145010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189010000 26105 1810 24517 48954 39471 39471 1 9606 Homo sapiens -0.016487689615814816 SYEPGEPNCR Unmodified 1207.4928 0.49278593 3043 H0YEB8;Q96LT9-2;Q96LT9 RNPC3 RNA-binding protein 40 yes no 0 0 0 2 0 1 33.951 34.008 2 0.0037648 7295 20230619_1881_Aki_TMTPro18x_K_F2 93.162 64.076 11964 10464 12448 12040 13696 18635 14673 15129 16414 18143 15950 15644 18939 15203 12869 14639 20434 21648 11071 9591.3 12627 12117 14181 18254 14794 15768 16623 18100 16508 15969 18947 15689 13619 15105 19486 20483 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13065000 26106 3043 24518 48955 39472 39472 1 9606 Homo sapiens -0.10266075032836852 SYEPLEDPGVK Unmodified 1232.5925 0.5924832 1232 A0A140VK56;P37837-2;P37837;F2Z393 TALDO1 Transaldolase yes no 0 0 0 3.29 1.03 2 2 2 1 49.789 49.848 2;3 1.2007E-08 14045 20230619_1882_Aki_TMTPro18x_K_F3 212.21 194.48 429920 346170 383970 428210 398070 462300 469780 438640 506780 553200 578120 593950 597760 517230 532220 638430 628240 656010 397140 317630 394420 426120 414560 464330 470640 452930 517240 554110 590740 598530 606450 542460 548250 640280 600360 622790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1673599999.9999998 26107 1232 24519 48956;48957;48958;48959;48960;48961;48962 39473;39474;39475 39474 3 9606 Homo sapiens -0.01450934147260341 SYFLIVR Unmodified 896.51199 0.51198846 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;O00429-7;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402 DNM1L Dynamin-1-like protein no no 0 0 0 4.5 0.5 1 1 56.207 56.242 2 0.050738 16361 20230619_1885_Aki_TMTPro18x_K_F5 85.89 51.185 199090 173830 180870 231700 207980 257630 236740 228490 276960 146930 131220 119640 135290 112490 200390 159420 170370 141860 184030 159580 186030 229440 214960 257740 238110 233320 273680 152310 141760 122620 141090 118780 200720 158590 163100 135030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146570000 26108 3212;3213 24520 48963;48964 39476 39476 1 9606 Homo sapiens 0.05959294111039526 SYFSEEGIGYNIIR Unmodified 1646.794 0.79403656 792 B7Z6S9;A0A068F579;A0A068F658;A0A0G2JLB3;B2R6A7;D3DV87;B7Z7G9;A0A0G2JNZ5;P04062-4;P04062-2;P04062;A0A068FB60;B7Z6E6;A0A223PQI4 GBA Glucosylceramidase yes no 0 0 0 6.67 0.471 1 2 60.308 60.351 2;3 5.929E-13 17937 20230619_1887_Aki_TMTPro18x_K_F7 193.28 169.01 101440 83563 94804 124390 113660 124480 117000 136320 145200 127340 121150 129060 130150 109040 124590 129920 127430 142010 93750 76824 97323 122190 116700 126080 118660 138160 145370 129230 125890 130240 132280 114280 126980 130880 122000 134700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71478000 26109 792 24521 48965;48966;48967 39477;39478;39479 39479 3 9606 Homo sapiens -0.003488701815058448 SYFSSFTDDIISQPMLK Oxidation (M) 1993.9343 0.93429479 2627 B4DZ87;O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 1 0 1 0 1 63.411 63.411 3 0.0014627 19912 20230619_1880_Aki_TMTPro18x_K_F1 71.08 62.138 12676 11348 13394 14751 11947 12583 12636 16090 13392 22119 23810 21326 25023 21838 21041 26227 24402 31236 11733 10413 13531 14592 12534 12972 12749 16346 14049 21987 23971 21718 25311 22751 21683 26546 23363 29590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51425000 26110 2627 24522 48968 39480 39480 1578 1 9606 Homo sapiens -0.02291499030138766 SYGATATSPGER Unmodified 1195.5469 0.54692999 2428 B3KVY9;Q8TB61-3;Q8TB61-2;Q8TB61;Q8TB61-5;Q8TB61-4 SLC35B2 Adenosine 3'-phospho 5'-phosphosulfate transporter 1 yes no 0 0 0 3.5 0.5 1 1 32.965 33.03 2 6.0252E-05 6699 20230619_1883_Aki_TMTPro18x_K_F4 127.51 109.62 39764 25195 48666 48235 61305 74653 63774 64444 75071 58922 76167 91024 71029 73016 73578 38707 88793 73130 36785 23269 48904 47120 62783 73179 64499 66381 75804 60852 77984 90204 72871 74067 75405 41514 84701 69151 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 62273000 26111 2428 24523 48969;48970 39481;39482 39482 2 9606 Homo sapiens -0.043021596096195935 SYGLGSEQR Unmodified 995.46722 0.46722311 1600 Q6DHZ8;B2RBM8;A0A669KBJ7;Q9H2P0;A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein yes no 0 0 0 4 0.816 1 1 1 36.123 36.173 2 1.0303E-11 7974 20230619_1883_Aki_TMTPro18x_K_F4 219.25 194.08 63695 50287 60653 70009 80672 71576 73429 74482 92094 73991 85158 80974 81936 69024 75454 77829 103660 81603 58861 46203 62202 69081 81911 72357 75025 75884 92433 75046 87521 81502 83450 72065 78397 78282 98753 77548 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93318000 26112 1600 24524 48971;48972;48973 39483;39484 39483 2 9606 Homo sapiens -0.030691814929582506 SYGNFYK Unmodified 877.39702 0.39701828 224 Q8IV48;A0A024R355;B4DWF4 ERI1;THEX1 3'-5' exoribonuclease 1 yes no 0 0 0 2 0 1 47.086 47.162 2 0.027787 13145 20230619_1881_Aki_TMTPro18x_K_F2 100.45 66.373 138380 117100 128090 146170 166160 185140 170650 157400 183490 162940 180880 187820 181720 153530 152220 195110 205400 191890 127910 107440 131680 145690 169730 183610 172140 162900 186050 165190 185770 188420 184090 161680 158480 195090 195920 182340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104210000 26113 224 24525 48974 39485 39485 1 9606 Homo sapiens -0.046584350907664884 SYGPAPGAGHVQEESNLSLQALESR Unmodified 2596.2518 0.25175761 71 A0A024QZY1;Q13155;B2R7M3 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes no 0 0 0 5.33 1.25 1 1 1 51.204 51.257 3 6.2933E-64 14552 20230619_1883_Aki_TMTPro18x_K_F4 283.96 264.67 87564 73299 89568 92290 77779 88670 92746 85762 81280 103400 100380 111990 107080 90055 98676 114740 106620 129550 80995 67258 90661 91602 82091 89874 92336 88335 84326 103760 102480 112510 108660 94951 101020 115680 102100 122800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 133660000 26114 71 24526 48975;48976;48977 39486;39487;39488;39489 39487 4 9606 Homo sapiens 0.017481800400219072 SYGRPPPDVEGMTSLK Acetyl (Protein N-term) 1774.856 0.85598488 539 J3KP15;Q53FN0;A0A024R8U5;Q01130;J3QL05;Q8NAK9;Q01130-2;B3KX15;Q6NXQ0;Q8N220;B3KVY2;B3KUF7 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 yes no 1 0 1 5 0 1 52.963 53.035 3 2.5312E-11 15020 20230619_1885_Aki_TMTPro18x_K_F5 42.257 20.498 105300 73661 92283 97911 81814 108680 102660 106060 115710 126960 127260 116540 137790 118500 122550 142610 142250 144180 97179 67678 94727 97020 86556 108950 102750 109060 117660 126870 130410 118920 139600 123460 126080 142950 135930 136920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 480690000 26115 539 24527 48978 39490 39490 1 9606 Homo sapiens -0.00044886824707646156 SYGRPPPDVEGMTSLK Acetyl (Protein N-term);Oxidation (M) 1790.8509 0.85089951 539 J3KP15;Q53FN0;A0A024R8U5;Q01130;J3QL05;Q8NAK9;Q01130-2;B3KX15;Q6NXQ0;Q8N220;B3KVY2;B3KUF7 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 yes no 1 1 1 4 1 1 1 46.085 46.162 3 1 NaN NaN 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 63305000 26116 539 24527 48979;48980 0 9606 Homo sapiens -0.012891906873392145 SYGSTASVR Unmodified 926.44576 0.44575938 4202 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 yes yes 0 0 0 7 0 1 31.877 31.97 2 0.0039129 6128 20230619_1887_Aki_TMTPro18x_K_F7 93.162 64.634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26117 4202 24528 48981 39491 39491 1 9606 Homo sapiens -0.020405665216799207 SYIEGYVPSQADVAVFEAVSSPPPADLCHALR Unmodified 3444.666 0.66600585 271 A0A024R3W7;P24534;C9JZW3;F2Z2G2 EEF1B2 Elongation factor 1-beta yes no 0 0 0 7 0 1 63.454 63.486 3 2.0878E-15 19427 20230619_1887_Aki_TMTPro18x_K_F7 131.09 122.47 32362 15993 40985 31002 23733 26373 47444 25512 35273 44347 12622 21986 53414 36353 41544 59012 42520 50635 29916 14794 40611 30016 26583 26985 46032 26686 35850 43143 15896 23815 52613 38282 42603 58404 40730 48152 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 912800000 26118 271 24529 48982 39492 39492 1 9606 Homo sapiens 0.04145949230542101 SYIEYQLTPTNTNR Unmodified 1698.8213 0.82131394 1696 A0A7P0T8Z7;A0A7P0Z4A2;A0A7P0Z4A5;A0A7P0T8D4;B2RAU5;A0A7P0T8S8;A0A7P0T8Z2;A0A7P0T8C7;Q9Y5X1;B3KXH8;A0A7P0TBI9;Q59ES5;O95061 SNX9;WISP Sorting nexin;Sorting nexin-9 yes no 0 0 0 7 0 1 50.631 50.713 2 0.049224 13903 20230619_1887_Aki_TMTPro18x_K_F7 69.979 56.073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26119 1696 24530 48983 39493 39493 1 9606 Homo sapiens -0.00014386641146302281 SYIQGGRPFTK Unmodified 1252.6564 0.65642086 1591 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A669KAV7;O95785-4;O95785-3;A0A2R8YFV2;O95785;B3KR89;O95785-2 WIZ Protein Wiz yes no 0 0 1 5 0 1 43.194 43.275 3 0.025853 10917 20230619_1885_Aki_TMTPro18x_K_F5 61.48 48.053 62802 51143 60465 72391 69704 71101 74825 66651 73824 72399 75723 63675 72699 61197 71373 81871 72283 72537 58051 46993 61826 71307 71746 71895 75101 68591 75348 72606 77403 65026 74223 64301 72711 81389 69153 68994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62710000 26120 1591 24531 48984 39494 39494 1 9606 Homo sapiens 0.04019890800373105 SYISEETR Unmodified 983.45599 0.45598972 3001 G1UI16;Q29RF7;B3KMN2;Q96DB6 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 0 2 0 1 36.729 36.787 2 0.0076677 8419 20230619_1881_Aki_TMTPro18x_K_F2 106.94 84.111 98312 73269 90300 99269 112600 119770 102310 107230 128960 123890 125270 128870 132820 101150 104150 133720 144020 130960 90795 67313 92774 98349 114950 119260 104590 110840 129760 124470 129010 129660 133920 107020 108770 133600 137320 124460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145320000 26121 3001 24532 48985 39495 39495 1 9606 Homo sapiens -0.036400035870883585 SYKPVFWSPSSR Unmodified 1439.7197 0.7197494 2081 A8K5W7;Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 1 6.5 0.5 1 1 50.9 50.977 3 0.0025874 14321 20230619_1886_Aki_TMTPro18x_K_F6 78.529 61.955 163020 142160 154850 158390 164130 188030 190220 181510 196040 119570 117820 97560 109880 84310 155660 117210 106790 79533 150740 130280 158170 159070 170490 187730 190390 184230 196020 123610 124210 99735 114490 89144 154560 115300 102460 76040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100150000 26122 2081 24533 48986;48987 39496 39496 1 9606 Homo sapiens 0.017478315176049364 SYLMTNYESAPPSPQYK Unmodified 1974.9033 0.90332901 899 A0A090N7V5;O75223;M0QZK8;B3KMN7;B8ZZK2;H7BZK5 C7orf24;GGCT Gamma-glutamylcyclotransferase yes no 0 0 0 1 0 1 54.987 54.987 3 0.034193 16436 20230619_1880_Aki_TMTPro18x_K_F1 46.162 34.247 19086 14626 14177 14756 16794 19664 27941 29728 41687 22451 23374 27764 30472 24258 23410 33924 26532 37373 17604 13398 14866 14978 17578 19739 27915 29458 40889 23270 25175 27841 30540 25660 24164 34090 25431 35421 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18331000 26123 899 24534 48988 39497 39497 1 9606 Homo sapiens -0.04512652344374146 SYLPQIS Unmodified 806.41742 0.41741937 4544 Q9HB07;F8VR84;Q8WYI2;F8VQQ3;Q96CT6;H3BPH3 C12orf10;MST024 UPF0160 protein MYG1, mitochondrial yes no 0 0 0 7 0 1 56.981 57.036 2 0.050245 16586 20230619_1887_Aki_TMTPro18x_K_F7 86.113 71.7 65524 39357 58041 57493 65098 52119 68568 70793 74937 66500 73822 59834 76819 62554 62568 79104 60270 71458 60430 36225 59662 56518 67012 53572 69141 70903 75915 67235 75817 61233 77598 65323 63846 78751 57766 67912 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73276000 26124 4544 24535 48989 39498;39499 39499 2 9606 Homo sapiens 0.006467355690347176 SYLSGGAGAAGGGGADPGNK Unmodified 1662.7598 0.75977631 3502 P25490;H0YJU4;H0YJV7 YY1 Transcriptional repressor protein YY1 yes no 0 0 0 6 0 1 44.094 44.186 3 4.1358E-16 11329 20230619_1886_Aki_TMTPro18x_K_F6 119.76 103.62 231390 149870 198110 216920 286330 303180 278900 253360 322150 299900 312080 309390 325990 249470 270300 312900 361530 310550 213430 137880 205470 214560 290250 298840 282820 263500 325370 300970 321210 311610 329530 262800 281080 313170 344670 295180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 344340000 26125 3502 24536 48990 39500 39500 1 9606 Homo sapiens -0.045093183404333104 SYLSGMPECK Unmodified 1170.5049 0.50493052 853 Q96CW1;Q96CW1-2;A0A087WY71;B4E304;E9PFW3;B4DNB9;C9JPV8;C9JGT8;B4DJB1;C9JJD3;H7C4C3;B4DFM1;C9JTK4;B4DTI4;B7Z4N2 AP2M1 AP-2 complex subunit mu yes no 0 0 0 7 0 1 49.517 49.601 2 1.0242E-06 13397 20230619_1887_Aki_TMTPro18x_K_F7 138.66 116.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26126 853 24537 48991 39501 39501 1 9606 Homo sapiens -0.07350174614020943 SYLYFEEK Unmodified 1077.5019 0.50187728 2095 A8K6T5;Q9UBL3-3;Q9UBL3;F5H8F7;B4DPT1;Q9UBL3-2;H0YBF6;B4DEM3 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes no 0 0 0 5.5 0.5 1 1 55.474 55.544 2 0.0024793 16278 20230619_1886_Aki_TMTPro18x_K_F6 135.83 92.961 63174 47831 65354 71552 56734 71903 68730 68484 75894 79721 90742 81994 84160 80329 77129 95250 92247 100230 58404 43991 66127 70283 60002 72556 68859 70516 77494 80040 92049 83142 85836 83677 79494 95701 88171 95120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85263000 26127 2095 24538 48992;48993 39502 39502 1 9606 Homo sapiens -0.03377358404873121 SYLYFTQFK Unmodified 1195.5914 0.59136099 4314 Q969H8;M0QXF7;M0QYN0 MYDGF Myeloid-derived growth factor yes no 0 0 0 5 0 1 61.919 61.967 3 7.2271E-07 18773 20230619_1885_Aki_TMTPro18x_K_F5 136.99 88.548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26128 4314 24539 48994 39503 39503 1 9606 Homo sapiens 0.0013889627450680564 SYLYQLQQEAPHPR Unmodified 1728.8584 0.85836815 1386 P15882;P15882-3;A0A2X0SFY7;A0A494C0V1;A0A494C1D3 CHN1 N-chimaerin yes no 0 0 0 8 0 1 49.683 49.756 3 3.0291E-29 13406 20230619_1888_Aki_TMTPro18x_K_F8 214.47 195.85 49960 43648 50421 53886 46423 51389 54795 45198 65585 64213 60603 62884 71802 56151 56825 65581 70413 68416 46220 40037 51143 53542 48771 52025 55081 47155 66029 63857 62905 63646 72194 58675 58842 65887 67225 64959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139200000 26129 1386 24540 48995 39504 39504 1 9606 Homo sapiens 0.02309329695276574 SYNDELQFLEK Unmodified 1384.6511 0.65106071 4728 Q9Y3I0;B4DNA0;B4DNG5;B4DXF1 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 4 0.816 1 1 1 60.377 60.405 2;3 1.7529E-06 18465 20230619_1883_Aki_TMTPro18x_K_F4 156.01 108.45 215530 182290 220330 235240 207800 243250 238800 238410 251260 273750 259960 268410 295280 243750 268900 311700 271760 300600 199370 167300 223340 233310 217730 245210 239440 244850 255810 274560 267950 271920 298920 255870 274300 311400 260190 285520 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 699070000 26130 4728 24541 48996;48997;48998 39505;39506;39507 39506 3 9606 Homo sapiens -0.025878775727733228 SYNPFDDDGEDEGARPAPWR Unmodified 2292.9672 0.96720291 3359 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 0 1 4 0 1 53.384 53.403 3 0.0022545 15541 20230619_1883_Aki_TMTPro18x_K_F4 61.87 57.902 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26131 3359 24542 48999 39508 39508 1 9606 Homo sapiens -0.12756200653711858 SYPDEEGPK Unmodified 1020.44 0.4400053 4243 Q8NBJ5;M0QX72;A0A8I5QKL8;A0A8I5QL08 COLGALT1 Procollagen galactosyltransferase 1 yes no 0 0 0 1.5 0.5 1 1 39.757 39.792 2 4.5038E-05 9703 20230619_1881_Aki_TMTPro18x_K_F2 164.57 127.87 117630 80917 127210 129900 178110 184310 166800 174470 186230 157530 206540 220100 207900 175340 184560 135100 233100 222550 108730 74516 129210 127810 180550 181950 169440 178410 189310 162040 211090 218930 211040 180320 190470 141490 222490 210490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77941000 26132 4243 24543 49000;49001 39509;39510 39509 2 9606 Homo sapiens -0.06939709823996054 SYPEILTLK Unmodified 1062.5961 0.59611202 2883 E5RIA2;E7EUF1;Q13822;Q13822-3;Q13822-2;B4DJD3 ENPP2 Ectonucleotide pyrophosphatase/phosphodiesterase family member 2 yes no 0 0 0 8 0 2 59.806 59.843 3 0.0027231 17637 20230619_1888_Aki_TMTPro18x_K_F8 85.676 59.162 22524 19523 23150 21176 11516 13309 14822 14350 17823 21279 20991 17159 20840 15360 16604 23318 20239 19860 20840 17886 23270 21165 12980 14093 14874 14789 18127 21002 21348 17562 21058 16334 17197 23089 19327 18901 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2393300 26133 2883 24544 49002;49003 39511;39512 39512 2 9606 Homo sapiens 0.06731780417271693 SYPGHVQPATAR Unmodified 1282.6418 0.64183343 3041 Q86VS8;H0YDM4;H0YDK4 HOOK3 Protein Hook homolog 3 yes no 0 0 0 8 0 1 30.877 30.888 3 8.3753E-05 5939 20230619_1888_Aki_TMTPro18x_K_F8 92.039 68.813 8737.6 8506.8 9937.9 8585.1 11412 11470 11637 9969.3 10800 11046 13471 17480 11489 9597.9 11722 11941 14952 14519 8098.2 7785.9 10009 8708.8 11726 11353 11695 10323 11155 11295 13638 17168 11801 10282 12094 12106 14272 13764 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4199100 26134 3041 24545 49004 39513 39513 1 9606 Homo sapiens 0.011818186522077667 SYPQDDHSNLTR Unmodified 1431.6379 0.63787026 1522 A0A3B3ITR6;O95363 FARS2 Phenylalanine--tRNA ligase, mitochondrial yes no 0 0 0 3 0 1 32.406 32.479 3 4.4834E-25 6590 20230619_1882_Aki_TMTPro18x_K_F3 230.06 181.77 10291 10073 11722 11602 14232 15668 13773 14892 17850 15904 17834 21630 19497 15968 14833 22026 20355 21824 9538.3 9229.5 11826 11648 14573 15518 14042 15289 17950 16193 18390 21503 19626 16975 15511 22003 19432 20725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22799000 26135 1522 24546 49005 39514 39514 1 9606 Homo sapiens -0.060683156321374554 SYPSLTTK Unmodified 895.4651 0.46509784 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 1.5 0.5 1 1 45.953 45.994 2 0.00056982 12690 20230619_1880_Aki_TMTPro18x_K_F1 161.02 93.263 170000 139160 158890 167130 187790 222980 212970 195430 247820 162860 160390 141340 142310 109990 186640 161690 172860 131750 157110 127640 162870 167210 193620 220550 214200 200680 246730 165860 167860 143520 147890 117250 188100 160070 165240 125610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 188770000 26136 2436 24547 49006;49007 39515;39516 39515 2 9606 Homo sapiens 0.013183897692329083 SYQDPSNAQFLESIR Unmodified 1753.8271 0.8271276 3993 Q53FE8;Q9UNZ2;Q9UNZ2-5;Q53FF5;F2Z2K0;Q9UNZ2-6;Q9UNZ2-4 NSFL1C NSFL1 cofactor p47 yes no 0 0 0 5.5 0.5 2 2 55.294 55.364 2;3 9.6671E-19 16180 20230619_1886_Aki_TMTPro18x_K_F6 162 141.88 53824 47601 57143 59367 48982 61080 67577 60222 78662 74999 63242 61344 68404 56186 57136 76451 60399 70705 49820 43665 57682 59015 52073 61601 67376 61993 78910 74606 65817 62724 69108 59217 58592 76118 57830 67179 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 189840000 26137 3993 24548 49008;49009;49010;49011 39517;39518 39518 2 9606 Homo sapiens -0.019632881294910476 SYQEGLAR Unmodified 922.45084 0.45084476 1698 A0A7P0T8J7;A2A2Q9;A0A7P0TA70;Q9Y312 AAR2 Protein AAR2 homolog yes no 0 0 0 3.5 0.5 1 1 35.58 35.632 2 0.0014822 7778 20230619_1883_Aki_TMTPro18x_K_F4 141.93 99.702 62260 40300 60269 58593 73717 83335 65871 64080 88855 66315 80286 79146 85094 80278 62727 66638 93255 82488 57479 37077 61579 57965 75358 81921 67575 66852 88808 67378 82942 79793 85715 82033 65875 68078 88856 78219 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80951000 26138 1698 24549 49012;49013 39519 39519 1 9606 Homo sapiens -0.013482626590416658 SYQFWDTQPVPK Unmodified 1494.7143 0.71432967 1670 P30419;A0A7I2V539;Q96HI4;P30419-2;A0A7I2V3X4;A0A7I2V3U5;A0A7I2V4Y5;K7EN82;B7Z8J4 NMT1 Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase yes no 0 0 0 1 0 1 58.25 58.25 3 0.00064697 17799 20230619_1880_Aki_TMTPro18x_K_F1 73.466 54.842 63421 56759 68984 76297 64655 77001 77672 82371 102700 74024 84808 83750 91918 78942 86023 98045 94786 108840 58721 52105 69606 75447 67915 77902 78337 83556 102390 75611 88159 84486 93330 82612 88133 98780 90703 103210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69080000 26139 1670 24550 49014 39520 39520 1 9606 Homo sapiens -0.013238920648745989 SYQGELK Unmodified 823.40758 0.40758296 2867;2868 E5KND5;Q96RP9;Q96RP9-2;C9IZ01;D3DNL3;F8WAU4;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 0 5 0 1 41.04 41.128 2 0.016609 10005 20230619_1885_Aki_TMTPro18x_K_F5 114.5 2.3264 192990 110650 229910 233490 284980 282630 290270 302840 300440 214160 321930 355140 314160 284860 291660 172040 386680 337460 178400 102410 231330 226180 291370 282340 292720 305610 305910 225530 329190 351490 319990 290270 301490 184400 368720 318950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65939000 26140 2867;2868 24551 49015 39521 39521 1 9606 Homo sapiens -0.011184524363216042 SYQITEK Unmodified 867.4338 0.43379771 3315 O75691 UTP20 Small subunit processome component 20 homolog yes yes 0 0 0 5.5 0.5 1 1 42.431 42.514 2 0.0026228 10561 20230619_1886_Aki_TMTPro18x_K_F6 123.98 13.176 34560 20974 35413 38604 42350 49531 35271 38499 41008 34714 49881 51338 50761 38124 43980 36697 55804 52485 31912 19363 36023 37637 43279 48965 36179 39994 41776 35802 50801 50907 51425 39722 45448 37808 53255 49695 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18617000 26141 3315 24552 49016;49017 39522;39523 39523 2 9606 Homo sapiens -0.005221832648544478 SYSDPPLK Unmodified 905.44945 0.44944778 470 A0A024R7T3;P52597;B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 0 0 5.5 0.5 2 2 44.107 44.192 2;3 0.002215 11377 20230619_1886_Aki_TMTPro18x_K_F6 130.27 84.641 292190 215020 257230 271690 325310 348100 353340 350120 387840 316250 359230 314270 332430 246970 301820 329400 342960 280310 269740 197410 265360 270740 333250 346230 355600 356540 391730 321430 368420 317100 338470 261420 309850 326900 327310 266990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1020699999.9999999 26142 470 24553 49018;49019;49020;49021 39524;39525 39525 2 9606 Homo sapiens -0.007058967478087652 SYSEDDIHR Unmodified 1120.4785 0.47851608 2661;881;2415 Q96MZ5;A0A087X0Q1;Q7Z739;Q8NA80;A0A024R7W5;B4DPX9;A0A087WY31;Q658Z6;Q8N3V9;B4DT65;B3KTL8;Q9BYJ9;B5BU99;Q9Y5A9;Q9Y5A9-2 YTHDF3;DKFZp451J085;DKFZp451A052;YTHDF1;YTHDF2 YTH domain-containing family protein 3;YTH domain-containing family protein 1;YTH domain-containing family protein 2 no no 0 0 0 2.5 1.12 1 1 1 1 32.02 32.07 3 1.368E-43 6784 20230619_1880_Aki_TMTPro18x_K_F1 280.9 248.68 70051 60309 66556 66249 82404 76365 75183 77199 88658 78069 81944 84131 83364 73275 73948 74549 95630 82197 64769 55261 68115 66585 84055 76532 76648 78818 89286 79051 84461 84738 84630 76010 76551 75334 91195 78040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 395620000 26143 881;2415;2661 24554 49022;49023;49024;49025 39526;39527 39526 2 9606 Homo sapiens -0.07690404189497713 SYSGENTASAIAR Unmodified 1325.6212 0.62115757 4078 Q5VW36;B3KNV9 FOCAD Focadhesin yes no 0 0 0 5 0 1 37.754 37.846 2 8.1618E-27 8628 20230619_1885_Aki_TMTPro18x_K_F5 228.12 199.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26144 4078 24555 49026 39528 39528 1 9606 Homo sapiens -0.028628165180862197 SYSPSDLVELVAR Unmodified 1434.7355 0.73545904 4538 Q9H9T3-2;Q9H9T3;B4DXV1;B4DPB7;B4DKA4;Q9H9T3-4;Q9H9T3-5 ELP3 Elongator complex protein 3 yes no 0 0 0 7 0 1 62.498 62.533 2 1.1572E-05 18938 20230619_1887_Aki_TMTPro18x_K_F7 133.85 122.14 86315 66149 76692 90395 82314 94185 83453 95162 108720 102690 100100 115450 125280 104170 111240 125950 127170 137700 79708 60771 78872 89318 85180 94948 84893 97329 109020 103780 104310 116220 126400 109000 114320 126820 121590 130630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103550000 26145 4538 24556 49027 39529 39529 1 9606 Homo sapiens 0.03548073243996441 SYSPYDMLESIR Oxidation (M) 1475.6602 0.66024519 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;A6NMY6;H0YL33;H0YM50;B3KRQ1;H0YN28 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 1 0 5 0.816 1 1 1 53.04 53.086 2 0.00028172 15057 20230619_1885_Aki_TMTPro18x_K_F5 110.53 96.598 284070 195930 251610 330130 325280 354790 304360 311090 332300 428830 492040 503560 485140 451970 402790 469420 463660 571940 262170 180550 259870 322330 331540 355730 309100 324030 343680 429220 496980 505950 491630 468800 414800 476990 443790 541750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 585480000 26146 368 24557 49028;49029;49030 39530;39531;39532 39531 218 3 9606 Homo sapiens -0.0585585227872798 SYSPYDMLESIR Unmodified 1459.6653 0.66533057 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;A6NMY6;H0YL33;H0YM50;B3KRQ1;H0YN28 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 7 0.816 1 1 1 61.954 61.993 2 4.6089E-24 18687 20230619_1887_Aki_TMTPro18x_K_F7 261.03 223.48 1720000 1053900 1443800 1647600 1419400 2045200 1723700 1621900 1861900 2698300 2695000 3179400 2946600 2620700 2363700 2903400 2912900 3380900 1585800 970700 1491200 1618900 1488900 2026300 1725100 1715300 1925800 2682700 2739600 3184000 2972400 2736600 2447300 2938300 2785000 3204400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3876399999.9999995 26147 368 24557 49031;49032;49033 39533;39534 39534 2 9606 Homo sapiens -0.04611548416119149 SYSPYDMLESIRK Unmodified 1587.7603 0.76029359 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;A6NMY6;H0YL33;H0YM50;B3KRQ1;H0YN28 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 1 2 0.816 1 1 1 58.902 58.916 3 4.9385E-28 18170 20230619_1881_Aki_TMTPro18x_K_F2 252.44 231.51 829930 850550 849220 722340 915360 848790 808870 889980 731360 1093400 1096300 941020 1059400 847790 1205700 1156400 878220 1003100 768770 777330 860950 742960 941060 850940 820360 911180 765780 1088600 1105400 959740 1088300 894100 1205200 1148800 844310 953880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 447400000 26148 368 24558 49034;49035;49036 39535;39536 39536 2 9606 Homo sapiens -0.010076149449332661 SYSPYDMLESIRK Oxidation (M) 1603.7552 0.75520821 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;A6NMY6;H0YL33;H0YM50;B3KRQ1;H0YN28 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 1 1 8 0 1 50.527 50.603 3 0.022709 13796 20230619_1888_Aki_TMTPro18x_K_F8 81.803 63.346 224970 219620 219030 223540 314890 226480 240840 227500 201580 274770 330250 274230 266050 223290 309090 284180 294600 268020 208230 201020 224270 225630 316420 229300 246060 233660 213010 274940 329710 276900 275490 235220 312610 283790 281830 254840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 386910000 26149 368 24558 49037 39537 39537 218 1 9606 Homo sapiens -0.022519188075648344 SYSSGGEDGYVR Unmodified 1275.5368 0.53675924 1678 Q13347;A0A7I2YQF8;Q5U0F4;Q53HU7;A0A7I2V3U3;A0A7I2V5V8;A0A7I2YQU2;A0A7I2YQC8;A0A7I2YQT9;A0A7I2V4C2;Q9P1D9 EIF3I Eukaryotic translation initiation factor 3 subunit I yes no 0 0 0 2.5 0.5 1 1 36.861 36.918 2 8.775499999999999E-32 8320 20230619_1882_Aki_TMTPro18x_K_F3 287.77 273.65 251030 189140 215680 219600 249930 265240 255380 248160 293800 333390 362180 358380 391040 311970 293890 426190 408960 354630 231740 173480 222560 219930 257080 264440 258410 256950 300060 333070 369490 361280 393500 329330 307620 422050 389800 337780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 679750000 26150 1678 24559 49038;49039 39538;39539 39539 2 9606 Homo sapiens -0.08998767334878721 SYSTTYEER Unmodified 1134.4829 0.48293275 3940 Q71UA6;Q59ES3;Q15758;M0QXM4;M0QX44 SLC1A5 Amino acid transporter;Neutral amino acid transporter B(0) yes no 0 0 0 2 0 1 35.224 35.281 2 0.00015489 7804 20230619_1881_Aki_TMTPro18x_K_F2 146.69 127.91 18906 14137 18224 21882 18443 24337 24756 22112 30564 28986 32844 39317 36671 27064 24775 38210 38931 38507 17467 13008 18605 21478 19347 24353 24764 22941 30890 29239 33784 39016 36725 28920 26257 38192 37110 36572 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57561000 26151 3940 24560 49040 39540 39540 1 9606 Homo sapiens -0.07892939766566087 SYSVGASGSSSR Unmodified 1143.5156 0.51562986 2481 Q8N684-3;Q8N684;Q8N684-2;B4DGF8;F5H669 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 0 0 0 6 0.816 1 1 1 32.168 32.238 2 1.3439999999999998E-40 6198 20230619_1887_Aki_TMTPro18x_K_F7 309.94 285.17 55967 23193 69741 67235 88317 111980 74249 94298 89281 54430 87025 105060 82961 78821 88756 32855 105390 96179 51697 21645 69979 64768 89989 109270 76208 96420 89865 58729 89359 103340 85141 79764 90741 37497 100610 90714 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 41921000 26152 2481 24561 49041;49042;49043 39541;39542;39543 39543 3 9606 Homo sapiens -0.050387326436975854 SYSYVCGISSK Unmodified 1249.5649 0.56488824 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 2 0 1 48.988 49.053 2 8.029300000000001E-25 13995 20230619_1881_Aki_TMTPro18x_K_F2 223.31 212.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26153 1182 24562 49044 39544 39544 1 9606 Homo sapiens -0.0499116067912837 SYTIAVASLGK Unmodified 1108.6128 0.61282471 1530 A0A6Q8PFA9;Q53Y83;Q53HF3;A0A3B3IUC4;P06280;A0A6Q8PGG0 GLA Alpha-galactosidase A yes no 0 0 0 3 0 1 55.95 55.989 3 0.018076 16761 20230619_1882_Aki_TMTPro18x_K_F3 62.166 47.959 38660 29035 36145 35231 39121 41840 43421 41670 51605 45950 37313 43360 51328 42799 41515 58380 56234 66489 35710 26644 36967 35169 40519 41809 43769 42690 51564 46149 39609 44121 51496 45018 43296 58806 53733 63028 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57615000 26154 1530 24563 49045 39545 39545 1 9606 Homo sapiens 0.062862813032325 SYTLDSLGNPSAYR Acetyl (Protein N-term) 1584.742 0.74200098 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 1 0 0 4.5 0.5 1 1 60.33 60.357 2 9.0314E-29 18433 20230619_1883_Aki_TMTPro18x_K_F4 148.9 141.25 34265 28258 30509 34473 34669 51562 40455 41574 50025 18011 18789 18132 21457 15012 24606 19537 19459 18533 31657 25923 31414 34514 35965 50565 40721 42522 49068 19535 20873 18324 21952 15842 24652 19521 18661 17617 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138860000 26155 1958 24564 49046;49047 39546 39546 1 9606 Homo sapiens -0.026980335952657697 SYVDLLK Unmodified 836.46437 0.46436956 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;A0A8V8TR41 NAA15;NARG1 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 7.5 0.5 1 1 56.689 56.746 2 0.063275 16506 20230619_1888_Aki_TMTPro18x_K_F8 80.229 30.882 78051 68324 63620 80648 62755 92198 77313 77408 90624 102970 87186 89238 90512 80942 82958 103320 93004 99360 72092 62643 65950 80557 65878 91969 77517 80778 91523 102270 89775 90907 91952 84945 85162 103180 88932 94392 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 456020000 26156 2297 24565 49048;49049 39547 39547 1 9606 Homo sapiens 0.039595951201818025 SYVTMTATK Unmodified 1000.4899 0.48993238 228 A0A024R394;Q9UHD1;A0A024R3C3;Q9UHD1-2;E9PHZ2;Q9NZ93 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes no 0 0 0 2 0 1 46.036 46.116 2 1.3051E-06 12644 20230619_1881_Aki_TMTPro18x_K_F2 156.35 103.18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26157 228 24566 49050 39548 39548 1 9606 Homo sapiens -0.010292984197008082 SYVTTSTR Unmodified 913.45051 0.45051041 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;A0A1B0GVG8 VIM;HEL113 Vimentin yes no 0 0 0 5.17 2.27 1 1 1 1 1 1 32.887 32.931 2 0.00011023 6752 20230619_1885_Aki_TMTPro18x_K_F5 178.99 148.38 341990 167580 387550 317280 1015200 1126400 594720 729430 675500 427850 668830 729470 592190 579970 691120 255700 707220 600420 315790 154960 398940 318140 993560 1067900 626540 763350 682730 458370 683840 721130 611980 585980 699380 283060 675770 567020 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 5999099999.999999 26158 3414 24567 49051;49052;49053;49054;49055;49056 39549;39550;39551;39552;39553;39554 39551 6 9606 Homo sapiens -0.009676823789050104 SYYFPVK Unmodified 902.4538 0.45380487 3931 Q15393;A8K6V3;B3KQH1;B3KM77;Q15393-3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 2.5 0.5 1 1 54.266 54.301 2 0.0079067 16044 20230619_1882_Aki_TMTPro18x_K_F3 126.54 83.72 384930 323120 338040 341200 430880 554200 465320 438250 533760 126340 115550 98444 107540 91415 237900 130620 132710 101030 355630 296000 348870 345940 441930 541350 468800 447330 521900 144410 138110 101350 116340 96583 233210 129330 127770 96391 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 286080000 26159 3931 24568 49057;49058 39555;39556 39556 2 9606 Homo sapiens -0.0013238753424502647 SYYNVVLQNILETENEYSK Unmodified 2305.1114 0.11140753 785 Q14155-5;A0A8V8TQ72;Q14155-1;A0A2R8YG42;B7Z6G2;B1ALK7;A0A024RDY9;Q14155;Q14155-3;A0A2X0SF98;Q14155-2;Q14155-6;Q5W9H1;Q5ZEZ3;E7EUY6 ARHGEF7;KIAA0142 Rho guanine nucleotide exchange factor 7 yes no 0 0 0 7 0 1 65.081 65.108 3 0.016666 20105 20230619_1887_Aki_TMTPro18x_K_F7 49.188 39.773 16162 15158 12994 15493 13778 13950 12770 12711 15872 15787 15759 17750 13966 15052 20998 19237 20815 21806 14934 13876 13485 15603 14226 14210 13035 13162 15994 15852 16124 17835 14670 15826 21209 19412 19924 20680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60561000 26160 785 24569 49059 39557 39557 1 9606 Homo sapiens 0.011056280537104612 SYYSVQTAEWQAHPLYGSRPTLPR Unmodified 2806.3827 0.3827122 4245 Q8NBM8;B3KXF9;E7EVZ5 PCYOX1L Prenylcysteine oxidase-like yes no 0 0 1 4 0 1 51.388 51.416 4 4.024E-34 14640 20230619_1883_Aki_TMTPro18x_K_F4 203.71 185.56 40450 33121 36321 41083 37776 43698 43245 37872 40791 58085 56817 52397 56799 49297 45923 59420 56564 56014 37372 30390 37294 40861 39281 43858 43215 39648 42408 57424 57500 53350 57458 51487 47552 59322 54013 53241 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101580000 26161 4245 24570 49060 39558 39558 1 9606 Homo sapiens 0.051776154787603446 TAAAAAEHSQR Unmodified 1111.537 0.53703401 2361 B3KNN7;B4DEB0;O43242;Q8N9M2;Q6IBN0;B4DV84;B4DPM7 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 3 0 1 22.998 23.151 3 2.7639E-09 3770 20230619_1882_Aki_TMTPro18x_K_F3 152.67 127.63 46070 44707 62388 57819 75025 88453 66502 71821 70658 56190 71458 71861 59465 54496 87206 39757 88931 66414 42774 41013 62189 57707 76697 86704 67709 74072 71722 58122 72818 71608 62420 56022 88005 41843 84916 62880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58516000 26162 2361 24571 49061 39559 39559 1 9606 Homo sapiens -0.014273028243451336 TAAALAPASLTSAR Unmodified 1299.7147 0.71466402 1230 Q9UQ35;A0A140VK53;O60382;I3L3Q8 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 3 0 1 47.194 47.273 2 0.074754 12898 20230619_1882_Aki_TMTPro18x_K_F3 55.401 39.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26163 1230 24572 49062 39560 39560 1 9606 Homo sapiens 0.07679527654977392 TAAANAAAGAAENAFR Unmodified 1475.7117 0.71170391 3224 Q6FHJ5;O14828-2;O14828 SCAMP3 Secretory carrier-associated membrane protein 3 yes no 0 0 0 7.5 0.5 2 2 49.66 49.738 2;3 2.6266E-14 13419 20230619_1888_Aki_TMTPro18x_K_F8 186.56 169.62 341730 279580 278370 276630 302370 359730 297360 311510 469810 219380 242570 243330 223460 193430 261770 239370 266650 246370 315510 256000 288400 280880 312770 356400 305310 319060 458930 227920 258780 244360 230650 203590 265650 240280 254940 234010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 448080000 26164 3224 24573 49063;49064;49065;49066 39561;39562 39562 2 9606 Homo sapiens -0.007123474698573773 TAADELEAFLGGGAPGGR Unmodified 1687.8166 0.81656291 3969 Q3YEC7;Q3YEC7-2;B3KXX7 RABL6 Rab-like protein 6 yes no 0 0 0 4.5 0.5 1 1 63.82 63.828 3 1.1018E-13 19934 20230619_1883_Aki_TMTPro18x_K_F4 150.76 133.82 12886 9764 11924 12232 11723 14213 13741 13993 18625 14742 19458 17183 19476 17023 16511 21225 17912 22732 11903 8962.3 12194 12178 12267 14213 13890 14330 18709 14944 19905 17352 19739 17787 16947 21330 17158 21557 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30256000 26165 3969 24574 49067;49068 39563;39564 39563 2 9606 Homo sapiens 0.0001672921603130817 TAAEDAIR Unmodified 845.4243 0.42429566 2142;4410 A8K9U0;Q9BWF3;E9PB51;Q9BWF3-4;D6R9K7;J3QRR5;Q9BWF3-3;Q9BWF3-2;Q9BQ04;E9PLB0;E9PM61;U3KQD5 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B no no 0 0 0 1.5 0.5 1 1 34.459 34.488 2 0.0016577 7456 20230619_1881_Aki_TMTPro18x_K_F2 139.14 64.421 176510 89435 210800 214700 284530 291800 220900 263110 258700 183080 282420 272830 275960 237590 236060 119210 297990 255770 163090 83023 212360 207280 287790 288330 227770 268520 262040 192160 288240 271570 279970 240130 243460 129790 284230 241640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 314240000 26166 2142;4410 24575 49069;49070 39565;39566 39566 2 9606 Homo sapiens -0.0045995155038554 TAAEEALRK Unmodified 987.53491 0.53490874 558 A0A024R972;P11047 LAMC1 Laminin subunit gamma-1 yes no 0 0 1 6 0 1 38.601 38.683 3 0.0010588 9003 20230619_1886_Aki_TMTPro18x_K_F6 99.013 54.566 128960 87699 108100 117770 148580 145740 142090 146220 188280 165390 162620 137740 168070 105730 121120 163090 158910 115740 118960 80594 112200 116810 150940 145280 145020 149780 188160 165310 168040 140090 168910 113270 126290 160200 151380 110590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100840000 26167 558 24576 49071 39567 39567 1 9606 Homo sapiens 0.04064268437844021 TAAELLQSQGSQAGGSQTLK Unmodified 1974.0018 0.0017974991 3875 Q14141;Q541S4;Q548C9;B1AMS2;Q6B514;B4DZW0;Q8NFH9;Q14141-2;Q14141-4;B4DPT4;Q6NT82;B4E049 SEPT6 Septin-6 yes no 0 0 0 7.5 0.5 1 1 51.794 51.87 3 3.6208E-16 14427 20230619_1887_Aki_TMTPro18x_K_F7 156.08 138.8 59800 52590 56059 76268 55324 62778 68161 62279 74938 91256 77024 82044 91836 82783 65125 96086 103640 101180 55293 48322 57376 74846 57888 64480 68180 64478 76156 90381 79584 83698 92064 86077 68986 96533 98771 96054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 701630000 26168 3875 24577 49072;49073 39568 39568 1 9606 Homo sapiens 0.05375667225030156 TAAENDFVTLKK Unmodified 1335.7034 0.70343063 2787 CON__P35908v2;CON__P35908;P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 1 8 0 1 49.67 49.743 3 0.0021004 13405 20230619_1888_Aki_TMTPro18x_K_F8 80.905 57.101 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26169 2787 24578 49074 39569 39569 1 9606 Homo sapiens 0.04900705560839924 TAAENVCYTLINVPMDSEPPSEISLK Acetyl (Protein N-term);Oxidation (M) 2935.3831 0.38309064 3646 P53618;E9PP73;E9PP63;E9PKQ1 COPB1 Coatomer subunit beta yes no 1 1 0 4 1 1 1 64.501 64.539 3 6.9997E-09 19979 20230619_1885_Aki_TMTPro18x_K_F5 67.239 59.793 15014 9628 13909 17696 17500 14913 15335 15421 17293 15625 18084 14502 19366 16555 16697 23705 17043 19258 13856 8886 14291 17154 17805 15303 15652 15732 17537 15753 18547 14879 19598 17381 17086 23436 16318 18330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34591000 26170 3646 24579 49075;49076 39570 39570 2333 1 9606 Homo sapiens -0.007185584893250052 TAAENVCYTLINVPMDSEPPSEISLK Acetyl (Protein N-term) 2919.3882 0.38817601 3646 P53618;E9PP73;E9PP63;E9PKQ1 COPB1 Coatomer subunit beta yes no 1 0 0 4 0.816 1 1 1 65.551 65.581 3 1.088E-08 20410 20230619_1885_Aki_TMTPro18x_K_F5 64.488 50.081 14060 13123 15142 14389 12235 14465 14004 17132 16120 17485 15629 15236 22682 15302 17142 22936 21268 22411 13021 12021 15243 14441 12993 14685 14099 17315 16302 17577 16361 15588 22639 16208 17788 22875 20317 21288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87118000 26171 3646 24579 49077;49078;49079 39571 39571 1 9606 Homo sapiens 0.005257453733065631 TAAESFK Unmodified 752.37047 0.37046918 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;A0A7P0T9D6;I3L514;Q96C96 P4HB Protein disulfide-isomerase yes no 0 0 0 5.5 0.5 1 1 41.286 41.376 2 0.0064962 10055 20230619_1885_Aki_TMTPro18x_K_F5 139.31 78.352 626860 328410 827230 760000 1154400 1193300 926950 1128200 968200 590610 1000300 1131500 833020 793540 1111400 373720 1045700 974160 579870 304590 828070 737060 1165800 1171400 949780 1142000 983610 642320 1019100 1111700 869110 807600 1117400 418460 1000600 919160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 590310000 26172 537 24580 49080;49081 39572;39573;39574 39572 3 9606 Homo sapiens -0.015621239820916344 TAAFALPVLER Unmodified 1186.671 0.67100829 2338 B7Z6D5;B3GQE6;Q96GQ7;A0A087X059 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 0 0 1.5 0.5 2 2 60.593 60.599 2;3 0.0027533 18770 20230619_1880_Aki_TMTPro18x_K_F1 106.4 77.313 86836 72666 80234 85593 80585 98088 89165 93527 92775 95679 87035 93910 101360 74860 98441 106340 99738 109070 80256 66633 82103 85553 83986 98119 89546 95900 94150 96501 90269 94767 102790 79578 100270 106480 95481 103530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 101820000 26173 2338 24581 49082;49083;49084;49085 39575;39576;39577 39576 3 9606 Homo sapiens 0.08513962948495646 TAANLVVETGQDGVQIR Unmodified 1769.9272 0.92717599 4060 Q5T3I0;Q5T3I0-3;A0A0A0MRK1;E9PAV9;A8KAG1;E9PPY4;F2Z3C6;B4DVU2;Q5T3I0-2 GPATCH4 G patch domain-containing protein 4 yes no 0 0 0 5 0 1 53.071 53.143 2 9.2254E-06 15124 20230619_1885_Aki_TMTPro18x_K_F5 106.58 64.536 21889 15462 19474 17882 20162 18861 22878 24008 16380 23938 23660 21576 29984 22900 24631 27099 22643 22403 20204 14185 19980 17890 20919 19127 22725 24158 17385 24101 24199 22073 30119 23808 25044 26898 21682 21329 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 272600000 26174 4060 24582 49086 39578 39578 1 9606 Homo sapiens 0.07300949204295648 TAAPSVRPEK Unmodified 1054.5771 0.57710791 2320 B2RDN4;Q14137;A8K3R2;A0A075B729 BOP1 Ribosome biogenesis protein BOP1 yes no 0 0 1 7.5 0.5 1 1 34.743 34.777 3 0.0029473 7230 20230619_1887_Aki_TMTPro18x_K_F7 84.06 35.42 202650 108360 204910 234330 282720 310650 247670 274860 328170 265630 313900 320130 333410 249810 276140 184480 337070 300880 187000 100370 209310 227000 286680 307260 254270 282910 329030 270720 323540 319850 336730 256870 284610 193300 321660 284680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 240640000 26175 2320 24583 49087;49088 39579;39580 39579 2 9606 Homo sapiens 0.052002438462295686 TAAPTTASAAPQGPLR Unmodified 1508.7947 0.79470526 4377 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A7E2D7 EP400 E1A-binding protein p400 yes no 0 0 0 8 0 1 40.049 40.038 3 1.1605E-05 9513 20230619_1888_Aki_TMTPro18x_K_F8 64.583 46.996 43372 26354 58812 60006 74695 65855 69196 82142 77311 53983 75205 79472 64482 68048 75884 39201 88439 78946 40159 24416 58690 57872 76007 66489 70373 82002 78112 56846 76847 79083 66794 69030 77441 42214 84430 74597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24924000 26176 4377 24584 49089 39581 39581 1 9606 Homo sapiens 0.06065969258156656 TAAQCLEHYEFLLDK Unmodified 1836.8716 0.87163495 2446 Q99459;B3KY60;B4DSH1 CDC5L Cell division cycle 5-like protein yes no 0 0 0 6 0 1 61.109 61.164 3 9.5413E-06 18613 20230619_1886_Aki_TMTPro18x_K_F6 113.69 92.452 197320 136530 148030 147240 156320 207150 194910 161800 212290 174510 169140 175460 213890 146270 186130 221170 200220 213010 181910 125190 154660 148640 163150 203840 194690 168820 213510 175840 177590 177180 215350 155960 190730 220460 191530 202350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 445490000 26177 2446 24585 49090 39582 39582 1 9606 Homo sapiens -0.01332600307659959 TAASFDECSTAGVFLSTLHCQDYR Unmodified 2735.1956 0.19556464 2052 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;Q15003-2;C9JZP1 NCAPH Condensin complex subunit 2 yes no 0 0 0 7 0 1 60.841 60.884 3 5.1615000000000004E-45 18187 20230619_1887_Aki_TMTPro18x_K_F7 240.71 237.98 30405 26774 30367 35874 25340 29373 30043 34023 36761 31701 31438 32721 36810 33913 34137 40250 42320 43524 28128 24579 30808 35391 26865 30295 30245 34378 36850 32201 32754 33230 37303 35274 35244 40509 40420 41301 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 121380000 26178 2052 24586 49091 39583;39584 39584 2 9606 Homo sapiens -0.10262532183332951 TAASGIPYHSEVPVSLK Unmodified 1754.9203 0.9202997 2337 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 8 0 1 50.362 50.438 3 1.9797E-13 13701 20230619_1888_Aki_TMTPro18x_K_F8 151.8 138.14 148010 136920 110330 143760 125480 135200 154030 151300 142070 178530 166690 185380 157760 153710 143690 178590 215220 195970 136680 125380 115660 144550 129900 137820 153270 154210 146570 179050 169610 186690 160840 160850 150490 179940 205090 186020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363550000 26179 2337 24587 49092 39585 39585 1 9606 Homo sapiens 0.07303636323740648 TAATFAR Unmodified 736.38679 0.38678794 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 7 0.816 1 1 1 34.616 34.654 2 0.0075463 7333 20230619_1888_Aki_TMTPro18x_K_F8 124.34 26.747 253890 141780 233910 252260 337900 345360 305760 320240 383040 208600 241140 230410 243940 201380 243930 168100 297220 259600 234150 130880 240930 246690 341830 341420 312400 325800 379650 217800 254180 231950 248960 207120 250520 174840 283600 245740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 235290000 26180 3647 24588 49093;49094;49095 39586;39587 39587 2 9606 Homo sapiens 0.008050019746519865 TAATSVPAYEPLDSLDR Unmodified 1804.8843 0.88430813 840 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 RBM15 Putative RNA-binding protein 15 yes no 0 0 0 3.5 0.5 1 1 55.378 55.39 2 4.4591E-18 16393 20230619_1883_Aki_TMTPro18x_K_F4 184.21 142.17 17370 15164 18340 21656 18451 24172 21521 23476 24415 25917 25960 24919 26062 20990 22647 27369 25135 28633 16075 13932 18578 21359 19267 24218 21619 24088 24780 26025 26556 25215 26426 22129 23255 27456 24049 27170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24765000 26181 840 24589 49096;49097 39588;39589 39589 2 9606 Homo sapiens 0.01406134356216171 TAAVCVAK Unmodified 818.43202 0.43202358 1172;3819 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;Q68DI0;A0A087X253;B4DWG4;A0A087WZQ6;A0A087WU93;A0A087WYD1;K7ERB2;Q10567-4;Q10567-3;Q10567-2;Q10567;C9J1E7 AP2B1;DKFZp781K0743;AP1B1 AP-2 complex subunit beta;AP complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 8 0 1 41.117 41.11 2 0.0022296 9926 20230619_1888_Aki_TMTPro18x_K_F8 130.04 95.147 51471 25816 61758 66314 71624 85291 58762 68439 72219 48162 63575 73044 65355 63094 69914 38826 89429 79285 47558 23999 62054 63789 73316 84313 60455 70531 72391 50570 65796 72622 66939 64143 71903 41779 85306 74913 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24128000 26182 1172;3819 24590 49098 39590 39590 1 9606 Homo sapiens 0.015544844455462226 TAAVWEEIVGESNDK Unmodified 1646.7788 0.77878042 3165 K7ELV2;Q96EE3;Q96EE3-1;K7EP88;K7EPZ5 SEH1L Nucleoporin SEH1 yes no 0 0 0 3.5 0.5 1 1 62.428 62.446 3 0.057851 19441 20230619_1882_Aki_TMTPro18x_K_F3 42.314 30.623 68398 62718 71924 68201 73004 90013 77903 85418 106680 74502 70392 73646 71506 69799 85344 90167 77580 86866 63320 57450 72776 68750 75990 89247 79153 87242 105520 75925 74034 74709 73680 73161 86144 90084 74368 82506 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80964000 26183 3165 24591 49099;49100 39591 39591 1 9606 Homo sapiens -0.01873781769359084 TAAYGHFGR Unmodified 978.46716 0.46716353 1192 A0A140VJP5;P31153;B4E1K2 MAT2A S-adenosylmethionine synthase isoform type-2 yes no 0 0 0 4.6 2.73 1 1 1 1 1 33.986 34.03 3 7.1437E-09 7576 20230619_1880_Aki_TMTPro18x_K_F1 180.45 132.49 497940 379190 449820 463270 528000 548850 504340 509820 534500 516950 580020 494130 535370 432350 505510 563090 590990 494190 459870 347970 462130 462110 541450 547710 510970 523640 544620 521380 590430 501050 546290 454960 519560 559770 563960 470470 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 643810000 26184 1192 24592 49101;49102;49103;49104;49105 39592;39593;39594;39595 39592 4 9606 Homo sapiens -0.022931367022806626 TAAYVNAIEK Unmodified 1078.5659 0.56587452 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;P00367-3;B3KT18;A0A804HKE0;P00367-2;P49448;A0A140VK14;Q14400;Q9BSD0;Q9UQV0 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 6 0 1 49.192 49.269 3 0.0026764 13576 20230619_1886_Aki_TMTPro18x_K_F6 79.693 30.193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26185 2542 24593 49106 39596 39596 1 9606 Homo sapiens 0.029734217520854145 TACFVEPAPDVVAVLDSVVQGTGPACER Unmodified 2943.4106 0.41064279 4738 Q9Y4D7-2;Q9Y4D7 PLXND1 Plexin-D1 yes no 0 0 0 6.5 0.5 1 1 66.326 66.359 3 0.057282 20912 20230619_1886_Aki_TMTPro18x_K_F6 38.234 35.621 0 0 0 872.12 1189.8 0 0 0 0 0 0 1518.1 1193.6 1210 0 0 858.11 0 0 0 0 793.85 1099.5 0 0 0 0 0 0 1454.5 1125.5 1191.6 0 0 806.8 0 0 0 0 1 1 0 0 0 0 0 0 1 1 1 0 0 1 0 10833000 26186 4738 24594 49107;49108 39597 39597 1 9606 Homo sapiens 0.016673895615895162 TADDPSLSLIK Unmodified 1158.6132 0.61321864 619 A0A0C4DGS1;A0A024RAD5;P39656;P39656-3;U3KQ84 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 0 4.67 0.471 1 2 54.694 54.742 2;3 1.9756E-08 15689 20230619_1885_Aki_TMTPro18x_K_F5 195.36 66.671 443430 435550 464750 477600 543740 592150 577200 615840 612500 626670 644690 683650 747040 611370 658860 682460 676700 697870 410700 398910 471660 480610 559230 590760 581250 627520 623580 634360 664730 688910 754760 636900 672630 685550 647430 662600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 572180000 26187 619 24595 49109;49110;49111 39598;39599;39600 39599 3 9606 Homo sapiens 0.040256562324202605 TADGIVSHLK Unmodified 1039.5662 0.56620887 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;B4DJ98;A0A8I5KYJ6;A0A8I5KXE2;A0A8I5KP58;A0A8I5QJM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 7.5 0.5 2 2 45.54 45.6 2;3 0.00013394 11702 20230619_1888_Aki_TMTPro18x_K_F8 123.79 59.081 318530 309940 352120 321320 386290 431040 408520 390060 524640 390590 491310 525810 470140 407990 458470 553020 535600 547480 295140 283740 355270 325230 399240 426710 414130 401350 525970 399090 504960 523870 480120 432220 471210 552790 511800 520020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7771999999.999999 26188 2389 24596 49112;49113;49114;49115 39601;39602;39603 39603 3 9606 Homo sapiens 0.048008414719333814 TADMDVGQIGFHR Unmodified 1445.6721 0.67214728 4176 Q7Z5U5;Q86WR0;Q6PK69;Q86WR0-2 CCDC25 Coiled-coil domain-containing protein 25 yes no 0 0 0 5.5 0.5 1 1 46.787 46.867 3 1.979E-11 12437 20230619_1885_Aki_TMTPro18x_K_F5 152.96 113.33 51490 36747 46621 36122 38809 43260 37114 49360 65709 41346 40695 37483 46458 35762 46464 46434 48133 42137 47536 33664 47570 36686 40964 43359 38441 49738 64259 42142 43159 38204 47223 37527 47336 46253 45996 40090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191590000 26189 4176 24597 49116;49117 39604 39604 1 9606 Homo sapiens -0.0328619074487051 TADSEVNTDQDIEK Unmodified 1563.69 0.69002499 237 A0A024R3D4;Q8ND24;E9PN76;Q8ND24-2 DKFZp547C195;RNF214 RING finger protein 214 yes no 0 0 0 1 0 1 42.856 42.856 3 8.2049E-07 11371 20230619_1880_Aki_TMTPro18x_K_F1 128.95 107.39 47304 39860 47180 50851 56345 65969 53918 59612 64930 59521 69761 57132 58222 51109 56079 48377 65815 59243 43748 36579 48102 50639 57781 65397 54867 61304 65686 60099 70750 57924 59698 52792 57553 49299 62832 56178 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93479000 26190 237 24598 49118 39605 39605 1 9606 Homo sapiens -0.06927241799712647 TAEAIIR Unmodified 772.4443 0.44430282 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B3KME6;Q6AZE1;H0Y4T4 CEP170 Centrosomal protein of 170 kDa yes no 0 0 0 4.5 0.5 1 1 38.882 38.949 2 0.01408 9091 20230619_1885_Aki_TMTPro18x_K_F5 113.1 40.747 243650 177040 220340 230050 278380 297430 273960 250930 346960 255100 290270 293120 274920 241730 259400 275610 344180 313940 224960 162600 226700 228800 284530 294580 278600 259730 346760 258980 299810 294110 280520 252840 268790 278520 328280 297880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168180000 26191 1960 24599 49119;49120 39606;39607 39607 2 9606 Homo sapiens 0.04897844180231914 TAECTQYQQILHR Unmodified 1646.7835 0.78348864 2581 B4DSR7;O75177;O75177-2 SS18L1 Calcium-responsive transactivator yes no 0 0 0 7 0 1 41.498 41.569 3 7.9617E-09 9871 20230619_1887_Aki_TMTPro18x_K_F7 168.02 148.24 115160 71301 95626 97046 118150 140210 110140 122840 206630 65033 65299 55809 60315 51894 80580 49126 69948 59247 106170 65564 99117 96433 121060 138030 114380 125080 198940 68861 73374 56993 62748 53542 80814 50087 66955 56205 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63745000 26192 2581 24600 49121 39608 39608 1 9606 Homo sapiens -0.01403176107623949 TAEECRLDRDEER Unmodified 1677.7377 0.73766066 354 A0A075B720;Q05CD9;Q05DF5;A8K8N5;A0A024R5S4;P40818;H0YM17;H0YLH2;H0YM47;H0YNL5;H0YKV1 USP8 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 8 yes no 0 0 2 1 0 1 29.227 29.227 4 4.8123E-06 5683 20230619_1880_Aki_TMTPro18x_K_F1 135.14 111.78 22043 19676 26670 22355 27126 23947 26002 36226 25066 26827 30484 35996 32772 30526 29264 34262 42154 33179 20430 18032 26679 22410 28041 24391 26298 35871 25819 27862 31162 35940 33240 31842 30553 34300 40146 31558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24244000 26193 354 24601 49122 39609 39609 1 9606 Homo sapiens -0.07409866080524807 TAEEENPEHVEIQK Unmodified 1651.7689 0.76894402 1803 A0A8Q3WK70;B3KPV5;O00566 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 yes no 0 0 0 1.5 0.5 1 1 41.166 41.205 3 6.2139E-12 10613 20230619_1880_Aki_TMTPro18x_K_F1 183.6 143.53 134850 111080 125570 147040 166080 176220 161650 163320 190980 168510 185080 176440 192220 164540 164270 189470 182680 162560 124630 101990 129070 145860 169180 175680 164130 167860 192630 170330 190400 178430 194640 171380 168680 188450 174470 154760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 277130000 26194 1803 24602 49123;49124 39610;39611 39610 2 9606 Homo sapiens -0.030869697747903047 TAEELMNFSK Oxidation (M) 1184.5383 0.53833914 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 1 0 4.33 0.471 2 1 49.636 49.685 2;3 0.0008784 13640 20230619_1885_Aki_TMTPro18x_K_F5 111.61 67.837 125970 102030 106220 134280 123660 136050 130130 121230 145900 150990 168320 152510 166070 146000 147940 194560 161770 177850 116320 93678 109980 132910 127290 137100 131310 125720 148650 151070 171420 154690 168740 153350 151790 193660 154760 169040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 188800000 26195 3621 24603 49125;49126;49127 39612;39613 39613 2304 2 9606 Homo sapiens -0.04654849570488295 TAEELMNFSK Unmodified 1168.5434 0.54342452 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 6 0.816 1 1 1 56.601 56.667 3 8.7074E-05 16415 20230619_1887_Aki_TMTPro18x_K_F7 132.32 105.72 339250 220780 277580 310890 279540 346460 302100 301450 362700 391780 383010 377650 445160 377290 363800 450790 411350 451800 312820 203040 287360 306880 291360 346450 305240 313490 367150 390740 394630 384100 448490 393130 374490 451620 393400 428970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 679880000 26196 3621 24603 49128;49129;49130 39614;39615;39616 39616 3 9606 Homo sapiens -0.03410545707856727 TAEEVAALIR Unmodified 1071.5924 0.59242362 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q6JH03;Q6JH02 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 4.5 0.5 1 1 55.583 55.647 2 0.00017867 16125 20230619_1885_Aki_TMTPro18x_K_F5 138.98 72.902 180630 149070 167320 196170 169910 215700 203720 192240 212480 214800 235790 228490 233180 207030 217070 240680 250160 259920 166930 136860 171350 194420 177410 216000 203720 198680 216880 216320 240670 230670 237380 216040 222970 242330 239100 246640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77121000 26197 1863 24604 49131;49132 39617;39618 39618 2 9606 Homo sapiens 0.05949110643427957 TAEFQVAR Unmodified 920.47158 0.4715802 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 4.5 0.5 1 1 40.178 40.245 2 0.0017391 9607 20230619_1885_Aki_TMTPro18x_K_F5 142.36 88.808 391420 305350 341910 378180 416070 430790 415040 415900 515710 405910 446820 456910 471490 387950 445670 497980 529180 425430 361450 280210 352750 376620 426320 431350 421570 425650 516630 412530 462840 459370 479240 408160 458490 494500 504790 405220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 750820000 26198 4414 24605 49133;49134 39619;39620 39620 2 9606 Homo sapiens 0.00816327720622212 TAEGQALSEAR Unmodified 1131.552 0.55201537 4149 Q7L099-4;Q7L099-3;B4DG59;B4DKC2;Q7L099;Q7L099-2 RUFY3 Protein RUFY3 yes no 0 0 0 2 0 1 35.596 35.652 2 6.633E-12 7941 20230619_1881_Aki_TMTPro18x_K_F2 202.34 155.88 96430 85029 97960 146560 84554 85286 106440 101990 117120 87995 133410 142850 104390 110620 112000 117910 139420 140140 89221 78302 99465 142000 89400 91227 106410 102850 119130 91361 134920 141450 107990 115440 115300 119610 133140 132870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103820000 26199 4149 24606 49135 39621 39621 1 9606 Homo sapiens -0.008498557470147716 TAEHEAAQQDLQSK Unmodified 1554.7274 0.72741355 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 0 2.5 0.5 1 1 35.232 35.289 3 2.6506E-16 7778 20230619_1881_Aki_TMTPro18x_K_F2 197.06 169.38 41512 29674 52268 44394 52380 48865 46758 45461 56676 49172 62530 44945 46667 34740 65871 21861 35359 26176 38437 27298 52137 43686 54162 49006 47809 46780 57363 49379 63098 45469 48958 35525 64712 22576 34063 24850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78379000 26200 380 24607 49136;49137 39622;39623 39622 2 9606 Homo sapiens -0.02776105743419066 TAEHFQEAMEESK Oxidation (M) 1551.6511 0.65113707 83 G3V1E2;A0A5F9UJX7;A0A024R0A9;A0A5F9UP49;A0A024R084;Q9BRK5-4;Q9BRK5-3;Q9BRK5-6;Q9BRK5;H0Y3T6;Q9BRK5-2 SDF4 45 kDa calcium-binding protein yes no 0 1 0 2 0 1 36.952 37.012 3 0.00091174 8500 20230619_1881_Aki_TMTPro18x_K_F2 82.925 71.869 23261 18068 20992 22179 27276 28323 29449 25810 34606 29301 36122 27361 32543 25967 23566 30997 34549 25820 21485 16579 21617 22141 27888 28121 29710 26637 34993 29385 36757 27855 32896 27099 24765 30761 32889 24611 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19883000 26201 83 24608 49138 39624 39624 40 1 9606 Homo sapiens -0.10262245635044565 TAEHFQEAMEESK Unmodified 1535.6562 0.65622244 83 G3V1E2;A0A5F9UJX7;A0A024R0A9;A0A5F9UP49;A0A024R084;Q9BRK5-4;Q9BRK5-3;Q9BRK5-6;Q9BRK5;H0Y3T6;Q9BRK5-2 SDF4 45 kDa calcium-binding protein yes no 0 0 0 3.5 0.5 1 1 44.636 44.694 3 5.698E-11 11692 20230619_1882_Aki_TMTPro18x_K_F3 178.67 166.98 105210 82339 98958 100630 95084 115660 115840 114040 148990 148340 141060 105720 146740 114960 96973 138400 132590 108880 97206 75550 101020 100340 99776 115760 116610 117490 149620 146830 145020 109680 147180 119570 101670 136940 126350 103810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107960000 26202 83 24608 49139;49140 39625 39625 1 9606 Homo sapiens -0.09017941772435734 TAENATSGETLEENEAGD Unmodified 1836.7497 0.74972472 654 A0A024RB85;Q9UQ80;Q9UQ80-2 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 1 0 1 43.715 43.715 2 4.9157E-18 11718 20230619_1880_Aki_TMTPro18x_K_F1 173.11 168.31 79460 59822 67400 71412 85693 90839 79469 82721 104920 92293 102110 96828 107530 88286 78459 116420 116920 99683 73346 54885 69762 71425 87442 90212 81275 85297 105310 92941 105050 97876 108220 92823 82620 115490 111380 94920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 455820000 26203 654 24609 49141 39626 39626 1 9606 Homo sapiens -0.13518015646991444 TAESQTPTPSATSFFSGK Unmodified 1842.8636 0.86357268 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;A0A3B3ISX1;A0A3B3ITG9;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 8 0 1 54.804 54.871 3 8.448399999999999E-19 15653 20230619_1888_Aki_TMTPro18x_K_F8 181.41 171.35 252500 215340 254080 301960 246120 285320 314830 260450 281060 306690 322780 321490 357830 291090 314190 376370 372610 396410 233550 197810 258200 297460 258050 289130 312340 269310 290020 307900 330780 324800 361960 305880 323830 377760 356110 376220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 953220000 26204 1718;4020 24610 49142 39627 39627 1 9606 Homo sapiens -0.02414456023461753 TAETGYIQR Unmodified 1037.5142 0.5141733 1633 A0A6Q8PGB0;P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 0 4 0 1 36.138 36.184 2 7.583E-06 7989 20230619_1883_Aki_TMTPro18x_K_F4 178.65 138.55 58960 45245 55579 60942 65033 67726 68730 58392 84270 73489 90414 77991 86256 70644 71892 78655 100840 81549 54472 41560 56915 60323 66896 67763 69538 60739 85155 73644 92185 78768 87488 73554 74981 79062 96069 77496 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50214000 26205 1633 24611 49143 39628 39628 1 9606 Homo sapiens -0.0030832194181584782 TAEYDVAYGESHLFR Unmodified 1756.8057 0.80566387 883 Q8TBN2;A0A087X0S5;A0A384P5H7;P12109 COL6A1 Collagen alpha-1(VI) chain yes no 0 0 0 4 0 1 52.669 52.693 3 9.2819E-06 15214 20230619_1883_Aki_TMTPro18x_K_F4 113.59 106.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26206 883 24612 49144 39629 39629 1 9606 Homo sapiens -0.04246673158218073 TAFDDAIAELDTLNEDSYK Unmodified 2129.9641 0.96407459 3701 P61981;B3KNB4;B4DE78;B4DHC4 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes no 0 0 0 3.5 1.71 1 1 1 1 1 1 65.353 65.376 3 3.0286E-10 20505 20230619_1886_Aki_TMTPro18x_K_F6 127.22 117.02 11658 11181 14424 13871 12350 14283 14818 15450 16532 15215 18549 18294 19583 19235 19730 21365 24029 25596 10813 10253 14390 13798 13056 14437 14860 15697 16817 15487 18984 18479 19983 19917 20306 21666 22960 24261 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 516700000 26207 3701 24613 49145;49146;49147;49148;49149;49150 39630;39631 39631 2 9606 Homo sapiens -0.05570888551073949 TAFDEAIAELDTLNEDSYK Unmodified 2143.9797 0.97972465 3511 P27348;B4DMT8;Q53S41;B4DY04 YWHAQ 14-3-3 protein theta yes no 0 0 0 3.27 1.6 2 2 2 2 2 1 65.502 65.523 3;4 6.1721E-20 20558 20230619_1886_Aki_TMTPro18x_K_F6 187.78 177.99 36545 36169 38769 40051 40427 42599 41180 40885 40877 45523 50430 56326 57888 44087 52125 54041 51703 59592 33853 33129 39227 40177 41849 42864 41490 42021 42072 46068 51663 56263 58525 46431 53095 54452 49528 56513 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1079700000 26208 3511 24614 49151;49152;49153;49154;49155;49156;49157;49158;49159;49160;49161 39632;39633;39634 39634 3 9606 Homo sapiens -0.04650602034007534 TAFDEAIAELDTLNEESYK Unmodified 2157.9954 0.99537472 3535 V9HWD6;P31946-2;P31946 HEL-S-1;YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 0 0 3.67 1.49 1 1 2 2 2 1 65.553 65.578 3;4 1.9882E-19 20634 20230619_1883_Aki_TMTPro18x_K_F4 173.28 163.22 64685 53676 65609 68432 56493 66914 65126 64598 69034 75953 96046 92224 97270 89246 88683 95754 85442 107590 59825 49260 66452 67878 59661 67718 65337 66484 71179 76644 97299 92830 98842 92482 90200 96767 81935 101980 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 436320000 26209 3535 24615 49162;49163;49164;49165;49166;49167;49168;49169;49170 39635;39636;39637;39638;39639;39640 39638 6 9606 Homo sapiens -0.037303155169411184 TAFDEAIAELDTLSEESYK Unmodified 2130.9845 0.98447568 2805 D0PNI1;P63104;E7EX29;B0AZS6;P63104-2;B7Z2E6;H0YB80;Q2F831 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 0 3.67 1.89 1 2 2 1 1 1 1 66.49 66.513 3;4 2.3154E-15 21145 20230619_1882_Aki_TMTPro18x_K_F3 167.28 153.2 77437 62272 64671 67469 52581 59960 64231 65007 60372 77347 85323 80701 85805 72875 80456 95568 85590 85686 71499 57066 66586 67652 55914 61345 64026 66409 62770 77565 86366 81561 87292 76613 82276 95078 81843 81490 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 240510000 26210 2805 24616 49171;49172;49173;49174;49175;49176;49177;49178;49179 39641;39642;39643;39644;39645;39646;39647 39644 7 9606 Homo sapiens -0.035777178912667296 TAFEEVEEDLR Unmodified 1336.6147 0.61467521 4116 Q6P158;B4DKW2;H7C109;Q59G60 DHX57 Putative ATP-dependent RNA helicase DHX57 yes no 0 0 0 1 0 1 57.833 57.833 2 0.0058285 17609 20230619_1880_Aki_TMTPro18x_K_F1 85.355 69.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26211 4116 24617 49180 39648 39648 1 9606 Homo sapiens -0.04016754469466832 TAFQEALDAAGDK Unmodified 1335.6307 0.63065962 3097 H9ZYJ2;P10599;P10599-2 TXN Thioredoxin yes no 0 0 0 4.75 1.56 1 1 1 2 2 1 58.252 58.295 2;3 4.3289E-21 17154 20230619_1885_Aki_TMTPro18x_K_F5 233.69 181.44 1435600 1262900 1461300 1458600 1134800 1461700 1404700 1451100 1540500 1803900 1709100 1694300 1812900 1663400 1740500 1779100 1763300 1921400 1328300 1157600 1477500 1457600 1213400 1477500 1405900 1492500 1569800 1800500 1750300 1723600 1844200 1722900 1772700 1794000 1688000 1822900 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 7741199999.999999 26212 3097 24618 49181;49182;49183;49184;49185;49186;49187;49188 39649;39650;39651;39652;39653 39651 5 9606 Homo sapiens -0.023730482325845514 TAFVNSCYIK Unmodified 1201.5801 0.58014438 1906 A1MA90;Q9H9J2 MRPL44 39S ribosomal protein L44, mitochondrial yes no 0 0 0 3 0 1 52.146 52.211 2 0.028389 15126 20230619_1882_Aki_TMTPro18x_K_F3 80.239 51.152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26213 1906 24619 49189 39654 39654 1 9606 Homo sapiens -0.0125824909127914 TAGAPDPAWDWQHVGPGYR Unmodified 2079.9551 0.95512208 3063 H3BM67;H3BUP2;H3BUN4;Q5TZN6;O60936;O60936-3 NOL3 Nucleolar protein 3 yes no 0 0 0 6 0 1 53.254 53.331 3 3.7917E-07 15337 20230619_1886_Aki_TMTPro18x_K_F6 101.67 94.308 33207 57376 38396 47710 32142 47920 54567 40176 61904 59264 58498 57676 54618 52358 52161 51762 54528 57426 30958 52364 38568 49014 34563 48294 53893 42143 62489 58851 60006 58406 55789 54139 53214 52355 52169 54473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77197000 26214 3063 24620 49190 39655 39655 1 9606 Homo sapiens -0.04165727815598075 TAGINVR Unmodified 729.41334 0.41333704 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 7 0.816 1 1 1 34.646 34.684 2 0.02054 7167 20230619_1887_Aki_TMTPro18x_K_F7 104.45 62.946 1091800 559870 1340100 1393300 1724000 1849400 1324500 1532800 1557100 1107600 1740900 1893800 1678300 1489000 1654600 748900 1920200 1725100 1009100 520060 1346500 1342600 1748900 1826500 1367000 1576200 1578600 1166800 1775900 1871400 1714000 1510800 1692300 822390 1833300 1628900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1003999999.9999999 26215 3622 24621 49191;49192;49193 39656;39657 39656 2 9606 Homo sapiens 0.03780690865994529 TAGLRPMETK Unmodified 1102.5805 0.58047873 1670 P30419;A0A7I2V539;Q96HI4;P30419-2;A0A7I2V3X4 NMT1 Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase yes no 0 0 1 3.67 3.09 1 1 1 39.012 39.03 3 0.013849 9662 20230619_1880_Aki_TMTPro18x_K_F1 68.44 32.045 527510 396650 489630 501600 539210 597040 591220 593820 790180 628130 744620 747400 750720 640080 684990 716900 827140 753670 487240 364130 501390 499250 557980 596360 599160 607730 791220 636940 766320 749800 763030 667820 705670 721220 789520 715720 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 512180000 26216 1670 24622 49194;49195;49196 39658;39659 39658 2 9606 Homo sapiens 0.033291706285808687 TAGLRPMETK Oxidation (M) 1118.5754 0.57539335 1670 P30419;A0A7I2V539;Q96HI4;P30419-2;A0A7I2V3X4 NMT1 Glycylpeptide N-tetradecanoyltransferase 1;Glycylpeptide N-tetradecanoyltransferase yes no 0 1 1 7 0 1 34.799 34.875 3 0.083515 7264 20230619_1887_Aki_TMTPro18x_K_F7 46.706 30.815 44990 31668 35511 37072 50524 42220 45707 45998 52225 34822 52950 50621 45626 41763 44121 47128 52998 44911 41492 29057 37080 37078 51085 42427 46561 46435 52779 36294 53955 50415 46755 43620 45395 47148 50566 42709 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21637000 26217 1670 24622 49197 39660 39660 1087 1 9606 Homo sapiens 0.020848667659493003 TAGLSDLY Unmodified 838.40725 0.40724861 4407 Q99816;Q99816-2;D3DQY6;J3QRU6;J3QKS4 TSG101 Tumor susceptibility gene 101 protein yes no 0 0 0 3.5 0.5 1 1 57.606 57.624 2 0.0077285 17337 20230619_1883_Aki_TMTPro18x_K_F4 106.76 91.54 76931 64071 73783 79007 83327 78232 86076 86911 85896 81403 95936 78038 83376 72229 100680 87855 92003 90195 71120 58779 75373 78569 85748 79406 86647 88042 87886 82451 97334 79274 86307 75531 101520 88210 88099 85649 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 74386000 26218 4407 24623 49198;49199 39661;39662 39662 2 9606 Homo sapiens -0.01841872156194313 TAGNSEFLGK Unmodified 1022.5033 0.50327426 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;H0YCH5;H0YEC5;H0YD77;H0YCF8;H0YDC0;H0YEN8;H0YD99 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 6.5 0.5 1 1 46.224 46.307 2;3 1.7835E-11 11876 20230619_1887_Aki_TMTPro18x_K_F7 178.84 145.48 129340 103220 111270 119810 143220 157940 132910 140550 177900 115400 116110 105560 128640 101000 121680 130540 131900 102660 119440 94652 115070 120140 146080 156420 135960 144060 176070 117830 122520 107560 130550 105900 124460 129130 125900 97911 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100120000 26219 3752 24624 49200;49201 39663;39664 39664 2 9606 Homo sapiens -0.0070772431608929764 TAGPEQGPGLGGR Unmodified 1195.5945 0.59454889 4030 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 yes yes 0 0 0 4 0 1 35.721 35.768 2 6.0546E-09 7845 20230619_1883_Aki_TMTPro18x_K_F4 169.58 107.11 25122 18150 20042 23592 23215 24260 22683 22794 29843 28100 28726 25870 30057 26784 23562 32643 34401 27401 23173 16670 20847 23381 23864 24452 23123 23531 29955 28059 29554 26414 30347 27897 24719 32392 32761 26107 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17007000 26220 4030 24625 49202 39665 39665 1 9606 Homo sapiens 0.004575393812501716 TAGPIASAQK Unmodified 942.51345 0.51344502 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;A0A024R2V0;P27816-4;Q86Y04;B5MEG9 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 0 8 0 1 39.654 39.643 2 6.5925E-05 9345 20230619_1888_Aki_TMTPro18x_K_F8 144.77 84.181 19267 9034.2 24723 19925 32099 40916 25351 26014 35007 10725 10155 8793.5 9894.5 7365.8 17078 6666.6 8301.2 9115.2 17810 8377.4 24748 19476 32625 39394 26238 27179 34059 11661 11583 8975.5 10444 7620.1 16697 6881.8 8033 8628.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6304600 26221 2902 24626 49203 39666 39666 1 9606 Homo sapiens 0.03988883409135724 TAGPLESSETEEASQLK Unmodified 1775.8425 0.84250289 1989 Q9P2E9;A7BI36;Q9P2E9-3;A1A5C5;A1A5C4;F8W7S5;B3KSG1;A0A087WU26 RRBP1 Ribosome-binding protein 1 yes no 0 0 0 2.5 0.5 1 1 49.92 49.979 3 0.00012571 14142 20230619_1882_Aki_TMTPro18x_K_F3 85.619 67.919 63784 51841 56838 57809 59376 70130 71228 67918 72110 68912 66035 59494 72529 68648 75572 77162 64547 67097 58924 47518 58373 58076 61829 69929 71147 69555 73182 69329 68308 61183 73996 70925 76195 76849 61882 63827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113030000 26222 1989 24627 49204;49205 39667;39668 39668 2 9606 Homo sapiens -0.014384661229314588 TAGQTGMCGGVR Unmodified 1193.5281 0.52812558 4075 Q5VTL8;Q5VTL8-2 PRPF38B Pre-mRNA-splicing factor 38B yes no 0 0 0 7 0.816 1 1 1 32.799 32.84 2 3.9208E-09 6446 20230619_1887_Aki_TMTPro18x_K_F7 171.92 152.14 36613 22852 38689 35616 35448 47426 32315 39968 53511 33950 32381 31238 38957 29576 31183 25894 49276 34662 33821 21046 39063 35061 37099 46846 33442 41155 52427 34601 34483 31767 39188 30406 32804 26592 46871 32883 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26937000 26223 4075 24628 49206;49207;49208 39669;39670 39670 2 9606 Homo sapiens -0.06089735776663474 TAGTICLETFK Unmodified 1239.6169 0.61692381 3455;2572 P15170-2;P15170-3;H3BR35;Q7KZX8;A8K2W7;P15170;B2RCT6;B4DQM6;Q8IYD1 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B no no 0 0 0 5.33 3.09 1 1 1 56.162 56.2 2;3 9.7148E-17 16214 20230619_1888_Aki_TMTPro18x_K_F8 270.06 212.95 195950 153380 169460 187380 185810 211620 190900 201170 211990 189810 197210 165940 200450 163310 220880 230700 200910 170750 180940 140730 174700 186750 191980 211890 192890 205890 214160 191760 203040 169710 205390 172070 223190 227390 192210 162930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 450570000 26224 3455;2572 24629 49209;49210;49211 39671;39672 39672 2 9606 Homo sapiens 0.006700027346141724 TAGTLFGEGFR Unmodified 1154.572 0.57202253 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q96T67;Q5T9A4;Q5T9A4-3;A0A5K1VW56;Q9H834;Q5T9A4-2 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B yes no 0 0 0 5.33 3.09 1 1 1 54.048 54.094 2 1.9705E-05 15304 20230619_1888_Aki_TMTPro18x_K_F8 179.53 164.45 329790 280660 276390 357440 310130 356250 402370 383510 434870 418530 392650 369880 465360 387420 412470 502340 446990 438970 304620 257540 286300 354560 322140 360900 401160 390880 439590 419700 407910 378590 470120 405140 422750 499160 427290 417630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 346240000 26225 4603 24630 49212;49213;49214 39673;39674 39674 2 9606 Homo sapiens 0.0009193998362206912 TAGYYPNPPLVLSSDETLISK Unmodified 2264.1576 0.15762944 2018 A8K2Z3;Q5TFE4;Q5TFE4-2 NT5DC1 5'-nucleotidase domain-containing protein 1 yes no 0 0 0 8 0 1 62.681 62.706 3 1.3335E-11 18967 20230619_1888_Aki_TMTPro18x_K_F8 130.87 111.31 29001 27228 31477 27855 27463 29003 27028 27478 28116 41106 38397 33986 42763 34840 37035 39455 34911 43131 26860 24926 31680 28120 28814 29230 27343 28535 29060 40578 39071 34857 43209 36179 37660 39773 33480 40897 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83589000 26226 2018 24631 49215 39675 39675 1 9606 Homo sapiens 0.07611692955788385 TAHLDEEVNKGDILVVATGQPEMVK Unmodified 2692.3742 0.37418093 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;A0A8V8TKR5;A0A8V8TKS0;A0A8V8TL46;A0A8V8TMA9 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 1 6 0 1 57.575 57.644 4 1.6015E-19 17161 20230619_1886_Aki_TMTPro18x_K_F6 157.83 149.83 39716 6954.8 30527 42653 30549 25210 38128 33109 39750 54703 45174 46008 53765 46417 39959 57605 47602 59734 36474 6723.4 31838 39826 31883 26954 38046 33891 40708 53837 46464 47101 53950 48473 41400 57770 45555 56668 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 370540000 26227 2973 24632 49216 39676 39676 1 9606 Homo sapiens 0.09568880727147189 TAICNLILGNPPSK Unmodified 1496.8021 0.80209882 2253 Q9NRX1;B2R823 PNO1 RNA-binding protein PNO1 yes no 0 0 0 4.5 0.5 1 1 61.062 61.089 3 2.0418E-07 18385 20230619_1885_Aki_TMTPro18x_K_F5 141.75 106.5 76619 65088 75540 67101 64296 83960 80911 75045 97066 81350 73260 69196 94422 74536 78563 105110 86937 91406 70856 59610 76625 67875 68244 83414 81105 77446 97011 81571 77182 71058 94925 78350 80778 104290 83130 86947 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164390000 26228 2253 24633 49217;49218 39677 39677 1 9606 Homo sapiens 0.07356985534238447 TAIEEVQAER Unmodified 1144.5724 0.57241646 2554 B4DNM8;Q32P28-4;Q32P28;Q32P28-3;Q68CW0 LEPRE1;DKFZp547C166 Prolyl 3-hydroxylase 1 yes no 0 0 0 1 0 1 40.589 40.589 2 1.2505E-10 10342 20230619_1880_Aki_TMTPro18x_K_F1 158.85 129.38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26229 2554 24634 49219 39678 39678 1 9606 Homo sapiens 0.005913149127991346 TAIELGPLWSSSLFNTGFLK Unmodified 2180.1518 0.1517562 2240 B4DXX1;B2R713;Q7Z2T5;X6RK96 TRMT1L TRMT1-like protein yes no 0 0 0 5 0 1 66.709 66.751 3 0.062335 20883 20230619_1885_Aki_TMTPro18x_K_F5 39.237 28.45 2871.6 2246.9 1979.4 2445 2839.1 3405.6 3303.2 2678.2 2845.9 3316.9 3102.4 3794.6 3170.8 3609.8 3391.5 2742.1 2880.5 3967.9 2647.7 2059.4 2101.7 2465 2896 3354.2 3286.9 2804.7 2938.4 3332.7 3180.4 3818.7 3249.6 3681.4 3413.3 2841 2768.5 3751.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6230600 26230 2240 24635 49220 39679 39679 1 9606 Homo sapiens 0.10888639234781294 TAIHEVMEQGR Oxidation (M) 1285.6085 0.60848439 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 1 0 2.5 0.5 1 1 32.042 32.112 3 0.00011424 6431 20230619_1882_Aki_TMTPro18x_K_F3 115.65 96.02 56165 37912 52899 56812 73255 73705 60449 68077 75489 56846 72457 70984 64504 61705 70067 52227 74627 69754 51852 34886 54325 56015 74113 73108 62175 69609 75865 58516 74138 71097 66398 63442 71298 53686 71325 66085 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81738000 26231 1104 24636 49221;49222 39680;39681 39681 680 2 9606 Homo sapiens -0.022895511820024694 TAIHEVMEQQTISIAK Oxidation (M) 1813.9244 0.9243988 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 1 0 6 0 1 46.812 46.895 3 7.4882E-07 12536 20230619_1886_Aki_TMTPro18x_K_F6 119.65 107.02 40446 37065 40378 50332 44804 40638 43412 40757 48846 49273 59401 50632 49146 45385 46829 52041 52377 53394 37427 34027 41135 49592 46084 41857 44032 41893 49862 49383 59935 51194 50394 47327 47997 52254 50067 50696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147940000 26232 1091 24637 49223 39682 39682 665 1 9606 Homo sapiens 0.04999357755150413 TAIHEVMEQQTISIAK Unmodified 1797.9295 0.92948418 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 7.5 0.5 1 1 51.988 52.064 3 1.7619E-08 14393 20230619_1888_Aki_TMTPro18x_K_F8 137.89 81.294 616150 475830 735570 630560 420330 601970 564030 584750 728080 811450 697030 757230 844440 625970 632690 823520 813650 817640 570450 436990 731960 623950 466450 610150 566100 604650 731910 806130 723210 766320 846640 661000 658110 823460 776770 776650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2172000000 26233 1091 24637 49224;49225 39683;39684 39684 2 9606 Homo sapiens 0.062436616177819815 TAITVEHLAIK Unmodified 1194.6972 0.69722304 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 4.5 3.5 1 1 49.575 49.611 3 5.7776E-09 14171 20230619_1880_Aki_TMTPro18x_K_F1 172.17 122.82 1065100 852560 1030600 1134100 968030 1082000 1133000 1138200 1277800 1408500 1283200 1271000 1562100 1197500 1201200 1666800 1315700 1422400 984490 782880 1049500 1121400 1015100 1099300 1137600 1166200 1295000 1404600 1328200 1294600 1567400 1262900 1236800 1652400 1258400 1353200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2370900000 26234 1748 24638 49226;49227 39685;39686 39685 2 9606 Homo sapiens 0.10766232119976848 TALAATNPAVR Unmodified 1083.6037 0.60365701 3873 Q14008-2;Q14008;Q14008-3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 1 0 1 39.503 39.503 2 5.3526E-05 9854 20230619_1880_Aki_TMTPro18x_K_F1 141.95 111.7 67950 47700 56239 67124 63333 66546 61155 61396 79373 73131 89861 102610 101130 86808 65570 117490 130880 119820 62686 43852 58264 66151 65202 67216 62367 63427 80228 74195 92226 102330 101250 91662 71186 117530 124510 113820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66039000 26235 3873 24639 49228 39687 39687 1 9606 Homo sapiens 0.06519932737569434 TALALAIAQELGSK Unmodified 1384.7926 0.79257999 1442 B5BUB1;A0A384MTR5;Q9Y265;Q9Y265-2;E7ETR0;B3KRS7 RUVBL1 RuvB-like 1 yes no 0 0 0 3 0 1 64.508 64.54 2 0.00073134 20378 20230619_1882_Aki_TMTPro18x_K_F3 112.43 93.332 6719.4 8894.5 8532.1 8013.3 6955.9 6727.2 11027 12236 12330 11419 12346 9045.9 10862 9919.6 10351 10630 10401 13448 6251.1 8126.7 8491.6 8164.7 7445 7035.3 10925 12090 12479 11509 12579 9333.5 11112 10247 10540 10827 9972.6 12731 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23899000 26236 1442 24640 49229 39688 39688 1 9606 Homo sapiens 0.11557540520357179 TALDAFGR Unmodified 849.43447 0.43446642 1097 P51659;A0A0S2Z4J1;B2R659;E7EPL9;A0A804HK65;A0A2R8YD50;P51659-2;P51659-3;B4DSD0;B4DDM5;A0A804HKU2;E7ER27;A0A2R8YF45;A0A2R8YDT8;A0A804HKB5;A0A804HK88 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 0 0 0 6.5 0.5 1 1 47.143 47.228 2 0.014291 12292 20230619_1887_Aki_TMTPro18x_K_F7 94.114 74.627 387270 310380 359930 324500 272170 385050 335230 316410 450540 409710 426800 449050 460020 369370 409140 544820 548160 489180 357840 284350 366430 327560 292300 383140 338020 330550 451390 410440 440560 451540 466080 392900 425330 541120 522720 465430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 277050000 26237 1097 24641 49230;49231 39689;39690 39690 2 9606 Homo sapiens 0.003726561748635504 TALFEEISR Unmodified 1064.5502 0.55022446 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;Q6MZR8;A8K7A6;Q68EN4;Q5H934 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 4.5 0.5 1 1 54.716 54.783 2 0.00016685 16130 20230619_1883_Aki_TMTPro18x_K_F4 122.33 69.543 180090 144490 154970 172480 136730 173990 163070 161900 193280 213390 200750 205700 223210 191040 191220 234390 219820 243140 166310 132530 159360 171910 144460 175530 163870 167630 195640 212660 206620 208660 225600 199870 196840 235200 210210 230750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 263220000 26238 1432 24642 49232;49233 39691;39692 39691 2 9606 Homo sapiens 0.02053135235018999 TALIHDGLAR Unmodified 1065.5931 0.59309232 3501 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 0 6.67 0.943 1 3 3 2 40.503 40.564 2;3 2.0049E-14 9868 20230619_1887_Aki_TMTPro18x_K_F7 198.61 106.15 566140 479930 515820 578860 562090 628330 603060 586500 667860 674290 647940 651930 711880 590140 586310 785390 705680 711660 523230 440170 529270 577080 581490 630710 607680 604470 676240 676110 668470 660940 718580 621100 606110 781380 674080 676690 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 8103299999.999999 26239 3501 24643 49234;49235;49236;49237;49238;49239;49240;49241;49242 39693;39694;39695;39696 39695 4 9606 Homo sapiens 0.06291950083118536 TALINSTGEEVAMR Oxidation (M) 1506.7348 0.73480712 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-6;P02545-2;Q3BDU5;P02545-4;P02545-5;Q5TCI8;B4DFR3 LMNA Prelamin-A/C;Lamin-A/C yes no 0 1 0 3.8 0.748 2 2 1 45.607 45.67 2;3 1.8338E-08 11981 20230619_1883_Aki_TMTPro18x_K_F4 145.49 125.39 93074 73444 85216 101250 116840 130750 121400 122420 143680 109240 113050 112030 112170 99782 104100 120670 105190 107930 85983 67472 87813 100300 119030 129740 122770 125260 143800 111260 117380 113230 114160 104390 106160 120180 100650 102640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1135800000 26240 1428 24644 49243;49244;49245;49246;49247 39697;39698 39698 910 2 9606 Homo sapiens 0.001709105326426652 TALINSTGEEVAMR Unmodified 1490.7399 0.73989249 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-6;P02545-2;Q3BDU5;P02545-4;P02545-5;Q5TCI8;B4DFR3 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 4.33 0.471 2 1 49.322 49.373 2;3 2.613E-16 13687 20230619_1883_Aki_TMTPro18x_K_F4 197.36 177.25 265310 128720 199370 194520 242820 269570 290570 292010 324510 239440 210130 300190 231480 213850 215740 280460 275430 292530 244200 118670 208690 192020 250250 267270 291080 295260 323940 246690 222570 298810 235090 226840 223320 281240 263070 277660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2174200000 26241 1428 24644 49248;49249;49250 39699;39700 39699 2 9606 Homo sapiens 0.014152143952514962 TALLDAAGVASLLTTAEVVVTEIPKEEK Unmodified 2867.5743 0.57432053 272 P10809;A0A024R3X4;B3GQS7;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 1 7 0 1 67.955 67.977 4 1.942E-05 21297 20230619_1887_Aki_TMTPro18x_K_F7 86.791 76.18 2893.6 3603.6 3451.7 3397.4 4046 2593.7 2172.9 3244.6 3221.8 2841.5 4815.3 2024.2 1866.9 1961.5 2963.4 2060.9 2484.2 1567.6 2688.6 3294.1 3464.2 3441.7 4091.5 2706.9 2339.2 3256.9 3281.1 2868 4717.1 2100.1 2051.6 2029 2962.7 2045.5 2375.1 1497.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2520600 26242 272 24645 49251 39701 39701 1 9606 Homo sapiens 0.2152363387585865 TALLGGGQR Unmodified 871.48756 0.48756462 1282 P05166-2;B7Z8A8;A0A1B2JLU8;C9JQS9;Q59GV0;E9PDR0;E7ETT1;E7EUY3;E7ETT4;E7EX59;P05166;C9JVY9;F8WBI9;E7ENC1;Q86TD7 PCCB;DKFZp451E113 Propionyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 2 0 1 39.543 39.613 2 0.04412 9629 20230619_1881_Aki_TMTPro18x_K_F2 68.214 40.728 97909 67414 84959 85776 91862 101220 94781 108170 136420 103910 109750 102430 101960 90020 100430 115940 132310 114800 90345 61914 87486 85339 95060 101330 96697 109840 135450 105260 113460 103690 104320 94628 103990 115990 126170 109110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50297000 26243 1282 24646 49252 39702 39702 1 9606 Homo sapiens 0.04668033957523221 TALNHCNLCR Unmodified 1257.5707 0.5706591 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YFD1;Q6PEK6;H7C141 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 4.5 3.5 1 1 32.169 32.172 3 4.7049E-14 6381 20230619_1888_Aki_TMTPro18x_K_F8 223.87 195.17 62424 51740 54788 72518 88109 93017 91148 96027 107440 56299 53832 51792 50853 44241 63870 56913 69530 58378 57668 47533 56915 71756 88960 92541 92149 96793 106240 58968 57648 52574 52664 46560 64986 57093 66393 55473 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91234000 26244 2865 24647 49253;49254 39703;39704 39704 2 9606 Homo sapiens -0.04782340648421268 TALNLFFK Unmodified 952.5382 0.53820321 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 5 0 1 62.941 62.988 2 0.014615 19277 20230619_1885_Aki_TMTPro18x_K_F5 92.439 71.884 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26245 3647 24648 49255 39705 39705 1 9606 Homo sapiens 0.060035632825247376 TALPAGLSATEK Unmodified 1157.6292 0.62920306 2996 Q567U6;F8W9X7 CCDC93 Coiled-coil domain-containing protein 93 yes no 0 0 0 7 0 1 49.544 49.628 3 0.061067 13437 20230619_1887_Aki_TMTPro18x_K_F7 33.593 16.962 77754 58408 71429 67646 66914 77977 74557 72036 101370 75584 73410 73562 84526 66043 74920 87444 79508 82391 71812 53573 72997 67720 70162 77932 75548 74101 100580 76203 77116 74542 85435 69529 76676 87209 76049 78299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28014000 26246 2996 24649 49256 39706 39706 1 9606 Homo sapiens 0.056693624693252787 TALPAQSAATLPAR Unmodified 1366.7569 0.75686319 2337 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1.67 0.471 1 2 44.261 44.316 2;3 9.8176E-16 12015 20230619_1880_Aki_TMTPro18x_K_F1 229.6 212.65 351060 308960 353930 345820 387590 479230 439640 431440 498030 310680 316920 309130 339080 271150 333520 349460 350120 339220 324790 283120 359880 348070 401740 473250 441890 440740 496260 320780 334680 312850 345100 285170 340240 349300 334760 322340 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 411860000 26247 2337 24650 49257;49258;49259 39707;39708;39709 39707 3 9606 Homo sapiens 0.08815503063374308 TALPTSGSSAGELELLAGEVPAR Unmodified 2225.1539 0.15394104 304 B4DU91;A0A024R4S1;Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 EPN1 Epsin-1 yes no 0 0 0 5 0 1 62.026 62.074 3 3.816E-13 18846 20230619_1885_Aki_TMTPro18x_K_F5 125.04 115.76 50973 44979 50297 54218 49949 66627 58825 56439 66430 48457 41004 34752 39276 35239 55420 43782 38884 42747 47151 41246 51187 54152 52244 66166 59013 58148 66190 49032 43191 35944 40916 36793 55097 43840 37391 40598 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97819000 26248 304 24651 49260 39710 39710 1 9606 Homo sapiens 0.09037023181963377 TALQEEIK Unmodified 930.50221 0.50221163 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;A0A0J9YXZ5;F2Z2E2;A2RRC9;Q86VI3 IQGAP1;hCG_1991735;IQGAP3 Ras GTPase-activating-like protein IQGAP1;Ras GTPase-activating-like protein IQGAP3 yes no 0 0 0 3.5 0.5 1 1 46.033 46.094 2 0.0017839 12366 20230619_1882_Aki_TMTPro18x_K_F3 137.13 41.525 152570 112790 134210 133550 163700 179700 162640 160080 242630 186810 216550 222930 217740 180450 196990 222230 254780 244500 140850 103480 138310 133790 167870 177780 166460 165590 241410 188610 223460 223260 221250 189780 203990 223810 243150 232030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188920000 26249 707 24652 49261;49262 39711 39711 1 9606 Homo sapiens 0.03418061315005616 TALTTTISSR Unmodified 1049.5717 0.57168818 4447 Q9BV20;Q9BV20-2 MRI1 Methylthioribose-1-phosphate isomerase yes no 0 0 0 1.5 0.5 1 1 41.372 41.41 2 2.7035E-05 10456 20230619_1881_Aki_TMTPro18x_K_F2 156.83 127.52 194320 146290 170390 184100 196860 213940 196200 180350 241460 208540 236840 244430 240210 216310 211040 245800 272020 260690 179410 134290 175550 183170 202470 213320 199220 187400 243150 210460 243380 245570 243810 225560 218660 247280 259600 247490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132420000 26250 4447 24653 49263;49264 39712;39713 39713 2 9606 Homo sapiens 0.04888520263762075 TALVERDDFSSGTSSR Unmodified 1726.8122 0.81220581 1181 Q53T76;A8K1Z2;A0A140VJK2;P43304;Q8WUQ0;F5GYK7 GPD2 Glycerol-3-phosphate dehydrogenase;Glycerol-3-phosphate dehydrogenase, mitochondrial yes no 0 0 1 3.5 0.5 1 1 40.529 40.579 3 1.6086E-05 9803 20230619_1883_Aki_TMTPro18x_K_F4 105.76 89.872 30035 26068 34758 38857 48358 41123 40948 42274 50019 37413 43623 42224 46751 42748 45924 47805 50505 39970 27819 23962 35130 38205 48855 41456 41994 42980 50160 38247 45193 42698 47604 44314 46972 47525 48205 38086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90962000 26251 1181 24654 49265;49266 39714 39714 1 9606 Homo sapiens -0.022127799974896334 TAMDQALQWLEDK Unmodified 1547.729 0.72899346 852 Q6ICJ4;A0A087WY67;Q6IB75;G9J6Q6;G9J6Q5;G9J6Q4;B2R533;P0CG30;P0CG29 Em:AP000351.3;GSTT2;GSTT2B Glutathione S-transferase theta-2B;Glutathione S-transferase theta-2 yes no 0 0 0 6.5 0.5 1 1 64.949 64.984 3 1.7527E-06 20335 20230619_1886_Aki_TMTPro18x_K_F6 139.05 126.17 59761 53375 62469 59016 54667 82225 71191 73181 75193 72402 78353 88131 84924 83979 93017 87980 97667 101800 55312 48904 63130 59465 58001 81126 70968 75344 76490 73707 80636 88603 86937 86934 94671 89143 93431 96526 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 256050000 26252 852 24655 49267;49268 39715 39715 1 9606 Homo sapiens -0.02296187979050046 TAMNVNEIFMAIAK Unmodified 1551.7789 0.77892054 164 A0A024R1U4;P51148;P51148-2 RAB5C Ras-related protein Rab-5C yes no 0 0 0 3 0 1 64.635 64.667 2 5.6062E-20 20392 20230619_1882_Aki_TMTPro18x_K_F3 210.41 163.8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26253 164 24656 49269 39716 39716 1 9606 Homo sapiens 0.025102234252699418 TAMVAALSPADINYDETLSTLR Unmodified 2351.1679 0.16787655 1516;3275 Q12756-3;A0A3B3ITW6;A0A3B3ITF7;Q12756;Q12756-2;A0A3B3ITE5;A0A3B3IUA1;A0A3B3IT28;A0A3F2YNW9;A0A3B3IU40;X5D7J0;A0A087WWA3;A0A8Q3WLB3;Q4R9M9;Q4R9M8;A0A8Q3WM94;A0A8Q3WLB2;A0A3B3ITK3;A0A024R4H4;O60333-2;O60333;O60333-4;Q4R9M7;H7C0K6;O60333-3 KIF1A;KIF1B;KIF1Bbeta Kinesin-like protein KIF1A;Kinesin-like protein;Kinesin-like protein KIF1B no no 0 0 0 7 0 1 63.238 63.271 3 8.4082E-31 19340 20230619_1887_Aki_TMTPro18x_K_F7 207.07 181.48 33279 29792 37045 33681 33000 41299 37908 37618 42455 42835 41224 41385 44718 37929 43424 45699 46425 53112 30819 27302 37243 33812 34759 41094 38091 38817 42961 42971 42516 41964 45470 39669 44359 46204 44437 50343 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91796000 26254 1516;3275 24657 49270 39717 39717 1 9606 Homo sapiens 0.04633932618799008 TANLNLETR Unmodified 1030.5407 0.5407224 3987 Q53F02;Q9UKF6;G5E9W3;B4DQR2 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes no 0 0 0 5 0 1 40.877 40.965 2 0.0014396 9931 20230619_1885_Aki_TMTPro18x_K_F5 115.78 83.461 195490 144830 187810 197740 207570 239720 232140 215030 278680 230340 291100 297670 255500 222730 234470 259560 286210 247110 180600 133080 191820 195850 214850 238580 234030 221860 281470 234100 296530 296580 260970 234050 241770 259510 273080 234980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 224320000 26255 3987 24658 49271 39718 39718 1 9606 Homo sapiens 0.026673669495039576 TANQLMNDFAEK Unmodified 1380.6344 0.63436479 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7;Q32P42;A8K3I2;E7EN38;A0A494C122;E7ESD9;A0A494BZX5;A0A494C0Y7 RAD50 DNA repair protein RAD50 yes no 0 0 0 5.5 0.5 1 1 57.298 57.363 3 3.8264E-05 16828 20230619_1885_Aki_TMTPro18x_K_F5 98.337 84.328 131160 120540 130830 130060 116330 148820 145730 135620 179360 116100 116210 109480 116770 101890 130050 128540 126520 144550 121370 110410 132740 130870 122970 148750 146220 138970 178090 118320 122230 111260 119840 106800 131820 129640 121210 137050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 173900000 26256 4309 24659 49272;49273 39719;39720 39720 2 9606 Homo sapiens -0.04072701730387962 TANSPGSGARPDPVR Unmodified 1480.7383 0.73825301 1766 B4DKX3;A0A8I5KSH6;Q13206;A0A8I5KQZ1;A0A3B3ISR7;Q86VR6;E9PIF2;Q59EC7;A0A8I5KXY1;A0A8I5KPM1;A0A8I5KUU7 DDX10 Probable ATP-dependent RNA helicase DDX10 yes no 0 0 1 5.5 0.5 1 1 29.293 29.346 3 0.0011074 5520 20230619_1886_Aki_TMTPro18x_K_F6 78.285 57.034 19624 14016 18266 16578 20892 23212 20203 20259 23180 20374 25491 25112 28290 20962 21011 28717 29567 22635 18121 12861 18697 16624 21482 22901 20507 20900 23529 20735 26156 25158 28424 22168 22005 28373 28159 21589 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 146860000 26257 1766 24660 49274;49275 39721;39722 39722 2 9606 Homo sapiens 0.017113414215145895 TAPAANLASR Unmodified 970.51959 0.51959303 1230 Q9UQ35;A0A140VK53;O60382;I3L3Q8;A0AUK8 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 7 0.816 1 1 1 35.171 35.209 2 0.00021791 7377 20230619_1887_Aki_TMTPro18x_K_F7 136.96 121.52 127670 77758 129480 148720 181610 195690 159620 164860 206880 107950 138720 127780 127600 105450 134840 85923 157160 109680 117880 71827 132280 144800 183960 193480 163610 169020 205020 112960 144990 128080 130960 108510 137920 88175 149830 104100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 196660000 26258 1230 24661 49276;49277;49278 39723;39724 39723 2 9606 Homo sapiens 0.03315401640657001 TAPFDSR Unmodified 792.37662 0.37661719 3453 P14854;A0A494C160;K7EQD3 COX6B1 Cytochrome c oxidase subunit 6B1 yes no 0 0 0 4 0.816 1 1 1 36.637 36.701 2 0.007192 8224 20230619_1883_Aki_TMTPro18x_K_F4 127.12 72.592 212290 155010 237780 253530 381330 366230 343830 344820 414520 229840 296580 271140 293970 278090 260860 216080 322550 268310 196360 142740 241680 249250 383280 361220 350820 350570 412960 240110 309530 273740 298830 283290 268950 221290 307640 254490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 323280000 26259 3453 24662 49279;49280;49281 39725;39726 39726 2 9606 Homo sapiens -0.02787605750563671 TAPGMGDQSGCYR Oxidation (M) 1414.5605 0.56054792 2142;4410 A8K9U0;Q9BWF3;E9PB51;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B no no 0 1 0 3.67 0.471 1 2 32.082 32.149 2;3 3.0105E-08 6361 20230619_1883_Aki_TMTPro18x_K_F4 160.22 155.33 34675 22815 26180 30671 37156 39575 34668 36877 42850 37555 46630 51535 55801 44068 32715 59644 60543 62384 31959 20970 27492 30434 37683 39276 35352 37871 43329 38354 48064 51460 55568 46536 35357 59750 57671 59217 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91756000 26260 2142;4410 24663 49282;49283;49284 39727;39728 39728 1340 2 9606 Homo sapiens -0.13014993164347288 TAPGMGDQSGCYR Unmodified 1398.5656 0.5656333 2142;4410 A8K9U0;Q9BWF3;E9PB51;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B no no 0 0 0 4.5 0.5 1 1 37.21 37.278 2 9.7951E-16 8453 20230619_1883_Aki_TMTPro18x_K_F4 215.04 199.89 34995 30287 31905 32972 31658 46067 36119 36983 51941 45360 48940 57738 68416 54638 33029 81582 78611 74230 32347 27749 32685 33253 33149 45360 36648 38626 51895 45804 51211 57994 67559 57882 36990 80978 74744 70598 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57240000 26261 2142;4410 24663 49285;49286 39729;39730 39729 2 9606 Homo sapiens -0.11770689301738457 TAPPASPEAR Unmodified 995.50361 0.50360861 4372 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 0 0 0 3 0 1 31.126 31.212 2 0.016572 6065 20230619_1882_Aki_TMTPro18x_K_F3 78.516 28.703 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26262 4372 24664 49287 39731 39731 1 9606 Homo sapiens 0.005676954037539872 TAPQCLLR Unmodified 957.50659 0.5065855 2523 B4DL66;Q9H832;H0Y9X8;D6RB11 UBE2Z Ubiquitin-conjugating enzyme E2 Z yes no 0 0 0 1.5 0.5 1 1 42.48 42.519 2 0.020806 11183 20230619_1880_Aki_TMTPro18x_K_F1 100.39 73.594 116080 97432 122760 127980 148700 162880 133930 144740 176180 77197 91852 81116 76403 70177 116990 74185 122800 86762 107400 89441 124560 127170 152050 161600 137180 147290 173390 81951 97538 81891 80499 72960 118310 75332 117190 82406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97340000 26263 2523 24665 49288;49289 39732 39732 1 9606 Homo sapiens 0.026132472569315723 TAPSGSEYR Unmodified 966.44067 0.44067401 3260 O43660-2;O43660;D6RA26 PLRG1 Pleiotropic regulator 1 yes no 0 0 0 3 0 1 30.532 30.626 2 0.00027775 5818 20230619_1882_Aki_TMTPro18x_K_F3 141.52 82.537 11826 7165.1 16052 15137 25678 28417 19048 22293 21104 12678 20873 28647 21869 22048 23949 9233.6 25541 20927 10950 6629.5 16094 14787 25723 27565 19662 22928 21346 13827 21532 28090 22409 22271 24318 10196 24390 19769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17334000 26264 3260 24666 49290 39733 39733 1 9606 Homo sapiens -0.04388870384286747 TAPTSTIAPGVVMASSPALPTQPAEEAAR Unmodified 2820.4328 0.43275844 3460 Q53X93;P16220;P16220-1;Q5U0J5;C9J896;Q4ZG78;C9JBT4;H7C1R5 CREB1 Cyclic AMP-responsive element-binding protein 1 yes no 0 0 0 7.5 0.5 1 1 58.419 58.469 3 2.925E-39 17173 20230619_1887_Aki_TMTPro18x_K_F7 204.7 195.77 7811.9 6260.6 6233.7 7280.3 6894.1 7388.8 5648.5 6636.2 7234.3 8157 8159.7 8225.3 8397.6 5796.1 8295.4 9055.2 9452.6 10108 7210.4 5741.1 6477.4 7269.7 7081.2 7448.9 5822.9 6871 7324.7 8161 8339.6 8265.4 8550 6239.9 8505.3 9102.1 9037.5 9587.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94540000 26265 3460 24667 49291;49292 39734 39734 1 9606 Homo sapiens 0.09535937301779995 TAPVQAPPAPVIVTETPEPAMTSGVYRPPGAR Unmodified 3256.6914 0.69143274 4680 Q9UKY7;A0A8I5KX85;Q9UKY7-2;D3DND1;D6R9V8;D6RFH2;Q9UKY7-3;D6RAV0 CDV3 Protein CDV3 homolog yes no 0 0 1 1.5 0.5 1 1 56.568 56.577 4 5.1267E-30 17034 20230619_1880_Aki_TMTPro18x_K_F1 176.26 176.01 39451 33814 37155 37124 33738 43904 39993 38589 47443 45779 46092 49659 53282 44403 48111 53879 50222 56785 36472 30984 37891 37321 35550 43755 40197 39986 47864 46010 47695 50055 53900 46486 49164 54137 48077 53880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 255810000 26266 4680 24668 49293;49294 39735;39736 39735 2 9606 Homo sapiens 0.153354685436625 TAPYVVTGSVDQTVK Unmodified 1563.8144 0.81443765 1628 A0A6Q8PFU3;P43034;A0A6Q8PFT2;B4DF38;I3L3N5;B4DZN3 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 0 7.5 0.5 1 1 51.207 51.284 3 5.9002E-26 14159 20230619_1887_Aki_TMTPro18x_K_F7 239.61 208.23 225320 191990 231950 256170 220550 253990 254160 247730 299270 271010 292710 289900 309470 243480 270130 313530 330670 322470 208460 176270 235060 253360 231000 256810 255740 254220 301980 273270 301320 291960 313380 256490 278950 314300 315740 306210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 475500000 26267 1628 24669 49295;49296 39737;39738;39739 39737 3 9606 Homo sapiens 0.055083004782545686 TAQAAAALR Unmodified 871.48756 0.48756462 3624 V9HWE7;P51570;Q6ZP37;K7EII7;C8CHJ5 HEL-S-19;GALK1;GALK Galactokinase yes no 0 0 0 8 0 1 36.022 36.009 2 0.0034268 7880 20230619_1888_Aki_TMTPro18x_K_F8 95.358 43.786 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26268 3624 24670 49297 39740 39740 1 9606 Homo sapiens 0.04668033957500484 TAQEVETYR Unmodified 1095.5197 0.51965261 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;J3QRQ7;J3KTQ4;C1IK54;J3QR02 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 2.5 0.5 1 1 36.932 36.988 2 4.5916E-06 8452 20230619_1881_Aki_TMTPro18x_K_F2 184.87 157.35 165430 92243 144140 180810 179890 214320 176830 183250 246420 198870 223970 205240 253630 198310 166340 176300 247190 213670 152500 85280 148980 175520 184250 213260 180590 189760 246080 200510 231870 207810 253710 203780 175170 179620 235490 202670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 423390000 26269 3137 24671 49298;49299 39741 39741 1 9606 Homo sapiens -0.024286431500058825 TAQEVETYRR Unmodified 1251.6208 0.62076364 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;J3QRQ7;J3KTQ4;C1IK54;J3QR02 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 yes no 0 0 1 4 0.816 1 1 1 32.534 32.604 3 3.1462E-07 6544 20230619_1883_Aki_TMTPro18x_K_F4 172.1 129.3 206720 178250 199520 199010 268070 237180 216700 239750 271620 233760 254020 213620 248020 201090 203740 251010 271240 212640 191160 163350 204210 199880 271280 237210 223240 244460 272880 236020 260840 217570 251220 210500 211920 249180 258460 202590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 537480000 26270 3137 24672 49300;49301;49302 39742;39743;39744 39743 3 9606 Homo sapiens 0.005018085526899085 TAQGLPGTSNSNSSR Unmodified 1475.6964 0.69644778 542 A0A024R8V6;Q9P275;B3KMW2;A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 0 0 0 7 0 1 34.351 34.427 2 0.0052168 7084 20230619_1887_Aki_TMTPro18x_K_F7 76.655 60.023 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26271 542 24673 49303 39745 39745 1 9606 Homo sapiens -0.02237259057665142 TAQGSLSLK Unmodified 903.50255 0.50254598 2400 Q5BKY2;Q6IB98;Q53HR0;Q53HG0;B3KS98;O15372;E5RJT0;E5RGU4 EIF3H;EIF3S3 Eukaryotic translation initiation factor 3 subunit H yes no 0 0 0 2.8 2.64 2 2 1 44.413 44.45 2;3 0.0016704 11271 20230619_1888_Aki_TMTPro18x_K_F8 113.62 92.158 161390 128850 165090 172820 181460 197130 180120 187630 254550 206060 227430 227000 250490 188630 184020 207950 273570 241450 149240 118330 167680 171210 187250 197260 184000 192810 253900 208010 235510 228170 251690 197030 193340 210470 260660 229100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 351500000 26272 2400 24674 49304;49305;49306;49307;49308 39746;39747;39748 39748 3 9606 Homo sapiens 0.046934810348602696 TAQNHPMLVELK Oxidation (M) 1395.718 0.71803484 3187 M0QXB0;V9GZ56;Q9Y4Z0 LSM4 U6 snRNA-associated Sm-like protein LSm4 yes no 0 1 0 7.5 0.5 1 1 43.045 43.089 3 0.00059954 10549 20230619_1887_Aki_TMTPro18x_K_F7 90.793 60.734 147650 115740 135090 155830 156930 157430 132780 146140 161080 160470 196650 175820 178270 140190 179210 182660 161260 165810 136400 106300 138670 154040 160590 158840 136270 150460 163900 161860 199140 176710 182430 148040 181260 181940 154500 157650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 207800000 26273 3187 24675 49309;49310 39749;39750 39749 1852 2 9606 Homo sapiens 0.03600454437332701 TAQNHPMLVELK Unmodified 1379.7231 0.72312022 3187 M0QXB0;V9GZ56;Q9Y4Z0 LSM4 U6 snRNA-associated Sm-like protein LSm4 yes no 0 0 0 7.5 0.5 1 1 46.4 46.466 3 1.3787E-07 12059 20230619_1888_Aki_TMTPro18x_K_F8 141.54 126.33 141010 105160 123270 123990 111290 144540 121090 126510 155330 148220 143160 136530 164170 140740 139520 158580 156320 151540 130180 96475 126530 123960 117090 144150 122630 131040 155850 148340 148310 139310 165730 145980 143340 158640 149370 144030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 297230000 26274 3187 24675 49311;49312 39751 39751 1 9606 Homo sapiens 0.04844758299964269 TAQTILEK Unmodified 902.5073 0.50729701 3316 Q6UQL6;O75792;Q6IBG3 RNASEH2A;JUNB Ribonuclease;Ribonuclease H2 subunit A yes no 0 0 0 6 0 1 46.887 46.971 2 1.019E-05 12561 20230619_1886_Aki_TMTPro18x_K_F6 158.76 53.62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26275 3316 24676 49313 39752 39752 1 9606 Homo sapiens 0.052143651776077604 TARPNITDNK Unmodified 1128.5887 0.58873523 3886 Q14315;Q14315-2;Q59H94 FLNC Filamin-C yes no 0 0 1 8 0 1 34.439 34.43 3 0.019609 7267 20230619_1888_Aki_TMTPro18x_K_F8 65.719 35.107 59852 36818 79315 29866 35546 32974 47353 49147 58661 75338 94642 99788 108670 74555 76489 59829 103730 81056 55407 33705 77968 30946 40618 33543 47538 49768 60588 75416 96010 99233 108800 77055 79737 61622 98832 76845 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11675000 26276 3886 24677 49314 39753;39754 39753 2 9606 Homo sapiens 0.029584408695427555 TASDAGFPVGSHVQYR Unmodified 1690.8063 0.80633258 858 Q6UXD5;Q8NC33;B7Z5L4;A0A0A8K8P7;X5DNZ5;X5D2T7;X5D9G4;B3KNK2;A0A087WYL5;Q6UXD5-6;Q6UXD5-2;Q6UXD5-3;Q6UXD5-5;X5D9C2;X5D7P3 SEZ6L2;PSK-1 Seizure 6-like protein 2 yes no 0 0 0 7.5 0.5 1 1 41.74 41.774 3 3.4047E-12 9951 20230619_1887_Aki_TMTPro18x_K_F7 168.69 155.89 24239 22435 20472 24078 20560 21399 23261 20998 28141 27876 32413 36078 32276 27289 35767 27901 36084 40180 22402 20548 21130 24153 21427 21850 23448 21684 28556 28052 33084 35928 33107 28487 36282 28740 34550 38018 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61099000 26277 858 24678 49315;49316 39755 39755 1 9606 Homo sapiens -0.011438337184699776 TASDVVQPAAVQAQGQVNDENR Unmodified 2296.1044 0.10436509 4460 Q9BX40;Q5TBQ0;Q5TBP9;B4DQC9;Q9BX40-3 LSM14B Protein LSM14 homolog B yes no 0 0 0 3 0 1 44.013 44.083 3 7.6492E-47 11433 20230619_1882_Aki_TMTPro18x_K_F3 265.54 259.88 16719 12180 15401 12957 21531 22507 19795 19297 23793 22093 23183 22236 20026 21276 21891 22418 23023 22920 15439 11164 15832 13156 21831 21967 20178 19997 23987 22192 23674 22535 20657 22021 22293 22540 22017 21764 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71124000 26278 4460 24679 49317 39756 39756 1 9606 Homo sapiens 0.008157082258549053 TASDVVQPAAVQAQGQVNDENRRPQR Unmodified 2833.4179 0.41792851 4460 Q9BX40;Q5TBQ0;Q5TBP9;B4DQC9;Q9BX40-3 LSM14B Protein LSM14 homolog B yes no 0 0 2 6 0 1 38.091 38.167 4 4.5338000000000003E-20 8779 20230619_1886_Aki_TMTPro18x_K_F6 152.48 133.92 11733 10287 11467 11818 13011 10699 12739 12568 13838 14258 14132 11382 12461 14950 11374 14931 13515 12943 10852 9429.1 11691 11801 13356 10960 12897 12756 14052 14234 14393 11818 12750 15283 11723 14886 12906 12316 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88275000 26279 4460 24680 49318 39757;39758 39758 2 9606 Homo sapiens 0.07455626268620108 TASEMVLADDNFSTIVAAVEEGR Unmodified 2424.1479 0.14786939 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9;Q8N3X5;O14983-2;O14983;Q7Z675;Q7Z6E5;O14983-3;B3KS35 ATP2A2;ATP2A1;DKFZp779O2152;DKFZp779G2251 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Calcium-transporting ATPase yes no 0 0 0 4.5 0.5 1 1 65.655 65.683 3 5.6522E-05 20690 20230619_1883_Aki_TMTPro18x_K_F4 72.99 63.736 11857 8634.1 8383.9 8635.8 8548 12391 10560 12231 10399 13212 14293 17430 16868 12270 13231 15627 15524 20822 10930 7910.2 8813.7 8776.7 8950.3 12237 10534 12524 10770 13416 14613 17318 16946 13020 13660 15930 14868 19703 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21245000 26280 1076 24681 49319;49320 39759 39759 1 9606 Homo sapiens -0.007238631118525518 TASFAVR Unmodified 750.40244 0.40243801 4742 Q9Y512;B4DN54;B3KUE6 SAMM50 Sorting and assembly machinery component 50 homolog yes no 0 0 0 4.5 3.5 1 1 38.953 38.946 2 0.018132 9619 20230619_1880_Aki_TMTPro18x_K_F1 107.67 28.528 213240 182010 204970 215560 334570 361950 294120 299890 440270 100450 109650 99258 101920 85553 169190 106840 131840 87609 197170 166900 210940 216810 336400 353410 303020 305200 425980 112900 127770 100600 107610 89801 168430 106160 126190 83578 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79597000 26281 4742 24682 49321;49322 39760;39761 39760 2 9606 Homo sapiens 0.01725288491718402 TASFSESR Unmodified 883.40356 0.40356022 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 2.5 0.5 1 1 33.918 33.979 2 0.00045063 7148 20230619_1882_Aki_TMTPro18x_K_F3 163.72 102.16 104360 54487 133880 110080 121630 131010 105080 123790 107780 92211 144970 157770 137760 125360 133630 62823 163120 138370 96507 50417 133180 106840 126750 130620 107190 126100 111020 96866 146770 155940 140680 127110 137160 68629 155610 130720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166750000 26282 161 24683 49323;49324 39762 39762 1 9606 Homo sapiens -0.04280541930029358 TASFSESRADEVAPAK Unmodified 1664.8006 0.8005785 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 1 4 0 1 41.84 41.883 3 1.8715E-08 10344 20230619_1883_Aki_TMTPro18x_K_F4 139.58 103.55 52956 71747 56994 38795 54516 34836 40865 51290 32922 50350 51546 36999 40506 29971 48254 58889 52805 35738 49198 65357 57361 42024 56223 36098 41852 51189 34818 50453 51448 38021 42029 32671 49239 57384 50362 34252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29437000 26283 161 24684 49325 39763 39763 1 9606 Homo sapiens -0.005229770208188711 TASFVAR Unmodified 750.40244 0.40243801 146 A0A024R1K8;Q15459;Q15459-2;F8WB66 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 5.33 3.09 1 1 1 37.311 37.304 2 0.0043977 8398 20230619_1888_Aki_TMTPro18x_K_F8 148.54 40.881 477120 355580 430500 486330 593110 641490 574560 570220 739850 461290 528480 475880 502130 413170 492470 432020 630280 494560 440570 326710 444010 482210 602960 635120 585170 584470 735000 473090 550660 480530 513020 429440 508130 437580 600780 469570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281500000 26284 146 24685 49326;49327;49328 39764;39765;39766 39766 3 9606 Homo sapiens 0.01725288491718402 TASHGDLIR Unmodified 968.50394 0.50394297 858 Q6UXD5;Q8NC33;B7Z5L4;A0A0A8K8P7;X5DNZ5;X5D2T7;X5D9G4;B3KNK2;A0A087WYL5;Q6UXD5-6;Q6UXD5-2;Q6UXD5-3;Q6UXD5-5;X5D7P3;H3BN26 SEZ6L2;PSK-1 Seizure 6-like protein 2 yes no 0 0 0 4.5 0.5 1 1 29.901 29.973 3 4.7585E-07 5538 20230619_1883_Aki_TMTPro18x_K_F4 166.07 145.37 74657 54432 66009 60408 52392 45873 57107 60309 66945 68054 104590 103150 79765 88082 106850 68211 108610 105400 68920 49913 67505 60388 55565 47882 57692 60853 69057 69407 104480 102590 83602 90244 108050 71084 103880 99723 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69273000 26285 858 24686 49329;49330 39767;39768 39767 2 9606 Homo sapiens 0.01843115123631378 TASNIGGFNAAIK Unmodified 1262.6619 0.66190017 1761 A0A8I5KY07;A0A8I5KRP1;A0A8I5KRK1;A0A8I5KYQ0;A0A8I5KZB3;Q9H2M9;A0A8I5QJC9;A0A8I5KSQ5;A0A8I5KWJ9;A0A8I5QJG4 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 2 0 1 51.331 51.376 3 0.017096 15050 20230619_1881_Aki_TMTPro18x_K_F2 60.901 37.983 162310 142710 152010 156560 143570 174850 162640 162920 193580 173560 165800 156430 172830 151990 178740 180840 195030 196170 150070 130760 155190 157270 150500 175160 163860 167540 194340 174380 171700 159480 176520 158490 182560 182120 186450 186160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196900000 26286 1761 24687 49331 39769 39769 1 9606 Homo sapiens 0.04107569592156324 TASNVEEAFINTAK Unmodified 1493.7362 0.73618733 473 A0A024R7V6;P61019;P61019-2;A0A0A1HAW1;H7C125 RAB2;RAB2A Ras-related protein Rab-2A yes no 0 0 0 5 0.816 1 1 1 56.645 56.692 3 5.8818E-12 16679 20230619_1886_Aki_TMTPro18x_K_F6 184.17 159.45 278990 233640 328680 286280 334730 306770 331020 333580 334600 304210 321600 315550 344750 310140 367190 372440 368810 365750 258400 214330 329490 285240 346410 309450 334240 338120 340170 309380 331700 319860 352320 323310 373110 372900 352840 347480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1888899999.9999998 26287 473 24688 49332;49333;49334 39770;39771 39771 2 9606 Homo sapiens 0.009068678930361784 TASQGPQTDSVIQNSENIK Unmodified 2015.976 0.97597668 1383 E9PMR6;A0A2X0SFF5;Q9NZN5-2;Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 0 0 0 5 0 1 47.392 47.468 3 0.039684 12662 20230619_1885_Aki_TMTPro18x_K_F5 44.047 32.433 17482 14341 15578 16107 17217 19034 19521 18000 22747 19363 19954 21292 23695 21932 18452 20238 23496 22525 16151 13145 16013 16165 17824 19006 19641 18500 22874 19567 20773 21542 23833 22508 19142 20491 22426 21373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21859000 26288 1383 24689 49335 39772 39772 1 9606 Homo sapiens 0.008627729827821895 TASQGQWGR Unmodified 989.46789 0.46789181 338 Q9UBM7;A0A804HJQ7;A8K0D2;A0A1Y1B909;X5DNI9;A0A024R5F7;A0A804HI25;A0A8I5KRR9;E9PJ54;A0A0S2Z3N8;E9PIP9;E9PQ71;X5D9E1;E9PRL8;A0A0S2Z3S3;X5DRD7;A0A804HJI8;A0A804HL56;A0A0S2Z3U5 DHCR7 7-dehydrocholesterol reductase yes no 0 0 0 6.5 1.12 1 1 1 1 33.598 33.648 2 1.1003E-05 6734 20230619_1887_Aki_TMTPro18x_K_F7 171.53 148.51 130230 96633 159130 138540 130120 136940 147370 160840 169310 133230 164080 132970 184130 141520 140640 89459 191300 127690 120570 88837 158670 136500 137800 139120 148390 161890 170890 136170 169210 135320 185140 143100 146240 93088 182110 121110 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 165250000 26289 338 24690 49336;49337;49338;49339 39773;39774;39775 39774 3 9606 Homo sapiens -0.027263420532335658 TASTNNIAQAR Unmodified 1145.5789 0.57889882 4653 Q9UBI6 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 yes yes 0 0 0 6 0.816 1 1 1 31.999 32.067 2 6.2145E-06 6532 20230619_1886_Aki_TMTPro18x_K_F6 157.78 143.36 27030 12849 36887 34822 53531 56563 38482 49228 44876 33711 46303 53931 46969 41762 46800 22660 51433 47206 25004 11962 36882 33600 53845 55328 39908 50341 45384 35525 47528 53358 47917 42485 47706 24541 49137 44592 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 48790000 26290 4653 24691 49340;49341;49342 39776;39777;39778 39777 3 9606 Homo sapiens 0.011932528641864337 TASTSFTNIAYDLCAK Unmodified 1761.8244 0.82435041 1757 K7EP71;A0A8I5KR52;A0A8I5QKN0;A0A8I5KW95;B3KN15;Q7LGA3-3;Q7LGA3-2;Q7LGA3 HS2ST1 Heparan sulfate 2-O-sulfotransferase 1 yes no 0 0 0 1 0 1 61.564 61.564 3 2.8316E-07 19109 20230619_1880_Aki_TMTPro18x_K_F1 120.92 106.67 35459 28457 28073 35378 24183 31621 34337 36318 39817 40411 44607 43694 36991 39908 41754 39711 45426 49192 32728 26112 29126 35108 25762 32357 34210 36890 40427 40714 45211 44073 38281 41257 42567 40450 43454 46608 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63919000 26291 1757 24692 49343 39779 39779 1 9606 Homo sapiens -0.026088795786563423 TASVFLLEK Unmodified 1006.5699 0.56989727 4368 Q96J01;D6RGZ2;Q96J01-2 THOC3 THO complex subunit 3 yes no 0 0 0 8 0 1 59.21 59.252 3 0.014717 17479 20230619_1888_Aki_TMTPro18x_K_F8 72.243 42.058 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26292 4368 24693 49344 39780 39780 1 9606 Homo sapiens 0.06687511245809219 TASVLSKDDVAPESGDTTVK Unmodified 2019.0008 0.0007944461 3325 O76021;J3QSV6;A0PJ61;Q32Q62;O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 1 4.2 0.748 1 2 2 48.441 48.503 3;4 3.2561E-11 13104 20230619_1885_Aki_TMTPro18x_K_F5 130.89 113.29 338470 295100 313420 337230 309860 305970 346360 332570 261790 444790 409470 306810 391080 283460 324540 354190 321560 232860 312910 270490 320510 336830 322620 312610 344730 340910 278180 438860 411650 317070 396070 297070 331160 348010 307090 222780 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 733540000 26293 3325 24694 49345;49346;49347;49348;49349 39781;39782;39783 39783 3 9606 Homo sapiens 0.032054080654233985 TASVPLDAVR Unmodified 1027.5662 0.56620887 2259 B2R894;Q96DV4 MRPL38 39S ribosomal protein L38, mitochondrial yes no 0 0 0 6 0 1 44.42 44.509 2 0.0069785 11492 20230619_1886_Aki_TMTPro18x_K_F6 85.716 66.622 159710 151630 193820 190870 213850 225110 225290 244930 271570 185070 204990 200680 199440 192780 215370 187880 223070 175640 148090 139070 194350 190040 220710 225480 227930 247160 271100 190860 213250 202810 204680 198720 218980 188340 213030 167120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112540000 26294 2259 24695 49350 39784 39784 1 9606 Homo sapiens 0.05352841471949432 TASWLAAELSK Unmodified 1175.6186 0.61863837 3102 Q9NUU7;I3L0H8;Q9UMR2;Q9UMR2-4;Q9UMR2-2;A0A0U4B4U6;F6QDS0;H3BQK0;Q53G16;Q7Z4W5;Q9HBZ9;Q2NL95;B4DS24;Q69YM2;I3L352;Q68DY7;B4DL69;A0A024QZ90;Q59FQ9;Q9UMR2-3;Q9NUU7-2 DDX19A;DDX19B;DKFZp762C1313;DKFZp686C21137;hCG_1998531 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B yes no 0 0 0 1 0 1 61.779 61.779 2 6.3426E-05 19226 20230619_1880_Aki_TMTPro18x_K_F1 141.1 110.02 30632 26242 30278 30052 26838 39401 36610 33944 36273 38598 33952 33653 34963 33182 34569 40000 36433 36726 28330 24055 30752 30165 28479 38985 36332 35174 36900 38612 34996 34374 35659 34589 35293 39890 34843 34916 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19245000 26295 3102 24696 49351 39785 39785 1 9606 Homo sapiens 0.03785379814871703 TATAGPGTTK Unmodified 903.46616 0.46616048 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 7 0 1 34.119 34.2 2 0.0012523 6993 20230619_1887_Aki_TMTPro18x_K_F7 125.97 84.521 7249.3 2730.3 11485 13205 22080 18982 11969 20918 9069.9 4981.6 16428 22586 8258.2 13457 19824 1648.9 18325 14953 6713.1 2589.5 11475 12527 21763 18784 12597 20788 9670.8 6407.5 16215 21790 9276 13532 19768 2655.6 17525 14074 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5175800 26296 630 24697 49352 39786 39786 1 9606 Homo sapiens 0.010566041381594005 TATDEAYKDPSNLQGK Unmodified 1736.8217 0.82170787 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;A0A994J7B0;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 5 0.816 1 1 1 44.19 44.262 3 0.00014559 11381 20230619_1886_Aki_TMTPro18x_K_F6 93.424 83.503 68907 58277 60746 66203 72093 71797 77019 72369 78586 88288 93322 83117 80029 66663 82557 70249 82311 67578 63667 53419 62586 66299 74062 72231 77418 74321 80592 88184 94416 84034 82192 69505 83817 70446 78655 64268 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 356900000 26297 1022;3868 24698 49353;49354;49355 39787;39788 39788 2 9606 Homo sapiens -0.017230117119424904 TATEEWGTEDWNEDLSETK Unmodified 2239.9393 0.9393164 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;Q5VU77;Q5VU79;Q5VU78;Q14157-1;Q14157-4;B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like no no 0 0 0 2.5 0.5 1 1 59.878 59.898 3 1.7383E-10 18547 20230619_1881_Aki_TMTPro18x_K_F2 135.08 132.15 40991 36432 38391 40070 35591 45201 48600 46951 49208 51311 44560 44571 50745 41870 45142 52704 50089 47749 37903 33379 39199 40254 37580 45353 48260 47953 49940 51411 46214 45464 51325 43859 46316 52492 47861 45413 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199520000 26298 3877;3878 24699 49356;49357 39789 39789 1 9606 Homo sapiens -0.13105568424407465 TATESFASDPILYR Unmodified 1569.7675 0.76748745 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;H3BTN5;A0A8V8TMM5;A0A024R609;H3BQ34;H3BUW1;H3BTJ2;H3BT25;V9HWB8;P14618;A0A8V8TNX9;P14618-3 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 4.75 0.433 1 3 54.466 54.507 2;3 3.7629E-16 15996 20230619_1883_Aki_TMTPro18x_K_F4 209.97 185.74 102580 77762 113010 98996 70208 116030 104130 94623 121010 140990 136620 130530 146550 128500 144010 142170 154730 195800 94890 71388 113250 98472 77516 115460 103610 99402 123020 139710 139860 132900 149160 133450 147080 145630 148220 185250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 299450000 26299 370;3451 24700 49358;49359;49360;49361 39790;39791;39792 39790 3 9606 Homo sapiens 0.005394409271502809 TATESFASDPILYRPVAVALDTK Unmodified 2464.285 0.28495522 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;H3BTN5;A0A8V8TMM5;A0A024R609;H3BQ34;H3BUW1;H3BTJ2;H3BT25;V9HWB8;P14618;A0A8V8TNX9;P14618-3 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 1 4 3 1 1 62.033 62.051 3 1.0463E-34 19305 20230619_1880_Aki_TMTPro18x_K_F1 214.17 202.21 517610 409400 460620 514680 485340 593000 573500 584610 567200 733420 718300 721280 768890 668500 682110 852030 695830 812770 478080 375730 473480 512110 504980 593350 573110 601630 585010 732540 732130 731140 778990 700940 696900 850560 666440 771960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 740550000 26300 370;3451 24701 49362;49363 39793;39794 39793 2 9606 Homo sapiens 0.11138413829985438 TATFQQR Unmodified 850.42972 0.42971539 4336 Q96DI9;Q9BY77;F6VRR5;B4E0L0;Q9BY77-2;F8WCX5;Q659C6;B4DSH9;Q6R954;Q8WUT1 POLDIP3;DKFZp434G0310;PDIP46 Polymerase delta-interacting protein 3 yes no 0 0 0 7 0.816 1 1 1 33.068 33.11 2 0.077874 6559 20230619_1887_Aki_TMTPro18x_K_F7 73.637 54.15 52396 28250 69466 74510 99494 122090 76748 94988 107060 33921 44505 36624 27415 30918 62443 25433 49251 36506 48477 26265 69641 71940 100470 119060 79638 97200 104620 37786 47863 36927 30265 31774 61940 26390 47163 34603 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29964000 26301 4336 24702 49364;49365;49366 39795 39795 1 9606 Homo sapiens -0.001482279679066778 TATGLTHIIETR Unmodified 1311.7147 0.71466402 4140 Q709C8-4;Q709C8-2;Q709C8-3;Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes no 0 0 0 7 0 1 44.478 44.561 3 0.00010173 11133 20230619_1887_Aki_TMTPro18x_K_F7 110.9 93.903 58312 55533 63627 59358 70970 72112 69559 66388 71584 51351 50305 41968 45848 36405 52644 49193 49087 46149 54015 50855 64269 59835 73023 71856 70275 67816 71918 52452 52389 42888 47247 38431 53196 49071 46980 43876 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44480000 26302 4140 24703 49367 39796 39796 1 9606 Homo sapiens 0.07127527655006816 TATGPSTGGGTVISR Unmodified 1360.6947 0.69465686 2998 H0Y5I5;F8WCX2;Q8N1G0-2;Q8N1G0 ZNF687 Zinc finger protein 687 yes no 0 0 0 7.33 0.471 2 1 36.2 36.227 2 3.4699999999999996E-19 7970 20230619_1888_Aki_TMTPro18x_K_F8 216.68 186.07 15744 10880 13148 15559 15319 18689 16567 16348 16915 17229 23186 20954 20795 17574 17595 25156 22076 20308 14524 10005 13622 15360 15792 18597 16646 16888 17453 17478 23369 21016 21148 18628 18238 24864 21067 19346 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30428000 26303 2998 24704 49368;49369;49370 39797;39798 39798 2 9606 Homo sapiens 0.02873731924387357 TATITEPR Unmodified 887.47125 0.47124585 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 3.5 0.5 1 1 35.067 35.122 2 0.0036592 7626 20230619_1882_Aki_TMTPro18x_K_F3 118.74 88.025 138930 79902 159510 174510 210770 228520 172310 187530 234410 152850 223420 232710 201750 179990 205580 106390 255960 229730 128390 73991 161160 168930 213870 225850 177930 193480 234500 158930 228860 230640 206880 183620 211170 115350 244230 216990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 164390000 26304 2436 24705 49371;49372 39799;39800 39799 2 9606 Homo sapiens 0.023009080007568627 TATPEIVDNKDGTVTVR Unmodified 1814.9374 0.93740633 3299 O75369-8;O75369-2;O75369-9;O75369;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 1 5 0 1 46.147 46.224 3 1.0471E-07 12147 20230619_1885_Aki_TMTPro18x_K_F5 131.56 100.56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26305 3299 24707 49373 39801 39801 1 9606 Homo sapiens 0.06253512138846418 TATPQQAQEVHEK Unmodified 1465.7161 0.71612058 3674 V9HWK1;P60174;P60174-3;B4DUI5;Q53HE2;P60174-4;U3KPZ0 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 3.5 1.12 1 1 1 1 33.773 33.839 3 1.0431E-15 7153 20230619_1883_Aki_TMTPro18x_K_F4 181.77 150.94 64471 35617 79633 85132 128770 151400 90491 107630 114410 80078 133170 139180 122870 107040 124610 51485 135340 126970 59610 33044 80410 82621 128920 146910 94255 112180 115790 84282 135340 137400 125800 108600 126850 57115 129330 119830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4467100000 26306 3674 24708 49374;49375;49376;49377 39802;39803 39803 2 9606 Homo sapiens 0.0018911695308361232 TATQLAVNK Unmodified 944.5291 0.52909508 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;F8WAM2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 4.5 3.5 1 1 42.849 42.85 2 5.8107E-12 10625 20230619_1888_Aki_TMTPro18x_K_F8 229.58 152.75 349980 182250 395650 387190 543680 590630 438970 531340 536290 217010 295410 267590 249290 202120 370240 135760 278090 210730 323230 168780 400260 376470 550150 579930 451780 538100 530190 238190 312480 267280 261570 207270 367930 142510 266500 199600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 310770000 26307 4005 24709 49378;49379 39804;39805;39806 39806 3 9606 Homo sapiens 0.054611699261727153 TATTQETDGFQVK Unmodified 1424.6783 0.6783381 119 Q96GM5;A0A024R102;A0A024R137;Q96GM5-2;F8VRQ4;A8K9I5;F8VUB0;F8VZ70 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 0 0 0 4 0 1 46.067 46.11 2 2.6921E-05 12224 20230619_1883_Aki_TMTPro18x_K_F4 143.89 118.67 16506 15431 17179 17589 17767 19302 14969 17740 24642 21307 27768 24667 22978 20632 23683 22794 25556 26412 15282 14140 17402 17613 18350 19359 15571 18321 24659 21454 28108 24763 23643 21529 24169 23078 24440 25045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16032000 26308 119 24710 49380 39807 39807 1 9606 Homo sapiens -0.01701394032374992 TAVAHRPGAFK Unmodified 1153.6356 0.63562584 4314 Q969H8 MYDGF Myeloid-derived growth factor yes yes 0 0 1 4.5 0.5 1 1 33.157 33.227 4 0.00016316 6820 20230619_1883_Aki_TMTPro18x_K_F4 125.97 86.31 778470 568920 636730 773890 824050 812210 904930 825100 863730 796850 897590 891680 789790 659110 867340 1001200 1010300 839360 718270 522750 662250 764940 842540 818800 906110 841620 883280 809570 914890 893580 813310 705310 889190 991170 964050 799570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 793650000 26309 4314 24711 49381;49382 39808 39808 1 9606 Homo sapiens 0.06495345211351378 TAVAPIER Unmodified 855.48142 0.48141661 3439;3388;1072 A0A0S2Z3H3;P12235;A8K787;V9GYG0;A0A0S2Z359;Q9H0C2;P05141;Q6NVC0;P12236;Q6I9V5;Q59EI9 SLC25A4;SLC25A31;SLC25A5;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 0 0 4 1.41 1 1 1 1 1 36.815 36.879 2 0.0022496 8238 20230619_1883_Aki_TMTPro18x_K_F4 129.72 91.399 1234200 925010 1073500 1211600 1438300 1469800 1518400 1452500 1893100 1473800 1605400 1532600 1813400 1421300 1416800 1532100 1801200 1527900 1139400 849490 1110300 1203200 1467200 1466400 1537000 1485500 1894800 1491100 1668800 1549800 1824900 1476200 1469300 1537500 1717700 1452300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4352800000 26310 1072;3388;3439 24712 49383;49384;49385;49386;49387 39809;39810;39811 39810 3 9606 Homo sapiens 0.047895157259858934 TAVAPSAVNLADPR Unmodified 1380.7361 0.73612775 1230 Q9UQ35;A0A140VK53;O60382;I3L3Q8;A0AUK8 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 6.67 0.471 1 2 46.977 47.062 2;3 1.1443E-08 12209 20230619_1887_Aki_TMTPro18x_K_F7 115.1 93.014 52184 39986 48466 50356 55140 58121 51153 47230 61129 58982 59666 56202 61752 52727 54379 65175 59415 65917 48206 36703 49646 50096 56641 57945 52118 49330 61671 58920 61348 57083 62612 55169 55767 65304 56844 62576 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68186000 26311 1230 24713 49388;49389;49390 39812;39813 39813 2 9606 Homo sapiens 0.060989126837057483 TAVCDIPPR Unmodified 1027.5121 0.51206481 3748;1486;3381;1424;3870;3970 A0A384MEE3;Q9BVA1;A0A024QZU2;O43209;B7Z4N1;Q9UGA2;A6NNZ2;P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;B4DQN9;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;B4DMJ5;Q6P602;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;Q13885;B2R6L0;Q3ZCM7;A0A075B736;Q5SQY0;P04350;B4DJ43;B4DE77;B4DFH6 TUBB2B;DKFZp566F223;TUBB;TUBB2C;TUBB4B;TUBB2A;TUBB8;TUBB4A Tubulin beta-2B chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-8 chain;Tubulin beta-4A chain no no 0 0 0 5.45 1.16 3 3 2 3 40.483 40.554 2 8.4938E-05 9505 20230619_1885_Aki_TMTPro18x_K_F5 158.07 125.23 3316000 2545600 2977800 3118000 3201800 3478300 3290500 3169600 3832600 3768800 4263500 4166800 4212500 3593300 3667900 4168200 4803500 4331500 3062500 2335900 3057000 3106600 3311400 3483400 3330000 3276100 3890700 3789300 4350500 4193100 4276000 3755900 3804500 4187400 4581700 4114100 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 18 4566300000 26312 1424;1486;3748;3870;3970;3381 24714 49391;49392;49393;49394;49395;49396;49397;49398;49399;49400;49401 39814;39815;39816;39817;39818;39819;39820;39821;39822;39823;39824;39825;39826;39827;39828;39829;39830;39831;39832 39822 19 9606 Homo sapiens -0.0005907395127451309 TAVDGPDLEMLTGQER Unmodified 1730.8145 0.814514 467;2262 A0A024R7P2;B7Z6M0;Q14318;B2R8G6;Q14318-2;M0R2K9 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8;Peptidyl-prolyl cis-trans isomerase no no 0 0 0 2 0 1 57.981 57.996 2 1.3232000000000001E-20 17802 20230619_1881_Aki_TMTPro18x_K_F2 240.59 223.57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26313 467;2262 24715 49402 39833 39833 1 9606 Homo sapiens -0.02166067584062148 TAVDSLVAYSVK Unmodified 1251.6711 0.67106787 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 8 0 1 58.73 58.772 3 0.00012484 17295 20230619_1888_Aki_TMTPro18x_K_F8 107.85 91.273 38376 33006 37178 42287 40111 48272 48361 48307 58614 43513 49353 53655 49069 46615 59929 56672 58645 63192 35487 30288 37954 42016 41697 48341 48585 49223 58702 44568 51118 53785 50647 48829 60661 57163 56155 59934 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190850000 26314 673 24716 49403 39834 39834 1 9606 Homo sapiens 0.05529918157822067 TAVEFLSK Unmodified 893.48583 0.48583328 3081 H7BXY3;Q7L2E3-3;Q7L2E3;Q7L2E3-2;Q6W6M7 DHX30 Putative ATP-dependent RNA helicase DHX30 yes no 0 0 0 8 0 1 54.069 54.14 2 0.0074893 15333 20230619_1888_Aki_TMTPro18x_K_F8 107.47 64.439 109010 98337 102520 112890 97411 119970 124260 120220 142530 133010 142700 144250 145200 114960 132560 153790 155690 152980 100810 90128 104690 112920 102430 120770 124290 123160 144130 134080 146520 144960 147480 121640 136410 153810 148720 145320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48208000 26315 3081 24717 49404 39835 39835 1 9606 Homo sapiens 0.03482980148919523 TAVETAVLLLR Unmodified 1184.7129 0.71287311 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 1.5 0.5 1 1 62.446 62.451 2 5.8203E-12 19701 20230619_1881_Aki_TMTPro18x_K_F2 204.34 153.46 676680 566120 590950 670640 530310 675390 613030 607120 680200 721660 730240 759900 761940 628380 687480 781050 781690 852980 625130 519150 607070 668730 558840 680940 615640 628230 691430 724270 748450 765130 773010 660820 706130 786150 747500 809140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 857780000 26316 2435 24718 49405;49406 39836 39836 1 9606 Homo sapiens 0.12790518637052628 TAVHAGNINFK Acetyl (Protein N-term) 1212.6251 0.62512073 1411 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;E5RIB1;E5RGY6;E5RG03;E5RHV7;E5RJL0;E5RIE0;E5RFM3;E5RIT8;E5RJZ2 CTNNA1 Catenin alpha-1 yes no 1 0 0 7 0 1 46.215 46.303 2 8.6092E-06 11870 20230619_1887_Aki_TMTPro18x_K_F7 84.568 60.233 110370 94099 113360 95741 108780 130540 132080 130220 144150 154570 116740 125240 149950 108260 119540 177550 160910 146110 102100 86169 114760 97117 114050 129370 132190 133620 145250 153990 122570 127910 150480 115970 124690 175360 153460 139160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181870000 26317 1411 24719 49407 39837 39837 1 9606 Homo sapiens 0.027313177662790622 TAVNVPR Unmodified 755.42899 0.42898711 758 A0A024RDE8;Q96HC4;B7Z481;Q4W5K9;Q9P1D1 PDLIM5;LIM PDZ and LIM domain protein 5 yes no 0 0 0 7 0.816 1 1 1 34.697 34.735 2 0.03933 7199 20230619_1887_Aki_TMTPro18x_K_F7 91.041 42.537 66831 37657 74730 48606 70565 78661 73285 80494 78650 67425 79723 74974 89902 68638 66291 48865 97003 79609 61737 34625 75035 48645 73680 77281 73956 81686 79831 69080 82135 75526 90276 70055 69404 51212 92394 75351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62873000 26318 758 24720 49408;49409;49410 39838 39838 1 9606 Homo sapiens 0.04148977383044894 TAVRPITER Unmodified 1041.5931 0.59309232 3003 Q59EU2;Q6P2J5;Q7Z5U3;Q3ZCX5;G3V0F5;Q0D2I6;Q9UHY8;Q9UHY8-2 FEZ2 Fasciculation and elongation protein zeta-2 yes no 0 0 1 7.5 0.5 1 1 31.024 31.078 3 0.0063602 6025 20230619_1888_Aki_TMTPro18x_K_F8 73.196 29.338 103590 62958 100810 113940 153840 149440 129990 131110 150830 100070 130520 142900 128610 120380 139850 87509 151750 128310 95608 58108 103490 111230 154830 147960 133060 134390 151510 104200 134910 142280 131950 123160 142360 90951 144920 121530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29846000 26319 3003 24721 49411;49412 39839;39840 39839 2 9606 Homo sapiens 0.073959500831279 TAVTTVPSMGIGLVK Unmodified 1472.8273 0.82725094 2351 B3KMF8;Q8WUH6 TMEM263 Transmembrane protein 263 yes no 0 0 0 4 0 1 60.745 60.747 3 9.2989E-09 18611 20230619_1883_Aki_TMTPro18x_K_F4 144.27 116.3 48390 48868 60356 49973 42676 46932 46902 47082 41861 50419 44091 46008 60771 50450 48484 68220 58984 62516 44902 44726 59976 50395 45786 47726 46952 48189 43096 50630 45881 47095 60913 52839 50207 67886 56358 59425 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50972000 26320 2351 24722 49413 39841 39841 1 9606 Homo sapiens 0.10975040336825259 TAVVVGTITDDVR Unmodified 1344.7249 0.72489436 32 Q0QEW2;H0YHA7;A0A024QZD1;J3QQ67;Q07020-2;Q07020;G3V203;F8VUA6;F8VYV2;B4DDY5;A0A075B7A0 RPL18 60S ribosomal protein L18 yes no 0 0 0 4 0.707 1 2 1 53.076 53.119 2;3 1.5803000000000002E-35 15403 20230619_1883_Aki_TMTPro18x_K_F4 267.85 238.77 570650 497520 499060 575440 571080 621790 628480 602470 639310 684430 711030 674190 806420 670020 596780 788220 781770 809580 527340 456070 514500 575380 589010 624940 630680 619090 653910 686990 729880 685070 810050 697710 621800 790820 746400 768610 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5689600000 26321 32 24723 49414;49415;49416;49417 39842;39843;39844 39843 3 9606 Homo sapiens 0.06632090589550899 TAWGQQPDLAANEAQLLR Unmodified 1981.0017 0.0017379196 179 Q53GN6;A0A024R201;Q9UNM6;J3KNQ3;B2RBM7;Q9Y6E3;Q9UNM6-2;B4DJ66;H0YD73;E9PL38;Q9UNM7 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 6 0 1 59.174 59.24 2 7.221E-52 17801 20230619_1886_Aki_TMTPro18x_K_F6 264.29 238.28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26322 179 24724 49418 39845 39845 1 9606 Homo sapiens 0.05047712015743855 TAWLDGK Unmodified 789.4021 0.40210366 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 0 0 7.2 0.748 1 2 2 51.34 51.417 2;3 0.0056045 14202 20230619_1887_Aki_TMTPro18x_K_F7 105.39 38.359 1682300 1589300 1692200 1538000 1833300 2159200 2042600 2006700 2369300 2342400 2550500 2597600 2536300 2097500 2293500 2506600 2793600 2596500 1557100 1454300 1719800 1567000 1899900 2133300 2057500 2068900 2402400 2357000 2607800 2608200 2577400 2202000 2365100 2516900 2666700 2466000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2620900000 26323 1716 24725 49419;49420;49421;49422;49423 39846;39847;39848 39847 3 9606 Homo sapiens -0.0010213122814093367 TAWNPLGEAAPPGELYR Unmodified 1840.9108 0.91079765 2232 B2R6A9;Q9BW71-2;Q9BW71;B3KQL0 HIRIP3 HIRA-interacting protein 3 yes no 0 0 0 7 0 1 60.884 60.927 2 1.5601E-14 18202 20230619_1887_Aki_TMTPro18x_K_F7 213.52 197.66 21101 17799 20956 22260 15621 24557 21400 22252 26350 32795 29423 27375 33029 26202 26674 34451 29136 33908 19514 16331 21237 22142 16868 24587 21407 23166 26720 32408 30181 28002 33279 27519 27417 34432 27886 32194 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51470000 26324 2232 24726 49424 39849 39849 1 9606 Homo sapiens 0.0239786803822426 TAWVFDDK Unmodified 980.46035 0.46034682 3389 Q53XC0;P05198;H0YJS4;G3V4T5 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 6.2 0.748 1 2 2 56.726 56.789 2;3 0.0018656 16564 20230619_1885_Aki_TMTPro18x_K_F5 135.83 89.265 303420 244850 275720 281450 249850 300000 304000 282040 297650 328720 303150 317330 360310 293510 322440 354100 337320 343450 280330 224500 282070 281550 263200 301550 303220 290700 304080 329320 313420 321820 364030 306820 329540 354200 322640 326300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 631980000 26325 3389 24727 49425;49426;49427;49428;49429 39850;39851;39852 39850 3 9606 Homo sapiens -0.030664943735246197 TAYSGGAEDLER Unmodified 1267.5681 0.56805936 4716 Q9Y6G0;Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 yes no 0 0 0 1 0 1 39.503 39.503 2 0.00019396 9870 20230619_1880_Aki_TMTPro18x_K_F1 117.09 103.64 34353 24123 31629 34290 33240 41950 36780 31609 43982 39478 47492 52959 54186 47122 38441 57456 56868 65304 31716 22180 32404 33872 34551 41580 37093 33242 44521 39913 48871 52963 54366 49345 40491 57948 54291 61912 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38421000 26326 4716 24728 49430 39853 39853 1 9606 Homo sapiens -0.0550219430076595 TCATDLQTK Unmodified 1036.4859 0.48590964 3362 V9HWF9;O95861-4;O95861;A6NF51;O95861-2;F8W1J0;F8VVW8;F8VZG4 HEL20;BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes no 0 0 0 5.5 0.5 1 1 39.756 39.846 2 4.5118E-08 9442 20230619_1885_Aki_TMTPro18x_K_F5 200.86 150.73 51780 25964 58855 75831 95684 112320 74269 92880 87282 55825 78873 103140 80298 83060 83253 44973 102910 106310 47818 24205 59864 72807 95951 110220 76557 95192 87749 59892 81568 101750 82170 84321 85467 49373 98295 100310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36858000 26327 3362 24729 49431;49432 39854;39855 39854 2 9606 Homo sapiens -0.030873879134105664 TCATTIAYPHEVVR Unmodified 1616.7981 0.79807608 1422 J3KQA4;A0A384MEA9;Q96CQ1-4;Q96CQ1 SLC25A36 Solute carrier family 25 member 36 yes no 0 0 0 7 0 1 41.265 41.336 3 0.00077591 9792 20230619_1887_Aki_TMTPro18x_K_F7 84.759 70.069 56130 45433 58285 61096 59250 64412 69717 64132 83378 73155 82355 83599 79453 76916 79384 80188 83230 79192 51915 41723 59067 60452 61745 64871 70095 65802 84078 73797 84435 84163 81243 79680 80939 80489 79569 75243 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13637000 26328 1422 24730 49433 39856;39857 39856 2 9606 Homo sapiens 0.014348960404959143 TCAYTNHTVLPEALER Unmodified 1873.8992 0.89924668 3432;1055 B4DRW6;B2RB32;A0A0M4FEM1;P11217;P11217-2;Q59GM9;P11216;B4DSD8 PYGM;PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, muscle form;Glycogen phosphorylase, brain form no no 0 0 0 5.5 0.5 1 1 45.994 46.076 3 4.2213000000000005E-34 12064 20230619_1885_Aki_TMTPro18x_K_F5 259.29 213.94 174030 134110 170760 179020 157110 199830 180110 171930 207360 228010 234650 263890 252690 244810 212660 280560 301820 340210 160840 123170 173610 177330 165130 199770 181170 179120 210910 228540 240420 265550 255720 255000 222250 284470 288190 322360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 615450000 26329 1055;3432 24731 49434;49435 39858;39859 39858 2 9606 Homo sapiens -0.002746970473936017 TCCTDWGQFFLIQEK Unmodified 1931.8546 0.85460468 241 U3KQL4;B4DUH2;A0A024R3F7;B4DPL8;A8K0S7;U3KPU7;Q6IBR9;A0A024R3H9;U3KQS2;A0A024R3L1;O43826;O43826-2;Q59GT3;B7Z2Q7 SLC37A4 Glucose-6-phosphate translocase yes no 0 0 0 8 0 1 63.852 63.875 3 0.088767 19471 20230619_1888_Aki_TMTPro18x_K_F8 45.54 37.181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26330 241 24732 49436 39860 39860 1 9606 Homo sapiens -0.0740484418511187 TCDGVQCAFEELVEK Unmodified 1783.7757 0.77568565 4557 Q9NP72;Q9NP72-2;B7Z5V3;Q5W0J0;Q9NP72-3;Q59EW3;A0A804HJJ8;A0A804HKH8;A0A804HL88;A0A804HIY1 RAB18 Ras-related protein Rab-18 yes no 0 0 0 4.5 0.5 1 1 62.945 62.971 3 6.3948E-14 19585 20230619_1883_Aki_TMTPro18x_K_F4 172.82 160.67 53576 41868 51938 49572 38490 50725 48080 50897 57503 64396 54530 64255 65851 54002 57611 80060 65623 80458 49513 38404 52685 49467 41384 51198 48248 52338 57992 64334 56650 64878 66457 57435 59301 79977 62813 76361 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237910000 26331 4557 24733 49437;49438 39861 39861 1 9606 Homo sapiens -0.08485116210044907 TCDLEEFQTCLVR Unmodified 1669.744 0.74399159 1137 Q9BQ52;Q9BQ52-4;B4DT15;A0A0S2Z5M8;B3KT00;G5E9D5;B3KSU9;E7ES68;B4E365;Q9BQ52-3 ELAC2 Zinc phosphodiesterase ELAC protein 2 yes no 0 0 0 4 0 1 57.189 57.195 2 0.00031178 17177 20230619_1883_Aki_TMTPro18x_K_F4 103.91 89.751 19036 13229 20104 23674 19675 19004 21157 22281 23392 29150 20971 25535 28092 21871 21483 25958 23639 27117 17594 12200 20344 22972 20485 19641 21323 22721 23660 28965 21970 25930 28118 22915 22105 26072 22621 25731 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37961000 26332 1137 24734 49439 39862 39862 1 9606 Homo sapiens -0.06409064173340084 TCDLVGEK Unmodified 920.42733 0.42733213 3481 P20645;F5GX30;Q6I9U3;Q53GY9;B2R6S2;F5GXE0;F5GXU0;F5H883 M6PR Cation-dependent mannose-6-phosphate receptor yes no 0 0 0 3.5 0.5 1 1 43.716 43.773 2 0.010092 11172 20230619_1883_Aki_TMTPro18x_K_F4 99.802 45.394 73400 32779 69978 77619 93595 100710 89071 100400 114000 85931 109200 135750 116790 99450 102350 74744 142500 131480 67652 30445 71775 74915 95253 99979 90849 102170 114440 89155 112770 134160 118310 102530 106380 78783 135880 124320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145320000 26333 3481 24735 49440;49441 39863 39863 1 9606 Homo sapiens -0.03606444487877525 TCEESSFCK Unmodified 1146.4322 0.43215951 3900;2497 Q14697-2;Q14697-3;V9HWJ0;B4DJ30;Q14697 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 3.5 0.5 1 1 41.132 41.182 2 7.908E-06 10083 20230619_1882_Aki_TMTPro18x_K_F3 177.97 147.99 206570 117700 202970 195250 283250 303240 273940 282350 301920 247350 304330 334770 334670 287440 279200 192730 380700 356760 190620 108540 207670 192130 287540 297820 277580 288830 305930 254600 313640 333960 338060 293260 289960 204700 363110 337200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 278570000 26334 3900;2497 24736 49442;49443 39864;39865 39864 2 9606 Homo sapiens -0.13519928407413317 TCEWTGLK Unmodified 993.45897 0.45896661 223 Q6UXN9;A0A024R333 WDR82;TMEM113 WD repeat-containing protein 82 yes no 0 0 0 7.5 0.5 1 1 49.977 50.055 3 0.034181 13607 20230619_1887_Aki_TMTPro18x_K_F7 52.937 24.768 158740 137790 154860 161270 171630 206910 187700 167120 237370 201580 190170 180370 197130 160280 177630 234530 209160 208030 146810 126330 157970 161530 177600 204830 189760 174420 237080 201370 197560 183500 200060 169940 183030 232820 199810 197880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85404000 26335 223 24737 49444;49445 39866 39866 1 9606 Homo sapiens -0.038024517339295016 TCFETFPDK Unmodified 1143.4907 0.49066067 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 4 0 1 51.898 51.925 2 0.0011768 14865 20230619_1883_Aki_TMTPro18x_K_F4 105.52 83.528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26336 3432 24738 49446 39867 39867 1 9606 Homo sapiens -0.07534503770648371 TCFSPNR Unmodified 880.38614 0.38613602 2403 B4DMT5;H0YDT6;B3KSH1;O00303;B4DEW9;Q9BX72 EIF3F;IFP38 Eukaryotic translation initiation factor 3 subunit F yes no 0 0 0 7.5 0.5 1 1 34.52 34.554 2 0.026048 7288 20230619_1888_Aki_TMTPro18x_K_F8 97.068 56.147 230230 142640 192340 186490 246970 283360 248330 245460 356800 71961 62844 56207 59742 47958 122700 60071 85743 53964 212280 131100 199350 185990 252630 278180 253360 248680 344700 82136 78255 57658 64180 50404 121260 60037 82176 51436 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108930000 26337 2403 24739 49447;49448 39868;39869 39869 2 9606 Homo sapiens -0.05884160736684407 TCFVDCLIEQTHPEIR Unmodified 2016.9397 0.93973129 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 6 0.816 1 1 1 60.219 60.271 3 2.5928E-64 18244 20230619_1886_Aki_TMTPro18x_K_F6 322.99 296.21 114780 94694 112670 116910 110540 143970 129690 131350 152360 104370 110490 108100 112650 100550 115200 119550 116200 126530 106120 86878 114660 116590 115700 143170 130340 134330 152100 107140 115440 109380 115080 104960 117190 120210 111240 120060 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 947980000 26338 2436 24740 49449;49450;49451 39870;39871;39872 39871 3 9606 Homo sapiens -0.028060987192930043 TCFYAEQGGQIYDEGYLVK Unmodified 2240.0096 0.0095849934 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 61.176 61.228 3 1.8640999999999998E-19 18621 20230619_1886_Aki_TMTPro18x_K_F6 174.59 160.13 187000 163370 168920 173820 124150 143480 159380 154730 134810 217750 225090 281590 247660 216160 272170 286190 250990 304490 172850 149650 172440 174400 133460 147740 158070 159090 142660 218400 228190 280600 253180 228780 275260 287440 240720 288820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 604560000 26339 1637 24741 49452;49453 39873;39874;39875 39875 3 9606 Homo sapiens -0.0608194156970967 TCGDVLDNLK Unmodified 1133.5387 0.53867349 3636 P52788;B4DE40;P52788-2 SMS Spermine synthase yes no 0 0 0 4.5 0.5 2 2 52.988 53.033 2;3 0.0015728 15051 20230619_1885_Aki_TMTPro18x_K_F5 122.96 92.392 285940 205900 247010 254560 202730 240840 254570 240150 259910 365020 343000 365280 452220 362330 266990 489510 435610 430600 263910 189010 253540 252950 215670 244580 253980 248790 268370 362070 352720 370830 449250 380600 285290 485870 415120 409630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 541850000 26340 3636 24742 49454;49455;49456;49457 39876;39877 39877 2 9606 Homo sapiens -0.022754298506242776 TCHSFIINEK Unmodified 1247.5969 0.59685707 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 7.5 0.5 1 1 42.812 42.851 3 3.6353E-07 10630 20230619_1888_Aki_TMTPro18x_K_F8 175.49 149.45 143350 40292 118090 148960 137310 137690 145890 148780 153480 186250 179330 165600 202180 155770 129970 214470 165760 174500 131810 37973 122520 141100 141280 140170 146860 152220 157160 185520 183590 168820 202080 164150 135880 212090 158310 166130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 585980000 26341 12 24743 49458;49459 39878 39878 1 9606 Homo sapiens -0.01703748205318334 TCLDNLASK Unmodified 1020.491 0.49099502 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;B4DNP4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 6.5 0.5 2 2 47.905 47.989 2;3 0.00034319 12652 20230619_1887_Aki_TMTPro18x_K_F7 99.257 75.881 203090 180300 182090 157060 213840 253250 223860 211820 287040 212250 212420 211650 212970 180740 189950 244020 243240 210540 187730 164880 187080 161980 220160 247920 226980 219180 285670 214660 221450 213930 216350 190750 196790 242180 231990 200440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 221510000 26342 707 24744 49460;49461;49462;49463 39879;39880 39880 2 9606 Homo sapiens -0.01843084050778998 TCLICADTFR Unmodified 1255.5689 0.56892776 1672 A0A7P0PJI2;A0A7I2V5K0;P61011;G3V4F7;G3V480;B4DDS7;P61011-2;A0A7I2V584;A0A7I2V5S0 SRP54 Signal recognition particle 54 kDa protein yes no 0 0 0 7.5 0.5 1 1 51.708 51.783 2 2.4784E-05 14261 20230619_1888_Aki_TMTPro18x_K_F8 157.99 119.64 188700 146640 167600 176030 168040 188450 195970 188050 223870 181410 165650 147190 190870 154890 168340 212220 203630 179530 174270 134530 172080 175560 175350 189620 196790 191970 224110 182760 173680 151410 192960 162570 173750 210380 194330 170950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 439650000 26343 1672 24745 49464;49465 39881;39882 39882 2 9606 Homo sapiens -0.048633944570610765 TCLLISYTTNK Unmodified 1312.6697 0.66968766 614 A0A024RAA5;P60953;B4E1U9;P60953-1;A0A8Q3WLC5;A0A024R9T1;A0A024RAE6;A0A590UJK8;A0A8Q3SI43;Q5JYX0;Q9UJM1;A0A494BZX6;Q9UJM0;A0A494C1M1;A0A8Q3WKT2;A0A3B3IRV0 CDC42;hCG_39634 Cell division control protein 42 homolog yes no 0 0 0 3.5 0.5 1 1 56.601 56.606 2;3 3.9632E-07 16913 20230619_1883_Aki_TMTPro18x_K_F4 166.86 142.48 131710 104140 104170 112460 87938 120320 124230 104990 121930 120280 116030 112930 129220 106300 120900 122370 123490 100100 121550 95435 107950 113020 93822 120710 123050 108800 124130 120540 119910 114760 131040 110710 123230 121490 117970 95394 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 550300000 26344 614 24746 49466;49467 39883;39884 39884 2 9606 Homo sapiens 0.025859607974325627 TCLLIVFSK Unmodified 1079.6049 0.60490256 220;3723 P62745;P61586;A0A024R324;B4DKN9;A0A994J514;P08134;A0A024R0C8;Q5JR08;A0A7I2YQV1;Q5JR05;C9JX21;E9PQH6;C9JNR4;A0A7I2V3G1;Q5JR07;A0A0B6XK12;E9PLA2;E9PN11;Q5JR06;C9JRM1;U3KQV3;U3KQA9;A0A7I2V5E6 RHOB;RHOA;RHOC Rho-related GTP-binding protein RhoB;Transforming protein RhoA;Rho-related GTP-binding protein RhoC no no 0 0 0 5 0 1 62.982 63.029 2 0.00443 19298 20230619_1885_Aki_TMTPro18x_K_F5 102.07 69.846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26345 3723;220 24747 49468 39885 39885 1 9606 Homo sapiens 0.06828430782115902 TCLLNETGDEPFQYK Unmodified 1813.8193 0.81926503 1369 A8YXX4;A0A2R8YDT1;P15104;B4DWM6 PIG59;GLUL Glutamine synthetase yes no 0 0 0 4.5 0.5 1 1 58.438 58.467 3 2.2159E-05 17281 20230619_1885_Aki_TMTPro18x_K_F5 103.39 91.242 35027 30032 34831 33955 33239 37379 37244 39824 51509 53271 45695 48906 54086 41910 40944 44130 41407 43917 32397 27526 35371 34033 34789 37603 37768 40855 51475 52980 47527 49559 54276 43605 41909 44299 39631 41705 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70944000 26346 1369 24748 49469;49470 39886 39886 1 9606 Homo sapiens -0.05509183441290588 TCNCETEDYGEK Unmodified 1504.5446 0.54462308 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 1.75 0.829 2 1 1 38.728 38.758 2;3 1.9594E-10 9215 20230619_1881_Aki_TMTPro18x_K_F2 190.35 182.63 70269 33508 72821 85565 90137 165660 77017 102220 144350 87570 126630 233660 194440 227390 99803 127630 301060 399460 64826 31156 74174 82985 92575 159670 80533 108380 142370 93956 134310 229940 192470 229570 114400 144920 286790 376160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 496310000 26347 3776 24749 49471;49472;49473;49474 39887;39888 39888 2 9606 Homo sapiens -0.1874674419193525 TCNISVGR Unmodified 905.4389 0.43889987 42 A0A024QZK4;Q96FC7;Q96FC7-2;B4DG21;Q92561 PHYHIPL;PHYHIP Phytanoyl-CoA hydroxylase-interacting protein-like;Phytanoyl-CoA hydroxylase-interacting protein yes no 0 0 0 7 0.816 1 1 1 35.228 35.266 2 0.0088203 7395 20230619_1887_Aki_TMTPro18x_K_F7 111.95 65.521 145120 71709 168610 130360 67190 73114 125410 148770 130170 154130 219490 240230 195380 184710 178890 106880 230200 203170 134030 66266 167540 126190 79284 79936 123520 146920 135780 157900 220050 237800 199490 188240 184600 114330 219570 192050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 151710000 26348 42 24750 49475;49476;49477 39889;39890 39889 2 9606 Homo sapiens -0.017602026738813947 TCNTNPHLNALSTDSACR Unmodified 2030.8898 0.88982098 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;A0A0C4DG79 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 0 0 6.5 0.5 1 1 37.519 37.59 3 7.427E-31 8546 20230619_1886_Aki_TMTPro18x_K_F6 238.01 230.06 24055 13456 22407 21378 24022 31483 27651 23323 32237 29676 23778 25338 30083 26318 27212 30105 28145 30422 22186 12403 22926 21057 24969 30857 27793 24562 32260 29543 25085 25942 30376 27320 27789 30203 26936 28883 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100650000 26349 1839 24751 49478;49479 39891;39892 39891 2 9606 Homo sapiens -0.08438833395234724 TCNTNPHLNALSTDSACRR Unmodified 2186.9909 0.99093201 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;A0A0C4DG79 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 0 1 1 0 1 34.074 34.074 4 4.9006E-07 7605 20230619_1880_Aki_TMTPro18x_K_F1 102.89 87.259 9341.3 6355.9 9837.7 8564.8 11576 13119 10564 12194 12226 11338 13233 12299 10180 9646.8 9944.6 9712.5 21447 13409 8632.3 5841.2 9970.7 8529.3 11862 12895 10769 12488 12397 11533 13388 12352 10498 10043 10745 9966.9 20354 12726 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12039000 26350 1839 24752 49480 39893 39893 1 9606 Homo sapiens -0.0550838169256167 TCNVRPPNTALDHSR Unmodified 1736.8376 0.83764948 3955 Q8N1H6;Q17RS7 GEN1 Flap endonuclease GEN homolog 1 yes no 0 0 1 8 0 1 32.524 32.524 4 0.0015168 6541 20230619_1888_Aki_TMTPro18x_K_F8 82.865 70.073 22981 13833 22138 21144 23975 25004 24191 25059 33299 25642 24725 26028 28772 21203 23659 19697 29671 21324 21209 12739 22578 20801 24770 24986 24658 25605 33053 25909 25952 26218 28980 21969 24452 19928 28273 20267 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8060300 26351 3955 24753 49481 39894 39894 1 9606 Homo sapiens -0.001295839560270906 TCPFFFPFDTR Unmodified 1433.6438 0.64380726 1635 Q14669;A0A6Q8PGG9;Q14669-3;Q14669-2;A0A6Q8PHK0;A0A994J569;A0A994J4J0;H7C1L9;C9JLD7;A0A994J755;A0A994J4J6;Q14669-4 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 0 0 0 3 0 1 63.927 63.958 2 0.0226 20094 20230619_1882_Aki_TMTPro18x_K_F3 71.349 58.722 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26352 1635 24754 49482 39895 39895 1 9606 Homo sapiens -0.05566888654175273 TCPTCNDFHGLVQK Unmodified 1675.7447 0.7446603 114 F8W1A2;B7Z4L8;B3KTI3;F8VVB6;A0A024R0X1;B7Z625;Q99435-4;Q99435;Q99435-2;Q99435-3 NELL2 Protein kinase C-binding protein NELL2 yes no 0 0 0 8 0 1 45.786 45.824 3 0.00022652 11827 20230619_1888_Aki_TMTPro18x_K_F8 94.122 82.648 16070 17587 14325 18177 11865 13678 10972 12966 13638 19812 22570 23396 20869 23775 20401 23546 23639 23235 14878 16094 14678 18253 12510 14169 11220 13487 14119 19758 22667 23598 21370 24468 20950 23644 22583 22073 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20004000 26353 114 24755 49483 39896 39896 1 9606 Homo sapiens -0.06618224733620082 TCPVQLWVDSTPPPGTR Unmodified 1909.9356 0.93563219 1148 P04637-2;J3KP33;A0A386NC55;A0A386NFX3;A0A386NCX4;B4DNI2;A0A386NC62;H2EHT1;Q1MSW8;A0A386NCB1;A0A386NC25;P04637;A0A386NCW8;P04637-5;P04637-6;P04637-3;A0A0U1RQC9;A0A386NC22;P04637-4;A0A386NDB3;Q2XSC7;K7PPA8;H6U5S3;H6U5S2;E5RMA8;K7PPU4;B6E4X6;A0A386NDA8;A0A386NCU2;A0A386NC20;P04637-8;A0A386NFY2;Q1MSX0;Q5U0E4;H6U5S4;B4E095;E7EQX7;P04637-7;B4DMH2;Q1MSW9;E7ESS1;A0A386NG45;P04637-9;H6U5S5;E7EMR6;E9PFT5;L0ES92;L0ERL2;L0EP82;L0ERI9;Q0ZAK0;Q27HK5;Q0ZAK1;L0EQT1;L0EQ89;L0ERJ3;L0EQJ1;A4GWD0;A4GWB8;A0A0A0U7X4;E2G6R5;A4GWB5;L0EQY4;L0EQS1;A0A0C4L134;L0ERS6;B4XAK8;A0A3Q8QC73;Q761V2;L0ERK8;L0EQX9;L0EP99 TP53;p53 Cellular tumor antigen p53 yes no 0 0 0 1 0 1 58.049 58.049 3 0.00012517 17708 20230619_1880_Aki_TMTPro18x_K_F1 89.468 74.782 24039 22342 25483 23394 24013 26270 27839 26837 27976 25467 28578 26956 29633 29567 27384 28203 27485 28787 22258 20458 25732 23597 25149 26369 27858 27343 28507 25866 29332 27398 30130 30322 27896 28400 26305 27331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44518000 26354 1148 24756 49484 39897 39897 1 9606 Homo sapiens 0.017061798492932212 TCQALAAR Unmodified 889.44399 0.44398525 407 A0A024R6Q2;Q96FX7;Q96B39;H0Y2Q1 C14orf172;TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A yes no 0 0 0 8 0 1 32.823 32.823 2 0.076295 6647 20230619_1888_Aki_TMTPro18x_K_F8 60.436 40.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26355 407 24757 49485 39898 39898 1 9606 Homo sapiens -0.005158988112611951 TCQQTWEK Unmodified 1079.4706 0.47059393 575 A0A024R9I0;P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes no 0 0 0 5.5 0.5 1 1 41.195 41.285 2 0.00066976 10083 20230619_1886_Aki_TMTPro18x_K_F6 158.76 110.19 79498 51482 81480 85191 94436 103350 83340 95533 95294 90575 98774 101370 104870 84429 88786 68731 131760 107700 73429 47442 82811 83450 96770 102900 85105 97964 96565 92127 101450 101770 106080 86906 92804 71575 125490 101970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44050000 26356 575 24758 49486;49487 39899;39900 39900 2 9606 Homo sapiens -0.0659625471059826 TCSDDVVDYFK Unmodified 1347.5653 0.56528217 2309 B2RD09;Q96P11-2;Q96P11;Q96P11-4;Q96P11-5;Q96P11-3 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes no 0 0 0 3 0 1 57.773 57.805 3 0.033784 17538 20230619_1882_Aki_TMTPro18x_K_F3 51.286 37.38 32697 27911 32367 33774 27650 38246 35210 32972 38871 34449 36143 35276 38457 31821 35190 43066 37076 39051 30240 25599 32855 33685 29358 38196 35179 34098 39269 34777 37309 35681 39017 33530 35990 42848 35470 37126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4981000 26357 2309 24759 49488 39901 39901 1 9606 Homo sapiens -0.09459785749959337 TCSNVNWAR Unmodified 1106.4927 0.49272635 3347 O95218-2;O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes no 0 0 0 4.5 3.5 1 1 38.224 38.217 2 6.1331E-05 9297 20230619_1880_Aki_TMTPro18x_K_F1 161.92 143.18 191010 165750 177330 187710 235380 264490 236860 242470 293270 226830 223650 192920 249140 189490 195700 232870 271990 200900 176590 151910 182240 188800 240090 261110 240380 248680 292680 229220 233590 197430 250890 197970 204320 231440 259010 191420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 269690000 26358 3347 24760 49489;49490 39902;39903 39902 2 9606 Homo sapiens -0.05626030242183333 TCTDIKPEWLVK Unmodified 1488.7647 0.76465068 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 1 4.5 3.5 1 1 55.22 55.253 3;4 1.8504E-05 15814 20230619_1888_Aki_TMTPro18x_K_F8 131.26 91.598 523430 504620 546000 562670 488310 605280 576510 563570 600190 775850 695060 674820 812910 648620 618550 850510 765910 828240 484710 462260 552090 564210 514530 607920 577150 584260 614920 769400 713530 688880 816460 680930 641850 849450 731820 786670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 904050000 26359 3246 24761 49491;49492 39904;39905;39906 39905 3 9606 Homo sapiens 0.039818942686224545 TCTFILR Unmodified 909.47422 0.47422274 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 2 0.816 1 1 1 47.829 47.879 2 0.010707 13163 20230619_1882_Aki_TMTPro18x_K_F3 117.62 82.515 631450 558960 545650 590170 597210 620100 590110 623760 664830 586230 573260 476140 620320 547380 562450 745770 690730 578550 583530 511950 562360 594130 616040 625220 597880 635860 669450 591370 593910 491680 629210 572550 581010 736360 658870 551700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1360600000 26360 4005 24762 49493;49494;49495 39907 39907 1 9606 Homo sapiens 0.01586459853933775 TCTIEDVSR Unmodified 1079.4917 0.4917233 4387 Q96PU4;B1AL33;Q96PU4-2 UHRF2 E3 ubiquitin-protein ligase UHRF2 yes no 0 0 0 2.5 0.5 1 1 38.915 38.975 2 0.012603 9144 20230619_1882_Aki_TMTPro18x_K_F3 80.438 50.271 14350 10281 18248 15839 17103 18540 16233 15488 19247 19410 20208 17568 17951 15763 17591 16897 22191 21175 13289 9460.9 18179 15571 17823 18468 16521 16139 19480 19355 20571 17858 18383 16389 18143 17204 21180 20070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39144000 26361 4387 24763 49496;49497 39908 39908 1 9606 Homo sapiens -0.04484289401739261 TCTTVAFTQVNSEDK Unmodified 1699.7723 0.77231483 3722 P62424;Q9BY74;Q5T8U2 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 0 0 0 5 0.707 1 2 1 48.843 48.907 3 1.1927000000000002E-25 13408 20230619_1886_Aki_TMTPro18x_K_F6 236.22 214.97 276670 203480 226320 235350 211970 230530 274730 257100 297890 300010 220850 207120 379290 277620 218010 393820 344810 309690 255280 186650 233950 235110 223080 234160 274000 261950 299450 298170 236930 217180 374290 290390 232470 388620 328440 295160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3763099999.9999995 26362 3722 24764 49498;49499;49500;49501 39909;39910;39911 39911 3 9606 Homo sapiens -0.04958042992416267 TCVADESHAGCEK Unmodified 1462.5817 0.58167729 2776 CON__P02769 yes yes 0 0 0 1.5 0.5 1 1 33.706 33.734 3 5.698E-11 7462 20230619_1880_Aki_TMTPro18x_K_F1 178.67 166.9 + 14173 17857 43148 23207 155350 187450 56762 71599 88179 30324 42008 59272 26803 36117 45593 19314 54201 73387 13371 16371 42996 25039 149980 174320 63886 79854 86139 33947 44747 57992 28861 37137 46364 22778 51909 69060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 469000000 26363 2776 24765 49502;49503 39912;39913 39912 2 9606 Homo sapiens -0.13111027855461543 TCVQEITAHR Unmodified 1213.5874 0.58735502 1887;2547 A0AV58;Q13033-2;Q13033;M0R317;B3KPF6;F5GYK2;B4DMU7;Q59GV6;Q9NRL3;Q9NRL3-3 STRN3;STRN4 Striatin-3;Striatin-4 no no 0 0 0 5.5 0.5 1 1 35.189 35.261 3 1.4409E-07 7647 20230619_1885_Aki_TMTPro18x_K_F5 186.87 144.52 65860 45232 72763 81556 88537 94743 87142 88097 98207 82100 103020 103410 93677 90650 91341 77306 106980 98081 60891 41721 73633 79478 90640 94595 88294 90308 99537 83974 105070 103560 95874 93190 93700 79129 102140 92970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87305000 26364 1887;2547 24766 49504;49505 39914;39915 39914 2 9606 Homo sapiens -0.010895164908561128 TCVVVAEERPR Unmodified 1314.6714 0.671419 4644 Q9P265;Q96IB4;H0Y7Q3;Q86XV3;E7EPU2;A0A0U1RQW6;Q9Y2E4 DIP2B;DIP2C Disco-interacting protein 2 homolog B;Disco-interacting protein 2 homolog C yes no 0 0 1 4.5 0.5 1 1 35.284 35.331 3 2.6987E-12 7656 20230619_1883_Aki_TMTPro18x_K_F4 174.42 141.33 62205 46404 55626 58912 66780 68905 61847 63189 77377 72849 81924 80143 90264 65645 73618 81061 87732 74640 57438 42603 57230 58594 68354 68801 63138 65202 78134 73338 84173 80551 90997 69042 75965 80839 83714 71009 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137320000 26365 4644 24767 49506;49507 39916;39917 39916 2 9606 Homo sapiens 0.026670146060496336 TCWPTDLEEAK Unmodified 1348.5969 0.59691665 2082 A8K5Y7;Q9HAV4;B3KPQ5;B3KNC6;Q9H8N6 XPO5 Exportin-5 yes no 0 0 0 4 0 1 55.072 55.084 2 9.0894E-06 16277 20230619_1883_Aki_TMTPro18x_K_F4 175.93 166.75 37053 35510 38196 40183 30664 39874 37580 37990 34741 47835 36978 36400 45578 32807 44366 44511 36656 34363 34307 32534 38610 40204 32663 40299 37428 39202 35727 47439 38223 37339 46132 34602 44710 43979 35131 32754 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27313000 26366 2082 24768 49508 39918 39918 1 9606 Homo sapiens -0.06343792995971853 TCYAANPRPDALMK Unmodified 1606.7596 0.75958208 2032 D6RBJ1;A8K3X7;P61371;Q96A47 ISL1;ISL2 Insulin gene enhancer protein ISL-1;Insulin gene enhancer protein ISL-2 yes no 0 0 1 2 0 1 45.195 45.276 3 0.0085697 12239 20230619_1881_Aki_TMTPro18x_K_F2 63.09 40.485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26367 2032 24769 49509 39919 39919 1 9606 Homo sapiens -0.019527328656522513 TCYIAPER Unmodified 1008.4699 0.46986564 1893 B2RAJ6;A0JP11;Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 yes no 0 0 0 4.5 0.5 1 1 38.312 38.38 2 0.028357 8872 20230619_1885_Aki_TMTPro18x_K_F5 81.548 72.334 54497 40331 47710 61186 60984 66071 63852 67435 76982 63013 76461 70875 71907 62328 59594 75550 81875 72315 50310 37103 49315 60100 62393 66445 64614 68674 77596 64180 78216 71359 72979 65257 62130 75484 78056 68754 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34101000 26368 1893 24770 49510;49511 39920;39921 39921 2 9606 Homo sapiens -0.03403049359644683 TDAAVEMK Oxidation (M) 879.40078 0.40078303 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;B3KSQ7 DBN1 Drebrin yes no 0 1 0 2.33 0.471 2 1 36.923 36.98 2 0.028324 8367 20230619_1882_Aki_TMTPro18x_K_F3 73.665 14.85 42352 23411 53769 47939 67432 76182 51580 69671 50801 45222 71098 87953 59830 64504 69491 26200 75459 75534 39170 21660 53835 46734 68511 74675 52992 70912 52566 48286 71638 86427 61959 65265 70574 29862 72141 71220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38759000 26369 1396 24771 49512;49513;49514 39922;39923 39923 871 2 9606 Homo sapiens -0.04374133379201339 TDAAVEMK Unmodified 863.40587 0.4058684 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;B3KSQ7 DBN1 Drebrin yes no 0 0 0 3.5 0.5 1 1 42.498 42.553 2 0.0049663 10643 20230619_1883_Aki_TMTPro18x_K_F4 114.89 16.502 149490 84015 196570 183160 233750 270330 193020 235480 213840 197110 274020 316660 268360 259840 264760 111080 317630 299740 138320 77807 196240 177790 238760 265690 197870 241810 218980 204890 278380 313650 274100 262110 271300 125140 303270 282760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113200000 26370 1396 24771 49515;49516 39924;39925 39925 2 9606 Homo sapiens -0.03129829516592508 TDAAVSFAK Acetyl (Protein N-term) 950.47091 0.4709115 3388 P05141 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 1 0 0 3 0.816 1 1 1 53.492 53.525 2 6.6868E-06 15693 20230619_1882_Aki_TMTPro18x_K_F3 73.931 60.423 684220 566700 598490 679070 694540 808680 799870 760880 938220 757380 769360 814880 943410 752730 753150 911280 931120 865410 632070 519760 617190 678220 717310 806710 804280 780590 940910 767830 805120 822700 948200 787020 779840 910220 888710 822690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3047499999.9999995 26371 3388 24772 49517;49518;49519 39926;39927 39926 2 9606 Homo sapiens -0.006305117191004683 TDACFIR Unmodified 881.40654 0.40653711 1235 C9JX88;A0A140VK70;P35998;Q75L23;P35998-2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 4.5 0.5 1 1 41.625 41.689 2 7.6955E-05 10231 20230619_1885_Aki_TMTPro18x_K_F5 143.37 94.864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26372 1235 24773 49520;49521 39928;39929 39929 2 9606 Homo sapiens -0.038909900768885564 TDAETLPALK Unmodified 1057.5655 0.56554017 3250 O43252;Q05BW9 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 4.6 0.49 2 3 50.84 50.893 2;3 0.00025875 14180 20230619_1885_Aki_TMTPro18x_K_F5 130.96 87.26 200610 174970 190250 203240 243070 262790 228790 233520 293940 275570 265140 245150 293070 244590 264540 315910 289510 260430 185500 160400 195000 203720 248000 260590 233500 241620 294710 275440 274460 250400 296870 256060 271160 313080 276560 248050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 524370000 26373 3250 24774 49522;49523;49524;49525;49526 39930;39931;39932 39932 3 9606 Homo sapiens 0.039060020322040145 TDAISEEK Unmodified 891.41854 0.41854158 4052 Q5SQT9;Q9NR31;Q8NG23;Q6FID4;Q9NR31-2;H0Y5E8 SAR1A;SARA1 GTP-binding protein SAR1a yes no 0 0 0 2 0 1 40.152 40.222 2 0.0071477 9907 20230619_1881_Aki_TMTPro18x_K_F2 99.802 43.791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26374 4052 24775 49527 39933 39933 1 9606 Homo sapiens -0.03151094852717051 TDAPLNIR Unmodified 898.48723 0.48723027 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q8N9Z3;Q5CAQ4;I3L0K7;I3L239 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 0 6 0 1 41.65 41.744 2 0.001916 10249 20230619_1886_Aki_TMTPro18x_K_F6 125.5 83.852 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26375 1211 24776 49528 39934 39934 1 9606 Homo sapiens 0.0339261423764583 TDASSASSFLDSDELER Unmodified 1828.7963 0.79628098 1482 Q14498;Q14498-2;B4E1M7;A0A384NQ03;Q68DD9;B3KWX7;B4DLM0;Q6N037;B4DRA0;E1P5S2;Q6MZY7;B7Z4L7;Q14498-3;H0Y4X3;G3XAC6;A0A0U1RQH7;A0A0U1RQW2 RBM39;DKFZp781C0423;DKFZp686A11192;RNPC2;DKFZp686C17209 RNA-binding protein 39 yes no 0 0 0 1.5 0.5 2 2 54.48 54.492 2;3 1.2743E-23 16398 20230619_1881_Aki_TMTPro18x_K_F2 257.8 242.26 115430 90908 93623 114000 101900 114750 118410 103310 135080 132100 123310 128270 125110 122080 125330 145100 139020 137340 106540 83432 97177 113200 105720 115720 118900 107170 136230 131890 127210 130170 127770 127270 128310 144960 132870 130540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1041099999.9999999 26376 1482 24777 49529;49530;49531;49532 39935;39936 39936 2 9606 Homo sapiens -0.08496531025048171 TDAVDSVVR Unmodified 960.48762 0.4876242 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 2.5 0.5 1 1 40.916 40.975 2 3.7945E-05 9996 20230619_1882_Aki_TMTPro18x_K_F3 165.72 130.23 126250 84998 102890 128540 120350 140870 131860 125520 168580 155990 167530 168250 177760 152860 144280 170470 198270 168300 116430 78223 106900 126290 124120 141100 133380 130150 169590 156460 172350 169720 179580 159100 150410 170840 188980 159990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164080000 26377 1229 24778 49533;49534 39937;39938 39938 2 9606 Homo sapiens 0.005799891668630153 TDDCHPWVLPVVK Unmodified 1564.7708 0.77079869 1234 Q2TU84;A0A140VK69;P17174;P17174-2 GIG18;GOT1 Aspartate aminotransferase;Aspartate aminotransferase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 56.078 56.144 3 2.8486E-06 16208 20230619_1887_Aki_TMTPro18x_K_F7 113.65 93.542 183180 153950 164630 177590 144620 151830 178700 173090 173570 216040 210750 203890 224840 196540 204240 229270 224560 232490 169270 141140 168550 177140 152650 156050 178120 176560 178800 215570 215070 207310 228080 204720 209310 229990 214720 220760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 229580000 26378 1234 24779 49535;49536 39939 39939 1 9606 Homo sapiens 0.011004125001136345 TDDEVVQR Unmodified 960.45124 0.45123869 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0TAY2;Q59FC6;A0A7P0TBC2;Q96GW1;A0A7P0T885;A0A7P0T8R3;A0A7P0Z405;B4DQX3;A0A7P0TAG4;A0A7P0Z4B4;A0A7P0T8C8;A0A7P0TAC2 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 1 0 1 32.439 32.439 2 0.010772 6964 20230619_1880_Aki_TMTPro18x_K_F1 97.798 52.486 8527 4545.1 9412.5 11625 15885 17054 13731 13653 15928 12968 17859 20652 13432 17661 18046 7504.4 19549 19577 7874.3 4223.4 9600.1 11208 15925 16741 14033 14166 16162 13385 18066 20483 14111 17764 18292 8418.8 18690 18467 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15231000 26379 3452 24780 49537 39940 39940 1 9606 Homo sapiens -0.030568877298492225 TDDEVVQREEEAIQLDGLNASQIR Unmodified 2727.3311 0.33113014 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0TAY2;Q59FC6;A0A7P0TBC2;Q96GW1;A0A7P0T885;A0A7P0T8R3;A0A7P0Z405;B4DQX3 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 1 1.5 0.5 1 1 59.029 59.029 3 5.0405E-120 18083 20230619_1880_Aki_TMTPro18x_K_F1 375.38 357.09 144520 111610 117210 140320 123200 155680 153800 161460 187680 160120 178630 189040 183010 167100 182810 191750 188710 205950 133380 102440 121610 139540 128590 156330 154330 164490 188800 162820 183990 189870 186710 174340 186280 193070 180620 195400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5207400000 26380 3452 24781 49538;49539 39941;39942 39941 2 9606 Homo sapiens 0.03655782203486524 TDDYLDQPCLETVNR Unmodified 1837.8152 0.81524228 1080 A0A0S2Z3X8;P31150;B4DHX4 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 2 0.816 1 1 1 51.947 51.982 2 1.2687E-18 15291 20230619_1881_Aki_TMTPro18x_K_F2 273.23 259 160290 131940 154800 180690 103790 125300 135460 126820 146870 187930 195860 199220 200070 188790 185050 198440 196410 223080 148180 121180 157080 177690 112790 130930 135230 131250 151070 186940 198860 201320 203440 195550 189150 200620 188000 211520 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 304110000 26381 1080 24782 49540;49541;49542 39943;39944;39945 39944 3 9606 Homo sapiens -0.07015272934972927 TDDYLDQPCYETINR Unmodified 1901.8102 0.8101569 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q5SX87;Q5SX91 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 0 2 0.816 2 2 2 50.861 50.901 2;3 3.1016E-18 14824 20230619_1881_Aki_TMTPro18x_K_F2 238.13 230.59 550530 494250 568230 580930 586530 666550 690090 612950 625770 692960 715820 582300 668300 508910 676010 678160 617680 607690 509510 453090 576220 580780 610320 666340 687790 632160 645000 692530 727390 594160 683360 536630 684090 674860 591480 577970 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1824299999.9999998 26382 2533 24783 49543;49544;49545;49546;49547;49548 39946;39947;39948;39949 39947 4 9606 Homo sapiens -0.10467576797577749 TDEEGDFR Unmodified 967.3883 0.38830408 4461 Q9BX67;Q9BX67-2 JAM3 Junctional adhesion molecule C yes no 0 0 0 1 0 1 35.419 35.419 2 5.974E-05 8127 20230619_1880_Aki_TMTPro18x_K_F1 186.09 88.616 84555 50845 84794 66263 111470 123670 77403 84762 109440 94946 134230 123960 130230 119650 111370 67579 154830 121480 78058 46739 86383 66401 112830 119790 81079 89491 110610 96384 136270 124310 132220 120840 115710 71939 147490 114930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173510000 26383 4461 24784 49549 39950 39950 1 9606 Homo sapiens -0.09669453517892634 TDEFQLHTNVNDGTEFGGSIYQK Unmodified 2599.1827 0.18267499 1286 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 0 5.22 1.31 1 2 2 2 2 55.915 55.966 3;4 1.0244999999999999E-43 16237 20230619_1885_Aki_TMTPro18x_K_F5 223.89 208.64 224920 212240 253410 261410 248230 289650 306950 311450 339840 289910 306180 287500 346880 295210 291510 315590 290320 282130 208400 194620 255090 260390 259850 291200 307100 316040 342860 294170 317360 292390 350080 305300 297470 314940 277730 268350 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1597999999.9999998 26384 1286 24785 49550;49551;49552;49553;49554;49555;49556;49557;49558 39951;39952;39953;39954;39955;39956;39957 39955 7 9606 Homo sapiens -0.05294903979574883 TDEGHPFK Unmodified 929.4243 0.42429566 2026 Q6IAX4;A8K3B9;Q16799-3;B7Z4K5;A8MT72;Q2NKQ5;Q16799-2;Q16799 RTN1 Reticulon;Reticulon-1 yes no 0 0 0 3.5 0.5 2 2 35.337 35.39 3 0.0022526 7991 20230619_1882_Aki_TMTPro18x_K_F3 97.431 6.7739 643900 352910 697270 823750 768370 763480 727230 800180 785350 712610 1077800 1296900 877960 894060 930480 517360 1294500 1314200 594580 327280 705540 791430 790550 776790 738090 813010 807550 742290 1084900 1274600 906090 915750 962930 571920 1235200 1239700 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 772170000 26385 2026 24786 49559;49560;49561;49562 39958;39959;39960;39961 39959 4 9606 Homo sapiens -0.0432395155037284 TDEGIAYR Unmodified 923.43486 0.43486035 3538 V9HW12;P32119;B4DF70 HEL-S-2a;PRDX2 Peroxiredoxin-2 yes no 0 0 0 2.5 1.12 1 1 1 1 36.979 37.019 2 0.00029552 8454 20230619_1881_Aki_TMTPro18x_K_F2 167.24 131.05 668670 433830 617960 635540 809550 828380 679070 768560 827210 611860 825570 813410 693730 728470 800500 589140 914550 802220 617110 399160 634790 627570 822080 821510 697140 784820 833350 633290 841460 813710 718340 746410 817160 607030 873150 760100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5078400000 26386 3538 24787 49563;49564;49565;49566 39962;39963;39964 39963 3 9606 Homo sapiens -0.029919688959580526 TDELPAAAPADSAR Unmodified 1383.663 0.66302238 1549 A0A494C0R8;I3L2B0 CLUH yes no 0 0 0 1.5 0.5 1 1 41.331 41.369 2 4.3697E-11 10477 20230619_1881_Aki_TMTPro18x_K_F2 173.04 135.31 37780 29448 33802 35720 34770 27452 32903 34887 42170 44499 47352 36030 45952 33942 38446 39735 40534 33554 34894 27018 34674 35465 35928 28598 33592 35382 42658 44191 48188 36919 46543 35411 39346 39495 38715 31960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44162000 26387 1549 24788 49567;49568 39965 39965 1 9606 Homo sapiens -0.01346260829586754 TDEMLHTDQR Oxidation (M) 1260.5405 0.54046441 1061 A0A0S2Q0B1;O14497;H0Y488;A0A1B0GTU5;O14497-3;Q96TA9;Q4LE49 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A yes no 0 1 0 1 0 1 28.531 28.531 3 0.00025521 5385 20230619_1880_Aki_TMTPro18x_K_F1 111.27 82.938 11550 7375 9114.5 10490 14033 12774 11673 12687 12763 10226 13356 11703 14115 13237 11545 14183 16889 13304 10647 6784 9539.7 10364 14109 12745 11942 12897 12957 10519 13695 11884 14273 13646 12093 14182 16083 12658 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15394000 26388 1061 24789 49569 39966 39966 625 1 9606 Homo sapiens -0.07938420832647353 TDEQALLSSILAK Unmodified 1387.7559 0.75586013 2962 H0YFI1;F5H479;F5GX19;F5H3Y3;Q6IAA8 LAMTOR1 Ragulator complex protein LAMTOR1 yes no 0 0 0 6.5 0.5 1 1 63.499 63.54 3 0.0015281 19429 20230619_1887_Aki_TMTPro18x_K_F7 78.401 58.823 57850 57534 78058 79992 73784 92588 80323 88971 89329 62367 77968 89564 94640 51657 82174 104580 83711 84682 53719 52818 77577 79086 77188 92525 80931 90426 89950 65284 81341 88483 95277 57403 83990 103050 80086 80639 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 718700000 26389 2962 24790 49570;49571 39967 39967 1 9606 Homo sapiens 0.07749243903822389 TDEREFFLASYNR Unmodified 1646.7689 0.76888444 4256 Q8NG68 TTL Tubulin--tyrosine ligase yes yes 0 0 1 5 0 1 50.504 50.58 3 0.025759 14029 20230619_1885_Aki_TMTPro18x_K_F5 61.167 37.792 61288 49587 57599 68920 56113 65221 66909 68134 75018 77880 77706 82597 90765 75622 75644 94111 90499 92685 56639 45555 58871 67941 58729 66278 67100 69678 76108 78322 80198 83409 91504 79218 78108 94141 86460 88039 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20051000 26390 4256 24791 49572 39968 39968 1 9606 Homo sapiens -0.028629249840832927 TDFEMVHLR Unmodified 1146.5492 0.5491786 2723 B9A6J2;Q15042;Q15042-3;D3DP75;A0A8J9AUI2;Q15042-4;A0A8I5KRH8 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes no 0 0 0 5 0 1 47.336 47.413 3 0.00083143 12660 20230619_1885_Aki_TMTPro18x_K_F5 87.806 51.411 36714 27083 29527 34176 36179 42885 33639 33774 47588 32599 39109 40859 42182 35952 31151 42648 40965 44620 33872 24864 30721 34031 37055 42485 34488 35107 47304 33303 40652 40953 42442 37598 32477 42825 39125 42346 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9575200 26391 2723 24792 49573 39969 39969 1 9606 Homo sapiens -0.018234024055118425 TDFFIGGEEGMAEK Oxidation (M) 1545.6657 0.6657245 4703 Q9Y266;A0A0A0MSU9 NUDC Nuclear migration protein nudC yes no 0 1 0 2.5 0.5 1 1 55.983 56.01 3 1.7335E-08 16769 20230619_1882_Aki_TMTPro18x_K_F3 145.52 132.38 154780 124890 134920 160970 135130 157520 145590 144910 175130 200130 189520 182700 199630 175620 156430 225130 200260 218560 142950 114640 138870 159500 140790 159240 147150 150420 177480 198760 194110 186070 201450 184010 162640 224860 191310 207590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220280000 26392 4703 24793 49574;49575 39970;39971 39971 2870 2 9606 Homo sapiens -0.08528173486934065 TDFFIGGEEGMAEK Unmodified 1529.6708 0.67080988 4703 Q9Y266;A0A0A0MSU9 NUDC Nuclear migration protein nudC yes no 0 0 0 3 0 1 59.808 59.837 2 0.03162 18381 20230619_1882_Aki_TMTPro18x_K_F3 66.595 46.834 7511 6031.2 9447.8 8107.7 4866.2 9226.7 9241.9 7073.4 12883 12711 9532 14828 11895 13615 12229 14266 11172 14972 6959.3 5538.9 9365.3 8032.2 5565.3 9185.9 9173 7533.6 12791 12616 10080 14891 12106 14102 12384 14361 10726 14199 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14069000 26393 4703 24793 49576 39972 39972 1 9606 Homo sapiens -0.07283869624325234 TDFKEEPEPGFK Unmodified 1422.6667 0.66671078 2024;1277 A0A1B0GVU9;Q9H3A5;Q9BUZ3;B4DDN1;Q96AW5;H7C0R3;A0A0U1RQX5;A0A0U1RRC8;Q53HS0;A8K3A8;P47897-2;P47897;B4DNN3 QARS Glutamine--tRNA ligase no no 0 0 1 5 0 1 48.353 48.429 3 0.029913 13106 20230619_1885_Aki_TMTPro18x_K_F5 58.21 41.331 61091 44686 55672 53740 59869 54955 61116 63100 54555 83509 88910 82454 90635 70271 74476 94372 91502 83743 56410 41006 57039 53575 61785 55706 61399 64427 57438 83192 89624 83376 91628 74180 77064 93796 87331 79680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108070000 26394 1277;2024 24794 49577 39973 39973 1 9606 Homo sapiens -0.027715910557162715 TDFTPHWK Unmodified 1030.4872 0.48723027 1158 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A0U1RR30 GATAD2B Transcriptional repressor p66-beta yes no 0 0 0 8 0 1 47.769 47.827 3 0.013758 12586 20230619_1888_Aki_TMTPro18x_K_F8 71.223 41.876 85526 83284 80605 88861 85712 95970 106130 88677 111500 106800 98692 86661 94142 87347 92497 102350 99464 97152 79140 76261 82437 89402 89177 96377 105930 91623 112780 106390 101600 88940 96210 90856 94526 102300 95083 92339 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66051000 26395 1158 24795 49578 39974 39974 1 9606 Homo sapiens -0.026793857623488293 TDGAAPNVAPSDVGGGGGR Unmodified 1653.7707 0.77067535 120 A0A024R104;Q12860-2;Q12860 CNTN1 Contactin-1 yes no 0 0 0 3 0 1 39.217 39.271 2 3.5828999999999997E-19 9303 20230619_1882_Aki_TMTPro18x_K_F3 237.48 204.64 13696 12003 11483 11204 3650.3 2448.5 4954.1 5180.8 5799.5 12559 19942 18376 15534 13601 14371 14813 18818 21000 12653 10983 11720 11282 4442.7 3223.6 4975 5318.7 6427.6 12456 19586 18232 15937 14255 14883 15210 17977 19873 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36515000 26396 120 24796 49579 39975 39975 1 9606 Homo sapiens -0.03005915966195971 TDGCHAYLSK Unmodified 1150.5077 0.50770771 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;B4DNY3;B4DNA3;B4DUZ8 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 0 0 6 0.816 1 1 1 38.227 38.304 3 0.0012217 8819 20230619_1886_Aki_TMTPro18x_K_F6 79.659 66.863 450630 308920 404130 432030 487320 504810 497630 493780 592450 566810 628920 570650 625940 551570 514120 557660 725560 620430 415910 284010 415800 427040 499840 504670 504070 507090 599590 569180 642870 578600 633930 569970 536600 563750 691440 589010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 701180000 26397 2327 24797 49580;49581;49582 39976;39977 39976 2 9606 Homo sapiens -0.06152583164839598 TDGEGEDPECLGEGK Unmodified 1591.6308 0.63079556 2715 B7ZMD6;Q8WZA9 IRGQ Immunity-related GTPase family Q protein yes no 0 0 0 1 0 1 44.601 44.601 3 3.3224E-12 12133 20230619_1880_Aki_TMTPro18x_K_F1 140.1 134.26 52659 43067 48721 47897 56955 59590 59305 60447 78952 53205 53577 47349 55350 47255 51810 63119 64400 57032 48662 39474 49938 48154 58586 59406 60244 61478 78235 54038 56197 48391 56298 49585 53501 62799 61445 54261 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97507000 26398 2715 24798 49583 39978 39978 1 9606 Homo sapiens -0.14135461085538736 TDGEPGPQGWSPR Unmodified 1382.6215 0.62149192 4523 Q9H773 DCTPP1 dCTP pyrophosphatase 1 yes yes 0 0 0 3.5 0.5 1 1 42.794 42.849 2 1.3777E-15 10804 20230619_1882_Aki_TMTPro18x_K_F3 213.58 181.37 219750 193220 199060 192900 158760 191970 192170 186090 209230 250150 257600 253300 295020 247370 232390 269300 294410 271870 203140 176890 203290 194990 169190 194160 192480 192270 214310 249440 263580 256800 296930 256560 241010 270340 280930 258280 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 375770000 26399 4523 24799 49584;49585 39979;39980;39981 39979 3 9606 Homo sapiens -0.05451396798230235 TDGFAEAIHSPQVAGVPR Unmodified 1850.9275 0.92751034 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 6 0 1 49.293 49.371 3 2.5880000000000002E-30 13599 20230619_1886_Aki_TMTPro18x_K_F6 225.75 200.21 53845 45774 49459 52996 50148 53756 54325 55369 68546 55063 47722 56184 64739 49717 55475 66637 67887 65368 49768 41965 50635 52952 52167 54352 54967 56449 68196 55723 50747 56761 65083 52418 57317 66585 64816 62110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192710000 26400 3440 24800 49586 39982 39982 1 9606 Homo sapiens 0.03608368924142269 TDGFGIDTCR Unmodified 1140.487 0.48697227 1009 A0A0C4DGQ5;P04632;K7EM73;K7EKD8;K7ELJ7;U3KQE2;K7EIV0;A0A075B7C0;U3KPR7 CAPNS1 Calpain small subunit 1 yes no 0 0 0 3.5 0.5 1 1 45.232 45.292 2 7.447E-07 11859 20230619_1883_Aki_TMTPro18x_K_F4 183.43 159.21 524840 436210 475490 523100 555630 605170 620900 636200 698560 691060 773320 773740 809210 716520 692350 860930 931240 906480 484980 400070 488680 522300 572620 606470 624670 649130 710220 697980 791400 780130 819620 748550 720180 864860 888530 860590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 426070000 26401 1009 24801 49587;49588 39983;39984;39985 39985 3 9606 Homo sapiens -0.07765173544498793 TDGTVEIYNLSANYFQEK Unmodified 2090.9797 0.97966507 4317 Q969X6;H3BSH7;Q969X6-2;Q969X6-3;H3BPD7;I3L4T9 CIRH1A Cirhin yes no 0 0 0 6 0 1 62.722 62.773 3 1.8738999999999998E-19 19373 20230619_1886_Aki_TMTPro18x_K_F6 191.44 171.6 48527 41291 44272 53256 45625 52325 53506 46187 58180 54698 55439 52051 60862 52107 53429 71557 57812 64628 44850 37895 45407 52768 47519 52838 53619 47874 58898 54768 57224 53014 61599 54769 54808 71150 55319 61433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140340000 26402 4317 24802 49589 39986 39986 1 9606 Homo sapiens -0.022185572433500056 TDHGAEIVYK Unmodified 1131.556 0.55603811 597 P10636-3;A0A024RA19;A0A0G2JMX7;A0A0G2JS76;A0A024R9Y1;A0A0G2JPD5;A0A0G2JQJ7;A0A7I2PLE3;A0A024RA17;A0A7P0T936;A0A024R9Y0;I3L170;B3KTM0;A0A7I2PJZ2;P10636-5;P10636-7;P10636-6;P10636-8;P10636-4;P10636-2;P10636;P10636-9;B4DSB3;B4DSE3 MAPT Microtubule-associated protein tau;Microtubule-associated protein yes no 0 0 0 4 0 1 39.966 40.008 3 0.0029995 9555 20230619_1883_Aki_TMTPro18x_K_F4 77.288 51.629 78619 38661 62563 71436 63353 60369 68048 61497 85980 64368 80027 88885 91553 80339 63254 107020 95972 114350 72393 35736 64935 69249 65863 61892 68884 62894 86258 65697 82912 88892 91785 84546 66874 107380 91636 108460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47093000 26403 597 24803 49590 39987 39987 1 9606 Homo sapiens -0.0044776625329632225 TDHPEIGEGKPTPALSEEASSSSIR Unmodified 2594.246 0.24600353 3954 Q16891-2;Q16891;B4DKR1;B4DS66;Q05DN3 IMMT MICOS complex subunit MIC60 yes no 0 0 1 4 0.816 1 1 1 43.873 43.937 4 3.0816E-08 11360 20230619_1882_Aki_TMTPro18x_K_F3 104.33 93.642 57638 28379 51840 70815 61130 53642 56447 61886 86215 75911 90317 82851 91801 82581 62620 92796 81501 85794 53120 26369 53373 67703 62598 55702 58121 63050 86269 76211 92426 83841 92295 85696 65403 92615 77827 81546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 344230000 26404 3954 24804 49591;49592;49593 39988 39988 1 9606 Homo sapiens 0.012650367376409122 TDIQIALPSGCYGR Unmodified 1549.7559 0.75587691 3541 P33316-2;H0YNW5;P33316;H0YKC5;H0YNJ9;H0YMM5;A0A0C4DGL3;H0YKI0;H0YMP1 DUT Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial yes no 0 0 0 5.33 3.09 1 1 1 55.201 55.244 2;3 2.5975E-11 15787 20230619_1888_Aki_TMTPro18x_K_F8 181.66 165.03 373810 306900 353000 373990 285110 364900 329660 355440 360010 456150 407710 381080 475320 383540 364740 506700 423490 457750 345500 281540 359440 372100 303180 369400 331060 366410 367530 453180 418750 390530 477580 402190 376880 504030 404860 435160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2434400000 26405 3541 24805 49594;49595;49596 39989;39990 39990 2 9606 Homo sapiens 0.0029892063212173525 TDISTALK Unmodified 847.4651 0.46509784 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 0 6.5 0.5 1 1 47.444 47.532 2 0.00016944 12411 20230619_1887_Aki_TMTPro18x_K_F7 170.66 42.099 628380 522520 559960 535920 381580 426690 314430 295930 420880 668900 1032100 1135800 685210 850390 930640 752960 1136200 1060600 580580 478550 571380 538990 409190 437280 325320 322080 447090 669820 1015900 1121300 723800 880260 952340 776140 1084600 1004400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 378260000 26406 1958 24806 49597;49598 39991;39992 39992 2 9606 Homo sapiens 0.03526389769228899 TDITYPAGFMDVISIDK Unmodified 1884.9179 0.91791644 2202 Q96IR1;B2R491;P62701;Q53HV1 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform yes no 0 0 0 6 1.41 1 1 1 1 1 64.349 64.379 3 0.00031273 19922 20230619_1885_Aki_TMTPro18x_K_F5 77.746 65.77 56809 34955 40344 41038 46242 25926 57991 61232 69238 50685 70159 57897 60322 42562 70401 68354 48469 63066 52322 32094 42423 40806 47731 28244 58127 59821 69820 51988 71445 58034 62264 45798 70200 67981 46688 59903 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3868999999.9999995 26407 2202 24807 49599;49600;49601;49602;49603 39993;39994 39993 2 9606 Homo sapiens 0.01085419803757759 TDITYPAGFMDVISIDK Oxidation (M) 1900.9128 0.91283106 2202 Q96IR1;B2R491;P62701;Q53HV1 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform yes no 0 1 0 6 0.816 1 1 1 62.724 62.769 3 5.3758E-07 19341 20230619_1886_Aki_TMTPro18x_K_F6 117.4 105.42 534390 425440 478430 577050 507050 531140 578200 569980 605800 663510 639150 598690 668920 564210 609210 691640 637120 721720 493630 390760 491680 569550 526150 541490 579760 582210 617340 663430 655260 609720 678860 590070 622570 694420 609910 684860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 949830000 26408 2202 24807 49604;49605;49606 39995;39996 39995 1374 2 9606 Homo sapiens -0.0015888405885107204 TDLEELSLGPR Unmodified 1228.6299 0.62993134 889 B4DXH2;B4DUZ3;A0A087X1E4;P53365-2;P53365-3;P53365 ARFIP2 Arfaptin-2 yes no 0 0 0 2.5 0.5 1 1 54.286 54.321 2 4.3963E-12 16317 20230619_1881_Aki_TMTPro18x_K_F2 207.83 162.11 34408 26393 27077 28544 28521 30627 32533 31150 36203 35338 35058 35291 38595 30445 35106 39483 35774 33845 31748 24191 28146 28691 29632 30838 32680 31901 36636 35488 36182 35670 39095 32045 35820 39207 34208 32213 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32056000 26409 889 24808 49607;49608 39997 39997 1 9606 Homo sapiens 0.024761571183944397 TDLETSPGAAPR Unmodified 1213.5939 0.59388018 1798 Q86XL4;A0A8Q3WKY0;A0A8Q3SIB7;A0A8Q3SII9;Q6F5E8-2;Q6F5E8 RLTPR Leucine-rich repeat-containing protein 16C yes no 0 0 0 2 0 1 37.7 37.762 2 1.4821E-07 8795 20230619_1881_Aki_TMTPro18x_K_F2 172.88 137.52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26410 1798 24809 49609 39998 39998 1 9606 Homo sapiens -0.004373000584791953 TDLLLEPYNK Unmodified 1204.634 0.63395408 148 P35579;A0A8I5KWT8;A0A024R1N1;P35579-2;Q86XU5;B4E3S1 MYH9 Myosin-9 yes no 0 0 0 5.5 0.5 1 1 57.937 57.999 3 0.00014527 17255 20230619_1886_Aki_TMTPro18x_K_F6 121.73 77.415 155850 134080 153970 147410 145810 173730 178230 185660 209110 214060 194450 188870 224320 172110 189920 233340 209060 203630 144140 122860 156440 148220 153100 173960 178800 189510 210810 214020 201450 192370 226250 181390 195020 231710 199800 193750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 346310000 26411 148 24810 49610;49611 39999;40000 40000 2 9606 Homo sapiens 0.039822466120767785 TDLNPDNLQGGDDLDPNYVLSSR Unmodified 2517.1619 0.16193955 3441 V9HWH2;P12277;V9HW77;G3V4N7;G3V461 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 0 3 0.816 1 1 1 60.796 60.81 2;3 6.8047E-44 18740 20230619_1882_Aki_TMTPro18x_K_F3 224.08 217.42 101120 78878 78221 98831 55119 67189 76751 85588 94994 121850 134360 143390 149100 143470 113290 158970 158310 167610 93301 72394 81137 97756 59801 70769 76781 87170 97394 121810 136660 144600 150140 148730 118570 159850 151100 159070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 828380000 26412 3441 24811 49612;49613;49614 40001;40002;40003 40002 3 9606 Homo sapiens -0.03595494359296936 TDLVPAFQNLMK Oxidation (M) 1391.7119 0.71188683 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6;A0A994J6A3 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 1 0 2 0 1 60.434 60.445 3 0.023867 18843 20230619_1881_Aki_TMTPro18x_K_F2 51.569 35.907 65084 62314 63211 72625 64219 68051 74239 71605 76690 77798 75442 73328 77027 77801 80117 91268 78723 89088 60231 57109 64441 72447 66862 69268 74351 73093 77965 78164 77544 74832 78795 80768 81405 91349 75406 84601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124200000 26413 1860 24812 49615 40004 40004 1188 1 9606 Homo sapiens 0.03169936205790691 TDLVPAFQNLMK Unmodified 1375.717 0.71697221 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6;A0A994J6A3 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 2.5 0.5 1 1 63.042 63.062 3 1.0494E-06 20008 20230619_1881_Aki_TMTPro18x_K_F2 145.23 112 446700 362920 414730 433720 331940 454620 435120 428960 485380 510840 467530 466200 524160 460180 504780 527660 551370 573620 412790 332870 422930 432530 354910 457370 434420 442220 491190 510560 483090 475070 532400 478560 516330 531680 527250 544260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 299190000 26414 1860 24812 49616;49617 40005;40006 40006 2 9606 Homo sapiens 0.044142400684222594 TDMDNQIVVSDYAQMDR 2 Oxidation (M) 2031.8514 0.85136979 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 2 0 1.5 0.5 1 1 46.635 46.675 3 0.00010522 12976 20230619_1880_Aki_TMTPro18x_K_F1 88.283 76.669 49188 32499 45934 52805 54650 57205 52293 52437 54285 54639 66537 59227 62380 48235 50101 66541 62096 62568 45404 29939 47099 51677 55990 57383 52943 53967 55674 55235 67442 59603 63183 51099 51917 66299 59300 59468 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 347720000 26415 3622 24813 49618;49619 40007;40008 40007 2312;2313 2 9606 Homo sapiens -0.12328183820409322 TDMDNQIVVSDYAQMDR Oxidation (M) 2015.8565 0.85645517 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 1 0 1.8 0.748 2 2 1 50.522 50.558 2;3 0.00080573 14710 20230619_1881_Aki_TMTPro18x_K_F2 78.615 65.478 58673 53981 49137 56539 58413 59906 58637 51814 66898 64376 71302 56653 57939 56231 57699 72555 70774 67621 54223 49430 50886 56944 59942 60181 59352 53853 67844 64180 72263 57922 59607 58852 59483 72328 67568 64290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 426180000 26416 3622 24813 49620;49621;49622;49623;49624 40009;40010 40009 2312;2313 2 9606 Homo sapiens -0.11083879957800491 TDMDNQIVVSDYAQMDR Unmodified 1999.8615 0.86154055 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 2.75 0.829 2 1 1 54.886 54.913 2;3 9.5931E-30 16544 20230619_1881_Aki_TMTPro18x_K_F2 278.97 248.1 111250 105060 111920 106840 116840 117940 123250 132460 118280 129120 124610 112230 133460 114630 127090 139330 133260 132280 102970 96170 113670 108010 121010 118830 123810 134160 121130 130110 127880 114860 135630 119480 129750 139200 127440 125710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 363390000 26417 3622 24813 49625;49626;49627;49628 40011;40012;40013 40011 3 9606 Homo sapiens -0.0983957609519166 TDMLGHVR Unmodified 927.45964 0.45963531 2240 B4DXX1;B2R713;Q7Z2T5;Q7Z2T5-2 TRMT1L TRMT1-like protein yes no 0 0 0 6.5 0.5 1 1 37.041 37.108 3 0.035882 8120 20230619_1887_Aki_TMTPro18x_K_F7 60.118 47.065 24467 18797 30196 30025 32974 35632 27028 31547 36997 30494 40304 41877 39336 37783 36370 30346 47178 44736 22659 17301 30231 29457 33869 35498 27934 32477 37232 31239 41160 41842 40074 38712 37594 31445 45018 42347 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13066000 26418 2240 24814 49629;49630 40014 40014 1 9606 Homo sapiens -0.006996122942155125 TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK Unmodified 2980.1953 0.19525838 1455 Q6NTA2;A0A384N6C7;P14866;B2R959 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 2.2 0.748 1 2 2 32.793 32.845 4;5 4.5253E-43 7075 20230619_1880_Aki_TMTPro18x_K_F1 198.63 198.5 161510 116880 124770 175290 169700 190350 168660 183440 273170 231980 252500 296090 292300 276160 197190 303920 345020 294330 148960 107520 130790 172270 173010 191110 173280 189170 271460 233940 261900 296920 292910 286790 210910 304140 328330 279850 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 2192100000 26419 1455 24815 49631;49632;49633;49634;49635 40015;40016;40017;40018;40019 40016 5 9606 Homo sapiens -0.21563144325273242 TDNTVPFK Unmodified 920.46035 0.46034682 4745 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4;Q8N6E6 PAXBP1;C21orf66 PAX3- and PAX7-binding protein 1 yes no 0 0 0 6.5 0.5 1 1 46.628 46.712 2 0.0070555 12454 20230619_1886_Aki_TMTPro18x_K_F6 108.74 57.841 54391 38348 43958 53275 57052 64325 59672 54554 73275 68134 73071 73339 72146 52056 56092 79963 77145 68737 50170 35250 45782 52687 58350 63968 60406 56784 73860 68300 74915 73510 72857 55892 58613 79204 73550 65437 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27248000 26420 4745 24816 49636;49637 40020;40021 40020 2 9606 Homo sapiens -0.003064943735239467 TDPAHDVR Unmodified 909.43044 0.43044367 883 Q8TBN2;A0A087X0S5;A0A384P5H7;P12109;A0A804HJ28 COL6A1 Collagen alpha-1(VI) chain yes no 0 0 0 1 0 1 27.135 27.135 3 0.010284 4902 20230619_1880_Aki_TMTPro18x_K_F1 74.92 52.09 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26421 883 24817 49638 40022 40022 1 9606 Homo sapiens -0.02789433318855572 TDPENTDYTMEHGATR Oxidation (M) 1852.7534 0.75337031 4454 Q9BW85;M0R2S3 CCDC94 Coiled-coil domain-containing protein 94 yes no 0 1 0 1.5 0.5 1 1 32.65 32.68 3 2.108E-15 7048 20230619_1880_Aki_TMTPro18x_K_F1 191.44 174.3 14645 8718.4 9193.7 11849 14575 14715 15377 15952 18135 13816 21644 16957 17964 15723 14700 19791 20079 19002 13477 8018.4 9890.4 11743 14741 14689 15538 16149 18427 14180 21841 17065 18301 16468 15330 19764 19152 18061 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41210000 26422 4454 24818 49639;49640 40023 40023 2776 1 9606 Homo sapiens -0.13889624354169428 TDPRPDAATIK Unmodified 1183.6197 0.619701 1552 A0A494C1B8;P29144;Q5VZU9;A0A494C0U1;A0A494C0A3;A0A494C1S6 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 1 5.5 0.5 1 1 38.375 38.463 3 0.0026946 8890 20230619_1886_Aki_TMTPro18x_K_F6 81.239 49.304 143350 114970 130400 139700 156870 168490 157540 161570 207920 181170 196800 179040 202740 173580 154970 206280 228260 189240 132440 105470 134000 139440 160950 168050 160350 166010 208460 182070 202500 181790 204550 180940 162730 205680 217420 180070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 272010000 26423 1552 24819 49641;49642 40024 40024 1 9606 Homo sapiens 0.035235941837981954 TDPSILGGMIVR Unmodified 1257.6751 0.67510739 3597 P48047 ATP5O ATP synthase subunit O, mitochondrial yes yes 0 0 0 4.5 3.5 1 1 58.384 58.407 2 2.0279E-06 17853 20230619_1880_Aki_TMTPro18x_K_F1 148.73 121.02 300780 263270 290890 318970 256190 309080 321810 343540 356750 385760 365200 380760 404650 362640 362820 431180 397960 406400 278160 241440 296010 317490 270840 314050 321890 349650 362020 387360 376150 386150 409900 378190 371990 430640 380490 386230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 731260000 26424 3597 24820 49643;49644 40025;40026 40025 2 9606 Homo sapiens 0.05657684379912098 TDPSVRPMHER Unmodified 1323.6354 0.63536784 593 A0A024R9U3;Q9NX40;D6RDK6;D6RBN5 OCIAD1 OCIA domain-containing protein 1 yes no 0 0 1 4.5 0.5 1 1 25.129 25.199 4 0.00022913 3803 20230619_1883_Aki_TMTPro18x_K_F4 96.756 73.38 254030 178380 218060 239690 310330 342990 325820 309310 370980 302940 359460 356040 343000 293610 351960 340500 421120 372630 234410 163910 226080 238300 315570 338140 328840 318100 374640 308260 368660 357000 351120 307410 361460 343270 401920 353770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 220370000 26425 593 24821 49645;49646 40027;40028 40027 2 9606 Homo sapiens -0.013504425707878909 TDPTTLTDEEINR Unmodified 1503.7053 0.70528113 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 1.33 0.471 2 1 45.978 46.004 2;3 5.8641999999999995E-21 12581 20230619_1881_Aki_TMTPro18x_K_F2 230.41 209.54 172170 129680 144310 154120 141370 171140 159700 161250 179810 191550 220690 213090 223880 194980 184350 224050 248330 226390 158910 118980 148940 153880 147770 171520 160650 166230 183690 192610 224550 214810 226580 203230 191890 224710 236830 215090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 881520000 26426 2973 24822 49647;49648;49649 40029;40030 40030 2 9606 Homo sapiens -0.02642330211870103 TDPVDIYK Unmodified 949.47566 0.47566253 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;A0A0J9YXZ5 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 4 0 1 49.684 49.719 2 0.0044137 13862 20230619_1883_Aki_TMTPro18x_K_F4 123.92 78.604 183340 135740 152630 152660 183840 190270 182670 173880 215070 211590 220970 241590 259100 202730 220370 237160 247000 241160 169200 124480 158050 153330 188470 189250 185240 179780 217580 212750 228230 242500 261280 212290 226320 237960 236030 229040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185020000 26427 707 24823 49650 40031 40031 1 9606 Homo sapiens -0.001096275763416088 TDQADGPREPPQSAR Unmodified 1623.7601 0.76011066 2374 B3KPD3;Q9NQS7-2;Q9NQS7 INCENP Inner centromere protein yes no 0 0 1 2 0 1 28.24 28.315 3 7.0882E-11 5118 20230619_1881_Aki_TMTPro18x_K_F2 142.45 106.06 11014 6565.1 7683 7382.3 8145.1 11205 8071.4 8342 11441 11341 14215 9284.9 11988 12677 10720 7895.4 10651 9310.7 10141 6026.4 8088 7439.2 8455.6 10970 8250.5 8794.2 11569 11249 14319 9642.2 12258 12706 10903 8104.6 10182 8833.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14570000 26428 2374 24824 49651 40032 40032 1 9606 Homo sapiens -0.02681898620562606 TDQAFVTLTTNDAYAK Acetyl (Protein N-term) 1799.8578 0.85775902 2221 G5E9W8;B4DSX6;C9JQ42;B2R5R5;P46976-3;P46976-2;P46976 GYG1 Glycogenin-1 yes no 1 0 0 4 0 1 63.023 63.029 3 2.1096E-11 19604 20230619_1883_Aki_TMTPro18x_K_F4 81.703 68.024 31492 27585 35049 38980 33683 42207 35454 36779 38292 44023 42678 41503 49611 37153 40889 49814 43823 50019 29160 25340 35316 38453 35172 42289 35754 38142 39067 44019 43872 42114 49962 39167 41946 49837 41944 47484 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66234000 26429 2221 24825 49652 40033 40033 1 9606 Homo sapiens -0.010175545350648463 TDQENNNNISSNPFAALFGSLADAK Acetyl (Protein N-term) 2679.2413 0.2412525 2509 B4DK32;Q14139;Q14139-2;Q05BZ7 UBE4A Ubiquitin conjugation factor E4 A yes no 1 0 0 6 1 1 1 69.038 69.069 3 2.2348E-08 21717 20230619_1887_Aki_TMTPro18x_K_F7 40.404 36.135 8184.4 9171.2 6368.1 10063 8755.1 8974.3 10990 10088 8848.3 9729.6 8856.9 10657 10012 9897.3 11749 11128 10122 12235 7571.4 8396.5 6680.3 10074 8955.6 9188.3 10879 10226 9143.6 9876.1 9158.4 10747 10272 10295 11824 11227 9715.1 11601 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11422000 26430 2509 24826 49653;49654 40034;40035 40035 2 9606 Homo sapiens -0.03119847405105247 TDQFPLFLIIMGK Oxidation (M) 1537.8214 0.82143728 2145 A8K9X5;Q9UNN5;Q9UNN5-2;B4DEJ6;B3KT28 FAF1 FAS-associated factor 1 yes no 0 1 0 4 0 1 65.818 65.829 3 0.037276 20745 20230619_1883_Aki_TMTPro18x_K_F4 45.115 40.647 4652.4 4490.9 5098.7 5913.6 6786.4 3674.8 3437.8 4834.3 5512.6 5481.2 6902 5750.7 6169.5 5251.1 6016.2 6369.8 5505.7 7956.2 4310.2 4120.7 5164.7 5826 6799.2 3923.8 3733.2 4876.1 5556.2 5511.8 6974.9 5815.1 6310.5 5495.4 6095.4 6469.9 5289.7 7531 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6060200 26431 2145 24827 49655 40036 40036 1342 1 9606 Homo sapiens 0.07403941825123184 TDQFPLFLIIMGK Unmodified 1521.8265 0.82652266 2145 A8K9X5;Q9UNN5;Q9UNN5-2;B4DEJ6;B3KT28 FAF1 FAS-associated factor 1 yes no 0 0 0 5 0 1 67.489 67.531 3 0.0012944 21149 20230619_1885_Aki_TMTPro18x_K_F5 81.494 67.287 6399 4480.3 4809.9 4866.6 2937.7 4038.6 3779.9 3787.4 8300.1 3777.1 3353.2 6953 5024.9 5960.4 7177.8 5792.4 6222.4 6153.5 5899.5 4108.2 4989.7 4874.8 3242.9 4141.3 3900.3 3891.4 7988.9 3925.7 3775.3 6869.2 5192 6161.5 7200.2 5849.8 5962.3 5841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7430600 26432 2145 24827 49656 40037 40037 1 9606 Homo sapiens 0.08648245687754752 TDRGGDSIGETPTPGASK Unmodified 1744.8228 0.8227705 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 1 4 0 1 38.009 38.052 3 4.5955E-08 8787 20230619_1883_Aki_TMTPro18x_K_F4 121.01 101.69 19070 19615 17425 19168 21592 19652 19929 20332 22299 23223 23091 20744 24273 17495 19380 24935 25534 23382 17649 17945 17905 19414 22025 19876 20267 20799 22630 23235 23685 21074 24487 18563 20162 24833 24356 22233 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75814000 26433 3309 24828 49657 40038 40038 1 9606 Homo sapiens -0.01984797343061473 TDRLEVCR Unmodified 1047.5131 0.51312744 924 Q9NR56;Q9NR56-5;Q9NR56-2;C9JP00;Q9NR56-6;Q9NR56-7;H7C4T5;A0A0A0MQX8;Q86VM6;B4E233;C9JCX1;H7C4Y1 MBNL1 Muscleblind-like protein 1 yes no 0 0 1 4.5 0.5 1 1 33.192 33.261 3 0.00084858 6823 20230619_1883_Aki_TMTPro18x_K_F4 120.15 92.63 130890 109750 129390 138710 198900 203780 191890 210890 248270 170970 205780 197420 202130 174050 179310 194380 243120 201230 121040 100710 132680 138560 200870 201280 195560 213740 247770 175860 212880 198540 205430 181360 186310 195370 231710 191210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87011000 26434 924 24829 49658;49659 40039;40040 40039 2 9606 Homo sapiens -0.008728595823413343 TDRPLPENPYHSR Unmodified 1580.7696 0.76955314 3629 P51970 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 0 0 1 5.5 0.5 1 1 33.104 33.166 4 1.8227E-10 6917 20230619_1886_Aki_TMTPro18x_K_F6 173.71 153.33 59293 50361 58609 66318 79076 96641 78337 80409 98011 61279 83971 90030 97640 93152 72275 83380 93334 92856 54835 46230 59970 66026 80600 95000 79610 82746 98038 63936 87425 90227 98102 95413 75160 84464 89094 88097 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252330000 26435 3629 24830 49660;49661 40041;40042 40042 2 9606 Homo sapiens 0.002399144555965904 TDSCDVNDCVQQVVELLQER Unmodified 2406.0791 0.079137897 3250 O43252;Q05BW9 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 3.5 1.12 1 1 1 1 64.728 64.752 3 6.0016E-12 20326 20230619_1883_Aki_TMTPro18x_K_F4 141.97 133.98 21090 18181 20862 22377 23711 25755 24946 25846 27770 27919 30010 29676 36063 26860 30898 33282 31953 34264 19506 16677 21264 22299 24434 25790 25173 26448 28230 28156 30947 29963 36340 28159 31582 33390 30578 32526 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 93807000 26436 3250 24831 49662;49663;49664;49665 40043;40044;40045 40044 3 9606 Homo sapiens -0.06765850683223107 TDSDSDLQLYK Unmodified 1283.5881 0.5881261 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;Q01433-5;Q01433-3;Q01433-4;A0A7P0Z4H6;H0YF16;A0A590UJX5;A0A590UK85;A0A7P0TB79;E9PIJ1 AMPD2 AMP deaminase 2 yes no 0 0 0 3 0 1 50.394 50.469 2 1.8378E-08 14343 20230619_1882_Aki_TMTPro18x_K_F3 174.41 118 42434 38484 38199 51454 46690 49044 57131 53148 60525 59789 66857 51274 68020 56749 45769 77579 66992 59559 39232 35325 39373 50844 48086 49871 57080 54203 61709 59821 68210 52734 68335 59445 48279 76522 63841 56788 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83533000 26437 1570 24832 49666 40046 40046 1 9606 Homo sapiens -0.04232443360797333 TDSEIALLEGLTVVYK Unmodified 1749.94 0.94003209 650 Q53FU3;A0A024RB72;F8VVA7;P61923;F8VXB1;F8W156;F8VYZ4;P61923-5;P61923-4;F8VXR1;P61923-3;F8VYE0 COPZ1 Coatomer subunit zeta-1 yes no 0 0 0 6.5 0.5 1 1 65.285 65.321 3 0.029978 20250 20230619_1887_Aki_TMTPro18x_K_F7 47.545 29.628 10759 6117.3 9088.6 9266.4 7288.6 11842 7858.8 9714 9973.8 12477 13341 17912 15209 14424 15593 13906 12657 13486 9917.2 5634.6 9348 9128.2 7767.7 11717 7969.2 10141 10187 12622 13646 17797 15485 14953 15678 13970 12145 12811 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48341000 26438 650 24833 49667;49668 40047 40047 1 9606 Homo sapiens 0.09505967543827865 TDSPSCEYSR Unmodified 1200.4717 0.47171614 2082 A8K5Y7;Q9HAV4;B3KPQ5;Q9H8N6 XPO5 Exportin-5 yes no 0 0 0 1.5 0.5 1 1 31.792 31.824 2 1.482E-05 6718 20230619_1880_Aki_TMTPro18x_K_F1 163.16 153.57 30701 15319 36884 37784 45268 53361 42756 49251 40009 41198 54580 55178 58424 61832 47916 27050 64445 64455 28366 14230 37092 36470 46283 52620 43206 50356 41497 42499 55482 55559 59089 61724 49697 29918 61501 60823 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108830000 26439 2082 24834 49669;49670 40048;40049 40048 2 9606 Homo sapiens -0.12050085132364075 TDSTSDGRPAWMR Oxidation (M) 1494.6521 0.65214012 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;Q6P2H7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 1 5 0 1 33.849 33.934 3 0.030223 7059 20230619_1885_Aki_TMTPro18x_K_F5 60.49 40.749 15049 15347 16478 17124 20200 18030 19149 21851 21505 18982 25881 24578 28609 21855 24311 20836 24926 25624 13948 14056 16675 17171 20622 18265 19452 21974 21937 19505 26456 24614 28885 22596 24811 21237 23848 24284 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50123000 26440 3881 24835 49671 40050 40050 2561 1 9606 Homo sapiens -0.07539986475512706 TDSTSDGRPAWMR Unmodified 1478.6572 0.6572255 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;Q6P2H7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 7 0 1 39.958 40.023 3 0.00035653 9268 20230619_1887_Aki_TMTPro18x_K_F7 95.138 75.299 37972 32415 37693 39253 43868 52055 51924 45054 56369 50484 59272 49160 58642 48138 58668 55806 54707 52788 35119 29729 38431 39245 45318 51497 51999 46663 57256 50717 60590 49981 59848 50102 59422 55804 52368 50177 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34529000 26441 3881 24835 49672 40051 40051 1 9606 Homo sapiens -0.06295682612903875 TDTDLYEFAK Unmodified 1201.5503 0.55028404 1443 F5H7P7;B4DT22;A0A384MTS1;Q96BP3;D6R9Q1;B4DP34;Q96BP3-2;H0Y8N5 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes no 0 0 0 4 0 1 55.787 55.796 3 0.0023858 16559 20230619_1883_Aki_TMTPro18x_K_F4 91.584 74.217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26442 1443 24836 49673 40052 40052 1 9606 Homo sapiens -0.042429095556371976 TDTESELDLISR Unmodified 1377.6624 0.66235368 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 1.5 0.5 1 1 52.39 52.409 2 6.0525000000000006E-24 15300 20230619_1880_Aki_TMTPro18x_K_F1 259.08 197.52 426230 360100 358500 372220 329110 402560 378510 374250 417950 491730 509560 497330 551590 480340 491220 556120 524150 540080 393690 329810 369470 375510 346010 404230 380180 387450 427550 490780 520250 504140 558780 499990 502750 556590 501290 513080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1830899999.9999998 26443 2973 24837 49674;49675 40053;40054 40053 2 9606 Homo sapiens -0.011371002692840193 TDTGEPMGR Oxidation (M) 978.40766 0.40765932 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 1 0 1.5 0.5 1 1 27.545 27.584 2 0.012183 5014 20230619_1880_Aki_TMTPro18x_K_F1 74.301 59.525 56808 31508 78978 72159 88272 118590 70565 88140 89492 63871 104080 116800 93603 91772 90747 38799 126840 103000 52593 29195 78497 70049 90624 115540 72858 91448 90422 67358 105720 115190 95832 92694 94007 43627 120840 97240 4 3 4 4 4 4 4 4 3 3 4 4 4 4 4 4 4 4 75546000 26444 3177 24838 49676;49677 40055;40056 40055 1844 2 9606 Homo sapiens -0.0824082049862227 TDTGEPMGR Unmodified 962.41274 0.4127447 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 1.5 0.5 1 1 31.85 31.882 2 0.00020455 6400 20230619_1881_Aki_TMTPro18x_K_F2 144.12 124.49 100160 51021 127580 117730 154790 200050 115790 145580 152380 108250 182220 196660 158810 159500 158620 66003 201280 173290 92609 47326 127680 114330 157820 194550 120300 151400 154110 114200 184620 194170 162990 160800 163110 74181 191980 163560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 386610000 26445 3177 24838 49678;49679 40057;40058 40058 2 9606 Homo sapiens -0.06996516636013439 TDTLEDLFPTTK Unmodified 1379.682 0.68202649 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 5 0.816 2 2 2 62.233 62.268 2;3 5.9911E-07 18908 20230619_1885_Aki_TMTPro18x_K_F5 122.33 106.94 522170 431650 459140 503750 422270 561630 532110 547860 640660 683070 646040 650630 728470 654380 594790 778620 659860 751070 482380 395800 471510 503640 445530 563050 533580 564130 647100 682150 666100 662200 734770 681330 611830 778380 631360 713320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3793999999.9999995 26446 3444 24839 49680;49681;49682;49683;49684;49685 40059;40060 40060 2 9606 Homo sapiens 0.007372757414714215 TDTNVLYER Unmodified 1109.5353 0.53530267 822 A0A087WVD7;Q9Y3D8-2;Q9Y3D8;D6RDH4 TAF9;AK6 Adenylate kinase isoenzyme 6 yes no 0 0 0 3 0 1 41.919 41.982 2 0.0017164 10445 20230619_1882_Aki_TMTPro18x_K_F3 114.4 99.727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26447 822 24840 49686 40061 40061 1 9606 Homo sapiens -0.015083566329622045 TDTVLILCR Unmodified 1089.5852 0.58522975 552 Q6NVY0;A0A024R904;Q9HB71;Q9HB71-3 CACYBP Calcyclin-binding protein yes no 0 0 0 7.5 0.5 1 1 52.277 52.352 2 5.7872E-06 14545 20230619_1888_Aki_TMTPro18x_K_F8 182.39 102.21 1302000 1033300 1073000 1230900 1021000 1402400 1127900 1123900 1473300 955890 760750 702620 846320 780360 985020 1055500 969120 803690 1202000 947820 1109400 1228800 1070900 1398000 1141400 1163100 1451800 968900 817860 728170 868520 816540 998650 1042100 926260 766620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1799599999.9999998 26448 552 24841 49687;49688 40062;40063 40063 2 9606 Homo sapiens 0.0440205477134441 TDVETTYADFIASGR Acetyl (Protein N-term) 1686.7737 0.77369504 480 A0A024R7Y9;B2R4K1;P61925 PKIA cAMP-dependent protein kinase inhibitor alpha yes no 1 0 0 1.5 0.5 1 1 64.109 64.113 2 1.0478E-05 20450 20230619_1881_Aki_TMTPro18x_K_F2 81.92 74.894 9997.9 7724.4 8477.8 12289 3933.8 6539 10411 8647.4 5738.3 17244 18472 17868 19255 16402 18441 21202 20683 20720 9229.9 7109.1 8697.8 11951 4626.3 7089.4 9986.2 8932.4 6652.5 16961 18387 18066 19584 17221 18905 21194 19768 19685 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29202000 26449 480 24842 49689;49690 40064 40064 1 9606 Homo sapiens -0.04222085632022754 TDWDAGFK Unmodified 938.4134 0.41339662 3633 P52298;P52298-3;C9JQX9;B3KSB0;P52298-2 NCBP2 Nuclear cap-binding protein subunit 2 yes no 0 0 0 4.5 0.5 1 1 53.317 53.362 2 0.044079 15204 20230619_1885_Aki_TMTPro18x_K_F5 71.877 40.804 234650 204680 248140 244810 236920 304970 257420 258210 330900 340830 285690 296070 332530 249860 322660 338940 295010 304160 217170 187690 250810 244740 247950 302670 260670 269140 331410 338710 297410 300920 337170 264130 326840 337190 282590 289230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239960000 26450 3633 24843 49691;49692 40065 40065 1 9606 Homo sapiens -0.058273539246670225 TDWLDGK Unmodified 833.39193 0.3919329 2159;61 E9PEQ6;A8KAM9;Q9UNP9-2;Q9UNP9;Q9UNP9-3;E9PKY5;B3KSZ1;B4E3F2;B2R6X6;A0A024QZS4;P30405 PPIE;PPIF Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase E;Peptidyl-prolyl cis-trans isomerase F, mitochondrial no no 0 0 0 5 0 1 53.258 53.329 2 0.028102 15188 20230619_1885_Aki_TMTPro18x_K_F5 103.75 42.391 417010 359620 383900 389960 395050 499850 395190 414980 586030 495780 512930 502070 533910 486920 443290 563070 600670 564150 385480 329480 392980 392870 410440 495140 404410 431840 583100 497300 530380 509020 540380 506670 461690 564340 572940 535960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 211540000 26451 2159;61 24844 49693 40066 40066 1 9606 Homo sapiens -0.031427389533746464 TDYIPLLDVDEK Unmodified 1419.7133 0.71332662 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;P27816-5;B4DM10;Q6NX68;A0A024R2V2;A0A024R2S1;Q05D06;H7C456;A0A0J9YW37;P27816-7;A0A0J9YVV8 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 0 3 0 1 62.655 62.685 3 7.6409E-05 19518 20230619_1882_Aki_TMTPro18x_K_F3 114.24 95.459 59529 54295 54930 57716 52960 66385 62345 59900 71777 79645 76160 77900 83249 73461 76547 83494 86437 95826 55049 49726 56181 58141 55500 66329 62614 62170 72817 79382 78260 78993 84445 76472 78542 84411 82672 90851 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89291000 26452 2902 24845 49694 40067 40067 1 9606 Homo sapiens 0.020258487755427268 TDYMVGSYGPR Oxidation (M) 1260.5445 0.54448715 3634 V9HWE8;P52565;J3KTF8;J3QQX2;J3KRE2 HEL-S-47e;ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 0 1 0 6.6 1.02 1 1 2 1 42.321 42.387 2 0.00012624 10388 20230619_1886_Aki_TMTPro18x_K_F6 132.22 112.95 401340 303730 332060 377260 334840 404230 382520 418160 494080 464180 499740 551910 594340 510750 414790 649300 670290 598330 370410 278770 343430 375310 349500 406940 386470 427380 497240 469400 516720 555090 595390 535350 440310 646700 638360 569100 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1534499999.9999998 26453 3634 24846 49695;49696;49697;49698;49699 40068;40069;40070;40071 40069 2326 4 9606 Homo sapiens -0.07536331338928903 TDYMVGSYGPR Unmodified 1244.5496 0.54957253 3634 V9HWE8;P52565;J3KTF8;J3QQX2;J3KRE2 HEL-S-47e;ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 0 0 0 6.5 0.5 1 1 46.473 46.558 2 5.4152E-23 11938 20230619_1887_Aki_TMTPro18x_K_F7 254.83 228.04 391670 286160 325470 343550 245740 325370 303890 331440 404160 420150 393440 444460 517060 446510 369910 554080 536450 513930 361420 262590 335050 342070 263920 330460 306340 340550 405900 420650 409770 450210 517040 466110 388920 552280 511510 488640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1205200000 26454 3634 24846 49700;49701 40072;40073 40073 2 9606 Homo sapiens -0.06292027476320072 TDYNASVSVPDSSGPER Unmodified 1779.7911 0.79113602 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5;A0A994J795 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 2.71 1.03 1 2 2 2 43.337 43.392 2;3 1.7841E-23 11024 20230619_1883_Aki_TMTPro18x_K_F4 255.45 238.82 220310 167500 210200 229500 242400 276280 258010 252820 259670 275740 299290 266320 308190 261980 254460 344140 308210 294630 203550 153890 215000 227210 249690 275210 259320 260490 266120 277160 305340 270930 311730 274670 263160 341480 294280 280410 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6763399999.999999 26455 1865 24847 49702;49703;49704;49705;49706;49707;49708 40074;40075;40076 40076 3 9606 Homo sapiens -0.06756790097028897 TDYQLYASGSSSR Unmodified 1433.6423 0.64228694 3308 O75529;O75529-2 TAF5L TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L yes no 0 0 0 6 0 1 42.567 42.662 2 0.0078655 10622 20230619_1886_Aki_TMTPro18x_K_F6 78.653 53.798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26456 3308 24848 49709 40077 40077 1 9606 Homo sapiens -0.05718851209257991 TEAASDPQHPAASEGAAAAAASPPLLR Unmodified 2556.2568 0.25684299 178 A0A024R1Z6;Q99536;Q99536-3;K7ERT7 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes no 0 0 0 4.5 0.5 1 1 45.472 45.533 3 8.1434E-39 11887 20230619_1883_Aki_TMTPro18x_K_F4 204.61 198.04 72283 62433 75544 76550 89112 86102 91209 80893 74642 98288 94632 71003 74727 53303 96840 56873 58896 58980 66886 57266 76671 76282 91374 86265 91337 83472 77884 97505 95179 72701 77808 55839 95772 57353 56719 55997 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 180590000 26457 178 24849 49710;49711 40078;40079 40078 2 9606 Homo sapiens 0.04096483902731052 TEAEPTHVNEEK Unmodified 1382.6314 0.6313879 3790 Q02952-3;Q02952-2;Q02952 AKAP12 A-kinase anchor protein 12 yes no 0 0 0 1 0 1 33.641 33.641 3 2.491E-18 7432 20230619_1880_Aki_TMTPro18x_K_F1 198.32 160.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26458 3790 24850 49712 40080 40080 1 9606 Homo sapiens -0.044622535835287636 TEAHQDVVGR Unmodified 1110.5418 0.54178503 4491;3802 Q05CW7;E9PMU0;Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 no no 0 0 0 2 0 1 23.267 23.338 3 2.5872E-12 3892 20230619_1881_Aki_TMTPro18x_K_F2 192.38 129.56 15049 7209.4 20646 20842 29794 29517 20297 28429 24468 19624 28682 36208 24052 24615 25891 9798 33483 28511 13922 6721.3 20639 20014 29934 29139 21175 28859 24840 20802 29081 35552 24813 24986 26619 11191 31929 26900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28333000 26459 3802;4491 24851 49713 40081;40082 40081 2 9606 Homo sapiens -0.009064186815749053 TEALTQAFR Unmodified 1035.5349 0.53490874 4699 Q9Y230;B3KNL2;Q9Y230-2;M0R0Y3;B4DW30;X6R2L4;M0QXI6 RUVBL2 RuvB-like 2 yes no 0 0 0 7.5 0.5 1 1 48.56 48.637 2 0.055746 12992 20230619_1888_Aki_TMTPro18x_K_F8 66.299 49.372 171970 156800 165880 158580 163590 186920 195550 194780 214850 184850 183140 153820 186570 166440 196700 204510 173330 162110 159080 143540 168960 160520 171020 187100 195910 198120 216450 186470 189410 158180 190820 173210 198600 202540 165990 154470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 491300000 26460 4699 24852 49714;49715 40083 40083 1 9606 Homo sapiens 0.018562684378366612 TEAVGGEGPREPGAAGGAAGGSR Unmodified 2009.9515 0.95149326 3812 Q08AE8-2;Q08AE8 SPIRE1 Protein spire homolog 1 yes no 0 0 1 3 0 1 32.899 32.97 3 0.0082515 6767 20230619_1882_Aki_TMTPro18x_K_F3 59.539 43.947 10348 6134.2 7345.4 8604 7175 7009.4 6125.2 7824.7 8727.7 9988.7 12129 8618.3 9118.4 8152.1 9307 10729 13454 10423 9529.1 5643.7 7711.9 8463.6 7444.9 7229.4 6328.4 7992.4 8880 9934.3 12126 8810.6 9417 8560.5 9696.3 10718 12811 9914.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16474000 26461 3812 24853 49716 40084 40084 1 9606 Homo sapiens -0.013084423801046796 TECNHYNNIMALYLK Oxidation (M) 1898.8655 0.86550371 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5;Q16531-2 DDB1 DNA damage-binding protein 1 yes no 0 1 0 1 0 1 50.629 50.629 3 0.0003926 14611 20230619_1880_Aki_TMTPro18x_K_F1 89.466 71.549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26462 1710 24854 49717 40085 40085 1111 1 9606 Homo sapiens -0.047974418108196915 TECNHYNNIMALYLK Unmodified 1882.8706 0.87058909 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5;Q16531-2 DDB1 DNA damage-binding protein 1 yes no 0 0 0 2 0 1 56.772 56.788 3 1.3506E-10 17301 20230619_1881_Aki_TMTPro18x_K_F2 153.24 132.57 217990 157280 199460 215400 159520 202000 212610 201900 205540 228460 207840 198670 218580 190450 225180 240410 216740 212520 201280 144530 203690 212550 170460 205190 211130 207050 210030 228520 213620 202810 223070 199340 228480 239200 207420 202160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168810000 26463 1710 24854 49718 40086;40087 40086 2 9606 Homo sapiens -0.035531379482108605 TECTSLQFVSPFAFEAMQK Acetyl (Protein N-term) 2262.0337 0.033691254 24 A0A2R8Y4Z6;J3KMZ7;B4DQZ5;A0A024QZ48;J3KRH0;A0A2R8Y7F8 INTS2 yes no 1 0 0 7 0 1 66.79 66.813 3 0.00024584 20846 20230619_1887_Aki_TMTPro18x_K_F7 70.091 59.895 11612 10505 14407 10226 7732.6 11495 10752 11545 11766 14275 10601 11377 14485 13161 10624 12835 15044 17743 10765 9614.2 14279 10385 8657.4 11528 10713 11858 11903 14191 11105 11732 14487 13510 11127 13170 14370 16790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24694000 26464 24 24855 49719 40088 40088 1 9606 Homo sapiens -0.04684424407696497 TECYGYALGDATR Unmodified 1475.6351 0.63509307 105 Q9BPW0;H0YDU8;Q53FR0;A0A024R0Q7;P53041 PPP5C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 5 yes no 0 0 0 4 0 1 46.702 46.744 2 2.9779E-18 12489 20230619_1883_Aki_TMTPro18x_K_F4 218.43 206.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26465 105 24856 49720 40089 40089 1 9606 Homo sapiens -0.08369907081305428 TEDDFNDWCQQVK Unmodified 1683.6835 0.68349983 2522 B7ZA52;B4DL29;B4DNY2;B4DZK0;Q9Y4P1-4;Q9Y4P1-6;Q9Y4P1;Q9Y4P1-2;B3KVU2 ATG4B Cysteine protease ATG4B yes no 0 0 0 4 0.816 1 1 1 55.3 55.339 3 0.0078352 16370 20230619_1883_Aki_TMTPro18x_K_F4 68.121 58.541 94149 77260 93343 94735 90286 118850 98033 99088 122300 98237 105760 102540 113810 99102 105050 125360 119150 120900 87052 70879 94871 94547 94422 117840 99160 102560 122490 99539 109620 103870 115520 103710 107870 125240 113880 114870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94092000 26466 2522 24857 49721;49722;49723 40090;40091 40091 2 9606 Homo sapiens -0.13099458232068173 TEDIHLFQQVK Unmodified 1356.7038 0.70376498 2825 D3DU39 C3orf38 yes yes 0 0 0 5.5 0.5 1 1 51.014 51.09 3 0.0003565 14427 20230619_1886_Aki_TMTPro18x_K_F6 97.813 49.81 77938 67844 75288 79145 69748 76611 73954 68240 110920 76088 67268 68475 89208 61697 78678 92069 74606 79391 72076 62198 76631 78978 73074 77495 75438 70544 109110 76342 72034 69663 89768 65528 80041 91279 71455 75523 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132410000 26467 2825 24858 49724;49725 40092 40092 1 9606 Homo sapiens 0.039681252806758494 TEDLFENR Unmodified 1022.4669 0.46688876 1776 A0A8I5KWN8;A0A8I5KVU2;Q92615;H0Y4V9;A0A087X183;H0Y641;A0A8I5KSR3 LARP4B La-related protein 4B yes no 0 0 0 1.5 0.5 1 1 45.538 45.579 2 0.0076448 12386 20230619_1881_Aki_TMTPro18x_K_F2 107.01 86.487 121850 93755 109600 128620 135360 134280 128880 138850 176640 129680 146830 130920 153020 125910 128230 164200 153600 144090 112540 86135 112840 127060 138390 135470 131790 141270 175910 131690 152170 132840 154810 132060 132430 163160 146650 137100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85928000 26468 1776 24859 49726;49727 40093 40093 1 9606 Homo sapiens -0.04344601212812904 TEDQTLITK Unmodified 1047.5448 0.54480473 3829 Q12996;B4DMA4;E9PLP8;B4DFQ5 CSTF3 Cleavage stimulation factor subunit 3 yes no 0 0 0 4 0 1 45.66 45.705 2 5.6902E-05 12040 20230619_1883_Aki_TMTPro18x_K_F4 162.64 106.92 58098 41874 51546 55003 61721 59213 64206 60373 69642 73747 90718 82143 81925 75980 85202 68852 101740 92449 53632 38463 53074 54523 63315 59605 64766 61966 71470 74066 91655 82800 84095 78211 87395 70685 97116 87593 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30933000 26469 3829 24860 49728 40094 40094 1 9606 Homo sapiens 0.022934116525675563 TEDSLMPEEEFLR Oxidation (M) 1610.7134 0.71340297 146 A0A024R1K8;Q15459;Q15459-2;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 1 0 1 0 1 54.946 54.946 2 0.0049629 16428 20230619_1880_Aki_TMTPro18x_K_F1 74.267 68.774 21410 14374 15216 21436 21604 20680 20503 19311 26303 25884 24376 26143 29137 24136 21634 29109 26667 28575 19728 13227 16102 21040 21906 20942 20905 20007 26408 25822 25312 26454 29230 25230 22451 29121 25479 27139 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15943000 26470 146 24861 49729 40095 40095 65 1 9606 Homo sapiens -0.06752519286760617 TEDSLMPEEEFLR Unmodified 1594.7185 0.71848835 146 A0A024R1K8;Q15459;Q15459-2;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 1 0 1 59.634 59.634 2 3.5719E-15 18341 20230619_1880_Aki_TMTPro18x_K_F1 205.56 188.65 38520 28661 34865 40939 29225 43636 40088 37229 52038 47310 44890 49862 52939 48657 47576 58745 54849 65926 35570 26347 35690 40346 31212 43734 40148 38763 52047 47380 46780 50460 53557 50762 48939 59235 52486 62500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55745000 26471 146 24861 49730 40096 40096 1 9606 Homo sapiens -0.05508215424129048 TEDSLMPEEEFLRR Unmodified 1750.8196 0.81959938 146 A0A024R1K8;Q15459;Q15459-2;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 1 2 0 1 53.149 53.182 3 4.2131000000000003E-29 15844 20230619_1881_Aki_TMTPro18x_K_F2 259.27 200.09 113050 96761 103520 112310 96249 119460 121730 121140 129690 120450 117740 129490 139310 124500 112250 156710 137150 170270 104490 88709 105920 112270 101350 120280 121510 123640 131200 122060 122380 130910 140280 130290 116250 157570 131220 161450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99895000 26472 146 24862 49731 40097 40097 1 9606 Homo sapiens -0.02577763721433257 TEDTEHVIIPVCLR Unmodified 1680.8505 0.85050558 4739 Q9Y4E8-2;Q9Y4E8-3;Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 yes no 0 0 0 4 0 1 50.986 51.018 3 0.01768 14525 20230619_1883_Aki_TMTPro18x_K_F4 54.524 45.925 54119 51813 51317 35477 42680 46620 51337 54452 70344 59737 65033 59382 80920 56996 63796 55045 63457 53615 50074 47299 52135 37439 45283 46543 51868 55188 70347 60099 67611 60221 81176 58825 65098 55312 60651 50975 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308840000 26473 4739 24863 49732 40098 40098 1 9606 Homo sapiens 0.03731434383485066 TEEARPSPAPGPGTPTGTPTR Unmodified 2076.0236 0.023595574 3976 Q4KMP7 TBC1D10B TBC1 domain family member 10B yes yes 0 0 1 4.5 0.5 1 1 34.013 34.082 3 9.8373E-12 7176 20230619_1883_Aki_TMTPro18x_K_F4 114.63 97.141 23248 15803 19932 18060 25371 30401 28019 28259 30286 28977 29294 35084 36697 29932 31340 30116 33492 32522 21449 14499 20602 18224 26020 29748 28161 29019 30696 29433 30468 35138 36954 31060 32072 30406 32018 30868 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 35611000 26474 3976 24864 49733;49734 40099;40100 40099 2 9606 Homo sapiens 0.028624719735489634 TEEDSEEVR Unmodified 1092.4571 0.45711193 437 A0A024R7B7;Q16543;Q6FG59;K7EKQ2 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 0 0 1 0 1 30.132 30.132 2 1.1601E-06 6043 20230619_1880_Aki_TMTPro18x_K_F1 141.48 119.97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26475 437 24865 49735 40101 40101 1 9606 Homo sapiens -0.08541834008838123 TEEEEIDR Unmodified 1019.4407 0.44073359 3850 Q13435;E9PPJ0;Q7Z3K9;H0YEX5 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 0 1 0 1 33.419 33.419 2 0.0076725 7351 20230619_1880_Aki_TMTPro18x_K_F1 106.93 69.204 22545 10147 26168 29351 34547 43096 32978 36320 35911 24392 35701 41314 36605 35767 35139 15847 43686 40721 20816 9464.1 26437 28193 35208 42318 33439 37245 36361 25827 36722 40937 37297 36031 36115 17708 41696 38424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16311000 26476 3850 24866 49736 40102 40102 1 9606 Homo sapiens -0.06820915174932907 TEEFEVTK Unmodified 981.46549 0.46549177 4314 Q969H8;M0QXF7;M0QYN0 MYDGF Myeloid-derived growth factor yes no 0 0 0 2.5 0.5 1 1 47.22 47.297 2 7.9708E-07 12918 20230619_1882_Aki_TMTPro18x_K_F3 204.03 139.27 202030 142520 141630 168090 163030 231500 167240 194040 372650 211980 224020 342080 374530 366230 169880 515510 551870 602180 186190 130780 149420 168440 168780 228290 174580 201250 361680 217770 243880 342420 368680 384720 199330 519270 524680 570850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 236040000 26477 4314 24867 49737;49738 40103;40104 40104 2 9606 Homo sapiens -0.02598235301547902 TEEGEIDYSAEEGENRR Unmodified 1982.8454 0.84535644 1144 C9IYN3;A8K894;V9GYK2;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9-4;Q8WVV9;B7WPG3;Q8WVV9-5;A0A0S2Z610;Q8WVV9-3;Q8WVV9-2 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 0 0 1 1 0 1 37.474 37.474 3 3.5493999999999996E-72 8975 20230619_1880_Aki_TMTPro18x_K_F1 337.49 313.44 163660 129150 151540 151430 190280 210340 193830 191640 231030 191510 232810 242120 218760 199300 211590 241850 243170 250730 151210 118450 155550 151900 194750 207800 196340 197030 233150 195170 238230 242110 223500 209150 217200 242760 232410 238030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 472520000 26478 1144 24868 49739 40105 40105 1 9606 Homo sapiens -0.10675242736056134 TEEGLGFNIMGGK Unmodified 1351.6442 0.6442012 3005 G3V1D4;Q53FX5;Q9NUP9 LIN7C Protein lin-7 homolog C yes no 0 0 0 6.5 0.5 1 1 59.584 59.638 3 3.2087E-07 17670 20230619_1887_Aki_TMTPro18x_K_F7 117.79 95.919 43689 38205 41315 50218 41553 47838 51400 44601 54481 55594 53051 52621 57904 47849 53827 57737 56724 64643 40398 35067 42232 49678 43420 48476 51333 46115 55291 55512 54714 53390 58741 50064 54990 58234 54300 61296 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62880000 26479 3005 24869 49740;49741 40106 40106 1 9606 Homo sapiens -0.017555137250155894 TEEGPTLSYGR Unmodified 1208.5673 0.56733108 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991 MATR3;DKFZp686K23100 Matrin-3 yes no 0 0 0 3 0.816 1 1 1 41.062 41.121 2 4.0301E-17 10296 20230619_1881_Aki_TMTPro18x_K_F2 237.44 172.4 347870 250720 260930 329130 338790 386680 353100 376740 474600 416430 478860 481510 554110 432910 354530 564320 554700 516210 320760 230300 273910 326570 346660 386330 358900 386530 476630 420860 494100 484520 553580 455160 376210 561650 528530 490950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1284400000 26480 1059 24870 49742;49743;49744 40107;40108;40109 40107 3 9606 Homo sapiens -0.028609889498056873 TEELEEESFPER Unmodified 1493.6522 0.65218292 1525 A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 0 0 0 1 0 1 47.636 47.636 2 7.294100000000001E-24 13340 20230619_1880_Aki_TMTPro18x_K_F1 257.4 237.74 60218 49014 50687 64156 56884 70556 65298 61552 89255 78127 78966 86331 101500 84396 64976 107920 94163 99635 55607 44998 52472 63596 58947 70631 66059 63968 89155 78375 82488 87230 101160 88356 68565 107480 89851 94702 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155000000 26481 1525 24871 49745 40110;40111 40110 2 9606 Homo sapiens -0.07489707994523087 TEELKPQVEEK Unmodified 1328.6824 0.68236084 755 Q9UN86;Q9UN86-2;A0A024RDE5;A0A024RDB2;A8K6V7;A0A7I2YQD9;A0A7I2V3P9;A0A7I2V3E2;A0A7I2V647;A0A7I2YQS2 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 1 4.5 0.5 1 1 43.686 43.73 3 3.799E-06 11163 20230619_1883_Aki_TMTPro18x_K_F4 147.62 119.05 139880 102630 124170 151480 124800 162260 136680 147180 224830 207420 220600 232810 240460 223430 149750 309840 300050 295610 129140 94383 127640 149000 130320 162810 139860 153000 223840 207280 227300 235020 240800 235230 163050 308650 285600 280940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197850000 26482 755 24872 49746;49747 40112;40113 40112 2 9606 Homo sapiens 0.031166954613354392 TEEQGIPRPLHPPPPPPVQPPQHPR Unmodified 2797.4776 0.47761564 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3;Q69YJ6;G3V3B0;Q9UKV3-3;Q9UKV3-2 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 1 8 0 1 41.135 41.127 5 1.2863E-13 9853 20230619_1888_Aki_TMTPro18x_K_F8 139.79 126.36 15188 12466 21634 22493 22577 24530 24847 25094 26569 18410 23095 23872 22968 21124 23210 22025 24863 22466 14093 11490 21462 21904 23413 24646 24976 25422 26798 19142 23865 23902 23471 21916 23680 22151 23756 21342 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136240000 26483 2896 24873 49748 40114 40114 1 9606 Homo sapiens 0.15077593740443263 TEERAELAESR Unmodified 1289.6212 0.62115757 1095 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;A0A494C0P6;Q6LDX7 TPM3;DKFZp686J1372;TPM3-ROS1 Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor yes no 0 0 1 1 0 1 30.596 30.596 3 3.5576E-12 6224 20230619_1880_Aki_TMTPro18x_K_F1 176.87 158.09 143350 157240 127800 95297 194030 107960 133950 151450 126340 124310 132810 86300 119030 83372 126170 128350 146200 79311 132710 143390 131760 101880 193850 109730 138400 150850 129500 125850 135080 89484 122160 88516 129270 125520 139230 76095 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150380000 26484 1095 24874 49749 40115 40115 1 9606 Homo sapiens -0.012068165181062795 TEEVTALRR Unmodified 1073.5829 0.58292157 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;A0A024R0V9;H0YHT2;H0YIM6 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 0 1 4.5 0.5 1 1 34.497 34.566 3 2.7691E-06 7378 20230619_1885_Aki_TMTPro18x_K_F5 147.24 104.37 89236 63288 73358 85074 90019 93584 74380 86713 106100 82845 94572 96477 89865 96713 76614 115990 138050 119730 82323 58151 76135 84207 91828 93829 76919 88939 105770 84416 97351 97404 91466 100680 81739 116340 131360 113740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105410000 26485 4170 24875 49750;49751 40116;40117 40116 2 9606 Homo sapiens 0.04907342357910238 TEFDREIDR Unmodified 1179.552 0.55201537 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J4Q0;A0A994J432;A0A994J428;B3KRA9;A0A994J4Q4;A0A994J6R6;A0A994J4P6 HK1 Hexokinase-1;Hexokinase yes no 0 0 1 1.5 0.5 1 1 38.129 38.16 3 0.00085779 9274 20230619_1880_Aki_TMTPro18x_K_F1 108.3 95.536 249190 184540 244440 260880 378010 395130 378810 420870 471510 310850 366200 398730 386790 320950 346160 322850 373960 359870 230250 169630 250870 258910 382030 389840 384600 424940 470370 322920 381780 398100 392160 333750 354100 326620 357430 341470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 265450000 26486 43 24876 49752;49753 40118;40119 40118 2 9606 Homo sapiens -0.030578557470107626 TEFWLISAPGEK Acetyl (Protein N-term) 1418.7082 0.70818166 575 A0A024R9I0;P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes no 1 0 0 4.4 1.02 1 2 1 1 66.111 66.14 2;3 2.7958E-05 20864 20230619_1883_Aki_TMTPro18x_K_F4 79.148 61.823 111820 98402 94854 103920 82119 103200 93464 100270 103900 133590 121410 128630 138380 110560 130690 151660 137400 166460 103310 90127 97632 104530 86764 104370 93979 103520 106130 133000 124550 130190 140270 116890 133530 152480 131600 157840 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 195530000 26487 575 24877 49754;49755;49756;49757;49758 40120;40121;40122 40120 3 9606 Homo sapiens 0.015575897036114839 TEGDEEAEEEQEENLEASGDYK Unmodified 2499.9885 0.98851102 150 A0A024R1N4;P12956;P12956-2;B2RDN9 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 1.5 0.5 1 1 49.792 49.822 3 7.6492E-47 14212 20230619_1880_Aki_TMTPro18x_K_F1 265.54 257.64 91863 73477 72696 81350 88222 98554 97926 88214 99250 123320 119260 120160 135410 123920 106700 145360 125310 111550 84784 67350 75739 81745 90708 98143 98193 91779 101970 122640 122120 122270 136390 128750 110240 143750 119620 106360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2701000000 26488 150 24878 49759;49760 40123 40123 1 9606 Homo sapiens -0.20148369716753223 TEGISTSDIITR Unmodified 1291.662 0.66195975 2732 C9J050;C9JEJ2;P49585;D3DXB2;B4E322;B2R8P1;H7C1T3;H7BZN1;Q9Y5K3-2;Q9Y5K3-4;Q9Y5K3-3;Q9Y5K3 PCYT1A;hCG_2002711;PCYT1B Choline-phosphate cytidylyltransferase A;Choline-phosphate cytidylyltransferase B yes no 0 0 0 4 0 1 46.998 47.041 2 5.4334E-05 12622 20230619_1883_Aki_TMTPro18x_K_F4 155.26 132.52 85783 59562 59802 70051 87095 95617 89193 99882 120480 104470 100770 114180 98081 101180 100500 109170 115200 125780 79047 54657 63391 70226 88480 94842 90744 101790 120160 105650 104300 114970 100450 105160 103020 110490 110160 119250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109960000 26489 2732 24879 49761 40124 40124 1 9606 Homo sapiens 0.02779524801530897 TEGSDLCDR Unmodified 1051.424 0.42403766 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 1 0 1 32.62 32.62 2 5.8107E-12 6998 20230619_1880_Aki_TMTPro18x_K_F1 229.58 195.79 85365 44637 110020 108360 148360 168250 122790 158040 132740 90075 153660 178320 149100 144650 137900 61940 184620 164220 78945 41438 110280 104860 150350 165170 125720 160230 135290 97386 156640 175710 151920 145960 142550 69581 176050 154970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209550000 26490 3384 24880 49762 40125 40125 1 9606 Homo sapiens -0.09961739332561592 TEGTQEADQYADEK Unmodified 1583.6587 0.65872487 3790 Q02952-3;Q02952-2;Q02952 AKAP12 A-kinase anchor protein 12 yes no 0 0 0 1 0 1 41.862 41.862 3 0.00086385 10899 20230619_1880_Aki_TMTPro18x_K_F1 91.812 80.707 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26491 3790 24881 49763 40126 40126 1 9606 Homo sapiens -0.10975814833773256 TEHAEFLHCK Unmodified 1270.5765 0.57645598 3619 P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96 DNM2 Dynamin-2 yes no 0 0 0 5.5 0.5 1 1 36.366 36.442 4 6.3551E-07 8071 20230619_1885_Aki_TMTPro18x_K_F5 150.1 117.77 264060 36419 224410 248380 230150 196330 247990 246360 296230 293260 321300 326580 350440 292520 196210 373010 478220 354220 242600 35552 231410 232320 238780 203330 250560 249570 300080 294840 329530 328990 349690 307100 218710 371960 453970 337100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 245730000 26492 3619 24882 49764;49765 40127;40128 40127 2 9606 Homo sapiens -0.04800918865134918 TEHALLEGFNIR Unmodified 1398.7256 0.72556306 1119 B7Z6M7;F5H008;B7Z1N4;A0A2R8YDQ0;A0A0S2Z577;Q9H267-2;Q9H267 VPS33B Vacuolar protein sorting-associated protein 33B yes no 0 0 0 6 0 1 51.483 51.56 3 2.1504E-05 14570 20230619_1886_Aki_TMTPro18x_K_F6 122.55 89.655 62177 52806 59315 55462 59556 70590 66597 63998 81083 50797 48821 46087 56712 41724 48797 53390 57026 53142 57485 48370 60481 56027 62095 70086 67165 65479 80415 51968 51934 46883 57234 43839 50235 53437 54456 50491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67478000 26493 1119 24883 49766 40129 40129 1 9606 Homo sapiens 0.04214930029297648 TEIGVLLR Unmodified 899.54402 0.54401687 3951 Q16566;B2R747;D6REY7;D6RE65 CAMK4 Calcium/calmodulin-dependent protein kinase type IV yes no 0 0 0 7.5 0.5 1 1 52.815 52.887 2 0.019234 14790 20230619_1888_Aki_TMTPro18x_K_F8 100.39 42.831 229870 219870 228740 217120 138050 158100 182920 183930 207360 262210 259000 233180 261660 221150 215760 254780 250840 237980 212770 201210 230980 218960 151850 165130 182830 188290 212140 259800 263190 237650 264760 230320 222350 254460 239570 226260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 299410000 26494 3951 24884 49767;49768 40130 40130 1 9606 Homo sapiens 0.09022661794176656 TEIIILATR Unmodified 1028.623 0.62299547 3494 P23396;P23396-2;Q53G83;E9PL09;H0YEU2;E9PPU1;H0YCJ7;F2Z2S8;H0YF32;E9PK82;E9PJH4;E9PQ96 RPS3 40S ribosomal protein S3 yes no 0 0 0 3.67 3.09 1 1 1 56.111 56.138 2 0.0008186 16200 20230619_1888_Aki_TMTPro18x_K_F8 122.28 102.5 1529900 1165700 1382900 1406100 1143500 1439900 1465600 1408600 1848800 1617000 1507600 1421200 1617500 1347400 1654900 1672100 1384300 1834000 1412900 1069600 1413800 1401100 1217700 1452500 1470900 1447000 1847800 1617800 1567400 1449500 1648600 1410300 1667500 1684000 1330300 1738500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 627830000 26495 3494 24885 49769;49770;49771 40131;40132 40132 2 9606 Homo sapiens 0.10982889028446152 TEILPPFFK Unmodified 1090.6063 0.60628277 3309 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 2 0 1 62.895 62.904 3 0.017442 19936 20230619_1881_Aki_TMTPro18x_K_F2 52.591 27.374 690210 500620 703200 695160 621700 812500 708660 718850 904260 877930 824060 908580 970420 917150 906030 994100 864920 1199100 637870 460100 712110 687460 655820 810070 715740 745040 907260 880040 856320 921010 983270 949850 920790 1008900 830260 1135600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 370090000 26496 3309 24886 49772 40133 40133 1 9606 Homo sapiens 0.06460388142522788 TEIQTLFK Unmodified 978.5386 0.53859714 1020 Q8N6H7;G5E9L0;A0A0D9SF70;E9PN48;E9PQP3;B3KV00;E9PMU9;E9PIY6;E9PJT7;E9PMR9;E9PK28;B7Z6H9;H0YDX1;E9PNY8;E9PM63;E9PM18 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 yes no 0 0 0 8 0 1 57.271 57.323 2 0.0027265 16693 20230619_1888_Aki_TMTPro18x_K_F8 122.13 40.177 62538 47254 49031 57607 45250 70379 56294 63027 90783 48832 54902 68308 73488 64301 59599 80707 79803 102130 57696 43363 50951 57482 47865 69968 57167 64509 88959 50806 58906 68356 73811 67345 62086 81956 76314 96691 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18669000 26497 1020 24887 49773 40134 40134 1 9606 Homo sapiens 0.04846938211710494 TEISFRPNDPK Unmodified 1302.6568 0.65681479 1923 Q6LEU2;A3KLL5;P05026-2;P05026;A0A8I5KNT2;B7Z9S8;A6NGH2 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 1 7 0 1 43.516 43.595 4 0.00056533 10737 20230619_1887_Aki_TMTPro18x_K_F7 90.697 75.535 66542 64966 60884 72626 65707 98495 94886 88599 124340 83534 82077 79270 96507 89604 85170 94657 92527 92996 61561 59512 62524 73050 68908 97342 94794 91050 123180 84691 86810 81060 97576 92330 87262 94932 88462 88344 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55741000 26498 1923 24888 49774 40135 40135 1 9606 Homo sapiens 0.01759265729560866 TEITGAEIAEEMEK Unmodified 1549.7182 0.718154 935 A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBF7;E5RFD9 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 2 0 1 58.581 58.595 3 4.0276E-07 18051 20230619_1881_Aki_TMTPro18x_K_F2 137.62 123.37 40023 36674 41419 39527 41477 46243 48570 40331 48353 41766 39836 40822 45639 36983 45023 48031 46335 49510 37047 33591 41953 39791 43254 46130 48535 41674 48928 42125 41550 41365 46360 38875 45883 48162 44343 46997 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73878000 26499 935 24889 49775 40136 40136 1 9606 Homo sapiens -0.03471635144001084 TEIVFTGEK Unmodified 1022.5284 0.52842638 292 Q00341;A0A024R4E5;Q00341-2;H0Y394;Q6ZS03;B4DKR8;H7C0A4;Q5HYC5 HDLBP;DKFZp686L08115 Vigilin yes no 0 0 0 5 0.816 2 2 2 50.995 51.057 2;3 1.11E-05 14196 20230619_1885_Aki_TMTPro18x_K_F5 197.66 130.98 193030 149780 167580 187760 177910 214810 194480 206160 249630 229000 223540 213990 251810 197240 206210 258310 235770 215230 178230 137470 172650 186830 184720 214910 196850 211760 250160 229810 231700 217450 253850 207270 212400 256050 225160 204960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 343610000 26500 292 24890 49776;49777;49778;49779;49780;49781 40137;40138 40138 2 9606 Homo sapiens 0.018063304864767815 TEKPERPSR Unmodified 1098.5782 0.57817054 1675 H7BYN4;A0A7I2V5Y5;Q02241-2;Q02241;Q02241-3 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 0 0 2 6 0 1 27.213 27.247 4 0.041682 4845 20230619_1886_Aki_TMTPro18x_K_F6 52.725 36.501 19296 13719 35729 29506 51789 56662 38315 45773 37006 27030 43913 42963 49696 45556 35502 14080 43621 37584 17953 12688 35132 28829 52103 54943 39409 46971 38020 28833 44964 42952 49874 45254 36670 16060 41616 35470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9650000 26501 1675 24891 49782 40139 40139 1 9606 Homo sapiens 0.03282458215130646 TELAEPIAIRPTSETVMYPAYAK Oxidation (M) 2566.2989 0.29889072 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 1 1 7.5 0.5 1 1 55.905 55.965 4 2.288E-08 16146 20230619_1887_Aki_TMTPro18x_K_F7 117.31 103.99 95606 76934 105060 115530 103260 122480 111100 108490 115430 119530 132860 141150 150220 129850 136690 152780 141660 161270 88468 70744 105980 113530 107640 122940 111740 112140 118080 120870 136330 141960 152120 135520 139600 153590 135630 153020 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 629910000 26502 3402 24892 49783;49784 40140;40141;40142 40140 2019 3 9606 Homo sapiens 0.07839323266807696 TELAEPIAIRPTSETVMYPAYAK Unmodified 2550.304 0.3039761 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 1 8 0 1 58.548 58.594 4 2.5817E-08 17231 20230619_1888_Aki_TMTPro18x_K_F8 112.32 96.623 59351 49191 62283 55694 47704 66246 47373 60379 86914 62193 39750 60628 56843 47749 49960 67278 65496 63721 54907 45092 62766 55880 50884 66028 49041 62093 84419 62763 43884 61107 57191 50712 51875 67040 62504 60566 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 432940000 26503 3402 24892 49785 40143 40143 1 9606 Homo sapiens 0.0908362712939379 TELEDTLDSTAAQQELR Unmodified 1918.912 0.91197944 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5 MYH9 Myosin-9 yes no 0 0 0 1 0 1 55.229 55.229 3 2.6297E-13 16529 20230619_1880_Aki_TMTPro18x_K_F1 145.83 129.69 117670 104500 115720 120160 133500 134510 139250 142050 156900 160700 138930 129480 183000 152780 142480 188130 155430 155590 108850 95781 118000 120300 137320 135160 140610 145040 158280 160490 145230 133750 183440 158700 146570 186540 148590 148130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155260000 26504 148 24893 49786 40144 40144 1 9606 Homo sapiens -0.01072007174184364 TELHGQLISVEK Unmodified 1352.73 0.72997974 4613 Q9NWH9;H7C3F4;A0A024R5U7;A0A024R5X3;Q9NWH9-3;H7BXE3 SLTM SAFB-like transcription modulator yes no 0 0 0 5.5 0.5 1 1 46.274 46.355 3 0.0001652 12288 20230619_1886_Aki_TMTPro18x_K_F6 102.52 53.102 204310 160490 191220 218430 216230 228430 234930 210690 270580 239580 266000 230940 271090 214110 235570 264490 275770 249020 188770 147420 195880 215880 223100 229820 236820 217340 273350 240430 273090 234450 274750 224150 242530 264040 263280 236780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 561820000 26505 4613 24894 49787;49788 40145 40145 1 9606 Homo sapiens 0.06772394452173103 TELPQFVSYFQQR Unmodified 1641.8151 0.81510635 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 2.5 0.5 1 1 62.503 62.523 3 6.9092E-47 19462 20230619_1882_Aki_TMTPro18x_K_F3 260.28 245.29 101790 87472 104140 105220 96543 119100 110130 109880 128390 122000 117930 120520 126230 116520 127520 122290 131300 143220 94167 80219 105500 105000 101360 119150 110850 113210 129370 122640 121900 122250 128700 120630 129830 123990 125670 135770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 299450000 26506 307 24895 49789;49790 40146;40147 40147 2 9606 Homo sapiens 0.019871399179919536 TELQNTLR Unmodified 973.51926 0.51925868 3486 P22059 OSBP Oxysterol-binding protein 1 yes yes 0 0 0 5 0 1 40.181 40.271 2 0.031309 9637 20230619_1885_Aki_TMTPro18x_K_F5 78.264 37.037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26507 3486 24896 49791 40148 40148 1 9606 Homo sapiens 0.031439819208117115 TELQSALLLR Acetyl (Protein N-term) 1184.6765 0.6764876 3708 P62253;I3L0Q0;I3L2Q4 UBE2G1 Ubiquitin-conjugating enzyme E2 G1;Ubiquitin-conjugating enzyme E2 G1, N-terminally processed yes no 1 0 0 4 0 1 63.373 63.379 2 2.6173E-05 19779 20230619_1883_Aki_TMTPro18x_K_F4 113.7 93.416 6941.3 8105.4 8598 8019 6648.7 9002.3 8941.8 8113 10802 10218 11541 12985 12081 8518.3 9609.7 13751 13666 14946 6448.3 7413.3 8566.4 8124.9 7132.2 9009.3 8941.7 8410 10924 10297 11836 12906 12188 9218.6 10063 13785 13045 14179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19304000 26508 3708 24897 49792 40149 40149 1 9606 Homo sapiens 0.09153641740317653 TELTPAYF Unmodified 940.4542 0.45419881 1243 A0A140VKA9;P09417;P09417-2 QDPR Dihydropteridine reductase yes no 0 0 0 3.5 0.5 1 1 62.209 62.226 2 0.0075015 19257 20230619_1883_Aki_TMTPro18x_K_F4 121.68 111.93 167580 133920 156030 186120 135410 166830 160710 165260 158860 191060 185810 173920 191370 161630 194890 204750 196660 201360 154840 123030 159340 183340 143090 170060 160620 169670 163180 191120 189590 176990 195280 169440 198270 204840 188170 191270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 467630000 26509 1243 24898 49793;49794 40150 40150 1 9606 Homo sapiens -0.01841012605063952 TELTQIK Unmodified 831.47018 0.47018322 2053 Q5QPL9;A8K4T9;Q53GL6;Q9UKM9-2;Q9UKM9;Q5QPM0 RALY RNA-binding protein Raly yes no 0 0 0 6 0 1 46.025 46.111 2 0.0038383 12163 20230619_1886_Aki_TMTPro18x_K_F6 152.31 38.618 594090 436150 509590 577710 648520 690120 669430 642300 875860 638670 725590 663550 715670 590340 611660 616490 795510 613960 548340 400620 527210 573100 663520 688190 679780 659410 873760 646990 750500 670170 725890 612830 633880 619080 758110 583840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 564560000 26510 2053 24899 49795 40151 40151 1 9606 Homo sapiens 0.047706936318604676 TEMDWVLK Oxidation (M) 1036.4899 0.48993238 470 A0A024R7T3;P52597;B4DKS8;A0A1B0GW42 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 1 0 4.5 0.5 1 1 53.592 53.637 2 0.016678 15638 20230619_1883_Aki_TMTPro18x_K_F4 87.323 40.757 245850 220880 233930 256220 342680 356900 330820 341770 354350 316620 334610 290900 331880 273410 290990 345680 310050 339310 227380 202460 240420 257200 346850 352970 334900 349340 358850 320610 343810 296170 336800 286500 297990 345690 296670 322240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 297730000 26511 470 24900 49796;49797 40152;40153 40152 288 2 9606 Homo sapiens -0.02685298419692117 TEMDWVLK Unmodified 1020.495 0.49501776 470 A0A024R7T3;P52597;B4DKS8;A0A1B0GW42 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 0 0 6 0.816 1 1 1 60.201 60.253 2 0.00076897 18214 20230619_1886_Aki_TMTPro18x_K_F6 172.15 73.623 508870 435360 481650 508010 503450 727580 658130 662720 753440 692610 600400 588420 731760 572550 598380 700540 637290 670570 470470 399150 492390 509980 526820 717090 657310 681930 756210 695420 628840 601610 736050 598230 613530 699960 609610 637110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 439070000 26512 470 24900 49798;49799;49800 40154;40155 40155 2 9606 Homo sapiens -0.014409945570719174 TEMEDLMSSK Unmodified 1169.4944 0.49442542 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q6ZNL4;Q2PS10 MYH9;FLJ00279 Myosin-9 yes no 0 0 0 3 0 1 54.221 54.268 2 0.032498 16051 20230619_1882_Aki_TMTPro18x_K_F3 80.231 59.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26513 148 24901 49801 40156 40156 1 9606 Homo sapiens -0.08354202059103955 TEMIDQEEGIS Oxidation (M) 1266.5286 0.52856232 268 A0A024R3V8;Q99598 TSNAX Translin-associated protein X yes no 0 1 0 1 0 1 45.722 45.722 2 0.0036773 12547 20230619_1880_Aki_TMTPro18x_K_F1 87.308 78.445 21025 14429 20821 18837 16679 19140 18493 20246 20625 21959 26817 27828 23380 23115 24043 25892 28924 27893 19420 13255 21091 18673 17709 19354 18630 20652 21133 22271 27082 27825 24027 24129 24716 26083 27620 26476 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40819000 26514 268 24902 49802 40157 40157 160 1 9606 Homo sapiens -0.09404082366472721 TEMIDQEEGIS Unmodified 1250.5336 0.53364769 268 A0A024R3V8;Q99598 TSNAX Translin-associated protein X yes no 0 0 0 1 0 1 51.716 51.716 2 0.0031999 15058 20230619_1880_Aki_TMTPro18x_K_F1 91.783 91.783 19548 19890 18980 23389 22235 23413 23512 23649 28698 28842 24975 26215 33674 23913 26466 31374 30324 34733 18099 18227 19404 23332 22871 23687 23788 24282 28819 28791 26184 26651 33721 25171 27280 31578 29007 32938 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135950000 26515 268 24902 49803 40158 40158 1 9606 Homo sapiens -0.0815977850386389 TEMQDNTYPEILR Oxidation (M) 1624.7403 0.74028642 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 1 0 2.5 0.5 1 1 48.232 48.307 2 1.5835E-07 13583 20230619_1881_Aki_TMTPro18x_K_F2 155.33 148.13 54598 49581 48585 53019 63480 63486 55726 57678 71164 75048 75228 68898 79676 67005 64078 89292 79956 79517 50474 45411 50093 53413 64540 63312 57122 59769 71838 74738 77122 70209 80443 70356 66451 88749 76345 75631 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171280000 26516 3246 24903 49804;49805 40159;40160 40159 1915 2 9606 Homo sapiens -0.04709410675559411 TEMQDNTYPEILR Unmodified 1608.7454 0.7453718 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 3 0.816 1 1 1 52.122 52.174 2 6.0365E-26 14955 20230619_1883_Aki_TMTPro18x_K_F4 234.65 213.28 62296 61526 61287 70983 53003 70580 67119 66041 70735 96212 84999 87226 103710 89729 77842 110130 98370 102960 57670 56375 62293 70904 56179 71289 66996 68594 72567 95317 87351 89043 104050 93551 80923 109840 93953 97855 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 163850000 26517 3246 24903 49806;49807;49808 40161;40162;40163 40163 3 9606 Homo sapiens -0.0346510681295058 TEMQNMIELSR Unmodified 1350.6272 0.62717092 4096 Q69YJ7;Q9NTZ6;A6PVI1;A6PVI0;Q5JX62 DKFZp667H197;RBM12 RNA-binding protein 12 yes no 0 0 0 4.5 0.5 1 1 52.722 52.769 2 1.8052E-08 15041 20230619_1885_Aki_TMTPro18x_K_F5 174.77 143.35 73277 58565 71565 69583 60336 72861 68793 72032 69966 80842 81097 90180 87284 77253 84334 93270 89945 98693 67734 53716 72661 69435 63830 73405 68967 73881 71717 81480 83032 90666 88766 80952 86170 93748 86065 93650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58939000 26518 4096 24904 49809;49810 40164 40164 1 9606 Homo sapiens -0.03411757602452781 TEMSEVLTEILR Unmodified 1419.7279 0.72793082 3189 M0QXU7;Q9UPE4;Q53G69;O43615;M0QXM9 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 yes no 0 0 0 5.5 0.5 1 1 64.634 64.678 3 9.577900000000001E-35 20006 20230619_1885_Aki_TMTPro18x_K_F5 197.07 163.19 8989.5 12048 12131 12018 11746 13956 10806 12448 17029 11817 17910 17066 15427 15317 16192 16788 15161 17459 8369.5 11016 12055 12173 12218 13935 11152 12803 17002 12149 18219 17041 15872 15921 16399 16884 14532 16567 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4642300 26519 3189 24905 49811;49812 40165;40166 40165 2 9606 Homo sapiens 0.034855976520702825 TENCLSSCVDR Unmodified 1339.5496 0.54964888 4747 Q9Y5J9;G3XAN8 TIMM8B Mitochondrial import inner membrane translocase subunit Tim8 B yes no 0 0 0 2.5 0.5 1 1 37.573 37.63 2 4.6964E-23 8620 20230619_1882_Aki_TMTPro18x_K_F3 256.48 236.49 140550 102490 112050 110250 137780 160790 110950 103390 157860 142210 131420 124440 153130 114650 94401 167590 164650 142110 129660 93955 116550 111360 140610 157470 114860 110620 157180 141230 136880 126870 152790 121440 101300 165900 156700 135330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 164120000 26520 4747 24906 49813;49814 40167;40168 40168 2 9606 Homo sapiens -0.10654395538631434 TENNDHINLK Unmodified 1196.5786 0.57856447 536 A0A024R8S3;P61956-2;P61956 SUMO2 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2 yes no 0 0 0 3.75 0.829 2 1 1 37.843 37.906 3 0.00057995 8634 20230619_1883_Aki_TMTPro18x_K_F4 97.734 44.165 1305000 867060 1126000 1225400 1356200 1311700 1340600 1252500 1741200 1523300 1689200 1771300 1743900 1479200 1451700 1588100 2009900 1988900 1203900 797360 1162500 1208800 1389700 1318800 1364600 1291400 1748500 1533100 1738100 1776400 1764800 1541800 1512800 1616200 1917600 1884900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5669200000 26521 536 24907 49815;49816;49817;49818 40169;40170;40171 40170 3 9606 Homo sapiens -0.011861668557003213 TENPLILIDEVDK Unmodified 1497.7926 0.79263957 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 4 0 1 63.277 63.283 3 0.0023259 19744 20230619_1883_Aki_TMTPro18x_K_F4 72.417 48.949 37144 25160 32202 39460 23964 31608 34980 32200 37475 63309 59378 69787 77882 59744 51860 84481 66817 89880 34272 23164 33050 38547 25890 32552 34728 33711 39029 62464 60742 70193 77619 63306 54208 84687 63945 85227 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63528000 26522 2417 24908 49819 40172 40172 1 9606 Homo sapiens 0.06365495729733084 TEPATDLGR Unmodified 958.47197 0.47197413 1440 B2R694;A0A384MTQ5;P48449-3;P48449;C9J315 LSS Terpene cyclase/mutase family member;Lanosterol synthase yes no 0 0 0 2 0 1 35.972 36.029 2 0.00034695 8084 20230619_1881_Aki_TMTPro18x_K_F2 110.12 71.982 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26523 1440 24909 49820 40173 40173 1 9606 Homo sapiens -0.008922973501853448 TEPEEVSIEDSAQSDLK Unmodified 1875.8585 0.85854688 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8 IFI16 Gamma-interferon-inducible protein 16 yes no 0 0 0 1 0 1 52.245 52.245 2 1.1716000000000001E-30 15275 20230619_1880_Aki_TMTPro18x_K_F1 225.23 202.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26524 2829 24910 49821 40174 40174 1 9606 Homo sapiens -0.0443480467667996 TEPMDADDSNNCTGQNEHQR Unmodified 2317.8924 0.89239976 3259 Q6IAZ5;O43513 CRSP9;MED7 Mediator of RNA polymerase II transcription subunit 7 yes no 0 0 0 1 0 1 30.873 30.873 3 7.433E-23 6341 20230619_1880_Aki_TMTPro18x_K_F1 188.41 185.31 1870 1298.8 2547.2 1668.1 2471 1757.2 2193.7 1801 3276.3 2176.2 3060.5 3069.7 2891.4 2095.3 1675.3 2484.8 3184 3030.4 1732.7 1192.9 2523.2 1657.6 2557.7 1774.1 2261.6 1848.5 3262.9 2208.5 3140.1 3042.6 2897.5 2215.9 1812.5 2518.7 3030.8 2873.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4301500 26525 3259 24911 49822 40175 40175 1 9606 Homo sapiens -0.21383074518917056 TEPTAQQNLALQLAEK Unmodified 1753.921 0.92102798 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 6 0.816 1 1 1 56.399 56.465 3 4.4483E-12 16468 20230619_1885_Aki_TMTPro18x_K_F5 157.8 146.59 181990 187850 196610 218680 151560 188050 176040 200770 227250 267850 232010 216270 207170 226100 218920 256600 249510 280980 168670 172110 197960 217950 161860 192790 177840 205980 229030 265480 236650 222210 213170 234410 224320 258620 238650 266500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1019399999.9999999 26526 12 24912 49823;49824;49825 40176;40177;40178 40176 3 9606 Homo sapiens 0.07422430972837901 TEQAISFAK Acetyl (Protein N-term) 1035.5237 0.52367535 3439 P12236;Q6I9V5 SLC25A6 ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed yes no 1 0 0 3 0.816 1 1 1 55.5 55.524 2 2.8E-05 16449 20230619_1883_Aki_TMTPro18x_K_F4 73.26 69.326 572310 467150 497110 583750 560010 672920 672450 618520 678430 794180 709250 755820 745690 638280 709680 925920 825550 856080 528610 428660 512870 580980 580180 672320 671490 640400 692790 791820 728280 765050 758370 677420 729900 921220 788970 813740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1235100000 26527 3439 24913 49826;49827;49828 40179 40179 1 9606 Homo sapiens 0.007334463437246086 TEQALPDSELAEYAR Unmodified 1691.8002 0.80024414 2418 B3KU98;X6R3U4;Q7Z736-4;Q7Z736-3;Q7Z736-2;Q7Z736 PLEKHH3 Pleckstrin homology domain-containing family H member 3 yes no 0 0 0 2 0 1 52.407 52.446 2 0.00060745 15480 20230619_1881_Aki_TMTPro18x_K_F2 93.649 53.297 11604 7572.3 11714 13195 13221 11995 15132 12475 11499 13728 13512 17089 12835 13676 15271 14225 19160 21938 10717 6982.7 11921 12839 13630 12231 15031 12759 12012 13900 13774 17063 13261 14247 15694 14719 18314 20745 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32633000 26528 2418 24914 49829 40180 40180 1 9606 Homo sapiens -0.017983967406507873 TEQCLVALLHK Unmodified 1310.7017 0.70165649 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 0 1.5 0.5 1 1 56.584 56.593 3 3.1391E-05 17234 20230619_1881_Aki_TMTPro18x_K_F2 136.53 105.87 62126 57508 66470 63516 62877 62875 66135 58803 68566 71301 61871 48140 66898 58732 69481 74024 61115 64008 57527 52683 67077 63676 65609 63582 66578 60709 69504 70706 63947 50342 68244 61048 70174 73572 58575 60891 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190340000 26529 4666 24915 49830;49831 40181 40181 1 9606 Homo sapiens 0.058733732712198616 TEQGEEEEEEEDEEEEEK Unmodified 2224.8139 0.8139007 1108 A0A0S2Z4W4;Q7Z3D7;P98175-2;P98175;P98175-5 DKFZp686E2459;RBM10 RNA-binding protein 10 yes no 0 0 0 1 0 1 40.994 40.994 3 4.2773E-19 10519 20230619_1880_Aki_TMTPro18x_K_F1 187.78 187.27 34136 23639 27092 35344 32818 38561 35408 37677 55602 38382 48894 42741 50560 43631 39444 46875 47307 48289 31481 21749 28247 34749 33780 38707 36161 38568 55158 38934 50489 43265 51031 45147 40780 47115 45194 45846 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125990000 26530 1108 24916 49832 40182 40182 1 9606 Homo sapiens -0.24951369861901185 TEQGPQVDETQFK Unmodified 1505.6998 0.69980182 1475 P05091;A0A384NPN7;Q53FB6;P05091-2;B4YAH7;S4R3S4 ALDH2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 2.5 0.5 1 1 46.335 46.414 3 1.3551E-08 12487 20230619_1882_Aki_TMTPro18x_K_F3 166.62 150.4 185450 139250 180460 179490 195180 216980 211740 210140 250690 243590 270070 322890 268830 258560 262110 299300 291870 311430 171360 127860 183960 178460 202070 216390 213750 216060 253940 246790 276510 321860 274320 270790 268510 300710 279110 295590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 372950000 26531 1475 24917 49833;49834 40183 40183 1 9606 Homo sapiens -0.03282009003669373 TEQGPQVDETQFKK Unmodified 1633.7948 0.79476484 1475 P05091;A0A384NPN7;Q53FB6;P05091-2;B4YAH7;S4R3S4 ALDH2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 1 5 0 1 44.558 44.637 3 0.068816 11479 20230619_1885_Aki_TMTPro18x_K_F5 39.005 19.427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26532 1475 24918 49835 40184 40184 1 9606 Homo sapiens 0.003219244674937727 TEQMTLR Acetyl (Protein N-term);Oxidation (M) 935.43823 0.43823117 2907 P63244;E9KL35;J3KPE3;D6RAC2;D6REE5;D6RHH4;D6RFZ9;D6RBD0;E9PD14;D6RAU2;B4E0C3;B4DWC6;D6RGK8;D6R909;D6RHJ5;D6RDI0 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 1 1 0 1 0 2 31.227 31.227 2 0.026523 6951 20230619_1880_Aki_TMTPro18x_K_F1 61.561 57.205 7765.2 5536.1 8692.8 8939.1 7534.2 9247.1 7585.9 9380.5 9914.9 8596.2 12582 11756 11742 8535.3 8817.8 8129.4 10380 8869.1 7181.6 5097.8 8737 8748.4 7928 9322.9 7729.3 9550.8 10064 8824.4 12735 11683 11859 8893.7 9099.5 8222.1 9905.8 8421.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12593000 26533 2907 24919 49836;49837 40185;40186 40186 1727 2 9606 Homo sapiens -0.032070421135813376 TEQMTLR Acetyl (Protein N-term) 919.44332 0.44331654 2907 P63244;E9KL35;J3KPE3;D6RAC2;D6REE5;D6RHH4;D6RFZ9;D6RBD0;E9PD14;D6RAU2;B4E0C3;B4DWC6;D6RGK8;D6R909;D6RHJ5;D6RDI0 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 1 0 0 1 0 1 41.21 41.21 2 0.0028037 10607 20230619_1880_Aki_TMTPro18x_K_F1 148.28 119.75 27780 21911 21354 27790 22800 26402 31178 32798 26222 28312 34769 28171 29106 24926 25743 30009 33926 27610 25633 20111 22295 27563 23799 26943 30803 32941 27323 28828 34977 28530 29729 26084 26710 29931 32338 26273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276710000 26534 2907 24919 49838 40187 40187 1 9606 Homo sapiens -0.019627382509725066 TERDELLK Unmodified 1002.5346 0.53457439 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B4DHD2;B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 1 3 0 1 39.419 39.473 3 0.0036165 9371 20230619_1882_Aki_TMTPro18x_K_F3 92.051 22.24 90596 44274 56803 75800 56161 73488 65698 84247 128890 107200 115460 169900 156370 156230 61274 242260 253420 235680 83303 40882 60624 73872 58960 74656 67654 85918 127150 109080 121080 169260 154210 165980 75576 241090 240490 223990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51468000 26535 3981 24920 49839 40188 40188 1 9606 Homo sapiens 0.03340848718005418 TERDTPGHGSGWAETPR Unmodified 1852.8452 0.84523728 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 1 6 0 1 31.633 31.666 4 0.023645 6408 20230619_1886_Aki_TMTPro18x_K_F6 62.658 51.797 9326.4 4768.8 9494.4 8819.1 9061.2 10279 8880.8 10913 11257 9780.3 10384 10651 12899 11681 10392 10050 14702 11015 8604.9 4407 9619.1 8589.8 9447.2 10289 9047.2 11067 11299 9975.1 10805 10808 12975 11927 10844 10184 13999 10465 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4257500 26536 3309 24921 49840 40189 40189 1 9606 Homo sapiens -0.04707153154754451 TEREQFVEFR Unmodified 1339.6521 0.65206377 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-2;O43852-4;A0A024R755;B3KNG6;O43852-15;H0Y875;B3KQK3 CALU Calumenin yes no 0 0 1 3.5 0.5 1 1 41.377 41.428 3 0.00011463 10206 20230619_1882_Aki_TMTPro18x_K_F3 119.76 62.269 471750 420830 421210 449610 496930 498810 540130 558730 569580 548510 602380 519450 527330 442440 534920 565090 552690 491630 436070 385460 433380 452630 511000 502320 543040 566210 579780 553880 612720 526440 540870 465350 544950 561760 528210 467960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 626890000 26537 2386 24922 49841;49842 40190;40191;40192 40190 3 9606 Homo sapiens -0.004176184132120397 TERPSGPGGEMGVCEK Unmodified 1689.7451 0.74505423 1032 A0A0G2JIZ4;Q59EC6;A0A1U9X8R9;P14373-2;P14373 TRIM27 Zinc finger protein RFP yes no 0 0 1 4 0 1 38.408 38.451 3 0.030697 8924 20230619_1883_Aki_TMTPro18x_K_F4 51.466 31.04 18337 14919 18746 19634 19363 17714 21825 21059 21961 24569 22197 19589 24203 22875 15889 22212 25204 21653 16958 13697 19021 19419 20094 18145 21869 21377 22396 24488 22824 20225 24267 23449 16850 22286 24001 20585 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9932000 26538 1032 24923 49843 40193 40193 1 9606 Homo sapiens -0.07222849804429643 TERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTR Oxidation (M) 3588.7115 0.7114525 1678 Q13347;A0A7I2YQF8;Q5U0F4;Q53HU7;A0A7I2V613;A0A7I2V607;A0A7I2V3N2;A0A7I2V2M3;A0A7I2V640;A0A7I2YQI2;A0A7I2V3U3;A0A7I2V5V8;A0A7I2YQU2;A0A7P0MRT9;A0A7I2V685;A0A7I2YQI6;Q5TFK1;A0A7I2YQC8;A0A7I2YQT9;A0A7I2V4C2 EIF3I Eukaryotic translation initiation factor 3 subunit I yes no 0 1 1 5.5 0.5 1 1 46.876 46.956 4 5.0188E-10 12430 20230619_1885_Aki_TMTPro18x_K_F5 106.77 104.12 15713 11579 15355 17929 14976 16955 16465 17210 15178 17750 19922 19118 17920 14579 17799 22101 21675 19263 14517 10655 15638 17562 15623 17216 16487 17582 15732 17940 20127 19206 18345 15583 18338 21916 20684 18335 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162030000 26539 1678 24924 49844;49845 40194;40195 40194 1095 2 9606 Homo sapiens 0.020645229550609656 TERPVNSAALSPNYDHVVLGGGQEAMDVTTTSTR Unmodified 3572.7165 0.71653788 1678 Q13347;A0A7I2YQF8;Q5U0F4;Q53HU7;A0A7I2V613;A0A7I2V607;A0A7I2V3N2;A0A7I2V2M3;A0A7I2V640;A0A7I2YQI2;A0A7I2V3U3;A0A7I2V5V8;A0A7I2YQU2;A0A7P0MRT9;A0A7I2V685;A0A7I2YQI6;Q5TFK1;A0A7I2YQC8;A0A7I2YQT9;A0A7I2V4C2 EIF3I Eukaryotic translation initiation factor 3 subunit I yes no 0 0 1 6 0 1 50.111 50.188 4 1.0299999999999999E-40 13984 20230619_1886_Aki_TMTPro18x_K_F6 205.72 199 52082 40746 46301 37435 40693 52416 44538 46664 37159 67604 53830 52384 61984 45229 54060 74431 63736 64071 48101 37294 47380 38326 42867 51747 44505 48588 39100 66674 54798 53640 62579 48472 55760 73677 60891 60964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129290000 26540 1678 24924 49846 40196 40196 1 9606 Homo sapiens 0.03308826817647059 TESGYGSESSLR Unmodified 1271.563 0.56297399 624 A0A2R8YFI2;A0A2R8YEA4;A0A2R8Y5H3;A0A2R8Y7Q9;A0A2R8YEK8;A0A2R8YE18;A0A2R8Y5S9;A0A024RAJ5;A0A2R8Y7C5;Q9Y5P4-2;Q9Y5P4;Q9Y5P4-3;A0A2U3TZL3;A0A2R8YCI0 COL4A3BP Collagen type IV alpha-3-binding protein yes no 0 0 0 2.5 0.5 1 1 35.829 35.886 2 5.5387E-32 8008 20230619_1881_Aki_TMTPro18x_K_F2 289.18 232.92 56213 37708 45603 37513 46486 46352 40398 36825 50233 66900 88184 85676 77300 73615 68647 81673 100710 91786 51839 34558 47152 38054 48061 46029 41435 39096 52158 66557 88176 85725 78897 76724 71794 82475 95987 87105 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63514000 26541 624 24925 49847;49848 40197 40197 1 9606 Homo sapiens -0.061944981633587304 TESGYGSESSLRR Unmodified 1427.6641 0.66408501 624 A0A2R8YFI2;A0A2R8YEA4;A0A2R8Y5H3;A0A2R8Y7Q9;A0A2R8YEK8;A0A2R8YE18;A0A2R8Y5S9;A0A024RAJ5;A0A2R8Y7C5;Q9Y5P4-2;Q9Y5P4;Q9Y5P4-3;A0A2U3TZL3;A0A2R8YCI0 COL4A3BP Collagen type IV alpha-3-binding protein yes no 0 0 1 4 0 1 31.426 31.49 3 4.3788E-16 6115 20230619_1883_Aki_TMTPro18x_K_F4 213.73 181.74 40719 33553 39662 34814 42692 39154 37431 35819 41733 48617 59621 57937 55538 50369 49329 54188 76137 63377 37645 30734 40376 35143 43907 39231 38210 37173 43005 48723 60130 58139 56561 52403 51769 54895 72500 60145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54521000 26542 624 24926 49849 40198 40198 1 9606 Homo sapiens -0.032640464606629394 TESNQEVANPEHYIK Unmodified 1757.822 0.82204222 3393 P06730;P06730-2;Q32Q75;X5D7E3;D6RBW1;P06730-3;B7Z2T1;H0Y8J7;D6RFJ3 EIF4E Eukaryotic translation initiation factor 4E yes no 0 0 0 4 0.816 1 1 1 44.428 44.494 3 4.8504E-14 11444 20230619_1883_Aki_TMTPro18x_K_F4 178.01 149.38 274840 195510 202480 249700 199520 278000 220880 243340 357480 366350 370350 464150 533900 462300 255390 605790 566260 615210 253380 179540 211990 247990 208990 278030 225740 254270 357200 366790 386730 466760 526880 484440 283690 605840 539130 584050 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 671040000 26543 3393 24927 49850;49851;49852 40199;40200;40201;40202 40201 4 9606 Homo sapiens -0.02655591992106565 TESPATAAETASEELDNR Unmodified 1890.8443 0.8442938 4593 Q9NTJ3;Q9NTJ3-2;Q6NSG3;Q58F29;Q6P169;C9JR83;C9JWF0;C9IYK2;C9JJ64 SMC4 Structural maintenance of chromosomes protein 4 yes no 0 0 0 1 0 1 50.274 50.274 3 2.4883E-48 14446 20230619_1880_Aki_TMTPro18x_K_F1 214.41 189.48 31156 27469 32007 27537 28604 30332 30187 29922 36935 32233 37421 27211 38870 32546 34721 37215 35356 34973 28829 25147 32360 27871 30021 30472 30569 30655 37247 32321 38362 28087 39420 33651 35428 37193 33820 33242 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78232000 26544 4593 24928 49853 40203;40204 40204 2 9606 Homo sapiens -0.0654945710496122 TESPVLTSSCR Unmodified 1235.5816 0.58160094 1311 A0A1W2PNX8;Q9H3U1-2;Q9H3U1 UNC45A Protein unc-45 homolog A yes no 0 0 0 4.5 0.5 1 1 37.588 37.632 2 1.6754000000000002E-33 8562 20230619_1885_Aki_TMTPro18x_K_F5 259.82 203.79 25954 20398 18321 23495 23740 26791 28773 25082 32910 29828 32493 27045 29721 24955 21733 38241 38400 30139 23935 18705 19365 23513 24391 26805 28825 25876 33259 29818 33185 27553 30061 26505 23249 37710 36523 28742 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31983000 26545 1311 24929 49854;49855 40205;40206 40206 2 9606 Homo sapiens -0.0267665979317826 TESSGGWQNR Unmodified 1120.4897 0.48974946 4652 Q9UBG0 MRC2 C-type mannose receptor 2 yes yes 0 0 0 3.5 0.5 1 1 32.765 32.822 2 0.00043467 6664 20230619_1883_Aki_TMTPro18x_K_F4 125.82 125.82 13602 9898.8 14150 9640 22365 26711 18620 20407 24118 16463 24714 27564 26145 20879 24297 8799.3 30569 23667 12572 9067 14429 9990 22504 25563 19161 21155 24251 17203 25409 27215 26543 21141 24992 9924.6 29139 22347 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10353000 26546 4652 24930 49856;49857 40207;40208 40208 2 9606 Homo sapiens -0.06567582095340185 TESTPITAVK Unmodified 1045.5655 0.56554017 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 5.5 0.5 1 1 44.733 44.817 3 0.0030528 11585 20230619_1886_Aki_TMTPro18x_K_F6 76.85 59.91 91673 71043 83354 89302 91100 100970 86129 84208 120160 107670 111940 112640 120360 103710 95675 126450 127690 122120 84676 65207 85507 88822 93970 100840 88187 87828 120150 107770 115570 113850 121440 108470 99657 126370 121820 116060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 303180000 26547 4753 24931 49858;49859 40209 40209 1 9606 Homo sapiens 0.04458002032220065 TESYRDFIYQNPHIFK Unmodified 2057.0007 0.0006752871 2611 B4DWB1;O60678;B4DP44;Q8WUV3;O60678-2 PRMT3 Protein arginine N-methyltransferase 3 yes no 0 0 1 2 0 1 53.895 53.924 4 1.0279E-05 16166 20230619_1881_Aki_TMTPro18x_K_F2 94.544 72.07 56511 52712 55997 53421 50314 52978 51683 51925 52363 63010 67305 55612 67463 54255 70913 60971 57661 59576 52296 48253 56813 53931 52722 53625 52101 53418 53950 62844 68299 56780 68959 56389 71263 61124 55311 56593 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65024000 26548 2611 24932 49860 40210 40210 1 9606 Homo sapiens 0.014454976468186942 TETISFGSVSPGGVK Unmodified 1464.746 0.74602373 931 Q9Y2J2;Q9Y2J2-2;A0A0A0MSA4;A0A0A0MRA8;A8K968;B3KY28;Q9Y2J2-4;B3KT50;B7Z2D7;B7Z2G3;B7Z8M8;B7Z338;A0A0J9YY18;J3QS83 EPB41L3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 0 0 0 8 0 1 54.57 54.637 3 5.4805E-06 15549 20230619_1888_Aki_TMTPro18x_K_F8 121.76 96.439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26549 931 24933 49861 40211 40211 1 9606 Homo sapiens 0.032240558983858136 TETKPSVTEK Unmodified 1118.5819 0.58191851 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 1 6 0 1 38.268 38.348 3 0.00019524 8844 20230619_1886_Aki_TMTPro18x_K_F6 121.96 97.621 285760 132440 353360 369300 507970 519030 356620 468950 397120 294370 544550 615900 411150 438140 595590 187940 553740 485000 264030 123400 355630 354920 510880 511860 370120 477630 407480 316600 546760 604000 433050 444360 597740 210970 529740 457760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 236940000 26550 630 24934 49862 40212;40213 40213 2 9606 Homo sapiens 0.027370831983489552 TETPPPLASLNVSK Unmodified 1452.7824 0.78240924 3164 K7ELG9;Q3MHD2;Q3MHD2-2 LSM12 Protein LSM12 homolog yes no 0 0 0 8 0 1 55.029 55.096 3 1.5291E-05 15733 20230619_1888_Aki_TMTPro18x_K_F8 115.12 96.283 103500 67725 79421 84215 78794 88508 87319 92495 120160 78601 76900 80032 84608 67450 76672 88252 75314 77501 95402 62200 82696 83766 82259 89256 88550 93837 118710 80298 81288 80779 85716 71094 78097 87721 72088 73717 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82753000 26551 3164 24935 49863 40214 40214 1 9606 Homo sapiens 0.07412932795114102 TETSETEITTTEIIK Unmodified 1694.8462 0.84619128 1361 E7ETD6;E9PE19;A0A2R8Y7Q1;J3QQK4;Q12830-4;Q12830-2;Q12830;F5GXF5 BPTF Nucleosome-remodeling factor subunit BPTF yes no 0 0 0 1.5 0.5 1 1 52.904 52.921 3 1.1418E-05 15756 20230619_1881_Aki_TMTPro18x_K_F2 112.15 92.576 21307 15158 18703 18411 18028 26932 19525 20492 23131 22237 24491 24075 24099 20985 21971 26766 25374 27372 19666 13912 19211 18435 18888 26420 19720 21419 23412 22443 25042 24263 24513 22053 22594 26824 24259 25985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71565000 26552 1361 24936 49864;49865 40215 40215 1 9606 Homo sapiens 0.02656203650894895 TETVEEPMEEEEAAKEEK Unmodified 2106.9151 0.91507549 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;A0A7P0TBC2;Q96GW1 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 1 1 0 1 48.623 48.623 3 2.7068E-09 13792 20230619_1880_Aki_TMTPro18x_K_F1 93.495 77.73 21050 14326 16235 20320 17619 34275 19013 21479 39301 27903 25249 49424 45569 44566 27677 56956 52348 92069 19407 13174 16956 20185 18405 33257 19703 22995 38320 28558 27596 48992 45095 46807 29995 58882 50123 86930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29169000 26553 3452 24937 49866 40216 40216 1 9606 Homo sapiens -0.09410544902311813 TETVTSFR Unmodified 939.46616 0.46616048 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5 0.816 1 1 1 40.202 40.276 2 7.6441E-05 9626 20230619_1885_Aki_TMTPro18x_K_F5 183.74 153.02 605100 507710 539910 620820 644430 669230 689970 595440 826520 768310 813590 805980 807640 691470 684910 858200 932780 790230 559110 465730 555940 618200 662300 671580 696920 618380 833660 768630 834890 812690 818950 725700 713200 855480 889100 751810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 917870000 26554 3758 24938 49867;49868;49869 40217;40218 40217 2 9606 Homo sapiens -0.005993958618546458 TETVVDDWDEEFDRGK Unmodified 1939.8436 0.84356552 542 A0A024R8V6;Q9P275;B3KMW2;K7EIH0;K7EKN3;K7EKL7 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 0 0 1 2 0 1 57.689 57.704 3 0.00060703 17696 20230619_1881_Aki_TMTPro18x_K_F2 80.411 70.215 25122 25303 23759 26592 24279 29623 24085 26717 27194 27900 26055 27030 29366 21552 33630 35025 29126 27283 23252 23164 24274 26796 25202 29662 24407 27520 27502 28102 26954 27309 30043 23128 33881 34543 27898 26002 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26517000 26555 542 24939 49870 40219 40219 1 9606 Homo sapiens -0.08876251754054465 TEVMALVPPADCR Unmodified 1457.7007 0.70067022 3889 V9HWB2;Q14353;A0A1W2PR36 HEL-S-20;GAMT Guanidinoacetate N-methyltransferase yes no 0 0 0 5.67 0.471 1 2 53.923 53.998 2;3 9.7396E-05 15458 20230619_1885_Aki_TMTPro18x_K_F5 85.457 75.453 65617 57654 64067 61610 60596 66715 69697 66771 70958 80352 83182 76256 82725 76677 82510 84349 92681 93021 60690 52811 65144 62004 63449 67105 69809 68573 72746 80345 84720 77638 84481 79483 84475 85124 88580 88259 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122640000 26556 3889 24940 49871;49872;49873 40220;40221 40220 2 9606 Homo sapiens -0.00987209159984559 TEVNSGFFYK Unmodified 1190.5608 0.56078914 765;2549;4294 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2;J3KRI6;B4DN39;Q92526;Q92526-2 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 no no 0 0 0 5.33 3.09 1 1 1 54.145 54.213 2 9.6579E-07 15429 20230619_1887_Aki_TMTPro18x_K_F7 205.83 171.74 135280 111280 109370 135290 106510 123670 131340 131600 142390 167570 165660 162100 177680 146870 144100 187200 174510 171000 124890 102080 113380 134490 111640 126120 131360 134870 145480 167200 169340 164330 179350 154140 149040 186440 166650 162600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 798430000 26557 765;2549;4294 24941 49874;49875;49876 40222;40223 40223 2 9606 Homo sapiens -0.026868821105381357 TEVNYTQLVDLHAR Unmodified 1657.8424 0.84238373 3155 K7ERP4;K7EJ20;P36969-2;P36969;K7EKX7;R4GNE4;K7ENB4;A0A087X247 GPX4 Glutathione peroxidase;Phospholipid hydroperoxide glutathione peroxidase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 50.752 50.829 3 4.0054E-70 14314 20230619_1886_Aki_TMTPro18x_K_F6 284.51 253.6 137140 107360 119450 128440 138240 174160 149650 149090 207710 158240 146020 172750 202060 171280 167530 197690 190630 215380 126640 98490 123190 128560 142730 172010 151940 154250 205810 160040 155340 174630 202860 178160 172400 199130 182340 204290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230870000 26558 3155 24942 49877;49878 40224 40224 1 9606 Homo sapiens 0.03977623458376911 TEVPLAENQR Unmodified 1155.5884 0.58840088 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;H0Y9Y3;Q9UMS6;Q9UMS6-3 SYNPO2 Synaptopodin-2 yes no 0 0 0 2.5 0.5 1 1 39.077 39.137 2 0.0050648 9412 20230619_1881_Aki_TMTPro18x_K_F2 90.15 59.482 65354 51258 81865 75151 98329 100380 96858 100290 119910 97958 116350 109250 117460 103440 111740 107510 147860 121430 60541 47125 81996 74261 100710 99577 98462 102360 120630 99518 119540 110240 119640 107110 115680 108770 140940 115290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89548000 26559 4686 24943 49879;49880 40225 40225 1 9606 Homo sapiens 0.01683021149688102 TEVPPLLLILDR Unmodified 1377.8232 0.82315184 1281 Q9NRW7-2;A0A8V8TMG7;A0A2R8YD95;A0A8V8TNE7;A0A8V8TNR0;A0A8V8TNQ5;A0A8V8TMH2;A0A8V8TM05;A0A1B0GXI6;A0A8V8TLW3;B7Z5D4;A0A8V8TNG0;A0A8V8TNB6;A0A8V8TMF8;A0A2R8YE10;A0A8V8TMD1;A0A8V8TNM6;Q9NRW7;A0A8V8TLX8;A0AR27;A0A8V8TM00;B7Z5E4;A0A8V8TM10;A0A2R8YF01;A0A8V8TMG3;A0A8V8TMC6;B7Z360;A0A8V8TLU0;B7Z1J7;A0A8V8TNF0;A0A2R8YEX8;Q5T4Q0;A0A8V8TNF5;A0A8V8TLZ5;B7Z7G7 VPS45 Vacuolar protein sorting-associated protein 45 yes no 0 0 0 8 0 1 65.427 65.446 2 5.6476E-12 20117 20230619_1888_Aki_TMTPro18x_K_F8 172.21 141.56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26560 1281 24944 49881 40226 40226 1 9606 Homo sapiens 0.14935318905440909 TEVSLTLTNK Unmodified 1104.6027 0.60265396 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 7.5 0.5 1 1 50.951 51.028 2 0.00012545 14061 20230619_1887_Aki_TMTPro18x_K_F7 163.88 133.32 131820 102980 123820 143420 122490 168380 144840 145110 179940 171900 164940 193920 194310 172870 160480 203010 200760 225820 121790 94620 126590 141760 128270 167710 145820 150580 180770 173010 171390 195070 195880 180610 166250 204660 191870 214150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 214650000 26561 707 24945 49882;49883 40227;40228 40227 2 9606 Homo sapiens 0.054536735779947776 TEVTGDHIPTPQDLPQR Unmodified 1902.9436 0.94355434 358 H3BQ52;A0A024R5U3;H3BMD8;P56211;P56211-2 ARPP19;ARPP-19 cAMP-regulated phosphoprotein 19 yes no 0 0 0 5 0 1 45.596 45.673 3 0.056094 11914 20230619_1885_Aki_TMTPro18x_K_F5 50.831 36.925 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26562 358 24946 49884 40229 40229 1 9606 Homo sapiens 0.028200303704124963 TEWETAAPAVAETPDIK Acetyl (Protein N-term) 1869.8996 0.89962384 300 M0R0F0;A0A024R4Q8;M0R0R2;P46782;Q53G25;M0QZN2 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 1 0 0 2.5 1.12 1 1 1 1 62.558 62.569 2 3.0743E-23 19482 20230619_1882_Aki_TMTPro18x_K_F3 122.33 111.5 310370 250820 284560 294470 282600 348960 325630 336910 361080 313470 307860 300600 364320 309440 346980 381150 365010 406350 286780 230020 291300 294580 295220 348380 326960 344320 363680 317800 320870 306270 369260 322790 354330 383160 349350 385540 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1253500000 26563 300 24947 49885;49886;49887;49888 40230;40231;40232 40232 3 9606 Homo sapiens -0.0005299884655869391 TEWLDGK Unmodified 847.40758 0.40758296 2036;3735 P62937;A8K486;V9HWF5;B2RE56;B4DM82;Q71V99;A0A0B4J2A2;A0A075B767;A0A0H2UH34;P0DN26;F5H284;Q9Y536;A0A075B759;P0DN37;B2RXF3;P62937-2 PPIA;HEL-S-69p;PPIAL4C;PPIAL4D;PPIAL4A;PPIAL4E Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4D;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C no no 0 0 0 3.89 1.52 1 1 1 2 3 1 51.616 51.665 2;3 0.0010407 13833 20230619_1885_Aki_TMTPro18x_K_F5 130.04 78.252 3502900 2999900 3109900 2900700 3118400 3594500 3388300 3523300 4173400 4121800 4368900 4266000 3947500 3568600 3274600 4388400 3982700 3940200 3236900 2745900 3190700 2949600 3249000 3582000 3426000 3618900 4214700 4137900 4452900 4300900 4012000 3745600 3387100 4368700 3803500 3747300 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 21227000000 26564 2036;3735 24948 49889;49890;49891;49892;49893;49894;49895;49896;49897 40233;40234;40235;40236;40237;40238 40237 6 9606 Homo sapiens -0.022224524363309683 TEYDAVAEK Unmodified 1024.4713 0.47130543 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2;B3KVJ5 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 2 0 1 43.629 43.712 2 0.00022474 11541 20230619_1881_Aki_TMTPro18x_K_F2 132.84 80.846 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26565 4593 24949 49898 40239 40239 1 9606 Homo sapiens -0.03995136789922071 TEYLSNADER Unmodified 1196.5309 0.53094558 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2 0.816 1 1 1 39.421 39.463 2 2.9195E-26 9537 20230619_1881_Aki_TMTPro18x_K_F2 276.75 252.72 216360 175610 184150 209240 224720 242530 234370 236290 308590 272090 307080 314730 304130 264550 272050 322900 367010 314980 199800 161060 190510 208990 230630 242620 238000 242770 309980 274440 315010 315910 309120 277550 282700 322970 349880 299450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 455100000 26566 3881 24950 49899;49900;49901 40240;40241 40241 2 9606 Homo sapiens -0.05945865846547349 TEYTVAVQTASK Unmodified 1296.6561 0.65614609 42 A0A024QZK4;Q96FC7;Q96FC7-2 PHYHIPL Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 0 7 0 1 46.727 46.815 3 5.979E-06 12108 20230619_1887_Aki_TMTPro18x_K_F7 139.76 119.66 298490 265260 271970 242390 195210 191680 275280 265510 300700 298440 403540 317660 318000 272570 335970 340750 345460 295960 275950 242660 277110 246430 210850 199680 273880 267100 308650 300340 404880 320500 328070 286150 341870 338860 330100 281760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 322130000 26567 42 24951 49902 40242 40242 1 9606 Homo sapiens 0.019684262898636007 TFAPEEISAMVLTK Oxidation (M) 1551.7854 0.7854457 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 1 0 7 0 1 61.467 61.506 3 4.0042E-05 18452 20230619_1887_Aki_TMTPro18x_K_F7 98.865 80.948 126260 77304 88075 115930 105730 118200 139000 112520 126030 123840 152210 121850 118510 83459 130720 152240 114820 153090 116270 71168 93110 113850 109360 119170 137730 115740 130070 124460 153290 122680 122450 91084 131980 151830 110270 145260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 434750000 26568 3429 24952 49903 40243 40243 2051 1 9606 Homo sapiens 0.03162439857624122 TFAPEEISAMVLTK Unmodified 1535.7905 0.79053108 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 8 0 1 63.519 63.541 3 9.6916E-08 19334 20230619_1888_Aki_TMTPro18x_K_F8 143.98 123.59 1049200 770950 1115200 1261500 976960 1225200 1228400 1135200 1493500 1606400 1186100 1482500 1848700 1327500 1609000 1895900 1779000 2070100 970080 709940 1126400 1232300 1033700 1238700 1232000 1179000 1496400 1594600 1262700 1504500 1853100 1406300 1651300 1904600 1702500 1963300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2029899999.9999998 26569 3429 24952 49904 40244 40244 1 9606 Homo sapiens 0.04406743720232953 TFAVDETSVSGYIYHK Unmodified 1815.8679 0.86792978 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A059XAL2;A0A059XBJ1;A0A059X4U2;A0A059XAJ5;A0A059XG67 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 7.5 0.5 1 1 56.339 56.397 3 2.811E-26 16324 20230619_1887_Aki_TMTPro18x_K_F7 238.02 218.47 139040 110520 141340 143360 125610 161700 147350 142830 162560 169270 162520 158650 173340 145220 153260 196170 175010 190250 128560 101460 143190 142310 132480 161620 147820 147940 164820 169340 167200 161150 175620 152950 157640 195840 167340 180700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 303530000 26570 462 24953 49905;49906 40245;40246 40245 2 9606 Homo sapiens -0.0073694680986591266 TFCNCFVGQAGQK Unmodified 1515.6599 0.65986803 4702 Q9Y263 PLAA Phospholipase A-2-activating protein yes yes 0 0 0 2.5 0.5 1 1 50.483 50.546 3 9.1729E-05 14378 20230619_1882_Aki_TMTPro18x_K_F3 103.14 88.344 97442 77360 98072 92779 94102 107550 105060 96021 135740 100670 88215 97302 111220 78590 98229 113790 113120 108890 90090 70964 99486 92648 98426 107370 106210 99040 134600 101470 93815 98291 112100 83621 101020 113460 108060 103490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126350000 26571 4702 24954 49907;49908 40247 40247 1 9606 Homo sapiens -0.07733550479588303 TFCPAHK Unmodified 859.40106 0.4010578 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 3.67 3.09 1 1 1 36.273 36.288 3 0.0031206 8207 20230619_1881_Aki_TMTPro18x_K_F2 117.17 83.091 769430 411490 833510 781740 738750 780450 778880 758370 798700 855850 1140200 1071000 1037500 874540 902240 583600 1228400 945880 710420 380330 839500 758630 775350 788330 784340 779230 825900 866040 1148700 1070100 1055600 893690 935850 612680 1170300 895600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 780230000 26572 3606 24955 49909;49910;49911 40248;40249;40250 40249 3 9606 Homo sapiens -0.034266688686898306 TFCQLILDPIFK Unmodified 1493.7952 0.79522253 3447 P13639;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 0 0 3.5 1.12 1 1 1 1 65.15 65.174 3 2.6741E-06 20615 20230619_1882_Aki_TMTPro18x_K_F3 143.42 123.33 587560 445720 527060 521200 381540 570360 548560 563000 656240 829480 579010 661470 1052700 845200 443100 1190700 1066600 1164700 542590 408850 538410 521000 413780 572580 546900 582550 661000 818970 618250 685800 1030800 884550 499840 1187000 1015200 1106100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1606499999.9999998 26573 3447 24956 49912;49913;49914;49915 40251;40252 40251 2 9606 Homo sapiens 0.06807672653644659 TFDEIASGFR Unmodified 1141.5404 0.54038805 2426 B3KVN0;B4DKW1;Q59GX2;P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 yes no 0 0 0 5.5 0.5 1 1 57.106 57.171 2 1.8539E-09 16745 20230619_1885_Aki_TMTPro18x_K_F5 203.19 181.66 74191 56200 64847 70554 62021 78645 70315 66682 79922 89630 110240 120570 93792 101610 124720 96328 123390 136200 68499 51587 66652 70166 64982 78617 70744 69597 82074 90288 111090 120280 97853 105100 126050 99212 118160 128900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 455020000 26574 2426 24957 49916;49917 40253 40253 1 9606 Homo sapiens -0.02472052770326627 TFDHYCEYR Unmodified 1289.5135 0.51352137 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3.5 0.5 1 1 38.747 38.795 3 3.2488E-06 9100 20230619_1882_Aki_TMTPro18x_K_F3 170.5 164.78 208740 141460 189730 203670 211790 218420 262930 257880 306450 264600 281200 293620 288890 259620 247010 318010 310340 340360 192670 130100 194770 200760 219560 220610 263390 260880 308570 267970 290090 295660 292780 271970 255820 319660 296520 322930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 415440000 26575 3881 24958 49918;49919 40254;40255 40254 2 9606 Homo sapiens -0.11965484653183012 TFDPYIIIR Unmodified 1136.623 0.62299547 3863 Q13601;Q13601-2;B4DMS5 KRR1 KRR1 small subunit processome component homolog yes no 0 0 0 1 0 1 61.245 61.245 2 3.8536E-05 18968 20230619_1880_Aki_TMTPro18x_K_F1 131.03 92.225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26576 3863 24959 49920 40256 40256 1 9606 Homo sapiens 0.06014889028483594 TFDQLTPDESK Unmodified 1279.5932 0.59321148 3928 V9HW95;Q15293 HEL-S-84;RCN1 Reticulocalbin-1 yes no 0 0 0 3 0.816 1 1 1 50.293 50.346 3 0.0012736 14290 20230619_1882_Aki_TMTPro18x_K_F3 88.187 66.314 217910 182320 204590 238820 303820 337890 325690 266290 337060 290150 293930 289690 303280 240200 290830 294430 285580 305260 201420 167360 210720 237690 308290 332460 327150 277720 340950 292110 304040 292430 308510 252390 295690 295610 273430 289750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 430760000 26577 3928 24960 49921;49922;49923 40257 40257 1 9606 Homo sapiens -0.03540139498181816 TFDQLTPEESK Unmodified 1293.6089 0.60886155 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-2;O43852-4;A0A024R755;B3KNG6;O43852-10;O43852-6;O43852-5;O43852-13;O43852-9;O43852-11;O43852-14;O43852-8;O43852-7;O43852-12 CALU Calumenin yes no 0 0 0 3 0.816 1 1 1 50.16 50.214 3 5.1615E-05 14060 20230619_1883_Aki_TMTPro18x_K_F4 110.39 95.511 553430 403820 505630 500660 519300 628060 613460 577580 682020 694620 743690 751300 734880 669040 695160 796630 814810 792640 511030 370680 517910 499380 541400 624120 615180 596660 693420 697510 759820 757420 748810 699350 714740 798010 778290 752980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1584299999.9999998 26578 2386 24961 49924;49925;49926 40258;40259;40260 40260 3 9606 Homo sapiens -0.02619852981160875 TFDSIVMDPK Oxidation (M) 1167.5482 0.54817555 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 1 0 4.5 0.5 1 1 53.043 53.089 3 0.00036802 15071 20230619_1885_Aki_TMTPro18x_K_F5 103.26 79.531 90587 66143 77987 87216 96458 107750 107760 99687 118150 96431 109330 104750 107620 92855 111820 127150 106050 117550 83610 60754 80621 86593 99071 107200 108270 102320 119340 97934 112510 105660 110100 97961 113410 126640 101610 111710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225740000 26579 909 24962 49927;49928 40261 40261 519 1 9606 Homo sapiens -0.028896615650864987 TFDSIVMDPK Unmodified 1151.5533 0.55326092 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 5.5 0.5 1 1 57.394 57.459 3 0.00013486 16862 20230619_1885_Aki_TMTPro18x_K_F5 123.63 97.027 165510 128670 145990 161090 143740 181070 174450 183100 192480 195170 201600 192300 212660 179950 214060 234070 224400 224340 152850 118090 150020 160290 150540 181560 174710 187190 195460 196500 206880 195060 216760 188900 218320 233740 214600 213180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 178940000 26580 909 24962 49929;49930 40262;40263 40262 2 9606 Homo sapiens -0.016453577024549304 TFDTNGDGTIDFR Unmodified 1457.6423 0.64228694 3561 Q6FGY1;P37235;Q68CP5;E9PC71 HPCAL1;DKFZp781K1922 Hippocalcin-like protein 1 yes no 0 0 0 3 0 1 52.773 52.832 2 3.4054000000000003E-45 15423 20230619_1882_Aki_TMTPro18x_K_F3 340.66 309.24 30700 24182 29453 32044 22426 33212 34012 37114 41347 45125 41455 54859 55663 44766 31327 60065 57589 68069 28371 22206 29948 31731 24238 33557 33859 37852 41744 45454 43208 54879 55213 47339 33894 60464 54919 64529 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22111000 26581 3561 24963 49931 40264 40264 1 9606 Homo sapiens -0.06822851209221881 TFEDFVR Unmodified 912.43413 0.43413207 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 4 0 1 52.111 52.135 2 0.0029973 14948 20230619_1883_Aki_TMTPro18x_K_F4 157.99 111.22 159350 150490 169420 152700 113060 129110 138140 120030 143490 182200 172300 155360 207940 150120 156180 220850 188380 180490 147560 137760 170290 153860 122570 132260 138120 125020 147240 179950 176820 158880 208460 158860 161860 218330 179870 171880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140720000 26582 3833 24964 49932 40265 40265 1 9606 Homo sapiens -0.025587635449937807 TFEDNIRK Unmodified 1021.5193 0.51925868 4045 Q8IXG0;Q69YP1;Q5JY65;Q9BZJ0-2;Q9BZJ0-3;Q9BZJ0 crn;DKFZp762M013;CRNKL1 Crooked neck-like protein 1 yes no 0 0 1 6 0 1 40.864 40.956 3 0.0026376 9933 20230619_1886_Aki_TMTPro18x_K_F6 114.64 79.02 138210 104390 115080 127610 159440 170160 155430 152790 203930 127550 153320 145480 158060 129680 132500 168710 174640 145350 127560 95800 119580 127510 162080 168440 158360 156600 202730 130980 159810 146490 159990 136310 137700 167500 166480 138410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83246000 26583 4045 24965 49933 40266 40266 1 9606 Homo sapiens 0.009359819208043518 TFEGHDASVLK Unmodified 1202.5932 0.5931519 3820 Q12788;A0JLS5;J3KNP2 TBL3 Transducin beta-like protein 3 yes no 0 0 0 4.5 0.5 1 1 43.676 43.738 3 6.8769E-05 11099 20230619_1885_Aki_TMTPro18x_K_F5 109.24 57.968 309390 230270 388540 334700 435370 440060 391440 421820 445020 288300 305070 239800 286470 234970 297900 270090 310730 274530 286530 211730 388420 330840 446840 436510 399010 428410 444350 297330 318410 245830 293520 244510 303260 271210 296930 260830 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 189490000 26584 3820 24966 49934;49935 40267;40268;40269 40268 3 9606 Homo sapiens -4.0947075376607245E-05 TFEGIDPK Unmodified 905.44945 0.44944778 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q5SX87;Q5SX86 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 0 4.5 0.5 1 1 49.412 49.467 2 0.00040637 13538 20230619_1885_Aki_TMTPro18x_K_F5 164.72 103.94 577090 438770 487940 520000 590680 614450 598630 560390 687130 676720 718930 704930 772140 581280 615090 775450 762170 698950 532700 402510 504790 519750 605640 613120 605770 579400 696420 678580 738180 710350 778480 614160 637200 771400 727380 664900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 894970000 26585 2533 24967 49936;49937 40270;40271 40271 2 9606 Homo sapiens -0.007058967478087652 TFEGNLTTK Unmodified 1009.508 0.50802529 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q6JH03;Q6JH02 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 7 0 1 46.761 46.849 3 0.043341 12120 20230619_1887_Aki_TMTPro18x_K_F7 51.927 34.601 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26586 1863 24968 49938 40272 40272 1 9606 Homo sapiens 0.003651598266515066 TFEGVDPQTTSMR Oxidation (M) 1483.6613 0.66130782 1080 A0A0S2Z3X8;P31150;B4DHX4;B4DH24 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 1 0 3 0 1 42.822 42.888 2 0.077126 10851 20230619_1882_Aki_TMTPro18x_K_F3 51.927 43.887 59428 52875 58209 71102 61299 60704 63294 67720 71230 68362 80274 79277 65937 62080 71096 78861 74375 90905 54972 48541 59345 70154 63432 62346 63981 68734 72447 69366 81311 79426 68035 65477 72439 79623 71244 86154 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84057000 26587 1080 24969 49939 40273 40273 647 1 9606 Homo sapiens -0.061176379098469624 TFEGVDPQTTSMR Unmodified 1467.6664 0.6663932 1080 A0A0S2Z3X8;P31150;B4DHX4;B4DH24 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 3.5 0.5 1 1 46.696 46.756 2 2.0713E-07 12455 20230619_1883_Aki_TMTPro18x_K_F4 190.66 178.04 83352 66057 77534 101250 64298 76353 78946 80823 82715 94660 103030 103660 101450 84251 99091 104240 104320 107820 77014 60760 79190 98968 68277 79159 78923 82692 84895 95153 104700 104170 103450 88614 101120 104620 99790 102360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215000000 26588 1080 24969 49940;49941 40274 40274 1 9606 Homo sapiens -0.048733340472381315 TFEHVTSEIGAEEAEEVGVEHLLR Unmodified 2680.298 0.2980391 2310 B2RD27;P51665;B4DXI8;H3BNT7;H3BTM8 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes no 0 0 0 3 0 1 60.33 60.359 4 5.0506E-05 18596 20230619_1882_Aki_TMTPro18x_K_F3 80.061 63.039 16494 14128 14766 19374 16820 17878 16600 18724 24476 18458 17936 17701 20637 15962 16721 20428 20363 20914 15243 12974 15200 19106 17317 18210 16993 19062 24217 18657 18821 17951 20786 16770 17293 20472 19452 19857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254850000 26589 2310 24970 49942 40275 40275 1 9606 Homo sapiens 0.025102001514369476 TFEINPR Unmodified 875.45012 0.45011648 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;B4DU71;B4DHT9;Q58FF3;Q58FF2 HSP90B1;HEL-S-125m;TRA1;HSP90B2P;GRP94c Endoplasmin;Putative endoplasmin-like protein yes no 0 0 0 6 0.816 1 1 1 43.684 43.767 2 0.023296 10814 20230619_1887_Aki_TMTPro18x_K_F7 100.75 73.23 295920 217020 284060 284370 339110 363410 344690 338170 421600 341850 368900 398520 409540 315750 368480 431870 486680 440660 273360 199320 290380 282670 348060 360880 349530 347290 422870 347150 382940 399270 414700 334700 382260 432400 464190 418610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2289900000 26590 3452 24971 49943;49944;49945 40276 40276 1 9606 Homo sapiens 0.007409426919025464 TFESLVDFSK Unmodified 1171.5761 0.57610486 1026 Q16836-2;Q16836-3;Q16836;E9PF18;A0A0D9SFP2;B3KTT6;A0A140VK76;B2RB06;A0A0A0MSE2;A0A804HLB5;A0A1W2PNM1;A0A1W2PQ78;A0A804HKJ2;A0A1W2PQV5;A0A804HJW7;A0A1W2PRT2;A0A1W2PQC2 HADH Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes no 0 0 0 7.5 0.5 1 1 62.24 62.27 2 0.00019811 18839 20230619_1887_Aki_TMTPro18x_K_F7 137.98 104.71 257280 260650 308970 340920 286230 312410 348320 363110 320720 343910 327960 353750 357570 357700 380020 407980 415920 442540 238650 239110 309440 337340 300430 319210 346900 366960 328790 348780 337800 358870 365490 371330 388180 411030 397790 419860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 772350000 26591 1026 24972 49946;49947 40277 40277 1 9606 Homo sapiens -0.0028201531333706953 TFEVCDLPVR Unmodified 1234.6016 0.6016081 3031 H0Y938;H0YAC7;P35606-2;P35606;B4E2C9;A0A7I2V3G0;A0A7I2YQF9;D6R997;D6RBZ7;D6RCL6;D6RBG7;D6RBT6 COPB2 Coatomer subunit beta' yes no 0 0 0 5 0 1 54.186 54.255 2 7.694E-06 15533 20230619_1885_Aki_TMTPro18x_K_F5 133.13 115.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26592 3031 24973 49948 40278 40278 1 9606 Homo sapiens -0.006308640625775297 TFEVTPIR Unmodified 961.52328 0.52328142 260 A0A024R3R5;Q14739;A0A494C1L1;C9JXK0 LBR Lamin-B receptor yes no 0 0 0 6.5 0.5 1 1 48.117 48.201 2 0.016822 12743 20230619_1887_Aki_TMTPro18x_K_F7 91.853 77.336 1103800 867600 991050 985570 1104300 1148100 1043900 1064200 1278900 1074500 1146900 1087000 1432400 1091600 1042300 1312400 1273700 1085000 1019500 795490 1017600 988110 1136500 1147100 1063500 1093100 1284200 1086400 1194600 1103900 1433700 1137800 1080900 1301900 1215100 1033700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 996270000 26593 260 24974 49949;49950 40279 40279 1 9606 Homo sapiens 0.040980714145121055 TFFHQENVR Unmodified 1176.5676 0.56760585 4490 Q9H089 LSG1 Large subunit GTPase 1 homolog yes yes 0 0 0 7 0 1 38.248 38.312 3 1.6542E-12 8567 20230619_1887_Aki_TMTPro18x_K_F7 229.48 204.09 36696 30017 38833 41061 42143 50459 45839 43214 50984 33103 37378 34263 37233 28197 38885 38624 37451 28525 33948 27570 39342 40668 43637 50121 46150 44387 51044 34069 38974 34561 38064 29834 39428 38089 35785 27233 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92249000 26594 4490 24975 49951 40280 40280 1 9606 Homo sapiens -0.013615244393122339 TFFSFPAVVAPFK Unmodified 1456.7755 0.77547336 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4 GARS Glycine--tRNA ligase yes no 0 0 0 6.5 0.5 1 1 65.295 65.33 3 3.6848E-05 20473 20230619_1886_Aki_TMTPro18x_K_F6 114.82 96.071 221020 223580 267150 225300 198620 275770 247070 232040 284880 101710 81394 83980 88460 71201 170370 120930 103140 63379 205030 204610 266330 228250 213390 273960 247440 236660 279380 109610 93627 85796 93985 76430 167800 117690 99057 60953 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 331490000 26595 3576 24976 49952;49953 40281;40282 40281 2 9606 Homo sapiens 0.06535664705211275 TFGAGEADCGLRPLFEK Unmodified 1866.8934 0.89343302 2771 CON__P00735 yes yes 0 0 1 7.5 0.5 1 1 57.203 57.256 3 3.6726E-18 16668 20230619_1888_Aki_TMTPro18x_K_F8 172.6 148.56 + 68008 59481 67202 84463 142040 212190 128070 138150 239040 640270 1086400 1585600 342800 802070 805930 611470 716640 1160100 62906 54642 69672 84774 141910 203080 133880 159920 270840 647590 1045900 1537100 398410 840600 805660 649030 689610 1094500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 448440000 26596 2771 24977 49954;49955 40283;40284 40284 2 9606 Homo sapiens -0.005337955591357968 TFGENYVQELLEK Unmodified 1568.7722 0.77223848 2819 D3DSW3;O94903;E5RG77;B3KMP6;E5RFX7 PROSC Proline synthase co-transcribed bacterial homolog protein yes no 0 0 0 6 0 1 63.725 63.771 3 4.1826E-05 19833 20230619_1886_Aki_TMTPro18x_K_F6 113.76 83.699 36084 31598 37523 33116 37679 46901 42608 42403 49353 50011 40383 51289 47362 41513 46881 51376 49634 47896 33392 28939 37984 33524 39301 46275 42882 43814 49580 50172 42247 51627 48111 43653 47855 51267 47451 45535 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 434400000 26597 2819 24978 49956 40285 40285 1 9606 Homo sapiens 0.010603250698977718 TFGETHPFTK Unmodified 1163.5611 0.56112349 1222 A0A140VK27;P09960;B4DVZ8;P09960-2;P09960-4;P09960-3 LTA4H Leukotriene A-4 hydrolase;Leukotriene A(4) hydrolase yes no 0 0 0 7.5 0.5 1 1 44.044 44.094 3 1.0992E-06 10940 20230619_1887_Aki_TMTPro18x_K_F7 149.96 111.66 133770 108240 132690 146860 159090 166990 154840 147380 170970 159950 184800 190630 182030 162030 162410 200020 238540 210460 123680 99412 135350 145340 162980 166880 156870 152300 173790 161950 188860 191210 185080 170050 169890 200860 227300 199890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 448850000 26598 1222 24979 49957;49958 40286 40286 1 9606 Homo sapiens -0.014114623906834822 TFGPPPSLSPGAFSYSSSSR Unmodified 2027.9589 0.95887005 2433 B3KWQ6;P41219;P41219-2 PRPH Peripherin yes no 0 0 0 4.5 0.5 1 1 59.007 59.035 3 1.9181000000000002E-30 17906 20230619_1883_Aki_TMTPro18x_K_F4 215.51 195.83 105580 72069 95341 98525 87084 94530 94244 103500 114160 131830 129090 147260 151650 137250 170360 168920 135460 149110 97446 66242 97583 97279 91343 96093 95299 105860 115890 132150 132930 148440 154960 143490 170980 168160 130040 141790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1557699999.9999998 26599 2433 24980 49959;49960 40287;40288 40287 2 9606 Homo sapiens -0.013991028323744104 TFGSSLPVK Unmodified 934.51238 0.51238239 4278 Q8WUM0;B4E206;B4E3T7 NUP133 Nuclear pore complex protein Nup133 yes no 0 0 0 2 0 1 51.023 51.068 2 0.0097162 14939 20230619_1881_Aki_TMTPro18x_K_F2 85.666 32.95 65872 60166 64530 68854 74886 83437 76585 84673 95266 51375 54346 44214 55337 42761 63739 62332 50277 41112 60944 55139 65850 69032 77046 83290 77686 85489 94225 53563 57685 45266 56822 45183 63914 61149 48172 39307 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41731000 26600 4278 24981 49961 40289 40289 1 9606 Homo sapiens 0.04250669040231969 TFHEASEDCISR Unmodified 1450.6147 0.61469198 2216 Q68DS3;E9PHK0;CON__Q2KIS7;B2R582;P05452 DKFZp686H17246;CLEC3B Tetranectin yes no 0 0 0 2 0 1 35.263 35.32 3 9.0357E-10 7822 20230619_1881_Aki_TMTPro18x_K_F2 176.05 155.47 + 16609 7583.1 17415 23863 34500 34630 25844 25314 44427 16966 21745 27022 19627 23137 23486 19443 22853 24311 15322 7086.3 17918 22846 34259 33957 27097 26287 43214 17970 23323 26830 20337 23768 23757 19889 21882 23034 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40844000 26601 2216 24982 49962 40290 40290 1 9606 Homo sapiens -0.0925907774112602 TFHGAGLVVPVDK Unmodified 1338.7296 0.7295858 4615 Q9NWY4 C4orf27 UPF0609 protein C4orf27 yes yes 0 0 0 1 0 1 50.048 50.048 3 8.6845E-05 14380 20230619_1880_Aki_TMTPro18x_K_F1 104.17 80.939 79616 37335 59926 67071 47146 59964 59184 55222 72602 70606 71570 81490 95885 83444 66753 86374 92386 94070 73272 34507 62363 65145 50443 61008 59406 57201 73183 70895 74581 82275 95740 86165 69910 87130 88158 89260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87618000 26602 4615 24983 49963 40291 40291 1 9606 Homo sapiens 0.07377019522959927 TFHHVYSGK Unmodified 1074.5247 0.52467841 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 2.5 0.5 1 1 33.316 33.378 4 9.4736E-06 6996 20230619_1881_Aki_TMTPro18x_K_F2 148.52 97.431 206590 19598 179920 219280 212910 166630 211880 211830 210590 236800 241010 236430 265740 187310 143150 269650 219940 244550 189770 19953 185620 203910 217980 173280 213710 214030 216030 237810 246720 238450 264370 199340 152680 267850 209870 232450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212810000 26603 1748 24984 49964;49965 40292 40292 1 9606 Homo sapiens -0.009602944967127769 TFIAIKPDGVQR Unmodified 1343.7561 0.75613491 3490;1446 A0A384MTW7;P15531;P15531-2;E7ERL0;E5RHP0;C9K028;Q32Q12;P22392-2;J3KPD9;Q6FHN3;P22392;F6XY72 NME1;NME1-NME2;NME2 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 0 1 3.75 0.829 2 1 1 57.474 57.567 3 8.4886E-05 13580 20230619_1883_Aki_TMTPro18x_K_F4 116.06 97.622 1646100 1469200 1548500 1697200 1681700 1672600 1848900 1852600 1980200 2181100 1986000 1927900 2432500 1847100 2053400 2513400 2174400 2235200 1522300 1346700 1583900 1695500 1739300 1698300 1858700 1888700 2012200 2178500 2056500 1966900 2448900 1944200 2103900 2498000 2079700 2125700 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 60469000000 26604 1446;3490 24985 49966;49967;49968;49969 40293;40294;40295;40296 40296 4 9606 Homo sapiens 0.09800708414286419 TFIIGELHPDDRPK Unmodified 1636.8573 0.85730551 1420 Q59F44;A0A384ME44;P00167-2;P00167;J3KNC7 CYB5A Cytochrome b5 yes no 0 0 1 6.5 0.5 1 1 49.54 49.621 4 2.1028E-11 13745 20230619_1886_Aki_TMTPro18x_K_F6 179.39 116.11 92560 78358 81698 95073 86483 90088 84214 85745 97715 106370 116090 123820 113680 100220 94488 116320 122570 128170 85523 71871 84028 94567 89394 91411 85506 88482 99561 106900 118160 124070 115220 105000 98092 117240 117040 121590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219520000 26605 1420 24986 49970;49971 40297 40297 1 9606 Homo sapiens 0.06435115326326013 TFINLMTHICK Unmodified 1376.6945 0.69446263 472 B4E054;A0A024R7X3;B3KUZ7;A0A024R7U9;Q9UI12-2;Q9UI12;G3V126;Q8TF11;E5RG49;E5RHH0 ATP6V1H V-type proton ATPase subunit H yes no 0 0 0 5.5 0.5 1 1 60.197 60.252 3 6.3274E-09 18208 20230619_1886_Aki_TMTPro18x_K_F6 170.07 133.73 83804 72136 79602 75213 60146 71903 80596 77425 89139 55531 47521 42567 53879 37857 62050 49773 57170 40934 77484 66068 80898 75730 64617 73105 80339 78152 88570 56952 50997 43673 55139 39874 62607 49376 54635 39033 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88084000 26606 472 24987 49972;49973 40298 40298 1 9606 Homo sapiens 0.02118317399163061 TFIPHLESLGK Unmodified 1240.6816 0.68157298 4518 Q9H5Q4 TFB2M Dimethyladenosine transferase 2, mitochondrial yes yes 0 0 0 2 0 1 55.155 55.176 3 0.0011485 16678 20230619_1881_Aki_TMTPro18x_K_F2 89.403 66.929 35724 30947 33374 34979 31941 38251 38426 39521 44887 37221 32631 40776 39298 30415 34513 39594 45068 48321 33027 28363 34092 35051 33499 38458 38566 40223 44869 37851 34405 40855 39668 32229 35789 40108 43041 45791 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39564000 26607 4518 24988 49974 40299 40299 1 9606 Homo sapiens 0.07085945602921129 TFLAVKPDGVQR Unmodified 1329.7405 0.74048484 3842 Q9NUF9;Q13232;H3BPD9;H3BMQ7;H3BRA8 c371H6.2;NME3 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase 3 yes no 0 0 1 3 0 1 47.921 48.001 3 0.0002779 13240 20230619_1882_Aki_TMTPro18x_K_F3 97.273 69.26 208660 215670 232960 258280 240640 258860 255410 267050 308210 247110 284020 310140 281930 248890 283040 266440 300170 283200 193450 197660 234890 257370 249680 261950 258360 271770 309810 252780 292660 309830 287940 259610 288640 268500 286920 268870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 409830000 26608 3842 24989 49975 40300 40300 1 9606 Homo sapiens 0.08880421897265478 TFLEAWR Unmodified 921.47085 0.47085192 4552 Q9HCU0;A0A172Q381;A0A120HV04 CD248 Endosialin yes no 0 0 0 1 0 1 57.278 57.278 2 0.070299 17388 20230619_1880_Aki_TMTPro18x_K_F1 77.058 50.949 73786 65470 71267 66699 49714 63679 74438 71759 79514 72097 73402 70867 76225 63046 82635 89600 88271 81363 68244 59945 72268 67289 54075 64820 73797 72773 80439 72809 75737 71790 78014 66694 84263 89130 84355 77391 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51272000 26609 4552 24990 49976 40301 40301 1 9606 Homo sapiens 0.006975330715590644 TFLLEYHNR Unmodified 1191.6037 0.60365701 2117 A8K885;Q9UNH7;A0A0A0MRI2;B4DJS7;Q9UNH7-2;Q5QTQ6;G3V5X9 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 1 0 1 46.435 46.435 3 9.6937E-09 12886 20230619_1880_Aki_TMTPro18x_K_F1 205.12 189.48 33529 26728 29601 30533 32670 35973 34318 33353 40169 33764 33891 33800 37247 34102 33541 42668 36073 36635 30968 24507 30448 30602 33752 35909 34683 34266 40332 34123 35215 34344 37754 35600 34363 42378 34494 34858 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55445000 26610 2117 24991 49977 40302 40302 1 9606 Homo sapiens 0.015519327375386638 TFLQDLAR Unmodified 962.51853 0.5185304 246 A0A024R3I8;O14681-3;O14681;E9PQN7;A0A087WV44;E9PLB8;E9PL33;Q59EJ1;E9PM05;E9PS58;E9PK61 EI24 Etoposide-induced protein 2.4 homolog yes no 0 0 0 7.5 0.5 1 1 55.637 55.698 2 0.004638 15992 20230619_1888_Aki_TMTPro18x_K_F8 129.72 85.907 131160 110400 112580 118570 112570 149830 133910 142840 169720 79257 72101 66079 66306 62303 96669 79931 81517 56818 121160 101150 115980 119530 117810 148920 134840 144660 166680 83278 78346 67642 69385 65270 96827 78817 77971 54301 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54519000 26611 246 24992 49978;49979 40303 40303 1 9606 Homo sapiens 0.03577187271753246 TFLQTVSSEK Unmodified 1138.587 0.58700389 4342 Q96EL3 MRPL53 39S ribosomal protein L53, mitochondrial yes yes 0 0 0 7.5 0.5 1 1 53.317 53.392 3 0.00040971 15017 20230619_1888_Aki_TMTPro18x_K_F8 107.03 83.175 91812 72761 86855 93250 87433 101840 100320 98881 112260 105470 103490 98967 108550 97173 106050 115110 115350 113930 84842 66791 88701 92597 91175 102250 100770 101400 113340 106070 106800 100740 110550 101230 108450 115300 110260 108230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201820000 26612 4342 24993 49980;49981 40304;40305 40305 2 9606 Homo sapiens 0.023253870609551086 TFLTNDQTK Unmodified 1066.5295 0.52948901 3613 P49792;A0A8V8TLN4;A0A8V8TMN6;A6NKT7;J3KNE0;Q7Z3J3;A0A8Q3SIN4;B4DYH0;F8VYC4;A0A286YES2;Q99666;O14715;P0DJD1;P0DJD0;A0A8Q3SII4;A0A8Q3SII5;J3KQ37;V9HWE4;B4DTT2;B4E0M7;B4DTM4 RANBP2;RGPD3;RGPD4;RGPD1;RGPD5;RGPD8;RGPD2;HEL161 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RanBP2-like and GRIP domain-containing protein 4;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 1 yes no 0 0 0 6.5 0.5 1 1 46.96 47.045 2 6.8376E-05 12215 20230619_1887_Aki_TMTPro18x_K_F7 180.27 127.1 88334 69693 81757 81160 98947 110040 87848 84129 108040 107980 125210 119220 127930 100340 106470 124580 141780 128320 81611 63914 83846 81399 101180 108500 89863 88374 109630 108220 127700 119920 129430 105450 110680 124960 135220 121880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63750000 26613 3613 24994 49982;49983 40306 40306 1 9606 Homo sapiens -0.0011145514463350992 TFLVGER Unmodified 820.4443 0.44430282 3510 Q53YD7;P26641;P26641-2;B4DUP0 EEF1G Elongation factor 1-gamma yes no 0 0 0 6 1.41 1 1 1 1 1 45.768 45.834 2 0.005588 11620 20230619_1887_Aki_TMTPro18x_K_F7 139.68 89.64 1306500 1060400 1089700 1240900 1182100 1299400 1251000 1264300 1433700 1424000 1423700 1404700 1526900 1247600 1271300 1617500 1214300 1508200 1206300 972460 1127300 1239200 1223100 1309000 1263200 1298300 1450300 1430000 1465300 1422000 1542300 1311800 1296200 1612400 1164400 1432600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4529900000 26614 3510 24995 49984;49985;49986;49987;49988 40307;40308;40309 40309 3 9606 Homo sapiens 0.026898441802472917 TFLVWVNEEDHLR Unmodified 1656.826 0.82600539 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;H0YJG0 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 0 5 0.816 1 1 1 61.103 61.139 3 2.3112E-36 18355 20230619_1885_Aki_TMTPro18x_K_F5 237.32 203.14 707460 647170 758560 688760 597360 863170 751130 898640 1003700 1023900 736780 1005900 1001000 1002000 1052300 1098200 1052800 1242000 655040 592710 763720 695040 639260 860080 756680 918150 998610 1027500 782300 1020700 1016900 1038400 1069500 1110000 1008600 1177400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3323799999.9999995 26615 3441 24996 49989;49990;49991 40310;40311;40312 40311 3 9606 Homo sapiens 0.023865422922881407 TFNLPLLMLGGGGYTIR Unmodified 1821.9811 0.98112582 4305 Q92769;Q92769-3;B3KUJ5;Q59GB9 HDAC2 Histone deacetylase 2;Histone deacetylase yes no 0 0 0 8 0 1 65.768 65.787 3 5.6781E-14 20253 20230619_1888_Aki_TMTPro18x_K_F8 164.77 150.3 14137 13955 11587 12061 10423 10488 12431 13912 12355 16068 17541 11889 15040 12909 14870 13177 16156 16395 13070 12757 11966 12334 10968 10820 12427 14026 12807 15986 17606 12309 15419 13308 15185 13423 15447 15537 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79165000 26616 4305 24997 49992 40313 40313 1 9606 Homo sapiens 0.10301450102315357 TFNLTAGSLESTEPIYVYK Unmodified 2132.0678 0.067751799 2490 B4DHL7;H3BND4;Q6P996-3;Q6P996-4;Q6P996-5;Q6P996 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes no 0 0 0 8 0 1 62.816 62.841 3 0.0095783 19025 20230619_1888_Aki_TMTPro18x_K_F8 59.281 50.462 29319 20819 28922 31506 29495 34470 31054 33480 34495 39720 37524 36529 42733 34015 35508 43106 38078 40253 27085 19156 29438 30965 30651 34591 31344 34427 35107 39701 38574 37151 43087 35663 36419 42990 36423 38255 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62681000 26617 2490 24998 49993 40314 40314 1 9606 Homo sapiens 0.0470006334721802 TFNMDEYVGLPR Oxidation (M) 1456.6657 0.66566492 2030 A8K3S1;P46926;D6RAY7;D6R9P4;D6RFF8;D6R917;D6RB13;A0A024R9X5;Q8TDQ7-3;Q8TDQ7-2;Q8TDQ7 GNPDA1;GNPDA2 Glucosamine-6-phosphate isomerase;Glucosamine-6-phosphate isomerase 1;Glucosamine-6-phosphate isomerase 2 yes no 0 1 0 4.5 0.5 1 1 52.087 52.136 2 0.0004304 14676 20230619_1885_Aki_TMTPro18x_K_F5 103.26 88.582 87929 77143 94519 89304 100000 91043 94203 88808 87462 109560 119330 117400 123670 111100 119190 130490 135470 133860 81393 70715 95485 89254 103080 91963 95173 91464 90866 109810 121130 118650 125910 115810 122240 130980 129440 127120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144590000 26618 2030 24999 49994;49995 40315 40315 1273 1 9606 Homo sapiens -0.044401286962738595 TFNMDEYVGLPR Unmodified 1440.6708 0.6707503 2030 A8K3S1;P46926;D6RAY7;D6R9P4;D6RFF8;D6R917;D6RB13;A0A024R9X5;Q8TDQ7-3;Q8TDQ7-2;Q8TDQ7 GNPDA1;GNPDA2 Glucosamine-6-phosphate isomerase;Glucosamine-6-phosphate isomerase 1;Glucosamine-6-phosphate isomerase 2 yes no 0 0 0 6.5 0.5 1 1 59.812 59.866 2 2.7141E-09 18069 20230619_1886_Aki_TMTPro18x_K_F6 178.81 144.28 208620 171040 212450 205540 174320 199700 213470 197470 193530 250130 260350 276070 293890 250710 272490 312390 299790 339650 192940 156880 214880 204730 185090 202360 212480 203390 201200 250640 265610 278260 297860 262750 279200 314320 286850 322170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 205250000 26619 2030 24999 49996;49997 40316;40317 40316 2 9606 Homo sapiens -0.031958248336650286 TFNPGAGLPTDK Unmodified 1216.6088 0.60880197 3422 Q53G61;Q53G21;P09661;H0YLR3;H0YMA0 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 0 7.5 0.5 2 2 51.337 51.414 2;3 0.001483 14159 20230619_1888_Aki_TMTPro18x_K_F8 111.94 91.035 231810 179110 208230 215180 233400 277870 256690 241870 319810 270270 288460 278950 298490 252910 269590 310360 319890 337990 214090 164320 213950 215170 241370 275360 259340 250340 320830 272060 297790 282010 303010 264850 277650 312370 305710 320660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 728710000 26620 3422 25000 49998;49999;50000;50001 40318;40319 40319 2 9606 Homo sapiens 0.009161918095060173 TFNPGAGLPTDKK Unmodified 1344.7038 0.70376498 3422 Q53G61;Q53G21;P09661;H0YLR3;H0YMA0 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 1 2 0 1 48.007 48.078 3 6.6985E-08 13545 20230619_1881_Aki_TMTPro18x_K_F2 155.57 125.13 238100 214470 237560 230710 238760 243750 246720 246700 275460 276050 267140 234280 299850 231640 262900 299750 302120 258080 220300 196450 241300 231990 247970 245720 249270 252580 278810 276160 275680 239830 303110 242730 270330 297700 288380 245730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 419760000 26621 3422 25001 50002 40320 40320 1 9606 Homo sapiens 0.045201252806919 TFNQVVKPR Unmodified 1087.6138 0.61382777 4311 Q92917 GPKOW G patch domain and KOW motifs-containing protein yes yes 0 0 1 5 0 1 40.902 40.99 3 0.00010197 9941 20230619_1885_Aki_TMTPro18x_K_F5 142.56 126.99 143650 105400 129890 131210 149100 155460 150690 145140 174270 154370 177900 148400 171520 137530 169020 136990 149510 125200 132640 96756 133370 130720 153380 155150 152570 149230 176270 155390 181890 150620 175030 142220 170650 137160 143070 119130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137370000 26622 4311 25002 50003 40321 40321 1 9606 Homo sapiens 0.07352540462784418 TFNTSTGGLLLPSDTK Unmodified 1650.8465 0.84646606 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 4.5 3.5 1 1 58.5 58.524 3 3.8304E-08 17862 20230619_1880_Aki_TMTPro18x_K_F1 128.74 94.053 393600 309560 332090 348680 339220 389030 389520 362460 452590 461190 433180 445280 486140 393540 423750 531400 498690 506050 363390 283810 342700 349540 353470 389800 391730 374810 456960 460350 447740 451050 491470 415030 436730 530040 476470 480890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3950099999.9999995 26623 150 25003 50004;50005 40322;40323 40322 2 9606 Homo sapiens 0.047076681614271365 TFNTSTGGLLLPSDTKR Unmodified 1806.9476 0.94757708 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 1 3 0 1 52.175 52.24 3 0.00043697 15104 20230619_1882_Aki_TMTPro18x_K_F3 73.735 50.932 48078 51151 56106 53760 64752 66321 75028 58953 64460 52070 56170 48783 56587 42548 99151 45920 47680 45310 44602 46819 56453 54271 66737 65977 74679 60593 65898 52918 58102 49481 59668 44304 96937 46237 46101 43051 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180790000 26624 150 25004 50006 40324 40324 1 9606 Homo sapiens 0.07638119864122928 TFNVDMYEEIHR Unmodified 1552.698 0.69802768 2750 Q13098-7;Q13098;Q13098-5;C9JFE4;A8K070;A0A096LPJ3;A0A096LP07;B4DND6;J3KSA5;J3QS84;J3KRE8;J3KRJ4;J3QL53;J3QLT0;J3QLE8;J3KTB0;J3QS88 GPS1 COP9 signalosome complex subunit 1 yes no 0 0 0 4 0 1 51.616 51.644 3 2.0201E-05 14754 20230619_1883_Aki_TMTPro18x_K_F4 123.99 119.84 77857 67329 65117 72103 67149 67957 70886 79715 81463 107160 107380 115350 122470 107960 92659 106670 131030 124820 71920 61678 67267 72414 69683 69356 71641 81332 83556 107020 109630 116400 123150 111550 96932 108200 124960 118380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106380000 26625 2750 25005 50007 40325 40325 1 9606 Homo sapiens -0.05621341293272053 TFNVDMYEEIHRK Unmodified 1680.793 0.7929907 2750 Q13098-7;Q13098;Q13098-5;C9JFE4;A8K070;A0A096LPJ3;A0A096LP07;B4DND6;J3KSA5;J3QS84;J3KRE8;J3KRJ4;J3QL53;J3QLT0;J3QLE8;J3KTB0;J3QS88 GPS1 COP9 signalosome complex subunit 1 yes no 0 0 1 6.5 0.5 1 1 48.693 48.776 4 6.3144E-06 13046 20230619_1887_Aki_TMTPro18x_K_F7 127.76 107.65 119230 84755 100090 117490 83352 116760 117450 111580 145790 133690 127460 133830 147870 141680 103970 165450 164750 166340 110010 77901 103160 115900 89101 117920 117300 114980 146170 134000 132520 136150 148370 147080 110190 165750 157060 157980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143310000 26626 2750 25006 50008;50009 40326 40326 1 9606 Homo sapiens -0.020174078221089076 TFPACDGSHNK Unmodified 1232.5244 0.52442041 4235 Q8N5K1;D6RCF4 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes no 0 0 0 6 0 1 36.595 36.663 3 1.3441E-05 8180 20230619_1886_Aki_TMTPro18x_K_F6 142.47 123.01 63932 49062 58151 68413 68045 71218 81985 80744 103700 83607 79195 70436 96285 78794 65680 91402 110980 86515 59049 45083 59774 67522 70278 72011 82478 81892 103400 83996 83057 72443 96315 81696 69953 91301 105580 82314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194670000 26627 4235 25007 50010 40327 40327 1 9606 Homo sapiens -0.0825408227888147 TFPGCTIR Unmodified 950.46439 0.46438634 1535 B3KMZ6;B2RDF5;A0A3R5W301;Q9UBT2;Q9UBT2-2;K7EPL2;B7Z5X0 UBA2 SUMO-activating enzyme subunit 2 yes no 0 0 0 1.5 0.5 1 1 42.863 42.903 2 0.011898 11141 20230619_1881_Aki_TMTPro18x_K_F2 96.253 49.186 171860 142710 147950 169850 153180 173040 178740 180970 196580 176100 174270 159140 189420 156280 170830 193020 212000 259440 158750 130880 152510 169360 159470 174920 179290 184200 198340 177750 180420 162340 191980 163420 176450 196970 202770 245540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 131120000 26628 1535 25008 50011;50012 40328;40329 40329 2 9606 Homo sapiens -0.012827281514546485 TFPTVNPSTGEVICQVAEGDKEDVDK Unmodified 2834.328 0.3280186 1475 P05091;A0A384NPN7;F8VP50 ALDH2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 1 4.5 1.5 1 1 60.538 60.581 4 2.9663E-20 18348 20230619_1886_Aki_TMTPro18x_K_F6 161.68 148.9 47752 39815 51014 44337 44411 50196 52501 54055 61260 54488 66997 84194 61668 66585 79706 72643 77417 89650 44185 36491 51413 44522 46877 50410 52764 54971 62094 55944 68395 83486 64062 69520 80572 73879 74179 84925 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 185430000 26629 1475 25009 50013;50014 40330;40331 40331 2 9606 Homo sapiens -0.01577228965516042 TFPTVNPTTGEVIGHVAEGDR Unmodified 2196.0811 0.081110453 1437 A0A384MTJ7;P30837;A0A0U1RQK9 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes no 0 0 0 5 0 1 53.159 53.231 3 0.0014236 15167 20230619_1885_Aki_TMTPro18x_K_F5 70.315 52.826 21885 20262 20039 22486 19961 23708 25417 22725 25396 33575 39041 41815 45321 40094 31024 49188 48644 48553 20239 18563 20529 22547 20897 23864 25314 23586 26444 33593 39691 42032 45398 41881 32871 49192 46372 46123 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110290000 26630 1437 25010 50015 40332 40332 1 9606 Homo sapiens 0.030913141791643284 TFPTVNPTTGEVIGHVAEGDRADVDR Unmodified 2752.3416 0.34163525 1437 A0A384MTJ7;P30837;A0A0U1RQK9 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes no 0 0 1 4 0 1 51.353 51.381 4 2.2112999999999997E-28 14637 20230619_1883_Aki_TMTPro18x_K_F4 180.56 164.67 18625 20786 22369 22084 24552 20857 22756 28771 27987 23121 33481 26464 30199 26604 21551 33293 147120 29832 17290 19025 22434 22203 25228 21389 23237 28677 28402 23771 33884 26778 30700 27779 28997 33121 138730 28801 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139920000 26631 1437 25011 50016 40333 40333 1 9606 Homo sapiens 0.03555809648514696 TFPVLLR Unmodified 844.51707 0.51707383 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4.5 0.5 1 1 56.085 56.121 2 0.0069751 16296 20230619_1885_Aki_TMTPro18x_K_F5 128.82 74.279 291700 291610 329140 336690 333170 370220 384540 336010 314260 270580 276180 203600 234340 175990 370450 171530 187350 162900 270380 267190 331390 336820 346770 371090 382530 344050 322480 274970 283210 208910 246580 182390 363080 172650 180860 154910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 358500000 26632 3758 25012 50017;50018 40334;40335 40335 2 9606 Homo sapiens 0.08859597973651034 TFQGHTNEVNAIK Unmodified 1457.7263 0.72629134 4477;696 Q9BZK7;C9JLJ1;B7Z475;A0A0D9SF63;A0A1B0GVH3;Q9BQ87;A0A024R189;B4DP68;A0A804HJZ5;A0A2R8YFW3;Q59F53;A0A024RBV9;O60907-2;O60907 TBL1XR1;TBL1Y;TBL1X F-box-like/WD repeat-containing protein TBL1XR1;F-box-like/WD repeat-containing protein TBL1Y;F-box-like/WD repeat-containing protein TBL1X no no 0 0 0 6.5 0.5 1 1 41.152 41.234 3 1.0238E-11 9752 20230619_1887_Aki_TMTPro18x_K_F7 191.49 109.9 227730 158230 205880 212390 216480 234000 236810 220750 223720 260820 286240 265670 286370 234270 232620 278350 361320 266600 210210 145400 211150 210300 224500 234670 237250 227550 231290 261520 290570 268500 289760 245050 244790 278240 343810 253690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 390860000 26633 4477;696 25013 50019;50020 40336;40337 40337 2 9606 Homo sapiens 0.015737246783146475 TFQGKPIK Unmodified 917.53345 0.53345218 1776 A0A8I5KWN8;A0A8I5KVU2;Q92615 LARP4B La-related protein 4B yes no 0 0 1 4 0 1 42.702 42.745 3 0.078264 10724 20230619_1883_Aki_TMTPro18x_K_F4 55.112 37.786 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26634 1776 25014 50021 40338 40338 1 9606 Homo sapiens 0.0713867913973445 TFQGPNCPATCGR Unmodified 1464.6238 0.62381688 2749 C9JTS3;Q59EM1;C9JG97;C9JEH3;Q13685 AAMP Angio-associated migratory cell protein yes no 0 0 0 8 0 1 38.499 38.485 2 0.00028599 8866 20230619_1888_Aki_TMTPro18x_K_F8 105.46 94.703 8613 5789.9 7547.8 10018 9488.3 12342 10478 10280 12791 11174 13355 8641.6 13040 10332 9015.3 16455 15051 11901 7947.2 5337.9 7803.8 9787.3 9748.9 12244 10576 10667 12913 11177 13623 8979.1 13129 10925 9611.8 16159 14320 11364 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10893000 26635 2749 25015 50022 40339 40339 1 9606 Homo sapiens -0.0899100765645926 TFQMAEYLK Unmodified 1129.5478 0.54778161 2664 Q75MT5;B5BUD2;P35250-2;P35250;A0A087WVY3;H7C5P4 RFC2 Replication factor C subunit 2 yes no 0 0 0 1 0 1 59.183 59.183 2 0.0031465 18193 20230619_1880_Aki_TMTPro18x_K_F1 99.815 69.831 72010 62868 71715 74096 56894 80907 70955 75646 82475 61405 56418 41704 55963 43969 62367 62370 58488 44906 66611 57640 72685 74009 60803 81133 71108 77248 82269 62268 59015 43394 57421 46263 63088 61410 55904 42886 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112510000 26636 2664 25016 50023 40340 40340 1 9606 Homo sapiens -0.011810364942903107 TFSEILNR Unmodified 978.51345 0.51344502 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 7.5 0.5 1 1 51.482 51.559 2 0.0010826 14216 20230619_1888_Aki_TMTPro18x_K_F8 149.4 106.28 407110 339890 378980 412830 367920 410620 432630 424780 475510 489560 474780 499990 515530 424500 449250 567650 539760 563130 376270 311770 387380 410940 384870 415760 433840 434780 482170 491530 489100 504570 521710 448010 463660 567500 515730 534820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 567020000 26637 3881 25017 50024;50025 40341 40341 1 9606 Homo sapiens 0.023328834091330464 TFSFAIPLIEK Unmodified 1264.7067 0.7067251 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 3.5 0.5 1 1 64.307 64.328 3 6.9364E-05 20249 20230619_1882_Aki_TMTPro18x_K_F3 125.3 97.129 459580 382670 428680 474030 331810 411320 434300 444790 443260 551130 474720 462060 591150 431250 466710 662050 491800 540300 424780 351090 436890 470440 355430 421400 432490 454980 453010 548310 490540 472360 593220 458310 479270 654150 470640 514300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 605660000 26638 1748 25018 50026;50027 40342;40343 40342 2 9606 Homo sapiens 0.0849600040551195 TFSNVFGR Unmodified 926.46102 0.46101552 1947 A4FUT8;Q7LBC6;Q7LBC6-2 JMJD1B;KDM3B Lysine-specific demethylase 3B yes no 0 0 0 4 0 1 50.469 50.5 2 0.028251 14209 20230619_1883_Aki_TMTPro18x_K_F4 81.642 74.292 84724 67076 72355 79203 76683 93577 88340 89879 96033 84161 86573 85201 97155 74574 80833 93157 90227 96498 78231 61522 74652 79186 79722 93428 88632 91910 97001 85410 89716 86119 97998 78306 83071 93464 86281 91596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47084000 26639 1947 25019 50028 40344 40344 1 9606 Homo sapiens -0.00515654933803944 TFSSIPVSR Unmodified 992.5291 0.52909508 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2 0.816 1 1 1 45.416 45.469 2 8.3451E-06 12327 20230619_1881_Aki_TMTPro18x_K_F2 195.17 167.92 474620 354120 433300 461900 489150 538400 534420 524500 615010 536090 586240 622400 612860 480590 519810 580740 640730 649980 438310 325200 444650 458580 505030 538240 538640 537120 620610 543850 604170 623020 620060 505960 537210 585680 611940 616590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 404850000 26640 3881 25020 50029;50030;50031 40345 40345 1 9606 Homo sapiens 0.03253169926199462 TFSVTGWK Unmodified 924.47052 0.47051757 2607 B4DW13;Q6YP21-3;Q6YP21 hCG_23341;CCBL2 Kynurenine--oxoglutarate transaminase 3 yes no 0 0 0 3.5 0.5 1 1 56.41 56.432 2 0.0027076 16827 20230619_1883_Aki_TMTPro18x_K_F4 137.88 100.32 259490 229960 264590 249630 256270 330150 294770 270350 316660 328600 352980 343900 373440 324670 336540 347400 389800 428710 240100 210670 268210 251640 268220 326330 295690 281900 322880 329520 361290 347780 378800 336870 345870 353250 372710 406180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135570000 26641 2607 25021 50032;50033 40346;40347 40347 2 9606 Homo sapiens 0.005261133517251437 TFSVWYVPEVTGTHK Unmodified 1749.8726 0.87262123 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98 FLNA Filamin-A yes no 0 0 0 2 0 1 60.267 60.279 3 5.7009E-14 18754 20230619_1881_Aki_TMTPro18x_K_F2 175.15 154.49 116620 94727 107520 108000 115690 148590 133760 123230 137550 141500 138850 152410 136420 137530 143970 136810 152610 178010 107760 86846 110150 108520 120170 146550 133920 128130 140010 142380 142440 153620 139820 142290 146710 139820 146110 168540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 275470000 26642 3484 25022 50034 40348 40348 1 9606 Homo sapiens 0.027679821235324198 TFSWASVTSK Unmodified 1112.5502 0.55022446 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7I2V5M7;A0A7P0P2U7;A0A7I2YQU8;A0A7I2V651;B7Z8K4;A0A7I2YQM1;A0A7I2V4D8 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 3.5 0.5 2 2 57.364 57.383 2;3 1.5476E-13 17370 20230619_1882_Aki_TMTPro18x_K_F3 259.82 199.02 298960 250860 283540 294070 256720 325490 312520 310640 338700 345590 280820 254860 338710 252220 296320 350010 305120 272360 276370 230030 289030 293900 270640 326350 312710 319250 341520 344650 293230 262880 341620 265580 302830 345670 291620 259630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 841530000 26643 3846 25023 50035;50036;50037;50038 40349;40350 40349 2 9606 Homo sapiens -0.0015486476497699186 TFSYAGFEMQPK Oxidation (M) 1420.6333 0.63330216 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 1 0 5.67 3.3 1 2 53.917 53.964 2;3 1.106E-05 15217 20230619_1888_Aki_TMTPro18x_K_F8 130.44 97.027 180490 157300 169700 187240 189230 190910 179570 193310 200620 205000 214600 207940 234000 201610 206690 247750 221700 246910 166880 144230 173640 186700 194650 192910 182360 197610 203850 206640 220320 210870 236920 210610 211720 248050 212150 234430 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1257200000 26644 4005 25024 50039;50040;50041 40351;40352;40353 40352 2643 3 9606 Homo sapiens -0.06018916099287708 TFSYAGFEMQPK Unmodified 1404.6384 0.63838754 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 5.67 3.3 1 2 58.883 58.883 2;3 2.536E-25 17365 20230619_1888_Aki_TMTPro18x_K_F8 216.45 199.51 260120 188780 213140 219060 182220 238760 208460 232180 243710 267880 253310 231470 314420 247470 243700 360880 294170 276310 240000 173180 220010 219060 192900 239730 209920 238510 246890 267700 261910 237500 315510 260740 252480 355740 280840 263400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 681200000 26645 4005 25024 50042;50043;50044 40354;40355;40356 40356 3 9606 Homo sapiens -0.047746122366561394 TFSYPLDLLLK Unmodified 1308.7329 0.73293985 2471 G3V1A0;G5EA23;E9PKS9;B4DF36;E9PQE8;J3KP27;B4DF86;E9PN70;Q9Y296-2;Q9Y296 TRAPPC4 Trafficking protein particle complex subunit 4 yes no 0 0 0 3 0 1 65.2 65.234 3 0.00062849 20641 20230619_1882_Aki_TMTPro18x_K_F3 94.465 60.087 15298 14608 16463 16549 14821 15788 15547 17052 17608 19903 22369 25901 29859 26460 20659 28049 22138 31391 14169 13384 16600 16552 15538 16058 15714 17411 18027 20142 23069 26040 29801 27356 21295 28327 21231 29746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15043000 26646 2471 25025 50045 40357 40357 1 9606 Homo sapiens 0.09092269576990475 TFTAWCNSHLR Unmodified 1391.6405 0.64045322 387;1069 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;Q86TX4;G3V2N5;A0A804HJQ9;B4DRP5;A0A494C1A0;P35609;P35609-2;A0A804HI95;Q08043;B2R8Y4;B7Z4V1;A0A804HKG0;A0A494C033;A0A804HIY0;A0A494C166;A0A494C0Q3;K7EP19;B3W6H4;F5GXS2;A0A0S2Z3G9;O43707;H7C144;O43707-3;A0A0S2Z3X3;B4E337;A0A0S2Z3C0;B4DSX0 ACTN1;ACTN2;ACTN3;ACTN4;MLL-ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 no no 0 0 0 3.5 0.5 1 1 45.471 45.531 3 4.3401E-18 11956 20230619_1883_Aki_TMTPro18x_K_F4 240.85 194.49 152690 124110 136020 116630 128690 146790 153820 144390 182920 86347 90111 88126 91048 81684 116720 95713 107730 89183 141060 113600 139350 118950 135030 146140 154460 146130 180660 90618 96925 89246 94191 85184 117610 95672 103030 84844 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 312340000 26647 387;1069 25026 50046;50047 40358 40358 1 9606 Homo sapiens -0.03970138708200466 TFTDCFNCLPIAAIVDEK Unmodified 2112.986 0.98601278 3705;3704;685 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;B4DJ75;B7ZB67;H0Y3Y6;B4E163;C4TNW5;P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;B3KXM2;P62136-3;A0A024RBP2;F8W0W8;P36873;P36873-2;Q9UPN1;F8VYE8;F8VR82 HEL-S-80p;PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 7 0.816 1 1 1 64.987 65.017 3 2.7676E-14 20078 20230619_1887_Aki_TMTPro18x_K_F7 165.16 148.85 454040 341100 423230 471130 393830 488210 470790 454420 511800 571090 498370 487710 614010 482950 516230 685890 527480 571080 419390 313430 432410 465180 413950 491400 471550 469740 519110 568360 516950 499010 618080 509170 528240 679050 504890 543470 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2759800000 26648 3705;3704;685 25027 50048;50049;50050 40359;40360;40361;40362 40361 4 9606 Homo sapiens -0.0259607860784854 TFTEMDSHEEK Oxidation (M) 1368.5504 0.55036039 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2;Q6P1Q5 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 1 0 2 0.816 1 1 1 36.445 36.483 3 2.2935E-06 8556 20230619_1880_Aki_TMTPro18x_K_F1 146.17 126.84 185250 131500 171150 195860 236680 243300 223330 230150 271900 236420 274570 256330 277310 231910 224760 269580 307250 274390 171050 120970 176160 193020 240250 242080 227430 236140 274250 239290 281510 258630 280500 242040 234260 270450 292950 260690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 195550000 26649 2181 25028 50051;50052;50053 40363;40364;40365 40363 1351 3 9606 Homo sapiens -0.11917277617931177 TFTEMDSHEEK Unmodified 1352.5554 0.55544577 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2;Q6P1Q5 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 0 2 0.816 1 1 1 41.193 41.238 3 2.2821E-17 10373 20230619_1881_Aki_TMTPro18x_K_F2 231.92 197.03 437750 349340 417770 427680 473940 549750 526320 483280 609320 589790 596260 575560 598440 486260 472180 690980 926180 648650 404560 320520 427050 427070 489560 545070 530050 501150 615570 590040 612160 582180 605170 515440 508490 688000 879850 617550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 336530000 26650 2181 25028 50054;50055;50056 40366;40367;40368 40368 3 9606 Homo sapiens -0.10672973755299608 TFTTQETITNAETAK Unmodified 1654.805 0.80499517 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;B4DVJ0;K7EQ48;A0A2R8Y6C7;A0A0J9YYH3;A0A0J9YX90;A0A0J9YXP8;CON__Q3ZBD7 GPI Glucose-6-phosphate isomerase yes no 0 0 0 4.5 0.5 1 1 49.628 49.684 3 3.5511E-14 13804 20230619_1883_Aki_TMTPro18x_K_F4 182.37 155.35 177320 145850 151740 155660 156400 204190 155450 161520 208830 202570 209810 199430 241500 183000 182750 226350 229820 235310 163780 133630 156390 157070 162480 201800 158500 169010 209810 202510 216450 202100 242560 191740 189700 227130 219480 223380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1206900000 26651 1326 25029 50057;50058 40369 40369 1 9606 Homo sapiens 0.0037848740209938114 TFVDFFSQCLHEEYR Unmodified 1976.8727 0.87269758 1271 A0A1B0GV93;B4DWS6;B3KQJ0;Q53GQ0;D3DR22 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes no 0 0 0 7.5 0.5 1 1 62.866 62.895 3 9.4068E-07 19156 20230619_1887_Aki_TMTPro18x_K_F7 120.7 111.77 80131 99701 145150 76205 50093 64671 84458 74517 85229 82948 57398 79523 115110 115700 110930 136880 137000 163360 74834 91006 140180 79027 60357 66608 83339 75720 85765 83330 62943 82151 115640 119260 114460 138590 131010 154780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 871990000 26652 1271 25030 50059;50060 40370 40370 1 9606 Homo sapiens -0.07666385938750864 TFVEAGK Unmodified 750.3912 0.39120462 4645 Q9P287-2;B4E318;B4DUS0;Q9P287-4;Q9P287-3;Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein yes no 0 0 0 6.5 1.12 1 1 1 1 48.576 48.653 2 0.083595 12950 20230619_1887_Aki_TMTPro18x_K_F7 72.234 72.234 3226400 2632100 2965500 2975900 3715700 3643500 3635500 3554400 4505300 3542400 4281300 4051100 4247300 3562400 3653500 4348900 4424500 4040800 2981300 2412900 3045000 2987000 3796200 3633400 3696400 3636800 4527900 3598300 4399300 4075700 4308100 3731700 3771900 4338600 4223200 3842700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4030099999.9999995 26653 4645 25031 50061;50062;50063;50064 40371 40371 1 9606 Homo sapiens 0.006024663975722433 TFVNITPAEVGVLVGK Unmodified 1642.9294 0.92940782 3400 P07737;I3L3D5 PFN1 Profilin-1 yes no 0 0 0 2.5 0.5 1 1 63.95 63.969 3 3.5188E-11 20077 20230619_1882_Aki_TMTPro18x_K_F3 156.49 137.66 222850 187990 208330 218310 183000 212310 198480 229210 223300 280620 262960 264980 286670 236670 254110 316390 243160 273260 206000 172360 212500 217980 192650 215560 200210 234270 227990 280220 268970 268800 290170 249260 258740 314080 232970 259890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1326400000 26654 3400 25032 50065;50066 40372 40372 1 9606 Homo sapiens 0.13366029680037173 TFVSGACDASIK Unmodified 1254.5914 0.59143734 3730 Q6FHM2;P62879;C9JIS1;C9JXA5;E7EP32;P62879-2 GNB2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes no 0 0 0 6.5 0.5 1 1 49.2 49.281 3 3.7678E-13 13229 20230619_1887_Aki_TMTPro18x_K_F7 163.12 138.93 298340 274200 283860 311800 268420 305060 303660 321510 348970 360290 353270 373910 431910 351810 347060 402680 410370 402130 275970 251270 289500 311800 281120 309430 305660 328350 353330 362420 365780 378180 434220 366400 358190 403680 391970 381990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1167900000 26655 3730 25033 50067;50068 40373;40374 40374 2 9606 Homo sapiens -0.025674717878246156 TFVSGACDASSK Unmodified 1228.5394 0.53940177 4542 Q9HAV0;A0A7I2S2S9;A8K3F6;H7C5J5;A0A6Q8PFW8;A0A6Q8PFE0;A0A6Q8PFV8;A0A6Q8PG88;B4DLV5 GNB4 Guanine nucleotide-binding protein subunit beta-4 yes no 0 0 0 6.5 0.5 1 1 43.896 43.983 3 2.8465E-07 10880 20230619_1887_Aki_TMTPro18x_K_F7 159.44 154.9 259500 164660 236860 267700 311480 301440 285730 306010 307840 291350 352770 376950 337020 297530 339690 317880 399580 392350 239440 151720 243740 262160 316650 302310 290360 311890 314100 297770 359360 376020 344710 310610 348540 323370 381690 371890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 589020000 26656 4542 25034 50069;50070 40375;40376 40376 2 9606 Homo sapiens -0.06572635201587218 TFVSSFMSELSPVR Unmodified 1585.781 0.78102903 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3-3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 0 4 0 1 64.32 64.328 3 0.023139 20140 20230619_1883_Aki_TMTPro18x_K_F4 54.95 42.737 11267 10137 11883 12242 11291 11251 10837 12074 13447 17735 15047 12273 18142 12548 13332 19048 13802 17323 10429 9295.7 12010 12180 11755 11478 11045 12423 13644 17447 15474 12729 18167 13296 13701 18921 13225 16459 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4089900 26657 1140 25035 50071 40377 40377 1 9606 Homo sapiens 0.011569754347192429 TFVVQGFGNVGLHSMR Oxidation (M) 1763.8777 0.87772338 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;P00367-3;A0A804HJD7;B3KT18;P00367-2;P49448;A0A140VK14;Q59FQ4;Q14400;Q9BSD0 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase;Glutamate dehydrogenase 2, mitochondrial yes no 0 1 0 5 0 1 52.333 52.407 3 0.0023844 14754 20230619_1885_Aki_TMTPro18x_K_F5 70.334 57.354 50451 42944 44679 52770 51961 54191 55396 60020 66686 48968 63425 51738 58705 40976 56974 59747 54638 56885 46618 39392 46023 52506 53490 54829 56009 60609 67081 50180 64941 52118 59914 43651 57855 59567 52315 54052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151920000 26658 2542 25036 50072 40378 40378 1547 1 9606 Homo sapiens 0.026339627145034683 TGAAPIIDVVR Unmodified 1110.6397 0.63970816 3592 Q6NZ52;P46776;E9PJD9;Q9BQQ5;E9PLL6;E9PLX7 RPL27A;L27a 60S ribosomal protein L27a yes no 0 0 0 7 0.816 1 1 1 50.933 51.011 2 8.258E-05 13979 20230619_1887_Aki_TMTPro18x_K_F7 139.43 88.087 1164400 961560 1056000 1160100 1074100 1272100 1223300 1271300 1383100 1368500 1277000 1244600 1532300 1261000 1166900 1608300 1297300 1473400 1075900 881980 1082800 1156800 1119300 1277600 1229900 1301100 1396400 1374200 1325900 1270400 1538200 1318700 1202700 1601700 1241200 1400200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3682299999.9999995 26659 3592 25037 50073;50074;50075 40379;40380 40380 2 9606 Homo sapiens 0.08881389914404281 TGADTTAAGPLFQQR Unmodified 1532.7583 0.75831975 1105 A0A0S2Z4V5;A0A0S2Z556;O60828-5;O60828-2;O60828;O60828-4;H7C053 PQBP1 Polyglutamine-binding protein 1 yes no 0 0 0 6.5 0.5 1 1 47.074 47.158 2 1.3083999999999998E-19 12247 20230619_1887_Aki_TMTPro18x_K_F7 187.31 165.94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26660 1105 25038 50076;50077 40381;40382 40382 2 9606 Homo sapiens 0.013250923614577914 TGAELVTCGSVLK Unmodified 1333.6912 0.69115139 4185 Q86U75;Q9HCN8 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes no 0 0 0 8 0 1 52.787 52.862 2 8.3189E-08 14782 20230619_1888_Aki_TMTPro18x_K_F8 143.96 100.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26661 4185 25039 50078 40383 40383 1 9606 Homo sapiens 0.03765345826150224 TGAESISLLELCR Unmodified 1447.7341 0.73407884 577 A0A024R9J0;O60216;B3KUT8;E5RG18 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 0 0 6 0 1 58.376 58.445 2 8.768400000000001E-69 17448 20230619_1886_Aki_TMTPro18x_K_F6 345.97 297.88 101090 88786 90940 97621 75328 91626 98087 88397 105380 109990 96237 94434 109860 96450 98862 133480 112470 106630 93438 81349 93041 97817 80177 93056 97805 91153 106640 109550 99765 96697 111220 101340 101670 131940 107430 101580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89273000 26662 577 25040 50079 40384 40384 1 9606 Homo sapiens 0.028121158835801907 TGAFALPILNALLETPQR Unmodified 1924.0782 0.078197327 633 Q53GJ1;Q9H4E3;A0A024RAS3;Q9H0S4-2;Q9H0S4;A4UCU0;B4DYP6 E4-DBP;hCG_27698;DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 0 0 0 5.5 0.5 1 1 66.954 66.996 3 2.6464E-16 21130 20230619_1886_Aki_TMTPro18x_K_F6 173.28 144.95 5566.1 3441.9 4924.6 5182 2459.2 5500.5 7067.4 4313 5085.2 5320.7 5779.2 6026.9 5531.8 4981.5 3943.6 6134.8 6515.4 6041.3 5134.1 3168.7 5026.5 5091.5 2889.5 5501.5 6791.2 4525.3 5316 5345.4 5887.2 6050.5 5582.4 5231.9 4192 6134.7 6205.8 5740.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38617000 26663 633 25041 50080;50081 40385;40386 40386 2 9606 Homo sapiens 0.15312135582962583 TGAFEPAEASVNPQDLQGSLQELK Unmodified 2528.2395 0.23946159 2638 B4E303;B4E074;Q9NVX2;A0A0A0MRH0;K7EN33;Q9NVX2-2 NLE1 Notchless protein homolog 1 yes no 0 0 0 5 0 1 62.339 62.386 3 1.9615E-34 19004 20230619_1885_Aki_TMTPro18x_K_F5 142.93 121.93 30059 28225 30795 29478 29973 37845 31833 31998 42283 37701 38604 41746 42063 38525 36108 49037 44486 53283 27826 25843 31206 29791 31302 37500 32317 33242 42332 37940 39947 42096 42567 40396 37359 49303 42543 50531 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189310000 26664 2638 25042 50082 40387 40387 1 9606 Homo sapiens 0.03647143576972667 TGAFSIPVIQIVYETLK Unmodified 1878.0503 0.050251242 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;Q92499-2;A0A7I2YQ77;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8;A0A7I2V4Q0;A0A7I2YQD0 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 5 0 1 68.129 68.171 3 1.244E-06 21391 20230619_1885_Aki_TMTPro18x_K_F5 114.31 99.337 4070.3 2811.7 3982 2861.4 2320.2 2940 4401.2 5062.6 3632 4095.5 2934.2 3401.6 4377.8 4409.2 4929.5 4734.9 3286 5021.6 3759.4 2577 4021.8 2893.9 2597.3 3015.2 4296.3 4994.6 3720.3 4166.6 3113.8 3519.5 4451.5 4530.7 4911.8 4769.9 3171.9 4760.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25754000 26665 1661 25043 50083 40388 40388 1 9606 Homo sapiens 0.14634812602866987 TGAIVDVPVGEELLGR Unmodified 1623.8832 0.88318591 3504 V9HW26;P25705;P25705-2;K7EK77;B4DGW3;K7ERX7;K7EJP1;K7EQH4 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 4 0 1 61.886 61.89 2 0.002192 19112 20230619_1883_Aki_TMTPro18x_K_F4 73.848 39.469 43457 39526 32077 42509 40143 40995 47709 37625 63718 52654 56871 48791 39497 46241 64040 35974 58042 52969 40124 36204 33719 42664 41288 41524 48107 39110 63672 52335 57895 49593 42113 47219 64199 37364 55557 50148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 483300000 26666 3504 25044 50084 40389 40389 1 9606 Homo sapiens 0.09619964777994028 TGALEGPEVDGFVK Unmodified 1417.7089 0.70890994 3326 O76038;A0A994J4C2 SCGN Secretagogin yes no 0 0 0 4 0.707 1 2 1 56.069 56.098 2;3 4.1295E-06 16721 20230619_1883_Aki_TMTPro18x_K_F4 145.55 116.83 110890 99294 105330 92999 94985 101330 98582 103400 130430 178870 160040 149820 196800 147700 167760 216930 178650 183250 102560 90850 107210 94669 99621 101980 100260 107450 132540 175790 164330 153430 198170 156160 171970 214840 170860 174390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 607670000 26667 3326 25045 50085;50086;50087;50088 40390;40391 40390 2 9606 Homo sapiens 0.016763843526405253 TGAPQYGSYGTAPVNLNIK Unmodified 1949.9847 0.98469087 1861 Q6UN15;A0A994J3L0;A0A994J3K5;A0A994J3M0;A0A994J3Q0;A0A994J442;A0A994J3S6;A0A994J6N5;A0A994J3S0;A0A994J453;A0A994J474;A0A994J464;A0A994J6R0;A0A994J458;A0A994J3I9;A0A994J469;A0A994J6C6;A0A994J6D6;A0A994J3L5;A0A994J6B4;A0A994J6P0;A0A994J6Q2;A0A994J3R0;A0A994J3J1;A0A994J6Q5;A0A994J6B8;A0A994J3K1;A0A994J3R5;Q6UN15-4;H0Y8P7;A0A994J6P3;A0A994J6E0;A0A994J6D3;A0A994J3P6;A0A994J3Q5;A0A994J438;A0A994J6E2;Q6UN15-3;Q6UN15-5;A0A994J6P8;A0A994J6C9;A0A994J6C2;A0A0B4J203;A0A994J3J6;A0A994J448;A0A994J6R4;A0A994J3T0 FIP1L1 Pre-mRNA 3'-end-processing factor FIP1 yes no 0 0 0 2.5 0.5 1 1 56.119 56.146 3 1.9263E-10 16849 20230619_1882_Aki_TMTPro18x_K_F3 133.93 120.3 42051 33699 36491 43939 40939 46499 44812 41958 46883 63018 53531 55353 65078 53209 50405 70976 64282 71727 38836 30938 37646 43549 42295 46721 45022 43746 48014 62307 55118 56465 65351 55921 52396 71012 61422 68091 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95644000 26668 1861 25046 50089;50090 40392 40392 1 9606 Homo sapiens 0.04769791409921709 TGASFQQAQEEFSQGIFSSR Unmodified 2204.0134 0.013424818 1239 Q6IBK3;A8K769;A0A140VK92;O15127 SCAMP2 Secretory carrier-associated membrane protein 2 yes no 0 0 0 7.33 0.471 2 1 61.794 61.827 3 1.9188E-05 18557 20230619_1888_Aki_TMTPro18x_K_F8 92.932 72.883 41503 33088 35956 31019 34948 44605 40433 40640 48916 28782 29770 29655 29190 22273 37659 35637 30375 31901 38328 30287 36950 31711 36602 43982 40704 41461 48521 29785 31441 29844 30199 23931 37733 35392 29143 30334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189310000 26669 1239 25047 50091;50092;50093 40393;40394 40394 2 9606 Homo sapiens -0.040421357516606804 TGASVLNK Unmodified 788.43922 0.43921744 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;Q92499-2;A0A7I2YQ77;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8;A0A7I2V4Q0;A0A7I2YQD0 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 8 0 1 42.231 42.234 3 0.070923 10344 20230619_1888_Aki_TMTPro18x_K_F8 45.382 21.825 23125 17657 23313 19426 22726 25660 23676 25278 29553 20262 24343 23000 23221 18200 27287 21782 23956 24564 21375 16187 23634 19573 23691 25467 24006 25706 29531 20843 25173 23075 23916 19132 27461 22005 22957 23299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8017000 26670 1661 25048 50094 40395 40395 1 9606 Homo sapiens 0.03653540317623083 TGCETVDAVQER Unmodified 1363.6038 0.60379294 1255 O94901-9;A0A146IHP0;E9PHI4;A7MCZ7;O94901;O94901-5;H0Y742;A4D2Q0;O94901-6;H0Y6N5;B4E278;A0A8I5G938;H7C2K3 SUN1;UNC84A SUN domain-containing protein 1 yes no 0 0 0 2 0 1 37.235 37.295 2 5.1988E-05 8615 20230619_1881_Aki_TMTPro18x_K_F2 127.42 117.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26671 1255 25049 50095 40396 40396 1 9606 Homo sapiens -0.06346480115416853 TGCIGAK Unmodified 705.34796 0.34795959 3733 Q5VVC8;Q08ES8;Q5VVD0;P62913-2;P62913 RPL11 60S ribosomal protein L11 yes no 0 0 0 7.5 0.5 1 1 37.396 37.421 2 0.072565 8467 20230619_1888_Aki_TMTPro18x_K_F8 76.035 42.677 26103 19902 40436 37449 68591 64293 40220 61335 42516 25879 38386 45487 23733 29917 41835 20869 39784 35806 24236 18361 40267 36706 68130 62887 42334 61833 42978 28643 39020 44738 25616 30855 41990 22028 38057 33865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45319000 26672 3733 25050 50096;50097 40397 40397 1 9606 Homo sapiens -0.016500466513548417 TGCNVLLIQK Unmodified 1144.6274 0.62742892 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 2.5 0.5 1 1 52.624 52.67 3 0.00071591 15620 20230619_1881_Aki_TMTPro18x_K_F2 96.015 75.113 388670 311630 354700 328970 360380 400280 399240 338500 432570 242690 233160 194730 223520 159750 286380 229980 233540 179340 359090 285520 363080 331930 375020 398050 401100 347700 430260 249360 248120 198910 231260 169770 286850 227350 223590 171070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 973090000 26673 3622 25051 50098;50099 40398;40399 40398 2 9606 Homo sapiens 0.06090030179711903 TGCTFPEKPDFH Unmodified 1434.6238 0.6238001 1168 Q86U79;A0A140VJE0;P55263-2;P55263;P55263-3;P55263-4;A0A5F9ZHJ1 ADK Adenosine kinase yes no 0 0 1 5.5 0.5 1 1 47.497 47.575 3 0.00026882 12843 20230619_1886_Aki_TMTPro18x_K_F6 98.156 88.368 246580 196200 228420 237370 212290 267950 252070 261730 265330 250820 288440 257020 285460 238690 252490 288800 305280 261300 227830 179990 233400 236780 223140 268400 252370 267490 270380 254280 294490 260250 289880 249440 260430 287790 291270 248640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295260000 26674 1168 25052 50100;50101 40400 40400 1 9606 Homo sapiens -0.0761268438479874 TGDAISVMSEVAQTLLTQDVR Unmodified 2233.126 0.12601173 734 Q9HBM8;Q71VH6;B4DRH1;A0A024RCV5;Q99943 AGPAT1 1-acyl-sn-glycerol-3-phosphate acyltransferase;1-acyl-sn-glycerol-3-phosphate acyltransferase alpha yes no 0 0 0 7.5 0.5 1 1 67.675 67.695 3 4.9582E-05 21031 20230619_1888_Aki_TMTPro18x_K_F8 83.776 58.186 1771.4 1801.9 1978 1573.5 1867.1 2232.2 2126.2 1455.4 1955.6 2162.6 870.51 2711 1215.1 1952.3 2556.1 2932.5 1912.6 2144.9 1642 1647.1 1988.4 1618.3 1955 2190.8 2121.9 1561.4 1963.3 2164.6 975.6 2695 1300 2084.3 2542.4 2886.3 1837.8 2044.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5643000 26675 734 25053 50102;50103 40401 40401 1 9606 Homo sapiens 0.05877376930220635 TGDFQLHTNVNDGTEFGGSIYQK Unmodified 2527.1615 0.16154562 62 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;P45880-2;P45880-1;B4DKM5 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 6 0.816 1 1 1 54.951 55.02 4 3.5785E-44 16018 20230619_1886_Aki_TMTPro18x_K_F6 236.29 219.36 146630 120730 150700 181580 143200 161410 172360 172590 179090 192480 182290 192630 221850 187710 157230 206370 193750 208910 135620 111010 152840 178020 150110 164940 172350 176130 182340 193430 188620 195340 222100 194800 163310 207100 185130 198350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 673330000 26676 62 25054 50104;50105;50106 40402 40402 1 9606 Homo sapiens -0.04094869288474001 TGDPQETLRR Unmodified 1171.5945 0.59454889 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 1 4 0.816 1 1 1 30.765 30.841 3 0.00031632 5837 20230619_1883_Aki_TMTPro18x_K_F4 101.93 79.731 116770 89820 117340 123080 146070 130690 127410 137190 142510 117820 154420 152470 147530 125820 136730 118070 173140 140300 107940 82519 119570 121660 148710 131780 130080 139190 144710 121170 157550 152310 150310 130260 141110 120110 165080 133150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 194550000 26677 349;3906 25055 50107;50108;50109 40403;40404;40405 40404 3 9606 Homo sapiens 0.015615393812367984 TGDTGMLPANYVEAI Unmodified 1550.7287 0.72865911 157 A0A024R1S8;Q14847;A8K1D2;Q14847-3 LASP1 LIM and SH3 domain protein 1 yes no 0 0 0 3.5 0.5 1 1 63.813 63.833 2 0.0031429 19941 20230619_1883_Aki_TMTPro18x_K_F4 97.456 89.811 37165 28818 34913 36653 31161 37417 38114 38273 42979 44319 39443 48515 50911 44549 46482 61354 56369 62965 34337 26453 35611 36385 32882 37790 38184 39206 43401 44592 41207 48925 51412 46969 47973 61423 53884 59763 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 140530000 26678 157 25056 50110;50111 40406;40407 40407 2 9606 Homo sapiens -0.02467607698872598 TGEDEDEEDNDALLK Unmodified 1691.701 0.70098361 4349 Q96FV9 THOC1 THO complex subunit 1 yes yes 0 0 0 1 0 1 48.915 48.915 3 0.0009226 13915 20230619_1880_Aki_TMTPro18x_K_F1 75.764 71.373 79450 67801 101260 103790 102240 110600 104950 104980 123240 118420 131260 130710 146440 127250 119300 149980 157800 147840 73652 62347 101070 101900 106130 111160 106270 108010 124840 119370 134940 132080 147750 132560 124080 150140 150540 140480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55097000 26679 4349 25057 50112 40408 40408 1 9606 Homo sapiens -0.11719884216063292 TGEEDEEEFFCNR Unmodified 1660.6311 0.63112991 3613 P49792;Q13073 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 1 0 1 49.607 49.607 2 1.267E-73 14188 20230619_1880_Aki_TMTPro18x_K_F1 309.77 309.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26680 3613 25058 50113 40409 40409 1 9606 Homo sapiens -0.17276041365698802 TGEEIFGTIGMRPNAK Unmodified 1719.8614 0.86140461 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3S6H7G3;A0A3Q8ATF5;Q5U8W9;A0A3Q8APW9;A0A3Q8B022;A0A3S6H7Y4;A0A3Q8B027;A0A3Q8BCJ2;A0A3Q8BCI7;A0A3S6H824;A0A3S6H950;A0A3S6H942;Q99873-5;A0A3S6H7K8;A0A3Q8AIS2;A0A3Q8APY3;A0A3S6H960;A0A3Q8B4M4;A0A3S6H8B5;A0A3S6H7X9;A0A3S6H7W7;A0A3Q8B9M7;A0A3Q8AX88;A0A3Q8ATG4;A0A3Q8AIS8;A0A3S6H767;A0A3Q8AM22;A0A3S6H761 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 yes no 0 0 1 1.5 0.5 1 1 53.228 53.244 3 2.0479E-14 15643 20230619_1880_Aki_TMTPro18x_K_F1 178.56 160.85 318200 278020 289510 292930 272250 300500 312430 318330 339360 386460 350010 299690 393760 320570 332560 421030 354930 327380 294130 254640 296240 294910 285300 303850 313630 325710 344980 384220 360160 309150 397470 335320 340970 416010 339190 312040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 763230000 26681 1536 25059 50114;50115 40410;40411 40411 2 9606 Homo sapiens 0.030268367577946265 TGEEINFGK Unmodified 993.47673 0.47672516 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2;Q05D78 MRE11A Double-strand break repair protein MRE11A yes no 0 0 0 4 0 1 48.153 48.193 2 0.0074898 13180 20230619_1883_Aki_TMTPro18x_K_F4 89.698 29.845 74017 59457 67516 69097 78897 81569 78749 77605 97222 95237 104050 100230 94610 90399 88683 114930 108560 110940 68384 54523 69299 69170 81045 81475 79984 80018 98265 95473 105980 101240 96665 94816 91530 114800 103700 105410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86350000 26682 229 25060 50116 40412 40412 1 9606 Homo sapiens -0.020274132074177942 TGEGFLCVFAINNTK Unmodified 1669.8134 0.81339179 3099;636;1729 I1SRC5;Q14015;Q14014;L7RSL8;P01116;A0A221ZRZ4;A0A8I5KUB5;A0A8I5KQ21;A0A3G1LBH1;A0A024RAV5;P01116-2;A0A804HJ06;X5D945;P01112-2;P01112;Q92468 KRAS;HRAS;c-bas/has GTPase KRas;GTPase KRas, N-terminally processed;GTPase HRas;GTPase HRas, N-terminally processed no no 0 0 0 2 0 1 63.053 63.063 3 4.8371E-11 20000 20230619_1881_Aki_TMTPro18x_K_F2 163.99 152.01 47365 40317 47950 50704 36831 38386 40539 41549 44824 51564 63914 55232 56543 55297 55109 63221 99871 71633 43812 36992 48497 50198 39219 39841 40846 42523 46182 51678 64295 55959 57975 57440 58563 63848 94927 68051 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89297000 26683 3099;636;1729 25061 50117 40413 40413 1 9606 Homo sapiens 0.005277628377371002 TGEGFYK Unmodified 800.37047 0.37046918 1026 Q16836-2;Q16836-3;Q16836;E9PF18;A0A0D9SFP2;B3KTT6;A0A140VK76;B2RB06;A0A0A0MSE2;A0A804HLB5;A0A1W2PNM1;A0A1W2PQ78 HADH Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 43.824 43.909 2 0.020601 11179 20230619_1886_Aki_TMTPro18x_K_F6 111.04 65.723 553300 436990 505560 497230 637910 681730 629640 616670 860580 637340 863210 868960 778850 778560 732190 782400 1024500 943160 511150 400660 519480 499770 652240 674000 642320 635000 862600 650660 881750 868760 796490 805820 761720 795100 976860 894410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 348610000 26684 1026 25062 50118;50119 40414;40415 40415 2 9606 Homo sapiens -0.03770123982098994 TGENVEDAFLEAAK Unmodified 1492.7046 0.70455285 492 A0A024R845;P61106;X6RFL8;A0A994J451 RAB14 Ras-related protein Rab-14 yes no 0 0 0 3.5 0.5 1 1 60.735 60.751 3 2.0727E-16 18708 20230619_1882_Aki_TMTPro18x_K_F3 201.76 171.82 95921 80925 92757 103840 75091 98437 105270 100130 119070 118470 123170 125860 124760 122630 126060 144140 133880 168550 88689 74268 94319 102900 80339 99949 104830 102710 120670 118990 126290 127360 127460 127710 128710 145800 128260 159700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223980000 26685 492 25063 50120;50121 40416 40416 1 9606 Homo sapiens -0.02209124860905831 TGEYPVPLIR Unmodified 1143.6288 0.62880913 1063 P11310-2;P11310;Q5HYG7;Q5T4U5;A0A0S2Z366;B4DWX6;B7Z9I1;F6YB23;A0A7P0T932;A0A7P0TB51;A0A7P0TA63;A0A7P0T8J9;A0A7P0TBD1;A0A7P0TAB2;A0A7P0TA39;E9PJM9 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 7.5 0.5 1 1 52.254 52.33 2 0.00055249 14607 20230619_1887_Aki_TMTPro18x_K_F7 120.87 80.765 339240 319390 326930 367070 406590 436170 430360 420160 437420 426960 428220 413660 468410 379350 438410 469470 433010 477110 313890 292690 334610 367730 416490 435540 432690 430480 445000 430740 441530 419540 475200 397360 446220 470670 414660 452910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 291330000 26686 1063 25064 50122;50123 40417;40418 40417 2 9606 Homo sapiens 0.06273987540112103 TGFAVIHDAAR Unmodified 1156.5989 0.59890598 3584 P42773;Q6ICV4 CDKN2C Cyclin-dependent kinase 4 inhibitor C yes no 0 0 0 7 0 1 40.778 40.846 3 5.5257E-09 9587 20230619_1887_Aki_TMTPro18x_K_F7 137.92 103.39 91697 65668 82749 75029 87956 102650 96975 82717 112730 82476 88340 90447 83783 73683 88478 95435 94180 89925 84655 60236 84847 75389 91273 101250 97694 85905 112870 83689 91621 90910 85916 77682 90241 95230 90026 85485 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173600000 26687 3584 25065 50124 40419 40419 1 9606 Homo sapiens 0.02687048594771113 TGFFEFQAAK Unmodified 1144.5553 0.55530983 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;Q9P2J5-3;Q9HAM7;Q9NPU8;Q9NVC0 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 2.8 2.64 2 2 1 59.275 59.288 2;3 0.00048934 18173 20230619_1880_Aki_TMTPro18x_K_F1 142.98 125.25 213740 172950 192620 203330 181540 202340 198000 195880 229710 208070 211510 210280 232790 190690 256160 243630 227550 219580 197460 158610 197310 202880 189990 204580 199720 200940 231480 209740 218890 212790 237950 200150 258420 242700 217940 208850 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 397790000 26688 1603 25066 50125;50126;50127;50128;50129 40420;40421;40422 40420 3 9606 Homo sapiens -0.011185609023414145 TGFQAVTGK Unmodified 907.47633 0.47633123 2657 Q6IBR8;B5BU01;P20042;Q96I16 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 1.5 0.5 2 2 46.224 46.264 2;3 0.00010476 12836 20230619_1880_Aki_TMTPro18x_K_F1 154.85 90.642 287470 253210 263570 289970 290090 319650 298990 278160 394950 316310 346270 348080 374960 278830 340030 396850 403130 359820 265760 232080 270290 290220 299680 320110 303840 288170 394760 318800 358800 349730 379940 296240 350160 394660 384810 342310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 620560000 26689 2657 25067 50130;50131;50132;50133 40423;40424 40423 2 9606 Homo sapiens 0.018892118633857535 TGFVPSNYVER Unmodified 1267.6197 0.619701 1094 A0A0S2Z4E4;B2R6S4;A0A0S2Z4Y3;P16333;C9K098;C9JVV5;C9J869;A0A0S2Z4D7;C9J0K5;H7C5C7 NCK1 Cytoplasmic protein NCK1 yes no 0 0 0 7 0 1 48.215 48.302 2 0.0011255 12813 20230619_1887_Aki_TMTPro18x_K_F7 101.12 61.817 383280 303260 324270 351180 357040 407010 385470 389330 478460 355210 325050 317850 368240 300530 361730 425360 418160 357110 353890 278100 334990 351510 369420 406930 389780 398000 475820 359960 342630 324040 374240 317170 371390 421440 399130 340130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59582000 26690 1094 25068 50134 40425;40426 40426 2 9606 Homo sapiens -0.0034040581620047305 TGGADQSLQQGEGSKK Unmodified 1589.7645 0.76452734 860 A0A087WYR0;P09132 SRP19 Signal recognition particle 19 kDa protein yes no 0 0 1 5.5 0.5 1 1 37.283 37.364 3 0.00012273 8432 20230619_1885_Aki_TMTPro18x_K_F5 92.773 80.796 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26691 860 25069 50135;50136 40427;40428 40427 2 9606 Homo sapiens -0.006764341976804644 TGGAYGEDLGADYNLSQVCDGK Unmodified 2288.9856 0.98555509 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 5.25 0.829 1 1 2 56.746 56.793 3 2.1561E-23 16956 20230619_1883_Aki_TMTPro18x_K_F4 179.87 170.06 123980 100820 142070 126700 68569 94611 100240 108330 136850 182580 181650 163810 198780 172430 151740 226270 187110 177730 114770 92515 141610 125480 78058 98410 100560 111720 139300 179930 184820 167570 200130 180350 157490 223590 178610 169360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1439500000 26692 3606 25070 50137;50138;50139;50140 40429;40430;40431 40429 3 9606 Homo sapiens -0.10737826794002103 TGGLEIDSDFGGFR Unmodified 1469.6787 0.67867245 1627 O95831;O95831-3;A0A6Q8PFM5;A0A6Q8PG15;A0A6Q8PFE1;A0A7I2PK44;A0A6Q8PHJ9;A0A6Q8PHC0;A0A6Q8PFA7;A0A6Q8PFS4;A0A6Q8PFQ8;A0A7I2RLJ8;O95831-2;E9PMA0;A0A140VK04;O95831-5 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 0 3.5 0.5 1 1 59.478 59.494 2 7.7934000000000005E-47 18108 20230619_1883_Aki_TMTPro18x_K_F4 312.78 280.84 109010 95520 104830 101570 76262 92485 107920 101550 111440 139910 131430 131500 149390 127390 131520 166820 151770 160530 100810 87494 106400 102050 82380 94456 107140 104170 114260 139040 134700 133770 151060 133640 135370 166540 145080 152510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112570000 26693 1627 25071 50141;50142 40432;40433 40433 2 9606 Homo sapiens -0.037379743125711684 TGGTQTDLFTCGK Unmodified 1384.6293 0.62927941 1319 P23193;A0A384MTX4;A0A1W2PPZ5;B7Z4W0;P23193-2;A0A1W2PRL9;B7Z4S1;Q6IB64;Q15560-2;A0A0A0MT58;Q15560;Q5JRI7 TCEA1;TCEA2 Transcription elongation factor A protein 1;Transcription elongation factor A protein 2 yes no 0 0 0 7 0 1 49.107 49.192 3 6.6466E-07 13188 20230619_1887_Aki_TMTPro18x_K_F7 125.89 112.3 213080 181420 190780 190650 212150 237300 231650 225120 268570 258530 257710 228780 299240 225690 238230 323270 265120 237030 196900 166180 196000 192500 219310 236210 233550 231650 271150 258650 266500 233770 301010 238090 245270 318230 253210 226150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1051199999.9999999 26694 1319 25072 50143 40434 40434 1 9606 Homo sapiens -0.04765005592980742 TGGYLTESGYVNLQR Unmodified 1656.8107 0.81074925 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 0 0 7.5 0.5 1 1 51.451 51.528 3 1.5311E-07 14175 20230619_1888_Aki_TMTPro18x_K_F8 122.2 84.229 79120 61160 66762 86262 110200 132120 99534 99224 169520 242640 464200 689220 290030 347980 482830 279500 399980 523600 73040 56206 69642 85562 111000 129340 103280 107680 180150 250730 456540 666640 311120 366030 481940 296330 384360 494280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228150000 26695 2350 25073 50144;50145 40435 40435 1 9606 Homo sapiens 0.008616307044349014 TGHSGTLDPK Unmodified 1011.4985 0.49852324 1807 O60832;A0A8Q3WLC8;A0A8Q3SIY6;A0A8Q3SIS9;A0A8Q3SJE8;A0A8Q3WLD1;A0A8Q3WLG7;A0A8Q3SIX2;C9IYT0;O60832-2;A0A8Q3WLE4;U5UA77;A0A8Q3WLW8;H7C2Q2;U5U7S7 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 0 0 0 4.5 0.5 1 1 33.07 33.14 3 7.3624E-05 6828 20230619_1885_Aki_TMTPro18x_K_F5 123.96 97.442 42735 6519.4 53293 53664 88705 58585 56100 74784 58147 47101 77446 83042 61749 68820 59044 30440 73413 77303 39396 6420.1 53734 50304 88116 59227 58595 74494 59843 50150 77898 82121 63494 69401 60717 33940 70129 72912 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55648000 26696 1807 25074 50146;50147 40436 40436 1 9606 Homo sapiens -0.006766084588662125 TGHSLLHTLYGR Unmodified 1353.7153 0.71533272 21 A0A024QZ30;P31040;P31040-2;D6RFM5;Q0QF12;B4DYN5;A0A494C1T6 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 4 0 1 33.082 33.139 4 2.7992E-05 6769 20230619_1883_Aki_TMTPro18x_K_F4 99.539 90.089 18694 34053 30173 19479 30229 43867 27820 32964 23832 21057 32983 35002 24285 25257 41873 16770 49054 31473 17506 31010 29645 21255 31369 42272 28108 34076 24841 22340 33081 34552 25938 25916 42516 17896 46743 29802 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12029000 26697 21 25075 50148 40437 40437 1 9606 Homo sapiens 0.052623670947014034 TGHWLNHGK Unmodified 1048.5203 0.52026173 4184 Q86U44;B3KSH0;Q86U44-2 METTL3 N6-adenosine-methyltransferase 70 kDa subunit yes no 0 0 0 2.5 0.5 1 1 34.041 34.102 4 0.0014055 7320 20230619_1881_Aki_TMTPro18x_K_F2 98.033 76.569 34012 9023.7 31189 36240 43357 26575 37398 39733 51232 43257 46940 47790 49441 41896 30212 47062 41675 49782 31295 8531.4 32103 34189 43773 27911 38478 39780 51227 43669 48442 48109 49472 43687 31790 47313 39820 47225 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45140000 26698 4184 25076 50149;50150 40438 40438 1 9606 Homo sapiens -0.0020575891962835158 TGHYLTVK Unmodified 917.49707 0.49706667 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 1.67 0.471 1 2 39.557 39.592 3 6.7725E-06 9573 20230619_1881_Aki_TMTPro18x_K_F2 144.12 80.642 150880 49281 130700 144200 193050 153020 159520 145620 181660 155790 176210 160280 168890 152210 141400 173150 201690 161240 138840 46093 135380 137730 194290 153880 163430 149610 183560 157120 180590 162330 171430 158320 147750 172930 192110 153420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105690000 26699 3246 25077 50151;50152;50153 40439;40440 40440 2 9606 Homo sapiens 0.03501802243022212 TGIDLGTTGR Unmodified 989.51417 0.5141733 1482 Q14498;Q14498-2;B4E1M7;A0A384NQ03;Q68DD9;B3KWX7;B4DLM0;Q6N037;B4DRA0;E1P5S2;Q6MZY7;B7Z4L7;Q14498-3;Q7Z3L0;H0Y4X3;G3XAC6;A0A0U1RQH7;A0A0U1RQW2;A0A087X122 RBM39;DKFZp781C0423;DKFZp686A11192;RNPC2;DKFZp686C17209;DKFZp781I1140 RNA-binding protein 39 yes no 0 0 0 5.5 0.5 1 1 42.093 42.182 2 5.4141E-07 10400 20230619_1886_Aki_TMTPro18x_K_F6 186.41 125.97 346970 261300 317880 340740 383090 384500 396880 388010 462970 366070 437690 406800 438610 350310 367220 456330 469600 397740 320450 239960 326430 338150 392950 385620 401340 395580 466520 372540 450010 409570 444180 368790 380780 453350 447820 378660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 758510000 26700 1482 25078 50154;50155 40441;40442 40442 2 9606 Homo sapiens 0.018996780582028805 TGIEQGSDAGYLCESQK Unmodified 1841.8102 0.8101569 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5;A0A2R8YG21 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 3 0.816 1 1 1 47.983 48.047 3 3.8048E-30 13264 20230619_1882_Aki_TMTPro18x_K_F3 229.68 212.8 475600 448330 500960 488900 580020 533570 570370 581800 689440 711090 750810 753390 759960 666250 663810 822380 879420 842820 440390 410650 507780 491340 595170 537750 579450 594360 698310 712920 767760 760080 771110 698320 689450 824570 839080 800430 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2257000000 26701 2908 25079 50156;50157;50158 40443;40444;40445;40446 40444 4 9606 Homo sapiens -0.07707576797588445 TGIPLNVLPK Unmodified 1050.6437 0.64373091 4353 Q96GA3 LTV1 Protein LTV1 homolog yes yes 0 0 0 3 0 1 58.55 58.581 3 0.014643 17832 20230619_1882_Aki_TMTPro18x_K_F3 69.979 36.754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26702 4353 25080 50159 40447 40447 1 9606 Homo sapiens 0.12043479408134772 TGIPTLGK Unmodified 785.4647 0.46470391 1651 A0A7I2V2U6;B2R7W0;P13995;P13995-2;B8ZZU9;A0A7I2YQD4;B4DY35 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes no 0 0 0 2 0 1 49.417 49.475 2 0.0069758 14197 20230619_1881_Aki_TMTPro18x_K_F2 117.04 78.23 186040 162000 155250 195800 178740 189660 188430 188160 215740 232000 270240 256960 234390 192100 279720 223160 223530 188190 171860 148570 160860 194850 184110 192270 190310 193550 220410 232790 273140 257500 242350 201870 280220 222040 214170 179250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130760000 26703 1651 25081 50160 40448 40448 1 9606 Homo sapiens 0.0633901484004582 TGISDVFAK Unmodified 936.49165 0.49164694 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;B3KM80;Q6ZS99;A0A7I2V2S8 NCL Nucleolin yes no 0 0 0 5.33 3.09 1 1 1 53.744 53.79 2;3 0.00041505 15215 20230619_1887_Aki_TMTPro18x_K_F7 154.12 77.344 952080 752710 808080 865320 833370 930920 938080 951390 1018500 1084400 1091200 1051400 1224400 1034700 1098600 1230400 1104300 1086900 879070 690210 833600 865760 866880 937000 942460 973950 1036500 1087800 1121800 1068700 1239200 1078000 1120400 1225000 1056400 1033900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 13799000000 26704 1658 25082 50161;50162;50163 40449;40450;40451 40450 3 9606 Homo sapiens 0.0208607866057946 TGIYEEK Unmodified 838.40725 0.40724861 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2;A0A7P0Z484;A0A7P0TAR9;A0A7P0Z4H2;Q16094;Q6ZP56;D6RFL1 CANX Calnexin yes no 0 0 0 3 0.816 1 1 1 41.933 41.994 2 0.010873 10470 20230619_1882_Aki_TMTPro18x_K_F3 123.69 72.724 1140700 632760 1336700 1357800 1604800 1753500 1576600 1691600 1748300 1381100 2044600 2264400 1715700 1670800 1876600 791580 2362100 2269000 1054200 585880 1345900 1315600 1644200 1740100 1597200 1724000 1780700 1439400 2071300 2235800 1770800 1697400 1925900 895970 2254700 2139800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 825710000 26705 1700 25083 50164;50165;50166 40452;40453 40452 2 9606 Homo sapiens -0.018418721561829443 TGKPEEASLDSR Unmodified 1288.6259 0.62590859 919 B2RB99;B4DXL5;A0A0A0MQR2;Q9BY42;A2A2L5 RTFDC1 Protein RTF2 homolog yes no 0 0 1 3 0 1 36.466 36.521 3 0.037074 8177 20230619_1882_Aki_TMTPro18x_K_F3 54.309 41.108 69055 43314 59062 58358 68414 82304 73332 67765 102690 84922 91091 84239 90614 76733 75606 74021 106510 83994 63684 39821 60978 57999 70586 81045 74524 70681 102430 84954 93908 85273 91816 79281 78827 75006 101450 79755 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82903000 26706 919 25084 50167 40454 40454 1 9606 Homo sapiens -0.006859323753360513 TGKPMINLYTDK Unmodified 1379.7119 0.71188683 4307 Q92804-2;Q92804;B4E312;A0A0J9YYE0 TAF15 TATA-binding protein-associated factor 2N yes no 0 0 1 2.5 0.5 1 1 50.978 51.036 3 0.00018286 14934 20230619_1881_Aki_TMTPro18x_K_F2 106.52 75.297 312130 304460 344060 301690 367000 424420 396970 374550 379090 153980 178900 141600 151340 123860 253940 140280 161940 108150 289210 278610 347000 306780 380110 418760 397850 380190 378450 167450 191800 144030 160190 129190 250690 139310 155460 103250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 165530000 26707 4307 25085 50168;50169 40455;40456 40455 2 9606 Homo sapiens 0.03721936205806742 TGKVDNIQAGELTEGIWR Unmodified 1986.0171 0.017053633 315 A0A024R4Z6;Q08945;Q59GH7 SSRP1 FACT complex subunit SSRP1 yes no 0 0 1 7 0 1 55.783 55.844 3 1.7769E-06 16122 20230619_1887_Aki_TMTPro18x_K_F7 107.65 97.373 55804 58466 63856 55681 59740 51023 59030 62547 50160 60237 62200 42724 54456 40274 68004 46137 48023 36883 51752 53474 64060 56483 62185 52297 59350 63022 52132 60421 62820 44136 56390 41967 67685 45833 46064 35171 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42393000 26708 315 25086 50170 40457 40457 1 9606 Homo sapiens 0.06348578812867345 TGLAVLELQNK Unmodified 1184.6765 0.6764876 1925 A3KN83-4;A3KN83-3;A3KN83-2;A3KN83 SBNO1 Protein strawberry notch homolog 1 yes no 0 0 0 1 0 1 57.854 57.854 3 0.016806 17621 20230619_1880_Aki_TMTPro18x_K_F1 51.727 33.995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26709 1925 25087 50171 40458 40458 1 9606 Homo sapiens 0.09153641740317653 TGLIDYNQLALTAR Unmodified 1547.8308 0.83075641 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;Q5HYG8;B4DW25;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4;G3V2Y4;G3V5L0 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 1.33 0.471 2 1 59.153 59.159 2;3 1.4669E-11 18262 20230619_1881_Aki_TMTPro18x_K_F2 202.44 152.32 159040 128870 138770 138350 147660 171660 169340 169930 177500 202700 212870 227780 215700 202540 245230 224970 212310 258490 146890 118090 142810 139460 153360 171040 169780 174550 181890 203810 217070 229190 221530 210900 246930 227660 203770 244990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 224790000 26710 657 25088 50172;50173;50174 40459;40460 40460 2 9606 Homo sapiens 0.07875426435043664 TGLITPK Unmodified 728.44324 0.44324019 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 1.5 0.5 1 1 45.738 45.779 2 0.074385 12485 20230619_1881_Aki_TMTPro18x_K_F2 75.213 6.037 170130 133620 150760 162140 169240 184790 173530 176470 221380 212920 222590 223800 234750 196450 179810 234310 267380 227570 157120 122590 155100 161710 174560 184970 176210 181810 222890 213600 228770 225780 236660 205550 188920 234320 254700 216360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120610000 26711 1853 25089 50175;50176 40461 40461 1 9606 Homo sapiens 0.06815629811330837 TGLLGIFWK Unmodified 1033.5961 0.59605244 4266 Q8TBQ9 TMEM167A Protein kish-A yes yes 0 0 0 6.5 0.5 1 1 64.659 64.695 2 0.00056111 20213 20230619_1886_Aki_TMTPro18x_K_F6 145.63 105.63 137450 104900 117970 103020 91157 118220 124300 125240 133790 126370 79206 83258 136290 111300 105600 139930 127080 119480 126890 96075 120980 104520 97882 118570 123710 127440 133720 126390 86375 87463 135850 115450 109290 138910 121330 113730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92708000 26712 4266 25090 50177;50178 40462 40462 1 9606 Homo sapiens 0.08059825207942595 TGLLSFEESQR Unmodified 1265.6252 0.62518031 4490 Q9H089;F8WFC6 LSG1 Large subunit GTPase 1 homolog yes no 0 0 0 3.5 0.5 1 1 52.257 52.301 2 0.00018046 15062 20230619_1883_Aki_TMTPro18x_K_F4 130.94 97.202 70349 70678 76651 83654 71168 102730 75489 93561 106630 78305 87143 65757 100670 75708 66902 84614 84817 87706 65191 64774 77325 83664 74706 102160 76880 95739 106000 79653 90716 67783 100660 78312 69710 85008 80999 83260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145690000 26713 4490 25091 50179;50180 40463 40463 1 9606 Homo sapiens 0.00299272975621534 TGLYNYYDDEK Unmodified 1379.5881 0.5881261 346 P50454;A0A024R5K8;A8K259;B4DN87;E9PJH8;E9PKH2;E9PPV6;E9PR70;Q9NPA9 SERPINH1;ra-a47 Serpin H1 yes no 0 0 0 3.5 0.5 1 1 51.322 51.371 2 8.6497E-06 14614 20230619_1883_Aki_TMTPro18x_K_F4 171.92 134.5 60685 51379 59881 75419 64456 93039 212470 216200 231890 111090 120380 161290 138080 118190 143340 147310 130110 169010 56120 47223 61258 74520 70650 95385 205910 209400 230110 119460 129880 159990 140660 124870 144970 148770 124880 160150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143520000 26714 346 25092 50181;50182 40464;40465 40465 2 9606 Homo sapiens -0.08648443360812053 TGNAWHSK Unmodified 899.42496 0.42496436 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 5.33 3.09 1 1 1 33.616 33.642 3 0.0048382 7425 20230619_1880_Aki_TMTPro18x_K_F1 85.958 52.837 358160 190630 547300 517860 779310 827870 556600 726640 531040 377310 608300 674610 466720 517630 673770 165660 658740 526830 331900 177360 543450 499480 784230 810500 574060 739380 544910 409100 615210 665300 491380 520280 677720 194170 629510 497040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 331330000 26715 261 25093 50183;50184;50185 40466;40467 40466 2 9606 Homo sapiens -0.028771121106615283 TGNCLYGNTCR Unmodified 1314.5445 0.54450393 1665 A0A7I2V4I5;Q5T200-2;Q5T200;Q6PJ96 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 0 0 0 7.5 0.5 1 1 36.173 36.2 2 0.0010909 7954 20230619_1888_Aki_TMTPro18x_K_F8 101.95 90.361 21207 14639 19315 17962 21266 21978 21606 24827 27095 27227 23554 23049 27606 20426 17536 33940 33739 31355 19576 13440 19797 17931 21945 21987 21942 25207 27172 27255 24492 23519 27569 21888 18992 33688 32108 29817 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23201000 26716 1665 25094 50186;50187 40468 40468 1 9606 Homo sapiens -0.1001865461057605 TGNFISTSTSLPR Unmodified 1379.7045 0.70449327 2289 B2RAX6;Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 0 0 0 2 0 1 49.266 49.325 2 7.2277E-05 14129 20230619_1881_Aki_TMTPro18x_K_F2 118.87 76.045 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26717 2289 25095 50188 40469 40469 1 9606 Homo sapiens 0.029829199297410014 TGNIPALVR Unmodified 939.55016 0.55016488 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DS32 CSE1L Exportin-2 yes no 0 0 0 2 0.816 1 1 1 46.149 46.201 2 0.0034933 12596 20230619_1881_Aki_TMTPro18x_K_F2 96.936 55.911 245840 178300 219780 230740 237920 229760 250470 256680 312230 288780 283030 281210 313600 253730 257480 330880 345030 282980 226970 163750 225730 228740 245920 233110 253740 261190 313460 289930 293030 284970 316450 266700 268020 328380 328850 269510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 601810000 26718 1462 25096 50189;50190;50191 40470 40470 1 9606 Homo sapiens 0.07797180025715988 TGNLETCLR Unmodified 1062.5128 0.51279309 1007;677 A0A024RBI8;B4E2E7;Q6FI58;B5BU58;B4E027;R4GNG3;F8W822;F8VXI9;Q14161-8;Q14161-3;Q14161-5;Q14161-4;Q14161-7;Q14161-10;Q14161-6;Q14161-9;Q14161-11;Q14161-2;Q14161;J3QRU8;A0A0C4DGN6;Q59FC3;Q9Y2X7;Q9Y2X7-3;K7EN79 GIT2;GIT1 ARF GTPase-activating protein GIT2;ARF GTPase-activating protein GIT1 no no 0 0 0 4.5 0.5 1 1 41.137 41.202 2 5.5421E-05 10008 20230619_1885_Aki_TMTPro18x_K_F5 162.88 76.044 104300 81326 87273 94843 108680 124350 113940 112560 139800 106850 121110 112570 127220 101590 102700 129850 133110 120900 96287 74588 90454 95062 111450 123230 115340 115640 140100 108550 125320 113750 128480 106670 106690 129460 126980 114970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115930000 26719 677;1007 25097 50192;50193 40471 40471 1 9606 Homo sapiens -0.015962793022254118 TGNQHFGYLYGR Unmodified 1411.6633 0.66329715 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;B4DG89 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 0 3 0 1 41.123 41.182 3 2.4613E-07 10085 20230619_1882_Aki_TMTPro18x_K_F3 160.88 144.54 64408 50391 62131 74470 58242 66504 67336 69504 82650 88939 87017 93623 99790 87746 82286 102600 114120 104370 59523 46332 63321 73088 61091 67899 67862 71333 83560 88979 89663 94617 100660 91481 85843 102900 108810 99146 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87036000 26720 534 25098 50194 40472 40472 1 9606 Homo sapiens -0.026067963190598675 TGNSMPHPATGK Unmodified 1196.5608 0.56080592 1505 Q13428-4;A0A3B3IS06;Q13428-3;Q13428;Q13428-7;Q13428-6;Q13428-8;Q13428-2;E7ETY2;Q13428-5;H0Y8Y7;A0A2R8Y857 TCOF1 Treacle protein yes no 0 0 0 8 0 1 34.484 34.476 3 1.4882E-05 7263 20230619_1888_Aki_TMTPro18x_K_F8 110.38 100.59 20437 13151 20289 20856 26250 31065 25791 25189 28853 24442 29418 30513 31122 24971 22076 21007 35576 31253 18871 12112 20720 20548 26800 30484 26122 26115 29229 24938 30226 30495 31280 25751 23342 21754 33878 29592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23907000 26721 1505 25099 50195 40473 40473 1 9606 Homo sapiens -0.029612053821892914 TGPFAEHSNQLWNISAVPSWSK Unmodified 2455.1921 0.19205789 1720 Q15257;Q15257-2;Q15257-3;A0A804CD06;A6PVN5;B4DZF8;F6WIT2;Q15257-4;Q68CR8;B7ZBQ0;B4DLX5;B7ZBP9;H0Y6E5;B4DDQ6;A0A6Q8PH23;B7ZBP7 PPP2R4;DKFZp781M17165 Serine/threonine-protein phosphatase 2A activator yes no 0 0 0 4 0 1 61.81 61.814 3 0.045569 19076 20230619_1883_Aki_TMTPro18x_K_F4 50.358 42.171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26722 1720 25100 50196 40474 40474 1 9606 Homo sapiens 0.022669538872833073 TGPFCVNHEPGR Unmodified 1369.6197 0.61971778 807 B4DYL2;A0A087WTJ9;Q8IWV7;A8K901;Q8IWV7-2 UBR1 E3 ubiquitin-protein ligase UBR1 yes no 0 0 0 7 0 1 37.316 37.381 3 1.1271E-05 8223 20230619_1887_Aki_TMTPro18x_K_F7 142.12 129.16 13490 11740 12703 15245 16007 13804 14465 16766 16303 15728 19274 17474 17917 17610 19518 18812 17768 17939 12472 10774 13028 15089 16296 14145 14740 16892 16620 16001 19569 17679 18417 18210 19719 18842 17018 17047 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21531000 26723 807 25101 50197 40475 40475 1 9606 Homo sapiens -0.05030729087866348 TGPLPWPAGFQPR Unmodified 1422.7408 0.74081919 833 Q15334;A0A087WW77 LLGL1 Lethal(2) giant larvae protein homolog 1 yes no 0 0 0 5 0 1 60.601 60.651 2 0.0014731 18208 20230619_1885_Aki_TMTPro18x_K_F5 93.111 62.54 34792 29083 30598 33826 33291 34836 34302 38047 40906 33780 33688 32556 32036 32122 36455 35029 33219 32169 32143 26666 31487 33795 34398 35233 34740 38522 40996 34341 34837 33102 32992 33278 36806 35006 31807 30589 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11980000 26724 833 25102 50198 40476 40476 1 9606 Homo sapiens 0.046358416171187855 TGPNLHGLFGR Unmodified 1167.6149 0.6148904 2752 C9JFR7;G4XXL9;P99999;CON__P62894 CYCS Cytochrome c yes no 0 0 0 4 0.816 1 1 1 46.918 46.984 3 2.099E-06 12466 20230619_1885_Aki_TMTPro18x_K_F5 127.83 109.56 324430 267710 286080 334240 344020 378580 378190 385890 432070 293200 290620 291590 347120 291150 352640 384310 348380 359340 299710 245640 295000 332630 353780 379570 380860 391210 431140 301500 307440 296390 352800 305270 358440 383200 333450 341530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3163699999.9999995 26725 2752 25103 50199;50200;50201 40477;40478;40479 40479 3 9606 Homo sapiens 0.03778754831682818 TGPPASIR Unmodified 797.43955 0.43955179 2924 E9PJP2;Q5TF21 SOGA3 Protein SOGA3 yes no 0 0 0 7 0 1 33.665 33.747 2 0.012906 6825 20230619_1887_Aki_TMTPro18x_K_F7 95.352 34.554 33429 23024 31005 38151 30020 34655 30230 30475 39741 30352 42226 44138 33217 34590 46145 25475 55515 45902 30862 21212 31722 37205 31301 35190 30776 31447 39989 31119 42847 43828 34858 35507 47091 26959 52959 43417 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13445000 26726 2924 25104 50202 40480 40480 1 9606 Homo sapiens 0.0327296003746369 TGPPMGSR Unmodified 801.38032 0.38032236 3913;3914 Q15056;A0A7I2V4E4;A0A7I2V3E4;Q75MT8;Q15056-2;A0A7I2V385;A4D198 EIF4H;WBSCR1;LOC392647 Eukaryotic translation initiation factor 4H no no 0 0 0 6 0 1 31.117 31.149 2 0.013808 6205 20230619_1886_Aki_TMTPro18x_K_F6 87.251 75.346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26727 3913;3914 25105 50203 40481 40481 1 9606 Homo sapiens -0.028312592483530352 TGPTVTQVK Unmodified 929.5182 0.51819605 1505 Q13428-4;A0A3B3IS06;Q13428-3;Q13428;Q13428-7;Q13428-6;Q13428-8;Q13428-2;E7ETY2;A0A6I8PRA0;B4DRA2;Q13428-5;H0Y8Y7;Q59FZ2;B4DLB1 TCOF1 Treacle protein yes no 0 0 0 8 0 1 40.396 40.388 2 3.793E-06 9651 20230619_1888_Aki_TMTPro18x_K_F8 186.54 91.006 72646 38261 82081 91543 112420 127900 90622 109710 103830 82566 113200 116220 114980 99207 105770 54223 126880 118610 67096 35508 83108 88414 113810 126020 93113 112550 105330 85954 115800 115790 116860 100600 108580 59000 121140 112010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42839000 26728 1505 25106 50204 40482 40482 1 9606 Homo sapiens 0.05061767551910634 TGQAAELGGLLK Unmodified 1156.6452 0.64518747 3207 O00231;O00231-2;B4DTS5;J3QRY4 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 7.67 0.471 1 2 55.425 55.487 2;3 2.6927E-05 15920 20230619_1888_Aki_TMTPro18x_K_F8 101.32 64.209 208300 163350 194580 227430 187530 245570 241110 223710 265800 266140 253500 243640 295990 245880 236590 306160 278560 298780 192460 150090 198970 224540 197120 246300 240710 231240 268980 266080 262420 248550 297910 256810 244330 306060 266250 283780 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 206330000 26729 3207 25107 50205;50206;50207 40483;40484;40485 40485 3 9606 Homo sapiens 0.07313068706230297 TGQAPGYSYTAANK Unmodified 1427.6681 0.66810776 2752 C9JFR7;G4XXL9;P99999 CYCS Cytochrome c yes no 0 0 0 1 0 1 42.354 42.354 3 1.3234E-11 11113 20230619_1880_Aki_TMTPro18x_K_F1 171.51 158.31 191960 137280 154130 188530 191480 121330 225270 249330 148540 206000 217460 228550 290780 254230 193780 361810 338690 309930 177070 126160 160410 185390 195970 130920 222900 244670 158730 210910 223120 232260 290030 266960 207660 358410 322460 295030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 605860000 26730 2752 25108 50208 40486 40486 1 9606 Homo sapiens -0.0286195696694449 TGQATVASGIPAGWMGLDCGPESSK Oxidation (M) 2492.1312 0.13117347 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 1 0 7.12 0.781 2 3 3 58.612 58.665 3;4 7.0508E-14 17012 20230619_1887_Aki_TMTPro18x_K_F7 136.71 127.66 175030 137130 159090 172530 164050 173710 168670 182150 185720 214180 232500 232660 251210 218180 184080 266250 241980 282770 161680 125860 163070 171360 170120 175790 170440 186340 190240 215240 237080 234950 252650 228080 192040 267450 231250 268250 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 468480000 26731 3374 25109 50209;50210;50211;50212;50213;50214;50215;50216 40487;40488;40489;40490;40491;40492;40493;40494 40490 1980 8 9606 Homo sapiens -0.05520687269518021 TGQATVASGIPAGWMGLDCGPESSK Unmodified 2476.1363 0.13625884 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 7 0 1 61.713 61.752 3 1.7092E-13 18566 20230619_1887_Aki_TMTPro18x_K_F7 128.98 120.79 109600 84324 109060 93668 73140 96255 106170 134890 120490 125030 140720 145970 163660 131290 99554 155270 166840 172430 101300 77306 110210 93989 79831 97993 105720 134760 122750 127440 144370 146790 163250 137240 106380 156430 159020 163580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 476670000 26732 3374 25109 50217 40495 40495 1 9606 Homo sapiens -0.042763834068864526 TGQATVASGIPAGWMGLDCGPESSKK Unmodified 2604.2312 0.23122186 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 1 1.5 0.5 1 1 58.108 58.115 3 1.3425E-13 17715 20230619_1880_Aki_TMTPro18x_K_F1 128.07 116.75 32368 29487 33933 29434 24115 32001 34753 31864 32780 40924 38119 34415 42539 29825 46925 42500 39443 39288 29963 26991 34174 29796 26135 32167 34378 32805 33757 40657 39050 35091 43427 31620 47201 42339 37810 37351 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71762000 26733 3374 25110 50218;50219 40496;40497 40496 2 9606 Homo sapiens -0.006724499357005698 TGQAVAVR Unmodified 800.45045 0.45045083 3668 P56545;P56545-3;P56545-2 CTBP2 C-terminal-binding protein 2 yes no 0 0 0 6 0.816 1 1 1 30.881 30.935 2 0.0087548 6118 20230619_1886_Aki_TMTPro18x_K_F6 103.74 38.487 40022 20064 50116 41458 60392 55642 48241 64722 54134 34307 56031 62093 40349 41919 58885 23577 65107 51801 36995 18576 50152 40293 61481 55372 49593 64624 54795 37136 56787 61047 42617 42921 59689 25690 62141 48951 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19105000 26734 3668 25111 50220;50221;50222 40498;40499 40498 2 9606 Homo sapiens 0.04224362411753191 TGQCECQPGITGQHCER Unmodified 2016.82 0.82002686 558 A0A024R972;P11047 LAMC1 Laminin subunit gamma-1 yes no 0 0 0 2.5 0.5 1 1 30.574 30.654 3 2.4366E-18 5834 20230619_1882_Aki_TMTPro18x_K_F3 174.78 173.29 14552 10475 8390.6 10101 11080 9150.5 9532.1 9139.1 12775 13093 11450 7548.4 14554 9384.5 8796.7 16055 14367 11720 13398 9594.4 9080 10226 11254 9342.6 9798.9 9443 12792 12857 11910 8000.1 14468 9986 9392.9 15760 13674 11187 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56825000 26735 558 25112 50223;50224 40500;40501 40501 2 9606 Homo sapiens -0.14771035335525085 TGQEIPVNVR Unmodified 1111.5986 0.59857163 2598 Q96KP4;B4DV28;A0A024R382;B4DPF1;J3QKT2;Q9H7K8;J3QRH4 CNDP2;FLJ00064 Cytosolic non-specific dipeptidase yes no 0 0 0 5.67 0.471 1 2 41.427 41.517 2 3.7845E-05 10163 20230619_1885_Aki_TMTPro18x_K_F5 151.22 115.04 103740 71996 85237 81569 116770 125030 115210 118490 176890 139430 166390 168890 167310 164060 119190 163880 196530 186310 95691 66045 88584 82195 118890 123000 118110 121990 176140 140810 171170 169970 168680 169300 126560 165820 187220 176760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214190000 26736 2598 25113 50225;50226;50227 40502;40503 40502 2 9606 Homo sapiens 0.04723628874944552 TGQEVVFVAEPDNK Unmodified 1531.7518 0.75183739 1878 B2RE46;A0A994J5J1;P04844-2;P04844;B4DJL0 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 0 0 3.5 0.5 1 1 51.735 51.781 2 1.1661E-11 14942 20230619_1882_Aki_TMTPro18x_K_F3 222.2 204.47 74663 59249 72782 79290 75665 88560 90023 85976 98914 95948 100340 102930 102740 96900 98041 108880 100620 109790 69012 54412 74190 78535 78791 88763 90201 88289 100320 96662 103020 103980 104620 100740 99985 109250 96314 104230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106800000 26737 1878 25114 50228;50229 40504;40505 40504 2 9606 Homo sapiens 0.00723154410115967 TGQEYKPGNPPAEIGQNISSNSSASILESK Unmodified 3102.5106 0.51055107 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 1 8 0 1 54.25 54.322 4 9.2668E-06 15353 20230619_1888_Aki_TMTPro18x_K_F8 82.726 70.985 11294 11991 9506.9 11951 11208 11322 9628.3 11178 11864 13268 11876 12459 11690 10257 11791 12969 13532 13005 10449 10971 9842.8 12069 11466 11505 9875.6 11483 11974 13267 12182 12605 11946 10796 12091 12988 12927 12354 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198980000 26738 3402 25115 50230 40506 40506 1 9606 Homo sapiens 0.04339621700682983 TGQPEELVSCSDCGR Unmodified 1693.7036 0.70358334 327 A0A994J414;A0A024R582;J3KMZ8;A0A994J6A8;Q92785;A0A994J426;A0A994J6N1 DPF2 Zinc finger protein ubi-d4 yes no 0 0 0 2 0 1 41.82 41.897 3 1.7625E-10 10707 20230619_1881_Aki_TMTPro18x_K_F2 121.95 112.03 72754 44443 81517 83343 109980 105550 106920 111130 109170 96110 122580 137600 122410 112130 111290 89293 138380 134320 67234 41040 82513 81212 111730 105140 108060 112730 111570 99188 125240 136850 124470 115300 114720 92708 132120 127110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80183000 26739 327 25116 50231 40507 40507 1 9606 Homo sapiens -0.11552030563757398 TGQPLCIC Unmodified 947.42047 0.42047261 1641 P12081;P12081-4;E7ETE2;A0A6Q8PHA5;A0A6Q8PFF2;Q52NV4;P12081-2;P12081-3;A0A6Q8PHE3;B4DDD8;B3KWE1;B4E1C5;A0A6Q8PF07;A0A6Q8PHQ0 HARS;HRS Histidine--tRNA ligase, cytoplasmic yes no 0 0 0 6 0 1 51.051 51.128 2 0.0099408 14378 20230619_1886_Aki_TMTPro18x_K_F6 94.539 88.455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26740 1641 25117 50232 40508 40508 1 9606 Homo sapiens -0.05534080640109096 TGQPMIHIYLDK Unmodified 1414.7279 0.72787125 1025 H7BY36;A0A0D9SFL3;B0QYK0;C9JGE3;Q01844-2;Q01844-6;Q01844-3;Q01844;Q01844-5 EWSR1 RNA-binding protein EWS yes no 0 0 0 1 0 1 52.933 52.933 3 0.0073792 15554 20230619_1880_Aki_TMTPro18x_K_F1 73.022 46.349 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26741 1025 25118 50233 40509 40509 1 9606 Homo sapiens 0.0370964244273182 TGQPMINLYTDR Oxidation (M) 1423.6766 0.67656396 2041 Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637-2;P35637;Q70T18 FUS RNA-binding protein FUS yes no 0 1 0 6.5 0.5 1 1 46.595 46.68 2 0.0011921 12377 20230619_1886_Aki_TMTPro18x_K_F6 94.465 70.435 168720 132620 154620 196740 179680 209970 184740 183990 216570 196010 222490 214580 208410 182340 202610 226550 208230 236340 155860 121940 158890 193430 184950 210620 186970 190130 218990 198070 227330 215990 212900 191470 206590 227430 199380 224270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 384970000 26742 2041 25119 50234;50235 40510;40511 40510 1282 2 9606 Homo sapiens -0.018327263220044188 TGQPMINLYTDR Unmodified 1407.6816 0.68164933 2041 Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637-2;P35637;Q70T18 FUS RNA-binding protein FUS yes no 0 0 0 7.5 0.5 1 1 51.135 51.213 2 1.3784E-12 14083 20230619_1887_Aki_TMTPro18x_K_F7 198.81 167.52 540310 382940 442560 530700 371970 577640 528250 502120 591960 591640 554640 552680 650450 565690 555940 686440 590080 652040 498440 351980 457420 524130 397760 578260 525470 520700 598110 592140 574990 563450 656430 589440 569620 685580 564690 619450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 950440000 26743 2041 25119 50236;50237 40512;40513 40512 2 9606 Homo sapiens -0.005884224593955878 TGQPMINLYTDRETGK Oxidation (M) 1838.8833 0.88326227 2041 Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637-2;P35637;Q70T18 FUS RNA-binding protein FUS yes no 0 1 1 7.67 0.471 1 2 45.177 45.234 3 0.00075887 11409 20230619_1887_Aki_TMTPro18x_K_F7 80.609 72.296 267360 281790 275210 288600 340520 271260 338140 333470 273690 347590 340820 268520 320380 267010 343180 384240 371270 342900 247730 257880 279870 290920 347370 277490 339180 336710 285550 347860 345280 276560 328690 281730 350340 381780 354760 326230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 622760000 26744 2041 25120 50238;50239;50240 40514;40515;40516 40514 1282 3 9606 Homo sapiens -0.002624032843641544 TGQPMINLYTDRETGK Unmodified 1822.8883 0.88834765 2041 Q59H57;B4DR70;A8K4H1;Q8TBR3;Q6IBQ5;H3BPE7;Q13344;P35637-2;P35637;Q70T18 FUS RNA-binding protein FUS yes no 0 0 1 7.5 0.5 1 1 48.716 48.793 3 8.3226E-12 12991 20230619_1888_Aki_TMTPro18x_K_F8 167.64 141.49 915960 943420 914640 831630 876750 845040 936210 954970 819770 1050800 1010100 801730 1087700 868480 1005900 1247800 1137200 993760 848320 862410 927960 850540 913820 857210 937600 970270 850620 1048700 1029600 828880 1103400 913870 1032800 1232900 1085800 947090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 731400000 26745 2041 25120 50241;50242 40517;40518 40518 2 9606 Homo sapiens 0.00981900578267414 TGQYSGIYDCAK Unmodified 1361.5922 0.59216562 2648 B7ZB41;B4E290;Q6NUK1-2;Q6NUK1 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes no 0 0 0 6 0 1 46.529 46.612 2 3.3378E-12 12400 20230619_1886_Aki_TMTPro18x_K_F6 176.29 126.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26746 2648 25121 50243 40519 40519 1 9606 Homo sapiens -0.07416677138758132 TGREDIANLADEFK Unmodified 1577.7686 0.76855009 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;A0A7I2V614;B4DEC3;Q71UF1;A0A7I2V538;A0A7I2V6A6 ACO2 Aconitate hydratase, mitochondrial yes no 0 0 1 4.5 0.5 1 1 55.1 55.139 3 4.2425E-07 16269 20230619_1883_Aki_TMTPro18x_K_F4 139.49 86.28 281340 235460 250810 300800 259040 345240 327340 363680 434900 396470 419980 486210 480300 436270 328930 505340 543890 571380 259950 216080 257870 298950 270950 345950 329420 371010 436260 401720 434470 487740 481520 455240 349980 509850 518500 541900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 197630000 26747 1050 25122 50244;50245 40520;40521 40520 2 9606 Homo sapiens 0.002776552960540357 TGRFEEAAGAAPCR Unmodified 1491.6889 0.68885998 1126 E9PF19;B4DY50;Q96E41;A0A0S2Z5F3;Q8N2L6;B2RB52;A0A384MDS4;Q9Y4P3;B4DY59 TBL2 Transducin beta-like protein 2 yes no 0 0 1 5.5 0.5 1 1 35.565 35.636 3 0.0073912 7863 20230619_1886_Aki_TMTPro18x_K_F6 56.527 43.547 35367 27053 32470 29389 38087 38632 34473 40705 40516 34512 38608 40325 47673 35060 36891 42559 46266 44204 32668 24797 33283 29634 39009 38424 35178 41246 40856 35389 40101 40511 47826 36760 38248 42723 44162 41975 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42139000 26748 1126 25123 50246;50247 40522 40522 1 9606 Homo sapiens -0.03731689858932441 TGSAVAPVHPPNR Unmodified 1301.684 0.6840326 2064 A8K548;Q8IZL8;C9JFV4;B4DR36;O15451;I3L1P4;I3L4M7;I3L445 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 0 0 0 7.5 0.5 1 1 32.912 32.955 3 5.5009E-08 6659 20230619_1888_Aki_TMTPro18x_K_F8 124.89 90.641 21655 17106 22947 23571 28371 26299 25216 25550 27929 23594 28894 29031 25179 27554 26894 31893 34733 28931 20029 15714 23281 23305 28912 26378 25699 26104 28322 24124 29444 29194 25951 28662 27776 31803 33116 27531 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66372000 26749 2064 25124 50248;50249 40523 40523 1 9606 Homo sapiens 0.04525794060600674 TGSGLNSFYDQR Unmodified 1343.6106 0.61059288 3613 P49792;A0A8V8TLA0;A0A8V8TL79;D3DX73 RANBP2;hCG_1994636 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 6.5 0.5 1 1 45.955 46.043 2 1.0288E-11 12143 20230619_1886_Aki_TMTPro18x_K_F6 164.04 124.73 35803 33393 38678 37555 41455 49415 47413 41484 49057 47721 45587 48365 55596 41846 46933 51834 49793 48435 33157 30595 39098 37749 43011 48886 47496 43103 49766 47925 47394 48840 55976 43929 48060 51727 47604 46045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53840000 26750 3613 25125 50250;50251 40524;40525 40524 2 9606 Homo sapiens -0.04746799172517058 TGSICWAAK Unmodified 992.47495 0.47495102 247 A0A024R3J7;P46977;P46977-2 hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 0 0 2 0 1 49.361 49.42 2 0.00043766 14134 20230619_1881_Aki_TMTPro18x_K_F2 135.83 81.422 93843 71471 88118 74856 93533 94122 106390 109320 101820 88946 70013 68351 103920 74006 68175 101260 107230 73427 86693 65492 89990 75668 96972 94105 106380 110020 102780 90359 74789 70582 103250 77639 72273 99670 101980 70160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207970000 26751 247 25126 50252 40526 40526 1 9606 Homo sapiens -0.02158745497047221 TGSPGPELLFHEGQQK Unmodified 1723.8529 0.85294842 1971 A6NHN7;A6NHB5;Q14202-2;Q14202;A8K3Z7;A6NL54;Q14202-3 ZMYM3 Zinc finger MYM-type protein 3 yes no 0 0 0 5.5 0.5 1 1 49.378 49.455 3 2.7639E-16 13703 20230619_1886_Aki_TMTPro18x_K_F6 194.01 167.58 62737 58059 58451 59124 59692 63199 68102 65781 62014 66151 80821 70286 77321 57924 77213 66762 71188 67070 58026 53151 59755 59720 62088 63696 68013 67041 64265 66932 81830 70787 78939 60660 78125 67007 68142 63715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70957000 26752 1971 25127 50253;50254 40527 40527 1 9606 Homo sapiens 0.01997606112786343 TGSPGSPGAGGVQSTAK Unmodified 1457.711 0.71103521 419 A0A024R6Z0;O43237-2;O43237;J3KRI4;J3KRZ2 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 7.5 0.5 1 1 37.177 37.202 3 1.4129E-14 8158 20230619_1887_Aki_TMTPro18x_K_F7 168.69 143.25 18665 10316 22435 23388 35273 47162 26824 40136 38129 22332 36048 49576 31693 42987 37493 18757 44597 51854 17253 9561.7 22685 22824 35474 45660 27912 40960 38053 24380 36994 48800 32876 43236 38310 21160 42652 48873 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67485000 26753 419 25128 50255;50256 40528 40528 1 9606 Homo sapiens 0.0004881309046140814 TGTAEMSSILEER Oxidation (M) 1438.661 0.66097347 3504 V9HW26;P25705;P25705-3;K7ERX7;K7ESA0 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 1 0 2 0.816 1 1 1 42.021 42.068 2 6.1512E-06 10748 20230619_1881_Aki_TMTPro18x_K_F2 136.94 121.31 145200 122980 123800 163780 174860 164940 180370 184130 197830 182630 228140 204930 205380 177310 178720 221000 191610 205840 134130 112910 128540 162010 177560 167190 182060 186740 201650 185320 231450 206280 209060 186060 183160 220430 183310 195620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 304700000 26754 3504 25129 50257;50258;50259 40529;40530 40530 2171 2 9606 Homo sapiens -0.04081057629650786 TGTAEMSSILEER Unmodified 1422.6661 0.66605885 3504 V9HW26;P25705;P25705-3;K7ERX7;K7ESA0 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 2.8 0.748 2 2 1 51.793 51.841 2;3 1.3296E-27 14921 20230619_1882_Aki_TMTPro18x_K_F3 254.19 226.86 434030 399820 452270 487770 407410 546350 557010 530590 619960 645580 672750 626990 658190 613300 600370 679390 663480 647720 401790 366630 457670 486160 431430 547440 554870 546220 630130 645780 686790 637040 669830 636330 615440 679750 634100 615600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1564899999.9999998 26755 3504 25129 50260;50261;50262;50263;50264 40531;40532;40533 40532 3 9606 Homo sapiens -0.02836753767041955 TGTAYTFFTPNNIK Unmodified 1573.7777 0.77765821 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 3.67 0.471 1 2 59.658 59.673 2 1.8269E-19 18157 20230619_1883_Aki_TMTPro18x_K_F4 252.51 214.79 22538 18882 22205 20453 15005 20895 24711 21697 20832 22809 22067 16051 20297 14787 19523 22184 18117 17261 20841 17301 22474 20549 16435 21110 24236 22146 21493 22779 22469 16584 20714 15697 19804 21891 17342 16450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24848000 26756 3137 25130 50265;50266;50267 40534;40535 40535 2 9606 Homo sapiens 0.013720486523880027 TGTCGYCGLQFR Unmodified 1418.6071 0.60710418 3301 O75380;Q6IBC4 NDUFS6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial yes no 0 0 0 2 0.816 1 1 1 47.418 47.469 2 7.508E-13 13284 20230619_1881_Aki_TMTPro18x_K_F2 207.83 161.83 82475 79249 83613 94267 111660 126470 105580 93144 117560 93806 102880 74875 95637 87967 86610 92636 89242 85957 76354 72642 85340 94350 113630 124680 107120 97496 118440 94307 105730 77431 97452 90540 88409 92641 85338 81725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146610000 26757 3301 25131 50268;50269;50270 40536 40536 1 9606 Homo sapiens -0.08545508542397329 TGTIALSEVENIHQK Unmodified 1638.8577 0.85769944 4093 Q68DQ2 CRYBG3 Very large A-kinase anchor protein yes yes 0 0 0 6 0 1 50.108 50.185 3 3.3862E-20 13976 20230619_1886_Aki_TMTPro18x_K_F6 196.33 149.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26758 4093 25132 50271 40537 40537 1 9606 Homo sapiens 0.06382490255577977 TGTITTFEHAHNMR Oxidation (M) 1630.7522 0.75218852 3447 P13639;Q8TA90;Q6PK56 EEF2 Elongation factor 2 yes no 0 1 0 7 0.816 1 1 1 35.114 35.152 4 6.7334E-05 7642 20230619_1886_Aki_TMTPro18x_K_F6 105.66 94.209 105710 75025 86325 96991 103570 105580 104280 101130 107090 116330 130520 117460 125440 104970 112650 120120 130510 119350 97517 68906 89616 96243 106200 106030 105210 104040 109910 116770 132500 118810 127560 109500 115800 120410 124630 113410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2069099999.9999998 26759 3447 25133 50272;50273;50274 40538;40539 40538 2094 2 9606 Homo sapiens -0.037957491417046185 TGTITTFEHAHNMR Unmodified 1614.7573 0.75727389 3447 P13639;Q8TA90;Q6PK56 EEF2 Elongation factor 2 yes no 0 0 0 7 0.816 1 1 1 38.522 38.566 4 1.8647E-11 8873 20230619_1888_Aki_TMTPro18x_K_F8 172.76 163.71 94490 72648 89009 79610 74089 94910 84942 90187 107840 108130 107430 109640 125330 101900 99453 133880 129840 120910 87298 66594 90600 80084 78585 94696 85778 92908 108590 108380 111010 111010 126110 107060 103450 133190 123870 115010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1817699999.9999998 26760 3447 25133 50275;50276;50277 40540;40541 40541 2 9606 Homo sapiens -0.025514452790730502 TGTIVVEGHELHDEDIR Unmodified 1918.9385 0.93846896 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;B4DVX2;Q7L4K8;Q9P1N9 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 1.8 0.748 2 2 1 42.578 42.622 3;4 1.8936E-23 11033 20230619_1881_Aki_TMTPro18x_K_F2 197.14 172.22 154040 128060 161650 154000 163760 198080 152470 175550 213090 131660 142960 141420 138540 132680 160890 136750 163200 151700 142510 117450 163560 154000 169860 196380 156320 179640 210610 135890 149820 142870 142740 137320 163200 138290 156050 143970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 826000000 26761 1736 25134 50278;50279;50280;50281;50282 40542;40543 40543 2 9606 Homo sapiens 0.01575726507780928 TGTLQFNTVSK Unmodified 1194.6245 0.62445203 3044 H0YEX9;P57087-2;P57087;P57087-3 JAM2 Junctional adhesion molecule B yes no 0 0 0 2 0 1 49.809 49.868 3 1.6511E-06 14387 20230619_1881_Aki_TMTPro18x_K_F2 132.17 112.85 121370 87844 127180 122470 139830 147020 131610 115260 144760 143200 166520 142390 147040 131510 148030 161190 176670 161190 112190 80740 128850 121120 143950 146080 133600 120740 147580 143260 168820 144340 150800 137570 152160 161470 168650 153150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72367000 26762 3044 25135 50283 40544 40544 1 9606 Homo sapiens 0.03492478326552373 TGTLTQNR Unmodified 889.46174 0.4617438 3387;959;3651 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z1Q9;B7Z3F8;B3KV59;B4DHD7;Q53FM3;A0A384MR29;Q658V6;P20648;B4E0R9;P05023;P05023-4;P05023-3;B7Z3V1;P05023-2;B3KRI1;B2RAQ4;P50993;B1AKY9;A0A0S2Z3W6;H0Y7C1;B3KX35;B3KW93;B4DIQ8;Q13733;E9PRA5;A0A669K9X0;P54707;P54707-2 ATP1A3;DKFZp666G172;ATP4A;ATP1A1;ATP1A2;ATP1A4;ATP12A Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Potassium-transporting ATPase alpha chain 2 no no 0 0 0 6.5 0.5 1 1 30.891 30.956 2 0.020734 6165 20230619_1886_Aki_TMTPro18x_K_F6 88.358 37.727 28017 14053 36642 36455 63162 65922 43015 66153 55903 18435 26824 29793 21521 22838 41475 12584 33702 22714 25910 13066 36896 35320 62938 64365 44970 66190 54951 21575 28718 29502 23122 23230 41226 13478 32245 21507 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19984000 26763 959;3387;3651 25136 50284;50285 40545;40546 40545 2 9606 Homo sapiens 0.012591397152391437 TGTLTSDSLVVR Unmodified 1247.6721 0.67213051 466 A0A024R7P3;A0A024R7N2;Q9HD20-2;Q9HD20 ATP13A1 Manganese-transporting ATPase 13A1 yes no 0 0 0 6 0 1 47.431 47.511 2 8.443E-13 12824 20230619_1886_Aki_TMTPro18x_K_F6 206.49 178.32 36335 32392 35955 36805 41325 45248 47463 48468 53259 46400 51570 56798 54256 45073 46725 54672 57942 54663 33614 29686 36649 36934 42661 45192 47674 49226 53839 47319 53139 56787 54936 47383 48307 54765 55307 51932 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45679000 26764 466 25137 50286 40547 40547 1 9606 Homo sapiens 0.058201325267418724 TGTLTTNQMSVCR Unmodified 1467.681 0.68099741 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9;A8K9K1;Q93084-3;Q93084-5;Q93084-6;Q93084-1;Q93084-7;Q93084;Q93084-4 ATP2A2;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 0 0 0 4.5 3.5 1 1 41.731 41.729 2 0.0042028 10880 20230619_1880_Aki_TMTPro18x_K_F1 98.156 87.633 34356 28112 35663 35337 37003 39655 39709 36991 46325 31873 32042 31675 32709 25306 35758 27014 33485 31940 31778 25797 36137 35154 38394 39712 40075 37848 46209 32507 33587 31941 33492 26426 36131 27425 32050 30290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67055000 26765 1076 25138 50287;50288 40548;40549 40548 2 9606 Homo sapiens -0.03413585170733313 TGTLTTNQMSVCR Oxidation (M) 1483.6759 0.67591203 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9;A8K9K1;Q93084-3;Q93084-5;Q93084-6;Q93084-1;Q93084-7;Q93084;Q93084-4 ATP2A2;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 0 1 0 7.67 0.471 1 2 36.118 36.132 2;3 4.0974E-05 7763 20230619_1887_Aki_TMTPro18x_K_F7 111.31 99.52 57453 46567 50483 46756 62672 67581 61609 63666 70460 40569 39079 37675 39288 31826 49353 41750 45196 31725 53068 42645 52023 47516 64118 66685 62435 64664 69951 42201 41603 38211 40573 33540 49731 41267 43190 30289 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 192040000 26766 1076 25138 50289;50290;50291 40550;40551 40550 642 2 9606 Homo sapiens -0.04657889033342144 TGTLVEEAFWIDK Unmodified 1507.7559 0.75586013 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3;Q69YJ6;G3V3B0;Q9UKV3-3;Q9UKV3-2 ACIN1;DKFZp667N107 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 0 5.5 0.5 1 1 63.533 63.58 3 0.00042375 19568 20230619_1885_Aki_TMTPro18x_K_F5 93.011 73.687 29704 27148 57588 55941 46390 46413 55590 58341 56150 56108 58140 57513 37597 50426 60070 60108 47127 62052 27700 25065 56002 53976 49187 47893 55576 58725 57233 56843 58698 58094 40206 52679 59986 60360 45319 58862 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 567510000 26767 2896 25139 50292;50293 40552 40552 1 9606 Homo sapiens 0.022292439037755685 TGTQEVGGQDPGEAVQPCR Unmodified 1984.8909 0.89086684 2354 B3KMQ6;Q9NZT2-2;Q9NZT2;Q05BV5;Q6PK21;A0A0A0MRN5 OGFR Opioid growth factor receptor yes no 0 0 0 2 0 1 39.167 39.234 3 1.4378999999999998E-19 9461 20230619_1881_Aki_TMTPro18x_K_F2 179.1 163.68 23262 18005 21067 17869 23780 28832 25153 25828 26079 29031 29892 28184 29875 26794 24091 30898 33235 35384 21486 16490 21610 18219 24546 28255 25317 26659 26684 29140 30472 28611 30233 27907 25142 31213 31725 33553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53070000 26768 2354 25140 50294 40553 40553 1 9606 Homo sapiens -0.06218295754661085 TGTSCALDCGAGIGR Unmodified 1494.6555 0.65551094 514 A0A024R8E4;Q9BV86-2;Q9BV86 C9orf32;NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed yes no 0 0 0 5.33 0.471 2 1 41.768 41.857 2 5.4017E-49 10296 20230619_1885_Aki_TMTPro18x_K_F5 267.02 234.7 92334 73604 74962 77650 72715 78949 79324 82157 89132 104550 88162 77522 117600 81720 63843 131190 106900 91138 85232 67438 77567 78153 75929 79854 79932 84281 90352 103620 91646 80175 116450 86823 68610 128590 101760 87045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 520100000 26769 514 25141 50295;50296;50297 40554;40555 40554 2 9606 Homo sapiens -0.07203059693165415 TGTVSLEVR Unmodified 960.52401 0.52400971 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 5 0 1 42.085 42.168 2 0.00083076 10374 20230619_1885_Aki_TMTPro18x_K_F5 121.85 73.062 149550 119940 122740 115630 117570 128070 132740 128400 157780 161520 178700 159440 177660 147700 150030 188110 193940 157380 138060 109810 126790 117420 123020 128660 133770 132030 160150 161410 182150 161670 180050 154850 155670 186570 184880 149940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 873010000 26770 3606 25142 50298 40556 40556 1 9606 Homo sapiens 0.04216866063586622 TGVAPDVFAENMK Unmodified 1377.6599 0.65985126 79 Q8N995;A0A024R059;Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 56.177 56.245 3 7.9495E-16 16543 20230619_1886_Aki_TMTPro18x_K_F6 171.29 153.48 201370 165290 180500 164560 75773 95414 130480 134100 150010 193940 142070 106330 190820 134850 103240 236570 153780 114550 186040 151350 183390 165560 88637 102740 129180 135950 151690 190050 147910 113140 188910 143560 110050 228870 146380 110240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 430490000 26771 79 25143 50299;50300 40557;40558 40558 2 9606 Homo sapiens -0.013872272079424874 TGVAPDVFAENMK Oxidation (M) 1393.6548 0.65476588 79 Q8N995;A0A024R059;Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes no 0 1 0 6 0 1 51.395 51.472 3 0.0060124 14533 20230619_1886_Aki_TMTPro18x_K_F6 63.181 49.98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26772 79 25143 50301 40559 40559 36 1 9606 Homo sapiens -0.026315310705740558 TGVCICFYQHK Unmodified 1411.6377 0.63767603 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9 DDX21 Nucleolar RNA helicase 2 yes no 0 0 0 3 0 1 48.517 48.596 3 3.071E-05 13513 20230619_1882_Aki_TMTPro18x_K_F3 137.17 118.11 478120 379370 381750 416590 380460 393900 428240 358620 466310 361350 328960 251590 315470 225320 345070 287660 291780 239150 441280 347720 395940 417480 396610 399480 430010 369180 467200 361970 343000 259670 323490 236830 347090 285580 279330 227860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 387490000 26773 1748 25144 50302 40560 40560 1 9606 Homo sapiens -0.05167730157359074 TGVHHYSGNNIELGTACGK Unmodified 2013.9327 0.93267208 568 A0A024R9D3;P62888;E5RI99;A0A0B4J213 RPL30 60S ribosomal protein L30 yes no 0 0 0 6.25 2.49 1 1 2 37.215 37.241 4 4.9961E-26 8506 20230619_1887_Aki_TMTPro18x_K_F7 218.12 200.22 100140 76424 107760 112710 110910 133330 132370 124890 106500 116680 114620 123560 129600 96335 110020 141070 144850 153690 92617 70274 108950 111070 115490 132990 131430 127970 110370 118510 117960 124240 130810 102720 114310 141630 138320 145810 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 244100000 26774 568 25145 50303;50304;50305;50306 40561;40562;40563;40564 40562 4 9606 Homo sapiens -0.03373695275490718 TGVQFTTK Unmodified 880.46543 0.46543219 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2YQI1;A0A7I2V4R2;B7ZA24;P40763-3;P40763-2;A0A7I2YQD2;A0A7I2V4R3;A0A7I2V395;A0A7I2V2G1;A0A7I2V552;A0A7I2V4F6;A0A7I2V2T1;B5BTZ6 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 0 0 1.5 0.5 1 1 44.413 44.454 2 0.0093245 12083 20230619_1880_Aki_TMTPro18x_K_F1 112.11 18.964 75829 56271 69671 75987 115500 130550 97463 108080 143840 100250 108670 95434 114070 87987 93998 114510 132210 100280 70029 51697 72025 75790 115990 127310 100700 111650 142400 101710 113260 96948 115290 92436 98143 113790 125900 95516 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88394000 26775 1660 25146 50307;50308 40565 40565 1 9606 Homo sapiens 0.020418094890828797 TGVQTFR Unmodified 807.4239 0.42390173 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89;A0A3B3ITV3;A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 7.5 0.5 1 1 35.996 36.023 2 0.010386 7862 20230619_1888_Aki_TMTPro18x_K_F8 118.05 87.383 130940 121580 138790 126120 183850 184730 193730 164450 214150 117420 129380 119280 122220 100650 172790 112700 151060 111930 121240 111320 140950 127850 187480 181970 195210 168180 213310 121450 136490 120440 127380 105090 173260 113230 144470 106460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 125340000 26776 3647 25147 50309;50310 40566;40567 40567 2 9606 Homo sapiens 0.012486735204220167 TGVVPQLVK Unmodified 939.57532 0.57531699 1653 A0A7I2V351;A0A7I2V487;Q7Z726;A8K7D9;A0A7I2YQE1;P52292;A0A7I2V3Z3 KPNA2 Importin subunit alpha;Importin subunit alpha-1 yes no 0 0 0 2.5 0.5 2 2 51.802 51.854 2;3 0.00071667 15256 20230619_1881_Aki_TMTPro18x_K_F2 105.52 84.619 304050 263630 268510 296110 226830 316830 290130 282980 367190 225920 168030 122280 202050 142430 183110 237290 190220 145570 280980 241610 275340 296680 241350 317920 291140 289940 361430 228580 182970 129850 204160 151370 187210 231640 181620 139400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 436060000 26777 1653 25148 50311;50312;50313;50314 40568;40569 40568 2 9606 Homo sapiens 0.10311234828293436 TGWPQHVWALELK Unmodified 1563.8198 0.8197978 2424 Q32LY2;B3KV85;P61296-2;P61296;Q3T1D5;H0YAH1 HAND2 Heart- and neural crest derivatives-expressed protein 2 yes no 0 0 0 3 0 1 60.578 60.607 3 9.4689E-05 18678 20230619_1882_Aki_TMTPro18x_K_F3 102.5 82.666 25171 18127 24967 25857 16350 18271 23473 21344 26909 27045 23742 28094 29145 27129 28946 32592 29594 36958 23256 16665 25253 25378 17860 19120 23367 21767 27105 27061 24783 28430 29584 28303 29496 32895 28360 35030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49726000 26778 2424 25149 50315 40570 40570 1 9606 Homo sapiens 0.06044068851406337 TGYGGGFNER Unmodified 1056.4625 0.46247208 3347 O95218-2;O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes no 0 0 0 4.5 0.5 1 1 37.389 37.458 2 0.00011992 8502 20230619_1883_Aki_TMTPro18x_K_F4 142 121.37 147600 111190 139250 157440 178830 206180 178120 183900 234400 201650 220760 220570 246500 201230 179460 260700 244110 211390 136350 102200 142880 155750 182780 204200 181340 189830 235000 203520 228160 222530 247590 211290 187680 258040 232720 201420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 269740000 26779 3347 25150 50316;50317 40571;40572 40571 2 9606 Homo sapiens -0.06350065635729152 TGYNFQR Unmodified 884.41407 0.41406533 3260 O43660-2;O43660 PLRG1 Pleiotropic regulator 1 yes no 0 0 0 7.5 0.5 1 1 37.405 37.43 2 0.019836 8437 20230619_1888_Aki_TMTPro18x_K_F8 105.39 84.091 127490 101480 127300 124210 172180 175490 156620 151900 204570 120610 153290 140270 143500 132160 146200 139020 173980 122900 117860 93109 129980 124250 174830 173040 160230 155960 203340 124380 159190 141350 147020 136860 150090 138750 165840 117090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69732000 26780 3260 25151 50318;50319 40573;40574 40574 2 9606 Homo sapiens -0.032765144849577155 TGYSFVNCK Unmodified 1074.4804 0.48043033 2870 E5KS95;P43897;P43897-2;C9JG32;C9JT21;F8VPA7;F8VS27;P43897-4;P43897-3;F8WCK2;A0A494C1M9 TSFM Elongation factor Ts, mitochondrial;Elongation factor Ts yes no 0 0 0 2 0 1 47.621 47.692 2 0.0056136 13365 20230619_1881_Aki_TMTPro18x_K_F2 103.55 82.645 129450 104820 110800 121050 136560 152090 149000 147590 177250 89739 91706 75407 87286 78060 107680 101100 105390 90179 119550 96114 114580 121340 140230 151320 150290 149520 175280 93534 97871 77448 90272 81636 108970 100640 100750 85823 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169900000 26781 2870 25152 50320 40575 40575 1 9606 Homo sapiens -0.05383066705235251 TGYTLDVTTGQR Unmodified 1310.6466 0.64664404 2265;1680;3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;O43390-4;A0A6Q8PEX7;B4DMD1;A0A6Q8PHG0;A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V5Q6;F6UXX1;A0A7I2V4J0;A0A7I2V2F0;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 HNRNPR;HNRPR;DKFZp686A13234;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 6.5 1.12 1 1 1 1 44.976 45.046 2 4.6466E-40 11685 20230619_1886_Aki_TMTPro18x_K_F6 295.31 279.08 1005900 791080 911560 909620 946040 1037800 1057900 991470 1066900 1085200 1227100 1173800 1240600 1007800 1148400 1345400 1329200 1273800 929230 725410 934380 910890 982900 1038900 1060600 1018800 1092800 1094400 1251800 1182800 1261100 1062900 1180400 1342000 1269700 1210800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5178700000 26782 3254;1680;2265 25153 50321;50322;50323;50324 40576;40577;40578 40577 3 9606 Homo sapiens 0.0037465800432983087 THAGLRPYSCER Unmodified 1445.6834 0.68338067 34 B2RDP4;A8K1I4;A0A024QZD9;Q96K58;Q96K58-2 ZNF668 Zinc finger protein 668 yes no 0 0 1 8 0 1 28.215 28.241 4 0.0050836 5040 20230619_1888_Aki_TMTPro18x_K_F8 76.522 63.755 17385 7004.5 12350 15483 21018 20615 20043 18003 23138 11375 12556 13866 8981.8 10233 10781 9966.2 13947 11037 15986 6502.5 13113 14984 21114 20384 20337 18401 22935 11949 13237 13835 9393.7 10648 11101 10085 13293 10482 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2844600 26783 34 25154 50325 40579;40580 40579 2 9606 Homo sapiens -0.021633686507811944 THEAEIVEGENHTYCIR Unmodified 2056.9273 0.92725235 3484 P21333;P21333-2;Q60FE5;Q60FE6;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91;H0Y5C6 FLNA;FLJ00119 Filamin-A yes no 0 0 0 2.5 0.5 1 1 39.074 39.134 4 3.257E-38 9403 20230619_1881_Aki_TMTPro18x_K_F2 254.72 221.53 61301 38800 45035 56436 66243 51181 58867 63925 94224 74295 78275 85084 105450 81727 69175 102180 78772 87010 56479 35702 47458 55461 66869 52490 60849 64694 93333 74903 82241 85800 104990 85498 71696 101410 75333 82773 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235820000 26784 3484 25155 50326;50327 40581 40581 1 9606 Homo sapiens -0.0589341885797694 THEAQIQEMR Oxidation (M) 1257.5772 0.57718426 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5 MYH9 Myosin-9 yes no 0 1 0 2 0.707 1 2 1 25.918 25.985 3 9.9088E-06 3801 20230619_1881_Aki_TMTPro18x_K_F2 147.19 130.65 141350 58800 122350 132440 184730 145520 159340 173760 234500 143640 173860 180300 174410 151290 139150 150690 142150 157790 130150 54555 126800 127770 185990 146810 164390 174700 231930 148040 181230 180380 176340 156950 142350 151840 136080 149740 6 4 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 246050000 26785 148 25156 50328;50329;50330;50331 40582;40583;40584;40585;40586;40587 40584 77 6 9606 Homo sapiens -0.041301242160898255 THEAQIQEMR Unmodified 1241.5823 0.58226964 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5 MYH9 Myosin-9 yes no 0 0 0 2.5 0.5 1 1 31.294 31.368 3 6.4283E-10 6238 20230619_1881_Aki_TMTPro18x_K_F2 199.68 149.96 60110 17014 45840 54603 65250 48445 61042 58408 91153 83167 83111 83556 99060 78859 56736 106040 69409 68638 55246 15972 48069 51900 66032 49678 62684 59651 90853 82765 86277 84682 98550 82895 59415 103900 66282 65592 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 213170000 26786 148 25156 50332;50333 40588;40589 40588 2 9606 Homo sapiens -0.02885820353458257 THEDIEAQIR Unmodified 1210.5942 0.59421454 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5;B4DGZ4;A0A494C1M2;O75533-2;A8K355;F8WC19 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 0 2.5 0.5 1 1 35.374 35.431 3 1.1705E-35 7839 20230619_1881_Aki_TMTPro18x_K_F2 260.04 235.75 188860 28637 119990 167070 198400 123800 179110 194420 252540 207700 216430 233690 252080 197720 130360 280030 159740 235820 173220 27691 128970 156500 198910 130040 183890 194080 251630 209990 225220 234930 250250 209470 137200 277150 153080 224170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 679180000 26787 3309 25157 50334;50335 40590 40590 1 9606 Homo sapiens -0.002658803386339059 THFDPMGVR Oxidation (M) 1074.4917 0.49166372 2240 B4DXX1;B2R713;Q7Z2T5 TRMT1L TRMT1-like protein yes no 0 1 0 5 0 1 34.219 34.307 3 0.081005 7284 20230619_1885_Aki_TMTPro18x_K_F5 43.512 17.574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26788 2240 25158 50336 40591 40591 1394 1 9606 Homo sapiens -0.04260244611077724 THFDPMGVR Unmodified 1058.4967 0.4967491 2240 B4DXX1;B2R713;Q7Z2T5 TRMT1L TRMT1-like protein yes no 0 0 0 7 0 1 39.938 40.003 3 0.00094284 9270 20230619_1887_Aki_TMTPro18x_K_F7 98.033 68.946 40013 20652 34457 36750 46786 40301 41082 38991 52944 35691 35780 33943 37359 33778 45609 39264 35930 33930 36871 19073 35648 35813 47412 40458 42098 39842 52545 36237 37597 34552 38483 35123 45664 39097 34457 32291 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21527000 26789 2240 25158 50337 40592 40592 1 9606 Homo sapiens -0.030159407484688927 THFDYQFGYR Unmodified 1332.5887 0.58873523 4130 Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A0B4J210;E5RH50 LARP1 La-related protein 1 yes no 0 0 0 8 0 1 45.944 45.982 3 4.8716E-10 11878 20230619_1888_Aki_TMTPro18x_K_F8 172.98 167.48 150570 96798 134030 135310 119020 123170 133080 121760 187550 112120 107520 101620 114120 91045 107370 117640 102300 114110 138920 89019 137290 133320 125270 125440 135010 124320 184560 113680 114320 103330 115930 95709 109080 117560 98015 108370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 226490000 26790 4130 25159 50338 40593 40593 1 9606 Homo sapiens -0.06425559130434522 THFGGGK Unmodified 702.34492 0.34492313 1364 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4;A0A2R8Y8A0 RPS24 40S ribosomal protein S24 yes no 0 0 0 5.33 3.09 1 1 1 32.023 32.055 3 0.0021882 6352 20230619_1888_Aki_TMTPro18x_K_F8 116.54 68.94 272770 44032 413120 429310 723810 418540 462510 695720 332560 215000 478270 504530 294270 392730 390510 126750 457410 386270 252030 43815 412240 401220 716430 430360 478310 678130 351390 251280 476210 495160 311670 394210 397580 147180 436500 364390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 194540000 26791 1364 25160 50339;50340;50341 40594;40595 40595 2 9606 Homo sapiens -0.018155537138454747 THIDVIHYR Unmodified 1152.604 0.60399136 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57;A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 7 0 1 36.4 36.468 3 1.6367E-08 7895 20230619_1887_Aki_TMTPro18x_K_F7 168.26 146.79 83004 33879 59641 69434 74576 61977 65917 76443 106660 86373 100870 89265 98311 86834 67473 103040 77233 92652 76333 31407 62773 67051 76034 63565 68239 77335 106050 86891 103500 90485 98971 90476 69901 102610 73909 88055 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78211000 26792 471 25161 50342 40596 40596 1 9606 Homo sapiens 0.03379352457409368 THIISDK Unmodified 812.43922 0.43921744 3864 Q13619;B2RBV7;A0A0A0MR50;Q13619-2 CUL4A Cullin-4A yes no 0 0 0 6 0 1 35.919 35.98 3 0.013255 7971 20230619_1886_Aki_TMTPro18x_K_F6 87.616 19.195 112950 68531 130480 135880 171790 152040 154090 153030 204920 121960 154000 160720 148000 131100 132950 125390 158870 147660 104410 63341 131700 131800 174430 152520 157910 155470 203570 126250 160160 160380 150600 135880 136840 127400 151680 140050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116070000 26793 3864 25162 50343 40597 40597 1 9606 Homo sapiens 0.025495403176250875 THILLFLPK Unmodified 1080.6696 0.66955173 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;A0A7P0T9D6;I3L514 P4HB Protein disulfide-isomerase yes no 0 0 0 5.5 0.5 1 1 57.871 57.933 3 6.7862E-05 17068 20230619_1885_Aki_TMTPro18x_K_F5 124.23 87.897 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26794 537 25163 50344;50345 40598;40599 40598 2 9606 Homo sapiens 0.1324437365040012 THINAVVAK Unmodified 951.55016 0.55016488 2026 Q6IAX4;A8K3B9;Q16799-3;B7Z4K5;A8MT72;Q2NKQ5;Q16799-2;Q16799 RTN1 Reticulon;Reticulon-1 yes no 0 0 0 1.5 0.5 1 1 38.111 38.143 3 0.00034305 8940 20230619_1881_Aki_TMTPro18x_K_F2 105.98 37.553 332380 118070 304500 346540 385150 295990 392920 365240 497530 328980 411890 377390 310480 306540 307640 323080 417920 364220 306050 110360 312980 330130 393060 304620 398740 367570 496760 336140 421900 378640 320420 319250 319030 326700 398430 345700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 728390000 26795 2026 25164 50346;50347 40600;40601 40601 2 9606 Homo sapiens 0.07245180025711306 THINIVVIGHVDSGK Unmodified 1587.8733 0.87328993 1560;3997;1378 Q05639;A0A2U3TZH3;A0A2R8Y488;A0A2R8Y660;A0A2R8YDN5;Q6NSH7;A0A4D5RAE1;A0A4D5RA53;A0A4D5RA40;A0A4D5RA74;A0A4D5RAA6;A0A4D5RAC3;A0A4D5RAB4;A0A4D5RAB0;A0A6Q8PFK6;Q6NS35;A0A4D5RA70;P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q9H2I7;A0A4D5RA52;A0A087WV01;A0A4D5RA61;A0A4D5RAB8;A0A4D5RBK4;A0A4D5RAF1;A0A4D5RBI9;A0A4D5RBD4;A0A4D5RBH1;A0A4D5RA69;A6PW80;A0A4D5RBL9;Q5JR01;A0A4D5RAA9;Q53GE9 EEF1A2;EEF1A1;EEF1A1P5 Elongation factor 1-alpha 2;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 6.43 1.4 1 1 1 2 2 77.605 77.63 4 1.0379E-13 11947 20230619_1888_Aki_TMTPro18x_K_F8 170.91 149.61 121140 53272 96321 107940 77684 73528 86041 76862 109960 112150 116660 110500 133610 97899 95878 143150 96496 118460 111510 49349 99660 103970 82403 77009 87046 79338 110970 111410 120020 111900 133900 103830 98470 141590 92473 112700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 452620000 26796 1378;1560;3997 25165 50348;50349;50350;50351;50352;50353;50354 40602;40603;40604 40604 3 9606 Homo sapiens 0.1028682156324976 THINYGVK Unmodified 930.49232 0.49231565 2908 E9KL44;H0YFD6;P40939;B4DRH6;A0A2R8Y4F5;A0A2R8YG21;A0A2R8Y688;P40939-2 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 1.5 0.5 1 1 37.472 37.502 3 0.00043183 9005 20230619_1880_Aki_TMTPro18x_K_F1 141.2 102.96 421140 197110 351220 363140 619580 560830 561850 544450 881930 219310 243500 188850 206320 165690 315370 203100 242310 164800 387840 182250 366650 355420 620570 551610 578800 548460 852680 239510 278020 192800 217140 173670 314080 201750 232010 157220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 393130000 26797 2908 25166 50355;50356 40605;40606 40605 2 9606 Homo sapiens 0.024289181002927762 THLASDDLYK Unmodified 1161.5666 0.5666028 2112 A8K800;Q9H7B2;Q5VXN0;B4DWS5 RPF2 Ribosome production factor 2 homolog yes no 0 0 0 4.5 0.5 1 1 42.046 42.11 3 4.785E-14 10448 20230619_1883_Aki_TMTPro18x_K_F4 201.48 157.28 145410 34571 101330 132270 149150 97570 133430 125250 173580 158650 165720 175570 208770 156330 104980 191970 155870 184130 133530 32679 107420 124890 150360 101930 136620 127010 174300 159080 172180 176820 206650 163850 111880 191640 148840 174870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175020000 26798 2112 25167 50357;50358 40607 40607 1 9606 Homo sapiens -0.007717835988614752 THLMSEEEWR Oxidation (M) 1332.5768 0.57684991 3542 P33552 CKS2 Cyclin-dependent kinases regulatory subunit 2 yes yes 0 1 0 1.5 0.5 1 1 36.295 36.324 3 0.00016714 8246 20230619_1881_Aki_TMTPro18x_K_F2 117.52 102.55 24911 11794 23254 25826 25995 32237 28133 26528 29444 24992 38689 28895 34419 29368 27084 30313 30156 29539 22961 10935 23823 24979 26871 31943 28287 27462 30247 25477 38994 29225 34907 30324 27858 30399 28819 28067 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49035000 26799 3542 25168 50359;50360 40608 40608 2203 1 9606 Homo sapiens -0.07613543935963207 THLMSEEEWR Unmodified 1316.5819 0.58193529 3542 P33552 CKS2 Cyclin-dependent kinases regulatory subunit 2 yes yes 0 0 0 2.5 0.5 1 1 41.589 41.658 3 1.0231E-05 10316 20230619_1882_Aki_TMTPro18x_K_F3 152.07 132.97 35022 19461 29048 32242 40664 41303 40695 35758 59826 41233 44223 42790 45669 39312 35672 43441 43897 44438 32273 17948 30199 31603 41341 40941 41578 37068 59185 41482 46141 43255 46105 40884 36947 43625 41925 42195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62970000 26800 3542 25168 50361;50362 40609 40609 1 9606 Homo sapiens -0.06369240073331639 THLMSESEWR Unmodified 1274.5714 0.5713706 3686 Q5T179;Q5T178;P61024;D3DV79;Q9BZU3 CKS1B Cyclin-dependent kinases regulatory subunit;Cyclin-dependent kinases regulatory subunit 1 yes no 0 0 0 4 0 1 40.683 40.725 3 4.1271E-07 9861 20230619_1883_Aki_TMTPro18x_K_F4 160.53 145.66 57650 32676 44462 48947 51203 53003 58030 56343 62195 67269 65785 59274 69007 60705 49145 59081 58782 61952 53104 30094 46391 48134 52837 53357 58236 57612 63306 67151 67398 60580 69393 62494 50911 59540 56171 58801 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102660000 26801 3686 25169 50363 40610 40610 1 9606 Homo sapiens -0.05493222727750435 THLPDFLICK Unmodified 1242.6431 0.64307898 3334 O94822;O94822-3 LTN1 E3 ubiquitin-protein ligase listerin yes no 0 0 0 1.5 0.5 1 1 55.812 55.821 3 0.013727 16952 20230619_1881_Aki_TMTPro18x_K_F2 66.19 49.25 42727 29071 34766 40417 31738 36919 41645 36649 62457 46862 48504 36870 53283 43749 37322 50755 40794 39178 39406 26727 35972 39826 33545 37583 42029 37752 61837 46568 50522 38169 53462 45272 38499 50211 38987 37340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30368000 26802 3334 25170 50364;50365 40611 40611 1 9606 Homo sapiens 0.031463166967796496 THLPGFVEQAEALK Unmodified 1538.8093 0.80929269 3528 V9HW35;P30044-2;P30044 HEL-S-55;PRDX5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 6.5 0.5 1 1 55.371 55.44 3 1.7544E-16 16178 20230619_1886_Aki_TMTPro18x_K_F6 204.35 152.07 166060 36642 117690 164730 132440 92190 150240 138790 208490 171790 178890 160240 207880 191490 124140 222590 152220 177530 152480 34853 124010 154600 136670 99700 152160 139580 207830 171620 185940 164430 207380 198020 129820 220390 145550 169000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3078199999.9999995 26803 3528 25171 50366;50367 40612;40613 40612 2 9606 Homo sapiens 0.061440414063099524 THLQDLK Unmodified 853.46577 0.46576654 1345 B7Z686;B1AHR1;A8K1X2;A0A2R8Y4H2;Q9UH03-2;Q9UH03 SEPT3 Neuronal-specific septin-3 yes no 0 0 0 6.5 0.5 1 1 39.053 39.126 3 0.0026487 8887 20230619_1887_Aki_TMTPro18x_K_F7 115.49 44.465 83634 28673 65876 90221 66957 46148 60914 59296 89610 73393 83052 78238 81944 75373 53790 83027 85497 75338 76918 26853 68502 85335 69186 50286 62672 60142 89354 73606 85380 79135 82400 78206 57101 82806 81426 71675 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77179000 26804 1345 25172 50368;50369 40614 40614 1 9606 Homo sapiens 0.03317229208937533 THLSLSHNPEQK Unmodified 1389.7001 0.70007659 2973 V9GYY3;F5H2F4;P11586;V9GZ78;B7Z809;A0A8V8TL50;A0A494C1T2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 7 0.816 1 1 1 29.712 29.763 4 2.4362E-05 5238 20230619_1887_Aki_TMTPro18x_K_F7 106.01 79.475 46413 173180 101250 70164 73034 165240 86156 81056 55123 68736 68482 73058 52084 48461 161860 51728 192050 83989 44290 157350 97787 80882 78884 158040 85248 88246 58499 70272 69199 73079 59011 51010 163650 54077 182720 79828 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 102040000 26805 2973 25173 50370;50371;50372 40615;40616;40617 40617 3 9606 Homo sapiens 0.020814555068454865 THMQDLK Oxidation (M) 887.4171 0.41710179 1949 Q8TC62;E7EPK1;A4GYY8;Q3LIE9;Q16181;Q16181-2;E7ES33;B4DUD6;B4DNE4;A8K3D0;A0A024RA87;A0A023T695;G3V1Q4;B4DPQ6;Q59EY4;D3DTZ7;J3QRT6;J3KSZ7;O43236-5;O43236-2;O43236-3;O43236;O43236-4;O43236-7 SEPT7;DKFZp686F17268;Nbla02942;SEPT4 Septin-7;Septin-4 yes no 0 1 0 5.2 0.748 1 2 2 31.219 31.277 3 0.009548 5804 20230619_1883_Aki_TMTPro18x_K_F4 88.948 31.349 191300 47529 177170 185830 278900 188550 226150 252120 283430 202970 289790 280370 261370 243400 209980 156700 282980 266780 176010 44933 182580 176130 279390 191910 232870 251780 285410 210180 295620 279760 265390 247740 218130 165250 269940 252280 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 191650000 26806 1949 25174 50373;50374;50375;50376;50377 40618;40619;40620;40621 40618 1240 4 9606 Homo sapiens -0.03111007422444345 THMQNIK Oxidation (M) 886.43309 0.43308621 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;A0A0S2Z5W9;Q9UHD8-4;Q9UHD8-8;Q9UHD8-9;A2VCQ5 SEPT9;MAFK Septin-9 yes no 0 1 0 7 0.816 1 1 1 26.081 26.141 3 0.0044739 5305 20230619_1888_Aki_TMTPro18x_K_F8 104.37 76.197 38240 12383 38978 42053 61763 47334 49409 57884 52941 26863 39021 36006 27193 27198 44643 16456 35558 29045 35231 11626 39870 40051 61848 47686 50650 57550 53084 29104 40188 35846 28981 27772 44427 17513 34064 27478 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27734000 26807 541 25175 50378;50379;50380 40622;40623;40624 40624 318 3 9606 Homo sapiens -0.01467301185539327 THMQNIK Unmodified 870.43817 0.43817159 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;A0A0S2Z5W9;Q9UHD8-4;Q9UHD8-8;Q9UHD8-9;A2VCQ5 SEPT9;MAFK Septin-9 yes no 0 0 0 8 0 1 33.795 33.791 3 0.0019798 7017 20230619_1888_Aki_TMTPro18x_K_F8 122.13 30.502 61382 11716 76200 74568 103210 78383 85123 103280 108300 48510 75751 68885 51948 47382 83532 26137 66365 51336 56599 11330 76525 70094 104300 79476 87619 102270 107480 52628 78216 68282 55288 48469 83110 28218 63559 48547 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37115000 26808 541 25175 50381 40625 40625 1 9606 Homo sapiens -0.0022299732291912733 THMVVANTMEDFQK Oxidation (M) 1665.7491 0.74907697 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 1 0 6 0 1 45.843 45.929 3 6.0026E-07 12094 20230619_1886_Aki_TMTPro18x_K_F6 129.77 110.45 59497 19110 51102 69628 63971 52126 58537 61618 72304 70114 73888 66746 75571 68156 59145 77409 73152 83370 54743 17979 52886 65814 65178 54208 59773 62543 72960 70308 75735 68000 76329 70750 61311 77918 69927 79085 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87773000 26809 3402 25176 50382 40626 40626 2020 1 9606 Homo sapiens -0.05716760310724567 THMVVANTMEDFQK Unmodified 1649.7542 0.75416235 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 6 0 1 49.284 49.362 3 0.00028558 13617 20230619_1886_Aki_TMTPro18x_K_F6 103.76 92.706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26810 3402 25176 50383 40627 40627 1 9606 Homo sapiens -0.04472456448115736 THNDIIHNENMR Unmodified 1492.6841 0.68410895 3456 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;B7Z437;B7Z9R6 EZR;HEL-S-105 Ezrin yes no 0 0 0 3.5 0.5 1 1 29.965 30.045 4 1.1768E-17 5623 20230619_1882_Aki_TMTPro18x_K_F3 186.51 169.3 18265 10444 14643 17709 33822 16319 21932 21995 29740 21284 25180 24465 27124 21702 19436 24562 16430 24051 16830 9634.1 15456 17262 33150 16784 23028 22059 29664 21658 26117 24608 27239 22632 19766 24595 15802 22821 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23497000 26811 3456 25177 50384;50385 40628 40628 1 9606 Homo sapiens -0.04252574001702669 THNEHLAGVLK Unmodified 1217.6517 0.65166983 3520 P29084 GTF2E2 Transcription initiation factor IIE subunit beta yes yes 0 0 0 7 0 1 36.338 36.405 4 0.00035812 7839 20230619_1887_Aki_TMTPro18x_K_F7 91.961 58.075 75755 22577 54215 68107 97080 70320 85099 85855 114010 57123 66548 55241 66465 53732 53543 68072 55042 53415 69606 21150 57555 64978 96934 71290 87307 85860 112440 59313 70409 56215 67222 56225 54839 67320 52638 50895 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69375000 26812 3520 25178 50386 40629 40629 1 9606 Homo sapiens 0.05155006657605554 THNLNVEYNIFEGVECR Unmodified 2092.9636 0.96363785 2811 O14531;D3DRG7 DPYSL4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 5 0 1 55.172 55.239 3 9.7745E-24 15930 20230619_1885_Aki_TMTPro18x_K_F5 207.53 196.43 45045 30625 39595 40316 40392 38450 39384 38894 41916 51642 51198 52584 54291 47395 46714 51327 44843 54366 41566 28138 40677 39897 41830 39052 39872 40053 42986 51518 52234 53142 54945 49270 47562 51678 42989 51570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63263000 26813 2811 25179 50387 40630 40630 1 9606 Homo sapiens -0.03912541961290117 THNSSLEYNIFEGMECR Oxidation (M) 2101.8833 0.88333862 1284 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 0 1 0 4 0 1 43.296 43.341 4 0.031996 11005 20230619_1883_Aki_TMTPro18x_K_F4 54.368 51.178 69969 51626 82211 65247 87126 74075 75171 66413 63791 42544 47026 44408 60546 38206 56547 51714 44286 41676 64752 47396 82425 64926 89540 74117 76161 67779 64941 44366 49641 44843 61071 40373 56865 51211 42473 39700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54527000 26814 1284 25180 50388 40631 40631 809 1 9606 Homo sapiens -0.12352771346604641 THNSSLEYNIFEGMECR Unmodified 2085.8884 0.888424 1284 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 0 0 0 7 0 1 54.22 54.283 3 3.5379E-38 15439 20230619_1887_Aki_TMTPro18x_K_F7 246.95 230.46 21032 10855 18459 19469 18689 20048 19821 16331 26888 21867 22331 22847 24081 20253 18389 25657 20223 24454 19383 10026 18973 18945 19439 20134 20128 17105 26798 21852 23198 23063 24252 21262 18944 25607 19361 23224 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45230000 26815 1284 25180 50389 40632 40632 1 9606 Homo sapiens -0.11108467484018547 THPCGHPCGGVK Unmodified 1305.5707 0.5706591 1558 H7C3U4;A0A8Q3SHQ2;A0A804HJ25;A0A8Q3SHK7;A0A804HIR9;A0A499FJI4;A0A804HKQ1;A0A804HL12;O75592-2;O75592 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 yes no 0 0 0 8 0 1 27.175 27.207 4 0.0023451 4711 20230619_1888_Aki_TMTPro18x_K_F8 82.171 37.203 5659 2194.1 7479 7914.7 7899.9 7194.5 6865.2 10610 8940 4807.4 9825.4 10724 7508.3 7032.7 7753.6 4886.6 10040 11306 5229.4 2060.3 7452 7505.6 8131 7397.7 7059.8 10441 9001.4 5346.6 9942.9 10491 7753.8 7265.1 7990.2 5313.2 9592.8 10666 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3992100 26816 1558 25181 50390 40633 40633 1 9606 Homo sapiens -0.06990340648417259 THPEEYTGPR Unmodified 1185.5415 0.54145068 1950 A4L733;Q13087-2;Q13087;B3KQU2;Q4TT66;H0Y4J5 PDIA2 Protein disulfide-isomerase A2 yes no 0 0 0 2 0 1 30.253 30.322 3 1.6632E-07 5831 20230619_1881_Aki_TMTPro18x_K_F2 167.93 134.67 26123 19158 32190 34709 34754 27061 35108 38858 42528 32873 45614 50600 44949 39661 40186 43038 50084 49624 24186 17667 32236 33664 35806 28221 35626 38731 42978 34078 46654 50195 45687 41438 41508 43559 47821 47065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108250000 26817 1950 25182 50391 40634 40634 1 9606 Homo sapiens -0.0438983840142555 THPQWYPAR Unmodified 1154.5621 0.56212655 1467 B3KM97;A0A384NL45;Q9NZ01;B3KSQ1;M0R2N5;M0R3C3 TECR Very-long-chain enoyl-CoA reductase yes no 0 0 0 2 0.816 1 1 1 36.468 36.505 3 3.1459E-05 8293 20230619_1881_Aki_TMTPro18x_K_F2 148.52 113.3 156180 108700 139950 148220 175540 232100 206680 205680 273040 45367 40632 39532 43501 36864 104150 45777 51428 35869 144160 99897 144200 147480 180800 227510 208370 207600 264350 54717 52883 40462 47267 38576 101600 45499 49608 34230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206560000 26818 1467 25183 50392;50393;50394 40635 40635 1 9606 Homo sapiens -0.008972032311248768 THQAFMR Oxidation (M) 905.41777 0.41777049 2893 Q8IUA2;E7EP60;Q6PJE7;Q59H74;P13612 IA4;ITGA4 Integrin alpha-4 yes no 0 1 0 2.5 0.5 1 1 35.746 35.803 3 0.046509 7891 20230619_1882_Aki_TMTPro18x_K_F3 55.441 31.884 81750 72748 81967 87641 93410 101570 101460 108450 129660 93420 98333 97111 106260 92716 99756 88401 112330 91080 75635 66708 83461 87487 96360 101810 102690 109880 129140 95399 102710 98266 107930 95550 102170 89116 107210 86558 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52926000 26819 2893 25184 50395;50396 40636 40636 1719 1 9606 Homo sapiens -0.038721679827290245 THQALGILSK Unmodified 1066.6135 0.61349341 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 3 0 1 44.841 44.914 3 0.00011006 11791 20230619_1882_Aki_TMTPro18x_K_F3 128.14 118.6 172630 55801 139780 169120 190900 153180 187780 186130 237250 167910 167540 147220 181110 141280 135310 179150 147140 156180 158780 52239 145610 161050 193850 156780 190940 187400 235960 170160 175570 150330 182180 147990 139310 178010 140730 148550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 758370000 26820 3578 25185 50397 40637 40637 1 9606 Homo sapiens 0.08285120742925756 THQHIPYR Unmodified 1050.5359 0.5359118 2398;544 Q5U045;Q53EZ1;B3KRV2;P49674;H0Y645;B0QY35;B0QY34;A0A669KBC0;J3QQI9;B0QY36;H0Y2N6;B4E0G1;A0A024R8X3;H7BYT1;P48730-2;P48730;B4DIJ9;Q59FJ7 CSNK1E;CSNK1D Casein kinase I isoform epsilon;Casein kinase I isoform delta no no 0 0 0 8 0 1 23.161 23.203 3 0.0024431 3823 20230619_1888_Aki_TMTPro18x_K_F8 104.06 78.32 19372 9365.5 15936 21476 25322 24598 26770 24350 27450 24123 24661 24805 24565 25838 20702 28948 25916 28644 17841 8689 16651 20702 25574 24615 26907 24892 27810 24424 25429 25197 24931 26760 21455 29000 24765 27199 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21789000 26821 2398;544 25186 50398 40638 40638 1 9606 Homo sapiens 0.012665275974313772 THSDQFLVAFK Unmodified 1291.6561 0.65608651 2521;3555 P36542-2;B4DL14;Q8TAS0;P36542 ATP5C1 ATP synthase subunit gamma, mitochondrial;ATP synthase subunit gamma no no 0 0 0 4.5 3.5 1 1 52.577 52.615 3 6.7986E-05 15444 20230619_1880_Aki_TMTPro18x_K_F1 125.72 102.89 708910 345840 664750 765530 718720 654460 809000 784370 896560 838810 879600 828120 895060 749500 759680 928560 804930 910970 653520 320640 680250 736470 743670 672850 813110 794030 907640 844450 903490 838890 906470 785270 778380 928770 770450 865040 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1505199999.9999998 26822 2521;3555 25187 50399;50400 40639;40640;40641 40639 3 9606 Homo sapiens 0.021924710805024006 THSLLLEVGR Unmodified 1123.635 0.63495714 1764 A0A8I5KTP7;A0A8I5KS24;A0A8I5QKW7;Q70HW3-2;Q70HW3 SLC25A26 S-adenosylmethionine mitochondrial carrier protein yes no 0 0 0 8 0 1 43.923 43.942 3 0.00023127 11081 20230619_1888_Aki_TMTPro18x_K_F8 116.77 86.839 18895 12957 18000 20354 19496 18905 18741 19397 30881 18563 19929 19287 18762 17841 20194 19657 21515 19809 17447 11929 18391 19918 20117 19236 19309 19765 30295 18856 20907 19503 19274 18538 20578 19737 20561 18820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14548000 26823 1764 25188 50401 40642 40642 1 9606 Homo sapiens 0.07808505771663476 THSLVCPETVSR Acetyl (Protein N-term) 1426.6875 0.68746299 4195 Q86WQ0;Q86WQ0-2;U3KQ53;F5H0B6 NR2C2AP Nuclear receptor 2C2-associated protein yes no 1 0 0 3 0 1 38.312 38.365 2 1.6045E-17 8913 20230619_1882_Aki_TMTPro18x_K_F3 128.91 112.43 12021 7028.4 11393 14857 15827 15115 15931 16093 20387 16925 14599 17469 19711 14809 15290 15637 22390 17417 11091 6504.2 11712 14346 16080 15279 16185 16395 20290 17083 15491 17602 19742 15420 16015 15801 21320 16542 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36827000 26824 4195 25189 50402 40643 40643 1 9606 Homo sapiens -0.008813239477149182 THSQGGYGSQGYK Unmodified 1368.6058 0.60584185 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2;K7EPH2;K7ERS0 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 7.5 0.5 1 1 32.363 32.412 3 1.4579E-21 6476 20230619_1888_Aki_TMTPro18x_K_F8 200.16 182.49 27351 6949.5 39339 41002 51375 35553 44850 41389 27592 30512 40499 36456 38645 26554 52000 9982.8 28682 31902 25274 6671.3 39132 38471 51982 36481 45086 41618 29618 31564 40883 36370 40046 26906 51119 11666 27691 30056 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42972000 26825 4109 25190 50403;50404 40644;40645 40645 2 9606 Homo sapiens -0.06371683315273913 THSVNGITEEADPTIYSGK Unmodified 2017.9593 0.95926398 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;E9PLT0;E9PNG3;A0A8I5KXL1;A0A8I5KYL8;Q9UG93;Q8WU01 CSDE1;UNR;DKFZp586J0620 Cold shock domain-containing protein E1 yes no 0 0 0 4.5 0.5 1 1 46.743 46.785 3 2.0175999999999999E-19 12498 20230619_1883_Aki_TMTPro18x_K_F4 172.97 166.85 69453 21220 57002 63524 54655 59733 59932 58698 80824 97113 95490 76121 111470 79107 56282 112020 70231 82281 63875 19871 58937 60538 57163 60595 60787 61061 81833 95446 97753 78424 110510 83291 59291 110210 67145 78422 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 74161000 26826 88 25191 50405;50406 40646;40647;40648 40646 3 9606 Homo sapiens -0.008997279031973449 THTCQVVMQK Oxidation (M) 1246.5798 0.5798268 362 H0YL38;B4DHL1;A0A024R5W1;Q6N043-2;Q6N043 ZNF280D;SUHW4 Zinc finger protein 280D yes no 0 1 0 8 0 1 32.036 32.041 3 0.0015327 6344 20230619_1888_Aki_TMTPro18x_K_F8 85.533 70.561 8339.2 4761.2 5156.4 6422.1 8719.2 8882.1 7836.4 8124.5 10543 8608 10251 11400 7904.9 9046.6 8801.7 9936.6 10921 11083 7672.1 4379.5 5563.3 6378.2 8758.5 8777.5 8032.3 8363 10567 8762.3 10437 11363 8203.9 9444.8 9058 10033 10430 10514 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3625600 26827 362 25192 50407 40649 40649 215 1 9606 Homo sapiens -0.033599920827782626 THTDTESEASILGDSGEYK Unmodified 2038.8967 0.89672331 3131 Q9Y3E5;J3KQ48;Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes no 0 0 0 2 0.707 1 2 1 46.981 47.033 3 3.51E-10 13157 20230619_1880_Aki_TMTPro18x_K_F1 124.29 115.47 43773 16139 32903 43297 41995 34518 44142 48774 55570 51575 56009 55393 64328 52760 37286 58481 49298 60718 40253 15050 34514 41329 42908 35877 44736 48911 55980 52085 57761 55985 64092 54825 39176 58740 47131 57605 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 289600000 26828 3131 25193 50408;50409;50410;50411 40650;40651;40652 40650 3 9606 Homo sapiens -0.08116918762016212 THTGDKPYVCR Unmodified 1332.6245 0.62446881 2300 D9IWM7;D9IWM3;B2RBP0;D9IWL5;D2K7E6;Q1RMZ5;F8WAI8;Q9NUA8 PRMD9;ZBTB40;PRDM9 Zinc finger and BTB domain-containing protein 40 yes no 0 0 1 8 0 1 31.733 31.738 4 0.00070685 6234 20230619_1888_Aki_TMTPro18x_K_F8 103.43 20.352 45658 14843 33524 40564 52317 42083 48560 49939 56688 56544 69882 54101 64415 49991 45224 58942 55944 46014 41967 13862 35373 38823 52669 42609 49426 50636 57805 56709 70695 54959 64963 52179 46990 58335 53355 43878 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9881500 26829 2300 25194 50412 40653;40654 40654 2 9606 Homo sapiens -0.028538449450934422 THTGEKPYECK Unmodified 1348.6082 0.60815004 97 O14858;A8K5U8;A0A494BZV4;A2RUI7;Q68CX9;A5HJR3;A0A024R7D7;A0A024R7B6;K7EN93;A8K4L4;A8K5C7;A0A024R0L0;B3KPL8;A0A024R7B5;Q9H942;B4DSG8;S4R3U0;F8VTV7;G3V131;K7ER43;A0A0A0MTT2;Q24JS6;A0A804HI69;Q9UQD2;A0JNV5;C9JVC3;M0QY24;A0A0A0MSW5;A0A087WVH9;K7EQV7;C9JQA6;B3KMY9;F8W0C9;B4DRB5;Q59EH4;B4DS18;A0A024R7H6;A0A494C069;A0A3F2YPB8;F8W7T7;D3YTF2;B4DUB6;A0A494C0J2;A0A494C1V2;C9JME7;Q05DD3;F5H0A9;B4DF82;B4DMI8;Q3LIC1;A0A024R799;A8K8U0;A0A8V8TMG8;A0A3B3ISA9;B4DP29;O75261;B4DNH5;B7Z4R7;B4DS70;A0A0C4DG37;Q86XA2;Q96JV1;M0R1L6;B4DF53;A0PJ55;C9J2N8;B4DXX0;Q8N7K0-2;Q15973-4;Q3KP31-2;Q9H7R0;P17017;P15621-3;Q32M78;Q96GE5;Q15973;Q96GE5-2;Q9Y2A4;Q8N8Z8-2;Q8N8Z8;Q8NHY6;Q86UE3;Q0D2J5-3;Q9H0M5;Q96MU6;A8MT65;Q96MU6-2;P15621;Q15973-1;Q96I27;Q8N7K0;Q96I27-2;Q08AG5;Q86YE8;P16415;Q0D2J5;Q96BR6-2;P52737;Q8N8L2;P17030;Q15935;Q8N972;P17030-2;Q6ZMS4;Q7L945;Q96BR6;Q96SR6-2;Q9BR84;Q147U1;P17024;C9JN71;Q9ULM2;Q8TA94;Q8NDP4;Q96SR6-3;Q14584;Q7Z3V5;Q8NDW4;Q9BS34;P58317;Q86YE8-3;Q08ER8;Q0D2J5-2;Q8IYI8;P15621-2;Q86YE8-4;P16415-2;Q86YE8-2;Q3KP31;Q9H7R0-2;Q68EA5;Q9BUY5;Q8TBZ8;Q96SR6;Q9BY31 ZNF248;DKFZp686K03205;LOC126295;ZNF426;ZNF266;ZNF823;ZNF77;ZNF571;ZNF559;ZNF433;ZNF57;ZFP28;ZNF717;ZNF546;ZNF778;ZNF700;ZNF44;ZNF799;ZNF382;ZNF440;Nbla00121;ZNF439;ZNF20;ZNF563;ZNF124;ZNF791;ZNF442;ZNF14;ZNF699;ZNF443;ZNF441;ZNF763;ZNF891;ZNF625;ZNF844;ZNF573;ZNF669;ZNF136;ZNF491;ZNF25;ZNF709;ZNF852;ZNF627;ZNF846;ZNF878;ZNF490;ZNF670;ZNF121;ZNF543;ZNF564 Zinc finger protein 433;Zinc finger protein 124;Zinc finger protein 791;Zinc finger protein 442;Zinc finger protein 14;Zinc finger protein 44;Zinc finger protein 699;Zinc finger protein 799;Zinc finger protein 443;Zinc finger protein 441;Zinc finger protein 28 homolog;Zinc finger protein 546;Zinc finger protein 763;Zinc finger protein 700;Zinc finger protein 778;Zinc finger protein 891;Zinc finger protein 625;Zinc finger protein 844;Zinc finger protein 573;Zinc finger protein 823;Zinc finger protein 669;Zinc finger protein 136;Zinc finger protein 491;Zinc finger protein 25;Zinc finger protein 77;Zinc finger protein 709;Zinc finger protein 852;Zinc finger protein 627;Zinc finger protein 382;Zinc finger protein 559;Zinc finger protein 846;Zinc finger protein 20;Zinc finger protein 878;Zinc finger protein 490;Zinc finger protein 563;Zinc finger protein 439;Zinc finger protein 266;Zinc finger protein 571;Zinc finger protein 248;Zinc finger protein 670;Zinc finger protein 121;Zinc finger protein 543;Zinc finger protein 440;Zinc finger protein 57;Zinc finger protein 426;Zinc finger protein 564;Zinc finger protein 717 yes no 0 0 1 6 0 1 33.955 34.002 4 6.4135E-06 7237 20230619_1886_Aki_TMTPro18x_K_F6 128.85 120.46 29880 5258.7 22484 28312 28778 18414 21477 21824 36804 29222 34546 31741 32559 22963 22273 15368 22788 20036 27438 5053.9 23559 26515 29145 19442 22555 22277 36514 29225 35418 31775 32761 23603 22817 15860 21779 18990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15808000 26830 97 25195 50413 40655 40655 1 9606 Homo sapiens -0.05220970901837063 THTGERPFPCPECGAR Unmodified 1870.8203 0.82028486 1967 A6NFI3 ZNF316 Zinc finger protein 316 yes yes 0 0 1 5.5 0.5 1 1 32.167 32.226 4 5.2726E-09 6599 20230619_1886_Aki_TMTPro18x_K_F6 144.73 134.53 7516.3 2800.3 5659.2 9574.5 7961.8 8794.8 9767.4 9058.2 10298 9489.6 12996 11396 12739 12814 8375.6 7604.1 11628 12059 6912.2 2626.4 5964 9081.7 8139.2 8944.3 9754.9 9253.4 10558 9630.3 13178 11529 12815 12893 8768.2 7980.9 11097 11405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9563300 26831 1967 25196 50414;50415 40656 40656 1 9606 Homo sapiens -0.0802924755330423 THTGERPNACADCGK Unmodified 1672.7046 0.7045864 4098 Q6DD87 ZNF787 Zinc finger protein 787 yes yes 0 0 1 5 0 1 27.744 27.816 4 0.012782 4922 20230619_1885_Aki_TMTPro18x_K_F5 68.972 61.933 3448.4 2220.7 5083.7 4509.5 8250.4 7412.3 4785.3 6875.5 6969.3 2234.9 5118.7 5237.3 4020.5 5329.4 3330.6 1546.8 5287 4315.5 3196.9 2052.7 5068.9 4401 8213.1 7260.8 5098.6 6929.9 6885.1 2607.6 5289.4 5183.4 4120.7 5287.4 3496 1778.4 5032.9 4073.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4521100 26832 4098 25197 50416 40657 40657 1 9606 Homo sapiens -0.1048577140420548 THTGERPYPCAECGR Unmodified 1789.7624 0.76243563 2276 B2R9V3;Q7L3S4 ZNF771 Zinc finger protein 771 yes no 0 0 1 5 0 1 27.568 27.64 4 2.9311E-07 4884 20230619_1885_Aki_TMTPro18x_K_F5 127.18 110.43 3619 0 2008.8 2463.7 3606 3266.5 2757.6 2258.8 5023.8 4311.6 5165.9 4736.2 4642.6 3868.6 3094.5 4704 4857 4443.3 3313.2 0 2200 2288.8 3600.1 3215.8 2896.7 2433.3 4992.5 4264.3 5263.5 4760 4682.1 4062.9 3280.1 4694.5 4627.2 4224.5 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6736200 26833 2276 25198 50417 40658 40658 1 9606 Homo sapiens -0.10085509478744825 THTGERPYPCPQCGK Unmodified 1786.7879 0.78792209 4610 Q9NW07 ZNF358 Zinc finger protein 358 yes yes 0 0 1 8 0 1 32.412 32.417 4 0.00048929 6465 20230619_1888_Aki_TMTPro18x_K_F8 92.939 69.14 6765.3 3970.2 5272.3 8278.3 7455.4 6316.5 7165.4 8574.3 10339 9689.9 10224 10233 9559.3 9990.1 8153.7 12768 10455 7521 6233.2 3673.2 5528.7 7970.6 7557.8 6585.9 7340.1 8631.6 10347 9749.8 10463 10362 9726.2 10441 8468.2 12481 9960.9 7209.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6896700 26834 4610 25199 50418 40659 40659 1 9606 Homo sapiens -0.07400034956344825 THTMGGDFSGK Oxidation (M) 1152.487 0.48697227 1621 B0AZS5;A0A6Q8PFA6;A0A6Q8PH57;O00139-2;A0A6Q8PGH7;A0A6Q8PG37;B4DM85;O00139-1;O00139-5;O00139;O00139-4;A0A6Q8PGG1;D6R9M0 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 1 0 5.5 0.5 1 1 33.37 33.433 3 0.0013849 7050 20230619_1886_Aki_TMTPro18x_K_F6 83.045 72.993 39991 12335 38876 40598 34666 37165 37552 40005 36163 43457 53613 60235 58052 47545 39947 50989 54253 57467 36826 11577 39525 38580 36402 37854 37695 40779 37636 44213 54402 59936 58232 49648 41790 51518 51793 54502 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34050000 26835 1621 25200 50419;50420 40660;40661 40661 1053 2 9606 Homo sapiens -0.08317173544492107 THTMGGDLSGK Oxidation (M) 1118.5026 0.50262234 1250 A8K3S3;A0A140VKF1;Q99661-2;Q99661;Q5JR91;B7Z7M6;B7Z6Q6;Q8N5N1 KIF2C Kinesin-like protein;Kinesin-like protein KIF2C yes no 0 1 0 5 0 1 31.891 31.971 3 0.042178 6378 20230619_1885_Aki_TMTPro18x_K_F5 44.616 36.691 14971 5130.7 13473 12377 16316 12054 14446 17029 21193 16022 17088 10531 17800 13501 12040 14337 14881 13113 13782 4777 13838 11897 16641 12328 14886 17011 21032 16089 17700 11066 17861 13886 12513 14321 14199 12475 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17001000 26836 1250 25201 50421 40662 40662 791 1 9606 Homo sapiens -0.05188887027452438 THTMLGSPEQPGVIPR Oxidation (M) 1734.8723 0.87230365 375 Q14807;A0A8I5QJF2;A0A8I5KQ45;A0A8I5KRF7;A0A024R632;B7Z9T5;A0A8I5KW08;A0A8I5QL17;A0A8I5KTF7;A0A8I5QKY3;A0A8I5QJC5;A0A8I5KXF9;A0A8I5KSP6;A0A8I5KXF2;H3BRB3;Q14807-2 KIF22 Kinesin-like protein KIF22;Kinesin-like protein yes no 0 1 0 7 0 1 39.786 39.851 3 1.0609E-08 9202 20230619_1887_Aki_TMTPro18x_K_F7 139.58 121.77 30582 23651 30150 29213 34482 35138 34501 33777 43027 34041 42175 34148 40086 32506 33800 40369 35447 37315 28265 21704 30720 29129 35464 35059 35048 34604 43277 34415 43155 34654 40666 34004 34610 40253 33912 35468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19527000 26837 375 25202 50422 40663 40663 229 1 9606 Homo sapiens 0.03426239132045339 THTMLGSPEQPGVIPR Unmodified 1718.8774 0.87738903 375 Q14807;A0A8I5QJF2;A0A8I5KQ45;A0A8I5KRF7;A0A024R632;B7Z9T5;A0A8I5KW08;A0A8I5QL17;A0A8I5KTF7;A0A8I5QKY3;A0A8I5QJC5;A0A8I5KXF9;A0A8I5KSP6;A0A8I5KXF2;H3BRB3;Q14807-2 KIF22 Kinesin-like protein KIF22;Kinesin-like protein yes no 0 0 0 8 0 1 43.48 43.49 3 2.3937E-06 10891 20230619_1888_Aki_TMTPro18x_K_F8 117.03 104.27 31282 27684 30414 31492 40837 37379 38889 34188 37355 35485 38219 36752 36309 31281 37568 39157 37521 35594 28933 25372 31125 31575 41468 37306 39265 35194 38181 35834 39090 37080 37179 32855 38185 39023 35887 33852 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21445000 26838 375 25202 50423 40664 40664 1 9606 Homo sapiens 0.0467054299465417 THTMTGSPGEGGLLPR Oxidation (M) 1625.7832 0.78315429 1675 H7BYN4;A0A7I2V5Y5;Q02241-2;Q02241;A0A2U3TZL8;A0A2R8Y531;H0YME6 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 0 1 0 6 0 1 36.794 36.863 3 0.00013113 8265 20230619_1886_Aki_TMTPro18x_K_F6 91.006 75.142 12371 7490.9 11393 13328 16486 14936 15289 13730 13630 16200 14011 14999 21273 14368 11984 12558 16266 18208 11413 6912.3 11740 12989 16658 14954 15430 14180 14025 16200 14674 15243 21014 14776 12587 12964 15535 17227 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21941000 26839 1675 25203 50424 40665 40665 1090 1 9606 Homo sapiens -0.004705958274598743 THTMTGSPGEGGLLPR Unmodified 1609.7882 0.78823967 1675 H7BYN4;A0A7I2V5Y5;Q02241-2;Q02241;A0A2U3TZL8;A0A2R8Y531;H0YME6 KIF23 Kinesin-like protein;Kinesin-like protein KIF23 yes no 0 0 0 7 0 1 40.462 40.53 3 6.5641E-06 9498 20230619_1887_Aki_TMTPro18x_K_F7 109.35 86.699 72470 58806 74884 72237 87073 85261 82611 81411 98825 83376 91069 78290 95461 74933 73304 94011 98316 74320 67026 53953 76021 72036 89285 85171 84059 83478 99421 84045 93877 79675 96219 78417 76415 93014 93660 70886 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14156000 26840 1675 25203 50425 40666 40666 1 9606 Homo sapiens 0.007737080351716941 THVADFAPEVAWVTR Unmodified 1697.8526 0.85255449 3402 P07814;B4DP50 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 7.5 0.5 1 1 56.738 56.794 3 2.1104999999999998E-19 16457 20230619_1888_Aki_TMTPro18x_K_F8 214.45 198.31 94064 45707 81632 86875 75103 84576 86730 87810 107500 101690 98641 104620 114370 98797 93523 115990 106730 112930 86662 42270 83889 84263 78915 85704 87433 89865 108010 102140 102330 105880 115260 103000 96321 116050 102030 107270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1840099999.9999998 26841 3402 25204 50426;50427 40667;40668 40668 2 9606 Homo sapiens 0.03154231183589218 THVDSHGHNVFK Unmodified 1376.6585 0.65854613 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 7 0 1 31.126 31.224 4 4.1827E-08 5860 20230619_1887_Aki_TMTPro18x_K_F7 168.98 143.6 24603 8875.1 15619 19536 27139 14062 23830 28936 25779 23647 29501 31323 28694 26852 14094 30223 21473 31911 22602 8245.6 16791 18776 27085 14996 24285 28378 26294 24395 30045 31308 28633 28009 15091 30364 20546 30254 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18066000 26842 2702 25205 50428 40669 40669 1 9606 Homo sapiens -0.014716804618274182 THWTLDK Unmodified 899.45012 0.45011648 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;G3V281;G3V5R2;B2RAX1;Q54A15;Q9BQL6-2;A0A8V8TN73;Q9BQL6;Q9BQL6-4 FERMT2;PLEKHC1;DTGCU2;FERMT1 Fermitin family homolog 2;Fermitin family homolog 1 yes no 0 0 0 7.5 0.5 1 1 43.439 43.484 3 0.0017807 10898 20230619_1888_Aki_TMTPro18x_K_F8 134.08 82.296 180960 77218 145200 165030 194050 180110 183200 185700 205930 196480 211570 191610 212250 170800 152430 206030 192040 207540 166560 71611 151290 159480 197240 181040 186040 189590 208750 197840 216610 194120 213700 178790 158550 206400 183470 197050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132900000 26843 385 25206 50429;50430 40670;40671 40671 2 9606 Homo sapiens -0.003630573080954491 THYDPPRK Unmodified 1012.509 0.50902834 1427;1404 P31943;G8JLB6;A0A384MEJ3;E9PCY7;H0YB39;D6RBM0;Q68DG4;H0YBD7;E5RGV0;E7EN40;A0A384MDT2;P55795;B4DFK9;B4DP00 HNRNPH1;DKFZp686A15170;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 0 1 7.5 0.5 1 1 30.606 30.663 4 0.000922 5789 20230619_1888_Aki_TMTPro18x_K_F8 116.73 90.342 336990 67715 346030 398930 528460 400170 424820 500190 454530 348270 570560 582690 506580 475220 411410 203870 541100 514400 310210 65199 353590 375010 530190 406540 435530 499940 465390 367160 577060 576780 514780 479510 425960 227420 516280 485380 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1149200000 26844 1427;1404 25207 50431;50432 40672;40673;40674 40674 3 9606 Homo sapiens 0.0032741898622816734 THYPDAFVR Unmodified 1104.5352 0.53524309 1201 A0A140VJS2;Q99811;Q5ISC7;G3V2N3;P54821-2;P54821 PRRX2;PRRX1 Paired mesoderm homeobox protein 2;Paired mesoderm homeobox protein 1 yes no 0 0 0 6.5 0.5 1 1 38.81 38.883 3 0.00017422 8802 20230619_1887_Aki_TMTPro18x_K_F7 113.71 15.673 72982 38207 59427 69051 60315 70483 69216 69855 96280 73148 95609 98501 89579 81332 85548 90777 94356 105520 67229 35292 61571 67161 62933 71090 70106 71519 96399 74567 97871 98280 91464 84940 87582 91883 90271 100030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71247000 26845 1201 25208 50433;50434 40675;40676 40676 2 9606 Homo sapiens -0.012843118423006672 THYQADIER Unmodified 1131.5309 0.530886 284 B3KN05;A0A7P0TA76;B2RBE0;A0A024R487;O95573;A0A7P0TBB1;B3KMA6;A0A7P0T8L6;Q6PIM8 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes no 0 0 0 2.5 0.5 1 1 31.299 31.373 3 2.0444E-06 6233 20230619_1881_Aki_TMTPro18x_K_F2 160.53 129.46 109040 36960 107260 111330 134210 120800 118380 132190 138500 98418 118630 102410 104940 85171 107310 94228 116500 87410 100450 34581 109490 106320 136660 121600 120930 133320 139030 101430 121950 103280 107630 88908 109500 94228 111170 83201 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 127370000 26846 284 25209 50435;50436 40677;40678 40677 2 9606 Homo sapiens -0.029618210558510327 THYSNIEANESEEVR Unmodified 1776.7915 0.79147037 1009 A0A0C4DGQ5;P04632;K7EM73;K7ELJ7;U3KQE2;K7EIV0;A0A075B7C0 CAPNS1 Calpain small subunit 1 yes no 0 0 0 1.5 0.5 1 1 31.35 31.382 3 0.05891 6570 20230619_1880_Aki_TMTPro18x_K_F1 31.876 27.774 2340.5 2815.1 3773 4347.8 4786.8 4885.7 4605.3 5259.2 4636.4 3945.2 6278.1 5402.2 4340.7 3596.8 8095.7 3131.7 6701.7 5984.8 2181.5 2586.2 3732.5 4269.7 4878.6 4906.5 4658 5310.4 4779.5 4099.8 6280.5 5358.6 4667.3 3749.4 8061 3329.7 6420.7 5656.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6889100 26847 1009 25210 50437;50438 40679 40679 1 9606 Homo sapiens -0.06585370377160871 TIADHCPDSACK Unmodified 1373.5704 0.57038433 1411 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;P35221-3;B3KSR8 CTNNA1 Catenin alpha-1 yes no 0 0 0 4 0 1 35.644 35.692 3 2.1908E-06 7795 20230619_1883_Aki_TMTPro18x_K_F4 144.57 123.01 54354 35627 55959 41596 63906 66572 61714 61887 84634 73506 55008 48122 86854 53389 35155 74043 82933 63420 50209 32700 56740 41884 65695 65327 63042 63797 83801 72941 59103 50213 85099 56102 39496 73356 78752 60420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68829000 26848 1411 25211 50439 40680 40680 1 9606 Homo sapiens -0.10145805158936128 TIAECLADELINAAK Unmodified 1630.8236 0.82362212 300 M0R0F0;A0A024R4Q8;M0R0R2;P46782;Q53G25;M0QZN2 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 0 0 0 5.3 1.79 1 1 1 2 2 2 1 65.489 65.518 2;3 9.8485E-64 20311 20230619_1887_Aki_TMTPro18x_K_F7 384.64 311.14 194910 164840 183500 177810 161240 207450 203070 200260 196050 239300 184460 198700 250420 209770 189660 288360 238040 263100 180180 151030 187030 179000 170570 207350 202160 206070 200020 238460 192770 203980 250640 220210 197150 286780 227470 250070 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3106999999.9999995 26849 300 25212 50440;50441;50442;50443;50444;50445;50446;50447;50448;50449 40681;40682;40683;40684 40683 4 9606 Homo sapiens 0.033443257723092756 TIAEIFGNPNYLR Unmodified 1506.7831 0.78307794 2051 A8K4T6;Q16401-2;Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes no 0 0 0 2.5 0.5 1 1 62.578 62.598 3 1.1323E-15 19769 20230619_1881_Aki_TMTPro18x_K_F2 154.94 108.94 43797 31501 42225 42696 43087 61609 46909 52043 68106 55448 47769 63803 68895 56657 53868 73487 74719 71925 40455 28945 43058 42433 44944 60591 47729 53889 67378 56148 50990 64122 68956 59570 56296 73428 71270 68342 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52174000 26850 2051 25213 50450;50451 40685 40685 1 9606 Homo sapiens 0.04995772234860851 TIAEQLAEK Unmodified 1001.5393 0.53932542 1002 A8K6X3;A0A0C4DG89;Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 4.5 0.5 1 1 50.742 50.774 3 0.00086903 14301 20230619_1883_Aki_TMTPro18x_K_F4 100.48 20.503 72128 63286 66885 74877 72813 85688 76751 76280 89500 84983 83685 84418 90128 81587 82006 90693 100680 92874 66685 58025 68524 74802 75337 85609 77554 78812 90242 85431 86424 85629 91452 84721 84605 91096 96097 88218 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108190000 26851 1002 25214 50452;50453 40686;40687 40686 2 9606 Homo sapiens 0.03861732860752909 TIAIIAEGIPEALTR Unmodified 1566.8981 0.8981077 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 7.5 0.5 1 1 63.736 63.759 3 3.6296E-11 19417 20230619_1888_Aki_TMTPro18x_K_F8 165.49 143.29 101470 107000 103140 103150 73970 88158 103700 100130 87599 137550 139410 98191 138360 110690 112990 124210 107240 120540 94004 97871 104200 104400 79921 90632 102430 102470 92389 135720 140250 102010 139930 114560 115090 124370 102750 114480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 632460000 26852 161 25215 50454;50455 40688;40689;40690 40689 3 9606 Homo sapiens 0.13733456645991282 TIAMDGTEGLVR Oxidation (M) 1277.6286 0.62855113 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 1 0 3.5 0.5 1 1 44.49 44.548 2 7.1447E-07 11618 20230619_1882_Aki_TMTPro18x_K_F3 160.18 139.2 321110 283770 276890 313780 390280 365820 385350 372540 415100 371970 435540 412670 415700 337680 391680 442490 417400 470200 296730 260010 286840 315190 395850 366370 389640 380100 421860 377210 444890 414800 423640 356440 400440 444350 399480 446110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 566960000 26853 3391 25216 50456;50457 40691;40692 40691 2004 2 9606 Homo sapiens 0.0008419975795277423 TIAMDGTEGLVR Unmodified 1261.6336 0.63363651 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 4 0.816 1 1 1 50.255 50.316 2 1.5268E-23 14085 20230619_1883_Aki_TMTPro18x_K_F4 246.63 210.23 707730 577030 667780 759520 651910 735250 820070 794610 862750 903220 901690 896760 1039600 836340 886570 1048900 958690 1023200 654100 529780 682100 751660 683000 746590 818430 810710 878430 906670 929300 908900 1049100 876190 909110 1048700 917020 971870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1651899999.9999998 26854 3391 25216 50458;50459;50460 40693;40694 40693 2 9606 Homo sapiens 0.013285036205843426 TIANMFGSSEK Unmodified 1183.5543 0.55432356 799 A0A087WSW7;Q6I7N8;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;F6RPV8;Q9NRZ9-4 HELLS Lymphoid-specific helicase yes no 0 0 0 1 0 1 54.929 54.929 3 0.0028494 16399 20230619_1880_Aki_TMTPro18x_K_F1 59.155 43.616 23423 18858 24968 29160 22267 26010 24474 28185 26261 28527 28702 29609 34882 28663 28590 35874 34730 35252 21668 17347 25219 28546 23408 26574 24628 28651 26770 28836 29608 29992 35104 29984 29562 35877 33173 33488 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22544000 26855 799 25217 50461 40695 40695 1 9606 Homo sapiens -0.030111433335605398 TIAPALVSK Unmodified 898.54877 0.54876789 293 A0A024R4F1;P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879;A4UCS8;K7ERS8;A0A2R8Y6I8 ENO1 Alpha-enolase;Enolase yes no 0 0 0 3.1 1.58 2 2 2 2 1 1 50.413 50.46 2;3 1.6743E-05 14268 20230619_1882_Aki_TMTPro18x_K_F3 140.11 122.88 672910 531070 574290 610210 679310 755680 705750 697120 783940 803790 836490 804580 899030 729310 778730 970050 880970 816960 621330 486980 593420 611750 698340 751860 712490 718950 796610 806670 858230 814670 909670 767430 800670 961860 841480 777810 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 24705000000 26856 293 25218 50462;50463;50464;50465;50466;50467;50468;50469;50470;50471 40696;40697;40698;40699;40700 40698 5 9606 Homo sapiens 0.09543545936958253 TIAPCQK Unmodified 816.41637 0.41637351 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;B7Z1V7;H0Y8K0;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 8 0 1 38.709 38.696 3 0.011968 8965 20230619_1888_Aki_TMTPro18x_K_F8 89.673 43.108 83662 43416 88471 88941 112380 110480 98480 119250 118670 87316 114130 137770 111680 97251 113420 77235 137800 117210 77220 40184 89814 86305 114370 110220 100790 120310 119460 91485 117380 136070 114180 100600 116430 80310 131470 110970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67126000 26857 1488 25219 50472 40701 40701 1 9606 Homo sapiens 0.0008219792849786245 TIAPLVASGAVQLI Unmodified 1351.8075 0.80750177 4422 Q9BRT9;B4DRD5 GINS4 DNA replication complex GINS protein SLD5;DNA replication complex GINS protein SLD5, N-terminally processed yes no 0 0 0 2.5 0.5 1 1 65.855 65.889 2 5.0034E-05 21160 20230619_1881_Aki_TMTPro18x_K_F2 102.06 90.651 3677.1 2302.7 3680 3498.5 3545.9 4117.9 3440.9 4020.4 2966.5 4854.7 5433.9 4545 4861.7 4506.7 4504 4914.2 4248.6 6889.3 3395.1 2120 3734.6 3442.4 3691 4112.8 3466.7 4133.5 3153.9 4848.2 5428 4629.7 4963.2 4674.3 4575.7 5040.2 4085.8 6512.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11577000 26858 4422 25220 50473;50474 40702;40703 40702 2 9606 Homo sapiens 0.14567032388367807 TIAPQNAPR Unmodified 966.52468 0.52467841 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q6DCA8;Q9NYF8-4;E9PJA7;H0YF00 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 0 6.5 1.12 1 1 1 1 34.045 34.098 2 7.8631E-05 6910 20230619_1887_Aki_TMTPro18x_K_F7 163.04 124.24 174910 95791 158200 183350 227140 237170 211750 214780 258600 174410 215980 189890 204500 179930 187850 121800 244590 193740 161280 88535 163280 178480 230060 235090 215760 219850 258790 179090 222900 191720 208390 182950 194030 127610 233120 183440 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 379300000 26859 4629 25221 50475;50476;50477;50478 40704;40705;40706 40705 3 9606 Homo sapiens 0.040077055032725184 TIAQAVYGAK Unmodified 1020.5604 0.56039521 824 A0A087WVM4;B7ZM99;Q6UB35;B2RD24 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes no 0 0 0 2 0 1 50.39 50.442 3 0.027956 14645 20230619_1881_Aki_TMTPro18x_K_F2 59.542 36.663 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26860 824 25222 50479 40707 40707 1 9606 Homo sapiens 0.05093742960275449 TIAQDYGVLK Unmodified 1106.5972 0.59717465 1476 A0A384NPQ2;Q06830;A0A0A0MSI0;B2R4P2 PRDX1 Peroxiredoxin-1 yes no 0 0 0 7 0 1 53.687 53.755 2 1.5656E-09 15198 20230619_1887_Aki_TMTPro18x_K_F7 205.59 117.23 230330 199320 226760 239620 291600 326170 296540 231720 304480 142490 149690 97306 139990 94176 381210 129110 117240 91984 213030 182790 231740 239740 297870 321070 298650 241060 303070 147840 160650 101010 154280 99199 367420 127930 114550 87853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 327410000 26861 1476 25223 50480 40708 40708 1 9606 Homo sapiens 0.048139947861727705 TIAQGNLSNTDVQAAK Unmodified 1629.8322 0.83221298 3492 P22695;H3BRG4 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 6.5 0.5 1 1 46.104 46.191 3 1.0087000000000001E-25 12192 20230619_1886_Aki_TMTPro18x_K_F6 225.29 192.86 94251 82886 92425 97789 120430 117070 131310 116870 134840 108000 124810 104290 119450 104400 114220 111510 118540 113230 87178 75993 94500 97804 123020 116960 131800 119190 136670 109570 128170 106150 121850 108060 116450 112060 113340 107550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1070999999.9999999 26862 3492 25224 50481;50482 40709 40709 1 9606 Homo sapiens 0.042490157331485534 TIAQMIEDEQR Unmodified 1332.6344 0.63436479 2335 O95359;O95359-5;Q4VXL4;O95359-2;D6RAA5;O95359-6;Q4VXL8;O95359-1;E7EMZ9;B2RWP4;O95359-3;E9PBC6;B7ZMJ9;E7EVI4;E5RFM9;B4DHF7;E7ET87;H0Y9C3;B4DH49;B4E3L7;Q5HYH0;O75410-7;O75410-9;O75410;O75410-2;O75410-6;O75410-4;O75410-5;O75410-10;O75410-3 TACC2;TACC1;DKFZp686K18126 Transforming acidic coiled-coil-containing protein 2;Transforming acidic coiled-coil-containing protein 1 yes no 0 0 0 2 0 1 55.036 55.057 2 0.033996 16640 20230619_1881_Aki_TMTPro18x_K_F2 76.655 50.141 26502 20748 24520 27402 21656 25651 25612 26460 29494 28385 27722 23850 27216 25305 29801 31639 26410 29339 24484 19053 25048 27101 22849 26084 25724 27029 29758 28451 28488 24492 27928 26382 30084 31560 25322 27880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33434000 26863 2335 25225 50483 40710 40710 1 9606 Homo sapiens -0.018647017303692337 TIATSQNR Unmodified 889.46174 0.4617438 4405 Q99623;Q99623-2;J3KPX7;Q9BXV3;U3KPZ5 PHB2 Prohibitin-2 yes no 0 0 0 5 0.816 1 1 1 29.14 29.198 2 0.009171 5547 20230619_1886_Aki_TMTPro18x_K_F6 102.51 64.192 17437 6072.3 23256 24630 45557 41073 31075 43367 28772 7799.1 20030 17170 9353.2 14357 28639 5263.1 20676 13571 16110 5727.4 23474 23526 45067 40303 32121 43143 29015 10087 20515 16942 10843 14397 28210 5980.8 19810 12828 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17352000 26864 4405 25226 50484;50485;50486 40711;40712 40712 2 9606 Homo sapiens 0.012591397152391437 TIAVQTPDGEQHLPQPLLLSR Unmodified 2312.2488 0.24884448 2992 F8W8C1;Q6ZTA4 TRIM67 Tripartite motif-containing protein 67 yes no 0 0 0 8 0 1 57.017 57.068 3 2.6269000000000003E-45 16617 20230619_1888_Aki_TMTPro18x_K_F8 254.54 225.52 69152 48723 63663 60221 41421 50667 67439 60601 83442 70862 74121 89078 77948 76945 88591 85952 89007 107450 63846 44730 64782 59782 45553 52184 66979 61543 83667 71640 76790 89148 80021 80222 89912 87438 85285 101760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 655390000 26865 2992 25227 50487 40713 40713 1 9606 Homo sapiens 0.14521001443790738 TICAILENYQTEK Unmodified 1581.7709 0.77085827 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 61.654 61.701 3 4.4484E-11 18533 20230619_1887_Aki_TMTPro18x_K_F7 182.1 160.32 425130 341900 395630 449810 324960 368530 378110 365540 398280 398560 415740 510420 533930 459000 505190 570320 577380 690280 392840 313910 403570 444250 344690 378750 378990 374880 405470 404430 431680 511310 539950 481170 518580 577770 552520 653950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1131200000 26866 3609 25228 50488;50489 40714 40714 1 9606 Homo sapiens 0.0032436770948152116 TICSHVQNMIK Unmodified 1329.6533 0.65332609 3540 Q53Z07;P32969;D6RAN4;A0A2R8Y5Y7;B4E1M5;B4DLV8;Q2NKY6;H0Y9R4 RPL9 60S ribosomal protein L9 yes no 0 0 0 2.5 0.5 1 1 45.128 45.207 3 1.4197E-09 11918 20230619_1882_Aki_TMTPro18x_K_F3 160.67 128.18 1081600 1068800 1121800 994680 1041500 1591500 1274100 1408300 1500500 385850 398520 334260 333220 312420 585270 413800 397430 319770 1001700 977580 1134900 1019500 1098000 1558800 1277800 1423200 1467800 445200 458090 342230 354770 328110 579380 409540 381530 305000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 731630000 26867 3540 25229 50490;50491 40715 40715 1 9606 Homo sapiens 0.00168556359676586 TIDDLEDK Unmodified 947.44476 0.44475633 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;A0A087WWU8;Q8NAG3;B4DWT5;J3KN67;B4DQ80;Q8NI98;A0A024R4K5;A0A0S2Z4I4;P06753-5;P06753-7 TPM3;DKFZp686J1372;OK/SW-cl.5;hCG_1787567 Tropomyosin alpha-3 chain no no 0 0 0 2 0.816 1 1 1 48.726 48.774 2 0.0010715 13597 20230619_1882_Aki_TMTPro18x_K_F3 149.65 84.615 247140 165070 214380 227520 241790 272380 237670 202410 337840 282900 294060 298480 332830 265280 210870 309330 337020 310210 228010 151750 220980 225110 249190 270390 242860 213900 336670 282330 305280 301140 332670 277150 224060 309910 321050 294730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1617599999.9999998 26868 1095;1096 25230 50492;50493;50494 40716 40716 1 9606 Homo sapiens -0.03106825681220471 TIDDLEEK Unmodified 961.46041 0.4604064 3746 P67936;V9HW56;B4DVY2;B4DTB1;A0A2R8YE05;P67936-2;K7ENT6;A0A5F9UN72;K7EPB9 TPM4;HEL-S-108 Tropomyosin alpha-4 chain yes no 0 0 0 1.5 0.5 1 1 48.399 48.434 3 0.0021037 13759 20230619_1880_Aki_TMTPro18x_K_F1 95.741 30.495 264590 187210 224710 280410 289300 354740 347890 350110 427540 335180 346520 333960 401220 312220 301950 353550 399300 362180 244150 172230 233020 276320 297420 352710 349610 357480 427560 339710 361530 338440 402950 325140 314420 354980 380850 344040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 411990000 26869 3746 25231 50495;50496 40717;40718 40717 2 9606 Homo sapiens -0.02186539164176793 TIDEGDADEVTK Unmodified 1291.578 0.57795535 1947 A4FUT8;Q7LBC6;Q7LBC6-2;B4E2P8;Q7LBC6-3 JMJD1B;KDM3B Lysine-specific demethylase 3B yes no 0 0 0 1 0 1 44.791 44.791 2 6.7373E-05 12233 20230619_1880_Aki_TMTPro18x_K_F1 145.89 102.64 9710.8 7212.1 10226 9858.6 11644 11950 11004 11154 15346 10648 14285 13959 16537 12135 10944 12029 16214 15889 8978.1 6626.7 10362 9765.6 11965 11907 11267 11437 15328 10900 14793 13961 16532 12586 11522 12303 15460 15052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16489000 26870 1947 25232 50497 40719 40719 1 9606 Homo sapiens -0.05617051086051106 TIDFDAYSVGR Unmodified 1242.5881 0.58806652 3880 X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 yes no 0 0 0 5.5 0.5 1 1 54.758 54.83 2 2.9429E-06 15745 20230619_1885_Aki_TMTPro18x_K_F5 163.38 140.36 189350 162930 189320 183050 96762 110580 117870 121700 136340 252690 262030 265970 266100 234010 221680 285810 283060 291730 175140 149320 190830 182380 108470 117700 118520 127190 143280 248540 263070 268260 269390 245150 229950 286520 270300 276990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 216580000 26871 3880 25233 50498;50499 40720 40720 1 9606 Homo sapiens -0.023523985701785932 TIDFDSLSVGR Unmodified 1208.6037 0.60371659 1284 A0A1C7CYX9;A9CQZ4 DPYSL2 yes no 0 0 0 5 0 1 57.002 57.064 2 1.5212E-16 16709 20230619_1885_Aki_TMTPro18x_K_F5 222.18 200.09 94767 82634 92346 112320 67721 80957 84022 82937 110030 102600 88429 72867 110570 78424 74352 120530 97513 84584 87646 75875 93753 110540 72827 84276 84607 85180 109790 101770 92559 75619 110340 82987 77774 118290 92986 80767 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135590000 26872 1284 25234 50500 40721 40721 1 9606 Homo sapiens 0.007758879469065505 TIDGQQTIIACIESHQFQPK Unmodified 2313.1423 0.1423305 3638 P52907;A8K0T9 CAPZA1 F-actin-capping protein subunit alpha-1 yes no 0 0 0 7.5 0.5 1 1 60.523 60.56 3 7.5075E-45 17959 20230619_1888_Aki_TMTPro18x_K_F8 247.31 243.9 103880 89872 98984 102170 84363 100510 101670 99677 104600 140580 132010 131180 145090 118430 116420 151870 139020 149120 96056 82374 100760 102190 89305 101760 101660 102990 107660 139530 134700 133160 146270 124390 120340 151810 132860 141630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 655190000 26873 3638 25235 50501;50502 40722;40723 40723 2 9606 Homo sapiens 0.038285028870177484 TIDQIHK Unmodified 853.46577 0.46576654 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C044;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 6.5 0.5 1 1 39.362 39.438 3 0.0077017 9299 20230619_1886_Aki_TMTPro18x_K_F6 92.653 38.496 394240 200590 482290 517690 554120 635920 515860 561930 562330 441000 674430 663810 613910 523910 585010 291710 729250 605210 364360 186480 483920 497580 568810 631610 524130 575950 573970 459080 683970 658630 627120 533090 601590 315490 695490 571970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 524280000 26874 1676;2901 25236 50503;50504 40724 40724 1 9606 Homo sapiens 0.03317229208937533 TIDSFTQNQTR Unmodified 1309.6262 0.62624295 1314 A0A8I5KTG3;A0A8I5KTL1;A0A8I5KT58;A0A8I5KX08;A0A8I5KZ42;A0A8I5QL22;A0A1W2PPB7;A0A8I5QJC0;E9PH70;A0A8I5KPM9;B4DK94;A0A8I5KQK7;H7C584;Q9ULH0-3;Q9ULH0-2;Q9ULH0-4;Q9ULH0;H0Y8E4;B4DGY1 KIDINS220 Kinase D-interacting substrate of 220 kDa yes no 0 0 0 6 0 1 42.955 43.049 2 9.8254E-17 10782 20230619_1886_Aki_TMTPro18x_K_F6 229.53 207.45 37424 32459 36445 35317 38130 38534 47209 41808 47834 52237 45612 46779 60866 33381 36313 62353 57532 43441 34611 29739 37126 35500 39677 38820 47076 42766 48659 52044 47551 47299 60366 36466 38666 61051 54743 41513 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30883000 26875 1314 25237 50505 40725 40725 1 9606 Homo sapiens -0.01618512655500126 TIDWVAFAEIIPQNQK Unmodified 1871.9781 0.97814893 3323 O75947;O75947-2;A0PJH2;F5H608 ATP5H ATP synthase subunit d, mitochondrial yes no 0 0 0 2 0 1 65.056 65.063 3 0.014105 20881 20230619_1881_Aki_TMTPro18x_K_F2 59.709 47.349 7042.2 5607.6 7065.1 5713.7 6548.8 7587.7 8712.7 7912.8 6504.2 7408.1 7420.8 8472.8 9497.9 9379.3 9385.7 10795 8199.8 12453 6510.8 5136.3 7161.2 5793.6 6896.1 7539.1 8591.7 8047.4 6793.8 7544.9 7674 8587.9 9629.3 9716.8 9490 10913 7886.4 11795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48155000 26876 3323 25238 50506 40726 40726 1 9606 Homo sapiens 0.07703898249178565 TIDYIQFLHK Unmodified 1276.6816 0.68157298 169 Q59G74;B4E046;K7EID0;A0A024R1W8;Q9UH92-2;Q9UH92-3;Q9UH92 MLX Max-like protein X yes no 0 0 0 2 0 1 59.049 59.062 3 0.0029622 18267 20230619_1881_Aki_TMTPro18x_K_F2 77.593 50.254 43526 42237 46119 45604 27459 36913 36549 34265 43950 41925 40022 36868 43744 37173 45126 49640 46030 40589 40314 38680 46349 45689 30298 37935 36584 35425 44199 41822 41400 37695 44597 38986 45936 49167 43995 38668 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26810000 26877 169 25239 50507 40727 40727 1 9606 Homo sapiens 0.05429945602918451 TIEAEAAHGTVTR Unmodified 1354.6841 0.68409218 3600 Q53GL5;P48735;P48735-2;Q13584;B4DSZ6;H0YL11 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] yes no 0 0 0 3.75 1.48 1 1 1 1 34.615 34.671 3 5.170399999999999E-28 7436 20230619_1882_Aki_TMTPro18x_K_F3 249.28 197.51 52840 41288 52935 60257 69521 79174 56677 62542 50338 52757 71272 81167 59750 51505 58635 52526 70809 81853 48847 37957 54055 59495 70552 78210 57747 64780 52477 54674 71709 80055 61295 54180 60284 54426 67708 77393 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209590000 26878 3600 25240 50508;50509;50510;50511 40728;40729 40728 2 9606 Homo sapiens 0.020937492699204086 TIEDDLVSALVR Unmodified 1329.714 0.71399532 693 A0A024RBS6;F5H1S9;G8JLB3;E5KMT6;E5KMT5;Q9Y606-2;Q9Y606;F5GXL3;F5H168;F5GY32;F8W9U5;F5H1B2 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial yes no 0 0 0 4 0 1 63.82 63.828 2 0.00048715 19956 20230619_1883_Aki_TMTPro18x_K_F4 106.16 72.515 31204 24941 27005 27807 21768 29947 29635 28686 32223 35637 34422 35642 39003 32493 33458 42477 35029 38524 28817 22863 27716 27886 23293 30085 29512 29581 32788 35639 35422 36081 39392 34147 34259 42278 33524 36619 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28840000 26879 693 25241 50512 40730 40730 1 9606 Homo sapiens 0.06232688215277449 TIEESEETLK Unmodified 1177.5714 0.57141341 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;B3KM27 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 1 0 1 46.952 46.952 2 1.2707E-10 13096 20230619_1880_Aki_TMTPro18x_K_F1 186.41 151.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26880 128 25242 50513 40731 40731 1 9606 Homo sapiens -0.010269442467460976 TIEIEGLR Unmodified 929.5182 0.51819605 3949 Q16352;Q59EM6 INA Alpha-internexin yes no 0 0 0 3.5 0.5 1 1 49.732 49.786 2 0.015059 13878 20230619_1883_Aki_TMTPro18x_K_F4 93.429 48.347 241010 229640 224490 172330 54524 49976 76918 100610 130310 242010 227300 212300 255890 175490 228140 297880 238600 275660 222960 209750 226390 177640 70798 61398 78411 103150 134050 235840 229750 215730 258600 188920 233460 295870 228450 261920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 557800000 26881 3949 25243 50514;50515 40732 40732 1 9606 Homo sapiens 0.050617675518992655 TIELDGK Unmodified 774.41233 0.41233399 3725;4495;452;3060 Q5U0I6;P62820;B7Z8M7;P62820-3;Q9H0U4;E9PLD0;Q6FIG4;Q9H1C9;A0A024R7I3;P61006;P61006-2;B3KTE3;H0YMN7;Q59EP4;B4DMS1;H0YNE9;Q92930 RAB1A;RAB1B;RAB8A;RAB8B Ras-related protein Rab-1A;Ras-related protein Rab-1B;Ras-related protein Rab-8A;Ras-related protein Rab-8B no no 0 0 0 3.5 0.5 1 1 47.132 47.193 2 0.0056347 12680 20230619_1883_Aki_TMTPro18x_K_F4 139.31 38.102 1297100 902710 1120100 1281900 1327600 1351200 1378200 1278800 1707100 1408000 1786000 1685100 1842300 1516000 1448800 1168300 2097500 1912200 1196900 830010 1156600 1263800 1363900 1359500 1396500 1315500 1722200 1425300 1829900 1691800 1859900 1552400 1514200 1222300 1999400 1809000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1386900000 26882 3725;4495;452;3060 25244 50516;50517 40733 40733 1 9606 Homo sapiens 0.016104317064332463 TIELDGKR Unmodified 930.51345 0.51344502 452 A0A024R7I3;P61006;P61006-2;Q59EP4 RAB8A Ras-related protein Rab-8A yes no 0 0 1 6 0 1 40.289 40.382 3 0.00093731 9681 20230619_1886_Aki_TMTPro18x_K_F6 121.09 67.124 209680 158730 200120 213270 223750 216430 215690 211410 253190 224260 246220 219190 230110 186050 214100 202850 244310 190520 193720 145810 204460 210920 230150 218560 219140 216710 255460 225850 252050 221660 234550 193930 219570 202970 233090 181290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139450000 26883 452 25245 50518 40734 40734 1 9606 Homo sapiens 0.04540883409151775 TIEQNINNLNVSEADRK Unmodified 1956.9865 0.98648179 2052 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;Q15003-2 NCAPH Condensin complex subunit 2 yes no 0 0 1 5.5 0.5 1 1 48.233 48.311 3 4.721E-48 13016 20230619_1885_Aki_TMTPro18x_K_F5 272.13 213.65 253250 186830 232000 229670 191560 254890 241890 233370 270420 303240 277630 270700 327520 270020 252680 350310 309960 306650 233870 171480 236870 228790 203940 255250 241930 241760 274410 301740 286580 276360 329110 282820 261960 348010 295990 291730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 340360000 26884 2052 25246 50519;50520 40735;40736 40735 2 9606 Homo sapiens 0.046268004278317676 TIESETVR Unmodified 933.47673 0.47672516 3189 M0QXU7;Q9UPE4;Q53G69;O43615;M0R301 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 yes no 0 0 0 1.5 0.5 1 1 35.338 35.366 2 0.00041503 7829 20230619_1881_Aki_TMTPro18x_K_F2 164.53 115.74 131640 94782 148870 168920 187170 204760 179180 172250 238960 183150 213080 223780 201090 181470 185700 142130 261400 231100 121770 87393 150510 164790 191200 203470 182920 178550 238820 185900 219350 223700 205040 186590 193010 148600 249160 218670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181750000 26885 3189 25247 50521;50522 40737 40737 1 9606 Homo sapiens 0.007325867925828788 TIEVLQLQDQGSK Unmodified 1457.7726 0.77257283 2976 F5H702;Q96GC5-3;Q96GC5 MRPL48 39S ribosomal protein L48, mitochondrial yes no 0 0 0 6 0.816 1 1 1 55.419 55.486 3 0.00069978 16039 20230619_1885_Aki_TMTPro18x_K_F5 89.359 71.992 198370 163270 186430 207400 199350 233060 221620 224270 250430 248540 239770 227600 259130 226570 223920 287890 249210 246560 183350 149840 190720 206130 206790 233470 223070 230340 253150 249280 247260 232110 262250 236920 230070 285830 238180 234630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 449690000 26886 2976 25248 50523;50524;50525 40738;40739 40738 2 9606 Homo sapiens 0.06199744789751094 TIFAYFTGSK Unmodified 1133.5757 0.57571092 1212 A0A140VJY7;Q9BRA2;I3L0K2;I3L3M7 TXNDC17 Thioredoxin domain-containing protein 17 yes no 0 0 0 5.5 0.5 1 1 62.958 63.006 2 0.012056 19480 20230619_1886_Aki_TMTPro18x_K_F6 87.806 61.114 143450 113280 126350 141440 138520 148430 159060 149410 179730 131800 133890 131950 126320 109600 155710 144110 120940 146340 132480 103960 130050 140610 143480 149590 159750 152150 179950 134220 139260 133240 130560 115620 155850 144430 116230 138880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 314790000 26887 1212 25249 50526;50527 40740 40740 1 9606 Homo sapiens 0.01426609757481856 TIFPLFMK Unmodified 995.55141 0.55141043 814 A0A087WUB9;Q8WYA6;Q8WYA6-3;Q8WYA6-2;Q8WYA6-4 CTNNBL1 Beta-catenin-like protein 1 yes no 0 0 0 6 0 1 63.997 64.043 2 0.048181 19965 20230619_1886_Aki_TMTPro18x_K_F6 71.296 40.638 28883 26709 27938 26831 23110 32169 28824 31356 39285 20443 19250 16075 14763 14595 25641 19243 19157 16996 26722 24449 28388 27178 24613 32098 29053 31786 38562 21148 20495 16489 15747 15342 25489 19159 18377 16175 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67798000 26888 814 25250 50528 40741 40741 1 9606 Homo sapiens 0.053456780702617834 TIFQGIAAK Unmodified 947.54402 0.54401687 3630 P52209-2;P52209;B4E2U0;B4DL86;K7EM49;K7EMN2;K7EPF6 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 3.5 0.5 1 1 55.4 55.426 3 0.00024944 16493 20230619_1882_Aki_TMTPro18x_K_F3 120.99 79.336 266640 227510 253880 248810 295210 418350 316620 298990 401450 241110 236260 216140 229110 191170 267290 269500 253420 242970 246530 208460 259700 251740 304840 407190 320410 312060 397090 246460 249830 219930 235940 202170 270380 268080 242530 231100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 389410000 26889 3630 25251 50529;50530 40742;40743 40742 2 9606 Homo sapiens 0.06814661794180665 TIGDMFQNQDR Oxidation (M) 1339.5827 0.58266357 167 A0A024R1W3;Q96AY3;B4DJJ5;Q8NAG5;H0Y827;Q96AY3-2 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 1 0 3.5 0.5 1 1 41.863 41.925 2 0.00023996 10414 20230619_1882_Aki_TMTPro18x_K_F3 120.76 99.986 76002 61754 65554 57280 91039 87164 94883 82633 88618 84465 105950 118560 98741 89367 99895 104350 104330 121380 70194 56518 67795 58677 92529 85842 95215 84790 91291 86290 107680 117800 101090 93910 101840 105560 99900 115040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132800000 26890 167 25252 50531;50532 40744;40745 40744 108 2 9606 Homo sapiens -0.07354445424289224 TIGDMFQNQDR Unmodified 1323.5877 0.58774895 167 A0A024R1W3;Q96AY3;B4DJJ5;Q8NAG5;H0Y827;Q96AY3-2 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 0 0 4.5 0.5 1 1 50.882 50.935 2 3.482E-12 14361 20230619_1883_Aki_TMTPro18x_K_F4 210.08 201.12 216860 168340 216790 181720 186450 258220 249350 233740 267680 284980 293170 349050 323090 274120 314670 333890 317320 378940 200460 154280 219660 183570 198150 254660 248360 241820 272770 287160 301350 348710 328370 288420 320400 337020 304010 359220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 525640000 26891 167 25252 50533;50534 40746;40747 40746 2 9606 Homo sapiens -0.06110141561657656 TIGGGDDSFNTFFSETGAGK Unmodified 2006.8858 0.88576469 2408;4144 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;F8VQQ4;B4DN58;F8VVB9;F8VRZ4;F8VS66;F8VWV9;F8VX09;F8VRK0;A0A7P0Z4A1;F8W0F6;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;P0DPH7-2;Q6PEY2;Q8N532 TUBA1B;TUBA1A;TUBA1C;TUBA2;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-3E chain no no 0 0 0 5.37 1.17 1 2 3 10 16 2 1 68.288 68.333 2;3;4 2.2549E-22 19145 20230619_1886_Aki_TMTPro18x_K_F6 182.31 165.52 1547100 1285700 1513100 1605400 1194700 1478200 1566400 1412200 1736500 1771000 1703600 1929600 1827600 1742900 1867400 1842600 2096500 2275400 1430300 1179700 1535700 1593100 1277200 1502500 1562900 1457700 1758400 1775500 1756700 1943900 1864600 1809100 1910500 1874100 2004900 2155900 17 19 20 18 20 18 18 19 21 20 22 20 20 22 20 20 21 21 163630000000 26892 2408;4144 25253 50535;50536;50537;50538;50539;50540;50541;50542;50543;50544;50545;50546;50547;50548;50549;50550;50551;50552;50553;50554;50555;50556;50557;50558;50559;50560;50561;50562;50563;50564;50565;50566;50567;50568;50569 40748;40749;40750;40751;40752;40753;40754;40755;40756;40757;40758;40759;40760;40761;40762;40763;40764;40765;40766;40767;40768;40769 40753 22 9606 Homo sapiens -0.07740276345703023 TIGGGDDSFTTFFCETGAGK Unmodified 2066.8891 0.88913551 3747 P68366-2;P68366;C9JEV8;C9JQ00;C9JJQ8;C9JDL2 TUBA4A Tubulin alpha-4A chain yes no 0 0 0 6 0 1 62.839 62.887 3 9.3624E-08 19430 20230619_1886_Aki_TMTPro18x_K_F6 102.57 97.572 30384 28666 33687 41713 36345 47024 53484 48947 61838 44569 40585 46533 51149 36363 45812 55993 47678 56996 28147 26334 34062 41101 38045 47153 53140 49764 61629 45363 43150 46814 51579 38919 46842 55969 45665 54091 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85737000 26893 3747 25254 50570 40770 40770 1 9606 Homo sapiens -0.10163349563299562 TIGISVDPR Unmodified 956.5291 0.52909508 2040 Q6NZ55;A8K4C8;P26373;J3QSB4 RPL13 60S ribosomal protein L13 yes no 0 0 0 4.71 2.37 1 1 1 1 1 1 1 46.519 46.579 2 0.00051347 11972 20230619_1887_Aki_TMTPro18x_K_F7 150.4 89.639 935390 697740 787080 893430 846990 939840 968880 933170 987260 1074000 1028600 948360 1139500 946110 948510 1148700 1152300 1161300 863320 640630 813480 886700 878540 946660 970390 957600 1007100 1074000 1057700 968800 1150400 987080 980210 1151200 1100600 1102900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3510099999.9999995 26894 2040 25255 50571;50572;50573;50574;50575;50576;50577 40771;40772;40773;40774 40773 4 9606 Homo sapiens 0.049091699261907706 TIGTGLVTNTLAMTEEEK Oxidation (M) 1922.9507 0.95067313 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 1 0 5.5 0.5 1 1 59.638 59.696 3 9.459E-14 17811 20230619_1885_Aki_TMTPro18x_K_F5 148.52 132.57 77872 62975 73282 87556 83966 80298 94305 88833 100480 94050 102450 88380 105540 85233 93198 109170 97224 110240 71966 57854 75066 86283 86548 81962 94659 90331 102070 94607 105050 89966 106990 89326 95305 109320 93074 104650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112000000 26895 1417 25256 50578;50579 40775;40776 40775 884 2 9606 Homo sapiens 0.02611582136000834 TIGTGLVTNTLAMTEEEK Unmodified 1906.9558 0.95575851 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 6 0 1 62.039 62.091 3 2.1235E-30 19036 20230619_1886_Aki_TMTPro18x_K_F6 228.84 210.94 687770 592200 634590 806850 683860 769240 830110 731070 847930 763990 735010 740130 927130 746960 893320 1001700 852190 1007500 635760 543800 650980 796280 710400 779700 828670 750930 858390 769940 768180 753260 938260 784070 907370 1002500 816840 956300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1086200000 26896 1417 25256 50580 40777 40777 1 9606 Homo sapiens 0.03855885998632402 TIGVDFLER Unmodified 1048.5553 0.55530983 748 A0A024RD41;Q9ULC3 RAB23 Ras-related protein Rab-23 yes no 0 0 0 5 0 1 57.253 57.312 2 0.0053365 16778 20230619_1885_Aki_TMTPro18x_K_F5 93.598 75.689 79323 72475 79151 78659 71619 91041 87829 85489 94572 97186 94403 93122 104380 84933 103080 108260 95294 106820 73400 66388 80322 79129 75511 90990 87840 88027 95993 97470 97319 94466 106110 89140 104440 108320 91332 101430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26566000 26897 748 25257 50581 40778 40778 1 9606 Homo sapiens 0.03297439097673305 TIGVITK Unmodified 730.45889 0.45889025 3619;1021;2880 A0A0U1RQP1;A0A0D9SFE4;A0A994J7J4;Q05193-3;Q05193;B4DHH5;A0A0D9SFB1;B7ZAC0;B4DK06;Q05193-5;Q05193-2;Q59GI5;A0A994J5P0;A0A1B0GU67;A0A1B0GUX5;P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96;K7EPK9;E5RHK8;H0YBC6;Q9UQ16-2;Q9UQ16-3;Q9UQ16;Q9UQ16-4;A0A8I5KXV5;B3KPF2;Q9UQ16-5;E5RIK2 DNM1;DNM2;DNM3 Dynamin-1;Dynamin-2;Dynamin-3 no no 0 0 0 2 0 1 47.659 47.73 2 0.011243 13385 20230619_1881_Aki_TMTPro18x_K_F2 116.9 44.954 306100 227930 268040 290490 324740 334620 335290 335760 392200 333790 412860 398500 449810 355490 364170 407780 471950 436200 282590 209270 276430 288800 333070 335080 339200 342880 396930 339520 424050 400370 453730 371020 377980 410420 450270 414130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 474610000 26898 1021;3619;2880 25258 50582 40779 40779 1 9606 Homo sapiens 0.08287916328379197 TIHAELSK Unmodified 897.49198 0.4919813 467;2262 A0A024R7P2;B7Z6M0;Q14318;U3KQ64;A0A0A0MTJ1;Q14318-3;B2R8G6;Q14318-2 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 no no 0 0 0 6.5 0.5 1 1 39.196 39.272 3 0.0011977 9216 20230619_1886_Aki_TMTPro18x_K_F6 123.21 53.58 154180 98743 156790 166130 181410 170850 163640 162290 220830 168540 198270 199800 196650 161070 196760 168240 219960 192320 142390 91020 159430 162190 185860 172200 167800 166610 220660 171060 204430 200060 200740 167850 201180 170420 210040 182520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 164590000 26899 467;2262 25259 50583;50584 40780;40781 40781 2 9606 Homo sapiens 0.039134983804160584 TIHSYQGQIISHEK Unmodified 1639.8318 0.83181904 3010 Q96PC5;Q96PC5-10;Q59FD2;Q96PC5-12;Q96PC5-7;G3V599;Q96PC5-9;Q96PC5-14;Q96PC5-8;Q96PC5-6;Q96PC5-5;Q96PC5-13;Q96PC5-11 MIA2 Melanoma inhibitory activity protein 2 yes no 0 0 0 8 0 1 38.897 38.884 4 4.2916E-16 9063 20230619_1888_Aki_TMTPro18x_K_F8 195.2 167.52 55345 38217 50012 62146 62257 64470 62835 60940 68023 67818 73358 79054 75371 64906 64579 74591 237590 93378 51086 35199 51503 60772 63691 64916 63478 62706 69232 68508 75134 79244 76600 67953 75377 75817 224650 89021 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86656000 26900 3010 25260 50585 40782;40783 40783 2 9606 Homo sapiens 0.037496408039487505 TIICHVEGFPK Unmodified 1299.6645 0.66454271 3867 Q13740-2;F5GXJ9;Q13740;B3KNN9;H7C543;Q13740-4 ALCAM CD166 antigen yes no 0 0 0 4.5 3.5 1 1 49.987 50.024 3 0.00020703 13480 20230619_1888_Aki_TMTPro18x_K_F8 110.64 86.926 252700 200170 228930 254940 316480 399080 351970 353610 462400 332190 289510 293090 406940 290650 267180 469120 335790 333490 233440 183730 236150 254770 323360 391350 355930 363590 457740 336040 310180 299620 404730 309410 279060 460330 320600 318190 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 532040000 26901 3867 25261 50586;50587 40784;40785;40786 40786 3 9606 Homo sapiens 0.026697017254718958 TIIFVETK Unmodified 949.54843 0.54843354 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 7.33 0.471 2 1 56.272 56.33 2;3 0.0011214 16272 20230619_1888_Aki_TMTPro18x_K_F8 161.02 115.3 1048700 853600 952080 1024100 839690 996070 1039600 1020800 1116200 1197900 1288400 1271000 1345700 1127600 1245100 1470800 1408100 1655100 968910 782960 974020 1020100 887190 1009900 1039400 1046200 1139900 1203100 1316300 1282700 1366800 1186500 1278300 1482000 1347400 1569100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1002799999.9999999 26902 1328 25262 50588;50589;50590 40787;40788 40788 2 9606 Homo sapiens 0.07164126217094235 TIIGDFQK Unmodified 920.49673 0.49673232 2298 B4E1C9;Q53GS5;B2RBI2;Q96A49 SYAP1 Synapse-associated protein 1 yes no 0 0 0 8 0 1 53.713 53.784 2 0.0017618 15175 20230619_1888_Aki_TMTPro18x_K_F8 123.72 42.195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26903 2298 25263 50591 40789 40789 1 9606 Homo sapiens 0.0333038252319966 TIILFTK Unmodified 834.52149 0.52149051 4665 Q9UI26;Q9UI26-2;F8WDV0 IPO11 Importin-11 yes no 0 0 0 5 0 1 59.993 60.045 2 0.048981 17913 20230619_1885_Aki_TMTPro18x_K_F5 78.77 5.9809 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26904 4665 25264 50592 40790 40790 1 9606 Homo sapiens 0.09761062396569287 TIINADKDGDGR Unmodified 1273.6262 0.62624295 4201 Q86YQ0;F6U1T9;D3YTA9;H7BYZ3;P63098 HZGJ;PPP3R1 Calcineurin subunit B type 1 yes no 0 0 1 4 0 1 39.539 39.581 3 0.0025928 9385 20230619_1883_Aki_TMTPro18x_K_F4 78.486 36.148 49903 29008 42811 48479 54123 53470 48594 54072 65749 58219 64440 58345 65853 53369 53594 64503 66176 51685 46006 26750 44271 47393 55175 53692 49859 55289 65946 58636 66176 59093 66574 55795 55463 63903 63095 49280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67450000 26905 4201 25265 50593 40791 40791 1 9606 Homo sapiens 0.0003748734452528879 TIIPLISQCTPK Unmodified 1369.7639 0.7639224 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 4 0.707 1 2 1 59.857 59.885 3 3.9767E-07 18363 20230619_1882_Aki_TMTPro18x_K_F3 155.24 142.12 110800 89518 103760 126690 91554 104920 115080 118830 117930 126490 131440 139390 148820 121200 136480 154360 148010 153680 102390 82256 105950 124560 96721 108030 114810 120690 120570 127770 135060 140330 150720 127390 139730 154500 141540 145950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5162700000 26906 297 25266 50594;50595;50596;50597 40792;40793;40794 40792 3 9606 Homo sapiens 0.09383099619572022 TIIQNPTDQQK Unmodified 1284.6674 0.66737948 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2;F8VR77 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 0 6 0.816 1 1 1 44.308 44.393 3 4.6798E-07 11053 20230619_1887_Aki_TMTPro18x_K_F7 166.29 140.64 591980 424650 519790 554140 570820 634540 636040 606690 770600 665410 685880 640330 766860 597510 599620 846100 769270 666860 546420 390040 535040 549980 591000 634840 641510 623310 773850 668880 710750 650350 771990 630890 623370 835510 733680 635660 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1880499999.9999998 26907 654 25267 50598;50599;50600 40795;40796;40797 40797 3 9606 Homo sapiens 0.03643248383991704 TIIQNPTDQQKK Unmodified 1412.7623 0.7623425 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2;F8VR77 PA2G4 Proliferation-associated protein 2G4 yes no 0 0 1 8 0 1 42.104 42.107 3 2.1799E-05 10347 20230619_1888_Aki_TMTPro18x_K_F8 125.54 91.754 39659 41239 47410 39980 61392 40822 52788 44717 29234 40430 46592 30969 27140 19817 59515 17588 16903 10232 36793 37725 47648 40546 62127 41409 53015 45318 31851 40748 46105 31502 29766 20702 57366 17448 16539 9820.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21555000 26908 654 25268 50601 40798 40798 1 9606 Homo sapiens 0.0724718185515485 TIISLDTSQMNR Unmodified 1377.6922 0.69221402 3203 O00116;B7Z3Q4;A0A7P0T984;A0A1B0GWA2;A0A7P0TAL3;A0A2R8YEL0;Q53SG6;A0A7P0T9C9;A0A7P0TAU9 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal yes no 0 0 0 8 0 1 52.313 52.39 2 1.3201000000000001E-45 14564 20230619_1888_Aki_TMTPro18x_K_F8 323.6 304.82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26909 3203 25269 50602 40799 40799 1 9606 Homo sapiens 0.01847560195051301 TIISYIDEQFER Unmodified 1512.746 0.74602373 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;C9J2Q4;C9J938;C9JB25;C9IY94;H7C310;C9IZU3;C9JQJ4 SEPT2 Septin-2 yes no 0 0 0 4.5 0.5 1 1 63.766 63.775 2 1.3724E-45 19644 20230619_1885_Aki_TMTPro18x_K_F5 309.77 267.44 41643 28681 35910 42494 29397 32282 39610 37874 39223 48655 49095 50671 52158 43998 43236 54847 46404 54289 38424 26386 36897 41632 31327 33539 39350 38618 40411 48629 50047 51120 52702 46180 44365 54876 44423 51541 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28220000 26910 3910 25270 50603;50604 40800;40801 40801 2 9606 Homo sapiens 0.0101605589841256 TILGAGPVLEAFGNAK Unmodified 1556.8562 0.85624288 2175 Q4LE74;M0R300;M0R0P8;B0I1T6;Q13459-2;Q13459 MYO9B variant protein;MYO9B Unconventional myosin-IXb yes no 0 0 0 2 0 1 63.217 63.226 3 0.0025334 20064 20230619_1881_Aki_TMTPro18x_K_F2 70.26 54.122 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26911 2175 25271 50605 40802 40802 1 9606 Homo sapiens 0.1000890095745035 TILLNTK Unmodified 801.496 0.49600404 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 3 0 1 49.748 49.823 2 0.0082168 14037 20230619_1882_Aki_TMTPro18x_K_F3 107.29 14.824 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26912 707 25272 50606 40803 40803 1 9606 Homo sapiens 0.08731587874137858 TILNLENSNK Unmodified 1144.6088 0.60880197 4208 Q8IX12-2;Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 0 0 0 7.5 0.5 1 1 51.185 51.262 2 1.2547E-09 14169 20230619_1887_Aki_TMTPro18x_K_F7 236.92 141.11 140620 119640 127030 144570 145250 173760 151610 141240 168730 165870 171750 167930 179310 144800 161770 180300 174510 185810 129960 109730 130570 144300 149750 172730 153010 147230 171080 166420 176380 169620 181880 152060 165620 180870 166930 176380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86151000 26913 4208 25273 50607;50608 40804;40805 40804 2 9606 Homo sapiens 0.0422819180953411 TILPAAAQDVYYR Unmodified 1479.7722 0.7721789 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4;B4DNJ5 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 8 0 1 55.121 55.188 2 2.7403E-11 15789 20230619_1888_Aki_TMTPro18x_K_F8 223.71 183.36 59198 41855 54958 65156 44773 77362 63711 62054 82678 82196 82484 93156 98131 78427 82897 95496 84463 105800 54660 38525 56130 63986 48082 76847 63724 65003 83156 82346 85384 93538 98891 82324 84726 96226 80946 100300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100780000 26914 3384 25274 50609 40806 40806 1 9606 Homo sapiens 0.051483698605579775 TILSDDWK Unmodified 976.48656 0.48656157 120 A0A024R104;Q12860-2;Q12860 CNTN1 Contactin-1 yes no 0 0 0 6 0 1 55.923 55.997 2 0.0003201 16461 20230619_1886_Aki_TMTPro18x_K_F6 166.68 98.921 84751 83243 101090 67322 28402 35260 50406 54157 43743 85659 117950 113670 94772 85243 108410 94163 111910 106610 78590 76061 100000 69077 35812 38628 49563 54913 47942 85604 116510 113160 98100 89311 110110 95234 107010 101140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23160000 26915 120 25275 50610 40807 40807 1 9606 Homo sapiens -0.002622252020501037 TILSLMTR Unmodified 933.53174 0.53173762 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 5.5 0.5 1 1 59.059 59.119 2 0.0088634 17770 20230619_1886_Aki_TMTPro18x_K_F6 103.42 47.242 420950 417590 391490 380780 316400 454400 394870 375370 485960 165840 154660 147070 157270 135840 266860 187940 180070 146680 389530 381880 399060 388880 337740 452080 396250 383480 475600 178950 174610 150060 165760 143190 264190 185990 172890 139880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357200000 26916 161 25276 50611;50612 40808 40808 1 9606 Homo sapiens 0.06231302059495647 TILSNQTVDIPENVDITLK Unmodified 2112.1314 0.13141469 3540 Q53Z07;P32969;D6RAN4;B4E1M5;B4DLV8 RPL9 60S ribosomal protein L9 yes no 0 0 0 6.5 0.5 1 1 62.619 62.663 3 2.6739000000000004E-25 19005 20230619_1887_Aki_TMTPro18x_K_F7 164.2 146.29 426440 431280 484850 471390 386960 484030 451840 462920 553480 544540 479640 435610 589070 443610 506730 666370 563720 579530 395340 394950 486160 473170 411860 488060 455190 476510 555450 542760 500060 447920 593530 469390 520770 660660 538920 551300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2809600000 26917 3540 25277 50613;50614 40809 40809 1 9606 Homo sapiens 0.11983423784295155 TIMEEQLVLK Unmodified 1202.6581 0.65806035 4531 Q9H845;Q9H9W4;H0Y8Z9;Q9BUX5;A0A7P0T8U3;A0A7P0T871 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 0 6 0 1 58.799 58.864 2 0.00019493 17645 20230619_1886_Aki_TMTPro18x_K_F6 121.6 69.023 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26918 4531 25278 50615 40810 40810 1 9606 Homo sapiens 0.06483763774099316 TIMHLMINNTK Unmodified 1314.6788 0.67881256 3619;1021 A0A0U1RQP1;A0A0D9SFE4;A0A994J7J4;Q05193-3;Q05193;B4DHH5;A0A0D9SFB1;B7ZAC0;B4DK06;Q05193-5;Q05193-2;A0A994J5P0;B3KU80;P50570-3;P50570-2;P50570-5;P50570-4;P50570;B4DJ53;A0A024R7C9;Q9UPH5;Q8N1K8;Q6ZSZ9;B3KUU8 DNM1;DNM2 Dynamin-1;Dynamin-2 no no 0 0 0 5 0 1 51.415 51.49 3 0.00076194 14407 20230619_1885_Aki_TMTPro18x_K_F5 93.166 76.789 147950 112630 150110 146690 107470 156690 160730 139280 164850 148680 149340 149140 168470 142740 156240 158940 150410 147580 136760 103420 151710 145470 116690 157180 159090 143840 167030 149840 154820 151180 170740 148300 158780 158850 143950 140310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117930000 26919 1021;3619 25279 50616 40811 40811 1 9606 Homo sapiens 0.03406030882115374 TINEVENQILTR Unmodified 1428.7573 0.75725712 387;1069 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;B4DFY0;B3KUX9;A1L0V1;B7Z2W3;H0YJW3;H7C5W8;H0YJ11;Q5ZEZ4;F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3;A0A0S2Z3X3;A0A0S2Z3C0 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 no no 0 0 0 4.5 0.5 1 1 55.944 56.009 2;3 8.732E-26 16618 20230619_1883_Aki_TMTPro18x_K_F4 220.69 185.73 111610 89316 97236 99567 86032 94880 119690 117060 127300 147310 139720 129890 165510 120110 126860 172540 141900 149610 103080 81873 99832 99721 91170 96842 118980 118850 129860 146670 143800 132410 166120 127080 130770 171110 135680 142310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 360980000 26920 387;1069 25280 50617;50618 40812;40813 40812 2 9606 Homo sapiens 0.06002877992568756 TINLYPLTNYTFGTK Unmodified 1744.9036 0.903587 416 B2R6U8;A0A024R6W2;O43809;Q5HYH5 NUDT21;DKFZp313O211 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 0 5.5 0.5 1 1 63.259 63.306 3 1.5495E-14 19381 20230619_1885_Aki_TMTPro18x_K_F5 189.1 160.31 200550 191130 177850 194730 170990 208880 190070 213160 188210 212750 225110 217140 212180 219800 244730 257230 244030 256310 185460 174960 182570 196660 178840 210290 190630 217390 193420 215110 228720 220470 218770 228440 248330 257820 233580 243410 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1390100000 26921 416 25281 50619;50620 40814;40815;40816 40814 3 9606 Homo sapiens 0.06093135437777164 TIPGTALVEMGDEYAVER Unmodified 1949.9404 0.9404428 1144 C9IYN3;A8K894;V9GYK2;A0A0S2Z6K1;A0A0S2Z5U3;Q8WVV9-4;Q8WVV9;B7WPG3;Q8WVV9-5 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 0 0 0 3 0 1 62.002 62.031 3 2.9908E-07 19258 20230619_1882_Aki_TMTPro18x_K_F3 118.24 103.54 126330 78999 112180 160540 184110 287030 182250 205840 349890 91673 87586 87984 106450 81745 113400 96017 95234 103730 116540 73034 116650 156750 186540 278320 188740 212690 335650 99285 103010 89389 108430 85349 114090 96748 91354 98412 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 141000000 26922 1144 25282 50621 40817;40818 40817 2 9606 Homo sapiens 0.003470192013992346 TIPIDGDFFSYTR Unmodified 1530.7355 0.73545904 1475 P05091;A0A384NPN7;Q53FB6;P05091-2;B4YAH7;F8VP50 ALDH2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 7.5 0.5 1 1 62.507 62.537 2 3.9509E-15 18947 20230619_1887_Aki_TMTPro18x_K_F7 204.17 166.83 306710 269460 321810 302390 331810 358100 351080 358220 396720 378240 459560 540740 431840 449820 580630 461140 511660 637970 283850 246930 325680 303590 344300 357980 354430 366500 403920 386120 468250 538250 449160 467380 583380 473480 491090 603610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 774650000 26923 1475 25283 50622;50623 40819;40820 40819 2 9606 Homo sapiens -0.008679267559955406 TIPLTDNTVIEEHLGK Unmodified 1778.9414 0.94142907 747 A0A024RD36;Q6DKI1;B3KMP5;A8K5J5 RPL7L1 60S ribosomal protein L7-like 1 yes no 0 0 0 5.5 0.5 1 1 55.732 55.802 4 3.2015E-14 16362 20230619_1886_Aki_TMTPro18x_K_F6 171.91 141.35 24369 25938 28118 29417 28325 32560 32630 32564 32561 27345 29217 25930 30712 23347 27262 30059 31215 34439 22605 23757 28267 29473 29511 32687 32652 33128 33027 27877 30179 26326 31119 24549 28017 30332 29851 32652 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46202000 26924 747 25284 50624;50625 40821 40821 1 9606 Homo sapiens 0.0831160163261302 TIPMDGQHFCFTR Oxidation (M) 1624.7126 0.71263189 1437 A0A384MTJ7;P30837 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes no 0 1 0 8 0 1 45.549 45.577 3 1.622E-06 11710 20230619_1888_Aki_TMTPro18x_K_F8 137.62 133.16 48546 32515 47731 46120 49356 50770 51032 49722 72571 59977 63240 59439 68267 52535 58497 65120 68691 66276 44832 29901 48563 45518 51193 50963 52018 51142 72308 60084 65503 60150 69024 55117 60252 65283 65608 62946 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41486000 26925 1437 25285 50626 40822 40822 923 1 9606 Homo sapiens -0.07473592416795327 TIPNDPGFVVTLSNR Unmodified 1628.8522 0.85222014 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7Z7T5;H3BND8 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 1 0 1 58.144 58.144 3 4.4762E-42 17703 20230619_1880_Aki_TMTPro18x_K_F1 219.41 173.4 28283 19491 24497 29075 21053 26165 29139 27494 29355 32195 27317 28240 35708 27158 29559 34626 35263 31287 26098 17933 25182 28524 22383 26693 28917 28132 29841 32159 28499 28811 35870 28460 30505 34476 33657 29767 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95471000 26926 1601 25286 50627 40823 40823 1 9606 Homo sapiens 0.06294811463749284 TIPSWATLSASQLAR Unmodified 1600.8573 0.85730551 4054 Q5SSJ5;Q5SSJ5-2;B0QZK4;Q5SWC8 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 5.5 0.5 1 1 61.601 61.653 3 5.8004E-09 18641 20230619_1885_Aki_TMTPro18x_K_F5 144.8 125.73 93668 75606 76290 88472 78964 113020 96942 109520 135640 91210 88290 85363 114300 92649 104430 100420 89544 134330 86472 69334 79098 88613 82610 112270 97873 111570 133980 93093 93938 87222 115330 95843 105530 102680 86129 127060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 314750000 26927 4054 25287 50628;50629 40824 40824 1 9606 Homo sapiens 0.08091115326374165 TIPVILDGK Unmodified 954.57498 0.57498264 4272 Q8TDD1;Q8TDD1-2;F8VRX4 DDX54 ATP-dependent RNA helicase DDX54 yes no 0 0 0 8 0 1 57.669 57.721 2 0.0026776 16885 20230619_1888_Aki_TMTPro18x_K_F8 104.2 67.499 49399 38580 42354 48776 38604 44648 47877 46917 49423 47703 52662 49307 54207 45468 49341 58533 53225 58406 45611 35412 43595 48365 40670 45509 47795 47813 50381 48216 53927 49893 55039 47723 50527 58574 50924 55456 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74315000 26928 4272 25288 50630 40825 40825 1 9606 Homo sapiens 0.09587815108432096 TIPVVFK Unmodified 802.49528 0.49527576 3503 Q6FI51;Q6FHS4;P25685;A0A7I2V3K7;P25685-2;B4DKK9 DNAJB1 DnaJ homolog subfamily B member 1 yes no 0 0 0 3 0 1 56.734 56.77 2 0.0077445 17093 20230619_1882_Aki_TMTPro18x_K_F3 122.79 59.948 149360 128590 126430 167210 153130 188320 161190 154250 204340 195440 212790 203460 189950 173540 210550 211460 227220 220050 137980 118020 131020 165850 157440 187990 163360 161090 206020 195620 216900 205210 195670 181970 214660 212370 217190 208940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 305780000 26929 3503 25289 50631 40826 40826 1 9606 Homo sapiens 0.08612793225097448 TIPWLEDRVPQK Unmodified 1480.8038 0.80381338 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;B4E337;B4DSX0 ACTN4 Alpha-actinin-4 yes no 0 0 1 1 0 1 55.639 55.639 3 2.6118E-05 16652 20230619_1880_Aki_TMTPro18x_K_F1 125.03 88.712 85662 79454 98052 114080 121250 111830 95745 103920 99193 119330 115050 96584 124940 86691 143150 111480 106560 97069 79371 72984 98974 112270 123210 113120 98203 107120 101660 119030 117670 98797 127880 91156 143040 110930 102240 92384 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107790000 26930 1069 25290 50632 40827 40827 1 9606 Homo sapiens 0.0826436261447725 TIPWLENR Unmodified 1027.5451 0.5450795 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;G3V2W4;A0A494C1A0;P35609;P35609-2;A0A804HI95;B7Z2N5;B7Z4K1;Q59FD9;B7Z4P6 ACTN1;ACTN2 Alpha-actinin-1;Alpha-actinin-2 yes no 0 0 0 4.5 3.5 1 1 56.257 56.286 2 0.0036592 16276 20230619_1888_Aki_TMTPro18x_K_F8 118.74 85.193 304690 206330 260460 278330 219810 305590 335350 317350 387610 399600 339880 361410 429240 319960 358760 426960 375210 405350 281100 189630 267900 275510 235280 306990 332940 325560 390240 398260 355010 367140 431610 337310 367340 425920 359050 385120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 206240000 26931 387 25291 50633;50634 40828;40829 40829 2 9606 Homo sapiens 0.03240876163067696 TIPYSDK Unmodified 822.41233 0.41233399 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DQY2;Q16891-3;B4DT20;Q3B7X4;B4E2B5;Q05DN3;D6RAW4 IMMT MICOS complex subunit MIC60 yes no 0 0 0 6.5 0.5 1 1 44.146 44.233 2 0.0063399 11324 20230619_1886_Aki_TMTPro18x_K_F6 133.79 56.296 234780 138800 242970 282160 392120 377650 330990 340530 404750 298990 375180 362980 383180 327850 336190 216350 440130 376220 216780 128360 248580 274070 393490 373630 339460 349270 406660 306590 386550 364200 388680 333690 347680 228600 419670 355880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 440960000 26932 3954 25292 50635;50636 40830 40830 1 9606 Homo sapiens -0.005975682935741133 TIQAHEGFVR Unmodified 1156.5989 0.59890598 801 A0A087WT20;Q9NV06;B3KME9 DCAF13 DDB1- and CUL4-associated factor 13 yes no 0 0 0 6 0 1 36.243 36.303 3 3.0131E-14 8081 20230619_1886_Aki_TMTPro18x_K_F6 195.8 153.32 84129 65108 78330 96799 81087 96974 96620 95288 101780 110470 117220 109850 114200 90611 98829 117830 125510 115860 77721 59870 80223 95095 84484 97957 96690 97887 104040 110780 119350 110930 115890 95574 102340 117810 119760 110100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120560000 26933 801 25293 50637 40831 40831 1 9606 Homo sapiens 0.026870485947938505 TIQDLVSLK Unmodified 1015.5914 0.59136099 1136 B3KQF0;A0A0S2Z5M1;Q9UGP8;B3KNE7;B3KWU4 SEC63 Translocation protein SEC63 homolog yes no 0 0 0 1.5 0.5 1 1 60.956 60.962 3 0.00017569 18903 20230619_1880_Aki_TMTPro18x_K_F1 129.28 98.71 51786 40840 45782 54331 47818 59634 52921 51812 60578 46672 41775 41923 47197 40014 48878 50605 49157 51899 47828 37505 47097 53804 49721 59693 53288 53346 60510 47336 44002 42726 48088 41910 49698 50750 47050 49270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57613000 26934 1136 25294 50638;50639 40832 40832 1 9606 Homo sapiens 0.08418896274508825 TIQFVDWCPTGFK Unmodified 1597.7599 0.75989966 4144 Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;P0DPH7-2;C9J2C0;Q9NY65-2;Q9NY65;Q6PEY2;Q7Z3M3;A0A7P0T945;Q8N532;A0A7P0TA31;V9GZ17 TUBA1A;TUBA1C;TUBA2;TUBA8;TUBA3E;DKFZp686L04275 Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain yes no 0 0 0 2.5 0.5 1 1 63.176 63.195 2 7.029299999999999E-21 19734 20230619_1882_Aki_TMTPro18x_K_F3 273.24 224.44 375830 363660 471340 537670 369630 463990 506020 429540 416930 504050 498930 481350 530120 428050 610320 514840 445130 569050 348650 334120 469860 527430 395470 473730 499660 443680 433430 504550 509670 487900 543430 448160 609610 519310 428350 539460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1112500000 26935 4144 25295 50640;50641 40833;40834 40834 2 9606 Homo sapiens -0.015069898741785437 TIQQLETVLGEPLQSYF Unmodified 1965.0095 0.0095086389 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;B4E263;A2VDI1;B3KWS1;Q8N7L7;B7ZAU8;Q96ES5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 7 0 1 68.574 68.594 3 0.013982 21556 20230619_1887_Aki_TMTPro18x_K_F7 58.09 44.373 1987.6 1881.5 1990.5 2188.4 1672.1 3176.3 1391.3 2131.2 2458.7 2098.3 2663.4 1495.5 2592.9 1918.2 2824.2 3215.3 1943 1542.7 1839.7 1724.4 2019 2196.8 1767.7 3109.4 1455.6 2245.8 2450.7 2106.5 2712.1 1568 2656.3 2032.4 2821.4 3115.8 1864.8 1484.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2240100 26936 2332 25296 50642 40835 40835 1 9606 Homo sapiens 0.06560426492615079 TIQRPVTMGDEGGLR Unmodified 1628.8304 0.83043884 1003 Q59GQ7;A0A0C4DGA6;Q14527-2;Q14527;A8K5B6;H7C5K0 HLTF Helicase-like transcription factor yes no 0 0 1 6.5 0.5 1 1 41.12 41.203 3 0.000833 10041 20230619_1886_Aki_TMTPro18x_K_F6 83.106 54.13 39008 28668 44317 44980 38889 51198 42814 47181 52809 45834 58999 62183 57264 48729 55095 52546 67409 58859 36087 26385 44507 44145 40995 51162 43285 48441 53435 46897 60187 61924 58405 50905 56722 53111 64318 55869 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53802000 26937 1003 25297 50643;50644 40836 40836 1 9606 Homo sapiens 0.04117683443541864 TIQRPVTMGDEGGLRR Oxidation (M) 1800.9265 0.92646449 1003 Q59GQ7;A0A0C4DGA6;Q14527-2;Q14527;A8K5B6;H7C5K0 HLTF Helicase-like transcription factor yes no 0 1 2 8 0 1 32.971 32.971 4 1.0172E-06 6683 20230619_1888_Aki_TMTPro18x_K_F8 119.96 103.84 22837 18221 24563 26132 27066 30778 22968 26123 27839 29346 29292 29554 32986 26410 28601 29597 34338 36967 21126 16746 24852 25788 27816 30654 23567 27086 28168 29492 30146 29882 33333 27538 29482 30099 32817 35023 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53674000 26938 1003 25298 50645 40837 40837 566 1 9606 Homo sapiens 0.05803831283628824 TIQVENSHLILTGAGALNK Unmodified 1978.0847 0.084739268 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 2 0 1 55.036 55.057 3 2.7936E-31 16601 20230619_1881_Aki_TMTPro18x_K_F2 230.06 202.86 95680 81201 102140 92889 50259 59874 69316 68621 72343 104200 94731 91472 112080 83373 91796 131720 101830 105860 88543 74435 102360 92487 56837 63292 69010 70507 74573 102940 96867 93224 112790 88854 94481 130020 97365 100800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363490000 26939 3833 25299 50646 40838 40838 1 9606 Homo sapiens 0.1348202874371509 TIQVPQQK Unmodified 940.53418 0.53418046 4336 Q96DI9;Q9BY77;F8WCX5;Q659C6 POLDIP3;DKFZp434G0310 Polymerase delta-interacting protein 3 yes no 0 0 0 1 0 1 43.336 43.336 3 0.008531 11590 20230619_1880_Aki_TMTPro18x_K_F1 79.906 59.577 36044 30245 36007 39664 44966 53818 37423 41143 53300 30564 42678 46978 41391 33340 38561 32244 48304 45982 33334 27764 36736 39446 45861 53034 38667 42623 52893 32002 44254 46470 42151 34799 39760 33211 46107 43537 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52908000 26940 4336 25300 50647 40839 40839 1 9606 Homo sapiens 0.0615347378881097 TIRPMDMETIEASVMK Unmodified 1850.894 0.89402665 1402 A0A384MDR8;P11177-3;P11177-2;P11177;C9J634 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes no 0 0 1 7 0 1 60.901 60.944 3 0.0044502 18188 20230619_1887_Aki_TMTPro18x_K_F7 61.186 48.419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26941 1402 25301 50648 40840 40840 1 9606 Homo sapiens 0.0026153977410103835 TIRYPDPLIK Unmodified 1214.7023 0.70230842 2202 Q96IR1;B2R491;P62701;Q53HV1;Q8TD47 RPS4X;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 0 0 1 2.5 0.5 1 1 50.585 50.646 3 0.0010363 14769 20230619_1881_Aki_TMTPro18x_K_F2 95.618 63.12 1016700 1039900 1054500 930150 1078500 988430 1048700 1130400 1127700 1138400 1055900 959100 1165300 824330 1028300 1281600 1186300 1115000 941870 950730 1067300 950640 1115800 999760 1062200 1144700 1142300 1144300 1090900 978100 1178400 879670 1058100 1270300 1133100 1061100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 769300000 26942 2202 25302 50649;50650 40841;40842 40841 2 9606 Homo sapiens 0.10354535982583002 TISASTQVQGGDFNLYENMR Oxidation (M) 2246.0274 0.027360323 4008 Q53SW3;Q9BPU6 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 1 0 6 0 1 52.864 52.941 3 2.4816E-11 15173 20230619_1886_Aki_TMTPro18x_K_F6 125.79 120.7 21076 20310 27200 24551 19449 20512 21309 18975 22494 29201 34670 29877 31167 27224 29240 30809 29344 34614 19557 18620 26983 24403 20840 21026 21442 19784 23349 28976 34811 30223 31824 28364 29784 31112 28112 32817 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46171000 26943 4008 25303 50651 40843 40843 2646 1 9606 Homo sapiens -0.045812263148036436 TISDGTISASK Unmodified 1078.5506 0.55061839 4057 Q5T0N5-3;Q5T0N5-4;Q5T0N5-2;Q5T0N5-5;Q5T0N5;B4DSW1;B4DSI7;A0A075B6Q2 FNBP1L Formin-binding protein 1-like yes no 0 0 0 6 0 1 44.052 44.143 2 2.3495E-11 11296 20230619_1886_Aki_TMTPro18x_K_F6 198.25 165.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26944 4057 25304 50652 40844 40844 1 9606 Homo sapiens 0.014485101642549125 TISETIER Unmodified 947.49238 0.49237523 2326 P26639;Q53GX7;B2RDX5;P26639-2;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 39.73 39.793 2 7.5358E-05 9694 20230619_1881_Aki_TMTPro18x_K_F2 183.89 121.18 636710 509760 590650 567080 618900 693900 599960 593380 817690 819370 896210 921420 919820 727670 733680 1013300 1056700 970980 588310 467270 604060 569850 640730 689940 612940 619160 823940 819170 916690 924350 929130 772210 768660 1010400 1007300 923000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 699800000 26945 2326 25305 50653;50654 40845;40846 40845 2 9606 Homo sapiens 0.01652873309626557 TISFREEQEK Unmodified 1265.6252 0.62518031 1532 A0A3B3IUD7;Q14690 PDCD11 Protein RRP5 homolog yes no 0 0 1 3 0.816 1 1 1 41.36 41.42 3 0.0005665 10046 20230619_1883_Aki_TMTPro18x_K_F4 106.58 66.928 194270 171270 173900 187810 229090 199170 236370 224220 234020 237440 253200 219460 256230 218600 238750 273510 276160 234140 179570 156920 179220 188560 233340 201320 237790 227680 239370 238690 258810 223800 260610 228380 245320 271690 263570 222960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 257760000 26946 1532 25306 50655;50656;50657 40847 40847 1 9606 Homo sapiens 0.00299272975621534 TISSYTAFSR Unmodified 1131.556 0.55603811 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8;Q6JH03;Q6JH02 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 3 0 1 47.746 47.825 2 3.075E-16 13157 20230619_1882_Aki_TMTPro18x_K_F3 186.78 137.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26947 1863 25307 50658 40848 40848 1 9606 Homo sapiens -0.0044776625329632225 TISTSDPAEVLVK Unmodified 1358.7293 0.72931103 567 A0A024R9D2;Q86UE4;E5RJU9 MTDH Protein LYRIC yes no 0 0 0 5.2 0.748 1 2 2 55.28 55.338 2;3 2.785E-06 15996 20230619_1885_Aki_TMTPro18x_K_F5 168.74 108.94 97042 90824 113430 120620 88232 106340 118940 102390 116220 126510 110270 128280 139940 106470 115800 139000 128080 164150 89938 83353 113550 119170 94450 108510 118060 105620 118430 126590 114840 129340 140660 112380 118990 140470 122670 155510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 457860000 26948 567 25308 50659;50660;50661;50662;50663 40849;40850 40849 2 9606 Homo sapiens 0.06429555012459787 TITEYAR Unmodified 852.43413 0.43413207 3432 Q59GM9;P11216;B4DSD8;H0Y4Z6;Q8TDG6 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 5 0.816 1 1 1 38.834 38.906 2 0.0051615 9071 20230619_1883_Aki_TMTPro18x_K_F4 143.02 59.219 255660 191960 225410 283270 320520 319270 308870 308510 371020 324760 446620 424760 391100 372990 392980 386300 485030 427800 236050 176530 233260 278850 324960 319850 313990 316400 377120 330490 452100 425080 401340 386950 404590 390390 462780 406100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 478480000 26949 3432 25309 50664;50665;50666 40851;40852 40851 2 9606 Homo sapiens 0.0020123645499552367 TITGNSAAVITPFK Unmodified 1418.7769 0.77692993 2039 A8K4B4;Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6 NUSAP1 Nucleolar and spindle-associated protein 1 yes no 0 0 0 3.5 0.5 1 1 57.033 57.052 3 4.5194E-07 17221 20230619_1882_Aki_TMTPro18x_K_F3 136.6 123.62 67877 57271 60069 65006 61216 65310 61742 59187 66792 56950 55011 44725 59868 47899 47067 51402 54570 42326 62716 52497 61706 65029 63513 65905 62388 60850 67286 57336 57129 46099 60325 49504 48518 51090 52055 40342 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53262000 26950 2039 25310 50667;50668 40853 40853 1 9606 Homo sapiens 0.08429254003294773 TITLEVEPSDTIENVK Unmodified 1786.92 0.92002493 1332;3737 Q5RKT7;A0A248RGE3;P62979;B2RDW1;Q96H31;Q5U5U6;Q9UFQ0;Q96C32;Q96MH4;L8B196;F5H747;J3QKN0;L8B4R0;A8K674;L8B4J3;L8B4Z6;L8B4M0;Q66K58;F5GXK7;Q5PY61;P0CG48;L8B4I8;B4DV12;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H265;F5H2Z3;Q5UGI3;F5H388;Q59EM9;P0CG47;Q49A90;M0R1V7;F5GZ39;J3QSA3;P62987;Q3MIH3 RPS27A;HEL112;UBC;UBB;DKFZp434K0435;UbC;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 no no 0 0 0 4.25 1.48 1 1 1 1 59.469 59.508 2;3 9.8896E-112 18435 20230619_1881_Aki_TMTPro18x_K_F2 361.82 311.71 78008 59484 74038 81890 61917 90267 69735 71732 111960 85674 79793 68269 102960 81247 64975 100760 97028 129560 72070 54653 75422 80928 65754 90147 71167 74936 110340 85426 84253 70615 102550 84528 68716 102410 92751 122640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 508900000 26951 1332;3737 25311 50669;50670;50671;50672 40854;40855 40854 2 9606 Homo sapiens 0.05804171813247194 TITSEDVAEMHNILK Unmodified 1699.8451 0.84508585 3599 P48426;P48426-2 PIP4K2A Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha yes no 0 0 0 6 0 1 56.087 56.161 3 0.0001268 16505 20230619_1886_Aki_TMTPro18x_K_F6 94.717 71.481 27668 21174 29350 28631 30318 37630 41994 35853 42168 38539 39383 44328 44824 41261 37930 53282 46449 52392 25587 19450 29702 28419 31741 37308 41644 36831 42828 38993 40811 44646 45280 43279 39249 53252 44401 49749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53337000 26952 3599 25312 50673 40856 40856 1 9606 Homo sapiens 0.023157108010309457 TITSSYYR Unmodified 989.48181 0.48181054 3725;4495 Q5U0I6;P62820;E7END7;Q92927;Q9H0U4;Q6FIG4;Q9H1C9 RAB1A;rab1b;RAB1B Ras-related protein Rab-1A;Ras-related protein Rab-1B no no 0 0 0 3.67 3.09 1 1 1 40.19 40.21 2 2.4516E-07 10157 20230619_1880_Aki_TMTPro18x_K_F1 214.14 168.76 977270 836270 777130 698970 1267400 1773100 991510 1038900 1898000 114230 97362 149790 164730 150530 334700 173470 206850 175420 902390 764640 813420 731450 1275800 1693800 1041900 1086400 1804800 170570 188060 151240 175040 156390 329380 174590 198930 166710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 738030000 26953 3725;4495 25313 50674;50675;50676 40857;40858;40859 40857 3 9606 Homo sapiens -0.013351093448022766 TITSTYYR Unmodified 1003.4975 0.4974606 3926 Q15286;Q15286-2 RAB35 Ras-related protein Rab-35 yes no 0 0 0 1 0 1 40.811 40.811 2 0.019174 10463 20230619_1880_Aki_TMTPro18x_K_F1 89.752 71.022 77153 72968 91630 75818 111600 130030 107260 97961 141770 56265 62106 70185 63800 58485 64454 77012 87385 75917 71521 66806 92100 77086 114290 126630 109380 101170 139020 59724 67609 70274 65200 61660 66858 76992 83308 72160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79283000 26954 3926 25314 50677 40860 40860 1 9606 Homo sapiens -0.004148228277699673 TITVALADGGRPDNTGR Unmodified 1712.8806 0.88056015 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 1 7 0.816 1 1 1 44.026 44.091 3 3.4107E-48 10925 20230619_1887_Aki_TMTPro18x_K_F7 279.57 257.91 369390 272470 330680 333510 321540 314320 361490 363620 377470 389950 456800 524700 453970 430760 436730 506390 513640 562980 341060 250070 338960 331690 335510 320580 362830 368880 386800 396630 465330 523290 462950 451200 449050 510620 491050 533940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 818400000 26955 1637 25315 50678;50679;50680 40861;40862 40862 2 9606 Homo sapiens 0.05263509373025954 TITVVQR Unmodified 815.4865 0.48650199 4611 Q9NW64-2;Q9NW64 RBM22 Pre-mRNA-splicing factor RBM22 yes no 0 0 0 7.5 0.5 1 1 38.357 38.382 2 0.010707 8815 20230619_1888_Aki_TMTPro18x_K_F8 117.62 35.235 79107 55860 73164 78750 98038 94898 91382 92149 115520 96342 101430 104890 104630 86719 89753 88011 122470 103670 73040 51354 75211 77838 99630 94684 93248 94427 115730 97437 104880 105430 106000 90154 93310 89317 116730 98365 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50256000 26956 4611 25316 50681;50682 40863 40863 1 9606 Homo sapiens 0.07137819588626826 TITYQAVPSEVPNEEPK Unmodified 1900.9418 0.941823 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;Q9BY44-2;H7C5R5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 4 0.816 1 1 1 52.044 52.098 3 0.0001719 14936 20230619_1883_Aki_TMTPro18x_K_F4 86.548 75.074 120640 100060 134070 127410 125060 144450 134900 137870 164590 137850 161070 153640 192300 159030 148330 179830 162280 158000 111670 91823 134900 126670 130930 144600 136420 141300 165770 139890 166690 155570 193140 164940 152540 179090 155110 150320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 641280000 26957 4468 25317 50683;50684;50685 40864;40865;40866 40865 3 9606 Homo sapiens 0.027389765618181627 TIVEAASDEER Unmodified 1218.5728 0.57281039 4615 Q9NWY4 C4orf27 UPF0609 protein C4orf27 yes yes 0 0 0 1 0 1 41.223 41.223 2 7.211899999999999E-40 10608 20230619_1880_Aki_TMTPro18x_K_F1 310.47 253.81 101140 77577 82024 95747 98977 108810 85684 88518 94485 100680 114280 110420 119660 104540 92128 130550 137410 120520 93334 71193 85232 95342 101170 108590 87485 92170 96601 101410 116500 111530 120710 109360 96870 130100 130920 114640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166630000 26958 4615 25318 50686 40867 40867 1 9606 Homo sapiens -0.02773310157999731 TIVEFECR Unmodified 1052.4961 0.4960804 4614 Q9NWV4;D3DQ38 C1orf123 UPF0587 protein C1orf123 yes no 0 0 0 3.5 0.5 1 1 48.009 48.069 2 0.015357 13270 20230619_1882_Aki_TMTPro18x_K_F3 93.162 63.087 175680 151840 194950 187850 183080 220780 219540 196970 224420 254670 246090 252380 221170 210930 264060 220720 242310 265700 162650 139280 196260 187200 192130 220170 219410 204460 229350 254170 250550 254730 228670 219450 266330 224320 232210 251800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 602820000 26959 4614 25319 50687;50688 40868 40868 1 9606 Homo sapiens -0.02806780188166158 TIVFVETK Unmodified 935.53278 0.53278348 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3QSF1 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 7.5 0.5 1 1 54.043 54.112 3 0.0013456 15305 20230619_1888_Aki_TMTPro18x_K_F8 115.49 44.575 381700 310970 347850 386400 334640 408830 389060 382630 419060 403740 378940 321330 414820 333820 322030 477050 394080 359110 352680 285330 356250 384280 350480 411010 390090 393290 423720 404490 391780 330820 417770 351500 333930 470030 376110 342460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 483740000 26960 3137 25320 50689;50690 40869;40870 40870 2 9606 Homo sapiens 0.062438397000505574 TIVHESER Unmodified 969.48796 0.48795855 1127 B3KM48;A0A0S2Z5H7;D6RAX7;Q9BT78;D6RFN0;Q9BT78-2;D6RD63 COPS4 COP9 signalosome complex subunit 4 yes no 0 0 0 5 0 1 27.774 27.846 3 0.02673 4950 20230619_1885_Aki_TMTPro18x_K_F5 68.735 47.833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26961 1127 25321 50691 40871 40871 1 9606 Homo sapiens 0.0019940888671499124 TIVMGASFR Unmodified 980.51134 0.51133653 1232 A0A140VK56;P37837-2;P37837;F2Z393 TALDO1 Transaldolase yes no 0 0 0 4 0.816 1 1 1 49.517 49.579 2 0.0019439 13772 20230619_1883_Aki_TMTPro18x_K_F4 111.06 45.184 190130 172850 177580 156120 180900 253270 219710 203820 269550 73250 67992 68413 72095 56888 113660 79054 78093 75889 175830 158100 181460 160470 189200 247530 220610 208130 263080 81296 79542 69416 75475 60257 112690 79018 75047 72121 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154000000 26962 1232 25322 50692;50693;50694 40872 40872 1 9606 Homo sapiens 0.020301313996924364 TIVQSGGIK Unmodified 901.52328 0.52328142 2366 B3KNU0;P52306-4;P52306;P52306-5;B7Z4M5;P52306-6;P52306-2;P52306-3;B7Z2V8 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes no 0 0 0 1.5 0.5 1 1 44.223 44.264 2 0.00016085 12006 20230619_1880_Aki_TMTPro18x_K_F1 145.72 79.041 74972 59361 75773 77287 94536 110200 83721 82463 104080 66199 86033 73262 71258 60481 91573 71443 98462 83634 69317 54499 77201 76979 96498 108270 85663 85724 104010 68086 88424 73697 74182 63408 93020 72362 94038 79361 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93868000 26963 2366 25323 50695;50696 40873 40873 1 9606 Homo sapiens 0.06858071414535516 TIVTDVFQGSMR Oxidation (M) 1368.6708 0.6707503 2722 B9A018;Q53GS9;B7Z7L9;A0A087X1B2;Q53GS9-3;Q53GS9-2;B3KPG7;B3KMG1 USP39 U4/U6.U5 tri-snRNP-associated protein 2 yes no 0 1 0 1 0 1 54.319 54.319 3 0.027035 16142 20230619_1880_Aki_TMTPro18x_K_F1 48.524 36.731 15027 14057 14439 15990 14627 16171 14932 18164 22260 17300 17002 19075 18561 18785 18285 20419 18291 22321 13903 12881 14727 15998 15202 16387 15270 18387 22042 17594 17775 19273 18904 19462 18612 20594 17528 21166 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9150600 26964 2722 25324 50697 40874 40874 1630 1 9606 Homo sapiens 0.0011617516634032654 TIVTNEYMK Oxidation (M) 1113.5376 0.53761086 3601 P48739;P48739-2;P48739-3;B2R7P6;B3KYB6;B3KYB7 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 1 0 6 0 1 44.859 44.948 2 4.9754E-05 11707 20230619_1886_Aki_TMTPro18x_K_F6 161.27 29.652 36595 27763 26737 34075 28149 34090 33556 34235 46014 36302 43558 38533 41532 33166 31382 52841 55105 48753 33747 25478 28050 33888 29344 34468 33899 35024 46024 36666 44662 38897 41987 35432 33516 52481 52451 46373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86467000 26965 3601 25325 50698 40875 40875 2270 1 9606 Homo sapiens -0.014616442195119816 TIVTNEYMK Unmodified 1097.5427 0.54269624 3601 P48739;P48739-2;P48739-3;B2R7P6;B3KYB6;B3KYB7 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 0 0 7 0 1 49.221 49.305 2 6.285E-05 13264 20230619_1887_Aki_TMTPro18x_K_F7 129.38 28.277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26966 3601 25325 50699 40876 40876 1 9606 Homo sapiens -0.002173403568804133 TIVTNEYMKDDFFIK Unmodified 1862.9124 0.91243713 3601 P48739;P48739-2;P48739-3;B2R7P6;B3KYB6;B3KYB7 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 0 1 8 0 1 61.34 61.372 3 0.037157 18355 20230619_1888_Aki_TMTPro18x_K_F8 49.354 31.437 155910 134170 161840 143180 134050 158040 172590 158130 132960 186160 172840 154900 154570 132450 190200 132340 133880 125840 144260 122900 163400 144180 142400 158720 170640 162290 139500 185550 174660 157820 159930 137380 189350 132850 128590 119620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65161000 26967 3601 25326 50700 40877 40877 1 9606 Homo sapiens 0.01549741011945116 TIVYWGIGR Unmodified 1063.5815 0.581465 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 5 0 1 57.812 57.871 2 0.0014467 17022 20230619_1885_Aki_TMTPro18x_K_F5 132.08 106.26 147000 137110 141500 123590 107910 148910 135010 139700 168410 104960 88542 60918 90979 75067 125250 91635 94870 76555 136010 125400 143610 126420 115780 148460 135610 142380 166310 106750 94609 64450 94402 77882 124890 91093 90938 72940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55532000 26968 1853 25327 50701 40878 40878 1 9606 Homo sapiens 0.05221753059799994 TIYAGNALCTVK Unmodified 1309.67 0.67002202 1075 P13804;A0A0S2Z3L0;A0A0S2Z3M4;P13804-2;H0YLU7;A0A8I5KVL5;A0A8I5KYH4;A0A8I5KUF3;H3BV91;H0YKF0;A0A8I5KUR2;A0A8I5KVC9;H0YK49 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes no 0 0 0 2.5 0.5 1 1 52.199 52.251 3 0.0012782 15155 20230619_1882_Aki_TMTPro18x_K_F3 72.958 54.822 376530 310570 371630 435560 448190 489070 459610 476330 568510 451940 577020 685870 498270 474280 618210 550130 678750 689580 348150 285320 379480 430110 459890 490080 466120 486940 572740 465220 589160 678190 517190 499990 629490 559630 648910 653450 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 354800000 26969 1075 25328 50702;50703 40879;40880;40881 40881 3 9606 Homo sapiens 0.02757380517277852 TKAEQFYCGDTEGKK Unmodified 1760.8039 0.80394931 2470 Q02218;Q02218-2;E9PDF2;B4DF00;E9PCR7;Q02218-3;B4DH65;A0A140VJQ5;A2VCT3;A2VCT2;B4E3E9;B4DK55;E9PFG7;B4DZ95 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 2 8 0 1 43.056 43.066 4 0.064478 10734 20230619_1888_Aki_TMTPro18x_K_F8 46.704 38.104 21074 20817 23906 24066 28678 25027 30830 27435 21916 28410 33440 21018 21147 12895 32994 16416 15328 10183 19533 19074 24119 24061 29377 25313 30689 27891 23300 28405 33171 21419 22468 13775 32275 16151 14800 9756.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10303000 26970 2470 25329 50704 40882 40882 1 9606 Homo sapiens -0.046020502384862993 TKDDIIICEIGDVFK Unmodified 1764.8968 0.89678707 4742 Q9Y512 SAMM50 Sorting and assembly machinery component 50 homolog yes yes 0 0 1 7 0 1 63.236 63.269 4 0.0015797 19331 20230619_1887_Aki_TMTPro18x_K_F7 82.248 57.195 42315 43055 53900 55752 53847 58403 57400 53771 61387 52332 58789 49890 59226 47822 64834 47770 46213 42495 39276 39493 53801 55290 55985 58751 57800 55235 62180 52916 60423 50712 60652 49402 64705 47780 44370 40432 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100260000 26971 4742 25330 50705 40883 40883 1 9606 Homo sapiens 0.04493454494877369 TKDEPQRETLK Unmodified 1343.7045 0.70449327 810 B4DPP0;A6NNI4;A0A2R8Y478;A0A7I2V3T7;G8JLH6;A0A087WU13;F5GXT1;P21926;A0A7I2V3T0;Q56CY1;B4DK09 CD9;BTCC-1 Tetraspanin;CD9 antigen yes no 0 0 2 5.5 0.5 1 1 35.134 35.206 4 0.020818 7694 20230619_1886_Aki_TMTPro18x_K_F6 66.498 44.023 73380 56722 80882 185720 365530 278470 126880 126020 146300 145540 191260 165010 155170 142290 197410 102920 204820 143790 67886 52916 86237 177510 349800 271140 142310 139860 150020 146790 192440 165820 161570 145450 199840 106690 195470 136360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107920000 26972 810 25331 50706;50707 40884;40885 40885 2 9606 Homo sapiens 0.04638919929743679 TKDGQILPVPNVVVR Unmodified 1633.9515 0.95154025 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 1 3 0 1 52.843 52.902 3 0.0036404 15437 20230619_1882_Aki_TMTPro18x_K_F3 73.722 49.379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26973 617 25332 50708 40886 40886 1 9606 Homo sapiens 0.15992254148477514 TKEELALEK Unmodified 1059.5812 0.58119023 730 P25440-2;P25440;P25440-3;A0A0G2JK44;A0A140T9E9;H0Y6K2;A0A024RCR5;X5CF57;A0A1U9X7A8;P25440-4;A0A1U9X7B8;A0A1U9X7B4;A0A1U9X7B3;A0A140T9I1;A0A0G2JHN8 BRD2 Bromodomain-containing protein 2 yes no 0 0 1 5 0 1 45.555 45.633 3 0.022202 11895 20230619_1885_Aki_TMTPro18x_K_F5 67.214 31.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26974 730 25333 50709 40887 40887 1 9606 Homo sapiens 0.05378288549286481 TKFEECR Unmodified 968.43857 0.43856552 1241 A0A140VK94;F6WQW2;P43487-2;P43487;C9JXG8;D3DX26;C9JGV6;B3KUP2 RANBP1 Ran-specific GTPase-activating protein yes no 0 0 1 5 0.816 1 1 1 35.155 35.219 3 0.090566 7606 20230619_1885_Aki_TMTPro18x_K_F5 59.8 44.412 294630 157250 290010 291860 326220 367420 323080 289250 352690 313370 385660 333300 337010 283610 387900 167390 347260 267660 271810 145290 295550 284400 335970 363770 326850 301660 358720 316170 391780 335530 347770 288230 390020 176500 332090 253450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 642080000 26975 1241 25334 50710;50711;50712 40888 40888 1 9606 Homo sapiens -0.04691622393738726 TKFEECRK Unmodified 1096.5335 0.53352853 1241 A0A140VK94;F6WQW2;P43487-2;P43487;C9JXG8;D3DX26;C9JGV6;B3KUP2 RANBP1 Ran-specific GTPase-activating protein yes no 0 0 2 4.5 3.5 1 1 35.428 35.423 3;4 0.023542 7657 20230619_1888_Aki_TMTPro18x_K_F8 92.732 74.868 668430 345820 658650 641010 719020 676660 637730 723810 762350 645610 817810 717380 711600 618580 632090 332640 890930 604520 616590 319580 670440 623290 739170 682420 652120 733890 771250 658900 830970 721210 726090 626600 656570 355270 847950 572350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 299140000 26976 1241 25335 50713;50714 40889;40890 40890 2 9606 Homo sapiens -0.010876889225755804 TKFENLCK Unmodified 1038.5168 0.51681584 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7;Q58FG0 EL52;HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 yes no 0 0 1 1.5 0.5 1 1 45.01 45.051 3 0.0037785 12340 20230619_1880_Aki_TMTPro18x_K_F1 100.48 48.75 1833300 1564400 1520500 1495600 1767200 1936700 1885500 1844600 2237100 1315100 1176300 914890 1257100 967200 1130000 1496100 1455300 910250 1693200 1431800 1574200 1523100 1820300 1923600 1904100 1876100 2214400 1347300 1258600 950960 1274700 1023800 1171100 1461200 1385500 872770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3152299999.9999995 26977 3177 25336 50715;50716 40891;40892 40891 2 9606 Homo sapiens -0.0009018980852033565 TKFPAEQYYR Unmodified 1301.6404 0.64043645 2916 E9PGT1;Q15631;B3KRM8;H7C1D4;B7Z5D9;Q53GR3;Q15631-2 TSN Translin yes no 0 0 1 1.5 0.5 1 1 44.117 44.158 3 0.069726 11695 20230619_1881_Aki_TMTPro18x_K_F2 46.068 30.529 517470 413480 461870 509200 511490 549410 497720 541140 554590 470890 500560 461050 449510 403090 574360 444560 453750 373890 477990 379380 474770 506910 527060 552360 504590 551440 559410 479440 513930 466670 466340 419690 574450 442660 434760 356160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 948040000 26978 2916 25337 50717;50718 40893 40893 1 9606 Homo sapiens 0.001681845634493584 TKGDFILVGDLMR Unmodified 1463.7806 0.7806351 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5;Q16531-2 DDB1 DNA damage-binding protein 1 yes no 0 0 1 2 0 1 60.939 60.949 3 6.4092E-06 19003 20230619_1881_Aki_TMTPro18x_K_F2 127.18 101.06 210150 201210 220850 230800 173590 222860 205740 203200 218370 212420 189980 147590 172770 141230 239360 166270 161030 118980 194610 184370 222820 230600 185110 225490 206080 209240 220660 212240 195380 152630 179920 147240 237490 164320 154540 113670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120800000 26979 1710 25338 50719 40894 40894 1 9606 Homo sapiens 0.06729600505536837 TKPADMVIEAYGHGQR Oxidation (M) 1787.8625 0.86246725 2819 D3DSW3;O94903;E5RG77;A8K520;E5RFZ4 PROSC Proline synthase co-transcribed bacterial homolog protein yes no 0 1 1 7.5 0.5 1 1 41.328 41.362 4 1.3039E-07 9816 20230619_1887_Aki_TMTPro18x_K_F7 133.71 125.41 41318 32120 44261 41432 41864 36723 51433 42343 45952 43725 53210 54799 46210 36777 47242 55801 47204 52847 38216 29488 44658 41034 43818 37648 51130 42949 47384 44433 53968 54536 47411 39531 48071 55576 45204 50205 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121290000 26980 2819 25339 50720;50721 40895 40895 1682 1 9606 Homo sapiens 5.05112666360219E-05 TKPADMVIEAYGHGQR Unmodified 1771.8676 0.86755262 2819 D3DSW3;O94903;E5RG77;A8K520;E5RFZ4 PROSC Proline synthase co-transcribed bacterial homolog protein yes no 0 0 1 8 0 1 45.789 45.827 4 8.3088E-12 11796 20230619_1888_Aki_TMTPro18x_K_F8 168.68 158.04 98925 75659 90824 96176 89638 109030 100030 101780 105460 107150 103400 118250 115470 104750 105480 133240 120270 114760 91374 69455 92962 95605 93574 109070 100450 104620 107100 108340 106830 119080 117050 109940 108400 132330 114890 109210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255250000 26981 2819 25339 50722 40896 40896 1 9606 Homo sapiens 0.012493549892951705 TKPFPWGDGNHTLFHNPHVNPLPTGYEDE Unmodified 3315.5374 0.53737494 684 Q9UEG9;O95101;H6SG15;A0A024RBN6;P12074 COX6A1 Cytochrome c oxidase subunit 6A, mitochondrial;Cytochrome c oxidase subunit 6A1, mitochondrial yes no 0 0 1 7.5 0.5 1 1 55.549 55.61 5 1.2447E-21 15982 20230619_1888_Aki_TMTPro18x_K_F8 168.57 161.68 105180 106130 131270 130730 124730 175190 133110 136420 164460 111230 125480 134710 152190 124890 148190 138550 136250 141360 97594 97301 131130 130560 130570 172770 134720 141370 164060 114630 131840 135400 154250 129880 150040 139220 130520 134210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 388040000 26982 684 25340 50723;50724 40897;40898 40897 2 9606 Homo sapiens -0.027772248974088143 TKPIVKPQTSPEYGQGINPISR Unmodified 2409.3016 0.30160833 2084 A8K622;Q59F99;O95793-2;O95793-3;O95793;B3KRE0 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes no 0 0 2 4 0 1 46.901 46.943 4 1.4591000000000001E-30 12555 20230619_1883_Aki_TMTPro18x_K_F4 207.24 203.13 248900 221170 245370 260470 211910 236020 262900 251420 250900 328400 321350 270280 348130 251190 265460 321290 285760 233370 230250 202770 249140 259570 224060 240950 261880 257890 259440 325820 327140 276510 350150 263570 272800 316710 272850 222780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 508340000 26983 2084 25341 50725 40899;40900 40899 2 9606 Homo sapiens 0.153329595066225 TKPIWTR Unmodified 900.51814 0.51813647 751;3177;4018 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q14568;Q58FG0;A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF8 EL52;HSP90AA1;HSP90AA2P;HSP90AA5P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 0 0 1 5.5 1.12 1 1 1 1 40.886 40.958 3 0.030154 9872 20230619_1886_Aki_TMTPro18x_K_F6 73.26 50.241 5558000 4660200 5010600 5192100 5811600 5944500 5929600 5428600 5525300 6445900 6506000 5175400 6765900 5031800 6227100 5825900 5466500 3512500 5136000 4271100 5148100 5211200 5971800 5945200 5959800 5609000 5696600 6420100 6632200 5310000 6864000 5237800 6296600 5715800 5224100 3367800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33632000000 26984 3177;751;4018 25342 50726;50727;50728;50729 40901 40901 1 9606 Homo sapiens 0.06389812342558798 TKPPLDHNASATDYK Unmodified 1656.8107 0.81074925 1605 A0A6I8PIX7;O95425-2;O95425-4;O95425-3;O95425 SVIL Supervillin yes no 0 0 1 7 0 1 39.404 39.468 4 6.4662E-05 9022 20230619_1887_Aki_TMTPro18x_K_F7 99.747 79.084 27933 17891 24319 29363 37589 39589 46199 44722 48985 44183 35296 33319 47664 33051 32934 54473 44224 36243 25766 16486 25250 28828 38209 39354 46124 45292 49220 44356 37376 34350 47523 35251 34488 53310 42149 34647 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29691000 26985 1605 25343 50730 40902 40902 1 9606 Homo sapiens 0.00861630704412164 TKPSDEEMLFIYGHYK Oxidation (M) 1972.9241 0.92406445 3396 P07108;B8ZWD1;A0A024RAF2;B8ZWD9;P07108-3;P07108-2;P07108-4;P07108-5;P07108-6 DBI Acyl-CoA-binding protein yes no 0 1 1 6.5 0.5 1 1 50.805 50.882 4 0.0028367 14025 20230619_1887_Aki_TMTPro18x_K_F7 75.018 56.48 271990 236780 295480 302180 251710 278040 261960 232490 270570 324520 368710 400210 332360 313100 369110 415970 397960 419680 251780 217260 297540 299450 265100 282000 264020 243390 279230 325250 372410 399890 342320 331080 376560 416420 380640 398490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 580250000 26986 3396 25344 50731;50732 40903 40903 2008 1 9606 Homo sapiens -0.023480619647216372 TKPSDEEMLFIYGHYK Unmodified 1956.9291 0.92914983 3396 P07108;B8ZWD1;A0A024RAF2;B8ZWD9;P07108-3;P07108-2;P07108-4;P07108-5;P07108-6 DBI Acyl-CoA-binding protein yes no 0 0 1 7.4 0.8 1 1 3 55.201 55.268 4;5 1.2481E-10 15823 20230619_1888_Aki_TMTPro18x_K_F8 150.28 129.61 755390 587660 785010 707380 436640 669470 651510 450260 718440 995690 687480 994550 981020 865730 962390 1171000 988600 1152900 698500 539140 789400 704160 488310 674670 646630 490630 728830 976930 722110 1004000 991380 913290 981600 1170100 946770 1094600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2748500000 26987 3396 25344 50733;50734;50735;50736;50737 40904;40905;40906 40906 3 9606 Homo sapiens -0.011037581020900689 TKPSEDSLSGQK Unmodified 1275.6307 0.63065962 1885 A0A994J7P9;P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 yes no 0 0 1 6 0 1 39.18 39.268 3 0.00017595 9226 20230619_1886_Aki_TMTPro18x_K_F6 107.2 75.504 36043 20069 41093 49022 54822 67323 46769 57128 57755 40418 58783 69703 61725 58107 58342 34669 74491 72587 33300 18627 41585 47288 55699 66367 47992 58599 58189 42664 60468 68973 62792 59096 60136 37423 71103 68549 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25763000 26988 1885 25345 50738 40907 40907 1 9606 Homo sapiens 0.003869517674047529 TKPSTVEVLESIDK Unmodified 1544.8298 0.82975336 4483 Q9C0E8-2;Q9C0E8;Q9C0E8-4;C9JM95;C9JL94 LNP;KIAA1715 Protein lunapark yes no 0 0 1 6.5 0.5 1 1 55.295 55.364 3 0.00036839 15902 20230619_1887_Aki_TMTPro18x_K_F7 102.99 75.344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26989 4483 25346 50739;50740 40908;40909 40909 2 9606 Homo sapiens 0.07913167275478372 TKPVTGNLRPEEALQALTIYEGK Unmodified 2527.3646 0.36460252 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 2 3 0 1 60.578 60.607 4 5.4953E-14 18650 20230619_1882_Aki_TMTPro18x_K_F3 143.98 134.61 35977 29462 35872 36769 32377 36302 40210 39208 35755 44703 43124 44401 47880 39657 42735 50875 45528 49478 33267 27033 36405 36536 34100 36812 39967 40005 37018 44849 44122 44933 48461 41662 43748 50842 43561 46995 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18909000 26990 3881 25347 50741 40910 40910 1 9606 Homo sapiens 0.16201480504059873 TKPYIQVDIGGGQTK Unmodified 1603.857 0.85697116 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 1 2 0 2 50.184 50.236 3;4 2.4879E-18 14541 20230619_1881_Aki_TMTPro18x_K_F2 169.64 132.05 1105300 872370 985480 1138800 1057400 1264300 1320800 1280000 1411500 1541600 1594100 1842100 1272600 1661200 1039800 2161300 1269900 1700000 1020900 800950 1013400 1129600 1100600 1268900 1319100 1313600 1440300 1552900 1614200 1850400 1302100 1742200 1080800 2134800 1215800 1617900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2704500000 26991 3429 25348 50742;50743 40911;40912;40913 40912 3 9606 Homo sapiens 0.07919695606483401 TKQDEVNAAWQR Unmodified 1444.7059 0.70589025 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 1 6.5 0.5 1 1 41.026 41.107 3 3.4661E-07 9978 20230619_1886_Aki_TMTPro18x_K_F6 160.52 146.71 281820 248240 257550 241670 287620 326010 319240 333110 371370 362960 363440 369170 391810 294690 355150 344630 350400 280570 260530 227210 264040 245960 297400 323530 321670 340420 375140 365360 374550 371850 396930 309130 361430 342060 334830 267430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 481020000 26992 1022;3868 25349 50744;50745 40914 40914 1 9606 Homo sapiens 0.0013255401850074122 TKTEQFQAR Unmodified 1107.5673 0.5672715 4517 Q9H501 ESF1 ESF1 homolog yes yes 0 0 1 8 0 1 34.32 34.312 3 0.0056969 7219 20230619_1888_Aki_TMTPro18x_K_F8 76.332 56.028 54347 31017 58485 62822 85560 89931 64335 83725 71760 48238 74167 62125 55327 44961 60918 26987 56442 31192 50190 28687 59487 61121 86122 88672 66389 84941 72678 51086 75083 61871 57295 45993 61399 27781 53872 29675 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32647000 26993 4517 25350 50746 40915 40915 1 9606 Homo sapiens 0.01779055840847832 TKVEAFQTTISK Unmodified 1351.7347 0.73473076 892 Q86SZ7;Q2TNB3;A0A087X1Z3;Q9UL46;H0YM70;Q6FHK9 PSME2 Proteasome activator complex subunit 2 yes no 0 0 1 2 0 1 49.203 49.268 3 4.6114E-07 14111 20230619_1881_Aki_TMTPro18x_K_F2 157.38 129.41 325890 255390 334840 347120 354940 381430 458750 441310 413650 427090 491430 452480 413140 316940 490920 356550 358480 330160 301330 234590 339870 343510 369510 384400 455120 446300 426910 432880 497090 453560 427330 333580 489780 356720 344080 313970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 333740000 26994 892 25351 50747 40916 40916 1 9606 Homo sapiens 0.07293278594920594 TLAAEMQELR Unmodified 1160.586 0.58595803 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24;E2PSM9 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 4 0 1 52.543 52.566 2 2.5562E-05 15183 20230619_1883_Aki_TMTPro18x_K_F4 157.59 116.6 148020 140820 147120 150080 148170 173880 156150 167650 179500 181240 180710 180900 190480 150620 173400 199870 186530 196590 137010 128950 149570 151190 154140 173910 157780 172010 181660 182400 185780 182670 193210 159030 177500 199800 178410 186720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 322020000 26995 2414 25352 50748 40917 40917 1 9606 Homo sapiens 0.01208849420390834 TLADLIR Unmodified 800.4756 0.47560295 3953 Q16878 CDO1 Cysteine dioxygenase type 1 yes yes 0 0 0 7 0.816 1 1 1 51.391 51.468 2 0.0051349 14132 20230619_1888_Aki_TMTPro18x_K_F8 143.23 0 1163400 994440 1029600 1049400 1113200 1316800 1199600 1151200 1368200 752620 734330 583000 692230 542300 930330 808630 772230 570710 1075000 910900 1058500 1059200 1153200 1307500 1209200 1176900 1357200 778120 781030 599390 719050 574820 932370 795470 738990 545320 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1569899999.9999998 26996 3953 25353 50749;50750;50751 40918;40919;40920 40920 3 9606 Homo sapiens 0.06738417214330639 TLAEIAK Unmodified 744.43815 0.43815481 1112;2614 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;C9JYS8;C9IZL7;A0A0S2Z4E7;C9J4X2;B4DWI8;Q8WXF1;A0A024RDP4;Q8WXF1-2;X6RDA4 NONO;PSPC1 Non-POU domain-containing octamer-binding protein;Paraspeckle component 1 no no 0 0 0 6 0.816 1 1 1 48.357 48.438 2 0.0079071 12829 20230619_1887_Aki_TMTPro18x_K_F7 121.52 14.199 1513800 1190400 1312500 1444000 1724800 1769300 1755600 1652100 2117300 1763200 1921500 1940500 1989100 1725700 1629100 1835200 666290 1911300 1397900 1092100 1357000 1441600 1759600 1762100 1778700 1699000 2127800 1782300 1983300 1954400 2009400 1792800 1611600 1846400 655420 1810000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2314500000 26997 1112;2614 25354 50752;50753;50754 40921 40921 1 9606 Homo sapiens 0.05571325948710637 TLAEIAKVELDNMPLR Unmodified 1811.9815 0.98151975 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;C9JYS8;C9IZL7;A0A0S2Z4E7;C9J4X2 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 1 8 0 1 63.164 63.187 3 2.6669E-14 19163 20230619_1888_Aki_TMTPro18x_K_F8 169.61 151.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26998 1112 25355 50755 40922 40922 1 9606 Homo sapiens 0.1080082503151516 TLAEINANRADAEEEAATR Unmodified 2043.9821 0.98212469 3849 Q13409-2;Q13409-3;Q13409-6;Q13409;Q13409-5;Q13409-7;A0A140VKE9;B4DPZ3;Q59GU5;Q9H5W7;B4DX93 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 1 1.5 0.5 1 1 43.912 43.953 3 1.7793E-60 11628 20230619_1881_Aki_TMTPro18x_K_F2 301.57 273.02 150390 165190 166750 164770 166930 168890 178350 181940 175940 205270 193140 181230 196960 154610 193200 231740 218440 204580 139490 151120 168000 166630 173460 170920 179180 185560 180250 205360 197480 184280 200660 164480 198130 229990 208660 194650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 262720000 26999 3849 25356 50756;50757 40923;40924 40923 2 9606 Homo sapiens 0.0018929121429209772 TLAESALQLLYTAK Unmodified 1520.845 0.84500949 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 3.5 0.5 1 1 65.183 65.205 3 1.043E-08 20497 20230619_1883_Aki_TMTPro18x_K_F4 153.81 134.57 56260 45630 47210 55699 43358 54163 57446 50712 53907 56409 55350 57579 65312 55020 60964 60868 66985 73406 51950 41862 48716 55396 45770 54797 56988 52235 55200 56741 57190 58307 66135 57177 62400 61774 64077 69565 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60878000 27000 1292 25357 50758;50759 40925;40926 40926 2 9606 Homo sapiens 0.10542078863340976 TLAESALQMLYAAK Unmodified 1508.7909 0.79086543 4740 Q9Y4G6;A0A1B0GVU7;G1UI21;H0YMT1;H0YN01 TLN2 Talin-2 yes no 0 0 0 3.5 0.5 1 1 65.053 65.075 3 4.6055E-05 20427 20230619_1883_Aki_TMTPro18x_K_F4 101.53 85.308 10106 9179.8 12854 9821 8764.1 13638 14137 15218 15022 15075 15095 16207 12972 14551 15766 12870 16016 15614 9372.4 8407.9 12757 9929.4 9592.5 13528 13977 15422 15252 15274 15406 16333 13464 14963 15980 13127 15319 14803 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9903500 27001 4740 25358 50760;50761 40927 40927 1 9606 Homo sapiens 0.05682163440110344 TLAFSIPILMQLK Unmodified 1473.8629 0.86290816 4710 Q9Y2R4;B3KM65;Q59H21 DDX52 Probable ATP-dependent RNA helicase DDX52 yes no 0 0 0 7 0 1 66.285 66.31 3 0.0013415 20622 20230619_1887_Aki_TMTPro18x_K_F7 80.871 64.338 11978 11633 8957.8 12649 13604 17094 14434 14508 19887 12158 13756 21333 16952 11370 11471 18189 14113 20140 11065 10654 9448.2 12744 13819 16885 14661 14941 19683 12701 14586 20885 16924 12425 11946 18254 13519 19086 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3209900 27002 4710 25359 50762 40928 40928 1 9606 Homo sapiens 0.1449312258446298 TLAFTSVDLTNK Unmodified 1308.6925 0.6925316 4564 Q9NPJ3-2;Q9NPJ3 ACOT13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes no 0 0 0 3.67 3.09 1 1 1 59.514 59.532 3 2.1504E-05 18424 20230619_1881_Aki_TMTPro18x_K_F2 122.55 91.675 93241 75466 92813 111060 93955 106130 101940 105090 119270 104000 111020 99292 113010 93444 110570 113180 108010 124610 86208 69375 94447 109110 97752 107620 102880 107430 120160 105050 114320 100890 115140 97673 112360 114050 103480 118180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166980000 27003 4564 25360 50763;50764;50765 40929;40930 40929 2 9606 Homo sapiens 0.05053303186559788 TLAGDVHIVR Unmodified 1079.6087 0.60874239 1430 Q5JPE4;A0A384MR19;F8VXU5;Q9UBQ0;Q9UBQ0-2 DKFZp667O202;VPS29 Vacuolar protein sorting-associated protein 29 yes no 0 0 0 7 0.816 1 1 1 41.123 41.176 3 3.2898E-08 9989 20230619_1886_Aki_TMTPro18x_K_F6 192.64 173.28 264580 204220 235970 221880 250140 298140 251410 260460 291900 282320 303780 307790 316620 273860 274470 339320 336410 346940 244350 187190 242220 223740 259040 294830 254770 269190 295590 284980 311680 310250 320830 287060 283620 340170 321350 329400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 574280000 27004 1430 25361 50766;50767;50768 40931;40932 40931 2 9606 Homo sapiens 0.07212236600184951 TLAMDTILANAR Unmodified 1288.6809 0.68092105 2030 A8K3S1;P46926;D6RAY7;P46926-2;D6R9P4;D6RFF8;B3KMV2 GNPDA1 Glucosamine-6-phosphate isomerase;Glucosamine-6-phosphate isomerase 1 yes no 0 0 0 1.5 0.5 1 1 59.075 59.082 3 3.2077E-13 18249 20230619_1881_Aki_TMTPro18x_K_F2 202.31 183.97 29451 24240 28739 27377 28083 30624 26003 30504 28954 33152 32105 31729 34066 28912 34932 35981 35270 39231 27228 22220 29229 27448 29168 30726 26462 31225 29489 33307 32883 32186 34745 30301 35532 36221 33770 37213 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107340000 27005 2030 25362 50769;50770 40933;40934 40934 2 9606 Homo sapiens 0.04812782891599454 TLAPTWEELSK Unmodified 1273.6554 0.65541781 4089 Q86UY0;Q6EHZ3;Q658S9;Q8NBS9;A0A024QZV0;Q8NBS9-2 TXNDC5;STRF8;DKFZp666I134;hCG_1811539 Thioredoxin domain-containing protein 5 yes no 0 0 0 7 0 1 58.721 58.771 3 2.8018E-06 17285 20230619_1887_Aki_TMTPro18x_K_F7 147.62 100.34 97347 78286 84777 87640 78008 88449 96969 100200 114050 115170 114850 120710 128180 117580 112160 130440 130790 140260 89908 71763 87087 87801 82139 89668 97220 101940 115280 115760 118420 122180 129710 122050 115460 131370 125020 133080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284030000 27006 4089 25363 50771 40935 40935 1 9606 Homo sapiens 0.029536316407984486 TLAPTWEELSKK Unmodified 1401.7504 0.75038083 4089 Q86UY0;Q6EHZ3;Q658S9;Q8NBS9;A0A024QZV0;Q8NBS9-2 TXNDC5;STRF8;DKFZp666I134;hCG_1811539 Thioredoxin domain-containing protein 5 yes no 0 0 1 1 0 1 54.929 54.929 3 0.011067 16440 20230619_1880_Aki_TMTPro18x_K_F1 67.456 45.258 49540 58101 66494 61434 64966 47570 67206 62794 44459 68065 68414 44375 52135 27528 83352 41860 33783 31428 46062 53169 66053 61653 67352 49607 66982 63254 47628 67686 68268 45590 55014 29794 81246 41390 32787 29969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104030000 27007 4089 25364 50772 40936 40936 1 9606 Homo sapiens 0.06557565111961594 TLAQAMLNNAQPDQYEAPDK Unmodified 2217.0372 0.037196727 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;Q92973-3;A0A7P0T944;A0A7P0T9C0 TNPO1 Transportin-1 yes no 0 0 0 6 0 1 58.751 58.816 3 0.060167 17637 20230619_1886_Aki_TMTPro18x_K_F6 39.659 24.237 115310 87151 100380 102550 80855 89610 91187 97644 104140 128200 134540 132840 145220 126740 130130 180130 152870 182170 106460 79947 102910 102170 85866 91812 91844 100020 106680 128020 137060 134550 147200 133760 134140 180090 146250 172890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70698000 27008 629 25365 50773 40937 40937 1 9606 Homo sapiens -0.02264038309431271 TLARPGPEPAPATDERDR Unmodified 1947.9763 0.97625145 3921 Q15149 PLEC Plectin yes yes 0 0 2 3 0 1 33.116 33.187 4 1.3536E-20 6841 20230619_1882_Aki_TMTPro18x_K_F3 194.19 176.05 16111 10911 13837 18244 25046 27064 29396 30332 31663 25277 20674 22479 28231 17169 18721 31532 26436 22687 14864 10054 14452 17924 25241 26755 29427 30603 31690 25732 22064 22783 28089 18664 19699 30920 25193 21656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17748000 27009 3921 25366 50774 40938 40938 1 9606 Homo sapiens 0.04018237493232846 TLASAGGPDNLVLLNPEK Unmodified 1807.968 0.96797818 1741 P35611-3;E7EV99;P35611;P35611-4;P35611-6;P35611-2;A0A804HL01;E7ENY0;H0Y9H2;Q4TT76;P35611-5;Q96D30;B4DPW4 ADD1;LA04NC01-25A3.2-001 Alpha-adducin yes no 0 0 0 7 0 1 61.145 61.184 3 8.6664E-07 18327 20230619_1887_Aki_TMTPro18x_K_F7 112.3 96.912 82814 88682 84173 83778 68469 98835 86464 84571 99838 90670 101500 113550 118500 112260 84603 150550 137170 166510 76734 81100 85183 85271 73038 98474 86578 87568 100990 92054 104850 114280 118940 117830 89905 151330 130940 157880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 348220000 27010 1741 25367 50775 40939 40939 1 9606 Homo sapiens 0.09631290523930147 TLATDILMGVLK Unmodified 1273.7316 0.73155964 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 3.5 0.5 1 1 65.563 65.586 3 0.00019024 20785 20230619_1882_Aki_TMTPro18x_K_F3 99.215 49.906 45787 37839 39920 38456 42486 49324 41482 46929 47241 30067 33918 31476 31741 28997 39711 32762 29837 32781 42296 34653 41068 38958 43943 49002 42079 47635 47215 31360 35337 31837 32851 30182 39659 32890 28664 31125 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58287000 27011 3246 25368 50776;50777 40940;40941 40940 2 9606 Homo sapiens 0.10564312216570215 TLATLSENNMEAK Unmodified 1420.6868 0.68679429 4505 Q9H2W6 MRPL46 39S ribosomal protein L46, mitochondrial yes yes 0 0 0 4.5 0.5 1 1 51.243 51.295 3 5.5242E-06 14310 20230619_1885_Aki_TMTPro18x_K_F5 123.99 112.01 42170 38713 42943 47360 47979 52878 50994 47862 58115 53197 59508 57396 59342 48722 54925 62618 60087 61427 39029 35501 43664 47186 49519 52941 51457 49399 58840 53618 60968 57808 60350 51283 56258 62614 57451 58352 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68885000 27012 4505 25369 50778;50779 40942 40942 1 9606 Homo sapiens -0.006721633874349209 TLATWATK Unmodified 890.48617 0.48616764 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9;J3KS06 KPNB1 Importin subunit beta-1 yes no 0 0 0 2.5 0.5 1 1 52.113 52.165 2 0.00015817 15114 20230619_1882_Aki_TMTPro18x_K_F3 190.52 121.13 1240400 1135600 1134600 1130200 1137000 1432900 1358000 1251000 1455700 822200 807350 531810 695500 552360 1088800 729840 838180 565640 1147100 1039500 1161700 1146500 1188300 1421800 1358800 1279200 1449400 846480 853080 555180 731930 578720 1084300 722620 802500 539980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 696170000 27013 3904 25370 50780;50781 40943 40943 1 9606 Homo sapiens 0.03654399868742075 TLAVITK Unmodified 744.47454 0.47454032 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;H0YI79;A0A994J6A0;A0A994J3G1;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 0 2 0 1 49.832 49.891 2 0.017133 14394 20230619_1881_Aki_TMTPro18x_K_F2 109.01 4.5647 402280 320340 371360 457450 472560 505790 497920 464840 589800 447330 499470 487470 488900 431490 459090 535880 558650 534670 371680 294400 381890 451050 483560 506740 503150 477410 591570 454590 516170 491420 498170 452360 473270 536550 533390 507940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255080000 27014 3212;3213 25371 50782 40944 40944 1 9606 Homo sapiens 0.09208202845411506 TLAVSGLGVVGR Unmodified 1127.6663 0.66625727 3433 P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 3.5 0.5 1 1 53.185 53.224 2 1.1479E-12 15455 20230619_1883_Aki_TMTPro18x_K_F4 218.93 204.27 131270 126500 131110 131640 100990 144370 118580 118210 143890 150820 153490 135150 167230 130790 137090 161910 129890 137010 121510 115810 132780 132740 108060 144410 119410 123450 145590 150240 157470 137840 168690 136740 139680 160750 124390 130370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 240180000 27015 3433 25372 50783;50784 40945 40945 1 9606 Homo sapiens 0.10753078805760197 TLAYLLPAIVHINHQPYLER Unmodified 2360.3005 0.30048612 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 5 0 1 61.992 62.041 4 0.048406 18837 20230619_1885_Aki_TMTPro18x_K_F5 45.047 32.28 45854 31385 46622 42858 44424 52283 42038 50879 61669 48897 45089 48604 51467 43410 50631 47506 57511 54214 42362 28847 47236 42469 46317 52100 43162 51987 61041 49540 47349 49160 52299 45183 51858 48062 54937 51434 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 590200000 27016 1328 25373 50785 40946 40946 1 9606 Homo sapiens 0.1747478992838296 TLDAEVVEK Unmodified 1002.5233 0.523341 991 B3KTK5;Q53GS8;H0Y3X6;B3KM78;A0A0C4DFX9;Q9H3P2;B3KSP0;H7C2C7;Q9H3P2-7 NELFA;WHSC2 Negative elongation factor A yes no 0 0 0 3 0 1 48.487 48.566 2 0.0090463 13522 20230619_1882_Aki_TMTPro18x_K_F3 100.57 48.573 40984 32276 38306 44735 38480 47003 41788 37899 54559 49465 56198 72362 67402 63730 44640 71139 90124 87336 37867 29654 39181 44157 40108 47132 42334 39695 54914 50096 58150 72094 67453 66394 48444 72189 85771 82791 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36144000 27017 991 25374 50786 40947 40947 1 9606 Homo sapiens 0.02218026623870628 TLDEILQEK Unmodified 1087.5761 0.57610486 1016 A0A0D9SEN2;P21127-3;A0A0D9SER5;A0A0D9SEI3;B4E3D9;P21127-2;P21127-8;P21127;Q9UQ88-3;Q9UQ88-4;Q9UQ88-2;Q5QPR3;Q9UQ88;B4E0M9;B4E0N4;E7ESP2;J3KS35;Q6PK02;Q05C84;A0A024R0C4;A0A1B0GYL8;E9PFJ2;A0A024R065;Q5QPQ9;Q3SWV2;A0A1B0H6K7;A0A087WYI9;B4DWE4;A0A087X1I0 CDK11B;CDK11A;CDC2L1;CDC2L2 Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A yes no 0 0 0 3.5 0.5 1 1 59.91 59.926 3 0.00094284 18310 20230619_1883_Aki_TMTPro18x_K_F4 98.033 67.779 74253 64454 73266 82431 74882 97235 88981 87620 106610 101820 102720 102360 107360 99713 90769 112980 113050 124260 68678 59144 74616 81942 78167 96935 89437 90553 107460 102200 105760 103810 108710 103630 93948 113880 108030 117870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 292720000 27018 1016 25375 50787;50788 40948;40949 40949 2 9606 Homo sapiens 0.03581984686684336 TLDELGIHLTK Unmodified 1238.6871 0.68705229 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 7 0 1 56.803 56.859 3 0.0024583 16537 20230619_1887_Aki_TMTPro18x_K_F7 76.655 48.487 102580 93625 81590 96500 62723 105770 111460 93194 115130 116750 81436 109630 130510 93690 89039 161970 138940 219930 94758 85723 84504 97362 68272 105910 109590 96762 115840 116530 87462 111070 129640 100990 94456 164600 133010 207980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1111900000 27019 2436 25376 50789 40950 40950 1 9606 Homo sapiens 0.07725624394743136 TLDFDALSVGQR Unmodified 1320.6674 0.66737948 1217 Q6DEN2;A0A140VK07;Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 5.5 0.5 1 1 58.272 58.334 2 2.2154E-17 17413 20230619_1886_Aki_TMTPro18x_K_F6 256.24 235.54 229250 179560 189720 228840 189170 209320 191590 194690 204610 283340 235020 227260 305190 212550 224810 323570 251350 256120 211630 164820 196200 226740 196720 212850 193550 202300 209460 279760 242660 232840 305100 225780 232030 319290 240270 243960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184050000 27020 1217 25377 50790;50791 40951 40951 1 9606 Homo sapiens 0.019872483839890265 TLDGELDEK Unmodified 1018.4819 0.48187012 3015 G3XAI2;P07942;A0A7I2V4J9;Q8TAS6 LAMB1 Laminin subunit beta-1 yes no 0 0 0 1 0 1 47.677 47.677 2 6.1331E-05 13406 20230619_1880_Aki_TMTPro18x_K_F1 161.92 76.851 57572 44611 50533 50346 70076 79955 71805 69745 98897 80557 75590 79234 102520 64814 70886 125290 101280 93755 53164 40903 52226 50771 71372 78367 73082 72207 98285 80844 79816 80106 102180 70584 74615 122980 96562 89411 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42327000 27021 3015 25378 50792 40952 40952 1 9606 Homo sapiens -0.02663154135473178 TLDGHMVVR Oxidation (M) 1042.523 0.52296385 806;3082 P13591-1;A0A087WTF6;P13591-3;P13591-4;A0A087WTE4;A0A087WVD0;H7BYX6 NCAM1 Neural cell adhesion molecule 1 no no 0 1 0 4.5 0.5 1 1 32.802 32.872 3 0.011076 6720 20230619_1885_Aki_TMTPro18x_K_F5 67.081 39.966 28320 21452 29059 37287 34123 37956 31967 34261 41309 29796 35220 38975 28795 28189 32236 32558 38097 37755 26180 19768 29582 36323 35001 38220 32650 35149 41267 30648 36171 38774 29792 29647 33044 32939 36392 35806 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30388000 27022 806;3082 25379 50793;50794 40953 40953 479 1 9606 Homo sapiens 0.003403284230216741 TLDLLTMK Unmodified 933.5205 0.52050423 2109 E7EW69;A8K7M3;E7EX04;B5ME97;Q9P0V9;Q9P0V9-2;Q9P0V9-3;Q9NSH2;Q59H84;B7Z371 SEPT10;DKFZp547B243 Septin-10 yes no 0 0 0 1 0 1 61.366 61.366 3 0.047014 19018 20230619_1880_Aki_TMTPro18x_K_F1 54.712 29.138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27023 2109 25380 50795 40954 40954 1 9606 Homo sapiens 0.0510847996533812 TLDLPIYVTR Unmodified 1189.6707 0.67067394 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 1 0 1 59.909 59.909 3 8.2593E-05 18448 20230619_1880_Aki_TMTPro18x_K_F1 115.57 83.356 18623 18181 21062 20008 20300 25906 20994 22046 25080 28196 23212 26854 27587 22930 22469 29390 25672 27907 17259 16652 21178 20141 21191 25658 21263 22944 25278 28123 24116 27172 27773 24126 23154 29328 24547 26514 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67130000 27024 3647 25381 50796 40955 40955 1 9606 Homo sapiens 0.08342543228627619 TLDLTGAVGHHGDNLVEK Unmodified 1874.9486 0.94863972 4275 Q8WU76-2;Q8WU76 SCFD2 Sec1 family domain-containing protein 2 yes no 0 0 0 6 0 1 48.55 48.629 4 1.1366E-09 13317 20230619_1886_Aki_TMTPro18x_K_F6 138.08 111.61 45456 46151 45447 49079 48674 46055 42826 48917 60513 49063 42959 48344 43561 38347 47541 47586 42844 43589 42095 42253 46218 49310 50119 46911 44085 49773 59945 49567 44975 48744 44641 40362 48015 47454 41043 41441 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207040000 27025 4275 25382 50797 40956 40956 1 9606 Homo sapiens 0.04616334233037378 TLDMIKK Unmodified 847.48372 0.48372479 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;Q58FF3 HSP90B1;HEL-S-125m;TRA1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 0 0 1 2 0 1 47.803 47.873 3 0.069763 13455 20230619_1881_Aki_TMTPro18x_K_F2 47.574 22.652 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27026 3452 25383 50798 40957 40957 1 9606 Homo sapiens 0.05388228139452167 TLDNVAIVEEEK Unmodified 1358.6929 0.69292553 4481 Q9C0C9;K7ES11 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 0 0 0 2 0 1 54.441 54.465 3 0.0021714 16381 20230619_1881_Aki_TMTPro18x_K_F2 75.669 58.343 50292 41270 48682 49485 45503 53321 54483 52178 66677 57223 58658 66374 66998 56455 56706 77568 73818 81235 46492 37854 49550 49361 47799 53599 54786 53532 66896 57859 60972 66642 67648 59681 58906 77742 70515 77091 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95438000 27027 4481 25384 50799 40958 40958 1 9606 Homo sapiens 0.02792678115747549 TLDPDPAIR Unmodified 996.52401 0.52400971 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;P55060-2 CSE1L Exportin-2 yes no 0 0 0 2.5 0.5 1 1 43.924 44 2 0.0088409 11389 20230619_1882_Aki_TMTPro18x_K_F3 87.251 56.681 393770 341560 378030 407460 385020 502750 466960 435080 485140 547550 553030 519960 585350 477680 463320 607720 622520 593210 364120 313200 385770 407300 402140 499440 466620 452160 496220 546480 565290 527860 590570 501140 482850 607360 593880 563690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 686040000 27028 1462 25385 50800;50801 40959 40959 1 9606 Homo sapiens 0.02560866063561207 TLDQSPELR Unmodified 1057.5404 0.54038805 1858 A0A8V8TRG9;P42345;A0A8V8TQM6;A0A8V8TQ52;B4E2H2;B4DZD5 MTOR Serine/threonine-protein kinase mTOR yes no 0 0 0 3 0 1 40.902 40.961 2 0.00012862 10002 20230619_1882_Aki_TMTPro18x_K_F3 124.92 90.833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27029 1858 25386 50802 40960 40960 1 9606 Homo sapiens 0.01391947229649304 TLDSVAK Unmodified 732.40177 0.4017693 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;Q8N519;A0A6Q8PF80;A0A6Q8PGH0;A0A6Q8PF59;A0A6Q8PFM1 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 5.5 0.5 1 1 42.879 42.968 2 0.0043317 10743 20230619_1885_Aki_TMTPro18x_K_F5 148.98 56.665 146350 90075 162780 186260 342090 354430 266410 325020 316160 130390 220100 277370 185410 200280 248360 69307 237610 219680 135250 83305 166850 182160 338930 344710 274450 328570 314760 146920 229350 271970 193630 202120 249820 80811 227330 207120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 470270000 27030 1428 25387 50803;50804 40961 40961 1 9606 Homo sapiens 0.024864490520030813 TLDSWRDEFLIQASPR Unmodified 1932.9694 0.96937516 1257 A0A158RFU6;P51149;A0A6Q8PG52;A0A6Q8PH84;A0A6Q8PGE6;B4DPH9;C9J592;C9IZZ0 RAB7A Ras-related protein Rab-7a yes no 0 0 1 8 0 1 60.914 60.946 3 1.6446E-33 18139 20230619_1888_Aki_TMTPro18x_K_F8 244.36 225.6 303090 254160 274820 292790 245800 270140 273390 261410 301300 359260 314390 319140 364130 333100 376040 407770 347970 376000 280090 233010 281160 292290 258430 274810 275030 270370 306320 356590 324280 326300 370740 347000 380810 406730 333400 357360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1993599999.9999998 27031 1257 25388 50805 40962 40962 1 9606 Homo sapiens 0.0402092461272332 TLEDPDLNVR Unmodified 1170.5881 0.58806652 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 1.5 0.5 1 1 46.987 47.025 2 2.6108E-09 13042 20230619_1881_Aki_TMTPro18x_K_F2 196.88 174.8 391870 313950 369160 380040 369830 453990 403800 423810 484710 510510 527660 540970 602110 494210 493100 589740 582750 633670 362130 288010 377020 379380 385530 452680 407830 437250 491170 512220 542610 546250 606890 516550 508820 593260 557060 601210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 551450000 27032 2126 25389 50806;50807 40963;40964;40965 40965 3 9606 Homo sapiens 0.009596014298494993 TLEDPDLNVRR Unmodified 1326.6892 0.68917755 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5;B3KMG3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 1 3 0 1 40.799 40.858 3 3.6535E-09 9963 20230619_1882_Aki_TMTPro18x_K_F3 164.39 140.64 83443 76379 83352 67429 89744 85281 78426 93796 87654 89782 100470 80027 104020 76740 98335 103950 103510 88131 77214 69848 84647 69190 92309 85173 80109 95037 89321 90630 102500 81703 105690 80749 100400 103130 98877 83931 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77392000 27033 2126 25390 50808 40966 40966 1 9606 Homo sapiens 0.0389005313254529 TLEEAVGNIVK Unmodified 1171.6449 0.64485312 4753 Q9Y678;B3KW21;Q8WUI6;H0Y8X7 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 6.33 0.471 2 1 58.98 59.037 2;3 7.7203E-07 17743 20230619_1886_Aki_TMTPro18x_K_F6 157.66 105.18 51322 48937 58708 56344 52513 64073 58239 59943 65936 73160 62574 59710 70524 62965 62004 73792 70129 72274 47561 44844 58922 56415 55222 64107 58655 61857 66674 72822 64689 61342 71349 65418 63714 73863 67035 68654 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 343680000 27034 4753 25391 50809;50810;50811 40967;40968 40967 2 9606 Homo sapiens 0.0658964898634622 TLEEDEEELFK Unmodified 1380.6297 0.62965657 1241 A0A140VK94;F6WQW2;P43487-2;P43487;C9JJ34;B7Z6U1;B4DE76;C9JDM3 RANBP1 Ran-specific GTPase-activating protein yes no 0 0 0 2 1 1 1 61.503 61.503 2 2.8730000000000003E-31 19061 20230619_1880_Aki_TMTPro18x_K_F1 289.46 247.59 1062700 877250 923030 946640 742040 916310 874650 873510 979510 1264000 1236800 1262200 1294700 1105000 461290 1624300 649230 1360200 981590 803810 946660 950380 789890 928160 878150 905930 1003500 1255900 1258000 1276600 1279700 1172000 501010 1605500 624290 1292100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 608400000 27035 1241 25392 50812;50813 40969;40970 40969 2 9606 Homo sapiens -0.045433073921458345 TLEEEDQSIVRPLETENHK Unmodified 2266.1077 0.10771913 2830 D3DVC4;P48681 NES Nestin yes no 0 0 1 2.5 0.5 1 1 48.011 48.086 4 6.1167E-49 13555 20230619_1881_Aki_TMTPro18x_K_F2 275.68 251.4 203880 164450 191150 177560 192880 239930 296880 277640 335520 379290 264200 273890 393660 265350 267070 395770 308730 321490 188400 150700 195320 179230 203220 238720 294290 283540 337280 374590 280070 282500 391230 281220 276810 391050 295070 306090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1282300000 27036 2830 25393 50814;50815 40971 40971 1 9606 Homo sapiens 0.025309582798854535 TLEEILLER Unmodified 1114.6234 0.6233894 2527 B4DLG2;O75152;Q0D2N5;E9PBY7;E9PQ61 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 0 0 0 3.5 0.5 1 1 62.003 62.02 2 0.0031004 19254 20230619_1882_Aki_TMTPro18x_K_F3 100.25 33.894 65330 66181 82488 81171 55285 83521 81137 75207 72603 73736 85515 68952 81419 63671 66331 95794 85077 95920 60630 60672 81983 80783 60361 84033 80093 77403 74929 74452 86829 70168 82483 67590 68921 95649 81295 91065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228560000 27037 2527 25394 50816;50817 40972 40972 1 9606 Homo sapiens 0.0706626395767671 TLEELDPESR Unmodified 1187.567 0.56699673 4117 Q6P161 MRPL54 39S ribosomal protein L54, mitochondrial yes yes 0 0 0 1 0 1 48.578 48.578 2 0.00027719 13775 20230619_1880_Aki_TMTPro18x_K_F1 157.59 124.75 204630 179600 195800 214260 223300 256050 234790 232260 292030 292940 268100 250000 299390 242930 243530 294010 291270 286630 189240 164680 200180 214070 230250 255200 237810 240480 293470 291560 277380 255540 301880 253630 251530 294080 278200 272330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142590000 27038 4117 25395 50818 40973;40974 40974 2 9606 Homo sapiens -0.019284086696870872 TLEEQGVAHNVK Unmodified 1323.6783 0.67827852 908 A0A090N8Q5;H3BM14;H3BM74;Q9Y5A7-2;Q9Y5A7;C9JRT6;F8WDB6 NYREN18;NUB1 NEDD8 ultimate buster 1 yes no 0 0 0 3.5 0.5 1 1 38.906 38.954 3 4.9013E-24 9104 20230619_1883_Aki_TMTPro18x_K_F4 233.46 189.28 194340 139590 166860 178970 207280 228260 198010 180500 241970 220240 260140 246490 270510 231390 220280 281080 309000 281620 179360 128190 172470 178100 211990 225980 201510 188810 244680 221390 266350 248690 273470 241790 230100 281510 294600 267580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100170000 27039 908 25396 50819;50820 40975;40976 40976 2 9606 Homo sapiens 0.02938650758278527 TLEFNRR Unmodified 934.49846 0.49846366 4347 Q99575;Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 1 3.67 3.09 1 1 1 34.987 35.003 3 0.0081815 7982 20230619_1880_Aki_TMTPro18x_K_F1 98.503 44.447 144100 123860 144330 134290 173300 163980 141090 147400 158410 110100 121560 122580 108700 98322 137460 97234 136390 106270 133290 113480 146910 135230 176650 163300 144710 150720 158820 113720 125980 123040 112770 102140 138980 98387 130300 100950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 89758000 27040 4347 25397 50821;50822;50823 40977;40978 40977 2 9606 Homo sapiens 0.0285943633180068 TLEGELHDLR Unmodified 1181.6041 0.60405094 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;Q3BDU5;A0A6Q8PHQ9;P02545-4;P02545-5;Q8N519;Q5TCI8;A0A6Q8PF80;A0A6Q8PGH0 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 2 0.816 1 1 1 45.46 45.539 3 5.0084E-24 12550 20230619_1880_Aki_TMTPro18x_K_F1 223.31 172.96 564930 466180 431650 631810 706990 754250 847940 791060 777160 628950 587480 564480 610400 499570 758780 569120 437720 483740 521380 428120 455180 625670 716030 754060 843780 801250 787890 642460 613110 573870 628830 521160 750230 566760 422230 460190 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2621700000 27041 1428 25398 50824;50825;50826 40979;40980;40981;40982 40979 4 9606 Homo sapiens 0.02051307666761204 TLENQSHETLER Unmodified 1455.6954 0.69538514 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 1.5 0.5 1 1 33.461 33.49 3 4.0922E-24 7082 20230619_1881_Aki_TMTPro18x_K_F2 247.69 214.63 29715 17790 27840 32536 33616 44015 37736 44769 38602 52344 46081 59300 53691 41525 38984 57853 60414 62136 27416 16423 28566 31768 34622 43605 37854 45848 39657 52655 47336 59231 53849 44305 41187 58051 57609 58965 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105070000 27042 2830 25399 50827;50828 40983 40983 1 9606 Homo sapiens -0.014234734265755833 TLEPQELAR Unmodified 1055.5611 0.56112349 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;A0A024QZ91;A0A024QZC0 ATXN2L Ataxin-2-like protein yes no 0 0 0 3 0 1 43.935 44.004 2 0.0083522 11343 20230619_1882_Aki_TMTPro18x_K_F3 88.136 55.207 214400 165720 198430 210750 180550 219680 209450 204710 236280 219220 236540 256990 273270 214630 232040 274960 273450 269070 198060 152130 202730 209240 189950 221060 210390 210630 239180 221950 244410 257760 275690 226030 239190 274890 261200 255640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172880000 27043 4285 25400 50829 40984 40984 1 9606 Homo sapiens 0.035565376093245504 TLEPVRPPVVPNDYVPSPTR Unmodified 2232.1903 0.19026697 993 A0A0C4DG21;F8WAL6;Q9NYB9-2;Q9NYB9;E7EW77;Q9NYB9-4;A0A7D9NKC8;E7EP65;Q9NYB9-3;B7Z836;H0Y6B5;B7Z612;Q53SH3;H7C3Q7 ABI2;ABI-2 Abl interactor 2 yes no 0 0 1 1 0 1 52.996 52.996 3 7.1132E-16 15592 20230619_1880_Aki_TMTPro18x_K_F1 149.84 133.53 78225 68573 80266 72479 57951 77843 69373 64698 80533 94373 84387 98167 98848 85701 100020 119450 113840 127880 72381 62808 80990 72993 62385 78015 69678 67824 81663 93895 87154 99041 100520 90610 102560 119890 108890 121320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208190000 27044 993 25401 50830 40985 40985 1 9606 Homo sapiens 0.12345944869366576 TLEQQENFAEVAR Unmodified 1533.7423 0.74233534 1573 A0A5F9ZHM6;A0A5F9ZI15;A0A5F9ZHN0;A0A5F9ZH03;A0A5F9ZHE2;A0A5F9ZHR2;A0A5F9ZHL9;A0A5F9ZHJ4;A0A5F9ZI08;A0A5F9ZH39;A0A5F9ZI69;A0A5F9ZHJ6;A0A5F9ZHL3;A0A5F9ZGS5;A0A5F9ZHL5;A0A5F9ZH17;A0A5F9ZI18;A0A5F9ZI56;A0A5F9ZGY1;A0A5F9ZHG3;A0A5F9ZHQ5;A0A994J7V8;A0A5F9ZHC9;A0A5F9ZI81;A0A5F9ZH70;A0A5F9ZGZ1;A0A5F9ZHQ3;A0A5F9ZI36;A0A5F9ZHA1;A0A5F9ZH58;A0A5F9ZI73;A0A5F9ZHY6;A0A5F9ZGS7;A0A5F9ZH34;A0A5F9ZH10;A0A5F9ZH35;E9PCH6;A0A5F9ZI16;A0A5F9ZH99;A0A5F9ZH18;A0A5F9ZGX8;B7Z2H4;A0A5F9ZI53;A0A5F9ZH38;Q01484-5;Q01484-2;A0A5F9ZI45;A0A5F9ZI46;A0A5F9ZH30;B7Z636;A0A5F9ZGZ5;A0A5F9ZI65;A0A5F9ZHT8;A0A5F9ZGY3;A0A5F9ZH19;A0A5F9ZHN5;A0A5F9ZI40;A0A5F9ZHT4;I6L894;A0A5F9ZHD2;A0A5F9ZI41;A0A5K1VW73;A0A5F9ZHF7;A0A5F9ZHE4;B7Z678;Q7Z344;H0Y931;A0A5F9ZHV4;E9PHW9;A0A5F9ZGY4;Q01484;H0Y8Y2;A0A5F9ZHS1;D6RHE1;A0A5F9ZGX3;H0Y933;A0A5F9ZI30;A0A5F9ZHR8;H0YAG3;Q01484-7 ANK2;DKFZp686M09125 Ankyrin-2 yes no 0 0 0 2 0 1 47.831 47.902 2 9.1805E-06 13469 20230619_1881_Aki_TMTPro18x_K_F2 131.69 119.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27045 1573 25402 50831 40986 40986 1 9606 Homo sapiens -0.003186138754244894 TLEQQENFEEVAR Unmodified 1591.7478 0.74781464 3033 Q59G01;H0Y9E9;Q12955-7;Q12955-5;Q12955-4;Q12955;Q8NAK2;A0A087WZ65;A8KA62;Q6ZT73;A0A087WTF3;Q12955-6 ANK3 Ankyrin-3 yes no 0 0 0 1 0 1 47.258 47.258 2 3.2934E-15 13243 20230619_1880_Aki_TMTPro18x_K_F1 206.58 187.34 13046 15269 14596 9781.7 13509 16415 20364 21024 24396 23152 17848 17369 23914 16409 16252 25013 17900 19731 12108 13926 14662 10456 14311 16215 20251 21191 24375 23106 18875 17871 23826 17430 16801 24674 17123 18790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17889000 27046 3033 25403 50832 40987 40987 1 9606 Homo sapiens -0.02438935083614524 TLESSIQGLR Unmodified 1102.5982 0.59823728 4304 V9HVZ6;Q92747;Q53GB6;A0A0K0K1L3 HEL-68;ARPC1A Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 6.5 0.5 1 1 49.104 49.185 2 1.5263E-09 13190 20230619_1887_Aki_TMTPro18x_K_F7 205.91 131.43 389400 322820 356860 465130 525600 568690 470910 482830 516260 407420 458560 407660 436790 379440 386930 481980 492800 463160 359850 296660 368420 458990 531130 565070 479290 497150 520820 416070 471870 413350 444310 397710 400690 481360 470280 440220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1298000000 27047 4304 25404 50833;50834 40988;40989 40989 2 9606 Homo sapiens 0.05104209155092576 TLESTWEKPQELK Unmodified 1587.8144 0.81443765 1699 A0A7P0T8N8;O14776-2;O14776;G3V220;B7Z921 TCERG1 Transcription elongation regulator 1 yes no 0 0 1 6.33 0.471 2 1 52.397 52.473 3;4 2.6506E-15 14973 20230619_1886_Aki_TMTPro18x_K_F6 172.09 149.29 176190 162360 190000 208290 152740 222450 197500 190920 200820 227810 224990 225460 225260 177420 237940 178620 193410 167130 163150 148950 191490 206710 163160 223000 196730 198270 205470 228120 229790 227180 230300 184710 238930 179090 185300 158960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 202190000 27048 1699 25405 50835;50836;50837 40990;40991 40990 2 9606 Homo sapiens 0.04404300478267942 TLESVDPLGGLNTIDILTAIR Unmodified 2210.2158 0.21581302 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;O00429-7;H0YI79;A0A994J6A0;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 0 8 0 1 66.518 66.537 3 5.1546E-05 20609 20230619_1888_Aki_TMTPro18x_K_F8 83.251 57.661 9306.5 8712.5 8454.5 9682.4 9745.9 8676.2 11775 10291 9755.4 9155.1 9898.5 11720 11423 9924.5 11370 9501 10820 12394 8606.7 7981.8 8685.6 9689.5 10052 8895.5 11688 10379 10058 9388.4 10234 11713 11607 10276 11522 9723.4 10368 11735 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45862000 27049 3212;3213 25406 50838 40992 40992 1 9606 Homo sapiens 0.1591137460113714 TLETANCMSSQTK Unmodified 1469.649 0.64902858 337 A0A024R5F4;P50416;B2RAQ8;P50416-2;H3BP22;H3BUV7 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 0 6.5 0.5 1 1 43.333 43.42 3 9.6861E-08 10661 20230619_1887_Aki_TMTPro18x_K_F7 145.81 133.04 29272 27630 27975 30968 40297 40276 35927 43531 48643 36093 33698 33793 37593 29983 34349 43145 41808 38976 27083 25314 28726 31133 40756 40108 36869 44007 48223 36821 35447 34307 38094 31756 35444 42883 39909 37074 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101800000 27050 337 25407 50839;50840 40993 40993 1 9606 Homo sapiens -0.06700997644566087 TLETLIR Unmodified 844.50182 0.5018177 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46;Q7Z6P5 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 7.5 0.5 1 1 50.993 51.07 2 0.010474 14030 20230619_1887_Aki_TMTPro18x_K_F7 117.93 45.913 243490 192080 201940 215020 208250 235070 237910 229010 261950 277930 280220 258440 305190 243390 237820 306730 289420 286670 224780 176090 208780 215600 216760 236100 238910 235680 266360 277670 287520 262870 307390 254990 246240 305900 276400 272500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1464999999.9999998 27051 1104 25408 50841;50842 40994 40994 1 9606 Homo sapiens 0.07334686385809164 TLETVPLER Unmodified 1056.5815 0.58152458 3491 P22626;A0A7I2V4I6;A0A384NL58;A0A087WUI2 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 3.5 0.5 1 1 46.884 46.944 2 0.00010926 12706 20230619_1882_Aki_TMTPro18x_K_F3 154.12 107.32 782030 643280 710220 838800 814010 891680 881220 882820 911050 924920 926810 900860 1067000 841250 892030 1068900 983570 968740 722600 590520 729820 831520 839090 897390 885580 903640 927520 931710 956090 914040 1075800 881980 916180 1064400 940080 921230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2340800000 27052 3491 25409 50843;50844 40995;40996 40995 2 9606 Homo sapiens 0.0554970826913177 TLEWRPR Unmodified 956.5192 0.5191991 499 Q5T9B9;A8K2X4;A0A024R878;P17813-2;P17813;Q96CG0;F5GX88;B7Z6Y5 ENG Endoglin yes no 0 0 1 2 0 1 40.007 40.077 3 0.011036 9796 20230619_1881_Aki_TMTPro18x_K_F2 101.69 64.99 140230 95236 151140 153960 212390 262530 297810 312150 444250 175040 234680 298200 192830 204880 321050 169170 269250 287840 129620 87716 153740 152070 218460 258080 299440 311600 434770 188400 249460 293750 204580 212420 320510 177720 258250 272060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192260000 27053 499 25410 50845 40997 40997 1 9606 Homo sapiens 0.03920026711466562 TLFETIER Unmodified 1007.5288 0.52876073 4518 Q9H5Q4;A0A024R5R8 TFB2M Dimethyladenosine transferase 2, mitochondrial yes no 0 0 0 4 0 1 53.525 53.544 2 0.019409 15600 20230619_1883_Aki_TMTPro18x_K_F4 89.542 51.22 144110 122370 157270 162810 135800 159370 150400 143650 166780 171620 153780 134790 164030 126980 168550 176370 158840 160410 133390 112340 158380 161030 143190 161030 151370 148630 168560 170840 158750 138320 167210 133930 170820 175530 152080 152520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217770000 27054 4518 25411 50846 40998 40998 1 9606 Homo sapiens 0.025297502063381216 TLFGFLGK Unmodified 881.50109 0.50108942 3797 Q5T760;Q05519-2;Q05519;Q05BU6;Q6PJY9;Q6PKC9;Q6PJB9;B4DWT1;B4DTC1;S4R3C4 SRSF11;SFRS11 Serine/arginine-rich splicing factor 11 yes no 0 0 0 5.67 0.471 1 2 63.339 63.387 2;3 0.0088145 19638 20230619_1886_Aki_TMTPro18x_K_F6 113.89 62.317 496780 468500 501410 552880 533640 612170 563880 579990 611840 607340 547930 567830 641700 550280 575010 701790 626340 682260 459830 429440 509790 552220 552710 613800 568370 595410 618450 611190 569490 577790 648890 576250 589440 701320 599170 648010 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 952760000 27055 3797 25412 50847;50848;50849 40999;41000;41001 41001 3 9606 Homo sapiens 0.055598917367547074 TLFLAVQVQNEEGK Unmodified 1574.8304 0.83042206 3356 O95433;O95433-2;G3V3W9 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 7 0 1 60.936 60.979 3 0.0020859 18221 20230619_1887_Aki_TMTPro18x_K_F7 72.209 57.333 31384 27162 32478 36514 30103 32236 35538 36573 40872 39042 40225 35286 45816 38634 43625 45761 43114 47135 29039 24938 32890 36049 31594 33020 35692 37132 41313 39217 41520 36142 46474 40131 44384 45942 41284 44739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8115500 27056 3356 25413 50850 41002 41002 1 9606 Homo sapiens 0.06600006715189011 TLFPGTDHIDQLK Unmodified 1483.7671 0.76709352 744 A0A024RD15;Q16539-5;Q16539-3;Q16539-4;Q16539;B4E0K5 MAPK14 Mitogen-activated protein kinase;Mitogen-activated protein kinase 14 yes no 0 0 0 7 0 1 54.341 54.404 3 5.5354E-06 15486 20230619_1887_Aki_TMTPro18x_K_F7 123.95 87.662 166540 135760 147750 159580 182080 215280 187640 186470 216940 226090 195890 176260 250410 169930 170090 262990 215110 204120 153840 124500 152270 159930 186750 212780 189740 193460 218730 224890 204140 181150 249770 180580 177370 259190 205300 194540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 233500000 27057 744 25414 50851 41003 41003 1 9606 Homo sapiens 0.0445606599794246 TLFPLIEAK Unmodified 1030.6063 0.60628277 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 1 0 1 62.661 62.661 2 2.2721E-06 19563 20230619_1880_Aki_TMTPro18x_K_F1 189.7 130.79 293690 253890 264910 294430 270490 320200 317250 315670 327660 336900 326700 323710 348630 294960 326190 386300 330340 368310 271440 232750 271810 294400 281960 321720 317510 323360 333310 338910 336230 328370 354040 310050 332670 385540 316290 349880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172570000 27058 3444 25415 50852 41004 41004 1 9606 Homo sapiens 0.09220388142512093 TLFQIQAER Unmodified 1104.5928 0.59275797 1244 A0A140VKC0;Q16222-2;Q16222-3;Q16222 UAP1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase yes no 0 0 0 8 0 1 51.401 51.478 2 0.0029063 14163 20230619_1888_Aki_TMTPro18x_K_F8 102.06 76.502 192650 128970 184640 190250 153020 181760 170630 175570 192220 194110 189170 165860 217770 168970 179050 211960 215270 195650 177880 118660 187770 186940 162060 184220 171810 180310 194570 194340 195310 169900 219430 176560 184920 211300 205480 186070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49997000 27059 1244 25416 50853 41005 41005 1 9606 Homo sapiens 0.04464530363270569 TLFSNIVLSGGSTLFK Unmodified 1682.9243 0.92432245 1483 A0A384NQ21;P61163;R4GMT0;B4DM97;B4DXP9;B4DMT4 ACTR1A Alpha-centractin yes no 0 0 0 6.5 0.5 1 1 65.048 65.084 3 1.059E-11 20123 20230619_1887_Aki_TMTPro18x_K_F7 165.93 145.84 118270 95872 93450 103950 97916 106060 111010 106260 125540 113420 128620 126620 129980 115570 114290 125300 129370 127460 109170 87856 97123 104380 101760 107140 111610 108770 127140 114680 131860 127590 131910 120060 117380 125860 123620 121040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 558020000 27060 1483 25417 50854;50855 41006;41007 41007 2 9606 Homo sapiens 0.11017725817418977 TLGDFAAEYAK Unmodified 1184.5714 0.57135383 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9;Q05D33;Q6PJL0 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 6.25 0.829 1 1 2 57.812 57.871 2;3 3.3963E-06 16935 20230619_1887_Aki_TMTPro18x_K_F7 162.36 123.21 613850 533510 575520 636230 606750 675430 630080 617740 654050 704480 686110 702790 812100 652230 746630 809420 752270 818030 567540 489210 588630 634600 628470 678800 634860 637510 666810 707240 708190 711930 821410 683020 761050 811170 720160 776630 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1145000000 27061 261 25418 50856;50857;50858;50859 41008;41009;41010;41011 41010 4 9606 Homo sapiens -0.013548994561233485 TLGECGFTSQTAR Unmodified 1426.6511 0.65107749 1399 A0A8I5KUS5;A0A384MDL3;Q15370;Q15370-2;B8ZZU8;I3L0M9 TCEB2 Transcription elongation factor B polypeptide 2 yes no 0 0 0 6 0.816 1 1 1 43.091 43.176 2 4.5905E-21 10837 20230619_1886_Aki_TMTPro18x_K_F6 233.13 208.34 118150 78652 110970 131960 95362 139640 127440 118030 166780 170320 175000 186910 191320 165840 145890 187900 190480 214080 109060 72484 113270 128860 101500 139970 127840 123530 168030 169880 179890 188210 192640 172960 151850 189800 181980 202970 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 187000000 27062 1399 25419 50860;50861;50862 41012;41013;41014 41013 3 9606 Homo sapiens -0.04518200844427156 TLGECGFTSQTARPQAPATVGLAFR Unmodified 2635.3177 0.3176691 1399 A0A8I5KUS5;A0A384MDL3;Q15370;Q15370-2;B8ZZU8;I3L0M9 TCEB2 Transcription elongation factor B polypeptide 2 yes no 0 0 1 4 0 2 54.298 54.313 3;4 3.4399E-75 15916 20230619_1883_Aki_TMTPro18x_K_F4 300.83 281.79 244200 212520 228850 222440 232350 282080 233060 266180 311280 248900 231510 215550 243150 218770 242180 272760 271620 256200 225770 194640 233780 224750 241480 280360 237460 272390 309420 251620 241710 220600 247910 228390 248070 272220 259490 243570 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2272700000 27063 1399 25420 50863;50864 41015;41016;41017 41015 3 9606 Homo sapiens 0.06542297681198761 TLGHVMPR Oxidation (M) 925.48037 0.48037075 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 1 0 4.5 3.5 1 1 29.796 29.806 3 0.0025258 5550 20230619_1888_Aki_TMTPro18x_K_F8 96.492 65.119 27217 25282 28710 26856 34530 35500 29779 31258 37795 30006 34836 29509 34677 25466 26434 28463 40765 30882 25200 23153 29110 27120 35267 35161 30557 32181 37912 30395 35823 29861 34993 26586 27821 28686 38797 29342 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 14906000 27064 2350 25421 50865;50866 41018;41019 41019 1459 2 9606 Homo sapiens 0.014649780854597338 TLGILGLGR Unmodified 898.56 0.56000128 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;A0A286YFA2;A0A286YFL2;Q9UMY2;A0A286YFM8;A0A286YF78;A0A286YFE1 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 5 0 1 57.961 58.017 2 0.0017181 17093 20230619_1885_Aki_TMTPro18x_K_F5 130.22 74.717 2016500 1882900 1941100 1816600 1791800 2391400 1590800 1716400 1990600 940960 1098700 1037900 697550 803170 2362600 924090 1143300 1027300 1865700 1722900 1975100 1848700 1871900 2359000 1629000 1779500 1966100 997850 1154500 1042100 804650 841740 2297900 937120 1104800 975060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1472299999.9999998 27065 1334 25422 50867 41020 41020 1 9606 Homo sapiens 0.10666368031104412 TLGLYGK Unmodified 750.42759 0.42759012 3419;2729 C7DJS2;V9HWE9;P09211;A8MX94;C7DJS1 GSTP1;HEL-S-22 Glutathione S-transferase P no no 0 0 0 2 0.816 1 1 1 49.817 49.861 2 0.0074767 14017 20230619_1882_Aki_TMTPro18x_K_F3 124.89 62.045 11298000 8842500 9664000 10398000 12359000 13784000 11970000 11582000 13946000 13781000 15880000 16765000 15020000 13505000 14450000 16262000 17438000 16630000 10432000 8110400 9998300 10417000 12621000 13632000 12153000 12043000 14172000 13902000 16171000 16772000 15337000 14178000 14879000 16314000 16650000 15794000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 9124500000 27066 2729;3419 25423 50868;50869;50870 41021;41022;41023 41023 3 9606 Homo sapiens 0.0423934329429585 TLGMAEEDEEE Unmodified 1251.4813 0.48127777 3854 Q13505-3;Q13505;Q13505-2 MTX1 Metaxin-1 yes no 0 0 0 1 0 1 49.49 49.49 2 0.00028147 14146 20230619_1880_Aki_TMTPro18x_K_F1 122.18 122.18 21195 22248 24612 27787 24583 32871 30552 32621 35535 34146 32477 33007 37371 34111 33648 38040 43831 41542 19659 20398 24749 27671 25735 32830 30614 33371 35804 34400 33686 33603 37839 35358 34865 38347 41823 39428 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47517000 27067 3854 25424 50871 41024 41024 1 9606 Homo sapiens -0.13440361637481146 TLGMAEEDEEE Oxidation (M) 1267.4762 0.47619239 3854 Q13505-3;Q13505;Q13505-2 MTX1 Metaxin-1 yes no 0 1 0 1 0 1 43.523 43.523 2 0.066788 11643 20230619_1880_Aki_TMTPro18x_K_F1 79.906 75.294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27068 3854 25424 50872 41025 41025 2532 1 9606 Homo sapiens -0.14684665500089977 TLGMAISERPDLR Unmodified 1457.766 0.76604767 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9;B3KY97 RRP12 RRP12-like protein yes no 0 0 1 7.5 0.5 1 1 47.855 47.928 3 2.3135E-05 12660 20230619_1888_Aki_TMTPro18x_K_F8 101.45 68.52 55887 52271 55555 58152 51337 66507 67897 69892 81546 59897 46522 46743 70326 59137 58057 69317 62468 60208 51721 47888 56437 58380 54193 66677 67898 70877 80883 60727 50429 48507 70454 61138 59554 68956 59710 57290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216840000 27069 2355 25425 50873;50874 41026 41026 1 9606 Homo sapiens 0.055475283573969136 TLGQAEALDK Unmodified 1044.5451 0.54513908 1452 F8VS11;A0A8I5KW96;A0A384N647;P27144 AK4 Adenylate kinase 4, mitochondrial yes no 0 0 0 4 0 1 47.083 47.125 2 0.0058637 12668 20230619_1883_Aki_TMTPro18x_K_F4 100.69 34.005 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27070 1452 25426 50875 41027 41027 1 9606 Homo sapiens 0.024648313724128457 TLGSSDTQQLR Unmodified 1204.6048 0.60477922 2060 A8K4Z6;Q9BRD0;H7C462 BUD13 BUD13 homolog yes no 0 0 0 4.5 0.5 1 1 37.929 37.996 2 1.5958E-12 8705 20230619_1883_Aki_TMTPro18x_K_F4 214.71 185.54 40599 31719 41752 38781 44766 51349 43823 44703 51543 47720 53617 50935 54897 46497 43655 52986 57438 51008 37539 29104 42345 38757 46256 50813 44495 46197 52148 48179 54936 51431 55462 48448 45398 53009 54779 48492 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56500000 27071 2060 25427 50876;50877 41028 41028 1 9606 Homo sapiens 0.010661023158036187 TLGTGSFGR Unmodified 894.45593 0.45593014 456;2295 A8K8B9;A0A024R7J0;A0A8V8TL59;P17612-2;P17612;K7ERP6;Q15136;P22694-4;B4E2L0;P22694-2;P22694-9;P22694-6;P22694-7;P22694-5;P22694;P22694-3;B2RB89;P22694-10;A0A087WVC4;B7ZA00;B1APG1;B1APF7;B1APF9;B1APF8;B1APG2;B1APG3;P22694-8;B1APG0 PRKACA;KIN27;PRKACB cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 0 0 0 1.5 0.5 1 1 41.774 41.813 2 0.0033396 10658 20230619_1881_Aki_TMTPro18x_K_F2 98.009 79.47 366380 284040 315710 317940 388310 405950 397390 368860 441240 347760 419050 458800 370160 332480 416340 390770 422690 445200 338280 260420 326020 319560 397800 403090 401400 378910 445750 356080 429250 456350 381670 350110 422770 394900 404520 422190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 399420000 27072 456;2295 25428 50878;50879 41029 41029 1 9606 Homo sapiens 0.00448041203583216 TLGTMIAGDTSGDYR Oxidation (M) 1572.709 0.7089863 2493 B4DT77;B4DWU2;B4DHY4;Q53HM8;P20073-2;P20073;B2R7L2;B2R657 ANXA7 Annexin;Annexin A7 yes no 0 1 0 4 0 1 46.201 46.245 2 0.055562 12268 20230619_1883_Aki_TMTPro18x_K_F4 65.842 57.955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27073 2493 25429 50880 41030 41030 1524 1 9606 Homo sapiens -0.054459837096601404 TLGTMIAGDTSGDYRR Oxidation (M) 1728.8101 0.81009732 2493 B4DT77;B4DWU2;B4DHY4;Q53HM8;P20073-2;P20073;B2R7L2;B2R657 ANXA7 Annexin;Annexin A7 yes no 0 1 1 6.5 0.5 1 1 40.954 41.035 3 1.1239E-09 9930 20230619_1886_Aki_TMTPro18x_K_F6 145.86 130.47 92062 73436 101110 91972 109160 106390 115050 108580 110980 100720 114560 109690 114300 97237 106970 102530 118470 116530 85183 67392 102010 91587 112730 106570 115550 110570 113410 102490 117340 110550 116310 101010 109510 103750 113230 110540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122900000 27074 2493 25430 50881;50882 41031 41031 1524 1 9606 Homo sapiens -0.025155320069643494 TLGTPTQPGSTPR Unmodified 1311.6783 0.67827852 2034 A8K3Z5;Q8NFH5-2;Q8NFH5;Q8NFH5-3 NUP35 Nucleoporin NUP53 yes no 0 0 0 7.5 0.5 1 1 37.783 37.808 2 2.619E-07 8580 20230619_1888_Aki_TMTPro18x_K_F8 195.4 164.98 74113 62499 71266 83820 95826 94597 94961 89656 102110 99060 104950 110200 117230 93128 93841 125420 121030 102960 68522 57385 73073 83007 97478 94743 95993 92204 103770 99951 108100 110820 118130 98315 97504 124170 115410 98101 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108860000 27075 2034 25431 50883;50884 41032;41033 41033 2 9606 Homo sapiens 0.034906507582718405 TLHCLMK Unmodified 901.45138 0.45137881 4310 Q92896;Q92896-3;Q92896-2;H3BM42 GLG1 Golgi apparatus protein 1 yes no 0 0 0 3 0 1 42.32 42.382 3 0.067479 10658 20230619_1882_Aki_TMTPro18x_K_F3 52.268 21.54 46160 34015 38265 46705 51127 68224 55853 54484 71003 47975 55453 52780 52354 48707 56173 48674 56194 55865 42596 31256 39796 46369 52351 66988 56472 56428 70767 49044 57484 53238 53747 50366 57011 49347 53764 52986 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28278000 27076 4310 25432 50885 41034 41034 1 9606 Homo sapiens -0.003288825351887681 TLHEVSLQESIR Unmodified 1410.7467 0.74669243 3802 Q05CW7 NAT10 yes yes 0 0 0 4.5 0.5 1 1 43.046 43.108 3 3.595E-16 10870 20230619_1883_Aki_TMTPro18x_K_F4 194.39 167.07 107070 99904 119000 110940 197690 200050 167400 153590 287450 138070 160430 171400 140710 131740 151340 154790 170710 174550 99179 91525 121030 112300 198360 194520 174020 159670 280480 141760 169770 171130 144920 138360 154790 156280 163170 165570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199410000 27077 3802 25433 50886;50887 41035;41036 41035 2 9606 Homo sapiens 0.057748953381405954 TLHGQETYTPR Unmodified 1301.6364 0.6364137 1531 D3DVA3;B4DF47;A0A3B3IUD2;A8K3J5;Q9BUK6-7;Q9BUK6-3;Q9BUK6-2;Q9BUK6;B4DHK3;Q9BUK6-4 MSTO1 Protein misato homolog 1 yes no 0 0 0 6 0 1 32.352 32.388 3 2.0082E-06 6658 20230619_1886_Aki_TMTPro18x_K_F6 130.56 102.88 12583 6466.9 13307 14656 14921 17369 15543 16004 18842 16563 17564 17370 19571 16458 16548 16004 22159 15602 11613 5996.3 13492 14146 15397 17307 15738 16457 18955 16741 18165 17564 19772 16982 17183 16074 21102 14847 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8015200 27078 1531 25434 50888 41037 41037 1 9606 Homo sapiens -0.00233904930269091 TLHLQTGNLLNWGR Unmodified 1621.8689 0.86887325 2822 D3DT44;P48507;P48507-2 GCLM Glutamate--cysteine ligase regulatory subunit yes no 0 0 0 6 0 1 56.645 56.717 3 1.6844E-22 16773 20230619_1886_Aki_TMTPro18x_K_F6 234.9 202.57 44224 37084 48629 56555 48987 50816 49145 51105 62885 59273 58366 53455 66886 47975 55312 58254 60456 62304 40933 34101 49078 55409 50842 51819 49984 52417 63122 59297 60424 54355 67384 50271 56748 58592 57807 59127 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85897000 27079 2822 25435 50889 41038 41038 1 9606 Homo sapiens 0.08281357140367618 TLHNLVIQYAAQGR Unmodified 1582.858 0.85797422 740 A0A024RCZ8;Q9NSK0;Q9NSK0-3;Q9NSK0-5;C9J8T5;Q9NSK0-4;C9JZE5 KLC4 Kinesin light chain 4 yes no 0 0 0 5.5 0.5 1 1 50.172 50.249 3 0.01162 14018 20230619_1886_Aki_TMTPro18x_K_F6 64.394 39.008 97507 79953 91659 87518 92035 104450 104840 96724 123480 88118 90290 89073 102450 82678 97035 95524 97830 101190 90118 73271 93586 88031 95967 104170 105510 99135 123320 89630 94739 90193 103900 86211 98801 96114 93619 96039 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30829000 27080 740 25436 50890;50891 41039;41040 41040 2 9606 Homo sapiens 0.08985954766080795 TLHNLVIQYASQGR Unmodified 1598.8529 0.85288884 3808;4492 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5;Q9H0B6;Q9H0B6-2;A8MZ87;A8MX29;E9PQ02 KLC1;KNS2;KLC2 Kinesin light chain 1;Kinesin light chain 2 no no 0 0 0 5.5 0.5 1 1 50.333 50.41 3 5.0893E-09 14064 20230619_1886_Aki_TMTPro18x_K_F6 162.1 134.77 74970 53832 60849 77331 65238 67105 74301 76302 86676 84955 79388 76472 85916 82900 80483 102730 82263 85611 69161 49497 63148 76000 67668 68839 74771 77554 87338 85149 82068 78288 87293 86288 82162 101900 78714 81483 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 350270000 27081 3808;4492 25437 50892;50893 41041 41041 1 9606 Homo sapiens 0.07741650903471964 TLHPAPNAPQPCQVSSLSER Unmodified 2188.0695 0.069499909 4229 Q8N3E9 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 yes yes 0 0 0 7 0 1 42.056 42.13 3 0.0096135 10120 20230619_1887_Aki_TMTPro18x_K_F7 58.997 54.367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27082 4229 25438 50894 41042 41042 1 9606 Homo sapiens 0.022987938842106814 TLHPAVHAGILAR Unmodified 1354.7834 0.78335271 3534;2560 B4DP06;C9JLK0;V9HWH7;P31939;P31939-2 ATIC;HEL-S-70p Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 0 3.5 0.5 1 1 37.192 37.241 4 2.578E-15 8418 20230619_1883_Aki_TMTPro18x_K_F4 196.24 175.72 225260 76512 191820 211580 184800 177790 177900 178140 234970 230890 250670 264790 249260 215840 220780 261270 240730 288010 207280 71444 197570 201860 192310 182190 181640 183480 236790 231560 256440 265560 253110 226670 226350 263190 230460 273100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 841510000 27083 2560;3534 25439 50895;50896 41043;41044 41044 2 9606 Homo sapiens 0.12015236745355651 TLHPDLGTDK Unmodified 1095.556 0.55603811 3370 V9HWB9;P00338;P00338-3;B4DJI1;P00338-4;P00338-5;P00338-2 HEL-S-133P;LDHA L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 4 0 1 41.355 41.398 3 0.00054302 10147 20230619_1883_Aki_TMTPro18x_K_F4 106.4 80.926 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27084 3370 25440 50897 41045 41045 1 9606 Homo sapiens 0.012082337467063553 TLHSCSVR Unmodified 958.46545 0.46544897 3646 P53618;E9PP73 COPB1 Coatomer subunit beta yes no 0 0 0 6.33 1.25 1 1 1 26.732 26.779 3 0.0025959 4567 20230619_1888_Aki_TMTPro18x_K_F8 102.46 43.547 24352 12182 31220 26526 38372 35913 30080 36170 32854 25790 35190 34378 33233 31840 26644 24359 42536 32312 22515 11289 31210 25720 39001 35593 30928 36631 33383 26888 35895 34426 33705 32521 28066 25060 40474 30643 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 17248000 27085 3646 25441 50898;50899;50900 41046;41047 41047 2 9606 Homo sapiens -0.015445137825508937 TLHSDDEGTVLDDSR Unmodified 1658.7384 0.73837217 2670 B7SBB1;O00170;D0EKE4;A5JGZ4;A0A804HKH9;D0EKE6;D5LTB3;C8CK04;C8CHN4;C0JXB8;D0EKE5;C0JXB9;C8CK05;A0A804HJ38;A0A804HIX8;E9PMH2;V9GYQ3;A0A804HKP8;D0EKE7;E5L4L0;A7YDK1;B3TMT2 AIP AH receptor-interacting protein;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 1 0 1 39.132 39.132 3 5.3731E-53 9719 20230619_1880_Aki_TMTPro18x_K_F1 313.31 241.76 145080 69980 178230 193030 186620 185000 177010 178350 195470 195750 229670 260120 211050 183160 184570 240570 227490 267350 134060 65169 178470 184460 192670 187360 179710 183220 199450 198790 233390 258480 214780 194470 190850 242140 217520 253500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 699630000 27086 2670 25442 50901 41048 41048 1 9606 Homo sapiens -0.06464748159805822 TLHYECIVLVK Unmodified 1373.7377 0.73770765 1968 A6NFX8;Q9UKK9;A6NJU6;A6NCQ0;H0YEY4 NUDT5 ADP-sugar pyrophosphatase yes no 0 0 0 1.5 0.5 1 1 53.873 53.887 3 0.00034016 15948 20230619_1880_Aki_TMTPro18x_K_F1 99.215 84.014 245030 174350 233870 250670 231390 247900 245260 238600 295510 324940 303690 289570 340080 279580 316770 346000 285270 334300 226300 160320 238540 246760 240950 250660 248100 246740 298800 322700 312720 295280 344690 292320 320970 345900 273590 317460 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 199070000 27087 1968 25443 50902;50903 41049;41050;41051 41050 3 9606 Homo sapiens 0.06578830448074768 TLIDDDNPPVSFVK Unmodified 1558.7879 0.78788854 3700 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 4.5 0.5 1 1 60.815 60.842 3 8.7097E-09 18671 20230619_1883_Aki_TMTPro18x_K_F4 127.02 110.67 45401 41140 49907 48143 46860 51918 51962 53239 56976 51758 54434 47666 57883 53862 55927 67582 57125 62080 42043 37711 50266 48116 49039 52250 52271 54251 57650 52282 56084 48857 58907 56059 57039 67351 54679 59004 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200090000 27088 3700 25444 50904;50905 41052 41052 1 9606 Homo sapiens 0.030846115869053392 TLIEAGLPQK Unmodified 1068.6179 0.61791009 3254 O43390;O43390-2;B2R7W4;B4DMB1;O43390-3;A0A6Q8PH35 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 6 2.92 1 1 2 53.743 53.79 2;3 8.1489E-11 15138 20230619_1888_Aki_TMTPro18x_K_F8 191.16 162.42 70030 66421 77681 73499 74871 79627 78572 78186 91507 87390 91977 81009 93413 74209 73463 92907 88803 96639 64878 60845 78201 73768 78057 80056 79437 80216 92510 87643 94308 82350 94316 77806 76012 93209 84872 91720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1719199999.9999998 27089 3254 25445 50906;50907;50908;50909 41053;41054;41055 41055 3 9606 Homo sapiens 0.08634585165850694 TLIEELK Unmodified 844.49058 0.49058431 3460 Q53X93;P16220;P16220-1;Q5U0J5;P16220-3;Q03060-21;Q03060-26;G5E998;B2R8K4;Q53RU9;Q03060-31;Q03060-32;Q03060-6;F1JVV6;E9PAR2;P18846-2;F1JVV5;Q59FC7;Q03060-23;Q03060-8;Q03060-9;Q03060-24;P18846 CREB1;CREM;EWSR1/ATF1 fusion;ATF1 Cyclic AMP-responsive element-binding protein 1;Cyclic AMP-dependent transcription factor ATF-1 yes no 0 0 0 4.5 0.5 1 1 56.276 56.338 2 0.021062 16383 20230619_1885_Aki_TMTPro18x_K_F5 103.75 3.3768 189250 154640 167660 181230 169970 208090 196010 188220 209000 276850 289450 321830 347800 279210 228590 342240 327580 396630 174830 141810 172260 181210 177270 207920 196590 196050 215710 276300 295820 323150 347370 292900 240650 345570 312950 375890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62659000 27090 3460 25446 50910;50911 41056;41057 41057 2 9606 Homo sapiens 0.06211864291663005 TLIGHVPDQR Unmodified 1134.6146 0.61455605 1445 Q6IB91;A0A384MTT2;Q16822;A0A0S2Z430;H0YML5;H0YM31;Q16822-2;Q16822-3;A0A0S2Z451;H0YNG4;H0YMA5 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 6.5 0.5 1 1 38.466 38.539 3 4.0566E-05 8948 20230619_1886_Aki_TMTPro18x_K_F6 140.78 98.036 34044 32822 38786 30125 31071 33644 39935 42720 43336 52086 50692 59397 45474 45981 54269 53492 56430 57551 31551 30019 38839 30752 33100 33989 39885 43244 44282 52320 51518 59466 47046 48236 55145 53868 53979 54615 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121460000 27091 1445 25447 50912;50913 41058 41058 1 9606 Homo sapiens 0.052633351118629434 TLIGYSAAELNR Unmodified 1306.6881 0.68811492 1994 Q8IYS3;Q53FW7;B2R8X4;A8IE48;Q06546 GABPA GA-binding protein alpha chain yes no 0 0 0 8 0 1 52.474 52.552 2 1.4364E-07 14641 20230619_1888_Aki_TMTPro18x_K_F8 146.71 131.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27092 1994 25448 50914 41059 41059 1 9606 Homo sapiens 0.04703838763657586 TLIHLFR Unmodified 898.53887 0.53887191 2585 E7EW05;B4DT66;Q9NVU7-2;Q9NVU7 SDAD1 Protein SDA1 homolog yes no 0 0 0 5.5 0.5 1 1 50.205 50.281 3 4.6575E-05 14008 20230619_1886_Aki_TMTPro18x_K_F6 139.92 72.885 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27093 2585 25449 50915;50916 41060;41061 41061 2 9606 Homo sapiens 0.08554402722222676 TLINELVK Unmodified 928.55933 0.55933258 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;Q6P2H7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 8 0 1 58.521 58.567 2 9.6862E-05 17209 20230619_1888_Aki_TMTPro18x_K_F8 180.87 20.239 328580 276310 299110 323870 294730 358820 338590 342420 379690 406830 420680 423860 426770 357690 417290 482050 412630 452530 303650 253350 306430 323660 308020 359780 340220 352660 386260 408150 430030 427390 434840 377700 424620 480580 395120 429980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 336750000 27094 3881 25450 50917 41062 41062 1 9606 Homo sapiens 0.09219528591370363 TLIQNCGASTIR Unmodified 1332.682 0.68198369 2435 B3KX11;P49368;Q59H77;B4DUR8;Q2TU64;P49368-2 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 3.67 3.09 1 1 1 43.176 43.206 2 2.1988E-09 11493 20230619_1880_Aki_TMTPro18x_K_F1 214.04 170.6 575700 459650 525910 562670 540100 630080 596610 585800 650240 649560 613400 542880 648440 516510 535840 736990 661560 605840 531870 421720 538860 560670 561790 630950 599980 603170 658190 649870 632050 555580 655250 545400 554900 729120 631380 577020 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1516599999.9999998 27095 2435 25451 50918;50919;50920 41063;41064;41065;41066 41063 4 9606 Homo sapiens 0.02894997260477794 TLLADKGEIR Unmodified 1114.6346 0.63462279 2900;2897 E9PCS8;E7EQY4;E7EV10;Q9BTC8-2;Q9BTC8;F6RRE2;Q53RX8;E7ESY4;Q13330-3;Q13330;A0A024R6P5;Q13330-2;Q86TR6 MTA3;tmp_locus_6;MTA1 Metastasis-associated protein MTA3;Metastasis-associated protein MTA1 no no 0 0 1 7.5 0.5 1 1 45.45 45.507 3 0.0020716 11508 20230619_1887_Aki_TMTPro18x_K_F7 89.356 55.27 317660 276750 305190 318260 322650 327970 346330 331020 324380 378800 418860 286690 341640 244100 358220 274290 294100 193390 293760 253680 311370 318230 334060 331140 347270 339230 335600 377300 421080 294030 351400 254970 359930 270990 281310 184910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 336020000 27096 2897;2900 25452 50921;50922 41067 41067 1 9606 Homo sapiens 0.08189086051788763 TLLADQGEIR Unmodified 1114.5982 0.59823728 317 A0A024R534;O94776 MTA2 Metastasis-associated protein MTA2 yes no 0 0 0 3.5 0.5 1 1 46.387 46.447 2 2.7673E-09 12504 20230619_1882_Aki_TMTPro18x_K_F3 195.58 144.7 251030 196700 213470 250930 240520 297160 292410 269850 298700 300790 290280 282450 338930 254300 251570 315020 290080 306540 231770 180560 220690 249480 249360 296250 291910 278420 303730 301790 300230 286650 339990 266640 259830 314930 277290 291190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 249930000 27097 317 25453 50923;50924 41068;41069 41068 2 9606 Homo sapiens 0.04552209155099263 TLLAILR Unmodified 798.53272 0.5327239 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 5.5 0.5 1 1 60.406 60.461 2 0.026048 18088 20230619_1885_Aki_TMTPro18x_K_F5 97.068 10.201 362130 352420 288430 244600 392570 656280 371840 364350 706920 103060 88317 106600 115940 90934 137350 121350 115400 119800 334680 321720 300730 261510 401660 625350 385780 385100 674570 119870 121020 107740 118740 95961 137980 121420 110660 113790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78448000 27098 1091 25454 50925;50926 41070 41070 1 9606 Homo sapiens 0.12539884490718123 TLLDQHGQYPIWMNQR Oxidation (M) 2014.9683 0.9683293 652 A0A024RB76;Q9BRT6 C12orf31;LLPH Protein LLP homolog yes no 0 1 0 1 0 1 51.558 51.558 3 0.019325 15002 20230619_1880_Aki_TMTPro18x_K_F1 49.049 42.886 27828 29548 29144 33939 33049 31052 35952 33348 34969 31105 34064 31217 36689 25084 36640 31113 27504 29049 25789 27067 29581 33882 34037 31695 36046 33868 35636 31556 35099 31491 37301 26422 36725 31074 26414 27607 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28956000 27099 652 25455 50927 41071 41071 394 1 9606 Homo sapiens 0.001443869721470037 TLLEAENSR Unmodified 1031.5247 0.52473799 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 2 0 1 41.716 41.792 2 0.089251 10631 20230619_1881_Aki_TMTPro18x_K_F2 57.55 41.668 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27100 2830 25456 50928 41072 41072 1 9606 Homo sapiens 0.010236607126216768 TLLEEEYFR Unmodified 1198.587 0.58700389 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 3 0 1 56.764 56.8 2 3.1182E-05 17094 20230619_1882_Aki_TMTPro18x_K_F3 166.82 142.96 141440 124000 123150 123070 103770 122970 117930 124850 126500 159110 148310 134380 162790 136070 143790 158620 153170 157710 130700 113520 126320 124470 109820 124460 118450 128300 129440 158160 151680 137630 164750 141540 147150 158950 146490 149790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 445080000 27101 1853 25457 50929 41073 41073 1 9606 Homo sapiens -0.004346129390569331 TLLEFLK Unmodified 862.51641 0.51640513 3882 Q14232;F5H0D0;Q14232-2;H0YGG4 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes no 0 0 0 2 0 1 63.431 63.44 2 0.063275 20175 20230619_1881_Aki_TMTPro18x_K_F2 80.229 32.313 53196 50980 51330 51779 45787 68317 58918 52615 70471 58544 64900 59859 72318 64835 67701 68489 62648 73260 49227 46664 52245 52460 48508 67446 58988 55008 70868 58951 67146 60914 73366 66906 68653 69038 60064 69493 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 464530000 27102 3882 25458 50930 41074 41074 1 9606 Homo sapiens 0.07964758533944405 TLLEFLKR Unmodified 1018.6175 0.61751616 3882 Q14232;F5H0D0;Q14232-2;H0YGG4 EIF2B1 Translation initiation factor eIF-2B subunit alpha yes no 0 0 1 5.5 0.5 1 1 59.468 59.525 3 0.00078129 17715 20230619_1885_Aki_TMTPro18x_K_F5 127.56 29.173 134910 136330 142560 144670 126830 84870 147310 131410 84713 120160 117340 58170 61312 46306 135780 52482 49268 14940 124990 124810 143880 144770 132890 91665 145500 130830 91254 119970 116170 61568 67722 48507 131520 50843 47738 14713 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31837000 27103 3882 25459 50931;50932 41075 41075 1 9606 Homo sapiens 0.10895210236662933 TLLEGEESR Unmodified 1032.5088 0.50875357 2778 H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2;H6VRF9 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 1.33 0.471 2 1 42.033 42.059 2 3.7954E-17 10705 20230619_1880_Aki_TMTPro18x_K_F1 248.99 221.29 + 107300 124990 150730 109790 2840400 263200 692490 208290 482090 132830 155860 171440 196520 773330 171180 148750 244680 197830 99813 114220 185820 109390 2656400 261450 813670 215800 492460 141250 177490 192580 202450 742120 178400 162880 233070 187550 3 3 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 403550000 27104 2778 25460 50933;50934;50935 41076;41077;41078 41076 3 9606 Homo sapiens -0.00620045524260604 TLLENTAITIGR Unmodified 1300.7351 0.73506511 629;445 A0A024RAM0;Q92973-2;Q92973;A0A7P0Z4D3;Q92973-3;S4R398;B4DRY5;A0A024R7F7;O14787-2;Q4LE60 TNPO1;TNPO2;TNPO2 variant protein Transportin-1;Transportin-2 no no 0 0 0 4.5 3.5 1 1 56.512 56.541 2 1.9688E-13 17076 20230619_1880_Aki_TMTPro18x_K_F1 215.79 164.94 179520 170670 179880 180280 166260 182270 174330 157520 200550 207830 210610 199220 208100 182070 207930 242040 223570 242380 166170 156270 182480 181390 174010 183710 176170 164070 203300 207120 215450 202140 212510 191550 212500 242170 213890 230140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 452020000 27105 629;445 25461 50936;50937 41079;41080 41079 2 9606 Homo sapiens 0.09672698314784611 TLLEQLDDDQ Unmodified 1188.551 0.55101232 1683 A0A8Q3SIG7;A0A8V8TM87;A0A8V8TM61;F5H578;A0A7N4I394;O75400-2;O75400;O75400-3;Q4ZG51 PRPF40A;FNBP3 Pre-mRNA-processing factor 40 homolog A yes no 0 0 0 1 0 1 62.447 62.447 2 1.9587E-13 19469 20230619_1880_Aki_TMTPro18x_K_F1 220.51 203.74 62313 55966 61023 65029 56962 66519 70215 66795 82351 79179 74876 78059 80830 71437 77287 88527 89396 88726 57644 51300 62069 64963 59885 67163 70396 68563 82921 79336 77466 79068 82177 74805 79382 88665 85412 84273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100340000 27106 1683 25462 50938 41081 41081 1 9606 Homo sapiens -0.03572114906569368 TLLESERER Unmodified 1131.5884 0.58840088 3316 Q6UQL6;O75792;Q6IBG3;A0A2R8Y658 RNASEH2A;JUNB Ribonuclease;Ribonuclease H2 subunit A yes no 0 0 1 2.5 0.5 1 1 34.785 34.843 3 2.626E-05 7590 20230619_1881_Aki_TMTPro18x_K_F2 151.22 90.858 66142 55652 57531 63291 67705 72030 63684 59512 71963 65216 81235 66707 74115 59607 64376 80439 79476 68726 61105 51014 59337 63404 69423 71913 64708 61837 73177 65678 82486 67505 75390 62818 66554 79799 75822 65440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67100000 27107 3316 25463 50939;50940 41082 41082 1 9606 Homo sapiens 0.027870211497202035 TLLHTLCK Unmodified 984.54264 0.54263666 3873 Q14008-2;Q14008;Q14008-3;Q8IYN5 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 3.5 0.5 1 1 46.249 46.31 3 0.013758 12508 20230619_1882_Aki_TMTPro18x_K_F3 71.223 54.552 304690 240350 259260 307050 306470 309790 290050 305840 354490 279330 258430 231380 286970 216610 278340 294330 292520 282110 281330 220630 268080 304590 314140 313020 295400 312000 353600 282410 270780 236760 291440 228210 284050 293790 279680 268110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 285920000 27108 3873 25464 50941;50942 41083;41084 41084 2 9606 Homo sapiens 0.049747044337891566 TLLLCGYPNVGK Unmodified 1333.7064 0.70640752 2806 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;Q9BZE4-2;B4DHR2;Q9BZE4-3;O60747;Q5T3R7 GTPBP4 Nucleolar GTP-binding protein 1 yes no 0 0 0 4 0 1 59.28 59.282 3 8.1031E-05 18070 20230619_1883_Aki_TMTPro18x_K_F4 113.63 102.42 100300 84974 105270 122390 87692 109480 118280 109380 106170 124030 92801 93713 123810 107330 98413 146950 131770 131560 92804 78083 106390 120300 93322 111630 117120 112190 108480 123630 97220 97029 124230 112370 102630 146010 125750 125120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 276580000 27109 2806 25465 50943 41085 41085 1 9606 Homo sapiens 0.05290257414003463 TLLLDGNPFR Unmodified 1144.6241 0.6240581 1188 A0A140VJN3;Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes no 0 0 0 2 0 1 60.91 60.921 2 0.00036074 18990 20230619_1881_Aki_TMTPro18x_K_F2 111.39 98.865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27110 1188 25466 50944 41086 41086 1 9606 Homo sapiens 0.05753103397364612 TLLLNPK Unmodified 797.50109 0.50108942 757 A0A024RDD6;A0AVI5;Q6ZVF9 LOC285513;GPRIN3 G protein-regulated inducer of neurite outgrowth 3 yes no 0 0 0 3.5 0.5 1 1 54.925 54.954 3 0.0093338 16334 20230619_1882_Aki_TMTPro18x_K_F3 85.357 0 88119 83347 87168 84776 69911 81502 81095 73394 86490 83502 91510 75890 85776 65126 85698 97911 89442 65333 81553 76295 88348 85513 74316 82525 81323 75858 87987 83628 93308 77120 87668 69255 87413 96017 85374 62487 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 346950000 27111 757 25467 50945;50946 41087 41087 1 9606 Homo sapiens 0.09423891736764745 TLLPLLLESSTESVAEISSNSLER Unmodified 2587.3592 0.35924237 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;Q5T4S7-5 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 6.5 0.5 1 1 66.684 66.717 3 2.6592E-13 20815 20230619_1887_Aki_TMTPro18x_K_F7 127.05 113.86 2442.5 1174.7 2557 2345.7 1439.9 2587.1 2610.7 1840.1 1117.4 2632.7 2545.4 2488 1723.2 1810.1 3125.2 1829.5 2255.6 3440.4 2253.6 1087.3 2571.4 2273.8 1618.9 2576.3 2519.6 1955.6 1284 2610.7 2511.7 2506.6 1852.1 1892.2 3098.6 1931.8 2174.8 3246.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17255000 27112 4061 25468 50947;50948 41088 41088 1 9606 Homo sapiens 0.12905712130850588 TLLQVLGGTILESER Unmodified 1627.9145 0.91448604 1509 A0A3B3ISH6;Q5HYL4;Q86U38-2;Q86U38 DKFZp686E1893;NOP9 Nucleolar protein 9 yes no 0 0 0 1.5 0.5 1 1 65.494 65.497 3 0.016709 20740 20230619_1880_Aki_TMTPro18x_K_F1 58.83 44.827 6933.5 5006.9 9019.4 6280 4420.2 6309.4 9718.3 7640.3 10040 12739 15870 14899 16407 13377 13953 16837 12307 14832 6422.5 4596.8 8907.3 6246.5 5099.9 6405.9 9504.3 7854.4 10442 12662 16023 14984 16600 14029 14159 16744 11809 14099 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 13238000 27113 1509 25469 50949;50950 41089 41089 1 9606 Homo sapiens 0.12564537812113485 TLLRDEK Unmodified 873.49198 0.4919813 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 1 6 0.816 1 1 1 38.634 38.714 3 0.041134 9001 20230619_1886_Aki_TMTPro18x_K_F6 75.189 22.404 462580 352260 400640 437110 583570 540260 516980 520400 659440 542560 679010 671810 612260 540190 579550 610010 716220 630120 427070 323300 414990 435810 589450 538300 529430 533550 664030 551280 692700 671790 625700 565070 597580 612990 683360 598590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 232240000 27114 1292 25470 50951;50952;50953 41090 41090 1 9606 Homo sapiens 0.050174983804254225 TLLSDPTYR Unmodified 1064.5502 0.55022446 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;F5H783 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 0 7 0.816 1 1 1 46.822 46.895 2 5.0739E-08 12507 20230619_1886_Aki_TMTPro18x_K_F6 198.65 133.61 1232900 986910 1080800 1154100 989910 1104500 1092900 1088100 1233100 1458700 1451100 1475200 1543600 1255700 1333000 1622800 1609200 1654000 1138700 905070 1109500 1151400 1038800 1120600 1100900 1122900 1258200 1454400 1482700 1489300 1562200 1322300 1376000 1625700 1537300 1570400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2397500000 27115 2088 25471 50954;50955;50956 41091;41092;41093 41091 3 9606 Homo sapiens 0.020531352350417365 TLLSVPGYK Unmodified 976.55933 0.55933258 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;P26640-2 VARS Valine--tRNA ligase yes no 0 0 0 3.5 0.5 2 2 55.729 55.754 2;3 0.00065024 16521 20230619_1883_Aki_TMTPro18x_K_F4 144.12 121.1 239090 194680 220100 238010 208500 245250 240980 239910 260060 337060 314390 317120 369740 304690 313940 366610 338660 355420 220930 178600 225110 236910 218520 247330 241780 248050 266450 334720 322440 322390 372850 318050 321870 366650 323900 337630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 831820000 27116 725 25472 50957;50958;50959;50960 41094;41095 41095 2 9606 Homo sapiens 0.0701152859138574 TLLVADPR Unmodified 883.51272 0.51271674 3200 M0R210;P62249 RPS16 40S ribosomal protein S16 yes no 0 0 0 6.5 1.12 1 1 1 1 46.097 46.169 2 0.0025305 12136 20230619_1886_Aki_TMTPro18x_K_F6 125.25 41.638 1078500 848200 920100 1005800 986780 1127400 1118300 1051300 1226300 1108600 1137000 1075700 1220700 908130 1022200 1316900 1272000 1160200 995810 778020 949470 1004500 1023900 1129100 1123100 1081000 1239500 1116500 1173900 1088600 1233200 964320 1058300 1307100 1213900 1104000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3586499999.9999995 27117 3200 25473 50961;50962;50963;50964 41096;41097 41096 2 9606 Homo sapiens 0.06630088760084618 TLLVNNNR Unmodified 942.52468 0.52467841 3422 Q53G61;Q53G21;P09661;H0YKK0;Q6NVW9 SNRPA1 U2 small nuclear ribonucleoprotein A' yes no 0 0 0 1.5 0.5 1 1 39.221 39.254 2 0.00086606 9440 20230619_1881_Aki_TMTPro18x_K_F2 154.31 123.59 267860 193420 232620 211270 265750 298610 251400 256310 334900 281670 324680 327210 340410 281560 275180 373810 368570 328960 247230 177340 239580 213150 273310 294400 256920 265360 335890 284850 334200 328750 343880 296740 286650 371370 351470 313060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 522130000 27118 3422 25474 50965;50966 41098 41098 1 9606 Homo sapiens 0.051117055032818826 TLLWTELFR Unmodified 1177.6495 0.64954457 344 E9PKH6;A0A024R5K3;E9PPW7;Q53G17;O00217;E9PN51;F8W9K7;B4DYI3 NDUFS8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes no 0 0 0 4 0 1 64.818 64.828 2 0.00082271 20359 20230619_1883_Aki_TMTPro18x_K_F4 122.13 102.36 13071 9782.1 12678 13171 14810 15277 14246 15012 17864 11804 10915 9702.7 12953 12211 16294 13117 12860 14085 12077 8986.2 12944 13050 15197 15282 14506 15265 17705 12053 11617 10042 13322 12561 16303 13231 12346 13363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34193000 27119 344 25475 50967 41099 41099 1 9606 Homo sapiens 0.06782577919807409 TLMAQSIYGGR Unmodified 1195.6019 0.60194245 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4 0 1 49.165 49.203 2 0.00094944 13622 20230619_1883_Aki_TMTPro18x_K_F4 122.57 103.76 95339 80420 89646 98757 123190 109920 109670 109550 121290 96595 94277 85723 95422 89707 110150 105030 102070 86669 88131 73771 92066 98376 124750 110360 111690 111590 121810 98042 98045 87724 98118 93158 111270 104310 97629 82570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54491000 27120 3881 25476 50968 41100 41100 1 9606 Homo sapiens 0.011965556572704372 TLMECVSNTAK Unmodified 1252.5792 0.5791581 4150 Q7L0Y3;C9JVB6 TRMT10C Mitochondrial ribonuclease P protein 1 yes no 0 0 0 7.5 0.5 1 1 49.676 49.754 3 6.7671E-05 13408 20230619_1888_Aki_TMTPro18x_K_F8 104.82 78.706 70588 51475 63492 53242 62986 80059 69874 68994 90384 58647 67180 69423 83666 54360 63867 71973 84353 73514 65172 47172 65031 54022 65785 78653 70676 70954 89892 60219 70734 69507 83842 57575 66458 72104 80435 69848 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 316490000 27121 4150 25477 50969;50970 41101 41101 1 9606 Homo sapiens -0.037028315224915787 TLMELLNQMDGFDTLHR Unmodified 2032.971 0.97103142 896 V9HW24;A0A087X2I1;P62333 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 8 0 1 65.123 65.143 3 2.055E-13 20002 20230619_1888_Aki_TMTPro18x_K_F8 151.11 123.26 44200 48910 48096 40534 53824 48964 58434 63085 56379 53630 55125 53635 58104 47906 58402 55612 51434 50301 40990 44682 48569 41824 55462 49264 58604 63177 57509 54682 56757 54273 59198 50012 58982 55483 49271 47837 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20460000 27122 896 25478 50971 41102 41102 1 9606 Homo sapiens -0.004135256852350722 TLMNLGGLAVAR Oxidation (M) 1230.6754 0.67544174 1438 A0A384MTL2;P37802;P37802-2;X6RJP6 TAGLN2 Transgelin-2 yes no 0 1 0 3.5 0.5 1 1 52.902 52.944 2 0.00036687 15454 20230619_1882_Aki_TMTPro18x_K_F3 106.37 91.283 342400 314110 295270 332710 292460 305890 399780 395500 436480 271520 236290 198770 212830 162820 280450 256810 230760 209100 316490 287660 304100 334360 306830 313550 397780 394540 434060 278990 250770 204140 221110 174190 281120 253970 221120 199190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 619760000 27123 1438 25479 50972;50973 41103;41104 41103 929 2 9606 Homo sapiens 0.06933104099766751 TLMNLGGLAVAR Unmodified 1214.6805 0.68052712 1438 A0A384MTL2;P37802;P37802-2;X6RJP6 TAGLN2 Transgelin-2 yes no 0 0 0 4.8 0.748 2 2 1 59.323 59.358 2;3 3.5423E-13 17607 20230619_1885_Aki_TMTPro18x_K_F5 167.18 138.97 180420 167370 179230 177390 129930 160110 218840 211150 239000 126620 103670 81827 104310 85515 145380 115870 102590 83891 166960 153270 181480 178270 141350 164390 216010 209940 236540 131280 112740 85386 108400 89706 144580 114270 98444 80088 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1811399999.9999998 27124 1438 25479 50974;50975;50976;50977;50978 41105;41106 41106 2 9606 Homo sapiens 0.0817740796239832 TLNASDVLSAMEEMEFQR Unmodified 2069.9398 0.93979087 488 A0A024R829;Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 yes no 0 0 0 5 0.816 1 1 1 65.35 65.382 3 9.3714E-10 20330 20230619_1885_Aki_TMTPro18x_K_F5 136.35 128.45 17927 18189 19246 16477 17994 20497 18100 23990 19559 18324 25187 25589 25500 21024 19152 23613 24943 28977 16612 16631 19404 16861 18794 20511 18319 24094 20056 19033 25584 25506 25710 21981 19933 23973 23837 27451 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 128900000 27125 488 25480 50979;50980;50981 41107;41108;41109 41108 3 9606 Homo sapiens -0.052381435099505325 TLNDELEIIEGMK Unmodified 1503.7491 0.7490602 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;B7Z532;Q53SE2;E7ESH4;E7EXB4 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 4 0 1 63.82 63.828 3 0.00014232 19976 20230619_1883_Aki_TMTPro18x_K_F4 96.734 83.533 12570 14708 21824 10653 28473 19355 21792 30027 17454 12628 14875 11152 16781 9043.9 21411 13515 13976 12448 11725 13423 21417 11262 28733 19197 22257 29422 17923 13629 15460 11351 17243 9659.9 21236 13474 13433 11840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 287510000 27126 272 25481 50982 41110 41110 1 9606 Homo sapiens 0.017335629609306125 TLNDELEIIEGMK Oxidation (M) 1519.744 0.74397482 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;B7Z532;Q53SE2;E7ESH4;E7EXB4 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 1 0 4 0 1 62.282 62.287 3 0.0011551 19289 20230619_1883_Aki_TMTPro18x_K_F4 84.297 62.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27127 272 25481 50983 41111 41111 169 1 9606 Homo sapiens 0.004892590982990441 TLNEADCATVPPAIR Unmodified 1626.8036 0.80355538 21 A0A024QZ30;P31040;P31040-2;D6RFM5;B3KT34;P31040-3;B3KYA5 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 4 0 1 48.07 48.11 3 6.6197E-06 13098 20230619_1883_Aki_TMTPro18x_K_F4 119.31 102.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27128 21 25482 50984 41112 41112 1 9606 Homo sapiens 0.015225748323473454 TLNEWDSR Unmodified 1019.4672 0.46722311 3242 O15371-2;O15371-3;O15371;B4E1K8 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 0 2.5 0.5 1 1 44.019 44.095 2 0.0012811 11413 20230619_1882_Aki_TMTPro18x_K_F3 145.13 109.25 461870 371510 433190 425220 482230 513520 516690 523660 555010 579340 562840 510600 626240 499790 482870 574950 654690 594990 426820 340630 443130 426370 497830 512920 520210 535540 563900 580390 579390 521260 630250 520190 503480 577430 624330 565130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 422680000 27129 3242 25483 50985;50986 41113;41114 41114 2 9606 Homo sapiens -0.041731814929448774 TLNEWSSQINPDLVR Unmodified 1770.8901 0.89006221 2822 D3DT44;P48507 GCLM Glutamate--cysteine ligase regulatory subunit yes no 0 0 0 7 0 1 59.52 59.566 2 9.6204E-11 17634 20230619_1887_Aki_TMTPro18x_K_F7 166.62 139.95 21974 16954 20349 24828 20013 26157 21243 23918 26976 25332 25113 28562 28537 24363 23955 28706 25638 30367 20299 15588 20831 24428 20893 26279 21535 24625 27088 25627 26023 28698 28800 25499 24561 28857 24546 28808 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15355000 27130 2822 25484 50987 41115 41115 1 9606 Homo sapiens 0.03545277658577106 TLNMTTSPEEK Oxidation (M) 1265.5809 0.58093224 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 1 0 3.5 0.5 2 2 39.756 39.806 2;3 0.00030309 9404 20230619_1883_Aki_TMTPro18x_K_F4 96.745 59.319 41636 27929 32943 38513 46390 45631 48350 46216 51519 44033 54360 50187 51119 44937 47376 56658 55463 57642 38389 25676 34424 38105 47147 45618 48716 47117 52382 44817 55470 50540 52113 47138 48741 56774 53004 54730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 111040000 27131 1182 25485 50988;50989;50990;50991 41116;41117 41117 727 2 9606 Homo sapiens -0.0412349923290094 TLNMTTSPEEK Unmodified 1249.586 0.58601761 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 4.5 0.5 1 1 45.557 45.618 3 0.00012363 11983 20230619_1883_Aki_TMTPro18x_K_F4 117.79 80.367 135150 115960 125750 135420 144360 153300 146660 138570 190880 166180 173690 144270 176130 153920 137780 174370 175780 159200 124940 106310 128860 135410 148580 153370 149070 143330 191220 165920 178860 147900 177930 159530 143070 173960 167700 151430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210450000 27132 1182 25485 50992;50993 41118 41118 1 9606 Homo sapiens -0.028791953702693718 TLNQQLTNHIR Unmodified 1336.7211 0.72114638 3619 P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96;K7EMQ3;B4DJ53 DNM2 Dynamin-2 yes no 0 0 0 2 0 1 38.948 39.014 3 8.8851E-07 9328 20230619_1881_Aki_TMTPro18x_K_F2 162.93 115.37 153310 124880 170080 190620 174850 159560 166040 152230 176540 206750 183430 190060 212730 172120 174410 199650 191480 179910 141890 114850 171510 186600 180690 163600 168310 157610 179810 205480 189180 192990 214300 179620 179100 199040 182960 171130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 319910000 27133 3619 25486 50994 41119 41119 1 9606 Homo sapiens 0.06625465606339276 TLPADQKPECR Unmodified 1313.6398 0.63978452 1260 A0A1B0GVH5;A0A1B0GTC3;B3KU60;Q9C0B1;B4DHN4;A0A1B0GUY7;Q9C0B1-4;Q9C0B1-2;Q9C0B1-3 FTO Alpha-ketoglutarate-dependent dioxygenase FTO yes no 0 0 1 5 0 1 36.809 36.902 3 0.0025762 8251 20230619_1885_Aki_TMTPro18x_K_F5 90.614 66.937 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27134 1260 25487 50995 41120 41120 1 9606 Homo sapiens -0.00448978147892376 TLPAHSDPVSAVHFNR Unmodified 1746.8802 0.88016622 3700 P61964 WDR5 WD repeat-containing protein 5 yes yes 0 0 0 8 0 1 41.655 41.652 4 8.801600000000001E-35 10149 20230619_1888_Aki_TMTPro18x_K_F8 266.15 247.96 31147 23306 27342 28201 30868 32298 25423 31662 33192 30507 30909 34214 26420 26531 29572 28138 34127 40377 28756 21386 28140 28137 31649 32340 26215 32341 33287 31003 31651 34283 27291 27706 30261 28937 32652 38197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65117000 27135 3700 25488 50996 41121 41121 1 9606 Homo sapiens 0.03660134443816787 TLPDEVLTK Unmodified 1014.5597 0.55972651 4478 Q9BZZ5-2;Q9BZZ5-1;Q9BZZ5;Q9BZZ5-5;Q9BZZ5-6;Q9BZZ5-3;H0YER7 API5 Apoptosis inhibitor 5 yes no 0 0 0 5.5 0.5 1 1 53.073 53.147 2 1.11E-05 15103 20230619_1885_Aki_TMTPro18x_K_F5 195.05 105.9 303360 264830 270590 293690 293440 351650 346200 327840 372910 364830 396910 379010 413540 332750 361870 419170 382360 404240 280380 242670 278160 295050 304680 350650 346780 337570 379320 367180 406690 382720 418920 349400 370340 418840 365790 384020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 710130000 27136 4478 25489 50997;50998 41122 41122 1 9606 Homo sapiens 0.053029035205554464 TLPDVLAEPLSSER Unmodified 1525.7988 0.79878758 2999 F8WEC0;Q9H3L0 MMADHC Methylmalonic aciduria and homocystinuria type D protein, mitochondrial yes no 0 0 0 4 0 1 59.882 59.884 2 0.00036398 18302 20230619_1883_Aki_TMTPro18x_K_F4 96.229 76.443 20516 13910 14182 17023 15505 18542 16968 16312 24162 19005 21334 21074 20548 18919 22141 21324 21500 22922 18902 12771 14972 16952 16082 18582 17240 16896 24074 19142 21989 21230 21082 19708 22447 21484 20587 21749 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23230000 27137 2999 25490 50999 41123 41123 1 9606 Homo sapiens 0.05692013961242992 TLPETLDPAEYNISPETR Unmodified 2044.9953 0.99531514 3344 O95168-2;O95168;F2Z3P9;C9JXQ9 NDUFB4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 yes no 0 0 0 3 0 1 60.053 60.082 3 9.3663E-10 18465 20230619_1882_Aki_TMTPro18x_K_F3 136.35 117.52 55289 27510 55316 55078 52670 54987 56501 55851 73208 67487 58943 57699 70179 55796 59322 65049 62652 62851 50999 25459 56141 53320 55022 55595 57267 57309 73091 67305 61623 58944 70731 58136 60728 65085 59914 59719 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19662000 27138 3344 25491 51000 41124 41124 1 9606 Homo sapiens 0.014617292736829768 TLPFQLSSVEK Unmodified 1247.6762 0.67615325 4760 Q9Y6X9;Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 yes no 0 0 0 2 0 1 60.212 60.224 3 0.00062102 18714 20230619_1881_Aki_TMTPro18x_K_F2 94.538 68.126 38252 34543 38610 42130 36888 46143 47470 39941 49915 42838 40424 44509 43481 38360 42455 48617 45575 42020 35396 31678 39201 41971 38770 46203 47301 41340 50320 43210 42095 44894 44250 40295 43394 48309 43551 39994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107380000 27139 4760 25492 51001 41125 41125 1 9606 Homo sapiens 0.06222222020483059 TLPGGQPPPR Unmodified 1018.556 0.55597854 3283 O60568;B3KQQ3 PLOD3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes no 0 0 0 8 0 1 36.767 36.754 2 0.00040268 8110 20230619_1888_Aki_TMTPro18x_K_F8 127.46 92.638 29442 21968 21366 23765 32097 30747 33473 29473 39412 25739 30240 29926 25645 24859 27446 26223 34461 29771 27148 20138 22552 23952 32516 30551 33821 30105 39396 26367 31260 30021 26439 25870 28255 26536 32872 28257 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21377000 27140 3283 25493 51002 41126 41126 1 9606 Homo sapiens 0.04744278537373248 TLPGSDWTPNAQFITR Unmodified 1802.8951 0.89514758 2037 A8K492;P56192;B4DF61;B4E0E9;P56192-2 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 0 0 1.5 0.5 1 1 59.928 59.934 3 2.8232999999999997E-19 18596 20230619_1881_Aki_TMTPro18x_K_F2 201.3 168.59 64290 53363 61654 62889 47520 62609 61707 64710 77814 69192 63119 67460 67603 58516 74339 74088 70350 71286 59432 48935 62655 62747 50969 63363 61913 66080 77764 69647 65702 68249 69186 61474 75253 74050 67355 67734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 256950000 27141 2037 25494 51003;51004 41127 41127 1 9606 Homo sapiens 0.02581581521167209 TLPGWNTDISNAR Unmodified 1443.7106 0.71064128 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 0 0 4.5 3.5 1 1 53.18 53.18 2 8.055E-19 14926 20230619_1888_Aki_TMTPro18x_K_F8 245.13 195.41 33939 27822 32107 33340 26407 38786 35501 38306 36578 49271 39962 42630 48124 36808 38442 44791 44477 45799 31369 25518 32703 33294 28199 38773 35321 39438 37414 48975 41213 43350 48369 38614 39628 44921 42506 43484 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7583000 27142 351 25495 51005;51006 41128;41129 41129 2 9606 Homo sapiens 0.006534381612937068 TLPPATSTEPSVILSK Unmodified 1639.9033 0.90325265 567 A0A024R9D2;Q86UE4;E5RJU9;H0YBJ8 MTDH Protein LYRIC yes no 0 0 0 8 0 1 56.348 56.405 3 2.7219E-05 16418 20230619_1888_Aki_TMTPro18x_K_F8 96.489 82.459 47288 41066 49383 49408 43464 54931 47531 47945 56524 58194 57633 58168 63434 55630 54914 69546 60088 63584 43759 37660 49906 49289 45785 54957 47993 49740 57145 58273 59332 58983 64166 58188 56359 69289 57466 60443 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159650000 27143 567 25496 51007 41130 41130 1 9606 Homo sapiens 0.1088971571791717 TLPQAEALDR Unmodified 1112.5826 0.58258722 4173 Q7Z4Y4;Q9UIJ7;Q7Z531;B3KWD9;Q9UIJ7-2;Q9UIJ7-3 AK3 GTP:AMP phosphotransferase AK3, mitochondrial yes no 0 0 0 3 0 1 44.555 44.628 2 2.4739E-05 11639 20230619_1882_Aki_TMTPro18x_K_F3 171.87 116.43 136630 103900 131620 127090 145680 158570 169580 176240 178650 136820 155630 177060 151470 140120 163320 175000 175590 190170 126240 95344 134330 126910 150810 158340 169870 177720 180400 141620 160780 176690 155390 147540 166610 176110 167980 180410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98638000 27144 4173 25497 51008 41131 41131 1 9606 Homo sapiens 0.03079922638039534 TLPQEPGKPQK Unmodified 1221.6717 0.67173657 2915 E9PGC8;P78559;P78559-2;A8K4T7 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 1 8 0 1 41.737 41.734 3 0.062385 10204 20230619_1888_Aki_TMTPro18x_K_F8 46.592 25.752 22033 15822 19630 24720 30839 39475 24093 25454 45811 28619 36171 37718 42746 31259 31285 41291 42365 42548 20340 14562 20345 24391 31062 38446 25339 27051 45002 29086 37839 37678 42854 33006 32680 41370 40429 40398 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8946600 27145 2915 25498 51009 41132 41132 1 9606 Homo sapiens 0.06976757597567484 TLPQLPNEEK Unmodified 1167.6136 0.61355299 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B4DL23 CEP170 Centrosomal protein of 170 kDa yes no 0 0 0 5.5 0.5 1 1 50.449 50.525 3 0.00028329 13967 20230619_1885_Aki_TMTPro18x_K_F5 113.93 91.285 72784 56428 68852 74050 67825 79661 76228 74044 76208 81236 91291 89342 84380 71066 85380 94592 93883 98028 67249 51815 70291 73397 70788 79980 76399 76243 78247 81939 92655 89743 86382 75158 87326 94840 89773 93056 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55710000 27146 1960 25499 51010;51011 41133 41133 1 9606 Homo sapiens 0.036450759522722365 TLPTEAMWK Unmodified 1075.5372 0.53721693 4630 Q9NYH9;B3KX32;B3KQ21 UTP6 U3 small nucleolar RNA-associated protein 6 homolog yes no 0 0 0 8 0 1 56.864 56.921 3 0.003039 16530 20230619_1888_Aki_TMTPro18x_K_F8 83.783 66.416 39040 37873 46101 46431 41380 44321 47148 44461 53473 41739 44057 43714 48007 35975 49081 47406 46261 42157 36195 34725 46174 46169 43482 44990 47404 45362 53708 42407 45830 44043 48889 37981 49723 47171 44261 40112 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14317000 27147 4630 25500 51012 41134 41134 1 9606 Homo sapiens 0.0024698085128420644 TLQEDLVK Unmodified 944.51786 0.51786169 1633 A0A6Q8PGB0;P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 0 4 0 1 49.856 49.89 2 0.0098628 13943 20230619_1883_Aki_TMTPro18x_K_F4 107.15 43.668 60534 38720 59693 57059 57267 62461 54429 60651 73032 78855 82724 82277 82699 83923 58820 92917 98673 100440 55891 35631 60643 56181 59631 62697 55671 62551 73772 78831 84370 83443 83401 86943 62621 93547 94037 95314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123320000 27148 1633 25501 51013 41135 41135 1 9606 Homo sapiens 0.04338347832049294 TLQEQLEK Unmodified 987.52368 0.52367535 4506 Q9H307;A8K964;G3V5F0;G3V579 PNN Pinin yes no 0 0 0 4 0 1 46.439 46.483 2 0.00081708 12374 20230619_1883_Aki_TMTPro18x_K_F4 155.42 48.123 212270 141560 199980 199690 226510 244600 229720 227370 263590 273830 317440 290330 295840 260160 242270 316490 332730 297690 195960 130180 204560 197450 233280 243500 232540 234680 268770 274760 321940 293130 300190 272260 252690 315880 317240 283070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157820000 27149 4506 25502 51014 41136 41136 1 9606 Homo sapiens 0.029414463437205995 TLQEVTQLSQEAQR Unmodified 1629.8322 0.83221298 2908 E9KL44;H0YFD6;P40939;B4DRH6;A0A2R8Y4F5;A0A2R8YG21;A0A2R8Y688 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 4.5 0.5 1 1 53.369 53.415 2 1.2670999999999999E-21 15218 20230619_1885_Aki_TMTPro18x_K_F5 266.74 238.01 73807 64649 79148 82665 88397 98457 108530 99809 113590 112320 106810 118430 119980 103600 109440 129650 131950 144560 68318 59321 80144 82213 91594 98382 108370 102210 115190 113030 110580 119420 121570 108750 112830 130630 126120 137100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253940000 27150 2908 25503 51015;51016 41137;41138 41138 2 9606 Homo sapiens 0.04249015733171291 TLQGHSVIR Unmodified 1009.5669 0.56687757 1158 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A994J4D5 GATAD2B Transcriptional repressor p66-beta yes no 0 0 0 3.67 3.09 1 1 1 32.754 32.774 3 4.013E-09 7080 20230619_1880_Aki_TMTPro18x_K_F1 213.03 158.48 80556 60545 84741 85646 108570 111920 95631 109080 97297 91298 114090 126030 99858 91090 99436 83020 119710 107590 74482 55648 86086 84760 110450 111090 97290 111110 99671 94239 115730 125100 102400 94665 102140 85004 114250 101970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 70934000 27151 1158 25504 51017;51018;51019 41139;41140 41139 2 9606 Homo sapiens 0.062476809116560617 TLQIFNIEMK Oxidation (M) 1251.6533 0.65330932 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;J3KS13;A0A087WX41;P53675-2;P53675;F5H5N6 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 1 0 1 0 1 61.188 61.188 2 0.0053163 18953 20230619_1880_Aki_TMTPro18x_K_F1 85.716 59.777 57286 45226 51507 61960 58319 64154 56799 62566 65599 68718 66327 63952 63294 57782 67528 74605 63277 83997 52915 41545 52964 61201 60020 64659 57654 64178 66398 68965 67885 64950 64917 60706 68407 75197 60728 79605 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39017000 27152 826 25505 51020 41141 41141 490 1 9606 Homo sapiens 0.03754879631333097 TLQIFNIEMK Unmodified 1235.6584 0.6583947 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;J3KS13;A0A087WX41;P53675-2;P53675;F5H5N6 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 0 2 0 1 62.868 62.877 3 0.00011174 19872 20230619_1881_Aki_TMTPro18x_K_F2 127.83 75.833 100290 81420 98625 105410 80619 104070 105540 102900 119860 117960 108270 103690 119980 100640 109210 118720 109360 123060 92722 74740 100120 104460 85963 105270 105430 105620 120860 117990 112120 105810 121550 104910 111310 119230 104730 116790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1084800000 27153 826 25505 51021 41142 41142 1 9606 Homo sapiens 0.04999183493964665 TLQLDNNFEVK Unmodified 1319.6721 0.67213051 4685 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 yes yes 0 0 0 5.5 0.5 1 1 56.22 56.288 3 2.0626E-06 16369 20230619_1885_Aki_TMTPro18x_K_F5 153.54 113.62 277620 238450 281410 276870 282260 318300 302940 289180 366420 365620 358600 349930 389650 320090 311820 393000 366180 374150 256810 218600 285540 277070 293790 318110 306230 299490 369520 365010 369500 354970 392950 335080 321900 392480 349890 355540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1438100000 27154 4685 25506 51022;51023 41143;41144 41143 2 9606 Homo sapiens 0.025081325267592547 TLQLEYR Unmodified 921.49198 0.4919813 2180 Q99829;B0QZ18;F2Z2V0;A6PVH9;E7ENH5;Q59EI4;Q5JX58;Q5JX59;Q5JX45;Q5JX60;Q5JX44;Q5JX56;Q5JX52;Q5JX61;Q5JX55;Q5JX54;E7EV27;Q5JX57 CPNE1 Copine-1 yes no 0 0 0 6.5 0.5 1 1 45.779 45.865 2 0.053821 12040 20230619_1886_Aki_TMTPro18x_K_F6 84.498 21.288 370810 297090 348680 341730 394580 411290 401480 400190 444530 393000 416680 425700 444690 388010 437050 398810 456030 417960 342660 272410 356670 342500 406280 410480 405760 409370 449260 398660 430200 429340 452680 402030 445360 401860 435880 396920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203360000 27155 2180 25507 51024;51025 41145;41146 41145 2 9606 Homo sapiens 0.028094983804294316 TLQNAVR Unmodified 800.45045 0.45045083 2834 D3DWL9;Q10570;A0A087X101;Q9C0J6 CPSF1;P/cl.18 Cleavage and polyadenylation specificity factor subunit 1 yes no 0 0 0 7.5 0.5 1 1 34.499 34.533 2 0.060858 7324 20230619_1888_Aki_TMTPro18x_K_F8 81.32 47.507 55425 27922 59379 63006 73570 82158 60488 71855 82955 37490 49725 49038 40200 38391 57728 32588 57563 42566 51157 25891 60218 60921 74984 81304 62458 73172 81755 40164 52190 48911 42212 39632 58236 33490 54973 40379 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23612000 27156 2834 25508 51026;51027 41147 41147 1 9606 Homo sapiens 0.04224362411753191 TLQQFPGGSIDLQK Unmodified 1530.8042 0.80420731 2921 E9PIU8;J3KP84;E9PPG7;E9PRU6;F2Z2D6;E9PJS8;E9PLY6;H0Y5L2;Q9NTX5-5;Q9NTX5-6;Q9NTX5-2;Q9NTX5 ECHDC1 Ethylmalonyl-CoA decarboxylase yes no 0 0 0 1 0 1 57.545 57.545 3 0.00030519 17477 20230619_1880_Aki_TMTPro18x_K_F1 71.545 44.064 56060 44213 52266 55692 48185 62082 58566 62888 65449 64816 62523 72857 76051 63327 65838 72665 76332 83140 51796 40579 53382 55387 50734 62283 58681 64230 66195 65639 64952 73244 76705 66153 67744 73437 72979 78830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50342000 27157 2921 25509 51028 41148 41148 1 9606 Homo sapiens 0.060037375437104856 TLQQNAESR Unmodified 1045.5152 0.51523593 2340 B3KN59;B3KM36;O95816-2;O95816 BAG2 BAG family molecular chaperone regulator 2 yes no 0 0 0 2.5 0.5 1 1 30.401 30.494 2 0.00024875 5772 20230619_1882_Aki_TMTPro18x_K_F3 142.55 96.216 15828 6986.6 19867 22416 45213 44494 24056 31349 30480 16761 26588 31623 24332 23847 24469 10959 31903 28620 14625 6533.6 20231 21607 44350 42986 25691 32514 30502 18200 27399 31131 24941 24175 25209 12257 30430 27008 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16701000 27158 2340 25510 51029;51030 41149;41150 41150 2 9606 Homo sapiens -0.00570107572912093 TLQQQTFK Unmodified 992.5291 0.52909508 3653;450 A8K1J3;A0A024R7G8;P54725-3;P54725;A0A494C0B4;P54725-2;K7ENJ0;K7ELW1;P54727;B4DEA3;Q53F10;Q5W0S5 RAD23A;RAD23B UV excision repair protein RAD23 homolog A;UV excision repair protein RAD23 homolog B no no 0 0 0 3.67 3.09 1 1 1 44.237 44.27 2 6.6341E-11 11991 20230619_1880_Aki_TMTPro18x_K_F1 236.44 128.2 926320 718130 802170 880420 866670 907990 958740 969170 1184400 1055200 1188600 1176600 1142500 935600 1092700 1212600 1368900 1254100 855310 658960 826610 876290 897810 917660 968320 988200 1193400 1065500 1217200 1181100 1165200 987850 1127900 1216100 1306300 1191100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 820680000 27159 450;3653 25511 51031;51032;51033 41151;41152;41153 41151 3 9606 Homo sapiens 0.03253169926199462 TLQTISLLGYMK Unmodified 1366.753 0.75302336 2629 B7ZAX9;B4DZC0;O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 0 5 0 1 63.395 63.441 3 0.0027249 19500 20230619_1885_Aki_TMTPro18x_K_F5 72.496 54.184 93847 70583 81389 78811 82401 122850 91878 94590 123620 59817 60978 52280 58251 55014 88294 59492 71949 55702 86638 64718 83754 79501 86109 120150 93034 97616 121420 62251 65398 53576 61025 56875 88185 59603 68886 53006 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87596000 27160 2629 25512 51034 41154 41154 1 9606 Homo sapiens 0.08431697245282521 TLQTVGPSHAR Unmodified 1165.6204 0.62036971 789 A0A024RE13;Q9NRR4-2;Q9NRR4-4;Q9NRR4 RNASEN;DROSHA Ribonuclease 3 yes no 0 0 0 8 0 1 31.522 31.533 3 5.0416E-05 6157 20230619_1888_Aki_TMTPro18x_K_F8 110.08 95.82 10686 8960.9 13697 10096 14823 15297 13575 12285 18494 14492 15060 12157 19385 12595 14575 12576 19001 15616 9905.8 8213.5 13656 10179 15266 15010 13910 12814 18421 14473 15777 12468 19396 13004 15135 12815 18114 14812 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12306000 27161 789 25513 51035 41155 41155 1 9606 Homo sapiens 0.04418433623504825 TLRDYLQLLR Unmodified 1289.7456 0.74557022 3181 L0R6Q1 SLC35A4 yes yes 0 0 1 6 0 1 61.356 61.411 3 0.0024812 18741 20230619_1886_Aki_TMTPro18x_K_F6 86.879 53.758 149870 133730 148870 174160 161920 170980 196960 190420 205650 178120 176700 183640 188360 166880 187860 187730 191080 189210 138650 122730 151690 172510 168000 173580 196770 192900 207800 180860 183270 185610 191910 173770 191210 188430 182780 179710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295010000 27162 3181 25514 51036 41156 41156 1 9606 Homo sapiens 0.11228725759883673 TLRPALVGVVK Unmodified 1151.739 0.73902828 4543 Q9HAV7;B4DWV5 GRPEL1 GrpE protein homolog 1, mitochondrial;GrpE protein homolog yes no 0 0 1 6 0 1 48.631 48.71 3 0.00045885 13332 20230619_1886_Aki_TMTPro18x_K_F6 107.09 62.245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27163 4543 25515 51037 41157 41157 1 9606 Homo sapiens 0.16922832599175308 TLSAPQEER Unmodified 1029.5091 0.50908792 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3 PRRC2C Protein PRRC2C yes no 0 0 0 2 0 1 35.274 35.331 2 9.4888E-05 7799 20230619_1881_Aki_TMTPro18x_K_F2 156.46 82.201 84203 47031 82046 97375 100940 103380 99660 98188 113310 102320 118000 118270 114250 104780 91048 68877 127230 118430 77689 43519 83894 94167 103270 103900 100980 100800 114810 103700 120650 118770 115690 106680 94851 72659 121320 111990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89040000 27164 2894 25516 51038 41158 41158 1 9606 Homo sapiens -0.00448625804438052 TLSCVDRLEVGEVR Unmodified 1631.8301 0.83010449 495 Q14C86-6;Q14C86;Q14C86-2;Q14C86-5;Q14C86-4;A0A024R8A2;A0A024R862;F8W9S7;Q14C86-3;A0A024R875;B4DK42;C9IZ08;B4DGD8;H0Y7I9;H0Y4E7;B0QZ65 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 yes no 0 0 1 4 0 1 47.645 47.685 3 0.073561 12928 20230619_1883_Aki_TMTPro18x_K_F4 50.305 31.709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27165 495 25517 51039 41159 41159 1 9606 Homo sapiens 0.039462637236738374 TLSDDLDEAAK Unmodified 1176.551 0.55101232 4491 Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 yes no 0 0 0 2 0 1 50.953 50.998 2 3.0159E-07 14887 20230619_1881_Aki_TMTPro18x_K_F2 148.91 114.73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27166 4491 25518 51040 41160 41160 1 9606 Homo sapiens -0.030201149065760546 TLSDVEDQK Unmodified 1033.4928 0.49276916 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 4 0 1 41.596 41.639 4 0.090919 10222 20230619_1883_Aki_TMTPro18x_K_F4 44.753 11.344 21107 14214 16210 24872 26444 27526 25031 30609 34408 30185 35530 34464 36314 30694 28927 36535 43869 47123 19458 13107 17081 24250 26636 27688 25610 31026 34552 30662 36415 34683 36701 32113 30411 37183 41852 44633 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108130000 27167 4061 25519 51041 41161 41161 1 9606 Homo sapiens -0.022637517611883595 TLSDYNIQK Unmodified 1080.5451 0.54513908 1332;3737 Q5RKT7;A0A248RGE3;P62979;B2RDW1;Q8WYN9;Q96H31;Q5U5U6;Q9UFQ0;Q96C32;Q96MH4;L8B196;F5H747;J3QKN0;L8B4R0;A8K674;L8B4J3;L8B4Z6;L8B4M0;Q66K58;F5GXK7;Q5PY61;P0CG48;L8B4I8;B4DV12;J3QS39;J3QTR3;F5H6Q2;F5GYU3;F5H265;F5H2Z3;Q5UGI3;F5H388;Q59EM9;P0CG47;M0R1M6;Q49A90;M0R1V7;P62987;Q3MIH3;M0R2S1 RPS27A;HEL112;UBC;UBB;DKFZp434K0435;UbC;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Polyubiquitin-B;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40 no no 0 0 0 7 0.816 2 2 2 48.893 48.97 2;3 9.2775E-06 13462 20230619_1886_Aki_TMTPro18x_K_F6 175.12 120.51 1581900 1151300 1344900 1516100 1527000 2123200 1482500 1625200 2777800 1361400 1451600 1497200 1770400 1418500 1333100 1996200 1873000 2320400 1459900 1057500 1390100 1508200 1577400 2087800 1536400 1687100 2699200 1398000 1565000 1512800 1776700 1497400 1396900 2012300 1790000 2198800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5412300000 27168 1332;3737 25520 51042;51043;51044;51045;51046;51047 41162;41163;41164 41162 3 9606 Homo sapiens 0.008088313724101681 TLSEETR Unmodified 834.40831 0.40831125 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q96T67;Q5T9A4;Q5T9A4-3;H0Y2W2 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B yes no 0 0 0 1 0 1 32.074 32.074 2 0.001065 6804 20230619_1880_Aki_TMTPro18x_K_F1 173.11 135.47 34826 17187 41699 50896 78624 68432 60680 68738 50915 32580 64887 68080 48469 52490 66009 15336 69066 63705 32175 16029 42383 48777 78061 67836 61938 69219 52880 35942 65264 66923 50888 52692 66691 18890 66015 60014 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29345000 27169 4603 25521 51048 41165 41165 1 9606 Homo sapiens -0.015516577872745074 TLSEVEESISTLISQPN Unmodified 1845.9208 0.92075321 3983 Q53EN2;Q8N668;H7C377;Q53SJ8;H0Y7J4 COMMD1;C2orf5 COMM domain-containing protein 1 yes no 0 0 0 4.5 0.5 1 1 67.637 67.665 3 0.00038617 21248 20230619_1885_Aki_TMTPro18x_K_F5 73.156 61.18 2603.2 2416.9 2910.1 1905.6 1791.9 3491.7 3054.7 2968.8 2943.4 2395.1 2315.8 3095.1 2467.9 2077.6 2923.7 3557.1 2486.9 2930.2 2411.5 2208.4 2910.1 1991.7 1993.7 3396.1 3004.1 3052.3 2977.6 2472.8 2419.5 3075.9 2535.6 2253.1 2944.8 3513.6 2386.7 2788.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13037000 27170 3983 25522 51049;51050 41166 41166 1 9606 Homo sapiens 0.03162966462309669 TLSFGSDLNYATR Unmodified 1443.6994 0.69940789 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 4.5 3.5 1 1 55.189 55.223 2 3.5551E-15 16502 20230619_1880_Aki_TMTPro18x_K_F1 244 203.28 207210 157910 186330 212070 183120 211030 215160 214930 233330 272060 257860 252130 287360 225080 232830 298900 290460 294970 191360 145050 191140 209670 191440 213520 215700 220830 237890 271200 264620 255990 289660 237100 241260 298750 277380 280190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 369170000 27171 3152 25523 51051;51052 41167;41168 41167 2 9606 Homo sapiens -0.004693839328638205 TLSFSSDNIAVLSAAADSIK Unmodified 2009.0317 0.031700644 4064 Q5TDG3;Q9UNX4;B3KMW5 WDR3 WD repeat-containing protein 3 yes no 0 0 0 1 0 1 64.039 64.039 3 6.7946E-08 20145 20230619_1880_Aki_TMTPro18x_K_F1 107.72 96.11 7517.5 4943.4 5331.4 8174.5 5709 6514.9 7246.7 6266.8 7820.9 7680.5 5372.8 6667.1 9596.6 6361 8251.9 8207.4 9353.6 10469 6926 4555.1 5621.2 7958.8 5948.4 6704.2 7229.8 6464.3 7847 7657.2 5823.8 6798.9 9586.8 6683.8 8474.7 8342.9 8946.6 9915.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6200600 27172 4064 25524 51053 41169 41169 1 9606 Homo sapiens 0.06754606170397892 TLSFYFPPCGK Unmodified 1315.6271 0.62709457 902 A0A090N7X1;A0A090N7Y2;Q9UG63;Q9UG63-2 ABCF2 ATP-binding cassette sub-family F member 2 yes no 0 0 0 5 0 1 61.753 61.801 3 0.014245 18660 20230619_1885_Aki_TMTPro18x_K_F5 64.82 49.618 78181 57485 74947 77663 68351 81259 79023 83807 75696 81882 81863 73534 85963 68718 92449 104660 88150 83545 72222 52813 76326 76820 71835 81924 79005 85374 77592 82574 83863 74967 87878 72939 93726 103370 84351 79592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36070000 27173 902 25525 51054 41170 41170 1 9606 Homo sapiens -0.018093895401307236 TLSGMESYCVR Oxidation (M) 1317.5693 0.56932169 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 1 0 6.25 0.829 1 1 2 41.075 41.156 2 9.9893E-06 9804 20230619_1886_Aki_TMTPro18x_K_F6 145.46 99.781 706270 580160 641620 706030 739980 740350 736380 708850 790250 762050 827220 734230 824110 714120 701280 961740 871670 863610 652590 532200 658910 703130 760270 745610 744420 727910 803540 766600 846120 746830 835600 750230 726140 956180 832300 821330 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 772010000 27174 3622 25526 51055;51056;51057;51058 41171;41172;41173;41174 41173 2314 4 9606 Homo sapiens -0.07676019527889366 TLSGMESYCVR Unmodified 1301.5744 0.57440707 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 6.5 0.5 1 1 47.607 47.691 2 2.9270000000000003E-30 12479 20230619_1887_Aki_TMTPro18x_K_F7 269.99 239.82 560360 462240 526300 525600 396890 510650 512650 497460 546250 583140 515270 505150 638360 457810 500960 754540 602440 555460 517910 423750 535570 525620 426240 517190 511450 511520 553790 582310 535380 515210 640630 489650 518830 741530 575110 529860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1086600000 27175 3622 25526 51059;51060 41175;41176 41176 2 9606 Homo sapiens -0.06431715665257798 TLSHPQQMALLDQTK Unmodified 1709.8771 0.87705468 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 4.5 3.5 1 1 48.558 48.591 3;4 0.00087827 13824 20230619_1880_Aki_TMTPro18x_K_F1 76.82 61.433 46630 40878 46423 46774 49562 60121 53416 59754 66809 52326 54833 57048 61960 48762 58175 64574 62940 60917 43136 37468 47234 46945 51397 59760 54058 60839 66790 53444 57153 57446 62815 51418 59520 64414 60160 57906 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100590000 27176 1292 25527 51061;51062 41177;41178 41177 2 9606 Homo sapiens 0.05051123274802194 TLSHPQQMALLDQTK Oxidation (M) 1725.872 0.8719693 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 1 0 8 0 1 43.469 43.479 3 0.00038172 10905 20230619_1888_Aki_TMTPro18x_K_F8 85.909 67.992 17239 14759 19423 21285 22173 24631 20367 21012 26872 20139 23249 26917 22439 17116 26140 22980 20149 26894 15962 13562 19600 20992 22771 24563 20844 21697 26842 20614 24022 26676 23084 18298 26170 23226 19383 25477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19902000 27177 1292 25527 51063 41179 41179 817 1 9606 Homo sapiens 0.03806819412193363 TLSPGDSFSTFDTPYCR Unmodified 1949.8465 0.84654241 4576 V9HW91;Q9NQR4;H7C579 HEL-S-8a;NIT2 Omega-amidase NIT2 yes no 0 0 0 6.5 0.5 1 1 58.083 58.144 3 3.0762E-38 17317 20230619_1886_Aki_TMTPro18x_K_F6 249.6 241.32 75048 70122 74184 86709 79136 97458 82579 80009 86572 91888 87898 93033 100660 87562 92888 100280 97119 109180 69450 64307 75592 86315 81974 97314 83201 83283 88093 92275 90729 94193 101970 91188 94869 101050 92966 103560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 231920000 27178 4576 25528 51064;51065 41180;41181 41180 2 9606 Homo sapiens -0.0903869990088424 TLSPTGNISSAPK Unmodified 1271.6721 0.67213051 1255 O94901-9;A0A146IHP0;E9PHI4;A7MCZ7;O94901;O94901-5;H0Y742;A4D2Q0;O94901-6;H0Y6N5;B4E278;A0A8I5G938;Q5S4N2 SUN1;UNC84A SUN domain-containing protein 1 yes no 0 0 0 1 0 1 45.562 45.562 3 0.02873 12546 20230619_1880_Aki_TMTPro18x_K_F1 51.829 25.043 33791 25301 30222 31243 32889 40259 39766 36951 45878 34469 46299 49765 43434 37650 42096 42228 48908 43816 31202 23221 31055 31183 34179 39936 39873 37921 46344 35452 47382 49415 44367 39462 43203 42457 46693 41618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25467000 27179 1255 25529 51066 41182 41182 1 9606 Homo sapiens 0.04716132526777983 TLSRPSETCNETTK Unmodified 1622.757 0.75699912 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;Q6ZME7;H0Y827;Q96AY3-2 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 0 1 5.5 0.5 1 1 35.178 35.249 3 7.4611E-07 7670 20230619_1885_Aki_TMTPro18x_K_F5 110.35 80.659 73299 52944 66357 57790 88696 90505 87381 87753 115450 85409 78854 70432 102590 74461 63868 109620 110370 86532 67675 48543 68270 58439 90328 88998 88998 89710 114530 86069 83555 72425 102090 78576 68434 108160 104990 82521 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 54347000 27180 167 25530 51067;51068 41183;41184 41183 2 9606 Homo sapiens -0.029469097896026142 TLSSPSNRPSGETSVPPPPAVGR Unmodified 2289.1713 0.17132244 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;A0A024QZ91;A0A024QZC0 ATXN2L Ataxin-2-like protein yes no 0 0 1 4.5 3.5 1 1 41.057 41.054 3 6.3126E-26 10506 20230619_1880_Aki_TMTPro18x_K_F1 177.29 153.96 52712 39668 45026 48756 39624 53062 48493 48463 56660 54066 55237 53564 56694 50883 58839 66031 63485 63435 48658 36405 46330 48546 41927 53202 48644 49982 57198 54340 56807 54342 57945 53364 60090 65945 60697 60278 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 354620000 27181 4285 25531 51069;51070 41185;41186 41185 2 9606 Homo sapiens 0.07830363507628135 TLSSVQNEVQEALQR Unmodified 1700.8693 0.86932676 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 6.5 0.5 1 1 60.965 61.015 3 3.2947E-14 18534 20230619_1886_Aki_TMTPro18x_K_F6 183.23 154.17 121470 105290 117340 134380 118550 142380 128160 124660 136860 144400 142670 149390 152930 138420 140800 170540 146490 171090 112330 96611 119670 133390 123400 142930 128960 129150 139250 145040 146620 151070 155230 144810 143880 170800 140280 162410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 250580000 27182 3440 25532 51071;51072 41187;41188 41187 2 9606 Homo sapiens 0.046926872788844776 TLSVSPSVERPDYR Unmodified 1604.8158 0.81583463 1636 A0A7P0TAV2;A0A6Q8PGK3;A0A7P0T9G7;B7ZLW8;Q99707;B4DST3;A0A7P0TAJ0;Q99707-2;A0A7P0TA06;B4DFV0;A0A494C064;A0A494C1A2 MTR Methionine synthase yes no 0 0 1 7 0 1 42.62 42.695 3 6.6247999999999995E-22 10335 20230619_1887_Aki_TMTPro18x_K_F7 175.31 151.84 104560 79213 89849 95509 114570 133110 118700 127960 147090 131750 128190 126680 142750 119520 122400 153970 149540 131090 96525 72681 92921 95616 117290 131600 120310 131100 147490 132830 133020 128650 144290 125320 126490 152810 142690 124820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59733000 27183 1636 25533 51073 41189 41189 1 9606 Homo sapiens 0.0376193456704641 TLTAEEAEEEWER Unmodified 1591.7002 0.70019575 3547 Q6IBK5;P35269;M0R0R9 GTF2F1 General transcription factor IIF subunit 1 yes no 0 0 0 1 0 1 52.318 52.318 2 1.0954E-26 15305 20230619_1880_Aki_TMTPro18x_K_F1 227.2 211.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27184 3547 25534 51074 41190 41190 1 9606 Homo sapiens -0.07198634074461552 TLTDEELADWK Unmodified 1319.6245 0.62451161 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2YQI1;A0A7I2V4R2;B7ZA24;P40763-3;P40763-2;A0A7I2YQD2;A0A7I2V4R3;A0A7I2V395;A0A7I2V2G1;A0A7I2V552;A0A7I2V4F6;A0A7I2V2T1;B5BTZ6 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 0 0 2 0 1 59.158 59.171 3 0.0014034 18287 20230619_1881_Aki_TMTPro18x_K_F2 86.923 71.951 37900 26733 32870 35117 30947 44866 41161 35709 44599 41483 42087 45153 47648 41411 40689 49125 45148 46714 34976 24558 33812 34890 32667 44385 41000 37282 45135 41747 43563 45544 48133 43237 41791 49086 43165 44389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9484100 27185 1660 25535 51075 41191 41191 1 9606 Homo sapiens -0.02251566464087773 TLTDEVNSPDSDRR Unmodified 1603.7438 0.7437919 645 Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 0 0 1 1.5 0.5 1 1 36.359 36.388 3 3.5169E-100 8236 20230619_1881_Aki_TMTPro18x_K_F2 324.48 292.56 119730 81027 105660 120960 131730 130950 134300 124620 147540 128840 162360 167940 154770 132620 159970 166240 191300 176210 110480 74556 108970 118950 134750 131510 135650 127920 150050 131190 165620 167570 158480 139720 164330 167050 182620 167310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 207810000 27186 645 25536 51076;51077 41192;41193 41193 2 9606 Homo sapiens -0.03393024577349024 TLTGTAALTVQSQEDNLR Unmodified 1916.9803 0.98033378 1222 A0A140VK27;P09960;P09960-2;Q59ES1;B4DEH5 LTA4H Leukotriene A-4 hydrolase yes no 0 0 0 5.5 0.5 1 1 52.295 52.37 3 2.1323999999999999E-38 14776 20230619_1885_Aki_TMTPro18x_K_F5 243.95 218.08 105140 83693 100440 113150 111960 134280 116520 118170 144010 133530 148050 133880 145150 126890 124640 134400 148930 136250 97168 76868 102690 112080 115640 133760 118080 122240 145280 134190 151450 135700 147290 131510 128490 135030 142170 129440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 368240000 27187 1222 25537 51078;51079 41194;41195 41194 2 9606 Homo sapiens 0.058522821962924354 TLTGVLPER Unmodified 984.5604 0.56039521 4282 Q8WVY7 UBLCP1 Ubiquitin-like domain-containing CTD phosphatase 1 yes yes 0 0 0 6.5 0.5 1 1 47.851 47.935 2 0.061523 12639 20230619_1887_Aki_TMTPro18x_K_F7 65.347 50.829 165030 130920 144860 173830 159800 187460 180920 182770 199330 189960 191320 205890 218710 179980 182920 236580 213990 211820 152420 120220 149260 172140 165500 188360 181750 187250 201740 192080 197960 207460 220640 189480 188650 235290 204430 201450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162630000 27188 4282 25538 51080;51081 41196 41196 1 9606 Homo sapiens 0.06749742960278127 TLTIGSAGK Unmodified 846.48108 0.48108226 1545 A8K563;A0A494C066;B7Z4W5;Q16773-2;Q16773;Q5T278 CCBL1 Kynurenine--oxoglutarate transaminase 1 yes no 0 0 0 1.5 0.5 1 1 45.486 45.527 2 7.4419E-06 12346 20230619_1881_Aki_TMTPro18x_K_F2 178.94 0 225030 148350 228500 230560 267150 273860 254450 253560 312560 256420 318330 309920 298910 259700 290650 227330 371680 332290 207850 136590 232390 226560 273990 273120 259120 260530 315120 260740 325430 310410 305410 267950 299780 235070 354560 314640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 151560000 27189 1545 25539 51082;51083 41197;41198 41198 2 9606 Homo sapiens 0.05170096006145286 TLTLAAFSEAMGK Oxidation (M) 1354.6803 0.68025235 4816 yes no 0 1 0 5.67 0.471 1 2 35.404 35.47 4 0.050993 7761 20230619_1886_Aki_TMTPro18x_K_F6 52.555 21.124 + 265830 218090 242780 242230 310070 321530 326620 306650 385050 316860 363820 337310 375710 323040 318090 369270 389890 345400 245640 199890 249570 243790 317130 318870 330030 314540 387880 320500 374560 341230 380430 336070 328690 368890 372040 328480 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4077699999.9999995 27190 4816 25540 51084;51085;51086 41199 41199 2923 1 9606 Homo sapiens 0.01709943451851359 TLTLVDTGIGMTK Unmodified 1348.7272 0.72720254 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;O14942 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 0 3.67 3.09 1 1 1 60.733 60.747 2;3 1.0418E-27 18792 20230619_1880_Aki_TMTPro18x_K_F1 302.33 0 561670 471790 545180 581250 472820 661910 588540 586080 669890 759740 659950 696170 778050 642830 663220 822000 702380 791380 519320 432800 554500 579020 501160 661140 589360 608570 678180 756520 682970 707680 784760 674480 679510 820970 672270 751650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1505999999.9999998 27191 751 25541 51087;51088;51089 41200;41201;41202 41200 3 9606 Homo sapiens 0.06678803003001121 TLTPDQWAR Unmodified 1086.5458 0.54580778 4509 Q9H3K6;A0A499FJE1 BOLA2 BolA-like protein 2 yes no 0 0 0 6.5 0.5 1 1 47.744 47.828 2 0.00082124 12959 20230619_1886_Aki_TMTPro18x_K_F6 122.19 100.04 683280 511750 630620 710620 634430 805380 743720 725300 829860 831080 831940 885450 944610 794630 802370 910630 909690 943540 631080 470270 645700 702250 662610 804930 746220 749420 840880 835990 858720 893170 953740 828890 824920 914820 869580 895710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 371250000 27192 4509 25542 51090;51091 41203;41204 41203 2 9606 Homo sapiens 0.005996708121301708 TLTPGGHAEHDGQPYCHK Unmodified 2003.8908 0.89080726 3639 Q53FN1;P52943;H0YFA4;P52943-2;H0YHD8 CRIP2 Cysteine-rich protein 2 yes no 0 0 0 6.5 1.5 1 1 32.751 32.792 5 2.2065E-09 6700 20230619_1885_Aki_TMTPro18x_K_F5 94.922 84.454 22518 17394 21335 23895 24176 26773 33066 34606 26914 31675 30792 36119 33887 28805 28199 29785 51743 45809 20806 15981 21839 23639 25103 27023 32633 34720 27945 32272 31585 36189 34245 30033 30076 30803 49239 43361 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22082000 27193 3639 25543 51092;51093 41205;41206 41205 2 9606 Homo sapiens -0.0709825096403165 TLTPISAAYAR Unmodified 1162.6346 0.63462279 3534;2560 B4DP06;V9HWH7;P31939;B2R7P8;P31939-2 HEL-S-70p;ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 0 2.5 0.5 1 1 48.357 48.432 2 0.0001408 13423 20230619_1882_Aki_TMTPro18x_K_F3 162.8 134.63 498200 449240 496840 526120 471100 600320 533800 555750 614960 387460 387840 390370 364230 327170 487060 395180 419880 433820 460950 411820 504700 526050 493760 600200 537110 566330 612110 401080 407920 394170 378510 343170 488900 398480 402480 411590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 805700000 27194 2560;3534 25544 51094;51095 41207;41208 41208 2 9606 Homo sapiens 0.05981086051792772 TLTPSYYR Unmodified 999.50255 0.50254598 4557 Q9NP72;Q9NP72-2;B7Z5V3;B7Z4P9;A0A804HIB9;A0A8C8NLQ3;H0Y6T8 RAB18 Ras-related protein Rab-18 yes no 0 0 0 1.5 0.5 1 1 42.752 42.752 2 0.00047701 11103 20230619_1881_Aki_TMTPro18x_K_F2 128.37 39.462 88655 80246 77544 73810 99694 138000 99593 98430 138710 38475 41610 43394 40716 34706 59160 34684 50569 41114 81946 73409 80050 75946 102120 133720 101530 101650 134900 42479 47274 43568 42506 36092 59217 35298 48402 39017 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43220000 27195 4557 25545 51096;51097 41209;41210 41210 2 9606 Homo sapiens 0.00277481034856919 TLTSSGQVTLGDACSASTSR Unmodified 1997.9324 0.9323973 4170;3047 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;H0YHT2;Q68D13;H0YI78 KIF21A;DKFZp779C159 Kinesin-like protein KIF21A no no 0 0 0 7 0 1 46.08 46.168 3 9.5759E-37 11804 20230619_1887_Aki_TMTPro18x_K_F7 228.58 219.01 34707 27648 33360 30021 33807 45180 33178 30612 53785 30804 33488 33615 29868 29198 32904 36369 33581 35123 32077 25338 33993 30327 35172 44189 34110 32288 52737 31278 35156 33859 30782 30622 33464 36354 32134 33368 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196090000 27196 4170;3047 25546 51098 41211 41211 1 9606 Homo sapiens -0.026651597860109177 TLTTMAPYLSTEDVPLAR Unmodified 1978.0081 0.0081284304 2382 Q8TEX9-2;Q8TEX9;B3KQ33;Q59FI4;B3KPS9;B3KT38;B3KTB3;D3DS63;H0YN14 IPO4 Importin-4 yes no 0 0 0 8 0 1 62.341 62.366 3 0.042708 18800 20230619_1888_Aki_TMTPro18x_K_F8 43.946 31.78 147890 124670 139170 124220 111270 125700 110140 115500 168090 108330 92547 108990 115580 112210 117600 143970 136120 149560 136710 114150 141550 125630 117920 126840 112960 118530 164830 110050 99650 110750 117500 117280 120720 144390 130160 141940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135580000 27197 2382 25547 51099 41212 41212 1 9606 Homo sapiens 0.05824469132176091 TLTTVQGIADDYDK Unmodified 1538.7464 0.74641766 3166 Q6IAV3;K7EM18;P41567;Q6FG85;Q53F41;O60739 SUI1;EIF1;GC20;EIF1B Eukaryotic translation initiation factor 1;Eukaryotic translation initiation factor 1b yes no 0 0 0 4.67 0.943 2 1 56.614 56.619 3 7.6038E-07 16905 20230619_1883_Aki_TMTPro18x_K_F4 130.2 118.22 193670 154230 209390 208140 196130 227450 213380 199630 227420 239400 217030 221150 232540 204440 207380 261720 240330 239870 179170 141650 211200 205990 205260 227840 214630 206980 230640 239270 223880 224780 235730 214430 213440 260710 229630 228060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 339830000 27198 3166 25548 51100;51101;51102 41213;41214;41215 41213 3 9606 Homo sapiens -0.0014056917236757727 TLTVEGCEYK Unmodified 1198.554 0.5539892 3002 G1UI18;Q14997;Q14997-3;Q14997-2 PSME4 Proteasome activator complex subunit 4 yes no 0 0 0 4 0 1 47.816 47.856 3 0.04218 13009 20230619_1883_Aki_TMTPro18x_K_F4 57.149 43.243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27199 3002 25549 51103 41216 41216 1 9606 Homo sapiens -0.0373456305342188 TLTVHEK Unmodified 826.45487 0.45486751 1896 A0MNN4;Q2TAY7;Q2TAY7-2 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes no 0 0 0 6 0 1 35.807 35.867 3 0.0066603 7926 20230619_1886_Aki_TMTPro18x_K_F6 95.741 45.11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27200 1896 25550 51104 41217 41217 1 9606 Homo sapiens 0.034698268346687655 TLVAVKPDGVQR Unmodified 1281.7405 0.74048484 2955 H0Y6J0;Q4TT34;F2Z2X0;O00746;A0A087WVT9 NME4 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase, mitochondrial yes no 0 0 1 1.5 0.5 1 1 43.587 43.67 3 1.5301E-05 11500 20230619_1881_Aki_TMTPro18x_K_F2 133.88 94.331 307550 249650 277690 312640 295400 344770 309330 283430 326580 422690 474690 428080 423780 384030 384320 475130 520040 469140 284140 229080 285070 310880 306010 344790 311740 297620 337920 419790 477460 433030 432480 402310 399480 475390 495910 445840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 388290000 27201 2955 25551 51105;51106 41218;41219 41219 2 9606 Homo sapiens 0.11088421897261469 TLVDNAYSCDPR Unmodified 1409.6245 0.62452839 4403 Q99543-2;Q99543;H7C3L7 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 44.261 44.305 2;3 0.0018464 11429 20230619_1883_Aki_TMTPro18x_K_F4 64.224 55.495 41243 39346 41830 43452 57364 55321 52879 50556 71582 41171 52248 51299 49028 39591 45544 50278 57122 49337 38180 36042 42681 43712 58200 54961 54123 51732 70984 42481 54362 51252 49984 41789 47035 50290 54488 46899 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47065000 27202 4403 25552 51107;51108 41220;41221 41221 2 9606 Homo sapiens -0.06389889735760335 TLVEDLFADK Unmodified 1149.5918 0.59175492 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 5 0.816 1 1 1 63.446 63.48 3 0.00037485 19506 20230619_1885_Aki_TMTPro18x_K_F5 108.93 67.481 128740 121200 139210 147890 139850 160050 149090 142090 163300 161460 168250 162470 170740 155240 155950 198520 166840 181250 119240 111130 140610 147320 145480 160510 150250 146960 165780 162210 172460 164740 173550 162590 159690 197710 159630 172280 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 415040000 27203 3312 25553 51109;51110;51111 41222;41223;41224 41223 3 9606 Homo sapiens 0.022942712036865487 TLVEHSGR Unmodified 897.46683 0.46682918 1101 B4DH70;E5RGC1;Q68DS0;B2R8L3;B7Z3H4;A0A0S2Z4P6;A0A0S2Z507;Q9UKB1-2;Q9UKB1-3;Q9UKB1;Q9Y297-2;Q9Y297 FBXW11;DKFZp781N011;BTRC F-box/WD repeat-containing protein 11;F-box/WD repeat-containing protein 1A yes no 0 0 0 3.67 0.471 1 2 24.535 24.606 3 0.0039785 3891 20230619_1883_Aki_TMTPro18x_K_F4 87.308 53.055 16206 11599 18233 22314 24181 26378 23978 23382 25931 21828 25691 24886 23258 24057 23387 16100 25623 25801 14982 10682 18454 21602 24631 26270 24140 24028 26281 22249 26261 24998 23849 24418 23860 16879 24475 24403 3 3 3 3 4 3 3 3 4 4 4 3 4 4 4 4 3 4 1262600 27204 1101 25554 51112;51113;51114 41225;41226;41227;41228;41229 41226 5 9606 Homo sapiens 0.013994435778613479 TLVEHVGMK Oxidation (M) 1028.5325 0.5324659 3932 Q15397;B2RDG4 KIAA0020 Pumilio domain-containing protein KIAA0020 yes no 0 1 0 7 0 1 39.665 39.73 3 0.018625 9141 20230619_1887_Aki_TMTPro18x_K_F7 61.353 53.198 177060 106270 167350 177780 167840 186430 210420 180530 197550 195200 195520 174120 190060 147120 177630 186290 165260 157210 163370 97982 170910 173670 175380 187620 209230 185320 201900 195840 200350 176860 193430 154770 180210 184950 158180 149660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143050000 27205 3932 25555 51115 41230 41230 2608 1 9606 Homo sapiens 0.01934096708555444 TLVEHVGMK Unmodified 1012.5376 0.53755128 3932 Q15397;B2RDG4 KIAA0020 Pumilio domain-containing protein KIAA0020 yes no 0 0 0 7.5 0.5 1 1 43.238 43.283 3 0.00020588 10809 20230619_1888_Aki_TMTPro18x_K_F8 125.48 96.393 170750 144000 150670 158330 150660 158610 168480 158570 213860 152450 144020 149740 169030 139720 149870 179320 172170 156770 157760 131960 154760 158800 157030 160440 170190 161890 212370 154460 152180 151850 170850 146540 154120 178230 164410 149200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117590000 27206 3932 25555 51116;51117 41231;41232 41232 2 9606 Homo sapiens 0.03178400571164275 TLVKSQDER Unmodified 1074.5669 0.56693715 1875 A0A994J595;P54289-4;P54289-5;P54289;Q9UIU0;P54289-3;P54289-2;A0A994J5M8;H0Y715;Q9UDQ3 CACNA2D1;WUGSC:H_DJ0560O14.1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 1 2 0 1 56.306 56.325 3 0.060746 17187 20230619_1881_Aki_TMTPro18x_K_F2 41.448 7.0616 14223 13148 15342 16764 14445 17063 15039 13569 19706 14980 14676 14940 15829 13540 16097 17349 17226 18067 13171 12062 15487 16631 15105 17150 15272 14153 19600 15078 15350 15125 16136 14216 16433 17409 16477 17149 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10329000 27207 1875 25556 51118 41233 41233 1 9606 Homo sapiens 0.03263636120982483 TLVLLDNLNVR Unmodified 1268.7452 0.74523587 619 A0A0C4DGS1;A0A024RAD5;P39656;P39656-3;U3KQ84;P39656-2 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 0 2 0 1 62.02 62.03 2 7.5034E-05 19511 20230619_1881_Aki_TMTPro18x_K_F2 158.85 126.63 505060 431870 459140 507440 495740 537120 578940 576640 600430 556890 613150 694140 646490 555470 670150 680250 611460 732380 466800 395980 471120 506760 514190 541870 579580 585910 610850 567940 630730 693670 659810 584100 677910 684490 586450 694620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 668360000 27208 619 25557 51119 41234 41234 1 9606 Homo sapiens 0.1216130604002501 TLVLLGAHGVGR Unmodified 1191.7088 0.70879078 1370 A0A2U3TZN6;A0A2U3TZM1;O14936;O14936-2;O14936-6;O14936-3;O14936-4;A0A2R8YEK3;Q5JS79;B7ZKY2;A0A2U3TZM4;A0A7I2RJN6;A0A2R8YE77;A0A2R8YFN5;A0A2R8Y6F8;O14936-5 CASK Peripheral plasma membrane protein CASK yes no 0 0 0 5 0 1 48.264 48.341 3 4.4603E-12 13032 20230619_1885_Aki_TMTPro18x_K_F5 134.3 83.601 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27209 1370 25558 51120 41235 41235 1 9606 Homo sapiens 0.12060473933979665 TLVLLMGK Oxidation (M) 889.53067 0.53067499 3400 P07737;K7EJ44;CON__P02584 PFN1 Profilin-1 yes no 0 1 0 3.8 0.748 2 2 1 56.11 56.141 2;3 0.0080096 16832 20230619_1882_Aki_TMTPro18x_K_F3 73.931 56.605 658560 590770 614690 658340 926760 728560 720270 636150 794860 322450 321890 181690 219330 203730 494770 336760 264530 182200 608990 541310 632590 660330 930210 730230 739980 648260 785470 339430 347690 192560 240360 216270 484690 328170 254760 175000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1250900000 27210 3400 25559 51121;51122;51123;51124;51125 41236;41237 41236 2013 2 9606 Homo sapiens 0.0814908769059457 TLVLLMGK Unmodified 873.53576 0.53576037 3400 P07737;K7EJ44;CON__P02584 PFN1 Profilin-1 yes no 0 0 0 5 0.707 1 2 1 62.045 62.094 2;3 0.0036592 18835 20230619_1885_Aki_TMTPro18x_K_F5 133.81 103.14 1459100 1276600 1228400 1283800 1219000 1583800 1279900 1367900 1542300 738750 592190 377800 516380 409410 1102900 634480 603270 364390 1348000 1168800 1267400 1300500 1271500 1573600 1295000 1395100 1516200 771000 648830 402350 557160 433240 1080900 620450 580380 349840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2819300000 27211 3400 25559 51126;51127;51128;51129 41238;41239;41240 41239 3 9606 Homo sapiens 0.0939339155321477 TLVLSNLSYSATEETLQEVFEK Unmodified 2500.2585 0.2584657 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 0 7 0.816 1 1 1 66.086 66.115 3 9.3734E-26 20823 20230619_1886_Aki_TMTPro18x_K_F6 194.24 179.93 18388 10497 16699 18824 14052 14056 18019 13879 15332 18501 19268 18834 22235 18671 16471 21369 18227 20033 16958 9690.7 17075 18249 14894 14566 17855 14340 15943 18457 19707 19103 22320 19407 16975 21343 17435 19035 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99384000 27212 1658 25560 51130;51131;51132 41241;41242 41241 2 9606 Homo sapiens 0.06834680147994732 TLVNKEEPPK Unmodified 1153.6343 0.63428844 4336 Q96DI9;Q9BY77;F6VRR5;B4E0L0;Q9BY77-2;F8WCX5;Q659C6;B4DMM2 POLDIP3;DKFZp434G0310 Polymerase delta-interacting protein 3 yes no 0 0 1 7 0 1 41.904 41.975 3 0.00053253 10085 20230619_1887_Aki_TMTPro18x_K_F7 107.95 90.721 59597 52606 61166 57605 73024 76990 73385 66699 77597 67774 80750 68371 67158 50885 77960 56114 63877 51991 55147 48197 62162 58043 74880 76171 74092 68883 78889 68470 82048 68806 69417 53363 78182 56160 61171 49469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46293000 27213 4336 25561 51133 41243 41243 1 9606 Homo sapiens 0.06361666331940796 TLVNPANVTFK Unmodified 1202.6659 0.66592292 890 A0A087X1K9;E5RGR0;Q6IAQ1;B4DJV9;O75608-2;O75608;B4DP64 LYPLA1 Acyl-protein thioesterase 1 yes no 0 0 0 3.5 0.5 1 1 56.186 56.208 3 6.9742E-05 16881 20230619_1882_Aki_TMTPro18x_K_F3 107.34 75.123 220280 197390 212350 241320 186980 236360 237260 230800 277440 272530 253120 246940 284520 254940 243990 324880 252420 273070 203750 181020 216210 240020 197870 239210 237560 237340 279470 272480 262170 252250 287560 266300 249750 322230 241580 259840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 275760000 27214 890 25562 51134;51135 41244 41244 1 9606 Homo sapiens 0.07269659085864077 TLVSVTK Unmodified 746.4538 0.45380487 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7;Q58FG1 EL52;HSP90AA1;HSP90AA4P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A4 yes no 0 0 0 2 0.816 1 1 1 46.452 46.505 2 0.0039898 12926 20230619_1880_Aki_TMTPro18x_K_F1 151.29 50.55 2603300 1865300 2145100 2462100 2980300 3019300 2751200 2657200 3599900 3092400 3246600 3122300 2282400 2854400 2436700 4220800 2039900 3096400 2401800 1713500 2231300 2443800 3023900 3003000 2812300 2751100 3603500 3104700 3304300 3162300 2373300 3019200 2464100 4151300 1962900 2949000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8309499999.999999 27215 3177 25563 51136;51137;51138 41245;41246 41245 2 9606 Homo sapiens 0.07043612465770366 TLVTGALRPR Unmodified 1082.656 0.65602693 4457 Q9BWH6;Q9BWH6-3 RPAP1 RNA polymerase II-associated protein 1 yes no 0 0 1 7 0 1 40.537 40.605 3 0.0033102 9511 20230619_1887_Aki_TMTPro18x_K_F7 81.865 65.611 106510 84207 96373 103690 121440 109780 111730 105110 137020 95141 102880 81477 97174 82402 104110 99406 76855 86133 98392 77267 99128 103200 123760 110510 113960 107460 136680 96375 106790 83478 99660 85865 104220 98907 73862 81916 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33795000 27216 4457 25564 51139 41247 41247 1 9606 Homo sapiens 0.1180051587118669 TLVVHEK Unmodified 824.4756 0.47560295 3372 V9HWC9;P00441;H7BYH4 HEL-S-44;SOD1 Superoxide dismutase [Cu-Zn] yes no 0 0 0 6.5 1.12 1 1 1 1 37.313 37.366 3 0.0032141 8464 20230619_1886_Aki_TMTPro18x_K_F6 116.73 75.223 1266800 811230 1046600 1316400 1952100 1654000 1427900 1224300 2044100 1616000 2124100 2122100 1922300 1789200 1650600 1208600 2378200 1959800 1168100 747410 1096000 1290800 1939800 1637800 1488100 1291800 2049200 1629200 2166000 2118200 1957000 1826100 1720600 1267800 2265500 1855000 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 8416999999.999999 27217 3372 25565 51140;51141;51142;51143 41248;41249;41250;41251 41249 4 9606 Homo sapiens 0.05634417214332643 TLWEDPGIQECYDR Unmodified 1780.7726 0.77264919 3525 Q59FM5;P29992 GNA11 Guanine nucleotide-binding protein subunit alpha-11 yes no 0 0 0 2 0 1 56.656 56.672 3 0.00040523 17277 20230619_1881_Aki_TMTPro18x_K_F2 91.076 85.797 75593 65780 73237 77346 56724 74027 77219 53598 86665 74419 94026 76076 102080 78815 79734 84591 79259 94538 69909 60309 74385 77111 60875 74639 76935 56838 87967 74227 96330 77326 102790 81577 81478 85459 75945 89631 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11230000 27218 3525 25566 51144 41252 41252 1 9606 Homo sapiens -0.08650623272569646 TLWSLVAFPK Unmodified 1160.6594 0.65938097 4313 Q93034;L0L6C1 CUL5 Cullin-5 yes no 0 0 0 6 0 1 64.578 64.623 3 0.0025848 20197 20230619_1886_Aki_TMTPro18x_K_F6 80.688 57.669 22298 16217 20986 25400 19112 23161 20144 20761 26375 26396 23632 29579 23725 25972 25627 28313 29395 32107 20594 14926 21425 24848 20059 23522 20452 21537 26420 26476 24427 29734 24349 27011 26250 28620 28107 30445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170760000 27219 4313 25567 51145 41253 41253 1 9606 Homo sapiens 0.08547765925140993 TLYDESCSK Unmodified 1101.4648 0.46483985 1837 Q9P1R6;A0A8V8TNA9;Q969U7-2;Q969U7;A0A8V8TMV1;K7ENR6;A0A8V8TP80 PSMG2 Proteasome assembly chaperone 2 yes no 0 0 0 3.5 0.5 1 1 43.071 43.126 2 6.5887E-05 10892 20230619_1883_Aki_TMTPro18x_K_F4 177.36 150.11 96970 70232 90028 99774 110070 110870 112100 109870 128260 122860 134770 138290 143570 108620 108460 103690 163400 137660 89548 64566 92384 98447 112740 111240 113400 112670 130010 123940 138330 138590 144530 112870 113890 106200 155630 130480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52537000 27220 1837 25568 51146;51147 41254;41255 41255 2 9606 Homo sapiens -0.08183398012920406 TLYGFGG Unmodified 713.33844 0.33844077 2211 B2R4R0;P62805;Q0VAS5 HIST1H4H;HIST1H4A Histone H4 yes no 0 0 0 5.09 2.19 1 1 1 1 1 2 3 1 58.717 58.756 1;2 0.0010079 17199 20230619_1887_Aki_TMTPro18x_K_F7 143.88 143.88 5751000 4997800 5017100 4819700 4833800 5712100 5529800 4775600 5462900 4547000 4644000 3995700 4713900 3690200 5383500 4175300 4616700 3853900 5314300 4574300 5154100 4897400 5057700 5689300 5532300 4939600 5534200 4593600 4804800 4073000 4837700 3843900 5413100 4174600 4419300 3666700 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 94761000000 27221 2211 25569 51148;51149;51150;51151;51152;51153;51154;51155;51156;51157;51158 41256;41257;41258;41259;41260;41261;41262;41263;41264;41265 41262 10 9606 Homo sapiens -0.029694916652260872 TLYLADTFPTNFEDPEGAK Unmodified 2128.0001 6.61646E-05 2804 CON__Q9N2I2 yes yes 0 0 0 5 0 1 63.265 63.311 3 0.013109 19435 20230619_1885_Aki_TMTPro18x_K_F5 54.253 46.977 + 36708 27063 31025 39089 35043 44600 37826 36148 47045 51092 73447 91535 55240 56657 72484 61710 68592 92997 33878 24882 32106 38527 36232 44463 38276 37945 48416 52039 73465 89824 57823 59828 73140 63711 65835 87908 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111550000 27222 2804 25570 51159 41266 41266 1 -0.018813865835909382 TLYVEEVVPNVIEPSFGLGR Unmodified 2217.1681 0.16813455 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4;A0A6Q8PHI7 GARS Glycine--tRNA ligase yes no 0 0 0 7 0 1 64.575 64.605 2 6.7886E-30 19939 20230619_1887_Aki_TMTPro18x_K_F7 280.23 249.79 33599 30334 30717 31200 28621 28262 31418 32412 33151 41626 45122 50042 48358 39995 52013 55890 49156 64046 31066 27774 31407 31426 29948 28927 31594 33077 34187 41802 45924 50083 49409 42442 52697 56345 47163 60690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134500000 27223 3576 25571 51160 41267 41267 1 9606 Homo sapiens 0.10823720400912862 TMAQHEELMK 2 Oxidation (M) 1248.5479 0.54785797 3440 P12270 TPR Nucleoprotein TPR yes yes 0 2 0 3.5 0.5 1 1 33.682 33.742 3 0.01916 7063 20230619_1882_Aki_TMTPro18x_K_F3 58.172 41.54 30324 24098 29136 32631 44392 43623 39682 34366 38767 33520 40134 38389 41196 30096 37830 38119 41571 36322 28025 22133 29943 32378 44725 43072 40237 35740 39592 34084 41152 38486 41818 31758 38733 38079 39703 34537 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45013000 27224 3440 25572 51161;51162 41268 41268 2072;2073 1 9606 Homo sapiens -0.06647404556565562 TMCLTEDK Unmodified 996.42562 0.42561757 2733 C9J0I9;Q86WB0;Q86WB0-3;Q86WB0-2;A4D1L4 ZC3HC1;NIPA Nuclear-interacting partner of ALK yes no 0 0 0 4 0 1 45.704 45.748 2 0.081308 12043 20230619_1883_Aki_TMTPro18x_K_F4 60.019 37.871 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27225 2733 25573 51163 41269 41269 1 9606 Homo sapiens -0.07273821568139738 TMDLPFLEASTLR Unmodified 1492.7596 0.7595653 3477 P19174;P19174-2;Q4LE43 PLCG1;PLCG1 variant protein 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1;Phosphoinositide phospholipase C yes no 0 0 0 7 0 1 63.296 63.329 3 0.082062 19374 20230619_1887_Aki_TMTPro18x_K_F7 29.491 7.618 14368 11688 16247 16937 15050 19955 19427 17637 23141 18363 19230 20694 20131 18401 20790 21862 20438 23392 13300 10743 16341 16706 15869 19882 19442 18204 23191 18603 19969 20825 20559 19235 21117 21997 19579 22191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28074000 27226 3477 25574 51164 41270 41270 1 9606 Homo sapiens 0.03289590406006937 TMGFCYQILTEPNADPR Unmodified 2011.9132 0.91318219 3354 O95373;B3KQG6 IPO7 Importin-7 yes no 0 0 0 7 0 1 61.119 61.158 3 5.6592E-05 18287 20230619_1887_Aki_TMTPro18x_K_F7 93.754 81.128 115920 108530 131100 150700 109300 95961 152830 156920 153730 169490 162240 157860 157480 140920 168130 201940 159520 190070 107410 99653 131700 148040 116130 102640 151650 156470 156970 170150 165870 160310 161420 149120 170510 201170 152920 180550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 395930000 27227 3354 25575 51165 41271 41271 1 9606 Homo sapiens -0.052297876106422336 TMGFCYQILTEPNADPR Oxidation (M) 2027.9081 0.90809681 3354 O95373;B3KQG6 IPO7 Importin-7 yes no 0 1 0 7 0 1 57.153 57.209 3 0.021401 16668 20230619_1887_Aki_TMTPro18x_K_F7 54.974 48.536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27228 3354 25575 51166 41272 41272 1962 1 9606 Homo sapiens -0.06474091473273802 TMGVMFTPLTVK Oxidation (M) 1339.688 0.68798027 2403 B4DMT5;H0YDT6;B3KSH1;O00303;B4DEW9 EIF3F Eukaryotic translation initiation factor 3 subunit F yes no 0 1 0 3.5 0.5 1 1 59.898 59.914 3 0.0010679 18290 20230619_1883_Aki_TMTPro18x_K_F4 84.169 62.296 87197 80621 94482 91392 91369 105340 101710 93907 117480 68860 62157 53365 60245 51458 86488 68885 63434 64795 80750 73875 95315 91626 95456 105200 102410 96081 116450 70572 66302 54879 62804 54078 86117 68770 60925 61581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124390000 27229 2403 25576 51167;51168 41273 41273 1481 1 9606 Homo sapiens 0.031723794477784395 TMGYSVTAPEDTRR Oxidation (M) 1598.7359 0.73586975 1098 O15305;A0A291FGD1;A0A0S2Z4J6;B2R6D4;H3BRM0;H3BV55;Q59F02;B7Z419;B7Z6A1;B7Z922 PMM2 Phosphomannomutase 2;Phosphomannomutase yes no 0 1 1 5 0 1 35.304 35.394 3 0.025757 7741 20230619_1885_Aki_TMTPro18x_K_F5 73.415 52.462 18475 12315 18674 19674 19959 24878 20353 18833 22831 21123 21255 21345 26859 23450 22551 22566 30498 24647 17065 11342 18982 19316 20665 24605 20575 19723 23063 21249 22128 21730 27044 24076 23441 22812 29063 23409 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32122000 27230 1098 25577 51169 41274 41274 675 1 9606 Homo sapiens -0.03954875098474986 TMHFGTPTAYEK Oxidation (M) 1397.6286 0.62855113 4578 Q9NQW7-4;Q9NQW7-3;Q5T6H7;B3KSI7;Q9NQW7-2;Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes no 0 1 0 7 0 1 40.748 40.815 3 0.04364 9561 20230619_1887_Aki_TMTPro18x_K_F7 43.761 29.071 98330 41743 121190 115320 149520 148550 144260 153610 150030 145290 180810 191920 180990 168220 159670 107970 175320 158940 90825 38908 121590 110730 152700 147690 146000 156300 153710 148680 184140 191740 183760 171090 163300 112550 167480 150490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 197710000 27231 4578 25578 51170 41275 41275 2817 1 9606 Homo sapiens -0.05435800242048572 TMHFGTPTAYEK Unmodified 1381.6336 0.63363651 4578 Q9NQW7-4;Q9NQW7-3;Q5T6H7;B3KSI7;Q9NQW7-2;Q9NQW7 XPNPEP1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 8 0 1 45.476 45.504 3 0.00011491 11699 20230619_1888_Aki_TMTPro18x_K_F8 109.16 71.136 72162 43044 65424 73043 67071 68226 78446 77929 75002 91101 83405 89747 99196 74509 79833 102620 115820 105360 66562 39696 67089 71203 69784 69554 78345 79300 77046 91264 85909 90646 99791 78905 83623 102740 110390 100080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94674000 27232 4578 25578 51171 41276 41276 1 9606 Homo sapiens -0.041914963794170035 TMIISPER Oxidation (M) 961.49027 0.49026674 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5;B4DGZ4;A0A494C1M2;O75533-2;A8K355 SF3B1 Splicing factor 3B subunit 1 yes no 0 1 0 4.5 0.5 1 1 38.615 38.682 2 0.039067 8938 20230619_1885_Aki_TMTPro18x_K_F5 70.856 53.914 98835 75385 96100 103510 118930 118680 115490 111750 135290 117690 129790 121180 123920 111960 116260 123600 141020 126570 91330 69262 98225 102400 121560 118710 117240 114810 136440 118780 133100 122590 126370 116390 119750 124180 134590 120240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 130660000 27233 3309 25579 51172;51173 41277 41277 1940 1 9606 Homo sapiens 0.007981213001698961 TMLEDLGMDDEGDDDPVPLPNVNAAILK Unmodified 2996.3995 0.39946898 2881 E5RJR5;E5RI56;P63208;E7ERH2;F8W8N3;P63208-2;E5RGM3 SKP1 S-phase kinase-associated protein 1 yes no 0 0 0 5 0 1 65.647 65.691 4 0.026984 20459 20230619_1885_Aki_TMTPro18x_K_F5 46.307 32.435 6410.2 6394.2 6427.3 6155.6 4064.6 6712.8 5990.8 6996.6 6808.6 9323.6 7962.4 9962.3 8782 8255.2 9456.1 10508 8468.5 9677.4 5935.6 5849.6 6492.9 6249.9 4478.8 6750.8 5961.3 7186.4 6948.5 9310.8 8167.9 10019 8972.8 8685.2 9555.8 10475 8120.5 9196 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24502000 27234 2881 25580 51174 41278 41278 1 9606 Homo sapiens -0.018874773232255393 TMLELINQLDGFDPR Unmodified 1760.8767 0.87672033 1235 C9JX88;A0A140VK70;P35998;Q75L23;P35998-2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 7.5 0.5 1 1 66.199 66.221 2 3.7627E-07 20600 20230619_1887_Aki_TMTPro18x_K_F7 158.04 133.19 18297 13632 18062 17810 15109 16320 22105 20060 18326 15657 17735 19796 19021 21496 20082 23326 19132 21319 16907 12519 18325 17630 16096 16700 21764 20128 18846 16188 18306 19979 19458 22182 20369 23293 18330 20262 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28159000 27235 1235 25581 51175;51176 41279;41280 41279 2 9606 Homo sapiens 0.026717035549381762 TMLELLNQLDGFDSR Unmodified 1750.856 0.85598488 3706 Q53XL8;Q53HB3;P62191;P62191-2 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 7 0.816 1 1 1 66.288 66.317 3 1.9045999999999998E-21 20635 20230619_1887_Aki_TMTPro18x_K_F7 218.58 200.22 26213 23268 23590 25881 22253 27950 28779 28825 31461 27712 27660 31078 33303 29847 31427 35694 29016 27452 24231 21321 24183 25958 23428 28123 28720 29359 31741 28176 28836 31361 33729 31113 31880 35309 27775 26167 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79889000 27236 3706 25582 51177;51178;51179 41281;41282 41281 2 9606 Homo sapiens 0.010591131752789806 TMLELLNQLDGFQPNTQVK Unmodified 2188.1198 0.11980414 4761 R4GNH3;A0A140VK42;P17980;E9PM69;E9PKD5 PSMC3 26S protease regulatory subunit 6A yes no 0 0 0 2 0 1 65.791 65.798 4 0.017587 21144 20230619_1881_Aki_TMTPro18x_K_F2 56.121 44.507 5766.2 4412.7 4834.5 4807.9 4793.6 6931.4 5716.5 4662.8 5940.2 5661.8 4410.6 5411.4 6343.6 3984 5100.1 6931.8 6061.2 6303.1 5322.6 4044.8 4990.1 4850.8 5022 6793.1 5714.2 4949.1 5982.7 5663.1 4689.1 5455 6346.3 4318.6 5271.1 6876.6 5791.7 5992.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15716000 27237 4761 25583 51180 41283 41283 1 9606 Homo sapiens 0.07326903489365577 TMLELLNQLDGFQPNTQVK Oxidation (M) 2204.1147 0.11471877 4761 R4GNH3;A0A140VK42;P17980;E9PM69;E9PKD5 PSMC3 26S protease regulatory subunit 6A yes no 0 1 0 8 0 1 63.094 63.119 3 6.5846E-05 19166 20230619_1888_Aki_TMTPro18x_K_F8 83.404 67.282 25519 22805 23614 26399 25112 26915 26668 27131 28307 29117 30881 32513 36464 30112 32991 33388 35163 36474 23595 20904 24185 26376 26004 27190 26857 27759 28861 29421 31822 32770 36866 31322 33730 33673 33631 34606 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151810000 27238 4761 25583 51181 41284 41284 2906 1 9606 Homo sapiens 0.06082599626734009 TMLESLIADK Unmodified 1119.5846 0.58456105 4154 Q7L576;X5D2F4;B3KWV6;A0A0G2JQT1;A0A0G2JR96;E7EVJ5;Q96F07;Q96F07-2;H7C229;B7Z8N7;A0A8V8TNU3;B7Z3H2;B7Z4I3;B7Z217;E7EW33;Q9NSN1;Q7L576-2;A0A087WZL7 CYFIP1;CYFIP2;DKFZp761H087 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 7 0 1 62.63 62.666 2 0.0101 19012 20230619_1887_Aki_TMTPro18x_K_F7 82.645 30.065 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27239 4154 25584 51182 41285 41285 1 9606 Homo sapiens 0.029552153316444674 TMLITHMQDLQEVTQDLHYENFR Oxidation (M) 2877.3426 0.34256323 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3 SEPT2 Septin-2 yes no 0 1 0 7 0 1 61.047 61.09 4 8.3418E-05 18249 20230619_1887_Aki_TMTPro18x_K_F7 77.689 69.501 31674 24487 31051 31258 27648 33978 30923 27900 32107 32167 36339 32399 39500 28615 34591 42510 35978 36947 29273 22479 31546 31043 29101 34005 31037 29052 32812 32293 37196 32792 39943 30392 35383 42159 34417 35148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 511610000 27240 3910 25585 51183 41286 41286 2588 1 9606 Homo sapiens -0.02101435298391152 TMLITHMQDLQEVTQDLHYENFR Unmodified 2861.3476 0.3476486 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3 SEPT2 Septin-2 yes no 0 0 0 7 0 1 61.822 61.861 4 7.419099999999999E-44 18623 20230619_1887_Aki_TMTPro18x_K_F7 229.15 217.63 122910 88017 96797 86234 71819 114090 105550 121040 122410 129240 103070 124300 160900 127860 130930 123110 112050 147130 113360 80630 100110 87707 77844 113360 105040 123290 123120 130010 109340 126410 160860 131630 132590 125180 107640 139360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 597520000 27241 3910 25585 51184 41287 41287 1 9606 Homo sapiens -0.008571314358050586 TMLPGEHQQVLSNLQSR Unmodified 1936.9789 0.97889399 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A494C1D7;Q03001-9;B4DSS9;Q03001-3;Q6P0N6 DST Dystonin yes no 0 0 0 1 0 1 46.382 46.382 3 7.4529E-05 12894 20230619_1880_Aki_TMTPro18x_K_F1 92.633 73.239 11746 10004 10187 13050 13955 12609 13434 11685 16641 12862 16912 17935 15254 14319 14274 18664 15963 18050 10852 9182.5 10549 12917 14169 12770 13667 12045 16765 13098 17272 17862 15585 15107 14651 18638 15271 17143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12547000 27242 1693 25586 51185 41288 41288 1 9606 Homo sapiens 0.047883696265898834 TMLYTPQEMK Unmodified 1240.5832 0.58318084 1442 B5BUB1;A0A384MTR5;Q9Y265;Q9Y265-2;E7ETR0;B3KRS7;H7C4G5;J3QLR1 RUVBL1 RuvB-like 1 yes no 0 0 0 8 0 1 52.88 52.955 3 0.00013289 14813 20230619_1888_Aki_TMTPro18x_K_F8 105.2 91.795 55154 46126 54558 55311 45519 64270 59461 50779 73860 57922 57151 64640 63982 55910 60714 61964 68744 64040 51002 42304 55361 55219 48502 63971 59567 53037 73716 58413 59779 64987 64956 58273 62241 62292 65664 60821 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96934000 27243 1442 25587 51186 41289 41289 1 9606 Homo sapiens -0.02748742028779816 TMMEDFRK Unmodified 1056.4732 0.47323646 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 1 7.5 0.5 1 1 45.554 45.617 3 0.00076444 11543 20230619_1887_Aki_TMTPro18x_K_F7 128.38 105.06 283990 217260 265330 281540 241340 314810 288490 286950 339830 392300 347090 365710 428800 333390 321480 446740 422230 399740 262340 199480 270880 279440 254340 315050 289800 297850 344000 389970 359380 371350 429830 351070 335020 444100 402860 380260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 245520000 27244 487 25588 51187;51188 41290 41290 1 9606 Homo sapiens -0.05274122577293383 TMNISPEQPQH Oxidation (M) 1296.5768 0.57684991 1873 B4DWG1;A0A994J542;B3KM47;Q9Y6Y8;B3KN10 SEC23IP SEC23-interacting protein yes no 0 1 0 2.5 0.5 1 1 34.72 34.779 2 0.024941 7555 20230619_1881_Aki_TMTPro18x_K_F2 91.095 74.427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27245 1873 25589 51189;51190 41291;41292 41291 1205 2 9606 Homo sapiens -0.059575439359377924 TMNLNPMILTNILSSPYFK Unmodified 2196.1323 0.13228309 4075 Q5VTL8;Q5VTL8-2;Q69YH0 PRPF38B;DKFZp434O1172 Pre-mRNA-splicing factor 38B yes no 0 0 0 7 0 1 66.89 66.913 3 4.4662E-07 20882 20230619_1887_Aki_TMTPro18x_K_F7 98.165 81.48 5305.9 6623.5 6791.7 8353.1 5949.9 6158.9 6101.1 7279.3 6067.3 5817.8 7305.7 8130.3 9532.9 5072.4 7944.4 9078.5 9769.2 7408.4 4933.7 6070.4 6770.9 8264.1 6242.2 6421.7 6150.5 7323.3 6232.8 6022.6 7540.6 8050.8 9563.8 5553.6 8211.9 8961.3 9313.1 7062.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12358000 27246 4075 25590 51191 41293 41293 1 9606 Homo sapiens 0.08206223628076259 TMQGSEVVNVLK Unmodified 1303.6806 0.6805867 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B4DHD2 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 8 0 1 53.955 54.026 3 0.00018287 15294 20230619_1888_Aki_TMTPro18x_K_F8 100.19 69.856 113580 103480 107070 130300 121670 145170 117770 120930 142170 144360 129900 158540 156040 114480 138910 180940 157820 184580 105050 94925 109670 129520 125260 145090 119740 125860 143080 145060 135200 158760 157520 123140 142840 180800 151000 175180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50735000 27247 3981 25591 51192 41294 41294 1 9606 Homo sapiens 0.04089363171715377 TMQNTNDVETAR Oxidation (M) 1394.6096 0.6096066 209 A0A2R8Y804;B4DSW9;A0A2R8Y543;A0A2R8Y5C3;B4DL06;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y7Z0;B5BU28;A0A024R2Q3;A0A2R8Y5A3;P35222 CTNNB1 Catenin beta-1 yes no 0 1 0 1.33 0.471 2 1 29.799 29.799 2;3 0.00054659 5616 20230619_1881_Aki_TMTPro18x_K_F2 121.9 111.14 8285.6 5777.3 13766 9682.9 13553 14436 12340 14046 17946 13968 14237 13578 14439 11706 10584 11489 20023 15192 7696.3 5323.1 13498 9523.6 14053 14222 12693 14361 17809 14117 14778 13734 14556 12136 11353 11754 19033 14408 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7011900 27248 209 25592 51193;51194;51195 41295;41296;41297 41297 129 3 9606 Homo sapiens -0.07191381603729496 TMQNTNDVETAR Unmodified 1378.6147 0.61469198 209 A0A2R8Y804;B4DSW9;A0A2R8Y543;A0A2R8Y5C3;B4DL06;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y7Z0;B5BU28;A0A024R2Q3;A0A2R8Y5A3;P35222 CTNNB1 Catenin beta-1 yes no 0 0 0 2 0 1 34.054 34.111 2 1.4214E-23 7313 20230619_1881_Aki_TMTPro18x_K_F2 248.05 229.38 27866 12560 32127 25794 26333 33211 26381 32608 35002 28282 28515 32127 39110 25806 26744 21714 41814 32832 25727 11636 32155 25053 27850 32967 26896 33214 34908 28937 30035 32194 38957 26664 28207 22528 39799 31099 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18042000 27249 209 25592 51196 41298 41298 1 9606 Homo sapiens -0.059470777411206655 TMQNTSDLDTAR Oxidation (M) 1367.5987 0.59870757 173 A0A0S2Z487;A0A024R1X8;P14923;C9JTX4;C9J826;C9JK18;C9JKY1 JUP Junction plakoglobin no no 0 1 0 2 0 1 32.743 32.803 2 6.8654E-10 6814 20230619_1881_Aki_TMTPro18x_K_F2 189.17 164.94 33870 21825 27446 36349 61545 40728 42732 41800 48186 39052 43456 47701 46616 40053 36637 46314 51438 41347 31228 20114 28948 35540 60528 40928 44318 42560 48599 39889 44966 47772 47022 41879 38296 46142 49003 39361 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34525000 27250 173 25593 51197 41299 41299 113 1 9606 Homo sapiens -0.0703878397803237 TMQNTSDLDTAR Unmodified 1351.6038 0.60379294 173 A0A0S2Z487;A0A024R1X8;P14923;C9JTX4;C9J826;C9JK18;C9JKY1 JUP Junction plakoglobin no no 0 0 0 2.5 0.5 1 1 37.513 37.569 2 3.287E-11 8626 20230619_1882_Aki_TMTPro18x_K_F3 221.55 198.23 36422 31463 40728 44599 62951 54329 60375 55284 65315 49845 52543 53633 63135 49710 44831 55834 72844 61017 33723 28904 41366 44075 63420 54245 61134 56271 65728 50812 54965 54154 63240 51758 47506 56268 69344 57942 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57691000 27251 173 25593 51198;51199 41300;41301 41301 2 9606 Homo sapiens -0.05794480115400802 TMSAQIEGGVHGLHSYEK Oxidation (M) 1958.9156 0.91562503 427 P20839-6;B4DNJ7;P20839-5;P20839-7;P20839-3;P20839;P20839-2;P20839-4;Q6ZNB1;A0A024R725;C9J381;B3KRZ3 IMPDH1;IMPDH Inosine-5'-monophosphate dehydrogenase 1;Inosine-5'-monophosphate dehydrogenase yes no 0 1 0 6 0 1 40.207 40.299 4 0.0093323 9648 20230619_1886_Aki_TMTPro18x_K_F6 66.777 50.654 26389 22661 32946 31706 33748 28263 34068 32253 30895 34801 35767 41046 39612 30298 32779 42833 40577 41623 24458 20815 32916 31236 34894 28953 34249 32759 31879 35200 36671 41015 39964 32278 33939 42742 38756 39543 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29567000 27252 427 25594 51200 41302 41302 267 1 9606 Homo sapiens -0.025476158813035 TMTNALR Unmodified 805.41162 0.41162248 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O43242-2 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 7.5 0.5 1 1 36.808 36.835 2 0.0022042 8203 20230619_1888_Aki_TMTPro18x_K_F8 163.34 91.321 75295 54858 73399 69584 93081 98990 81965 83866 119390 55619 57991 54922 50263 47426 62756 52311 66509 48329 69561 50368 74983 69448 94875 97513 84401 85943 116870 57846 62048 55561 52211 49400 63736 52312 63473 46012 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41606000 27253 2361 25595 51201;51202 41303 41303 1 9606 Homo sapiens 0.0011331378572094764 TMTTSHLK Oxidation (M) 933.45897 0.45896661 2747 E9PQX9;C9JCC6;Q14919;Q14919-2;E9PMW2 DRAP1 Dr1-associated corepressor yes no 0 1 0 8 0 1 31.401 31.412 3 0.023056 6120 20230619_1888_Aki_TMTPro18x_K_F8 60.892 25.792 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27254 2747 25596 51203 41304 41304 1642 1 9606 Homo sapiens -0.010424517339288286 TMVQLGICAFR Unmodified 1294.6526 0.65259781 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 5 0 1 60.209 60.261 2 4.4375E-06 17971 20230619_1885_Aki_TMTPro18x_K_F5 160 119.91 85336 74373 77463 78461 75514 85455 91658 90657 93870 75167 61089 49585 67519 52711 80434 72167 68984 58967 78880 68120 79331 79048 79042 86022 91535 91825 94179 76046 64477 51670 69295 55329 80881 71500 66045 56184 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82947000 27255 12 25597 51204 41305 41305 1 9606 Homo sapiens 0.017057617106047473 TMYLEDR Oxidation (M) 942.41168 0.41168206 342 P20340;A0A024R5J5;P20340-2;A0A024R5H8;Q6FGX3;Q53ET8;P20340-4;P20340-3;Q9NRW1;Q6AZ91;F5GX61;J3KR73;Q9NRW1-2;C9JB90;Q9UL30;Q9UL29 RAB6A;RAB6B;RAB6A' Ras-related protein Rab-6A;Ras-related protein Rab-6B yes no 0 1 0 2 0 1 38.383 38.446 2 0.050665 9106 20230619_1881_Aki_TMTPro18x_K_F2 78.77 56.622 109620 83340 93470 113150 106760 109330 108800 110480 125430 110680 143070 133430 122360 117570 120740 133280 151350 142150 101190 76562 96597 111730 109880 110880 110120 112830 127440 112560 144990 133970 125580 122560 124560 134150 144460 134950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141910000 27256 342 25598 51205 41306 41306 201 1 9606 Homo sapiens -0.06182731004912512 TNADTDGMVK Unmodified 1050.4652 0.4651742 425 B4DFL1;E9PEX6;B4DMK9;A0A024R713;P09622;P09622-2;P09622-3 DLD Dihydrolipoyl dehydrogenase;Dihydrolipoyl dehydrogenase, mitochondrial yes no 0 0 0 3 0 1 40.684 40.743 2 0.00092165 9943 20230619_1882_Aki_TMTPro18x_K_F3 115.18 60.771 23397 11904 25631 33138 33741 42758 34804 44563 31516 26472 38189 41622 39349 36248 31663 19859 48854 40936 21601 11084 26031 31795 34455 42478 34955 44888 32530 28173 38938 41357 39787 36712 33207 21446 46522 38687 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18185000 27257 425 25599 51206 41307 41307 1 9606 Homo sapiens -0.05803978293079126 TNADVMTALSQGYR Unmodified 1525.7195 0.7194914 2023;3404 A8K379;P07948;B4DQ79;Q6NUK7;P07948-2 LYN Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lyn no no 0 0 0 3.33 3.3 2 1 54.173 54.208 2;3 4.1626E-22 16108 20230619_1880_Aki_TMTPro18x_K_F1 177.21 158.15 71336 58479 68500 68500 63259 81671 69302 71319 78602 78028 75279 83737 89925 78242 78733 88187 95793 96020 65942 53625 69751 68538 66395 81327 69844 73749 79455 78686 78094 84542 90814 81421 81248 88873 91491 91117 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 167530000 27258 2023;3404 25600 51207;51208;51209 41308;41309;41310 41308 3 9606 Homo sapiens -0.022339562645811384 TNAENEFVTIK Unmodified 1264.6299 0.62993134 2778 H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2;H6VRF9 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 4.5 0.5 1 1 51.338 51.39 2 0.00070175 14421 20230619_1885_Aki_TMTPro18x_K_F5 124.1 82.124 + 8484.6 8166.5 10429 15151 194370 18362 53598 12275 36383 9562.7 10923 10834 14599 66705 14583 11414 11618 13841 7869 7526.2 12968 14742 181950 18731 61462 13016 37174 10005 12597 12829 15159 63797 14648 12553 11160 13112 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37981000 27259 2778 25601 51210;51211 41311 41311 1 9606 Homo sapiens 0.008201571183917622 TNAVSEIK Unmodified 860.46035 0.46034682 2457;2620 Q59FH4;H0Y5J4;B4DDU5;Q9UJU6-5;Q9UJU6;B4DKZ4;B4DNX5;B4DXL9;Q9UJU6-2;Q9UJU6-3;B4DDD6;Q9UJU6-4;B4DUF9;Q9UJU6-6 DBNL Drebrin-like protein no no 0 0 0 5.5 0.5 1 1 42.504 42.593 2 0.0027477 10599 20230619_1885_Aki_TMTPro18x_K_F5 134.66 51.394 65682 39783 78643 86216 100430 104700 78176 94734 95021 75821 116080 121200 111180 103420 103740 52667 118940 118300 60735 36825 79164 83393 101940 104170 80719 96942 96592 79048 117920 120270 113320 104620 106160 57603 113650 111670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84515000 27260 2457;2620 25602 51212;51213 41312 41312 1 9606 Homo sapiens 0.02453505626488095 TNCNVAVINVGAPAAGMNAAVR Oxidation (M) 2185.0732 0.073205078 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;Q8WTZ9 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes no 0 1 0 2 0 1 48.734 48.799 3 0.003585 13897 20230619_1881_Aki_TMTPro18x_K_F2 63.398 46.319 19967 14491 12485 18097 19795 17507 21071 19222 26698 18064 18321 18251 20120 13922 21820 21930 20119 18871 18392 13303 13446 17966 20009 17799 21321 19496 26522 18338 19277 18384 20539 14937 22064 21737 19258 17961 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61145000 27261 1831 25603 51214 41313 41313 1172 1 9606 Homo sapiens 0.028071403864487365 TNEGVIEFR Unmodified 1063.5298 0.52982336 1567 A0A590UJK4;A0A590UK01;A0A590UJP7;Q59GY3;A8K588;A0A590UK80;Q13247-3;Q13247;V9HVZ0 SRSF6;HEL-S-91 Serine/arginine-rich splicing factor 6 yes no 0 0 0 3 0 1 45.857 45.933 2 0.00044081 12266 20230619_1882_Aki_TMTPro18x_K_F3 135.72 94.731 294550 209590 263990 337170 312620 385330 327020 335390 478680 334080 375570 378020 402830 349000 317200 366930 409600 427460 271910 192980 271950 330320 321940 384540 333450 346080 474470 339440 391250 380810 406360 361960 329430 371700 391140 405300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201260000 27262 1567 25605 51215 41314 41314 1 9606 Homo sapiens 0.0005996457521177945 TNEKVELQELNDR Unmodified 1586.79 0.79001381 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;Q45VM7;P17661;L7RDA5;Q45VM8;Q45VM6;A5Z217;A0A384NPX1;Q53SB5;Q9H319;A0A7R6M6U0;B4DUI0 VIM;HEL113;DES;tmp_locus_29 Vimentin;Desmin yes no 0 0 1 3.5 0.5 1 1 44.494 44.552 3 6.0535E-06 11631 20230619_1882_Aki_TMTPro18x_K_F3 128.22 112 82160 186410 240040 86287 544840 146670 402200 168100 47854 106420 122290 24293 63305 31067 623930 23913 33437 29180 78021 169540 233930 96867 532940 145830 402320 169110 72322 108140 120130 28900 92306 31656 588670 26363 37671 27675 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218820000 27263 3414 25606 51216;51217 41315 41315 1 9606 Homo sapiens 0.0200904032476501 TNEQMHQLVAAYK Unmodified 1531.7453 0.74531222 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;E5RJF5;E5RK63;A0A0S2Z301;A0A0S2Z377 ANXA6 Annexin A6;Annexin no no 0 0 0 4.5 3.5 1 1 48.112 48.141 3;4 9.1631E-07 12725 20230619_1888_Aki_TMTPro18x_K_F8 142.39 110.33 276360 230560 257160 285680 290860 335720 292780 293680 303520 352520 361670 380950 374890 329320 366870 385260 423560 441670 255430 211530 263520 284580 299640 334700 295520 304500 311210 353900 369110 383620 381920 344410 376430 389350 404830 418830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 637760000 27264 1062;1064 25607 51218;51219 41316;41317 41317 2 9606 Homo sapiens 0.0007093797773904953 TNEQMHQLVAAYK Oxidation (M) 1547.7402 0.74022685 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;E5RJF5;E5RK63;A0A0S2Z301;A0A0S2Z377 ANXA6 Annexin A6;Annexin no no 0 1 0 6.5 0.5 1 1 40.701 40.781 3 0.0005225 9546 20230619_1887_Aki_TMTPro18x_K_F7 89.624 64.689 122780 105370 136230 141740 175240 163900 149420 152180 163820 161350 210270 181800 187340 171350 173100 183470 204570 203370 113660 96743 137840 140420 177970 163850 152670 156520 167880 163220 212340 183420 191330 177710 178070 185280 195420 192960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 471480000 27265 1062;1064 25607 51220;51221 41318;41319 41319 631 2 9606 Homo sapiens -0.011733658848925188 TNFEGPPR Unmodified 916.44028 0.44028008 4434 Q9BTV5;M0R366 FSD1 Fibronectin type III and SPRY domain-containing protein 1 yes no 0 0 0 4.5 0.5 1 1 37.039 37.107 2 0.034494 8378 20230619_1883_Aki_TMTPro18x_K_F4 76.064 66.314 86417 71278 90622 102620 112530 114100 104430 110420 127610 98032 131410 129050 119770 107000 109550 109840 151860 126860 79944 65503 92096 101170 114870 114420 106500 112740 128700 100730 134110 128880 122200 111230 113900 111310 144710 120400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133870000 27266 4434 25608 51222;51223 41320;41321 41320 2 9606 Homo sapiens -0.021282453134631396 TNFFGTR Unmodified 841.40825 0.40825167 1468 A0A384NL53;P16152;E9PQ63;A8MTM1;P16152-2 CBR1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 2.5 1.12 1 1 1 1 45.604 45.657 2 0.067069 12143 20230619_1882_Aki_TMTPro18x_K_F3 78.516 68.102 1182500 1019700 1024100 1248000 1291900 1476200 1392100 1452500 1661600 1388500 1472400 1440500 1649100 1338900 1534300 1725900 1641200 1572400 1092600 935290 1059100 1244400 1324500 1474600 1405800 1483500 1669400 1408800 1527300 1457600 1671700 1405000 1569100 1719100 1568800 1495300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 910940000 27267 1468 25609 51224;51225;51226;51227 41322;41323 41322 2 9606 Homo sapiens -0.018796129966176522 TNFMYQVDTLK Unmodified 1358.654 0.6540376 1030 A0A0F7NGI8;Q32MZ4-3;Q32MZ4-2;Q32MZ4;B4DPC0;Q05D04;A0A8V8TLX7;Q32MZ4-4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 yes no 0 0 0 8 0 1 59.376 59.418 3 0.027969 17570 20230619_1888_Aki_TMTPro18x_K_F8 55.314 32.222 34872 27110 35188 31400 31559 41350 36317 36703 48131 40987 39640 37203 45035 40906 41272 43160 38977 44914 32238 24863 35649 31503 33266 40938 36710 37917 48015 41110 41290 38076 45629 42191 41920 43433 37356 42619 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14149000 27268 1030 25610 51228 41324 41324 1 9606 Homo sapiens -0.010943257196004197 TNHIGHTGYLNTVTVSPDGSLCASGGK Unmodified 2742.3031 0.30314125 2907 P63244;E9KL35;J3KPE3;H0Y8W2;D6RAC2;D6REE5;H0YAM7;D6RHH4;D6R9L0;D6R9Z1;D6RFX4;B4DVD2;H0Y8R5 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 1.5 0.5 1 1 46.538 46.578 4 5.7932E-39 12942 20230619_1880_Aki_TMTPro18x_K_F1 211.94 197.18 295010 10373 204460 277780 227940 136750 238420 272840 249080 361460 331630 341150 391600 309840 184100 405480 229080 402360 270460 12292 215850 256150 234490 151850 240300 271710 257050 359540 338740 346190 387660 325850 194650 405050 219950 381560 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1728399999.9999998 27269 2907 25611 51229;51230 41325;41326;41327 41325 3 9606 Homo sapiens 0.0016818074236653047 TNHIGWVR Unmodified 981.51445 0.51444807 2731 F8W1F5;C9IZY8;Q8IVF7-2;Q8IVF7-3;Q8IVF7;Q96PY5;Q96PY5-3 FMNL3;FMNL2 Formin-like protein 3;Formin-like protein 2 yes no 0 0 0 3 0 1 36.531 36.586 3 0.017858 8200 20230619_1882_Aki_TMTPro18x_K_F3 65.88 50.868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27270 2731 25612 51231 41328 41328 1 9606 Homo sapiens 0.02295142568709707 TNHIYVSSDDIK Unmodified 1390.6729 0.67285879 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8;B4DK16;A0A994J6S8 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 5 0 1 42.751 42.834 3 0.055948 10698 20230619_1885_Aki_TMTPro18x_K_F5 53.377 36.845 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27271 1863 25613 51232 41329 41329 1 9606 Homo sapiens -0.006850728241715842 TNHQGIYVLQDNK Unmodified 1528.7634 0.76340513 2172 B0AZV9;Q86SZ2 TRAPPC6B Trafficking protein particle complex subunit 6B yes no 0 0 0 7.5 0.5 1 1 43.251 43.296 3 2.5392E-06 10603 20230619_1887_Aki_TMTPro18x_K_F7 135.91 117.5 35350 14046 25250 39950 33046 28366 35481 39825 43217 35561 39009 37576 39231 34817 33087 41975 36302 43018 32505 13107 26688 38003 33745 29795 35868 39785 43396 36229 40213 37986 39752 36379 33983 42098 34749 40823 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57984000 27272 2172 25614 51233;51234 41330 41330 1 9606 Homo sapiens 0.020173962240960464 TNIDESAMPPPPPQGVK Oxidation (M) 1792.8665 0.86654957 577 A0A024R9J0;O60216;A0A8I5KWV3 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 1 0 4.5 0.5 1 1 46.121 46.181 3 5.9244E-07 12127 20230619_1885_Aki_TMTPro18x_K_F5 117 96.207 20533 17147 19804 19711 20516 23182 23164 21062 27508 22954 26340 21265 24600 16894 28487 23773 21034 21856 18983 15720 20191 19746 21335 23132 23332 21718 27710 23055 26979 21539 25309 17953 28463 23688 20203 20776 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202200000 27273 577 25615 51235;51236 41331 41331 340 1 9606 Homo sapiens 0.0018309582969777694 TNIDESAMPPPPPQGVK Unmodified 1776.8716 0.87163495 577 A0A024R9J0;O60216;A0A8I5KWV3 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 0 0 5 0 1 49.841 49.917 3 0.058436 13718 20230619_1885_Aki_TMTPro18x_K_F5 41.348 21.509 32027 22840 28413 28449 26411 31556 30503 30782 35650 34634 34715 32081 38778 31274 34610 41566 37709 35428 29563 20968 29135 28316 27736 31651 30685 31599 35996 34725 35821 32683 39241 32832 35476 41242 36034 33723 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33352000 27274 577 25615 51237 41332 41332 1 9606 Homo sapiens 0.014273996923293453 TNIIPVLEDAR Unmodified 1239.6823 0.68230126 1973 A6NHQ2 FBLL1 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 yes yes 0 0 0 4.5 0.5 1 1 55.75 55.786 2 1.2471E-08 16165 20230619_1885_Aki_TMTPro18x_K_F5 180.81 0 422310 384360 386400 443310 409990 493620 481360 451920 522660 490350 474690 475850 491510 439930 481360 496910 486930 539010 390500 352270 396300 443510 426300 494350 482370 465690 528220 493190 490130 482470 500780 458020 490070 500770 466190 511320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 368950000 27275 1973 25616 51238;51239 41333;41334 41334 2 9606 Homo sapiens 0.07204740251972908 TNISTASATVSAATSTESISTR Unmodified 2155.0604 0.06043459 3796 Q05209;Q05209-2;Q05209-3;H3BM04;B4E105 PTPN12 Tyrosine-protein phosphatase non-receptor type 12;Protein-tyrosine-phosphatase yes no 0 0 0 8 0 1 49.432 49.504 3 7.5329E-05 13313 20230619_1888_Aki_TMTPro18x_K_F8 82.916 59.084 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27276 3796 25617 51240 41335 41335 1 9606 Homo sapiens 0.029106790088917478 TNIVTASVDAINFHDK Unmodified 1743.8792 0.87916317 3205 O00154-4;O00154-6;O00154-7;O00154;O00154-5;B4DUX0;K7EKP8;O00154-2;O00154-3 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 7.5 0.5 1 1 57.706 57.758 3 2.3472E-34 16898 20230619_1887_Aki_TMTPro18x_K_F7 262.83 238.82 342300 283390 327910 352930 217930 272300 314500 295220 310920 360800 351800 324150 396310 349040 357080 372490 354940 403450 316430 260020 332820 349700 237870 281980 311580 301980 318800 359960 360830 331660 401210 360540 363770 375650 339960 382690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1052399999.9999999 27277 3205 25618 51241;51242 41336;41337 41336 2 9606 Homo sapiens 0.03697875284251495 TNLASTVLSLK Unmodified 1145.6656 0.66558856 2093 K7END7;F5H658;B7Z8F4;Q86YB2;Q86X36;A8K6J9;Q14562 DHX8 ATP-dependent RNA helicase DHX8 yes no 0 0 0 4 0 1 61.575 61.578 3 0.0073421 18996 20230619_1883_Aki_TMTPro18x_K_F4 69.602 49.989 27384 21350 21784 27312 23524 28011 25302 28103 35744 25128 25420 24602 28447 21973 28304 31417 27961 30750 25271 19599 22655 27094 24395 28265 25728 28620 35382 25559 26696 24933 28920 23264 28783 31370 26776 29203 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32694000 27278 2093 25619 51243 41338 41338 1 9606 Homo sapiens 0.0985823936603083 TNLAVHEDK Unmodified 1025.5142 0.5141733 1036 O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;A0A7I2V581;A0A7I2V3V4;Q6PKD1;Q6PJC4;Q57YV5 KIF5C Kinesin heavy chain isoform 5C;Kinesin-like protein yes no 0 0 0 3.5 0.5 1 1 36.257 36.303 3 0.0024514 8096 20230619_1882_Aki_TMTPro18x_K_F3 88.187 59.788 83645 44687 86912 99410 112990 112350 102180 114150 116750 81156 124760 123770 106200 95347 111190 63748 122120 119590 77202 41412 88468 95955 114920 112590 104140 115600 118250 85111 126820 122710 109240 97655 113310 67862 116720 113010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121510000 27279 1036 25620 51244;51245 41339;41340 41339 2 9606 Homo sapiens 0.0024367805817746557 TNLDESDVQPVK Unmodified 1343.6569 0.65687437 4728 Q9Y3I0;B4DNA0;B4DNG5 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 2.5 1.12 1 1 1 1 45.756 45.807 3 1.8968E-05 12210 20230619_1882_Aki_TMTPro18x_K_F3 125.36 102.12 419890 319820 403340 384670 454540 494800 473330 452600 572530 504120 573090 553510 584760 486690 484540 601260 649760 595770 387970 293440 411770 384690 468690 491050 479190 466630 577440 508430 588210 557660 591780 510300 504210 601730 619720 566120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 867000000 27280 4728 25621 51246;51247;51248;51249 41341;41342 41342 2 9606 Homo sapiens -0.001207790611033488 TNLDLGPTAPSLEK Unmodified 1454.7617 0.76167379 1719;1783 A0A7R6KYT5;E9PR05;A0A3B3ITZ1;Q9HB80;A0A8I5KXR3;Q03164-2;Q03164;Q03164-3 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 no no 0 0 0 6 0 1 54.654 54.732 3 0.00096564 15987 20230619_1886_Aki_TMTPro18x_K_F6 81.526 61.42 46665 40010 52470 52722 57529 52613 55002 52111 57049 57874 54185 52932 61298 50223 56296 64723 57730 56991 43207 36727 52879 52200 59177 53228 55678 53439 57933 58031 56041 53886 62085 52666 57459 64353 55217 54215 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64787000 27281 1719;1783 25622 51250 41343 41343 1 9606 Homo sapiens 0.052483424154843306 TNLEDVGRR Unmodified 1058.5469 0.54687041 2870 E5KS95;P43897;P43897-2;B4DHY8 TSFM Elongation factor Ts, mitochondrial yes no 0 0 1 4 0 1 33.41 33.464 3 1.6726E-05 6911 20230619_1883_Aki_TMTPro18x_K_F4 120.22 62.141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27282 2870 25623 51251 41344 41344 1 9606 Homo sapiens 0.019938851810593405 TNLIVNYLPQNMTQDELR Oxidation (M) 2177.0787 0.078667612 3938 Q15717;Q15717-2;M0QZR9 ELAVL1 ELAV-like protein 1 yes no 0 1 0 7 0 1 60.561 60.604 3 0.0062352 18052 20230619_1887_Aki_TMTPro18x_K_F7 63.056 50.223 49624 37364 38447 39514 43971 47677 49860 48041 52549 50707 52110 49942 53331 43304 44819 44492 43536 50529 45777 34242 40077 39860 45411 47617 50006 49118 53368 51079 53519 50498 53961 44975 45655 45037 41716 47903 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140990000 27283 3938 25624 51252 41345 41345 2617 1 9606 Homo sapiens 0.03721142449921899 TNLIVNYLPQNMTQDELR Unmodified 2161.0838 0.08375299 3938 Q15717;Q15717-2;M0QZR9 ELAVL1 ELAV-like protein 1 yes no 0 0 0 8 0 1 62.557 62.582 3 2.0053E-09 18887 20230619_1888_Aki_TMTPro18x_K_F8 125.73 116.79 69861 75732 69725 80798 131160 90141 89860 115760 124590 83070 93205 130810 101440 125900 113200 108890 143270 102600 64729 69324 71757 81358 129900 91194 94083 115540 123650 87208 97761 130370 104170 128880 116510 109420 136500 97664 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 714120000 27284 3938 25624 51253 41346 41346 1 9606 Homo sapiens 0.04965446312507993 TNLIVNYLPQNMTQEEFR Unmodified 2209.0838 0.08375299 1058 P26378-4;A0A494C0F8;P26378;P26378-3;P26378-1;P26378-5;P26378-2;A0A494C147;B1APY9;A0A494C1D9;A0A0R4J2E6;B7Z5E0;A0A494C015;A0A494C0Q5;A0A494C011;A0A494C0M6;A0A494BZW4 ELAVL4 ELAV-like protein 4;ELAV-like protein yes no 0 0 0 8 0 1 62.817 62.842 3 6.3982E-05 19019 20230619_1888_Aki_TMTPro18x_K_F8 91.414 81.626 26200 17571 27536 29876 23929 36300 32740 22353 34257 33464 31962 32943 39288 31269 39499 39929 39781 39166 24209 16196 27838 29209 25446 35858 32524 24135 34730 33236 33243 33412 39862 32779 40178 39942 38055 37210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285850000 27285 1058 25625 51254 41347 41347 1 9606 Homo sapiens 0.027574463124892645 TNLIVNYLPQNMTQEELK Unmodified 2147.0933 0.093255043 945 A0A0A0MRX1;Q12926-2;Q12926;B1AM48 ELAVL2 ELAV-like protein;ELAV-like protein 2 yes no 0 0 0 8 0 1 62.781 62.806 3 4.7267E-06 18987 20230619_1888_Aki_TMTPro18x_K_F8 96.805 80.921 91287 75895 84600 96928 67980 77117 64892 71271 81389 102660 95598 92312 102270 85903 94777 114180 108560 113240 84368 69652 86292 95881 71913 79366 66216 74086 82677 101730 97683 93984 103810 90340 97378 114170 103770 107550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48560000 27286 945 25626 51255 41348 41348 1 9606 Homo sapiens 0.065592145980645 TNLLQVCER Unmodified 1131.5706 0.57064232 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4DKC9;B4DTM7 VCL;HEL114 Vinculin yes no 0 0 0 6.5 0.5 1 1 46.459 46.545 2 0.0022895 11973 20230619_1887_Aki_TMTPro18x_K_F7 107.83 78.022 185480 154330 160440 195700 244800 287140 292320 283970 337960 223870 197020 212730 243890 182900 194310 268440 227090 222870 171340 141620 166660 195380 249080 283220 293080 288600 335830 229340 210920 215570 245010 194220 200680 265600 216930 212180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334700000 27287 51 25627 51256;51257 41349 41349 1 9606 Homo sapiens 0.01011982623208496 TNLPIFK Unmodified 831.48544 0.48543935 3277;882 O60493;O60493-3;Q3SYF1;A0A087X0R6;Q9UMY4;Q9UMY4-1 SNX3;SNX12 Sorting nexin-3;Sorting nexin-12 no no 0 0 0 3.5 0.5 1 1 55.223 55.249 2 0.0082438 16458 20230619_1882_Aki_TMTPro18x_K_F3 120.92 44.787 437350 355000 394340 433940 378300 463870 457270 439670 495890 538700 510790 485800 563410 461870 475690 595760 530620 528220 404060 325680 404240 432140 396790 466160 457700 453520 503920 537490 525470 494940 569080 484350 488960 592420 507150 502430 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 340910000 27288 3277;882 25628 51258;51259 41350 41350 1 9606 Homo sapiens 0.06295605219713707 TNLQPLESTQSQDF Unmodified 1606.7475 0.74748029 4701 Q9Y248 GINS2 DNA replication complex GINS protein PSF2 yes yes 0 0 0 3 0 1 57.877 57.908 2 0.00014979 17539 20230619_1882_Aki_TMTPro18x_K_F3 103.18 85.969 21941 16620 20062 19080 20260 20143 19350 23981 25144 25950 26025 23183 23075 22386 26450 31073 25661 21467 20264 15242 20527 19095 21002 20386 19762 24266 25331 26030 26518 23658 23824 23551 26819 30539 24531 20506 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34003000 27289 4701 25629 51260 41351 41351 1 9606 Homo sapiens -0.03162354803475864 TNLSAVVAAQSNWEK Unmodified 1616.8158 0.81583463 3327 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;O76094-2;Q71V07;R4GNC1;D6RDY6 HEL103;SRP72 Signal recognition particle subunit SRP72 yes no 0 0 0 4.5 3.5 1 1 57.819 57.844 3 8.1091E-08 17614 20230619_1880_Aki_TMTPro18x_K_F1 133.25 119.59 127440 104860 137720 147260 128090 155340 145050 142760 146720 171240 151800 149370 195640 141730 135790 148910 173610 174520 117920 96338 138970 145290 134320 156110 145370 147480 149790 170840 157370 152300 195280 147030 141280 150930 165750 165490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 235280000 27290 3327 25630 51261;51262 41352;41353 41352 2 9606 Homo sapiens 0.03209934567007622 TNNIELHYCTGAYR Unmodified 1710.7784 0.77840327 4605 Q9NVM9;Q9NVM9-2;H0YH12 ASUN Protein asunder homolog yes no 0 0 0 7 0 1 42.275 42.35 3 7.3836E-06 10246 20230619_1887_Aki_TMTPro18x_K_F7 113.43 104.48 41490 36001 39465 47239 45122 50396 46107 55004 61521 54396 53237 63268 57195 48513 52111 59439 64743 56844 38364 33044 40391 46816 46482 50816 46922 55832 61469 55271 55248 63292 58025 51094 53813 59394 61769 54047 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46738000 27291 4605 25631 51263 41354 41354 1 9606 Homo sapiens -0.048554799702515083 TNNPLPLEQR Unmodified 1180.62 0.62003536 2083 A8K607;Q9UIA9;E7ESC6;H0YBE1 XPO7 Exportin-7 yes no 0 0 0 5.5 0.5 1 1 42.78 42.868 2 0.0019771 10679 20230619_1885_Aki_TMTPro18x_K_F5 98.898 64.366 227430 184380 208650 225330 236960 265710 230190 231670 268830 254390 295060 292510 294880 253540 268000 305620 317650 299130 210140 169150 214030 224700 243840 264850 233750 239650 272690 257090 301460 294000 299740 265520 275940 305830 303310 284260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 249680000 27292 2083 25632 51264;51265 41355;41356 41355 2 9606 Homo sapiens 0.03695013903643485 TNNVSEHEDTDKYR Unmodified 1706.7496 0.74960556 3646 P53618;E9PP73 COPB1 Coatomer subunit beta yes no 0 0 1 2.5 0.5 1 1 32.029 32.099 4 1.8323E-08 6528 20230619_1881_Aki_TMTPro18x_K_F2 158.29 139.46 42666 31618 44567 45703 64173 59728 49182 53191 36419 48268 54289 45969 39110 26794 42336 23638 40557 23333 39444 29070 45397 45164 64573 59194 50106 54636 38596 48920 54151 46094 40486 28134 42784 23862 38703 22228 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31371000 27293 3646 25633 51266;51267 41357;41358 41357 2 9606 Homo sapiens -0.07549926065667023 TNPGCPAEVR Unmodified 1099.508 0.50804206 2097 Q6PD62;A8K6X9;H0YCE8 CTR9 RNA polymerase-associated protein CTR9 homolog yes no 0 0 0 3.5 0.5 1 1 32.534 32.598 2 0.0014295 6557 20230619_1883_Aki_TMTPro18x_K_F4 127.37 105.84 62394 35069 64263 69242 89650 98443 76088 82858 95444 73102 87521 82584 95563 82610 70262 51005 104220 91849 57595 32424 65535 67422 90769 96901 78109 85426 95768 74758 90452 83365 96110 83607 73643 54127 99301 86851 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56206000 27294 2097 25634 51268;51269 41359;41360 41360 2 9606 Homo sapiens -0.037731634449983176 TNPICSMTWGFDSISSVK Unmodified 2028.9285 0.9284979 801 A0A087WT20;Q9NV06;A0A087X1F8;B3KME9;E5RHM4 DCAF13 DDB1- and CUL4-associated factor 13 yes no 0 0 0 3 0 1 63.806 63.837 3 1.9496E-06 20047 20230619_1882_Aki_TMTPro18x_K_F3 100.97 89.851 48877 48296 51813 48034 48496 61062 54071 57618 56044 55395 48933 51432 51397 50844 52551 64884 53835 59126 45276 44196 52326 48744 50830 60682 54281 59014 56728 55985 50683 52390 52489 53172 53560 64619 51533 56200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67954000 27295 801 25635 51270 41361 41361 1 9606 Homo sapiens -0.04480920813466582 TNPPLIQEK Unmodified 1038.571 0.5709599 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;Q2TU89;E9PKF8 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 6 0 1 45.532 45.618 2 6.0154E-08 11944 20230619_1886_Aki_TMTPro18x_K_F6 194.94 154.89 107900 78693 80608 100780 117620 145560 114780 114410 167850 109960 114480 109320 123670 93403 99992 134960 139590 110270 99491 72260 84861 100480 119460 143010 117440 118880 165700 111500 120290 110560 124790 99085 104460 133470 132970 105110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107070000 27296 3752 25636 51271 41362 41362 1 9606 Homo sapiens 0.053217256147036096 TNPVSSGPGDPR Unmodified 1182.5629 0.56291441 4161 Q7Z2K8;Q7Z2K8-2 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 yes no 0 0 0 4.5 0.5 1 1 33.918 33.988 2 0.0003714 7104 20230619_1883_Aki_TMTPro18x_K_F4 110.47 66.027 25502 14305 27703 30834 26180 24947 20039 23635 24236 30780 40408 43491 41204 36044 32718 23729 51156 42497 23552 13246 27939 29671 27121 25631 20737 24443 25119 31096 40740 43274 41639 36792 34377 25130 48708 40196 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44673000 27297 4161 25637 51272;51273 41363 41363 1 9606 Homo sapiens -0.021064533726985246 TNQELQEINR Unmodified 1243.6157 0.61567826 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;A6NMY6;H0YMU9;H0YL33;H0YM50;B3KRQ1;B4DNH8;H0YNB8;H0YKS4;H0YN28;H0YNP5;A0A7I2V4P4;H0YMM1;H0YNA0;H0YLE2 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 2.5 0.5 1 1 38.855 38.915 2 1.9046E-05 9257 20230619_1881_Aki_TMTPro18x_K_F2 160.97 131.16 1328700 979800 1040100 1130800 1541600 1631900 1325100 1304600 1829100 1542600 1914200 1932300 1796100 1642600 1633900 1841600 2050100 1765700 1225600 898730 1088500 1136100 1556900 1605000 1363900 1361600 1837100 1559100 1954600 1934400 1830300 1713400 1688300 1842900 1955600 1678900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5963999999.999999 27298 368 25638 51274;51275 41364;41365 41364 2 9606 Homo sapiens 0.0036150469009044173 TNQFSVTR Unmodified 951.47739 0.47739386 1917 A6PVJ3;H0Y621;A2TJK5;Q5JWS0;H0Y5K5;Q9Y282;Q9Y282-3;O95330;Q5JWS1;H0Y802;Q5JWS2;H0Y6Z0 ERGIC3 Endoplasmic reticulum-Golgi intermediate compartment protein 3 yes no 0 0 0 5.33 3.09 1 1 1 37.636 37.652 2 0.0022708 9040 20230619_1880_Aki_TMTPro18x_K_F1 129.38 113.23 93293 68536 77421 90077 117050 121570 123730 133230 173210 101030 113140 124250 117550 101370 115390 120980 135720 117270 86089 62948 80657 89604 118690 120790 125790 134370 171020 104650 119180 124330 119800 106320 118510 121050 129530 111490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116330000 27299 1917 25639 51276;51277;51278 41366;41367 41366 2 9606 Homo sapiens -0.00028573767701800534 TNQIGTVNDR Unmodified 1116.5523 0.55234972 2078 P53990-4;P53990;P53990-2;A8K5S3;P53990-5;H3BMU1;P53990-3;B4DLP1;H3BUI0;B4DM80;H3BQF7;J3KR23 IST1 IST1 homolog yes no 0 0 0 3.5 0.5 1 1 33.874 33.933 2 1.5978E-09 7094 20230619_1883_Aki_TMTPro18x_K_F4 205.32 134.79 59138 38425 78286 72908 97958 111660 68313 85769 90473 82171 117150 131080 104910 109170 117710 52996 137900 134460 54760 35478 78182 71233 99421 109290 71388 89263 91932 84752 118520 129930 108210 110370 120210 58945 131720 126860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67550000 27300 2078 25640 51279;51280 41368;41369 41369 2 9606 Homo sapiens -0.001264360271534315 TNQLQYMQNVVVK Unmodified 1563.8079 0.80791248 517 A0A024R8H6;Q15059;A0A140F1N4;Q15059-2;A9J571 BRD3 Bromodomain-containing protein 3 yes no 0 0 0 3 0 1 55.936 55.977 3 4.2122E-05 16764 20230619_1882_Aki_TMTPro18x_K_F3 113.69 92.741 42993 38223 41083 43726 38990 48271 44530 40602 54685 40083 44916 41263 43156 37824 35800 46101 43855 43675 39761 35032 41883 43769 40873 48288 44883 42017 54689 40615 46431 41749 43771 39559 37036 46030 41881 41509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111420000 27301 517 25641 51281 41370 41370 1 9606 Homo sapiens 0.048560840459003884 TNQYGILFK Acetyl (Protein N-term) 1124.5866 0.58660996 3059 H0YN81;Q9GZS3;H0YMF9;H0YL19;H0YM76;B4E387 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes no 1 0 0 4.5 3.5 1 1 63.069 63.082 2 0.00096531 19130 20230619_1888_Aki_TMTPro18x_K_F8 54.408 40.9 141830 94237 124030 126610 125470 143730 139860 139160 161120 122030 139270 141540 140550 125090 150420 168690 156500 149730 130850 86612 127520 125420 130700 143900 140840 142040 161920 124910 144030 142360 143940 131810 153220 167710 149640 142440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 408770000 27302 3059 25642 51282;51283 41371;41372 41372 2 9606 Homo sapiens 0.0293001213176467 TNRPPLSLSR Unmodified 1139.6411 0.64110515 32 Q0QEW2;H0YHA7;A0A024QZD1;J3QQ67;Q07020-2;Q07020;G3V203;F8VUA6;F8VYV2;B4DDY5;A0A075B7A0 RPL18 60S ribosomal protein L18 yes no 0 0 1 4.5 0.5 1 1 35.73 35.799 3 0.00024694 7822 20230619_1885_Aki_TMTPro18x_K_F5 119.45 92.486 376350 353750 318310 289180 452430 568730 435240 436570 587940 62263 64791 66243 62585 58781 141320 76376 82272 66604 347880 323300 330150 301330 459840 550820 444010 444900 567740 84229 91186 67188 67965 61765 138690 76136 79180 63422 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1563799999.9999998 27303 32 25643 51284;51285 41373;41374 41374 2 9606 Homo sapiens 0.07687024003189435 TNSCPLCR Unmodified 1006.4324 0.43243428 2735 C9J1C6;Q9P0P0 RNF181 E3 ubiquitin-protein ligase RNF181 yes no 0 0 0 7 0 1 32.483 32.57 2 0.0081338 6367 20230619_1887_Aki_TMTPro18x_K_F7 105.57 68.547 15585 7388.2 15025 14727 16887 23743 19773 12939 18026 17258 23124 18364 23053 19529 19173 11444 20802 17699 14369 6838.9 15345 14365 17503 23050 19702 14099 18654 17264 23448 18629 23338 19691 19609 12012 19866 16756 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11396000 27304 2735 25644 51286 41375 41375 1 9606 Homo sapiens -0.07052463896911831 TNSTFNQVVLK Unmodified 1249.6667 0.6666512 32 Q0QEW2;H0YHA7;A0A024QZD1;J3QQ67;Q07020-2;Q07020;G3V203;F8VYV2;B4DDY5;A0A075B7A0 RPL18 60S ribosomal protein L18 yes no 0 0 0 2.2 0.748 1 2 2 51.481 51.525 2;3 1.4553E-16 15089 20230619_1881_Aki_TMTPro18x_K_F2 246.63 172.7 611850 544330 595620 599900 622380 699850 704920 622420 632050 801660 857870 792410 876480 732710 702840 862370 863070 894060 565950 498720 606900 602780 646360 698540 703820 646180 657710 800060 869800 803080 885590 764810 727490 865830 824440 848730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2219400000 27305 32 25645 51287;51288;51289;51290;51291 41376;41377 41376 2 9606 Homo sapiens 0.05180453734942603 TNSTFNQVVLKR Unmodified 1405.7678 0.76776222 32 Q0QEW2;H0YHA7;A0A024QZD1;J3QQ67;Q07020-2;Q07020;G3V203;F8VYV2;B4DDY5;A0A075B7A0 RPL18 60S ribosomal protein L18 yes no 0 0 1 4.5 0.5 1 1 45.282 45.343 3 4.9973E-13 11781 20230619_1885_Aki_TMTPro18x_K_F5 196.7 157.55 292210 313880 333360 258330 341320 231380 302630 305770 200180 254590 255700 144860 170740 109950 289810 119290 114620 66695 271040 286750 334650 265720 351300 238460 304550 305800 212240 256360 255560 151050 182090 115250 281980 117390 111030 64080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 456200000 27306 32 25646 51292;51293 41378 41378 1 9606 Homo sapiens 0.08110905437638394 TNVLGHLQQGGAPTPFDR Unmodified 1906.965 0.96495848 3469 P17858;P17858-2;Q7L2M7;Q9BSP4;B3KNQ7 PFKL ATP-dependent 6-phosphofructokinase, liver type yes no 0 0 0 2 0 1 50.171 50.222 3 3.5439E-30 14527 20230619_1881_Aki_TMTPro18x_K_F2 180.76 159.52 49951 42383 48349 49127 46603 53355 50198 52988 52518 57640 63187 58687 62878 60067 59823 71197 72126 74870 46187 38857 49226 49131 48656 53628 50511 54273 53818 58031 64289 59624 64093 62483 61629 71538 68909 71063 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114700000 27307 3469 25647 51294 41379 41379 1 9606 Homo sapiens 0.04775460189785008 TNVVTMPTAHPR Oxidation (M) 1338.6714 0.671419 1505 Q13428-4;A0A3B3IS06;Q13428-3;Q13428;Q13428-7;Q13428-6;Q13428-8;Q13428-2;E7ETY2;A0A6I8PRA0;B4DRA2;Q59FZ2 TCOF1 Treacle protein yes no 0 1 0 7.5 0.5 1 1 31.476 31.53 3 5.0955E-05 6148 20230619_1888_Aki_TMTPro18x_K_F8 115.57 68.273 18593 16000 18860 20421 26925 25862 23394 26619 28739 20828 24143 21317 24076 19964 22901 19305 26470 20460 17200 14682 19263 20331 27210 25761 23959 26970 28770 21387 24966 21584 24519 20608 23481 19492 25251 19443 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46439000 27308 1505 25648 51295;51296 41380;41381 41381 1004 2 9606 Homo sapiens 0.015630146060402694 TNYAVER Unmodified 851.41373 0.41373097 3820 Q12788;H3BN88 TBL3 Transducin beta-like protein 3 yes no 0 0 0 3.5 0.5 1 1 33.055 33.119 2 0.056767 6779 20230619_1883_Aki_TMTPro18x_K_F4 83.168 33.334 54753 29079 68947 66197 96095 96365 72559 95546 92244 54051 73270 77734 62381 59077 78734 33228 85670 69935 50627 26960 69231 64140 96953 95066 75189 96469 91976 57606 75653 77153 64845 60201 79889 36021 81792 66093 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40871000 27309 3820 25649 51297;51298 41382;41383 41383 2 9606 Homo sapiens -0.01791934204811696 TNYDIVVR Unmodified 978.51345 0.51344502 3932 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 yes yes 0 0 0 5.5 0.5 1 1 44.175 44.26 2 0.0020288 11314 20230619_1886_Aki_TMTPro18x_K_F6 133.23 86.168 299210 238430 282240 318960 289480 322750 340680 308370 372350 360800 388900 372980 413800 328570 346480 424240 429870 390370 276500 218960 288480 315460 301540 325710 341460 317580 378170 362250 399160 376750 418250 345500 358520 422670 410220 371280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 427170000 27310 3932 25650 51299;51300 41384;41385 41385 2 9606 Homo sapiens 0.02332883409144415 TNYHLQR Unmodified 930.46716 0.46716353 2286 Q8IWK7;Q15552;Q4FD37;Q8TDH4;B2RAI2;Q9UQR1 ZNF148;tb protein Zinc finger protein 148 yes no 0 0 0 7 0.816 1 1 1 29.405 29.458 3 0.0031225 5513 20230619_1888_Aki_TMTPro18x_K_F8 117.16 83.082 51045 37472 46920 52788 67012 61326 61550 63419 80696 42346 43663 43531 40298 35058 55072 29124 50185 37516 47138 34443 48332 52149 67809 61424 62928 64072 79535 44026 46425 43832 41957 36140 55319 29924 47976 35590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22566000 27311 2286 25651 51301;51302;51303 41386;41387 41387 2 9606 Homo sapiens -0.0008513670228467163 TNYNDRYDEIR Unmodified 1457.6535 0.65352033 3722 P62424;Q9BY74;Q5T8U2 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 0 0 1 3 0.816 1 1 1 36.133 36.186 3 1.7206E-12 8013 20230619_1882_Aki_TMTPro18x_K_F3 193.94 172.07 336990 258200 308490 333660 340770 395060 357130 361750 431310 428580 429290 428150 465840 402530 373390 500490 454590 435700 311260 237070 316410 331510 352170 393990 361460 373590 435260 429620 442040 433920 470000 421120 386500 497410 434030 414590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2643000000 27312 3722 25652 51304;51305;51306 41388;41389;41390 41389 3 9606 Homo sapiens -0.05700029115109828 TNYNDRYDEIRR Unmodified 1613.7546 0.75463136 3722 P62424;Q9BY74;Q5T8U2 RPL7A;RP-L7a 60S ribosomal protein L7a yes no 0 0 2 5.57 1.4 2 2 1 1 1 32.732 32.79 3;4 2.4191E-13 6614 20230619_1883_Aki_TMTPro18x_K_F4 180.84 154.71 117800 114360 118920 117780 135900 110070 122210 131670 125800 135590 135040 106370 137130 105330 127540 150090 149020 116430 109060 104690 120900 118670 139110 112560 124210 133080 128430 135880 138030 109440 139380 111080 131160 148160 142150 111070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1821399999.9999998 27313 3722 25653 51307;51308;51309;51310;51311;51312;51313 41391;41392;41393 41391 3 9606 Homo sapiens -0.02769577412414037 TPAALAALSLTGSGTPPTAANYPSSSR Unmodified 2558.2976 0.29764517 1230 Q9UQ35;A0A140VK53;O60382;I3L3Q8 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 5 0 1 61.323 61.373 3 4.0163E-39 18519 20230619_1885_Aki_TMTPro18x_K_F5 211.71 211.49 11951 10924 10902 13830 12740 12009 11698 11232 15002 13235 14613 15503 14997 15672 18018 16895 16476 23826 11051 10021 11203 13700 13052 12271 11957 11592 15078 13346 15042 15643 15456 16224 18180 17347 15830 22530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113100000 27314 1230 25654 51314 41394 41394 1 9606 Homo sapiens 0.08082825222209067 TPADCPVIAIDSFR Unmodified 1560.7606 0.76062794 1425 A0A8I5KU76;A0A384MEE7;Q9BS26;A0A8I5KW59 ERP44 Endoplasmic reticulum resident protein 44 yes no 0 0 0 5.33 0.471 2 1 58.418 58.48 2;3 2.3914E-06 17457 20230619_1886_Aki_TMTPro18x_K_F6 160.52 144.66 52281 49140 51758 49195 54595 59476 59956 59724 67590 60547 69247 69187 76550 65736 67328 79945 75868 86841 48384 44977 52651 49856 56625 59396 60384 61012 68469 61426 71287 69772 77467 68680 69171 80454 72584 82369 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209570000 27315 1425 25655 51315;51316;51317 41395;41396 41396 2 9606 Homo sapiens 0.002678047748759127 TPADIYR Unmodified 834.42357 0.42356738 3329 Q6NX55;O94763-3;O94763;Q96C15;O94763-2;O94763-4;I3L280 C19orf2;URI1 Unconventional prefoldin RPB5 interactor 1 yes no 0 0 0 4.5 0.5 1 1 40.04 40.106 2 0.06574 9431 20230619_1885_Aki_TMTPro18x_K_F5 79.116 18.328 223910 169090 217750 218150 253670 249210 241960 247880 297340 225970 263780 247490 235530 207840 246980 240240 268180 234790 206900 155250 222200 216710 260180 249670 246380 252720 298180 230320 270900 249040 241910 217350 252060 240660 256150 223190 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 400530000 27316 3329 25656 51318;51319 41397 41397 1 9606 Homo sapiens -0.0002674619944400547 TPAEASSTGQTGPQSAL Unmodified 1601.7533 0.75329395 1298 B0S7P4;A0A1U9X819;Q9Y676;A0A0G2JIC6 MRPS18B 28S ribosomal protein S18b, mitochondrial yes no 0 0 0 3 0 1 46.18 46.258 2 0.0085493 12420 20230619_1882_Aki_TMTPro18x_K_F3 93.258 62.184 6340.7 5860.1 6427.6 6808 6978.8 7952.9 9226.8 6365.6 11159 8020.3 7675.6 9517.8 9348.8 8195.4 6293.1 8361.4 10614 9626.1 5868.4 5371 6535.6 6812.2 7268.5 7919.9 9219.8 6666.8 11111 8072.8 8121.4 9540 9351.3 8506.1 6701.8 8465.2 10107 9133.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20799000 27317 1298 25657 51320 41398 41398 1 9606 Homo sapiens -0.023512562917858304 TPAEQLLSK Unmodified 985.54441 0.5444108 1683 A0A8Q3SIG7;A0A8V8TM87;A0A8V8TM61;F5H578;A0A7N4I394;O75400-2;O75400;O75400-3;Q05C41;H0YG38 PRPF40A Pre-mRNA-processing factor 40 homolog A yes no 0 0 0 7.5 0.5 1 1 51.414 51.491 2 0.0026141 14224 20230619_1887_Aki_TMTPro18x_K_F7 114.5 85.753 132580 106110 127200 145520 137350 161900 145000 139570 174990 139710 133100 135970 142540 123630 133880 160730 155090 142360 122540 97470 129940 143860 142210 161900 146650 144170 174850 141170 138980 137830 144830 129860 137600 159820 148100 135450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 225430000 27318 1683 25658 51321;51322 41399;41400 41399 2 9606 Homo sapiens 0.05106036723395846 TPAILYTYSGLR Unmodified 1353.7293 0.72925145 2481 Q8N684-3;Q8N684;Q8N684-2;B4DGF8;F5H669;F5H047;F5H6M0;J3QT54;C9J323;F5H5B7;F5H1W4;C9JM38;F5GXA3;F5H6A8;F5H6P5;F5H2K8;C9J286 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 0 0 0 5 0 1 58.659 58.715 3 0.00017383 17370 20230619_1885_Aki_TMTPro18x_K_F5 82.85 69.45 31883 24023 26922 29185 27184 36443 33480 31522 40744 30537 25995 25172 29911 23733 30306 33321 23603 23983 29429 22044 27790 29142 28457 36170 33598 32516 40489 30780 27539 25763 30409 25034 30459 32803 22651 22877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47811000 27319 2481 25659 51323 41401 41401 1 9606 Homo sapiens 0.06653599803121324 TPAIPTAVNLADSR Unmodified 1424.7623 0.7623425 1230 Q9UQ35;A0A140VK53;O60382;I3L3Q8;A0AUK8 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 7.5 0.5 1 1 52.374 52.45 2 4.0523E-08 14584 20230619_1888_Aki_TMTPro18x_K_F8 152.23 107.88 81296 67245 72112 85358 73232 93191 79736 82870 94469 94245 102140 102010 107930 87978 94003 116320 99117 108520 75107 61711 74127 84789 76294 93370 80502 85683 95721 94881 104680 102780 109270 92713 96246 115930 94850 103120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137910000 27320 1230 25660 51324;51325 41402 41402 1 9606 Homo sapiens 0.06695181855184273 TPALIALR Unmodified 853.53854 0.53853756 3794;3964 Q04828;H0Y804;B4DK69;P52895;Q2XPP3;S4R3Z2;A0A0A0MSS8;P42330;P42330-2 AKR1C1;AKR1C2;AKR1C3 Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C3 no no 0 0 0 3.5 0.5 1 1 50.931 50.982 2 0.021937 14582 20230619_1882_Aki_TMTPro18x_K_F3 87.284 18.799 150980 135070 142710 199580 430710 714720 842030 773660 1392000 82836 79042 114010 138720 106070 157660 131440 120220 124620 139620 124130 151350 202870 438350 683690 839440 767130 1329600 124320 145710 114660 141190 111040 157770 131390 115420 118420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 186020000 27321 3794;3964 25661 51326;51327 41403 41403 1 9606 Homo sapiens 0.10590983002362009 TPALVFEHVNNTDFK Unmodified 1730.8628 0.86278482 1352 Q5U5J2;P68400;A0A2R8Y5A0;B2R6D7;E7EU96;Q2I0Y7;A0A2R8YD58;B5BUH5;A0A2R8YF43;Q8NEV1;A0A2R8Y4D6;A0A2R8YDY7;A0A2R8Y4H0;A0A2R8YEW1;V9GYA2 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 yes no 0 0 0 7 0 1 55.354 55.415 4 1.6992E-06 15962 20230619_1887_Aki_TMTPro18x_K_F7 120.54 98.009 33884 25861 31690 36342 29819 38784 35276 36936 42965 39904 42871 44223 45893 37550 42111 50980 46849 49305 31302 23766 32382 35858 31330 38965 35499 37942 43322 40306 44131 44490 46558 39665 43200 50892 44796 46839 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51094000 27322 1352 25662 51328 41404 41404 1 9606 Homo sapiens 0.026587941181787755 TPAQECKPADFEVPETFLNR Unmodified 2348.1107 0.11069602 1509 A0A3B3ISH6;Q5HYL4;Q86U38-2;Q86U38 DKFZp686E1893;NOP9 Nucleolar protein 9 yes no 0 0 1 6 0 1 57.015 57.087 3 6.2129E-10 16903 20230619_1886_Aki_TMTPro18x_K_F6 129.12 118.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27323 1509 25663 51329 41405 41405 1 9606 Homo sapiens -0.009434898669951508 TPAQYDASELK Unmodified 1221.5877 0.58773217 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;A6NMY6;H0YMU9;H0YM50;B4DNH8;H0YNB8;H0YKS4;H0YNP5;A0A7I2V4P4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 3.8 0.748 2 2 1 46.842 46.906 2;3 4.6228E-09 12407 20230619_1885_Aki_TMTPro18x_K_F5 147.71 93.099 1193600 871580 1014100 1089100 1308300 1469500 1268000 1108800 1432300 1540200 1786300 1810400 1713100 1473200 1536700 1768200 1875100 1790000 1101600 800120 1050000 1086600 1335300 1448800 1285700 1169600 1464300 1541900 1812800 1814100 1742600 1546100 1585600 1772800 1790200 1700200 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 8806100000 27324 368 25664 51330;51331;51332;51333;51334 41406;41407;41408;41409 41409 4 9606 Homo sapiens -0.014198182900145184 TPASPVVHIR Unmodified 1075.6138 0.61382777 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;M0R1W6;M0QYL7;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 0 0 2.67 1.7 1 1 1 36.671 36.721 3 3.3319E-07 8156 20230619_1885_Aki_TMTPro18x_K_F5 177.06 131.05 1385800 973460 1287000 1290100 1707300 1754000 1648300 1667800 1976500 1490100 1752400 1706100 1769600 1454100 1884000 1240600 1951100 1472700 1279600 894350 1321900 1282900 1738100 1736400 1675100 1704500 1984500 1522900 1809500 1713100 1810600 1497400 1913500 1265600 1862800 1398100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2416700000 27325 1455;1520 25665 51335;51336;51337 41410;41411;41412 41412 3 9606 Homo sapiens 0.07904540462777732 TPATAPVPAR Unmodified 979.54508 0.5450795 110 F5H8D7;A0A024R0S8;Q59HH7;P18887;B4DEB2 XRCC1 DNA repair protein XRCC1 yes no 0 0 0 6.5 0.5 1 1 35.193 35.255 2 9.1589E-05 7393 20230619_1887_Aki_TMTPro18x_K_F7 143.45 113.64 59995 39098 52957 62858 73929 79087 70470 68618 93628 68746 78190 84615 82726 74131 73618 65211 91077 86160 55352 36015 54758 61684 75074 78471 71932 70835 93384 70019 81182 84774 83901 76349 75929 66887 86939 81631 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77964000 27326 110 25666 51338;51339 41413 41413 1 9606 Homo sapiens 0.054488761630864246 TPATTPEAR Unmodified 942.47706 0.47705951 4259 Q8NI27;A0A0C4DG98;H7C477;H0Y7U4;Q8NI27-2 THOC2 THO complex subunit 2 yes no 0 0 0 2.5 0.5 1 1 29.958 30.04 2 0.033563 5675 20230619_1882_Aki_TMTPro18x_K_F3 69.954 54.872 7298.6 5455.2 7451.5 9470.3 11814 12847 8043.2 10115 11353 6049.6 10440 14591 11378 11316 11167 5886.5 11424 10812 6746.3 5027.3 7632.6 9265.7 11830 12664 8435.4 10413 11323 6601.6 10824 14295 11582 11486 11343 6299.9 10923 10219 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13609000 27327 4259 25667 51340;51341 41414 41414 1 9606 Homo sapiens 0.0035200651242348613 TPCEEILVK Unmodified 1087.5583 0.5583463 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 FLNA;FLJ00119 Filamin-A yes no 0 0 0 3.5 0.5 1 1 50.796 50.847 3 0.0037121 14319 20230619_1883_Aki_TMTPro18x_K_F4 67.897 43.122 430580 345830 383950 425540 426400 512180 466460 445560 578050 521630 555670 533080 596980 452780 487500 646310 591240 554460 397740 317300 394880 424260 441220 509720 471360 461840 581560 523650 572690 538270 602500 480030 504250 640750 564440 527740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 319380000 27328 3484 25668 51342;51343 41415 41415 1 9606 Homo sapiens 0.018069461601498915 TPCNAGTFSQPEK Unmodified 1435.6402 0.64017845 1173 J3QT28;A0A140VJF3;O43684-2;O43684;B4DDM6;J3QSX4 BUB3 Mitotic checkpoint protein BUB3 yes no 0 0 0 6.5 0.5 1 1 42.844 42.929 3 3.6029E-06 10720 20230619_1886_Aki_TMTPro18x_K_F6 131.66 109.43 190230 145240 160120 202790 211450 218480 188630 204620 242050 219470 226930 237240 248250 223840 204230 240750 255800 214940 175590 133470 166150 200160 215010 219410 193180 210380 242990 221620 234490 239560 250730 232110 211470 240160 243970 204580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 622130000 27329 1173 25669 51344;51345 41416;41417 41416 2 9606 Homo sapiens -0.06021603218732707 TPCQQELDQVLER Unmodified 1614.7672 0.76716988 3471 P18065;C9JMY1;C9JW52 IGFBP2 Insulin-like growth factor-binding protein 2 yes no 0 0 0 3 0 1 52.924 52.983 2 1.8867E-07 15446 20230619_1882_Aki_TMTPro18x_K_F3 156.69 144.11 24647 15636 23066 28943 16096 25788 20646 16723 20582 36384 31686 41841 39938 29130 24641 46724 34829 43697 22747 14434 23500 28054 17458 26075 20566 18270 21493 35857 32399 41763 39742 31410 26015 46427 33287 41503 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81077000 27330 3471 25670 51346 41418 41418 1 9606 Homo sapiens -0.01562302064371579 TPDFHDK Unmodified 858.38718 0.38718187 1499 A0A3B3IRN8;A0A3B3ITX0;P24311 COX7B Cytochrome c oxidase subunit 7B, mitochondrial yes no 0 0 0 3 0 1 38.079 38.132 3 0.019962 8815 20230619_1882_Aki_TMTPro18x_K_F3 73.931 50.374 96768 68638 90078 96971 128440 130310 129270 115990 151700 97923 132890 124260 142710 106740 136390 99833 113140 117040 89353 63102 92687 95998 130340 128900 130900 119040 152310 100860 137620 124400 144890 110390 137310 101540 108510 110970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48953000 27331 1499 25671 51347 41419 41419 1 9606 Homo sapiens -0.0476762309614287 TPDTSTYCYETAEK Unmodified 1664.6876 0.68758215 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 3.2 0.748 1 2 2 45.746 45.81 2;3 1.0491E-12 12506 20230619_1881_Aki_TMTPro18x_K_F2 154.1 142.13 318050 254360 411260 313340 358570 302820 277440 310330 374610 387170 422450 465120 478580 401080 404180 485860 520470 518360 294770 233390 408380 311750 373660 307520 287960 318560 378300 389510 433850 466430 483190 420350 419160 488450 496840 492010 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1301800000 27332 630 25672 51348;51349;51350;51351;51352 41420;41421;41422 41420 3 9606 Homo sapiens -0.11817413529047371 TPDVLKK Unmodified 799.48035 0.48035398 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 1 4.5 3.5 1 1 43.477 43.482 3 0.026652 10878 20230619_1888_Aki_TMTPro18x_K_F8 63.486 20.459 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27333 2088 25673 51353;51354 41423;41424 41424 2 9606 Homo sapiens 0.07259301357089498 TPEASPEPK Unmodified 954.46583 0.46582612 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491;A0A7I2V4A5 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 2.5 0.5 1 1 36.976 37.03 2 0.0036175 8370 20230619_1882_Aki_TMTPro18x_K_F3 96.711 73.881 14752 10596 23786 24240 33715 36414 23082 32266 30835 22272 33303 38149 30391 31645 33236 14464 39408 39313 13700 9809.6 23559 23488 33934 35771 24161 32953 31040 23539 33964 37743 31287 31951 33979 16268 37645 37077 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13591000 27334 832 25674 51355;51356 41425;41426 41426 2 9606 Homo sapiens -0.013228155817046172 TPEDGDYSYEIIEK Unmodified 1657.7359 0.73591255 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 2.29 1.03 2 2 2 1 55.681 55.7 2;3 1.804E-16 16813 20230619_1881_Aki_TMTPro18x_K_F2 171.29 159.31 282620 219830 247760 267770 220530 241330 267910 260050 248910 334290 396920 370070 380340 326230 373020 410930 386100 461890 260980 201700 254280 266190 232460 246530 266990 266460 260750 334750 399420 372790 388290 342510 380410 414290 369820 437890 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1716899999.9999998 27335 630 25675 51357;51358;51359;51360;51361;51362;51363 41427;41428;41429 41428 3 9606 Homo sapiens -0.06664596617451934 TPEEGGYSYDISEK Unmodified 1573.6784 0.67839767 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 1.5 0.5 1 1 49.18 49.212 3 7.3602E-09 14023 20230619_1880_Aki_TMTPro18x_K_F1 158.58 127.58 549180 401720 485860 548070 482990 534280 488670 480360 503660 730370 907760 952960 845290 823360 764300 871480 988050 1101800 506990 369130 499080 541100 502200 540080 493360 501440 528930 731120 909830 952740 861560 855880 791590 887550 943980 1043700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 759990000 27336 630 25676 51364;51365 41430;41431 41430 2 9606 Homo sapiens -0.0854943882304724 TPEEIRK Unmodified 871.47633 0.47633123 2881 E5RJR5;E5RI56;P63208;E7ERH2;F8W8N3;P63208-2 SKP1 S-phase kinase-associated protein 1 yes no 0 0 1 5 0 1 35.662 35.752 3 0.04321 7845 20230619_1885_Aki_TMTPro18x_K_F5 60.972 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27337 2881 25677 51366 41432 41432 1 9606 Homo sapiens 0.03545211863388431 TPEELFHPLGADSQV Unmodified 1638.789 0.78895118 2426 B3KVN0;B4DKW1;Q59GX2;P11166 SLC2A1 Solute carrier family 2, facilitated glucose transporter member 1 yes no 0 0 0 3 0 1 60.573 60.602 3 0.0088366 18664 20230619_1882_Aki_TMTPro18x_K_F3 65.805 52.142 21862 15184 16569 21218 19181 21841 22000 18874 19316 22748 23124 26790 25316 23673 23014 28021 23268 31132 20155 13959 17341 20926 19800 21965 21930 19607 20001 22901 23672 26900 25670 24744 23488 28247 22315 29508 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26081000 27338 2426 25678 51367 41433 41433 1 9606 Homo sapiens -0.004891740441507864 TPEEYPESAK Unmodified 1149.519 0.51898391 2229 B2R644;O94760;B4E3V1;B4DYP1;B4DGT0;O94760-2 DDAH1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 2.5 0.5 1 1 41.025 41.091 2 7.1924E-06 10301 20230619_1881_Aki_TMTPro18x_K_F2 190.02 157.8 80378 52171 83592 60670 45783 43624 85598 82305 91066 90975 110410 100230 114580 92640 82977 75020 125620 107940 74252 47885 83942 60471 51533 46327 84214 81646 93167 91719 112440 101050 115290 94958 87224 77554 119660 102240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91475000 27339 2229 25679 51368;51369 41434 41434 1 9606 Homo sapiens -0.049794825897151895 TPEFLRK Unmodified 889.50215 0.50215205 3510 Q53YD7;P26641;P26641-2;B4DUK7;B4DSR4 EEF1G Elongation factor 1-gamma yes no 0 0 1 2 0 1 43.916 43.999 3 0.041521 11689 20230619_1881_Aki_TMTPro18x_K_F2 66.682 34.727 227480 176420 180120 177710 164260 162610 165910 189860 261550 218180 231090 257830 260960 242970 166130 401300 400240 343280 209910 161600 186590 179350 172090 166380 170240 192800 259730 220290 239850 259780 261380 259260 184810 396690 380290 326870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107680000 27340 3510 25680 51370 41435 41435 1 9606 Homo sapiens 0.05298106105669831 TPEILTVNSIGQLK Unmodified 1511.8559 0.85590853 1900 A0PJK4;B3KTT0;Q8NFH3 NUP43 Nucleoporin Nup43 yes no 0 0 0 1.5 0.5 1 1 61.622 61.627 3 0.0010114 19321 20230619_1881_Aki_TMTPro18x_K_F2 80.746 64.522 313080 262830 313760 329930 285330 372680 333280 316190 240350 359840 326630 334160 391050 311850 368610 397960 351340 346230 289550 241160 318410 328200 300080 372170 330590 328160 254210 360310 334090 339670 395770 327020 374430 395580 336290 329420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106490000 27341 1900 25681 51371;51372 41436;41437 41436 2 9606 Homo sapiens 0.12045481237601052 TPELNLDQFHDK Unmodified 1455.6994 0.69940789 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2;A0A7P0Z484;A0A7P0TAR9;A0A7P0Z4H2;Q6ZP56;D6RFL1 CANX Calnexin yes no 0 0 0 4.5 1.12 1 1 1 1 51.312 51.372 3 1.9996E-10 14480 20230619_1886_Aki_TMTPro18x_K_F6 190.27 159.44 1450700 1113500 1316500 1432500 1263600 1425900 1550000 1606600 1779500 1682200 1675900 1819100 1842400 1577000 1613400 1950300 1885000 2098800 1339900 1022300 1348600 1420500 1325100 1446300 1553500 1630700 1795700 1700000 1732600 1832200 1864600 1654600 1661600 1961100 1802400 1991100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3454199999.9999995 27342 1700 25682 51373;51374;51375;51376 41438;41439;41440 41440 3 9606 Homo sapiens -0.010213839328798713 TPENHENLFLQPPK Unmodified 1662.8366 0.83657007 1947 A4FUT8;Q7LBC6;Q7LBC6-2 JMJD1B;KDM3B Lysine-specific demethylase 3B yes no 0 0 0 6 0 1 48.55 48.629 3 0.00071266 13277 20230619_1886_Aki_TMTPro18x_K_F6 85.837 74.146 28548 24565 28393 29314 31237 30199 31077 32243 38550 31710 36668 31698 33417 29190 33192 37534 32745 36928 26405 22526 28897 29235 32193 30532 31581 32781 38748 32088 37534 32131 34202 30632 33759 37537 31363 35065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50414000 27343 1947 25683 51377 41441 41441 1 9606 Homo sapiens 0.03166524946686877 TPEQCPSVVSLLSESYNPHVR Unmodified 2398.1587 0.15870885 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;Q05BX4;A0A7I2V4X0;A0A7I2YQI9 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 8 0 1 57.271 57.323 3 5.5963E-37 16684 20230619_1888_Aki_TMTPro18x_K_F8 227.64 213.36 23296 18278 23529 24515 23894 21152 24314 27015 23718 25810 24170 26935 28320 24773 19597 29071 29727 30429 21538 16787 23885 24207 24752 21790 24491 27158 24240 26168 24970 27216 28373 25852 20692 29192 28349 28885 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145390000 27344 832 25684 51378 41442 41442 1 9606 Homo sapiens 0.015555840530851128 TPESIVPIAPELQPSTSR Unmodified 1921.0157 0.015656649 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;A0A1U9XBD9;A0A1U9XBC3;Q14676-3 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 0 6 0 1 58.476 58.541 3 0.00012106 17568 20230619_1886_Aki_TMTPro18x_K_F6 86.222 64.447 30072 23686 26720 33954 25560 33597 31435 29358 39828 33249 30912 29291 34845 26333 28405 33366 34440 34927 27774 21770 27456 33417 26862 33881 31602 30405 39733 33295 32290 29820 35119 27658 29357 33488 32897 33155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107750000 27345 1308 25685 51379 41443 41443 1 9606 Homo sapiens 0.09198944724130342 TPESTKPGPVCQPPVSQSR Unmodified 2051.0106 0.010588046 1995 A8IK34;Q6AI12 ANKRD40 Ankyrin repeat domain-containing protein 40 yes no 0 0 1 8 0 1 39.283 39.27 3 8.0107E-05 9147 20230619_1888_Aki_TMTPro18x_K_F8 87.654 75.886 37708 24849 31284 28585 23805 25867 32236 28505 37633 32043 34728 32104 35416 29639 30728 38610 41410 35367 34776 22804 32183 28548 25564 26434 32182 29050 37891 32209 35776 32529 35912 31128 31959 38451 39476 33648 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18566000 27346 1995 25686 51380 41444 41444 1 9606 Homo sapiens 0.027123175898850604 TPETLVPTAPK Unmodified 1152.639 0.63903946 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;A0A1U9XBD9;A0A1U9XBC3;B4DYH4 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 0 7 0 1 49.77 49.854 3 0.0027535 13522 20230619_1887_Aki_TMTPro18x_K_F7 73.781 59.787 69159 61879 67152 69872 57021 69227 68413 69206 86741 67148 71861 72928 72333 58449 76235 75571 72225 70765 63971 56706 68251 69924 60417 70054 68898 70664 86664 68179 74473 73298 73975 61676 77227 75406 69133 67269 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50511000 27347 1308 25687 51381 41445 41445 1 9606 Homo sapiens 0.06882550474711024 TPETVVPTAPELQISTSTDQPVTPKPTSR Unmodified 3076.5928 0.59282414 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;A0A1U9XBD9;A0A1U9XBC3 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 1 7 0 1 55.078 55.138 4 5.5666E-09 15825 20230619_1887_Aki_TMTPro18x_K_F7 106.63 100.41 11096 9453.9 10880 11760 8725.8 11306 13722 12626 10596 11761 9397.5 8952.5 13859 10870 12007 12813 13205 14610 10261 8673.1 11048 11683 9370 11492 13448 12787 10936 11844 9896 9287.1 13911 11265 12312 12942 12632 13853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231440000 27348 1308 25688 51382 41446 41446 1 9606 Homo sapiens 0.13759143779634542 TPFLGDMAHIR Unmodified 1256.6336 0.63357693 4532 Q9H857-4;Q9H857;Q9H857-3;Q9H857-2;H7C519 NT5DC2 5'-nucleotidase domain-containing protein 2 yes no 0 0 0 1 0 1 51.08 51.08 3 0.015397 14791 20230619_1880_Aki_TMTPro18x_K_F1 64.121 48.231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27349 4532 25689 51383 41447 41447 1 9606 Homo sapiens 0.015525484112231425 TPFLLSGTSYK Unmodified 1212.639 0.63903946 3658 P55084-2;P55084;B5MD38;D6W539;C9JEY0;C9JE81;C9K0M0 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 3.5 0.5 1 1 58.703 58.706 3 3.5633E-09 17741 20230619_1883_Aki_TMTPro18x_K_F4 180.66 137.92 127790 111760 122930 137540 157820 184650 174540 186320 198440 150560 143480 137760 155130 125260 172120 172800 146910 145760 118170 102510 125940 137400 161720 183120 175690 189160 198510 153760 150340 140130 158720 132140 173340 171380 140790 138730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 325760000 27350 3658 25690 51384;51385 41448;41449 41449 2 9606 Homo sapiens 0.0412255047472172 TPGAATASASGAAEDGACGCLPNPGTFEECHRK Unmodified 3346.4401 0.44012179 3367 O96008;O96008-2;K7EJ57 TOMM40 Mitochondrial import receptor subunit TOM40 homolog yes no 0 0 1 5 0 2 46.464 46.541 4;5 4.0365E-31 12269 20230619_1885_Aki_TMTPro18x_K_F5 190.48 179.27 27319 21020 27376 29824 26665 30204 29724 29673 35485 33803 36940 31137 37375 33608 30899 37962 33121 36241 25252 19319 27810 29392 27848 30493 29978 30463 35876 33872 37804 31845 37833 34811 31698 37965 31690 34429 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56136000 27351 3367 25691 51386;51387 41450;41451 41450 2 9606 Homo sapiens -0.13924066222489273 TPGDFSYAYQKPEETTR Unmodified 1988.9116 0.91158551 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 1 6 0.707 1 2 1 47.775 47.856 3;4 1.591E-23 12586 20230619_1887_Aki_TMTPro18x_K_F7 205.31 186.27 319090 230010 301080 355430 289750 370030 316410 322560 350180 418080 510390 633700 480060 490650 543770 490460 566100 723470 294690 211670 307550 348560 303040 371720 318770 335550 361330 423790 515800 628150 494440 510650 552810 506060 542520 684110 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 953020000 27352 630 25692 51388;51389;51390;51391 41452;41453;41454;41455 41455 4 9606 Homo sapiens -0.043313821033962085 TPGNERPPR Unmodified 1022.5257 0.52574104 3761 P82673;H0YG82;P82673-2 MRPS35 28S ribosomal protein S35, mitochondrial yes no 0 0 1 5.5 0.5 1 1 23.16 23.214 3 0.0034652 3844 20230619_1885_Aki_TMTPro18x_K_F5 86.882 58.673 53323 36548 68664 72859 100090 102650 78199 97617 101040 60268 96985 108090 87213 87505 91612 44045 102380 96432 49373 33764 68962 70916 100820 101360 80867 99019 101310 64420 99354 106770 89620 88627 93397 48069 97812 91058 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80334000 27353 3761 25693 51392;51393 41456 41456 1 9606 Homo sapiens 0.015379198721802823 TPGNNLHEVETAQGQR Unmodified 1749.8394 0.83942362 330 E9PLI6;E9PS76;A0A024R5B9;Q8N9N8;E9PQD0;E9PS30 EIF1AD;MGC11102 Probable RNA-binding protein EIF1AD yes no 0 0 0 3.5 0.5 1 1 34.743 34.804 3 1.5173E-20 7430 20230619_1883_Aki_TMTPro18x_K_F4 190.28 167.47 31126 31305 31639 31785 28191 40003 30469 30275 38045 40011 51065 51386 46860 43638 49922 50958 58711 50607 28827 28650 32054 32179 29698 39600 30846 31868 38836 40268 51605 51398 48135 45627 51197 51073 56033 48101 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135450000 27354 330 25694 51394;51395 41457;41458 41458 2 9606 Homo sapiens -0.005502516664364521 TPGPGAQSALR Unmodified 1053.5567 0.55670682 1363 A0A2R8Y811;P62263;E5RH77 RPS14 40S ribosomal protein S14 yes no 0 0 0 6.5 1.12 1 1 1 1 35.418 35.469 2 0.00022159 7635 20230619_1888_Aki_TMTPro18x_K_F8 127.37 89.813 302590 236960 266170 264630 364260 408250 332310 336930 466310 150580 148610 122990 130240 110580 209650 148140 172960 93738 279440 217230 274890 266890 370130 400250 340750 344030 453810 162020 166600 125970 137440 116390 209390 145450 165300 89900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2438000000 27355 1363 25695 51396;51397;51398;51399 41459;41460 41460 2 9606 Homo sapiens 0.032070731863996116 TPGRPTSSQSYEQNIK Unmodified 1791.8751 0.87514042 2716 C9JEL3;B9A044;B8ZZ50;Q59FE1;Q53RG0;O60573-2;O60573 EIF4E2;tmp_locus_9 Eukaryotic translation initiation factor 4E type 2 yes no 0 0 1 8 0 1 37.957 37.943 3 0.0039171 8637 20230619_1888_Aki_TMTPro18x_K_F8 103.66 68.354 24673 20041 20095 23340 25470 28657 25217 26883 31540 28585 32084 28434 38456 28136 26736 37755 31523 31379 22778 18377 20895 23369 26050 28535 25636 27622 31793 28804 33131 28899 38459 29553 27719 37397 30113 29872 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27328000 27356 2716 25696 51400 41461 41461 1 9606 Homo sapiens 0.010877857906052668 TPGSLGSSASAGQAAASAPLPLESGELSR Unmodified 2668.3304 0.33040186 4476 Q9BZE9;Q9BZE9-2;Q9BZE9-3;J3QL04;J3QR12;Q9BZE9-4;J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 yes no 0 0 0 7 0 1 56.105 56.163 3 2.572E-09 16253 20230619_1887_Aki_TMTPro18x_K_F7 104.83 99.825 6149.3 5715.3 5690 4675.1 5450.9 5523.2 7548.7 6383 7020.4 5208.4 6767.1 7033.6 7568.7 5807.1 6479.4 8295.1 6700.3 9902.9 5687.4 5223.6 5809.6 4828.1 5730.6 5546.9 7469.9 6432.9 7162.6 5383.7 6992.6 7023.2 7643.1 6166.7 6631.5 8378.2 6430.9 9377.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20476000 27357 4476 25697 51401 41462 41462 1 9606 Homo sapiens 0.06296987554469524 TPGTGSLAAAVETASGR Unmodified 1544.7794 0.77944912 141 A0A024R1I3;Q96GD0 PDXP Pyridoxal phosphate phosphatase yes no 0 0 0 7.5 0.5 1 1 52.25 52.325 2 5.4198E-13 14628 20230619_1887_Aki_TMTPro18x_K_F7 175.29 156.96 58753 50160 53795 63101 40903 47933 54350 52495 55531 67652 67656 69628 67253 56137 62672 74358 71936 73350 54304 46022 54922 62461 43893 49730 54089 53758 57034 67581 68844 70132 68429 59318 64387 74338 68748 69674 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140850000 27358 141 25698 51402;51403 41463 41463 1 9606 Homo sapiens 0.028850576703234765 TPGTPGTPSYPR Unmodified 1229.6041 0.60405094 275;1599 A0A024R3Z1;A0A024R3Y8;P11137-4;A0A669KB77;P11137-3;P11137;A8K5Y1;A0A024R409;Q59FX9;P11137-2 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 0 7.5 0.5 1 1 38.57 38.596 2 5.1064E-07 8884 20230619_1888_Aki_TMTPro18x_K_F8 164.66 133.24 79383 50437 54863 59135 24755 52809 65329 61144 76964 71973 107620 131190 136380 108860 122630 128000 127760 138410 73113 46302 57385 58949 29460 54014 63895 62238 78868 73958 110400 129740 137560 114030 125250 128900 122260 131310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155240000 27359 275;1599 25699 51404;51405 41464;41465 41465 2 9606 Homo sapiens -0.001566923332575243 TPHPVLTPVAANQAK Unmodified 1542.8518 0.85182621 511 A0A8Q3SHZ4;A0A494C1F2;A0A024R8B6;P35658-2;P35658-4;P35658;P35658-3;P35658-5;Q7Z3C4;A0A494C104;H0Y837 NUP214;DKFZp686J0330 Nuclear pore complex protein Nup214 yes no 0 0 0 1.5 0.5 1 1 42.115 42.155 3 2.7512999999999998E-19 10786 20230619_1881_Aki_TMTPro18x_K_F2 213.18 186.51 57345 46159 53073 58969 66440 67526 63479 69479 60952 68890 72782 64757 65300 60706 72047 67539 65729 71312 52987 42367 54498 58610 67820 67687 64130 70798 62753 69500 73761 65820 67220 63105 72773 67993 62989 67672 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129410000 27360 511 25700 51406;51407 41466 41466 1 9606 Homo sapiens 0.102114365345642 TPHTPGTPK Unmodified 934.48723 0.48723027 275;1599 A0A024R3Z1;A0A024R3Y8;P11137-4;A0A669KB77;P11137-3;P11137;A8K5Y1;A0A024R409;Q59FX9;P11137-2 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 0 7.5 0.5 1 1 32.089 32.138 3 0.00018108 6390 20230619_1888_Aki_TMTPro18x_K_F8 128.6 82.474 52411 25897 58338 58116 47222 68055 58505 72068 64022 55723 96099 114540 90355 88185 100070 43508 101160 110410 48389 24014 58620 56128 50342 68039 58590 72898 66071 58958 96991 112580 92906 89479 101330 48382 96841 104130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 76795000 27361 275;1599 25701 51408;51409 41467;41468 41468 2 9606 Homo sapiens 0.0173661423766589 TPHVLVLGSGVYR Unmodified 1396.7827 0.78268401 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 5 0 1 47.394 47.471 3 4.8128E-06 12669 20230619_1885_Aki_TMTPro18x_K_F5 126.83 107.07 28169 23328 25184 26151 32688 32929 29600 32646 42252 26004 24811 23767 32404 22504 31819 27350 25712 28876 26026 21382 25945 26277 33283 32788 30406 33175 41600 26602 26608 24200 32767 23542 32004 27506 24682 27399 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77020000 27362 2980 25702 51410 41469 41469 1 9606 Homo sapiens 0.10016397305639657 TPIGSFLGSLSLLPATK Unmodified 1700.9713 0.97127264 1208 A0A140VJX1;A0A5F9ZHL1;P24752;A0A5F9ZHJ7;A0A5F9ZHH9;P24752-2;A0A5F9ZHL7;E9PRQ6 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial yes no 0 0 0 7 0 1 65.725 65.75 4 3.7107E-13 20427 20230619_1887_Aki_TMTPro18x_K_F7 147.12 108.76 31174 25056 28584 33839 32606 30047 31310 34633 35671 37685 41338 37763 41240 35044 41672 45797 40988 43234 28803 23012 29334 33397 33478 30789 31798 35143 36332 37914 42124 38273 42108 36805 42355 45694 39239 41083 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92753000 27363 1208 25703 51411 41470 41470 1 9606 Homo sapiens 0.1488258536860485 TPIIIIPAATTSLITMLNAK Unmodified 2081.217 0.21699899 1500 A0A3B3IRP5;Q6P1J9;A0A0S2Z5M9;A0A1B0GUB2 CDC73 Parafibromin yes no 0 0 0 7.5 0.5 1 1 67.405 67.425 3 8.7185E-08 20888 20230619_1888_Aki_TMTPro18x_K_F8 103.87 89.835 9651 9239.8 8732.8 9640.9 9315.2 10716 8747.2 11135 12869 10411 10813 10862 12281 13661 13151 12037 12106 12121 8926.5 8459.5 8960.7 9722.4 9628.7 10767 8986.2 11320 12791 10584 11259 11105 12550 13899 13294 12135 11593 11511 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12482000 27364 1500 25704 51412;51413 41471 41471 1 9606 Homo sapiens 0.21963917436323754 TPIQVLHEYGMK Oxidation (M) 1430.7228 0.72278587 3310 O75569-3;O75569-2;O75569;A0A7I2YQ87;A0A7I2V5H3;A0A7I2V2P4;F8WEG8;G5E9Q4;A0A7I2V5C2;A0A7I2V3L6;C9JMM3 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes no 0 1 0 1 0 1 51.086 51.086 3 0.001669 14745 20230619_1880_Aki_TMTPro18x_K_F1 75.669 63.693 39679 35621 43992 40187 45737 45092 52667 49775 53766 46534 55247 49455 53248 37870 48791 49697 53286 56481 36746 32643 44333 40305 47487 45355 52734 50441 54734 47287 56488 49713 54145 40118 49947 50124 50963 53563 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70825000 27365 3310 25705 51414 41472 41472 1942 1 9606 Homo sapiens 0.02465338580077514 TPIQVLHEYGMK Unmodified 1414.7279 0.72787125 3310 O75569-3;O75569-2;O75569;A0A7I2YQ87;A0A7I2V5H3;A0A7I2V2P4;F8WEG8;G5E9Q4;A0A7I2V5C2;A0A7I2V3L6;C9JMM3 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A yes no 0 0 0 2 0 1 56.008 56.026 3 7.8539E-06 17014 20230619_1881_Aki_TMTPro18x_K_F2 137.68 128.47 56593 51398 52057 61228 53907 65343 69256 70987 79168 69379 65081 67432 73529 65373 70494 72081 67678 77620 52331 47123 53361 61086 56319 65878 69229 72076 79516 70159 67835 68470 74651 67861 71593 72638 64850 73629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49782000 27366 3310 25705 51415 41473 41473 1 9606 Homo sapiens 0.037096424427090824 TPIVGQPSIPGGPVR Unmodified 1473.8304 0.83036248 2780 CON__P12763 yes yes 0 0 0 2.8 0.748 2 2 1 50.209 50.266 2;3 7.2364E-19 14504 20230619_1881_Aki_TMTPro18x_K_F2 204.31 189.87 + 163290 260690 312670 165660 918790 1023900 573200 596700 1108300 322510 554840 818090 298770 357870 556120 338210 479810 673000 153030 237580 313590 186490 897920 960430 613460 630920 1073800 357400 586040 791360 326230 382830 555650 359590 461150 634970 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7506099999.999999 27367 2780 25706 51416;51417;51418;51419;51420 41474;41475;41476 41474 3 9606 Homo sapiens 0.11240051505819793 TPLEELCLQIK Unmodified 1342.7166 0.71663786 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5;E7EWK3;H7C5F5 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 0 0 7 0 1 62.333 62.368 2 0.0019029 18868 20230619_1887_Aki_TMTPro18x_K_F7 119.68 81.324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27368 4503 25707 51421 41477 41477 1 9606 Homo sapiens 0.0589882034855691 TPLEHIFR Unmodified 1011.5502 0.55016488 2651 B4E2S3;C9JWQ9;F8WAR1;C9JRN3;C9JHG2;G3XAJ6;B4DVC8;Q8N5I0;Q14699 RFTN1 Raftlin yes no 0 0 0 1 0 1 47.229 47.229 3 0.0024067 13247 20230619_1880_Aki_TMTPro18x_K_F1 104.44 62.561 17641 14928 16270 12668 16272 23872 14308 15557 19523 21753 18393 15813 22741 16963 15780 21379 20312 17564 16305 13652 16623 13140 16912 23095 14713 16613 19577 21482 19087 16367 22728 17705 16449 21184 19372 16733 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10757000 27369 2651 25708 51422 41478 41478 1 9606 Homo sapiens 0.04485180025710633 TPLEPPPIVVVVMGPPK Unmodified 1769.0161 0.016114342 3897 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 0 0 0 3 0 1 64.591 64.623 3 2.7544E-05 20368 20230619_1882_Aki_TMTPro18x_K_F3 95.57 80.182 33532 29778 33448 32640 33753 35756 37579 37648 56848 42538 42514 44956 47853 40059 44320 55929 45754 47794 31022 27282 33984 32790 35161 35979 38252 38457 56213 42835 44541 45382 48507 42310 45275 55459 43777 45474 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26447000 27370 3897 25709 51423 41479;41480 41480 2 9606 Homo sapiens 0.16236692910251804 TPLHCVMEVDTER Unmodified 1585.7229 0.72286222 902 A0A090N7X1;A0A090N7Y2;Q9UG63;Q9UG63-2;C9JHK9;C9JZV3 ABCF2 ATP-binding cassette sub-family F member 2 yes no 0 0 0 4 0.816 1 1 1 44.26 44.325 3 1.332E-07 11430 20230619_1883_Aki_TMTPro18x_K_F4 145.52 134.25 56931 50851 59994 56272 55408 74435 67826 62997 76479 82326 85136 74299 91996 57229 63919 82665 81168 81910 52696 46591 60621 56642 58349 73610 67941 65654 77797 81914 87128 75244 92198 61051 66547 82556 77500 77804 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182080000 27371 902 25710 51424;51425;51426 41481 41481 1 9606 Homo sapiens -0.04657029482223152 TPLHEIALSIK Unmodified 1220.7129 0.71287311 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 1.5 0.5 1 1 53.271 53.287 3 2.8076E-06 15845 20230619_1881_Aki_TMTPro18x_K_F2 147.58 98.076 399540 346930 377050 441940 393120 425800 429940 432150 448220 470140 467220 452170 503400 400890 420940 506860 451510 477740 369420 318340 385520 438230 407990 431970 432030 442130 456590 472470 479910 458230 508490 420940 431670 505780 431890 453970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1569899999.9999998 27372 3811 25711 51427;51428 41482;41483 41483 2 9606 Homo sapiens 0.11134518637027213 TPLIDLCDGQADQAAK Unmodified 1714.8196 0.81959938 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;A0A0C4DG79;A0A494C0Y9 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 0 0 4.5 0.5 1 1 55.955 55.992 3 4.1835E-11 16651 20230619_1883_Aki_TMTPro18x_K_F4 153.94 139.91 93759 88392 102090 96918 99114 120230 122160 114260 136620 129970 127280 123710 145890 116410 127870 141040 142540 145300 86842 80966 102970 97535 103860 119670 122260 117550 138010 130350 131820 125650 147410 121680 131220 141540 136250 137950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204990000 27373 1839 25712 51429;51430 41484;41485 41484 2 9606 Homo sapiens -0.009217637214078422 TPLPPELADVQA Unmodified 1249.6554 0.65541781 3039 H0YC70;Q9HB72;Q9Y5V0 ZNF706 Zinc finger protein 706 yes no 0 0 0 3 0 1 62.193 62.222 2 5.8718E-05 19308 20230619_1882_Aki_TMTPro18x_K_F3 128 119.18 44842 38336 41977 38764 33867 36079 33506 36165 35181 50595 47603 37133 50928 42028 42981 55427 47651 49796 41454 35103 42725 39115 35808 36723 33909 37317 36320 49929 48324 38522 51481 43915 44174 55130 45561 47349 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326370000 27374 3039 25713 51431 41486 41486 1 9606 Homo sapiens 0.04057631640807813 TPLRPLDPTR Unmodified 1164.6615 0.66150624 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;A0A6Q8PFB2;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;C9J2Z7;C9K073 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 1 2 0.816 1 1 1 39.565 39.607 3 0.0021252 9603 20230619_1881_Aki_TMTPro18x_K_F2 89.032 64.194 532720 434610 490490 511750 460440 548420 570020 537360 574030 476100 482170 353690 468700 347990 470640 519690 479060 330320 492260 398570 501540 511070 483870 551480 568460 548160 580580 480900 497700 365180 478580 368270 479240 508800 457250 316290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 671450000 27375 1676;2901 25714 51432;51433;51434 41487 41487 1 9606 Homo sapiens 0.08576194662964554 TPLSDSGVTQR Unmodified 1159.5833 0.5833155 4562 Q9NPF4 OSGEP Probable tRNA N6-adenosine threonylcarbamoyltransferase yes yes 0 0 0 4.33 0.471 2 1 38.599 38.666 2 6.1384E-06 8969 20230619_1885_Aki_TMTPro18x_K_F5 156.16 142.58 40583 29503 35165 37682 44576 42582 48955 43772 57114 45885 52411 53767 55690 44901 57436 55363 62059 59847 37459 27090 36328 37449 45640 42730 49329 44706 57496 46520 54162 53937 56808 47176 58615 55725 59317 56804 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59325000 27376 4562 25715 51435;51436;51437 41488;41489 41489 2 9606 Homo sapiens 0.009907172870953218 TPLSEAEFEEIMNR Oxidation (M) 1680.7665 0.76650118 3000 F8WJN3;Q16630-3;Q16630;Q16630-2;B4DSU9 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes no 0 1 0 2 0 1 55.145 55.166 3 0.00011891 16675 20230619_1881_Aki_TMTPro18x_K_F2 95.345 85.658 31788 25146 28879 33622 30344 34789 31894 33078 38164 37762 34974 36335 38476 34708 40007 39074 34148 40897 29365 23093 29629 33263 31470 35044 32267 34036 38416 37875 36207 36889 39236 36084 40329 39304 32776 38800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59689000 27377 3000 25716 51438 41490 41490 1771 1 9606 Homo sapiens -0.04665141504096937 TPLSEAEFEEIMNR Unmodified 1664.7716 0.77158655 3000 F8WJN3;Q16630-3;Q16630;Q16630-2;B4DSU9 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes no 0 0 0 2.5 0.5 1 1 61.78 61.8 3 1.3806E-11 19172 20230619_1882_Aki_TMTPro18x_K_F3 151.74 119.67 35756 34098 41007 46208 29098 41417 41953 41031 45624 39486 35775 45168 44358 41510 42759 49827 46969 49169 33137 31298 41085 45596 31568 42205 41677 41929 45871 40174 37622 45457 44961 43356 43780 49882 44914 46700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 180230000 27378 3000 25716 51439;51440 41491;41492 41492 2 9606 Homo sapiens -0.034208376414653685 TPMCAHCNQVIR Oxidation (M) 1501.6588 0.65882218 758 A0A024RDE8;Q96HC4;B7Z481;B7Z8X5;Q96HC4-7;Q96HC4-4;H0Y8Y3;Q59FC9;Q96HC4-6;A0A0A0MSP3 PDLIM5 PDZ and LIM domain protein 5 yes no 0 1 0 7.5 0.5 1 1 30.304 30.363 3 0.01259 5508 20230619_1887_Aki_TMTPro18x_K_F7 62.408 42.026 7517.7 4452.6 5559.2 5556.1 6406.6 6480.5 7179.8 8164.4 6621.8 4735.5 7422.2 5214 6174.6 4664.7 5791.6 5643.7 5962.5 6554.1 6924.4 4091.5 5822.5 5535.9 6605.8 6521.3 7180.3 8127.9 6797.1 4983.2 7508.1 5267.2 6318 4885.9 5905 5706.8 5707.3 6213.3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8023800 27379 758 25717 51441;51442 41493;41494 41493 461 2 9606 Homo sapiens -0.07194088120127162 TPMENIGLQDSLLSR Unmodified 1672.8454 0.8454202 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 6 0 1 59.958 60.019 2 2.3497E-13 18125 20230619_1886_Aki_TMTPro18x_K_F6 164.53 138.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27380 1104 25718 51443 41495 41495 1 9606 Homo sapiens 0.03591130520885599 TPMGLLLEALGQEQEAGS Unmodified 1842.9033 0.90332901 20 B3KN29;A0A024QZ22;O60831;B4DFG8;A6NM71 PRAF2 PRA1 family protein 2 yes no 0 0 0 5.5 1.12 1 1 1 1 69.299 69.33 3 0.00023585 21854 20230619_1885_Aki_TMTPro18x_K_F5 61.692 57.788 5942.6 6325.1 7576.3 7416.1 5197.4 6641.8 10183 7729.8 8286.6 9105.1 9681.7 8106 10173 7879.3 10818 8426.9 9887.9 10011 5490.9 5787.7 7528.4 7393.8 5568.6 6799.3 9914.8 7710.2 8487.4 9095.7 9884 8270.2 10390 8172.5 10924 8434.3 9470.5 9491.5 3 4 5 5 4 5 5 4 4 5 5 5 5 5 5 4 5 5 18070000 27381 20 25719 51444;51445;51446;51447 41496;41497 41496 2 9606 Homo sapiens 0.01559347655665988 TPMYGSQTPMYGSGSR 2 Oxidation (M) 1750.7291 0.72906981 2503 B4DJK4;B4E0Q4;B4DZJ7;O00267-2;O00267 SUPT5H Transcription elongation factor SPT5 yes no 0 2 0 8 0 1 38.339 38.325 3 0.0087004 8810 20230619_1888_Aki_TMTPro18x_K_F8 61.821 57.191 7798.4 6268 9667.4 9701.9 9773 10278 9824.5 9939.6 10020 9814.1 12169 13021 7915.9 9536.5 10940 11223 13493 11671 7224.5 5765.8 9665.9 9519.9 10133 10339 9915.2 10177 10277 10020 12209 12953 8380.2 10025 11214 11276 12873 11087 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12881000 27382 2503 25720 51448 41498 41498 1532;1533 1 9606 Homo sapiens -0.11626556041323965 TPNEEIDR Unmodified 972.45124 0.45123869 4383 Q96N67;Q96N67-6;Q96N67-2;Q96N67-5;Q96N67-3;Q96N67-4;Q96N67-7;A0A1B0GUE9;A0A0C4DGY6;A0A1B0GVW2 DOCK7 Dedicator of cytokinesis protein 7 yes no 0 0 0 1 0 1 33.681 33.681 2 0.023311 7448 20230619_1880_Aki_TMTPro18x_K_F1 81.525 43.713 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27383 4383 25721 51449 41499 41499 1 9606 Homo sapiens -0.036088877298539046 TPNEEIDRQNDDQR Unmodified 1728.7663 0.76631825 4383 Q96N67;Q96N67-6;Q96N67-2;Q96N67-5;Q96N67-3;Q96N67-4;Q96N67-7;A0A1B0GUE9;A0A0C4DGY6;A0A1B0GVW2 DOCK7 Dedicator of cytokinesis protein 7 yes no 0 0 1 1 0 1 31.309 31.309 3 1.6534E-08 6526 20230619_1880_Aki_TMTPro18x_K_F1 151.07 118.79 12255 7956.9 11374 12000 13015 15260 11709 12186 16606 15971 19413 21163 19121 17694 15659 14927 20188 20822 11311 7323.7 11655 11822 13373 15106 12039 12763 16748 16101 19778 21113 19371 18219 16229 15380 19277 19712 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17706000 27384 4383 25722 51450 41500 41500 1 9606 Homo sapiens -0.0689142517971959 TPNEEIDRQNDDQRK Unmodified 1856.8613 0.86128127 4383 Q96N67;Q96N67-6;Q96N67-2;Q96N67-5;Q96N67-3;Q96N67-4;Q96N67-7;A0A1B0GUE9;A0A0C4DGY6;A0A1B0GVW2 DOCK7 Dedicator of cytokinesis protein 7 yes no 0 0 2 2.5 0.5 1 1 32.5 32.566 4 2.4602E-07 6704 20230619_1881_Aki_TMTPro18x_K_F2 124.25 103.01 32266 32761 33203 35270 48320 37718 40586 43151 46203 40032 51187 46471 48631 38806 47641 49171 60148 50017 29888 29997 33871 35467 48663 38134 41553 43615 46929 40819 52142 46667 49662 40838 49156 49290 57358 47534 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37005000 27385 4383 25723 51451;51452 41501 41501 1 9606 Homo sapiens -0.03287491708556445 TPNGVVLAPVQLGK Unmodified 1391.8136 0.81364979 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3 0 1 57.469 57.502 3 0.0097143 17383 20230619_1882_Aki_TMTPro18x_K_F3 65.956 45.652 64674 59115 65410 71050 57092 73090 69624 70302 80720 85212 81496 84315 82616 74923 83038 92827 82428 93105 59852 54201 66307 70804 60383 73675 69839 72416 81670 85286 83661 85310 84331 78525 84458 92983 78946 88389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50544000 27386 3881 25724 51453 41502 41502 1 9606 Homo sapiens 0.133415506198844 TPNKIDLYDVR Unmodified 1332.7038 0.70376498 1875 A0A994J595;P54289-4;P54289-5;P54289;Q9UIU0;P54289-3;P54289-2;A0A994J5M8;E7ERK3;Q9UDL7 CACNA2D1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 1 8 0 1 48.135 48.193 3 0.051017 12751 20230619_1888_Aki_TMTPro18x_K_F8 48.625 34.368 83230 84729 84496 74798 76582 72437 77855 88433 86881 88287 98860 67406 75089 59598 98603 73204 76565 59541 77088 77457 85523 76453 80113 73903 78791 89184 88461 88562 99654 69211 78440 62473 98493 72675 73352 56759 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24508000 27387 1875 25725 51454 41503 41503 1 9606 Homo sapiens 0.05072125280707951 TPNNPSCNADLINR Unmodified 1584.7315 0.73145307 1875 A0A994J595;P54289-4;P54289-5;P54289;Q9UIU0;P54289-3;P54289-2;A0A994J5M8;H0Y715;Q9UDQ3 CACNA2D1;WUGSC:H_DJ0560O14.1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 6 0 1 40.571 40.664 2 8.3508E-27 9797 20230619_1886_Aki_TMTPro18x_K_F6 209.19 190.44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27388 1875 25726 51455 41504 41504 1 9606 Homo sapiens -0.037523395213611366 TPNQDTEFLER Unmodified 1348.6259 0.62590859 4070 Q5U5Z3;Q9UL42 PNMA2 Paraneoplastic antigen Ma2 yes no 0 0 0 1.5 0.5 1 1 45.268 45.309 2 9.3522E-10 12232 20230619_1881_Aki_TMTPro18x_K_F2 193.3 158.91 133350 102180 114520 110490 58487 74143 100110 106980 107000 152460 123630 105620 166080 115340 115860 178320 127030 129520 123110 93656 117020 110540 66422 78526 98856 108220 109520 150110 127750 109800 165580 122080 119670 175260 121450 123530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 178130000 27389 4070 25727 51456;51457 41505 41505 1 9606 Homo sapiens -0.03445932375348093 TPPGLQHEYAAPADYFR Unmodified 1931.9166 0.91661131 1805 A0A8Q3WLQ2;B4E0K0;Q5JRG1;H7BYF2;A0A8Q3WKK3;A0A8Q3WKL7;A0A8Q3WKK5;B3KW23;A0A8Q3WKQ7;Q9BVL2-2;Q9BVL2-3;Q9BVL2 NUPL1 Nucleoporin p58/p45 yes no 0 0 0 6.5 0.5 1 1 50.641 50.721 3 2.5766E-06 13944 20230619_1887_Aki_TMTPro18x_K_F7 106.75 93.33 188450 163710 185650 205360 184100 203570 234260 184420 212710 220660 232770 248490 257270 212600 237220 245040 259670 291030 174300 150200 188960 203920 192580 205570 232530 190910 218770 221910 239110 249720 260800 222300 242860 248270 248450 275820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285350000 27390 1805 25728 51458;51459 41506 41506 1 9606 Homo sapiens -0.012070334501004254 TPPPVLIFAEK Unmodified 1210.6962 0.69616041 2396 B3KRK2;Q53HI2;Q9UJV9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes no 0 0 0 1 0 1 62.175 62.175 3 0.035341 19367 20230619_1880_Aki_TMTPro18x_K_F1 50.207 25.432 20672 17962 21816 22422 22028 22833 22575 24602 24988 26895 32422 35029 28784 26634 28610 28874 23576 32730 19131 16478 22070 22288 22865 23103 22824 25072 25616 27291 32775 34894 29484 27858 28825 29198 22669 31013 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32194000 27391 2396 25729 51460 41507 41507 1 9606 Homo sapiens 0.09924017751086467 TPPRPQGQRPEPENR Unmodified 1757.8921 0.89212789 140 B4DMD6;A9X3U0;A0A024R1F5;Q96GF1 RNF185 E3 ubiquitin-protein ligase RNF185 yes no 0 0 2 6 0 1 26.69 26.726 4 1.9357E-05 4637 20230619_1886_Aki_TMTPro18x_K_F6 112.5 92.376 16285 11290 15976 16813 25252 27203 23851 23941 25558 19729 23951 24356 20185 18971 22981 18849 28091 27670 15042 10387 16403 16652 25451 26634 24173 24561 25854 20314 24495 24330 20873 19744 23577 19449 26825 26189 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22537000 27392 140 25730 51461 41508;41509 41509 2 9606 Homo sapiens 0.0434975118703278 TPPSEEDSAEAER Unmodified 1416.6005 0.6004817 1650 A0A7I2V697;A0A7I2V4T9;A0A7I2V2U2;A0A7I2V5Z3;A0A7I2V588;O43765;K7EMD6 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 0 0 1 0 1 32.853 32.853 3 2.7569E-11 7099 20230619_1880_Aki_TMTPro18x_K_F1 172.92 157.95 19265 11388 23685 27080 31476 37458 30302 31112 36702 23157 37350 41152 32650 34117 34803 19654 37738 41721 17817 10561 23837 26153 32063 36901 30817 32013 36982 24406 38115 40691 33616 34652 35429 21272 36107 39378 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72492000 27393 1650 25731 51462 41510 41510 1 9606 Homo sapiens -0.09115451688421672 TPPTMEEILK Unmodified 1157.6002 0.60021112 1143 A0A0S2Z5U1;Q8N183 NDUFAF2 Mimitin, mitochondrial yes no 0 0 0 5.5 0.5 1 1 56.969 57.035 3 0.0034022 16845 20230619_1886_Aki_TMTPro18x_K_F6 64.439 38.396 79193 67422 85092 91623 62710 87556 80387 81365 93604 93296 96813 95264 111090 89460 74938 115180 113630 116320 73291 61912 85669 90465 67525 88645 80488 83898 94749 93722 99745 96474 111210 93863 79196 115270 108370 110460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 299100000 27394 1143 25732 51463;51464 41511 41511 1 9606 Homo sapiens 0.027715018486787812 TPPVFASEGK Unmodified 1031.5288 0.52876073 2443 B3KY42;Q96PZ0;Q96PZ0-2;B3KRB2 PUS7 Pseudouridylate synthase 7 homolog yes no 0 0 0 6.5 0.5 1 1 48.101 48.185 2 0.0078163 13066 20230619_1886_Aki_TMTPro18x_K_F6 79.489 52.235 72637 54521 68186 74613 81256 81191 75799 70332 74680 77147 81499 81616 80325 67136 76517 89646 93317 83654 67096 50093 69856 73758 83147 81366 76720 72816 76454 77733 83258 82184 81846 70913 78870 89351 89056 79554 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137470000 27395 2443 25733 51465;51466 41512 41512 1 9606 Homo sapiens 0.014257502063401262 TPQAPASANLVGPR Unmodified 1377.7365 0.7364621 1230 Q9UQ35;A0A140VK53;O60382;I3L3Q8 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 4.5 3.5 1 1 42.827 42.828 2;3 7.6584E-09 11354 20230619_1880_Aki_TMTPro18x_K_F1 193.49 166.89 124150 93305 113480 131850 132190 141840 141630 125250 158880 142840 161850 153240 167270 134430 141670 161560 152780 166740 114660 85758 116560 130050 136080 142270 142740 129650 160950 143790 166070 154510 169270 140770 145240 162160 146170 158270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 163070000 27396 1230 25734 51467;51468 41513;41514 41513 2 9606 Homo sapiens 0.062703324035283 TPQASTYSYETSDLCYTAEK Unmodified 2313.9947 0.99472279 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 4.5 0.5 1 1 53.021 53.067 3 3.6125E-11 15145 20230619_1885_Aki_TMTPro18x_K_F5 123.43 109.6 12335 7043 10917 13967 7793.7 9657.9 9944.8 10378 7700.6 13650 13736 14245 13963 13597 11892 17591 13953 20596 11374 6511.7 11179 13465 8405.6 10098 9847.6 10648 8235.3 13624 13823 14417 14156 14257 12278 17761 13376 19506 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 828530000 27397 630 25735 51469;51470 41515 41515 1 9606 Homo sapiens -0.10971478228339038 TPQEWAPQTAR Unmodified 1283.6258 0.62584901 955 A0A0A0MSK5;Q5JTV8;Q5JTV8-3;J3KN66;H0Y4R4;H0YD16;H0YDU3 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 0 0 0 6 0 1 42.488 42.583 2 0.0011772 10563 20230619_1886_Aki_TMTPro18x_K_F6 99.864 67.394 73101 52326 66579 76869 77204 92015 85148 88178 95483 90661 106290 94347 109020 77380 89778 83648 115290 102980 67491 48126 68415 75771 79638 91757 85720 90393 97091 91601 108560 95059 110170 80819 92993 85062 109970 97652 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86788000 27398 955 25736 51471 41516 41516 1 9606 Homo sapiens -0.004618875846745141 TPQGAVPAYLLDR Unmodified 1399.746 0.74596415 3357 Q5J7U2;O95478;A0A0A0MQZ6 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog yes no 0 0 0 8 0 1 53.864 53.935 2 0.0017864 15218 20230619_1888_Aki_TMTPro18x_K_F8 91.939 55.996 80321 68808 87409 88571 75313 89511 87444 88354 84926 103670 93781 104370 117610 90282 99035 116490 107850 118670 74347 63146 88034 87842 79516 90400 87443 90760 87147 103930 96924 105420 118330 95034 101620 116710 103180 112650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251220000 27399 3357 25737 51472 41517 41517 1 9606 Homo sapiens 0.0620810068908213 TPQGPPEIYSDTQFPSLQSTAK Unmodified 2391.1594 0.15942035 4680 Q9UKY7;A0A8I5KX85;Q9UKY7-2;D3DND1;D6R9V8;D6RFH2;Q9UKY7-3;D6RDN0 CDV3 Protein CDV3 homolog yes no 0 0 0 7 0.816 1 1 1 59.716 59.764 3 2.5371E-23 17647 20230619_1887_Aki_TMTPro18x_K_F7 177.32 156.96 131280 108550 123870 136480 100050 127690 118380 119990 140630 165700 162470 158120 179330 149590 131650 189450 165890 190700 121340 99603 126170 135410 106490 129590 119060 124370 143010 164760 166310 160610 180210 156740 136930 189630 158570 181020 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 489160000 27400 4680 25738 51473;51474;51475 41518;41519;41520;41521;41522 41520 5 9606 Homo sapiens 0.019487019737425726 TPQMPPTTPSSSFFTK Unmodified 1752.8393 0.83927219 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8 IFI16 Gamma-interferon-inducible protein 16 yes no 0 0 0 3.5 0.5 1 1 57.599 57.617 3 6.329E-11 17371 20230619_1882_Aki_TMTPro18x_K_F3 121.27 97.076 35242 26106 33734 38275 56924 69616 60080 60983 65835 58612 51548 51335 67808 53416 52640 71418 60044 64263 32556 24006 34797 38036 57429 67771 60527 62778 66200 59169 54266 52554 67953 56003 54309 71021 57407 61098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133000000 27401 2829 25739 51476;51477 41523 41523 1 9606 Homo sapiens -0.007033877107005537 TPQMPPTTPSSSFFTK Oxidation (M) 1768.8342 0.83418681 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8 IFI16 Gamma-interferon-inducible protein 16 yes no 0 1 0 3 0 1 53.446 53.498 3 0.00019801 15706 20230619_1882_Aki_TMTPro18x_K_F3 86.455 73.037 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27402 2829 25739 51478 41524 41524 1690 1 9606 Homo sapiens -0.019476915733093847 TPQQLWYTHEK Unmodified 1429.699 0.69901396 2929 E9PKP7;P17480-2;P17480;A0A994J4N4;B4DNQ1;O00164;Q05BZ1 UBTF Nucleolar transcription factor 1 yes no 0 0 0 4.5 3.5 1 1 46.496 46.519 3 1.7115E-05 12916 20230619_1880_Aki_TMTPro18x_K_F1 141.34 108.15 189950 149950 178520 199930 217080 279080 241840 250200 265930 229930 232990 223980 240310 216260 221590 245430 243950 242150 175520 137700 183090 198760 223430 275360 243100 256940 268170 233380 240870 227480 244250 224830 227020 245940 233180 230040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 307590000 27403 2929 25740 51479;51480 41525;41526 41525 2 9606 Homo sapiens 0.0013524113794574077 TPSAAYLWVGAGASEAEK Unmodified 1806.8788 0.87882882 2798 CON__Q3SX14 yes yes 0 0 0 7 0 1 60.323 60.365 3 1.9762E-06 17953 20230619_1887_Aki_TMTPro18x_K_F7 100.69 88.061 + 32357 28201 29341 33278 39494 55177 40212 42339 60088 40912 55199 58127 45187 41980 63208 41132 45174 64612 29909 25856 30253 33463 40375 53803 41102 44085 59797 41991 56473 57660 47295 43800 62848 42729 43531 61048 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29655000 27404 2798 25741 51481 41527;41528 41528 2 9606 Homo sapiens 0.007664555644396387 TPSLPTPPTREPK Unmodified 1419.7722 0.7721789 597 P10636-3;A0A024RA19;A0A0G2JMX7;A0A0G2JS76;A0A024R9Y1;A0A0G2JPD5;A0A0G2JQJ7;A0A7I2PLE3;A0A024RA17;A0A7P0T936;A0A024R9Y0;I3L170;B3KTM0;A0A7I2PJZ2;P10636-5;P10636-7;P10636-6;P10636-8;P10636-4;P10636-2;P10636;P10636-9 MAPT Microtubule-associated protein tau;Microtubule-associated protein yes no 0 0 1 1 0 1 43.502 43.502 3 0.061238 11600 20230619_1880_Aki_TMTPro18x_K_F1 45.825 27.723 78444 50419 83891 87379 86936 101820 92147 105500 103670 94966 115800 128900 111950 98564 104630 81505 121280 113580 72479 46494 84842 85350 90236 101860 93026 107210 105400 97546 118160 128190 114050 101780 107300 84071 115830 107570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45173000 27405 597 25742 51482 41529 41529 1 9606 Homo sapiens 0.07908369860524544 TPSLSSTQPTR Unmodified 1173.599 0.59896556 2074 A8K5H3;Q9H1K0 RBSN Rabenosyn-5 yes no 0 0 0 8 0 1 36.738 36.725 2 0.00095723 8160 20230619_1888_Aki_TMTPro18x_K_F8 105.2 85.349 7106.8 6022.7 7365.2 6912.6 12800 15318 9912 8784.8 8572.2 8439 10358 8005.3 9794.3 9388.5 8034.7 11079 12751 11813 6574.9 5521.1 7541.5 7013.3 12792 14698 10118 9412.4 8883.3 8543.3 10502 8210.3 9942.4 9726.2 8477.9 11137 12148 11216 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4840000 27406 2074 25743 51483 41530 41530 1 9606 Homo sapiens 0.01911003804139 TPSLTVFLLGQSAR Unmodified 1488.83 0.83002813 1633 A0A6Q8PGB0;P24928;B4DET1 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 0 6 0 1 63.106 63.155 3 0.0051195 19526 20230619_1886_Aki_TMTPro18x_K_F6 71.344 56.468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27407 1633 25744 51484 41531 41531 1 9606 Homo sapiens 0.10516631786003927 TPSNELYK Unmodified 950.47091 0.4709115 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B4DHD2;B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 5.5 0.5 1 1 42.803 42.897 2 0.00067604 10727 20230619_1886_Aki_TMTPro18x_K_F6 158.61 103.84 66495 46764 50515 59589 64317 70915 59709 62721 99045 74215 77658 94375 96710 91684 62736 93485 124060 104140 61310 42946 52901 59254 65715 70660 61662 64947 97774 75088 81573 94757 96632 94717 67930 94426 117970 98872 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36450000 27408 3981 25745 51485;51486 41532;41533 41533 2 9606 Homo sapiens -0.006305117190890996 TPSPAAEDAREPEAK Unmodified 1567.7478 0.74781464 108 B7Z6F7;A0A024R0R6;Q92797 SYMPK Symplekin yes no 0 0 1 2.5 0.5 1 1 36.27 36.326 3 1.0423E-07 8215 20230619_1881_Aki_TMTPro18x_K_F2 133.9 127.32 122330 80226 91588 122190 131520 157880 136830 141750 175680 144260 160700 164980 166430 165850 178960 176100 202550 174000 112740 73847 96414 120300 133830 156470 138790 145960 176080 146400 165910 166620 170480 171460 183030 176720 193370 165400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 47622000 27409 108 25746 51487;51488 41534;41535;41536 41535 3 9606 Homo sapiens -0.013349350836051599 TPSPKEEDEEPESPPEK Unmodified 1923.8585 0.85854688 4497 Q9H1E3;Q9H1E3-2 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes no 0 0 1 2.5 0.5 1 1 40.997 41.063 3 1.0966E-06 10306 20230619_1881_Aki_TMTPro18x_K_F2 116.78 97.227 50331 42676 41954 44969 44314 62866 47611 50172 69061 71078 84153 75089 72509 64659 58140 73676 78650 71014 46486 39091 43384 45467 46105 61903 48492 52667 69721 70852 85020 75714 73718 67497 60590 73706 75001 67505 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 101080000 27410 4497 25747 51489;51490 41537;41538 41537 2 9606 Homo sapiens -0.06642804676721425 TPSQDSDYINANFIK Unmodified 1711.8053 0.80532952 3796 Q05209;H0YC15 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 yes no 0 0 0 6 0 1 56.645 56.717 3 4.8132E-08 16749 20230619_1886_Aki_TMTPro18x_K_F6 138.31 112.99 40585 34149 39818 42900 34918 41034 36877 38757 50659 40497 51150 49544 50810 38396 53591 48552 56605 56966 37529 31333 40454 42580 36757 41580 37518 39814 50798 41127 52437 49529 51970 40541 54583 49111 54133 54016 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89084000 27411 3796 25748 51491 41539 41539 1 9606 Homo sapiens -0.02210092878044634 TPSQLSDNNCRQ Unmodified 1418.6208 0.62083999 252 Q4G0F5;A0A024R3L9 VPS26B Vacuolar protein sorting-associated protein 26B yes no 0 0 1 4 0 1 33.599 33.652 2 0.00010628 6964 20230619_1883_Aki_TMTPro18x_K_F4 126.71 103.39 11325 5472.1 16318 11324 17407 19179 14291 15476 14443 10695 18248 20808 17760 14476 15963 7337.1 20365 20586 10483 5067.8 16145 11055 17895 18699 14612 15934 14837 11375 18539 20428 18052 14780 16457 8258.4 19444 19412 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9724400 27412 252 25749 51492 41540 41540 1 9606 Homo sapiens -0.07172559509626808 TPSSDVLVFDYTK Unmodified 1470.7242 0.72422566 2910;3814 E9PC52;Q6FHQ0;Q16576;Q16576-2;Q5JP01;Q09028-3;Q09028-2;Q09028;Q09028-4;H0YF10 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 no no 0 0 0 6.5 0.5 1 1 60.308 60.358 3 9.1749E-12 17908 20230619_1887_Aki_TMTPro18x_K_F7 191.79 156.05 612280 494970 561650 558570 503050 592400 591530 589050 629720 751500 716230 654960 814760 644920 595770 790270 727170 672110 565730 453750 573880 559580 529920 596490 592750 606270 643530 747680 734440 669170 817700 673430 617980 784700 694100 639830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2023899999.9999998 27413 2910;3814 25750 51493;51494 41541;41542 41542 2 9606 Homo sapiens 0.007692511498589738 TPSSSSLSQR Unmodified 1048.5149 0.51490158 126 Q9H0H5;A0A2X0U4T9;A0A024R136;B2RE34;Q9H9L9 RACGAP1 Rac GTPase-activating protein 1 yes no 0 0 0 7 0 1 31.934 32.026 2 0.0054874 6143 20230619_1887_Aki_TMTPro18x_K_F7 104.2 67.644 9526.3 4593.5 14237 13112 17493 23484 12210 12748 14960 9012.6 11161 10177 14527 9952.2 10506 6203.3 10568 8586.9 8822.2 4281.1 14115 12651 17797 22682 12709 13661 14924 9367.5 11767 10269 14510 10090 10731 6445.2 10097 8137.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6298600 27414 126 25751 51495 41543 41543 1 9606 Homo sapiens -0.0074152729278011975 TPSTMENDSSNLDPSQAPSLAQPLVFSNSK Oxidation (M) 3177.4772 0.47720203 3878;3877 Q14157;Q14157-5;B4DYY5;F8W726;Q14157-3;Q5VU77;Q14157-1;Q14157-4;B4DZJ6 UBAP2L Ubiquitin-associated protein 2-like no no 0 1 0 7 0 1 61.052 61.095 4 0.0011452 18213 20230619_1887_Aki_TMTPro18x_K_F7 70.461 63.586 29343 27073 29307 27269 32095 23474 36164 25177 24564 36674 35088 33489 35601 27275 42561 35840 28334 30657 27154 24783 29793 27501 33092 24120 35858 25947 26159 36321 35547 33925 36603 28801 42336 35614 27263 29164 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217210000 27415 3877;3878 25752 51496 41544 41544 2544 1 9606 Homo sapiens -0.024437481334643962 TPSYSPTQR Unmodified 1035.4985 0.49852324 1783 A0A8I5KXR3;Q03164-2;Q03164;Q03164-3;A0A3B3ITT7;A0A8I5KQV5;A0A8I5KY70;A0A8I5KQ03 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 0 0 0 7 0 1 34.057 34.138 2 0.00068533 6957 20230619_1887_Aki_TMTPro18x_K_F7 127.02 94.8 21514 13758 19862 18453 28138 28656 27153 24464 28781 19129 22982 17828 21841 12929 20294 12756 22370 17115 19854 12647 20430 18382 28528 28105 27469 25136 28965 19597 23769 18001 22217 13526 20732 13091 21347 16229 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7822700 27416 1783 25753 51497 41545 41545 1 9606 Homo sapiens -0.017806084588528392 TPTAPAVNLAGAR Unmodified 1237.6779 0.67788459 1230 Q9UQ35;A0A140VK53;O60382;I3L3Q8;A0AUK8 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 1.5 0.5 1 1 44.688 44.729 2 2.8583E-06 12173 20230619_1880_Aki_TMTPro18x_K_F1 142.83 119.94 183430 141590 175130 184140 191800 233210 225820 203630 261670 169230 191630 178960 190700 167420 187770 169750 220910 197310 169490 130010 178960 183070 199030 231320 226690 209210 261400 173390 199820 180910 194620 173230 192690 172160 210880 187200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 225760000 27417 1230 25754 51498;51499 41546;41547 41546 2 9606 Homo sapiens 0.06855275829070706 TPTCQSSTDCSPYAR Unmodified 1729.7036 0.70358334 3349 O95235;O95235-2 KIF20A Kinesin-like protein KIF20A yes no 0 0 0 4 0 1 35.644 35.692 3 1.4984E-07 7823 20230619_1883_Aki_TMTPro18x_K_F4 97.797 95.558 10496 7931.2 12360 13453 15721 16047 10405 12708 18759 14164 13426 16091 14247 14594 15224 12946 15620 13894 9715.1 7306.3 12452 13154 15925 15950 11064 13248 18423 14311 14081 16180 14581 15005 15472 13101 14929 13193 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11395000 27418 3349 25755 51500 41548 41548 1 9606 Homo sapiens -0.13208030563737339 TPTEAPADCR Unmodified 1116.487 0.48697227 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H962;A0A994J6V7;Q8IWJ0;Q5H963;A0A994J4V6;A0A1B0GXC7 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 2 0 1 31.648 31.711 2 0.00024217 6360 20230619_1881_Aki_TMTPro18x_K_F2 135.71 112.15 9382.7 4807.4 13795 13491 19955 20620 11946 14243 14548 11683 15826 24321 16235 14240 17025 6859.4 22284 22599 8689.4 4477 13731 12981 20007 20148 12604 14922 14723 12330 16256 23721 16601 14644 17529 7925.9 21273 21297 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16647000 27419 594 25756 51501 41549 41549 1 9606 Homo sapiens -0.06661173544534904 TPTGDEFVK Unmodified 992.48148 0.48147619 294 A0A087WYJ2;A0A024R4F4;A0A2R8Y705;Q308M6;M0R2B7;P28340;M0QZR8;Q59FA0;A0A2R8Y7K6 POLD1 DNA polymerase;DNA polymerase delta catalytic subunit yes no 0 0 0 4 0 1 46.288 46.331 2 0.009121 12305 20230619_1883_Aki_TMTPro18x_K_F4 86.744 46.475 80568 65222 71954 76037 75347 87555 75714 80339 97891 91700 101910 106280 117970 91566 92095 110910 126370 108780 74428 59808 73884 76062 78101 87498 77036 82868 98632 92529 105070 106740 118630 95987 96087 110980 120460 103410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53760000 27420 294 25757 51502 41550 41550 1 9606 Homo sapiens -0.015065290646589347 TPTLASTPIPPTPQAPSPAVDAEIR Unmodified 2526.333 0.33296804 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 7.33 0.471 2 1 58.203 58.253 3;4 6.8379E-06 17144 20230619_1887_Aki_TMTPro18x_K_F7 92.905 77.313 28008 21458 27673 33958 27992 34551 29851 32283 36622 38268 35672 35583 39817 30032 34383 40925 40296 43192 25885 19748 28185 33247 29139 34817 30211 33295 36912 38269 36821 36060 40227 31765 35422 41054 38518 40989 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 213080000 27421 2830 25758 51503;51504;51505 41551;41552 41552 2 9606 Homo sapiens 0.13085487750095126 TPTLYLDFK Unmodified 1096.5805 0.58046195 698 A0A024RBX6;O00625 PIR Pirin yes no 0 0 0 1 0 1 61.567 61.567 2 0.0035186 19117 20230619_1880_Aki_TMTPro18x_K_F1 105.78 75.127 59647 47321 55061 61740 67231 83141 70273 72354 78106 38570 36440 32329 31299 24655 57250 43412 35270 30097 55108 43446 56555 61423 69036 82153 70889 73742 77346 40669 39157 32908 33331 26669 56469 42624 33923 28746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32050000 27422 698 25759 51506 41553 41553 1 9606 Homo sapiens 0.03603493900232024 TPTMGWLHWER Unmodified 1412.6659 0.66593969 1530 A0A6Q8PFA9;Q53Y83;Q53HF3;A0A3B3IUC4;P06280;A0A6Q8PHD1;A0A6Q8PGG0;A0A669KAY7;A0A669KB83;A0A3B3IRU3;B4DLT5;V9GYN5;A0A6Q8PHM8 GLA Alpha-galactosidase A yes no 0 0 0 2 0 1 55.174 55.195 3 0.016137 16666 20230619_1881_Aki_TMTPro18x_K_F2 62.891 56.038 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27423 1530 25760 51507 41554 41554 1 9606 Homo sapiens -0.023886641857643554 TPTPEPAEVETR Unmodified 1325.6463 0.64630969 2608 B4DW31;Q9UHY1;F8W6G1 NRBP1 Nuclear receptor-binding protein yes no 0 0 0 1.5 0.5 1 1 38.59 38.59 2 0.0012335 9482 20230619_1880_Aki_TMTPro18x_K_F1 95.483 72.743 17007 12743 17549 21250 24258 29273 25394 22534 35272 20604 29851 28212 26741 24642 23418 25601 34198 30928 15721 11737 17913 20840 24730 28815 25821 23445 35089 21199 30727 28191 27260 25581 24476 26004 32593 29331 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14024000 27424 2608 25761 51508;51509 41555;41556 41555 2 9606 Homo sapiens -0.003487617155542466 TPTPVHYRPHGAK Unmodified 1459.7684 0.76843093 1913 A2IDC7;Q4TT37;A2IDC6;Q13084 MRPL28 39S ribosomal protein L28, mitochondrial yes no 0 0 1 3.5 0.5 1 1 30.625 30.702 5 0.0058708 5881 20230619_1882_Aki_TMTPro18x_K_F3 72.089 59.729 71759 56818 67010 88674 90490 97720 92268 99000 103930 88937 101190 100220 94758 85883 83182 96324 105490 100170 66304 52274 68958 86980 92179 98113 93282 100770 105050 90776 103650 100770 96423 89589 86090 96814 100680 95122 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75860000 27425 1913 25762 51510;51511 41557;41558 41557 2 9606 Homo sapiens 0.05693744877339668 TPTQLEGATR Unmodified 1072.5513 0.55128709 317 A0A024R534;O94776;O94776-2 MTA2 Metastasis-associated protein MTA2 yes no 0 0 0 4.5 0.5 1 1 37.425 37.494 2 0.00010153 8506 20230619_1883_Aki_TMTPro18x_K_F4 142.94 100.54 129980 90649 114510 121360 162320 166720 144860 151490 202170 150970 160860 142190 175770 148720 135120 145800 177250 147760 119960 83294 118360 120600 164390 164800 148790 155720 200950 152490 167450 145030 177040 153070 140480 146670 168980 140430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 188190000 27426 317 25763 51512;51513 41559;41560 41559 2 9606 Homo sapiens 0.017913496039454913 TPVEEVPAAIAPFQGR Unmodified 1680.8835 0.88352026 3931 Q15393;A8K6V3;B3KQH1;B3KM77;Q15393-3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 6 0 1 57.951 58.019 3 2.0066E-09 17294 20230619_1886_Aki_TMTPro18x_K_F6 144.8 123.17 122280 113290 108510 136370 125000 135390 135390 130160 150730 143810 134280 157160 166120 125880 150090 177700 155050 176420 113050 103870 111790 135780 128830 136890 136350 133750 152100 145010 140120 157860 167680 133680 153340 177570 148450 167500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 781100000 27427 3931 25764 51514 41561 41561 1 9606 Homo sapiens 0.07031384497804538 TPVEPEVAIHR Unmodified 1246.667 0.66698555 3681 P60866;P60866-2;A0A7P0S5H5;E5RJX2;E5RIP1 RPS20 40S ribosomal protein S20 yes no 0 0 0 4 2 1 1 1 1 1 1 1 39.583 39.642 3 2.3246E-19 9426 20230619_1882_Aki_TMTPro18x_K_F3 206.97 172.44 373430 286870 299330 330870 329250 374010 296830 319890 488270 435530 452940 433470 560600 453040 377830 548940 523510 480180 344600 263080 310820 331100 339460 373760 307160 333570 485210 434250 470640 441070 560030 471770 396380 545770 499180 456960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4187399999.9999995 27428 3681 25765 51515;51516;51517;51518;51519;51520;51521 41562;41563;41564 41562 3 9606 Homo sapiens 0.05351873454787892 TPVEVPVGGFK Unmodified 1128.6179 0.61791009 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0 PLEC;PLEC1 Plectin yes no 0 0 0 8 0 1 54.786 54.853 2 7.9667E-07 15643 20230619_1888_Aki_TMTPro18x_K_F8 134.25 64.971 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27429 3921 25766 51522 41565 41565 1 9606 Homo sapiens 0.0587458516586139 TPVIDADKPVSSQLR Unmodified 1624.8784 0.87843489 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9;B4DSR6;A0A7P0TAS7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 7.5 0.5 1 1 46.371 46.434 3 1.2923E-05 12060 20230619_1888_Aki_TMTPro18x_K_F8 116 100.74 88997 81567 86064 90054 85702 96750 112880 92668 97323 103160 102130 101640 109600 78423 112740 105000 91044 100170 82333 74726 87714 90368 89729 97258 111710 95294 100260 103620 104940 102460 111630 83132 113350 104850 87383 95156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 556840000 27430 3881 25767 51523;51524 41566 41566 1 9606 Homo sapiens 0.090990806352238 TPVIVTLK Unmodified 869.5586 0.5586043 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;B7Z602;A0A024R3G0;J3KTF1;J3QL06;B7Z4E6;A0A8Q3SHP7;A0A0G2JRG7;A0A0G2JRT9;Q9BST8;A0A0G2JR71;A0A0G2JR88 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 2 0 1 54.264 54.288 3 0.013336 16289 20230619_1881_Aki_TMTPro18x_K_F2 79.906 19.317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27431 874 25768 51525 41567 41567 1 9606 Homo sapiens 0.11860733942341994 TPVLFDIYEIK Unmodified 1336.7279 0.72785447 4024 Q6ICS0;Q59EP1;B4DPJ2;Q5T0G8;P50995-2;P50995;B7Z6L0 ANXA11 Annexin;Annexin A11 yes no 0 0 0 7.67 0.471 1 2 64.057 64.082 2;3 1.7649E-07 19573 20230619_1888_Aki_TMTPro18x_K_F8 152.62 107.48 36386 32627 34019 37071 31510 35124 45365 43282 47669 44409 44214 46409 46965 39767 48503 53186 46252 48232 33647 29901 34745 37067 33298 35860 44996 43689 48283 44874 45677 46809 47916 41941 49197 52942 44289 45856 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 325320000 27432 4024 25769 51526;51527;51528 41568;41569 41569 2 9606 Homo sapiens 0.07295965714365593 TPVLLHDHDER Unmodified 1330.663 0.6629628 1264 A0A1B0GU86;V9HWA0;B4DNW0;C9JMV9;Q03154-2;Q03154-4;Q03154;A0A1B0GW23;Q03154-3 HEL-S-5;ABHD14A-ACY1;ACY1 Aminoacylase-1 yes no 0 0 0 3 0.816 1 1 1 33.499 33.558 4 0.00031733 7011 20230619_1882_Aki_TMTPro18x_K_F3 97.214 75.985 22491 15542 20218 21899 23368 28855 22957 22857 31022 29232 33035 37363 34114 33033 26498 29082 36580 38730 20759 14289 20788 21672 24057 28499 23421 23937 31223 29463 33863 37384 34455 34000 27649 29825 34917 36675 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78097000 27433 1264 25770 51529;51530;51531 41570 41570 1 9606 Homo sapiens 0.010857839610935116 TPVPSDIDISR Unmodified 1198.6194 0.61936665 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A494C1T2;A0A8V8TL46;A0A8V8TMA9 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 4 0.816 1 1 1 47.62 47.685 2 5.4823E-09 12866 20230619_1883_Aki_TMTPro18x_K_F4 188.38 163.48 436690 333620 389230 391380 386560 416140 414100 401360 395070 524470 569550 582100 637370 524080 555220 590710 604260 649030 403270 306020 399270 390960 402390 418710 415610 414410 411080 524950 579210 586310 644230 546200 568940 595730 577980 615670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1465299999.9999998 27434 2973 25771 51532;51533;51534 41571;41572 41572 2 9606 Homo sapiens 0.028001744639368553 TPVRGEEPVFMVTGR Unmodified 1673.8559 0.85592531 1902 A1L020 MEX3A RNA-binding protein MEX3A yes yes 0 0 1 8 0 1 47.348 47.406 3 0.00097933 12420 20230619_1888_Aki_TMTPro18x_K_F8 80.535 63.916 103590 100130 98312 106300 105850 114070 108030 106280 121360 121830 118690 106640 118110 97192 115580 118280 118620 117900 95856 91681 100460 106980 109410 114630 109230 109530 122820 121840 121810 108660 120410 101720 117760 118500 113460 111990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46802000 27435 1902 25772 51535 41573 41573 1 9606 Homo sapiens 0.045951579659231356 TPVSEDMLGR Oxidation (M) 1119.523 0.52302343 1233 A0A140VK65;P21281;Q59HF3;H0YC04;Q71UA2;B4DWH7;C9JL73;P15313;C9JNS9 ATP6V1B2;ATP6B1;ATP6V1B1 V-type proton ATPase subunit B, brain isoform;V-type proton ATPase subunit B, kidney isoform yes no 0 1 0 2.5 0.5 1 1 38.863 38.923 2 0.080292 9165 20230619_1882_Aki_TMTPro18x_K_F3 55.908 45.955 97410 74047 83840 106450 98376 105470 105450 107060 119030 117450 140360 140370 148340 121270 102120 166850 167520 178900 89928 68069 86652 104770 101240 106740 106340 109570 121320 118830 143290 140920 148970 128170 108630 167390 159730 169750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152980000 27436 1233 25773 51536;51537 41574 41574 775 1 9606 Homo sapiens -0.03195716367645218 TPVSEDMLGR Unmodified 1103.5281 0.52810881 1233 A0A140VK65;P21281;Q59HF3;H0YC04;Q71UA2;B4DWH7;C9JL73;P15313;C9JNS9 ATP6V1B2;ATP6B1;ATP6V1B1 V-type proton ATPase subunit B, brain isoform;V-type proton ATPase subunit B, kidney isoform yes no 0 0 0 4 0 1 45.63 45.674 2 0.00024217 12015 20230619_1883_Aki_TMTPro18x_K_F4 135.71 107.2 146680 131210 148450 148120 123560 138880 145560 145680 162340 196240 192000 203950 211100 171790 186980 218830 221940 236100 135720 120240 150270 148150 130920 141350 146100 149730 165790 195770 196510 205560 213660 180830 192670 220010 212110 224010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104190000 27437 1233 25773 51538 41575 41575 1 9606 Homo sapiens -0.0195141250501365 TPVSITEHPK Unmodified 1107.5924 0.59242362 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 6.5 0.5 1 1 39.246 39.322 3 8.5518E-06 9008 20230619_1887_Aki_TMTPro18x_K_F7 155.15 125.68 158510 132210 142280 175260 186920 186920 171860 186060 200180 180430 209320 231580 198490 166110 174870 214520 241990 234270 146460 121380 146730 173550 190140 188140 175070 189990 202650 184170 213980 230530 201850 176060 182150 215770 230830 222330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 260880000 27438 3881 25774 51539;51540 41576;41577;41578 41578 3 9606 Homo sapiens 0.0429311064342528 TPVTQVNEVTGTLR Unmodified 1513.81 0.81002097 325 A0A024R578;Q13405;H0YDP7;Q59GE9 MRPL49 39S ribosomal protein L49, mitochondrial yes no 0 0 0 7 0 1 49.482 49.566 2 6.0253E-19 13382 20230619_1887_Aki_TMTPro18x_K_F7 182.23 149.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27439 325 25775 51541 41579 41579 1 9606 Homo sapiens 0.07366836055371095 TPVVESARPNSTSSR Unmodified 1586.8012 0.8012472 767 B4DLG0;A0A2R8Y568;A0A024RDL5;A0A2R8Y522;A0A087WVB5;Q75MD7;A0A2R8Y8C6;Q8WXX7-5;Q8WXX7-2;Q8WXX7 AUTS2 Autism susceptibility gene 2 protein yes no 0 0 1 7.5 0.5 1 1 31.27 31.324 3 0.00069544 5850 20230619_1887_Aki_TMTPro18x_K_F7 98.676 84.77 17188 14698 16648 16051 13656 12323 14738 15293 15541 18317 20523 14161 20295 17343 16541 18955 20912 16140 15894 13467 16902 16064 14429 12828 14839 15501 15994 18220 20764 14699 20543 17871 17139 18861 19933 15377 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 16966000 27440 767 25776 51542;51543 41580;41581 41580 2 9606 Homo sapiens 0.031318624188998 TPYGASIFQSK Unmodified 1197.603 0.60298831 1886;2343 Q04727-3;Q04727;Q04727-4;Q04727-2;A0A994J7T6;B3KQ29;Q04724;B4DEF9;B4E345;B4DE62;Q04726-3;B4E2W3;Q6PRX2;Q6PRX3;H0YL70;H0YNT2;B3KUA2;H0YNI7;B3KM67;H0YKN8;Q04726-2;Q04726-7;Q04726-6;Q04726-5;Q04726-4;Q04726;H0YKT5 TLE4;TLE1;TLE3 Transducin-like enhancer protein 4;Transducin-like enhancer protein 1;Transducin-like enhancer protein 3 no no 0 0 0 3 0 1 53.875 53.928 3 1.1969E-05 15902 20230619_1882_Aki_TMTPro18x_K_F3 124.1 80.334 63196 52210 62034 65698 60104 66681 56853 62682 66650 74526 79841 81638 77553 70792 75002 88347 85612 89478 58430 47909 63093 65252 62517 67266 57875 64628 67913 74883 81211 82199 79140 74285 76974 88523 81837 84961 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 248140000 27441 1886;2343 25777 51544 41582 41582 1 9606 Homo sapiens 0.012090932978253477 TPYIVLSGSGK Unmodified 1120.6128 0.61282471 3252 O43290;B4DDH9 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 0 3 0 1 53.898 53.95 3 0.00044725 15882 20230619_1882_Aki_TMTPro18x_K_F3 96.229 81.556 53922 43628 48873 55701 58208 66654 55569 60134 70981 62103 67839 65487 62772 52169 60181 74793 64466 62774 49818 40043 50248 55388 59709 66408 56669 61920 71290 62776 69509 65915 64100 55431 61562 74082 61627 59756 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144890000 27442 3252 25778 51545 41583 41583 1 9606 Homo sapiens 0.05734281303239186 TPYLGDVAVVVHPGK Unmodified 1550.8457 0.84567819 4008 Q53SW3;Q9BPU6 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 1.5 0.5 1 1 54.699 54.711 3 0.023822 16480 20230619_1881_Aki_TMTPro18x_K_F2 52.527 35.843 48160 36554 43621 46574 41338 48673 46142 43087 55291 53003 52152 44261 54050 48313 53595 52721 56248 52610 44478 33559 44674 46233 43296 48926 46531 44681 55690 52796 53693 45492 55100 49938 54647 52912 53766 49984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284010000 27443 4008 25779 51546;51547 41584 41584 1 9606 Homo sapiens 0.0922891830300614 TPYTIMFGPDK Oxidation (M) 1284.606 0.60602477 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2;A0A7P0Z484;A0A7P0TAR9;A0A7P0Z4H2;Q16094;Q6ZP56;D6RFL1 CANX Calnexin yes no 0 1 0 3.67 3.09 1 1 1 55.51 55.538 2;3 0.0016396 16629 20230619_1880_Aki_TMTPro18x_K_F1 79.82 55.477 172800 139030 156790 159660 157840 197400 177540 191230 222350 130310 125550 99817 121860 91853 148700 129210 122360 112940 159640 127470 160670 160090 164680 196550 179230 194080 219830 134200 133100 102620 125700 97053 149180 128400 117260 107480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 298320000 27444 1700 25780 51548;51549;51550 41585;41586 41585 1107 2 9606 Homo sapiens -0.024893996396485818 TQADLDSLVR Unmodified 1116.5775 0.57750184 1484 A0A384NY14;Q7Z4W1;J3KS22;J3QS36 DCXR L-xylulose reductase yes no 0 0 0 3.5 0.5 1 1 49.093 49.15 2 2.2524E-07 13758 20230619_1882_Aki_TMTPro18x_K_F3 210.64 185.74 767320 566950 783800 843640 670510 767360 859100 841190 965140 1096200 1350000 1346100 1119000 1225400 1327800 1321900 1485700 1614300 709220 521450 793580 828060 710660 783150 859010 861410 992310 1101600 1357200 1351300 1161200 1272100 1355200 1343200 1420900 1529700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1179600000 27445 1484 25781 51551;51552 41587;41588 41587 2 9606 Homo sapiens 0.023876187754240163 TQAIVCQQLDLTHLK Unmodified 1766.9349 0.93490391 3692 P61221;D6R9I9;D6RGF4 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 0 0 1.5 0.5 1 1 55.707 55.718 3 6.0078E-19 16816 20230619_1881_Aki_TMTPro18x_K_F2 206.74 169.59 121020 98789 101950 114560 103440 112070 116550 127230 126760 147070 139900 132400 160630 135030 139510 162910 144790 145950 111750 90582 105240 114400 107700 113890 117120 129420 129220 147080 143780 135220 162260 140670 142660 162260 138490 138800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 811540000 27446 3692 25782 51553;51554 41589 41589 1 9606 Homo sapiens 0.08211385200229415 TQARPVGVK Unmodified 954.56106 0.56106391 3356 O95433;O95433-2;G3V438;H0YJG7 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 1 3.5 0.5 1 1 32.881 32.946 3 0.0051011 6724 20230619_1882_Aki_TMTPro18x_K_F3 79.148 55.829 100120 46755 133730 123320 203000 191860 134690 182720 152220 68855 101200 84809 83325 67551 126520 41074 110100 63230 92584 43507 133970 119020 203220 188480 140430 184060 151820 76265 105430 84872 87643 68889 126480 43242 105180 59994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173820000 27447 3356 25783 51555;51556 41590 41590 1 9606 Homo sapiens 0.08196582400000807 TQASSSFQDSSQPAGK Unmodified 1624.7329 0.73289286 3589 P46087;P46087-4;P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 5.5 0.5 1 1 39.634 39.723 3 1.7267E-08 9375 20230619_1885_Aki_TMTPro18x_K_F5 138.05 129.87 65484 46610 70438 70318 96649 104510 88607 92858 95559 82237 102250 102240 111000 89570 95952 64844 116620 104830 60540 42883 71539 69481 98064 102780 90032 95345 97189 84313 104980 102400 112270 91583 98786 67913 111300 99188 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 172970000 27448 3589 25784 51557;51558 41591;41592;41593 41591 3 9606 Homo sapiens -0.05448426951602414 TQAYQDQKPGTSGLR Unmodified 1648.8169 0.81689726 1521 A0A3B3ITK7;P36871 PGM1 Phosphoglucomutase-1 yes no 0 0 1 8 0 1 38.148 38.134 3 4.8975E-14 8711 20230619_1888_Aki_TMTPro18x_K_F8 182.17 167.33 71001 59221 61939 69822 82019 79014 67047 71555 76755 83551 91627 92796 100200 77644 84762 110910 103330 70963 65591 54305 63997 69760 83149 79076 68806 73929 78304 84063 93680 93323 101210 82303 87621 108620 98460 67943 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137130000 27449 1521 25785 51559 41594 41594 1 9606 Homo sapiens 0.018441489359247498 TQCALAASK Unmodified 948.46987 0.46986564 4389 Q96QK1;Q53FR4;Q5HYM2 VPS35;DKFZp686O2462 Vacuolar protein sorting-associated protein 35 yes no 0 0 0 8 0 1 39.743 39.732 2 0.0009337 9366 20230619_1888_Aki_TMTPro18x_K_F8 106.62 65.589 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27450 4389 25786 51560 41595 41595 1 9606 Homo sapiens -0.006430493596440101 TQCTEFFLAPVK Unmodified 1439.7119 0.71188683 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;H0Y9Y3;Q9UMS6;Q9UMS6-3 SYNPO2 Synaptopodin-2 yes no 0 0 0 1 0 1 60.579 60.579 3 0.00013663 18702 20230619_1880_Aki_TMTPro18x_K_F1 90.731 74.594 109130 91443 111740 119480 123390 147170 142760 136990 148510 145220 138260 136140 168090 132130 141860 181920 158900 144350 100940 83939 113550 118700 127810 146440 142970 140850 150630 146070 143640 138580 169300 139060 145870 179800 151770 137560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87829000 27451 4686 25787 51561 41596 41596 1 9606 Homo sapiens 0.009619362058174374 TQDECILHFLR Unmodified 1430.6976 0.69763375 4016;645 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9;Q59G16;A0A024RB22;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2;B4DF22 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 no no 0 0 0 5.75 0.829 2 1 1 53.92 53.992 3 2.5409E-09 15326 20230619_1887_Aki_TMTPro18x_K_F7 184.58 151.58 217210 152820 170040 217900 191360 206130 202640 209380 254880 218960 216920 220020 235130 225420 216130 271200 228740 319100 200310 140510 177250 214440 197550 209370 205260 213970 255140 220910 225170 223600 238700 234760 221150 274270 219360 302250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1154600000 27452 4016;645 25788 51562;51563;51564;51565 41597;41598;41599 41599 3 9606 Homo sapiens -0.00048716222477196425 TQDPSSPGTTPPQAR Unmodified 1538.7325 0.73249893 2251 B2R7X3;Q13112 CHAF1B Chromatin assembly factor 1 subunit B yes no 0 0 0 4 0 1 33.01 33.067 3 6.2542E-05 6751 20230619_1883_Aki_TMTPro18x_K_F4 96.247 88.703 21165 15876 22338 23520 23762 31270 22487 25312 32138 25115 30715 29792 32499 25084 22049 23368 37127 31012 19569 14600 22626 23212 24591 30871 23057 26256 32112 25554 31633 29868 32612 25962 23439 23936 35335 29396 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 10228000 27453 2251 25789 51566 41600;41601 41601 2 9606 Homo sapiens -0.015318018808102352 TQEAGALGVSDR Unmodified 1202.5891 0.58912916 797 A0A075B7B1;O15061-2;O15061;H0YL34 SYNM Synemin yes no 0 0 0 2 0 1 38.258 38.321 2 1.5405E-06 9043 20230619_1881_Aki_TMTPro18x_K_F2 177.41 128.91 21358 18771 18765 27496 58627 64899 37813 33641 58997 37447 48192 59622 42143 41790 48847 48429 65547 60976 19739 17250 19936 27477 57235 62052 39926 36623 58412 38390 49773 58882 43594 44018 50469 49262 62522 57800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47379000 27454 797 25790 51567 41602 41602 1 9606 Homo sapiens -0.004061842012333727 TQEEGEERAESEQEAYLRED Unmodified 2397.0204 0.020420269 694 A0A024RBT2;Q502X2;A0A0S2Z5U7;Q9NR28-2;Q9NR28;A0A0S2Z5P6;Q9NR28-3 DIABLO Diablo homolog, mitochondrial yes no 0 0 2 1 0 1 41.401 41.401 3 2.0660000000000002E-54 10679 20230619_1880_Aki_TMTPro18x_K_F1 276.73 269.53 100900 86027 99101 107200 112560 130080 113540 114310 125310 134570 136960 142760 154850 123370 133410 158320 154780 165900 93309 78923 101080 106810 115930 129420 114810 118400 127550 135150 140790 143910 156410 129800 137360 158880 147960 157460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 337800000 27455 694 25791 51568 41603 41603 1 9606 Homo sapiens -0.12220912452312405 TQEEIVAK Unmodified 916.48656 0.48656157 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 3.5 0.5 1 1 41.796 41.848 2 0.00055889 10403 20230619_1882_Aki_TMTPro18x_K_F3 176.44 117.84 150590 83670 183770 180650 259080 333260 203400 248450 222380 179690 298400 381660 266920 258570 302210 134170 340020 359180 139220 77479 185090 176210 261960 323080 209110 257690 228230 191440 301860 373580 275280 264240 307820 150000 325100 338700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200870000 27456 909 25792 51569;51570 41604 41604 1 9606 Homo sapiens 0.024977747979505693 TQEELTPFFK Unmodified 1238.6183 0.61830402 2789 CON__P81644 yes yes 0 0 0 5.29 1.03 2 2 2 1 59.395 59.434 2;3 8.5972E-10 17857 20230619_1886_Aki_TMTPro18x_K_F6 236.35 177.37 + 57067 239630 261180 56741 248830 303400 198890 203640 327910 274540 489220 735990 202070 289350 488670 358210 409140 793610 55692 217410 246950 76440 258030 286230 207720 216700 332390 287490 483780 709990 229650 316560 486940 383440 394890 747750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1502299999.9999998 27457 2789 25793 51571;51572;51573;51574;51575;51576;51577 41605;41606;41607 41606 3 0.008539600950371096 TQEGSLSAR Unmodified 947.46722 0.46722311 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2.5 0.5 1 1 30.378 30.457 2 0.00016702 5748 20230619_1882_Aki_TMTPro18x_K_F3 160.36 107.88 40742 17329 54374 52933 72363 75166 57588 68703 57042 35467 66350 74209 58690 57796 68657 24185 76408 67195 37664 16190 54354 50750 73258 74093 58958 69720 58408 38820 67385 72963 60666 58382 69808 27408 72968 63401 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 72326000 27458 3758 25794 51578;51579 41608;41609 41609 2 9606 Homo sapiens -0.00861181492950891 TQEPFSVR Unmodified 962.48214 0.48214489 2228 B4DIQ0;B2R623;O60942-3;O60942-4;O60942-2;O60942;B4DSJ8 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes no 0 0 0 5 0 1 41.036 41.124 2 0.014489 10003 20230619_1885_Aki_TMTPro18x_K_F5 93.938 61.583 53160 40470 54647 51310 52349 56100 56855 56955 61503 57097 65424 56932 60233 57976 54732 61051 69552 65658 49146 37151 55330 51006 54658 56388 57232 58128 62525 57704 66652 57881 61435 59913 56603 61546 66377 62328 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55683000 27459 2228 25795 51580 41610 41610 1 9606 Homo sapiens -0.0005968962494762309 TQEQCVHNETK Unmodified 1372.6041 0.60412729 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YFD1;Q6PEK6 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 3 0 1 29.814 29.907 3 0.001636 5589 20230619_1882_Aki_TMTPro18x_K_F3 83.617 69.654 3481.4 2786.8 3803.3 5376.5 7998.1 6620.9 5237.3 8139.9 7410.1 4794.9 7518.7 10653 5193.6 5566.4 7828.3 1964.9 8703.2 9269.9 3221.2 2571.5 3906.4 5227.8 7887.3 6634.8 5512.7 8113.9 7419.1 5199.2 7632.2 10356 5508.2 5720.5 7929 2460.4 8322.6 8725.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5848100 27460 2865 25796 51581 41611 41611 1 9606 Homo sapiens -0.06727060395587614 TQETPSAQMEGFLNR Oxidation (M) 1723.7835 0.78354822 2337 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 0 1 0 4 0 1 43.822 43.866 3 6.4076E-05 11215 20230619_1883_Aki_TMTPro18x_K_F4 95.751 83.792 24162 22882 29951 26679 38157 32096 33956 33878 43130 30625 37697 36934 37194 28068 37417 32392 38512 37150 22408 20971 30036 26720 38788 32115 34761 34396 43161 31333 38909 36915 37964 29493 38075 32766 36828 35240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28636000 27461 2337 25797 51582 41612 41612 1454 1 9606 Homo sapiens -0.04939220898268104 TQETPSAQMEGFLNR Unmodified 1707.7886 0.7886336 2337 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 4.5 0.5 1 1 52.651 52.699 3 1.2412E-10 14877 20230619_1885_Aki_TMTPro18x_K_F5 154.6 136.85 102230 82022 99244 104960 90761 107800 112360 103400 122610 110070 115440 107870 120060 102630 113420 118740 119150 137300 94490 75287 100990 104150 95587 108670 112350 106160 124000 110850 118950 109470 122080 106930 115800 120080 114070 130140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 323610000 27462 2337 25797 51583;51584 41613;41614 41614 2 9606 Homo sapiens -0.03694917035659273 TQFEDCTVLTIAHR Unmodified 1689.8145 0.81445442 1644 P33527-9;I3L4X2;P33527-5;A0A7I2V2E0;P33527-2;P33527-3;P33527;Q9UQ98;Q68CP7;A0A0A0MS99;Q9BV39 ABCC1;MRP;DKFZp781G125 Multidrug resistance-associated protein 1 yes no 0 0 0 6 0 1 49.788 49.865 3 1.1952E-11 13842 20230619_1886_Aki_TMTPro18x_K_F6 173.71 153.25 50932 40011 47730 50446 51343 61544 55706 55200 72269 54240 53151 51647 56282 49175 65177 52042 52556 50893 47059 36723 48831 50228 53234 61228 56410 56799 71879 54838 55586 52465 57767 50955 65349 52240 50396 48357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64594000 27463 1644 25798 51585 41615 41615 1 9606 Homo sapiens -0.0028602279339793313 TQFLPPNLLALFAPR Acetyl (Protein N-term) 1738.977 0.97702672 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-3 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 1 0 0 7 0 1 71.081 71.098 2 1.9672E-05 22451 20230619_1887_Aki_TMTPro18x_K_F7 98.943 81.617 1360.2 0 0 0 0 805.57 853.69 923.36 1089.9 909.39 0 0 920.62 0 1658.8 1276.4 988.89 1790.4 1239.5 0 0 0 0 753.3 816.23 932.07 1054.8 892.27 0 0 940.45 0 1634.9 1290.6 958.19 1692.2 1 0 0 0 0 1 1 1 1 1 0 0 1 0 1 1 1 1 15323000 27464 33 25799 51586 41616 41616 1 9606 Homo sapiens 0.13709728670937693 TQGNVFATDAILATLMSCTR Oxidation (M) 2185.0507 0.050738302 3242 O15371-2;O15371-3;O15371;B4E1K8;B0QYA5;B0QYA4 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 1 0 3 0 1 63.999 64.03 3 5.1897E-05 20136 20230619_1882_Aki_TMTPro18x_K_F3 82.56 69.793 8364 8068.8 10778 11276 10363 10308 12203 10999 14195 9929.4 12581 11632 11917 10083 12643 10939 11936 12667 7761.1 7408.6 10745 11110 10832 10514 12257 11169 14264 10152 12951 11685 12217 10500 12795 11082 11432 12010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43671000 27465 3242 25800 51587 41617 41617 1910 1 9606 Homo sapiens 0.005614961981336819 TQGNVFATDAILATLMSCTR Unmodified 2169.0558 0.05582368 3242 O15371-2;O15371-3;O15371;B4E1K8;B0QYA5;B0QYA4 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 0 4.5 0.5 1 1 65.622 65.65 3 6.6826E-45 20655 20230619_1883_Aki_TMTPro18x_K_F4 249.5 231.87 15882 11071 15766 13570 11059 15173 16801 15125 14753 18808 18137 14879 20977 17190 18149 17358 18110 16309 14671 10163 15947 13528 12028 15214 16550 15554 15298 18688 18554 15369 21175 17672 18497 17388 17316 15508 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 119630000 27466 3242 25800 51588;51589 41618;41619 41618 2 9606 Homo sapiens 0.018058000607652502 TQGPILTASGK Unmodified 1071.5924 0.59242362 1133 A0A0S2Z5K8;V9HWK4;Q96SI9-2;Q96SI9 HEL162;STRBP Spermatid perinuclear RNA-binding protein yes no 0 0 0 1 0 1 45.112 45.112 3 0.014252 12332 20230619_1880_Aki_TMTPro18x_K_F1 66.023 48.998 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27467 1133 25801 51590 41620 41620 1 9606 Homo sapiens 0.05949110643427957 TQHIQQPR Unmodified 1006.5308 0.53082642 2205 B2R4C9;P51397 DAP Death-associated protein 1 yes no 0 0 0 6 0.816 1 1 1 23.142 23.212 3 0.0021303 3857 20230619_1886_Aki_TMTPro18x_K_F6 95.909 83.684 203760 146280 189770 206600 228600 259710 235870 233060 276050 217580 245660 266310 241280 230990 221690 230770 309250 292840 188160 134470 194650 204300 234700 257880 238590 239530 277550 222330 253420 266870 245760 239380 230640 235370 294930 277540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163470000 27468 2205 25802 51591;51592;51593 41621 41621 1 9606 Homo sapiens 0.02782223734800482 TQHLEGTGTFTTR Unmodified 1447.7056 0.7055559 4482 Q9C0D5-2;Q9C0D5 TANC1 Protein TANC1 yes no 0 0 0 6.5 0.5 1 1 35.889 35.955 3 3.3625E-06 7967 20230619_1886_Aki_TMTPro18x_K_F6 129.29 118.34 16540 10284 17843 15685 20745 21416 15649 19075 23681 18587 21289 20272 19381 16866 17985 20483 23624 19450 15281 9469.1 18041 15470 21183 21163 16337 19621 23562 18873 21859 20396 19785 17697 18636 20462 22520 18500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67973000 27469 4482 25803 51594;51595 41622 41622 1 9606 Homo sapiens -0.0003886570134454814 TQHLQELFSR Unmodified 1257.6466 0.64658446 4216 Q8TDR3;Q8IYV2;Q9UHI6;A0A7P0T9T8;Q8NEH0;A0A7P0T8G7;A0A7P0TB94 DDX20 Probable ATP-dependent RNA helicase DDX20 yes no 0 0 0 1 0 1 45.462 45.462 3 3.9916E-07 12506 20230619_1880_Aki_TMTPro18x_K_F1 173.64 143.83 29186 12633 25414 31668 29824 26883 30738 32417 35531 34573 36625 32325 31440 32789 33475 35980 36898 40571 26879 11750 26227 30317 30619 27655 31092 32794 35967 34756 37275 32953 32394 33962 34209 36355 35296 38472 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40679000 27470 4216 25804 51596 41623 41623 1 9606 Homo sapiens 0.02806702794987359 TQIAPGSQTVLGIGPGPADLIDK Unmodified 2247.2111 0.21106199 3131 Q9Y3E5;J3KQ48;Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes no 0 0 0 8 0 1 62.558 62.583 3 1.9944E-08 18910 20230619_1888_Aki_TMTPro18x_K_F8 104.41 92.723 191670 153390 186050 228730 174530 195750 201460 250820 259290 244000 221730 250500 229730 208500 219260 320020 248880 279590 177160 141040 189550 224300 183050 201610 203480 252150 259420 247070 229810 252670 233880 222220 225360 317210 238050 265880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 706370000 27471 3131 25805 51597 41624;41625 41625 2 9606 Homo sapiens 0.13734490458364235 TQIDHYVGIAR Unmodified 1271.6622 0.66223452 331 B7Z361;A0A024R5C4;B7Z3E3;B7Z8W8;O95197-3;O95197-4;O95197-7;O95197-2;O95197 RTN3 Reticulon;Reticulon-3 yes no 0 0 0 6.25 1.48 1 1 1 1 42.728 42.782 3 1.609E-13 10601 20230619_1888_Aki_TMTPro18x_K_F8 217.22 136.99 147390 99865 124120 153210 97253 105950 122290 117870 150160 179010 182470 199980 209660 174380 126330 276440 257620 283010 135960 91919 127770 149640 103910 110980 122770 121340 152820 178220 186870 201310 209280 186140 138010 276000 245400 268640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 719850000 27472 331 25806 51598;51599;51600;51601 41626;41627 41627 2 9606 Homo sapiens 0.037269893120537745 TQIEQTNEER Unmodified 1246.579 0.5789584 2783 CON__P17697 yes yes 0 0 0 1 0 1 31.72 31.72 2 0.0010219 6683 20230619_1880_Aki_TMTPro18x_K_F1 113.63 92.759 + 1798.2 1454.2 5131.3 3430.8 11199 17536 6197.4 7870.6 11701 2931 11434 22767 5002.1 10415 15990 3187.7 13696 17369 1688.1 1346.5 5023 3474.5 11063 16416 6709.3 8570.3 11552 3845.7 11555 21741 5873 10743 15869 4155.7 13152 16333 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8192400 27473 2783 25807 51602 41628 41628 1 -0.034467919264670854 TQILAASYELHK Unmodified 1372.7351 0.73506511 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1 0 1 51.218 51.218 3 6.2072E-10 14841 20230619_1880_Aki_TMTPro18x_K_F1 181.77 146.12 120440 100480 102690 107310 108130 127440 130210 135450 144790 142070 128430 122360 146200 121380 127040 139120 121650 131970 111240 92061 105930 108140 112580 127530 130450 137930 146090 142630 133280 125100 147700 126210 129290 139100 116510 125380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 636540000 27474 2337;3778;3779 25808 51603 41629 41629 1 9606 Homo sapiens 0.06360698314779256 TQILEWAAER Unmodified 1215.6248 0.62478638 499 Q5T9B9;A8K2X4;A0A024R878;P17813-2;P17813;Q96CG0 ENG Endoglin yes no 0 0 0 5.5 0.5 1 1 57.902 57.964 2 0.055931 17296 20230619_1886_Aki_TMTPro18x_K_F6 64.86 36.692 40216 28310 35214 35291 40316 53166 60816 59651 88516 48481 50633 62092 49188 53089 68521 47142 58828 77070 37116 25993 36299 35315 42145 52514 60910 60167 86937 50086 53786 62060 51255 54736 68688 49210 56506 72817 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 416360000 27475 499 25809 51604;51605 41630 41630 1 9606 Homo sapiens 0.02559898046388298 TQIPTQR Unmodified 842.46102 0.46101552 2961 F5GX11;V9HW55;P25786;P25786-2 PSMA1;HEL-S-275 Proteasome subunit alpha type-1 yes no 0 0 0 6.5 0.5 1 1 32.689 32.751 2 0.0082438 6806 20230619_1886_Aki_TMTPro18x_K_F6 120.92 95.923 64405 33434 77633 78361 99873 122030 81004 103900 222990 64545 92737 116430 101670 89863 96582 51106 112070 102850 59519 31019 78109 75916 101840 119510 87064 106270 213360 69281 101770 114810 103340 91546 98886 55045 107020 97173 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91195000 27476 2961 25810 51606;51607 41631 41631 1 9606 Homo sapiens 0.033483450661947245 TQIQSQESDLK Unmodified 1275.6307 0.63065962 449 A5PKY0;A0A024R7G6;M0R165;A8K5P4;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2;B4DQX5;B4DME4 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 3.5 0.5 1 1 42.363 42.406 3 0.00024806 10594 20230619_1883_Aki_TMTPro18x_K_F4 107.12 89.75 64563 41424 67917 70114 83750 92234 75546 88146 87167 64844 91518 97203 87271 80026 85419 58394 99558 84781 59645 38187 68962 68698 85520 91436 77053 89673 88217 67790 93551 96585 89159 81959 87510 60614 95017 80300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31284000 27477 449 25811 51608;51609 41632;41633 41633 2 9606 Homo sapiens 0.0038695176742749027 TQIVDCAAVANWIFSSELSR Unmodified 2266.1052 0.10521671 133 A0A024R179;Q09161 NCBP1 Nuclear cap-binding protein subunit 1 yes no 0 0 0 2 0 1 65.206 65.213 3 0.0066879 20914 20230619_1881_Aki_TMTPro18x_K_F2 62.19 51.532 3997.7 2601.8 4049 4411.7 3953.1 3856.5 3797.5 3547.1 5100.9 3732.7 3536 4154.1 4069.3 3085.5 5076.6 4854.6 3656.3 3427.8 3692.3 2398.3 4108.3 4296.3 4107.7 3934.1 3878.2 3653.5 5058.1 3778 3731.9 4161.8 4181 3310.2 5064.9 4771.4 3510.5 3271.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8550500 27478 133 25812 51610 41634 41634 1 9606 Homo sapiens 0.022808313411587733 TQIVTEIISEIR Unmodified 1400.7875 0.78749461 4409 Q9BPX3;Q6NUR1;H0Y9Z8 NCAPG Condensin complex subunit 3 yes no 0 0 0 7 0 1 64.532 64.562 3 1.8302E-05 19906 20230619_1887_Aki_TMTPro18x_K_F7 126.1 104.22 25281 20765 12339 22296 12113 22671 21083 23632 27520 25054 23842 26691 28416 18334 22319 23517 34047 26840 23278 19026 13683 22390 12958 22900 20927 24109 27518 25290 24847 26720 28542 19494 23451 23730 32413 25484 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68045000 27479 4409 25813 51611 41635 41635 1 9606 Homo sapiens 0.10313236657748348 TQLAVCQQR Unmodified 1102.5553 0.55532661 3789 Q02790;B2R9U2;H0YFG2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 5.33 3.09 1 1 1 36.084 36.102 2 8.4754E-06 7726 20230619_1887_Aki_TMTPro18x_K_F7 176.79 122.24 351070 242160 318880 330730 356850 374560 341520 334890 448390 200210 190090 148050 166700 147050 236450 157880 254890 137030 324060 222570 327190 327230 367360 374470 348390 341330 439700 208510 206030 152840 174420 152290 239730 157610 242880 130810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 554760000 27480 3789 25814 51612;51613;51614 41636;41637;41638 41637 3 9606 Homo sapiens 0.008151158260034208 TQLIAHDK Unmodified 924.50288 0.50288033 838 A0A8I5QKQ1;A0A8I5KT41;A0A8I5KQ63;A0A8I5KTU5;A0A087WWI6;A0A8I5KRG1;P61962 DCAF7 DDB1- and CUL4-associated factor 7 yes no 0 0 0 6.5 0.5 1 1 37.774 37.844 3 0.0011366 8644 20230619_1886_Aki_TMTPro18x_K_F6 117.67 104.16 144860 80574 130860 140640 150810 152730 146590 144150 184700 152580 205990 191230 204130 176960 169880 141120 231040 197630 133570 74364 134430 137150 154940 153270 149250 148120 186680 155020 210100 191880 206820 181170 176540 145680 220240 187230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259950000 27481 838 25815 51615;51616 41639;41640 41639 2 9606 Homo sapiens 0.037609007547075635 TQLQLDER Unmodified 1001.5142 0.5141733 2860 D9HTE9;Q6LAP8;P53007 SLC25A1 Tricarboxylate transport protein, mitochondrial yes no 0 0 0 2 0 1 39.991 40.061 2 0.0051338 9849 20230619_1881_Aki_TMTPro18x_K_F2 123.35 58.643 130090 104620 121650 127370 144510 154750 150800 151570 184740 149850 179760 158720 174610 145060 171520 156370 161790 154350 120210 95984 124660 127130 148490 154350 152710 154990 185930 151880 184310 160350 178170 150690 173840 156920 154840 146650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79829000 27482 2860 25816 51617 41641 41641 1 9606 Homo sapiens 0.013476780581868297 TQLVWLVR Unmodified 1013.6022 0.60220045 4094 Q68E01-2;Q68E01 INTS3 Integrator complex subunit 3 yes no 0 0 0 5 0 1 59.133 59.187 2 0.037663 17556 20230619_1885_Aki_TMTPro18x_K_F5 80.438 62.453 94564 86730 98649 91095 91160 107360 114720 108930 114650 103650 83528 72256 90942 74281 95125 98331 94709 92685 87538 79422 99735 91928 95922 107380 114290 111010 115590 104100 87457 74896 92776 77874 96650 98101 90607 88100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61247000 27483 4094 25817 51618 41642 41642 1 9606 Homo sapiens 0.09594343439471231 TQLYEYLQNR Unmodified 1326.6568 0.65681479 4712 Q9Y2X3;B3KN82;H7BZ72 NOP58 Nucleolar protein 58 yes no 0 0 0 4.5 3.5 1 1 54.066 54.102 2;3 1.4714E-10 16041 20230619_1880_Aki_TMTPro18x_K_F1 182.16 154.73 97457 88089 94635 104830 104630 114480 117010 105000 117420 111050 111060 102410 117140 100330 117900 112490 117960 124330 90153 80762 96590 104620 108190 114830 117250 108130 119360 111670 114490 104320 119400 104240 119850 113530 112900 117940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139760000 27484 4712 25818 51619;51620 41643;41644 41643 2 9606 Homo sapiens 0.006552657295742392 TQMAEVLPSPR Oxidation (M) 1243.6231 0.62307182 3433 P11388;P11388-2;P11388-3;P11388-4 TOP2A DNA topoisomerase 2-alpha yes no 0 1 0 5 0 1 40.231 40.321 2 0.0016946 9677 20230619_1885_Aki_TMTPro18x_K_F5 94.465 58.522 38340 30597 32314 38921 37074 37323 36114 39483 44179 38786 52131 44520 40716 34650 40255 42169 39113 43755 35400 28083 33431 38596 38106 37921 36737 40170 44822 39409 52554 44639 41884 36463 40894 42341 37466 41525 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26200000 27485 3433 25819 51621 41645 41645 2061 1 9606 Homo sapiens 0.011005209661334447 TQMLDQEELLASTR Oxidation (M) 1649.7931 0.79305028 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 1 0 3 0 1 49.544 49.622 2 1.6979E-07 13940 20230619_1882_Aki_TMTPro18x_K_F3 138.35 121.97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27486 2727 25820 51622 41646 41646 1636 1 9606 Homo sapiens -0.005854526127450299 TQMTSAVR Unmodified 892.44365 0.44365089 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7 0.816 1 1 1 33.235 33.278 2 0.00033699 6601 20230619_1887_Aki_TMTPro18x_K_F7 166.3 116.94 94025 44906 98600 103360 111320 132520 98688 132270 155310 75116 97738 113640 116400 102560 84696 60159 149280 110230 86752 41668 100000 99858 114470 131610 102040 133520 152450 80292 103860 113160 116820 103950 90075 64044 141940 104310 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 65198000 27487 3758 25821 51623;51624;51625 41647;41648;41649 41648 3 9606 Homo sapiens -0.006873185311292218 TQNLPNCQLISR Unmodified 1442.73 0.72999651 3562 Q6IAX1;P37268-5;P37268;E9PNM1;B4DND3;A0A1W2PQ47;B7Z9R8;P37268-3;P37268-2;P37268-4;B4DWP0 FDFT1 Squalene synthase yes no 0 0 0 1.5 0.5 1 1 45.351 45.392 2 2.6195E-09 12453 20230619_1880_Aki_TMTPro18x_K_F1 179.35 146.51 186170 155220 165840 167680 81527 102570 133490 137600 156160 174360 140430 97602 171010 119880 97734 242970 175630 126750 172020 142220 168880 167600 92930 109540 132420 139180 157320 171880 145770 103690 170020 129440 105770 235220 166950 121800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152230000 27488 3562 25822 51626;51627 41650;41651 41650 2 9606 Homo sapiens 0.026340711805232786 TQNVLGEK Unmodified 887.47125 0.47124585 3494 P23396;P23396-2;Q53G83;E9PL09;E9PPU1;H0YCJ7;F2Z2S8;H0YF32;E9PK82;E9PJH4;E9PQ96 RPS3 40S ribosomal protein S3 yes no 0 0 0 6 0.816 1 1 1 42.435 42.519 2 0.00142 10529 20230619_1886_Aki_TMTPro18x_K_F6 159.1 80.777 514720 237790 622760 616330 829410 930760 658950 817670 724260 543090 834170 899510 820120 726880 788980 364170 917600 832920 475480 221210 626670 594640 840470 913730 676970 835270 737760 574580 850580 890380 836120 736660 807430 399570 876120 786460 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1010199999.9999999 27489 3494 25823 51628;51629;51630 41652;41653;41654 41653 3 9606 Homo sapiens 0.023009080007568627 TQPDGTSVPGEPASPISQR Unmodified 1922.9334 0.93338358 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 3.5 0.5 1 1 43.837 43.894 3 8.7938E-11 11193 20230619_1883_Aki_TMTPro18x_K_F4 128.1 116.82 46324 35553 45837 47549 59259 44800 50819 54777 49041 49861 65814 54724 57214 45648 66539 34652 54508 54518 42814 32655 46785 47008 60086 45789 51710 55132 50723 50773 66309 55030 59054 46852 66654 36220 52269 51571 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170420000 27490 349;3906 25824 51631;51632 41655 41655 1 9606 Homo sapiens 0.008834226452336225 TQPIVEILLK Unmodified 1152.7118 0.71181048 775 B7ZBJ4;Q5TAW7;A0A024RDT3;Q9H9S4 CAB39L Calcium-binding protein 39-like yes no 0 0 0 2 0 1 64.217 64.225 2 0.0045054 20482 20230619_1881_Aki_TMTPro18x_K_F2 93.058 4.6168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27491 775 25825 51633 41656 41656 1 9606 Homo sapiens 0.141563042681355 TQPMTAQAASYR Oxidation (M) 1339.619 0.61904908 1111 A0A0S2Z4Z0;Q96PK6;Q59GV2 RBM14 RNA-binding protein 14 yes no 0 1 0 6.5 0.5 1 1 32.917 32.979 2 0.0022628 6475 20230619_1887_Aki_TMTPro18x_K_F7 90.149 82.5 51342 36197 39891 47346 64501 66691 59237 58485 60694 36292 40617 37153 31364 28066 49062 41173 38584 31507 47346 33250 41891 47130 64894 65775 60042 59712 60875 37931 42232 37417 33158 29919 48956 40653 36969 30054 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100770000 27492 1111 25826 51634;51635 41657;41658 41658 685 2 9606 Homo sapiens -0.037175685275769865 TQPMTAQAASYR Unmodified 1323.6241 0.62413446 1111 A0A0S2Z4Z0;Q96PK6;Q59GV2 RBM14 RNA-binding protein 14 yes no 0 0 0 7.5 0.5 1 1 38.073 38.098 2 1.0444E-12 8692 20230619_1888_Aki_TMTPro18x_K_F8 203.61 141.65 112640 94775 110270 113330 117850 139080 130470 125670 137480 89667 84909 67271 78610 72633 99817 110110 97707 63366 104150 86918 112370 113270 122210 138350 131000 128350 137430 91975 89262 69661 81516 76643 101060 107410 93268 60807 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 111640000 27493 1111 25826 51636;51637 41659;41660 41660 2 9606 Homo sapiens -0.024732646649681556 TQPPEDISCIAWNR Unmodified 1685.7832 0.78315429 762 O94979-9;D6REX3;O94979-6;O94979-3;O94979-4;O94979-10;O94979-2;O94979;O94979-8;A0A1S5UZ19;A1LU61;A0A024RDH6;D6RHZ5;O94979-5;H0Y9T9 SEC31A;SEC31L1 Protein transport protein Sec31A yes no 0 0 0 5.5 0.5 1 1 53.53 53.603 3 4.028E-05 15434 20230619_1886_Aki_TMTPro18x_K_F6 104.08 89.924 77901 59971 84702 89883 93066 93387 103880 93063 106080 104750 110300 97911 101160 82405 116610 105310 94980 104640 72059 55154 85636 88330 96178 94155 104160 95440 108110 105030 112540 99225 104210 86754 117050 105460 91152 99355 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207000000 27494 762 25827 51638;51639 41661 41661 1 9606 Homo sapiens -0.03230595827471916 TQPTYPSVK Unmodified 1019.5288 0.52876073 1781 Q6NUN2;A3F769;A3F768;A0A8I5KX72;O15226;O15226-2;A2I829 NKRF;NRF NF-kappa-B-repressing factor yes no 0 0 0 8 0 1 42.817 42.82 2 0.003659 10619 20230619_1888_Aki_TMTPro18x_K_F8 106.42 81.529 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27495 1781 25828 51640 41662 41662 1 9606 Homo sapiens 0.019777502063334396 TQPVPESQLLPGQR Unmodified 1548.826 0.82600539 3404 Q6NUK7;P07948-2 LYN Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lyn yes no 0 0 0 6 0 1 47.194 47.275 2 5.4495E-09 12697 20230619_1886_Aki_TMTPro18x_K_F6 201 133.1 18661 16821 15016 21284 18017 19799 16560 14726 19700 19880 20846 19529 22312 17935 21711 20604 23803 23060 17238 15432 15638 21092 18452 20021 16877 15550 19946 19813 21392 19790 22691 18705 22196 20804 22749 21879 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21639000 27496 3404 25829 51641 41663 41663 1 9606 Homo sapiens 0.07354542292250699 TQPVREPSAPK Unmodified 1208.6513 0.65133548 3082 H7BYX6 NCAM1 no no 0 0 1 7 0.816 1 1 1 34.509 34.547 3 0.00010709 7111 20230619_1887_Aki_TMTPro18x_K_F7 122.34 97.712 97660 76505 112790 179700 100070 94843 140880 147910 163520 109250 151600 159780 123080 128410 146960 99111 210810 169300 90396 70840 113530 171640 105880 103420 140380 146570 164510 114030 154950 158790 127910 131910 152240 104160 200800 160210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91796000 27497 3082 25830 51642;51643;51644 41664 41664 1 9606 Homo sapiens 0.05535586937753578 TQQAAQANITLQEQIEAIHK Unmodified 2234.1655 0.16550878 146 A0A024R1K8;Q15459;Q15459-2;B4E091;H7C1L2 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 8 0 1 54.226 54.298 3 2.5459E-11 15395 20230619_1888_Aki_TMTPro18x_K_F8 130 105.2 16735 10471 13646 15965 17314 14005 15867 15122 16936 16658 16964 17436 21270 15495 20227 20264 23040 21056 15428 9640.8 14180 15639 17622 14346 16115 15421 17206 16775 17601 17605 21508 16314 20740 20330 22004 19998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65037000 27498 146 25831 51645 41665 41665 1 9606 Homo sapiens 0.09779264995950143 TQQHYYERDPK Unmodified 1463.6793 0.67934115 3432 Q59GM9;P11216 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 1 5.5 0.5 1 1 31.397 31.453 4 5.3927E-05 6189 20230619_1885_Aki_TMTPro18x_K_F5 139.78 107.87 74690 61742 73109 75700 102240 91939 87629 95872 98814 99810 134800 124900 112190 95557 113580 120560 144870 117880 69056 56641 74825 75532 103350 91882 89595 97740 101430 101390 135550 124740 115310 100830 117230 120590 138120 112090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91297000 27499 3432 25832 51646;51647 41666 41666 1 9606 Homo sapiens -0.03395134872857852 TQQLLER Unmodified 886.48723 0.48723027 2259 B2R894;Q96DV4 MRPL38 39S ribosomal protein L38, mitochondrial yes no 0 0 0 5.5 0.5 1 1 38.792 38.879 2 0.007899 9036 20230619_1885_Aki_TMTPro18x_K_F5 121.58 62.761 83630 64818 81250 93839 102000 118220 107920 101710 148000 84455 96174 81919 98526 84570 84387 96877 105430 79446 77286 59585 83144 92640 104580 117250 109620 104590 146220 86370 101100 83473 99863 87771 87278 96161 100490 75738 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146260000 27500 2259 25833 51648;51649 41667 41667 1 9606 Homo sapiens 0.03944614237661881 TQQMLHGLQR Oxidation (M) 1226.619 0.6189895 577 A0A024R9J0;O60216;B3KUT8 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 1 0 8 0 1 31.591 31.596 3 0.011912 6205 20230619_1888_Aki_TMTPro18x_K_F8 65.056 55.623 12647 11204 14244 13022 18853 16960 17204 14650 16273 10469 13980 10638 11114 10008 11327 9530.9 13169 12351 11713 10270 14395 13057 19132 16810 17407 15020 16517 10823 14306 10785 11450 10322 11606 9749.7 12577 11704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12100000 27501 577 25834 51650 41668 41668 341 1 9606 Homo sapiens 0.014744762630925834 TQQYPHLHQQNR Unmodified 1548.7546 0.75457178 1784 A0A8I5KXR5;Q9HCD6;Q9HCD6-2 TANC2 Protein TANC2 yes no 0 0 0 8 0 1 27.555 27.585 3 0.014594 4835 20230619_1888_Aki_TMTPro18x_K_F8 63.727 56.183 1342.3 0 1179.2 1897.8 0 750.96 1977.7 1788.9 1162.3 0 1077.2 0 0 1081 1126.5 1040.1 859.72 891.1 1232.2 0 1200.1 1741.2 0 863.27 1853.4 1710.5 1216.9 0 1057.2 0 0 1072.2 1110.8 1037.9 825.37 847.84 1 0 1 1 0 1 1 1 1 0 1 0 0 1 1 1 1 1 1192900 27502 1784 25835 51651 41669 41669 1 9606 Homo sapiens 0.0021446737828227924 TQRPADVIFATVR Unmodified 1472.81 0.80996139 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;B3KUD7;B4DDF5;P33993-3;Q9H4N9 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 1 3.5 0.5 1 1 48.262 48.322 3 1.0171E-10 13373 20230619_1882_Aki_TMTPro18x_K_F3 144.8 111.6 469800 370380 379370 404540 330530 484250 431320 424710 500810 333030 324230 287740 349710 290800 423680 333840 311150 281650 433620 339470 392470 406880 351150 482030 431110 435560 498680 340520 342090 294510 359530 302140 422810 332220 298590 268180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 626600000 27503 1091 25836 51652;51653 41670 41670 1 9606 Homo sapiens 0.09246880846012573 TQSEQVYSFVTPTFDQVSPSR Unmodified 2402.139 0.13901926 3627 P51805 PLXNA3 Plexin-A3 yes yes 0 0 0 7 0 1 60.898 60.941 3 0.0030431 18225 20230619_1887_Aki_TMTPro18x_K_F7 67.413 57.832 25941 22349 28942 31371 24452 25966 25209 29658 34759 33664 34876 30301 33469 29316 36117 36320 32287 37757 24018 20529 29091 30866 25775 26750 25696 30146 34874 33706 35690 30903 34329 30648 36472 36465 30967 35826 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10526000 27504 3627 25837 51654 41671 41671 1 9606 Homo sapiens -0.005964686860806978 TQSINSAFAELR Unmodified 1335.6783 0.67827852 2424 Q32LY2;B3KV85;P61296-2;P61296 HAND2 Heart- and neural crest derivatives-expressed protein 2 yes no 0 0 0 7.5 0.5 1 1 53.798 53.867 2 0.055644 15233 20230619_1887_Aki_TMTPro18x_K_F7 62.894 44.222 88094 78942 87312 93029 80469 78704 84224 89567 89110 92333 94532 89776 91157 85692 98378 94867 87696 89754 81501 72371 88667 92638 84142 80973 84920 90839 90752 93067 96586 91137 93520 88973 99304 94928 84025 85295 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 362920000 27505 2424 25838 51655;51656 41672 41672 1 9606 Homo sapiens 0.023866507582852137 TQSPCFGDDDPAK Unmodified 1436.5878 0.58780853 897 A0A090N7T9;Q12765;Q12765-2;A0A024RA21;Q12765-3;B4DH22;B4DIV7 SCRN1 Secernin-1 yes no 0 0 0 2.5 0.5 1 1 44.394 44.471 3 0.036645 11622 20230619_1882_Aki_TMTPro18x_K_F3 47.639 35.279 84898 54892 87333 99009 113920 121040 95552 105920 128210 111800 138890 142110 121270 112210 113190 114680 142210 141180 78419 50645 88970 96553 115750 120310 98457 109390 129120 113620 141230 141840 124020 116840 116850 116700 135780 133820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176570000 27506 897 25839 51657;51658 41673 41673 1 9606 Homo sapiens -0.11302186352327226 TQSPCFGDDDPAKK Unmodified 1564.6828 0.68277155 897 A0A090N7T9;Q12765;Q12765-2;A0A024RA21;Q12765-3;B4DH22;B4DIV7 SCRN1 Secernin-1 yes no 0 0 1 4 0 1 42.932 42.975 3 6.0191E-05 10854 20230619_1883_Aki_TMTPro18x_K_F4 98.943 88.844 71700 53101 60505 86614 56084 77599 66191 81149 93042 95766 119230 142660 118130 115920 77995 158940 173700 171050 66174 48896 62501 84516 59080 79148 67044 83059 94279 97404 121130 141820 118910 122640 85745 159430 165250 162350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87543000 27507 897 25840 51659 41674 41674 1 9606 Homo sapiens -0.07698252881141343 TQSPCFGDDDPAKKEPR Unmodified 1946.8792 0.87923952 897 A0A090N7T9;Q12765;Q12765-2;A0A024RA21;Q12765-3;B4DH22;B4DIV7 SCRN1 Secernin-1 yes no 0 0 2 4.5 0.5 1 1 40.432 40.497 4 5.5716E-06 9759 20230619_1883_Aki_TMTPro18x_K_F4 103.41 84.653 235730 304460 340050 299770 377200 297670 389390 298520 199510 300690 374270 166290 173970 114300 515820 79285 121210 72451 219560 278380 336970 303420 387400 301740 386130 305210 221110 299330 366320 173480 199330 118050 494310 81326 119450 69065 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 212550000 27508 897 25841 51660;51661 41675;41676 41675 2 9606 Homo sapiens -0.05632492778067899 TQSRPGGPPNPPGPSPK Unmodified 1669.8536 0.85361712 1591 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A669KAV7;O95785-4;O95785-3;A0A2R8YFV2;O95785;B3KR89;O95785-2 WIZ Protein Wiz yes no 0 0 1 2.5 0.5 1 1 35.838 35.895 3 0.0019235 7934 20230619_1882_Aki_TMTPro18x_K_F3 71.601 56.399 28822 25227 25082 25954 34654 31407 33419 34095 35266 31272 43587 34916 40360 33758 32583 37779 43502 33887 26633 23101 25934 26242 35156 31435 33828 34561 36124 31871 44117 35294 40924 35067 33897 37673 41450 32262 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21574000 27509 1591 25842 51662;51663 41677;41678 41678 2 9606 Homo sapiens 0.0454844555249565 TQSSASLAASYAAQQHPQAAASYR Unmodified 2464.1731 0.17311336 1111 A0A0S2Z4Z0;Q96PK6;Q59GV2;B4DNG4 RBM14 RNA-binding protein 14 yes no 0 0 0 2 0 2 42.977 43.058 3;4 1.3616E-103 11238 20230619_1881_Aki_TMTPro18x_K_F2 353.27 325.13 84209 69011 89951 99945 89868 103580 96477 89549 98866 115610 110410 111870 118550 85417 95688 124150 128490 125370 77910 63426 90961 98387 93532 104110 96990 93188 101160 115290 113090 112830 119570 91114 99669 124110 122600 119080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 365860000 27510 1111 25843 51664;51665 41679;41680 41680 2 9606 Homo sapiens -0.0004062747439093073 TQSSLVPALTDFVR Unmodified 1532.8199 0.81985737 2730 C9IZG4;O60888-3;O60888;O60888-2 CUTA Protein CutA yes no 0 0 0 1.5 0.5 1 1 62.5 62.505 2 1.4925E-11 19708 20230619_1881_Aki_TMTPro18x_K_F2 229.63 201.12 492520 335540 448210 488230 347500 484400 469360 440940 529360 550320 543480 619680 627630 543080 594490 639280 597940 644640 454610 308630 457840 480260 373140 488740 468140 456650 536630 552440 561240 623100 636360 567730 605550 641090 572400 612050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 268220000 27511 2730 25844 51666;51667 41681;41682 41682 2 9606 Homo sapiens 0.0747602406072474 TQTAIASEDMPNTLTEAEK Unmodified 2048.9572 0.95721507 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 53.108 53.154 3 3.0901E-26 15830 20230619_1881_Aki_TMTPro18x_K_F2 175.33 161.9 105770 82780 100710 107500 96272 119480 110910 112930 125670 126570 126040 127430 138310 111590 124790 145030 136640 155090 97736 76001 102720 106680 100870 119720 111460 116180 127240 127210 129850 128820 140100 117460 127910 145700 130750 147130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 509090000 27512 2337;3778;3779 25845 51668;51669 41683;41684;41685 41684 3 9606 Homo sapiens -0.025305247032974876 TQTAIASEDMPNTLTEAEK Oxidation (M) 2064.9521 0.95212969 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 1 0 3 0 1 47.841 47.92 3 1.5774E-10 13215 20230619_1882_Aki_TMTPro18x_K_F3 133.16 123.63 17531 13547 15772 19818 18264 17235 24636 23543 26066 20618 22139 26706 24003 17989 22306 27772 21976 28651 16192 12455 16233 19461 18920 17769 24499 23546 26297 21173 23016 26539 24342 19368 22728 27780 21076 27179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80124000 27513 2337;3778;3779 25845 51670 41686 41686 1455 1 9606 Homo sapiens -0.03774828565883581 TQTFSGDFMHR Oxidation (M) 1341.5772 0.57718426 1869 B4DN92;A0A994J7M5;A0A994J4W5;A8K285;A8K0M6;H3BTS6;Q8NBN3;A8K369;Q8NBN3-2;Q8NBN3-3 TMEM87A Transmembrane protein 87A yes no 0 1 0 6 0 1 38.782 38.864 3 4.7752E-05 9075 20230619_1886_Aki_TMTPro18x_K_F6 127.52 116.61 21311 20351 22915 21232 29165 30028 29538 26109 34807 22621 23862 22279 21725 18350 23998 21150 26483 20475 19738 18633 23230 21497 29791 29620 29902 26852 34687 23066 24901 22504 22357 19207 24482 21184 25273 19477 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22838000 27514 1869 25846 51671 41687 41687 1204 1 9606 Homo sapiens -0.07994124216088494 TQTPAAQPVPR Unmodified 1164.6251 0.62512073 1500 A0A3B3IRP5;Q6P1J9;A0A0S2Z5M9;A0A1B0GUB2;A0A0S2Z5N1 CDC73 Parafibromin yes no 0 0 0 6.5 0.5 1 1 33.557 33.618 2 1.6613E-08 7115 20230619_1886_Aki_TMTPro18x_K_F6 176.33 121.8 48602 25767 42690 51378 60980 72465 55936 49553 82643 53568 71970 74187 82553 67625 58099 53611 82821 80770 44796 23835 44194 49975 61865 71089 57472 52342 82148 54650 74780 74126 82759 69276 60840 55644 78989 76436 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54469000 27515 1500 25847 51672;51673 41688;41689 41688 2 9606 Homo sapiens 0.04939317766275053 TQTPPLGQTPQLGLK Unmodified 1577.8777 0.8777066 3752 P78344;P78344-2;B4DZF2;Q59G42;D3DQV9;H0Y3P2;Q2TU89;E9PKF8 EIF4G2;AAG1 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 2.5 0.5 1 1 54.251 54.286 3 4.6406E-14 16065 20230619_1882_Aki_TMTPro18x_K_F3 141.34 126.14 123400 98943 103190 123190 105030 129290 120670 120610 147060 139520 134340 140550 138300 123580 134460 158440 147490 144620 113940 90793 106670 122470 109560 130050 121570 124340 147830 140050 138660 142070 140900 129830 137650 157820 140970 137520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152540000 27516 3752 25848 51674;51675 41690 41690 1 9606 Homo sapiens 0.11188285986190749 TQTPPVSPAPQPTEER Unmodified 1733.8584 0.85842773 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;B3KRK4;B4E358;H0YCD9;H0YEV2 CTTN Src substrate cortactin yes no 0 0 0 3 0 1 38.721 38.774 2 0.00048743 9068 20230619_1882_Aki_TMTPro18x_K_F3 116.98 101.09 18093 10769 13384 16439 16895 19271 22648 20717 22538 20051 23903 29479 24180 20341 20104 22351 26430 26621 16666 9917.9 14066 16164 17435 19293 22484 21054 23005 20581 24508 29166 24479 21389 20876 22662 25228 25238 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19965000 27517 1413 25849 51676 41691 41691 1 9606 Homo sapiens 0.020852849045922994 TQTQRPNLIGLTSGDMDVNPR Unmodified 2312.1543 0.15429217 2447 B3KY61;U3KPZ7;Q9P2N5;D3DQF6 RBM27;POU4F3 RNA-binding protein 27 yes no 0 0 1 8 0 1 49.891 49.963 3 0.0023928 13503 20230619_1888_Aki_TMTPro18x_K_F8 69.704 60.123 43412 30482 39011 41110 36236 46179 45589 47269 49005 52442 50960 54259 57084 46916 49078 60504 57161 59274 40073 28010 39976 40708 38166 46311 45541 48342 49835 52764 52482 54752 57681 49362 50557 60479 54628 56304 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48365000 27518 2447 25850 51677 41692 41692 1 9606 Homo sapiens 0.05070119630136105 TQTSDPAMLPTMIGLLAEAGVR Oxidation (M) 2287.1552 0.15520337 1334 O43175;A0A286YF22;V9HW79;B3KSC3;A0A286YFA2;Q9UMY2;Q8N5M8;Q9UMY3 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase yes no 0 1 0 3.67 3.09 1 1 1 65.28 65.29 3 4.3427E-13 20063 20230619_1888_Aki_TMTPro18x_K_F8 142.99 130.63 11612 8678.2 10416 10561 12457 11792 7551.7 11268 11520 11503 16128 15788 13880 12646 15302 15258 14135 16420 10723 7963.8 10704 10529 12644 11825 8041.8 11545 11693 11741 16231 15736 14306 13281 15472 15356 13552 15575 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42072000 27519 1334 25851 51678;51679;51680 41693;41694;41695 41695 847 3 9606 Homo sapiens 0.06311197954892123 TQTSDPAMLPTMIGLLAEAGVR Unmodified 2271.1603 0.16028875 1334 O43175;A0A286YF22;V9HW79;B3KSC3;A0A286YFA2;Q9UMY2;Q8N5M8;Q9UMY3 PHGDH;HEL-S-113;PGDH3 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 2 0 1 66.459 66.466 3 7.6349E-24 21384 20230619_1881_Aki_TMTPro18x_K_F2 189.19 177.55 16758 12705 14211 16398 13401 11758 12685 12883 15255 16026 20746 29017 20467 19967 25820 17705 23968 28550 15469 11665 14641 16196 13952 12278 12924 13186 15614 16414 21084 28521 21165 20769 26015 18462 22982 26985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113140000 27520 1334 25851 51681 41696 41696 1 9606 Homo sapiens 0.07555501817478216 TQTVCNFTDGALVQHQEWDGK Unmodified 2433.1019 0.10192225 2888 E7DVW5;Q01469;I6L8B7;A8MUU1 FABP5;FABP5P3 Fatty acid-binding protein, epidermal;Putative fatty acid-binding protein 5-like protein 3 yes no 0 0 0 5.4 1.36 1 1 2 1 54.796 54.859 3 5.362E-55 15762 20230619_1885_Aki_TMTPro18x_K_F5 268.09 250.5 458890 404900 451100 488270 364350 435990 438290 494200 497430 586370 525010 544480 715070 563180 470550 771000 676660 694590 424470 371300 457820 485700 387640 446180 439850 503210 505220 586210 545560 555620 712050 591480 495820 766210 645560 660470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2173800000 27521 2888 25852 51682;51683;51684;51685;51686 41697;41698;41699;41700 41698 4 9606 Homo sapiens -0.057304635034597595 TQTVENVEHLQTR Unmodified 1553.7798 0.77978347 3248 Q3B768;O43156 KIAA0406;TTI1 TELO2-interacting protein 1 homolog yes no 0 0 0 4 0 1 39.529 39.571 3 4.4586E-11 9353 20230619_1883_Aki_TMTPro18x_K_F4 157.68 138.44 40931 34486 43596 44859 46584 52203 46158 46084 57864 53620 55420 57937 60887 49699 51444 61429 63103 61950 37875 31654 44116 44541 48155 52086 46935 47705 58194 53933 57223 58341 61517 52167 53175 61542 60255 58839 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37138000 27522 3248 25853 51687 41701 41701 1 9606 Homo sapiens 0.025044773901754525 TQTVQAHYVLK Unmodified 1286.6983 0.69828568 2768 CON__ENSEMBL:ENSBTAP00000024146 yes yes 0 0 0 1.5 0.5 1 1 42.005 42.045 3 4.5E-05 10745 20230619_1881_Aki_TMTPro18x_K_F2 116.54 75.255 + 103990 137470 149340 99213 380950 414760 264870 264080 388350 147850 203300 239680 130620 141800 210810 144750 216000 246270 96875 125420 151170 107560 374310 392050 277230 276740 380480 159000 214460 235730 139760 149590 212880 151290 206820 232720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73495000 27523 2768 25854 51688;51689 41702 41702 1 9606 Homo sapiens 0.06640446488881935 TQTVTISDNANAVK Unmodified 1460.7471 0.74708636 3431 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;P11171-5;Q4VB87;A0A3B3ITP0;A0A2R8Y7Y3;P11171-6;B7Z5L2;A0A2R8Y783 EPB41 Protein 4.1 yes no 0 0 0 6 0 1 44.834 44.923 3 1.7544E-16 11675 20230619_1886_Aki_TMTPro18x_K_F6 204.35 177.64 192500 151790 176410 163670 156290 194040 168270 159650 230950 212210 234740 247880 229070 247890 214630 274760 281460 270260 177830 139100 180160 164790 164590 193140 170960 166920 231800 212890 240480 250060 233730 256850 222530 275270 268580 256780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199340000 27524 3431 25855 51690 41703 41703 1 9606 Homo sapiens 0.035142702673283566 TQVAGGQLSFK Unmodified 1134.6033 0.60332266 162 A0A024R1U0;P46060;B0QYT5;B0QYT4;B0QYT6 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 0 2 0 1 49.264 49.323 3 5.4783E-06 14121 20230619_1881_Aki_TMTPro18x_K_F2 144.92 113.42 132590 107210 113990 127150 136200 154220 140320 146830 168860 170880 169400 155500 201890 151310 156710 194850 168730 155940 122450 98330 117770 127120 139940 153730 142130 151100 170530 170960 175060 158510 202730 158570 161020 192830 161240 148570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 346810000 27525 162 25856 51691 41704 41704 1 9606 Homo sapiens 0.04140513017705416 TQVAIVR Unmodified 785.47594 0.4759373 2082 A8K5Y7;Q9HAV4;E2QRM3 XPO5 Exportin-5 yes no 0 0 0 7.5 0.5 1 1 37.382 37.407 2 0.022806 8446 20230619_1888_Aki_TMTPro18x_K_F8 101.41 50.446 197860 136000 169470 197930 217270 201690 209820 203180 250780 227740 250420 249930 276090 225720 215130 253590 328010 288230 182560 125090 175360 194760 221510 203750 213220 208180 253140 229570 258000 251920 278130 235210 226240 256210 312470 273540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 155560000 27526 2082 25857 51692;51693 41705 41705 1 9606 Homo sapiens 0.07461836934169241 TQVDAQLQVVR Unmodified 1255.6884 0.68844927 4076 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 0 0 0 6 0 1 44.859 44.948 2 5.662E-11 11668 20230619_1886_Aki_TMTPro18x_K_F6 157.97 122.09 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27527 4076 25858 51694 41706 41706 1 9606 Homo sapiens 0.07083258483498867 TQVEASEESALNHLQNPGDAAEGR Unmodified 2522.1633 0.16333653 2385 B3KQA0;Q9Y605 MRFAP1 MORF4 family-associated protein 1 yes no 0 0 0 2 0 1 48.76 48.825 3 4.1123E-44 13905 20230619_1881_Aki_TMTPro18x_K_F2 225.17 222.33 25546 18576 19563 25174 23693 33321 23707 30006 30865 34959 31325 27419 36534 27806 27860 35816 30511 32924 23559 17068 20474 24971 24370 32973 24137 30982 31094 34832 32308 28207 36686 29114 28674 35678 29184 31293 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41345000 27528 2385 25859 51695 41707 41707 1 9606 Homo sapiens -0.03685860270434205 TQVLSPDSLFTAK Unmodified 1405.7453 0.74529545 1289 P55196-5;A8MQ02;P55196;P55196-1;H0Y8U8;A0A804HJ20;A0A1P7ZIN0;G1UI22;J3KN01;H0Y948;H0Y8L4 MLLT4 Afadin yes no 0 0 0 1 0 1 61.159 61.159 3 0.058396 18934 20230619_1880_Aki_TMTPro18x_K_F1 52.201 37.848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27529 1289 25860 51696 41708 41708 1 9606 Homo sapiens 0.058652612493460765 TQVSAVVQR Unmodified 986.55089 0.55089316 2296 K7ENN8;B3KP96;B3KMJ2;B2RB95;H0Y626;Q59EB2;O95361-2;O95361 TRIM16 Tripartite motif-containing protein 16 yes no 0 0 0 8 0 1 36.627 36.614 2 0.001843 8119 20230619_1888_Aki_TMTPro18x_K_F8 112.01 84.174 19900 13621 16511 21115 38060 43732 34955 30571 47512 26022 34628 34033 26815 25559 35480 21600 38383 33230 18357 12538 17420 20971 37786 42180 35756 32013 47091 26842 35802 33888 28057 26435 36005 22468 36661 31457 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13611000 27530 2296 25861 51697 41709 41709 1 9606 Homo sapiens 0.057079746747604077 TQVTVQYMQDR Oxidation (M) 1383.6453 0.64526383 1192 A0A140VJP5;P31153;B4DEX8;P31153-2 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase yes no 0 1 0 5.67 0.471 1 2 39.145 39.234 2 0.00078461 8987 20230619_1885_Aki_TMTPro18x_K_F5 103.43 66.089 97227 79290 80761 89361 103800 106070 91313 85751 104790 103980 108760 92205 108790 88797 91658 122230 112980 95286 89775 72685 83787 89635 105650 105580 93209 89506 106190 103790 111270 94128 110210 93463 94848 120700 107770 90854 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 116040000 27531 1192 25862 51698;51699;51700 41710;41711;41712 41710 730 3 9606 Homo sapiens -0.031212993560984614 TQVTVQYMQDR Unmodified 1367.6503 0.65034921 1192 A0A140VJP5;P31153;B4DEX8;P31153-2 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase yes no 0 0 0 6.5 0.5 1 1 43.997 44.084 2 8.7122E-17 11246 20230619_1886_Aki_TMTPro18x_K_F6 231.05 179.98 203790 161880 174450 182750 171630 222310 187000 181160 210940 225220 205170 187910 241200 178370 186470 252460 229830 187680 188180 148410 179680 183380 179270 220820 188430 189080 213490 224150 212190 192250 242280 188280 193320 248700 219190 179100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253220000 27532 1192 25862 51701;51702 41713;41714 41713 2 9606 Homo sapiens -0.018769954934896305 TQYEEHIYR Unmodified 1237.5728 0.57275081 1882 A0A994J7C7;Q96ST3;A0A994J7C5;A0A994J4B6 SIN3A Paired amphipathic helix protein Sin3a yes no 0 0 0 3.5 0.5 1 1 35.524 35.577 3 4.7301E-09 7812 20230619_1882_Aki_TMTPro18x_K_F3 212.03 192.76 41703 34673 41905 43884 60926 54681 55399 49599 64724 42927 56255 52658 44723 44916 49683 46111 58612 52037 38567 31818 42839 43699 61537 54388 56435 50861 64982 44085 57596 52776 46308 46620 50904 46669 55948 49386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56797000 27533 1882 25863 51703;51704 41715 41715 1 9606 Homo sapiens -0.03653265367347558 TQYEELK Unmodified 909.44436 0.4443624 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 3.5 0.5 1 1 43.749 43.806 2 0.020832 11303 20230619_1882_Aki_TMTPro18x_K_F3 104.06 54.017 163610 108290 160170 178970 193250 228990 174490 177870 251590 211620 285230 264040 226260 217950 203320 190060 290030 260510 151080 99782 163610 175410 197890 226450 179440 186160 253010 213800 288240 264060 231940 224830 211850 195470 276460 246790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 141520000 27534 3440 25864 51705;51706 41716 41716 1 9606 Homo sapiens -0.013982006104242828 TQYSSAMLESLLPGIR Unmodified 1764.908 0.90802046 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B3KU93;A0A8V8TQ95;B7Z1H4;B7Z1V9;B3KTP2;H0YCQ5 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 3 0 1 63.806 63.837 3 4.9228E-11 20043 20230619_1882_Aki_TMTPro18x_K_F3 151.1 121.44 82961 66523 89231 86496 68530 100190 86806 92879 105190 75863 68966 74206 80626 67205 58338 83421 80495 92580 76750 61071 89823 85894 73512 100020 87063 94920 104600 77589 72986 75183 80890 70443 61079 83999 76886 87792 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45487000 27535 2933 25865 51707 41717 41717 1 9606 Homo sapiens 0.05616276589057634 TRAEAEAAAVHGAR Unmodified 1408.7171 0.71712364 876 A0A087X0H9;Q5T8P6-5;Q5T8P6-4;Q5T8P6-3;Q5T8P6-2;Q5T8P6;E2PSN0;B4DZH7 RBM26 RNA-binding protein 26 yes no 0 0 1 4.5 0.5 1 1 29.232 29.304 4 9.9206E-05 5265 20230619_1883_Aki_TMTPro18x_K_F4 103.83 91.258 41088 34371 43219 47230 51750 51826 52611 51273 61619 53890 62386 60639 63083 61484 54291 58376 68589 60405 38015 31568 43876 46690 53060 52050 53271 52495 62268 54555 63982 61291 64008 63193 56168 58828 65430 57382 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 96330000 27536 876 25866 51708;51709 41718;41719;41720 41718 3 9606 Homo sapiens 0.029113761126382087 TRAPAEEGAEGPSDTK Unmodified 1614.7485 0.74854293 4300 Q92618 ZNF516 Zinc finger protein 516 yes yes 0 0 1 2 0 1 33.256 33.314 3 0.00043414 7009 20230619_1881_Aki_TMTPro18x_K_F2 127.2 98.223 11157 7232.9 14593 14877 15893 19342 16072 11709 15816 12062 18760 19114 17874 13585 17729 10353 17361 17903 10329 6687 14563 14433 16411 19027 16183 12520 16221 12398 19076 18886 18247 14038 17968 10904 16618 16923 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11644000 27537 4300 25867 51710 41721 41721 1 9606 Homo sapiens -0.03424140434594847 TRDDEPVCGR Unmodified 1203.5302 0.53023407 4555 Q9HDC9;Q9HDC9-2;H0Y512 APMAP Adipocyte plasma membrane-associated protein yes no 0 0 1 1 0 1 26.702 26.702 3 0.00031965 4721 20230619_1880_Aki_TMTPro18x_K_F1 104.52 77.408 6197.1 2676.5 8225.6 9214.2 11104 13216 10423 11308 12129 7505.4 13612 16278 9929.5 12131 12063 5901.6 14690 13947 5728.9 2508 8239 8803.3 11291 12997 10604 11583 12290 8062.4 13756 15969 10379 12309 12339 6504.2 14025 13165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30399000 27538 4555 25868 51711 41722 41722 1 9606 Homo sapiens -0.06338983767227546 TRDDEPVCGRPLGIR Unmodified 1739.8737 0.87370063 4555 Q9HDC9;Q9HDC9-2;H0Y512 APMAP Adipocyte plasma membrane-associated protein yes no 0 0 2 5.5 0.5 2 2 35.619 35.694 3;4 4.6548E-25 7845 20230619_1886_Aki_TMTPro18x_K_F6 228.03 201.33 109940 104430 107820 130460 139790 139010 136470 143490 152300 142850 159690 173860 165280 147790 162560 172320 180740 196570 101740 95770 110310 129710 142470 140060 138290 146260 154550 145340 163860 174210 168450 154590 166410 174100 172860 186390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 596910000 27539 4555 25869 51712;51713;51714;51715 41723;41724;41725 41724 3 9606 Homo sapiens 0.033358732208171205 TRDELDQFLDK Unmodified 1378.6729 0.67285879 2320 B2RDN4;Q14137;A8K3R2;B4DEN9;Q14137-2;A0A075B729 BOP1 Ribosome biogenesis protein BOP1 yes no 0 0 1 4.5 0.5 1 1 54.403 54.419 3 0.00018118 15625 20230619_1885_Aki_TMTPro18x_K_F5 109.96 77.704 174570 142490 163180 193630 182120 191220 195020 183950 257910 216810 210750 191530 238880 212530 204530 274200 249370 257070 161330 130870 167180 191240 188060 193390 197750 189360 257250 216760 219520 196510 241420 221770 211450 273380 238210 244320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 378660000 27540 2320 25870 51716;51717 41726;41727 41727 2 9606 Homo sapiens -0.0013307282420100819 TRDGSDYEGWCWPGSAGYPDFTNPTMR Oxidation (M) 3138.2872 0.28723319 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 1 1 6.5 0.5 1 1 60.753 60.803 3 8.4216E-06 18467 20230619_1886_Aki_TMTPro18x_K_F6 92.363 90.139 29472 26207 28120 25261 31726 30521 29377 33335 30013 36797 38323 36652 37688 34484 34055 45430 40079 44220 27256 23984 28706 25690 32569 30557 29803 33930 30908 36978 38889 37167 38331 36211 35091 45373 38317 41998 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 176090000 27541 3900;2497 25871 51718;51719 41728;41729;41730 41729 1527 3 9606 Homo sapiens -0.19637893556773633 TRDGSDYEGWCWPGSAGYPDFTNPTMR Unmodified 3122.2923 0.29231857 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 1 7 0 1 61.563 61.602 4 1.3627E-08 18500 20230619_1887_Aki_TMTPro18x_K_F7 107.75 104.92 32424 21978 24997 30085 26332 34902 30306 32284 36615 32865 37480 33377 34046 30958 38580 41046 34965 40640 29893 20202 26069 29766 27427 34843 30526 33171 36956 33209 38246 33816 35081 32539 38969 41054 33529 38584 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75140000 27542 3900;2497 25871 51720 41731 41731 1 9606 Homo sapiens -0.18393589694142065 TREEECHFYAGGQVYPGEASR Unmodified 2442.0659 0.065871094 3838 V9HW63;Q13162;A6NG45 HEL-S-97n;PRDX4 Peroxiredoxin-4 yes no 0 0 1 3.62 1.32 2 2 2 1 1 39.626 39.691 3;4 6.274E-23 9451 20230619_1882_Aki_TMTPro18x_K_F3 190.57 185.04 111540 96303 98593 119260 125240 138170 130640 105280 132820 161560 170240 169880 163170 166420 155930 186510 175270 192400 103070 88342 101770 118740 128130 137550 131430 111410 136810 160540 172610 171970 166600 172720 159930 187360 167630 182620 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2051999999.9999998 27543 3838 25872 51721;51722;51723;51724;51725;51726;51727;51728 41732;41733;41734 41733 3 9606 Homo sapiens -0.09747920680365496 TREEIQEVR Unmodified 1158.5993 0.59929991 699 P08559-4;P08559-2;P08559;Q5JPU2;P08559-3;A0A024RBX9;Q53GE3;A5YPB6;A5PHJ9;Q9UNV7;Q6LCA3;Q99724;Q99725;P78557;P29803 PDHA1;PDHA1/LOC79064;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial yes no 0 0 1 2 0.816 1 1 1 31.146 31.196 3 0.00021427 6159 20230619_1881_Aki_TMTPro18x_K_F2 117.02 85.592 182190 140790 171800 179870 225320 220070 223010 232080 273310 209190 253680 233180 243530 209720 223080 237570 268160 239040 168330 129250 176230 178990 229610 219800 226510 235570 274560 213480 260590 234990 247960 218550 229750 238360 255930 227130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 319780000 27544 699 25873 51729;51730;51731 41735;41736;41737 41736 3 9606 Homo sapiens 0.0263442352400034 TREEYEAR Unmodified 1052.4887 0.48868683 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 1 1 0 1 23.266 23.266 3 0.0045581 3863 20230619_1880_Aki_TMTPro18x_K_F1 99.442 71.268 38312 19660 49668 56941 71697 80106 53362 74595 57033 40448 68546 76464 53815 55221 66222 23517 62802 66508 35431 18322 49881 54651 72215 79019 55055 75616 58268 43796 69220 75200 56024 55981 66691 26699 60147 62700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30910000 27545 4666 25874 51732 41738 41738 1 9606 Homo sapiens -0.03545796464254636 TREGNDLYHEMIESGVINLK Unmodified 2317.1372 0.13724512 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079;F8W0P7;H0YI37 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 1 6 0 1 59.343 59.405 3 3.074E-06 17872 20230619_1886_Aki_TMTPro18x_K_F6 86.727 73.878 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27546 3391 25875 51733 41739 41739 1 9606 Homo sapiens 0.03136199024356756 TREPLILEEEREMER Unmodified 1928.9626 0.96257522 4064 Q5TDG3;Q9UNX4;B3KMW5;Q59GA8 WDR3 WD repeat-containing protein 3 yes no 0 0 2 1.5 0.5 1 1 44.091 44.132 4 1.3292E-05 11962 20230619_1880_Aki_TMTPro18x_K_F1 115.31 105.39 16647 11798 12595 13372 16385 18539 16391 14254 17845 16579 18265 14805 21107 15495 13743 16882 25353 20989 15349 10822 13194 13442 16734 18258 16565 14922 18115 16588 18812 15147 21097 16057 14758 17161 24115 19908 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99812000 27547 4064 25876 51734;51735 41740 41740 1 9606 Homo sapiens 0.03525243669764677 TREPVTDNVEK Unmodified 1286.6466 0.64664404 4760 Q9Y6X9;Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 yes no 0 0 1 3.5 0.5 1 1 35.475 35.527 3 0.00038285 7762 20230619_1882_Aki_TMTPro18x_K_F3 104.17 56.616 85294 49849 79894 80694 112490 107290 87880 92498 116420 88126 107490 110150 113520 96875 99731 87075 117270 100540 78687 45948 82070 79258 113530 106130 90926 95382 116570 90040 110970 110340 115020 99850 102540 88479 111920 95416 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 116660000 27548 4760 25877 51736;51737 41741;41742 41741 2 9606 Homo sapiens 0.014786580043164577 TREVLIETAK Unmodified 1158.6608 0.66083754 1161;3805 Q13126-2;Q13126-3;B4DUC8;A0A384ME80;Q13126;Q13126-4;A0A140CZL4;J3QSB7;Q6FHT1;Q6FHP1;A0A140CZL5;Q13126-7;Q13126-6;Q13126-5;A0A140CZL6;Q05DJ2 MTAP S-methyl-5'-thioadenosine phosphorylase;Purine nucleoside phosphorylase no no 0 0 1 6 0.816 1 1 1 41.988 42.072 3 0.00015383 10346 20230619_1886_Aki_TMTPro18x_K_F6 127.52 95.585 279960 214690 224800 227200 247160 265620 250560 276440 331220 309800 316810 362230 354350 278790 249610 419480 435000 388100 258350 196740 233270 229080 255290 266040 255000 282440 332330 312880 327510 362560 355570 297770 266810 416960 414090 369120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 317590000 27549 1161;3805 25878 51738;51739;51740 41743;41744 41743 2 9606 Homo sapiens 0.08785355223290026 TRGDSRPAEAGEAAAGK Unmodified 1642.8023 0.80230983 1040 B7WPD9;A0A0G2JR66;Q2KJY2-2;Q2KJY2 KIF26B Kinesin-like protein;Kinesin-like protein KIF26B yes no 0 0 2 4 0 1 30.77 30.834 4 7.6686E-05 5872 20230619_1883_Aki_TMTPro18x_K_F4 94.569 71.089 20743 16433 22011 16991 19360 20123 22957 26291 27932 25996 32180 27560 31005 26355 27801 24620 36817 31982 19186 15054 22183 17185 20407 20262 23110 26403 28324 26333 32729 27879 31534 27147 28802 25194 35106 30317 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23729000 27550 1040 25879 51741 41745 41745 1 9606 Homo sapiens 0.00662076787807564 TRIEGLLAAFPK Unmodified 1314.766 0.76597131 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;Q6P1Q5;E9PK34 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 1 4 0 2 59.305 59.307 3 0.00019701 18050 20230619_1883_Aki_TMTPro18x_K_F4 108.32 79.56 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27551 2181 25880 51742;51743 41746;41747 41747 2 9606 Homo sapiens 0.12117896419681529 TRKPLEALYGYDYFAR Unmodified 1961.9999 0.99994701 70 A0A024QZY0;Q86WA6-2;Q86WA6 BPHL Valacyclovir hydrolase yes no 0 0 2 4 0 1 54.879 54.891 4 0.0010481 16146 20230619_1883_Aki_TMTPro18x_K_F4 59.9 42.394 79998 75454 89381 91557 97049 96524 107240 100010 103560 83438 85956 87769 80067 63717 104990 94398 80986 74786 74114 69181 90144 91227 100320 97340 107410 101520 104950 85346 88849 88124 83043 68121 104940 93313 77676 71262 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18905000 27552 70 25881 51744 41748 41748 1 9606 Homo sapiens 0.0574270299773616 TRLDCPFFGSPIPTLR Unmodified 1875.9665 0.96653839 1497 D6RBU5;H7BY57;B3KUR8;A0A386QWI1;X6RKN2;B4DRH7;A0A7P0Z4R6;O94856-4;O94856-12;O94856-10;O94856-2;O94856-3;O94856-8;O94856-11;O94856-6;O94856-9;O94856-7;O94856-13;O94856-5;O94856 NFASC Neurofascin yes no 0 0 1 5.5 0.5 1 1 59.436 59.494 3 4.7242E-08 17713 20230619_1885_Aki_TMTPro18x_K_F5 130.27 108.71 22051 21827 23201 21754 15577 20627 17467 25042 26625 27329 27937 21048 25197 21992 26692 25663 28627 28062 20425 19974 23347 21987 16878 21049 17822 25312 26659 27301 28435 21709 25879 22860 27217 25868 27368 26630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23314000 27553 1497 25882 51745;51746 41749 41749 1 9606 Homo sapiens 0.0635937795418613 TRLDSSIR Unmodified 946.51959 0.51959303 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;A0A0J9YXZ5 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 1 8 0 1 31.732 31.738 3 0.012889 6255 20230619_1888_Aki_TMTPro18x_K_F8 67.081 28.905 80882 74031 89067 81508 148810 121690 103000 128500 112530 38699 66465 65420 46471 47241 86321 35699 75815 57930 74907 67821 90587 82290 148260 120260 106840 128290 112030 44809 69564 64647 50029 48695 86204 37475 72517 54852 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30193000 27554 707 25883 51747 41750 41750 1 9606 Homo sapiens 0.04419401640666365 TRNEELAQTWK Unmodified 1374.6892 0.68917755 534 A0A024R8R4;Q8TAT6;Q8TAT6-2;A0A994J7H4;B4DG89;I3L283;I3L3I1;I3L281 NPLOC4 Nuclear protein localization protein 4 homolog yes no 0 0 1 6.5 0.5 1 1 42.329 42.413 3 9.1424E-05 10260 20230619_1887_Aki_TMTPro18x_K_F7 125.89 85.165 312730 255840 337150 326140 368520 413770 413190 387080 468760 420120 429400 437220 450660 347660 433910 405070 460780 396860 289360 234810 340930 324770 381500 411090 415640 398150 472760 423420 443450 439920 458250 364750 442810 405830 440170 377260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 295360000 27555 534 25884 51748;51749 41751;41752 41752 2 9606 Homo sapiens 0.016820531325492993 TRNEMTAEEK Oxidation (M) 1223.5452 0.54521543 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 1 1 2 0 1 27.951 28.025 3 0.058292 4957 20230619_1881_Aki_TMTPro18x_K_F2 53.211 28.42 9888.5 6641.7 16566 14729 28799 29644 19117 26507 20639 15237 23212 31962 20853 20856 25277 9285.5 25452 25359 9184.5 6147.4 16443 14391 28651 28753 19905 26963 21026 16506 23662 31259 21585 21264 25543 10474 24350 23916 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36378000 27556 4746 25885 51750 41753 41753 2895 1 9606 Homo sapiens -0.05761536689897184 TRNEMTAEEK Unmodified 1207.5503 0.55030081 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 1 2.5 0.5 1 1 32.642 32.708 3 1.6214E-05 6772 20230619_1881_Aki_TMTPro18x_K_F2 136.06 103.11 112320 54200 154380 147140 194810 239620 142530 184140 166260 135760 216780 232420 178260 170990 197530 74499 214140 204190 103920 50457 153900 141940 197870 233720 147690 190530 169860 142770 218490 229220 184160 173350 200730 84112 204660 192610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106420000 27557 4746 25885 51751;51752 41754;41755 41754 2 9606 Homo sapiens -0.04517232827288353 TRPAANPIQFTLNK Unmodified 1569.8627 0.86272524 2555 B4DNN4;Q53GZ5;P23921;B4E0I8;E9PL69;B4DXB0;B4DS95;B4DXD1 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 0 0 1 5.5 0.5 1 1 49.711 49.787 3 5.6749E-05 13873 20230619_1886_Aki_TMTPro18x_K_F6 103.39 61.386 332120 269960 327520 345260 383310 427570 380220 373040 401460 322730 339480 245960 310910 206560 370890 246630 253220 200470 307050 247780 334040 343510 393660 424810 384190 383470 405110 326670 349510 252100 320520 216770 368890 245070 243050 191090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1393900000 27558 2555 25886 51753;51754 41756 41756 1 9606 Homo sapiens 0.10058838908844336 TRPDGNCFYR Unmodified 1284.567 0.56695393 4350 Q96FW1;Q659F9;F5H6Q1;B4DPD5;F5GYN4;F5GYJ8 OTUB1;DKFZp564E242 Ubiquitin thioesterase OTUB1 yes no 0 0 1 4.5 3.04 1 1 1 1 34.208 34.241 3 4.5832E-06 7679 20230619_1880_Aki_TMTPro18x_K_F1 164.64 129.23 518190 406420 445890 448040 492050 502430 484370 481730 514180 576570 566790 569070 615970 512670 539430 668920 660020 609020 478480 372550 459580 449970 507090 503730 489910 496060 524740 577270 581210 576270 623500 538940 557220 665970 629980 579270 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 921300000 27559 4350 25887 51755;51756;51757;51758 41757;41758;41759 41757 3 9606 Homo sapiens -0.06394687150668688 TRPEGEPSSLSPEELAFAR Unmodified 2072.0174 0.017447563 4422 Q9BRT9;E5RFF9 GINS4 DNA replication complex GINS protein SLD5;DNA replication complex GINS protein SLD5, N-terminally processed;DNA replication complex GINS protein SLD5 yes no 0 0 1 3 0 1 49.933 50.008 3 2.2231000000000004E-25 14137 20230619_1882_Aki_TMTPro18x_K_F3 216.16 197.63 45743 37416 45171 49169 44361 54784 45408 44274 45522 54068 56116 48706 57545 52735 45964 61453 55264 58520 42292 34351 45948 48745 46210 54713 45754 46227 46836 53960 57078 49867 58161 54713 47545 61407 52809 55601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121300000 27560 4422 25888 51759 41760 41760 1 9606 Homo sapiens 0.02431953742097903 TRPEPTEVLHACK Unmodified 1536.7719 0.77186132 4288 Q8WXH0-2;Q8WXH0;D4YW74;G3V5X4;A0A0C4DGK3;Q8WXH0-7;A0A669KBH2;A0A669KB22 SYNE2;TROPH Nesprin-2 yes no 0 0 1 7 0 1 37.977 38.041 4 0.00023707 8498 20230619_1887_Aki_TMTPro18x_K_F7 101.89 76.226 44914 37748 45096 44925 43992 48987 53058 47404 56888 56613 63760 60238 56596 49284 54720 62352 73270 61919 41539 34617 45783 44846 46021 49198 53087 48800 57995 56830 64759 60635 57927 51882 56738 62403 69847 58858 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54495000 27561 4288 25889 51760 41761 41761 1 9606 Homo sapiens 0.024946268690655415 TRPSSTVIK Unmodified 987.57129 0.57129425 4054 Q5SSJ5;Q5SSJ5-2;Q5SSJ5-3;B4E0N8 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 1 3 0.816 1 1 1 34.183 34.239 3 0.014264 7267 20230619_1882_Aki_TMTPro18x_K_F3 69.349 7.0867 232410 147310 208980 220980 318200 352310 291540 307810 442420 59488 61791 53053 51023 48222 130710 45702 89772 47716 214420 135590 215990 218710 321510 345050 299780 310760 425740 74016 80918 54215 56419 49758 128760 46364 85998 45454 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 252220000 27562 4054 25890 51761;51762;51763 41762 41762 1 9606 Homo sapiens 0.07701145334556259 TRPTTLGSSQFSGSGIDER Unmodified 1994.9657 0.96574634 357 B4DZH5;A0A024R5T1;A0A024R5Z0;Q99081;Q99081-3;H0YNQ5 TCF12 Transcription factor 12 yes no 0 0 1 6.5 0.5 1 1 40.9 40.979 3 2.1767E-31 9662 20230619_1887_Aki_TMTPro18x_K_F7 235.54 213.33 86491 61400 72631 74725 64318 71553 72999 71440 82357 90642 97197 88883 98764 87680 86252 102420 100260 97683 79804 56357 74813 74346 67748 72606 73428 73521 83995 90521 99028 90317 100180 91245 88789 102380 95776 92840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 210160000 27563 357 25891 51764;51765 41763;41764 41764 2 9606 Homo sapiens 0.00806210048176581 TRPVVAAGAVGLAQR Unmodified 1464.8525 0.85249491 1063 P11310-2;P11310;Q5HYG7;Q5T4U5;A0A0S2Z366;B4DWX6;B7Z9I1;A0A7P0TB51;A0A7P0T8G6;B4DJE7;A0A7P0TB55;B4DVB1;B4DVE0;A0A0S2Z3A5;H0YDT5 ACADM;DKFZp686M24262 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 1 6.5 1.12 1 1 1 1 40.075 40.134 3 2.0731E-10 9565 20230619_1886_Aki_TMTPro18x_K_F6 151.03 107.94 231220 185300 240050 282350 311590 364170 308780 317840 352870 320190 359570 404500 395080 360410 335670 359300 408010 418480 213840 170420 244500 278020 318070 360780 312850 327940 357220 326140 370430 405170 399490 373090 346490 364370 389760 396810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 609890000 27564 1063 25892 51766;51767;51768;51769 41765;41766 41766 2 9606 Homo sapiens 0.1386627597428287 TRQELEK Unmodified 902.48214 0.48214489 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 1 4.5 0.5 1 1 32.609 32.679 3 0.058282 6626 20230619_1883_Aki_TMTPro18x_K_F4 63.419 9.644 46068 20235 66828 61223 104340 87516 73126 97955 60114 45907 86325 102340 57518 68492 91679 34306 93717 77659 42634 18896 66651 58751 104260 86702 75246 97880 62936 50840 86257 100100 61361 69883 92406 37656 89537 73361 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24125000 27565 3549 25893 51770;51771 41767 41767 1 9606 Homo sapiens 0.027003103750416813 TRQEPTSESSMEDSPTTER Oxidation (M) 2182.9284 0.92843414 3229 Q2M1V9;O14981 BTAF1 TATA-binding protein-associated factor 172 yes no 0 1 1 1 0 1 28.419 28.419 3 0.0025512 5358 20230619_1880_Aki_TMTPro18x_K_F1 70.802 65.593 3675.9 3090.5 2275.9 2949.4 5801.3 3963.7 4342.3 4303.2 3686.7 4435 4905.1 4765.8 3733 3115 4612.6 5205.2 4560.5 4244.1 3388.9 2828.7 2482.9 3005.2 5689.5 3947.3 4440.7 4374.4 3846.1 4480.9 4925.3 4769.6 3888.1 3376.3 4675.6 5141.5 4361.8 4042.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19913000 27566 3229 25894 51772 41768 41768 1905 1 9606 Homo sapiens -0.11571294070381555 TRQEPTSESSMEDSPTTER Unmodified 2166.9335 0.93351952 3229 Q2M1V9;O14981 BTAF1 TATA-binding protein-associated factor 172 yes no 0 0 1 1 0 1 32.014 32.014 3 2.2075E-14 6777 20230619_1880_Aki_TMTPro18x_K_F1 150.98 147.89 7820.9 5682.1 7123.9 5493.7 5083.9 7117.4 9528.6 9721.8 9451.6 7774.6 8410.7 7453.6 9199.8 9857.4 7940.1 9300.3 9445.4 8861.5 7221.3 5204.4 7258.8 5596.6 5571.4 7131.1 9346.6 9693.3 9581.9 7954.9 8707.2 7672 9320.2 10050 8186.4 9328.5 9018.7 8423.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17364000 27567 3229 25894 51773 41769 41769 1 9606 Homo sapiens -0.10326990207749986 TRSDIVSR Unmodified 932.50394 0.50394297 1478 A0A384NPU5;Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 PDIA6 Protein disulfide-isomerase A6 yes no 0 0 1 5.5 0.5 1 1 27.388 27.441 3 0.0045245 4894 20230619_1886_Aki_TMTPro18x_K_F6 96.331 46.913 46979 29031 63040 53334 91177 72147 64667 81172 64933 47297 80321 73845 62539 52700 76989 32308 83847 64814 43497 26798 63024 52110 91487 71754 66825 81333 66662 50402 80893 73044 65067 54013 78149 34768 80026 61286 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 90240000 27568 1478 25895 51774;51775 41770;41771 41771 2 9606 Homo sapiens 0.03499115123622687 TRTDSTSDGRPAWMR Oxidation (M) 1751.8009 0.80092962 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;Q6P2H7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 2 7.5 0.5 1 1 29.571 29.635 4 0.016972 5532 20230619_1888_Aki_TMTPro18x_K_F8 61.732 50.47 6558.6 6649 7790.5 6729.9 9434 8185.9 7940.9 8982.8 8346.7 9076.7 9875 8875.6 9447.1 8436.1 8932.3 10552 13178 11388 6083 6084.9 7826.2 6817.1 9607.3 8194.8 8112.7 9118 8547.2 9158.8 10035 9012.3 9638.5 8829 9334.3 10611 12555 10814 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16123000 27569 3881 25896 51776;51777 41772 41772 2561 1 9606 Homo sapiens -0.044898805726006685 TRTEELIVQTK Unmodified 1316.73 0.72997974 2141 A8K9T8;Q9BYT8;B3KU23;Q9BQD0 NLN Neurolysin, mitochondrial yes no 0 0 1 6.5 0.5 1 1 43.142 43.229 3 1.3844E-06 10581 20230619_1887_Aki_TMTPro18x_K_F7 161.87 90.253 191170 158240 189180 202050 227500 246990 235700 220080 249950 271150 279920 290760 288570 242460 261470 313630 313040 313520 176770 145220 193010 201000 233440 245730 237600 228080 255180 271860 286250 292650 292970 255460 269490 313860 299020 297780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 436310000 27570 2141 25897 51778;51779 41773 41773 1 9606 Homo sapiens 0.08428394452153043 TRTEYQPEQK Unmodified 1278.6204 0.62042929 2534 E5RHS6;B4DLX1;E5RGE8;Q7Z4X6;Q6IAL2;Q9Y328;G3XAM5;E5RH73 HMP19;NSG2 Neuron-specific protein family member 2 yes no 0 0 1 4 0 1 32.83 32.887 3 0.00078637 6663 20230619_1883_Aki_TMTPro18x_K_F4 97.734 62.32 50011 22212 60504 47434 25247 30424 46382 54228 62319 62146 100220 128830 75962 81056 109060 41634 118390 130970 46192 20593 59977 45629 29597 32554 46132 53994 63974 64342 100230 125910 79971 83116 110450 47687 113270 123400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 18876000 27571 2534 25898 51780 41774;41775 41774 2 9606 Homo sapiens -0.00773611167164745 TSAALSTVGSAISR Unmodified 1319.7045 0.70449327 861 Q6FGS1;Q53GA0;A0A087WYR3;O43399;O43399-5;O43399-7;Q68E05;O43399-2;O43399-4;O43399-3;B4DDV4;O43399-6 TPD52L2;DKFZp686A1765 Tumor protein D54 yes no 0 0 0 2.5 0.5 1 1 48.78 48.851 2 3.48E-08 13629 20230619_1882_Aki_TMTPro18x_K_F3 135.73 87.877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27572 861 25899 51781;51782 41776;41777 41777 2 9606 Homo sapiens 0.05742919929753043 TSACGLFSVCYPR Unmodified 1516.6803 0.68026913 1860;2118 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;A8K8B0;P30154;P30154-2;P30154-4;P30154-3 PPP2R1A;PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform no no 0 0 0 3.5 0.5 1 1 55.329 55.356 2 1.0791E-20 16335 20230619_1883_Aki_TMTPro18x_K_F4 219.89 190.14 124800 115700 115310 114300 108210 124100 124820 127190 138470 108260 95818 86091 104670 86559 103530 119100 114940 95407 115420 105900 117810 115780 113470 124870 125320 129200 138540 109800 100670 88515 106520 90992 106000 117800 109730 90940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167350000 27573 1860;2118 25900 51783;51784 41778 41778 1 9606 Homo sapiens -0.05740379819781083 TSALENYINR Acetyl (Protein N-term) 1221.599 0.59896556 1929 F2Z2Y6;C9JNV3;A4D0W0;O95777 LSM8 U6 snRNA-associated Sm-like protein LSm8 yes no 1 0 0 3.5 0.5 1 1 57.704 57.722 2 4.4694E-14 17376 20230619_1883_Aki_TMTPro18x_K_F4 168.23 156.33 37408 34406 41611 40292 37959 44865 42307 41811 49941 37730 33709 33631 44325 35204 45132 41095 41301 40221 34650 31537 41861 40279 39854 44948 42643 42818 49784 38258 35831 34394 44926 36591 45642 41169 39546 38215 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136940000 27574 1929 25901 51785;51786 41779;41780 41780 2 9606 Homo sapiens -0.0029699619583425374 TSALTQGLER Acetyl (Protein N-term) 1116.5775 0.57750184 820 A0A087WV46;C9JXA7;Q0VGL1 LAMTOR4 Ragulator complex protein LAMTOR4;Ragulator complex protein LAMTOR4, N-terminally processed yes no 1 0 0 2 0 1 50.221 50.273 2 4.8894E-07 14565 20230619_1881_Aki_TMTPro18x_K_F2 140.35 129.54 61779 37000 54982 62689 57495 67387 68437 74673 75082 107910 129220 126910 134900 114810 100660 137020 153290 190940 56978 34120 56513 61226 59861 67906 68629 76643 78360 107780 130210 127610 135900 120090 106070 140210 146420 180650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150640000 27575 820 25902 51787 41781 41781 1 9606 Homo sapiens 0.023876187754467537 TSAPITCELLNK Unmodified 1345.6912 0.69115139 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 7.5 0.5 1 1 55.012 55.076 3 7.3247E-10 15730 20230619_1888_Aki_TMTPro18x_K_F8 148.28 109.88 256950 236980 248330 284460 238950 260960 286660 266240 290830 301800 264460 306320 334120 278840 272590 364540 315180 344810 237720 217270 253070 283080 250150 265850 286380 272720 295240 303220 275920 309780 335890 293070 281140 363560 301360 327610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 836780000 27576 3881 25903 51788;51789 41782;41783 41783 2 9606 Homo sapiens 0.0321334582615691 TSASIILR Unmodified 859.51272 0.51271674 3470 P17987;E7ERF2;E7EQR6;F5H282;F5GZ03 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 2 0.816 1 1 1 43.979 44.02 2 0.0022657 11869 20230619_1880_Aki_TMTPro18x_K_F1 129.47 47.831 699420 577870 586110 660670 613630 744900 670950 685850 864270 778100 773430 756200 836590 730040 617140 824630 714960 843670 645900 529770 605750 661560 637890 745470 679150 707150 865840 781110 800130 767870 841570 758940 638020 827640 684010 800650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1345800000 27577 3470 25904 51790;51791;51792 41784;41785;41786 41784 3 9606 Homo sapiens 0.07734088760105351 TSATQPWNR Unmodified 1059.5098 0.50975662 3248 Q3B768;O43156 KIAA0406;TTI1 TELO2-interacting protein 1 homolog yes no 0 0 0 8 0 1 37.452 37.438 2 0.029934 8460 20230619_1888_Aki_TMTPro18x_K_F8 82.426 37.114 28960 20799 31210 29079 32146 32098 30499 29779 34093 30829 33400 34767 35048 31586 31338 35637 36557 33252 26775 19118 31511 28726 33241 32179 30970 30617 34501 31230 34383 35011 35559 32885 32242 35606 34904 31620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7548700 27578 3248 25905 51793 41787 41787 1 9606 Homo sapiens -0.017617863647274135 TSATVGPK Unmodified 759.41267 0.41266834 3459 P16104 H2AFX Histone H2AX yes yes 0 0 0 7.5 0.5 1 1 36.184 36.211 2 0.00069982 7774 20230619_1887_Aki_TMTPro18x_K_F7 176.41 126.39 135140 52407 193150 182430 337620 330360 199890 320870 199880 96129 232520 311960 142370 225920 271340 51647 306800 294990 124990 49162 193400 175230 335050 322320 209920 322040 204470 115740 233870 303600 155050 226390 274350 69070 293120 277650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108570000 27579 3459 25906 51794;51795 41788;41789 41788 2 9606 Homo sapiens 0.023338514262945864 TSATWLALSR Unmodified 1104.5928 0.59275797 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 4 0 1 53.392 53.411 2 4.416E-05 15525 20230619_1883_Aki_TMTPro18x_K_F4 147.95 126.48 408650 378220 358440 389220 487190 667720 592260 600490 780840 290750 249670 224020 219300 184350 463770 298400 284790 209370 377790 346280 370760 395930 500090 652130 596160 609430 761970 309370 280170 229550 236540 197420 456470 293600 273690 200080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290360000 27580 3387 25907 51796 41790 41790 1 9606 Homo sapiens 0.04464530363270569 TSAYGPPTR Unmodified 948.46649 0.46649483 638 B4DMD3;B4DY34;A0A024RAW9;Q9Y2W2 WBP11 WW domain-binding protein 11 yes no 0 0 0 7 0.816 1 1 1 34.078 34.12 2 0.0097108 7119 20230619_1888_Aki_TMTPro18x_K_F8 85.676 64.169 23298 16978 21178 23164 27811 32151 27228 31294 36983 27401 34295 35500 36900 31365 28064 32082 41047 39057 21512 15601 21805 22997 28381 31795 27790 31906 36981 28165 35421 35536 37171 32534 29429 32608 39134 37030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70984000 27581 638 25908 51797;51798;51799 41791 41791 1 9606 Homo sapiens -0.009799761420140385 TSCEFTGDILR Unmodified 1297.5973 0.597251 1233 A0A140VK65;P21281;Q59HF3;H0YC04 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 4.5 0.5 1 1 50.762 50.816 2 1.206E-09 14339 20230619_1883_Aki_TMTPro18x_K_F4 193.01 156.63 167990 118960 140280 152210 114260 141780 143900 147530 162850 179100 166400 172430 190670 168710 168110 250180 210200 239040 155000 109250 144490 150850 121750 144260 144030 151180 165100 179090 171670 175360 192860 178430 174130 249190 200910 227050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 358640000 27582 1233 25909 51800;51801 41792 41792 1 9606 Homo sapiens -0.0396437327615331 TSDANETEDHLESLICK Unmodified 1960.8684 0.86840006 133 A0A024R179;Q09161;F2Z2T1 NCBP1 Nuclear cap-binding protein subunit 1 yes no 0 0 0 2.5 0.5 1 1 54.532 54.567 3 2.745E-09 16402 20230619_1881_Aki_TMTPro18x_K_F2 131.18 112.82 156920 123220 141010 149770 124570 161950 138880 151520 140760 160360 151530 158980 181790 152380 154610 187690 174330 175600 144940 113060 144390 149240 131300 162540 139370 155730 143880 161510 156340 161260 183280 159270 158970 187280 166610 166910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 496680000 27583 133 25910 51802;51803 41793;41794 41793 2 9606 Homo sapiens -0.07359939942966776 TSDFNTFLAQEGCTK Unmodified 1717.7618 0.76175015 228 A0A024R394;Q9UHD1;A0A024R3C3;Q9UHD1-2;E9PHZ2 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes no 0 0 0 5.5 0.5 1 1 57.693 57.757 3 2.4438E-05 16960 20230619_1885_Aki_TMTPro18x_K_F5 101.53 90.266 334490 257920 356190 341410 275560 329580 337910 319050 317450 581540 551610 495940 566100 456250 413510 647510 532110 542940 309350 236870 358730 337810 294300 333910 336820 333700 334970 570580 554990 506200 569840 482100 431040 641040 508050 516750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1311700000 27584 228 25911 51804;51805 41795;41796 41795 2 9606 Homo sapiens -0.06842025646869843 TSDIFGSPVTATSR Unmodified 1437.71 0.70997257 1969 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2;H3BMV3;H3BMT0;H3BTV5;B4DL85 HN1L Hematological and neurological expressed 1-like protein yes no 0 0 0 7.5 0.5 1 1 50.289 50.368 2 2.3091E-11 13732 20230619_1887_Aki_TMTPro18x_K_F7 215.71 184.97 222450 168060 205570 209560 175520 208440 193500 202770 218460 258140 251960 244950 270470 218320 237130 291090 255040 255440 205470 154250 209790 208240 185360 210720 195000 209020 222700 257440 257680 248430 273770 229940 243010 289210 243850 243000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 340840000 27585 1969 25912 51806;51807 41797;41798 41797 2 9606 Homo sapiens 0.008625987215737041 TSDLIVLGLPWK Unmodified 1340.7704 0.77038799 291 Q13148;A0A0A0N0L3;A0A024R4E2;A0A0A0N0N3;A0A087WYY0;A0A087X260;G3V162;B1AKP7;K7EN94;A0A0A0N0M3;A0A087WX29;K7EJM5;B4DRW3;A0A087WV68;A0A087WXQ5 TARDBP;TDP43 TAR DNA-binding protein 43 yes no 0 0 0 2.5 0.5 1 1 64.649 64.669 3 0.0010675 20398 20230619_1882_Aki_TMTPro18x_K_F3 87.667 72.977 306880 235440 319230 293020 269410 320870 350460 320340 352070 337480 348150 345070 368900 336030 366370 378690 330480 368670 283740 216090 322410 291670 286020 322280 348740 327830 358390 340430 358380 349740 375810 349070 370710 379320 316810 350130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 569080000 27586 291 25913 51808;51809 41799 41799 1 9606 Homo sapiens 0.11363360842597103 TSDQIHFFFAK Unmodified 1339.6561 0.65608651 2788;555 A0A3Q8Q4D0;A0A3S8NFS6;A0A0K0Q2Z1;A0A024R944;A0A2S0BDD1;P01008;Q8TCE1;CON__P41361 SERPINC1 Antithrombin-III no no 0 0 0 2 0 1 56.909 56.925 3 0.00077813 17367 20230619_1881_Aki_TMTPro18x_K_F2 103.75 89.19 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27587 555;2788 25914 51810 41800 41800 1 9606 Homo sapiens -0.00015528919470852998 TSDQTWVK Unmodified 963.46616 0.46616048 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5.5 0.5 1 1 44.558 44.642 2 3.9036E-05 11515 20230619_1886_Aki_TMTPro18x_K_F6 189 98.692 178790 129680 173570 183420 214240 219550 212540 211340 268670 220620 241970 240740 251450 211620 235140 210810 286520 228480 165170 119210 177420 181240 219220 219070 216090 216700 269330 223190 249920 242440 255600 219240 242060 212970 273240 217040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159440000 27588 3881 25915 51811;51812 41801;41802 41802 2 9606 Homo sapiens -0.017033958618526412 TSDSTPDPQRVPLR Unmodified 1567.7954 0.79543354 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPW9;H7C3P6;A0A8V8TQG1 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 1 5 0 1 36.507 36.598 3 7.0399E-05 8131 20230619_1885_Aki_TMTPro18x_K_F5 79.466 61.657 24161 24263 24314 25883 34187 33422 29037 33059 33598 25027 31637 28550 34289 27376 30353 28816 31803 27136 22374 22215 24838 26116 34560 33233 29725 33566 33868 25844 32646 28811 34711 28357 31003 28852 30382 25809 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43121000 27589 1852 25916 51813 41803 41803 1 9606 Homo sapiens 0.03424763907196393 TSDVGGYYYEK Unmodified 1280.5561 0.55609769 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 4.8 0.748 2 2 1 47.685 47.747 2;3 9.2072E-06 12774 20230619_1885_Aki_TMTPro18x_K_F5 172.27 141.05 388560 263380 335550 404620 349900 398110 394200 387200 462970 502570 602810 616830 592410 534600 511700 635990 630060 627220 358500 242420 345930 396680 363800 402650 397120 399560 473330 505150 611440 618330 601360 559270 528980 636660 601680 595840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1331300000 27590 630 25917 51814;51815;51816;51817;51818 41804;41805 41805 2 9606 Homo sapiens -0.0729581104396857 TSDVNETQPPQSE Unmodified 1430.6161 0.61613177 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 0 1 0 1 37.913 37.913 2 7.5477E-08 9164 20230619_1880_Aki_TMTPro18x_K_F1 145.25 134.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27591 3549 25918 51819 41806 41806 1 9606 Homo sapiens -0.08195165171355256 TSEDHFQPFFNEK Unmodified 1624.7158 0.71578623 2771 CON__P00735 yes yes 0 0 0 5 0 1 50.923 50.999 3 0.0038052 14181 20230619_1885_Aki_TMTPro18x_K_F5 78.763 65.626 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27592 2771 25919 51820 41807 41807 1 9606 Homo sapiens -0.07158302766788438 TSEFFAAQLR Acetyl (Protein N-term) 1210.5982 0.59823728 135 A0A494C112;A0A494C1E1;A0A494C0N1;A0A024R1B6;B5MC36;Q6ISU8;P19440-3;B5MC34;A0A494C1J8;Q14390;B5MD39 hCG_2042868;GGT1;GGTLC2;GGTLC3 Gamma-glutamyltransferase light chain 2;Putative gamma-glutamyltransferase light chain 3 yes no 1 0 0 1 0 1 29.343 29.343 3 0.0028362 5723 20230619_1880_Aki_TMTPro18x_K_F1 47.603 34.972 3457.5 5174.6 5787.3 4204.3 4710.1 6841.9 7069 4091.4 7261.9 4650.2 6388.8 6575.3 5136.6 4043.2 4961.9 5290.1 6074.6 5972.2 3231.4 4723.2 5663.8 4366.1 5045.5 6656.2 6989.3 4393.6 7337 4735.8 6542.6 6501.3 5273.1 4320.7 5111.9 5333.1 5800.7 5665.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63140000 27593 135 25920 51821 41808 41808 1 9606 Homo sapiens 0.0013620915508454345 TSEFTAAFVGR Unmodified 1184.5826 0.58258722 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 4.5 3.5 1 1 53.545 53.58 2 7.697E-06 15834 20230619_1880_Aki_TMTPro18x_K_F1 157.99 112 326520 239600 285670 330570 266360 303860 314020 307870 333200 384790 401950 414490 433570 382700 367270 433610 423270 460180 301420 220190 293580 325920 279640 309320 314570 316420 341340 385570 410600 418330 438440 398480 378100 436230 404700 436670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 331430000 27594 4386 25921 51822;51823 41809;41810 41809 2 9606 Homo sapiens -0.002320773619658212 TSEIYVHR Unmodified 1003.5087 0.50869399 3008 G3V529;Q9GZR7;B4DM03;B4DKV2;Q9GZR7-2;A0A1W2PRR2;F5GYL3;B4E300;Q7Z4W0;A0A087WXU8;Q7Z4X3;B4DGI6 DDX24 ATP-dependent RNA helicase DDX24 yes no 0 0 0 4.5 0.5 1 1 33.622 33.691 3 6.834E-05 7011 20230619_1883_Aki_TMTPro18x_K_F4 152.59 100.6 37980 29284 43015 38883 53063 51886 44720 52176 60333 40464 54032 47357 50927 50298 47961 48054 59515 47195 35145 26894 43391 38659 54059 51492 46079 52935 60253 41777 55546 47914 51996 51629 49454 48292 56747 44880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126820000 27595 3008 25922 51824;51825 41811 41811 1 9606 Homo sapiens 0.007079992663761914 TSESLCQNNMVILK Oxidation (M) 1651.7909 0.79094179 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V4A3;A0A7I2YQX3;C9JKM9 XPO1 Exportin-1 yes no 0 1 0 7 0 1 49.197 49.282 3 0.0051464 13253 20230619_1887_Aki_TMTPro18x_K_F7 61.167 42.755 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27596 3228 25923 51826 41812 41812 1902 1 9606 Homo sapiens -0.00888204622219746 TSESTGSLPSPFLR Unmodified 1477.7413 0.7412727 2312 B2RD51;O95456;O95456-2 PSMG1 Proteasome assembly chaperone 1 yes no 0 0 0 7.5 0.5 1 1 52.747 52.819 2 1.0792999999999998E-21 14748 20230619_1888_Aki_TMTPro18x_K_F8 277.96 224.63 68184 54130 68587 71898 62222 72487 69336 65980 77641 77909 80519 75034 85611 78213 73290 95953 84692 85502 63039 49707 69564 71146 65358 73093 69777 68198 78758 78035 82656 76469 86674 81476 75500 95491 80928 81318 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153870000 27597 2312 25924 51827;51828 41813 41813 1 9606 Homo sapiens 0.021511717556450094 TSEVLRK Unmodified 831.48142 0.48141661 3189 M0QXU7;Q9UPE4;Q53G69;O43615;M0R301 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 yes no 0 0 1 8 0 1 36.555 36.541 3 0.083639 8088 20230619_1888_Aki_TMTPro18x_K_F8 40.268 12.162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27598 3189 25925 51829 41814 41814 1 9606 Homo sapiens 0.05893515725983889 TSEVNCYR Unmodified 1027.4393 0.4392938 1099 A0A0S2Z4Q3;A0A0S2Z4K2;P62633-2;P62633-8;P62633-5;P62633;P62633-4;P62633-6;P62633-7;P62633-3;Q6T598 CNBP Cellular nucleic acid-binding protein yes no 0 0 0 3.5 0.5 1 1 33.355 33.414 2 0.00012857 6936 20230619_1882_Aki_TMTPro18x_K_F3 176.41 154.26 140470 62165 166430 172950 175260 226900 144700 213340 210910 153850 264840 339500 269580 255350 206330 113410 348180 315530 129710 57936 167090 166030 180860 224670 150010 217170 212930 164350 269780 332890 272250 258710 218180 127910 331540 297670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 182810000 27599 1099 25926 51830;51831 41815;41816 41815 2 9606 Homo sapiens -0.07332827744698989 TSEVPYAGINIGPVHK Unmodified 1680.8835 0.88352026 817 Q8N5A0;A0A087WUT6;O60841;D3DVI5;B3KM86 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 0 4.5 3.5 1 1 52.831 52.868 3 8.7735E-34 15527 20230619_1880_Aki_TMTPro18x_K_F1 196.67 177.1 200690 154540 195190 214370 173460 225750 199700 211140 238560 296730 268320 274970 324600 244810 228390 340910 308560 324180 185460 142000 198560 211660 182930 226960 201150 218950 242390 294550 276290 279120 324780 258760 238990 339730 294560 308030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 556960000 27600 817 25927 51832;51833 41817;41818 41817 2 9606 Homo sapiens 0.07031384497827275 TSEYKPPSSPSQR Unmodified 1462.7052 0.70522155 1040 B7WPD9;A0A0G2JR66;Q2KJY2-2;Q2KJY2 KIF26B Kinesin-like protein;Kinesin-like protein KIF26B yes no 0 0 1 7.5 0.5 1 1 35.043 35.077 3 0.00013994 7517 20230619_1888_Aki_TMTPro18x_K_F8 100.69 87.925 39466 19556 27958 32660 31125 23937 37915 28774 39273 41033 66183 82319 61842 73041 92138 53187 95288 96592 36316 18050 29424 31777 32201 24996 37869 29456 40958 42069 66627 81307 64831 74543 93110 56326 91150 91279 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29614000 27601 1040 25928 51834;51835 41819;41820 41820 2 9606 Homo sapiens -0.007622854211831509 TSFDKPDQMAALFK Unmodified 1597.781 0.78102903 4706 Q9Y2A7;Q9Y2A7-2;A0A994J4I5;A0A994J6K9;B3KMK7;B3KM75 NCKAP1 Nck-associated protein 1 yes no 0 0 1 2 0 1 59.908 59.92 3 4.0395E-05 18584 20230619_1881_Aki_TMTPro18x_K_F2 108.71 84.913 105240 81204 92401 90328 74362 102840 100700 103180 111010 113340 112380 112610 129940 102060 127410 130370 119320 127260 97176 74446 94677 90687 79574 103020 100360 105630 112590 113970 116040 114030 131870 107160 129180 130370 114300 120880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98769000 27602 4706 25929 51836 41821 41821 1 9606 Homo sapiens 0.006049754347259295 TSFFQALGITTK Unmodified 1312.7027 0.70270235 691 P05388;A8K4Z4;A0A024RBS2;F8VU65;P05388-2;Q53HW2;F8VWS0;Q6NSF2;F8VPE8;G3V210;F8VW21;Q8NHW5;B4E3D5 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like yes no 0 0 0 5.5 0.5 1 1 63.354 63.401 3 1.8554E-05 19685 20230619_1886_Aki_TMTPro18x_K_F6 125.82 109.56 365980 340960 330350 372660 348860 350960 423740 365670 487940 448540 442730 385090 382690 358930 351650 495870 441350 478040 338440 312320 339090 373590 362750 357140 424670 374960 491510 447070 453310 393240 391370 378260 363920 494630 421670 454100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8062899999.999999 27603 691 25930 51837;51838 41822 41822 1 9606 Homo sapiens 0.05885910911774772 TSFLDDAFRK Unmodified 1198.5982 0.59823728 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 1 0 1 54.221 54.221 3 1.4594E-05 16070 20230619_1880_Aki_TMTPro18x_K_F1 147.74 117.19 245770 215260 228660 234390 210380 217190 251370 245920 260580 287880 292910 265910 302330 248110 298020 334120 282140 288650 227220 197210 233450 235070 220950 221740 251440 250400 266370 287940 299290 270550 307950 261060 302460 331740 270150 274620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186140000 27604 3881 25931 51839 41823 41823 1 9606 Homo sapiens 0.0068820915507785685 TSFNYAMK Unmodified 960.4375 0.43750288 2531 B4DLR8;Q53G81;P15559-3;P15559-2;P15559;Q3B792;H3BRK3 NQO1 NAD(P)H dehydrogenase [quinone] 1 yes no 0 0 0 2 0 1 48.771 48.836 2 0.0094665 13921 20230619_1881_Aki_TMTPro18x_K_F2 101.64 56.013 59090 52100 57908 52441 102680 148450 122030 105280 170410 40936 28953 34792 24715 28576 60837 29431 33226 29635 54657 47699 59664 54184 103980 141710 123140 108750 164800 44942 36290 35393 27181 29699 59529 29681 32033 28158 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101120000 27605 2531 25932 51840 41824 41824 1 9606 Homo sapiens -0.04429836762653849 TSFQMAGEWLK Oxidation (M) 1312.6122 0.61217279 2082 A8K5Y7;Q9HAV4;B3KPQ5;Q9H8N6 XPO5 Exportin-5 yes no 0 1 0 8 0 1 57.271 57.323 3 0.002883 16749 20230619_1888_Aki_TMTPro18x_K_F8 72.089 38.68 30607 24409 28777 28342 29860 27545 29002 30491 34486 34047 28575 27727 34617 27316 32607 36047 30480 32949 28283 22384 29388 28305 30876 28004 29472 31034 34616 34026 29860 28428 35028 28665 33095 35900 29201 31319 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28414000 27606 2082 25933 51841 41825 41825 1304 1 9606 Homo sapiens -0.031628814081386736 TSFTPVGDVFELNFMNVK Unmodified 2043.9976 0.99756374 1878 B2RE46;A0A994J5J1;P04844-2;P04844;B4DJL0 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 0 0 2 0 1 65.404 65.411 3 8.9023E-10 21000 20230619_1881_Aki_TMTPro18x_K_F2 136.81 124.9 11525 8999.5 8668.6 9538.3 9382.4 8923.3 11664 11470 10356 12264 13778 14693 16537 15488 14611 15871 15513 17839 10632 8246.7 9058.9 9587.9 9740.2 9136.3 11589 11564 10769 12421 14105 14836 16706 15966 14949 16051 14850 16915 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185330000 27607 1878 25934 51842 41826 41826 1 9606 Homo sapiens 0.01732486477749262 TSFVNFTDICK Unmodified 1330.6227 0.62273747 2657 Q6IBR8;B5BU01;P20042;Q96I16 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 1.5 0.5 1 1 60.304 60.31 2 1.3528E-08 18747 20230619_1881_Aki_TMTPro18x_K_F2 179.67 156.93 30975 23619 21238 29590 18082 26817 24606 24712 29735 31308 24668 31188 38207 32670 25469 46817 38123 44439 28555 21679 22395 29342 19295 27264 24588 25579 29834 31291 26174 31725 37980 34398 26942 46615 36397 42210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65453000 27608 2657 25935 51843;51844 41827 41827 1 9606 Homo sapiens -0.029348987536877758 TSGGLLSEAPNEK Unmodified 1301.6463 0.64630969 2551 B4DVK1;B4E013;B4DND9;Q7L4X7;Q96CS0;Q53YP0;B4E1N4;Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein yes no 0 0 0 4 0 1 47.043 47.086 3 0.00097849 12659 20230619_1883_Aki_TMTPro18x_K_F4 85.672 63.799 113960 93089 116840 109020 109580 104300 126640 108650 130610 120020 154660 126510 144510 120910 126710 149970 156440 148930 105400 85364 118280 108790 114690 106000 126830 111070 133690 120920 156890 128120 146970 126460 130930 150110 149340 141490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113800000 27609 2551 25936 51845 41828 41828 1 9606 Homo sapiens 0.007552382845005923 TSGLCVPLTWR Unmodified 1288.6598 0.65979168 4561 Q9NPF0;M0R100 CD320 CD320 antigen yes no 0 0 0 4 0 1 58.243 58.246 2 0.02589 17592 20230619_1883_Aki_TMTPro18x_K_F4 82.261 62.097 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27610 4561 25937 51846 41829 41829 1 9606 Homo sapiens 0.02700817582694981 TSGSVYITLK Unmodified 1067.5863 0.58627561 3560 P37108;H0YLA2 SRP14 Signal recognition particle 14 kDa protein yes no 0 0 0 2.5 0.5 1 1 52.363 52.415 2 1.4699E-06 15206 20230619_1882_Aki_TMTPro18x_K_F3 195.79 127.36 294130 250120 254530 297440 303770 370820 343480 324170 397600 201710 211070 178590 199730 174120 269630 194320 223910 184910 271730 229360 262950 297400 313120 368220 345440 331170 393890 210150 224810 182430 207610 180830 269980 194690 214400 175870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 346040000 27611 3560 25938 51847;51848 41830;41831 41831 2 9606 Homo sapiens 0.05518592411908685 TSGTEPADFALPSSR Unmodified 1534.7264 0.72635092 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B7Z3E7;M0R142 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 4 0 1 48.595 48.633 2 1.8859000000000002E-41 13373 20230619_1883_Aki_TMTPro18x_K_F4 269.04 214.78 48373 43953 44180 56281 46366 52073 65331 59392 72955 64734 56892 64120 72938 58978 59086 69058 68541 72454 44728 40326 45352 55760 48508 53140 64961 60336 73252 65130 59876 64920 73268 61566 60902 69397 65515 68767 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49029000 27612 1984 25939 51849 41832 41832 1 9606 Homo sapiens -0.01962320112352245 TSGVPGNRPGSVIR Unmodified 1395.7583 0.75826017 3273 O60271;O60271-4;O60271-2;O60271-9;B4DS36;Q5JB53;Q719J0;Q7Z5Q8 SPAG9;HLC4 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 1 3.5 0.5 1 1 33.797 33.856 3 4.0597E-07 7056 20230619_1883_Aki_TMTPro18x_K_F4 139.77 93.799 91738 74306 87033 84114 83610 88979 93915 94743 107070 85229 91983 79829 87362 64084 94541 91133 96019 79972 84787 68120 88728 84256 87387 89765 94517 96131 107650 86499 94826 80829 89590 68090 96066 90536 91744 76135 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 125170000 27613 3273 25940 51850;51851 41833;41834 41834 2 9606 Homo sapiens 0.07621137152113988 TSGVVTSCTGVLPQLSMVK Oxidation (M) 1979.0067 0.0067482219 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 1 0 3 0 1 58.148 58.178 3 7.2936E-11 17670 20230619_1882_Aki_TMTPro18x_K_F3 139.88 114.33 62258 58584 61734 64114 55034 55761 63702 53963 53833 76736 67946 60223 70085 58231 65078 80769 62656 65498 57618 53662 62660 64212 57850 57029 63443 55904 56082 75790 69104 61848 71200 61325 66221 79904 59992 62362 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141010000 27614 2702 25941 51852 41835 41835 1624 1 9606 Homo sapiens 0.05640511771775891 TSHGEVISVPHK Unmodified 1289.6728 0.67279921 3854 Q13505-3;Q13505;Q13505-2 MTX1 Metaxin-1 yes no 0 0 0 7 0 1 37.359 37.424 4 4.2362E-05 8235 20230619_1887_Aki_TMTPro18x_K_F7 120.57 106.15 84042 18716 68760 78138 115810 81724 91760 98271 105780 90597 118480 110110 108760 92732 82609 97040 95182 103600 77241 17756 71824 73962 115610 82738 94351 99024 107430 92560 120440 110350 110050 96449 85241 97786 91006 98295 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96857000 27615 3854 25942 51853 41836 41836 1 9606 Homo sapiens 0.03954971966481935 TSIAIDTIINQK Unmodified 1315.7347 0.73473076 3504 V9HW26;P25705;P25705-2;P25705-3;K7EK77;K7ENJ4 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 3.67 3.09 1 1 1 59.521 59.539 3 3.7206E-13 17590 20230619_1888_Aki_TMTPro18x_K_F8 199.7 142.11 154440 136840 142300 159030 139850 157840 179720 175640 195450 184640 183830 182970 210850 172370 192920 211570 191820 207840 142790 125430 145650 158810 146570 160130 179360 178460 197760 186080 190350 185530 213430 180260 196540 211730 183660 197390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 261000000 27616 3504 25943 51854;51855;51856 41837;41838;41839 41839 3 9606 Homo sapiens 0.08949278594946009 TSIDAYDNFDNISLAQR Unmodified 1941.9068 0.90683448 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;J3KS13 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 4.2 0.748 1 2 2 59.36 59.389 2;3 2.7272E-59 18072 20230619_1883_Aki_TMTPro18x_K_F4 293.38 277.2 143330 121400 134420 155320 131940 151580 143360 156170 155440 178870 169190 182910 189630 171810 181300 203010 194250 196520 132500 111410 137380 154000 137620 153650 144340 159820 158390 179620 173960 185100 192570 179180 185340 203100 185750 186720 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1162400000 27617 826 25944 51857;51858;51859;51860;51861 41840;41841;41842 41840 3 9606 Homo sapiens -0.026442662461477084 TSIEDQDELSSLLQVPLVAGTVNR Unmodified 2583.3392 0.33917563 3667 P56537;P56537-2;A0A0U1RQV5 EIF6 Eukaryotic translation initiation factor 6 yes no 0 0 0 5.67 0.471 1 2 65.043 65.087 3;4 6.339700000000001E-45 20357 20230619_1886_Aki_TMTPro18x_K_F6 240.2 226.3 33928 33801 34382 30857 36546 37533 37924 40455 38022 37204 42909 42723 39274 39728 38004 50353 42878 43397 31418 30909 34897 31536 37794 37545 38181 41025 38918 37935 43638 43054 40185 41594 39008 50007 40982 41290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 402850000 27618 3667 25945 51862;51863;51864 41843;41844 41843 2 9606 Homo sapiens 0.11083961190843183 TSIFWNDVKDPVSIEER Unmodified 2034.0058 0.0058202445 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q86UM1;C9JZG1;C9JQN7 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 1 6 0.816 1 1 1 60.485 60.536 3 5.1184E-14 18107 20230619_1885_Aki_TMTPro18x_K_F5 166.52 145.32 253360 219260 240070 245270 218490 260740 265070 270440 264930 331130 300610 274550 312080 256040 313780 296300 262210 245940 234260 200930 244710 245880 230030 262740 264680 277150 271690 329530 307160 280640 318040 266870 316100 294410 251260 234190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 576040000 27619 487 25946 51865;51866;51867 41845;41846 41845 2 9606 Homo sapiens 0.030177567187593013 TSIIEAQYLR Unmodified 1192.6452 0.64518747 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 0 7.5 0.5 1 1 52.072 52.147 2 1.1982E-06 14427 20230619_1888_Aki_TMTPro18x_K_F8 176.78 149.53 194860 164230 179730 189470 191300 218810 220420 214780 237100 215380 203430 187750 209310 176680 222550 224820 206110 205150 180100 150560 184090 189700 198650 218950 221040 219690 239260 216840 210530 191580 214050 185180 225170 224060 197350 195070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 323500000 27620 1532 25947 51868;51869 41847;41848 41848 2 9606 Homo sapiens 0.05657068706227619 TSILAAANPISGHYDR Unmodified 1684.8533 0.85328277 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 1 0 1 50.215 50.215 3 3.6457E-11 14462 20230619_1880_Aki_TMTPro18x_K_F1 156 142.1 42708 30029 44688 51555 56846 50318 51384 39114 46751 47487 51732 59105 55188 44625 51058 43150 61703 72800 39471 27677 45438 50228 57811 50730 51967 41026 48117 47899 53054 58926 56009 46487 52535 45064 59011 68790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 294580000 27621 3892 25948 51870 41849 41849 1 9606 Homo sapiens 0.0382502583263431 TSILVFK Unmodified 806.49019 0.49019038 4420 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 yes yes 0 0 0 3.5 0.5 1 1 57.706 57.724 2 0.035158 17519 20230619_1882_Aki_TMTPro18x_K_F3 92.925 37.42 38723 35686 37078 42580 38514 42231 37529 38701 50632 51679 49187 50969 50202 45248 44929 58675 56015 55439 35822 32717 37851 42427 39891 42661 38314 40133 50808 51518 50583 51580 50986 47558 46468 58525 53483 52693 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89280000 27622 4420 25949 51871;51872 41850 41850 1 9606 Homo sapiens 0.07920489362470562 TSISGNWK Unmodified 891.44503 0.4450311 4190 Q92777;Q86VA8;Q92777-2;Q59GM1;B3KSV8;A0A024R2F6;B3KRB3;B4DI62;A0A0A0MR68;Q59EX7;Q17R54;A0A024R1I8;O14994;A0A087WW91;A0A087WTG8 SYN2;SYN3 Synapsin-2;Synapsin-3 yes no 0 0 0 2 0 1 46.329 46.408 2 0.0041158 12796 20230619_1881_Aki_TMTPro18x_K_F2 117.4 69.582 87786 69503 90351 73464 133550 170780 63115 54945 72184 86369 98147 84205 90375 68338 105900 89902 120760 93952 81176 63683 92093 75078 133640 162630 68085 64958 74211 85638 99078 85082 93172 72210 108130 90272 115210 89291 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59851000 27623 4190 25950 51873 41851 41851 1 9606 Homo sapiens -0.005033611707062846 TSIWDETLYK Unmodified 1254.6132 0.61321864 4083 Q5VZM0;Q7L523;Q5VZM2-2;Q5VZM2 RRAGB;RRAGA Ras-related GTP-binding protein A;Ras-related GTP-binding protein B yes no 0 0 0 6 0 1 60.501 60.559 3 0.0025643 18349 20230619_1886_Aki_TMTPro18x_K_F6 90.149 56.282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27624 4083 25951 51874 41852 41852 1 9606 Homo sapiens -0.003903437675717214 TSLAGDTSNSSSPASTGAK Unmodified 1737.8017 0.80170071 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;Q9UPN3-5;A0A804HL78;O94854;H0Y314;Q6IPG6;H0Y6T5;Q96IQ1;Q6ZQZ4;H0Y4F5;Q8WXX9;B4DNC4;Q32Q32;Q9H8U2 MACF1;KIAA0754 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5;Uncharacterized protein KIAA0754 yes no 0 0 0 6 0 1 40.282 40.374 3 2.8295E-07 9698 20230619_1886_Aki_TMTPro18x_K_F6 106.67 94.751 6093.8 4979.9 7261.9 8207 7093.4 8817 10368 9054.8 10950 10070 11052 10768 10944 9261.4 8630.9 9707.4 13310 13850 5643.6 4584.4 7287.5 8025.8 7471.1 8867.4 10276 9264.8 11120 10145 11325 10847 11067 9634.5 9080.8 9975.3 12693 13109 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23387000 27625 1566 25952 51875 41853 41853 1 9606 Homo sapiens -0.03768807442565958 TSLALDESLFR Unmodified 1250.6507 0.65066678 4183 Q86U42-2;Q86U42;Q92843-2;A0A7I2V383;B4DEH8;G3V4T2;H0YJH9 PABPN1 Polyadenylate-binding protein 2 yes no 0 0 0 5.5 0.5 1 1 59.888 59.945 2 7.1068E-12 18122 20230619_1886_Aki_TMTPro18x_K_F6 201.18 152.9 289080 238910 259080 288310 271300 309080 312530 301750 303770 319890 325820 324570 361010 289910 312980 365250 334340 353860 267090 219140 266070 287390 282000 310800 312480 309310 310990 322400 334800 328210 364920 304250 320580 365050 319820 336140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 197830000 27626 4183 25953 51876;51877 41854;41855 41855 2 9606 Homo sapiens 0.03536747498014847 TSLAQQLQR Acetyl (Protein N-term) 1085.5829 0.58292157 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;Q6P664 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 1 0 0 5 0 1 48.341 48.418 2 1.8772E-05 13079 20230619_1885_Aki_TMTPro18x_K_F5 132.09 114.53 41931 32473 34589 31335 38674 42107 36894 43999 58483 42285 43443 33342 47914 42715 44288 45578 41942 38754 38703 29734 35784 31918 39859 41823 37977 44726 57716 42604 45401 34626 48601 43896 44975 45380 40130 36892 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43553000 27627 2332 25954 51878 41856 41856 1 9606 Homo sapiens 0.043553423578941874 TSLATILDGGEENLEK Unmodified 1688.8469 0.84685999 3019 X6RLT1;H0UI80;Q8IXH7-4;Q8IXH7;B4E2K1 NELFCD;TH1L Negative elongation factor C/D yes no 0 0 0 3.5 0.5 1 1 62.141 62.158 3 0.012246 19200 20230619_1883_Aki_TMTPro18x_K_F4 61.503 46.302 67203 60982 61184 70093 62566 61381 64881 64123 63636 84317 80746 83813 86632 74434 70171 81599 81489 87969 62137 55891 62713 69937 64879 62841 65281 65881 65694 84068 82308 84747 87447 77481 72334 82213 77903 83462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50080000 27628 3019 25955 51879;51880 41857 41857 1 9606 Homo sapiens 0.029990430906536858 TSLDWWITDK Unmodified 1263.6136 0.61355299 760 A0A1W2PPX5;A0A1W2PQR6;A0A1W2PQB7;A0A1W2PS43;A0A024RDG6;A0A1W2PRS1;Q14108;A0A1W2PRF6 SCARB2 Lysosome membrane protein 2 yes no 0 0 0 7.33 0.471 2 1 62.848 62.88 2;3 0.00011839 19022 20230619_1888_Aki_TMTPro18x_K_F8 103.01 81.705 166790 154230 189760 187200 158850 187430 202890 231620 209480 249730 222470 256850 252390 228200 236540 273270 251280 304350 154530 141420 190400 186450 168620 190500 202380 233940 213800 251460 229230 259350 255990 238720 241840 275510 240650 288550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 651810000 27629 760 25956 51881;51882;51883 41858;41859 41859 2 9606 Homo sapiens -0.007709240477424828 TSLEDEEVFEQK Unmodified 1452.662 0.66201933 1349 A0A2R8YDK3;B4DZN5;A0A2R8YFQ3;B4DHM1;A0A2R8Y4R7;A0A2R8Y6L6;O75648-5;O75648-2;O75648 TRMU Mitochondrial tRNA-specific 2-thiouridylase 1 yes no 0 0 0 1 0 1 53.026 53.026 3 0.0017895 15614 20230619_1880_Aki_TMTPro18x_K_F1 79.82 67.46 23992 24951 25367 25075 22262 33373 32554 30910 42465 25847 25801 25494 26500 25010 26082 32164 29689 32243 22233 22831 25625 25438 23724 33046 32511 31609 41973 26422 27287 25903 27035 26184 26763 32191 28389 30614 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18439000 27630 1349 25957 51884 41860 41860 1 9606 Homo sapiens -0.04620519989157401 TSLEGYPAGGSLPYSIQTAEK Unmodified 2168.0637 0.063729054 402 H0YJ44;G3V2F4;Q32Q25;E7EPD8;B2RDI0;A0A024R6L5;Q9NUW8-2;Q9NUW8 TDP1 Tyrosyl-DNA phosphodiesterase 1 yes no 0 0 0 7 0 1 58.83 58.88 3 4.68E-05 17346 20230619_1887_Aki_TMTPro18x_K_F7 84.521 67.032 27756 24138 29251 29035 25424 30142 26046 30360 30441 32903 34095 36035 37073 29750 36465 37194 36405 39213 25687 22135 29529 28943 26746 30398 26394 31059 30928 33200 34959 36225 37698 31299 37092 37368 34852 37213 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202890000 27631 402 25958 51885 41861 41861 1 9606 Homo sapiens 0.026419738535423676 TSLGPNGLDK Unmodified 1000.5189 0.51892433 2633 P48643;V9HW37;Q9BU08;B4DZT5;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DX08 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 6.5 0.5 2 2 45.709 45.796 2;3 0.00026555 12034 20230619_1886_Aki_TMTPro18x_K_F6 96.957 72.103 192160 161160 200340 182930 217360 266630 219120 204420 299120 210100 250930 222140 226770 196440 231370 255410 260440 218020 177780 147730 203020 184080 224800 261790 223250 213270 297920 212670 258460 224320 232510 206510 236920 253570 248610 207630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 388630000 27632 2633 25959 51886;51887;51888;51889 41862;41863 41862 2 9606 Homo sapiens 0.018685622009684266 TSLMNQYVNK Oxidation (M) 1212.5809 0.58087266 1257 A0A158RFU6;P51149;A0A6Q8PG52;A0A6Q8PH84;C9J8S3;B4DPH9;C9J592;C9J4V0;C9IZZ0;C9J4S4;C9J7D1 RAB7A Ras-related protein Rab-7a yes no 0 1 0 1 0 1 44.027 44.027 3 0.018668 11896 20230619_1880_Aki_TMTPro18x_K_F1 59.426 44.16 41826 26585 31777 44858 49844 59489 49710 52320 63520 43886 43299 51312 48792 35517 41016 41110 54918 47370 38544 24508 33479 43936 50422 58832 50520 53707 63079 45061 45665 51180 49238 37485 42606 41575 52358 44954 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51619000 27633 1257 25960 51890 41864 41864 801 1 9606 Homo sapiens -0.01691454442243412 TSLMNQYVNK Unmodified 1196.586 0.58595803 1257 A0A158RFU6;P51149;A0A6Q8PG52;A0A6Q8PH84;C9J8S3;B4DPH9;C9J592;C9J4V0;C9IZZ0;C9J4S4;C9J7D1 RAB7A Ras-related protein Rab-7a yes no 0 0 0 2.5 0.5 1 1 50.728 50.79 2 6.1141E-10 14473 20230619_1882_Aki_TMTPro18x_K_F3 213.53 164.97 248230 211610 237470 236410 226930 334220 252880 242380 366400 129430 106840 92161 113700 94351 174100 141980 147010 122360 229510 193930 242060 238000 238160 328220 256780 250960 355750 136320 122170 95541 118820 99797 174290 140910 140750 116520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 203200000 27634 1257 25960 51891;51892 41865;41866 41866 2 9606 Homo sapiens -0.004471505796118436 TSLPWQGLK Unmodified 1028.5655 0.56548059 1563 P48729-2;P48729;U3KPX3;A0A590UJ43;V9HW00;P48729-3;A0A5F9W493;Q6PJ06;B4DER9;Q05DL3;B4E1D9;E7ETM0;D6REM4;B4DFH4;H0Y9X2;U3KQK7 CSNK1A1;HEL-S-77p Casein kinase I isoform alpha yes no 0 0 0 3.5 0.5 1 1 57.362 57.382 3 0.0054161 17229 20230619_1883_Aki_TMTPro18x_K_F4 72.325 36.381 88491 65281 76918 77387 66266 83491 77405 75142 94216 82250 75995 71636 81748 70592 78876 88048 81634 76671 81687 59894 78947 77254 70111 83758 77930 77542 94294 82465 79060 73199 83132 73765 80459 87543 78045 72961 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 58868000 27635 1563 25961 51893;51894 41867;41868 41868 2 9606 Homo sapiens 0.05234046822897653 TSLSFQDPK Unmodified 1021.508 0.50802529 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 7 0 1 48.392 48.479 3 0.0011112 12886 20230619_1887_Aki_TMTPro18x_K_F7 100.57 59.142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27636 2830 25962 51895 41869 41869 1 9606 Homo sapiens -0.0018684017333043812 TSMASLFSFTSPAVK Acetyl (Protein N-term) 1614.7963 0.79634474 4092 Q6I9T1;Q68DB7;Q99717;D6R9D4;D6RIZ9;D6RBB4 MADH5;DKFZp781O1323;SMAD5 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 5 yes no 1 0 0 3 0 1 66.578 66.614 2 0.0013704 21196 20230619_1882_Aki_TMTPro18x_K_F3 57.836 46.346 4005.9 3472.9 5022.3 4559.4 2687 4845.9 4628.1 4612 4860.8 5328 4633 4708.6 7010.9 5210.6 5810.3 5060 4056.8 5542 3713.3 3187.6 4982 4520 3039.4 4867.7 4564.3 4746.8 4934.3 5327.8 4869.4 4823.4 7014.4 5355.9 5828.8 5117.5 3908.8 5253.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6330600 27637 4092 25963 51896 41870 41870 1 9606 Homo sapiens 0.013538422319243182 TSMESLIHHFK Unmodified 1328.6547 0.6547063 1669 O75306;A0A7I2V4X8;B7Z792;O75306-2;Q53HG2;A0A7I2V4G5;A0A7I2YQD8 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 2 0 1 51.167 51.212 4 8.111E-05 14980 20230619_1881_Aki_TMTPro18x_K_F2 129.89 112.16 34305 34097 38530 53792 41582 57958 45024 47856 44482 42796 39203 42613 40571 35477 35180 42660 40639 50583 31796 31350 38944 52697 43115 57999 45191 49461 45153 43517 40556 43015 41121 37224 36215 43171 38899 47923 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130590000 27638 1669 25964 51897 41871 41871 1 9606 Homo sapiens 0.003525137200995232 TSMLSPK Oxidation (M) 778.38949 0.38949006 4389 Q96QK1;Q53FR4 VPS35 Vacuolar protein sorting-associated protein 35 yes no 0 1 0 8 0 1 38.38 38.365 2 0.044701 8829 20230619_1888_Aki_TMTPro18x_K_F8 82.305 44.067 55436 35559 51666 50621 69040 60103 60540 71786 81278 46916 63072 58727 55495 54726 62919 56265 84217 52325 51162 32708 53031 50020 70027 60341 62185 71820 80770 49155 65220 59004 57324 56611 64972 56333 80151 49857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24793000 27639 4389 25965 51898 41872 41872 2758 1 9606 Homo sapiens -0.008569106826939787 TSMNVNEIFMAIAK Unmodified 1567.7738 0.77383516 203 A0A024R2K1;P20339-2;P20339;A0A0A1HAN9 RAB5A Ras-related protein Rab-5A yes no 0 0 0 2.5 0.5 1 1 63.803 63.823 3 4.0087E-05 20094 20230619_1881_Aki_TMTPro18x_K_F2 104.17 0.95395 51659 43140 46919 56980 50262 58623 57307 57571 55890 50515 57313 55924 57080 53453 58224 62027 57388 64343 47737 39605 48174 56409 52151 59113 57336 58713 57053 51602 58735 56482 58348 55652 59165 62315 54965 61063 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59808000 27640 203 25966 51899;51900 41873;41874 41873 2 9606 Homo sapiens 0.012659195626611108 TSMQSVLQEWK Unmodified 1335.6493 0.64928657 4288 Q8WXH0-2;Q8WXH0;D4YW74;G3V5X4;A0A0C4DGK3;Q8WXH0-7;G3V4T3;Q68DP1 SYNE2;TROPH;DKFZp686H1931 Nesprin-2 yes no 0 0 0 1 0 1 61.379 61.379 3 0.044006 19053 20230619_1880_Aki_TMTPro18x_K_F1 47.039 32.477 25895 23808 25494 27650 26542 32742 29342 29424 36339 35971 32115 32517 31924 27685 37139 33179 29377 37647 23960 21822 25965 27676 27599 32643 29637 30457 36470 35902 33157 32989 32831 29019 37227 33515 28240 35680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20790000 27641 4288 25967 51901 41875 41875 1 9606 Homo sapiens -0.005112098623612837 TSMTEEYR Oxidation (M) 1031.423 0.42297503 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 1 0 1.5 0.5 1 1 29.864 29.899 2 0.010992 5944 20230619_1880_Aki_TMTPro18x_K_F1 93.992 59.167 39845 22615 33510 39691 38398 46007 47095 43636 64231 49015 60570 68275 58106 53120 52541 50475 67970 69488 36724 20871 34691 38728 39802 45951 47480 44904 64241 49865 62250 67878 59158 55152 54362 51841 64894 65793 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 52582000 27642 3197 25968 51902;51903 41876;41877 41876 1879 2 9606 Homo sapiens -0.09147953701449296 TSMTEEYR Unmodified 1015.4281 0.42806041 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0R0I5 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 2 0 1 36 36.056 2 0.00041503 8114 20230619_1881_Aki_TMTPro18x_K_F2 164.53 97.493 56041 36307 51988 64235 51656 72561 73606 60322 88478 82000 87800 98649 95478 87978 75369 79859 106370 110280 51721 33489 53255 62610 54415 72379 73347 63103 89236 82259 90501 98944 96321 90686 78725 82078 101500 104400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95026000 27643 3197 25968 51904 41878 41878 1 9606 Homo sapiens -0.07903649838829097 TSMTEEYRVPDGMVGLIIGR Oxidation (M) 2239.0977 0.097688494 3197 M0R0C6;Q92945;A0A384P5V3 KHSRP Far upstream element-binding protein 2 yes no 0 1 1 7 0 1 55.803 55.864 3 0.00010296 16095 20230619_1887_Aki_TMTPro18x_K_F7 84.166 68.574 43189 41100 42910 50649 45031 41710 45553 49160 49661 52063 60273 46508 58515 48331 52529 60895 55273 60608 39974 37688 43678 50252 46557 43056 46058 49788 50788 52283 61166 47607 59474 50476 53722 60949 52895 57550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46513000 27644 3197 25969 51905 41879 41879 1879;1880 1 9606 Homo sapiens 0.027703557492714026 TSNSYLR Unmodified 839.41373 0.41373097 1171 O43747-2;O43747;B3KXW5;A0A140VJE7;Q8IY97;B4DS96;B4DDL1;H3BNR4;H3BUN9;H3BR36;B4DGE1 AP1G1 AP-1 complex subunit gamma-1 yes no 0 0 0 7 0.816 1 1 1 34.055 34.096 2 0.020317 7120 20230619_1888_Aki_TMTPro18x_K_F8 104.75 77.626 105200 57308 105450 104370 148580 166230 125320 146540 170280 56980 75955 65310 60108 56638 109200 52207 85371 62775 97075 52929 107740 102260 150390 162810 129060 148560 166780 62853 81695 65735 64252 58462 108540 53320 81757 59595 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48162000 27645 1171 25970 51906;51907;51908 41880;41881 41881 2 9606 Homo sapiens -0.012399342048183826 TSPDAFVQLALQLAHYK Unmodified 1901.0047 0.0046980325 337 A0A024R5F4;P50416;B2RAQ8;P50416-2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 0 5 0 1 65.13 65.174 3 7.795699999999999E-19 20236 20230619_1885_Aki_TMTPro18x_K_F5 188.06 163.87 40469 31398 39721 39568 42609 46374 61478 56233 64775 42110 36439 39094 41979 34667 40399 46055 36775 46222 37403 28819 40475 39396 44516 46593 60939 56386 64605 43251 38996 39687 42596 36519 40944 46088 35287 43866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24382000 27646 337 25971 51909 41882 41882 1 9606 Homo sapiens 0.09023587140541167 TSPDEDEDDLLPPEQK Unmodified 1826.8058 0.80578303 3458 Q6PJU3;P15923;A0A494C1R3;K7EPS2;K7EKB9;K7ERZ7 TCF3 Transcription factor E2-alpha yes no 0 0 0 1 0 1 51.53 51.53 3 0.00098685 14977 20230619_1880_Aki_TMTPro18x_K_F1 80.534 70.337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27647 3458 25972 51910 41883 41883 1 9606 Homo sapiens -0.07454762739507714 TSPDTLR Unmodified 788.40283 0.40283194 539 J3KP15;Q53FN0;A0A024R8U5;Q01130;B3KUY1;J3QL05;Q8NAK9;Q01130-2;B3KX15;Q6NXQ0;Q8N220;B3KVY2;B3KUF7 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 yes no 0 0 0 3 0.816 1 1 1 32.371 32.438 2 0.0044667 6498 20230619_1883_Aki_TMTPro18x_K_F4 148.07 76.714 273970 144810 337550 354500 464540 522130 353380 463460 447780 299490 470510 526010 423520 413370 423600 192520 516070 483850 253260 134450 339600 342500 469570 513360 366030 472810 451090 318530 480000 519380 434130 418490 434490 214160 492650 456590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 462580000 27648 539 25973 51911;51912;51913 41884;41885;41886 41886 3 9606 Homo sapiens 0.00016663420910845161 TSPDTLRR Unmodified 944.50394 0.50394297 539 J3KP15;Q53FN0;A0A024R8U5;Q01130;B3KUY1;J3QL05;Q8NAK9;Q01130-2;B3KX15;Q6NXQ0;Q8N220;B3KVY2;B3KUF7 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 yes no 0 0 1 6.5 1.12 1 1 1 1 26.937 26.994 3 0.00032728 3739 20230619_1887_Aki_TMTPro18x_K_F7 136.75 82.862 466300 301140 560650 497760 745100 607620 599740 666230 630710 489220 676330 557960 568150 471580 619710 304310 734400 534000 431330 277510 563770 487970 753430 607650 614460 671520 642030 506030 686380 560460 585690 480870 633690 322470 700170 505490 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 400230000 27649 539 25974 51914;51915;51916;51917 41887;41888;41889;41890 41889 4 9606 Homo sapiens 0.02947115123618005 TSPENVQDR Unmodified 1044.4836 0.48360145 3613 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 1 0 1 29.788 29.788 2 0.0021669 5902 20230619_1880_Aki_TMTPro18x_K_F1 108.98 70.844 6110.4 3009.8 8002.2 8632.3 13438 16963 7183.3 11053 8124.8 6525.7 11990 13456 10926 10686 11792 5174.6 13491 13281 5650.5 2805 8056.8 8345.5 13375 16364 7651.3 11566 8371.9 7052.1 12085 13242 11233 10823 12032 5765.5 12890 12530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5118200 27650 3613 25975 51918 41891 41891 1 9606 Homo sapiens -0.036861003268541026 TSPFELYQFFVR Unmodified 1532.7664 0.76636524 3046 H0YHS6;Q9Y2Z4 YARS2 Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, mitochondrial yes no 0 0 0 4.5 0.5 1 1 65.343 65.37 2 6.3258E-07 20312 20230619_1885_Aki_TMTPro18x_K_F5 163.38 138 28347 24139 27906 30469 31921 39072 27246 35033 34943 37325 38100 35069 40714 41085 39205 40835 39221 44613 26215 22148 28460 30357 32760 38750 28012 36098 35315 37539 39039 35926 41438 42152 39905 41251 37564 42314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33660000 27651 3046 25976 51919;51920 41892 41892 1 9606 Homo sapiens 0.021292713488492154 TSPGRPLGTTK Unmodified 1113.6142 0.6142217 4177 Q7Z6I8;Q7Z6I8-2 C5orf24 UPF0461 protein C5orf24 yes no 0 0 1 3 0 1 34.301 34.362 3 0.0022865 7297 20230619_1882_Aki_TMTPro18x_K_F3 84.169 41.451 64826 43843 56927 62478 85675 85438 87809 88155 103850 47826 62748 58469 58038 46641 66565 39407 64874 48886 59818 40319 58957 61851 86733 84698 88838 88772 103040 50908 66104 58496 59785 48138 67283 40348 61976 46390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34684000 27652 4177 25977 51921 41893 41893 1 9606 Homo sapiens 0.061959153919815435 TSPPDSSVIVTLLDQAAK Unmodified 1840.9782 0.97820851 57 A0A024QZQ1;Q96EB6;B3KNK3;I1Y8W7;B0QZ35;E9PC49;A8K128 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment yes no 0 0 0 8 0 1 64.535 64.556 3 0.012089 19761 20230619_1888_Aki_TMTPro18x_K_F8 58.164 40.675 40314 35130 41104 38720 30294 40787 36768 36210 40841 49089 49906 46475 58709 43752 42819 64301 56085 56675 37298 32189 41516 38855 32555 40980 36856 37657 41779 48834 51121 47250 58850 46330 44672 63789 53538 53909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35828000 27653 57 25978 51922 41894 41894 1 9606 Homo sapiens 0.09135853458542442 TSPPPAIATTIAMTLGNDLQR Unmodified 2167.1307 0.13070318 4602 Q9NVH2-4;Q9NVH2-3;Q9NVH2-2;Q9NVH2;D3DT96 INTS7 Integrator complex subunit 7 yes no 0 0 0 3 0 1 64.691 64.723 3 4.8403E-08 20431 20230619_1882_Aki_TMTPro18x_K_F3 106.86 94.944 21524 16723 22448 20030 15858 24880 20945 22240 24257 23902 25036 21405 31997 22396 27048 20544 19760 18779 19903 15341 22621 20028 17189 24711 20943 22938 24559 23997 25930 21881 32151 22995 27152 20604 18970 17858 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23848000 27654 4602 25979 51923 41895 41895 1 9606 Homo sapiens 0.09382305863664442 TSPSSPAPLPHQEATPR Unmodified 1771.8853 0.88531118 3386 P04920;Q59GF1;P04920-3;Q99654;P04920-2;Q9UEY6;Q8TAG3;Q9UEY5;Q9UEY4;A0A7I2V5T6 SLC4A2 Anion exchange protein 2;Anion exchange protein yes no 0 0 0 5.5 0.5 1 1 35.21 35.281 3 1.6272E-19 7725 20230619_1886_Aki_TMTPro18x_K_F6 147.92 122.86 13929 9584.4 13841 14533 11714 13455 14441 14827 17567 15491 16483 16522 18626 13765 15109 16145 19065 14807 12867 8819.9 14040 14253 12417 13712 14504 15073 17670 15652 17053 16632 18764 14422 15647 16111 18173 14094 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37562000 27655 3386 25980 51924;51925 41896 41896 1 9606 Homo sapiens 0.03024393515806878 TSPSVTPTPAR Unmodified 1112.5826 0.58258722 4287 Q8WXE0-2;Q8WXE0 CASKIN2 Caskin-2 yes no 0 0 0 6.5 0.5 1 1 34.091 34.155 2 0.00089851 6943 20230619_1887_Aki_TMTPro18x_K_F7 128.38 99.045 23503 17311 23225 23581 26221 30918 29284 27487 37289 29392 32133 30871 32008 26812 28624 24064 34747 34739 21717 15905 23669 23390 27108 30617 29584 28367 37301 29669 33193 31122 32514 27667 29477 24840 33186 32882 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 11185000 27656 4287 25981 51926;51927 41897;41898 41898 2 9606 Homo sapiens 0.03079922638039534 TSQDFLFSQLQYLPFSNK Unmodified 2162.0684 0.068420501 4301 Q92621;B4DE72;U3KQ97 NUP205 Nuclear pore complex protein Nup205 yes no 0 0 0 4 0 1 65.266 65.276 3 0.00022507 20526 20230619_1883_Aki_TMTPro18x_K_F4 76.761 66.126 17609 14540 17354 19383 17019 18488 17091 18580 19340 22040 21379 21919 26894 22300 17544 32032 26234 29983 16282 13350 17655 19161 17706 18765 17311 19067 19680 22082 22073 22291 26834 23507 18566 31870 25042 28486 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10939000 27657 4301 25982 51928 41899 41899 1 9606 Homo sapiens 0.033869027869968704 TSQDYQALTVHDNLAMK Unmodified 1933.9204 0.92037606 4409 Q9BPX3;Q6NUR1 NCAPG Condensin complex subunit 3 yes no 0 0 0 6 0 1 50.318 50.395 3 9.8131E-14 14088 20230619_1886_Aki_TMTPro18x_K_F6 160.97 143.48 40291 31875 44802 43438 37529 44575 40468 39463 46729 55054 52262 52313 60485 50576 50032 57772 64063 55413 37283 29279 45017 42929 39655 44861 40856 41094 47527 54718 53714 53164 60979 52614 51871 57791 61100 52688 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51234000 27658 4409 25983 51929 41900 41900 1 9606 Homo sapiens -0.009227317385921197 TSQIFLAK Unmodified 906.51747 0.51746776 1566 Q9UPN3-2;Q9UPN3-3;H3BPE1;A0A590UJG2;H3BQK9;Q9UPN3-4;Q9UPN3;A0A7P0MQR8;H0Y390;E9PNZ4;A0A5F9ZGX0 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 0 0 0 3 0 1 51.939 52.005 3 0.047636 15032 20230619_1882_Aki_TMTPro18x_K_F3 58.676 25.556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27659 1566 25984 51930 41901 41901 1 9606 Homo sapiens 0.060469729028341135 TSQLGDSPFYPGK Unmodified 1395.667 0.66704513 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 8 0 1 53.014 53.089 2 0.00027164 14869 20230619_1888_Aki_TMTPro18x_K_F8 128.01 98.928 15358 12762 14264 15180 12522 16855 11784 14598 14194 20605 20524 18445 21836 18926 18385 22540 18815 21437 14195 11704 14559 15153 13157 16860 12021 15221 14606 20428 20799 18847 22078 19698 18804 22519 18016 20363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8374600 27660 68 25985 51931 41902 41902 1 9606 Homo sapiens -0.01496171335861618 TSQMQELHK Unmodified 1100.5284 0.52844316 2249 Q6IAP9;Q5T1M7;B2R7V4;Q59EL4;O43172-2;O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 yes no 0 0 0 6 0 1 38.253 38.329 3 4.499E-05 8864 20230619_1886_Aki_TMTPro18x_K_F6 145.99 97.348 49801 38805 45558 51318 65339 70490 54625 60969 82450 57594 68306 59964 56812 57939 58808 51571 77325 62970 46004 35635 46960 51027 66069 69597 56551 62820 81767 58528 70181 60714 58536 59472 60739 52599 73706 59741 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64645000 27661 2249 25986 51932 41903 41903 1 9606 Homo sapiens -0.01779992785191098 TSQSEEEEAPR Unmodified 1261.5422 0.54223854 4160 Q7RTP6;A0A5F9ZHV5;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5;J3KSK6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 yes no 0 0 0 1 0 1 29.166 29.166 2 0.010005 5685 20230619_1880_Aki_TMTPro18x_K_F1 73.067 65.686 1917.3 1254.7 2896.6 3771.6 2343.4 3808.6 2645.8 2079.7 1807.6 1318.1 2821.4 4332.7 2368.6 4039.6 4440.1 1364.6 5349 5030.3 1778.1 1168.8 2859.3 3593.8 2490.6 3800.6 2626.1 2230.8 1924.7 1467.4 2842.7 4244.3 2545.3 4029.3 4510.8 1629.9 5106.9 4740.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2175000 27662 4160 25987 51933 41904 41904 1 9606 Homo sapiens -0.07807088543063401 TSRPENAIIYNNNEDFQVGQAK Unmodified 2507.2041 0.20407913 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8;B4DVU1 HEL107;TKT Transketolase yes no 0 0 1 5.5 0.957 1 2 2 1 49.101 49.172 3;4 4.0722999999999997E-23 13239 20230619_1885_Aki_TMTPro18x_K_F5 174.2 160.19 105820 81622 94959 103670 86360 103360 102570 98736 213030 153890 149230 145210 165510 143930 133990 184130 161970 163360 97732 74926 97297 102870 91142 104430 105810 102670 208050 152520 156710 147810 166990 150600 138630 183080 154710 155380 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1532099999.9999998 27663 3523 25988 51934;51935;51936;51937;51938;51939 41905;41906;41907;41908 41907 4 9606 Homo sapiens 0.010765258398350852 TSSAETPTIPLGSAVEAIK Unmodified 1870.9888 0.9887732 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;B4DT20;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 0 0 6.5 0.5 1 1 60.992 61.042 3 9.4318E-15 18547 20230619_1886_Aki_TMTPro18x_K_F6 158.98 135.04 78791 68234 72579 73418 89016 135810 90576 82707 152030 77059 76796 74363 97117 79234 79126 93960 88775 84280 72835 62510 74551 74509 91643 131290 93025 87991 148180 78353 83175 75838 97642 82357 81388 93607 84815 80169 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1199900000 27664 3954 25989 51940;51941 41909 41909 1 9606 Homo sapiens 0.08811836112931815 TSSAFVGK Unmodified 795.41267 0.41266834 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491;A0A7I2V4A5;H7BZR6 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 3.67 3.09 1 1 1 42.707 42.735 2 0.0027865 11288 20230619_1880_Aki_TMTPro18x_K_F1 121.31 77.178 244350 128690 271200 297080 357790 397090 312470 347440 372960 285090 382890 413540 387630 350190 336740 228170 442710 418020 225640 119350 274720 287100 363590 392430 319670 356620 376590 295530 392740 411520 393250 356990 348510 242290 422390 395120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 151790000 27665 832 25990 51942;51943;51944 41910;41911 41910 2 9606 Homo sapiens 0.006778514262919089 TSSDPTCVEK Unmodified 1122.4863 0.48630357 3228 O14980;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V3N0;A0A7I2V4A3;A0A7I2YQX3;C9JKM9;C9J673 XPO1 Exportin-1 yes no 0 0 0 3 0 1 38.517 38.571 2 0.00083461 9010 20230619_1882_Aki_TMTPro18x_K_F3 116.52 69.626 19762 11344 24329 24971 33191 37777 25486 30956 30044 23240 34676 45188 31902 31795 31720 14803 40729 42132 18275 10506 24470 24234 33572 37037 26308 31878 30505 24572 35311 44350 32674 32345 32657 16738 38892 39723 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15238000 27666 3228 25991 51945 41912 41912 1 9606 Homo sapiens -0.07004012984225483 TSSFAEPGGGGGGGGGGPGGSASGPGGTGGGK Unmodified 2432.0589 0.058871461 98 P49840;A0A024R0L5;A0A7I2V2H8;A0A7I2V627;A0A7I2V553 GSK3A Glycogen synthase kinase-3 alpha yes no 0 0 0 6 0 1 42.978 43.071 4 0.0045162 10834 20230619_1886_Aki_TMTPro18x_K_F6 59.048 45.818 22862 15705 22623 22353 23868 27583 27621 23514 30473 25919 27128 29127 34714 24960 26185 31889 32296 29711 21117 14442 23023 22089 24804 27392 27708 24379 30743 26178 28331 29286 34759 26266 27143 31797 30824 28252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48357000 27667 98 25992 51946 41913 41913 1 9606 Homo sapiens -0.09987562027208696 TSSGDASSLSIEETNK Unmodified 1624.7428 0.74278885 3252 O43290;E9PQI8 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 0 2.5 0.5 1 1 45.155 45.234 3 3.7943E-11 11960 20230619_1882_Aki_TMTPro18x_K_F3 155.43 139.64 59660 45831 64121 68148 72875 92429 76000 78915 102280 83284 104490 95971 103530 76241 79153 87640 97886 94071 55179 42146 64942 67266 75213 91246 77264 81648 102700 84365 106950 96217 104460 79954 81994 88228 93449 89295 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 307830000 27668 3252 25993 51947;51948 41914 41914 1 9606 Homo sapiens -0.04459283736900943 TSSISGPLSPAYTGQVPYNYNQLEGR Unmodified 2798.3511 0.3511373 3779 Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 1.5 0.5 1 1 59.671 59.678 3 6.1366E-14 18527 20230619_1881_Aki_TMTPro18x_K_F2 136.34 129.38 17742 13058 14203 12320 16490 17646 18894 17996 19770 20882 18204 18553 21277 19977 20237 20772 19219 22308 16368 11957 14746 12589 17014 17457 18933 18428 20046 20880 18893 18984 21579 20600 20545 20948 18420 21160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84342000 27669 3779 25994 51949;51950 41915;41916 41916 2 9606 Homo sapiens 0.02389577934081899 TSSLDPNDQVAMGR Unmodified 1489.6831 0.6831059 1692 A0A7P0TAR0;A0A7P0T868;Q9NY61;A0A7P0TBI0;A0A7P0Z4P2;A0A087WTH8;A0A087WWS8;A0A0J9YWE9 AATF Protein AATF yes no 0 0 0 4 0 1 43.858 43.902 2 2.0678E-11 11219 20230619_1883_Aki_TMTPro18x_K_F4 184.24 173.72 20295 15946 18037 15968 19385 23265 20033 18139 25660 25557 25351 21833 31025 25573 20487 30314 31200 26542 18745 14605 18521 16231 20076 22860 20332 19078 25822 25336 26234 22481 30988 26510 21661 30148 29716 25266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12807000 27670 1692 25995 51951 41917 41917 1 9606 Homo sapiens -0.042148331612906986 TSSPEESIR Unmodified 1004.4775 0.47745344 4740 Q9Y4G6;A0A1B0GVU7;G1UI21;H0YMT1 TLN2 Talin-2 yes no 0 0 0 2 0 1 32.98 33.038 2 0.00087646 6886 20230619_1881_Aki_TMTPro18x_K_F2 121.05 85.168 21458 17257 25737 26467 39379 38574 39108 36581 44921 28218 47202 50725 35972 32911 36252 26914 51505 47707 19872 15873 26003 26119 39766 38035 39606 37292 45427 29669 47852 49846 37112 34221 37644 28338 49106 45106 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18557000 27671 4740 25996 51952 41918 41918 1 9606 Homo sapiens -0.02460618558382066 TSSQLVTMHDLK Oxidation (M) 1374.6813 0.68131498 4749 Q9Y5Q8-2;Q9Y5Q8;Q9Y5Q8-3;Q5T7U1;B7Z1V3;H7BY84;H0Y5D2;Q9NXK9 GTF3C5 General transcription factor 3C polypeptide 5 yes no 0 1 0 7 0 1 40.964 41.032 3 0.015943 9692 20230619_1887_Aki_TMTPro18x_K_F7 59.185 44.212 29139 24451 22494 25923 33005 31212 30043 28501 43897 27888 35017 29021 32759 28999 31638 30410 33937 26757 26898 22399 23576 26134 33373 31122 30870 29290 43521 28296 36201 29439 33465 29976 32309 30345 32398 25479 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38374000 27672 4749 25997 51953 41919 41919 2896 1 9606 Homo sapiens 0.008961578207845378 TSSQPGFLER Unmodified 1120.5513 0.55128709 198 A0A024R2F9;Q9BTV4;A0A0S2Z5N2 TMEM43 Transmembrane protein 43 yes no 0 0 0 5.5 0.5 1 1 41.322 41.412 2 1.0409E-06 10147 20230619_1885_Aki_TMTPro18x_K_F5 179.09 124.31 104970 92355 102580 130220 177610 189430 126640 119310 160960 117150 137110 145700 146000 121270 151440 140960 155300 169870 97088 84833 105670 129010 177190 185430 131650 126710 161020 119550 142280 145800 148980 126980 154060 142980 148650 160980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 183430000 27673 198 25998 51954;51955 41920 41920 1 9606 Homo sapiens -0.004166503960504997 TSSSSRPLPEVR Unmodified 1314.6892 0.68917755 1908 A1X283 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 0 0 1 7.5 0.5 1 1 32.513 32.56 3 2.9259E-07 6555 20230619_1888_Aki_TMTPro18x_K_F8 159.77 117.79 48305 39651 46053 43206 91087 96728 77861 77220 94077 66238 78041 74163 79742 69685 59996 103230 100660 87296 44650 36336 47642 44045 90687 93303 79710 79873 94210 67851 80844 74898 80468 73762 63835 102170 95821 83132 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75053000 27674 1908 25999 51956;51957 41921;41922 41922 2 9606 Homo sapiens 0.04442053132561341 TSSTLSEDQMSR Oxidation (M) 1356.5827 0.58272315 2168 K7ENH3;K7EIV6;K7EKH3;B4DPV9;A8MYT4;Q8NEB9 PIK3C3 Phosphatidylinositol 3-kinase;Phosphatidylinositol 3-kinase catalytic subunit type 3 yes no 0 1 0 2 0 1 31.734 31.797 2 0.079501 6420 20230619_1881_Aki_TMTPro18x_K_F2 52.725 43.862 6935.2 5886.8 5643.9 6767.5 8718.2 9703 8504.6 11868 11286 7850.6 10241 7881 6534.9 8475.6 12381 7292.1 11949 8925.9 6404.4 5396.5 5895 6803.3 8815.1 9635.9 8676.6 11851 11280 8153.6 10388 8030.7 7086.6 8650.5 12434 7456.2 11416 8471.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5493700 27675 2168 26000 51958 41923 41923 1344 1 9606 Homo sapiens -0.08130490214944075 TSSTNEDEDLNPEQK Unmodified 1705.7279 0.72786706 357 B4DZH5;A0A024R5T1;A0A024R5Z0;Q99081;Q99081-3;B4DGI9;B4DZP2;F5GY10;Q99081-4;Q99081-2 TCF12 Transcription factor 12 yes no 0 0 0 1 0 1 41.745 41.745 3 1.8439E-05 10885 20230619_1880_Aki_TMTPro18x_K_F1 106.42 94.984 15995 9772.9 13860 15396 10661 16190 14078 17123 18928 17866 19515 20020 16773 17050 16069 19633 25314 22353 14750 9002.8 14223 15090 11468 16312 14159 17440 19022 18081 19875 20126 17203 17812 16881 19829 24110 21213 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47627000 27676 357 26001 51959 41924 41924 1 9606 Homo sapiens -0.09676775604884824 TSSVSNPQDSVGSPCSR Unmodified 1763.7744 0.7744401 1197 F5H836;F5GZ78;B3KVL0;A0A140VJQ8;A0A1B0GU60;Q59GS5;A0A1B0GTU4;P49023-2;P49023;P49023-3 PXN Paxillin yes no 0 0 0 5 0 1 36.597 36.689 3 8.9318E-08 8167 20230619_1885_Aki_TMTPro18x_K_F5 131.61 118.82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27677 1197 26002 51960 41925 41925 1 9606 Homo sapiens -0.07689614254604749 TSTAPAASPNVR Unmodified 1170.5993 0.59929991 332 A0A024R5C5;P11498;A0A494C101;A0A494C0T2;A0A494C016;P11498-2;A0A494BZT5 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 6 0.816 1 1 1 32.168 32.238 2 5.013E-05 6591 20230619_1886_Aki_TMTPro18x_K_F6 152.04 129.26 28625 16571 37283 36419 49499 59536 33982 43551 42219 38583 66997 78116 59223 59977 67421 28753 65596 70336 26486 15346 37329 35400 50064 58023 35478 45443 43487 40467 67323 76799 61118 60804 68094 31862 62812 66348 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 54062000 27678 332 26003 51961;51962;51963 41926;41927;41928 41927 3 9606 Homo sapiens 0.020824235239842892 TSTAPLDR Unmodified 859.43995 0.43994572 2648 B7ZB41;B4E290;Q6NUK1-2;Q6NUK1;A0A3B3IU96 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes no 0 0 0 3.5 0.5 1 1 32.872 32.936 2 0.0019712 6683 20230619_1883_Aki_TMTPro18x_K_F4 134.15 78.248 57770 36637 81295 83391 147920 153040 99151 119070 119560 63151 92081 105970 93306 89372 92247 52663 116890 102470 53523 33935 81626 81159 146950 148590 103450 122390 119400 68235 95930 105010 95243 90796 94943 56446 111500 96848 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77316000 27679 2648 26004 51964;51965 41929;41930 41930 2 9606 Homo sapiens 0.00460334966658138 TSTESFAPR Unmodified 994.47197 0.47197413 1383 E9PMR6;A0A2X0SFF5;Q9NZN5-2;Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 yes no 0 0 0 5 0 1 36.76 36.852 2 0.018798 8231 20230619_1885_Aki_TMTPro18x_K_F5 78.113 44.11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27680 1383 26005 51966 41931 41931 1 9606 Homo sapiens -0.025482973501880224 TSTPEDFIR Unmodified 1064.5138 0.51383895 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 3.5 0.5 1 1 46.16 46.221 2 0.00023514 12405 20230619_1882_Aki_TMTPro18x_K_F3 162.25 82.784 220080 168970 192050 207270 204860 263530 238700 224450 261240 254770 269190 283210 273800 251860 261920 297260 277130 294070 203210 155050 197770 206880 213050 261220 239380 232830 265170 256780 276150 285160 278870 263120 267590 297720 265120 279280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 277480000 27681 1292 26006 51967;51968 41932 41932 1 9606 Homo sapiens -0.015837416616705013 TSTPFGSGR Unmodified 908.43519 0.4351947 1940 A4D1W6;Q8TAP9 C7orf11;MPLKIP M-phase-specific PLK1-interacting protein yes no 0 0 0 8 0 1 36.66 36.647 2 0.0013765 8137 20230619_1888_Aki_TMTPro18x_K_F8 116.37 90.545 45659 35607 41085 41488 59447 65776 51106 53759 73508 45035 49629 47902 40143 37275 51409 55082 62636 45502 42172 32656 42395 41733 60127 64390 52681 55487 72574 46133 51631 48179 41863 39707 52712 54521 59703 43383 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31728000 27682 1940 26007 51969 41933 41933 1 9606 Homo sapiens -0.02268549176073975 TSTSAVPNLFVPLNTNPK Unmodified 1899.0102 0.010177341 1741 P35611-3;E7EV99;P35611;P35611-4;P35611-6;P35611-2;A0A804HL01;E7ENY0;H0Y9H2;Q4TT76 ADD1;LA04NC01-25A3.2-001 Alpha-adducin yes no 0 0 0 4 0 1 61.79 61.793 3 0.00013515 19084 20230619_1883_Aki_TMTPro18x_K_F4 84.94 72.108 60343 48007 51571 65204 48353 63677 50777 52043 55473 56182 58414 67309 62851 63718 62494 80292 60177 74801 55721 44095 53154 64373 50654 64206 51233 54116 56385 56910 60064 67719 64055 66655 63534 80061 57701 71051 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 423120000 27683 1741 26008 51970 41934 41934 1 9606 Homo sapiens 0.096632659323177 TSTSQAVFR Unmodified 995.50361 0.50360861 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;C9J7S3;C9JLC1 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 5.33 3.09 1 1 1 36.977 36.994 2 6.1644E-05 8768 20230619_1880_Aki_TMTPro18x_K_F1 161.86 141.94 446490 358390 360220 353920 538340 613360 507060 503930 763440 137560 139860 115090 113360 98628 282870 136880 174270 94173 412150 328180 375810 361360 545110 598010 520270 512370 736310 159320 171820 117750 124870 104240 277820 135040 167230 90192 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 299930000 27684 1207 26009 51971;51972;51973 41935;41936;41937 41935 3 9606 Homo sapiens 0.005676954037653559 TSTTSSMVASAEQPR Oxidation (M) 1567.7148 0.71479996 2890 E7EMN6;P41236;Q6NXS2;E7EUI7;Q6NXS1 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2;Protein phosphatase inhibitor 2-like protein 3 yes no 0 1 0 3 0 1 33.047 33.118 3 0.00029144 6820 20230619_1882_Aki_TMTPro18x_K_F3 88.706 77.877 8270 5225 8487.5 10952 11260 10633 11181 12907 13531 11723 12383 14748 13898 10856 9793 7986.1 9608.4 10040 7637.8 4832.7 8659.3 10574 11462 10822 11351 12993 13604 11999 12836 14681 13931 11180 10010 8196.8 9198 9512.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7923900 27685 2890 26010 51974 41938 41938 1718 1 9606 Homo sapiens -0.04634885197970107 TSTTSSMVASAEQPR Unmodified 1551.7199 0.71988533 2890 E7EMN6;P41236;Q6NXS2;E7EUI7;Q6NXS1 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2;Protein phosphatase inhibitor 2-like protein 3 yes no 0 0 0 4.5 0.5 1 1 39.87 39.936 3 8.9009E-06 9491 20230619_1885_Aki_TMTPro18x_K_F5 114.21 103.42 70734 54277 63352 69070 80689 98858 80467 73284 116150 85065 100800 100600 104640 87217 76934 107170 126360 111590 65324 49826 65282 68894 82597 97086 82197 76961 115580 85917 104260 101000 105410 91467 81605 107520 120320 105990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104080000 27686 2890 26010 51975;51976 41939 41939 1 9606 Homo sapiens -0.03390581335361276 TSVDAAEDYAEGVR Unmodified 1481.6634 0.66341631 3113 I3NI32;Q02127 DHODH Dihydroorotate dehydrogenase (quinone), mitochondrial yes no 0 0 0 1 0 1 47.655 47.655 2 0.0012719 13407 20230619_1880_Aki_TMTPro18x_K_F1 91.858 73.59 21930 15520 19774 18982 17733 22919 18193 18583 26060 25672 28774 30791 33420 25376 25500 35344 34696 39624 20244 14246 20232 18938 18642 22772 18571 19475 26214 25727 29599 30850 33572 26900 26633 35561 33142 37572 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31250000 27687 3113 26011 51977 41940 41940 1 9606 Homo sapiens -0.05814885900394984 TSVETALR Unmodified 875.47125 0.47124585 1928 Q53GE2;Q53GC7;A4D0V4;P47755;C9JUG7;F8W9N7;P47755-2;B4DE01 CAPZA2 F-actin-capping protein subunit alpha-2 yes no 0 0 0 4.5 0.5 1 1 38.728 38.795 2 0.00016432 9038 20230619_1883_Aki_TMTPro18x_K_F4 171.38 130.81 229710 175100 193830 208910 213420 219920 214540 221480 268930 253260 289770 274130 269030 227780 243710 298450 328650 279380 212040 160640 200230 208380 220220 221660 217990 227000 271650 254900 295270 275910 274110 240180 253240 297560 313290 265740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 292820000 27688 1928 26012 51978;51979 41941;41942 41941 2 9606 Homo sapiens 0.02852908000750176 TSVIQGIHTDHNTLK Unmodified 1662.8689 0.86893283 4069 Q5U5X0 LYRM7 Complex III assembly factor LYRM7 yes yes 0 0 0 8 0 1 41.964 41.961 4 8.1777E-06 10320 20230619_1888_Aki_TMTPro18x_K_F8 117 94.521 15795 14720 15982 16974 18142 16714 17343 18826 20036 16509 20924 16606 19947 17915 21746 17980 21457 21147 14619 13490 16253 16960 18628 16981 17624 19022 20278 16818 21360 16921 20479 18443 22043 18258 20531 20053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17991000 27689 4069 26013 51980 41943 41943 1 9606 Homo sapiens 0.06401312349703403 TSVLEMIAQAR Unmodified 1217.6438 0.64380726 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YD53;A0A2R8YGE5;A0A2R8Y4Q3;A0A2R8YE54;A0A2R8Y4G4 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 2 0 1 61.771 61.781 3 0.013617 19384 20230619_1881_Aki_TMTPro18x_K_F2 67.08 52.389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27690 2865 26014 51981 41944 41944 1 9606 Homo sapiens 0.04369111345795318 TSVPAPLNSCLLK Unmodified 1398.7541 0.754086 4678 Q9UKN8;Q05CN7;F2Z356 GTF3C4 General transcription factor 3C polypeptide 4 yes no 0 0 0 3 0 1 56.764 56.801 3 6.5069E-11 17112 20230619_1882_Aki_TMTPro18x_K_F3 143.25 116.15 208280 171600 200470 212040 190480 232450 224140 209780 241960 238930 224550 208630 248370 195960 235710 278440 237100 227410 192540 157440 204250 211080 199730 232940 224590 216700 244880 239030 232180 212900 252030 206940 240230 275510 226780 216570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 358290000 27691 4678 26015 51982 41945;41946 41945 2 9606 Homo sapiens 0.07065911614176912 TSVPVLDAELFIPPK Unmodified 1624.9076 0.90760975 1618 O95163;B4E3I9;A0A6Q8PHC9;Q4LE38;Q8N516;A0A6Q8PFH9;F5H2T0;B3KXE7;A0A6Q8PF66;A0A6Q8PGW3;Q68DI5;B3KMT0;B3KNB2;B3KVS1 IKBKAP;IKBKAP variant protein;DKFZp781H1425 Elongator complex protein 1 yes no 0 0 0 8 0 1 63.971 63.994 3 1.8562E-05 19533 20230619_1888_Aki_TMTPro18x_K_F8 106.32 86.484 27826 23339 27742 30520 27100 27155 31022 29549 32567 31981 33581 32743 37875 32029 39068 42744 34430 36468 25734 21424 28193 30188 28278 27777 31103 30101 33136 32215 34602 33210 38568 33619 39472 42421 33001 34696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109110000 27692 1618 26016 51983 41947 41947 1 9606 Homo sapiens 0.1201522493149696 TSVQTEDDQLIAGQSAR Unmodified 1817.8755 0.87553435 1411;3506 P35221-2;P35221;A0A384MDY0;B4E2G8;G3XAM7;B4DU00;B4DKT9;P35221-3;B3KSR8;P26232-2;P26232-5;P26232;P26232-3;Q49AD3;F6KRI5;A0A0A0MRI5;P26232-4;P26232-6;A0A0A0MTJ6 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 no no 0 0 0 2 0 1 44.093 44.176 3 0.0003294 11798 20230619_1881_Aki_TMTPro18x_K_F2 76.704 65.76 51861 45796 54611 53825 72013 62676 63330 68956 71535 50372 64954 57966 56989 48626 61284 59528 63887 55213 47999 41985 55482 53841 73054 62895 64625 69491 72071 52153 66569 58250 58626 51028 62374 59417 61041 52519 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124260000 27693 1411;3506 26017 51984 41948 41948 1 9606 Homo sapiens -0.0006883928024308261 TSVSSVSASPSR Unmodified 1163.5782 0.57823012 3438 P12036-2;P12036 NEFH Neurofilament heavy polypeptide yes no 0 0 0 7 0.816 1 1 1 33.427 33.466 2 1.2309E-12 6677 20230619_1887_Aki_TMTPro18x_K_F7 225.01 194.93 50021 25976 59102 32673 15310 20871 20580 24551 23083 40903 58693 55893 46481 47602 76478 23377 70703 44967 46217 23889 58438 32361 19527 22090 20663 25283 24806 40876 58046 55717 49282 48081 76609 25278 67526 42575 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 36030000 27694 3438 26018 51985;51986;51987 41949;41950 41950 2 9606 Homo sapiens 0.0029841342447980423 TSWAGAPVHLGQGQFLK Unmodified 1795.937 0.93695282 2830 D3DVC4;P48681;Q2YDX4 NES Nestin yes no 0 0 0 4 0 1 55.438 55.449 4 1.7942E-06 16392 20230619_1883_Aki_TMTPro18x_K_F4 114.54 92.872 50885 42351 50522 52373 55363 65308 62278 60820 78816 60465 57798 56081 66710 52008 54737 65165 74277 61907 47054 38854 51448 52239 57364 64940 62878 62424 78481 61040 60658 57014 67234 54503 56999 65062 70793 58879 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30351000 27695 2830 26019 51988 41951 41951 1 9606 Homo sapiens 0.07082182000340254 TSYAQHQQVR Unmodified 1216.5949 0.59488324 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;B7Z3M5;D6RB09;E9PFI5;H0Y9Y4;H0Y8L7;D6R9B6;D6RAS7 RPS3A 40S ribosomal protein S3a yes no 0 0 0 6.5 1.12 1 1 1 1 25.581 25.641 3 3.7376E-06 4598 20230619_1886_Aki_TMTPro18x_K_F6 142.43 121.06 12229 6779.9 18516 15935 25090 29592 22011 20809 17872 8661.3 13467 11940 11383 9170 13956 8257.7 13379 11806 11333 6265.9 18375 15498 25442 28656 22242 21537 18234 9433.2 13934 11888 11771 9505.8 13972 8476.2 12795 11181 4 3 4 4 4 4 4 4 4 3 4 3 3 3 3 3 4 4 209230000 27696 3694 26020 51989;51990;51991;51992 41952;41953;41954;41955 41953 4 9606 Homo sapiens -0.004750408989366406 TSYFLCYEPPTIK Unmodified 1617.7749 0.77488102 4125 Q6PCE3 PGM2L1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 2 0 1 61.779 61.789 3 0.045329 19409 20230619_1881_Aki_TMTPro18x_K_F2 45.79 42.07 44301 33383 40089 47141 36153 47392 46582 43529 48033 39869 41262 51397 52674 43846 48899 53042 50866 63851 40912 30682 41070 46457 38206 47782 46403 44670 48564 40854 43236 51387 53217 45979 49925 53742 48739 60484 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54674000 27697 4125 26021 51993 41956 41956 1 9606 Homo sapiens -0.00929542796802707 TSYGWIEIVGCADR Unmodified 1625.7508 0.75079153 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4;A0A6Q8PHI7;H7C443;A0A6Q8PFZ6 GARS Glycine--tRNA ligase yes no 0 0 0 6.5 0.5 1 1 61.896 61.941 3 0.00133 18668 20230619_1887_Aki_TMTPro18x_K_F7 75.316 46.511 55334 48637 61000 62696 45519 56758 53774 51579 62987 74895 69511 81879 73271 62502 74736 86370 70477 100580 51233 44632 61272 62081 48774 57718 54065 53708 63975 74628 71275 82101 74724 66395 75814 87156 67681 95267 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166700000 27698 3576 26022 51994;51995 41957 41957 1 9606 Homo sapiens -0.037053832304764 TTAAFQQGK Unmodified 950.48214 0.48214489 941 Q5TAL2;Q5TAL4;Q53G33;A0A0A0MRR7;P09234 SNRPC U1 small nuclear ribonucleoprotein C yes no 0 0 0 4.5 3.5 1 1 40.296 40.291 2 8.5436E-05 9591 20230619_1888_Aki_TMTPro18x_K_F8 182.73 152.48 108550 59783 147100 132960 198980 200120 155390 194210 76466 94371 143180 155030 114170 114430 164680 73305 164750 128400 100460 55392 146890 129040 200940 196990 157010 196000 85099 102390 142740 153200 119930 117160 166040 77735 157380 121500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68240000 27699 941 26023 51996;51997 41958;41959 41959 2 9606 Homo sapiens 0.00492310375057059 TTAAGGESALAPSVFK Unmodified 1505.7726 0.77257283 275;1599 A0A024R3Z1;A0A669KB77;P11137-3;P11137 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 0 7 0 1 53.617 53.684 3 0.0024099 15202 20230619_1887_Aki_TMTPro18x_K_F7 71.08 50.24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27700 275;1599 26024 51998 41960 41960 1 9606 Homo sapiens 0.03991744789755103 TTAAHGLELR Unmodified 1067.5724 0.57235688 3409 P08243-2;P08243;P08243-3;B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 5.5 0.5 1 1 35.113 35.184 3 2.0035E-07 7611 20230619_1885_Aki_TMTPro18x_K_F5 183.95 148.44 121690 90492 104370 100100 119500 129980 105720 104920 134450 109390 127080 162320 127270 109220 151420 117540 140150 136250 112330 82970 107640 100730 122640 128630 108300 109060 134990 111960 131040 160420 131030 114820 152730 119160 134180 129230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 343910000 27701 3409 26025 51999;52000 41961;41962 41961 2 9606 Homo sapiens 0.04127359703466027 TTAAMWALQTVEK Unmodified 1448.7334 0.73335055 440 K7ELQ9;A0A024R7D3;Q6UW68;K7EM09;K7EPR0 TMEM205;UNQ501 Transmembrane protein 205 yes no 0 0 0 2 0 1 62.02 62.03 3 3.2312E-06 19520 20230619_1881_Aki_TMTPro18x_K_F2 133.15 105.74 148900 139830 168010 154250 124000 138750 158130 174200 182880 181180 165600 176090 214080 168300 198560 208650 208090 211430 137960 128090 168330 154540 133180 142350 158350 175660 184310 182540 172950 178750 216140 176080 202750 209150 199030 200780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 256610000 27702 440 26026 52001 41963 41963 1 9606 Homo sapiens 0.026933212345056745 TTACTELR Unmodified 950.44913 0.4491302 573 A0A024R9G7;Q6PL18;A0A0B4J211 ATAD2 ATPase family AAA domain-containing protein 2 yes no 0 0 0 4 0 1 33.265 33.321 2 0.091716 6853 20230619_1883_Aki_TMTPro18x_K_F4 67.464 17.337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27703 573 26027 52002 41964 41964 1 9606 Homo sapiens -0.028076397393078878 TTANAIYCPPK Unmodified 1234.6016 0.6016081 3207 O00231;O00231-2;B4DTS5;J3QS13 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 1.5 0.5 1 1 45.494 45.535 3 0.00012923 12485 20230619_1880_Aki_TMTPro18x_K_F1 97.214 75.341 40999 23940 28627 36491 33437 45601 33166 50511 49712 35628 49925 58269 54290 31363 48104 38333 57863 48176 37748 22049 30236 35922 34480 45481 34007 50814 49651 37476 51450 57188 54881 33669 49500 38993 55202 45689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130050000 27704 3207 26028 52003;52004 41965 41965 1 9606 Homo sapiens -0.006308640625775297 TTAPVPEPTKPGDPR Unmodified 1561.81 0.81002097 2587 E7ERS3;B4DTK7;Q86VM9;H3BRN6 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 0 0 1 6.5 0.5 1 1 40.656 40.736 3 0.00069951 9528 20230619_1887_Aki_TMTPro18x_K_F7 85.45 62.976 105250 84858 94851 98915 109460 128690 109490 111040 135010 130820 141290 120540 137160 120390 123200 137330 137520 116230 97231 77816 97471 99134 112670 127460 111200 115140 136340 130890 144330 122910 139480 125050 126380 136540 131300 110700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 161480000 27705 2587 26029 52005;52006 41966;41967 41967 2 9606 Homo sapiens 0.05158836055352367 TTAQVLIR Unmodified 900.53927 0.53926584 435 A0A024R7A8;P15121;A4D1P0;C9JRZ8;C9JRZ8-2 AKR1B1;LOC402299;AKR1B15 Aldose reductase;Aldo-keto reductase family 1 member B15 yes no 0 0 0 3.67 3.09 1 1 1 41.659 41.683 2 0.0014551 10160 20230619_1888_Aki_TMTPro18x_K_F8 142.36 66.228 1289200 1033300 1106600 1250500 1283200 1385100 1274800 1251300 1438000 1187600 1374600 1259900 1261200 1080100 1340000 1199000 1451200 1177900 1190500 947960 1142800 1246700 1319100 1387500 1290900 1286200 1452300 1206400 1407900 1270200 1294700 1126300 1366500 1202500 1385600 1120000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 955890000 27706 435 26030 52007;52008;52009 41968;41969;41970 41970 3 9606 Homo sapiens 0.08501777651429165 TTASTQMNVQSSR Oxidation (M) 1425.6518 0.65180577 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9;H0YIM7;O75037-3;O75037-2;O75037-4;O75037 KIF21A;KIF21B Kinesin-like protein KIF21A;Kinesin-like protein;Kinesin-like protein KIF21B yes no 0 1 0 5 0 1 27.758 27.83 3 3.1317E-05 4936 20230619_1885_Aki_TMTPro18x_K_F5 113.99 101.36 2733.9 0 1204 2476 3894.8 2551.7 1885.5 1684.6 2602.2 2125.6 2570.3 3145.7 2390.4 1294.2 2628.7 2076.6 3120.8 1947 2500.4 0 1395.4 2289 3770.7 2554.1 2037.8 1795.3 2610.1 2155.9 2635 3081 2452.3 1439.3 2692.3 2069 2973.1 1854.9 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6816400 27707 4170 26031 52010 41971 41971 2688 1 9606 Homo sapiens -0.04399406195375377 TTASTQMNVQSSR Unmodified 1409.6569 0.65689115 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9;H0YIM7;O75037-3;O75037-2;O75037-4;O75037 KIF21A;KIF21B Kinesin-like protein KIF21A;Kinesin-like protein;Kinesin-like protein KIF21B yes no 0 0 0 6.5 0.5 1 1 33.313 33.4 2;3 2.9441E-07 6676 20230619_1887_Aki_TMTPro18x_K_F7 149.23 131.75 15233 6444.8 20141 16139 22661 28665 18177 17562 17958 13306 19553 23781 21430 19712 20315 10678 24511 25280 14081 5994.8 20067 15644 23232 27748 18594 18596 18357 14012 20101 23501 21770 20000 20852 11727 23417 23854 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11846000 27708 4170 26031 52011;52012 41972;41973 41973 2 9606 Homo sapiens -0.03155102332743809 TTCMSSQGSDDEQIKR Oxidation (M) 1857.7833 0.78329023 2109 E7EW69;A8K7M3;E7EX04;B5ME97;Q9P0V9;Q9P0V9-2;C9JEW2;C9JNR7 SEPT10 Septin-10 yes no 0 1 1 3 0 1 33.098 33.169 3 0.0010718 6821 20230619_1882_Aki_TMTPro18x_K_F3 95.236 86.305 16885 14185 20752 11249 27590 30470 21465 22615 21832 19793 22125 13605 16767 11912 28442 10951 16414 9866.1 15645 12966 20804 11881 27940 29180 22020 23536 22232 19974 22418 14052 17805 12308 27953 11020 15776 9406.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15574000 27709 2109 26032 52013 41974 41974 1329 1 9606 Homo sapiens -0.1112900868045017 TTCMSSQGSDDEQIKR Unmodified 1841.7884 0.7883756 2109 E7EW69;A8K7M3;E7EX04;B5ME97;Q9P0V9;Q9P0V9-2;C9JEW2;C9JNR7 SEPT10 Septin-10 yes no 0 0 1 3.5 0.5 1 1 36.676 36.727 3 5.2218E-11 8266 20230619_1882_Aki_TMTPro18x_K_F3 152.71 134.91 17318 19466 19276 13886 27985 27256 26065 26145 26407 23429 23928 20100 19920 16760 27505 14429 19610 13176 16066 17766 19517 14694 28287 26550 26397 26688 26782 23723 24484 20438 20807 17278 27325 14517 18795 12552 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26134000 27710 2109 26032 52014;52015 41975 41975 1 9606 Homo sapiens -0.09884704817818601 TTDDTTTDNYIAQGK Unmodified 1642.7322 0.73222416 2240 B4DXX1;B2R713;Q7Z2T5 TRMT1L TRMT1-like protein yes no 0 0 0 3 0 1 45.096 45.171 3 1.217E-07 11923 20230619_1882_Aki_TMTPro18x_K_F3 127.02 115.74 39418 25141 35117 43140 45725 46640 46065 44953 53349 43128 52677 51724 57082 45347 52635 54394 54125 55178 36366 23181 36237 42094 46650 46840 46640 46004 53874 43966 54267 51932 57883 47475 53693 54558 51779 52397 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45935000 27711 2240 26033 52016 41976 41976 1 9606 Homo sapiens -0.06343266391331781 TTDFSDFLSIVGCTK Unmodified 1689.792 0.79198764 228 A0A024R394;Q9UHD1;E9PPQ5;E9PIZ4;E9PSD5 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes no 0 0 0 1 0 1 64.838 64.838 3 0.0050536 20449 20230619_1880_Aki_TMTPro18x_K_F1 65.172 52.405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27712 228 26034 52017 41977 41977 1 9606 Homo sapiens -0.02531666981667513 TTDGSLQNTSSEGSR Unmodified 1538.6809 0.68085729 1771 A0A8I5KT56;Q06787-6;R9WQY1;A8MQB8;A0A8I5KZ21;G3V0J0;X5D907;Q06787-4;Q06787-7;Q06787-2;A0A8I5KWH0;A0A8I5KUC2;B4DZ17 FMR1 Fragile X mental retardation protein 1 yes no 0 0 0 2 0 1 31.791 31.853 3 1.6081E-05 6446 20230619_1881_Aki_TMTPro18x_K_F2 83.633 75.909 10832 6598.6 11783 11569 15047 17604 10979 14191 15737 13140 16921 21377 16498 17507 13560 11076 20408 19248 10007 6087.4 11936 11344 15278 17252 11466 14696 15802 13592 17311 21168 16741 17836 14203 11704 19452 18200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2405500 27713 1771 26035 52018 41978 41978 1 9606 Homo sapiens -0.0669359036539845 TTDGVYEGVAIGGDR Unmodified 1508.7107 0.71070086 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 2.5 0.5 1 1 47.266 47.343 3 8.309E-06 13224 20230619_1881_Aki_TMTPro18x_K_F2 114.69 93.834 133590 103020 127230 138730 143920 134390 154320 145880 159740 162650 170820 168610 187000 148680 175650 181650 189820 184540 123430 94629 130070 137100 148240 136540 155160 148720 162930 163640 175460 170260 189730 155830 179620 182170 181450 175270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 313330000 27714 161 26036 52019;52020 41979 41979 1 9606 Homo sapiens -0.023306066294026095 TTDGVYEGVAIGGDRYPGSTFMDHVLR Oxidation (M) 2928.3712 0.37122082 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 1 1 6.5 0.5 1 1 52.259 52.334 4 3.9035E-08 14932 20230619_1886_Aki_TMTPro18x_K_F6 101.71 94.437 28709 21503 28695 32491 30826 31518 32965 33796 34242 39724 38361 42931 42029 34029 35807 42498 42244 46813 26532 19779 29203 31884 31883 31993 33164 34529 35013 39905 39354 43115 42474 35857 36914 42790 40388 44400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126810000 27715 161 26037 52021;52022 41980 41980 101 1 9606 Homo sapiens -0.015829943976314098 TTDIVIR Unmodified 816.47052 0.47051757 4481 Q9C0C9;K7ES11 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes no 0 0 0 4.5 0.5 1 1 41.766 41.83 2 0.019836 10276 20230619_1885_Aki_TMTPro18x_K_F5 105.39 5.4711 195510 160780 182540 196480 228050 213220 184740 202340 243580 242080 301250 281890 261570 230300 257940 278850 302370 265880 180690 147500 187190 195720 231950 214220 190730 208500 247070 243730 304480 282730 268110 241730 264910 278680 288630 252800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 262710000 27716 4481 26038 52023;52024 41981 41981 1 9606 Homo sapiens 0.05494113351710439 TTDLLTDWEK Unmodified 1220.5925 0.5924832 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4 0.816 1 1 1 61.166 61.193 3 0.003979 18420 20230619_1885_Aki_TMTPro18x_K_F5 72.434 46.455 56527 46222 62502 57044 60642 83604 66115 60500 91628 65028 59033 63733 53234 51286 69298 72200 62365 69662 52315 42407 62956 57062 63444 81948 67106 63525 90530 65520 61910 64333 55336 54390 69823 72066 59788 66166 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 445530000 27717 3881 26039 52025;52026;52027 41982 41982 1 9606 Homo sapiens -0.008989341472670276 TTECSNTFK Unmodified 1086.4652 0.4651742 1896 A0MNN4;Q2TAY7;Q2TAY7-2 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes no 0 0 0 5 0 1 39.42 39.51 2 0.00057396 9328 20230619_1885_Aki_TMTPro18x_K_F5 145.72 101.59 23910 12011 30939 32318 36756 56756 34600 36577 33737 27848 42934 56542 36422 43062 41278 19593 49636 53356 22110 11177 30962 31224 37762 54980 35005 38526 34743 29502 43440 55551 37693 43597 42226 22034 47436 50306 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36409000 27718 1896 26040 52028 41983 41983 1 9606 Homo sapiens -0.07459978293081804 TTEDLFTVIHR Unmodified 1330.6881 0.68811492 1321 A0A1W2PQQ1;Q5HYW2;A0A0J9YY72 NHSL2 NHS-like protein 2 yes no 0 0 0 6 0 1 52.3 52.377 3 8.1306E-40 14951 20230619_1886_Aki_TMTPro18x_K_F6 294.24 230.96 54365 38471 42122 47472 37329 43075 48926 44517 65575 42384 39484 35338 41148 36089 47449 47230 45039 42687 50134 35317 43770 47148 39539 43923 49143 45347 64745 42791 41801 36254 42264 37789 48004 47031 43100 40601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100980000 27719 1321 26041 52029 41984 41984 1 9606 Homo sapiens 0.03599838763648222 TTEENQELVTR Unmodified 1318.6365 0.63647328 286 Q676U5;Q676U5-2;A0A024R494;A5YM60;Q676U5-3;E7EVC7;L7UQD0;Q9H7M5;Q17RG0;B7ZLM5;Q53SV2 ATG16L1;FLJ00045;FLJ10035 Autophagy-related protein 16-1 yes no 0 0 0 1 0 1 36.371 36.371 2 1.2611E-08 8530 20230619_1880_Aki_TMTPro18x_K_F1 180.66 158.02 34202 26639 30333 28914 26646 31139 27281 25233 37938 40356 45066 48027 46995 40936 37412 45292 51306 53076 31586 24416 31066 29055 28032 31196 27815 26605 38340 40216 45990 48149 47463 42695 39021 45856 48968 50323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36327000 27720 286 26042 52030 41985 41985 1 9606 Homo sapiens -0.010099497209239416 TTEGEEETESRVPGSTRPQR Unmodified 2245.0571 0.057080547 4288 Q8WXH0-2;Q8WXH0;A0A0C4DGK3;Q8WXH0-7;Q7Z362;Q8WXH0-13;Q8WXH0-3;Q6MZP0;Q8WXH0-5;Q8WXH0-10;Q8WXH0-4;Q8WXH0-12;Q8WXH0-11;Q8WXH0-6 SYNE2;DKFZp686J1895;DKFZp686M09200 Nesprin-2 yes no 0 0 2 2 0 1 31.141 31.205 4 1.5965000000000002E-29 6187 20230619_1881_Aki_TMTPro18x_K_F2 203.89 187.77 5283.6 5731.1 5126.5 4667.1 7425.4 6258.8 5512.9 6004.2 4762 3549.3 6502.1 4653 5055.9 4322.1 6238.6 5244 5265.2 4812 4894.4 5235.4 5249.3 4829.1 7462.1 6212.5 5650.8 6083.8 4956 3753 6516.4 4676.1 5259.9 4516.1 6263.9 5234.5 5044 4576.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9053400 27721 4288 26043 52031 41986 41986 1 9606 Homo sapiens -0.015645710451735795 TTEINFK Unmodified 851.43888 0.43888309 2949;3522 P29762;F1T0F7;B5MCB5;P29373;Q5SYZ4 CRABP1;CRABP2 Cellular retinoic acid-binding protein 1;Cellular retinoic acid-binding protein 2 no no 0 0 0 6.5 0.5 2 2 47.614 47.699 2;3 0.0011465 12490 20230619_1887_Aki_TMTPro18x_K_F7 171.47 74.392 706900 637780 632200 744530 1549700 1730000 1096300 1072400 1496000 1148900 1078200 1187800 1404000 1113100 1054600 1498600 1451700 1298500 653500 584620 663070 755200 1526000 1659300 1142800 1142000 1485200 1159800 1140500 1201900 1406100 1171100 1102800 1487200 1384100 1236000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2701800000 27722 2949;3522 26044 52032;52033;52034;52035 41987;41988 41988 2 9606 Homo sapiens 0.007221205977657519 TTEMETIYDLGTK Unmodified 1500.7018 0.70177565 4699 Q9Y230;B3KNL2;Q9Y230-2;M0R0Y3;B4DW30;X6R2L4 RUVBL2 RuvB-like 2 yes no 0 0 0 4 0.816 1 1 1 59.857 59.885 3 5.1466E-11 18261 20230619_1883_Aki_TMTPro18x_K_F4 180.18 176.46 225010 193280 231070 237660 196770 252170 234000 245420 270850 254660 267690 271540 285760 246810 272220 303960 289620 321430 208170 177290 233780 236590 208400 253660 235040 251430 273680 257420 275640 274150 290470 258450 278200 305410 277160 305000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 594940000 27723 4699 26045 52036;52037;52038 41989;41990 41989 2 9606 Homo sapiens -0.02854716310071126 TTEPGVTGLLLAVEGPAAK Unmodified 1823.004 0.0040293305 1532 A0A3B3IUD7;Q14690;B4DH82 PDCD11 Protein RRP5 homolog yes no 0 0 0 7 0 1 63.481 63.514 3 0.00011128 19428 20230619_1887_Aki_TMTPro18x_K_F7 79.311 65.907 105120 104200 147690 137610 112100 141950 118140 137820 109860 161150 145010 170140 171130 127440 146990 182860 190660 186720 97656 95606 145890 136310 119400 143060 118720 141670 114080 161730 148450 170800 172590 135890 152500 182960 181970 177320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 773080000 27724 1532 26046 52039 41991 41991 1 9606 Homo sapiens 0.12544747700803782 TTEQDLK Unmodified 833.41306 0.41306227 291 Q13148;A0A0A0N0L3;A0A024R4E2;A0A0A0N0N3;A0A087WYY0;A0A087X260;G3V162;B1AKP7;K7EN94;A0A0A0N0M3;A0A087WX29;K7EJM5;B4DRW3;A0A087WV68;A0A087WXQ5 TARDBP;TDP43 TAR DNA-binding protein 43 yes no 0 0 0 2.5 0.5 1 1 38.236 38.294 2 0.07081 8901 20230619_1882_Aki_TMTPro18x_K_F3 79.906 61.101 33730 20832 43020 41290 68407 60070 46321 64017 47710 32490 57029 70419 40211 47684 54468 31836 65380 58492 31213 19252 43275 40241 68302 59396 48090 64229 48826 35659 57455 68944 42352 49042 55607 33822 62402 55299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33262000 27725 291 26047 52040;52041 41992 41992 1 9606 Homo sapiens -0.010307736445270166 TTESHMDWEK Oxidation (M) 1278.5187 0.51866633 2929 E9PKP7;P17480-2;P17480;A0A994J4N4;A8K962;Q05BZ1;E9PMM2;Q9BQR2 UBTF Nucleolar transcription factor 1 yes no 0 1 0 2.5 0.5 1 1 37.026 37.082 3 0.0017233 8427 20230619_1882_Aki_TMTPro18x_K_F3 83.499 72.394 59905 43442 52123 54676 77263 85579 66252 69499 88765 61744 75659 72516 68720 61423 73493 61303 73166 70899 55294 39884 53989 54682 78032 83809 68117 71870 88538 63211 77926 72762 70604 63713 74561 62192 69992 67246 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 111040000 27726 2929 26048 52042;52043 41993;41994 41994 1744 2 9606 Homo sapiens -0.1094522558121298 TTETQVLVASAQK Unmodified 1374.7355 0.73545904 1641 P12081;P12081-4;E7ETE2;A0A6Q8PHA5;Q52NV4;P12081-2;P12081-3;A0A6Q8PF47;A0A6Q8PHE3;B4DDD8;B3KWE1;B4E1C5;A0A6Q8PF07;A0A6Q8PHQ0 HARS;HRS Histidine--tRNA ligase, cytoplasmic yes no 0 0 0 7 0 1 48.623 48.71 3 0.0015778 12936 20230619_1887_Aki_TMTPro18x_K_F7 61.167 43.842 100550 77965 103300 109930 113570 119850 130720 127380 150160 117200 134380 133130 138240 113550 126020 138950 147890 131010 92969 71648 104910 108500 117570 120590 131380 129350 151120 119520 138780 133820 140390 119110 129630 138760 141170 124580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 342440000 27727 1641 26049 52044 41995 41995 1 9606 Homo sapiens 0.06308073244008483 TTFEDLIQR Unmodified 1121.5717 0.57168818 762 O94979-9;D6REX3;O94979-6;O94979-3;O94979-4;O94979-10;O94979-2;O94979;O94979-8;A0A1S5UZ19;A1LU61;A0A024RDH6;O94979-7;H7BXG7;H0Y8W8;H0YAF5 SEC31A;SEC31L1 Protein transport protein Sec31A yes no 0 0 0 4.5 0.5 1 1 54.973 55.012 2 0.00037345 15828 20230619_1885_Aki_TMTPro18x_K_F5 150.28 100.44 411950 332930 377690 385610 398410 485940 425210 421710 577010 454560 418200 415610 453880 386750 424850 501750 487560 526770 380630 305280 386940 386470 413630 482230 431760 436060 572700 456820 438090 422820 460890 406100 436430 503500 466160 499920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 292270000 27728 762 26050 52045;52046 41996;41997 41997 2 9606 Homo sapiens 0.0157652026375672 TTFFHHEYPWILSASDDQTIR Unmodified 2563.2132 0.21318726 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ITV3;A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 7 0 1 57.686 57.738 4 2.8633E-11 16879 20230619_1887_Aki_TMTPro18x_K_F7 124.35 109.89 29397 24896 26965 27428 23645 31435 26379 25968 30066 30999 30086 28110 31179 28065 31155 31229 32581 32552 27170 22814 27551 27551 24949 31353 26565 27043 30434 30980 30907 28670 31797 29119 31760 31408 31160 30904 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15097000 27729 3647 26051 52047 41998 41998 1 9606 Homo sapiens -0.005890808038202522 TTFYTALGR Unmodified 1028.5291 0.52909508 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8 XPO7 Exportin-7 yes no 0 0 0 3.5 0.5 1 1 49.802 49.857 2 0.0023042 14062 20230619_1882_Aki_TMTPro18x_K_F3 107.69 57.653 270550 211010 262940 254620 255200 298370 267430 287550 304370 256100 244200 214990 230210 215350 252090 272540 272260 243270 250040 193590 267570 254210 266200 298100 270190 293570 305510 259360 252650 220340 236640 225070 257180 271280 260100 231480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 291600000 27730 2083 26052 52048;52049 41999 41999 1 9606 Homo sapiens 0.015971699261854155 TTGEGTSLR Unmodified 920.45632 0.45632407 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 3 0.816 1 1 1 30.941 31.013 2 2.9844E-05 5974 20230619_1882_Aki_TMTPro18x_K_F3 167.04 90.192 36307 17421 44552 44440 60552 64602 46864 53674 51835 37406 62740 65351 53188 55775 55524 22969 66585 56176 33548 16197 44804 42862 61227 63487 48237 55138 52883 39552 63465 64695 54768 56097 56838 25592 63529 53043 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138980000 27731 3892 26053 52050;52051;52052 42000 42000 1 9606 Homo sapiens -0.007085838672310274 TTGFGMIYDSLDYAK Oxidation (M) 1696.7654 0.76543854 1364 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4;A0A2R8Y8A0 RPS24 40S ribosomal protein S24 yes no 0 1 0 6.5 0.5 1 1 61.689 61.736 3 1.0218E-07 18559 20230619_1887_Aki_TMTPro18x_K_F7 125.29 115.19 446120 360200 411210 509660 425040 444060 462450 424260 384940 462730 498200 405150 546540 468620 446640 592230 464080 544180 412220 330980 421390 501280 441010 453560 461860 436150 401450 463780 507310 416770 551450 487850 457740 590020 444410 517080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 951860000 27732 1364 26054 52053;52054 42001;42002 42002 860 2 9606 Homo sapiens -0.055073558729873184 TTGFGMIYDSLDYAK Unmodified 1680.7705 0.77052392 1364 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4;A0A2R8Y8A0 RPS24 40S ribosomal protein S24 yes no 0 0 0 7.5 0.5 2 2 63.071 63.099 2;3 8.4426E-11 19129 20230619_1888_Aki_TMTPro18x_K_F8 159.52 149.99 523910 453950 473050 517260 363420 518340 586260 577300 502420 552490 543500 546850 856030 635890 586250 762800 689080 698410 484230 416080 483640 517390 392830 525180 575710 585070 518650 559440 569320 558970 850310 660100 607500 760400 658380 664000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4490600000 27733 1364 26054 52055;52056;52057;52058 42003;42004 42003 2 9606 Homo sapiens -0.042630520103784875 TTGFTFVVDR Unmodified 1141.5768 0.57677356 2525 B4DM26;B4DLE7;Q6UWP7-3;Q6UWP7;B4DYR5;C9K0C3;Q6UWP7-2 LCLAT1 Lysocardiolipin acyltransferase 1 yes no 0 0 0 8 0 1 54.226 54.298 2 3.9027E-05 15382 20230619_1888_Aki_TMTPro18x_K_F8 150.61 109.58 389530 316690 340650 333400 331530 355310 368380 370360 453020 338570 327810 309910 338010 286360 351290 371780 341070 358800 359800 290130 349900 335870 346230 358140 371890 376450 451430 343210 342630 315310 345330 300710 356540 371450 326550 340860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 213750000 27734 2525 26055 52059 42005 42005 1 9606 Homo sapiens 0.011648241263856107 TTGFYSGFSEVAEK Unmodified 1521.6987 0.69873919 265 H0Y7Y8;H7C5R6;A0A024R3V1;Q4LE39-4;Q4LE39-3;Q4LE39-2;Q4LE39 ARID4B AT-rich interactive domain-containing protein 4B yes no 0 0 0 6.5 0.5 1 1 57.264 57.327 3 5.4435E-07 17017 20230619_1886_Aki_TMTPro18x_K_F6 134.68 112.45 34617 27479 34916 34662 27935 35065 33385 32545 34197 35102 42019 39554 43747 38065 38582 44378 42123 42626 32006 25220 35340 34423 29743 35360 33395 33504 35099 35476 42802 39931 44351 39638 39552 44383 40272 40503 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65460000 27735 265 26056 52060;52061 42006 42006 1 9606 Homo sapiens -0.041242233725597544 TTGIVETHFTFK Unmodified 1379.7085 0.70851601 1253;3415;3738;3385 P04899-4;P04899;Q96C71;P04899-2;B3KX51;P04899-6;P04899-3;P04899-5;B3KP24;Q93020;A0A142CHG9;P09471-2;P09471;Q8N6I9;B3KP89;H3BTM2;A0A1W2PP38;P08754;P63096;P63096-2;A0A3B3ITM0 GNAI2;WUGSC:H_LUCA16.1;GNAO1;GNAI3;GNAI1 Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(o) subunit alpha;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(i) subunit alpha-1 no no 0 0 0 3.67 3.09 1 1 1 51.752 51.771 3 3.3539E-07 15071 20230619_1880_Aki_TMTPro18x_K_F1 157.56 97.758 309180 266360 286600 321580 273400 314650 305910 316360 328640 295340 320410 318160 307480 275800 295600 292930 302110 355010 285810 244280 293030 320150 286050 318740 307370 322580 333070 300320 328580 320520 313740 286840 301160 297590 289360 336330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 264180000 27736 3385;1253;3415;3738 26057 52062;52063;52064 42007;42008;42009 42008 3 9606 Homo sapiens 0.03385009423459451 TTGIVMDSGD Oxidation (M) 1010.4226 0.42264068 3167 K7EM38 ACTG1 yes yes 0 1 0 1 0 1 42.586 42.586 2 0.0025551 11235 20230619_1880_Aki_TMTPro18x_K_F1 94.114 89.758 35947 31713 36210 39862 47233 45010 50849 43178 44760 47249 49427 42402 42093 34969 50210 42232 42569 42094 33257 29094 36950 39651 48198 45102 50851 44363 46143 47375 50150 43027 43559 36711 50449 42344 40801 39984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52795000 27737 3167 26058 52065 42010 42010 1839 1 9606 Homo sapiens -0.0821537342129659 TTGIVMDSGDGVTHTVPIYEGYALPHAILR Unmodified 3182.607 0.60703441 3112;3679 P63261;I3L4N8;Q8WVW5;A0A804GS07;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;I3L3I0;I3L1U9;A0A2R8YEA7;Q562L5;Q562Z7;Q562N0;Q562Y6;Q562S0;Q562X9;Q562N8;A0AUL6;Q562P0;Q562L9;Q562Y8;Q562N2;Q562M5;Q562M3;Q562R8;Q562Z6;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4DW52;E7EVS6;A0A2R8Y793 ACTG1;ACT;ACTB;PS1TP5BP1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 0 0 5.88 2.62 1 1 1 2 3 68.827 68.851 4 7.2058E-75 18728 20230619_1880_Aki_TMTPro18x_K_F1 287.14 277.36 178320 162100 191790 202530 176400 206330 203250 214700 205160 239990 207500 204590 243870 188810 191290 225100 218770 239690 165060 148670 193560 201280 185170 208520 203540 219390 209270 240010 214180 208720 245120 197320 197150 226240 209200 227420 6 8 9 9 9 9 9 9 9 9 8 9 9 8 9 8 9 8 1061499999.9999999 27738 3112;3679 26059 52066;52067;52068;52069;52070;52071;52072;52073 42011;42012;42013;42014;42015;42016;42017;42018;42019 42012 9 9606 Homo sapiens 0.10303517727061262 TTGIVMDSGDGVTHTVPIYEGYALPHAILR Oxidation (M) 3198.6019 0.60194904 3112;3679 P63261;I3L4N8;Q8WVW5;A0A804GS07;A0A6Q8PFE4;Q6PJ43;B3KWQ3;B7ZAP6;I3L3I0;I3L1U9;A0A2R8YEA7;Q562L5;Q562Z7;Q562N0;Q562Y6;Q562S0;Q562X9;Q562N8;A0AUL6;Q562P0;Q562L9;Q562Y8;Q562N2;Q562M5;Q562M3;Q562R8;Q562Z6;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4DW52;E7EVS6;A0A2R8Y793 ACTG1;ACT;ACTB;PS1TP5BP1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 1 0 6.57 1.99 1 1 2 3 65.354 65.389 4 1.3023000000000002E-62 17319 20230619_1886_Aki_TMTPro18x_K_F6 258.09 239.69 651970 545900 617170 752720 801800 763470 729650 762540 675230 812540 785630 705020 821720 699820 653270 802080 746140 815160 602680 501390 633260 742990 814910 771380 738470 780350 696390 814910 801800 720700 829390 727660 673220 804700 713470 773850 8 7 8 8 7 8 8 8 8 8 8 8 7 8 7 8 7 8 9333500000 27739 3112;3679 26059 52074;52075;52076;52077;52078;52079;52080 42020;42021;42022;42023;42024;42025;42026;42027 42021 1809 8 9606 Homo sapiens 0.09059213864475169 TTGLEEAAEAETAK Unmodified 1419.6729 0.67291837 421 A0A994J591;C9J2M4;P78362-2;P78362;A0A024R704;H7C5L6 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal yes no 0 0 0 1.5 0.5 1 1 50.021 50.049 3 5.2385E-05 14347 20230619_1880_Aki_TMTPro18x_K_F1 73.887 53.78 22902 18114 24615 22741 25004 28923 29403 24047 38586 32933 29838 30404 34366 29744 28799 35148 32694 33052 21186 16624 24862 22668 26078 28664 29654 25150 38436 32759 31222 30954 34677 30988 29632 35100 31246 31414 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45567000 27740 421 26060 52081;52082 42028 42028 1 9606 Homo sapiens -0.02013117614865223 TTGLVGLAVCNTPHER Unmodified 1723.8676 0.86755262 428 A0A024R745;H7BYD0;Q16718;F8WAS3;C9IZN5 NDUFA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes no 0 0 0 8 0 1 46.846 46.895 3 3.7205E-26 12224 20230619_1888_Aki_TMTPro18x_K_F8 236.43 224.82 50926 39386 48812 51880 40330 51155 48458 54046 60615 56578 54018 53225 64679 57801 58593 73620 64073 67965 47058 36168 49656 51358 42856 51826 48792 55069 60808 56958 56197 54386 65414 60294 60076 73365 61279 64599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216920000 27741 428 26061 52083 42029 42029 1 9606 Homo sapiens 0.03457354989268424 TTGQVVAMK Unmodified 933.49535 0.49535211 56 A0A024QZP7;Q5H9N4;P06493;I6L9I5;A0A024QZJ8;P06493-2;E5RIU6;B7Z3D6 CDC2;DKFZp686L20222;CDK1 Cyclin-dependent kinase 1 yes no 0 0 0 4.5 3.5 1 1 43.353 43.358 2;3 0.00017501 10859 20230619_1888_Aki_TMTPro18x_K_F8 145.17 101.93 90044 58300 91244 86317 107960 116140 95667 101660 121530 94366 115640 103370 110860 92774 98040 71600 131550 107270 83162 53649 92798 85236 110500 114810 98002 104620 122010 96102 118610 104160 112700 94997 101600 74390 125380 101600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 103480000 27742 56 26062 52084;52085 42030;42031 42031 2 9606 Homo sapiens 0.025944251627834092 TTGQVVAMK Oxidation (M) 949.49027 0.49026674 56 A0A024QZP7;Q5H9N4;P06493;I6L9I5;A0A024QZJ8;P06493-2;E5RIU6;B7Z3D6 CDC2;DKFZp686L20222;CDK1 Cyclin-dependent kinase 1 yes no 0 1 0 8 0 1 38.148 38.134 2 0.015043 8725 20230619_1888_Aki_TMTPro18x_K_F8 72.23 55.303 40131 26592 44853 42410 56323 60260 47521 54448 64728 50827 58486 47538 60611 50533 51113 39682 71732 51930 37100 24491 45323 41747 57363 59423 48976 55886 64684 51504 60304 48527 61355 51489 53202 40785 68296 49266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57251000 27743 56 26062 52086 42032 42032 28 1 9606 Homo sapiens 0.013501213001745782 TTGTPPDSSLVTYELHSRPEQDK Unmodified 2557.2296 0.22962518 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4H4;A0A7I2V4Y9;B3KTX4;A8K8J9;F8W1I6;H0YI98;A0A7I2V390;F8VW18;A0A7I2V5R4 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 0 1 4.5 0.5 1 1 47.143 47.202 4 9.897399999999999E-26 12571 20230619_1885_Aki_TMTPro18x_K_F5 179.42 151 132660 112090 128830 147070 129120 139900 127720 134840 129320 183240 172740 176100 179450 158340 152780 176520 176240 202100 122670 102900 131280 145520 134020 141910 129020 139400 133670 182260 175490 178410 181700 164910 157260 178450 168580 191590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 384380000 27744 1406 26063 52087;52088 42033;42034 42034 2 9606 Homo sapiens 0.013299555716002942 TTGVVLDSGDGVTHAVPIYEGFAMPHSIMR 2 Oxidation (M) 3188.5271 0.52706953 1483;3577 A0A384NQ21;P61163;R4GMT0;A0A1B0GVS3;B4DXP9;P42025;Q13841 ACTR1A;ACTR1B Alpha-centractin;Beta-centractin no no 0 2 0 7 0 1 55.612 55.673 4 4.1828E-10 16022 20230619_1887_Aki_TMTPro18x_K_F7 102.57 95.292 20591 18115 19463 18413 20384 22737 22056 20891 23639 23836 29400 25132 26583 21215 27268 31006 24832 30399 19040 16587 19874 18642 21149 22630 22196 21548 24214 23971 29745 25356 27235 22536 27606 30953 23821 28859 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39949000 27745 1483;3577 26064 52089 42035 42035 984;985 1 9606 Homo sapiens 0.020347080615920277 TTGYSDRPTAR Unmodified 1223.5895 0.58946351 306 B7Z6L2;A0A024R4U0;Q9NP61;B7Z4Q0;Q9NP61-2 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes no 0 0 1 5.5 0.5 1 1 27.781 27.833 3 0.00043984 5021 20230619_1886_Aki_TMTPro18x_K_F6 88.155 63.773 13926 8903.4 15283 15493 20304 23069 18678 22250 25657 18478 25218 25912 27149 23796 26399 16063 31994 29963 12870 8210.9 15491 15195 20662 22717 19148 22670 25696 19117 25985 25884 27621 24223 27104 17080 30543 28319 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 36738000 27746 306 26065 52090;52091 42036;42037 42037 2 9606 Homo sapiens -0.013387644813747102 TTHFVEGGDAGNR Unmodified 1359.6167 0.61674089 3473;3341 P18124;A0A024R814;A8MUD9;O95036 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 no no 0 0 0 3 0 1 31.709 31.787 3 5.6048E-08 6306 20230619_1882_Aki_TMTPro18x_K_F3 156 138.42 31986 16618 27480 29874 33384 35826 33083 37418 47779 38777 45977 44063 42162 40323 35708 46375 50567 49186 29474 15349 28392 29139 34232 35790 33833 38133 47731 39296 47061 44388 42893 42018 37303 46632 48229 46692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55910000 27747 3473;3341 26066 52092 42038 42038 1 9606 Homo sapiens -0.04868280940991099 TTHFVEGGDAGNREDQINR Unmodified 2114.973 0.97295699 3473;3341 P18124;A0A024R814;A8MUD9;O95036 RPL7;WUGSC:H_RG054D04.1 60S ribosomal protein L7 no no 0 0 1 4 1.73 2 2 1 1 1 1 33.962 34.026 3;4 8.542999999999999E-32 7150 20230619_1882_Aki_TMTPro18x_K_F3 241.32 222.54 102180 39871 85274 97494 101110 91507 102500 101990 112990 113920 121240 118730 137220 108360 93891 135700 122010 127040 94049 37092 88317 93539 103700 93176 103600 103800 114890 114620 124630 120020 137440 113580 98023 135320 116510 120730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6210199999.999999 27748 3473;3341 26067 52093;52094;52095;52096;52097;52098;52099;52100 42039;42040;42041 42040 3 9606 Homo sapiens -0.039930573514084244 TTHLIAK Unmodified 782.46504 0.46503826 1088 A0A0S2Z489;O00232-2;O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 1.5 0.5 1 1 37.18 37.21 3 0.0051399 8597 20230619_1881_Aki_TMTPro18x_K_F2 107.59 87.957 310270 142760 275250 316090 368060 366610 347910 358870 462200 390110 427320 421260 419810 368640 330930 318480 486090 422400 285840 132400 284120 305270 374390 366480 355420 367920 462820 393690 439540 424210 424700 379470 346510 326770 463140 400330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 235770000 27749 1088 26068 52101;52102 42042;42043 42043 2 9606 Homo sapiens 0.0651043455989111 TTHQDEEVFK Unmodified 1232.5673 0.56733108 2652 B4E2Y2;O95155-3;O95155-2;O95155;O95155-4 UBE4B Ubiquitin conjugation factor E4 B yes no 0 0 0 2 0.816 1 1 1 38.493 38.533 3 2.4555E-06 9186 20230619_1881_Aki_TMTPro18x_K_F2 145.91 120.26 41147 14337 34015 42573 46398 46658 41012 41218 53269 41280 51400 48048 51212 46308 40821 52202 53461 58607 37857 13406 35376 40652 47074 46700 42037 42497 53457 41958 52775 48449 51810 48132 42455 52687 51065 55579 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64731000 27750 2652 26069 52103;52104;52105 42044 42044 1 9606 Homo sapiens -0.039649889498150515 TTIAQQVK Unmodified 887.50763 0.50763136 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;A0A994J5C5;A0A994J855;A0A994J5Y2;Q96D47;D3DXJ4;I3L2G1;A0A0J9YXN6 NSF Vesicle-fusing ATPase yes no 0 0 0 8 0 2 41.431 41.428 2;3 0.0066752 10085 20230619_1888_Aki_TMTPro18x_K_F8 109.86 59.823 46513 32548 56624 51764 65325 81512 71461 75091 96511 37443 44573 44940 39629 50901 56536 41486 49912 48831 43048 29968 56806 51070 67414 79944 72427 76112 94615 40220 47998 45520 41547 51739 56742 42313 47812 46306 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37219000 27751 1435 26070 52106;52107 42045;42046 42046 2 9606 Homo sapiens 0.05937784897480469 TTIENIQLPHTLLSR Unmodified 1734.9628 0.96283322 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57;A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 2 0 1 55.696 55.717 3 8.166000000000001E-20 16888 20230619_1881_Aki_TMTPro18x_K_F2 217.01 193.33 94148 64308 61334 98500 73983 93284 72637 67573 73954 68406 78331 82790 87403 84784 57220 100480 97290 113810 86715 59188 65451 96464 75986 94072 73355 70923 75440 69577 80555 83517 87596 88189 61173 101320 92813 107890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1388500000 27752 471 26071 52108 42047 42047 1 9606 Homo sapiens 0.1247503145200426 TTIFSPEGR Unmodified 1006.5084 0.50835964 3505 P25789;H0YMZ1;H0YL69;B2RDG0;H0YMA1;H0YMI6;H0YLC2;H0YLS6 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type yes no 0 0 0 6.5 0.5 1 1 45.303 45.389 2 0.0025813 11811 20230619_1886_Aki_TMTPro18x_K_F6 105.1 68.341 424670 710010 407560 397890 399280 578840 442310 402290 1082100 475850 410110 472870 558140 468700 453740 526870 522800 512780 395110 646600 415430 430890 419070 568330 462420 425170 1037500 478700 458960 479820 560360 486720 467420 527570 499480 487230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 420520000 27753 3505 26072 52109;52110 42048;42049 42048 2 9606 Homo sapiens 0.00536579546530902 TTIFTDAK Unmodified 895.4651 0.46509784 1399 A0A8I5KUS5;A0A384MDL3;Q15370;Q15370-2;B8ZZU8;I3L0M9;A0A0B4J296 TCEB2 Transcription elongation factor B polypeptide 2 yes no 0 0 0 7 0.816 2 2 2 49.528 49.608 2;3 4.5711E-09 13359 20230619_1888_Aki_TMTPro18x_K_F8 169.57 108.78 949690 725950 827730 924070 901300 1019000 1003600 951640 1193700 1181100 1288100 1162700 1280700 1073200 1068800 1366400 1404000 1310500 876860 666430 852740 918040 933830 1021600 1011800 983100 1209100 1181000 1315700 1179000 1297400 1125500 1110700 1364400 1339500 1245700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 917880000 27754 1399 26073 52111;52112;52113;52114;52115;52116 42050;42051;42052 42052 3 9606 Homo sapiens 0.01318389769244277 TTIIECLK Unmodified 976.52632 0.52631789 4309 Q92878-2;Q92878;A0A494C1B7;Q32P42;A8K3I2;E7EN38;A0A494C122;E7ESD9;A0A494BZX5;A5D6Y3;E9PM98 RAD50 DNA repair protein RAD50 yes no 0 0 0 8 0 1 54.431 54.497 3 0.0015182 15482 20230619_1888_Aki_TMTPro18x_K_F8 103.74 74.266 55653 50533 55653 56390 54263 70653 63861 59227 71589 71675 70259 70864 79218 62940 64083 83589 77023 81310 51496 46301 56536 56665 56818 70088 64068 61633 72464 71760 72534 71725 79828 66300 66254 83478 73600 77237 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54347000 27755 4309 26074 52117 42053 42053 1 9606 Homo sapiens 0.03711578477009425 TTIIEGR Unmodified 788.43922 0.43921744 4047 Q5QPA5;Q9NVS2-3;Q9NVS2;Q9NVS2-2 MRPS18A 28S ribosomal protein S18a, mitochondrial yes no 0 0 0 5 0 1 37.61 37.703 2 0.061305 8558 20230619_1885_Aki_TMTPro18x_K_F5 81.119 53.012 48932 35062 47801 56080 71160 68168 62088 66606 78081 58978 73574 67428 69912 63872 66180 60162 81642 70858 45202 32282 49043 55027 71766 67971 63616 67930 78393 60312 75494 67975 71337 65800 68174 61146 77891 67228 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42093000 27756 4047 26075 52118 42054 42054 1 9606 Homo sapiens 0.03653540317623083 TTINNEYNYR Unmodified 1286.5891 0.58912916 2739 P08069;C9J5X1;H0YMJ5 IGF1R Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain;Tyrosine-protein kinase receptor yes no 0 0 0 5 0 1 39.093 39.184 2 0.00038696 9179 20230619_1885_Aki_TMTPro18x_K_F5 128.27 110.41 29237 21508 26068 26291 33825 29715 27198 24810 30490 36867 45174 39603 42807 36382 34779 49580 54875 46630 26994 19740 26848 26203 34294 29703 27922 26016 31484 36693 45503 40015 43399 38327 36695 49399 52253 44351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30711000 27757 2739 26076 52119 42055 42055 1 9606 Homo sapiens -0.042701842012547786 TTISVAHLLAAR Unmodified 1251.7299 0.72992016 3120 I6L9E8;Q8NCA5;A0A8I5KR56;A0A8I5QKV5;A0A8I5KZA5;E9PH82;B4DY25;B4DT23;B3KTW4 FAM98A Protein FAM98A yes no 0 0 0 5 0 1 50.647 50.723 3 7.2842E-05 14053 20230619_1885_Aki_TMTPro18x_K_F5 114.71 89.855 23146 21431 31438 26447 27475 31880 25393 25948 35616 26128 35487 35609 38589 34310 35125 39697 41069 37716 21484 19654 31153 26376 28806 31686 26062 26930 35660 26717 36549 35705 39138 35700 36130 39685 39213 35856 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153430000 27758 3120 26077 52120 42056 42056 1 9606 Homo sapiens 0.11412439242872097 TTITMAHLLAAR Oxidation (M) 1313.7126 0.71255553 3982 Q52LJ0;Q52LJ0-1 FAM98B Protein FAM98B yes no 0 1 0 3 0 1 41.622 41.684 3 3.8884E-06 10326 20230619_1882_Aki_TMTPro18x_K_F3 140.78 123.61 37810 30072 31278 37410 43236 43611 39344 44375 56455 22290 28608 27717 24462 20913 29383 30219 30651 24212 34905 27596 32527 37254 43875 43649 40405 44680 55313 23933 30482 27703 25351 22271 29865 29882 29270 23084 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38637000 27759 3982 26078 52121 42057 42057 2634 1 9606 Homo sapiens 0.068247756455321 TTITMAHLLAAR Unmodified 1297.7176 0.71764091 3982 Q52LJ0;Q52LJ0-1 FAM98B Protein FAM98B yes no 0 0 0 5.5 0.5 1 1 50.351 50.427 3 6.677E-18 13914 20230619_1885_Aki_TMTPro18x_K_F5 223.96 191.46 137380 111120 122300 120420 128890 136420 135220 150260 182540 68410 56620 53462 61425 54125 105290 60208 80503 48905 126910 101830 125570 121150 133600 137080 137390 150310 177930 73265 64308 55045 64689 56121 104660 59933 77045 46686 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228360000 27760 3982 26078 52122;52123 42058 42058 1 9606 Homo sapiens 0.08069079508163668 TTIVICCSPSSYNESETK Unmodified 2074.9187 0.91872108 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;Q6P164;Q66K46;Q2TA90 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 5.5 0.5 1 1 50.991 51.067 3 2.2989000000000002E-30 14338 20230619_1886_Aki_TMTPro18x_K_F6 227.67 218.85 53289 45124 46248 52818 38840 45204 49415 47915 48139 72832 63676 55236 75991 55816 57972 78481 58836 68896 49232 41374 47496 52618 41237 46364 49199 49435 49859 71692 65069 56927 76233 58803 59434 77900 56355 65502 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207640000 27761 2727 26079 52124;52125 42059 42059 1 9606 Homo sapiens -0.07574153609493806 TTIYEIQDDR Unmodified 1252.5935 0.59354583 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8;H3BR88 IFI16 Gamma-interferon-inducible protein 16 yes no 0 0 0 2 0.816 1 1 1 45.796 45.848 2 1.3214E-06 12512 20230619_1881_Aki_TMTPro18x_K_F2 174.98 150.83 178910 127010 155240 215070 393790 532160 446640 395660 516460 420960 383210 431500 488480 367710 353240 531040 455510 478480 165110 117030 163980 213710 392400 510380 448680 414010 516830 424740 404260 435470 488630 390190 368210 527510 435000 454940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 527290000 27762 2829 26080 52126;52127;52128 42060;42061;42062 42061 3 9606 Homo sapiens -0.022647197783498996 TTKPYPADIVVQFK Unmodified 1605.8766 0.87664397 120 A0A024R104;Q12860-2;Q12860;Q12860-3 CNTN1 Contactin-1 yes no 0 0 1 3 0 1 57.491 57.523 4 0.00078598 17445 20230619_1882_Aki_TMTPro18x_K_F3 92.468 69.589 37940 36928 39139 37380 21490 18384 21839 22279 28121 35797 41403 36742 32232 32326 43613 34826 34529 30903 35133 33799 39358 37503 23697 20173 22255 22889 28835 35466 41439 37109 33743 33592 43598 34775 33099 29407 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23677000 27763 120 26081 52129 42063 42063 1 9606 Homo sapiens 0.09794071617216105 TTLLAGDIEHPR Unmodified 1321.699 0.69901396 3809 Q07954 LRP1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes yes 0 0 0 4.5 0.5 1 1 44.234 44.295 3 0.00042129 11439 20230619_1883_Aki_TMTPro18x_K_F4 81.709 65.485 35961 33965 36999 41988 48542 45169 41412 41356 48821 37040 39296 40551 47179 32515 44471 46994 50060 44106 33292 31147 37689 41779 49255 45371 42395 42407 48926 37793 41127 40758 47732 34599 45587 46821 47802 41945 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39051000 27764 3809 26082 52130;52131 42064 42064 1 9606 Homo sapiens 0.051032411379537734 TTLLHMLK Unmodified 955.55247 0.55247306 4052;3991 Q5SQT9;Q9NR31;Q8NG23;Q6FID4;B2R679;Q5SQT8;X1WI22;D6RAA2;D6RDB2;Q53F37;Q9Y6B6;D6RD69 SAR1A;SARA1;SAR1B GTP-binding protein SAR1a;GTP-binding protein SAR1b no no 0 0 0 4 0 1 53.094 53.114 3 0.00093663 15406 20230619_1883_Aki_TMTPro18x_K_F4 111.95 79.726 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27765 4052;3991 26083 52132 42065 42065 1 9606 Homo sapiens 0.07291892439161529 TTLTAAITK Unmodified 918.5386 0.53859714 1417 P49411;A0A384ME17;H3BNU3 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 1.5 0.5 1 1 49.267 49.297 2 4.5931E-08 14085 20230619_1881_Aki_TMTPro18x_K_F2 200.54 135.5 530910 469670 464650 480530 670340 808440 657050 679190 919380 139770 131740 96483 121590 88533 313490 161590 172700 78887 490660 430050 480880 488840 680820 789430 670540 688040 887810 170450 171940 100370 133770 95417 306750 157090 165950 76148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 637770000 27766 1417 26084 52133;52134 42066 42066 1 9606 Homo sapiens 0.07606938211699799 TTLVDSR Unmodified 790.41848 0.418482 3165 K7ELV2;Q96EE3;Q96EE3-1;K7EP88;K7ENI5 SEH1L Nucleoporin SEH1 yes no 0 0 0 3.5 0.5 1 1 35.449 35.501 2 0.033749 7735 20230619_1883_Aki_TMTPro18x_K_F4 93.561 35.393 64290 50954 83729 77453 100610 102070 80669 85854 83479 74667 97543 86486 88417 70849 89608 57061 94541 84474 59584 46864 83632 76336 102500 100960 82647 88510 85418 76431 98956 86730 90539 72930 91180 59214 90339 79981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60763000 27767 3165 26085 52135;52136 42067 42067 1 9606 Homo sapiens 0.014889499379592053 TTMRPQSFYDGSHSCAR Unmodified 1999.8629 0.86287795 1161;3805 Q13126-2;Q13126-3;B4DUC8;A0A384ME80;Q13126;Q13126-4;A0A140CZL4;J3QSB7;Q6FHT1;Q6FHP1;A0A140CZL5;Q13126-7;Q13126-6;Q13126-5;A0A140CZL6;Q05DJ2 MTAP S-methyl-5'-thioadenosine phosphorylase;Purine nucleoside phosphorylase no no 0 0 1 2 0 1 36.161 36.219 4 7.2489E-49 8138 20230619_1881_Aki_TMTPro18x_K_F2 290.16 270.49 27371 21739 31747 29886 24219 31205 27925 29501 30953 31805 32864 33213 35873 26121 32050 36819 40567 44754 25339 19970 31764 29531 25877 31399 28062 30319 31447 32055 33762 33422 36314 27781 33155 37249 38761 42408 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57054000 27768 1161;3805 26086 52137 42068 42068 1 9606 Homo sapiens -0.09705897215781079 TTMRPQSFYDGSHSCAR Oxidation (M) 2015.8578 0.85779257 1161;3805 Q13126-2;Q13126-3;B4DUC8;A0A384ME80;Q13126;Q13126-4;A0A140CZL4;J3QSB7;Q6FHT1;Q6FHP1;A0A140CZL5;Q13126-7;Q13126-6;Q13126-5;A0A140CZL6;Q05DJ2 MTAP S-methyl-5'-thioadenosine phosphorylase;Purine nucleoside phosphorylase no no 0 1 1 8 0 1 31.716 31.721 4 0.001675 6197 20230619_1888_Aki_TMTPro18x_K_F8 75.564 72.915 8604.2 7175.1 6784.8 10984 10895 11747 11700 10745 13363 8032 8656.3 9742.3 7188 6369.2 9635.1 9743.5 9388.1 9596 7943.1 6598.4 7133 10777 11016 11793 11789 10980 13313 8322.9 9051.7 9700 7504.1 6856.4 9742 9728 8986.3 9115.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37511000 27769 1161;3805 26086 52138 42069 42069 714 1 9606 Homo sapiens -0.1095020107838991 TTNFAGILSQGLR Unmodified 1376.7412 0.74121312 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 4.5 0.5 1 1 60.718 60.745 2 1.578E-10 18177 20230619_1885_Aki_TMTPro18x_K_F5 182.07 133.98 675740 608300 672540 768020 750580 849150 725810 756930 827100 500370 488560 379220 427270 351790 671280 487320 490220 379600 625210 558040 685180 763360 773060 850250 736380 772820 822480 516390 514340 390250 449560 370960 667260 482150 470020 362090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 850060000 27770 261 26087 52139;52140 42070;42071 42071 2 9606 Homo sapiens 0.06791216546321266 TTNSSWVVVFK Unmodified 1266.6608 0.66083754 348 B5BU72;A0A024R5L7;A8K5U9;A0A024R5P1;Q13492-3;Q13492-2;Q13492-5;Q13492;Q13492-4;E9PI56;E9PKP6;E9PLJ8;E9PK13 PICALM Phosphatidylinositol-binding clathrin assembly protein yes no 0 0 0 4 0 1 61.258 61.261 3 0.00046026 18827 20230619_1883_Aki_TMTPro18x_K_F4 96.103 79.077 64264 57939 65226 57907 55465 63876 59050 64550 69991 75589 68330 64826 72136 54338 67620 75036 71921 68201 59468 53038 65981 58624 58514 64184 59720 66162 70676 75453 70330 65950 73242 57527 69117 74668 68747 64864 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58658000 27771 348 26088 52141 42072 42072 1 9606 Homo sapiens 0.038173552232592556 TTNYSTVPQK Unmodified 1137.5666 0.5666028 3006 Q6PJT7;Q6PJT7-5;G3V256;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-10;Q6PJT7-11;Q6PJT7-4;H0YJA2;A0A024R6F2;G3V5I6;A0A087WTC9 ZC3H14;FLJ11806 Zinc finger CCCH domain-containing protein 14 yes no 0 0 0 8 0 1 40.934 40.926 3 0.0004922 9876 20230619_1888_Aki_TMTPro18x_K_F8 102.52 88.366 25472 17801 29985 31073 35381 46444 38222 36896 42909 35312 45218 49534 46104 39606 41019 31124 46374 48088 23566 16411 30188 30460 36446 45532 38514 38311 43503 36224 46351 49266 46784 40748 42038 32401 44331 45489 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40139000 27772 3006 26089 52142 42073 42073 1 9606 Homo sapiens 0.0033221640117062634 TTPDVIFVFGFR Unmodified 1397.7343 0.73433683 1364 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4;A0A2R8Y8A0 RPS24 40S ribosomal protein S24 yes no 0 0 0 4 0 1 64.57 64.579 2 0.047032 20266 20230619_1883_Aki_TMTPro18x_K_F4 64.692 47.306 53170 33724 47620 50239 35558 46831 52098 48152 56309 55280 47864 59770 64029 61365 52385 62397 56861 64186 49054 31040 48682 49322 38404 47609 51699 49318 56815 55635 50297 60484 64335 63271 53777 62767 54411 60919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19137000 27773 1364 26090 52143 42074 42074 1 9606 Homo sapiens 0.05137903665718113 TTPGTLAR Unmodified 815.45012 0.45011648 395 A0A024R6H0;Q9P2I0;B3KMI0;B3KN45 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes no 0 0 0 5.5 1.71 1 1 1 1 1 1 33.301 33.356 2 0.07085 6963 20230619_1886_Aki_TMTPro18x_K_F6 68.081 23.634 97972 54152 123330 123720 156410 154820 127240 149360 133780 95523 153330 172440 132410 135230 146880 75179 180740 154230 90602 50197 123640 119510 158850 153960 130310 151490 136510 101780 155660 170170 136670 137500 150550 81202 172420 145750 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 49102000 27774 395 26091 52144;52145;52146;52147;52148;52149 42075 42075 1 9606 Homo sapiens 0.03500942691891851 TTPNSGDVQVTEDAVR Unmodified 1687.8013 0.80130678 3547 Q6IBK5;P35269;B4DXY2;M0QXD6 GTF2F1 General transcription factor IIF subunit 1 yes no 0 0 0 2 0 1 42.1 42.179 2 1.0433E-07 10835 20230619_1881_Aki_TMTPro18x_K_F2 161.21 124.62 14068 10281 11823 15465 12502 16270 16731 14356 18911 18455 21035 20444 20296 15938 16364 21016 23316 24565 12983 9457.6 12235 15190 13071 16336 16683 14919 19218 18494 21440 20516 20548 16869 17119 21219 22250 23290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47982000 27775 3547 26092 52150 42076 42076 1 9606 Homo sapiens -0.015081823717764564 TTPNSGDVQVTEDAVRR Unmodified 1843.9024 0.90241781 3547 Q6IBK5;P35269;B4DXY2;M0QXD6 GTF2F1 General transcription factor IIF subunit 1 yes no 0 0 1 3 0 1 38.825 38.879 3 4.0389E-09 9145 20230619_1882_Aki_TMTPro18x_K_F3 127.29 108.01 19649 15859 17056 19097 22820 22978 20865 20695 29815 20479 32620 29440 25873 24888 23728 23151 29580 29310 18147 14547 17638 19069 23201 22895 21425 21299 29922 21004 33009 29340 26540 25720 24486 23643 28243 27774 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51092000 27776 3547 26093 52151 42077 42077 1 9606 Homo sapiens 0.014222693309193346 TTPPSVFFPVFVR Unmodified 1492.8078 0.80783613 2731 F8W1F5;C9IZY8;Q8IVF7-2;Q8IVF7-3;Q8IVF7;Q96PY5;Q96PY5-3;B3KT32;Q8N4Y7;Q9NSL0;Q6ZN96;B3KXD8 FMNL3;FMNL2;DKFZp762B245 Formin-like protein 3;Formin-like protein 2 yes no 0 0 0 6 0 1 63.917 63.964 3 0.0042485 19897 20230619_1886_Aki_TMTPro18x_K_F6 56.414 44.248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27777 2731 26094 52152 42078 42078 1 9606 Homo sapiens 0.08114452108202386 TTPQSEMGGYYCNVCDCVVK Oxidation (M) 2382.9589 0.95888811 4385 R4GNG8;Q96NC0 ZMAT2 Zinc finger matrin-type protein 2 yes no 0 1 0 6 0 1 50.169 50.246 3 1.2259E-08 14020 20230619_1886_Aki_TMTPro18x_K_F6 118.15 114.88 11184 9385.8 12152 14706 11953 13462 12038 12390 12462 14116 16368 15983 15794 16284 11772 20500 18460 19319 10351 8633.7 12275 14387 12432 13677 12155 12784 12832 14231 16576 16166 15972 16994 12460 20440 17604 18358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33048000 27778 4385 26095 52153 42079 42079 2754 1 9606 Homo sapiens -0.17727298272802727 TTPQSEMGGYYCNVCDCVVK Unmodified 2366.964 0.96397348 4385 R4GNG8;Q96NC0 ZMAT2 Zinc finger matrin-type protein 2 yes no 0 0 0 6.5 0.5 1 1 54.632 54.703 3 8.8915E-17 15925 20230619_1886_Aki_TMTPro18x_K_F6 166.57 159.54 21256 19114 19502 21001 16947 21130 19863 18893 21036 25229 23619 24215 28797 26841 23831 31714 29864 31271 19653 17512 19929 21061 17906 21309 19903 19632 21495 25129 24341 24725 29012 27850 24697 31743 28525 29701 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146940000 27779 4385 26095 52154;52155 42080 42080 1 9606 Homo sapiens -0.16482994410216634 TTPSVVAFTADGER Unmodified 1449.71 0.70997257 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2V2S7;A0A7I2V3F7;B7Z1V7;H0Y8K0;A0A3B3ITI4 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 4.5 1.12 1 1 1 1 49.654 49.721 3 1.9687E-22 13811 20230619_1883_Aki_TMTPro18x_K_F4 192.14 176.25 249000 201500 219770 229340 243730 221240 229670 245110 313820 281640 287610 246540 289320 259820 268340 321260 282150 290750 230000 184730 226010 229330 250740 225080 235050 249670 313870 281710 296090 252580 294340 270760 274300 320000 269880 276450 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2699400000 27780 1488 26096 52156;52157;52158;52159 42081;42082;42083 42082 3 9606 Homo sapiens 0.0031059872155765333 TTPSYVAFTDTER Unmodified 1486.694 0.69398816 3430;1031;2926;1463 P11142;V9HW22;E9PKE3;Q53GZ6;B3KTV0;E9PNE6;P11142-2;Q53HF2;B4DTX2;E9PLF4;P54652;A0A024R6B5;E9PQK7;E9PQQ4;A0A384MDT7;E9PPY6;E9PN25;E9PI65;B3KUS2;P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;Q59EJ3;B4DI39;B4DWK5;B4DNX1;B4E1T6;B4DNV4;Q53FC7;B3KSM6;B2R6X5;A0A384NKX5;P17066;P48741;E9PK54 HSPA8;HEL-S-72p;HSPA2;HSPA1A;HSPA1B;HEL-S-103;HSPA6;HSPA7 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 no no 0 0 0 5 1.41 1 1 1 1 1 49.055 49.123 2 1.9453E-27 13527 20230619_1883_Aki_TMTPro18x_K_F4 248.14 228.35 2098700 1800000 1906300 2151600 1848600 2276700 2139000 2121600 2368000 2780500 2621100 2494800 3025700 2390100 2317900 3328100 2640600 2775600 1939700 1650700 1953400 2145600 1935000 2288900 2147500 2195700 2412200 2765700 2693500 2543500 3040300 2518800 2392900 3295400 2524300 2641600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 11372000000 27781 3430;1031;1463;2926 26097 52160;52161;52162;52163;52164 42084;42085;42086;42087;42088 42085 5 9606 Homo sapiens -0.029891075153727797 TTPTFFPK Unmodified 937.49092 0.49091866 532 A0A024R8Q1;P10253;I3L0S5;I3L3L3;B7Z5V6 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase yes no 0 0 0 2.5 0.5 1 1 53.462 53.502 2 0.0020058 15689 20230619_1882_Aki_TMTPro18x_K_F3 133.6 81.813 173430 157140 155940 179380 183340 207710 240530 220520 274380 119040 123420 104490 121010 103800 169240 128730 130930 117250 160340 144010 160490 179740 189890 208160 239990 221720 271020 125590 133630 106920 125920 108420 168900 128460 125540 111530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253960000 27782 532 26098 52165;52166 42089 42089 1 9606 Homo sapiens 0.019672840115163126 TTPTGWTLDQCIQTGVDNPGHPFIK Unmodified 2782.3385 0.33846413 3442 P12532;P12532-2;F8WCN3;B4DH34;E9PCP8;B4DFE8;B4DGR9;C9JSQ1;B4DF55;C9J6W7;C9JJX8;B4DKA2;C9J8F6;C9J995;C9JT96;B4DEL4;B4DFA3 CKMT1A;CKMT1B Creatine kinase U-type, mitochondrial yes no 0 0 0 3.33 3.3 2 1 60.629 60.64 3;4 1.0706999999999999E-19 18013 20230619_1888_Aki_TMTPro18x_K_F8 156.74 137.7 91504 77518 88862 89783 51692 59553 76649 78497 78137 100520 106980 112450 102450 93648 102160 111800 116640 130520 84610 71068 89926 89326 57317 62980 75980 79521 80723 100700 108260 112960 104730 98176 104750 113070 111560 123720 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 192440000 27783 3442 26099 52167;52168;52169 42090;42091;42092 42092 3 9606 Homo sapiens 0.0185884327020176 TTPYQIACGISQGLADNTVIAK Unmodified 2320.1733 0.17329628 2326 P26639;Q53GX7;B2RDX5;Q5M7Z9;D6R9F8 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 3 0 1 63.472 63.503 3 1.446E-37 19884 20230619_1882_Aki_TMTPro18x_K_F3 224.59 212.4 146200 115190 137120 139530 102310 116250 130020 108740 122610 169880 182630 186030 185180 161040 180740 210190 174840 189860 135090 105680 139520 138630 109770 119190 129340 113380 127880 168830 184720 187300 188680 169470 183710 209210 167450 180490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 310430000 27784 2326 26100 52170 42093 42093 1 9606 Homo sapiens 0.06601656201200967 TTQEEQLR Unmodified 1003.4934 0.49343786 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 1 0 1 31.54 31.54 2 5.6556E-05 6594 20230619_1880_Aki_TMTPro18x_K_F1 194.92 104.62 37138 19952 48152 48795 74838 85195 53159 73085 60480 40879 68454 78892 58472 60250 67214 24608 80073 72022 34351 18522 48403 47316 75042 83020 55145 74566 61432 44210 69512 77649 60484 60877 68655 28106 76433 67934 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55470000 27785 3440 26101 52171 42094 42094 1 9606 Homo sapiens -0.008169123214656793 TTQFSCTLGEK Unmodified 1270.5864 0.58635197 2888 E7DVW5;Q01469;I6L8B7 FABP5 Fatty acid-binding protein, epidermal yes no 0 0 0 7 0.816 2 2 2 47.841 47.916 2;3 2.3674E-06 12642 20230619_1888_Aki_TMTPro18x_K_F8 186.46 150.13 811670 687780 699510 867030 775970 1057800 940220 910370 1171200 1231200 1258300 1159100 1547800 1352300 917410 1641900 1506500 1365200 749840 631080 722460 862980 806550 1051300 945380 948680 1184100 1225500 1298000 1187700 1541400 1403400 980430 1627700 1434700 1300100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5424800000 27786 2888 26102 52172;52173;52174;52175;52176;52177 42095;42096;42097 42097 3 9606 Homo sapiens -0.03811775650410709 TTQFSCTLGEKFEETTADGR Unmodified 2277.0219 0.021940594 2888 E7DVW5;Q01469;I6L8B7 FABP5 Fatty acid-binding protein, epidermal yes no 0 0 1 5 1.41 1 1 1 1 1 56.081 56.13 3 1.064E-37 16460 20230619_1886_Aki_TMTPro18x_K_F6 241.76 230.13 581210 528000 605320 638800 562180 489900 660150 594440 460480 740820 680950 445820 536480 420490 679700 420540 381610 256830 537980 484150 612300 634300 588230 509620 654090 604200 490330 731100 680800 465220 558090 434770 670740 414500 367140 246130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1083500000 27787 2888 26103 52178;52179;52180;52181;52182 42098;42099;42100 42099 3 9606 Homo sapiens -0.06548949897296552 TTQIPQWCVEYMR Unmodified 1710.7858 0.78579683 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 1.5 0.5 1 1 57.672 57.68 3 9.2944E-08 17541 20230619_1880_Aki_TMTPro18x_K_F1 146.79 127.18 80143 65435 76325 78801 74040 83089 80675 87558 92926 95371 103630 95969 111320 89771 82449 111280 106880 116250 74076 60021 77830 78561 77297 83801 81386 89325 94421 95973 106060 97252 111980 93982 85859 111670 102090 110330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 230830000 27788 3246 26104 52183;52184 42101;42102 42101 2 9606 Homo sapiens -0.04116463694185768 TTQIPQWCVEYMR Oxidation (M) 1726.7807 0.78071145 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 1 0 8 0 1 53.388 53.463 2 0.051981 15040 20230619_1888_Aki_TMTPro18x_K_F8 59.198 48.047 24122 24849 22315 22595 24224 25285 26531 24119 21100 27352 27777 28948 31227 24287 27299 31678 30087 29066 22327 22721 22848 23062 25046 25362 26454 24814 22103 27501 28349 29159 31557 25602 28006 31557 28753 27639 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41929000 27789 3246 26104 52185 42103 42103 1916 1 9606 Homo sapiens -0.05360767556794599 TTQLGPGR Unmodified 828.44537 0.44536545 4656 Q9UBS4;B3KW63 DNAJB11 DnaJ homolog subfamily B member 11 yes no 0 0 0 6 0.816 1 1 1 32.505 32.576 2 0.0018696 6327 20230619_1887_Aki_TMTPro18x_K_F7 135.77 70.963 68620 43481 94648 94278 120800 132090 98366 117500 108940 71436 101330 106700 79332 74580 111490 44134 107870 84225 63561 40240 94367 91432 122730 130250 100880 119750 109930 75767 103460 105550 83236 76381 112220 47322 103080 79659 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57364000 27790 4656 26105 52186;52187;52188 42104;42105 42105 2 9606 Homo sapiens 0.024280585491396778 TTQVPQFILDDFIQNDR Unmodified 2049.0167 0.016719282 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 6.2 0.748 1 2 2 64.316 64.356 2;3 6.9853E-38 20074 20230619_1886_Aki_TMTPro18x_K_F6 314.52 280.56 246990 217300 241130 273710 241970 287980 245580 270100 307620 313520 294730 294710 330470 305910 285970 367720 315370 304450 228450 199360 245640 271930 251640 289670 249450 278270 309550 314020 304540 300520 334230 318260 293650 364790 301380 289880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2609800000 27791 3811 26106 52189;52190;52191;52192;52193 42106;42107;42108 42107 3 9606 Homo sapiens 0.03417159093078226 TTSAGTGGMWR Oxidation (M) 1139.503 0.50295669 3675 P60468 SEC61B Protein transport protein Sec61 subunit beta yes yes 0 1 0 7 0.816 1 1 1 34.797 34.838 2 0.0066511 7393 20230619_1888_Aki_TMTPro18x_K_F8 76.572 70.259 64526 51003 57534 62081 80627 84864 78053 78762 96716 72845 78590 71077 85970 60628 75077 71521 86279 71514 59599 46794 59404 62081 81861 83950 79391 80696 96692 73932 81751 71914 86920 63523 77124 71715 82341 67979 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150160000 27792 3675 26107 52194;52195;52196 42109 42109 2372 1 9606 Homo sapiens -0.06121467307593775 TTSEELACPR Unmodified 1162.5288 0.52883709 2713 I3L2K0;B7ZM10;Q96QU8-2;Q96QU8 XPO6 Exportin-6 yes no 0 0 0 2 0 1 36.137 36.195 2 1.5684E-06 8167 20230619_1881_Aki_TMTPro18x_K_F2 171.36 128.11 41064 29617 37660 38005 43496 39194 42042 40123 49283 46473 47895 43739 52590 42548 38869 43421 60159 51170 37916 27198 38616 37714 44625 39589 42699 41099 49752 46554 49366 44488 52880 44005 40959 44043 57292 48553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23945000 27793 2713 26108 52197 42110 42110 1 9606 Homo sapiens -0.0459261785599665 TTSGALFPSLVPGSR Acetyl (Protein N-term) 1530.8042 0.80420731 3948 Q16186;B4DMP7;Q68E00;A0A087WX59;A0A087WUX6 ADRM1;DKFZp686G2045 Proteasomal ubiquitin receptor ADRM1 yes no 1 0 0 1.5 0.5 1 1 63.889 63.893 2 9.2177E-33 20343 20230619_1881_Aki_TMTPro18x_K_F2 149.96 141.92 39988 30528 32666 39875 31041 36543 37071 36073 42610 38709 40694 47122 43214 36654 40267 50129 41978 53250 36905 28033 33813 39447 32575 37187 37201 36978 43009 39237 41999 47097 43886 38866 41152 50299 40225 50503 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 194380000 27794 3948 26109 52198;52199 42111;42112;42113 42112 3 9606 Homo sapiens 0.06003737543687748 TTSGINPR Unmodified 844.44028 0.44028008 2777 CON__P02777 yes yes 0 0 0 6 0.816 1 1 1 30.612 30.665 2 0.0020595 5560 20230619_1887_Aki_TMTPro18x_K_F7 110.31 90.028 + 90726 46886 111050 76750 121150 163060 92557 110970 142460 79201 152770 185100 110300 127030 137680 56630 121070 132220 83855 43252 111080 76163 124570 156990 96636 116040 142360 85098 154630 180900 115400 129090 138150 62580 116070 124740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181220000 27795 2777 26110 52200;52201;52202 42114;42115;42116 42116 3 0.011837546865194781 TTSHTELVR Unmodified 1042.5407 0.5407224 2177 B0QYH4;B0QYH5;B7ZLJ8;Q9BYH1-2;Q9BYH1-3;Q9BYH1-5;Q9BYH1-4;Q9BYH1-7;Q9BYH1-6;Q9BYH1 SEZ6L Seizure 6-like protein yes no 0 0 0 4 0 1 27.846 27.92 3 0.00052884 4831 20230619_1883_Aki_TMTPro18x_K_F4 109.29 89.513 19220 14799 21192 20716 20361 23662 21207 21454 27851 26240 29521 33296 28719 23122 26776 17232 34987 33738 17780 13599 21348 20470 21252 23646 21547 22200 28057 26476 30198 33087 29241 23904 27658 18367 33387 31874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7789100 27796 2177 26111 52203 42117 42117 1 9606 Homo sapiens 0.021153669495106442 TTSLCAGPSASK Unmodified 1178.5601 0.56013721 879 A0A087X0M4;A0A8Q3WKX9;Q9BWU0;A0A087WWF4;B4DV74;A0A8Q3WKX3 SLC4A1AP Kanadaptin yes no 0 0 0 8 0 1 40.999 40.991 3 5.0205E-05 9913 20230619_1888_Aki_TMTPro18x_K_F8 98.105 79.325 39102 24502 42127 40042 47270 54906 44796 45040 76811 39256 51313 57390 52579 50739 46981 40171 70403 59703 36127 22579 42609 39333 48704 54132 46278 46543 75280 40632 53927 57182 53438 51989 49116 41661 67060 56539 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23423000 27797 879 26112 52204 42118;42119 42118 2 9606 Homo sapiens -0.022000448218932434 TTSPLEEEEREIK Unmodified 1559.7679 0.76788138 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 1 2 0 1 45.943 46.023 3 2.0833E-12 12598 20230619_1881_Aki_TMTPro18x_K_F2 162.32 133.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27798 2896 26113 52205 42120 42120 1 9606 Homo sapiens 0.010388158563500838 TTSPPEVSGYSYEK Unmodified 1543.7042 0.70421849 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 5 0.707 1 2 1 47.313 47.382 2;3 3.8528E-06 12565 20230619_1885_Aki_TMTPro18x_K_F5 130.01 119.18 93070 70349 76695 94756 87461 85601 90676 91739 113540 114480 107720 133740 114880 99177 120910 114950 121190 136870 85893 64623 79526 93540 90070 87421 91944 93934 114200 115040 111320 133580 117320 104290 122830 116510 116060 129710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 674190000 27799 630 26114 52206;52207;52208;52209 42121;42122 42122 2 9606 Homo sapiens -0.045885445807471115 TTSQLCWPLLK Unmodified 1345.7064 0.70640752 2082 A8K5Y7;Q9HAV4;B3KPQ5;B3KNC6;H0Y3W3 XPO5 Exportin-5 yes no 0 0 0 4.5 0.5 1 1 62.059 62.085 3 0.0027654 19220 20230619_1883_Aki_TMTPro18x_K_F4 73.666 53.003 47500 41599 43484 47067 42504 45581 52074 43942 55855 53087 48897 52668 65576 49768 41789 74648 71730 63297 43910 38125 44516 47076 44478 46188 52046 45283 56434 53164 51229 53421 65267 52760 44742 73873 68283 60271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92412000 27800 2082 26115 52210;52211 42123 42123 1 9606 Homo sapiens 0.04738257413987412 TTSSANNPNLMYQDECDR Unmodified 2114.8633 0.86333146 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;Q9UQL5 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 2.5 0.5 1 1 42.252 42.323 3 9.3166E-31 10897 20230619_1881_Aki_TMTPro18x_K_F2 236.75 234.01 38772 37689 41108 42506 48036 56391 46037 50445 56910 54026 54957 52756 57747 52651 50066 54834 65041 63828 35912 34529 41682 42720 49329 55831 46884 52013 57295 54388 56578 53617 58524 54436 51895 55560 62077 60534 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82107000 27801 1328 26116 52212;52213 42124;42125 42124 2 9606 Homo sapiens -0.14950567077221422 TTSSANNPNLMYQDECDRR Oxidation (M) 2286.9594 0.95935711 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;Q9UQL5 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 1 1 3 0.816 1 1 1 34.827 34.883 3 3.6262E-06 7507 20230619_1882_Aki_TMTPro18x_K_F3 110.82 93.54 102180 80554 89536 94001 93428 84192 103890 87684 102570 119730 126440 115100 131920 106810 108970 149220 136460 131810 94366 73876 92069 93730 96871 86047 104100 90259 105600 119120 128750 116870 133350 112700 112950 148170 130260 125390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 324000000 27802 1328 26117 52214;52215;52216 42126;42127 42126 841 2 9606 Homo sapiens -0.13264419237111724 TTSSANNPNLMYQDECDRR Unmodified 2270.9644 0.96444249 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;Q9UQL5 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 1 3.5 0.5 1 1 37.938 37.986 3 1.6372E-49 8751 20230619_1882_Aki_TMTPro18x_K_F3 282.67 267.58 165960 124910 155560 144950 114510 149700 158860 160700 145310 194660 168380 181160 211200 180870 179470 230740 226260 210740 153300 114570 158240 144890 123530 151240 157290 164300 150000 194390 173660 184520 212750 189200 185910 229800 215930 200430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 407360000 27803 1328 26117 52217;52218 42128;42129 42128 2 9606 Homo sapiens -0.1202011537452563 TTSSAYSYSLER Unmodified 1363.6256 0.62557424 2163 Q9NWE6;B4DZL5;A8MT40;Q8NCN5;H3BUH3;B7ZAR9;Q8NCN5-2 PDPR Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial yes no 0 0 0 6 0 1 42.67 42.764 2 5.241E-58 10666 20230619_1886_Aki_TMTPro18x_K_F6 290.51 264.95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27804 2163 26118 52219 42130 42130 1 9606 Homo sapiens -0.04169352095209433 TTTAAAVASTGPSSR Unmodified 1376.6896 0.68957148 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;A0A024R2V0;P27816-4;Q86Y04;P27816-5;B5MEG9;H7C4C5;H0Y2V1;F8W9U4 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 0 7.5 0.5 1 1 35.555 35.585 2 5.6842E-14 7706 20230619_1888_Aki_TMTPro18x_K_F8 188.91 167.51 43320 28375 38117 39261 42830 46427 42369 43302 53508 50699 59944 56230 59416 50489 46862 47569 64043 60261 39967 26089 39228 38842 44127 46326 43102 44646 54123 51022 61130 56632 60069 52136 48821 48564 61084 57116 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49578000 27805 2902 26119 52220;52221 42131;42132 42132 2 9606 Homo sapiens 0.016294280617330514 TTTESEVMK Oxidation (M) 1040.4696 0.46959087 2973 V9GYY3;F5H2F4;P11586;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TL46;A0A8C8UXK2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 1 0 2.5 0.5 1 1 36.492 36.548 2 0.0048946 8195 20230619_1882_Aki_TMTPro18x_K_F3 91.626 71.071 41357 17555 49656 41483 63388 66355 54207 64459 55685 41920 71211 84263 62320 65977 75636 28796 81618 72830 38190 16310 49904 40228 64450 65114 55285 65342 57179 44861 72065 82903 64599 66668 76735 32170 77973 68740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 26928000 27806 2973 26120 52222;52223 42133;42134 42134 1760 2 9606 Homo sapiens -0.04902513870160874 TTTESEVMK Unmodified 1024.4747 0.47467625 2973 V9GYY3;F5H2F4;P11586;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TL46;A0A8C8UXK2 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 3 0 1 40.488 40.545 2 1.0168E-11 9822 20230619_1882_Aki_TMTPro18x_K_F3 219.56 165.16 121650 67345 149430 127560 168380 209800 146120 155480 160670 147680 220520 252450 211950 197080 217790 96229 255150 233150 112470 62231 149650 124850 172930 204470 149210 162350 165130 152890 223310 249320 216960 199850 222710 106420 243610 220080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131630000 27807 2973 26120 52224 42135 42135 1 9606 Homo sapiens -0.036582100075293056 TTTGDVQVLGLVHTQK Unmodified 1695.9155 0.91554867 3435 Q59EZ3;P11717;S4R328 IGF2R Cation-independent mannose-6-phosphate receptor yes no 0 0 0 1 0 1 50.906 50.906 3 8.2293E-12 14728 20230619_1880_Aki_TMTPro18x_K_F1 166.83 134.23 46729 36464 43602 53449 51489 62679 50929 52163 52812 54792 56454 56750 57919 46467 54850 55957 58379 61203 43173 33524 44738 52659 52892 62404 51453 54088 53868 55289 57824 57171 58900 48796 56030 56370 55842 58065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24110000 27808 3435 26121 52225 42136 42136 1 9606 Homo sapiens 0.09542752180982461 TTTGSYIANR Unmodified 1082.5356 0.53563702 3516 Q6IAT9;P28072;I3L3X7;A0A087X2I4 PSMB6 Proteasome subunit beta type;Proteasome subunit beta type-6 yes no 0 0 0 7.5 0.5 1 1 35.315 35.345 2 5.3281E-07 7628 20230619_1888_Aki_TMTPro18x_K_F8 186.54 157.12 77091 47206 67176 77678 87656 125130 77807 84313 597740 86796 75232 103100 111880 96502 93070 81172 116020 111460 71096 43510 69466 76461 90602 121860 94426 88982 556880 89439 103280 103550 112450 98988 96156 83566 110760 105560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140630000 27809 3516 26122 52226;52227 42137 42137 1 9606 Homo sapiens -0.0023293691310755094 TTTHVPPELGQIMDSETFEK Unmodified 2259.0729 0.072913532 3318 O75844;A0A6Q8PHG9;A0A6Q8PF67;A0A6Q8PH40 ZMPSTE24 CAAX prenyl protease 1 homolog yes no 0 0 0 5 0 1 58.903 58.957 3 0.056195 17533 20230619_1885_Aki_TMTPro18x_K_F5 40.432 30.093 9936.1 6015.2 9218.2 8389.2 9612.6 8714.1 8452.5 10471 9455.5 12467 11722 11840 10868 9112.4 9726.2 10445 9504.1 12059 9167.2 5533.3 9420.2 8285.1 9910.5 8830.8 8632.8 10620 9683.3 12462 11882 11948 11060 9564.7 9903.4 10563 9113.3 11427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19509000 27810 3318 26123 52228 42138 42138 1 9606 Homo sapiens -0.006260008524350269 TTTIAVEVK Unmodified 960.54916 0.54916182 292 Q00341;A0A024R4E5;B2R5V9;B4DKR8;Q5HYC5 HDLBP;DKFZp686L08115 Vigilin yes no 0 0 0 7 0 1 47.674 47.762 2 0.00056548 12533 20230619_1887_Aki_TMTPro18x_K_F7 141.88 122.27 78173 67716 49906 56719 59684 69862 73900 64520 80245 76482 75105 70489 81312 70580 56192 78311 77237 80658 72094 61915 53250 58416 61705 69579 73833 66611 81189 76501 77509 71846 81624 73220 58866 78640 73720 76572 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288860000 27811 292 26124 52229 42139 42139 1 9606 Homo sapiens 0.06730920866152701 TTTLSGTAPAAGVVPSR Unmodified 1584.8471 0.84713476 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;A0A024R2V0;P27816-4;Q86Y04;P27816-5;B5MEG9;H7C4C5;H0Y2V1;F8W9U4;B4DSQ1 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 0 1.5 0.5 1 1 45.215 45.256 3 2.4785E-09 12225 20230619_1881_Aki_TMTPro18x_K_F2 132.59 108.74 145660 75548 124270 119080 124010 140220 117180 114800 243560 101120 115020 117370 118110 100330 114780 118480 134560 123840 134210 69657 127960 116900 129010 139540 122350 118710 235350 103790 124160 117870 120380 105010 117880 119060 128480 117600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174710000 27812 2902 26125 52230;52231 42140;42141 42141 2 9606 Homo sapiens 0.0781050760110702 TTTLTTTQR Unmodified 1021.5404 0.54038805 1036 O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V4K6;A0A7I2V581;Q57Z91;O60282-2;A0A7I2V352;A0A7I2YQQ7;A0A7I2V3V4 KIF5C Kinesin heavy chain isoform 5C;Kinesin-like protein yes no 0 0 0 7 0.816 1 1 1 33.263 33.305 2 7.908E-06 6622 20230619_1887_Aki_TMTPro18x_K_F7 177.97 141.79 45869 22972 53444 61271 64932 71265 57565 73052 67293 43303 64491 68482 58255 52458 59714 28122 70268 53422 42369 21372 53877 58778 66326 71255 58818 73681 67787 46137 66061 67788 59747 53359 61089 30188 67013 50534 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 28791000 27813 1036 26126 52232;52233;52234 42142;42143;42144 42143 3 9606 Homo sapiens 0.03047947229674719 TTTPGPSLSQGVSVDEK Unmodified 1701.8421 0.84210896 1813 O60934;A0A8V8TM88;A0A8V8TM80;A6H8Y5;A8K1D3;A0A8V8TKW6;A0A8V8TMH1;A0A8V8TMH6;A0A8V8TM94;A0A0C4DG07;A0A8V8TKY5;A0PJ71 NBN Nibrin yes no 0 0 0 5 0 1 48.303 48.38 3 1.1701E-09 13047 20230619_1885_Aki_TMTPro18x_K_F5 139.49 130.63 100570 71029 100410 111310 164020 161630 108260 103130 131200 122370 176010 163260 173440 153960 139010 154960 150340 172110 92915 65383 102980 109630 163730 158280 113130 109950 134120 123990 178230 163660 175460 159140 142680 156640 143880 163210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150750000 27814 1813 26127 52235 42145;42146 42146 2 9606 Homo sapiens 0.01926158947821932 TTTPYFL Unmodified 841.42217 0.4221704 494 A0A024R861;O00743-2;O00743;O00743-3;B7Z3E2 PPP6C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 0 7 0 1 62.419 62.455 2 0.080352 18907 20230619_1887_Aki_TMTPro18x_K_F7 69.39 61.386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27815 494 26128 52236 42147 42147 1 9606 Homo sapiens -0.004883802881977317 TTTTNTQVEGDDEAAFLER Unmodified 2096.9498 0.94982151 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;C9J813;Q6PJM5;Q6P707;Q05DR4;C9JEK3 CALD1 Caldesmon yes no 0 0 0 1.5 0.5 1 1 49.934 49.964 2;3 2.6170000000000004E-198 14312 20230619_1880_Aki_TMTPro18x_K_F1 488.96 468.75 67840 63444 73654 79257 90908 94382 88692 85459 105820 98397 85483 95088 98745 88670 94640 112400 103190 112030 62831 58188 74628 78931 92955 94105 90058 88264 106080 98683 89326 96447 100220 92919 96882 112490 98706 106370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135470000 27816 3798 26129 52237;52238 42148;42149 42148 2 9606 Homo sapiens -0.054775409793364815 TTTTTFK Acetyl (Protein N-term) 840.4229 0.42289868 4675 Q9UK76;J3KT51;Q9UK76-2;F2Z3M5 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes no 1 0 0 4.5 0.5 1 1 45.015 45.076 2 0.0395 11751 20230619_1883_Aki_TMTPro18x_K_F4 59.205 51.052 335580 278220 353370 350360 427170 441160 421860 424290 525110 374120 458240 423960 421290 353740 386080 354040 487830 393060 310460 255300 358560 349130 437560 438860 428790 433220 525840 382590 471390 425850 429560 367270 398600 358130 465110 373260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1084700000 27817 4675 26130 52239;52240 42150 42150 1 9606 Homo sapiens -0.003695856391345842 TTTVNIGSISTADGSALVK Unmodified 1833.9684 0.96837211 1760 A0A8I5KRX4;A0A8I5KRG4;A0A8I5KVC8;Q96B26;A0A8I5QJI7;Q5JXM0 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 yes no 0 0 0 8 0 1 57.669 57.721 3 2.0461E-07 16884 20230619_1888_Aki_TMTPro18x_K_F8 110.74 94.597 50668 41597 43994 51254 41920 53167 45609 51452 61006 48575 53052 51271 63285 55279 54169 63806 56988 63267 46801 38164 45262 50987 43906 53560 46268 52599 60928 49366 55235 52109 63845 57334 55454 63926 54542 60074 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 558530000 27818 1760 26131 52241 42151 42151 1 9606 Homo sapiens 0.08474665453127272 TTVEDFCMK Oxidation (M) 1145.4733 0.47329604 4705 Q9Y295;Q9UFA5;H0YI06 DRG1;DKFZp434N1827 Developmentally-regulated GTP-binding protein 1 yes no 0 1 0 4 0 1 46.401 46.445 3 0.0031701 12359 20230619_1883_Aki_TMTPro18x_K_F4 76.827 60.573 80311 63878 71233 73768 72079 87544 81155 81272 103400 89433 87669 92683 99563 77162 76206 108140 102070 97107 74179 58575 73155 73882 75167 87327 81981 83670 103440 90077 91213 93435 100110 81760 79504 107460 97376 92368 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30311000 27819 4705 26132 52242 42152 42152 2872 1 9606 Homo sapiens -0.09362167367953589 TTVEPTPGK Unmodified 928.48656 0.48656157 4548 Q9HC35;B5MBZ0;Q9HC35-2;B6EXY3;C1PHA1;J7MA22;C1PHA0 EML4;EML4-ALK variant 7;EML4-ALK;EML4-ALK variant 6 Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 0 4.33 0.471 2 1 38.542 38.61 2 0.0013608 8965 20230619_1885_Aki_TMTPro18x_K_F5 131.22 96.123 21223 10023 22665 23571 25810 33287 20331 23563 19223 24948 31082 41718 28795 26173 25574 17898 37738 43412 19583 9304.6 22957 22782 26444 32659 20816 24780 20142 25629 31302 40988 29324 27094 26689 19570 36029 40942 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26963000 27820 4548 26133 52243;52244;52245 42153;42154 42154 2 9606 Homo sapiens 0.01945774797957256 TTVEPTPGKGPK Unmodified 1210.6558 0.65575216 4548 Q9HC35;B5MBZ0;Q9HC35-2;B6EXY3;C1PHA1;J7MA22;C1PHA0 EML4;EML4-ALK variant 7;EML4-ALK;EML4-ALK variant 6 Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 1 8 0 1 38.642 38.629 3 0.016727 8952 20230619_1888_Aki_TMTPro18x_K_F8 65.395 50.423 22841 14174 32082 24633 32294 28405 24442 20312 16212 21006 29367 12086 12105 8511.8 39804 6460.4 8905.2 9203.4 21159 13073 31762 24061 33213 28260 24879 21343 17509 20911 28691 12590 14160 8812.8 38100 6787.8 8821.2 8711.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14796000 27821 4548 26134 52246 42155 42155 1 9606 Homo sapiens 0.058850513606330423 TTVEYLIK Unmodified 965.54335 0.54334816 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 7.5 0.5 1 1 54.617 54.681 2 1.3598E-05 15561 20230619_1888_Aki_TMTPro18x_K_F8 144.38 54.09 40119 37552 42971 41477 35767 40067 42986 41783 44149 48755 51357 44798 54878 42602 43003 60593 54784 51427 37153 34401 43297 41573 37904 40678 42983 42759 45219 48770 52451 45636 55312 44979 44684 60033 52280 48955 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18218000 27822 3833 26135 52247;52248 42156;42157 42157 2 9606 Homo sapiens 0.05919822354474036 TTVGVDGSLYK Unmodified 1138.587 0.58700389 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J6R1;A0A994J758;A0A994J432;A0A994J428;B3KRA9;A0A994J4Q4;A0A994J6R6 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 6.5 0.5 1 1 49.198 49.275 3 5.2718E-05 13236 20230619_1887_Aki_TMTPro18x_K_F7 125.74 67.064 101060 78160 81240 78287 93125 107680 103380 109360 143780 96387 99634 80736 100920 76424 102740 94099 102320 86634 93263 71590 84350 79508 96225 106710 104850 111190 142270 97730 104240 82615 103000 79963 104370 93895 97799 82422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63685000 27823 43 26136 52249;52250 42158;42159 42159 2 9606 Homo sapiens 0.023253870609551086 TTVISAVGTIVK Unmodified 1187.7125 0.71253876 533 A0A024R8R0;J3QQJ0;Q9UHR5-2;Q9UHR5;Q659G6 SAP30BP;DKFZp586L2022 SAP30-binding protein yes no 0 0 0 3.5 0.5 1 1 59.069 59.085 2;3 0.00016759 17934 20230619_1883_Aki_TMTPro18x_K_F4 132.78 111.91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27824 533 26137 52251;52252 42160;42161 42161 2 9606 Homo sapiens 0.126190989171846 TTVLAMDQVPR Oxidation (M) 1245.6387 0.63872189 87 Q2TB59;A0A024R0C3;Q13423;A0A590UJM2;A0A590UK29;E9PCX7;A0A590UK15;A0A590UJI3;D6RAI5;D6RHU2;A0A590UJA4;A0A590UKC7;D6RCR6 NNT NAD(P) transhydrogenase, mitochondrial yes no 0 1 0 5.5 0.5 1 1 42.958 43.045 2;3 0.00046325 10805 20230619_1885_Aki_TMTPro18x_K_F5 113.66 93.329 75178 65410 83283 82823 94181 95970 89845 92482 118370 79807 87773 84924 94315 79076 90162 95391 98853 89728 69604 60015 84077 82393 96808 95982 91717 94374 117650 81575 91766 85842 95870 82618 92259 95274 94435 85318 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 39240000 27825 87 26138 52253;52254 42162;42163 42162 41 2 9606 Homo sapiens 0.025728074831931735 TTVPEVEPPQDSHSR Unmodified 1677.7958 0.79582747 2433 B3KWQ6;P41219;P41219-2;H7C5W5 PRPH Peripherin yes no 0 0 0 2.75 0.829 2 1 1 37.526 37.58 3 4.8078E-12 8512 20230619_1881_Aki_TMTPro18x_K_F2 169.4 161.42 39430 22472 33103 35668 37151 41993 36913 39177 44163 41129 47989 56414 45950 42665 42473 46109 57991 53599 36342 20710 34228 35000 38298 41897 37470 40269 44720 41924 49021 56078 46836 44627 44124 46693 55305 50846 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2004099999.9999998 27826 2433 26139 52255;52256;52257;52258 42164;42165 42164 2 9606 Homo sapiens -0.015958611635824127 TTVPEVEPPQDSHSRK Unmodified 1805.8908 0.89079049 2433 B3KWQ6;P41219;P41219-2;H7C5W5 PRPH Peripherin yes no 0 0 1 4.5 0.5 1 1 36.911 36.979 4 9.8065E-06 8166 20230619_1883_Aki_TMTPro18x_K_F4 108.34 94.08 49464 36903 49926 49203 58924 58751 51804 52791 74247 58069 64680 56669 56507 52475 60180 52311 65404 56607 45716 33898 50795 48801 60293 58559 53342 54475 73935 58409 66401 57461 58144 54251 61371 52847 62467 53753 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 337390000 27827 2433 26140 52259;52260 42166;42167 42166 2 9606 Homo sapiens 0.0200807230760347 TTVVYPATEK Unmodified 1107.5812 0.58119023 1436 A0A384MTI8;Q96C86;Q53G42;A0A3B3ITF0 DCPS m7GpppX diphosphatase yes no 0 0 0 6 0 1 44.854 44.943 2 1.3403E-07 11680 20230619_1886_Aki_TMTPro18x_K_F6 218.55 150.57 65966 46640 51785 58098 73285 78842 78763 76464 93825 87592 98341 99083 101020 86743 84491 102750 117240 100140 60836 42821 54157 57998 74602 78095 79526 78557 94891 88293 100790 99665 102270 90714 88107 102800 111740 95201 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60116000 27828 1436 26141 52261 42168 42168 1 9606 Homo sapiens 0.031702885492677524 TTVYQGHTALLQCEAQGDPK Unmodified 2216.0532 0.053181143 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-5;Q13308-3;Q59FV9 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 6.5 0.5 1 1 45.579 45.666 3 3.1511E-16 11990 20230619_1886_Aki_TMTPro18x_K_F6 157.88 145.76 18474 15987 17488 14890 14395 20819 19186 20105 27519 26780 27836 45267 43354 38691 19854 53946 52083 57884 17081 14629 17792 15225 15382 20583 19328 20765 27588 27274 29309 44877 42691 40916 22570 54072 49561 54916 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115590000 27829 3847 26142 52262;52263 42169 42169 1 9606 Homo sapiens -0.0062033207254899025 TTYALLPACGPHGDAR Unmodified 1698.8148 0.81478877 3233 O15069 NACAD NAC-alpha domain-containing protein 1 yes yes 0 0 0 8 0 1 44.465 44.484 3 5.7596E-09 11263 20230619_1888_Aki_TMTPro18x_K_F8 143.14 125.04 41180 41982 38784 40185 34309 47722 47557 43819 59498 45815 50634 47858 51939 47126 53157 55502 53708 54316 38118 38402 39558 40858 36445 47595 47533 45096 59523 46300 52416 48500 53051 49064 54076 55570 51387 51600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45276000 27830 3233 26143 52264 42170;42171 42170 2 9606 Homo sapiens -0.006666030735459572 TTYDHVTR Unmodified 991.47231 0.47230849 504 A0A024R886;O95900-2;O95900 TRUB2 Probable tRNA pseudouridine synthase 2 yes no 0 0 0 3.5 0.5 1 1 27.627 27.724 3 0.0032169 4809 20230619_1883_Aki_TMTPro18x_K_F4 90.629 43.026 9253.1 4850.3 9504.3 9508.2 14417 10990 11109 11200 11470 9216.3 11832 12440 11909 10751 10250 7460.7 12594 12433 8538.8 4485.7 9700.9 9232.7 14456 11010 11405 11375 11675 9520.8 12129 12417 12078 10975 10565 7839.6 12026 11757 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7797700 27831 504 26144 52265;52266 42172 42172 1 9606 Homo sapiens -0.023768776303199957 TTYDQMYNDLLR Unmodified 1531.6977 0.69769333 2545 B4DMK6;Q9NP77;Q9NP77-2 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 yes no 0 0 0 6 0 1 59.514 59.576 2 2.7791E-07 17941 20230619_1886_Aki_TMTPro18x_K_F6 159.94 124.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27832 2545 26145 52267 42173 42173 1 9606 Homo sapiens -0.04688761013107978 TTYDSSLSSYTVPLEK Unmodified 1789.8622 0.8621757 4285 Q8WWM7;Q8WWM7-3;Q8WWM7-2;A0A024QZB7;Q8WWM7-5;Q8WWM7-4;Q8WWM7-8;Q8WWM7-6;Q8WWM7-9;H3BUF6;A0A024QZ91;A0A024QZC0;Q8WWM7-7;H3BSK9 ATXN2L Ataxin-2-like protein yes no 0 0 0 6.5 0.5 1 1 58.36 58.42 3 6.1293E-11 17468 20230619_1886_Aki_TMTPro18x_K_F6 146.47 127.21 142710 112300 149550 175760 138970 166810 168030 155420 173890 210840 207250 224900 249510 215010 194670 274910 238900 244960 131980 103330 151370 172050 146020 169000 167950 161140 178360 210500 213000 227370 250750 225210 201810 273390 228200 232960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 537680000 27833 4285 26146 52268;52269 42174;42175;42176 42174 3 9606 Homo sapiens -0.001160901121693314 TTYGGAAAAVR Unmodified 1036.5302 0.53015772 68 A0A024QZW7;P49790;P49790-3;P49790-2 NUP153 Nuclear pore complex protein Nup153 yes no 0 0 0 7.5 0.5 1 1 35.983 36.051 2 6.5416E-12 7898 20230619_1888_Aki_TMTPro18x_K_F8 179.37 151.89 50649 41397 43638 46457 73721 76476 58084 57241 85362 16083 20233 17730 17131 16866 36675 18077 20495 12148 46780 37946 45376 46885 73808 74620 60240 58696 82604 18669 23708 17947 18547 17467 35950 17881 19708 11632 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29203000 27834 68 26147 52270;52271 42177;42178 42178 2 9606 Homo sapiens 0.01335384295066433 TTYLEFIQQNEER Acetyl (Protein N-term) 1711.8053 0.80532952 2974 F5H365;Q15436;B4DSQ5;B4E0Q9;G3V4V1;G3V1W4;G3V3G5;G3V2R6;G3V5X8;G3V4Q2;G3V5K1 SEC23A Protein transport protein Sec23A yes no 1 0 0 1.5 0.5 1 1 64.113 64.116 2 2.8216E-08 20467 20230619_1881_Aki_TMTPro18x_K_F2 113.93 76.815 17903 17078 18000 17846 17224 21806 21077 21966 24270 24878 27330 33063 35067 26382 25454 27912 27433 36858 16573 15636 18270 18023 18079 21753 21133 22503 24674 25229 28265 32943 35058 27540 26178 28517 26294 34879 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 94411000 27835 2974 26148 52272;52273 42179;42180 42180 2 9606 Homo sapiens -0.02210092878044634 TTYLVLDEADR Unmodified 1294.6405 0.64049603 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DN41;B4DNG2;A0A0G2JLI4;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;A0A7I2V5F5;J3KRZ1;J3QSF1 DDX5;DKFZp686J01190 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 2 0.816 1 1 1 52.552 52.583 2 7.974E-23 15543 20230619_1881_Aki_TMTPro18x_K_F2 248.96 212.45 617640 532610 581210 644770 527050 674690 639430 635270 714930 742430 660070 633560 797290 651720 587190 855260 721070 704510 571030 488470 593140 642310 555610 678910 640640 654600 722380 741370 685450 649080 799330 682450 609670 846970 688510 670800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1728899999.9999998 27836 3137 26149 52274;52275;52276 42181;42182;42183 42182 3 9606 Homo sapiens 0.004961397728038719 TTYMDPTGK Oxidation (M) 1028.4485 0.4484615 1968 A6NFX8;Q9UKK9;A6NJU6;A6NCQ0;C9JYY9 NUDT5 ADP-sugar pyrophosphatase yes no 0 1 0 5 0 1 39.798 39.888 2 0.0076143 9436 20230619_1885_Aki_TMTPro18x_K_F5 85.161 60.529 78751 58406 59905 73635 80707 79511 70859 73566 81262 76630 101980 87483 92673 88462 89113 98074 107930 91607 72632 53618 62797 73167 81908 79846 72362 75655 82983 77637 103150 88456 94783 91663 91761 98027 102970 87137 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74722000 27837 1968 26150 52277 42184 42184 1247 1 9606 Homo sapiens -0.06462479179026559 TTYMDPTGK Unmodified 1012.4535 0.45354688 1968 A6NFX8;Q9UKK9;A6NJU6;A6NCQ0;C9JYY9 NUDT5 ADP-sugar pyrophosphatase yes no 0 0 0 6 0 1 45.292 45.378 2 0.00013083 11847 20230619_1886_Aki_TMTPro18x_K_F6 166.16 127.37 160220 129220 148080 142120 160880 191100 167670 149800 187190 202960 222000 212470 230110 193090 179010 227540 252590 223800 148040 118430 151610 143150 166420 188590 169280 157330 191060 202600 226360 214650 232200 201650 187240 227770 240760 212710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161380000 27838 1968 26150 52278 42185 42185 1 9606 Homo sapiens -0.05218175316406359 TTYQALPCLPSMYGYPNR Unmodified 2130.9867 0.98668148 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 5 0.816 1 1 1 61.418 61.454 3 1.968E-06 18496 20230619_1885_Aki_TMTPro18x_K_F5 100.77 18.895 61137 63875 60626 72887 64260 81076 66939 61983 94779 87085 76082 77260 80682 68578 68389 95743 78230 85429 56626 58512 61769 72954 66664 80924 68174 65335 94256 86420 79130 78583 81634 72459 70459 95114 74805 81224 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 365670000 27839 3647 26151 52279;52280;52281 42186;42187 42187 2 9606 Homo sapiens -0.03357239168144588 TVAATNMNETSSR Unmodified 1380.6303 0.63034205 1516;3275 Q12756-3;A0A3B3ITW6;A0A3B3ITF7;Q12756;Q12756-2;A0A3B3ITE5;A0A3B3IUA1;A0A3B3IT28;A0A3F2YNW9;A0A3B3IU40;X5D7J0;A0A087WWA3;A0A8Q3WLB3;Q4R9M9;Q4R9M8;A0A8Q3WM94;A0A8Q3WLB2;A0A024R4H4;O60333-2;O60333;O60333-4;Q4R9M7;O43896;H7C0K6;A0A8Q3WL98;X5D2L7;O60333-3 KIF1A;KIF1B;KIF1Bbeta;KIF1C Kinesin-like protein KIF1A;Kinesin-like protein;Kinesin-like protein KIF1B;Kinesin-like protein KIF1C no no 0 0 0 4 0 1 34.651 34.702 2 9.897E-06 7431 20230619_1883_Aki_TMTPro18x_K_F4 158.04 138.05 10205 6389.8 12492 11702 6667.6 10864 7207.1 10315 9978.4 11679 17526 13877 15744 12855 12650 8577.5 15684 16102 9439.8 5897.8 12407 11364 7429.3 11019 7349.5 10609 10302 11794 17516 13956 15969 13082 13061 9123.9 14979 15212 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6620600 27840 1516;3275 26152 52282 42188 42188 1 9606 Homo sapiens -0.04474791224083674 TVAGGAWTYNTTSAVTVK Unmodified 1825.921 0.92102798 3698 P61513;C9J4Z3 RPL37A 60S ribosomal protein L37a yes no 0 0 0 2.67 0.471 1 2 55.219 55.253 3;4 1.0636E-09 16474 20230619_1882_Aki_TMTPro18x_K_F3 135.09 114.43 745260 556810 692650 747350 627480 836430 757300 756750 897340 964270 740910 963550 1008200 781410 569000 1072200 971020 1044800 688350 511490 707530 740060 661840 836740 760410 784140 901130 963260 780190 971190 999610 827770 611310 1069600 925690 992370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3194999999.9999995 27841 3698 26153 52283;52284;52285 42189;42190 42190 2 9606 Homo sapiens 0.04110430972764334 TVAIYSEQDTGQMHR Unmodified 1734.7995 0.79953264 332 A0A024R5C5;P11498;A0A494C101;A0A494C0T2;A0A494C016;P11498-2;E9PRE7 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 40.603 40.654 3 6.0398000000000006E-64 9827 20230619_1883_Aki_TMTPro18x_K_F4 277.31 250.77 48281 35508 56548 53534 58135 59291 38606 53931 61808 62274 75607 79985 78617 73455 71060 66323 85271 97707 44679 32664 56731 52646 59730 59391 40871 55658 62223 63035 77070 80144 79830 75621 73149 68536 81535 92425 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171120000 27842 332 26154 52286;52287 42191 42191 1 9606 Homo sapiens -0.03847514661379137 TVALWDLR Unmodified 972.53927 0.53926584 2910;3814 E9PC52;Q6FHQ0;Q16576;Q16576-2;A8K6A2;Q5JP02;Q09028-3;Q09028-2;Q09028;Q09028-4;H0YF10;H0YCT5;H0YDK2;H0YEU5;B4DRT0 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 no no 0 0 0 4.5 3.5 1 1 58.423 58.447 2 0.0013465 17871 20230619_1880_Aki_TMTPro18x_K_F1 155.75 73.97 1904700 1825600 1827000 1671300 1754100 2539300 2021600 2103900 2317000 807670 705700 478670 611870 541240 1266300 774660 767210 415780 1762500 1669700 1861200 1713500 1840200 2491100 2031400 2143800 2274500 878830 795820 505190 659160 568220 1245800 756370 736450 400000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2539000000 27843 2910;3814 26155 52288;52289 42192;42193 42192 2 9606 Homo sapiens 0.05189777651435179 TVAMHEVFLCR Unmodified 1361.6584 0.65841147 2117 A8K885;Q9UNH7;A0A0A0MRI2;B4DJS7;Q9UNH7-2;G3V5X9 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 1 0 1 47.025 47.025 3 1.3738E-08 13117 20230619_1880_Aki_TMTPro18x_K_F1 144.27 108.31 35948 27821 28063 35530 28900 37863 37701 39007 38421 38230 34608 37673 44152 36485 36415 47709 44490 48092 33169 25540 29233 35269 30249 38116 37522 39745 38968 38658 36128 38242 44396 38278 37674 47747 42514 45661 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61511000 27844 2117 26156 52290 42194 42194 1 9606 Homo sapiens -0.007951397776650992 TVAMHEVFLCR Oxidation (M) 1377.6533 0.65332609 2117 A8K885;Q9UNH7;A0A0A0MRI2;B4DJS7;Q9UNH7-2;G3V5X9 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 1 0 7.5 0.5 1 1 40.988 41.018 3 0.016944 9902 20230619_1888_Aki_TMTPro18x_K_F8 59.418 47.804 54465 46778 57020 52360 62556 63651 63156 61625 69729 63886 75146 67949 72444 63426 62451 70219 72736 73555 50397 42870 57759 52599 64505 63488 63861 63151 70856 64583 76668 68682 73561 65931 64291 70624 69499 69824 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102260000 27845 2117 26156 52291;52292 42195 42195 1332 1 9606 Homo sapiens -0.020394436402966676 TVANLLSGK Unmodified 901.52328 0.52328142 1505 Q13428-4;A0A3B3IS06;Q13428-3;Q13428;Q13428-7;Q13428-6;Q13428-8;Q13428-2;E7ETY2;Q13428-5;H0Y8Y7;A0A2R8Y857 TCOF1 Treacle protein yes no 0 0 0 3 0 1 54.526 54.573 2 1.5804E-06 16182 20230619_1882_Aki_TMTPro18x_K_F3 135.55 64.169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27846 1505 26157 52293 42196 42196 1 9606 Homo sapiens 0.06858071414524147 TVANMIK Oxidation (M) 791.42112 0.42112454 2881 E5RJR5;E5RI56;P63208;E7ERH2;F8W8N3;P63208-2 SKP1 S-phase kinase-associated protein 1 yes no 0 1 0 8 0 1 39.989 39.978 2 0.036235 9477 20230619_1888_Aki_TMTPro18x_K_F8 87.323 22.546 248480 201490 229450 222320 319390 330710 284400 291880 298300 128220 135420 100870 94507 86820 209540 98134 122950 85646 229600 184670 235960 224310 323540 325340 289110 296370 296110 137820 144850 103390 103270 90597 205650 98114 118220 81616 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76085000 27847 2881 26158 52294 42197 42197 1709 1 9606 Homo sapiens 0.017070820712774548 TVAPMPPAQDHK Oxidation (M) 1306.634 0.63397086 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2;F8WD69;C9JBJ1;C9JTV6;H7C366 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 1 0 5.67 0.471 1 2 36.018 36.089 3 1.2692E-05 8168 20230619_1886_Aki_TMTPro18x_K_F6 128.08 105.16 66188 47105 57041 65341 89290 83043 74751 73906 87286 74851 89088 88157 94264 72923 85260 88068 96875 89757 61082 43296 59221 64689 89719 82444 76585 76156 88266 76027 91538 88404 95571 76551 87507 88349 92528 85259 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 282610000 27848 3488 26159 52295;52296;52297 42198;42199;42200 42200 2149 3 9606 Homo sapiens -0.00708076659566359 TVAPMPPAQDHK Unmodified 1290.6391 0.63905624 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2;F8WD69;C9JBJ1;C9JTV6;H7C366 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 6.5 0.5 1 1 39.043 39.117 3 1.123E-09 9139 20230619_1886_Aki_TMTPro18x_K_F6 171.62 144.19 88070 76156 87965 90962 103520 102630 97510 97332 116480 110930 122430 117980 130810 107610 107220 138500 144760 125720 81464 69835 89600 90812 106070 102820 99270 100160 117840 111620 125650 119170 132140 112970 111680 137870 138010 119610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 178930000 27849 3488 26159 52298;52299 42201;42202 42201 2 9606 Homo sapiens 0.0053622720304247196 TVAQSQQLETNSQR Unmodified 1588.7805 0.78051176 770 Q5U0C2;Q53HK8;A0A024RDQ8;P40938;B4DKE6;P40938-2 RFC3 Replication factor C subunit 3 yes no 0 0 0 4.5 0.5 1 1 35.069 35.138 3 1.6613999999999999E-46 7592 20230619_1883_Aki_TMTPro18x_K_F4 237.59 208.29 26026 19506 27582 29639 34741 29859 28767 27645 33443 30065 36403 41441 35483 34794 33393 27646 38513 36921 24064 17944 27995 29088 35292 30140 29503 28478 33917 30608 37204 41291 36176 35716 34241 28443 36788 34975 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139270000 27850 770 26160 52300;52301 42203;42204 42203 2 9606 Homo sapiens 0.009672720392700285 TVASPGVSVEEAVEQIDIGGVTLLR Unmodified 2538.3541 0.35409742 2560 B4DP06 yes yes 0 0 0 5.5 0.5 1 1 65.612 65.655 3 7.393E-54 20606 20230619_1886_Aki_TMTPro18x_K_F6 256.9 228.03 12112 8726.2 9956.1 11134 11382 9988.2 10584 12675 9144.9 13316 14365 13910 12245 11199 13652 12042 12435 16481 11174 8012.9 10317 11034 11669 10256 10687 12775 9622.4 13425 14402 13999 12632 11690 13783 12340 11938 15592 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41989000 27851 2560 26161 52302;52303 42205;42206 42206 2 9606 Homo sapiens 0.14645453058938074 TVASTAMNSQSSR Unmodified 1338.6198 0.61977736 3350 Q59HG1;O95239;O95239-2;Q6PKB2;B4DYE2;Q2VIQ3 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 0 0 8 0 1 34.288 34.28 2 8.3174E-11 7193 20230619_1888_Aki_TMTPro18x_K_F8 187.85 146.55 19880 15535 18422 15990 19653 20809 22961 20165 28286 16556 18074 17472 24903 20874 16649 18715 24093 14260 18366 14232 18841 16190 20408 20670 23108 20552 28072 16986 19311 17820 24816 21299 17491 18595 22912 13627 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16060000 27852 3350 26162 52304 42207 42207 1 9606 Homo sapiens -0.0359877387850247 TVATPLNQVANPNSAIFGGAR Unmodified 2097.0967 0.096700937 3913;3914 Q15056;A0A7I2V4E4;A0A7I2V3E4;Q75MT8;A0A7I2V3D5;Q15056-2;A4D198 EIF4H;WBSCR1;LOC392647 Eukaryotic translation initiation factor 4H no no 0 0 0 3.4 1.02 1 2 1 1 59.076 59.101 3 1.2343E-66 17695 20230619_1883_Aki_TMTPro18x_K_F4 293.13 276.06 88589 67488 84051 91656 79316 95261 95937 90371 114210 105750 102610 108620 119360 100960 108230 118120 108020 119400 81846 61998 85748 90603 83297 95910 96321 93101 114860 106180 106610 109870 120750 105310 110290 118470 103430 113350 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1071799999.9999999 27853 3913;3914 26163 52305;52306;52307;52308;52309 42208;42209;42210;42211 42210 4 9606 Homo sapiens 0.09203645486923051 TVATPLNQVANPNSAIFGGARPR Unmodified 2350.2506 0.25057582 3913;3914 Q15056;A0A7I2V4E4;A0A7I2V3E4;Q75MT8;A0A7I2V3D5;Q15056-2;A4D198 EIF4H;WBSCR1;LOC392647 Eukaryotic translation initiation factor 4H no no 0 0 1 7 0 1 53.209 53.279 4 5.2412E-44 15082 20230619_1887_Aki_TMTPro18x_K_F7 236.96 219.16 33432 27119 33028 37221 30589 32037 32799 41057 36909 31864 37568 32758 32262 31282 36985 33513 28230 37956 30909 24910 33568 36693 32015 32991 33105 41060 37368 32715 38260 33195 33332 32426 37029 33904 27162 35968 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 343790000 27854 3913;3914 26164 52310 42212 42212 1 9606 Homo sapiens 0.12946055252450606 TVAVWDSETGER Unmodified 1348.6259 0.62590859 1897 B2R9I9;A0MNP2;Q96DI7;Q96DI7-2 WDR57;SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes no 0 0 0 2 0.816 1 1 1 47.365 47.416 2 0.0010282 13262 20230619_1881_Aki_TMTPro18x_K_F2 96.113 83.158 109970 86044 95798 109290 107990 128830 120550 109200 127110 144820 146610 145970 144390 126720 137260 159540 158670 164010 101550 78981 98779 108680 111640 128320 121010 113890 129990 144470 149410 147490 147140 133080 141010 159970 151650 155710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253750000 27855 1897 26165 52311;52312;52313 42213 42213 1 9606 Homo sapiens -0.03445932375348093 TVAYTEQK Unmodified 938.47091 0.4709115 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;A0A8I5KYJ6;A0A8I5KXE2 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 5 0.816 1 1 1 39.802 39.891 2 0.00013495 9449 20230619_1885_Aki_TMTPro18x_K_F5 190.26 69.618 162700 74123 211190 211300 330570 360790 248980 336210 261650 133130 258910 293400 186800 195040 321550 81768 307450 245040 150400 69105 212290 203790 331560 352520 256390 339410 265150 150360 263130 287050 199580 198390 322440 93944 293870 231230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190030000 27856 2389 26166 52314;52315;52316 42214;42215;42216 42215 3 9606 Homo sapiens -0.0007851171908441756 TVCERPGPAACAQVAR Unmodified 1741.8352 0.83520664 4648 Q9P2H5 USP35 Ubiquitin carboxyl-terminal hydrolase 35 yes yes 0 0 1 7 0 1 33.969 34.05 3 1.0184E-05 6933 20230619_1887_Aki_TMTPro18x_K_F7 107.61 89.013 4686 4300.6 5177.2 4362 7569.8 5728.3 6196.8 7626.2 9188.7 6703.7 5347.1 6332.9 5186.7 5980.8 5547.5 6710.1 8904.7 8931.2 4340.1 3937.1 5246.2 4425.2 7619.8 5740.6 6419.6 7626.1 9036.8 6816 5667.2 6430.5 5333.9 6217.3 5826.1 6851.1 8487.7 8459.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3722000 27857 4648 26167 52317 42217 42217 1 9606 Homo sapiens -0.00603755685347096 TVCGTPGYCAPEILR Unmodified 1692.7964 0.79636152 3951 Q16566;B2R747 CAMK4 Calcium/calmodulin-dependent protein kinase type IV yes no 0 0 0 7.5 0.5 1 1 51.792 51.868 2 1.3218E-10 14314 20230619_1888_Aki_TMTPro18x_K_F8 213.59 191.4 89233 83548 88937 80475 36995 39835 55629 60541 51824 108180 96712 83838 111280 83841 67300 110580 100790 87571 82584 76448 89505 81112 43015 43936 55051 61717 55039 105920 97603 86241 110950 87939 71292 109280 96022 83468 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 142400000 27858 3951 26168 52318;52319 42218;42219 42219 2 9606 Homo sapiens -0.022324810397094552 TVCGVVSR Unmodified 876.44874 0.44873627 43 P19367-3;P19367;Q59FD4;P19367-2;P19367-4;B3KXY9;A0A024QZK7;A8K7J7;B4DG62;A0A994J753;A0A994J761;A0A994J758;A0A994J4Q0;A0A994J428;A0A994J4Q4 HK1 Hexokinase-1;Hexokinase yes no 0 0 0 8 0 1 35.97 35.957 2 0.0026268 7856 20230619_1888_Aki_TMTPro18x_K_F8 123.72 76.639 161510 99758 169460 210650 263550 266670 293970 283310 327480 215960 254720 252170 316340 244370 220520 187430 290070 261060 149180 92291 173210 204110 266880 265590 295430 286450 328460 223180 267360 254040 316240 249550 229540 193540 276660 247280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 277990000 27859 43 26169 52320 42220 42220 1 9606 Homo sapiens 0.005569853315023465 TVCSQQYR Unmodified 1040.4709 0.47092828 1616 Q27J81;Q27J81-2;A0A6Q8PHA2;A0A6Q8PH71;A0A6Q8PHG2;A0A6Q8PGN3;A0A6Q8PF44;A0A6Q8PH25;A0A6Q8PF29;A0A087X118;A0A6Q8PFW4;A0A6Q8PGC7;A0A6Q8PH63;A0A6Q8PGU8;A0A6Q8PH59;A0A6Q8PFN5;A0A6Q8PFB9;A0A6Q8PGY8;A0A6Q8PH52;Q27J81-3;A0A6Q8PGX4;A0A6Q8PFY4;A0A6Q8PG64;A0A6Q8PFJ1 INF2 Inverted formin-2 yes no 0 0 0 6.5 0.5 1 1 31.458 31.523 2 0.010693 5916 20230619_1887_Aki_TMTPro18x_K_F7 105.57 45.768 32893 15860 31978 32228 60164 62966 37721 43899 44496 7662.2 11019 10707 9273.2 9402.4 25320 5906.1 15199 10812 30330 14684 32975 31556 59649 60862 39533 45160 43520 9856.9 12840 10714 10302 9555.9 24795 6329.8 14610 10233 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17603000 27860 1616 26170 52321;52322 42221;42222 42222 2 9606 Homo sapiens -0.047688349907502925 TVDFTQDSNYLLTGGQDK Unmodified 2000.9327 0.93271488 4727 Q9Y3F4;Q9Y3F4-2;B0AZV0 STRAP Serine-threonine kinase receptor-associated protein yes no 0 0 0 5.5 0.5 1 1 61.363 61.415 3 1.7354E-07 18736 20230619_1886_Aki_TMTPro18x_K_F6 119.55 106.93 196560 176190 207790 221310 188490 218540 215970 203670 223730 262800 227320 205110 275360 214930 240460 285510 268500 252750 181940 161630 209950 219750 198060 220860 216460 210730 227940 260650 235030 211290 277740 225230 246910 283810 256520 240470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1113000000 27861 4727 26171 52323;52324 42223;42224 42224 2 9606 Homo sapiens -0.027714167945305235 TVDGPSGK Unmodified 759.37628 0.37628284 3382 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q0QET7;A4UCT1 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 4.67 0.471 1 2 35.697 35.766 2 0.00030651 7850 20230619_1885_Aki_TMTPro18x_K_F5 146.27 92.712 122840 78100 226780 207810 411520 299740 205340 463350 168780 116320 257740 340990 116140 204870 321130 86146 235010 226450 114220 72564 224120 200410 405700 299840 218720 451890 177330 142450 255000 331110 133360 209030 316880 97166 225630 213630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158790000 27862 3382 26172 52325;52326;52327 42225;42226 42226 2 9606 Homo sapiens -0.013030254704176514 TVDLKPDWGK Unmodified 1157.6081 0.60807369 2088 V9HW72;A8K690;P31948;P31948-2;P31948-3;F5H783;F5GXD8 HEL-S-94n;STIP1 Stress-induced-phosphoprotein 1 yes no 0 0 1 8 0 1 51.598 51.675 3 0.0019939 14243 20230619_1888_Aki_TMTPro18x_K_F8 89.827 61.814 2302100 1931800 2077600 2228400 1800100 2113100 2085600 2225100 2155400 2777700 2757300 2515400 2841600 2309100 2439900 2920100 2834000 2849900 2127300 1771000 2125800 2225300 1900700 2148400 2090300 2279900 2218600 2768100 2802400 2559500 2877600 2421800 2512600 2919200 2707900 2707500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1638999999.9999998 27863 2088 26173 52328 42227 42227 1 9606 Homo sapiens 0.0355739716046628 TVDLQDAEEAVELVQYAYFK Unmodified 2330.1318 0.13180862 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46;Q7Z6P5 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 7 0 1 67.369 67.391 3 0.063462 21062 20230619_1887_Aki_TMTPro18x_K_F7 47.754 39.046 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27864 1104 26174 52329 42228 42228 1 9606 Homo sapiens 0.01994798713531054 TVDLSSHLAK Unmodified 1069.5768 0.57677356 3384 P04843;Q6IBR0;Q53EP4;B4DL99;F8WF32 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 7.5 0.5 1 1 44.448 44.498 3 4.5631E-05 11273 20230619_1888_Aki_TMTPro18x_K_F8 139.86 67.215 190520 200410 269200 197220 296540 269260 289110 251710 230980 217550 230830 193960 191160 128800 297950 148320 148500 151160 177090 183350 266850 200660 304770 266680 290180 257450 238620 220910 235140 195770 201000 136230 292020 149400 143550 143530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 477410000 27865 3384 26175 52330;52331 42229 42229 1 9606 Homo sapiens 0.04476824126390966 TVDNFVALATGEK Unmodified 1363.6983 0.69834526 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0T7U3 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 0 0 7.2 0.748 1 2 2 62.221 62.256 2;3 3.7868000000000004E-56 18823 20230619_1887_Aki_TMTPro18x_K_F7 375.1 312.52 1080500 1036700 1128800 1319500 1170100 1429900 1409800 1444200 1571000 1705100 1636100 1836500 1803900 2107400 1200800 2629500 1206100 2219600 1000600 950890 1144800 1310500 1219500 1437500 1412700 1481200 1595000 1713600 1683500 1868900 1810800 2189100 1240500 2606700 1161000 2108800 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 12596000000 27866 1716 26176 52332;52333;52334;52335;52336 42230;42231;42232;42233 42231 4 9606 Homo sapiens 0.031044016982377798 TVDSQGPTPVCTPTFLER Unmodified 2003.9622 0.96224087 4471 Q9BYG3;C9J808;H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 0 0 0 6 0 1 54.344 54.421 3 6.2744E-14 15774 20230619_1886_Aki_TMTPro18x_K_F6 159.04 149.94 163720 116310 151470 161130 143340 173630 169460 165040 158950 197880 182760 179970 225040 180330 166680 222610 212460 229420 151170 106900 154840 159170 150320 174360 169080 170080 163730 197620 188190 183570 225510 188340 173360 223220 202960 217770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 436770000 27867 4471 26177 52337 42234;42235 42235 2 9606 Homo sapiens 0.0004182394993677008 TVEALYK Unmodified 822.44872 0.4487195 669 Q8NCF7;A0A024RBE8;A0A024RBH9;Q00325-2;Q00325;F8VVM2;Q53HC3;B2RE88 SLC25A3 Phosphate carrier protein, mitochondrial yes no 0 0 0 6.5 0.5 1 1 47.954 48.038 2 0.0068189 12650 20230619_1887_Aki_TMTPro18x_K_F7 138.37 56.105 819990 680640 745340 845620 1473900 1470800 935630 990590 1129800 715790 903220 960830 861300 763810 824840 908830 1052000 983100 757720 624480 774590 847960 1458200 1429000 980370 1037400 1130200 746690 935940 958000 879260 801800 852350 914900 1003900 933220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 707350000 27868 669 26178 52338;52339 42236;42237 42237 2 9606 Homo sapiens 0.030393086031381245 TVECEEGSEDDESLREMVELAAQR Unmodified 2781.2069 0.20691719 3987 Q53F02;Q9UKF6;G5E9W3;B4DQR2;A4UCU1 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes no 0 0 1 2 0 1 60.462 60.474 3 1.075E-63 18816 20230619_1881_Aki_TMTPro18x_K_F2 287.14 272.19 21302 19180 21213 17472 14344 17943 20658 18910 21998 22162 24614 18242 19951 17649 21826 23442 20088 24958 19709 17545 21433 17820 15627 18141 20514 19341 22427 22104 24888 18705 20599 18537 22077 23541 19270 23671 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20603000 27869 3987 26179 52340 42238 42238 1 9606 Homo sapiens -0.11243799670455701 TVEDLDGLIQQIYR Unmodified 1661.8625 0.86245047 1708 A0A7P0TAE3;Q9ULX6;A0A7P0TAJ5;Q9ULX6-2 AKAP8L A-kinase anchor protein 8-like yes no 0 0 0 6.5 0.5 1 1 64.654 64.69 3 0.01526 19946 20230619_1887_Aki_TMTPro18x_K_F7 61.409 47.747 25179 16936 22455 21924 22348 25384 21865 22446 27654 23737 26911 28563 27842 23384 29728 27359 32957 33519 23235 15559 23029 21777 23232 25335 22263 23170 27804 24075 27704 28600 28478 24511 30360 27780 31506 31769 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149310000 27870 1708 26180 52341;52342 42239 42239 1 9606 Homo sapiens 0.05799374398338841 TVEDVFLR Unmodified 977.5182 0.51819605 4341 Q96EL2 MRPS24 28S ribosomal protein S24, mitochondrial yes yes 0 0 0 4 0 1 54.216 54.232 2 0.010548 15902 20230619_1883_Aki_TMTPro18x_K_F4 98.458 63.634 204120 174030 177440 199790 186570 236210 205790 216270 237350 181900 184090 160940 176970 156980 196130 200000 191170 175900 188590 159540 182780 200130 193930 235580 207360 221350 237730 185160 190990 164380 181820 164300 198840 198950 182850 167380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199220000 27871 4341 26181 52343 42240 42240 1 9606 Homo sapiens 0.028537675519146433 TVEEAAAPR Unmodified 942.47706 0.47705951 3951 Q16566;B2R747 CAMK4 Calcium/calmodulin-dependent protein kinase type IV yes no 0 0 0 1.5 0.5 1 1 33.534 33.563 2 4.376E-05 7086 20230619_1881_Aki_TMTPro18x_K_F2 164.77 111.22 69135 51973 105500 88023 67427 81334 66735 83192 77092 83658 124990 132090 106670 107420 102160 55941 128980 107100 64173 47878 103450 85843 73005 82732 67848 84884 79803 85954 125220 130920 109330 108860 105160 60093 123000 101260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97838000 27872 3951 26182 52344;52345 42241 42241 1 9606 Homo sapiens 0.0035200651242348613 TVEELLETGLIQVATK Unmodified 1742.9666 0.96658119 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3;G3V4Y7;H0YJZ8 KTN1 Kinectin yes no 0 0 0 7 0.816 1 1 1 66.008 66.037 3 9.1487E-26 20524 20230619_1887_Aki_TMTPro18x_K_F7 226.93 206.5 65111 43721 52531 58927 37691 52265 48969 58219 67024 71024 79904 99981 95142 90305 70491 114770 101260 126180 60043 40183 54228 58170 40779 53459 49335 59412 67785 71964 82145 99861 95541 94717 74068 115430 96759 119640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 268520000 27873 380 26183 52346;52347;52348 42242 42242 1 9606 Homo sapiens 0.12481656435193145 TVEGVLIVHEHR Unmodified 1387.7572 0.75719754 416 B2R6U8;A0A024R6W2;O43809;H3BND3;Q5HYH5;H3BV41 NUDT21;DKFZp313O211 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 0 4.5 0.5 1 1 39.665 39.731 4 2.5302E-10 9436 20230619_1883_Aki_TMTPro18x_K_F4 161.99 99.581 115840 66055 94079 109240 108180 111490 112760 112150 155700 116690 126340 122400 144660 128260 113020 149160 109680 145980 106750 60910 97671 106730 111450 112550 114720 114660 154910 117970 131740 124280 145580 133190 115520 149280 105220 138550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 391910000 27874 416 26184 52349;52350 42243;42244 42243 2 9606 Homo sapiens 0.07882922783210233 TVEICPFSFDSR Unmodified 1456.6657 0.66566492 4088 Q643R0;Q9ULW0;Q9ULW0-2;B3KM90 HCTP4;TPX2 Targeting protein for Xklp2 yes no 0 0 0 6 0 1 60.021 60.083 2 1.1229E-17 18152 20230619_1886_Aki_TMTPro18x_K_F6 188.49 143.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27875 4088 26185 52351 42245 42245 1 9606 Homo sapiens -0.044401286962738595 TVEIVHIDIADR Unmodified 1379.7409 0.74087877 3601 P48739;P48739-2;P48739-3;B2R7P6;B3KYB6;B3KYB7 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 0 0 3.5 0.5 1 1 51.343 51.413 3 1.8302E-05 14782 20230619_1882_Aki_TMTPro18x_K_F3 126.1 92.872 73648 59378 72610 67939 65708 79927 75970 78572 92910 73542 64181 63243 71084 62576 77378 72042 73007 81083 68086 54442 73723 68102 69157 79871 76534 80204 92519 74324 67527 64654 72654 65095 78303 72766 69951 76887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 282790000 27876 3601 26186 52352;52353 42246;42247 42246 2 9606 Homo sapiens 0.06619796826475977 TVELLSGVVDQTK Unmodified 1387.7559 0.75586013 4002 Q53GR7;Q9UJS0;Q9UJS0-2;R4GN64;Q75KX8 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes no 0 0 0 6 0 1 60.984 61.042 3 1.4824E-18 18548 20230619_1886_Aki_TMTPro18x_K_F6 186.14 162.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27877 4002 26187 52354 42248 42248 1 9606 Homo sapiens 0.07749243903799652 TVENFCVHSR Unmodified 1247.5717 0.57170495 1443 F5H7P7;B4DT22;A0A384MTS1;Q96BP3;B4DP34;Q96BP3-2 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 yes no 0 0 0 6.5 0.5 1 1 36.655 36.723 3 4.1964E-14 8223 20230619_1886_Aki_TMTPro18x_K_F6 225.93 155.38 65996 45663 59571 63193 73898 75646 69238 71504 96119 76615 89893 86589 91267 68984 74942 82560 98191 80271 60917 41975 61276 62526 75518 75453 70908 73459 96085 77497 92530 86871 92292 72484 77809 82606 93600 76332 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109120000 27878 1443 26188 52355;52356 42249;42250 42249 2 9606 Homo sapiens -0.04217803007918519 TVENIKDPLFR Unmodified 1330.7245 0.72450043 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;Q6P2H7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 7.5 0.5 1 1 51.394 51.471 3 0.02895 14152 20230619_1888_Aki_TMTPro18x_K_F8 59.898 39.792 523260 514780 594700 629730 526900 607720 642240 588270 615450 762310 752640 667920 663710 535750 758420 607000 561470 521320 485000 471960 597440 626270 555530 615810 640250 607200 634520 757840 761580 677660 684120 560860 757850 604690 538830 496200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 654590000 27879 3881 26189 52357;52358 42251 42251 1 9606 Homo sapiens 0.07236715660337723 TVENVTVFGTASASK Unmodified 1509.7675 0.76748745 178 A0A024R1Z6;Q99536;Q99536-3;B3KUF8;Q99536-2;K7ENX2;K7EM19;K7ER81 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes no 0 0 0 5.33 3.09 1 1 1 52.964 53.013 3 1.7155E-10 14825 20230619_1888_Aki_TMTPro18x_K_F8 148.71 140.99 181330 160010 208340 215770 267640 255670 272600 289050 305510 229250 273800 275540 277460 232800 276360 293840 285290 322310 167960 146900 210320 213860 273040 256300 275570 291290 307840 236360 282640 276360 283010 244810 281640 295820 273130 305690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 955910000 27880 178 26190 52359;52360;52361 42252;42253 42253 2 9606 Homo sapiens 0.032994409271623226 TVEPLEYYR Unmodified 1168.5764 0.57643921 1760 A0A8I5KRX4;A0A8I5KRG4;A0A8I5KVC8;Q96B26;A0A8I5QJI7;Q5JXM0 EXOSC8;DKFZp564C0482 Exosome complex component RRP43 yes no 0 0 0 4.5 0.5 1 1 49.603 49.658 2 0.00078163 13807 20230619_1883_Aki_TMTPro18x_K_F4 143.45 104.3 161800 112820 139390 153550 128010 166700 141760 144950 166990 183880 182400 193140 208940 177550 171670 208780 203260 209200 149300 103690 143390 151840 134530 166980 142990 150630 169430 184030 187620 195090 210650 185310 177170 209230 194210 198670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126580000 27881 1760 26191 52362;52363 42254 42254 1 9606 Homo sapiens -0.0011059559349178016 TVEQTATTTNK Unmodified 1192.5935 0.59354583 3412 P08579;B5BTZ8 SNRPB2 U2 small nuclear ribonucleoprotein B'' yes no 0 0 0 4.5 0.5 1 1 36.653 36.745 3 0.0001544 8189 20230619_1885_Aki_TMTPro18x_K_F5 115.15 95.494 21774 10870 21370 23881 29378 35049 29113 29118 34457 26438 35596 36430 30773 27268 37200 16950 34477 34088 20081 10075 21884 23162 29902 34422 29528 30081 34804 27181 36276 36185 31864 27900 37449 18228 33011 32197 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28178000 27882 3412 26192 52364;52365 42255;42256 42256 2 9606 Homo sapiens 0.004952802216621421 TVESEAASYLDQISR Unmodified 1667.8002 0.80024414 180 V9HWJ8;A0A024R203;P61289;P61289-3;P61289-2;K9J957;Q6FHK7;B3KQ25;K7ESG5;J7FRP4;K7ENH2 HEL-S-283;PSME3 Proteasome activator complex subunit 3 yes no 0 0 0 4 0.816 1 1 1 61.516 61.543 3 2.9387E-33 18959 20230619_1883_Aki_TMTPro18x_K_F4 249.39 203.6 160330 144790 145860 166740 140470 174760 167170 161500 193510 164330 162240 161280 176540 149900 174590 188680 165750 177210 148240 132710 149450 166700 147260 175790 167800 166030 194330 165920 168590 163540 179630 157050 177160 188310 158760 168390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 489260000 27883 180 26193 52366;52367;52368 42257;42258;42259 42258 3 9606 Homo sapiens -0.006943967406868978 TVESITDIR Unmodified 1032.5451 0.54513908 783 B3KRY3;A0A024RDY3;P11279;Q59FZ0 LAMP1 Lysosome-associated membrane glycoprotein 1 yes no 0 0 0 3.5 0.5 1 1 47.198 47.258 2 3.369E-08 12905 20230619_1882_Aki_TMTPro18x_K_F3 205.36 127.62 572240 525020 541340 628180 663210 747600 705470 704250 793360 751810 826620 839710 792340 651210 749610 860560 819790 797910 529300 481350 554940 627420 680590 745910 711510 723690 804460 759900 845150 842210 807590 688940 767500 857630 783540 758610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 887430000 27884 783 26194 52369;52370 42260;42261 42260 2 9606 Homo sapiens 0.03016831372406159 TVESLEETLK Unmodified 1147.5972 0.59723423 131 F2Z3J9;A0A024R172;Q14914-2;Q14914 PTGR1;LTB4DH Prostaglandin reductase 1 yes no 0 0 0 3 0 1 56.635 56.672 3 5.3533E-06 17060 20230619_1882_Aki_TMTPro18x_K_F3 137.95 99.65 28520 25811 28971 29074 31679 36513 31447 33402 42832 38522 36241 43577 45381 41727 42042 53887 52486 51765 26393 23652 29434 29199 32715 36288 32076 34464 42740 38830 37947 43948 45909 43726 43450 53801 50112 49191 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162230000 27885 131 26195 52371 42262 42262 1 9606 Homo sapiens 0.029339499955085557 TVETLLLR Unmodified 943.57023 0.57023162 4531 Q9H845;Q9H9W4;H0Y8Z9;Q9BUX5;A0A7P0T8U3;A0A7P0T871;A0A7P0T7Z1 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 0 8 0 1 54.967 55.033 2 0.0020707 15735 20230619_1888_Aki_TMTPro18x_K_F8 132.57 25.138 259990 214040 234260 282330 259510 287410 306390 274140 319090 309940 320820 316980 327920 274220 359260 329200 317470 350330 240220 196510 240820 279480 268830 289920 306500 282080 324420 311550 329510 320040 335850 287250 362310 331230 304380 332400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 306100000 27886 4531 26196 52372 42263 42263 1 9606 Homo sapiens 0.09618930965677919 TVEVAEGEAVR Unmodified 1158.5881 0.58806652 567 A0A024R9D2;Q86UE4;E5RJU9;H0YB56 MTDH Protein LYRIC yes no 0 0 0 1 0 1 40.376 40.376 2 1.635E-06 10241 20230619_1880_Aki_TMTPro18x_K_F1 166.34 128.16 173940 136340 170080 184000 190030 201450 204370 207450 242730 206850 229820 260740 244700 196210 226910 261560 284830 268730 160770 125230 173480 182110 196170 202500 206420 211510 244490 210730 237270 260060 248430 207990 234430 262090 271860 255220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 207400000 27887 567 26197 52373 42264;42265 42265 2 9606 Homo sapiens 0.015116014298428126 TVEVLEPEVTK Unmodified 1242.6707 0.67073352 4154 Q7L576;X5D2F4;A0A087WVZ5;B3KWV6;A0A0G2JQT1;A0A0G2JR96;E7EVJ5;Q96F07;Q96F07-2;H7C229;B7Z8N7;A0A8V8TNU3;B7Z3H2;B7Z4I3;A0A087WU52;A0A087WWL1;A0A0G2JRV9;A0A087WVE1;A0A087WTQ3;A0A087WWZ1;A0A0G2JRX2 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 3.5 0.5 1 1 52.983 53.022 3 4.9317E-07 15488 20230619_1882_Aki_TMTPro18x_K_F3 138.76 101.21 131600 112030 126570 134100 139760 141950 144680 139200 180760 135360 136420 133910 146040 122960 142390 152230 144640 154270 121680 102740 129230 133730 144220 142930 146670 142320 180230 137060 142480 135690 148590 128770 145040 152590 138430 146470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 263140000 27888 4154 26198 52374;52375 42266 42266 1 9606 Homo sapiens 0.05910498437992828 TVEYAPCR Unmodified 994.45422 0.45421558 1811 B4DYQ7;A0A8V8TKU8;A0A8V8TKT8;A0A8V8TLW9;A0A8V8TKG0;A0A8V8TKI2;A0A8V8TLW4;L7RXH0;A5YM53;P06756-3;P06756-2;P06756;A0A8V8TKH9 ITGAV Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain yes no 0 0 0 4 0 1 36.889 36.933 2 0.030194 8308 20230619_1883_Aki_TMTPro18x_K_F4 87.323 74.363 36151 29253 38800 36533 54878 41697 45549 49041 54058 32281 44311 43380 33140 31557 49978 26548 41982 34076 33446 26843 39398 36384 55331 41985 46731 49132 54117 33878 45458 43130 34995 32663 49949 27264 40191 32315 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16335000 27889 1811 26199 52376 42267 42267 1 9606 Homo sapiens -0.04323335876688361 TVEYLHAQGVVHR Unmodified 1507.7896 0.7895603 1408 B1AXG1;P51812;A0A384MDW3;B7ZB17;B4DG22;B4DKZ2 RPS6KA3 Ribosomal protein S6 kinase alpha-3 yes no 0 0 0 7 0 1 37.556 37.621 4 2.8385E-05 8329 20230619_1887_Aki_TMTPro18x_K_F7 118.61 93.731 42267 25502 43652 39352 55029 63267 55128 48559 68863 32275 45000 40857 39325 34753 49838 40712 43532 37110 39029 23488 44383 38897 56295 61788 55961 50196 68280 33841 47039 40930 40830 36344 50093 40651 41668 35309 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74694000 27890 1408 26200 52377 42268 42268 1 9606 Homo sapiens 0.05597710186202676 TVEYLHSQGVVHR Unmodified 1523.7845 0.78447492 2680 B7Z2K7;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q5SVM6 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 yes no 0 0 0 7 0 1 36.045 36.112 4 3.412599999999999E-21 7732 20230619_1887_Aki_TMTPro18x_K_F7 225.63 188.2 21834 15502 22232 20585 22239 23878 24617 23461 30450 28818 29853 31644 35409 27206 28248 30080 36842 30991 20176 14242 22541 20418 23164 23886 24863 24140 30671 28928 30906 31834 35610 28375 29330 30231 35126 29447 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35647000 27891 2680 26201 52378 42269 42269 1 9606 Homo sapiens 0.043534063235711074 TVFAEHISDECK Unmodified 1434.6449 0.64492948 3567;2399 B3KS36;B4DN06;F8WCR1;P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;B5MCW2;H7C422;H7C3M2 RPL3;rpl3 60S ribosomal protein L3 no no 0 0 0 5.5 0.5 1 1 45.267 45.353 3 1.3887E-05 11849 20230619_1886_Aki_TMTPro18x_K_F6 130.99 111.35 79513 67603 81344 79355 61028 86605 69689 77085 106440 97356 93086 79764 117200 95300 74374 132580 131730 122270 73555 61985 82171 79290 65453 86774 70951 79922 105830 96842 97029 82437 116860 99797 79864 131870 125420 116280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128380000 27892 2399;3567 26202 52379;52380 42270;42271 42271 2 9606 Homo sapiens -0.05500719075939742 TVFAEHISDECKR Unmodified 1590.746 0.7460405 3567;2399 B3KS36;B4DN06;F8WCR1;P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;B5MCW2;H7C422;H7C3M2 RPL3;rpl3 60S ribosomal protein L3 no no 0 0 1 8 0 1 40.937 40.929 4 0.011137 9866 20230619_1888_Aki_TMTPro18x_K_F8 67.93 43.643 61721 56272 66433 62849 62861 72357 76736 72758 67338 70256 62518 54628 74868 53367 57296 70509 69079 53711 57149 51559 67030 63092 65916 72462 76284 74228 68992 70647 64857 56166 75123 56036 59288 69608 65874 51249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34422000 27893 2399;3567 26203 52381 42272 42272 1 9606 Homo sapiens -0.025702673732439507 TVFDEAIR Unmodified 949.4869 0.48689592 1881;3680 A4D2P1;A4D2P0;A0A994J6T1;P63000;P63000-2;A4D2P2;A0A024R9T5;A0A024R1P2;P15153;B1AH77;B1AH80;P60763;J3KSC4;J3QLK0 RAC1;hCG_20693;RAC2;RAC3 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2;Ras-related C3 botulinum toxin substrate 3 no no 0 0 0 4 0 1 49.168 49.206 2 2.8022E-07 13606 20230619_1883_Aki_TMTPro18x_K_F4 157.58 88.195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27894 1881;3680 26204 52382 42273 42273 1 9606 Homo sapiens 0.010131945177931811 TVFFESLER Unmodified 1126.5659 0.56587452 1889 A1LT96;A0AVT1;B3KSS1;A0AVT1-3;A0AVT1-4 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 0 5.5 0.5 1 1 58.395 58.458 2 6.1215E-06 17280 20230619_1885_Aki_TMTPro18x_K_F5 181.69 152.33 102310 90668 98499 102840 101080 114730 110680 109850 126680 126660 112600 110870 114650 107100 123860 135340 120880 129300 94627 83094 100450 103050 105100 115020 111540 113000 127650 126640 116310 113160 117460 112070 125690 135180 115750 122840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111080000 27895 1889 26205 52383;52384 42274 42274 1 9606 Homo sapiens 0.007654217520894235 TVFGVEPDLTR Unmodified 1232.6401 0.6401021 2598 Q96KP4;B4DV28;Q96KP4-2;B4DPF1;Q9NW02;Q9NUV1 CNDP2 Cytosolic non-specific dipeptidase yes no 0 0 0 5 0 1 54.812 54.879 2 0.00026095 15789 20230619_1885_Aki_TMTPro18x_K_F5 123.96 95.702 123800 103600 122310 122500 107440 113260 133860 122670 141210 212750 233850 232000 255020 238280 197080 240500 265480 264880 114480 95004 124150 122090 113430 115510 133750 127120 147380 210680 236420 234830 257010 245640 205430 242900 253340 251330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84885000 27896 2598 26206 52385 42275 42275 1 9606 Homo sapiens 0.03308764843586687 TVFSADPNVVDLHK Unmodified 1540.7886 0.78855725 1134 A0A0S2Z5L0;A0A0S2Z5P2;Q9BRX5;Q9BRX5-3 GINS3 DNA replication complex GINS protein PSF3 yes no 0 0 0 7 0 1 53.644 53.711 3 2.5544E-17 15225 20230619_1887_Aki_TMTPro18x_K_F7 216.54 191.75 95427 81955 87437 93918 91903 110630 95557 93024 111870 107980 100120 105350 128470 107290 110760 118800 103250 118210 88205 75125 89600 94087 95319 110200 96644 96657 112640 108300 104560 107130 129350 111240 112570 119150 98967 112220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132010000 27897 1134 26207 52386 42276 42276 1 9606 Homo sapiens 0.03979451026634706 TVFVGNLPVTCNK Unmodified 1447.7493 0.74933497 1470 A0A384NL74;P42696;A2A2V2;P42696-2 RBM34 RNA-binding protein 34 yes no 0 0 0 3.5 0.5 1 1 56.13 56.153 3 0.00013235 16841 20230619_1882_Aki_TMTPro18x_K_F3 96.866 79.84 82545 92419 101650 94624 151140 180130 141250 135690 170360 116300 99052 101040 113790 82596 101320 121520 118930 121890 76649 84561 102420 96520 152890 174620 143780 141080 168990 118250 105650 102670 115040 87957 104330 121430 113640 115750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102760000 27898 1470 26208 52387;52388 42277 42277 1 9606 Homo sapiens 0.043370274714561674 TVFVVDHCPYMAESCR Oxidation (M) 1985.8434 0.84338806 4605 Q9NVM9;F5H5W1;F5H457 ASUN Protein asunder homolog yes no 0 1 0 5 0 1 45.443 45.521 3 0.055233 11851 20230619_1885_Aki_TMTPro18x_K_F5 45.723 34.779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27899 4605 26209 52389 42278 42278 2823 1 9606 Homo sapiens -0.11009989550871069 TVGALQVLGTEAQSSLLK Unmodified 1814.0149 0.014928368 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 2 0 1 63.144 63.153 3 2.216E-09 20072 20230619_1881_Aki_TMTPro18x_K_F2 123.63 110.5 31617 24328 23778 29647 24758 29876 26856 32807 39679 37907 33765 35690 48387 35006 45071 46925 37106 45811 29164 22323 24858 29505 25762 30255 27362 33429 39486 37975 35580 36321 48711 36796 45463 46894 35640 43491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221250000 27900 3758 26210 52390 42279 42279 1 9606 Homo sapiens 0.1404815007513207 TVGATALPR Unmodified 884.50797 0.50796571 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 7.5 0.5 1 1 39.298 39.323 2 0.00079402 8970 20230619_1887_Aki_TMTPro18x_K_F7 123.16 84.349 118880 90025 101630 117850 127360 131010 122750 118040 150740 129220 135040 127040 131690 100360 124990 145960 141470 117290 109740 82671 105150 116870 130140 131200 124870 121800 151320 129970 139090 128230 134140 106820 128230 144280 135030 111800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1531299999.9999998 27901 3621 26211 52391;52392 42280 42280 1 9606 Homo sapiens 0.061092046173257586 TVGHSVVSPQDTVQR Unmodified 1608.822 0.82198264 165 A0A024R1U5;Q92871 PMM1 Phosphomannomutase;Phosphomannomutase 1 yes no 0 0 0 6 0 1 35.289 35.342 3 5.8907E-11 7769 20230619_1886_Aki_TMTPro18x_K_F6 141.34 117.05 10450 9514.6 10816 13079 17241 18022 15336 14524 18893 14025 16707 19259 19153 17186 14997 15347 21044 17681 9672.8 8736 11068 12970 17344 17767 15674 15069 18947 14375 17365 19233 19285 17694 15656 15586 20053 16781 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20597000 27902 165 26212 52393 42281 42281 1 9606 Homo sapiens 0.04192452798565682 TVGLQSR Unmodified 759.4239 0.42390173 1271 A0A1B0GV93;B4DWS6;B3KQJ0;Q53GQ0;D3DR22 HSD17B12 Very-long-chain 3-oxoacyl-CoA reductase yes no 0 0 0 6 0.816 1 1 1 33.832 33.903 2 0.076663 7215 20230619_1886_Aki_TMTPro18x_K_F6 74.184 13.676 33347 22239 42741 37876 45361 49220 42473 49656 52618 28390 45553 44729 34808 35578 47530 21047 53424 41759 30871 20499 42644 37107 46814 48888 43334 50109 52633 30361 46616 44348 36522 36226 48278 22636 50978 39486 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59660000 27903 1271 26213 52394;52395;52396 42282 42282 1 9606 Homo sapiens 0.03456673520418008 TVGMLSNMIAFYDMAR Unmodified 1818.8467 0.84668253 3566 P38606-2;P38606;B7Z2V6;A0A994J477 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 0 5 0 1 65.495 65.539 3 0.00039701 20392 20230619_1885_Aki_TMTPro18x_K_F5 82.349 65.664 18399 16352 19007 21876 18971 25794 20717 21513 19541 22523 22039 24988 25480 24395 23967 27040 27426 32961 17027 15010 19280 21679 19785 25670 20762 22301 20095 22781 22671 25231 25846 25321 24607 27451 26246 31223 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17123000 27904 3566 26214 52397 42283 42283 1 9606 Homo sapiens -0.029986947062297986 TVGQLYK Unmodified 807.44905 0.44905385 148;3549;1719;4165 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1;A0A7R6KYT5;P35749-2;P35749;P35749-3;B1PS43;P35749-4;A0A024QZJ4;A0A024QZJ6;P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43;B3KWH4 MYH9;MYH11;MYH10;MYH14 Myosin-9;Myosin-11;Myosin-10;Myosin-14 no no 0 0 0 1.5 0.5 1 1 45.453 45.494 2 0.007007 12501 20230619_1880_Aki_TMTPro18x_K_F1 128.57 44.322 464780 330550 391630 411980 508860 608250 550500 516560 748810 542700 551820 523400 533310 446730 533420 587830 634590 512090 428860 303470 405950 411860 521280 597870 558320 534610 743120 547040 574450 529830 545080 470740 548250 584090 605340 487630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 330300000 27905 148;1719;3549;4165 26215 52398;52399 42284;42285 42284 2 9606 Homo sapiens 0.03762728322988096 TVGTPIASVPGSTNTGTVPGSEK Unmodified 2156.0961 0.096091815 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0;A0A7I2YQI9;A0A7I2V491;A0A7I2V4A5;H7BZR6 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 7 0 1 51.051 51.129 3 0.00055202 14095 20230619_1887_Aki_TMTPro18x_K_F7 68.291 57.236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27906 832 26216 52400 42286 42286 1 9606 Homo sapiens 0.06428761256483995 TVGVEPAADGK Unmodified 1042.5295 0.52948901 3051 H0YKD8;P46779;P46779-2;P46779-3;Q59F34;H0YMF4;P46779-4;P46779-5;H0YLP6 RPL28 60S ribosomal protein L28 yes no 0 0 0 3.33 0.471 2 1 41.821 41.877 2;3 5.9649E-09 10391 20230619_1882_Aki_TMTPro18x_K_F3 218.6 170.86 411780 236550 499310 508070 591070 681570 563170 624660 635370 530130 663350 719200 761890 663150 562910 420350 808890 732570 380720 218990 501420 492540 605970 674060 571940 639330 644020 546790 683760 719040 765250 673400 588560 444400 771040 692770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1365200000 27907 3051 26217 52401;52402;52403 42287;42288 42287 2 9606 Homo sapiens 0.009925448553758542 TVGVQGDCR Unmodified 990.45528 0.45527821 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 3 0.816 1 1 1 31.85 31.917 2 9.6702E-05 6323 20230619_1882_Aki_TMTPro18x_K_F3 177.3 145.24 75669 39320 91466 77656 123230 134600 93960 118570 96641 63381 91015 98484 88119 78766 91994 41029 101460 80117 69931 36371 91983 75973 124640 131320 96611 120650 97979 68109 93598 97651 90237 79920 93697 44216 96835 75760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86963000 27908 1182 26218 52404;52405;52406 42289;42290 42289 2 9606 Homo sapiens -0.04033121507779924 TVHNLYLFDR Unmodified 1276.6564 0.65642086 2280 I3L3S0;B2RA50;Q9Y5R8;I3L1R8;I3L3V5 TRAPPC1 Trafficking protein particle complex subunit 1 yes no 0 0 0 1 0 1 48.5 48.5 3 0.050684 13743 20230619_1880_Aki_TMTPro18x_K_F1 55.718 32.888 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27909 2280 26219 52407 42291 42291 1 9606 Homo sapiens 0.029158908003637407 TVHSYLEK Unmodified 975.50255 0.50254598 3977 Q68DW7;Q4LE48;Q8WVM7-2;Q8WVM7;B4E2Q7 DKFZp781D1416;STAG1 variant protein;STAG1 Cohesin subunit SA-1 yes no 0 0 0 7.5 0.5 1 1 40.248 40.275 3 0.00023612 9361 20230619_1887_Aki_TMTPro18x_K_F7 140.35 86.196 124940 79946 105710 124400 147730 150590 141270 137830 188820 131200 149000 131370 148940 126740 122680 169910 163850 165400 115220 73618 109720 122230 149980 149960 144200 141500 187890 133100 154580 133370 150830 133170 127750 169640 156380 157140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74537000 27910 3977 26220 52408;52409 42292 42292 1 9606 Homo sapiens 0.013814810348435458 TVHTEWTQR Unmodified 1156.5625 0.56252048 2754 C9JIF9;P13798;H7C393 APEH Acylamino-acid-releasing enzyme yes no 0 0 0 5.5 0.5 1 1 33.844 33.907 3 1.2931E-08 7207 20230619_1886_Aki_TMTPro18x_K_F6 200.6 141.93 35414 28815 33527 30933 36862 43070 39995 37110 43178 42447 44647 47879 43408 40597 44758 42197 53456 47081 32731 26403 34255 31240 38131 42498 40240 38464 43869 42784 45717 48088 44440 42189 45951 42667 51018 44689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80951000 27911 2754 26221 52410;52411 42293 42293 1 9606 Homo sapiens -0.009498283019183873 TVIDYNGER Unmodified 1065.5091 0.50908792 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;I3L0S0;Q96C96;B3KTQ9 P4HB Protein disulfide-isomerase yes no 0 0 0 3 0 1 40.782 40.841 2 4.255E-05 9935 20230619_1882_Aki_TMTPro18x_K_F3 182.76 149.41 190080 153870 168880 178950 228820 256640 223410 237670 290010 239470 264310 290370 282590 222450 251100 271220 286330 266660 175590 141100 174310 179700 232980 253170 227580 244050 290530 243540 273340 290110 286250 234300 257930 271480 273480 253390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 359200000 27912 537 26222 52412 42294 42294 1 9606 Homo sapiens -0.021046258044407296 TVIGELPPASSGSALAANVCK Unmodified 2041.0514 0.051390229 2126 A8K8U1;Q86VP6;Q86VP6-2 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 4.5 3.5 1 1 58.306 58.33 3 2.1131E-11 17773 20230619_1880_Aki_TMTPro18x_K_F1 122.22 105.34 69528 62637 72323 69523 70084 74377 80713 78222 83612 91381 81779 86840 92581 80359 74993 115120 93590 104520 64353 57390 73186 69754 73212 74962 80867 79994 85020 91490 84492 88176 93345 84928 77823 114410 89442 99348 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 468010000 27913 2126 26223 52413;52414 42295;42296 42295 2 9606 Homo sapiens 0.0725065890951555 TVIIEQSWGSPK Unmodified 1343.7085 0.70851601 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;A0A7I2YQK6;A0A7I2V5M1;A0A7I2V5K3;A0A7I2V369;A0A7I2YQ71;Q53SE2;E7ESH4;E7EXB4;A0A0S2Z415;P10809-2;C9JL25;C9JCQ4;C9JL19 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 3.33 3.3 2 1 55.53 55.561 2;3 1.3491E-13 15954 20230619_1888_Aki_TMTPro18x_K_F8 256.48 205.41 535880 496500 525520 548640 523970 620460 613380 647860 673680 682520 614860 603140 689420 575790 628010 704420 629570 648550 495850 454850 534920 550980 547110 622620 615250 660630 680920 685440 636860 615060 698260 601720 640200 702510 602490 616520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2224000000 27914 272 26224 52415;52416;52417 42297;42298;42299 42299 3 9606 Homo sapiens 0.05041009423462128 TVIIGEQEHR Unmodified 1180.62 0.62003536 1142 B3KWN7;A0A0S2Z5Y8;A0A0S2Z5T8;B4DS11;Q86WG3;Q86WG3-3 ATCAY Caytaxin yes no 0 0 0 2.5 0.5 1 1 35.87 35.926 3 1.7275E-10 7926 20230619_1882_Aki_TMTPro18x_K_F3 185.96 123.66 22381 18378 21300 20106 23147 25769 24811 26056 29536 23849 32917 30255 27922 27378 29545 24335 33746 28909 20687 16842 21749 20251 23951 25638 25073 26533 29918 24426 33380 30335 28759 28161 30215 24783 32214 27427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84176000 27915 1142 26225 52418;52419 42300 42300 1 9606 Homo sapiens 0.03695013903643485 TVIIHDRPDITHPR Unmodified 1668.906 0.90598704 4613 Q9NWH9;H7C3F4;A0A024R5U7;A0A024R5X3;Q9NWH9-3 SLTM SAFB-like transcription modulator yes no 0 0 1 7 0 1 35.398 35.469 4 6.1294E-09 7508 20230619_1887_Aki_TMTPro18x_K_F7 166.09 125.59 21403 15176 28825 31463 36649 35157 29530 34542 29418 28278 32435 29873 25783 20611 35501 21478 28564 21683 19831 14027 28788 30453 37189 35239 30211 35150 30100 28948 32850 29937 26967 21616 35465 21633 27349 20617 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24893000 27916 4613 26226 52420 42301 42301 1 9606 Homo sapiens 0.09829028686135644 TVINFTMPNTIK Oxidation (M) 1393.7275 0.72753689 2338 B7Z6D5;B3GQE6;Q96GQ7 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 1 0 3 0 1 55.689 55.73 3 0.0004427 16697 20230619_1882_Aki_TMTPro18x_K_F3 93.011 73.953 60909 53337 63966 68128 66498 73403 72057 69548 79240 75971 71614 64621 71041 57915 78181 72489 73246 76747 56369 48940 64790 67651 69010 73736 72554 71492 80032 76097 73791 65907 72843 60769 79071 72866 70153 72837 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58851000 27917 2338 26227 52421 42302 42302 1457 1 9606 Homo sapiens 0.0464222272285042 TVINFTMPNTIK Unmodified 1377.7326 0.73262227 2338 B7Z6D5;B3GQE6;Q96GQ7 DDX27 Probable ATP-dependent RNA helicase DDX27 yes no 0 0 0 4 0 1 61.26 61.263 3 1.5375E-05 18844 20230619_1883_Aki_TMTPro18x_K_F4 129.34 99.137 50712 47132 59845 59071 55904 68303 59611 63475 76547 64985 59252 68869 71610 64157 68479 78733 82000 83190 47001 43229 59975 58800 58533 68237 60431 65208 76335 65745 62224 69569 72597 67100 70490 79102 78334 78963 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60769000 27918 2338 26227 52422 42303 42303 1 9606 Homo sapiens 0.05886526585481988 TVIPGMPTVIPPGLTR Unmodified 1647.9382 0.93819837 322 Q15637-6;A0A024R566;B4DJU4;Q15637;Q15637-2;Q15637-3;Q15637-4;A0A024R572;A0A024R588;A0A024R5D9;Q15637-5;A0A7P0T9U7;Q15637-7;Q14820;F8WEV5;C9J792 SF1 Splicing factor 1 yes no 0 0 0 5.5 0.5 2 2 62.596 62.645 2;3 2.2244E-08 19128 20230619_1885_Aki_TMTPro18x_K_F5 164.11 126.55 310700 239470 254800 321360 243760 323240 324080 327850 366350 365650 326130 272700 365710 328400 316100 352450 363340 378500 286770 219950 263820 317710 256810 326630 323370 335590 369340 364780 337860 283120 369810 338290 325110 355150 347290 359170 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 797010000 27919 322 26228 52423;52424;52425;52426 42304;42305;42306 42305 3 9606 Homo sapiens 0.14014680044897432 TVIQSLTMYPR Unmodified 1307.6908 0.69075746 108 B7Z6F7;A0A024R0R6;Q92797 SYMPK Symplekin yes no 0 0 0 5 0 1 56.951 57.012 2 0.0008174 16662 20230619_1885_Aki_TMTPro18x_K_F5 107.11 81.175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27920 108 26229 52427 42307 42307 1 9606 Homo sapiens 0.049219708969530984 TVISQSLSK Unmodified 961.54441 0.5444108 3566 P38606-2;P38606;A0A994J738 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 0 2 0 1 47.104 47.179 2 4.2615E-08 13140 20230619_1881_Aki_TMTPro18x_K_F2 223.84 67.961 278310 214820 229070 243800 268650 302390 281650 271030 390670 98790 92009 74476 95842 73153 190150 103750 112720 75587 256880 196980 237490 244640 276640 300590 286300 274490 378960 108940 108710 76921 102220 77139 186930 102480 108340 72228 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79736000 27921 3566 26230 52428 42308 42308 1 9606 Homo sapiens 0.062100367233938414 TVISSGGEER Unmodified 1033.504 0.50400254 1783 A0A8I5KXR3;Q03164-2;Q03164;Q03164-3;A0A3B3ITT7;A0A8I5KQV5;A0A8I5KY70;A0A8I5KQ03 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 0 0 0 2 0 1 33.8 33.857 2 0.0029282 7212 20230619_1881_Aki_TMTPro18x_K_F2 99.257 70.17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27922 1783 26231 52429 42309 42309 1 9606 Homo sapiens -0.011409296670308322 TVITEEFKVPDK Unmodified 1404.75 0.75004648 507 A0A024R8A7;Q96I24;Q96I24-2 hCG_31253;FUBP3 Far upstream element-binding protein 3 yes no 0 0 1 6.5 0.5 1 1 53.847 53.919 3 2.6871E-05 15560 20230619_1886_Aki_TMTPro18x_K_F6 124.42 86.866 544570 477390 542250 553770 501540 614310 590140 612220 668960 653940 625490 572740 671470 503270 633090 584060 535280 511950 503750 437620 550580 553950 527080 616480 592500 626540 675460 656170 645520 582780 681370 525990 638770 581870 512940 487100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1109100000 27923 507 26232 52430;52431 42310;42311 42310 2 9606 Homo sapiens 0.06386145392139042 TVIVHGFTLGEK Unmodified 1299.7187 0.71868677 2081 A8K5W7;Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 0 1.5 0.5 1 1 52.101 52.14 3 4.7664E-07 15409 20230619_1881_Aki_TMTPro18x_K_F2 152.31 123.22 165810 141510 157990 179090 152010 180160 182430 207730 187970 198740 210910 202880 216240 182420 218670 245260 208100 222440 153300 129850 161210 177800 159270 182680 182460 209990 192140 201360 215540 205230 220600 192140 221890 244100 199310 211460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 226300000 27924 2081 26233 52432;52433 42312;42313 42313 2 9606 Homo sapiens 0.08081617148718578 TVIVNMVDVAK Unmodified 1187.6584 0.6583947 406 A0A024R6Q1;P55010;Q6IBU0;H0YLZ1;Q32Q19;Q05DF3;H0YN40;H0YMJ8;H0YM54;H0YK29;H0YK11 EIF5 Eukaryotic translation initiation factor 5 yes no 0 0 0 4.5 3.5 1 1 59.567 59.587 2;3 8.7695E-06 17613 20230619_1888_Aki_TMTPro18x_K_F8 168.3 114.53 88921 79156 85203 96671 86419 106320 97460 97129 104120 105740 104030 120290 119030 106870 124140 126100 122730 125670 82239 72594 86966 96302 90053 106550 97848 100110 105740 106840 107560 120970 121290 111660 126070 126390 117460 119350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88859000 27925 406 26234 52434;52435 42314;42315 42315 2 9606 Homo sapiens 0.07207183493960656 TVIVTPSQR Unmodified 999.57129 0.57129425 1445 Q6IB91;A0A384MTT2;Q16822;A0A0S2Z430;H0YM31;Q16822-2;A0A0S2Z451 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 1 0 1 39.107 39.107 2 0.0055191 9711 20230619_1880_Aki_TMTPro18x_K_F1 93.267 69.838 75226 57333 65543 59186 59276 70892 75611 78857 85011 74533 100370 132820 84947 82047 115760 84145 101440 124600 69456 52530 67265 59839 62577 70986 75610 79898 86582 77287 101870 130330 88695 86382 116220 86890 97360 117830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122130000 27926 1445 26235 52436 42316 42316 1 9606 Homo sapiens 0.07149145334574314 TVLAAAYGEK Unmodified 1021.5444 0.5444108 2332 B2RWN5;Q5T3Q7;Q9H583;B4E263;B3KWS1;Q8N7L7 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 7.67 0.471 1 2 50.282 50.36 2;3 0.0018453 13687 20230619_1888_Aki_TMTPro18x_K_F8 113.93 70.119 341970 243150 275790 341240 302440 285820 331520 330550 358740 284200 303430 277770 315430 225400 311630 334310 325010 309150 315450 223520 286390 335730 312590 294310 333390 333500 361500 289540 314340 280790 321120 240170 317810 332710 310730 293960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 182750000 27927 2332 26236 52437;52438;52439 42317;42318;42319 42319 3 9606 Homo sapiens 0.03450036723370431 TVLCGTCGQPADK Unmodified 1405.633 0.63298458 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-4;P02545-5 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 6.5 0.5 1 1 43.336 43.423 2 2.72E-15 10953 20230619_1886_Aki_TMTPro18x_K_F6 244.95 202.35 58296 37470 45217 57754 85209 87507 91120 88658 118100 66993 79715 82964 85069 65801 67036 85993 86097 83684 53732 34499 47721 57007 85515 86224 92249 89884 117070 69442 83826 82965 85788 69521 69640 85905 82176 79516 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113170000 27928 1428 26237 52440;52441 42320;42321 42320 2 9606 Homo sapiens -0.053606590907747886 TVLDPVTGDLSDTR Unmodified 1487.7468 0.74675201 3931 Q15393;A8K6V3;B3KQH1 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 2.5 0.5 1 1 53.773 53.813 2;3 2.1387E-28 16102 20230619_1881_Aki_TMTPro18x_K_F2 253.97 226.39 110950 95143 97821 113110 107510 129500 116510 112560 136870 123730 125430 115720 133120 108300 128110 132850 125480 132310 102520 87245 100720 112950 111290 129300 117570 116470 137810 124260 129510 117640 135340 113300 130250 133070 120130 125640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 351540000 27929 3931 26238 52442;52443 42322;42323 42322 2 9606 Homo sapiens 0.022388505474509657 TVLDQQQTPSR Unmodified 1271.647 0.64697839 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJA1;A0A804HKK7;A0A804HKX6 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 4.5 0.5 1 1 37.075 37.143 2 3.4514999999999997E-23 8324 20230619_1885_Aki_TMTPro18x_K_F5 259.34 225.89 293500 226990 239890 272310 305750 302610 308110 299120 381720 327840 374480 397940 387440 320260 339420 385060 419420 382550 270890 208240 249300 271690 312400 303750 312720 306640 384250 332010 385230 398150 392740 336310 350640 385670 400270 363510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 892460000 27930 1723 26239 52444;52445 42324;42325 42325 2 9606 Homo sapiens 0.022020777241777978 TVLELQYVLDK Unmodified 1319.7337 0.73366813 3890 Q14444-2;Q14444;G3V153;B3KXU8;E9PLA9 CAPRIN1 Caprin-1 yes no 0 0 0 7 0 1 63.248 63.281 3 5.1967E-09 19319 20230619_1887_Aki_TMTPro18x_K_F7 174.4 154.41 546500 460380 515140 608500 460940 563370 540560 575890 611250 679390 629580 650280 708970 589600 565110 748640 631560 750540 505190 422650 525690 601610 485770 573220 542880 590260 619970 680010 648580 659420 714140 618740 581920 749290 604450 712410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 609600000 27931 3890 26240 52446 42326 42326 1 9606 Homo sapiens 0.08659064226026203 TVLEQVLPI Unmodified 1010.6012 0.60119739 3503 Q6FI51;Q6FHS4;P25685;A0A7I2V3K7;P25685-2;B4DKK9;A0A7I2YQW1 DNAJB1 DnaJ homolog subfamily B member 1 yes no 0 0 0 6 0.816 1 1 1 65.62 65.658 2 0.00076064 20367 20230619_1887_Aki_TMTPro18x_K_F7 124.34 111.99 103380 98078 95970 114220 103500 132440 113540 104700 121440 125990 133440 129280 132690 121440 136020 155080 133610 153550 95632 89887 98357 114230 107340 131880 114140 109490 123780 126320 136320 130900 135650 127270 138240 155150 128000 145790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 809590000 27932 3503 26241 52447;52448;52449 42327;42328;42329 42329 3 9606 Homo sapiens 0.09632084279917308 TVLFTNAR Unmodified 920.50797 0.50796571 3579 P42285;A8K6I4;B4E3M6 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 0 0 3 0 1 45.538 45.614 2 0.016901 12083 20230619_1882_Aki_TMTPro18x_K_F3 91.783 58.338 339060 265220 304560 317230 359890 423130 358870 368850 452720 232370 246110 246540 261370 216050 308730 213810 317810 280700 313170 243300 313190 317480 369850 418480 364660 376850 446980 243040 263050 248660 268600 223900 313040 218950 303730 266040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202610000 27933 3579 26242 52450 42330 42330 1 9606 Homo sapiens 0.0445320461733445 TVLGTPEVLLGALPGAGGTQR Unmodified 2006.116 0.1160394 2908 E9KL44;H0YFD6;P40939;A0A2R8YG21;A0A2R8Y688 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 2.5 0.5 1 1 63.451 63.471 3 2.4618E-30 19865 20230619_1882_Aki_TMTPro18x_K_F3 211.33 182.43 68598 49691 58439 75556 64045 71941 70417 79891 79398 82910 80982 89687 91370 68525 84261 91323 87212 105340 63308 45719 60399 74087 66293 73168 70935 81134 80488 83794 83534 90002 92521 72654 86015 92158 83540 99841 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1781299999.9999998 27934 2908 26243 52451;52452 42331;42332 42332 2 9606 Homo sapiens 0.1532260177777971 TVLIACNVK Unmodified 1016.5689 0.56885141 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 2 0 1 50.06 50.112 2 0.0078592 14520 20230619_1881_Aki_TMTPro18x_K_F2 104.06 33.725 179920 146700 165810 171250 184300 214290 190740 177530 236670 127410 129360 214350 247190 116910 514860 203180 206870 126600 166260 134530 169930 171500 190330 212560 193260 182670 234020 134250 144190 210210 260380 128570 500050 199540 200350 121350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72556000 27935 1104 26244 52453 42333 42333 1 9606 Homo sapiens 0.06122973605260995 TVLIHCPEK Unmodified 1095.5747 0.57466507 4609 Q9NVV4;Q5T851;Q5T852 MTPAP Poly(A) RNA polymerase, mitochondrial no no 0 0 0 7.5 0.5 1 1 41.787 41.821 3 0.0007851 9994 20230619_1887_Aki_TMTPro18x_K_F7 103.26 63.633 69465 57655 60551 67492 76386 84651 82964 74132 85187 76182 84234 75235 82991 69811 75205 89491 78681 74230 64170 52867 62543 67573 78275 84062 83302 76530 86592 76885 86356 76305 84364 73211 76882 88726 75217 70682 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73954000 27936 4609 26245 52454;52455 42334 42334 1 9606 Homo sapiens 0.030700721169068856 TVLIMELINNVAK Oxidation (M) 1472.8273 0.82725094 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079;F8W0P7;H0YI37 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 1 0 3.5 0.5 1 1 65.129 65.15 3 0.00088911 20451 20230619_1883_Aki_TMTPro18x_K_F4 83.314 64.485 7961.3 5781.3 5260.1 8172.5 9578.7 9770.3 8541.7 7273.4 9868.3 7377.6 9082.9 8465.4 8671.7 8824 10500 12134 9294.5 10767 7335.7 5314.5 5650.2 8067.9 9582.1 9701.2 8705.1 7611.9 9938.7 7493.9 9338.8 8571.1 8960.1 9255.7 10588 12058 8914.8 10236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166810000 27937 3391 26246 52456;52457 42335 42335 2005 1 9606 Homo sapiens 0.10975040336825259 TVLIMELINNVAK Unmodified 1456.8323 0.83233632 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079;F8W0P7;H0YI37 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 4.5 0.5 1 1 66.411 66.439 2 0.0011839 20982 20230619_1883_Aki_TMTPro18x_K_F4 114.5 89.573 10075 8182.2 10709 8919.8 8319.3 11109 10759 8622 13252 12291 13204 12664 11193 13593 12763 12946 11045 14968 9320.1 7498.4 10781 8981.9 8912.5 11009 10782 9083.8 13350 12247 13461 12870 11587 13942 12859 13135 10612 14180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10139000 27938 3391 26246 52458;52459 42336 42336 1 9606 Homo sapiens 0.1221934419943409 TVLLLADQMISR Unmodified 1358.7592 0.75917137 2398;544 Q5U045;Q53EZ1;B3KRV2;P49674;H0Y645;B0QY35;B0QY34;A0A669KBC0;J3QQI9;B0QY36;H0Y2N6;B4E0G1;A0A024R8X3;H7BYT1;P48730-2;P48730 CSNK1E;CSNK1D Casein kinase I isoform epsilon;Casein kinase I isoform delta no no 0 0 0 2 0 1 63.698 63.706 2 0.0041834 20267 20230619_1881_Aki_TMTPro18x_K_F2 105.13 70.602 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27939 2398;544 26247 52460 42337 42337 1 9606 Homo sapiens 0.09414215476795107 TVLPFSQEFQR Unmodified 1350.6932 0.6932003 4154 Q7L576;X5D2F4;A0A087WVZ5;B3KWV6;Q7L576-2;B3KWT5;Q7L576-3 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 1 0 1 57.736 57.736 2 1.0849E-12 17568 20230619_1880_Aki_TMTPro18x_K_F1 215.96 185.22 98159 78328 96152 90197 83317 99961 92477 101360 111840 103580 99155 97947 98378 96132 115210 125080 107610 112630 90736 71822 97613 90293 87900 100370 93368 103480 112330 104410 102340 99687 101320 100680 116500 124500 103070 107090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136080000 27940 4154 26248 52461 42338 42338 1 9606 Homo sapiens 0.03188142626277113 TVLPTVPESPEEEVK Unmodified 1652.8509 0.85088273 2527 B4DLG2;O75152;Q0D2N5;E9PBY7;E9PQ61;A0A1W2PPR9 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 0 0 0 3 0 1 55.348 55.389 3 7.4716E-06 16508 20230619_1882_Aki_TMTPro18x_K_F3 117.48 98.155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27941 2527 26249 52462 42339 42339 1 9606 Homo sapiens 0.05057132584329338 TVLQEIK Unmodified 829.49092 0.49091866 1028 A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0;Q5JRC6;B4E138;Q8IWS0-4;Q8IWS0-2 PHF6 PHD finger protein 6 yes no 0 0 0 6.5 0.5 1 1 50.658 50.737 2 0.0074645 14229 20230619_1886_Aki_TMTPro18x_K_F6 130.27 50.092 89646 66840 72996 80254 81154 96812 92207 87375 118590 76894 79081 76003 83071 64417 79376 88752 97262 72341 82720 61330 75719 80161 84088 96404 93089 89645 117610 78339 83154 76857 84483 68119 81808 87857 92714 68975 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 576210000 27942 1028 26250 52463;52464 42340 42340 1 9606 Homo sapiens 0.06935284011512977 TVLQMDELK Unmodified 1075.5583 0.5583463 3579 P42285;A8K6I4;B4E3M6 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 0 0 5.5 0.5 1 1 55.28 55.35 3 0.081502 15943 20230619_1885_Aki_TMTPro18x_K_F5 39.625 9.0608 53518 46365 49678 47580 55205 70245 63399 55745 88466 41742 45679 40033 45609 40802 36125 52607 51451 51066 49476 42458 50875 48268 57250 68969 64157 57584 86832 43008 48821 40809 46155 42680 37839 52536 49077 48520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79427000 27943 3579 26251 52465;52466 42341 42341 1 9606 Homo sapiens 0.023589461601659423 TVLQYRPVHIDPISR Unmodified 1792.9948 0.99480205 4210 Q8IXT5;B9ZVT1 RBM12B RNA-binding protein 12B yes no 0 0 1 4 0 1 46.951 46.994 4 0.00036036 12614 20230619_1883_Aki_TMTPro18x_K_F4 94.203 77.95 48102 34088 46698 57376 55462 59850 55450 66262 61529 57580 59796 52716 63700 42937 61592 67499 69244 65240 44430 31407 47750 56022 56909 60442 56126 66982 62276 58489 61564 53472 64722 45970 63121 67283 66151 62004 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228910000 27944 4210 26252 52467 42342 42342 1 9606 Homo sapiens 0.13002443925779517 TVLSNVQEELDR Unmodified 1401.71 0.70997257 419 A0A024R6Z0;O43237-2;O43237;J3KRI4 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 2.5 0.5 1 1 54.902 54.938 2 4.4247E-10 16533 20230619_1881_Aki_TMTPro18x_K_F2 191.79 140.44 218650 169060 211510 221100 176570 236990 216320 226780 274620 275120 273760 273360 323090 260660 253150 330870 314120 380280 202050 155240 215030 219200 187680 238080 217710 233650 276510 275440 283000 277250 324820 273200 262460 333850 300420 360430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 340320000 27945 419 26253 52468;52469 42343 42343 1 9606 Homo sapiens 0.025185987215763816 TVLVALDTVSCLEQGNNSR Unmodified 2075.0317 0.031717419 3350 Q59HG1;O95239;O95239-2;Q6PKB2;B4DYE2;Q2VIQ3 KIF4A;KIF4B Kinesin-like protein;Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 0 0 0 6.5 0.5 1 1 63.385 63.426 3 2.1079E-07 19324 20230619_1887_Aki_TMTPro18x_K_F7 110.41 98.646 29253 25658 29947 23295 28599 29361 28029 27785 34537 28985 23703 24535 32240 24130 31361 31461 28593 29224 27067 23472 30297 23837 29788 29220 28501 28517 34397 29110 25218 25099 32571 25310 31752 31373 27389 27778 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201020000 27946 3350 26254 52470;52471 42344 42344 1 9606 Homo sapiens 0.037202828987119574 TVLVNADGEEVAMR Unmodified 1502.7399 0.73989249 1473 Q03252;A0A384NPH0;A0A0A7M1X5 LMNB2 Lamin-B2 yes no 0 0 0 2 0 1 49.595 49.654 2 0.00017904 14292 20230619_1881_Aki_TMTPro18x_K_F2 99.531 74.739 51384 34372 37721 41717 30503 26882 47712 44417 48308 46320 42799 47157 49268 42036 45077 51399 59286 51623 47355 31556 39367 41359 32686 28737 47117 44240 48961 46718 44493 47652 49901 44026 46725 51496 56534 49057 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 328700000 27947 1473 26255 52472 42345 42345 1 9606 Homo sapiens 0.008632143952354454 TVLWNPEDLIPLPIPK Unmodified 1844.0448 0.044771933 3190 M0QY97;Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 0 0 0 2.5 0.5 1 1 66.491 66.512 3 0.040932 21455 20230619_1881_Aki_TMTPro18x_K_F2 45.33 30.644 1597.2 3656.9 4534.9 3922.2 2399.7 2218 3304.1 4051.5 3049.6 2407.2 4217.9 2844.9 2587.6 3332.3 2341 4014.5 2589.9 2933.9 1516 3342.6 4325.9 3922.4 2672.6 2417.1 3278.9 3968.8 3159.6 2533 4191 2895.9 2688 3449.7 2408.6 3958.3 2477.9 2796.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11451000 27948 3190 26256 52473;52474 42346 42346 1 9606 Homo sapiens 0.15651133811070395 TVMDEGPQVFAPLSEESK Unmodified 1962.9245 0.92445838 2242 B2R7C2;O43264;B4E1J7 ZW10 Centromere/kinetochore protein zw10 homolog yes no 0 0 0 4 0 1 61.62 61.623 3 1.0514E-06 18965 20230619_1883_Aki_TMTPro18x_K_F4 110.37 90.626 45403 33127 38856 37352 36110 48882 45349 45230 51581 41428 36273 35516 39065 35427 46010 44737 34075 35725 41904 30381 39979 37542 38066 48450 45374 46343 51567 41918 38079 36338 40121 37021 46000 44314 32730 34021 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64986000 27949 2242 26257 52475 42347 42347 1 9606 Homo sapiens -0.018486870354763596 TVMENFVAFVDK Unmodified 1398.6853 0.68533773 2776 CON__P02769 yes yes 0 0 0 5.33 3.09 1 1 1 64.116 64.141 3 1.8487E-05 19583 20230619_1888_Aki_TMTPro18x_K_F8 125.89 88.299 + 154180 368690 409580 179220 963340 1302300 548920 522500 975730 364910 318910 451570 240590 326430 347090 354680 392020 726450 146230 335370 402120 211430 947840 1213400 589760 582380 942320 381990 355640 449760 254400 342400 353730 376550 376970 684820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1485899999.9999998 27950 2776 26258 52476;52477;52478 42348;42349;42350 42350 3 9606 Homo sapiens 0.0019424731444814824 TVMENFVAFVDK Oxidation (M) 1414.6803 0.68025235 2776 CON__P02769 yes yes 0 1 0 7 0 1 61.347 61.386 3 0.0007909 18385 20230619_1887_Aki_TMTPro18x_K_F7 88.087 67.705 + 51646 63578 65716 48383 122670 149040 103560 102740 134830 62542 77473 93413 68958 62092 77071 75237 74249 101440 48014 58033 66382 51486 122520 142000 106380 106980 133060 66462 81939 92356 71085 65777 78074 76859 71257 95972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112870000 27951 2776 26258 52479 42351 42351 1657 1 9606 Homo sapiens -0.010500565481606827 TVMSHGCENFNTR Oxidation (M) 1567.6508 0.65075991 530 A0A024R8P4;Q9BSJ5-3;Q9BSJ5;I3L072;B7Z7E5;Q9BSJ5-2 C17orf80 Uncharacterized protein C17orf80 yes no 0 1 0 5 0 1 30.908 30.985 3 4.3838E-06 6023 20230619_1885_Aki_TMTPro18x_K_F5 123.28 115.1 5074.8 6593.5 6552.1 5791 7569.2 7885.6 7999.1 6649.1 11665 7020.5 9063.4 7576.6 9391.4 6001.7 9154 8045.7 18516 10259 4721 6023.5 6544.4 5948.5 7791.5 7793.6 8146.8 6890.6 11553 7104 9425.3 7621.2 9564.3 6364.3 9818 8178.1 17568 9751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7827200 27952 530 26259 52480 42352 42352 309 1 9606 Homo sapiens -0.1103594383591826 TVMSHGCENFNTR Unmodified 1551.6558 0.65584529 530 A0A024R8P4;Q9BSJ5-3;Q9BSJ5;I3L072;B7Z7E5;Q9BSJ5-2 C17orf80 Uncharacterized protein C17orf80 yes no 0 0 0 6 0 1 35.051 35.104 3 1.4292E-18 7661 20230619_1886_Aki_TMTPro18x_K_F6 179.67 169.04 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27953 530 26259 52481 42353 42353 1 9606 Homo sapiens -0.0979163997330943 TVNATGSSAAPGSSDKPSDPR Unmodified 2000.9399 0.93992552 3190 M0QY97;Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes no 0 0 1 5 0 1 36.08 36.172 3 4.3023E-09 7977 20230619_1885_Aki_TMTPro18x_K_F5 120.4 102.81 19954 14486 18818 20407 24763 24032 18607 21943 25104 22680 29622 26193 26037 21478 20480 32141 30968 28165 18429 13316 19301 20162 25076 23981 19336 22572 25376 22992 29986 26308 26428 22867 21567 31868 29509 26804 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19838000 27954 3190 26260 52482 42354 42354 1 9606 Homo sapiens -0.02050684194114183 TVNAVVEFFQSNK Unmodified 1481.7514 0.75144346 4140 Q709C8-4;Q709C8-2;Q709C8-3;Q709C8 VPS13C Vacuolar protein sorting-associated protein 13C yes no 0 0 0 3 0 1 63.469 63.5 3 0.021081 19900 20230619_1882_Aki_TMTPro18x_K_F3 57.794 37.13 25114 23295 27296 32072 26913 31139 29070 26131 36867 33698 37500 37661 35284 32898 33627 38737 39747 45166 23258 21388 27571 31638 28060 31438 29426 27268 37128 33788 38347 37893 36029 34397 34592 39176 38008 42811 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29718000 27955 4140 26261 52483 42355 42355 1 9606 Homo sapiens 0.029837794809054685 TVNEDVEEMEIDEQTK Oxidation (M) 1923.8255 0.8255322 2814 D3DS96;Q9NRL2-2;Q9NRL2;Q59G54 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 0 1 0 1 0 1 48.31 48.31 3 5.5525E-06 13709 20230619_1880_Aki_TMTPro18x_K_F1 108.14 98.721 16008 11245 12488 14281 15180 17324 16465 15991 19310 18680 15845 18108 20452 16632 18173 23537 18698 17960 14762 10326 13032 14209 15606 17254 16608 16498 19386 18721 16639 18360 20616 17565 18578 23215 17880 17121 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30813000 27956 2814 26262 52484 42356 42356 1679 1 9606 Homo sapiens -0.09942754791063635 TVNEDVEEMEIDEQTK Unmodified 1907.8306 0.83061757 2814 D3DS96;Q9NRL2-2;Q9NRL2;Q59G54 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 0 0 0 1 0 1 55.224 55.224 3 2.0178E-14 16480 20230619_1880_Aki_TMTPro18x_K_F1 173.26 161.65 39867 34176 44389 49713 35046 51960 48921 47208 46023 51730 46796 47198 59295 47722 49130 57681 53083 54605 36910 31407 44629 48933 37587 52212 48445 48688 47124 51896 48530 48148 59619 49751 50403 57609 50762 51891 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68766000 27957 2814 26262 52485 42357 42357 1 9606 Homo sapiens -0.08698450928432067 TVNQLAHALHQDK Unmodified 1473.7688 0.76882486 1626 A0A6Q8PGS9;A0A6Q8PGA3;A0A6Q8PGV8;A0A6Q8PFJ4;O95140;A0A6Q8PGR2 MFN2 Mitofusin-2 yes no 0 0 0 8 0 1 44.338 44.357 4 1.5896E-15 11226 20230619_1888_Aki_TMTPro18x_K_F8 204.82 178.7 32159 24258 29870 32162 30991 34666 38892 36742 39974 34749 38041 39149 35448 31436 40918 34874 38632 40391 29704 22280 30570 31863 32314 34905 38780 37346 40560 35359 39033 39276 36527 32864 41353 35321 36997 38299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43196000 27958 1626 26263 52486 42358 42358 1 9606 Homo sapiens 0.05089119806530107 TVNQQCQNTVVLWENTK Unmodified 2060.9949 0.99493798 4288 Q8WXH0-2;Q8WXH0;D4YW74;G3V5X4 SYNE2;TROPH Nesprin-2 yes no 0 0 0 8 0 1 54.975 55.042 3 1.1998E-06 15751 20230619_1888_Aki_TMTPro18x_K_F8 114.56 103.14 31453 22877 27088 31641 28497 28606 34205 31794 33912 32145 37826 40513 40645 32495 30646 43860 43312 41098 29030 21024 27929 31188 29620 29232 34145 32290 34710 32716 38758 40491 40915 34382 32110 43698 41303 39073 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25148000 27959 4288 26264 52487 42359 42359 1 9606 Homo sapiens 0.006880310727865435 TVNSFTIPK Unmodified 1005.5495 0.54949617 4638 Q9P031 CCDC59 Thyroid transcription factor 1-associated protein 26 yes yes 0 0 0 2.5 0.5 1 1 52.221 52.273 3 0.0036333 15478 20230619_1881_Aki_TMTPro18x_K_F2 79.974 36.728 26052 19882 27045 28486 27559 34137 31817 30199 35100 30637 27106 27274 31103 25721 28946 27691 31068 28727 24087 18276 27414 28123 28725 33980 31928 31136 35255 30851 28369 27779 31514 26697 29580 27861 29689 27283 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31113000 27960 4638 26265 52488;52489 42360 42360 1 9606 Homo sapiens 0.046943405859906306 TVNSLNVSANENR Unmodified 1416.6957 0.69571949 3867 Q13740-2 ALCAM CD166 antigen yes yes 0 0 0 5.5 0.5 1 1 39.701 39.791 2 2.7401E-10 9432 20230619_1885_Aki_TMTPro18x_K_F5 203.51 142.93 14559 16158 19747 22940 28457 29456 26031 30454 31234 31636 21400 20103 35549 23104 18558 43319 30726 22939 13532 14832 19780 22686 28779 29309 26546 31042 31185 31559 23010 21075 34996 24813 19976 41989 29227 22032 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20189000 27961 3867 26266 52490;52491 42361;42362 42361 2 9606 Homo sapiens 0.004039462932723836 TVNSNCEINNR Unmodified 1319.5888 0.58881158 1588 Q15154;Q15154-5;H0YBA1;D3DSQ0;A0A5H1ZRS1;B9EIS5;A2RUU9;Q15154-2;Q15154-4;A0A4W8VX11;E7EV93 PCM1 Pericentriolar material 1 protein yes no 0 0 0 3.5 0.5 1 1 31.963 32.033 2 6.9878E-06 6332 20230619_1883_Aki_TMTPro18x_K_F4 154.24 123.17 6873.4 2106.1 8377.7 9566.6 9688.1 16092 10042 8481.3 8744.6 8666.2 8941.8 10012 7733.5 9203.3 9628.3 3665.4 10583 10497 6342.3 1996.5 8420.1 9106.5 10003 15570 10063 9199.3 8991.7 8797.6 9125.8 10055 8039.5 9226.5 9775.7 4176 10116 9898.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10791000 27962 1588 26267 52492;52493 42363 42363 1 9606 Homo sapiens -0.05819927192760588 TVNTESEMMQCLK Unmodified 1569.6837 0.68369952 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 0 0 5.5 0.5 1 1 53.73 53.799 3 7.7309E-08 15383 20230619_1885_Aki_TMTPro18x_K_F5 150.69 119.87 77253 62417 78785 89800 84560 76486 72092 71167 69420 81035 104330 91628 90230 99989 79345 108710 95286 107190 71440 57364 80018 88224 86887 78267 73406 73395 72290 81692 104680 92929 92171 103210 81928 108940 91097 101780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 289900000 27963 4170 26268 52494;52495 42364;42365 42364 2 9606 Homo sapiens -0.07835497828068583 TVNVVQFEPSK Unmodified 1246.6558 0.65575216 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4;A0A6Q8PHI7;H7C443;A0A6Q8PFZ6 GARS Glycine--tRNA ligase yes no 0 0 0 7.5 0.5 2 2 53.065 53.137 2;3 2.0538E-12 14872 20230619_1888_Aki_TMTPro18x_K_F8 161.22 125.54 251020 215080 243930 260270 216820 244980 247360 237000 269630 268250 285300 296230 274140 217400 329500 317710 302750 294330 232120 197260 248060 258960 228240 248740 248420 243640 274050 270220 291720 296830 282640 232160 332550 316390 289870 279840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 730160000 27964 3576 26269 52496;52497;52498;52499 42366;42367 42367 2 9606 Homo sapiens 0.042290513606758395 TVPEELVKPEELSK Unmodified 1596.8611 0.86105349 4685 Q9UMS4;F5GY56;H0YGF3 PRPF19 Pre-mRNA-processing factor 19 yes no 0 0 1 5 0.707 1 2 1 53.598 53.657 3;4 8.3186E-07 15640 20230619_1883_Aki_TMTPro18x_K_F4 133.25 103.04 811990 661550 738860 801930 753570 938260 884680 852000 981220 963420 966490 937490 1080100 868920 933830 1100300 995340 1004800 750240 606850 757440 800090 786140 936210 887340 879360 993760 967080 997050 950940 1091400 910950 956480 1096200 951810 955340 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1366200000 27965 4685 26270 52500;52501;52502;52503 42368;42369;42370;42371 42368 4 9606 Homo sapiens 0.08649740309601839 TVPEGDWFCPECRPK Unmodified 1876.8236 0.8236389 2814 D3DS96;Q9NRL2-2;Q9NRL2;Q59G54;B3KND8 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 0 0 1 6 0 1 52.27 52.347 3 1.3628E-07 14974 20230619_1886_Aki_TMTPro18x_K_F6 130.27 106.81 45562 41289 45632 52310 40599 47925 52461 47860 52469 63695 53894 49083 64660 48105 53109 58909 53961 56013 42159 37878 46321 51859 42896 48791 52209 49339 53585 63063 55666 50456 65047 50272 54287 58848 51636 53224 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50040000 27966 2814 26271 52504 42372 42372 1 9606 Homo sapiens -0.07969997499344572 TVPEGQIILAK Unmodified 1167.6863 0.68632401 3620 P50748;E7ES84;B4E0D8 KNTC1 Kinetochore-associated protein 1 yes no 0 0 0 7.5 0.5 1 1 54.016 54.086 3 0.082744 15334 20230619_1887_Aki_TMTPro18x_K_F7 38.402 14.846 35815 25701 29899 29795 39055 38144 34491 31555 41451 37524 34697 37611 34934 22879 27206 32239 33555 34373 33047 23579 30993 29867 39707 37807 35245 32854 41578 37609 35936 37646 35240 24617 28179 32350 32049 32622 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39427000 27967 3620 26272 52505;52506 42373 42373 1 9606 Homo sapiens 0.1091882974571945 TVPFCSTFAAFFTR Unmodified 1650.7864 0.78644876 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8;B4DVU1 HEL107;TKT Transketolase yes no 0 0 0 7 0 1 64.801 64.828 3 2.1656E-12 20014 20230619_1887_Aki_TMTPro18x_K_F7 190.57 169.61 43788 38897 40926 41815 34731 42330 38890 40325 75532 43702 46825 38656 51829 51751 44259 53615 56571 51873 40490 35631 41723 42016 36794 42727 40090 41426 73617 43938 49536 39972 52460 53021 45867 53729 53975 49305 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 246010000 27968 3523 26273 52507 42374 42374 1 9606 Homo sapiens -0.012913009828480426 TVPFLPLLGGCIDDTILSR Unmodified 2086.1133 0.1132622 2463 B4DEH0;Q7Z7H8;Q7Z7H8-2 MRPL10 39S ribosomal protein L10, mitochondrial yes no 0 0 0 2.5 0.5 1 1 66.595 66.616 3 1.7063E-10 21465 20230619_1881_Aki_TMTPro18x_K_F2 135.27 118.92 1920.1 2326.4 3364.6 2539.9 3097.6 1787.7 2520 3106 2653.3 1421.3 1870 3530.1 4104.5 3009.8 3014.4 2898.9 1853.9 3170.7 1791.9 2129.3 3286 2542.3 3206 1900.3 2582.5 3037.4 2663.2 1590.7 2064.9 3467.7 4061.3 3116.5 3020 2931.2 1794.2 3003.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24972000 27969 2463 26274 52508;52509 42375 42375 1 9606 Homo sapiens 0.11365010328654535 TVPIDDSSETLEPVCR Unmodified 1816.8513 0.85129344 4751 Q9Y5T5-5;Q9Y5T5-2;Q9Y5T5;H9KVB6 USP16 Ubiquitin carboxyl-terminal hydrolase 16 yes no 0 0 0 1.5 0.5 1 1 50.848 50.874 3 4.8511E-11 14854 20230619_1881_Aki_TMTPro18x_K_F2 151.38 141.85 36088 37437 40031 38971 41678 48969 47079 46148 50236 49943 43886 40205 44337 39917 43455 47982 62712 48415 33455 34266 40364 39385 43313 48702 47251 47426 50769 49980 45329 41257 45240 41616 45284 48100 59717 46032 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96821000 27970 4751 26275 52510;52511 42376 42376 1 9606 Homo sapiens -0.024458157581193518 TVPLYESPR Unmodified 1060.5553 0.55530983 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5 DDB1 DNA damage-binding protein 1 yes no 0 0 0 6 0.816 1 1 1 44.214 44.298 2 0.0001357 11325 20230619_1886_Aki_TMTPro18x_K_F6 149.82 106.01 323130 260710 298250 318370 337780 364680 366340 349630 400320 383370 426000 431710 434320 380140 393110 424590 457200 439870 298570 239180 305770 317410 348480 364950 368750 359170 406880 387150 436270 434330 441160 396110 404170 426760 436710 417690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 556030000 27971 1710 26276 52512;52513;52514 42377;42378;42379 42378 3 9606 Homo sapiens 0.02745439097657254 TVPPAVTGITFLSGGQSEEEASINLNAINK Unmodified 3056.5666 0.56660939 3378 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;A0A0M4FNU3;H3BR68 ALDOA;HEL-S-87p Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 7.25 0.433 3 1 75.08 75.097 4 0.0072546 22988 20230619_1887_Aki_TMTPro18x_K_F7 55.063 47.071 5836.7 2347.3 7345.2 2352.9 4766.9 6075.6 5734.6 5170.6 4740.2 4731.3 4492.4 1105.6 5211.3 7554.9 5633.5 6043.5 4797.3 6712.5 5381.8 2142.2 7267.4 2258.9 4949.4 5818.4 5491.8 5123.9 4868.1 4516.8 4481.4 1078.3 5288.4 7492.7 5610.4 6029.8 4572.5 6347.7 5 2 6 2 4 5 4 4 5 4 4 1 5 6 5 5 4 5 6814800 27972 3378 26277 52515;52516;52517;52518 42380;42381;42382;42383;42384;42385 42382 6 9606 Homo sapiens 0.12058874608237602 TVPQSQTQPLHK Unmodified 1362.7256 0.72556306 2601 B4DVQ2;H0Y3K4;Q96EV2 RBM33 RNA-binding protein 33 yes no 0 0 0 8 0 1 37.927 37.913 3 0.0055106 8631 20230619_1888_Aki_TMTPro18x_K_F8 70.438 42.471 36172 26461 33237 35264 38010 43262 36661 38176 41481 35311 39325 32816 35015 29423 35568 31225 42773 35278 33403 24307 34091 34985 39090 43011 37201 39267 41880 35778 40220 33331 35905 30572 36527 31593 40803 33492 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13644000 27973 2601 26278 52519 42386 42386 1 9606 Homo sapiens 0.05870930029277588 TVPQSSLTMGQLYEK Oxidation (M) 1696.8342 0.83418681 3071 H3BQ50;P60520 GABARAPL2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes no 0 1 0 7.5 0.5 1 1 50.905 50.982 3 1.4078E-05 14054 20230619_1887_Aki_TMTPro18x_K_F7 106.52 86.784 140000 125780 137660 155550 126480 131980 146530 136760 154790 161050 174460 147090 175240 139850 170360 167930 163110 142250 129510 115360 139960 154330 132720 135410 146880 140120 158030 161030 177940 149820 178500 146000 172900 166900 155990 135460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114380000 27974 3071 26279 52520;52521 42387;42388 42387 1794 2 9606 Homo sapiens 0.013643084267414451 TVPSTPTLVVPHR Unmodified 1402.7932 0.79324869 3440 P12270 TPR Nucleoprotein TPR yes yes 0 0 0 3 0 1 45.146 45.222 3 4.8128E-06 11892 20230619_1882_Aki_TMTPro18x_K_F3 126.83 80.674 71378 63159 65345 70481 74101 83355 80592 84176 91967 84611 88490 81333 95549 77332 81664 82169 98043 89491 65989 57875 67052 70769 76485 83340 81238 85920 92902 85401 91207 82601 96619 80199 84184 82912 93589 84952 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70232000 27975 3440 26280 52522 42389 42389 1 9606 Homo sapiens 0.10796379960061131 TVPVEAVTSK Unmodified 1029.5706 0.57062555 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;B3KRK4;B4E358 CTTN Src substrate cortactin yes no 0 0 0 6.5 0.5 1 1 46.816 46.905 2 4.1657E-11 12560 20230619_1886_Aki_TMTPro18x_K_F6 197.27 141.83 132090 102390 109280 126750 128550 131660 145550 141820 162560 152020 163690 182170 184280 150780 154350 199060 195800 169340 121920 93963 113310 126070 132440 133020 146270 144480 164680 154000 168910 182530 186010 159070 160000 197480 186750 161250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107950000 27976 1413 26281 52523;52524 42390;42391 42390 2 9606 Homo sapiens 0.05702305894828896 TVPVSSNDTPPSALQEAAPLTSSMDPLPVFLYPPVQR Unmodified 3920.987 0.98700564 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67;Q7Z3K3-3;B4DSK8;H0YCT3 POGZ Pogo transposable element with ZNF domain yes no 0 0 0 1 0 1 65.737 65.737 4 0.043839 20822 20230619_1880_Aki_TMTPro18x_K_F1 41.749 39.117 2012.3 0 1444.3 1973.6 1763 1990.7 2878.2 1368.3 1884 2012.9 2144.3 2607 2159.3 2907.9 1966.7 1538.8 2346.3 2052.4 1844.7 0 1523.7 1825 1834.3 1993 2801.7 1463.9 1985.8 2019.6 2192.7 2625.4 2201.5 2912.6 2021.5 1599.9 2239.2 1945 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3270100 27977 4164 26282 52525 42392 42392 1 9606 Homo sapiens 0.14335162030374704 TVQDALESLVAR Unmodified 1300.6987 0.69867961 1642 A0A7G6J4N4;Q14694;Q14694-3;Q14694-2;Q6P2I0;H3BQP1;H3BNS8 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 0 0 0 7 0 1 62.69 62.726 3 3.8117E-07 19060 20230619_1887_Aki_TMTPro18x_K_F7 155.86 127.64 31283 22191 23311 29413 22825 31803 26160 30941 28094 30411 33969 24374 33621 32167 27560 38311 31190 33031 28841 20387 24379 29130 23911 31935 26264 31639 28750 30583 34489 25345 34060 33233 28394 38074 29820 31422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72662000 27978 1642 26283 52526 42393 42393 1 9606 Homo sapiens 0.06035821418049636 TVQGPPTSDDIFER Unmodified 1560.742 0.74200098 1194 A0A140VJQ4;P04181 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes no 0 0 0 3 0.816 1 1 1 50.545 50.596 2 1.7629999999999998E-28 14255 20230619_1883_Aki_TMTPro18x_K_F4 256.31 206.18 131180 110510 129090 116730 104950 126350 135830 137110 153150 159160 192410 207950 186840 185040 188920 219830 237230 277590 121310 101230 130890 117610 111840 127310 135770 139920 156550 161130 195450 208170 191200 193420 194920 223460 226790 262900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 350690000 27979 1194 26284 52527;52528;52529 42394;42395;42396 42396 3 9606 Homo sapiens -0.015940335953018803 TVQGSGHQEHINIHK Unmodified 1683.8441 0.84411507 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;Q76MU0 CTTN;EMS1 Src substrate cortactin yes no 0 0 0 6.5 0.5 1 1 32.512 32.574 5 0.00038405 6354 20230619_1887_Aki_TMTPro18x_K_F7 91.441 71.345 27722 22535 27297 32523 32014 35482 34344 38421 25074 30742 29948 39832 27537 26623 26834 30809 39908 44989 25630 20711 27870 32051 32914 35707 34226 38835 26296 31716 30469 39537 28184 28121 28043 31669 38092 42562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51842000 27980 1413 26285 52530;52531 42397 42397 1 9606 Homo sapiens 0.02954677267007355 TVQIEASTVEIEER Unmodified 1602.8101 0.81008055 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;C9J2Q4;C9J938;C9JB25;C9IY94;H7C310;C9IZU3;C9JQJ4;C9JZI2;B5MD47 SEPT2 Septin-2 yes no 0 0 0 2 0 1 50.813 50.865 2 3.5406999999999997E-28 14830 20230619_1881_Aki_TMTPro18x_K_F2 289.34 253.01 85873 74918 75647 88043 79605 87487 90357 90198 107110 108290 110030 109180 125470 104460 112420 119000 116890 128330 79359 68687 77833 87836 82702 88592 91002 92450 108320 108500 113430 110650 126920 108710 114830 119860 111880 121750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 556600000 27981 3910 26286 52532 42398 42398 1 9606 Homo sapiens 0.0327879126471089 TVQIPVYDFVSHSR Unmodified 1646.8417 0.84165545 1357 A0A2R8Y653;Q9BZX2;B4DGD3 UCK2 Uridine-cytidine kinase 2 yes no 0 0 0 2 0 1 55.943 55.961 3 7.7399E-07 16909 20230619_1881_Aki_TMTPro18x_K_F2 129.92 109.49 38901 35361 34853 42077 39002 45536 41449 37732 43661 45514 42132 44002 47137 37711 41714 48587 45512 50052 35964 32419 35851 41975 40276 45607 41712 39313 44326 45538 43534 44518 47678 39701 42762 48710 43540 47507 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123370000 27982 1357 26287 52533 42399 42399 1 9606 Homo sapiens 0.04410828809295708 TVQQHAGETDPVTTMR Oxidation (M) 1785.8316 0.83156105 2584 H3BPK3;B4DT01;Q16775-2;Q16775;H3BV79 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes no 0 1 0 3 0 1 32.069 32.147 3 0.00015445 6411 20230619_1882_Aki_TMTPro18x_K_F3 89.846 80.663 11763 12085 13410 16009 11261 14358 15555 13343 17327 17739 21364 17891 18227 13902 16492 19315 19916 18026 10907 11087 13473 15817 11992 14616 15489 13832 17702 17696 21565 18035 18609 14764 17005 19243 19009 17142 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48195000 27983 2584 26288 52534 42400 42400 1563 1 9606 Homo sapiens -0.029921469782721033 TVQQHAGETDPVTTMR Unmodified 1769.8366 0.83664643 2584 H3BPK3;B4DT01;Q16775-2;Q16775;H3BV79 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes no 0 0 0 3 0 1 35.993 36.05 3 3.7134E-20 7994 20230619_1882_Aki_TMTPro18x_K_F3 216.34 207.63 20712 17794 21837 22074 24931 29688 24598 28055 30734 19482 29461 28707 26256 23642 27421 22324 30310 30768 19167 16324 22140 22042 25665 29394 25020 28534 30856 20446 30144 28565 26965 24485 27994 22945 28976 29132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33606000 27984 2584 26288 52535 42401 42401 1 9606 Homo sapiens -0.01747843115640535 TVQRARSPPFECR Unmodified 1602.8049 0.80489279 2905 E7EW31 PROB1 Proline-rich basic protein 1 yes yes 0 0 2 1 0 1 50.774 50.774 2 0.010636 14668 20230619_1880_Aki_TMTPro18x_K_F1 59.908 24.639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27985 2905 26289 52536 42402 42402 1 9606 Homo sapiens 0.027602537117445536 TVQTAAANAASTAASSAAQNAFK Unmodified 2151.0556 0.055623984 2015 A8K2G0;O15126;B4DP10;B4E2V7;A0A087WXB0;Q96AZ4;A0A087WU14 SCAMP1 Secretory carrier-associated membrane protein 1 yes no 0 0 0 3 0 1 57.288 57.32 3 1.6046E-44 17327 20230619_1882_Aki_TMTPro18x_K_F3 238.49 219.9 41441 37697 46748 43357 40164 48638 42339 46138 45690 52393 55912 52680 59884 51244 53628 66544 60429 70058 38387 34549 46927 43411 42318 48723 42715 47461 46799 52614 57036 53462 60698 53726 55094 66776 57819 66469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121060000 27986 2015 26290 52537 42403 42403 1 9606 Homo sapiens 0.026138396568057942 TVQYQNELHK Unmodified 1258.6306 0.63060004 4681 Q9UL26 RAB22A Ras-related protein Rab-22A yes yes 0 0 0 7 0 1 40.93 40.997 3 2.7574E-07 9655 20230619_1887_Aki_TMTPro18x_K_F7 147.28 113.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27987 4681 26291 52538 42404 42404 1 9606 Homo sapiens 0.011629965580596036 TVSDLIDQK Unmodified 1017.5342 0.53424004 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;H7C3A0;C9JHP4;C9K0Q7;B4DEH4 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 0 4.8 0.748 2 2 1 52.759 52.813 2;3 2.5503E-05 15280 20230619_1883_Aki_TMTPro18x_K_F4 132.76 91.729 218950 148310 190950 204130 206040 236250 230690 240940 294640 288580 298460 318790 339330 271360 239230 390150 368600 343840 202030 136340 196630 201960 213720 236490 233160 247030 296740 290020 307820 320770 340300 287740 253000 387090 351260 327160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 985390000 27988 2176 26292 52539;52540;52541;52542;52543 42405;42406 42405 2 9606 Homo sapiens 0.02617428998144078 TVSLGAGAK Unmodified 802.45487 0.45486751 1089 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;A0A7I2V4G8;A0A7I2V3G5;A0A7I2V579;E5RGW4 NPM1 Nucleophosmin yes no 0 0 0 3.43 2.66 2 2 1 1 1 42.879 42.92 2;3 0.00023503 10656 20230619_1888_Aki_TMTPro18x_K_F8 164.72 74.821 745230 346800 805450 883670 1003000 1385400 848100 1062800 1290000 861760 1274700 1971200 1074300 1374400 546270 857420 1857400 2184800 687700 322490 816910 853360 1025000 1353400 878320 1102400 1286500 916120 1303300 1927100 1082300 1409200 638830 943180 1766700 2059900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1802399999.9999998 27989 1089 26293 52544;52545;52546;52547;52548;52549;52550 42407;42408;42409;42410 42410 4 9606 Homo sapiens 0.04573826834655392 TVSLGAGAKDELHIVEAEAMNYEGSPIK Oxidation (M) 2944.4488 0.44880244 1089 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;A0A7I2V4G8;A0A7I2V3G5;A0A7I2V579 NPM1 Nucleophosmin yes no 0 1 1 6 0 1 61.659 61.713 4 2.0616E-38 18876 20230619_1886_Aki_TMTPro18x_K_F6 207.72 193.24 226860 206280 212630 260250 230770 231840 242540 229270 204080 276800 298500 279910 258340 233100 268560 268180 219580 248420 209810 189230 217710 257950 238290 236630 242780 235810 214110 277090 300010 282430 265370 243750 270230 267880 210760 236050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2054599999.9999998 27990 1089 26294 52551 42411 42411 652 1 9606 Homo sapiens 0.05435598747953918 TVSLGAGAKDELHIVEAEAMNYEGSPIK Unmodified 2928.4539 0.45388781 1089 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;A0A7I2V4G8;A0A7I2V3G5;A0A7I2V579 NPM1 Nucleophosmin yes no 0 0 1 6.6 1.02 1 1 2 1 82.818 82.85 4;5 1.596E-13 25530 20230619_1886_Aki_TMTPro18x_K_F6 126.16 107.44 18919 17053 19743 20903 14853 18938 18787 17906 16182 21943 21471 20509 21792 18768 21432 20425 16537 18228 17512 15639 19922 20769 15928 19273 18650 18482 16868 21904 21794 20822 22203 19501 21525 20384 15882 17330 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 15215000 27991 1089 26294 52552;52553;52554;52555;52556 42412;42413;42414 42413 3 9606 Homo sapiens 0.06679902610585486 TVSLLDENNVSSYLSK Unmodified 1767.8891 0.88905915 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7.5 0.5 1 1 61.927 61.961 3 1.9626E-11 18594 20230619_1888_Aki_TMTPro18x_K_F8 162.46 142.03 381500 325170 381010 414610 356670 417300 402760 418310 444780 498400 489890 485930 509410 422390 474100 551180 496210 568180 352850 298390 386940 411390 373830 421740 404930 429400 452870 498880 501360 491800 517510 444740 484410 552510 475060 539220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 798400000 27992 3758 26295 52557;52558 42415 42415 1 9606 Homo sapiens 0.03583018498989077 TVSLPPPDLGTGTDGPAGSDTSPFR Unmodified 2441.171 0.17104767 407 A0A024R6Q2;Q96FX7;Q96B39;H0Y2Q1 C14orf172;TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A yes no 0 0 0 5 0 1 59.642 59.695 3 7.4597E-20 17671 20230619_1885_Aki_TMTPro18x_K_F5 156.23 141.27 30315 26253 31550 28041 27998 36863 30380 28814 43259 25147 24784 22745 26385 19207 28623 27756 25791 26016 28051 24049 31878 28301 29495 36415 30885 29897 42549 25585 26360 23099 26969 20397 28906 27660 24706 24728 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9137600 27993 407 26296 52559 42416;42417 42416 2 9606 Homo sapiens 0.00810898997087861 TVSPDRLELEAAQK Unmodified 1555.8206 0.82058566 3904 Q14974;B2RBR9;J3QR48 KPNB1 Importin subunit beta-1 yes no 0 0 1 5 0.816 1 1 1 47.558 47.624 3 1.2284E-06 12720 20230619_1885_Aki_TMTPro18x_K_F5 127.18 94.9 925190 782360 980910 948370 925420 1250800 1005300 1029900 1186700 1194700 1181300 1226800 1232800 1015700 1117000 1222300 1257900 1297300 856110 717580 991030 948110 969660 1236200 1015000 1071600 1198900 1199600 1214800 1236500 1250900 1065900 1146200 1228900 1202400 1231200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2241700000 27994 3904 26297 52560;52561;52562 42418;42419 42418 2 9606 Homo sapiens 0.06490818709789892 TVSQIISLQTLKK Unmodified 1457.8817 0.88172935 3325 O76021;J3QSV6;A0PJ61;Q32Q62;A0PJ87;I3L3U9;I3L3C4;I3L234 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 0 0 1 6 0 1 57.849 57.918 4 9.4963E-05 17212 20230619_1886_Aki_TMTPro18x_K_F6 107.99 90.969 215610 216110 247960 217760 235040 216960 243530 253520 200390 239310 213540 180880 229770 174050 224170 226510 202340 182520 199890 197780 248750 220040 244800 220540 243910 256010 207420 240660 219050 186180 233530 182630 226850 224340 193670 173890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131100000 27995 3325 26298 52563 42420 42420 1 9606 Homo sapiens 0.17110375479887807 TVSSGELATVVR Unmodified 1217.6616 0.66156582 4480 Q9C0C4;C9J4M7;C9JV89 SEMA4C Semaphorin-4C yes no 0 0 0 6 0 1 46.609 46.692 2 4.7792E-05 12432 20230619_1886_Aki_TMTPro18x_K_F6 131.42 97.34 64168 48470 58291 65195 57367 63650 60985 59759 65536 69482 76561 76514 73679 62952 74315 77098 81374 79374 59261 44524 59725 64429 59775 64386 61448 61604 66961 69902 77919 76903 75322 66130 75961 77372 77776 75373 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27249000 27996 4480 26299 52564 42421 42421 1 9606 Homo sapiens 0.06144149872329763 TVSYLGLE Unmodified 880.4542 0.45419881 3208 O00244;E5RIM7;A0A2Z4T009;E5RGN3 ATOX1 Copper transport protein ATOX1 yes no 0 0 0 4 0.816 1 1 1 60.538 60.566 2 0.0010044 18530 20230619_1883_Aki_TMTPro18x_K_F4 151.17 130.89 132300 112360 116030 136010 126160 150770 142090 139880 161530 136730 140200 131000 139600 115440 144520 160860 143800 140140 122240 103060 119510 135590 130810 151060 142920 143580 162540 138230 144790 132830 142710 121980 146930 159710 137570 133340 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 214160000 27997 3208 26300 52565;52566;52567 42422;42423;42424;42425 42423 4 9606 Homo sapiens 0.009189873949367211 TVSYTNLK Unmodified 924.49165 0.49164694 553 Q6MZT2;A0A024R906;Q16832 DKFZp686D1354;DDR2 Discoidin domain-containing receptor 2 yes no 0 0 0 1.5 0.5 1 1 46.266 46.306 2 0.0028615 12728 20230619_1881_Aki_TMTPro18x_K_F2 121.09 84.536 78018 61538 69841 72693 80591 82741 78077 76446 98096 59524 56108 59061 61711 46665 76817 57068 66396 57890 72062 56444 71793 72638 82795 82783 79460 78091 97036 61123 59852 59554 63496 49126 77156 57295 63569 55007 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40114000 27998 553 26301 52568;52569 42426 42426 1 9606 Homo sapiens 0.02638078660561405 TVTAEVQPQCGR Unmodified 1344.6456 0.64559818 2554 B4DNM8;Q32P28-4;Q32P28;Q32P28-3;Q68CW0 LEPRE1;DKFZp547C166 Prolyl 3-hydroxylase 1 yes no 0 0 0 4.5 0.5 1 1 37.009 37.052 2 5.4102E-05 8333 20230619_1885_Aki_TMTPro18x_K_F5 150.61 132.17 18415 17321 20391 17253 27214 29328 26127 25969 34684 26792 29756 32066 27609 24573 28706 28950 34746 35448 17059 15853 20636 17603 27700 28671 26660 26769 34628 27210 30686 32051 28316 25829 29505 29384 33191 33597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26503000 27999 2554 26302 52570;52571 42427;42428 42428 2 9606 Homo sapiens -0.012938796362277571 TVTAMDVVYALK Oxidation (M) 1325.6901 0.69008876 2211 B2R4R0;P62805;Q0VAS5 HIST1H4H;HIST1H4A Histone H4 yes no 0 1 0 3.89 2.77 2 2 2 1 2 62.023 62.045 3 5.1287E-06 19026 20230619_1881_Aki_TMTPro18x_K_F2 138.99 104.46 1058700 898680 914660 1048500 940100 1080600 1036500 1088200 1044700 1052300 1196900 1212200 1203500 1135100 1238300 1263300 1192000 1436700 978080 823950 942350 1047100 977590 1090500 1040200 1110300 1069900 1070200 1221600 1221100 1230300 1179900 1256300 1277100 1142700 1361900 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 18862000000 28000 2211 26303 52572;52573;52574;52575;52576;52577;52578;52579;52580 42429;42430;42431;42432;42433;42434;42435 42431 1378 7 9606 Homo sapiens 0.04027131457246469 TVTAMDVVYALK Unmodified 1309.6952 0.69517413 2211 B2R4R0;P62805;Q0VAS5 HIST1H4H;HIST1H4A Histone H4 yes no 0 0 0 2.19 0.634 1 12 2 1 67.982 67.996 2;3 3.5108E-18 19848 20230619_1882_Aki_TMTPro18x_K_F3 278.03 201.97 19452000 17489000 17405000 17440000 13272000 19416000 18079000 20348000 21787000 20532000 20390000 22210000 21155000 22658000 18190000 30838000 19848000 27337000 17982000 16010000 17794000 17657000 14289000 19501000 18075000 20720000 21926000 20795000 21030000 22504000 21352000 23762000 18716000 30622000 19001000 25975000 12 13 11 11 12 12 12 13 13 13 13 13 12 13 12 13 12 13 136150000000 28001 2211 26303 52581;52582;52583;52584;52585;52586;52587;52588;52589;52590;52591;52592;52593;52594;52595;52596 42436;42437;42438;42439;42440;42441;42442;42443;42444;42445;42446;42447;42448;42449;42450;42451;42452;42453 42452 18 9606 Homo sapiens 0.05271435319878037 TVTAMDVVYALKR Unmodified 1465.7963 0.79628516 2211 B2R4R0;P62805;Q0VAS5 HIST1H4H;HIST1H4A Histone H4 yes no 0 0 1 5.5 0.5 1 1 61.473 61.524 3 2.1704999999999997E-21 18555 20230619_1885_Aki_TMTPro18x_K_F5 228.78 204.8 7552700 13626000 11113000 6499700 9952500 5227800 8742900 8185200 3171600 5170900 5034600 1100200 1512300 743110 8976300 819660 828540 177610 7063600 12399000 10938000 7172800 10327000 5492100 8726600 8076800 3630500 5250900 4914500 1299000 1995600 788160 8501800 813250 866990 177890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11306000000 28002 2211 26304 52597;52598 42454 42454 1 9606 Homo sapiens 0.08201887022573828 TVTATFGYPFR Unmodified 1258.6346 0.63462279 1152 A0A994J5W6;A0A0U1RQT9;C9JYN0;A0A994J5J4;A8K865;A4D0R1;A0A994J846;Q16563-2;Q16563 SYPL1;SYPL Synaptophysin-like protein 1 yes no 0 0 0 4.5 0.5 1 1 57.397 57.428 2 3.2249E-17 16821 20230619_1885_Aki_TMTPro18x_K_F5 238.54 199.73 196870 166290 182410 167790 227720 263250 242270 266600 294900 211320 205490 195060 223300 192190 233340 239430 216970 192800 181960 152270 187140 170740 233530 259020 245000 270410 293680 216190 215810 198830 227850 200770 236220 237260 207590 183710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 149150000 28003 1152 26305 52599;52600 42455;42456 42456 2 9606 Homo sapiens 0.015650860518007903 TVTCAEILK Unmodified 1033.5478 0.54778161 4443 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 yes yes 0 0 0 6 0 1 49.506 49.583 2 0.025093 13732 20230619_1886_Aki_TMTPro18x_K_F6 79.906 22.803 37751 24428 34588 35471 36646 34292 37499 37760 45855 41729 41346 43774 42719 36779 37559 47892 48190 46148 34837 22475 35425 34898 37895 34852 38023 38446 46062 42025 42705 44109 43329 38751 38927 47820 45991 43858 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12285000 28004 4443 26306 52601 42457 42457 1 9606 Homo sapiens 0.03234963505747146 TVTEIDEK Unmodified 933.46549 0.46549177 180 V9HWJ8;A0A024R203;P61289;P61289-3;P61289-2;K9J957;Q6FHK7;B3KQ25;K7ESG5;J7FRP4 HEL-S-283;PSME3 Proteasome activator complex subunit 3 yes no 0 0 0 2.5 0.5 1 1 43.423 43.498 2 0.00063317 11414 20230619_1881_Aki_TMTPro18x_K_F2 176.09 79.72 143050 74540 173900 174200 227400 254760 182200 239880 225040 172440 211000 238620 229270 210670 187390 105200 252050 221050 132210 69149 174890 168600 230780 250900 187830 244070 226160 179960 218090 238010 231570 212730 194350 114220 240320 208840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 193020000 28005 180 26307 52602;52603 42458 42458 1 9606 Homo sapiens -0.003902353015632798 TVTGEFIDK Unmodified 1008.5128 0.51277632 3290 O75054;O75054-2 IGSF3 Immunoglobulin superfamily member 3 yes no 0 0 0 4.5 0.5 1 1 48.941 48.998 3 0.072066 13316 20230619_1885_Aki_TMTPro18x_K_F5 37.722 9.5131 64090 51341 63440 67470 51465 63061 66818 67790 35089 73362 68971 72556 105710 76638 62003 105140 94151 93571 59249 47138 64351 66757 54778 64190 65574 69086 39088 73728 70780 73896 104570 80477 65827 104420 89768 88999 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 389070000 28006 3290 26308 52604;52605 42459 42459 1 9606 Homo sapiens 0.008860439694217348 TVTIVVR Unmodified 786.49634 0.49633839 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 5.5 1.71 1 1 1 1 1 1 43.176 43.238 2 0.0046451 10859 20230619_1885_Aki_TMTPro18x_K_F5 146.87 60.032 493840 413110 454900 483650 478870 519640 506930 495020 593870 578490 606870 591090 628200 498470 521820 611810 644340 640400 456400 378790 465860 483190 496390 522290 512250 509710 600660 580580 622740 596410 635260 523470 539750 614330 615280 607970 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 975220000 28007 3622 26309 52606;52607;52608;52609;52610;52611 42460;42461;42462 42460 3 9606 Homo sapiens 0.0945500759398783 TVTLGIWDTAGSER Unmodified 1504.7522 0.75217174 2993 F8W8H5;Q969Q5;Q9HAG2;Q8WY67 RAB24 Ras-related protein Rab-24 yes no 0 0 0 6 0 1 58.246 58.315 3 0.0083657 17415 20230619_1886_Aki_TMTPro18x_K_F6 45.188 0 66287 51018 64110 55400 46265 56703 54034 53294 61302 81310 72804 70847 79823 66118 67059 86902 74292 81510 61254 46763 64980 55652 49736 57178 54311 55427 62606 80327 74439 72237 80623 69472 68928 86632 71062 77449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82676000 28008 2993 26310 52612 42463 42463 1 9606 Homo sapiens 0.019985741299478832 TVTLPENEDELESTNRR Unmodified 2001.9603 0.96032661 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 1 1.5 0.5 1 1 44.064 44.105 3 0.00010452 11764 20230619_1881_Aki_TMTPro18x_K_F2 91.657 72.103 40026 34552 37500 40032 45312 48124 39155 43412 48808 45057 52749 54145 58949 39423 53834 58619 51194 48390 37005 31675 38429 40088 46291 47953 40157 44709 49334 45723 54215 54080 59641 42188 54712 58014 48988 46079 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195500000 28009 2484 26311 52613;52614 42464 42464 1 9606 Homo sapiens -0.0005751353430696327 TVTNAVVTVPAYFNDSQR Unmodified 1980.9905 0.99050453 3430;2926 P11142;V9HW22;Q53GZ6;Q96IS6;B3KTV0;P11142-2;Q53HF2;E9PN89;B4DTX2;E9PLF4;E9PQK7;E9PQQ4;E9PI65;E9PK54 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein no no 0 0 0 3.67 3.09 1 1 1 57.832 57.854 3 1.7883E-30 17687 20230619_1881_Aki_TMTPro18x_K_F2 231.06 217.32 71772 61447 72391 79666 72730 80808 81383 80006 86143 91111 87031 84301 100930 79158 83500 95932 97260 108340 66389 56396 73538 78964 75743 81605 81717 82095 87585 91270 89836 85729 101700 82779 86044 96784 93001 102730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 11465000000 28010 3430;2926 26312 52615;52616;52617 42465;42466;42467 42466 3 9606 Homo sapiens 0.0392488992156359 TVTPALSSNVLPR Unmodified 1353.7616 0.76161421 4483 Q9C0E8-2;Q9C0E8;Q9C0E8-4;B7Z829;B7ZLA9;Q9C0E8-3;B7Z7F5 LNP;KIAA1715 Protein lunapark yes no 0 0 0 2.5 0.5 1 1 50.843 50.895 2;3 0.0070665 14482 20230619_1882_Aki_TMTPro18x_K_F3 69.716 45.494 31969 24403 30431 35592 32081 40350 37056 34782 40432 33403 42187 40050 40903 29237 40903 42095 42049 45377 29536 22436 31106 35063 33368 40287 37175 35897 41030 34044 43136 40019 41747 31222 41664 42271 40245 43052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51144000 28011 4483 26313 52618;52619 42468;42469 42469 2 9606 Homo sapiens 0.0988838720613785 TVTPASSAK Unmodified 860.46035 0.46034682 1284 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q8NAN9 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 0 0 0 7.5 0.5 1 1 36.013 36.08 2 9.3544E-07 7925 20230619_1888_Aki_TMTPro18x_K_F8 162.97 62.228 43124 17158 59758 54717 72125 71903 54728 76098 51290 29216 52209 60358 35713 40630 77016 14521 56828 46944 39875 16055 59456 52341 73349 71421 56177 76140 52387 32971 52944 59142 38983 41157 76118 17040 54499 44281 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31548000 28012 1284 26314 52620;52621 42470;42471 42471 2 9606 Homo sapiens 0.024535056264767263 TVTVEFK Unmodified 822.44872 0.4487195 49 G5EA31;A0A024QZM6;P53992;B4DSN3;B7ZAY6;P53992-2 SEC24C Protein transport protein Sec24C yes no 0 0 0 7 0.816 1 1 1 49.83 49.908 2 0.0046027 13508 20230619_1887_Aki_TMTPro18x_K_F7 157.9 50.678 439350 337520 365640 446170 475670 506310 485240 497360 587560 499230 533520 571160 612290 477050 510300 648940 617230 589750 405530 309960 379710 442290 485800 507190 491750 508740 590490 506760 553560 573570 617400 504320 527360 645640 589330 560870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 209700000 28013 49 26315 52622;52623;52624 42472;42473 42472 2 9606 Homo sapiens 0.03039308603149493 TVVAGSSDAAQK Unmodified 1132.5724 0.57241646 3364 V9HW53;O95865;H0Y7N1;A0A140T971;Q5SSV3;Q5SRR8 HEL-S-277;DDAH2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes no 0 0 0 5 0 2 38.258 38.35 2;3 5.3837E-10 8857 20230619_1885_Aki_TMTPro18x_K_F5 153.95 117.36 22733 12628 27449 23822 36601 39997 34628 35850 35718 26147 37107 42857 33640 33462 38994 21461 48919 42480 21014 11668 27612 23336 37218 39095 35066 36637 36337 27464 37910 42392 34742 34191 40001 22997 46665 40148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28340000 28014 3364 26316 52625;52626 42474;42475 42474 2 9606 Homo sapiens 0.01143314912792448 TVVAPSAVAGK Unmodified 998.57605 0.57604528 4172 Q7Z4X2;Q9NX14;Q9NX14-2;A0A8I5KTD1;A0A8J8YU24;A0A8I5KQF7;A0A8I5KTJ9 NDUFB11 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial yes no 0 0 0 1 0 1 45.229 45.229 3 0.00014949 12380 20230619_1880_Aki_TMTPro18x_K_F1 115.57 45.474 66854 47285 60756 71678 79562 87999 87344 86698 101790 73095 90863 103840 86606 79350 86132 86960 112170 99314 61719 43508 62590 70554 81388 87674 88024 88303 102320 75573 93652 103170 88581 83026 89025 87963 106980 94245 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157990000 28015 4172 26317 52627 42476 42476 1 9606 Homo sapiens 0.07670029477321805 TVVENIR Unmodified 829.46577 0.46576654 3671 P57740;P57740-2;B3KMK0 NUP107 Nuclear pore complex protein Nup107 yes no 0 0 0 4.5 0.5 1 1 38.223 38.291 2 0.018192 8881 20230619_1883_Aki_TMTPro18x_K_F4 107.59 21.081 136320 89564 136220 138830 182600 202960 163030 171480 196860 162400 194590 214090 179790 173040 162480 158770 237080 204330 125890 82460 139110 136910 185530 199560 166580 177060 198430 166260 199220 213490 183360 179030 169590 162370 225890 193710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184100000 28016 3671 26318 52628;52629 42477;42478 42477 2 9606 Homo sapiens 0.04421229208935529 TVVGVPSGK Unmodified 842.48617 0.48616764 2270 B2R9B8;H0YAP0;Q96GY0;A0A994J504;A0A994J7X1 ZC2HC1A Zinc finger C2HC domain-containing protein 1A yes no 0 0 0 1 0 1 44.285 44.285 2 0.0016614 12000 20230619_1880_Aki_TMTPro18x_K_F1 113.71 69.312 75060 50301 71635 64075 68495 79889 70644 76951 103240 68734 91105 83858 82588 72738 74812 65638 99481 89274 69301 46203 72959 63807 71559 79495 72138 78572 102690 70438 93599 84085 84236 75041 77512 67436 94874 84580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35673000 28017 2270 26319 52630 42479 42479 1 9606 Homo sapiens 0.05862399868760804 TVVSGLVNHVPLEQMQNR Oxidation (M) 2036.0473 0.047307904 1746 A0A8C8MUD1;Q12904;Q12904-2;B4DNK3;A0A8C8KIA0;A0A804HJ47;A0A5F9ZHC5 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 1 0 1 0 1 50.017 50.017 3 1.6743E-06 14377 20230619_1880_Aki_TMTPro18x_K_F1 98.572 80.978 30604 30766 34667 31827 32142 31885 34024 35300 32785 45033 42435 44236 36189 34567 42757 43167 39749 44973 28370 28161 34816 32088 33586 32346 34189 36080 33910 44927 42841 44594 37463 36418 43203 43342 38097 42677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93864000 28018 1746 26320 52631 42480 42480 1141 1 9606 Homo sapiens 0.07072614206435901 TVVSGLVNHVPLEQMQNR Unmodified 2020.0524 0.052393282 1746 A0A8C8MUD1;Q12904;Q12904-2;B4DNK3;A0A8C8KIA0;A0A804HJ47;A0A5F9ZHC5 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 0 0 2 0 1 53.651 53.679 3 0.00021256 16096 20230619_1881_Aki_TMTPro18x_K_F2 77.899 64.236 15818 20637 16911 20636 16552 23028 17184 21794 22943 22703 21541 23213 26783 23358 25083 23266 24165 27395 14690 18872 17109 20877 17283 23074 17483 22361 23004 22914 22410 23539 27089 24091 25475 23621 23152 25964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219480000 28019 1746 26320 52632 42481 42481 1 9606 Homo sapiens 0.0831691806906747 TVVSGLVQFVPK Unmodified 1272.7442 0.74417324 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 0 4 0 1 62.315 62.32 3 4.9185E-05 19304 20230619_1883_Aki_TMTPro18x_K_F4 121.68 92.936 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28020 1102 26321 52633 42482 42482 1 9606 Homo sapiens 0.11871091671127942 TVVSGSCAAHSLLITTEGK Unmodified 1929.983 0.98297631 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 1 0 1 51.386 51.386 3 9.207500000000001E-25 14916 20230619_1880_Aki_TMTPro18x_K_F1 204.81 187.11 102700 94769 134440 121560 101640 120550 104200 102050 69963 118410 102970 127070 116630 82136 85735 107970 119070 163080 95283 86946 133340 120570 108120 121540 104020 106030 74798 118900 104850 126930 117030 87751 89699 111070 113900 154150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118710000 28021 617 26322 52634 42483 42483 1 9606 Homo sapiens 0.05518414329594634 TVVSHSLTTLGLEVAK Unmodified 1653.9301 0.93013611 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 2 0 1 56.604 56.623 3 1.0634000000000002E-25 17244 20230619_1881_Aki_TMTPro18x_K_F2 224.33 180.95 106780 89378 99972 109030 93901 110490 111340 104270 115660 117990 109470 97477 119700 86460 108760 112130 112620 116220 98699 81986 102100 108510 98539 111470 111390 107350 117390 117890 112980 99543 121210 91015 111020 112480 107750 110330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39447000 28022 3578 26323 52635 42484 42484 1 9606 Homo sapiens 0.12932824329118375 TVVTGIEMFHK Oxidation (M) 1276.6486 0.64855829 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 1 0 1 0 1 49.872 49.872 3 1.1297E-05 14317 20230619_1880_Aki_TMTPro18x_K_F1 142.08 125.84 117470 106710 111690 120360 124710 120800 136700 131960 149160 101740 122400 120730 127230 98674 116480 142640 119530 136970 108650 97784 114180 120480 128700 122440 137490 133270 150010 105070 127050 121090 129140 104860 118960 142220 114450 130090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39195000 28023 1417 26324 52636 42485 42485 885 1 9606 Homo sapiens 0.021299954885762418 TVVTGIEMFHK Unmodified 1260.6536 0.65364367 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 1.5 0.5 1 1 54.195 54.207 3 4.968E-17 16245 20230619_1881_Aki_TMTPro18x_K_F2 188.96 145.28 383540 314510 390220 397280 364880 409590 469490 464970 510770 478980 461410 466090 548980 447290 484230 548810 526650 542330 354700 288620 395580 394690 383800 414480 468570 471520 516080 482950 479640 473250 554360 467510 496230 549330 503590 515120 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 773300000 28024 1417 26324 52637;52638 42486;42487;42488 42488 3 9606 Homo sapiens 0.03374299351185073 TVVVEAGKK Unmodified 929.55458 0.55458155 2499 B4DJ39;O94842-3;O94842-2;O94842 TOX4 TOX high mobility group box family member 4 yes no 0 0 1 8 0 1 40.867 40.859 3 0.00075384 9830 20230619_1888_Aki_TMTPro18x_K_F8 98.048 59.745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28025 2499 26325 52639 42489 42489 1 9606 Homo sapiens 0.08698644448611503 TVWDWELMNDIK Oxidation (M) 1564.7232 0.7231798 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;A0A7P0TBC2 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 1 0 6 0 1 62.735 62.786 3 9.8884E-05 19377 20230619_1886_Aki_TMTPro18x_K_F6 107.34 94.364 182660 170610 177970 193180 175510 204900 205860 209460 242520 141050 142930 160380 154990 147830 158930 180160 164310 188890 169020 156330 181260 193450 183440 206410 206890 211870 240690 146980 152040 161590 158170 154540 161970 180950 157330 179220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163490000 28026 3452 26326 52640 42490 42490 2101 1 9606 Homo sapiens -0.03659286490710656 TVYCNVHK Unmodified 1019.4859 0.48585006 2263 B2R8R5;Q13263;Q13263-2;M0R3C0;M0R2I3 TRIM28 Transcription intermediary factor 1-beta yes no 0 0 0 4.5 3.5 1 1 36.823 36.816 3 0.001706 8695 20230619_1880_Aki_TMTPro18x_K_F1 111.74 68.87 269010 140310 252960 255250 321550 275010 314670 337270 363640 131210 169210 143380 146450 123200 183400 81489 189580 131460 248060 129620 259270 248520 327820 277970 319080 334680 359120 144320 181700 144460 152040 125630 185580 85716 180930 124540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 207010000 28027 2263 26327 52641;52642 42491;42492 42491 2 9606 Homo sapiens -0.02311343122744347 TVYFAEK Unmodified 856.43307 0.43306943 3639 Q53FN1;P52943;H0YHD8 CRIP2 Cysteine-rich protein 2 yes no 0 0 0 6.5 0.5 1 1 49.045 49.126 2 0.015793 13168 20230619_1887_Aki_TMTPro18x_K_F7 110.81 43.773 851440 685260 734690 661430 929720 958470 1100900 1049800 1318900 999900 1073300 999870 1016600 814510 1271600 1142100 1245600 921680 786330 627380 758700 674700 954790 949220 1106000 1064400 1320300 1013600 1110400 1009500 1051400 863480 1286200 1130600 1189800 878940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 498330000 28028 3639 26328 52643;52644 42493 42493 1 9606 Homo sapiens -0.0008897791390154453 TVYGGGCSEMLMAHAVTQLANR Oxidation (M) 2381.0926 0.092619891 3756 V9HW96;P78371;F5GWF6;P78371-2;B7Z4R3;Q9H369 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 1 0 2 0.816 1 1 1 54.184 54.202 3 8.2964E-40 16941 20230619_1881_Aki_TMTPro18x_K_F2 242.8 225.45 135860 111850 123330 147020 122230 128930 131870 131620 132080 147350 156720 145090 151200 126510 141040 171510 142060 161740 125530 102680 126430 145310 127270 131830 132470 134760 135590 147960 159330 146870 153970 133500 143840 170990 136050 153650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 362510000 28029 3756 26329 52645;52646;52647 42494;42495;42496 42495 2428;2429 3 9606 Homo sapiens -0.0426827138498993 TVYGGGCSEMLMAHAVTQLANR Unmodified 2365.0977 0.097705269 3756 V9HW96;P78371;F5GWF6;P78371-2;B7Z4R3;Q9H369 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 2 0 1 58.307 58.321 3 2.9312E-95 17909 20230619_1881_Aki_TMTPro18x_K_F2 352.05 329.62 37158 31609 42042 42202 29103 39722 38710 40051 42654 43263 41276 40182 46707 36664 43046 50257 44561 44895 34405 29020 42115 41718 31558 40339 38624 40985 43189 43453 42649 40833 47303 38665 43960 49963 42623 42697 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 28791000 28030 3756 26329 52648 42497;42498 42497 2 9606 Homo sapiens -0.030239675223583617 TVYHAEEVQCDGR Unmodified 1562.6784 0.67835487 659 A0A024RBB5;F8VW96;Q16527;F8VQR7 CSRP2 Cysteine and glycine-rich protein 2 yes no 0 0 0 2 0 1 33.821 33.877 3 5.7206E-16 7237 20230619_1881_Aki_TMTPro18x_K_F2 211.22 204.27 17404 12259 18165 19457 19854 25428 17566 17506 20567 18454 22811 17766 20838 18674 16610 23005 24416 17093 16085 11287 18424 19117 20458 25059 17947 18458 20863 18595 23170 18130 21143 19449 17428 22702 23235 16325 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99282000 28031 659 26330 52649 42499 42499 1 9606 Homo sapiens -0.08047717304043545 TVYLQSALSSSTSAEK Unmodified 1670.8363 0.8362953 246 A0A024R3I8;O14681-3;O14681;B7ZB74;B4DWJ0 EI24 Etoposide-induced protein 2.4 homolog yes no 0 0 0 1 0 1 54.583 54.583 3 2.7667E-06 16258 20230619_1880_Aki_TMTPro18x_K_F1 116.35 102.12 31129 30657 32648 33581 39142 42094 43325 41599 46102 34611 25913 26838 34684 26973 33293 37878 35010 36228 28832 28077 33148 33799 40236 41917 43502 42336 46002 35139 27941 27617 35052 28416 33999 37780 33489 34423 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43317000 28032 246 26331 52650 42500 42500 1 9606 Homo sapiens 0.027710604361800506 TVYSILR Unmodified 850.49125 0.49125301 3389 Q53XC0;P05198;H0YJS4;G3V4T5 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 3 0 1 49.933 50.008 2 0.0062973 14130 20230619_1882_Aki_TMTPro18x_K_F3 134.12 62.765 286900 276550 221110 185230 427890 815950 258630 336650 817370 37371 31231 70593 62869 43833 77173 64038 56364 60919 265080 252420 233350 202720 427790 765380 287150 368300 767260 57018 70487 69416 64191 47167 76999 63897 54161 57877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207630000 28033 3389 26332 52651 42501 42501 1 9606 Homo sapiens 0.060027037313943765 TVYVELLPK Unmodified 1060.6168 0.61684746 1769 Q4G0J3-3;A0A8I5KUI4;Q4G0J3;A0A8Q3SHG9;A0A8Q3SHN7;H0YA82;A0A8Q3SHF1;A0A8Q3SHH4;A0A8Q3WK75;A0A8I5KSZ3;A0A8I5KQG7;A0A8I5KYN2;D6RFF0;A0A8Q3SHL6 LARP7 La-related protein 7 yes no 0 0 0 4.5 3.5 1 1 60.1 60.1 2;3 1.0438E-06 17835 20230619_1888_Aki_TMTPro18x_K_F8 143.12 97.403 16130 12532 14390 15351 12520 18821 18838 16268 25310 19273 15540 20347 23192 18226 14754 22894 25378 24573 14897 11500 14751 15315 13376 18697 18809 16882 25021 19369 16762 20520 23034 19128 15781 22998 24173 23325 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21803000 28034 1769 26333 52652;52653 42502;42503 42503 2 9606 Homo sapiens 0.0889637079694694 TVYVSVLPTTADF Unmodified 1411.7235 0.72349737 1736 P41252;Q59G75;A0A804HJN6;A0A804HL54;A0A804HHW9;Q7Z355;Q6P0M4;B4DVX2;Q7L4K8;Q9P1N9 IARS;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 6.33 0.471 2 1 65.131 65.158 2;3 8.4729E-08 20393 20230619_1886_Aki_TMTPro18x_K_F6 143.7 123.08 9666.2 7443 8969.4 10502 7271 10757 8452.8 10179 8743.9 11643 11046 10675 11102 7295.1 10592 12154 11568 11442 8929.5 6840.2 9155.1 10353 7741.5 10835 8474.8 10474 8996.7 11649 11226 10769 11290 7903.6 10843 12090 11058 10875 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88155000 28035 1736 26334 52654;52655;52656 42504;42505;42506 42504 3 9606 Homo sapiens 0.03410456500796499 TWDHFWLNEGHTVYLER Unmodified 2202.0283 0.028287021 1222 A0A140VK27;P09960;B4DVZ8;P09960-2;P09960-4;P09960-3 LTA4H Leukotriene A-4 hydrolase;Leukotriene A(4) hydrolase yes no 0 0 0 7 0 1 56.947 57.003 4 2.5711E-23 16599 20230619_1887_Aki_TMTPro18x_K_F7 199.05 180.52 57750 51073 70365 66631 45745 79266 53425 54958 93981 71302 52598 70009 82621 71433 92598 73341 62096 85606 53523 46872 70059 66160 49952 78560 54694 58270 91794 71249 57384 71092 83837 73763 92199 74424 59870 81093 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 96332000 28036 1222 26335 52657 42507;42508 42508 2 9606 Homo sapiens -0.024645990929911932 TWEGWEPWM Oxidation (M) 1236.491 0.49099502 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 4.5 1.12 1 1 1 1 65.071 65.104 2 0.001194 20456 20230619_1883_Aki_TMTPro18x_K_F4 114.59 101.53 31280 28864 35677 31812 33037 39165 33966 39866 36300 42684 42371 40124 44883 33773 43713 46386 44236 49054 28980 26442 35814 32005 34558 39063 34304 40722 37129 42886 43289 40651 45638 35745 44516 46548 42353 46545 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82070000 28037 3758 26336 52658;52659;52660;52661 42509;42510 42509 2447 2 9606 Homo sapiens -0.11779084050795063 TWEGWEPWM Unmodified 1220.4961 0.4960804 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4.5 1.12 1 1 1 1 66.493 66.527 2 0.0075033 20954 20230619_1886_Aki_TMTPro18x_K_F6 89.673 78.183 36941 30076 36774 40181 26412 35444 35439 35436 42599 37980 37866 44334 50948 39735 36555 48467 45272 45554 34156 27618 37240 39681 28556 36181 35445 36291 42801 38451 39677 44557 50883 41607 37971 48368 43234 43298 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 36208000 28038 3758 26336 52662;52663;52664;52665 42511;42512;42513 42513 3 9606 Homo sapiens -0.10534780188163495 TWELSLYELHR Unmodified 1445.7303 0.73031409 1303 B4DVB5;A0A1U9X8F2;A0A1U9X8F1;Q06587;B4DW57;B4DMN3 RING1 E3 ubiquitin-protein ligase RING1 yes no 0 0 0 7 0 1 56.991 57.046 3 1.9365E-23 16625 20230619_1887_Aki_TMTPro18x_K_F7 230.41 199.68 43559 36788 46704 44507 43006 40501 42135 36329 45480 48282 51361 55440 51242 52839 50109 59276 47926 57789 40310 33741 47097 44273 44876 41197 42658 37762 46400 48381 52450 55864 52303 54879 50911 59360 45945 54868 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32142000 28039 1303 26337 52666 42514 42514 1 9606 Homo sapiens 0.025278141720264102 TWEQQQEVVSR Unmodified 1388.6684 0.66844211 2457;2620 Q59FH4;H0Y5J4;B4DDU5;Q9UJU6-5;Q9UJU6;B4DKZ4;B4DXL9;Q9UJU6-2;Q9UJU6-3;B4DDD6;Q9UJU6-4;Q9UJU6-6 DBNL Drebrin-like protein no no 0 0 0 3.5 0.5 1 1 41.926 41.978 2 4.6626E-06 10435 20230619_1882_Aki_TMTPro18x_K_F3 171.55 146.63 63752 54868 58962 61286 59416 72269 72851 65384 82326 81430 88169 78318 85932 79507 77814 87187 90444 80554 58932 50283 60332 61525 62108 72089 72952 67712 83553 81371 90017 79727 87438 82346 80015 87107 86346 76617 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116670000 28040 2457;2620 26338 52667;52668 42515 42515 1 9606 Homo sapiens -0.010345372471192604 TWESVKR Unmodified 904.47667 0.47666558 1968 A6NFX8;Q9UKK9;A6NJU6;A6NCQ0;C9JYY9 NUDT5 ADP-sugar pyrophosphatase yes no 0 0 1 1.5 0.5 1 1 39.333 39.366 3 0.023769 9513 20230619_1881_Aki_TMTPro18x_K_F2 94.662 51.596 331450 287500 341310 309460 402580 328210 341480 350050 126550 305540 325730 254670 272490 228650 356120 241360 309090 179900 306680 263380 346420 311240 410170 331410 341660 354850 149830 309050 322350 260140 283570 237350 357370 239360 295290 171990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 296430000 28041 1968 26339 52669;52670 42516 42516 1 9606 Homo sapiens 0.020606315832424116 TWFQEYMNSK Unmodified 1332.5809 0.58087266 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2;H3BPA9 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 2 0 1 61.565 61.575 3 0.028045 19319 20230619_1881_Aki_TMTPro18x_K_F2 57.019 41.818 54276 52299 61101 47006 48965 57214 53567 57981 81050 68787 53368 58824 63936 56425 65124 65616 115420 68884 50295 47825 61230 48123 52004 57134 54613 59431 79923 68673 56569 60048 65080 58780 68952 65975 109630 65562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98566000 28042 4222 26340 52671 42517 42517 1 9606 Homo sapiens -0.07211454442199283 TWFSIPEK Unmodified 1006.5124 0.51238239 2183 B0YJ76;P00374;B4DM58;A0A024RAQ3;P00374-2;C9JJ68;B3KV46;Q86XF0 DYR;DHFR;DHFRL1 Dihydrofolate reductase;Dihydrofolate reductase, mitochondrial yes no 0 0 0 2 0 1 61.045 61.056 2 0.0012069 19053 20230619_1881_Aki_TMTPro18x_K_F2 146.58 90.908 100570 78183 87136 88843 69202 106110 86088 89299 114980 66958 66680 58179 65566 59412 76676 60026 60131 49990 92864 71688 89402 89089 74078 105530 86718 91789 113410 68721 70608 59540 67507 61254 76764 59823 57623 47625 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62606000 28043 2183 26341 52672 42518 42518 1 9606 Homo sapiens 0.009386690402379827 TWHAWMDNIR Unmodified 1328.6084 0.60842481 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32 VARS Valine--tRNA ligase yes no 0 0 0 2 0 1 51.667 51.712 3 5.8993E-14 15190 20230619_1881_Aki_TMTPro18x_K_F2 219.03 195.36 81863 58032 82092 89396 70949 100230 93702 89897 115790 108740 79812 78134 104360 73891 96442 114320 109450 104530 75635 53406 83285 87793 75387 100200 93813 93049 115340 107990 84659 80584 105290 78591 99020 113620 104560 99404 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96686000 28044 725 26342 52673 42519 42519 1 9606 Homo sapiens -0.04273506391314186 TWIEVSGSSAK Unmodified 1163.5823 0.58225287 1833 P61619;A0A8V8TMZ5;B4DR61;B3KNF6;C9JXC6;A0A8V8TMZ3;P61619-3;B3KME8;F8W776;Q8TC24;B3KQ68;Q9H9S3-2;Q9H9S3-3;Q9H9S3;B3KNG2;Q9NVQ7 SEC61A1;SEC61A2 Protein transport protein Sec61 subunit alpha isoform 1;Protein transport protein Sec61 subunit alpha isoform 2 yes no 0 0 0 7.5 0.5 1 1 51.338 51.415 3 2.5116E-06 14232 20230619_1887_Aki_TMTPro18x_K_F7 149.94 123.9 231140 201910 243390 254400 254490 265310 292070 286740 288470 314870 323990 295360 334010 293050 260120 335910 347980 352370 213910 185240 246470 252790 264220 267990 292250 292190 295650 316050 330920 300790 337180 304670 271070 337570 332120 334490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 375590000 28045 1833 26343 52674;52675 42520;42521 42520 2 9606 Homo sapiens 0.007005029181982536 TWIPEVHDQK Unmodified 1251.6248 0.62478638 3008 G3V529;Q9GZR7;B4DM03;Q59FS7 DDX24 ATP-dependent RNA helicase DDX24 yes no 0 0 0 5.5 0.5 1 1 47.512 47.59 3 0.00077588 12875 20230619_1886_Aki_TMTPro18x_K_F6 81.525 41.9 148570 139040 159430 161220 149130 172350 159370 172350 173830 185130 182030 182940 232170 169560 182560 197200 206350 179780 137590 127430 160910 161200 156020 173450 160650 176380 176750 186310 188550 185370 232810 176920 187890 196740 197020 171040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205020000 28046 3008 26344 52676;52677 42522 42522 1 9606 Homo sapiens 0.009038980464310953 TWLDSAK Unmodified 819.41267 0.41266834 3431 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;A0A994J847;Q29RX4;A0A2R8YCW8;A0A3B3ITP0;P11171-7;A0A2R8Y5Z6;A0A2R8Y7Y3;A0A2R8Y5G2;A0A2R8Y570;A0A2R8Y420;A0A3B3IU06;A0A2R8YFR9;A0A2R8Y6G5;A0A2R8Y7N0;A0A2R8Y6D0;A0A3B3ITC5;A0A2R8Y6T6 EPB41 Protein 4.1 yes no 0 0 0 7.5 0.5 1 1 50.43 50.509 2 0.0063643 13822 20230619_1887_Aki_TMTPro18x_K_F7 140.98 59.603 151610 134550 156900 144610 135450 155490 139430 138460 172020 132570 149310 139330 138290 121430 170520 147880 164760 123030 140300 123250 158520 145450 142580 156070 141440 142500 172350 134600 153790 140610 143060 127180 172370 146890 157410 117280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121570000 28047 3431 26345 52678;52679 42523 42523 1 9606 Homo sapiens -0.004261485737060866 TWNDPSVQQDIK Unmodified 1429.6838 0.68375782 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 4.8 0.748 2 2 1 50.592 50.65 2;3 5.0002E-24 14012 20230619_1885_Aki_TMTPro18x_K_F5 307.97 252.89 1012200 852780 998680 1014500 1016200 1248500 1179400 1186600 1340900 1342900 1317500 1349200 1513300 1214500 1360100 1493500 1572100 1463200 936040 782040 1016200 1014500 1059700 1243000 1184800 1220300 1356400 1349100 1361700 1364900 1530700 1272400 1398100 1494300 1501300 1390400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3057099999.9999995 28048 3429 26346 52680;52681;52682;52683;52684 42524;42525;42526;42527 42527 4 9606 Homo sapiens -0.013896704499074986 TWNLGLSNAK Unmodified 1102.5771 0.57710791 3435 Q59EZ3;P11717;A0A7I2V381 IGF2R Cation-independent mannose-6-phosphate receptor yes no 0 0 0 3 0 1 54.901 54.948 3 0.0020158 16336 20230619_1882_Aki_TMTPro18x_K_F3 74.76 40.874 39153 36490 38678 42206 44058 58142 48892 51423 54316 42728 40808 40595 42027 32604 47329 42536 39781 41449 36232 33442 39450 42362 45545 57403 49178 52743 54465 43601 42578 41046 43082 34437 47591 42542 38147 39374 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24766000 28049 3435 26347 52685 42528 42528 1 9606 Homo sapiens 0.029922438462108403 TWQANLR Unmodified 887.46135 0.46134987 3393 P06730;P06730-2;Q32Q75;X5D7E3;D6RBW1;P06730-3;B7Z2T1;H0Y8J7 EIF4E Eukaryotic translation initiation factor 4E yes no 0 0 0 1.5 0.5 1 1 42.231 42.271 2 0.0084502 10846 20230619_1881_Aki_TMTPro18x_K_F2 120.65 69.073 558040 463430 541910 487100 635190 682970 641970 609540 752800 348240 366480 297790 325040 262870 509960 315680 383180 285070 515930 424530 552920 492890 652580 674220 649960 620730 743930 365230 392350 303870 341830 275170 507190 315330 367170 271440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 354570000 28050 3393 26348 52686;52687 42529 42529 1 9606 Homo sapiens 0.013117647860440229 TWTQTYK Unmodified 926.44978 0.44978213 3433 P11388;P11388-2;P11388-3;P11388-4 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 2 0 1 46.043 46.122 2 0.0037314 12638 20230619_1881_Aki_TMTPro18x_K_F2 161.9 105.49 205100 179810 207360 188470 161180 236720 206940 192040 269060 198700 196710 146080 210420 144070 182720 174420 195110 144560 189750 164680 209720 190370 172860 234610 207910 199460 267470 199080 205460 150780 212800 150460 186900 173180 186210 137810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191140000 28051 3433 26349 52688 42530 42530 1 9606 Homo sapiens -0.016384770279614713 TWTTADFR Unmodified 996.46649 0.46649483 1708 A0A7P0TAE3;Q9ULX6;A0A7P0TAJ5;A0A140VKH3;Q9ULX6-2;B3KMD4;A0A7P0T847;A0A7P0TBP0;V9GZ50;A0A7P0T9N5;A0A7P0TAD3;Q9UF73 AKAP8L;DKFZp434L0650 A-kinase anchor protein 8-like yes no 0 0 0 7 0 1 48.756 48.843 2 0.035473 13079 20230619_1887_Aki_TMTPro18x_K_F7 75.189 60.983 224180 161400 209610 218020 202470 244720 243760 235440 267500 277430 281350 297410 303230 263100 277070 315000 321580 276740 207020 148300 214120 215850 212180 245130 244140 242310 271810 278720 289100 299830 307610 275160 284850 313500 306940 263420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90752000 28052 1708 26350 52689 42531 42531 1 9606 Homo sapiens -0.03187976141998661 TWTVVDAK Unmodified 918.48108 0.48108226 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 7.2 0.748 1 2 2 51.434 51.511 2;3 6.4709E-06 14557 20230619_1886_Aki_TMTPro18x_K_F6 164.72 110.32 412250 349660 389040 375470 434290 500450 476100 454800 560020 528310 555180 547600 627730 513080 501620 580910 609110 578320 381100 320350 397800 378900 448950 495600 480140 469660 565600 530750 572850 553930 632300 534090 518640 582350 581540 549430 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1735199999.9999998 28053 3444 26351 52690;52691;52692;52693;52694 42532;42533;42534 42532 3 9606 Homo sapiens 0.01858096006139931 TWVASNEIK Unmodified 1046.5397 0.53965977 301 A0A2R8Y7Z8;H7C148;B7Z6J7;A0A024R4R3;O75175 CNOT3 CCR4-NOT transcription complex subunit 3 yes no 0 0 0 7 0 1 49.696 49.781 2 0.0018056 13489 20230619_1887_Aki_TMTPro18x_K_F7 125.82 70.447 34189 29990 35939 41676 43719 44988 44499 42069 48390 43296 44002 47066 40900 36746 43870 43533 48287 40898 31641 27543 36513 41153 44783 45173 44932 43226 48896 43810 45251 47243 42004 38586 44796 43499 46107 38900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24826000 28054 301 26352 52695 42535 42535 1 9606 Homo sapiens 0.01825152580613576 TYADYESVNECMEGVCK Oxidation (M) 2069.8016 0.80164241 392 P84090;A0A024R6D4;G3V279 ERH Enhancer of rudimentary homolog yes no 0 1 0 3 0.816 1 1 1 48.972 49.032 3 1.3017E-18 13972 20230619_1881_Aki_TMTPro18x_K_F2 180.74 177.45 347390 280510 302870 351460 339970 314450 372370 350310 334180 412120 452490 385380 444140 377450 377730 517390 448560 476550 320850 257410 312160 348630 350510 321810 372470 357170 347610 412190 457840 392690 450390 397000 389980 514950 428690 452960 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 934020000 28055 392 26353 52696;52697;52698 42536;42537;42538;42539 42536 253 4 9606 Homo sapiens -0.19046634820733743 TYADYESVNECMEGVCK Unmodified 2053.8067 0.80672779 392 P84090;A0A024R6D4;G3V279 ERH Enhancer of rudimentary homolog yes no 0 0 0 4.14 1.25 1 1 2 2 1 54.548 54.592 3;4 1.2866E-18 16432 20230619_1881_Aki_TMTPro18x_K_F2 184 180.94 653590 553240 622290 645320 536470 622400 626920 660700 667090 861740 770180 776680 888200 736950 758650 973920 861880 961100 604250 507240 633590 644080 566740 632090 628560 677580 682580 857130 790540 791090 896510 774240 780660 973470 824330 912630 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 3100099999.9999995 28056 392 26353 52699;52700;52701;52702;52703;52704;52705 42540;42541;42542;42543;42544;42545 42540 6 9606 Homo sapiens -0.1780233095814765 TYAEPLTAAMVEFYTMSQER Oxidation (M) 2353.0606 0.060634286 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 0 8 0 1 64.829 64.85 3 6.56E-08 19869 20230619_1888_Aki_TMTPro18x_K_F8 104.23 94.95 12368 9391 14459 15987 14097 13984 13121 16773 16154 15731 16879 15746 15967 18765 15070 19454 18788 19503 11447 8651.3 14513 15569 14632 14351 13398 16908 16316 15956 17236 16101 16322 19270 15570 19530 17945 18521 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59516000 28057 3881 26354 52706 42546 42546 2562 1 9606 Homo sapiens -0.06177360587162184 TYAEPLTAAMVEFYTMSQER Unmodified 2337.0657 0.065719664 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 7.5 0.5 1 1 66.166 66.188 3 3.1482E-45 20413 20230619_1888_Aki_TMTPro18x_K_F8 258.9 250.4 17191 14294 17834 16782 12596 19347 19686 18829 18966 19179 18094 20422 20702 20153 22324 21965 20687 28394 15903 13107 17987 16784 13722 19344 19419 19283 19331 19403 18747 20662 21139 20894 22582 22403 19863 26872 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109580000 28058 3881 26354 52707;52708 42547 42547 1 9606 Homo sapiens -0.049330567245306156 TYAICGAIR Unmodified 1023.5172 0.51715019 3742 Q8WVC2;Q6FGH5;P63220;Q9BYK1 RPS21 40S ribosomal protein S21 yes no 0 0 0 1.5 0.5 1 1 45.024 45.106 2 0.00061411 12158 20230619_1881_Aki_TMTPro18x_K_F2 129.55 98.942 369870 374130 253450 250810 705990 1329000 517030 512420 1627500 42557 30016 85498 75230 56283 120010 68774 77933 75147 341620 341430 274730 277080 699650 1241800 564320 566450 1526200 73976 107940 84106 78269 59681 118630 69437 74953 71318 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 694750000 28059 3742 26355 52709;52710 42548;42549 42549 2 9606 Homo sapiens 0.006332299113523732 TYCCDLK Unmodified 958.38884 0.38883813 3996 Q53G34;Q9Y6C9;B4DHQ0 MTCH2 Mitochondrial carrier homolog 2 yes no 0 0 0 5.5 0.5 1 1 42.883 42.971 2 0.0072494 10746 20230619_1886_Aki_TMTPro18x_K_F6 126.67 71.284 493680 335140 495280 528710 625290 694450 641060 657530 774000 625190 563630 564340 818200 632400 513210 554670 782440 656100 456020 308580 505230 519920 639790 688450 649340 673130 772690 632210 599020 577790 812380 646590 542180 564310 745160 622550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 259450000 28060 3996 26356 52711;52712 42550;42551;42552 42551 3 9606 Homo sapiens -0.09202073394067156 TYCCGTYR Unmodified 1079.4164 0.41644987 841 A0A087WWP8;Q5VWQ0 RSBN1 Round spermatid basic protein 1 yes no 0 0 0 7 0 1 34.061 34.143 2 0.0074216 6978 20230619_1887_Aki_TMTPro18x_K_F7 107.66 79.152 17410 10852 15672 10533 19115 25630 19388 17655 27311 3385.8 2629.9 2553 2938.9 2185.5 7980.4 3248 4577.6 2947.6 16061 9946.9 16093 10872 19644 24574 19751 18196 26312 4217 3883.5 2630.6 3238.3 2324.7 7811.3 3245.1 4401.4 2808.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4666900 28061 841 26357 52713 42553 42553 1 9606 Homo sapiens -0.12008170133822205 TYCYLLPTFAFAHK Unmodified 1730.849 0.84904901 693 A0A024RBS6;F5H1S9;G8JLB3;E5KMT6;E5KMT5;Q9Y606-2;Q9Y606;F5GXL3 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial yes no 0 0 0 6 0 1 62.38 62.432 3 0.00063872 19187 20230619_1886_Aki_TMTPro18x_K_F6 96.464 80.326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28062 693 26358 52714 42554 42554 1 9606 Homo sapiens 0.0128584508536278 TYDAASYICEAAFDEVK Unmodified 1951.851 0.85095909 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 4.5 0.5 1 1 62.984 63.011 3 2.2654E-09 19303 20230619_1885_Aki_TMTPro18x_K_F5 133.71 117.05 123040 100070 129600 127500 114210 144400 120530 136320 106960 121020 109750 98371 114670 89587 123710 113070 108020 98665 113820 91847 130870 126750 120100 144490 120880 139360 109970 122380 112670 100640 117220 93984 124710 112490 103440 93900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 904330000 28063 3578 26359 52715;52716 42555 42555 1 9606 Homo sapiens -0.08689235477982038 TYDATTHFETTCDDIK Unmodified 1916.8098 0.80982255 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q8TB95;B3KVE3 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 0 3.71 1.03 1 2 2 2 47.038 47.105 3;4 1.4178E-42 12801 20230619_1882_Aki_TMTPro18x_K_F3 227.41 216.62 793480 579090 767810 789850 734280 810230 842540 805480 811720 1095900 984290 1011300 1168100 922680 906500 1223100 1108700 1215800 733010 532110 781740 780560 768050 817600 842590 831020 837220 1088800 1009900 1027500 1173500 971060 939340 1222800 1059600 1154400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2718300000 28064 2533 26360 52717;52718;52719;52720;52721;52722;52723 42556;42557;42558;42559 42557 4 9606 Homo sapiens -0.11190996517484564 TYDLLFK Unmodified 898.48002 0.48001963 3687 P61026;Q53SX4 RAB10 Ras-related protein Rab-10 yes no 0 0 0 1 0 1 60.753 60.753 2 0.012321 18789 20230619_1880_Aki_TMTPro18x_K_F1 115.46 54.316 201780 154130 169380 188150 129940 173670 159930 170720 218690 257160 210180 274030 332140 285510 161600 471210 418020 503370 186250 141430 174290 187030 139330 176610 161420 176940 219510 255790 221590 278030 327380 304030 183220 471220 398070 477450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295610000 28065 3687 26361 52724 42560 42560 1 9606 Homo sapiens 0.026718816372408583 TYDPSGDSTLPTCSK Unmodified 1627.7036 0.70356657 4712 Q9Y2X3;B3KN82 NOP58 Nucleolar protein 58 yes no 0 0 0 4.33 0.471 2 1 46.851 46.911 2;3 1.0585E-05 12505 20230619_1883_Aki_TMTPro18x_K_F4 84.173 65.345 158990 90873 129600 143590 102970 183220 131360 154120 272670 184960 175480 230710 262820 237200 175270 304950 292830 375210 146510 83744 133860 141090 110770 181330 135130 160220 265700 186970 188670 232390 261600 248090 186990 308810 279610 355330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255510000 28066 4712 26362 52725;52726;52727 42561;42562 42561 2 9606 Homo sapiens -0.08517707292116938 TYDSYLGDDYVR Unmodified 1465.6361 0.63613893 2791 CON__Q0IIK2;CON__Q29443 yes no 0 0 0 3 0 1 51.875 51.941 2 5.239899999999999E-40 15007 20230619_1882_Aki_TMTPro18x_K_F3 292.68 274.81 + 67137 51628 56234 52959 64515 92184 58927 53578 70566 54185 68057 82440 65524 65124 63646 85170 89365 111390 61973 47299 58154 53886 66425 89318 60099 57433 71071 55657 69934 81829 66969 68786 66299 86646 85408 105440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67091000 28067 2791 26363 52728 42563 42563 1 -0.07805369440757204 TYDYLFK Unmodified 948.45928 0.45928418 452;3060 A0A024R7I3;P61006;P61006-2;B3KTE3;H0YMN7;B4DMS1;H0YLJ8;H0YL94;H0YNE9;Q92930 RAB8A;RAB8B Ras-related protein Rab-8A;Ras-related protein Rab-8B no no 0 0 0 8 0 1 57.821 57.873 2 0.0073086 16925 20230619_1888_Aki_TMTPro18x_K_F8 126.2 69.793 225990 188080 206620 230130 224120 250780 239280 222540 258970 275030 268720 247560 295650 232140 218710 312140 288180 296220 208840 172530 211910 229200 231890 251400 240990 230750 263270 274330 276190 252190 297150 244300 228110 311190 275110 281490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145450000 28068 452;3060 26364 52729 42564 42564 1 9606 Homo sapiens -0.01700708742430379 TYEAALETIQNMSK Oxidation (M) 1613.7607 0.76068752 3207 O00231;O00231-2 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 1 0 7 0 1 57.071 57.127 3 0.00052536 16635 20230619_1887_Aki_TMTPro18x_K_F7 92.65 72.543 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28069 3207 26365 52730 42565 42565 1887 1 9606 Homo sapiens -0.021642400157361408 TYEAALETIQNMSK Unmodified 1597.7658 0.76577289 3207 O00231;O00231-2 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 8 0 1 62.551 62.577 3 0.00027192 18884 20230619_1888_Aki_TMTPro18x_K_F8 93.348 64.335 1366900 1115700 1132200 1318500 1127300 1347000 1344700 1198100 1521000 1733200 1698800 1604200 1864000 1448300 1430400 2129700 1782800 1990400 1262100 1023200 1170800 1315200 1178700 1356600 1348600 1249100 1547900 1718900 1740700 1630100 1875900 1535800 1485600 2119000 1703800 1891200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 596210000 28070 3207 26365 52731 42566 42566 1 9606 Homo sapiens -0.009199361531273098 TYEDDSPEWFK Unmodified 1415.5881 0.5881261 2794 CON__Q28107;A0A0A0MRJ7;P12259 F5 Coagulation factor V;Coagulation factor V heavy chain;Coagulation factor V light chain yes no 0 0 0 3.5 0.5 1 1 57.201 57.22 3 0.058618 17326 20230619_1882_Aki_TMTPro18x_K_F3 43.781 38.058 + 50352 44792 51038 52260 50593 61579 53512 52347 78038 56485 54484 57708 54701 53650 61252 61939 59813 66631 46589 41060 51795 52291 52753 61344 54530 54232 77116 56967 57055 58385 56195 55891 62097 62373 57290 63211 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75490000 28071 2794 26366 52732;52733 42567 42567 1 9606 Homo sapiens -0.1030444336081473 TYEDMTLEELEDHEDEFNEEDER Unmodified 2916.1403 0.14033699 4501 Q9H2J4 PDCL3 Phosducin-like protein 3 yes yes 0 0 0 1 0 1 60.596 60.596 3 1.9998E-13 18776 20230619_1880_Aki_TMTPro18x_K_F1 134.86 134.82 10517 6755.3 9274.6 11410 7463.8 9673.3 10177 9811.5 11965 15923 13006 13597 12012 11607 15125 14586 17202 14568 9702.5 6227.1 9512.3 11108 7985.1 9908.3 10161 10180 12150 15687 13263 13830 12452 12192 15435 14612 16421 13847 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21533000 28072 4501 26367 52734 42568 42568 1 9606 Homo sapiens -0.2410875675141142 TYEHFNAMGK Oxidation (M) 1212.5234 0.52335778 1810 P16435;Q59ED7;A8K3B4;B2R6E5;Q63HL4;A0A8V8NE24;H0Y4R2;B4DJI8;A0A8V8P1G2 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase yes no 0 1 0 7 0 1 38.479 38.543 3 0.00037832 8671 20230619_1887_Aki_TMTPro18x_K_F7 102.52 84.659 52839 44304 54292 56478 67721 66227 62823 55825 77763 67025 69966 68805 74069 59144 62062 83931 77322 77633 48877 40658 55235 56154 69096 66016 64067 58071 78055 67230 72310 69479 74889 62646 64284 83521 73836 73802 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42593000 28073 1810 26368 52735 42569;42570 42570 1165 2 9606 Homo sapiens -0.07440296647814648 TYEHFNAMGK Unmodified 1196.5284 0.52844316 1810 P16435;Q59ED7;A8K3B4;B2R6E5;Q63HL4;A0A8V8NE24;H0Y4R2;B4DJI8;A0A8V8P1G2 POR;DKFZp686G04235 NADPH--cytochrome P450 reductase yes no 0 0 0 7 0 1 42.973 43.052 3 5.7549E-07 10502 20230619_1887_Aki_TMTPro18x_K_F7 120.09 79.061 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28074 1810 26368 52736 42571 42571 1 9606 Homo sapiens -0.0619599278518308 TYEIWHR Unmodified 1003.4876 0.48756462 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8Y7I0;A0A2R8Y7M9 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 0 7.5 0.5 1 1 42.37 42.409 3 2.4281E-06 10240 20230619_1887_Aki_TMTPro18x_K_F7 192.28 167.36 92482 83595 97389 91531 93560 107930 98379 97286 127190 112830 118550 120860 142930 115530 100990 153800 142630 137920 85609 76583 98430 92047 97683 107670 99826 100540 127590 113500 123070 122220 143110 121370 106020 152890 136030 131180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184590000 28075 1005 26369 52737;52738 42572;42573 42572 2 9606 Homo sapiens -0.014039660424714384 TYELLNCDK Unmodified 1154.5278 0.52777445 4312 Q92979;A8K6D2;A0A087WVM7;V9GYP5;B4DQC7;A0A087WWQ2;A0A0U3B3H7;B4DP65 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes no 0 0 0 4 0 1 50.981 51.012 2 0.031318 14443 20230619_1883_Aki_TMTPro18x_K_F4 71.614 25.188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28076 4312 26370 52739 42574 42574 1 9606 Homo sapiens -0.04330832224900405 TYELQNQLAACTR Unmodified 1566.746 0.7460405 4434 Q9BTV5;M0R366;M0R2F6;B4DIC5 FSD1 Fibronectin type III and SPRY domain-containing protein 1 yes no 0 0 0 7 0 1 48.169 48.256 2 1.7653E-15 12799 20230619_1887_Aki_TMTPro18x_K_F7 218.75 192.24 27179 21882 22538 31177 23169 24757 24332 23195 26233 30567 30914 30086 30935 29758 29643 34127 32258 33036 25093 20109 23338 30615 24053 25486 24532 24024 26827 30481 31495 30558 31534 30922 30336 34153 30844 31386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21534000 28077 4434 26371 52740 42575 42575 1 9606 Homo sapiens -0.014662673732118492 TYETASLK Unmodified 911.46001 0.46001246 831 A0A2R8Y473;A0A590UJS8;B4DGL8;A0A087WW65;B3KM98;A0A0S2Z2Z3;A0A5F9ZA98;O75027-3;O75027;O75027-2;A0A0S2Z2W5 ABCB7 ATP-binding cassette sub-family B member 7, mitochondrial yes no 0 0 0 6 0 1 43.727 43.819 2 0.011631 11147 20230619_1886_Aki_TMTPro18x_K_F6 96.492 35.53 55167 41539 51635 60711 61696 68998 69051 64778 77670 62377 71252 58790 62159 52767 58377 58846 73279 65705 50959 38194 52963 59810 63502 69019 69435 66415 78314 63094 72921 59684 63565 54971 60249 59423 69916 62362 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34987000 28078 831 26372 52741 42576 42576 1 9606 Homo sapiens 0.0007408590661270864 TYEVSLR Unmodified 866.44978 0.44978213 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;F5GWI0;F5H2L3 DDB1 DNA damage-binding protein 1 yes no 0 0 0 5.5 0.5 1 1 42.692 42.78 2 0.007007 10697 20230619_1886_Aki_TMTPro18x_K_F6 128.57 48.189 276050 224890 256110 267220 297650 316400 289350 268340 343830 321840 360280 364440 368440 320840 290780 377050 413250 358780 255090 206260 262490 267030 305680 315190 293900 278970 347820 323810 369150 366610 372250 335270 304260 376750 393830 341170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 490910000 28079 1710 26373 52742;52743 42577;42578 42578 2 9606 Homo sapiens 0.011215229720505704 TYFEDNPR Unmodified 1040.4563 0.45632407 4627 Q9NY93-2;Q9NY93;Q53HB9;H7BZN7 DDX56 Probable ATP-dependent RNA helicase DDX56 yes no 0 0 0 2 0 1 40.728 40.802 2 4.1811E-06 10172 20230619_1881_Aki_TMTPro18x_K_F2 153.71 125.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28080 4627 26374 52744 42579 42579 1 9606 Homo sapiens -0.06228583867255111 TYFGPYDETTCIDWTDDSR Unmodified 2340.9481 0.94810695 3924 Q15269 PWP2 Periodic tryptophan protein 2 homolog yes yes 0 0 0 3 0 1 62.092 62.121 3 0.031087 19314 20230619_1882_Aki_TMTPro18x_K_F3 45.707 42.42 20873 18958 19064 23138 19905 22726 20016 23214 27531 23860 24816 23632 24549 16526 25116 27892 26574 27995 19300 17385 19552 23016 20636 23023 20417 23694 27505 24072 25571 23775 25065 17904 25627 27839 25422 26583 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10972000 28081 3924 26375 52745 42580 42580 1 9606 Homo sapiens -0.16872918059652875 TYFTDKK Unmodified 901.45453 0.45453316 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2;A0A7P0Z484;A0A7P0TAR9;A0A7P0Z4H2;Q6ZP56;D6RFL1 CANX Calnexin yes no 0 0 1 1.5 0.5 1 1 43.537 43.578 3 0.017579 11466 20230619_1881_Aki_TMTPro18x_K_F2 84.568 43.995 2079400 1534700 2443000 2290500 2929500 2558800 2641700 2969800 3002900 1846600 2163600 1929100 1926500 1540800 2564500 1623300 2084500 1552900 1924400 1411600 2456900 2254900 2990500 2577000 2692200 2974300 3001700 1929900 2249000 1942700 2003200 1606800 2564600 1629500 1995400 1477600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1105800000 28082 1700 26376 52746;52747 42581;42582;42583 42582 3 9606 Homo sapiens -0.0001359288519324764 TYGEIFEK Unmodified 985.47566 0.47566253 345 A0A024R5K6;O95298-2;O95298;E9PRJ5 NDUFC2 NADH dehydrogenase [ubiquinone] 1 subunit C2 yes no 0 0 0 5.5 0.5 1 1 53.435 53.507 2 0.010092 15264 20230619_1885_Aki_TMTPro18x_K_F5 99.802 71.29 120900 113830 131810 140000 154560 179630 161620 147810 177460 140180 166110 168670 184510 153040 161750 175470 186730 190380 111980 104390 133410 139720 158970 177880 162990 153040 179320 143060 171790 169480 186640 159590 166330 176770 178450 180650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95438000 28083 345 26377 52748;52749 42584;42585 42584 2 9606 Homo sapiens -0.017656275763329177 TYGEPESAGPSR Unmodified 1249.5575 0.55749468 3617 P50402;A0A804HIV7;Q5HY57 EMD Emerin yes no 0 0 0 2.5 0.5 1 1 34.506 34.565 2 1.0341E-23 7470 20230619_1881_Aki_TMTPro18x_K_F2 253.29 219.91 199980 150660 172260 193260 222540 227110 216290 220880 284610 269640 318080 335880 318860 276770 267630 309380 371760 327970 184620 138330 178150 192090 227040 226980 220550 227360 287350 271940 324840 335910 323100 289120 279000 311320 354390 311470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 500080000 28084 3617 26378 52750;52751 42586;42587 42586 2 9606 Homo sapiens -0.05730176955216848 TYGESMLYLDGQR Oxidation (M) 1547.6926 0.69260795 4713 Q9Y305-3;Q9Y305-2;Q9Y305;Q9Y305-4;Q9H2R8 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial yes no 0 1 0 4 0 1 47.731 47.771 3 0.0053443 12963 20230619_1883_Aki_TMTPro18x_K_F4 68.809 55.673 85294 68303 82254 90588 94720 93160 95050 104300 129440 96619 107500 100630 100780 91928 91118 103580 112610 109760 78836 62719 84033 89688 97383 94278 96884 105550 128930 98235 110960 101730 102690 95712 94078 104220 107510 104200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23547000 28085 4713 26379 52752 42588;42589 42589 2875 2 9606 Homo sapiens -0.05933064875785021 TYGGCEGPDAMYVK Oxidation (M) 1562.6381 0.63812954 479 E5RHG8;A0A024R7Y5;Q15369;R4GMY8 TCEB1 Transcription elongation factor B polypeptide 1 yes no 0 1 0 4 0.816 1 1 1 45.675 45.741 3 4.7527E-07 12020 20230619_1883_Aki_TMTPro18x_K_F4 133.15 127.87 229210 177740 199800 217580 200660 198390 220770 202390 211680 273670 296380 268990 295730 255260 259220 333310 302930 305170 211650 163100 205490 216230 208720 202280 221240 208490 219780 272510 299870 273030 300130 267850 267060 331900 289430 290140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 578250000 28086 479 26380 52753;52754;52755 42590;42591 42590 296 2 9606 Homo sapiens -0.12068400018847569 TYGGCEGPDAMYVK Unmodified 1546.6432 0.64321492 479 E5RHG8;A0A024R7Y5;Q15369;R4GMY8 TCEB1 Transcription elongation factor B polypeptide 1 yes no 0 0 0 4.5 0.5 1 1 49.922 49.978 3 2.7228E-05 13727 20230619_1885_Aki_TMTPro18x_K_F5 109.84 96.708 471630 342400 416980 445620 370140 426040 478500 405610 518830 634810 570870 587620 621810 550860 526080 664710 637950 650730 435380 314470 427640 441270 391330 431840 477370 422170 528990 627750 585560 597230 628680 575420 543590 664970 609390 618170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 350220000 28087 479 26380 52756;52757 42592;42593 42593 2 9606 Homo sapiens -0.10824096156216001 TYGNTDGPETGFSAIDTDER Unmodified 2144.9134 0.913436 4632 Q9NYV4-2;Q9NYV4 CDK12 Cyclin-dependent kinase 12 yes no 0 0 0 1 0 1 51.142 51.142 3 0.0019137 14817 20230619_1880_Aki_TMTPro18x_K_F1 62.589 58.928 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28088 4632 26381 52758 42594 42594 1 9606 Homo sapiens -0.1132241787604471 TYGQSTYSR Unmodified 1061.4778 0.47778779 1235 C9JX88;A0A140VK70;P35998;Q75L23;C9JLS9;B7Z571 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 6.5 1.12 1 1 1 1 32.864 32.915 2 5.0593E-05 6471 20230619_1887_Aki_TMTPro18x_K_F7 183.43 120.97 234180 112970 241500 276920 347400 391690 288720 327040 355680 185640 227700 207200 216120 188190 264030 117950 275120 202470 216040 104950 246530 267250 351050 385460 296560 334640 352940 196200 239120 208730 223320 191160 267380 124900 262620 191680 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 215590000 28089 1235 26382 52759;52760;52761;52762 42595;42596;42597;42598 42597 4 9606 Homo sapiens -0.050491988385147124 TYGTTTAPR Unmodified 966.47706 0.47705951 319 A0A024R542;Q9C0C2;B3KXS7;E9PKK0 TNKS1BP1 182 kDa tankyrase-1-binding protein yes no 0 0 0 6.5 0.5 1 1 32.034 32.097 2 0.00076802 6579 20230619_1886_Aki_TMTPro18x_K_F6 124.08 111.84 11266 6186.8 15053 11351 13465 20080 16157 15623 17997 9784.6 15539 19387 12798 13275 16343 10054 18469 12890 10425 5714.4 14939 11149 14215 19513 16193 16111 18090 10508 15973 19023 13338 13708 16636 10340 17612 12233 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11492000 28090 319 26383 52763;52764 42599 42599 1 9606 Homo sapiens -0.00751993487585878 TYGVSFFLVK Unmodified 1159.6277 0.6277465 1292;4740 A0A1S5UZ07;Q9Y490;Q9Y4G6 TLN1;TLN2 Talin-1;Talin-2 no no 0 0 0 5 0 1 63.085 63.132 3 0.0056727 19376 20230619_1885_Aki_TMTPro18x_K_F5 71.349 48.629 40256 32740 35351 35380 38475 63824 42520 42700 66388 33209 35111 37492 34036 35387 37257 41180 37922 47114 37185 30001 36396 35879 40056 61838 43343 44809 64918 34299 37469 37812 34988 36857 37891 41608 36341 44653 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17764000 28091 1292;4740 26384 52765 42600 42600 1 9606 Homo sapiens 0.05431773171221721 TYHALSNLPK Unmodified 1142.6084 0.60840804 3207 O00231;O00231-2;B4DTS5;J3QS13 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 2.5 0.5 1 1 43.374 43.45 3 0.00028329 11416 20230619_1881_Aki_TMTPro18x_K_F2 113.93 66.103 177830 130080 184590 181980 231440 227890 219950 198630 236500 164610 162610 140910 159560 125950 177070 167060 205570 156020 164380 119560 187610 180070 236130 226310 222850 204070 236900 167630 170110 143750 163790 132650 181240 166640 196070 148490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193090000 28092 3207 26385 52766;52767 42601 42601 1 9606 Homo sapiens 0.04280816880304883 TYHSVGDSVLR Unmodified 1232.6149 0.61494998 3435 Q59EZ3;P11717;A0A7I2V381;A0A7I2YQS7 IGF2R Cation-independent mannose-6-phosphate receptor yes no 0 0 0 6 0 1 37.611 37.686 3 4.9384E-05 8611 20230619_1886_Aki_TMTPro18x_K_F6 131.43 93.03 43395 23445 35403 45511 49987 51236 45808 45338 47484 45006 52787 55498 49859 39550 45272 45516 48643 51877 39980 21676 36904 44165 50640 51212 46480 46729 48488 45815 53799 55307 50736 41652 46304 46003 46531 49194 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69283000 28093 3435 26386 52768 42602 42602 1 9606 Homo sapiens 0.007947100410547137 TYHYHCALHDK Unmodified 1443.6354 0.63536784 1028 A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0;Q5JRC6;Q8IWS0-4;Q8IWS0-2;A0A8I5QJH7;A0A8I5KVG8 PHF6 PHD finger protein 6 yes no 0 0 0 7.5 0.5 1 1 31.791 31.84 4 0.004011 6290 20230619_1888_Aki_TMTPro18x_K_F8 74.392 66.216 19203 5391.9 17422 18062 25090 19993 23099 21784 22922 20938 22391 20500 26405 16514 14218 23285 22921 21198 17670 5067.7 17957 17203 25338 20105 23394 22108 23347 21190 23145 20711 26208 17549 15202 23145 21834 20162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29199000 28094 1028 26387 52769;52770 42603 42603 1 9606 Homo sapiens -0.06870442570811974 TYHYHCGVQDK Unmodified 1406.6037 0.60373336 1028 A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0;Q5JRC6;B4E138 PHF6 PHD finger protein 6 yes no 0 0 0 6.2 0.748 1 2 2 32.501 32.569 3;4 8.1393E-05 6361 20230619_1887_Aki_TMTPro18x_K_F7 113.61 100.73 123180 23429 94262 109410 149610 105430 131180 135520 132510 121270 145150 138500 152390 131300 96975 150950 147810 157310 113130 22363 99011 103210 150100 107570 133370 135980 135420 123820 148530 139690 152710 136710 102690 151570 141000 149310 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 253530000 28095 1028 26388 52771;52772;52773;52774;52775 42604;42605;42606 42606 3 9606 Homo sapiens -0.08330435324774044 TYINPFVSFLDQR Unmodified 1598.8093 0.80929269 2646 B4E205;O95486;O95486-2 SEC24A Protein transport protein Sec24A yes no 0 0 0 3 0 1 64.097 64.127 3 0.077195 20200 20230619_1882_Aki_TMTPro18x_K_F3 39.005 0 27591 23564 26538 28446 26153 28907 25760 33388 30837 29166 29891 33117 36506 31309 33032 37915 35007 38156 25512 21611 27048 28342 27196 29299 26183 33666 31101 29816 31026 33389 36887 32702 33787 37995 33497 36226 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19607000 28096 2646 26389 52776 42607 42607 1 9606 Homo sapiens 0.03384041406320648 TYIPPKGETK Unmodified 1132.6128 0.61282471 772 Q5T7C4;B7Z965;Q59GW1;A0A024RDR0;P09429;A0A286R9D9;B3KQ05;B2RPK0;D3DQY9;Q75MM1;A0A286R9F1 HMGB1;HMGB1P1;hCG_1991922;WUGSC:H_NH0244E06.1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 0 0 1 3.67 3.09 1 1 1 41.628 41.653 3 0.00078196 10124 20230619_1888_Aki_TMTPro18x_K_F8 97.911 80.886 310300 210260 326670 321350 452920 407390 405510 391280 339510 367580 459670 291670 288300 216670 488160 147280 223730 130360 286740 193520 332250 316440 458150 405140 409670 400110 354360 370260 457720 297150 308520 222480 476370 149410 215980 124340 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 679790000 28097 772 26390 52777;52778;52779 42608;42609;42610 42610 3 9606 Homo sapiens 0.05182281303223135 TYIQCIAAISR Unmodified 1294.6704 0.67035637 2126 A8K8U1;Q86VP6;Q86VP6-2;H0YH27;Q86VP6-3 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 4 0 1 55.593 55.603 2 0.00045343 16465 20230619_1883_Aki_TMTPro18x_K_F4 131.54 106.65 248620 218780 220220 209540 234950 280820 247380 255360 297870 139810 127460 109670 122240 115800 179960 146280 131100 106680 229780 200220 226250 213490 243520 278010 250190 259460 293320 146890 138590 113120 127800 120770 179100 144430 125740 101830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169090000 28098 2126 26391 52780 42611 42611 1 9606 Homo sapiens 0.03480800237116455 TYIQTELPFK Unmodified 1238.6547 0.65468953 1591 B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A669KAV7;O95785-4;O95785-3;A0A2R8YFV2;O95785;B3KR89;O95785-2 WIZ Protein Wiz yes no 0 0 0 1 0 1 59.545 59.545 3 0.0030855 18303 20230619_1880_Aki_TMTPro18x_K_F1 85.958 48.767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28099 1591 26392 52781 42612 42612 1 9606 Homo sapiens 0.0449083699172661 TYLASVK Unmodified 780.43815 0.43815481 621 B7Z6Y2;A0A024RAF1;A0A024RAJ2;A0A024RAI5;A0A024RAI6;A0A024RAI4;A0A024RAF0;A0A024RAE9;A0A024RAG8;A0A024RAF6;A0A024RAJ3;A0A024RAG9;O00499-2;O00499-5;O00499-3;O00499-6;O00499-11;O00499-4;O00499-8;O00499-7;O00499-10;O00499-9;O00499;Q9BTH3;B7Z2Z2;Q8WWH9 BIN1 Myc box-dependent-interacting protein 1 yes no 0 0 0 2 0 1 47.118 47.193 2 0.0078817 13146 20230619_1881_Aki_TMTPro18x_K_F2 112.17 32.718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28100 621 26393 52782 42613 42613 1 9606 Homo sapiens 0.03915325948719328 TYLGEEGK Unmodified 895.42871 0.42871234 514 A0A024R8E4;Q9BV86-2;Q9BV86;S4R338 C9orf32;NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed yes no 0 0 0 3 0 2 41.283 41.342 2;3 0.014644 11088 20230619_1882_Aki_TMTPro18x_K_F3 93.374 67.297 32563 22348 37107 33184 32889 42506 45887 53876 38380 35354 50265 56096 44128 45047 44781 30159 58538 62187 30115 20561 37247 32760 34848 42492 45318 53725 39949 37320 50796 55596 45320 46047 46199 32388 55901 58713 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27210000 28101 514 26394 52783;52784 42614;42615 42615 2 9606 Homo sapiens -0.023184871274679608 TYLGEEGKR Unmodified 1051.5298 0.52982336 514 A0A024R8E4;Q9BV86-2;Q9BV86;S4R338 C9orf32;NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed yes no 0 0 1 5 0.816 1 1 1 37.056 37.124 3 0.00084226 8395 20230619_1886_Aki_TMTPro18x_K_F6 105.2 73.773 218710 219250 276670 224400 329300 269440 292610 245220 254430 245370 292240 182390 223280 150940 371590 108520 139930 103270 202970 200670 276590 227030 335840 268870 296010 252270 262830 246060 294630 187060 236500 154730 361000 110360 135870 98272 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 175600000 28102 514 26395 52785;52786;52787 42616;42617 42617 2 9606 Homo sapiens 0.006119645752505676 TYLLDFR Unmodified 926.48617 0.48616764 3835 Q13131;Q13131-2 PRKAA1 5'-AMP-activated protein kinase catalytic subunit alpha-1 yes no 0 0 0 1 0 1 57.579 57.579 2 0.060775 17504 20230619_1880_Aki_TMTPro18x_K_F1 75.243 20.718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28103 3835 26396 52788 42618 42618 1 9606 Homo sapiens 0.01998399868762135 TYLPSQVSR Unmodified 1049.5506 0.55055881 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258 COPB2 Coatomer subunit beta' yes no 0 0 0 1.5 0.5 1 1 42.305 42.344 2 0.00029179 10882 20230619_1881_Aki_TMTPro18x_K_F2 141.02 125.94 117900 96975 114630 121540 141810 144250 148800 143490 163170 139170 144860 134280 149970 121250 130350 163700 159820 141370 109000 88985 117170 121030 145230 144150 150030 146510 164640 140780 149640 136210 151960 127750 134700 162480 152500 134580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 384960000 28104 3031 26397 52789;52790 42619 42619 1 9606 Homo sapiens 0.027765549549030766 TYLQALPYFDR Unmodified 1385.698 0.69795133 1669 O75306;A0A7I2V4X8;B7Z792;O75306-2;A0A7I2YQG7;A0A7I2V596;Q53HG2;A0A7I2V4G5;A0A7I2YQD8;A0A7I2V3J6;A0A7I2V2B9;A0A7I2V4W5;A0A7I2V410;A0A7I2V630;A0A7I2V5G4;A0A7I2V5E2;B7Z9L2;A0A7I2V5D5;A0A7I2V517 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 2 0 1 61.896 61.906 2 0.00024043 19475 20230619_1881_Aki_TMTPro18x_K_F2 125.74 105.04 113240 76067 94926 133020 108550 144300 121430 120980 153550 98804 105560 91853 110910 108920 115780 128110 118490 113790 104450 70139 98424 129630 112310 144360 122630 124650 152520 101000 110730 94295 113390 112730 117860 127610 113310 108240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 236790000 28105 1669 26398 52791 42620 42620 1 9606 Homo sapiens 0.02053026769021926 TYLSEGPYYVK Unmodified 1318.6445 0.64451877 2051 A8K4T6;Q16401-2;Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes no 0 0 0 8 0 1 54.529 54.596 3 0.0089557 15546 20230619_1888_Aki_TMTPro18x_K_F8 68.484 46.01 59125 53621 56771 67651 51594 65830 60757 57719 69250 77719 58041 84600 90470 81204 62043 107060 92824 112410 54690 49189 57864 67122 54330 66505 60992 60095 69740 77688 61660 85400 90030 85233 65543 107310 88651 106640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96963000 28106 2051 26399 52792 42621 42621 1 9606 Homo sapiens -0.0020577073350978026 TYNNLDVSVTK Unmodified 1252.6299 0.62993134 125 H0YHF8;F8VZX1;H0YIC9;F8VYY9;A0A024R125;P54619-2;P54619;P54619-3 PRKAG1 5'-AMP-activated protein kinase subunit gamma-1 yes no 0 0 0 7 0 1 49.612 49.696 2 0.032061 13438 20230619_1887_Aki_TMTPro18x_K_F7 76.927 57.833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28107 125 26400 52793 42622 42622 1 9606 Homo sapiens 0.013721571183623382 TYPVNTPER Unmodified 1075.5298 0.52982336 4403 Q99543-2;Q99543;Q08AR5 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed yes no 0 0 0 4 0 1 36.972 37.016 2 0.00016085 8336 20230619_1883_Aki_TMTPro18x_K_F4 145.72 125.94 68526 48433 57001 75202 73938 87654 77416 87045 97463 78489 85368 82812 91902 78221 82092 91357 99138 87963 63222 44578 59241 73849 75660 87615 78467 88704 97620 79950 88420 83764 93147 81526 84634 91386 94612 83625 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55698000 28108 4403 26401 52794 42623 42623 1 9606 Homo sapiens -0.004920354247587966 TYQASSAAFR Unmodified 1100.5251 0.52507234 4296 Q92567;Q92567-2 FAM168A Protein FAM168A yes no 0 0 0 8 0 1 39.394 39.381 2 0.0001493 9220 20230619_1888_Aki_TMTPro18x_K_F8 140.49 127.86 53099 41492 44269 43361 66638 66302 54551 54277 64859 23581 22730 22363 21883 17754 33211 23446 25621 18707 49018 38017 46024 43953 67104 65054 55985 55446 63704 25523 25294 22631 22910 18763 33096 23240 24539 17843 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18076000 28109 4296 26402 52795 42624 42624 1 9606 Homo sapiens -0.021169195675156516 TYQELLVNQNPIAQPLASR Unmodified 2154.1433 0.14331678 4617 Q9NX24;D6RC52;D6RCB9;J3QSY4 NHP2 H/ACA ribonucleoprotein complex subunit 2 yes no 0 0 0 2 0 1 60.908 60.919 3 6.0553E-25 18992 20230619_1881_Aki_TMTPro18x_K_F2 209.54 201.04 43734 37597 41432 43409 40597 42130 44169 41210 46175 47781 44594 42585 48264 45797 51775 52111 45733 49867 40435 34466 42274 43356 42310 42699 44396 42354 46893 47786 45996 43590 49334 47452 52257 52145 43844 47372 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 709080000 28110 4617 26403 52796 42625 42625 1 9606 Homo sapiens 0.11241085318215482 TYQSITER Unmodified 996.48762 0.4876242 4113 Q6NX51;Q96A65;Q8TAR2;Q96A65-2 EXOC4 Exocyst complex component 4 yes no 0 0 0 4.5 0.5 1 1 37.338 37.406 2 0.001075 8497 20230619_1883_Aki_TMTPro18x_K_F4 149.57 126.53 81085 56048 76788 75933 100390 101600 90131 95562 119680 91421 93776 105910 107100 92775 99031 92488 117100 106410 74871 51509 78698 75381 102120 100650 92374 97895 119180 93117 98101 106360 108540 96124 101790 93763 111790 100960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75928000 28111 4113 26404 52797;52798 42626;42627 42626 2 9606 Homo sapiens -0.01076010833151031 TYQVKPIR Unmodified 1003.5815 0.581465 1169 F8VQZ7;A0A140VJE3;P50579-2;P50579;F8VRR3;P50579-3;Q96B43 METAP2 Methionine aminopeptidase 2;Methionine aminopeptidase yes no 0 0 1 4 0.816 1 1 1 38.967 39.029 3 0.032567 9138 20230619_1883_Aki_TMTPro18x_K_F4 69.598 50.818 157190 121270 145690 190090 248790 261860 243580 220660 246010 198520 219820 163800 179990 142920 185410 216440 211820 133430 145210 111590 150810 187050 249980 258310 245780 227670 249290 200880 224680 167480 185190 151940 190050 211610 201870 127900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192750000 28112 1169 26405 52799;52800;52801 42628 42628 1 9606 Homo sapiens 0.07981753059800667 TYRPELIK Unmodified 1018.5811 0.58113065 3972 Q496C9;Q8TEA8;A0A2R8YCT7;A0A2R8Y6X2;A0A087WZV9 DTD1 D-tyrosyl-tRNA(Tyr) deacylase;D-tyrosyl-tRNA(Tyr) deacylase 1 yes no 0 0 1 1.5 0.5 1 1 43.416 43.457 3 0.002426 11618 20230619_1880_Aki_TMTPro18x_K_F1 110.87 50.282 966860 701310 743080 901910 755280 836130 824040 778850 922100 878170 902810 791200 866480 704290 887100 994090 957140 699380 891680 644010 774520 893230 786090 849220 829940 802720 933030 879690 925010 804920 886350 744420 906080 977630 913320 668340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 607670000 28113 3972 26406 52802;52803 42629;42630 42629 2 9606 Homo sapiens 0.07258333339950696 TYRPLNDVHIK Unmodified 1354.7357 0.73573382 266 A0A024R3V4;H7BZ14;Q9H2H8;B8ZZ77;A0A0S2Z5A8;Q9H2H8-2 PPIL3 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase-like 3 yes no 0 0 1 2 0 1 42.06 42.139 4 0.00085625 10802 20230619_1881_Aki_TMTPro18x_K_F2 98.156 58.155 217590 179930 188660 209970 231690 240620 237590 256110 242380 260230 287430 266740 294130 243240 256960 291760 328200 315260 200990 164990 194820 210040 237320 241400 239440 260580 248550 262890 292920 269850 298210 254340 266060 293620 313240 299240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155600000 28114 266 26407 52804 42631 42631 1 9606 Homo sapiens 0.07255537754508623 TYSEFCSR Unmodified 1048.4284 0.42839476 1584 A0A8Q3SIN5;D3DVA5;V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;B4DJ49;B7Z977 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 0 0 0 4.5 0.5 1 1 39.825 39.891 2 0.00092219 9490 20230619_1885_Aki_TMTPro18x_K_F5 153.04 145.1 40053 33313 38400 47650 49052 53071 40512 37953 47199 46981 46838 51751 56383 41606 45359 53213 55772 55636 37027 30611 39353 46970 49885 52903 41553 40085 47731 47156 48516 51960 56684 43897 46934 53399 53260 52818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63776000 28115 1584 26408 52805;52806 42632 42632 1 9606 Homo sapiens -0.09388230118975116 TYSILCSEEYTIQNR Unmodified 1875.8673 0.86727785 3977 Q68DW7;Q4LE48;Q8WVM7-2;Q8WVM7;B4E2Q7 DKFZp781D1416;STAG1 variant protein;STAG1 Cohesin subunit SA-1 yes no 0 0 0 6 0 1 56.185 56.26 3 2.4162E-05 16562 20230619_1886_Aki_TMTPro18x_K_F6 101.75 89.961 110170 114610 113510 104370 111590 133410 129660 121120 186220 73042 74270 58203 68979 63908 87260 72211 64594 68510 102070 104790 114970 106740 116720 132460 131330 123310 181650 76209 81162 60066 71506 66164 87080 72282 62049 65096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67516000 28116 3977 26409 52807 42633 42633 1 9606 Homo sapiens -0.03562109521203638 TYSLGSALR Unmodified 966.51345 0.51344502 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;A0A1B0GVG8 VIM;HEL113 Vimentin yes no 0 0 0 1.5 0.5 1 1 46.26 46.3 2 0.00011562 12696 20230619_1881_Aki_TMTPro18x_K_F2 153.08 110.17 135000 98427 117630 118930 223240 341660 196310 179730 301540 117080 118760 110490 113070 98236 155480 120960 123930 100780 124610 90327 122700 121160 223810 324530 202420 192970 293380 122060 130220 112160 117680 102900 155420 120190 118720 96017 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149310000 28117 3414 26410 52808;52809 42634 42634 1 9606 Homo sapiens 0.02884883409149097 TYSLGSALRPSTSR Unmodified 1494.7791 0.77905519 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;A0A1B0GVG8 VIM;HEL113 Vimentin yes no 0 0 1 6 1.41 1 1 1 1 1 42.352 42.412 3 1.1575E-46 10470 20230619_1886_Aki_TMTPro18x_K_F6 279.41 261.04 2324500 1706500 1987300 1736300 3913400 4526100 3131700 3199100 3678800 2605700 2408000 2108600 2338000 1968600 2751700 2521800 2487300 1672700 2145500 1563600 2075000 1787700 3894700 4333800 3217400 3339900 3665000 2653500 2526600 2160200 2408300 2063600 2774700 2479200 2376700 1600700 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 18916000000 28118 3414 26411 52810;52811;52812;52813;52814 42635;42636;42637;42638;42639 42637 5 9606 Homo sapiens 0.05145682741112978 TYSMGGAYTAEQENEPTVGVIPR Unmodified 2469.1482 0.14820374 3350 Q59HG1;O95239;O95239-2;Q6PKB2 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 0 0 0 4 0 1 55.467 55.479 3 6.3429E-26 16445 20230619_1883_Aki_TMTPro18x_K_F4 171.13 163.94 13672 9995.7 13269 12814 12363 14721 13274 13845 16506 18126 21173 24750 25869 19036 14778 23404 28313 32764 12631 9178.5 13497 12736 12953 14718 13441 14319 16827 18286 21716 24623 25717 20081 16017 23940 26990 31004 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18181000 28119 3350 26412 52815 42640 42640 1 9606 Homo sapiens -0.02760443391980516 TYSTSFTPMYHAVTK Unmodified 1732.8131 0.81305744 3371 V9HW90;P00390-2;P00390-3;P00390;P00390-5;P00390-4 HEL-75;GSR Glutathione reductase, mitochondrial yes no 0 0 0 3 0 1 50.434 50.509 3 1.3032E-09 14341 20230619_1882_Aki_TMTPro18x_K_F3 145.49 134.86 66360 53597 62342 66544 60999 80809 69820 66223 93665 66562 63355 61343 62374 50108 58862 71181 72556 70503 61326 49180 63687 66313 63861 80260 70596 68680 92784 67164 66368 62152 63538 53194 60740 71111 69275 66979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99658000 28120 3371 26413 52816 42641 42641 1 9606 Homo sapiens -0.024036568821429682 TYSVEYLPK Unmodified 1098.5597 0.55972651 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4;A0A804HJC2 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 7 0 1 52.563 52.634 3 0.0015851 14754 20230619_1887_Aki_TMTPro18x_K_F7 90.601 78.624 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28121 3299 26414 52817 42642 42642 1 9606 Homo sapiens 0.01438903520556778 TYSVGVCTFAVGPEQGGCK Unmodified 2015.9081 0.90809681 3435 Q59EZ3;P11717;B4DUY7 IGF2R Cation-independent mannose-6-phosphate receptor yes no 0 0 0 4.5 3.5 1 1 56.31 56.338 3 6.3359E-15 16327 20230619_1888_Aki_TMTPro18x_K_F8 162.59 137.39 87381 67134 77699 96236 85678 92636 87142 89724 105410 103510 96407 101710 110730 97657 94214 117430 121440 130910 80694 61709 79959 94696 88437 93865 88353 92247 106050 103840 99992 103200 111830 101930 97726 118370 116000 124160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 128000000 28122 3435 26415 52818;52819 42643;42644;42645 42645 3 9606 Homo sapiens -0.05922091473257751 TYSVVPMTSR Oxidation (M) 1155.5594 0.55940893 3758 P78527;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 1 0 1 41.002 41.002 2 0.0011998 10490 20230619_1880_Aki_TMTPro18x_K_F1 105.1 81.129 113170 91344 110250 114530 145790 154340 132340 142530 165750 77787 112910 120710 93733 100850 114070 78420 151140 129900 104610 83824 112800 114270 148270 152760 135220 144660 164520 83548 117590 119920 97463 103450 117460 82171 144110 122910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105680000 28123 3758 26416 52820 42646 42646 2448 1 9606 Homo sapiens -0.01214839470935658 TYSVVPMTSR Unmodified 1139.5645 0.56449431 3758 P78527;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 1.5 0.5 1 1 45.595 45.636 2 0.0015051 12416 20230619_1881_Aki_TMTPro18x_K_F2 106.18 90.739 279780 229960 243830 268280 241850 324420 298620 290380 324690 220670 218530 191440 205520 165610 232920 233450 250520 202980 258430 210860 250900 268530 253430 322860 298520 297150 324720 226060 228560 195020 211500 175300 237320 231800 239200 193290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149650000 28124 3758 26416 52821;52822 42647 42647 1 9606 Homo sapiens 0.0002946439167317294 TYSYLTPDLWK Unmodified 1385.6867 0.68671794 3457;4261 P15880;Q6IPX5;Q3KQT6;Q8N5L9;H0YEN5;Q8J014;E9PQD7;Q9BSW5;O60249;A4D0Y7;Q8NI62 RPS2;rps2;LOC392781;OK/KNS-cl.6 40S ribosomal protein S2 no no 0 0 0 1 0 1 62.514 62.514 3 3.139E-09 19504 20230619_1880_Aki_TMTPro18x_K_F1 182.28 164.19 148430 127290 153920 142600 132650 171220 156240 168130 171270 153300 120880 105140 146730 116740 141690 156470 143270 129330 137330 116660 155540 143220 140290 170850 156690 171490 171680 154300 127470 109420 148670 122190 144330 155050 136960 123180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182270000 28125 3457;4261 26417 52823 42648 42648 1 9606 Homo sapiens 0.009302046748871362 TYTAYVDLEK Unmodified 1201.5867 0.58666954 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 0 5.67 0.471 1 2 54.567 54.641 2;3 0.00011258 15830 20230619_1886_Aki_TMTPro18x_K_F6 108.43 83.64 158730 136780 156710 181000 141430 165290 171940 182840 175260 219700 206220 234530 252290 216150 235910 260070 260560 292030 146810 125560 159290 178930 148970 168710 171800 186570 179860 220400 212390 236730 255270 225950 241680 262350 249280 276920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1600699999.9999998 28126 1102 26418 52824;52825;52826 42649;42650 42650 2 9606 Homo sapiens -0.006060326589022225 TYTHEVVTLWYR Unmodified 1566.7831 0.78307794 653 A0A024RB77;G3V5T9;P24941;A0A024R8R3;Q00526;K7EJ83 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 yes no 0 0 0 2 0 1 53.034 53.067 3 0.001022 15792 20230619_1881_Aki_TMTPro18x_K_F2 88.163 54.287 44561 35907 40650 46203 41257 51747 45748 49199 56106 55678 54779 56235 57520 51152 58745 61063 57362 69298 41170 32960 41669 45877 43000 51827 46199 50599 56533 55944 56407 56891 58689 53465 59656 61655 54980 65689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12734000 28127 653 26419 52827 42651 42651 1 9606 Homo sapiens 0.02235772234871547 TYTIANQFPLNK Unmodified 1408.7351 0.73506511 4414 Q9BR63;Q9NSD9;A8K666;B7ZB32;Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 4 0.816 1 1 1 57.401 57.434 3 1.6646E-07 17321 20230619_1882_Aki_TMTPro18x_K_F3 163.84 139.5 319120 288200 303500 331510 310640 389220 340180 357350 432890 359030 330970 351720 371190 328680 370560 410590 349820 382070 295150 264140 309940 332020 323440 388390 344150 367240 431620 362730 346350 356650 377650 344050 375910 409600 335130 363080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 493840000 28128 4414 26420 52828;52829;52830 42652;42653 42652 2 9606 Homo sapiens 0.04704698314799316 TYTQLVR Unmodified 879.48142 0.48141661 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 1.5 0.5 1 1 41.72 41.758 2 0.036792 10833 20230619_1880_Aki_TMTPro18x_K_F1 92.187 69.565 320520 233020 304880 331820 370740 398190 376320 398820 445840 337610 437090 408110 380960 362940 404260 389090 454500 395180 296050 214220 312170 327760 380050 397520 381290 405670 449380 346800 446270 409840 392020 377020 413340 391040 433960 375500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 323910000 28129 3312 26421 52831;52832 42654 42654 1 9606 Homo sapiens 0.03685515725987898 TYVDQACR Unmodified 1011.4444 0.44437918 4565 Q9UKK6;Q9NPJ8;Q9NPJ8-3 NXT1;NXT2 NTF2-related export protein 1;NTF2-related export protein 2 yes no 0 0 0 3.5 0.5 1 1 34.286 34.342 2 0.00080224 7257 20230619_1883_Aki_TMTPro18x_K_F4 155.75 101.23 51299 29517 60591 62519 91557 96559 79512 80874 82192 54865 82168 88202 85198 75142 76297 39647 98931 87835 47418 27319 61258 60796 92253 94630 80945 82997 83477 57908 84482 87519 86465 76108 78769 43243 94360 82956 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90167000 28130 4565 26422 52833;52834 42655 42655 1 9606 Homo sapiens -0.0608852388206742 TYVGAMPGK Unmodified 922.45824 0.45823833 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0;K7ER27 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 0 0 2 0 1 46.277 46.356 2 0.0061903 12781 20230619_1881_Aki_TMTPro18x_K_F2 107.29 82.663 88119 71970 74450 79031 73518 84020 119610 78051 104190 98109 95812 108050 113650 117660 85106 110160 124390 108580 81376 65958 76825 79324 77651 84471 117310 80819 106670 98443 99561 109520 114260 120550 89339 110680 118530 103210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46638000 28131 2417 26423 52835 42656 42656 1 9606 Homo sapiens -0.006092463829645567 TYVGAMPGK Oxidation (M) 938.45315 0.45315295 2417 K7EJE8;K7EKE6;B3KU28;Q2VPA0;B3KXS5;E5KMI6;P36776-3;P36776-2;P36776;B4DPX0;K7ER27 LONP1 Lon protease homolog, mitochondrial;Lon protease homolog yes no 0 1 0 8 0 1 40.281 40.27 2 0.010928 9599 20230619_1888_Aki_TMTPro18x_K_F8 77.282 46.614 27565 22921 26146 28016 34337 35686 34065 31929 42134 34502 40258 42739 41122 32069 35476 38221 44216 41204 25480 21027 26813 27973 35007 35424 34598 32952 42367 34995 41441 42644 41662 33768 36669 38470 42200 39116 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20239000 28132 2417 26423 52836 42657 42657 1492 1 9606 Homo sapiens -0.018535502455847563 TYVGPMTESLFPGYHTK Unmodified 1926.9186 0.91858514 3283 O60568;B3KQQ3;Q9UG85 PLOD3;DKFZp564O1822 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes no 0 0 0 2 0 1 57.748 57.763 3 3.1926E-07 17767 20230619_1881_Aki_TMTPro18x_K_F2 119.56 102.07 24659 23480 25164 28218 23799 25910 25394 23897 29144 31791 26137 33528 34248 25393 27773 35490 28899 41867 22829 21525 25516 28077 24870 26339 25632 24779 29397 31751 27361 33653 34364 27025 28465 35828 27729 39650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13577000 28133 3283 26424 52837 42658 42658 1 9606 Homo sapiens -0.007797407565249159 TYVMPNAPVDEAIPLER Unmodified 1913.9557 0.95569893 2869 E5KNL5;Q14249 ENDOG Endonuclease G, mitochondrial yes no 0 0 0 4.5 0.5 1 1 59.852 59.879 3 0.00017319 18284 20230619_1883_Aki_TMTPro18x_K_F4 68.129 55.362 26292 20231 23342 26466 24386 29307 29475 26429 32255 30669 29826 33334 31212 30457 30301 36049 37877 33981 24280 18577 23998 26245 25409 29345 29499 27325 32607 30857 30806 33614 31807 31784 31276 36007 36140 32311 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23116000 28134 2869 26425 52838;52839 42659 42659 1 9606 Homo sapiens 0.03527930789232414 TYYVNHNNR Unmodified 1179.5421 0.54211939 1625 Q96PU5;Q96PU5-7;Q96PU5-5;Q96PU5-6;A0A6Q8PFI7;Q96PU5-2;Q96PU5-3;A0A6Q8PGP5;A0A6Q8PHJ5;A0A6Q8PG51;B7Z2P9;Q5XLQ3;A0A024R2A4;K7ENS6;A0A024R281;B7Z6K0;A0A7P0Z498;A0A1B0GVY1;Q96PU5-4;Q96PU5-9;K7ERN1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like yes no 0 0 0 8 0 1 29.047 29.068 3 3.1567E-07 5333 20230619_1888_Aki_TMTPro18x_K_F8 168.27 142.33 12622 7830.2 13920 9555 9046.6 10985 8556.7 11336 8623.3 6661.3 9309.9 7202.3 9010.9 6127.7 12241 5437.4 11294 11188 11663 7191.9 13929 9539 9774 11004 8682.8 11424 8799.5 6997.7 9500.7 7259.8 9347.5 6337.8 12300 5816.7 10815 10566 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13103000 28135 1625 26426 52840 42660 42660 1 9606 Homo sapiens -0.04046998961734971 TYYYNNR Unmodified 992.43519 0.4351947 1699 A0A7P0T8N8;O14776-2;O14776;G3V220;B7Z921 TCERG1 Transcription elongation regulator 1 yes no 0 0 0 7.5 0.5 1 1 36.188 36.215 2 0.0069829 7938 20230619_1888_Aki_TMTPro18x_K_F8 128.75 103.83 109980 84503 100790 107170 127290 140140 116200 121680 154390 87914 97216 89899 94502 75872 114440 84248 118050 82372 101580 77570 103590 106780 129910 138760 118960 124650 152640 90859 102310 90745 97491 79187 116030 84535 112670 78388 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 102410000 28136 1699 26427 52841;52842 42661;42662 42662 2 9606 Homo sapiens -0.0613254917610675 TYYYNTETK Unmodified 1181.5241 0.52406928 1683 A0A8Q3SIG7;A0A8V8TM87;A0A8V8TM61;F5H578;A0A7N4I394;O75400-2;O75400;O75400-3;Q05C41;H0YG38 PRPF40A Pre-mRNA-processing factor 40 homolog A yes no 0 0 0 6 0 1 43.987 44.078 2 9.8069E-12 11255 20230619_1886_Aki_TMTPro18x_K_F6 220.39 188.9 75621 59314 67505 72431 81335 87893 80851 87018 93984 95318 99718 99783 110230 86300 89597 111130 119460 96041 69845 54422 69485 72279 83395 87689 81974 89142 95270 96012 102480 100670 111160 90784 93227 110380 113850 91466 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78957000 28137 1683 26428 52843 42663 42663 1 9606 Homo sapiens -0.059431787271023495 VAAAESMPLLLECAR Unmodified 1629.8218 0.82184798 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6 IPO5;RANBP5 Importin-5 yes no 0 0 0 6.5 0.5 1 1 61.812 61.858 3 0.035723 18647 20230619_1887_Aki_TMTPro18x_K_F7 46.89 22.037 253690 209840 206530 228360 212330 231540 243450 244330 270270 244820 223250 219210 226290 207650 233570 236280 245500 248570 234230 192280 213940 229240 221040 234280 244480 248730 271950 246660 231440 223310 231340 216080 238050 237670 234800 235950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 424150000 28138 782 26429 52844;52845 42664;42665 42665 2 9606 Homo sapiens 0.03212993482702586 VAAALPGMESTQDR Oxidation (M) 1460.6929 0.6929423 342 P20340;A0A024R5J5;P20340-2;A0A024R5H8;Q6FGX3;Q53ET8;P20340-4;B7Z5Z9;P20340-3;F5H3K7 RAB6A Ras-related protein Rab-6A yes no 0 1 0 3.5 0.5 1 1 43.023 43.078 2 0.0010706 10872 20230619_1883_Aki_TMTPro18x_K_F4 91.215 75.324 60253 49595 53333 58955 56795 55699 59158 56300 61643 55658 70456 66888 59883 55974 59886 72167 63599 69968 55664 45484 54828 58735 58739 56615 59602 57490 62965 56628 71391 67076 61485 58917 61175 72102 60859 66456 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 67986000 28139 342 26430 52846;52847 42666;42667 42667 202 2 9606 Homo sapiens -0.018976451558728513 VAAALPGMESTQDR Unmodified 1444.698 0.69802768 342 P20340;A0A024R5J5;P20340-2;A0A024R5H8;Q6FGX3;Q53ET8;P20340-4;B7Z5Z9;P20340-3;F5H3K7 RAB6A Ras-related protein Rab-6A yes no 0 0 0 4.5 0.5 1 1 49.438 49.473 2;3 2.8798E-47 13546 20230619_1885_Aki_TMTPro18x_K_F5 256.48 226.23 45847 46316 48695 44695 50170 50191 51088 49544 61087 51056 48382 50655 59192 51081 52561 57166 62488 62915 42478 42370 49219 45390 51982 50368 51768 50700 61159 51535 50730 51459 59776 53011 54134 57658 59695 59695 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159250000 28140 342 26430 52848;52849 42668;42669 42669 2 9606 Homo sapiens -0.0065334129326402035 VAAALTK Unmodified 672.41703 0.41702544 2774 CON__P01966 yes yes 0 0 0 1.5 0.5 1 1 45.973 46.014 2 0.018314 12503 20230619_1881_Aki_TMTPro18x_K_F2 107.43 0 + 407310 348830 514710 454610 965150 1017400 698550 770940 911800 552160 1212900 1529700 486460 691070 1629600 307960 782230 816350 377560 320170 520340 457610 959390 980270 726530 798500 926040 599520 1202400 1477800 574620 718680 1582900 348650 756860 769860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 554150000 28141 2774 26431 52850;52851 42670;42671 42671 2 9606 Homo sapiens 0.06771360639856994 VAAASGHCGAFSGSDSSR Unmodified 1722.738 0.73799501 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;A0A494C0Y9 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 0 0 6 0 1 33.96 34.007 3 0.00036712 7282 20230619_1886_Aki_TMTPro18x_K_F6 72.583 68.482 3635.2 2359.5 2850.5 3208.8 4300.8 2631.7 5065.7 4241.4 3486.3 5500.2 2823 4780.8 3535.5 3636.3 3314.7 3605.1 3848.4 3662 3351 2169.2 2983.8 3164.5 4352.7 2747.4 5010 4256.4 3629.8 5462 2974.5 4832.9 3580.6 3784.9 3405.3 3626.8 3675.7 3478.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2272000 28142 1839 26432 52852 42672 42672 1 9606 Homo sapiens -0.09446446360652772 VAAAVPVIISR Unmodified 1094.6812 0.68117905 2747 E9PQX9;C9JCC6;Q14919;Q14919-2;E9PNC7 DRAP1 Dr1-associated corepressor yes no 0 0 0 3.5 0.5 2 2 54.003 54.037 2;3 2.4823E-05 15810 20230619_1883_Aki_TMTPro18x_K_F4 118.28 52.223 265870 220410 237080 276930 254760 285090 301900 292420 338910 288410 293210 296370 332400 274190 279330 338920 314680 329880 245640 202240 243770 275110 264600 287810 302730 298180 341250 292030 304710 299870 335470 287020 287260 338870 300850 313360 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 270140000 28143 2747 26433 52853;52854;52855;52856 42673;42674;42675 42675 3 9606 Homo sapiens 0.13762570673748087 VAAETQSPSLFGSTK Unmodified 1521.7675 0.76748745 312 A0A024R4X7;Q9UKX7-2;Q9UKX7 hCG_1989366;NUP50 Nuclear pore complex protein Nup50 yes no 0 0 0 7.5 0.5 1 1 52.587 52.661 3 4.8371E-11 14768 20230619_1887_Aki_TMTPro18x_K_F7 163.99 143.04 198800 176820 212690 212990 201400 273480 241030 233280 260650 223070 220840 221900 249510 212030 214310 273350 228850 233270 184030 162140 214820 212920 211510 270890 241330 240810 262770 226080 229720 225120 252100 222230 219680 271310 218860 221970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 750190000 28144 312 26434 52857;52858 42676;42677 42676 2 9606 Homo sapiens 0.027474409271235345 VAAGLQIK Unmodified 798.49634 0.49633839 3904 Q14974;B2RBR9;J3QR48 KPNB1 Importin subunit beta-1 yes no 0 0 0 2.5 0.5 1 1 49.579 49.647 3 0.026081 14243 20230619_1881_Aki_TMTPro18x_K_F2 65.038 6.4603 273150 221130 236510 252710 282710 319460 278760 285710 356070 208250 210760 197780 225500 185930 243780 226900 233010 197300 252280 202740 244100 253520 290170 317200 283580 292090 352160 214630 223710 201030 230580 194340 246860 225780 222800 187840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 395040000 28145 3904 26435 52859;52860 42678;42679 42678 2 9606 Homo sapiens 0.08903007593994516 VAAGTLDASTK Unmodified 1032.5451 0.54513908 2052 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;Q15003-2 NCAPH Condensin complex subunit 2 yes no 0 0 0 6 0 1 44.299 44.39 2 0.0001943 11408 20230619_1886_Aki_TMTPro18x_K_F6 136.63 99.444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28146 2052 26436 52861 42680 42680 1 9606 Homo sapiens 0.03016831372406159 VAAIEALNDGELQK Unmodified 1469.7726 0.77257283 1242 B4E0U6;A0A140VKA6;P50502;Q0IJ56;Q1XBU6;B7ZA40;H7C3I1;Q3KNR6;Q8IZP2;F6VDH7;D6W507 ST13;ST13P4;hCG_1990625 Hsc70-interacting protein;Putative protein FAM10A4 yes no 0 0 0 4.5 0.957 1 2 2 1 59.342 59.375 3;4 5.6593E-09 17617 20230619_1885_Aki_TMTPro18x_K_F5 164.11 133.04 40615 33912 39694 42056 34077 38739 40542 40212 43764 45867 45128 52533 57013 45636 48505 47873 53161 68209 37553 31112 40328 41765 36023 39461 40620 41146 44485 46246 46810 52758 57387 47468 49729 49207 50924 64514 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2062099999.9999998 28147 1242 26437 52862;52863;52864;52865;52866;52867 42681;42682 42681 2 9606 Homo sapiens 0.056477447897577804 VAALQNLVK Unmodified 954.58622 0.58621603 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 0 0 3.5 0.5 1 1 57.514 57.532 3 0.00065191 17273 20230619_1883_Aki_TMTPro18x_K_F4 107.66 62.504 171530 124920 153590 161130 177020 294370 198400 184340 287550 124460 123750 113440 120620 104950 167240 140900 147490 104380 158360 114710 158060 161360 183590 284700 201340 194280 280810 129130 134560 115520 125520 110380 167990 139070 141010 99686 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 298460000 28148 3904 26438 52868;52869 42683;42684 42684 2 9606 Homo sapiens 0.10710637202555517 VAAPDVVVPTLDTVR Unmodified 1550.8668 0.86680757 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 6.5 0.5 2 2 59.321 59.376 2;3 2.1683E-13 17868 20230619_1886_Aki_TMTPro18x_K_F6 173.72 130.5 260630 206440 269740 278700 245690 285450 277990 254280 297920 335260 337860 352160 362730 288820 322370 368860 358320 375790 241020 189610 272960 275550 258040 287380 279120 264220 304190 334940 345950 354530 367370 304350 330770 369630 342610 356790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1054799999.9999999 28149 3881 26439 52870;52871;52872;52873 42685;42686 42685 2 9606 Homo sapiens 0.11340883611865138 VAAQCSHAAVSAYK Unmodified 1461.7034 0.70344741 3131 Q9Y3E5;J3KQ48;Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes no 0 0 0 2 0 1 38.914 38.981 3 7.6722E-07 9307 20230619_1881_Aki_TMTPro18x_K_F2 130.06 112.69 183550 146360 186620 192770 213300 230850 207700 215140 253100 210190 216250 211410 213780 183900 198410 220980 244800 219560 169720 134390 189750 191350 219310 230170 211160 220700 253730 212820 223460 213680 217620 192560 204700 221340 233600 208650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 145930000 28150 3131 26440 52874 42687;42688 42687 2 9606 Homo sapiens -0.008936177108125776 VAASALNR Unmodified 800.45045 0.45045083 3992 Q53FA7;H7BZH6;Q53FA7-2 TP53I3 Quinone oxidoreductase PIG3 yes no 0 0 0 4.5 3.5 1 1 36.595 36.588 2 0.0023348 8602 20230619_1880_Aki_TMTPro18x_K_F1 128.37 75.202 91416 46012 92734 95838 155280 163800 102480 114030 136500 61162 90645 84469 69128 70087 113910 51109 97301 84291 84337 42606 95024 93438 154940 159230 107440 118470 135070 65537 94257 84236 73448 71752 113760 53734 93167 79756 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33389000 28151 3992 26441 52875;52876 42689;42690 42689 2 9606 Homo sapiens 0.04224362411741822 VAASCGAIQYIPTELDQVRK Unmodified 2218.1416 0.14160222 4152 Q7L2H7;J3KNJ2;E9PN86 EIF3M Eukaryotic translation initiation factor 3 subunit M yes no 0 0 1 1.5 0.5 1 1 57.7 57.707 3 2.4788E-11 17707 20230619_1881_Aki_TMTPro18x_K_F2 132.51 124.01 44217 33546 42428 45159 41252 42911 43731 43117 53206 59733 52475 52004 64271 44661 45003 89058 73043 82024 40854 30815 43241 44618 43005 43574 44253 44482 53703 59231 54363 52966 64276 48707 47898 88225 69678 77948 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 437430000 28152 4152 26442 52877;52878 42691;42692 42692 2 9606 Homo sapiens 0.08125708237867002 VAASLLAK Unmodified 771.48544 0.48543935 4825 yes yes 0 0 0 4 0 1 57.377 57.381 3 0.014284 17231 20230619_1883_Aki_TMTPro18x_K_F4 79.116 12.084 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28153 4825 26443 52879 42693 42693 1 9606 Homo sapiens 0.09055605219703011 VAASTFSSDSK Unmodified 1098.5193 0.51931826 2289 B2RAX6;Q9Y5J1;J3KSR7;J3QR85 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 0 0 0 6 0 1 44.196 44.288 3 0.027541 11360 20230619_1886_Aki_TMTPro18x_K_F6 58.889 42.636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28154 2289 26444 52880 42694 42694 1 9606 Homo sapiens -0.02600062869851172 VAASVLNPYVK Unmodified 1159.6601 0.66010926 3597 P48047;Q53HH2;A0A494C0K9;H7C0C1 ATP5O ATP synthase subunit O, mitochondrial yes no 0 0 0 3.5 0.5 1 1 56.123 56.145 3 0.00018133 16846 20230619_1882_Aki_TMTPro18x_K_F3 96.015 74.619 319760 243390 275150 308690 288810 347610 344670 352990 389160 345780 353810 316170 349120 296000 371690 403330 357040 362180 295200 223430 283690 306870 300770 348560 345640 359970 392400 349010 364320 321950 357530 311650 376940 401190 341790 344420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 352550000 28155 3597 26445 52881;52882 42695;42696 42695 2 9606 Homo sapiens 0.08666560574192772 VAAYAAQLEQYQK Unmodified 1481.7514 0.75144346 871 B4DGP9;B4DIV0;A0A087WZQ7;Q9H115-3;Q9H115-2;Q9H115 NAPB Beta-soluble NSF attachment protein yes no 0 0 0 8 0 1 58.446 58.493 3 0.00019001 17176 20230619_1888_Aki_TMTPro18x_K_F8 96.103 75.722 60659 50379 66241 67854 41697 49350 56412 56605 64890 70782 72921 77154 82867 69268 67588 88304 84951 90163 56137 46262 66461 66855 45666 51468 56344 57746 65974 70952 74890 77780 83538 72725 70071 88469 81149 85599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14008000 28156 871 26446 52883 42697 42697 1 9606 Homo sapiens 0.02983779480882731 VACAEEWQESR Unmodified 1363.5827 0.58266357 3313 O75663;O75663-2 TIPRL TIP41-like protein yes no 0 0 0 2 0 1 44.112 44.195 2 2.4292E-06 11767 20230619_1881_Aki_TMTPro18x_K_F2 193.01 166.89 121160 100720 109190 106460 119310 133020 132780 137110 149930 140770 136930 139120 155540 117050 130350 157050 154760 154470 111950 92267 112060 107470 123530 132620 133630 139830 151280 142020 141920 140590 156880 123660 134490 156950 147830 146750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164260000 28157 3313 26447 52884 42698 42698 1 9606 Homo sapiens -0.08458445424253114 VACCPLER Unmodified 1003.4579 0.45792075 2356 B4E0B7;B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 4.5 0.5 1 1 38.666 38.733 2 0.064968 9010 20230619_1885_Aki_TMTPro18x_K_F5 68.915 50.879 86245 59271 76245 74331 73715 91745 80005 79422 105630 102070 75091 76787 96345 76744 65554 104320 108310 85721 79592 54428 78242 74061 77091 91143 81087 82565 105030 101210 79384 79087 96225 80647 69763 103230 103060 81698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99978000 28158 2356 26448 52885;52886 42699 42699 1 9606 Homo sapiens -0.04366989374489094 VACETVAK Unmodified 876.4375 0.43750288 1192 A0A140VJP5;P31153;B4DEX8 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase yes no 0 0 0 5 0 1 40.222 40.312 2 0.0018452 9662 20230619_1885_Aki_TMTPro18x_K_F5 136.16 55.976 61948 30029 73715 74379 104500 116830 82515 101070 98412 78180 117530 125470 98947 91714 98135 55876 135670 124750 57225 27901 74369 71928 105520 114440 85032 103660 100010 81687 118920 123980 101610 93865 101620 60727 129370 117800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55556000 28159 1192 26449 52887 42700 42700 1 9606 Homo sapiens -0.005658367626438121 VACIGAWHPAR Unmodified 1236.6186 0.61859557 3567 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;Q49AJ9;B5MCW2;H7C422;B2R7Y3;Q92901 RPL3;rpl3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like yes no 0 0 0 3.5 0.5 1 1 43.966 44.023 3 4.4899E-17 11359 20230619_1882_Aki_TMTPro18x_K_F3 187.22 159.04 197430 156050 165770 168830 163070 210310 185710 193840 223470 136510 101920 107490 129330 106310 120700 170750 189430 121730 182280 143010 171040 170060 170580 209090 187060 197580 220500 140330 111560 110530 130870 113080 126930 167660 180110 116390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1613299999.9999998 28160 3567 26450 52888;52889 42701;42702 42701 2 9606 Homo sapiens 0.009751013338927805 VADAATEVQHK Unmodified 1167.5884 0.58840088 1960 Q5SW79;B2RTS4;Q5SW79-3;Q5SW79-2;A6H8X9;H0Y2V6;B4DS35 CEP170 Centrosomal protein of 170 kDa yes no 0 0 0 3 0 1 39.418 39.473 3 0.0019477 9396 20230619_1882_Aki_TMTPro18x_K_F3 81.625 63.313 43160 34457 45283 45626 56315 65831 47952 56466 61859 49501 56818 56157 52303 53511 56826 47325 58186 57562 39919 31640 45992 45413 57446 64796 49290 58107 61996 50636 58341 56613 53802 54930 57725 48272 55654 54566 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44110000 28161 1960 26451 52890 42703 42703 1 9606 Homo sapiens 0.011310211496947886 VADEGSFTCFVSIR Unmodified 1586.7399 0.73989249 1006 A0A0C4DGH0;B4DK26;A8K6Q6;Q5ZPR3;H0YL10;A8K9J6;Q5ZPR3-2;Q5ZPR3-3;Q5ZPR3-4;H0YK40;H0YK59;H0YLT8;H0YN85 CD276 CD276 antigen yes no 0 0 0 6.5 0.5 2 2 60.481 60.531 2;3 4.6739E-16 18013 20230619_1887_Aki_TMTPro18x_K_F7 207.88 179.7 90638 79998 94059 102840 85373 122710 103200 104320 157790 122230 127620 135570 135770 113280 127250 135130 136820 150720 83878 73407 95227 102210 90162 122070 104690 108320 156330 123080 132750 136240 137910 118770 130120 136290 130910 142940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252820000 28162 1006 26452 52891;52892;52893;52894 42704;42705 42705 2 9606 Homo sapiens -0.03000785604763223 VADGLPLAASMQEDEQSGR Oxidation (M) 1988.9109 0.91093358 3304 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 1 0 1.5 0.5 1 1 50.103 50.129 3 3.7133E-11 14505 20230619_1881_Aki_TMTPro18x_K_F2 142.72 140.3 91726 70269 92883 101900 102910 120820 113480 114820 139350 108520 107670 110470 120760 100340 108510 117630 124060 126230 84791 64600 94483 100510 106460 120540 114580 117540 139170 110140 112550 111730 122260 104780 111460 118390 118560 119800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 169480000 28163 3304 26453 52895;52896 42706;42707 42707 1931 2 9606 Homo sapiens -0.04396544814767367 VADGLPLAASMQEDEQSGR Unmodified 1972.916 0.91601896 3304 O75396 SEC22B Vesicle-trafficking protein SEC22b yes yes 0 0 0 2.33 0.471 2 1 56.011 56.035 2;3 2.7231000000000004E-25 16756 20230619_1882_Aki_TMTPro18x_K_F3 214.54 209.43 55632 46809 53485 57498 46658 59419 59371 60153 70754 60641 62883 64421 69624 55154 62186 75674 75731 79035 51434 42940 54444 57220 49425 59936 59484 61420 71092 61389 65193 64943 70484 58308 64189 75856 72351 75020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 612320000 28164 3304 26453 52897;52898;52899 42708;42709 42709 2 9606 Homo sapiens -0.031522409521357986 VADGMVFGALLPCEECSGQLVFK Unmodified 2526.1957 0.19568798 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 8 0 1 65.074 65.093 3 1.4263E-05 20046 20230619_1888_Aki_TMTPro18x_K_F8 90.968 82.025 4232 3746.7 4220.3 4065.6 2589.2 3700.3 4721.3 3779.7 2938.8 4390.4 4947.3 4444.1 4453 3459.6 4262.3 4592.2 4904.8 5170.6 3915.1 3432.4 4264.4 4077.6 2876.7 3771 4583.3 3876.2 3177.2 4401.6 4957.8 4477.7 4548.5 3663.7 4375 4627.5 4688.5 4904 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150630000 28165 261 26454 52900 42710 42710 1 9606 Homo sapiens -0.006362037170219992 VADIGLAAWGR Unmodified 1127.6087 0.60874239 1439 A0A384MTQ3;P23526 AHCY Adenosylhomocysteinase yes no 0 0 0 1.5 0.5 1 1 59.994 60.005 2 6.9972E-17 18481 20230619_1880_Aki_TMTPro18x_K_F1 204.36 173.13 238130 207090 228250 232180 186520 227630 195110 196210 227890 318580 275800 243160 336360 231410 279090 295930 299420 281090 220200 189780 232060 232420 197520 229870 197440 205890 232770 313010 283110 249870 338240 242840 286000 295480 286160 267200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 279180000 28166 1439 26455 52901;52902 42711;42712 42711 2 9606 Homo sapiens 0.05004236600166223 VADISGDTQK Unmodified 1032.5088 0.50875357 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299;H7C597 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 0 3.5 0.5 1 1 43.73 43.787 3 4.6282E-05 11177 20230619_1883_Aki_TMTPro18x_K_F4 115.42 83.004 214900 168190 243810 221190 351470 475250 324830 322200 577000 181750 194770 213710 198690 180080 196140 180970 233760 225070 198880 154440 246910 222210 356960 457390 336380 335770 556990 193190 218060 214380 202870 186910 201470 184380 223230 213340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71878000 28167 1229 26456 52903;52904 42713 42713 1 9606 Homo sapiens -0.006200455242833414 VADLTEQYNEQYGAVR Unmodified 1854.8748 0.87480607 2142 A8K9U0;Q9BWF3 RBM4 RNA-binding protein 4 no no 0 0 0 3.5 0.5 1 1 53.512 53.548 3 3.3231E-19 15618 20230619_1883_Aki_TMTPro18x_K_F4 198.23 167.34 178980 139470 189380 206760 171640 209520 207690 207970 224610 218150 223190 225590 252890 202040 215520 246370 209530 237820 165530 128240 191390 203240 180770 211500 207900 212880 227830 220160 230370 227920 255260 211580 219660 246310 200730 225870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 447070000 28168 2142 26457 52905;52906 42714;42715 42715 2 9606 Homo sapiens -0.01843633929297539 VADMALHYANK Unmodified 1231.6019 0.60194245 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 4.5 3.5 1 1 51.026 51.064 3 1.4986E-06 13950 20230619_1888_Aki_TMTPro18x_K_F8 158.05 128.98 499350 368220 470640 492710 456820 553280 485770 479030 584290 520710 508710 487890 533350 426900 494880 574790 557530 498940 461230 338260 480430 488040 476980 552990 491240 495680 586620 523220 526440 494920 541660 450230 507780 570780 532430 474910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1914599999.9999998 28169 3621 26458 52907;52908 42716;42717 42717 2 9606 Homo sapiens -0.00459444342709503 VADMALHYANK Oxidation (M) 1247.5969 0.59685707 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 1 0 7.5 0.5 1 1 45.345 45.402 3 0.0008828 11649 20230619_1888_Aki_TMTPro18x_K_F8 89.403 66.177 666030 476290 600660 671670 783010 706350 742160 652600 807520 614390 760050 608300 632320 515400 722670 715520 665240 603440 614880 437850 618590 662450 796680 710680 752420 669790 816270 623190 775650 615590 653480 545220 730070 709620 636630 574560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 825200000 28170 3621 26458 52909;52910 42718;42719 42719 2305 2 9606 Homo sapiens -0.017037482053410713 VADNAQQQYVR Unmodified 1290.6317 0.63166267 4272 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 yes no 0 0 0 4.5 0.5 1 1 37.391 37.459 2 4.2832E-12 8468 20230619_1885_Aki_TMTPro18x_K_F5 208.11 169.83 31381 18300 27656 29470 38749 40657 34462 32060 38206 34095 36936 35753 42547 30648 37923 29310 48942 33387 28937 16867 28579 28965 39251 40055 35103 33402 38665 34415 38196 36035 42999 31745 39193 29738 46613 31725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77648000 28171 4272 26459 52911;52912 42720 42720 1 9606 Homo sapiens -0.0020278907300053106 VADNSFDAK Unmodified 965.44543 0.44542503 3905 Q14978-3;B2RAU8;A0A0A0MRM9;Q14978;Q14978-2;Q96J17 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 0 0 0 4 0 1 44.572 44.616 2 0.00039699 11552 20230619_1883_Aki_TMTPro18x_K_F4 137.28 83.386 209800 121670 223160 238420 243260 289470 244200 258660 257720 232140 323470 350570 320540 276310 299190 169340 365690 351260 193750 112460 226000 231620 251220 287850 246740 265690 264210 239630 328850 347660 326240 282010 307520 182530 349140 331750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 240630000 28172 3905 26460 52913 42721 42721 1 9606 Homo sapiens -0.038679862415278876 VADPAYLPTQQDVLR Unmodified 1684.8784 0.87843489 186 A0A024R240;P50148;G9FP35;B1AM21 GNAQ Guanine nucleotide-binding protein G(q) subunit alpha yes no 0 0 0 5.5 0.5 1 1 55.465 55.535 3 1.0375E-07 16276 20230619_1886_Aki_TMTPro18x_K_F6 129.77 115.42 57290 46077 49533 60047 53492 60071 56909 62368 66214 63091 63835 67460 67650 57961 65079 74113 69286 79093 52910 42301 51085 59480 55379 60786 57487 63570 66842 63851 65806 67973 68809 60962 66508 74465 66319 75034 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84164000 28173 186 26461 52914;52915 42722;42723 42723 2 9606 Homo sapiens 0.06339080635211758 VADPTPFHIQAEVTMK Oxidation (M) 1798.8924 0.89237039 1468 A0A384NL53;P16152;E9PQ63;A8MTM1;P16152-2 CBR1 Carbonyl reductase [NADPH] 1 yes no 0 1 0 6.5 0.5 1 1 52.468 52.542 3 4.5878E-11 14997 20230619_1886_Aki_TMTPro18x_K_F6 147.09 129.81 189970 161650 187430 216820 214440 230840 220370 216930 193690 239340 264640 258100 259700 228770 244300 282120 267380 307480 175690 148420 191190 214540 220610 232030 221120 223220 201850 241150 267960 260270 264510 239770 250200 283940 255880 291630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 363710000 28174 1468 26462 52916;52917 42724;42725 42724 971 2 9606 Homo sapiens 0.024879900719952275 VADPVVTFCETVVETSSLK Unmodified 2080.0398 0.039822489 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 7 0 1 64.467 64.496 3 1.7063E-10 19873 20230619_1887_Aki_TMTPro18x_K_F7 135.27 119.64 164690 160400 177030 186730 125700 147340 162440 166250 137840 218700 202480 237190 183150 197240 193620 240860 178820 269710 152560 146990 178090 185970 135550 152460 161090 170010 144720 218550 204150 238440 188260 206930 196200 242800 171870 255530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171240000 28175 2436 26463 52918 42726 42726 1 9606 Homo sapiens 0.04300417095510056 VADQDGDSMATR Oxidation (M) 1280.5303 0.53029365 3193 Q96D15;M0QZH0 RCN3 Reticulocalbin-3 yes no 0 1 0 1 0 1 30.385 30.385 2 0.05202 6159 20230619_1880_Aki_TMTPro18x_K_F1 60.255 52.656 5007.1 2468.8 6153.3 5133.7 7969.7 10357 8267.5 7919.8 8347.2 7021.3 11072 13726 8931.3 9438.6 8714.8 4722.6 11835 10827 4627.2 2286.3 6180.4 5028.9 8149.6 10009 8321.3 8234.1 8595.2 7349 11156 13464 9186.3 9623.1 9014.2 5179 11287 10222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8985700 28176 3193 26464 52919 42727 42727 1854 1 9606 Homo sapiens -0.09875028557894439 VADSSKGPDEAK Unmodified 1202.5779 0.57789577 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;A0A7I2V5Q6;A0A7I2YQV8;F6UXX1;A0A7I2V4J0;A0A7I2V2F0;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 1 3.5 0.5 1 1 37.527 37.575 3 0.015609 8581 20230619_1883_Aki_TMTPro18x_K_F4 66.004 46.4 45158 27593 62047 53049 88354 81448 69732 76000 49621 54441 83876 75160 45928 51463 98865 33982 51730 32239 41820 25490 61946 51829 88957 80064 70835 77401 53029 56750 82830 74544 50600 52853 96636 34575 49816 30711 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45540000 28177 1680;2265 26465 52920;52921 42728 42728 1 9606 Homo sapiens -0.015290062953681627 VADTFQDYFGECSEAAIK Unmodified 2049.899 0.89897191 60 A0A024QZR5;Q9Y2T2 AP3M1 AP-3 complex subunit mu-1 yes no 0 0 0 4.5 0.5 1 1 62.613 62.639 3 0.047984 19154 20230619_1885_Aki_TMTPro18x_K_F5 42.913 32.717 34552 28515 27706 31769 30801 35492 31386 33271 39929 27781 29657 32392 32012 29171 32371 37346 37179 36202 31898 26136 28785 31869 31808 35559 31875 33997 39751 28536 31039 32581 32641 30615 33203 37320 35519 34401 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65372000 28178 60 26466 52922;52923 42729 42729 1 9606 Homo sapiens -0.08398161557897765 VADVVTPLWTVPYAEQLER Unmodified 2185.1419 0.1419198 2954 F2Z2W7;Q8IZ69;Q8IZ69-2;B4E213 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes no 0 0 0 7 0 1 64.575 64.605 3 2.9056E-10 19938 20230619_1887_Aki_TMTPro18x_K_F7 127.97 87.942 15616 14615 16135 18060 19568 19125 19184 22973 21814 17704 20808 15618 17350 18345 18113 20406 19682 21492 14457 13403 16408 17973 20024 19351 19456 23048 22017 18116 21212 16076 17880 18931 18506 20528 18829 20395 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62624000 28179 2954 26467 52924 42730 42730 1 9606 Homo sapiens 0.09675451229486498 VADWTGATYQDK Unmodified 1353.6201 0.62009493 3242 O15371-2;O15371-3;O15371;B0QYA5;B0QYA6;B0QYA8 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 0 5.5 0.5 1 1 52.612 52.687 2 4.5024E-31 15061 20230619_1886_Aki_TMTPro18x_K_F6 272.03 178.91 98698 66713 81085 96274 87262 112530 107490 108340 117940 121640 123590 125890 140550 113620 108350 148770 134740 136240 91029 61360 84052 94962 90865 112380 107520 111310 119830 122340 127260 127240 141360 119470 112420 148120 128680 129530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88039000 28180 3242 26468 52925;52926 42731;42732 42732 2 9606 Homo sapiens -0.04257030887038127 VADWTGATYQDKR Unmodified 1509.7212 0.72120596 3242 O15371-2;O15371-3;O15371;B0QYA5;B0QYA6;B0QYA8 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 1 8 0 1 46.778 46.827 3 0.0073098 12241 20230619_1888_Aki_TMTPro18x_K_F8 69.314 45.834 51689 50840 55430 53859 51044 56904 54044 53482 62053 58624 62146 49887 55147 50015 57454 57224 60216 45640 47885 46549 55918 54217 53449 57258 54590 55013 62755 58723 63376 51089 56637 51944 58529 56755 57486 43526 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91146000 28181 3242 26469 52927 42733 42733 1 9606 Homo sapiens -0.013265791843423358 VADYCENNYIQSADK Unmodified 1788.7625 0.76247843 993 A0A0C4DG21;F8WAL6;Q9NYB9-2;Q9NYB9;E7EW77;Q9NYB9-4;A0A7D9NKC8;E7EP65;E9PEZ7;Q53RS4;F8WBL5;A0A0A0MQU9;F8WEB9 ABI2;ABI-2 Abl interactor 2 yes no 0 0 0 4 0 1 50.397 50.428 3 0.004936 14193 20230619_1883_Aki_TMTPro18x_K_F4 69.261 57.787 48431 38252 43806 49468 40792 51674 54152 46405 49284 67470 60290 63683 73929 55000 55928 77950 69882 77593 44738 35117 44888 49052 43007 51950 53670 48359 51021 66912 61951 64523 74117 58279 58082 77868 66781 73674 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74741000 28182 993 26470 52928 42734 42734 1 9606 Homo sapiens -0.10035230997800682 VADYIPQLAK Unmodified 1116.6179 0.61791009 3339 O94925-3;B3KM58;A8K132;O94925;Q53TX0;H7BZD1 GLS Glutaminase kidney isoform, mitochondrial yes no 0 0 0 1.5 0.5 1 1 59.829 59.835 3 0.0025848 18365 20230619_1880_Aki_TMTPro18x_K_F1 80.688 64.057 101660 87230 95302 107220 107240 105670 108010 106160 115480 129690 123480 121690 143300 118180 124160 156020 135770 130010 93983 80014 97573 106620 110370 107030 109110 109060 117670 129540 127170 123840 144690 124010 127400 154630 129760 123780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 288240000 28183 3339 26471 52929;52930 42735;42736 42735 2 9606 Homo sapiens 0.06426585165854704 VAEAVATFLIR Unmodified 1188.6867 0.68665836 1224 A0A140VK39;Q9Y570;Q9Y570-4;Q9Y570-2 PPME1 Protein phosphatase methylesterase 1 yes no 0 0 0 3.5 0.5 1 1 64.371 64.391 2 9.8273E-09 20164 20230619_1883_Aki_TMTPro18x_K_F4 183.67 124.89 124380 94979 101370 128630 98186 125380 113450 119330 136500 130720 125630 118270 138150 110060 119660 133110 132140 140630 114790 87250 105020 127030 102880 126830 114240 122640 137340 131140 129890 120380 139680 115090 122770 133770 126370 133460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85346000 28184 1224 26472 52931;52932 42737;42738 42738 2 9606 Homo sapiens 0.09986249465555375 VAEDEAEAAAAAK Unmodified 1244.5885 0.58846046 1704 P08195-4;P08195-5;P08195;P08195-3;A0A7P0Z4P5;A0A7P0TAN7;A0A7P0Z4A0;A0A7P0T9F7;F5GZS6;P08195-2;A0A7P0TBF8;B4E2Z3;A0A7P0TAS6;A0A024R599;A0A7P0T8U7;A0A7P0T8F1;H0YH36;A0A7P0TAT7;F5H0E2;H0YFS2;F5H867;A0A7P0T853;B4E3E4 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 0 1.5 0.5 2 2 47.784 47.819 2;3 1.3638E-07 13468 20230619_1880_Aki_TMTPro18x_K_F1 179.67 127.74 143320 106170 112740 134990 127050 126570 125250 130340 170520 179340 205350 238590 204860 173560 195530 209650 238070 248110 132210 97481 117390 133830 130850 128760 127840 134250 172570 180370 209240 237180 208680 183100 201420 212210 227440 235210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 635350000 28185 1704 26473 52933;52934;52935;52936 42739;42740 42739 2 9606 Homo sapiens -0.024050236409721037 VAEEHAPSIVFIDEIDAIGTK Unmodified 2253.1529 0.15287841 3706 Q53XL8;Q53HB3;P62191;P62191-2 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 4.25 0.829 1 1 2 62.778 62.811 3;4 2.8157E-16 19533 20230619_1883_Aki_TMTPro18x_K_F4 150.29 140.23 51710 44448 45901 50210 43233 56935 57068 53311 61960 55435 59528 50724 56798 45964 61317 57249 52420 63275 47786 40738 47115 50331 45573 56965 56879 54777 62713 55784 61029 51587 58240 48198 61764 57696 50316 59995 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 369610000 28186 3706 26474 52937;52938;52939;52940 42741;42742 42741 2 9606 Homo sapiens 0.07642808813034208 VAEELALEQAK Unmodified 1199.6398 0.63976774 2760 C9JRZ6;A4D1N4;Q9NX63;F8WAR4;A0A286YEX5;B7Z1X9 CHCHD3 MICOS complex subunit MIC19 yes no 0 0 0 2.5 0.5 1 1 54.406 54.441 3 0.00045916 16088 20230619_1882_Aki_TMTPro18x_K_F3 96.113 67.936 68037 52250 70839 67802 64404 80489 64659 57708 93959 80798 77140 76405 84005 69235 75393 97047 79496 81169 62910 47975 71613 67347 67538 79885 66086 61173 93382 80359 80221 77547 85106 73115 77166 96124 76034 77257 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 393550000 28187 2760 26475 52941;52942 42743 42743 1 9606 Homo sapiens 0.047933451237213376 VAEELALEQAKK Unmodified 1327.7347 0.73473076 2760 C9JRZ6;A4D1N4;Q9NX63;F8WAR4;A0A286YEX5;B7Z1X9 CHCHD3 MICOS complex subunit MIC19 yes no 0 0 1 6 0 1 51.641 51.718 3 0.0054282 14641 20230619_1886_Aki_TMTPro18x_K_F6 67.234 48.425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28188 2760 26476 52943 42744 42744 1 9606 Homo sapiens 0.0839727859490722 VAEELILR Unmodified 941.55458 0.55458155 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;H0Y9Y3;Q9UMS6;Q9UMS6-3 SYNPO2 Synaptopodin-2 yes no 0 0 0 4 0 1 54.091 54.107 2 0.0022599 15849 20230619_1883_Aki_TMTPro18x_K_F4 109.01 47.015 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28189 4686 26477 52944 42745 42745 1 9606 Homo sapiens 0.0814664444861819 VAEFHTELER Unmodified 1229.6041 0.60405094 1850 Q5U0B3;R4GMR5;V9HW09;A0A8V8TQ44;P48556;K7EJR3;A0A8V8TPK1;A0A8V8TR48;K7EJC1;K7ERW6 PSMD8;HEL-S-91n 26S proteasome non-ATPase regulatory subunit 8 yes no 0 0 0 3 0.816 1 1 1 42.535 42.598 3 5.5896E-06 11005 20230619_1881_Aki_TMTPro18x_K_F2 159.83 125.11 201980 150580 183330 200390 211980 244180 206550 219530 244590 230380 242910 213860 263830 209410 229370 261960 216780 232700 186520 138310 188320 198790 217950 242960 209810 226190 246990 231810 250010 217900 266820 218980 233340 260690 207640 221280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 640830000 28190 1850 26478 52945;52946;52947 42746 42746 1 9606 Homo sapiens -0.001566923332575243 VAEGQVTCPYLPPFPAR Unmodified 1900.9506 0.95055397 2259 B2R894;Q96DV4;Q96DV4-2 MRPL38 39S ribosomal protein L38, mitochondrial yes no 0 0 0 1.5 0.5 1 1 59.246 59.252 2 0.001216 18215 20230619_1880_Aki_TMTPro18x_K_F1 75.819 63.259 6359.4 4819 6069.3 6836 4755 7625.7 7144.6 5749.4 7355.6 5770.5 7142 6438.8 6828.5 5907.1 6236.2 7836.6 7771.9 7238.7 5875.5 4429.3 6178.3 6743.7 5125.3 7599.9 7069.2 6010.6 7463.1 5856.8 7319.5 6496.1 6953.6 6211 6445.3 7805.7 7417.6 6883.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14198000 28191 2259 26479 52948;52949 42747 42747 1 9606 Homo sapiens 0.03611671717271747 VAEIEHAEK Unmodified 1024.5189 0.51892433 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14;B7Z4R3 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 2 0.816 1 1 1 40.309 40.352 3 0.0003496 9948 20230619_1881_Aki_TMTPro18x_K_F2 117.67 76.225 898580 421980 1044500 1120900 1353300 1406800 1120400 1209700 1231600 1024100 1470100 1510300 1387800 1258800 1268100 621720 1563100 1570300 829800 392710 1053800 1076600 1373900 1395000 1147300 1244500 1257000 1060100 1493700 1501200 1413700 1274000 1304100 690390 1492800 1481400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2069999999.9999998 28192 3756 26480 52950;52951;52952 42748;42749 42748 2 9606 Homo sapiens 0.007645622009249564 VAELLGESDGRR Unmodified 1300.6735 0.67352749 740 A0A024RCZ8;Q9NSK0;Q9NSK0-3;Q9NSK0-5 KLC4 Kinesin light chain 4 yes no 0 0 1 4 0 1 46.447 46.491 3 0.00079856 12401 20230619_1883_Aki_TMTPro18x_K_F4 91.784 60.895 31964 29627 32563 36478 34367 40115 41399 38301 49927 36299 42814 49630 42626 38558 45250 46253 43029 49489 29586 27169 33089 36321 35766 40240 41580 39220 50039 37221 44311 49395 43651 40527 45853 46538 41236 46947 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52465000 28193 740 26481 52953 42750 42750 1 9606 Homo sapiens 0.035217666154949256 VAELLLAK Unmodified 855.54295 0.54295423 4062 Q5T6V5 C9orf64 UPF0553 protein C9orf64 yes yes 0 0 0 1 0 1 61.964 61.964 2 0.0016577 19269 20230619_1880_Aki_TMTPro18x_K_F1 124.08 33.014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28194 4062 26482 52954 42751 42751 1 9606 Homo sapiens 0.1094044742526421 VAELVHILK Unmodified 1020.6332 0.63316622 4597 Q9NUL7 DDX28 Probable ATP-dependent RNA helicase DDX28 yes yes 0 0 0 2 0 1 59.539 59.551 3 0.002481 18431 20230619_1881_Aki_TMTPro18x_K_F2 87.913 51.22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28195 4597 26483 52955 42752 42752 1 9606 Homo sapiens 0.12367496753711293 VAEQTPLSALYLASLIK Unmodified 1816.0346 0.034601177 1437 A0A384MTJ7;P30837 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes no 0 0 0 3.5 0.5 1 1 65.736 65.758 3 4.4279E-09 20696 20230619_1883_Aki_TMTPro18x_K_F4 122.31 107.33 21342 19109 22818 22844 21630 27507 26014 28268 24549 26605 30914 28933 27910 27207 35970 32397 32451 30834 19757 17521 23046 22831 22693 27468 25947 28770 25345 27038 31295 29231 28981 28376 36220 32400 31071 29309 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96942000 28196 1437 26484 52956;52957 42753 42753 1 9606 Homo sapiens 0.15922526085864774 VAEQVLNAVNK Unmodified 1183.6561 0.65608651 4545 Q9HB40;B4DP22;Q9HB40-2 SCPEP1 Retinoid-inducible serine carboxypeptidase yes no 0 0 0 1 0 1 57.215 57.215 3 0.00079569 17360 20230619_1880_Aki_TMTPro18x_K_F1 86.014 63.185 26304 32573 19543 29261 24503 34946 46500 29282 41192 29029 32217 29691 36489 28442 22977 33320 37016 43594 24348 29765 20583 29902 25696 34780 45359 30352 41845 29409 33638 30090 36463 29672 24436 33942 35327 41273 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179630000 28197 4545 26485 52958 42754 42754 1 9606 Homo sapiens 0.07160471080487696 VAETANEEEVK Unmodified 1217.5776 0.57756142 3692 P61221;D6R9I9 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 0 0 1 0 1 41.439 41.439 2 6.8392E-07 10711 20230619_1880_Aki_TMTPro18x_K_F1 152.62 122.81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28198 3692 26486 52959 42755 42755 1 9606 Homo sapiens -0.022524260152522402 VAETAVQLFISGDK Unmodified 1476.7824 0.78240924 2699 B7Z7P8;P62495-2;P62495;I3L492 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 7.5 0.5 1 1 63.964 63.99 3 0.021216 19567 20230619_1888_Aki_TMTPro18x_K_F8 56.527 41.837 14476 12825 13326 14843 13380 18985 16230 14345 18575 18123 11699 21235 21157 15399 13398 23983 21147 19180 13384 11756 13649 14875 14008 18768 16262 15083 18541 18211 12800 21189 20921 16531 14245 23661 20144 18275 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 336070000 28199 2699 26487 52960;52961 42756 42756 1 9606 Homo sapiens 0.06308932795104738 VAEVAPEER Unmodified 998.50327 0.50327426 4111 Q6IQ49-3;Q6IQ49-2;Q6IQ49 SDE2 Protein SDE2 homolog yes no 0 0 0 1 0 1 37.662 37.662 2 0.016394 9079 20230619_1880_Aki_TMTPro18x_K_F1 73.573 49.418 50144 36629 50315 55324 60934 81845 62534 63457 86080 63818 74279 70957 77150 68550 67770 54634 90793 75027 46337 33697 51311 54635 62651 80256 63669 66089 85810 64771 76855 71607 78249 70075 70262 56323 86538 71103 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28243000 28200 4111 26488 52962 42757 42757 1 9606 Homo sapiens 0.0039627568389732915 VAEVEGEQVDNK Unmodified 1315.6256 0.62557424 2831 D3DVQ1;O95202 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes no 0 0 0 1.5 0.5 1 1 44.199 44.24 3 3.7415E-05 11997 20230619_1880_Aki_TMTPro18x_K_F1 119.39 104.51 54553 39480 54579 62090 74742 71799 71853 68287 105350 57727 63975 75324 79036 55771 54830 46833 78745 85763 50408 36339 55784 60934 75934 71781 73585 69744 103640 59536 68284 74926 78995 57811 57450 49408 75160 81020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90488000 28201 2831 26489 52963;52964 42758 42758 1 9606 Homo sapiens -0.019613520951679675 VAEVLEGK Unmodified 843.47018 0.47018322 2406 C9J5N1;B3KSP9;Q9BTE6;Q9BTE6-2;Q9BTE6-3 PTGES3L-AARSD1;AARSD1 Alanyl-tRNA editing protein Aarsd1 yes no 0 0 0 5 0 1 52.418 52.491 3 0.013707 14823 20230619_1885_Aki_TMTPro18x_K_F5 72.485 39.644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28202 2406 26490 52965 42759 42759 1 9606 Homo sapiens 0.042186936318557855 VAEVLNDPENMEK Unmodified 1486.6974 0.69735898 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;H0YJT3;H0YJU9;H0YJL0;H0YG16;H0YGB8 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 0 3 0 1 54.847 54.893 3 3.0115E-08 16282 20230619_1882_Aki_TMTPro18x_K_F3 162.48 144.39 106390 91387 101100 116960 92096 115240 110500 112370 126720 134180 126250 124560 144130 110390 119330 152870 137980 138440 98366 83861 103120 115970 97000 116570 110880 115590 128240 134130 130310 126450 145290 116630 123000 152020 131840 131640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32456000 28203 3808 26491 52966 42760 42760 1 9606 Homo sapiens -0.026521807330027514 VAFDPEQK Unmodified 932.46035 0.46034682 3896 Q14684;Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 0 4.5 0.5 1 1 48.554 48.611 2 0.0068057 13345 20230619_1883_Aki_TMTPro18x_K_F4 122.18 83.384 127930 82076 93435 118860 93488 121970 104870 103240 136350 181320 194150 250300 250240 205990 132420 264510 295150 294270 117870 75512 97951 116960 97706 122610 106090 108920 139650 181100 199130 249350 248130 217060 146430 266100 280820 279190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83399000 28204 3896 26492 52967;52968 42761 42761 1 9606 Homo sapiens -0.008584943735286288 VAFERGEEPGK Unmodified 1217.6041 0.60405094 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 1 3.5 0.5 1 1 40.594 40.645 3 0.001862 9800 20230619_1883_Aki_TMTPro18x_K_F4 87.216 63.412 519230 485790 524000 495210 737170 578000 565540 645090 615640 548780 656430 552420 630220 495780 575770 609240 703190 549580 480590 444720 534560 500930 742360 580590 582080 651430 625950 559810 669700 559380 641270 519380 593590 607040 670510 523180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 527500000 28205 3811 26493 52969;52970 42762 42762 1 9606 Homo sapiens 0.003953076667357891 VAFITGGGTGLGK Unmodified 1176.6503 0.65027285 569 A0A024R9D7;Q16698-2;Q16698;E5RJG7;Q7LDK6;E5RFV2;E5RJD2;E5RID6 DECR1;DECR 2,4-dienoyl-CoA reductase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 57.364 57.383 2 1.0296E-20 17228 20230619_1883_Aki_TMTPro18x_K_F4 220.94 142.29 187270 165180 179540 201270 201310 227750 251200 241230 259900 218760 221440 210760 236030 196050 207300 249620 229780 249840 173190 151490 183550 200660 208720 228580 250560 244900 262630 222100 229580 213970 239060 205600 212790 249860 219780 237220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122430000 28206 569 26494 52971;52972 42763;42764 42764 2 9606 Homo sapiens 0.06901372568859188 VAFSVAR Unmodified 748.42317 0.42317345 3567;2399 B3KS36;P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;Q49AJ9;B5MCW2;H7C422 RPL3;rpl3 60S ribosomal protein L3 no no 0 0 0 2 0.816 1 1 1 44.023 44.074 2 0.006075 11680 20230619_1881_Aki_TMTPro18x_K_F2 135.87 48.999 1514600 1297700 1248900 1148300 1901900 2395400 1549400 1664600 2631100 257200 283540 381490 314050 300680 630880 236890 401580 323840 1398900 1187000 1300300 1189000 1919800 2310300 1614000 1712300 2518000 344580 403820 379650 335930 309310 621040 245290 385900 306950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1033799999.9999999 28207 2399;3567 26495 52973;52974;52975 42765;42766 42765 2 9606 Homo sapiens 0.038898788713822796 VAFTGSTEVGHLIQK Unmodified 1585.8464 0.84640648 1437 A0A384MTJ7;P30837 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes no 0 0 0 2 0 1 53.826 53.855 3 3.3053E-20 16110 20230619_1881_Aki_TMTPro18x_K_F2 196.58 168.28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28208 1437 26496 52976 42767 42767 1 9606 Homo sapiens 0.07691712952100715 VAGAATPK Unmodified 713.40719 0.40718903 3462 P16402 HIST1H1D Histone H1.3 yes yes 0 0 0 7.5 0.5 1 1 37.376 37.362 2 0.00062583 8232 20230619_1887_Aki_TMTPro18x_K_F7 126.67 76.628 52750 23806 67819 68844 101690 87611 73948 119700 78652 44110 92104 126660 70628 103610 87119 33802 138370 128730 48756 22203 68118 66023 101960 87837 76454 117920 80221 51105 93196 123900 73901 103830 90811 40594 131830 121300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41848000 28209 3462 26497 52977;52978 42768;42769 42768 2 9606 Homo sapiens 0.039021726344572016 VAGDCLDEK Unmodified 1005.4437 0.44371047 4323 Q96AG4 LRRC59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 2 0.816 1 1 1 43.742 43.793 2 0.00022501 11561 20230619_1881_Aki_TMTPro18x_K_F2 167.04 115.04 417560 212870 477310 519650 603150 725400 589180 659590 682280 481960 621020 672950 742800 582490 500100 391820 823900 747200 385650 197670 482180 501580 616540 715490 597840 673360 686710 502740 645430 670990 742660 594470 529940 417110 784640 706210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 578280000 28210 4323 26498 52979;52980;52981 42770;42771 42770 2 9606 Homo sapiens -0.05879363321787423 VAGHPLAQNER Unmodified 1190.6156 0.61561868 3277 O60493;O60493-2;O60493-4 SNX3 Sorting nexin-3 yes no 0 0 0 6 1.41 1 1 1 1 1 29.467 29.528 3 8.2609E-13 5572 20230619_1885_Aki_TMTPro18x_K_F5 193.83 175.09 54649 37961 56802 53475 69771 68519 63843 69507 84816 67303 73215 63816 69059 54707 61004 60762 74199 60948 50501 34902 57686 52930 71247 68170 65371 70838 84708 68060 75402 64656 70219 57077 62895 60984 70774 57936 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 340590000 28211 3277 26499 52982;52983;52984;52985;52986 42772;42773;42774 42773 3 9606 Homo sapiens 0.027935494807252326 VAGHPNIVINNAAGNFISPTER Unmodified 2290.1818 0.18182755 569 A0A024R9D7;Q16698-2;Q16698;E5RJG7;Q7LDK6;E5RFV2;E5RJD2 DECR1;DECR 2,4-dienoyl-CoA reductase, mitochondrial yes no 0 0 0 1.67 0.471 1 2 51.825 51.851 3 7.0518E-46 15191 20230619_1881_Aki_TMTPro18x_K_F2 251.41 236.71 162000 129110 133850 172410 171400 195630 187740 192730 187630 178480 168030 188700 185650 174000 179530 205360 191180 211710 149560 118570 139140 170790 175580 195930 188300 196700 190440 181450 174290 190590 188760 181560 183460 206150 182950 200940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 446470000 28212 569 26500 52987;52988;52989 42775;42776 42776 2 9606 Homo sapiens 0.08834390952733884 VAGHSLGYGFVNYVTAK Unmodified 1781.9101 0.91006937 3938 Q15717;Q15717-2;M0QZR9 ELAVL1 ELAV-like protein 1 yes no 0 0 0 5 0 1 56.542 56.604 3 0.0003407 16503 20230619_1885_Aki_TMTPro18x_K_F5 75.998 49.851 90103 88831 90768 91795 75139 86353 97821 99368 93657 91501 89446 88626 100740 69075 94780 106950 95783 97461 83427 81316 91930 92466 79881 88068 97225 100410 95495 92766 92483 89493 102060 73968 96607 106300 91646 92663 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268530000 28213 3938 26501 52990 42777 42777 1 9606 Homo sapiens 0.05039073389184523 VAGIESHSELQISR Unmodified 1524.7896 0.78961988 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 4.5 0.5 1 1 43.459 43.521 3 3.439E-70 11065 20230619_1883_Aki_TMTPro18x_K_F4 289.72 258.72 161020 139450 155040 170900 172240 189730 179490 176330 189200 185490 187960 194530 208080 177970 183330 185410 202150 201790 148890 127900 158350 170240 177740 190130 180870 181330 192210 187260 193840 196460 210560 184550 187900 187140 193240 191490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 950600000 28214 349;3906 26502 52991;52992 42778;42779 42778 2 9606 Homo sapiens 0.048216653955705624 VAGINACGR Unmodified 916.45488 0.45488428 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4;H7C1C4 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 8 0 1 37.251 37.236 2 0.00060048 8355 20230619_1888_Aki_TMTPro18x_K_F8 130.04 86.916 82564 48463 80926 80288 106200 109460 95711 103800 109020 72673 89739 92345 94966 75518 90233 54649 108740 88396 76198 44683 82710 78812 107980 108300 97531 105560 109430 75763 93238 92237 96518 77418 92642 57270 103720 83676 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61340000 28215 1331 26503 52993 42780 42780 1 9606 Homo sapiens -0.0066849643698105865 VAGQDGSVVQFK Unmodified 1233.6354 0.63535107 536 A0A024R8S3;P61956-2;P61956;A8MUA9;A8MU27;P55854;P55854-2;Q6EEV6 SUMO2;SUMO3;SUMO4 Small ubiquitin-related modifier;Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 3;Small ubiquitin-related modifier 4 yes no 0 0 0 6.14 2.23 1 2 2 2 50.369 50.436 2;3 2.5184E-09 13736 20230619_1887_Aki_TMTPro18x_K_F7 209.85 179.68 834500 683240 762620 838660 950460 979050 973840 892800 980440 953380 1010400 957280 1036200 833320 997830 1077600 1003800 961420 771090 626820 783950 835960 972420 977610 980540 919850 999810 960460 1036200 967900 1054500 876640 1016100 1072300 960080 914540 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 14078000000 28216 536 26504 52994;52995;52996;52997;52998;52999;53000 42781;42782;42783;42784 42783 4 9606 Homo sapiens 0.027878807008619333 VAGTQACATETIDTSR Unmodified 1679.7785 0.77846285 2454 B4DDP8;B4DG35;Q9BRR6-2;Q9BRR6;Q69YR1;Q9BRR6-4;Q9BRR6-3 ADPGK;DKFZp667C1917 ADP-dependent glucokinase yes no 0 0 0 3 0 1 41.155 41.214 3 4.3068E-08 10135 20230619_1882_Aki_TMTPro18x_K_F3 126.63 94.802 21962 20833 29859 29555 40660 35547 32399 31872 39269 26915 34028 34802 32719 30460 41286 33570 39353 38397 20389 19133 29823 29201 41071 35423 33359 32688 39372 27734 35128 34839 33862 31717 41681 33982 37664 36422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47042000 28217 2454 26505 53001 42785 42785 1 9606 Homo sapiens -0.03423524760910368 VAGVVAPTLPREDLEK Unmodified 1692.941 0.94103514 635 A0A024RAV2;P46063 RECQL ATP-dependent DNA helicase Q1 yes no 0 0 1 6.5 0.5 1 1 52.906 52.98 3 1.5753E-05 15158 20230619_1886_Aki_TMTPro18x_K_F6 100.04 66.838 181360 146020 168720 204220 177510 211080 201720 221740 239090 247850 226790 223190 256410 205450 236940 266730 253930 215530 167590 134160 172820 201480 184530 213080 203190 226410 241120 248300 234550 227140 259760 215750 242370 264130 242530 205400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 189360000 28218 635 26506 53002;53003 42786;42787 42786 2 9606 Homo sapiens 0.12228226703405198 VAGYAALLEQYQK Unmodified 1452.7613 0.76127986 109 A0A024R0R9;P54920;M0R0Y2;M0R2M1;M0R058;M0R027;A0A024R0V6 NAPA Alpha-soluble NSF attachment protein yes no 0 0 0 2 0 1 62.237 62.247 3 1.3606E-05 19596 20230619_1881_Aki_TMTPro18x_K_F2 119.76 103.13 267760 232630 277060 355330 250900 321110 300580 322240 347380 360440 310070 330520 343100 289430 335450 378840 369310 378460 247760 213900 280810 348060 264370 327090 301740 330180 349990 361260 321540 335430 348810 304700 343350 379110 353090 359430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 170770000 28219 109 26507 53004 42788;42789 42788 2 9606 Homo sapiens 0.05300967486255104 VAHALAEGLGVIACIGEK Unmodified 1806.9662 0.96620404 3674 V9HWK1;P60174;P60174-3;B4DUI5;Q53HE2;P60174-4;U3KPZ0;U3KQF3 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 2 0 1 63.441 63.45 3 7.942499999999999E-19 20168 20230619_1881_Aki_TMTPro18x_K_F2 182.18 164.48 91261 46673 76105 82716 71149 76393 83015 73843 90205 94846 98642 96132 106450 83702 90821 120110 94962 103210 84073 43106 78530 80434 74636 77632 83242 76228 91857 94765 101130 97168 107600 88680 93026 119080 90876 98179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 419490000 28220 3674 26508 53005 42790 42790 1 9606 Homo sapiens 0.09499958234368933 VAHEPVAPPEDK Unmodified 1287.6459 0.64591575 2348 B3KM95;B3KNK4;O95674 CDS2 Phosphatidate cytidylyltransferase;Phosphatidate cytidylyltransferase 2 yes no 0 0 0 3 0 1 38.49 38.543 3 0.014061 9025 20230619_1882_Aki_TMTPro18x_K_F3 64.121 43.168 16698 11389 11703 18020 19633 21569 20533 24451 31670 21391 26023 30433 25061 23445 23574 28128 31888 29620 15386 10486 12465 17684 19822 21594 20983 24685 31366 22070 26948 30245 25566 24645 24481 28262 30414 28126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32096000 28221 2348 26509 53006 42791 42791 1 9606 Homo sapiens 0.013598633552646788 VAHFLEK Unmodified 842.46504 0.46503826 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258 COPB2 Coatomer subunit beta' yes no 0 0 0 4.5 3.5 1 1 46.449 46.468 3 0.0020058 12050 20230619_1888_Aki_TMTPro18x_K_F8 127.84 70.741 383000 152070 330720 370540 425670 432840 434090 408380 515700 379470 389860 345980 417380 306810 374240 457750 418970 348560 352610 141440 341960 356600 434780 432050 439470 418150 515400 384330 406820 351860 422840 325840 384220 451230 399950 332480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 384280000 28222 3031 26510 53007;53008 42792;42793 42793 2 9606 Homo sapiens 0.03750434559901805 VAHLALK Unmodified 750.47521 0.47520902 3655 P55036;Q5VWC4;P55036-2;A6PVX3 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes no 0 0 0 2.5 0.5 1 1 42.941 43.015 3 0.0053155 10926 20230619_1882_Aki_TMTPro18x_K_F3 106.76 3.049 477350 269630 401620 465800 595440 569370 539990 545920 752230 265820 305780 244780 269140 223390 359110 266590 309350 197900 439960 248790 417500 455270 601530 567170 553720 551810 734910 283990 332890 249240 280280 233350 360280 263720 295690 189100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 332480000 28223 3655 26511 53009;53010 42794;42795 42795 2 9606 Homo sapiens 0.08999042285142878 VAHMEFCYQELCQLAAER Oxidation (M) 2269.9918 0.99184321 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 1 0 5.5 0.5 1 1 55.462 55.532 3 3.143E-10 16088 20230619_1885_Aki_TMTPro18x_K_F5 141.6 134.24 62836 45820 55154 57543 82143 64208 68496 64167 74701 77203 69133 73925 80456 76601 68707 88052 78352 86552 58005 42066 57051 57243 82630 64497 70028 65906 75617 77237 71722 75281 81263 79502 70715 88163 74930 82193 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 101440000 28224 2337;3778;3779 26512 53011;53012 42796;42797 42796 1456 2 9606 Homo sapiens -0.09235303367813685 VAHMEFCYQELCQLAAER Unmodified 2253.9969 0.99692859 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 7 0 1 60.561 60.604 3 1.1599000000000001E-30 18099 20230619_1887_Aki_TMTPro18x_K_F7 235.24 228.73 29436 22390 30199 30023 27398 26897 29530 32744 32480 31335 29581 27729 32105 29003 32414 31508 29903 31601 27212 20566 30564 29660 28708 27575 29763 33002 32817 31630 30594 28366 32709 30006 32812 31635 28647 30008 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38889000 28225 2337;3778;3779 26512 53013 42798 42798 1 9606 Homo sapiens -0.07990999505227592 VAHMETSLGQAR Oxidation (M) 1314.635 0.63503349 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 1 0 5.25 0.829 1 1 2 31.533 31.586 3 8.4508E-06 5964 20230619_1885_Aki_TMTPro18x_K_F5 134.2 108.76 71167 36700 66073 68066 113990 106350 98909 108890 135930 87710 116820 127550 108690 90920 97955 96988 118660 119790 65615 33916 68266 66621 114130 104670 101700 110430 135440 91048 120440 126410 110690 95321 100930 98655 113340 113530 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 134150000 28226 2830 26513 53014;53015;53016;53017 42799;42800;42801;42802;42803 42800 1692 5 9606 Homo sapiens -0.009698622906398668 VAHMETSLGQAR Unmodified 1298.6401 0.64011887 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 6.5 0.5 1 1 37.695 37.765 3 9.6706E-10 8376 20230619_1887_Aki_TMTPro18x_K_F7 174.77 149.11 135570 91399 132720 139500 140690 168480 167800 161190 199110 185350 180570 190020 218440 169690 154960 194330 231250 213910 125200 84123 135260 137250 146370 167900 168540 165810 200360 186220 187790 191960 218700 177130 163100 195870 220400 203030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 211950000 28227 2830 26513 53018;53019 42804;42805 42805 2 9606 Homo sapiens 0.0027444157196896413 VAHSDKPGSTSTASFR Unmodified 1646.8012 0.8012472 2148 A8KA83;Q9P0L0;Q9P0L0-2 VAPA Vesicle-associated membrane protein-associated protein A yes no 0 0 1 4.5 3.5 1 1 34.275 34.271 4 6.6617E-15 7230 20230619_1888_Aki_TMTPro18x_K_F8 191.44 173.28 60714 33307 63143 79102 77978 75328 81692 77339 76292 72185 78951 89497 78479 63446 69832 83256 90447 98058 56044 30898 64257 75965 79793 76447 81977 78779 78134 73728 80935 89167 79700 67379 72376 84125 86392 92951 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 152530000 28228 2148 26514 53020;53021 42806;42807 42807 2 9606 Homo sapiens 0.003718624188877584 VAHSFNCTPIEGMLSHQLK Oxidation (M) 2184.0456 0.045593344 654 A0A024RB85;Q9UQ80;A8K6Y1;Q6PIN5;Q05D08;Q9UQ80-2;F8VR77;F8W0A3 PA2G4 Proliferation-associated protein 2G4 yes no 0 1 0 1 0 1 47.662 47.662 4 3.9938E-10 13394 20230619_1880_Aki_TMTPro18x_K_F1 132.4 121.55 64545 38228 62954 66680 65947 67239 84111 78144 89352 80969 77692 78343 90346 69802 72148 89495 72252 90799 59568 35269 64160 64982 68694 68169 83882 79164 90262 81600 80811 79378 90889 73369 73795 89635 69257 86160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 298070000 28229 654 26515 53022 42808 42808 401 1 9606 Homo sapiens 0.0009323712615696422 VAHTCLHPQESLPDTR Unmodified 1859.8948 0.89483001 2047 A8K4M5;O60563;A0A1W2PQ16;O60563-2 CCNT1 Cyclin-T1 yes no 0 0 0 5 0 1 36.221 36.312 4 2.3994E-42 8021 20230619_1885_Aki_TMTPro18x_K_F5 230.97 220.83 21285 10324 19409 23999 35515 33493 26321 35135 33352 24519 29099 29572 29515 26267 27062 23483 40324 29076 19617 9580.8 20135 23207 35339 33165 27299 35460 33392 25509 30075 29680 30019 27057 28266 23973 38375 27599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31874000 28230 2047 26516 53023 42809 42809 1 9606 Homo sapiens -0.0007216147032522713 VAIAALEVLEEENLAENADK Unmodified 2140.0899 0.089943804 1194 A0A140VJQ4;P04181;P04181-2;Q59HE2 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes no 0 0 0 3.5 0.5 1 1 65.658 65.681 4 0.052003 20683 20230619_1883_Aki_TMTPro18x_K_F4 44.577 33.943 4042.8 4591.1 4033.8 4429.8 6372 4239.9 4339.2 6027 4949.4 4604 5228.7 5233.4 5545.2 4554.3 7701.7 6439.5 5728.6 8067.3 3747.2 4198.6 4131.5 4489.6 6357.7 4352.9 4517 5990.2 5021.4 4745 5370.9 5267.1 5748.9 4823.6 7678.7 6534.3 5516.3 7636.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7236500 28231 1194 26517 53024;53025 42810 42810 1 9606 Homo sapiens 0.0655024302500351 VAIDVGYR Unmodified 891.48142 0.48141661 435 A0A024R7A8;P15121;Q59EL5;E9PCX2;E9PEF9 AKR1B1 Aldose reductase yes no 0 0 0 6 0.816 1 1 1 47.207 47.288 2 0.0058911 12313 20230619_1887_Aki_TMTPro18x_K_F7 112.17 68.957 1389400 1213200 1310700 1341200 1427500 1644500 1416400 1450600 1830200 1676500 1686800 1826600 1812100 1523600 1507100 1781900 1935300 1801700 1284700 1111600 1340000 1348300 1474600 1635700 1441800 1501200 1835500 1687300 1743400 1836600 1831300 1595300 1563000 1786900 1846600 1711500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2130899999.9999998 28232 435 26518 53026;53027;53028 42811;42812 42812 2 9606 Homo sapiens 0.03133515726005953 VAIEHLDK Unmodified 923.50763 0.50763136 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 4.5 1.12 1 1 1 1 43.253 43.325 3 0.00064094 10955 20230619_1883_Aki_TMTPro18x_K_F4 129.42 56.874 1500100 1155300 1238200 1377500 1598500 1582400 1524900 1494400 1898600 1691600 1853200 1807000 1967900 1592100 1632300 2048200 2023000 1790800 1384600 1059900 1285600 1375600 1629700 1583300 1553000 1538100 1911000 1703100 1907800 1822800 1988700 1673300 1689500 2035400 1930200 1704500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3137699999.9999995 28233 2633 26519 53029;53030;53031;53032 42813;42814 42813 2 9606 Homo sapiens 0.04281784897477792 VAIEPGAPR Unmodified 908.50797 0.50796571 3775 V9HW89;Q00796;A0A6I8PIS1;B4DKI2 HEL-S-95n;SORD Sorbitol dehydrogenase yes no 0 0 0 4.5 0.5 1 1 40.247 40.313 2 0.013135 9711 20230619_1883_Aki_TMTPro18x_K_F4 79.474 64.956 141250 96120 134240 138460 188180 179470 170750 176910 188350 140560 192150 206900 180630 157180 178120 146040 227410 185920 130420 88403 137760 136850 190520 178320 173720 179920 190840 146060 196580 205290 184670 163170 183680 149310 216820 176310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 799930000 28234 3775 26520 53033;53034 42815 42815 1 9606 Homo sapiens 0.05005204617327763 VAIHEAMEQQTISIAK Oxidation (M) 1783.9138 0.91383411 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 1 0 6 0 1 47.22 47.301 3 0.0022298 12718 20230619_1886_Aki_TMTPro18x_K_F6 70.529 60.57 72900 58354 66988 73245 68181 65836 71287 71941 83502 91660 103550 83414 104560 89047 76049 107100 98837 99159 67355 53552 68579 72658 70762 67312 72110 73607 85201 91327 105160 85352 105330 92624 79265 106800 94348 94265 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131300000 28235 2188 26521 53035 42816 42816 1369 1 9606 Homo sapiens 0.05323375100715566 VAIHEAMEQQTISIAK Unmodified 1767.9189 0.91891949 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 7 0 1 51.436 51.514 3 1.5735E-08 14244 20230619_1887_Aki_TMTPro18x_K_F7 138.73 109.39 285980 200390 291160 286120 233220 315100 276130 308610 352120 383670 352240 392940 440690 365920 320930 427480 401400 450080 264240 184260 294480 282260 248550 316060 278490 317610 354750 383980 365410 397420 441270 381700 333490 429530 383610 427070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 839030000 28236 2188 26521 53036 42817 42817 1 9606 Homo sapiens 0.06567678963347134 VAIHYINPPNPAK Unmodified 1432.7827 0.78268401 3757 P78406;Q5J8M4;E9PQ57 RAE1 mRNA export factor yes no 0 0 0 3 0 2 47.643 47.722 3;4 0.00086419 12989 20230619_1882_Aki_TMTPro18x_K_F3 87.184 71.294 111020 93038 112900 115550 123900 130940 124550 115900 149420 134100 141960 154970 156100 140470 129540 137020 365090 173240 102680 85358 114710 115050 127820 130920 126310 119970 150510 135250 146690 155800 157990 145210 145120 139760 345710 164860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 357770000 28237 3757 26522 53037;53038 42818;42819 42818 2 9606 Homo sapiens 0.08360397305659717 VAILVDDMADTCGTICHAADK Unmodified 2275.0283 0.0282883 3683;2257 Q53FW2;P60891;B1ALA9;A0A2R8Y7H4;P60891-2;B7ZB02;A0A6Q8PEU0;A0A6Q8PG82;B2R860;P11908;A0A140VK41;P11908-2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 0 0 5 0 1 61.705 61.754 3 0.010402 18708 20230619_1885_Aki_TMTPro18x_K_F5 54.225 47.113 51938 45496 58834 61219 46680 59883 56574 53848 65064 69115 61968 66893 73208 63417 65576 69926 73540 76307 48099 41769 59031 60503 49769 60493 56753 55860 65729 68972 64255 67857 74012 65888 67279 70513 70305 72399 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164250000 28238 3683;2257 26523 53039 42820 42820 1 9606 Homo sapiens -0.058224712618084595 VAIPASVLPGPEEPGGQR Unmodified 1772.9421 0.94209778 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 6 0 1 56.645 56.717 2 4.6822E-09 16755 20230619_1886_Aki_TMTPro18x_K_F6 172.76 133.73 11174 10668 13353 11405 12119 14459 17612 17660 18154 19746 18071 18201 22571 14807 16747 23482 19848 21843 10360 9769.5 13360 11512 12830 14463 17455 17865 18473 19787 18739 18440 22589 15865 17341 23343 18974 20757 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122980000 28239 2830 26524 53040 42821 42821 1 9606 Homo sapiens 0.08654441072303598 VAISNPPQR Unmodified 980.54033 0.54032847 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DYA2;H0YHU8 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 0 5.33 3.09 1 1 1 36.783 36.801 2 0.00015746 8183 20230619_1888_Aki_TMTPro18x_K_F8 173.28 144.37 145430 93605 136820 136580 173390 179260 153750 142020 177090 157750 201400 205640 186130 163720 188640 132980 208210 185000 134230 86125 140220 134900 176630 177160 156890 148120 179970 160100 204870 205040 190590 168650 192530 137250 198860 175250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 168550000 28240 1555 26525 53041;53042;53043 42822;42823;42824 42824 3 9606 Homo sapiens 0.04927992020327565 VAKPVVEMDGDEMTR Oxidation (M) 1691.7859 0.78585641 3600 Q53GL5;P48735;H0YL11 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 1 1 3.5 0.5 1 1 43.319 43.376 3 0.086203 11095 20230619_1882_Aki_TMTPro18x_K_F3 43.883 38.992 194280 148910 192200 221840 237150 265130 257810 251830 286020 287240 301320 281320 288190 244920 292150 284470 280420 244970 179560 136940 196320 218490 243350 264400 259570 259100 290420 288220 307770 284660 294680 255880 296300 283100 268170 233220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 141330000 28241 3600 26526 53044;53045 42825 42825 2266;2267 1 9606 Homo sapiens -0.032365084848606784 VAKPVVEMDGDEMTR Unmodified 1675.7909 0.79094179 3600 Q53GL5;P48735;H0YL11 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 0 1 4.5 0.5 1 1 48.029 48.087 3 1.9415E-07 12940 20230619_1885_Aki_TMTPro18x_K_F5 123.72 110.55 81103 53341 78527 83942 80319 112860 91105 86527 98372 110060 114020 111410 111100 91425 119620 98990 101980 88250 74882 49119 80080 82567 83771 111220 91471 90842 100480 110010 116130 112320 113820 95360 120390 98848 97646 83985 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 632370000 28242 3600 26526 53046;53047 42826 42826 1 9606 Homo sapiens -0.0199220462222911 VALAEACR Unmodified 888.44874 0.44873627 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1;A0A494C0X4;A0A494C1S4;A0A494C159 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 4.5 0.5 1 1 39.81 39.877 2 0.0015417 9466 20230619_1885_Aki_TMTPro18x_K_F5 140.98 109.05 198590 160230 208260 190970 240450 226680 238800 216900 291000 138540 148290 108230 113230 103190 168680 131980 149720 87763 183690 146970 211090 190890 246890 226390 242340 220210 287300 143610 157170 111310 119430 108050 169280 129840 143000 84054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154230000 28243 1552 26527 53048;53049 42827 42827 1 9606 Homo sapiens 4.985331497664447E-05 VALAGLLGFGLGK Unmodified 1214.7387 0.73869393 4015 Q56VL3 OCIAD2 OCIA domain-containing protein 2 yes yes 0 0 0 7 0 1 65.409 65.436 3 0.00088702 20268 20230619_1887_Aki_TMTPro18x_K_F7 96.113 69.151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28244 4015 26528 53050 42828 42828 1 9606 Homo sapiens 0.13991412879317977 VALEIFQHSK Unmodified 1170.6397 0.63970816 4631 Q9NYK5-2;Q9NYK5;C9JG87 MRPL39 39S ribosomal protein L39, mitochondrial yes no 0 0 0 2 0 1 54.487 54.511 3 8.1023E-05 16429 20230619_1881_Aki_TMTPro18x_K_F2 133.42 98.887 83430 68474 90492 92053 92491 122410 113300 95479 106840 147140 165430 179590 150960 127860 161740 151270 149820 208450 77201 62879 91422 91387 96565 120800 112840 100830 111650 146840 166480 178970 154980 134910 163590 154850 143870 197160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231640000 28245 4631 26529 53051 42829 42829 1 9606 Homo sapiens 0.061213899144149764 VALELHK Unmodified 808.48069 0.48068833 2770 CON__ENSEMBL:ENSBTAP00000034412 yes yes 0 0 0 7.5 0.5 1 1 45.325 45.382 3 0.011112 11491 20230619_1887_Aki_TMTPro18x_K_F7 91.041 9.4066 + 68285 57944 72640 81020 111600 112280 98508 101300 170780 69255 96939 90410 67046 87959 143470 82976 134510 125310 63189 53226 74061 80296 112520 110910 102210 103370 166540 72596 101700 90816 73277 90467 143710 86020 128720 118600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167550000 28246 2770 26530 53052;53053 42830 42830 1 0.06878721076952843 VALENDDRSEEEK Unmodified 1532.6954 0.69544472 2986 F8W0B5;A0A2R8Y7P6;V9GY86;Q2M2R5;F8WB06;F8VQP2;A0A2R8Y5A6;A0A2R8YDM9;Q99700;A0A2R8Y7E6;H0YH87;A0A5F9ZHX3;A0A5F9ZHW5;Q99700-5;Q99700-2;Q99700-4;A0A5F9ZI57;A0A5F9ZHH4;B3KT59;A0A5F9ZH85;F8VRK6 ATXN2 Ataxin-2 yes no 0 0 1 1 0 1 39.213 39.213 3 0.00012759 9717 20230619_1880_Aki_TMTPro18x_K_F1 102.63 92.349 148110 112430 142100 145880 152710 166910 160140 165650 203520 180370 194300 189430 190070 179710 166610 196170 225040 198850 136840 103230 145030 144860 158040 167150 162400 169680 204450 181840 199530 191600 193200 186480 173210 196950 214570 188930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99143000 28247 2986 26531 53054 42831 42831 1 9606 Homo sapiens -0.04959518217219738 VALGHGLK Unmodified 793.48102 0.48102268 315 A0A024R4Z6;Q08945;Q59GH7 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 2 0.816 1 1 1 41.398 41.443 3 0.0012451 10452 20230619_1881_Aki_TMTPro18x_K_F2 116.54 57.561 845380 645020 723320 803040 920470 997080 959010 918070 1173800 914010 1009800 998030 1037100 913110 937550 1095400 1157100 986590 780440 592000 748440 800440 941960 991700 970920 943270 1176300 927180 1044800 1006900 1053400 953940 968040 1091400 1103800 938850 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 515520000 28248 315 26532 53055;53056;53057 42832;42833;42834 42832 3 9606 Homo sapiens 0.07602140796802814 VALILQNVDLPN Unmodified 1307.7449 0.74490152 3792 Q04446;B4DNJ3;E9PGM4;B4DUF1;Q59ET0 GBE1 1,4-alpha-glucan-branching enzyme yes no 0 0 0 7.5 0.5 1 1 65.669 65.692 2 0.0003209 20220 20230619_1888_Aki_TMTPro18x_K_F8 126.01 118.2 9258.2 7421.1 8195.3 11198 10464 13367 14353 11905 15440 10398 11197 12454 9852.2 10730 10172 14545 10730 14897 8551.5 6824.4 8473 11016 10808 13308 14263 12231 15477 10663 11640 12498 10133 11315 10396 14560 10290 14130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66934000 28249 3792 26533 53058;53059 42835 42835 1 9606 Homo sapiens 0.10333886320199781 VALLCGPPGLGK Unmodified 1180.6638 0.66381443 1019 E7EXA6;Q96S08;A0A0D9SF58;Q8WVB6;Q8WVB6-2;F8WCC1 CHTF18;RUVBL Chromosome transmission fidelity protein 18 homolog yes no 0 0 0 4 0 1 59.663 59.665 3 0.012194 18219 20230619_1883_Aki_TMTPro18x_K_F4 65.5 53.275 22040 19589 21639 23301 22002 22629 26094 19361 28555 20242 17588 17537 22721 18005 23736 24425 24626 20378 20388 17961 22031 23218 22921 22869 26125 20057 28499 20355 18798 17953 23075 18900 24169 24214 23524 19413 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19027000 28250 1019 26534 53060 42836 42836 1 9606 Homo sapiens 0.08070907076466938 VALLDVFR Unmodified 931.5491 0.54910224 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 3 0 1 63.031 63.061 2 0.0047259 19685 20230619_1882_Aki_TMTPro18x_K_F3 104.37 69.266 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28251 1104 26535 53061 42837 42837 1 9606 Homo sapiens 0.08058965656812234 VALNTLAR Unmodified 856.51305 0.51305109 3925 V9HWJ5;Q15274 HEL-S-90n;QPRT Nicotinate-nucleotide pyrophosphorylase [carboxylating] yes no 0 0 0 2.5 0.5 1 1 45.2 45.279 2 0.063629 12249 20230619_1881_Aki_TMTPro18x_K_F2 69.105 27.265 183960 133340 175450 196070 179110 191790 203030 215070 268660 228770 280060 287250 264220 235560 250080 257590 327230 303580 169910 122630 179110 192750 186470 194740 205390 218480 270200 232280 286130 287200 269650 245840 258830 261070 312180 287940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145430000 28252 3925 26536 53062;53063 42838 42838 1 9606 Homo sapiens 0.07905508479939272 VALQAQIENHK Unmodified 1249.6779 0.67788459 4288 Q8WXH0-2;Q8WXH0;D4YW74;G3V5X4;A0A0C4DGK3;Q8WXH0-7;A0A669KBH2 SYNE2;TROPH Nesprin-2 yes no 0 0 0 7.5 0.5 1 1 43.816 43.867 3 2.6537E-05 10858 20230619_1887_Aki_TMTPro18x_K_F7 138.45 111.66 79925 62037 84232 83315 99086 101530 106300 101430 123600 103580 125060 121090 119500 104090 109850 98407 135410 129180 73914 56980 85430 82632 101870 101290 107270 103690 124900 105140 127960 121540 121710 107660 113210 100750 129270 122390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51384000 28253 4288 26537 53064;53065 42839 42839 1 9606 Homo sapiens 0.06303275829077393 VALSEPQPER Unmodified 1124.5826 0.58258722 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1;H7C1K0 SRRT Serrate RNA effector molecule homolog yes no 0 0 0 2.5 0.5 1 1 40.718 40.784 2 1.4055E-06 9917 20230619_1882_Aki_TMTPro18x_K_F3 173.75 139.58 98446 79046 86854 110240 113260 136600 114040 109760 146040 125270 142070 148940 147740 126700 116870 154170 161010 148570 90931 72623 89754 109020 115750 135450 115890 114420 146750 126570 146190 149390 149190 132850 122020 154070 153540 141220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206100000 28254 4464 26538 53066;53067 42840 42840 1 9606 Homo sapiens 0.025279226380462205 VALSEPQPERR Unmodified 1280.6837 0.68369824 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1;H7C1K0 SRRT Serrate RNA effector molecule homolog yes no 0 0 1 4.5 0.5 1 1 35.661 35.73 3 2.1272E-12 7831 20230619_1885_Aki_TMTPro18x_K_F5 202.68 113.73 187530 143870 162230 173640 201910 206790 193760 206110 217380 195890 209690 182750 197270 184520 183250 225700 227220 192620 173140 132000 167540 173370 206320 206620 196600 210260 219780 198170 214780 186380 201230 192340 189240 224190 216740 183430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 317750000 28255 4464 26539 53068;53069 42841;42842 42842 2 9606 Homo sapiens 0.054583743407420116 VALSNMNVIDR Unmodified 1230.6391 0.63905624 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;B3KU93;A0A8V8TQ95;B3KTP2;A6NEC2;E9PPZ2;B7Z6T6;A0A7I2V604 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 8 0 1 52.211 52.288 2 2.7411E-06 14512 20230619_1888_Aki_TMTPro18x_K_F8 163.84 119.09 209990 163600 191140 218010 169430 220770 217080 221740 281440 270070 274550 308930 314910 292390 249730 383160 358600 432950 193970 150240 195620 215680 179390 222940 218130 227780 282800 271600 283940 311380 317340 306920 261870 385900 342570 410420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 203020000 28256 2933 26540 53070 42843;42844 42844 2 9606 Homo sapiens 0.03296227203054514 VALTGLTVAEYFR Unmodified 1438.782 0.78201531 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W0P7 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 3.5 0.5 1 1 63.604 63.623 2 4.452E-15 19947 20230619_1882_Aki_TMTPro18x_K_F3 202.34 181.89 184820 125750 185260 210820 169670 221480 205910 211120 279950 204970 213740 240820 232880 210780 254700 245420 223760 273080 170720 115880 188120 205900 178830 222690 207780 216270 278120 208740 223510 241810 238190 220210 256870 247650 214730 258900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 283110000 28257 3391 26541 53071;53072 42845;42846 42845 2 9606 Homo sapiens 0.08017557865923663 VALVYGQMNEPPGAR Unmodified 1600.8032 0.80316145 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W0P7 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 4.5 3.5 1 1 52.988 53.025 3 1.0261E-18 15636 20230619_1880_Aki_TMTPro18x_K_F1 198.33 173.61 123470 108560 122040 128140 126720 137340 142340 141020 164000 147370 171580 154690 176870 151450 137950 165460 164700 173080 114210 99530 124210 127950 131670 138290 143300 143990 166080 148870 175750 156690 178500 157080 142590 166410 157380 164280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 603670000 28258 3391 26542 53073;53074 42847;42848 42847 2 9606 Homo sapiens 0.0267919990315022 VALVYGQMNEPPGAR Oxidation (M) 1616.7981 0.79807608 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W0P7 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 1 0 7 0.816 1 1 1 48.017 48.092 3 0.00014501 12672 20230619_1887_Aki_TMTPro18x_K_F7 93.243 86.836 172330 139810 165730 169980 179460 197220 189530 195280 239770 191370 196260 181410 188550 164190 195420 199780 206590 190870 159290 128260 169140 169580 185680 197320 192060 199480 239550 193410 203000 184120 193060 171800 199230 199690 197440 181440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 363870000 28259 3391 26542 53075;53076;53077 42849;42850 42849 2006 2 9606 Homo sapiens 0.014348960405186517 VALWTEHGQFR Unmodified 1342.6782 0.67821894 4093 Q68DQ2;Q68DQ2-2;Q68DQ2-1 CRYBG3 Very large A-kinase anchor protein yes no 0 0 0 1 0 1 48.723 48.723 3 2.2494E-06 13853 20230619_1880_Aki_TMTPro18x_K_F1 152.04 113.02 21347 16452 19072 14587 19832 22325 23423 22479 27927 25031 24718 23052 30409 26397 27377 28861 27386 30069 19714 15055 19551 15013 20650 22002 23542 23008 28067 25115 25752 23619 30714 27254 27901 29028 26221 28537 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18853000 28260 4093 26543 53078 42851 42851 1 9606 Homo sapiens 0.020586955489307 VAMFLTDSNNIK Oxidation (M) 1367.6755 0.67550132 3911 Q15046;Q15046-2;Q6ZTI3 KARS Lysine--tRNA ligase yes no 0 1 0 8 0 1 57.853 57.901 3 0.005515 16935 20230619_1888_Aki_TMTPro18x_K_F8 70.195 55.749 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28261 3911 26544 53079 42852 42852 2589 1 9606 Homo sapiens 0.006370593090878174 VAMQDATAQMAMLQFISSGLSK Oxidation (M) 2343.1273 0.12727406 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;A0A7I2V5T4;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;A0A7I2V614;Q71UF1;A0A7I2V538;A0A7I2V6A6;A0A7I2V3C8;A0A7I2V5W7;A0A7I2V4I8;A0A7I2V3U7 ACO2 Aconitate hydratase, mitochondrial yes no 0 1 0 4.5 0.5 1 1 65.794 65.822 3 2.5021E-12 20697 20230619_1883_Aki_TMTPro18x_K_F4 130.25 122.29 5979.4 6865.1 6546.6 7563.6 7721.4 9132.3 8992.6 9845.7 7225.8 7099.2 9183.8 10140 11394 8695.9 9571.1 9320.3 10700 9091.1 5547.3 6285 6629.6 7603.8 7957.8 9130.7 8942 9933.1 7538.6 7410 9435.2 10109 11465 9051.8 9824.3 9346.1 10216 8643.1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 23068000 28262 1050 26545 53080;53081 42853;42854 42853 611 2 9606 Homo sapiens 0.009435517031306517 VAMQDATAQMAMLQFISSGLSK Unmodified 2327.1324 0.13235944 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;A0A7I2V5T4;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;A0A7I2V614;Q71UF1;A0A7I2V538;A0A7I2V6A6;A0A7I2V3C8;A0A7I2V5W7;A0A7I2V4I8;A0A7I2V3U7 ACO2 Aconitate hydratase, mitochondrial yes no 0 0 0 4.5 0.5 1 1 66.619 66.647 3 2.4468E-23 20816 20230619_1885_Aki_TMTPro18x_K_F5 177.93 166.68 28118 22928 26830 29261 25019 27299 36828 31808 34279 38084 39865 39660 38480 34342 40783 42641 41689 46726 25989 21044 27358 29009 26429 27858 36358 32368 35294 38186 40592 40016 39435 36039 41493 42939 39914 44319 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79380000 28263 1050 26545 53082;53083 42855 42855 1 9606 Homo sapiens 0.021878555657167453 VAMSHFEPNEYIHYDLLEK Oxidation (M) 2350.094 0.093983325 1050 Q99798;A2A274;A0A0K0K1H7;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V5A1;A0A7I2V614;A0A7I2V538;A0A7I2V6A6;A0A7I2V3C8;A0A7I2V5W7;A0A7I2V4I8;A0A7I2V3U7;A0A7I2V2Y4;A0A7I2V5U4 ACO2 Aconitate hydratase, mitochondrial yes no 0 1 0 6.5 0.5 1 1 55.975 56.042 4 3.0347E-14 16463 20230619_1886_Aki_TMTPro18x_K_F6 150.68 135.75 63689 57225 58580 73573 81759 72808 81193 75455 79433 85656 95120 101630 94246 87243 95751 108700 100170 112920 58888 52507 60359 72928 82922 73790 81827 77210 81684 86483 96886 101980 96333 91564 97662 109080 95887 107160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69792000 28264 1050 26546 53084;53085 42856 42856 612 1 9606 Homo sapiens -0.027059907528837357 VANASYYR Unmodified 942.45593 0.45593014 3231 O15042-2;O15042;E7ET15;O15042-3 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 0 0 0 4.5 3.5 1 1 37.634 37.627 2 0.0016112 8528 20230619_1888_Aki_TMTPro18x_K_F8 139.88 55.634 106340 82696 94657 95859 175680 234330 135980 146930 252280 36002 44906 40833 40263 33911 78274 32139 45462 34727 98209 75841 98413 97461 175610 224270 142770 153030 241460 43011 55642 41103 43123 35116 76853 32627 43740 32995 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 66491000 28265 3231 26547 53086;53087 42857;42858 42858 2 9606 Homo sapiens -0.017599587964355123 VANHMDGFQR Oxidation (M) 1189.5298 0.52984014 1578 A0A5F9ZHN7;Q9NTJ5;E9PGZ4;B4DVV3;Q9NTJ5-2;F8WDN7 SACM1L Phosphatidylinositide phosphatase SAC1 yes no 0 1 0 4.5 0.5 1 1 30.317 30.389 3 0.0021159 5837 20230619_1885_Aki_TMTPro18x_K_F5 79.311 53.192 54935 32315 55968 61685 75686 66886 57700 74378 75196 69793 85947 85004 80580 70481 73277 76527 99767 85392 50716 29855 57068 59907 76469 67403 59823 75296 76034 71228 87420 85127 82099 73495 76113 77299 95101 81064 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56728000 28266 1578 26548 53088;53089 42859;42860 42860 1034 2 9606 Homo sapiens -0.05734358696417985 VANHMDGFQR Unmodified 1173.5349 0.53492552 1578 A0A5F9ZHN7;Q9NTJ5;E9PGZ4;B4DVV3;Q9NTJ5-2;F8WDN7 SACM1L Phosphatidylinositide phosphatase SAC1 yes no 0 0 0 6 0 2 36.224 36.285 3 0.00087996 8056 20230619_1886_Aki_TMTPro18x_K_F6 103.69 97.587 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28267 1578 26548 53090;53091 42861;42862 42861 2 9606 Homo sapiens -0.044900548337864166 VANLLLCMYAK Unmodified 1294.6777 0.67774993 4709 Q9Y2Q5;Q9Y2Q5-2 LAMTOR2 Ragulator complex protein LAMTOR2 yes no 0 0 0 6 0 1 64.106 64.152 3 0.0035903 19991 20230619_1886_Aki_TMTPro18x_K_F6 72.2 54.469 48426 45495 47725 48581 53937 69528 60367 67062 81033 39802 41937 47652 45997 34949 48757 47397 46497 47361 44815 41664 48658 49105 55819 68634 61108 67915 79687 41991 45097 47606 46938 37139 49399 47432 44516 44981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13409000 28268 4709 26549 53092 42863 42863 1 9606 Homo sapiens 0.0421981651322767 VANPSGNLTETYVQDR Unmodified 1762.8486 0.84859132 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 0 0 4.5 0.5 1 1 47.247 47.306 2 1.4979E-33 12721 20230619_1883_Aki_TMTPro18x_K_F4 259.27 222.16 71607 58836 67416 79514 86872 102470 90129 82207 98525 106800 109030 109800 110810 95319 105600 114390 105970 118960 66182 54032 69217 78851 88842 101380 90919 86050 100370 106720 111460 110830 112790 99815 107550 114880 101480 112900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 348430000 28269 3484 26550 53093;53094 42864;42865 42864 2 9606 Homo sapiens -0.0023190310078007315 VANPTRP Unmodified 753.41334 0.41333704 2767 CON__ENSEMBL:ENSBTAP00000018574 yes yes 0 0 1 7 0.816 1 1 1 32.082 32.126 2 0.083649 6134 20230619_1887_Aki_TMTPro18x_K_F7 86.472 27.868 + 24113 14856 31136 33923 83984 101790 55077 55672 96398 40077 114270 182700 58440 84830 131380 25031 109180 137430 22316 13763 31878 33483 82417 96634 58442 59667 96223 45753 114510 175290 65086 87444 130500 32760 104880 129240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57717000 28270 2767 26551 53095;53096;53097 42866 42866 1 9606 Homo sapiens 0.02676690865996534 VANTSTQTMGPR Oxidation (M) 1277.6034 0.60339901 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;E7EQV3;A0A7I2YQ88;E7ERJ7;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;H0YAS6;H0YB75;H0YAW6 PABPC1 Polyadenylate-binding protein 1;Polyadenylate-binding protein yes no 0 1 0 6.5 0.5 2 2 30.733 30.801 2;3 0.0081165 5665 20230619_1887_Aki_TMTPro18x_K_F7 66.708 49.765 20279 12580 20859 18362 18861 30949 25789 23573 32841 18146 20909 12958 17019 14340 19521 13856 23709 11351 18728 11577 21114 18226 20023 30131 25802 24438 32517 18514 21794 13465 17623 14723 20000 13815 22558 10853 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 20881000 28271 566 26552 53098;53099;53100;53101 42867;42868 42868 335 2 9606 Homo sapiens -0.024298550446019362 VANTSTQTMGPR Unmodified 1261.6085 0.60848439 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;E7EQV3;A0A7I2YQ88;E7ERJ7;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;H0YAS6;H0YB75;H0YAW6 PABPC1 Polyadenylate-binding protein 1;Polyadenylate-binding protein yes no 0 0 0 8 0 1 35.545 35.534 2 1.7203E-07 7709 20230619_1888_Aki_TMTPro18x_K_F8 168.22 152.02 22286 10497 21236 23685 21766 26749 19694 19867 34433 18939 14055 11843 20611 15260 14746 12979 22422 11576 20544 9737.6 21681 22842 22568 26627 20423 20750 33403 19024 15641 12457 20552 15525 15504 13012 21304 11049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12916000 28272 566 26552 53102 42869 42869 1 9606 Homo sapiens -0.011855511819703679 VANVELYYR Unmodified 1125.5819 0.58185893 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5;J3KS13 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 7.5 0.5 1 1 50.878 50.955 2 1.7031E-05 14009 20230619_1887_Aki_TMTPro18x_K_F7 169.12 124.15 654130 487220 566460 688030 532930 780780 744480 711220 876580 783210 772250 797320 825450 682640 758760 887730 896390 915550 603840 447830 583320 679150 563740 780160 742190 733420 881090 788360 799760 804980 837680 718960 781040 889920 856460 869230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 896920000 28273 826 26553 53103;53104 42870;42871 42870 2 9606 Homo sapiens 0.024091279889717043 VANVSAAEDSVSQR Unmodified 1431.6954 0.69538514 4627 Q9NY93-2;Q9NY93;Q53HB9;G3V0G3;H7C3E9;F8WDT8 DDX56 Probable ATP-dependent RNA helicase DDX56 yes no 0 0 0 3 0 1 42.222 42.284 2 7.1323E-22 10594 20230619_1882_Aki_TMTPro18x_K_F3 233.32 194.02 29835 21233 25708 27967 31556 38650 32729 30052 45671 34275 43082 37457 47059 32466 31095 47882 41489 35941 27534 19505 26567 27817 32410 38060 33315 31411 45645 34547 44431 37766 47100 34481 32566 47152 39558 34284 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34455000 28274 4627 26554 53105 42872 42872 1 9606 Homo sapiens -0.003194734265889565 VAPAEPQEAPDSTAAGGSASK Unmodified 1939.9123 0.91231379 316 A0A140VJH7;A0A024R529;Q3LXA3;I3L252;H0YCY6;Q3LXA3-2 DAK;TKFC Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes no 0 0 0 3 0 1 42.384 42.45 3 0.0013466 10680 20230619_1882_Aki_TMTPro18x_K_F3 70.453 55.298 30402 20235 28281 41692 28101 35607 35728 40621 48544 39275 55781 63073 59352 57061 36565 58330 87085 91904 28063 18706 28993 40208 29469 36531 35989 41132 48953 40503 57056 62754 59481 59136 40488 60394 82867 86917 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75024000 28275 316 26555 53106 42873 42873 1 9606 Homo sapiens -0.020045874543257014 VAPAPAAADAEVEQTDAESK Unmodified 1968.9276 0.9276295 1694 Q9UG73;A0A7P0T893;Q8NE02;O43823 DKFZp586B1222;AKAP8 A-kinase anchor protein 8 yes no 0 0 0 1.5 0.5 1 1 48.061 48.097 3 1.7243E-22 13558 20230619_1881_Aki_TMTPro18x_K_F2 180.64 170.02 48181 37462 46836 42133 50331 55633 59523 57848 64520 57939 55367 40521 53574 42728 50434 55573 47759 41108 44527 34346 47723 42375 52247 55287 59624 58915 65070 58036 57062 42064 54563 44690 51220 54823 45675 39222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 319040000 28276 1694 26556 53107;53108 42874 42874 1 9606 Homo sapiens -0.018077206571433635 VAPAPAAVVPPTGPGMAPVPTGVFTDIPISNIR Unmodified 3208.7318 0.731841 239 P10515;A0A024R3D8;Q86YI5;A0A7P0TBE2;A0A7P0TAX2;A0A7P0TAG1;B4DJX1;A0A7P0TBK2;A0A7P0T997;A0A7P0Z4G4;H0YDD4;E9PEJ4;A0A7P0TA47;B4DS43;Q01991 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial;Acetyltransferase component of pyruvate dehydrogenase complex yes no 0 0 0 3.5 0.5 1 1 64.432 64.452 4 4.0734E-06 20199 20230619_1883_Aki_TMTPro18x_K_F4 81.242 77.674 3154.2 2167.9 2940.5 3834.2 3638 2841.2 2330.7 2840.3 3646.9 3037.1 2976.1 3285.6 5006.8 3824.8 4927.6 3727.3 4427.1 5509.5 2912 1999 3017.8 3718.4 3682.9 2949.8 2469 2908.5 3617 3069 3177.6 3342.5 5038.4 3928 4977.7 3850.2 4248.2 5210.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84792000 28277 239 26557 53109;53110 42875 42875 1 9606 Homo sapiens 0.21582434934134653 VAPAPARPSGPSK Unmodified 1233.683 0.68296996 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 1 3.5 0.5 1 1 35.619 35.671 3 0.00014254 7830 20230619_1882_Aki_TMTPro18x_K_F3 100.28 75.066 249150 176140 217420 251610 330690 351900 305230 302300 423290 78887 87096 55786 72843 53509 154410 76759 117430 45275 229940 161960 225420 249050 334020 346950 312490 306270 410010 91711 104510 57945 78781 56509 153070 75264 112210 43601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 272330000 28278 2181 26558 53111;53112 42876 42876 1 9606 Homo sapiens 0.07547579691686224 VAPAPAVVK Unmodified 850.52764 0.52763852 3722 P62424;Q5T8U3 RPL7A 60S ribosomal protein L7a yes no 0 0 0 4.5 3.5 1 1 45.131 45.131 2;3 0.00021189 11495 20230619_1888_Aki_TMTPro18x_K_F8 135.35 70.312 302890 204840 240460 246860 311660 413330 329250 312350 495180 83446 71463 70100 82739 58723 140530 87303 116600 51861 279290 188040 250690 247960 319590 402720 335580 319910 476820 97125 93858 71617 86982 62465 140230 85477 111350 49871 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 291920000 28279 3722 26559 53113;53114 42877;42878 42878 2 9606 Homo sapiens 0.09639580628083877 VAPAQPSEEGPGR Unmodified 1293.6313 0.63132832 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 0 2.5 0.5 1 1 35.474 35.531 2 3.710399999999999E-21 7757 20230619_1882_Aki_TMTPro18x_K_F3 235.01 180.86 126840 63816 99052 114960 112650 129910 113000 106740 150200 145950 157300 147740 162920 120630 130590 113660 159330 135690 116790 58958 103230 111970 116130 129620 115060 111720 151200 145500 161180 148890 164440 125090 134830 115640 152000 128730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 328160000 28280 2578 26560 53115;53116 42879;42880 42880 2 9606 Homo sapiens -0.003742087928685578 VAPAQPSEEGPGRK Unmodified 1421.7263 0.72629134 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 1 5 0.816 1 1 1 35.451 35.515 3 2.3375E-09 7722 20230619_1885_Aki_TMTPro18x_K_F5 174.51 150.04 51117 26321 42893 45721 52656 56261 50762 52670 71049 60594 70803 75122 81503 65856 51828 64027 86901 83541 47094 24301 44417 44686 53915 55982 51918 54259 71196 61286 73103 75262 81440 68182 55220 65429 82784 79153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 277380000 28281 2578 26561 53117;53118;53119 42881 42881 1 9606 Homo sapiens 0.03229724678317325 VAPAQPSEEGPGRKDENK Unmodified 1907.9337 0.93371793 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 2 4 0 1 36.215 36.261 4 0.00022566 8034 20230619_1883_Aki_TMTPro18x_K_F4 85.576 73.262 52913 45314 43941 45310 61315 53617 41476 59822 70267 71358 71440 62201 77623 62105 50947 95816 99877 61083 48873 41488 45619 45909 61759 53794 43914 60911 70055 71219 73395 63654 77794 65816 55209 93668 94820 58527 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59559000 28282 2578 26562 53120 42882 42882 1 9606 Homo sapiens 0.01606842365049488 VAPEEHPVLLTEAPLNPK Unmodified 1953.0571 0.057127534 3112;3679;3167 P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;I3L3I0;I3L1U9;J3KT65;I3L3R2;A1E282;Q562L5;Q562Z7;Q562N0;Q562Y6;Q562S0;Q562X9;Q562N8;Q562N6;Q562P0;Q562L9;Q562U2;Q562L6;Q562N4;Q562R8;Q562P9;Q562Z4;Q562V5;K7EM38;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;B4DW52;E7EVS6;A0A2R8Y793;A0A2R8YGF8;A0A6Q8PH58;G5E9R0 ACTG1;ACT;ACTB;PS1TP5BP1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 0 0 4.52 1.65 1 2 2 4 7 3 1 1 62.943 62.983 3;4 9.6573E-24 15376 20230619_1886_Aki_TMTPro18x_K_F6 197.75 53.874 2059200 1565800 1910300 2032200 2127600 2416800 2269200 2320700 2519200 2591800 2267400 2305900 2781200 2193500 2200800 2605400 2368200 2420800 1902100 1437800 1957100 2018800 2197500 2412100 2287400 2383900 2544500 2596100 2360600 2349600 2793500 2289000 2259600 2600200 2264600 2301100 12 12 13 14 13 14 13 13 14 13 13 12 13 13 13 14 12 13 183220000000 28283 3112;3167;3679 26563 53121;53122;53123;53124;53125;53126;53127;53128;53129;53130;53131;53132;53133;53134;53135;53136;53137;53138;53139;53140;53141 42883;42884;42885;42886;42887;42888;42889;42890;42891;42892;42893;42894;42895;42896;42897 42895 15 9606 Homo sapiens 0.11872125483478158 VAPLGEEFR Unmodified 1016.5291 0.52909508 2781 CON__P15497 yes yes 0 0 0 3.5 0.5 1 1 49.74 49.795 2 0.00010368 13874 20230619_1883_Aki_TMTPro18x_K_F4 155.03 128.61 + 227400 553320 598150 294300 866030 1051800 721760 682960 930150 806610 1355900 1722500 639410 833360 1464500 658540 892320 1601500 215700 503490 579260 329540 874520 998090 742680 726110 950910 836240 1343400 1674400 715590 879030 1439000 719800 864210 1508500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 954940000 28284 2781 26564 53142;53143 42898;42899 42899 2 0.021491699261900976 VAPPAVLNDISK Unmodified 1222.6921 0.69213767 2894 E7EPN9;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-6;Q9Y520-2;Q9Y520-3;H7C5N8;A0A2R8YET2;A0A2R8Y7F4 PRRC2C Protein PRRC2C yes no 0 0 0 8 0 1 57.141 57.193 3 8.4099E-05 16651 20230619_1888_Aki_TMTPro18x_K_F8 113.22 82.151 63485 56685 64204 63674 56069 74182 78906 63806 75521 71120 66376 66162 72807 59663 68178 77973 74153 73511 58741 51944 65064 63885 59558 73963 78095 66139 76763 71356 68830 67184 73879 62738 69793 77784 70887 69871 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36089000 28285 2894 26565 53144 42900 42900 1 9606 Homo sapiens 0.08969928257351967 VAPPGLTQIPQIQK Unmodified 1488.8664 0.86641364 1923 Q6LEU2;A3KLL5;P05026-2;P05026;A0A8I5KNT2;B7Z9S8;A6NGH2 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 0 3 0 1 58.636 58.666 3 0.00027981 17866 20230619_1882_Aki_TMTPro18x_K_F3 103.88 84.119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28286 1923 26566 53145 42901 42901 1 9606 Homo sapiens 0.14153508682693428 VAPQNDSFGTQLPPMHQQQR Oxidation (M) 2294.0862 0.086212606 2644 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1 FUBP1 Far upstream element-binding protein 1 yes no 0 1 0 7.5 0.5 2 2 41.795 41.832 3 3.9803E-05 9695 20230619_1887_Aki_TMTPro18x_K_F7 85.937 70.515 22409 18124 26369 30185 31518 36901 28935 25067 38630 30299 36826 38887 39421 29080 31044 28848 41305 46729 20750 16688 26559 29545 32283 36512 29616 26589 38707 30631 37983 38732 39730 30355 32268 29997 39459 44174 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 105720000 28287 2644 26567 53146;53147;53148;53149 42902;42903;42904 42902 1595 3 9606 Homo sapiens -0.009067052298178169 VAPQNDSFGTQLPPMHQQQR Unmodified 2278.0913 0.091297983 2644 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1 FUBP1 Far upstream element-binding protein 1 yes no 0 0 0 7.5 0.5 1 1 45.455 45.512 3 1.2439000000000001E-29 11703 20230619_1888_Aki_TMTPro18x_K_F8 198.42 190.13 18100 13377 19424 22464 15643 25581 22351 17529 21851 21846 22940 21696 25144 21757 17126 30694 29200 31242 16737 12322 19596 21954 16783 25412 22126 18601 22331 21856 23565 22058 25227 22915 18298 30685 27836 29661 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201320000 28288 2644 26567 53150;53151 42905 42905 1 9606 Homo sapiens 0.0033759863276827673 VAPQNDSFGTQLPPMHQQQSR Oxidation (M) 2381.1182 0.11824102 4322 Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 yes no 0 1 0 7 0 1 41.172 41.243 3 0.00012781 9759 20230619_1887_Aki_TMTPro18x_K_F7 72.568 67.04 2609.7 3350.6 3328.1 2886.5 2885 2968.5 2551.8 2390.7 2603.3 3884.8 2295.1 2198.2 5118.8 3926.8 3416.3 5551.6 3669 4319.9 2427.2 3060.6 3310.7 2958.1 3019 2986.8 2596.3 2522.3 2649.5 3795.6 2491.9 2370.9 5051.2 4081.8 3529.7 5476.9 3512.5 4113.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13928000 28289 4322 26568 53152 42906 42906 2731 1 9606 Homo sapiens -0.01707337546713461 VAPQNDSFGTQLPPMHQQQSR Unmodified 2365.1233 0.12332639 4322 Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 yes no 0 0 0 8 0 1 45.572 45.6 3 1.4668E-16 11712 20230619_1888_Aki_TMTPro18x_K_F8 159.72 149.22 29752 21933 25139 31411 26130 39592 32062 37231 47007 36129 34005 45201 50457 39858 25836 64184 52084 71177 27459 20164 25990 31030 27347 39316 32440 38151 46510 36872 36260 45319 49823 42599 28373 64361 49712 67460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37591000 28290 4322 26568 53153 42907;42908 42907 2 9606 Homo sapiens -0.004630336840818927 VAPSKWEAVDESELEAQAVTTSK Unmodified 2474.2177 0.21766351 3231 O15042-2;O15042;E7ET15;O15042-3;H7C4V2 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 0 0 1 4 0.816 1 1 1 59.463 59.492 4 1.46E-08 17690 20230619_1885_Aki_TMTPro18x_K_F5 116.24 107.2 53133 43337 50741 46649 44503 52914 50304 54620 56741 56259 51908 55971 53014 48122 60809 58466 58454 62660 49111 39710 51625 46959 46916 53077 50614 55705 57268 56751 53588 56553 54465 50442 61556 58830 55981 59455 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 43157000 28291 3231 26569 53154;53155;53156 42909;42910 42909 2 9606 Homo sapiens 0.03952338828412394 VAQGIREEEVSYQLAFNK Unmodified 2080.0589 0.058918448 754 A0A024RDA1;A1LT29;Q9NV70-2;Q9NV70 EXOC1 Exocyst complex component 1 yes no 0 0 1 7 0 1 56.595 56.653 3 1.294E-18 16440 20230619_1887_Aki_TMTPro18x_K_F7 179.74 151.44 61079 54215 59825 72491 53167 60483 67090 66957 66355 87712 79589 91495 96073 78231 77520 101920 93469 99710 56499 49768 60858 71533 56122 62216 66843 68536 68288 87590 81833 92227 96632 82400 80171 101840 89319 94705 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21965000 28292 754 26570 53157 42911 42911 1 9606 Homo sapiens 0.06209134501432345 VAQGVSGAVQDK Unmodified 1157.6041 0.60405094 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 0 0 6 0.816 1 1 1 43.619 43.703 3 4.9461E-06 11060 20230619_1886_Aki_TMTPro18x_K_F6 140.91 112.99 107990 63583 119370 114890 131390 148570 114570 129100 131990 113940 174240 188240 176120 163340 138770 87690 197500 177180 99766 58694 120450 112170 135090 147130 117160 132820 135040 118260 176900 186710 178020 165340 144700 94554 188260 167410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 480680000 28293 1454 26571 53158;53159;53160 42912 42912 1 9606 Homo sapiens 0.03155307666770568 VAQIQNAGLGEFR Unmodified 1401.7365 0.7364621 4684 Q9ULR0;Q9ULR0-2;Q9ULR0-1;D6RC18;A8MVI5 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes no 0 0 0 8 0 1 53.06 53.135 2 2.2934000000000001E-35 14905 20230619_1888_Aki_TMTPro18x_K_F8 237.68 209.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28294 4684 26572 53161 42913 42913 1 9606 Homo sapiens 0.051663324035416736 VAQLDQLLHYR Unmodified 1354.7357 0.73573382 2218 B2R5M3;P05060;B4DEA7 CHGB Secretogranin-1;PE-11;GAWK peptide;CCB peptide yes no 0 0 0 2 0 1 57.269 57.285 3 2.3593E-23 17517 20230619_1881_Aki_TMTPro18x_K_F2 248.09 179.47 29649 25098 29969 53680 26223 19231 42834 42070 39125 31359 29774 27112 33243 25946 26790 28858 30685 22095 27424 23194 30502 51345 27875 22566 42096 41169 39667 32120 31125 27692 33501 26960 27577 28577 29263 21089 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60338000 28295 2218 26573 53162 42914 42914 1 9606 Homo sapiens 0.07255537754508623 VAQLEQVYIR Unmodified 1217.6768 0.67682195 3720 P62318;P62318-2 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes no 0 0 0 7.5 0.5 1 1 54.644 54.709 2 4.028E-05 15523 20230619_1888_Aki_TMTPro18x_K_F8 168.83 122.16 696720 582700 620930 714920 697480 841330 692740 716730 913830 825590 833310 858450 905660 782140 805320 1018100 921100 1028500 643750 534540 638830 712600 719440 838150 705630 743680 915250 829920 862020 867670 917510 821780 828290 1019200 880920 976370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3412999999.9999995 28296 3720 26574 53163;53164 42915;42916 42916 2 9606 Homo sapiens 0.07669061460183002 VAQLTNFPK Unmodified 1016.5655 0.56548059 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67;Q7Z3K3-3 POGZ Pogo transposable element with ZNF domain yes no 0 0 0 3 0 1 53.975 54.027 2 0.00083129 15986 20230619_1882_Aki_TMTPro18x_K_F3 133.57 100.73 44282 36197 46298 43985 40385 47812 48117 46327 54104 49264 48695 44296 53250 44188 45630 56375 59640 58438 40962 33205 46765 43845 42646 48019 48261 47511 54559 49496 50382 45225 53852 46248 47365 56535 56919 55488 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51875000 28297 4164 26575 53165 42917 42917 1 9606 Homo sapiens 0.05786046822890967 VAQPGPLEPEEPR Unmodified 1417.7201 0.72014333 4363 Q96HY6;A0A0A0MRX2;Q96HY6-2 DDRGK1 DDRGK domain-containing protein 1 yes no 0 0 0 2 0 1 44.255 44.338 2 2.0864E-05 11854 20230619_1881_Aki_TMTPro18x_K_F2 122.51 86.177 37912 30771 37267 36714 38689 39445 47312 46123 54416 44255 50074 49300 53702 38572 50175 56539 52422 58377 35050 28223 37932 36645 40283 39843 47413 46606 54820 44983 51737 49491 54480 41126 51245 56605 50176 55405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45029000 28298 4363 26576 53166 42918 42918 1 9606 Homo sapiens 0.027992064467980526 VAQPTITDNK Unmodified 1085.5717 0.57168818 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5F3 FLNA;FLJ00119 Filamin-A yes no 0 0 0 5.5 0.5 1 1 43.027 43.114 2 4.7478E-10 10822 20230619_1886_Aki_TMTPro18x_K_F6 245.5 166.73 133550 71605 124640 142150 215310 235770 174410 182410 228450 167670 225930 262840 217420 204760 180570 115240 260720 242350 123150 66228 128830 138780 215470 229930 179840 189590 229350 173290 231740 260200 220620 208440 188290 124620 248550 228910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 148090000 28299 3484 26577 53167;53168 42919;42920 42920 2 9606 Homo sapiens 0.032325202637593975 VAQREEELEETGNQHNDVEIEEAGEEEEK Unmodified 3368.4764 0.47640999 4506 Q9H307;A8K964;B4DTD4;B4E392 PNN Pinin yes no 0 0 1 1 0 1 45.951 45.951 5 7.2403E-29 12689 20230619_1880_Aki_TMTPro18x_K_F1 175.76 164.24 21459 17508 15717 25049 20650 24881 16883 24311 33115 23335 26377 25933 31768 24841 21372 34600 32943 32684 19798 16089 16571 24652 21026 25146 17752 24835 32523 23738 27591 26202 31759 26182 22627 34462 31406 31064 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43289000 28300 4506 26578 53169 42921 42921 1 9606 Homo sapiens -0.11308916039342876 VAQSIEDHHQEVIGFCR Unmodified 2023.9534 0.95340752 1839 A0A8V8TNY3;Q9NZB2;Q9NZB2-6;Q9NZB2-4;Q9NZB2-5;Q9NZB2-2;A0A0C4DH52 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 0 0 0 5 0 1 44.856 44.934 4 0.020627 11635 20230619_1885_Aki_TMTPro18x_K_F5 58.246 38.923 27137 19985 25978 21866 26617 27507 30313 25532 34988 27870 29775 27439 30550 25242 26595 32194 32152 28065 25068 18323 26470 22020 27686 27355 30481 26290 35149 28049 30810 27819 30970 26475 27449 31995 30681 26715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36318000 28301 1839 26579 53170 42922 42922 1 9606 Homo sapiens -0.01761104895876997 VAQTEFDR Unmodified 964.46141 0.46140945 505 B7ZC39;A0A024R896;B7ZC38;Q9NR46;Q9NR46-2;Q71RA6 SH3GLB2 Endophilin-B2 yes no 0 0 0 2.5 0.5 1 1 39.279 39.339 2 0.020937 9510 20230619_1881_Aki_TMTPro18x_K_F2 88.177 59.027 84106 69741 74906 79571 82794 75054 87475 80346 93958 94721 98115 102930 107460 96363 85811 118100 124050 106190 77707 63934 76984 79523 85388 76431 88124 82138 95552 95209 100900 103920 108430 100720 89920 117580 118200 101050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106920000 28302 505 26580 53171;53172 42923 42923 1 9606 Homo sapiens -0.022242800046228695 VAQVAEITYGQK Unmodified 1305.6929 0.69286595 1421 E5RHW4;A0A384ME54;O94905;E5RJ09 ERLIN2 Erlin-2 yes no 0 0 0 7.5 0.5 1 1 52.78 52.852 3 3.9148E-07 14758 20230619_1888_Aki_TMTPro18x_K_F8 155.47 123.14 102680 87488 99327 104220 128730 142120 124050 125800 148750 118600 138610 145400 155020 126510 142400 137890 158970 144350 94942 80228 101660 104380 131300 140460 126100 129430 149660 121130 143460 145760 157070 131730 145900 138780 151840 137090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 446090000 28303 1421 26581 53173;53174 42924 42924 1 9606 Homo sapiens 0.05224722906405077 VAQWMIQQPHK Unmodified 1364.7023 0.7023252 1168 Q86U79;A0A140VJE0;P55263-2;P55263;P55263-3;A0A5K1VW54;A0A5K1VW94;P55263-4;A0A5F9ZH31;A0A5F9ZH72;A0A5F9ZGZ8 ADK Adenosine kinase yes no 0 0 0 4 0 1 51.324 51.351 4 0.032594 14622 20230619_1883_Aki_TMTPro18x_K_F4 59.542 43.318 58957 48384 50645 57373 58517 72921 59472 62849 85825 57212 56701 61656 71863 60717 60539 86962 73254 71848 54453 44374 52307 57398 60323 72306 60703 64738 84715 58337 60234 62419 72355 64024 62608 86039 69956 68407 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19892000 28304 1168 26582 53175 42925 42925 1 9606 Homo sapiens 0.03456212710966611 VARPLPAEEPER Unmodified 1362.7256 0.72556306 442 P26358;A0A024R7E3;A0A7I2V5D0;A0A7I2YQQ0;A0A7I2YQA8;P26358-2;I6L9H2;A0A7I2V490;Q59FP7;A0A7I2V5F1;A0A7I2V311;A0A7I2V5F6;A0A7I2V2G5;K7ENQ6 DNMT1 DNA (cytosine-5)-methyltransferase 1;DNA (cytosine-5)-methyltransferase yes no 0 0 1 3 0.816 1 1 1 35.465 35.519 3 7.6841E-07 7773 20230619_1882_Aki_TMTPro18x_K_F3 148.96 86.696 200680 139510 178350 172390 146610 187290 178520 179100 216820 217710 224900 200190 246430 200150 186280 228670 219590 203220 185210 128080 182540 171630 155970 188020 179410 184550 219070 217470 231060 204120 247900 208000 192540 227810 209670 193350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 274320000 28305 442 26583 53176;53177;53178 42926;42927 42927 2 9606 Homo sapiens 0.05870930029300325 VASGGGGVGDGVQEPTTGNWR Unmodified 1999.9348 0.93478057 3213 O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein yes no 0 0 0 4.5 0.5 1 1 46.709 46.768 3 1.6535E-11 12411 20230619_1885_Aki_TMTPro18x_K_F5 127.32 122.43 13673 11281 10967 12753 13814 16433 15059 16958 19372 14250 15296 14831 20449 14885 14948 14789 16626 16897 12623 10341 11422 12809 14180 16347 15242 17205 19316 14574 16102 15036 20429 15364 15387 14984 15893 16026 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184220000 28306 3213 26584 53179;53180 42928 42928 1 9606 Homo sapiens -0.025189432660681632 VASLLVK Unmodified 728.47963 0.47962569 1184;4584 Q6LET3;A0A140VJL3;P00492;Q9NRG1;Q9NRG1-2 HPRT1;PRTFDC1 Hypoxanthine-guanine phosphoribosyltransferase;Phosphoribosyltransferase domain-containing protein 1 no no 0 0 0 3.5 0.5 1 1 55.951 55.976 2 0.0090158 16640 20230619_1883_Aki_TMTPro18x_K_F4 119.89 8.609 288800 219420 246160 219960 246380 279890 280760 258750 308370 279200 279680 267800 289720 236090 288080 338370 334310 273420 266600 200990 253460 223090 257000 278090 281910 266340 311410 280800 288720 271500 295310 249940 295770 334610 319000 260610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 999540000 28307 1184;4584 26585 53181;53182 42929 42929 1 9606 Homo sapiens 0.10452506708043074 VASPALR Unmodified 712.42317 0.42317345 2495 B4DII5;B4DWX3;O60684;Q5TFJ7 KPNA6 Importin subunit alpha;Importin subunit alpha-7 yes no 0 0 0 1 0 1 37.007 37.007 2 0.042905 8783 20230619_1880_Aki_TMTPro18x_K_F1 89.427 38.39 65588 46385 70949 77114 90686 88368 73336 77406 97994 82498 93053 97579 92174 84390 86532 69981 118890 97834 60637 42731 71935 75440 92106 88242 75732 79973 98213 83604 95690 97857 93911 86734 89768 72184 113300 92706 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30018000 28308 2495 26586 53183 42930 42930 1 9606 Homo sapiens 0.055458788713735885 VASPSPSGSVLFTDEGVPK Unmodified 1872.9469 0.94690838 4337 Q96DP0;P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial yes no 0 0 0 6.5 0.5 1 1 57.873 57.933 3 1.418E-08 17251 20230619_1886_Aki_TMTPro18x_K_F6 120.63 102.93 48508 40342 48594 52908 50142 65307 60744 58182 82024 60236 58649 68386 78730 66079 53706 78882 69524 91194 44859 37034 49427 52547 52355 64898 61256 59991 81378 61080 62189 68976 78545 68939 56071 79667 66518 86407 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138460000 28309 4337 26587 53184;53185 42931 42931 1 9606 Homo sapiens 0.045352804243748324 VASQGEVVR Unmodified 943.50869 0.50869399 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 3.5 0.5 1 1 34.166 34.225 2 2.258E-06 7226 20230619_1883_Aki_TMTPro18x_K_F4 189.73 148.5 87429 47362 105770 116760 135480 176190 115540 144230 134460 102150 172250 232440 151220 150190 169840 69526 187010 209200 80813 43972 106460 112810 138030 172680 118360 148380 137210 109440 174480 226890 156010 153380 172750 79325 178920 197140 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157340000 28310 3402 26588 53186;53187 42932;42933 42933 2 9606 Homo sapiens 0.034679992663768644 VASQGEVVRK Unmodified 1071.6037 0.60365701 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 1 7.5 0.5 1 1 35.957 35.986 3 7.149E-05 7860 20230619_1888_Aki_TMTPro18x_K_F8 136.94 104.39 141300 91814 200520 176270 287240 248150 191060 250210 197110 149800 220010 257550 192520 164080 246820 100870 243290 215500 130940 84789 199800 171940 288200 245510 198670 252600 201260 159970 223840 253140 199910 169080 248990 109290 232620 203570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 110610000 28311 3402 26589 53188;53189 42934;42935 42935 2 9606 Homo sapiens 0.07071932737562747 VASSPVMVSNPATR Oxidation (M) 1430.7188 0.71876312 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 1 0 1 0 1 41.768 41.768 2 8.6445E-05 10838 20230619_1880_Aki_TMTPro18x_K_F1 107.71 77.635 26794 20522 21126 26502 36470 38275 30285 28215 38064 36053 41828 40168 35267 30631 33197 35468 39099 37454 24723 18842 22194 26406 36513 37583 31120 29729 38482 36154 42433 40263 36109 32164 34131 35673 37342 35559 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30373000 28312 1331 26590 53190 42936 42936 842 1 9606 Homo sapiens 0.02063249086381802 VASSPVMVSNPATR Unmodified 1414.7238 0.7238485 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 2 0 1 44.505 44.587 2 1.3552999999999998E-21 11946 20230619_1881_Aki_TMTPro18x_K_F2 224.66 205.68 38102 30412 36995 41092 38809 44297 41440 39973 47783 46172 49770 49002 53044 40002 42390 50427 52836 49105 35218 27931 37727 40650 40258 44442 41831 41311 48401 46421 51097 49319 53498 42132 43911 50411 50426 46668 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89804000 28313 1331 26590 53191 42937 42937 1 9606 Homo sapiens 0.033075529490133704 VASSTLLDDRR Unmodified 1231.6521 0.65206377 3285 O60763;O60763-2 USO1 General vesicular transport factor p115 yes no 0 0 1 6 0 1 39.528 39.617 3 6.7029E-18 9346 20230619_1886_Aki_TMTPro18x_K_F6 240.15 177 111090 76512 115250 109520 153920 146140 132440 141030 131790 110200 137270 150550 133080 115580 152290 117490 155620 143430 102650 70360 117240 108360 156010 144900 134810 143570 134470 114240 140560 149790 136880 120470 154500 119610 148780 136000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209800000 28314 3285 26591 53192 42938 42938 1 9606 Homo sapiens 0.045503815867732555 VASTENGIIFGNIVYDVSGAASDR Unmodified 2454.2027 0.20268215 3646 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 7 0 1 64.213 64.243 3 4.3329000000000003E-63 19769 20230619_1887_Aki_TMTPro18x_K_F7 267.29 256.35 16972 15131 18122 19763 19254 28559 18617 20799 35431 21464 23501 26669 22095 16959 21497 25296 22185 24208 15711 13886 18348 19682 19983 28009 19323 21795 34619 21848 24626 26502 22560 18255 21931 25213 21234 22997 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59308000 28315 3646 26592 53193 42939 42939 1 9606 Homo sapiens 0.03374891751036557 VASTLTEEGGGGGGGGGSVAPKPPR Unmodified 2194.0978 0.097823149 1733 B4DQU6;D3DUR9;A0A804HJE2;Q8TF68-3;Q8TF68-2;Q8TF68;A9X425;A9X424;F5H105;F5H8L7;E9PHB3 ZNF384 Zinc finger protein 384 yes no 0 0 1 7 0 1 43.698 43.777 3 1.6397E-34 10822 20230619_1887_Aki_TMTPro18x_K_F7 195.13 186.4 14055 11653 9777.5 11158 10434 16556 13985 13339 18851 15804 13413 21673 22239 16790 15187 26563 22976 31245 12964 10666 10315 11384 10940 16250 14034 13915 18716 16027 14454 21559 22082 18011 16063 26755 21965 29596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18909000 28316 1733 26593 53194 42940 42940 1 9606 Homo sapiens 0.04853815065143863 VASVSQNAIVSAAGNIAR Unmodified 1726.9326 0.93259572 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 3.5 0.5 1 1 56.126 56.148 3 1.763E-24 16709 20230619_1883_Aki_TMTPro18x_K_F4 171.56 126.64 109610 85475 112690 112410 105830 189700 131150 116660 255120 116870 115270 134710 146000 122290 119520 135400 142650 146370 101350 78487 114220 112240 111970 184050 134410 124250 246840 119070 126260 135470 146860 127260 123360 136430 136290 138890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 527170000 28317 81 26594 53195;53196 42941 42941 1 9606 Homo sapiens 0.09820672786827345 VASVYEAPGFFLDLEPIPGALDAVR Unmodified 2645.3741 0.37410458 4267 V9HWF3;Q8TCD5;J3KSX6;J3KRC4;Q8TCD5-2 HEL74;NT5C 5'(3')-deoxyribonucleotidase, cytosolic type yes no 0 0 0 6.5 0.5 1 1 66.967 67 3 2.3281E-09 20873 20230619_1887_Aki_TMTPro18x_K_F7 118.22 105.16 4173.4 1414.7 3092.1 4765.7 4632.9 4419.6 5983 4213.8 4001.8 4847 4792.6 5981.1 4451.5 4196.6 4239.8 4609.8 5714.8 4708.1 3836.6 1327.4 3265.4 4523 4717 4485.9 5886.4 4343.5 4224.1 4895.7 4875.1 5953 4548.2 4406.5 4398 4631.2 5446.6 4474.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13940000 28318 4267 26595 53197;53198 42942 42942 1 9606 Homo sapiens 0.11723248789530771 VATAQDDITGDGTTSNVLIIGELLK Unmodified 2543.333 0.33302762 765 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8 CCT6A T-complex protein 1 subunit zeta yes no 0 0 0 5.2 0.748 1 2 2 66.58 66.62 3;4 6.8326E-20 20424 20230619_1886_Aki_TMTPro18x_K_F6 161.53 139.52 26761 20211 25924 25812 21134 23765 26565 26618 30463 28707 30162 34572 31870 27745 30066 35211 33369 37119 24721 18547 26331 25588 22484 24144 26558 27060 30757 29074 31068 34592 32362 29235 30816 35298 31916 35222 2 2 3 3 3 2 2 3 2 3 3 3 2 3 2 2 2 3 312360000 28319 765 26596 53199;53200;53201;53202;53203 42943;42944;42945 42944 3 9606 Homo sapiens 0.12309442959440275 VATAYRPPALR Unmodified 1213.6931 0.69314072 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;Q9BY44-2;H7C5R5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 1 6 0.816 1 1 1 41.444 41.527 3 4.088E-06 9890 20230619_1887_Aki_TMTPro18x_K_F7 146.48 123.26 255280 214720 240240 266750 273650 290030 287910 279080 351350 306870 323310 314700 351950 295290 294840 364280 340420 343080 235980 196990 245960 265400 282000 291310 291370 286640 353150 309020 334180 318610 355600 308880 303720 363580 325290 326080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 392160000 28320 4468 26597 53204;53205;53206 42946;42947 42947 2 9606 Homo sapiens 0.0948418741693331 VATFHDCEDAAR Unmodified 1390.5936 0.59356261 1177 Q86TM7;Q6P184;Q3SX58;A0A140VJI4;B4DEH1;Q9P2X0;Q9P2X0-2 DPM3 Dolichol-phosphate mannosyltransferase subunit 3 yes no 0 0 0 2 0.816 1 1 1 36.568 36.606 3 1.853E-18 8310 20230619_1881_Aki_TMTPro18x_K_F2 237.67 209.35 113100 70776 86371 108900 121980 118980 124860 120920 140830 123660 128900 142300 135540 116610 127010 121870 157380 139020 104220 65171 90626 106900 123920 119580 126160 123490 142070 125410 133210 142660 137760 121420 130940 123380 150160 131930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253960000 28321 1177 26598 53207;53208;53209 42948;42949 42948 2 9606 Homo sapiens -0.08611043049972977 VATLNSEEESDPPTYK Unmodified 1778.821 0.82103917 292 Q00341;A0A024R4E5;B2R5V9;Q00341-2;C9JIZ1;C9J5E5;C9JZI8;C9JES8;C9JHZ8;C9JK79;C9JHS7;C9JT62;C9JQ82;C9JHN6;C9JEJ8;C9JBS3;C9JMQ6 HDLBP Vigilin yes no 0 0 0 2 0 1 49.257 49.316 3 1.1418E-05 14125 20230619_1881_Aki_TMTPro18x_K_F2 100.41 89.14 36957 28341 34725 34434 35554 38325 39543 37049 43801 50825 47561 43729 51509 44959 40053 45407 52172 53065 34142 26005 35471 34333 36970 38439 39773 38303 44577 50409 48756 44746 51915 46380 41627 46038 49806 50317 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116510000 28322 292 26599 53210 42950 42950 1 9606 Homo sapiens -0.03721851151658484 VATNPSFDGR Unmodified 1062.5094 0.50942227 4257 Q8NHH9-2;Q8NHH9;B7Z2H0;B5MCN0;Q8NHH9-3;Q8NHH9-5;Q8NHH9-4;C9JQQ5;B7Z8V5;H7C3A2 ATL2 Atlastin-2 yes no 0 0 0 5 0 1 40.09 40.179 2 0.0011249 9551 20230619_1885_Aki_TMTPro18x_K_F5 112.04 7.6469 171340 119810 149130 167550 178990 205160 180220 188520 380470 167440 200850 227620 214610 174880 194190 204790 241860 226630 158120 110140 153910 165700 184130 204140 187610 193170 368330 172670 215210 226520 217720 183730 200500 206520 230850 215080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 473710000 28323 4257 26600 53211 42951 42951 1 9606 Homo sapiens -0.019332060845727028 VATPVDWK Unmodified 914.48617 0.48616764 3527 V9HWC7;P30041 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 0 7.5 0.5 1 1 52.525 52.599 2 0.026725 14764 20230619_1887_Aki_TMTPro18x_K_F7 83.005 47.512 125450 99463 116270 131530 130310 148270 154800 135080 182740 143950 131110 137170 159120 128560 171520 158460 141010 174130 115900 91331 119200 130370 134980 148330 155410 139210 182470 144910 138290 139270 162040 134560 172450 159670 135440 165100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219250000 28324 3527 26601 53212;53213 42952 42952 1 9606 Homo sapiens 0.025503998687554486 VATVSLPR Unmodified 841.50215 0.50215205 2772 CON__P00761 yes yes 0 0 0 3.5 2.69 1 1 1 1 44.989 45.041 2 0.0030771 12277 20230619_1880_Aki_TMTPro18x_K_F1 120.46 59.669 + 1052100 597030 725230 945570 1589800 1052300 1196100 1192400 1433200 910710 1150600 1100600 788630 773590 1012600 1076800 1164800 780700 968500 550230 777410 927120 1567900 1060600 1235200 1200900 1433600 941780 1177900 1098500 828140 823540 1034400 1060700 1110400 746050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 14953000000 28325 2772 26602 53214;53215;53216;53217 42953;42954;42955;42956 42953 4 0.07506106105665822 VATWFNQPAR Unmodified 1188.604 0.60399136 2040 Q6NZ55;A8K4C8;P26373;J3QSB4;P26373-2;H3BTH3;B4DGL7 RPL13 60S ribosomal protein L13 yes no 0 0 0 4.5 0.5 1 1 53.52 53.565 2 7.3E-07 15597 20230619_1883_Aki_TMTPro18x_K_F4 183.65 149.39 810090 631310 720790 721650 701810 928910 847880 819200 945600 507840 410600 325010 477770 348240 572330 566870 553900 374190 748170 578890 739590 724250 735880 920660 849060 836080 935270 525310 449220 339920 489920 370170 579200 555400 528910 358110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1510799999.9999998 28326 2040 26603 53218;53219 42957;42958 42957 2 9606 Homo sapiens 0.01723352457429428 VATWFNQPARK Unmodified 1316.699 0.69895438 2040 Q6NZ55;A8K4C8;P26373;J3QSB4;P26373-2;H3BTH3;B4DGL7 RPL13 60S ribosomal protein L13 yes no 0 0 1 6.5 0.5 1 1 49.391 49.472 3 0.00039263 13692 20230619_1886_Aki_TMTPro18x_K_F6 99.343 63.023 405200 435420 415910 349660 427010 381700 379370 437370 414040 408620 356950 320070 404540 297050 343610 433560 455690 338140 375490 397730 421180 361330 440660 385520 386700 441900 417940 411690 370740 328450 408320 314550 357110 427890 434100 322610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 188740000 28327 2040 26604 53220;53221 42959;42960 42959 2 9606 Homo sapiens 0.05327285928592573 VAVAAASKPHVEIR Unmodified 1446.8307 0.83069683 2949 P29762;F1T0F7;B5MCB5 CRABP1 Cellular retinoic acid-binding protein 1 yes no 0 0 1 2.5 0.5 1 1 41.876 41.947 4 2.6989E-05 10683 20230619_1881_Aki_TMTPro18x_K_F2 116.96 99.936 616280 485060 495780 606760 910970 1106400 832810 799890 769250 730820 869540 568060 617840 466080 680840 498500 568810 438730 568800 445160 520850 608790 912070 1073400 841880 835990 791010 737550 874510 581370 640820 486210 684000 497820 544420 417820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 847390000 28328 2949 26605 53222;53223 42961 42961 1 9606 Homo sapiens 0.12515471225697183 VAVAGCCHGELDK Unmodified 1414.6333 0.63331893 1830 A0A8V8TMX5;Q9UK59;A0A8V8TMH0;A0A8V8TNX0;A0A8V8TMF7;F8WAY1 DBR1 Lariat debranching enzyme yes no 0 0 0 5 0 1 40.68 40.768 3 4.7064E-05 9838 20230619_1885_Aki_TMTPro18x_K_F5 113.99 99.73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28329 1830 26606 53224 42962 42962 1 9606 Homo sapiens -0.05741239370900075 VAVATPAK Unmodified 755.45414 0.45413923 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;A0A7I2V2S8 NCL Nucleolin yes no 0 0 0 4.5 3.5 1 1 42.05 42.05 3 0.0017502 10967 20230619_1880_Aki_TMTPro18x_K_F1 100.45 63.43 140870 70849 145200 152890 205940 255830 167440 195660 234730 71716 96484 97177 81892 86939 135000 66531 118540 80997 129970 65644 148130 148790 208420 249200 173090 200600 229280 80249 104970 97227 86750 88857 135030 68245 113320 76915 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68489000 28330 1658 26607 53225;53226 42963;42964 42963 2 9606 Homo sapiens 0.06663032185610973 VAVATPAKK Unmodified 883.5491 0.54910224 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;A0A7I2V2S8 NCL Nucleolin yes no 0 0 1 4 0 1 40.224 40.266 3 0.066568 9649 20230619_1883_Aki_TMTPro18x_K_F4 44.309 32.462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28331 1658 26608 53227 42965 42965 1 9606 Homo sapiens 0.10266965656796856 VAVCDIPPR Unmodified 1025.5328 0.53280025 983;2562;3176 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain no no 0 0 0 6.09 0.793 3 4 4 44.802 44.887 2 8.9653E-05 11725 20230619_1885_Aki_TMTPro18x_K_F5 127.56 86.117 693390 525560 622330 662430 626730 715700 691650 657710 769340 725060 802810 810300 847470 701390 696160 752720 931540 864970 640320 482440 638420 658400 652790 718300 696100 677950 780590 731880 823980 814940 856380 730050 723800 761750 888550 820610 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 834840000 28332 983;2562;3176 26609 53228;53229;53230;53231;53232;53233;53234;53235;53236;53237;53238 42966;42967;42968;42969;42970;42971;42972;42973;42974 42967 9 9606 Homo sapiens 0.02105516428377996 VAVEEVDEEGK Unmodified 1202.5667 0.56666238 1428 P02545;A0A6Q8PFJ0;A0A384MQX1;P02545-3;P02545-6;P02545-2;W8QEH3;A0A804HL68;Q5I6Y5;A0A6Q8PHQ9;P02545-4;P02545-5;Q5TCI8;B4DFR3 LMNA Prelamin-A/C;Lamin-A/C yes no 0 0 0 1.5 0.5 1 1 46.503 46.543 3 3.6484E-07 12910 20230619_1880_Aki_TMTPro18x_K_F1 167.12 132.39 721160 536380 683260 803470 844790 904960 890330 877030 1090200 720080 873830 829460 909050 721030 858810 783620 913040 729530 666170 493350 700450 790340 866030 906440 900870 893850 1089300 740190 908010 833820 924020 750700 876650 783860 871790 694160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1665099999.9999998 28333 1428 26610 53239;53240 42975;42976 42975 2 9606 Homo sapiens -0.0265182838952569 VAVEHSYR Unmodified 959.48248 0.48247924 989 A0A0C4DFM2;Q6ZN55;Q6ZN55-2 ZNF574 Zinc finger protein 574 yes no 0 0 0 5 0 1 30.913 30.99 3 0.0089707 6034 20230619_1885_Aki_TMTPro18x_K_F5 78.516 49.429 25696 20066 22670 24140 29941 30383 29028 26386 43369 23656 32333 29863 29774 25422 30354 22866 32873 31098 23731 18409 23397 24125 30513 30166 29740 27168 42848 24291 33563 29890 30503 26243 30951 23507 31416 29456 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6895200 28334 989 26611 53241 42977 42977 1 9606 Homo sapiens 0.0011173009489766628 VAVEYLDPSPEVQK Unmodified 1572.8035 0.80353861 1173 J3QT28;A0A140VJF3;O43684-2;O43684;B4DDM6 BUB3 Mitotic checkpoint protein BUB3 yes no 0 0 0 4 0.816 1 1 1 57.089 57.122 3 9.1114E-09 16723 20230619_1885_Aki_TMTPro18x_K_F5 155.86 143.47 216360 161270 189940 219670 193070 208210 174600 192100 199970 245850 212560 230010 244250 196490 192260 267220 249640 271690 199750 148170 195310 216820 199870 211050 178060 198800 203160 245010 218950 233020 245780 207620 200010 267400 238450 257920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 547450000 28335 1173 26612 53242;53243;53244 42978;42979 42979 2 9606 Homo sapiens 0.040048981039717546 VAVFFGGLSIK Unmodified 1136.6594 0.65938097 724 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;F6WLT2;F6UJC5;A0A140T996;A0A140T9X9;A0A140TA18;F6TRA5;Q59G92;A0A0A0MT12;B4DIJ6;F6S4E6;B4DIZ8;A0A140T973;A0A140T9K1;A0A140T9L4;F6R6M7;F6QYI9;A0A0G2JJL7;A0A140T9K2;A0A140T9N3 DDX39B;hCG_2005638 Spliceosome RNA helicase DDX39B yes no 0 0 0 6.5 0.5 1 1 64.044 64.082 3 5.8611E-09 19953 20230619_1886_Aki_TMTPro18x_K_F6 171.85 134.83 102760 80286 97607 91464 84827 105860 108120 104640 119810 86494 90347 87790 88704 76671 100890 89027 85304 97598 94950 73617 99372 91691 89856 105910 108020 106510 120100 88482 94038 88716 91166 80121 101460 89786 81854 92563 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38024000 28336 724 26613 53245;53246 42980 42980 1 9606 Homo sapiens 0.09651765925195832 VAVGELTDEDVK Unmodified 1273.6402 0.64016167 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;B4DSV5 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 0 0 2.2 0.748 1 2 2 52.771 52.802 2;3 1.4829E-17 15665 20230619_1881_Aki_TMTPro18x_K_F2 218.6 172.61 297150 238040 244180 264060 208920 301850 273320 251530 301210 362730 348220 322310 377710 301690 309200 391540 361710 370730 274330 218190 252130 265060 222240 301120 272750 263450 307440 359380 356120 328430 381170 316750 318980 390600 345640 352310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 755180000 28337 2702 26614 53247;53248;53249;53250;53251 42981;42982;42983 42982 3 9606 Homo sapiens 0.014287200529452093 VAVLENQNK Unmodified 1013.5506 0.55055881 3460 Q53X93;P16220;P16220-1;Q5U0J5;P16220-3;Q03060-21;Q03060-26;G5E998;B2R8K4;Q53RU9;Q03060-31;Q03060-32;Q03060-6;F1JVV6;E9PAR2;P18846-2;F1JVV5;Q59FC7;Q03060-23;Q03060-8;Q03060-9;Q03060-24;P18846 CREB1;CREM;EWSR1/ATF1 fusion;ATF1 Cyclic AMP-responsive element-binding protein 1;Cyclic AMP-dependent transcription factor ATF-1 yes no 0 0 0 7 0 1 45.821 45.909 2 4.272E-05 11689 20230619_1887_Aki_TMTPro18x_K_F7 130.75 93.189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28338 3460 26615 53252 42984 42984 1 9606 Homo sapiens 0.044325549548943854 VAVLGASGGIGQPLSLLLK Unmodified 1792.0822 0.082220072 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 6.33 0.471 2 1 67.39 67.433 3 4.4043E-31 20408 20230619_1886_Aki_TMTPro18x_K_F6 222.64 203.37 417410 367200 410440 492120 393100 441680 476850 481420 454250 513800 564320 583560 531730 479440 562900 530630 576870 665340 386080 337090 417790 485950 411830 451300 475440 490100 468580 519370 572690 585600 545330 500770 572460 540050 552420 630190 2 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 812610000 28339 297 26616 53253;53254;53255 42985;42986;42987 42985 3 9606 Homo sapiens 0.2178622507669843 VAVLSQNR Unmodified 885.50321 0.50321468 2058 A8K4W5;Q59GW6;Q9BWD1;Q9BWD1-2 ACAT2 Acetyl-CoA acetyltransferase, cytosolic yes no 0 0 0 1.5 0.5 1 1 40.035 40.07 2 0.002466 9825 20230619_1881_Aki_TMTPro18x_K_F2 126.28 100.88 282810 215440 237250 238940 310820 406550 274100 280510 489440 101730 105960 105940 115290 91530 140960 121580 120910 101380 261050 197510 245970 241530 317130 395300 284800 290410 469880 113460 127170 107080 118730 96473 141660 120640 115750 96581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265830000 28340 2058 26617 53256;53257 42988 42988 1 9606 Homo sapiens 0.05588320474566899 VAVLVKPEHENR Unmodified 1389.7728 0.7728476 3241 O15357;O15357-2 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 yes no 0 0 1 7.5 0.5 2 2 40 40.027 3;4 0.00033931 9496 20230619_1888_Aki_TMTPro18x_K_F8 96.551 74.994 196810 161310 187520 191630 316730 248520 247450 194430 316190 132390 149540 118760 146960 108270 139290 136460 146020 137910 181920 147940 193110 191770 316230 246030 255310 200870 311080 137170 160950 121030 149680 113620 142130 136770 139590 131000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112800000 28341 3241 26618 53258;53259;53260;53261 42989;42990 42990 2 9606 Homo sapiens 0.09355209300269962 VAVQGDVVR Unmodified 941.52943 0.52942943 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 4.5 0.5 1 1 39.573 39.639 2 0.00010698 9347 20230619_1885_Aki_TMTPro18x_K_F5 154.49 86.067 255770 200430 226510 253740 318530 319390 279260 280360 356940 235080 276420 268980 243650 217220 280980 254700 317320 252390 236220 183960 234030 252660 322470 317140 286150 287900 355620 241290 285980 269870 251650 227680 286900 255330 302810 239980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 490490000 28342 3402 26619 53262;53263 42991;42992 42992 2 9606 Homo sapiens 0.05632589646052111 VAVTEGCQPSR Unmodified 1202.5714 0.5713706 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 3.5 0.5 1 1 35.832 35.884 2 8.5953E-06 7785 20230619_1883_Aki_TMTPro18x_K_F4 150.61 124.22 44743 25569 50376 53916 60064 62111 56813 67893 64687 57915 80615 86277 83098 75197 66615 46591 104820 94917 41338 23664 50867 52183 61491 62268 57762 68667 66045 59921 82087 85858 84004 76461 70010 50058 99851 89677 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 60161000 28343 3299 26620 53264;53265 42993;42994 42993 2 9606 Homo sapiens -0.021812227277450802 VAVTSSSSSSSSSSSIPSAEK Unmodified 1970.928 0.92802343 1541 J3KSW8;U6FSN9;A0A494BZV2;Q6WCQ1-3;Q6WCQ1;Q6WCQ1-2 MPRIP;Mprip-Ntrk1 fusion gene Tyrosine-protein kinase receptor;Myosin phosphatase Rho-interacting protein yes no 0 0 0 7 0 1 43.833 43.915 3 3.501E-05 10852 20230619_1887_Aki_TMTPro18x_K_F7 87.676 71.537 5289 5045.4 5097.1 5733.5 7902.9 6469.6 5659.3 5537.8 7254.1 4667.2 6770.9 7891.4 6228.9 6270.8 7310.9 6397.4 10048 5541.5 4894.2 4622.8 5236 5743.2 7912.1 6472.5 5885.2 5702.1 7271.8 4866.9 6956 7808.8 6436.9 6518.9 7558.9 6384.3 9555.8 5288.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10762000 28344 1541 26621 53266 42995 42995 1 9606 Homo sapiens -0.018603457279141367 VAVVAGYGDVGK Unmodified 1133.6081 0.60807369 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 0 7.5 0.5 2 2 51.988 52.064 2;3 2.1819E-07 14377 20230619_1888_Aki_TMTPro18x_K_F8 136.48 114.39 358200 300110 354410 344480 336180 322450 378960 323600 384130 473430 463560 489360 503720 440460 431790 554610 488200 486130 331240 275130 359940 344120 351320 328050 379830 334750 394690 470780 473800 494360 509490 461820 444140 551340 466540 462460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3793699999.9999995 28345 1439 26622 53267;53268;53269;53270 42996;42997 42997 2 9606 Homo sapiens 0.04661397160475644 VAVVCSSNQNR Unmodified 1232.5932 0.59316868 2545 B4DMK6;Q9NP77;Q9NP77-2 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 yes no 0 0 0 8 0 1 35.665 35.654 2 0.01197 7753 20230619_1888_Aki_TMTPro18x_K_F8 79.986 62.121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28346 2545 26623 53271 42998 42998 1 9606 Homo sapiens -0.013824179791981805 VAVVGNVDAGK Unmodified 1027.5662 0.56620887 155 A0A024R1S5;O00178;B2RDW9;F5H716 GTPBP1 GTP-binding protein 1 yes no 0 0 0 6 0 1 47.181 47.261 2 0.0036608 12693 20230619_1886_Aki_TMTPro18x_K_F6 111.61 40.227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28347 155 26624 53272 42999 42999 1 9606 Homo sapiens 0.05352841471949432 VAVVNQIAR Unmodified 968.57671 0.57671398 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 44.883 44.924 2 0.002726 12077 20230619_1881_Aki_TMTPro18x_K_F2 103.75 50.397 393960 300040 317000 330700 472390 619090 485080 451420 712570 203870 209790 225710 254850 190790 277660 243540 255390 202950 363540 275060 331060 335160 480110 599960 494630 466020 691350 221180 241060 227210 259840 200780 280490 241760 244210 193380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271540000 28348 2337;3778;3779 26625 53273;53274 43000 43000 1 9606 Homo sapiens 0.09116868917044485 VAVVQYSGTGQQRPER Unmodified 1773.9122 0.91219463 883 Q8TBN2;A0A087X0S5;A0A384P5H7;P12109;A0A804HJ28 COL6A1 Collagen alpha-1(VI) chain yes no 0 0 1 1 0 1 37.907 37.907 3 1.6961E-14 9184 20230619_1880_Aki_TMTPro18x_K_F1 181.26 141.24 22065 15798 16821 24718 23627 27615 32843 30574 31245 26194 33855 43991 28373 27755 37078 29835 36194 41926 20347 14541 17688 24247 24260 27752 32506 30927 31985 27236 34464 43262 29569 29261 37463 30647 34679 39672 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68994000 28349 883 26626 53275 43001 43001 1 9606 Homo sapiens 0.05619502126955922 VAVYVPGSK Unmodified 918.51747 0.51746776 4468 Q9BY44-3;Q9BY44;F8WAE5;Q9BY44-4;C9IZE1 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 2 0 1 50.149 50.201 3 0.013009 14535 20230619_1881_Aki_TMTPro18x_K_F2 67.897 38.424 62525 55345 58516 58512 64343 70923 72869 62096 76204 82837 80263 82878 87084 71971 72075 102950 85260 89647 57814 50690 59872 59020 66599 70604 73058 64622 77659 82608 82467 83787 87946 76228 74458 102120 81479 85272 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 195660000 28350 4468 26627 53276 43002 43002 1 9606 Homo sapiens 0.054949729028635375 VAYIPDEMAAQQNPLQQPR Unmodified 2168.0684 0.068437276 3211 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 0 0 6.33 0.471 2 1 58.403 58.464 3 1.816E-31 17456 20230619_1886_Aki_TMTPro18x_K_F6 234.57 203.6 22893 17486 22002 20500 17821 25917 22732 24452 25866 24697 25217 26322 28111 26905 26563 32007 32430 34161 21153 16039 22360 20535 19027 25747 22745 25078 26147 25002 26042 26680 28554 27994 27393 32185 30984 32417 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295850000 28351 3211 26628 53277;53278;53279 43003;43004 43003 2 9606 Homo sapiens 0.0311257951530024 VAYIPDEMAAQQNPLQQPR Oxidation (M) 2184.0634 0.063351898 3211 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 yes yes 0 1 0 6 0 1 53.603 53.68 3 5.8251E-07 15475 20230619_1886_Aki_TMTPro18x_K_F6 106.35 96.984 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28352 3211 26628 53280 43005 43005 1890 1 9606 Homo sapiens 0.018682756527141464 VAYPQADSNLR Unmodified 1232.6149 0.61494998 4278 Q8WUM0;B4E206;B4E3T7;A0A024R3R6 NUP133 Nuclear pore complex protein Nup133 yes no 0 0 0 5.5 0.5 1 1 42.378 42.461 2 6.9958E-09 10537 20230619_1885_Aki_TMTPro18x_K_F5 219.8 179.74 52063 44018 51711 59489 58397 60645 60615 61918 72719 67956 74780 72779 83166 63995 61616 78081 79674 76703 48149 40419 52704 58807 60171 61268 61369 63333 73476 68508 76953 73392 83555 67074 64119 78114 76036 72878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47265000 28353 4278 26629 53281;53282 43006;43007 43006 2 9606 Homo sapiens 0.007947100410319763 VAYVSFGPHAGK Unmodified 1231.635 0.63495714 1898 E7EPB3;A0PJ62;B7Z6S8;A8K7N0;Q6IPH7;P50914 RPL14 60S ribosomal protein L14 yes no 0 0 0 4.5 1.12 1 1 1 1 47.269 47.338 3 9.1937E-10 12959 20230619_1882_Aki_TMTPro18x_K_F3 151.98 117.9 409620 330630 355200 404460 403320 485580 419880 420270 426930 332420 376160 352000 374200 278620 336530 385140 413250 401930 378310 303330 366420 403370 415970 483240 422630 431550 432220 341390 388100 354280 380010 295670 347370 386080 394570 381620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 680540000 28354 1898 26630 53283;53284;53285;53286 43008;43009 43008 2 9606 Homo sapiens 0.028405057716327065 VCACHLCGGR Unmodified 1188.4951 0.49505131 809 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 0 0 0 4.5 3.5 1 1 31.801 31.804 3 1.1801E-05 6733 20230619_1880_Aki_TMTPro18x_K_F1 149.19 143.58 60007 39661 61226 55060 60790 60733 60872 65672 78623 56726 59030 50161 59181 46989 59498 65166 67466 47006 55430 36466 62036 54431 63154 61096 61939 66486 78249 57645 61439 51183 60410 49527 60959 64169 64332 44914 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54048000 28355 809 26631 53287;53288 43010;43011 43010 2 9606 Homo sapiens -0.09165641100366884 VCADLIR Unmodified 845.44292 0.44292261 3681 P60866;P60866-2;A0A7P0S5H5;E5RJX2 RPS20 40S ribosomal protein S20 yes no 0 0 0 6.5 1.12 1 1 1 1 45.221 45.291 2 0.0057929 11766 20230619_1885_Aki_TMTPro18x_K_F5 138.07 65.036 1005100 839670 880310 907410 1021700 1163100 1131700 1068600 1354100 719030 671800 556030 599860 523200 795640 784260 748410 546560 928510 769360 907080 914520 1053900 1154600 1140700 1088900 1337600 741790 717940 571800 624300 554280 802890 770730 715130 522380 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3705599999.9999995 28356 3681 26632 53289;53290;53291;53292 43012;43013;43014 43012 3 9606 Homo sapiens 0.014018868198377277 VCALLSCTSHK Unmodified 1274.6111 0.61112693 435 A0A024R7A8;P15121 AKR1B1 Aldose reductase yes no 0 0 0 4 0.816 1 1 1 48.02 48.085 3 5.9398E-09 13253 20230619_1882_Aki_TMTPro18x_K_F3 171.55 148.06 367830 300790 331750 346160 332450 406390 340210 327140 361890 329140 329000 280450 311770 269870 312190 296780 345430 336600 339840 275780 340110 346660 345870 404520 343330 339790 366130 331210 338080 286680 318840 280280 319180 300100 330120 319310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2135699999.9999998 28357 435 26633 53293;53294;53295 43015 43015 1 9606 Homo sapiens -0.015194190486909065 VCASEKPPK Unmodified 1014.5168 0.51681584 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 1 8 0 1 37.82 37.806 3 0.0031237 8579 20230619_1888_Aki_TMTPro18x_K_F8 88.496 60.634 63727 30336 78535 79296 127970 139380 92953 130850 89267 64182 119140 145720 92472 108620 119530 37845 149390 132380 58886 28221 79291 76743 127990 136040 95765 132350 92198 70891 119900 142800 96727 109470 122240 44748 142530 124800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49701000 28358 1213 26634 53296 43016 43016 1 9606 Homo sapiens 0.010138101915003972 VCASERPPK Unmodified 1042.523 0.52296385 975 A0A7P0TAP9;A0A0A6YZ17;Q92995;Q92995-2;A0A7P0T949 USP13 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 13 yes no 0 0 1 7 0 1 34.055 34.136 3 0.052917 6991 20230619_1887_Aki_TMTPro18x_K_F7 52.725 35.4 33314 21931 46687 48637 60965 56899 49833 51167 52546 41316 69469 70105 58236 59734 53162 36273 78113 67658 30869 20301 46526 46977 61772 56754 51005 52423 53976 43178 69983 69484 59633 60699 55421 38653 74425 63967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11610000 28359 975 26635 53297 43017 43017 1 9606 Homo sapiens 0.003403284230216741 VCASVTFK Unmodified 910.45824 0.45823833 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;P55060-2 CSE1L Exportin-2 yes no 0 0 0 2 0 1 49.083 49.149 2 0.0073433 14087 20230619_1881_Aki_TMTPro18x_K_F2 107.9 74.954 176840 147780 145630 172650 168650 191070 207270 189900 195370 184600 209380 224050 227660 178720 171460 260980 271620 248490 163300 135500 151080 172560 174430 191790 206310 194010 200220 188020 215020 224260 229120 190210 181350 259950 258750 236240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177930000 28360 1462 26636 53298 43018 43018 1 9606 Homo sapiens -0.0005724638297124329 VCCEGMLIQLR Unmodified 1377.6567 0.65669691 4319 Q96A33;Q96A33-2 CCDC47 Coiled-coil domain-containing protein 47 yes no 0 0 0 8 0 1 56.104 56.163 2 0.0015553 16213 20230619_1888_Aki_TMTPro18x_K_F8 121.73 113.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28361 4319 26637 53299 43019 43019 1 9606 Homo sapiens -0.017025168579266392 VCDEPHPLLVK Unmodified 1305.6751 0.67510739 2664 Q75MT5;B5BUD2;P35250-2;P35250;A0A087WVY3;H7C5P4;H7C596 RFC2 Replication factor C subunit 2 yes no 0 0 0 5.5 0.5 1 1 46.768 46.848 3 3.5611E-05 12390 20230619_1885_Aki_TMTPro18x_K_F5 135.66 97.028 501380 391320 464470 505190 531860 602480 568970 559130 702180 634780 709860 729900 734160 594670 616120 735880 787370 785340 463200 359250 476210 502030 548500 600770 575590 576230 707890 640510 729000 732130 742860 625500 638690 739620 751680 745410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 410790000 28362 2664 26638 53300;53301 43020 43020 1 9606 Homo sapiens 0.034496843798933696 VCDIAAELAR Unmodified 1116.5597 0.55974328 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;E7EQT5;E7ETV3;E7EV12;H0Y3V4 IPO5;RANBP5 Importin-5 yes no 0 0 0 5.5 0.5 1 1 55.75 55.82 2 3.4689E-05 16145 20230619_1885_Aki_TMTPro18x_K_F5 152.86 93.877 174650 129130 153490 159640 121480 148000 159700 140800 158070 229040 198520 199640 250720 205370 175840 291350 257020 304940 161240 118520 157250 158580 129870 150380 158810 146770 163120 225770 204000 204290 250690 216320 185260 291750 245460 289310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153240000 28363 782 26639 53302;53303 43021 43021 1 9606 Homo sapiens 0.006125802489123089 VCEAGSGLVFSCQDK Unmodified 1655.7283 0.72834153 3407 P08138-2;P08138 NGFR Tumor necrosis factor receptor superfamily member 16 yes no 0 0 0 5.5 0.5 1 1 53.362 53.437 3 0.00047548 15397 20230619_1886_Aki_TMTPro18x_K_F6 86.413 73.58 69058 60594 62779 77786 107470 122900 77459 79393 98802 90080 87731 101180 105670 92492 90590 119290 115930 142450 63836 55602 65056 77656 107380 119840 80483 84378 99075 90875 91403 101920 106620 97140 93949 120640 110860 134960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133100000 28364 3407 26640 53304;53305 43022 43022 1 9606 Homo sapiens -0.07329350690361025 VCEDLDTSVNLAWTSGTNCTR Unmodified 2398.0529 0.052923146 62 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;P45880-2;P45880-1;B4DKM5 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 5 0 1 60.697 60.747 3 3.1516999999999996E-126 18191 20230619_1885_Aki_TMTPro18x_K_F5 310.55 303.13 16546 14834 18098 16194 18218 20072 20073 18992 23377 18380 18132 13389 19500 14435 13167 18295 16720 15393 15321 13590 18247 16305 18961 19982 20231 19457 23408 18471 18869 13876 19547 15071 13724 18146 15954 14656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94079000 28365 62 26641 53306 43023 43023 1 9606 Homo sapiens -0.09018119854727047 VCEEIAIIPSK Unmodified 1257.6639 0.663874 3066 H3BNC9;P08708;H0YN88;A0A075B716;H0YN73 RPS17 40S ribosomal protein S17 yes no 0 0 0 5 0 1 57.339 57.398 3 0.024328 16885 20230619_1885_Aki_TMTPro18x_K_F5 57.836 38.049 22559 22443 24608 26797 24049 25980 24625 24830 32498 26601 25058 26585 25843 22371 35683 25165 26090 26570 20904 20570 24830 26695 25043 26314 25042 25501 32356 26801 26127 26834 26814 23364 35523 25359 25059 25219 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34480000 28366 3066 26642 53307 43024 43024 1 9606 Homo sapiens 0.045348622857545706 VCEIHFHEINNK Unmodified 1538.73 0.72999651 1613 B4DHE8;A0A6Q8PF05;Q96DH6-2;Q96DH6;B4DM51;Q96DH6-3;A0A6Q8PGD8;H0YHB7;O43347 MSI2;MSI1 RNA-binding protein Musashi homolog 2;RNA-binding protein Musashi homolog 1 yes no 0 0 0 6 0.816 1 1 1 42.588 42.672 4 1.8746E-07 10339 20230619_1887_Aki_TMTPro18x_K_F7 165.35 142.82 409280 372360 343650 323810 421070 681420 488100 429210 670270 236650 229130 243590 269820 218470 218290 261970 240090 281320 378210 340490 355960 335810 435250 655710 493210 450660 653500 250880 257670 246290 271810 228580 224340 263510 229790 266840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 669590000 28367 1613 26643 53308;53309;53310 43025;43026 43026 2 9606 Homo sapiens -0.01781928819445966 VCENIPIVLCGNK Unmodified 1514.7585 0.75851945 2668 B5MDF5;P62826;J3KQE5;F5H018;B4DV51 RAN GTP-binding nuclear protein Ran yes no 0 0 0 3.67 3.09 1 1 1 58.214 58.235 2;3 8.3755E-11 17739 20230619_1880_Aki_TMTPro18x_K_F1 171.32 152.91 905400 798310 899030 821390 754310 883410 982960 854260 988720 1106700 951390 951040 1299100 940630 894960 1390000 1264000 1122200 837560 731010 911270 829150 801250 888300 977990 881720 1006600 1100200 992820 972780 1295000 994920 940190 1373000 1204800 1069200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8874400000 28368 2668 26644 53311;53312;53313 43027;43028 43027 2 9606 Homo sapiens 0.021730527654653997 VCEPCYEQLNR Unmodified 1466.6282 0.62823356 1103 O14964;A0A7I2V3F9;A0A7I2V5A3;A0A7I2V3Z1;A0A7I2V6E0;A0A7I2V2K2;A0A7I2V5A2;A0A7I2V3I8;A0A7I2V2D8;A0A7I2V2W5;A0A7I2V2R9;A0A7I2V3J3;A0A0S2Z4R4;A0A7I2V637;B4E1E2;A0A0S2Z4Q4;O14964-2;A0A7I2YQD1;I3L1P5;B4DFP5;A0A7I2V5N3;A0A7I2V5W6 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 3.5 0.5 1 1 43.814 43.871 2 0.00028924 11323 20230619_1882_Aki_TMTPro18x_K_F3 121.5 113.58 58527 59484 73377 75236 93744 65066 86651 67734 49948 77209 91115 51205 53293 40735 113870 41805 44843 44100 54314 54549 73579 74563 95115 66746 86661 69333 54681 76650 89754 52881 58327 42476 110520 42362 43567 41865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93037000 28369 1103 26645 53314;53315 43029 43029 1 9606 Homo sapiens -0.08641543233534321 VCEPCYEQLNRK Unmodified 1594.7232 0.72319657 1103 O14964;A0A7I2V3F9;A0A7I2V5A3;A0A7I2V3Z1;A0A7I2V6E0;A0A7I2V2K2;A0A7I2V5A2;A0A7I2V3I8;A0A7I2V2D8;A0A7I2V2W5;A0A7I2V2R9;A0A7I2V3J3;A0A0S2Z4R4;A0A7I2V637;B4E1E2;A0A0S2Z4Q4;O14964-2;A0A7I2YQD1;I3L1P5 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 1 6.5 0.5 1 1 42.697 42.782 3 4.2612E-07 10425 20230619_1887_Aki_TMTPro18x_K_F7 156.36 129.39 37811 31549 36368 46593 35867 41637 36221 45223 46921 50181 50190 51043 60283 42203 33734 69750 73644 63044 34956 29000 37115 45727 37343 42543 36868 46071 47361 50456 51745 51524 59928 45314 37166 69152 70003 59990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71020000 28370 1103 26646 53316;53317 43030 43030 1 9606 Homo sapiens -0.050376097623484384 VCEVCSAYLGLHDNDRR Unmodified 2062.9313 0.93129187 4715;4568 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1;Q9NQ29-3;Q9NQ29;A8MYV2;Q1W6G4;Q9NQ29-2;D3DU41;B8ZZ10 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 no no 0 0 1 5.5 0.5 1 1 44.752 44.835 4 1.1571E-18 11631 20230619_1886_Aki_TMTPro18x_K_F6 149.59 132.51 222900 146130 238580 207160 246440 261180 249740 252130 233920 252010 228980 259670 271880 235970 243690 238670 310280 274200 205980 134390 240960 204940 255220 259750 251240 258130 239270 254860 237310 262280 274890 244380 251910 241840 295980 260200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1097600000 28371 4715;4568 26647 53318;53319 43031;43032 43031 2 9606 Homo sapiens -0.05765652635955121 VCFAQHTPSLPAESPR Unmodified 1795.8676 0.86755262 2438 B3KXK0;E9PE15;P51790-4;P51790-5;P51790;P51790-2 CLCN3 Chloride channel protein;H(+)/Cl(-) exchange transporter 3 yes no 0 0 0 8 0 1 45.813 45.851 3 0.00066633 11826 20230619_1888_Aki_TMTPro18x_K_F8 82.663 69.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28372 2438 26648 53320 43033 43033 1 9606 Homo sapiens 0.0014535498930854374 VCFGMLPK Oxidation (M) 966.46669 0.46669452 3131 Q9Y3E5;J3KQ48;Q96ME4 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial yes no 0 1 0 3 0 1 53.632 53.684 3 0.044056 15821 20230619_1882_Aki_TMTPro18x_K_F3 49.358 33.134 61338 48227 52378 54077 56567 58815 61794 59549 63561 48825 42980 38617 50084 40506 49705 55398 51579 48261 56635 44213 54023 54217 58550 59152 62044 60500 63816 49636 45368 39780 50873 42520 50683 55014 49309 45926 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27419000 28373 3131 26649 53321 43034 43034 1819 1 9606 Homo sapiens -0.017880157380091077 VCFVGDGFTR Unmodified 1156.5335 0.53352853 3357 Q5J7U2;O95478;A0A0A0MQZ6;H0YAI9 CDK105;NSA2 Ribosome biogenesis protein NSA2 homolog yes no 0 0 0 8 0 1 53.16 53.234 2 2.9539E-23 14949 20230619_1888_Aki_TMTPro18x_K_F8 209.19 192.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28374 3357 26650 53322 43035 43035 1 9606 Homo sapiens -0.03847688922564885 VCLLGCGISTGYGAAVNTAK Unmodified 2010.9867 0.98668148 3436 Q6IRT1;Q6FI45;P11766;Q5U043;H0YAG8 ADH5 S-(hydroxymethyl)glutathione dehydrogenase;Alcohol dehydrogenase class-3 yes no 0 0 0 4 0.816 1 1 1 60.817 60.844 3 6.065E-55 18651 20230619_1883_Aki_TMTPro18x_K_F4 277 250.53 88676 73088 72382 82560 93614 114050 93249 88464 118870 102500 104910 107490 113100 99837 101800 122410 121250 128600 81875 66998 75282 82995 95717 112340 94792 92514 119070 103060 108660 108660 114690 104430 104900 122930 115880 122050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 285120000 28375 3436 26651 53323;53324;53325 43036 43036 1 9606 Homo sapiens 0.02162760831856758 VCMDFNIIR Oxidation (M) 1182.5525 0.55254942 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;A0A804HK69;A0A804HKU1;A0A804HIG2 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 1 0 7.5 0.5 1 1 52.464 52.537 2 0.0083916 14733 20230619_1887_Aki_TMTPro18x_K_F7 83.313 62.557 54313 44274 52654 51585 59529 65123 61048 61175 72874 45910 44144 42249 43807 37940 55370 40629 46874 37076 50208 40598 53724 51688 61343 64737 61814 62350 72353 47157 46648 42918 45280 39416 55545 40644 44863 35288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119500000 28376 1736 26652 53326;53327 43037 43037 1138 1 9606 Homo sapiens -0.03142475623167229 VCNEVVDTCLYK Unmodified 1498.6796 0.67960042 389 B5BUD5;B2R8E4;A0A024R6A5;P35813;P35813-3;P35813-2 PPM1A Protein phosphatase 1A yes no 0 0 0 5 0 1 53.77 53.839 3 7.878E-05 15386 20230619_1885_Aki_TMTPro18x_K_F5 95.417 82.65 52063 56117 63897 68663 62691 73703 78965 78502 94578 90918 89757 92034 93977 76962 85466 103600 105280 124030 48327 51435 63956 68387 65663 74247 79149 80190 95275 91250 92516 92880 95381 81351 88258 104750 100670 117520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116880000 28377 389 26653 53328 43038 43038 1 9606 Homo sapiens -0.04979219259485035 VCNFLASQVPFPSR Unmodified 1620.8082 0.80824683 1085 A0A0S2Z410;Q99714;Q99714-2 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 5.5 0.5 2 2 62.002 62.052 2;3 4.0947999999999997E-22 18793 20230619_1885_Aki_TMTPro18x_K_F5 223.39 209.65 339950 262760 301780 353400 306800 376530 381200 383640 420420 401740 363150 343120 399450 342630 343080 443050 398100 427050 313950 241350 310210 349660 320660 378980 381210 391870 423890 403310 376740 351160 403950 358810 353470 442400 380570 405680 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1276700000 28378 1085 26654 53329;53330;53331;53332 43039;43040;43041 43039 3 9606 Homo sapiens 0.02267503765733636 VCNPIITK Unmodified 943.51609 0.51608756 3430 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;E9PNE6;B4E1Q1;A8K7Q2;Q96BE0;E9PS65;Q96H53;Q9NZ87;Q9NWW3 HSPA8;HEL-S-72p Heat shock cognate 71 kDa protein yes no 0 0 0 2 0.816 1 1 1 48.528 48.576 2 0.0006468 13777 20230619_1880_Aki_TMTPro18x_K_F1 176.84 102.86 992110 805720 860490 988710 1011300 1100700 1016800 1000200 1258400 1136800 1101400 930560 1228200 908030 971700 1375600 1224900 957500 916330 739210 888070 984770 1039200 1102400 1032200 1032400 1262200 1135800 1141600 954590 1236700 962290 1008700 1350300 1167600 914850 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7091299999.999999 28379 3430 26655 53333;53334;53335 43042;43043;43044 43042 3 9606 Homo sapiens 0.042070155424539735 VCNRNEYLDGR Unmodified 1394.6361 0.63609612 2779 CON__P06868 yes yes 0 0 1 5 0 1 34.541 34.628 3 0.011433 7404 20230619_1885_Aki_TMTPro18x_K_F5 70.685 52.373 + 9794.6 11227 12587 18153 25331 16128 20422 21831 22674 12311 17173 17372 12641 12428 17260 12234 15805 15602 9100.8 10322 12768 17725 25068 16613 20934 21656 22715 13112 17690 17243 13278 12966 17362 12504 15135 14784 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13643000 28380 2779 26656 53336 43045 43045 1 9606 Homo sapiens -0.045436479217642045 VCNYGLTFTQK Unmodified 1329.6387 0.63872189 4704 Q9Y277;Q9Y277-2;E5RFP6;E5RJN6;E5RHZ6;E5RHE1;E5RK27 VDAC3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 3 0.816 1 1 1 54.892 54.919 3 5.805E-07 16312 20230619_1882_Aki_TMTPro18x_K_F3 165.39 142.27 558580 457920 594590 605090 629620 692710 691510 667260 671870 545350 507820 416920 586140 453360 506710 559180 482110 377920 516780 420420 601650 600110 652540 693110 692990 680170 678930 554050 531650 430880 591640 472090 515550 550050 460800 361250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1570299999.9999998 28381 4704 26657 53337;53338;53339 43046;43047 43047 2 9606 Homo sapiens -0.01291192516805495 VCNYVNWIQQTIAAN Unmodified 1792.8567 0.85665359 2772 CON__P00761 yes yes 0 0 0 4 0 1 66.577 66.59 3 0.00078051 21039 20230619_1883_Aki_TMTPro18x_K_F4 85.554 77.377 + 2250.8 1140.5 2546.8 1876.3 1648.5 2159.3 3189.9 1932 3266.6 3060.8 3200.6 3157.5 2391.2 2064 2474.2 2003.6 3997.2 3415.5 2078.6 1052.3 2546.3 1838.6 1825.6 2155.2 3126.3 2023 3317.9 3036.4 3251.4 3160.1 2472.2 2164.4 2595.4 2094.7 3805.8 3231.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3275100 28382 2772 26658 53340 43048 43048 1 -0.008060473849809568 VCPPHLK Unmodified 849.45309 0.45309337 349;3906 Q14980-2;A0A024R5M9;Q59HB8;Q7Z757;H0YFY6;Q96HN5;Q14980-5;Q9UNL7;Q4LE64;Q14980 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 1.5 0.5 1 1 40.774 40.811 3 0.0032925 10214 20230619_1881_Aki_TMTPro18x_K_F2 116.35 82.557 288030 246430 257150 267070 321600 327070 320600 290470 360910 276100 249150 254250 327510 254430 246110 345580 359450 299690 266180 225780 264800 268880 328800 325500 324380 298940 360900 279390 264310 259290 327940 267340 258460 342940 342410 285350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 275830000 28383 349;3906 26659 53341;53342 43049;43050 43050 2 9606 Homo sapiens 0.02234494545052712 VCPQIDADNATDNK Unmodified 1559.6886 0.68858521 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9;H0YIM7 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 0 0 2 0 1 45.251 45.332 3 0.00024194 12291 20230619_1881_Aki_TMTPro18x_K_F2 93.859 73.396 45826 37578 47953 48458 52926 59773 48254 49481 65165 50619 62268 60767 58087 52707 52169 59805 70755 75186 42391 34492 48609 48183 54491 59341 49461 51293 65257 51447 63818 60978 59180 55015 54221 60818 67549 71232 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59647000 28384 4170 26660 53343 43051 43051 1 9606 Homo sapiens -0.06887154369474047 VCPTTETIYNDEFYTK Unmodified 1979.8823 0.88225921 1889 A1LT96;A0AVT1;B3KSS1;A0AVT1-2;H0Y8S8 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 0 5 0 1 57.811 57.87 3 2.3785E-11 17023 20230619_1885_Aki_TMTPro18x_K_F5 160.87 142.5 40761 32706 40503 40579 37316 48366 48772 41395 42468 53521 46830 44636 61802 46068 48987 65051 57376 63232 37684 30011 41134 40435 39349 48141 48311 43107 43868 53163 48486 45798 61953 48520 50592 64907 54856 60056 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56745000 28385 1889 26661 53344 43052 43052 1 9606 Homo sapiens -0.06848662443871945 VCQGIGMVNR Oxidation (M) 1148.543 0.54304736 737 A0A024RCX8;Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase-like 1 yes no 0 1 0 1 0 1 38.222 38.222 2 0.046397 9302 20230619_1880_Aki_TMTPro18x_K_F1 63.961 59.02 86092 67827 88190 94803 97517 107830 102890 110350 122700 64448 65810 54149 55879 46979 81206 59289 74487 53615 79604 62321 89598 93677 100710 108070 104030 111310 121420 67370 69742 55276 58575 49353 81629 59141 71189 51060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76893000 28386 737 26662 53345 43053 43053 445 1 9606 Homo sapiens -0.025282439086822706 VCQGIGMVNR Unmodified 1132.5481 0.54813274 737 A0A024RCX8;Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase-like 1 yes no 0 0 0 2 0 1 42.863 42.944 2 1.1947E-06 11198 20230619_1881_Aki_TMTPro18x_K_F2 176.84 151.89 150020 125910 132540 156040 169230 180400 170360 167600 219610 150860 149190 126280 157590 126520 140580 161300 177750 152390 138600 115510 136790 155400 172970 180290 173130 171650 217960 152790 156580 129460 159800 132390 145410 160980 169530 144920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83931000 28387 737 26662 53346 43054 43054 1 9606 Homo sapiens -0.012839400460507022 VCSTNDLK Unmodified 935.43823 0.43823117 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 5.5 0.5 1 1 41.198 41.288 2 6.3577E-05 10075 20230619_1885_Aki_TMTPro18x_K_F5 185.55 138.98 67592 30711 77652 78472 103350 116250 80984 107290 91298 62802 108270 135480 95170 98495 99140 49343 157480 138570 62404 28564 78430 75722 104720 114350 83372 108970 92956 68068 109910 132830 97912 100230 103660 55537 149980 130740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93686000 28388 261 26663 53347;53348 43055 43055 1 9606 Homo sapiens -0.03207042113592706 VCTLAIIDPGDSDIIR Unmodified 1756.9029 0.90293508 568 A0A024R9D3;P62888;E5RI99;A0A0B4J213;A0A0C4DH44 RPL30 60S ribosomal protein L30 yes no 0 0 0 5 0.816 1 1 1 62.592 62.62 3 1.7329E-14 19284 20230619_1886_Aki_TMTPro18x_K_F6 176.23 157.4 209020 206550 199770 173570 207280 268790 245190 210470 274210 275220 199060 231810 272020 233280 259220 298250 254560 299170 193460 188770 203740 179460 216070 263320 245770 220740 275000 273480 211270 237230 274750 244080 263790 298590 243910 283980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 346430000 28389 568 26664 53349;53350;53351 43056;43057;43058 43058 3 9606 Homo sapiens 0.05475972726458167 VCVEHHTFFR Unmodified 1330.6241 0.62407488 3431;931 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;P11171-5;Q4VB87;A0A994J847;Q29RX4;A0A2R8YCW8;A0A3B3ITP0;P11171-7;A0A2R8Y5Z6;A0A2R8Y7Y3;A0A2R8Y5G2;P11171-6;A0A2R8Y570;A0A2R8Y420;A0A3B3IU06;A0A2R8YFR9;A0A2R8Y6G5;A0A3B3IUD6;A0A2R8Y7N0;A0A2R8Y6D0;A0A1B0GWG0;A0A2R8Y4N6;Q9Y2J2;Q9Y2J2-2;A0A0A0MSA4;A0A0A0MRA8;A8K968;B3KY28;Q9Y2J2-4;J3KT37;A0A1B0GTF8;B2RB02;Q9Y2J2-3 EPB41;EPB41L3 Protein 4.1;Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 8 0 1 38.696 38.682 4 0.00080216 8945 20230619_1888_Aki_TMTPro18x_K_F8 83.869 73.32 35419 28090 33172 34196 42378 32885 35492 38749 41671 34032 41217 45301 36106 32421 38182 41424 44345 43404 32727 25772 34007 34030 43008 33528 36391 39054 42061 34983 42119 45042 37131 34327 39148 41585 42363 41207 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28230000 28390 3431;931 26665 53352 43059 43059 1 9606 Homo sapiens -0.028012198742771943 VCVETVESGAMTK Unmodified 1409.6531 0.65305132 3600 Q53GL5;P48735;P48735-2;Q13584;B4DSZ6 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] yes no 0 0 0 5 0 1 50.833 50.908 3 3.113E-09 14142 20230619_1885_Aki_TMTPro18x_K_F5 169.23 151.42 373990 302870 356650 394530 374200 420470 443390 427960 485900 526760 540840 597490 559550 535210 479420 581260 590760 709270 345660 278040 364290 391210 389230 423340 444360 439390 495010 529140 553470 601000 567160 556490 495660 590220 564980 671880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 262920000 28391 3600 26666 53353 43060;43061 43061 2 9606 Homo sapiens -0.03538908150835596 VCVIDEIGK Unmodified 1031.5321 0.53213155 4063 Q5TDE9;Q9BSD7;Q5TDF0 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase yes no 0 0 0 5.5 0.5 1 1 55.183 55.255 3 0.00049553 15928 20230619_1885_Aki_TMTPro18x_K_F5 112.84 55.243 63663 44337 61577 64580 55699 74626 61962 59558 76373 71004 66109 67198 93844 71144 59061 102890 89030 93689 58796 40779 62666 63653 58620 74301 62566 62204 76614 71078 69493 68595 93224 74972 62566 102230 84926 89067 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64197000 28392 4063 26667 53354;53355 43062 43062 1 9606 Homo sapiens 0.017626769886874172 VCYYYDGDIGNYYYGQGHPMK Oxidation (M) 2578.0569 0.056945892 4305 Q92769;H3BM24;A0A7R6V290 HDAC2 Histone deacetylase 2 yes no 0 1 0 7 0 1 54.792 54.856 3 0.00082529 15694 20230619_1887_Aki_TMTPro18x_K_F7 70.942 63.666 14655 9697.9 11091 15569 9017 11205 13042 11150 13071 22568 16662 25028 26961 24624 12711 39610 35121 41767 13508 8932.4 11561 15169 9654.4 11655 12917 11715 13515 22258 17418 25281 26553 26203 14564 39589 33433 39623 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27942000 28393 4305 26668 53356 43063 43063 2719 1 9606 Homo sapiens -0.16896030360931036 VDAFLGTWK Acetyl (Protein N-term) 1077.5495 0.54949617 1412 S4R3A2;S4R371;A0A384MDY5;P05413 FABP3 Fatty acid-binding protein, heart yes no 1 0 0 7.5 0.5 1 1 66.495 66.516 2 4.4986E-05 20725 20230619_1887_Aki_TMTPro18x_K_F7 100.15 57.285 39154 33735 36108 37834 24925 29590 101930 106560 104050 49259 35805 38380 66360 39412 44324 73281 41027 48151 36194 30917 36855 37871 28807 32273 98238 101920 102940 52523 41307 39604 65623 42461 45441 71595 39336 45974 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49003000 28394 1412 26669 53357;53358 43064;43065 43064 2 9606 Homo sapiens 0.013823405859966442 VDAILCVAGGWAGGNAK Unmodified 1657.8246 0.82462518 1243 A0A140VKA9;P09417;P09417-2;B7Z415;D6RGG7;H0Y8F7 QDPR Dihydropteridine reductase yes no 0 0 0 3.5 0.5 1 1 63.474 63.492 3 6.4725E-14 19892 20230619_1882_Aki_TMTPro18x_K_F3 131.24 119.97 64827 42961 53513 64220 50899 52509 55388 66694 57036 69871 65714 69104 72140 70645 63748 73809 74642 91862 59786 39534 55314 62939 53191 54300 55695 67221 58437 70378 67321 70229 73092 72985 65633 75098 71431 86997 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143020000 28395 1243 26670 53359;53360 43066;43067 43066 2 9606 Homo sapiens 0.022025849318652035 VDALLSAQPK Unmodified 1040.5866 0.58660996 2154 A8KAK1;Q9NYU2-2;Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 1 0 1 54.929 54.929 2 0.015137 16402 20230619_1880_Aki_TMTPro18x_K_F1 72.243 31.054 27398 23773 32188 28005 30384 34836 32960 29422 31003 31176 27859 30286 31009 26589 35799 28555 33620 32741 25380 21796 32249 28035 31757 34585 33028 30485 31591 31389 28908 30641 31777 27662 36156 28924 32182 31056 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15993000 28396 2154 26671 53361 43068 43068 1 9606 Homo sapiens 0.06794012131740601 VDALSPQLQQLACECYSR Unmodified 2136.9932 0.99322342 2064 A8K548;Q8IZL8;C9JFV4;B4DR36;E7EV54;B4DEX7;O15451;I3L4P1 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 0 0 0 8 0 1 61.196 61.229 3 1.1894E-05 18301 20230619_1888_Aki_TMTPro18x_K_F8 96.153 92.712 31136 30344 39708 38689 35775 49551 41144 45752 43967 55447 41592 38831 50391 41984 34733 51801 53674 45544 28891 27833 39573 38530 37668 49164 41287 47223 44626 54997 43136 40280 50422 43738 36730 51498 51116 43354 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28764000 28397 2064 26672 53362 43069 43069 1 9606 Homo sapiens -0.029793460073960887 VDAQFGGIDQR Unmodified 1204.5836 0.58364985 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2;A0A0C4DGZ5;A0A6Q8PFX4 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 3.5 0.5 1 1 46.753 46.813 2 2.7411E-06 12502 20230619_1883_Aki_TMTPro18x_K_F4 163.84 126.36 345360 257200 307750 349610 292170 334190 339140 340460 394740 395020 439670 536520 471580 376740 473210 448240 497850 565000 318880 236310 315780 345200 306220 339180 341050 349000 400790 400470 451130 532440 480180 397850 482400 455890 476560 535160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 507920000 28398 1102 26673 53363;53364 43070;43071 43071 2 9606 Homo sapiens -0.010458629930553798 VDATADYICK Unmodified 1154.5278 0.52777445 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 5 0.816 1 1 1 50.321 50.383 3 7.8589E-05 13893 20230619_1885_Aki_TMTPro18x_K_F5 114.4 74.133 332970 277820 320070 297180 317160 318320 330210 309060 333720 309750 329150 315730 340990 271230 314650 377780 339870 295710 307830 254530 325970 299030 329740 320290 332380 316490 339590 313210 338390 318970 346290 286820 322150 373170 324640 281900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 958170000 28399 161 26674 53365;53366;53367 43072;43073 43072 2 9606 Homo sapiens -0.04330832224900405 VDATEESDLAQQYGVR Unmodified 1779.8275 0.82752153 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;A0A7P0Z4J0;B4DJS0;A0A7P0Z4S2;A0A7P0TAX9;A0A7P0Z476;I3NI03;A0A7P0TBP8;A0A7P0T9S9;B4DNP9;I3L3U6 P4HB Protein disulfide-isomerase yes no 0 0 0 2.5 1.12 1 1 1 1 52.57 52.599 3 6.5220999999999995E-53 15404 20230619_1880_Aki_TMTPro18x_K_F1 306.14 289.61 262680 238990 265970 251090 283310 285970 314720 312650 355310 302320 289510 319870 319790 250300 294270 350630 314370 351740 243080 218860 270070 253260 293530 287310 316720 317240 357000 306630 301700 321570 324110 265890 301120 350610 300850 333940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2746800000 28400 537 26675 53368;53369;53370;53371 43074;43075 43074 2 9606 Homo sapiens -0.031199132002939223 VDAVHADVYR Unmodified 1143.5673 0.5672715 2052 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;Q15003-2 NCAPH Condensin complex subunit 2 yes no 0 0 0 3.5 0.5 1 1 38.799 38.847 3 0.0013658 9077 20230619_1883_Aki_TMTPro18x_K_F4 90.685 65.832 101240 68358 99941 119580 120980 121930 104120 125240 162860 111140 140110 146050 143980 146620 128970 129560 163560 146040 93502 63030 102040 116480 123580 123140 107810 127320 161490 114260 145000 146710 146320 150210 133310 131430 156030 138600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 287460000 28401 2052 26676 53372;53373 43076 43076 1 9606 Homo sapiens 0.001230558408451543 VDAVHLLK Unmodified 893.53345 0.53345218 4096 Q69YJ7;Q9NTZ6;B4DRP9 DKFZp667H197;RBM12 RNA-binding protein 12 yes no 0 0 0 8 0 1 49.53 49.603 3 0.012938 13353 20230619_1888_Aki_TMTPro18x_K_F8 80.239 7.6915 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28402 4096 26677 53374 43077 43077 1 9606 Homo sapiens 0.08242679139766551 VDAVIPPYPR Unmodified 1125.6182 0.61824444 2802 CON__Q3ZBS7 yes yes 0 0 0 7.5 0.5 1 1 52.712 52.785 2 4.5429E-05 14722 20230619_1888_Aki_TMTPro18x_K_F8 147.29 117.93 + 59415 55506 53455 70856 97214 124610 78997 73166 141140 209820 376920 546440 234160 272260 383480 235780 323820 475780 54942 50920 55589 70907 97308 120720 82726 82112 149480 214680 370710 529220 250910 287670 383270 251410 311460 448800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182930000 28403 2802 26678 53375;53376 43078 43078 1 9606 Homo sapiens 0.060460048857066795 VDCDQHSDIAQR Unmodified 1442.6208 0.62083999 1425 A0A8I5KU76;A0A384MEE7;Q9BS26;A0A8I5KW59;A0A8I5KVZ0;A0A8I5KTR3 ERP44 Endoplasmic reticulum resident protein 44 yes no 0 0 0 1.67 0.471 1 2 31.39 31.432 3 2.5384E-18 6214 20230619_1881_Aki_TMTPro18x_K_F2 235.73 187.07 97518 60023 114680 114470 172390 174260 149350 152490 182970 125750 176430 185700 167570 148610 157120 94095 192810 176500 90164 55439 115930 111810 173750 171100 152930 156540 184000 130450 180990 184400 170870 151700 161540 100280 184020 166820 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 312810000 28404 1425 26679 53377;53378;53379 43079;43080;43081;43082 43080 4 9606 Homo sapiens -0.08276559509590697 VDCTAHSDVCSAQGVR Unmodified 1760.757 0.7570159 4089 Q86UY0;Q6EHZ3;Q658S9;Q8NBS9;A0A024QZV0;Q8NBS9-2 TXNDC5;STRF8;DKFZp666I134;hCG_1811539 Thioredoxin domain-containing protein 5 yes no 0 0 0 3.5 0.5 1 1 34.306 34.362 3 1.2312E-42 7296 20230619_1882_Aki_TMTPro18x_K_F3 275.42 265.89 113970 87165 101200 105710 131010 134360 128160 134360 157840 130520 157870 170700 157390 135440 133390 157190 189060 173640 105240 79979 104340 105620 133640 133720 130300 137120 159010 133360 162010 170270 159580 142010 139250 158470 180240 164810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 705360000 28405 4089 26680 53380;53381 43083;43084 43083 2 9606 Homo sapiens -0.09293233061248429 VDCTQHYELCSGNQVR Unmodified 1964.8469 0.84689354 4089 Q86UY0;Q6EHZ3;Q658S9;Q8NBS9;A0A024QZV0;Q8NBS9-2 TXNDC5;STRF8;DKFZp666I134;hCG_1811539 Thioredoxin domain-containing protein 5 yes no 0 0 0 5.33 1.25 1 1 1 39.493 39.56 3 1.2292000000000001E-33 9322 20230619_1883_Aki_TMTPro18x_K_F4 244.05 233.2 102780 82698 92435 95062 85158 102880 111360 113640 111620 125630 131960 124620 137750 113570 117480 144150 143190 150110 94953 75826 94689 95136 89801 103680 110800 115640 114550 126240 134630 126240 139420 119170 121380 144610 136800 142490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 741330000 28406 4089 26681 53382;53383;53384 43085;43086;43087 43085 3 9606 Homo sapiens -0.09693603452660682 VDDFLANEAK Unmodified 1120.5401 0.5400537 3630 P52209-2;P52209;B4E2U0;K7EM49;K7EMN2;K7EPF6 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 3.17 1.07 2 2 1 1 55.641 55.674 2;3 3.6306E-07 16617 20230619_1882_Aki_TMTPro18x_K_F3 152.54 58.23 399180 312910 351180 384860 444000 520100 458160 459450 538820 511230 513270 545690 602600 460640 516140 637420 552980 561490 368640 287120 362410 384470 454670 514170 463530 474810 543490 515030 531920 549650 607750 487410 529080 633100 528790 534080 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1478499999.9999998 28407 3630 26682 53385;53386;53387;53388;53389;53390 43088;43089;43090;43091 43090 4 9606 Homo sapiens -0.01539472490208027 VDDFLRR Unmodified 919.48756 0.48756462 4382 Q96MU7;Q96MU7-2;J3QR07 YTHDC1 YTH domain-containing protein 1 yes no 0 0 1 7 0 1 44.478 44.561 3 0.0063614 11140 20230619_1887_Aki_TMTPro18x_K_F7 105.95 58.88 55650 48314 49870 46997 57739 55831 53118 60083 60937 54183 60608 54533 66657 46891 56619 65463 62184 55114 51433 44223 51225 47739 59188 55931 54098 60894 61620 55083 62416 55145 67296 49632 58104 64883 59394 52483 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35755000 28408 4382 26683 53391 43092 43092 1 9606 Homo sapiens 0.024600339575158614 VDDHLMGK Oxidation (M) 929.42767 0.42766648 3127 Q86Y74;J3KPP4;O95232;Q6PKC2;A8K3C5;B4DJ96;H0YA81 CROP;LUC7L3 Luc7-like protein 3 yes no 0 1 0 4 0 1 37.408 37.452 3 0.0042606 8504 20230619_1883_Aki_TMTPro18x_K_F4 89.355 74.688 129310 101220 131320 133550 163800 164480 142480 153900 182940 153010 185040 172520 170000 154330 154130 170170 203310 174200 119560 92949 133700 132610 166930 163750 146190 157890 184060 155350 188970 173720 173340 160580 159800 170950 193840 165520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115920000 28409 3127 26684 53392 43093 43093 1816 1 9606 Homo sapiens -0.0398702476801418 VDDHLMGK Unmodified 913.43275 0.43275186 3127 Q86Y74;J3KPP4;O95232;Q6PKC2;A8K3C5;B4DJ96;H0YA81 CROP;LUC7L3 Luc7-like protein 3 yes no 0 0 0 4 0 1 42.873 42.917 3 0.0040379 10803 20230619_1883_Aki_TMTPro18x_K_F4 85.676 66.433 251930 152860 191820 230280 237260 249680 236070 250080 307820 277920 313750 295120 305350 245710 233770 348290 343410 311150 232110 140740 200750 226320 243000 250960 240320 256160 309660 279950 320990 297370 308530 260500 245660 345910 327290 296050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200720000 28410 3127 26684 53393 43094 43094 1 9606 Homo sapiens -0.027427209053939805 VDDLLIIEEK Unmodified 1185.6493 0.6492698 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 4 0 1 62.52 62.525 3 0.040595 19436 20230619_1883_Aki_TMTPro18x_K_F4 48.981 17.487 17909 12234 16638 16142 15856 20546 25410 20566 24080 22441 20504 18984 29394 21584 25258 19697 20111 26598 16533 11241 17005 16041 16803 20430 25004 21063 24467 22484 21591 19515 29488 22114 25443 20228 19337 25166 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49652000 28411 3881 26685 53394 43095 43095 1 9606 Homo sapiens 0.06387113409300582 VDDLPEDNQER Unmodified 1328.5844 0.58443771 579 A0A024R9J7;Q9BVC3 DCC1;DSCC1 Sister chromatid cohesion protein DCC1 yes no 0 0 0 1 0 1 40.738 40.738 2 2.6528E-06 10442 20230619_1880_Aki_TMTPro18x_K_F1 188.04 142.96 20580 14997 16884 21590 26762 27892 24730 23074 31499 21559 24520 25062 31293 24015 24856 29784 30737 27011 18989 13789 17636 21325 26968 27612 25241 23869 31405 22006 25781 25266 31409 25116 25738 29670 29326 25698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35684000 28412 579 26686 53395 43096 43096 1 9606 Homo sapiens -0.06671113134666484 VDDNEETIKK Unmodified 1189.5826 0.5826468 3375 Q6FGX9;Q53EY8;Q5T9B7;P00568 AK1 Adenylate kinase isoenzyme 1 yes no 0 0 1 2.5 0.5 1 1 41.138 41.206 3 0.00013374 10131 20230619_1882_Aki_TMTPro18x_K_F3 127.17 91.215 77785 36299 98554 104980 135210 168880 146010 173670 159930 111750 204950 260970 146820 182090 206200 61934 210390 223980 71891 33847 99043 101070 137920 165780 147070 175350 163540 120770 206100 255080 154870 183940 208050 73748 201350 210970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61913000 28413 3375 26687 53396;53397 43097 43097 1 9606 Homo sapiens -0.0045612215262735845 VDDPQDVFKPTTSR Unmodified 1603.7842 0.78420015 1255 O94901-9;A0A146IHP0;E9PHI4;A7MCZ7;O94901;O94901-5;H0Y742;A4D2Q0;O94901-6;H0Y6N5;B4E278;A0A8I5G938;H7C2K3 SUN1;UNC84A SUN domain-containing protein 1 yes no 0 0 1 5 0 1 47.652 47.728 3 1.5669E-06 12775 20230619_1885_Aki_TMTPro18x_K_F5 121.99 75.584 107690 83946 86703 99681 76358 99767 103250 99472 111120 133930 131120 135490 145350 118220 127730 148740 142000 153500 99385 77004 89769 99382 81025 100850 102810 102580 113660 133510 134230 136870 147020 124170 131100 149180 135810 145710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106890000 28414 1255 26688 53398 43098 43098 1 9606 Homo sapiens 0.006459418130589256 VDDQIYSEFRK Unmodified 1398.6779 0.67794416 1963 Q9P0N4;A6NDF3;Q9BVG4 PBDC1 Protein PBDC1 yes no 0 0 1 6 0 1 51.179 51.256 3 0.00036493 14451 20230619_1886_Aki_TMTPro18x_K_F6 96.059 72.31 123020 109000 118680 127550 126610 140190 159840 144770 170950 150490 170760 155400 162870 144140 156630 177520 160800 159320 113780 99927 121120 127480 131760 140930 159520 147770 173410 151970 174780 157270 166210 150760 159730 176790 153800 151520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62933000 28415 1963 26689 53399 43099 43099 1 9606 Homo sapiens -0.005447689615948548 VDDSSEDKTEFTVK Unmodified 1598.7312 0.73116153 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 1 3.5 1.12 1 1 1 1 48.306 48.366 3 9.4979E-09 13208 20230619_1883_Aki_TMTPro18x_K_F4 159.13 138.03 516230 413830 474800 472640 454610 467680 509680 503280 542730 652650 728830 788870 660880 558940 769680 688350 642140 580130 476970 379430 485390 472680 475080 474370 512010 515780 558740 655280 736730 786490 681520 590640 773250 684010 615200 552390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 953840000 28416 1637 26690 53400;53401;53402;53403 43100;43101;43102;43103 43102 4 9606 Homo sapiens -0.04425480760255596 VDDSSGSIGR Unmodified 991.45705 0.45705235 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4 GARS Glycine--tRNA ligase yes no 0 0 0 2 0 1 34.706 34.762 2 2.0576E-05 7559 20230619_1881_Aki_TMTPro18x_K_F2 194.84 140.23 58609 27240 64231 73095 88127 95897 71883 97978 66468 58764 105130 144020 91024 97053 113440 35915 122600 124870 54091 25358 65187 70251 89161 95175 73365 98857 69478 64016 105750 140510 94525 98405 115020 42323 117230 117650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113580000 28417 3576 26691 53404 43104 43104 1 9606 Homo sapiens -0.03901789218173235 VDEAIALFQK Unmodified 1132.6128 0.61282471 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32 VARS Valine--tRNA ligase yes no 0 0 0 7.5 0.5 1 1 62.58 62.611 3 0.00017904 18892 20230619_1888_Aki_TMTPro18x_K_F8 119.62 96.975 613310 394320 495130 644370 415830 600020 509200 533700 774110 834380 856080 1058400 1024100 987010 582220 1312700 1259500 1398500 565450 363330 512620 628990 442680 607960 516390 558120 777290 834130 882450 1061900 1020500 1037200 641280 1316200 1199500 1326900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 887000000 28418 725 26692 53405;53406 43105;43106 43106 2 9606 Homo sapiens 0.05182281303223135 VDEAVAVLQAHHAK Unmodified 1486.7892 0.78922595 1667 Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;H0Y5F5;H0YEU6;Q59GZ7;A0A7I2V4V6;H0Y6X6;H0YER0 PABPC4 Polyadenylate-binding protein 4;Polyadenylate-binding protein yes no 0 0 0 7.5 0.5 1 1 48.129 48.202 4 9.3862E-07 12786 20230619_1888_Aki_TMTPro18x_K_F8 111.39 92.976 68020 47865 58121 64875 58701 80380 70616 74537 106840 78689 73155 81715 106900 92147 70500 132510 120000 160540 62766 43986 59938 64302 61464 79909 71599 76638 105400 79495 78130 83273 106390 96901 75418 133850 114620 152040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 345160000 28419 1667 26693 53407;53408 43107;43108 43108 2 9606 Homo sapiens 0.06530290466344013 VDEAVAVLQAHQAK Unmodified 1477.7889 0.7888916 566 P11940;A0A024R9C1;B4DZW4;A0A7I2V649;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQ90;A0A7I2YQE4;Q3ZCS4;Q9H361;Q5VX58;Q2VIP3;H0YAS6;H0YB75;H0YAS7;H0YC10;L0R533 PABPC1;PABPC3;RLIM Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 yes no 0 0 0 6.5 0.5 1 1 52.757 52.831 3 4.737299999999999E-22 14824 20230619_1887_Aki_TMTPro18x_K_F7 220.32 190.99 798640 560860 663100 779570 626600 792030 700770 750100 1078400 1050200 969010 1178500 1523200 1207900 686630 2187700 1759800 2095200 736790 515540 685090 769160 657640 798640 714040 777230 1073700 1049700 1023800 1193500 1498200 1297200 780610 2172200 1675700 1989700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1103500000 28420 566 26694 53409;53410 43109;43110 43110 2 9606 Homo sapiens 0.06910870746492037 VDEEQMK Oxidation (M) 893.38005 0.38004758 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 1 0 1.5 0.5 1 1 35.397 35.426 2 0.065792 8155 20230619_1880_Aki_TMTPro18x_K_F1 71.877 35.176 45944 20771 55322 55177 79912 86289 60675 76511 58497 40639 76416 95066 53141 64862 74326 29005 88686 84340 42436 19335 55780 53229 80488 84583 62294 77839 60322 44641 76709 92906 56121 65956 75738 32979 84685 79536 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30277000 28421 3444 26695 53411;53412 43111 43111 2080 1 9606 Homo sapiens -0.07090723758869899 VDEEQMK Unmodified 877.38513 0.38513296 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 2 0 1 40.542 40.615 2 0.0078468 10085 20230619_1881_Aki_TMTPro18x_K_F2 121.99 73.485 89915 49946 115750 115290 168420 177030 121440 169050 131110 101620 171740 208530 146490 153030 156830 67908 203030 188460 83173 46307 116200 111750 169380 173990 125650 171300 134480 109530 173460 204710 151010 155160 161320 76676 193710 177780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64859000 28422 3444 26695 53413 43112 43112 1 9606 Homo sapiens -0.05846419896261068 VDEERENFLQTK Unmodified 1506.7314 0.7314363 1899 Q9BYD6;A0PJ79;H0Y8N7 MRPL1 39S ribosomal protein L1, mitochondrial yes no 0 0 1 4 0 1 46.298 46.341 3 7.7229E-05 12300 20230619_1883_Aki_TMTPro18x_K_F4 95.538 79.967 193800 131280 161670 221430 201780 257100 244560 228190 290610 255640 280490 291070 304950 257590 244430 319020 337680 324020 178760 120990 167960 216420 207950 256370 245380 235920 292930 258080 289340 292820 307680 270060 255160 319650 322090 307750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116740000 28423 1899 26696 53414 43113 43113 1 9606 Homo sapiens -0.0016601624972736317 VDEIFGQLR Unmodified 1075.5662 0.56620887 4625 Q9NY12-2;Q9NY12 GAR1 H/ACA ribonucleoprotein complex subunit 1 yes no 0 0 0 6.33 0.471 2 1 60 60.053 2 3.7E-08 18124 20230619_1886_Aki_TMTPro18x_K_F6 157.33 138.23 77898 57241 73528 92869 70457 112670 91162 87560 105740 107330 108250 117060 120090 102030 113860 128050 118520 138990 71951 52706 75182 91012 74282 111710 91157 91735 107020 107740 111540 117880 121890 107140 116240 128820 113500 131830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280800000 28424 4625 26697 53415;53416;53417 43114;43115 43114 2 9606 Homo sapiens 0.03144841471953441 VDEMSQDIVK Unmodified 1162.554 0.5539892 2400 Q5BKY2;Q6IB98;Q53HR0;Q53HG0;B3KS98;O15372;E5RJT0 EIF3H;EIF3S3 Eukaryotic translation initiation factor 3 subunit H yes no 0 0 0 2.5 0.5 1 1 51.384 51.442 3 0.001432 14789 20230619_1882_Aki_TMTPro18x_K_F3 90.142 26.518 159030 117950 159600 165400 139740 193150 172920 164080 210100 212010 218850 235570 256650 206940 199370 261710 236930 262160 146970 108410 161870 163440 147960 192400 173590 170950 212330 212460 225840 237110 257950 217350 206170 261950 226510 248910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153140000 28425 2400 26698 53418;53419 43116 43116 1 9606 Homo sapiens -0.020785630534192023 VDENFDCVEADDVEGK Unmodified 1839.7469 0.74688795 3226 O14929;O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit yes no 0 0 0 1 0 1 54.222 54.222 2 0.0027111 16092 20230619_1880_Aki_TMTPro18x_K_F1 96.103 86.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28426 3226 26699 53420 43117 43117 1 9606 Homo sapiens -0.13939562305517939 VDENHSEFTLYESR Unmodified 1724.7642 0.76419299 1061 A0A0S2Q0B1;O14497;O14497-2;H0Y488;A0A1B0GTU5;O14497-3;Q96SM7;Q8NC65;Q96T01;Q96SY8;A4FU79 ARID1A AT-rich interactive domain-containing protein 1A yes no 0 0 0 1.5 0.5 1 1 45.551 45.592 3 5.0769E-05 12570 20230619_1880_Aki_TMTPro18x_K_F1 99.451 85.193 25431 20522 27883 30397 31094 35593 31397 30912 37744 30325 36477 32587 37739 27755 34122 31748 37837 41448 23532 18867 28186 29937 32063 35474 31837 31892 38014 30766 37512 32834 38276 29038 34953 32387 36191 39251 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152200000 28427 1061 26700 53421;53422 43118 43118 1 9606 Homo sapiens -0.06919853917520413 VDESGPPAPSKPR Unmodified 1335.6783 0.67827852 3001 G1UI16;Q29RF7;B3KMN2;Q96DB6 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 1 5.5 0.5 1 1 37.667 37.751 3 9.9168E-08 8607 20230619_1886_Aki_TMTPro18x_K_F6 151.74 126.88 152790 121410 130340 140760 174250 187850 157700 151140 228030 184820 191100 190070 204400 161130 161460 176790 212030 168140 141080 111330 134980 141170 177230 185580 162060 157830 226780 185290 198310 191670 206120 168040 167790 176920 202080 159960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 112740000 28428 3001 26701 53423;53424 43119 43119 1 9606 Homo sapiens 0.023866507582852137 VDEVGGEALGR Unmodified 1100.5462 0.54620171 2797 CON__Q3SX09;CON__P02070 yes no 0 0 0 1.5 0.5 1 1 43.865 43.906 2 9.8335E-12 11611 20230619_1881_Aki_TMTPro18x_K_F2 214.54 167.46 + 95831 124470 139300 128810 253970 314260 200040 194770 398660 387520 770280 1433700 531440 756920 624690 784920 1090200 1979700 89270 113850 139630 132100 253850 300930 211060 212810 408780 412780 766820 1382700 556980 804240 660480 854100 1044700 1864400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 636250000 28429 2797 26702 53425;53426 43120;43121;43122 43122 3 9606 Homo sapiens -4.95425865665311E-05 VDEVPDGAVKPPTNK Unmodified 1564.8097 0.80968662 3306 O75475;Q05CM9;O75475-3;O75475-2;Q8N4N4 PSIP1 PC4 and SFRS1-interacting protein yes no 0 0 1 5 0.816 1 1 1 46.272 46.34 3 1.1423E-07 12248 20230619_1886_Aki_TMTPro18x_K_F6 111.74 99.114 317030 234730 258230 324030 280830 314370 285980 286790 329520 351100 381210 383210 395100 335660 347170 420350 430150 402770 292530 215700 267920 319600 290290 317950 289480 296730 335430 352350 389270 386050 400580 352240 358840 419860 410580 382840 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 899550000 28430 3306 26703 53427;53428;53429 43123;43124;43125 43125 3 9606 Homo sapiens 0.04987416335507078 VDFNVPMK Unmodified 948.47389 0.47388839 3374;1199 V9HWF4;P00558;B4E1H9;B4DHB3;P07205;A0A140VJR3;V9HW85 HEL-S-68p;PGK1;PGK2;HEL-S-272 Phosphoglycerate kinase;Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 no no 0 0 0 5.33 3.09 1 1 1 56.032 56.072 2;3 0.0025154 16169 20230619_1888_Aki_TMTPro18x_K_F8 125.49 79.794 776400 646840 698290 800680 625570 822740 769530 772600 816550 960700 953650 1065900 1054400 929120 953200 1085200 1011800 1139100 717400 593440 715540 796140 660590 828860 769320 797950 835410 963760 977230 1072300 1068300 971060 975060 1090700 968360 1080900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1179700000 28431 3374;1199 26704 53430;53431;53432 43126;43127 43127 2 9606 Homo sapiens -0.0024095986592556073 VDFNVPMK Oxidation (M) 964.4688 0.46880301 3374;1199 V9HWF4;P00558;B4E1H9;B4DHB3;P07205;A0A140VJR3;V9HW85 HEL-S-68p;PGK1;PGK2;HEL-S-272 Phosphoglycerate kinase;Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 no no 0 1 0 7.5 0.5 1 1 51.922 51.998 3 0.026271 14516 20230619_1887_Aki_TMTPro18x_K_F7 60.973 33.448 775050 620230 693970 763750 883050 807180 791300 793550 827830 812890 860220 861650 843090 745100 881710 923520 875950 910730 715950 569090 714700 760100 898630 813130 804450 812240 842870 821910 880570 868790 862990 781700 895840 924390 838400 865020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 813440000 28432 3374;1199 26704 53433;53434 43128;43129 43128 732 2 9606 Homo sapiens -0.014852637285457604 VDFPQDQLTALTGR Unmodified 1559.7944 0.79437091 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 7.25 0.829 1 1 2 61.086 61.134 2 7.9463E-12 18517 20230619_1886_Aki_TMTPro18x_K_F6 213.06 174.28 395230 325280 358860 434060 358820 396100 415480 397720 438600 470560 506480 506610 510030 445080 509350 538630 522870 581850 365190 298670 368030 428780 374280 403440 416420 408350 448340 472670 516710 510650 520430 466110 518890 542100 500560 551970 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4382800000 28433 297 26705 53435;53436;53437;53438 43130;43131;43132;43133;43134;43135 43130 6 9606 Homo sapiens 0.03686549538315376 VDFSITK Unmodified 808.43307 0.43306943 2322 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995-3;P62995;H7BXF3;H7C2L4 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta yes no 0 0 0 7.5 0.5 1 1 53.785 53.854 2 0.015793 15257 20230619_1887_Aki_TMTPro18x_K_F7 110.81 29.173 946640 741080 867810 930070 1051600 1311900 1200400 1115500 1448700 865690 854650 699410 822930 677960 914010 849440 854540 715090 874500 680160 891650 928530 1083400 1292500 1208400 1146400 1436300 884650 902700 717740 845310 709190 924130 843650 817220 681130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 862710000 28434 2322 26706 53439;53440 43136 43136 1 9606 Homo sapiens 0.021190220860830777 VDFSPQPPYNYAVTASSR Unmodified 1997.9483 0.94830537 3028 H0Y8P4;Q8TED0;D6RF65 UTP15 U3 small nucleolar RNA-associated protein 15 homolog yes no 0 0 0 1 0 1 56.94 56.94 3 0.00011852 17244 20230619_1880_Aki_TMTPro18x_K_F1 86.453 66.027 34782 29197 34029 35129 28129 36794 36207 33301 39445 36966 33346 34049 42575 31247 34021 45799 37081 36882 32161 26779 34556 35015 29947 36990 36138 34373 39769 37084 34906 34621 42724 33106 34980 45255 35448 35126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19424000 28435 3028 26707 53441 43137 43137 1 9606 Homo sapiens -0.010750854868092574 VDFTFYPR Unmodified 1043.5076 0.50763136 4532 Q9H857-4;Q9H857;Q9H857-3;Q9H857-2;H7C519 NT5DC2 5'-nucleotidase domain-containing protein 2 yes no 0 0 0 1 0 1 57.915 57.915 2 0.021973 17684 20230619_1880_Aki_TMTPro18x_K_F1 87.251 59.997 76766 58511 67063 73004 73785 92525 89569 85806 102770 74957 72800 73205 79825 67831 68044 81751 80921 73007 70879 53703 69097 72784 76652 91884 89756 87829 102680 76344 76410 74238 80714 70873 70181 81407 77245 69464 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62102000 28436 4532 26708 53442 43138 43138 1 9606 Homo sapiens -0.01238215102534923 VDFVIPK Unmodified 816.47454 0.47454032 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;E9PLT0;E9PNG3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;A0A8I5KPQ8;A0A8I5KS07;A0A8I5KW29 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 0 4.5 3.5 1 1 58.272 58.295 2;3 0.03933 17797 20230619_1880_Aki_TMTPro18x_K_F1 91.041 52.803 228060 154050 178150 209580 133590 209750 180920 194050 226510 282930 247770 223210 299530 220760 156860 308850 258460 241530 210270 141590 184700 207020 144260 211540 181200 201650 229350 279310 255080 229340 297110 232570 168470 304720 246190 230180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 222950000 28437 88 26709 53443;53444 43139;43140 43139 2 9606 Homo sapiens 0.058962028454288884 VDGIAWSPETR Unmodified 1229.6041 0.60405094 2519 B4DKV8;Q8NFH4;F8VTY2 NUP37 Nucleoporin Nup37 yes no 0 0 0 4.5 0.5 1 1 52.156 52.205 2 2.9429E-06 14682 20230619_1885_Aki_TMTPro18x_K_F5 163.38 141.25 118270 111770 117260 120110 121760 149520 135470 132630 145610 174780 203300 231670 198780 180560 189810 190950 199530 222070 109460 102370 119310 121040 126590 148580 136160 137800 150140 176040 205880 230720 202630 188430 193720 193480 190970 210510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135330000 28438 2519 26710 53445;53446 43141;43142 43142 2 9606 Homo sapiens -0.0015669233323478693 VDHAGEYGANR Unmodified 1187.5319 0.53194863 3069 H3BSZ3;H3BS11;H3BTN8;I3L1T0;Q8NI45;Q49A71;H3BP28;Q99807-2;Q99807 COQ7 5-demethoxyubiquinone hydroxylase, mitochondrial yes no 0 0 0 2.5 0.5 1 1 29.559 29.645 3 2.7196E-06 5452 20230619_1882_Aki_TMTPro18x_K_F3 148.28 131.25 25544 11354 30226 34436 48207 39759 39032 42096 46032 30204 48874 42871 42381 38929 35727 19956 49705 40188 23588 10603 30596 32901 48290 39837 40106 42521 46536 31573 49673 42811 43169 39295 37122 21554 47357 37992 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45379000 28439 3069 26711 53447;53448 43143;43144 43144 2 9606 Homo sapiens -0.054316066869887436 VDHTGEYGNLVTIQSFK Unmodified 1906.9425 0.94249171 236 A0A024R3C7;Q13315;B4DSP3 ATM Serine-protein kinase ATM yes no 0 0 0 7 0 1 55.959 56.017 3 0.00026485 16191 20230619_1887_Aki_TMTPro18x_K_F7 80.738 66.266 27521 14801 23442 27803 27831 27772 29837 28045 32742 29692 33225 33653 34601 29673 32829 33713 29502 33132 25362 13677 24243 26984 28601 28079 30051 28688 33202 30046 34133 33854 35180 30948 33237 33783 28284 31461 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6200200 28440 236 26712 53449 43145 43145 1 9606 Homo sapiens 0.025298160014926907 VDHVQMIVLDEADK Unmodified 1610.7974 0.79740737 2256 P26196;B2R858 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 0 4 0.816 1 1 1 55.329 55.368 3 5.7093E-08 16388 20230619_1883_Aki_TMTPro18x_K_F4 144.8 130.64 147090 67089 135600 149720 123120 127460 145610 143100 171710 163290 169700 150790 172250 140550 148410 181570 156840 180870 135540 62236 138580 143980 129470 130820 146350 145700 173350 163580 174160 153410 174540 147540 152000 181660 150150 171710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162310000 28441 2256 26713 53450;53451;53452 43146;43147 43147 2 9606 Homo sapiens 0.016440566008441237 VDIAEGR Unmodified 758.39227 0.39226725 3913;3914 Q15056;A0A7I2V4E4;Q75MU1;B4DMV6;Q75MU2;Q15056-2;A0A7I2V385;A4D198 EIF4H;WBSCR1;LOC392647 Eukaryotic translation initiation factor 4H no no 0 0 0 2 0 1 38.316 38.379 2 0.07792 9113 20230619_1881_Aki_TMTPro18x_K_F2 73.616 41.146 180470 98093 212800 218180 234380 272840 193710 241530 259070 187840 277860 281770 231990 231040 238960 115610 310950 297450 166780 90894 213810 210950 240800 270740 199930 247380 260610 195690 282200 279830 238830 233980 246120 128640 296720 280640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 605540000 28442 3913;3914 26714 53453 43148 43148 1 9606 Homo sapiens 0.003406807664873668 VDIAPHVR Unmodified 905.5083 0.50830006 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 6 0.816 1 1 1 37.535 37.605 3 0.00058507 8570 20230619_1886_Aki_TMTPro18x_K_F6 132.57 94.921 163080 107040 146560 139970 168880 163060 168360 174550 212340 166450 194900 191990 189830 163190 181800 196120 194990 185010 150490 98357 150520 139000 173560 163440 171150 177270 212960 169500 200550 192850 193550 170980 185810 195910 186360 175870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 216930000 28443 2863 26715 53454;53455;53456 43149;43150;43151 43151 3 9606 Homo sapiens 0.05176624337184421 VDIEAPDVSLEGPEGK Unmodified 1653.8097 0.8097462 3815 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 3 0 1 58.827 58.856 3 5.4345E-06 17916 20230619_1882_Aki_TMTPro18x_K_F3 111.43 94.066 35089 32255 38163 34117 30772 34867 35687 33158 46229 44357 39717 39436 43768 39282 49463 47837 37756 45283 32495 29538 38374 34339 32695 35180 36031 34299 46253 44097 41250 40253 44815 40971 49546 47800 36290 43010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59477000 28444 3815 26716 53457 43152 43152 1 9606 Homo sapiens 0.008993715448241346 VDIGDTIIYLVH Unmodified 1356.7289 0.7289171 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB3;Q9H8E3;Q9P2J5-3;Q9HAM7;Q9NPU8;B3KXA9 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 64.838 64.882 2 2.996E-10 20283 20230619_1886_Aki_TMTPro18x_K_F6 192.6 173.99 55578 48678 67420 58675 54360 64064 58018 70314 64268 65883 69399 70877 72086 72520 83397 70432 77300 91553 51505 44639 67250 58547 57600 64507 58564 71241 65343 66961 71128 71784 74090 74629 84200 72037 74118 86681 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139120000 28445 1603 26717 53458;53459 43153;43154 43154 2 9606 Homo sapiens 0.06482180083276035 VDILDPALLR Unmodified 1123.6601 0.66010926 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PM69;E9PKD5 PSMC3 26S protease regulatory subunit 6A yes no 0 0 0 6.5 0.5 1 1 62.557 62.601 2 0.00060108 19281 20230619_1886_Aki_TMTPro18x_K_F6 120.12 106.45 460990 394510 392670 445610 393420 505430 433120 524160 555240 545120 501040 472180 641720 435680 478710 596740 543980 654290 425860 361580 404970 446720 410600 506860 438420 534350 556880 547530 522400 481680 642020 459890 493940 599850 520610 620440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 553850000 28446 4761 26718 53460;53461 43155 43155 1 9606 Homo sapiens 0.10322560574218187 VDILYNNIK Unmodified 1090.6023 0.60226003 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 1 0 1 58.698 58.698 3 0.00047196 17997 20230619_1880_Aki_TMTPro18x_K_F1 113.62 68.759 86139 62052 68554 79017 64666 90752 81330 85973 113180 67921 72419 72837 84200 73064 68242 95038 100990 107840 79456 56979 71134 78544 68181 90701 81996 87670 111720 69867 76719 73810 84878 76541 71630 95770 96361 102260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62718000 28447 4746 26719 53462 43156 43156 1 9606 Homo sapiens 0.060582986487816015 VDINAPDVDVR Unmodified 1211.6146 0.61461563 3815 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 3 0 1 49.521 49.599 2 0.00023864 13932 20230619_1882_Aki_TMTPro18x_K_F3 151.07 122.91 222120 160760 159830 156340 187860 242080 224200 236980 301120 268980 260360 296440 275920 229890 281460 334700 312690 342750 204760 147250 168020 159510 194450 238140 226240 243130 300740 271000 270020 297420 281420 244900 288140 334910 299080 325350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141090000 28448 3815 26720 53463 43157 43157 1 9606 Homo sapiens 0.017272903211733137 VDINTEDLEDGTCR Unmodified 1635.7046 0.7046292 3484 P21333;P21333-2;Q60FE5;Q60FE6;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;Q2VP91;H0Y5C6 FLNA;FLJ00119 Filamin-A yes no 0 0 0 1 0 1 50.135 50.135 2 1.5016999999999999E-19 14404 20230619_1880_Aki_TMTPro18x_K_F1 200.44 188.58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28449 3484 26721 53464 43158 43158 1 9606 Homo sapiens -0.08779492923235921 VDIRPQLLK Unmodified 1080.6655 0.66552898 4054 Q5SSJ5;Q5SSJ5-2;B0QZK4;Q5SWC8;Q5SSJ5-3 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 1 3 0 1 50.293 50.368 3 0.0014604 14283 20230619_1882_Aki_TMTPro18x_K_F3 99.013 48.208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28450 4054 26722 53465 43159 43159 1 9606 Homo sapiens 0.1284228415670441 VDLAGGPEQGAGGPPEPQQQCQPGAS Unmodified 2531.1347 0.13467894 933 A0A0A0MRC4;Q86YR5;A0A0A0MSK4;Q86YR5-4;Q86YR5-2 GPSM1 G-protein-signaling modulator 1 yes no 0 0 0 3 0 1 51.928 51.994 3 0.0061245 15031 20230619_1882_Aki_TMTPro18x_K_F3 56.95 53.806 15196 14486 17258 19187 17654 17868 19526 17711 20724 23661 22349 20483 23508 20567 20455 26564 22580 26370 14081 13294 17376 18970 18334 18170 19616 18272 21130 23495 22890 20952 23815 21532 21007 26567 21610 25035 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19282000 28451 933 26723 53466 43160 43160 1 9606 Homo sapiens -0.06964301171274201 VDLEPLK Unmodified 812.46437 0.46436956 2830 D3DVC4;P48681 NES Nestin yes no 0 0 0 4.33 0.471 2 1 53.371 53.416 2;3 0.056682 15224 20230619_1885_Aki_TMTPro18x_K_F5 87.754 8.6383 244530 187950 207570 220700 228740 273960 297390 282970 369450 344290 294610 282570 395490 276270 282070 414360 381660 301390 225740 172400 214420 220950 238100 273150 297900 289990 369450 342880 310010 289660 394790 292650 295010 407460 363650 287760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 314450000 28452 2830 26724 53467;53468;53469 43161;43162 43162 2 9606 Homo sapiens 0.050635951201911666 VDLGGFAGLFDLK Unmodified 1350.7184 0.71835242 3488 Q3B7A7;Q59HH3;P22102;B4DJ93;O14660;Q71VH3 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 2 0 1 65.915 65.922 3 6.1379E-08 21179 20230619_1881_Aki_TMTPro18x_K_F2 154.67 109.31 54504 46210 46922 53426 44552 49851 46447 46849 48123 63501 63377 62643 66918 53244 59080 72843 62374 67924 50351 42364 48292 53319 46537 50630 46809 48527 49614 63226 64455 63326 67779 56281 60476 72568 59686 64546 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67085000 28453 3488 26725 53470 43163 43163 1 9606 Homo sapiens 0.05702197428877298 VDLGSEVYR Unmodified 1036.5189 0.51892433 3618 P50479;A0A0S2Z4P0;A0A0S2Z4N4;P50479-2 PDLIM4 PDZ and LIM domain protein 4 yes no 0 0 0 4 0 1 47.59 47.63 2 0.00015897 12891 20230619_1883_Aki_TMTPro18x_K_F4 146.03 127.59 249750 205410 248170 226560 208080 213010 207750 202100 280290 302000 276100 274750 330400 261950 260880 312160 325750 303060 230940 188250 251420 227040 219310 216350 211870 209940 281540 299070 285760 279660 332110 273410 270350 312240 310890 288030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117730000 28454 3618 26726 53471 43164 43164 1 9606 Homo sapiens 0.002125622009543804 VDLPLAVLSK Unmodified 1053.6434 0.64339656 4523 Q9H773;H3BSA6 DCTPP1 dCTP pyrophosphatase 1 yes no 0 0 0 2 0 1 63.07 63.08 3 0.016107 19996 20230619_1881_Aki_TMTPro18x_K_F2 68.069 50.205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28455 4523 26727 53472 43165 43165 1 9606 Homo sapiens 0.11872059688289482 VDLQSLPTR Unmodified 1027.5662 0.56620887 4479 Q9C005;B4DIS3 DPY30;LOC84661 Protein dpy-30 homolog yes no 0 0 0 7 0.816 1 1 1 48.246 48.324 2 0.013431 13201 20230619_1886_Aki_TMTPro18x_K_F6 78.939 46.046 79489 75863 88369 93879 83060 95930 79426 91599 121910 102740 96143 101820 102700 94026 96938 127810 138500 127850 73646 69567 88973 93356 86693 96747 81655 94153 120750 103260 100170 103180 104460 99012 101130 127790 132040 121470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 445930000 28456 4479 26728 53473;53474;53475 43166 43166 1 9606 Homo sapiens 0.05352841471949432 VDLSTSTDWK Unmodified 1150.5506 0.55061839 1640 A0A6Q8PH91;Q9BQ69 MACROD1 O-acetyl-ADP-ribose deacetylase MACROD1 yes no 0 0 0 5.5 0.5 1 1 54.735 54.807 3 0.00040003 15960 20230619_1886_Aki_TMTPro18x_K_F6 107.55 69.262 28793 29933 34442 34360 27860 32289 38335 38216 44951 37838 46355 53364 49737 44053 51633 43996 51642 51305 26712 27421 34425 34330 29739 32947 38257 38635 45434 38735 47703 53131 50754 45735 52426 44654 49408 48653 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127210000 28457 1640 26729 53476;53477 43167 43167 1 9606 Homo sapiens -0.0186348983577318 VDLVCHGK Unmodified 926.46439 0.46438634 2402 B3KSC8;I3L1L9;B7Z4W6;Q99447-2;Q99447-4;Q99447;Q99447-3;I3L3V9 PCYT2 Ethanolamine-phosphate cytidylyltransferase yes no 0 0 0 7 0 1 40.945 41.013 3 0.0017608 9653 20230619_1887_Aki_TMTPro18x_K_F7 111.17 80.664 78470 55582 72116 69435 73685 75856 91434 83244 105590 85224 114440 108080 101250 95907 99317 95778 127510 112000 72449 51031 73800 69097 76868 76400 91578 84610 106980 86756 116380 108310 103750 99289 102550 97183 121620 106260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116430000 28458 2402 26730 53478 43168 43168 1 9606 Homo sapiens -0.0017872815144528431 VDLVDENFTELR Unmodified 1448.7147 0.7147236 3688 P61086;B4DIZ2;D6RDM7;P61086-3 UBE2K Ubiquitin-conjugating enzyme E2 K yes no 0 0 0 2.5 0.5 1 1 61.054 61.074 2 1.2272999999999999E-23 18859 20230619_1882_Aki_TMTPro18x_K_F3 275.84 245.27 204210 136110 179880 229260 164590 227870 202190 205450 245360 274500 256710 274180 298990 252510 251740 319370 277870 323770 188420 125440 184880 223630 173670 229770 203060 213330 248180 273700 264790 277600 301560 264750 258650 319900 265930 307300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 351770000 28459 3688 26731 53479;53480 43169;43170 43170 2 9606 Homo sapiens 0.008314828643278815 VDMMDLPR Acetyl (Protein N-term) 1017.4623 0.46233743 1932 P35244;A4D105 RPA3 Replication protein A 14 kDa subunit yes no 1 0 0 1.5 0.5 1 1 62.205 62.21 2 0.0047784 19383 20230619_1880_Aki_TMTPro18x_K_F1 95.541 58.521 6903.3 5975.8 9026.6 6820.9 10321 8919.7 9416 8154.2 11166 13519 13251 10024 11191 9201.3 11629 12342 13216 15371 6401.9 5477.4 8996 6852.9 10570 8852.6 9601.6 8523.9 11371 13267 13385 10314 11506 9696.6 11910 12517 12645 14559 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37512000 28460 1932 26732 53481;53482 43171 43171 1 9606 Homo sapiens -0.045695249515688374 VDNAYWLWTFQGR Unmodified 1654.7892 0.78922595 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 3.5 0.5 1 1 63.921 63.94 2 0.00014786 20109 20230619_1882_Aki_TMTPro18x_K_F3 113.77 84.68 26250 17307 24750 23869 17710 21551 19933 21126 26571 28063 25676 29131 32944 31516 31414 31594 30874 37478 24231 15912 25152 23537 19045 21953 20195 21802 26680 28030 26732 29592 33342 32431 31943 32079 29591 35510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57553000 28461 487 26733 53483;53484 43172 43172 1 9606 Homo sapiens -0.011977095336533239 VDNDENEHQLSLR Unmodified 1567.7227 0.72266253 1089 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;A0A7I2V4G8;A0A7I2V3G5;A0A7I2V579;E5RGW4 NPM1 Nucleophosmin yes no 0 0 0 3.4 2.06 1 1 1 1 1 38.007 38.046 3 1.9156E-69 9179 20230619_1880_Aki_TMTPro18x_K_F1 350.18 325.17 1845700 1350100 1588400 1703200 1805000 2017700 1868500 1850700 1992900 2133600 2362900 2497700 2501300 2076400 2001700 2606000 2716500 2477500 1703600 1239500 1638900 1695000 1860200 2012500 1884500 1909800 2038800 2151800 2413400 2505000 2524900 2183500 2086900 2601400 2590600 2355400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 38585000000 28462 1089 26734 53485;53486;53487;53488;53489 43173;43174;43175;43176 43173 4 9606 Homo sapiens -0.03848989886182608 VDNEFDQR Unmodified 1021.4465 0.44648767 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 1 0 1 39.535 39.535 2 0.0021551 9848 20230619_1880_Aki_TMTPro18x_K_F1 146.03 100.01 390670 280560 361130 375750 435050 463780 421030 422890 559290 466250 544820 544310 544840 443860 471470 511690 609550 555310 360740 257760 370480 372730 445840 461330 429580 435980 561040 471470 559540 545650 552580 464860 488520 515460 581500 527170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 301820000 28463 3881 26735 53490 43177;43178 43177 2 9606 Homo sapiens -0.06337771872620124 VDNHLFNK Unmodified 985.49813 0.49812931 3599;3755 P48426;P48426-2;A0A087WT35;P78356;P78356-2 PIP4K2A;PIP4K2B Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha;Phosphatidylinositol 5-phosphate 4-kinase type-2 beta no no 0 0 0 7.5 0.5 1 1 44.482 44.532 3 0.025465 11302 20230619_1888_Aki_TMTPro18x_K_F8 65.347 47.911 122220 85206 101570 117650 113350 146780 146300 127500 181450 157930 181060 202000 205750 193430 160010 253590 223960 252120 112750 78319 105230 116470 117960 145680 146590 132460 182740 159430 186950 202890 207240 202870 167570 253490 213860 239370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148740000 28464 3599;3755 26736 53491;53492 43179 43179 1 9606 Homo sapiens 0.004800166119480309 VDNIQAGELTEGIWR Unmodified 1699.8529 0.85294842 315 A0A024R4Z6;Q08945;Q59GH7 SSRP1 FACT complex subunit SSRP1 yes no 0 0 0 5 0 1 61.347 61.398 3 1.1152E-18 18497 20230619_1885_Aki_TMTPro18x_K_F5 182.35 147.35 80013 70499 76829 74841 74176 83975 83804 83114 95492 90472 85579 91350 94177 95877 94085 106300 100350 103660 73997 64573 78262 75395 77548 84229 84311 85161 96246 91096 88711 92856 95962 99228 96088 106480 95977 98468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161410000 28465 315 26737 53493 43180 43180 1 9606 Homo sapiens 0.0310160611277297 VDNLTYR Unmodified 879.44503 0.4450311 539;233 J3KP15;Q53FN0;A0A024R8U5;Q01130;B3KUY1;J3QL05;Q8NAK9;Q01130-2;B3KX15;Q6NXQ0;Q8N220;B3KVY2;B3KUF7;A4D2F7;A4D2F6;A0A024R3A8;Q9BRL6-2;Q9BRL6 SRSF2;SFRS2;LOC346472;LOC392896;SRP46;SRSF8 Serine/arginine-rich splicing factor 2;Serine/arginine-rich splicing factor 8 no no 0 0 0 5.5 1.12 1 1 1 1 41.483 41.556 2 0.0078941 10146 20230619_1885_Aki_TMTPro18x_K_F5 121.62 62.414 910230 610890 741970 864670 986110 1054300 976120 981660 1242300 1015900 1118700 1158300 1183600 1014200 974420 1128300 1317100 1144100 839440 561770 772130 854440 1005300 1049800 992690 1008700 1245000 1029800 1156500 1164500 1196400 1056800 1014200 1132600 1255700 1087100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3901499999.9999995 28466 539;233 26738 53494;53495;53496;53497 43181;43182;43183 43182 3 9606 Homo sapiens 0.00048638829287028784 VDNMIIQSISLLDQLDK Oxidation (M) 1960.0187 0.018693117 2138 A8K9K6;O00567;A0PJ92;A0A494C128;Q5JXT2 NOP56 Nucleolar protein 56 yes no 0 1 0 7 0 1 65.384 65.411 3 6.4008E-08 20340 20230619_1887_Aki_TMTPro18x_K_F7 120.9 96.597 35858 37286 39214 40921 49327 43025 52153 40054 49553 41428 64864 53044 46823 39765 56159 45234 41498 55965 33239 34144 39712 41069 50389 43327 52318 41211 51157 42160 64978 52923 48769 41754 56082 46004 39947 52989 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145310000 28467 2138 26739 53498 43184 43184 1338 1 9606 Homo sapiens 0.07708451786652404 VDNMIIQSISLLDQLDK Unmodified 1944.0238 0.023778495 2138 A8K9K6;O00567;A0PJ92;A0A494C128;Q5JXT2 NOP56 Nucleolar protein 56 yes no 0 0 0 8 0 1 68.043 68.062 3 0.053451 21145 20230619_1888_Aki_TMTPro18x_K_F8 42.338 27.647 2919 2474.6 3708.1 2940.9 1100.5 2472.6 2951.4 3176.9 4049.7 2528.9 4546.9 1933.4 3398.1 2638.8 4807 3202.1 3578 3004.6 2705.8 2269.3 3658.9 2929 1192.3 2548.9 2906.3 3179.2 4070.1 2575.8 4575.7 1892.7 3567.8 2730.4 4786.4 3202.9 3431.3 2858 2 2 2 2 1 2 2 2 2 2 2 1 2 2 2 2 2 2 911820 28468 2138 26739 53499 43185;43186 43185 2 9606 Homo sapiens 0.08952755649283972 VDNSSLTGESEPQTR Unmodified 1618.7435 0.74345755 3387;959 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z1Q9;B7Z3F8;B4DHD7;Q53FM3;A0A384MR29;Q658V6;P20648;M0QXF2;A0A0S2Z3D3;P05023;P05023-4;P05023-3;B7Z3V1;P05023-2;B3KRI1;B2RAQ4;P50993;B1AKY9;A0A0S2Z3W6 ATP1A3;DKFZp666G172;ATP4A;ATP1A1;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2 no no 0 0 0 1.5 0.5 2 2 39.361 39.396 2;3 8.399599999999999E-19 9515 20230619_1881_Aki_TMTPro18x_K_F2 202.01 182.18 204060 115620 198540 214360 268360 281730 234110 261340 270620 193710 246940 255810 240750 212210 246900 204590 314960 248460 188280 106790 203260 209060 272240 279130 239210 266490 272430 201390 254310 255410 246340 219920 254430 208350 300240 235770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1157900000 28469 959;3387 26740 53500;53501;53502;53503 43187;43188 43188 2 9606 Homo sapiens -0.04116444297187627 VDPALFPPVPLFTAVPSR Unmodified 1922.0666 0.066570008 1401 Q13724;A0A384MDR6;Q58F09;Q13724-2;A0A8I5KTK5;A0A3B3IRK6;A0A3B3IRW2;A8K9K4;A0A3B3IS52 MOGS;GCS1 Mannosyl-oligosaccharide glucosidase yes no 0 0 0 5 0.816 1 1 1 65.725 65.758 3 4.4286E-14 20675 20230619_1883_Aki_TMTPro18x_K_F4 162.26 150.57 34309 27139 31444 37506 30449 36463 33077 37739 39660 40200 36472 47762 43574 38428 43973 52866 46123 59854 31696 24933 32202 36999 31816 36964 33421 38529 39931 40714 37970 47808 44283 40712 44881 53249 44204 56725 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 173060000 28470 1401 26741 53504;53505;53506 43189;43190 43189 2 9606 Homo sapiens 0.14241938559621303 VDPEIQNVK Unmodified 1040.5502 0.55022446 2787 CON__P35908v2;CON__P35908;P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal no no 0 0 0 4 0 1 47.098 47.14 2 0.0098881 12710 20230619_1883_Aki_TMTPro18x_K_F4 95.502 45.912 + 25620 21888 27844 39050 298690 33358 19889 31751 53683 39423 50569 53587 59985 135190 43106 47904 59567 59583 23714 20168 31762 37904 279100 34949 37264 32746 53028 40026 52431 56499 60704 131770 45061 50260 56835 56468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23064000 28471 2787 26742 53507 43191 43191 1 9606 Homo sapiens 0.03157135235028363 VDPLETELGVK Unmodified 1198.6445 0.64451877 3795 Q9BUI6;Q05086-3;A0A0D9SG77;A0A6Q8PHE5;A0A1B0GVL3;Q9H2G0;Q05086-2;Q05086;Q96GR7;Q5W7F7 UBE3A Ubiquitin-protein ligase E3A yes no 0 0 0 4 0 1 59.058 59.06 3 3.0155E-05 17931 20230619_1883_Aki_TMTPro18x_K_F4 113.47 58.865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28472 3795 26743 53508 43192 43192 1 9606 Homo sapiens 0.05314229266491566 VDPSLMEDSDDGPSLPTK Unmodified 1901.8564 0.85643839 3238 Q5T094;Q9P0H9;O15258;Q5T092;A0A0A0MR06;Q5T091 RER1 Protein RER1 yes no 0 0 0 3.5 0.5 1 1 58.622 58.638 3 1.5198E-09 17865 20230619_1882_Aki_TMTPro18x_K_F3 130.56 119.7 70944 56529 63839 73495 58376 67606 69531 73552 86454 76343 74391 87610 94947 81264 70027 110990 95218 115940 65535 51897 65419 72746 61434 68935 69996 74817 86635 77365 77859 88241 95107 85609 73272 111190 91004 109990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33525000 28473 3238 26744 53509;53510 43193;43194 43193 2 9606 Homo sapiens -0.0584155668616404 VDPVNFK Unmodified 817.4334 0.43340378 2774 CON__P01966;G3V1N2;I1VZV6;A0A385HW21;A0A385HW02;A0A385HVZ2;A0A385HVY8;A0A385HW63;A0A2R8Y7C0;E9M4D4;Q4ZGM8;U6A216;A0A1K0GXZ1;Q96T46;A0A1S5UZ39;P69905;D1MGQ2;E1B2D1;Q86YQ1;Q9NQT3;V9H1D9;Q6J1Z9;E9LUX2;Q86YL2;Q86YQ4;P78461;A0A0K2BMD8;Q1W6G9;P02008 HBA2;HBA1;HBZ Hemoglobin subunit alpha;Hemoglobin subunit zeta yes no 0 0 0 7 0.816 1 1 1 50.669 50.748 2 0.027258 14213 20230619_1886_Aki_TMTPro18x_K_F6 101.64 43.832 + 401280 403030 471270 463970 668810 714630 670680 615550 806160 1063800 1743500 2251100 1054500 1223000 1612600 1014300 1155200 1440300 372110 369270 475950 466890 678850 701540 680630 648120 850010 1085900 1718700 2193200 1125700 1282300 1601600 1048800 1111700 1362400 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1544199999.9999998 28474 2774 26745 53511;53512;53513 43195;43196 43195 2 9606 Homo sapiens 0.017384418059464224 VDQALHTQTDADPAEEYAR Unmodified 2128.9661 0.96614027 3637 Q9BW75;Q96CV8;P52888;K7EP46;B4DU96;K7EL02;P52888-2;K7EIK4;K7EL32 THOP1 Thimet oligopeptidase yes no 0 0 0 1.5 0.5 1 1 44.935 44.976 3 3.2387E-31 12125 20230619_1881_Aki_TMTPro18x_K_F2 228.01 212.42 76226 56847 73342 83101 78756 89280 91127 82259 107860 94694 102270 108570 112490 98466 84871 104510 112570 122050 70423 52272 74896 81804 81748 89619 91649 84896 108680 95502 105650 109220 113210 102230 88426 105850 107500 115710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 575750000 28475 3637 26746 53514;53515 43197;43198 43198 2 9606 Homo sapiens -0.05318415022566114 VDQFDPFTVPTISFICR Unmodified 2040.9979 0.9978981 1575 B2RBY4;A0A5F9ZHB6;P49642;Q53F98;H0YIP2;A0A3B3ITS8 PRIM1 DNA primase;DNA primase small subunit yes no 0 0 0 2 0 1 65.47 65.478 3 2.874E-06 21003 20230619_1881_Aki_TMTPro18x_K_F2 105.06 84.121 8252.3 7383.2 9093.1 8403.2 7168.6 8020.6 8209.8 7673 7292.3 9129.7 8397.3 8679.7 10377 8697.7 7970 9901.1 10743 8914.9 7641.6 6766.4 9133.2 8402.2 7621 8134.5 8195.5 7905.3 7537.3 9132.3 8651.7 8831.8 10415 9034.8 8309.3 9870.7 10239 8484.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23770000 28476 1575 26747 53516 43199 43199 1 9606 Homo sapiens 0.019039061975945515 VDQIIMAK Unmodified 916.50519 0.50518852 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C2U0 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 1 0 1 55.336 55.336 3 0.058442 16577 20230619_1880_Aki_TMTPro18x_K_F1 48.794 33.132 27898 23576 32877 35367 29842 31219 30220 30293 34052 38974 38765 43049 38162 35807 37358 42317 39867 43644 25840 21675 32947 34680 31223 31860 30590 31260 34691 39035 39557 43252 38951 37502 38171 42482 38146 41426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43262000 28477 3621 26748 53517 43200 43200 1 9606 Homo sapiens 0.043596131681624684 VDQIIMAK Oxidation (M) 932.5001 0.50010314 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C2U0 CCT8 T-complex protein 1 subunit theta yes no 0 1 0 8 0 1 51.436 51.513 3 0.014385 14178 20230619_1888_Aki_TMTPro18x_K_F8 68.735 40.038 110750 86190 99539 110800 128020 122370 119310 117760 140590 135700 141610 135210 140010 122720 118000 155470 152070 138120 102290 79126 102520 110010 130390 122810 121450 121100 142090 136190 145100 136920 141960 128690 122460 154640 145070 131420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133260000 28478 3621 26748 53518 43201 43201 2306 1 9606 Homo sapiens 0.031153093055422687 VDQSAVGFEYQGK Unmodified 1426.6729 0.67285879 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;Q76MU0 CTTN;EMS1 Src substrate cortactin yes no 0 0 0 5 0.816 1 1 1 51.428 51.488 3 3.6354E-06 14542 20230619_1886_Aki_TMTPro18x_K_F6 131.53 100.1 280220 221880 265660 282000 220040 275000 282770 278470 248430 376810 359070 384310 424730 328720 340860 436780 386670 435860 258950 203660 270530 279770 233990 278630 280610 286920 260040 375460 366220 387870 427150 346790 351160 436830 369860 413820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 820080000 28479 1413 26749 53519;53520;53521 43202;43203 43203 2 9606 Homo sapiens -0.02341072824196999 VDQSILTGESVSVIK Unmodified 1573.8563 0.85630246 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;Q8N3X5;O14983-2;O14983;Q7Z675;Q7Z6E5;O14983-3 ATP2A2;ATP2A1;DKFZp779O2152;DKFZp779G2251 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Calcium-transporting ATPase yes no 0 0 0 7 0 1 60.226 60.272 2 4.2497E-10 17944 20230619_1887_Aki_TMTPro18x_K_F7 184.21 151.6 39867 35250 43418 50415 35831 44762 48643 43134 51592 53636 49577 55145 57684 52347 54509 66908 54709 58592 36910 32383 43750 49570 38186 45634 48391 44496 52338 53694 51365 55818 58488 54830 55567 66504 52370 55725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21080000 28480 1076 26750 53522 43204 43204 1 9606 Homo sapiens 0.092328561667955 VDREGSPVLLNCLMYK Oxidation (M) 1908.9438 0.94375403 247 A0A024R3J7;P46977;P46977-2 hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 1 1 1 0 1 54.929 54.929 3 0.00070936 16397 20230619_1880_Aki_TMTPro18x_K_F1 81.713 69.087 47050 44029 43643 51583 54145 48281 56488 53417 50817 48259 57003 42520 55674 44189 47976 60527 55202 55346 43519 40356 44814 51437 55361 49231 56642 54095 52327 48873 58038 43582 56477 46407 49391 60230 52748 52623 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65997000 28481 247 26751 53523 43205 43205 146 1 9606 Homo sapiens 0.025639907744334778 VDREQLVQK Acetyl (Protein N-term) 1155.6248 0.62478638 3701 P61981;B3KNB4;B4DE78 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes no 1 0 1 3 0.816 1 1 1 42.65 42.713 2 0.00019917 10700 20230619_1883_Aki_TMTPro18x_K_F4 49.358 15.62 1119100 980200 992880 1042900 1181100 1222300 1226100 1197900 1331500 1180700 1359800 1329200 1386000 1215700 1261100 1392500 1561100 1381300 1034300 897850 1022200 1050900 1212700 1222400 1236800 1225100 1351200 1199000 1394800 1339400 1408400 1266800 1301700 1395600 1489500 1312700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1288400000 28482 3701 26752 53524;53525;53526 43206;43207 43207 2 9606 Homo sapiens 0.053198980464458145 VDSAATSGYEIGNPPDYR Unmodified 1910.8646 0.86463532 3500 Q59EH3;P24666;G5E9R5;A0A140VK37;P24666-4 ACP1 Low molecular weight phosphotyrosine protein phosphatase yes no 0 0 0 3.5 0.5 1 1 50.207 50.262 3 2.6513E-30 14040 20230619_1883_Aki_TMTPro18x_K_F4 176.49 169.45 152420 125180 152100 150050 157840 175110 162490 169320 222250 192700 175710 189810 217150 183460 175260 242660 238270 208770 140940 114810 154600 149860 163730 175050 165410 173960 221210 193510 184340 192650 218420 192540 182790 240810 227160 198760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 440090000 28483 3500 26753 53527;53528 43208;43209 43209 2 9606 Homo sapiens -0.054362416545473025 VDSDKEDDITELK Unmodified 1505.7097 0.7096978 2366 B3KNU0;P52306-4;P52306;P52306-5;B7Z4M5;P52306-6;P52306-2;P52306-3;B7Z2V8;Q6U7G8;H0Y8M2 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 yes no 0 0 1 2.5 0.5 1 1 50.467 50.53 3 2.8401E-05 14690 20230619_1881_Aki_TMTPro18x_K_F2 118.2 88.143 200700 164240 168630 191690 210340 244140 209380 210600 230200 235150 271840 290020 263900 238780 248550 309960 305960 330880 185340 150600 174750 192000 215350 242110 211840 218120 235010 238000 276730 290260 269010 251680 256530 311300 292360 313960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 462890000 28484 2366 26754 53529;53530 43210 43210 1 9606 Homo sapiens -0.022928657889679016 VDSIDDR Unmodified 818.37701 0.37701112 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1 0 1 36.943 36.943 2 0.0038383 8759 20230619_1880_Aki_TMTPro18x_K_F1 152.31 109.84 77622 44542 98362 100360 130280 147380 107300 141440 134980 73384 127100 142470 98111 99737 135670 45550 137370 139970 71800 41271 98688 97277 132200 145170 110470 142980 135330 79965 129670 139920 102950 101450 136880 52229 131430 131940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72884000 28485 2337;3778;3779 26755 53531 43211 43211 1 9606 Homo sapiens -0.03944230821377914 VDSLLENLEK Unmodified 1158.6132 0.61321864 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;P07910-4;G3V2D6;B4DQQ2;P07910-3;G3V5V7;Q6PKD2;P0DMR1;A0A0G2JNQ3;A0A0G2JPF8;B7ZW38;B2RXH8;O60812 HNRNPC;HNRPCL1;HNRNPCL4;HNRNPCL3;HNRNPCL2;HNRNPCL1 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 0 0 0 4.33 1.25 1 1 1 62.571 62.6 3 2.308E-05 19496 20230619_1882_Aki_TMTPro18x_K_F3 143.96 104.34 1002200 590190 570920 805850 693410 863600 750220 808900 1170500 1163400 961800 1484900 1650900 1573500 1065900 2403400 1940000 2650300 921760 542860 619150 796330 714880 867270 765820 839630 1161700 1167200 1029700 1496500 1637900 1663600 1150100 2410800 1852700 2512100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 349250000 28486 2226 26756 53532;53533;53534 43212;43213 43212 2 9606 Homo sapiens 0.04025656232397523 VDSLVGAGPASR Unmodified 1127.5935 0.59348625 4552 Q9HCU0;A0A172Q381;A0A120HV04 CD248 Endosialin yes no 0 0 0 7 0 1 46.289 46.376 2 1.0896E-12 11940 20230619_1887_Aki_TMTPro18x_K_F7 202.96 142.53 87131 72632 82940 81966 75478 81613 83694 85052 113230 124180 127770 123920 135940 108060 118010 141870 144350 143570 80545 66576 84475 82050 79259 82673 84862 87690 114320 123380 130710 125300 137600 113830 121900 142040 137850 136340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72237000 28487 4552 26757 53535 43214 43214 1 9606 Homo sapiens 0.03479325012312984 VDSPTVNTTLR Unmodified 1201.6303 0.63026569 4492 Q9H0B6;Q9H0B6-2;A8MZ87 KLC2 Kinesin light chain 2 yes no 0 0 0 6 0 1 42.483 42.578 2 1.725E-08 10577 20230619_1886_Aki_TMTPro18x_K_F6 175.64 131.29 72610 55277 64306 67636 48432 54629 67589 57094 78154 83659 75935 78085 89728 68885 68654 99663 95773 81404 67047 50725 65797 67134 52115 56302 67359 58921 78981 82953 78612 79222 90120 72999 71844 98542 91274 77564 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67703000 28488 4492 26758 53536 43215 43215 1 9606 Homo sapiens 0.037515768382036185 VDSPTVTTTLK Unmodified 1160.6289 0.62886871 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;H0YJT3;H0YJU9;H0YJL0;H0YG16 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 0 6.5 0.5 1 1 48.279 48.366 2 4.3359E-11 13206 20230619_1886_Aki_TMTPro18x_K_F6 163.64 115.36 85967 55876 65553 89095 79904 73265 83372 85648 104090 89899 100760 116280 108990 89619 91262 132850 126630 116400 79233 51465 68628 86978 81919 75574 84492 86798 104700 91427 103980 115970 110160 95567 95292 131760 120740 110770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65444000 28489 3808 26759 53537;53538 43216;43217 43216 2 9606 Homo sapiens 0.05497942749457252 VDSTTCLFPVEEK Unmodified 1523.7178 0.71776007 3806 Q06210-2;Q06210;A0A6I8PRN4;A0A6I8PTT9 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 0 4 0.816 1 1 1 58.276 58.306 3 0.011767 17655 20230619_1883_Aki_TMTPro18x_K_F4 46.387 30.497 64506 49558 56792 49468 45409 65869 66441 71541 87378 75010 76530 94878 93859 82737 96146 102080 94634 111020 59565 45393 58145 50243 48808 65469 66424 72749 87362 76244 79940 94985 95379 86755 97682 102750 90673 105290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173760000 28490 3806 26760 53539;53540;53541 43218 43218 1 9606 Homo sapiens -0.02315010073175472 VDTCHTPFGK Unmodified 1160.5284 0.52844316 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 7.5 0.5 1 1 42.929 42.972 3 0.0018276 10499 20230619_1887_Aki_TMTPro18x_K_F7 86.898 73.089 159060 135380 155010 164070 159970 188840 143600 159850 182650 173910 187520 186430 206020 166350 169700 214510 204090 204530 147090 124170 157910 163650 165520 188390 147070 165650 184100 175430 192920 188100 207910 174820 175340 214100 194950 194370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 192180000 28491 1853 26761 53542;53543 43219;43220 43219 2 9606 Homo sapiens -0.04539992785180402 VDTILEFSQNMNTK Unmodified 1638.7923 0.792322 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V2S3;A0A7I2V3N0;A0A7I2V4A3;A0A7I2YQX3;C9JKM9;C9J673;A0A7I2V2C5;A0A7I2V3J1;A0A7I2YQP1;A0A7P0Z4B7;F8WF71 XPO1 Exportin-1 yes no 0 0 0 1 0 1 62.941 62.941 3 9.2777E-06 19675 20230619_1880_Aki_TMTPro18x_K_F1 123.28 108.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28492 3228 26762 53544 43221 43221 1 9606 Homo sapiens -0.0015224726178075798 VDTILEFSQNMNTK Oxidation (M) 1654.7872 0.78723662 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V2S3;A0A7I2V3N0;A0A7I2V4A3;A0A7I2YQX3;C9JKM9;C9J673;A0A7I2V2C5;A0A7I2V3J1;A0A7I2YQP1;A0A7P0Z4B7;F8WF71 XPO1 Exportin-1 yes no 0 1 0 7.5 0.5 1 1 60.911 60.948 3 9.8472E-09 18167 20230619_1888_Aki_TMTPro18x_K_F8 150.11 130.9 129670 119640 136770 137950 148450 135650 152540 135210 140760 150790 164450 143990 145800 117020 190130 161200 143030 166580 120050 109650 138500 137840 153070 137450 153220 138650 145050 151310 166780 145670 151390 124000 189810 161670 137460 158080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 318620000 28493 3228 26762 53545;53546 43222;43223 43223 1903 2 9606 Homo sapiens -0.013965511244123263 VDVAVNCAGIAVASK Unmodified 1472.7657 0.76571331 1085 A0A0S2Z410;Q99714;A0A804HHW5;Q99714-2;Q5H928;A0A0S2Z434 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 1 0 1 55.719 55.719 3 1.1192E-05 16705 20230619_1880_Aki_TMTPro18x_K_F1 112.34 91.037 78819 64543 66639 88196 75569 97064 99298 91801 95149 91953 93814 94471 117640 96137 88883 111130 107390 107160 72789 59280 69012 87187 78524 97298 98572 94180 97128 93019 97353 95889 117920 99921 92029 111150 102570 101820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 373530000 28494 1085 26763 53547 43224 43224 1 9606 Homo sapiens 0.04824108637512836 VDVCSTETLK Unmodified 1150.554 0.5539892 4074 Q5VT52-3;Q5VT52;Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes no 0 0 0 4 0 1 47.784 47.825 3 0.0078115 12985 20230619_1883_Aki_TMTPro18x_K_F4 69.979 17.254 83148 69218 76550 70872 83700 96819 86009 80965 101650 79535 85631 88087 93571 79840 87733 106420 105040 100110 76842 63393 78390 71822 86507 95591 87057 83772 101980 80783 88984 88813 95004 84017 90372 106100 100300 95168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78442000 28495 4074 26764 53548 43225 43225 1 9606 Homo sapiens -0.01526563053425889 VDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLR Unmodified 3758.5286 0.52858149 3245 O15511;B1ALC0;O15511-2;Q6IPM3 ARPC5 Actin-related protein 2/3 complex subunit 5 yes no 0 0 1 1 0 1 57.684 57.684 4 0.003045 17545 20230619_1880_Aki_TMTPro18x_K_F1 65.377 63.939 24119 20328 23956 33839 21731 21984 24405 23422 26220 30233 33677 30141 31417 27119 25653 31958 30263 31232 22305 18713 24370 32875 22803 23157 24522 24041 26917 30178 34070 30512 31862 28328 26478 31980 28918 29669 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63146000 28496 3245 26765 53549 43226 43226 1 9606 Homo sapiens -0.2403416547872439 VDVDVPDVNIEGPDAK Unmodified 1680.8206 0.82064524 3815 Q09666;Q6ZQN2 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 3 0 1 58.865 58.894 2 9.0484E-10 17960 20230619_1882_Aki_TMTPro18x_K_F3 153.38 129.09 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28497 3815 26766 53550 43227 43227 1 9606 Homo sapiens 0.007467739191497458 VDVEALENSAGATYIR Unmodified 1706.8475 0.84752869 3327 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;O76094-2;Q71V07;O15302 HEL103;SRP72 Signal recognition particle subunit SRP72 yes no 0 0 0 4 0 1 59.882 59.884 2 4.9204E-14 18237 20230619_1883_Aki_TMTPro18x_K_F4 208.82 151.33 28553 22270 30817 32381 29550 37581 33734 32842 33671 47295 41027 40076 46634 41130 40799 47424 51466 49058 26411 20472 31115 31924 30931 37477 33782 34259 34676 46789 41988 41040 47158 42732 42213 47628 49123 46587 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120570000 28498 3327 26767 53551 43228 43228 1 9606 Homo sapiens 0.022378825303349004 VDVEGPDVNIEGPEGK Unmodified 1652.7893 0.78934511 3815 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 0 3 0 1 54.025 54.077 3 7.1151E-06 15956 20230619_1882_Aki_TMTPro18x_K_F3 108.34 97.067 30156 21111 24964 23545 29898 32457 31612 33506 41563 34498 31901 36546 41777 31858 35389 45109 39389 41268 27819 19362 25858 23711 30736 32172 32073 34163 41394 34887 33646 36856 42006 33727 36373 44871 37661 39230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110820000 28499 3815 26768 53552 43229 43229 1 9606 Homo sapiens -0.010937991150058224 VDVEVPDVSLEGPEGK Unmodified 1667.8254 0.82539626 3815 Q09666;Q8N274 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 3 0 1 60.502 60.531 3 1.9266E-09 18624 20230619_1882_Aki_TMTPro18x_K_F3 138.39 124.23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28500 3815 26769 53553 43230 43230 1 9606 Homo sapiens 0.0181965806189055 VDVFREDLCTK Unmodified 1380.6708 0.6707503 1053 A0A384NQ35;A0A0K0K1L8;Q06323-3;Q06323;Q06323-2;Q6FHU3 PSME1 Proteasome activator complex subunit 1 yes no 0 0 1 5.5 0.5 1 1 52.094 52.17 3 0.0025278 14875 20230619_1886_Aki_TMTPro18x_K_F6 82.437 67.405 518240 505950 557300 533710 514590 585600 592670 635770 616770 707720 699870 760270 753760 689380 631480 881370 901190 976720 480080 463240 562130 537840 539920 589550 594170 647760 630820 712700 716870 767120 762400 723550 660570 887090 860170 926410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 435560000 28501 1053 26770 53554;53555 43231 43231 1 9606 Homo sapiens -0.0043582483365298685 VDVGKDQEFTVK Unmodified 1363.6983 0.69834526 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 1 6 0.816 1 1 1 49.35 49.43 3 2.5495E-05 13641 20230619_1886_Aki_TMTPro18x_K_F6 125.54 92.453 893010 720610 795100 854510 1165200 1250100 1231700 995130 1090200 1050600 1322700 1042700 985270 814750 1302400 824590 801130 531970 824930 660920 821990 856970 1182100 1228300 1232900 1036100 1127200 1058700 1330200 1051600 1030300 848010 1288400 814100 769500 509360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1182300000 28502 3484 26771 53556;53557;53558 43232;43233 43232 2 9606 Homo sapiens 0.031044016982150424 VDVIFCDK Unmodified 994.47937 0.4793677 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 6 0 1 57.575 57.644 2 0.0055352 17159 20230619_1886_Aki_TMTPro18x_K_F6 120.07 77.047 87265 70868 90519 89843 75453 88115 92317 94487 95606 109190 108730 109140 127870 103840 104880 133820 127060 136050 80713 65039 91456 89174 80032 89370 92263 96480 97817 109530 111770 110660 128780 108910 108440 134020 121420 129170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280730000 28503 1601 26772 53559 43234 43234 1 9606 Homo sapiens -0.01809281074122282 VDVIQEPGLSGR Unmodified 1268.6725 0.67246486 4498 Q9H1E5 TMX4 Thioredoxin-related transmembrane protein 4 yes yes 0 0 0 4 0 1 49.399 49.434 2 1.6021E-05 13721 20230619_1883_Aki_TMTPro18x_K_F4 168.22 135.1 196930 150070 181990 222600 160660 203830 198510 189390 197710 202680 226910 217190 224350 173100 197790 218980 214450 221740 181910 138000 186070 218450 169780 207070 197990 194960 202610 204520 231250 218390 227650 182520 202630 219420 205080 210560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 292950000 28504 4498 26773 53560 43235 43235 1 9606 Homo sapiens 0.04887552246600535 VDVTEQPGLSGR Unmodified 1256.6361 0.63607935 4510 Q9H3N1;G3V448 TMX1 Thioredoxin-related transmembrane protein 1 yes no 0 0 0 3.5 0.5 2 2 43.575 43.628 2;3 8.0543E-06 11093 20230619_1883_Aki_TMTPro18x_K_F4 110.98 97.014 200320 179350 186510 218420 282970 289720 262670 237530 380030 306200 341750 347270 333030 287080 302160 390830 360540 336970 185230 164480 192250 218220 285800 286440 269430 248140 378760 307280 352020 348750 338820 303450 311520 387820 344230 320710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 553170000 28505 4510 26774 53561;53562;53563;53564 43236;43237;43238 43238 3 9606 Homo sapiens 0.018026753498816106 VDWLTEK Unmodified 889.45453 0.45453316 2105;3883;543 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;B4DNH2;J3KSZ0;J3QL43;B4DKP9;J3KTN0;J3QL52;Q14240;Q14240-2;E7EQG2;Q9NZE6;B4DJX6;Q96B07;P38919;A0A024R8W0;I3L3H2 EIF4A1;EIF4A2;EIF4A3;DDX48 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed no no 0 0 0 6 0.816 1 1 1 57.298 57.36 3 0.0058537 16988 20230619_1886_Aki_TMTPro18x_K_F6 104.21 27.31 111550 78008 94440 110350 93411 129530 118620 109360 149120 137050 120170 142830 150930 136710 110290 170760 159320 165130 102930 71721 97484 108970 98081 128970 119030 113890 149070 137270 126110 144490 151260 142980 115900 170550 152000 156880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 169730000 28506 2105;3883;543 26775 53565;53566;53567 43239;43240 43240 2 9606 Homo sapiens 0.0053840711480006576 VDYFIASK Unmodified 941.48583 0.48583328 1890 F8WF48;Q3KR08;A0JLN5;R9WWI7;D3DNQ1;Q99442;F8WCJ7 SEC62;TLOC1 Translocation protein SEC62 yes no 0 0 0 4.5 3.5 1 1 56.815 56.844 2;3 0.016287 16487 20230619_1888_Aki_TMTPro18x_K_F8 69.954 45.998 152520 118800 144600 149220 140900 177000 171400 169790 201740 168340 191610 197020 195800 174780 193770 210020 205370 227550 140930 109040 147570 148570 147680 176640 171990 173920 203250 171150 197310 198020 199680 182860 197820 211420 196540 215860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100640000 28507 1890 26776 53568;53569 43241;43242 43242 2 9606 Homo sapiens 0.01274980148900795 VDYSGGFEPFSVLR Unmodified 1571.762 0.76200815 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2;Q05D78 MRE11A Double-strand break repair protein MRE11A yes no 0 0 0 8 0 1 62.935 62.96 2 0.0014571 19070 20230619_1888_Aki_TMTPro18x_K_F8 120.55 95.63 78449 55126 70492 77181 71832 82367 70605 65828 94824 81018 83819 80322 100860 83432 87334 99677 89540 101470 72414 50677 72324 76162 74564 82499 72010 68834 94781 81119 87230 81725 101740 86841 89238 99969 85733 96310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93152000 28508 229 26777 53570 43243 43243 1 9606 Homo sapiens -0.0010023786467172613 VEADRPGK Acetyl (Protein N-term) 912.46649 0.46649483 3564;3963 P38159;P38159-2;H3BT71;H3BR27;P38159-3;H3BNC1;A8K8A6;O75526;Q96E39;Q2VIN3;A0A1B0GUK8 RBMX;RBMXL2;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA-binding motif protein, X-linked-like-2;RNA binding motif protein, X-linked-like-1 no no 1 0 1 1.5 0.5 1 1 34.109 34.137 2 0.021614 7629 20230619_1880_Aki_TMTPro18x_K_F1 52.403 33.672 355050 190570 404320 422590 620830 664110 495870 561170 575160 369510 520170 548810 570150 505190 523200 236540 641490 596580 327970 176590 409980 410330 624160 650330 509760 574980 578640 389600 538700 547080 578290 508760 537680 263180 612320 562990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1785399999.9999998 28509 3564;3963 26778 53571;53572 43244;43245 43244 2 9606 Homo sapiens 0.0067602385800000775 VEAFLITMEK Oxidation (M) 1195.6159 0.61586118 1507 P14735;A0A7I2V610;A0A3B3ISG5;A0A7I2V2P6;A0A7I2V3E3;A0A7I2YQV5;Q59GA5;P14735-2;B3KSB8;B7Z7W6;A0A7I2V3K9 IDE Insulin-degrading enzyme yes no 0 1 0 7 0 1 60.704 60.747 3 0.058957 18138 20230619_1887_Aki_TMTPro18x_K_F7 40.154 21.409 20250 15133 19176 17078 17898 19935 17624 17155 22061 21475 21398 20680 23771 21001 23590 25313 25915 26209 18706 13878 19534 17134 18697 19883 17932 17833 22204 21457 22089 21050 24186 21881 24129 25413 24775 24883 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11779000 28510 1507 26779 53573 43246 43246 1006 1 9606 Homo sapiens 0.02587788365713095 VEAGLGSGPCR Unmodified 1101.5237 0.52369213 4399 Q96T76;Q96T76-8;Q96T76-9;Q96T76-5;H0Y746 MMS19 MMS19 nucleotide excision repair protein homolog yes no 0 0 0 5 0 1 39.236 39.328 2 1.3455E-16 9256 20230619_1885_Aki_TMTPro18x_K_F5 264.3 238.4 43473 36971 34670 38509 38112 41189 42308 40219 58101 57559 50545 59552 70616 56787 37405 81196 87283 71079 40141 33862 36026 38816 39470 41451 42887 41622 58039 57320 53106 60279 69900 59958 41605 80496 82918 67678 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102910000 28511 4399 26780 53574 43247 43247 1 9606 Homo sapiens -0.023008769279385888 VEAIDVEEAK Unmodified 1101.5554 0.55536941 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 1.5 0.5 1 1 50.446 50.472 3 0.00010796 14663 20230619_1881_Aki_TMTPro18x_K_F2 128.52 105.86 45627 35354 42663 47871 44356 54404 46066 45943 71390 62999 58665 82749 82912 80007 54420 114230 102190 118210 42153 32475 43647 47381 46086 54305 47121 47990 70807 63405 61976 83026 82636 84379 58812 114260 97420 112170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134170000 28512 471 26781 53575;53576 43248 43248 1 9606 Homo sapiens 0.008653943069930392 VEAKPEVQSQPPR Unmodified 1463.7732 0.77324153 755 Q9UN86;Q9UN86-2;A0A024RDE5;A0A024RDB2;A8K6V7;A0A7I2YQD9;A0A7I2V3P9;A0A7I2V3E2;A0A7I2V647;A0A7I2V382;A0A7I2V3Z6;A0A7I2V547 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 1 5.5 0.5 1 1 37.77 37.854 3 2.2941E-06 8662 20230619_1886_Aki_TMTPro18x_K_F6 139.3 122.87 448940 359480 419370 415350 446480 479470 477840 455900 603230 594720 610650 536120 580940 469890 486000 650680 647890 509250 414840 329630 428840 415850 462610 479580 483830 471030 607770 591910 624200 545020 589350 496390 505680 642600 617370 485690 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 776240000 28513 755 26782 53577;53578 43249;43250;43251 43251 3 9606 Homo sapiens 0.05990584229448359 VEAMLNDR Oxidation (M) 962.44913 0.4491302 1165;255 A0A218KGR2;P05067;P05067-8;P05067-11;E9PG40;A0A140VJC8;P05067-4;A0A0A0MRG2;P05067-9;P05067-7;P05067-6;P05067-10;B4DGD0;B4DJT9;B4DQM1;H7C0V9;B4DM00;P05067-3;P05067-5;B4DMD5;B4DTV1;B4E3I5;A0A024R3N3;A0A140VJE9;Q06481-5;Q06481-4;Q06481-2;Q06481-3;Q06481-6;Q06481 APP;APLP2 Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31;Amyloid-like protein 2 no no 0 1 0 2 0 1 37.367 37.427 2 0.011699 8667 20230619_1881_Aki_TMTPro18x_K_F2 93.162 69.394 25772 24109 28881 30732 30979 29710 29215 32781 37114 30616 37132 38144 34639 30320 32220 33900 39674 38459 23876 22117 29115 30482 31932 30202 29821 33218 37337 31289 37990 38118 35329 31721 33225 34261 37879 36485 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24319000 28514 1165;255 26783 53579 43252 43252 149 1 9606 Homo sapiens -0.0335963973931257 VEAMLNDR Unmodified 946.45422 0.45421558 1165;255 A0A218KGR2;P05067;P05067-8;P05067-11;E9PG40;A0A140VJC8;P05067-4;A0A0A0MRG2;P05067-9;P05067-7;P05067-6;P05067-10;B4DGD0;B4DJT9;B4DQM1;H7C0V9;B4DM00;P05067-3;P05067-5;B4DMD5;B4DTV1;B4E3I5;A0A024R3N3;A0A140VJE9;Q06481-5;Q06481-4;Q06481-2;Q06481-3;Q06481-6;Q06481 APP;APLP2 Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31;Amyloid-like protein 2 no no 0 0 0 3 0 1 46.695 46.774 2 0.062676 12665 20230619_1882_Aki_TMTPro18x_K_F3 65.474 37.949 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28515 1165;255 26783 53580 43253 43253 1 9606 Homo sapiens -0.02115335876703739 VEAPEYIPISDDPK Unmodified 1571.7719 0.77190413 3956 Q1ED39;H3BPL4 KNOP1 Lysine-rich nucleolar protein 1 yes no 0 0 0 3 0 1 56.577 56.614 3 0.08275 17026 20230619_1882_Aki_TMTPro18x_K_F3 46.964 27.224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28516 3956 26784 53581 43254 43254 1 9606 Homo sapiens 0.00888905350029745 VEASSLPEVR Unmodified 1085.5717 0.57168818 1769 Q4G0J3-3;A0A8I5KUI4;Q4G0J3;A0A8Q3SHG9;A0A8Q3SHN7;H0YA82;A0A8Q3SHF1;A0A8Q3SHH4;A0A8Q3WK75;A0A8I5KSZ3;A0A8I5KQG7;A0A8I5KYN2;D6RFF0 LARP7 La-related protein 7 yes no 0 0 0 4 0 1 44.806 44.85 2 0.0043955 11679 20230619_1883_Aki_TMTPro18x_K_F4 108.57 82.493 53552 39896 43729 53738 55506 56171 52525 56250 63727 57794 67630 76692 72794 60271 50620 66088 82589 86534 49415 36651 45467 53145 56644 56622 53489 57506 64432 58900 69458 76413 73095 63048 53711 67412 78739 81960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29449000 28517 1769 26785 53582 43255 43255 1 9606 Homo sapiens 0.032325202637593975 VEAYQWSVSEGR Unmodified 1409.6575 0.65754307 4702 Q9Y263;E5RIM3;H0YBW4 PLAA Phospholipase A-2-activating protein yes no 0 0 0 4 0 1 50.877 50.908 2 2.7863E-07 14397 20230619_1883_Aki_TMTPro18x_K_F4 158.05 139.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28518 4702 26786 53583 43256 43256 1 9606 Homo sapiens -0.030899396213953878 VECEPSWQPFQGHCYR Unmodified 2078.8727 0.87271436 4652 Q9UBG0 MRC2 C-type mannose receptor 2 yes yes 0 0 0 6 0 1 49.008 49.086 3 0.0069074 13530 20230619_1886_Aki_TMTPro18x_K_F6 66.66 58.483 26212 20745 25247 28366 26681 32356 28480 29860 33620 34298 30316 34453 34947 24898 32163 38671 37007 34163 24225 19056 25771 28062 27680 32345 28775 30790 33852 34422 31493 34636 35363 26741 33057 38366 35342 32507 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34386000 28519 4652 26787 53584 43257 43257 1 9606 Homo sapiens -0.12356709210371264 VECTYISIDQVPR Unmodified 1578.7712 0.77119262 897 A0A090N7T9;Q12765;Q12765-2;C9K052;B8ZZP4;C9J7U9;B4DE46 SCRN1 Secernin-1 yes no 0 0 0 5.5 0.5 1 1 54.64 54.712 3 3.7809E-08 15709 20230619_1885_Aki_TMTPro18x_K_F5 160.56 133.77 80574 61349 72801 77252 69162 85080 83805 77974 92111 95343 97958 117390 105160 96377 97698 113100 110340 126900 74413 56314 74587 76808 72609 85256 83908 80646 93627 96091 100690 117400 106800 100970 100270 114110 105570 120320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 318660000 28520 897 26788 53585;53586 43258;43259 43258 2 9606 Homo sapiens 0.004957874293268105 VEDAADSATKPENLSSK Unmodified 1760.8428 0.84283724 3588 P46013;Q70L74 MKI67 Antigen KI-67 yes no 0 0 1 4 0 1 45.195 45.24 4 0.042552 11842 20230619_1883_Aki_TMTPro18x_K_F4 54.288 39.518 37638 29933 33089 34579 33991 40742 36705 38228 46327 47232 57627 57530 62778 48623 45304 46718 67644 60342 34762 27448 34017 34628 35361 40671 37165 39463 47097 47565 58791 57617 63057 50387 47608 47742 64454 57196 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34707000 28521 3588 26789 53587 43260 43260 1 9606 Homo sapiens -0.0071504640309285605 VEDAMLMFDK Oxidation (M) 1213.5359 0.5358963 1613 B4DHE8;A0A6Q8PF05;Q96DH6-2;Q96DH6;B4DM51;Q96DH6-3;A0A6Q8PHP1 MSI2 RNA-binding protein Musashi homolog 2 yes no 0 1 0 3.5 0.5 1 1 60.486 60.502 3 0.01363 18522 20230619_1883_Aki_TMTPro18x_K_F4 63.624 48.934 29242 24350 28545 30569 27728 35368 34477 33046 34221 34110 33007 36380 37124 35119 36834 38860 37223 39546 27037 22343 29065 30421 29077 35333 34362 33952 34839 34488 34138 36781 37769 36450 37494 39028 35627 37545 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17715000 28522 1613 26790 53588;53589 43261 43261 1051 1 9606 Homo sapiens -0.062330212997949275 VEDLFLTFAK Unmodified 1181.6332 0.6332258 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 4.5 3.5 1 1 65.032 65.042 3 0.0046477 19979 20230619_1888_Aki_TMTPro18x_K_F8 72.006 36.782 24334 21271 20480 22196 19704 22135 24256 25270 33521 29254 29322 38123 35519 36639 26133 51341 45762 63471 22481 19481 21125 22354 20678 22469 24477 25707 33451 29634 30601 38263 35683 38608 27970 51942 43718 60092 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40977000 28523 1022;3868 26791 53590;53591 43262;43263 43263 2 9606 Homo sapiens 0.049674519630116265 VEDLTFTSPFCLQVK Unmodified 1782.8862 0.88622238 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3S6H7G3;A0A3Q8ATF5;Q5U8W9;A0A3Q8APW9;A0A3Q8B022;A0A3S6H7Y4;A0A3Q8B027;A0A3Q8BCJ2;A0A3Q8BCI7;A0A3S6H824;A0A3S6H950;A0A3S6H942;Q99873-5;A0A3S6H7K8;A0A3Q8AIS2;A0A3Q8APY3;A0A3S6H960;A0A3Q8B4M4;A0A3S6H8B5;A0A3S6H7X9;A0A3S6H7W7;A0A3Q8B9M7;A0A3Q8AX88;A0A3Q8ATG4;A0A3Q8AIS8;A0A3S6H767;A0A3Q8AM22;A0A3S6H761 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 yes no 0 0 0 8 0 1 63.971 63.994 3 4.6798E-14 19528 20230619_1888_Aki_TMTPro18x_K_F8 178.58 154.02 102900 80893 85605 98666 84014 88344 95960 99999 90276 123800 113960 106040 129400 95953 97498 141450 121820 120000 94991 74220 88444 98060 87689 90413 95942 101980 93415 123210 116400 108180 129970 101770 101290 140070 116300 114210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 437360000 28524 1536 26792 53592 43264 43264 1 9606 Homo sapiens 0.026094718404692685 VEDSTMPIR Unmodified 1046.5066 0.50664508 4054 Q5SSJ5;B0QZK9;B0QZK8;Q5SSJ5-5 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 3 0 1 42.806 42.871 2 5.3419E-05 10849 20230619_1882_Aki_TMTPro18x_K_F3 163.2 124.96 70771 55294 68448 76876 78472 105040 99438 85642 119130 80681 105470 117090 109070 97054 87743 102880 122100 124930 65404 50804 69975 76185 81445 103560 99575 88747 119520 83011 109060 116530 110260 101070 91575 104480 116510 118410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98152000 28525 4054 26793 53593 43265 43265 1 9606 Homo sapiens -0.014747975337513708 VEDSTMPIRR Unmodified 1202.6078 0.60775611 4054 Q5SSJ5;B0QZK9;B0QZK8;Q5SSJ5-5 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 1 5 0 1 36.52 36.611 3 6.2954E-06 8132 20230619_1885_Aki_TMTPro18x_K_F5 152.97 124.77 71788 59893 63064 56876 89961 96953 81785 87726 106500 49576 53226 57969 60576 43373 56361 55887 59743 55914 66321 54820 65157 58267 91140 94808 83654 89177 104810 52504 57474 58001 61365 45914 57567 55966 57102 53121 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63357000 28526 4054 26794 53594 43266 43266 1 9606 Homo sapiens 0.014556541689444202 VEDVEALDR Unmodified 1044.5088 0.50875357 3432 Q59GM9;P11216;B4DSD8;H0Y4Z6;Q8TDG6 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 1 0 1 47.028 47.028 2 0.0028464 13153 20230619_1880_Aki_TMTPro18x_K_F1 102.62 61.192 56355 47021 60382 64072 69971 87988 75615 70192 89450 75577 86617 89694 74676 78961 94661 73439 84583 84749 52148 43183 61193 63586 72158 86704 76319 73090 90166 76572 88544 90015 77637 81448 95232 74607 81027 80374 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61853000 28527 3432 26795 53595 43267 43267 1 9606 Homo sapiens -0.011720455242993921 VEDVEALDRK Unmodified 1172.6037 0.60371659 3432 Q59GM9;P11216;B4DSD8;H0Y4Z6;Q8TDG6 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 1 2.5 0.5 1 1 46.355 46.434 3 0.00017046 12517 20230619_1882_Aki_TMTPro18x_K_F3 121.41 86.849 745180 523130 644250 739080 828670 904440 859650 860130 1061800 942940 1314600 1276700 1131100 1057600 1025000 1258800 1375600 1245000 687660 480950 666260 730500 847430 900790 871200 884010 1079200 958910 1328300 1274200 1156100 1108000 1064800 1260400 1311800 1183100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 634500000 28528 3432 26796 53596;53597 43268 43268 1 9606 Homo sapiens 0.024318879468864907 VEDVSAVEIVGGATR Unmodified 1500.7784 0.77838649 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72;B4DZB4 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 4.67 1.49 2 1 1 1 1 55.051 55.103 3 9.4621E-08 16437 20230619_1882_Aki_TMTPro18x_K_F3 103.88 77.44 47207 37943 40206 47971 40964 53876 45031 42974 64313 48083 50771 44022 51806 46122 48596 53095 53203 52965 43593 34823 41492 47677 42722 53759 45749 44805 63833 48259 52723 44982 52712 47874 49751 53226 50858 50309 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1241200000 28529 769 26797 53598;53599;53600;53601;53602;53603 43269;43270 43269 2 9606 Homo sapiens 0.04802843301399662 VEDVVVSDECR Unmodified 1305.5871 0.58708025 379 G3V4W4;A0A024R649;Q96EK6;G3V5E4 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes no 0 0 0 1 0 1 45.42 45.42 2 1.4568000000000001E-30 12460 20230619_1880_Aki_TMTPro18x_K_F1 280.83 235.75 101880 81020 84142 89145 106870 112490 98162 94046 119150 122410 119180 115000 141910 105330 93796 165210 144060 130920 94056 74262 87308 89680 109010 111600 100120 98100 120290 121990 123180 116860 141770 112160 99390 162910 137260 124760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136140000 28530 379 26798 53604 43271 43271 1 9606 Homo sapiens -0.05348981001361608 VEEAFNCR Unmodified 1023.4444 0.44437918 3637 Q9BW75;Q96CV8;P52888;K7EP46;B4DU96 THOP1 Thimet oligopeptidase yes no 0 0 0 3 0 1 42.42 42.486 2 0.0068469 10699 20230619_1882_Aki_TMTPro18x_K_F3 109.36 92.117 71267 46700 59011 75176 75471 123950 87788 87709 142400 78762 84936 102970 99882 94554 71530 114700 128250 116170 65722 43017 61379 74112 77881 120630 89389 91848 139470 81005 90572 103170 100290 98814 76595 114890 122070 110370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41815000 28531 3637 26799 53605 43272 43272 1 9606 Homo sapiens -0.06640523882072102 VEEEIVTLR Unmodified 1086.5921 0.59208927 861 Q6FGS1;Q53GA0;A0A087WYR3;O43399;O43399-5;O43399-7;Q68E05;O43399-2;O43399-4;O43399-3;A0A087WZ51;Q5J908;O43399-6 TPD52L2;DKFZp686A1765 Tumor protein D54 yes no 0 0 0 2.5 1.12 1 1 1 1 52.32 52.352 2 0.00071918 15443 20230619_1881_Aki_TMTPro18x_K_F2 125.82 78.823 239020 158330 180720 237670 173420 228550 243570 243440 394810 286930 310130 385270 374980 408100 247410 562850 534470 619910 220310 145710 188740 233240 183320 231960 246020 248930 389880 291010 325310 387750 375650 428020 271450 565220 509200 587880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 490760000 28532 861 26800 53606;53607;53608;53609 43273 43273 1 9606 Homo sapiens 0.05225690923566617 VEEHEETFEEK Unmodified 1404.6045 0.60450445 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7;P07197-2 NEFM Neurofilament medium polypeptide yes no 0 0 0 1 0 1 40.428 40.428 3 4.2972E-17 10286 20230619_1880_Aki_TMTPro18x_K_F1 222.18 166.78 503330 381550 474000 451650 308510 383250 232800 231740 313630 534520 912090 1014000 617240 753470 781490 734180 1149800 1118700 464980 350020 481090 449500 332190 389420 242710 255970 338670 538210 895540 998350 648890 783930 811810 759740 1096400 1058600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 614280000 28533 1958 26801 53610 43274 43274 1 9606 Homo sapiens -0.08161362194709909 VEEIAASK Unmodified 845.44945 0.44944778 3788 Q02543;M0R3D6;M0R1A7;B4DM94;M0R117;B4DM74;B4DUV3;B2R4C0;Q53HD3;M0R0P7;Q76N54 RPL18A 60S ribosomal protein L18a yes no 0 0 0 3.5 0.5 1 1 45.909 45.968 3 0.00062584 12116 20230619_1883_Aki_TMTPro18x_K_F4 120.15 76.347 75759 44974 91593 90201 132860 134290 101390 132740 111920 74814 103620 117900 121220 101190 101030 64977 134090 114330 70053 41580 92317 87887 133760 132330 104470 134040 113000 80050 107560 117100 122210 103070 104690 68778 127840 108140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163170000 28534 3788 26802 53611;53612 43275 43275 1 9606 Homo sapiens 0.020541032521919078 VEEISPNIR Unmodified 1055.5611 0.56112349 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;B3KMI9 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 0 3.5 0.5 1 1 44.98 45.039 2 9.1558E-06 11735 20230619_1883_Aki_TMTPro18x_K_F4 175.38 130.98 383910 307180 342770 397980 409420 421530 407800 412480 444620 456410 500410 482230 502510 425510 441500 510650 525540 496560 354630 282000 352920 394680 419810 424320 412490 423210 453210 459650 510730 486600 509930 445270 455030 510830 501820 471890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 261120000 28535 4661 26803 53613;53614 43276;43277 43277 2 9606 Homo sapiens 0.035565376093245504 VEEQEPELTSTPNFVVEVIK Unmodified 2286.1631 0.16310875 2086 A8K651;Q07021;I3L3Q7;I3L3B0 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial yes no 0 0 0 3.33 1.25 1 1 1 63.253 63.281 3 7.3535E-17 19795 20230619_1882_Aki_TMTPro18x_K_F3 167.16 153.7 98515 70572 78508 106210 89175 113250 89866 101120 116580 135510 127330 144840 153040 131440 131250 166180 150560 180310 90870 64925 81754 104330 92021 113630 91434 105040 117830 135370 131360 146130 154360 137880 135120 167110 144070 171000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 397260000 28536 2086 26804 53615;53616;53617 43278;43279;43280 43278 3 9606 Homo sapiens 0.0714737174757829 VEEQGNQMR Unmodified 1089.4873 0.48730662 2790 CON__Q03247 yes yes 0 0 0 2 0 1 31.902 31.965 2 0.0026176 6478 20230619_1881_Aki_TMTPro18x_K_F2 99.013 68.846 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28537 2790 26805 53618 43281 43281 1 9606 Homo sapiens -0.05385753824634776 VEESSWLIEDGK Unmodified 1390.6616 0.6616254 4703 Q9Y266;Q9H2R7 NUDC;NPD011 Nuclear migration protein nudC yes no 0 0 0 3 0.707 1 2 1 58.095 58.115 2;3 2.0734E-17 17620 20230619_1882_Aki_TMTPro18x_K_F3 226.29 196.54 95892 69253 81836 86531 66839 103690 92311 88642 113210 110660 98566 107600 137860 109480 95851 145520 125070 134100 88496 63578 84146 86182 71599 103120 92236 92186 113620 110610 103560 109470 137440 114800 100100 144860 119440 127460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 907900000 28538 4703 26806 53619;53620;53621;53622 43282;43283 43283 2 9606 Homo sapiens -0.018078949183291115 VEETVKHDWDR Unmodified 1412.6684 0.66844211 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7;E9PKD3;A0A0B4J225 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 1 3.5 0.5 1 1 42.635 42.69 4 0.0055548 10728 20230619_1883_Aki_TMTPro18x_K_F4 78.324 61.382 107660 68317 95703 89902 112610 109160 99181 106240 121630 72081 83889 65509 57601 40967 91809 46627 74447 48594 99321 62789 98398 89287 115220 108870 101490 107790 120960 74540 86628 66012 61192 43414 91537 47029 71219 46229 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139040000 28539 682 26807 53623;53624 43284 43284 1 9606 Homo sapiens -0.021385372471058872 VEEVGPYTYR Unmodified 1211.5823 0.58225287 760 A0A1W2PPX5;A0A1W2PQR6;A0A1W2PQB7;A0A1W2PS43;A0A024RDG6;A0A1W2PRS1;Q14108;A0A1W2PPU6;Q14108-2;D6RDG0;A0A1W2PS70;A0A1W2PNX7;A0A1W2PSE4 SCARB2 Lysosome membrane protein 2 yes no 0 0 0 3.5 0.5 1 1 46.198 46.259 2 5.722E-07 12255 20230619_1883_Aki_TMTPro18x_K_F4 213.53 189.58 323840 277450 301840 330160 337830 372550 378150 329860 415420 417090 468580 468810 455860 386700 446340 485170 476590 495780 299370 254420 309190 329640 349180 372590 380000 342440 423190 418460 477760 470860 465190 406790 455930 486450 455840 470710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 443470000 28540 760 26808 53625;53626 43285;43286 43286 2 9606 Homo sapiens -0.015074970817977373 VEFLRPSFTDGTIR Unmodified 1636.8573 0.85730551 3923 Q15223;Q6SYC2;A0A8V8TKI1;Q15223-3;Q15223-2 PVRL1 Nectin-1 yes no 0 0 1 2 0 1 55.336 55.356 3 3.0443E-12 16705 20230619_1881_Aki_TMTPro18x_K_F2 190.44 150.37 100090 84330 86395 85569 60905 67699 92167 93905 101000 117190 120840 113520 128250 101810 121130 140020 124170 138990 92465 77224 88516 86182 66154 70471 91441 94745 103230 117010 123340 115080 130260 107470 123580 139970 118880 131970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 427380000 28541 3923 26809 53627 43287 43287 1 9606 Homo sapiens 0.0643511532634875 VEFMDDTSR Oxidation (M) 1114.4601 0.46008882 2212 B2R4R9;P62857 RPS28 40S ribosomal protein S28 yes no 0 1 0 1.5 0.5 1 1 41.046 41.083 2 0.00056194 10461 20230619_1880_Aki_TMTPro18x_K_F1 125.16 112.53 324690 265430 272220 312130 343690 330590 344690 329880 387560 371700 416740 391070 401610 329190 325720 446740 425890 383320 299830 243410 282160 311640 351130 333070 348770 338230 393530 374010 425260 394280 406750 347750 338740 443140 406220 364910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1280000000 28542 2212 26810 53628;53629 43288 43288 1379 1 9606 Homo sapiens -0.09256282155683948 VEFMDDTSR Unmodified 1098.4652 0.4651742 2212 B2R4R9;P62857 RPS28 40S ribosomal protein S28 yes no 0 0 0 2 0.816 1 1 1 47.654 47.704 2 3.3904E-12 13391 20230619_1880_Aki_TMTPro18x_K_F1 235.15 223.93 493960 407520 434110 462410 436750 521040 506550 495900 580650 580630 558990 522240 656100 487900 484200 671760 620740 575960 456310 373570 446240 463360 455840 521860 508990 510570 586720 580550 578360 531990 658020 514390 503940 666180 592290 548230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2861200000 28543 2212 26810 53630;53631;53632 43289;43290 43289 2 9606 Homo sapiens -0.08011978293075117 VEGDLKGPEIDVK Unmodified 1397.7402 0.74021007 3815 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 3 0 1 50.902 50.973 3 0.067498 14558 20230619_1882_Aki_TMTPro18x_K_F3 52.071 0.34568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28544 3815 26811 53633 43291 43291 1 9606 Homo sapiens 0.0572495738674661 VEGDLKGPEVDLK Unmodified 1397.7402 0.74021007 3815 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 0 0 1 4 0 1 50.887 50.919 3 0.021116 14423 20230619_1883_Aki_TMTPro18x_K_F4 62.088 0 123600 79975 112100 96900 115130 123910 157790 140410 114720 146170 171690 158650 158800 108360 232650 110500 110800 82084 114060 73435 114820 96903 120350 123630 155290 142450 121620 147640 173020 158730 165610 113600 227860 109870 106990 78370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210870000 28545 3815 26812 53634 43292 43292 1 9606 Homo sapiens 0.05724957386769347 VEGELEEMER Unmodified 1219.5391 0.53906742 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 0 1 0 1 50.017 50.017 2 0.00035939 14382 20230619_1880_Aki_TMTPro18x_K_F1 143.39 132.68 59275 45517 51330 48906 49904 68319 64581 55760 70430 70613 72208 77798 81529 74848 70580 89403 85837 94770 54728 41717 52793 49385 52465 67304 64424 58239 71501 70814 74447 78559 82446 78057 72912 89849 82043 89924 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53319000 28546 3549 26813 53635 43293 43293 1 9606 Homo sapiens -0.061920549214164566 VEGELEEMERK Unmodified 1347.634 0.63403044 3549 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4 MYH10 Myosin-10 yes no 0 0 1 1.5 0.5 1 1 50.186 50.212 3 0.0021532 14563 20230619_1881_Aki_TMTPro18x_K_F2 82.505 58.9 204680 168740 193480 202690 207610 221020 208190 224060 246470 232230 261810 245140 258890 215670 236970 281180 254350 244680 189180 154770 197720 202190 214560 222210 211160 228860 249490 234660 267640 247450 263240 226850 242560 279350 243130 232820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 311390000 28547 3549 26814 53636;53637 43294 43294 1 9606 Homo sapiens -0.02588121450230574 VEGFPTIYFAPSGDK Unmodified 1626.793 0.79297392 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 7 0 1 62.756 62.792 3 0.0044081 19097 20230619_1887_Aki_TMTPro18x_K_F7 69.729 64.005 136900 98575 131420 129500 135330 165190 144080 148210 165880 171580 135080 148870 187820 164100 170340 235300 169140 221210 126450 90545 134030 128700 140650 163880 145460 153140 166730 171510 142480 152780 189240 172530 173840 234300 162200 210070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 371060000 28548 909 26815 53638 43295 43295 1 9606 Homo sapiens 0.004649154495609764 VEGFPTIYFAPSGDKK Unmodified 1754.8879 0.88793694 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 1 2 0 1 60.204 60.216 3 1.1227E-05 18710 20230619_1881_Aki_TMTPro18x_K_F2 103.6 82.979 80322 64330 69816 75236 70824 80471 81949 90218 87419 104240 106130 113650 121620 96497 104750 127250 115160 120710 74181 58995 71849 75181 73823 81204 82196 91833 89584 104830 108730 114370 122780 101750 107510 126950 110120 114700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182840000 28549 909 26816 53639 43296 43296 1 9606 Homo sapiens 0.04068848920724122 VEGGTPLFTLR Unmodified 1188.6503 0.65027285 390 A0A024R6C9;P36957;Q6IBS5;P36957-2;Q86TQ8;Q86TW7;Q86SW4;Q16187;B7Z6J1 DLST;E2k Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes no 0 0 0 4.5 3.5 1 1 56.678 56.707 2 9.4784E-12 16435 20230619_1888_Aki_TMTPro18x_K_F8 195.36 162.43 182620 147480 189110 205700 197090 246200 233150 228630 273260 223900 213240 203350 254160 212650 218800 237720 226920 237490 168900 135500 191850 203410 205290 245340 234160 234640 273640 226070 223330 207770 256410 220430 223670 238430 217110 225530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 508930000 28550 390 26817 53640;53641 43297;43298 43298 2 9606 Homo sapiens 0.06349372568843137 VEGHVFPEFK Unmodified 1187.5975 0.597509 1103 O14964;A0A7I2V3F9;A0A7I2V5A3;A0A7I2V3Z1;A0A7I2V6E0;A0A7I2V2K2;A0A7I2V5A2;A0A7I2V3I8;A0A7I2V2D8;A0A7I2V2W5;A0A7I2V2R9;A0A7I2V3J3;A0A0S2Z4R4;A0A7I2V637;B4E1E2;A0A0S2Z4Q4;O14964-2;A0A7I2YQD1;A0A7I2V307;I3L1P5;B4DFP5;A0A7I2V4X6 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 6 0 1 50.843 50.92 3 0.037299 14384 20230619_1886_Aki_TMTPro18x_K_F6 51.092 32.931 65598 54097 53628 48953 53743 56078 58236 55890 75973 43275 44851 47357 50643 38849 62641 54597 52740 50795 60568 49498 55439 50020 55970 56210 58985 56781 75052 44597 47786 47631 52053 41198 62894 54425 50544 48293 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175460000 28551 1103 26818 53642 43299 43299 1 9606 Homo sapiens 0.011214145060193914 VEGIVHPTTAEIDLK Unmodified 1620.8723 0.87228688 55 Q9P0M6;A0A024QZP6;A0A7I2V423;A0A7I2V412;Q9HA11;A0A7I2YQD6;Q5SQT3;A0A7I2V5A9;A0A7I2V633;A0A7I2V3C2 H2AFY2 Core histone macro-H2A.2;Core histone macro-H2A;Histone H2A yes no 0 0 0 5 0 1 53.159 53.231 3 1.9339E-10 15163 20230619_1885_Aki_TMTPro18x_K_F5 146 117.2 46691 37994 40825 53325 42875 58949 44947 50085 47028 47740 46939 57813 55059 45213 38678 59727 67175 80731 43127 34907 42077 52625 44534 58932 45287 51720 47817 48671 48577 57789 55181 47861 41311 60881 64091 76406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186590000 28552 55 26819 53643 43300 43300 1 9606 Homo sapiens 0.0866856240368179 VEGRPGASLPPLDLQALEK Unmodified 1989.0895 0.089490294 332 A0A024R5C5;P11498 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 1 7 0 1 59.293 59.343 3 0.002456 17531 20230619_1887_Aki_TMTPro18x_K_F7 65.423 41.818 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28553 332 26820 53644 43301 43301 1 9606 Homo sapiens 0.13450912886492006 VEGTDGHEAFLLTEGSEEK Unmodified 2046.9382 0.93819419 1626 A0A6Q8PGS9;A0A6Q8PGA3;A0A6Q8PGV8;A0A6Q8PFJ4;O95140;A0A6Q8PGR2 MFN2 Mitofusin-2 yes no 0 0 0 1 0 1 51.978 51.978 3 8.1851E-15 15182 20230619_1880_Aki_TMTPro18x_K_F1 160.43 143.75 23838 17312 25578 27308 23835 28566 27867 32351 34533 32999 35662 39883 40802 28561 35418 33048 37535 42412 22040 15935 25827 26765 25025 28857 28087 32793 34847 33511 36787 39770 41179 30112 36214 33669 35927 40166 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23405000 28554 1626 26821 53645 43302 43302 1 9606 Homo sapiens -0.043397380027045074 VEGTEPTTAFNLFVGNLNFNK Unmodified 2311.1485 0.14846174 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;B3KM80;Q6ZS99;A0A7I2V2S8 NCL Nucleolin yes no 0 0 0 2.5 0.5 2 2 65.046 65.067 3;4 8.1977E-31 20879 20230619_1881_Aki_TMTPro18x_K_F2 216.19 188.99 43120 29551 37512 39310 29168 36057 35479 37104 49960 45867 46295 56420 58231 56596 44214 62499 61615 76248 39788 27154 38457 38855 31199 36721 35871 38079 49932 46228 48246 56789 58457 58672 46272 63420 58886 72221 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1089400000 28555 1658 26822 53646;53647;53648;53649 43303;43304 43303 2 9606 Homo sapiens 0.04533344390165439 VEGTPSDPNPNDPR Unmodified 1493.6746 0.6746497 1403 A0A804HIS0;A0A384MDS7;Q96IJ6;Q96IJ6-2;A0A0U1RRC2 GMPPA Mannose-1-phosphate guanyltransferase alpha yes no 0 0 0 2 0 1 36.928 36.989 2 0.0001647 8498 20230619_1881_Aki_TMTPro18x_K_F2 128.81 88.766 15249 9591.2 13668 16623 18670 18516 16577 13463 21517 21137 18738 19515 22327 19491 19017 19076 22483 21117 14068 8845.4 14106 16214 18937 18462 16976 14320 21547 20915 19516 19868 22523 20089 19585 19294 21468 20040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19966000 28556 1403 26823 53650 43305 43305 1 9606 Homo sapiens -0.05244063806253507 VEGVVCK Unmodified 789.40547 0.40547447 3420 P09455;A0A0A0MQT0 RBP1 Retinol-binding protein 1 yes no 0 0 0 6.5 1.12 1 1 1 1 44.035 44.103 2 0.043535 11238 20230619_1886_Aki_TMTPro18x_K_F6 94.262 39.737 170520 100410 226750 201510 256980 263800 267610 318520 279580 167700 260600 293020 243340 237390 288190 119260 303470 302300 157830 92835 225970 195980 264460 263070 269720 317400 282860 181410 267880 289680 251250 240520 292130 132570 290200 285190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 455330000 28557 3420 26824 53651;53652;53653;53654 43306 43306 1 9606 Homo sapiens 0.0023479555420635734 VEHEEMPEAK Oxidation (M) 1213.5285 0.52850274 3151 J9JIC5;Q9HAS0;Q8NI83 C17orf75;OK/SW-cl.19 Protein Njmu-R1 yes no 0 1 0 2 0 1 33.074 33.132 3 0.013097 6922 20230619_1881_Aki_TMTPro18x_K_F2 62.303 54.078 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28558 3151 26825 53655 43307 43307 1828 1 9606 Homo sapiens -0.0697203757583793 VEHNQSYSQAGITETEWTSGSSK Unmodified 2525.1306 0.13063942 668 A0A024RBE7;P42167 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 0 0 0 4 0 1 46.548 46.591 3 1.1592E-08 12423 20230619_1883_Aki_TMTPro18x_K_F4 108.5 104.6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28559 668 26826 53656 43308 43308 1 9606 Homo sapiens -0.0709206739338697 VEHSDLSFSK Unmodified 1147.551 0.55095274 1986 H0YLF3;F5H6I0;A6XND9;B4E0X1;A6XMH4;P61769 B2M Beta-2-microglobulin;Beta-2-microglobulin;Beta-2-microglobulin form pI 5.3 yes no 0 0 0 4.5 0.5 1 1 43.93 43.991 3 0.00060923 11220 20230619_1885_Aki_TMTPro18x_K_F5 90.913 36.305 98681 71134 85333 109830 110020 117140 119560 118920 124310 136610 141400 149430 141190 104180 93075 134180 139240 135650 91077 65462 88325 107750 112560 117900 120130 121840 127120 137430 144240 149520 141730 110610 98265 134320 132750 128840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 355560000 28560 1986 26827 53657;53658 43309 43309 1 9606 Homo sapiens -0.016920701159051532 VEHTPDGVK Unmodified 980.49271 0.49270958 3432 Q59GM9;P11216;B4DSD8 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 3.5 0.5 1 1 35.151 35.203 3 4.0627E-05 7651 20230619_1882_Aki_TMTPro18x_K_F3 148.5 98.459 104130 44576 121630 133810 196210 197030 148260 185770 163670 119250 219640 270480 170920 178390 207100 74674 223520 227280 96134 41626 123270 128420 196420 194000 152870 188690 167810 128650 221000 264240 177900 181530 210100 85716 213730 214250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147480000 28561 3432 26828 53659;53660 43310;43311 43310 2 9606 Homo sapiens 0.0016829302948053737 VEIAGPGFINVHLR Unmodified 1520.8463 0.8463469 3650 P54136;P54136-2 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 2 0 1 56.487 56.505 3 5.5056E-29 17210 20230619_1881_Aki_TMTPro18x_K_F2 255.16 235.91 76676 62242 67469 75281 65163 84965 85858 81301 91040 84964 77438 79336 90264 73574 80207 86675 91261 97625 70826 57096 69344 75081 68539 85066 85505 83414 91922 85516 80676 80593 91234 76824 82382 87481 87255 92586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28752000 28562 3650 26829 53661 43312 43312 1 9606 Homo sapiens 0.10675757742751557 VEIATLTR Unmodified 901.52328 0.52328142 3505 P25789;H0YMZ1;H0YN18;H0YL69;B2RDG0;P25789-2 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type yes no 0 0 0 7 0.816 1 1 1 48.01 48.085 2 0.00012833 12697 20230619_1887_Aki_TMTPro18x_K_F7 193.86 99.599 250360 199640 214340 254540 232310 319400 248240 247690 803930 281570 300340 327360 363780 270310 257470 347840 341870 343510 231190 183240 221310 253260 242140 316230 265890 258930 765610 285540 334380 328320 364290 284950 268830 347780 326300 326310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 544710000 28563 3505 26830 53662;53663;53664 43313 43313 1 9606 Homo sapiens 0.06858071414512779 VEILANDQGNR Unmodified 1227.6208 0.62076364 1463 Q53FC7;B3KSM6;B2R6X5;A0A384NKX5;P17066;P48741 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 yes no 0 0 0 3.67 1.49 2 1 1 1 1 43.477 43.542 2;3 3.3393E-17 11023 20230619_1885_Aki_TMTPro18x_K_F5 196.27 0 2154500 1614800 1775400 2004000 2122800 2385000 2212300 2175000 2836800 2581900 2811000 2557500 2899700 2314600 2147500 3218400 3036600 2577900 1988200 1482200 1841800 1996500 2182200 2378000 2244300 2247200 2853000 2587800 2886200 2591600 2920800 2443000 2251800 3180700 2893600 2457000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 9238600000 28564 1463 26831 53665;53666;53667;53668;53669;53670 43314;43315;43316;43317;43318;43319 43318 6 9606 Homo sapiens 0.016058085526992727 VEITYTPSDGTQK Unmodified 1437.6987 0.69873919 274 V9HW78;B2R5M8;A0A024R3Y6;O75874;Q6FIA4;Q0QER2 HEL-216;IDH1 Isocitrate dehydrogenase [NADP];Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 4.5 0.5 1 1 49.151 49.208 3 5.9053E-11 13594 20230619_1883_Aki_TMTPro18x_K_F4 178.1 157.15 213960 160380 187680 186360 183270 197100 193430 192870 237730 197180 277480 284790 268750 261230 265530 323240 322260 325560 197540 147110 192740 186280 191080 198450 195900 197510 240990 201820 282500 284590 274700 273290 273520 323790 307810 309190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 640020000 28565 274 26832 53671;53672 43320;43321 43320 2 9606 Homo sapiens -0.002602233726065606 VELAQLQEEWNEHNAK Unmodified 1936.9279 0.92790427 4506 Q9H307;A8K964 PNN Pinin yes no 0 0 0 4.67 1.25 1 1 1 57.453 57.508 3 4.818E-34 17065 20230619_1886_Aki_TMTPro18x_K_F6 258.16 237.8 151800 133210 137130 151670 146660 173250 161720 167700 181230 179910 165600 162460 189960 160690 180440 208260 179770 196130 140310 122090 140770 151960 152120 173420 162800 171980 183000 180660 171720 165740 192650 168340 183780 207750 172120 186350 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 143070000 28566 4506 26833 53673;53674;53675 43322;43323;43324 43324 3 9606 Homo sapiens -0.0030825614658169798 VELCSFSGYK Unmodified 1188.5485 0.5485099 1864 C9JXB8;A0A994J4A5;C9JNW5;V9HW01;P83731 RPL24;HEL-S-310 60S ribosomal protein L24 yes no 0 0 0 3.67 3.09 1 1 1 55.745 55.773 2;3 1.3004E-13 16028 20230619_1888_Aki_TMTPro18x_K_F8 228.05 188.75 336420 241060 269900 275770 219840 330750 320410 321490 340200 290580 145560 157470 411440 236740 162370 490440 383340 398990 310320 221120 279130 276470 235860 329860 317740 328110 338080 291470 170010 169170 399260 255570 183490 482480 364750 379880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 792110000 28567 1864 26834 53676;53677;53678 43325;43326 43326 2 9606 Homo sapiens -0.03822241845227836 VELDNMPLR Unmodified 1085.5539 0.55392962 1112 Q15233;A0A7I2V535;A0A7I2V5Y7;A0A0S2Z4Z9;A8K525;A0A7I2V4J2;Q15233-2;A0A7P0MRW0;A0A7I2V4K9;A0A7I2V464;A0A7I2V4N2;C9JYS8;C9IZL7;A0A0S2Z4E7;C9J4X2 NONO Non-POU domain-containing octamer-binding protein yes no 0 0 0 4.5 0.5 1 1 52.173 52.222 2 8.4925E-05 14697 20230619_1885_Aki_TMTPro18x_K_F5 173.69 121.83 1048700 859500 914040 990570 869340 1110800 1142600 1082800 1215000 1207600 1034700 1053500 1228700 1011400 1081000 1311300 1227100 1138400 968710 788050 939840 991380 915270 1113300 1138200 1111400 1227100 1209200 1078800 1075200 1240900 1060600 1111100 1302600 1172000 1083500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1848199999.9999998 28568 1112 26835 53679;53680 43327;43328 43328 2 9606 Homo sapiens 0.0145748173724769 VELDTHGCGLR Unmodified 1255.5979 0.5979197 848 B7Z879;Q658K0;Q53FX3;A0A087WXL6;Q9H270 VPS11;DKFZp564P2364 Vacuolar protein sorting-associated protein 11 homolog yes no 0 0 0 3.5 0.5 1 1 40.063 40.112 3 0.023404 9626 20230619_1883_Aki_TMTPro18x_K_F4 58.476 38.69 115030 80640 156530 140420 168680 167460 152190 154250 144480 114200 187450 169490 138580 115480 179910 80391 159140 138200 106590 74337 155610 137200 173490 166920 154290 157460 149100 119240 188120 167710 144870 119110 180500 84932 152320 130730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59620000 28569 848 26836 53681;53682 43329 43329 1 9606 Homo sapiens -0.01965533836414579 VELGHDQR Unmodified 952.47264 0.47264284 4779 yes no 0 0 0 1 0 2 29.131 29.131 3 0.0050022 5662 20230619_1880_Aki_TMTPro18x_K_F1 84.476 43.489 + 29230 16031 33333 31747 49105 44423 36508 40091 44521 30803 50490 49279 46381 39489 43809 26731 52937 43404 27004 14824 33731 30911 49343 43852 37806 40998 45077 32212 51330 48846 47345 40393 44994 28065 50495 41083 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15473000 28570 4779 26837 53683;53684 43330 43330 1 9606 Homo sapiens -0.005494579104833974 VELIHGK Unmodified 794.46504 0.46503826 3873 Q14008-2;Q14008;Q14008-3 CKAP5 Cytoskeleton-associated protein 5 yes no 0 0 0 7.5 0.5 1 1 42.272 42.347 3 0.010575 10229 20230619_1887_Aki_TMTPro18x_K_F7 91.9 48.777 159200 104850 130770 153920 162830 163640 153350 144160 202940 185200 207290 195880 204890 180580 173680 240390 248920 220270 146810 96471 135800 151440 166370 164300 156670 149770 204070 185390 212240 197990 207840 189870 181670 239280 237230 209530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127570000 28571 3873 26838 53685;53686 43331;43332 43331 2 9606 Homo sapiens 0.05958434559909165 VELNALMTDETISNVPILILGNK Oxidation (M) 2512.3458 0.34584092 4052 Q5SQT9;Q9NR31;Q8NG23;Q6FID4;B2R679;Q9NR31-2 SAR1A;SARA1 GTP-binding protein SAR1a yes no 0 1 0 8 0 1 65.519 65.539 3 1.4741E-08 20148 20230619_1888_Aki_TMTPro18x_K_F8 105.06 96.245 5979.7 4564.9 4913.4 5386.2 5669.1 5573.7 6152.6 3022 4363.4 6626.7 6912.1 6364 5999.3 5644.4 5715.5 8995.3 5620.8 7008.9 5518.8 4187.5 5093.5 5372.3 5833.5 5568.3 6115.5 3371.9 4656.7 6495.8 6929.5 6453.5 6140.6 6017.7 5831.3 8864 5388.4 6673.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8994100 28572 4052 26839 53687 43333 43333 2659 1 9606 Homo sapiens 0.1501618281795345 VELPSEEQVSGSQGPSEEK Unmodified 2014.9331 0.93310881 3790;4031 Q5CZB5;Q02952-3;Q02952-2;Q02952 DKFZp686M0430;AKAP12 A-kinase anchor protein 12 no no 0 0 0 2 0 1 49.959 50.018 3 4.1676E-25 14466 20230619_1881_Aki_TMTPro18x_K_F2 212.37 191.02 58405 44295 45737 56809 63161 59208 87161 80222 71559 64761 65751 80994 69237 70088 63061 87864 82364 106350 53884 40668 47863 56385 64750 60183 85942 80100 73532 66742 68013 81119 70367 73566 65446 88954 78785 100730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48856000 28573 4031;3790 26840 53688 43334 43334 1 9606 Homo sapiens -0.03376041865340085 VELPTCMYR Unmodified 1167.5417 0.54165038 71 A0A024QZY1;Q13155;B2R7M3;Q13155-2;F8WCL2 JTV1;AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes no 0 0 0 7.5 0.5 1 1 52.398 52.474 2 0.0032407 14601 20230619_1888_Aki_TMTPro18x_K_F8 98.933 78.233 384420 312020 336660 378980 291350 369820 376660 377540 476120 487040 495600 439680 541200 460430 411080 570080 544720 567820 355080 286230 345610 377140 309150 374770 377970 388090 480270 485010 509000 449560 544840 480150 428570 570490 520050 539260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120120000 28574 71 26841 53689;53690 43335 43335 1 9606 Homo sapiens -0.03541877997463416 VELQELNDR Unmodified 1114.5619 0.56185177 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8;A0A1B0GTT5;Q45VM7;P17661;L7RDA5;Q45VM8;Q45VM6;A5Z217;A0A384NPX1;Q53SB5;Q9H319;A0A7R6M6U0;B4DUI0 VIM;HEL113;DES;tmp_locus_29 Vimentin;Desmin yes no 0 0 0 2.5 1.12 1 1 1 1 46.784 46.834 2 4.0704E-06 13047 20230619_1880_Aki_TMTPro18x_K_F1 205.83 147.66 1408100 1076100 1161100 1045200 2423900 2965200 2028000 1980800 2605900 2322700 2426400 2470000 2669500 2231300 2062700 2602600 2555300 2430500 1299600 985440 1219100 1083100 2411000 2829400 2083900 2098300 2615300 2335500 2508000 2492800 2688100 2329000 2138300 2598500 2439300 2310800 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 14512000000 28575 3414 26842 53691;53692;53693;53694 43336;43337;43338 43336 3 9606 Homo sapiens 0.009153322583642876 VELSPMQK Unmodified 930.48445 0.48445308 1005;1857 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3;A0A8V8TR54;Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 no no 0 0 0 7 0 1 49.172 49.257 2 0.0012724 13243 20230619_1887_Aki_TMTPro18x_K_F7 119.29 62.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28576 1005;1857 26843 53695 43339 43339 1 9606 Homo sapiens 0.016430227884939086 VELSQLR Unmodified 843.48142 0.48141661 3583 P42766;F2Z388;A4D2M5;A0A024R866 RPL35;LOC154880 60S ribosomal protein L35 yes no 0 0 0 6 0.816 1 1 1 45.602 45.683 2 8.3134E-08 11576 20230619_1887_Aki_TMTPro18x_K_F7 157.86 50.19 544930 473790 468320 466150 557220 718240 580240 587430 712990 391980 370130 256670 332260 267790 434330 329920 333950 222340 503490 433710 483600 474930 573580 704020 587520 603620 704200 403270 393700 267620 345120 279190 433700 324940 319720 212730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1760999999.9999998 28577 3583 26844 53696;53697;53698 43340;43341;43342 43342 3 9606 Homo sapiens 0.05341515726001944 VELSTGMPR Oxidation (M) 1004.4961 0.4960804 981 A0A0B4J1Z1;B4DEK2;C9JAB2;Q16629-3;Q16629-2;Q16629-4;Q16629;Q8NB80 SRSF7 Serine/arginine-rich splicing factor 7 yes no 0 1 0 4.5 0.5 1 1 39.184 39.251 2 0.0058502 9198 20230619_1885_Aki_TMTPro18x_K_F5 89.355 67.827 74414 51822 72101 82738 95182 93901 89966 86671 106980 100130 110620 109430 104110 95372 92614 107970 102100 112000 68727 47717 73837 81103 96835 93931 91525 89415 108160 100780 113020 110200 105960 99478 94993 108480 97665 106300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 261740000 28578 981 26845 53699;53700 43343 43343 546 1 9606 Homo sapiens -0.005987801881701671 VELVPPTPAEIPR Unmodified 1416.7977 0.79766537 1768 A0A8I5KSW3;O75964;A0A8I5KT86;A0A8I5KSQ4;A0A3B3ITX4 ATP5L ATP synthase subunit g, mitochondrial yes no 0 0 0 5.5 0.5 2 2 57.167 57.232 2;3 2.8053E-07 16763 20230619_1885_Aki_TMTPro18x_K_F5 150.21 122.38 99818 85987 98970 107370 90282 123010 109900 111610 144850 134810 127300 127490 149260 112210 104790 160810 137320 148180 92323 78886 100560 106870 95232 122880 110750 115410 144900 134820 132340 129280 149460 118880 109450 159930 131140 140840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 842770000 28579 1768 26846 53701;53702;53703;53704 43344;43345 43344 2 9606 Homo sapiens 0.10593844382992756 VELVTGEEDEK Unmodified 1246.5929 0.59287713 3613 P49792;A0A8V8TLN4;A0A8V8TMN6 RANBP2 E3 SUMO-protein ligase RanBP2 yes no 0 0 0 1 0 1 50.117 50.117 3 6.2087E-09 14405 20230619_1880_Aki_TMTPro18x_K_F1 170.52 160.87 41695 39838 35608 44113 39528 53920 47309 40273 58948 48871 49643 54039 65458 51224 42224 66630 69603 71045 38548 36493 36808 44313 41069 53454 47574 42343 59008 49135 52065 54547 65206 53775 44989 66874 66341 67427 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41031000 28580 3613 26847 53705 43346 43346 1 9606 Homo sapiens -0.02055559218047165 VEMLETER Oxidation (M) 1021.475 0.4750106 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 1 0 1 0 1 39.664 39.664 2 0.012272 9946 20230619_1880_Aki_TMTPro18x_K_F1 92.491 73.003 82101 66138 71883 89259 99353 110810 95978 93466 117060 93372 118940 108770 106300 99649 98103 102380 120630 114540 75831 60741 74397 88466 101000 110000 97592 96694 118030 94911 121310 109460 108590 103200 101170 103520 115160 108690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58288000 28581 349;3906 26848 53706 43347 43347 211 1 9606 Homo sapiens -0.03486790287695385 VENACYALK Unmodified 1066.5117 0.51173046 268 A0A024R3V8;Q99598 TSNAX Translin-associated protein X yes no 0 0 0 6.5 0.5 1 1 47.812 47.9 2;3 0.001686 13023 20230619_1886_Aki_TMTPro18x_K_F6 111.65 66.022 123770 110020 117970 125760 114310 138330 121270 115760 149230 132640 143740 146800 146890 129530 145990 165700 166420 172760 114460 100840 120320 125880 119370 138410 122750 120310 150190 133640 147910 147850 149840 136080 149710 166260 159080 163990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145250000 28582 268 26849 53707;53708 43348;43349 43348 2 9606 Homo sapiens -0.0188649367112248 VENCPDELYDIMK Unmodified 1624.7113 0.71129448 2023;3404 A8K379;P07948;B4DQ79;Q6NUK7;P07948-2 LYN Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lyn no no 0 0 0 3.5 0.5 1 1 61.424 61.44 3 0.0017503 18918 20230619_1883_Aki_TMTPro18x_K_F4 75.462 68.423 75522 65833 79067 82770 78820 85427 70634 83786 87568 89234 95300 82582 89440 80176 87012 89427 92283 105930 69889 60398 80024 82237 81679 86152 72300 85822 88585 89687 97069 84103 91377 83298 88832 90632 88339 100390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177980000 28583 2023;3404 26850 53709;53710 43350 43350 1 9606 Homo sapiens -0.07607271296205909 VENFEAAVHFYGK Unmodified 1509.7252 0.72522871 1650 A0A7I2V697;A0A7I2V4T9;A0A7I2V2U2;A0A7I2V5Z3;A0A7I2V588;O43765;B4DEA6;K7EMD6 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 0 0 7.5 0.5 1 1 58.236 58.285 3 3.1074E-12 17089 20230619_1887_Aki_TMTPro18x_K_F7 193.45 138.58 294300 210920 261340 294630 230610 245390 271610 265350 298060 366280 345190 348600 380610 322940 298940 377270 340310 391230 271670 193870 267930 289970 243090 252350 272420 272500 304410 364100 353440 353740 383420 336910 308150 378800 325560 371260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1404200000 28584 1650 26851 53711;53712 43351;43352 43351 2 9606 Homo sapiens -0.009244896905784117 VENFIQK Unmodified 876.47052 0.47051757 3601 P48739;P48739-2;P48739-3;B2R7P6;B3KVT6 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 0 0 6 2.92 1 1 2 51.778 51.835 2 0.0073877 14348 20230619_1888_Aki_TMTPro18x_K_F8 133.79 61.558 1189700 973130 1063300 989340 1134300 1143100 1181700 1277400 1456400 1260400 1338300 1275700 1402200 1159700 1151100 1607200 1568200 1264400 1099100 891240 1091100 1000900 1173700 1148100 1197600 1294600 1463100 1275400 1380700 1291600 1417500 1223400 1200400 1587400 1494300 1205700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 747370000 28585 3601 26852 53713;53714;53715;53716 43353;43354;43355 43355 3 9606 Homo sapiens 0.02734113351709766 VENILLHDR Unmodified 1107.6037 0.60365701 915 A0A096LP25;Q9BUD9;E9PG46;D6W5G0;B7ZLC4;Q2M2I8-2;Q2M2I8 AAK1 AP2-associated protein kinase 1 yes no 0 0 0 5 0 1 47.206 47.282 3 3.1882E-06 12595 20230619_1885_Aki_TMTPro18x_K_F5 147.78 72.535 27701 21332 24241 28437 25746 32723 33335 36672 41758 30907 29496 33989 35539 25941 33245 37716 36561 37789 25579 19592 24972 28188 26880 32833 33421 37022 41547 31646 31139 34095 35952 27665 34054 37699 34957 35887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43872000 28586 915 26853 53717 43356 43356 1 9606 Homo sapiens 0.05415932737537332 VENLFNEK Unmodified 991.49746 0.4974606 2144 X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52;B4DRA9 GTF2I General transcription factor II-I yes no 0 0 0 5.5 0.5 1 1 54.898 54.969 3 0.014385 15837 20230619_1885_Aki_TMTPro18x_K_F5 70.908 41.241 44288 36258 42644 47306 45103 48660 45771 48577 58909 49396 51996 58856 59796 56295 48640 75972 74397 90180 40939 33285 43517 46878 46689 49100 46527 49657 58979 50190 54050 59268 60327 59191 51235 76722 71042 85445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56151000 28587 2144 26854 53718;53719 43357 43357 1 9606 Homo sapiens 0.0013717717223471482 VENPAEVIR Unmodified 1025.5506 0.55055881 632 A0A024RAQ8;Q13426;A0A024RAL0;Q13426-2;A0A024RAP0;Q13426-3 XRCC4 DNA repair protein XRCC4 yes no 0 0 0 3 0 1 44.804 44.877 2 0.00018662 11773 20230619_1882_Aki_TMTPro18x_K_F3 120.99 58.442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28588 632 26855 53720 43358 43358 1 9606 Homo sapiens 0.038805549548897034 VENQENVSNLVIEDTELK Unmodified 2072.0273 0.027343548 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;B4DNY3;B4DNA3;B4DUZ8 CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1 yes no 0 0 0 2.5 0.5 1 1 61.062 61.082 3 5.3457E-14 18873 20230619_1882_Aki_TMTPro18x_K_F3 160.66 144.16 75443 63455 69640 71982 60415 86593 81030 71786 90516 92658 82449 84920 90170 73742 83495 109680 89841 101330 69728 58165 71133 72194 64211 86082 80780 74935 91394 92305 85336 86200 91459 78349 85524 109090 85977 96291 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 492050000 28589 2327 26856 53721;53722 43359 43359 1 9606 Homo sapiens 0.03421096956844849 VENSIPAAGETQNVEVAAGPAGK Unmodified 2208.1022 0.10223983 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DYA2;B4DRG9 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 0 4 0 1 51.676 51.704 3 7.1764E-14 14773 20230619_1883_Aki_TMTPro18x_K_F4 141.78 121.42 26429 23854 26072 28782 22966 26569 26139 28762 26784 28029 26775 34367 33165 24014 31096 32600 33426 30735 24452 21873 26484 28638 24193 27085 26211 29216 27270 28540 27810 34228 33522 25576 31792 32515 31940 29222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91968000 28590 1555 26857 53723 43360 43360 1 9606 Homo sapiens 0.04651279488052751 VEPAVIEAQNAVK Unmodified 1366.7456 0.7456298 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5.5 0.5 1 1 52.774 52.848 3 4.0744E-05 15003 20230619_1885_Aki_TMTPro18x_K_F5 113.99 86.889 40463 33472 47486 37454 51043 66684 47916 46473 60571 58015 61163 74320 127690 69575 54172 76467 92139 106110 37471 30680 47658 37893 52737 64728 48897 49165 61091 58547 65638 74519 124470 72518 58587 78308 87888 100420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75636000 28591 3881 26858 53724;53725 43361 43361 1 9606 Homo sapiens 0.07692680969216781 VEPGLGADNSVVR Unmodified 1311.6783 0.67827852 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 0 3.5 0.5 1 1 45.123 45.183 2 2.3099E-07 11779 20230619_1883_Aki_TMTPro18x_K_F4 181.66 152.97 114080 92671 102540 117800 148810 174230 157240 142750 170820 162260 171990 191550 180200 156680 166490 178860 193600 200180 105390 85052 105960 117580 151230 171130 158380 148530 173310 163870 176910 191870 183050 163940 171100 180540 185020 189880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 601820000 28592 3484 26859 53726;53727 43362 43362 1 9606 Homo sapiens 0.03490650758249103 VEPVGDVVSTRDPVK Unmodified 1595.8519 0.85188578 3588 P46013;P46013-2 MKI67 Antigen KI-67 yes no 0 0 1 5 0 1 46.867 46.943 3 8.2083E-06 12448 20230619_1885_Aki_TMTPro18x_K_F5 118.08 84.922 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28593 3588 26860 53728 43363 43363 1 9606 Homo sapiens 0.07779391743883934 VEPVYFK Unmodified 880.46945 0.46945494 1285 A0A1K0FUB6;Q8WWM9;K7EMC7;K7EIM9 CYGB Cytoglobin yes no 0 0 0 7 0 1 53.362 53.429 2 0.013637 15098 20230619_1887_Aki_TMTPro18x_K_F7 119.57 75.119 86692 71742 79726 77565 63756 69894 80020 80400 108930 97450 75546 76618 127430 90566 68186 188490 137930 132800 80114 65737 81309 77817 67987 71539 80634 81861 108070 96991 81287 79437 125590 98157 74895 184310 131260 126740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43666000 28594 1285 26861 53729 43364 43364 1 9606 Homo sapiens 0.024438989828126978 VEQATKPSFER Unmodified 1290.6568 0.65681479 3963 Q96E39;Q2VIN3;A0A1B0GUK8 RBMXL1 RNA binding motif protein, X-linked-like-1 yes no 0 0 1 6.5 0.5 1 1 40.647 40.727 3 7.4281E-06 9545 20230619_1887_Aki_TMTPro18x_K_F7 144.92 111.51 345730 277920 342770 351240 440950 424980 436640 416250 457010 366240 450830 404110 421960 364410 399390 434110 485360 431210 319630 255070 349930 349690 449570 424070 441060 424520 463810 374120 461290 407570 430630 380840 411430 434890 463180 409790 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 245790000 28595 3963 26862 53730;53731 43365;43366;43367 43367 3 9606 Homo sapiens 0.023112657295769168 VEQATKPSFESGR Unmodified 1434.7103 0.71030693 3564 P38159;P38159-2;H3BT71;B4E352;H0Y6E7 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 0 0 1 7 0.816 1 1 1 40.876 40.956 3 5.1152E-07 9863 20230619_1886_Aki_TMTPro18x_K_F6 144.55 110.96 676330 514150 634660 676360 794860 804740 798330 773960 820120 804650 798630 745170 923380 652030 725210 808640 834360 690720 624790 472170 650800 671330 812430 803400 805330 793540 833810 809730 825390 756240 928160 684440 747340 803360 796260 657830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4406700000 28596 3564 26863 53732;53733;53734 43368;43369;43370 43368 3 9606 Homo sapiens 0.010340184414189935 VEQATKPSFESGRR Unmodified 1590.8114 0.81141795 3564 P38159;P38159-2;H3BT71;B4E352;H0Y6E7 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 0 0 2 8 0 1 36.908 36.894 4 2.2544E-08 8246 20230619_1888_Aki_TMTPro18x_K_F8 150.12 109.4 38301 35044 39416 35375 51891 41411 45171 44469 43633 39943 49763 41646 46458 33151 44715 41544 47265 34698 35450 32080 40090 35816 52589 41548 45899 45091 44773 40653 50574 41953 47388 34936 45617 41248 45111 33075 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37399000 28597 3564 26864 53735 43371 43371 1 9606 Homo sapiens 0.039644701441147845 VEQFVHK Unmodified 885.47085 0.47085192 1008 A0A0C4DGP0;Q9UKF7-2;Q9UKF7 PITPNC1 Cytoplasmic phosphatidylinositol transfer protein 1 yes no 0 0 0 7.5 0.5 1 1 44.311 44.362 3 0.057833 11239 20230619_1888_Aki_TMTPro18x_K_F8 52.867 20.932 57345 42022 46335 49096 57636 57306 59125 54169 67230 52688 71210 65792 68809 61447 59473 68998 79981 79753 52907 38550 48166 49117 58997 57277 59763 55535 68116 53764 72722 66107 69899 63924 61823 69788 76325 75637 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46635000 28598 1008 26865 53736;53737 43372 43372 1 9606 Homo sapiens 0.023535330715731106 VEQHVVDGK Unmodified 1009.5193 0.51925868 4728 Q9Y3I0;B4DNA0 RTCB tRNA-splicing ligase RtcB homolog yes no 0 0 0 3.5 0.5 1 1 37.121 37.164 3 0.0006538 8446 20230619_1882_Aki_TMTPro18x_K_F3 104.79 69.284 51278 30672 71830 65346 101680 98870 74205 90183 88148 59545 90422 104630 70362 69836 90983 33974 106110 99921 47493 28385 71645 63530 102370 97186 76904 91858 88983 63206 91921 102860 73509 71313 92660 38598 101340 94230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69854000 28599 4728 26866 53738;53739 43373;43374 43373 2 9606 Homo sapiens 0.014879819208204026 VEQIEAGTPGR Unmodified 1155.5884 0.58840088 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 0 3.5 0.5 1 1 41.059 41.109 2 1.4566E-08 10050 20230619_1882_Aki_TMTPro18x_K_F3 178.54 157.08 214960 123050 155750 180060 205150 295630 175690 210610 378850 277900 270820 374320 404450 352350 192970 383110 511790 481010 197940 113290 164080 178490 209560 287950 185050 222670 370040 280590 289120 374600 398990 365880 218530 389360 486380 455940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 405890000 28600 682 26867 53740;53741 43375;43376 43375 2 9606 Homo sapiens 0.016830211497108394 VEQIPYGER Unmodified 1089.5455 0.54547343 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1;F8VU51;H0YI23;B4DMQ9 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 0 3.5 0.5 1 1 43.283 43.339 2 0.012428 10985 20230619_1883_Aki_TMTPro18x_K_F4 80.755 40.688 61345 49155 49166 56539 66464 69997 68548 68418 86305 73057 75927 85464 87095 75539 69773 93550 97056 90086 56624 45071 51265 56673 67753 69739 69513 70119 86485 73993 78925 85863 87760 79177 72887 93457 92550 85626 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63597000 28601 3610 26868 53742;53743 43377 43377 1 9606 Homo sapiens 0.0042825109228488145 VEQLGAEGNVEESQK Unmodified 1615.7689 0.76894402 4715 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 0 0 0 2.5 1.12 1 1 1 1 46.123 46.173 3 7.940799999999999E-19 12379 20230619_1882_Aki_TMTPro18x_K_F3 202.92 186.26 501380 389470 477260 494720 573760 637120 591720 573820 625970 639640 680760 654320 745440 594580 589590 714860 750700 653630 463280 357500 488430 492790 588850 631940 596640 592260 638190 643390 698410 661780 751170 621740 611810 712710 716040 621830 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1578099999.9999998 28602 4715 26869 53744;53745;53746;53747 43378;43379;43380;43381 43381 4 9606 Homo sapiens -0.014309697747648897 VEQMFQILLDPEEK Unmodified 1717.8597 0.85967328 1311 A0A1W2PNX8;Q9H3U1-2;Q9H3U1;B4DLE6;B4DZL0 UNC45A Protein unc-45 homolog A yes no 0 0 0 6 0 1 66.214 66.257 3 0.0032674 20863 20230619_1886_Aki_TMTPro18x_K_F6 59.862 49.008 6314.5 4676 5744.9 5511 5869.6 6273.5 6020.7 6507.2 6897.9 8952.9 6705 8565 7012.6 7913 8442.4 7316.8 7328.8 9164.9 5831 4289.9 5883 5509.7 6091.7 6293.1 6091.8 6693.4 6984.9 8901.2 6919 8675.7 7227.5 8147.6 8492.6 7470.5 7035.6 8678.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17875000 28603 1311 26870 53748 43382 43382 1 9606 Homo sapiens 0.029457829491548182 VEQNSEPCAGSSSESDLQTVFK Unmodified 2398.0594 0.059448312 4239 Q8N806;B2RDC9;E9PCJ7;Q05DA8 UBR7 Putative E3 ubiquitin-protein ligase UBR7 yes no 0 0 0 2 0 1 54.97 54.992 3 3.4411E-08 16588 20230619_1881_Aki_TMTPro18x_K_F2 101.94 93.23 12877 13091 12376 14533 9777.2 14936 15654 15491 14252 16161 12742 15538 16882 13538 15870 18996 18239 15802 11921 11990 12595 14566 10545 15078 15400 15806 14555 16271 13351 15729 17049 14318 16302 18814 17411 15051 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10303000 28604 4239 26871 53749 43383 43383 1 9606 Homo sapiens -0.08365903422327392 VEQQPDYR Unmodified 1033.4829 0.48287317 1289 P55196-5;A8MQ02;P55196;P55196-1;H0Y8U8;A0A804HJ20;A0A1P7ZIN0;G1UI22;J3KN01;P55196-2;P55196-6;P55196-3;Q5TIG5;H0Y7R8;Q96C95 MLLT4 Afadin yes no 0 0 0 2 0 1 34.444 34.501 2 0.047591 7485 20230619_1881_Aki_TMTPro18x_K_F2 71.379 50.478 9304.3 6193.8 12295 15764 12930 16862 11916 14606 15104 13547 19303 19445 14721 17477 15742 12073 19203 19589 8616.3 5748.2 12274 15121 13371 16890 12187 15049 15357 13931 19407 19398 15253 17792 16159 12655 18342 18524 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23125000 28605 1289 26872 53750 43384 43384 1 9606 Homo sapiens -0.03252894975912568 VEQVLSLEPQHELK Unmodified 1647.8832 0.88318591 3352 Q53XM7;O95292;E5RK64;O95292-2 VAPB Vesicle-associated membrane protein-associated protein B/C yes no 0 0 0 5.5 0.5 1 1 54.649 54.721 3 2.3927E-12 15727 20230619_1885_Aki_TMTPro18x_K_F5 190.18 160.85 222230 201040 245430 232930 181440 223580 215920 233750 232650 260650 270070 261580 289300 239640 279350 312180 290730 301730 205810 184270 246350 232620 194570 227020 216470 238800 237690 261920 276160 264900 294120 251780 285060 311860 278140 286650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2756100000 28606 3352 26873 53751;53752 43385;43386 43385 2 9606 Homo sapiens 0.08515964777984664 VESEQHGDRLPR Unmodified 1421.7011 0.70113922 3295 O75165;B3KN02 DNAJC13 DnaJ homolog subfamily C member 13 yes no 0 0 1 3 0 1 28.679 28.791 4 2.4123E-09 5172 20230619_1882_Aki_TMTPro18x_K_F3 174.24 142.89 10370 11213 11628 13667 15659 16842 11877 15292 16930 10743 14309 11289 12453 11502 12386 10793 14890 13962 9618 10277 11778 13639 15848 16754 12359 15598 16835 11131 14701 11459 12775 11822 12724 11041 14216 13231 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4795800 28607 3295 26874 53753 43387 43387 1 9606 Homo sapiens 0.007156698757626145 VESEQQYFEIEK Unmodified 1527.7093 0.70930387 3440 P12270;P12270-2;Q58F23;Q504U6;Q5SWX9 TPR Nucleoprotein TPR yes no 0 0 0 2 0 1 55.537 55.557 3 0.029688 16820 20230619_1881_Aki_TMTPro18x_K_F2 52.576 32.48 33320 27555 37948 32975 29223 36332 34406 32662 43681 39548 40354 37296 43797 35542 37234 46242 44702 54701 30847 25273 38005 32916 31218 36396 34691 33810 43834 39550 41682 37929 44275 37316 38443 46735 42767 51829 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31620000 28608 3440 26875 53754 43388 43388 1 9606 Homo sapiens -0.033442407181382805 VESGGPGTSAASAR Unmodified 1245.5949 0.59494282 4438 Q9BU76;Q9BU76-4 MMTAG2 Multiple myeloma tumor-associated protein 2 yes no 0 0 0 4 0 1 32.194 32.255 2 6.3953E-09 6422 20230619_1883_Aki_TMTPro18x_K_F4 167.2 154.57 7773.5 3954.2 13927 11978 17726 17672 10289 14917 13869 10123 16683 18070 16465 15562 16494 4271.6 16171 18730 7218 3689.2 13674 11497 17889 17360 10940 15288 14026 10736 16985 17876 16817 15550 16685 5325.7 15494 17627 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11173000 28609 4438 26876 53755 43389 43389 1 9606 Homo sapiens -0.018030856895620673 VESLDVDSEAK Unmodified 1190.5667 0.56666238 3605 P49321;Q53H03;Q6PJY7;P49321-2;Q5T626;Q5T624;O95138;E9PI86 NASP Nuclear autoantigenic sperm protein yes no 0 0 0 1.5 0.5 1 1 49.17 49.17 2 6.6707E-34 14061 20230619_1881_Aki_TMTPro18x_K_F2 245.5 199.82 23903 16299 20585 21571 19702 24921 20936 21565 30531 32112 32144 40675 36613 32562 23031 52591 46983 55930 22054 14976 21181 21391 20621 24860 21341 22546 30642 32150 33133 40634 36622 34908 25148 52609 44783 53054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15116000 28610 3605 26877 53756;53757 43390;43391 43391 2 9606 Homo sapiens -0.020998283895323766 VESLEQEAANER Unmodified 1373.6423 0.64228694 1165 A0A218KGR2;P05067;P05067-8;P05067-11;E9PG40;A0A140VJC8;P05067-4;A0A0A0MRG2;P05067-9;P05067-7;P05067-6;P05067-10;B4DGD0;B4DJT9;B4DQM1;H7C0V9;B4DM00;P05067-3;P05067-5 APP Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes no 0 0 0 1 0 1 46.686 46.686 3 3.9074E-11 12978 20230619_1880_Aki_TMTPro18x_K_F1 166.04 147.9 22489 15378 17409 17309 18965 21301 22281 21363 27125 25274 29375 25168 28199 24992 25718 32308 28575 29764 20735 14107 18132 17383 19687 21241 22419 21920 27435 25339 29949 25581 28707 26165 26391 32187 27321 28292 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50039000 28611 1165 26878 53758 43392 43392 1 9606 Homo sapiens -0.029588512092232122 VESLESQTR Unmodified 1047.5197 0.51965261 3273 O60271;O60271-4;O60271-2;O60271-3;O60271-5;A0A060L980 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 0 2.5 0.5 1 1 39.98 40.043 2 0.002239 9803 20230619_1881_Aki_TMTPro18x_K_F2 108.3 53.59 164070 109030 165000 164940 188870 221420 177230 187960 240630 183480 215410 197340 198460 176100 196760 180690 231960 210730 151540 100350 167900 162640 194200 218720 181360 194150 240340 186250 221320 199040 203100 182610 201950 183260 221450 199910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109140000 28612 3273 26879 53759;53760 43393 43393 1 9606 Homo sapiens -0.0022064315000989154 VESLSQVEVILQHSAADIAR Unmodified 2164.1488 0.14879609 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;Q8TAS6 LAMB1 Laminin subunit beta-1 yes no 0 0 0 7 0 1 63.395 63.427 3 7.9888E-37 19405 20230619_1887_Aki_TMTPro18x_K_F7 189.47 162.99 74271 65754 77361 80520 68679 86750 75650 85717 97740 87432 88266 97197 104290 88213 102610 119240 90581 109720 68735 60306 78224 80196 72325 87198 76603 87665 97940 88586 91787 97964 105840 92911 103810 118750 86916 104240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 379760000 28613 3015 26880 53761 43394;43395 43395 2 9606 Homo sapiens 0.11328764110021439 VESPGTYQQDPWAMTDEEK Oxidation (M) 2225.9423 0.94229329 2670 B7SBB1;O00170;D0EKE4;A5JGZ4;A0A804HKH9;D0EKE6;D5LTB3;C8CK04;C8CHN4;C0JXB8;D0EKE5;C0JXB9;C8CK05;A0A804HJ38;A0A804HIX8;D2CVN5;E9PMH2;V9GYQ3;A0A804HKK3;A0A804HKL7;A0A804HJ46;A7KS94;A3RDS1;A7KS93 AIP AH receptor-interacting protein yes no 0 1 0 2 0 1 53.36 53.388 3 1.1453E-14 15927 20230619_1881_Aki_TMTPro18x_K_F2 152.59 136.65 21209 19527 23637 25783 22043 23251 22644 26482 23630 29651 33402 31662 33359 27602 32456 33277 27958 34634 19645 17921 23794 25492 23021 23780 22858 26910 24429 29837 33801 31926 33985 28912 32779 33424 26840 32857 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39682000 28614 2670 26881 53762 43396 43396 1612 1 9606 Homo sapiens -0.12164016571296088 VESPGTYQQDPWAMTDEEK Unmodified 2209.9474 0.94737867 2670 B7SBB1;O00170;D0EKE4;A5JGZ4;A0A804HKH9;D0EKE6;D5LTB3;C8CK04;C8CHN4;C0JXB8;D0EKE5;C0JXB9;C8CK05;A0A804HJ38;A0A804HIX8;D2CVN5;E9PMH2;V9GYQ3;A0A804HKK3;A0A804HKL7;A0A804HJ46;A7KS94;A3RDS1;A7KS93 AIP AH receptor-interacting protein yes no 0 0 0 2 0 1 57.362 57.379 3 3.315E-12 17551 20230619_1881_Aki_TMTPro18x_K_F2 146.76 139.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28615 2670 26881 53763 43397 43397 1 9606 Homo sapiens -0.1091971270866452 VETCGCAEGYAR Unmodified 1371.5547 0.55473426 2164 A8MY26;B7Z606;A8MTY9;O14972-2;O14972 DSCR3 Down syndrome critical region protein 3 yes no 0 0 0 3 0 1 37.508 37.562 2 9.1074E-13 8594 20230619_1882_Aki_TMTPro18x_K_F3 205.53 190.33 29150 26032 26100 25852 34682 32690 33746 34263 38722 37947 37360 40456 44350 33281 30571 43515 46429 43898 26947 23829 26890 26236 35287 32602 34229 34979 39133 38224 38706 40710 44374 35129 32273 43545 44252 41700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24716000 28616 2164 26882 53764 43398 43398 1 9606 Homo sapiens -0.11618091675995856 VETFSGVYK Unmodified 1028.5179 0.51786169 3703 P62081;A0A2R8Y623 RPS7 40S ribosomal protein S7 yes no 0 0 0 5.33 3.09 1 1 1 52.257 52.308 2 6.3279E-12 14482 20230619_1888_Aki_TMTPro18x_K_F8 228.39 119.38 935890 725370 783560 840040 831890 1087900 980000 960650 1249100 743210 726470 558680 737960 584920 816510 772140 715410 523140 863940 665240 810000 842230 866380 1077900 987280 984190 1234800 758390 769580 577470 756390 612380 823010 759280 684140 500230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2169800000 28617 3703 26883 53765;53766;53767 43399;43400;43401 43401 3 9606 Homo sapiens 0.004743478320506256 VETFSSLK Unmodified 909.48075 0.48074791 2733 C9J0I9;Q86WB0;Q86WB0-3;Q86WB0-2;A4D1L4 ZC3HC1;NIPA Nuclear-interacting partner of ALK yes no 0 0 0 8 0 1 52.511 52.588 2 0.00030932 14658 20230619_1888_Aki_TMTPro18x_K_F8 130.28 58.045 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28618 2733 26884 53768 43402 43402 1 9606 Homo sapiens 0.022386762862993237 VETGSEPGDTEPLELGGPGAEPEQK Unmodified 2522.166 0.16602187 874 Q9Y4L1;A0A384P5T6;A0A087X054;B7Z2N4;B7Z766;B7Z4E6 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 1 0 1 54.34 54.34 3 1.4446E-13 16143 20230619_1880_Aki_TMTPro18x_K_F1 131.56 116.32 9062.7 5795.9 6220.7 10533 10471 13128 8869 11804 16633 9384.4 9098.9 16548 14563 14277 9104.8 16470 15310 29733 8346.9 5348.4 6647.2 10265 10534 13033 9270.2 12081 16191 9847.9 9971.5 16383 14455 14927 9742.4 17227 14688 28048 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11322000 28619 874 26885 53769 43403 43403 1 9606 Homo sapiens -0.034174496561718115 VETGVLK Unmodified 744.43815 0.43815481 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;Q504Z0;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q16577;Q6P082;A0A4D5RAB8;Q14222;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1;EEF1A Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 5.5 0.5 1 1 45.725 45.807 2 0.0062285 12000 20230619_1886_Aki_TMTPro18x_K_F6 134.66 40.5 665440 340480 447520 541330 481530 640390 526870 566650 1084800 712790 709230 1140900 1444000 1328700 466750 1414200 2088000 2327800 612210 313990 473900 531050 501360 637790 545420 587990 1058100 727120 778920 1144800 1406900 1369900 586390 1467400 1983800 2200400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1581199999.9999998 28620 1560;3997 26886 53770;53771 43404;43405 43405 2 9606 Homo sapiens 0.05571325948710637 VETGVLKPGMVVTFAPVNVTTEVK Oxidation (M) 2530.3717 0.37166174 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;Q53G89;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q8IUB0;Q504Z0;Q9NZS6;Q6P4C9;A0A4D5RAR2;Q96CD8;Q8TBL1;Q96C29;B4E2C5;Q6P082;A0A4D5RAB8;Q14222;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;EEF1A Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 1 1 2 0 1 61.36 61.371 4 1.1538E-05 19141 20230619_1881_Aki_TMTPro18x_K_F2 95.835 87.235 93935 90391 88571 78753 108390 88388 117650 64314 96388 85095 99718 104010 103880 84211 83221 151970 101270 113860 86913 82640 90637 80706 110950 88282 117300 68112 99500 85521 102370 104190 104910 91034 86381 149260 96811 108500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4167199999.9999995 28621 1560;3997 26887 53772 43406 43406 1023 1 9606 Homo sapiens 0.16769077060189375 VETPLEEAIK Unmodified 1127.6074 0.60740498 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;A0A8V8TR41 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 2.5 0.5 1 1 55.727 55.758 3 0.00046109 16674 20230619_1882_Aki_TMTPro18x_K_F3 104.22 61.886 134540 101130 113530 118200 112270 118030 120200 130950 137840 151950 135610 122230 151990 135180 126130 161350 135160 138420 124180 92768 117060 118010 116950 119700 121340 133390 139480 151520 139850 125940 153410 140380 129410 160350 129260 131700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130400000 28622 2297 26888 53773;53774 43407 43407 1 9606 Homo sapiens 0.048705577207556416 VETTEDLVAK Unmodified 1103.571 0.57101948 3563 P38117-2;P38117 ETFB Electron transfer flavoprotein subunit beta yes no 0 0 0 2.5 0.5 1 1 49.634 49.702 3 0.00032578 13988 20230619_1882_Aki_TMTPro18x_K_F3 111.61 89.521 179640 139100 162500 140650 185230 192550 211180 205640 253500 154590 196630 153350 159750 156430 159360 187700 199730 187490 165920 127420 166720 142770 191290 191140 212640 207740 253140 159130 202510 156140 164410 162840 164440 188020 190620 178120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 325300000 28623 3563 26889 53775;53776 43408 43408 1 9606 Homo sapiens 0.023376808240300306 VETYLNENLR Unmodified 1249.6303 0.63026569 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 5 0 1 51.927 52.001 2 1.3335E-06 14650 20230619_1885_Aki_TMTPro18x_K_F5 174.8 120.09 37099 34556 37580 44792 38495 49429 48212 47776 53841 66298 66121 72996 76199 66349 61478 65342 74798 85715 34338 31706 38209 44441 40226 49573 48226 49416 55082 66195 67739 73518 76761 68635 63531 66809 71513 81156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82897000 28624 4191 26890 53777 43409 43409 1 9606 Homo sapiens 0.015435768382076276 VEVDMEK Unmodified 848.39497 0.39496937 1435;156 Q969G3;A0A2U3TZQ7;B4DGM3;A0A2R8Y855;A0A2R8Y4T4;A0A2R8Y7I9;A0A2R8Y7U4;J3QKS7;A0A2R8Y765;A0A024R1S7;Q969G3-5;Q969G3-6;Q969G3-3;Q969G3-2;Q969G3-4;A0A2R8YES3;P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;A0A994J5C5;A0A994J5Y2;A0A994J7T3;Q96D47 SMARCE1;NSF SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1;Vesicle-fusing ATPase no no 0 0 0 3 0 1 46.92 47 2 0.006312 12769 20230619_1882_Aki_TMTPro18x_K_F3 109.86 37.629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28625 156;1435 26891 53778 43410 43410 1 9606 Homo sapiens -0.03529231890877327 VEVERDNLAEDIMR Oxidation (M) 1703.8148 0.81484835 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8 VIM;HEL113 Vimentin yes no 0 1 1 2 0.816 1 1 1 45.469 45.522 3 3.4028E-05 12519 20230619_1880_Aki_TMTPro18x_K_F1 113.11 76.814 764470 655160 810840 691570 1448700 1385700 1112600 1080400 1114900 1081600 1198600 916460 990160 808670 1219100 958510 861380 832390 707450 600120 828520 704790 1443300 1342200 1141200 1123900 1139400 1088200 1215300 935100 1027200 845770 1214500 954770 827420 792050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2449500000 28626 3414 26892 53779;53780;53781 43411;43412 43411 2026 2 9606 Homo sapiens -0.00890647864184757 VEVERDNLAEDIMR Unmodified 1687.8199 0.81993373 3414 P08670;V9HWE1;Q53HU8;B0YJC4;B3KRK8 VIM;HEL113 Vimentin yes no 0 0 1 2.5 1.12 1 1 1 1 51.283 51.319 3 9.491400000000001E-29 14855 20230619_1880_Aki_TMTPro18x_K_F1 251.87 211.15 703170 627830 708400 559200 1056300 1168800 1016300 973720 1078400 1047100 983280 817340 951750 771640 1064000 900550 812120 755390 650610 574230 723710 579060 1068500 1131400 1028500 1009200 1091800 1047600 1011200 838930 977100 804490 1065100 895480 779070 719220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5707900000 28627 3414 26892 53782;53783;53784;53785 43413;43414;43415 43413 3 9606 Homo sapiens 0.003536559984468113 VEVGKDQEFTVDTR Unmodified 1621.7948 0.79476484 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 1 4 0 1 46.984 47.026 3 0.0011811 12625 20230619_1883_Aki_TMTPro18x_K_F4 117.48 103.76 144150 110360 137620 151070 134030 157490 182500 167440 171070 197190 189970 172870 203080 154980 185140 200140 183190 164070 133190 101390 140420 149280 140810 158940 180820 171180 175800 196880 194500 176050 205840 162890 188540 198350 175160 156290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86741000 28628 3299 26893 53786 43416 43416 1 9606 Homo sapiens 0.00873924467487086 VEVGLSSCQGDYIR Unmodified 1581.7457 0.74570615 3272 Q5SQH4;O60231;A0A1U9X7L7;A0A1U9X7L6;Q9P186;Q5SQH5;A0A140T8Y5 DBP2;DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 yes no 0 0 0 5 0 1 50.731 50.806 2 3.2127999999999997E-28 14088 20230619_1885_Aki_TMTPro18x_K_F5 247.3 213.1 23018 17338 21976 21601 17949 24460 25287 23351 25752 28758 22989 22791 29412 25475 23873 33770 28456 29306 21266 15914 22357 21506 19193 24480 25083 24076 26127 28595 23997 23510 29561 26627 24681 33523 27188 27880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54176000 28629 3272 26894 53787 43417 43417 1 9606 Homo sapiens -0.021896870930731893 VEVGTEVTDYR Unmodified 1266.6092 0.6091959 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49;Q59FY4 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 2 0 1 46.481 46.56 2 9.1059E-12 12832 20230619_1881_Aki_TMTPro18x_K_F2 196.27 139.86 99524 83363 86818 91337 73576 71230 80031 82231 89184 104260 106850 93361 115800 87254 80709 131170 105260 95878 91943 76391 89047 91378 77607 73883 80674 83858 91122 103820 109050 95178 116170 92533 84323 128990 100410 91474 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125600000 28630 3833 26895 53788 43418 43418 1 9606 Homo sapiens -0.013444332612834842 VEVNNLNNLNNHDR Unmodified 1663.8026 0.80264418 47 Q6FG68;B2R9B9;A0A024QZM3;Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 yes no 0 0 0 4 0 1 40.29 40.332 3 0.016322 9693 20230619_1883_Aki_TMTPro18x_K_F4 41.117 0 67353 48587 65924 67771 68877 78995 79887 81987 77481 83982 94238 99180 98942 79959 84323 97137 112660 97537 62223 44658 67155 67008 71605 79066 79863 83591 79761 85190 96135 99346 100130 84029 87628 97327 107410 92692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62535000 28631 47 26896 53789 43419 43419 1 9606 Homo sapiens -0.0027050349233377347 VEVNTNSGEIIHK Unmodified 1438.7416 0.74160705 1847 A0A8V8TPV5;A0A8V8TQZ3;Q8WWQ0;A0A8V8TQM4;A0A8V8TPK0;Q9NWP3 PHIP PH-interacting protein yes no 0 0 0 5 0 1 44.872 44.95 3 2.056E-16 11631 20230619_1885_Aki_TMTPro18x_K_F5 215.96 172.33 83469 76157 74689 89640 80595 88543 85395 88334 105490 118970 116400 123610 136330 105710 102600 137170 140290 134350 77170 69813 76779 89404 83424 89638 86466 91078 106860 118710 119790 124660 136870 111340 107190 137070 133820 127660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93933000 28632 1847 26897 53790 43420 43420 1 9606 Homo sapiens 0.03978591475515714 VEVPSSASQAK Unmodified 1101.5666 0.5666028 2309 B2RD09;Q96P11-2 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes no 0 0 0 6 0 1 42.534 42.628 3 0.015826 10607 20230619_1886_Aki_TMTPro18x_K_F6 63.408 47.184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28633 2309 26898 53791 43421 43421 1 9606 Homo sapiens 0.01988216401127829 VEVTEFEDIK Unmodified 1207.5972 0.59723423 1789 A0A8J8YYJ1;Q01105-3;A0A8I5KS71;B2RCX0;A0A024R895;Q5VXV3;A0A0C4DFV9;Q01105-4;Q01105-2;Q01105;P0DME0 SET;SETSIP Protein SET;Protein SETSIP yes no 0 0 0 2.5 1.12 2 2 2 2 58.346 58.358 2;3 1.9691E-13 17742 20230619_1882_Aki_TMTPro18x_K_F3 220.39 166.92 777260 630430 729610 817440 731790 851110 852680 848220 949840 991920 967550 946530 1027000 828600 629680 1034700 602960 1057900 718300 578720 745780 810500 763660 857880 855830 870590 963280 993270 993730 959020 1026800 869870 648310 1036500 580310 1002900 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 6344099999.999999 28634 1789 26899 53792;53793;53794;53795;53796;53797;53798;53799 43422;43423;43424;43425 43424 4 9606 Homo sapiens 0.0017394999551925139 VEYHAGGSTQNSIK Unmodified 1489.7161 0.71612059 1168 Q86U79;A0A140VJE0;P55263-2;P55263;P55263-3;A0A5K1VW54;A0A5K1VW94;P55263-4;A0A5F9ZH31;A0A5F9ZH72;A0A5F9ZH83 ADK Adenosine kinase yes no 0 0 0 6 0 1 38.128 38.203 3 4.7445E-07 8807 20230619_1886_Aki_TMTPro18x_K_F6 136.14 102.93 35977 28604 35611 40455 46929 49428 37744 42249 42804 41163 48430 61642 53571 43073 36422 58916 78969 77204 33258 26285 36396 39975 47592 49130 38770 43627 43558 42272 49716 61002 53732 45906 39806 59889 75133 73142 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56920000 28635 1168 26900 53800 43426 43426 1 9606 Homo sapiens -0.009148830468802771 VEYHFLSPYVSPK Unmodified 1564.7926 0.79257999 1817 A8K6Q8;A0A8V8TLM6;P02786;G3V0E5;A0A8V8TLK7;A0A8V8TLN0;A0A8V8TM46;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 2 0 1 55.684 55.705 4 4.6565E-05 16817 20230619_1881_Aki_TMTPro18x_K_F2 116.01 85.952 54545 44875 50252 46021 39865 49307 39950 37649 38815 46264 37391 36290 48599 38543 34723 51985 40728 37183 50405 41101 51214 46455 42280 49360 40280 39514 39625 45995 38906 37385 48570 40394 35979 51148 38886 35487 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76718000 28636 1817 26901 53801 43427 43427 1 9606 Homo sapiens 0.03277540520366529 VEYSEEELK Unmodified 1124.5237 0.52373493 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356;Q6IC76 XRCC6;G22P1 X-ray repair cross-complementing protein 6 yes no 0 0 0 1.8 0.748 2 2 1 47.974 48.018 2;3 4.5076E-08 13492 20230619_1881_Aki_TMTPro18x_K_F2 200.88 153.03 810460 613130 666400 745620 861510 920620 889540 854740 1025300 988040 1098500 1084400 1147600 960100 940320 1204500 1218400 1092300 747960 562620 692380 744350 880410 916250 899260 881280 1039700 994500 1125400 1092700 1160000 1007200 976590 1199500 1162200 1039100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4629900000 28637 150 26902 53802;53803;53804;53805;53806 43428;43429;43430 43429 3 9606 Homo sapiens -0.033545984469583345 VEYTAEEIATWK Unmodified 1438.698 0.6980109 3395 P07101-3;P07101-4;P07101-2;P07101 TH Tyrosine 3-monooxygenase yes no 0 0 0 5 0.816 1 1 1 61.644 61.679 3 1.2031E-05 18643 20230619_1885_Aki_TMTPro18x_K_F5 133.05 108.2 206600 183000 204180 358910 168800 192980 209600 218670 249130 257540 261390 292740 249000 234220 269000 280450 273770 321640 191120 168840 208000 345290 179330 208090 210300 223030 252080 259180 267350 293470 255630 245920 273530 283360 262230 304890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278900000 28638 3395 26903 53807;53808;53809 43431 43431 1 9606 Homo sapiens -0.003790180216128647 VEYTLGEESEAPGQR Unmodified 1663.7689 0.76894402 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;H7C0V6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 1.5 0.5 1 1 46.989 47.027 3 4.5933E-42 13131 20230619_1880_Aki_TMTPro18x_K_F1 220.4 217.43 233540 183910 233380 221930 266170 258600 293180 271160 291760 262250 276460 247960 270830 215490 304610 263290 252560 234600 215890 168720 237510 221580 274230 259100 293940 275910 296640 265100 284070 251400 278020 225930 306050 262380 242030 223190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 525180000 28639 1676;2901 26904 53810;53811 43432;43433 43432 2 9606 Homo sapiens -0.03638969774760881 VFAETHYPDIYTR Unmodified 1610.7729 0.77290718 3223 O14813;H0YGU5;A0A5A4PVW8;Q99453;A0A455R6J4 PHOX2A;PHOX2B Paired mesoderm homeobox protein 2A;Paired mesoderm homeobox protein 2B yes no 0 0 0 6 0.816 1 1 1 50.349 50.427 3 7.919099999999999E-22 14053 20230619_1886_Aki_TMTPro18x_K_F6 185.9 159.78 162120 136780 152530 182480 193890 231050 190070 197570 380510 181920 204280 216660 202390 192590 208840 225840 225650 262050 149860 125580 156580 181070 198570 229090 197530 203710 369130 186250 217830 217610 207190 201160 213280 228380 215990 248380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 727110000 28640 3223 26905 53812;53813;53814 43434;43435 43435 2 9606 Homo sapiens -0.008048354903849031 VFAETHYPDIYTREELALK Unmodified 2294.1583 0.15829814 3223 O14813;H0YGU5;A0A5A4PVW8;Q99453;A0A455R6J4 PHOX2A;PHOX2B Paired mesoderm homeobox protein 2A;Paired mesoderm homeobox protein 2B yes no 0 0 1 7 0 1 56.469 56.527 4 0.041003 16354 20230619_1887_Aki_TMTPro18x_K_F7 48.883 32.941 45345 45489 51873 49320 53868 47931 49928 52705 43327 47116 55129 42512 46999 37595 64260 49707 50586 49846 42038 41655 52145 49513 55555 48734 50415 53361 44998 47749 55610 43265 49008 39602 64206 49810 48527 47345 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225960000 28641 3223 26906 53815 43436 43436 1 9606 Homo sapiens 0.06298532395567236 VFAEVLPSHK Unmodified 1125.6182 0.61824444 1778 Q04656-3;Q04656-2;A0A8J9FM07;A0A8I5KXV0;Q04656-5;Q04656;A0A8I5KWA8;E7ET55;B7ZLR3;A0A7G8LSD6;Q17RT3;B7ZLR2;F5H748;B7ZLR4;F5H562;A0A669KA36;A0A024RDX3;A0A669KB88;A0A7G8LSD8;A0A8I5QKR3;B4DRW0;Q04656-4;P35670;P35670-4;P35670-3;P35670-2;A0A7G8LSD4 ATP7A;ATP7B Copper-transporting ATPase 1;Copper-transporting ATPase 2;WND/140 kDa yes no 0 0 0 1 0 1 51.629 51.629 3 0.0011992 15004 20230619_1880_Aki_TMTPro18x_K_F1 76.843 49.706 47335 39067 38470 46245 49657 58249 50558 48955 52145 53893 62039 63339 61212 53326 67979 60941 67789 70289 43704 35828 40039 46257 50761 57772 50971 50792 53435 54489 63185 63535 62824 55744 68957 61664 64879 66652 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40375000 28642 1778 26907 53816 43437 43437 1 9606 Homo sapiens 0.060460048857066795 VFAEYPGSSAQLR Unmodified 1423.7096 0.70957864 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 8 0 1 51.916 51.993 2 1.3828E-18 14383 20230619_1888_Aki_TMTPro18x_K_F8 197.21 161.94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28643 2332 26908 53817 43438 43438 1 9606 Homo sapiens 0.014672237923832654 VFANAPDSACVIGLK Unmodified 1560.797 0.79701344 3469 P17858;P17858-2;Q7L2M7;Q9BSP4;B3KNQ7 PFKL ATP-dependent 6-phosphofructokinase, liver type yes no 0 0 0 1.5 0.5 1 1 61.029 61.034 3 2.6428E-06 18883 20230619_1880_Aki_TMTPro18x_K_F1 119.32 100.9 127700 117270 140910 144880 111520 119780 118190 125580 131280 141590 157880 169340 156070 145790 151040 178190 191460 211010 118270 107550 141590 143750 118290 123200 119340 128380 134100 143040 160750 169870 159230 152860 156060 180280 182940 200000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 283050000 28644 3469 26909 53818;53819 43439;43440;43441 43440 3 9606 Homo sapiens 0.039046816715881505 VFANEVNSHR Unmodified 1171.5734 0.57341951 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A0U1RQJ2;A0A494C073 DST Dystonin yes no 0 0 0 6 0 1 37.083 37.151 3 6.1412E-08 8409 20230619_1886_Aki_TMTPro18x_K_F6 160.33 141.55 62702 49407 58089 75364 73634 76991 73763 72305 103140 71045 81442 80960 85155 71508 77639 82573 83445 92800 57930 45444 59729 73936 75285 77603 75236 74185 102440 72247 84730 81445 86441 74676 79431 83359 79849 87999 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41843000 28645 1693 26910 53820 43442;43443 43443 2 9606 Homo sapiens -0.005504259276449375 VFANNADQQLVK Unmodified 1345.699 0.69901396 788 A8K097;A0A024RE04;Q5JVF3-3;Q5JVF3-2;Q5JVF3;Q5JVF3-4;A0A024RDZ9 RP11-98F14.6;PCID2 PCI domain-containing protein 2 yes no 0 0 0 8 0 1 51.868 51.945 2 0.003055 14361 20230619_1888_Aki_TMTPro18x_K_F8 92.062 64.948 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28646 788 26911 53821 43444 43444 1 9606 Homo sapiens 0.03999241137921672 VFAWHPHTNK Unmodified 1235.62 0.61997578 2983 F8VZ44;Q53HS1;Q9NRG9 AAAS Aladin yes no 0 0 0 4 0 1 42.192 42.235 4 3.9292E-07 10499 20230619_1883_Aki_TMTPro18x_K_F4 180.67 147.59 156330 119690 147730 154190 140390 158660 174390 168050 203600 152600 133230 123820 137770 124890 131280 153370 148750 130290 144430 109890 150730 152960 147380 160290 174700 170630 202840 154280 140160 127110 140270 130260 134690 152330 142030 124060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 105090000 28647 2983 26912 53822 43445;43446 43445 2 9606 Homo sapiens 0.011590586943157177 VFCSHCGNK Unmodified 1107.459 0.45898338 2287 Q9ULX3;B2RAR2 NOB1 RNA-binding protein NOB1 yes no 0 0 0 2 0 1 36.132 36.191 3 0.0030602 8173 20230619_1881_Aki_TMTPro18x_K_F2 83.647 73.275 28350 17382 37259 33801 48744 48108 40984 36898 40904 40110 47461 43058 42449 37875 39429 28880 62339 48667 26241 16060 37253 32943 49436 47290 41776 38559 41941 40466 48137 43383 43373 38791 41342 30310 59330 46064 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25365000 28648 2287 26913 53823 43447 43447 1 9606 Homo sapiens -0.09044775005577321 VFCVEEEDSESSLQK Unmodified 1784.7775 0.77745979 3896 Q14684;Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 0 2 0.816 1 1 1 55.061 55.082 3 4.0378999999999994E-19 16394 20230619_1882_Aki_TMTPro18x_K_F3 168.76 155.35 68198 59918 69149 71194 60335 77565 73640 71741 72028 72985 61714 63108 84898 62090 63342 86296 77264 89821 63097 54938 70060 71066 63787 77796 73445 73732 73121 73397 64824 64511 84836 65433 65688 86445 73878 85229 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 384810000 28649 3896 26914 53824;53825;53826 43448;43449 43449 2 9606 Homo sapiens -0.08353783920438218 VFDAIMNFK Oxidation (M) 1099.5372 0.53721693 3447 P13639;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 1 0 2 0 1 62.285 62.295 3 0.0017165 19633 20230619_1881_Aki_TMTPro18x_K_F2 88.948 59.6 142500 103630 117520 139280 129800 155710 127600 147630 173120 160790 147030 158430 195460 168090 138540 267430 204730 211810 131490 95206 121780 137890 134040 155960 130230 151660 172830 161790 154210 161500 195370 178230 146260 263620 195300 201750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 393960000 28650 3447 26915 53827 43450 43450 2095 1 9606 Homo sapiens -0.008570191487024204 VFDAIMNFK Unmodified 1083.5423 0.54230231 3447 P13639;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 0 0 2.5 0.5 1 1 64.233 64.253 2 0.00015746 20217 20230619_1882_Aki_TMTPro18x_K_F3 173.28 120.11 699800 498510 601400 580260 434300 790310 621710 672710 851510 943500 635820 803500 1204600 1171200 262370 2098700 296570 1216500 645810 457370 616850 582160 472510 779770 623210 702080 847420 935420 687160 836740 1167600 1243100 296050 2038900 289800 1161400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 355180000 28651 3447 26915 53828;53829 43451;43452 43452 2 9606 Homo sapiens 0.00387284713929148 VFDAIMNFKK Unmodified 1211.6373 0.63726532 3447 P13639;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 0 1 5 0 1 62.24 62.288 3 0.002014 18956 20230619_1885_Aki_TMTPro18x_K_F5 94.309 68.688 134310 114770 122040 99529 74497 113660 101040 113480 106950 120400 108940 86260 111820 92937 111300 105990 108050 64591 124130 104970 124160 102130 82138 113880 100660 116050 108770 120240 111670 89406 113980 96312 112960 104040 103110 61947 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 282960000 28652 3447 26916 53830 43453 43453 1 9606 Homo sapiens 0.039912181850922934 VFDFAGEEVR Unmodified 1167.556 0.55603812 4659 Q9UEE9;A0A0H5AUJ9;A0A0H5APX3;Q9UEE9-2 CFDP1 Craniofacial development protein 1 yes no 0 0 0 2.5 0.5 1 1 57.154 57.179 2 1.2536E-05 17281 20230619_1882_Aki_TMTPro18x_K_F3 164.34 140.22 223010 179740 194990 219280 167070 192980 209180 211470 223150 250010 250350 257540 257670 229450 264970 303400 260580 295910 205980 164900 200140 217890 177010 197580 208990 215840 227750 250750 256020 260220 263150 241460 269310 303160 249610 281010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 293800000 28653 4659 26917 53831;53832 43454;43455 43455 2 9606 Homo sapiens -0.021037662532762624 VFDFTFSPEEMK Oxidation (M) 1491.6592 0.65918256 3450 V9HWI0;P14550 HEL-S-165mP;AKR1A1 Alcohol dehydrogenase [NADP(+)] yes no 0 1 0 5 0.816 1 1 1 62.82 62.854 3 0.0002954 19396 20230619_1886_Aki_TMTPro18x_K_F6 95.094 83.989 64159 46073 64234 67821 79302 87746 77501 85836 103390 72732 80083 84210 83173 72797 88896 85544 80590 97124 59281 42375 65497 66943 81174 87136 79042 87432 102850 74612 83445 84601 85075 76146 89825 86418 77303 92065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135230000 28654 3450 26918 53833;53834;53835 43456 43456 2097 1 9606 Homo sapiens -0.06698066647663836 VFDFTFSPEEMK Unmodified 1475.6643 0.66426794 3450 V9HWI0;P14550 HEL-S-165mP;AKR1A1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 6 0 1 63.914 63.96 2 1.2649E-12 19901 20230619_1886_Aki_TMTPro18x_K_F6 227.94 190.75 32142 26929 33096 25771 24971 35258 33279 36797 35085 28972 34870 38274 36938 32240 38124 36851 37125 43992 29732 24649 33385 26287 26858 34959 33154 37257 35600 29983 35912 38237 37693 33700 38686 37362 35578 41683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47868000 28655 3450 26918 53836 43457 43457 1 9606 Homo sapiens -0.05453762785032268 VFDGIPPPYDK Unmodified 1246.6234 0.6233894 1419 A0A7I2V5L3;Q9BSQ6;Q53H34;A0A384ME37;M0QYS1;P40429;A0A7I2V2L9;Q5QTS3;Q8J015;Q0VGL3;Q6NVV1 RPL13A;RPL13a;RPL13AP3 60S ribosomal protein L13a;Putative 60S ribosomal protein L13a protein RPL13AP3 yes no 0 0 0 7 0.816 1 1 1 58.488 58.542 3 0.012163 17160 20230619_1887_Aki_TMTPro18x_K_F7 66.262 43.384 134770 103780 124370 137070 106800 137120 136130 139230 141260 160890 143570 154220 180650 145770 135000 192940 164550 170520 124490 95303 127040 135680 113270 138640 135770 142670 143870 161190 148860 156600 180990 153150 140040 191700 157200 162170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1718499999.9999998 28656 1419 26919 53837;53838;53839 43458 43458 1 9606 Homo sapiens 0.009942639576365764 VFDKDGNGYISAAELR Unmodified 1753.8635 0.8635131 2325 B2RDW0;P0DP23;B4DJ51;P0DP24;P0DP25;E7EMB3;Q9BRL5;Q96HY3;A0A590UJI2;G3V361 CALM3;CALM2;CALM1 yes no 0 0 1 6.5 0.5 1 1 53.884 53.957 3 6.5576E-08 15339 20230619_1887_Aki_TMTPro18x_K_F7 124.29 105.87 130930 163180 162250 198450 268810 191510 235190 199640 136700 95852 143490 85953 76642 77332 288850 82333 89483 80728 121700 149500 163940 197400 268660 194660 235950 200790 144950 102120 144080 87715 90296 80272 277840 83243 87483 76725 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 448260000 28657 2325 26920 53840;53841 43459;43460 43460 2 9606 Homo sapiens 0.016735887672439276 VFDLLNR Unmodified 875.4865 0.48650199 1621 B0AZS5;A0A6Q8PFA6;A0A6Q8PH57;O00139-2;A0A6Q8PGH7;A0A6Q8PG37;B4DM85;O00139-1;O00139-5;O00139;O00139-4;D6R9M0 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 2 0 1 59.962 59.974 2 0.03362 18603 20230619_1881_Aki_TMTPro18x_K_F2 83.364 43.161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28658 1621 26921 53842 43461 43461 1 9606 Homo sapiens 0.04377819588614784 VFDMLNR Unmodified 893.44292 0.44292261 2105;3883 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;J3KTB5;J3KSZ0;J3QL43;J3QR64;J3QLN6;J3KS25;J3QKZ9;B4E047;Q14240;Q14240-2;E7EQG2;Q9NZE6;B4DJX6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 0 8 0 1 56.436 56.493 2 0.016144 16325 20230619_1888_Aki_TMTPro18x_K_F8 110.34 73.243 215210 164100 177830 205990 165450 246840 223730 211460 292870 216620 183470 178960 216020 175960 199270 218570 217060 199720 198630 150620 183840 205060 175110 245510 224200 218620 289910 217730 194790 183320 218670 183910 204000 217860 207390 189960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107030000 28659 2105;3883 26922 53843 43462 43462 1 9606 Homo sapiens -0.00806113180169632 VFDMLNRR Unmodified 1049.544 0.54403364 2105;3883 P60842;A8K7F6;A8K088;P60842-2;J3KT12;Q59F68;J3QS69;J3KTB5;J3KSZ0;J3QL43;J3QR64;J3QLN6;J3KS25;J3QKZ9;B4E047;Q14240;Q14240-2;E7EQG2;Q9NZE6;B4DJX6 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 1 4.5 0.5 1 1 49.619 49.675 3 0.0011507 13585 20230619_1885_Aki_TMTPro18x_K_F5 119.17 66.007 198720 220650 210840 178400 215860 204700 220450 230510 226560 131580 110730 88313 100880 80631 158560 121530 111940 87952 184260 201540 213010 184350 223610 205880 222220 230980 225620 137060 118640 91535 106000 85604 157430 119720 107390 83981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154140000 28660 2105;3883 26923 53844;53845 43463 43463 1 9606 Homo sapiens 0.02124338522526159 VFDPQNDKPSK Unmodified 1273.6303 0.63026569 2206 Q2LE71;B2R4D5;O15145 ARPC3 Actin-related protein 2/3 complex subunit 3 yes no 0 0 1 7 0 1 45.481 45.567 3 0.028161 11502 20230619_1887_Aki_TMTPro18x_K_F7 60.301 35.084 187690 147740 168810 186760 254250 260310 210190 205820 258140 250870 259730 237910 277770 205700 213440 269390 256100 210990 173360 135600 174420 186290 256110 256440 215920 215170 260450 250810 266960 241120 279670 216670 220820 266290 244310 201190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 222750000 28661 2206 26924 53846 43464;43465 43464 2 9606 Homo sapiens 0.004395768382437382 VFDPVPVGVTK Unmodified 1156.6492 0.64921022 3811 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 3.67 3.09 1 1 1 58.584 58.604 3 0.00088822 17229 20230619_1888_Aki_TMTPro18x_K_F8 91.937 72.839 479100 418430 452870 477380 439600 501760 467700 457040 546750 510760 487560 506010 570990 446120 443000 572890 522890 538750 442990 383520 462160 477670 458710 504610 472480 471540 550320 513290 506680 511910 573840 469010 457850 571380 499640 512010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1498799999.9999998 28662 3811 26925 53847;53848;53849 43466;43467 43467 2 9606 Homo sapiens 0.07715158199948746 VFDVIIR Unmodified 860.51199 0.51198846 1641 P12081;P12081-4;E7ETE2;A0A6Q8PHA5;A0A6Q8PFF2;Q52NV4;A0A6Q8PF47;A0A6Q8PHE3;B4DDD8;B3KWE1;B4DEA2;A0A6Q8PFG9;A0A6Q8PFN6 HARS;HRS Histidine--tRNA ligase, cytoplasmic yes no 0 0 0 1.5 0.5 1 1 59.61 59.617 2 0.025746 18330 20230619_1880_Aki_TMTPro18x_K_F1 97.473 50.809 116250 92398 108490 109810 104340 126320 121420 122940 127440 136430 134410 133100 149740 133470 125190 160280 151840 170200 107420 84751 110810 109710 109260 126390 121660 126170 129840 137050 138230 135340 151240 139090 129400 161080 145150 161480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75790000 28663 1641 26926 53850;53851 43468 43468 1 9606 Homo sapiens 0.07615294111053572 VFDYSEYWEGAR Unmodified 1520.6572 0.65720872 332 A0A024R5C5;P11498 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 61.903 61.953 2 9.7313E-13 18771 20230619_1885_Aki_TMTPro18x_K_F5 204.64 183.26 161790 118090 126600 150510 110780 145930 136160 135430 149920 211270 213390 214360 198620 202000 211980 228840 232840 236790 149230 108430 131460 149240 117290 147630 136320 141140 154700 209460 215360 217010 204040 210060 216570 229940 222600 224800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186650000 28664 332 26927 53852;53853 43469 43469 1 9606 Homo sapiens -0.08229359341271447 VFEDESGK Unmodified 909.40798 0.40797689 3972 Q496C9;Q8TEA8;A0A2R8YCT7;A0A2R8Y6X2;A0A087WZV9 DTD1 D-tyrosyl-tRNA(Tyr) deacylase;D-tyrosyl-tRNA(Tyr) deacylase 1 yes no 0 0 0 2 0.816 1 1 1 45.687 45.74 2 0.0015162 12469 20230619_1881_Aki_TMTPro18x_K_F2 141.39 71.39 121370 60811 138870 152270 141890 164940 143940 151820 150210 133450 198020 238440 160770 166150 178340 80814 229470 214910 112090 56502 139740 146230 147200 165310 145320 155580 154390 139010 199610 234480 166310 169250 183290 90433 218960 202760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172590000 28665 3972 26928 53854;53855;53856 43470 43470 1 9606 Homo sapiens -0.05035077507125152 VFEEDALSWEDK Unmodified 1466.6565 0.65654002 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3 0.816 1 1 1 62.055 62.07 3 0.00011432 19284 20230619_1882_Aki_TMTPro18x_K_F3 109.24 98.449 98142 80452 91844 106910 90577 95602 110040 107750 113310 122700 119310 119080 126670 98189 117450 129460 125830 147220 90702 73870 93897 105630 94663 97815 109940 109670 115550 123040 122460 120350 128550 103720 120130 130540 120460 139570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 230890000 28666 3881 26929 53857;53858;53859 43471 43471 1 9606 Homo sapiens -0.058121987809727216 VFEELQATDK Unmodified 1178.5819 0.58191851 3671 P57740;P57740-2;B3KMK0;P57740-3;H0YG15 NUP107 Nuclear pore complex protein Nup107 yes no 0 0 0 2.5 0.5 1 1 56.096 56.123 3 0.092203 16856 20230619_1882_Aki_TMTPro18x_K_F3 36.528 20.637 86079 69721 89181 92861 83742 99422 91058 96683 107050 113750 119280 120080 132410 111490 105600 137730 133230 132750 79613 64021 90280 91956 87674 99947 91938 99406 108690 114230 122360 121370 133460 116670 109560 137620 127200 126140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26163000 28667 3671 26930 53860;53861 43472 43472 1 9606 Homo sapiens -0.00022916801685823884 VFEGNRPTNSIVFTK Unmodified 1707.8944 0.8944193 1326 A0A1W6AYU6;A0A2U3TZU2;P06744-2;P06744;B4DE36;B4DVJ0;CON__Q3ZBD7 GPI Glucose-6-phosphate isomerase yes no 0 0 1 3.33 0.471 2 1 51.648 51.701 3;4 0.0013555 14751 20230619_1883_Aki_TMTPro18x_K_F4 73.928 37.537 201830 153150 197040 197320 184350 252740 212170 201810 291500 286140 275050 282040 315700 252140 257390 329600 314580 326320 186500 140620 200430 196330 193770 250060 214760 211930 291900 284660 284730 285500 318100 265260 266310 329560 300510 309940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1650899999.9999998 28668 1326 26931 53862;53863;53864 43473;43474 43474 2 9606 Homo sapiens 0.06878786872130149 VFEHIGK Unmodified 828.44939 0.4493882 1490 B4DWK8;A0A384P5Q0;P04040 CAT Catalase yes no 0 0 0 8 0 1 44.807 44.835 3 0.011225 11409 20230619_1888_Aki_TMTPro18x_K_F8 90.862 34.851 82813 51363 59553 65924 88400 109040 89444 82801 182520 85779 107290 114690 95071 100610 101370 104360 121430 132870 76281 47200 62928 65908 89915 106340 92846 86476 177290 87680 113110 114630 97919 104380 104100 106400 116070 125850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120950000 28669 1490 26932 53865 43475 43475 1 9606 Homo sapiens 0.02830148042869496 VFEISPFEPWITR Unmodified 1619.8348 0.83477916 1508 Q9BTT5;A0A3B3ISG8;Q16795;A8K4V2;H3BRM9;F5H0J3 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 2 0 1 65.156 65.163 2 7.5987E-08 20863 20230619_1881_Aki_TMTPro18x_K_F2 199.59 159.32 23253 20957 28378 30321 31627 36520 35283 30858 33633 27055 24555 26796 33448 26016 30183 32089 26113 30087 21555 19254 28469 29916 32677 36313 35297 31829 33996 27558 26036 27195 33681 27193 30536 32034 25051 28584 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54186000 28670 1508 26933 53866 43476 43476 1 9606 Homo sapiens 0.049655159287567585 VFEMSQDK Unmodified 982.44298 0.44298219 3892 Q4ZG57;Q14566;B4DRF6 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 5 0.816 1 1 1 50.409 50.47 3 0.0015366 13968 20230619_1885_Aki_TMTPro18x_K_F5 113.5 74.541 155840 118400 139080 137530 153080 187520 168920 149620 211800 133430 142990 123320 147930 117960 142910 144920 157090 130490 143910 108600 142910 137990 158580 184920 170610 155070 210340 135630 150040 125590 150580 123310 146190 144400 149980 124190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 109410000 28671 3892 26934 53867;53868;53869 43477;43478 43478 2 9606 Homo sapiens -0.04894157970829838 VFESIGK Unmodified 778.4225 0.42250475 2035 Q6FHP5;A8K401;P35232;Q6PUJ7;Q53FV0;C9JZ20;C9JW96;E7ESE2;E9PCW0;P35232-2;Q9BSE8 PHB;HEL-S-54e;ZNF607 Prohibitin yes no 0 0 0 7 0.816 1 1 1 52.474 52.549 2 0.038034 14608 20230619_1888_Aki_TMTPro18x_K_F8 91.626 13.448 278250 223650 224460 217510 285230 269520 318720 270730 317830 277270 321280 285730 348360 286950 313120 335400 343000 303170 256850 204770 233350 221060 292050 268880 319210 276740 323840 280240 330450 290000 352950 298510 320770 334450 327620 288440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2047499999.9999998 28672 2035 26935 53870;53871;53872 43479 43479 1 9606 Homo sapiens 0.024430394316823367 VFETFEAK Unmodified 969.48075 0.48074791 3395 P07101-3;P07101-4;P07101-2;P07101;P07101-6;P07101-5 TH Tyrosine 3-monooxygenase yes no 0 0 0 5.5 0.5 1 1 56.645 56.712 2 0.00021493 16550 20230619_1885_Aki_TMTPro18x_K_F5 169.06 98.794 261390 204970 216990 666680 175940 156020 239440 226710 278770 290490 327160 344030 316760 276800 336210 329820 332010 361670 241300 191170 226120 626920 187540 197530 239010 229610 283650 291670 333120 344480 324550 290530 341280 332400 317910 343070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 466130000 28673 3395 26936 53873;53874 43480;43481 43480 2 9606 Homo sapiens -0.00521323713712718 VFEVNASNLEK Unmodified 1248.635 0.63501672 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;A0A6I8PIT3;B4DER1;A0A6I8PLB8;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRU9;Q6NVI4;Q9P0T1;Q0VGM8 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 55.499 55.568 3 9.1495E-06 16231 20230619_1886_Aki_TMTPro18x_K_F6 143.79 89.318 527670 468390 504260 510140 495900 515150 535020 499140 527390 609520 597290 599200 621990 496920 659890 675890 655700 655370 488000 429110 514040 512080 516480 520500 537110 514140 541010 609560 610870 605350 635570 525580 670210 675130 627410 622690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 293840000 28674 1603 26937 53875;53876 43482;43483 43482 2 9606 Homo sapiens 0.020644609809778558 VFEVSLADLQNDEVAFR Unmodified 1950.9687 0.96870646 3694 Q6NXR8;P61247;D6RG13;A8K4W0;D6RAT0;B7Z3M5;D6RB09;E9PFI5;H0Y8L7;D6RAS7;D6RED7;D6RI02;D6RGE0 RPS3A 40S ribosomal protein S3a yes no 0 0 0 4.5 0.5 1 1 64.451 64.477 3 1.8392999999999998E-59 19938 20230619_1885_Aki_TMTPro18x_K_F5 235.71 209.6 22610 16901 17005 19765 15958 20242 21154 21042 23421 20480 23475 26977 26526 21580 20235 29418 27508 27640 20853 15504 17746 19734 16834 20447 21097 21433 23721 20926 24234 26915 26678 22848 21140 29309 26251 26271 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 159310000 28675 3694 26938 53877;53878 43484;43485 43485 2 9606 Homo sapiens 0.03126085172993953 VFFEQSK Unmodified 883.44397 0.44396847 3615 P49916-3;P49916;B7Z6I3;P49916-4;P49916-2;K7ERZ5;K7EQB6 LIG3 DNA ligase 3;DNA ligase yes no 0 0 0 7 0 1 52.245 52.319 3 0.025499 14640 20230619_1887_Aki_TMTPro18x_K_F7 65.803 35.191 27327 24649 26479 24925 24961 30047 28561 26967 33011 28064 27443 26015 31710 22929 26151 30800 27874 27552 25278 22566 26940 25234 26169 29931 28725 27792 33150 28255 28592 26411 31938 24187 26811 30630 26651 26204 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7973500 28676 3615 26939 53879 43486 43486 1 9606 Homo sapiens -0.002415755396100394 VFFTCNACGESVK Unmodified 1517.6643 0.66428471 4620 Q9NX58;A8K3Y5;D6RDJ1 LYAR Cell growth-regulating nucleolar protein yes no 0 0 0 1 0 1 54.929 54.929 3 0.063148 16434 20230619_1880_Aki_TMTPro18x_K_F1 41.996 29.015 18356 14354 15064 20588 21413 21070 21446 22144 31407 19521 20432 24404 24387 20225 20668 23219 21045 24490 16943 13193 15704 20273 21746 21293 21912 22481 30962 20040 21675 24404 24588 21159 21118 23350 20156 23234 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58931000 28677 4620 26940 53880 43487 43487 1 9606 Homo sapiens -0.07384086056686101 VFFYNPTTR Unmodified 1143.5713 0.57129425 1699 A0A7P0T8N8;O14776-2;O14776;G3V220;B7Z921 TCERG1 Transcription elongation regulator 1 yes no 0 0 0 5 0 1 55.674 55.739 2 0.0030659 16166 20230619_1885_Aki_TMTPro18x_K_F5 118.32 89.379 189990 178790 171550 207990 158530 184180 191410 197740 192130 203600 196300 171310 203580 180570 216070 228270 212000 218180 175700 163860 175830 207350 166650 188380 191180 201260 195950 204440 201440 175860 208180 188480 219350 228030 202930 207310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170850000 28678 1699 26941 53881 43488 43488 1 9606 Homo sapiens 0.005251453345408663 VFGAAPLENVVR Unmodified 1270.7034 0.70337105 431 C9JP85;A0A024R770;A0A024R774;Q16656-2;Q16656;Q16656-4 NRF1 Nuclear respiratory factor 1 yes no 0 0 0 1 0 1 58.072 58.072 2 2.2965E-06 17701 20230619_1880_Aki_TMTPro18x_K_F1 145.9 97.143 52139 44620 49267 53435 44581 59745 52663 55051 60017 61566 61150 60128 64294 54914 57770 67718 68217 67920 48204 40919 50253 53323 46991 59805 52879 56731 60789 61828 62816 60942 65221 57498 59490 67827 65167 64509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41120000 28679 431 26942 53882 43489 43489 1 9606 Homo sapiens 0.07884750351513503 VFGFSLITNK Unmodified 1124.623 0.62299547 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;A0A8V8TL37;Q9P1G4 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 0 0 5.5 0.5 1 1 63.148 63.196 3 0.001954 19575 20230619_1886_Aki_TMTPro18x_K_F6 85.862 63.869 315430 290690 275650 279610 247720 244480 253030 277250 276200 192810 192910 191780 156310 156940 181840 245140 287480 178900 291590 265990 282830 283120 259560 250920 255710 278760 276500 199410 200300 193780 162290 167470 190600 241030 273280 171020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 484040000 28680 3373 26943 53883;53884 43490 43490 1 9606 Homo sapiens 0.06566889028476908 VFGGTVHK Unmodified 843.46029 0.46028724 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 2.5 0.5 1 1 41.478 41.548 3 0.00047891 10234 20230619_1882_Aki_TMTPro18x_K_F3 138.54 104.47 169040 105880 149650 161980 168670 180180 171850 171940 247370 216430 213420 234270 241640 199900 157810 258230 292720 252410 155930 97492 153980 159130 173920 180580 175380 177410 246370 216980 221800 235820 241880 210420 169920 257920 278490 239950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 329270000 28681 1182 26944 53885;53886 43491 43491 1 9606 Homo sapiens 0.03229550417131577 VFGIQLK Unmodified 803.49052 0.49052473 599 Q9UNF1;A0A024R9Y7;Q5H907;Q5H909;Q9UNF1-2;B4DX55;B4DWM5 MAGED2 Melanoma-associated antigen D2 yes no 0 0 0 4 0 1 59.663 59.665 2 0.0058656 18177 20230619_1883_Aki_TMTPro18x_K_F4 137.5 80.995 153090 126640 140430 147380 131050 173670 140380 144170 174150 98100 103790 82749 88150 79125 176800 96332 114680 96454 141470 116120 143630 147480 137440 172880 142050 148100 172430 101320 109160 84708 94689 82653 174340 96796 110200 91678 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42229000 28682 599 26945 53887 43492 43492 1 9606 Homo sapiens 0.0809190908232722 VFGNEIK Unmodified 805.4334 0.43340378 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;B3KM80;Q6ZS99;A0A7I2V2S8 NCL Nucleolin yes no 0 0 0 4.83 2.54 1 1 1 1 1 1 49.94 50.001 2 0.0085906 13535 20230619_1887_Aki_TMTPro18x_K_F7 127.12 19.8 7934500 6012600 6381500 7167000 7404700 8197200 7947900 7756700 9008200 8884900 9638400 10205000 10617000 8557500 8091600 11986000 10261000 10222000 7321500 5516200 6632100 7156700 7629900 8201600 8014500 7985600 9143500 8959100 9903100 10248000 10683000 9060800 8414000 11880000 9796700 9727300 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 7399299999.999999 28683 1658 26946 53888;53889;53890;53891;53892;53893 43493;43494;43495;43496;43497 43495 5 9606 Homo sapiens 0.02290441805962473 VFGNEIKLEK Unmodified 1175.655 0.65502388 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;A0A7I2V699;B3KM80;Q6ZS99;A0A7I2V2S8 NCL Nucleolin yes no 0 0 1 1 0 1 52.883 52.883 3 0.013118 15558 20230619_1880_Aki_TMTPro18x_K_F1 68.786 33.898 237360 212180 194230 211130 209440 186660 185200 246000 177210 233710 246590 154180 176050 124230 196560 135690 139650 63942 219270 194230 201120 213200 215420 192220 188220 246660 183970 234150 246050 159280 182560 129810 196020 132430 133640 61770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169720000 28684 1658 26947 53894 43498 43498 1 9606 Homo sapiens 0.07422256711606678 VFGPGIEGK Unmodified 902.48617 0.48616764 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 7.5 0.5 1 1 51.815 51.891 2 0.00077421 14356 20230619_1888_Aki_TMTPro18x_K_F8 138.54 75.703 157940 125390 145310 167270 149500 180730 186240 170250 194670 205910 229200 221880 233620 194810 213630 239700 241070 258960 145920 115150 148900 165610 156060 181430 185890 175670 199230 206670 233690 223680 237320 204270 219250 241150 230510 245690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 107480000 28685 3299 26948 53895;53896 43499;43500 43500 2 9606 Homo sapiens 0.031023998687714993 VFGPGVER Unmodified 859.4552 0.45520186 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 6.5 0.5 1 1 43.363 43.449 2 0.029833 10984 20230619_1886_Aki_TMTPro18x_K_F6 80.229 38.927 92720 77721 91956 94651 95240 104830 108070 104040 138990 117350 118720 114800 115250 99653 113350 129150 124660 127580 85742 71292 93549 94347 99052 105220 109150 106700 138970 117860 122590 116180 117680 104850 116010 129170 119180 121190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87669000 28686 3299 26949 53897;53898 43501 43501 1 9606 Homo sapiens 0.01985246554522746 VFGSCPR Unmodified 821.38541 0.38540773 2312 B2RD51;O95456 PSMG1 Proteasome assembly chaperone 1 yes no 0 0 0 2 0 1 39.132 39.199 2 0.0077445 9415 20230619_1881_Aki_TMTPro18x_K_F2 122.79 97.792 170560 129810 152880 160370 169420 192570 178300 174280 210780 208000 204260 208440 239330 188550 182760 280350 257020 231290 157510 119130 157070 159860 175040 191860 180260 180200 212730 208460 211390 211050 240450 200000 191460 277200 245020 220300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118880000 28687 2312 26950 53899 43502 43502 1 9606 Homo sapiens -0.03242955385746882 VFGWEEDEDF Unmodified 1271.4982 0.49824846 1987 Q9BWD3;Q17RB0;A6ZKI3 FAM127B;FAM127C;FAM127A Protein FAM127B;Protein FAM127C;Protein FAM127A yes no 0 0 0 1 0 1 65.49 65.49 2 0.00061611 20726 20230619_1880_Aki_TMTPro18x_K_F1 119.89 112.29 8751.1 8298.3 8763.8 10419 7035.6 11459 10123 10779 10536 13224 11136 8645.9 10358 10658 10821 10859 12224 12000 8100 7610.9 8891.3 10359 7555 11482 10044 11119 10747 13093 11349 9056.4 10632 10938 11073 10974 11681 11387 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8978400 28688 1987 26951 53900 43503 43503 1 9606 Homo sapiens -0.12664072969391782 VFGWVHR Unmodified 899.47661 0.476606 3265 O43776;K7EIU7;K7EPK2;B4DF91;B4DGT6;O43776-2;K7EMQ6;K7EQ35 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 0 5.67 0.471 1 2 48.012 48.089 3 0.00085152 12915 20230619_1885_Aki_TMTPro18x_K_F5 140.72 105.23 112660 96929 110770 107090 101990 110350 111470 115850 119170 107550 96536 96215 101760 85777 129150 109450 106630 101700 104190 88820 112520 107430 106870 111500 112130 117730 120080 108790 100420 97852 104980 90084 129490 109240 102210 96696 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117040000 28689 3265 26952 53901;53902;53903 43504;43505;43506 43504 3 9606 Homo sapiens 0.0228467637389258 VFHLPTTTFIGGQESALPLR Unmodified 2183.1739 0.17388863 2470 Q02218;Q02218-2;E9PDF2;B4DF00;E9PCR7;Q02218-3;B4DH65;A0A140VJQ5;A2VCT3;A2VCT2;C9J4G7 OGDH 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 4 0 1 61.908 61.913 3 7.4048E-17 19118 20230619_1883_Aki_TMTPro18x_K_F4 167.14 148.77 80051 56489 61275 81464 68101 72246 84263 79330 94450 72646 69423 75948 94680 79429 74466 89035 87634 102900 73814 51946 64037 80054 70656 73901 84289 80419 94610 73927 73553 77086 94885 82362 76886 90046 83826 97530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239880000 28690 2470 26953 53904 43507 43507 1 9606 Homo sapiens 0.12962863703205585 VFIDQINR Unmodified 1003.5451 0.5450795 4244 Q8NBL1;H7C5H0;Q9NRV2;F8WEW4;B4DVA9 POGLUT1 Protein O-glucosyltransferase 1 yes no 0 0 0 7.5 0.5 1 1 50.833 50.911 2 0.0024952 13920 20230619_1888_Aki_TMTPro18x_K_F8 125.81 69.692 116340 94737 94740 100100 110560 133430 112890 112050 118400 120350 123220 130370 136860 105310 128490 135550 131390 134910 107410 86795 98320 101120 113790 131910 113870 116150 120560 121490 126860 131040 138770 111100 131000 135680 125710 128140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218080000 28691 4244 26954 53905;53906 43508 43508 1 9606 Homo sapiens 0.04344876163088429 VFIGNLNTALVK Unmodified 1287.7551 0.75507227 2053 Q5QPL9;A8K4T9;Q53GL6;Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1;B4DSJ1;Q5QPM2 RALY RNA-binding protein Raly yes no 0 0 0 4.5 0.5 1 1 62.114 62.119 3 1.258E-07 18860 20230619_1885_Aki_TMTPro18x_K_F5 137.89 0 52752 49535 55819 59586 55456 68405 66799 62483 70891 52911 51758 48130 54788 46016 58248 55834 58155 54180 48846 45413 56482 59466 57975 68347 66801 63999 71175 53882 54136 49038 55992 48063 59148 55870 55616 51492 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82082000 28692 2053 26955 53907;53908 43509;43510 43510 2 9606 Homo sapiens 0.12270494045401392 VFIMDNCEELIPEYLNFIR Oxidation (M) 2430.16 0.1599544 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 1 0 6.25 0.829 1 1 2 65.901 65.935 2;3 4.1702E-10 20467 20230619_1887_Aki_TMTPro18x_K_F7 136.24 125.3 19798 12980 13433 18922 22577 21687 17727 19233 21500 23055 24274 22235 25205 18337 23505 26355 20665 25900 18235 11941 14340 18640 22595 21667 18273 19915 21819 23068 24801 22492 25586 19484 23794 26319 19836 24585 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 411100000 28693 3177 26956 53909;53910;53911;53912 43511;43512 43512 1845 2 9606 Homo sapiens 0.0020808209765164065 VFIMDNCEELIPEYLNFIR Unmodified 2414.165 0.16503978 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 7 0 1 66.747 66.77 3 1.5739E-19 20819 20230619_1887_Aki_TMTPro18x_K_F7 177.66 170.04 7772.8 5759.8 8447.6 8460.1 4137.8 7518.9 7162.3 7833.1 8631.9 11037 9726.2 8575.9 9171.8 5852.5 10876 10226 9495.2 9033.8 7188.2 5296.7 8463.5 8308.6 4743.6 7672.1 7100.5 8064.6 8763.1 10900 9899.4 8726.5 9444 6367.9 10949 10140 9095.1 8594.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31465000 28694 3177 26956 53913 43513 43513 1 9606 Homo sapiens 0.014523859602377343 VFIMDSCDELIPEYLNFIR Oxidation (M) 2389.1334 0.1334053 751 A0A024RD80;P08238;B4DMA2;B4DGL0 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 1 0 6.5 0.5 1 1 66.105 66.139 3 2.0298E-20 20574 20230619_1887_Aki_TMTPro18x_K_F7 191.51 176.9 24827 22697 21025 21644 23468 21542 26273 22421 18928 23603 30529 26456 26684 21226 25106 32009 29772 35412 22944 20768 21711 21964 24210 21841 26105 22892 20166 23860 30585 26587 27270 22650 25856 32156 28480 33578 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 104810000 28695 751 26957 53914;53915 43514;43515 43515 454 2 9606 Homo sapiens -0.005596067936949112 VFIMDSCDELIPEYLNFIR Unmodified 2373.1385 0.13849068 751 A0A024RD80;P08238;B4DMA2;B4DGL0 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 0 6 0.816 1 1 1 66.973 67.009 3 1.2652E-20 20907 20230619_1887_Aki_TMTPro18x_K_F7 192.96 173.15 17844 9894.1 13933 14931 10076 16268 11549 10209 16718 17531 13920 16990 17173 14060 15638 21355 18137 20661 16436 9114.2 14429 14670 10874 16193 11722 11053 16644 17316 14577 17164 17353 14988 16100 21283 17346 19622 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 101660000 28696 751 26957 53916;53917;53918 43516;43517 43517 2 9606 Homo sapiens 0.006846970688911824 VFIPHGLIMDR Oxidation (M) 1312.6962 0.69617719 1184 Q6LET3;A0A140VJL3;P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes no 0 1 0 2 0 1 52.052 52.091 3 0.005696 15319 20230619_1881_Aki_TMTPro18x_K_F2 69.554 46.675 38516 31508 35900 37698 34938 38696 36221 37616 40234 39683 37883 39734 44813 37956 42615 48193 45583 47549 35594 28899 36678 37582 36412 39034 36588 38560 40689 39999 39303 40287 45416 39756 43568 48212 43599 45162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182910000 28697 1184 26958 53919 43518 43518 728 1 9606 Homo sapiens 0.05233694479420592 VFIPHGLIMDR Unmodified 1296.7013 0.70126256 1184 Q6LET3;A0A140VJL3;P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes no 0 0 0 2.5 0.5 1 1 55.509 55.54 3 1.8679E-09 16789 20230619_1881_Aki_TMTPro18x_K_F2 187.16 137.74 93914 76990 84043 79768 64297 83052 79377 81860 87006 93040 92879 100160 100380 79302 99532 104640 95877 104510 86765 70522 85877 80437 68879 83717 79455 84012 88479 93617 95417 100640 102120 83854 101060 104720 91830 99237 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 346880000 28698 1184 26958 53920;53921 43519;43520 43519 2 9606 Homo sapiens 0.06477998342029423 VFITDDFHDMMPK 2 Oxidation (M) 1626.7058 0.70581517 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;A0A7P0TBC2 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 2 0 5 0 1 52.048 52.122 3 0.0098343 14644 20230619_1885_Aki_TMTPro18x_K_F5 63.727 52.911 140660 109630 125520 148620 156170 169350 163850 147540 179900 163490 193820 188530 174740 149430 184500 205270 182710 212350 129910 100700 129380 147080 160010 169160 165210 152730 182830 165180 197370 189040 179410 158370 187470 205700 175040 201510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37851000 28699 3452 26959 53922 43521;43522 43521 2102;2103 2 9606 Homo sapiens -0.08246950088027916 VFITDDFHDMMPK Oxidation (M) 1610.7109 0.71090055 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;A0A7P0TBC2 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 1 0 4.5 0.5 1 1 56.358 56.393 3 3.2112E-05 16432 20230619_1885_Aki_TMTPro18x_K_F5 113.77 100.89 117400 96429 104070 107740 110580 128110 128010 129380 143210 129670 131100 151570 137180 127930 135330 152200 155850 186370 108450 88386 106960 108190 114900 128040 128520 132080 144540 131710 135510 152040 139840 134020 138890 154410 149130 176540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132030000 28700 3452 26959 53923;53924 43523 43523 2102;2103 1 9606 Homo sapiens -0.07002646225419085 VFITDDFHDMMPK Unmodified 1594.716 0.71598593 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;A0A7P0TBC2 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 6.5 0.5 1 1 61.528 61.575 3 4.8275E-08 18812 20230619_1886_Aki_TMTPro18x_K_F6 136.27 110.12 545840 460550 556720 567910 425400 639360 666330 558690 758750 707490 680880 751190 840440 685180 733750 871640 832580 1000100 504910 422490 563060 565650 460040 638840 660450 580670 764570 708670 709760 758340 847570 719210 754260 879580 796810 947950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 934890000 28701 3452 26959 53925;53926 43524;43525 43524 2 9606 Homo sapiens -0.05758342362810254 VFKEENQK Unmodified 1020.524 0.52400971 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;A0A1W2PQ43;E9PK09;E9PQN2;E9PKI6;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 1 7 0 1 40.888 40.955 3 0.0071814 9622 20230619_1887_Aki_TMTPro18x_K_F7 90.135 61.736 68710 37229 95020 96821 150730 137850 111270 134580 87498 74497 124130 91643 73995 53364 119650 27607 57795 30297 63601 34602 95149 93304 150720 136130 113850 136000 91845 78959 123310 91011 79095 54971 116930 28646 55706 28849 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41370000 28702 4629 26960 53927 43526 43526 1 9606 Homo sapiens 0.0145686606357458 VFLDFFTYAPPK Unmodified 1443.7438 0.74383889 3932 Q15397;B2RDG4 KIAA0020 Pumilio domain-containing protein KIAA0020 yes no 0 0 0 4 0 1 65.717 65.729 3 0.0061315 20702 20230619_1883_Aki_TMTPro18x_K_F4 69.979 47.062 14719 8645 13232 12772 10085 12238 11320 14119 13136 16143 13858 14055 16945 13320 11718 19808 13628 17435 13575 7959 13513 12554 10773 12452 11416 14338 13330 16133 14314 14346 16941 14112 12160 19642 13047 16571 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18691000 28703 3932 26961 53928 43527 43527 1 9606 Homo sapiens 0.03971671951285316 VFLDPNILSDDGTVALR Unmodified 1843.968 0.96797818 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 6 0 1 64.148 64.194 3 1.7707E-10 20005 20230619_1886_Aki_TMTPro18x_K_F6 144.73 120.89 15287 16860 15541 20113 13794 16579 18134 19170 18502 19594 20940 22671 23513 16659 20353 24451 24851 27826 14168 15448 15770 19998 14588 17093 18052 19423 18930 19861 21494 22676 23746 17814 21023 24618 23755 26382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 399220000 28704 3598 26962 53929 43528 43528 1 9606 Homo sapiens 0.0797529052392747 VFLENVIR Unmodified 988.57057 0.57056597 2211 B2R4R0;P62805;Q0VAS5;Q6B823 HIST1H4H;HIST1H4A Histone H4 yes no 0 0 0 2.88 2.22 6 5 1 1 1 1 1 1 64.676 64.696 2 0.00056536 18024 20230619_1881_Aki_TMTPro18x_K_F2 161.12 120.92 4514200 4255800 3733300 4240000 3469400 4614900 4249100 4562800 4259000 5025900 4716900 4778700 4265400 6007500 2945800 6905500 2932500 6083600 4172200 3895100 3857400 4290500 3652900 4637300 4241400 4676100 4360100 5047300 4796800 4908200 4320400 6192000 3022300 6867200 2819100 5775300 14 14 14 14 14 14 14 14 14 14 14 14 14 14 13 14 13 14 219280000000 28705 2211 26963 53930;53931;53932;53933;53934;53935;53936;53937;53938;53939;53940;53941;53942;53943;53944;53945;53946 43529;43530;43531;43532;43533;43534;43535;43536;43537;43538;43539;43540 43536 12 9606 Homo sapiens 0.07582350685527217 VFLISASSK Unmodified 950.54368 0.54368251 2698 Q9H6Z4;Q9H6Z4-2;Q9H6Z4-3;Q53GE1;B7Z7F3;Q308M8;B7Z5P4;K7EIJ4 RANBP3 Ran-binding protein 3 yes no 0 0 0 4.5 0.5 1 1 56.791 56.825 3 0.0030133 17022 20230619_1883_Aki_TMTPro18x_K_F4 83.948 63.078 58334 42431 53336 53420 59393 70669 61085 58118 85724 37426 40749 37293 42586 34720 47568 39432 42293 41453 53864 38955 54694 53266 61356 69840 62211 59694 83983 39044 43995 37815 43648 36161 47945 39692 40510 39354 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 21223000 28706 2698 26964 53947;53948 43541;43542 43541 2 9606 Homo sapiens 0.06643242074335376 VFLLPDK Unmodified 830.49019 0.49019038 670 A0A994J7L5;J3KQA0;A0A024RBE9;P21579;A0A994J5A7;A4FU00;A0A994J4M1;Q8N9I0;A0A994J4V4 SYT1;SYT2 Synaptotagmin-1;Synaptotagmin-2 yes no 0 0 0 1.5 0.5 1 1 60.197 60.203 2 0.067113 18595 20230619_1880_Aki_TMTPro18x_K_F1 81.958 40.656 50623 37717 45939 63406 52079 65333 63220 61411 69302 57752 57073 62317 58874 49957 58219 70140 80707 79122 46748 34743 47274 61878 53978 65767 63260 62933 69740 58716 59260 62648 60038 53022 60517 70615 76992 75061 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66365000 28707 670 26965 53949;53950 43543 43543 1 9606 Homo sapiens 0.06816489362472566 VFLQDHCLAEGYGTK Unmodified 1736.8192 0.81920545 1781 Q6NUN2;A3F769;A3F768;A0A8I5KX72;O15226;O15226-2;A2I829 NKRF;NRF NF-kappa-B-repressing factor yes no 0 0 0 7 0 1 51.994 52.068 3 1.4773E-07 14535 20230619_1887_Aki_TMTPro18x_K_F7 123.02 99.603 209660 163970 207520 225020 185830 202270 208240 206610 216270 275750 239420 249880 270950 217980 252450 304450 261870 283030 193790 150630 210740 221900 195300 206360 209030 212660 221170 274050 246050 253740 274560 230540 257860 303190 250620 268970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168450000 28708 1781 26966 53951 43544;43545 43545 2 9606 Homo sapiens -0.01973138650623696 VFLQGPAPVGTPSFNR Unmodified 1685.8889 0.88893999 4207 Q8IWZ3-6;Q8IWZ3-4;Q8IWZ3;H0Y4P6;H0Y472;H0Y785;Q9H059;H7C0V5 ANKHD1;DKFZp586G1024;ANKHD1-EIF4EBP3 Ankyrin repeat and KH domain-containing protein 1 yes no 0 0 0 5 0 1 59.125 59.179 3 0.00011972 17557 20230619_1885_Aki_TMTPro18x_K_F5 92.952 80.185 41079 32168 43604 35658 34605 41566 44820 40318 49989 38283 37540 33560 39269 31807 41255 41486 35396 38840 37993 29488 43907 35835 36951 41555 44756 41227 50100 38683 39164 34253 40105 33389 41596 41386 33947 36905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37216000 28709 4207 26967 53952 43546 43546 1 9606 Homo sapiens 0.07343108080317506 VFLQYLPAIR Unmodified 1218.7125 0.71247918 526 A0A024R8M0;Q14344;Q14344-2;B4DWV9 GNA13 Guanine nucleotide-binding protein subunit alpha-13 yes no 0 0 0 7 0 1 63.721 63.753 2 0.00047275 19551 20230619_1887_Aki_TMTPro18x_K_F7 145.34 99.974 113040 98582 119800 114310 100340 112860 123140 118460 132290 107160 108580 89289 107210 87668 123940 102450 97175 98968 104620 90371 120820 114190 106360 114380 123140 120350 133220 108410 112390 91483 110210 91303 124140 102600 93248 94030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172540000 28710 526 26968 53953 43547 43547 1 9606 Homo sapiens 0.11187143707820724 VFLSGMPELR Unmodified 1147.606 0.6059652 460 Q9BXS5-2;A0A024R7K8;Q9BXS5;B3KNH5;E7ENJ6;Q59EK3;B4DDG7;K7EJL1;Q53GI5;B3KN68;K7EJJ1;K7EPR4;Q9Y6Q5;Q9Y6Q5-2;K7EMG5 AP1M1;AP1M2 AP-1 complex subunit mu-1;AP-1 complex subunit mu-2 yes no 0 0 0 2 0 1 61.361 61.371 2 0.00093985 19215 20230619_1881_Aki_TMTPro18x_K_F2 114.89 87.764 121190 105900 124320 129030 99015 137040 121950 133730 139750 146020 129150 132430 161020 126740 142110 168240 153470 158000 112140 97129 125710 128530 105690 137830 122260 137140 141040 146490 134440 134900 162370 133170 145610 167740 146760 150160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214460000 28711 460 26969 53954 43548 43548 1 9606 Homo sapiens 0.03806645151007615 VFMHDNSPGR Oxidation (M) 1174.5189 0.5189411 1858 A0A8V8TRG9;P42345;A0A8V8TQM6;A0A8V8TQ52;B4E2H2;B4DZD5 MTOR Serine/threonine-protein kinase mTOR yes no 0 1 0 5 0 1 31.973 32.053 3 0.001255 6437 20230619_1885_Aki_TMTPro18x_K_F5 88.496 79.537 15229 10482 15827 13552 13216 17613 15642 12774 17018 16227 17642 17928 16813 15773 15745 16470 17861 21009 14073 9628.5 15978 13488 14021 17383 15675 13485 17280 16275 18038 18044 17146 16379 16151 16792 17091 19895 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7281500 28712 1858 26970 53955 43549 43549 1184 1 9606 Homo sapiens -0.06133761070714172 VFMQEFK Unmodified 927.45242 0.45242467 3234 Q53R19;O15144;A0A024R408;Q9BXV5 ARPC2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 4.5 3.5 1 1 57.897 57.92 3 0.0045035 16965 20230619_1888_Aki_TMTPro18x_K_F8 110.61 73.591 51291 44838 51424 52899 51275 73486 59217 58269 70389 45854 39373 31737 38511 30167 50124 45898 37644 33266 47448 41110 52259 53025 53630 72350 59572 60233 69775 46640 41798 32856 39870 32008 50053 45180 36108 31746 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37374000 28713 3234 26971 53956;53957 43550;43551 43551 2 9606 Homo sapiens -0.014203448946432218 VFNCISYSPLCK Unmodified 1486.6949 0.69485656 4009 Q9GZL7;Q53T99;B4DRY7 WDR12 Ribosome biogenesis protein WDR12 yes no 0 0 0 5 0 1 60.757 60.807 3 0.0023769 18258 20230619_1885_Aki_TMTPro18x_K_F5 73.435 58.989 36888 37054 43644 53597 44865 53152 42934 47365 60485 38421 35952 31039 35353 27804 46123 41427 36144 34276 34210 34031 43851 52724 46496 53622 43950 48554 59591 39133 38004 31775 36601 29515 46135 41027 34666 32638 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75070000 28714 4009 26972 53958 43552 43552 1 9606 Homo sapiens -0.02902307671638482 VFNDTCR Unmodified 910.3967 0.3967007 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 4 0.816 1 1 1 38.425 38.487 2 0.0074301 8910 20230619_1885_Aki_TMTPro18x_K_F5 125.25 98.29 158380 107140 155540 192430 213480 218270 236090 225630 255270 200020 207490 218620 212440 186480 200160 204800 260060 241840 146270 98826 159370 187480 217600 218810 237180 229330 256910 204160 215460 219980 216210 194420 207070 207580 248120 229380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 508580000 28715 1723 26973 53959;53960;53961 43553 43553 1 9606 Homo sapiens -0.062081780822722976 VFNIDLK Unmodified 847.48035 0.48035398 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8 IFI16 Gamma-interferon-inducible protein 16 yes no 0 0 0 2.8 2.64 2 2 1 59.818 59.831 2;3 0.026773 18381 20230619_1880_Aki_TMTPro18x_K_F1 100.15 31.449 211530 169930 198600 242560 476490 565730 486220 494550 533980 454570 405720 416720 542630 394770 412720 564880 437370 489680 195480 156170 207540 243000 473490 545540 490590 508490 536320 460600 428320 424320 542900 417180 424190 560230 418600 465710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1152200000 28716 2829 26974 53962;53963;53964;53965;53966 43554;43555;43556 43554 3 9606 Homo sapiens 0.05051301357104876 VFNLYPR Unmodified 907.49159 0.49158736 1284 A0A1C7CYX9;Q59GB4;Q16555;Q53ET2;Q16555-2;Q8NAN9 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 0 0 0 4.5 0.5 1 1 54.125 54.141 2 0.0061163 15467 20230619_1885_Aki_TMTPro18x_K_F5 117.7 82.599 323220 320500 295330 273310 387840 623410 404340 405660 749630 102790 88638 101930 113190 89730 156630 107860 114690 104430 299050 292950 303890 284600 398310 598390 416650 421090 715600 121680 123220 103340 117080 93949 155910 108070 110070 99266 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 378380000 28717 1284 26975 53967;53968 43557;43558 43558 2 9606 Homo sapiens 0.03414123451238993 VFNTGGAPR Unmodified 917.47191 0.47191456 2980 F8VPD4;P27708;Q53SY7;G1UI39 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 1.5 0.5 1 1 39.957 39.992 2 0.00073765 9809 20230619_1881_Aki_TMTPro18x_K_F2 125.16 85.514 345800 273680 311530 326770 418040 414770 388610 369320 495030 409430 446230 437000 478980 387350 404570 460400 521150 455020 319430 251040 320960 326800 424880 411860 396680 381500 496180 412730 461410 440810 484280 405140 419400 461050 497050 432480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 326200000 28718 2980 26976 53969;53970 43559;43560 43560 2 9606 Homo sapiens 0.0098774744047887 VFNTPEGVPSAPSSLK Unmodified 1628.841 0.84098675 1294 B7Z670;A0A1S5UZH4;Q14CA1;C9JYY6;Q92823-3;Q92823-4;Q92823-6;Q92823-2;Q92823;Q92823-5 NRCAM Neuronal cell adhesion molecule yes no 0 0 0 1 0 1 56.627 56.627 3 0.050627 17110 20230619_1880_Aki_TMTPro18x_K_F1 43.37 35.459 52428 52360 57699 54746 58186 73081 85246 76862 87115 95264 83678 80124 92114 63576 82570 80037 62010 62757 48586 47933 58203 55377 61153 72590 84395 78725 88562 94799 86369 81429 93151 67051 82984 79224 59535 59788 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41014000 28719 1294 26977 53971 43561 43561 1 9606 Homo sapiens 0.051719893696144936 VFNYNTLER Unmodified 1154.572 0.57202253 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258;B4E2C9;A0A7I2V3G0;A0A7I2YQF9;D6R997;D6RBZ7;D6RCL6;D6RBG7;D6RBT6 COPB2 Coatomer subunit beta' yes no 0 0 0 7.5 0.5 1 1 50.808 50.885 2 0.00014124 13887 20230619_1888_Aki_TMTPro18x_K_F8 155.58 114.81 283900 253870 283250 318600 283530 323240 327800 322470 345210 337400 333020 283210 326340 250550 308220 362750 335500 302980 262660 232880 288040 316480 295710 326470 328510 329910 350240 338520 341650 289140 332260 265550 315540 359220 320520 288520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 697870000 28720 3031 26978 53972;53973 43562 43562 1 9606 Homo sapiens 0.0009193998362206912 VFPHAEFR Unmodified 1001.5083 0.50830006 573 A0A024R9G7;Q6PL18;A0A0B4J211 ATAD2 ATPase family AAA domain-containing protein 2 yes no 0 0 0 7.5 0.5 1 1 42.881 42.922 3 0.016226 10453 20230619_1887_Aki_TMTPro18x_K_F7 60.074 43.236 57800 45664 49121 51608 60538 62189 58944 62514 78540 71132 70051 62590 75756 57022 58308 63916 70916 56696 53368 41866 50801 51787 61954 62114 60126 64039 78570 71185 72444 63744 76265 59401 60318 63712 67632 53979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22077000 28721 573 26979 53974;53975 43563 43563 1 9606 Homo sapiens 0.007606243371810706 VFPMPLPR Unmodified 955.53134 0.53134369 2052 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;C9JZP1 NCAPH Condensin complex subunit 2 yes no 0 0 0 5 0 1 58.389 58.445 2 0.007425 17298 20230619_1885_Aki_TMTPro18x_K_F5 107.65 77.469 84476 78021 83501 87372 67136 89205 89817 88472 96045 75641 69287 53152 64535 48680 79103 79631 69630 55828 78168 71485 84705 87524 71751 90029 89444 90098 96361 76479 72074 54929 66673 52012 79659 78194 66617 53328 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24246000 28722 2052 26980 53976 43564 43564 1 9606 Homo sapiens 0.05179927130302531 VFPPEIVEQMGCK Unmodified 1532.7367 0.73672137 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;A0A994J5C5;A0A994J855;A0A994J5Y2;A0A994J7T3 NSF Vesicle-fusing ATPase yes no 0 0 0 7.5 0.5 1 1 62.349 62.38 3 0.042661 18772 20230619_1888_Aki_TMTPro18x_K_F8 46.358 24.894 118780 91708 93763 114500 84158 102780 102790 115020 114050 134700 132280 139470 133030 124240 131520 158550 133340 150680 109600 84169 97315 113610 88826 105090 102980 117170 116370 135160 134960 140860 135740 130410 134030 158260 127680 143140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127920000 28723 1435 26981 53977;53978 43565 43565 1 9606 Homo sapiens -0.008337519831229656 VFQASPEDHEK Unmodified 1285.5939 0.59388018 2721 B8ZZV5;Q8TCC3-3;Q8TCC3;Q8TCC3-2 MRPL30 39S ribosomal protein L30, mitochondrial yes no 0 0 0 3.5 0.5 1 1 40.386 40.435 3 0.00025387 9835 20230619_1882_Aki_TMTPro18x_K_F3 100.38 76.033 47186 40263 52517 58931 64163 68166 57802 62310 66781 63752 74124 78571 65435 57306 61300 63992 72223 65400 43684 37004 53114 58069 65527 68081 58954 64095 67808 64793 75349 78342 66877 60146 63022 64282 68949 62128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75897000 28724 2721 26982 53979;53980 43566 43566 1 9606 Homo sapiens -0.03749300058461813 VFQEFLK Unmodified 909.496 0.49600404 4775 yes no 0 0 0 8 0 1 60.666 60.698 3 0.007359 18062 20230619_1888_Aki_TMTPro18x_K_F8 91.906 0 + 48432 38548 45841 47945 45805 60202 51639 46266 50305 57973 59254 55359 61527 52494 64365 59466 65115 59872 44757 35373 46808 47796 47807 59603 51693 48554 51720 57886 60469 56228 62853 54618 65411 59691 62258 56882 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36479000 28725 4775 26983 53981 43567 43567 1 9606 Homo sapiens 0.03763587874141194 VFQFLNAK Unmodified 965.53345 0.53345218 1864 C9JXB8;A0A994J4A5;C9JNW5;V9HW01;P83731 RPL24;HEL-S-310 60S ribosomal protein L24 yes no 0 0 0 4.5 0.5 1 1 61.982 62.009 3 0.00047269 18804 20230619_1885_Aki_TMTPro18x_K_F5 138.9 67.394 614420 527180 549950 549440 529300 979810 268250 585700 323770 303410 261050 165610 231530 196010 346000 310160 286280 145970 567810 482840 563800 558560 548060 948070 288830 616870 324700 317770 269090 176140 242680 207090 346290 300830 273510 140900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1160000000 28726 1864 26984 53982;53983 43568 43568 1 9606 Homo sapiens 0.04930679139761196 VFQGTDEQLNDLYHNHQR Unmodified 2213.025 0.024992557 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7;Q32P42;A8K3I2;E7EN38;A0A494C122;E7ESD9;A0A494BZX5;A0A494C0Y7 RAD50 DNA repair protein RAD50 yes no 0 0 0 5 0.816 1 1 1 47.548 47.614 4 4.4127E-39 12731 20230619_1885_Aki_TMTPro18x_K_F5 264.03 241.55 44458 34428 42047 43520 38924 49408 48049 45865 50567 45645 46980 45613 54172 42724 50549 53645 60360 55567 41077 31601 42886 43280 40973 49414 47996 47101 51222 46155 48685 46234 54879 44767 52020 53830 57624 52775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 248940000 28727 4309 26985 53984;53985;53986 43569 43569 1 9606 Homo sapiens -0.0329989393762844 VFQNEVLGTLQR Unmodified 1402.7569 0.75686319 1528 Q13144;A0A3B3IUB1;A0A3B3ITG6;Q59HD8 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes no 0 0 0 1.5 0.5 1 1 58.186 58.201 2;3 9.6227E-10 17897 20230619_1881_Aki_TMTPro18x_K_F2 139.76 112.65 12681 10321 10481 12563 11638 12695 13281 13213 15267 12468 13368 13648 16921 11654 16014 14778 15364 16076 11709 9468.4 10860 12505 12047 12840 13354 13445 15359 12680 13966 13738 17095 12267 16257 14876 14712 15252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5234500 28728 1528 26986 53987;53988 43570;43571 43571 2 9606 Homo sapiens 0.07159503063394368 VFQSSTSQEQVYNDCAK Unmodified 1989.8738 0.87381979 2727 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;M1VKJ2;M1VRN1;A8K048;M1VPF9;M1V490;M1VKI9;M1V481;M1VE89;M1VRN0;M1VPF7;Q6P164;Q66K46;Q2TA90 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;KIF5B-RET(NM_020975)_K23;R12;KIF5B-RET(NM_020630)_K23;R12;KIF5B-RET(NM_020975)_K22;R12;KIF5B-RET(NM_020630)_K22;R12;KIF5B-RET(NM_020630)_K16;R12;KIF5B-ALK_K17;A20;KIF5B-RET(NM_020975)_K16;R12;KIF5B-RET(NM_020975)_K15;R12;KIF5B-RET(NM_020630)_K15;R12 Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 4.5 0.5 1 1 48.871 48.928 3 2.0141E-13 13483 20230619_1883_Aki_TMTPro18x_K_F4 151.48 139.57 109590 86522 100370 101270 82931 91781 95264 95998 101530 115920 119760 109650 136090 99007 101620 141700 127200 123190 101240 79352 102450 100980 87874 93656 95605 98332 103890 115860 122620 111330 136630 104800 105580 140550 121430 117220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 395940000 28729 2727 26987 53989;53990 43572;43573 43572 2 9606 Homo sapiens -0.08152216360485909 VFQVEYAMK Unmodified 1113.5529 0.55286699 1225 Q6IB71;A0A140VK43;P25788-2;P25788;G3V3W4;G3V5N4 PSMA3 Proteasome subunit alpha type;Proteasome subunit alpha type-3 yes no 0 0 0 8 0 1 58.545 58.591 3 0.021212 17216 20230619_1888_Aki_TMTPro18x_K_F8 65.347 47.035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28730 1225 26988 53991 43574 43574 1 9606 Homo sapiens 0.0006326736834125768 VFSDEVQQQAQLSTIR Unmodified 1847.9377 0.93774068 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;B0QY90;B3KNG0;Q7Z5X3;Q8N7H0 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 0 5.5 0.5 1 1 55.063 55.134 3 1.5322E-42 16062 20230619_1886_Aki_TMTPro18x_K_F6 271.46 231.73 145890 125300 134910 144030 129150 146880 153040 147160 153810 193850 182420 184070 212470 165660 177380 220660 205050 217530 134860 114860 137940 143990 135270 148350 152990 151580 158020 193030 187140 186700 214130 174480 182760 220540 196010 206600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1175900000 28731 2176 26989 53992;53993 43575;43576 43576 2 9606 Homo sapiens 0.047689318587572416 VFSDIIYTVASCTENEASR Unmodified 2160.9997 0.99974859 4259 Q8NI27;A0A0C4DG98;H0Y815;Q6P441 THOC2 THO complex subunit 2 yes no 0 0 0 6.5 0.5 1 1 65.515 65.549 3 1.7535E-14 20333 20230619_1887_Aki_TMTPro18x_K_F7 149.52 134.59 24990 20826 26677 26849 22594 26677 25297 29588 28724 28383 27389 29230 31443 28356 28596 38853 31555 36374 23123 19115 26898 26624 23876 27048 25480 29983 29026 28771 28356 29626 31843 29824 29351 38703 30196 34556 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 128070000 28732 4259 26990 53994;53995 43577;43578 43578 2 9606 Homo sapiens -0.0343112957507401 VFSGLVSTGLK Unmodified 1106.6336 0.63356015 3447 P13639;Q8TA90;Q6PK56;B4DRE8 EEF2 Elongation factor 2 yes no 0 0 0 5 0 1 61.347 61.398 3 4.4688E-05 18476 20230619_1885_Aki_TMTPro18x_K_F5 132.88 98.797 544810 462040 494010 527590 431120 515160 512600 505100 543120 483820 425820 365520 475710 364430 499510 495770 464920 391310 503490 423530 505340 527410 455380 521670 513160 516220 546940 486630 444390 376750 484800 383060 505560 490310 444650 373040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2803000000 28733 3447 26991 53996 43579 43579 1 9606 Homo sapiens 0.08450871682885008 VFSIISSEK Unmodified 1008.5492 0.54916182 2529 B4DLM8;O15381-5;O15381;Q96PA2;B4DF43;E9PGD8;E7EWK7;A0JLP9;E9PH71 NVL Nuclear valosin-containing protein-like yes no 0 0 0 2 0 1 60.153 60.165 3 0.013771 18682 20230619_1881_Aki_TMTPro18x_K_F2 63.216 29.838 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28734 2529 26992 53997 43580 43580 1 9606 Homo sapiens 0.0452292086615671 VFSLSSEFK Unmodified 1042.5335 0.53351176 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 1.5 0.5 1 1 60.982 60.987 2;3 8.9005E-06 18866 20230619_1880_Aki_TMTPro18x_K_F1 175.91 134.25 210710 185160 221900 244510 224460 279120 256280 237980 296450 197540 197120 159340 178140 165890 223430 198910 221310 188780 195010 169950 224720 242420 234040 278550 257700 244960 295450 200910 205950 163930 184730 172620 226140 198880 211540 179530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 232180000 28735 3312 26993 53998;53999 43581;43582 43581 2 9606 Homo sapiens 0.013946343490943036 VFSWGFGGYGR Unmodified 1231.5774 0.57744226 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 6.5 0.5 1 1 62.512 62.556 2 2.4961E-39 18959 20230619_1887_Aki_TMTPro18x_K_F7 297.11 286.4 676190 653700 883130 785350 716600 944370 852320 869190 910220 962530 836480 839580 919930 718170 993290 774690 825790 820350 627540 599250 877010 784700 761730 940810 853770 895400 921760 963880 865780 853200 939050 748350 998270 780950 791700 778710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1828499999.9999998 28736 617 26994 54000;54001 43583;43584 43584 2 9606 Homo sapiens -0.029083364339157924 VFTAIANQPWAQK Unmodified 1472.7776 0.77759863 2051 A8K4T6;Q16401-2;Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes no 0 0 0 5 0 1 61.957 62.005 3 8.2817E-05 18812 20230619_1885_Aki_TMTPro18x_K_F5 105.03 88.834 158910 136430 128130 175570 163170 219970 145950 195920 248900 168280 188220 211310 197740 192670 187920 244310 252250 276750 146750 125200 133560 174560 166870 218360 151380 200940 245070 173050 196510 212040 201340 202010 195140 246300 240890 262420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 207370000 28737 2051 26995 54002 43585 43585 1 9606 Homo sapiens 0.060120934430187845 VFTASCDK Unmodified 926.41677 0.41676744 3757 P78406;Q5J8M4;E9PQ57;E9PPG9;B0QZ36 RAE1 mRNA export factor yes no 0 0 0 7 0 1 45.18 45.266 2 0.068819 11415 20230619_1887_Aki_TMTPro18x_K_F7 62.969 29.848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28738 3757 26996 54003 43586 43586 1 9606 Homo sapiens -0.04938427142303681 VFTGVVTK Unmodified 849.496 0.49600404 4208 Q8IX12-2;Q8IX12;A0A0C4DGG8;F5H2E6;F5H3E1;F5H7M9 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 0 0 0 2.5 0.5 1 1 52.232 52.284 2 0.0022464 15165 20230619_1882_Aki_TMTPro18x_K_F3 129.77 85.08 151150 143440 159610 171430 205020 235980 196030 185420 234500 162090 177090 186180 178800 141150 163160 176970 180090 176140 139970 131500 162210 171630 209220 232540 199280 192320 234230 165960 184530 186390 181650 149000 167200 177190 172120 167320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136450000 28739 4208 26997 54004;54005 43587 43587 1 9606 Homo sapiens 0.06523587874141867 VFTSWTGGGAAASR Unmodified 1366.663 0.6629628 2782 CON__P15636 yes yes 0 0 0 5 1.41 1 1 1 1 1 52.788 52.848 2 2.1399E-28 15225 20230619_1883_Aki_TMTPro18x_K_F4 289.22 252.78 + 1815100 1351200 1695700 1504100 2600100 2397700 2126700 3607500 1670200 1053500 1311600 1129400 908980 900200 1795700 1185600 1265700 958470 1676500 1238900 1744400 1520700 2611600 2384600 2161300 3526800 1711500 1201200 1346000 1138700 983260 950130 1777700 1176200 1214000 913890 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 13080000000 28740 2782 26998 54006;54007;54008;54009;54010 43588;43589;43590;43591;43592;43593 43589 6 -0.005702160388864286 VFTTQELVQAFTHAPATLEADR Unmodified 2444.2336 0.23358835 3356 O95433;O95433-2;G3V438;H0YJG7;H0YJ63 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 1 0 1 63.852 63.852 3 1.1518E-05 20080 20230619_1880_Aki_TMTPro18x_K_F1 93.006 77.765 5700.4 6115.8 6165.9 6239.3 5120 9197.6 7695.8 6449.8 8179.4 7386.2 9486.5 8759.3 8874.3 7940.4 8910.7 10394 8544.9 9532.4 5284.8 5596.3 6215.7 6330.4 5495.8 9006.2 7623.1 6806.9 8348.4 7461.7 9641.2 8811.5 9079.5 8343 9049.3 10353 8186.1 9059.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19344000 28741 3356 26999 54011 43594 43594 1 9606 Homo sapiens 0.06924089855965576 VFTTVGSAEK Unmodified 1037.5393 0.53932542 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 7 0.816 1 1 1 49.333 49.411 2 1.7135E-13 13276 20230619_1887_Aki_TMTPro18x_K_F7 223.32 174.76 406030 301540 337110 341210 279130 298480 342730 311680 391780 488670 503610 473330 547800 450930 355760 660410 595310 493880 374700 276530 347290 340940 296380 305570 343540 322380 401200 483800 512870 480870 548670 476770 380020 650050 566570 471220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 593750000 28742 3606 27000 54012;54013;54014 43595;43596 43595 2 9606 Homo sapiens 0.022057328607616 VFTTVGSAEKR Unmodified 1193.6404 0.64043645 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 1 2.5 0.5 1 1 43.155 43.228 3 8.1795E-07 11313 20230619_1881_Aki_TMTPro18x_K_F2 164.39 127.71 198240 205590 209320 169580 214650 170030 195300 191410 170140 210120 245660 146680 147520 111450 221320 109540 145840 95479 183700 187850 211430 174580 221360 172810 197450 194530 177840 209250 243650 150740 156930 116130 218960 109730 139920 91020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180340000 28743 3606 27001 54015;54016 43597 43597 1 9606 Homo sapiens 0.05136184563457391 VFVDLLPATQCTK Unmodified 1490.7803 0.78030075 2127 A8K8X0;Q14CX7-2;Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes no 0 0 0 2 0 1 62.7 62.709 3 0.0078525 19850 20230619_1881_Aki_TMTPro18x_K_F2 68.108 48.001 52621 34074 52221 51126 37208 48608 53006 43077 50488 74269 65164 52629 64347 50485 50210 81715 71879 62024 48591 31361 52859 50184 40302 49190 52466 45250 52264 72698 66031 54391 65016 53810 52675 80411 68495 59156 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100000000 28744 2127 27002 54017 43598 43598 1 9606 Homo sapiens 0.05454180785682183 VFVESVLR Unmodified 947.54402 0.54401687 575 A0A024R9I0;P21283;E7EV59;A8KA87;A0A0U1RR16;Q8NEY4-2;Q8NEY4 ATP6V1C1;ATP6V1C2 V-type proton ATPase subunit C 1;V-type proton ATPase subunit C 2 yes no 0 0 0 1 0 1 56.596 56.596 2 0.0018478 16961 20230619_1880_Aki_TMTPro18x_K_F1 136.11 71.337 95948 67051 81119 108130 73372 80709 86429 87014 101770 116300 96148 113250 119560 99459 96214 129760 120420 135960 88526 61746 83675 105380 77229 83805 86882 89297 102720 115840 100040 114570 120190 104680 99774 130140 115090 129020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68376000 28745 575 27003 54018 43599 43599 1 9606 Homo sapiens 0.06814661794203403 VFVEYIQPK Unmodified 1121.6121 0.61209643 2509 B4DK32;Q14139;Q14139-2;Q05BZ7 UBE4A Ubiquitin conjugation factor E4 A yes no 0 0 0 1.5 0.5 1 1 59.369 59.375 3 0.0019029 18216 20230619_1880_Aki_TMTPro18x_K_F1 81.594 49.586 33519 27666 31358 31129 29724 34803 35920 31509 41185 38337 35544 35233 38260 35423 39493 40710 37990 40152 30979 25360 32013 31211 31194 34844 36010 32611 41437 38303 36862 35916 39041 36804 40062 40794 36378 38134 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71862000 28746 2509 27004 54019;54020 43600 43600 1 9606 Homo sapiens 0.05615486654187407 VFVGGLSPDTSEEQIK Unmodified 1704.857 0.85703074 756;3227 A0A087WUK2;A0A024RDB5;O14979;B4DTA2;O14979-2;O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 4.5 0.5 1 1 58.721 58.75 2 2.0127E-33 17808 20230619_1883_Aki_TMTPro18x_K_F4 256.52 221.3 30908 21568 26287 27825 23397 31974 25840 29605 35555 31663 33264 33073 38277 31053 32268 43764 35805 37277 28518 19810 27057 27638 24677 31943 26229 30452 35574 31945 34448 33472 38615 32766 33178 43376 34234 35469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69822000 28747 756;3227 27005 54021;54022 43601 43601 1 9606 Homo sapiens 0.032796508158526194 VFVGYNSTGAELR Unmodified 1411.7096 0.70957864 670 A0A994J7L5;J3KQA0;A0A024RBE9;P21579;A0A994J776 SYT1 Synaptotagmin-1 yes no 0 0 0 8 0 1 52.351 52.428 2 4.3462E-27 14581 20230619_1888_Aki_TMTPro18x_K_F8 276.58 255.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28748 670 27006 54023 43602 43602 1 9606 Homo sapiens 0.02019223792399316 VFVSPLAK Unmodified 859.51674 0.51673948 239 P10515;A0A024R3D8;Q86YI5;A0A7P0TBE2;A0A7P0TAX2;A0A7P0TAG1;B4DJX1;A0A7P0TBK2;A0A7P0T997;A0A7P0Z4G4;H0YDD4;E9PEJ4;A0A7P0TA47;B4DS43;Q01991 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial;Acetyltransferase component of pyruvate dehydrogenase complex yes no 0 0 0 3.5 0.5 1 1 56.377 56.4 2 0.0029193 16792 20230619_1883_Aki_TMTPro18x_K_F4 120.92 37.634 488140 452360 476670 535220 522060 607490 579120 571820 660030 507800 492080 474420 553930 430130 496970 628570 572450 528860 451660 414670 486300 534660 540520 607940 582960 584940 660820 515930 515410 482100 560580 455720 511230 622480 546690 503530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 413050000 28749 239 27007 54024;54025 43603;43604 43604 2 9606 Homo sapiens 0.08136178253812432 VFVVGESYTVVQRPSLK Unmodified 1907.0516 0.051648225 397 G3V3C0;G3V4M9;B4DE87;A0A024R6H3;Q8N3Y0;Q13572-2;Q13572 ITPK1 Inositol-tetrakisphosphate 1-kinase yes no 0 0 1 4 0 1 56.922 56.928 3 6.1539E-09 17075 20230619_1883_Aki_TMTPro18x_K_F4 121.72 104.02 49758 42656 58181 57553 39654 47103 51071 52189 51873 69738 66986 61754 73561 63910 67670 77065 66285 82176 46088 39166 58118 56770 42955 48533 50915 53445 53483 69264 68276 63153 74583 66567 68897 77487 63545 77938 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81268000 28750 397 27008 54026 43605 43605 1 9606 Homo sapiens 0.13440446691629404 VFYTGQVVK Unmodified 1039.5702 0.57023162 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 0 3 0 1 53.195 53.254 2 0.00014774 15598 20230619_1882_Aki_TMTPro18x_K_F3 135.79 75.64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28751 1532 27009 54027 43606 43606 1 9606 Homo sapiens 0.05202930965674568 VGAAEIISR Unmodified 914.51853 0.5185304 3309 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 0 6 0.816 1 1 1 44.555 44.639 2 0.00046105 11491 20230619_1886_Aki_TMTPro18x_K_F6 135 28.088 284030 230750 251790 295030 301050 329940 322070 296430 365180 332650 353840 343830 400870 308290 314630 399860 389990 389400 262370 211790 259490 293030 309450 330220 324740 306210 369120 334700 365480 347510 403380 324160 326080 399500 372410 369960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 666510000 28752 3309 27010 54028;54029;54030 43607 43607 1 9606 Homo sapiens 0.05785187271771974 VGAEDADGIDMAYR Oxidation (M) 1497.6406 0.64057238 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 1 0 1.5 0.5 2 2 45.597 45.638 2;3 0.00013617 12425 20230619_1881_Aki_TMTPro18x_K_F2 99.568 90.987 103570 73853 94768 104130 95842 104350 100230 111720 120390 133610 172830 191320 159760 141560 136900 152840 175270 185370 95625 67893 97064 102660 99623 105650 101520 114210 123580 135540 174370 189840 162420 148230 141820 155190 167400 175680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 191670000 28753 1637 27011 54031;54032;54033;54034 43608;43609 43609 1069 2 9606 Homo sapiens -0.08834228289515522 VGAEDADGIDMAYR Unmodified 1481.6457 0.64565776 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 1.5 0.5 1 1 49.994 50.023 2 1.5668999999999998E-36 14459 20230619_1881_Aki_TMTPro18x_K_F2 336.31 330.59 182890 159320 169000 176690 126910 163270 173080 158820 179970 236820 223040 295110 261460 218450 251260 280110 277450 325400 169070 145990 172270 176900 136590 166040 172120 164760 184950 236780 229040 294050 265130 231170 257300 282920 265540 308410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174780000 28754 1637 27011 54035;54036 43610;43611 43611 2 9606 Homo sapiens -0.07589924426883954 VGAEELTADQNLK Unmodified 1386.6991 0.69907354 3663 Q6PJJ2;P56182;Q53FR7;Q96J73;B4DZM3 RRP1 Ribosomal RNA processing protein 1 homolog A yes no 0 0 0 3.5 0.5 1 1 50.719 50.79 3 3.7374E-08 14330 20230619_1883_Aki_TMTPro18x_K_F4 145.09 115.03 129150 112970 91098 104840 143750 155690 139340 124630 177780 98951 154340 126140 124350 93764 136240 145130 139240 143350 119180 103370 96593 107260 145160 152940 141810 128810 177620 102380 157960 125980 128360 100530 138550 144880 133220 136160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 674190000 28755 3663 27012 54037;54038 43612;43613 43613 2 9606 Homo sapiens 0.021191963472801945 VGAPLICCEIK Unmodified 1258.6414 0.64136442 2485 B4DH39;Q8TAF6;O60488-2;O60488;A0A804HI36;H0Y9A0 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes no 0 0 0 8 0 1 55.942 56.004 2 0.0022534 16141 20230619_1888_Aki_TMTPro18x_K_F8 120.15 81.587 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28756 2485 27013 54039 43614 43614 1 9606 Homo sapiens 0.022389396165181097 VGAPLVCCEIK Unmodified 1244.6257 0.62571436 284 B3KN05;A0A7P0TA76;B2RBE0;A0A024R487;O95573;B3KMA6;A0A7P0T8L6;A0A7P0TB52 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes no 0 0 0 7 0 1 53.403 53.47 3 0.00011119 15113 20230619_1887_Aki_TMTPro18x_K_F7 98.943 74.956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28757 284 27014 54040 43615 43615 1 9606 Homo sapiens 0.013186530994516943 VGDDPAVWQLK Unmodified 1226.6295 0.62953741 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 5.5 0.5 2 2 58.514 58.575 2;3 0.00014295 17537 20230619_1886_Aki_TMTPro18x_K_F6 153.05 105.22 179090 154110 178370 195160 157140 217530 199480 194320 211640 214800 222230 218170 225920 193520 209760 237250 234700 234510 165650 141400 181110 193970 166370 217610 199100 200700 215350 216100 227660 220540 229710 202750 215110 237490 224320 222770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 160690000 28758 1292 27015 54041;54042;54043;54044 43616;43617 43616 2 9606 Homo sapiens 0.02528782189165213 VGDDVEFEVSSDR Unmodified 1452.6369 0.63686721 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;A0A8I5KPQ8;A0A8I5KS07;A0A8I5KW29;A0A8I5KYL4;A0A8I5KNL1;E9PLD4 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 0 1 0 1 50.225 50.225 2 1.4675E-28 14443 20230619_1880_Aki_TMTPro18x_K_F1 265.82 238.93 54053 39280 45532 52045 34705 45575 48524 43553 53399 62766 61008 48849 69211 52610 48661 69939 61197 58055 49881 36083 46846 51415 37357 46514 48285 45172 54471 61981 62487 50406 69360 55089 50652 69275 58410 55278 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52361000 28759 88 27016 54045 43618 43618 1 9606 Homo sapiens -0.07134574791712112 VGDDVEFEVSSDRR Unmodified 1608.738 0.73797824 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;A0A8I5KPQ8;A0A8I5KS07;A0A8I5KW29;A0A8I5KYL4;A0A8I5KNL1;E9PLD4 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 1 1.5 0.5 1 1 44.592 44.633 3 3.5099E-37 12141 20230619_1880_Aki_TMTPro18x_K_F1 237.41 215.78 363150 271960 321800 370150 290240 363360 390840 340660 416350 415610 411820 379680 490620 391940 370050 466870 426700 347900 335300 249860 330250 365520 307070 367270 388930 351800 422620 415050 425880 387690 492340 407820 382040 461100 407170 331990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 538300000 28760 88 27017 54046;54047 43619;43620 43619 2 9606 Homo sapiens -0.042041230890163206 VGDFGDAINWPTPGEIAHK Unmodified 2022.9799 0.97993984 4130 Q6PKG0;Q6PKG0-3;A0A0B4J210;H0YAX9 LARP1 La-related protein 1 yes no 0 0 0 6.5 0.5 1 1 61.655 61.702 3 2.4786E-07 18522 20230619_1887_Aki_TMTPro18x_K_F7 108.49 96.204 158910 117760 163780 176710 139890 159770 151860 166030 164870 205160 204270 222430 223740 191690 188160 224600 203750 253410 146890 108320 165670 173330 147540 162930 152990 170240 169010 205660 208680 223910 226020 200520 193040 226680 195140 240210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164510000 28761 4130 27018 54048;54049 43621 43621 1 9606 Homo sapiens 0.00936907267123388 VGDFGLAR Unmodified 833.43955 0.43955179 1016 A0A0D9SEN2;P21127-3;A0A0D9SER5;A0A0D9SEI3;B4E3D9;P21127-2;P21127-8;P21127;Q9UQ88-3;Q9UQ88-4;Q9UQ88-2;P21127-9;P21127-6;Q5QPR3;Q9UQ88;Q5QPR4;P21127-12;A4VCI5;Q6P5Y5;P21127-4;P21127-10;P21127-5;Q96CA8;Q4VBY6;Q9UQ88-5;Q9UQ88-10;Q13882 CDK11B;CDK11A;CDC2L1;CDC2L2;PTK6 Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A;Protein-tyrosine kinase 6 yes no 0 0 0 6.5 0.5 1 1 48.615 48.698 2 0.0027034 13011 20230619_1887_Aki_TMTPro18x_K_F7 122.5 88.649 149900 130020 143120 147580 159800 184740 177690 174140 211000 141610 138030 132960 146790 114300 158070 156910 154220 127710 138610 119170 146260 148130 165260 183730 179080 177740 209970 144730 145450 134830 150040 120780 160300 155380 147410 121710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121250000 28762 1016 27019 54050;54051 43622 43622 1 9606 Homo sapiens 0.016169600374723814 VGDGDLSAEEIPENEVSLR Unmodified 2027.9647 0.96474329 3896 Q14684;Q14684-2;Q6PJM8 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 0 0 0 1 0 1 55.746 55.746 2 6.5672E-08 16747 20230619_1880_Aki_TMTPro18x_K_F1 153.09 122.26 11600 8827.7 11512 10255 8025.7 12576 9607.1 10362 12439 11543 10569 10989 13499 9568.2 9770.9 15331 11999 13588 10721 8096.7 11644 10274 8689.8 12482 9691 10767 12441 11589 11058 11140 13497 10229 10156 15197 11470 12919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67350000 28763 3896 27020 54052 43623 43623 1 9606 Homo sapiens -0.008120491113686512 VGDHQFLLYSGR Unmodified 1390.6993 0.69934831 2336 B2RXJ9;Q8IYS2;Q8IYS2-2 LOC728138;KIAA2013 Uncharacterized protein KIAA2013 yes no 0 0 0 1 0 1 47.986 47.986 3 0.00087624 13546 20230619_1880_Aki_TMTPro18x_K_F1 89.747 72.081 32410 22581 32276 31828 28552 36625 36531 38826 29992 46189 48902 50364 58050 46468 41568 52181 60941 58985 29940 20761 32749 31447 30182 36698 36201 39694 31744 46372 49682 50805 58161 48389 43684 52694 58107 55959 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49422000 28764 2336 27021 54053 43624 43624 1 9606 Homo sapiens 0.01962660857816445 VGDNDFLEVR Unmodified 1162.5619 0.56185177 155 A0A024R1S5;O00178;B2RDW9;F5H716;F5H257 GTPBP1 GTP-binding protein 1 yes no 0 0 0 2.5 0.5 1 1 52.631 52.677 2 0.071251 15624 20230619_1881_Aki_TMTPro18x_K_F2 70.942 63.129 91556 97986 116000 104440 117520 140010 121200 115910 124280 86591 93909 66832 76275 64481 123820 58363 63095 57763 85009 89697 115770 105470 122040 138330 122100 119290 125100 88571 96935 68732 80599 66293 121350 58945 60919 54889 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82679000 28765 155 27022 54054;54055 43625 43625 1 9606 Homo sapiens -0.012926677416317034 VGDPQELNGITR Unmodified 1297.6626 0.66262845 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 3.5 0.5 1 1 46.398 46.459 2 6.9828E-05 12352 20230619_1883_Aki_TMTPro18x_K_F4 134.98 96.41 174900 143020 178800 156050 125970 156760 160890 155040 183010 233210 247530 253570 251270 210940 216320 272920 254180 253780 161750 131060 180380 156660 136110 158460 161030 160630 187930 232020 251100 255050 254640 222240 222990 272030 242830 241240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 189740000 28766 3606 27023 54056;54057 43626;43627 43627 2 9606 Homo sapiens 0.025703642412281624 VGDQVWLFIDEPR Unmodified 1572.7936 0.79364262 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PGB5;A0A6Q8PHJ2;A0A6Q8PH44 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0 1 63.863 63.909 2 3.0155E-07 19682 20230619_1885_Aki_TMTPro18x_K_F5 171.05 154.42 174380 124620 178570 157650 118660 140160 156570 148210 207680 200480 164810 269510 192560 241840 295140 260690 223610 345060 161150 114430 180020 156350 129160 143250 157310 152360 207070 201950 173300 269160 201030 251100 294220 266480 215480 326400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157500000 28767 1637 27024 54058 43628 43628 1 9606 Homo sapiens 0.030157548892930208 VGDVYIPR Unmodified 917.49707 0.49706667 539;233 J3KP15;Q53FN0;A0A024R8U5;Q01130;B3KUY1;J3QL05;Q8NAK9;Q01130-2;B3KX15;Q6NXQ0;Q8N220;B3KVY2;B3KUF7;A0A024R3A8;Q9BRL6-2;Q9BRL6 SRSF2;SFRS2;SRP46;SRSF8 Serine/arginine-rich splicing factor 2;Serine/arginine-rich splicing factor 8 no no 0 0 0 6 0.816 1 1 1 48.08 48.161 2 0.0051745 12742 20230619_1887_Aki_TMTPro18x_K_F7 124.83 30.427 2789500 2187800 2399600 2819700 2524100 3061300 2909500 2916900 3259700 3497900 3410500 3256800 3714400 2937100 2902800 3965400 3752300 3711500 2575700 2008500 2474900 2798100 2625700 3073100 2922200 3005200 3309000 3496300 3503500 3307700 3742000 3095700 3018800 3950800 3581600 3528000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3549699999.9999995 28768 539;233 27025 54059;54060;54061 43629;43630 43630 2 9606 Homo sapiens 0.035018022430335805 VGEATETALTCLVEK Unmodified 1619.8076 0.80763771 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4;H7C5W9;A8K9K1;Q93084-3;Q93084-5;Q93084-6;Q93084-1;Q93084-7;Q93084;Q93084-4 ATP2A2;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 0 0 0 5.5 0.5 1 1 62.33 62.379 3 3.5653E-14 19165 20230619_1886_Aki_TMTPro18x_K_F6 182.33 157.9 953610 833310 964660 960060 881530 941190 1017600 956700 1035200 970520 950300 822370 1052400 880330 857420 1082100 1114000 1032100 882240 763850 977690 959310 925380 953870 1018800 976930 1050300 975830 982540 844400 1061800 917060 890670 1080700 1062800 981120 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1841499999.9999998 28769 1076 27026 54062;54063 43631;43632;43633 43633 3 9606 Homo sapiens 0.022526195353748335 VGECEASAMLPLECQYLNK Unmodified 2211.001 0.001010917 991 B3KTK5;Q53GS8;H0Y3X6;B3KM78;A0A0C4DFX9;Q9H3P2;C9JEM7;C9JHL4;H7C0W2 NELFA Negative elongation factor A yes no 0 0 0 5.5 0.5 1 1 62.052 62.102 3 0.032976 19071 20230619_1886_Aki_TMTPro18x_K_F6 45.342 35.42 51682 40805 45191 54479 49633 55305 60423 55251 52832 53573 70637 77620 69030 59596 55832 69285 66175 67246 47729 37473 46579 53888 51478 55851 60063 56443 54936 54942 71605 77096 69877 62547 57653 69325 63223 63888 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125170000 28770 991 27027 54064;54065 43634 43634 1 9606 Homo sapiens -0.05604954802174689 VGEEDDGEYR Unmodified 1167.468 0.46801097 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;Q86SE4 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 1 0 1 36.086 36.086 2 4.785799999999999E-19 8383 20230619_1880_Aki_TMTPro18x_K_F1 247.07 180.99 77729 40449 73662 74534 53799 44783 78046 74193 86485 97489 133930 146110 134720 118580 127770 64312 143520 129930 71680 37375 74857 72075 57993 48217 77599 74457 89476 98694 135300 144990 137130 120410 130540 69410 137080 122760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265650000 28771 2005 27028 54066 43635 43635 1 9606 Homo sapiens -0.10902431634576715 VGEEDEEAAEAEAEAEEAER Unmodified 2161.8771 0.87711008 3237 O15240 VGF Neurosecretory protein VGF;Neuroendocrine regulatory peptide-1;Neuroendocrine regulatory peptide-2;Antimicrobial peptide VGF[554-577] yes yes 0 0 0 1 0 1 52.52 52.52 3 3.3193E-13 15386 20230619_1880_Aki_TMTPro18x_K_F1 141.22 140.04 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28772 3237 27029 54067 43636 43636 1 9606 Homo sapiens -0.15735339563343587 VGEEFEEQTVDGRPCK Unmodified 1878.8418 0.84179138 3522 P29373 CRABP2 Cellular retinoic acid-binding protein 2 yes yes 0 0 1 2 0 1 46.079 46.159 3 1.2876E-28 12662 20230619_1881_Aki_TMTPro18x_K_F2 182.61 165.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28773 3522 27030 54068 43637 43637 1 9606 Homo sapiens -0.0624758404367185 VGEFCHNR Unmodified 1017.445 0.44504788 134 A0A024R1A3;P22314-2;P22314;Q5JRR9;Q5JRS0;Q5JRS2 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 4.5 1.12 1 1 1 1 32.414 32.485 2;3 4.0757E-05 6570 20230619_1885_Aki_TMTPro18x_K_F5 172.14 131.79 283660 219010 255510 259260 306420 304590 302740 312450 394810 319490 392740 394820 365910 333850 345290 389360 427510 388130 261980 200900 262640 259200 314110 304860 308310 318800 396580 324930 401850 395450 373570 349140 356240 390210 407980 368810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1427200000 28774 134 27031 54069;54070;54071;54072 43638;43639 43638 2 9606 Homo sapiens -0.06297684442370155 VGEFSGANK Unmodified 907.43995 0.43994572 3097 H9ZYJ2;P10599;P10599-2 TXN Thioredoxin yes no 0 0 0 6.29 1.03 2 2 2 1 43.995 44.07 2;3 0.00015052 11216 20230619_1886_Aki_TMTPro18x_K_F6 166.52 121.88 1225200 734840 1229400 1322500 1769700 1772700 1419100 1488000 1689800 1153200 1694300 1720400 1410700 1417200 1535900 857190 1834500 1696100 1131100 678230 1256900 1291900 1785000 1751200 1459700 1530800 1704000 1201700 1726200 1709500 1456400 1442200 1572100 919800 1751400 1602600 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4744600000 28775 3097 27032 54073;54074;54075;54076;54077;54078;54079 43640;43641;43642;43643 43641 4 9606 Homo sapiens -0.01747665033337853 VGEGDKEDATRR Unmodified 1331.643 0.64295564 50 Q8WXX5;A0A024QZN2 DNAJC9;hCG_2024613 DnaJ homolog subfamily C member 9 yes no 0 0 2 3 0 1 30.833 30.919 4 0.00030405 5944 20230619_1882_Aki_TMTPro18x_K_F3 101.53 78.16 47436 26894 68972 73564 105010 108310 80939 107500 78112 53109 88477 97487 54696 64938 82643 23220 81563 58815 43943 25017 68835 70814 105440 106760 83002 108330 80020 57913 88923 95752 58333 65778 83142 26221 77892 55569 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37383000 28776 50 27033 54080 43644 43644 1 9606 Homo sapiens -0.009600117695526933 VGEGFEEETVDGR Unmodified 1422.6263 0.62630252 2949 P29762;F1T0F7;B5MCB5 CRABP1 Cellular retinoic acid-binding protein 1 yes no 0 0 0 1 0 1 46.78 46.78 2 8.8408E-11 12981 20230619_1880_Aki_TMTPro18x_K_F1 211.64 192.97 96595 86195 90579 102670 202570 235230 156090 142850 175480 150210 141930 155560 172360 141790 156570 158910 143670 144340 89323 79030 94314 103960 200420 225630 160520 152420 176430 151730 148650 157160 174150 147610 158790 158630 137590 137250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1413900000 28777 2949 27034 54081 43645 43645 1 9606 Homo sapiens -0.06810557446169696 VGEGFEEETVDGRK Unmodified 1550.7213 0.72126554 2949 P29762;F1T0F7;B5MCB5 CRABP1 Cellular retinoic acid-binding protein 1 yes no 0 0 1 1.5 0.5 1 1 44.791 44.833 3 2.8575E-23 12062 20230619_1881_Aki_TMTPro18x_K_F2 241.76 224.36 1209700 1088000 1110600 1292300 2639200 3208300 1814000 1896200 2403200 1838300 1645000 1869600 1838200 1651200 1747600 2309700 2179300 2139500 1118500 997490 1161000 1311700 2602000 3067500 1893400 2024000 2385300 1864400 1733600 1889500 1867300 1744600 1805600 2299100 2080700 2034000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1562099999.9999998 28778 2949 27035 54082;54083 43646 43646 1 9606 Homo sapiens -0.03206623974983813 VGEGPGVCWLAPEQTAGK Unmodified 1854.8934 0.89343302 4514 Q9H4A4;A6NKB8;Q7RU04;A0A087WU27;A0A087WUS4 RNPEP Aminopeptidase B yes no 0 0 0 6.5 0.5 1 1 59.045 59.102 3 9.3952E-11 17731 20230619_1886_Aki_TMTPro18x_K_F6 144.73 123.92 58694 43139 49275 51481 41125 48031 49226 57768 59133 63173 65408 72656 71952 69522 70978 79070 72785 75384 54166 39583 50727 51284 43639 49054 49516 58470 59955 63826 67161 73221 73235 72270 72338 79085 69640 71629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 350910000 28779 4514 27036 54084;54085 43647 43647 1 9606 Homo sapiens 0.00018204440902991337 VGEIFSAAGAAFTK Unmodified 1367.7085 0.70851601 2985 F8W038;Q8IXM2-2;Q8IXM2;Q8IXM2-3 C17orf49;BAP18 Chromatin complexes subunit BAP18 yes no 0 0 0 3 0 1 63.171 63.201 3 0.00015947 19763 20230619_1882_Aki_TMTPro18x_K_F3 95.264 74.601 44488 42416 47457 61463 44724 58696 59936 49238 64907 40036 57608 53631 63892 52058 63507 60991 57288 61607 41202 38963 48027 60419 47138 59304 59671 50784 65430 41437 59715 53847 64967 54224 64229 61193 54903 58492 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 414280000 28780 2985 27037 54086 43648 43648 1 9606 Homo sapiens 0.03937009423452764 VGEIHVK Unmodified 780.44939 0.4493882 2527 B4DLG2;O75152;Q0D2N5;E9PBY7;E9PQ61;P0DQW0;B4DYM8;A0A8V8TLD8;A0A1B0GTU1;A0A024R8H9 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 0 0 0 6.5 0.5 1 1 40.738 40.806 3 0.0066462 9575 20230619_1887_Aki_TMTPro18x_K_F7 100.45 21.955 117540 80537 118050 127420 138760 155510 130000 133000 173080 131740 141840 139600 161670 121970 128730 126970 167530 152240 108580 74154 120240 125110 142340 154530 132910 137390 172550 133560 147810 140750 162750 126780 133590 128940 159810 144390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68479000 28781 2527 27038 54087;54088 43649;43650 43650 2 9606 Homo sapiens 0.05038148042854118 VGEKPVEVISLSR Unmodified 1411.8035 0.80347903 3290 O75054;O75054-2 IGSF3 Immunoglobulin superfamily member 3 yes no 0 0 1 8 0 1 50.449 50.526 3 0.021879 13718 20230619_1888_Aki_TMTPro18x_K_F8 61.649 46.959 157130 135690 156830 152320 138760 151190 139980 131910 160550 199090 179610 168780 197570 151970 188750 194430 174760 160440 145340 124350 159010 152510 145600 152610 141800 137920 163410 196640 184120 172130 200500 159610 191340 192810 167240 152800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31767000 28782 3290 27039 54089 43651 43651 1 9606 Homo sapiens 0.11404942894660053 VGELFQR Unmodified 847.4552 0.45520186 3949 Q16352 INA Alpha-internexin yes yes 0 0 0 7 0 1 49.845 49.926 2 0.02504 13503 20230619_1887_Aki_TMTPro18x_K_F7 98.418 69.995 182260 161340 178420 131040 43794 56176 69917 66820 79405 153850 164320 165930 160220 135510 150960 181040 181090 182090 168590 147470 179170 134170 56952 62959 69630 70011 83972 151040 164420 166850 163190 143200 155500 181160 172980 172930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180630000 28783 3949 27040 54090 43652 43652 1 9606 Homo sapiens 0.02537246554527428 VGENADSQIK Unmodified 1059.5197 0.51965261 3399 P07305;P07305-2 H1F0 Histone H1.0;Histone H1.0, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 40.747 40.798 3 0.016462 9975 20230619_1882_Aki_TMTPro18x_K_F3 64.439 39.222 27765 18246 29833 30520 42376 40589 42156 59605 71286 33473 40745 51282 39424 40446 45020 32914 49425 54677 25657 16816 30327 29953 43017 40694 43413 58806 69617 35810 43261 50851 40613 41670 45856 34456 47283 51682 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157840000 28784 3399 27041 54091;54092 43653 43653 1 9606 Homo sapiens -0.007726431500032049 VGEPVALSEEER Unmodified 1313.6463 0.64630969 3850 Q13435;E9PPJ0;Q7Z3K9;E9PJ04;H0YCG1;E9PJT3;E9PIL8 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 0 1 0 1 45.199 45.199 2 1.4344E-17 12360 20230619_1880_Aki_TMTPro18x_K_F1 231.42 183.85 268870 198280 220870 271140 255770 303280 280590 273180 345170 322200 321140 301810 329430 279660 280120 357290 323800 314760 248100 182190 229230 268110 263960 303450 283400 282480 347020 322490 330790 306690 333650 293270 288550 355210 309320 299450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1299100000 28785 3850 27042 54093 43654 43654 1 9606 Homo sapiens 0.0020323828443906677 VGEVCHITCKPEYAYGSAGSPPK Unmodified 2506.1621 0.16207966 3789 Q02790;B2R9U2;F5H1U3 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 1 4.5 3.5 1 1 47.084 47.108 4 1.4629E-13 12276 20230619_1888_Aki_TMTPro18x_K_F8 142.41 130.79 108800 93296 110140 123460 90304 86658 95728 95316 72764 130340 120500 130660 131000 108130 100370 132430 129960 161410 100640 85645 111510 121710 95337 90674 95628 97792 77608 129710 121900 131790 131880 113640 104420 134200 124280 152880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171420000 28786 3789 27043 54094;54095 43655;43656 43656 2 9606 Homo sapiens -0.030754891646211036 VGEVIVTK Unmodified 843.50657 0.50656873 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6;B7Z532 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 6 0.816 1 1 1 49.36 49.439 3 0.013225 13279 20230619_1887_Aki_TMTPro18x_K_F7 71.491 13.371 389130 270660 309510 354570 394250 455260 441040 415930 559350 433830 483310 497440 560820 489780 423190 648210 612540 537230 358870 248650 322660 352390 404580 451690 445350 428120 559720 439820 502780 502300 563730 513550 444410 641980 583730 511710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2030199999.9999998 28787 272 27044 54096;54097;54098 43657;43658 43658 2 9606 Homo sapiens 0.07855570528579392 VGEVIVTKDDAMLLK Oxidation (M) 1645.8961 0.89605879 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6;B7Z532 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 1 1 7 0 1 57.235 57.29 4 0.0012911 16670 20230619_1887_Aki_TMTPro18x_K_F7 91.355 68.88 246810 283220 267750 267220 353200 241530 316900 308650 204700 274780 284060 174490 190180 143750 334950 169670 154090 108900 228950 258960 271350 271180 357550 248340 318300 309750 218380 276120 283220 180890 203560 150750 327160 167280 148870 104250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 316740000 28788 272 27045 54099 43659 43659 163 1 9606 Homo sapiens 0.09894659845872411 VGEVIVTKDDAMLLK Unmodified 1629.9011 0.90114416 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6;B7Z532 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 1 7.5 0.5 1 1 60.762 60.799 3 7.3712E-14 18097 20230619_1887_Aki_TMTPro18x_K_F7 176.04 143.31 844640 942090 798660 927560 903530 857230 1006800 1261400 436130 1404300 511130 541270 637040 428760 1172600 441130 409410 228530 782440 861720 817410 937990 930380 882360 992530 1262900 485540 1382200 528400 582390 669900 447720 1136700 433820 397850 219980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 486620000 28789 272 27045 54100;54101 43660;43661 43660 2 9606 Homo sapiens 0.1113896370850398 VGEVTYVELFK Unmodified 1282.6809 0.68090428 923 A0A0A0MQW0;A0A0A0MR39;Q9P2K5-2;Q9P2K5;Q9Y655;A0A087WUT0 MYEF2 Myelin expression factor 2 yes no 0 0 0 7 0 1 62.743 62.779 2 7.7106E-12 19064 20230619_1887_Aki_TMTPro18x_K_F7 227.88 180.99 159280 144030 159160 168930 105180 102150 137160 130070 145030 184100 170130 190050 192400 171680 169410 203250 187030 217580 147380 132040 160890 167750 114260 109120 136800 132540 148500 183250 174480 191950 194620 179360 173840 204440 178990 206400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232250000 28790 923 27046 54102 43662 43662 1 9606 Homo sapiens 0.050871061632278725 VGEVTYVELLMDAEGK Unmodified 1751.8652 0.86515259 3631 P52272-2;P52272;A0A087X0X3;M0R019;M0R2T0;B4DEG4;M0R0N3 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 3.67 1.25 1 1 1 64.872 64.893 3 2.8184E-11 20115 20230619_1885_Aki_TMTPro18x_K_F5 159.18 139.51 111410 83212 84904 102260 91897 110850 111610 110110 123910 111500 106890 106630 130100 114400 118050 136240 125250 133670 102760 76370 88685 101810 95576 111400 111740 112580 124860 112510 111500 108800 131510 118900 120750 136360 119820 126960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 651360000 28791 3631 27047 54103;54104;54105 43663;43664;43665 43665 3 9606 Homo sapiens 0.019294617409741477 VGEVTYVELLMDAEGK Oxidation (M) 1767.8601 0.86006721 3631 P52272-2;P52272;A0A087X0X3;M0R019;M0R2T0;B4DEG4;M0R0N3 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 1 0 3 0.816 1 1 1 63.831 63.847 3 8.7581E-06 19975 20230619_1883_Aki_TMTPro18x_K_F4 100.45 77.446 35976 21530 27817 32431 30764 34283 33034 29019 38714 39424 38817 42615 38258 32570 37556 44069 38831 42274 33148 19824 29008 31858 31813 34396 33342 30307 39136 39384 39826 42761 39032 34530 38311 43980 37165 40158 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 195100000 28792 3631 27047 54106;54107;54108 43666;43667 43667 2324 2 9606 Homo sapiens 0.0068515787834257935 VGFAEAAR Unmodified 819.4239 0.42390173 1270 F8W787;A0A1B0GW44;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;V9HWI3;C9JH19;P07339;A0A1B0GVP3;A0A0S2Z3L4 CTSD;HEL-S-130P Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 0 0 0 5 0.816 1 1 1 40.805 40.879 2 0.0042906 9858 20230619_1885_Aki_TMTPro18x_K_F5 116.88 64.247 398580 294700 348700 422690 575840 585930 617840 656350 798750 388390 408560 393990 390960 343850 428000 432390 478670 362100 367960 270930 362350 418360 581230 581530 625470 658110 786550 407710 436790 398430 401710 360850 437340 429210 456690 345100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1127300000 28793 1270 27048 54109;54110;54111 43668;43669 43668 2 9606 Homo sapiens 0.006966735204173347 VGFITYNK Unmodified 940.50182 0.5018177 2096 B3KM89;A8K6V0;O94855;O94855-2;E9PDM8;Q49AI3;E9PC44;Q4W5D3 SEC24D Protein transport protein Sec24D yes no 0 0 0 3.5 0.5 1 1 53.71 53.746 3 0.0023268 15824 20230619_1882_Aki_TMTPro18x_K_F3 90.777 66.804 88066 70845 82485 95679 96118 115710 114790 104400 128040 104280 92108 85595 112500 77633 96709 109960 100100 97921 81381 65065 84574 94805 99348 115180 114990 107440 128240 104880 97048 87522 113310 82141 98876 109260 95727 93142 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44571000 28794 2096 27049 54112;54113 43670 43670 1 9606 Homo sapiens 0.029186863857944445 VGFVTYNK Unmodified 926.48617 0.48616764 49 G5EA31;A0A024QZM6;P53992;B4DSN3 SEC24C Protein transport protein Sec24C yes no 0 0 0 3 0 1 50.926 50.997 2 0.00030767 14587 20230619_1882_Aki_TMTPro18x_K_F3 166.96 119.89 95705 71808 88116 99910 93443 108840 105620 113310 130330 104980 104580 100050 111640 86403 114080 116730 112930 110020 88392 65989 90307 98682 97061 109430 106550 115190 130290 106430 108810 101390 113780 91219 115910 116430 108040 104580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81337000 28795 49 27050 54114 43671 43671 1 9606 Homo sapiens 0.019983998687507665 VGGDVPETNYLFMGDFVDR Unmodified 2129.9728 0.97280556 374 Q5U086;A0A024R625;P60510;I3L4X0 PPP4C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 4 catalytic subunit yes no 0 0 0 4.5 0.5 1 1 63.897 63.924 3 7.882E-05 19723 20230619_1885_Aki_TMTPro18x_K_F5 84.499 75.498 76021 65070 79013 85597 75786 87586 87114 86287 83543 101330 98252 100870 102970 91161 97542 106430 99206 111690 70337 59730 80014 84774 79271 88371 87104 88653 85993 101540 100360 102080 104700 95162 99430 106980 94990 105980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48140000 28796 374 27051 54115;54116 43672;43673 43673 2 9606 Homo sapiens -0.04698193395643102 VGGFPNFLSNAFVSTAK Unmodified 1754.8992 0.89917033 2313 K7EIN2;B2RD96;Q9BRJ7 NUDT16L1 Protein syndesmos yes no 0 0 0 6 0 1 64.296 64.342 3 4.0997E-06 20076 20230619_1886_Aki_TMTPro18x_K_F6 74.141 62.871 30359 22670 27949 29946 27853 42884 38365 27590 36364 38334 34568 36825 48646 35965 35165 39420 43241 51351 28038 20821 28627 29792 29308 41996 37980 29556 37117 38142 36178 37406 48529 37363 36465 40209 41351 48617 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51279000 28797 2313 27052 54117 43674 43674 1 9606 Homo sapiens 0.051916710149043865 VGGGEYIELK Unmodified 1063.555 0.55497548 930 A0A0A0MTS7;D3DPG0;A0A0A0MRA3;C0JYZ2;D3DPF9;Q8WZ42-3;Q8WZ42-2;Q8WZ42-13;Q8WZ42-8;Q8WZ42;Q8WZ42-4;Q8WZ42-7;Q8WZ42-11;Q8WZ42-5;Q8WZ42-9;Q8WZ42-10;Q8WZ42-12 TTN Titin yes no 0 0 0 4 0 1 51.205 51.232 2 0.0039049 14537 20230619_1883_Aki_TMTPro18x_K_F4 111.82 54.638 117800 89401 97895 111550 78670 122160 104630 116300 144520 135960 141480 144050 171450 152470 108190 202750 184860 174100 108720 82056 100930 110960 84339 122490 105260 119720 144830 136660 146530 146300 171160 159570 115880 201040 176050 165700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48723000 28798 930 27053 54118 43675 43675 1 9606 Homo sapiens 0.025740193777892273 VGGGGTAGGDRWEGEDEDEDVK Unmodified 2233.936 0.93596236 355 A0A024R5S5;O75822;O75822-3;O75822-2 EIF3S1;EIF3J Eukaryotic translation initiation factor 3 subunit J yes no 0 0 1 1 0 1 43.923 43.923 3 0.010796 11858 20230619_1880_Aki_TMTPro18x_K_F1 56.719 47.555 12953 9213.5 12350 13846 9046.4 19109 12673 13158 19794 20204 20312 27698 28431 24954 13861 38474 34491 54210 11963 8476.5 12566 13658 9843.6 18757 12791 14042 19792 20280 21198 27693 28099 26567 15633 39230 32938 51250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41255000 28799 355 27054 54119 43676 43676 1 9606 Homo sapiens -0.13164818478435336 VGGHAAEYGAEALER Unmodified 1528.727 0.72701962 2774 CON__P01966 yes yes 0 0 0 3 0.816 1 1 1 41.473 41.534 3 4.6966E-43 10224 20230619_1882_Aki_TMTPro18x_K_F3 227.92 104.16 + 69517 78795 103040 90952 141000 174800 126720 144090 182630 464340 650460 951530 401340 467420 602350 362280 390690 577300 64691 72170 102420 91965 143230 169710 130680 157910 201990 466000 636700 925360 427350 491770 596070 378730 377150 545360 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5853899999.999999 28800 2774 27055 54120;54121;54122 43677;43678;43679 43678 3 9606 Homo sapiens -0.016194806726161914 VGGNIEVLGFNAR Unmodified 1344.715 0.71499837 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y7I0;A0A2R8Y7M9;Q8TDI0;A0A2R8Y5M9;K7EMY3;Q659D0;Q659F1;A0A2R8YE38;B3KRD4;Q6ZU36 CHD4;CHD5;DKFZp434P202;DKFZp434K213 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 yes no 0 0 0 1 0 1 57.391 57.391 2 2.3881E-21 17410 20230619_1880_Aki_TMTPro18x_K_F1 237.84 213.06 173680 147490 154510 170990 141260 170610 179930 171840 182220 199920 193010 180910 205520 178130 196780 221110 197890 211390 160490 135220 158480 170780 148940 172580 179270 176250 186040 199940 198020 184510 208950 186110 200450 220900 189430 200840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 318930000 28801 1005 27056 54123 43680 43680 1 9606 Homo sapiens 0.056429473748494274 VGGPVYR Unmodified 746.40752 0.40752338 2124 A8K9T9;A8K8N7;O15067;B4DJ26;J3KT98 PFAS Phosphoribosylformylglycinamidine synthase yes no 0 0 0 7.5 0.5 1 1 36.677 36.704 2 0.010769 8139 20230619_1888_Aki_TMTPro18x_K_F8 117.54 86.87 180140 119690 161350 172990 191950 195480 179290 178380 232570 206700 241660 222160 251040 194640 200110 213510 279180 230720 166230 110100 165960 170550 196630 195570 183170 184180 234200 207930 247720 223950 253430 202790 208790 215200 266020 219130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 96538000 28802 2124 27057 54124;54125 43681;43682 43682 2 9606 Homo sapiens 0.024175923543225508 VGGRLEDTK Unmodified 973.51926 0.51925868 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;B4DZY9 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 1 5.5 0.5 1 1 36.818 36.91 3 0.0040995 8244 20230619_1885_Aki_TMTPro18x_K_F5 83.883 45.723 163290 135170 198830 172800 294670 154210 198550 225280 159880 174440 211410 148840 178290 138750 189250 94153 226240 142300 151270 124050 200050 171340 294330 159440 204790 223770 167300 178060 212680 152010 183440 141280 193710 98370 215520 134950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139010000 28803 2633 27058 54126;54127 43683;43684 43683 2 9606 Homo sapiens 0.03143981920788974 VGGSDEEASGIPSR Unmodified 1359.6266 0.62663688 973 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55-2;Q9NQ55;Q9NQ55-3;A8MV53;H7C446 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog yes no 0 0 0 1.5 0.5 1 1 38.873 38.906 2 4.8212E-08 9611 20230619_1880_Aki_TMTPro18x_K_F1 177.04 159.6 25967 21887 23703 26924 33089 34142 28746 31515 37673 34025 35880 39358 41706 30523 33736 40529 43632 36257 23998 20078 24423 26867 33513 33922 29513 32432 37809 34419 37167 39412 41979 32316 35025 40311 41600 34510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63475000 28804 973 27059 54128;54129 43685 43685 1 9606 Homo sapiens -0.038791377262896276 VGGTKPAGGDFGEVLNSAANASATTTEPLPEK Unmodified 3085.5204 0.52038748 3659 P55327-2;P55327-4;P55327;P55327-7;P55327-5;P55327-6;P55327-3;E5RK35 TPD52 Tumor protein D52 yes no 0 0 1 8 0 1 59.073 59.114 4 1.0241E-21 17455 20230619_1888_Aki_TMTPro18x_K_F8 156.37 144.85 22634 21470 25484 19613 6484 6924.7 8687.1 7082 5857.2 20040 21132 12233 15039 9522.6 18336 14015 10220 9655.7 20972 19636 25315 19829 8283.9 8000.3 8598.8 7596.4 6778.6 19292 20640 12694 15655 10166 18117 13784 9853.4 9219.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25946000 28805 3659 27060 54130 43686 43686 1 9606 Homo sapiens 0.06104809706175729 VGGTSDVEVNEK Unmodified 1232.5885 0.58846046 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 2.29 1.03 2 2 2 1 42.512 42.56 2;3 6.4322E-10 10970 20230619_1881_Aki_TMTPro18x_K_F2 181.31 125.91 323540 152090 363240 400290 500030 613170 429390 527910 555430 386480 568930 677840 602460 561470 508630 325330 713780 686270 298680 141520 368050 386010 507260 601120 441160 541110 558550 407320 585180 670270 609830 570660 529070 351620 680760 648090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3431199999.9999995 28806 272 27061 54131;54132;54133;54134;54135;54136;54137 43687;43688 43687 2 9606 Homo sapiens -0.01853023640956053 VGGTSDVEVNEKK Unmodified 1360.6834 0.68342347 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 1 4 0.707 1 2 1 41.279 41.337 3;4 6.9834E-06 10122 20230619_1883_Aki_TMTPro18x_K_F4 125.82 109.68 443000 255480 599610 586460 902340 808450 714730 803070 627690 568430 819040 660860 600210 492280 773330 303600 594880 429840 410070 236790 600340 567430 905990 800260 729300 814030 651610 589580 821070 661050 627170 503580 770790 316920 569760 407530 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2191000000 28807 272 27062 54138;54139;54140;54141 43689;43690;43691 43690 3 9606 Homo sapiens 0.017509098302070925 VGGVQSLGGTGALR Unmodified 1270.6993 0.69934831 1234 Q2TU84;A0A140VK69;P17174;P17174-2;B7Z1I2 GIG18;GOT1 Aspartate aminotransferase;Aspartate aminotransferase, cytoplasmic yes no 0 0 0 2 0 1 46.792 46.868 2 8.6486E-16 12994 20230619_1881_Aki_TMTPro18x_K_F2 198.74 122.52 94299 77791 95237 96763 84018 70222 91364 96153 63049 118020 130180 134350 132130 108130 123760 137730 140330 149130 87207 71375 96468 95864 88087 73698 90954 97049 68716 118420 130550 134760 134350 114000 126990 138520 134170 141490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172870000 28808 1234 27063 54142 43692 43692 1 9606 Homo sapiens 0.07482660857817791 VGHFDPVTR Unmodified 1026.5247 0.52467841 4688 Q9UNE7;Q9UNE7-2;H3BTA3 STUB1 E3 ubiquitin-protein ligase CHIP yes no 0 0 0 6.5 0.5 1 1 38.296 38.369 3 0.00021875 8599 20230619_1887_Aki_TMTPro18x_K_F7 123.86 96.557 125850 44077 95602 129030 136180 119400 128760 121200 151410 140180 166970 160250 157410 138170 137680 153660 137860 148280 115720 41200 100410 122990 137900 121440 130920 124280 153540 141290 170090 161050 160020 144030 140460 153840 131980 140860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143080000 28809 4688 27064 54143;54144 43693;43694 43694 2 9606 Homo sapiens 0.012477055032604767 VGHSELVGEIIR Unmodified 1307.7197 0.7197494 3566 P38606-2;P38606;A0A994J738;A0A994J477;C9JVW8;C9JA17 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 0 5.5 0.5 1 1 46.811 46.895 3 4.6343E-18 12386 20230619_1885_Aki_TMTPro18x_K_F5 191.29 138.5 420970 111330 296570 411310 296920 289320 316360 340220 461380 354220 469400 476700 432990 406700 391680 489890 403530 508420 386670 104990 312200 388400 309220 302510 322430 344700 461550 361130 479570 476250 441330 425970 400280 491710 386700 482310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 622210000 28810 3566 27065 54145;54146 43695;43696 43695 2 9606 Homo sapiens 0.07819831517599596 VGIADGHR Unmodified 823.43005 0.43004974 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;Q8WTZ9;O14943 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 4 0 1 30.048 30.115 2 0.055715 5627 20230619_1883_Aki_TMTPro18x_K_F4 68.312 31.218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28811 1831 27066 54147 43697 43697 1 9606 Homo sapiens 0.011271917519479757 VGIEAAEMLLANLR Unmodified 1498.8177 0.81774889 2123 A8K8K1;O00442;O00442-2 RTCA RNA 3'-terminal phosphate cyclase yes no 0 0 0 2 0 1 66.619 66.626 3 3.1789E-05 21472 20230619_1881_Aki_TMTPro18x_K_F2 90.412 75.44 3526 1947.1 3087.9 3684.6 4736 3728.2 4350.8 4750 5410.9 3211.6 4973.4 3256.5 4784.5 3234.4 4057.6 4819.3 3321.2 2632.5 3250.4 1799.2 3200.2 3576.6 4769.1 3790.5 4441 4739.4 5425 3332.6 5102.1 3316 4847.4 3420.9 4102.5 4693.7 3180.1 2526.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1945900 28812 2123 27067 54148 43698 43698 1 9606 Homo sapiens 0.08829272051298176 VGIFTGAR Unmodified 819.46029 0.46028724 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;F8VZQ1;F8VX13;F8VVE3;F8VYK8;F8VUB8;F8VW30;F8VTQ3;F8VSF7 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 3.5 0.5 1 1 47.771 47.831 2 0.0074457 13142 20230619_1882_Aki_TMTPro18x_K_F3 107.59 81.37 353730 307720 340220 346040 345820 343710 357100 343520 406620 328240 319950 315660 319380 278120 387090 350880 385750 322290 327110 282010 346780 346430 358840 347950 360950 350660 407850 332310 332490 319840 329310 291920 392120 349980 368650 306650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 486020000 28813 116 27068 54149;54150 43699 43699 1 9606 Homo sapiens 0.04333550417140941 VGIGAFPTEQDNEIGELLQTR Unmodified 2286.1492 0.14919002 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 0 0 5 0.816 1 1 1 63.64 63.673 3 1.9551000000000002E-30 19877 20230619_1883_Aki_TMTPro18x_K_F4 212.83 196.41 15770 15930 14407 14760 15477 17495 15638 18287 19751 20842 19386 22227 21837 16615 20112 21112 18778 23756 14593 14568 14766 15054 16009 17512 15894 18683 19890 20961 20034 22297 22111 17575 20415 21288 18014 22518 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 524910000 28814 351 27069 54151;54152;54153 43700 43700 1 9606 Homo sapiens 0.057561390392493195 VGILLDEASGVNK Unmodified 1313.7191 0.7190807 3784 Q01780-2;Q01780;B4DKG8;Q59G73;B4DFE4 EXOSC10 Exosome component 10 yes no 0 0 0 6 0 1 61.636 61.691 3 4.0929E-05 18847 20230619_1886_Aki_TMTPro18x_K_F6 116.54 85.649 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28815 3784 27070 54154 43701 43701 1 9606 Homo sapiens 0.0747699207788628 VGINYQPPTVVPGGDLAK Unmodified 1823.9781 0.97814893 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;B4DN58;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;P0DPH7;P0DPH8;Q1ZYQ1;B4DQK4;Q9UQM3;P0DPH7-2;C9J2C0;Q9NY65-2;Q9NY65;Q6PEY2;Q7Z3M3;A0A7P0T945;Q8N532;V9GZ17 TUBA1B;TUBA4A;TUBA1A;TUBA1C;TUBA2;TUBA8;TUBA3E;DKFZp686L04275 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain no no 0 0 0 3.43 2.32 2 1 1 1 1 1 59.441 59.461 2;3;4 1.6131E-07 18233 20230619_1881_Aki_TMTPro18x_K_F2 119.68 105.65 155100 111640 134080 140490 113910 141520 134530 130400 142260 155250 152940 163630 169650 152160 155500 171510 165640 182460 143150 102500 137690 139520 120640 142740 134750 134700 145010 155810 157230 165310 172000 158350 159030 172610 158510 173130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 21911000000 28816 2408;3747;4144 27071 54155;54156;54157;54158;54159;54160;54161 43702;43703;43704 43703 3 9606 Homo sapiens 0.09911898249129081 VGIPVTDENGNR Unmodified 1269.6313 0.63132832 4537 Q9H9B4 SFXN1 Sideroflexin-1 yes yes 0 0 0 4 0 1 43.212 43.256 2 0.048921 10946 20230619_1883_Aki_TMTPro18x_K_F4 64.297 46.137 21043 15728 19924 21735 21718 24131 19891 21752 32096 27705 28293 27410 30492 23913 24317 28598 30553 33127 19439 14453 20368 21481 22397 24162 20543 22540 31850 27687 29285 27721 30750 25050 25203 28901 29190 31406 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9273700 28817 4537 27072 54162 43705 43705 1 9606 Homo sapiens 0.007297912071408064 VGIQQGLLSQSTR Unmodified 1385.7627 0.76267685 4336 Q96DI9;Q9BY77;F6VRR5;B4E0L0;Q9BY77-2;F8WCX5;Q659C6;B4DSH9;Q6R954;Q8WUT1 POLDIP3;DKFZp434G0310;PDIP46 Polymerase delta-interacting protein 3 yes no 0 0 0 3 0 1 49.019 49.097 2 1.1890000000000001E-35 13740 20230619_1882_Aki_TMTPro18x_K_F3 246.08 221.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28818 4336 27073 54163 43706 43706 1 9606 Homo sapiens 0.0852260157503224 VGIVAWHPTAR Unmodified 1205.6669 0.66692597 676 Q9ULV4-3;Q9ULV4-2;Q9ULV4;Q59EA2;A0A024RBI5;B3KN06;Q53G58;B4E3S0;F8VTT6;F8W1H8;F8VVB7;F8VRE9;F8VSA4;F8VUX3;F8VV53 CORO1C Coronin-1C;Coronin yes no 0 0 0 4 0 1 45.981 46.025 3 0.0066855 12192 20230619_1883_Aki_TMTPro18x_K_F4 58.172 41.794 70296 40568 66976 62428 61928 76307 62494 66622 80768 62077 59941 53671 59947 44962 51309 55510 53474 47914 64856 37371 68208 61414 64845 75834 63570 68588 80377 62765 62425 54588 60736 47249 52467 55184 51104 45609 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27840000 28819 676 27074 54164 43707 43707 1 9606 Homo sapiens 0.07231918245452107 VGKDELFALEQSCAQVVLQAANER Unmodified 2674.3385 0.33846413 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 1 7 0 1 63.233 63.266 4 5.6301E-05 19364 20230619_1887_Aki_TMTPro18x_K_F7 85.423 72.868 16315 12930 22647 19351 12741 18068 19100 19767 15688 23996 30604 28727 24853 19943 24051 29574 25977 44955 15131 11890 22314 19003 14191 18390 18818 20193 16778 24139 30433 28667 25494 21402 24617 30394 24968 42466 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4160099999.9999995 28820 1426 27075 54165 43708 43708 1 9606 Homo sapiens 0.06826843270255267 VGKEDSSSAEFLEK Unmodified 1524.7308 0.7307676 3862 Q59GU6;Q53HL9;Q53GY8;Q13596;Q13596-2;Q13596-3;H0YK42 SNX1 Sorting nexin-1 yes no 0 0 1 4 0 1 48.74 48.778 3 0.011463 13423 20230619_1883_Aki_TMTPro18x_K_F4 69.331 44.537 141220 117810 152980 144360 150720 148090 147900 150970 148350 182020 209750 168330 172520 135680 171630 137380 124270 95990 130690 108070 154300 143720 156460 149600 149440 154850 153640 181770 210410 170420 177000 141110 171730 135890 119170 91714 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87947000 28821 3862 27076 54166 43709 43709 1 9606 Homo sapiens -0.010608556894339927 VGLADLHPDVFATAPR Unmodified 1677.8839 0.88385462 438 K7EKI4;K7ELF1;K7ELQ0;K7ES61;A0A024R7C5;X6RAY8;Q9BYD3-2;Q9BYD3 MRPL4 39S ribosomal protein L4, mitochondrial yes no 0 0 0 7.5 0.5 1 1 56.379 56.437 3 1.7749E-13 16307 20230619_1888_Aki_TMTPro18x_K_F8 169.92 144.6 207550 163640 204500 198310 213300 233510 196650 202970 232020 236540 241410 225520 249300 205660 226140 236080 226140 225910 191840 150130 208050 197920 220460 232790 200460 210330 234860 236950 247470 228800 253010 214440 230420 236180 216370 214680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 790470000 28822 438 27077 54167;54168 43710;43711 43711 2 9606 Homo sapiens 0.07202804217672565 VGLEPPPGKR Unmodified 1048.6029 0.60292873 4063 Q5TDE9;Q9BSD7;Q5TDF0 C1orf57;NTPCR Cancer-related nucleoside-triphosphatase yes no 0 0 1 1 0 1 40.385 40.385 3 0.0038822 10233 20230619_1880_Aki_TMTPro18x_K_F1 74.424 50.573 107050 85737 106900 100430 128990 131520 116290 117260 136000 111150 122490 114150 125970 100310 116290 121960 136810 106550 98973 78628 108880 100650 131830 130340 118620 120590 136850 112810 126410 115340 127980 105080 119570 121350 130490 101470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85425000 28823 4063 27078 54169 43712 43712 1 9606 Homo sapiens 0.08057138088520333 VGLIAAR Unmodified 698.44391 0.44390889 3734 P62917;B4DVG7;E9PKU4;E9PP36 RPL8 60S ribosomal protein L8 yes no 0 0 0 2.5 1.12 1 1 1 1 43.816 43.865 2 0.003453 11577 20230619_1881_Aki_TMTPro18x_K_F2 154.91 28.845 1699900 1126900 1225300 1525400 1356900 1852200 1540400 1626100 2332300 1496700 1361500 1501000 1826300 1394800 1073700 2263200 2107800 1816500 1566400 1035800 1288500 1511100 1409600 1841500 1566000 1673100 2290500 1521900 1462700 1521600 1814200 1488300 1168600 2231500 2004700 1731100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1688299999.9999998 28824 3734 27079 54170;54171;54172;54173 43713;43714 43713 2 9606 Homo sapiens 0.08262469251042148 VGLIGSCTNSSYEDMGR Unmodified 1844.8033 0.80329739 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;A0A7I2V614;B4DEC3;Q71UF1;B4DW08;A0A7I2V538;O75944 ACO2;ACON Aconitate hydratase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 52.254 52.329 2 1.5652999999999998E-38 14915 20230619_1886_Aki_TMTPro18x_K_F6 264.72 252.45 37278 32784 40421 44773 35546 49802 47240 48739 51609 57956 56849 65284 63545 59349 58234 66300 68773 77629 34510 30103 40772 44285 37694 49916 47101 50107 52572 58290 58436 65713 64434 61776 59938 67123 65760 73580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59687000 28825 1050 27080 54174;54175 43715;43716 43716 2 9606 Homo sapiens -0.08531212949856126 VGLNAQAACAPR Unmodified 1226.619 0.6189895 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 0 1 0 1 40.223 40.223 2 1.6677E-17 10187 20230619_1880_Aki_TMTPro18x_K_F1 229.55 195.36 93160 74034 68953 79261 100030 118970 140700 138180 182000 81126 66189 54823 86478 54338 80960 104250 87599 46696 85941 67842 72657 80184 102700 117690 140570 138220 178140 84424 74187 57009 87300 58722 82903 100670 83467 45112 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100730000 28826 2830 27081 54176 43717 43717 1 9606 Homo sapiens 0.01474476263069846 VGLPLLSPEFLLTGVLK Unmodified 1795.0859 0.085908466 1308 Q14676-2;A0A1U9XBE0;A0A1U9XBF2;A0A1U9XBE3;A0A1U9XBE1;A0A1U9XBD4;A0A1U9XBC2;A0A1U9XBC1;A0A1U9XBC0;A0A1U9XBB2;Q14676;A0A1U9XBD9;A0A1U9XBC3;Q14676-3;B4DYH4;Q14676-4 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 0 0 0 5.5 0.5 1 1 68.094 68.138 3 5.0172E-07 21397 20230619_1885_Aki_TMTPro18x_K_F5 118.52 105.39 7063.1 4997.5 6951.8 6811.6 4289.9 6315.3 6577.6 6063.5 6383.7 6482.9 5024.3 7118.3 5618 6561.9 8076.1 6097.5 5717.9 6387.8 6524.7 4592.6 7032 6723.5 4738.8 6413 6495.8 6227.5 6463.7 6548.7 5266.7 7167.7 5842.3 6754.2 8028.2 6159.3 5498.3 6061.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14576000 28827 1308 27082 54177;54178 43718 43718 1 9606 Homo sapiens 0.22016894850526114 VGLPPLEK Unmodified 851.51165 0.5116541 3658 P55084-2;P55084;B4DY96;B5MD38;F5GZQ3;B4DDC9 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 7.33 0.471 2 1 53.888 53.957 2;3 0.020074 15233 20230619_1888_Aki_TMTPro18x_K_F8 98.523 31.491 296790 244730 281370 307700 370020 411210 432210 401940 442490 412060 428760 438520 452940 374760 414290 495380 287390 497840 274330 224570 288710 306910 378930 407690 432260 411480 449620 416730 441720 441970 459390 395110 415520 495750 277660 472050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1190700000 28828 3658 27083 54179;54180;54181 43719;43720 43720 2 9606 Homo sapiens 0.07995874391190227 VGLQAQPMHSELVK Unmodified 1535.813 0.81299786 1573 A0A5F9ZHM6;A0A5F9ZI15;A0A5F9ZHN0;A0A5F9ZH03;A0A5F9ZHE2;A0A5F9ZHR2;A0A5F9ZHL9;A0A5F9ZHJ4;A0A5F9ZI08;A0A5F9ZH39;A0A5F9ZI69;A0A5F9ZHJ6;A0A5F9ZHL3;A0A5F9ZGS5;A0A5F9ZHL5;A0A5F9ZH17;A0A5F9ZI18;A0A5F9ZI56;A0A5F9ZGY1;A0A5F9ZHG3;A0A5F9ZHQ5;A0A994J7V8;A0A5F9ZHC9;A0A5F9ZI81;A0A5F9ZH70;A0A5F9ZGZ1;A0A5F9ZHQ3;A0A5F9ZI36;A0A5F9ZHA1;A0A5F9ZH58;A0A5F9ZI73;A0A5F9ZHY6;A0A5F9ZGS7;A0A5F9ZH34;A0A5F9ZH10;A0A5F9ZH35;E9PCH6;A0A5F9ZI16;A0A5F9ZH99;A0A5F9ZH18;A0A5F9ZGX8;B7Z2H4;A0A5F9ZI53;A0A5F9ZH38;Q01484-5;Q01484-2;A0A5F9ZI45;A0A5F9ZI46;A0A5F9ZH30;B7Z636;A0A5F9ZGZ5;A0A5F9ZI65;A0A5F9ZHT8;A0A5F9ZGY3;A0A5F9ZH19;A0A5F9ZHN5;A0A5F9ZI40;A0A5F9ZHT4;I6L894;A0A5F9ZHD2;A0A5F9ZI41;A0A5K1VW73;A0A5F9ZHF7;A0A5F9ZHE4;B7Z678;Q7Z344;H0Y931;A0A5F9ZHV4;E9PHW9;A0A5F9ZGY4;Q01484;H0Y8Y2;A0A5F9ZHS1;D6RHE1;A0A5F9ZGX3;H0Y933;A0A5F9ZI30;A0A5F9ZHR8;A0A0U1RQN6;A0A669KB19 ANK2;DKFZp686M09125 Ankyrin-2 yes no 0 0 0 8 0 1 47.152 47.201 3 0.01534 12399 20230619_1888_Aki_TMTPro18x_K_F8 52.5 38.081 56746 48943 62644 66375 52031 70657 64714 55556 69650 64953 76582 79996 77202 65442 70398 87177 74985 96482 52534 44940 63026 65628 55310 70737 64675 58109 70918 65620 78298 80062 78447 69140 72062 87715 71850 91462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55199000 28829 1573 27084 54182 43721 43721 1 9606 Homo sapiens 0.06652387908502533 VGLQVVAVK Unmodified 911.5804 0.58040237 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6;A0A7I2V5M1;B7Z532 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 3 0.816 1 1 1 53.587 53.64 2;3 0.00014372 16017 20230619_1881_Aki_TMTPro18x_K_F2 113.71 85.538 707490 521330 671120 664050 648070 724690 699830 1079000 863280 761830 824450 713940 811580 633560 707520 1000700 759380 899630 653510 478660 684360 660230 676770 736030 708780 1067800 868330 784890 846250 725640 823430 675780 725880 993050 727040 855030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18864000000 28830 272 27085 54183;54184;54185 43722;43723;43724 43722 3 9606 Homo sapiens 0.1210753869089558 VGLTNYAAAYCTGLLLAR Unmodified 1926.0033 0.003317824 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9;A0A2R8Y4A2;Q5T7N0 RPL5 60S ribosomal protein L5 yes no 0 0 0 6.5 0.5 1 1 63.134 63.182 3 3.6311E-30 19530 20230619_1886_Aki_TMTPro18x_K_F6 218.83 201.08 147080 130400 140200 133340 134780 158080 158590 163130 150410 143300 107300 120610 144080 109440 119780 173240 169480 140570 136020 119400 142890 134860 141100 158120 158300 165720 152100 145180 113840 123150 144730 116670 125250 171060 161470 133960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1138200000 28831 1916 27086 54186;54187 43725;43726 43725 2 9606 Homo sapiens 0.07735629780108866 VGMGGMEAK 2 Oxidation (M) 910.38884 0.38883813 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 2 0 4 0 1 34.34 34.39 3 0.015104 7290 20230619_1883_Aki_TMTPro18x_K_F4 63.419 49.649 27899 13095 31771 32885 41112 37108 35477 37516 34423 30304 40304 42110 34720 34556 39601 19808 39531 38773 25758 12173 32088 31604 41727 37193 36083 38106 35343 31367 40858 41919 35871 35114 40066 21276 37818 36628 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23074000 28832 3654 27087 54188 43727 43727 2351;2352 1 9606 Homo sapiens -0.06994073394048428 VGMIPVPYVEK Oxidation (M) 1246.6631 0.66314572 3590 P46109 CRKL Crk-like protein yes yes 0 1 0 1 0 1 57.796 57.796 3 0.023434 17599 20230619_1880_Aki_TMTPro18x_K_F1 53.569 38.596 49613 41037 48980 52862 58126 61647 50811 53599 60524 71929 74270 70200 71506 64617 77971 77445 104350 96843 45874 37665 49959 52516 59452 61495 51988 55789 61721 71649 75425 71168 73432 67543 80618 78696 99535 91804 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112840000 28833 3590 27088 54189 43728 43728 2259 1 9606 Homo sapiens 0.04968067636696105 VGMVETNSQDRPVDDVK Oxidation (M) 1903.8946 0.89455524 737 A0A024RCX8;Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase-like 1 yes no 0 1 1 3 0 1 41.511 41.573 3 4.3874E-05 10258 20230619_1882_Aki_TMTPro18x_K_F3 95.692 81.716 82771 64702 70205 91050 98293 92862 95752 90718 99768 91398 103560 99467 103040 83376 103040 112200 99881 107500 76418 59457 72897 89756 99702 93736 96790 92879 101550 92585 106040 100130 105140 88066 104660 112000 95649 102130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118610000 28834 737 27089 54190 43729 43729 446 1 9606 Homo sapiens -0.021236259808574687 VGMVETNSQDRPVDDVK Unmodified 1887.8996 0.89964061 737 A0A024RCX8;Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase-like 1 yes no 0 0 1 4 0 1 44.892 44.936 3 2.8367E-06 11694 20230619_1883_Aki_TMTPro18x_K_F4 109.5 93.679 137290 106030 125270 143280 140660 180810 174530 164250 185190 176570 185590 208130 202020 175570 184960 193420 211630 220900 126810 97394 128660 142070 146000 179500 174280 169290 188060 178760 191290 208670 204900 183130 189890 195610 202300 209490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105230000 28835 737 27089 54191 43730 43730 1 9606 Homo sapiens -0.008793221182486377 VGNEVATGTGPNKK Unmodified 1370.7154 0.7153923 478 Q9NUL3;Q4LE57;Q9NUL3-2;Q9NUL3-4;Q9NUL3-7;Q9NUL3-3;Q9NUL3-6;Q9NUL3-8;A0A024R7X7;Q2TBD5;E7EVJ4;E7EPX0;A8K276;E5RJN7;B7Z1P6;E7EVI1;E5RJ67 STAU2;STAU2 variant protein Double-stranded RNA-binding protein Staufen homolog 2 yes no 0 0 1 8 0 1 39.324 39.311 3 4.918E-05 9188 20230619_1888_Aki_TMTPro18x_K_F8 103.14 80.939 30505 17399 33164 35722 40960 46353 31895 39089 35876 30944 49003 49586 40047 39472 48426 23213 46676 38876 28174 16096 33596 34667 41694 45858 32852 40206 36807 32280 49287 49121 41577 40173 48853 24560 44622 36787 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19047000 28836 478 27090 54192 43731 43731 1 9606 Homo sapiens 0.044863223040238154 VGNIEIK Unmodified 771.44905 0.44905385 3690 P61160;P61160-2;A0A1B0GWD0;A0A1B0GWH0 ACTR2 Actin-related protein 2 yes no 0 0 0 6.5 0.5 1 1 48.917 48.999 2 0.017544 13132 20230619_1887_Aki_TMTPro18x_K_F7 108.46 41.429 725600 508030 658180 693400 880340 918270 832250 841770 1065100 958580 1051900 1092500 1056100 874290 923860 1057200 1048400 980870 669820 466900 677730 687800 895650 909700 848990 868120 1071200 966800 1080200 1095500 1071300 918570 949360 1054900 1001400 932690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 869790000 28837 3690 27091 54193;54194 43732 43732 1 9606 Homo sapiens 0.05418728323002142 VGNLGLATSFFNER Unmodified 1523.7732 0.77324153 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;Q5S4N1;A0A0J9YVQ7;A0A087WVZ1 DDX3X ATP-dependent RNA helicase DDX3X yes no 0 0 0 2.5 0.5 1 1 62.645 62.664 3 2.9523E-07 19522 20230619_1882_Aki_TMTPro18x_K_F3 139.86 117.98 134030 107520 132680 140220 115560 140930 142140 143990 159330 149070 122960 130350 146010 131800 142600 145980 146450 135160 123910 98714 134700 138930 122210 142480 142320 147030 159950 149840 128970 133180 148200 136630 145280 145880 140010 128540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 362400000 28838 1018 27092 54195;54196 43733;43734 43734 2 9606 Homo sapiens 0.03230584229481792 VGNPWDPNVLYGPLHTK Unmodified 1905.9737 0.97373226 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GW82;A0A1B0GUA1;A0A1B0GTJ4;A0A1B0GV49 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 2 0 1 60.735 60.746 3 1.8978E-18 18909 20230619_1881_Aki_TMTPro18x_K_F2 179.1 162.74 50386 44632 46646 48713 47797 53868 59667 54298 56842 50896 59854 64882 66855 56740 60687 64039 64840 68557 46586 40890 47736 48950 49869 54102 59376 55373 58161 52050 61620 64964 67716 59180 62067 64484 62024 65054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75909000 28839 1415 27093 54197 43735 43735 1 9606 Homo sapiens 0.056984338262736856 VGNTPETR Unmodified 872.43519 0.4351947 4720 Q9Y3B4 SF3B6 Splicing factor 3B subunit 6 yes yes 0 0 0 2.5 0.5 1 1 29.914 29.995 2 0.027538 5595 20230619_1882_Aki_TMTPro18x_K_F3 82.279 66.125 19269 9648 23342 25188 35647 34351 28238 34861 24396 14247 28940 34582 19912 21838 26870 9197.7 33183 32411 17806 8972.1 23563 24249 35788 34024 28806 35013 25199 16114 29138 33721 20976 22275 27448 10804 31683 30541 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18432000 28840 4720 27094 54198;54199 43736 43736 1 9606 Homo sapiens -0.006125491760940349 VGPDTER Unmodified 772.37153 0.37153181 134 A0A024R1A3;P22314-2;P22314;B4DDE4;B4DL67 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 1 0 1 30.733 30.733 2 0.0069015 6267 20230619_1880_Aki_TMTPro18x_K_F1 129.39 66.105 50720 20488 61726 65605 100440 87586 67953 95868 60841 43666 92939 114330 65724 72513 93835 23506 98877 93082 46836 19170 62355 62750 100150 87030 70292 95907 63547 49017 92856 111300 69372 73556 94798 28547 94516 87693 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47579000 28841 134 27095 54200 43737 43737 1 9606 Homo sapiens -0.023759096131925617 VGPGAGESPGTPPFR Unmodified 1424.7048 0.70482762 2710 Q8TEQ6;B7ZLC9;Q58EZ8 GEMIN5 Gem-associated protein 5 yes no 0 0 0 6 0 1 45.837 45.923 2 1.1982E-08 12085 20230619_1886_Aki_TMTPro18x_K_F6 139.76 114.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28842 2710 27096 54201 43738 43738 1 9606 Homo sapiens 0.009463396496130372 VGPGVCR Unmodified 743.37484 0.37484305 2945 E9PS41;Q6RFH5;Q6RFH5-2;B4E018 WDR74 WD repeat-containing protein 74 yes no 0 0 0 7.5 0.5 1 1 32.957 33 2 0.06842 6500 20230619_1887_Aki_TMTPro18x_K_F7 77.906 62.685 55784 29853 64987 64108 82016 82936 68446 78132 82815 57237 74733 82454 71729 59559 72356 46073 83634 69388 51541 27648 65487 62117 83414 82272 70277 79566 83147 59757 76986 81725 73332 61500 74029 47919 79813 65710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27415000 28843 2945 27097 54202;54203 43739 43739 1 9606 Homo sapiens -0.007109380401743692 VGPQYQAVVPDFDPAK Unmodified 1729.8675 0.86753585 4677 Q9UKL0 RCOR1 REST corepressor 1 yes yes 0 0 0 6.5 0.5 1 1 60.221 60.273 3 0.00020893 17910 20230619_1887_Aki_TMTPro18x_K_F7 89.541 72.856 52537 36527 47601 50148 40288 53686 42617 40230 52888 57798 56483 63467 66375 52400 51616 67991 58293 72386 48496 33573 48672 49549 42594 53684 43177 42524 53486 57650 58246 63775 66699 55266 53211 68266 55807 68654 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 175440000 28844 4677 27098 54204;54205 43740 43740 1 9606 Homo sapiens 0.031796782609262664 VGPSSGDAPEPSSR Unmodified 1341.6161 0.61607219 616 A0A024RAC0;Q86V48-2;Q86V48-3;Q86V48 LUZP1 Leucine zipper protein 1 yes no 0 0 0 2 0 1 34.818 34.875 2 1.5261E-05 7638 20230619_1881_Aki_TMTPro18x_K_F2 148.28 123.43 7982 6717.7 7552.1 6257.5 9811.9 9223.1 10511 9547.5 14907 12356 13294 11848 13851 8843.1 10054 10375 13208 9368.6 7378.8 6147.5 7733.6 6405.6 10027 9117.8 10685 9802.1 14865 12327 13723 11947 13920 9314.5 10464 10346 12580 8923.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8926400 28845 616 27099 54206 43741 43741 1 9606 Homo sapiens -0.041071203807405254 VGQAMASTEEK Oxidation (M) 1165.5285 0.52850274 247 A0A024R3J7;P46977;P46977-2 hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 1 0 3 0 1 36.866 36.921 2 0.076385 8375 20230619_1882_Aki_TMTPro18x_K_F3 55.064 44.354 7044.1 4818 9308.1 9428.3 11645 12475 8770 11012 11130 9290.1 13103 15225 9868.3 10237 14293 9391.3 14581 15339 6524.2 4449.6 9300.9 9173.8 11829 12342 9093.3 11300 11274 9660.7 13231 15007 10397 10675 14445 9799.5 13954 14503 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7527500 28846 247 27100 54207 43742 43742 147 1 9606 Homo sapiens -0.047640375758419395 VGQAMASTEEK Unmodified 1149.5336 0.53358811 247 A0A024R3J7;P46977;P46977-2 hCG_2032701;STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A yes no 0 0 0 3.5 0.5 1 1 42.883 42.938 3 0.026183 10852 20230619_1883_Aki_TMTPro18x_K_F4 56.551 36.764 56935 50526 62715 60019 72482 87148 73289 78170 101270 67242 67763 79865 83548 67393 65684 72814 78059 83743 52719 46325 63372 60200 74625 85834 74695 80150 100170 68999 71855 80046 83919 70242 67827 73679 74606 79403 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254930000 28847 247 27100 54208;54209 43743 43743 1 9606 Homo sapiens -0.035197337132331086 VGQAVDVVGQAGKPK Unmodified 1451.8096 0.80962704 3840 Q59EG8;Q13200;B4DM22;Q13200-3;Q13200-2;Q13041 PSMD2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 1 1.67 0.471 1 2 47.367 47.417 3;4 8.2905E-11 13289 20230619_1881_Aki_TMTPro18x_K_F2 162.41 146.18 425810 319510 345420 398920 428790 466970 447510 431190 546270 524910 602260 582540 612120 510150 472860 666580 642880 549470 392910 293280 359170 397160 439580 466240 453100 445510 553060 527330 615360 586650 617860 536680 493710 660250 612810 523470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 645730000 28848 3840 27101 54210;54211;54212 43744;43745;43746 43746 3 9606 Homo sapiens 0.1017946112615391 VGQDPVLR Unmodified 882.49232 0.49231565 1034 A0A0G2JLD8;E7EUY5;Q567R6;A4D1U3;B7Z268;Q04837;C9K0U8 SSBP1 Single-stranded DNA-binding protein;Single-stranded DNA-binding protein, mitochondrial yes no 0 0 0 4 0.816 1 1 1 40.438 40.501 2 0.0025131 9735 20230619_1883_Aki_TMTPro18x_K_F4 125.53 80.194 185600 119960 138990 112140 175350 585670 149730 125860 1169900 209330 189000 302170 241430 253810 173820 399200 390460 302000 171040 109900 145920 119690 184200 544660 182650 162340 1091600 212920 242500 300820 242730 270590 191110 392680 370890 288200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 832400000 28849 1034 27102 54213;54214;54215 43747 43747 1 9606 Homo sapiens 0.0463691810026603 VGQEIEVRPGIVSK Unmodified 1509.8515 0.85149185 3571 P41091 EIF2S3 Eukaryotic translation initiation factor 2 subunit 3 yes yes 0 0 1 7.5 0.5 1 1 48.093 48.166 3 5.0179E-05 12746 20230619_1887_Aki_TMTPro18x_K_F7 105.53 91.269 1091900 843510 977750 1089900 1020700 1169300 1172400 1073300 1279200 1438900 1419800 1449300 1530400 1213000 1305100 1762200 1614200 1621000 1008400 774440 1004200 1081200 1061500 1174100 1176500 1113200 1303700 1434700 1455000 1463200 1547400 1288300 1350700 1752600 1541500 1541100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2132199999.9999998 28850 3571 27103 54216;54217 43748 43748 1 9606 Homo sapiens 0.11696016814676113 VGQGYPHDPPK Unmodified 1193.5829 0.58292157 305 A0A024R4T4;P61081;M0QYI6 UBE2M NEDD8-conjugating enzyme Ubc12 yes no 0 0 0 6.5 0.5 1 1 37.53 37.6 3 0.00035381 8537 20230619_1886_Aki_TMTPro18x_K_F6 81.625 63.313 82639 66056 87752 94869 93444 104030 102270 114280 121360 105540 126120 121320 129710 109050 108890 121730 145000 130310 76442 60710 88853 93544 96857 104700 103240 115770 122670 107620 129280 122080 131300 113570 113140 122580 138280 123730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 345250000 28851 305 27104 54218;54219 43749 43749 1 9606 Homo sapiens -0.006126576421138452 VGQHPCCVR Unmodified 1111.5015 0.5015169 1974 I3L3P0;I3L136;A6NHV6;Q0IJ49;B4DZM6;Q99640-4;Q99640-2;Q99640-3;Q99640 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase yes no 0 0 0 8 0 1 27.323 27.353 3 0.00080129 4732 20230619_1888_Aki_TMTPro18x_K_F8 90.657 78.08 6877.6 4029 6414.9 7927.2 7771.8 11052 9440.2 8085 7744.9 5098.9 6015.4 8749.8 8481.8 4539.8 5492.9 4257.5 6110.5 7027 6344.7 3724.1 6589.8 7713.8 8024.3 10855 9363.1 8391.3 7909.8 5426.5 6378.9 8561.3 8417.5 4820.3 5664.8 4442.3 5846.9 6641.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4224800 28852 1974 27105 54220 43750 43750 1 9606 Homo sapiens -0.04977379877345811 VGQSEIR Unmodified 787.41882 0.41881635 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H962;B4DGF6 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 3 0 1 33.076 33.148 2 0.043748 6803 20230619_1882_Aki_TMTPro18x_K_F3 89.046 41.979 30751 19128 35872 39137 50872 52842 35646 48949 43508 34657 53150 64420 47364 46949 50044 24005 65893 63956 28431 17686 36247 38018 51221 52268 37119 49862 44224 36692 53907 63373 48705 47802 51563 26817 62879 60329 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14346000 28853 594 27106 54221 43751 43751 1 9606 Homo sapiens 0.016603696578044946 VGQTIER Unmodified 801.43447 0.43446642 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9;Q6P2D7;M0R2I7 HNRNPM;ORF;HNRPM Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 3 0.816 1 1 1 34.062 34.121 2 0.0063025 7164 20230619_1883_Aki_TMTPro18x_K_F4 134.08 48.271 395380 204670 488050 518100 774620 812180 567000 732070 639120 414230 670010 788560 556800 569870 651500 253190 755520 703640 365470 190170 492480 500600 775840 796400 586410 744370 647320 447180 682030 775250 577060 578270 664250 286150 721510 663740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 512040000 28854 3194;3631 27107 54222;54223;54224 43752;43753 43753 2 9606 Homo sapiens 0.025806561748481727 VGRPIVEALR Unmodified 1108.6717 0.671677 3106 Q9HC39;Q9HBB9;I3L2C7;Q8WUM5;P57678;I3L4A4;I3L399;I3L1J7;E7EN12;B4DZ29;I3L4M4 GEMIN4 Gem-associated protein 4 yes no 0 0 1 3 0 1 42.979 43.045 3 0.0053952 10956 20230619_1882_Aki_TMTPro18x_K_F3 72.434 30.558 53741 41075 54948 54911 59578 65856 56850 55207 76552 59952 58345 56392 73793 48505 49922 58056 60275 64998 49682 37727 55783 54449 61476 65512 58082 57265 76131 60275 61348 57140 73602 50886 51798 58549 57604 61644 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69320000 28855 3106 27108 54225 43754 43754 1 9606 Homo sapiens 0.1216880238819158 VGRPSNIGQAQPIIDQLAEEAR Unmodified 2361.2401 0.24007071 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8;A0A0J9YVR6;A0A0J9YWM1;E9PN18;E9PMU7 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 0 1 6.5 0.5 1 1 56.599 56.664 3 3.5546E-17 16375 20230619_1887_Aki_TMTPro18x_K_F7 161.51 137.95 69693 63607 68853 72271 69241 78391 78909 77637 84876 88320 88824 89876 96019 78718 76498 102980 104860 100750 64484 58289 70047 72377 72161 78801 79198 79654 86323 88723 91253 90813 96850 82864 79841 102890 100030 95729 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 787960000 28856 1044 27109 54226;54227 43755;43756 43755 2 9606 Homo sapiens 0.11390027807374281 VGRPTASK Unmodified 814.4661 0.4661009 4497 Q9H1E3;Q9H1E3-2 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes no 0 0 1 2.5 0.5 1 1 31.07 31.145 3 0.012055 6038 20230619_1882_Aki_TMTPro18x_K_F3 80.219 44.725 221190 91099 346740 348230 561610 455330 380740 540630 346170 150140 349520 379810 176810 233490 429820 87675 352700 248770 204860 85652 344800 331530 559690 453970 393810 535510 353870 179510 351580 370120 198450 237600 426400 100660 337490 234960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100080000 28857 4497 27110 54228;54229 43757 43757 1 9606 Homo sapiens 0.051446489288082375 VGSAADIPINISETDLSLLTATVVPPSGR Unmodified 2892.5444 0.54441738 3484 P21333;P21333-2;Q60FE5;Q60FE6;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5F3;H7C2E7 FLNA;FLJ00119 Filamin-A yes no 0 0 0 8 0 1 66.352 66.371 3 8.188399999999999E-21 20491 20230619_1888_Aki_TMTPro18x_K_F8 150.11 138.26 4489.2 3940.4 5044 4434.5 5467.5 5136.8 7084.9 5310.9 5723.6 5388.9 5851.5 6381.6 5107.1 4743.7 7468.8 6524.8 7006.8 7023.5 4157.2 3611.1 5081.3 4450.4 5674.6 5148.6 7002.9 5420.5 5910.7 5471.1 5975.5 6378.1 5351.3 5039.6 7522.6 6558.8 6708.6 6665.6 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 16260000 28858 3484 27111 54230 43758;43759 43759 2 9606 Homo sapiens 0.17384694930387923 VGSEIER Unmodified 788.40283 0.40283194 3631;3194 M0QZM1;P52272-2;P52272;A0A087X0X3;Q59ES8;Q7KYM9 HNRNPM;ORF Heterogeneous nuclear ribonucleoprotein M no no 0 0 0 2 0.816 1 1 1 35.133 35.171 2 0.0055321 8035 20230619_1880_Aki_TMTPro18x_K_F1 140.12 63.271 269890 131230 345460 344190 530680 552510 382600 483100 423580 269020 450650 510680 396120 377520 430100 170500 503390 457580 249510 122070 347350 332360 532160 540820 395950 492260 429660 290840 459210 502470 407910 382940 439280 191650 480620 431740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 715890000 28859 3194;3631 27112 54231;54232;54233 43760;43761 43760 2 9606 Homo sapiens 0.00016663420910845161 VGSFSQNVELLNLLPK Unmodified 1756.9723 0.97233527 1070 D3DXD9;D3DXD8;A0A0S2Z3H1;P42575-2;P42575;C9JRR9;A0A087WYM1;P42575-3 hCG_20684;CASP2 Caspase;Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 yes no 0 0 0 3 0 1 64.506 64.538 3 4.2657E-06 20362 20230619_1882_Aki_TMTPro18x_K_F3 113.59 96.184 13961 12105 16067 16756 11041 15519 16899 16476 16955 17721 17168 20445 19792 16585 18825 20609 21305 19982 12930 11117 16081 16522 12039 15797 16708 16806 17283 17919 17746 20491 20072 17446 19305 20607 20351 18991 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19914000 28860 1070 27113 54234 43762 43762 1 9606 Homo sapiens 0.12412799737535352 VGSGTYGDVYK Unmodified 1144.5401 0.5400537 1728 B2R928;A0A804HIS2;Q9Y4K4;D3DSB5;G3V4T8;G3V4Q4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 5 yes no 0 0 0 7 0 1 46.828 46.916 2 0.00029464 12150 20230619_1887_Aki_TMTPro18x_K_F7 127.3 84.274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28861 1728 27114 54235 43763 43763 1 9606 Homo sapiens -0.026434724901946538 VGSHEQPSGATLQR Unmodified 1465.7274 0.72735397 4146 Q765P7 MTSS1L MTSS1-like protein yes yes 0 0 0 5 0 1 31.651 31.731 3 1.0699E-08 6287 20230619_1885_Aki_TMTPro18x_K_F5 153.39 140.62 5885.9 4098.4 4844.6 5017.3 4674.7 5918 6488.2 4714.2 5776.1 4869.4 8995.7 9447.8 5752.6 5910.7 6970 5658.7 6908.6 6257.7 5429.5 3762.4 5008.5 5002.8 4923 5886.7 6412.6 4912.2 6037.3 5052.2 8941 9261.1 6036.3 6191.3 7055.6 5730.4 6606.1 5939.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13053000 28862 4146 27115 54236 43764 43764 1 9606 Homo sapiens 0.013119390472411396 VGSIPANAADDGQWSQGLISAAR Unmodified 2283.1244 0.12437225 4740 Q9Y4G6;A0A1B0GVU7;G1UI21;H0YMT1 TLN2 Talin-2 yes no 0 0 0 7 0 1 60.476 60.519 3 1.5321E-16 18026 20230619_1887_Aki_TMTPro18x_K_F7 145.65 137.94 30722 27214 30717 32846 27224 40409 37970 34283 44738 29644 30181 33725 31160 27233 36714 35989 33071 39394 28422 24956 31184 32803 28929 40118 37849 35336 44557 30365 31736 33836 32045 28768 37033 36215 31721 37357 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19985000 28863 4740 27116 54237 43765 43765 1 9606 Homo sapiens 0.03413503956471686 VGSLDNAHHVPGGGNVK Unmodified 1656.8332 0.83321603 275;1599 A0A024R3Z1;A0A024R3Y8;P11137-4;Q16296;A0A669KB77;P11137-3;P11137;A8K5Y1;A0A024R409;Q59FX9;P11137-2 MAP2;4R-MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 0 7.5 0.5 1 1 38.214 38.239 4 3.0097E-13 8541 20230619_1887_Aki_TMTPro18x_K_F7 151.44 124.41 98756 73402 106800 107820 130000 127200 132760 148170 112470 118840 144630 165300 133810 129520 145170 117810 164110 155820 91326 67499 108170 106310 133030 127620 133150 149080 117020 122980 146600 164390 137560 134120 148300 120810 156780 147630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239220000 28864 275;1599 27117 54238;54239 43766 43766 1 9606 Homo sapiens 0.031072748926590066 VGSLNCIVAVSQNMGIGK Oxidation (M) 1861.939 0.93900301 2183 B0YJ76;P00374;B4DM58 DYR;DHFR Dihydrofolate reductase yes no 0 1 0 4 0 1 59.957 59.959 3 3.2892E-05 18334 20230619_1883_Aki_TMTPro18x_K_F4 93.342 76.598 29282 25852 30459 27396 28030 36197 37293 31208 36082 30761 30283 26423 33139 25865 31173 27648 26297 29200 27099 23678 30801 27673 29580 35815 37011 32224 36581 30998 31451 27011 33614 26814 31446 27856 25228 27707 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17863000 28865 2183 27118 54240 43767 43767 1356 1 9606 Homo sapiens 0.04251106631613766 VGSTSENITQK Unmodified 1162.583 0.58298115 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;Q5S4N1;B4E132 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 5.5 0.5 1 1 41.306 41.396 3 0.000288 10122 20230619_1886_Aki_TMTPro18x_K_F6 103.69 68.97 108310 63048 114990 126380 158420 162050 130930 139430 165380 132650 170300 168530 163940 144420 153380 143030 168380 151720 100020 58296 116950 122750 160310 160550 134700 143800 166610 135590 174190 168650 167050 149660 156910 144310 160850 144070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 210540000 28866 1018 27119 54241;54242 43768;43769 43769 2 9606 Homo sapiens 0.00819297567227295 VGSVLQEGCGK Unmodified 1132.5547 0.55465791 21 A0A024QZ30;P31040;P31040-2;B3KT34;Q0QF12;P31040-3;B3KYA5 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 6.5 0.5 1 1 47.681 47.766 2 4.9437E-12 12561 20230619_1887_Aki_TMTPro18x_K_F7 206.49 156.64 130270 100840 127300 150660 169200 181440 168960 159010 191950 183350 188540 191270 196840 164000 148120 216700 210240 207220 120400 92733 130340 148350 172400 180580 171020 164660 194140 184270 193920 192930 198360 172860 155290 216170 200530 196930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118080000 28867 21 27120 54243;54244 43770;43771 43771 2 9606 Homo sapiens -0.0063172361371925945 VGTAQLALVAR Unmodified 1097.6557 0.65569258 2898;4664 E7ERK9;Q9UI10;Q9Y3W7;Q9UI10-3;Q9UI10-2;Q71US4 EIF2B4;DKFZp586J0119 Translation initiation factor eIF-2B subunit delta no no 0 0 0 4 0 1 51.176 51.203 2 0.0056861 14532 20230619_1883_Aki_TMTPro18x_K_F4 86.879 58.367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28868 2898;4664 27121 54245 43772 43772 1 9606 Homo sapiens 0.11077096151302612 VGTFFSEVKPAGPTVEQQGEMAR Unmodified 2464.2057 0.20565904 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 1 8 0 1 57.272 57.323 4 8.654799999999999E-19 16707 20230619_1888_Aki_TMTPro18x_K_F8 145.73 134.48 38910 34595 43500 37951 34515 43734 45714 41884 56050 33500 30814 32124 35391 30233 39998 36250 34852 34274 36034 31695 43649 38156 36906 43736 45748 42703 55439 34314 33031 32619 36203 31565 40286 36236 33392 32577 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65363000 28869 3654 27122 54246 43773 43773 1 9606 Homo sapiens 0.03212443604206783 VGTGEPCCDWVGDEGAGHFVK Unmodified 2275.9627 0.96265158 3630 P52209-2;P52209;B4E2U0;B4DL86;K7EM49;K7EPF6 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 4 0.816 1 1 1 53.023 53.074 3 1.6254E-23 15339 20230619_1883_Aki_TMTPro18x_K_F4 191.95 173.42 160470 138020 157080 153540 172250 214240 191110 191800 204490 213080 189550 195950 232000 181990 184570 252940 214710 244570 148410 126480 160100 154630 178410 211480 192010 197970 207150 213680 197060 199290 233110 192030 190570 252340 205340 232280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 939260000 28870 3630 27123 54247;54248;54249 43774;43775 43774 2 9606 Homo sapiens -0.12429124392565427 VGTLDVLVGLSDELAK Unmodified 1627.9033 0.90325265 575 A0A024R9I0;P21283 ATP6V1C1 V-type proton ATPase subunit C 1 yes no 0 0 0 7 0 1 65.904 65.929 3 3.4997999999999996E-19 20475 20230619_1887_Aki_TMTPro18x_K_F7 197.14 166.94 42504 31009 35658 41745 28709 33785 33376 39270 34702 47491 46866 49544 57202 48268 43588 58186 52516 59376 39223 28489 36720 41168 30528 34886 33469 39957 35827 47586 47972 50166 57402 50362 45138 58334 50208 56358 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118130000 28871 575 27124 54250 43776 43776 1 9606 Homo sapiens 0.11441715717978695 VGTLVGEDK Unmodified 916.48656 0.48656157 4003 Q53HG1;Q9UI09;A0A804HJF8;A0A804HK60;F8VRD8;A0A804HHX9;H0YID5;Q9UI09-2;H0YIT1 NDUFA12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes no 0 0 0 4.5 0.5 1 1 48.427 48.485 2 0.00083766 13130 20230619_1885_Aki_TMTPro18x_K_F5 135.71 96.749 108500 98940 129280 135670 155280 177990 163860 159270 179470 142180 161100 157550 168720 140620 129110 157460 177250 166420 100560 90842 130060 134500 159450 176270 165160 163540 181100 145160 166420 158730 170100 146520 134790 158390 169050 158010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 101990000 28872 4003 27125 54251;54252 43777;43778 43778 2 9606 Homo sapiens 0.024977747979505693 VGTSFSIPVVSDVR Unmodified 1461.7827 0.78274359 4312 Q92979;A8K6D2;V9GYP5;B4DQC7;A0A087WWQ2 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes no 0 0 0 1.5 0.5 1 1 60.578 60.583 2 6.6574E-16 18752 20230619_1880_Aki_TMTPro18x_K_F1 247.3 205.88 154510 120360 133240 146790 130770 151760 145120 142530 158060 163200 143220 136270 183030 134300 150180 193050 164080 174930 142670 110440 137170 146140 136530 152870 145910 146810 159840 163020 149330 139600 183850 141810 154300 191890 156930 166310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135850000 28873 4312 27126 54253;54254 43779;43780 43779 2 9606 Homo sapiens 0.07032352514988816 VGTVIGSNK Unmodified 873.49198 0.4919813 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 2 0 1 45.003 45.086 2 7.2594E-16 12171 20230619_1881_Aki_TMTPro18x_K_F2 188.98 88.226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28874 261 27127 54255 43781 43781 1 9606 Homo sapiens 0.050174983804254225 VGTVIGSNKLEQMPSK Unmodified 1686.8975 0.89745577 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 1 3 0 1 52.76 52.819 4 2.5503E-05 15418 20230619_1882_Aki_TMTPro18x_K_F3 102.1 85.164 172990 145600 155540 159700 127220 160800 178070 175540 223100 170630 192190 200300 232980 184670 191990 251000 222590 236390 159850 133420 159100 160230 136010 162850 177980 178220 223300 173710 200450 201630 234490 194530 197970 250160 212770 224630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56633000 28875 261 27128 54256 43782 43782 1 9606 Homo sapiens 0.08148293934618778 VGTYQLAIVAK Unmodified 1161.6758 0.67575932 4447 Q9BV20;Q9BV20-2 MRI1 Methylthioribose-1-phosphate isomerase yes no 0 0 0 3 0 1 57.449 57.482 3 0.00045534 17386 20230619_1882_Aki_TMTPro18x_K_F3 106.62 84.471 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28876 4447 27129 54257 43783 43783 1 9606 Homo sapiens 0.10138847091252501 VGVASSEELAR Unmodified 1116.5775 0.57750184 3359 O95721 SNAP29 Synaptosomal-associated protein 29 yes yes 0 0 0 3 0 1 41.741 41.804 2 0.020032 10364 20230619_1882_Aki_TMTPro18x_K_F3 86.898 69.658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28877 3359 27130 54258 43784 43784 1 9606 Homo sapiens 0.023876187754240163 VGVDYEGGGCR Unmodified 1167.4979 0.49787131 2219 B4DGN8;B2R5M9;Q02809;Q02809-2;B4DHT1 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes no 0 0 0 2.5 0.5 1 1 39.305 39.365 2 3.828E-23 9336 20230619_1882_Aki_TMTPro18x_K_F3 258.47 250.82 169860 125730 145720 173760 230000 234300 218540 218210 260120 237170 239100 282150 263160 219570 234220 277590 312620 293570 156780 115540 151480 172230 231870 231960 222190 224490 261850 240070 247640 282150 266520 231630 243230 278790 298230 278740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 201850000 28878 2219 27131 54259;54260 43785;43786;43787 43786 3 9606 Homo sapiens -0.07917771170218657 VGVGHAGEWAR Unmodified 1137.5679 0.56794021 3521 Q1W6H1;P29372-5;P29372-4;P29372-2;P29372 MPG DNA-3-methyladenine glycosylase yes no 0 0 0 6.5 0.5 1 1 37.401 37.468 3 0.0012768 8523 20230619_1886_Aki_TMTPro18x_K_F6 88.155 69.483 89643 60709 84622 86909 96199 105330 95009 96096 120260 83621 102610 103220 102230 86646 102320 74234 115820 99362 82763 55832 86564 85832 99020 104870 96642 98480 120240 85850 106100 103310 104360 89297 104620 76311 110570 94168 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41469000 28879 3521 27132 54261;54262 43788 43788 1 9606 Homo sapiens 0.004658952805584704 VGVKPVGSDPDFQPELSGAGSR Unmodified 2198.0968 0.096760517 2268 V9HW51;B2R960;O43396;K7EPB7;K7EKG2 HEL-S-114;TXNL1 Thioredoxin-like protein 1 yes no 0 0 1 6.5 0.5 1 1 51.231 51.308 3 5.6926E-17 14431 20230619_1886_Aki_TMTPro18x_K_F6 156.41 147.59 188070 166360 179420 227130 220980 265170 248190 223610 235270 236630 219770 231540 304170 245810 252250 307320 273520 285430 173920 152750 183960 224720 227060 264190 248160 231740 239990 238370 230030 235890 305230 256390 258890 306450 261580 271290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 651040000 28880 2268 27133 54263;54264 43789;43790 43789 2 9606 Homo sapiens 0.045636006962467945 VGVLTVSDSCFR Unmodified 1338.6602 0.66018561 2679 B7Z4J7;F5H039;B7Z2B5;Q9NQX3;Q9NQX3-2;B2RDJ7;G3V582;G3V4R0;G3V355 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 8 0 2 54.634 54.701 2 0.0028655 15576 20230619_1888_Aki_TMTPro18x_K_F8 121.41 101.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28881 2679 27134 54265;54266 43791;43792 43791 2 9606 Homo sapiens 0.004401925119054795 VGVNGFGR Unmodified 804.42424 0.42423608 3382 V9HVZ4;P04406;Q2TSD0;B4DRV9 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 3.67 3.09 1 1 1 41.875 41.9 2 0.0075015 10909 20230619_1880_Aki_TMTPro18x_K_F1 107.43 91.276 1903500 1693800 2086200 1825800 2179700 2304600 2247200 2127700 2204100 2437600 2636700 2504500 2473700 2023200 2747900 2394500 2706800 2468600 1762500 1551600 2103700 1840700 2256500 2291000 2261400 2194000 2266200 2448300 2677900 2523200 2542000 2123000 2785100 2405800 2588600 2344700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2126799999.9999998 28882 3382 27135 54267;54268;54269 43793;43794;43795 43793 3 9606 Homo sapiens 0.014200932402786748 VGVSQQPEDSQQDLPGER Unmodified 1967.9185 0.9184618 3230 O15031;Q3LIB1;Q2TBE4;A6QRG9 PLXNB2;Nbla00445 Plexin-B2 yes no 0 0 0 1.5 0.5 1 1 43.127 43.167 3 1.1099E-14 11321 20230619_1881_Aki_TMTPro18x_K_F2 168.05 159.04 60313 42641 62246 60820 57132 64531 66246 68314 84185 60019 71935 70099 85104 72362 66338 77132 102250 94368 55737 39207 62988 59978 60023 65034 66830 69307 84170 61465 74926 70834 85596 74849 69819 78363 97429 89478 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 55163000 28883 3230 27136 54270;54271 43796;43797;43798 43798 3 9606 Homo sapiens -0.026780692228385305 VGWEQLLTTIAR Unmodified 1385.7667 0.76669959 387;1069 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;B4DFY0;B3KUX9;A1L0V1;B7Z2W3;H0YJW3;H7C5W8;H0YJ11;Q5ZEZ4;F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3;A0A0S2Z3X3;A0A0S2Z3C0 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 no no 0 0 0 3.5 0.5 2 2 64.724 64.745 2;3 4.4838E-10 20302 20230619_1883_Aki_TMTPro18x_K_F4 185.25 156.97 278020 242240 263850 240580 205560 261680 285320 277910 294820 343440 315320 309150 379660 298290 318020 388510 323050 339530 257070 221760 268240 243650 220530 263440 283440 284490 300920 342440 325330 315120 382310 312900 325150 386030 309160 322940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 682600000 28884 387;1069 27137 54272;54273;54274;54275 43799;43800 43800 2 9606 Homo sapiens 0.08924691068727952 VGWSTMQASLDLGTDK Oxidation (M) 1723.8087 0.80870034 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A087WZ71;Q92499-3;B4DP70;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 1 0 7 0 1 57.736 57.789 3 2.6187E-09 16913 20230619_1887_Aki_TMTPro18x_K_F7 144.18 127.1 47731 37657 44943 50530 44018 46269 53345 52641 52967 52036 54477 59392 59671 52937 55871 64004 55011 62796 44104 34585 45908 49914 46018 47256 53241 53338 54046 52834 56094 59747 60565 55386 56882 64052 52696 59628 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28109000 28885 1661 27138 54276 43801 43801 1082 1 9606 Homo sapiens -0.024251660957133936 VGWVLGPDHIMK Unmodified 1350.7118 0.71182725 1545 A8K563;A0A494C066;B7Z4W5;Q16773-2;Q16773 CCBL1 Kynurenine--oxoglutarate transaminase 1 yes no 0 0 0 2 0 1 57.702 57.716 3 2.2286E-05 17730 20230619_1881_Aki_TMTPro18x_K_F2 121.68 103.95 36593 31105 34754 34379 30549 38561 32498 32145 44912 33821 32417 29901 36260 29917 36466 40816 40406 37929 33831 28505 35393 34516 32184 38528 33042 33332 44529 34009 34004 30562 36902 31442 37318 40666 38605 36065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14837000 28886 1545 27139 54277 43802 43802 1 9606 Homo sapiens 0.05049980996454906 VGYTPDWIFLLR Unmodified 1478.7922 0.79218606 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;A0A087WX41;P53675-2;P53675;A4FU99 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 0 4.5 0.5 1 1 65.459 65.487 2 0.0045529 20614 20230619_1883_Aki_TMTPro18x_K_F4 99.688 83.114 13624 8091.4 11718 10311 8620.3 15971 12130 12719 18289 15127 13875 16972 18590 16765 14086 19395 19094 25909 12562 7436.7 12015 10306 9361.7 15626 12218 13276 18103 15229 14665 17133 18624 17447 14710 19792 18268 24515 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31868000 28887 826 27140 54278;54279 43803 43803 1 9606 Homo sapiens 0.07194165591158708 VHAALVYHK Unmodified 1036.5818 0.58179936 3825 Q561W4;Q12972;B4E389 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay yes no 0 0 0 3 0 1 37.88 37.933 4 0.0001176 8763 20230619_1882_Aki_TMTPro18x_K_F3 141.47 114.37 94611 22603 64820 84578 137960 91342 116910 114710 191280 35499 35181 29572 29720 21320 44218 32575 31457 21875 86870 21350 69485 80282 136680 92390 121160 113460 183930 40227 43175 30102 31240 22865 43938 31998 30155 20925 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50986000 28888 3825 27141 54280 43804 43804 1 9606 Homo sapiens 0.0649717277963191 VHACGVNPVETYIR Unmodified 1613.7984 0.79841043 1489 A0A384P5L2;Q08257;A6NP24;Q08257-3;C9JH92 CRYZ Quinone oxidoreductase yes no 0 0 0 8 0 1 45.256 45.284 3 6.6276E-12 11583 20230619_1888_Aki_TMTPro18x_K_F8 182.89 164.29 74078 54418 78040 76528 83248 81149 97837 92529 102790 89795 97780 96973 102060 87812 95560 112060 106800 104110 68485 50018 79017 75540 86333 81974 97937 93677 104190 91124 100750 97868 103740 92143 97998 111730 102060 98974 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 306300000 28889 1489 27142 54281 43805 43805 1 9606 Homo sapiens 0.01606315760363941 VHAEAFSR Unmodified 915.45626 0.45626449 1687 A0A7P0T7Z9;A0A7P0T9B4;A0A7P0TAM5;A0A7P0T9U2;Q8NBU5-2;Q8NBU5;A0A7P0Z4J1 ATAD1 ATPase family AAA domain-containing protein 1 yes no 0 0 0 5.5 0.5 1 1 32.46 32.519 3 0.0002855 6586 20230619_1885_Aki_TMTPro18x_K_F5 151.04 111.49 24179 20018 30319 26790 25830 29665 32240 34396 41696 31860 30957 31870 34567 25975 28805 32288 33951 30861 22406 18381 30204 26549 27362 29877 32431 34730 41487 32345 32425 32152 34877 27336 29693 32257 32413 29338 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33913000 28890 1687 27143 54282;54283 43806 43806 1 9606 Homo sapiens -0.004845390765808588 VHAEAFSRPLSR Unmodified 1368.7262 0.72623176 1687 A0A7P0T7Z9;A0A7P0T9B4;A0A7P0TAM5;A0A7P0T9U2;Q8NBU5-2;Q8NBU5;A0A7P0Z4J1 ATAD1 ATPase family AAA domain-containing protein 1 yes no 0 0 1 2.5 0.5 1 1 35.794 35.851 4 2.1371E-05 8019 20230619_1881_Aki_TMTPro18x_K_F2 116.54 94.064 28184 19005 27989 27513 29715 33320 32393 36801 45428 23055 31347 28824 26902 23482 30505 27024 29031 29128 26031 17481 28474 27164 30827 33315 32908 36972 44884 24247 32617 28848 27777 24581 30856 27231 27791 27643 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41906000 28891 1687 27144 54284;54285 43807 43807 1 9606 Homo sapiens 0.05661769468974853 VHAENGELVAEGAK Unmodified 1422.7103 0.71030693 4008 Q53SW3;Q9BPU6 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 3 0.816 1 1 1 40.25 40.308 3 0.00019416 9721 20230619_1882_Aki_TMTPro18x_K_F3 94.673 74.834 73232 39026 77128 73869 75736 63272 64014 69706 72824 73140 86660 83599 82823 75671 82596 75782 89559 75312 67598 36070 77937 71568 78303 64939 65578 70875 74253 74040 88082 84132 84671 78290 84332 76168 85524 71589 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131350000 28892 4008 27145 54286;54287;54288 43808 43808 1 9606 Homo sapiens 0.015860184413895695 VHAEQVLNDK Unmodified 1151.5935 0.59348625 3010 Q96PC5;Q96PC5-10;Q59FD2;Q96PC5-12;Q96PC5-7;G3V599;Q96PC5-9;Q96PC5-14;Q96PC5-8;Q96PC5-6;Q96PC5-5;Q96PC5-13;Q96PC5-11;Q86UF2;A4D2H0;A0A5F9ZHA4;A0A2R8YE69;P0CG41;Q8IX94;A4FU28;Q8IX95;Q05BM1;Q8NEG8;Q4G155 MIA2;CTAGE6;CTAGE15;CTAGE8;CTAGE4;CTAGE9;CTAGE3P;CTAGE5;CTAGE1 Melanoma inhibitory activity protein 2;cTAGE family member 6;cTAGE family member 15;cTAGE family member 8;cTAGE family member 4;cTAGE family member 9;Putative cTAGE family member 3 no no 0 0 0 4 0 1 40.794 40.836 3 0.0025767 9917 20230619_1883_Aki_TMTPro18x_K_F4 69.721 53.147 74375 66188 77385 89442 113200 107400 99643 102060 125860 96065 110360 95837 99263 93707 99020 109710 111120 99483 68833 60766 78956 88618 114270 107140 102040 104450 126020 97476 113380 97328 101730 97520 101420 109400 106120 94641 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73992000 28893 3010 27146 54289 43809 43809 1 9606 Homo sapiens 0.02375325012326357 VHAIPLR Unmodified 804.49701 0.49700709 3730;1179 Q6FHM2;P62879;C9JIS1;C9JXA5;C9JZN1;E7EP32;F5H8J8;F5H100;F5H0S8;Q59G26;E9PCP0;F1T0G5;F1T0G4;P16520-2;P16520;B2R6K4;A0A140VJJ8;P62873;F6X3N5;A0A2L0WW42;P62873-2;A0A994J3T6;F6UT28;A0A994J6X8;B1AKQ8 GNB2;GNB3;GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 0 2.5 0.5 1 1 36.313 36.369 2 0.013544 8212 20230619_1881_Aki_TMTPro18x_K_F2 113.82 69.704 63111 40153 59291 71666 65762 63332 76753 67387 90171 49901 66588 55658 57787 46979 63400 60520 74136 54236 58247 37044 60718 69618 68034 64742 77114 68158 89982 51617 68985 56034 59536 49457 64939 60263 70692 51653 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50777000 28894 3730;1179 27147 54290;54291 43810 43810 1 9606 Homo sapiens 0.0869384703370315 VHAIQCDVR Unmodified 1096.5448 0.54476192 569 A0A024R9D7;Q16698-2;Q16698;E5RJG7;Q7LDK6;E5RFV2;E5RJD2 DECR1;DECR 2,4-dienoyl-CoA reductase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 33.446 33.487 3 4.8373E-07 6983 20230619_1885_Aki_TMTPro18x_K_F5 134.77 120.1 20314 13048 18802 19305 25614 29003 24904 27033 41185 20908 26946 27364 27723 23092 21206 25659 37608 32270 18747 12007 19335 19102 26088 28531 25637 27575 40392 21699 28337 27354 27984 24105 22604 26099 35788 30599 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14703000 28895 569 27148 54292;54293 43811;43812 43811 2 9606 Homo sapiens 0.00035133171559209586 VHCLNTLFSR Unmodified 1245.6288 0.6288259 2256 P26196;B2R858 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 0 5.5 0.5 1 1 47.275 47.353 3 3.5497E-07 12612 20230619_1885_Aki_TMTPro18x_K_F5 175.93 140.28 99895 56420 91792 95759 75242 78276 89562 96115 105170 73326 67988 47957 63976 58970 67140 80842 65258 56407 92129 52047 93679 93219 79849 80843 89988 96351 104680 74606 71211 50344 65622 61589 68189 79486 62395 53867 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113350000 28896 2256 27149 54294;54295 43813 43813 1 9606 Homo sapiens 0.01583664268468965 VHEHYLVHKPEK Unmodified 1514.7994 0.7993967 1972 H7C3I5;A6NND8;A6NHJ8;A6NMA8;O95825;H7C3S0;C9K0F7;F8WF64;O95825-2;C9JQD0;C9JAL0 CRYZL1 Quinone oxidoreductase-like protein 1 yes no 0 0 1 8 0 1 35.232 35.22 6 9.5932E-05 7682 20230619_1888_Aki_TMTPro18x_K_F8 107.85 81.174 62656 11847 43099 60322 59420 38122 53280 58606 59680 73223 90035 92983 94563 80412 50108 89463 73477 97287 57509 11346 45716 56539 60102 40682 54308 58868 61695 73765 91088 93076 94245 83837 53254 90078 70241 92234 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191150000 28897 1972 27150 54296 43814 43814 1 9606 Homo sapiens 0.06258898191617845 VHELCDNFCHR Unmodified 1485.6242 0.62415123 576 Q9HCQ4;O14770-2;U3KQ95;B2RC57;B3KPD8;A0A8V8TPB7;U3KPR8;B7Z6F6;H0YNY8;H0YKE5;A0A024R9I7;B7Z272;F5GYS8;B7Z4B3;A0A8V8TQU6;A0A8V8TPM6;A0A024R9J1;H0YKN2;E9PDC4;H0YMX5;B7Z4T5;O14770;O00470-2;O14770-5;O14770-6;U3KQI2;Q53RD5;O14770-7;O14770-8;O00470;O14770-3;B3KUX4;B3KP81;O14770-4;A0A024R9L4 meis1;MEIS2;MEIS1 Homeobox protein Meis2;Homeobox protein Meis1 yes no 0 0 0 5 0 1 36.802 36.895 4 7.5161E-10 8248 20230619_1885_Aki_TMTPro18x_K_F5 192.38 184.47 57570 55129 45350 54227 47565 50724 58563 55790 74689 65514 76475 56799 64185 64375 52232 59111 58401 62998 53197 50449 47174 54826 49566 51718 58892 56914 75181 65462 77679 58369 65389 65852 53706 59696 55850 59778 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83522000 28898 576 27151 54297 43815 43815 1 9606 Homo sapiens -0.0992358793657786 VHELNEEIGK Unmodified 1166.5932 0.5931519 4715;4568 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1;Q9NQ29-3;Q9NQ29;A8MYV2;Q1W6G4;Q53G47;Q9NQ29-2;D3DU41;B8ZZ10;B8ZZ09 LUC7L2;LUC7L Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 no no 0 0 0 3 0.816 1 1 1 42.864 42.927 3 7.1745E-06 10841 20230619_1882_Aki_TMTPro18x_K_F3 157.68 116.95 767640 272210 596520 713320 847520 711630 749790 817570 1009000 902580 1011500 902140 994850 800320 656260 1024100 835580 848420 706000 253790 624360 683250 856960 721900 769680 829940 1013100 907720 1035600 913080 999520 840660 685270 1014700 797840 807650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1362800000 28899 4715;4568 27152 54298;54299;54300 43816;43817;43818 43817 3 9606 Homo sapiens 0.01651905292465017 VHEYLGWHADCIR Unmodified 1654.7674 0.76744465 852 Q6ICJ4;A0A087WY67;Q6IB75;G9J6Q6;G9J6Q5;G9J6Q4;B2R533;P0CG30;P0CG29 Em:AP000351.3;GSTT2;GSTT2B Glutathione S-transferase theta-2B;Glutathione S-transferase theta-2 yes no 0 0 0 8 0 1 44.089 44.108 4 2.0301E-08 11145 20230619_1888_Aki_TMTPro18x_K_F8 166.6 146.55 47069 15064 29118 34710 35970 32929 30554 30913 58412 44080 38284 38401 50595 40393 29256 45398 34040 42558 43221 14022 31190 33373 36732 33375 31963 32075 57119 43725 40725 39300 50221 41882 30481 45337 32582 40420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57061000 28900 852 27153 54301 43819 43819 1 9606 Homo sapiens -0.033748375538607434 VHEYNVLLETLSR Unmodified 1571.8308 0.83075641 2239 B2R6S9;P30533;A8K8F6;A0A3B3IRQ7 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes no 0 0 0 8 0 1 57.374 57.426 3 3.0372999999999996E-21 16750 20230619_1888_Aki_TMTPro18x_K_F8 219.97 172.78 41484 23508 40469 44117 46390 40637 45345 46758 57615 50414 47268 45043 50541 40327 45565 55795 49616 54149 38277 21716 41291 42788 47625 41494 46160 47440 57591 50599 49109 45833 51233 42590 46703 55694 47464 51432 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 213520000 28901 2239 27154 54302 43820 43820 1 9606 Homo sapiens 0.06771426435057037 VHFEESSK Unmodified 961.45051 0.45051041 150 A0A024R1N4;P12956;P12956-2;B1AHC9;B2RDN9;B4DE32;B4E356 XRCC6 X-ray repair cross-complementing protein 6 yes no 0 0 0 3.5 0.5 1 1 37.858 37.906 3 4.7873E-05 8677 20230619_1883_Aki_TMTPro18x_K_F4 172.21 116.68 172270 63956 139720 190620 176750 199560 193120 183580 284770 207620 239810 332470 294180 275210 188910 221680 384910 450920 158500 59778 145530 181860 181390 200480 196460 189430 282890 212530 251010 329460 293930 283130 204930 236310 366840 425620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 262580000 28902 150 27155 54303;54304 43821;43822 43822 2 9606 Homo sapiens -0.03175682378889633 VHFHLPYR Unmodified 1067.5665 0.56648364 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;A0A7P0T8C6;Q05DV5;H7C5K1;G5E9U9;A4D1T0;Q9H0J9 ZC3HAV1;PARP12;ZC3HDC1 Zinc finger CCCH-type antiviral protein 1;Poly [ADP-ribose] polymerase 12 yes no 0 0 0 4 0 1 41.172 41.214 3 0.0025904 10066 20230619_1883_Aki_TMTPro18x_K_F4 91.626 72.896 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28903 2740 27156 54305 43823 43823 1 9606 Homo sapiens 0.03540305982460268 VHFPDPNK Unmodified 952.47667 0.47666558 2744 H3BUI7;F8WCT3;F8WB39;F8WDQ9;F8WD80;H3BSR4;C9JFD2;C9JSK8;C9J9P8;Q969M7-5;Q969M7-4;Q969M7-7;Q969M7-6;Q969M7;Q969M7-2 UBE2F-SCLY;UBE2F NEDD8-conjugating enzyme UBE2F yes no 0 0 0 7 0 1 43.046 43.125 3 0.0063406 10556 20230619_1887_Aki_TMTPro18x_K_F7 86.833 66.669 37616 26076 38886 40693 41593 44911 34762 38886 52219 38072 44871 35232 46227 36734 38051 50375 41768 44457 34759 24004 39437 39927 42831 44941 36007 40114 51874 38478 46360 36021 46735 38572 39113 50033 39946 42279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40569000 28904 2744 27157 54306 43824 43824 1 9606 Homo sapiens -0.0014736841676494805 VHGPGIQSGTTNKPNK Unmodified 1633.8536 0.85361712 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 0 1 5 0 1 36.083 36.174 4 9.043E-06 7981 20230619_1885_Aki_TMTPro18x_K_F5 114.59 87.617 33101 17545 27493 31811 40525 38235 34329 35536 47493 36845 46752 47950 48799 41026 40562 41150 47203 47828 30498 16206 28607 31008 40884 38107 35374 36524 47573 37530 48086 47937 49347 42559 41759 41729 45104 45354 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33586000 28905 3484 27158 54307 43825 43825 1 9606 Homo sapiens 0.06204445552521065 VHHEPQLSDK Unmodified 1188.5887 0.58873523 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-2;O43852-4;A0A024R755;B3KNG6;O43852-10;O43852-6;O43852-5;O43852-13;O43852-9;O43852-11;O43852-14;O43852-8;O43852-7;O43852-12 CALU Calumenin yes no 0 0 0 3.5 0.5 1 1 31.938 32.007 4 0.0015951 6372 20230619_1882_Aki_TMTPro18x_K_F3 93.111 65.782 115300 25001 81812 113530 148210 87957 120380 141640 178880 121430 170100 180980 165030 143800 100090 151490 107030 172800 105870 23794 86987 106880 147540 92120 124770 140430 178340 125650 174650 179780 165500 149930 103620 153160 102790 163660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129460000 28906 2386 27159 54308;54309 43826;43827 43826 2 9606 Homo sapiens 0.001984408695534512 VHIDIGADGR Unmodified 1051.5411 0.54105675 44 Q53F48;A0A024QZK8;P31942-2;P31942;P31942-3;B4DHY1;A0A024QZP1;P31942-4;P31942-6;P31942-5 HNRPH3;HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 yes no 0 0 0 5.29 1.67 1 2 1 1 1 1 41.067 41.123 2;3 4.291E-06 9958 20230619_1885_Aki_TMTPro18x_K_F5 139.43 100.66 294810 186600 276690 298360 334840 333180 342400 327110 378530 320340 387090 372380 390880 304500 354000 364090 389100 372030 272080 171890 283560 292430 343160 334070 345870 334490 383690 325760 396820 373510 396870 319590 362600 365360 371830 353340 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1092900000 28907 44 27160 54310;54311;54312;54313;54314;54315;54316 43828;43829;43830;43831 43829 4 9606 Homo sapiens 0.017347866693853575 VHIEIGPDGR Unmodified 1091.5724 0.57235688 1427;470;1404 P31943;G8JLB6;A0A384MEJ3;E9PCY7;H0YB39;Q68DG4;H0YBD7;H0YBG7;B4DP51;A0A024R7T3;P52597;B4DKS8;A0A384MDT2;P55795;B4DFK9;B4DP00 HNRNPH1;DKFZp686A15170;HNRPF;HNRNPF;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 0 0 3.5 1.12 1 1 1 1 41.463 41.53 3 6.5225E-08 10245 20230619_1882_Aki_TMTPro18x_K_F3 190.96 165.34 1105300 818850 928150 991600 1138800 1191000 1148200 1217600 1248200 1043400 1189100 1071100 1323300 1048800 1080800 1184300 1149500 986120 1020100 751430 961070 990010 1166400 1189900 1160400 1237000 1263100 1065000 1227800 1086300 1334200 1089700 1107500 1176800 1098000 939320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5710700000 28908 1427;470;1404 27161 54317;54318;54319;54320 43832;43833;43834 43832 3 9606 Homo sapiens 0.03023359703456663 VHIGQVIMSIR Oxidation (M) 1267.7071 0.70707622 3513 X1WI28;X5D2T3;P27635;F8W7C6;H7C123;H7C2C5;Q96L21 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like yes no 0 1 0 5.5 0.5 1 1 48.345 48.422 3 3.0771E-05 13027 20230619_1885_Aki_TMTPro18x_K_F5 134.3 92.802 38175 20882 32872 38911 45586 42473 40868 41438 48359 17434 21940 20960 19921 15034 27877 18076 23536 15293 35185 19293 34050 37824 46178 42639 41689 41773 47688 19063 23679 20943 20771 15864 27909 17996 22504 14585 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 433460000 28909 3513 27162 54321;54322 43835 43835 2182 1 9606 Homo sapiens 0.08393096853706083 VHIGQVIMSIR Unmodified 1251.7122 0.7121616 3513 X1WI28;X5D2T3;P27635;F8W7C6;H7C123;H7C2C5;Q96L21 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like yes no 0 0 0 6 0.816 1 1 1 52.304 52.38 3 3.0476E-17 14769 20230619_1885_Aki_TMTPro18x_K_F5 187.42 138.66 75887 41255 68727 63507 64601 79921 81769 75826 98675 37664 38021 28763 35041 30022 39363 33302 31721 24683 69968 38017 70336 62513 67993 79409 81915 76734 96929 39964 41688 29711 36086 31094 39494 32960 30375 23562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1086800000 28910 3513 27162 54323;54324;54325 43836;43837 43836 2 9606 Homo sapiens 0.09637400716314914 VHILDTESFETTFGPK Unmodified 1819.8992 0.89922991 3869 Q5T0F3;Q13823 GNL2 Nucleolar GTP-binding protein 2 yes no 0 0 0 6 0 1 59.531 59.592 3 4.4547E-08 17956 20230619_1886_Aki_TMTPro18x_K_F6 125.97 107.14 36393 22028 39461 35004 25807 31725 30238 32174 35845 41160 34635 39036 43104 34080 37553 39682 36402 45678 33620 20295 39594 34241 28031 32319 30444 33081 36199 41040 35994 39526 43438 35642 38235 40116 34905 43288 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32966000 28911 3869 27163 54326 43838 43838 1 9606 Homo sapiens 0.02207626224185333 VHLENMGSHDIVDGNHR Oxidation (M) 1944.8861 0.88605623 2337;3778;3779;859 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;F8W6C1;A0A024R674;P11277-2;P11277;P11277-3;A4QPE4;Q59FP5;B2RMN7;Q01082-2;Q01082-3;A0A087WYQ1;O15020-2;O15020 SPTBN1;SPTB;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, erythrocytic;Spectrin beta chain, non-erythrocytic 2 no no 0 1 0 3 0.816 1 1 1 32.596 32.659 5 2.5721E-09 6646 20230619_1882_Aki_TMTPro18x_K_F3 126.26 116.73 59080 36009 49969 55041 64503 56701 63909 70467 72351 67073 91230 109930 92783 91105 76106 99966 95752 89982 54473 33159 51751 54037 65747 57537 64757 70943 73940 69251 92888 109000 93943 94944 78898 99706 91385 85592 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76046000 28912 2337;3778;3779;859 27164 54327;54328;54329 43839 43839 503 1 9606 Homo sapiens -0.04859135106812573 VHLQTQQEVK Unmodified 1208.6513 0.65133548 1065 A0A0S2Z382;A0A0S2Z3G3;Q9UBX3;Q9UBX3-2;A0A0S2Z3I3;F6RGN5 SLC25A10 Mitochondrial dicarboxylate carrier yes no 0 0 0 6.5 0.5 1 1 37.985 38.054 3 1.259E-14 8752 20230619_1886_Aki_TMTPro18x_K_F6 237.84 193.94 85939 37771 82212 109460 133440 102550 120820 130040 156720 116160 132710 120700 135130 115030 99803 111230 125380 107670 79207 35236 84718 104410 133910 104820 123610 130550 156550 118330 137250 122170 136180 118630 103570 111640 119590 102360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 130440000 28913 1065 27165 54330;54331 43840;43841 43840 2 9606 Homo sapiens 0.05535586937753578 VHLVGIDIFTGK Unmodified 1297.7394 0.73942221 3110 I3L397;I3L504;P63241;P63241-2;Q6IS14;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 EIF5A;EIF5AL1;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like;Eukaryotic translation initiation factor 5A-2 yes no 0 0 0 2.5 0.5 1 1 61.054 61.074 3 4.4838E-10 18841 20230619_1882_Aki_TMTPro18x_K_F3 185.25 156.1 361790 150310 304450 331670 267730 297610 327160 325570 357730 429520 396470 411730 486700 404260 379220 530580 348140 452250 333070 139500 313640 319310 282760 303870 327490 333500 364720 427860 408940 418640 488580 423880 386690 526330 334120 430000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3384599999.9999995 28914 3110 27166 54332;54333 43842;43843 43843 2 9606 Homo sapiens 0.1024620752834835 VHMFEAHSDYIR Oxidation (M) 1519.6878 0.68779734 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258;B4E2C9;A0A7I2V3G0;A0A7I2YQF9;D6R997;D6RBZ7;D6RCL6;D6RBG7;D6RBT6 COPB2 Coatomer subunit beta' yes no 0 1 0 5.5 0.5 1 1 36.979 37.059 4 2.0282E-05 8388 20230619_1886_Aki_TMTPro18x_K_F6 134.13 118.59 157850 69322 154910 188040 235910 211250 201480 231040 234140 170480 204600 205930 180820 166180 173620 177790 196340 197010 145510 64573 158970 180190 237350 212170 206170 232960 235310 176650 210280 206140 185070 173290 177950 179560 187640 186910 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 90891000 28915 3031 27167 54334;54335 43844;43845;43846;43847 43847 1785 4 9606 Homo sapiens -0.05125904227838873 VHMFEAHSDYIR Unmodified 1503.6929 0.69288272 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258;B4E2C9;A0A7I2V3G0;A0A7I2YQF9;D6R997;D6RBZ7;D6RCL6;D6RBG7;D6RBT6 COPB2 Coatomer subunit beta' yes no 0 0 0 6.5 0.5 1 1 41.856 41.939 4 7.898E-18 10066 20230619_1887_Aki_TMTPro18x_K_F7 196.24 157.84 43403 20245 36129 39664 41243 38364 44130 46468 62994 35657 36512 36147 40176 31704 30818 45204 34615 40556 39970 18736 37397 38420 42507 39060 44889 46618 61966 36676 38850 36559 40442 33569 31796 44903 33124 38548 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251710000 28916 3031 27167 54336;54337 43848 43848 1 9606 Homo sapiens -0.038816003652300424 VHMWEQTVK Oxidation (M) 1172.5648 0.56482866 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 1 0 7 0 1 41.601 41.672 3 0.00052386 9947 20230619_1887_Aki_TMTPro18x_K_F7 106.68 88.819 51093 29509 45174 49465 54696 55458 57018 51909 67870 50537 56417 53971 55504 46032 54258 55103 59672 55133 47112 27213 46548 48360 56109 55526 57663 53257 68014 51291 58371 54386 56620 48229 55496 55232 57010 52382 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48009000 28917 1432 27168 54338 43849 43849 916 1 9606 Homo sapiens -0.014551158884842152 VHMWEQTVK Unmodified 1156.5699 0.56991404 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 7.5 0.5 1 1 45.75 45.813 3 4.291E-05 11808 20230619_1888_Aki_TMTPro18x_K_F8 130.66 107.28 102780 72101 106380 109940 110520 112690 115310 121690 147820 133590 130410 132050 128850 128910 140740 136950 141940 129650 94977 66348 107830 107930 114560 113930 117010 123990 148050 134360 134600 134000 132260 133410 142950 137120 135710 123260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112600000 28918 1432 27168 54339;54340 43850 43850 1 9606 Homo sapiens -0.002108120258753843 VHNDAQSFDYDHDAFLGAEEAK Unmodified 2478.0724 0.07239626 2386 B3KQF5;O43852;Q6IAW5;O43852-3;O43852-2;O43852-4;A0A024R755;B3KNG6;O43852-10;O43852-6;O43852-5;O43852-13;O43852-9;O43852-11;O43852-14;O43852-8;O43852-7;O43852-12 CALU Calumenin yes no 0 0 0 2.5 1.12 1 1 1 1 50.16 50.2 4 2.46E-17 14449 20230619_1880_Aki_TMTPro18x_K_F1 164.65 156.26 226250 91454 149020 179880 194300 140000 218670 230790 236750 232730 245610 281460 304230 246920 174530 310930 182840 328460 207950 84731 158600 173810 198480 146720 219590 229540 240590 236470 254220 282370 302340 259280 181040 311970 175870 311260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1423200000 28919 2386 27169 54341;54342;54343;54344 43851;43852;43853 43851 3 9606 Homo sapiens -0.10751704247923044 VHNEGLPAPIVR Unmodified 1300.7252 0.72516913 2769 CON__ENSEMBL:ENSBTAP00000024466;CON__ENSEMBL:ENSBTAP00000024462 yes no 0 0 0 7 0 1 41.174 41.245 3 0.010986 9788 20230619_1887_Aki_TMTPro18x_K_F7 66.393 49.452 + 34217 27270 35500 31123 44933 47220 41957 40344 52087 39211 48164 45851 44233 39537 41989 44654 54236 52060 31644 25003 36069 31339 45837 46379 42782 41650 52284 39924 49411 46051 45192 41262 43426 45197 51759 49376 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20512000 28920 2769 27170 54345 43854 43854 1 0.08683555100060403 VHPALNVSTR Unmodified 1092.604 0.60399136 3644 P53609-2;P53609 PGGT1B Geranylgeranyl transferase type-1 subunit beta yes no 0 0 0 2 0 1 35.131 35.188 3 6.9721E-08 7759 20230619_1881_Aki_TMTPro18x_K_F2 163.38 132.82 32450 21710 30760 31135 36935 37324 34641 39484 44421 32602 39343 40236 36258 32726 36543 39296 45793 37287 29958 19968 31477 30748 37807 37317 35373 39986 44454 33563 40477 40261 37144 34333 37677 39267 43666 35468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47615000 28921 3644 27171 54346 43855 43855 1 9606 Homo sapiens 0.061393524573986724 VHPAMATAAGGCR Oxidation (M) 1313.5969 0.59687385 3094 H7C561;H7C0N4;L0R8E5 SF1 yes no 0 1 0 8 0 1 27.359 27.389 3 8.8669E-05 4743 20230619_1888_Aki_TMTPro18x_K_F8 98.105 72.668 3818.6 2452.7 1715.2 3053.3 4857.5 3234.8 3947 4333.8 4018.4 2943.3 3417.6 2874.6 3169.3 4397.3 3949.3 2960.2 2964.8 3521.5 3510.1 2252.8 1970.5 3035.9 4760.4 3287.5 4031.5 4312.2 4063.6 3049.4 3522.7 2976.1 3290 4403.2 3942.6 3033.9 2850.1 3336.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3212100 28922 3094 27172 54347 43856 43856 1798 1 9606 Homo sapiens -0.04738071476981531 VHPEIINENGNPSYK Unmodified 1709.8373 0.83729835 3365 O95881 TXNDC12 Thioredoxin domain-containing protein 12 yes yes 0 0 0 5 0 1 44.147 44.226 3 1.2517E-07 11322 20230619_1885_Aki_TMTPro18x_K_F5 126.48 115.21 18643 12292 16680 21124 19102 25264 20268 22000 25331 23067 27284 31897 25868 23502 26283 24576 23524 30809 17203 11333 17177 20638 19727 25132 20529 22729 25585 23525 27873 31674 26468 24572 26560 25035 22584 29170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49611000 28923 3365 27173 54348 43857 43857 1 9606 Homo sapiens 0.010773195957654025 VHPETYEWAR Unmodified 1286.6044 0.60438529 4147 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 4 0 1 41.353 41.396 3 0.0021551 10159 20230619_1883_Aki_TMTPro18x_K_F4 82.914 63.152 54709 37135 75302 60121 108040 79340 85001 98571 72734 47924 55665 50900 46002 42384 84744 38134 51403 43174 50692 34204 75133 59110 108590 79263 86706 97939 74068 51220 57560 51285 49092 43767 83389 38833 49447 40984 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78997000 28924 4147 27174 54349 43858 43858 1 9606 Homo sapiens -0.02745272613378802 VHPNEEDPR Unmodified 1091.4996 0.49958587 2647 B4E215;Q8IWV8-4;Q8IWV8 UBR2 E3 ubiquitin-protein ligase UBR2 yes no 0 0 0 1 0 1 27.474 27.474 3 0.069608 5050 20230619_1880_Aki_TMTPro18x_K_F1 42.599 24.159 2903.8 1461.5 2856.8 3043.4 5054.5 3530.2 3214.9 4393 4437.2 4441.2 5467.7 7512.2 4561.6 4779.2 4405.8 2761.4 6819.3 4412.3 2678.3 1353.3 2936.9 2948.2 5013.1 3554.9 3389.4 4426.4 4493.4 4575.2 5534.7 7379.2 4685 4908.4 4605.4 2907.5 6484.7 4182.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4979100 28925 2647 27175 54350 43859 43859 1 9606 Homo sapiens -0.042503940899450754 VHQIELAPR Unmodified 1061.5982 0.5981777 405 H0YLY0;A0A024R6N2;Q9Y5S2;Q86TR8 CDC42BPB Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK beta yes no 0 0 0 7 0 1 37.937 38.001 3 0.028005 8481 20230619_1887_Aki_TMTPro18x_K_F7 59.153 39.882 135290 53776 91500 108980 107380 81380 117250 118550 141500 91171 98998 98628 98061 84347 82135 107900 116520 108350 124360 49853 96887 105100 110390 85240 118350 117840 140910 93880 103510 99368 99425 88716 85837 108000 111100 102940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32470000 28926 405 27176 54351 43860 43860 1 9606 Homo sapiens 0.06984253945756791 VHQLETQNR Unmodified 1123.5734 0.57341951 3949 Q16352 INA Alpha-internexin yes yes 0 0 0 4.5 0.5 1 1 29.364 29.436 3 2.1552E-12 5328 20230619_1883_Aki_TMTPro18x_K_F4 199.46 137.86 77040 27556 91917 71728 31239 28528 31678 38479 40333 68566 99475 107100 83258 79132 81943 48663 97248 103140 71100 25686 91039 68226 37202 32320 32402 39514 42987 68771 98608 105890 85453 80958 84003 52559 92939 97367 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 174140000 28927 3949 27177 54352;54353 43861;43862 43861 2 9606 Homo sapiens 0.01657574072373791 VHQLYETIQR Unmodified 1285.6779 0.67788459 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4H4;A0A7I2V4Y9;B3KTX4;A8K8J9;H0YI98 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 0 0 7.5 0.5 1 1 42.528 42.567 3 8.8949E-08 10516 20230619_1888_Aki_TMTPro18x_K_F8 169.93 130.67 111020 62880 103830 118670 105360 117680 124930 127070 158690 150290 163470 172850 182030 152180 124140 168630 176730 186810 102410 58094 106190 115160 109910 119190 125880 129790 159920 151340 168280 173720 182460 158560 130400 170080 168650 177200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 379240000 28928 1406 27178 54354;54355 43863 43863 1 9606 Homo sapiens 0.04647275829074715 VHQVLYR Unmodified 913.51339 0.51338544 1461 Q53EW8;A0A384NKQ2;Q16762;B4DVZ4;B1AH48 TST Sulfurtransferase;Thiosulfate sulfurtransferase yes no 0 0 0 2.5 0.5 1 1 34.006 34.067 3 0.0030089 7290 20230619_1881_Aki_TMTPro18x_K_F2 117.7 94.679 71652 43722 75452 76994 113360 118190 107050 111380 136000 70868 85860 86345 92150 71993 84293 71483 96427 87868 66178 40337 76920 75508 114550 116160 109130 113120 134700 74383 90730 86492 93465 74756 86442 72809 92084 83315 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53527000 28929 1461 27179 54356;54357 43864;43865 43864 2 9606 Homo sapiens 0.05316928199795257 VHSDFTAAATR Unmodified 1174.5731 0.57308516 1549 A0A494C0R8;K7EIG1;O75153;I3L2B0 CLUH Clustered mitochondria protein homolog yes no 0 0 0 6.5 0.5 1 1 34.995 35.06 3 1.1587E-12 7643 20230619_1886_Aki_TMTPro18x_K_F6 208.56 184.57 44822 23559 38054 43808 44283 46464 42014 41264 47165 46363 45529 41156 52593 35839 39074 54687 53682 39551 41301 21770 39340 42568 45447 46639 42658 42657 47719 46429 47055 41875 52765 38163 40858 53760 51124 37778 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68878000 28930 1549 27180 54358;54359 43866 43866 1 9606 Homo sapiens -0.007218456474902268 VHSEVASLQEK Unmodified 1225.6303 0.63026569 4713 Q9Y305-3;Q9Y305-2;Q9Y305;Q9Y305-4;Q9H2R8 ACOT9 Acyl-coenzyme A thioesterase 9, mitochondrial yes no 0 0 0 4 0 1 40.063 40.105 3 5.7667E-09 9607 20230619_1883_Aki_TMTPro18x_K_F4 172.21 134.52 58762 32920 56451 64882 84411 81088 77477 87428 85445 56730 77198 86086 74303 62346 71908 66055 86341 79401 54211 30437 58001 63054 85189 80870 78767 88026 86158 59882 79535 85255 75824 65287 73921 67093 82423 75299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53014000 28931 4713 27181 54360 43867 43867 1 9606 Homo sapiens 0.026475768382169917 VHSFPTLK Unmodified 927.5178 0.51780212 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;I3L3P5;A0A7P0T9K9;I3L0S0;Q96C96;B3KTQ9 P4HB Protein disulfide-isomerase yes no 0 0 0 3 0.816 1 1 1 45.176 45.243 3 0.00059364 11805 20230619_1883_Aki_TMTPro18x_K_F4 119.21 88.524 1199200 588040 867620 891320 976280 1067600 1085800 878690 1171500 837290 1037500 941390 971320 789910 1193600 1091400 1132900 1125400 1103600 542110 910720 877100 1009200 1061500 1090500 910360 1181800 852450 1067900 946880 1003800 835930 1205900 1094000 1084500 1068600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1321600000 28932 537 27182 54361;54362;54363 43868;43869 43869 2 9606 Homo sapiens 0.05114392622726882 VHSGERPFACEECGRR Unmodified 1945.8635 0.86354665 905 A0A090N8Z2;A8K9F5;A0A090N8H1;Q9BWE0;Q9BWE0-4 REPIN1 Replication initiator 1 yes no 0 0 2 5.5 0.5 1 1 28.68 28.732 5 1.9223E-14 5220 20230619_1885_Aki_TMTPro18x_K_F5 145.46 119.31 40908 29211 37685 39588 47166 45256 44965 47085 57906 39049 41057 37799 41042 36735 38798 39665 46168 38935 37772 26841 38696 39200 48157 45382 45855 47749 57535 39895 42894 38415 41811 38077 39899 39776 44052 37015 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22376000 28933 905 27183 54364;54365 43870;43871 43870 2 9606 Homo sapiens -0.07155057776049034 VHSPPASLVPR Unmodified 1158.6509 0.65094155 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3;Q9BTE3-3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 0 2.5 0.5 1 1 38.733 38.793 3 3.0393E-06 9150 20230619_1881_Aki_TMTPro18x_K_F2 122.69 101.14 190550 145260 167450 181140 197290 202540 205420 208910 270400 246120 251980 234430 276610 234960 215040 281100 276390 234430 175950 133320 172540 180280 202820 203370 208630 213920 271040 246480 260270 238660 278660 244740 223490 278960 263560 223310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 178060000 28934 1140 27184 54366;54367 43872 43872 1 9606 Homo sapiens 0.07796212008565817 VHSPSGALEECYVTEIDQDK Unmodified 2276.0267 0.026691621 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5 FLNA;FLJ00119 Filamin-A yes no 0 0 0 2 0.816 1 1 1 53.017 53.047 3 1.4078E-16 15759 20230619_1881_Aki_TMTPro18x_K_F2 164.58 151.31 68460 35949 63453 71910 76109 71450 76071 79492 76393 83723 92323 93138 96262 74612 78094 98232 91766 109690 63123 33258 65102 69603 77948 72441 76740 80763 78486 84627 94137 93521 97206 78873 80604 98904 87793 104000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 298900000 28935 3484 27185 54368;54369;54370 43873;43874 43874 2 9606 Homo sapiens -0.06028065754526324 VHSQIPQR Unmodified 963.52501 0.52501276 3292 O75064 DENND4B DENN domain-containing protein 4B yes yes 0 0 0 8 0 1 28.57 28.596 3 0.00069676 5176 20230619_1888_Aki_TMTPro18x_K_F8 126.28 104.19 9285.4 4368.8 9440.9 8834 11892 10340 9586.3 10193 12796 7095.7 10192 9620.2 9526 7050.6 8416.7 6020.1 11281 6920.2 8564.3 4045.2 9605.7 8569.1 12079 10337 9900.4 10340 12729 7422.8 10544 9565.2 9687 7306.9 8720.3 6126.9 10735 6579.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1927400 28936 3292 27186 54371 43875 43875 1 9606 Homo sapiens 0.04179125223140545 VHSVAWSCDGR Unmodified 1272.567 0.56695393 4368 Q96J01;D6RGZ2;Q96J01-2 THOC3 THO complex subunit 3 yes no 0 0 0 6.5 0.5 1 1 37.399 37.468 3 7.2104E-05 8257 20230619_1887_Aki_TMTPro18x_K_F7 124.46 100.16 44191 25431 45456 45617 50278 61632 52971 53823 69170 44092 50429 50182 54212 44278 45732 48008 76613 58002 40796 23476 46155 44585 51985 60870 53742 55255 68717 45325 52776 50482 54843 46089 48356 48737 72875 55053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83800000 28937 4368 27187 54372;54373 43876 43876 1 9606 Homo sapiens -0.05842687150675374 VHSYLER Unmodified 902.46102 0.46101552 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5QJR3;A0A8I5KV76;A0A8I5KRF4;A0A8I5KSH0;A0A8I5KVZ4;A0A8I5KQU6;A0A8I5KRC9;A0A8I5KTR5;A0A8I5KPV0 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 0 6.5 0.5 1 1 33.678 33.739 3 0.0010134 7190 20230619_1886_Aki_TMTPro18x_K_F6 154.01 120.46 333990 111810 270200 312780 352780 322300 313120 319250 389880 366890 494050 539860 412190 406100 407720 430950 491350 467100 307210 104450 281170 299050 358600 324910 320480 327740 396740 373470 498680 535500 423470 424240 419410 434700 469140 443360 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 260000000 28938 1785 27188 54374;54375 43877;43878;43879;43880 43880 4 9606 Homo sapiens 0.005883450661826828 VHTFVVDCSNREDIYSSAK Unmodified 2226.0375 0.037531078 2846 D6RCD0;Q8NBQ5 HSD17B11 Estradiol 17-beta-dehydrogenase 11 yes no 0 0 1 7 0 1 46.209 46.296 4 2.9784E-19 11842 20230619_1887_Aki_TMTPro18x_K_F7 181.34 156.02 124270 67511 108280 141560 127590 132720 138450 136850 153320 175390 147350 146110 187660 138110 136530 214020 170290 196720 114550 62493 111810 136580 131270 134880 139400 140570 155330 174260 153180 149470 187710 146850 142030 212620 162790 186930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280590000 28939 2846 27189 54376 43881 43881 1 9606 Homo sapiens -0.026446185896020324 VHTGERPFACQDCGR Unmodified 1788.7784 0.77842004 4526 Q9H7X3 ZNF696 Zinc finger protein 696 yes yes 0 0 1 6 0 1 31.561 31.594 4 2.1593E-07 6370 20230619_1886_Aki_TMTPro18x_K_F6 132.05 124.99 9503.9 5175.9 9081.1 10722 14252 13025 12753 13572 17138 9192.8 14096 13160 11644 12229 13885 9071.2 14569 13248 8766.4 4790.1 9345.7 10391 14341 13003 13076 13708 17055 9661.3 14496 13152 12086 12471 14090 9418.4 13923 12544 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9482000 28940 4526 27190 54377 43882 43882 1 9606 Homo sapiens -0.08441803241862544 VHTGERPYK Unmodified 1085.5618 0.56179219 103 Q92970;A0A024R0Q1;Q3KQV3;B4E3U6;B4DR23;A0A024R775;S4R3B8;M0R230;F5H290;B4DWJ4;B2RB98;A0A024R7B1;B3KPP0;K7EIK6;Q59F42;E9PJX9;Q96HQ0-3;B2R9D8;E9PJZ3;A8K3T5;B3KS08;B3KTM5;A8K7J8;B3KY01;Q4W5N2;Q6B0D6;F5H435;A0A024R7V2;A0A024R4Q0;Q96PQ6-3;Q96PQ6;Q6PK81;Q6PK81-2;Q8TAU3;Q9Y2P7;Q02386;Q13106;Q96NJ3-2;Q3SY52-2;P17097;P17097-2;Q3SY52-3;Q16600;Q96SQ5;Q96NJ3;Q8NEK5;Q3SY52;Q96HQ0-4;Q59FT8;Q96PQ6-4;Q96HQ0;Q96HQ0-5;Q8TAU3-2;Q9Y2P7-2;Q96HQ0-2;Q8NEK5-2;Q15928;Q96PQ6-2;Q9C0F3;Q96HQ0-6;Q96SQ5-2;Q9P2Y4 zf30;ZNF45;ZNF792;ZNF548;ZNF317;ZNF417;ZNF7;ZNF285;ZNF419;ZNF141;ZNF285A;ZIK1;ZNF239;ZNF154;ZNF773;ZNF256;ZNF587;ZNF436;ZNF219 Zinc finger protein 792;Zinc finger protein 419;Zinc finger protein 317;Zinc finger protein 773;Zinc finger protein 417;Zinc finger protein 256;Zinc finger protein 45;Zinc finger protein 154;Zinc finger protein 285;Zinc finger protein interacting with ribonucleoprotein K;Zinc finger protein 7;Zinc finger protein 239;Zinc finger protein 587;Zinc finger protein 548;Zinc finger protein 141;Zinc finger protein 436;Zinc finger protein 219 yes no 0 0 1 8 0 1 30.612 30.628 4 0.0076152 5867 20230619_1888_Aki_TMTPro18x_K_F8 70.363 25.34 57086 20568 49293 56699 69409 63969 68257 67647 80668 65724 84589 81689 84870 75541 62743 54591 102550 85780 52542 19195 51060 54313 70403 64175 69254 68805 81567 67041 86562 81966 85614 77046 66327 56982 97619 81205 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59960000 28941 103 27191 54378 43883 43883 1 9606 Homo sapiens 0.02243377049035189 VHTGFDQHEQK Unmodified 1324.616 0.61601261 94 A8K724;A0A024R0J1;O96013;A0A024R0L8;O96013-2;O96013-3;O96013-4;M0R3G6;M0R2X4;M0R0L9 PAK4 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 4 yes no 0 0 0 4 0 1 33.353 33.407 4 1.2395E-06 6901 20230619_1883_Aki_TMTPro18x_K_F4 138.63 122.87 36914 12130 29885 31856 35525 29656 26978 25156 55315 44535 56407 41676 49535 41580 27755 43419 33958 35381 33952 11318 31016 30480 36232 30049 28572 26542 54739 43935 57361 42475 49725 42984 29039 43117 32441 33685 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11718000 28942 94 27192 54379 43884 43884 1 9606 Homo sapiens -0.033310755900402 VHVCAECGK Unmodified 1058.4637 0.46373441 3502 P25490;A0A994J726;O15391 YY1;YY2 Transcriptional repressor protein YY1;Transcription factor YY2 yes no 0 0 0 5.5 0.5 1 1 35.154 35.225 3 4.0587E-05 7720 20230619_1886_Aki_TMTPro18x_K_F6 148.52 113.08 66156 26235 68403 78858 96479 78960 74256 87692 79694 59809 100360 91319 90896 74216 75147 51726 98787 81990 60993 24514 69740 75208 97170 79996 76393 88230 81598 62896 101490 90715 92297 75968 77852 54130 94174 77616 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 53333000 28943 3502 27193 54380;54381 43885;43886 43886 2 9606 Homo sapiens -0.06315890862811102 VHVDCMTSQK Oxidation (M) 1219.5325 0.53254226 2980 F8VPD4;P27708;Q53SY7;H7C3Z5 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 1 0 5.5 0.5 1 1 33.997 34.063 3 7.4311E-06 7176 20230619_1885_Aki_TMTPro18x_K_F5 153.1 127.89 46816 22071 42107 47106 58871 51695 48858 57461 59975 57898 59319 55978 63413 54761 49528 61617 77792 70018 43139 20454 43427 45534 59478 52045 50208 58279 60472 58429 61030 56895 63968 56908 52228 62241 74104 66443 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51558000 28944 2980 27194 54382;54383 43887;43888 43887 1767 2 9606 Homo sapiens -0.06844271353770637 VHVDCMTSQK Unmodified 1203.5376 0.53762763 2980 F8VPD4;P27708;Q53SY7;H7C3Z5 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 6.5 0.5 1 1 38.75 38.823 3 5.8993E-14 8768 20230619_1887_Aki_TMTPro18x_K_F7 219.03 178.68 187000 118930 190210 181850 259140 247810 230350 219410 280600 245970 254900 229880 272860 217760 229010 268790 304340 255650 172700 109490 193900 179280 262690 244950 235410 226760 282000 246810 263310 233830 275830 227800 237990 268440 290130 243130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 141950000 28945 2980 27194 54384;54385 43889;43890;43891 43891 3 9606 Homo sapiens -0.05599967491161806 VHVGDEDFVHLR Unmodified 1421.7052 0.70516197 3379 Q76LA1;P04080 CSTB Cystatin-B yes no 0 0 0 3 0.816 1 1 1 44.377 44.443 4 1.8346E-31 11477 20230619_1883_Aki_TMTPro18x_K_F4 218.55 194.26 332570 88300 237510 292840 313460 214690 331710 347320 378470 374300 368210 390230 433640 347610 267000 479710 318550 430870 305490 83020 250510 277590 319290 226010 334780 346360 382680 377170 381060 394130 432440 366970 278520 476550 305070 409350 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 933600000 28946 3379 27195 54386;54387;54388 43892;43893;43894 43894 3 9606 Homo sapiens 0.011177593694583265 VHVIFNYK Unmodified 1018.56 0.56000128 1691 A0A7P0T861;K7EL50;Q53G71;V9HW88;P27797;B4DHR1;K7EJB9;B4E2Y9 CALR;HEL-S-99n Calreticulin yes no 0 0 0 4.5 0.5 1 1 49.071 49.129 3 0.00016232 13367 20230619_1885_Aki_TMTPro18x_K_F5 160.91 88.367 633860 382150 488230 473650 647020 945420 639770 682480 1299900 119250 104620 110720 130780 147450 242030 157440 267520 130000 584040 351100 510700 476810 662960 913210 664670 699860 1235200 153270 164800 114630 138940 151220 245010 156830 254760 124270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 767470000 28947 1691 27196 54389;54390 43895;43896 43896 2 9606 Homo sapiens 0.051463680310803284 VHVQFFDDSPTR Unmodified 1446.6892 0.68917755 1853 P52701;A0A8V8TQJ0;A0A494C0M1;P52701-2;Q1L838;A0A8V8TPJ4;Q3SWU9;A0A8V8TPR2;F8WAX8;C9J7Y7;C9J8Y8;C9JH55 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 5.5 0.5 1 1 47.973 48.051 3 5.4787E-06 12900 20230619_1885_Aki_TMTPro18x_K_F5 140.31 119.85 179990 129080 198380 200650 239950 241490 217090 223200 250520 189960 235160 228660 228350 194630 248780 173300 240280 221390 166450 118800 200590 197200 245130 240640 221290 228390 252510 195040 241730 229200 234220 200810 251710 177460 229850 209830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 219470000 28948 1853 27197 54391;54392 43897;43898 43897 2 9606 Homo sapiens -0.016299468674560558 VHYENNSPFLTITSMTR Oxidation (M) 2024.9626 0.96257522 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 1 0 1.5 0.5 1 1 50.667 50.719 3 2.5551E-06 14736 20230619_1881_Aki_TMTPro18x_K_F2 102.5 85.625 39536 27786 35143 42691 38800 43204 46082 45566 43800 38930 47061 41164 40285 35801 42560 46443 39325 40467 36492 25571 36171 41872 40204 43681 45970 46219 44846 39765 47807 41554 41440 37650 43084 46158 37665 38494 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47144000 28949 3384 27198 54393;54394 43899;43900 43900 1994 2 9606 Homo sapiens -0.008907563302273047 VHYENNSPFLTITSMTR Unmodified 2008.9677 0.9676606 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;B4DL99;B7Z4L4 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 2.5 0.5 1 1 55.692 55.722 3 2.1124E-48 16870 20230619_1881_Aki_TMTPro18x_K_F2 281.49 241.26 80704 47072 71659 77409 82423 87791 95655 97199 102880 86507 84796 94570 99142 84639 90896 98572 86490 99794 74422 43397 73752 75788 85104 88156 95880 98345 103650 88256 88562 95296 100340 88368 92378 98886 82888 94723 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1228100000 28950 3384 27198 54395;54396 43901;43902 43901 2 9606 Homo sapiens 0.003535475324042636 VIAALLQTMEDQGNQR Unmodified 1785.9043 0.90433206 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6 IPO5;RANBP5 Importin-5 yes no 0 0 0 1.5 0.5 1 1 65.725 65.729 3 2.2899E-11 20832 20230619_1880_Aki_TMTPro18x_K_F1 161.21 154 8236.5 7047.9 9161 6890.4 8249.2 8000.2 6721.9 7018.9 9686.1 9113.1 10128 9326.8 8620 9792.2 10710 9690.7 11379 10848 7625.3 6451.8 9197.4 6995.7 8594.9 7991.8 6966.2 7293.1 9716.4 9109.7 10302 9476.6 8962.7 10071 10885 9809.4 10877 10294 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48118000 28951 782 27199 54397;54398 43903;43904 43903 2 9606 Homo sapiens 0.04281606815197847 VIACDGGGGALGHPK Unmodified 1407.6929 0.69288272 3301 O75380;Q6IBC4;D6RBT3 NDUFS6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial yes no 0 0 0 7.5 0.5 1 1 41.841 41.875 3 3.1968E-11 10248 20230619_1888_Aki_TMTPro18x_K_F8 166.03 138.36 117740 110600 114380 120020 165510 179800 149540 154460 170740 123520 142960 126370 152440 128360 131910 145770 142210 116290 108950 101300 117280 121230 167440 176720 152330 158650 171510 126700 148280 128380 154310 133220 135130 144550 135780 110860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 201220000 28952 3301 27200 54399;54400 43905;43906 43906 2 9606 Homo sapiens 0.005343996347846769 VIACFDSLK Unmodified 1051.5372 0.53721693 924 Q9NR56;Q9NR56-5;Q9NR56-2;C9JP00;Q9NR56-6;Q9NR56-7;H7C4T5;A0A0A0MQX8;Q9NR56-3;Q9NR56-4;B4E3F7;A0A8I5KU79 MBNL1 Muscleblind-like protein 1 no no 0 0 0 4.5 3.5 1 1 59.854 59.854 2;3 0.00030313 18425 20230619_1880_Aki_TMTPro18x_K_F1 107.47 72.744 75599 67779 68979 76641 86481 117320 102430 90912 129240 41924 39516 40973 40133 35182 57584 45260 40016 42286 69895 62113 70983 77188 89094 114870 103040 93406 126270 45165 44849 41489 41809 37008 57212 45197 38473 40187 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100350000 28953 924 27201 54401;54402 43907;43908;43909 43907 3 9606 Homo sapiens 0.013509808512935706 VIADNVK Unmodified 757.4334 0.43340378 3674 V9HWK1;P60174;P60174-3;B4DUI5;Q53HE2;P60174-4;Q2QD09;U3KPZ0;U3KQF3 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 5.8 0.748 2 2 1 43.879 43.963 2;3 0.0056045 11214 20230619_1885_Aki_TMTPro18x_K_F5 105.39 26.275 1306000 608370 1622000 1646800 2186300 2433700 1574500 1962300 1934800 1417600 2155300 2284200 1717200 1751900 2184600 868600 2303000 1929600 1206800 566440 1629800 1585500 2209900 2387900 1635900 2021600 1957100 1489000 2183500 2259400 1790500 1777600 2212100 951190 2199700 1822900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1756399999.9999998 28954 3674 27202 54403;54404;54405;54406;54407 43910;43911;43912 43910 3 9606 Homo sapiens 0.044984418059470954 VIAEGDLGIVEK Unmodified 1241.6867 0.68671794 3362 V9HWF9;O95861-4;O95861;A6NF51;O95861-2;F8W1J0;F8VVW8;F8VZG4 HEL20;BPNT1 3'(2'),5'-bisphosphate nucleotidase 1 yes no 0 0 0 4 0 1 58.021 58.025 3 1.3484E-05 17502 20230619_1883_Aki_TMTPro18x_K_F4 110.66 87.744 63102 42744 56632 61472 60514 59416 56465 59692 64258 72895 72070 61397 75303 65029 71069 78475 82287 93551 58237 39312 58135 60498 62408 60253 57446 61309 65397 72607 73650 63023 76565 67714 73006 79455 78701 88655 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78161000 28955 3362 27203 54408 43913 43913 1 9606 Homo sapiens 0.07554204674897846 VIAGLYQR Unmodified 918.5287 0.52870115 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 3.5 0.5 1 1 48.513 48.572 2 0.0037684 13295 20230619_1883_Aki_TMTPro18x_K_F4 118.42 98.5 343920 274340 288640 328580 374890 468490 396920 409780 456950 118260 142760 129650 108690 119990 219150 151730 156060 107160 317540 251650 299470 329140 383800 461520 400480 414810 448400 136130 159940 131180 117580 125550 217030 149720 149590 102440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 316780000 28956 3758 27204 54409;54410 43914 43914 1 9606 Homo sapiens 0.06617794996986959 VIAHTQMR Oxidation (M) 970.50183 0.50183448 3567 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;Q49AJ9;B5MCW2;H7C422;H7C3M2 RPL3;rpl3 60S ribosomal protein L3 yes no 0 1 0 2.83 1.95 2 2 1 1 27.051 27.095 3 0.0032704 4765 20230619_1880_Aki_TMTPro18x_K_F1 93.429 66.298 67295 59920 71272 59951 89516 106570 78127 83652 116070 24439 29930 26725 24000 19072 42814 24325 34528 24327 62290 54854 72283 61194 91357 103690 80555 85410 112360 28135 34511 26834 25609 20208 42640 24421 33046 23144 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 109350000 28957 3567 27205 54411;54412;54413;54414;54415;54416 43915;43916;43917;43918 43915 2238 4 9606 Homo sapiens 0.015403631141793994 VIAHTQMR Unmodified 954.50692 0.50691985 3567 P39023;Q8TBW1;Q96QL0;Q9NY85;G5E9G0;Q9BT63;Q49AJ9;B5MCW2;H7C422;H7C3M2 RPL3;rpl3 60S ribosomal protein L3 yes no 0 0 0 3.67 3.09 1 1 1 31.283 31.314 3 1.5062E-09 6080 20230619_1888_Aki_TMTPro18x_K_F8 173.68 119.47 391200 291100 339380 316060 492250 567420 443630 420560 648910 100250 109430 100940 93399 87070 198380 92758 134150 82311 361140 266860 351280 320470 498620 551220 455850 431140 626160 119750 137090 102280 101120 90519 195720 92902 128620 78480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259730000 28958 3567 27205 54417;54418;54419 43919;43920;43921 43921 3 9606 Homo sapiens 0.027846669767882304 VIAPNPAQLQGQR Unmodified 1390.7681 0.76809658 1158 A0A0U1RRM1;B3KSZ4;Q8WXI9;A0A994J4D5;A0A0U1RR30 GATAD2B Transcriptional repressor p66-beta yes no 0 0 0 2 0 1 46.769 46.845 2 7.9027E-08 12982 20230619_1881_Aki_TMTPro18x_K_F2 144.66 101.63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28959 1158 27206 54420 43922 43922 1 9606 Homo sapiens 0.08834325157499734 VIAQLSECEK Unmodified 1175.5856 0.58562368 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90 RAD50 DNA repair protein RAD50 yes no 0 0 0 5 0 1 51.519 51.594 3 3.8079E-05 14434 20230619_1885_Aki_TMTPro18x_K_F5 128.81 111.6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28960 4309 27207 54421 43923 43923 1 9606 Homo sapiens 0.004854297005294939 VIASELGSMPELK Unmodified 1372.7272 0.72720254 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;Q9H8E3;Q9P2J5-3;Q9HAM7;Q9NPU8;B3KXA9 LARS;DKFZp762P233 Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 7 0 1 61.764 61.803 3 0.00025271 18581 20230619_1887_Aki_TMTPro18x_K_F7 95.273 68.304 292280 231610 268710 287840 228920 291480 281610 296950 312220 357480 344460 390610 398670 359490 350540 415600 391630 467440 270030 212540 274480 286150 242720 294510 281990 304590 317910 358950 354590 393860 403030 374800 359950 419440 374830 443150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219320000 28961 1603 27208 54422 43924 43924 1 9606 Homo sapiens 0.055748030030144946 VIATFTCSGEK Unmodified 1211.5856 0.58562368 2459 B4DE91;P49189;B4DX14;P49189-3 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 4.5 3.5 1 1 52.787 52.825 3 0.00013942 14757 20230619_1888_Aki_TMTPro18x_K_F8 112.83 90.636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28962 2459 27209 54423;54424 43925;43926 43926 2 9606 Homo sapiens -0.01170570299495921 VIAVADDFCK Unmodified 1136.5536 0.55359527 4548 Q9HC35;B5MBZ0;Q9HC35-2;B4DIT9 EML4 Echinoderm microtubule-associated protein-like 4 yes no 0 0 0 5 0 1 57.67 57.729 3 0.0095072 16952 20230619_1885_Aki_TMTPro18x_K_F5 68.893 41.778 126320 93935 108840 112560 112480 129740 114560 114580 131090 127390 120830 113250 138670 117180 125100 147470 129080 126950 116600 86191 112090 112380 116710 129550 115930 118440 132270 127670 125200 115820 140320 122340 127800 146500 123450 120800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131400000 28963 4548 27210 54425 43927 43927 1 9606 Homo sapiens -0.009219379826163276 VICAEEPYICK Unmodified 1380.6418 0.64175835 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 6 0 1 54.145 54.222 3 6.79E-05 15703 20230619_1886_Aki_TMTPro18x_K_F6 125.75 109.99 296790 245560 291110 305770 264700 334890 318000 345140 347430 417200 381540 357830 432420 325800 323790 447490 405520 405810 274410 225300 295940 304270 278810 336560 318630 353650 354070 415800 391810 365000 434310 343770 336360 445020 387210 385880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 372010000 28964 1182 27211 54426 43928 43928 1 9606 Homo sapiens -0.03333685454299484 VICILSHPIK Unmodified 1178.6845 0.68454987 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q8TB95;B3KVE3;Q5SX91 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 0 4.5 0.5 1 1 54.747 54.787 3 7.411E-06 15758 20230619_1885_Aki_TMTPro18x_K_F5 157.24 118.84 459410 434100 451650 444400 509020 650270 561040 532590 573390 98863 105000 101450 96190 97494 220270 127610 124670 114190 425150 397400 460440 450830 526190 639040 562650 540680 563180 124160 129740 103230 104640 102200 216010 127300 120140 108640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1033799999.9999999 28965 2533 27212 54427;54428 43929;43930 43930 2 9606 Homo sapiens 0.1023549745609671 VIDFDENTALDDAEEESFRK Unmodified 2342.055 0.055014861 3884 Q14257;Q14257-2;H0YL43 RCN2 Reticulocalbin-2 yes no 0 0 1 1 0 1 61.233 61.233 3 1.6919E-29 18974 20230619_1880_Aki_TMTPro18x_K_F1 194.92 184.52 44072 35368 40479 44644 42743 49085 51621 50806 49229 55492 54457 56514 50122 50176 59115 59043 58026 67261 40719 32459 41487 44382 44461 49330 51463 51907 50525 55841 55482 57104 51770 52418 59898 59649 55594 63764 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46730000 28966 3884 27213 54429 43931 43931 1 9606 Homo sapiens -0.06233044573536972 VIDGPHSGR Unmodified 936.47773 0.47772821 2503 B4DJK4;B4E0Q4;B4DZJ7;O00267-2;O00267 SUPT5H Transcription elongation factor SPT5 yes no 0 0 0 5 0 1 29.656 29.73 3 0.00017178 5603 20230619_1885_Aki_TMTPro18x_K_F5 109.29 85.318 25525 16915 32788 39378 40409 41274 35540 41245 39100 35359 48090 58103 47571 42705 36042 24216 51258 48509 23630 15671 32852 37894 41194 41556 36256 41984 39971 36730 48946 57349 48037 43590 37621 26042 48877 45827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16155000 28967 2503 27214 54430 43932 43932 1 9606 Homo sapiens 0.006948459521481709 VIDPATATSVDLR Unmodified 1356.7249 0.72489436 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 5 0.816 1 1 1 53.065 53.121 2 4.0535E-15 15037 20230619_1885_Aki_TMTPro18x_K_F5 250.78 186.69 454080 402100 431910 483160 425330 483940 451570 459570 505680 545750 522520 508940 586290 482020 520540 601560 559830 605780 419920 368710 440780 481290 443230 488800 455650 473530 513170 545790 538020 517550 593110 504590 533110 602580 535580 575160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2842900000 28968 3622 27215 54431;54432;54433 43933;43934;43935 43934 3 9606 Homo sapiens 0.060800905895803226 VIDPVAPR Unmodified 865.50215 0.50215205 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 5.5 0.5 1 1 44.087 44.172 2 0.0014915 11275 20230619_1885_Aki_TMTPro18x_K_F5 141.78 90.094 288130 217640 269530 300630 344250 336680 331710 322310 369100 362430 379390 394280 412030 312790 358130 432850 443820 424860 266160 199990 276620 297170 351040 337440 336310 331360 374440 365080 390280 396130 416750 331830 370250 432360 423680 403690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 540310000 28969 3402 27216 54434;54435 43936;43937 43936 2 9606 Homo sapiens 0.06402106105656458 VIECDVVK Unmodified 960.49502 0.49501776 1111 A0A0S2Z4Z0;Q96PK6;A0A0S2Z567;Q96PK6-2;A0A0A6YYI9;A0A0S2Z5V2;F8WDX3;A0A0A0MSL8;B8ZZ74;Q96PK6-3;Q96PK6-4 RBM14;RBM14-RBM4 RNA-binding protein 14 no no 0 0 0 4 0 1 48.331 48.371 2 0.0024859 13226 20230619_1883_Aki_TMTPro18x_K_F4 125.96 68.859 189530 141710 168180 177430 199850 209780 203860 207120 237860 207300 206390 204760 236350 179080 192800 273510 273210 231980 175000 130080 173140 176680 205190 209630 206350 211740 239140 209460 214510 207300 238170 190610 201680 270750 260340 220930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 302250000 28970 1111 27217 54436 43938 43938 1 9606 Homo sapiens 0.013190054429401243 VIECNVR Unmodified 888.44874 0.44873627 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 4.5 0.5 1 1 37.371 37.44 2 0.006075 8503 20230619_1883_Aki_TMTPro18x_K_F4 135.87 95.762 97524 52218 100440 103940 138860 138870 114340 125710 130360 120190 139480 145080 146640 123760 130800 86132 173430 143980 90005 48299 102360 101080 140430 137410 117250 129140 132270 122530 143020 145300 148700 126470 135360 90565 165320 136250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192070000 28971 2980 27218 54437;54438 43939 43939 1 9606 Homo sapiens 4.985331509033131E-05 VIECSYTSADGQR Unmodified 1484.6566 0.6565568 338 Q9UBM7;A0A804HJQ7;A8K0D2;A0A1Y1B909;X5DNI9;A0A024R5F7;A0A804HI25;A0A8I5KRR9;E9PM00;B4E1K5;A0A1Y1BG54;A0A1Y1BBN3;H0YE57 DHCR7 7-dehydrocholesterol reductase yes no 0 0 0 3.5 0.5 1 1 42.187 42.24 2 1.87E-27 10501 20230619_1883_Aki_TMTPro18x_K_F4 248.88 231.94 34353 27996 34185 36652 30008 27847 31729 30824 37069 43323 43482 35552 56144 38313 29911 56880 53603 38746 31763 25702 34680 36190 31511 28916 32078 31633 37762 42874 44773 36599 55607 40434 32327 55765 50955 37048 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125210000 28972 338 27219 54439;54440 43940 43940 1 9606 Homo sapiens -0.0663852205261719 VIEDNEYTAR Unmodified 1208.5673 0.56733108 2023;3404 A8K379;P07948;B4DQ79;A8K4G3;H0Y3C5;J3KPD6;P08631-3;P08631-2;P08631-4;P08631;Q6NUK7;P07948-2 LYN;HCK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lyn;Tyrosine-protein kinase HCK no no 0 0 0 1.5 0.5 1 1 41.816 41.854 2 2.4624E-05 10901 20230619_1880_Aki_TMTPro18x_K_F1 158.08 133.3 102180 70720 99228 110090 105960 138240 92913 105830 133590 85979 124310 133940 93874 107040 112490 103180 156920 131040 94373 65099 101220 108220 109440 136790 95758 109830 133190 89528 126720 132880 97913 110970 116450 105350 149540 124270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237150000 28973 2023;3404 27220 54441;54442 43941 43941 1 9606 Homo sapiens -0.028609889498056873 VIEDRDSQLR Unmodified 1229.6364 0.6364137 4222 Q8N1F7;A8K897;Q8N1F7-2 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 1 2.5 0.5 1 1 35.662 35.719 3 8.3131E-05 7935 20230619_1881_Aki_TMTPro18x_K_F2 137.01 101.74 178380 140910 166340 176430 240100 199190 201210 201040 233710 192350 214820 188380 213670 174140 207860 204650 238830 180030 164820 129320 171060 175570 242060 199910 206110 205000 235440 194820 221080 191080 217820 181710 213130 203830 227800 171470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 191840000 28974 4222 27221 54443;54444 43942;43943 43942 2 9606 Homo sapiens 0.030780950697590015 VIEDVAFACALTSSVPTTK Unmodified 2008.0187 0.018693117 1003 Q59GQ7;A0A0C4DGA6;Q14527-2;Q14527;A8K5B6;Q05DF7 HLTF Helicase-like transcription factor yes no 0 0 0 8 0 1 63.971 63.994 3 2.1173E-07 19531 20230619_1888_Aki_TMTPro18x_K_F8 110.37 92.449 47933 46544 48301 50357 42854 48611 46109 41751 47963 61230 62014 61670 68702 55156 60553 78853 70329 73202 44377 42625 48962 50535 45036 49157 46387 43676 49384 60835 63255 62395 69500 58372 62361 78483 67215 69577 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 244460000 28975 1003 27222 54445 43944 43944 1 9606 Homo sapiens 0.05500451786610938 VIEEEWQQVDR Unmodified 1429.6838 0.68375782 3578 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 0 0 0 1.33 0.471 2 1 54.982 54.993 2;3 1.4464E-08 16613 20230619_1881_Aki_TMTPro18x_K_F2 206.73 179.63 175740 150390 158650 181610 165430 201740 194420 187360 216690 209410 211250 211110 241570 200890 218730 234340 225470 237480 162420 137920 162860 181090 172270 202110 195020 193010 219310 210550 218350 213930 244470 209370 223280 235100 215750 225480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 457390000 28976 3578 27223 54446;54447;54448 43945;43946 43946 2 9606 Homo sapiens -0.01389670449930236 VIEEQLEPAVEK Unmodified 1382.7293 0.72931103 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;A0A804HJI0;A0A804HJA1;A0A804HKK7;H7C3W8 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 2.25 0.829 1 1 2 54.335 54.365 2;3 5.3693E-13 16310 20230619_1881_Aki_TMTPro18x_K_F2 244 187.44 268970 242880 266590 279170 263690 316670 284360 310960 391230 383370 420290 475790 422490 409790 339810 474830 470610 502700 248850 222600 271070 279520 275080 317230 288940 319940 393650 386400 430170 476460 427660 428060 354980 477280 449230 477060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 257270000 28977 1723 27224 54449;54450;54451;54452 43947;43948 43947 2 9606 Homo sapiens 0.05325555012427685 VIEFAAK Unmodified 776.44324 0.44324019 4409 Q9BPX3;Q6NUR1;D6RA93 NCAPG Condensin complex subunit 3 yes no 0 0 0 8 0 1 53.06 53.134 2 0.0092557 14923 20230619_1888_Aki_TMTPro18x_K_F8 119.57 54.789 257630 211850 234210 251920 243010 285790 274090 251540 308600 300900 336330 313210 334950 255120 270410 370830 348540 327190 238050 194290 240140 251560 252770 285640 275610 260740 313490 301870 343470 315670 338680 271260 280980 368030 332580 311310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57289000 28978 4409 27225 54453 43949 43949 1 9606 Homo sapiens 0.04607629811323477 VIEGLDTGLQGMCVGER Oxidation (M) 1848.871 0.87098302 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;Q6ZME7;H0Y827;Q96AY3-2 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 1 0 4 0 1 55.084 55.096 3 8.5568E-05 16274 20230619_1883_Aki_TMTPro18x_K_F4 90.334 82.029 127140 113790 131400 147220 131960 157790 150030 146840 140700 141740 152060 125940 124390 100320 159080 107040 99554 87117 117660 104420 133250 146030 137530 158460 149970 150650 144310 143010 154180 127720 129340 104690 157580 106550 95742 83001 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48748000 28979 167 27226 54454 43950 43950 109 1 9606 Homo sapiens -0.019497630190471682 VIEGLDTGLQGMCVGER Unmodified 1832.8761 0.8760684 167 A0A024R1W3;Q96AY3;Q658U4;B4DJJ5;Q8NAG5;Q6ZME7;H0Y827;Q96AY3-2 FKBP10;DKFZp666D193 Peptidyl-prolyl cis-trans isomerase FKBP10 yes no 0 0 0 4.5 0.5 1 1 61.169 61.196 3 3.5595E-14 18428 20230619_1885_Aki_TMTPro18x_K_F5 126.46 116.71 83646 74679 64251 65810 75507 77973 78748 116570 108220 94018 91113 133520 134310 111340 104910 126100 121440 156500 77241 68298 67053 67473 77686 78861 80191 115670 107920 97377 96448 132910 134310 116400 108230 128110 116280 148190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223770000 28980 167 27226 54455;54456 43951 43951 1 9606 Homo sapiens -0.007054591564383372 VIELFSVCTNEDPK Unmodified 1649.7971 0.79707302 4376 V9HWH0;Q96KB5;Q96KB5-2 HEL164;PBK Lymphokine-activated killer T-cell-originated protein kinase yes no 0 0 0 5 0.816 1 1 1 62.729 62.764 3 0.07358 19376 20230619_1886_Aki_TMTPro18x_K_F6 39.424 27.279 92236 73566 87587 83728 77539 77522 69424 76832 136870 107580 87371 111660 110520 101430 81090 90316 62397 153110 85239 67449 89148 83686 81216 78905 72575 79361 133640 107290 93091 112630 110690 104470 82030 94412 60509 144430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 327750000 28981 4376 27227 54457;54458;54459 43952 43952 1 9606 Homo sapiens -0.0018336311902658053 VIEPFSR Unmodified 846.45995 0.45995289 3207 O00231;O00231-2 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 6.5 0.5 1 1 48.144 48.227 2 0.0085955 12752 20230619_1887_Aki_TMTPro18x_K_F7 120.45 80.002 380380 326640 321530 384500 361230 399500 405670 411560 469100 441750 418670 393720 452090 373050 399920 493610 432120 417460 351380 299490 332520 383760 373470 403170 408360 420390 472370 443420 433210 401410 457840 391860 409880 489580 413040 397360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 263930000 28982 3207 27228 54460;54461 43953 43953 1 9606 Homo sapiens 0.030581306972862876 VIEPGCVR Unmodified 928.48004 0.4800364 409 A0A024R6S1;O60884 DNAJA2 DnaJ homolog subfamily A member 2 yes no 0 0 0 4.5 0.5 1 1 40.587 40.652 2 0.0015418 9777 20230619_1885_Aki_TMTPro18x_K_F5 140.98 86.456 428040 365130 394690 423650 438630 463840 449650 449040 534700 490530 498460 514450 564780 444040 409750 597890 629580 519630 395650 334750 404520 423640 452450 465790 455380 460880 538520 494330 515940 518950 566970 468520 432510 593420 599490 494780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 622050000 28983 409 27229 54462;54463 43954;43955 43955 2 9606 Homo sapiens 0.012935583655917071 VIEPQYFGLAYLFR Unmodified 1714.9083 0.90827845 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;A0A804HJI0;A0A804HJA1;A0A804HKK7;H7C3W8 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 5 0 1 65.891 65.934 2 1.05E-15 20535 20230619_1885_Aki_TMTPro18x_K_F5 194.48 169.1 48666 33700 41162 39153 31376 47927 40058 35120 69271 18810 13877 19318 17449 15886 42403 16924 17395 15779 44899 30922 42291 39212 33784 47472 40743 36355 66540 20024 17085 19458 18894 16547 41156 17013 16874 15005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33735000 28984 1723 27230 54464 43956 43956 1 9606 Homo sapiens 0.07942064371218294 VIEQLLVGLK Unmodified 1110.7012 0.70124579 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HJ57;A0A804HKT8;A0A804HJ32;A0A804HI02;B4DE53;I6L959;Q9BTW9-5;A0A804HIC0;A0A804HL21;A0A804HKB9 TBCD Tubulin-specific chaperone D yes no 0 0 0 3 0 1 65.017 65.05 3 0.0071995 20549 20230619_1882_Aki_TMTPro18x_K_F3 79.693 58.791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28985 1722 27231 54465 43957 43957 1 9606 Homo sapiens 0.15032321613716704 VIEQPIR Unmodified 853.50215 0.50215205 108 B7Z6F7;A0A024R0R6;Q92797;A0A087WUE9;Q4LE61 SYMPK;SYMPK variant protein Symplekin yes no 0 0 0 5 0 1 41.205 41.29 2 0.023185 10069 20230619_1885_Aki_TMTPro18x_K_F5 90.777 32.965 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28986 108 27232 54466 43958 43958 1 9606 Homo sapiens 0.0695410610566114 VIFGLFGK Unmodified 879.52182 0.52182486 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45;A0A7P0T7U3 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 0 0 6.5 0.5 1 1 64.015 64.053 2 0.003934 19678 20230619_1887_Aki_TMTPro18x_K_F7 132.94 76.431 3311000 2752500 2972200 3072100 2719600 3354300 3356000 3480300 3565500 3413500 3520200 3316000 3424400 3068700 3460100 3675100 3751500 3973700 3059300 2522800 3044800 3081400 2865300 3373100 3354300 3544400 3618200 3450300 3609000 3363900 3501100 3205800 3535200 3699500 3588200 3770200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2181700000 28987 1716 27233 54467;54468 43959;43960 43960 2 9606 Homo sapiens 0.07724482116418585 VIFLENYR Unmodified 1052.5655 0.56548059 3432;1055;2254 B4DRW6;B2RB32;A0A0M4FEM1;P11217;P11217-2;B4DRQ4;Q59GM9;P11216;B4DSD8;H0Y4Z6;Q8TDG6;E9PK47;B2R825;P06737-2;P06737 PYGM;PYGB;PYGL Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, muscle form;Glycogen phosphorylase, brain form;Glycogen phosphorylase, liver form no no 0 0 0 3.67 3.09 1 1 1 57.997 58.018 2 0.0010192 17680 20230619_1880_Aki_TMTPro18x_K_F1 150.84 119.55 433260 388290 425950 434890 409530 486850 476750 472830 487240 392930 419520 358530 375630 327120 527870 441890 444780 365530 400810 355800 433170 436210 428690 488030 477180 481880 492730 400480 431670 364940 392030 344410 529010 438250 425820 348280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 326850000 28988 1055;3432;2254 27234 54469;54470;54471 43961;43962 43961 2 9606 Homo sapiens 0.04130046822865552 VIFPAPTPK Unmodified 968.5695 0.56950333 87 Q2TB59;A0A024R0C3;Q13423;A0A590UJM2;A0A590UK29;E9PCX7;A0A590UK15;A0A590UJI3 NNT NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 54.815 54.844 3 0.00019645 16266 20230619_1882_Aki_TMTPro18x_K_F3 112.84 74.756 36637 38310 46910 49284 42038 50093 58533 57102 57888 54504 52453 55775 59051 50667 52422 59309 48745 54728 34015 35134 46758 48888 44472 50737 58037 57784 58791 55254 54391 56389 59739 52880 53261 59192 46716 52008 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99193000 28989 87 27235 54472;54473 43963 43963 1 9606 Homo sapiens 0.08396136316605407 VIGELVGHTER Unmodified 1208.6513 0.65133548 2710 Q8TEQ6;B7ZLC9;Q58EZ8 GEMIN5 Gem-associated protein 5 yes no 0 0 0 5 0 1 46.683 46.759 3 3.1821E-18 12355 20230619_1885_Aki_TMTPro18x_K_F5 209.97 165.62 45787 35979 39156 47559 44994 47731 47667 45036 61209 54592 56708 48517 57545 43709 55618 66190 59541 57909 42277 33038 40464 47063 46368 48195 48311 46463 61397 54498 58376 49425 58584 46453 56866 65654 56919 55096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150910000 28990 2710 27236 54474 43964 43964 1 9606 Homo sapiens 0.05535586937753578 VIGGDDLSTLTGK Unmodified 1274.6718 0.67179615 1184 Q6LET3;A0A140VJL3;P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase yes no 0 0 0 7 0 1 58.847 58.896 2 2.2508E-21 17341 20230619_1887_Aki_TMTPro18x_K_F7 279.64 224.07 96572 83561 80701 91825 66918 74433 79774 87665 88233 118460 111870 117410 127440 99674 115700 151590 128100 143030 89208 76566 83148 91870 70996 76935 80027 89467 90503 117950 114390 118670 128960 106180 118750 150900 122540 135890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101870000 28991 1184 27237 54475 43965 43965 1 9606 Homo sapiens 0.04544712806887219 VIGGLEK Unmodified 714.42759 0.42759012 1777 D3DUJ0;A0A8I5KVV1;Q8TA92;Q9Y4W6;A0A8I5QJR7 AFG3L2 AFG3-like protein 2 yes no 0 0 0 7.5 0.5 1 1 51.331 51.408 3 0.077644 14108 20230619_1888_Aki_TMTPro18x_K_F8 45.312 0 76672 60843 65638 72719 93439 91822 84363 82785 107870 99710 105780 99850 120780 89473 87724 111120 114510 98767 70799 55811 68044 72709 94588 91233 86290 85633 108500 99903 109200 101040 121150 93825 91385 110570 109200 93998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67769000 28992 1777 27238 54476;54477 43966 43966 1 9606 Homo sapiens 0.0589534329427579 VIGHYAGEDATDAFR Unmodified 1620.7532 0.75323437 3363 O95864-3;O95864 FADS2 Fatty acid desaturase 2 yes no 0 0 0 4.5 0.5 1 1 47.254 47.313 3 3.4231E-42 12736 20230619_1883_Aki_TMTPro18x_K_F4 219.97 208.06 108100 92176 116780 109390 97904 111980 119260 111390 136060 127760 134220 118840 152950 117490 111740 151330 145340 134670 100050 84524 117580 109140 103780 113030 119560 114300 137570 128010 138460 121120 153490 123080 116420 150480 138670 128130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 372640000 28993 3363 27239 54478;54479 43967;43968 43967 2 9606 Homo sapiens -0.03231211501156395 VIGIDHIK Unmodified 893.53345 0.53345218 1398 B7Z972;A0A384MDK7;A0A3F2YNX8;P22061;P22061-2;F6S8N6;C9J0F2 PCMT1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 5.33 3.09 1 1 1 46.953 47.021 3 3.6772E-06 13144 20230619_1880_Aki_TMTPro18x_K_F1 150.4 91.759 938160 691180 924300 1002000 987550 1116600 1112200 977620 1231500 1252000 1311000 1214500 1298300 1118900 1118400 1447000 1356000 1352200 866840 635520 941640 987390 1024300 1116900 1117600 1016100 1251200 1249700 1339900 1232000 1317200 1174500 1155400 1442500 1295000 1285300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 585170000 28994 1398 27240 54480;54481;54482 43969;43970;43971 43969 3 9606 Homo sapiens 0.08242679139766551 VIGIECSSISDYAVK Unmodified 1639.8127 0.81272309 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3Q8APX7;A0A3S6H7Z6;A0A3Q8AIR8;A0A3S6H7Y4;A0A3Q8B027;B4DJ87;E9PIX6;A0A3Q8BCI7;E9PQ98;A0A3S6H824;A0A3S6H942;Q99873-5;A0A3S6H7K8;E9PNR9;A0A3Q8AIS5;H0YDE4;A0A3Q8B4N0;A0A3Q8B9M1;A0A3S6H758;A0A3Q8AX95;E9PMW9;A0A3Q8B032;A0A3S6H8V5 PRMT1 Protein arginine N-methyltransferase 1 yes no 0 0 0 7 0.816 1 1 1 60.209 60.25 3 1.8515E-08 17890 20230619_1887_Aki_TMTPro18x_K_F7 142.85 116.42 138480 94064 123860 149020 102590 124660 124550 131550 155500 176850 136010 170100 216560 170820 117720 281210 225920 261420 127800 86614 126870 145570 109010 127980 125310 135160 156150 176090 144110 173110 213830 182080 128340 279140 215360 248380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 428620000 28995 1536 27241 54483;54484;54485 43972;43973 43973 2 9606 Homo sapiens 0.018409233980037243 VIGLSSDLQQVGGASAR Unmodified 1656.8795 0.87949752 2403 B4DMT5;H0YDT6;B3KSH1;O00303;B4DEW9 EIF3F Eukaryotic translation initiation factor 3 subunit F yes no 0 0 0 4.5 3.5 1 1 55.291 55.322 3 3.061E-38 15836 20230619_1888_Aki_TMTPro18x_K_F8 195.23 153.59 148920 134250 137790 147580 113560 142720 154810 138380 170840 153690 172290 156290 185540 172520 170260 167110 166840 192580 137700 122990 140620 147940 121140 144610 154190 142170 173100 154670 177180 159170 188290 177120 173200 169480 159840 182550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1089400000 28996 2403 27242 54486;54487 43974;43975 43975 2 9606 Homo sapiens 0.0773329500411819 VIGMGVPHSK Oxidation (M) 1039.5485 0.54845032 2622 B7Z6C8;E7EVY2;B4DY98;Q96AG3-2;Q96AG3 SLC25A46 Solute carrier family 25 member 46 yes no 0 1 0 2 0 1 39.094 39.16 3 0.026992 9430 20230619_1881_Aki_TMTPro18x_K_F2 52.49 36.265 75102 56066 75409 77632 89314 95489 94574 90760 108200 87242 106130 120200 95715 88710 94078 96200 118130 117970 69409 51521 76807 76848 91792 95079 95455 92969 109270 89382 108630 119410 98017 92912 97030 97770 112790 111810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40214000 28997 2622 27243 54488 43976 43976 1575 1 9606 Homo sapiens 0.030258029454444113 VIGMHYFSPVDK Oxidation (M) 1407.6857 0.68567208 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 1 0 1.5 0.5 1 1 49.477 49.507 3 1.0549E-05 14143 20230619_1880_Aki_TMTPro18x_K_F1 131.17 98.734 112150 98544 109340 111660 149690 140740 161940 156960 148970 125870 136800 131930 129210 109740 144150 153170 145400 154410 103730 90315 111930 112130 152350 140550 162110 158360 151950 129050 140640 133020 132830 116230 146450 153250 139170 146620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 253440000 28998 2908 27244 54489;54490 43977 43977 1731 1 9606 Homo sapiens -0.0018633296565440105 VIGMHYFSPVDK Unmodified 1391.6908 0.69075746 2908 E9KL44;H0YFD6;P40939;B4DRH6;B4DDZ5;A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes no 0 0 0 1.5 0.5 1 1 53.945 53.959 3 1.0282E-05 16203 20230619_1881_Aki_TMTPro18x_K_F2 134.99 93.449 175700 145940 168020 173580 169570 219610 221820 221790 224710 218240 204130 197510 212200 187860 226480 244520 215620 231050 162420 133840 171460 173670 177630 218530 220680 226250 227970 220110 210810 201230 217040 197080 229560 244010 206520 219540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 708010000 28999 2908 27244 54491;54492 43978 43978 1 9606 Homo sapiens 0.0105797089695443 VIGQDSSEIHFK Unmodified 1358.683 0.68302954 276 A0A5P8PBC0;A0A024R3Z2;B8ZZN6;P63165;B8ZZJ0;B9A032;G2XKQ0 SUMO1 Small ubiquitin-related modifier 1;Small ubiquitin-related modifier yes no 0 0 0 6 0 1 48.86 48.938 4 0.038452 13454 20230619_1886_Aki_TMTPro18x_K_F6 55.452 37.721 37429 33631 37776 35322 34552 45670 37763 39153 44338 34012 31225 38026 39038 28714 32959 34241 34503 39190 34633 30799 38289 35688 36298 45239 38102 40306 44262 34789 33042 38079 39280 30245 33715 34594 33030 37153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9131700 29000 276 27245 54493 43979 43979 1 9606 Homo sapiens 0.018035349010233404 VIGSGCNLDSAR Unmodified 1247.5928 0.59283433 1577;3370 P07195;Q5U077;A0A5F9ZHM4;A0A3B3IS95;A8MW50;F5H155;F5H5G7;Q96L19;Q6ZMR3;F5H245;D6NKH9;A0A140VKA7;G9BCY7;G9BCY8;P07864;G3XAP5;V9HWB9;P00338;P00338-3;B4DJI1;P00338-4;P00338-5;P00338-2 LDHB;LDHC;LDHAL6A;HEL-S-133P;LDHA L-lactate dehydrogenase B chain;L-lactate dehydrogenase;L-lactate dehydrogenase A-like 6A;L-lactate dehydrogenase C chain;L-lactate dehydrogenase A chain no no 0 0 0 6.5 1.12 1 1 1 1 41.851 41.913 2 1.476E-23 10273 20230619_1885_Aki_TMTPro18x_K_F5 247.31 189.45 586890 456690 484410 453480 570100 968580 524240 512870 1100500 465940 465280 469070 509970 443590 474010 638430 605770 485990 541730 418260 502080 464850 588430 929100 548370 553860 1061200 475570 509020 475670 517970 468410 490780 629430 577500 463650 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 9928100000 29001 1577;3370 27246 54494;54495;54496;54497 43980;43981;43982;43983;43984 43980 5 9606 Homo sapiens -0.021058376990367833 VIGVLEPLDPEDYTK Unmodified 1686.8716 0.87161817 2867;2868 E5KND5;Q96RP9;Q96RP9-2;C9IZ01;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 0 4 0 1 63.621 63.629 3 5.2205E-08 19859 20230619_1883_Aki_TMTPro18x_K_F4 137.68 115.92 11688 9854 11502 11025 9845.9 13752 11746 11081 17578 16438 15673 18146 19427 18069 14453 20971 17658 23695 10809 9031.3 11675 11077 10444 13635 11913 11649 17505 16389 16344 18336 19486 18792 15000 21158 16906 22454 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89070000 29002 2867;2868 27247 54498 43985 43985 1 9606 Homo sapiens 0.055657229639791694 VIHALSENELCVR Unmodified 1538.7875 0.78751139 3295 O75165;B3KN02 DNAJC13 DnaJ homolog subfamily C member 13 yes no 0 0 0 6.5 0.5 1 1 48.574 48.656 3 8.8887E-16 13385 20230619_1886_Aki_TMTPro18x_K_F6 207.12 170.6 68161 46604 68819 71073 67027 84756 76087 82828 100480 83343 87293 101300 96213 82486 76786 95106 107550 103010 62967 42891 69856 69920 70128 84557 76960 84742 100410 84773 90643 101350 97034 86370 80217 95761 102570 97773 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170550000 29003 3295 27248 54499;54500 43986 43986 1 9606 Homo sapiens 0.039669133860797956 VIHELANER Unmodified 1079.5724 0.57235688 1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 0 0 0 3.5 0.5 1 1 38.3 38.348 3 3.2387E-05 8912 20230619_1882_Aki_TMTPro18x_K_F3 153.24 120.92 79591 60173 77358 78038 85702 81135 82007 81769 93504 74819 111640 93430 88770 76255 77196 85174 98606 91700 73543 55253 78875 77391 88168 81855 83291 83327 95195 76575 112540 93519 90784 79688 79926 85798 94091 87053 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 83026000 29004 1843 27249 54501;54502 43987;43988 43987 2 9606 Homo sapiens 0.035753597034727136 VIHEQVNHR Unmodified 1130.5945 0.59448931 3433 P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 5 0 1 23.165 23.232 3 2.5503E-12 3843 20230619_1885_Aki_TMTPro18x_K_F5 200.05 180.26 47732 21897 50112 46732 50357 57167 47949 52025 68423 50082 66554 62760 62465 45724 46981 34517 55736 45548 44033 20296 50686 45254 52267 56845 49145 53443 68386 51135 68132 62526 63089 47175 48452 35541 53172 43182 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76074000 29005 3433 27250 54503 43989 43989 1 9606 Homo sapiens 0.03441584171878276 VIHLVER Unmodified 864.51814 0.51813647 731 P46379-3;P46379;P46379-2;A0A7I2V508;A0A0G2JK23;A0A024RCR6;A0A1U9X7A6;A0A1U9X7A9;A0A7P0MQS5;P46379-5;A0A0G2JL47;P46379-4;X6REW1;A0A0G2JJM1;F6S6P2;F6TC96;F6WML8;F6X9W3;F6VEM6;F6U341;A0A1B0GX79;A0A0G2JJR8;A0A7I2V3H1;F6XTU0;F6U1F2;F6UR09 BAG6;BAT3 Large proline-rich protein BAG6 yes no 0 0 0 7 0 1 40.257 40.322 2 0.024502 9373 20230619_1887_Aki_TMTPro18x_K_F7 99.139 27.425 191740 150860 169010 177680 194280 209760 197010 204910 238340 216590 238970 226350 254950 210460 201430 259990 281820 253060 177080 138370 174000 177690 199950 209600 199790 209930 240460 218620 245700 228950 257190 220260 210520 259910 268670 240540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78578000 29006 731 27251 54504 43990;43991 43991 2 9606 Homo sapiens 0.08045812342561476 VIHSILNSPYAK Unmodified 1340.7452 0.74523587 3493 P23258;A0A1B4Z394;A0A7P0T9G6;Q9NRH3;K7EIS0;K7EKE5 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain;Tubulin gamma chain yes no 0 0 0 4.5 0.5 1 1 51.949 51.998 3 1.4275E-05 14927 20230619_1883_Aki_TMTPro18x_K_F4 130.56 84.404 258770 206320 242690 260620 245840 296380 302380 276290 322100 276230 279210 247700 289970 226160 280240 307080 291310 278250 239120 189360 248090 259190 256820 296440 302120 283700 325180 278410 288790 252250 295030 238370 285890 305590 278530 264640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 211890000 29007 3493 27252 54505;54506 43992;43993 43992 2 9606 Homo sapiens 0.08849306040019655 VIHVESGK Unmodified 867.48142 0.48141661 1348 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A994J4Z2;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;Q59FZ6;A0A2R8YF80;A0A2R8YGP5;A0A2R8Y7R0 SMARCA4 Transcription activator BRG1 yes no 0 0 0 6.5 0.5 1 1 38.244 38.314 3 0.00086943 8845 20230619_1886_Aki_TMTPro18x_K_F6 121.09 95.265 59395 28766 69930 72274 91349 89583 74251 81285 79020 61597 93951 97355 72507 72916 82898 32466 90344 92364 54861 26735 70477 69550 92611 89018 76055 83086 80728 64404 94795 96281 75239 73901 84237 36804 86383 87085 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99153000 29008 1348 27253 54507;54508 43994 43994 1 9606 Homo sapiens 0.04237515726003949 VIIIGSGVSGLAAAR Unmodified 1382.8245 0.82454882 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5KRX9;A0A8I5KT29;A0A8I5QJR3;A0A8I5KV76;A0A8I5KRF4;A0A8I5KSH0;A0A8I5KVZ4;A0A8I5KQU6;A0A8I5KRC9;A0A8I5KTR5;A0A8I5KPV0 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 0 5 0 1 59.279 59.333 3 1.5249E-10 17608 20230619_1885_Aki_TMTPro18x_K_F5 151.08 120 17721 17752 20735 21374 17752 22589 23672 25841 30455 17674 20849 16487 22849 18748 20106 21076 18591 20235 16432 16272 20779 21312 18857 22814 23734 25948 30207 18288 21899 16902 23122 19393 20416 21094 17814 19222 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49906000 29009 1785 27254 54509 43995 43995 1 9606 Homo sapiens 0.1484495299421269 VIILGDSGVGK Unmodified 1056.6179 0.61791009 1257 A0A158RFU6;P51149;A0A6Q8PG52;A0A6Q8PH84;C9J8S3;B4DPH9;C9J592;C9J4V0;C9IZZ0;C9J4S4;C9J7D1 RAB7A Ras-related protein Rab-7a yes no 0 0 0 4.5 3.04 1 1 1 1 56.533 56.566 2;3 1.3043E-08 16368 20230619_1888_Aki_TMTPro18x_K_F8 223.93 130.5 398960 327630 339720 394090 329020 379380 375420 364480 407880 473990 441510 452530 515390 428190 456390 542840 467800 511840 368460 300510 350200 392320 344130 384450 376920 376410 415500 472430 454740 459580 520760 448590 466250 541680 447790 486310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 958270000 29010 1257 27255 54510;54511;54512;54513 43996;43997 43997 2 9606 Homo sapiens 0.09186585165844008 VIISAPSADAPMFVMGVNHEK Oxidation (M) 2228.097 0.096960213 3382 V9HVZ4;P04406;P04406-2;E7EUT5;Q0QET7;A4UCT1;B4DRV9 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 1 0 5 3.29 2 1 2 57.619 57.646 3;4 3.954E-18 16761 20230619_1888_Aki_TMTPro18x_K_F8 169.62 156.2 474490 449720 509150 497960 485410 596660 566420 502200 590750 612530 589280 661780 678190 562790 734880 656010 605890 774570 439450 411970 514020 500370 508550 593700 567150 522720 600730 614680 609390 665900 691760 588990 738780 664600 582130 733820 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 3109199999.9999995 29011 3382 27256 54514;54515;54516;54517;54518 43998;43999;44000;44001;44002;44003 44002 1989;1990 6 9606 Homo sapiens 0.032035611001902 VIISAPSADAPMFVMGVNHEK Unmodified 2212.102 0.10204559 3382 V9HVZ4;P04406;P04406-2;E7EUT5;Q0QET7;A4UCT1;B4DRV9 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 3.67 3.09 1 1 1 61.17 61.184 3;4 2.502E-38 18919 20230619_1880_Aki_TMTPro18x_K_F1 242.26 231.4 337100 322710 382410 324590 259910 383920 387000 324910 418880 450140 375920 480980 530600 446230 560870 455330 462440 609870 312380 295370 382660 328730 283690 382330 383820 339530 423620 449240 395490 485120 537920 462240 563800 466400 444430 577080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2771500000 29012 3382 27256 54519;54520;54521 44004;44005 44004 2 9606 Homo sapiens 0.044478649627762934 VIISAPSADAPMFVMGVNHEK 2 Oxidation (M) 2244.0919 0.091874835 3382 V9HVZ4;P04406;P04406-2;E7EUT5;Q0QET7;A4UCT1;B4DRV9 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 2 0 7 0 1 54.336 54.399 4 9.9158E-23 15430 20230619_1887_Aki_TMTPro18x_K_F7 172.5 159.07 65962 67125 71992 77453 89804 78673 84977 76550 86973 80616 94710 84281 90685 79301 114510 87734 83565 109460 61132 61500 72909 77401 91544 79491 86016 78499 88783 81386 96628 85278 93783 82444 114180 89327 80433 103640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 491770000 29013 3382 27256 54522 44006 44006 1989;1990 1 9606 Homo sapiens 0.019592572375586315 VIITNFPAAK Unmodified 1072.6281 0.62808085 2024;1277 A0A1B0GVU9;Q9H3A5;Q9BUZ3;B4DDN1;Q96AW5;H7C0R3;Q53HS0;A8K3A8;P47897-2;P47897;B4DNN3 QARS Glutamine--tRNA ligase no no 0 0 0 4 0 1 57.073 57.078 3 0.0016328 17076 20230619_1883_Aki_TMTPro18x_K_F4 88.496 67.718 43944 37769 41298 39333 44257 52561 49837 48072 54414 52948 50214 42143 49191 43726 50136 56704 50157 50139 40626 34592 42214 39792 45920 52048 50062 49532 55018 52935 51629 43370 50297 45733 51004 56389 47990 47692 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85574000 29014 1277;2024 27257 54523 44007 44007 1 9606 Homo sapiens 0.09467192891065679 VIIYQEK Unmodified 891.50657 0.50656873 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 0 0 7.5 0.5 1 1 49.224 49.308 2 0.00012779 13266 20230619_1888_Aki_TMTPro18x_K_F8 143.23 96.161 642530 479310 525970 616560 666000 773470 680990 669270 835180 732070 796250 701680 778560 632460 647220 846520 807630 683640 592910 440110 546730 613200 681920 767670 690340 692520 840260 735920 817160 712000 788890 665900 670370 837590 770330 651500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 511620000 29015 1044 27258 54524;54525 44008;44009 44009 2 9606 Homo sapiens 0.05647570528560664 VILASNR Unmodified 771.46029 0.46028724 1833 P61619;A0A8V8TMZ5;B4DR61;B3KNF6;C9JXC6;A0A8V8TMZ3;A0A8V8TN19;F8W776;Q8TC24;B3KQ68;Q9H9S3-2;Q9H9S3-3;Q9H9S3;A0A8V8TN25;A0A8V8TNG8;H7C1Q9;C9JJV4;A6NIF9;F2Z2C7;A6NK38;H7C069 SEC61A1;SEC61A2 Protein transport protein Sec61 subunit alpha isoform 1;Protein transport protein Sec61 subunit alpha isoform 2 yes no 0 0 0 1.5 0.5 1 1 39.607 39.642 2 0.021769 9674 20230619_1881_Aki_TMTPro18x_K_F2 102.8 52.494 213680 165660 173890 186230 255770 262240 232190 249840 369140 118310 136930 149090 115810 101150 154480 125320 162180 127500 197210 151890 181240 187430 258780 259160 239470 252480 358200 128020 150610 148400 120870 107150 156660 125780 154860 121200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295560000 29016 1833 27259 54526;54527 44010 44010 1 9606 Homo sapiens 0.06541550417136932 VILDEGHAIR Unmodified 1121.6193 0.61930707 1003 Q59GQ7;A0A0C4DGA6;Q14527-2;Q14527;A8K5B6;H7C5K0 HLTF Helicase-like transcription factor yes no 0 0 0 4 0.816 1 1 1 42.001 42.064 3 7.245E-10 10441 20230619_1883_Aki_TMTPro18x_K_F4 197.27 143.2 91790 68057 82461 105000 79688 107020 95450 82591 99255 104350 115260 106310 102060 84960 111350 122640 118530 122570 84754 62622 84663 102920 83578 107420 95440 86726 101530 104360 116900 107180 105020 90346 113530 122580 113360 116400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 247630000 29017 1003 27260 54528;54529;54530 44011 44011 1 9606 Homo sapiens 0.06336219254603748 VILDLEEER Unmodified 1114.587 0.58700389 4647 Q9P2B4;B1AMN7 CTTNBP2NL CTTNBP2 N-terminal-like protein yes no 0 0 0 1 0 1 56.395 56.395 2 0.014975 16986 20230619_1880_Aki_TMTPro18x_K_F1 84.213 25.536 46054 39410 45756 43372 42242 47935 46582 46566 57236 62313 60730 60318 64224 52447 58283 68303 68696 69570 42595 36112 46437 43562 44297 48109 47063 48081 57882 62064 62292 61060 65149 55217 60001 68421 65633 66061 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13972000 29018 4647 27261 54531 44012 44012 1 9606 Homo sapiens 0.034293870609417354 VILDLTPNYR Unmodified 1202.6659 0.66592292 1704 P08195-4;P08195-5;P08195;P08195-3;A0A7P0Z4P5;A0A7P0TAN7;A0A7P0Z4A0;A0A7P0T9F7;F5GZS6;P08195-2;A0A7P0TBF8;B4E2Z3;F5H056;F5GZI0;A0A7P0TAS6;A0A024R599;A0A7P0T8U7;A0A7P0T8F1;H0YH36 SLC3A2 4F2 cell-surface antigen heavy chain yes no 0 0 0 1 0 1 58.698 58.698 2 0.045965 17963 20230619_1880_Aki_TMTPro18x_K_F1 83.623 63.987 215070 167670 172120 188380 158610 177740 178730 177530 201750 269590 219300 282160 270100 237880 265520 290840 287090 339820 198480 153730 178300 188460 166520 180620 179830 183880 205380 267770 226900 284070 273920 249690 271420 294060 274850 322050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 702500000 29019 1704 27262 54532 44013 44013 1 9606 Homo sapiens 0.07269659085864077 VILDYNTAHNK Unmodified 1286.6619 0.66190017 3885 Q59GW5;Q14258;D3DTY9 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes no 0 0 0 8 0 1 45.089 45.117 3 2.3524E-09 11523 20230619_1888_Aki_TMTPro18x_K_F8 185.3 145.43 80111 70254 82414 95773 149210 157330 143950 125720 142780 94861 117300 111620 125160 96130 110940 132980 129330 113490 74127 64508 84646 95357 149440 153670 145260 129800 144360 98147 121860 112180 126770 101620 114190 131890 123460 108060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 184970000 29020 3885 27263 54533 44014 44014 1 9606 Homo sapiens 0.030035695921924344 VILGGDHYFR Unmodified 1175.6087 0.60874239 1494 A0A384P5W4;Q15058 KIF14 Kinesin-like protein KIF14 yes no 0 0 0 1 0 1 48.082 48.082 3 1.6449E-07 13596 20230619_1880_Aki_TMTPro18x_K_F1 185.81 119.12 14042 14063 16540 16722 13454 18373 16546 14985 20679 18196 14723 11643 22708 15437 15645 16711 17419 14751 13022 12889 16553 16691 14329 18370 16630 15632 20604 18036 15709 12254 22562 15890 16134 16663 16630 14041 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36535000 29021 1494 27264 54534 44015 44015 1 9606 Homo sapiens 0.02796236600170232 VILGSEAAQQHPEEVR Unmodified 1761.901 0.90096124 2654 B4E357;Q5JPB8;Q53HL4;Q53GT4;G3V1D3;G3V180;Q9NY33-4;Q9NY33;E9PQ14;E9PNX5;E9PKK8;E9PPK9;Q9NY33-2 DKFZp686O1117;DPP3 Dipeptidyl peptidase 3 yes no 0 0 0 3.33 0.471 2 1 41.701 41.753 3 1.677E-14 10378 20230619_1882_Aki_TMTPro18x_K_F3 173.15 159.74 45731 39501 55207 57155 62517 60749 59290 60154 67574 60296 75607 68358 74418 55715 70111 51857 59387 64433 42374 36297 55404 56303 64185 61149 60246 61505 68660 61180 77094 68601 75699 57736 70677 52946 56959 61047 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 309460000 29022 2654 27265 54535;54536;54537 44016;44017 44016 2 9606 Homo sapiens 0.05048680032837183 VILHGEHAVVHGK Unmodified 1394.7783 0.77826733 2323 F5H8H2;B7Z301;B2RDU6;Q59ET9;Q03426;A0A8V8TMD0;F5H092;F5H163;F5H368;F5GXC0 MVK Mevalonate kinase yes no 0 0 0 8 0 1 36.099 36.086 5 4.0243E-06 7926 20230619_1888_Aki_TMTPro18x_K_F8 134.99 122.11 193560 164710 176910 186170 187090 183810 271830 262680 311860 230020 233290 224580 291460 219850 223990 263980 264910 251250 178890 150960 181360 186380 195650 187930 270210 261990 312040 234140 245500 228220 292280 229400 231420 263750 252970 238820 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 113860000 29023 2323 27266 54538 44018;44019;44020;44021 44020 4 9606 Homo sapiens 0.09666932882737456 VILITPTPLCETAWEEQCIIQGCK Unmodified 2858.4017 0.40165801 1185 A0A140VJL6;Q2TAA2;H7C5G1;Q6NVV8;Q05D21;Q2TAA2-2;Q6PCA9;C9JDY4;C9J5J2;C9JE02 IAH1 Isoamyl acetate-hydrolyzing esterase 1 homolog yes no 0 0 0 7.5 0.5 1 1 64.696 64.72 3 1.9105000000000002E-27 19840 20230619_1888_Aki_TMTPro18x_K_F8 193.22 184.13 21679 19758 22483 24945 14425 17524 19177 19990 19110 22205 21816 20536 26085 24462 25223 26202 24434 23089 20067 18125 22664 24670 15755 18340 19081 20323 19597 22268 22441 21069 26458 25184 25624 26131 23377 21968 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52433000 29024 1185 27267 54539;54540 44022 44022 1 9606 Homo sapiens 0.04679324671587892 VIMDYESLEK Oxidation (M) 1241.585 0.58495498 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;A0A8V8TL37;Q9P1G4 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 1 0 3 0 1 54.715 54.762 3 0.002015 16250 20230619_1882_Aki_TMTPro18x_K_F3 85.377 62.657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29025 3373 27268 54541 44023 44023 1974 1 9606 Homo sapiens -0.026174097391731266 VIMDYESLEK Unmodified 1225.59 0.59004036 3373 V9HWH6;Q8N7G1;P00491;G3V5M2;A0A8V8TL37;Q9P1G4 HEL-S-156an;PNP Purine nucleoside phosphorylase yes no 0 0 0 4.5 0.5 1 1 58.944 58.972 3 1.191E-05 17883 20230619_1883_Aki_TMTPro18x_K_F4 125.97 67.292 256710 228230 257850 248890 216890 247850 249480 256150 235960 327260 298450 294830 327910 294990 287930 353910 329730 345640 237510 209090 261160 249810 229380 250990 249460 262980 244120 325770 304560 300810 331940 307370 296170 354050 315190 328320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 457750000 29026 3373 27268 54542;54543 44024;44025 44024 2 9606 Homo sapiens -0.013731058765415582 VIMGEEVEPVGLMTGSGVVGVK Unmodified 2186.1327 0.13267702 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 7 0 1 63.346 63.379 3 1.937E-12 19368 20230619_1887_Aki_TMTPro18x_K_F7 136.49 119.24 78428 62963 70171 74508 67477 87056 74438 79307 73680 92640 86473 89854 105780 89785 90586 115100 110730 128060 72448 57747 71966 74467 70596 86877 74678 81888 75737 92799 88993 91374 106640 93994 93633 115900 105870 121430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133350000 29027 2980 27269 54544 44026 44026 1 9606 Homo sapiens 0.0870559855720785 VIMVGSGGVGK Oxidation (M) 1018.5481 0.54811597 3091 H7C3P7;P11233;F8WEQ6;C9JPE8;C9JYR1;C9J6B1;C9JQB3;A0A024RAG3;P11234;P11234-3;P11234-2 RALA;RALB Ras-related protein Ral-A;Ras-related protein Ral-B yes no 0 1 0 2 0 1 47.816 47.886 2 0.0018367 13462 20230619_1881_Aki_TMTPro18x_K_F2 109.44 69.171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29028 3091 27270 54545 44027 44027 1797 1 9606 Homo sapiens 0.03958383225619855 VIMVTGDHPITAK Unmodified 1380.7435 0.74352131 3387;959;3651 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z1Q9;B7Z3F8;B3KV59;B3KSY7;B3KNQ8;Q53FM3;A0A384MR29;Q658V6;P20648;B4E0R9;P05023;P05023-4;P05023-3;B7Z3V1;P05023-2;B3KRI1;B2RAQ4;P50993;B1AKY9;A0A0S2Z3W6;B7Z1N5;H0Y7C1;B3KX35;B3KW93;B4DIQ8;Q13733;P54707;P54707-2 ATP1A3;DKFZp666G172;ATP4A;ATP1A1;ATP1A2;ATP1A4;ATP12A Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Potassium-transporting ATPase alpha chain 2 no no 0 0 0 1 0 1 48.73 48.73 3 1.4316E-12 13839 20230619_1880_Aki_TMTPro18x_K_F1 166.6 141.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29029 959;3387;3651 27271 54546 44028 44028 1 9606 Homo sapiens 0.06837928959771489 VIMVTGDHPITAK Oxidation (M) 1396.7384 0.73843593 3387;959;3651 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z1Q9;B7Z3F8;B3KV59;B3KSY7;B3KNQ8;Q53FM3;A0A384MR29;Q658V6;P20648;B4E0R9;P05023;P05023-4;P05023-3;B7Z3V1;P05023-2;B3KRI1;B2RAQ4;P50993;B1AKY9;A0A0S2Z3W6;B7Z1N5;H0Y7C1;B3KX35;B3KW93;B4DIQ8;Q13733;P54707;P54707-2 ATP1A3;DKFZp666G172;ATP4A;ATP1A1;ATP1A2;ATP1A4;ATP12A Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Potassium-transporting ATPase alpha chain 2 no no 0 1 0 8 0 1 45.664 45.703 3 3.2001E-05 11748 20230619_1888_Aki_TMTPro18x_K_F8 113.8 100.39 82351 67139 68139 84402 102700 99840 100560 99710 116550 102670 107390 110110 101840 91584 104720 122870 105310 109040 76037 61611 71014 84001 103820 99813 101960 101940 117440 103840 110410 110850 104290 96683 106580 122150 100780 103700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117260000 29030 959;3387;3651 27271 54547 44029 44029 541 1 9606 Homo sapiens 0.055936250971399204 VINDKHDDVMAK Oxidation (M) 1399.6766 0.67656396 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 1 1 4.5 0.5 1 1 38.149 38.216 4 0.0093014 8780 20230619_1885_Aki_TMTPro18x_K_F5 78.287 57.972 107620 83739 92003 112490 126740 125690 130770 120470 141040 122740 139180 112260 122000 104310 125300 110010 123600 91304 99365 76912 95405 111370 128920 125990 131880 123520 142950 123650 141970 114250 125200 108140 127160 109490 118050 87037 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140260000 29031 832 27272 54548;54549 44030 44030 495 1 9606 Homo sapiens -0.00728726322017792 VINDKHDDVMAK Unmodified 1383.6816 0.68164933 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479;Q05BX4;A0A7I2V4X0 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 1 6 0 1 41.74 41.834 4 0.00011794 10264 20230619_1886_Aki_TMTPro18x_K_F6 117.92 82.798 117840 95092 116920 114560 140520 158640 140820 132390 166360 144110 147520 136620 160130 113070 136040 142710 144380 109200 108940 87228 119200 114680 144160 156460 142720 137350 167270 144850 152700 138270 161730 119040 139240 141070 137820 104200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190650000 29032 832 27272 54550 44031 44031 1 9606 Homo sapiens 0.005155775406137764 VINEEYK Unmodified 893.44945 0.44944778 2910;3814 E9PC52;Q6FHQ0;Q16576;Q16576-2;A8K6A2;C9JAJ9;E9PNS2;E9PIC4;E9PNS6;Q09028-3;Q09028-2;Q09028 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 no no 0 0 0 3.5 0.5 1 1 44.704 44.762 2 0.017966 11612 20230619_1883_Aki_TMTPro18x_K_F4 107.9 48.914 1343300 798710 1357500 1430700 1570000 1654100 1497400 1566400 1737600 1652800 2029700 2035000 2078800 1677000 1622200 1218200 2301000 1972200 1240100 737160 1381300 1394800 1611600 1652800 1522100 1608600 1767800 1677400 2070300 2034800 2098000 1718800 1692500 1275300 2192800 1866400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1246500000 29033 2910;3814 27273 54551;54552 44032;44033 44033 2 9606 Homo sapiens -0.0015389674781545182 VINEPTAAALAYGLDK Unmodified 1644.8723 0.87228688 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z1V7;H0Y8K0;Q2F839 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 7 0.707 1 2 1 62.003 62.041 2;3 0.0008311 18756 20230619_1887_Aki_TMTPro18x_K_F7 105.14 80.796 72675 68159 74754 63059 56033 87741 67564 72712 123790 92834 87265 77077 82773 97427 89942 109350 87470 91179 67278 62347 75438 64497 60311 86487 69199 75806 121370 92406 90985 79722 85166 100320 91311 108640 83740 86781 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7994899999.999999 29034 1488 27274 54553;54554;54555;54556 44034;44035 44035 2 9606 Homo sapiens 0.07564562403695163 VINIDFRDPEESK Unmodified 1560.7784 0.77838649 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 1 4.5 0.5 1 1 54.381 54.396 3 0.0013495 15962 20230619_1883_Aki_TMTPro18x_K_F4 85.45 50.7 154450 139010 150470 174380 151060 175630 188700 185870 206340 176340 195190 206370 215840 183250 188400 232910 215870 221850 142880 127520 153380 173210 157940 177710 188610 188960 208650 179680 201770 207450 218360 192370 193820 232510 206320 210810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 355810000 29035 3598 27275 54557;54558 44036;44037 44036 2 9606 Homo sapiens 0.02042843301433095 VINLNDNTFTEK Unmodified 1406.7042 0.70415892 162 A0A024R1U0;P46060;B4DY16;B4E0U0;H0Y4Q3 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 0 6.5 0.5 1 1 56.596 56.662 3 3.2704E-06 16711 20230619_1886_Aki_TMTPro18x_K_F6 142.76 128.41 181790 145460 157010 175160 170260 210530 214380 191390 219520 243230 217260 202300 236650 187230 199860 243600 217400 211310 167880 133430 161930 174910 177180 209720 213670 198240 223430 241780 223750 206750 239070 196680 205090 241970 207790 201070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 451180000 29036 162 27276 54559;54560 44038 44038 1 9606 Homo sapiens 0.01707500209886348 VINQILTEMDGMSTK Unmodified 1678.827 0.82699294 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;Q9NTC4;Q9HAP0 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 5.33 3.09 1 1 1 65.19 65.205 3 7.0311E-08 20195 20230619_1887_Aki_TMTPro18x_K_F7 134.9 116.45 37548 33537 34907 33723 34701 38453 40258 39366 37276 45754 41034 44022 51156 37667 46408 47161 47984 49493 34720 30702 35671 34134 36201 38565 40187 40318 38354 45821 42399 44539 51620 39602 47364 47368 45906 46978 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 215760000 29037 3656 27277 54561;54562;54563 44039;44040;44041 44040 3 9606 Homo sapiens 0.014732525546378383 VINSVDIK Unmodified 886.51238 0.51238239 4000 Q59ER5;Q53H17;Q53GN4;A0A8V8TNU2;A0A8V8TNT7;O75083;A0A8V8TP22;A0A8V8TQ74;A0A8V8TQK0;V9HWG7;A0A8V8TP31;D6RD66;B3KXN4 WDR1;HEL-S-52 WD repeat-containing protein 1 yes no 0 0 0 6.5 0.5 1 1 50.575 50.655 3 0.0018337 13878 20230619_1887_Aki_TMTPro18x_K_F7 110.41 54.858 87536 81337 91933 94018 114990 136270 109150 114150 133560 110840 122940 115220 119530 100050 122480 128500 128370 120980 81044 74544 93398 94461 117550 134060 111150 118010 134200 112390 126460 116330 122250 105210 124850 128240 122710 115020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 180610000 29038 4000 27278 54564;54565 44042;44043 44043 2 9606 Homo sapiens 0.0645866904022796 VIPAADLSQQISTAGTEASGTGNMK Oxidation (M) 2462.1959 0.19588221 3432 Q59GM9;P11216;B4DSD8;H0Y4Z6;Q8TDG6 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 1 0 7 0 1 57.777 57.829 3 5.0832E-09 16921 20230619_1887_Aki_TMTPro18x_K_F7 112.47 104.52 19101 16966 20316 22194 24686 20889 22510 25373 19930 25322 35893 33175 28662 27488 31636 33852 28351 37059 17681 15571 20605 21970 25172 21340 22769 25607 21088 25808 35748 33159 29630 28862 31954 34089 27218 35133 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27941000 29039 3432 27279 54566 44044 44044 2059 1 9606 Homo sapiens 0.02327210808198288 VIPAADLSQQISTAGTEASGTGNMK Unmodified 2446.201 0.20096759 3432 Q59GM9;P11216;B4DSD8;H0Y4Z6;Q8TDG6 PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, brain form yes no 0 0 0 7.33 0.471 2 1 59.886 59.929 3;4 5.4262E-28 17791 20230619_1887_Aki_TMTPro18x_K_F7 193.64 178.87 37832 28227 41388 50408 34895 46863 44880 42685 51121 55634 55787 59991 57559 57405 62285 59757 64496 77360 34990 26023 41717 48986 37087 47510 44876 44269 51933 55668 57144 60592 58972 59417 63364 61005 61777 73244 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 79373000 29040 3432 27279 54567;54568;54569 44045;44046 44045 2 9606 Homo sapiens 0.035715146707843815 VIPAALK Unmodified 710.46906 0.46906101 4466 Q9BXW7-2;Q9BXW7 CECR5 Cat eye syndrome critical region protein 5 yes no 0 0 0 2.5 0.5 1 1 52.056 52.108 2 0.016485 15074 20230619_1882_Aki_TMTPro18x_K_F3 109.88 40.491 422260 356610 377970 417890 434500 488620 462570 434690 559250 318890 359810 301140 317220 272130 412280 382040 384890 299510 390190 326980 388770 417910 447900 487490 467520 444820 555440 328470 376500 306060 329750 287350 415860 377670 367940 285660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 183230000 29041 4466 27280 54570;54571 44047;44048 44048 2 9606 Homo sapiens 0.10224524053614914 VIPEDASESEEK Unmodified 1331.6093 0.60925548 1600 Q6DHZ8;B2RBM8;A0A669KBJ7;Q9H2P0;A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein yes no 0 0 0 1 0 1 45.882 45.882 2 0.00092761 12652 20230619_1880_Aki_TMTPro18x_K_F1 120.68 76.373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29042 1600 27281 54572 44049 44049 1 9606 Homo sapiens -0.04328478051934326 VIPELNGK Unmodified 868.50182 0.5018177 3382;4086 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q0QET7;A4UCT1;Q5ZEY3 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 7.2 0.748 1 2 2 52.269 52.345 2;3 0.0005269 14568 20230619_1887_Aki_TMTPro18x_K_F7 135.84 75.083 311850 268240 316310 316150 347850 398300 353670 376250 434650 417650 463890 474440 500510 433640 457310 501660 501820 490320 288490 245950 321450 316490 359180 396010 358880 386870 439380 421670 476240 477780 507670 452160 468470 502310 479630 465870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4259699999.9999995 29043 3382;4086 27282 54573;54574;54575;54576;54577 44050;44051;44052 44051 3 9606 Homo sapiens 0.06230686385811168 VIPGAAEK Unmodified 783.44905 0.44905385 3910 Q15019-2;Q15019;B5MCX3;C9J2Q4;C9J938;C9JB25;C9IY94;C9IZU3;C9JQJ4;C9JZI2;B5MD47 SEPT2 Septin-2 yes no 0 0 0 6.5 0.5 1 1 44.764 44.851 2;3 0.0010068 11614 20230619_1886_Aki_TMTPro18x_K_F6 110.31 38.595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29044 3910 27283 54578;54579 44053;44054 44053 2 9606 Homo sapiens 0.048667283229860914 VIPLDRDNK Unmodified 1068.5928 0.59275797 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;F5GY55;B7Z2A1;F5GWI0;F5H2L3;A0A7P0Z4L2 DDB1 DNA damage-binding protein 1 yes no 0 0 1 7.5 0.5 1 1 43.047 43.091 3 0.00098892 10562 20230619_1887_Aki_TMTPro18x_K_F7 105.1 77.798 285640 229790 300460 296250 271040 301320 278040 263940 394720 343300 361880 280120 331240 256380 333820 322070 338620 227830 264210 210940 303480 293790 284240 303470 283610 274410 394040 340980 370920 286670 338990 268740 339560 317440 323170 217800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 347250000 29045 1710 27284 54580;54581 44055 44055 1 9606 Homo sapiens 0.061205303632732466 VIPSPFK Unmodified 786.46398 0.46397563 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4;H0YIZ0;G3V2Y4;G3V4W5 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 3.5 0.5 1 1 55.557 55.583 2 0.018143 16616 20230619_1882_Aki_TMTPro18x_K_F3 107.66 52.264 356840 292280 338740 321930 395200 465260 431390 415930 479250 240500 251720 209640 202760 184560 414800 234850 270360 233520 329830 267870 346450 324700 407280 458390 434100 423540 475630 251980 267020 213700 218660 193850 409080 235700 259820 221950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 277890000 29046 657 27285 54582;54583 44056;44057 44056 2 9606 Homo sapiens 0.06220220190994041 VIQALAMK Unmodified 872.51536 0.51535927 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJI0;A0A804HJA1;A0A804HKK7;A0A804HKX6 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 3.5 0.5 2 2 57.452 57.47 2;3 0.0043444 17407 20230619_1882_Aki_TMTPro18x_K_F3 127.84 68.863 128290 112230 118550 125630 128880 158140 141300 144650 177580 63897 57462 44296 54567 43521 90633 59544 68130 46951 118600 102850 121460 126230 133580 157100 142780 146530 173700 68532 64478 45958 57527 45781 90103 58979 65257 44806 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122930000 29047 1723 27286 54584;54585;54586;54587 44058;44059 44058 2 9606 Homo sapiens 0.07400220893396181 VIQCFAETGQVQK Unmodified 1506.7501 0.75006325 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 7.5 0.5 1 1 54.337 54.404 3 5.6528E-08 15457 20230619_1888_Aki_TMTPro18x_K_F8 155.88 133.35 333790 252920 298590 355670 290330 295700 325390 291070 363410 382330 356070 356750 396590 353470 327520 452870 405990 364540 308230 232440 306420 349810 303080 303510 327220 300370 368020 380770 367410 363310 400400 369790 339270 448210 387400 347330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 954830000 29048 826 27287 54588;54589 44060;44061 44061 2 9606 Homo sapiens 0.016958221204504298 VIQCYIQYGNEEQRK Unmodified 1926.9258 0.92579578 3932 Q15397;B2RDG4 KIAA0020 Pumilio domain-containing protein KIAA0020 yes no 0 0 1 8 0 1 50.646 50.722 3 2.036E-05 13823 20230619_1888_Aki_TMTPro18x_K_F8 107.14 103.11 199270 168220 200210 224930 186290 206720 194650 212840 201590 261320 199570 191530 240880 181260 181750 303010 246390 246870 184300 154450 203220 222220 194810 210550 196140 218260 205360 259240 206560 197390 241650 193860 190100 298990 235120 235070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 160480000 29049 3932 27288 54590 44062;44063 44062 2 9606 Homo sapiens -0.0005900815610857535 VIQEIVDK Unmodified 942.5386 0.53859714 1029;1885 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;P51114-3;B4DM21;B4DM78;B4DGH9;E7EU85;A0A994J7P9;P51116 FXR1;FXR2 Fragile X mental retardation syndrome-related protein 1;Fragile X mental retardation syndrome-related protein 2 no no 0 0 0 5 0.816 1 1 1 56.648 56.709 2 0.00041272 16953 20230619_1883_Aki_TMTPro18x_K_F4 129.1 56.552 188300 144770 155380 183530 183490 206410 186120 180870 225820 232680 211660 203910 249240 192550 190030 274930 251610 229000 173800 132890 161170 182400 188610 206400 188710 187930 227420 231550 219360 208030 250310 203400 198140 272130 239990 218070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2900700000 29050 1029;1885 27289 54591;54592;54593 44064;44065;44066 44064 3 9606 Homo sapiens 0.06502938211713172 VIQEIWPVLSETLNK Unmodified 1767.9771 0.9770863 434 E9PFH4;B2R6H7;A0A024R794;Q9Y5L0-3;Q9Y5L0;B3KMX1;B3KM69;C9J7E5;Q9Y5L0-5;Q9Y5L0-1 TNPO3 Transportin-3 yes no 0 0 0 2 0 1 66.609 66.615 3 0.042763 21489 20230619_1881_Aki_TMTPro18x_K_F2 45.434 17.223 1669 2187.6 2854.5 1654.5 2787.8 1678.5 2394.9 1499 2465.6 2788 2787.2 2750.8 2489.1 1425.6 2190.5 2188 1805.7 2834.7 1558.2 1996.4 2790.8 1720.2 2875.7 1698.6 2439.9 1580.9 2523.1 2746.3 2830.9 2746.8 2529.7 1559.1 2212 2222.2 1738.6 2681.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3542000 29051 434 27290 54594 44067 44067 1 9606 Homo sapiens 0.12381683880289529 VIQGDGVDINTLQEIVEGMK Unmodified 2157.0987 0.098734352 426 P43490;A0A024R718;A0A7P0T9I9;A0A7P0T895;A0A7P0T8L3;A0A7P0TAS5;A0A7P0T931;A0A7P0T862 NAMPT;PBEF1 Nicotinamide phosphoribosyltransferase yes no 0 0 0 6.2 0.748 1 2 2 65.902 65.937 3;4 2.1318E-22 20492 20230619_1887_Aki_TMTPro18x_K_F7 177.41 161.46 77334 61019 68891 78426 57182 74909 70507 71715 68881 86356 83112 93545 92060 83325 97607 107190 93192 118430 71428 56015 70575 77712 60778 75913 70316 73899 70921 86670 85106 94285 93961 87547 98976 107920 89383 112270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 212590000 29052 426 27291 54595;54596;54597;54598;54599 44068;44069 44069 2 9606 Homo sapiens 0.06646893389824982 VIQHNALEDR Unmodified 1193.6153 0.61528433 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YFD1;Q6PEK6 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 3.5 0.5 1 1 35.412 35.464 3 4.1541E-10 7742 20230619_1882_Aki_TMTPro18x_K_F3 183.95 152.58 127960 89982 136420 160430 204000 205710 190230 196870 243160 272220 438230 607840 372210 400740 424140 296000 492790 523220 118280 82976 139040 156670 206070 204320 194330 203860 252280 281090 438790 593910 384970 414310 433440 312330 471040 494440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 413130000 29053 2865 27292 54600;54601 44070;44071 44070 2 9606 Homo sapiens 0.026221297608799432 VIQTHPHANK Unmodified 1143.6149 0.6148904 400 A0A024R6K3;Q86TU7;Q6NXR6;Q86TU7-3;Q86TU7-2 SETD3 Histone-lysine N-methyltransferase setd3 yes no 0 0 0 1 0 1 30.464 30.464 4 6.0413E-07 6169 20230619_1880_Aki_TMTPro18x_K_F1 156.51 123.98 24864 13153 29418 28898 28427 31839 26688 31492 35026 30037 48466 48664 42206 37617 36233 19665 48239 42673 22975 12187 29483 27904 29565 31933 27304 32155 35695 31002 48806 48142 42999 38232 37513 21401 46000 40307 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12859000 29054 400 27293 54602 44072 44072 1 9606 Homo sapiens 0.04882754831692182 VIQWCTHHK Unmodified 1207.592 0.59204647 2881 E5RJR5;E5RI56;P63208;E7ERH2;F8W8N3;P63208-2;E5RGM3 SKP1 S-phase kinase-associated protein 1 yes no 0 0 0 3 0 1 39.687 39.743 4 0.0013102 9476 20230619_1882_Aki_TMTPro18x_K_F3 90.629 70.867 66203 46527 56230 56817 46443 83871 62100 67640 82180 52668 50998 67054 70553 71111 51925 98537 101490 88349 61086 42709 57849 56882 49756 82284 62325 69797 81259 54557 54741 67617 70668 74589 56115 97860 96537 84070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50126000 29055 2881 27294 54603 44073 44073 1 9606 Homo sapiens -0.003445875574470847 VIREEEEEEASFENESIEEPEER Unmodified 2807.2257 0.2257216 4070 Q5U5Z3;Q9UL42 PNMA2 Paraneoplastic antigen Ma2 yes no 0 0 1 1 0 1 52.076 52.076 3 4.621699999999999E-44 15189 20230619_1880_Aki_TMTPro18x_K_F1 233.5 215.99 42218 35295 37472 31300 21304 23145 32739 26014 32196 43693 33910 34903 49188 31296 30653 50258 39080 39534 39007 32288 38174 31887 23716 24132 32345 26877 32973 42921 35370 35711 48768 33446 32070 49537 37313 37661 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149430000 29056 4070 27295 54604 44074 44074 1 9606 Homo sapiens -0.10560223503398447 VIREPKPR Unmodified 993.60835 0.60834846 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 2 3 0.816 1 1 1 32.423 32.486 4 0.076298 6501 20230619_1883_Aki_TMTPro18x_K_F4 56.378 45.549 938760 833160 891510 763040 804270 702340 779590 821400 830900 1055500 1243400 897100 968840 758450 987530 1004900 1019300 632800 868150 762200 907040 776820 840300 718840 790110 836960 860470 1048700 1241900 914360 997660 799770 1005600 985300 972320 606390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 334370000 29057 3606 27296 54605;54606;54607 44075;44076;44077 44077 3 9606 Homo sapiens 0.11128861670988499 VIRPLDQPSSFDATPYIK Unmodified 2046.0786 0.078591257 2126 A8K8U1;Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 1 2 0 1 57.574 57.589 4 7.9530999999999995E-19 17608 20230619_1881_Aki_TMTPro18x_K_F2 189.31 161.66 64449 56803 62273 67693 60382 65753 62019 65191 70198 83184 77433 68745 83561 76016 72602 98018 83997 90924 59607 52084 63436 67451 62919 66643 62731 67111 71427 82658 79310 70754 84609 79323 74794 97669 80305 86409 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 304480000 29058 2126 27297 54608 44078 44078 1 9606 Homo sapiens 0.09739510512167726 VISEYQK Unmodified 865.45453 0.45453316 4582 Q9NR45;V9HW39;Q5TBR0;Q9P0B2;Q5TBR1 NANS;HEL-S-100 Sialic acid synthase yes no 0 0 0 6 0 1 44.922 45.011 2 0.0060433 11708 20230619_1886_Aki_TMTPro18x_K_F6 142.64 77.859 153690 76660 183760 205550 273000 292660 238960 266010 267120 180340 268410 289120 211910 229450 269240 135940 312730 298220 141990 71331 185650 197820 275450 288420 243810 271220 270170 190270 273120 286350 221170 233670 274400 147650 298700 281580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78479000 29059 4582 27298 54609 44079 44079 1 9606 Homo sapiens 0.0164240711480943 VISFEEQVASIR Unmodified 1376.73 0.72997974 1127 B3KM48;A0A0S2Z5H7;D6RAX7;Q9BT78;Q53FV3;D6RFN0;Q9BT78-2 COPS4 COP9 signalosome complex subunit 4 yes no 0 0 0 6 0 1 60.821 60.879 2 5.6911E-13 18474 20230619_1886_Aki_TMTPro18x_K_F6 210.44 166.81 181390 145230 174710 192470 175280 191100 200870 192780 222040 221310 218950 225870 245580 197530 230280 256590 260980 262220 167650 133350 178160 190450 182700 193380 201710 197640 224950 222270 226030 228160 249030 207880 236260 257130 249420 248990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 62187000 29060 1127 27299 54610 44080;44081 44080 2 9606 Homo sapiens 0.05668394452186476 VISGQFLSDR Unmodified 1120.5877 0.58767259 3786 Q01970-2;Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes no 0 0 0 8 0 1 51.802 51.879 2 0.007019 14340 20230619_1888_Aki_TMTPro18x_K_F8 85.622 60.45 149050 128490 154690 156660 174760 212160 191180 178170 204930 190690 210880 194650 207320 168270 206290 210780 205130 208800 137910 117850 157030 156610 180490 209490 192200 184690 208180 192230 215850 196630 211580 176730 209750 211020 196300 198330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42932000 29061 3786 27300 54611 44082 44082 1 9606 Homo sapiens 0.03220226500661738 VISNEFNSR Unmodified 1064.5251 0.52507234 3795 Q9BUI6;Q05086-3;A0A0D9SG77;A0A6Q8PHE5;A0A1B0GVL3;Q9H2G0;Q05086-2;Q05086;Q96GR7;Q5W7F7 UBE3A Ubiquitin-protein ligase E3A yes no 0 0 0 6 0 1 43.247 43.341 2 0.0029617 11030 20230619_1886_Aki_TMTPro18x_K_F6 101.54 75.372 98280 64521 109700 111250 132060 142390 119570 136990 127670 112020 150560 169890 143410 129760 137520 107010 173130 160770 90852 59487 110820 108850 135000 141420 121620 139610 130440 116290 153220 168370 146380 133970 141720 111030 165220 152180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70626000 29062 3795 27301 54612 44083 44083 1 9606 Homo sapiens -0.004609195675357114 VISPSEDR Unmodified 901.45051 0.45051041 3184 Q2TSD3;L7RSM7;P17252;A0A169TED2;Q59FI5 PRKCA Protein kinase C;Protein kinase C alpha type yes no 0 0 0 2 0 1 36.068 36.126 2 2.2451E-05 8124 20230619_1881_Aki_TMTPro18x_K_F2 135.6 79.057 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29063 3184 27302 54613 44084 44084 1 9606 Homo sapiens -0.004156823789003283 VISSANR Unmodified 745.40825 0.40825167 3734 P62917;E9PKZ0;G3V1A1;E9PP36 RPL8 60S ribosomal protein L8 yes no 0 0 0 7.5 0.5 1 1 31.815 31.864 2 0.010707 6066 20230619_1887_Aki_TMTPro18x_K_F7 117.62 51.483 33964 15672 46076 44734 83529 68220 58614 81280 47194 14195 29120 25615 18835 21102 48970 11514 33487 23126 31413 14610 46325 43060 82867 67473 60237 80244 47906 18288 30328 25394 21013 21394 48197 12500 32118 21880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17823000 29064 3734 27303 54614;54615 44085 44085 1 9606 Homo sapiens 0.025363870033743297 VISTACSLEDK Unmodified 1221.5911 0.59110299 1972 H7C3I5;A6NND8;A6NHJ8;A6NMA8;O95825;H7C3S0;C9K0F7;F8WF64;O95825-2;C9JZK8;H7C338 CRYZL1 Quinone oxidoreductase-like protein 1 yes no 0 0 0 5 0 1 50.884 50.959 3 0.0004368 14162 20230619_1885_Aki_TMTPro18x_K_F5 82.171 49.648 101150 80300 93792 101190 96914 114040 107150 108700 124630 121230 124710 119320 149810 123150 125430 142860 145230 141010 93459 73697 95991 100640 100780 114200 108000 111740 126020 121820 129000 121410 150920 127980 129150 143100 138730 133960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104790000 29065 1972 27304 54616 44086 44086 1 9606 Homo sapiens -0.0108289150764449 VISTTDAER Unmodified 990.49819 0.49818889 1553 O95394-4;J3KN95;H0Y987;A0A8V8TMH7;B3KN28;A0A8V8TLT8;A0A494C1Q4;A0A8V8TNH4;A0A494C1E2;A0A8V8TMI1;O95394;O95394-3;A0A087WT27;A0A494C0G1;A0A8V8TM25;A0A8V8TNM1 PGM3 Phosphoacetylglucosamine mutase yes no 0 0 0 2 0 1 37.155 37.216 2 3.7954E-17 8585 20230619_1881_Aki_TMTPro18x_K_F2 248.99 158 69976 41311 86235 85662 123230 132320 89620 105590 108240 75422 113180 131230 112510 96431 115460 56581 131310 128750 64717 38216 86785 83376 124130 129560 92951 108870 109300 79587 116010 129370 114990 98582 117880 61740 125460 121530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49028000 29066 1553 27305 54617 44087;44088 44088 2 9606 Homo sapiens 0.0025597182127512497 VISYEEGK Unmodified 923.46001 0.46001246 911 C9J931;Q6NZ61;A8K005;A0A090N900;Q15382 RHEB GTP-binding protein Rheb yes no 0 0 0 4 0 1 46.189 46.233 3 0.038898 12259 20230619_1883_Aki_TMTPro18x_K_F4 51.059 18.739 51902 41033 58405 59842 50590 58833 61769 51036 77296 69239 71947 78030 81807 69356 66249 70483 81637 84275 48032 37721 58686 58853 53491 59373 62097 53219 77635 69307 74527 78474 82452 71909 68509 71576 77980 79889 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 277920000 29067 911 27306 54618 44089 44089 1 9606 Homo sapiens -0.0047791409338060475 VITDENWR Unmodified 1031.5036 0.50360861 4510 Q9H3N1;G3V448;B7Z7R5 TMX1 Thioredoxin-related transmembrane protein 1 yes no 0 0 0 3.5 0.5 1 1 46.971 47.032 2 0.0012678 12798 20230619_1882_Aki_TMTPro18x_K_F3 145.34 117.82 350040 307290 339670 333640 352390 446020 390670 354640 462420 443970 470290 440230 505350 399170 423740 457430 518470 493080 323740 281520 346160 336340 366610 440360 393860 371030 467350 443980 483400 445750 510630 416430 437710 460650 494980 468040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 376390000 29068 4510 27307 54619;54620 44090 44090 1 9606 Homo sapiens -0.01088304596260059 VITDIAGVIPAEK Unmodified 1324.7602 0.76021723 3545 P35249;H7C1P0 RFC4 Replication factor C subunit 4 yes no 0 0 0 7.33 0.471 2 1 62.088 62.122 2;3 0.00023004 18693 20230619_1888_Aki_TMTPro18x_K_F8 80.522 59.058 107510 90018 107570 98787 77997 92166 94652 102470 120540 114540 118040 110590 128210 106820 118230 126220 124400 124680 99424 82491 108760 99043 83893 93963 95354 104280 121230 115000 121620 112360 130040 111350 120780 126430 118970 118440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 899830000 29069 3545 27308 54621;54622;54623 44091;44092 44092 2 9606 Homo sapiens 0.11082753117375432 VITDVYYVDGTEVER Unmodified 1756.8519 0.85194536 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B7Z3E7;M0R142 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 0 3 0 1 57.076 57.109 2 2.8641E-05 17244 20230619_1882_Aki_TMTPro18x_K_F3 114.87 92.822 22637 17377 19277 23949 23348 24731 25027 25493 26529 25247 25507 25020 26339 22449 26898 28441 26708 26820 20898 15966 19952 23646 23972 24963 25181 25985 26904 25521 26258 25333 26882 23556 27340 28391 25557 25491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14368000 29070 1984 27309 54624 44093 44093 1 9606 Homo sapiens 0.0037934695319563616 VITEEEK Unmodified 846.43346 0.43346336 2040 Q6NZ55;A8K4C8;P26373;P26373-2;O60250;H3BUK8;J3KS98 RPL13 60S ribosomal protein L13 yes no 0 0 0 2 0.816 1 1 1 42.245 42.293 2 0.0033647 10892 20230619_1881_Aki_TMTPro18x_K_F2 155.51 67.481 166790 104460 227790 238400 279550 286660 228940 274220 225440 175620 297270 341990 234760 242160 290390 123560 327910 330920 154460 96764 227120 230120 284530 285690 233940 278330 232400 187780 299310 335910 244500 246820 295420 138240 313400 312100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 344100000 29071 2040 27310 54625;54626;54627 44094 44094 1 9606 Homo sapiens 0.0041039701528688965 VITEYLNAQESAK Unmodified 1464.746 0.74602373 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 6.5 0.5 2 2 58.141 58.201 2;3 4.1852E-15 17357 20230619_1886_Aki_TMTPro18x_K_F6 228.12 162.81 121740 111670 121550 121080 105550 128910 133330 130770 133570 149360 148830 136990 172420 141070 151400 169280 146710 160860 112650 102290 123270 121680 111710 129820 132880 133960 136770 149550 152950 139860 174150 146910 154170 169150 140520 152820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 528860000 29072 1229 27311 54628;54629;54630;54631 44095;44096 44095 2 9606 Homo sapiens 0.032240558984312884 VITFANQDDYISFR Unmodified 1687.8206 0.82058566 3027 H0Y714;Q96G21;E7ENR5;B8ZZ47;B9A008 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 yes no 0 0 0 8 0 1 62.141 62.169 2 8.788E-05 18712 20230619_1888_Aki_TMTPro18x_K_F8 145.08 133.91 27568 26787 26746 30260 28463 33704 33515 31893 31534 34263 34976 33877 41627 32580 37551 38321 38582 41225 25515 24541 27292 30323 29571 33780 33439 32774 32396 34485 36014 34376 42057 33975 38317 38578 36923 39115 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19825000 29073 3027 27312 54632 44097 44097 1 9606 Homo sapiens 0.004188187097724949 VITFIDLAGHEK Unmodified 1341.7293 0.72925145 155 A0A024R1S5;O00178;B2RDW9 GTPBP1 GTP-binding protein 1 yes no 0 0 0 8 0 1 60.811 60.843 3 6.1018E-10 18140 20230619_1888_Aki_TMTPro18x_K_F8 181.98 136.07 177320 151410 184440 204710 144760 190670 156710 158120 169060 213810 244860 220560 240080 205720 224230 252430 239120 274320 164060 139020 186300 202090 154050 193040 157900 165370 174690 213260 247280 223240 244400 215210 229290 254040 228890 260190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157090000 29074 155 27313 54633 44098 44098 1 9606 Homo sapiens 0.07205599803137375 VITIANR Unmodified 785.47594 0.4759373 4008 Q53SW3;Q9BPU6 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 1 0 1 42.745 42.745 2 0.040171 11331 20230619_1880_Aki_TMTPro18x_K_F1 90.661 23.317 60867 50481 59725 62211 55333 53343 52103 47829 59527 57556 89172 70755 70654 63314 59466 61576 89776 71520 56278 46313 60690 61750 57687 54525 53003 49559 61333 58063 89130 71046 72199 65455 62341 62467 85478 67891 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37879000 29075 4008 27314 54634 44099 44099 1 9606 Homo sapiens 0.0746183693418061 VITIESQK Unmodified 916.52295 0.52294707 29 A0A024QZB1;O15047 hCG_1998636;SETD1A Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1A yes no 0 0 0 7 0 1 48.187 48.273 3 0.0040721 12802 20230619_1887_Aki_TMTPro18x_K_F7 82.241 53.091 43200 39375 53960 54537 51776 68295 60005 59657 70001 59951 64133 67576 67808 59473 60437 66476 72285 72721 40057 36157 53910 53995 54240 67772 60339 61549 70483 60831 66259 67977 68765 61984 62272 67025 69050 69003 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7047600 29076 29 27315 54635 44100 44100 1 9606 Homo sapiens 0.06134651694662807 VITIMQNPR Oxidation (M) 1086.5856 0.5855641 3710 P62269 RPS18 40S ribosomal protein S18 yes yes 0 1 0 1.5 0.5 1 1 42.527 42.567 2 0.0042565 11004 20230619_1881_Aki_TMTPro18x_K_F2 93.143 67.584 441270 356540 389040 442610 546440 553110 492640 470280 576390 234110 254580 198890 216810 146800 339430 223790 245940 156480 407600 327150 402180 441240 553520 549080 502070 479940 568580 248850 274600 202180 228130 157310 337160 220290 235600 149660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 258680000 29077 3710 27316 54636;54637 44101;44102 44102 2397 2 9606 Homo sapiens 0.045734744911896996 VITIMQNPR Unmodified 1070.5906 0.59064948 3710 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 0 3.5 0.5 1 1 49.726 49.781 2 5.9259E-05 13851 20230619_1883_Aki_TMTPro18x_K_F4 162.25 114.6 1338300 1225700 1121400 1258200 1264500 1555000 1415800 1491900 1785300 559360 469240 387600 441530 408420 842130 584970 568490 346620 1236800 1122200 1160400 1272400 1308500 1548200 1429100 1503200 1741400 612370 542550 403330 471300 429570 832680 572600 545030 332560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1176200000 29078 3710 27316 54638;54639 44103;44104 44104 2 9606 Homo sapiens 0.05817778353821268 VITMFVQR Unmodified 992.54772 0.54772204 3444 P13010;Q53TC2;C9JZ81;H7C0H9 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 5 0 1 57.926 57.982 2 0.042945 17063 20230619_1885_Aki_TMTPro18x_K_F5 82.716 53.818 114180 119230 108760 97553 151750 261060 141830 147040 275560 92720 86765 116630 123790 111250 100460 136450 124980 136450 105720 108930 111650 102460 155000 248760 147490 156490 265080 97885 99674 117160 124230 116220 104120 136610 119420 129560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41218000 29079 3444 27317 54640 44105 44105 1 9606 Homo sapiens 0.05115008296399992 VITVDGNICTGK Unmodified 1275.6493 0.64928657 846 O95299;E7ESZ7;A0A7I2V594;Q7Z518;A0A7I2V3H5;A0A087WXC5;A0A7I2V2X3;A0A7I2V2W9;A0A7I2V5B2;A0A7I2V5U7;A8K413;A0A7I2V419;H7C2X4;A0A7I2V458;A0A7I2YQU0;Q53SW4;A0A7I2V438;A0A7I2V5L0;A0A7I2V2N6;Q59FM0;A0A7I2V2F6;A0A7I2V4N8;A0A7I2V327;H7C1Y7;O95299-2;A0A7I2V2J5;C9J6X0;A0A7I2V3D4;A0A7I2V2I6;Q8N1B9 NDUFA10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes no 0 0 0 8 0 1 51.833 51.91 2 4.0321E-09 14351 20230619_1888_Aki_TMTPro18x_K_F8 194.5 154.5 42207 36301 38954 48306 53406 57465 51170 49536 50618 44334 47099 51051 46919 40996 39032 47498 53117 52409 39015 33325 40117 47890 54253 57226 51695 51026 51455 45297 48505 51172 47540 42962 40652 47877 50681 49729 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138630000 29080 846 27318 54641 44106 44106 1 9606 Homo sapiens 0.022487901376052832 VIVDFSSPNIAK Unmodified 1288.7027 0.70270235 3650 P54136;P54136-2 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 3.67 3.09 1 1 1 59.798 59.814 3 0.00010351 18382 20230619_1880_Aki_TMTPro18x_K_F1 110.66 87.744 96175 76894 86685 92466 83062 95826 98923 94426 117030 111580 109050 119100 128700 102520 103570 148960 126880 144110 88845 70536 88836 92159 87065 96616 99376 97045 117900 112090 113170 120040 129520 108780 107310 148520 121290 136860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 278330000 29081 3650 27319 54642;54643;54644 44107;44108 44107 2 9606 Homo sapiens 0.06989910911806874 VIVEHAR Unmodified 822.47119 0.47118627 1567;2085 A0A590UJK4;A0A590UK01;A0A590UJP7;Q59GY3;A8K588;A0A590UK80;Q13247-3;Q13247;B5BU15;Q13247-2;B4DEM8;A8K644;Q08170;A0A0D9SEM4;Q53F45 SRSF6;SFRS6;SFRS4;SRSF4 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 4 no no 0 0 0 4.5 0.5 1 1 30.603 30.676 2 0.0074767 5916 20230619_1885_Aki_TMTPro18x_K_F5 124.89 73.199 79320 48329 62709 74344 92794 93601 84927 84548 107540 82428 106100 94002 100960 80357 76722 66464 111730 96585 73101 44508 65598 73140 93802 92965 86757 86938 108120 83828 108580 94438 102040 82678 80303 68744 106460 91473 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77306000 29082 1567;2085 27320 54645;54646 44109;44110 44110 2 9606 Homo sapiens 0.05284952791419073 VIVFDGVPSK Unmodified 1059.5964 0.59644637 3692 P61221 ABCE1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 1.5 0.5 1 1 58.421 58.428 3 0.0031989 17852 20230619_1880_Aki_TMTPro18x_K_F1 75.652 61.445 107110 84886 100460 101380 95146 111030 112070 110940 113410 123580 133660 124810 137910 117250 116830 146320 124740 133160 98971 77865 102540 101190 99745 111540 112100 113680 116310 124230 136300 126480 139600 122710 119770 145750 119330 126590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 516910000 29083 3692 27321 54647;54648 44111;44112 44111 2 9606 Homo sapiens 0.0690320013713972 VIVGGSSEYK Unmodified 1037.5393 0.53932542 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709;Q68EN4;Q5H934;Q7Z4C6 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 6.5 0.5 1 1 46.524 46.609 2 1.7035E-07 12416 20230619_1886_Aki_TMTPro18x_K_F6 191.85 134.57 212490 187210 201380 206520 204480 245130 222300 212760 265380 252840 289360 272620 279670 229820 233300 300470 314320 269650 196500 171530 205600 207530 212870 244230 224470 220690 268800 254040 295140 274550 283560 242180 242880 298900 299650 256600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 162890000 29084 1432 27322 54649;54650 44113;44114 44113 2 9606 Homo sapiens 0.022057328607616 VIVPNMEFR Unmodified 1103.5798 0.57975044 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DM67 CSE1L Exportin-2 yes no 0 0 0 1 0 1 56.449 56.449 2 0.00072212 17030 20230619_1880_Aki_TMTPro18x_K_F1 145.16 88.052 316440 284650 299950 329030 264230 397390 342840 355820 368020 400030 339470 357020 432830 347150 344950 459170 400260 405370 292660 260900 305860 329550 280250 395470 341970 367450 372730 400590 353830 364110 434530 364420 355990 456270 382470 385580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265250000 29085 1462 27323 54651 44115 44115 1 9606 Homo sapiens 0.0321037597952909 VIVPNMEFR Oxidation (M) 1119.5747 0.57466507 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DM67 CSE1L Exportin-2 yes no 0 1 0 6.5 0.5 1 1 48.843 48.925 2 0.032833 13099 20230619_1887_Aki_TMTPro18x_K_F7 68.383 36.162 193880 188010 171990 186280 214620 221560 213260 201150 220360 221210 257560 233220 227800 188880 217030 260980 255460 231150 179320 172060 177250 188830 219420 221050 215320 207470 225560 222840 261040 234890 232910 200080 223240 259310 243880 219950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206860000 29086 1462 27323 54652;54653 44116 44116 967 1 9606 Homo sapiens 0.019660721168975215 VIVQFQPSSVPDEWGTTQDGQTRPR Unmodified 2827.3889 0.38891979 1873 B4DWG1;A0A994J542;B3KM47;Q9Y6Y8;Q9Y6Y8-2 SEC23IP SEC23-interacting protein yes no 0 0 1 7.5 0.5 1 1 57.046 57.099 3 1.5615E-35 16603 20230619_1887_Aki_TMTPro18x_K_F7 216.38 203.71 35981 33010 35956 36388 38403 49964 50443 48554 53831 47724 47706 42735 52244 42466 47438 50787 50921 54208 33295 30241 36589 36663 40070 49444 50248 49660 54388 48140 49404 43631 52939 44279 48534 51084 48710 51439 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45886000 29087 1873 27324 54654;54655 44117;44118 44117 2 9606 Homo sapiens 0.04832088919602029 VIVVGNPANTNCLTASK Unmodified 1756.9142 0.91416847 3570 V9HWF2;P40925;P40925-3;A0A5K1VW95;P40925-2;B9A041;C9JF79;C9JRL4 HEL-S-32;MDH1 Malate dehydrogenase;Malate dehydrogenase, cytoplasmic yes no 0 0 0 3 0 1 54.421 54.468 2 1.164E-51 16137 20230619_1882_Aki_TMTPro18x_K_F3 315.43 281.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29088 3570 27325 54656 44119 44119 1 9606 Homo sapiens 0.06598794820592957 VIYAMAEDGLLFK Unmodified 1468.7636 0.76358805 771 A0A0A8K9B7;B2R728;A0A024RDQ9;P30825;A0A1W2PR06;P52569;P52569-3 SLC7A1;SLC7A2 High affinity cationic amino acid transporter 1;Cationic amino acid transporter 2 yes no 0 0 0 8 0 1 65.074 65.093 3 0.00077105 19998 20230619_1888_Aki_TMTPro18x_K_F8 75.78 63.634 16351 15478 17762 19676 14621 11710 16361 17850 16871 18391 21001 21263 19324 17467 23375 22561 21362 24382 15145 14198 17882 19428 15440 12601 16430 17835 17325 18630 21292 21334 19971 18409 23584 22693 20479 23128 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21872000 29089 771 27326 54657 44120 44120 1 9606 Homo sapiens 0.04795679899712013 VIYEGLTNYEK Unmodified 1327.666 0.66598249 2953 F2Z2U4;H0Y4W2;Q9Y4A5-2;Q9Y4A5;Q59FH1;A0A994J4S5 TRRAP Transformation/transcription domain-associated protein yes no 0 0 0 6 0 1 56.948 57.02 3 3.967E-07 16872 20230619_1886_Aki_TMTPro18x_K_F6 133.81 108.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29090 2953 27327 54658 44121 44121 1 9606 Homo sapiens 0.015256142952239315 VKADRDESSPYAAMLAAQDVAQR Oxidation (M) 2507.2074 0.20744995 1363 A0A2R8Y811;P62263;E5RH77 RPS14 40S ribosomal protein S14 yes no 0 1 2 6 0 1 44.513 44.602 4 3.2972E-13 11489 20230619_1886_Aki_TMTPro18x_K_F6 131.56 120.46 65472 57454 64804 73497 79134 64535 80803 75970 66303 76320 86827 50797 55581 41356 80973 44620 44247 36994 60563 52719 66131 72794 80871 66264 80940 76844 69196 76281 86559 52481 58816 43186 79666 44491 42640 35245 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136230000 29091 1363 27328 54659 44122 44122 857 1 9606 Homo sapiens 0.01413452622227851 VKADRDESSPYAAMLAAQDVAQR Unmodified 2491.2125 0.21253533 1363 A0A2R8Y811;P62263;E5RH77 RPS14 40S ribosomal protein S14 yes no 0 0 2 6.67 0.471 1 2 50.647 50.726 3;4 2.7069E-34 13873 20230619_1887_Aki_TMTPro18x_K_F7 209.75 187.66 196590 168950 220890 196650 200790 187960 252770 214070 157540 217860 220100 152710 156860 125170 232690 122590 135860 94551 182020 154900 221910 196370 210910 191460 248970 217080 168550 217770 219870 157100 165470 129950 229320 122080 130640 90254 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1876599999.9999998 29092 1363 27328 54660;54661;54662 44123;44124;44125 44124 3 9606 Homo sapiens 0.026577564848594193 VKAEGPGLSR Unmodified 1012.5665 0.56654322 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 1 7.5 0.5 1 1 36.48 36.507 3 0.042972 8066 20230619_1888_Aki_TMTPro18x_K_F8 54.683 30.451 152840 121890 171200 165390 317070 229830 221790 184160 126640 172820 230040 112820 76592 51093 281310 33481 46867 26073 141450 111950 174390 164240 313970 226760 226230 191030 138650 173270 224040 115310 92311 53915 268160 34356 46964 24919 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91591000 29093 3484 27329 54663;54664 44126 44126 1 9606 Homo sapiens 0.06076261191810772 VKDEFSVDK Unmodified 1065.5342 0.53424004 275;1599 A0A024R3Z1;Q6NYC5;A0A669KB77;P11137-3;P11137 MAP2 Microtubule-associated protein;Microtubule-associated protein 2 no no 0 0 1 5 0 1 46.821 46.898 3 0.079013 12439 20230619_1885_Aki_TMTPro18x_K_F5 45.433 18.835 161370 129260 155500 152200 130010 129660 188280 157010 151100 187530 219630 170780 180610 133510 206690 156040 160620 143330 149150 118550 158060 151630 138380 133530 185330 159430 158780 187230 220170 172960 186560 140230 206890 155930 154000 136330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97255000 29094 275;1599 27330 54665 44127 44127 1 9606 Homo sapiens 0.004094289981367183 VKDEPQRR Unmodified 1026.557 0.55704117 3390;78 P05204;A0A024R046;O00479 HMGN2;HMGN4 Non-histone chromosomal protein HMG-17;High mobility group nucleosome-binding domain-containing protein 4 no no 0 0 2 6 0 1 27.323 27.356 4 0.014081 4859 20230619_1886_Aki_TMTPro18x_K_F6 81.594 54.496 50800 20389 96841 88521 158160 120070 103130 153410 76652 37561 109240 128110 48628 70559 122480 18823 103250 78939 47176 19253 95342 84128 157320 119730 106550 151180 80660 46810 108160 123920 55224 71811 121590 23476 98810 74428 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82378000 29095 3390;78 27331 54666 44128 44128 1 9606 Homo sapiens 0.044824929062770025 VKDTDDVPMILVGNK Unmodified 1642.86 0.86000763 655 P61224;P61224-3;A0A024RB87;F5H7Y6;E7ESV4;F5GX62;A6NIZ1;P61224-4;Q9BXV4;F5H004;B7ZB78;F5GZG1;F5H823;F5H6R7 RAP1B Ras-related protein Rap-1b;Ras-related protein Rap-1b-like protein yes no 0 0 1 8 0 1 57.271 57.323 3 0.00069707 16718 20230619_1888_Aki_TMTPro18x_K_F8 85.493 61.206 58476 53982 59708 69497 58804 63223 69531 67186 63067 79961 78228 66409 72089 55056 76272 71229 69010 70144 54124 49527 60600 68819 61388 64505 69306 68719 65291 79662 79224 67666 73902 58067 77058 71276 66107 66630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33165000 29096 655 27332 54667 44129 44129 1 9606 Homo sapiens 0.06429202669005463 VKEDENVPFLLVGNK Unmodified 1699.9145 0.91448604 3091 H7C3P7;P11233 RALA Ras-related protein Ral-A yes no 0 0 1 7.5 0.5 1 1 59.087 59.133 3 1.2136E-07 17446 20230619_1888_Aki_TMTPro18x_K_F8 131.96 99.866 156060 147370 171820 164810 137020 160880 165250 169450 158590 186120 186150 175030 191320 153410 200180 183480 169750 175590 144570 135010 172670 165050 145820 163210 164910 172960 163170 186770 189910 177480 195390 160600 201630 183530 162750 166830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117730000 29097 3091 27333 54668;54669 44130;44131 44131 2 9606 Homo sapiens 0.09252537812085393 VKEDPDGEHAR Unmodified 1251.5844 0.58437813 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;M0R019;M0R2T0;B4DEG4;M0R0N3;M0QYQ7 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 1 2.5 0.5 1 1 29.471 29.556 4 0.00010865 5364 20230619_1882_Aki_TMTPro18x_K_F3 132.86 119.05 28273 12481 37094 37773 72104 71092 51658 66112 52233 32156 55270 61170 44118 46977 57055 15075 48110 46563 26136 11655 37473 36448 71475 69190 53315 66907 53220 35210 56147 60241 46038 47220 57057 17578 46107 43898 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72767000 29098 3631 27334 54670;54671 44132 44132 1 9606 Homo sapiens -0.03135068343999592 VKEDPDGEHARR Unmodified 1407.6855 0.68548916 3631 P52272-2;P52272;A0A087X0X3;Q59ES8;M0R019;M0R2T0;B4DEG4;M0R0N3;M0QYQ7 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 0 0 2 3 0 1 23.056 23.208 5 0.0026944 3790 20230619_1882_Aki_TMTPro18x_K_F3 84.718 63.16 232970 118300 304430 288630 471070 358590 333820 394470 333890 245140 401430 378210 327330 287250 350740 147350 401950 324730 215450 109850 305490 278190 470890 358160 344820 396330 342450 259740 405360 374710 337560 292050 357870 160980 383550 306840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209460000 29099 3631 27335 54672 44133 44133 1 9606 Homo sapiens -0.0020461664130380086 VKEESQLPGTGGPEDVLQPVQR Unmodified 2362.2129 0.21285291 3790;4031 Q5CZB5;Q02952-3;Q02952-2;Q02952 DKFZp686M0430;AKAP12 A-kinase anchor protein 12 no no 0 0 1 4.67 0.471 1 2 51.293 51.345 3 5.7071E-12 14616 20230619_1883_Aki_TMTPro18x_K_F4 125.73 111.57 25576 20771 27038 24865 15413 19819 22675 18216 19470 27246 31358 30047 29235 21565 32542 31054 28687 28975 23660 19052 27156 24719 17130 20389 22365 18991 20505 27117 31525 30094 30027 23036 32813 30943 27486 27541 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177730000 29100 4031;3790 27336 54673;54674;54675 44134;44135 44134 2 9606 Homo sapiens 0.08623499476288998 VKEPSVQEATSTSDILK Unmodified 1830.9575 0.95747307 1107 A0A994J4Y3;A0A0S2Z4W1;A9Z1X7;A0A994J7H1;B7Z7U0;A0A994J7V4;A0A0S2Z4Z6;Q8IYB3-2;Q8IYB3;M0R088;B4DED5 SRRM1 Serine/arginine repetitive matrix protein 1 yes no 0 0 1 6.5 0.5 1 1 50.573 50.65 3 9.7334E-07 13864 20230619_1887_Aki_TMTPro18x_K_F7 115.15 90.864 151760 124180 144440 179900 140680 191880 174740 148810 144940 186390 187280 149600 180120 147420 161500 184680 131660 137490 140270 114130 147560 177110 147540 191990 173290 156110 151190 185210 189600 153600 183040 154100 163050 182310 126300 131070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 450790000 29101 1107 27337 54676;54677 44136;44137 44137 2 9606 Homo sapiens 0.07523263078860509 VKGDVDVSLPK Unmodified 1155.6499 0.6499385 3815 Q09666;Q8N274;Q6ZQN2;Q13727 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 1 7.5 0.5 1 1 48.829 48.905 3 0.00046555 13037 20230619_1888_Aki_TMTPro18x_K_F8 98.942 56.199 646850 459800 558380 415160 557720 679090 735480 710070 807770 913630 1000100 977990 937310 786220 1037100 809910 930790 764060 596950 420960 573920 427210 584820 667500 733500 728210 826640 914060 1014500 982960 962960 818490 1045600 811920 890440 726800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1151300000 29102 3815 27338 54678;54679 44138;44139;44140 44139 3 9606 Homo sapiens 0.07833952849000525 VKGDVDVSVPK Unmodified 1141.6343 0.63428844 3815 Q09666;Q8N274 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 1 7 0 1 46.207 46.294 3 0.0035972 11885 20230619_1887_Aki_TMTPro18x_K_F7 74.76 34.208 146420 107430 121350 125060 144780 162760 169060 157230 181740 182160 207410 195460 175330 162530 218640 158900 192140 164560 135110 98551 125760 125380 149250 161600 169390 161660 185400 183160 210200 196660 182060 168480 219760 160290 183910 156340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100720000 29103 3815 27339 54680 44141 44141 1 9606 Homo sapiens 0.06913666331956847 VKGEEIYSMDEGIR Unmodified 1624.7767 0.77667193 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 1 4 0 1 49.198 49.236 3 0.001541 13602 20230619_1883_Aki_TMTPro18x_K_F4 78.615 64.021 123940 130850 147750 130910 133450 135020 151220 128320 112910 157130 166230 103920 126880 90756 204540 96796 100450 79071 115000 119720 147780 132380 139940 136200 150330 132370 119450 155530 166080 107550 134150 94479 200280 96559 96971 75368 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148080000 29104 4386 27340 54681 44142 44142 1 9606 Homo sapiens -0.01072533778824436 VKLDYEEVGACQK Unmodified 1537.7446 0.74464352 376 A0A024R637;O60343-2;O60343-3;O60343;A0A3B3IRT3;O60343-5 TBC1D4 TBC1 domain family member 4 yes no 0 0 1 6 0 1 48.67 48.748 3 0.0059515 13349 20230619_1886_Aki_TMTPro18x_K_F6 74.853 62.086 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29105 376 27341 54682 44143 44143 1 9606 Homo sapiens -0.0027190146199700393 VKLPSGSK Unmodified 814.49125 0.49125301 3734 P62917;E9PKZ0;G3V1A1 RPL8 60S ribosomal protein L8 yes no 0 0 1 4 0 1 41.39 41.433 3 0.028639 10165 20230619_1883_Aki_TMTPro18x_K_F4 70.1 40.116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29106 3734 27342 54683 44144 44144 1 9606 Homo sapiens 0.07658703731385685 VKNPEDLSAETMAK Oxidation (M) 1547.7501 0.75012283 1224 A0A140VK39;Q9Y570;Q9Y570-4 PPME1 Protein phosphatase methylesterase 1 yes no 0 1 1 5 0 1 44.959 45.037 3 0.027198 11643 20230619_1885_Aki_TMTPro18x_K_F5 60.918 46.661 53185 48683 63212 65064 76693 73979 78640 66639 87588 68499 87485 55322 58661 37804 86721 43653 45478 29775 49292 44685 63590 64466 78532 73984 79422 68665 88605 68760 88330 56237 61973 39927 85173 43154 43803 28485 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32574000 29107 1224 27343 54684 44145 44145 762 1 9606 Homo sapiens -0.0018422267019104765 VKPAPDETSFSEALLK Unmodified 1730.9091 0.90906631 2621 B4DY09;Q53FG3;F4ZW62;Q12905;X6R6Z1;A0A0A0MRL0 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 1 7 0.707 1 2 1 56.553 56.617 3;4 5.5561E-14 16660 20230619_1886_Aki_TMTPro18x_K_F6 170.45 133.37 223770 187880 212180 243470 194910 226490 252540 206700 275660 244080 245030 255310 275460 240180 254490 264710 222340 275880 206860 172440 216470 241030 205470 229850 251890 213770 278230 245150 254280 258120 279160 249550 257460 266230 213420 261720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 692920000 29108 2621 27344 54685;54686;54687;54688 44146;44147 44146 2 9606 Homo sapiens 0.07284814229637959 VKPFMTGAAEQIK Oxidation (M) 1434.7541 0.754086 986 A0A0P1J1R0;Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;A0A024RDY2;E9PJF7;P13693-2;Q56UQ5 TPT1 Translationally-controlled tumor protein;TPT1-like protein no no 0 1 1 2 0 1 47.54 47.615 3 0.00018009 13326 20230619_1881_Aki_TMTPro18x_K_F2 100.31 82.17 122010 84862 97719 123890 119990 161980 120820 127360 172870 152590 143750 139460 152540 127190 136940 194600 157120 115190 112520 78054 101820 122300 123300 159990 123350 133130 172010 152560 149190 141870 154690 135050 140950 189880 149850 110400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156090000 29109 986 27345 54689 44148 44148 560 1 9606 Homo sapiens 0.054099116141969716 VKPFMTGAAEQIK Unmodified 1418.7592 0.75917137 986 A0A0P1J1R0;Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;A0A024RDY2;E9PJF7;P13693-2;Q56UQ5 TPT1 Translationally-controlled tumor protein;TPT1-like protein no no 0 0 1 2.5 0.5 1 1 52.553 52.599 3 4.4229E-09 15303 20230619_1882_Aki_TMTPro18x_K_F3 169.19 129.97 676220 504570 634930 654140 501460 858030 585880 646710 972970 855400 670900 687060 922720 615440 647920 1064600 886400 460070 624620 463340 646810 650760 537050 846450 597930 680480 957560 848800 713270 703090 919980 660830 678990 1027600 842840 444940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1185700000 29110 986 27345 54690;54691 44149 44149 1 9606 Homo sapiens 0.0665421547682854 VKPFVVR Unmodified 843.53306 0.53305825 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 1 6 0.816 1 1 1 43.942 44.026 3 0.02516 11205 20230619_1886_Aki_TMTPro18x_K_F6 79.146 60.415 739480 622840 690130 783540 908260 956670 924260 911580 1016300 793330 871900 830490 843470 728340 949090 906160 880410 735950 683530 571490 709060 780230 926320 953230 933530 931160 1023800 809620 900220 838480 866840 763680 959160 898530 842030 701340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1215700000 29111 874 27346 54692;54693;54694 44150 44150 1 9606 Homo sapiens 0.10503304210567421 VKPNIFSYMGTK Unmodified 1383.7221 0.72205759 2443 B3KY42;Q96PZ0;Q96PZ0-2;B3KRB2;E7EUH7 PUS7 Pseudouridylate synthase 7 homolog yes no 0 0 1 6 0 1 57.563 57.632 3 0.00019655 17118 20230619_1886_Aki_TMTPro18x_K_F6 105.19 85.613 68987 59366 61332 66516 62778 65854 71523 68114 73129 73046 72411 66144 78643 69275 81931 93923 80407 71308 63753 54407 62991 66602 65307 66725 71660 69575 74403 73355 74588 67646 80239 72618 83236 92694 76885 68001 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77074000 29112 2443 27347 54695 44151 44151 1 9606 Homo sapiens 0.045545439310444635 VKPQPPLSDAYLSGMPAK Oxidation (M) 1913.9921 0.99208444 731 P46379-3;P46379;P46379-2;A0A7I2V508;A0A0G2JK23;A0A024RCR6;A0A1U9X7A6;A0A1U9X7A9;A0A7P0MQS5;P46379-5;A0A0G2JL47;P46379-4;H0Y710;H0Y4L1 BAG6;BAT3 Large proline-rich protein BAG6 yes no 0 1 1 2 0 1 51.424 51.469 3 0.013788 15119 20230619_1881_Aki_TMTPro18x_K_F2 63.145 51.705 12764 9334.5 9262.6 12418 12375 10856 13125 12236 11665 14433 16459 14078 14546 10932 14187 18719 13652 16827 11768 8574.7 9763.8 12263 12608 11135 13144 12469 12165 14447 16563 14221 14876 11796 14431 18564 13089 15990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26216000 29113 731 27348 54696 44152 44152 443 1 9606 Homo sapiens 0.07164807685967389 VKPYLPQICGTVLWR Unmodified 1829.0022 0.002195612 3309 O75533 SF3B1 Splicing factor 3B subunit 1 yes yes 0 0 1 8 0 1 61.446 61.475 3 8.9276E-11 18403 20230619_1888_Aki_TMTPro18x_K_F8 161.82 131.77 173520 164880 179200 167160 158460 183030 199280 185430 199130 173730 161070 137710 166640 136010 167480 146940 147600 132140 160660 150930 181210 168990 167320 184000 198550 188970 201310 175150 167190 141420 169880 140980 169070 146760 141310 125720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35056000 29114 3309 27349 54697 44153 44153 1 9606 Homo sapiens 0.1208546020184258 VKVDEVGGEALGR Unmodified 1327.7096 0.70957864 2797 CON__Q3SX09;CON__P02070 yes no 0 0 1 4.5 0.5 1 1 44.879 44.94 3 0.00012755 11689 20230619_1883_Aki_TMTPro18x_K_F4 102.64 89.436 + 161780 219940 330230 265630 559810 648890 491590 445030 609090 847200 1689900 2060600 747010 969600 1672100 765300 1076700 1434700 151500 201440 324700 269450 561390 622320 503710 479770 655320 870330 1645400 1997000 837230 1023500 1646400 812910 1038400 1354300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3369899999.9999995 29115 2797 27350 54698;54699 44154 44154 1 9606 Homo sapiens 0.05883223792375247 VKVEPAVDTSR Unmodified 1199.651 0.65100113 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 1 6 0 1 38.876 38.959 3 0.025751 9168 20230619_1886_Aki_TMTPro18x_K_F6 61.532 45.279 85016 69847 86968 93180 87157 95281 111850 103690 104770 111240 124570 100820 112570 87115 120560 88682 97159 68256 78629 64134 88242 92213 91113 96371 111120 105570 107910 111660 126230 102390 115530 90411 120980 88090 92987 65153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194690000 29116 3299 27351 54700 44155 44155 1 9606 Homo sapiens 0.05916167217878865 VKVEPSHDASK Unmodified 1195.6197 0.619701 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 1 6.5 0.5 1 1 34.588 34.649 4 4.1352E-05 7482 20230619_1886_Aki_TMTPro18x_K_F6 141.37 90.279 62873 33521 100100 89864 197040 177700 118290 139230 75057 74669 131000 114070 62502 64838 168310 26915 61595 43514 58295 31179 99929 87141 194350 172090 122620 143040 81123 80041 128870 112320 70902 66423 162610 29088 59840 41220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121820000 29117 3484 27352 54701;54702 44156 44156 1 9606 Homo sapiens 0.029715941837821447 VKVETYNDESR Unmodified 1338.6416 0.64155866 3514 P27694;I3L4R8 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes no 0 0 1 3.5 0.5 1 1 37.966 38.014 3 3.7875E-05 8755 20230619_1882_Aki_TMTPro18x_K_F3 138.02 115.44 193280 152530 188410 185630 282430 263870 237350 249720 279260 233070 271450 252630 246690 211880 262690 197430 243860 161230 178640 139940 193150 185810 284390 260670 243210 255520 281700 237100 277710 254170 253280 219040 265400 196920 232930 153820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 307910000 29118 3514 27353 54703;54704 44157;44158 44157 2 9606 Homo sapiens -0.014216458582950509 VLAALQER Unmodified 898.52362 0.52361577 717 Q99733-2;Q99733;B4DS05;B7ZB83;B7ZAK9;A0A024RCC9;A0A2U9QGI0;C9JZI7;A0A994J3W0;B7ZAC7;A0A0J9YXQ2;C9J6D1;E9PKT8;A8MXH2;E9PNJ7;E9PS34;E9PJJ2;E9PNW0;E9PP22;E9PKI2;C9J1B1 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 0 0 0 7.5 0.5 1 1 50.567 50.645 2 0.0042839 13846 20230619_1887_Aki_TMTPro18x_K_F7 116.9 77.931 1030900 876220 901900 1022600 973870 1272300 1060800 983730 1364200 877550 1009400 811650 900310 729110 1022800 1018600 1092300 896700 952460 803360 928990 1023700 1010600 1260600 1073400 1022400 1356600 891920 1046500 825480 928210 770190 1041600 1012100 1043100 853700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1753299999.9999998 29119 717 27354 54705;54706 44159;44160 44159 2 9606 Homo sapiens 0.07029491134369437 VLAAVYK Unmodified 762.46398 0.46397563 3378;26 P04075;V9HWN7;J3KPS3;P04075-2;H3BQN4;H3BPS8;A0A0M4FNU3;A4UCS9;A4UCT0;Q8NHT3;A0A3B3IS80;A0A024R145;A8K430;P05062;A0A024QZ64;P09972;B7Z1Y2;B7Z3K9;B7Z1N6;B7Z3K7;B7Z1Z9;B7Z1L5 ALDOA;HEL-S-87p;ALDOB;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase B;Fructose-bisphosphate aldolase C no no 0 0 0 2.75 0.829 2 1 1 52.879 52.917 2;3 0.0054462 15408 20230619_1882_Aki_TMTPro18x_K_F3 140.79 13.473 2038500 1656200 1686600 1440700 2353700 3032600 2388300 2083800 2937000 681740 547990 489830 558900 514520 1046900 665140 710270 278150 1882200 1515100 1752000 1494700 2398100 2923400 2419700 2156300 2858800 763790 676040 508370 594600 537220 1035100 645830 679850 269870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 995010000 29120 3378;26 27355 54707;54708;54709;54710 44161;44162 44162 2 9606 Homo sapiens 0.07324220190992037 VLACGLNEFNK Unmodified 1263.6282 0.6281572 391 A0A024R6D1;A0A7I2V5R1;Q8TD19;G3V5V0;A0A7I2V454 NEK9 Serine/threonine-protein kinase Nek9 yes no 0 0 0 1 0 1 57.734 57.734 3 0.015031 17567 20230619_1880_Aki_TMTPro18x_K_F1 64.73 49.528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29121 391 27356 54711 44163 44163 1 9606 Homo sapiens 0.006888248287623355 VLADHAR Unmodified 780.42424 0.42423608 1637 P49588;H3BPK7;A0A6Q8PGN5;P49588-2;A0A6Q8PFY2;A0A6Q8PF33;A0A6Q8PGE8;A0A6Q8PGR9;A0A6Q8PFK3;A0A6Q8PHJ2;A0A6Q8PH44;A0A6Q8PHP7;A0A6Q8PHP3;A0A6Q8PF77;A0A6Q8PG28 AARS Alanine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0 1 29.354 29.428 2 0.068769 5483 20230619_1885_Aki_TMTPro18x_K_F5 77.748 33.138 12036 5134.2 16546 16695 19654 22322 15798 20421 14992 10214 18527 18859 14805 13042 21398 6911.5 19564 19198 11130 4804.1 16480 15959 20054 22071 16151 20710 15433 11130 18696 18549 15539 13332 21460 7778.7 18734 18106 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6926900 29122 1637 27357 54712 44164 44164 1 9606 Homo sapiens 0.025240932402766703 VLADLGR Unmodified 742.43374 0.43373813 1672 A0A7P0PJI2;A0A7I2V5K0;P61011;G3V480;A0A7I2V584;A0A7I2V5S0;G3V346;G3V3L9;A0A7I2V591 SRP54 Signal recognition particle 54 kDa protein yes no 0 0 0 6.5 0.5 1 1 48.538 48.621 2 0.06021 13298 20230619_1886_Aki_TMTPro18x_K_F6 81.613 28.038 369180 304380 345180 375310 391550 452800 394440 398070 510340 422930 397360 342990 433420 356400 295570 463440 489600 452140 341200 279250 353550 374170 403520 450680 401050 411020 508770 423980 414000 352620 434850 373010 314600 462820 466310 429700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 376140000 29123 1672 27358 54713;54714 44165 44165 1 9606 Homo sapiens 0.052218615258084355 VLADPSDDTK Unmodified 1059.5084 0.50841922 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0;A0A075B730;P58107 PLEC;PLEC1;EPPK1 Plectin;Epiplakin yes no 0 0 0 2 0 1 45.813 45.894 2 0.017782 12535 20230619_1881_Aki_TMTPro18x_K_F2 90.906 63.577 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29124 3921 27359 54715 44166 44166 1 9606 Homo sapiens -0.01895465244137995 VLAFLSSVAGDALTR Unmodified 1518.8406 0.84059282 2863 E1NZA1;Q92616;A0A024RBS1 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 5.5 0.5 1 1 66.916 66.958 3 0.08087 21149 20230619_1886_Aki_TMTPro18x_K_F6 37.555 22.583 6743 6126.9 9834.2 5912.8 11637 8696.5 10184 10518 9872.6 6753.2 8063.6 6942 8261.2 8093.3 11775 7456.1 5819 8893.9 6263.1 5606.9 9731.3 6041 11861 8637.8 10346 10511 9995.7 7036.6 8369.7 7087.1 8592.7 8275 11560 7598.3 5646.4 8421 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8452700 29125 2863 27360 54716;54717 44167 44167 1 9606 Homo sapiens 0.10192614440438774 VLAGETLSVNDPPDVLDR Unmodified 1908.9793 0.97927114 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;Q59GP7;K7EKJ9;K7EQR9 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 3 0.816 1 1 1 60.782 60.796 3 9.631E-60 18747 20230619_1882_Aki_TMTPro18x_K_F3 223.34 196.37 105590 94130 104710 108910 98687 120330 108730 117260 129240 118870 114700 118410 128430 108570 117530 129030 128130 138780 97680 86282 106390 108950 103370 120730 109730 120020 129940 120050 119000 119900 130140 113430 120350 129840 122560 131670 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 487050000 29126 3823 27361 54718;54719;54720 44168;44169;44170;44171 44169 4 9606 Homo sapiens 0.06114067827411418 VLAGLIR Unmodified 740.49086 0.49085908 1320 J3KTD2;A0A1W2PQI7;Q86VV8-2;Q86VV8-4;Q86VV8-3;Q86VV8 RTTN Rotatin yes no 0 0 0 5 0.816 1 1 1 55.933 55.982 2 0.0073257 16238 20230619_1885_Aki_TMTPro18x_K_F5 126.07 0 1344000 1263700 1028200 1012400 1255000 3387300 273920 3295500 510330 184950 298730 205990 215220 204640 673510 312990 337900 212430 1241500 1154800 1075400 1075600 1277500 3236300 280640 3277300 498190 351890 312970 211700 244080 216570 656250 308340 325680 203290 3 3 3 3 3 3 2 3 3 3 3 3 3 3 3 3 3 3 2461100000 29127 1320 27362 54721;54722;54723 44172;44173 44173 2 9606 Homo sapiens 0.11023328802173182 VLAGQTLDINMAGEPKPDRPK Unmodified 2249.1838 0.18380139 2053 Q5QPL9;A8K4T9;Q53GL6;Q9UKM9-2;Q9UKM9;Q5QPM1;B4DSJ1 RALY RNA-binding protein Raly yes no 0 0 2 4.5 3.5 1 1 51.878 51.917 4;5 1.179E-16 14350 20230619_1888_Aki_TMTPro18x_K_F8 165.3 126.88 148250 130730 149970 145400 139420 161370 168910 159290 176330 179910 176140 181760 196250 155270 174840 200120 183840 201280 137160 119790 152030 145920 146470 161950 168840 163440 179280 180750 181660 183540 198560 163480 178810 200370 175930 191100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 415330000 29128 2053 27363 54724;54725 44174;44175 44175 2 9606 Homo sapiens 0.10917683646312071 VLAGQTLDINMAGEPKPDRPK Oxidation (M) 2265.1787 0.17871601 2053 Q5QPL9;A8K4T9;Q53GL6;Q9UKM9-2;Q9UKM9;Q5QPM1;B4DSJ1 RALY RNA-binding protein Raly yes no 0 1 2 8 0 1 48.281 48.348 4 3.7104E-08 12818 20230619_1888_Aki_TMTPro18x_K_F8 112.56 102.77 134440 109580 106570 112620 131310 120510 145050 145970 120270 127010 176290 130560 146090 129160 132920 157200 139050 151710 124100 100370 110970 113690 134590 121960 144720 146830 126090 129430 176600 132620 149420 134730 135880 157140 133070 144110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 383940000 29129 2053 27363 54726 44176 44176 1288 1 9606 Homo sapiens 0.09673379783725977 VLAIAQNFV Unmodified 973.55967 0.55966693 750 A0A024RD78;Q6P1L8 MRPL14 39S ribosomal protein L14, mitochondrial yes no 0 0 0 2.5 0.5 1 1 66.005 66.012 2 0.015748 21231 20230619_1881_Aki_TMTPro18x_K_F2 74.743 63.869 5531.5 5384.8 4497.6 5667.7 6677.6 7226.5 5917.9 6507.6 8032 4102.3 6161.7 5623.1 4639.3 5380.5 6295.6 5851.7 3215.3 4755.5 5113 4930.1 4694.5 5721.2 6748.6 7174.3 6074.5 6632.4 7971.3 4329.7 6342.1 5639.3 4868.6 5572.8 6201.5 5814.6 3116.8 4522.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17804000 29130 750 27364 54727;54728 44177;44178 44177 2 9606 Homo sapiens 0.07182948311242399 VLAINILGR Unmodified 967.61785 0.61785051 1171 O43747-2;O43747;B3KXW5;A0A140VJE7;Q8IY97;B4DS96;B4DDL1 AP1G1 AP-1 complex subunit gamma-1 yes no 0 0 0 6 0 1 61.438 61.493 2 0.0079752 18760 20230619_1886_Aki_TMTPro18x_K_F6 104.21 73.597 123250 96661 108280 119510 101610 102020 130260 133980 133630 137780 138540 145730 142230 125190 117400 157280 157470 154850 113820 88700 111210 118630 106770 105260 129810 134770 136170 139210 142100 146890 143930 131490 122250 157280 150260 147110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185150000 29131 1171 27365 54729 44179 44179 1 9606 Homo sapiens 0.1327462995653832 VLAMSGDPNYLHR Unmodified 1471.7242 0.72418285 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6;B4E1Q0;E9PH38 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 4.5 3.5 1 1 48.244 48.273 3 6.7304E-28 12771 20230619_1888_Aki_TMTPro18x_K_F8 243.85 222.9 80507 68716 77296 94297 68792 88851 88199 78115 85944 95943 87398 101530 98467 82435 98598 105760 111240 103800 74438 63106 78783 93005 72731 89971 87732 81093 87815 96159 90217 102120 100160 86897 100990 105780 106260 98637 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 441720000 29132 1860 27366 54730;54731 44180;44181 44181 2 9606 Homo sapiens 0.007189726688693554 VLAMSGDPNYLHR Oxidation (M) 1487.7191 0.71909747 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6;B4E1Q0;E9PH38 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 1 0 7 0.816 1 1 1 42.916 42.977 3 1.5732E-06 10478 20230619_1887_Aki_TMTPro18x_K_F7 137.88 122.34 142820 98262 113830 134470 124380 132510 139560 129890 162780 143860 158800 145540 158760 131010 150610 152150 153840 160390 131710 90316 118320 132750 128820 134080 140520 133310 164290 144740 163030 147240 161610 136770 153480 153020 147200 152220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 291800000 29133 1860 27366 54732;54733;54734 44182;44183 44182 1189 2 9606 Homo sapiens -0.005253311937394756 VLANPGNSQVAR Unmodified 1224.6575 0.65748349 3904 Q14974;B2RBR9;J3QR48 KPNB1 Importin subunit beta-1 yes no 0 0 0 4.5 3.04 1 1 1 1 39.31 39.327 2 4.2356E-18 9744 20230619_1880_Aki_TMTPro18x_K_F1 239.54 183.99 337760 265560 308890 304160 334520 357030 336400 321030 414080 375160 420670 408740 430580 366070 380270 451410 483210 431640 312020 243510 316500 304780 345580 356300 341500 331940 417600 377420 431600 412150 436860 383480 393620 450960 460980 410380 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1507299999.9999998 29134 3904 27367 54735;54736;54737;54738 44184;44185;44186;44187 44184 4 9606 Homo sapiens 0.05414105169279537 VLAPELIPSILEK Unmodified 1420.8541 0.85411762 3620 P50748;E7ES84;B4E0D8 KNTC1 Kinetochore-associated protein 1 yes no 0 0 0 1 0 1 64.628 64.628 3 0.0038345 20368 20230619_1880_Aki_TMTPro18x_K_F1 71.241 49.155 39566 38783 40226 44260 34751 41431 36398 43335 46259 52278 52762 50077 57129 44382 49759 51844 50894 63136 36636 35533 40747 44223 36613 42160 36953 44365 46864 52271 53993 50745 57779 46411 50806 52601 48769 59802 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12581000 29135 3620 27368 54739 44188 44188 1 9606 Homo sapiens 0.16052472219666925 VLAPILPDNFSTPTGSR Unmodified 1783.9468 0.9468488 2374 B3KPD3;Q9NQS7-2;Q9NQS7 INCENP Inner centromere protein yes no 0 0 0 2 0.816 1 1 1 62.044 62.057 3 0.00031512 19665 20230619_1881_Aki_TMTPro18x_K_F2 56.959 37.761 45687 43334 39983 49428 42459 58483 47203 52226 64278 59285 50018 57419 68125 60276 51931 68020 67117 74477 42244 39707 41201 49527 44171 58285 47845 53955 63980 59511 52818 58456 68224 62501 54019 68541 64121 70644 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 595420000 29136 2374 27369 54740;54741;54742 44189 44189 1 9606 Homo sapiens 0.08623325215057775 VLAPQISFAPEIASEEERK Unmodified 2113.1055 0.10553429 64 Q5TD07;B3KPX6;A0A024QZT9;P16083 NQO2 Ribosyldihydronicotinamide dehydrogenase [quinone] yes no 0 0 1 5 0 1 59.626 59.68 3 0.050429 17762 20230619_1885_Aki_TMTPro18x_K_F5 42.633 25.352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29137 64 27370 54743 44190 44190 1 9606 Homo sapiens 0.09350574332711403 VLAQNSGFDLQETLVK Unmodified 1760.9309 0.93086439 765;2549 Q59ET3;B2R9K8;A0A024RDL1;P40227;A1JUI8;B4DPJ8;P40227-2;B4DN39 CCT6A T-complex protein 1 subunit zeta no no 0 0 0 7.5 0.5 1 1 61.952 61.991 2;3 4.1247000000000003E-78 18635 20230619_1888_Aki_TMTPro18x_K_F8 326.81 286.08 352010 301980 327770 380830 311500 367360 375510 369320 395860 424040 419340 426500 454060 391330 403430 482900 441550 464070 325410 277080 335090 377900 326770 372490 375600 378720 403270 425630 430720 431730 459950 409630 413680 482530 422260 440890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3623699999.9999995 29138 765;2549 27371 54744;54745 44191;44192 44192 2 9606 Homo sapiens 0.08083618978162121 VLAQYYTVTDEHHR Unmodified 1730.8376 0.8376327 4620 Q9NX58;A8K3Y5 LYAR Cell growth-regulating nucleolar protein yes no 0 0 0 5.5 0.5 1 1 44.179 44.265 4 9.0945E-09 11350 20230619_1886_Aki_TMTPro18x_K_F6 128.54 118.49 46990 37316 48236 45260 49584 63384 61437 50377 74441 58921 54208 49166 63344 54681 52908 59810 62389 71082 43452 34234 48920 45294 51791 62398 61610 52603 74263 58863 56931 50559 63887 56528 54547 60628 59662 67363 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168340000 29139 4620 27372 54746;54747 44193 44193 1 9606 Homo sapiens 0.001447393156013277 VLATAFDTTLGGR Unmodified 1320.7038 0.70376498 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;O14992;Q7KYN0 HSPA4;HEL-S-5a;HS24/p52;HS24/P52 Heat shock 70 kDa protein 4 yes no 0 0 0 1.5 0.5 1 1 61.359 61.365 3 8.7102E-11 19174 20230619_1881_Aki_TMTPro18x_K_F2 170.4 142.19 74581 67027 64623 80589 59672 81405 85402 81093 85027 104350 93844 85260 89828 80926 91846 96000 85966 94185 68929 61459 66531 80272 63188 82219 84597 83493 87077 103600 95658 87271 91916 84419 93064 96122 82365 89447 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 632090000 29140 3544 27373 54748;54749 44194 44194 1 9606 Homo sapiens 0.05624125280678527 VLATQPGPGR Unmodified 994.55598 0.55597854 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9;B3KY97;B3KPQ2;A0A087X0G0 RRP12 RRP12-like protein yes no 0 0 0 1 0 1 38.654 38.654 2 0.053627 9505 20230619_1880_Aki_TMTPro18x_K_F1 80.455 52.93 104210 88026 104880 91237 110880 130030 118980 120130 150780 115790 145220 152900 151360 135190 119810 144980 160190 171040 96384 80623 106510 92463 115020 128320 120490 123260 151430 118460 149530 152960 152860 140540 124750 146920 152960 162140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83259000 29141 2355 27374 54750 44195 44195 1 9606 Homo sapiens 0.05848278537382612 VLATVTKPVGGDK Unmodified 1283.7449 0.74490152 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3;F8VZ45;U3KQR5;F8VZA3;F8VWR1;F8VU16 RPL6 60S ribosomal protein L6 yes no 0 0 1 2.33 0.471 2 1 49.178 49.245 3;4 1.1461E-07 13755 20230619_1882_Aki_TMTPro18x_K_F3 148.89 121.73 1623900 1281500 1461100 1552400 1568300 1775000 1741600 1604900 1787900 1836300 1835600 1802700 2111600 1589200 1626200 2082000 1865600 1570500 1500000 1175700 1500100 1548500 1625700 1774200 1747300 1657900 1821600 1842400 1892500 1824900 2121900 1672500 1677800 2054600 1780700 1498200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7460699999.999999 29142 680 27375 54751;54752;54753 44196;44197;44198 44198 3 9606 Homo sapiens 0.1143788632016367 VLAVNQENEQLMEDYEK Oxidation (M) 2066.9467 0.94665039 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;G3V2N5;G3V2W4 ACTN1 Alpha-actinin-1 yes no 0 1 0 1 0 1 54.708 54.708 3 5.9244E-07 16313 20230619_1880_Aki_TMTPro18x_K_F1 117 108.05 19679 15874 19883 21883 19768 17962 23700 23524 25733 26581 25214 23922 30764 24231 24861 29435 26083 30321 18196 14582 20189 21557 20614 18596 23732 23732 26094 26614 26126 24427 30927 25276 25478 29531 24974 28774 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49057000 29143 387 27376 54754 44199 44199 248 1 9606 Homo sapiens -0.044145073576601135 VLAVNQENEQLMEDYEK Unmodified 2050.9517 0.95173576 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4;G3V2N5;G3V2W4 ACTN1 Alpha-actinin-1 yes no 0 0 0 3 1.41 1 1 1 1 1 59.682 59.701 3 2.0674E-18 18203 20230619_1883_Aki_TMTPro18x_K_F4 177.74 165.82 68589 50734 67867 64290 51324 61667 73466 70864 74072 85906 81082 80054 98638 73560 85267 98576 88865 95490 63378 46579 68743 63808 55235 62757 72833 72164 75773 85801 83628 81340 99402 77471 87214 98442 85037 90705 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 472810000 29144 387 27376 54755;54756;54757;54758;54759 44200;44201 44201 2 9606 Homo sapiens -0.0317020349507402 VLCELADLQDK Unmodified 1302.649 0.64895222 3470 P17987;E7ERF2;F5H136;F5GZI8;F5H726;F5H676 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 3.8 0.748 2 2 1 62.447 62.47 2;3 4.1373E-05 19018 20230619_1885_Aki_TMTPro18x_K_F5 133.89 92.249 1155000 885170 1065200 1154600 948790 1144000 1086700 1102900 1194800 1265000 1278300 1172700 1468300 1160600 1260100 1682000 1380200 1431200 1066900 812790 1088400 1143600 999470 1156300 1091600 1134000 1215100 1267000 1315200 1195700 1482100 1225300 1294000 1666500 1319800 1361800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4676200000 29145 3470 27377 54760;54761;54762;54763;54764 44202;44203 44203 2 9606 Homo sapiens 0.009733704177506297 VLCGGDIYVPEDPK Unmodified 1560.7494 0.74939455 2459 B4DE91;P49189;B4DX14;P49189-3;P49189-2;B4DYY1 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 4 0 1 57.834 57.838 2 0.00015395 17432 20230619_1883_Aki_TMTPro18x_K_F4 127.4 101.35 15274 14462 16497 15701 17257 20421 18099 18722 19139 20944 22211 24088 22838 19529 23172 21127 25522 25841 14146 13245 16665 15825 17893 20253 18241 19297 19572 21137 22689 24145 23305 20385 23674 21476 24399 24493 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9858500 29146 2459 27378 54765 44204 44204 1 9606 Homo sapiens -0.008550173192361399 VLCIINPGNPTGQVQSR Unmodified 1851.9625 0.96251564 408 A0A024R6R2;Q8TD30-2;Q8TD30 GPT2 Alanine aminotransferase 2 yes no 0 0 0 5 0 1 57.002 57.064 3 0.00037913 16712 20230619_1885_Aki_TMTPro18x_K_F5 73.597 57.198 48227 32174 45414 57629 48350 51496 46128 48619 64093 62001 66036 62282 64118 53402 55296 71797 69182 76844 44521 29678 46476 55967 49956 52445 47212 50242 64357 61962 67533 62942 65087 56370 57245 72079 66112 72905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137960000 29147 408 27379 54766 44205 44205 1 9606 Homo sapiens 0.07061288460454307 VLCLAVAVGHVK Unmodified 1264.7326 0.73256269 3732 P62906;Q1JQ76;A0A024RCW3 RPL10A 60S ribosomal protein L10a;Ribosomal protein yes no 0 0 0 6 0 1 57.849 57.918 3 0.00014516 17272 20230619_1886_Aki_TMTPro18x_K_F6 105.17 90.907 57652 50324 60998 59769 63667 59242 61351 64773 65007 63079 63332 58146 58417 55148 62519 67747 60596 58307 53357 46143 61699 59606 65757 60112 62142 65736 65968 63684 64825 59186 60007 57617 63426 67342 57981 55489 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 939630000 29148 3732 27380 54767 44206 44206 1 9606 Homo sapiens 0.11078571376128821 VLCLSQSEGR Unmodified 1147.5656 0.56555694 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 0 7 0 1 45.6 45.688 2 0.00078313 11638 20230619_1887_Aki_TMTPro18x_K_F7 117.31 70.23 66063 48550 60370 59887 63898 74221 70809 67346 80152 76632 80797 79208 89344 72213 76277 79937 89109 78854 61004 44562 61857 59743 66327 73798 71281 69522 81156 77046 83224 80058 90274 75146 78515 80146 85064 74945 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75451000 29149 1532 27381 54768 44207 44207 1 9606 Homo sapiens -0.0023232123942307226 VLCQGLK Unmodified 816.45276 0.45275902 1206 A0A140VJT8;P13489;A0A024RC87;E9PIM9 RNH1 Ribonuclease inhibitor yes no 0 0 0 2 0 1 47.653 47.724 2 0.006541 13406 20230619_1881_Aki_TMTPro18x_K_F2 132.22 48.372 330310 293420 303060 295480 427330 546410 428450 438030 687910 111700 102670 97328 108190 72321 230960 129600 143590 97481 305390 268630 312110 301620 435220 530780 439290 446000 660880 131180 133300 98990 116210 78506 227290 127840 137910 93097 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231620000 29150 1206 27382 54769 44208 44208 1 9606 Homo sapiens 0.037190748251987316 VLCYYGSQEER Unmodified 1402.6187 0.61871473 4516 Q9H4L7;Q9H4L7-2;Q9H4L7-3 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 0 0 0 4.5 0.5 1 1 47.532 47.591 2 0.0069299 12758 20230619_1885_Aki_TMTPro18x_K_F5 99.688 81.527 22232 17363 19000 24720 23381 25703 20016 26011 24183 27904 27304 29757 28759 26824 24879 35217 32017 30743 20527 15957 19666 24359 23864 25917 20528 26587 24555 28144 27944 30031 29145 28190 25818 34974 30556 29252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84792000 29151 4516 27383 54770;54771 44209 44209 1 9606 Homo sapiens -0.06648988247388843 VLDALFPCVQGGTTAIPGAFGCGK Unmodified 2435.1977 0.19773689 3566 P38606-2;P38606;A0A994J738 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 0 4 0 1 65.303 65.312 4 5.7094E-05 20538 20230619_1883_Aki_TMTPro18x_K_F4 77.847 69.055 9754.7 8876.7 8742 10702 6212.3 8334 9568.4 9646.5 11694 13046 10982 13215 13924 11142 10980 14056 13547 15742 9018.4 8139.2 8940.7 10628 6759.7 8635.9 9520.4 9858.9 11776 13004 11443 13328 13975 11723 11377 14162 12952 14926 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14476000 29152 3566 27384 54772 44210 44210 1 9606 Homo sapiens 0.03754593083021973 VLDASWYSPGTR Unmodified 1350.6568 0.65681479 1461 Q53EW8;A0A384NKQ2;Q16762;B4DVZ4;B1AH48 TST Sulfurtransferase;Thiosulfate sulfurtransferase yes no 0 0 0 1 0 1 56.425 56.425 2 3.7376E-13 17016 20230619_1880_Aki_TMTPro18x_K_F1 213.25 182.18 71357 67570 74509 83408 100670 113030 107770 110970 124750 98242 98064 88375 102260 86789 93775 107400 103740 109760 66070 61963 75899 83313 102700 111980 108720 113110 125000 99723 101990 90188 103850 90691 96134 107690 99205 104200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29560000 29153 1461 27385 54773 44211;44212 44212 2 9606 Homo sapiens -0.004487342704578623 VLDDGELLVQQTK Unmodified 1456.7773 0.77732386 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;Q96D47;D3DXJ4 NSF Vesicle-fusing ATPase yes no 0 0 0 4 0 1 60.343 60.346 3 5.0668E-06 18446 20230619_1883_Aki_TMTPro18x_K_F4 125.82 112.62 66032 63143 72944 60888 74444 69146 75571 80250 81133 74122 74197 76539 82916 71970 81779 86724 73155 87232 61175 57774 73456 61878 77109 69622 76338 81019 82075 75308 76872 77462 84293 75166 82736 86930 70175 82797 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 192540000 29154 1435 27386 54774 44213 44213 1 9606 Homo sapiens 0.06720628932521322 VLDEFSK Unmodified 836.42798 0.42798405 1655 A0A7I2V3A1;Q9UES0;A0A7I2V4L6;B5BU81;A4D2J0;A0A7I2V3V7;O15498-2;O15498 YKT6 Synaptobrevin homolog YKT6 yes no 0 0 0 4.5 0.5 1 1 54.581 54.623 2 0.048736 15706 20230619_1885_Aki_TMTPro18x_K_F5 86.794 38.29 345980 278720 317390 355710 341880 386820 394390 375310 462670 383710 399560 391430 439850 355410 379030 454750 440910 463700 319670 255820 325440 353260 354790 388480 396600 384510 464760 387760 414600 396000 444700 373180 390330 455640 421420 440240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 245890000 29155 1655 27387 54775;54776 44214;44215 44215 2 9606 Homo sapiens 0.0032271822348093337 VLDELTLTK Unmodified 1030.591 0.59102664 1272 P13645;CON__P13645;A0A1B0GVI3 KRT10 Keratin, type I cytoskeletal 10 yes no 0 0 0 6.5 0.5 1 1 61.348 61.395 3 9.1508E-05 18721 20230619_1886_Aki_TMTPro18x_K_F6 123.35 62.382 + 98446 98839 164880 109780 1912000 181810 191780 182900 233360 129730 138430 169880 169780 524630 175080 148150 154520 191480 91668 90529 184920 111070 1786400 183880 294080 185290 234010 135900 148180 182520 175130 507860 176660 157780 148300 181270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 928780000 29156 1272 27388 54777;54778 44216;44217 44216 2 9606 Homo sapiens 0.07695476554636116 VLDFDVK Unmodified 834.44872 0.4487195 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;H0Y659;Q5H935;Q53FW4 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 5 0.816 1 1 1 58.818 58.859 2 0.023523 17315 20230619_1885_Aki_TMTPro18x_K_F5 100.45 55.139 249940 212320 233630 234180 226630 257950 248060 247200 254950 268230 288860 287260 292620 246030 293590 292300 299590 295610 231040 194570 238580 235120 236600 258840 249190 253860 260770 270490 295000 289390 298530 257600 298850 293210 286560 280750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 561530000 29157 594 27389 54779;54780;54781 44218;44219 44218 2 9606 Homo sapiens 0.02487308603144811 VLDFEHFLPMLQTVAK Oxidation (M) 1902.9914 0.99135615 2989 F8W1R7;P60660-2;P60660;G3V1V0;B7Z6Z4;J3KND3;G8JLA2;F8VPF3;G3V1Y7;Q6IBG5;F8W180;F8VZU9 MYL6 Myosin light polypeptide 6 yes no 0 1 0 2 0 1 63.925 63.934 3 0.00020868 20371 20230619_1881_Aki_TMTPro18x_K_F2 87.148 69.231 31693 26017 34142 37788 35689 39920 42822 37644 38563 38086 43929 42430 47238 38258 36139 43963 45277 48241 29325 23912 34531 37206 37114 40141 42626 38650 39737 38600 44947 42753 47568 39918 37492 44304 43253 45763 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10787000 29158 2989 27390 54782 44220 44220 1770 1 9606 Homo sapiens 0.07598013036886186 VLDFEHFLPMLQTVAK Unmodified 1886.9964 0.99644153 2989 F8W1R7;P60660-2;P60660;G3V1V0;B7Z6Z4;J3KND3;G8JLA2;F8VPF3;G3V1Y7;Q6IBG5;F8W180;F8VZU9 MYL6 Myosin light polypeptide 6 yes no 0 0 0 3 0 1 65.208 65.242 3 8.2823E-15 20638 20230619_1882_Aki_TMTPro18x_K_F3 185.67 172.25 49132 45172 46395 47093 43212 50891 52443 49493 59050 50454 47752 44500 59775 48762 45055 49962 46736 56131 45445 41363 47320 47479 45419 51155 52540 50691 59326 50788 50020 45601 59910 50254 46195 50522 44766 53214 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45187000 29159 2989 27390 54783 44221 44221 1 9606 Homo sapiens 0.08842316899517755 VLDIIYQPQAIFR Unmodified 1574.8821 0.8820637 2638 B4E303;B4E074;Q9NVX2;A0A0A0MRH0;K7ERN7 NLE1 Notchless protein homolog 1 yes no 0 0 0 3.5 0.5 1 1 64.752 64.772 3 0.024956 20344 20230619_1883_Aki_TMTPro18x_K_F4 54.772 31.167 7630.4 5691.8 6106.4 7135.7 5956.9 5306.2 8444.7 7128.2 7269.4 6431.3 6893.7 7649.6 6317.2 6750.4 8212.4 5278.2 6997.9 7210.8 7040.1 5224.8 6333.8 7065.3 6254.4 5550.1 8330 7145.2 7452.4 6572.8 7076.9 7673.2 6563.6 6911 8234.1 5447 6708.8 6827.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12744000 29160 2638 27391 54784;54785 44222 44222 1 9606 Homo sapiens 0.1176179519973175 VLDILKK Unmodified 827.54804 0.54803961 4650 Q9UBB4;A0A1W2PQD2;Q7Z524 ATXN10 Ataxin-10 yes no 0 0 1 4 0 1 56.336 56.345 3 0.0069359 16795 20230619_1883_Aki_TMTPro18x_K_F4 87.616 22.364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29161 4650 27392 54786 44223 44223 1 9606 Homo sapiens 0.1273675128790046 VLDLAEQV Unmodified 885.48075 0.48074791 4084 Q5W009;Q96I25 RBM17 Splicing factor 45 yes no 0 0 0 2 0 1 63.516 63.524 2 0.01014 20192 20230619_1881_Aki_TMTPro18x_K_F2 94.163 89.308 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29162 4084 27393 54787 44224 44224 1 9606 Homo sapiens 0.03342676286297319 VLDLDLFR Unmodified 989.55458 0.55458155 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 0 7 0 1 63.611 63.643 2 1.4819E-09 19485 20230619_1887_Aki_TMTPro18x_K_F7 178.08 35.447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29163 3609 27394 54788 44225 44225 1 9606 Homo sapiens 0.05938644448622199 VLDLQQIK Unmodified 955.57023 0.57023162 179 Q53GN6;A0A024R201;Q9UNM6;J3KNQ3;B2RBM7;Q9Y6E3;Q9UNM6-2;B4DJ66 PSMD13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 8 0 1 56.876 56.933 2 0.0024445 16538 20230619_1888_Aki_TMTPro18x_K_F8 142.64 83.825 238760 215340 217040 230740 247040 321910 278380 272160 333530 209280 174460 162340 188130 161810 225960 204740 190110 166580 220750 197240 222910 232990 255580 317360 280400 279720 330020 213760 187130 167030 193430 169180 227000 203010 182080 158710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152400000 29164 179 27395 54789 44226 44226 1 9606 Homo sapiens 0.09066930965650499 VLDLVEVLVTK Unmodified 1226.7486 0.74858991 4412 Q9BQG0;Q9BQG0-2;I3L1L3 MYBBP1A Myb-binding protein 1A yes no 0 0 0 2 0 1 67.279 67.285 2 0.00027991 21710 20230619_1881_Aki_TMTPro18x_K_F2 113.22 91.071 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29165 4412 27396 54790 44227 44227 1 9606 Homo sapiens 0.14428556094048872 VLDNAIETEK Unmodified 1130.5819 0.58191851 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 51.491 51.546 3 0.0014432 15158 20230619_1881_Aki_TMTPro18x_K_F2 90.05 56.962 313460 259950 259480 297570 308170 338330 320470 321400 366650 323950 350590 412380 400390 332060 329380 413150 414690 429140 289460 238310 269050 297980 316740 338700 323810 329620 370230 329990 363020 411830 403730 349450 341360 414520 396050 407370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 327990000 29166 2337;3778;3779 27397 54791;54792 44228;44229 44228 2 9606 Homo sapiens 0.021850831983556418 VLDNYLTSPLPEEVDETSAEDEGVSQR Unmodified 2991.3833 0.38328487 1305 A0A1U9X8Y4;Q5SRT3;Q53FB0;O00299 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 yes no 0 0 0 1 0 1 62.71 62.71 3 1.0534E-29 19583 20230619_1880_Aki_TMTPro18x_K_F1 192.18 188.91 21102 16479 18002 19914 17012 21334 23968 21573 26423 23868 20708 22391 27522 24780 21775 26984 23579 27913 19483 15119 18549 19850 17962 21465 23825 22089 26555 23966 21824 22877 27612 25598 22373 27119 22573 26486 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85991000 29167 1305 27398 54793 44230 44230 1 9606 Homo sapiens -0.03275143964083327 VLDPASSDFTR Unmodified 1206.5881 0.58806652 2355 B3KMR5;Q5JTH9-2;Q5JTH9-3;Q5JTH9;B3KY97 RRP12 RRP12-like protein yes no 0 0 0 4 0 1 50.137 50.172 2 0.089486 14098 20230619_1883_Aki_TMTPro18x_K_F4 57.174 36.845 344170 242120 342330 354610 384350 435890 436480 411600 516580 477370 501010 428200 516170 430540 438300 512360 556270 505700 317950 222690 348690 349830 397450 433890 439420 423870 521020 477620 514860 437350 522690 448480 453960 512980 530740 480570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239750000 29168 2355 27399 54794 44231 44231 1 9606 Homo sapiens -0.006963985701531783 VLDPFTIK Unmodified 931.53787 0.53786886 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8;B4DVU1 HEL107;TKT Transketolase yes no 0 0 0 1 0 1 61.975 61.975 2 0.001059 19258 20230619_1880_Aki_TMTPro18x_K_F1 160.75 0 190950 144710 138750 170190 111160 194160 128260 147750 740720 302950 229700 378700 484880 441040 197100 901710 215280 692190 176090 132750 145120 170030 120220 193320 146660 158280 698360 301600 271220 383940 473610 476710 210680 884590 209100 657920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268520000 29169 3523 27400 54795 44232 44232 1 9606 Homo sapiens 0.06936143562677444 VLDPFTIKPLDR Unmodified 1412.8028 0.80275075 3523 V9HWD9;Q53EM5;P29401;P29401-2;B4E022;B3KSI4;A0A0K0K1H9;B3KPZ8;B4DVU1 HEL107;TKT Transketolase yes no 0 0 1 2 0 1 60.65 60.662 3 2.7477E-05 18905 20230619_1881_Aki_TMTPro18x_K_F2 123.92 98.602 236310 183900 224690 254190 195330 216690 212360 215230 379470 320750 347080 261010 253620 200710 323300 224600 215810 156820 218350 168960 228920 250370 206060 221930 218320 222850 375500 316850 352970 265660 264870 210300 321040 221940 207110 149880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 252310000 29170 3523 27401 54796 44233 44233 1 9606 Homo sapiens 0.11286148245631011 VLDPTCTIK Unmodified 1045.5478 0.54778161 3028 H0Y8P4;Q8TED0;Q8TED0-3;Q8TED0-2 UTP15 U3 small nucleolar RNA-associated protein 15 homolog yes no 0 0 0 7.5 0.5 1 1 51.768 51.843 3 0.021327 14400 20230619_1887_Aki_TMTPro18x_K_F7 65.224 36.498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29171 3028 27402 54797;54798 44234;44235 44234 2 9606 Homo sapiens 0.026829635057538326 VLDSFCEGLK Unmodified 1166.5642 0.56415996 2797 CON__Q3SX09 yes yes 0 0 0 6.5 0.5 2 2 60.227 60.279 2;3 5.7323E-10 18233 20230619_1886_Aki_TMTPro18x_K_F6 213.85 168.69 + 172900 213880 235030 282260 429920 578900 364680 358060 619600 522050 830150 1316800 439200 986560 486750 798010 860690 1746600 160860 196120 237020 282940 430550 557430 379210 385640 624020 543370 827770 1287600 467500 1016600 516890 856820 826020 1645700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2699400000 29172 2797 27403 54799;54800;54801;54802 44236;44237 44236 2 9606 Homo sapiens -0.012459553281814806 VLDSGAPIK Unmodified 898.51238 0.51238239 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 7 0.816 1 1 1 49 49.076 2 0.001276 13144 20230619_1887_Aki_TMTPro18x_K_F7 133.58 77.17 725540 593990 663310 792040 828170 827740 858270 879800 1017900 956650 1025500 1055300 1022400 887850 901130 1142900 1115000 1045400 670410 545410 682210 783890 847600 835610 868490 897230 1028200 965690 1051800 1061400 1038200 934510 931590 1138300 1064300 994200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1222700000 29173 3391 27404 54803;54804;54805 44238 44238 1 9606 Homo sapiens 0.059066690402460154 VLDTNDR Unmodified 831.40865 0.4086456 2973;824 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A494C1T2;A0A087WVM4;B7ZM99;Q6UB35;B2RD24 MTHFD1;MTHFD1L C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed;Monofunctional C1-tetrahydrofolate synthase, mitochondrial no no 0 0 0 2 0 1 36.468 36.526 2 0.0073584 8296 20230619_1881_Aki_TMTPro18x_K_F2 125.81 63.097 91815 39990 108700 104770 149790 136880 107070 143600 115450 85154 159650 193690 128960 132330 155810 61043 186250 180090 84780 37225 109560 100810 150920 136040 110860 144600 118720 92444 160660 189410 134020 134750 159100 69475 177860 169810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81229000 29174 2973;824 27405 54806 44239 44239 1 9606 Homo sapiens -0.013802380674178494 VLECDIIK Unmodified 988.52632 0.52631789 2142;4410 A8K9U0;Q9BWF3;E9PB51;Q9BWF3-4;D6R9K7;J3QRR5;Q9BWF3-3;Q9BWF3-2;Q9BQ04;E9PLB0;E9PM61;U3KQD5 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B no no 0 0 0 4.5 0.5 1 1 54.715 54.782 3 0.0077259 15730 20230619_1885_Aki_TMTPro18x_K_F5 82.452 18.887 102240 78421 97548 97273 96674 111000 108140 103880 117720 106350 98559 93615 117320 87362 91962 122770 109600 100350 94461 71971 99474 96879 100840 111030 108670 106680 118640 106990 102800 95469 117880 92231 95100 121460 104630 95585 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146620000 29175 2142;4410 27406 54807;54808 44240;44241 44241 2 9606 Homo sapiens 0.03159578477038849 VLECLASGIVMPDGSGIYDPCEK Oxidation (M) 2525.1488 0.14879737 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;Q12906-3;Q12906-5;Q12906-2;Q59GP7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 1 0 6 0 1 64.148 64.194 3 1.3541E-13 19987 20230619_1886_Aki_TMTPro18x_K_F6 136.14 119.07 25683 22696 23427 29094 24254 25590 29978 26193 27675 30964 34911 29262 35930 30007 26014 32859 31275 34364 23743 20825 24034 28802 25263 26162 29820 26865 28620 30983 35474 29832 36159 31089 26957 33040 29895 32612 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82575000 29176 3823 27407 54809 44242 44242 2506 1 9606 Homo sapiens -0.05277108058817248 VLEDEEGSKDIELSDDPYDCIR Unmodified 2596.1487 0.14865725 212 B2RDZ9;A0A024R2T3;Q15024 EXOSC7 Exosome complex component RRP42 yes no 0 0 1 2 0 1 57.574 57.589 3 4.851E-08 17664 20230619_1881_Aki_TMTPro18x_K_F2 101.17 98.627 18591 14504 18787 18592 14552 16004 16230 20449 18082 24306 24744 19418 24303 20380 22407 23878 22583 18181 17187 13315 18999 18415 15496 16482 16353 20672 18607 24192 25017 19986 24720 21173 22834 23621 21576 17345 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44777000 29177 212 27408 54810 44243 44243 1 9606 Homo sapiens -0.08557113253482385 VLEDSDLK Unmodified 917.47058 0.47057715 3429 V9HWB4;P11021;A0A7P0TB36 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 2 0.816 1 1 1 49.724 49.768 2 0.0024445 14359 20230619_1881_Aki_TMTPro18x_K_F2 142.64 72.377 1147500 826560 952220 1068600 1275200 1392700 1334000 1325000 1717000 1409600 1523000 1740100 1659300 1445700 1425400 1837600 2000800 1956900 1058800 759100 989250 1063300 1301500 1382000 1352800 1360400 1719000 1430800 1578900 1741500 1679200 1521500 1487500 1845700 1908500 1857500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1882099999.9999998 29178 3429 27409 54811;54812;54813 44244;44245 44244 2 9606 Homo sapiens 0.008540685610455512 VLEEANQAINPK Unmodified 1324.6987 0.69867961 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 5 0.816 1 1 1 52.743 52.801 3 2.7141E-07 15104 20230619_1886_Aki_TMTPro18x_K_F6 159.94 142.82 330590 286220 286750 328770 328020 346800 321800 326850 399290 377840 395120 414290 448270 353980 394070 487940 429710 421600 305460 262360 295770 328780 337400 348990 327260 336690 402300 380300 408020 417030 453090 374190 404160 484200 410750 401170 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2164600000 29179 1328 27410 54814;54815;54816 44246;44247;44248 44248 3 9606 Homo sapiens 0.04931821418085747 VLEEEEQRR Unmodified 1186.5942 0.59421454 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;C9J813;B4E3I0 CALD1 Caldesmon yes no 0 0 1 1 0 1 34.019 34.019 3 3.8113E-06 7593 20230619_1880_Aki_TMTPro18x_K_F1 154.56 91.022 72123 47112 67053 71614 101560 98298 89575 87412 114220 80099 104550 97870 87342 76490 78527 82513 106860 89156 66567 43366 69072 70618 102380 97122 91734 89849 114430 81952 106900 97853 89316 79909 81584 83194 101840 84675 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71613000 29180 3798 27411 54817 44249 44249 1 9606 Homo sapiens 0.008381196613754582 VLEEGSVEAR Unmodified 1087.551 0.55095274 465 Q96CT7;A0A024R7M8 CCDC124;LOC115098 Coiled-coil domain-containing protein 124 yes no 0 0 0 1.5 0.5 1 1 41.777 41.816 2 1.7077E-10 10870 20230619_1880_Aki_TMTPro18x_K_F1 217.2 177.16 214390 171720 200500 206260 183380 222520 200770 187070 243900 264540 273720 259710 277010 244750 216010 300090 330500 268760 198110 157520 204610 205680 192550 222970 202820 195700 247330 263100 279390 263440 279890 255800 227480 298690 314690 255830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 331840000 29181 465 27412 54818;54819 44250 44250 1 9606 Homo sapiens 0.010679298841068885 VLEENHVEHQPR Unmodified 1485.7324 0.73243935 4515 Q9H4L5-2;Q9H4L5;Q9H4L5-4;Q9H4L5-3 OSBPL3 Oxysterol-binding protein-related protein 3 yes no 0 0 0 2 0.816 1 1 1 30.856 30.907 4 3.2373E-18 6044 20230619_1881_Aki_TMTPro18x_K_F2 203.39 162.3 21539 20703 22372 13761 26491 27343 19222 19142 22950 26754 27207 22093 26431 18093 22333 30141 30616 21522 19945 18896 22658 14685 26986 26464 19935 20305 23370 26489 27639 22530 26783 19443 23279 29589 29151 20567 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60064000 29182 4515 27413 54820;54821;54822 44251 44251 1 9606 Homo sapiens 0.00900242909847293 VLEFLASSFEVSR Unmodified 1482.7718 0.77184455 3924 Q15269 PWP2 Periodic tryptophan protein 2 homolog yes yes 0 0 0 2.5 0.5 1 1 66.414 66.435 3 0.024412 21393 20230619_1881_Aki_TMTPro18x_K_F2 55.196 42.429 4303.6 2382.1 2890.7 3910.6 2924 4739.1 4002.5 3805.8 4345 3601.7 5360.7 4137.1 4331 4328.2 4638.5 3529.4 4471.4 6711.4 3960.6 2196.7 3063 3829.9 3079.2 4701.2 3983.2 3948.3 4439.8 3670.4 5399.5 4186.5 4470.5 4418.9 4696.8 3740.5 4295.4 6332.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6721300 29183 3924 27414 54823;54824 44252 44252 1 9606 Homo sapiens 0.04976950140689951 VLEFNCR Unmodified 936.44874 0.44873627 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2;F8WD69 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 7 0.816 1 1 1 47.681 47.757 2 0.0056941 12514 20230619_1887_Aki_TMTPro18x_K_F7 138.85 117.99 638600 470600 564350 588320 561910 681970 629410 563640 706450 726930 672760 668290 764670 569270 604590 820990 792950 731530 589560 432000 579640 585620 586400 679680 633020 588530 714430 724220 695700 677880 769570 604110 629170 815280 756440 695980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 760160000 29184 3488 27415 54825;54826;54827 44253;44254 44254 2 9606 Homo sapiens -0.022030146685096952 VLEGMEVVR Oxidation (M) 1046.543 0.54303059 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 1 0 3.5 0.5 1 1 43.595 43.652 2 0.0065717 11174 20230619_1882_Aki_TMTPro18x_K_F3 87.639 43.832 302910 256010 262110 287540 341750 324450 336010 321490 396200 301130 344150 367330 363710 274740 352680 426220 377670 412450 279840 234640 270960 288350 348270 325420 340860 328160 397870 307560 356610 366990 369890 294540 360630 424840 361350 391770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 367440000 29185 1716 27416 54828;54829 44255;44256 44255 1117 2 9606 Homo sapiens 0.021620793629836044 VLEGMEVVR Unmodified 1030.5481 0.54811597 1716 A0A7P0Z497;V9HWC6;P23284;A0A7P0TB45 HEL-S-39;PPIB Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase B yes no 0 0 0 4.5 1.12 1 1 1 1 52.669 52.727 2 5.3419E-05 15222 20230619_1883_Aki_TMTPro18x_K_F4 163.2 116.12 2220400 1950300 2103200 2116600 2037400 2462800 2482900 2388800 2711000 2575600 2638900 2734900 2804700 2297300 2898000 3005600 2911700 3021700 2053200 1786700 2145800 2129500 2135200 2462600 2484600 2450600 2745900 2597900 2719700 2754800 2861100 2422000 2946600 3009500 2786600 2869500 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1800699999.9999998 29186 1716 27416 54830;54831;54832;54833 44257;44258;44259;44260 44259 4 9606 Homo sapiens 0.03406383225592435 VLEGSELELAK Unmodified 1186.6445 0.64451877 349;3906 Q14980-2;A0A024R5M9;A0A024R5G4;Q14980-5;A8K394;F5H4J1;F5H6Y5;Q3SYK8;Q86XH4;F5H0Z7;F5H763;F5H3L6;F5H2F3;G1UI36;F5GZW1;F5H1L0;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 4 0.816 2 2 2 57.347 57.379 2;3 9.3522E-10 17224 20230619_1883_Aki_TMTPro18x_K_F4 230.24 169.56 317390 274930 308880 344640 330290 390880 365710 362200 379520 380900 419620 418450 429260 386320 400320 436970 417130 437290 293530 252230 315070 342880 342500 391010 367170 372540 387480 385110 429100 422110 436530 402110 408720 438250 399080 415260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 462660000 29187 349;3906 27417 54834;54835;54836;54837;54838;54839 44261;44262;44263 44262 3 9606 Homo sapiens 0.05866229266530354 VLELDNVK Unmodified 928.52295 0.52294707 1860 B4DDF7;A0A994J3N8;A8K7B7;A8K3H8;A0A994J3H1;P30153;B4DE69;B4DQY1;C9J9C1;Q8NB89;B3KQV6 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 4.5 0.5 1 1 54.385 54.427 2 0.00094009 15580 20230619_1885_Aki_TMTPro18x_K_F5 152.63 63.08 370310 284360 353300 348180 347020 379720 364270 344420 418720 430710 482260 479290 475520 386670 468600 482450 515350 520660 342160 260940 360160 346850 361480 380830 368100 356710 426060 432130 491540 481250 485090 407100 479280 485370 492670 494100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 886490000 29188 1860 27418 54840;54841 44264;44265 44265 2 9606 Homo sapiens 0.05582651694658125 VLELDSVK Unmodified 901.51205 0.51204804 2118 A8K8B0;P30154;P30154-2;P30154-4;P30154-3;B7Z1G3 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 5 0 1 55.077 55.144 3 0.0033258 15894 20230619_1885_Aki_TMTPro18x_K_F5 92.439 58.361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29189 2118 27419 54842 44266 44266 1 9606 Homo sapiens 0.057352493203779886 VLELEGEK Unmodified 915.49131 0.49131259 3691 Q53HJ0;Q59EL2;P61201;P61201-2;B2R6N0;H0YKU5 COPS2 COP9 signalosome complex subunit 2 yes no 0 0 0 2.5 0.5 1 1 52.044 52.096 2 0.016807 15353 20230619_1881_Aki_TMTPro18x_K_F2 100.02 42.914 118790 88630 94123 113330 96843 126430 114170 118170 150850 137100 145740 150950 169230 148530 120570 191400 182160 172330 109590 81375 97849 112560 101120 126600 115240 121790 151370 138030 150760 152630 169770 155490 127240 190370 173630 163910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 266550000 29190 3691 27420 54843;54844 44267 44267 1 9606 Homo sapiens 0.030186589407207975 VLELMNK Unmodified 845.46807 0.46807473 4222 Q8N1F7;A8K897;H3BVG0;Q8N1F7-2;H3BVE2 NUP93 Nuclear pore complex protein Nup93 yes no 0 0 0 1.5 0.5 1 1 58.108 58.115 2 0.0065321 17707 20230619_1880_Aki_TMTPro18x_K_F1 132.29 37.878 171580 132660 138930 164460 174670 225650 184430 186630 236730 183250 181420 174220 200520 152340 164120 216370 197700 194710 158350 121740 144590 164210 179300 222530 186930 193210 235890 185250 189480 176650 202250 161310 169670 215030 188810 185180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 335630000 29191 4222 27421 54845;54846 44268 44268 1 9606 Homo sapiens 0.03915941622403807 VLELNASDER Unmodified 1144.5724 0.57241646 3545 P35249;C9JZI1;P35249-2;C9J8M3;C9JXZ7 RFC4 Replication factor C subunit 4 yes no 0 0 0 2 0.816 1 1 1 47.028 47.08 2 1.5656E-09 13095 20230619_1881_Aki_TMTPro18x_K_F2 205.59 137.57 278910 229920 247390 279280 264510 312710 306780 275810 333620 299930 357690 307210 330970 275420 297420 343360 347420 318240 257670 210910 254430 278390 274760 312800 307640 285080 339090 302160 364310 310760 337020 288730 306030 342440 331720 302640 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 338160000 29192 3545 27422 54847;54848;54849 44269 44269 1 9606 Homo sapiens 0.005913149127991346 VLELVSITANK Unmodified 1185.6969 0.69688869 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;Q5HYG8;B4DW25;B4DP88;B4DWA7;Q5BJF5;B4DJ63;B4DLV4;H0YIZ0 SHMT2;HEL-S-51e;DKFZp686P09201 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 2.5 0.5 2 2 62.855 62.874 2;3 1.0654E-06 19616 20230619_1882_Aki_TMTPro18x_K_F3 161.51 137.18 133100 102500 95999 114250 116820 122550 117710 125820 142340 155210 162340 179040 182950 136930 172600 168270 161930 207530 122740 93973 101010 114550 119800 123420 119420 129070 144510 155950 166650 179170 185400 144430 175100 170790 155350 196530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1943699999.9999998 29193 657 27423 54850;54851;54852;54853 44270;44271 44271 2 9606 Homo sapiens 0.11146812400102135 VLENIELNKK Unmodified 1198.6921 0.69213767 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;B0QY90;B3KNG0;Q8N7H0 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 1 5.33 3.09 1 1 1 52.258 52.309 3;4 0.0002582 15311 20230619_1880_Aki_TMTPro18x_K_F1 117.23 76.246 480320 375210 435880 491790 454610 506070 496060 495300 543310 553820 583910 520470 568540 457940 511540 580630 551920 493360 443670 344530 447100 487180 471990 510370 499330 508340 552530 555510 596040 528040 577840 480940 523770 576490 527280 469730 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 524940000 29194 2176 27424 54854;54855;54856 44272;44273;44274 44272 3 9606 Homo sapiens 0.10073928257361331 VLEPYPSK Unmodified 931.50148 0.50148335 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;Q9H8E3;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRU9 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 49.096 49.177 2 0.0015162 13557 20230619_1886_Aki_TMTPro18x_K_F6 141.39 78.674 537110 465480 528530 547090 575260 638430 579220 522030 612300 692880 824320 860760 843820 682480 703610 894520 883420 869850 496770 426770 538420 547000 593940 636120 584970 546210 630620 696090 836730 860290 853740 721050 728920 893550 843420 826500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 699530000 29195 1603 27425 54857;54858 44275;44276 44275 2 9606 Homo sapiens 0.03299266665953837 VLEQPVVVQSVGTDGR Unmodified 1681.8999 0.89989861 4474 S4R369;Q9BZE1;H0Y4J2;Q6TGK8;A6NHR2 MRPL37 39S ribosomal protein L37, mitochondrial yes no 0 0 0 5 0 2 52.509 52.583 2;3 1.4278E-10 14858 20230619_1885_Aki_TMTPro18x_K_F5 182.33 142.41 92533 72252 91409 90685 99331 93347 96006 109860 91364 124630 125250 131620 123890 108010 96053 128620 113000 136420 85530 66313 93037 90141 102300 94615 96949 111430 94855 125260 126860 132460 125170 113280 99291 129260 108120 129410 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 195980000 29196 4474 27426 54859;54860 44277;44278;44279 44277 3 9606 Homo sapiens 0.08622465663893308 VLESTMVCVDNSEYMR Oxidation (M) 1947.8376 0.83763398 3655 P55036;Q5VWC4;P55036-2 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes no 0 1 0 4 0 1 55.896 55.904 3 0.028808 16607 20230619_1883_Aki_TMTPro18x_K_F4 53.169 42.535 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29197 3655 27427 54861 44280 44280 2355 1 9606 Homo sapiens -0.09837132853226649 VLETAEDIQER Unmodified 1301.6463 0.64630969 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;B4DGT1;B4DTV8;A0A1B0GTB7;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 1 0 1 49.493 49.493 2 9.4784E-23 14125 20230619_1880_Aki_TMTPro18x_K_F1 245.5 196.75 299950 243260 264210 284200 309160 337440 331820 330410 396200 384090 403500 423060 415260 352910 372530 474930 442610 452720 277070 223080 272180 284400 318310 337070 335210 339420 400300 386490 414270 425420 421490 372730 384010 473740 422880 430200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 244910000 29198 1022;3868 27428 54862 44281;44282 44282 2 9606 Homo sapiens 0.007552382844551175 VLEVNPQNK Unmodified 1039.5662 0.56620887 3853 Q53GX4;Q2TA84;Q13451;B7Z8G2;B7Z7Z8;Q6ZR21 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes no 0 0 0 6.5 0.5 1 1 46.994 47.078 2 7.1698E-06 12212 20230619_1887_Aki_TMTPro18x_K_F7 201.39 150.76 187560 145000 165250 180810 178100 178350 175520 174370 213320 220980 242530 234920 238330 192060 198820 230640 254770 231960 173200 133080 169960 179620 183880 180520 178350 179700 216400 221230 247170 236400 241460 201620 206120 231140 243070 220380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122790000 29199 3853 27429 54863;54864 44283;44284 44284 2 9606 Homo sapiens 0.048008414719333814 VLEVPPVVYSR Unmodified 1256.7129 0.71287311 3205 O00154-4;O00154-6;O00154-7;O00154;O00154-5;B4DUX0;K7EKP8;O00154-2;O00154-3;B7Z957 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 3.67 3.09 1 1 1 58.127 58.148 2 9.0056E-12 17699 20230619_1880_Aki_TMTPro18x_K_F1 196.52 148.56 345540 312100 329100 365980 249530 305410 305290 304520 331120 395570 392980 397570 390060 332670 378260 430380 419300 420000 319600 286100 334700 364430 267260 313450 305630 313770 338600 394800 400220 401300 397650 350460 387410 430190 400790 399020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 653360000 29200 3205 27430 54865;54866;54867 44285;44286 44285 2 9606 Homo sapiens 0.09478518637024536 VLEVQPEK Unmodified 940.52295 0.52294707 3932 Q15397 KIAA0020 Pumilio domain-containing protein KIAA0020 yes yes 0 0 0 4 0 1 48.12 48.16 2 0.0071477 13122 20230619_1883_Aki_TMTPro18x_K_F4 99.802 56.556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29201 3932 27431 54868 44287 44287 1 9606 Homo sapiens 0.05030651694664812 VLEYLNQEK Unmodified 1134.5921 0.59208927 3446 P13521;B4DQJ6 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 7 0 1 57.916 57.968 2 0.00027234 16974 20230619_1887_Aki_TMTPro18x_K_F7 125.48 84.451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29202 3446 27432 54869 44288 44288 1 9606 Homo sapiens 0.030176909235706262 VLFDPFELDTSVTPGR Unmodified 1791.9043 0.90431529 3924 Q15269 PWP2 Periodic tryptophan protein 2 homolog yes yes 0 0 0 6 0.816 1 1 1 64.978 65.016 2 1.5726E-10 20354 20230619_1886_Aki_TMTPro18x_K_F6 187.62 164.39 31782 27447 29113 31511 30266 29055 34231 31534 32324 35552 34099 35855 37496 33409 38371 43377 40569 46212 29378 25159 29824 31468 31411 29645 34227 32165 33135 35715 35078 36311 38216 35071 39154 43570 38834 43842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89839000 29203 3924 27433 54870;54871;54872 44289 44289 1 9606 Homo sapiens 0.040039300868102146 VLFEQAFGFHGK Unmodified 1378.7034 0.70337105 2950 F1T0J8;Q8IZ40 RCOR2 REST corepressor 2 yes no 0 0 0 3 0 1 60.257 60.286 3 5.3292E-07 18545 20230619_1882_Aki_TMTPro18x_K_F3 150.21 118.83 67886 56213 67852 63006 42890 57491 61624 61503 62464 83871 87262 82549 82067 75220 73311 81510 87866 101870 62777 51525 68532 63045 47097 58646 61141 63161 64637 83477 88098 83603 83541 78185 75555 82921 84026 96490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87172000 29204 2950 27434 54873 44290 44290 1 9606 Homo sapiens 0.02916750351482733 VLFLDHPK Unmodified 967.5491 0.54910224 994 A0A0C4DG31;Q9GZR2-2;Q9GZR2;B4E331;B4DJ95 REXO4 RNA exonuclease 4 yes no 0 0 0 1 0 1 50.297 50.297 3 0.036516 14488 20230619_1880_Aki_TMTPro18x_K_F1 59.8 43.597 39321 42171 45963 52309 47815 58386 55062 53757 61021 59577 57475 62585 62284 54837 55878 70374 65259 70374 36480 38659 46218 52063 49738 58459 55279 55401 61702 59996 59383 63135 63136 57634 57534 70425 62384 66823 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50156000 29205 994 27435 54874 44291 44291 1 9606 Homo sapiens 0.06402965656798187 VLFPGCTPPACLLDGLVR Unmodified 1984.0274 0.027424084 2130 A8K940;Q66K74-2;Q66K74 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 0 4 0 1 64.945 64.955 3 0.006344 20428 20230619_1883_Aki_TMTPro18x_K_F4 65.231 53.085 3492.4 3385.4 4810.5 3660.2 3591.8 3450.4 4420.2 4614.5 3942.9 4422.3 5343.8 3545 4983.5 3853.3 6163.5 4489 6528.4 7168.2 3243.2 3100.3 4751.1 3677 3839.4 3534.5 4399.1 4627 4099.5 4450.6 5392.3 3657.2 5151 4006.7 6257.4 4654.3 6247.2 6777.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6662700 29206 2130 27436 54875 44292 44292 1 9606 Homo sapiens 0.07477146942096624 VLFPGIEDHPVLK Unmodified 1462.8184 0.81840081 4667 Q9UIW2;B4DE20 PLXNA1 Plexin-A1 yes no 0 0 0 7.5 0.5 1 1 58.98 59.025 3 0.00042375 17454 20230619_1888_Aki_TMTPro18x_K_F8 93.011 55.46 42184 36043 42813 44017 35511 42929 46315 41239 49729 42701 45727 52012 46219 42283 48991 52201 46672 57590 39022 33060 43343 43789 37777 43449 46176 42319 50279 43371 47185 52041 47307 44449 49664 52589 44753 54603 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63534000 29207 4667 27437 54876;54877 44293 44293 1 9606 Homo sapiens 0.10550434762626537 VLFPGNSTQYNILEGLEK Unmodified 2021.047 0.046956778 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 1 0 1 64.15 64.15 3 0.00019126 20214 20230619_1880_Aki_TMTPro18x_K_F1 79.837 73.399 11125 12623 9835.2 11731 12095 12853 13343 10768 10874 18593 16529 14510 16081 17869 17787 18275 17957 18572 10302 11541 10145 11940 12407 12878 13302 11359 11478 18241 16668 15030 16534 18330 18069 18376 17183 17634 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130810000 29208 630 27438 54878 44294 44294 1 9606 Homo sapiens 0.0772751775823508 VLFRPSDTANSSNQDALSSNTSLK Unmodified 2551.2514 0.25142326 4232 Q8N4V1;Q8N4V1-2 MMGT1 Membrane magnesium transporter 1 yes no 0 0 1 1 0 1 51.885 51.885 3 4.5264E-13 15141 20230619_1880_Aki_TMTPro18x_K_F1 122.3 106.71 17205 15856 17575 17893 19949 25327 21395 19975 22440 21342 23506 24528 23634 17864 24715 24180 20993 25923 15925 14529 17866 18000 20594 24918 21519 20814 22842 21594 24086 24530 24146 18991 24907 24296 20156 24586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39272000 29209 4232 27439 54879 44295 44295 1 9606 Homo sapiens 0.037847603201498714 VLFSSNGGVVK Unmodified 1105.6132 0.61315906 1159;1980 P26599;P26599-2;A0A0U1RRM4;P26599-1;A0A7I2V621;A0A0D9SF20;A6NLN1 PTBP1 Polypyrimidine tract-binding protein 1 no no 0 0 0 3 0.816 1 1 1 53.896 53.928 2;3 8.8188E-06 15818 20230619_1883_Aki_TMTPro18x_K_F4 150.1 96.631 163550 138860 168760 169100 178880 210950 193700 181050 205500 159820 176890 159580 187440 145510 188390 183140 173020 170170 151310 127370 171180 168840 185480 209420 194790 186490 207410 162770 183240 161680 190910 152600 190670 182740 165670 161770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 381450000 29210 1159;1980 27440 54880;54881;54882 44296;44297 44297 2 9606 Homo sapiens 0.06457701023100526 VLFTCFK Unmodified 913.47316 0.47316011 3433;1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;Q59H80;P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 0 0 5 0 1 60.909 60.959 3 0.009957 18294 20230619_1885_Aki_TMTPro18x_K_F5 86.086 37.583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29211 1843;3433 27441 54883 44298 44298 1 9606 Homo sapiens 0.01296245485025338 VLFTSLADNK Unmodified 1106.5972 0.59717465 995 Q7RTM4;A0A0C4DG40;Q8NF91-8;Q8NF91-2;Q8NF91-4;Q8NF91 SYNE1 Nesprin-1 yes no 0 0 0 7.67 0.471 1 2 56.549 56.605 2 0.012354 15997 20230619_1888_Aki_TMTPro18x_K_F8 73.26 15.979 291990 247100 269860 286250 274900 312680 299960 309460 312930 303310 315320 295280 321180 271570 308270 352590 323640 321380 269880 226540 276160 286280 285910 314130 301490 316170 318190 306620 323580 299540 327000 285170 314790 351160 309490 305590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2021899999.9999998 29212 995 27442 54884;54885;54886 44299;44300 44300 2 9606 Homo sapiens 0.048139947861727705 VLFVGESDIR Unmodified 1133.6081 0.60807369 2978 F6TR53;Q9H7U7;Q53T59;B5MC96 HS1BP3 HCLS1-binding protein 3 yes no 0 0 0 4.5 0.5 1 1 56.084 56.12 2 3.4812E-05 16319 20230619_1885_Aki_TMTPro18x_K_F5 152.79 102.96 55079 43244 49603 53282 46729 53626 52002 52704 51455 53761 63693 64305 61475 51858 64346 62946 64441 69246 50875 39681 50822 52992 48926 54178 52142 53949 52937 54579 64698 64395 62937 54494 65380 63435 61689 65686 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102510000 29213 2978 27443 54887;54888 44301 44301 1 9606 Homo sapiens 0.04661397160452907 VLGDLIFNQPDRR Unmodified 1541.8314 0.83142511 4281 Q8WVC6;K7ESP4;A0A8I5KT67;A0A8J9G8Q5;Q8WVC6-2 DCAKD Dephospho-CoA kinase domain-containing protein yes no 0 0 1 2 0 1 57.321 57.337 3 6.6558E-28 17516 20230619_1881_Aki_TMTPro18x_K_F2 247.29 188.13 96504 94017 93621 112440 94940 114020 115940 112020 124320 100340 97422 104870 99795 83853 127710 107800 109050 117740 89319 86180 95502 112050 99140 115110 115910 114310 125040 102200 101460 105540 103090 88478 128230 108560 104580 111690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 209020000 29214 4281 27444 54889 44302;44303 44302 2 9606 Homo sapiens 0.08218265874734243 VLGEAMTGISQNAK Unmodified 1417.7235 0.72351415 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 1 0 1 56.03 56.03 3 1.3969E-05 16854 20230619_1880_Aki_TMTPro18x_K_F1 92.906 70.373 33486 27331 35505 40854 37709 37789 38248 39590 44204 41221 45400 40380 48314 35992 45239 47547 48022 52428 30979 25129 35959 40089 38977 38484 38731 40371 44741 41548 46620 40919 49036 37920 46223 47856 45950 49728 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77688000 29215 1292 27445 54890 44304 44304 1 9606 Homo sapiens 0.03136133229168081 VLGENYTLEDEEDSQICTVGR Unmodified 2426.0907 0.09074844 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 1.5 0.5 1 1 57.627 57.634 3 7.0963E-37 17649 20230619_1881_Aki_TMTPro18x_K_F2 223.54 215.52 33631 23125 26422 35568 27060 33784 31087 28747 37894 39342 34755 34400 41836 36288 38651 41968 39399 40797 31011 21284 27509 34840 28225 34162 31314 30017 38123 39057 36118 35209 42327 37673 39418 42011 37699 38756 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 296300000 29216 2436 27446 54891;54892 44305 44305 1 9606 Homo sapiens -0.06525330388240036 VLGGLGK Unmodified 642.40646 0.40646075 2052 B4DRG7;E9PHA2;A8K4T8;Q15003;C9J470;Q15003-2 NCAPH Condensin complex subunit 2 yes no 0 0 0 2.5 0.5 1 1 50.435 50.499 2 0.062947 14360 20230619_1882_Aki_TMTPro18x_K_F3 80.377 19.255 192760 163540 223440 208570 216490 233230 227430 227420 281780 226280 254560 235640 224030 182020 228340 249960 283270 259570 178520 150080 224220 207300 225650 233840 230420 232700 282680 229110 261010 237110 229850 193170 235260 250550 270330 246530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217980000 29217 2052 27447 54893;54894 44306 44306 1 9606 Homo sapiens 0.07095377985422147 VLGILAMIDEGETDWK Oxidation (M) 1804.8917 0.89170169 3922 Q15181;V9HWB5;Q5SQT6 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 1 0 6.5 0.5 1 1 65.884 65.918 3 4.8439E-06 20702 20230619_1886_Aki_TMTPro18x_K_F6 109.83 102.46 11950 10999 12664 13804 12972 10790 14259 12002 11204 11350 17834 13026 14806 10338 12093 14552 11375 16197 11064 10089 12812 13672 13443 11179 14212 12175 11839 11551 17818 13085 15055 10988 12322 14638 10924 15349 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48461000 29218 3922 27448 54895;54896 44307 44307 2598 1 9606 Homo sapiens 0.02145150632259174 VLGIQVDTDGSGR Unmodified 1315.6732 0.67319314 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 4.5 0.5 1 1 51.77 51.82 2 1.6113E-35 14785 20230619_1883_Aki_TMTPro18x_K_F4 267.39 227.68 255030 196960 204960 231380 214450 240050 242160 245250 271410 294890 296450 259780 324160 251200 255700 313600 321350 277120 235350 180660 212680 230990 222920 242240 243510 251480 276000 294270 303870 265190 326570 262800 265140 311940 306520 263760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1554299999.9999998 29219 2188 27449 54897;54898 44308;44309 44308 2 9606 Homo sapiens 0.027983468956335855 VLGLVLLR Unmodified 881.60622 0.60622319 2604 J3QLE5;Q66K91;Q5XPV6;B4DVS0;X5DP00;Q9UIS4;Q15182;P14678-2;P63162;P14678;P63162-2;P14678-3;Q53HE7;Q6LBS1 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated protein;Small nuclear ribonucleoprotein-associated proteins B and B';Small nuclear ribonucleoprotein-associated protein N yes no 0 0 0 7 0 1 63.233 63.266 2 0.0027252 19311 20230619_1887_Aki_TMTPro18x_K_F7 122.15 97.156 358220 351680 361890 408620 362210 391330 396930 381730 497330 237160 232830 131650 173620 157780 397210 171200 160670 115780 331680 322260 367590 407800 377190 396890 401130 386930 489520 244780 248510 139740 189660 162580 385660 169500 155700 110720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 289220000 29220 2604 27450 54899 44310 44310 1 9606 Homo sapiens 0.1606843293318434 VLGMDPLPSK Unmodified 1055.5685 0.56851706 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;Q59GP7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 4.5 3.5 1 1 58.28 58.327 2 1.0213E-06 17777 20230619_1880_Aki_TMTPro18x_K_F1 154.56 112.58 219320 196500 208280 210630 164190 229870 237230 222790 244840 277510 269710 266350 298320 249080 256480 283830 268970 292880 202840 179990 211930 211920 176360 230780 235230 229580 250140 277150 276780 270290 301510 259410 262390 285110 257400 277990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 782270000 29221 3823 27451 54900;54901 44311;44312 44311 2 9606 Homo sapiens 0.04295553885390291 VLGMDPLPSK Oxidation (M) 1071.5634 0.56343168 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;Q59GP7 ILF3 Interleukin enhancer-binding factor 3 yes no 0 1 0 7 0.816 1 1 1 52.584 52.659 3 0.0016887 14625 20230619_1888_Aki_TMTPro18x_K_F8 83.869 58.21 151780 135160 151780 152970 167300 167440 166240 174780 183350 170770 181360 164990 185800 166650 182580 199590 164190 181410 140420 123860 154400 153280 172390 168470 168260 177900 185740 172650 186290 167960 189360 173530 184810 198990 157390 172430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 397550000 29222 3823 27451 54902;54903;54904 44313;44314 44314 2507 2 9606 Homo sapiens 0.030512500227587225 VLGMTLIQK Oxidation (M) 1017.5893 0.5892525 3793 X5DNM4;V9HW62;Q04760-2;Q04760 GLO1;HEL-S-74 Lactoylglutathione lyase yes no 0 1 0 3 0 1 54.407 54.454 2 0.00043554 16092 20230619_1882_Aki_TMTPro18x_K_F3 131.06 76.513 116310 90588 106030 135140 133930 113560 118860 112730 168110 80450 92400 74514 85792 63823 88628 103080 102940 84171 107440 83302 109110 132440 136350 116500 122160 114460 165170 83036 97955 75720 87905 68282 90937 101840 98224 80215 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72916000 29223 3793 27452 54905 44315 44315 2476 1 9606 Homo sapiens 0.08116144265090952 VLGMTLIQK Unmodified 1001.5943 0.59433788 3793 X5DNM4;V9HW62;Q04760-2;Q04760 GLO1;HEL-S-74 Lactoylglutathione lyase yes no 0 0 0 4.5 0.5 1 1 60.864 60.914 3 0.0001761 18704 20230619_1883_Aki_TMTPro18x_K_F4 109.21 80.816 109680 84586 94662 149080 86038 117080 107100 109770 187060 87298 84998 100650 100890 88551 86585 148750 127010 115640 101270 77958 97634 144640 90992 120500 109140 112160 181640 90067 92780 101280 101920 94842 90871 146450 121050 110230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 514110000 29224 3793 27452 54906;54907 44316;44317 44316 2 9606 Homo sapiens 0.09360448127699783 VLGPCSDILK Unmodified 1100.59 0.58998078 2223 P10644;B2R5T5;Q68DQ4 PRKAR1A;DKFZp779L0468 cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 0 0 0 8 0 1 56.276 56.333 3 0.00012467 16308 20230619_1888_Aki_TMTPro18x_K_F8 125.48 76.684 68992 59600 73309 68188 57028 75566 92777 81585 103010 60000 63023 61805 57701 60907 70827 63005 68500 62450 63850 54631 73874 68300 61561 75961 91729 82384 102580 61934 66343 62659 59785 62912 71617 63288 65521 59343 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97573000 29225 2223 27453 54908 44318 44318 1 9606 Homo sapiens 0.04370938914098588 VLGPIHER Unmodified 919.52395 0.52395013 244 B4DXH3;A0A1W2PPC6;A0A804HJ11;B2R6Z9;B3KY32;A0A024R3H8;Q9H3H5-3;Q9H3H5-2;Q9H3H5 DPAGT1 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase yes no 0 0 0 6.5 0.5 1 1 37.077 37.144 3 0.00038404 8383 20230619_1886_Aki_TMTPro18x_K_F6 143.89 108.59 84306 58077 77838 83227 85577 87137 89172 106810 144720 86493 86089 98872 109570 81560 78798 109600 114560 109020 77829 53408 79748 82039 88439 88249 91404 107150 141790 88965 92149 99243 109610 86229 82806 109560 109230 103580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 110460000 29226 244 27454 54909;54910 44319;44320 44319 2 9606 Homo sapiens 0.06096910854239468 VLGQLHGGPSSCSATGTNR Unmodified 1897.9065 0.90645733 2782 CON__P15636 yes yes 0 0 0 5.33 1.7 1 1 1 39.366 39.425 3 3.6937E-49 9366 20230619_1882_Aki_TMTPro18x_K_F3 268.26 250.56 + 93103 63765 108620 112970 216150 137200 136130 142870 77055 97966 111190 167200 91123 77347 119960 111850 114280 185420 86121 58802 110560 110300 212850 137210 140140 144360 83426 103310 112090 163370 94989 84632 121150 115940 109890 175070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 290670000 29227 2782 27455 54911;54912;54913 44321;44322;44323 44321 3 -0.006579644469638879 VLGQLTETGVVSPEQFMK Unmodified 1962.0132 0.013213808 379 G3V4W4;A0A024R649;Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes no 0 0 0 8 0 1 63.353 63.376 3 1.1979E-13 19273 20230619_1888_Aki_TMTPro18x_K_F8 149.09 138.99 36811 31628 36757 37217 31126 40991 38189 39564 35726 42689 41065 42512 46947 35772 41389 56167 45835 50251 34048 28999 37270 37185 33004 41118 38045 40596 36788 42948 42153 42964 47438 38212 42515 55733 43843 47775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132750000 29228 379 27456 54914 44324 44324 1 9606 Homo sapiens 0.0706877299480766 VLGQLTETGVVSPEQFMK Oxidation (M) 1978.0081 0.0081284304 379 G3V4W4;A0A024R649;Q96EK6 GNPNAT1 Glucosamine 6-phosphate N-acetyltransferase yes no 0 1 0 8 0 1 62.096 62.124 3 0.0181 18669 20230619_1888_Aki_TMTPro18x_K_F8 55.688 41.971 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29229 379 27456 54915 44325 44325 232 1 9606 Homo sapiens 0.058244691321988284 VLGQPHHELDSK Unmodified 1358.6943 0.69426293 1613 B4DHE8;A0A6Q8PF05;Q96DH6-2;Q96DH6;A0A6Q8PHT3;J3QKT5;A0A6Q8PFU8;J3KTC1 MSI2 RNA-binding protein Musashi homolog 2 yes no 0 0 0 5 0.816 1 1 1 37.264 37.332 4 6.6971E-13 8388 20230619_1885_Aki_TMTPro18x_K_F5 195.77 163.76 193810 137100 182780 199420 209300 212130 224350 211180 252890 215790 248820 246480 237570 213650 223060 243420 263260 255240 178980 126080 187090 196370 215590 213500 226180 216000 255700 218830 254980 247770 242250 222990 229400 244760 251440 242330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 498300000 29230 1613 27457 54916;54917;54918 44326;44327 44327 2 9606 Homo sapiens 0.029263569951581303 VLGQVSCELVSPK Unmodified 1414.749 0.74900062 1956 B4DXG8;A5PLM5;Q06265;Q06265-2;D6RAP4;D6R905;D6RA17;D6RIY6 EXOSC9 Exosome complex component RRP45 yes no 0 0 0 4.5 3.5 1 1 58.294 58.317 3 0.024412 17059 20230619_1888_Aki_TMTPro18x_K_F8 55.196 39.305 106770 88590 109230 117220 100270 119170 114420 109230 134790 125300 126100 131620 141640 114300 130470 137610 140330 133880 98754 81334 110680 116030 105320 120100 115190 112750 135820 125990 130510 132730 143500 119730 133440 137690 134130 127220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 736800000 29231 1956 27458 54919;54920 44328;44329 44329 2 9606 Homo sapiens 0.05821607751568081 VLGTAFDPFLGGK Unmodified 1320.7078 0.70778773 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;B4DZB4 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 2.5 0.5 2 2 63.801 63.821 2;3 2.4036E-08 20331 20230619_1881_Aki_TMTPro18x_K_F2 199.08 152.61 71474 75993 65081 78643 71166 96570 96193 82306 91266 117410 105290 91321 99933 84541 96849 120730 98815 97326 66165 69549 66864 79444 74228 95958 95340 86015 93931 115960 107050 93707 102000 89337 98783 119360 94516 92694 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 414380000 29232 769 27459 54921;54922;54923;54924 44330;44331 44330 2 9606 Homo sapiens 0.06026214774396976 VLGTEDLYDYIDK Unmodified 1542.7454 0.74535503 1352 Q5U5J2;P68400;A0A2R8Y5A0;B2R6D7;E7EU96;Q2I0Y7;A0A2R8YD58;A0A2R8YFU2;B5BUH5;A0A2R8YF43;A0A2R8YDP2;P68400-2 CSNK2A1 Casein kinase II subunit alpha yes no 0 0 0 6 0 1 62.987 63.035 3 0.016286 19504 20230619_1886_Aki_TMTPro18x_K_F6 61.532 57.871 46896 41002 50689 51206 40595 53427 43357 48979 57488 64093 52351 57700 60562 58244 64667 66977 55750 68575 43411 37614 51029 50906 43123 53737 44035 50733 57632 63773 54369 58856 61782 60507 65211 67252 53516 65069 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 229680000 29233 1352 27460 54925 44332 44332 1 9606 Homo sapiens -0.004307835412873828 VLGTSPEAIDSAENR Unmodified 1557.7635 0.76346471 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 2.33 0.471 2 1 47.988 48.063 2;3 3.6737999999999998E-93 13520 20230619_1881_Aki_TMTPro18x_K_F2 344.63 310.67 131200 86455 254860 122270 127220 175970 173350 123750 164500 128210 150210 158450 146420 128320 130910 140470 174110 170210 122110 79509 245910 121440 143370 172550 172000 130300 167340 130380 154700 158440 148900 134020 135820 142600 166140 161360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 753660000 29234 2980 27461 54926;54927;54928 44333;44334 44333 2 9606 Homo sapiens 0.006893514334251449 VLGYIQLGQK Unmodified 1117.6495 0.64954457 1437 A0A384MTJ7;P30837;B4DLJ0 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes no 0 0 0 4 0 1 60.887 60.889 3 0.0019164 18683 20230619_1883_Aki_TMTPro18x_K_F4 95.358 69.239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29235 1437 27462 54929 44335 44335 1 9606 Homo sapiens 0.09542577919796713 VLHDAQQQCR Unmodified 1253.5935 0.59350303 1903 A1L0T0;M0R026 ILVBL Acetolactate synthase-like protein yes no 0 0 0 4.5 0.5 1 1 30.45 30.521 3 1.5806999999999998E-19 5860 20230619_1885_Aki_TMTPro18x_K_F5 243.65 228.11 56471 25688 77655 77733 99339 110000 81146 87511 83371 69052 99959 136930 89671 100120 116480 42675 131150 110430 52234 23983 77446 74522 100920 108150 82999 90471 85405 72849 101650 134430 93286 101390 118340 47870 125200 104250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 218840000 29236 1903 27463 54930;54931 44336;44337 44336 2 9606 Homo sapiens -0.02314998259339518 VLHEAEGHIVTCETNTGEVYR Unmodified 2413.1332 0.13322238 3720 P62318;P62318-2;H3BT13 SNRPD3 Small nuclear ribonucleoprotein Sm D3 yes no 0 0 0 3 0.816 2 2 2 44.316 44.383 3;4 2.8443E-45 11871 20230619_1881_Aki_TMTPro18x_K_F2 253.48 244.63 153030 77574 120060 133110 141920 127860 130770 152650 163160 185980 199460 180100 187350 141530 157340 203290 191660 199900 140920 71616 125050 129740 145300 130260 133610 155040 165940 185880 202220 181890 190050 150620 162680 202950 183100 189880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4809000000 29237 3720 27464 54932;54933;54934;54935;54936;54937 44338;44339;44340 44338 3 9606 Homo sapiens -0.0168189046939915 VLHFFNVK Unmodified 1002.5651 0.56508666 2096 B3KM89;A8K6V0;O94855;O94855-2;E9PDM8;Q49AI3;E9PC44;Q4W5D3 SEC24D Protein transport protein Sec24D yes no 0 0 0 6 0 1 55.889 55.963 3 0.00082715 16435 20230619_1886_Aki_TMTPro18x_K_F6 108 76.543 145680 105570 128970 129250 144620 185840 181450 183620 239060 74455 57129 56085 67091 49047 97691 74208 60376 49818 134480 96901 132710 129350 150300 183450 182400 184750 232490 80844 67687 57644 69618 52171 96607 72888 58055 47615 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48042000 29238 2096 27465 54938 44341 44341 1 9606 Homo sapiens 0.06390671893700528 VLHFPNPEDK Unmodified 1194.6033 0.60332266 2723 B9A6J2;Q15042;Q15042-3;D3DP75;A0A8J9AUI2;Q15042-4 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit yes no 0 0 0 6.5 0.5 1 1 49.851 49.931 3 0.073587 13843 20230619_1886_Aki_TMTPro18x_K_F6 40.883 24.659 124350 111200 106800 105210 107240 120920 107510 108380 159240 94642 82397 80623 94028 75702 102730 107680 96462 74669 114910 101750 109940 107040 111530 120860 109950 111220 156080 96117 88678 82377 96021 79920 103980 105840 92204 71350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42155000 29239 2723 27466 54939;54940 44342 44342 1 9606 Homo sapiens 0.013805130176933744 VLIAAHGNSLR Unmodified 1149.6618 0.66184059 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8;B4DKL5;B4DMJ7;B7Z9E5;B4DJA4;P15259;A4D2J6 PGAM1;hCG_2015269;PGAM2 Phosphoglycerate mutase;Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 yes no 0 0 0 5 1.58 1 1 1 1 39.84 39.903 3 1.1956E-50 9496 20230619_1883_Aki_TMTPro18x_K_F4 266.17 223.45 350330 318830 374840 363930 352190 359970 408170 375040 358760 402020 408250 371290 347190 293790 393880 348080 452820 354360 324360 292190 378320 363970 368590 364840 406890 382940 370420 403710 413790 375680 358540 308540 402660 349450 432000 336870 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 794850000 29240 3475 27467 54941;54942;54943;54944 44343;44344;44345;44346 44344 4 9606 Homo sapiens 0.09299614382825894 VLIALLAR Unmodified 867.59057 0.59057313 4243 Q8NBJ5;M0QX72;A0A8I5QKL8;A0A8I5QL08 COLGALT1 Procollagen galactosyltransferase 1 yes no 0 0 0 8 0 1 63.559 63.582 2 0.019228 19360 20230619_1888_Aki_TMTPro18x_K_F8 89.703 46.657 71028 69563 66350 58558 96349 131040 95192 91388 156210 17507 14499 23770 25628 21956 33503 29193 25515 26476 65722 63580 68242 61036 98001 126050 97760 94081 149580 22170 22109 23842 26251 23080 33463 29083 24497 25172 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34319000 29241 4243 27468 54945 44347 44347 1 9606 Homo sapiens 0.15148146416129293 VLIDISEK Unmodified 915.5277 0.5276981 1553 O95394-4;J3KN95;H0Y987;A0A8V8TMH7;B3KN28;A0A8V8TLT8;A0A494C1Q4;A0A8V8TNH4;A0A494C1E2;A0A8V8TMI1;O95394;O95394-3;A0A087WT27;A0A494C0G1;A0A8V8TM25;A0A494C099;H0Y8I3;A0A494C163;D6RIS6;D6RCQ8;D6RF77;A0A8V8TNG4 PGM3 Phosphoacetylglucosamine mutase yes no 0 0 0 5 0 1 57.657 57.716 2 0.00045579 16957 20230619_1885_Aki_TMTPro18x_K_F5 128.61 25.894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29242 1553 27469 54946 44348 44348 1 9606 Homo sapiens 0.06655535837421667 VLIDPVSVQDK Unmodified 1211.6762 0.67615325 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2;Q7L4K8 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 5.8 0.748 2 2 1 56.956 57.023 2;3 3.2921E-05 16860 20230619_1886_Aki_TMTPro18x_K_F6 136.49 95.459 164990 123760 159370 157710 121000 152870 157300 145010 171170 196700 212440 227900 218420 210910 196380 258330 232340 267660 152440 113620 161790 156440 129860 154730 157010 150160 175310 196950 216390 229400 221870 220500 202430 259170 222200 253990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1131600000 29243 1736 27470 54947;54948;54949;54950;54951 44349;44350;44351 44350 3 9606 Homo sapiens 0.07878222020485737 VLIEATK Unmodified 772.46945 0.46945494 4114 Q6NXE6-2;Q6NXE6;B4E1N1;F5H4P3;Q68CW5 ARMC6;DKFZp762A1314 Armadillo repeat-containing protein 6 yes no 0 0 0 7 0 1 49.589 49.673 2 0.0056882 13434 20230619_1887_Aki_TMTPro18x_K_F7 144.83 41.853 191870 155610 156290 178610 192830 202430 191520 200810 247980 225950 223700 199640 259340 187410 182100 259250 252650 227560 177130 142670 162390 178820 197470 202910 194910 205860 248500 226270 231950 203630 259730 197670 190840 257360 240880 216560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60630000 29244 4114 27471 54952 44352 44352 1 9606 Homo sapiens 0.07411898982809362 VLIFSQMTK Unmodified 1065.5893 0.5892525 1005;1857 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3;Q8TDI0;K7EMY3;B3KRD4;F2Z2R5;Q6ZSZ4;A0A8V8TR54;Q12873;Q12873-3;Q12873-2;B4DLC6;A0A5F9ZHX5;B4DKV1 CHD4;CHD5;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3 no no 0 0 0 5 0 1 61.646 61.695 2 0.00095584 18644 20230619_1885_Aki_TMTPro18x_K_F5 120.31 83.736 191170 165920 182240 179020 183310 224050 202150 204000 231380 112070 109190 82189 88230 71237 177960 88455 86157 85500 176760 152010 185890 180390 191040 222650 203590 207300 228790 117500 116880 84568 94918 74804 173820 88739 83318 81242 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78815000 29245 1005;1857 27472 54953 44353 44353 1 9606 Homo sapiens 0.05908144265072224 VLIGGDETPEGQR Unmodified 1369.6838 0.68375782 3284 O60701;O60701-3;O60701-2;Q9NQ81 UGDH;GDH UDP-glucose 6-dehydrogenase yes no 0 0 0 1.5 0.5 1 1 45.516 45.557 2 4.7101E-21 12355 20230619_1881_Aki_TMTPro18x_K_F2 232.88 206.28 96704 85672 106660 109740 133470 147330 129750 127330 140710 127090 129870 148480 143920 118980 124700 144670 155920 158860 89542 78609 107950 109320 136380 145650 131370 131450 142320 129120 134490 148720 145540 125090 128970 145700 148910 150730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 185860000 29246 3284 27473 54954;54955 44354;44355 44355 2 9606 Homo sapiens 0.013703295500818058 VLIGVGK Unmodified 684.45341 0.45341094 3931 Q15393;A8K6V3;B3KQH1;B3KM77;Q15393-3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 3 0 1 51.892 51.958 3 0.012646 15021 20230619_1882_Aki_TMTPro18x_K_F3 88.591 49.048 71582 58034 59589 71995 80582 91237 80596 78946 95868 77589 91946 89810 97366 84455 82556 101870 99489 94421 66094 53249 61930 71786 82107 90506 81707 81466 96584 78915 94731 90503 98525 88185 85249 101620 94992 89779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120460000 29247 3931 27474 54956 44356 44356 1 9606 Homo sapiens 0.0985623753656455 VLIIGGGDGGVLR Unmodified 1224.719 0.71902112 3479 P19623;K7ESL0 SRM Spermidine synthase yes no 0 0 0 3.67 3.09 1 1 1 58.505 58.525 2 9.709299999999999E-21 18013 20230619_1881_Aki_TMTPro18x_K_F2 280.96 206.12 229850 195130 205990 235030 185270 218350 197640 211800 232290 271900 274290 242320 272380 228530 241610 296480 290070 308150 212400 178960 211090 233860 194640 221930 199800 218440 236550 270610 279110 247020 276590 239870 249220 297310 277200 292490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 875300000 29248 3479 27475 54957;54958;54959 44357;44358;44359 44358 3 9606 Homo sapiens 0.11565036868569223 VLIIGSGGR Unmodified 870.5287 0.52870115 3488 Q3B7A7;Q59HH3;P22102;Q15374;P22102-2;F8WD69;C9JBJ1;C9JTV6;C9JZG2;C9JKQ7 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 4.5 0.5 1 1 48.55 48.607 2 0.00072573 13336 20230619_1883_Aki_TMTPro18x_K_F4 125.58 104.04 465810 416080 465000 463530 464890 545520 482520 479620 583010 570940 519530 495290 565950 467720 501620 594230 582560 553430 430970 381250 472440 465440 483760 543970 488690 496900 586000 569970 537870 505400 573100 490160 516180 592570 556410 526190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 379680000 29249 3488 27476 54960;54961 44360;44361 44360 2 9606 Homo sapiens 0.08825794997005687 VLIPIHEANR Unmodified 1160.6666 0.66659162 4383 Q96N67;Q96N67-6;Q96N67-2;Q96N67-5;Q96N67-3;Q96N67-4;A0A2X0SSK2;B3KRG0;A0A1B0GWE0;B4DSH0;A4FU72;A0A0U1RR97 DOCK7 Dedicator of cytokinesis protein 7 yes no 0 0 0 7.5 0.5 1 1 43.835 43.886 3 2.2193E-05 11055 20230619_1888_Aki_TMTPro18x_K_F8 132.88 104.99 36772 29247 35215 38943 39012 35978 36059 45458 50158 48522 43806 55534 55328 46350 38094 62817 57070 62581 33984 26858 35968 38498 40116 36838 36991 45842 50082 49072 45804 55730 55304 48982 40226 62767 54459 59422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65047000 29250 4383 27477 54962;54963 44362 44362 1 9606 Homo sapiens 0.09268498525602809 VLIPLHTVR Unmodified 1046.66 0.66004968 2656 B7Z7C0;Q86XZ2;Q58EX4;B7Z5X1;Q562F2;B5BTZ7;Q59EK0;Q16537-3;Q16537-2;Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes no 0 0 0 4.5 0.5 1 1 46.581 46.641 3 0.0015078 12335 20230619_1885_Aki_TMTPro18x_K_F5 93.598 77.444 186280 157040 178290 169370 178150 223230 201210 191990 255090 178780 194030 180010 204980 161800 200620 206000 215950 203840 172220 143880 181770 170810 185990 220900 203150 197930 254130 181630 202350 182210 208610 169900 204950 206170 206390 193670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84334000 29251 2656 27478 54964;54965 44363 44363 1 9606 Homo sapiens 0.1385860536488508 VLISDSLDPCCR Unmodified 1433.6643 0.66428471 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;A0A286YFA2;A0A286YFL2;A0A286YFM8;A0A286YFB2;A0A286YFC8;A0A286YER3;A0A286YF34;A0A286YFK5;A0A286YFF3 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 5 0.816 2 2 2 54.959 55.011 2;3 8.8034E-13 15808 20230619_1885_Aki_TMTPro18x_K_F5 266.54 251.11 449610 373660 405300 436900 452610 453670 551520 511530 448960 458450 499380 598860 497700 455760 604080 507210 500470 639550 415440 342620 416350 436410 468380 458970 547110 517350 465230 470150 511020 596400 513140 477520 606190 516590 480810 605540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1004799999.9999999 29252 1334 27479 54966;54967;54968;54969;54970;54971 44364;44365 44365 2 9606 Homo sapiens -0.03520086056664695 VLISDSLDPCCRK Unmodified 1561.7592 0.75924773 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;A0A286YFA2;A0A286YFL2;A0A286YFM8;A0A286YFB2;A0A286YFC8;A0A286YER3;A0A286YF34;A0A286YFK5;A0A286YFF3 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase yes no 0 0 1 7.5 0.5 1 1 50.573 50.652 3 6.2175E-11 13762 20230619_1888_Aki_TMTPro18x_K_F8 179.59 161.72 364560 428770 381730 313410 372790 295840 300890 314750 273120 371460 402850 413070 349930 311440 496440 426600 463030 430140 338150 391330 385540 326530 384940 301830 307180 321800 285460 373290 405320 414030 365820 330610 500000 427260 443120 408630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 403470000 29253 1334 27480 54972;54973 44366;44367 44367 2 9606 Homo sapiens 0.000838474145211876 VLISSLK Unmodified 758.49019 0.49019038 2481 Q8N684-3;Q8N684;Q8N684-2;B4DGF8;F5H669 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 0 0 0 3.5 0.5 1 1 55.017 55.045 2 0.0044676 16377 20230619_1882_Aki_TMTPro18x_K_F3 148.07 56.808 414280 372740 391230 402670 369230 451890 459810 426560 492570 492670 484860 471750 532350 423900 382750 576710 546750 555190 383140 341440 399170 405020 388060 452680 459340 439360 499750 493760 499650 478460 534670 447070 401970 575260 521600 527520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 215620000 29254 2481 27481 54974;54975 44368;44369 44368 2 9606 Homo sapiens 0.10128489362466553 VLISTDVWAR Unmodified 1158.6397 0.63970816 543 P38919;A0A024R8W0;I3L3H2 EIF4A3;DDX48 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 0 2 0 1 59.382 59.395 2 0.0091181 18365 20230619_1881_Aki_TMTPro18x_K_F2 100.76 71.67 91735 78485 88471 99107 88427 113160 108620 104890 122600 110920 105570 109230 120550 104720 110280 121140 114180 128630 84824 72014 90239 98560 92529 113130 108760 107890 123420 111760 109810 110810 122100 109050 112600 121860 109310 122040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31535000 29255 543 27482 54976 44370 44370 1 9606 Homo sapiens 0.0667338991440829 VLITENDVK Unmodified 1029.5706 0.57062555 2410 B3KT25;Q96S55-2;Q96S55;Q96S55-4;Q96S55-3 WRNIP1 ATPase WRNIP1 yes no 0 0 0 4 0 1 50.84 50.872 2 0.045141 14381 20230619_1883_Aki_TMTPro18x_K_F4 74.165 44.356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29256 2410 27483 54977 44371 44371 1 9606 Homo sapiens 0.05702305894828896 VLITTDLLAR Unmodified 1113.6758 0.67575932 2105;3883 P60842;A8K7F6;B4DNH2;Q14240;Q14240-2;E7EQG2;Q9NZE6;Q96B07 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed no no 0 0 0 1.5 0.5 1 1 61.252 61.257 2 4.3297999999999997E-19 19109 20230619_1881_Aki_TMTPro18x_K_F2 248.99 210.84 1078900 935530 986570 1142400 974660 1157200 1128500 1229800 1210100 1278500 1201700 1130400 1349200 1089000 1157100 1416500 1139900 1123400 997310 858050 1010800 1136900 1018300 1170500 1131900 1252300 1228600 1284700 1239300 1153500 1362700 1141900 1180500 1401100 1090700 1070200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1687399999.9999998 29257 2105;3883 27484 54978;54979 44372 44372 1 9606 Homo sapiens 0.12346847091271229 VLIVYAHQEPK Unmodified 1295.7238 0.72377215 64 Q5TD07;B3KPX6;A0A024QZT9;P16083;A2A2U4;Q5TD05;Q59EN2 NQO2 Ribosyldihydronicotinamide dehydrogenase [quinone] yes no 0 0 0 1 0 1 48.186 48.186 3 0.00020469 13650 20230619_1880_Aki_TMTPro18x_K_F1 110.84 87.959 30452 28268 29662 29721 35325 36450 43158 37612 45342 38003 42943 46080 48400 40561 40853 46161 48927 45623 28176 25885 30290 30004 36426 36392 43101 38365 45947 38645 44432 46228 48869 42313 42147 46257 46712 43351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32807000 29258 64 27485 54980 44373 44373 1 9606 Homo sapiens 0.08773921011288621 VLLAAAVCTK Unmodified 1044.6002 0.60015154 2181 B0YIW5;P48444;Q6P1Q5;E9PK34 ARCN1 Coatomer subunit delta yes no 0 0 0 4 0 1 57.026 57.032 2 0.00026232 17071 20230619_1883_Aki_TMTPro18x_K_F4 152.47 105.4 113730 97941 108990 113160 104670 128020 130590 115890 142840 102570 96975 77101 98130 77430 106390 112100 109750 97678 105170 89784 111100 113240 109870 128030 130480 118920 142870 103700 101610 79570 100500 81731 108260 111260 104900 92972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53187000 29259 2181 27486 54981 44374 44374 1 9606 Homo sapiens 0.07963546639325614 VLLALHDR Unmodified 935.55525 0.55525025 2095 A8K6T5;Q9UBL3-3;Q9UBL3;F5H8F7;B4DPT1;Q9UBL3-2 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes no 0 0 0 4.5 3.5 1 1 45.4 45.414 3 5.6853E-05 12461 20230619_1880_Aki_TMTPro18x_K_F1 153.78 114.47 102030 88543 96401 100310 127610 139530 149160 116590 178150 94585 146840 105320 124330 244140 107710 126450 149150 135550 94341 81152 98927 100850 130680 137600 149870 120180 178180 97518 150840 111380 127810 240420 112200 129530 142210 128700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 178480000 29260 2095 27487 54982;54983 44375;44376 44375 2 9606 Homo sapiens 0.08489483888320137 VLLATLSIPITPER Unmodified 1521.913 0.91302948 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 5 0 1 64.136 64.18 3 0.026445 19819 20230619_1885_Aki_TMTPro18x_K_F5 52.24 20.398 31622 24919 27790 30185 27069 30799 26951 34251 33579 35139 38954 38090 41860 36019 38012 42553 41662 48967 29204 22861 28548 30066 28199 31176 27420 34756 34059 35546 39834 38483 42450 37578 38950 42999 39878 46415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35398000 29261 3152 27488 54984 44377 44377 1 9606 Homo sapiens 0.17294948513972486 VLLDAPCSGTGVISK Unmodified 1515.7967 0.79667909 3589 P46087;P46087-4;P46087-2;P46087-3 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase yes no 0 0 0 4.5 3.5 1 1 57.228 57.254 3 1.2743E-05 16701 20230619_1888_Aki_TMTPro18x_K_F8 111.07 92.327 106840 84487 102490 110120 106280 123240 110900 115330 113030 120920 111840 99209 133130 106970 118890 132770 128920 128510 98734 77569 104580 109260 110250 123420 111660 118490 115080 121250 115670 102050 134480 111510 121770 132730 123250 122110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 256440000 29262 3589 27489 54985;54986 44378;44379 44379 2 9606 Homo sapiens 0.05941261951738852 VLLDIFTGVR Unmodified 1131.6652 0.66519463 3615 P49916-3;P49916;B7Z6I3 LIG3 DNA ligase 3;DNA ligase yes no 0 0 0 4 0 1 65 65.01 2 0.0017989 20419 20230619_1883_Aki_TMTPro18x_K_F4 101.65 84.719 20779 17830 20954 19787 20199 23574 26099 22499 26017 26662 25950 28544 30475 21795 27250 26291 25626 33068 19221 16339 21259 19883 21200 23529 25963 23178 26517 26775 26848 28646 30773 22973 27673 26728 24586 31309 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12499000 29263 3615 27490 54987 44380 44380 1 9606 Homo sapiens 0.10462864436840391 VLLDNVENK Unmodified 1042.5659 0.56587452 1601 Q6U8A4;A0A669KBL1;Q93009-3;Q93009;B7Z855;B7ZAX6;B7Z7T5;H3BND8;F5H2X1;B7Z842 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 4.5 0.5 1 1 52.754 52.802 3 0.0080037 15297 20230619_1883_Aki_TMTPro18x_K_F4 70.816 36.895 138420 116310 146690 140100 165570 168210 167630 177700 193850 146640 142600 130920 155850 118500 163200 140740 152820 141200 128070 106680 148560 139960 170420 168210 169720 179970 193870 149440 149270 133270 158900 123910 165120 141190 146240 134150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 215940000 29264 1601 27491 54988;54989 44381;44382 44381 2 9606 Homo sapiens 0.04629421752088092 VLLESEQFLTELTR Unmodified 1676.8985 0.89850163 3560 P37108;H0YLA2 SRP14 Signal recognition particle 14 kDa protein yes no 0 0 0 6 0.816 2 2 2 66.223 66.26 2;3 1.3513E-29 20845 20230619_1886_Aki_TMTPro18x_K_F6 264.29 231.23 105790 75334 76978 95098 96709 108370 96055 98897 104250 89860 93191 94904 106680 95102 99800 112670 115820 127350 97522 69172 80998 94557 98966 108350 97137 101450 105300 91495 96756 96178 108180 99033 102560 113710 110740 120760 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 476200000 29265 3560 27492 54990;54991;54992;54993;54994;54995 44383;44384;44385 44384 3 9606 Homo sapiens 0.08712831575167002 VLLGETGK Unmodified 815.47527 0.4752686 3713 P62280;M0QZC5;M0R1H6 RPS11 40S ribosomal protein S11 yes no 0 0 0 7 0.816 2 2 2 49.636 49.714 2;3 0.0029639 13413 20230619_1887_Aki_TMTPro18x_K_F7 98.629 45.993 418970 347250 401580 391340 484890 490240 480890 452240 549190 448930 475230 420490 501630 362230 472350 475730 441090 366380 387310 318300 410540 393040 496690 487560 487100 464520 552470 453240 491890 426500 509250 381720 479100 470200 421810 349420 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1774099999.9999998 29266 3713 27493 54996;54997;54998;54999;55000;55001 44386;44387;44388 44387 3 9606 Homo sapiens 0.060149974944692985 VLLGLSEPIFQLPR Unmodified 1580.929 0.92901389 3973 Q6AI38;Q4AEJ3;Q4AEJ4;Q8IWA4 DKFZp762F247;hfzo1;hfzo2;MFN1 Mitofusin-1 yes no 0 0 0 4.5 0.5 1 1 65.207 65.234 3 0.00024741 20517 20230619_1883_Aki_TMTPro18x_K_F4 93.766 79.763 16415 11858 15269 15239 13974 16671 16834 17616 19111 17389 18243 19112 18465 15617 17607 19751 20700 21497 15158 10890 15589 15134 14708 16765 16883 17922 19301 17637 18775 19207 18801 16446 18102 19872 19782 20397 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 32195000 29267 3973 27494 55002;55003 44389;44390 44389 2 9606 Homo sapiens 0.161786547508882 VLLGSVSGLAGGFVGTPADLVNVR Unmodified 2297.2743 0.27433095 2530;1065 B4DLN1;B4E1E9;I3L1E8;A0A0S2Z382;A0A0S2Z3G3;Q9UBX3;Q9UBX3-2;A0A0S2Z3I3;F6RGN5 SLC25A10 Mitochondrial dicarboxylate carrier no no 0 0 0 5 0 1 65.099 65.143 3 1.527E-26 20229 20230619_1885_Aki_TMTPro18x_K_F5 185.61 168.67 4176.5 4187.9 4945.6 4833.2 4619.4 5943.4 6901.7 7187.4 6111.1 6360 4697.2 6328.6 6671.8 5574.2 7084.8 5936.6 9427.4 7420.8 3873.3 3837.2 4957.6 4846 4885.4 5951.6 6801.2 7230.7 6220.3 6467.3 4988.2 6393 6770.1 5797.6 7318.1 6046.7 8983.5 7040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212480000 29268 2530;1065 27495 55004 44391 44391 1 9606 Homo sapiens 0.17758475966229526 VLLGVGDPK Unmodified 896.53312 0.53311783 2138 A8K9K6;O00567;A0PJ92;A0A494C128;Q5JXT2 NOP56 Nucleolar protein 56 yes no 0 0 0 8 0 1 54.226 54.298 3 0.067265 15430 20230619_1888_Aki_TMTPro18x_K_F8 43.185 23.188 83994 78801 88949 95560 81775 95592 97111 106930 105330 108920 114550 120430 125650 100270 102980 124250 118630 135780 77776 72250 89888 95153 85941 96911 97337 108490 107240 110270 117610 121060 126770 105410 106100 125050 113480 128780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 132040000 29269 2138 27496 55005 44392 44392 1 9606 Homo sapiens 0.08071259419898524 VLLHLEEK Unmodified 979.57023 0.57023162 2476 B4DFV7;Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog yes no 0 0 0 6 0 1 49.986 50.063 3 0.00077951 13947 20230619_1886_Aki_TMTPro18x_K_F6 114.99 63.133 130280 111390 106330 111620 100520 125250 129740 115870 146100 133430 137440 110110 162780 116110 95509 155450 146900 118800 120320 101990 109970 112950 105840 125430 129590 119510 147540 133260 142250 113210 162020 121720 101460 153360 139860 113330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51665000 29270 2476 27497 55006 44393 44393 1 9606 Homo sapiens 0.07962930965652504 VLLLSSPGLEELYR Unmodified 1587.8872 0.88720866 2414 B3KTJ9;Q8N163-2;Q8N163;E5RHJ4 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 1 0 1 63.853 63.853 3 4.2949E-05 20071 20230619_1880_Aki_TMTPro18x_K_F1 102.9 87.516 9541.3 7862.9 8686.2 10388 8683.4 10116 11992 11300 10205 12599 14195 15957 14825 12323 12811 16429 14630 18022 8816.4 7219 8908.3 10278 9106.8 10275 11845 11501 10663 12755 14417 15923 15013 13049 13184 16520 14003 17088 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52770000 29271 2414 27498 55007 44394 44394 1 9606 Homo sapiens 0.11678054271715155 VLLPAIK Unmodified 752.51601 0.5160112 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7;B4E263;A2VDI1;B3KWS1;Q8N7L7;B7ZAU8;Q96ES5 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 4 0 1 57.96 57.963 3 0.027506 17474 20230619_1883_Aki_TMTPro18x_K_F4 76.592 57.115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29272 2332 27499 55008 44395 44395 1 9606 Homo sapiens 0.12985383604757317 VLLPEYGGTK Unmodified 1075.5914 0.59136099 1453 A0A384N6A4;P61604;Q9UNM1;B8ZZL8;A0A024R3X7;B8ZZ54 HSPE1;EPFP1 10 kDa heat shock protein, mitochondrial yes no 0 0 0 5.29 2.71 1 1 1 2 2 54.642 54.708 2;3 5.6858E-11 16234 20230619_1880_Aki_TMTPro18x_K_F1 171.56 110.78 811320 684210 720330 870060 848090 917130 921040 882780 888850 1029900 995590 989280 1138400 938020 937420 1193300 1051000 1062000 749650 627870 742180 863780 872550 923100 923420 908290 912610 1031500 1022600 1004700 1147600 982780 964460 1187000 1004600 1010100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6556199999.999999 29273 1453 27500 55009;55010;55011;55012;55013;55014;55015 44396;44397;44398;44399;44400;44401 44396 6 9606 Homo sapiens 0.05658896274530889 VLLPLHK Unmodified 818.53781 0.53780928 743;1806 B4DSD7;E9PFR3;A0A024RD11;Q14738;A8K6Y2;Q14738-2;Q59EF0;H0Y8C4;Q14738-3;H0YJU0;Q86U13;Q96B13;Q96L51;Q96L52;Q7L7W2;A0A8Q3WKR3;Q13362-2;Q13362-3;Q13362;Q13362-4;Q13362-5 PPP2R5D;PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform;Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform no no 0 0 0 4 0 1 50.136 50.171 3 0.010485 14059 20230619_1883_Aki_TMTPro18x_K_F4 92.692 23.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29274 743;1806 27501 55016 44402 44402 1 9606 Homo sapiens 0.12128188353312908 VLLQASQDENFGNTTPR Unmodified 1888.9279 0.92790427 3671 P57740;G3V1T4 NUP107 Nuclear pore complex protein Nup107 yes no 0 0 0 5 0 1 53.335 53.407 3 7.3211E-19 15232 20230619_1885_Aki_TMTPro18x_K_F5 188.44 176.79 23807 15292 22119 26439 23153 25398 26106 26316 30143 33633 39284 30484 44758 33708 27086 41326 38550 42745 21971 14101 22652 25751 24052 25769 26284 27017 30854 33504 40028 31250 44638 35098 28566 41439 36803 40569 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25912000 29275 3671 27502 55017 44403 44403 1 9606 Homo sapiens 0.01899743853346081 VLLQHVHEGYEK Unmodified 1450.7569 0.75686319 4741 Q9Y4X5;Q59FM8;A0A087WT96 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes no 0 0 0 6.5 0.5 1 1 42.508 42.593 4 1.8694E-06 10353 20230619_1887_Aki_TMTPro18x_K_F7 145 120.74 126880 105310 112970 117680 147550 148990 146170 140610 215920 104150 98313 91449 118730 90197 122990 118330 113770 96996 117220 96527 116460 118270 150540 148140 149470 143240 211020 107080 107270 93474 120710 94601 124440 117290 108830 92415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187920000 29276 4741 27503 55018;55019 44404 44404 1 9606 Homo sapiens 0.049515030633756396 VLLSALER Unmodified 899.54402 0.54401687 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A494C1T2;A0A8V8TL46;A0A8V8TMA9 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 1.5 0.5 1 1 57.269 57.277 2 0.029904 17356 20230619_1880_Aki_TMTPro18x_K_F1 89.296 53.94 247020 209630 176530 240870 181570 299970 193560 212040 215480 125250 125930 101890 126520 118270 207470 166330 160670 112590 227930 192170 185750 241320 189540 296570 195160 220380 214440 130780 133480 105350 133050 123890 206710 163520 153850 107680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 586790000 29277 2973 27504 55020;55021 44405 44405 1 9606 Homo sapiens 0.09022661794188025 VLLSDSNLHDA Unmodified 1182.5881 0.58806652 4103 Q6FI81-3;Q6FI81;H3BV90;Q6FI81-2 CIAPIN1 Anamorsin yes no 0 0 0 2.5 0.5 1 1 49.793 49.86 2 0.00035692 14074 20230619_1882_Aki_TMTPro18x_K_F3 119.75 109.33 147090 118140 140670 161940 148980 166530 164030 156300 181440 157220 146990 146410 159090 124360 146710 163690 155940 167430 135950 108520 143700 159940 154530 167780 165030 160460 182470 158560 152980 148400 161340 131160 150010 164010 149190 158950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253890000 29278 4103 27505 55022;55023 44406;44407 44407 2 9606 Homo sapiens 0.004076014298789232 VLLTTQGVDMISK Unmodified 1403.7694 0.76940171 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 1.5 0.5 1 1 61.367 61.372 3 1.541E-09 19191 20230619_1881_Aki_TMTPro18x_K_F2 169.62 149.19 434460 379890 404940 466610 378480 442060 465060 508370 494280 535110 529520 608970 617480 524390 577600 607960 577540 663880 401680 348440 413830 463830 397760 450350 465000 515440 503610 541370 546130 611770 625460 548180 588230 612660 553190 629650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 843650000 29279 3881 27506 55024;55025 44408;44409 44409 2 9606 Homo sapiens 0.08366778411391351 VLLVGADNFTLLGK Unmodified 1458.8446 0.84461556 4162 Q7Z2W9;A0A024R5G7;F5H7V8;B4DXI4;Q7Z2W9-2;H3BUY0 MRPL21 39S ribosomal protein L21, mitochondrial yes no 0 0 0 3.5 0.5 1 1 64.431 64.451 3 4.359E-05 20322 20230619_1882_Aki_TMTPro18x_K_F3 102.62 88.626 13895 11165 13929 15371 16662 19665 12691 16104 21055 14069 14818 21952 19499 17663 17719 20081 19117 20502 12847 10257 14195 15226 17013 19469 13293 16638 20717 14583 15749 21766 19680 18476 18140 20160 18287 19463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38929000 29280 4162 27507 55026;55027 44410 44410 1 9606 Homo sapiens 0.1335470393412379 VLLVGLK Unmodified 740.51601 0.5160112 107 A0A024R0R4;Q9UBE0;M0QZS6;B3KNJ4;Q9UBE0-2;Q9UBE0-3;A0A590UK93;A0A590UKC5;M0QX65;A0A590UKA0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes no 0 0 0 5 0 1 60.32 60.372 2 0.0050567 18050 20230619_1885_Aki_TMTPro18x_K_F5 114.67 72.203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29281 107 27508 55028 44411 44411 1 9606 Homo sapiens 0.1353738360475063 VLLVPGPEK Unmodified 950.58007 0.58006802 178 A0A024R1Z6;Q99536;Q99536-3;B3KUF8;Q99536-2;K7EJM4 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes no 0 0 0 4.5 3.5 1 1 55.186 55.219 2;3 0.0029619 15778 20230619_1888_Aki_TMTPro18x_K_F8 101.54 88.915 188720 185320 187720 245040 289850 311170 315950 293800 323250 207790 214450 192170 197810 170200 267050 234040 232810 222920 174710 170040 192740 243290 293530 309180 316980 299060 324200 214330 224470 195290 205760 179660 268270 233640 223020 211880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 437060000 29282 178 27509 55029;55030 44412;44413 44413 2 9606 Homo sapiens 0.10280118971047614 VLMTQQPR Oxidation (M) 987.51715 0.51715019 1851 A0A8V8TQT0;A0A8V8TQE5;Q9NPE3;A0A8V8TPK8;A0A8V8TQE9 NOP10 H/ACA ribonucleoprotein complex subunit 3 yes no 0 1 0 5.33 3.09 1 1 1 35.901 35.931 2 0.025925 7848 20230619_1888_Aki_TMTPro18x_K_F8 76.478 54.95 44728 27736 34873 42422 54092 53792 48811 45685 66554 19234 27021 17639 16415 16121 28484 21994 26403 14189 41221 25539 36574 41748 54533 53334 50012 46538 65048 20910 29073 17999 17700 16968 28597 21596 25198 13605 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38812000 29283 1851 27510 55031;55032;55033 44414;44415 44415 1181 2 9606 Homo sapiens 0.022892299113550507 VLNEECDQNWYK Unmodified 1596.6879 0.68785692 1416 A0A384ME16;Q6ICN0;B0LPF3;P62993;B3KR50;P62993-2;J3KT38;J3QRL5 GRB2 Growth factor receptor-bound protein 2 yes no 0 0 0 4 0.816 1 1 1 54.647 54.69 3 0.00012141 16036 20230619_1883_Aki_TMTPro18x_K_F4 108.3 95.319 145480 108760 131520 125330 132090 146020 139080 149990 149580 175280 172940 181920 197940 155330 188330 186800 192030 202040 134350 99757 134730 125550 137380 146200 140240 153560 152890 175910 177520 183440 200660 162860 191860 188070 183770 191700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 309850000 29284 1416 27511 55034;55035;55036 44416;44417 44416 2 9606 Homo sapiens -0.08661949018528503 VLNLGQALER Unmodified 1111.635 0.63495714 4259 Q8NI27;A0A0C4DG98;H0Y815;Q6P441 THOC2 THO complex subunit 2 yes no 0 0 0 1 0 1 56.035 56.035 2 0.0016369 16875 20230619_1880_Aki_TMTPro18x_K_F1 106.16 85.26 88219 76461 84879 91514 76689 93654 94306 88757 104230 105890 100510 94870 103800 90570 98390 118530 106270 106670 81578 70115 86432 91218 80857 94422 94377 91493 105510 105770 103410 96708 105600 95031 100690 117940 101610 101440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111390000 29285 4259 27512 55037 44418 44418 1 9606 Homo sapiens 0.0836050577165679 VLNLPPNTIMEYK Oxidation (M) 1546.8065 0.8065155 2716 C9JEL3;B9A044;B8ZZ50;Q59FE1;Q53RG0;O60573-2;O60573;A0A8I5KT16;B4E1E4;B9A023;A0A8I5KSA5;B8ZZL3 EIF4E2;tmp_locus_9 Eukaryotic translation initiation factor 4E type 2 yes no 0 1 0 1 0 1 59.164 59.164 3 0.065047 18153 20230619_1880_Aki_TMTPro18x_K_F1 44.616 28.392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29286 2716 27513 55038 44419 44419 1629 1 9606 Homo sapiens 0.05498449957144658 VLNLWQK Unmodified 899.52289 0.52288749 960;3342 Q0P607;O95104-2;O95104-3;O95104;Q05BU5;B7Z876;B7Z3A4;A0A0A0MT33;Q9UPN6;Q9UPN6-2 SFRS15;SCAF4;RBM16;SCAF8 Splicing factor, arginine/serine-rich 15;Protein SCAF8 no no 0 0 0 5 0 1 60.275 60.326 3 0.021566 18043 20230619_1885_Aki_TMTPro18x_K_F5 70.268 29.239 62079 51910 57991 59078 55116 80636 70094 51242 80519 40272 40067 27747 32257 30169 56664 36417 38163 30340 57379 47585 59246 59343 58053 79186 70053 54145 79676 41035 42642 28875 34352 31363 56055 36226 36639 28910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25801000 29287 3342;960 27514 55039 44420 44420 1 9606 Homo sapiens 0.06910696485317658 VLNNFISNQK Unmodified 1175.6299 0.62987176 3588 P46013;P46013-2;Q70L73 MKI67 Antigen KI-67 yes no 0 0 0 3 0 1 55.803 55.844 3 0.0024828 16709 20230619_1882_Aki_TMTPro18x_K_F3 81.525 56.687 36589 28797 33496 34840 26479 39711 36243 33348 39597 42464 42097 36140 43170 36942 33727 49732 43803 45386 33801 26419 34201 34751 28412 39617 36087 34758 40261 42244 43070 37041 43587 38758 35109 49476 41824 43148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9669900 29288 3588 27515 55040 44421 44421 1 9606 Homo sapiens 0.049082019090292306 VLNNMEIGTSLFDEEGAK Oxidation (M) 1981.9303 0.93027204 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DHB3;B4DWQ3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 1 0 3.5 0.5 1 1 61.318 61.334 3 4.4685E-10 18896 20230619_1883_Aki_TMTPro18x_K_F4 139.88 124.46 347850 307270 327350 382620 353630 346820 386420 351810 440130 383820 426250 430080 446300 365640 438830 521920 469030 562210 321650 281860 334920 379710 365850 353700 389310 360180 444610 387690 438960 432620 454460 387680 448530 523900 449120 533220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 781170000 29289 3374 27516 55041;55042 44422;44423 44423 1981 2 9606 Homo sapiens -0.021415885238411647 VLNNMEIGTSLFDEEGAK Unmodified 1965.9354 0.93535742 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DHB3;B4DWQ3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 4.5 1.12 1 1 1 1 63.121 63.154 3 1.4108E-38 19644 20230619_1883_Aki_TMTPro18x_K_F4 202.35 184.43 318820 274820 367780 355680 295100 372040 332890 341020 383930 418480 419010 455160 459140 391530 461750 502830 494920 534100 295270 252220 368390 352800 313570 374140 335310 352640 389880 419840 430350 458220 467490 411900 471570 505110 473490 506820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1351700000 29290 3374 27516 55043;55044;55045;55046 44424;44425;44426 44424 3 9606 Homo sapiens -0.008972846612095964 VLNQQLTNHIR Unmodified 1334.7419 0.74188183 1021;2880 A0A0U1RQP1;A0A0D9SFE4;A0A994J7J4;Q05193-3;Q05193;B4DHH5;A0A0D9SFB1;B7ZAC0;B4DK06;Q05193-5;Q05193-2;Q59GI5;A0A994J5P0;A0A1B0GU67;E5RHK8;H0YBC6;Q9UQ16-2;Q9UQ16-3;Q9UQ16;Q9UQ16-4;A0A8I5KXV5;B3KPF2;Q9UQ16-5;E5RIK2 DNM1;DNM3 Dynamin-1;Dynamin-3 no no 0 0 0 3 0 1 41.859 41.921 3 2.8719E-05 10425 20230619_1882_Aki_TMTPro18x_K_F3 137.78 84.21 112540 75499 125570 113740 158520 151060 137450 148700 184460 69429 84267 73539 66512 53671 94379 64965 76872 59030 104040 69480 126860 112210 161330 149850 141230 149900 180880 74735 90371 73897 69785 56614 94345 64877 73596 56195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134420000 29291 1021;2880 27517 55047 44427 44427 1 9606 Homo sapiens 0.08790055986014522 VLNSYWVGEDSTYK Unmodified 1659.7781 0.77805214 210 A0A024R2Q4;P61313;A0A2R8YEM3;E7EQV9;E7ENU7;E7EX53;A0A2R8Y738 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 0 0 0 7.25 0.829 1 1 2 60.484 60.528 2;3 8.128E-09 17977 20230619_1887_Aki_TMTPro18x_K_F7 157.38 143.34 478780 454200 561780 521800 582600 522860 636620 633820 476820 577570 555820 465740 646480 507040 541160 634660 662210 612810 443790 416210 563750 521840 603210 531600 634110 638230 498660 582930 570030 479900 651700 528750 559300 634220 632090 582460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2172300000 29292 210 27518 55048;55049;55050;55051 44428;44429;44430 44429 3 9606 Homo sapiens -0.02544576418449651 VLNTNIDGR Unmodified 1000.5302 0.53015772 3710 P62269;A0A0G2JQH2;Q5GGW2 RPS18 40S ribosomal protein S18 yes no 0 0 0 5.5 1.12 1 1 1 1 43.374 43.449 2 5.6056E-06 10668 20230619_1887_Aki_TMTPro18x_K_F7 182.76 105.48 1016000 735510 790070 883370 986800 1093500 1001500 965070 1327500 988420 1041600 1002300 1149400 862690 958230 1217200 1185500 989350 937020 674960 824920 882630 1011000 1086900 1018500 995410 1321600 998960 1086300 1012800 1160200 913380 991660 1204000 1130700 942820 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3938999999.9999995 29293 3710 27519 55052;55053;55054;55055 44431;44432;44433 44433 3 9606 Homo sapiens 0.02991384295091848 VLNTNIDGRR Unmodified 1156.6313 0.63126874 3710 P62269;A0A0G2JQH2;Q5GGW2 RPS18 40S ribosomal protein S18 yes no 0 0 1 1 0 1 37.273 37.273 3 0.00041789 8915 20230619_1880_Aki_TMTPro18x_K_F1 94.692 64.142 50096 73012 58617 43811 80778 52155 59413 64757 55848 47477 65033 50504 52161 48335 66730 48177 50727 48758 46614 66531 59026 46921 81241 52603 61081 64788 57439 48989 65665 51133 54335 49904 66614 48519 48676 46312 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37186000 29294 3710 27520 55056 44434 44434 1 9606 Homo sapiens 0.05921835997787639 VLPAVGISYVVYENMK Unmodified 1780.9433 0.94334333 2648 B7ZB41;B4E290;Q6NUK1-2;Q6NUK1 SLC25A24 Calcium-binding mitochondrial carrier protein SCaMC-1 yes no 0 0 0 3 0 1 64.801 64.833 3 0.00033413 20489 20230619_1882_Aki_TMTPro18x_K_F3 84.753 68.529 16736 14007 17138 17863 15144 17726 18827 19906 17743 16455 15082 13815 16453 14419 15011 16554 13912 16857 15481 12854 17352 17724 15986 17980 18743 20090 18033 16732 15655 14174 16682 14970 15239 16614 13342 15997 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8617600 29295 2648 27521 55057 44435 44435 1 9606 Homo sapiens 0.08410939116856753 VLPDPEVISDLVFLK Unmodified 1682.9495 0.94947456 4308 Q92859-3;Q92859-2;Q92859-4;Q92859;A0A024R610 NEO1 Neogenin yes no 0 0 0 8 0 1 66.937 66.956 3 0.026755 20710 20230619_1888_Aki_TMTPro18x_K_F8 49.929 34.39 6311.7 6275.2 5941 5690.1 7509.7 6823.9 7121.9 7781.9 7509.2 7440.3 8236.6 6416.2 10668 6681.8 8319.7 7476.3 7359.3 8496.6 5841.3 5738.2 6086.3 5817.3 7654.4 6844.7 7217.9 7869.4 7660.9 7505.6 8509.4 6577.2 10679 6940.7 8443.6 7560.1 7058.5 8055.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2526400 29296 4308 27522 55058 44436 44436 1 9606 Homo sapiens 0.13531780620019163 VLPGHSAGPR Unmodified 989.54066 0.54066282 499 Q5T9B9;A8K2X4;A0A024R878;P17813-2;P17813;Q96CG0;F5GX88;B7Z6Y5 ENG Endoglin yes no 0 0 0 4.5 3.5 1 1 31.44 31.446 3 1.0928E-14 6550 20230619_1880_Aki_TMTPro18x_K_F1 238.51 213.62 41181 33817 40856 37796 89496 135200 160380 162350 284110 55432 92924 128770 62931 80603 153810 61460 117780 111060 38077 30997 42412 39169 91502 129750 161000 160950 273810 64386 103400 125690 69768 83601 152300 65152 113000 104990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166990000 29297 499 27523 55059;55060 44437;44438 44437 2 9606 Homo sapiens 0.04547411740179541 VLPGHSVPLFK Unmodified 1192.6968 0.69682911 1367 A7E2X7;A0AV47;A0A2R8YD63;Q92547 TOPBP1 DNA topoisomerase 2-binding protein 1 yes no 0 0 0 4 0 1 52.542 52.566 3 0.0022528 15159 20230619_1883_Aki_TMTPro18x_K_F4 78.655 54.32 61237 54302 59406 61578 51428 61548 65178 59369 64156 73335 69573 59294 69990 56507 63429 79464 78070 69441 56640 49766 60400 61609 54443 62199 64900 61193 65680 72927 71079 60789 71101 59610 65508 78875 74495 66093 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25101000 29298 1367 27524 55061 44439 44439 1 9606 Homo sapiens 0.10818857190770359 VLPGMHHPIQMK Oxidation (M) 1402.7213 0.72134608 3017 Q92879-3;Q92879-2;Q92879-5;G5EA30;Q92879;Q92879-4;Q92879-6;E9PSH0 CELF1 CUGBP Elav-like family member 1 yes no 0 1 0 3 0 1 39.591 39.645 4 3.4152E-05 9449 20230619_1882_Aki_TMTPro18x_K_F3 125.75 99.149 57869 40121 56226 57606 53744 59323 59842 62614 85889 55581 58691 64572 71112 58539 55957 76287 75446 70905 53446 36895 57222 56757 56234 59913 60783 63553 84850 56884 62061 64971 71487 61515 58352 76014 71967 67420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 45252000 29299 3017 27525 55062 44440;44441 44440 1780 2 9606 Homo sapiens 0.03609426010325478 VLPGMHHPIQMK Unmodified 1386.7264 0.72643146 3017 Q92879-3;Q92879-2;Q92879-5;G5EA30;Q92879;Q92879-4;Q92879-6;E9PSH0 CELF1 CUGBP Elav-like family member 1 yes no 0 0 0 4 0 1 43.422 43.466 4 3.302E-05 11050 20230619_1883_Aki_TMTPro18x_K_F4 121.83 73.826 59201 37736 45683 50085 53231 54981 52150 58945 74658 52041 54229 50910 68896 47921 54143 57200 66360 53702 54562 34685 47661 49630 54714 55315 53339 59735 73918 52973 57203 51665 69096 50070 55997 57132 63287 51090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57314000 29300 3017 27525 55063 44442 44442 1 9606 Homo sapiens 0.048537298729570466 VLPGVDALSNI Unmodified 1096.6128 0.61282471 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DHB3;B4DWQ3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 6.5 1.12 1 1 1 1 64.913 64.946 2 5.8551E-05 20169 20230619_1885_Aki_TMTPro18x_K_F5 141.52 119.37 404260 373920 425390 477630 381900 405310 407610 428570 484430 502380 544800 525630 535860 421810 551700 568290 563240 628620 374270 343030 429950 472860 400720 415960 412170 438330 491660 504340 555680 529200 547680 446550 561490 572000 539240 596190 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3008099999.9999995 29301 3374 27526 55064;55065;55066;55067 44443;44444;44445;44446 44443 4 9606 Homo sapiens 0.06838281303225813 VLPIQDNVSK Unmodified 1111.6237 0.62372375 1252 A0A140VKG4;Q9NRY5;E5RK42;E5RHP2;E5RHI8;E5RFK2;E5RGF9;I6L9D5 FAM114A2 Protein FAM114A2 yes no 0 0 0 7 0 1 52.077 52.151 2 0.0047905 14546 20230619_1887_Aki_TMTPro18x_K_F7 103.7 70.86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29302 1252 27527 55068 44447 44447 1 9606 Homo sapiens 0.07237683677522 VLPLEALVTDAGEVTEAGK Unmodified 1911.0201 0.020073325 2863 E1NZA1;Q92616;A0A024RBS1;B4DM32 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 4.33 1.49 1 1 1 1 2 65.542 65.57 3 4.457E-12 20573 20230619_1886_Aki_TMTPro18x_K_F6 142.94 131.89 20235 16924 18024 18872 16985 18723 19809 20660 19771 22437 24459 21346 25341 17474 22925 24164 24873 22624 18696 15511 18483 18907 17802 18994 19820 21017 20340 22534 24892 21604 25690 18525 23467 24085 23764 21513 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 285900000 29303 2863 27528 55069;55070;55071;55072;55073;55074 44448;44449;44450 44450 3 9606 Homo sapiens 0.10100409147025857 VLPMNTGVEAGETACK Unmodified 1675.7909 0.79094179 1194 A0A140VJQ4;P04181 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes no 0 0 0 5.5 0.5 1 1 52.575 52.651 3 4.6119E-08 14875 20230619_1885_Aki_TMTPro18x_K_F5 125.28 112.9 161840 129540 149690 142160 148820 170940 166690 158890 213930 181930 181750 173870 206670 165000 179250 195620 195840 216470 149540 118730 153030 142980 155290 170430 168470 163760 213930 182490 189010 176620 208780 172220 183760 197200 187370 205310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 478300000 29304 1194 27529 55075;55076 44451 44451 1 9606 Homo sapiens -0.019922046221836354 VLPMVPAPPGSSAAAAR Unmodified 1590.8552 0.85519702 2992 F8W8C1;Q6ZTA4;Q6ZTA4-2 TRIM67 Tripartite motif-containing protein 67 yes no 0 0 0 4 0 1 55.371 55.382 3 0.085658 16336 20230619_1883_Aki_TMTPro18x_K_F4 35.942 25.89 56985 53361 57989 57789 54207 58181 71666 63257 86043 64705 65105 71309 79015 65200 86016 82291 73615 88463 52748 48874 58776 58041 57066 58946 71651 64342 85945 65562 68472 71899 80518 68380 86643 82775 70657 83903 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50982000 29305 2992 27530 55077 44452 44452 1 9606 Homo sapiens 0.083403633169155 VLPNLPCVVQEGAIVMAR Unmodified 1965.054 0.053973186 920 B4DI71;D3DWK4;A0A0A0MQS1;Q53H96 PYCRL Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 3 yes no 0 0 0 3 0 1 64.146 64.178 3 0.059064 20202 20230619_1882_Aki_TMTPro18x_K_F3 40.744 25.205 17235 14458 16477 19686 13183 19373 17659 17998 20638 21266 22819 23717 24791 23749 19513 24932 25548 32109 15934 13277 16777 19439 14117 19566 17645 18575 20944 21396 23396 23968 25011 24559 20300 25419 24432 30397 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58652000 29306 920 27531 55078 44453 44453 1 9606 Homo sapiens 0.1100483583343248 VLPPPAGYVPIR Unmodified 1277.7496 0.74959297 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 0 4 0 1 56.414 56.422 2 0.00061389 16828 20230619_1883_Aki_TMTPro18x_K_F4 101.43 59.778 108180 89233 105380 120590 104000 123010 121590 111910 113020 122860 121540 124930 130090 110220 120230 137620 139400 145940 100010 81945 107370 119190 108620 123910 121320 115450 116040 123630 124720 126240 132050 115650 123580 138270 133230 138500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251830000 29307 3309 27532 55079 44454 44454 1 9606 Homo sapiens 0.12182815253595436 VLPSEQESTK Unmodified 1116.5663 0.56626845 4397 Q96T23-2;Q96T23;Q96T23-3 RSF1 Remodeling and spacing factor 1 yes no 0 0 0 4 0 1 43.167 43.211 3 0.070077 11014 20230619_1883_Aki_TMTPro18x_K_F4 41.704 21.943 44728 30068 42083 44735 52884 58115 50893 57030 68443 54064 55449 52145 56299 51198 52992 55479 63361 55270 41293 27666 43149 44132 54057 57703 51971 58220 68182 54774 57514 53009 57315 53059 54525 55672 60467 52527 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24513000 29308 4397 27533 55080 44455 44455 1 9606 Homo sapiens 0.012647966812892264 VLPSFWIPSLTPEAK Unmodified 1683.9236 0.92359417 796 A8K670;A0A075B6F9;Q9Y314;M0R3B2;A0A075B797 NOSIP Nitric oxide synthase-interacting protein yes no 0 0 0 4.5 0.5 1 1 65.336 65.362 3 0.0083737 20560 20230619_1883_Aki_TMTPro18x_K_F4 66.215 44.187 12119 12814 13539 16043 13828 16833 16177 14953 15817 17359 20008 17467 15377 15928 18286 20867 18688 23728 11238 11748 13659 15942 14406 16915 16166 15477 16299 17416 20118 17692 15997 16736 18583 21039 17911 22488 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24596000 29309 796 27534 55081;55082 44456 44456 1 9606 Homo sapiens 0.1089893116843541 VLPSIVNEVLK Unmodified 1209.7333 0.7332742 4405 Q99623;F5GY37;Q99623-2;J3KPX7;F5GWA7;B4DW05;A0A976LZI3;A0A7I2V5F0;F5H3X6 PHB2 Prohibitin-2 yes no 0 0 0 2 0 1 63.926 63.934 2 7.7958E-17 20362 20230619_1881_Aki_TMTPro18x_K_F2 182.64 130.64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29310 4405 27535 55083 44457 44457 1 9606 Homo sapiens 0.13679689296827746 VLPTHDASK Unmodified 966.51345 0.51344502 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 0 0 6.5 0.5 1 1 37.589 37.66 3 2.6166E-05 8322 20230619_1887_Aki_TMTPro18x_K_F7 156.83 117.8 52681 29097 63235 62467 134970 141320 87530 103960 121370 48557 90262 82159 65333 61272 79072 38587 79825 69160 48695 26943 64426 61275 133220 135970 92028 107190 120210 53217 92935 81209 68169 62685 79973 40999 76295 65404 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127440000 29311 3484 27536 55084;55085 44458 44458 1 9606 Homo sapiens 0.028848834091377284 VLPTIPK Unmodified 766.49528 0.49527576 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258 COPB2 Coatomer subunit beta' yes no 0 0 0 2.5 0.5 1 1 53.771 53.812 2 0.0057238 15835 20230619_1882_Aki_TMTPro18x_K_F3 138.62 73.75 180220 146500 168670 175470 178580 189670 202570 177540 224000 209210 195660 216100 240120 187260 187090 228250 237170 206930 166550 134380 172500 175040 185320 190490 203450 183150 225930 210000 204140 218020 241080 196330 194150 227420 226230 196880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 286280000 29312 3031 27537 55086;55087 44459 44459 1 9606 Homo sapiens 0.10268793225088757 VLPTQPNPVDASR Unmodified 1392.7361 0.73612775 3095 H7C5A2;A0A8I5KXE1;A0A8I5KQA0;A0A8I5KTE8;A0A8I5KRL9;A0A8I5KW55;Q8N766-4;Q8N766-3;Q8N766-2;Q8N766 EMC1 ER membrane protein complex subunit 1 yes no 0 0 0 6.5 0.5 1 1 46.636 46.721 2 1.7685E-05 12052 20230619_1887_Aki_TMTPro18x_K_F7 152.7 132 61550 55643 64348 68441 80949 86993 77895 74247 90923 82774 80892 79058 86745 66552 80278 91456 87684 79538 56972 51032 65410 68299 82671 86275 79101 76956 91507 83110 83715 80026 88002 70398 82213 90808 83768 75702 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47885000 29313 3095 27538 55088;55089 44460;44461 44461 2 9606 Homo sapiens 0.05546912683712435 VLPTYDASK Unmodified 992.51786 0.51786169 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 7 0 1 49.541 49.625 2 0.0026776 13426 20230619_1887_Aki_TMTPro18x_K_F7 104.2 47.023 59850 49347 55168 68819 63834 72484 67935 70365 80129 56510 63242 51653 66995 53411 64388 71185 77700 65649 55309 45332 56650 67912 65769 72942 68627 71663 80190 57757 65774 52818 68135 55994 66286 70918 74130 62457 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20463000 29314 3299 27539 55090 44462 44462 1 9606 Homo sapiens 0.021303478320419345 VLQALEGLK Unmodified 969.58588 0.58588168 2186 B0ZBD0;Q8WVX7;P39019;A0A075B6E2 RPS19 40S ribosomal protein S19 yes no 0 0 0 1.33 0.471 2 1 62.834 62.839 2;3 0.0010789 19883 20230619_1881_Aki_TMTPro18x_K_F2 129.1 88.07 504210 410980 445400 544540 441010 582140 536120 506490 601970 421130 398680 323280 361420 286880 431980 454710 415950 321230 465770 377350 458030 539170 461920 583730 536880 520560 600840 427610 416680 331920 373380 305970 437250 446730 397480 306860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288560000 29315 2186 27540 55091;55092;55093 44463;44464 44464 2 9606 Homo sapiens 0.09987217482716915 VLQAQGSSDPEEESVLYSNR Unmodified 2207.0342 0.03421984 3941 Q15785;Q6ZPD0 TOMM34 Mitochondrial import receptor subunit TOM34 yes no 0 0 0 2 0.816 1 1 1 51.945 51.979 3 9.656E-81 15301 20230619_1881_Aki_TMTPro18x_K_F2 338.14 315.83 27953 22152 24790 28092 28807 29963 31076 33731 35730 38935 42422 35480 43735 34154 37924 43401 44234 45932 25818 20332 25526 27909 29661 30247 31355 34322 36417 38955 43215 36167 44298 35790 39044 43588 42273 43594 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188570000 29316 3941 27541 55094;55095;55096 44465 44465 1 9606 Homo sapiens -0.021015901626014966 VLQATVVAVGSGSK Unmodified 1314.7507 0.75071518 1453;4826 A0A384N6A4;P61604;Q9UNM1;B8ZZL8;A0A024R3X7;S4R3N1 HSPE1;EPFP1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial no no 0 0 0 4.75 1.56 2 2 2 1 1 56.106 56.148 2;3 5.123E-22 16848 20230619_1882_Aki_TMTPro18x_K_F3 272.59 216.91 719770 609500 668620 788030 726810 832880 844070 803900 902560 902350 851870 858550 903400 765020 770960 894350 879130 893080 665310 559400 685180 781540 753770 838020 845900 826040 914480 905340 878670 870240 914150 799170 792950 896290 840200 848210 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 24970000000 29317 1453;4826 27542 55097;55098;55099;55100;55101;55102;55103;55104 44466;44467;44468;44469;44470 44466 5 9606 Homo sapiens 0.1059298483182829 VLQDLVPDDRK Unmodified 1296.7038 0.70376498 3013 G3XAG1;Q96ME7-3;Q96ME7;B4DES6;B7Z9P6;Q96ME7-2;Q658M0;B4E0X7 ZNF512;DKFZp666L156 Zinc finger protein 512 yes no 0 0 1 5.5 0.5 1 1 52.31 52.386 3 1.2535E-05 14950 20230619_1886_Aki_TMTPro18x_K_F6 119.69 97.156 198350 170570 196010 225390 214570 229890 242920 228860 259900 214760 236090 265440 265560 230580 240980 257280 261640 297280 183450 156580 199790 223120 222090 232090 243760 233610 262740 219410 244870 265950 268990 240420 246720 260310 250380 281800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281090000 29318 3013 27543 55105;55106 44471;44472 44472 2 9606 Homo sapiens 0.06728125280687891 VLQDMGLPTGAEGR Oxidation (M) 1458.7137 0.71367774 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;B4DDF3 ILF3 Interleukin enhancer-binding factor 3 yes no 0 1 0 4 0 1 47.364 47.407 3 0.0010918 12780 20230619_1883_Aki_TMTPro18x_K_F4 73.775 62.161 85523 78390 78498 96166 96722 85925 95976 84496 99084 87484 87072 101140 103740 91869 95235 100530 101850 95923 79086 71888 80682 95506 98839 87705 96876 86583 100310 88697 90747 101700 104980 95492 97380 100630 97348 91179 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 355800000 29319 3823 27544 55107 44473 44473 2508 1 9606 Homo sapiens 0.0026694522373418295 VLQDMGLPTGAEGR Unmodified 1442.7188 0.71876312 3823 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;B4DDF3 ILF3 Interleukin enhancer-binding factor 3 yes no 0 0 0 5 0.816 1 1 1 56.315 56.363 2 1.4986999999999999E-21 16409 20230619_1885_Aki_TMTPro18x_K_F5 222.72 189.34 245010 200540 254040 244680 212750 263630 258930 263350 276460 305780 301840 310750 340360 290470 282500 322050 310040 329180 226630 183970 256670 243800 225670 265090 259080 270170 281850 306850 310210 314500 343390 301990 290020 323430 296510 312510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 797870000 29320 3823 27544 55108;55109;55110 44474 44474 1 9606 Homo sapiens 0.015112490863657513 VLQGDLVMNVYR Oxidation (M) 1421.7337 0.7336849 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 1 0 1 0 1 54.929 54.929 3 0.00010875 16448 20230619_1880_Aki_TMTPro18x_K_F1 105.65 73.715 30337 25618 26133 29858 32104 31122 33475 28937 29804 30906 30443 26140 33237 24534 31703 28381 32518 29119 28026 23488 27006 29822 32870 31343 33550 29781 30616 30984 31307 26709 33733 25590 32288 28513 31081 27662 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49280000 29321 3606 27545 55111 44475 44475 2286 1 9606 Homo sapiens 0.03968740954405803 VLQGDLVMNVYR Unmodified 1405.7388 0.73877028 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 2 0 1 59.625 59.637 2 3.7892E-12 18466 20230619_1881_Aki_TMTPro18x_K_F2 175.49 130.41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29322 3606 27545 55112 44476 44476 1 9606 Homo sapiens 0.05213044817014634 VLQHYQESDKGEELGPGNVQK Unmodified 2354.1503 0.15025265 3996 Q53G34;Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 yes no 0 0 1 5 0 1 46.064 46.141 5 7.632E-05 12100 20230619_1885_Aki_TMTPro18x_K_F5 87.49 75.057 50494 55744 60822 67143 65735 81498 77161 61897 80694 71861 77494 85142 89352 71183 71907 84918 82024 77123 46871 51081 61064 67037 68224 80857 77205 64914 81862 72535 80223 85343 89960 74610 74054 84651 78348 73352 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92550000 29323 3996 27546 55113 44477 44477 1 9606 Homo sapiens 0.027343534080955578 VLQLFTR Unmodified 875.52289 0.52288749 2356 B4E0B7;B3KMS0;Q15021;B3KY03;E7EN77;Q6ZV00 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 6 0 1 60.215 60.273 2 0.007007 18206 20230619_1886_Aki_TMTPro18x_K_F6 128.57 110.8 165950 129020 134630 135030 125940 155310 148170 148000 181050 101580 84812 63049 87373 68996 118370 105010 92324 73118 153160 118220 139250 136220 132360 155350 149080 150450 178520 104140 91595 66117 90561 72895 118310 103210 88454 69856 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172540000 29324 2356 27547 55114 44478 44478 1 9606 Homo sapiens 0.08014696485327022 VLQLINDNTATALSYGVFR Unmodified 2094.111 0.11095402 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2;A0A024R3G0;J3KTF1 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 5 0 1 65.346 65.39 3 1.9068E-49 20313 20230619_1885_Aki_TMTPro18x_K_F5 279.54 244.72 38270 28485 35061 44155 38234 42790 40740 40692 45065 45626 47269 50433 50237 44651 45690 43302 51924 61991 35342 26212 35986 43252 39544 43306 41072 41863 45767 45993 48548 50755 50977 46202 46873 44589 49690 58645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 480280000 29325 874 27548 55115 44479 44479 1 9606 Homo sapiens 0.10766297915188261 VLQLSDTAIVPIGYHVPR Unmodified 1977.1047 0.10474643 974 P57737-3;A0A0A6YYL4;P57737;P57737-4;P57737-2;B3KSY4;B3KUH7;I3L167;B4E0F2;E7EP81;I3L212 CORO7;CORO7-PAM16;hCG_1787779 Coronin-7;Coronin yes no 0 0 0 3 0 1 60.974 61.003 3 2.9917000000000002E-30 18817 20230619_1882_Aki_TMTPro18x_K_F3 223.07 162.67 24236 17240 23467 23330 22661 26182 24162 24274 27357 24631 24403 21445 25442 21390 26627 29261 26855 27384 22386 15842 23890 23097 23656 26208 24381 24938 27570 24786 25210 21939 25990 22486 27083 29164 25696 26028 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90207000 29326 974 27549 55116 44480 44480 1 9606 Homo sapiens 0.15527824474270346 VLQLTSWDEDAWASK Unmodified 1747.8417 0.84171503 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9;P18206-3 VCL;HEL114 Vinculin yes no 0 0 0 6.5 0.5 1 1 63.592 63.632 3 0.064288 19504 20230619_1887_Aki_TMTPro18x_K_F7 40.983 30.196 79041 51332 74290 80360 75116 102480 86970 87572 94626 86836 92924 86795 78800 55344 103730 101980 82517 78808 72956 47269 75940 79005 78442 101510 87250 90461 95859 87790 94816 87118 81958 60604 103870 100430 79131 75111 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 213820000 29327 51 27550 55117;55118 44481 44481 1 9606 Homo sapiens -0.002292159813350736 VLQLYPNNK Unmodified 1087.6026 0.60259438 3789 Q02790;B2R9U2;H0YFG2 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes no 0 0 0 3 0 1 53.587 53.639 3 0.01245 15732 20230619_1882_Aki_TMTPro18x_K_F3 68.224 41.109 210570 170200 202840 208370 191780 244670 247530 179890 222350 259950 290270 223620 245550 210340 275710 295080 293140 295100 194630 156150 206640 207730 201730 243120 245490 190590 230690 257350 292310 228530 253470 221940 280910 295080 280320 280280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 550080000 29328 3789 27551 55119 44482 44482 1 9606 Homo sapiens 0.06229718368649628 VLQPTVFPVVPR Unmodified 1350.8024 0.80235682 2140 B7Z3Z9;E7EPM6;P33121;P33121-2;A8K9T3;B4E0R0;P33121-3;H0Y9Z9;A0A994J7S4;D6RER0;Q108N2;Q108N1 ACSL1 Long-chain-fatty-acid--CoA ligase 1 yes no 0 0 0 5 0 1 60.864 60.914 2 5.9466E-13 18257 20230619_1885_Aki_TMTPro18x_K_F5 210.08 181.65 97727 103160 93252 99510 80591 102370 88619 84940 132050 132950 162530 157880 151160 142760 168410 165330 173250 186810 90495 94363 94951 100890 85131 102960 90274 89310 133230 132600 164820 158680 155540 148910 171200 166990 165810 177160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152190000 29329 2140 27552 55120 44483 44483 1 9606 Homo sapiens 0.14098773316413826 VLQQFADNDVSR Unmodified 1390.6841 0.68409218 1097 P51659;A0A0S2Z4J1;B2R659;E7EPL9;A0A804HK65;A0A2R8YD50;P51659-2;P51659-3;B4DSD0;B4DDM5;A0A804HKU2;A0A2R8Y7L2;B4DI68;E7ET17;B3KSP2;A0A804HIR1;Q59H27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 0 0 0 4.5 0.5 1 1 52.175 52.224 2 3.2963E-09 14744 20230619_1885_Aki_TMTPro18x_K_F5 175.49 157.59 63758 40014 46616 55469 56522 75418 59296 53252 79606 79380 99112 106810 82869 80815 79029 106050 96121 103400 58739 36800 48999 54962 58187 74196 60240 56657 80684 79681 100090 106310 84989 85473 81531 105940 91853 98215 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90484000 29330 1097 27553 55121;55122 44484 44484 1 9606 Homo sapiens 0.00437749269917731 VLQSALAAIR Unmodified 1040.6342 0.63422886 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 5 0 1 61.121 61.171 2 0.00010602 18392 20230619_1885_Aki_TMTPro18x_K_F5 146.88 102.12 260280 221790 227980 197450 353530 465810 320750 348570 473360 40497 47924 47738 45038 37377 143310 60911 56960 47444 240490 202890 236120 205060 357380 447760 329620 355620 455210 58584 69253 48119 50879 40114 138770 60341 55268 45240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191170000 29331 2621 27554 55123 44485 44485 1 9606 Homo sapiens 0.11553711122587629 VLQSDEYEEVEDK Unmodified 1581.7046 0.70461243 3244 O15397-2;O15397;Q59F59 IPO8 Importin-8 yes no 0 0 0 1 0 1 52.188 52.188 3 8.5121E-11 15261 20230619_1880_Aki_TMTPro18x_K_F1 170.95 160.42 48229 34195 37158 43888 42868 52212 41363 49570 52379 55626 56869 50468 56989 47061 48716 66175 64052 62810 44474 31404 38795 43623 44123 52086 42161 50949 52943 55731 58086 51404 57772 49678 50627 65946 61128 59697 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96818000 29332 3244 27555 55124 44486 44486 1 9606 Homo sapiens -0.06297169651566037 VLQSEFCNAVR Unmodified 1321.6449 0.6448699 3005 G3V1D4;Q53FX5;Q9NUP9 LIN7C Protein lin-7 homolog C yes no 0 0 0 7 0 1 51.805 51.879 2 1.7372E-06 14426 20230619_1887_Aki_TMTPro18x_K_F7 185.33 162.75 119850 103070 129900 135470 118540 139680 128180 133240 145090 146750 141040 149530 154160 124370 140920 168260 159590 166260 110930 94608 130990 134190 124340 140750 129270 136930 146760 147650 145540 150820 156270 131470 144720 168180 152560 157910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168680000 29333 3005 27556 55125 44487 44487 1 9606 Homo sapiens -0.003086742852929092 VLQSFTVDSSK Unmodified 1209.6241 0.62411768 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 8 0 1 55.715 55.777 3 0.00012149 16042 20230619_1888_Aki_TMTPro18x_K_F8 117.98 94.749 59387 43421 55495 54798 53324 62747 61174 55178 75800 69225 71215 66536 73694 64165 70874 84643 71688 70432 54847 39865 56666 54512 55831 62666 61669 57282 76196 69163 73364 67635 75012 67322 72242 83898 68574 67052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70032000 29334 3299 27557 55126 44488 44488 1 9606 Homo sapiens 0.027690586066910328 VLQSPATTVVR Unmodified 1169.6768 0.67682195 4270 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 1.5 0.5 1 1 45.692 45.732 2 0.0048603 12492 20230619_1881_Aki_TMTPro18x_K_F2 105.52 78.408 84941 74699 100530 93290 116470 170390 126470 115500 184600 81821 91839 86235 89901 77405 90232 97573 102760 88489 78698 68525 101090 93656 120380 165040 128610 120870 180710 84913 98466 87136 91903 81181 92474 97206 98104 84196 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83404000 29335 4270 27558 55127;55128 44489 44489 1 9606 Homo sapiens 0.09877061460156256 VLQTEQAVK Unmodified 1014.571 0.5709599 2940 E9PNP3;Q9H7C9;E9PR47;E9PIQ4 AAMDC Mth938 domain-containing protein yes no 0 0 0 5.5 0.5 1 1 45.363 45.449 2 0.0022212 11891 20230619_1886_Aki_TMTPro18x_K_F6 120.99 77.742 59566 34159 65257 57950 77367 92331 69636 65204 89250 74740 77458 86808 83719 73418 71648 63229 100370 91761 55020 31509 65961 56975 79268 90075 71259 68735 89330 75453 80353 87034 84722 75667 74595 65335 95700 86885 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87588000 29336 2940 27559 55129;55130 44490;44491 44491 2 9606 Homo sapiens 0.06425725614701605 VLQVSFK Unmodified 819.48544 0.48543935 1058;3893;945 Q96J71;Q14576;Q14576-2;P26378-4;A0A494C0F8;P26378;P26378-3;P26378-1;P26378-5;P26378-2;A0A494C147;B1APY9;A0A494C1D9;A0A0R4J2E6;B7Z5E0;A0A0A0MRX1;Q12926-2;Q12926 ELAVL3;ELAVL4;ELAVL2 ELAV-like protein;ELAV-like protein 3;ELAV-like protein 4;ELAV-like protein 2 no no 0 0 0 3.33 0.471 2 1 55.839 55.869 2;3 0.0072471 16700 20230619_1882_Aki_TMTPro18x_K_F3 97.602 69.495 418250 363250 382710 465940 385470 429670 414030 416180 468740 278250 269260 238460 270730 215390 404210 300000 320480 242120 386620 333330 392250 461500 401110 436880 417450 422620 465930 287720 285860 243430 282550 227440 403450 297230 306900 230870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 742200000 29337 3893;1058;945 27560 55131;55132;55133 44492;44493 44492 2 9606 Homo sapiens 0.0684760521970702 VLRPPGGGSNFSLGFDEPTEQPVR Unmodified 2555.2769 0.27685015 4675 Q9UK76;J3KT51;Q9UK76-2 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes no 0 0 1 7.5 0.5 1 1 56.43 56.488 3 1.6416E-19 16315 20230619_1887_Aki_TMTPro18x_K_F7 157.83 149.12 116990 86416 103120 120590 87849 108320 113460 115010 128480 137230 133470 142540 157390 130520 127290 165530 150400 165760 108000 79421 105790 118780 93279 110570 113410 117660 130310 137640 137800 144070 158440 136900 131460 165670 143790 157380 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 552090000 29338 4675 27561 55134;55135 44494;44495;44496;44497 44494 4 9606 Homo sapiens 0.061422796332408325 VLRPPGGGSNFSLGFDEPTEQPVRK Unmodified 2683.3718 0.37181317 4675 Q9UK76;J3KT51;Q9UK76-2 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes no 0 0 2 1.5 0.5 1 1 53.487 53.501 4 0.016955 15739 20230619_1881_Aki_TMTPro18x_K_F2 49.318 40.271 84164 72238 82817 85851 74033 87044 84351 83641 97053 105820 93330 84754 106340 84324 90472 117920 91071 99592 77838 66241 84129 85615 77927 87856 84872 86274 98095 105110 96437 87038 107320 88798 92469 116850 87189 94756 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2158000000 29339 4675 27562 55136;55137 44498 44498 1 9606 Homo sapiens 0.09746213104426715 VLRPQVTAVAQQNQGEVPEPQDMK Oxidation (M) 2677.3494 0.34936316 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 1 6 0 1 47.398 47.479 4 0.00022172 12833 20230619_1886_Aki_TMTPro18x_K_F6 73.981 58.475 33938 29060 36275 35456 34005 37003 32781 38062 39645 38502 46642 47648 43611 35226 37665 40566 41239 38647 31409 26654 36609 35313 35468 37328 33375 38815 40268 39153 47389 47530 44305 37023 38617 40571 39404 36737 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118450000 29340 3881 27563 55138 44499 44499 2563 1 9606 Homo sapiens 0.0777824564452203 VLRPQVTAVAQQNQGEVPEPQDMK Unmodified 2661.3544 0.35444854 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 6.5 0.5 1 1 50.671 50.75 4 4.6176E-05 13930 20230619_1887_Aki_TMTPro18x_K_F7 87.511 74.056 46136 38168 42859 50931 38155 54511 52733 43918 46306 62471 61025 53439 52645 51832 59710 53678 58543 71793 42638 35046 43811 50405 40473 54573 52123 46125 48177 61852 61526 54598 54368 53632 60500 54942 56117 67949 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 298030000 29341 3881 27563 55139;55140 44500 44500 1 9606 Homo sapiens 0.09022549507153599 VLSAMIR Unmodified 788.45784 0.4578444 3030 H0Y8X4;O43598 DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 yes no 0 0 0 4 0 1 52.135 52.159 2 0.070766 14989 20230619_1883_Aki_TMTPro18x_K_F4 76.847 32.236 268690 234420 242160 241770 249870 313520 281930 275120 374900 115860 152690 130660 105670 104480 255120 140670 130980 122380 248350 214670 248370 244620 260310 310660 285090 279490 366790 126600 165190 131380 116540 110430 249320 140140 126460 116470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61815000 29342 3030 27564 55141 44501 44501 1 9606 Homo sapiens 0.055153786878122446 VLSAPPHFHFGQTNR Unmodified 1706.8641 0.86412223 3510 Q53YD7;P26641;P26641-2;B4DUK7;B4DSR4;Q2F838 EEF1G Elongation factor 1-gamma yes no 0 0 0 4.5 0.5 1 1 45.124 45.185 4 1.4936E-18 11648 20230619_1885_Aki_TMTPro18x_K_F5 198.81 180.67 131310 103830 118060 123630 121300 132630 141240 121710 148210 140000 152200 155230 155270 124510 143960 144670 164340 175430 121290 95239 121120 123360 126280 133210 141430 125660 150720 140990 156130 155820 157800 130600 147720 146770 157120 166260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 750550000 29343 3510 27565 55142;55143 44502;44503 44503 2 9606 Homo sapiens 0.03896472997598721 VLSDVDAFIAYVGTDQK Unmodified 1839.9254 0.92544466 2082 A8K5Y7;Q9HAV4;B3KPQ5;B3KNC6;Q9H8N6 XPO5 Exportin-5 yes no 0 0 0 7.5 0.5 1 1 65.882 65.904 3 2.2522E-13 20559 20230619_1887_Aki_TMTPro18x_K_F7 149.3 130.99 19834 17542 19721 21953 16935 16584 17706 20221 19045 21648 20336 18867 26772 19550 21900 28202 24198 27454 18349 16092 20008 21742 17815 17269 17870 20446 19402 21708 21075 19326 26867 20620 22518 28137 23153 26072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25835000 29344 2082 27566 55144;55145 44504 44504 1 9606 Homo sapiens 0.039078953956959595 VLSEAAISASLEK Unmodified 1316.7187 0.71874635 284 B3KN05;A0A7P0TA76;B2RBE0;A0A024R487;O95573;A0A7P0TBB1;B3KMA6;A0A7P0T8L6;Q6PIM8 ACSL3 Long-chain-fatty-acid--CoA ligase 3 yes no 0 0 0 6.5 0.5 1 1 60.123 60.177 3 0.00076078 17878 20230619_1887_Aki_TMTPro18x_K_F7 88.552 56.618 79203 57560 81677 85045 61091 63632 73391 67906 83702 87906 89792 80634 91073 80109 76109 95318 84160 92576 73205 52940 82460 83332 65385 66068 73648 69672 84952 87552 91818 82210 92213 83452 78212 95334 80504 87928 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72165000 29345 284 27567 55146;55147 44505 44505 1 9606 Homo sapiens 0.07305572358018253 VLSEDAIR Unmodified 901.4869 0.48689592 3498 Q6FGU2;P23919;Q53F55;P23919-2;H7C312 DTYMK Thymidylate kinase yes no 0 0 0 3.5 0.5 1 1 44.87 44.929 2 0.028756 11736 20230619_1882_Aki_TMTPro18x_K_F3 81.191 40.27 159930 123390 109830 139110 143050 174280 162010 148140 174680 155760 173900 175910 180770 170800 156110 192630 205000 203280 147450 113140 116450 139620 146720 172950 162560 153380 177140 157710 178760 177560 183270 177440 162070 193720 195660 192970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 725220000 29346 3498 27568 55148;55149 44506 44506 1 9606 Homo sapiens 0.03221194517789172 VLSEPNPR Unmodified 910.48723 0.48723027 2980 F8VPD4;P27708;Q53SY7 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 4.5 0.5 1 1 38.225 38.293 2 0.0020058 8827 20230619_1883_Aki_TMTPro18x_K_F4 133.6 110.77 83861 53510 84950 89758 109240 149930 104400 108480 141190 121800 133340 161450 148250 124070 128520 122390 161030 174070 77445 49324 86643 88354 111710 145940 106670 113990 141410 123660 138000 160680 149910 129200 132790 125930 153850 164740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59651000 29347 2980 27569 55150;55151 44507;44508 44507 2 9606 Homo sapiens 0.028406142376638854 VLSGTIHAGQPVK Unmodified 1305.7405 0.74048484 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 3.33 1.25 1 1 1 44.235 44.313 3 5.7695E-05 11542 20230619_1882_Aki_TMTPro18x_K_F3 110.38 62.376 132140 124070 145290 152550 195500 204700 185040 177780 177350 166590 182550 143080 133870 105780 187480 132750 155100 131880 122400 113770 147300 152380 198620 202440 186930 183140 181290 168240 184770 145140 140620 111840 187600 133110 148550 125360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138150000 29348 2436 27570 55152;55153;55154 44509;44510 44509 2 9606 Homo sapiens 0.09984421897252105 VLSHQDDTALLK Unmodified 1338.7143 0.71432967 4313 Q93034;L0L6D8 CUL5 Cullin-5 yes no 0 0 0 5.5 0.5 1 1 47.763 47.841 3 1.6974E-06 12824 20230619_1885_Aki_TMTPro18x_K_F5 144.51 98.438 167600 130330 147820 178730 169390 170260 189500 188830 216390 164200 159800 159960 180130 144640 176960 168510 161820 176420 154780 119730 152320 176360 174710 173240 190670 191000 216550 167210 167560 162090 182990 151030 179120 169430 155080 167420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239580000 29349 4313 27571 55155;55156 44511 44511 1 9606 Homo sapiens 0.05852107935129425 VLSIGDGIAR Unmodified 999.57129 0.57129425 3504 V9HW26;P25705;P25705-2;P25705-3;K7EK77;B4DGW3;K7ERX7;K7EJP1;K7EQH4 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 7.5 0.5 1 1 52.587 52.661 2 7.475E-15 14654 20230619_1888_Aki_TMTPro18x_K_F8 242.09 191.12 768780 644760 677350 733840 760240 805170 909440 910460 930300 919150 911560 932560 1082500 881230 891020 1041400 934510 1020200 710280 591040 697360 735040 786860 811390 908840 922910 946110 928740 943750 944550 1090000 919360 912670 1042400 894310 968900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5721400000 29350 3504 27572 55157;55158 44512;44513 44513 2 9606 Homo sapiens 0.07149145334562945 VLSLDDYFITEVEK Unmodified 1669.8451 0.84506907 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1;F8VU51;H0YI23;B4DMQ9 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 0 5 0 1 64.752 64.797 3 8.911E-06 20083 20230619_1885_Aki_TMTPro18x_K_F5 117.93 95.054 14503 11094 14854 18186 14932 19811 13818 15887 18903 31562 32301 38487 39029 34169 22504 43355 43697 54951 13408 10215 15083 17785 15509 19805 14176 16918 19562 31251 32820 38598 38858 35887 24463 43995 41682 52029 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29675000 29351 3610 27573 55159 44514 44514 1 9606 Homo sapiens 0.036940340726232535 VLSNRPIMFR Unmodified 1231.6859 0.68594685 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2V5M7;B7Z8K4;Q6ZP53;A0A7I2YQH0;A0A7I2YQF2 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 0 1 8 0 1 47.222 47.271 3 8.2167E-05 12368 20230619_1888_Aki_TMTPro18x_K_F8 117.02 69.955 171910 166410 163820 178550 165610 243510 190610 197840 260750 43232 45593 48018 53682 43234 56590 59953 53577 47661 159080 152390 167290 180180 173170 240100 192750 201130 252340 52576 57293 48542 54770 45624 57344 59286 51250 45421 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75357000 29352 3846 27574 55160 44515 44515 1 9606 Homo sapiens 0.07937131544849763 VLSPYDLTHK Unmodified 1171.6237 0.62372375 4616 Q9NX20 MRPL16 39S ribosomal protein L16, mitochondrial yes yes 0 0 0 1 0 1 51.386 51.386 3 3.8831E-05 14946 20230619_1880_Aki_TMTPro18x_K_F1 141.1 105.55 30649 25048 29697 33489 34361 37555 35880 36925 41408 40709 37879 34307 44321 38827 38509 35509 42337 46521 28333 23000 30341 33172 35366 37648 36260 37857 41753 40756 39287 35269 44763 39753 39454 36365 40500 44054 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119870000 29353 4616 27575 55161 44516 44516 1 9606 Homo sapiens 0.04477683677487221 VLSQPMPPTAGEAEQAADQQER Oxidation (M) 2368.0965 0.09650252 4634 Q9NZL4;Q9NZL4-3;Q9NZL4-2;K7EL16;A0A024R4R7;K7ERT9;K7EKM6;K7EMM7 HSPBP1 Hsp70-binding protein 1 yes no 0 1 0 2 0 1 48.173 48.244 3 0.0077136 13620 20230619_1881_Aki_TMTPro18x_K_F2 58.015 47.895 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29354 4634 27576 55162 44517 44517 2837 1 9606 Homo sapiens -0.03282187085824262 VLSQQAASVVK Unmodified 1128.6503 0.65027285 914 P30566;A0A7P0T9A7;A0A7P0Z472;A0A096LNY6;X5D8S6;A0A1B0GTJ7;A0A1B0GWJ0;B4DP46;A0A0A6YY92;Q71UA4;A0A7P0T8E4;A0A096LNY5;B4DUM2 ADSL Adenylosuccinate lyase yes no 0 0 0 2 0 1 48.933 48.999 3 8.599E-05 13976 20230619_1881_Aki_TMTPro18x_K_F2 121.02 85.607 306470 250390 245520 264630 304700 354110 323410 321120 438660 194830 193980 193430 196170 140390 261340 205300 218140 172550 282920 229390 255530 267340 312810 350530 328280 326920 429820 204100 210780 194780 203160 150070 261890 203620 208820 164410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172720000 29355 914 27577 55163 44518 44518 1 9606 Homo sapiens 0.09109372568855179 VLSRPNAQELPSMYQR Oxidation (M) 1903.9574 0.95743026 4405 Q99623;F5GY37;Q99623-2;J3KPX7;F5GWA7;B4DW05;A0A976LZI3;A0A7I2V5F0;F5H3X6 PHB2 Prohibitin-2 yes no 0 1 1 1.5 0.5 1 1 42.764 42.804 3 0.00026342 11080 20230619_1881_Aki_TMTPro18x_K_F2 91.657 79.297 205560 180420 182030 223190 260050 255090 253540 274070 299530 247060 272070 263270 289420 230580 258700 232660 251210 262210 189990 165490 188280 222280 263620 256020 257400 277860 301330 251680 281120 265420 293220 239160 263040 235540 240510 248700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1186500000 29356 4405 27578 55164;55165 44519 44519 2766 1 9606 Homo sapiens 0.041609845978427984 VLSRPNAQELPSMYQR Unmodified 1887.9625 0.96251564 4405 Q99623;F5GY37;Q99623-2;J3KPX7;F5GWA7;B4DW05;A0A976LZI3;A0A7I2V5F0;F5H3X6 PHB2 Prohibitin-2 yes no 0 0 1 3 0 1 46.97 47.049 3 5.0171E-11 12780 20230619_1882_Aki_TMTPro18x_K_F3 155.79 126.82 1089500 916400 1080900 1190100 974230 1276800 1246300 1246400 1363400 1373900 1273600 1250900 1536700 1181500 1276500 1533200 1432400 1419400 1007600 841130 1098200 1180300 1029200 1283200 1244500 1278800 1379400 1378000 1322300 1273600 1546900 1240200 1312600 1528000 1368900 1349400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2108399999.9999998 29357 4405 27578 55166 44520;44521 44521 2 9606 Homo sapiens 0.05405288460474367 VLSSIEQK Unmodified 902.5073 0.50729701 3536 P31947-2;P31947 SFN 14-3-3 protein sigma yes no 0 0 0 6.5 1.12 2 2 2 2 48.818 48.895 2;3 0.00016183 13382 20230619_1886_Aki_TMTPro18x_K_F6 191.63 0 2589900 1555100 2296900 2459700 2738000 2901100 2624600 2635700 3193400 2818500 3444900 3543500 3442900 3038500 2613300 2305200 3914900 3400300 2388600 1432800 2365000 2414100 2806700 2893100 2670800 2716100 3229600 2861600 3521900 3544700 3476100 3113000 2741500 2391300 3729600 3219900 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 18675000000 29358 3536 27579 55167;55168;55169;55170;55171;55172;55173;55174 44522;44523;44524;44525 44523 4 9606 Homo sapiens 0.052143651776077604 VLSTEER Unmodified 832.42905 0.42904669 2150 B3KMC2;B3KMD2;A8KAE0;O75717-2;O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 yes no 0 0 0 2 0 1 36.239 36.297 2 0.023185 8195 20230619_1881_Aki_TMTPro18x_K_F2 90.777 41.187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29359 2150 27580 55175 44526 44526 1 9606 Homo sapiens 0.006129325923780016 VLSTTKPFEYETPEMEK Unmodified 2027.9762 0.9761596 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;Q16666-6;Q16666-8;H3BR88;H3BR65 IFI16 Gamma-interferon-inducible protein 16 yes no 0 0 1 7 0 1 56.393 56.451 3 4.2693E-09 16347 20230619_1887_Aki_TMTPro18x_K_F7 129.05 112.37 34276 24975 26462 40472 61745 89041 71684 75694 87526 78704 69912 92003 99947 78828 60337 112860 93452 99903 31613 22997 28208 40171 61807 85940 72105 78249 87601 79810 73978 92339 99175 83542 64171 111980 89139 95002 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124110000 29360 2829 27581 55176 44527 44527 1 9606 Homo sapiens 0.003290566583700638 VLSVAEVAATTATPDGGPR Unmodified 1810.9425 0.94249171 3902 Q147X3-2;Q147X3 NAA30 N-alpha-acetyltransferase 30 yes no 0 0 0 6 0 1 59.53 59.592 3 3.1387E-07 17977 20230619_1886_Aki_TMTPro18x_K_F6 105.06 92.345 14695 16190 19972 23564 18380 21764 22102 19344 24997 21459 17319 20950 18742 19749 23567 23740 20522 25363 13658 14867 19851 23152 19315 22080 22151 20005 24997 21571 18233 21239 19341 20610 23715 23882 19698 24055 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18408000 29361 3902 27582 55177 44528 44528 1 9606 Homo sapiens 0.06945816001484673 VLSVPESTPFTAVLK Unmodified 1586.892 0.89195969 3025 H0Y614;P61960 UFM1 Ubiquitin-fold modifier 1 yes no 0 0 0 2.5 0.5 1 1 63.241 63.26 3 0.00040568 19808 20230619_1882_Aki_TMTPro18x_K_F3 88.075 65.158 27982 30108 33446 33596 25289 33236 32206 22743 28810 36876 37674 35320 36389 33126 32190 33853 37457 42490 25967 27572 33406 33640 27111 33400 31972 24381 29925 36466 38165 35840 36993 34291 33109 34487 35823 40247 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212010000 29362 3025 27583 55178;55179 44529 44529 1 9606 Homo sapiens 0.12198938414462646 VLTAEELNAAQTSVAYGCIK Unmodified 2137.0725 0.072519601 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 61.841 61.874 3 8.9003E-08 18648 20230619_1887_Aki_TMTPro18x_K_F7 103.5 94.337 159640 154220 174020 155740 162770 171540 164610 170350 178820 152510 173810 201040 175440 172140 185870 243400 186600 227620 147890 141150 175270 157520 169910 172340 166420 173650 181090 156580 178880 201030 179670 182100 189200 242380 178820 216220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1314400000 29363 3650 27584 55180;55181 44530;44531 44530 2 9606 Homo sapiens 0.04946624218337092 VLTCTDLEQGPNFFLDFENAQPTESEK Unmodified 3128.4285 0.42846092 572 Q9NUQ9;A0A024R9G4;Q68D08;E5RI16;E5RJL8;E5RIR8;E5RJE1;E5RGI7;E5RHU5;E5RFS4;E5RK61;E5RH75;E5RK81 FAM49B;DKFZp686B04128 Protein FAM49B yes no 0 0 0 3.33 1.25 1 1 1 64.987 65.014 3;4 3.5516E-09 20177 20230619_1885_Aki_TMTPro18x_K_F5 112.74 105.78 13113 13253 12101 15648 12652 11925 10854 13905 12070 12417 16262 14564 16200 15145 14543 19146 14882 18709 12136 12145 12400 15558 13038 12395 11104 14030 12394 12691 16472 14732 16464 15806 14864 19137 14263 17760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 42978000 29364 572 27585 55182;55183;55184 44532;44533 44533 2 9606 Homo sapiens -0.05061616702550964 VLTEDEMGHPEIGDAIAR Oxidation (M) 1967.9259 0.92585536 3449 P14324-2;P14324;A0A087WVN4;B3KMW3;A0A087X1D8;A0A087WTP2 FDPS Farnesyl pyrophosphate synthase yes no 0 1 0 1.5 0.5 1 1 48.27 48.305 3 2.1465000000000003E-24 13623 20230619_1880_Aki_TMTPro18x_K_F1 212.59 195.1 333850 260380 373170 339630 440170 453190 427080 477140 530930 470380 504130 514040 541910 452290 487380 471450 564830 542860 308910 239070 376590 338090 451320 450190 434710 485270 533870 477120 520190 517690 549290 469740 500710 477560 539520 514940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1201300000 29365 3449 27586 55185;55186 44534;44535 44534 2096 2 9606 Homo sapiens -0.019390529467273154 VLTEDEMGHPEIGDAIAR Unmodified 1951.9309 0.93094074 3449 P14324-2;P14324;A0A087WVN4;B3KMW3;A0A087X1D8;A0A087WTP2 FDPS Farnesyl pyrophosphate synthase yes no 0 0 0 2 0.816 1 1 1 51.915 51.949 3 9.8871E-39 15277 20230619_1881_Aki_TMTPro18x_K_F2 256.45 239.37 514660 363080 398680 484050 303920 450830 489910 456470 494840 535600 493690 525700 596120 477920 485050 653130 608880 597520 474600 333590 413920 478320 329280 458180 483300 468270 504050 536670 511270 532610 599820 503910 502940 649880 581300 568160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1257100000 29366 3449 27586 55187;55188;55189 44536;44537;44538 44537 3 9606 Homo sapiens -0.006947490840957471 VLTEFTR Unmodified 864.47052 0.47051757 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 7 0.816 1 1 1 50.956 51.033 2 0.0043317 14023 20230619_1887_Aki_TMTPro18x_K_F7 148.98 108.3 349070 292670 307760 337960 339760 398430 347760 337460 378110 428660 452110 427020 435230 396250 403260 445320 479050 471110 322510 268320 316750 338370 350890 396930 351200 351410 386670 428270 459470 432580 443420 412300 415030 448060 457560 447220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 519370000 29367 4386 27587 55190;55191;55192 44539;44540 44539 2 9606 Homo sapiens 0.032861133517030794 VLTEIIASR Unmodified 1000.5917 0.59169534 3416 V9HWE0;P08758;D6RBL5;E9PHT9 HEL-S-7;ANXA5 Annexin;Annexin A5 yes no 0 0 0 3.67 3.09 1 1 1 58.08 58.101 2 0.00036554 16990 20230619_1888_Aki_TMTPro18x_K_F8 138.4 113.47 260330 237260 251510 307070 478340 565500 418940 388890 431260 473190 456050 448390 516910 422630 459230 522910 506390 517680 240820 217700 260110 307440 477560 547980 425960 411540 440160 473080 469390 455530 522790 442230 470940 523390 484130 491710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 464210000 29368 3416 27588 55193;55194;55195 44541;44542 44542 2 9606 Homo sapiens 0.09142315994370165 VLTFAYK Unmodified 840.47454 0.47454032 1552 A0A494C1B8;P29144;Q5VZU9;A0A494C0U1;A0A494C0A3 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 4 0 1 57.788 57.791 3 0.010772 17414 20230619_1883_Aki_TMTPro18x_K_F4 86.086 30.37 28681 27709 31908 29876 29457 35128 31803 31335 45323 18342 17208 14535 14915 14302 27434 17110 17088 12701 26575 25375 32098 30079 30890 35037 32335 31930 44197 19177 18884 14942 15907 14898 27047 16939 16419 12126 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15972000 29369 1552 27589 55196 44543 44543 1 9606 Homo sapiens 0.04792202845419524 VLTGTPLRPGVSIVSGNTVLAAK Unmodified 2249.3107 0.31071646 1347 A0A2R8Y4P3;A0A2R8Y840;Q9HCK8;A0A2R8Y808 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes no 0 0 1 7 0 1 59.344 59.393 3 4.153E-07 17553 20230619_1887_Aki_TMTPro18x_K_F7 86.8 65.342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29370 1347 27590 55197 44544 44544 1 9606 Homo sapiens 0.23603352862937754 VLTGVAGEDAECHAAK Unmodified 1626.7672 0.76716988 3354 O95373;B3KQG6 IPO7 Importin-7 yes no 0 0 0 3.5 0.5 2 2 44.06 44.117 3;4 8.2458E-26 11314 20230619_1883_Aki_TMTPro18x_K_F4 228.51 202.36 316580 237600 301510 278060 262250 316840 341270 305780 345980 441770 365910 399970 522830 411770 292880 628580 594760 563530 292460 217960 306860 278130 277810 317190 339670 316790 353700 437830 381330 408590 517840 435950 320360 623420 565930 536040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 686270000 29371 3354 27591 55198;55199;55200;55201 44545;44546 44546 2 9606 Homo sapiens -0.021143020643648924 VLTIDPTEFK Unmodified 1161.6281 0.62814043 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 7.5 0.5 1 1 62.108 62.14 3 0.00023581 18790 20230619_1887_Aki_TMTPro18x_K_F7 116.52 96.214 147260 122320 129900 130310 113760 132060 157410 160500 180830 169360 150700 149260 186540 144820 150160 162630 145010 177680 136050 112070 133190 131090 120710 134090 156900 162190 181730 170070 157580 152270 187400 150600 153130 163950 139020 168480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 341000000 29372 3647 27592 55202;55203 44547 44547 1 9606 Homo sapiens 0.05379148100405473 VLTLSDDLER Unmodified 1159.6085 0.60846762 406 A0A024R6Q1;P55010;Q6IBU0 EIF5 Eukaryotic translation initiation factor 5 yes no 0 0 0 2 0.816 1 1 1 55.795 55.815 2 1.81E-13 16871 20230619_1881_Aki_TMTPro18x_K_F2 222.22 187.96 109030 100530 100770 113160 103430 127230 119410 116810 138860 117280 128870 132580 125370 115130 134040 138310 141560 160210 100830 92118 103190 113440 107790 127340 120060 120090 139880 119010 132600 133330 128550 120550 136600 139830 135500 151870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 515680000 29373 406 27593 55204;55205;55206 44548 44548 1 9606 Homo sapiens 0.03504772089650032 VLTMPETCR Oxidation (M) 1121.5209 0.52091494 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;A0A7I2V479 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 1 0 4.5 0.5 1 1 39.511 39.577 2 0.0041595 9338 20230619_1885_Aki_TMTPro18x_K_F5 93.374 79.378 39136 33675 39608 41282 43169 46728 46953 45683 52832 44137 45705 45986 50321 43666 46267 49233 50799 52803 36203 30888 40262 41141 44652 46817 47299 46703 53188 44766 47438 46532 51032 45417 47385 49579 48574 50107 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73666000 29374 832 27594 55207;55208 44549 44549 496 1 9606 Homo sapiens -0.03498468377119934 VLTMPETCR Unmodified 1105.526 0.52600031 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;A0A7I2V479 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 6.5 0.5 1 1 46.862 46.948 2 6.9197E-06 12140 20230619_1887_Aki_TMTPro18x_K_F7 180.03 165.25 179510 131730 152730 162860 149330 183570 177840 174780 188030 214030 206370 223640 251550 200020 188280 278310 273200 254330 165680 120910 157420 162190 156350 183810 178000 180210 191890 214450 212920 225850 252290 211270 197740 276790 260450 241880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 217420000 29375 832 27594 55209;55210 44550 44550 1 9606 Homo sapiens -0.02254164514488366 VLTPEEQLADK Unmodified 1241.6503 0.65033243 355 A0A024R5S5;O75822;O75822-3;O75822-2 EIF3S1;EIF3J Eukaryotic translation initiation factor 3 subunit J yes no 0 0 0 2.8 1.17 1 1 1 2 52.386 52.415 2;3 7.1798E-12 15106 20230619_1883_Aki_TMTPro18x_K_F4 229.53 185.72 348320 281630 313380 335220 284640 338360 339930 324250 480360 392010 394370 383190 437650 345410 405010 448470 413680 422750 321790 258310 320970 334220 299950 341600 343800 334130 477740 392540 410460 388250 443600 363110 413140 447450 395790 401770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 929430000 29376 355 27595 55211;55212;55213;55214;55215 44551;44552;44553 44553 3 9606 Homo sapiens 0.039173277781856086 VLTPELYAELR Unmodified 1302.7184 0.71835242 3441 V9HWH2;P12277;V9HW77;A0A0S2Z471;B4DP56;G3V4N7;G3V461 HEL-S-29;CKB;HEL-211 Creatine kinase B-type yes no 0 0 0 5.5 0.5 1 1 60.964 61.018 2 5.0247E-09 18305 20230619_1885_Aki_TMTPro18x_K_F5 188.87 150.1 1389800 1254900 1282800 1421300 864250 1000800 1175100 1228300 1124300 1729600 1761400 1807500 1806500 2401400 947140 2392100 1159500 2046200 1285100 1150000 1306400 1416800 939450 1049700 1166700 1253100 1175800 1723000 1778200 1852500 1806900 2452500 998550 2380700 1113500 1943900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4347400000 29377 3441 27596 55216;55217 44554;44555;44556 44554 3 9606 Homo sapiens 0.07910197428850552 VLTPTQVK Unmodified 884.53312 0.53311783 2861 D9IAI1;P30086;B4DRT4 HEL-S-34;PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 3.5 2.69 1 1 1 1 46.809 46.86 2 1.0681E-06 12945 20230619_1881_Aki_TMTPro18x_K_F2 199.07 80.382 616460 489740 473740 524770 658380 819290 649510 604630 999180 493090 530690 517920 525310 476520 622880 549040 639760 520790 568830 448790 496360 530880 670810 801030 665440 629490 977770 506460 566370 523520 541450 496550 632130 549310 611130 495380 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1605799999.9999998 29378 2861 27597 55218;55219;55220;55221 44557;44558;44559;44560 44558 4 9606 Homo sapiens 0.08623259419891838 VLTSGIFETK Unmodified 1093.6019 0.60192568 1073 A0A0S2Z3H8;A0A7I2V5R6;Q5JWF2;Q5JWF2-2;P63092-4;P63092-3;P63092;P63092-2;Q5JWE9;A0A0S2Z3S5;Q14455;A0A590UJQ9;A0A590UK28;Q5FWY2;A0A804HIH4;B0AZR9;A0A0A0MR13;A0A590UJF0;A0A590UJS2;A0A590UJY2 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short yes no 0 0 0 1.5 0.5 1 1 59.333 59.339 3 3.6307E-07 18362 20230619_1881_Aki_TMTPro18x_K_F2 155.57 125.01 68273 58470 64996 73585 69654 74513 78380 75074 76404 85016 81584 72983 86245 69479 70441 94434 78040 85689 63123 53647 66422 73079 72180 75300 78467 76931 78217 85002 83600 74574 87096 73125 72465 93932 74648 81453 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198350000 29379 1073 27598 55222;55223 44561 44561 1 9606 Homo sapiens 0.05886878928936312 VLTVINQTQK Unmodified 1142.6659 0.66592292 3583 P42766;F2Z388;A0A024R866 RPL35 60S ribosomal protein L35 yes no 0 0 0 3 0.707 1 2 1 53.096 53.138 2;3 2.7385999999999997E-19 15523 20230619_1882_Aki_TMTPro18x_K_F3 255.71 159.21 582110 526200 552440 571600 609570 675590 676920 654970 682600 662280 595120 522880 722340 542870 630200 775890 680120 548880 538380 482020 564700 575130 630380 674960 678720 670610 691970 664780 619880 538480 728410 571760 645960 762870 649340 524210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6665099999.999999 29380 3583 27599 55224;55225;55226;55227 44562;44563;44564 44563 3 9606 Homo sapiens 0.10029659085898857 VLTWDGK Unmodified 817.4334 0.43340378 542 A0A024R8V6;Q9P275;B3KMW2;K7EIH0 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 yes no 0 0 0 8 0 1 54.552 54.619 2 0.067408 15541 20230619_1888_Aki_TMTPro18x_K_F8 77.058 38.82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29381 542 27600 55228 44565 44565 1 9606 Homo sapiens 0.017384418059464224 VLVAQHDVYK Unmodified 1170.6397 0.63970816 1075 P13804;A0A0S2Z3L0;A0A0S2Z3M4;P13804-2;H0YLU7;A0A8I5KVL5;A0A8I5KYH4;A0A8I5KYP7;A0A8I5KUF3;H3BV91;H0YKF0;A0A8I5KT03;A0A8I5KUR2;A0A8I5KVC9 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes no 0 0 0 7.5 0.5 1 1 44.169 44.219 3 6.8694E-05 11182 20230619_1888_Aki_TMTPro18x_K_F8 135.66 98.187 456200 377650 425920 456290 483680 589780 573550 568200 666050 375900 406090 379760 431810 359400 454130 453870 445610 429510 421630 346400 436410 456120 500820 585530 575630 576740 661930 390880 429990 385140 441030 376410 460920 453240 426330 408270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 918670000 29382 1075 27601 55229;55230 44566;44567 44567 2 9606 Homo sapiens 0.061213899144149764 VLVATNVAAR Unmodified 1012.6029 0.60292873 2610 B4DW97;Q9BQ39;B4DED6;Q9NTA9;K0J110 DDX50;DKFZp761E0323;mcdrh ATP-dependent RNA helicase DDX50 yes no 0 0 0 3 0 1 45.051 45.124 2 7.1233E-05 11882 20230619_1882_Aki_TMTPro18x_K_F3 144.5 118.92 108720 84327 101110 103040 108610 127740 108340 110060 131490 104590 111540 113620 124460 103290 107220 128320 134660 129210 100440 77377 103470 102840 112330 126870 109980 113510 131790 106340 115950 114640 125820 108220 110950 128540 128540 122740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39004000 29383 2610 27602 55231 44568 44568 1 9606 Homo sapiens 0.09713138088511641 VLVDMSR Unmodified 818.43202 0.43202358 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 6.5 1.12 1 1 1 1 47.167 47.24 2 0.021789 12666 20230619_1886_Aki_TMTPro18x_K_F6 102.77 60.299 728600 678660 665450 752420 728010 803690 744200 765240 953800 800270 870890 884920 938880 735820 788020 1018600 1024400 945800 673810 621730 682680 754620 752170 808160 755950 785430 956130 809770 900330 889890 948790 778990 818250 1014300 977340 899380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 797400000 29384 3756 27603 55232;55233;55234;55235 44569;44570 44569 2 9606 Homo sapiens 0.015544844455462226 VLVDQTTGLSR Unmodified 1187.651 0.65100113 3938 Q15717;Q15717-2 ELAVL1 ELAV-like protein 1 yes no 0 0 0 7 0.816 1 1 1 47.225 47.298 2 1.1196E-12 12735 20230619_1886_Aki_TMTPro18x_K_F6 215.87 139.81 517410 449630 493960 527890 553270 589640 603200 587810 650830 648730 664370 603560 689990 521130 649070 697770 706210 618900 478450 412230 504850 527600 571180 591660 606760 602220 661020 650940 681780 612310 701040 549860 664120 693840 674540 588990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1135100000 29385 3938 27604 55236;55237;55238 44571;44572 44571 2 9606 Homo sapiens 0.06468167217872178 VLVDSSFGQPTTQGEAR Unmodified 1790.8799 0.87989145 2834 D3DWL9;Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes no 0 0 0 5 0 1 51.157 51.232 3 2.9349000000000002E-30 14286 20230619_1885_Aki_TMTPro18x_K_F5 186.72 172.69 49859 35624 49883 52774 53717 56928 55066 52157 57095 98428 93582 101790 126480 109840 71197 106540 119650 131190 46067 32768 50742 51920 55503 57142 55540 54851 59721 97056 95723 103390 125450 112900 76236 108390 114090 124300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48376000 29386 2834 27605 55239 44573 44573 1 9606 Homo sapiens 0.01608669933307283 VLVEATYNPNMPFK Unmodified 1621.8174 0.81741453 4208 Q8IX12-2;Q8IX12;A0A0C4DGG8;F5H2E6;F5H3E1 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 0 0 0 2 0 1 61.632 61.642 3 0.00090596 19350 20230619_1881_Aki_TMTPro18x_K_F2 82.543 63.468 40053 34096 35085 39465 36177 47456 42436 39594 46693 41558 43182 51761 51419 45280 46886 47103 44491 49805 37008 31258 36109 39515 37731 47187 42548 41060 47182 42224 44896 51834 52007 47006 47627 47464 42629 47257 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32883000 29387 4208 27606 55240 44574 44574 1 9606 Homo sapiens 0.03137852331406066 VLVEDTK Unmodified 802.44363 0.44363412 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 4 0 1 45.937 45.981 2 0.04865 12161 20230619_1883_Aki_TMTPro18x_K_F4 91.9 20.558 153730 101990 150360 163480 195560 185300 163160 172920 227760 194160 237960 254690 253960 193060 228150 174640 259580 246930 141960 93933 153720 160230 198570 185440 168430 178080 228690 196980 244440 253530 257300 200380 233860 180030 247980 233820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72499000 29388 1292 27607 55241 44575 44575 1 9606 Homo sapiens 0.034510047405206024 VLVEGPLNNLR Unmodified 1222.7034 0.70337105 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A8A5YP40;B3KY55 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 1 0 1 56.331 56.331 2 1.9443E-12 16941 20230619_1880_Aki_TMTPro18x_K_F1 213.85 141.71 89698 68644 85701 95068 85818 101120 103300 86290 103870 108860 106910 96977 105740 89907 101080 110200 103530 104250 82877 63073 87466 93875 89634 101420 103130 89842 105940 108460 109440 98775 107730 94055 103050 110060 99042 99080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52506000 29389 462 27608 55242 44576 44576 1 9606 Homo sapiens 0.10092750351509494 VLVEQQQDR Unmodified 1113.5778 0.57783619 4065 Q5TDH0-2;Q5TDH0;Q5TDH0-3;H0YII4;H0YI90 DDI2 Protein DDI1 homolog 2 yes no 0 0 0 2 0 1 38.576 38.642 2 0.00069867 9187 20230619_1881_Aki_TMTPro18x_K_F2 126.55 102.78 42814 29005 36567 40581 51098 55390 47106 44568 59876 44134 49870 51024 51511 48409 42451 44768 65835 60118 39498 26668 37909 40201 51847 54628 48098 46270 59833 44887 51705 51387 52152 49831 44623 45902 62725 56958 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26742000 29390 4065 27609 55243 44577 44577 1 9606 Homo sapiens 0.02559038495292043 VLVFVMGK Oxidation (M) 907.52011 0.5201103 2741 C9J712;P35080 PFN2 Profilin-2 yes no 0 1 0 4 0 1 59.275 59.278 2 0.0038752 18032 20230619_1883_Aki_TMTPro18x_K_F4 114.54 81.162 102180 83734 82717 127200 93736 75747 87993 78541 89771 73969 83217 63770 61453 57741 81560 82849 74059 74472 94335 77002 86027 124100 96159 80618 89110 80077 91037 74715 84648 65110 64402 61062 82181 82379 70934 70821 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77048000 29391 2741 27610 55244 44578 44578 1641 1 9606 Homo sapiens 0.062651050361751 VLVFVMGK Unmodified 891.5252 0.52519568 2741 C9J712;P35080 PFN2 Profilin-2 yes no 0 0 0 6 0 1 63.215 63.263 2 0.0040139 19584 20230619_1886_Aki_TMTPro18x_K_F6 117.7 98.062 488460 475470 500930 579440 279790 446850 407100 374300 446910 430770 337860 344540 433900 350480 407180 393940 379780 452670 452290 435910 505050 574790 312620 460040 404580 389430 448900 429880 356140 353730 438400 363950 412940 398500 364140 429050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 349570000 29392 2741 27610 55245 44579 44579 1 9606 Homo sapiens 0.07509408898783931 VLVIGAGGLGCELLK Unmodified 1497.8589 0.85888542 2301 J3JZZ9;B2RBP3;Q8TBC4;Q8TBC4-2;F8WF86 UBE1C;UBA3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 3 0 1 63.514 63.545 3 2.5568E-06 19930 20230619_1882_Aki_TMTPro18x_K_F3 119.39 92.784 31257 27825 30789 31196 30899 32707 33603 32479 34606 33741 38776 37572 43001 33063 38675 41656 39504 43713 28915 25498 31317 31261 32144 32967 33765 33238 35364 34148 39768 37838 43519 34727 39467 41828 37818 41481 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25231000 29393 2301 27611 55246 44580 44580 1 9606 Homo sapiens 0.12987033090780642 VLVLGDSGVGK Unmodified 1042.6023 0.60226003 2762 C9JXM3;Q5HYI8;H7C533;F8WAX9;F8WF50;F8WDC7 RABL3 Rab-like protein 3 yes no 0 0 0 8 0 2 55.563 55.625 2;3 0.00039165 16003 20230619_1888_Aki_TMTPro18x_K_F8 140.45 19.458 147020 120110 135230 145330 145600 178740 176950 180550 246440 139370 158610 158850 169930 138430 167240 171410 161370 167420 135860 110180 138620 145150 151540 178180 178640 183190 243220 143860 167380 159790 172940 145220 169810 171500 154500 159040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48401000 29394 2762 27612 55247;55248 44581;44582 44582 2 9606 Homo sapiens 0.08266298648823067 VLVLLSGGVDSTVCTALLNR Unmodified 2086.1456 0.14562496 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 5 0 1 65.673 65.717 3 2.6408E-22 20472 20230619_1885_Aki_TMTPro18x_K_F5 173.37 154.3 4083.7 5985.4 4532.3 6250.8 4409.9 5959.6 5670.6 7474.4 8510.7 6679.2 6910 5921.8 6292.6 3960.6 5425.7 6843.8 6536.3 5673.1 3798.2 5473.8 4577.5 6289 4636.4 6082.3 5734.1 7504 8437.8 6769.1 7128.6 5985.4 6393 4307.8 5601.5 6760.8 6237.1 5403.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14210000 29395 1182 27613 55249 44583 44583 1 9606 Homo sapiens 0.1459979773167106 VLVLSQDYGK Unmodified 1120.6128 0.61282471 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;F8W6C1;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 4.5 3.5 1 1 56.31 56.338 3 0.0025147 16962 20230619_1880_Aki_TMTPro18x_K_F1 81.263 57.944 260800 214100 223550 248750 233920 285860 274520 294290 343290 317130 287280 284620 332960 260950 273110 353660 300690 315200 240870 196320 230550 248900 243650 286390 276550 300540 343660 318340 299310 289710 335420 274940 280750 351510 287530 299740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 528650000 29396 2337;3778;3779 27614 55250;55251 44584;44585;44586 44584 3 9606 Homo sapiens 0.05734281303239186 VLVMANDPNYLHR Unmodified 1540.782 0.78203208 2118 A8K8B0;P30154;P30154-2;P30154-4;P30154-3;B7Z1G3;P30154-5 PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 1 0 1 50.017 50.017 3 2.5958E-21 14379 20230619_1880_Aki_TMTPro18x_K_F1 223.31 181.23 19010 16997 22194 20917 18227 24926 25129 25854 27656 22941 26264 23863 23164 23558 27451 25461 27704 26846 17613 15589 22223 20863 19459 24907 25021 26264 27948 23378 26872 24190 23972 24397 27841 25642 26498 25487 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72939000 29397 2118 27615 55252 44587 44587 1 9606 Homo sapiens 0.03327234594280526 VLVNVLTSDQTEDVLEAVAAK Unmodified 2213.1791 0.17909316 2458 B4DLL7;B4DE48;B4DQ37;B4DTB8;Q15036-2;Q15036 SNX17 Sorting nexin-17 yes no 0 0 0 7 0 1 65.642 65.667 3 1.1164E-05 20382 20230619_1887_Aki_TMTPro18x_K_F7 94.057 85.457 11062 10146 11216 11072 12832 16916 12122 12793 15597 15736 16445 14901 13202 11766 16808 15726 12802 13334 10237 9294.3 11407 11183 13209 16563 12375 13425 15728 15723 16686 15063 13746 12444 16802 15611 12292 12688 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70681000 29398 2458 27616 55253 44588 44588 1 9606 Homo sapiens 0.12103077984511401 VLVPATDR Unmodified 869.49707 0.49706667 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;A0A7I2V3I2;H0YBP5;A0A7I2V4G3;E5RGA2;A0A7I2V5P9 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 0 5.5 1.12 1 1 1 1 42.376 42.45 2 0.0021524 10495 20230619_1885_Aki_TMTPro18x_K_F5 131.27 55.295 342410 266020 333590 341890 395090 396030 415080 397520 492020 440490 460660 444480 470760 395920 428840 510810 508090 451010 316450 244220 340570 339770 405820 396480 419640 407130 495550 443110 474440 449600 478220 416010 441620 507910 484970 429220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 937110000 29399 1659 27617 55254;55255;55256;55257 44589 44589 1 9606 Homo sapiens 0.0570980224304094 VLVPGIPGHHAAIK Unmodified 1407.8351 0.83505393 3916 Q15061 WDR43 WD repeat-containing protein 43 yes yes 0 0 0 4 0 1 45.394 45.438 4 0.00044234 11945 20230619_1883_Aki_TMTPro18x_K_F4 92.925 67.539 63884 48794 59927 60050 54697 71282 58929 61277 91810 76325 67600 78121 93378 66802 56955 126420 104860 101480 59017 44778 61134 59868 57504 70974 60189 63684 90710 76436 71641 78919 92745 72451 61585 124450 99845 96665 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45593000 29400 3916 27618 55258 44590 44590 1 9606 Homo sapiens 0.14744980439286337 VLVQNAAGSQEK Unmodified 1242.6568 0.65681479 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 6.5 0.5 1 1 43.712 43.797 3 0.0016807 10827 20230619_1887_Aki_TMTPro18x_K_F7 81.002 56.148 181750 88447 151180 166870 201830 169330 189260 194850 231980 222080 233300 261480 264650 213130 186880 243160 227540 225430 167400 81787 156900 162010 205010 171640 192860 198010 234030 224150 240760 261910 265330 223010 193950 242750 217300 214310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265290000 29401 1292 27619 55259;55260 44591 44591 1 9606 Homo sapiens 0.04519265729572908 VLVSGLPPSGSWQDLK Unmodified 1681.9039 0.90392136 3844 Q13242;A8K3M9 SRSF9 Serine/arginine-rich splicing factor 9 yes no 0 0 0 2.5 0.5 1 1 62.37 62.389 3 3.6857E-08 19389 20230619_1882_Aki_TMTPro18x_K_F3 129.38 102.84 316930 277360 321570 325880 277690 329670 326480 341980 360020 379840 366090 377830 391100 330550 385140 419510 381710 428140 293220 254290 325660 325290 293390 333360 327570 349500 365300 381700 376580 382060 398050 347280 391760 420520 365570 406390 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 230740000 29402 3844 27620 55261;55262 44592;44593;44594;44595;44596 44595 5 9606 Homo sapiens 0.09024555157634495 VLVSPTNPPGATSSCQK Unmodified 1741.8669 0.86688392 3285 O60763;O60763-2 USO1 General vesicular transport factor p115 yes no 0 0 0 2.5 0.5 1 1 47.899 47.974 3 1.7509E-06 13435 20230619_1881_Aki_TMTPro18x_K_F2 111.43 97.392 104480 95990 112160 117860 125770 127600 135940 128870 140100 132560 135430 126190 149770 112860 141200 145610 144610 127250 96745 88028 113530 117370 129700 128350 136590 131680 142320 133580 139760 128010 151890 118640 143930 144770 138210 121120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 258870000 29403 3285 27621 55263;55264 44597 44597 1 9606 Homo sapiens 0.02562515549584532 VLVTGAGK Unmodified 743.45414 0.45413923 1484 A0A384NY14;Q7Z4W1;J3KS22;J3QS36;J3KRZ4 DCXR L-xylulose reductase yes no 0 0 0 1.5 0.5 1 1 45.407 45.448 2 0.0049663 12332 20230619_1881_Aki_TMTPro18x_K_F2 124.08 46.405 306480 199440 295820 328940 364060 422240 371990 405220 474460 323930 494790 467070 389930 356040 441240 274800 466970 499620 282950 183780 302680 322550 373300 419190 377820 412880 477460 336290 501970 463860 403860 366790 448270 290580 446770 472040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141140000 29404 1484 27622 55265;55266 44598 44598 1 9606 Homo sapiens 0.07215032185615655 VLVTGATGLLGR Unmodified 1155.6976 0.69755739 1191 A0A8Q3WK80;A0A8Q3WK74;Q9NZL9-4;Q9NZL9-2;Q9NZL9;A0A140VJP2;A8K7A4;A0A8Q3WK84;Q9NZL9-3;A0A8Q3WLC0;A0A8Q3SIE5;A0A8Q3WKR9;E5RJR3;A0A8Q3WLP1;Q9NZL9-5 MAT2B Methionine adenosyltransferase 2 subunit beta yes no 0 0 0 5.5 0.5 1 1 58.177 58.24 2 8.3971E-10 17176 20230619_1885_Aki_TMTPro18x_K_F5 218.93 151.42 234430 203710 219510 231550 267580 314240 237970 230110 275000 273110 262050 251280 284550 239440 263660 302010 287490 309970 216740 186710 225020 232600 273580 309560 242830 242020 277720 273170 270410 255770 288710 250760 270010 302800 274990 294240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 353640000 29405 1191 27623 55267;55268 44599;44600 44599 2 9606 Homo sapiens 0.12593651839847553 VLVTTNVCAR Unmodified 1131.607 0.60702783 3102 Q9NUU7;I3L0H8;Q9UMR2;Q9UMR2-4;Q9UMR2-2;A0A0U4B4U6;F6QDS0;H3BQK0;Q53G16;Q7Z4W5;Q9HBZ9;Q2NL95;B4DS24;Q69YM2;I3L352;Q68DY7;B4DL69;A0A024QZ90;Q59FQ9;Q9UMR2-3;Q9NUU7-2 DDX19A;DDX19B;DKFZp762C1313;DKFZp686C21137;hCG_1998531 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B yes no 0 0 0 3 0 1 44.846 44.919 2 2.0899E-06 11799 20230619_1882_Aki_TMTPro18x_K_F3 199.68 173.74 86394 66210 69320 78025 76602 91855 88586 84098 99569 84649 82959 82770 86526 69107 70738 89146 96887 95695 79724 60734 72016 78007 79420 91644 88933 86473 100120 85492 86039 83660 87452 72836 73752 89566 92440 90827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133900000 29406 3102 27624 55269 44601 44601 1 9606 Homo sapiens 0.046488595198979965 VLVVHDGFEGLAK Unmodified 1382.7558 0.75580056 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162;Q7KYX9;A0A0S2Z4A8;F8VP00;P78457 PFKM ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 6.5 0.5 1 1 54.779 54.85 3 3.0819E-08 15705 20230619_1887_Aki_TMTPro18x_K_F7 162.31 133.5 479050 432400 492540 504040 418310 468250 429560 451710 487990 540170 578000 645690 581590 520620 656000 635020 737060 778590 443360 396360 498080 502810 440760 475970 434730 465140 497690 544210 589650 646290 597270 547270 670110 644350 704720 737830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 482530000 29407 116 27625 55270;55271 44602 44602 1 9606 Homo sapiens 0.07973288694461189 VLVVSAK Unmodified 714.46398 0.46397563 4509 Q9H3K6;H3BTW0;A0A499FJE1;H3BVE0;Q9H3K6-2;A0A0B4J295 BOLA2 BolA-like protein 2 yes no 0 0 0 2.5 0.5 1 1 48.785 48.856 2 0.012826 13626 20230619_1882_Aki_TMTPro18x_K_F3 121.29 41.839 362360 272100 311950 349680 379170 356880 358740 360850 446630 423540 472030 452560 458700 376350 354460 448860 484460 469940 334510 249830 322220 346830 387760 360600 365640 370080 451000 425590 482200 455590 463620 394650 369960 450810 462170 446180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 705470000 29408 4509 27626 55272;55273 44603 44603 1 9606 Homo sapiens 0.09532220190988028 VLVWHTR Unmodified 909.51847 0.51847082 3330 O94766;Q5U676;A8K1V3;Q29RV3;A0A087WXU9;Q9NPZ5 B3GAT3;B3GAT2 Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3;Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 yes no 0 0 0 4.5 0.5 1 1 43.141 43.204 3 0.0010496 10867 20230619_1885_Aki_TMTPro18x_K_F5 153.15 118.04 120110 96335 119690 130440 125000 141710 137020 137260 161770 144250 159750 172290 156080 135580 155620 157330 168090 176010 111040 88478 121770 129050 129790 142300 138230 140740 163260 146280 163940 172350 159420 142210 158960 158800 160760 166940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 83014000 29409 3330 27627 55274;55275 44604;44605 44605 2 9606 Homo sapiens 0.06009232062410774 VLVYELLLGK Unmodified 1145.706 0.70599682 2309 B2RD09;Q96P11-2;Q96P11;Q96P11-4 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes no 0 0 0 4 0 1 65.799 65.811 3 0.018224 20725 20230619_1883_Aki_TMTPro18x_K_F4 65.305 41.877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29410 2309 27628 55276 44606 44606 1 9606 Homo sapiens 0.13897205756484254 VLVYGGR Unmodified 762.43882 0.43882351 1243 A0A140VKA9;P09417;P09417-2;B7Z415;D6RGG7;D6RHJ7 QDPR Dihydropteridine reductase yes no 0 0 0 2.5 0.5 1 1 43.641 43.717 2 0.019815 11233 20230619_1882_Aki_TMTPro18x_K_F3 105.42 76.89 199790 156890 184530 219890 202700 208040 209200 202410 227590 234880 262050 252600 263280 214740 238850 276450 294860 253510 184570 144160 189180 216630 209190 211150 211160 208140 232230 236150 267230 254450 267480 226020 246590 275440 281290 241180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 381910000 29411 1243 27629 55277;55278 44607 44607 1 9606 Homo sapiens 0.048101653884259576 VLYAYGYYTGEPSK Unmodified 1609.7664 0.76642482 549 Q53GB9;A0A024R8Z1;Q5VV89;O14880 MGST3 Microsomal glutathione S-transferase 3 yes no 0 0 0 1.67 0.471 1 2 59.499 59.507 2;3 8.5758E-09 18413 20230619_1881_Aki_TMTPro18x_K_F2 156.69 138.23 94287 66173 88744 116490 101460 134540 132560 129320 162880 124130 122620 150360 156290 144240 95918 166320 168620 174090 87064 61010 91032 113620 105440 134400 132700 132360 162510 126620 129290 151230 155760 150100 103000 167000 160660 165250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 286320000 29412 549 27630 55279;55280;55281 44608;44609;44610 44609 3 9606 Homo sapiens -0.014067734417949396 VLYAYGYYTGEPSKR Unmodified 1765.8675 0.86753585 549 Q53GB9;A0A024R8Z1;Q5VV89;O14880 MGST3 Microsomal glutathione S-transferase 3 yes no 0 0 1 4 0 1 52.979 52.998 3 3.5579999999999997E-19 15316 20230619_1883_Aki_TMTPro18x_K_F4 212.55 187.86 112690 95924 133880 151940 170550 170760 196820 170710 174540 157440 163190 179270 187230 144460 198620 138680 140850 146480 104390 88246 134930 148990 174630 171200 196130 174130 178610 160480 169230 179690 190680 149920 198250 140120 135360 139030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231050000 29413 549 27631 55282 44611 44611 1 9606 Homo sapiens 0.015236782609008515 VLYCGVCSLPTEYCEYMPDVAK Unmodified 2653.1573 0.15725356 689 F8VVL1;A0A024RBR3;O43583 DENR Density-regulated protein yes no 0 0 0 7.5 0.5 1 1 63.385 63.413 4 8.0972E-05 19256 20230619_1888_Aki_TMTPro18x_K_F8 78.021 75.409 44207 37326 48529 49105 45372 47362 50223 49587 54754 55714 44634 57337 68125 52132 53193 60735 65403 68875 40918 34265 48890 48605 47473 48082 50508 50678 55187 56022 47385 57909 68051 54446 55065 61326 62483 65318 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115620000 29414 689 27632 55283;55284 44612 44612 1 9606 Homo sapiens -0.10319877413849099 VLYDFVMDDTISPYSR Unmodified 1919.8975 0.89751535 256 A0A024R3P1;O15121 DEGS1 Sphingolipid delta(4)-desaturase DES1 yes no 0 0 0 6 0 1 64.905 64.949 3 2.9943E-08 20297 20230619_1886_Aki_TMTPro18x_K_F6 132.44 121.39 17225 13976 14872 15750 15698 16707 18833 18313 18767 19371 21132 23192 23449 23390 24771 20731 25672 27420 15909 12812 15323 15780 16320 16864 18805 18628 19221 19636 21695 23368 23945 23974 25192 21266 24566 25967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25117000 29415 256 27633 55285 44613 44613 1 9606 Homo sapiens -0.02563750856029401 VLYLLSQLQQSQMAEK Unmodified 1877.9921 0.99208444 3350 Q59HG1;O95239;O95239-2;B3KNC0 KIF4A Kinesin-like protein;Chromosome-associated kinesin KIF4A yes no 0 0 0 5 0 1 65.472 65.516 3 9.8274E-09 20380 20230619_1885_Aki_TMTPro18x_K_F5 141.34 127.6 16566 13675 16803 17554 15233 19079 15282 17397 16549 18943 18827 17121 20047 17141 17464 16945 21935 20707 15321 12551 17030 17428 15967 19132 15462 17925 16895 19004 19250 17464 20302 17681 18046 17245 20935 19633 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22580000 29416 3350 27634 55286 44614 44614 1 9606 Homo sapiens 0.08820807685970067 VLYLPSFFTYAK Unmodified 1447.7751 0.77513901 735 A8YXX5;Q9NZJ7;Q9NZJ7-2;A0A024RCX4;A0A8Q3WLQ4;A0A8Q3WKF6;A0A024RD08;A0A8Q3WKA3;A4FVA6;A0A8Q3SHP9;A0A8Q3WLF0;H0Y8C3;Q8IW90;A0A8Q3SHR5;A0A8Q3WKU8;A0A8Q3WKC8;Q9Y374;A0A8Q3WKA4;A0A8Q3WKA5;A0A8Q3WLQ9;A0A8Q3SHP5;A0A8Q3WKC1;A0A8Q3SHK9;A0A8Q3SHJ3 PIG60;MTCH1 Mitochondrial carrier homolog 1 yes no 0 0 0 7.5 0.5 1 1 65.238 65.261 3 0.017967 20224 20230619_1887_Aki_TMTPro18x_K_F7 61.235 49.089 34618 23303 28889 36062 29782 39142 38204 37042 43530 23869 27255 27885 28415 22410 32315 33148 31232 25432 31931 21452 29892 35384 31157 39260 38176 37649 43320 24985 28801 27973 29147 23855 32734 32707 29853 24258 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52616000 29417 735 27635 55287;55288 44615 44615 1 9606 Homo sapiens 0.06916244985382036 VLYLSAFTSK Unmodified 1127.6227 0.62266112 2185 Q59GA0;E9PIM6;B0YJA4;E9PNQ8;P04216;J3QRJ3 THY1 Thy-1 membrane glycoprotein yes no 0 0 0 5.5 0.5 2 2 62.476 62.525 2;3 3.39E-06 19253 20230619_1886_Aki_TMTPro18x_K_F6 169.09 116.6 430080 362210 465850 456970 325230 453740 451590 483680 604830 543130 548910 550630 588210 477520 549030 637840 640340 619280 398030 332360 468190 453800 353230 459500 452970 493580 605040 546040 567530 556350 597210 503560 564490 637070 611640 588470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2854300000 29418 2185 27636 55289;55290;55291;55292 44616;44617 44617 2 9606 Homo sapiens 0.06395469308586144 VLYLVQGEK Unmodified 1047.5964 0.59644637 1123 A0A0S2Z5B8;A0A0S2Z5D4;Q9UJW0;Q9UJW0-3;A0A0S2Z5D5;E5RI97;B4DL03 DCTN4 Dynactin subunit 4 yes no 0 0 0 2 0 1 58.475 58.488 3 0.00069138 18001 20230619_1881_Aki_TMTPro18x_K_F2 89.698 63.025 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29419 1123 27637 55293 44618 44618 1 9606 Homo sapiens 0.07455200137133033 VLYPNDNFFEGK Unmodified 1441.6878 0.68778057 3432;1055;2254 B4DRW6;B2RB32;A0A0M4FEM1;P11217;P11217-2;Q59GM9;P11216;B4DSD8;E9PK47;B2R825;P06737-2;P06737 PYGM;PYGB;PYGL Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, muscle form;Glycogen phosphorylase, brain form;Glycogen phosphorylase, liver form no no 0 0 0 7.5 0.5 1 1 61.491 61.524 3 0.0016412 18466 20230619_1887_Aki_TMTPro18x_K_F7 81.431 68.295 548270 516590 659740 721020 550020 679620 653040 701410 703670 902030 984770 926170 889310 947040 829680 1066600 889250 1135900 508310 474350 659720 710650 582980 690580 654700 720410 725740 901310 992520 940270 908990 981820 849470 1073100 851960 1077200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 875930000 29420 1055;3432;2254 27638 55294;55295 44619 44619 1 9606 Homo sapiens -0.015395809562278373 VLYQVEGFVDK Unmodified 1295.6762 0.67615325 2174 E9PDF6;B0I1S9;O43795-2;O43795;A0A0U1RRI3 MYO1B Unconventional myosin-Ib yes no 0 0 0 6.5 0.5 1 1 62.606 62.649 3 0.00010505 18997 20230619_1887_Aki_TMTPro18x_K_F7 119.39 96.912 185070 151510 170370 196050 179880 212580 200310 197810 211850 219450 211040 206160 240040 194970 206480 246780 222100 227940 171020 139070 174610 194500 186760 213320 201150 203690 215270 220220 217800 209590 242410 204260 211640 245990 212390 216670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 776270000 29421 2174 27639 55296;55297 44620 44620 1 9606 Homo sapiens 0.04014222020464331 VLYRPDGQHDGK Unmodified 1383.6895 0.6895119 120 A0A024R104;Q12860-2;Q12860 CNTN1 Contactin-1 yes no 0 0 1 6.5 0.5 1 1 37.014 37.081 4 6.4313E-10 8084 20230619_1887_Aki_TMTPro18x_K_F7 162.72 130.16 201730 183650 220180 188980 89256 76985 101570 101270 101190 194970 293730 289880 227560 242790 231470 251980 317570 276070 186800 168150 219840 189190 103190 87163 102170 104560 110860 194690 289360 288400 234870 252200 240150 254400 302730 262110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171540000 29422 120 27640 55298;55299 44621;44622 44622 2 9606 Homo sapiens 0.013014728524012753 VLYVQDSLEGEAR Unmodified 1477.7413 0.7412727 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 3 0 1 54.744 54.79 2 0.00013227 16306 20230619_1882_Aki_TMTPro18x_K_F3 138.99 113.33 46421 42339 44813 50600 50403 60585 57510 53171 62927 58847 60030 56670 66557 55546 64190 62755 64039 65496 42942 38818 45789 50545 52142 60328 57724 54991 63686 59126 62003 57608 67599 57732 65297 63110 61284 62174 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42942000 29423 3598 27641 55300 44623 44623 1 9606 Homo sapiens 0.02151171755690484 VLYVYDMLAGK Unmodified 1270.6631 0.66314572 2289 B2RAX6;Q9Y5J1;J3KSR7 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 0 0 0 3 0 1 65.081 65.114 3 0.0016862 20595 20230619_1882_Aki_TMTPro18x_K_F3 84.17 59.315 19309 20039 16065 20139 18694 21381 20388 18416 20287 23586 21984 23118 26281 21848 24238 26238 24649 27974 17860 18336 16655 20349 19264 21470 20451 19165 20766 23544 22676 23444 26584 22818 24718 26388 23603 26540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42668000 29424 2289 27642 55301 44624 44624 1 9606 Homo sapiens 0.03864067636732216 VMAGALEGDLFIGPK Unmodified 1516.796 0.79595081 3577 P42025;Q13841 ACTR1B Beta-centractin yes no 0 0 0 8 0 1 63.193 63.216 3 3.2186E-08 19201 20230619_1888_Aki_TMTPro18x_K_F8 112.51 0 39168 31965 41465 48531 35485 45860 49707 47712 44271 50004 51937 60468 59310 55344 55815 58195 58184 66518 36235 29395 41899 47590 37732 46582 49136 48700 45739 50713 53323 60714 60161 57392 56964 58899 55705 63061 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215480000 29425 3577 27643 55302 44625 44625 1 9606 Homo sapiens 0.058224673027098106 VMALELGPHK Oxidation (M) 1109.5903 0.59031513 1484 A0A384NY14;Q7Z4W1;J3KS22;J3QS36;J3QS45;J3KSZ5;J3QL34 DCXR L-xylulose reductase yes no 0 1 0 7.5 0.5 1 1 46.699 46.767 3 0.00030358 12162 20230619_1888_Aki_TMTPro18x_K_F8 107.83 86.602 116210 95906 101650 123290 117770 115910 140910 129880 147300 108460 123710 109710 95051 92073 148640 109500 121380 124850 107350 88026 104850 122150 121570 118120 140870 131210 148580 110840 126800 110790 100530 96458 148490 110740 116420 118400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215940000 29426 1484 27644 55303;55304 44626 44626 988 1 9606 Homo sapiens 0.03990358633973301 VMATTGGTNLR Oxidation (M) 1135.5656 0.56555694 2256 P26196;B2R858 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 1 0 7.5 0.5 1 1 35.537 35.567 2 0.00071893 7524 20230619_1887_Aki_TMTPro18x_K_F7 105.52 77.349 43985 27693 43874 49408 47795 56359 49551 47046 69744 56111 72222 70549 67355 59630 54888 58151 78183 67752 40612 25550 44675 48154 49446 56208 50479 48969 69933 56705 73730 70588 68340 61785 57330 58998 74507 64288 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51983000 29427 2256 27645 55305;55306 44627;44628 44627 1402 2 9606 Homo sapiens 0.003196787605929785 VMATTGGTNLR Unmodified 1119.5706 0.57064232 2256 P26196;B2R858 DDX6 Probable ATP-dependent RNA helicase DDX6 yes no 0 0 0 8 0 1 40.275 40.264 2 0.0010281 9586 20230619_1888_Aki_TMTPro18x_K_F8 106.2 82.642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29428 2256 27645 55307 44629 44629 1 9606 Homo sapiens 0.015639826232018095 VMCIEHEIK Unmodified 1157.5573 0.55730044 1598 P42224;P42224-2;A0A669KB53;A0A669KBA4;A0A669KB56;A0A669KB68;A0A8V8TN81;A0A669KBI6;J3KPM9;A0A669KB52;A0A669KB75;A0A669KB17;A0A8V8TLI6;D2KFR9;A5D905 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription yes no 0 0 0 5 0 1 47.723 47.799 3 0.0007758 12825 20230619_1885_Aki_TMTPro18x_K_F5 93.111 56.264 66973 51894 61685 68048 72022 68194 65017 72308 79478 63504 75449 72990 76512 72174 71555 87386 81911 92409 61868 47651 63272 67394 73750 69064 66439 73345 79942 64969 77630 73714 77881 75252 73513 87801 78344 87679 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105790000 29429 1598 27646 55308 44630 44630 1 9606 Homo sapiens -0.01517591480410374 VMDEVEK Oxidation (M) 864.38988 0.38988399 4715 Q9Y383;B3KSL5;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2;B3KRR1 LUC7L2 Putative RNA-binding protein Luc7-like 2 yes no 0 1 0 2 0 1 39.932 40.002 2 0.051418 9813 20230619_1881_Aki_TMTPro18x_K_F2 78.324 42.69 75838 46608 85151 89163 109200 121440 99022 105880 107000 84329 119330 136700 111190 105550 104250 75198 125910 140900 70088 43051 86114 86884 111230 119900 100720 108650 108940 87997 121610 135230 113490 108310 107160 79835 120360 133080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59387000 29430 4715 27647 55309 44631 44631 2878 1 9606 Homo sapiens -0.04773535753486158 VMEAFEQAER Unmodified 1208.5496 0.54957253 96 Q59EI3;B2R8A9;A0A024R0K3;Q6ZSA3;F5H5P2;P12694;P12694-2;Q9UMB3 BCKDHA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial yes no 0 0 0 3 0 1 53.839 53.892 2 0.027532 15883 20230619_1882_Aki_TMTPro18x_K_F3 71.524 60.034 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29431 96 27648 55310 44632 44632 1 9606 Homo sapiens -0.04636027476340132 VMEGTVAAQDEFYR Unmodified 1614.7348 0.73480712 2025 B5BU52;B2R6Q4;A8K3B6;P41240;B4DMZ0;B4DP99;Q53EL3 CSK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase CSK yes no 0 0 0 3.5 0.5 1 1 53.278 53.314 3 0.030056 15641 20230619_1882_Aki_TMTPro18x_K_F3 34.851 28.192 157430 150730 168350 162580 179880 209790 182790 180390 241660 179300 169000 166570 182390 147270 180430 188220 201710 178990 145810 138040 170260 163900 186160 207900 185920 186250 239830 181040 177400 169060 185640 154760 184710 187960 192630 170190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79019000 29432 2025 27649 55311;55312 44633 44633 1 9606 Homo sapiens -0.047970894673653675 VMEHFIK Unmodified 902.46841 0.46840908 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 5.5 2.69 1 1 1 1 47.794 47.851 3 0.0036238 13447 20230619_1880_Aki_TMTPro18x_K_F1 114.78 59.342 508840 396340 444840 465780 492200 560350 571910 552180 657400 630320 635080 634940 752650 582970 675470 779520 704150 697040 469880 363530 458140 466030 509990 559270 574540 566690 664110 633070 657830 642920 760390 613610 690370 775280 673400 662950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2080599999.9999998 29433 3429 27650 55313;55314;55315;55316 44634;44635;44636 44634 3 9606 Homo sapiens 0.013273613422484232 VMEHFIK Oxidation (M) 918.46332 0.4633237 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 1 0 7.25 0.829 1 1 2 41.42 41.474 3 0.012994 9835 20230619_1887_Aki_TMTPro18x_K_F7 81.784 34.717 326440 240930 249910 285690 410870 344410 378400 358910 459990 375310 442750 441300 413510 337360 432240 531140 427600 452560 301080 221050 262780 285650 412590 344460 385700 366100 463020 380520 453840 441860 423760 361540 439530 525920 409340 430590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 469850000 29434 3429 27650 55317;55318;55319;55320 44637;44638 44637 2052 2 9606 Homo sapiens 0.000830574796395922 VMEIVDADEK Unmodified 1147.5431 0.54309017 4746 Q9Y5B9;Q0VGA3 SUPT16H FACT complex subunit SPT16 yes no 0 0 0 2.5 0.5 1 1 55.972 56.001 3 0.00055052 16978 20230619_1881_Aki_TMTPro18x_K_F2 99.34 79.554 257260 225530 261830 263020 201810 197870 231300 251370 211490 460780 439630 422790 570070 365810 632690 448090 504950 601680 238030 206760 264630 261850 214860 206460 231320 258650 226810 452720 446230 428840 579530 384500 634180 458070 485030 569500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 391530000 29435 4746 27651 55321;55322 44639;44640;44641 44639 3 9606 Homo sapiens -0.024779654277153895 VMEMFQPSAVVLQCGSDSLSGDR Unmodified 2512.1396 0.13962966 2659 Q6IT96;B5BU61;Q13547;B4DRG0;Q5HYD4 HDAC1;DKFZp686H12203 Histone deacetylase;Histone deacetylase 1 yes no 0 0 0 7 0 1 63.721 63.753 3 3.4011E-26 19541 20230619_1887_Aki_TMTPro18x_K_F7 181.88 159.75 39383 31639 34942 36589 26647 39497 36737 34748 39489 38465 38889 38768 40122 34600 40669 40873 40176 39839 36378 29011 35762 36588 28695 39591 36550 35939 40046 38691 39992 39203 40937 36157 41319 40919 38443 37852 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 151560000 29436 2659 27652 55323 44642 44642 1 9606 Homo sapiens -0.055954566244963644 VMEMYQPSAVVLQCGADSLSGDR 2 Oxidation (M) 2544.1295 0.12945891 4305 Q92769;Q92769-3;B3KUJ5 HDAC2 Histone deacetylase 2;Histone deacetylase yes no 0 2 0 4.5 0.5 1 1 56.994 57.028 3 2.4282E-05 16695 20230619_1885_Aki_TMTPro18x_K_F5 82.885 68.478 15599 12460 13781 16664 12582 17825 10662 13737 17094 16628 15536 14869 17729 11644 11806 20720 21033 19397 14408 11443 14149 16488 13164 17831 11075 14389 16998 16600 16094 15077 17732 12614 12667 20570 20024 18443 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54281000 29437 4305 27653 55324;55325 44643 44643 2720;2721 1 9606 Homo sapiens -0.08084064349759501 VMEMYQPSAVVLQCGADSLSGDR Oxidation (M) 2528.1345 0.13454429 4305 Q92769;Q92769-3;B3KUJ5 HDAC2 Histone deacetylase 2;Histone deacetylase yes no 0 1 0 6.5 0.5 1 1 61.038 61.087 3 1.2589E-26 18574 20230619_1886_Aki_TMTPro18x_K_F6 188.32 166.2 40356 33087 39276 38845 40522 35893 36284 43251 43196 44927 49648 47639 55193 35936 51715 46545 55034 45427 37308 30341 39984 38742 41821 36720 37087 43705 43894 45371 50867 47851 55910 38064 52796 46560 52557 43194 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268930000 29438 4305 27653 55326;55327 44644 44644 2720;2721 1 9606 Homo sapiens -0.06839760487082458 VMEMYQPSAVVLQCGADSLSGDR Unmodified 2512.1396 0.13962966 4305 Q92769;Q92769-3;B3KUJ5 HDAC2 Histone deacetylase 2;Histone deacetylase yes no 0 0 0 6.5 0.5 1 1 62.576 62.62 3 2.5092E-35 19285 20230619_1886_Aki_TMTPro18x_K_F6 217.17 187.33 105650 92763 97345 102880 73296 73425 112200 99013 104610 120510 127780 124140 140190 110490 97669 121680 113370 148690 97669 85000 99251 102750 78988 77140 110650 100040 107960 120690 130490 125390 140590 115110 101080 123530 108570 140810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 957810000 29439 4305 27653 55328;55329 44645;44646 44645 2 9606 Homo sapiens -0.055954566244963644 VMEPLTASR Oxidation (M) 1018.5117 0.51173046 973 A0A0A6YYI3;A0A0B4J1V8;Q9NQ55-2;Q9NQ55;Q9NQ55-3 PPAN-P2RY11;PPAN Suppressor of SWI4 1 homolog yes no 0 1 0 4.5 0.5 1 1 38.484 38.552 2 0.07125 8965 20230619_1883_Aki_TMTPro18x_K_F4 60.074 47.447 69306 55220 70186 71407 82547 88473 74137 83830 92613 83153 97873 97123 102890 84691 88397 99827 99346 97857 64082 50692 71408 71006 84544 88058 75853 85907 93494 84514 100370 97580 104140 88569 90809 99938 94938 92972 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49421000 29440 973 27654 55330;55331 44647 44647 544 1 9606 Homo sapiens 0.0032150632888487962 VMEYINR Unmodified 923.45349 0.4534873 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;J3KRF5 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 7.5 0.5 1 1 48.015 48.088 2 0.011832 12706 20230619_1888_Aki_TMTPro18x_K_F8 116.11 71.504 504140 387740 442760 502640 475850 551270 555600 517800 625360 661980 647630 640210 740190 558790 553310 715610 730790 656950 465520 356010 455810 498700 494170 552910 557630 535230 634380 660610 667220 648190 743280 587670 576580 712860 696990 624870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 679630000 29441 826 27655 55332;55333 44648;44649 44649 2 9606 Homo sapiens -0.011301305257461536 VMFSSFGQIEECR Unmodified 1588.7014 0.7013985 3017 Q92879-3;Q92879-2;Q92879-5;G5EA30;Q92879;Q92879-4;Q92879-6 CELF1 CUGBP Elav-like family member 1 yes no 0 0 0 6.5 0.5 1 1 60.359 60.41 3 1.0287E-11 17973 20230619_1887_Aki_TMTPro18x_K_F7 191.48 154.63 72689 54848 69031 70994 58531 69830 76837 68530 82822 75765 68548 69610 77799 58433 80881 78537 77317 85402 67152 50362 70293 70358 62163 70656 76584 70329 83469 76008 71444 70565 79206 61767 81982 78984 74067 81013 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 93293000 29442 3017 27656 55334;55335 44650;44651 44651 2 9606 Homo sapiens -0.0694041451092744 VMGALNTVVENLHDPDK Oxidation (M) 1866.9146 0.9145624 1285 A0A1K0FUB6;Q8WWM9;K7EMC7;K7EIM9 CYGB Cytoglobin yes no 0 1 0 6 0 1 57.318 57.39 4 0.0026021 17049 20230619_1886_Aki_TMTPro18x_K_F6 71.601 54.359 34703 27650 32069 31836 24776 31086 37886 30981 37400 42511 34191 33720 51113 34142 33832 53572 41401 44587 32064 25354 32694 31811 26687 31490 37411 31984 38051 42076 35958 34670 50752 36272 35235 52954 39561 42433 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14195000 29443 1285 27657 55336 44652 44652 812 1 9606 Homo sapiens 0.015781697497914138 VMHCLDK Oxidation (M) 917.40991 0.40990792 283 Q53S54;A0A024R475;Q13618-2;Q13618;B7Z600;Q13618-3 CUL3 Cullin-3 yes no 0 1 0 6 0 1 34.976 35.03 3 0.032925 7644 20230619_1886_Aki_TMTPro18x_K_F6 63.486 43.157 26980 17077 27008 26862 32428 34732 30179 29218 40525 24941 35429 39328 38315 31382 32144 30232 40492 37052 24913 15729 27512 26412 33203 34384 30874 30125 40435 25907 36735 38995 38720 32576 33241 30793 38638 35132 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7924600 29444 283 27658 55337 44653 44653 173 1 9606 Homo sapiens -0.052100632945212055 VMLESFIDTQK Oxidation (M) 1325.6537 0.65370325 2702 B7Z8Z6;P49736;B3KXZ4;H0Y8E6;Q9BWF4 MCM2 DNA helicase;DNA replication licensing factor MCM2 yes no 0 1 0 7 0 1 59.8 59.846 2 0.0051554 17744 20230619_1887_Aki_TMTPro18x_K_F7 81.972 60.524 56408 44258 52253 55913 55159 54033 51367 45740 53713 65893 70266 65479 63991 56712 63236 72786 60014 66986 52114 40622 53474 55476 56916 54622 52109 47875 55302 65488 71012 66213 65471 59621 64197 72536 57501 63659 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 5692500 29445 2702 27659 55338 44654;44655 44654 1625 2 9606 Homo sapiens 0.0039025456053423113 VMLETPEYR Unmodified 1136.5536 0.55359527 572 Q9NUQ9;A0A024R9G4;A0A8V8TMP7;Q68D08;Q9NUQ9-2;Q3ZTR9;B3KRB1;Q9H0Q0 FAM49B;DKFZp686B04128;BM009;FAM49A Protein FAM49B;Protein FAM49A yes no 0 0 0 4.5 0.5 1 1 49.403 49.458 2 0.0001351 13703 20230619_1883_Aki_TMTPro18x_K_F4 149.91 127.08 273730 233890 267960 325850 247580 275420 268790 266670 304990 365030 375430 375010 414590 346040 294360 415790 435640 419610 253140 214840 272700 320700 259410 282110 271060 275820 311780 363870 383420 379300 416230 361640 309890 416560 415340 398560 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 298870000 29446 572 27660 55339;55340 44656;44657 44656 2 9606 Homo sapiens -0.009219379826163276 VMLGETNPADSK Oxidation (M) 1276.5969 0.59691665 3490;1446;3276 A0A384MTW7;P15531;P15531-2;E7ERL0;O60361;Q32Q12;P22392-2;J3KPD9;Q6FHN3;P22392 NME1;NME2P1;NME1-NME2;NME2 Nucleoside diphosphate kinase A;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 1 0 4 0.707 1 2 1 45.641 45.701 2;3 3.0343E-05 12027 20230619_1883_Aki_TMTPro18x_K_F4 133.91 118.76 98268 59919 68842 85664 83113 104130 84347 87373 134200 95936 99002 120250 128020 120170 84148 183590 184070 212280 90496 55132 72706 84575 85514 103450 86472 90651 132410 97369 104580 121090 127890 127310 92412 184710 175340 201220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 323100000 29447 1446;3276;3490 27661 55341;55342;55343;55344 44658;44659 44659 937 2 9606 Homo sapiens -0.030317929960119727 VMLGETNPADSK Unmodified 1260.602 0.60200203 3490;1446;3276 A0A384MTW7;P15531;P15531-2;E7ERL0;O60361;Q32Q12;P22392-2;J3KPD9;Q6FHN3;P22392 NME1;NME2P1;NME1-NME2;NME2 Nucleoside diphosphate kinase A;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 0 0 4.67 0.471 1 2 49.121 49.178 2;3 3.3845000000000005E-25 13409 20230619_1885_Aki_TMTPro18x_K_F5 211.64 177.26 153350 100060 103160 130000 106760 140320 124980 112770 209570 139780 138640 190600 227060 208840 121620 341930 288380 368220 141240 91937 109210 128890 111580 140420 127450 117930 205740 141640 149660 192080 224310 221820 135980 342140 274860 349160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 651820000 29448 1446;3276;3490 27661 55345;55346;55347 44660;44661 44661 2 9606 Homo sapiens -0.017874891333804044 VMLGETNPADSKPGTIR Unmodified 1784.9091 0.90908309 3490;1446;3276 A0A384MTW7;P15531;P15531-2;E7ERL0;O60361;Q32Q12;P22392-2;J3KPD9;Q6FHN3;P22392 NME1;NME2P1;NME1-NME2;NME2 Nucleoside diphosphate kinase A;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 0 1 5.5 2.69 1 1 1 1 47.526 47.581 3 2.9954E-19 12471 20230619_1887_Aki_TMTPro18x_K_F7 192.53 171.75 547620 441280 505310 526560 428260 545860 535210 508570 556510 674950 640970 624410 715710 594870 622880 708170 648960 660840 505990 404760 515880 525090 454420 549580 534300 526670 569740 671540 656820 635180 723500 620660 636930 706990 620750 628130 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4486800000 29449 1446;3276;3490 27662 55348;55349;55350;55351 44662;44663;44664;44665 44664 4 9606 Homo sapiens 0.048024909579226005 VMLGETNPADSKPGTIR Oxidation (M) 1800.904 0.90399771 3490;1446;3276 A0A384MTW7;P15531;P15531-2;E7ERL0;O60361;Q32Q12;P22392-2;J3KPD9;Q6FHN3;P22392 NME1;NME2P1;NME1-NME2;NME2 Nucleoside diphosphate kinase A;Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 1 1 7.6 0.49 2 3 45.556 45.604 3 2.7292E-09 11468 20230619_1887_Aki_TMTPro18x_K_F7 137.27 114.26 619650 522320 594240 617320 525730 626230 627670 605840 659100 762320 773110 770290 817530 680660 735780 849460 778250 807420 572880 478960 604910 615870 554590 632130 628190 624660 674720 762090 789780 778650 828910 714020 752620 848270 744420 767230 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 17646000000 29450 1446;3276;3490 27662 55352;55353;55354;55355;55356 44666;44667;44668;44669;44670;44671;44672 44666 937 7 9606 Homo sapiens 0.035581870953137695 VMLLQQGLNDR Unmodified 1285.6813 0.6812554 4409 Q9BPX3;Q6NUR1 NCAPG Condensin complex subunit 3 yes no 0 0 0 1 0 1 55.287 55.287 3 0.017056 16538 20230619_1880_Aki_TMTPro18x_K_F1 61.363 35.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29451 4409 27663 55357 44673 44673 1 9606 Homo sapiens 0.049842026114447435 VMLQHELR Oxidation (M) 1040.5437 0.54369929 3002 G1UI18;Q14997;Q14997-3;Q14997-2 PSME4 Proteasome activator complex subunit 4 yes no 0 1 0 6 0 1 36.306 36.367 3 0.0070857 8127 20230619_1886_Aki_TMTPro18x_K_F6 77.732 55.772 31758 26048 30211 30247 44734 43133 41070 38192 60409 32351 43391 41299 37902 38052 38045 39833 44140 36504 29355 23884 31033 30375 45206 42542 42182 39203 59658 33350 45061 41437 38919 39411 39028 39819 42121 34734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19356000 29452 3002 27664 55358 44674 44674 1772 1 9606 Homo sapiens 0.025049188026514457 VMMNLSHEK 2 Oxidation (M) 1119.5053 0.50526487 1797 Q3MS95;Q3MS94;Q3MS96;A0A8Q3WKN1;U3NG26;A0A8Q3WLZ5;A0A8Q3SHZ6;A0A8Q3SI35;A0A8Q3WL62;Q06187;Q06187-2 BTK kinase deficient isoform 3;BTK kinase deficient isoform 4;BTK kinase deficient isoform 2;BTK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase BTK yes no 0 2 0 4 0.816 1 1 1 39.942 40.005 3 0.048149 9552 20230619_1883_Aki_TMTPro18x_K_F4 43.512 17.574 158220 105640 144720 159240 133100 144940 159170 146410 86653 180850 216850 243610 233800 190180 207870 229870 243820 222340 146030 97216 148040 156170 139680 147640 156890 150520 97890 182570 217330 242600 236740 200000 213930 229900 232790 211340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176010000 29453 1797 27665 55359;55360;55361 44675 44675 1161;1162 1 9606 Homo sapiens -0.049707548941341884 VMNLISK Unmodified 803.45751 0.45751004 1242 B4E0U6;A0A140VKA6;P50502;Q1XBU6;B7ZA40;Q8NFI4 ST13;ST13P5 Hsc70-interacting protein;Putative protein FAM10A5 yes no 0 0 0 3.5 0.5 1 1 55.973 55.995 2 0.0036291 16623 20230619_1883_Aki_TMTPro18x_K_F4 153.73 61.26 696980 532590 619110 678990 623200 778390 702500 659810 873260 737840 760730 763630 819880 679220 720570 887220 887080 806350 643620 488930 635920 674820 650290 776590 708860 684540 875150 742750 788340 771470 830310 714360 744550 883240 846580 767030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1921299999.9999998 29454 1242 27666 55362;55363 44676;44677 44677 2 9606 Homo sapiens 0.04791958967973642 VMPAPPPK Unmodified 835.4626 0.46259542 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 0 1.5 0.5 1 1 45.533 45.574 3 0.030455 12635 20230619_1880_Aki_TMTPro18x_K_F1 56.011 30.839 11615 10272 8785.3 11603 10883 13373 10650 11552 15855 12833 12947 13585 12971 15029 12511 10579 15085 14286 10724 9413.2 9209.4 11628 11161 13346 10910 11960 15735 12937 13425 13794 13246 15209 12860 10921 14403 13533 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110650000 29455 2578 27667 55364;55365 44678 44678 1 9606 Homo sapiens 0.03828262830586482 VMPFSTACNTPLSNFESHQNYK Unmodified 2571.1522 0.15224326 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;A0A804HK69;A0A804HKU1;A0A804HIG2 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 2 0 1 59.031 59.044 3 5.8783E-17 18201 20230619_1881_Aki_TMTPro18x_K_F2 150.98 139.35 26707 24348 29391 28085 20612 26901 26832 24749 23615 33076 27763 35153 40142 29374 32645 36632 36825 48048 24733 22315 29496 28052 22284 27242 26615 25671 24466 33024 28886 35365 40188 30919 33582 37314 35271 45474 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38062000 29456 1736 27668 55366 44679 44679 1 9606 Homo sapiens -0.07048677169950679 VMPLIIQGFK Unmodified 1144.6678 0.66783717 3614 P49903-2;P49903;Q5T5U6;B4DLS1;P49903-4;P49903-3;Q5T5U7 SEPHS1 Selenide, water dikinase 1 yes no 0 0 0 6 0 1 63.725 63.771 3 7.2627E-06 19818 20230619_1886_Aki_TMTPro18x_K_F6 135.79 117.01 105360 84927 91250 91699 87944 113760 115570 121210 126790 120840 121430 127830 133890 101040 110880 138740 128700 135760 97303 77825 93858 92401 92515 113500 115280 123250 128310 122330 125420 128560 135090 107160 114300 138560 123020 128950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 246110000 29457 3614 27669 55367 44680 44680 1 9606 Homo sapiens 0.10128996570165327 VMPNAIVQSVGVSSGK Unmodified 1571.8341 0.83412723 1627 O95831;O95831-3;A0A6Q8PFM5;A0A6Q8PG15;A0A6Q8PFE1;A0A7I2PK44;A0A6Q8PHJ9;A0A6Q8PHC0;A0A6Q8PFA7;A0A6Q8PFS4;A0A6Q8PFQ8;A0A7I2RLJ8;O95831-2;E9PMA0;A0A6Q8PFW2;A0A140VK04;O95831-5;A0A6Q8PHJ4 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 0 3 0 1 57.851 57.881 3 7.1181E-09 17531 20230619_1882_Aki_TMTPro18x_K_F3 142.54 117.58 39160 36872 39377 36101 34548 47245 43429 39889 52841 42912 38713 41078 49325 36286 47116 45301 45403 49723 36246 33742 39904 36697 36589 46757 43553 41341 52723 43181 40875 41616 49864 38104 47844 45630 43488 47165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13612000 29458 1627 27670 55368 44681 44681 1 9606 Homo sapiens 0.07108353217358854 VMPSDLNLMADNSQPENEK Unmodified 2130.9562 0.95616921 3780 Q01167-2;Q01167;E9PM37;E9PPI7;Q01167-3 FOXK2 Forkhead box protein K2 yes no 0 0 0 4 0 1 59.27 59.272 3 0.00013255 18047 20230619_1883_Aki_TMTPro18x_K_F4 75.91 68.778 15670 11870 13340 15166 11793 14573 12350 13849 13316 13796 16569 14240 21677 16851 16976 16371 18130 19690 14465 10898 13732 15036 12406 14760 12464 14198 13645 13962 17052 14540 21724 17286 17404 16648 17346 18661 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27347000 29459 3780 27671 55369 44682 44682 1 9606 Homo sapiens -0.06407062343851067 VMPSSFFLLLR Unmodified 1308.7264 0.72641468 3313 O75663 TIPRL TIP41-like protein yes yes 0 0 0 8 0 1 65.468 65.487 2 0.0048719 20144 20230619_1888_Aki_TMTPro18x_K_F8 94.692 59.884 21890 22318 19185 15862 18204 13604 20826 19820 22047 14232 16270 12193 14682 12756 15980 19840 15837 13731 20252 20374 19671 16568 19010 14116 20884 19672 22130 14629 16874 12528 15103 13504 16241 19470 15140 13114 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6499200 29460 3313 27672 55370 44683 44683 1 9606 Homo sapiens 0.08440053144636295 VMPYVDILFGNETEAATFAR Unmodified 2243.0933 0.093255043 1168 Q86U79;A0A140VJE0;P55263-2;P55263;A0A5K1VW54;A0A5K1VW94;P55263-4;A0A5F9ZH31;A0A5F9ZHJ1;A0A5F9ZGZ8 ADK Adenosine kinase yes no 0 0 0 8 0 1 65.874 65.893 3 3.587E-11 20324 20230619_1888_Aki_TMTPro18x_K_F8 123.59 119.81 6670.8 4370.9 8767.1 6060.9 3969.4 7118.6 7811 7414.1 7111.4 6806.8 9582.5 8472.9 9776.5 9065.8 8577.9 7990.5 7995.8 6920.6 6176.7 4018.9 8647.1 6001.7 4617.8 7115.5 7639.3 7538.4 7373.1 6963.6 9716.6 8552.8 9916 9268.2 8707.8 7992.8 7648.5 6588.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7572300 29461 1168 27673 55371 44684 44684 1 9606 Homo sapiens 0.021432145980270434 VMQEEIFGPILPIVPVK Unmodified 1908.0794 0.07944288 1574 A0A5F9ZHP6;Q68D64;A0A5K1VW72;J3QRD1;A0A5F9ZI12;A0A5F9ZHI5;A0A5F9ZGX4;Q59H65;A0A5F9ZHN9;P51648;P51648-2 DKFZp686E23276;ALDH3A2 Fatty aldehyde dehydrogenase yes no 0 0 0 2 0 1 65.725 65.731 3 0.012659 21114 20230619_1881_Aki_TMTPro18x_K_F2 59.513 44.827 3367.1 2404.2 3873.3 4242.8 3359.2 3386.1 4189 3861.5 4096.6 4234.2 5341.3 3980.2 3319.5 4531.7 4192.5 5502.5 5886 5100.2 3114.8 2216.5 3886.9 4120.1 3546.7 3498.5 4174.4 3924.6 4224.6 4251.8 5325.1 4079.5 3507.2 4699.6 4348.7 5487.5 5609.9 4851.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4931000 29462 1574 27674 55372 44685 44685 1 9606 Homo sapiens 0.16172633627525101 VMQEQGTHPK Oxidation (M) 1169.5499 0.54990688 148 P35579;A0A8I5KWT8;A0A024R1N1;P35579-2;Q86XU5;B4E3S1 MYH9 Myosin-9 yes no 0 1 0 4.5 0.5 1 1 29.877 29.948 3 0.0033386 5677 20230619_1885_Aki_TMTPro18x_K_F5 72.2 49.283 26307 10447 29604 28011 50110 49914 40868 54459 40481 29174 45095 51725 37972 36565 50851 19911 45262 44152 24272 9735.8 30095 27109 50117 48874 41759 54580 41395 31508 45815 50929 39608 37337 50998 21741 43353 41683 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 46026000 29463 148 27675 55373;55374 44686;44687;44688 44688 78 3 9606 Homo sapiens -0.02808607756469428 VMQPQILEVNFNPDCER Oxidation (M) 2103.9718 0.9717597 307 A0A024R4U3;Q14166;V9GY16 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 1 0 5 0 1 58.666 58.722 3 3.6755E-10 17389 20230619_1885_Aki_TMTPro18x_K_F5 143.14 137.81 34590 23126 32036 24734 27431 31535 29744 30116 53819 18407 19443 19743 21580 21034 25990 25889 25812 23944 31929 21207 32639 24966 28987 31341 30583 30547 51972 19354 21666 20054 22206 21895 26339 25831 24685 22770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45059000 29464 307 27676 55375 44689 44689 188 1 9606 Homo sapiens -0.03606731036097699 VMQPQILEVNFNPDCER Unmodified 2087.9768 0.97684508 307 A0A024R4U3;Q14166;V9GY16 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 5.5 0.5 1 1 61.769 61.821 3 0.0001994 18931 20230619_1886_Aki_TMTPro18x_K_F6 84.829 81.168 68206 56534 71655 74221 76638 69416 78503 64351 73694 107300 113150 118980 129880 102740 119980 129370 126280 146970 63099 51900 72574 73434 79099 70498 78916 67304 77078 106440 115020 119690 131480 107990 122590 130520 120910 139330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206560000 29465 307 27676 55376;55377 44690 44690 1 9606 Homo sapiens -0.023624271735116054 VMQQQQQTTQQQLPQK Unmodified 1940.9738 0.97380861 146 A0A024R1K8;Q15459;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 1 0 1 44.258 44.258 3 1.3624E-08 11971 20230619_1880_Aki_TMTPro18x_K_F1 139.66 124.27 50201 37623 48152 52600 57746 65979 61223 56116 66702 71407 82504 90126 99349 78421 63024 90616 97944 101790 46380 34577 49265 52040 59335 65459 61692 58435 68302 71920 84647 90240 99115 81958 66804 91404 93401 96548 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154780000 29466 146 27677 55378 44691 44691 1 9606 Homo sapiens 0.040960657639516285 VMQQQQQTTQQQLPQK Oxidation (M) 1956.9687 0.96872323 146 A0A024R1K8;Q15459;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 1 0 8 0 1 40.785 40.778 3 2.7372E-06 9771 20230619_1888_Aki_TMTPro18x_K_F8 114.88 97.184 23357 17145 18335 17266 23930 26529 24094 25149 28180 20157 28097 29176 21889 22975 24863 26448 29833 26752 21545 15708 19122 17562 24437 26096 24408 25644 28430 20924 28572 29011 22715 24058 25512 26538 28475 25417 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 198800000 29467 146 27677 55379 44692 44692 66 1 9606 Homo sapiens 0.0285176190132006 VMQVLNADAIVVK Oxidation (M) 1414.7854 0.78538612 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 1 0 4.5 3.5 1 1 58.714 58.735 3 0.020557 17296 20230619_1888_Aki_TMTPro18x_K_F8 53.377 34.106 120530 114800 118890 129660 105770 130950 132110 118940 135590 152810 141620 147890 153470 128180 134120 169450 149330 174700 111550 105180 120800 129760 111700 132050 131790 123310 138290 152450 145580 149670 155330 135080 137770 169800 142910 165780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 317200000 29468 1229 27678 55380;55381 44693;44694 44694 770 2 9606 Homo sapiens 0.09458484648234844 VMQYHGCR Oxidation (M) 1065.4484 0.4484187 3784 Q01780-2;Q01780;B4DKG8;Q59G73;B4DFE4;K7EJ37 EXOSC10 Exosome component 10 yes no 0 1 0 8 0 1 27.147 27.181 3 0.054652 4650 20230619_1888_Aki_TMTPro18x_K_F8 45.335 35.802 5619.4 3303.7 5507.1 5101.8 7158.2 6489.2 6288 5903.6 7173.1 7195.8 8953.5 9237.3 8097 7008 6568.9 4638.7 11374 8777.5 5186.1 3043.2 5624.1 5021.5 7271 6444.9 6418.8 6106.9 7327.7 7264.5 9064.1 9198.4 8223 7182.2 6958.9 4938.6 10818 8302.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3988500 29469 3784 27679 55382 44695 44695 2468 1 9606 Homo sapiens -0.08168757659996118 VMSCDSFPIRR Unmodified 1366.6486 0.64857507 2740 C9J6P4;Q7Z2W4;A0A514C937;A8K9U6;Q7Z2W4-2;A0A7P0T8C6;Q05DV5;H7C5K1;Q7Z2W4-4;Q7Z2W4-5 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 0 0 1 3 0 1 44.807 44.88 3 0.0015502 11753 20230619_1882_Aki_TMTPro18x_K_F3 87.568 63.814 53932 40197 41256 48582 65482 57321 63440 59069 62492 57202 55414 46627 55284 49284 46811 55945 58827 53873 49744 36886 43362 48489 65940 57381 64016 60169 63449 57602 57122 47942 56055 51104 48461 55974 56135 51209 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 268740000 29470 2740 27680 55383 44696 44696 1 9606 Homo sapiens -0.020083277830963198 VMSQEIQEQLHK Oxidation (M) 1484.7293 0.72932781 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 0 5 0 1 44.033 44.112 3 0.00013393 11294 20230619_1885_Aki_TMTPro18x_K_F5 101.33 81.097 67126 43216 56451 50520 66465 65246 71706 68625 75222 72243 89810 105470 79346 73209 82234 94550 108790 110530 61905 39670 58344 50650 68340 64962 72105 69972 76978 73800 91121 104440 81519 77677 85105 95521 103850 104800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71588000 29471 3881 27681 55384 44697 44697 2564 1 9606 Homo sapiens 0.0063523174080728495 VMSQEIQEQLHK Unmodified 1468.7344 0.73441319 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5 0 1 49.69 49.766 3 1.9786E-05 13669 20230619_1885_Aki_TMTPro18x_K_F5 124.45 101.22 98762 77224 85557 83146 76436 97393 98410 90325 122230 109430 127900 124580 131010 120190 110360 133640 134140 133300 91196 70773 87880 83716 80875 97239 98678 93296 123320 110090 131050 125680 132700 124780 114030 134000 128110 126610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27536000 29472 3881 27681 55385 44698 44698 1 9606 Homo sapiens 0.01879535603416116 VMSQNFTNCHTK Unmodified 1465.6442 0.64421797 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7I2V5M7;A0A7P0P2U7;A0A7I2YQU8;A0A7I2V651;E5RJU8;A0A7I2V2S5;Q13283-2;E5RH42;E5RIF8;A0A7I2V533;A0A7I2YQB1;A0A7I2YQQ8 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 2 0 1 40.712 40.785 3 2.7645E-13 10164 20230619_1881_Aki_TMTPro18x_K_F2 207.12 179.69 369990 292710 338120 315340 316610 403600 370900 380870 398530 402620 354170 311060 411210 343090 267550 452000 447270 350530 341810 268240 345730 317960 332520 400850 371770 391050 402910 403020 367500 321350 411230 358580 285490 446260 425540 334360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 645480000 29473 3846 27682 55386 44699 44699 1 9606 Homo sapiens -0.06997836996674778 VMSQNFTNCHTK Oxidation (M) 1481.6391 0.63913259 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7I2V5M7;A0A7P0P2U7;A0A7I2YQU8;A0A7I2V651;E5RJU8;A0A7I2V2S5;Q13283-2;E5RH42;E5RIF8;A0A7I2V533;A0A7I2YQB1;A0A7I2YQQ8 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 1 0 8 0 1 36.699 36.686 3 2.1441E-07 8166 20230619_1888_Aki_TMTPro18x_K_F8 159.66 137.33 43013 32030 43820 46506 43932 49824 45320 50851 52528 40269 48464 35862 44279 35435 38565 52696 50955 41516 39756 29450 44463 45808 45676 50130 45864 51580 52891 41149 49638 36689 45054 37477 40076 52008 48568 39585 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45530000 29474 3846 27682 55387 44700 44700 2520 1 9606 Homo sapiens -0.08242140859283609 VMTIAPGLFGTPLLTSLPEK Unmodified 2084.1591 0.15914976 1085 A0A0S2Z410;Q99714 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 4.5 0.5 1 1 65.941 65.968 3 1.6001E-12 20550 20230619_1885_Aki_TMTPro18x_K_F5 144.68 129.99 88150 80176 77856 93163 70447 126800 115750 116080 118420 118940 97285 110120 128040 107390 82838 134090 127810 140900 81488 73489 80023 93445 75361 125280 114120 119360 119700 119800 102210 112090 127600 112320 87798 134530 121950 133700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 501630000 29475 1085 27683 55388;55389 44701 44701 1 9606 Homo sapiens 0.1604365551088449 VMTIPYQPMPASSPVICAGGQDR 2 Oxidation (M) 2506.1655 0.16545048 3929 Q15365;Q53SS8 PCBP1 Poly(rC)-binding protein 1 yes no 0 2 0 1.5 0.5 1 1 53.223 53.24 3 1.8358E-08 15679 20230619_1880_Aki_TMTPro18x_K_F1 99.999 90.952 14276 10198 10850 14672 13267 13050 14242 12306 12276 12892 13569 13720 14616 12121 12509 17070 15901 15605 13164 9377.5 11364 14418 13604 13304 14239 12652 12675 13021 13909 13846 14785 12816 12970 16977 15179 14838 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95502000 29476 3929 27684 55390;55391 44702 44702 2604;2605 1 9606 Homo sapiens -0.027385623822283378 VMTIPYQPMPASSPVICAGGQDR Oxidation (M) 2490.1705 0.17053586 3929 Q15365;Q53SS8 PCBP1 Poly(rC)-binding protein 1 yes no 0 1 0 1.67 0.471 1 2 57.994 58.004 3 9.1133E-14 17884 20230619_1881_Aki_TMTPro18x_K_F2 139.26 129.78 59146 50436 56744 65069 53466 58103 56445 54571 71186 68327 68776 66231 65747 60239 63509 71843 74580 76130 54687 46288 57835 64405 55897 59211 57210 56393 71592 68270 70527 67134 67135 62944 65278 72225 71261 72257 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 323690000 29477 3929 27684 55392;55393;55394 44703;44704;44705 44704 2604;2605 3 9606 Homo sapiens -0.014942585195967695 VMTIPYQPMPASSPVICAGGQDR Unmodified 2474.1756 0.17562124 3929 Q15365;Q53SS8 PCBP1 Poly(rC)-binding protein 1 yes no 0 0 0 2.5 0.5 1 1 61.306 61.326 3 5.3843E-26 19148 20230619_1881_Aki_TMTPro18x_K_F2 174.63 159.04 70810 73664 76763 91965 61059 87479 87693 73713 80531 95269 93210 82932 110560 80785 99081 102760 105880 125720 65632 67539 77375 91280 65480 88444 86653 76905 83023 94747 95744 84724 111640 84693 101350 104160 101370 119090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1214800000 29478 3929 27684 55395;55396 44706 44706 1 9606 Homo sapiens -0.0024995465701067587 VMTVNYNTHGELGEGAR Oxidation (M) 1862.8581 0.85811015 1795 A0A8Q3SHU8;P82663;E7EPW2;P82663-2;A0A8Q3WLJ1;A0A8Q3WKJ5;A0A8Q3WKE1;A0A8Q3WKH6;P82663-3 MRPS25 28S ribosomal protein S25, mitochondrial yes no 0 1 0 4 0 1 39.44 39.483 3 2.1677E-18 9324 20230619_1883_Aki_TMTPro18x_K_F4 171.71 152.61 32114 33251 33019 35215 47979 49162 39776 39681 45954 39957 46359 40511 47125 38236 40653 44550 47669 45198 29751 30440 33700 35589 48406 48459 40770 41191 46475 40408 47533 41058 47756 39863 41860 44695 45524 42931 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108390000 29479 1795 27685 55397 44707 44707 1160 1 9606 Homo sapiens -0.03880458086905492 VMTVNYNTHGELGEGAR Unmodified 1846.8632 0.86319553 1795 A0A8Q3SHU8;P82663;E7EPW2;P82663-2;A0A8Q3WLJ1;A0A8Q3WKJ5;A0A8Q3WKE1;A0A8Q3WKH6;P82663-3 MRPS25 28S ribosomal protein S25, mitochondrial yes no 0 0 0 5 0 1 43.728 43.808 3 5.5873E-30 11111 20230619_1885_Aki_TMTPro18x_K_F5 179.03 161.54 70706 55497 80176 78783 94328 92470 81353 78097 92628 85658 94984 99404 101120 81348 70461 104530 110350 117560 65436 51002 80839 77805 96404 92152 83151 81001 93835 86603 97598 99693 101560 85770 74580 105290 105250 111500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71117000 29480 1795 27685 55398 44708 44708 1 9606 Homo sapiens -0.026361542242966607 VMVDENTWTNLLSR Oxidation (M) 1692.8141 0.81412007 4484 Q9C0F1;Q9C0F1-2 CEP44 Centrosomal protein of 44 kDa yes no 0 1 0 7.5 0.5 1 1 62.121 62.153 3 2.8776E-07 18713 20230619_1888_Aki_TMTPro18x_K_F8 138.21 102.41 54958 46869 56425 54322 50801 53572 56657 58190 65400 61006 62104 66177 66677 53101 58822 68598 65926 62931 50843 42968 57093 54268 53353 54355 57082 59206 66000 61654 64099 66500 67515 56028 60397 68344 62988 59843 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66212000 29481 4484 27686 55399;55400 44709 44709 2785 1 9606 Homo sapiens -0.004574425132204851 VMVELLGSYTEDNASQAR Unmodified 1981.9415 0.94150543 4152 Q7L2H7;J3KNJ2;Q7L2H7-2;H0YCQ8;E9PRY0 EIF3M Eukaryotic translation initiation factor 3 subunit M yes no 0 0 0 5 0 1 62.943 62.99 3 1.0949E-10 19278 20230619_1885_Aki_TMTPro18x_K_F5 135.57 127.18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29482 4152 27687 55401 44710 44710 1 9606 Homo sapiens -0.010187664296836374 VMVLDFVTPTPLGTR Unmodified 1644.8909 0.89091383 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;E9PKD3;A0A0B4J225;E9PIZ5;E9PKI4;E9PLT3;E9PQI3 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 0 3.2 0.748 1 2 2 64.148 64.166 2;3 1.5155E-05 20230 20230619_1882_Aki_TMTPro18x_K_F3 109.1 60.023 40641 22860 25626 29937 23627 40066 28953 33726 38934 33912 37957 39838 49466 40023 39614 63891 58316 68280 37392 21023 27291 29771 25015 39555 29204 34880 39047 34465 39498 40249 49666 42558 41625 63974 55685 64769 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 196940000 29483 682 27688 55402;55403;55404;55405;55406 44711;44712 44711 2 9606 Homo sapiens 0.09426400773895693 VMVQPINLIFR Oxidation (M) 1344.7588 0.75877744 3714 P62304 SNRPE Small nuclear ribonucleoprotein E yes yes 0 1 0 6 0.816 1 1 1 62.558 62.602 2 0.00043244 19251 20230619_1886_Aki_TMTPro18x_K_F6 114.64 82.511 989760 888730 920860 1066500 1214400 1302700 1131400 1080600 1345400 997090 1022900 872410 945640 811230 1066700 1058900 989920 931440 915240 814890 946430 1065200 1236100 1294400 1151700 1117200 1344800 1009300 1060600 890140 973460 851840 1078300 1053100 947480 886250 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1208300000 29484 3714 27689 55407;55408;55409 44713;44714 44714 2398 2 9606 Homo sapiens 0.10018840547581931 VMVQPINLIFR Unmodified 1328.7639 0.76386282 3714 P62304 SNRPE Small nuclear ribonucleoprotein E yes yes 0 0 0 6 0 1 63.778 63.825 2 5.1512E-17 19834 20230619_1886_Aki_TMTPro18x_K_F6 190.73 144.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29485 3714 27689 55410 44715 44715 1 9606 Homo sapiens 0.11263144410213499 VMVTDADR Oxidation (M) 921.42258 0.4225811 2144;1327 A0A1W6S962;X5D7Q9;P78347-5;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52 GTF2I General transcription factor II-I no no 0 1 0 2 0 1 34.841 34.898 2 0.0013229 7615 20230619_1881_Aki_TMTPro18x_K_F2 137.88 110.18 68291 45698 65080 66354 95538 95898 77568 80831 98633 71004 91912 90021 81929 74286 83081 61995 95932 86116 63050 42036 66828 65669 96311 94378 79900 83332 98923 72926 94170 89968 84031 76501 85046 63929 91595 81573 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102980000 29486 1327;2144 27690 55411 44716 44716 834 1 9606 Homo sapiens -0.04127328630647753 VMYGFCSVK Unmodified 1089.4987 0.49872293 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;D6RFI1 DBN1 Drebrin yes no 0 0 0 4 0 1 55.444 55.456 2 0.00013629 16425 20230619_1883_Aki_TMTPro18x_K_F4 167.24 124.64 216930 199760 190480 194040 179730 263340 203970 204950 256090 66572 69184 68724 69470 61083 105060 77135 75727 75455 200550 182810 195630 197430 188860 259590 205770 209730 249840 75169 79882 69565 72674 64099 104430 77254 72736 71686 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48889000 29487 1396 27691 55412 44717 44717 1 9606 Homo sapiens -0.042446480548733234 VNAELQAR Unmodified 899.48248 0.48247924 1627 O95831;O95831-3;A0A6Q8PFM5;A0A6Q8PG15;A0A6Q8PFE1;A0A7I2PK44;A0A6Q8PHJ9;A0A6Q8PHC0;A0A6Q8PFA7;A0A6Q8PFS4;A0A6Q8PFQ8;A0A7I2RLJ8;O95831-2;E9PMA0;A0A140VK04;O95831-5 AIFM1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 0 4.5 0.5 1 1 37.187 37.255 2 0.0055228 8439 20230619_1883_Aki_TMTPro18x_K_F4 113.26 63.833 124520 71674 124400 122060 143130 137780 134480 141520 155350 120260 159180 155060 156870 134750 150420 93757 181480 153220 114930 66114 126620 119290 146820 138190 136790 143740 157080 123780 163020 155080 159890 137570 154440 98415 173140 145000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137430000 29488 1627 27692 55413;55414 44718;44719 44718 2 9606 Homo sapiens 0.028717300948869706 VNAIEHVIIPR Unmodified 1259.735 0.73500553 384 Q9H3H0;A0A024R683;Q9Y5K8;G3V2S6;Q8N5Z9;G3V2V6;Q6PJ05;H0YJH8 VATD;ATP6V1D V-type proton ATPase subunit D yes no 0 0 0 8 0 1 50.993 51.07 3 0.015105 13997 20230619_1888_Aki_TMTPro18x_K_F8 64.224 22.241 125180 112000 116950 120940 107000 131590 122730 119850 133130 140700 135280 135740 166730 127360 123770 166890 170950 160620 115760 102590 119370 121590 112480 132010 123190 123820 135220 140940 140040 137790 167080 133810 129450 166590 163030 152660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 25135000 29489 384 27693 55415 44720;44721 44721 2 9606 Homo sapiens 0.11552743105448826 VNASASSLK Unmodified 875.47125 0.47124585 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 0 8 0 1 41.832 41.829 2 9.0698E-05 10205 20230619_1888_Aki_TMTPro18x_K_F8 178.32 110.11 88949 44131 108590 87636 179520 224440 115850 156850 163700 21940 35324 33757 26870 30651 78407 18042 44295 30597 82197 40836 109630 86613 179410 214780 121990 161060 158530 30064 42003 33739 30235 31028 76596 19238 42616 28979 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44240000 29490 1426 27694 55416 44722 44722 1 9606 Homo sapiens 0.02852908000750176 VNASASSLKK Unmodified 1003.5662 0.56620887 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 1 3 0 1 40.617 40.676 3 8.1707E-05 9880 20230619_1882_Aki_TMTPro18x_K_F3 114.71 58.279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29491 1426 27695 55417 44723 44723 1 9606 Homo sapiens 0.06456841471947428 VNATGPQFVSGVIVK Unmodified 1514.8457 0.84567819 1769 Q4G0J3-3;A0A8I5KUI4;Q4G0J3;A0A8Q3SHG9;A0A8Q3SHN7;H0YA82;A0A8Q3SHF1;A0A8Q3SHH4;A0A8Q3WK75;A0A8I5KSZ3;A0A024RDH5;Q4G0J3-2;D6R9Z6 LARP7;HDCMA18P La-related protein 7 yes no 0 0 0 3 0 1 58.002 58.032 3 1.8383E-11 17628 20230619_1882_Aki_TMTPro18x_K_F3 135.72 121.36 69327 54012 61212 69598 66025 80930 70018 80250 81786 79607 72200 76432 91241 72345 79105 88895 81499 92151 64024 49586 62988 69144 68405 80928 70756 81970 82321 80391 75394 77604 91907 75676 80841 89218 78029 87452 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88517000 29492 1769 27696 55418 44724 44724 1 9606 Homo sapiens 0.10884918303031554 VNAVPRPIPEKK Unmodified 1346.8034 0.80341945 10 Q96JZ5;A0A024QYS2;Q9HD45;Q8WUB5;Q8NCC4;B4DN13;Q96K55 SMBP;TM9SF3 Transmembrane 9 superfamily member 3 yes no 0 0 2 4 0 1 41.498 41.541 4 0.048063 10206 20230619_1883_Aki_TMTPro18x_K_F4 54.343 42.729 94318 87314 101850 102670 130650 110470 125620 119480 112520 111950 105160 72143 79894 56043 120220 51348 61556 37969 87342 80036 103240 102570 132940 111430 126540 121220 115120 112280 107010 74496 84095 58166 117910 51179 59300 36291 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108930000 29493 10 27697 55419 44725 44725 1 9606 Homo sapiens 0.14388987685310894 VNCIQWHQDSGCLYSCSDDK Unmodified 2470.994 0.99402806 3916 Q15061;C9JEE7 WDR43 WD repeat-containing protein 43 yes no 0 0 0 6 0 1 50.549 50.626 3 1.2418E-05 14141 20230619_1886_Aki_TMTPro18x_K_F6 94.384 86.938 47524 44659 47375 53565 44259 54444 54462 55032 46487 64266 56053 55927 80849 54785 43847 76098 70609 76727 43983 40942 48139 53378 46504 54994 54100 56423 48307 64161 58108 57142 79892 57759 46892 76055 67342 72847 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33013000 29494 3916 27698 55420 44726;44727 44726 2 9606 Homo sapiens -0.18262919420658363 VNCSFYFK Unmodified 1063.4797 0.47970205 3777 Q01081;B5BU08;Q01081-2;Q8WU68-3;Q8WU68;A0A1B0GW87;M0QYK5;Q69YM7;M0R2N4;Q01081-3;Q8WU68-2 U2AF1;U2AF1L4;DKFZp313J1712 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit yes no 0 0 0 3.2 0.748 1 2 2 54.93 54.957 2;3 0.0017928 16313 20230619_1882_Aki_TMTPro18x_K_F3 153.73 117.54 417780 337150 344890 354400 417790 552630 352530 441790 548080 114250 98664 71647 97927 79448 238250 110280 112660 66602 385720 308880 357610 359160 427800 540990 365200 449860 528050 132640 122420 75355 106740 83315 232140 108310 108690 63891 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 451100000 29495 3777 27699 55421;55422;55423;55424;55425 44728;44729 44728 2 9606 Homo sapiens -0.04949861354270979 VNDAMNMGHTAK Unmodified 1287.57 0.56999039 412 H3BNT2;A0A024R6U3;O75208;H3BSJ5;H3BRC0 COQ9;hCG_2025883 Ubiquinone biosynthesis protein COQ9, mitochondrial yes no 0 0 0 7 0 1 40.33 40.398 3 0.0014889 9418 20230619_1887_Aki_TMTPro18x_K_F7 83.087 70.727 50215 36468 44001 48798 66836 71363 67339 63243 78536 62345 66902 65439 69417 58540 65975 66353 70504 69330 46352 33502 45597 48544 67634 70254 68164 65132 78870 63192 69295 66071 70608 61034 67399 66725 67406 65823 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99894000 29496 412 27700 55426 44730 44730 1 9606 Homo sapiens -0.06229180088166686 VNDGVCDCCDGTDEYNSGVICENTCK Unmodified 3040.1249 0.12492017 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;K7EPW7;A0A7I2V2T6;K7EKX1;K7EJ70 PRKCSH Glucosidase 2 subunit beta yes no 0 0 0 1.5 0.5 1 1 50.901 50.924 3;4 8.5189E-61 14862 20230619_1881_Aki_TMTPro18x_K_F2 243.35 243.35 108910 77168 90969 102920 100030 127640 127350 118800 123630 133980 134200 154270 141440 124650 135300 158990 140630 159090 100490 70898 94155 102120 104060 126920 126670 122390 126630 135170 137680 154640 143860 131330 138120 159160 134630 151030 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 223950000 29497 444 27701 55427;55428 44731;44732;44733 44732 3 9606 Homo sapiens -0.3135372940778325 VNDTIQIDLETGK Unmodified 1444.7409 0.74093835 2202 Q96IR1;B2R491;P62701;Q53HV1 RPS4X 40S ribosomal protein S4;40S ribosomal protein S4, X isoform yes no 0 0 0 3 0 1 57.369 57.402 2 7.5909E-05 17354 20230619_1882_Aki_TMTPro18x_K_F3 138.45 118.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29498 2202 27702 55429 44734 44734 1 9606 Homo sapiens 0.0363575203577966 VNEAAPEKPQDDSGTAGGISSTSASVNR Unmodified 2744.2849 0.28490823 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2 UBR4 E3 ubiquitin-protein ligase UBR4 no no 0 0 1 4 0 1 42.231 42.274 4 1.3327E-28 10546 20230619_1883_Aki_TMTPro18x_K_F4 178.02 166.91 18160 13135 17078 16826 18186 22255 18347 19097 23607 17825 23841 23381 21166 20755 20851 23907 29114 24850 16772 12062 17455 16759 18836 22011 18657 19691 23731 18267 24328 23411 21701 21646 21679 24019 27746 23608 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90940000 29499 4061 27703 55430 44735 44735 1 9606 Homo sapiens -0.017462826986957225 VNEALLQR Unmodified 941.52943 0.52942943 1682 A0A7L4XSC9;A0A7M2JGN3;A0A7L4XVG2;Q53Y41;Q6IBS8;A0A7S6PWV5;B4DPL5;A0A7L4XVT7;A0A7L4XUZ5;A0A7S6PWV2;A0A7L4XT53;A0A3S5X9I4;A0A3Q8A2L5;P20711;P20711-3;A0A7L4XT01;A0A087WV24;A0A3S5WLQ6;A0A0S2Z3N4;A0A3Q7ZZZ2;A0A3Q7ZYN3;A0A3S6D699;B4DPG2;A0A3S6CJ90;A0A3S6CVP2;A0A087WU57;A0A3S6CPU7;A0A3S6CPV2;A0A3S6CS67;H7BZF7;A0A3S5XFR7;A0A3S6CVQ1;A0A5C0B7Z4;A0A3S6CLD8;A0A5C0B937;A0A3Q8A2M4;A0A3S6CN46;A0A3S6D691;A0A3S5X9H9;A0A3Q8A018;A0A3S6CJ93;A0A3S5WLQ3;A0A5C0BAW3;A0A3S5X9H4;A0A3Q7ZZY9;A0A3Q8A2K4;P20711-4;A0A5C0B869;A0A3S7HNV4;A0A3S6CPK2;A0A3S5X9H5;A0A3S6CYS1;A0A3S6CS78;A0A3Q7ZZZ7;A0A3S6CLE2;A0A5C0BC39;A0A3S6CN52;A0A3Q8A2N0;A0A3S5X9I6 DDC Aromatic-L-amino-acid decarboxylase yes no 0 0 0 6 0.816 1 1 1 44.156 44.24 2 0.032161 11336 20230619_1886_Aki_TMTPro18x_K_F6 78.149 44.06 460340 402670 423670 487240 571550 601260 616080 605330 709820 663000 716790 679120 740490 594610 661850 838780 702580 656910 425560 369280 436120 486600 583060 599510 621260 619520 718010 667520 735840 686390 751020 628890 677630 828320 671510 626030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 519910000 29500 1682 27704 55431;55432;55433 44736 44736 1 9606 Homo sapiens 0.05632589646040742 VNEASGDGDGEDAVVILEK Unmodified 1915.9011 0.9010804 1436 A0A384MTI8;Q96C86;Q53G42 DCPS m7GpppX diphosphatase yes no 0 0 0 1 0 1 57.785 57.785 2 1.0542E-08 17588 20230619_1880_Aki_TMTPro18x_K_F1 156.5 132.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29501 1436 27705 55434 44737 44737 1 9606 Homo sapiens -0.020234095484738646 VNEHEQDGNELQTTPEFR Unmodified 2141.9614 0.96138925 2615 G5EA44;B4DWJ9;F5H7W8;Q96C57;F5H3K2;E7ENF1;B4DRA4 C12orf43 Uncharacterized protein C12orf43 yes no 0 0 0 1.5 0.5 1 1 41.841 41.88 3 3.4512E-24 10708 20230619_1881_Aki_TMTPro18x_K_F2 211.16 200.97 47119 38962 45809 47471 51269 62899 49168 50463 64093 45800 49360 54476 55216 45530 47353 52367 56111 55889 43563 35741 46741 47436 52845 62129 50158 52285 63817 46847 51621 54600 55799 47628 48799 52700 53601 53047 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 123770000 29502 2615 27706 55435;55436 44738 44738 1 9606 Homo sapiens -0.06391299165397868 VNEISVEVDSDPR Unmodified 1457.6998 0.69980182 2980 F8VPD4;P27708;Q53SY7;H7C2E4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 2 0 1 48.843 48.908 2 0.011458 13924 20230619_1881_Aki_TMTPro18x_K_F2 73.781 58.809 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29503 2980 27707 55437 44739 44739 1 9606 Homo sapiens -0.010740090036733818 VNEIVETNRPDSK Unmodified 1499.758 0.7579854 3908 Q15008;Q15008-4;B3KT66;Q15008-3;Q15008-2 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 1 4.5 0.5 1 1 42.482 42.545 3 0.0015898 10623 20230619_1885_Aki_TMTPro18x_K_F5 83.106 34.446 198770 156570 176780 205100 212500 231260 214550 219820 286710 251060 263260 249730 264650 217020 216460 302230 298620 272440 183590 143760 182120 203430 218100 231590 218410 226160 286990 252100 271090 252640 267820 229450 225960 300410 284740 259180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 435770000 29504 3908 27708 55438;55439 44740;44741 44741 2 9606 Homo sapiens 0.028096726416151796 VNEMIVTGQYGR Unmodified 1365.6711 0.67108465 4162 Q7Z2W9;F5H7V8;B4DXI4 MRPL21 39S ribosomal protein L21, mitochondrial yes no 0 0 0 8 0 1 50.223 50.299 2 0.00020421 13635 20230619_1888_Aki_TMTPro18x_K_F8 129.82 93.939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29505 4162 27709 55440 44742 44742 1 9606 Homo sapiens 0.0028759488620835327 VNEVGVDVNR Unmodified 1099.5622 0.56218613 4147 Q7KZ85 SUPT6H Transcription elongation factor SPT6 yes yes 0 0 0 3 0 1 41.283 41.342 2 1.3154E-06 10173 20230619_1882_Aki_TMTPro18x_K_F3 175.07 147.54 68948 49659 60595 67025 75585 80364 75428 74083 93563 81742 82187 89752 89368 80432 67305 90871 105890 94066 63643 45627 62512 66416 77343 80104 76601 76321 93831 82480 85196 90413 90013 83808 71080 91263 100860 89354 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70054000 29506 4147 27710 55441 44743 44743 1 9606 Homo sapiens 0.01638751978248365 VNEVNQFAAK Unmodified 1118.572 0.57202253 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;B4DGT1;B4DTV8;Q13813;A0A384P5S9;A0A024R889;Q13813-3 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 6.5 0.5 1 1 48.219 48.301 2 6.8962E-07 12811 20230619_1887_Aki_TMTPro18x_K_F7 207.83 167.79 166660 118550 129240 153330 178300 207410 192960 185290 240470 210460 238610 260070 233330 190930 209950 269030 267410 259650 153700 108880 135320 152630 181950 205070 195070 191490 242090 212900 244790 259440 237210 203320 217400 268390 255250 246740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139630000 29507 1022;3868 27711 55442;55443 44744 44744 1 9606 Homo sapiens 0.017479399836020093 VNFAMNVGK Oxidation (M) 994.4906 0.49060109 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 1 0 1 0 1 48.345 48.345 2 0.084642 13706 20230619_1880_Aki_TMTPro18x_K_F1 57.177 37.7 20396 19138 20337 23620 25648 32208 27486 23437 34827 15978 15135 18015 16622 15386 25858 18018 17052 16538 18876 17550 20773 23585 26311 31702 27801 24365 34222 16658 16563 18105 17367 16087 25602 18009 16397 15726 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18717000 29508 370;3451 27712 55444 44745 44745 226 1 9606 Homo sapiens -0.006864589799647547 VNFAMNVGK Unmodified 978.49569 0.49568646 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;Q504U3;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3;Q8WUW7 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 2.67 0.745 3 2 1 53.744 53.781 2;3 0.00043689 15807 20230619_1882_Aki_TMTPro18x_K_F3 99.139 78.268 687750 600360 597500 578170 775070 970700 831220 789050 993660 286450 254390 131040 134710 133980 453890 252350 230660 121590 635520 549470 617290 591190 793850 947430 838970 804940 971240 313210 290380 141150 156810 144210 442470 245030 222100 117270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 835020000 29509 370;3451 27712 55445;55446;55447;55448;55449;55450 44746;44747;44748 44748 3 9606 Homo sapiens 0.005578448826440763 VNFEDDSR Unmodified 980.41994 0.41993856 762 O94979-9;D6REX3;O94979-6;O94979-3;O94979-4;O94979-10;O94979-2;O94979;O94979-8;A0A1S5UZ19;A1LU61;A0A024RDH6;D6RHZ5;O94979-7;H7BXG7;O94979-5;H0YAB3;H0Y8V7;H0Y9K1 SEC31A;SEC31L1 Protein transport protein Sec31A yes no 0 0 0 1.5 0.5 1 1 40.539 40.576 2 0.0015284 10357 20230619_1880_Aki_TMTPro18x_K_F1 141.2 83.002 131610 105250 115190 145530 173860 197500 167310 154810 207050 178920 209900 221730 198370 186040 169380 205370 267540 260090 121550 96690 119470 144220 175910 194730 170200 161780 208690 180940 214750 221920 201680 194090 178350 209010 254980 246480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 383090000 29510 762 27713 55451;55452 44749 44749 1 9606 Homo sapiens -0.07105460763943938 VNFHMFDVGGQR Unmodified 1405.6561 0.65610329 1073 A0A0S2Z3H8;A0A7I2V5R6;Q5JWF2;Q5JWF2-2;P63092-4;P63092-3;P63092;P63092-2;Q5JWE9;A0A0S2Z3S5;Q14455;A0A590UJQ9;A0A590UK28;Q5FWY2;A0A804HIH4;B0AZR9;A0A0A0MR13;A0A590UJF0;A0A590UJS2;A0A590UJY2;Q8N2B4;P38405-2;A8K1Y9;P38405;B4DHG7;K7EPE2;K7EQ80 GNAS;GSA;GNAL Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(olf) subunit alpha yes no 0 0 0 2 0 1 53.257 53.29 3 1.5392E-07 15847 20230619_1881_Aki_TMTPro18x_K_F2 159.44 139.06 64873 49375 58793 64392 55373 67037 72127 62063 73274 79546 66262 74800 87943 64441 71067 85816 78207 88345 59913 45339 60227 63819 58281 67457 71763 64248 74382 79304 69324 75765 88201 68008 73040 85985 74829 83846 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120260000 29511 1073 27714 55453 44750 44750 1 9606 Homo sapiens -0.030498521911340504 VNFHMFDVGGQR Oxidation (M) 1421.651 0.65101791 1073 A0A0S2Z3H8;A0A7I2V5R6;Q5JWF2;Q5JWF2-2;P63092-4;P63092-3;P63092;P63092-2;Q5JWE9;A0A0S2Z3S5;Q14455;A0A590UJQ9;A0A590UK28;Q5FWY2;A0A804HIH4;B0AZR9;A0A0A0MR13;A0A590UJF0;A0A590UJS2;A0A590UJY2;Q8N2B4;P38405-2;A8K1Y9;P38405;B4DHG7;K7EPE2;K7EQ80 GNAS;GSA;GNAL Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(olf) subunit alpha yes no 0 1 0 8 0 1 46.913 46.961 3 0.0107 12256 20230619_1888_Aki_TMTPro18x_K_F8 64.224 56.299 50256 47706 47477 57901 54222 53817 58603 57243 81415 65986 64789 54545 67846 55431 58698 73307 68880 64621 46495 43739 48621 57579 55900 54834 59513 58485 80951 65916 67306 55980 68715 58107 60491 72850 65776 61485 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32932000 29512 1073 27714 55454 44751 44751 635 1 9606 Homo sapiens -0.04294156053765619 VNFTVDQIR Unmodified 1090.5771 0.57710791 3447 P13639;B4DPU3;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 0 0 7 0.816 1 1 1 51.229 51.306 2 5.6056E-06 14055 20230619_1888_Aki_TMTPro18x_K_F8 182.76 123.95 2216500 1871500 1904800 1908300 1806800 2208400 2074500 2091100 2111200 1668900 1509500 1131500 1476900 1175300 1829600 1836200 1635700 1139600 2047500 1713900 1959700 1929400 1893800 2207900 2077500 2132700 2123800 1693700 1574300 1177200 1524800 1245600 1843400 1795800 1563400 1091600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4398900000 29513 3447 27715 55455;55456;55457 44752;44753;44754 44754 3 9606 Homo sapiens 0.03544243846204154 VNHEPEPAGGATPGATLPK Unmodified 1841.9272 0.92717599 621 B7Z6Y2;A0A024RAF1;A0A024RAJ2;A0A024RAI5;A0A024RAI6;A0A024RAI4;A0A024RAF0;A0A024RAE9;A0A024RAG8;A0A024RAF6;A0A024RAJ3;A0A024RAG9;O00499-2;O00499-5;O00499-3;O00499-6;O00499-11;O00499-4;O00499-8;O00499-7;O00499-10;O00499-9;O00499;Q9BTH3;B7Z2Z2;Q8WWH9 BIN1 Myc box-dependent-interacting protein 1 yes no 0 0 0 4.67 0.471 1 2 41.972 42.043 3;4 1.9831E-19 10348 20230619_1885_Aki_TMTPro18x_K_F5 127.32 114.18 122800 50373 114680 124520 128930 129680 135380 141200 167760 183000 174630 169790 219330 154300 150330 242030 185400 197370 113140 46855 117430 119600 132930 130910 137150 144530 169510 182270 180680 172580 218950 164410 156530 239020 177130 187890 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 294280000 29514 621 27716 55458;55459;55460 44755;44756;44757;44758 44757 4 9606 Homo sapiens 0.039889492043130304 VNHPNIVK Unmodified 919.52395 0.52395013 1856 O43318;O43318-2;O43318-3;O43318-4;Q5U0C9;A0A8V8TR17;Q5U0D0;A0A8V8TQE8;A0A8V8TRC6;A0A8V8TRC0;A0A8V8TQ28;A0A8V8TPV8;A0A8V8TPW3 MAP3K7 Mitogen-activated protein kinase kinase kinase 7 yes no 0 0 0 1 0 1 37.034 37.034 3 0.010421 8827 20230619_1880_Aki_TMTPro18x_K_F1 73.931 54.318 38283 23107 33878 37778 42720 42890 39177 37434 55349 36777 40324 42035 48228 31861 37830 41892 43953 40258 35308 21297 34930 36985 43586 42848 40188 38615 54825 37405 42423 42094 48424 33767 39008 41835 41969 38268 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69642000 29515 1856 27717 55461 44759 44759 1 9606 Homo sapiens 0.06096910854239468 VNHVEKPPKVESK Unmodified 1489.8253 0.8252771 630 A0A024RAM4;P46821;A2BDK6;Q05BW8;D6RA32;Q86X89;Q32NB7;Q6PJD3;A5D6X1;Q4VBY4;D6RA40;A5D8X6 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 2 8 0 1 37.814 37.8 5 1.4862E-07 8590 20230619_1888_Aki_TMTPro18x_K_F8 151.56 134.05 160740 40540 142960 162610 183080 125780 156620 155600 159840 182300 209980 170320 156060 136410 183880 145760 157140 106730 147860 38349 147310 153470 185690 130640 159620 157660 164720 182330 210500 172340 162250 142250 184790 144320 150260 101970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147680000 29516 630 27718 55462 44760 44760 1 9606 Homo sapiens 0.09995747643188224 VNIAFNYDMPEDSDTYLHR Oxidation (M) 2315.0165 0.016461285 724 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;H0Y400 DDX39B;hCG_2005638 Spliceosome RNA helicase DDX39B yes no 0 1 0 4.2 0.748 1 2 2 55.527 55.565 3 1.3338E-14 16038 20230619_1885_Aki_TMTPro18x_K_F5 149.73 130.7 88622 77006 87151 100870 100170 102200 93593 101330 96195 110490 112860 118110 119220 102530 103480 113820 126750 129350 81967 70679 88914 99898 102770 103240 94891 103820 98619 111360 115320 119000 120740 106900 106840 115040 121070 122680 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 221430000 29517 724 27719 55463;55464;55465;55466;55467 44761;44762;44763 44763 433 3 9606 Homo sapiens -0.08844628689075762 VNIAFNYDMPEDSDTYLHR Unmodified 2299.0215 0.021546663 724 Q13838-2;A0A024RCM3;Q13838;Q5STU3;A0A0G2JJZ9;B4DP52;A0A140T9X3;H0Y400 DDX39B;hCG_2005638 Spliceosome RNA helicase DDX39B yes no 0 0 0 5 0.816 1 1 1 58.713 58.773 3 2.6758E-39 17395 20230619_1885_Aki_TMTPro18x_K_F5 246.95 229.09 35078 29888 38612 44254 32226 42580 38109 41117 39077 51235 52321 47449 49134 48740 50831 52601 46499 58188 32471 27472 38874 43467 34176 43120 38152 42375 40327 51104 52897 48398 50360 50424 51435 53108 44613 55165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102220000 29518 724 27719 55468;55469;55470 44764;44765 44765 2 9606 Homo sapiens -0.07600324826489668 VNIFGVESGKK Unmodified 1176.6503 0.65027285 3059 H0YN81;Q9GZS3;H0YMF9;H0YL19 WDR61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes no 0 0 1 2.5 0.5 1 1 51.699 51.751 3 0.00089233 14889 20230619_1882_Aki_TMTPro18x_K_F3 93.091 69.002 706710 595740 595830 668550 681900 777800 762040 729140 832550 723080 786860 748000 859390 689280 792250 820260 718350 711980 652750 546020 616320 670720 704110 777190 765710 748170 842060 732120 812460 756620 871160 719880 802870 816180 687980 677410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 912510000 29519 3059 27720 55471;55472 44766 44766 1 9606 Homo sapiens 0.06901372568859188 VNIGEVLDK Unmodified 985.54441 0.5444108 72 B4DZQ5;A0A024QZY5;Q13523;H0YDJ3 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 0 0 0 6 0 1 57.575 57.644 3 0.04586 17187 20230619_1886_Aki_TMTPro18x_K_F6 48.741 20.014 25520 22387 23798 27635 22503 28989 24314 27703 31113 30684 34519 35768 32918 28180 30436 33645 36263 43338 23595 20534 24325 27491 23574 29172 24639 28467 31443 31002 35190 35819 33533 29621 31335 34251 34689 41034 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68137000 29520 72 27721 55473 44767 44767 1 9606 Homo sapiens 0.051060367233731085 VNIIPLIAK Unmodified 979.643 0.64300263 1949 Q8TC62;E7EPK1;A4GYY8;Q3LIE9;Q16181;Q16181-2;E7ES33;B4DUD6;B4DNE4;A8K3D0;A0A024RA87;A0A023T695;G3V1Q4;B4DPQ6;Q59EY4;Q3B7A3;A0A0U1RRE1;A0A0U1RRH9;Q6ZU15 SEPT7;DKFZp686F17268;Nbla02942;SEPT14 Septin-7;Septin-14 yes no 0 0 0 4.5 0.5 1 1 62.031 62.057 2 0.00034695 18810 20230619_1885_Aki_TMTPro18x_K_F5 110.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29521 1949 27722 55474;55475 44768;44769 44769 2 9606 Homo sapiens 0.15236684759088348 VNIIPVIAK Unmodified 965.62735 0.62735256 2109 E7EW69;A8K7M3;E7EX04;B5ME97;Q9P0V9;Q9P0V9-2;Q9P0V9-3;Q9NSH2;Q59H84;B7Z371;Q9H9P7;F5GYV2;F5H1F2 SEPT10;DKFZp547B243 Septin-10 yes no 0 0 0 4 0 1 60.766 60.769 3 0.049486 18634 20230619_1883_Aki_TMTPro18x_K_F4 56.563 18.477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29522 2109 27723 55476 44770 44770 1 9606 Homo sapiens 0.14316398242021933 VNIISVTNK Unmodified 986.57605 0.57604528 4468 Q9BY44-3;Q9BY44;Q9BY44-4;C9IZE1;H7C5Q3 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed yes no 0 0 0 2.5 0.5 1 1 52.363 52.415 3 0.000202 15181 20230619_1882_Aki_TMTPro18x_K_F3 125.97 101.19 130590 108300 118820 120100 124740 147980 142550 144980 163040 113240 113890 104130 108930 91306 129620 112920 112980 103420 120670 99255 121800 120740 129710 147440 143300 147430 162810 115950 118940 105760 112320 95754 130430 112670 108200 98369 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 246170000 29523 4468 27724 55477;55478 44771;44772 44772 2 9606 Homo sapiens 0.08222029477337855 VNIKPQVDR Unmodified 1067.6087 0.60874239 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 1 3.67 3.09 1 1 1 40.448 40.47 3 0.00028642 10264 20230619_1880_Aki_TMTPro18x_K_F1 124.81 103.34 1787500 1435900 1617500 1604600 1759900 1837100 1714600 1694300 2066000 2348000 2526300 2216600 2479900 1932400 2197000 2531800 2353400 1868400 1651400 1316200 1659000 1610300 1815700 1837700 1743000 1758000 2104500 2333600 2565800 2247700 2517600 2034200 2249400 2496900 2246800 1783400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3294999999.9999995 29524 1439 27725 55479;55480;55481 44773;44774;44775 44773 3 9606 Homo sapiens 0.07764236600155527 VNILEVASGAVLR Unmodified 1339.7823 0.78234966 3820 Q12788 TBL3 Transducin beta-like protein 3 yes yes 0 0 0 3 0 1 63.459 63.49 3 4.7837E-06 19888 20230619_1882_Aki_TMTPro18x_K_F3 126.95 102.01 11478 9813.6 10160 12472 10829 12947 14691 9833.3 11771 13632 10620 12915 16730 12495 12254 13826 9500.8 15437 10607 9005 10459 12377 11299 12983 14484 10381 12132 13554 11235 13117 16650 12986 12398 13959 9158 14623 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144980000 29525 3820 27726 55482 44776 44776 1 9606 Homo sapiens 0.1260497758580641 VNILGEVVEK Unmodified 1098.6285 0.62847478 3551 Q05DK5;P35612-4;P35612-3;P35612;P35612-2;P35612-8;P35612-9;C9JTM0;C9J080 ADD2 Beta-adducin yes no 0 0 0 6.5 0.5 1 1 60.571 60.621 3 0.0005031 18379 20230619_1886_Aki_TMTPro18x_K_F6 101.93 65.595 31613 24843 29163 33799 26647 30839 17274 19582 22905 30430 34631 33727 34439 28673 35632 35219 33298 36082 29206 22820 29803 33336 27661 31151 18183 21093 23522 30270 34969 33922 35196 30092 36082 35338 31901 34252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68327000 29526 3551 27727 55483;55484 44777 44777 1 9606 Homo sapiens 0.08310567820285542 VNIVFNYDMPEDSDTYLHR Unmodified 2327.0528 0.052846792 3204 O00148;B4DX78;Q69YT6 DDX39A;DKFZp547B159 ATP-dependent RNA helicase DDX39A yes no 0 0 0 5 0 1 60.919 60.969 3 4.5233E-31 18310 20230619_1885_Aki_TMTPro18x_K_F5 222.09 204.72 38116 36624 44643 44316 38640 42230 48684 51825 49397 53979 46434 49178 54231 42212 53135 55401 49055 43938 35333 33576 44719 44119 40846 43086 48548 52325 50211 54261 48157 49898 55017 44473 53836 54821 46940 41872 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 400420000 29527 3204 27728 55485 44778 44778 1 9606 Homo sapiens -0.05759751792402312 VNIVPVIAK Unmodified 951.6117 0.6117025 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;C9J2Q4;H7C310;H7C2Y0 SEPT2 Septin-2 yes no 0 0 0 3.5 0.5 1 1 57.578 57.596 3 0.0084157 17440 20230619_1882_Aki_TMTPro18x_K_F3 78.934 54.813 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29528 3910 27729 55486;55487 44779;44780 44779 2 9606 Homo sapiens 0.13396111724989623 VNLAIWDTAGQER Unmodified 1471.7419 0.7419414 658 Q9UL25;A0A024RBA9;Q96GX3 RAB21 Ras-related protein Rab-21 yes no 0 0 0 7 0 1 58.894 58.943 3 0.00099756 17409 20230619_1887_Aki_TMTPro18x_K_F7 85.42 71.456 16010 12417 19251 14976 16676 17525 17804 16091 20329 17377 21077 22067 17937 17398 21220 17411 16366 21728 14824 11392 19220 14959 17542 17500 17972 16579 20581 17641 21467 22023 18569 18094 21234 17752 15743 20572 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11127000 29529 658 27730 55488 44781 44781 1 9606 Homo sapiens 0.024940111953583255 VNLEESSGVENSPAGARPK Unmodified 1939.9599 0.95993268 1657 Q8WVM8;A0A7I2V4B8;A0A7I2V5Z4;A0A7I2V3B4;A0A7I2V5I2;Q53GW1;Q8WVM8-2;Q8WVM8-3;A0A7I2V590;A0A7I2V320;A0A7I2V4U2;A0A7I2V3G4;A0A7I2V4R0;B7Z738;B7Z5N7;A0A7I2V448;A0A7I2V362;A0A7I2V2U5;H0YIZ7;A0A7I2V3C9;A0A7I2YQR2;A0A7I2V534;A0A7I2V5H5;G3V5E2;A0A7I2V321 SCFD1 Sec1 family domain-containing protein 1 yes no 0 0 1 5 0 1 42.708 42.791 3 3.3684999999999998E-40 10662 20230619_1885_Aki_TMTPro18x_K_F5 265.38 233.99 47242 35102 40115 50330 46975 57050 52644 52753 54081 51356 54504 61352 62950 49733 63270 67659 63856 66008 43604 32270 41519 49632 48453 57048 52791 54159 55036 52278 56338 61446 63969 52638 64388 67597 61106 62704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36010000 29530 1657 27731 55489 44782 44782 1 9606 Homo sapiens 0.027551115365213263 VNLFTDFDK Unmodified 1097.5393 0.53932542 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q86UM1;C9JZG1 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 7.5 0.5 1 1 62.14 62.172 2 7.6318E-06 18789 20230619_1887_Aki_TMTPro18x_K_F7 178.55 135.73 860100 736580 874850 905930 703270 914060 842790 866370 962280 1160500 1035100 1006700 1201700 907350 1004700 1317600 1069400 1196100 795650 675660 885190 901170 748970 922360 845940 896180 977750 1152100 1065600 1026000 1211000 961480 1030500 1309600 1023400 1136900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 497260000 29531 487 27732 55490;55491 44783;44784 44783 2 9606 Homo sapiens -0.005542671392504417 VNLLSFTGSTQVGK Unmodified 1449.7827 0.78274359 1415 P49419-2;A0A384MDZ8;P49419;A0A1B0GTG2;A0A1B0GW77;A0A1B0GTY9;P49419-4;A0A1B0GW82;A0A1B0GUA1;A0A1B0GTJ4;A0A1B0GV49;A0A0J9YWF7;A0A1B0GUY0 ALDH7A1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 4.5 0.5 1 1 61.557 61.582 3 2.3728E-07 18582 20230619_1885_Aki_TMTPro18x_K_F5 141.06 110.5 332980 297440 348370 352570 302170 378580 377750 361450 349780 365730 381330 431660 401130 359480 412940 391530 413320 482100 308190 272700 352010 351950 319710 380380 375760 370680 359270 371300 391130 432570 409430 374910 419620 398080 395940 456690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 757690000 29532 1415 27733 55492;55493 44785;44786 44786 2 9606 Homo sapiens 0.07584352514982129 VNLLSVLEAAK Unmodified 1155.6863 0.68632401 4423 Q9BRX8-2;Q9BRX8 FAM213A Redox-regulatory protein FAM213A yes no 0 0 0 2.5 0.5 1 1 64.543 64.575 3 0.0011591 20375 20230619_1882_Aki_TMTPro18x_K_F3 89.301 66.659 79294 67510 88515 73386 75144 90835 89674 93638 110470 68608 63046 46272 54854 40388 81988 83864 52491 46888 73410 61856 88869 73933 79564 90583 90224 94752 109330 70067 66503 47936 57490 44142 81282 81502 50469 44947 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177260000 29533 4423 27734 55494;55495 44787;44788 44788 2 9606 Homo sapiens 0.11470829745690025 VNLQMVYDSPLCR Oxidation (M) 1609.7592 0.75924773 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 1 0 1 0 1 55.734 55.734 3 0.0059733 16738 20230619_1880_Aki_TMTPro18x_K_F1 68.171 57.8 25160 22505 22693 25488 21997 25597 23540 27445 27988 35595 37288 26743 34496 28183 29148 37163 33482 33069 23260 20624 23263 25504 22968 25923 23807 28110 28659 35254 37616 27643 35030 29509 30019 36948 31990 31454 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148270000 29534 4109 27735 55496 44789 44789 2671 1 9606 Homo sapiens -0.02124152585520278 VNLQMVYDSPLCR Unmodified 1593.7643 0.76433311 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 1.5 0.5 1 1 60.453 60.458 3 1.0986E-21 18808 20230619_1881_Aki_TMTPro18x_K_F2 234.63 219.6 48096 42426 49118 43631 37000 49852 52317 55212 55828 62172 50612 52517 63852 53921 59522 65409 60290 60733 44502 38849 49610 44095 39864 50057 51993 56190 56528 62152 52781 53796 64542 56190 60676 65271 57681 57732 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97927000 29535 4109 27735 55497;55498 44790;44791 44791 2 9606 Homo sapiens -0.008798487228887097 VNLQNNPGAMEHFHMK Unmodified 1865.8665 0.86650677 3626 Q53HT6;Q53G72;P51572;P51572-2;A0A2R8Y5M6;C9JMD7;C9JSP1;C9JQ75;C9J0M4;C9JM14 BCAP31 B-cell receptor-associated protein 31 yes no 0 0 0 1 0 1 46.593 46.593 4 6.1848E-11 12943 20230619_1880_Aki_TMTPro18x_K_F1 154.07 139.64 57440 45505 59428 62218 42140 67274 59059 62921 73422 71199 67239 74095 83022 72026 69214 80034 74906 91793 53118 41800 59986 61514 45772 67476 59041 64796 73753 71618 70009 75000 83590 74806 71003 80923 71731 86999 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 315120000 29536 3626 27736 55499 44792 44792 1 9606 Homo sapiens -0.031791826512971966 VNLQNNPGAMEHFHMK 2 Oxidation (M) 1897.8563 0.85633601 3626 Q53HT6;Q53G72;P51572;P51572-2;A0A2R8Y5M6;C9JMD7;C9JSP1;C9JQ75;C9J0M4;C9JM14 BCAP31 B-cell receptor-associated protein 31 yes no 0 2 0 7.5 0.5 1 1 38.433 38.457 4 0.00025238 8656 20230619_1887_Aki_TMTPro18x_K_F7 82.837 61.238 67053 59156 67226 77352 112780 84562 82815 94530 91436 83857 99370 92977 81262 79259 107280 80671 98852 105650 62034 54292 68967 76712 112430 85286 85534 95557 92978 85580 100800 93528 84804 82277 108020 82529 94710 100060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145930000 29537 3626 27736 55500;55501 44793 44793 2317;2318 1 9606 Homo sapiens -0.056677903765148585 VNMPPAVDPAEFFVLMER Unmodified 2061.0064 0.0063542914 4472 Q9BYN8 MRPS26 28S ribosomal protein S26, mitochondrial yes yes 0 0 0 7.5 0.5 1 1 66.492 66.512 3 1.1521E-09 20548 20230619_1888_Aki_TMTPro18x_K_F8 134.21 109.01 4821.6 4058.4 3840.3 3636.6 5924 4863.1 4713 5117.2 5775.6 4407.6 3889.2 4024.1 5547.4 4748.4 6480.2 3572.6 4296.5 6367.3 4451.7 3712.9 4010.4 3728.3 5946.9 4837.6 4854.1 5187.7 5750.1 4484.3 4156.7 4124.7 5651.5 4818.1 6436.7 3774.5 4146.3 6010.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47541000 29538 4472 27737 55502;55503 44794 44794 1 9606 Homo sapiens 0.018291368425707333 VNNADDFPNLFR Unmodified 1420.6735 0.67352749 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 6 0 1 59.732 59.793 2 1.2524E-17 18027 20230619_1886_Aki_TMTPro18x_K_F6 232.88 208.01 110310 108070 120870 113540 64944 79558 88041 85311 86202 132610 120850 122700 151410 111260 108510 163810 139020 148940 102200 98946 121000 113870 72518 83229 87522 88092 89530 131090 123670 124660 151410 118000 113090 162750 132790 141590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73876000 29539 3833 27738 55504 44795 44795 1 9606 Homo sapiens -0.019982333845064204 VNNASLIGLGYTQTLRPGVK Unmodified 2100.1691 0.1691376 4704 Q9Y277;Q9Y277-2 VDAC3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 1 6.5 0.5 1 1 56.584 56.65 4 1.3328E-15 16685 20230619_1886_Aki_TMTPro18x_K_F6 148.91 112.28 215310 184220 236420 265450 289550 327180 289510 340140 340420 292450 265460 267230 310910 255850 273860 281620 259430 272560 199310 169280 239420 262120 296600 326300 293540 345060 340980 297390 277900 272050 314050 265720 278370 282100 248450 258920 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1115500000 29540 4704 27739 55505;55506 44796;44797;44798 44796 3 9606 Homo sapiens 0.16305979560456763 VNNEGCFIK Unmodified 1079.507 0.50697943 720 A0A087WZU5;A0A024RCI0;B4DRB0;B4DUZ1;B3KQJ7;Q59ED5;O43657 TSPAN6 Tetraspanin;Tetraspanin-6 yes no 0 0 0 6 0 1 47.294 47.375 2 0.0042701 12745 20230619_1886_Aki_TMTPro18x_K_F6 101.65 69.425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29541 720 27740 55507 44799 44799 1 9606 Homo sapiens -0.029593778138632842 VNNHLFHR Unmodified 1035.5362 0.53624615 2390 F8VNT5;F8VU68;B3KQV3;Q8TBX8-2;Q8TBX8;B3KWP7 PIP4K2C Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma yes no 0 0 0 2.5 0.5 1 1 31.726 31.797 3 0.00030591 6418 20230619_1881_Aki_TMTPro18x_K_F2 133.6 114.82 18846 12372 15495 19451 21201 20235 18576 19604 23142 17974 23481 24394 21253 17610 19147 19096 35089 21325 17379 11393 16124 19058 21491 20387 19024 20032 23309 18452 23980 24240 21679 18467 20379 19294 33323 20281 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11193000 29542 2390 27741 55508;55509 44800 44800 1 9606 Homo sapiens 0.0198994731726998 VNNSGISLCNLISAVTTPAK Unmodified 2058.0779 0.07793933 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8 DST Dystonin yes no 0 0 0 6 0 1 64.634 64.678 3 7.4079E-08 20231 20230619_1886_Aki_TMTPro18x_K_F6 106.49 90.095 16474 12195 17896 16875 13557 17139 17869 17423 16509 19958 23845 22361 22064 20979 20026 20890 23786 27459 15235 11207 17993 16662 14547 17308 17740 17852 17191 20100 24032 22548 22492 21682 20613 21359 22748 25998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41502000 29543 1693 27742 55510 44801 44801 1 9606 Homo sapiens 0.09122347800803254 VNNSSLIGLGYTQTLK Unmodified 1706.9203 0.9202997 1286 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 0 4 0 1 60.038 60.041 2 0.00083908 18338 20230619_1883_Aki_TMTPro18x_K_F4 84.365 46.643 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29544 1286 27743 55511 44802 44802 1 9606 Homo sapiens 0.09511636323759376 VNNSSLIGLGYTQTLKPGIK Unmodified 2102.1736 0.17355427 1286 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 1 5.67 0.471 1 2 58.619 58.681 3;4 3.6621000000000004E-45 17551 20230619_1886_Aki_TMTPro18x_K_F6 260.08 236.66 225080 206350 275740 290980 308470 341480 357580 370510 367490 346840 352620 325020 380160 299150 356930 321120 291300 253920 208670 189520 276550 287530 318910 342020 358000 375730 373230 351090 363570 330130 385720 310620 359520 318810 279090 242030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1072599999.9999999 29545 1286 27744 55512;55513;55514 44803;44804 44803 2 9606 Homo sapiens 0.16655443983381701 VNNSSLIGVGYTQTLR Unmodified 1720.9108 0.91079765 62 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;P45880-2;P45880-1;B4DKM5 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 3 0 1 54.228 54.275 2 0.0020388 16054 20230619_1882_Aki_TMTPro18x_K_F3 80.469 53.954 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29546 62 27745 55515 44805 44805 1 9606 Homo sapiens 0.07917868038225606 VNNSSLIGVGYTQTLRPGVK Unmodified 2102.1484 0.14840216 62 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;P45880-2;P45880-1;B4DKM5 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 1 5.67 0.471 1 2 53.091 53.167 3 9.2229E-55 15075 20230619_1885_Aki_TMTPro18x_K_F5 275.23 239.93 2768600 2469300 2906900 3512800 2980000 3586900 3707600 3804300 3951000 3728600 4219700 4088600 4515100 3654100 3362300 4034100 3614300 3731600 2562600 2268300 2947100 3461300 3110500 3624500 3703900 3869600 4020800 3783100 4327500 4120700 4542000 3803800 3457000 4029600 3456500 3547000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2029199999.9999998 29547 62 27746 55516;55517;55518 44806;44807 44806 2 9606 Homo sapiens 0.1414138918075878 VNNSTMLGASGDYADFQYLK Oxidation (M) 2208.9997 0.99974859 1228 P28070;A0A140VK46;B4DFL3 PSMB4 Proteasome subunit beta type-4 yes no 0 1 0 7 0 1 60.561 60.604 3 0.025982 18098 20230619_1887_Aki_TMTPro18x_K_F7 44.788 35.13 12535 9454.7 12624 12767 12318 12365 14409 11930 20446 13542 16285 13926 14357 12755 17571 14063 13026 15660 11585 8685.4 12812 12615 12875 12527 14584 12272 20291 13630 16809 14089 14866 13265 17542 14212 12525 14848 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70654000 29548 1228 27747 55519 44808 44808 766 1 9606 Homo sapiens -0.056391295750472636 VNPALAELNLR Unmodified 1208.6877 0.68772099 1206 A0A140VJT8;P13489;A0A024RC87;E9PIM9;E9PMJ3;E9PLZ3;E9PIK5;E9PMA9 RNH1 Ribonuclease inhibitor yes no 0 0 0 8 0 1 55.631 55.693 3 6.662E-05 16008 20230619_1888_Aki_TMTPro18x_K_F8 123.67 88.779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29549 1206 27748 55520 44809 44809 1 9606 Homo sapiens 0.09172463834443079 VNPEREDSETR Unmodified 1330.6113 0.61132116 2953 F2Z2U4;H0Y4W2;Q9Y4A5-2;Q9Y4A5;A0A994J575 TRRAP Transformation/transcription domain-associated protein yes no 0 0 1 1 0 1 28.391 28.391 3 0.00030286 5344 20230619_1880_Aki_TMTPro18x_K_F1 109.24 92.21 7889.6 3648.4 7490.5 11071 16523 15454 10208 13465 11300 7632.5 10700 15256 11675 10382 11424 5454.6 13370 12986 7272.4 3406.1 7795.2 10604 16259 15237 10697 13731 11422 8258.8 11082 14952 11876 10612 11693 6003.6 12771 12255 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20963000 29550 2953 27749 55521 44810 44810 1 9606 Homo sapiens -0.040760045234719655 VNPFRPGDSEPPPAPGAQR Unmodified 1987.9864 0.98642221 3947 Q15942;H0Y2Y8;C9IZ41 ZYX Zyxin yes no 0 0 1 7.5 0.5 1 1 43.421 43.465 3 1.1829E-14 10653 20230619_1887_Aki_TMTPro18x_K_F7 159.8 147.18 70830 57257 60946 85949 74986 94217 108310 110830 124300 108430 88194 78577 119140 78522 73275 122560 81793 86617 65414 52649 63149 84497 77784 94946 107680 111960 124300 108820 93425 81216 118290 83408 76066 120290 78210 82632 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 207710000 29551 3947 27750 55522;55523 44811;44812 44811 2 9606 Homo sapiens 0.03194845218513365 VNPHSLPDPEVNEQSSSK Unmodified 1962.9283 0.9282982 4347 Q99575;Q96F88;E5RK39 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 0 3.5 0.5 1 1 43.613 43.67 3 1.1609E-13 11122 20230619_1883_Aki_TMTPro18x_K_F4 149.73 114.91 80288 61184 73357 77230 66711 80427 71201 71572 86617 105510 111020 104970 107160 95308 83750 106970 117630 111500 74155 56164 75017 76713 70036 80876 72059 74643 88414 104780 112500 106260 108420 99242 87570 107490 112180 105880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 124070000 29552 4347 27751 55524;55525 44813;44814 44814 2 9606 Homo sapiens -0.014648812174300474 VNPIQGLASK Unmodified 1025.5869 0.58694431 3445 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 0 0 0 2.5 0.5 1 1 52.54 52.586 2 4.4341E-07 15286 20230619_1882_Aki_TMTPro18x_K_F3 222.07 168.39 439990 387210 461090 531170 567850 659170 664200 605890 722120 422520 500550 476830 492140 410360 556210 495480 512340 468130 407200 355560 468860 526030 584080 655320 665410 617930 722400 439070 523720 479770 505590 429930 561690 495270 490320 445080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 943290000 29553 3445 27752 55526;55527 44815;44816 44816 2 9606 Homo sapiens 0.07517431851601941 VNPQDGTNTLTR Unmodified 1314.6528 0.65279205 1269 Q9H9B1;A0A1B0GV09;Q9H9B1-3;A0A1B0GU48;A0A0D9SFS4;A0A1B0GUD1;A0A1B0GVZ8;A0A0D9SEQ1;A0A0D9SEP2;A0PJE0;A0A1B0GW79;A0A0D9SFX4;A0A0D9SFG7;A0A0D9SER3;Q9H9B1-4 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes no 0 0 0 5 0 1 38.894 38.986 2 6.5927E-05 9132 20230619_1885_Aki_TMTPro18x_K_F5 125.74 106.1 16326 8926.7 15678 14519 16298 17224 16169 14309 19593 20544 22393 20572 24904 18078 19838 21776 26663 21277 15060 8231.5 15981 14232 16877 17141 16419 14990 19887 20433 22935 20802 25080 18940 20645 21791 25408 20234 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18918000 29554 1269 27753 55528 44817 44817 1 9606 Homo sapiens 0.008051762358491033 VNPTVFFDIAVDGEPLGR Acetyl (Protein N-term) 1987.0051 0.005091963 2036 P62937;A8K486;V9HWF5;B2RE56;B4DM82;F8WE65;C9J5S7;A0A7I2V5J5;A0A7P0S768;E5RIZ5 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 1 0 0 5 0.816 1 1 1 69.577 69.612 2 5.7212E-30 21957 20230619_1885_Aki_TMTPro18x_K_F5 174.9 167.04 0 0 0 0 0 0 675.26 0 0 0 1100.7 0 0 0 0 0 0 0 0 0 0 0 0 0 675.26 0 0 0 1100.7 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 51066000 29555 2036 27754 55529;55530;55531 44818;44819;44820 44819 3 9606 Homo sapiens 0.051069620697035134 VNPTVFFDIAVDGEPLGR Unmodified 1944.9945 0.99452728 2036 P62937;A8K486;V9HWF5;B2RE56;B4DM82;F8WE65;C9J5S7;A0A7I2V5J5;A0A7P0S768;E5RIZ5 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 6.57 0.728 1 5 7 1 70.095 70.135 3 1.9477999999999998E-38 20266 20230619_1887_Aki_TMTPro18x_K_F7 245.97 227.21 73467 58950 54762 69011 65475 69364 77924 66554 77113 71616 69463 65381 70201 68010 73543 79579 83573 82646 67722 54050 57333 68491 67354 70068 77541 67546 78186 71897 71396 66383 71728 70651 75148 79860 79828 78359 10 12 12 10 12 13 11 7 12 13 10 9 11 13 12 12 12 8 464110000 29556 2036 27754 55532;55533;55534;55535;55536;55537;55538;55539;55540;55541;55542;55543;55544;55545 44821;44822;44823;44824;44825;44826;44827;44828;44829;44830;44831;44832;44833;44834;44835;44836;44837 44828 17 9606 Homo sapiens 0.0598297941526198 VNQAIWLLCTGAR Unmodified 1500.7871 0.78711746 300 M0R0F0;A0A024R4Q8;M0R0R2;P46782;Q53G25;M0QZN2 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 0 0 0 6 0.816 1 1 1 62.217 62.261 3 5.3308E-05 18968 20230619_1885_Aki_TMTPro18x_K_F5 111.31 86.096 58031 50290 54783 56497 53404 60318 62021 61599 68751 55384 47957 44805 60892 49248 50373 61544 62240 56211 53654 46089 55914 56621 55830 60742 62237 62672 68822 56016 50729 46154 61243 51323 52120 61318 59394 53468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1162000000 29557 300 27755 55546;55547;55548 44838 44838 1 9606 Homo sapiens 0.056755384569214584 VNQGLIR Unmodified 798.47119 0.47118627 1720 Q15257;Q15257-2;Q15257-3;A0A804CD06;A6PVN5;B4DZF8;F6WIT2;Q15257-4;Q68CR8;B7ZBQ0;B4DLX5;B7ZBP9;H0Y6E5;B4DDQ6;A0A6Q8PH23;B7ZBP7 PPP2R4;DKFZp781M17165 Serine/threonine-protein phosphatase 2A activator yes no 0 0 0 1 0 1 39.506 39.506 2 0.019927 9898 20230619_1880_Aki_TMTPro18x_K_F1 105.27 60.738 79652 55125 84324 79933 106220 104030 97252 100200 131880 57379 69399 68794 66036 58332 99057 52477 83449 63858 73616 50700 85558 78994 108300 103270 99604 101470 129650 60774 74062 68985 69108 60206 99014 53628 79858 60604 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85047000 29558 1720 27756 55549 44839 44839 1 9606 Homo sapiens 0.06388952791417069 VNQIGSVTEAIQACK Unmodified 1616.8192 0.81920545 3418 Q6FHV6;P09104;A8K3B0;P09104-2;F5H0C8 ENO2 Gamma-enolase;Enolase yes no 0 0 0 4.5 3.5 1 1 56.681 56.681 2;3 5.4196E-28 16476 20230619_1888_Aki_TMTPro18x_K_F8 221.8 188.57 76503 78776 106760 100450 68311 76885 75881 76035 77704 101190 113970 135680 107790 103930 105540 125240 107030 133780 71086 72243 105290 99377 74122 79534 76268 78492 80576 101900 115110 135030 110160 109310 107570 125930 102580 126870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1194800000 29559 3418 27757 55550;55551 44840;44841 44841 2 9606 Homo sapiens 0.035468613494003876 VNQIGSVTESLQACK Unmodified 1632.8141 0.81412007 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2;A4QMW8 ENO1 Alpha-enolase;Enolase yes no 0 0 0 5.33 3.09 1 1 1 54.691 54.723 3 8.529599999999999E-19 15606 20230619_1887_Aki_TMTPro18x_K_F7 201.76 0 630380 507540 532400 491130 630540 493410 516150 591840 603000 727820 697550 701710 709720 639960 657680 820070 766910 706200 582090 464680 549820 498040 642900 501970 530230 601110 614080 727100 711790 711540 721810 671370 676610 814400 732300 672180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 7041499999.999999 29560 293 27758 55552;55553;55554 44842;44843;44844 44843 3 9606 Homo sapiens 0.023025574867688192 VNSLGETAER Unmodified 1074.5306 0.53055165 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 37.912 37.971 2 9.6147E-05 8855 20230619_1881_Aki_TMTPro18x_K_F2 167.76 131 252290 162240 239090 246450 315260 321830 280840 296630 402560 300700 352940 359800 383170 321790 324790 255150 398130 361300 232880 149350 245130 242850 320570 319080 288890 304790 400940 305740 365730 361080 387360 329830 334910 263710 379960 342180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 388720000 29561 1022;3868 27759 55555;55556 44845;44846 44845 2 9606 Homo sapiens -0.003732407757297551 VNSSLSDELRR Unmodified 1274.6579 0.65787742 1007 J3QRU8;A0A0C4DGN6;Q59FC3;Q9Y2X7;Q9Y2X7-3;J3QLH1;B4DS81;Q7Z2E5;B4DMF7 GIT1;DKFZp686G1540 ARF GTPase-activating protein GIT1 yes no 0 0 1 5.5 0.5 1 1 40.296 40.387 3 0.00016996 9719 20230619_1886_Aki_TMTPro18x_K_F6 116.41 75.682 57182 46756 54073 59859 73987 69928 62904 68576 85639 68571 74474 67452 71031 61788 63510 67945 83497 76931 52851 42914 55504 59500 74932 69943 64771 70124 85475 69304 76722 68360 72282 64264 65837 68672 79651 72998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69288000 29562 1007 27760 55557;55558 44847 44847 1 9606 Homo sapiens 0.03153480098444561 VNTFSALLLEPYKPPSAQ Unmodified 1974.0462 0.046228496 3263 O43681 ASNA1 ATPase ASNA1 yes yes 0 0 1 2 0 1 64.097 64.105 3 0.089485 20441 20230619_1881_Aki_TMTPro18x_K_F2 39.387 29.012 13075 13163 13462 13647 11445 11665 12840 13423 13104 18091 16227 14760 17939 14364 13590 18469 16528 19750 12110 12049 13611 13727 12074 11998 12886 13715 13486 17921 16562 15126 18042 15059 14086 18549 15807 18733 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4040800 29563 3263 27761 55559 44848 44848 1 9606 Homo sapiens 0.0981672310920203 VNTLIRPDGEK Unmodified 1240.6776 0.67755023 3724 P62750;H7BY10;K7EJV9;K7ERT8;A8MUS3;K7EMA7 RPL23A 60S ribosomal protein L23a yes no 0 0 1 7 0.816 1 1 1 44.485 44.549 3 0.00027647 11135 20230619_1887_Aki_TMTPro18x_K_F7 110.91 75.682 2759500 2312600 2239600 2457400 2510400 3091500 2818800 2799600 3466500 3120400 3198800 3526800 4070500 3183500 2562100 4801700 4034200 3859900 2548100 2118600 2324200 2478800 2599200 3071300 2843700 2888500 3484200 3150000 3333000 3552900 4055000 3380100 2725400 4739500 3844400 3676700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3579599999.9999995 29564 3724 27762 55560;55561;55562 44849;44850 44849 2 9606 Homo sapiens 0.06683856109225417 VNTPTTTVYR Unmodified 1150.5982 0.59823728 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 5.33 3.09 1 1 1 39.718 39.712 2 2.4028E-09 9316 20230619_1888_Aki_TMTPro18x_K_F8 198.61 172.72 167220 137000 141080 132780 150810 171950 157660 150990 191160 152410 162850 140230 150240 120320 174590 177480 167200 138750 154430 125430 145580 135070 156220 170490 159580 155720 191590 153680 167770 142400 154860 127770 176710 175260 159850 132300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 570820000 29565 2326 27763 55563;55564;55565 44851;44852;44853 44853 3 9606 Homo sapiens 0.028962091550738478 VNVADEVQR Unmodified 1028.5251 0.52507234 3551 Q05DK5;P35612-4;P35612-3;P35612;P35612-2;P35612-8;P35612-9 ADD2 Beta-adducin yes no 0 0 0 2.5 0.5 1 1 40.002 40.065 2 9.5557E-05 9625 20230619_1882_Aki_TMTPro18x_K_F3 156.35 115.12 208920 157780 202140 254640 236230 242550 163970 159070 207850 235240 298640 281950 248840 230100 256150 252850 299330 273670 193040 145250 206630 248740 240720 244250 171070 170520 212960 235110 299830 282370 256010 240170 262700 254930 285800 259810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 133410000 29566 3551 27764 55566;55567 44854;44855 44855 2 9606 Homo sapiens 0.011950804324669662 VNVAEVLVNQGAHVDAQTK Unmodified 1991.0436 0.043602734 3033 Q59G01;H0Y9E9;Q12955-7;Q12955-5;Q12955-4;Q12955 ANK3 Ankyrin-3 yes no 0 0 0 7 0 1 56.068 56.126 3 9.331E-11 16234 20230619_1887_Aki_TMTPro18x_K_F7 139.98 119.6 74629 59978 65574 58155 51259 58965 72053 68306 102720 60575 45930 45087 62681 44152 58192 60679 56346 58019 68930 54914 67112 58972 55028 59809 72345 68928 100540 61250 50530 46460 63192 46508 59162 60552 53941 55129 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11785000 29567 3033 27765 55568 44856 44856 1 9606 Homo sapiens 0.08772267704216574 VNVCEHCLVANHAK Unmodified 1649.7766 0.77662913 324 E9PJX1;E9PJ47;B4DHV1;E9PMQ3;E9PQ47;E9PNY1;A0A024R576;O95159 ZFPL1 Zinc finger protein-like 1 yes no 0 0 0 8 0 1 38.352 38.338 4 1.5508E-06 8856 20230619_1888_Aki_TMTPro18x_K_F8 124.39 111.59 41639 32799 35648 41938 42001 45009 43467 38502 49844 47305 49913 51962 56091 44050 42138 57146 61601 52959 38448 30107 36843 41627 43174 45137 43926 40044 50427 47492 51476 52277 56384 46399 44246 56937 58691 50377 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83581000 29568 324 27766 55569 44857 44857 1 9606 Homo sapiens -0.022268122598234186 VNVDPEDLIPK Unmodified 1237.6554 0.65541781 2320 B2RDN4;Q14137;A8K3R2;B4DEN9;Q14137-2;Q4G0D9;Q6DKJ9 BOP1 Ribosome biogenesis protein BOP1 yes no 0 0 0 4.5 0.5 1 1 61.143 61.17 3 0.014634 18797 20230619_1883_Aki_TMTPro18x_K_F4 64.55 43.321 40102 32843 35088 43310 40934 44528 47573 44666 50127 49375 47050 43767 49816 42988 48973 53954 52859 52229 37043 30153 36204 42880 42234 44935 47644 45756 50814 49482 48529 44682 50725 44952 50056 53932 50533 49628 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 165770000 29569 2320 27767 55570;55571 44858 44858 1 9606 Homo sapiens 0.04609631640801126 VNVGAGSHPNK Unmodified 1078.552 0.55195579 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 0 5.33 3.09 1 1 1 33.941 33.966 3 3.9195E-05 7088 20230619_1888_Aki_TMTPro18x_K_F8 134.56 93.135 119650 57644 157970 157780 275060 293670 195210 235420 237730 132330 229720 290430 190370 194180 241020 92610 242800 235960 110650 53672 159040 152630 274180 285050 202840 241620 239040 144200 234860 284040 198160 198040 243440 103250 232250 222620 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 208080000 29570 3484 27768 55572;55573;55574 44859;44860;44861 44861 3 9606 Homo sapiens 0.01582189043665494 VNVPEESR Unmodified 928.46141 0.46140945 4022 Q59EK1;Q5VU08;Q9UEY8-2;Q9UEY8;Q53FL4 ADD3 Gamma-adducin yes no 0 0 0 2 0 1 36.324 36.382 2 0.083594 8265 20230619_1881_Aki_TMTPro18x_K_F2 75.696 42.257 24520 15362 28201 22409 33484 36899 30251 32861 40978 21311 31101 43119 33696 32483 31075 20587 45696 45103 22668 14136 28385 22245 34284 36105 31024 33530 40673 22854 32569 42368 34230 33233 32388 22287 43576 42581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26887000 29571 4022 27769 55575 44862 44862 1 9606 Homo sapiens -0.005682800046088232 VNVPVIGGHAGK Unmodified 1146.6509 0.65094155 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 2.5 0.5 1 1 45.101 45.18 3 5.0921E-07 12164 20230619_1881_Aki_TMTPro18x_K_F2 151.1 129.17 373120 299100 336980 367020 392940 438060 370080 366370 494650 396010 448660 428410 449310 401510 445470 457740 500760 456130 344700 274420 346320 365930 403460 435950 378310 380070 494740 399960 462400 432720 458580 417920 456150 459010 478280 433410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3712299999.9999995 29572 297 27770 55576;55577 44863;44864 44863 2 9606 Homo sapiens 0.0834821200855913 VNVTGIYR Unmodified 920.50797 0.50796571 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;E5RG31;A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 1.5 0.5 1 1 45.557 45.598 2 0.0017531 12373 20230619_1881_Aki_TMTPro18x_K_F2 137.62 100.63 415980 332920 364200 371310 358070 455980 408600 387910 496700 282660 278600 198190 226360 195670 357400 254690 290240 199350 384200 305180 374300 373020 374510 453000 411610 398200 491590 289250 293550 205340 239000 205030 356810 252260 277710 190260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334920000 29573 471 27771 55578;55579 44865 44865 1 9606 Homo sapiens 0.04453204617323081 VNVTVDYIRPASPATETVPAFSER Unmodified 2618.334 0.33403068 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 1 8 0 1 56.672 56.729 3 3.5903000000000003E-75 16424 20230619_1888_Aki_TMTPro18x_K_F8 308.61 285.74 65432 58144 67736 60739 52490 66767 60484 61983 64904 78776 74542 75023 91444 74771 73358 100950 92283 103530 60554 53248 68347 61256 56006 66958 60715 64094 66345 78586 76761 76365 91928 78551 76114 101070 88191 98269 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 599400000 29574 1229 27772 55580 44866 44866 1 9606 Homo sapiens 0.08959702118909263 VNWATTPSSQK Unmodified 1217.6041 0.60405094 2070;2994 O15187;Q2TSD2;A8K5C4;Q01085;Q01085-2;E7ETJ9;A6NKZ9;E7ETC0;B4E0E5;F8W8I6;Q59G98;P31483;C9JTN7;P31483-3;P31483-2;E5RGV5;H7BY49 TIAL1;TIA1 Nucleolysin TIAR;Nucleolysin TIA-1 isoform p40 no no 0 0 0 1.5 0.5 1 1 47.023 47.061 3 0.0011073 13083 20230619_1881_Aki_TMTPro18x_K_F2 89.805 64.419 476860 407700 416170 448630 603090 680410 586150 578180 779920 532530 520770 528020 585640 414790 504240 672510 612760 556720 440600 373590 430910 452770 611770 668110 597530 596280 772690 541060 549320 532790 591490 445440 521080 664640 584850 530200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225280000 29575 2070;2994 27773 55581;55582 44867 44867 1 9606 Homo sapiens 0.003953076667357891 VNYDTTESK Unmodified 1055.4771 0.47711909 33 A0A024QZD5;P08621-2;P08621;A8KAQ5;P08621-3;M0QYR1 SNRP70;SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 0 3.5 0.5 1 1 40.537 40.593 2;3 0.002553 9884 20230619_1882_Aki_TMTPro18x_K_F3 86.898 58.724 31489 21716 38085 32106 40190 47764 35478 38470 44107 34416 42155 50246 42912 43539 45872 38074 54595 45908 29139 19977 38134 31770 41476 46872 36337 39823 44339 35507 43443 50032 43973 44809 47025 38823 52091 43553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35831000 29576 33 27774 55583;55584 44868;44869 44868 2 9606 Homo sapiens -0.048400382782574525 VPADTEVVCAPPTAYIDFAR Unmodified 2191.062 0.061954915 3674 V9HWK1;P60174;P60174-3;Q53HE2 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 5.5 1.12 1 1 1 1 62.218 62.253 3 2.7932E-16 19102 20230619_1886_Aki_TMTPro18x_K_F6 159.26 139.44 2304800 2020300 2240600 2712900 1151900 4069800 677790 4451600 711710 2620600 1805400 3644400 836680 4210200 882660 4578600 934520 2959700 2131600 1854800 2269600 2700000 1293400 4011200 680950 4459600 726730 2771400 1770600 3671000 848810 4323300 921830 4494600 907660 2820900 4 4 4 4 4 4 3 4 3 4 4 4 3 4 4 4 4 4 11825000000 29577 3674 27775 55585;55586;55587;55588 44870;44871;44872 44872 3 9606 Homo sapiens 0.014066415639263141 VPAINVNDSVTK Unmodified 1255.6772 0.67721588 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 0 7.5 0.5 2 2 51.633 51.709 2;3 1.5475E-12 14339 20230619_1887_Aki_TMTPro18x_K_F7 240.82 209.45 320470 241870 279870 288920 267060 324780 299460 303810 344310 396020 444730 415070 447750 367830 378110 476820 435320 426570 295870 221910 287560 288430 279670 325190 301620 314260 352380 395790 451410 419140 453460 386720 389430 474320 415890 405730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3595799999.9999995 29578 1439 27776 55589;55590;55591;55592 44873;44874 44873 2 9606 Homo sapiens 0.05960436389341339 VPALLENQVEER Unmodified 1395.7358 0.73579339 4420 Q9BRS2;Q9H2L9 RIOK1 Serine/threonine-protein kinase RIO1 yes no 0 0 0 3 0 1 54.922 54.968 3 0.078066 16293 20230619_1882_Aki_TMTPro18x_K_F3 39.166 18.194 28770 22707 28267 28340 25515 35982 29562 26481 37876 37108 36652 34311 38319 35162 34670 44521 40520 43481 26593 20839 28725 28252 26906 35569 29828 28000 38071 36872 37717 35008 38907 36730 35698 44500 38733 41299 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24647000 29579 4420 27777 55593 44875 44875 1 9606 Homo sapiens 0.05375492963821671 VPAPFKPITR Unmodified 1124.6706 0.67061436 4616 Q9NX20;E9PI14 MRPL16 39S ribosomal protein L16, mitochondrial yes no 0 0 1 6.5 0.5 1 1 48.176 48.258 3 0.034947 13158 20230619_1886_Aki_TMTPro18x_K_F6 58.474 35.896 234570 189730 177200 234520 227560 241220 255260 233930 247510 243810 231140 235680 257250 209190 243880 269230 237670 255040 216440 174080 185900 233170 233120 243280 255410 239850 252040 245630 239160 238760 261010 219870 248030 268720 227590 242330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144280000 29580 4616 27778 55594;55595 44876 44876 1 9606 Homo sapiens 0.11326588019301198 VPATLQVLQTLPEENYQVLR Unmodified 2310.2583 0.25834654 3810 Q07960;H0YE29;B4DPZ4 ARHGAP1 Rho GTPase-activating protein 1 yes no 0 0 0 1 0 1 63.754 63.754 3 1.5683E-05 20038 20230619_1880_Aki_TMTPro18x_K_F1 93.684 78.368 5899.7 5716.8 5351.7 6119.6 4390.7 5119 5436.4 5444.5 7239.8 5659.9 5169.6 5317.8 6294.1 6668.2 6326.6 8062.5 7535.1 8193.9 5457.3 5235 5472.1 6136.4 4671.3 5262.1 5476.6 5547.9 7187.9 5704 5453.3 5465.3 6402.1 6902.9 6509.3 8081.3 7202.4 7778.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26776000 29581 3810 27779 55596 44877 44877 1 9606 Homo sapiens 0.15562769729331194 VPAVPETLK Unmodified 952.55933 0.55933258 3341 O95036 WUGSC:H_RG054D04.1 yes yes 0 0 0 7.5 0.5 1 1 52.001 52.076 2 0.004846 14500 20230619_1887_Aki_TMTPro18x_K_F7 88.948 54.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29582 3341 27780 55597;55598 44878;44879 44878 2 9606 Homo sapiens 0.08115528591383736 VPDDIYK Unmodified 848.42798 0.42798405 3840 Q59EG8;Q13200;B4DM22;Q9NSM5;Q13200-3;Q13200-2 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 4 0 1 49.321 49.357 2 0.024297 13676 20230619_1883_Aki_TMTPro18x_K_F4 89.55 52.529 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29583 3840 27781 55599 44880 44880 1 9606 Homo sapiens -0.002292817765237487 VPDFSEYR Unmodified 1011.4662 0.46616048 1449 A0A384NPX8;A0A384MTZ1;P47985;P0C7P4 UQCRFS1;UQCRFS1P1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11;Putative cytochrome b-c1 complex subunit Rieske-like protein 1 yes no 0 0 0 4.5 0.5 1 1 51.064 51.118 2 0.0001589 14234 20230619_1885_Aki_TMTPro18x_K_F5 172.15 121.18 505170 403890 448520 564030 496460 641970 618460 623340 711080 581100 572230 573580 677650 544990 524670 661470 601580 654780 466620 371080 461980 557160 516090 642370 619130 636930 713350 589600 598140 581890 680880 569460 541230 662070 575210 621790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 352300000 29584 1449 27782 55600;55601 44881;44882 44882 2 9606 Homo sapiens -0.03911395861860001 VPDFSEYRR Unmodified 1167.5673 0.5672715 1449 A0A384NPX8;A0A384MTZ1;P47985;P0C7P4 UQCRFS1;UQCRFS1P1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11;Putative cytochrome b-c1 complex subunit Rieske-like protein 1 yes no 0 0 1 7.5 0.5 1 1 44.624 44.674 3 0.0010043 11191 20230619_1887_Aki_TMTPro18x_K_F7 100.57 76.964 49705 49137 49357 59055 67020 68214 73701 69662 71898 58822 55993 54610 66735 47233 63655 63342 58636 54483 46018 45041 50501 58941 68322 68330 73826 70779 72704 59912 58681 55409 67556 49852 64502 62904 56123 51858 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115760000 29585 1449 27783 55602;55603 44883 44883 1 9606 Homo sapiens -0.009809441591642099 VPDGKPENEFAFNAEFK Unmodified 1937.9159 0.9159426 3922 Q15181;V9HWB5 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 0 1 6.5 0.5 1 1 57.361 57.425 3 5.0059E-09 16755 20230619_1887_Aki_TMTPro18x_K_F7 126.19 100.6 141030 107310 120510 135160 88223 140710 114030 124100 148190 178230 158120 205510 239470 217000 146330 324780 255290 368060 130190 98499 123760 134250 95346 141380 114620 129380 149670 178080 165540 207910 237630 229180 157480 326410 243990 348710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 306460000 29586 3922 27784 55604;55605 44884;44885 44885 2 9606 Homo sapiens -0.015498728898364789 VPDGMVGFIIGR Oxidation (M) 1275.6645 0.66454271 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 1 0 4.5 3.5 1 1 57.677 57.703 2 0.0025406 17520 20230619_1880_Aki_TMTPro18x_K_F1 89.029 50.376 102410 71761 83629 109900 95205 102480 100560 100510 120860 101360 107970 112690 121610 103280 102870 145090 132090 143630 94467 66040 86843 107670 98172 104110 101700 102880 121430 102780 112000 113660 122830 109060 106780 144910 126180 136400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 130070000 29587 2644;4322 27785 55606;55607 44886;44887 44886 1603 2 9606 Homo sapiens 0.0377370172548126 VPDGMVGFIIGR Unmodified 1259.6696 0.66962808 2644;4322 B4E0X8;A0A384MDX9;A0A994J3Q8;Q96AE4-2;B4DWL1;C9JSZ1;Q96AE4;E9PEB5;A0A1Z1G4M2;B4DT31;Q6PJY1 FUBP1 Far upstream element-binding protein 1 no no 0 0 0 2.67 0.471 1 2 63.194 63.217 2;3 0.00012993 19777 20230619_1882_Aki_TMTPro18x_K_F3 107.18 94.549 250110 200330 244470 270790 241840 306950 288420 270810 333060 317750 298420 322480 367410 313310 273020 389580 384150 418730 231200 183990 249000 268050 253020 306670 289440 280470 335500 318880 310910 326880 368450 327590 286070 391510 366720 397280 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 885950000 29588 2644;4322 27785 55608;55609;55610 44888;44889 44889 2 9606 Homo sapiens 0.05018005588112828 VPDSTYEMIGGLDK Unmodified 1523.7178 0.71776007 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8;Q59GS3;J3QSA9;J3KRP2;J3QQM1;J3QRR3;J3QLH6;J3QRW1;A0A994J6H0;J3QSE0 PSMC5 26S protease regulatory subunit 8 yes no 0 0 0 5 0.816 1 1 1 60.931 60.985 2;3 8.6555E-07 18539 20230619_1886_Aki_TMTPro18x_K_F6 113.76 95.893 127610 108560 120620 155100 114620 160250 144780 147940 168370 167380 162390 168350 179620 152010 163100 180880 170840 190560 117970 99746 123290 152770 120640 161240 144970 152520 169990 168160 167690 170300 181980 158900 166670 181790 163520 180820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 502660000 29589 1202 27786 55611;55612;55613 44890;44891;44892 44892 3 9606 Homo sapiens -0.023150100731982093 VPDSTYEMIGGLDK Oxidation (M) 1539.7127 0.71267469 1202 P62195;A0A140VJS3;P62195-2;A0A994J6V8;Q59GS3;J3QSA9;J3KRP2;J3QQM1;J3QRR3;J3QLH6;J3QRW1;A0A994J6H0;J3QSE0 PSMC5 26S protease regulatory subunit 8 yes no 0 1 0 4.5 0.5 1 1 55.345 55.383 3 0.00093714 15976 20230619_1885_Aki_TMTPro18x_K_F5 77.204 52.822 40780 29265 37820 42576 37994 38827 45964 43637 46188 38031 46762 42783 45049 37999 46832 45382 41779 48688 37657 26913 38697 41845 39635 39651 45888 44118 47020 38886 47863 43092 46104 39750 47307 45677 40070 46184 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71633000 29590 1202 27786 55614;55615 44893 44893 739 1 9606 Homo sapiens -0.035593139358297776 VPDVDIK Unmodified 784.43307 0.43306943 3815 Q09666;Q8N274;A8K171;P48552 AHNAK;NRIP1 Neuroblast differentiation-associated protein AHNAK;Nuclear receptor-interacting protein 1 yes no 0 0 0 4.5 0.5 1 1 50.747 50.8 2 0.05047 14327 20230619_1883_Aki_TMTPro18x_K_F4 89.298 19.031 450770 285050 301030 279620 361320 447090 491470 464220 699780 598520 700330 899870 843410 720700 673270 953750 984610 1041800 415070 261280 319220 285340 375140 439760 494040 476550 700680 607060 725920 893610 848590 761510 706350 958670 939450 988370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 288910000 29591 3815 27787 55616;55617 44894;44895 44894 2 9606 Homo sapiens 0.03223022086081073 VPEANSSWMDTVIR Unmodified 1603.7664 0.7664416 239 P10515;A0A024R3D8;Q86YI5;A0A7P0TBE2;A0A7P0TAX2;A0A7P0TAG1;B4DJX1;A0A7P0TBK2;A0A7P0T997;A0A7P0Z4G4;H0YDD4;E9PEJ4;A0A7P0TA47;B4DS43;Q01991;B4DLQ2 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial;Acetyltransferase component of pyruvate dehydrogenase complex yes no 0 0 0 6.5 0.5 1 1 59.951 60.005 2;3 1.0577999999999999E-28 17800 20230619_1887_Aki_TMTPro18x_K_F7 202.25 179.11 84973 75594 90379 93680 87405 105350 101910 107930 123270 118340 112750 113900 120070 100360 105330 130030 125740 126800 78657 69338 91353 93288 91490 105680 102590 110320 123970 118910 116490 115390 121630 105550 108630 129930 120120 120470 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 66133000 29592 239 27788 55618;55619 44896;44897;44898 44898 3 9606 Homo sapiens -0.011290967134300445 VPEEDLK Unmodified 828.4229 0.42289868 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 2 0.816 1 1 1 45.739 45.792 2 0.015165 12463 20230619_1881_Aki_TMTPro18x_K_F2 111.65 61.624 865290 430850 803680 1005200 1056300 1227400 875390 1039700 1257800 992680 1406200 1629300 1371500 1258600 951250 806270 1720300 1639600 797680 399780 826500 969240 1073800 1218600 905480 1073800 1264400 1025600 1434900 1610800 1382100 1287000 1016100 864780 1638000 1548800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 695170000 29593 4005 27789 55620;55621;55622 44899;44900;44901 44900 3 9606 Homo sapiens 0.001824143608587292 VPEEDLKR Unmodified 984.52401 0.52400971 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 1 3.5 0.5 1 1 39.957 40.007 3 0.010201 9569 20230619_1882_Aki_TMTPro18x_K_F3 79.059 44.127 787440 672850 816340 800400 891110 851690 900920 812810 806910 886060 921810 792530 971010 686450 1040500 739810 908130 741420 728550 617000 827720 798740 918390 856960 905080 835270 832570 888470 942110 805300 991480 715210 1047700 743780 869010 704800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 792530000 29594 4005 27790 55623;55624 44902;44903 44902 2 9606 Homo sapiens 0.031128660635772576 VPEESVLPLVQK Unmodified 1336.7602 0.76021723 2896 S4R3H4;E7EQT4;Q9UKV3-5;Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus no no 0 0 0 6.5 0.5 1 1 60.05 60.103 3 4.5807E-05 18186 20230619_1886_Aki_TMTPro18x_K_F6 118.28 102.65 85835 78418 82164 91669 78933 104800 91425 89383 134770 104570 111080 127660 134030 118720 98756 142580 138560 172880 79399 71880 83803 91652 82809 104600 92775 92812 133820 105670 116150 128250 134480 124030 103490 144440 132420 163750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 161050000 29595 2896 27791 55625;55626 44904;44905 44904 2 9606 Homo sapiens 0.10530753117359382 VPENTMHAMQQK 2 Oxidation (M) 1444.6439 0.64388362 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4 ACTN1 Alpha-actinin-1 yes no 0 2 0 5 0.816 1 1 1 32.446 32.505 3 0.00037936 6509 20230619_1885_Aki_TMTPro18x_K_F5 93.623 75.21 45538 27393 45594 41594 49115 54299 55411 56412 72941 65166 79104 80838 77952 63065 62160 68475 80058 73803 42038 25224 46346 41006 50932 53970 56048 57699 73513 65872 80803 80734 78830 65934 64505 69013 76383 70065 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 37094000 29596 387 27792 55627;55628;55629 44906;44907;44908;44909 44906 249;250 4 9606 Homo sapiens -0.060652567164879656 VPENTMHAMQQK Oxidation (M) 1428.649 0.648969 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4 ACTN1 Alpha-actinin-1 yes no 0 1 0 6 0 1 36.796 36.864 3 0.00013168 8238 20230619_1886_Aki_TMTPro18x_K_F6 101.71 79.48 30710 19473 26691 25050 29112 34872 35253 39071 43577 41485 49315 49278 58017 40849 37782 47233 47610 50277 28326 17893 27483 24981 30254 34598 35453 39659 44139 42027 50677 49394 57914 42791 39370 47506 45476 47711 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97080000 29597 387 27792 55630 44910 44910 249;250 1 9606 Homo sapiens -0.04820952853901872 VPENTMHAMQQK Unmodified 1412.6541 0.65405438 387 P12814;A0A024R694;A0A804HII9;P12814-3;A0A804HK61;A0A804HKE2;P12814-2;P12814-4;A0A804HLF4;A0A804HL31;A0A804HJU8;A0A804HIN7;A0A804HLD0;A0A7I2V4Y4;H9KV75;B7Z565;Q86TX4 ACTN1 Alpha-actinin-1 yes no 0 0 0 7.5 0.5 1 1 42.092 42.131 3 6.6028E-10 10142 20230619_1887_Aki_TMTPro18x_K_F7 159.08 107.24 203820 113180 157060 170640 146500 201660 206250 193070 274330 297550 267220 292020 338970 268550 223750 359920 368280 326390 187730 104260 163440 167940 155150 201200 206510 200600 275540 294970 277650 295870 338230 282670 238250 357920 350680 310510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 226320000 29598 387 27792 55631;55632 44911 44911 1 9606 Homo sapiens -0.03576648991270304 VPEPGVPTETIK Unmodified 1265.6867 0.68671794 3773 Q00534;Q8NI11 CDK6 Cyclin-dependent kinase 6 yes no 0 0 0 4.5 0.5 1 1 51.335 51.386 3 0.0022687 14354 20230619_1885_Aki_TMTPro18x_K_F5 74.611 51.375 160480 138170 147860 183410 144950 178500 140420 163630 208980 186290 189550 205690 229130 178990 170490 273470 229990 252850 148340 126840 151410 181360 150990 180470 144060 168800 208250 187720 197150 207160 229780 190540 178270 271790 219640 240290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 147550000 29599 3773 27793 55633;55634 44912 44912 1 9606 Homo sapiens 0.06450204674888482 VPEVPTAPATDAAPK Unmodified 1462.7668 0.76675917 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;Q1WWK5;K7EJ51 SEPT9 Septin-9 yes no 0 0 0 5.5 0.5 1 1 50.187 50.263 3 0.0010321 13830 20230619_1885_Aki_TMTPro18x_K_F5 73.156 57.267 72950 56994 57763 78471 71368 74841 68337 85198 94667 106250 103640 91892 123750 103350 96057 109970 111600 104660 67319 52361 60260 77402 73030 76190 69933 86826 95407 105810 106680 94366 124330 106600 99092 110080 106580 99490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 458230000 29600 541 27794 55635;55636 44913 44913 1 9606 Homo sapiens 0.053886462780837974 VPEWVDTVK Unmodified 1071.5601 0.56006086 2186 B0ZBD0;Q8WVX7;P39019;M0R2L9;M0QYF7;M0R140 RPS19 40S ribosomal protein S19 yes no 0 0 0 6.25 0.829 1 1 2 58.36 58.417 2;3 0.00047832 17204 20230619_1885_Aki_TMTPro18x_K_F5 106.68 61.546 167240 147410 166620 165440 158070 185170 178240 186270 195950 213130 183500 182310 210940 183900 186370 222160 206140 201720 154710 135080 169190 165930 165490 185790 179160 190870 198320 213000 190060 186540 213300 191660 191230 221400 197010 191830 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1325000000 29601 2186 27795 55637;55638;55639;55640 44914;44915;44916;44917 44914 4 9606 Homo sapiens 0.027143232404114315 VPFCPMVGSEVYSTEIK Unmodified 1941.9216 0.92162161 1442 B5BUB1;A0A384MTR5;Q9Y265;Q9Y265-2;E7ETR0;B3KRS7 RUVBL1 RuvB-like 1 yes no 0 0 0 7.5 0.5 1 1 62.391 62.422 3 0.00029763 18916 20230619_1887_Aki_TMTPro18x_K_F7 78.69 61.408 190040 182590 190780 234450 185510 207250 232300 224920 244080 275540 253450 265300 298160 241600 262180 323480 289160 315000 175920 167500 193950 232110 194340 212050 231880 229980 248600 275360 261660 269020 301110 254400 269070 323080 276590 299180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 685450000 29602 1442 27796 55641;55642 44918;44919 44918 2 9606 Homo sapiens -0.011662336939934903 VPFCPMVGSEVYSTEIK Oxidation (M) 1957.9165 0.91653623 1442 B5BUB1;A0A384MTR5;Q9Y265;Q9Y265-2;E7ETR0;B3KRS7 RUVBL1 RuvB-like 1 yes no 0 1 0 8 0 1 61.107 61.14 3 4.7432E-05 18238 20230619_1888_Aki_TMTPro18x_K_F8 95.347 78.066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29603 1442 27796 55643 44920 44920 935 1 9606 Homo sapiens -0.024105375566250586 VPFLVLECPNLK Unmodified 1427.7847 0.78465784 763 A0A087WUD3;A0A024RDJ1;Q9NRP0;Q9NRP0-2 OSTC;DC2 Oligosaccharyltransferase complex subunit OSTC yes no 0 0 0 2.5 0.5 2 2 63.797 63.817 2;3 5.0783E-07 20046 20230619_1882_Aki_TMTPro18x_K_F3 151.15 125.97 150720 122460 142280 150440 137750 159100 171170 169110 185500 169260 167880 165990 207210 166150 180320 199890 184110 214650 139300 112350 145240 149770 144400 160430 171090 172080 187470 170980 174800 168750 208880 173260 184160 201090 176330 203610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 553350000 29604 763 27797 55644;55645;55646;55647 44921;44922 44922 2 9606 Homo sapiens 0.08787689999235226 VPFSQEIK Unmodified 946.51238 0.51238239 4433 Q9BTU6;E9PAM4;B4DEP8 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha yes no 0 0 0 8 0 1 52.372 52.449 3 0.027634 14590 20230619_1888_Aki_TMTPro18x_K_F8 60.91 19.923 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29605 4433 27798 55648 44923 44923 1 9606 Homo sapiens 0.036986690402500244 VPGAHPQPR Unmodified 957.51445 0.51444807 1796 A0A8Q3SHZ3;O95613-2;O95613;A0A8Q3SHY5 PCNT Pericentrin yes no 0 0 0 8 0 1 28.244 28.27 3 0.0039817 5045 20230619_1888_Aki_TMTPro18x_K_F8 64.42 33.85 15115 35227 19877 19058 22378 25793 21269 20419 16224 19660 29555 32558 21564 23913 30939 15847 40469 30977 14174 32059 19830 20721 22996 25503 21372 21219 17339 20290 29387 32143 22752 24513 31731 16953 38562 29296 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3098500 29606 1796 27799 55649 44924 44924 1 9606 Homo sapiens 0.033991425687077026 VPGEMEIER Oxidation (M) 1074.5016 0.5015597 1285 A0A1K0FUB6;Q8WWM9;K7EMC7 CYGB Cytoglobin yes no 0 1 0 1.5 0.5 1 1 40.561 40.597 2 0.067468 10395 20230619_1880_Aki_TMTPro18x_K_F1 60.892 47.3 354710 290090 328000 322150 326400 321280 365260 365300 461270 393590 354410 317870 459120 321400 301790 512570 425940 368690 327790 265880 335300 322920 340090 326170 368960 370840 460250 394110 372790 326730 457500 341700 317640 503300 405940 351910 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 195100000 29607 1285 27800 55650;55651 44925;44926 44926 813 2 9606 Homo sapiens -0.032711013963762525 VPGEMEIER Unmodified 1058.5066 0.50664508 1285 A0A1K0FUB6;Q8WWM9;K7EMC7 CYGB Cytoglobin yes no 0 0 0 1.5 0.5 1 1 45.556 45.597 2 0.0030373 12381 20230619_1881_Aki_TMTPro18x_K_F2 100.84 81.742 306020 258110 294500 287550 226120 284520 321010 307270 376960 415500 315270 259780 480750 253530 228620 458710 370380 270320 282930 236560 299110 288120 243170 288480 319890 315150 378900 409330 332900 270900 472500 273150 245960 446400 352310 259110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 361650000 29608 1285 27800 55652;55653 44927;44928 44928 2 9606 Homo sapiens -0.020267975337446842 VPGEMEIERR Unmodified 1214.6078 0.60775611 1285 A0A1K0FUB6;Q8WWM9;K7EMC7 CYGB Cytoglobin yes no 0 0 1 3.5 0.5 1 1 40.173 40.222 3 2.8396E-05 9708 20230619_1882_Aki_TMTPro18x_K_F3 134.57 78.308 273470 268950 302030 217510 196800 211520 275070 243300 293480 301700 230430 176700 317160 201910 212970 352100 258600 219770 253410 245750 302330 224360 214690 215400 273450 247920 295690 297990 242740 186280 315600 215620 221670 343570 246720 210290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 221150000 29609 1285 27801 55654;55655 44929 44929 1 9606 Homo sapiens 0.009036541689511068 VPGFADDPTELACR Unmodified 1546.7086 0.70859237 3958 Q1WWL2;Q4QQP8;Q9P2B2;A0A024R0J4;A4QPA1 PTGFRN Prostaglandin F2 receptor negative regulator yes no 0 0 0 4 0 1 56.19 56.198 3 0.0077409 16734 20230619_1883_Aki_TMTPro18x_K_F4 62.287 47.315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29610 3958 27802 55656 44930 44930 1 9606 Homo sapiens -0.04289358638857266 VPGGLQGSQDR Unmodified 1112.5574 0.5574351 3610 Q8NF45;P49750;H0YIQ2;P49750-3;P49750-1 FLJ00353;YLPM1 YLP motif-containing protein 1 yes no 0 0 0 5 0 1 38.177 38.27 2 0.00016374 8813 20230619_1885_Aki_TMTPro18x_K_F5 132.39 81.784 44300 33927 45461 47203 53660 56224 55808 56998 68542 51131 66242 66888 60948 50972 53410 53931 78017 61933 40956 31175 46220 46691 55133 56179 56536 58016 68931 52489 67832 66649 62035 53263 55795 54602 74297 58798 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57458000 29611 3610 27803 55657 44931 44931 1 9606 Homo sapiens 0.0056586783548482344 VPGLPMSDQYVK Unmodified 1332.6748 0.67477304 1855 A0A8V8TQW4;O14617-4;O14617;O14617-5;O14617-2;Q6PK82;O14617-3 AP3D1 AP-3 complex subunit delta-1 yes no 0 0 0 4.5 3.5 1 1 57.822 57.848 3 0.024776 17648 20230619_1880_Aki_TMTPro18x_K_F1 56.205 41.232 72220 66608 77216 79522 63331 85420 80838 88744 92449 84588 86660 89565 94832 78262 96113 102630 93238 101330 66871 61066 77851 79348 67467 85968 80894 90299 93275 85860 89588 90351 96570 82399 97593 102650 89293 96230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166470000 29612 1855 27804 55658;55659 44932;44933 44932 2 9606 Homo sapiens 0.02174264660038716 VPGLYVIDSIVR Unmodified 1329.7656 0.76563696 960;3342 Q0P607;O95104-2;O95104-3;O95104;Q05BU5;B7Z876;B7Z3A4;A0A0A0MT33;Q9UPN6;Q9UPN6-2 SFRS15;SCAF4;RBM16;SCAF8 Splicing factor, arginine/serine-rich 15;Protein SCAF8 no no 0 0 0 2.5 0.5 1 1 64.086 64.105 2 0.00036703 20147 20230619_1882_Aki_TMTPro18x_K_F3 139.38 109.57 77911 64398 76282 83023 69308 82813 75726 86947 92118 90930 84246 89713 105000 79114 83068 107820 99082 114810 72034 59108 77561 82312 72792 83830 76540 88621 92655 91635 87736 90788 105420 83544 85880 108190 94755 108910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133780000 29613 3342;960 27805 55660;55661 44934 44934 1 9606 Homo sapiens 0.11394476699842926 VPGPEAAPR Unmodified 892.47667 0.47666558 4442 Q9BUH6 C9orf142 Protein PAXX yes yes 0 0 0 4.5 0.5 1 1 36.805 36.851 2 0.0044677 8234 20230619_1885_Aki_TMTPro18x_K_F5 90.657 65.734 60088 43602 60139 62953 76127 71548 73604 80718 91356 81223 84604 95771 93402 77480 79387 72389 95690 89165 55523 40091 61333 62095 77663 71916 74914 81809 91793 82497 87571 95861 94381 80283 81824 73803 91353 84536 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45219000 29614 4442 27806 55662;55663 44935;44936 44936 2 9606 Homo sapiens 0.02612631583235725 VPIDGPPIDIGR Unmodified 1247.6874 0.68738664 3435 Q59EZ3;P11717 IGF2R Cation-independent mannose-6-phosphate receptor yes no 0 0 0 5.5 0.5 1 1 56.739 56.806 2 0.00070099 16805 20230619_1886_Aki_TMTPro18x_K_F6 114.86 91.839 30429 24458 26365 34441 34445 34938 30440 31845 33009 43800 43949 46635 47799 39945 37357 48895 54092 48906 28103 22473 27284 33944 35019 35225 31019 33070 33981 43691 44752 46976 48173 41900 39155 48959 51557 46470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116690000 29615 3435 27807 55664;55665 44937 44937 1 9606 Homo sapiens 0.07345044114595112 VPITAVIAAK Unmodified 981.62227 0.62226719 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 3.5 0.5 1 1 58.465 58.481 2;3 1.0382E-06 17817 20230619_1882_Aki_TMTPro18x_K_F3 138.4 118.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29616 1552 27808 55666;55667 44938;44939 44938 2 9606 Homo sapiens 0.13072094379413102 VPITYLELLN Unmodified 1173.6645 0.66452593 828 A0A140VJU5;A0A994J549;A0A087WW40;Q9Y371;Q9Y371-2;Q9Y371-3 SH3GLB1 Endophilin-B1 yes no 0 0 0 7.5 0.5 1 1 66.82 66.841 2 0.00467 20663 20230619_1888_Aki_TMTPro18x_K_F8 91.065 79.901 9489.6 7959 9246.9 6341.5 7684.3 10050 9873.8 10547 14625 12578 12712 14881 13746 12250 12401 17611 13702 20006 8774.3 7275.6 9375 6602.5 8185.7 9895.2 9976.7 10786 14547 12677 13190 14914 13939 13006 12737 17726 13141 18953 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24339000 29617 828 27809 55668;55669 44940 44940 1 9606 Homo sapiens 0.08464024997147135 VPIWDQDIQFLPGSQK Unmodified 1869.9625 0.96249887 2945 E9PS41;Q6RFH5;Q6RFH5-2 WDR74 WD repeat-containing protein 74 yes no 0 0 0 1 0 1 63.669 63.669 3 9.874E-05 19992 20230619_1880_Aki_TMTPro18x_K_F1 93.754 80.877 14185 14284 13141 12772 12751 13898 13661 15401 17894 15786 16537 15510 19249 15115 14781 16457 18847 17293 13127 13060 13427 13055 13308 14015 13859 15633 17933 15929 17137 15750 19342 15684 15341 16559 17983 16422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36733000 29618 2945 27810 55670 44941 44941 1 9606 Homo sapiens 0.06231611732118836 VPLAGEGR Unmodified 797.43955 0.43955179 4470 Q9BYD2;Q5SZR1;A0A1W2PPK1;A0A1W2PRK9;A0A1W2PQB6;A0A1W2PS92;B4DUJ1 MRPL9 39S ribosomal protein L9, mitochondrial yes no 0 0 0 5 0 1 39.277 39.369 2 0.018802 9265 20230619_1885_Aki_TMTPro18x_K_F5 83.364 52.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29619 4470 27811 55671 44942 44942 1 9606 Homo sapiens 0.03272960037475059 VPLEVQEADEAK Unmodified 1326.6667 0.66671078 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;B4DT32 VARS Valine--tRNA ligase yes no 0 0 0 2 0.816 1 1 1 51.342 51.381 2;3 1.8756E-06 15073 20230619_1881_Aki_TMTPro18x_K_F2 150.33 96.358 219710 176170 217620 211720 200510 224830 226680 217340 249270 253310 270230 250680 272660 222620 253720 295280 263050 287410 203120 161600 220940 211130 210360 226210 227820 223550 253530 253990 276250 253810 277220 234460 259090 294990 251760 272980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 285150000 29620 725 27812 55672;55673;55674 44943;44944;44945 44945 3 9606 Homo sapiens 0.016444089442757104 VPLHCVDR Unmodified 994.50183 0.50183448 1900 A0PJK4;B3KTT0;Q8NFH3;Q8TEA6 NUP43 Nucleoporin Nup43 yes no 0 0 0 5.5 0.5 1 1 35.278 35.331 3 0.00029078 7683 20230619_1885_Aki_TMTPro18x_K_F5 127.02 76.895 52386 28980 43770 55331 63901 58257 56892 56580 89753 65388 77196 78770 82379 63124 57642 75252 65696 74166 48276 26782 45537 53690 64582 58640 58751 58166 88997 66074 79981 78831 82690 66289 59596 75319 62839 70424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59567000 29621 1900 27813 55675;55676 44946;44947 44946 2 9606 Homo sapiens 0.004363631141700353 VPLLLEEQGVVDYFLR Unmodified 1889.0299 0.02985015 3468 P17812;A0A3B3IRI2;B4E1E0;A0A8Q3WKZ7;B4DMB5;P17812-2;A0A8Q3WL40;A0A3B3IRQ8;A0A3B3ITF6;A0A3B3ITB8;B7Z9C4 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 7 0 1 67.05 67.073 3 5.6586E-11 20953 20230619_1887_Aki_TMTPro18x_K_F7 125.28 108.62 2490 2276.3 2103.5 3274.6 2366.4 3222.4 3341 2472.3 4203.8 3794.2 2938.3 3131.6 3535 2882.6 3333 4519.8 3159.2 3561.8 2301.2 2091.1 2181.7 3220.5 2470.1 3243.2 3334 2616.3 4184.1 3746.3 3102.2 3201 3579.1 3068 3390.1 4458.3 3027.1 3391.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6622300 29622 3468 27814 55677 44948 44948 1 9606 Homo sapiens 0.12089641943066454 VPLPSLSPTMQAGTIAR Unmodified 1737.9447 0.94474031 239 P10515;A0A024R3D8;Q86YI5;A0A7P0TBE2;A0A7P0TAX2;A0A7P0TAG1;B4DJX1;A0A7P0TBK2;H0YDD4;E9PEJ4;B4DLQ2;A0A7P0Z423;A0A7P0Z459;A0A7P0T9N8;B4E1P6 DLAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial;Acetyltransferase component of pyruvate dehydrogenase complex yes no 0 0 0 5 0 1 60.086 60.138 3 1.8643E-23 17964 20230619_1885_Aki_TMTPro18x_K_F5 197.47 173.63 53017 50374 59205 52857 43257 50421 53642 47485 56185 53204 58317 62158 65877 53628 61690 64353 63010 71136 49121 46124 59348 53189 46470 51128 53590 48908 57172 53744 60100 62408 66776 56185 62893 64868 60331 67464 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144710000 29623 239 27815 55678 44949 44949 1 9606 Homo sapiens 0.10528573205601788 VPLSAYER Unmodified 933.49198 0.4919813 1230 Q9UQ35;A0A140VK53;O60382;I3L3Q8 SRRM2;KIAA0324 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 6 0 1 45.1 45.189 2 0.037447 11770 20230619_1886_Aki_TMTPro18x_K_F6 75.761 21.87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29624 1230 27816 55679 44950 44950 1 9606 Homo sapiens 0.022574983804133808 VPLSEFDFSWSK Unmodified 1440.6925 0.6925316 4606 Q9NVP1;Q4ZG72;Q8N254 DDX18 ATP-dependent RNA helicase DDX18 yes no 0 0 0 8 0 1 63.926 63.949 3 0.00011432 19522 20230619_1888_Aki_TMTPro18x_K_F8 109.24 85.86 36358 23327 32159 32836 22906 28424 30597 32708 35379 32123 35336 23094 35100 37032 30265 34609 25810 27197 33541 21455 32883 32324 24772 29160 30575 33100 35750 32243 36159 24386 35638 37578 30641 34402 24747 25905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191100000 29625 4606 27817 55680 44951 44951 1 9606 Homo sapiens -0.010186968134348717 VPLVAEK Unmodified 754.45889 0.45889025 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4;A0A6Q8PHI7;H7C443;A0A6Q8PFZ6 GARS Glycine--tRNA ligase yes no 0 0 0 6.67 0.471 1 2 49.317 49.399 2;3 0.01721 13320 20230619_1887_Aki_TMTPro18x_K_F7 81.297 50.238 277530 219460 207140 243770 262060 275920 262640 284420 349740 345900 350450 419700 380760 326430 314360 434340 399140 387840 256030 201180 217310 244660 268100 276870 267470 291540 351500 348480 361240 419410 384600 345330 326180 431790 380990 368900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 751740000 29626 3576 27818 55681;55682;55683 44952;44953 44953 2 9606 Homo sapiens 0.07183916328369833 VPLVAPEDLR Unmodified 1107.6288 0.62880913 3222 O14744;O14744-2;B2RDD7;O14744-5;O14744-3;G3V580;G3V5L5;C9JSX3;B4DV00;G3V2X6;H0YJX6 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed;Protein arginine N-methyltransferase 5 yes no 0 0 0 4.5 0.5 1 1 54.638 54.68 2 0.011384 15707 20230619_1885_Aki_TMTPro18x_K_F5 91.069 65.242 73446 51872 70862 76854 81865 98833 85386 84692 98000 94229 105800 103020 105790 81314 98857 106440 99038 113810 67835 47716 72416 75805 84341 97893 86283 87744 99423 94995 108160 103480 107570 85971 100710 106950 94859 107960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58450000 29627 3222 27819 55684;55685 44954 44954 1 9606 Homo sapiens 0.0792998754011478 VPMASCDFSIR Unmodified 1281.5846 0.58457783 792 B7Z6S9;A0A068F579;A0A068F658;A0A0G2JLB3;B2R6A7;D3DV87;B7Z7G9;A0A0G2JNZ5;P04062-4;P04062-2;P04062;A0A068FB60;B7Z6E6;A0A223PQI4;B7Z731;A0A0G2JNZ0;P04062-5 GBA Glucosylceramidase yes no 0 0 0 8 0 1 53.919 53.99 2 0.0070249 15277 20230619_1888_Aki_TMTPro18x_K_F8 81.263 61.502 32104 26523 34224 46138 43254 48737 55392 50538 62398 49499 43116 49666 48782 43532 48303 51486 62922 61124 29703 24433 34816 44969 44536 49090 55310 51492 62379 50109 45451 50181 49631 45539 49947 52138 60050 57960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49321000 29628 792 27820 55686 44955 44955 1 9606 Homo sapiens -0.04495107940010712 VPMLEMTLPGLR 2 Oxidation (M) 1387.7203 0.72034303 2849 D6RIA8;D6RD70;O43704 SULT1B1 Sulfotransferase;Sulfotransferase family cytosolic 1B member 1 yes no 0 2 0 3 0 1 31.683 31.761 3 0.035051 6257 20230619_1882_Aki_TMTPro18x_K_F3 45.653 16.325 20042 18605 18819 19248 19844 21954 19900 17672 26091 18293 21856 19475 18285 17139 24199 17960 24300 20190 18538 17034 19235 19428 20546 21907 20248 18378 26028 18513 22461 19645 19070 17796 24472 18182 23221 19168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28180000 29629 2849 27821 55687 44956 44956 1700;1701 1 9606 Homo sapiens 0.04199166850821712 VPMSVVNFEK Unmodified 1148.59 0.58998078 4470 Q9BYD2;Q5SZR1 MRPL9 39S ribosomal protein L9, mitochondrial yes no 0 0 0 1 0 1 58.999 58.999 3 0.00013566 18082 20230619_1880_Aki_TMTPro18x_K_F1 116.52 84.103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29630 4470 27822 55688 44957 44957 1 9606 Homo sapiens 0.021629389141025968 VPNLPSFK Unmodified 900.5069 0.50690308 2209 B2R4I8;Q92572 AP3S1 AP-3 complex subunit sigma-1 yes no 0 0 0 3 0 1 56.993 57.026 3 0.034564 17202 20230619_1882_Aki_TMTPro18x_K_F3 62.2 45.568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29631 2209 27823 55689 44958 44958 1 9606 Homo sapiens 0.05266990248424008 VPNPSLK Unmodified 753.43849 0.43848916 535 I3L2L5;A0A024R8R5;I3L317;I3L4Q0;C9JLW8 FAM195B;hCG_1818442 Protein FAM195B yes no 0 0 0 1 0 1 45.098 45.098 2 0.013493 12308 20230619_1880_Aki_TMTPro18x_K_F1 113.89 53.531 76186 53070 70509 71630 76594 79408 75546 74707 100410 75343 83471 73520 79165 66509 72681 67002 94437 73922 70338 48768 72184 70910 79066 79602 76997 76666 100130 76117 86170 74496 80649 68885 75178 67740 90005 70213 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84635000 29632 535 27824 55690 44959 44959 1 9606 Homo sapiens 0.05190745668562613 VPNSNPPEYEFFWGLR Unmodified 1950.9264 0.92644771 599 Q9UNF1;A0A024R9Y7;Q5H907;Q5H909;Q9UNF1-2;B4DX55 MAGED2 Melanoma-associated antigen D2 yes no 0 0 0 8 0 1 63.796 63.819 3 2.3687E-06 19456 20230619_1888_Aki_TMTPro18x_K_F8 117.08 113.89 13526 11343 12100 12754 11997 15332 18848 12413 18980 22219 23849 25835 26212 23750 22392 27717 18851 21859 12498 10397 12422 12799 12667 15242 18592 13164 19530 22043 24356 25987 26495 24756 22673 27452 18091 20813 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62049000 29633 599 27825 55691 44960 44960 1 9606 Homo sapiens -0.010978454447695185 VPPAINQFTQALDR Unmodified 1568.8311 0.83109076 3722 P62424;Q5T8U3 RPL7A 60S ribosomal protein L7a yes no 0 0 0 1.5 0.5 2 2 61.998 62.003 2;3 4.1017E-22 19284 20230619_1880_Aki_TMTPro18x_K_F1 223.36 197.88 391120 301190 308440 368420 276380 406800 363480 367950 418510 430060 392920 379020 511360 395150 318190 591850 494910 514550 360890 276370 320220 366960 293030 407300 363160 380210 422470 429840 409200 388090 508900 417620 338230 586360 471950 489470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3114899999.9999995 29634 3722 27826 55692;55693;55694;55695 44961;44962 44961 2 9606 Homo sapiens 0.06942846154902327 VPPIKPNAGEESVMNLDK Unmodified 1936.9928 0.99281272 21 A0A024QZ30;P31040;P31040-2;D6RFM5;B3KT34;Q0QF12;P31040-3;B3KYA5;B4DYN5;H0Y8X1 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 1 7 0 1 54.857 54.921 3 0.089336 15707 20230619_1887_Aki_TMTPro18x_K_F7 46.131 38.351 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29635 21 27827 55696 44963 44963 1 9606 Homo sapiens 0.061796023349870666 VPPPPPIAR Unmodified 942.56509 0.56508666 2226 P07910-2;G3V4W0;B4DY08;B2R5W2;G3V4C1;B3KX96;A8K9A4;P07910;B2R603;G3V2Q1;G3V576;P07910-4;D3DPI2;G3V2D6;G3V575;G3V555;B4DQQ2;P07910-3;G3V5V7 HNRNPC;hCG_1641229 Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 0 3.67 3.09 1 1 1 43.999 44.033 2 0.038285 11641 20230619_1881_Aki_TMTPro18x_K_F2 69.176 45.652 1170300 946730 1049800 1109600 1209600 1415000 1319300 1162100 1454500 1308200 1344900 1324000 1557200 1137100 1306500 1638100 1590300 1404300 1081100 868200 1079400 1111100 1247700 1401800 1327500 1208900 1469700 1315300 1394100 1337800 1569700 1206100 1350300 1624000 1517600 1337000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3145999999.9999995 29636 2226 27828 55697;55698;55699 44964;44965;44966 44965 3 9606 Homo sapiens 0.09150671893701201 VPPPWLIAMQR Unmodified 1306.722 0.72199801 3850 Q13435;E9PPJ0;Q7Z3K9;H0YEX5 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 0 6 0 1 62.71 62.762 3 5.785E-09 19317 20230619_1886_Aki_TMTPro18x_K_F6 153.05 123.96 44073 37041 41611 43900 33936 46955 43762 42012 53541 45224 42836 42731 41842 39433 38331 48088 46345 55215 40741 33968 42385 43814 36216 47117 43857 43358 53540 45483 44407 43386 42610 41244 39540 48550 44326 52335 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98836000 29637 3850 27829 55700 44967 44967 1 9606 Homo sapiens 0.08090588721711356 VPPVPDYVAHPER Unmodified 1474.7569 0.75686319 716 A0A024RCB9;Q9Y5U2-2;Q9Y5U2;A6NCC9;E9PME3;C9JHT9;C9JJV1 TSSC4 Protein TSSC4 yes no 0 0 0 5 0 1 45.805 45.882 3 5.4961E-06 12030 20230619_1885_Aki_TMTPro18x_K_F5 107.14 96.482 38891 29322 36798 38199 46320 53042 48208 44841 63743 40269 47275 47833 50897 37491 45553 55356 56319 51373 35927 26926 37715 38033 47455 52307 48944 46257 63321 41226 49437 47904 51559 39972 47061 55085 53748 48855 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63141000 29638 716 27830 55701 44968 44968 1 9606 Homo sapiens 0.038475030633662755 VPPVQVSPLIK Unmodified 1175.7278 0.72779489 3666 P56385 ATP5I ATP synthase subunit e, mitochondrial yes yes 0 0 0 3 0 1 58.607 58.638 3 0.0043889 17855 20230619_1882_Aki_TMTPro18x_K_F3 82.417 58.081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29639 3666 27831 55702 44969 44969 1 9606 Homo sapiens 0.14696010505031154 VPQIEVETHK Unmodified 1178.6295 0.62953741 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5 0.816 1 1 1 45.506 45.575 3 0.0001998 11858 20230619_1885_Aki_TMTPro18x_K_F5 118.48 94.101 121120 92150 103340 108050 108490 123240 126680 119770 158390 139930 155850 146160 148000 119870 145370 163590 150490 156960 111810 84527 106570 108040 112890 123400 127630 123140 159370 140570 159610 147290 151140 126840 148260 163260 143980 149130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 548720000 29640 3881 27832 55703;55704;55705 44970 44970 1 9606 Homo sapiens 0.04736782189161204 VPQVSTPTLVEVSR Unmodified 1510.8355 0.83550744 2776 CON__P02769;B4DPR2;P02768;B4DPP6;H0YA55;CON__P02768-1;F6KPG5;A0A0C4DGB6;A8K9P0;B2RBS8;Q56G89;P02768-2;C9JKR2;D6RHD5;B7WNR0;P02768-3;A0A087WWT3 ALB Serum albumin yes no 0 0 0 8 0 1 54.226 54.298 2 0.00012236 15352 20230619_1888_Aki_TMTPro18x_K_F8 137.6 101.01 + 25993 50941 58701 30721 125420 201880 78898 91290 196040 63678 62372 103710 50584 60658 46466 89218 122140 216460 24495 46394 57836 34924 124430 188450 85716 99959 187360 67436 69984 101910 52114 65620 51768 96084 116780 203900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 525560000 29641 2776 27833 55706 44971 44971 1 9606 Homo sapiens 0.10052310577771095 VPSALAPASQEPSPAASAEADGK Unmodified 2150.0491 0.049141622 3212;3213 O00429-6;O00429;D3DUW5;F8VUJ9;A0A8V8TQT5;A0A994J696;O00429-7;O00429-2;O00429-8;F8VZ52;A0A994J6L8;A0A994J3M8 DNM1L Dynamin-1-like protein no no 0 0 0 3.5 0.5 1 1 51.466 51.513 3 0.0058135 14708 20230619_1883_Aki_TMTPro18x_K_F4 60.133 51.341 43383 31490 42181 61695 41559 48895 43695 48848 59995 46647 50510 53817 58661 44354 51483 54787 56114 67331 40078 29075 43056 59572 43330 50358 44452 49878 59784 47500 52643 53993 59239 46661 52754 55573 53722 63778 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122960000 29642 3212;3213 27834 55707;55708 44972 44972 1 9606 Homo sapiens 0.02011901705418495 VPSENVLGEVGSGFK Unmodified 1517.7726 0.77257283 2373 B3KPA6;B4DEA8;P49748-2;P49748;P49748-3;Q53HR2;B3KPX1;A0A077H1I5 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 6.5 0.5 1 1 60.571 60.621 3 0.00098402 18073 20230619_1887_Aki_TMTPro18x_K_F7 74.301 66.71 51975 48966 53761 60791 62745 67529 78494 70582 73555 70148 73137 71345 75588 64982 73653 76961 72802 78313 48119 44906 54660 60509 64827 67846 78041 71900 75190 70952 75175 72181 76975 67876 74903 77216 69703 74348 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137070000 29643 2373 27835 55709;55710 44973 44973 1 9606 Homo sapiens 0.03439744789716315 VPSEYTYR Unmodified 1013.4818 0.48181054 3214 O00451;O00451-2;O00451-3;E5RGR6 GFRA2 GDNF family receptor alpha-2 yes no 0 0 0 6 0 1 42.143 42.238 2 0.00031439 10444 20230619_1886_Aki_TMTPro18x_K_F6 130.22 107.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29644 3214 27836 55711 44974 44974 1 9606 Homo sapiens -0.024391093448230095 VPSFETAEGIGAELK Unmodified 1546.7879 0.78788854 596 B2R745;A0A024R9W8 SLC30A9 yes no 0 0 0 6 0 1 61.774 61.829 3 0.0059936 18909 20230619_1886_Aki_TMTPro18x_K_F6 60.861 44.483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29645 596 27837 55712 44975 44975 1 9606 Homo sapiens 0.03636611586944127 VPSGQNADVQK Unmodified 1141.5728 0.57275081 2895 E7EQ69;Q9GZZ1;C9J5D1;Q9GZZ1-2;B0AZT5;C9J5J3;A0A0D9SF32 NAA50 N-alpha-acetyltransferase 50 yes no 0 0 0 5 0 1 39.732 39.822 2 0.014857 9438 20230619_1885_Aki_TMTPro18x_K_F5 89.247 59.263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29646 2895 27838 55713 44976 44976 1 9606 Homo sapiens 0.0076273463266716135 VPSLVGSFIR Unmodified 1073.6233 0.62332982 2269 V9HWG9;B2R983;P78417;Q5TA02;P78417-3 HEL-S-21;GSTO1 Glutathione S-transferase omega-1 yes no 0 0 0 5.5 0.5 1 1 61.998 62.048 2 1.0978E-05 18996 20230619_1886_Aki_TMTPro18x_K_F6 165.15 127.59 545950 452060 461980 466130 500730 687930 595240 596250 698670 331020 296450 241410 256120 218470 461200 288980 279650 206640 504220 414050 477130 472690 520980 676400 597510 608150 688670 346770 321420 248760 272470 229790 454370 285260 268820 197410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 574940000 29647 2269 27839 55714;55715 44977;44978 44978 2 9606 Homo sapiens 0.08946308748318188 VPSSTVEYLK Unmodified 1121.5968 0.5968403 2940 E9PNP3;Q9H7C9;E9PR47 AAMDC Mth938 domain-containing protein yes no 0 0 0 7 0 1 52.361 52.435 2 0.00021622 14661 20230619_1887_Aki_TMTPro18x_K_F7 137.05 93.799 164630 124110 143620 168110 174380 209980 184990 173680 208640 199820 216550 229060 226470 195380 182100 246080 260590 258680 151990 114020 148290 166610 179180 208240 186590 180680 211530 201490 222280 230090 228820 205320 190630 246980 248560 245570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 70556000 29648 2940 27840 55716 44979;44980 44979 2 9606 Homo sapiens 0.040905750663114304 VPSTEAEALASSLMGLFEK Unmodified 1978.9921 0.99214402 2533 Q6IAT1;B4DLV7;P50395;Q5SX87;Q5SX86;V9GYF8;Q5SX90 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 0 7.5 0.5 1 1 67.839 67.859 3 0.00013481 21071 20230619_1888_Aki_TMTPro18x_K_F8 75.548 62.43 8688.3 5835.4 7824.5 7057.2 5392.7 6297.9 8155.7 8087.9 5347.3 7329.3 8224.2 9238.5 10057 7003.9 8883.9 8937.5 7964.5 9516 8018.2 5357.2 7979.6 7022.8 5864.3 6466.7 7983.5 8120.7 5727.9 7495.6 8392.7 9216 10136 7407.2 9004.3 8982.6 7640 9026.5 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4350100 29649 2533 27841 55717;55718 44981;44982 44982 2 9606 Homo sapiens 0.041807628952483356 VPSTEAEALASSLMGLFEK Oxidation (M) 1994.9871 0.98705864 2533 Q6IAT1;B4DLV7;P50395;Q5SX87;Q5SX86;V9GYF8;Q5SX90 GDI2 Rab GDP dissociation inhibitor beta yes no 0 1 0 8 0 2 66.079 66.098 3;4 2.9526E-20 20394 20230619_1888_Aki_TMTPro18x_K_F8 190.24 172.32 81190 60776 69634 85697 85760 79606 75908 82779 76864 78651 99899 95321 84889 71251 85399 106630 81373 103590 74946 55860 72007 84381 87441 81055 77192 84255 79160 80175 100730 95285 87111 76145 86742 106340 78050 98343 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 73220000 29650 2533 27841 55719;55720 44983;44984;44985 44984 1543 3 9606 Homo sapiens 0.029364590326395046 VPSTETEALASNLMGMFEK Unmodified 2053.97 0.97002836 1080 A0A0S2Z3X8;P31150;B4DH24 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 7.5 0.5 1 1 65.743 65.765 3 1.435E-24 20239 20230619_1888_Aki_TMTPro18x_K_F8 197.1 180.41 72661 66917 76928 85495 47067 63189 68023 61717 67440 89170 85888 93294 92875 80689 80958 90991 100150 111320 67273 61391 77399 84515 51875 65544 67411 63964 69563 88730 87610 94038 94021 84224 83649 92376 95711 105480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 268530000 29651 1080 27842 55721;55722 44986;44987 44987 2 9606 Homo sapiens -0.01479784844786991 VPTANVSVVDLTCR Unmodified 1529.7872 0.78717704 3382;4086 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q0QET7;A4UCT1;Q5ZEY3 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 4.4 2.73 1 1 1 1 1 55.223 55.255 2;3 8.8589E-47 16492 20230619_1880_Aki_TMTPro18x_K_F1 244.71 217.62 1125100 913020 951640 997180 843620 991210 1122100 1110300 1141300 1280800 1149400 1220400 1139800 1067200 806650 1300400 836660 1376400 1039000 836740 979930 1000700 892980 1005700 1116000 1130600 1162700 1282900 1178600 1236100 1148300 1118000 830820 1305700 803960 1304500 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 44987000000 29652 3382;4086 27843 55723;55724;55725;55726;55727 44988;44989;44990;44991;44992 44988 5 9606 Homo sapiens 0.04347493666250557 VPTANVSVVDLTCRLEK Unmodified 1900.0088 0.0087971324 3382;4086 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q0QET7;A4UCT1;Q5ZEY3 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 1 2 0 1 58.34 58.354 3 2.2364E-23 17953 20230619_1881_Aki_TMTPro18x_K_F2 199.91 170.95 150720 297170 190560 115830 161110 86397 134560 178750 99927 213200 158140 141520 258070 188390 207220 420460 317870 297090 140900 270180 189200 132400 168030 92594 136520 176910 106820 211130 163810 149150 257750 205090 218890 411120 302920 283560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23196000 29653 3382;4086 27844 55728 44993 44993 1 9606 Homo sapiens 0.09479308571894762 VPTHVPVCVLGNYR Unmodified 1609.8399 0.83988131 3969 Q3YEC7;Q3YEC7-2;B3KXX7;F2Z2T0;Q3YEC7-3;Q9NWD6;Q3YEC7-4;Q3YEC7-5;Q3YEC7-6;G3V154;B3KSV0;Q9NW45;H0Y7H6 RABL6 Rab-like protein 6 yes no 0 0 0 4 0 1 50.102 50.137 3 6.3612E-07 14045 20230619_1883_Aki_TMTPro18x_K_F4 108.59 87.037 79009 63591 70959 61604 59481 82449 84354 68417 101530 70066 62065 60136 76156 52700 80346 75128 75747 69745 72988 58221 72555 62709 63530 81462 84075 70935 100800 70509 66172 61271 77412 55855 81339 74851 72477 66323 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254720000 29654 3969 27845 55729 44994 44994 1 9606 Homo sapiens 0.05935496519714434 VPTISINK Unmodified 870.51747 0.51746776 2327 B2RDY9;D3DPU2;B4DNW7;Q01518;B4DI38;Q01518-2;B4DNY3;B4DNA3;B4DUZ8;E9PDI2;B7Z4M3;B7Z385;Q5JPJ8;P40123-2;P40123-3;P40123 CAP1;CAP2;DKFZp686D0714 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein 2 yes no 0 0 0 2.5 0.5 1 1 52.41 52.459 2 0.00014084 15208 20230619_1882_Aki_TMTPro18x_K_F3 174.69 101.36 276740 223270 231910 257350 293190 317150 297760 285890 340250 330890 330550 340300 372250 292680 288950 386820 371340 346710 255530 204720 240390 257890 299910 315520 301200 295410 343960 332330 341410 343480 374550 308500 300370 384670 354330 329820 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 492480000 29655 2327 27846 55730;55731 44995;44996 44996 2 9606 Homo sapiens 0.07702972902859528 VPTTEKPTVTVNFR Unmodified 1587.8621 0.86205654 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;C9JF13;C9J6B6;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7;C9K073 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 1 2.5 0.5 1 1 49.036 49.107 3 6.1353E-05 13713 20230619_1882_Aki_TMTPro18x_K_F3 89.911 76.165 702680 580490 602450 642830 607700 669690 722260 739860 757520 842430 666420 666900 906250 675050 587740 846600 790260 721970 649020 532010 620680 644760 634040 676970 722730 753480 767160 840340 698250 685240 901720 705600 615810 840300 753680 687300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1978599999.9999998 29656 1676;2901 27847 55732;55733 44997;44998 44998 2 9606 Homo sapiens 0.09163999469137707 VPTTLMPVNTVALK Oxidation (M) 1498.8429 0.842901 4167 Q7Z434-4;Q7Z434 MAVS Mitochondrial antiviral-signaling protein yes no 0 1 0 3 0 1 57.847 57.877 3 0.00059666 17554 20230619_1882_Aki_TMTPro18x_K_F3 84.753 68.122 48893 39712 42730 50340 46207 49636 48602 47412 55746 43687 40837 41120 38872 33362 47299 41971 39191 50491 45161 36446 44014 49945 47796 50198 49078 48507 55769 44292 42540 41595 40136 35144 47477 42528 37654 47825 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9018900 29657 4167 27848 55734 44999 44999 2683 1 9606 Homo sapiens 0.11343326853852886 VPVDEFDGK Unmodified 1004.4815 0.48147619 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;A0A7I2YQ77;A0A087WZ71;Q92499-3;A0A087X2G1 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 2.5 0.5 1 1 52.183 52.236 2 0.00082271 15421 20230619_1881_Aki_TMTPro18x_K_F2 122.13 80.026 143330 95980 126080 146040 133010 163990 158190 153790 206880 157790 171960 211800 216540 181420 161070 256990 238480 275620 132250 88339 129770 143520 138540 164110 159480 157980 206480 161010 180240 211600 217050 192140 169580 257750 227680 261460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 242050000 29658 1661 27849 55735;55736 45000;45001 45000 2 9606 Homo sapiens -0.020585290646636167 VPVDVAYR Unmodified 917.49707 0.49706667 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0;A0A075B730;P58107 PLEC;PLEC1;EPPK1 Plectin;Epiplakin yes no 0 0 0 6 0 1 46.265 46.349 2 0.022051 12290 20230619_1886_Aki_TMTPro18x_K_F6 98.418 83.636 70802 53617 69230 69930 83072 88227 98523 100060 116670 110300 100830 102060 118700 88486 87645 118210 181730 106370 65426 49235 70688 69540 85593 88090 98965 101620 117230 110670 104960 103530 119150 93346 94989 117560 172450 101430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98149000 29659 3921 27850 55737 45002 45002 1 9606 Homo sapiens 0.035018022430335805 VPVFRPMDLMVEASPR Unmodified 1842.9484 0.94844548 1204 A0A140VJT0;P63151;P63151-2;A0A590UJY3 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform yes no 0 0 1 3 0 1 61.691 61.72 3 2.2945E-26 19103 20230619_1882_Aki_TMTPro18x_K_F3 195.46 178.46 192250 166590 191970 189340 158600 190080 189470 188130 204070 231200 217800 226450 234760 210070 232840 240730 246760 265160 177840 152690 194520 189440 168320 192130 189800 193500 207790 231160 223670 229490 239040 218870 237620 242770 236090 251520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 242320000 29660 1204 27851 55738 45003;45004 45004 2 9606 Homo sapiens 0.0606891970783181 VPVGDQPK Unmodified 838.45487 0.45486751 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;H0YI79;A0A994J6A0;A0A994J3G1;F8W1W3;B4DDQ3;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 0 5 0 1 41.142 41.23 2 0.0055228 10040 20230619_1885_Aki_TMTPro18x_K_F5 113.5 82.781 45649 31442 60294 73643 88602 101380 74388 84922 84559 56785 95648 93432 73037 72602 84061 47527 90042 86266 42281 29127 60546 71145 89406 99923 76172 87122 85854 60053 96625 92466 75845 74235 85406 50464 86068 81539 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28717000 29661 3212;3213 27852 55739 45005 45005 1 9606 Homo sapiens 0.02917826834675452 VPVGDQPPDIEYQIK Unmodified 1696.8672 0.8672015 3619 P50570-3;P50570-2;P50570-5;P50570-4;P50570;Q59G96 DNM2 Dynamin-2 yes no 0 0 0 5.5 0.5 1 1 57.588 57.652 3 0.010287 16986 20230619_1885_Aki_TMTPro18x_K_F5 64.52 45.445 89065 78834 84277 96705 84824 92760 95882 97318 112190 107300 115410 112860 124950 101620 109250 135820 128590 147680 82361 72304 86093 96144 88380 94216 96556 99388 113490 108080 118650 114010 126460 107050 112590 136500 122980 140070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 378780000 29662 3619 27853 55740;55741 45006 45006 1 9606 Homo sapiens 0.046642585410836546 VPVHDVTDASK Unmodified 1166.5932 0.5931519 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 0 0 4 0 1 40.499 40.541 2 5.2019E-05 9785 20230619_1883_Aki_TMTPro18x_K_F4 159.4 129.93 34059 27280 29201 29339 47732 45662 41105 37905 46479 37914 49111 47355 38976 35399 39487 31461 41901 40012 31452 24999 30341 29681 47895 44783 41977 39256 47112 38621 49808 47223 40136 36696 40232 32192 40054 37920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26250000 29663 3484 27854 55742 45007 45007 1 9606 Homo sapiens 0.016519052924422795 VPVLVEK Unmodified 782.49019 0.49019038 2217 B2R5J1 yes yes 0 0 0 7.5 0.5 1 1 51.712 51.787 2 0.032197 14394 20230619_1887_Aki_TMTPro18x_K_F7 94.262 0 114150 85318 108400 119850 108540 118450 114510 116740 139870 145510 151420 154760 162180 131910 134680 165390 166340 159630 105450 78414 110660 118150 112930 119830 115940 120160 141570 145790 155280 155920 163850 138610 139350 165260 158800 151710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208100000 29664 2217 27855 55743;55744 45008 45008 1 9606 Homo sapiens 0.09024489362468557 VPVNLLR Unmodified 809.51232 0.51232281 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3.5 0.5 1 1 51.736 51.802 2 0.024398 14965 20230619_1882_Aki_TMTPro18x_K_F3 99.279 47.591 181980 161460 170190 193980 174680 194830 200590 197470 222760 243440 251910 275610 279520 228480 250100 298760 281770 296320 168270 148050 174080 193250 181830 197030 201470 202820 226970 244480 258460 276720 282960 240970 256860 298810 269390 281420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86693000 29665 3881 27856 55745;55746 45009;45010 45009 2 9606 Homo sapiens 0.09994713830906221 VPVPDER Unmodified 810.42357 0.42356738 3129 J3KQ32;Q9NTK5;B4DK14;Q9NTK5-3;C9JTK6;Q53SW9 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 0 2.5 0.5 1 1 39.493 39.555 2 0.0092557 9587 20230619_1881_Aki_TMTPro18x_K_F2 119.57 65.041 308630 181960 283550 315340 301060 364590 318070 271670 436100 298920 338860 399810 415400 305090 288850 293640 475310 407000 284690 167870 290610 307820 312310 362530 323190 284960 433310 304090 355830 397730 415420 317560 306190 301620 452500 385620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 503980000 29666 3129 27857 55747;55748 45011 45011 1 9606 Homo sapiens 0.010772538005653587 VPVPDERFDFLCQYHK Unmodified 2048.9778 0.97783136 3129 J3KQ32;Q9NTK5;B4DK14;Q9NTK5-3;C9JTK6;Q53SW9 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 1 8 0 1 57.669 57.721 4 5.7184E-08 16849 20230619_1888_Aki_TMTPro18x_K_F8 135.27 119.51 107340 99775 101140 99306 79611 83239 88307 96600 91147 109420 104940 101740 122290 102820 86148 156570 128360 117900 99292 91323 102900 100220 84601 85784 88728 98106 93362 109610 107720 103800 122580 108820 90956 154090 122330 112430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 458090000 29667 3129 27858 55749 45012 45012 1 9606 Homo sapiens -0.004698447423379548 VPVPEDK Unmodified 782.41742 0.41741937 3323 O75947;A0PJH2 ATP5H ATP synthase subunit d, mitochondrial yes no 0 0 0 3.5 0.5 1 1 44.616 44.675 2 0.05224 11538 20230619_1883_Aki_TMTPro18x_K_F4 89.55 40.191 327330 210380 331770 341740 400730 458160 377690 410660 454930 396960 512200 595450 506730 467690 453070 358790 581170 579290 302300 193830 337770 335650 410380 453100 384700 422360 461090 408020 523090 590580 515100 480920 468160 375020 554800 547890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 223450000 29668 3323 27859 55750;55751 45013 45013 1 9606 Homo sapiens 0.017507355690440818 VPVTYLELLS Unmodified 1132.638 0.63797683 505 B7ZC39;A0A024R896;B7ZC38;Q9NR46;Q9NR46-2;Q71RA6 SH3GLB2 Endophilin-B2 yes no 0 0 0 7.5 0.5 1 1 66.819 66.84 2 0.048211 20859 20230619_1887_Aki_TMTPro18x_K_F7 66.258 37.745 14241 10485 12811 14333 9758.5 11705 13456 15455 13726 16011 16840 17798 17444 16286 17560 19145 22056 21017 13149 9633.8 13097 14125 10485 12116 13374 15543 14099 16195 17168 17938 17805 16996 18110 19293 21052 19946 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19749000 29669 505 27860 55752;55753 45014;45015 45014 2 9606 Homo sapiens 0.07696336105800583 VPVVFVTNAGNILQHSK Unmodified 1822.0101 0.010117761 4466 Q9BXW7-2;Q9BXW7 CECR5 Cat eye syndrome critical region protein 5 yes no 0 0 0 5.5 0.5 1 1 61.589 61.637 3 1.9616E-40 18818 20230619_1886_Aki_TMTPro18x_K_F6 238.83 220.05 157010 130140 148960 162360 140870 146580 146870 146300 184070 182230 165370 160170 159990 141080 173590 193520 170220 198100 145140 119400 151920 161120 147130 149460 148930 150480 184750 181590 170320 162980 164150 148950 176220 193810 163100 188000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141910000 29670 4466 27861 55754;55755 45016;45017 45017 2 9606 Homo sapiens 0.13199310722984592 VQAAEHTLR Unmodified 1023.5461 0.54614213 1730 E7EQ61;A0A804HJ86;Q9GZZ9;E7EWE1;Q9GZZ9-2;C9J5W5;C9JRV9 UBA5 Ubiquitin-like modifier-activating enzyme 5 yes no 0 0 0 4.5 0.5 1 1 33.273 33.343 3 1.9224E-12 6908 20230619_1885_Aki_TMTPro18x_K_F5 199.46 140.11 104560 64971 90301 95963 109670 107060 108410 101700 131780 100080 118320 115500 112720 94340 108200 80470 131070 126420 96433 59798 93225 94478 112310 107300 110070 104260 132280 101760 121760 115780 115020 97359 111210 83753 125150 119600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176110000 29671 1730 27862 55756;55757 45018 45018 1 9606 Homo sapiens 0.035310905319988706 VQAAHQWR Unmodified 994.5097 0.50969704 1875 A0A994J595;P54289-4;P54289-5;P54289;Q9UIU0;P54289-3;P54289-2;A0A994J5M8;E7ERK3;O95026 CACNA2D1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 1.5 0.5 1 1 32.057 32.087 3 0.00027894 6810 20230619_1880_Aki_TMTPro18x_K_F1 151.56 130.66 71858 46728 73700 74945 72177 67252 84077 84567 95446 72539 89138 90015 83954 67726 92004 61406 97581 81653 66374 43043 74689 73261 75308 68979 84443 84896 96231 74489 91559 89797 86209 70299 93539 63053 93200 77399 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40060000 29672 1875 27863 55758;55759 45019;45020 45019 2 9606 Homo sapiens 0.012222584259347968 VQAELDETK Unmodified 1031.5135 0.5135046 1655 A0A7I2V3A1;Q9UES0;A0A7I2V4L6;B5BU81;A4D2J0;A0A7I2V3V7;O15498-2;O15498;H7C3K7 YKT6 Synaptobrevin homolog YKT6 yes no 0 0 0 2 0 1 45.377 45.459 2 0.0007086 12323 20230619_1881_Aki_TMTPro18x_K_F2 137.98 100.25 41727 25082 50886 62712 63456 72549 56608 68556 69124 55079 74823 73604 68613 65432 66781 43379 76860 76886 38590 23281 51192 60273 64746 72435 57901 69930 69871 56971 76219 73574 70183 66609 68360 45908 73442 72672 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36838000 29673 1655 27864 55760 45021 45021 1 9606 Homo sapiens -0.0009916138151311316 VQAELSQPLTAGGAISELL Unmodified 1896.0204 0.020407676 563 A0A024R9B5;B4DMM7;Q15291 RBBP5 Retinoblastoma-binding protein 5 yes no 0 0 0 5.5 0.5 1 1 66.411 66.454 3 3.5784E-07 20926 20230619_1886_Aki_TMTPro18x_K_F6 102.78 86.144 6062 3817.9 5169.2 4473.7 4583 5696.6 7414.4 7346.7 6262.4 8010.2 5797.1 6533.7 7916.1 7502.9 8118.1 8163.4 6430.8 7921.2 5590.5 3505 5315.2 4485.3 4884.9 5703.4 7274.8 7403.9 6438.8 8010.5 6072.5 6729.7 8024.9 7740.7 8159.1 8180.3 6179.6 7520.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29367000 29674 563 27865 55761;55762 45022 45022 1 9606 Homo sapiens 0.10823828866909935 VQAGDVITIDK Unmodified 1157.6292 0.62920306 4699 Q9Y230;B3KNL2;Q9Y230-2;M0R0Y3;B4DW30 RUVBL2 RuvB-like 2 yes no 0 0 0 5.2 0.748 1 2 2 52.867 52.931 2;3 1.6522E-08 15152 20230619_1886_Aki_TMTPro18x_K_F6 176.42 113.14 193610 156090 175100 201720 176980 220780 206190 210250 233550 236240 235600 239870 274100 228620 224080 268510 264450 257940 178870 143290 179650 200170 184730 221480 207080 216210 236550 237490 243320 242990 276140 238320 231210 268480 252590 245130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1131300000 29675 4699 27866 55763;55764;55765;55766;55767 45023;45024 45024 2 9606 Homo sapiens 0.05669362469302541 VQAHAAAALINFTEDCPK Unmodified 1954.9571 0.95709591 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6 IPO5;RANBP5 Importin-5 yes no 0 0 0 8 0 1 56.46 56.517 3 8.1006E-05 16396 20230619_1888_Aki_TMTPro18x_K_F8 89.866 77.7 59746 43045 40376 46019 42852 61140 45453 32124 44458 66995 53451 41249 62736 44833 64450 64968 51975 82320 55056 39460 42709 46410 44540 60005 45633 35782 45841 65065 54765 43189 63734 47301 64834 65911 50060 77892 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 579300000 29676 782 27867 55768 45025 45025 1 9606 Homo sapiens 0.01781564878001518 VQAINVSSR Unmodified 972.53524 0.53524309 27 Q96C19;A0A024QZ77 EFHD2 EF-hand domain-containing protein D2 yes no 0 0 0 1 0 1 39.774 39.774 2 0.0078592 10010 20230619_1880_Aki_TMTPro18x_K_F1 89.029 69.552 35729 26622 40185 38422 40428 44629 39925 36512 53218 40502 53239 44374 45296 39620 44485 41795 53078 50472 33054 24476 40441 37903 41971 44462 40700 37985 53397 40877 54209 44743 46457 41150 45708 42462 50684 47856 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32734000 29677 27 27868 55769 45026 45026 1 9606 Homo sapiens 0.047876881577167296 VQALEEANNDLENK Unmodified 1585.7584 0.75837933 2786 P35527;CON__P35527 KRT9 Keratin, type I cytoskeletal 9 yes no 0 0 0 2 0.816 1 1 1 54.962 54.984 3 7.3234E-07 16600 20230619_1881_Aki_TMTPro18x_K_F2 130.78 111.12 + 29004 26488 30691 36736 62328 45081 136940 35796 55431 27808 27853 28414 34304 72096 36858 33044 38553 36511 26851 24323 31632 36340 63772 44796 130820 37299 59841 28695 30258 30307 35237 70675 37504 34078 36857 34649 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122050000 29678 2786 27869 55770;55771;55772 45027 45027 1 9606 Homo sapiens -0.011069524291769994 VQAMQISSEKEEDDNEK Oxidation (M) 1994.8739 0.87387937 4680 Q9UKY7;Q9UKY7-2;D3DND1 CDV3 Protein CDV3 homolog yes no 0 1 1 3 0 1 41.648 41.71 4 1.0179E-05 10349 20230619_1882_Aki_TMTPro18x_K_F3 109.38 96.704 32231 23565 31954 32341 43622 39203 37039 38939 44520 41466 45847 48149 47992 38252 39541 39764 55886 46629 29781 21654 32648 32027 44150 39132 37965 39855 44991 41974 47076 48219 48509 39883 41253 40323 53249 44250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64950000 29679 4680 27870 55773 45028 45028 2853 1 9606 Homo sapiens -0.08376261151170183 VQAMQISSEKEEDDNEK Unmodified 1978.879 0.87896475 4680 Q9UKY7;Q9UKY7-2;D3DND1 CDV3 Protein CDV3 homolog yes no 0 0 1 4 0 2 46.053 46.096 3;4 4.8181E-07 12205 20230619_1883_Aki_TMTPro18x_K_F4 124.43 111.2 134070 121300 139670 137660 208590 206390 200400 166890 188220 148260 158460 118120 136270 97604 188960 119150 109100 88314 124100 111160 142450 138590 210700 202650 202010 172740 191160 150020 162880 120710 142070 102560 186430 117920 105010 84284 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96485000 29680 4680 27870 55774;55775 45029;45030 45030 2 9606 Homo sapiens -0.07131957288538615 VQAQAEQGQQELK Unmodified 1455.7318 0.73177065 732 B4DMA8;B4E063;A0A1U9X7Y0;A0A024RCS7;Q9BW19;A0A1U9X7X5 KIFC1 Kinesin-like protein;Kinesin-like protein KIFC1 yes no 0 0 0 4 0 1 41.834 41.877 3 0.0013719 10377 20230619_1883_Aki_TMTPro18x_K_F4 80.469 58.271 26027 22698 29908 27854 31219 36646 34543 34382 41353 38337 41298 38858 44716 36680 40664 33608 43460 40531 24106 20819 30072 27828 32426 36330 34849 35375 41735 38561 42507 39341 45325 37766 41532 34239 41535 38434 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15904000 29681 732 27871 55776 45031 45031 1 9606 Homo sapiens 0.02213403470159392 VQAQGHTLQVAGLR Unmodified 1476.8161 0.8161094 2570 B4DVV1;F5H4B6;B4DQ15;Q8IZ83-3;Q8IZ83 ALDH16A1 Aldehyde dehydrogenase family 16 member A1 yes no 0 0 0 2 0 1 41.241 41.317 3 3.5533E-37 10420 20230619_1881_Aki_TMTPro18x_K_F2 279.65 224.33 38761 31845 41549 42150 45942 46134 47066 49665 55479 48577 47785 50528 53096 43759 49075 48088 52605 48381 35863 29238 42040 41777 47366 46434 47657 50452 55736 49215 49644 50962 53826 45598 50159 48282 50269 45965 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47927000 29682 2570 27872 55777 45032 45032 1 9606 Homo sapiens 0.09677399077554583 VQAQHDYTATDTDELQLK Unmodified 2074.9807 0.98072771 621 B7Z6Y2;A0A024RAF1;A0A024RAJ2;A0A024RAI5;A0A024RAI6;A0A024RAI4;A0A024RAF0;A0A024RAE9;A0A024RAG8;A0A024RAF6;A0A024RAJ3;A0A024RAG9;O00499-2;O00499-5;O00499-3;O00499-6;O00499-11;O00499-4;O00499-8;O00499-7;O00499-10;O00499-9;O00499;Q8WWH9 BIN1 Myc box-dependent-interacting protein 1 yes no 0 0 0 3.5 0.5 1 1 48.075 48.134 3 2.5973000000000003E-30 13301 20230619_1882_Aki_TMTPro18x_K_F3 225.69 198.88 184080 165820 193510 208530 174730 193130 229570 231150 242980 335490 272130 256560 354630 239410 234910 381230 297440 288440 170390 152110 195630 206930 184380 197360 228760 236230 248510 330850 281210 263590 353240 255250 245240 375170 283920 274980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 284520000 29683 621 27873 55778;55779 45033;45034;45035 45033 3 9606 Homo sapiens -0.013763428744823614 VQASLAANTFTITGHAETK Unmodified 1959.0062 0.0061545955 3480 P20290;P20290-2;A0A7I2YQL2;A0A7I2V3T6;A0A7I2V5Y3;D6RDG3;H0Y9Y1 BTF3 Transcription factor BTF3 yes no 0 0 0 2 0 1 52.391 52.43 3 2.3296E-08 15500 20230619_1881_Aki_TMTPro18x_K_F2 117.55 100.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29684 3480 27874 55780 45036 45036 1 9606 Homo sapiens 0.06501176438587208 VQAWYMDDAPGDPR Unmodified 1619.7038 0.70384134 4448 Q9BV57 ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase yes yes 0 0 0 4.5 0.5 1 1 55.17 55.209 3 0.0005528 16293 20230619_1883_Aki_TMTPro18x_K_F4 88.561 79.274 123480 105630 118950 118430 93773 110180 115500 122080 137240 142820 134820 128110 158840 137070 142470 173530 158870 160890 114170 96808 120820 118520 100070 112340 115940 124430 138560 142780 139450 131110 160600 143020 146240 173000 151860 152940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 65521000 29685 4448 27875 55781;55782 45037;45038 45037 2 9606 Homo sapiens -0.08122242781610112 VQCIPGNASCCDCGLADPR Unmodified 2148.8809 0.88091256 3915 Q15057;A0A0U1RQT1;H7C3K3 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes no 0 0 0 5 0 1 47.348 47.425 3 3.5073E-10 12628 20230619_1885_Aki_TMTPro18x_K_F5 97.32 87.662 14948 11612 13683 19164 13208 16958 16373 19309 15450 17111 18221 17044 21169 15484 14178 23143 18819 21449 13808 10692 14035 18688 13857 17352 16308 19502 15911 17398 18678 17276 21164 16438 14847 23008 17979 20380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29466000 29686 3915 27876 55783 45039 45039 1 9606 Homo sapiens -0.1475726634757848 VQCLWCLSDGK Unmodified 1364.6217 0.62169161 1557 A0A7I2YQL3;A0A7P0SXD0;A0A7I2YQQ9;A0A499FIZ0;Q9H7D7-2;Q9H7D7;H0Y9R3;B4DRF0 WDR26 WD repeat-containing protein 26 yes no 0 0 0 2 0 1 61.044 61.054 3 0.021825 19073 20230619_1881_Aki_TMTPro18x_K_F2 59.57 36.691 118380 104200 121550 135920 115770 126420 126670 129810 143980 137620 143140 153260 183740 143610 143510 184560 167250 184860 109540 95631 123200 134520 120990 128630 127670 132630 145710 139150 148720 154610 184260 150670 148180 184690 159910 175510 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47919000 29687 1557 27877 55784 45040 45040 1 9606 Homo sapiens -0.04603436394268101 VQDAVQQHQQK Unmodified 1307.6582 0.65821178 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q96T67;Q5SV16 ATAD3A ATPase family AAA domain-containing protein 3A yes no 0 0 0 6 0 1 34.584 34.631 3 1.4659E-05 7479 20230619_1886_Aki_TMTPro18x_K_F6 142.1 104.42 13884 8214 15631 20299 38123 33401 24867 35482 26458 19263 26546 33104 21146 28267 30509 9820.9 28593 31073 12829 7622.9 16090 19649 37388 32816 25904 35627 26852 20754 27061 32766 22264 28319 30637 11429 27393 29279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25849000 29688 4603 27878 55785 45041 45041 1 9606 Homo sapiens 0.016688998183099102 VQDDEVGDGTTSVTVLAAELLR Unmodified 2287.1543 0.15433498 3756 V9HW96;P78371;F5GWF6;P78371-2;F8VQ14 HEL-S-100n;CCT2 T-complex protein 1 subunit beta yes no 0 0 0 3.5 1.12 1 1 1 1 65.224 65.247 3 8.8183E-38 20499 20230619_1883_Aki_TMTPro18x_K_F4 231.75 219.69 46727 35774 41609 45498 34208 49078 41170 40043 51144 59516 55660 63830 69098 63657 59041 70544 67932 71763 43150 32840 42616 45184 36424 49124 41433 42066 51777 59246 57535 64569 69657 66013 60768 70819 64938 68134 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 390080000 29689 3756 27879 55786;55787;55788;55789 45042;45043 45043 2 9606 Homo sapiens 0.06224398111135088 VQDICFSHDCR Unmodified 1435.5973 0.59726778 2299 B7ZKU7;B2RBN7;Q9H6U6-2;Q9H6U6-7;Q9H6U6;Q9H6U6-3;Q9H6U6-8;Q70WD9;B4E3M9;K7ESE9;Q9H6U6-6 BCAS3 Breast carcinoma-amplified sequence 3 yes no 0 0 0 4 0 1 41.61 41.653 3 0.00015771 10249 20230619_1883_Aki_TMTPro18x_K_F4 114.87 108.84 44784 30367 43373 51529 54568 60795 48082 54512 74393 47286 58172 59820 58262 47469 49795 50691 60273 57056 41355 27988 44391 50373 55681 60590 49670 55921 73556 48613 60443 59741 59058 49552 51364 51248 57545 54136 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32907000 29690 2299 27880 55790 45044 45044 1 9606 Homo sapiens -0.1031069654775365 VQDPSYAPPK Unmodified 1100.5502 0.55022446 1808 Q8TEW0;Q8TEW0-3;A0A8Q3WLH5;Q8TEW0-2;Q8TEW0-11;Q5VWV2;Q8TEW0-6;Q8TEW0-4;Q8TEW0-7;Q8TEW0-5 PARD3 Partitioning defective 3 homolog yes no 0 0 0 3 0 1 45.574 45.65 2 0.042964 12132 20230619_1882_Aki_TMTPro18x_K_F3 61.679 21.612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29691 1808 27881 55791 45045 45045 1 9606 Homo sapiens 0.003971352350390589 VQDTSNTGLGEDIIHQLSK Unmodified 2054.028 0.02801225 2021 Q8IWA0;A8K330;Q05D27 WDR75 WD repeat-containing protein 75 yes no 0 0 0 5.5 0.5 1 1 59.396 59.454 3 2.1698E-39 17905 20230619_1886_Aki_TMTPro18x_K_F6 250.79 218.98 145520 118140 141850 167270 146810 161530 166990 165560 172730 181370 175850 178970 201540 157210 177210 218320 180620 201470 134520 108560 144640 164750 152620 163830 167400 169320 175870 182340 181430 181130 203620 166160 181050 217340 172930 191460 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 120620000 29692 2021 27882 55792;55793 45046;45047;45048 45048 3 9606 Homo sapiens 0.043159363965514785 VQEAARPEEVVSQTPLLR Unmodified 2021.0906 0.090552927 711 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;B7ZM66;A0A0J9YYB5;A0A0J9YWD5;A0A024RCA1;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 PHRF1;KIAA1542 PHD and RING finger domain-containing protein 1 yes no 0 0 1 6 0 1 49.563 49.641 3 1.4784000000000001E-30 13729 20230619_1886_Aki_TMTPro18x_K_F6 235.7 212.81 41459 39191 43744 48645 43611 52338 52034 47328 55644 48378 50305 48040 54439 41026 50533 53378 51415 44748 38390 35941 44285 48391 45557 52520 52077 48746 56252 48842 52037 48568 55209 43214 51516 52957 49139 42617 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78689000 29693 711 27883 55794 45049 45049 1 9606 Homo sapiens 0.12085127255340922 VQEGETIEDGARR Unmodified 1458.7063 0.70628418 486 A0A024R819;A0A024R858;P36639;P36639-3;P36639-2;P36639-1 NUDT1 7,8-dihydro-8-oxoguanine triphosphatase yes no 0 0 1 1.5 0.5 1 1 34.748 34.777 3 4.3103E-12 7887 20230619_1880_Aki_TMTPro18x_K_F1 203.87 175.51 156470 133340 148360 148260 189700 189890 169890 168640 201850 194140 204890 206090 208680 171280 186830 232580 227190 210170 144660 122200 151970 149090 193150 188470 173450 174410 204000 195220 210230 207560 211830 181050 192840 231350 216870 199920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 171170000 29694 486 27884 55795;55796 45050 45050 1 9606 Homo sapiens -0.004720710523088201 VQEIQVVK Unmodified 941.55458 0.55458155 2073 A8K5D5;P49406;S4R3W9;B4DIG4 MRPL19 39S ribosomal protein L19, mitochondrial yes no 0 0 0 6 0 1 49.058 49.136 2 0.001197 13541 20230619_1886_Aki_TMTPro18x_K_F6 146.81 71.701 30434 26150 27513 34675 34902 35142 33517 35502 42526 36583 42667 40394 39448 35824 39747 42132 51891 40866 28128 24006 28341 34311 35625 35514 34155 36274 42796 37041 43615 40699 40408 37422 41090 42164 49455 38868 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66381000 29695 2073 27885 55797 45051 45051 1 9606 Homo sapiens 0.0814664444861819 VQELGHGCAALVTK Unmodified 1481.766 0.76604767 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 7.5 0.5 1 1 46.414 46.481 3 2.8279E-05 12088 20230619_1888_Aki_TMTPro18x_K_F8 109.38 71.427 255600 178870 201630 260870 230030 272450 269880 258830 285530 309420 304350 332030 337610 298370 288690 389120 332220 393430 235720 164510 210140 256690 238010 274190 270230 266790 290930 310660 313010 334930 341300 313640 297410 389490 317870 373410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 316520000 29696 1292 27886 55798;55799 45052 45052 1 9606 Homo sapiens 0.04443528357342075 VQEMNYIQK Unmodified 1151.5645 0.56449431 2485 B4DH39;Q8TAF6;O60488-2;O60488 FACL4;ACSL4 Long-chain-fatty-acid--CoA ligase 4 yes no 0 0 0 7 0 1 49.65 49.734 3 0.0039939 13456 20230619_1887_Aki_TMTPro18x_K_F7 77.662 21.303 51103 39986 47617 51286 44510 47156 52983 46567 62871 51967 70751 59913 70704 50285 66526 67993 72446 70249 47214 36707 48635 50810 46709 47993 53235 47799 63730 52496 72142 60213 71895 53170 68055 68161 69244 66707 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36146000 29697 2485 27887 55800 45053 45053 1 9606 Homo sapiens -0.0052253560832014045 VQENCIDLVGR Unmodified 1301.6398 0.63978452 3309 O75533;H7C341 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 0 3.5 0.5 1 1 47.702 47.761 2 5.4395E-05 12994 20230619_1883_Aki_TMTPro18x_K_F4 141.88 105.45 186560 163610 218550 204930 206540 229310 228440 202510 238820 239460 223380 250250 270520 221440 208710 303390 301130 272450 172830 150090 219090 203910 215960 229430 229390 209820 242240 240390 232130 252600 271720 233690 218920 301540 287030 259210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 724780000 29698 3309 27888 55801;55802 45054;45055 45055 2 9606 Homo sapiens 0.0010302185207820003 VQEQVHTLLSQDQAQAAR Unmodified 2021.029 0.029015303 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 6 0.816 1 1 1 47.691 47.773 3 3.1296E-85 12920 20230619_1886_Aki_TMTPro18x_K_F6 346.73 311.4 386380 324710 375850 380220 428200 524100 450230 482200 530460 470730 538270 565190 550880 482400 580830 565460 591120 646990 357260 297740 383590 381370 441740 517950 455250 494990 535970 479320 552780 566760 563360 504740 590590 571510 565870 613450 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1088800000 29699 673 27889 55803;55804;55805 45056;45057;45058 45057 3 9606 Homo sapiens 0.05934195556119448 VQESADELQK Unmodified 1145.5564 0.55643205 1931 C9J1Z8;A4D0Z3;B4DLJ3;P84085 ARF5 ADP-ribosylation factor 5 yes no 0 0 0 2 0 1 43.779 43.862 2 7.0313E-06 11615 20230619_1881_Aki_TMTPro18x_K_F2 188.99 128.01 44809 22630 56383 59059 66026 82485 56607 63489 68209 54557 80924 96397 72275 88377 74722 43274 105720 97819 41424 21043 56482 56863 67629 81088 58027 65932 69260 56935 82164 95572 74363 88975 77461 47387 100800 92360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48936000 29700 1931 27890 55806 45059 45059 1 9606 Homo sapiens -0.010523913241058835 VQESTKGPDEAK Unmodified 1287.6307 0.63065962 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;B2R7W4;B4DMB1;O43390-4;O43390-3;B4DT28;A0A6Q8PH31;A0A6Q8PH35;A0A6Q8PEX7;B4DMD1 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 0 0 1 4 0 1 37.271 37.314 3 2.1741E-05 8463 20230619_1883_Aki_TMTPro18x_K_F4 128.61 104.32 49163 27270 78272 68091 135060 109850 86086 104870 63109 51893 95284 66551 46517 39056 115850 13408 39728 20526 45591 25322 77827 65899 134020 107790 89030 105970 66802 55677 94051 66018 52193 39831 111810 14647 38615 19491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40408000 29701 3254 27891 55807 45060 45060 1 9606 Homo sapiens -0.0016504823256582313 VQEVLLK Unmodified 827.51165 0.5116541 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;B7Z766;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 7.5 0.5 1 1 53.183 53.255 2 0.0063643 15010 20230619_1887_Aki_TMTPro18x_K_F7 133.6 48.335 685040 552710 598940 694870 813130 903560 847430 805770 995380 869960 955050 1020400 992890 848160 912380 1093000 1073500 1046400 632720 507220 619510 692590 828970 895520 856630 831660 1003700 880650 983880 1023400 1008500 893290 939070 1091300 1025400 994480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1362600000 29702 874 27892 55808;55809 45061;45062 45061 2 9606 Homo sapiens 0.09099874391199592 VQEYCYDNIHFMK Oxidation (M) 1761.7491 0.74907697 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;B5MCE7 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 1 0 7 0 1 50.823 50.9 3 0.0012933 13995 20230619_1887_Aki_TMTPro18x_K_F7 76.357 70.777 83566 70318 74482 79021 78105 74226 95065 92603 80718 97373 89731 99146 101870 90227 88308 139200 104580 117430 77216 64451 76495 79075 81164 75897 94434 93466 83508 98138 92252 100330 102990 95903 91226 137710 99989 111720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163970000 29703 607 27893 55810 45063 45063 347 1 9606 Homo sapiens -0.10132760310762023 VQEYCYDNIHFMK Unmodified 1745.7542 0.75416235 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;B5MCE7 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 0 7 0 1 53.756 53.823 3 1.9144E-07 15254 20230619_1887_Aki_TMTPro18x_K_F7 145.29 134.43 207710 171280 199700 182840 147420 201540 204640 227250 203860 274730 249450 265530 298740 245870 210740 335020 308690 317270 192010 156920 202690 184120 159080 202930 203180 231520 209910 274630 255970 269360 299180 259020 221940 333830 294470 301500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 331760000 29704 607 27893 55811 45064 45064 1 9606 Homo sapiens -0.08888456448130455 VQFCPFEK Unmodified 1053.4954 0.49535211 4342 Q96EL3;B9A051 MRPL53 39S ribosomal protein L53, mitochondrial yes no 0 0 0 4.5 3.5 1 1 56.3 56.3 2 6.5966E-09 16265 20230619_1888_Aki_TMTPro18x_K_F8 163.99 103.55 113080 103960 107700 121630 94315 116050 119900 124320 127490 121740 117700 100380 131780 102010 112490 146820 130660 125970 104600 95290 109760 121330 99806 117950 119680 126360 129070 122520 121720 103080 133090 107580 115920 145540 124800 119880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38048000 29705 4342 27894 55812;55813 45065;45066 45066 2 9606 Homo sapiens -0.02925574837217937 VQGFQVEYK Unmodified 1096.5553 0.55530983 2084 A8K622;Q59F99;O95793-2;O95793-3;O95793;Q5JW30;B3KRE0;B4DPJ9 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 yes no 0 0 0 7 0 1 52.109 52.183 2 0.00026549 14590 20230619_1887_Aki_TMTPro18x_K_F7 154.56 85.174 66304 57493 64111 58771 54219 68299 64676 63451 72859 72828 68703 62039 74490 56577 61095 76268 76732 66432 61316 52646 65135 59421 57459 68239 64880 65398 73620 72778 70882 63317 75176 59611 63303 75732 73194 63240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18881000 29706 2084 27895 55814 45067 45067 1 9606 Homo sapiens 0.010894390976545765 VQGGALEDSQLVAGVAFK Unmodified 1787.9418 0.94176342 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 6.67 0.471 1 2 61.82 61.864 2;3 1.0066E-29 18624 20230619_1887_Aki_TMTPro18x_K_F7 224.05 199.2 456590 404230 460190 497050 423150 477210 494620 470780 514680 584270 561770 581690 589550 536000 550610 680650 637050 730820 422440 370750 466860 494110 444370 483970 495330 484600 525500 584210 575580 589140 599290 562030 566120 684030 609340 693260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2449200000 29707 4005 27896 55815;55816;55817 45068;45069 45069 2 9606 Homo sapiens 0.07931021352442258 VQGSDSDEEVVVATTR Unmodified 1690.801 0.80097243 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;P26640-2 VARS Valine--tRNA ligase yes no 0 0 0 1 0 1 44.623 44.623 3 5.9881E-34 12121 20230619_1880_Aki_TMTPro18x_K_F1 255.96 230.63 78337 54259 62558 67944 69149 76426 79645 76002 87046 96645 90108 98631 107620 74765 92454 107070 112470 110390 72246 49822 64998 67606 71626 76631 79913 78223 88466 96592 93131 99201 108470 79704 95461 107210 107400 104820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 572620000 29708 725 27897 55818 45070 45070 1 9606 Homo sapiens -0.016796020916672205 VQHTVCMDCSSYSTYCYR Unmodified 2315.9068 0.90679296 3052 Q498Y2;H0YKU8;Q6JHV3;H0YMI4;Q9Y6I4;H0YL81;H0YMP6;B4DV65 USP3 Ubiquitinyl hydrolase 1;Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 0 0 0 8 0 1 44.31 44.329 3 7.5332E-24 11221 20230619_1888_Aki_TMTPro18x_K_F8 202.34 198.62 9001.5 5411.8 7956.8 10583 7000.8 6474 8431.2 7918.4 7683.7 12816 8435.7 9434.6 8558 8270.8 6889.2 11629 11627 10742 8301.7 5001.1 8169 10198 7374.8 6889.3 8398 8126.9 7929.9 12575 8631.1 9681.4 8664.1 8745.4 7322.3 11568 11073 10215 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33480000 29709 3052 27898 55819 45071 45071 1 9606 Homo sapiens -0.1985241689594659 VQHVIHYQVPR Unmodified 1374.7521 0.75205258 3008 G3V529;Q9GZR7;B4DM03;B4DKV2;Q9GZR7-2;A0A1W2PRR2;F5GYL3;B4E300;Q7Z4W0;A0A087WXU8;Q7Z4X3;B4DGI6 DDX24 ATP-dependent RNA helicase DDX24 yes no 0 0 0 3 0 1 37.085 37.139 4 2.4511E-12 8353 20230619_1882_Aki_TMTPro18x_K_F3 204.34 157.86 43224 17114 38920 47298 47292 49110 46363 44049 47306 55050 53012 45077 52731 48238 44692 57395 51833 52015 39806 15960 40067 45233 48415 49358 46833 45652 48420 54743 54050 46353 53469 50127 46053 57194 49526 49461 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274360000 29710 3008 27899 55820 45072 45072 1 9606 Homo sapiens 0.07966663711249566 VQIAANEETQEREEQMK Unmodified 2031.9531 0.95313275 3605 P49321;Q53H03;P49321-3;P49321-4;B4DS57;Q6PJY7 NASP Nuclear autoantigenic sperm protein yes no 0 0 1 3 0 1 43.51 43.58 3 4.844E-05 11169 20230619_1882_Aki_TMTPro18x_K_F3 101.39 86.147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29711 3605 27900 55821 45073 45073 1 9606 Homo sapiens -0.02156569406406561 VQIEAAQCPDVVVAQIDPK Unmodified 2079.067 0.067040293 1526 G5EA29;H0YEL0;A0A8J9FN78;A0A8J9FJK1;A0A3B3IU42;O14893-5;O14893-3;O14893-2;O14893 GEMIN2 Gem-associated protein 2 yes no 0 0 0 5 0 1 60.721 60.771 3 0.09255 18214 20230619_1885_Aki_TMTPro18x_K_F5 42.64 29.66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29712 1526 27901 55822 45074 45074 1 9606 Homo sapiens 0.0706694542650439 VQIFEYNENTRK Unmodified 1539.7682 0.76815616 3165 K7ELV2;Q96EE3;Q96EE3-1 SEH1L Nucleoporin SEH1 yes no 0 0 1 8 0 1 48.281 48.348 3 0.025843 12851 20230619_1888_Aki_TMTPro18x_K_F8 58.04 37.377 62592 63029 72688 73294 79000 67377 76821 72933 65416 70158 77906 66218 63850 57111 93555 69242 71317 62315 58038 57754 73071 73130 81269 68782 77266 74078 67808 70900 78724 67142 67011 59834 93246 69087 68389 59294 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38893000 29713 3165 27902 55823 45075 45075 1 9606 Homo sapiens 0.019862803668274864 VQIHANCR Unmodified 996.49233 0.49233242 4755 Q9Y6A4 CFAP20 Cilia- and flagella-associated protein 20 yes yes 0 0 0 8 0 1 29.422 29.443 3 0.00073058 5446 20230619_1888_Aki_TMTPro18x_K_F8 110.81 87.454 86123 49978 96154 90361 115590 117440 108460 120770 122590 74167 108320 103760 94714 88263 109420 66929 130040 101630 79567 46138 97089 88256 118240 116720 110240 121860 123310 78415 111220 103490 97878 90427 111890 69697 124020 96268 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31237000 29714 4755 27903 55824 45076 45076 1 9606 Homo sapiens -0.006054051713704212 VQIPIMLVGNK Oxidation (M) 1226.7057 0.70567924 911 C9J931;Q6NZ61;A8K005;A0A090N900;Q15382;C9J469 RHEB GTP-binding protein Rheb yes no 0 1 0 4 0 1 60.471 60.474 3 0.0016064 18536 20230619_1883_Aki_TMTPro18x_K_F4 80.24 47.742 29830 22625 28235 29679 30270 36217 33708 30724 43923 30779 31163 37527 34562 30957 37666 37457 38330 47213 27558 20777 28859 29471 31414 35989 34085 31781 43622 31341 32778 37554 35334 32499 38285 38079 36728 44708 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11434000 29715 911 27904 55825 45077 45077 522 1 9606 Homo sapiens 0.10139462764959717 VQIPIMLVGNKK Unmodified 1338.8057 0.80572764 911 C9J931;Q6NZ61;A8K005;A0A090N900;Q15382;C9J469 RHEB GTP-binding protein Rheb yes no 0 0 1 7 0 1 58.894 58.944 3 0.069225 17367 20230619_1887_Aki_TMTPro18x_K_F7 41.48 30.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29716 911 27905 55826 45078 45078 1 9606 Homo sapiens 0.1498770009875443 VQISPDSGGLPER Unmodified 1353.6888 0.6888432 3197 M0R0C6;Q92945;A0A384P5V3;B4DV73;M0QYH3;M0QXW7 KHSRP Far upstream element-binding protein 2 yes no 0 0 0 4 0.816 1 1 1 46.208 46.274 2 3.4855E-21 12253 20230619_1883_Aki_TMTPro18x_K_F4 235.49 216.4 468530 414730 440420 480590 448540 516240 515820 515490 554400 588800 604870 638350 660540 563890 576690 691930 662420 676250 433240 380160 450150 480490 467270 519350 517480 528660 564880 592540 620870 643290 668460 590830 593260 692080 633060 642420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1256000000 29717 3197 27906 55827;55828;55829 45079;45080 45079 2 9606 Homo sapiens 0.026146334126906368 VQLAELIDCLDK Unmodified 1415.733 0.7330162 1361 E7ETD6;E9PE19;A0A2R8Y7Q1;J3QQK4;Q12830-4;Q12830-2;Q12830;F5GXF5;B4DDK2;B4DM40 BPTF Nucleosome-remodeling factor subunit BPTF yes no 0 0 0 6 0 1 64.441 64.487 3 0.012657 20123 20230619_1886_Aki_TMTPro18x_K_F6 61.212 39.982 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29718 1361 27907 55830 45081 45081 1 9606 Homo sapiens 0.04177901514640325 VQLDTIQGELNAPTQFK Unmodified 1900.9894 0.9894419 1804 B4DRV5;A0A8Q3WLP2;Q53FD7;Q53H29;A0A8Q3WKJ4;Q7Z3B4-3;Q7Z3B4;A0A8Z5F6C8;Q7Z3B4-2;Q9NSY5;A0A8Q3WKK2 NUP54;DKFZp434L1613 Nucleoporin p54 yes no 0 0 0 7 0 1 61.563 61.602 3 0.010386 18520 20230619_1887_Aki_TMTPro18x_K_F7 61.957 49.597 231220 253260 353550 321870 383520 297140 397840 299370 216230 407120 563040 605680 285690 332010 717550 267890 238590 533480 215190 232210 349120 319200 394490 302810 394910 309060 244630 411010 550370 595810 320720 347950 693290 286540 234950 502810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47729000 29719 1804 27908 55831 45082 45082 1 9606 Homo sapiens 0.0749867555266519 VQLEHVQTR Unmodified 1108.5989 0.59890598 1116 O75150;O75150-4;A0A0S2Z537;A8K6K1;H3BP71;A0A0S2Z4Z2;B4DMM1;Q6ZN99;B4DFU2;B4E313;B4DEN2;A0A087WTK2 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 0 0 0 6 0 1 34.437 34.484 3 2.2423E-06 7415 20230619_1886_Aki_TMTPro18x_K_F6 156.26 113.87 70697 49649 69752 72582 76853 86774 79074 75915 99738 84115 93665 84221 100030 85869 82760 98125 99645 92617 65307 45664 71062 71571 79373 86391 80231 78529 100150 84638 96580 85615 101090 89162 85473 98066 95128 88052 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80299000 29720 1116 27909 55832 45083 45083 1 9606 Homo sapiens 0.048950485947898414 VQLPAYLK Unmodified 930.55385 0.55385327 4235 Q8N5K1;A0A2R8Y540;I3L1N9 CISD2 CDGSH iron-sulfur domain-containing protein 2 yes no 0 0 0 3 0 1 57.022 57.055 3 0.0028181 17224 20230619_1882_Aki_TMTPro18x_K_F3 100.15 59.12 49896 45633 52572 57339 44221 57352 62707 64761 75987 36108 29276 23457 26863 26166 51829 37663 35630 25546 46191 41858 53106 56953 47161 58129 62536 64878 74661 37711 32148 24539 28718 27487 51288 37035 34178 24429 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23677000 29721 4235 27910 55833 45084 45084 1 9606 Homo sapiens 0.08579849799548356 VQLPPEIQLAQR Unmodified 1390.7932 0.79324869 3663 Q6PJJ2;P56182;Q53FR7;B4DZM3;D6RE82 RRP1 Ribosomal RNA processing protein 1 homolog A yes no 0 0 0 4.5 3.5 1 1 57.017 57.068 3 0.0013389 16542 20230619_1888_Aki_TMTPro18x_K_F8 84.718 43.688 24291 21157 21729 27964 24653 26201 26358 21994 33749 23151 28615 25271 28943 23971 38251 25594 24851 29415 22450 19421 22367 27642 25431 26534 26689 22819 33715 23432 29614 25531 29952 24865 37924 25950 23939 27881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73280000 29722 3663 27911 55834;55835 45085;45086 45086 2 9606 Homo sapiens 0.11348379960099919 VQLQEAER Unmodified 971.50361 0.50360861 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 0 2 0 1 37.752 37.815 2 0.01818 8833 20230619_1881_Aki_TMTPro18x_K_F2 90.64 64.746 123500 97382 115580 127810 122980 150130 128320 149140 156830 151600 174770 185230 173050 158640 143230 138310 199580 192310 114110 89415 118270 126850 127480 150030 130030 152430 158850 154090 178420 185500 175370 163460 149240 142370 190360 182110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 180600000 29723 380 27912 55836 45087 45087 1 9606 Homo sapiens 0.016716954037519827 VQLQEAERR Unmodified 1127.6047 0.60471964 380 A0A024R663;Q86UP2;Q86UP2-2;Q86UP2-4;Q86UP2-3 KTN1 Kinectin yes no 0 0 1 4 0 1 33.366 33.42 3 0.00022102 6889 20230619_1883_Aki_TMTPro18x_K_F4 125.66 56.318 65874 49862 70980 63715 72587 76918 70293 75348 79837 76942 93228 82810 87560 76462 84014 80350 100880 73509 60922 45778 71649 63402 75177 76745 71356 77100 81306 77857 94703 83629 89396 79262 86391 80333 96172 69992 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43965000 29724 380 27913 55837 45088 45088 1 9606 Homo sapiens 0.04602147106470511 VQLSGPQEAEK Unmodified 1184.6037 0.60371659 4692 Q9UNS2;B4DN01;H7C3P9;Q9UNS2-2 COPS3 COP9 signalosome complex subunit 3 yes no 0 0 0 4 0 1 44.381 44.425 2 3.1964E-09 11459 20230619_1883_Aki_TMTPro18x_K_F4 218.15 157.71 51638 40768 47663 51419 46861 60928 57109 56151 72282 64683 72388 67728 76669 60893 58500 76087 76770 73582 47707 37417 48775 51172 49118 60752 57453 57919 72748 65032 74393 68424 77235 63858 60910 76024 73254 69927 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37328000 29725 4692 27914 55838 45089 45089 1 9606 Homo sapiens 0.018798879469159147 VQLTTCIHHIIK Unmodified 1461.8126 0.81260393 3354 O95373;E9PLB2 IPO7 Importin-7 yes no 0 0 0 3.5 0.5 1 1 47.368 47.429 4 7.1051E-07 12840 20230619_1883_Aki_TMTPro18x_K_F4 152.31 116.02 132460 92556 116480 124120 110630 98752 137660 133980 132750 181690 164480 131820 178710 142090 100120 181610 187990 216060 122250 85047 119590 122460 115900 102660 137120 135700 137030 179440 167550 136540 178200 148500 108500 183500 179210 204740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2236400000 29726 3354 27915 55839;55840 45090 45090 1 9606 Homo sapiens 0.10017012979324136 VQLVVGDGR Unmodified 941.52943 0.52942943 1398 B7Z972;A0A384MDK7;A0A3F2YNX8;P22061;P22061-2;F6S8N6 PCMT1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 6.5 0.5 1 1 46.521 46.607 2 0.0056122 12045 20230619_1887_Aki_TMTPro18x_K_F7 93.098 60.466 411980 352950 416540 430170 391320 450950 455500 423990 520080 547140 597010 568240 577890 440820 546490 616910 644650 656720 381090 323730 422500 428400 410360 453830 457630 438440 529290 546920 607870 571760 588630 468550 562080 619070 615930 623290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 797090000 29727 1398 27916 55841;55842 45091 45091 1 9606 Homo sapiens 0.05632589646052111 VQLYELK Unmodified 891.50657 0.50656873 4075 Q5VTL8;Q5VTL8-2;Q69YH0 PRPF38B;DKFZp434O1172 Pre-mRNA-splicing factor 38B yes no 0 0 0 7.5 0.5 1 1 54.715 54.78 2;3 0.0051576 15662 20230619_1887_Aki_TMTPro18x_K_F7 119.29 17.302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29728 4075 27917 55843;55844 45092;45093 45092 2 9606 Homo sapiens 0.05647570528549295 VQNAGYSVSRPEGDTGK Unmodified 1763.8438 0.84384029 3251 O43286 B4GALT5 Beta-1,4-galactosyltransferase 5 yes yes 0 0 1 6 0 1 39.153 39.238 3 0.00011369 9211 20230619_1886_Aki_TMTPro18x_K_F6 90.561 72.405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29729 3251 27918 55845 45094 45094 1 9606 Homo sapiens -0.00752787243527564 VQNHEIELTK Unmodified 1209.6354 0.63535107 791 A0A067XG54;A0A804HIW2;Q8NB49-2;Q8NB49-3;Q8NB49-4;Q8NB49;H7C0E8 ATP11C Phospholipid-transporting ATPase;Phospholipid-transporting ATPase IG yes no 0 0 0 5 0 1 41.961 42.046 3 0.0387 10391 20230619_1885_Aki_TMTPro18x_K_F5 43.501 25.693 45365 33612 39096 42455 50844 48911 50167 53770 58689 39350 55077 46573 46542 37516 49960 52681 53912 41952 41875 30857 40427 42239 51831 49091 50885 54197 59070 40781 56255 46725 47926 39782 50973 52093 51461 40004 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19141000 29730 791 27919 55846 45095 45095 1 9606 Homo sapiens 0.03891880700825823 VQNIHPVESAK Unmodified 1220.6513 0.65133548 1358 E9PJP3;A7LNF5;E9PM22;E9PLR0;E9PLE9;A0A2R8Y6G7;E9PKG6;Q2L696;P80303-2;P80303 NUCB2;Nucb2 Nucleobindin-2;Nesfatin-1 yes no 0 0 0 6.5 0.5 1 1 39.212 39.288 3 2.0508E-05 8938 20230619_1887_Aki_TMTPro18x_K_F7 126.1 91.38 96158 70477 87749 102470 122550 129790 127880 126470 165720 118090 140120 144230 134000 124170 122980 142680 168600 156730 88792 64805 90466 101160 124720 129060 129720 129200 165480 120690 144720 144590 136570 129680 127870 143810 160790 148760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 126270000 29731 1358 27920 55847;55848 45096;45097 45097 2 9606 Homo sapiens 0.04983586937760265 VQNMALYADVGGK Unmodified 1364.6758 0.67583567 3625 P51571 SSR4 Translocon-associated protein subunit delta yes yes 0 0 0 8 0 1 56.288 56.345 2 3.5158E-06 16282 20230619_1888_Aki_TMTPro18x_K_F8 142.08 105.75 50024 38516 48438 50103 41411 50301 48543 48266 59139 59186 55346 51031 57393 48297 46879 62572 58393 63697 46227 35365 49244 49648 43816 50791 48875 49745 59515 58990 57010 52102 58020 50682 48579 62661 55795 60468 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47623000 29732 3625 27921 55849 45098 45098 1 9606 Homo sapiens 0.008084790289103694 VQPEFLQT Unmodified 960.49165 0.49164694 2196 R4GMQ7;B1AMU7;B1AMU4;Q9Y3B2;B1AMU3 EXOSC1 Exosome complex component CSL4 yes no 0 0 0 4 0 1 57.663 57.666 2 0.030703 17353 20230619_1883_Aki_TMTPro18x_K_F4 79.451 65.294 69052 50464 53133 51528 51230 60923 57026 56155 66165 68755 75217 89633 81721 75660 66152 91041 98724 127350 63686 46241 55260 52111 53609 60801 57464 58042 67266 69444 77113 89547 82536 79342 69486 93173 94342 120460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66514000 29733 2196 27922 55850 45099 45099 1 9606 Homo sapiens 0.00982078660570096 VQPPGPVK Unmodified 820.48069 0.48068833 2173 Q8IVD9;B0FTY2 NUDCD3 NudC domain-containing protein 3 yes no 0 0 0 8 0 1 42.649 42.652 2 0.010011 10551 20230619_1888_Aki_TMTPro18x_K_F8 94.407 52.905 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29734 2173 27923 55851 45100 45100 1 9606 Homo sapiens 0.06326721076936792 VQPSDQVGK Unmodified 956.49271 0.49270958 3548 P35520;P35520-2;B7Z2D6;B7Z6W5;Q9NTF0;H7C2H4;Q96EH7;H7C1W6;H7C2W0 CBS;DKFZp727E011 Cystathionine beta-synthase yes no 0 0 0 5 0 1 39.044 39.136 2 0.00049454 9188 20230619_1885_Aki_TMTPro18x_K_F5 147.2 107.1 20808 10913 33176 31718 25910 35735 23158 27254 25129 28261 47031 59855 35041 35140 43825 16128 52398 54981 19292 10170 32555 30329 27440 35576 23631 28473 26335 29443 46798 58386 36592 36069 44725 18778 50069 51800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15794000 29735 3548 27924 55852 45101 45101 1 9606 Homo sapiens 0.012722930294899015 VQPYLDEFQK Unmodified 1265.6292 0.62920306 2781 CON__P15497 yes yes 0 0 0 6 0 1 57.575 57.644 2 0.00025646 17134 20230619_1886_Aki_TMTPro18x_K_F6 152.54 113.52 + 26811 65021 56580 36725 99345 116750 78404 68501 100400 86846 140380 195290 82469 103350 168330 99505 127990 219960 25323 59182 55550 40551 99250 110940 80923 73801 102470 90089 140120 189940 90258 109390 167090 106980 123480 207310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 417790000 29736 2781 27925 55853 45102 45102 1 0.00701362469317246 VQQAELHTGSLPR Unmodified 1434.7579 0.75792582 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;A2NX49 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 7 0 1 39.233 39.297 3 7.7426E-12 8951 20230619_1887_Aki_TMTPro18x_K_F7 192.18 144.58 35056 28692 36457 32180 31302 32468 27941 30677 36929 39977 41593 37220 38300 29999 39037 42940 39243 39266 32427 26300 36801 32238 32830 32789 28685 31707 37318 39813 42281 37684 39207 31877 39716 42725 37545 37334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77337000 29737 3833 27926 55854 45103 45103 1 9606 Homo sapiens 0.05793717432266021 VQQLVPK Unmodified 810.49634 0.49633839 1069 F5GXS2;A0A0S2Z3G9;O43707;A0A8V8TL71;H7C144;Q96BG6;O43707-2;O43707-3 ACTN4 Alpha-actinin-4 yes no 0 0 0 2 0 1 47.766 47.837 3 0.03929 13440 20230619_1881_Aki_TMTPro18x_K_F2 69.383 45.048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29738 1069 27927 55855 45104 45104 1 9606 Homo sapiens 0.08351007593989834 VQQQEDEITVLK Unmodified 1428.746 0.74602373 4548 Q9HC35;B5MBZ0;Q9HC35-2;B6EXY3;C1PHA1;J7MA22;C1PHA0;B3XZL9;B3XZM0;A9YLN7;I1X3U7;B6EXY4;B6EXY5 EML4;EML4-ALK variant 7;EML4-ALK;EML4-ALK variant 6;EML4/ALK fusion Echinoderm microtubule-associated protein-like 4;Tyrosine-protein kinase receptor yes no 0 0 0 3 0.707 1 2 1 52.376 52.422 2;3 1.1924E-12 15232 20230619_1882_Aki_TMTPro18x_K_F3 231.7 151.46 143890 117480 133380 132260 127470 153580 134550 136790 162450 162420 157250 170230 170060 141810 142340 188930 176810 182410 132970 107690 136270 132680 133230 153300 136170 141580 163780 163020 162210 171490 171860 149710 147390 188590 168880 173310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 596650000 29739 4548 27928 55856;55857;55858;55859 45105;45106 45105 2 9606 Homo sapiens 0.04880055898388491 VQQSLGTR Unmodified 887.48248 0.48247924 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;B5MCE7;Q75MG1;E9PFD4 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 0 7.5 0.5 1 1 34.309 34.343 2 0.0020587 7235 20230619_1888_Aki_TMTPro18x_K_F8 132.76 78.601 78098 40358 100440 85574 151160 155540 115890 152850 134340 48832 68845 63325 43858 47511 97467 29609 73377 46541 72220 37376 100830 83576 151920 151800 119510 153360 132920 55467 72693 63149 48186 48550 96447 31225 70253 44124 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 46996000 29740 607 27929 55860;55861 45107;45108 45108 2 9606 Homo sapiens 0.034237300949030214 VQQTVQDLFGR Unmodified 1289.6728 0.67279921 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;B7Z4T3;B7Z1V7;A1XP52 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 1.5 0.5 1 1 60.007 60.013 2 7.2492E-09 18623 20230619_1881_Aki_TMTPro18x_K_F2 201.33 163.78 447010 382870 393990 430350 386720 431830 459000 440160 472420 518720 475310 494000 557970 442050 513460 598010 520290 557190 413050 350900 404770 430860 404300 436880 459060 451270 481060 519150 491370 500920 564500 466080 523760 595900 498000 529520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1392200000 29741 1488 27930 55862;55863 45109;45110 45110 2 9606 Homo sapiens 0.0395497196643646 VQRPPSAASAAPSSSK Unmodified 1539.8005 0.80051892 4053 Q5SRE5;Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog yes no 0 0 1 2.5 0.5 1 1 35.083 35.141 3 9.7079E-06 7605 20230619_1882_Aki_TMTPro18x_K_F3 108.25 88.992 30156 22360 28454 30327 40626 35239 36122 34831 44834 37481 39649 39026 40679 35187 37930 38958 47643 36547 27855 20543 29229 30032 41054 35272 36938 35681 44965 37802 40964 39419 41372 36615 39154 38958 45414 34779 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57121000 29742 4053 27931 55864;55865 45111 45111 1 9606 Homo sapiens 0.05221067769821275 VQSGNINAAK Unmodified 1000.5302 0.53015772 2435 B3KX11;P49368;Q59H77;Q2TU64;P49368-2;E9PRC8;Q5SZX6;Q5SZX9;E9PM09;Q5SZW8 CCT3 T-complex protein 1 subunit gamma yes no 0 0 0 7.33 0.471 2 1 39.079 39.104 2 1.1258E-10 8891 20230619_1887_Aki_TMTPro18x_K_F7 161.17 113.35 42517 17759 57489 55066 91095 95128 68185 83245 62723 48904 85629 92816 65363 74575 78544 26599 91415 90340 39309 16599 57639 52989 91238 92792 69972 84883 65035 52599 85971 91525 68101 74973 80049 31252 87333 85134 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47936000 29743 2435 27932 55866;55867;55868 45112;45113 45112 2 9606 Homo sapiens 0.029913842950691105 VQSLCYLQLTR Unmodified 1379.7231 0.72312022 285 C9JJ54;A0A024R488;Q8IWB7;Q9H8N9 WDFY1 WD repeat and FYVE domain-containing protein 1 yes no 0 0 0 4.5 0.5 1 1 57.684 57.715 2 0.00021189 17038 20230619_1885_Aki_TMTPro18x_K_F5 150.09 120.62 35205 25007 29689 34129 29642 35401 34542 36397 41065 36373 33640 33848 40188 35529 37770 46778 41494 46127 32484 22981 30648 33726 30968 35709 34747 37108 41172 36697 35159 34560 40712 37188 38707 46760 39697 43801 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17049000 29744 285 27933 55869;55870 45114 45114 1 9606 Homo sapiens 0.04844758299941532 VQSLEGEK Unmodified 888.45526 0.45526144 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 4 0 2 44.165 44.209 2;3 8.4939E-09 11370 20230619_1883_Aki_TMTPro18x_K_F4 158.76 57.112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29745 630 27934 55871;55872 45115;45116 45116 2 9606 Homo sapiens 0.006572017638632133 VQSLQATFGTFESILR Unmodified 1795.9468 0.9468488 673 A0A024RBH2;Q07065;Q8TB01;Q6NWZ1;B3KVX6 CKAP4 Cytoskeleton-associated protein 4 yes no 0 0 0 4 0 1 65.416 65.428 3 5.9465E-12 20580 20230619_1883_Aki_TMTPro18x_K_F4 167.71 132.51 7559.9 4177.6 4985.4 5042.6 5390.3 5381.7 7006.5 5937.5 7499.9 6696 6209 7852.7 8414.3 6134.1 6207.4 7095.8 6544.7 8704.8 6956.5 3838.9 5285.1 5028.2 5611.9 5431 6980.9 6050.6 7562 6762 6537.7 7853.9 8405.8 6441.8 6375 7202.2 6273.6 8242.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18034000 29746 673 27935 55873 45117 45117 1 9606 Homo sapiens 0.080713252150872 VQSVEQIR Unmodified 957.52434 0.52434406 3668;3029 P56545;P56545-3;P56545-2;A0A087WYL1;X5D7T7;H0Y8U5;X5D8Y5;Q4KMQ8;Q13363-2;Q13363;D6RAX2;E7ESU7 CTBP2;CTBP1 C-terminal-binding protein 2;C-terminal-binding protein 1 no no 0 0 0 4.5 0.5 1 1 40.785 40.85 2 0.0010455 9893 20230619_1883_Aki_TMTPro18x_K_F4 150.24 101.18 426460 306660 391860 411650 519770 520020 469810 484760 566640 471110 579760 554680 525050 496220 475830 456200 656290 526910 393770 281750 402910 408440 528210 516860 479620 497200 571920 479610 591580 557320 535780 511500 494490 463220 625290 500180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 975120000 29747 3668;3029 27936 55874;55875 45118;45119 45118 2 9606 Homo sapiens 0.043882857834205424 VQTAALR Unmodified 757.44464 0.44463717 3093;779 H7C4F6;O00629;A0A7I2V340;A0A024RDV7;O00505;Q53F09 KPNA4;KPNA3 Importin subunit alpha-3;Importin subunit alpha;Importin subunit alpha-4 no no 0 0 0 8 0 1 36.243 36.23 2 0.036792 7896 20230619_1888_Aki_TMTPro18x_K_F8 92.187 23.875 146170 82456 177230 161520 215690 237040 168750 184040 194780 119980 147660 143030 137820 124300 168080 130170 180200 133090 135140 76226 177910 157470 219690 232580 173760 189900 194880 125560 153340 143610 142510 129090 170820 131030 171970 126550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176870000 29748 3093;779 27937 55876 45120 45120 1 9606 Homo sapiens 0.056212639000818854 VQTESSTGSVGSNR Unmodified 1407.659 0.65899964 59 A0A024QZR3;B3KPC1;Q9BRX2 hCG_2002731;PELO Protein pelota homolog yes no 0 0 0 4 0 1 31.608 31.668 3 0.017699 6216 20230619_1883_Aki_TMTPro18x_K_F4 59.41 47.97 6154.7 4647.5 8855.5 7452 5666.2 9743 7987.1 7294.6 9340.6 7601 6996 6898 8537.2 5444.9 10068 7407.5 10690 8614.3 5709 4278.1 8719.2 7322.5 6221.7 9608.6 7962.7 7631 9341.8 7649.5 7360.7 6985.1 8727.4 5780.2 10229 7487.3 10208 8176.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3328400 29749 59 27938 55877 45121 45121 1 9606 Homo sapiens -0.028523503232690928 VQTGEEGMPLSTIR Oxidation (M) 1532.7505 0.75045718 3773 Q00534 CDK6 Cyclin-dependent kinase 6 yes yes 0 1 0 4 0 1 44.383 44.427 2 0.0023416 11493 20230619_1883_Aki_TMTPro18x_K_F4 83.182 68.365 23397 17856 17672 24638 23193 16125 15625 15777 17694 26880 27590 23092 24962 19290 20428 23193 23173 22280 21582 16406 18532 24198 23396 16973 16275 16455 18350 26438 27687 23486 25325 20242 21020 23187 22139 21174 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26359000 29750 3773 27939 55878 45122 45122 2455 1 9606 Homo sapiens 0.005391970496702925 VQTGEEGMPLSTIR Unmodified 1516.7555 0.75554256 3773 Q00534 CDK6 Cyclin-dependent kinase 6 yes yes 0 0 0 4.5 0.5 1 1 49.816 49.871 2 1.6612999999999998E-21 13928 20230619_1883_Aki_TMTPro18x_K_F4 220.53 184.02 69527 52478 63495 68023 44504 54477 56778 47953 49938 80478 75158 68178 92641 69277 61302 91389 81838 81987 64212 48187 64740 67233 48092 55968 56373 50367 52412 79178 76613 69841 92442 72641 64187 90863 78105 77971 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91015000 29751 3773 27939 55879;55880 45123 45123 1 9606 Homo sapiens 0.017835009123018608 VQTLSNQPLLK Unmodified 1239.7187 0.71868677 2414 B3KTJ9;Q8N163-2;Q8N163;H0YC69;E5RFJ3;H0YC58;E5RGU7 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 2.5 0.5 1 1 53.157 53.203 3 8.599E-05 15543 20230619_1882_Aki_TMTPro18x_K_F3 121.02 73.017 187960 154110 185250 183070 200080 229730 219120 208340 258060 246560 231010 255610 273220 230480 230630 287100 241930 273960 173780 141340 188640 183150 207270 228270 220990 215330 259710 247470 240290 258180 275490 241550 236220 286710 231590 260230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1167400000 29752 2414 27940 55881;55882 45124;45125 45125 2 9606 Homo sapiens 0.10841617148707883 VQVALGNISSK Unmodified 1114.6346 0.63462279 3320 O75935-3;O75935;X6RA56;X6RCK5;A0A0A0MRV8;Q8NB28;X6RLR1;O75935-2 DCTN3 Dynactin subunit 3 yes no 0 0 0 2.5 0.5 1 1 53.129 53.175 3 1.9858E-06 15566 20230619_1882_Aki_TMTPro18x_K_F3 154.15 111.03 220670 179140 218630 215710 226690 259900 261950 240320 289010 266110 256600 246790 246960 201620 257330 303890 275270 259710 204020 164320 222410 215460 235850 259000 262850 247570 291580 267010 264370 250010 252840 214870 262740 301120 263100 247200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 474730000 29753 3320 27941 55883;55884 45126 45126 1 9606 Homo sapiens 0.081890860518115 VQVEYKGETK Unmodified 1179.6136 0.61355299 3430;2926 P11142;V9HW22;E9PKE3;Q53GZ6;Q96IS6;B3KTV0;P11142-2;Q53HF2;E9PN89;B4DTX2;E9PLF4;P54652;A0A024R6B5;E9PQK7;E9PQQ4;A0A384MDT7;E9PPY6;E9PN25;E9PK54 HSPA8;HEL-S-72p;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 no no 0 0 1 6.5 1.12 1 1 1 1 42.44 42.504 3 0.0003055 10494 20230619_1888_Aki_TMTPro18x_K_F8 117.09 93.942 3132800 2332900 3121300 2995400 4455600 3569500 3553200 3572400 3612400 3563500 4089900 2738100 3589300 2504000 3421000 2233300 3255900 1815700 2895100 2142000 3189100 2978800 4487000 3569400 3637800 3647900 3696800 3576500 4142700 2811500 3666100 2579100 3465300 2230300 3106800 1734300 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 6226199999.999999 29754 3430;2926 27942 55885;55886;55887;55888 45127;45128;45129;45130 45130 4 9606 Homo sapiens 0.03093075952278923 VQVPNMQDK Oxidation (M) 1073.5175 0.51754412 146 A0A024R1K8;Q15459;Q15459-2;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 1 0 6 0 1 41.022 41.116 3 0.003601 10006 20230619_1886_Aki_TMTPro18x_K_F6 73.233 45.462 80976 53448 72672 81684 101070 107860 107430 102280 122850 102550 108600 113670 115400 92289 98729 126170 123750 114010 74723 49199 75011 80468 102900 106910 108360 104870 123670 104000 112420 114200 116770 97691 102220 125480 118090 108450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63335000 29755 146 27943 55889 45131 45131 67 1 9606 Homo sapiens -0.01627395159448497 VQVPNMQDK Unmodified 1057.5226 0.5226295 146 A0A024R1K8;Q15459;Q15459-2;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 7 0 1 47.714 47.803 3 0.0025957 12641 20230619_1887_Aki_TMTPro18x_K_F7 86.624 68.313 79596 61116 68089 71563 74791 85684 81403 78897 103130 84388 90505 86832 109070 87056 92445 107380 122500 97447 73484 56058 70253 71609 77420 85417 82346 81216 103290 85129 94231 88114 109940 90880 96023 106990 116740 92753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140080000 29756 146 27943 55890 45132 45132 1 9606 Homo sapiens -0.0038309129683966603 VQVQDNEGCPVEALVK Unmodified 1783.8774 0.87744861 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 0 4 0.816 1 1 1 55.633 55.671 3 4.9642E-08 16508 20230619_1883_Aki_TMTPro18x_K_F4 123.72 111.57 242630 161330 190450 203000 261950 276370 263510 231590 247040 284870 291050 302540 279540 256140 278730 282160 302540 330880 223690 148180 198960 202500 266410 272900 265010 241140 254580 285530 296190 304640 285740 267120 284790 285850 289440 313650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 665050000 29757 3484 27944 55891;55892;55893 45133;45134;45135 45134 3 9606 Homo sapiens 0.01686498203980591 VQVTSQEYSAR Unmodified 1266.6204 0.62042929 120 A0A024R104;Q12860-2;Q12860 CNTN1 Contactin-1 yes no 0 0 0 5.5 0.5 1 1 38.777 38.864 2 2.0954E-08 9070 20230619_1885_Aki_TMTPro18x_K_F5 171.63 148.1 55133 56085 59202 53138 18625 26488 28383 25869 34344 58659 96782 91400 73304 79206 74127 78993 107600 92597 51089 51299 59134 53623 22870 28847 28364 27433 37115 58484 95283 90914 75720 82007 77230 80142 102520 87860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139210000 29758 120 27945 55894;55895 45136 45136 1 9606 Homo sapiens -0.002216111671486942 VQVVDEEGDQQHQEGK Unmodified 1823.8286 0.82858416 1546 A0A494C1G8;Q86TP0;Q8WWU2;Q8WWU3;A0A494C0Z6;Q59FX5;H0Y6K5;A0A494C070;H0Y7L6;B7ZLN9;Q02447-4;Q02447-3;Q02447-5;Q02447-6;Q02447-2;Q02447 SP3 Transcription factor Sp3 yes no 0 0 0 1.5 0.5 1 1 39.322 39.355 3 3.7883E-26 9796 20230619_1880_Aki_TMTPro18x_K_F1 236.31 217.48 38126 24986 29801 38317 43790 44478 41321 41786 57613 45657 48375 55534 48355 41195 42694 48556 56424 49515 35147 23002 31224 37650 44331 44439 42287 42979 57373 46256 50105 55411 49104 43347 44300 48717 53805 47045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113310000 29759 1546 27946 55896;55897 45137 45137 1 9606 Homo sapiens -0.05037698831392845 VQVVGTYR Unmodified 920.50797 0.50796571 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 1.5 0.5 1 1 41.427 41.465 2 0.0047626 10718 20230619_1880_Aki_TMTPro18x_K_F1 115.49 72.58 606760 492080 526870 516730 594770 682580 614960 597500 748150 537420 515580 476290 509540 434160 550410 577360 612610 471210 560410 450810 542850 522250 613560 675790 622800 614570 744850 545010 539560 485210 522420 456700 562500 571930 584560 449200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 417380000 29760 1104 27947 55898;55899 45138;45139 45138 2 9606 Homo sapiens 0.04453204617323081 VQVWFQNR Unmodified 1075.5563 0.55631289 3223;1201;4391 O14813;A0A5A4PVW8;Q99453;Q9H161;V9HWA7;A0A087WVB7;Q6IT45;A0A0A7EPG2;A0A3B3IS30;A6NLG4;A6NNA5;O60902;Q8N693;A0A024R385;Q96IS3;O60902-3;Q9Y2V3;O95076;Q15699;Q5XKR4;O60902-2;O15266;O15266-2;A6NJT0;Q96QS3;A0A140VJS2;Q99811;Q5ISC7;G3V2N3;P54821-2;P54821 PHOX2A;PHOX2B;ALX4;HEL23;SHOX2;UNCX;DRGX;ESX1;SHOX;RAX2;RAX;ALX3;ALX1;OTP;ARX;PRRX2;PRRX1 Paired mesoderm homeobox protein 2A;Paired mesoderm homeobox protein 2B;Homeobox protein aristaless-like 4;Dorsal root ganglia homeobox protein;Short stature homeobox protein 2;Homeobox protein ESX1;Homeobox protein ESX1-N;Homeobox protein ESX1-C;Retina and anterior neural fold homeobox protein 2;Retinal homeobox protein Rx;Homeobox protein aristaless-like 3;ALX homeobox protein 1;Homeobox protein orthopedia;Short stature homeobox protein;Homeobox protein unc-4 homolog;Homeobox protein ARX;Paired mesoderm homeobox protein 2;Paired mesoderm homeobox protein 1 no no 0 0 0 5 0 1 53.733 53.803 2 0.001101 15369 20230619_1885_Aki_TMTPro18x_K_F5 148.98 113.35 166700 154760 123460 118070 253330 398250 181780 197430 360050 36204 32219 38739 45619 39515 65076 50644 41263 42655 153940 141380 131080 125880 252410 376560 192570 210980 342650 46202 49109 39396 47221 41306 64437 50318 39720 40593 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 185860000 29761 3223;4391;1201 27948 55900 45140 45140 1 9606 Homo sapiens 0.021556982572064953 VQVYQEPNR Unmodified 1131.5673 0.5672715 16 E7EPA1;B2R7R5;A0A024QYY3;O60256-3;O60256;C9K0K7;C9JDU5;C9JJS3;I3L331;I3L164;C9JDH0;E7EW35 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes no 0 0 0 4.5 0.5 1 1 38.436 38.504 2 1.0906E-05 8917 20230619_1885_Aki_TMTPro18x_K_F5 171.73 136.44 105160 75649 94730 106880 111940 128360 124280 115570 147140 94332 125730 116380 108310 90537 123030 122380 138390 101930 97087 69543 97451 105600 115320 127820 125240 118420 147500 97244 129210 116390 111820 95874 125680 121340 132010 97165 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 89416000 29762 16 27949 55901;55902 45141;45142 45142 2 9606 Homo sapiens 0.006750558408384677 VQWYPEGVK Unmodified 1104.5604 0.56039521 4481 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 8 0 1 54.547 54.614 3 0.055397 15539 20230619_1888_Aki_TMTPro18x_K_F8 55.567 30.775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29763 4481 27950 55903 45143 45143 1 9606 Homo sapiens 0.012297429602767807 VQYAPERPGPQPTAETTR Unmodified 1996.9967 0.99665254 2004 P49407;P49407-2;A8K103;E9PM35 ARRB1 Beta-arrestin-1 yes no 0 0 1 5.5 0.5 1 1 37.551 37.635 3 1.2567E-13 8554 20230619_1886_Aki_TMTPro18x_K_F6 153.82 139.12 78244 52444 56642 54282 33938 37377 47636 56272 64510 100240 92859 103590 114060 94677 60355 152370 137370 145240 72103 48078 58964 54518 37506 39557 47838 57337 66059 98971 94852 104760 113250 101010 67082 151470 130740 137990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 425430000 29764 2004 27951 55904;55905 45144;45145 45145 2 9606 Homo sapiens 0.038034081530440744 VQYPQSQACK Unmodified 1207.5656 0.56555694 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 8 0 1 40.634 40.626 3 0.00013097 9726 20230619_1888_Aki_TMTPro18x_K_F8 124.33 105.06 54857 29362 68495 67266 92529 103060 80788 84989 92540 34936 47350 41934 34666 33987 60593 24700 47459 35378 50719 27224 68805 65203 93873 100980 82480 86707 91610 38313 50172 42019 37056 34821 60228 25693 45451 33533 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59878000 29765 3881 27952 55906 45146 45146 1 9606 Homo sapiens -0.029923212394123766 VQYTLPDGSTLDVGPAR Unmodified 1787.9054 0.90537792 3577 P42025;Q13841 ACTR1B Beta-centractin yes no 0 0 0 7 0 1 58.898 58.947 2 2.5516E-09 17388 20230619_1887_Aki_TMTPro18x_K_F7 181.98 144.79 21104 19348 17503 20700 15470 17516 23746 18780 20281 22455 24765 22381 24645 22678 27728 26016 26037 32360 19502 17721 18074 20759 16449 17993 23346 19219 21036 22492 25191 22749 25311 23566 28041 26448 24972 30645 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33695000 29766 3577 27953 55907 45147 45147 1 9606 Homo sapiens 0.0429414445573002 VRDDVAEYK Unmodified 1093.5404 0.54038805 3871 Q13895;H7BY94 BYSL Bystin yes no 0 0 1 4 0 1 41.037 41.079 3 0.00085946 10008 20230619_1883_Aki_TMTPro18x_K_F4 101.12 56.546 166890 98664 129000 162470 168830 187150 158400 152470 238910 192570 217440 227920 236490 199530 183960 238320 258370 221330 153760 90956 134990 158990 172200 186500 162740 159280 237850 193710 224910 228830 238340 208750 192370 237770 246230 210540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128360000 29767 3871 27954 55908 45148 45148 1 9606 Homo sapiens -0.0026405277033063612 VRDDVAEYKR Unmodified 1249.6415 0.64149908 3871 Q13895;H7BY94 BYSL Bystin yes no 0 0 2 6 0 1 37.07 37.138 4 0.044831 8384 20230619_1886_Aki_TMTPro18x_K_F6 58.674 40.81 75272 81287 85988 86374 111920 94288 102480 90726 93373 99706 96866 63995 91919 58838 103080 72923 70540 48056 69823 74407 86819 86960 113630 94785 103580 93183 95858 99183 98829 66484 94313 61694 102650 71781 67651 45990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35474000 29768 3871 27955 55909 45149 45149 1 9606 Homo sapiens 0.02666398932365155 VRDIAIATR Unmodified 1013.5982 0.5981777 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q5T9A4;Q5T9A4-3;A0A5K1VW56;Q9H834;Q8N3E6 ATAD3A;ATAD3B;DKFZp761L1023 ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B yes no 0 0 1 1.33 0.471 2 1 38.155 38.218 3 0.00062747 8989 20230619_1881_Aki_TMTPro18x_K_F2 113.93 90.498 89444 75768 87497 90973 110170 94810 111650 114070 133650 102870 115100 101990 126090 95442 109440 124950 133920 120800 82710 69487 89384 90716 112490 96097 113150 114880 134090 104580 119340 103480 127500 100280 113010 124810 127810 114830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66677000 29769 4603 27956 55910;55911;55912 45150;45151;45152 45152 3 9606 Homo sapiens 0.0919225394576415 VRDIVPTLR Unmodified 1067.6451 0.64512789 1903 A1L0T0;M0R026;Q59GP4;E9PJS0;M0R1B5 ILVBL Acetolactate synthase-like protein yes no 0 0 1 3 0 1 45.223 45.299 3 3.3315E-05 11964 20230619_1882_Aki_TMTPro18x_K_F3 157.75 118.99 196730 164010 172340 166570 156490 167220 157830 156830 180380 160980 186420 158130 186180 150180 217110 180180 190050 204720 181740 150200 176780 168150 163890 168930 159860 161100 182660 162440 190870 160550 191400 156870 218530 182060 182210 194130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188820000 29770 1903 27957 55913 45153 45153 1 9606 Homo sapiens 0.11401113496890503 VRDNICGALAR Unmodified 1243.6455 0.6455386 2382 Q8TEX9-2;Q8TEX9;B3KQ33;Q59FI4;B3KPS9;B3KT38;B3KTB3;D3DS63;Q59H62;B3KSQ4;Q6I9Y8;B3KPY9;B4DXR7;H0YMR4;H0YN07 IPO4 Importin-4 yes no 0 0 1 1.5 0.5 1 1 39.07 39.103 3 0.0030684 9720 20230619_1880_Aki_TMTPro18x_K_F1 73.632 53.077 43819 30714 36466 35525 43207 43158 40459 40980 53066 42086 43442 37097 47439 36194 44783 46206 49169 39934 40426 28180 37742 35596 44278 43031 41340 42033 52944 42353 45158 37894 48144 37910 45830 45921 46938 38030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 153960000 29771 2382 27958 55914;55915 45154 45154 1 9606 Homo sapiens 0.03346165154425762 VRDTYLDTQVVGQTGVIR Unmodified 2019.0749 0.074902863 2503 B4DJK4;B4E0Q4;B4DZJ7;O00267-2;O00267 SUPT5H Transcription elongation factor SPT5 yes no 0 0 1 8 0 1 50.154 50.23 3 1.1008E-38 13656 20230619_1888_Aki_TMTPro18x_K_F8 258.38 220.83 31685 27878 30887 36029 32842 38295 37301 31921 36541 38466 39041 39647 42193 37978 40971 42488 52526 50022 29306 25583 31508 35730 34085 38402 37320 33251 37387 38568 40091 40138 42932 39474 42326 43040 50128 47440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79724000 29772 2503 27959 55916 45155 45155 1 9606 Homo sapiens 0.10612840738258456 VRDVFEAK Unmodified 962.51853 0.5185304 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5;B7Z1G4;Q6QE17 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 0 1 7 0.816 1 1 1 44.525 44.589 3 0.0010542 11137 20230619_1887_Aki_TMTPro18x_K_F7 121.73 80.704 205630 162020 191200 169330 162790 156560 181560 167100 203010 207270 222430 196060 216210 162610 221890 241390 231140 200650 189990 148440 194810 170420 171710 159700 182720 171120 206390 206950 226890 198570 220990 173050 226140 238970 220850 191120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189120000 29773 1454 27960 55917;55918;55919 45156 45156 1 9606 Homo sapiens 0.03577187271753246 VRDVLDFYNVPIQDR Unmodified 1847.953 0.95299681 4236 Q8N5N7 MRPL50 39S ribosomal protein L50, mitochondrial yes yes 0 0 1 8 0 1 59.169 59.211 3 4.3634E-33 17461 20230619_1888_Aki_TMTPro18x_K_F8 207.55 190.86 73014 66681 80867 96549 88689 107560 59280 60358 54217 92987 97385 88465 106520 87444 92560 108520 107580 112890 67623 61261 81683 95088 90763 106820 61436 65841 57452 92072 98223 90026 107730 91385 95285 108900 102820 107150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39657000 29774 4236 27961 55920 45157 45157 1 9606 Homo sapiens 0.06293843446610481 VRDYLVR Unmodified 919.52395 0.52395013 155 A0A024R1S5;O00178;B2RDW9;F5H716;F5H257 GTPBP1 GTP-binding protein 1 yes no 0 0 1 2 0 1 39.062 39.128 3 0.016546 9405 20230619_1881_Aki_TMTPro18x_K_F2 89.298 36.128 154680 136590 145580 146970 145000 180500 129940 121820 166230 176870 196790 183600 193410 162660 173930 192840 198410 167580 143030 125120 148630 148020 150520 178660 133090 130030 168570 176070 200200 185410 196560 170030 178650 191870 189380 159550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146210000 29775 155 27962 55921 45158 45158 1 9606 Homo sapiens 0.06096910854239468 VREEEIEVDSR Unmodified 1359.663 0.66302238 3905 Q14978-3;B2RAU8;A0A0A0MRM9;Q14978;Q14978-2;Q96J17 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 0 0 1 1.5 0.5 1 1 36.975 37.005 3 1.2319E-10 8753 20230619_1880_Aki_TMTPro18x_K_F1 184.1 128.69 526390 429400 484530 510480 512310 551970 512710 504500 647010 615820 646820 664030 721370 566930 556890 757330 753400 636350 486410 393830 496200 509470 530170 554060 521170 521740 651630 618000 666810 668800 725930 598040 581080 750660 718140 606120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1820599999.9999998 29776 3905 27963 55922;55923 45159 45159 1 9606 Homo sapiens -0.002422608295773898 VREEIAEYQLR Unmodified 1404.7361 0.73612775 3607 P49454;Q9UHT7 CENPF Centromere protein F yes no 0 0 1 4 0 1 44.984 45.029 3 0.002261 11741 20230619_1883_Aki_TMTPro18x_K_F4 84.352 63.101 51541 44783 50378 52677 54692 54080 53342 52660 64547 63740 58273 55227 62025 49413 50283 57390 58297 52864 47668 41059 51339 52580 56399 54578 54215 54193 64909 63571 60213 56242 62609 51604 51817 57277 55664 50279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31758000 29777 3607 27964 55924 45160 45160 1 9606 Homo sapiens 0.04994912683673647 VREEILAK Unmodified 956.56548 0.56548059 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 0 1 6.5 0.5 1 1 42.468 42.552 3 0.0029819 10329 20230619_1887_Aki_TMTPro18x_K_F7 106.6 33.351 162880 126180 153050 155650 171590 165730 185960 189430 212040 172070 221910 196100 221480 190360 177300 225850 242030 190940 150480 115790 156560 154960 177000 167420 187490 191400 214730 175620 226970 198040 224030 198340 184880 224320 230590 181910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 376700000 29778 2350 27965 55925;55926 45161 45161 1 9606 Homo sapiens 0.0854604682289164 VREELIDKK Unmodified 1128.6503 0.65027285 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2;Q7L4K8 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 2 6.5 0.5 1 1 41.694 41.776 4 0.050679 10245 20230619_1886_Aki_TMTPro18x_K_F6 58.699 11.88 130100 132120 147970 117550 162180 131060 190390 142850 139860 160940 188060 117540 131670 87208 229210 94696 98880 80689 120620 120790 148830 120300 167480 132030 188710 145680 147260 160270 187960 120380 140430 91491 223420 94719 95741 76854 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 378670000 29779 1736 27966 55927;55928 45162 45162 1 9606 Homo sapiens 0.09109372568855179 VREEVPLELVEAHVK Unmodified 1745.9676 0.96758424 4016 Q58EY4;Q92922;Q05CR1;B4DYQ1;Q05BW5;B4DYF9 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 0 0 1 4.5 1.12 1 1 1 1 52.91 52.967 4 0.055122 15393 20230619_1883_Aki_TMTPro18x_K_F4 44.601 32.04 28770 23173 30435 29468 32677 33520 32935 35521 38554 28895 24790 27823 34211 28924 27946 26551 26638 34426 26613 21268 30803 29304 33752 33637 33370 35961 38407 29542 26516 28316 34319 29693 28448 27168 25553 32586 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1134100000 29780 4016 27967 55929;55930;55931;55932 45163 45163 1 9606 Homo sapiens 0.124439155947357 VREEYPDR Unmodified 1062.5094 0.50942227 983 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;G3V2A3 TUBB3 Tubulin beta-3 chain yes no 0 0 1 2 0.816 1 1 1 30.251 30.305 3 7.5966E-05 6085 20230619_1880_Aki_TMTPro18x_K_F1 156.83 115.8 273420 177390 234050 247800 235230 239820 225080 243980 284360 265880 321320 316900 304160 273430 277890 220280 347630 297990 252200 163130 241060 244330 244030 243230 229540 249580 287710 269110 327120 317750 309850 280700 286530 226810 331590 282390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 5075300000 29781 983 27968 55933;55934;55935 45164;45165;45166 45164 3 9606 Homo sapiens -0.019332060845954402 VREFNFEK Unmodified 1067.54 0.53999412 2144;1327 A0A1W6S962;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52 GTF2I General transcription factor II-I no no 0 0 1 7.5 0.5 1 1 46.354 46.417 3 0.00247 12073 20230619_1888_Aki_TMTPro18x_K_F8 110.53 36.372 608240 540420 591510 590060 624500 622050 641270 642570 650190 623300 691910 557150 611750 533280 607400 682910 689020 589190 562600 495100 602650 592590 645900 627450 646120 654490 663440 628940 703590 568550 626840 558660 622630 678440 657770 560970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 542290000 29782 1327;2144 27969 55936;55937 45167;45168 45168 2 9606 Homo sapiens 0.008925723004722386 VRELISDNQYR Unmodified 1391.7157 0.71572665 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 1 7 0 1 43.046 43.125 3 1.6653E-05 10520 20230619_1887_Aki_TMTPro18x_K_F7 133.05 109.67 72882 78014 76952 63072 89783 76312 70814 76464 77243 82310 88327 78645 85054 67698 82910 81259 85956 73836 67553 71265 77896 65221 91547 76311 72766 78223 78829 82738 89900 79665 86768 70925 84501 81043 82129 70253 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120630000 29783 1104 27970 55938 45169 45169 1 9606 Homo sapiens 0.03553742023905215 VREMEEEAEK Oxidation (M) 1264.5605 0.56053115 4183 Q86U42-2;Q86U42;Q92843-2;A0A7I2V383 PABPN1 Polyadenylate-binding protein 2 yes no 0 1 1 1 0 1 33.016 33.016 3 0.051425 7186 20230619_1880_Aki_TMTPro18x_K_F1 55.776 32.684 26378 16042 25340 25628 34806 29487 29501 33443 34843 30873 32896 32498 27365 29039 32980 26287 39727 32138 24344 14780 25959 25141 35200 29623 30227 33804 35112 31388 33609 32789 28421 29906 33768 26815 37893 30491 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17687000 29784 4183 27971 55939 45170 45170 2692 1 9606 Homo sapiens -0.0611666989270816 VRENNYTYEFDFSK Unmodified 1810.8162 0.81622856 3965 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase yes yes 0 0 1 7 0 1 52.768 52.838 3 0.0012295 14887 20230619_1887_Aki_TMTPro18x_K_F7 82.529 57.594 65836 62236 57455 64797 63415 72205 74029 67441 76747 73998 73521 68587 77582 66031 75587 86842 80266 73951 60871 56981 59206 65347 65709 72368 74088 69418 77912 74285 75746 69836 78965 69283 77216 86184 76709 70398 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66472000 29785 3965 27972 55940 45171 45171 1 9606 Homo sapiens -0.0567469050379259 VRENQVSIECDTTCK Unmodified 1837.8298 0.82984649 2201 B1Q2B0;Q6ZNB6;Q8J028 URCC5;NFXL1;HOZFP NF-X1-type zinc finger protein NFXL1 yes no 0 0 1 4 0 1 40.465 40.507 3 0.00018651 9782 20230619_1883_Aki_TMTPro18x_K_F4 94.461 72.263 20233 18572 25142 23158 27111 27728 23140 28935 26837 28293 31381 35944 30691 28367 29226 36599 39432 34332 18760 17034 25143 23080 27872 27724 23707 29440 27326 28846 31984 35885 31302 29924 30347 36499 37595 32651 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34839000 29786 2201 27973 55941 45172 45172 1 9606 Homo sapiens -0.05555524058445371 VREQSVQEIPVSR Unmodified 1525.8213 0.82125436 2779 CON__P06868 yes yes 0 0 1 6 0 1 37.986 38.062 3 0.001733 8755 20230619_1886_Aki_TMTPro18x_K_F6 65.038 47.294 + 27066 23959 26891 35174 47401 45304 40237 38098 51126 35000 44688 45668 34409 35431 39188 32367 101180 44888 25039 22017 27686 34699 47380 44881 41293 39345 51148 35898 45715 45514 35807 36707 43116 33303 95819 42709 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30179000 29787 2779 27974 55942 45173 45173 1 9606 Homo sapiens 0.07937658149512572 VREYELR Unmodified 963.51378 0.51377937 3733 Q5VVC8;Q08ES8;Q5VVD0;P62913-2;P62913 RPL11 60S ribosomal protein L11 yes no 0 0 1 5.5 1.12 1 1 1 1 35.302 35.368 3 0.0094276 7682 20230619_1883_Aki_TMTPro18x_K_F4 94.302 47.235 1117700 890870 962080 1073900 1262000 1292100 1180700 1170200 1424100 1148300 1266900 1136700 1311500 1077000 1102400 1448900 1531500 1121000 1032100 817250 995310 1072300 1284900 1287600 1202500 1203200 1430100 1162100 1308100 1153800 1327500 1132200 1150100 1430800 1458400 1069700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2712100000 29788 3733 27975 55943;55944;55945;55946 45174;45175;45176 45174 3 9606 Homo sapiens 0.030563031290057552 VRFQEAEERPK Unmodified 1387.7208 0.72081203 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72 HSPH1 Heat shock protein 105 kDa yes no 0 0 2 6 0 1 36.167 36.227 4 0.048895 8048 20230619_1886_Aki_TMTPro18x_K_F6 55.452 37.535 49431 57573 55142 49681 70157 53296 50531 61759 57135 59471 54080 39766 56499 32201 50717 63581 59271 40552 45872 52603 55689 50952 70959 53931 52347 62391 57783 59594 55636 41092 57215 35181 52211 62058 56498 38829 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62634000 29789 769 27976 55947 45177 45177 1 9606 Homo sapiens 0.042460458864979955 VRGEVAPDAK Unmodified 1040.5615 0.56145784 1431 A0A384MR27;P09382;F8WEI7;A0A0B6XK00 LGALS1 Galectin-1 yes no 0 0 1 5 0.816 1 1 1 35.091 35.154 3 0.00061992 7591 20230619_1885_Aki_TMTPro18x_K_F5 90.697 58.763 638060 319800 832520 841980 1812500 1817500 1410900 1676900 1422600 837630 1258500 1403800 1266500 1083600 1172000 520610 1302700 1192000 590060 297450 844440 818990 1792000 1759300 1446000 1698500 1440200 909250 1300500 1387400 1287900 1099200 1196800 572210 1244400 1125500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3470799999.9999995 29790 1431 27977 55948;55949;55950 45178 45178 1 9606 Homo sapiens 0.04279957329163153 VRIDEYDYSK Unmodified 1286.6143 0.61428128 21 A0A024QZ30;P31040;P31040-2;D6RFM5;B3KT34;Q0QF12;P31040-3;B3KYA5 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 1 5 0 1 46.025 46.102 3 0.00015946 12101 20230619_1885_Aki_TMTPro18x_K_F5 126.76 102.91 302550 230680 279050 315800 328260 401710 317180 312700 410630 353410 352240 405630 441400 351640 277480 501500 496690 479290 279460 211930 286420 312860 337310 397480 323300 326720 410750 356810 368180 407700 440000 372470 298360 499580 472990 455530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196040000 29791 21 27978 55951 45179 45179 1 9606 Homo sapiens -0.017561293986773308 VRIDEYDYSKPIQGQQK Unmodified 2066.0433 0.043268383 21 A0A024QZ30;P31040;P31040-2;D6RFM5;B3KT34;Q0QF12;P31040-3;B3KYA5 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 2 8 0 1 46.999 47.048 4 1.4239E-06 12302 20230619_1888_Aki_TMTPro18x_K_F8 116.78 90.955 34406 39056 52657 48879 58439 45087 57867 46031 22175 43266 55680 31478 29761 21516 73175 19347 21527 16723 32031 35800 52018 48522 59923 45961 57309 46930 25997 43443 54353 32197 33148 22433 70498 19514 21063 15929 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17231000 29792 21 27979 55952 45180 45180 1 9606 Homo sapiens 0.0528884798436593 VRIEGDNENKLPR Unmodified 1538.8165 0.81650333 1029 A0A0F7KYT8;A0A8V8TMQ1;P51114;A0A0F7L1S3;B4DXZ6;A0A0F7L0Q8;A0A8V8TNP6;P51114-2;E9PFF5;P51114-3;B4DM21;B4DM78;B4DGH9;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 2 6.5 0.5 1 1 39.117 39.191 4 0.00018652 8889 20230619_1887_Aki_TMTPro18x_K_F7 100.11 77.579 150090 137770 146430 159580 181030 152080 162110 149240 154250 168220 181360 131580 152090 103690 167540 122410 123630 85579 138860 126270 149580 159300 184360 154470 164340 153220 158750 167820 183230 134380 156620 108960 167410 120840 118450 81813 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 390860000 29793 1029 27980 55953;55954 45181;45182 45182 2 9606 Homo sapiens 0.0686477400674903 VRPCVVYGGADIGQQIR Unmodified 1886.9785 0.97850006 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;Q5S4N1;B4E010 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 1 2 0 1 47.028 47.104 3 7.1183E-30 13096 20230619_1881_Aki_TMTPro18x_K_F2 224.64 200.55 252880 208400 241550 254130 245140 279760 272460 263910 301070 278800 273060 253350 302950 242060 264360 312200 307280 283200 233760 191180 246460 253240 255180 280580 274020 271120 304010 280270 282660 258130 306360 253840 272120 310850 293420 269380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 250110000 29794 1018 27981 55955 45183;45184 45183 2 9606 Homo sapiens 0.07048994697379385 VRPDYTAQNLDHGK Unmodified 1612.7958 0.79576789 1952 A4UCR9;C9JJ19;P82930 MRPS34 28S ribosomal protein S34, mitochondrial yes no 0 0 1 7 0 1 38.171 38.234 4 2.025E-11 8549 20230619_1887_Aki_TMTPro18x_K_F7 179.94 146.64 159330 125000 157530 161850 200960 229740 190490 176010 193650 201490 204080 203400 228990 200720 193100 252800 241380 223440 147280 114760 160870 161260 205060 225890 192760 184200 197660 202390 209980 206420 231300 209820 199980 251400 230360 212600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 308490000 29795 1952 27982 55956 45185 45185 1 9606 Homo sapiens 0.013881836270684289 VRPGFCFHLCSR Unmodified 1534.7286 0.72855672 3811 Q08211;B3KU66 DHX9 ATP-dependent RNA helicase A yes no 0 0 1 8 0 1 43.574 43.584 4 0.00047279 10910 20230619_1888_Aki_TMTPro18x_K_F8 79.875 62.663 104860 88563 85677 94753 119380 137840 126930 124870 173110 45165 42997 36719 39996 29831 43141 49562 40433 38937 96832 81137 89220 95767 121710 135800 128800 126310 168120 49915 50072 37542 41106 32053 43701 48872 38702 37100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75683000 29796 3811 27983 55957 45186 45186 1 9606 Homo sapiens -0.01741841389207366 VRPLLPSELER Unmodified 1307.7561 0.75613491 3349 O95235;D6R9E4;D6RBN1 KIF20A Kinesin-like protein KIF20A;Kinesin-like protein yes no 0 0 1 7.5 0.5 1 1 47.065 47.133 3 0.0020564 12369 20230619_1888_Aki_TMTPro18x_K_F8 81.494 43.137 58536 51564 58159 60271 57601 74071 65258 53346 73780 73978 59371 61901 72949 58326 63470 75507 62667 58492 54150 47271 59132 60324 60169 73367 65589 56513 74168 73329 62209 63246 73547 61193 64728 74623 59938 55751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101660000 29797 3349 27984 55958;55959 45187 45187 1 9606 Homo sapiens 0.11456708414311834 VRTELADK Unmodified 930.51345 0.51344502 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;Q86XU5 MYH9 Myosin-9 yes no 0 0 1 6 0 1 37.844 37.92 3 0.01403 8690 20230619_1886_Aki_TMTPro18x_K_F6 74.162 18.595 195570 113430 215880 179700 315010 286360 270210 285960 291670 224870 321690 263330 293830 226990 283960 123690 326730 249910 180670 104530 218820 177450 317600 281480 275760 290340 296810 231780 327040 264330 300110 230190 290330 133600 311670 236310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 224740000 29798 148 27985 55960 45188 45188 1 9606 Homo sapiens 0.04540883409140406 VRVDLPDK Unmodified 940.53418 0.53418046 1936 H7C4M9;C9JZG9;C9JZY6;A4D1L5;P62256-2;P62256;C9J8Q9 UBE2H Ubiquitin-conjugating enzyme E2 H yes no 0 0 1 7 0 1 44.713 44.798 3 0.05126 11251 20230619_1887_Aki_TMTPro18x_K_F7 59.153 18.124 195270 86105 153750 180980 147290 162900 174710 186840 264740 244010 238170 286290 315050 287740 146860 388150 342850 354940 179720 79812 159700 174570 154520 166490 177350 190760 263590 244930 249020 288870 311490 301900 164450 385820 326220 337430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84338000 29799 1936 27986 55961 45189 45189 1 9606 Homo sapiens 0.0615347378881097 VRVDPDGR Unmodified 912.47773 0.47772821 2834 D3DWL9;Q10570;B4DEF4 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes no 0 0 1 3.5 0.5 1 1 30.866 30.93 3 0.023761 5969 20230619_1882_Aki_TMTPro18x_K_F3 66.299 47.028 56838 29395 60161 70066 84972 83801 70058 75690 74455 58900 82075 85612 76632 67056 77603 38636 101130 81711 52461 27280 61255 67498 85806 83452 71665 77438 75846 61252 83649 84997 78458 68322 79958 41832 96398 77224 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25427000 29800 2834 27987 55962;55963 45190;45191 45190 2 9606 Homo sapiens 0.017988459521461664 VRVEALQSGGGQER Unmodified 1484.7696 0.76955314 2222 Q5QP19;Q53FP3;B2R5S3;Q9Y697-2;Q9Y697;B4DNL7;Q9Y697-3 NFS1 Cysteine desulfurase, mitochondrial yes no 0 0 1 6 0 1 36.243 36.303 3 1.5131E-11 8049 20230619_1886_Aki_TMTPro18x_K_F6 175.08 136.06 29824 25350 29203 32485 34195 32680 37600 34448 37672 37684 40917 42737 46226 39875 33876 44859 46945 33668 27579 23264 29810 32222 35166 33085 37709 35171 38512 38065 42062 43063 46437 41462 35441 44352 44699 32145 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 92828000 29801 2222 27988 55964 45192 45192 1 9606 Homo sapiens 0.04655914455634047 VRVELSNGEK Unmodified 1129.6091 0.60913632 2236 B2R6F3;P84103-2;P84103 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 yes no 0 0 1 7 0.816 1 1 1 40.129 40.178 3 0.00010405 9579 20230619_1886_Aki_TMTPro18x_K_F6 134.2 107.1 501620 389850 493820 479190 605180 667010 563250 563260 712700 617600 658990 647940 735830 546550 574630 709050 689370 638950 463630 357740 503870 479060 618920 657840 574940 583880 715390 622460 681730 653170 740450 575960 594210 705630 658130 607810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 594690000 29802 2236 27989 55965;55966;55967 45193;45194 45193 2 9606 Homo sapiens 0.049516115293727125 VRVELSTGMPR Unmodified 1243.6707 0.67069072 981 A0A0B4J1Z1;B4DEK2;C9JAB2;Q16629-3;Q16629-2;Q16629-4;Q16629;Q8NB80 SRSF7 Serine/arginine-rich splicing factor 7 yes no 0 0 1 4 1.41 1 1 1 1 1 43.053 43.126 3 4.0137E-06 10882 20230619_1883_Aki_TMTPro18x_K_F4 146.36 116.02 340430 297220 336340 322040 329110 347200 347790 347080 409660 341630 336980 322930 381550 299840 340840 364880 416720 354590 314880 272300 341770 323730 342870 349340 351560 354430 410860 345130 351030 328020 386010 313630 351590 365000 397550 337130 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 393370000 29803 981 27990 55968;55969;55970;55971;55972 45195;45196;45197;45198 45196 4 9606 Homo sapiens 0.0586021995700321 VRYDSSNQVK Unmodified 1194.5993 0.59929991 2349 B3KMA8;K7EIE8;O95983-2;O95983;A0A0A0MTS6;A0A087WT34;A0A087X1H1;A0A087WZ12 MBD3 Methyl-CpG-binding domain protein 3 yes no 0 0 1 7.5 0.5 1 1 35.932 35.961 3 0.00035032 7844 20230619_1888_Aki_TMTPro18x_K_F8 115.29 79.873 49635 25282 58916 56737 86723 81613 63604 82928 74836 54388 75144 64845 71402 55152 80060 30297 73224 58490 45859 23439 59458 54994 87138 80628 65878 83780 75553 56825 76874 65020 73343 55965 80591 32599 70024 55310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80458000 29804 2349 27991 55973;55974 45199 45199 1 9606 Homo sapiens 0.009784235239976624 VSADNTVGR Unmodified 917.45666 0.45665842 2403 B4DMT5;H0YDT6;B3KSH1;O00303;B4DEW9 EIF3F Eukaryotic translation initiation factor 3 subunit F yes no 0 0 0 3.5 0.5 1 1 32.594 32.658 2 0.00024096 6582 20230619_1883_Aki_TMTPro18x_K_F4 145.72 106.76 32781 15801 45808 49740 57904 72098 46835 61654 57118 43773 66453 80961 54263 53669 64258 29555 79503 78542 30333 14760 45663 47649 58937 70862 48240 63193 57905 46326 67323 79471 56303 55000 65806 32944 75913 74084 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 44707000 29805 2403 27992 55975;55976 45200 45200 1 9606 Homo sapiens -0.00537164147385738 VSADSFVR Unmodified 879.44503 0.4450311 4701 Q9Y248;Q53G08 GINS2 DNA replication complex GINS protein PSF2 yes no 0 0 0 6 0 1 44.07 44.162 2 8.3339E-09 11304 20230619_1886_Aki_TMTPro18x_K_F6 159.2 133.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29806 4701 27993 55977 45201 45201 1 9606 Homo sapiens 0.00048638829287028784 VSAEVCEAVFK Unmodified 1237.6013 0.60127375 2770 CON__ENSEMBL:ENSBTAP00000034412 yes yes 0 0 0 5 0 1 56.491 56.553 3 0.070225 16479 20230619_1885_Aki_TMTPro18x_K_F5 51.727 41.269 + 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29807 2770 27994 55978 45202 45202 1 -0.00802283782422819 VSALDLAVLDQVEAR Unmodified 1597.8675 0.86753585 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4H4;A0A7I2V4Y9;B3KTX4;A8K8J9;F8W1I6;H0YHL1 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 0 0 5 0 1 63.28 63.325 3 2.5065E-08 19450 20230619_1885_Aki_TMTPro18x_K_F5 141.85 114.2 74000 72836 68468 78265 69074 70196 72580 71781 78403 96929 78581 71611 94111 83579 81609 102300 89438 93193 68470 66696 70067 78515 71759 71693 73179 73900 79698 95830 81252 74281 94994 86812 83753 101930 85524 88598 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 708500000 29808 1406 27995 55979 45203 45203 1 9606 Homo sapiens 0.09251678260920926 VSANKGEIGDATPFNDAVNVQK Unmodified 2273.1288 0.12878893 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 1 7 0 1 53.061 53.131 4 7.7854E-08 14964 20230619_1887_Aki_TMTPro18x_K_F7 103.27 93.073 28173 25343 30009 30783 35426 33011 34082 31355 33310 32892 36641 27316 31561 23885 34746 28323 27244 20781 26081 23240 30411 30674 36269 33195 34421 32195 34112 32989 37162 27894 32488 24992 34825 27998 26095 19842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66932000 29809 2484 27996 55980 45204 45204 1 9606 Homo sapiens 0.04314968379367201 VSAPEEQFTR Unmodified 1162.5619 0.56185177 4134 Q6UW63 KDELC1 KDEL motif-containing protein 1 yes yes 0 0 0 3 0 1 42.425 42.491 2 0.0013371 10677 20230619_1882_Aki_TMTPro18x_K_F3 132.22 111.89 94408 82248 90215 102980 119920 142090 111680 124380 160860 122140 147880 161080 147360 125470 120270 151090 145210 165110 87300 75454 92532 102780 122170 140270 114600 128180 160430 124820 152350 160550 149150 131950 124340 152120 138830 156600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114020000 29810 4134 27997 55981 45205 45205 1 9606 Homo sapiens -0.012926677416317034 VSAPGVLTAQDR Unmodified 1212.6463 0.64625011 319 A0A024R542;Q9C0C2;B3KXS7;Q9C0C2-2;A0A2R8Y5C4 TNKS1BP1 182 kDa tankyrase-1-binding protein yes no 0 0 0 6 0 1 44.946 45.035 2 0.0030755 11710 20230619_1886_Aki_TMTPro18x_K_F6 117.99 67.02 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29811 319 27998 55982 45206 45206 1 9606 Homo sapiens 0.04843283075138061 VSAQEVR Unmodified 787.41882 0.41881635 3456 P15311;Q6NUR7;B2R6J2;V9HW42;J7M2B1 EZR;HEL-S-105;EZR-ROS1 Ezrin;Tyrosine-protein kinase receptor yes no 0 0 0 3 0.816 1 1 1 32.001 32.067 2 0.0082438 6392 20230619_1882_Aki_TMTPro18x_K_F3 120.92 63.641 33418 19634 40077 47040 75631 66855 49837 64000 54631 34003 50674 45078 41263 39989 58802 21227 61704 51958 30897 18211 40711 45447 74906 66009 51921 64724 55165 36331 51766 45094 43284 40450 59426 23477 58942 49060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24183000 29812 3456 27999 55983;55984;55985 45207 45207 1 9606 Homo sapiens 0.016603696578158633 VSASPLLYTLIEK Unmodified 1432.8177 0.81773211 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLK7;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 2.5 0.5 1 1 63.987 64.007 3 3.596E-06 20119 20230619_1882_Aki_TMTPro18x_K_F3 131.69 105.57 352210 244050 319570 294620 237170 265030 224960 191160 252310 261530 226180 175960 221440 186620 227380 286670 232600 219180 325120 224010 325830 293060 252710 268660 228600 202520 254670 258060 232790 183120 226450 197440 231730 282500 222400 208950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1040199999.9999999 29813 1817 28000 55986;55987 45208 45208 1 9606 Homo sapiens 0.11863595322938636 VSASTVPTDGSSR Unmodified 1262.6103 0.61025853 4167 Q7Z434-4;Q7Z434 MAVS Mitochondrial antiviral-signaling protein yes no 0 0 0 5 0 1 36.31 36.401 2 1.4889E-07 8046 20230619_1885_Aki_TMTPro18x_K_F5 192.38 164.64 16080 7413.6 19162 18498 21556 28666 20428 25632 27166 16208 26892 31310 24950 19590 25755 9590.5 27643 30887 14852 6891.5 19247 17882 22213 28104 20887 26127 27227 17354 27551 30666 25550 20096 26187 11042 26453 29099 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20605000 29814 4167 28001 55988 45209 45209 1 9606 Homo sapiens -0.010542188924091533 VSASVAEVQEQYTER Unmodified 1694.8111 0.81114318 1616 Q27J81;Q27J81-2;A0A6Q8PHA2;A0A6Q8PH71;A0A6Q8PHG2;A0A6Q8PGN3;A0A6Q8PF44;A0A6Q8PH25;A0A6Q8PF29;A0A087X118;A0A6Q8PFW4;A0A6Q8PGC7;A0A0A0MQU1;A0A6Q8PHS8;A0A6Q8PH63 INF2 Inverted formin-2 yes no 0 0 0 3 0 1 49.496 49.574 3 6.6047E-14 13956 20230619_1882_Aki_TMTPro18x_K_F3 151.56 129.36 142730 122270 143620 164210 176220 197050 156270 176420 221250 148200 168720 155530 149770 131700 133720 158260 157130 148070 132030 112260 146430 162750 180070 196250 160750 180850 219390 151670 174610 156850 152770 138000 137680 157980 150050 140780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167850000 29815 1616 28002 55989 45210 45210 1 9606 Homo sapiens -0.008469943663612867 VSCLGVTDDGMAVATGSWDSFLK Oxidation (M) 2431.1036 0.10356173 3730;1179 Q6FHM2;P62879;E7EP32;P62879-2;B2R6K4;A0A140VJJ8;P62873;F6X3N5;A0A2L0WW42;A0A994J3T6;Q71UM6;B3KVK2;Q71UM7 GNB2;GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 1 0 6.5 0.5 1 1 63.591 63.632 3 3.3876E-07 19782 20230619_1886_Aki_TMTPro18x_K_F6 96.848 88.139 13124 10557 13648 13277 10021 12233 10658 11216 12844 14512 14622 14963 14309 13662 15469 14419 12905 19929 12138 9688 13761 13174 10725 12425 10791 11620 13041 14502 14911 15120 14674 14179 15566 14788 12420 18844 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 420120000 29816 3730;1179 28003 55990;55991 45211 45211 723 1 9606 Homo sapiens -0.05474590529684065 VSCLGVTDDGMAVATGSWDSFLK Unmodified 2415.1086 0.10864711 3730;1179 Q6FHM2;P62879;E7EP32;P62879-2;B2R6K4;A0A140VJJ8;P62873;F6X3N5;A0A2L0WW42;A0A994J3T6;Q71UM6;B3KVK2;Q71UM7 GNB2;GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 0 7.5 0.5 1 1 64.679 64.702 3 1.5374E-44 19968 20230619_1887_Aki_TMTPro18x_K_F7 238.68 213.6 126170 102060 124090 141440 85095 100240 122500 117660 118730 139430 142180 149640 163510 144100 137620 165950 159010 170360 116640 93760 125750 139050 92493 104870 121310 119680 122190 140000 145760 151270 165010 149960 141730 166580 152020 161720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 981540000 29817 3730;1179 28003 55992;55993 45212 45212 1 9606 Homo sapiens -0.04230286667097971 VSCLGVTDDGMAVATGSWDSFLR Unmodified 2443.1148 0.11479512 4542 Q9HAV0;A0A7I2S2S9;A8K3F6;A0A6Q8PG88;B4DLV5 GNB4 Guanine nucleotide-binding protein subunit beta-4 yes no 0 0 0 7.5 0.5 1 1 64.536 64.561 3 2.7571E-19 19913 20230619_1887_Aki_TMTPro18x_K_F7 151.21 143.41 10345 10058 13669 10977 10716 12441 7443.6 11004 16436 14390 13729 11757 19472 12010 10892 15462 17887 14359 9602.7 9211.4 13542 11039 11295 12440 7993.1 11419 16134 14291 14435 12073 19259 12586 11635 15407 17022 13663 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112860000 29818 4542 28004 55994;55995 45213 45213 1 9606 Homo sapiens -0.04903768435542588 VSDGDWICPDKK Unmodified 1418.65 0.65001485 3347 O95218-2;O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes no 0 0 1 6 0 1 50.162 50.239 3 1.7444E-05 13970 20230619_1886_Aki_TMTPro18x_K_F6 129.71 115.99 144730 123950 142880 147360 163970 196780 178930 178680 189870 193230 176130 160020 202390 142320 170640 173460 169640 149120 133850 113660 145680 147560 169160 194780 179870 184100 192380 193490 182390 163360 203990 149180 174020 172470 162170 141970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138760000 29819 3347 28005 55996 45214 45214 1 9606 Homo sapiens -0.04256415213330911 VSDGGSSSTDFK Unmodified 1185.515 0.51496116 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;H0Y659;Q5H935;A0A087X146 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 4 0 1 42.716 42.76 2 1.5028E-06 10763 20230619_1883_Aki_TMTPro18x_K_F4 154.24 109.79 21310 8922.5 25245 25346 30180 37060 21415 26908 28486 22518 39951 43414 29545 33746 34154 19399 38189 47206 19675 8322.6 25389 24358 30757 36305 22356 28066 29028 23642 40021 42765 30756 34359 34791 21330 36562 44509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7948500 29820 594 28006 55997 45215 45215 1 9606 Homo sapiens -0.07037572083436316 VSDGSLLYNAGNICNHFFTR Unmodified 2284.0695 0.069499909 2412 B3KTC8;B7ZKJ7 UAP1L1 yes no 0 0 0 3 0 1 61.043 61.072 3 4.8796E-05 18831 20230619_1882_Aki_TMTPro18x_K_F3 63.608 58.028 178530 153360 180500 221080 174540 221150 205170 208380 227610 248970 238420 260210 261130 217530 216410 286310 254040 282040 165150 140920 183390 217570 182810 223190 205840 214890 231200 249730 245220 262160 263660 229450 223320 286150 242890 267830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53690000 29821 2412 28007 55998 45216 45216 1 9606 Homo sapiens -0.021172061157358257 VSEDEELRK Unmodified 1103.5459 0.54586736 2375 Q5SZR4;B3KPI5;B4DZR8;Q9Y2W6-3;Q9Y2W6 TDRKH Tudor and KH domain-containing protein yes no 0 0 1 2.5 0.5 1 1 38.732 38.793 3 0.020039 9227 20230619_1881_Aki_TMTPro18x_K_F2 62.271 32.516 89131 50578 89572 104380 148770 150400 125850 155690 171640 110490 163410 177880 148170 132450 146440 93046 172700 163820 82263 46794 91929 101490 149200 148610 129650 157370 171670 116200 167460 175870 151680 136070 150070 98292 164930 154880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121760000 29822 2375 28008 55999;56000 45217 45217 1 9606 Homo sapiens -0.0017637397852467984 VSEDLNQAFK Unmodified 1149.5666 0.5666028 4313 Q93034 CUL5 Cullin-5 yes yes 0 0 0 5 0 1 52.536 52.61 2 1.2701E-06 14883 20230619_1885_Aki_TMTPro18x_K_F5 175.73 126.02 47499 41476 49182 55419 44711 49138 53117 50545 58609 61546 67075 74000 64004 58863 60952 69883 71237 74818 43953 38075 49792 54729 47013 50198 53254 51867 59739 61975 68335 74019 65312 61777 62653 70301 68084 70997 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44252000 29823 4313 28009 56001 45218 45218 1 9606 Homo sapiens -0.002197835988681618 VSEEAESQQQWDTSK Unmodified 1750.7646 0.76458692 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;B4DIF8;Q01082-2;Q8WYB3;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 2.5 0.5 1 1 46.114 46.193 3 1.2915E-05 12660 20230619_1881_Aki_TMTPro18x_K_F2 98.654 90.053 113210 79563 88638 102970 99005 141410 137290 125500 187240 157640 161120 168690 177610 173960 126300 175440 211390 189580 104400 73078 92404 102530 103440 139610 137630 130160 186780 158070 167230 170890 178570 179270 134280 176940 201290 180000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 320340000 29824 2337;3778;3779 28010 56002;56003 45219;45220 45219 2 9606 Homo sapiens -0.08076478988346025 VSEEIEDIIK Unmodified 1173.6129 0.61288429 899 A0A090N7V5;O75223;M0QZK8;B3KMN7;O75223-3 C7orf24;GGCT Gamma-glutamylcyclotransferase yes no 0 0 0 3 0 1 61.691 61.72 3 0.00076977 19119 20230619_1882_Aki_TMTPro18x_K_F3 95.573 44.481 40064 31065 39482 39408 34973 45204 38069 41448 45219 40655 47555 50093 51084 39779 48222 50579 47454 58877 37029 28515 40091 39190 36830 45164 38455 42578 45738 41420 48856 50086 51858 41969 49061 51107 45490 55792 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39447000 29825 899 28011 56004 45221 45221 1 9606 Homo sapiens 0.033022365125589204 VSEEQTQPPSPAGAGMSTAMGR Unmodified 2187.9889 0.98886633 2829 D3DUZ3;Q16666;Q16666-3;Q16666-2;X6RHM1;H3BM18 IFI16 Gamma-interferon-inducible protein 16 yes no 0 0 0 4.5 0.5 1 1 46.232 46.293 3 1.1782E-05 12200 20230619_1885_Aki_TMTPro18x_K_F5 92.913 83.867 12572 9956.4 11684 13141 13084 17500 14416 15105 19999 16982 18662 19038 20407 17488 18427 19100 19219 19061 11616 9142.3 11977 13061 13552 17299 14629 15642 19995 17135 19287 19181 20679 18174 18820 19167 18379 18105 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64589000 29826 2829 28012 56005;56006 45222 45222 1 9606 Homo sapiens -0.057608552210240305 VSEGGPAEIAGLQIGDK Unmodified 1639.8417 0.84171503 3225 O14907 TAX1BP3 Tax1-binding protein 3 yes yes 0 0 0 5 0 1 58.349 58.405 3 0.00037042 17267 20230619_1885_Aki_TMTPro18x_K_F5 74.141 62.527 114660 88054 111000 114450 82625 105390 118400 97286 146800 117440 137250 111310 119060 108800 129060 138000 102580 109790 105960 80851 112680 113290 89184 107040 118160 100590 147380 117530 140320 113340 122580 113780 129670 136620 98456 104550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61837000 29827 3225 28013 56007 45223 45223 1 9606 Homo sapiens 0.04738784018650222 VSEIEEEQEDPYLNDR Unmodified 1963.8647 0.8646949 2766 CON__ENSEMBL:ENSBTAP00000016046 yes yes 0 0 0 1 0 1 51.463 51.463 3 1.8104E-14 14965 20230619_1880_Aki_TMTPro18x_K_F1 175.43 165.77 + 20417 17198 22673 20704 23181 28085 24530 22578 25425 24768 27111 28335 24836 22859 31553 25948 27635 34059 18899 15773 22844 20721 24085 27708 24686 23508 25917 25026 27663 28411 25746 23928 31722 26495 26523 32240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23188000 29828 2766 28014 56008 45224 45224 1 9606 Homo sapiens -0.07868286445159356 VSELKEELK Unmodified 1073.5968 0.5968403 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q9UEL2 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 1 5.5 0.5 1 1 51.34 51.416 3 0.0012537 14481 20230619_1886_Aki_TMTPro18x_K_F6 100.69 52.863 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29829 3776 28015 56009;56010 45225;45226 45226 2 9606 Homo sapiens 0.06298575066307421 VSEQGLIEILK Unmodified 1227.7075 0.70745338 3221 O14737;K7EQA1 PDCD5 Programmed cell death protein 5 yes no 0 0 0 6.5 0.5 1 1 62.654 62.697 3 1.434E-06 19026 20230619_1887_Aki_TMTPro18x_K_F7 158.56 116.56 179680 147620 170780 190860 156610 192990 180430 180150 207990 178890 187900 220630 237180 191470 184680 269480 224020 263220 166080 135500 174150 189190 164640 194630 181430 184980 209490 182190 196070 221180 237990 202590 191370 268920 214230 249930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 406660000 29830 3221 28016 56011;56012 45227;45228 45228 2 9606 Homo sapiens 0.10270795054566406 VSEYVPEIVNFVQK Unmodified 1649.8665 0.86647322 2568 B4DPV7;P49589-3;A8K067;B4DKY1;A0A024RCG3;P49589-2;P49589;A8MVQ3;B4DI19;Q59HE5 CARS Cysteine--tRNA ligase, cytoplasmic yes no 0 0 0 8 0 1 63.819 63.842 3 0.030855 19466 20230619_1888_Aki_TMTPro18x_K_F8 48.625 27.374 21120 31048 29274 39129 28450 31861 37254 21924 33804 44225 44473 58653 51605 40239 51147 49467 60720 67194 19689 28444 29115 38729 29812 32555 36918 23764 35106 43925 45553 58191 52403 42639 52536 50551 58049 63609 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129980000 29831 2568 28017 56013 45229 45229 1 9606 Homo sapiens 0.06753463892027867 VSFADPIYQAGLADDIDRR Unmodified 2121.0491 0.049082043 4071 Q5UIP0-2;Q5UIP0;H7C2B5 RIF1 Telomere-associated protein RIF1 yes no 0 0 1 4.5 0.5 1 1 59.869 59.897 3 7.6254E-20 17853 20230619_1885_Aki_TMTPro18x_K_F5 187.35 158.86 34453 32371 33303 36563 29384 35909 30114 35621 36532 43225 41142 37509 41599 36073 38075 47916 39101 40979 31878 29660 33884 36581 30893 36357 30556 36599 37077 43091 41988 38311 42275 37877 38893 47545 37414 38989 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81101000 29832 4071 28018 56014;56015 45230 45230 1 9606 Homo sapiens 0.03339946496043922 VSFASTDEQDAMDGELVCR Unmodified 2128.9041 0.90413364 2083 A8K607;Q9UIA9;E7ESC6;D3DSQ7;B4DSP8 XPO7 Exportin-7 yes no 0 0 0 2 0 1 57.27 57.287 3 4.5225E-12 17513 20230619_1881_Aki_TMTPro18x_K_F2 142.72 132.52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29833 2083 28019 56016 45231 45231 1 9606 Homo sapiens -0.11516225757623033 VSFCAPDR Unmodified 950.428 0.42800083 383 P49757-2;A0A024R6C4;B2RCI6;A0A024R681;P49757-4;A0A024R684;A0A024R6F4;P49757-3;P49757;G3V3R1;Q86SW6;G3V3M5;Q86SW5;P49757-7;P49757-6;P49757-8;P49757-5;M0QZV7;M0QXQ4;M0QYC2;Q9Y6R0;B7Z5W0;A0A0C4DGH3;A8K033;M0R0Q4 NUMB;NUMBL Protein numb homolog;Numb-like protein yes no 0 0 0 6 0.816 1 1 1 43.121 43.205 2 0.045387 10869 20230619_1886_Aki_TMTPro18x_K_F6 71.692 53.657 88403 59058 83951 88052 101510 115980 101400 97983 115930 88049 90045 87567 86174 77541 94914 94244 105400 101460 81616 54343 85949 86858 104100 114690 102670 101070 116180 89573 93451 88611 88548 81198 96933 94845 100710 96305 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76423000 29834 383 28020 56017;56018;56019 45232 45232 1 9606 Homo sapiens -0.04919605048166886 VSFELFADK Unmodified 1054.5335 0.53351176 2036 P62937;A8K486;V9HWF5;B2RE56;B4DM82;Q71V99;F8WE65;C9J5S7;A0A7I2V5J5 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 7.17 0.687 1 3 2 62.231 62.266 2;3 0.00027571 18741 20230619_1888_Aki_TMTPro18x_K_F8 120.12 41.785 779620 622670 714240 777730 675870 843120 794600 791520 850580 757430 790310 787030 757550 679710 869710 823230 814250 853620 720290 571410 730920 773500 709150 846140 796160 811390 860650 768340 812610 794180 779740 712160 879110 826860 779880 810310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 25377000000 29835 2036 28021 56020;56021;56022;56023;56024;56025 45233;45234;45235 45235 3 9606 Homo sapiens 0.008426343491009902 VSFELFADKVPK Unmodified 1378.7497 0.74965254 2036 P62937;A8K486;V9HWF5;B2RE56;B4DM82;Q71V99;F8WE65;C9J5S7;A0A7I2V5J5 PPIA;HEL-S-69p Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 1 2.33 0.471 2 1 61.347 61.364 3;4 1.4899E-05 19163 20230619_1881_Aki_TMTPro18x_K_F2 134.21 107.18 817720 1108700 1009200 1553100 262050 625800 1076200 1128500 299750 914490 1009600 176670 151740 12516 2420000 39770 43313 37038 760700 1017000 1002000 1519200 270970 713640 1015500 1113400 377950 910510 963870 208960 286040 13634 2276600 46995 64372 35230 2 2 2 2 1 2 2 2 2 2 2 2 2 1 2 2 2 2 2368400000 29836 2036 28022 56026;56027;56028 45236;45237 45236 2 9606 Homo sapiens 0.0754277046291918 VSFTGSVPTGMK Oxidation (M) 1225.6013 0.60127375 2459 B4DE91;P49189;B4DX14;P49189-3;P49189-2;B4DYY1 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 1 0 2 0 1 49.731 49.79 3 0.025283 14337 20230619_1881_Aki_TMTPro18x_K_F2 50.207 8.1663 1058100 735230 649960 807650 974480 1308200 1133000 1025200 2040000 226760 218620 148010 217020 140650 292590 192640 178760 128390 974370 674260 700570 816010 995510 1277600 1158400 1045600 1947800 273750 309370 154560 225690 148260 289340 189510 171790 122810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 344530000 29837 2459 28023 56029 45238 45238 1517 1 9606 Homo sapiens -0.0025028378242950566 VSFTGSVPTGMK Unmodified 1209.6064 0.60635913 2459 B4DE91;P49189;B4DX14;P49189-3;P49189-2;B4DYY1 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 3 0 1 53.858 53.91 3 8.1086E-05 15923 20230619_1882_Aki_TMTPro18x_K_F3 93.345 69.74 80679 65510 83404 90264 84756 95771 91085 89637 97149 115000 120420 129460 143160 110140 113090 144190 133220 160690 74619 60176 84563 89169 88102 96269 91698 92693 99659 115270 123500 130120 143880 116130 116820 145160 127460 152350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158120000 29838 2459 28023 56030 45239 45239 1 9606 Homo sapiens 0.009940200802020627 VSGAQEMVSSAK Unmodified 1192.5758 0.57578728 1189 A0A140VJN8;O60664-4;O60664-3;O60664;K7EL96;K7ERZ3;K7ER39 PLIN3 Perilipin-3 yes no 0 0 0 7 0 1 45.918 46.005 2 0.0033292 11734 20230619_1887_Aki_TMTPro18x_K_F7 107.06 87.784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29839 1189 28024 56031 45240 45240 1 9606 Homo sapiens -0.01279758304826828 VSGGLEVLAEK Unmodified 1100.6077 0.60773933 1493 A0A384P5U2;P39687;H0YN26;Q6PKH8;Q08AJ6;Q3KPI8;O43423 ANP32A;ANP32C Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member C yes no 0 0 0 5.8 0.748 2 2 1 56.576 56.642 2;3 5.4404E-06 16669 20230619_1886_Aki_TMTPro18x_K_F6 179.31 127.58 829610 686580 751450 771470 732500 817140 862730 806260 871620 912550 857180 891490 1033700 804580 847980 1028100 953570 968490 766570 629330 769730 773040 765930 822800 862620 827440 887490 915820 888090 903080 1040100 844950 872370 1025700 911460 920450 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 6638399999.999999 29840 1493 28025 56032;56033;56034;56035;56036 45241;45242;45243;45244 45244 4 9606 Homo sapiens 0.06145977440610295 VSGILVK Unmodified 714.46398 0.46397563 3987 Q53F02;Q9UKF6;G5E9W3;B4DQR2;Q05BZ5 CPSF3 Cleavage and polyadenylation specificity factor subunit 3 yes no 0 0 0 3 0 1 51.501 51.566 3 0.070927 14836 20230619_1882_Aki_TMTPro18x_K_F3 57.559 32.927 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29841 3987 28026 56037 45245 45245 1 9606 Homo sapiens 0.09532220190988028 VSGNQHEELQNVR Unmodified 1508.7332 0.73316763 1121 A0A0S2Z5B4;Q6IAK1;A0A0S2Z5A2;Q53F53;A0A0S2Z5B0;Q8WXF7-2;Q8WXF7;A0A804HLC1 SPG3A;ATL1 Atlastin-1 yes no 0 0 0 3.5 0.5 1 1 32.895 32.96 3 1.7294E-15 6772 20230619_1882_Aki_TMTPro18x_K_F3 188.13 161.19 19118 14875 18720 18983 23520 28784 22463 20466 24507 18682 27447 30677 22359 16835 26499 23311 30134 25876 17670 13655 19128 18953 24045 28160 22771 21443 24934 19348 27830 30124 23166 18166 27054 23475 28767 24566 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47395000 29842 1121 28027 56038;56039 45246 45246 1 9606 Homo sapiens -0.0008496244111029227 VSGSPSSGFR Unmodified 979.47231 0.47230849 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7 NEFM Neurofilament medium polypeptide yes no 0 0 0 4 3 1 1 36.928 36.961 2 8.4835E-08 8736 20230619_1880_Aki_TMTPro18x_K_F1 193.1 154.31 148380 109290 131500 129460 112200 110120 70962 78636 97678 132450 204550 219690 141510 161070 196390 148960 240520 207640 136990 100270 134580 128840 116980 112200 75028 84076 102250 133570 202240 216960 149320 167260 200890 153340 229480 196720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 157340000 29843 1958 28028 56040;56041 45247;45248 45247 2 9606 Homo sapiens -0.018248776303266823 VSGTLDTPEK Unmodified 1045.5292 0.52915466 4471 Q9BYG3;C9J808;H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein yes no 0 0 0 4 0 1 44.462 44.506 2 1.0839E-06 11492 20230619_1883_Aki_TMTPro18x_K_F4 206.43 147.62 57109 33174 57827 58104 71572 79800 71209 76435 77849 61300 71017 90525 80028 75304 72241 54629 99033 98966 52717 30611 58898 56880 73247 78915 72032 77892 78620 63669 73720 89950 81101 77106 74966 57774 94495 93528 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38431000 29844 4471 28029 56042 45249 45249 1 9606 Homo sapiens 0.008211251355305649 VSGVDGYETEGIR Unmodified 1380.6521 0.65212334 3892 Q4ZG57;Q14566 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 2 0.816 1 1 1 45.916 45.995 2 1.8478000000000002E-45 12297 20230619_1882_Aki_TMTPro18x_K_F3 304.18 283.31 416720 321600 364320 393190 332390 410460 395860 392170 424940 566400 557430 537660 625930 503850 472860 616680 545360 541740 384790 295100 374190 391440 349960 413290 396560 406550 437200 561990 568380 546030 629130 526880 488330 613320 521080 515360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1395500000 29845 3892 28030 56043;56044;56045 45250;45251;45252 45252 3 9606 Homo sapiens -0.022976632038535172 VSHEQFR Unmodified 901.44061 0.44061443 94 A8K724;A0A024R0J1;O96013;A0A024R0L8;O96013-2;O96013-3;O96013-4;B4E3B5;B4DE88;B3KTJ2;B0AZM9;Q9P286 PAK4;PAK7 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 4;Serine/threonine-protein kinase PAK 7 yes no 0 0 0 5 0 1 29.005 29.079 3 0.0013853 5365 20230619_1885_Aki_TMTPro18x_K_F5 145.04 78.363 26729 13317 22478 29501 30080 28882 31839 34365 35119 30966 38066 34414 39379 33156 34338 29317 40643 33597 24623 12345 23343 28422 30665 29357 32102 34633 35690 31583 38947 34747 39907 34047 35321 29787 38777 31892 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13245000 29846 94 28031 56046 45253 45253 1 9606 Homo sapiens -0.014048255936131682 VSHIDVITAEMAK Unmodified 1412.7334 0.73335055 4191 Q9UQE7;Q86VX4;B0AZQ4 SMC3 Structural maintenance of chromosomes protein 3;Structural maintenance of chromosomes protein yes no 0 0 0 6.5 0.5 1 1 52.244 52.32 3 6.4506E-16 14890 20230619_1886_Aki_TMTPro18x_K_F6 176.05 109.43 208270 146360 212790 223860 212340 233640 229730 239090 295820 250710 236880 232150 253860 207190 235280 271730 233230 242100 192450 134680 215840 219760 221140 235550 232690 244150 295220 252280 246520 235740 257620 217980 239670 270280 223230 230230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 568320000 29847 4191 28032 56047;56048 45254;45255 45254 2 9606 Homo sapiens 0.043493212345310894 VSHLLGINVTDFTR Unmodified 1570.8467 0.84674083 148 P35579;A0A8I5KWT8;A0A024R1N1;P35579-2;Q86XU5;B4E3S1 MYH9 Myosin-9 yes no 0 0 0 3.5 0.5 1 1 59.249 59.265 3 1.0489E-11 18029 20230619_1883_Aki_TMTPro18x_K_F4 176.23 146.18 87482 61382 90578 94247 78851 97146 99575 85441 106500 112420 113580 103010 123010 103430 110220 121790 123890 128210 80844 56489 91619 92471 83448 97690 99409 88871 108420 111910 116540 105060 124640 107690 113120 122420 118430 121690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 671960000 29848 148 28033 56049;56050 45256;45257 45257 2 9606 Homo sapiens 0.08415132671916581 VSHQGYSTEAEFEEPR Unmodified 1864.8228 0.8227705 2239 B2R6S9;P30533 LRPAP1 Alpha-2-macroglobulin receptor-associated protein yes no 0 0 0 2 0 1 39.705 39.775 3 6.1454E-27 9708 20230619_1881_Aki_TMTPro18x_K_F2 241.87 229.15 34002 17110 34245 36838 34085 37985 34791 36132 41799 42412 49757 48947 51836 34934 36711 51866 46250 55177 31367 15852 34777 35559 35448 38246 35276 37213 42504 42714 50737 48938 52057 37436 38211 51980 44221 52340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85816000 29849 2239 28034 56051 45258 45258 1 9606 Homo sapiens -0.07504797343062819 VSHSPALSSDVR Unmodified 1253.6364 0.6364137 2988 F8W108;F8WCU9;Q68CP9-3;Q68CP9;F8VWP4;Q8NBP1 ARID2 AT-rich interactive domain-containing protein 2 yes no 0 0 0 5.5 0.5 1 1 33.435 33.498 3 0.0021889 7000 20230619_1885_Aki_TMTPro18x_K_F5 75.479 56.208 38373 28293 37686 42027 46881 32386 46517 47632 38063 37633 51796 49428 47070 43239 45410 32754 59361 49957 35455 26022 38483 41190 47773 33868 46682 47355 39786 38898 52283 49430 48137 44258 46896 34094 56597 47301 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 20888000 29850 2988 28035 56052;56053 45259;45260 45259 2 9606 Homo sapiens 0.019740950697269 VSHVSTGGGASLELLEGK Unmodified 1739.9054 0.90537792 3374;1199 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DHB3;B4DWQ3;P07205;A0A140VJR3 HEL-S-68p;PGK1;PGK2 Phosphoglycerate kinase;Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 no no 0 0 0 4 3 1 1 51.716 51.716 3 8.3037E-23 14338 20230619_1887_Aki_TMTPro18x_K_F7 193.3 177.55 32962 26031 33727 34538 30587 30752 27343 29361 33031 37362 37885 36753 40133 31114 42493 33165 34907 37053 30479 23904 34141 34130 31917 31362 27967 30313 33555 37303 38743 37132 40964 32413 42698 33546 33487 35144 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54477000 29851 3374;1199 28036 56054;56055 45261;45262 45262 2 9606 Homo sapiens 0.06502144455794223 VSHYIINSLPNRR Unmodified 1567.8583 0.85830857 3590 P46109 CRKL Crk-like protein yes yes 0 0 1 8 0 1 42.56 42.563 4 1.0299E-15 10504 20230619_1888_Aki_TMTPro18x_K_F8 208.95 183.48 51279 32908 46762 43326 41614 39825 38900 41769 49862 30212 28181 21753 25171 20479 39063 25897 31690 20007 47318 30244 47758 42868 43544 40594 39741 42231 49261 30929 29788 22454 26445 21457 38992 25654 30312 19108 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72181000 29852 3590 28037 56056 45263 45263 1 9606 Homo sapiens 0.09709374485919398 VSIAELAQASNSLIAWGR Unmodified 1885.0058 0.005760665 4363 Q96HY6 DDRGK1 DDRGK domain-containing protein 1 yes yes 0 0 0 5 0 1 65.248 65.291 3 1.1779E-06 20302 20230619_1885_Aki_TMTPro18x_K_F5 109.04 88.653 3484.1 2997.1 5203.5 4318.6 3242.9 4904.1 3231.3 5957.4 6359 4436 5179.8 4886.4 6528.2 3997.6 7165.6 4201.9 5035.1 4330.8 3235.8 2753.9 5108.2 4262.8 3536.2 4932.8 3366 5963.5 6247.9 4579.4 5428.4 4911.5 6636.9 4171 7140.5 4236.8 4833.3 4114.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13342000 29853 4363 28038 56057 45264 45264 1 9606 Homo sapiens 0.09865801509408811 VSIAPSQR Unmodified 856.47667 0.47666558 2241 B4DLS8;Q53GV6;B2R791;O43395;B4DM28;O43395-3 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes no 0 0 0 5.33 3.09 1 1 1 36.729 36.756 2 0.0014074 8167 20230619_1888_Aki_TMTPro18x_K_F8 143.12 91.333 110190 74705 109740 110410 155980 175670 136170 134560 186210 66888 87273 67870 73270 63143 105570 67249 91345 60906 101770 68729 112220 109350 157950 171650 139890 138460 182520 71537 93513 68836 76805 65493 105770 67298 87325 58027 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 59878000 29854 2241 28039 56058;56059;56060 45265;45266 45266 2 9606 Homo sapiens 0.04268631583227034 VSILAAIDEASK Unmodified 1215.6711 0.67106787 2781 CON__P15497 yes yes 0 0 0 6.5 0.5 1 1 62.955 62.996 3 2.5563E-07 19162 20230619_1887_Aki_TMTPro18x_K_F7 160.52 107.83 + 33561 76888 106480 36516 144470 192410 119500 123680 185280 142750 248900 355720 141190 180600 222000 147480 190620 402780 31940 69937 102320 42437 146570 181150 124020 131500 187160 149730 248450 344950 151690 190270 222270 163190 184150 379070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 644180000 29855 2781 28040 56061;56062 45267 45267 1 0.07185918157824744 VSISEGDDKIEYR Unmodified 1509.7311 0.73110195 3487 Q96BS4;P22087;M0QXL5;M0R2Q4;B4DLD4;M0R299;M0R0P1;M0R2U2;M0R1H0;M0R2B0 FBL rRNA 2'-O-methyltransferase fibrillarin yes no 0 0 1 3 0.816 1 1 1 46.512 46.579 3 4.2727E-11 12410 20230619_1883_Aki_TMTPro18x_K_F4 185.66 164.85 515020 389190 479490 576630 549520 710600 614180 604700 683530 675670 739770 776180 754640 629280 734410 674800 710620 760500 475730 357900 491870 568230 567910 705440 617620 627010 694660 682150 757350 778120 768530 656500 745520 682450 680490 721240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 412880000 29856 3487 28041 56063;56064;56065 45268;45269 45269 2 9606 Homo sapiens -0.0033743596954991517 VSIVTPEDILR Unmodified 1240.7027 0.70270235 1976 A6NJA2;B2RD79;P54578-2;P54578-3;P54578;D3DUG9 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 6.5 0.5 1 1 61.348 61.395 2 0.0087488 18412 20230619_1887_Aki_TMTPro18x_K_F7 88.681 58.426 80609 53593 71482 82068 55530 74665 73881 85551 76920 112000 87558 114210 95197 98735 72136 113790 117910 145230 74380 49332 73210 80415 59555 76248 73591 87327 78808 111740 89829 115180 95994 103130 76524 115720 112560 137500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 815620000 29857 1976 28042 56066;56067 45270 45270 1 9606 Homo sapiens 0.09197910911780127 VSIYDSK Unmodified 810.41233 0.41233399 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;Q59EC0 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 6.5 0.5 1 1 46.061 46.148 2 0.005588 12177 20230619_1886_Aki_TMTPro18x_K_F6 139.68 62.305 370700 244760 335340 359310 422540 464790 441950 432990 531960 430510 546970 527670 494060 452170 456880 384980 598520 526140 342090 225200 345090 354690 432690 461100 447170 444450 536900 438400 557980 528590 504480 465390 472600 396160 570790 498500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 358770000 29858 1718;4020 28043 56068;56069 45271 45271 1 9606 Homo sapiens -0.0004556829356943126 VSLDVNHFAPDELTVK Unmodified 1782.9152 0.91521432 3383 V9HW43;P04792;A0A6Q8PFK8;A0A6Q8PGK1;A0A6Q8PHJ6;B4DL87;A0A6Q8PFE7;A0A6Q8PF43;A0A6Q8PHA6;A0A6Q8PH65;A0A6Q8PGY2 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 0 0 0 6 0.816 1 1 1 58.768 58.825 3 5.8529E-11 17304 20230619_1887_Aki_TMTPro18x_K_F7 147.53 128.14 468130 388990 446580 525140 459640 559190 473060 459110 495250 752320 645440 678130 802510 625910 682200 812100 702980 804640 432740 357200 456140 519310 477190 560450 477130 483830 510780 742010 662260 689790 807840 657590 697720 812260 673110 763960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 470570000 29859 3383 28044 56070;56071;56072 45272;45273;45274 45274 3 9606 Homo sapiens 0.05507332461115766 VSLEEIYSGCTK Unmodified 1384.6544 0.65443153 3503;4019 Q6FI51;Q6FHS4;P25685;A0A7I2V3K7;P25685-2;M0QXK0;M0R080;M0R1D6;M0QZD0;M0QYT3;B4DNN2;Q9UDY4;Q59E89 DNAJB1;DNAJB4 DnaJ homolog subfamily B member 1;DnaJ homolog subfamily B member 4 no no 0 0 0 7 0 1 57.009 57.064 3 1.1797E-09 16632 20230619_1887_Aki_TMTPro18x_K_F7 142.1 117.71 80010 64212 72862 80287 73693 90490 82002 82786 92514 96331 96064 91657 106700 87754 93779 113010 109620 121790 73920 58926 74678 79885 76800 90530 82543 85462 93840 96495 98829 93178 107940 92029 96572 113580 104810 115540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53301000 29860 3503;4019 28045 56073 45275 45275 1 9606 Homo sapiens -0.022509507904260317 VSLEETAQLPSAPQGSR Unmodified 1768.8955 0.89554151 4418 Q9BRP8-2;Q9BRP8 WIBG Partner of Y14 and mago yes no 0 0 0 5.5 0.5 1 1 50.443 50.519 3 3.924E-09 13950 20230619_1885_Aki_TMTPro18x_K_F5 124.96 112.13 28673 18873 26351 23962 24581 32593 26571 27817 32384 31067 27613 29599 36926 31023 30089 35709 32651 38662 26463 17337 26925 23898 25785 32176 26865 28821 32492 31192 28974 30163 37067 32213 30890 35956 31257 36668 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 127990000 29861 4418 28046 56074;56075 45276 45276 1 9606 Homo sapiens 0.04184956450376376 VSLLNEQFLPLIR Unmodified 1540.8977 0.89771377 2332 B2RWN5;Q5T3Q7;Q9H583;A0A024R3R7 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed yes no 0 0 0 4 0 1 64.567 64.577 3 5.9078E-06 20243 20230619_1883_Aki_TMTPro18x_K_F4 122.46 109.03 6508.6 5649.7 6144.5 6563.8 8344.2 7217.3 6006.9 8103.7 7786.3 8341.2 10711 10062 11208 9452.2 7580.6 8575.6 11010 12442 6017.8 5179.3 6303.4 6564.8 8419.1 7275.3 6256.5 8217.2 7951.4 8466.8 10863 10117 11251 9730.3 7967 8845.2 10511 11771 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36130000 29862 2332 28047 56076 45277 45277 1 9606 Homo sapiens 0.14890081716794157 VSLQVHPDR Unmodified 1049.5618 0.56179219 50 Q8WXX5;A0A024QZN2 DNAJC9;hCG_2024613 DnaJ homolog subfamily C member 9 yes no 0 0 0 6 0.816 1 1 1 36.792 36.867 3 3.0651E-06 8278 20230619_1886_Aki_TMTPro18x_K_F6 171.85 123.43 82322 58530 80820 81002 93204 99873 89543 96546 104610 85095 88323 93586 88583 73215 77634 79133 100560 93587 76047 53795 82406 80196 95730 99464 90982 98523 105030 86888 91425 93896 89896 76538 80403 80237 95949 88762 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203050000 29863 50 28048 56077;56078;56079 45278 45278 1 9606 Homo sapiens 0.038993770490378665 VSLSSLCSCEETRPLK Unmodified 1864.9023 0.90228315 4655 Q9UBL6;Q9UBL6-2 CPNE7 Copine-7 yes no 0 0 1 8 0 1 50.933 51.01 3 2.1892E-06 13943 20230619_1888_Aki_TMTPro18x_K_F8 118.47 102.33 45796 42853 46382 45811 35914 42741 48185 43478 37031 52107 50607 41357 58691 45650 50059 58529 52990 52214 42389 39245 46912 46011 38446 43486 47554 44615 38966 51845 51584 42669 59196 47653 51263 58232 50667 49663 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40084000 29864 4655 28049 56080 45279 45279 1 9606 Homo sapiens 0.004428100150562386 VSMEEQR Unmodified 877.39637 0.39636635 3655 P55036;Q5VWC4;P55036-2;H0Y3Y9 PSMD4 26S proteasome non-ATPase regulatory subunit 4 yes no 0 0 0 2 0 1 33.709 33.766 2 0.017891 7189 20230619_1881_Aki_TMTPro18x_K_F2 108 64.997 28413 14121 32594 31131 38819 48971 32747 40696 38330 24803 36239 47095 38264 41076 39939 18822 45804 43620 26241 13089 32851 30241 39712 47916 33573 41698 38601 26622 37454 46531 39130 41375 40783 20740 43753 41176 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19695000 29865 3655 28050 56081 45280 45280 1 9606 Homo sapiens -0.04723597802126278 VSMSSQNDGFFAVHLK Oxidation (M) 1781.8407 0.84066917 2174 E9PDF6;B0I1S9;O43795-2;O43795;B3KQI2;H7C2Y7 MYO1B Unconventional myosin-Ib yes no 0 1 0 1 0 1 53.97 53.97 3 2.0059E-08 16002 20230619_1880_Aki_TMTPro18x_K_F1 134.14 115.41 24686 22750 26726 35912 29156 30873 27964 32254 31233 35546 36446 36053 34299 25615 29803 35133 35527 35330 22860 20923 27067 35090 30046 31622 28389 32946 31866 35739 37046 36220 34837 27288 30731 35147 33935 33555 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21464000 29866 2174 28051 56082 45281 45281 1346 1 9606 Homo sapiens -0.01897753621915399 VSMVGQVK Oxidation (M) 862.45824 0.45823833 1224 A0A140VK39;Q9Y570;Q9Y570-4;Q9Y570-2 PPME1 Protein phosphatase methylesterase 1 yes no 0 1 0 4.5 3.5 1 1 40.868 40.864 2;3 0.020831 9832 20230619_1888_Aki_TMTPro18x_K_F8 82.452 49.843 113620 95069 97530 109460 115200 115960 112500 120950 153710 122380 136990 127510 130340 120140 128750 137830 154250 121660 104960 87158 100730 109470 118220 116930 114870 123230 153490 123830 140980 129040 133270 125040 132400 137320 147110 115850 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 95357000 29867 1224 28052 56083;56084 45282;45283 45283 763 2 9606 Homo sapiens 0.021507536170247477 VSMVGQVK Unmodified 846.46332 0.4633237 1224 A0A140VK39;Q9Y570;Q9Y570-4;Q9Y570-2 PPME1 Protein phosphatase methylesterase 1 yes no 0 0 0 2 0 1 46.482 46.561 2 0.0024859 12863 20230619_1881_Aki_TMTPro18x_K_F2 125.96 65.811 298880 225390 260030 304140 287400 331150 296570 291430 411870 338740 389570 384880 372800 312280 356730 348750 459080 397990 275930 207050 268060 300900 297030 331830 302020 301820 411870 341410 399950 386130 380340 326520 368590 352680 437830 377710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71318000 29868 1224 28052 56085 45284 45284 1 9606 Homo sapiens 0.033950574796335786 VSNFKPGVYAVSVTGR Unmodified 1679.8995 0.89950468 3743 P63272;D3DTZ5;J3QSB9 SUPT4H1 Transcription elongation factor SPT4 yes no 0 0 1 6.5 0.5 1 1 51.863 51.939 3 3.052E-06 14771 20230619_1886_Aki_TMTPro18x_K_F6 117.3 100.95 58648 63526 66261 70544 63061 64643 72110 70626 80105 79271 75751 66470 65943 57697 70306 90491 69030 79031 54398 58171 66651 70620 65936 65994 72441 71980 80989 79251 77447 67829 67835 61529 71467 89697 66129 75149 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 274920000 29869 3743 28053 56086;56087 45285 45285 1 9606 Homo sapiens 0.08675090734732294 VSNIFDDPLNAFGGQ Unmodified 1592.7471 0.74708636 2080 Q9Y4E1;J3KP36;Q9Y4E1-4;Q9Y4E1-1;Q9Y4E1-2;Q9Y4E1-6;Q9Y4E1-3;Q9Y4E1-5;A8K5W5;Q641Q2;Q641Q2-2;B7ZME8;A0A087WYF6;E7ESD2;F8W7U3;B4DF48;Q9Y4N4;B3KMC4;B4E255;Q6P0Q7 FAM21C;FAM21A;DKFZp434O171 WASH complex subunit FAM21C;WASH complex subunit FAM21A yes no 0 0 0 5.5 0.5 1 1 66.666 66.709 2 1.0869E-13 21025 20230619_1886_Aki_TMTPro18x_K_F6 183.99 169.57 15882 13688 16672 18680 16940 14927 17993 19084 18086 17266 20052 21277 21846 19454 18580 25432 22004 21491 14696 12569 16881 18406 17566 15482 18094 19166 18497 17664 20567 21372 22093 20429 19178 25221 21017 20456 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41368000 29870 2080 28054 56088;56089 45286;45287 45287 2 9606 Homo sapiens -0.025577297326890402 VSNSGITR Unmodified 832.44028 0.44028008 3622 P50991;A8K3C3;P50991-2;B7Z9L0;B7Z2Z8;B7Z2F4 CCT4 T-complex protein 1 subunit delta yes no 0 0 0 6.5 1.12 1 1 1 1 32.098 32.151 2 0.03418 6395 20230619_1888_Aki_TMTPro18x_K_F8 76.345 46.969 29370 14528 35513 35745 46002 52123 40606 50402 39244 25712 44852 45776 29824 33845 48685 14852 47423 40545 27138 13495 35726 34530 46790 51364 41250 50916 40200 27919 45140 45132 31864 34287 48911 16785 45339 38263 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 114410000 29871 3622 28055 56090;56091;56092;56093 45288 45288 1 9606 Homo sapiens 0.01735754686535529 VSNTLESR Unmodified 904.46141 0.46140945 3556 Q53Y06;P36543;P36543-3;P36543-2;C9J8H1;A0A140VKA8;Q96A05 ATP6V1E1;ATP6V1E2 V-type proton ATPase subunit E 1;V-type proton ATPase subunit E 2 yes no 0 0 0 3.5 0.5 1 1 35.296 35.348 2 0.004343 7657 20230619_1883_Aki_TMTPro18x_K_F4 130.28 67.62 95198 51849 128440 132010 148060 160950 131220 152850 136590 104320 163720 178580 132610 134390 175210 74158 184370 167050 88097 48168 128010 126940 151670 160190 133580 155390 139730 110290 165540 176270 138490 136890 177340 81039 176200 157750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 330360000 29872 3556 28056 56094;56095 45289 45289 1 9606 Homo sapiens 0.0053571999538917225 VSPAAPER Unmodified 825.43447 0.43446642 245 B2R642;A8K6A6;A0A024R3I5;P43121;B3KXZ9;P43121-2 MCAM Cell surface glycoprotein MUC18 yes no 0 0 0 3.5 0.5 1 1 32.164 32.234 2 0.011898 6458 20230619_1882_Aki_TMTPro18x_K_F3 96.253 41.704 55244 29825 77160 79908 82820 96914 78667 104390 90501 53101 89651 104610 78287 80162 88720 39470 97906 79040 51142 27738 76667 76718 85460 96738 80017 104700 91305 57996 91652 102940 80850 81295 90250 42722 93457 74722 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55888000 29873 245 28057 56096;56097 45290;45291 45290 2 9606 Homo sapiens 0.014766561748501772 VSPCLPVLSR Unmodified 1126.6169 0.61686423 2495 B4DII5;B4DWX3;O60684;Q5TFJ7 KPNA6 Importin subunit alpha;Importin subunit alpha-7 yes no 0 0 0 3.5 0.5 1 1 52.989 53.029 2 0.00032946 15486 20230619_1882_Aki_TMTPro18x_K_F3 131.22 66.678 266350 228690 251270 259370 245230 292550 278560 276940 308940 292770 269530 254670 302210 235660 269800 318990 306210 297050 246240 209610 256490 259930 256320 292960 279900 284390 311520 293920 279730 259750 305770 248240 277200 317840 292560 282410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 244040000 29874 2495 28058 56098;56099 45292;45293 45292 2 9606 Homo sapiens 0.05862047525283742 VSPEEAIK Unmodified 871.4651 0.46509784 3389 Q53XC0;P05198;H0YJS4;G3V4T5 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 3.5 0.5 2 2 45.193 45.253 2;3 0.0039929 11939 20230619_1882_Aki_TMTPro18x_K_F3 134.3 54.116 560010 406490 468770 557480 547960 623140 586760 578240 701490 572430 583110 565460 646150 520250 595070 612190 692280 568720 516760 373540 485560 551200 564460 623920 592750 593730 703180 578940 606510 573000 655000 543100 611390 611320 660570 541090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 760160000 29875 3389 28059 56100;56101;56102;56103 45294;45295 45294 2 9606 Homo sapiens 0.024223897692309038 VSPEEVTIYNHPGIQAELR Unmodified 2151.096 0.096032235 4273 Q8TEM1;A0A8Q3WKI1;Q8TEM1-2 NUP210 Nuclear pore membrane glycoprotein 210 yes no 0 0 0 5 0 1 52.154 52.228 3 3.3652E-08 14708 20230619_1885_Aki_TMTPro18x_K_F5 97.384 89.196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29876 4273 28060 56104 45296 45296 1 9606 Homo sapiens 0.06652806047259219 VSPESNEDISTTVVYR Unmodified 1794.8636 0.86357268 3339 O94925-3;B3KM58;Q68D38;B8ZZC5;B8ZZA8 GLS;DKFZp686O15119 Glutaminase kidney isoform, mitochondrial yes no 0 0 0 2.5 0.5 1 1 48.733 48.805 3 5.497499999999999E-26 13605 20230619_1882_Aki_TMTPro18x_K_F3 188.59 174.5 43943 39122 41355 41193 48994 44251 55908 37020 40997 73163 84527 95288 97190 103110 73718 72666 109710 120910 40635 35830 42336 41489 50348 44408 55496 39353 44465 72657 85292 95894 97823 104470 77349 76228 104700 114290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 177270000 29877 3339 28061 56105;56106 45297 45297 1 9606 Homo sapiens -0.0020645602346576197 VSPETVDSVIMGNVLQSSSDAIYLAR Unmodified 2750.3797 0.37966024 2292 B2RB23;P42765;A0A0B4J2A4;B3KNP8 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial yes no 0 0 0 8 0 1 65.861 65.88 3 4.2229E-61 20306 20230619_1888_Aki_TMTPro18x_K_F8 255.41 228.28 2463.2 3583.6 3410.3 4951.8 4330.5 3203 4866.3 5261.9 4355.4 3907.9 3305.9 4554.6 4391.9 4598.7 4989.6 5489.2 4725.5 5330.8 2296 3286.4 3407.9 4864.2 4421.5 3422 4859.2 5198.6 4426.3 4039.5 3501.1 4595.7 4483.1 4784.6 5051.7 5491.8 4528.1 5062.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16874000 29878 2292 28062 56107 45298 45298 1 9606 Homo sapiens 0.07448559519070841 VSPNPELLSLLQNSEGK Unmodified 1823.9629 0.9628928 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;H0Y9Y3;Q9UMS6;Q9UMS6-3;B4DLE4;Q9UMS6-5 SYNPO2 Synaptopodin-2 yes no 0 0 0 7.5 0.5 1 1 63.033 63.062 3 2.579E-13 19135 20230619_1888_Aki_TMTPro18x_K_F8 146.3 133.1 20645 24464 27690 28247 19560 25478 36086 30050 36697 32828 30427 30102 34698 27248 30318 41514 39253 38310 19197 22404 27441 28194 21402 26075 35425 30477 37085 32949 31701 30609 35070 28966 31461 41270 37464 36424 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 560590000 29879 4686 28063 56108;56109 45299 45299 1 9606 Homo sapiens 0.08386986661344054 VSPSTSYTPSR Unmodified 1180.5724 0.57241646 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 0 7.5 0.5 1 1 37.43 37.455 2 1.6563E-06 8249 20230619_1887_Aki_TMTPro18x_K_F7 187.5 166.04 75563 53694 63810 63364 70248 87030 69388 73796 91117 68139 76471 63089 78676 58175 69098 74537 84589 63059 69723 49269 65898 63514 72581 85880 70693 76119 90938 69074 79141 64188 79734 61065 71306 73989 80635 60094 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 90511000 29880 1140 28064 56110;56111 45300;45301 45300 2 9606 Homo sapiens -0.01064685087203543 VSQAAADLLAYCEAHVR Unmodified 1872.9152 0.9152311 2199 B1APZ0;P50150 GNG4 Guanine nucleotide-binding protein subunit gamma;Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4 yes no 0 0 0 7.5 0.5 1 1 59.825 59.871 3 2.4336999999999996E-40 17724 20230619_1888_Aki_TMTPro18x_K_F8 234.91 210.62 33743 24767 33898 32513 26387 26055 28093 25859 32300 33929 38583 38195 38952 35578 35759 41856 37249 44439 31183 22747 34289 32120 28029 26846 28382 26674 32922 33989 39303 38505 39604 37109 36538 42087 35675 42155 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44354000 29881 2199 28065 56112;56113 45302;45303 45303 2 9606 Homo sapiens 0.013690091894659417 VSQGQLVVMQPEK Oxidation (M) 1457.7548 0.75481428 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 1 0 7 0.816 1 1 1 46.947 47.02 3 7.6659E-05 12174 20230619_1887_Aki_TMTPro18x_K_F7 101.43 79.438 312230 230360 265430 292590 344090 336020 314240 346100 379340 236200 268740 224510 199200 169300 297700 247470 275390 189830 288170 211490 274800 290940 350250 336780 320580 349830 377870 244410 277770 226900 210250 180500 299450 244390 263110 181220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 278520000 29882 909 28066 56114;56115;56116 45304 45304 520 1 9606 Homo sapiens 0.04424706263239386 VSQGQLVVMQPEK Unmodified 1441.7599 0.75989966 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 7.5 0.5 1 1 51.655 51.731 3 5.0658E-05 14246 20230619_1888_Aki_TMTPro18x_K_F8 111.88 94.666 503070 391290 389420 480910 419140 556110 496040 492650 606040 459750 440430 412740 416090 359960 469290 521300 523920 496910 464160 359050 406180 479140 436260 554910 498890 506810 604140 465310 458580 419680 428200 381590 479570 519700 500560 472320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 787910000 29883 909 28066 56117;56118 45305;45306 45306 2 9606 Homo sapiens 0.05669010125848217 VSQGSKDPAEGDGAQPEETPR Unmodified 2153.9825 0.98251862 2497 V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 HEL-S-164nA;GANAB Neutral alpha-glucosidase AB yes no 0 0 1 2 0.816 1 1 1 37.026 37.064 3 1.1696E-36 8807 20230619_1880_Aki_TMTPro18x_K_F1 219.35 206.3 171480 121910 154030 156750 184470 200360 197590 182130 229450 207380 247950 268700 232990 209520 226740 221300 248100 219640 158300 111960 158410 156010 189600 198870 199400 188040 232560 210130 253020 267880 238050 218570 231810 222180 236980 208740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 400820000 29884 2497 28067 56119;56120;56121 45307;45308 45307 2 9606 Homo sapiens -0.048313338565094455 VSQGVEDGPDTK Unmodified 1230.5728 0.57281039 107 A0A024R0R4;Q9UBE0;B3KNJ4;Q9UBE0-2;Q9UBE0-3;A0A590UK93;A0A590UKC5;M0QX65;B4DY66;M0QYM8;M0R054 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes no 0 0 0 2.5 0.5 1 1 40.23 40.295 2;3 0.0021453 9717 20230619_1882_Aki_TMTPro18x_K_F3 84.734 59.942 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29885 107 28068 56122;56123 45309;45310 45310 2 9606 Homo sapiens -0.033253101579930444 VSQLLAVTGK Unmodified 1014.6073 0.6073454 417 A0A024R6X2;Q13951;J3KS23 CBFB Core-binding factor subunit beta yes no 0 0 0 3.5 0.5 1 1 59.232 59.247 2 4.2129E-05 17982 20230619_1883_Aki_TMTPro18x_K_F4 175.34 135.79 81191 74980 71201 72129 91577 115960 104330 104600 143270 89946 86131 66564 99218 68910 84622 103550 97114 74300 75059 68611 73512 73700 94057 113660 105570 107180 141320 91112 91484 68857 100090 72887 87091 101810 92639 70964 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 314190000 29886 417 28069 56124;56125 45311 45311 1 9606 Homo sapiens 0.10062602511413843 VSQMAQYFEPLTLAAVGAASK Unmodified 2181.114 0.11399049 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 4 0.816 1 1 1 65.65 65.679 3 1.4996E-11 20662 20230619_1883_Aki_TMTPro18x_K_F4 129.02 119.1 10442 9512.3 10274 10350 9492.2 11102 7804.6 9626.3 12232 10218 14579 13117 15296 13330 15033 12121 13253 15151 9660.7 8713.6 10436 10398 9891.7 11138 8117.4 9950.8 12293 10392 14869 13200 15572 13681 15177 12381 12711 14351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51202000 29887 1292 28070 56126;56127;56128 45312 45312 1 9606 Homo sapiens 0.07067804977714331 VSQPIEGHAASFAQFK Unmodified 1715.8631 0.86311917 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 0 1 50.52 50.52 3 2.5719E-19 14567 20230619_1880_Aki_TMTPro18x_K_F1 202.84 166.39 450140 357050 423540 521280 394500 493730 470020 494130 487220 558640 545020 621850 555670 484330 498050 596330 615240 746200 415950 328220 432690 512300 414560 501060 470290 506600 498070 562760 557460 623430 564220 510240 514520 605470 588430 706680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 490760000 29888 826 28071 56129 45313;45314 45313 2 9606 Homo sapiens 0.03382213837994641 VSQTTWDSGFCAVNPK Unmodified 1795.8199 0.81993373 373 A0A024R611;P31146;Q59G88;H3BRY3;H3BTU6;H3BRJ0;H3BNA2;H3BU76;B4DJS1;H3BSL1 CORO1A Coronin;Coronin-1A yes no 0 0 0 1 0 1 56.75 56.75 3 5.1958E-11 17167 20230619_1880_Aki_TMTPro18x_K_F1 119.45 101.35 35168 27030 31375 32060 25091 36385 31501 31578 34122 38864 38996 37900 40134 35899 36467 38816 38986 46591 32478 24796 32105 32024 26811 36336 31490 32787 34829 38855 39823 38447 40760 37261 37302 39387 37329 44142 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34239000 29889 373 28072 56130 45315 45315 1 9606 Homo sapiens -0.046143440015612214 VSQVIMEK Unmodified 932.5001 0.50010314 3306 O75475 PSIP1 PC4 and SFRS1-interacting protein yes yes 0 0 0 7 0 2 50.235 50.316 2;3 0.0064473 13729 20230619_1887_Aki_TMTPro18x_K_F7 119.75 68.869 179730 130930 159620 155580 147720 163800 164570 156870 189900 201590 220610 232980 235000 216140 187980 272300 283220 265750 165920 120140 163600 155260 154910 164890 165800 161980 193310 202300 225570 234600 237360 226370 197690 272110 269950 252550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 281810000 29890 3306 28073 56131;56132 45316;45317 45316 2 9606 Homo sapiens 0.031153093055422687 VSQWWER Unmodified 989.47191 0.47191456 3075 H3BS72;Q9P035;H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 0 0 0 8 0 1 51.737 51.814 2 0.020026 14282 20230619_1888_Aki_TMTPro18x_K_F8 105.14 83.608 304070 275800 297700 279000 285760 318390 319360 351910 386780 373880 317500 328210 422400 364490 384100 436030 434270 421980 281310 252490 302660 282310 298790 319870 322240 357560 387720 375350 333740 336600 426090 378610 394290 436090 414940 400990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235730000 29891 3075 28074 56133 45318 45318 1 9606 Homo sapiens -0.02324252559526485 VSRPENEQLR Unmodified 1226.6367 0.63674805 4248 Q8ND56-3;Q8ND56-2;Q8ND56;A0A140TA76;K7EMZ9 LSM14A Protein LSM14 homolog A yes no 0 0 1 3.5 0.5 1 1 30.61 30.685 3 0.00078061 5874 20230619_1882_Aki_TMTPro18x_K_F3 91.701 56.814 91402 53605 91168 109930 127190 131890 122010 113820 141790 83967 115160 95295 96242 78098 96048 71328 119470 77254 84365 49581 93288 106530 129070 131200 123860 116770 142030 86924 118440 95710 98823 80786 98805 72223 113790 73468 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 236820000 29892 4248 28075 56134;56135 45319 45319 1 9606 Homo sapiens 0.03249514789604291 VSSAEGAAKEEPK Unmodified 1301.6463 0.64630969 1544 F2Z2W6;F2Z2Y5;H7BXJ5;A0A494C035;P05114 HMGN1 Non-histone chromosomal protein HMG-14 yes no 0 0 1 4 0.816 1 1 1 39.12 39.182 3 1.5895E-06 9245 20230619_1882_Aki_TMTPro18x_K_F3 141.37 114.04 248000 126580 325950 292840 530770 565940 352900 474420 354590 265910 442430 458200 347280 326040 482630 128560 381220 287510 229380 117420 327450 285330 529930 549020 366640 484860 364270 285740 446030 451570 363860 330160 480750 142560 365080 271740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 672160000 29893 1544 28076 56136;56137;56138 45320;45321 45320 2 9606 Homo sapiens 0.007552382844778549 VSSDNVADLHEK Unmodified 1312.6259 0.62590859 3517 P28074;A0A140VJS7;P28074-3 PSMB5 Proteasome subunit beta type-5 yes no 0 0 0 2 0 1 40.844 40.918 3 0.0020247 10222 20230619_1881_Aki_TMTPro18x_K_F2 82.481 67.605 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29894 3517 28077 56139 45322 45322 1 9606 Homo sapiens -0.017899323753454155 VSSFEEK Unmodified 824.3916 0.39159855 297 Q75MT9;Q6FHZ0;A0A024R4K3;P40926;Q0QF37;P40926-2;G3XAL0;B3KTM1 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial yes no 0 0 0 3.5 0.5 2 2 45.129 45.189 2;3 0.0045035 11794 20230619_1883_Aki_TMTPro18x_K_F4 110.61 45.808 587600 310270 807780 856400 1003800 1172400 819700 978180 884370 675220 1212900 1534900 1006900 965290 1128900 441620 1322200 1360400 543820 288790 805520 822790 1022100 1155600 840110 1004600 908890 724640 1222400 1497700 1040700 987030 1152600 505970 1263500 1282200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1100600000 29895 297 28078 56140;56141;56142;56143 45323;45324 45324 2 9606 Homo sapiens -0.02762158673237991 VSSGYVPPPVATPFSSK Unmodified 1718.8879 0.88793694 3947 Q15942;Q96AF9;Q28617;B4DY85;Q9BUS0;Q15942-2;H7C3R3 ZYX Zyxin yes no 0 0 0 3.2 0.748 1 2 2 58.089 58.109 3 3.2964E-09 17615 20230619_1882_Aki_TMTPro18x_K_F3 128.28 114.6 49364 43922 45766 56322 48472 58783 66094 69247 80279 76270 67596 61217 75647 61433 71403 79591 64143 72919 45643 40301 46917 55889 50669 59473 66034 70175 80486 76251 70267 62871 76722 64346 72332 79293 61503 69297 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 279990000 29896 3947 28079 56144;56145;56146;56147;56148 45325;45326;45327 45325 3 9606 Homo sapiens 0.057248489207267994 VSSLPLLLPYWR Unmodified 1442.8286 0.82857157 1185 A0A140VJL6;Q2TAA2;H7C5G1;Q6NVV8;Q05D21;Q2TAA2-2;Q6PCA9 IAH1 Isoamyl acetate-hydrolyzing esterase 1 homolog yes no 0 0 0 8 0 1 65.224 65.243 3 0.00017373 20061 20230619_1888_Aki_TMTPro18x_K_F8 101.39 74.795 6141.5 8094.8 7659.4 10781 6372.9 9781.9 6634.2 7612.2 11547 7419.6 7223.6 6477.2 6776.9 7238 8136.2 8372.3 7603 6725.3 5712.2 7422.1 7655.9 10644 6756.4 9909.6 6828.1 7925.3 11300 7493.8 7591.7 6649.9 7007.6 7492.6 8221.3 8304 7273.5 6408.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9672400 29897 1185 28080 56149 45328 45328 1 9606 Homo sapiens 0.1248704248789636 VSSPTVNTTLR Unmodified 1173.6354 0.63535107 740 A0A024RCZ8;Q9NSK0;Q9NSK0-3;Q9NSK0-5 KLC4 Kinesin light chain 4 yes no 0 0 0 1 0 1 41.596 41.596 2 0.00063747 10788 20230619_1880_Aki_TMTPro18x_K_F1 112.95 67.228 62419 54038 62165 61034 91105 108090 79915 82539 125190 57323 73109 70087 64158 54186 69449 67438 81795 76336 57736 49526 63613 61676 92190 105110 82561 85369 122650 59832 77045 70087 66058 57126 71194 68059 78104 72430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26075000 29898 740 28081 56150 45329 45329 1 9606 Homo sapiens 0.055478807008285 VSSSSFR Unmodified 768.37662 0.37661719 3832 Q13057;Q13057-2;K7EQ60 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes no 0 0 0 8 0 1 35.376 35.365 2 0.022146 7637 20230619_1888_Aki_TMTPro18x_K_F8 102.3 61.175 64117 33553 61182 66132 89413 97690 80149 96520 112830 57622 84958 85192 77758 72320 86324 43559 101010 82829 59131 31034 62854 64464 90448 96280 82353 97576 111760 61252 88178 84774 80063 73519 88185 46586 96374 78321 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32262000 29899 3832 28082 56151 45330 45330 1 9606 Homo sapiens -0.016836057505656754 VSSTGLSLK Unmodified 890.5073 0.50729701 3949 Q16352;Q59EM6;B4DE66 INA Alpha-internexin yes no 0 0 0 2 0 1 48.859 48.924 2 0.00078841 13955 20230619_1881_Aki_TMTPro18x_K_F2 123.35 66.074 272400 237370 299200 215820 67139 103860 141510 102540 151780 210160 230440 237730 203480 177640 233320 268240 250570 207940 252190 217160 297630 218690 90282 113730 139110 108100 157260 207350 231670 238070 209980 189850 237870 264630 239280 198290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159490000 29900 3949 28083 56152 45331 45331 1 9606 Homo sapiens 0.05766365177623811 VSSVALCK Unmodified 862.45824 0.45823833 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 2 0 1 46.646 46.725 2 1.0793E-05 12923 20230619_1881_Aki_TMTPro18x_K_F2 147.16 108.35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29901 4386 28084 56153 45332 45332 1 9606 Homo sapiens 0.02150753617013379 VSSVFKDEATVR Unmodified 1336.6987 0.69867961 162 A0A024R1U0;P46060;B4DY16;B4E0U0;Q9BSK3 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 1 7.5 0.5 1 1 47.016 47.084 3 0.0047662 12304 20230619_1888_Aki_TMTPro18x_K_F8 71.912 60.344 194990 191780 218610 209860 243300 228740 274730 230590 204980 218460 217830 111030 134520 92253 259960 79891 87873 70900 180710 175640 220420 210830 250980 230090 272970 235180 213310 218070 218810 117080 145500 95333 251650 80598 85622 67499 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140000000 29902 162 28085 56154;56155 45333 45333 1 9606 Homo sapiens 0.04379821418069696 VSSVLALVGK Unmodified 971.60153 0.60153174 1285 A0A1K0FUB6;Q8WWM9;K7EMC7;K7EIM9 CYGB Cytoglobin yes no 0 0 0 5.5 0.5 1 1 63.249 63.296 3 0.00038393 19414 20230619_1885_Aki_TMTPro18x_K_F5 108.43 27.678 461330 415580 381040 366180 261800 317950 371760 406940 525170 459320 295770 228780 475080 277070 218740 612420 391880 247820 426240 380060 391860 373830 285040 327520 373260 410750 517450 454520 321280 245120 466450 302150 238640 588400 372280 239770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 357590000 29903 1285 28086 56156;56157 45334;45335;45336 45334 3 9606 Homo sapiens 0.11459503999753906 VSSVPDNYR Unmodified 1035.4985 0.49852324 4157 Q7L8W6 DPH6 Diphthine--ammonia ligase yes yes 0 0 0 5 0 1 39.582 39.672 2 0.00035286 9377 20230619_1885_Aki_TMTPro18x_K_F5 109.71 93.512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29904 4157 28087 56158 45337 45337 1 9606 Homo sapiens -0.017806084588755766 VSTALSCLLGLPLR Unmodified 1498.8541 0.85413439 2123 A8K8K1;O00442;O00442-2;A6NIC1;B4DSL0 RTCA RNA 3'-terminal phosphate cyclase yes no 0 0 0 7.5 0.5 1 1 65.446 65.469 3 3.8731E-09 20123 20230619_1888_Aki_TMTPro18x_K_F8 163.99 140.56 5659.9 3755.1 3696.4 3694.3 4362.4 6052.7 5739.6 6933 6351 3579 5277.6 5292.1 6265.7 4308.9 4921.1 5922.1 5711.2 5886.7 5212.3 3441.3 3931 3771.1 4530.5 5958 5726 6925.4 6380.1 3850.8 5507.8 5269.8 6293.6 4565.6 5076.8 5919.9 5458 5590.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18101000 29905 2123 28088 56159;56160 45338 45338 1 9606 Homo sapiens 0.12466148947987676 VSTAVLSITAK Unmodified 1088.6441 0.64412484 832 Q99460;A0A087WW66;Q99460-2;B2R6D0;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;A0A7I2V479 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 3.5 0.5 1 1 56.889 56.908 3 1.0083E-05 17181 20230619_1882_Aki_TMTPro18x_K_F3 143.5 118.65 125140 108420 119880 135450 122780 152970 138000 133100 162390 139830 132860 130280 122130 113850 136260 146080 144160 137840 115710 99462 122380 134770 127890 152850 138990 137550 162830 140730 137260 132160 125750 119640 138800 145790 137810 131030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143700000 29906 832 28089 56161;56162 45339;45340 45339 2 9606 Homo sapiens 0.10334854337338584 VSTDLLR Unmodified 802.45487 0.45486751 1871 A0A994J4Y8;Q96HS1-2;Q96HS1;F5GXG4 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 0 0 0 6.5 0.5 1 1 46.267 46.352 2 0.075013 11906 20230619_1887_Aki_TMTPro18x_K_F7 74.929 14.539 107480 108530 117160 110380 119270 128590 132280 124090 160050 86031 109260 95627 89754 84677 117870 122770 105450 87138 99602 99331 118210 111650 124050 128600 133430 126090 159150 89424 113600 96456 93638 89609 118710 120770 100890 83209 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232500000 29907 1871 28090 56163;56164 45341 45341 1 9606 Homo sapiens 0.04573826834666761 VSTEVDAR Unmodified 875.43486 0.43486035 1232 A0A140VK56;P37837-2;P37837;F2Z393;B4DID5 TALDO1 Transaldolase yes no 0 0 0 2 0 1 34.443 34.5 2 0.0062321 7451 20230619_1881_Aki_TMTPro18x_K_F2 111.17 67.05 103090 49841 137140 137520 205220 212260 145010 212900 160430 101960 180690 232160 143050 158100 193350 62437 201550 199650 95343 46415 137470 132490 205970 208770 150400 214280 163110 112910 183240 226970 149820 160410 195430 72417 192750 188180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142850000 29908 1232 28091 56165 45342 45342 1 9606 Homo sapiens -0.00783968895950693 VSTLGLYMEANR Unmodified 1352.6758 0.67583567 4583 Q9NR50;Q9NR50-3;Q9NR50-2;Q9HA31;H0Y580 EIF2B3 Translation initiation factor eIF-2B subunit gamma yes no 0 0 0 3.33 3.3 2 1 56.791 56.791 2;3 5.0584E-07 17182 20230619_1880_Aki_TMTPro18x_K_F1 117.21 97.965 97479 81664 87496 92831 79093 95126 92516 89484 110820 107030 103330 94160 105570 93378 106560 114800 103680 101690 90073 74859 89623 92885 83291 95897 93081 92290 111580 106870 106430 96192 107740 97460 108220 114270 99212 96734 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 25842000 29909 4583 28092 56166;56167;56168 45343;45344;45345 45344 3 9606 Homo sapiens 0.013604790289718949 VSTLPAITLK Unmodified 1041.6434 0.64339656 1270 F8W787;A0A1B0GW44;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;V9HWI3;C9JH19;P07339;A0A1B0GU92;A0A1B0GU03;H7C469 CTSD;HEL-S-130P Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 0 0 0 3.5 0.5 1 1 58.905 58.921 2;3 1.0618E-06 17861 20230619_1883_Aki_TMTPro18x_K_F4 137.95 92.993 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29910 1270 28093 56169;56170 45346;45347 45347 2 9606 Homo sapiens 0.12424059688260058 VSTSPLTK Unmodified 831.47018 0.47018322 2245 B7Z4Y0;B2R7I0;Q9Y320-2;Q9Y320 TMX2 Thioredoxin-related transmembrane protein 2 yes no 0 0 0 2 0 1 44.146 44.228 2 0.089351 11788 20230619_1881_Aki_TMTPro18x_K_F2 59.35 24.948 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29911 2245 28094 56171 45348 45348 1 9606 Homo sapiens 0.047706936318604676 VSTTLNVAQAYYAR Unmodified 1555.7995 0.79945628 2174 E9PDF6;B0I1S9;O43795-2;O43795 MYO1B Unconventional myosin-Ib yes no 0 0 0 4 0 1 54.07 54.086 3 1.4952E-08 15826 20230619_1883_Aki_TMTPro18x_K_F4 146.79 120.74 62896 47621 59001 63071 54823 73149 66332 63852 95563 65974 66043 60495 64131 59514 73802 73425 68664 68353 58101 43737 60240 62542 57747 72947 67089 65937 94419 66482 69046 61670 66018 62136 74592 73285 65745 64976 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86623000 29912 2174 28095 56172 45349 45349 1 9606 Homo sapiens 0.043788534009536306 VSTVAGIGIQGTDK Unmodified 1344.7249 0.72489436 4242 Q8NBF2 NHLRC2 NHL repeat-containing protein 2 yes yes 0 0 0 8 0 1 52.238 52.315 2 4.958E-05 14540 20230619_1888_Aki_TMTPro18x_K_F8 142.1 119.97 32310 26742 23922 33422 24544 29230 26581 26716 30123 36160 35329 39481 41562 33374 32983 47185 40216 34994 29814 24538 25064 33133 25543 29818 26801 27737 30733 36129 36296 39724 41804 35342 34167 46473 38372 33386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101280000 29913 4242 28096 56173 45350 45350 1 9606 Homo sapiens 0.06632090589550899 VSTVFWK Unmodified 865.46979 0.46978929 3152 J9R021;Q14152;Q24JU4;Q14152-2;Q7Z5T5;Q6P1R0;Q05BS0;Q3B770 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 0 4 0 1 58.307 58.309 3 0.02988 17685 20230619_1883_Aki_TMTPro18x_K_F4 69.383 45.827 17139 15020 21452 19123 16377 22610 24033 19177 23209 19112 20737 18736 18652 20325 17430 22286 19790 20556 15888 13781 21353 19024 17632 22506 23756 19841 23570 19324 21291 19107 19079 20995 17904 22256 18917 19539 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57444000 29914 3152 28097 56174 45351 45351 1 9606 Homo sapiens 0.03167318702662669 VSTVMDTVGR Unmodified 1063.5332 0.53319418 4531 Q9H845;Q9H9W4;H0Y8Z9;Q9BUX5;A0A7P0T8U3;A0A7P0T871;A0A7P0T7Z1 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 0 7.5 0.5 1 1 48.452 48.528 2 3.8797E-07 12895 20230619_1888_Aki_TMTPro18x_K_F8 188.66 153.3 179800 142960 154520 182040 169530 190560 180760 166330 225010 199180 223810 217200 224490 180680 206700 227870 240720 231870 166030 131220 159460 180680 175370 191500 182940 172570 226580 200170 229650 218500 228210 190120 212480 228390 229930 220220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168470000 29915 4531 28098 56175;56176 45352;45353 45353 2 9606 Homo sapiens 0.003968913575818078 VSVEYTEK Unmodified 953.47058 0.47057715 4312 Q92979;A8K6D2;A0A087WVM7 EMG1 Ribosomal RNA small subunit methyltransferase NEP1 yes no 0 0 0 4 0 1 44.849 44.893 2 0.0011758 11675 20230619_1883_Aki_TMTPro18x_K_F4 147.29 90.742 101960 61967 105650 117000 135100 131350 125400 123770 163180 147950 163190 167810 181230 150890 129130 117750 195620 180290 94153 57230 107510 113710 137640 131510 128160 127620 164090 148880 168170 168740 181940 154570 135800 122420 186420 170630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91390000 29916 4312 28099 56177 45354 45354 1 9606 Homo sapiens -0.00801931438934389 VSVPLLK Unmodified 754.49528 0.49527576 1722 A0A804HL62;A0A804HIN6;Q9BTW9-4;J3KR97;A0A804HLF8;A0A804HJY5;A0A804HIU1;A0A804HLI2;A0A804HHW7;Q9BTW9;A0A804HI57;A0A804HKT8;A0A804HJ32;A0A804HI02;A0A804HJU6;A0A0J9YVR1;A0A0J9YWI5;Q9BTW9-2 TBCD Tubulin-specific chaperone D yes no 0 0 0 3 0 1 55.936 55.977 2 0.019836 16800 20230619_1882_Aki_TMTPro18x_K_F3 105.39 33.157 133780 118140 124610 131580 110020 120790 127080 124450 150420 141760 146940 150890 153090 132220 159860 157260 157600 174070 123690 108250 127160 131690 115940 123100 127900 127400 151760 142630 151260 152130 156390 138340 162300 158580 150930 165090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 179300000 29917 1722 28100 56178 45355 45355 1 9606 Homo sapiens 0.10820793225093439 VSVPTHPEAVGDASLTVVK Unmodified 1905.0207 0.020742027 628 E9PF17;A0A024RAP3;A0A024RAL1;A0A024RAQ9;Q59FG9;P13611-4;P13611-3;P13611-2;P13611-5;P13611;Q86W61;D6RGZ6;A0A1B1PFX2 VCAN;CSPG2 Versican core protein yes no 0 0 0 7 0 1 52.193 52.267 3 9.0422E-11 14544 20230619_1887_Aki_TMTPro18x_K_F7 140.16 125.23 76087 63109 64007 71616 73098 93829 76430 81756 93495 82046 78706 90938 81345 73268 92413 81924 83786 92660 70269 57851 66225 71917 75459 92891 77398 84337 93687 83195 81683 91256 83489 76612 93245 82828 80311 87862 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91331000 29918 628 28101 56179 45356;45357 45356 2 9606 Homo sapiens 0.10443248586716436 VSVVPDEVATIAAEVTSFSNR Unmodified 2190.1168 0.11682726 4254 Q8NFF5-2;Q8NFF5;Q8NFF5-3;Q5T196;B3KQW9;Q8NFF5-4;Q8NFF5-5 FLAD1 FAD synthase;Molybdenum cofactor biosynthesis protein-like region;FAD synthase region yes no 0 0 0 7 0.816 1 1 1 66.421 66.449 3 5.4351E-23 20542 20230619_1888_Aki_TMTPro18x_K_F8 186.45 173.91 35451 32198 38735 44710 40652 42376 45064 48896 46466 44289 51950 43205 51823 46804 50049 59302 59593 57377 32828 29567 39140 44086 42154 43172 45245 49372 47462 44973 52985 44112 52838 48811 51502 59255 56911 54526 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 110080000 29919 4254 28102 56180;56181;56182 45358;45359 45359 2 9606 Homo sapiens 0.06937351636179301 VSWQDLK Unmodified 874.45487 0.45486751 393 A0A024R6D8;Q13243-3;Q13243 SFRS5;SRSF5 Serine/arginine-rich splicing factor 5 yes no 0 0 0 8 0 1 54.985 55.052 2 0.035759 15737 20230619_1888_Aki_TMTPro18x_K_F8 92.653 38.104 531050 420990 446740 541160 466360 621890 582690 577480 649300 613540 533850 581620 629000 501730 577070 623810 677820 613320 490310 386460 461900 537510 487060 621360 582670 593960 653300 617230 557740 588980 636430 526840 593490 624210 647120 582880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 303230000 29920 393 28103 56183 45360 45360 1 9606 Homo sapiens 0.012618268346727746 VSWSPAEDHNAPIEK Unmodified 1678.7951 0.79509919 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;Q86SE4 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 4.5 0.5 1 1 47.619 47.678 3 1.8139E-08 12915 20230619_1883_Aki_TMTPro18x_K_F4 142.91 109.96 194190 153550 181750 203160 141900 155420 198380 205130 228810 256100 272740 314870 304180 263340 250170 289080 307080 324400 179430 141000 185200 200500 152100 161930 197790 207560 233210 257750 279380 315060 306930 274690 258700 291970 293380 307680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 125280000 29921 2005 28104 56184;56185 45361;45362 45361 2 9606 Homo sapiens -0.01714655812611454 VSYARPSSEVIK Unmodified 1334.7194 0.71941505 3938 Q15717;Q15717-2;M0QZR9;M0R055 ELAVL1 ELAV-like protein 1 yes no 0 0 1 4.5 3.5 1 1 42.212 42.213 3 0.0016018 11046 20230619_1880_Aki_TMTPro18x_K_F1 86.43 40.457 550340 515350 532800 545490 603910 598410 618830 634320 656800 463740 483750 337750 414160 295670 548790 543320 484230 291540 509210 471930 543770 549460 621500 602280 624250 640850 659470 474190 500780 348210 430980 319430 552040 527990 462600 280280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 204780000 29922 3938 28105 56186;56187 45363;45364 45363 2 9606 Homo sapiens 0.06544411797744942 VSYFAVFDGHGGIR Unmodified 1523.7521 0.75211216 4493 Q9H0C8;E9PC05 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C yes no 0 0 0 2 0 1 57.015 57.031 3 3.809E-12 17406 20230619_1881_Aki_TMTPro18x_K_F2 187.74 167.98 33287 33019 35891 38081 38437 39626 36183 35876 41674 40782 40031 38655 42948 36102 43975 41477 35415 42249 30841 30255 36287 38067 39639 39885 36795 37048 42099 40896 41279 39254 43773 37617 44215 41649 34015 40095 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37746000 29923 4493 28106 56188 45365 45365 1 9606 Homo sapiens 0.011186189206000563 VSYGIGDEEHDQEGR Unmodified 1689.7231 0.72305646 3515 Q5TZP7;P27695;G3V3M6;G3V3C7;G3V5M0;G3V359 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 0 2 0.816 1 1 1 38.717 38.757 3 4.0736E-52 9498 20230619_1880_Aki_TMTPro18x_K_F1 296.25 284.11 578010 427410 542690 597460 644740 628250 616720 569150 600670 676780 739710 733300 684410 602150 688890 761700 798190 757280 533880 392820 555960 589580 660130 631730 623070 588670 618770 679750 750070 737530 700670 633750 706850 762440 762360 719470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1869399999.9999998 29924 3515 28107 56189;56190;56191 45366;45367 45366 2 9606 Homo sapiens -0.09421614957000202 VSYIGVCQSK Unmodified 1139.5645 0.56449431 4015 Q56VL3 OCIAD2 OCIA domain-containing protein 2 yes yes 0 0 0 2.5 0.5 1 1 48.223 48.298 3 0.00021212 13655 20230619_1881_Aki_TMTPro18x_K_F2 98.04 63.655 127660 91586 149790 89609 125180 134090 119960 128780 146020 123440 127430 117520 157070 108930 103680 156700 164810 133660 118120 83898 149560 91441 131780 132150 122190 131690 146530 124900 132780 119420 156740 115260 110020 155240 156880 127310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 337640000 29925 4015 28108 56192;56193 45368 45368 1 9606 Homo sapiens 0.0002946439167317294 VSYLRPLDFEEAR Unmodified 1593.8151 0.81510635 1265 A0A6Q8PHL8;A0A6Q8PH45;A0A1B0GUA3;Q96EK5;A0A6Q8PGG2 KIAA1279 KIF1-binding protein yes no 0 0 1 6.5 0.5 1 1 54.756 54.826 3 8.6614E-11 15692 20230619_1887_Aki_TMTPro18x_K_F7 159 129.68 173350 150870 158390 175040 148450 187370 177980 171000 215210 190310 177970 174540 194720 159900 172950 220450 207210 204600 160240 138300 162130 174960 156050 188130 178870 176370 215630 190900 185050 177490 197190 168650 178400 219520 197910 194510 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 139160000 29926 1265 28109 56194;56195 45369;45370;45371 45370 3 9606 Homo sapiens 0.04195139917965207 VSYLVFDEADR Unmodified 1312.6299 0.62993134 4199 Q86XP3;Q86XP3-2;B3KTL4;B3KX23;T2DQ69 DDX42 ATP-dependent RNA helicase DDX42 yes no 0 0 0 3 0.816 1 1 1 58.989 59.01 2 4.8459E-12 18020 20230619_1882_Aki_TMTPro18x_K_F3 206.73 175.35 90216 76882 89092 88579 83844 102820 103100 104340 116860 120090 118850 121770 132840 116410 123570 131120 120810 142960 83433 70480 90536 88718 88110 102920 103280 106890 118390 120570 122500 123360 134700 121050 125720 132170 115770 135580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133590000 29927 4199 28110 56196;56197;56198 45372;45373 45372 2 9606 Homo sapiens -0.013878428816497035 VSYYENVIK Unmodified 1113.5706 0.57062555 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2;A0A0C4DGZ5;A0A6Q8PFX4;A0A6Q8PFC1;A0A6Q8PF15 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 7.5 0.5 1 1 53.71 53.777 2;3 0.003814 15220 20230619_1887_Aki_TMTPro18x_K_F7 78.816 46.595 68321 58143 65424 74176 56826 68522 74892 72575 83446 79043 76716 75306 78062 60235 85487 78056 70244 75542 63168 53355 66637 73516 60243 69797 74730 74058 84250 79416 79107 76105 79920 63605 85919 78040 67393 71758 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235190000 29928 1102 28111 56199;56200 45374;45375 45374 2 9606 Homo sapiens 0.018383058948302278 VTADVINAAEK Unmodified 1129.5979 0.59790293 1334 O43175;A0A286YF22;V9HW79;A0A2C9F2M7;B3KSC3;A0A286YFA2;A0A286YFL2;A0A286YFM8;A0A286YFB2;A0A286YFC8;A0A286YER3;A0A286YF34 PHGDH;HEL-S-113 D-3-phosphoglycerate dehydrogenase yes no 0 0 0 4 0.816 1 1 1 51.302 51.36 3 5.464E-05 14366 20230619_1885_Aki_TMTPro18x_K_F5 129.82 70.393 1338200 1026400 1107500 1281200 1206400 1460600 1167100 1166100 1480000 1359200 1867900 2065900 1503600 1498800 1905600 1709000 1885300 2261700 1235200 942070 1146800 1274800 1246500 1456400 1189200 1217500 1504100 1385000 1884200 2045500 1566600 1575100 1928600 1745400 1806700 2141000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1499699999.9999998 29929 1334 28112 56201;56202;56203 45376;45377 45377 2 9606 Homo sapiens 0.03828789435215185 VTAEVVLAHLGGGSTSR Unmodified 1652.8846 0.8845829 3384 P04843;Q6IBR0;Q53EP4;Q96HX3;F8WF32 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 0 0 0 2.5 0.5 1 1 54.47 54.506 3 0.018294 16437 20230619_1881_Aki_TMTPro18x_K_F2 53.453 25.79 31120 32519 33343 31752 34009 39349 38413 36712 34272 36613 35033 38526 37351 30267 40399 46477 44643 43026 28842 29749 33692 32256 35379 39167 38354 37684 35204 37053 36054 38755 38190 32351 41294 46230 42662 40909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 279380000 29930 3384 28113 56204;56205 45378 45378 1 9606 Homo sapiens 0.0842559886671097 VTAFLDDLSQK Unmodified 1235.6398 0.63976774 2141 A8K9T8;Q9BYT8;B3KU23;E9PCB6;Q9BQD0;H0YAK4;Q96K48 NLN Neurolysin, mitochondrial yes no 0 0 0 7 0 1 63.147 63.179 3 0.00099345 19291 20230619_1887_Aki_TMTPro18x_K_F7 90.913 62.709 301770 258430 348710 375420 292820 381020 355050 449420 455130 509850 392900 442280 479790 405400 377630 428870 492050 563150 279480 237480 349720 369560 310720 386140 357780 455630 456100 509750 410090 450340 482180 421010 392390 437930 470180 533200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 410470000 29931 2141 28114 56206 45379 45379 1 9606 Homo sapiens 0.031373451237413974 VTAHWEK Unmodified 869.43955 0.43955179 1167 A0A140VJD0;Q9UFC0;H7C5S6;Q59FT0 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 0 0 0 7 0 1 40.394 40.461 3 0.015053 9442 20230619_1887_Aki_TMTPro18x_K_F7 84.743 5.9729 116360 84633 107670 111930 133540 144430 137680 135450 179550 127390 132880 127470 139900 117740 134580 125500 148390 128790 107450 77741 110520 111210 136840 143350 139800 138760 178530 129300 138810 129090 142330 122200 137640 126230 141710 122360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42119000 29932 1167 28115 56207 45380 45380 1 9606 Homo sapiens -0.0003903996253029618 VTAIHIDPATHR Unmodified 1329.7153 0.71533272 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 7 0.816 1 1 1 37.907 37.948 4 1.5809000000000001E-31 8414 20230619_1887_Aki_TMTPro18x_K_F7 228.93 177.65 174420 131750 156760 146180 120820 135290 135780 140160 152530 188000 204830 187700 195660 163090 161960 211670 204500 180000 161070 120800 160080 146410 128820 137810 136710 144140 156630 187340 207120 189810 198370 171580 167900 210030 195080 171390 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1745599999.9999998 29933 3606 28116 56208;56209;56210 45381;45382;45383 45382 3 9606 Homo sapiens 0.06366367094710768 VTALCWHPTK Unmodified 1211.6121 0.61211321 2710 Q8TEQ6;B7ZLC9;Q58EZ8 GEMIN5 Gem-associated protein 5 yes no 0 0 0 4 0 1 49.159 49.197 3 0.0026907 13615 20230619_1883_Aki_TMTPro18x_K_F4 79.82 53.777 106410 82101 105790 103850 114570 133780 118390 112150 131770 127540 115560 120250 126520 111610 119470 146950 135130 135190 98358 75362 107650 103470 118480 132480 119560 116480 132900 127890 119860 122130 128510 117260 122620 146370 129140 128530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60597000 29934 2710 28117 56211 45384 45384 1 9606 Homo sapiens 0.014771633825148456 VTAPDVDLHLK Unmodified 1206.6608 0.66083754 3815 Q09666;Q6ZQN2 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 0 0 0 6 0 1 51.361 51.438 3 1.5112E-06 14506 20230619_1886_Aki_TMTPro18x_K_F6 141.73 100.44 146490 99914 117270 97073 110850 135880 155970 160210 190740 174460 196760 220270 216170 189710 223090 237800 225190 259970 135090 91542 121380 98939 117080 135020 155710 162280 192500 176950 202660 220530 220380 199210 226940 239380 215680 246560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61054000 29935 3815 28118 56212 45385 45385 1 9606 Homo sapiens 0.06577355223271297 VTAQGPGLEPSGNIANK Unmodified 1651.8529 0.85294842 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98 FLNA Filamin-A yes no 0 0 0 6.5 0.5 1 1 48.543 48.626 3 8.7818E-24 12954 20230619_1887_Aki_TMTPro18x_K_F7 208.66 190.29 106640 85089 92304 101710 139210 199010 144200 119310 177290 134650 157270 170500 141850 124130 137390 132290 152430 164660 98485 78051 95809 102540 141460 191890 145970 127820 177770 136510 161710 169790 145090 130010 140600 134650 145780 156010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 640270000 29936 3484 28119 56213;56214 45386;45387 45387 2 9606 Homo sapiens 0.053096061128144356 VTAVDWHFEEAVDGECPPQR Unmodified 2341.0433 0.043344738 2980 F8VPD4;P27708;Q53SY7;H7C3Z5 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 2.5 0.5 1 1 55.984 56.012 3 7.1705E-30 16989 20230619_1881_Aki_TMTPro18x_K_F2 206.98 202.72 54982 47679 54288 56259 155980 58906 63325 63678 66049 73445 61002 67917 81585 79178 65101 78448 75027 81974 50854 43716 56574 56165 150590 59806 69299 64974 67179 73536 63774 69553 81905 81238 67111 79013 71737 77797 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168520000 29937 2980 28120 56215;56216 45388;45389 45388 2 9606 Homo sapiens -0.0735352007795882 VTAVIPCFPYAR Unmodified 1392.7224 0.72239194 3683;2257 Q53FW2;P60891;B1ALA9;A0A2R8Y7H4;P60891-2;A0A6Q8PHK9;B1ALA7;B2R860;P11908;A0A140VK41;P11908-2;D3YTJ7;A6NMS2 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 0 0 5 0 1 61.379 61.429 3 7.6809E-05 18494 20230619_1885_Aki_TMTPro18x_K_F5 84.479 65.38 255800 208160 253580 263030 233470 266080 256320 258040 288580 278040 251930 245880 276630 234910 271380 304850 286350 283190 236510 191030 257520 261180 244810 268630 258200 264720 290820 278980 261300 250790 281340 246390 277060 303920 273820 269220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 300350000 29938 3683;2257 28121 56217 45390;45391 45391 2 9606 Homo sapiens 0.04173963650919177 VTCLESGLR Unmodified 1033.5226 0.5226295 2339 Q96CP5;B3KM34;O75439;G3V0E4;A8K1E9;F8WEA6;F8WBE1;F8WAZ6 PMPCB Mitochondrial-processing peptidase subunit beta yes no 0 0 0 6 0 1 46.612 46.695 2 4.3072E-06 12464 20230619_1886_Aki_TMTPro18x_K_F6 185.47 147.33 135560 123150 129140 144780 152740 142170 152320 147320 175690 155400 177010 160020 161200 135780 150660 177860 191100 164600 125390 112900 132130 144430 156600 144180 154320 150400 177630 156790 180730 161540 164560 143070 155760 177240 182270 156580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201780000 29939 2339 28122 56218 45392 45392 1 9606 Homo sapiens 0.007209087031696981 VTDAIVLLDREQGGK Unmodified 1612.8784 0.87843489 2076 A8K5J1;P11172;B5LY71;P11172-3;B5LY69;E9PFD2;B5LY67 UMPS Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes no 0 0 1 6.5 0.5 1 1 57.351 57.415 3 2.4308E-10 16763 20230619_1887_Aki_TMTPro18x_K_F7 147.75 126.5 132400 119650 121920 116930 128470 120200 120560 135400 126800 146280 137170 112750 152000 118590 135430 163780 151950 138020 122420 109500 124750 118480 132560 121790 122310 137490 129400 146180 140740 116330 153810 124580 139070 162330 145130 131420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237160000 29940 2076 28123 56219;56220 45393 45393 1 9606 Homo sapiens 0.09651080635217113 VTDALNATR Unmodified 959.50361 0.50360861 272 P10809;A0A024R3X4;B3GQS7;A0A7I2V599;B7Z597;A0A7I2V2X6;B7Z5E7;B7Z4F6;A0A7I2YQK6 HSPD1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 6 0.816 1 1 1 42.128 42.213 2 0.00020012 10399 20230619_1886_Aki_TMTPro18x_K_F6 141.02 110.94 851480 545670 767640 841930 934940 1046500 1012300 855360 1278800 883860 1014300 1060200 1052700 876150 1089700 916020 1156200 1090400 785630 502420 789870 827980 960650 1037900 1023600 888360 1275800 898160 1055300 1061700 1075000 912210 1110000 930280 1105200 1034100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2980599999.9999995 29941 272 28124 56221;56222;56223 45394;45395 45395 2 9606 Homo sapiens 0.022236954037566647 VTDAPTYTTR Unmodified 1123.551 0.55095274 4624 Q9NXV6;Q7Z335;J3KNE1;D6RGD2 CDKN2AIP;DKFZp686M0665 CDKN2A-interacting protein yes no 0 0 0 4.5 0.5 1 1 38.557 38.625 2 0.011041 8986 20230619_1885_Aki_TMTPro18x_K_F5 93.098 73.745 27027 21448 29829 31387 36894 36571 36662 39507 40867 36045 46640 48801 43543 40863 42725 35501 54118 49122 25008 19717 30182 30943 37716 36651 37120 40056 41597 37000 47464 48677 44533 42124 44044 36553 51635 46530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59301000 29942 4624 28125 56224;56225 45396 45396 1 9606 Homo sapiens -0.005880701159185264 VTDDLVCLVYK Unmodified 1323.6744 0.67443869 3608 P49458;Q8WVW9 SRP9 Signal recognition particle 9 kDa protein yes no 0 0 0 6 0 1 62.789 62.838 3 0.00029348 19404 20230619_1886_Aki_TMTPro18x_K_F6 103.22 64.587 64979 52273 62372 66652 61035 71180 74707 70059 78263 74256 69672 66521 74201 66054 72624 81450 74840 81883 60058 47978 63594 66189 63894 71595 74632 71773 79196 74601 72083 67895 75537 68967 74051 81600 71634 77742 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26973000 29943 3608 28126 56226 45397 45397 1 9606 Homo sapiens 0.0255484494018674 VTDETSGCSLTCAQFHPDGLIFGTGTMDSQIK Oxidation (M) 3488.5534 0.55342022 4685 Q9UMS4;H0YGZ5 PRPF19 Pre-mRNA-processing factor 19 yes no 0 1 0 6.5 0.5 1 1 61.205 61.251 4 3.0565E-30 18658 20230619_1886_Aki_TMTPro18x_K_F6 180.06 174.28 29651 20815 32427 30880 38034 30321 34892 35629 36844 40333 34422 35578 33535 31671 36600 35413 37992 41349 27414 19148 32768 30355 38874 30847 35433 36150 37372 40349 35414 36179 34425 32999 37235 35863 36360 39199 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225210000 29944 4685 28127 56227;56228 45398 45398 2856 1 9606 Homo sapiens -0.09131435620020056 VTDETSGCSLTCAQFHPDGLIFGTGTMDSQIK Unmodified 3472.5585 0.55850559 4685 Q9UMS4;H0YGZ5 PRPF19 Pre-mRNA-processing factor 19 yes no 0 0 0 7 0 1 61.898 61.937 4 1.9722E-10 18667 20230619_1887_Aki_TMTPro18x_K_F7 112.39 105.82 47241 33375 37665 44054 32939 39503 46958 33699 39826 49573 41205 44589 53251 46113 44103 55688 52302 46500 43572 30660 39034 43536 34985 40154 46289 35308 41096 49097 42770 45532 53545 48010 45521 55265 49922 44285 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 281290000 29945 4685 28127 56229 45399 45399 1 9606 Homo sapiens -0.07887131757433963 VTDFGDKVEDPTFLNQLQSGVNR Unmodified 2578.2663 0.26634504 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9;B4DSR6 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 6.5 0.5 1 1 61.654 61.701 3 1.0724E-08 18888 20230619_1886_Aki_TMTPro18x_K_F6 114.63 101.31 286640 221530 307060 299610 242730 304120 312900 356920 352780 352270 362010 348540 372410 333640 317990 382360 347520 398770 265120 203490 309260 296300 259340 308230 312900 360690 357510 356070 371310 353620 377270 347210 326320 384200 332570 378390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281950000 29946 3881 28128 56230;56231 45400;45401 45400 2 9606 Homo sapiens 0.040342521881029825 VTDIIMQK Unmodified 946.51575 0.5157532 4170 Q7Z4S6-4;Q7Z4S6-2;Q7Z4S6-3;Q7Z4S6;Q7Z4S6-5;A0A1B0GV47;Q7Z4S6-6;A0A024R0V9;H0YHT2;H0YIM6 KIF21A Kinesin-like protein KIF21A;Kinesin-like protein yes no 0 0 0 8 0 1 55.709 55.771 2 0.0086094 16045 20230619_1888_Aki_TMTPro18x_K_F8 111.04 40.125 47491 40762 44603 52145 45570 52185 45943 40293 54364 53001 52534 49976 48415 43815 53460 58766 56657 60463 43905 37406 45607 51702 47302 52496 46562 42362 54843 52812 53802 50677 49809 46187 54482 58890 54205 57396 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14342000 29947 4170 28129 56232 45402 45402 1 9606 Homo sapiens 0.040355958225973154 VTDLLGGLFSK Unmodified 1148.6441 0.64412484 3189 M0QXU7;Q9UPE4;Q53G69;O43615 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 yes no 0 0 0 4 0 1 64.975 64.985 3 0.027302 20436 20230619_1883_Aki_TMTPro18x_K_F4 55.776 36.169 13805 9594.1 11838 16733 12432 16398 14282 15900 18633 10467 10611 10496 13153 8253.3 13339 13164 12790 10148 12738 8844.7 12231 16288 12949 16575 14425 16134 18391 10884 11378 10590 13336 8855.6 13528 12982 12224 9679.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23959000 29948 3189 28130 56233 45403 45403 1 9606 Homo sapiens 0.0757485433734928 VTDTQEAECAGPPVPDPK Unmodified 1909.8728 0.87275716 1739 A0A804HKC5;Q53GE7;Q99614;A0A804HHT7;A0A804HKI4;Q53HD9;A0A804HL30 TTC1 Tetratricopeptide repeat protein 1 yes no 0 0 0 2.5 0.5 1 1 48.56 48.632 3 0.0015139 13798 20230619_1881_Aki_TMTPro18x_K_F2 72.359 61.725 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29949 1739 28131 56234;56235 45404;45405 45404 2 9606 Homo sapiens -0.045784307294525206 VTEAEIVPMGK Unmodified 1172.6111 0.61111015 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-7;E7EN95;Q68CT4;H7C5L4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 5 0 1 53.871 53.941 3 0.04262 15446 20230619_1885_Aki_TMTPro18x_K_F5 56.359 29.261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29950 3299 28132 56236 45406 45406 1 9606 Homo sapiens 0.031709042229749684 VTEALRPFHER Unmodified 1353.7153 0.71533272 912 B2RUU3;A0A2X0U2H5;A0A096LNH6;Q14185 DOCK1 Dedicator of cytokinesis protein 1 yes no 0 0 1 8 0 1 40.214 40.203 4 9.7699E-05 9552 20230619_1888_Aki_TMTPro18x_K_F8 114.86 76.228 31747 23674 30515 29062 32154 35064 36062 37032 46001 30147 36007 31640 38479 33247 26018 46130 42192 34768 29329 21727 31119 28998 33387 35044 36435 37502 45842 30917 37472 32173 38629 34901 27678 45454 40161 33170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9476400 29951 912 28133 56237 45407 45407 1 9606 Homo sapiens 0.052623670947014034 VTEAPCYPGAPSTEASGQTGPQEPTSAR Unmodified 2845.2825 0.28246539 3569 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 4 0 1 46.294 46.337 3 1.2862E-49 12309 20230619_1883_Aki_TMTPro18x_K_F4 226.67 216.99 19669 15903 17035 22387 16445 23283 18547 21325 23345 27292 25746 21470 29857 20736 22629 30718 25665 32184 18166 14612 17553 22072 17241 23412 18739 22071 23632 27081 26444 22059 29966 21976 23353 30759 24572 30529 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 62689000 29952 3569 28134 56238 45408;45409 45408 2 9606 Homo sapiens -0.0663645442791676 VTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLR Unmodified 3873.8102 0.81022307 291 Q13148;A0A0A0N0L3;A0A024R4E2;A0A0A0N0N3;A0A087WYY0;A0A087X260;G3V162;B1AKP7;K7EN94;A0A0A0N0M3;A0A087WX29;K7EJM5;A0A0A0MSV7;K7EJ99 TARDBP;TDP43 TAR DNA-binding protein 43 yes no 0 0 0 5 0 1 65.544 65.588 4 9.877700000000002E-25 20404 20230619_1885_Aki_TMTPro18x_K_F5 154.4 149.71 5131.7 4402.4 4806.1 5560.1 3079.6 5040.2 4326.3 5310.9 6438.3 7542.2 5594.6 4880.5 5021.3 4552.3 5942 4465.4 6224.8 7088.3 4744.1 4039.3 4889.2 5512.9 3386.9 5138.5 4359.2 5462.8 6413 7419.9 5751.1 5057.9 5189.4 4709 6033.5 4639.5 5959.1 6701.5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50874000 29953 291 28135 56239 45410 45410 1 9606 Homo sapiens -0.011729633811683016 VTEETVYTCTGHPLK Unmodified 1733.8294 0.82943578 2029 Q6LES9;A8K3S0;P40937;A8K4Z2;Q59GW7;P40937-2 RFC5 Replication factor C subunit 5 yes no 0 0 0 6 0 1 45.715 45.802 3 1.0908E-18 12018 20230619_1886_Aki_TMTPro18x_K_F6 197.06 173.33 96008 76602 86918 94695 73094 86052 82383 84383 90003 113910 97338 93763 111360 94221 85823 123650 111730 108630 88693 70289 88882 94036 77337 87638 82822 87119 91708 112900 100090 96137 112020 98736 89358 122830 106630 103340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199730000 29954 2029 28136 56240 45411 45411 1 9606 Homo sapiens -0.008125757160314606 VTEFDAAR Unmodified 907.43995 0.43994572 1281 Q9NRW7-2;A0A8V8TMG7;A0A2R8YD95;A0A8V8TNE7;A0A8V8TNR0;A0A8V8TNQ5;A0A8V8TMH2;A0A8V8TM05;A0A1B0GXI6;A0A8V8TLW3;B7Z5D4;A0A8V8TNG0;A0A8V8TNB6;A0A8V8TMF8;A0A2R8YE10;A0A8V8TMD1;A0A8V8TNM6;Q9NRW7;A0A8V8TLX8;A0AR27;A0A8V8TM00;B7Z5E4;A0A8V8TM10;A0A2R8YF01;A0A8V8TMG3;A0A8V8TMC6;B7Z360;A0A8V8TLU0;A0A8V8TLX3 VPS45 Vacuolar protein sorting-associated protein 45 yes no 0 0 0 3 0 1 42.231 42.294 2 0.059993 10587 20230619_1882_Aki_TMTPro18x_K_F3 74.301 51.41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29955 1281 28137 56241 45412 45412 1 9606 Homo sapiens -0.017476650333492216 VTEFGGELHEDGGK Unmodified 1473.6736 0.67358707 2761 C9JUJ0;Q9UFW8 CGGBP1 CGG triplet repeat-binding protein 1 yes no 0 0 0 2 0.816 1 1 1 46.221 46.274 3 1.2412E-11 12697 20230619_1881_Aki_TMTPro18x_K_F2 147.35 126.05 153450 128580 142790 159700 174570 233030 193910 177770 230090 179680 197460 186920 209450 171040 181470 196570 229910 221500 141830 117960 146600 159610 179710 228680 195400 185480 230890 181880 204560 188960 212070 178390 187770 198470 219450 210150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 258860000 29956 2761 28138 56242;56243;56244 45413 45413 1 9606 Homo sapiens -0.044302781751639486 VTEGGEPYR Unmodified 1006.472 0.47197413 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 2 0 1 35.759 35.816 2 5.5043E-08 7971 20230619_1881_Aki_TMTPro18x_K_F2 196.95 112.85 128250 71029 129580 132680 185980 177390 161180 178970 198220 151340 215220 225730 199920 185190 197730 101040 238520 222760 118360 65620 132360 129420 187880 175970 165130 181920 200290 156750 219420 224200 204530 187990 202790 110050 227710 210350 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 811180000 29957 3900;2497 28139 56245 45414 45414 1 9606 Homo sapiens -0.031002973501813358 VTEGLTDVILYHQPDDK Unmodified 1941.9684 0.96837211 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2V5Q6;A0A7I2YQV8;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 4.83 1.34 1 2 1 1 1 59.212 59.246 3 1.6755E-23 17550 20230619_1885_Aki_TMTPro18x_K_F5 199.61 171.32 1093300 881560 1015800 1081100 1000500 1162500 1096200 1085700 1117000 1359900 1340600 1331800 1451700 1266500 1326000 1590100 1392000 1569800 1010200 808800 1038500 1076500 1043500 1167600 1100900 1121900 1147000 1358500 1369800 1351400 1472300 1325700 1355700 1590800 1332500 1490500 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 2841800000 29958 1680;2265 28140 56246;56247;56248;56249;56250;56251 45415;45416;45417;45418;45419;45420;45421 45417 7 9606 Homo sapiens 0.03506665453141977 VTEGLTDVILYHQPDDKK Unmodified 2070.0633 0.063335123 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V346;O60506-5;A0A7I2V5Q6;A0A7I2YQV8;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 1 7 0 1 55.698 55.759 4 1.3227E-06 16012 20230619_1887_Aki_TMTPro18x_K_F7 111.33 96.366 161360 133530 159340 159860 152690 167030 169430 160040 165010 207950 198930 196640 223790 195910 200010 235330 203460 224370 149200 122470 161930 159410 159520 168240 169800 165290 169950 207190 203600 200150 226490 204180 204200 235150 194780 213150 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164740000 29959 1680;2265 28141 56252 45422 45422 1 9606 Homo sapiens 0.0711059892432786 VTEGSFVYK Unmodified 1028.5179 0.51786169 2533 Q6IAT1;B4DLV7;P50395;Q5SX87;Q5SX86;V9GYF8;Q5SX90;V9GYJ7 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 0 7.2 0.748 1 2 2 50.844 50.921 2;3 6.718E-06 13993 20230619_1887_Aki_TMTPro18x_K_F7 180.45 63.43 1100100 873110 953220 995380 1068300 1211000 1117700 1103600 1150000 1352400 1411900 1442200 1438100 1253800 1242900 1570800 1488900 1480800 1015900 800540 982560 998220 1102400 1205900 1125400 1141300 1181200 1355800 1437500 1453800 1457900 1315900 1282700 1567400 1422100 1407400 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2003699999.9999998 29960 2533 28142 56253;56254;56255;56256;56257 45423;45424;45425;45426 45425 4 9606 Homo sapiens 0.004743478320506256 VTELALTASDR Unmodified 1174.6194 0.61936665 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4 0 1 50.329 50.361 2 0.0012759 14186 20230619_1883_Aki_TMTPro18x_K_F4 97.472 58.696 218190 131880 152190 204850 206990 215420 194140 164540 244120 230160 215460 258990 253710 231330 212250 248330 267690 245440 200920 121470 161200 200800 210480 215840 197910 173530 244850 230100 224350 260460 255940 240330 219800 249050 255430 233230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 323250000 29961 3758 28143 56258 45427 45427 1 9606 Homo sapiens 0.039041744639462195 VTELEDEVR Unmodified 1088.535 0.53496832 922 U3KQC1;A0A0A0MQU0;Q9BV38;K7EIR0 WDR18 WD repeat-containing protein 18 yes no 0 0 0 1 0 1 48.154 48.154 2 1.2111E-05 13613 20230619_1880_Aki_TMTPro18x_K_F1 201.57 145.45 211820 163760 181480 217190 212200 233310 224450 216940 273930 255090 267750 272210 270090 239630 224160 301150 300170 288560 195560 150390 187560 215080 218440 234310 227090 223830 275990 256350 275070 274510 273550 251440 233370 300710 286390 274250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 134540000 29962 922 28144 56259 45428;45429 45429 2 9606 Homo sapiens -0.00575776352820867 VTEQEWR Unmodified 946.45084 0.45084476 469 A0A024R7S3;P09497-2;P09497 CLTB Clathrin light chain B yes no 0 0 0 3 0 1 40.492 40.548 2 0.021356 9849 20230619_1882_Aki_TMTPro18x_K_F3 103.35 35.273 73019 43792 71795 71640 71980 72047 81604 83780 114650 92871 101250 96792 111430 83283 79819 105000 113430 98232 67397 40365 73030 70055 75008 73073 82738 85010 114330 93526 104880 97664 111860 87544 83708 104720 108100 93428 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80463000 29963 469 28145 56260 45430 45430 1 9606 Homo sapiens -0.0245226265905103 VTESIEDIK Unmodified 1032.5339 0.53390569 4082 Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3 ZMYM4 Zinc finger MYM-type protein 4 yes no 0 0 0 3 0 1 51.935 52 2 0.0020346 15030 20230619_1882_Aki_TMTPro18x_K_F3 101.65 41.793 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29964 4082 28146 56261 45431 45431 1 9606 Homo sapiens 0.01894009278271369 VTEYLYANK Unmodified 1099.555 0.55497548 1317 A0A1W2PPH1;A0A1W2PQH3;P23368;A0A1W2PR68 ME2 NAD-dependent malic enzyme, mitochondrial yes no 0 0 0 8 0 2 53.969 54.04 2;3 0.00037284 15281 20230619_1888_Aki_TMTPro18x_K_F8 98.582 69.874 141380 120560 132770 155600 146720 157220 159260 150080 157040 161120 170230 174300 171590 147630 162800 180580 184410 195990 130700 110650 135940 154240 151570 158710 159790 154180 160680 162620 174150 175450 174690 154920 166990 181740 176310 185950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 121300000 29965 1317 28147 56262;56263 45432;45433 45432 2 9606 Homo sapiens 0.009180193778092871 VTFEDATDFFGR Unmodified 1403.6357 0.635745 4195 Q86WQ0;Q86WQ0-2 NR2C2AP Nuclear receptor 2C2-associated protein yes no 0 0 0 5 0 1 62.852 62.899 2 8.5455E-10 19235 20230619_1885_Aki_TMTPro18x_K_F5 221.83 211.87 115590 97074 108080 110670 81049 109260 110850 120080 119660 125980 111800 122320 128510 107670 111970 135120 129980 147060 106850 88986 110050 110690 87296 110810 110370 122060 121160 126850 115890 123820 129850 113040 115270 135940 124310 139490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201790000 29966 4195 28148 56264 45434 45434 1 9606 Homo sapiens -0.04992744369997126 VTFKDEPGEGSGVAR Unmodified 1547.758 0.7579854 2891 E7EMW7;O95071-2;O95071;E7ET84;E5RFK7 UBR5 E3 ubiquitin-protein ligase UBR5 yes no 0 0 1 4 0 1 42.923 42.967 3 0.0035946 10857 20230619_1883_Aki_TMTPro18x_K_F4 71.286 49.23 67260 48333 63340 71782 72146 71233 72129 71231 77438 86185 80371 63564 68452 56097 76614 65505 70449 49963 62116 44458 64841 70527 74180 72076 72903 73166 78767 85590 81708 65311 70600 58617 77354 64860 67323 47695 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39268000 29967 2891 28149 56265 45435 45435 1 9606 Homo sapiens 0.006016726415964513 VTFSCAAGFGQR Unmodified 1299.603 0.60300508 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q14203-2;Q14203-5;Q6MZZ3;E7EWF7 DCTN1;DKFZp686I0746 Dynactin subunit 1 yes no 0 0 0 3.5 0.5 1 1 50.426 50.48 2 2.4906E-09 14363 20230619_1882_Aki_TMTPro18x_K_F3 180.09 162.27 180990 148820 168980 182220 166340 190180 195460 175520 247870 221660 199180 183760 223210 205300 231400 279420 238240 203610 167270 136520 172710 181380 173920 191390 196930 181610 247620 220550 207660 189190 227590 214830 235800 275240 227640 194320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 108970000 29968 1717 28150 56266;56267 45436;45437 45436 2 9606 Homo sapiens -0.0348122997381779 VTFSEDDEIINPEDVDPSVGR Unmodified 2332.0707 0.070664925 3825 Q561W4;Q12972;A0A0A0MT09;Q38J66;Q12972-2 PPP1R8 Nuclear inhibitor of protein phosphatase 1;Activator of RNA decay yes no 0 0 0 1 0 1 61.829 61.829 3 1.273E-11 19238 20230619_1880_Aki_TMTPro18x_K_F1 131.54 124.09 9504.3 10816 9108.2 13299 12271 11274 13521 13208 14609 11764 9542.7 9026.6 13960 9597.9 13805 11821 12892 14007 8806.8 9912.3 9357.9 13196 12510 11605 13585 13324 14622 11888 10225 9311.7 14086 10018 13979 11971 12352 13276 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25355000 29969 3825 28151 56268 45438 45438 1 9606 Homo sapiens -0.042087580565748794 VTFVNFTVTR Unmodified 1182.6397 0.63970816 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5 0 1 58.479 58.535 2 0.00037327 17307 20230619_1885_Aki_TMTPro18x_K_F5 141.88 117.1 283510 291360 275680 283960 279150 364000 349740 349600 439990 112550 110970 98658 98519 91067 196140 114820 130990 94425 262510 266540 280930 288630 292150 361610 351040 351790 428840 126640 128930 100810 105760 95392 193670 114140 125710 90035 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82743000 29970 3881 28152 56269 45439 45439 1 9606 Homo sapiens 0.05569389914421663 VTGAALIPPPGGTSLTSLGQAAQ Unmodified 2106.1321 0.13208339 4436 Q9BU61;A4FU71;Q9BU61-2 NDUFAF3;C3orf60 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes no 0 0 0 2 0 1 63.442 63.45 3 0.0053336 20193 20230619_1881_Aki_TMTPro18x_K_F2 61.181 52.249 15002 15019 17895 15661 16668 18933 16690 16499 19116 17359 20634 17234 20494 20523 18442 23749 19071 25474 13914 13749 17905 15818 17410 18847 16913 17046 19390 17506 21068 17642 20843 21223 18857 23893 18285 24153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 246770000 29971 4436 28153 56270 45440 45440 1 9606 Homo sapiens 0.12326263224031209 VTGEADVEFATHEDAVAAMSK Oxidation (M) 2192.9896 0.98957783 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;H0YB39;Q68DG4;H0YBD7;H0YBG7;B4DP51 HNRNPH1;DKFZp686A15170 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 1 0 2 0 1 50.79 50.842 4 3.679E-11 14816 20230619_1881_Aki_TMTPro18x_K_F2 123.41 45.388 40191 37069 37757 42505 41420 43518 45465 39068 52148 47427 44496 42793 51072 40633 40431 48483 43929 47539 37174 33971 38640 42494 42835 43847 45793 40467 52450 47365 46281 43583 51393 42419 41539 48520 42022 45149 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123970000 29972 1427 28154 56271 45441 45441 903 1 9606 Homo sapiens -0.05919737300246197 VTGEADVEFATHEDAVAAMSK Unmodified 2176.9947 0.99466321 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;H0YB39;Q68DG4;H0YBD7;H0YBG7;B4DP51 HNRNPH1;DKFZp686A15170 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 55.259 55.297 3 7.2027E-31 16345 20230619_1883_Aki_TMTPro18x_K_F4 216.49 4.1433 148270 126950 143360 155120 111550 152560 163960 152440 159290 184010 175530 173230 201400 167340 177620 200590 189220 203140 137100 116450 145680 154320 119980 154400 162160 156640 163310 183910 180470 176170 203570 174620 181810 201120 181030 192860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 117140000 29973 1427 28154 56272;56273 45442;45443 45442 2 9606 Homo sapiens -0.04675433437660104 VTGEVHIGGVMLK Unmodified 1338.733 0.73295662 385 Q96AC1-3;A0A024R687;Q96AC1;Q96AC1-2;A8K6S3;G3V281;G3V379 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 1 0 1 52.465 52.465 3 0.0013098 15364 20230619_1880_Aki_TMTPro18x_K_F1 89.43 67.232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29974 385 28155 56274 45444 45444 1 9606 Homo sapiens 0.07713946305352692 VTGGYPFEAYK Unmodified 1230.5921 0.59208927 1889 A1LT96;A0AVT1;B3KSS1;A0AVT1-2 UBA6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 0 8 0 1 55.956 56.018 2 9.3759E-05 16147 20230619_1888_Aki_TMTPro18x_K_F8 143.89 109.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29975 1889 28156 56275 45445 45445 1 9606 Homo sapiens -0.01398309076444093 VTGPPPGTPQPR Unmodified 1202.6408 0.6407708 2547 F5GYK2;B4DMU7;Q59GV6;Q9NRL3;Q9NRL3-3;R4GN16;M0QZM0 STRN4 Striatin-4 yes no 0 0 0 8 0 1 38.477 38.463 2 9.5145E-05 8862 20230619_1888_Aki_TMTPro18x_K_F8 147.75 106.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29976 2547 28157 56276 45446 45446 1 9606 Homo sapiens 0.04755604283309367 VTGPQATTGTPLVTMRPASQAGK Unmodified 2268.1896 0.18961504 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4;Q05C05 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 1 5 0 1 47.688 47.764 3 1.1447E-13 12797 20230619_1885_Aki_TMTPro18x_K_F5 141.1 124.92 27784 21461 21213 23670 25816 28858 24015 26123 25266 28027 24156 22641 30004 21447 23704 25210 26262 24602 25632 19674 22177 23795 26423 28730 24365 26914 25662 28054 25079 23187 30110 22387 24362 25237 25091 23380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21072000 29977 1331 28158 56277 45447 45447 1 9606 Homo sapiens 0.10624782157947266 VTGSLETK Unmodified 833.44945 0.44944778 1286 A0A1L1UHR1;P21796;B3KTS5;C9JI87 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 0 6 0 1 42.8 42.894 2 0.00040415 10736 20230619_1886_Aki_TMTPro18x_K_F6 164.77 107.3 164690 90454 260220 250710 410970 430390 309060 429200 352520 196990 355320 414310 303920 319200 362760 134540 334630 325320 152710 84180 258590 242080 411810 421120 319170 431880 356110 218220 362710 407170 314930 322460 364990 149690 320380 307000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117810000 29978 1286 28159 56278 45448 45448 1 9606 Homo sapiens 0.0260610325219659 VTGTLDANR Unmodified 945.48796 0.48795855 1426 A0A384MEG1;Q16658;B3KTA3;B3KTM9;C9JFC0;A0A0A0MSB2 FSCN1 Fascin yes no 0 0 0 4.5 0.5 1 1 37.543 37.611 2 7.331E-06 8566 20230619_1883_Aki_TMTPro18x_K_F4 179.17 135.37 172610 91595 208590 204870 262640 291250 201340 293070 263420 131790 196200 225340 162050 169120 194500 104230 259820 153820 159530 84893 209660 198540 266910 287690 208730 294660 261690 144800 203230 222500 168350 172710 200250 108930 247230 145960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 583340000 29979 1426 28160 56279;56280 45449 45449 1 9606 Homo sapiens 0.01303408886701618 VTGTLETK Unmodified 847.4651 0.46509784 62 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;P45880-2;P45880-1;B4DKM5;Q5JSD2;Q5JSD1;A2A3S1 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 6 0.816 1 1 1 43.472 43.558 2 1.0764E-05 11043 20230619_1885_Aki_TMTPro18x_K_F5 147.19 76.917 275900 144510 391760 424080 608060 647570 455710 610770 456250 284300 529380 634740 452980 478230 507300 152000 522150 458670 255430 134700 391740 407580 609810 636310 468830 617320 466890 315500 537250 622440 467830 480950 513660 176500 499010 432630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163910000 29980 62 28161 56281;56282;56283 45450;45451 45450 2 9606 Homo sapiens 0.03526389769228899 VTGWGNRR Unmodified 944.49405 0.49404698 2771 CON__P00735 yes yes 0 0 1 5.5 0.5 1 1 33.186 33.248 3 0.0089814 6990 20230619_1886_Aki_TMTPro18x_K_F6 70.69 35.882 + 28781 29654 38056 36456 79439 90007 53702 56337 108810 37594 53302 47172 35712 30830 114730 24658 50563 31912 26727 27185 38508 36925 78660 86152 57260 59324 105260 39470 56617 46901 40730 32014 111220 25583 48869 30302 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40580000 29981 2771 28162 56284;56285 45452 45452 1 9606 Homo sapiens 0.019579719088937964 VTHAVVTVPAYFNDAQR Unmodified 1886.9639 0.96389585 3429 V9HWB4;P11021;A0A7P0TB36;A0A7P0TAI0;B4DEF7 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 0 1.5 0.5 1 1 50.559 50.585 3 6.225199999999999E-19 14568 20230619_1880_Aki_TMTPro18x_K_F1 189.32 172.44 89516 103540 128310 110220 123130 120190 135560 119530 105300 116380 126890 97182 110690 84156 193350 117370 128690 113470 83283 94759 126920 110990 128290 120860 135070 122110 109890 117150 128470 99224 117270 89062 191160 117430 123650 107880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 584620000 29982 3429 28163 56286;56287 45453;45454 45453 2 9606 Homo sapiens 0.05589245820897304 VTHELQAMK Oxidation (M) 1071.5383 0.53827956 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PKD5;E9PMD8;E9PN50;E9PLG2 PSMC3 26S protease regulatory subunit 6A yes no 0 1 0 6.5 0.5 1 1 37.132 37.198 3 0.0014386 8396 20230619_1886_Aki_TMTPro18x_K_F6 91.265 64.15 44647 26809 38983 45491 65126 68376 63369 60206 78090 37326 35618 33177 37834 31678 40591 34649 44099 35935 41172 24723 40513 44661 65534 67183 64374 61445 76913 38912 38638 33842 38699 32894 41383 34867 42103 34147 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49365000 29983 4761 28164 56288;56289 45455 45455 2907 1 9606 Homo sapiens 0.00537195220204012 VTHELQAMK Unmodified 1055.5434 0.54336494 4761 R4GNH3;A8K781;A0A140VK42;P17980;E9PKD5;E9PMD8;E9PN50;E9PLG2 PSMC3 26S protease regulatory subunit 6A yes no 0 0 0 7 0 1 43.046 43.125 3 0.0001667 10533 20230619_1887_Aki_TMTPro18x_K_F7 130.41 93.719 135170 76813 134040 130830 152880 173860 150150 145750 215030 95370 121230 107150 112650 94178 123480 121820 127980 99897 124740 70859 136520 128160 157400 171780 153470 149500 211210 99718 128340 107970 115800 98994 125600 120770 122210 95218 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 220300000 29984 4761 28164 56290 45456 45456 1 9606 Homo sapiens 0.017814990828355803 VTHTGQVYDDK Unmodified 1261.5939 0.59388018 3301 O75380;Q6IBC4;D6RBT3 NDUFS6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial yes no 0 0 0 3.5 0.5 1 1 36.568 36.618 3 4.4836E-07 8208 20230619_1882_Aki_TMTPro18x_K_F3 166.45 110.09 24299 16655 30741 34089 45709 47569 40223 39152 52394 33052 44398 40758 43087 34280 34902 24065 46553 38426 22496 15393 30939 33125 46124 46857 41231 40416 52296 34011 45832 40797 43621 35065 36210 25194 44372 36375 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166080000 29985 3301 28165 56291;56292 45457 45457 1 9606 Homo sapiens -0.026453000584751862 VTHVEPWEK Unmodified 1123.5662 0.56620887 4075 Q5VTL8;Q5VTL8-2 PRPF38B Pre-mRNA-splicing factor 38B yes no 0 0 0 5 0.816 1 1 1 44.295 44.367 3 0.00017905 11351 20230619_1885_Aki_TMTPro18x_K_F5 128.86 96.107 133220 89136 129360 133650 127200 142780 167040 129870 167770 147180 160230 135010 166020 148210 134860 167620 167200 166160 123020 82025 131760 131390 133340 143340 166030 134140 170480 147560 164820 138200 167860 153460 139650 167960 159650 157840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 298570000 29986 4075 28166 56293;56294;56295 45458;45459 45459 2 9606 Homo sapiens 0.009368414719347129 VTIAQGGVLPNIQAVLLPK Unmodified 1930.1615 0.16153303 74 Q99878;A4FTV9;A0A0U1RR32;A0A024R017;Q08AJ9;B2R5B3;A0A024RAS2;A3KPC7;A0A0U1RRH7;Q16777;P04908;Q9BTM1;P20671;P0C0S8;Q6FI13;Q7L7L0;Q93077;Q96KK5;B4E0B3;H0YFX9 HIST1H2AJ;HIST1H2AK;HIST1H2AC;HIST1H2AB;H2AFJ;HIST1H2AH;HIST2H2AC;HIST1H2AD;HIST1H2AG;HIST2H2AA3;HIST3H2A Histone H2A type 1-J;Histone H2A;Histone H2A type 2-C;Histone H2A type 1-B/E;Histone H2A.J;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 2-A;Histone H2A type 3;Histone H2A type 1-C;Histone H2A type 1-H yes no 0 0 0 5.88 0.525 5 17 2 73.956 74.012 3;4 2.1233E-15 20136 20230619_1886_Aki_TMTPro18x_K_F6 168.32 149.08 9100200 7437000 7245700 8205500 6965500 8018300 8590100 8065500 8428400 8103900 8803900 9499500 9950100 8170900 8945500 8550700 8904200 10428000 8400500 6816000 7516900 8223500 7305700 8125400 8562300 8241800 8610000 8229900 9071200 9532200 10068000 8496000 9109800 8693400 8530400 9879000 23 21 23 22 21 23 23 23 22 23 22 21 23 22 23 23 22 23 185570000000 29987 74 28167 56296;56297;56298;56299;56300;56301;56302;56303;56304;56305;56306;56307;56308;56309;56310;56311;56312;56313;56314;56315;56316;56317;56318;56319 45460;45461;45462;45463;45464;45465;45466;45467;45468;45469;45470;45471;45472;45473;45474;45475;45476;45477;45478;45479;45480;45481;45482;45483;45484;45485;45486 45462 27 9606 Homo sapiens 0.23365872030854007 VTIEYYSQLK Unmodified 1242.6496 0.64960415 2459 B4DE91;P49189;B4DX14;P49189-3;P49189-2 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 8 0 1 57.097 57.149 3 0.0026818 16654 20230619_1888_Aki_TMTPro18x_K_F8 64.103 45.358 55421 51679 53772 60426 65848 69765 67223 66171 82274 70083 68937 67735 77424 61679 72335 75395 68743 73600 51278 47368 54984 60429 67476 69772 68145 67949 82424 70579 71726 68678 78477 64572 73465 75439 65841 69907 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10045000 29988 2459 28168 56320 45487 45487 1 9606 Homo sapiens 0.037985331291110924 VTILCDK Unmodified 847.44734 0.44733929 4183 Q86U42-2;Q86U42;Q92843-2;A0A7I2V383;B4DEH8;G3V4T2;B6RF28;A6NDY0-2;A6NDY0;A6NDY0-4 PABPN1;PABPN1L Polyadenylate-binding protein 2;Embryonic polyadenylate-binding protein 2 yes no 0 0 0 7 0.816 1 1 1 50.698 50.777 2 0.017133 13831 20230619_1888_Aki_TMTPro18x_K_F8 109.01 41.978 616160 520110 571260 625950 642280 726230 699990 654080 777450 702000 714430 667800 775970 625190 648930 832540 893300 787810 569520 477020 585510 624730 663330 725110 704670 674570 785090 706130 738280 678540 784060 657430 676550 830210 851610 749130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 896910000 29989 4183 28169 56321;56322;56323 45488;45489 45489 2 9606 Homo sapiens 0.01751351242739929 VTILGHVQR Unmodified 1021.6033 0.60326308 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;V9GY25 PFKP ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 4 0 1 40.589 40.632 3 4.6768E-07 9806 20230619_1883_Aki_TMTPro18x_K_F4 131.41 94.962 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29990 1831 28170 56324 45490 45490 1 9606 Homo sapiens 0.09332557808374986 VTILLDQSPASK Unmodified 1270.7133 0.71326704 4821 yes yes 0 0 0 5.67 0.471 1 2 64.093 64.139 3 0.007443 19948 20230619_1886_Aki_TMTPro18x_K_F6 69.01 40.836 + 207160 161900 181670 206890 158710 192100 223660 237560 236610 147440 117330 111170 149300 104580 136620 166610 127850 123380 191310 148620 186520 205080 168580 196330 222110 237110 235330 152810 127400 114450 150660 111450 138830 163920 122380 117660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181860000 29991 4821 28171 56325;56326;56327 45491 45491 1 9606 Homo sapiens 0.08873893566214974 VTIMGIYSIK Unmodified 1123.6311 0.63111731 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0;B4DVK5;B1AHB2 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 5 0 1 62.422 62.469 2 0.0048339 18996 20230619_1885_Aki_TMTPro18x_K_F5 103.55 52.58 554610 424540 504000 504810 393110 555640 538320 542370 642990 620020 529560 528100 590120 507830 546340 615340 587150 627740 512240 389460 514690 504020 422210 557440 537670 556980 644760 619760 551350 539550 598410 530330 558970 617130 561670 595950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193610000 29992 2188 28172 56328 45492 45492 1 9606 Homo sapiens 0.0742469995357169 VTKPNIPEAIR Unmodified 1236.719 0.71902112 1421 E5RHW4;A0A384ME54;O94905;E5RJ09 ERLIN2 Erlin-2 yes no 0 0 1 1.5 0.5 1 1 46.261 46.301 3 0.08218 12721 20230619_1881_Aki_TMTPro18x_K_F2 43.337 21.64 367090 308810 347420 377610 363480 401880 419290 443430 532150 380280 434330 456430 477690 373620 439140 446100 457160 385560 339350 283270 355020 376090 377980 405470 422980 448410 531290 390220 452280 457190 484150 391930 448230 443800 436740 367110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 315040000 29993 1421 28173 56329;56330 45493 45493 1 9606 Homo sapiens 0.11013036868553172 VTLATLK Unmodified 744.47454 0.47454032 1089;2882 P06748;A0A7I2V5S2;A0A0S2Z491;P06748-3;A0A7I2YQC0;A4ZU86;A0A140VJQ2;P06748-2;A0A0S2Z4G7;Q9BTI9;A0A7I2V3U2;A0A7I2V2X9;A0A7I2V433;A0A7I2V4G8;A0A7I2V3G5;A0A7I2V579;A0A024RAP1;V9HVU7;E5RI98;A0A7I2V5J8 NPM1;CLEC2D Nucleophosmin no no 0 0 0 2.5 0.5 1 1 52.463 52.509 2 0.0030674 15529 20230619_1881_Aki_TMTPro18x_K_F2 157.52 9.4481 2986900 2710600 2204300 1832800 4448200 9186600 374210 2874300 6731700 11337 0 112360 137240 109380 506380 126160 163530 118630 2757800 2474700 2337900 2016300 4386800 8575700 811550 3283300 6206200 186790 191480 111120 152320 113730 487320 127320 159460 112920 2 2 2 2 2 2 2 2 2 1 0 2 2 2 2 2 2 2 5321600000 29994 1089;2882 28174 56331;56332 45494;45495 45494 2 9606 Homo sapiens 0.09208202845422875 VTLAVSDLQK Unmodified 1072.6128 0.61282471 2121 B4DX01;A8K8F0;Q9HC38-2;Q9Y3E8;Q9HC38;I3L3Q4;B3KV49;B7Z403;Q9HC38-3 GLOD4 Glyoxalase domain-containing protein 4 yes no 0 0 0 7.5 0.5 1 1 55.022 55.086 3 0.00011968 15782 20230619_1888_Aki_TMTPro18x_K_F8 126.39 95.775 49664 42765 52769 52323 44837 54008 50764 51246 61746 51813 50231 52921 51654 46192 57612 56918 51898 56661 45962 39225 53226 52087 47402 54414 51197 52568 61803 52388 52180 53446 52971 48428 58162 57016 49744 53802 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 242470000 29995 2121 28175 56333;56334 45496 45496 1 9606 Homo sapiens 0.07942281303235177 VTLDWAK Unmodified 831.44905 0.44905385 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;B3KTP9;A0A7I2V699;Q9BQ02;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 0 4.2 2.79 1 1 1 1 1 56.288 56.321 2 0.0050435 16936 20230619_1880_Aki_TMTPro18x_K_F1 155.53 68.696 1882200 1482600 1470100 1627500 1473400 2231100 1232600 3183700 981200 1380400 1322000 760270 1227600 834470 1543200 1058500 962590 460700 1736900 1359000 1528800 1641200 1529100 2229700 1255400 3130600 1029800 1468800 1333400 805880 1268400 870770 1528800 1028600 923140 445750 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2494900000 29996 1658 28176 56335;56336;56337;56338;56339 45497;45498;45499 45497 3 9606 Homo sapiens 0.026587283229901004 VTLEVGK Unmodified 744.43815 0.43815481 3287 O60869-2;O60869-3;O60869 EDF1 Endothelial differentiation-related factor 1 yes no 0 0 0 8 0 1 48.593 48.66 2 0.023523 12957 20230619_1888_Aki_TMTPro18x_K_F8 100.45 13.979 79689 53905 75458 79995 80991 87320 80922 75169 103070 80367 92783 86759 86373 71788 81965 85196 101630 81401 73574 49596 77108 78700 83716 87444 82273 77806 103250 81197 95351 87306 88161 75250 84518 85188 96905 77430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34028000 29997 3287 28177 56340 45500 45500 1 9606 Homo sapiens 0.05571325948722006 VTLEYRPVIDK Unmodified 1331.7449 0.74490152 21 A0A024QZ30;P31040;P31040-2;D6RFM5;B3KT34;P31040-3;B3KYA5 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 1 4.5 3.5 1 1 51.029 51.029 3 0.0010576 14742 20230619_1880_Aki_TMTPro18x_K_F1 92.99 61.763 230920 187230 215160 260690 247630 273880 262180 252180 263170 283420 278320 264850 312600 251450 272520 325660 287770 294320 213390 172000 220650 257270 255020 275400 263540 260020 268860 284180 286260 269400 315940 263790 278970 324170 275230 279850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166460000 29998 21 28178 56341;56342 45501;45502 45501 2 9606 Homo sapiens 0.0922988632016768 VTLGTQPTVLR Unmodified 1183.6925 0.69247202 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;B4DZP5 DDB1 DNA damage-binding protein 1 yes no 0 0 0 3 0 1 48.883 48.961 2 4.7428E-09 13661 20230619_1882_Aki_TMTPro18x_K_F3 189.18 136.54 220460 198770 217580 219630 199060 228550 220140 216800 243500 267810 256350 224210 268320 212510 249770 288610 253620 277340 203960 182120 220990 220300 208880 230230 221560 223660 247430 266570 262730 229350 272460 223740 254750 288040 242790 263450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 801860000 29999 1710 28179 56343 45503 45503 1 9606 Homo sapiens 0.10797347977222671 VTLLDLMIAK Unmodified 1115.6624 0.66241744 4650 Q9UBB4;A0A1W2PQD2;Q9UBB4-2;Q7Z524 ATXN10 Ataxin-10 yes no 0 0 0 3.5 0.5 1 1 65.222 65.244 3 0.001797 20650 20230619_1882_Aki_TMTPro18x_K_F3 87.149 56.599 28308 23201 21668 23359 18866 22792 23460 21946 26017 23457 24970 28883 27454 22487 30982 26883 24545 25802 26125 21247 22533 23584 19976 23081 23469 22533 26311 23793 25817 28846 28094 23635 31065 26901 23555 24514 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27257000 30000 4650 28180 56344;56345 45504;45505 45504 2 9606 Homo sapiens 0.1092127298768446 VTLLEGDHVR Unmodified 1137.6142 0.6142217 88 O75534-4;O75534;A0A024R0E2;Q9GZV0;O75534-3;O75534-2;A0A8I5KV85;A0A024R0K2;A0A8I5KPJ6;A0A8I5KW72;A0A8I5QKX0;A0A8I5KXH5;A0A8I5KPC0;Q96L66;A0A8I5QJA6;A0A8I5KTQ3;E9PLT0;E9PNG3;A0A8I5KXL1;A0A8I5KYL8;A0A8I5KWW0;A0A8I5KPQ8;A0A8I5KS07;A0A8I5KW29 CSDE1;UNR Cold shock domain-containing protein E1 yes no 0 0 0 4 0.816 1 1 1 43.355 43.419 3 3.02E-14 11061 20230619_1883_Aki_TMTPro18x_K_F4 201.61 141.02 162100 147310 154610 152160 155870 179670 174320 169870 230310 191800 196370 189250 234400 179890 152250 220780 213360 210680 149930 134880 157700 153720 162460 179420 176400 174790 230030 192710 204570 192000 234050 188120 160010 220440 203530 200220 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 697250000 30001 88 28181 56346;56347;56348 45506;45507;45508 45508 3 9606 Homo sapiens 0.050919153919721793 VTLLETEMLLSK Oxidation (M) 1391.7582 0.75816832 4484 Q9C0F1;Q9C0F1-2 CEP44 Centrosomal protein of 44 kDa yes no 0 1 0 7 0 1 63.044 63.076 3 0.0056095 19214 20230619_1887_Aki_TMTPro18x_K_F7 69.864 49.437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30002 4484 28182 56349 45509 45509 2786 1 9606 Homo sapiens 0.07795956317249875 VTLLHHVLEEAEK Unmodified 1516.8249 0.82494275 1616 Q27J81;Q27J81-2;A0A6Q8PHA2;A0A6Q8PH71;A0A6Q8PHG2;A0A6Q8PGN3;A0A6Q8PF44;A0A6Q8PH25;A0A6Q8PF29;A0A087X118;A0A6Q8PFW4;A0A6Q8PGC7;A0A0A0MQU1;A0A6Q8PHS8;A0A6Q8PH63 INF2 Inverted formin-2 yes no 0 0 0 6 0 1 55.27 55.346 3 0.0007856 16165 20230619_1886_Aki_TMTPro18x_K_F6 97.716 78.888 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30003 1616 28183 56350 45510 45510 1 9606 Homo sapiens 0.08720327923379045 VTLMQLPTR Unmodified 1057.5954 0.59540051 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;B4DXN6;Q59FS8 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 4 0 1 54.07 54.085 2 0.0062922 15815 20230619_1883_Aki_TMTPro18x_K_F4 91.867 58.604 235120 202420 205180 213360 208610 282310 230790 224940 278160 111460 101080 81443 93518 76575 157340 117370 107460 68145 217250 185410 211090 215520 217570 278830 232760 230740 273100 118190 111730 84092 98754 81266 155890 114690 103030 65391 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168710000 30004 487 28184 56351 45511 45511 1 9606 Homo sapiens 0.06890662496562072 VTLNPPGTFLEGVAK Unmodified 1541.8453 0.84534384 3161 K7EQ77;K7EK78;K7EP35;K7EMT4;Q86Y39;Q86Y39-2 NDUFA11 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 yes no 0 0 0 2 0 1 62.035 62.045 3 5.6517E-06 19510 20230619_1881_Aki_TMTPro18x_K_F2 121.39 96.539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30005 3161 28185 56352 45512 45512 1 9606 Homo sapiens 0.09609498583176901 VTLPDGK Unmodified 728.40685 0.40685468 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;D6R9F8;D6RDJ6;D6RCA5;D6RBR8 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 46.897 46.982 2 0.023523 12594 20230619_1886_Aki_TMTPro18x_K_F6 100.45 16.837 588370 415300 521030 546820 590810 666930 584940 587020 800710 698160 811240 847900 807780 662710 687780 670040 879160 834040 543060 381520 536080 542890 608680 663360 596810 608200 803540 704430 831710 847250 818800 690370 711900 682520 839010 790600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 327320000 30006 2326 28186 56353;56354 45513;45514 45513 2 9606 Homo sapiens 0.03178752914618599 VTLTSEEEAR Unmodified 1133.5564 0.55643205 3370 V9HWB9;P00338;P00338-3;B4DJI1;P00338-4 HEL-S-133P;LDHA L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 1.5 0.5 1 1 39.912 39.947 2 4.3251E-35 10053 20230619_1880_Aki_TMTPro18x_K_F1 306.6 249.55 214090 159770 173770 203990 212810 249800 212790 223500 320750 266160 292860 305560 294840 253240 256500 302990 331270 307630 197540 146690 180660 202910 218390 248460 217840 231240 319360 268050 301880 306620 299140 265550 265870 303820 316070 292230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 188440000 30007 3370 28187 56355;56356 45515;45516 45515 2 9606 Homo sapiens -0.0050039132411257015 VTLVFEHVDQDLR Unmodified 1569.8151 0.81510635 660 F8VYH9;F8VTV8;F8VWX7;A0A024RBB6;P11802;F8VXD2;F8VZZ0;F8VZ51;Q6LC83;F8W1L8 CDK4 Cyclin-dependent kinase 4 yes no 0 0 0 4.5 0.5 1 1 58.133 58.163 3 5.3575E-11 17135 20230619_1885_Aki_TMTPro18x_K_F5 146.84 119.18 203100 168620 202670 200200 204510 260680 223870 229620 281350 239870 249730 274550 247990 227370 260520 266730 246490 281630 187810 154630 205980 200410 213160 258220 226400 236950 282000 243020 257860 275480 253850 238100 263970 268240 236220 267210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 212780000 30008 660 28188 56357;56358 45517;45518;45519 45519 3 9606 Homo sapiens 0.05299139917997309 VTMEEASR Unmodified 921.42258 0.4225811 2732 C9J050;C9JEJ2;P49585;D3DXB2;B2R8P1;C9J2E1;C9JPY0;C9JVS0;F8WAZ5 PCYT1A;hCG_2002711 Choline-phosphate cytidylyltransferase A yes no 0 0 0 2 0 1 35.894 35.95 2 0.0038014 8064 20230619_1881_Aki_TMTPro18x_K_F2 118.32 88.908 30753 19524 33925 35369 55578 55720 42756 53456 58267 38771 52551 55762 50795 42660 48245 31212 61716 56198 28421 18016 34526 34656 55646 54723 44344 54325 58187 40511 54127 55361 51786 43863 49744 33007 58881 53133 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24810000 30009 2732 28189 56359 45520 45520 1 9606 Homo sapiens -0.04127328630647753 VTMINAIPVASLDPIK Unmodified 1680.9484 0.94842871 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 2.5 0.5 1 1 63.791 63.811 3 0.00035018 20050 20230619_1882_Aki_TMTPro18x_K_F3 84.14 62.91 67751 53286 54934 67611 55126 65866 67199 66991 75150 86704 86214 90758 79903 77927 96824 88119 83604 103280 62534 48910 56958 67066 57644 66752 67310 68898 76595 86666 87733 91478 82600 81327 97391 89266 80256 97864 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 137160000 30010 4746 28190 56360;56361 45521;45522 45522 2 9606 Homo sapiens 0.13519242979464252 VTMLFLGLHNVR Unmodified 1398.7806 0.78057552 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60;H7BZ35 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 8 0 1 61.025 61.057 3 4.3132E-10 18198 20230619_1888_Aki_TMTPro18x_K_F8 155.97 122.71 37989 32325 36272 33750 29925 36332 33695 31342 53152 28441 27326 24971 29558 27569 41711 30315 26031 30243 35123 29607 36878 34023 31756 36437 34344 32300 51938 28863 29358 25613 30687 28493 41274 30456 25087 28711 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122720000 30011 1207 28191 56362 45523 45523 1 9606 Homo sapiens 0.09713645296164941 VTMQNLNDR Oxidation (M) 1105.5186 0.51860675 1272;2775 P13645;CON__P13645;A0A1B0GVI3;CON__P02535-1;Q7Z3Y7;CON__Q7Z3Y7;CON__Q148H6;CON__Q9Z2K1;CON__Q3ZAW8;CON__P08779;CON__Q7Z3Y8;CON__A2A4G1;CON__Q7Z3Z0;Q7Z3Z0;P08779;Q7Z3Y8;CON__Q7Z3Y9;Q7Z3Y9;Q6ZPD6;CON__P02533;P02533 KRT10;KRT28;KRT25;KRT16;KRT27;KRT26;KRT14 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 27;Keratin, type I cytoskeletal 26;Keratin, type I cytoskeletal 14 no no 0 1 0 3.5 0.5 1 1 33.962 34.021 2 0.0024623 7115 20230619_1883_Aki_TMTPro18x_K_F4 99.013 67.709 + 7229.2 9276.1 8966.7 33072 1015900 31230 14574 27599 66805 7639.8 10559 13137 14123 150750 23990 6799.7 11895 15040 6721.7 8660.4 22540 31315 940280 34683 74189 27901 64214 9289 13664 17724 15726 142730 23457 9784.8 11520 14187 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85239000 30012 1272;2775 28192 56363;56364 45524;45525 45525 804 2 9606 Homo sapiens -0.029931807905541064 VTMQNLNDR Unmodified 1089.5237 0.52369213 1272;2775 P13645;CON__P13645;A0A1B0GVI3;CON__P02535-1;Q7Z3Y7;CON__Q7Z3Y7;CON__Q148H6;CON__Q9Z2K1;CON__Q3ZAW8;CON__P08779;CON__Q7Z3Y8;CON__A2A4G1;CON__Q7Z3Z0;Q7Z3Z0;P08779;Q7Z3Y8;CON__Q7Z3Y9;Q7Z3Y9;Q6ZPD6;CON__P02533;P02533 KRT10;KRT28;KRT25;KRT16;KRT27;KRT26;KRT14 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 27;Keratin, type I cytoskeletal 26;Keratin, type I cytoskeletal 14 no no 0 0 0 5 0 1 41.017 41.105 2 0.00064088 9980 20230619_1885_Aki_TMTPro18x_K_F5 128.6 48.164 + 40510 34812 40113 58525 554950 74051 99426 67355 98403 48164 60634 66668 59180 159770 66699 60687 72330 69633 37468 32050 47846 57284 519210 75033 126370 68860 99347 50525 64016 69989 61574 155990 67966 63192 69131 66053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72404000 30013 1272;2775 28192 56365 45526 45526 1 9606 Homo sapiens -0.017488769279452754 VTNEFVHINNLK Unmodified 1426.7569 0.75686319 494 A0A024R861;O00743-2;O00743;O00743-3;B7Z3E2 PPP6C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 0 1 0 1 51.716 51.716 3 1.0586E-09 15057 20230619_1880_Aki_TMTPro18x_K_F1 172.92 123.5 256770 234150 267780 278850 222890 288510 265200 273720 274650 353990 348880 355710 369410 307470 323510 416640 365270 421280 237680 214670 270540 278100 236470 290620 265450 282800 282590 353330 355400 359450 374140 324580 332620 416880 349470 399880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 273970000 30014 494 28193 56366 45527 45527 1 9606 Homo sapiens 0.06055503063385004 VTNGAFTGEISPGMIK Unmodified 1620.8181 0.81814282 3674 V9HWK1;P60174;P60174-3;B4DUI5;Q53HE2;Q2QD09 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 8 0 1 58.73 58.772 3 2.1906E-14 17290 20230619_1888_Aki_TMTPro18x_K_F8 171.46 150.8 112150 84447 105460 119440 82750 106930 128330 110430 98822 162210 160560 158540 176410 134510 160080 166150 144470 176810 103600 77617 107470 117550 89006 109100 125870 114030 105040 160900 162540 160270 178590 141320 162250 167040 138600 167700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 439120000 30015 3674 28194 56367 45528;45529 45529 2 9606 Homo sapiens 0.03256646980480582 VTNLLMLK Unmodified 930.55722 0.55722409 1159;1980 P26599;P26599-2;A0A0U1RRM4;P26599-1;A0A7I2V621;A0A7I2V4H6;A0A6Q8PEX4;Q59H49;K7EKJ7;O95758-6;O95758-2;O95758;O95758-5;A0A024R163;O95758-4;O95758-1;K7ELW5;X6R242;A6NLN1;K7ES59 PTBP1;PTBP3;ROD1 Polypyrimidine tract-binding protein 1;Polypyrimidine tract-binding protein 3 no no 0 0 0 4.5 0.5 1 1 62.047 62.073 2 0.010019 18836 20230619_1885_Aki_TMTPro18x_K_F5 108.74 0 1345500 1158600 1185900 1114700 1399500 2078700 1388700 1437200 2055500 655240 574810 436160 651170 543720 840170 689410 455070 342030 1243300 1060400 1221400 1142300 1442500 2013000 1420200 1490700 1993000 701100 662260 457840 671410 564690 828920 671730 438350 328950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 625950000 30016 1159;1980 28195 56368;56369 45530;45531 45531 2 9606 Homo sapiens 0.08916776581907015 VTNLSEDTR Unmodified 1033.504 0.50400254 3162;3172 K7EL20;O75821;Q6IAM0;A8K5K5;K7ENA8;K7ER90 EIF3G Eukaryotic translation initiation factor 3 subunit G no no 0 0 0 2.5 0.5 1 1 38.419 38.477 2 3.6174E-09 9082 20230619_1881_Aki_TMTPro18x_K_F2 217.2 118.3 240730 119930 263860 282680 334880 395310 294530 334140 382680 280590 397640 422110 403320 329980 346700 196230 425910 391270 222230 111300 267320 273190 341430 389350 302160 344040 385020 290930 407600 418590 408670 336620 357020 210820 406500 369690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 390300000 30017 3162;3172 28196 56370;56371 45532;45533 45532 2 9606 Homo sapiens -0.011409296670535696 VTPDIEESLLEPENEK Unmodified 1840.8942 0.89420411 3876 Q14151;A0PJ47 SAFB2 Scaffold attachment factor B2 yes no 0 0 0 1.5 0.5 1 1 61.396 61.402 3 0.0041415 19246 20230619_1881_Aki_TMTPro18x_K_F2 69.331 53.695 71795 64008 66667 71215 70506 81511 72568 74782 85142 70088 72357 64403 74290 62865 83884 79240 76643 76215 66385 58650 68236 71479 73044 81496 73449 76729 85484 70951 74903 65649 76212 65771 84705 79214 73398 72423 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 368370000 30018 3876 28197 56372;56373 45534 45534 1 9606 Homo sapiens 0.007392775709604393 VTPDLKPTEASSSAFR Unmodified 1704.8683 0.86826413 250 A0A024R3K9;A0A024R3N2;Q6P4R8-3;Q6P4R8;Q6P4R8-2 NFRKB Nuclear factor related to kappa-B-binding protein yes no 0 0 1 8 0 1 47.9 47.958 3 3.3718E-08 12654 20230619_1888_Aki_TMTPro18x_K_F8 118.31 96.549 41495 38639 40686 49243 45527 47957 44275 45555 52386 55383 58820 52083 61197 47008 53830 64474 61000 56045 38397 35446 41516 48828 46866 48547 44982 46973 53191 55342 60099 52895 62000 49596 55321 64007 58261 53340 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32916000 30019 250 28198 56374 45535 45535 1 9606 Homo sapiens 0.044024729099874094 VTPDTDWAR Unmodified 1059.4985 0.49852324 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;K7ESG8 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 3.5 0.5 1 1 45.893 45.952 2 7.3719E-12 12122 20230619_1883_Aki_TMTPro18x_K_F4 225.99 193.77 1025200 885800 1006800 941320 782800 895130 892390 937670 950840 1192300 1258400 1143700 1274500 1034000 1082200 1214700 1290500 1209800 948140 811400 1020400 946250 834040 910090 896280 961740 978550 1189300 1276300 1159800 1290700 1080100 1116000 1217200 1232200 1149400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1100000000 30020 161 28199 56375;56376 45536;45537 45537 2 9606 Homo sapiens -0.028846084588622034 VTPEPGAGPTQGLLR Unmodified 1491.8045 0.80454166 459 A0A024R7K7;A0A024R7M6;Q86YP4-2;Q86YP4;Q86YP4-3;V9GYX5;C9JVY3;V9GY85;H7C3H1;C9JMI3;C9JGN4;C9JJK9 GATAD2A Transcriptional repressor p66-alpha yes no 0 0 0 7 0 1 49.286 49.37 2 9.3102E-06 13291 20230619_1887_Aki_TMTPro18x_K_F7 156.01 126.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30021 459 28200 56377 45538 45538 1 9606 Homo sapiens 0.0783115726358119 VTPGQLMSYIQLFK Unmodified 1623.8695 0.8694501 4275 Q8WU76-2;Q8WU76 SCFD2 Sec1 family domain-containing protein 2 yes no 0 0 0 7 0 1 66.28 66.305 3 9.8129E-07 20648 20230619_1887_Aki_TMTPro18x_K_F7 125.61 105.18 10682 8339.5 8810.5 10312 10202 9717.7 10423 8449.1 9198.1 13080 12924 11399 13982 13836 9177.9 13663 14198 13017 9860.6 7652.9 9133.4 10242 10481 9849.6 10458 8851.1 9608 12919 13116 11734 14024 14175 9718.4 13686 13527 12375 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11813000 30022 4275 28201 56378 45539 45539 1 9606 Homo sapiens 0.08247015745178032 VTPLGAGQDVGR Unmodified 1168.62 0.62003536 82 E9PMA2;H0YE15;E9PJG0;E9PKA4;E9PNS4;A0A087WXT8;C9J979;Q96HV7;A0A024R073;Q5TA45-2;Q5TA45-3;Q5TA45 CPSF3L Integrator complex subunit 11 yes no 0 0 0 5.5 0.5 1 1 43.089 43.176 2 1.4056E-06 10855 20230619_1886_Aki_TMTPro18x_K_F6 155.26 98.16 54448 41569 48078 58752 53308 62938 58246 56325 66846 65206 65109 61848 70023 64250 51489 77831 77432 65146 50277 38205 49519 57941 55146 63150 58701 58247 67558 65345 67054 63059 70491 66877 54257 77213 73751 62056 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54652000 30023 82 28202 56379;56380 45540 45540 1 9606 Homo sapiens 0.04247013903682273 VTPQREEGEVTVCFK Unmodified 1777.8669 0.86688392 1123 A0A0S2Z5B8;A0A0S2Z5D4;Q9UJW0;Q9UJW0-3;Q9UJW0-2;Q9NSJ5;B4DS07 DCTN4;DKFZp761J032 Dynactin subunit 4 yes no 0 0 1 5.5 0.5 1 1 47.433 47.512 3 1.7743E-07 12821 20230619_1886_Aki_TMTPro18x_K_F6 105.39 85.836 75414 67703 73995 79187 71253 79669 84819 77336 76535 94333 101000 97615 97939 81701 85401 106030 103510 116000 69765 62062 75281 79048 74562 80490 84501 79657 79476 94480 102310 98434 99451 86116 88182 106640 98949 110020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 173710000 30024 1123 28203 56381;56382 45541 45541 1 9606 Homo sapiens 0.009065155495363797 VTPRPQQTSASSPSSVNSR Unmodified 1984.9926 0.9926298 4683 Q9ULD2-2;Q9ULD2;H0YC63;Q9ULD2-5 MTUS1 Microtubule-associated tumor suppressor 1 yes no 0 0 1 2.5 0.5 1 1 31.378 31.452 3 1.775E-10 6160 20230619_1882_Aki_TMTPro18x_K_F3 137.69 117.58 17167 13685 15341 16607 16147 16250 13360 12748 19243 16723 27990 27957 16428 19408 22253 23959 25577 26212 15857 12555 15749 16525 16639 16388 13827 13388 19583 17035 27802 27592 17448 20509 22721 24125 24444 24870 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 26579000 30025 4683 28204 56383;56384 45542;45543;45544 45544 3 9606 Homo sapiens 0.039533186593871505 VTPSTVLLQVLEDTCR Unmodified 1829.9557 0.95569893 4476 Q9BZE9;Q9BZE9-2;J3QRW3;J3KRG1;C9JAL9;J3QR50 ASPSCR1 Tether containing UBX domain for GLUT4 yes no 0 0 0 8 0 1 65.564 65.583 3 4.9924E-15 20177 20230619_1888_Aki_TMTPro18x_K_F8 189.1 155.41 9086 5620.2 4869.3 8182.7 8197.4 6405.7 7776.6 9251.2 8329.5 8649.7 10840 12868 11736 11166 9375.3 10408 9911 10373 8356.5 5172 5363.8 8025.5 8230 6681.8 7884.4 9238.2 8555.7 8896.3 11054 12808 11843 11524 9610.3 10470 9480.8 9851.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51867000 30026 4476 28205 56385 45545 45545 1 9606 Homo sapiens 0.07391930789208345 VTQAIQSFCLEK Unmodified 1422.7177 0.71770049 229 A0A024R395;P49959;F8W7U8;P49959-3;P49959-2;Q05D78 MRE11A Double-strand break repair protein MRE11A yes no 0 0 0 2 0 1 60.619 60.631 2 0.042888 18869 20230619_1881_Aki_TMTPro18x_K_F2 72.2 54.336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30027 229 28206 56386 45546 45546 1 9606 Homo sapiens 0.023250347174780472 VTQDATPGSALDK Unmodified 1301.6463 0.64630969 79 Q8N995;A0A024R059;Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes no 0 0 0 4.2 0.748 1 2 2 45.734 45.795 2;3 0.0003988 12076 20230619_1883_Aki_TMTPro18x_K_F4 123.26 78.095 142860 93714 130580 133770 75751 79805 101090 96851 131690 141930 121750 82522 145810 97927 76936 201240 149000 101880 131840 86196 132830 131100 83759 85202 101490 99045 132130 139230 126060 87307 144700 105980 84102 194610 141540 97990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 442460000 30028 79 28207 56387;56388;56389;56390;56391 45547;45548;45549 45547 3 9606 Homo sapiens 0.007552382844778549 VTQDELK Unmodified 831.4338 0.43379771 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;B3KTP9;A0A7I2V349;A0A7I2V506;B3KM80;Q6ZS99 NCL Nucleolin yes no 0 0 0 3 0.816 1 1 1 42.708 42.772 2 0.0070017 11092 20230619_1881_Aki_TMTPro18x_K_F2 128.61 42.135 109830 65600 138400 144060 176210 199250 148850 177600 168600 118540 181590 215890 168700 163620 188930 82186 222700 194590 101600 60742 138820 139600 179290 196600 152390 181300 170930 125970 185430 212730 173700 166200 193000 90571 212550 183730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 940210000 30029 1658 28208 56392;56393;56394 45550 45550 1 9606 Homo sapiens 0.011338167351368611 VTQEEIK Unmodified 845.44945 0.44944778 1418 A0A384ME24;O00422;O00422-2;U3KQ12 SAP18 Histone deacetylase complex subunit SAP18 yes no 0 0 0 3 0 1 41.587 41.649 2 0.0078225 10310 20230619_1882_Aki_TMTPro18x_K_F3 122.18 14.992 59510 35044 74448 88917 98424 118420 82865 100840 92867 64877 103840 136020 89577 92464 104530 56851 126170 119520 55045 32540 74843 85608 99964 116950 84828 103250 94339 69670 105650 133220 92712 94892 106940 61380 120470 112880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33842000 30030 1418 28209 56395 45551 45551 1 9606 Homo sapiens 0.020541032521919078 VTQNLPMK Oxidation (M) 945.49535 0.49535211 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 1 0 1 0 1 43.611 43.611 3 0.04492 11640 20230619_1880_Aki_TMTPro18x_K_F1 48.794 20.282 35465 24675 43555 41213 54176 56576 45167 48104 56968 35351 46257 48260 41822 35267 49619 28673 44524 42458 32825 22734 43710 40440 55162 55827 46438 49379 56866 36840 47800 47943 43188 36471 49918 29766 42635 40189 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33425000 30031 3957 28210 56396 45552 45552 2626 1 9606 Homo sapiens 0.02042425162778727 VTQNLPMK Unmodified 929.50044 0.50043749 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 1.5 0.5 1 1 47.267 47.305 3 0.01352 13193 20230619_1881_Aki_TMTPro18x_K_F2 63.419 22.432 124820 92134 128180 131640 132780 155440 147320 145760 194650 124400 130000 106540 131630 102390 139560 139050 150840 126270 115380 84699 130040 129970 138080 155080 149110 148990 192810 126490 136360 108990 134650 107750 142390 138430 144040 120160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79476000 30032 3957 28210 56397;56398 45553 45553 1 9606 Homo sapiens 0.03286729025387558 VTQSNFAVGYK Unmodified 1212.6139 0.61388734 1286 A0A1L1UHR1;P21796;B3KTS5;C9JI87;B4DEI3 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 0 2.5 0.5 1 1 50.194 50.258 3 7.6184E-07 14546 20230619_1881_Aki_TMTPro18x_K_F2 143.79 118.94 888620 673230 827220 769910 1022300 1129700 1151900 1052600 1242800 900100 1003000 900690 1116500 826700 1046500 991010 937780 733760 820830 617400 848240 774650 1049900 1113300 1156100 1076400 1250300 918600 1044900 912600 1131600 864020 1059000 979280 896900 700400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2611700000 30033 1286 28211 56399;56400 45554;45555 45554 2 9606 Homo sapiens 0.01608495672121535 VTQVDGNSPVR Unmodified 1170.5993 0.59929991 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;P48444-2 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 0 0 4.5 0.5 1 1 37.947 38.015 2 4.073E-12 8703 20230619_1883_Aki_TMTPro18x_K_F4 237.92 185.13 81283 54637 86845 91224 115740 119540 102910 102300 128880 106090 129860 127570 137270 108060 110300 88058 155420 142190 75119 50347 88210 89421 117550 118300 105300 105800 129790 107730 133460 127810 138560 111170 114980 91920 148170 134530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 282230000 30034 2181 28212 56401;56402 45556 45556 1 9606 Homo sapiens 0.020824235239842892 VTSAVEALLSADSASR Unmodified 1575.8104 0.8104149 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 7.5 0.5 1 1 63.277 63.304 3 1.0527E-25 19326 20230619_1887_Aki_TMTPro18x_K_F7 224.52 199.82 60426 52928 58964 63323 57308 64050 62306 61373 70661 71138 76192 69418 74964 66082 71618 76101 74784 77177 55888 48533 60019 63112 59807 64661 62811 63156 71739 71326 77817 70467 76400 68802 73086 76366 71539 73283 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 528110000 30035 1213 28213 56403;56404 45557;45558 45557 2 9606 Homo sapiens 0.045542109845882806 VTSEGAGLQLQK Unmodified 1229.6616 0.66156582 532 A0A024R8Q1;P10253 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase yes no 0 0 0 7 0 1 48.863 48.95 2 8.878E-10 13124 20230619_1887_Aki_TMTPro18x_K_F7 225.01 152.52 40813 33486 37705 50271 50742 53486 53119 55206 65688 51596 61792 70292 57066 54724 64602 62412 65300 70398 37716 30789 38837 49395 51741 53864 53794 56191 65992 52921 63452 69968 58796 57336 65588 63053 62507 66761 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35855000 30036 532 28214 56405 45559 45559 1 9606 Homo sapiens 0.05592149872336449 VTSHAIVK Unmodified 853.50215 0.50215205 1958 E7ESP9;A5YM63;P07197;E7EMV2;B4DJT7;P07197-2 NEFM Neurofilament medium polypeptide yes no 0 0 0 1.5 0.5 1 1 36.74 36.769 3 0.001462 8715 20230619_1880_Aki_TMTPro18x_K_F1 114.28 82.06 57948 33787 74201 64019 63622 76876 48962 52422 59958 30850 50595 40191 36069 36150 68750 30966 51928 37478 53611 31213 73785 62288 66563 76131 50637 54691 59963 32696 51706 40296 38853 37126 68189 31696 49747 35581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105770000 30037 1958 28215 56406;56407 45560 45560 1 9606 Homo sapiens 0.06954106105649771 VTSLTACLVDQSLR Unmodified 1561.8134 0.81339179 2185 Q59GA0;E9PIM6;B0YJA4;E9PNQ8;P04216 THY1 Thy-1 membrane glycoprotein yes no 0 0 0 2 0 1 61.729 61.739 2 6.7608E-05 19392 20230619_1881_Aki_TMTPro18x_K_F2 145.14 109.91 403220 356000 428030 405730 306820 393930 485320 512080 505580 514160 532260 540340 594740 455730 524610 561410 565650 645040 373220 326280 430930 405870 333330 401860 479820 514900 514960 520060 547650 544550 601320 478870 537180 567000 541360 611480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 245520000 30038 2185 28216 56408 45561 45561 1 9606 Homo sapiens 0.05495762837699658 VTSSIPVFDLQDGGR Unmodified 1589.8049 0.80493559 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67;Q7Z3K3-3;A0A8V8TQQ8 POGZ Pogo transposable element with ZNF domain yes no 0 0 0 6.5 0.5 1 1 60.613 60.663 2 8.3067E-14 18093 20230619_1887_Aki_TMTPro18x_K_F7 231.66 178.87 34014 28797 35181 34877 32898 38353 42181 38587 40076 37223 47683 45173 49527 37732 51850 46852 41652 50470 31468 26413 35613 34778 34597 38521 41930 39382 41221 37932 48647 45278 50549 39670 52097 47154 40012 47866 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56870000 30039 4164 28217 56409;56410 45562 45562 1 9606 Homo sapiens 0.03362532192750223 VTSSIPVFDLQDGGRK Unmodified 1717.8999 0.89989861 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67;Q7Z3K3-3;A0A8V8TQQ8 POGZ Pogo transposable element with ZNF domain yes no 0 0 1 2 0 1 55.623 55.644 3 3.9044E-06 16814 20230619_1881_Aki_TMTPro18x_K_F2 87.157 36.781 83293 78255 81121 80948 85031 94703 85542 88440 87367 100460 90720 94765 113290 80342 100290 118350 108530 100150 77073 71646 82640 81756 88027 94616 86319 91082 89163 100670 93950 95994 114190 85413 102760 117240 103700 95345 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63489000 30040 4164 28218 56411 45563 45563 1 9606 Homo sapiens 0.06966465663913368 VTTADPYASGK Unmodified 1108.5401 0.5400537 2073 A8K5D5;P49406;A0A0A0MRF4;S4R3W9;B4DIG4 MRPL19 39S ribosomal protein L19, mitochondrial yes no 0 0 0 6 0 1 43.971 44.063 2 2.3757E-24 11258 20230619_1886_Aki_TMTPro18x_K_F6 208.63 176.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30041 2073 28219 56412 45564 45564 1 9606 Homo sapiens -0.009874724901919762 VTTCGTDVIALTK Unmodified 1377.7174 0.71736614 977 A0A0B4J1R7;Q96B45 C10orf32-ASMT;C10orf32 UPF0693 protein C10orf32 yes no 0 0 0 8 0 1 55.325 55.387 3 0.001013 15880 20230619_1888_Aki_TMTPro18x_K_F8 94.122 78.231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30042 977 28220 56413 45565 45565 1 9606 Homo sapiens 0.043616149976060115 VTTFEHQYVSAIK Unmodified 1521.7827 0.78274359 3525 Q59FM5;P29992 GNA11 Guanine nucleotide-binding protein subunit alpha-11 yes no 0 0 0 1 0 1 51.978 51.978 3 1.4446E-11 15171 20230619_1880_Aki_TMTPro18x_K_F1 190.34 136.37 99300 81880 88412 120190 93670 109460 115180 118560 115470 129190 124880 136060 144650 115070 117270 137810 138660 154000 91741 75264 91010 118010 97502 111650 114910 120800 118090 130140 128610 137060 145650 120660 121020 138960 132570 146040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78603000 30043 3525 28221 56414 45566 45566 1 9606 Homo sapiens 0.04272352514999511 VTTFVSEDALPETTFPALASFK Unmodified 2370.1995 0.19949425 113 A0A024R0X0;Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;A0A087WZS7 AP1GBP1;SYNRG Synergin gamma yes no 0 0 0 8 0 1 65.179 65.199 3 4.3506E-05 20049 20230619_1888_Aki_TMTPro18x_K_F8 81.807 72.019 3137.9 3295.7 2427.5 2556.8 1741.1 2625.7 2897.8 3169.1 3969.1 4207.3 3628.8 4057.2 4041 4058.3 3871.3 5903.3 3040 3725.7 2901.2 3010 2516.7 2648.4 1903 2664.2 2888.1 3226 3971.2 4191.7 3760.3 4127.5 4106.6 4277.1 3905.8 5775.3 2921.5 3559.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11338000 30044 113 28222 56415 45567 45567 1 9606 Homo sapiens 0.06920248644337335 VTTHPLAK Unmodified 865.50215 0.50215205 4402 V9HWC2;Q99497;K7ELW0;K7EN27 HEL-S-67p;PARK7 Protein deglycase DJ-1 yes no 0 0 0 1.5 0.5 1 1 37.101 37.131 3 0.053359 8894 20230619_1880_Aki_TMTPro18x_K_F1 51.346 35.192 203550 132580 214330 241020 274900 268020 237280 245870 226480 214910 247870 259140 237500 197280 194660 169500 293810 268020 188060 122340 217840 234630 279360 268370 241200 251920 232230 220150 252900 258790 240730 204230 204000 176390 279980 253620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2196600000 30045 4402 28223 56416;56417 45568;45569 45568 2 9606 Homo sapiens 0.06402106105645089 VTTLPGHIQAVYVQNVVK Unmodified 1965.1047 0.10474643 1855 A0A8V8TQW4;O14617-4;O14617;O14617-5;O14617-2;Q6PK82;O14617-3 AP3D1 AP-3 complex subunit delta-1 yes no 0 0 0 4 0 1 56.178 56.186 3 1.4191E-09 16720 20230619_1883_Aki_TMTPro18x_K_F4 131.56 112 38911 30852 38596 40089 35873 37429 39020 40733 40926 40574 38829 39229 44116 35625 42850 44218 40695 45274 35971 28324 39196 39697 37541 38130 39240 41383 41521 40966 40182 39771 44781 37337 43485 44353 38989 42974 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 260470000 30046 1855 28224 56418 45570 45570 1 9606 Homo sapiens 0.16079824474286397 VTTMDAELEFAIQPNTTGK Oxidation (M) 2080.9987 0.99868596 3456;2184 P15311;Q6NUR7;B2R6J2;V9HW42;B7Z5V2;J7M2B1;Q6PJT4;E9PNP4;P35241;B0YJ88;P35241-5;A0A2R8Y5S7;A0A2R8Y7M3;Q05CU6;Q6PKD3;V9HWC0;P26038;P35241-3 EZR;HEL-S-105;EZR-ROS1;MSN;RDX;HEL70 Ezrin;Tyrosine-protein kinase receptor;Radixin;Moesin no no 0 1 0 5 0 1 59.619 59.673 3 1.6597E-10 17768 20230619_1885_Aki_TMTPro18x_K_F5 132.51 121.46 36167 27277 28532 34060 80576 34493 33041 39094 35944 36137 48118 29408 37916 39083 42241 44618 35598 47482 33368 25037 30347 33847 77897 35105 36182 39519 36989 36479 48229 30592 39255 40275 42532 44900 34206 45025 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38673000 30047 3456;2184 28225 56419 45571 45571 1358 1 9606 Homo sapiens 0.001426560560503276 VTTQTSLPLFR Unmodified 1261.703 0.7030367 3862 Q59GU6;Q53HL9;Q53GY8;Q13596;Q13596-2;Q13596-3;H0YK43 SNX1 Sorting nexin-1 yes no 0 0 0 4.5 0.5 1 1 56.192 56.227 2 1.5932E-08 16732 20230619_1883_Aki_TMTPro18x_K_F4 177.06 130.64 82437 78366 86052 89610 86065 94605 97832 90641 108720 106840 96225 91396 106100 85983 104910 120060 106530 106180 76332 71808 87141 89662 89696 95222 98285 93322 109690 106650 99740 93346 107900 90692 106880 119280 101910 101000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 282930000 30048 3862 28226 56420;56421 45572 45572 1 9606 Homo sapiens 0.08265330631661527 VTTVTEIGK Unmodified 946.53351 0.53351176 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3ITI7 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 6.5 0.5 1 1 48.4 48.482 2 2.5162E-08 12878 20230619_1887_Aki_TMTPro18x_K_F7 208.72 131.43 210300 164910 180390 192630 246730 251640 247490 222420 312640 269450 292580 268950 299790 249660 229860 311800 360310 287270 194180 151250 186810 193040 251050 249400 251360 230510 313900 269950 301170 272560 302540 261450 242580 310720 342980 273370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 337950000 30049 3647 28227 56422;56423 45573 45573 1 9606 Homo sapiens 0.058106343490862855 VTTVVATPGQGPDRPQEVSYTDTK Unmodified 2545.266 0.26601069 2663 P49841-2;P49841;B5BUC0;Q6FI27;A0A7I2YQK0;A0A3B3ITW1;A0A7I2V3D8;A0A7I2V2V4;A0A7I2V441;A0A7I2V4F3;A0A7I2V5K9;A0A7I2V3T3 GSK3B Glycogen synthase kinase-3 beta yes no 0 0 1 6 0 1 47.801 47.881 4 6.1153E-13 12966 20230619_1886_Aki_TMTPro18x_K_F6 128.04 111.74 38131 27343 34980 35207 31946 36701 34429 30996 39711 46479 45076 47035 54351 40915 40446 58965 57965 47345 35207 25111 35749 34926 33515 36869 34745 32490 40418 46157 46400 47527 54497 43366 42437 58259 55217 45130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 291210000 30050 2663 28228 56424 45574 45574 1 9606 Homo sapiens 0.05518832468260371 VTVAGLAGK Unmodified 814.49125 0.49125301 4402 V9HWC2;Q99497;K7ELW0 HEL-S-67p;PARK7 Protein deglycase DJ-1 yes no 0 0 0 2.5 0.5 1 1 50.194 50.258 2 0.0001184 14554 20230619_1881_Aki_TMTPro18x_K_F2 152.63 36.088 1273000 845480 975750 1118600 1088100 1424100 1228600 1219400 1860400 1428700 1471300 1787600 1983600 1664600 1239100 2520800 2408600 2448500 1173500 776940 1018800 1110800 1128900 1411300 1249500 1265500 1843100 1445100 1551300 1795500 1974400 1766200 1344700 2511000 2293500 2326200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1538999999.9999998 30051 4402 28229 56425;56426 45575;45576 45575 2 9606 Homo sapiens 0.07658703731374317 VTVAGLAGKDPVQCSR Unmodified 1656.8617 0.86173896 4402 V9HWC2;Q99497;K7ELW0 HEL-S-67p;PARK7 Protein deglycase DJ-1 yes no 0 0 1 4 1.41 1 1 1 1 1 48.527 48.595 3 1.051E-05 13610 20230619_1882_Aki_TMTPro18x_K_F3 90.561 66.729 375820 365340 356110 329100 341550 348440 435860 401370 358830 428330 427090 383430 344630 289490 430890 314340 295330 266190 347770 334080 363030 336090 357970 352470 431670 407100 372850 429730 431330 387960 358180 303000 428520 313270 283680 253440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4949000000 30052 4402 28230 56427;56428;56429;56430;56431 45577;45578 45578 2 9606 Homo sapiens 0.0595825647762922 VTVDNQGEKPVLVK Unmodified 1524.8512 0.8511575 547 B4DF62;B4DS22;A0A024R8Y1;Q9P215 POGK Pogo transposable element with KRAB domain yes no 0 0 1 8 0 1 48.601 48.668 3 7.6932E-07 12974 20230619_1888_Aki_TMTPro18x_K_F8 134.21 104.87 46235 43361 49207 64911 62810 67818 64153 60028 68421 69417 71981 73787 74071 58470 66819 77548 76176 77122 42814 39848 50044 63762 64173 68162 64724 62142 69628 69781 73789 74192 75161 61846 68650 77565 72801 73252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42640000 30053 547 28231 56432 45579 45579 1 9606 Homo sapiens 0.10972597094814773 VTVDQVTDR Unmodified 1031.5247 0.52473799 4242 Q8NBF2 NHLRC2 NHL repeat-containing protein 2 yes yes 0 0 0 3 0 1 40.634 40.693 2 3.2188E-05 9895 20230619_1882_Aki_TMTPro18x_K_F3 166.66 121.32 106510 75609 87605 91303 100540 93892 89819 93428 128620 119630 124860 133600 130580 124210 110750 137620 149530 137750 98259 69394 90742 90971 103110 94802 92405 96179 128700 119960 128560 134650 132280 129070 115250 138020 142610 130870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108030000 30054 4242 28232 56433 45580 45580 1 9606 Homo sapiens 0.010236607125989394 VTVDTGVIPASEEK Unmodified 1443.7457 0.74568938 817 Q8N5A0;A0A087WUT6;O60841;A0JLR8;Q05CQ1 EIF5B Eukaryotic translation initiation factor 5B yes no 0 0 0 3.67 0.471 1 2 51.681 51.728 2;3 8.9041E-06 14782 20230619_1883_Aki_TMTPro18x_K_F4 151.26 126.91 115840 95433 117660 124290 128710 158900 131740 136700 190530 140250 144130 136100 137130 122810 143450 170370 158480 153680 107130 87604 119600 123570 133130 157480 134450 141240 188770 141560 149700 138010 140570 129590 146740 169430 151450 146160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 327080000 30055 817 28233 56434;56435;56436 45581;45582 45582 2 9606 Homo sapiens 0.04156636178595363 VTVLFAGQHIAK Unmodified 1282.7398 0.73975656 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98 FLNA Filamin-A yes no 0 0 0 4.5 0.5 1 1 53.193 53.238 3 1.0171E-09 15127 20230619_1885_Aki_TMTPro18x_K_F5 173.76 135.52 703900 572440 676940 669330 805250 909980 810650 777910 987140 648960 644600 663330 619750 535260 809190 661460 694750 655910 650650 524940 691850 671230 826870 898830 822150 800330 981080 663940 676990 668460 642450 562990 812360 662900 665570 623190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1307600000 30056 3484 28234 56437;56438 45583;45584 45584 2 9606 Homo sapiens 0.1096962724820969 VTVLGHVQR Unmodified 1007.5876 0.58761301 116;3469 P17858;P17858-2;Q7L2M7;P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;B4E162 PFKL;PFKM ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase no no 0 0 0 3.5 0.5 1 1 37.612 37.661 3 2.8797E-07 8639 20230619_1882_Aki_TMTPro18x_K_F3 168.27 168.27 85367 83747 81779 72956 92142 104530 87117 82212 107900 21423 20878 17750 15775 15165 50775 20910 25278 16598 79007 76561 83472 75060 94819 102830 88713 83916 105000 24981 25349 18168 17965 16020 49440 20776 24372 15843 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 307140000 30057 3469;116 28235 56439;56440 45585 45585 1 9606 Homo sapiens 0.0841227129131994 VTVLTLQDK Unmodified 1015.5914 0.59136099 1535 B3KMZ6;B2RDF5;A0A3R5W301;Q9UBT2;Q9UBT2-2;B3KNA3 UBA2 SUMO-activating enzyme subunit 2 yes no 0 0 0 8 0 1 54.634 54.701 3 0.00077631 15587 20230619_1888_Aki_TMTPro18x_K_F8 103.55 57.524 109350 88621 103480 108590 106620 118860 115510 102780 129210 95633 89021 88138 98163 74591 93743 96037 98140 89650 101060 81305 105680 108160 110770 119050 116330 105980 129190 96885 93641 89369 99648 78565 95652 95806 93798 85249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222870000 30058 1535 28236 56441 45586 45586 1 9606 Homo sapiens 0.08418896274508825 VTVMSTINPTK Unmodified 1189.6377 0.63765925 72 B4DZQ5;A0A024QZY5;Q13523;H0YDJ3 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 0 0 0 3 0 1 52.341 52.404 3 0.001647 15212 20230619_1882_Aki_TMTPro18x_K_F3 76.332 61.663 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30059 72 28237 56442 45587 45587 1 9606 Homo sapiens 0.05042593114308147 VTVPLVR Unmodified 782.50142 0.50142377 2053 Q5QPL9;A8K4T9;Q53GL6;Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1 RALY RNA-binding protein Raly yes no 0 0 0 3 0 1 47.628 47.707 2 0.018143 13114 20230619_1882_Aki_TMTPro18x_K_F3 107.66 23.857 315040 247140 280960 269020 301010 324670 339970 309790 389640 352930 363140 382040 402310 333870 346500 395110 424740 387490 290970 226520 288490 270770 312180 323860 341970 318700 393040 355360 375650 384850 406740 349230 357890 395530 405370 368260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1409000000 30060 2053 28238 56443 45588 45588 1 9606 Homo sapiens 0.10147311456603347 VTVTNPDTGR Unmodified 1058.5356 0.53563702 120 A0A024R104;Q12860-2;Q12860 CNTN1 Contactin-1 yes no 0 0 0 4 0 1 36.603 36.649 2 1.1883E-05 8168 20230619_1883_Aki_TMTPro18x_K_F4 164.68 129.24 54488 37617 70058 60434 28951 29571 35412 39201 38575 53896 96302 101140 70694 79251 83738 43771 99196 91048 50453 34641 69164 58766 33443 32464 35582 39854 41361 55064 95015 99697 73692 80541 85543 47351 94704 86007 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55837000 30061 120 28239 56444 45589 45589 1 9606 Homo sapiens 0.008710630869245506 VTVVCEPEDYVVVSTEMQSSESK Oxidation (M) 2617.1775 0.17751454 3534;2560 B4DP06;C9JLK0;V9HWH7;P31939;B2R7P8;P31939-2 ATIC;HEL-S-70p Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 1 0 2.5 0.5 1 1 59.22 59.233 3 7.884E-08 18051 20230619_1882_Aki_TMTPro18x_K_F3 101.6 93.019 4750 5246.7 3358.7 5301.9 3762.3 4364.4 6211.5 4275.3 3944.3 5176.6 6490.5 5755.7 6277.9 4995.7 5818.9 6303 5071.7 5903.5 4391.2 4800.3 3547.9 5337.4 3939.4 4485.6 6045.7 4406.7 4248.4 5198.2 6526.9 5795.8 6386.7 5247.9 5887.1 6289.5 4865.6 5608.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6398900 30062 2560;3534 28240 56445;56446 45590;45591 45591 1556 2 9606 Homo sapiens -0.06638711948789933 VTWAHPEFGQVLASCSFDR Unmodified 2206.0266 0.026572462 3165 K7ELV2;Q96EE3;Q96EE3-1;K7EP88;K7EPZ5 SEH1L Nucleoporin SEH1 yes no 0 0 0 1 0 1 59.929 59.929 3 5.526E-24 18461 20230619_1880_Aki_TMTPro18x_K_F1 191 161.24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30063 3165 28241 56447 45592 45592 1 9606 Homo sapiens -0.02819976173213945 VTWDGHSGSMAR Oxidation (M) 1318.5724 0.57243324 146 A0A024R1K8;Q15459;Q15459-2;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 1 0 5.5 0.5 1 1 34.62 34.687 3 6.6232E-05 7501 20230619_1886_Aki_TMTPro18x_K_F6 112.95 97.512 37878 28323 42960 43336 45964 49859 46021 45700 53780 46877 55242 57007 55683 43734 46076 48915 53441 63871 35045 26058 43264 42600 47493 49811 46650 47013 54383 47629 56628 56953 56336 45860 47447 49898 51133 60469 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54469000 30064 146 28242 56448;56449 45593 45593 68 1 9606 Homo sapiens -0.0741100835882662 VTWDGHSGSMAR Unmodified 1302.5775 0.57751861 146 A0A024R1K8;Q15459;Q15459-2;B4E091 SF3A1 Splicing factor 3A subunit 1 yes no 0 0 0 7 0 1 38.569 38.633 3 0.00018532 8718 20230619_1887_Aki_TMTPro18x_K_F7 113.93 100.98 38567 24711 37544 38187 41911 46994 39713 40255 50962 41084 48455 51037 43105 40350 36384 45111 48645 53695 35605 22753 38291 37553 43156 46677 40524 41615 51142 41801 49602 50990 43882 42216 37843 45710 46460 50890 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32989000 30065 146 28242 56450 45594 45594 1 9606 Homo sapiens -0.06166704496195052 VTWDSSFCAVNPR Unmodified 1537.6984 0.69836203 676 Q9ULV4-3;Q9ULV4-2;Q9ULV4;Q59EA2;A0A024RBI5;B3KN06;Q53G58;B4DMH3;F8VTT6;F8W1H8;F8VVB7;F8VRE9;F8VSA4;F8VUX3 CORO1C Coronin-1C;Coronin yes no 0 0 0 4.5 3.5 1 1 55.507 55.538 2;3 4.1068E-16 15937 20230619_1888_Aki_TMTPro18x_K_F8 178.1 169.53 137460 111110 129770 129360 125730 129690 142790 126090 145710 168850 167210 163350 176600 152560 173980 194780 158320 176310 127040 101880 132390 129200 131290 131100 143090 130260 149260 168160 170970 165760 179790 159920 176220 193970 151750 167590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 390220000 30066 676 28243 56451;56452 45595;45596 45596 2 9606 Homo sapiens -0.0489792157343345 VTWDSTFCAVNPK Unmodified 1523.7079 0.70786408 343 A0A024R5K1;Q9BR76;A0A087WW53;F5H390;Q59F81;B4DIU2;F5H0D2 CORO1B Coronin;Coronin-1B yes no 0 0 0 2 0 1 59.22 59.233 3 4.1742E-06 18326 20230619_1881_Aki_TMTPro18x_K_F2 106.49 90.355 54577 47092 49515 48251 49558 47517 51766 55918 56258 61753 58024 50639 58098 44323 64654 50877 52383 59039 50444 43124 50700 48672 51488 48344 52236 56678 57174 61731 59427 51697 59548 46330 64878 51523 50284 55965 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24113000 30067 343 28244 56453 45597 45597 1 9606 Homo sapiens -0.03304153287876943 VTWTEAAGSIR Unmodified 1189.6091 0.60913632 1972 H7C3I5;A6NND8;A6NHJ8;A6NMA8;O95825;H7C3S0;C9K0F7;F8WF64;O95825-2;C9JQD0;C9JAL0;C9JZK8 CRYZL1 Quinone oxidoreductase-like protein 1 yes no 0 0 0 7 0 1 50.898 50.975 2 0.010309 14026 20230619_1887_Aki_TMTPro18x_K_F7 81.335 61.172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30068 1972 28245 56454 45598 45598 1 9606 Homo sapiens 0.02191611529360671 VTYHPDGPEGQAYDVDFTPPFR Unmodified 2507.1394 0.13935361 3911 Q15046;Q15046-2 KARS Lysine--tRNA ligase yes no 0 0 0 5.5 0.5 1 1 57.591 57.655 3 1.7789999999999998E-38 16867 20230619_1885_Aki_TMTPro18x_K_F5 240.68 233.41 20376 18137 19484 19165 20728 22134 18450 20249 20955 20113 24057 20443 20791 20599 22347 21642 23545 22846 18844 16612 19878 19320 21371 22124 18829 20808 21325 20349 24373 20761 21416 21288 22759 21805 22512 21689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 251150000 30069 3911 28246 56455;56456 45599 45599 1 9606 Homo sapiens -0.053930489661979664 VTYMEEER Oxidation (M) 1071.4543 0.45427516 3544 P34932;B4DH02;V9HW33;Q59GF8;O14992;Q7KYN0 HSPA4;HEL-S-5a;HS24/p52;HS24/P52 Heat shock 70 kDa protein 4 yes no 0 1 0 1 0 1 35.244 35.244 2 0.011696 8043 20230619_1880_Aki_TMTPro18x_K_F1 93.166 79.17 106920 74048 93271 109980 129960 135220 117780 123960 163470 139820 164790 165230 153140 135540 133040 153290 168270 159220 98667 68122 96526 108380 131810 134540 120860 127820 163910 141280 168460 165580 155780 141700 137690 154050 160600 151200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218690000 30070 3544 28247 56457 45600 45600 2213 1 9606 Homo sapiens -0.07859380667355254 VTYMEEER Unmodified 1055.4594 0.45936054 3544 P34932;B4DH02;V9HW33;Q59GF8;O14992;Q7KYN0 HSPA4;HEL-S-5a;HS24/p52;HS24/P52 Heat shock 70 kDa protein 4 yes no 0 0 0 1.5 0.5 1 1 41.194 41.232 2 0.0010173 10362 20230619_1881_Aki_TMTPro18x_K_F2 150.88 96.677 244920 189950 230180 232750 236230 278510 273520 259080 320960 311950 336140 339800 353440 303160 288820 392560 379530 339620 226280 174300 235200 232160 246110 277680 275070 267450 324880 313340 344880 342580 357210 318520 300390 389790 361980 323280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 463470000 30071 3544 28247 56458;56459 45601;45602 45602 2 9606 Homo sapiens -0.06615076804746423 VTYVVLDEADR Unmodified 1278.6456 0.6455814 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 2.5 0.5 1 1 53.967 54.007 2 5.9568E-06 16182 20230619_1881_Aki_TMTPro18x_K_F2 156.57 118.98 64679 49066 60186 67932 65109 77498 79793 74762 86509 76404 75652 78604 87084 74377 85230 83731 88024 95563 59745 45085 61653 67156 67682 77543 79779 76621 87305 77222 78673 79555 88436 77380 86845 84660 84246 90613 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139030000 30072 1002 28248 56460;56461 45603 45603 1 9606 Homo sapiens 0.01740443635412703 VVACNLYPFVK Unmodified 1308.69 0.69002918 3534;2560 B4DP06;C9JLK0;V9HWH7;P31939;B2R7P8;P31939-2 ATIC;HEL-S-70p Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 0 4.5 0.5 1 1 61.563 61.589 3 0.00092453 18974 20230619_1883_Aki_TMTPro18x_K_F4 91.584 66.367 321500 288120 316010 367550 294160 348130 336410 344760 363780 325210 312000 294310 329520 262140 359130 376040 305360 324630 297420 264350 321470 364340 308590 353360 337690 351990 366970 328810 323340 299320 337000 277530 361810 373130 292820 308810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 597570000 30073 2560;3534 28249 56462;56463 45604;45605 45604 2 9606 Homo sapiens 0.04803176247878582 VVAEELENVR Unmodified 1156.6088 0.60880197 3985 Q53EY9;Q8NEZ5;Q8NEZ5-3;H3BTH6 FBXO22 F-box only protein 22 yes no 0 0 0 2 0 1 51.211 51.256 2 1.0978E-05 15015 20230619_1881_Aki_TMTPro18x_K_F2 165.15 125.05 123830 108010 118060 123570 119820 139710 129850 120780 140540 151740 129370 134730 169120 128300 140590 168280 161050 165540 114510 99002 120480 123750 124660 139630 130670 125550 142290 151190 135040 137320 169900 134770 144740 168220 153920 157240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117110000 30074 3985 28250 56464 45606 45606 1 9606 Homo sapiens 0.03676191809518059 VVAEVYDQER Unmodified 1206.5881 0.58806652 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 0 0 2.5 1.12 1 1 1 1 46.274 46.324 2 1.278E-13 12773 20230619_1881_Aki_TMTPro18x_K_F2 228.31 188.04 388230 263500 289580 358580 308060 375480 360740 341330 457490 443350 439120 514840 517880 443500 323760 602570 557410 499970 357840 242190 303110 354360 320630 377490 363560 353940 459960 444870 455070 516960 517120 467980 347050 596400 530670 476170 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 567300000 30075 1044 28251 56465;56466;56467;56468 45607;45608 45608 2 9606 Homo sapiens -0.006963985701531783 VVAIGECGLDFDR Unmodified 1449.6922 0.69221402 2876 G5EA19;U3KQS5;E5RG17;Q6P1N9;H0YBX2;E5RGF2;A0A0D9SGD3;Q6P1N9-2;E5RG62;E5RK70 TATDN1 Putative deoxyribonuclease TATDN1 yes no 0 0 0 3 0 1 59.254 59.283 3 0.016754 18148 20230619_1882_Aki_TMTPro18x_K_F3 61.167 52.768 18472 17160 15607 19322 17449 21528 18447 16933 21384 14065 15179 17197 17692 13602 17323 17336 16165 18665 17073 15723 16145 19360 18034 21495 18625 17553 21351 14481 15993 17195 17951 14353 17559 17436 15495 17705 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3063200 30076 2876 28252 56469 45609 45609 1 9606 Homo sapiens -0.014644398049767915 VVAIYDYTK Unmodified 1070.5648 0.56481189 993 A0A0C4DG21;F8WAL6;Q9NYB9-2;Q9NYB9;E7EW77;Q9NYB9-4;A0A7D9NKC8;E7EP65;E9PEZ7;Q9NYB9-3;B7Z836;H0Y6B5;B7Z612;Q53SH3;Q59G41;Q13802;A0A0A0MRT6;B4DKX2;B4DG63;B6VEX4;B6VEX5;B7Z5L1;B7Z617;B4DMM5;B7Z9E9;B4DSH8;B7ZAM8;Q8IZP0-9;Q8IZP0;B6VEX3;Q8IZP0-12;Q8IZP0-6;Q8IZP0-8;Q8IZP0-5;Q8IZP0-3;Q8IZP0-4;Q8IZP0-2;Q8IZP0-7;Q8IZP0-11;Q8IZP0-10 ABI2;ABI-2;argBPIB;ABI1 Abl interactor 2;Abl interactor 1 yes no 0 0 0 8 0 1 56.295 56.352 2 0.00070247 16320 20230619_1888_Aki_TMTPro18x_K_F8 126.41 95.842 83859 65290 81660 88784 81579 88276 94736 97687 108480 66186 66894 57587 61668 45225 84631 73742 73100 55592 77502 59975 83181 87722 85093 89497 95168 98306 107940 68366 70356 58525 64163 48578 84952 72667 69932 53058 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29579000 30077 993 28253 56470 45610 45610 1 9606 Homo sapiens 0.03235207383158922 VVALIGVATAADTLVTK Unmodified 1640.9713 0.97127264 4596 Q9NUJ1-2;Q9NUJ1;Q9NUJ1-3 ABHD10 Mycophenolic acid acyl-glucuronide esterase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 65.5 65.522 3 2.8628E-09 20621 20230619_1883_Aki_TMTPro18x_K_F4 100.43 84.855 10779 8989.2 8930.9 11117 8704.8 9667.3 12942 10506 11814 12567 11674 13356 15000 13374 16037 11022 12148 15733 9954.1 8246.9 9238.9 11033 9171.6 9906.2 12760 10741 12101 12614 12151 13509 15251 13677 16047 11395 11685 14881 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49814000 30078 4596 28254 56471;56472 45611 45611 1 9606 Homo sapiens 0.17642585368571417 VVALSMSPVDDTFISGSLDK Unmodified 2080.0398 0.039822489 223 Q6UXN9;A0A024R333 WDR82;TMEM113 WD repeat-containing protein 82 yes no 0 0 0 7 0 1 64.03 64.06 3 1.7142E-05 19687 20230619_1887_Aki_TMTPro18x_K_F7 93.371 82.736 56611 51796 56032 62463 54527 69117 75984 57683 60143 71853 60699 58952 77437 52442 67758 65969 62385 71542 52381 47492 57012 62280 57343 69111 74835 60151 62274 71452 62994 60195 77934 55117 68765 66390 59805 67858 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20638000 30079 223 28255 56473 45612 45612 1 9606 Homo sapiens 0.04300417095510056 VVAPTISSPVCQEQLVEAGR Unmodified 2139.0994 0.099403054 1292 A0A1S5UZ07;Q9Y490 TLN1 Talin-1 yes no 0 0 0 6.5 0.5 1 1 56.222 56.288 3 2.0352999999999998E-66 16537 20230619_1886_Aki_TMTPro18x_K_F6 238.94 205.58 56427 45689 53508 57343 52327 58762 55973 56411 71926 61998 65325 61461 71543 62496 68849 75900 64576 77937 52151 41928 54601 56971 54584 59259 56728 57949 72086 62378 67586 62499 72698 65143 69867 76149 61920 73954 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 648260000 30080 1292 28256 56474;56475 45613;45614 45613 2 9606 Homo sapiens 0.07541732829577086 VVATNTLGR Unmodified 929.52943 0.52942943 120 A0A024R104;Q12860-2;Q12860 CNTN1 Contactin-1 yes no 0 0 0 3.67 3.09 1 1 1 39.723 39.742 2 0.00015078 9952 20230619_1880_Aki_TMTPro18x_K_F1 147.36 110.6 267960 195230 249640 211910 160990 161710 175420 180340 217960 241280 334770 311380 268640 266590 304850 236380 340840 303400 247470 178980 253450 212210 174630 167940 177700 184710 224150 242650 334970 311390 278210 274750 310930 242050 325510 287600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 105430000 30081 120 28257 56476;56477;56478 45615;45616;45617 45615 3 9606 Homo sapiens 0.06184589646045424 VVAVYGTLSDLLSVASSK Unmodified 1807.9931 0.99313029 2569 K7ENB5;K7EQN1;B4DPW0;Q7L273 KCTD9 BTB/POZ domain-containing protein KCTD9 yes no 0 0 0 5 0 1 66.928 66.971 3 0.012613 20953 20230619_1885_Aki_TMTPro18x_K_F5 57.52 45.906 6416.4 4850.3 3688.5 5730.1 4790.8 5585.5 3138.3 7269.7 6150.6 4451.7 4230.7 6440.1 6035.3 6025.4 6539.7 7305.2 7126.3 6722.4 5909.4 4449.5 4000.5 5712.5 4862.1 5696.1 3363 7224.2 6018.8 4709.9 4527 6433.4 6135.2 6289.5 6677.3 7286.2 6809.9 6392.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4283600 30082 2569 28258 56479 45618 45618 1 9606 Homo sapiens 0.12145345326530332 VVCSSGAVGNYSGGLAVK Unmodified 1723.8563 0.85631924 2462 B4DEE8;P16455;A0A0G2SKE6 MGMT Methylated-DNA--protein-cysteine methyltransferase yes no 0 0 0 2 0 1 52.67 52.703 3 2.7711E-10 15628 20230619_1881_Aki_TMTPro18x_K_F2 142.91 123.83 45043 37085 41702 58369 41410 57321 59653 57142 65676 53797 52731 54229 61918 42145 53779 55096 71906 70219 41626 34118 42766 57130 43621 57977 59244 58321 66015 54573 55126 54622 62472 44637 55832 55991 68612 66540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79505000 30083 2462 28259 56480 45619 45619 1 9606 Homo sapiens 0.02334532895133634 VVDALGNAIDGK Unmodified 1170.6245 0.62445203 3504 V9HW26;P25705;P25705-2;K7EK77;B4DGW3;K7ENJ4;K7ERX7;K7EJP1;K7EQH4 HEL-S-123m;ATP5A1 ATP synthase subunit alpha;ATP synthase subunit alpha, mitochondrial yes no 0 0 0 6 0.816 1 1 1 59.991 60.044 3 0.00023247 17909 20230619_1885_Aki_TMTPro18x_K_F5 96.745 76.958 265650 216300 257850 281430 248990 308590 306580 300770 339510 354500 360460 368070 354930 332230 349010 393820 360340 372030 245570 198560 262670 279190 261150 309700 306820 309250 344910 355790 368700 371830 362330 346960 355890 393450 344740 353550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1644699999.9999998 30084 3504 28260 56481;56482;56483 45620;45621 45620 2 9606 Homo sapiens 0.04596478326539 VVDDELATR Unmodified 1016.5138 0.51383895 1745 A0A8C8MSB2;B2R673;O00330-3;O00330;H0YD97;O00330-2 PDHX Pyruvate dehydrogenase protein X component, mitochondrial yes no 0 0 0 1 0 1 43.336 43.336 2 0.048979 11586 20230619_1880_Aki_TMTPro18x_K_F1 67.414 48.319 109830 81522 114840 116590 156230 146840 126340 138240 161610 130330 174140 193510 165150 154020 154160 152880 201540 193530 101540 74942 116830 115230 158040 146020 130260 141590 163020 134110 177800 192190 168450 160060 159550 155950 192320 183410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72169000 30085 1745 28261 56484 45622 45622 1 9606 Homo sapiens 0.006242583383368583 VVDGHLNLPVCK Unmodified 1349.7126 0.71255553 3821 Q6AWA4;Q12789;Q6AHZ7;Q12789-3;H3BU37;Q7Z7H4 DKFZp686O0870;GTF3C1;DKFZp686A111 General transcription factor 3C polypeptide 1 yes no 0 0 0 4.5 3.5 1 1 50.793 50.793 3 0.0005452 14682 20230619_1880_Aki_TMTPro18x_K_F1 93.345 78.314 57143 50680 53635 54248 56505 60751 64871 61190 71699 65814 56225 59534 78487 55449 52653 71455 70210 71743 52839 46422 54826 54609 58684 60974 65116 62606 72076 66089 59390 60583 78115 58244 55065 71505 67017 68133 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 139270000 30086 3821 28262 56485;56486 45623;45624 45623 2 9606 Homo sapiens 0.05168775645529422 VVDLEGSLK Unmodified 958.53351 0.53351176 4224 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 yes yes 0 0 0 5 0 1 55.305 55.369 3 0.00012108 15980 20230619_1885_Aki_TMTPro18x_K_F5 122.13 50.912 57267 47635 59504 61486 54945 70419 65552 65684 75146 68831 79097 76324 84021 67959 76037 82121 91487 88436 52975 43722 60219 61070 57794 70389 65794 67516 76138 69638 81163 76897 85206 71151 78342 82631 87364 83941 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34952000 30087 4224 28263 56487 45625 45625 1 9606 Homo sapiens 0.05258634349104341 VVDLLAPYAK Unmodified 1087.6277 0.6277465 3391 Q0QEN7;V9HW31;P06576;H0YH81;F8W079 ATP5B;HEL-S-271 ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial yes no 0 0 0 1.67 0.471 1 2 62.597 62.604 2;3 0.000335 19775 20230619_1881_Aki_TMTPro18x_K_F2 149.82 101.02 1027800 847070 938030 1030800 885530 1097500 1217800 1165500 1165200 1173300 1194700 1142700 1315000 1092400 1278200 1412700 1226000 1350300 949700 777040 960480 1026900 933570 1106000 1206900 1186300 1191300 1184300 1229700 1160600 1336200 1145500 1298400 1410600 1174400 1282700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1140700000 30088 3391 28264 56488;56489;56490 45626;45627 45627 2 9606 Homo sapiens 0.08743773171227076 VVDLLAQDADIVCR Unmodified 1585.8134 0.81339179 351 B4E1L0;A0A024R5Q7;P30520 ADSS Adenylosuccinate synthetase isozyme 2 yes no 0 0 0 4.5 0.5 1 1 63.317 63.343 2;3 5.6665E-09 19455 20230619_1885_Aki_TMTPro18x_K_F5 161.21 132.23 72486 57061 65868 64015 53319 72789 66818 65293 80555 76455 79482 74780 84621 75216 80199 98296 82023 98837 66960 52312 67276 64218 56885 72749 67033 67522 81233 76651 81798 76072 86015 78788 81839 98377 78577 93808 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 210610000 30089 351 28265 56491;56492 45628;45629;45630 45630 3 9606 Homo sapiens 0.04391762837713031 VVDLLVIK Unmodified 897.5899 0.58990443 1394 P56556;A0A2Y9D025;R4GN43 NDUFA6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 yes no 0 0 0 2 0 1 63.156 63.165 3 0.033022 20034 20230619_1881_Aki_TMTPro18x_K_F2 63.486 21.377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30090 1394 28266 56493 45631 45631 1 9606 Homo sapiens 0.13701306976417982 VVDLMAHMASK Oxidation (M) 1216.5944 0.59441423 3382 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q16768 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase yes no 0 1 0 5.67 3.3 1 2 48.116 48.154 3 0.00022781 13918 20230619_1880_Aki_TMTPro18x_K_F1 102.97 72.42 1338700 992200 1183300 1423300 1286800 1556500 1511500 1403300 1701200 1471200 1630600 1783700 1712500 1481500 1493200 1750200 1746700 2023300 1236000 912160 1218300 1402800 1336000 1559500 1516400 1446700 1718700 1493200 1680900 1786200 1735200 1552500 1537700 1768900 1670700 1917900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1865599999.9999998 30091 3382 28267 56494;56495;56496 45632;45633;45634 45632 1991;1992 3 9606 Homo sapiens -0.005219199346583991 VVDLMAHMASK Unmodified 1200.5995 0.59949961 3382 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q16768 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 2.5 0.5 1 1 58.78 58.801 3 6.5287E-07 17884 20230619_1882_Aki_TMTPro18x_K_F3 164.81 125.19 667350 434520 567140 632170 454460 740030 665510 639390 849000 805910 726680 1013500 678920 1047700 437340 1315100 561240 1251700 615530 399760 583510 623260 489050 736970 664310 664790 849580 812370 750750 1020500 686380 1091300 461100 1310900 540570 1187000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 10352000000 30092 3382 28267 56497;56498 45635;45636;45637 45636 3 9606 Homo sapiens 0.007223839279731692 VVDLMAHMASK 2 Oxidation (M) 1232.5893 0.58932885 3382 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q16768 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase yes no 0 2 0 7 0.816 1 1 1 41.137 41.19 3 0.0015572 9963 20230619_1888_Aki_TMTPro18x_K_F8 79.82 65.134 183130 112010 167340 202810 232060 221400 218670 222980 261070 196850 247670 265410 230950 215090 201470 228120 259740 288490 168940 103380 172460 197410 235380 222440 222520 227020 262780 202510 254080 264610 235020 224180 208760 232330 248150 273270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 462900000 30093 3382 28267 56499;56500;56501 45638;45639 45639 1991;1992 2 9606 Homo sapiens -0.017662237972444927 VVDLMAHMASKE Unmodified 1329.6421 0.64209271 3382 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q16768 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 1 6.6 2.15 1 1 1 1 6 64.735 64.767 3 4.5558E-07 17837 20230619_1887_Aki_TMTPro18x_K_F7 155.42 136.67 2961100 2529400 2606200 2503700 2320200 2790600 2878200 2867500 2682000 3247600 2918500 2868300 3074200 2555400 3134300 2944300 2638500 2725900 2736100 2315700 2672400 2536800 2449300 2802800 2864700 2933600 2756100 3248600 2990800 2917500 3134100 2667300 3157800 2941400 2529900 2591000 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 21227000000 30094 3382 28268 56502;56503;56504;56505;56506;56507;56508;56509;56510;56511 45640;45641;45642;45643;45644;45645;45646;45647 45641 8 9606 Homo sapiens -0.009542657344354666 VVDLMAHMASKE 2 Oxidation (M) 1361.6319 0.63192195 3382 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q16768 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase yes no 0 2 1 4.5 0.5 1 1 41.559 41.623 3 0.0059887 10230 20230619_1885_Aki_TMTPro18x_K_F5 67.456 59.28 628250 450440 501740 593970 866640 605710 682610 740730 705090 606800 812420 639240 690890 507680 632480 641640 646600 747560 579510 413780 525800 588230 863830 615530 699710 743610 720940 621220 821920 643910 705510 535680 645070 648490 619220 708550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1372800000 30095 3382 28268 56512;56513 45648 45648 1991;1992 1 9606 Homo sapiens -0.034428734596531285 VVDLMAHMASKE Oxidation (M) 1345.637 0.63700733 3382 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q16768 HEL-S-162eP;GAPDH;GAPD Glyceraldehyde-3-phosphate dehydrogenase yes no 0 1 1 6.6 1.02 1 1 2 1 49.343 49.423 3 0.0059835 13834 20230619_1886_Aki_TMTPro18x_K_F6 95.631 77.495 1746000 1480900 1595800 1707700 1929600 1875500 2000300 1901400 1992100 1792800 2043700 1870200 1885000 1651400 1924600 2006100 1852200 1821900 1613700 1357600 1639100 1708600 1977600 1885400 2012400 1938100 2031300 1820200 2086700 1889000 1930800 1728800 1952900 1999900 1772700 1732500 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3381599999.9999995 30096 3382 28268 56514;56515;56516;56517;56518 45649;45650;45651 45649 1991;1992 3 9606 Homo sapiens -0.02198569597067035 VVDPTPEQFQAFR Unmodified 1532.7623 0.7623425 1100 P04049-2;A0A8I5KQV4;C7TPG7;A0A0S2Z559;L7RRS6;A0A8I5KSV6;A0A0S2Z4L5;A0A8I5KTA5;A0A8I5KWF7;A0A8I5KSB0;B4E0X2;B4E1N6;H7C155;D7PBN3;P04049;A0A8I5QKZ6;A0A8I5QKU8;A0A8I5KS16;A0A8I5KYC4;A0A8I5KWS9 RAF1;SRGAP3:RAF1 RAF proto-oncogene serine/threonine-protein kinase yes no 0 0 0 6 0 1 55.93 56.005 2 0.0018521 16474 20230619_1886_Aki_TMTPro18x_K_F6 91.694 49.358 91996 69006 87843 80100 85166 93252 72297 65226 79458 79863 74625 71789 94335 71981 71473 91453 84878 73318 84990 63295 89465 80168 88347 92686 73911 69000 80432 79726 77621 73282 94521 75293 73924 90524 81001 69873 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19217000 30097 1100 28269 56519 45652 45652 1 9606 Homo sapiens 0.017271818551762408 VVDQPLK Unmodified 797.4647 0.46470391 1500 A0A3B3IRP5;Q6P1J9;A0A0S2Z5M9;A0A1B0GUB2 CDC73 Parafibromin yes no 0 0 0 5.5 0.5 1 1 44.913 44.996 2 0.060354 11706 20230619_1886_Aki_TMTPro18x_K_F6 85.064 37.157 91298 61737 98022 94926 126940 138170 105580 106640 129470 111500 130650 135530 138900 112210 124720 99533 137730 129680 84380 56827 99420 93646 128990 135670 108450 111230 130560 113220 134380 135630 140780 115910 127640 102010 131600 122880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87231000 30098 1500 28270 56520;56521 45653 45653 1 9606 Homo sapiens 0.05787014840041138 VVDQQQVER Unmodified 1099.5622 0.56218613 1951 P46100;P46100-4;P46100-3;P46100-5;P46100-2;A4LAA3;B4DHH8;A0A6Q8PHA4;B4DLE1;B4DLW1 ATRX Transcriptional regulator ATRX yes no 0 0 0 2 0 1 35.019 35.076 2 0.00054507 7710 20230619_1881_Aki_TMTPro18x_K_F2 132.01 81.97 33286 18900 40697 40679 57442 65304 44899 52842 51103 35527 63908 71113 53339 57406 61002 27125 73988 68063 30777 17498 40977 39564 58007 63822 46226 54360 52129 37941 64569 70052 55223 58048 62415 30157 70625 64235 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 16542000 30099 1951 28271 56522 45654;45655 45655 2 9606 Homo sapiens 0.01638751978248365 VVDRDSEEAEIIR Unmodified 1529.7686 0.76855009 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 1 1.33 0.471 2 1 42.001 42.027 2;3 9.395E-08 10746 20230619_1881_Aki_TMTPro18x_K_F2 146.79 105.25 170200 133520 166440 177310 187990 235760 200010 190700 232580 180460 205020 203250 196620 182450 201950 197530 196440 199130 157310 122620 169830 176160 194150 232810 201930 197670 233810 183780 211300 204640 201290 189600 204940 198390 188020 189110 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 992210000 30100 261 28272 56523;56524;56525 45656;45657;45658 45657 3 9606 Homo sapiens 0.024856552960500267 VVDRDSEEAEIIRK Unmodified 1657.8635 0.8635131 261 A0A024R3T8;P09874;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 2 2.5 0.5 1 1 42.583 42.656 3 9.779699999999999E-22 10742 20230619_1882_Aki_TMTPro18x_K_F3 228.97 190.61 89169 78071 88045 98605 106850 104190 97639 104710 101240 111330 117470 117960 121860 97206 99500 127830 123000 121380 82480 71628 89856 97960 109130 104980 99145 107100 103660 112310 119930 118770 123140 102590 103030 127520 117450 115360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133150000 30101 261 28273 56526;56527 45659 45659 1 9606 Homo sapiens 0.06089588767213172 VVDSLYNK Unmodified 936.49165 0.49164694 3207 O00231;O00231-2 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 6.5 0.5 1 1 50.693 50.772 3 0.0027891 13927 20230619_1887_Aki_TMTPro18x_K_F7 100.45 23.393 158430 111350 143620 174550 167140 193170 182360 167300 242700 142560 154360 160470 175810 136590 147930 177450 188980 162360 146250 102500 147690 171180 172360 193220 184720 172140 239990 146190 163490 161360 177440 143870 153330 176740 180230 154470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167420000 30102 3207 28274 56528;56529 45660 45660 1 9606 Homo sapiens 0.020860786605680914 VVDSMEDEVQR Oxidation (M) 1321.582 0.58199487 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2;K7ER16 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 1 0 1 0 1 37.371 37.371 2 5.9848E-05 8904 20230619_1880_Aki_TMTPro18x_K_F1 139.78 124.52 38480 24095 33910 38479 42287 41657 43317 42988 46684 49172 55322 60956 55600 45449 50824 54726 61959 59827 35495 22198 34977 37699 43258 41907 43722 43995 47725 49702 56404 60799 56503 47890 52399 55121 59160 56777 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65890000 30103 4109 28275 56530 45661 45661 2672 1 9606 Homo sapiens -0.06593284863993176 VVDSMEDEVQR Unmodified 1305.5871 0.58708025 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2;K7ER16 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 1 0 1 47.606 47.606 2 2.2034E-30 13347 20230619_1880_Aki_TMTPro18x_K_F1 275.33 259.45 118470 83914 102970 112060 105170 128120 118270 118280 140510 145530 158730 162180 166560 140570 137930 171770 168680 170430 109340 77098 105990 111040 109580 128060 119210 122240 142640 146120 162330 163170 168400 147360 142640 171940 161110 161880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 219340000 30104 4109 28275 56531 45662 45662 1 9606 Homo sapiens -0.05348981001361608 VVDSMEDEVQRR Oxidation (M) 1477.6831 0.6831059 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2;K7ER16 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 1 1 1.5 0.5 1 1 33.439 33.468 3 0.013394 7316 20230619_1880_Aki_TMTPro18x_K_F1 91.123 72.527 31143 25430 31723 31989 46451 37519 41877 38196 47539 35425 41563 39276 41792 36670 42367 40137 47792 38840 28801 23336 32386 31844 46851 37571 42642 38907 47838 36093 42928 39630 42689 38085 43354 40220 45613 36937 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55277000 30105 4109 28276 56532;56533 45663 45663 2672 1 9606 Homo sapiens -0.03662833161297385 VVDSMEDEVQRR Unmodified 1461.6882 0.68819127 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2;K7ER16 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 1 1.5 0.5 1 1 44.31 44.352 3 1.3817E-09 11828 20230619_1881_Aki_TMTPro18x_K_F2 170.23 155.54 240440 195680 229310 237090 253180 223750 256640 237460 256700 298700 319640 282450 290930 259300 289270 268530 317400 278830 222230 179500 234200 235920 260710 227790 258630 243360 264200 298010 323520 286700 297810 268720 295600 270390 303140 264870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 210720000 30106 4109 28276 56534;56535 45664 45664 1 9606 Homo sapiens -0.02418529298665817 VVDYSQFQESDDADEDYGR Unmodified 2236.9033 0.90326525 4497 Q9H1E3;B4DTY3;Q6IA16 NUCKS1;NUCKS Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes no 0 0 0 1 0 1 53.863 53.863 3 2.528E-07 15979 20230619_1880_Aki_TMTPro18x_K_F1 77.037 77.037 28177 26163 25934 27419 25305 31073 32247 29887 37236 30841 28979 33036 35504 29512 30722 36618 38293 37953 26059 23957 26539 27648 26554 31120 32252 30647 37313 31199 30436 33314 35811 30939 31773 36740 36563 36035 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18392000 30107 4497 28277 56536 45665 45665 1 9606 Homo sapiens -0.1657102560129715 VVDYTTAK Unmodified 895.4651 0.46509784 3725 Q5U0I6;P62820;B7Z8M7;E7END7;P62820-2;Q96RD8 RAB1A Ras-related protein Rab-1A yes no 0 0 0 7 0 1 45.415 45.501 2 0.0012494 11531 20230619_1887_Aki_TMTPro18x_K_F7 145.63 94.668 60250 38423 72174 81218 90913 110510 73316 93854 94520 56774 88476 107430 86573 82212 86281 54932 119170 113560 55726 35542 72665 78781 92564 109020 75665 96003 94700 60960 91112 105820 88500 84208 89368 59027 113660 107250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47834000 30108 3725 28278 56537 45666 45666 1 9606 Homo sapiens 0.013183897692215396 VVEDDEDDFPTTR Unmodified 1536.658 0.65799658 624 A0A2R8YFI2;A0A2R8YEA4;A0A2R8Y5H3;A0A2R8Y7Q9;A0A2R8YEK8;A0A2R8YE18;A0A2R8Y5S9;A0A024RAJ5;A0A2R8Y7C5;Q9Y5P4-2;Q9Y5P4;Q9Y5P4-3;A0A2U3TZL3;A0A2R8YE59 COL4A3BP Collagen type IV alpha-3-binding protein yes no 0 0 0 1 0 1 47.617 47.617 2 1.9809E-27 13341 20230619_1880_Aki_TMTPro18x_K_F1 247.79 241.26 42237 28330 31481 26333 24382 36933 25150 27825 31512 48386 53859 70958 62313 61790 39325 75770 81373 83404 38929 25949 32738 26926 26032 36332 25558 29599 32702 48465 54658 70670 62338 64731 42914 76227 77464 79129 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75652000 30109 624 28279 56538 45667 45667 1 9606 Homo sapiens -0.08886609482874519 VVEELTR Unmodified 844.46543 0.46543219 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;A0A7P0TB30;B4DSA8;B4DZP5;Q16531-2 DDB1 DNA damage-binding protein 1 yes no 0 0 0 3 0.816 1 1 1 45.22 45.288 2 0.0057715 11991 20230619_1882_Aki_TMTPro18x_K_F3 138.24 61.396 553420 433720 465430 536080 572680 568340 559000 544880 725460 596670 705880 635650 684230 540830 550700 756740 813160 673700 510920 398000 482070 533340 585980 571930 569470 559770 728360 601720 723480 640960 692700 572450 577910 751700 774520 641280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 612090000 30110 1710 28280 56539;56540;56541 45668 45668 1 9606 Homo sapiens 0.03697809489085557 VVEFSELDKPR Unmodified 1317.6929 0.69286595 4030 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 yes yes 0 0 1 6 0 1 50.843 50.92 3 0.048368 14317 20230619_1886_Aki_TMTPro18x_K_F6 49.978 34.777 66006 57105 64094 77200 58875 76467 71111 70314 93678 79387 79281 81456 82104 72534 80362 91675 83827 90103 61041 52432 65285 76268 62026 77198 71682 72526 93542 79850 82163 82308 83652 76114 82005 91697 80215 85574 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51076000 30111 4030 28281 56542 45669 45669 1 9606 Homo sapiens 0.04672722906411764 VVEGSFVYK Unmodified 1026.5386 0.53859714 1080 A0A0S2Z3X8;P31150;B4DHX4;B4DH24;G5E9U5 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 7.5 0.5 2 2 53.126 53.199 2;3 8.5666E-05 14896 20230619_1888_Aki_TMTPro18x_K_F8 175.44 141.26 516360 411940 452000 527180 396270 399680 456260 432950 452010 572780 606410 630070 603740 514870 563410 596570 618070 658460 476900 378120 464020 521230 417400 414790 456720 444130 467340 572780 615000 632920 614290 539290 576830 601580 591120 624600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1308900000 30112 1080 28282 56543;56544;56545;56546 45670;45671 45671 2 9606 Homo sapiens 0.026389382117031346 VVEHNIR Unmodified 865.477 0.47699993 1088 A0A0S2Z489;O00232-2;O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 4.5 0.5 1 1 29.08 29.152 2 0.032197 5429 20230619_1885_Aki_TMTPro18x_K_F5 94.262 63.593 15339 9513.2 16460 19941 26773 26089 20359 23860 25202 17450 27670 25665 23016 19023 20528 13079 27913 25248 14170 8799.8 16799 19336 26798 25850 21057 24349 25461 18237 28049 25453 23518 19544 21281 13946 26617 23861 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 11140000 30113 1088 28283 56547;56548 45672 45672 1 9606 Homo sapiens 0.0388805130307901 VVEIAPAAHLDPQLR Unmodified 1627.9046 0.90459006 332 A0A024R5C5;P11498;A0A494C101;A0A494C0T2;A0A494C016;P11498-2;E9PRE7 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 6.5 0.5 1 1 51.697 51.773 3 7.0893E-14 14657 20230619_1886_Aki_TMTPro18x_K_F6 170.49 152.69 184840 161080 183590 199500 174060 175100 200110 212120 230160 239150 269890 245950 256770 237520 244680 264870 292890 302640 170970 147760 186530 198050 182140 179830 201290 214860 234340 240410 274300 249220 262060 246730 251790 267790 279840 287020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 893100000 30114 332 28284 56549;56550 45673;45674 45673 2 9606 Homo sapiens 0.11575394597343802 VVEILHK Unmodified 836.51199 0.51198846 2541 Q6IA61;G3V4K3;B4DMB7;Q9H9C1-2;Q9H9C1;Q53H75 C14orf133;VIPAS39 Spermatogenesis-defective protein 39 homolog yes no 0 0 0 8 0 1 47.764 47.822 3 0.0018916 12595 20230619_1888_Aki_TMTPro18x_K_F8 119.21 62.108 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30115 2541 28285 56551 45675 45675 1 9606 Homo sapiens 0.08719294111040199 VVEIVDEK Unmodified 929.50696 0.50696266 4130 Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A8I5KSP1;A0A0B4J210;E5RH50;H0YBW1;H0YC73 LARP1 La-related protein 1 yes no 0 0 0 2.5 0.5 1 1 52.207 52.259 2 1.4975E-05 15138 20230619_1882_Aki_TMTPro18x_K_F3 143.01 83.805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30116 4130 28286 56552;56553 45676;45677 45677 2 9606 Homo sapiens 0.039389454577644756 VVEQLEK Unmodified 843.47018 0.47018322 2654 B4E357;Q5JPB8;Q53HL4;Q53GT4;G3V1D3;G3V180;Q9NY33-4;Q9NY33;E9PQ14 DKFZp686O1117;DPP3 Dipeptidyl peptidase 3 yes no 0 0 0 4 0 1 47.32 47.362 2 0.010873 12783 20230619_1883_Aki_TMTPro18x_K_F4 117.4 40.116 125950 72727 114650 127990 141960 156520 134300 143500 169580 159160 186780 213560 187720 158190 156570 133100 217560 226860 116160 67116 117890 124980 145180 155720 136980 147900 171420 161660 191000 212230 190110 163810 162980 139480 207640 214440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265400000 30117 2654 28287 56554 45678 45678 1 9606 Homo sapiens 0.04218693631867154 VVETDPSPYCIVAPDTVIHCEGEPIKR Unmodified 3080.4947 0.49470677 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;A0A7I2V2Y2;A0A7I2V5G8;Q9HAP1;A0A7P0T9X5;A0A7P0T8D6;A0A7P0T8Q4 VCP;HEL-S-70 Transitional endoplasmic reticulum ATPase yes no 0 0 1 5 0 1 55.11 55.178 4 5.6833E-06 15961 20230619_1885_Aki_TMTPro18x_K_F5 93.111 87.982 14037 9902.1 11202 13453 11484 15086 13049 12569 19319 17817 17508 17950 18653 15920 17671 21605 17066 19923 12947 9099.6 11636 13308 11987 15066 13256 13156 19252 17739 18100 18150 18954 16787 17976 21513 16354 18930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42688000 30118 3656 28288 56555 45679 45679 1 9606 Homo sapiens 0.037679206585835345 VVETEDAYK Unmodified 1052.5026 0.50260556 3926 Q15286;F5H157 RAB35 Ras-related protein Rab-35 yes no 0 0 0 3 0 1 45.034 45.106 2 0.00010125 11888 20230619_1882_Aki_TMTPro18x_K_F3 172.21 118.06 52754 35923 57828 64264 59673 75108 65903 64545 80423 78344 92154 93038 92505 77516 71729 62188 105790 99661 48768 33132 58404 62650 62081 74815 66548 67050 81555 78898 93986 93184 93425 79724 75120 64876 100850 94284 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39496000 30119 3926 28289 56556 45680 45680 1 9606 Homo sapiens -0.02154563755811978 VVEVGSK Unmodified 716.40685 0.40685468 3451;370 A0A024R5Z9;P14618-2;A0A804F6T5;A0A804F729;B4DRT3;H3BTN5;A0A8V8TMM5;A0A024R609;H3BQ34;V9HWB8;P14618;A0A8V8TNX9;B4DNK4;P14618-3 PKM2;PKM;HEL-S-30 Pyruvate kinase;Pyruvate kinase PKM no no 0 0 0 5.5 0.5 1 1 42.647 42.736 2 0.024608 10628 20230619_1886_Aki_TMTPro18x_K_F6 98.997 3.4552 165450 76965 214170 212010 341070 330720 249160 309570 239740 153600 291840 313080 214590 228380 280960 95170 301050 261090 152950 71689 215340 204290 341200 324680 256480 313340 246410 168450 293880 307520 224890 231240 284570 107730 287570 246380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 505580000 30120 370;3451 28290 56557;56558 45681 45681 1 9606 Homo sapiens 0.03730752914623281 VVEVLAGHGHLYSR Unmodified 1535.8209 0.82086043 3606 P49327;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 1.67 0.471 1 2 45.277 45.331 3;4 7.8473E-09 12267 20230619_1881_Aki_TMTPro18x_K_F2 157.82 119.24 224970 164210 242510 227880 225660 244810 241710 241480 254440 240880 264130 256060 270630 242640 256500 231840 292290 259160 208010 150920 244530 225150 236050 246160 243300 246930 258860 243970 270810 258790 275430 250150 262880 234810 279090 245980 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 556490000 30121 3606 28291 56559;56560;56561 45682;45683;45684 45684 3 9606 Homo sapiens 0.07438283220312769 VVFAELACR Unmodified 1063.5485 0.54845032 1296 Q2L6I2;A0A1U9X609;Q5STZ8;Q8NE71-2;Q8NE71;Q59F96;H0YGW7;A0A0G2JIC2 ABCF1 ATP-binding cassette sub-family F member 1 yes no 0 0 0 8 0 1 56.256 56.313 2 0.00057259 16236 20230619_1888_Aki_TMTPro18x_K_F8 131.03 62.082 147600 125940 143930 157390 128530 171220 157410 158720 182140 164650 157050 142640 178890 143390 156970 180770 168220 164480 136490 115540 146410 156530 135760 171720 157820 163170 183150 165480 163170 145930 180800 149910 160750 180080 160810 156410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109620000 30122 1296 28292 56562 45685 45685 1 9606 Homo sapiens 0.019218029454577845 VVFDSAQR Unmodified 920.47158 0.4715802 2754 C9JIF9;P13798;H7C1U0;H0YFE5 APEH Acylamino-acid-releasing enzyme yes no 0 0 0 6 0 1 42.331 42.425 2 0.033643 10464 20230619_1886_Aki_TMTPro18x_K_F6 78.728 60.325 92523 138580 97999 83387 107710 148570 98336 92849 125380 95293 109760 117170 98241 89736 111170 111440 161060 130700 86039 126270 99181 89792 111130 144130 100540 98755 125480 96951 112920 117020 101370 94604 115550 112710 153410 124050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 922160000 30123 2754 28293 56563 45686 45686 1 9606 Homo sapiens 0.00816327720622212 VVFEQTK Unmodified 849.45962 0.45961853 3674 V9HWK1;P60174;P60174-3;B4DUI5;Q53HE2;P60174-4;Q2QD09;U3KPZ0;U3KQF3 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 6.5 1.12 1 1 1 1 47.175 47.249 2 0.0062097 12678 20230619_1886_Aki_TMTPro18x_K_F6 143.11 76.849 4567000 3612800 3647400 4032300 4857500 5549100 4416600 4494200 6501400 4429200 5010100 4617700 4603800 4117900 4518500 5251300 5781100 4248300 4215100 3311900 3802200 4057400 4946000 5472200 4541300 4661300 6438900 4491400 5189500 4665900 4711400 4321300 4669400 5201300 5508500 4051300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3943399999.9999995 30124 3674 28294 56564;56565;56566;56567 45687;45688 45687 2 9606 Homo sapiens 0.02886710977418261 VVFQEFR Unmodified 923.4865 0.48650199 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1 MYH9 Myosin-9 yes no 0 0 0 7.5 0.5 1 1 52.782 52.855 2 0.0066915 14786 20230619_1888_Aki_TMTPro18x_K_F8 131.04 106.04 357030 331110 330250 341820 354130 433620 412690 422760 513490 252640 242860 216940 252260 192660 341460 259080 284460 188530 330210 303150 338240 345720 368050 431230 415610 427980 505780 263840 262380 221320 261350 203070 342000 255650 272050 180170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 435390000 30125 148 28295 56568;56569 45689 45689 1 9606 Homo sapiens 0.021698195886074245 VVFRDPYR Unmodified 1050.5611 0.56106391 3734 P62917;E9PKZ0;G3V1A1;B4DVG7;E9PKU4 RPL8 60S ribosomal protein L8 yes no 0 0 1 2.5 0.5 1 1 42.866 42.939 3 0.001616 10857 20230619_1882_Aki_TMTPro18x_K_F3 103.87 71.938 1052000 1005200 1072300 997170 1105100 1249200 1209900 1297100 1242500 520430 445850 341200 419030 330810 708910 537840 556500 333380 973930 919960 1087700 1012000 1148100 1245400 1214700 1300500 1230000 563130 493900 355450 442480 352490 706330 526300 532380 319630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1253400000 30126 3734 28296 56570;56571 45690;45691 45691 2 9606 Homo sapiens 0.03780582399986088 VVFVFGPDK Unmodified 1006.5488 0.54876789 3527 V9HWC7;P30041;A4UCS6 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 0 1.5 0.5 1 1 61.812 61.817 3 0.00037343 19402 20230619_1881_Aki_TMTPro18x_K_F2 99.136 80.356 192730 145920 136840 161450 198380 287810 197150 226250 338540 50432 42108 48748 54856 46333 101730 66978 61647 46314 177700 133780 144830 163380 202140 279790 202940 230520 324120 60971 57831 49662 57939 48933 100210 65938 59265 44265 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149900000 30127 3527 28297 56572;56573 45692 45692 1 9606 Homo sapiens 0.045755459369502205 VVFVFGPDKK Unmodified 1134.6437 0.64373091 3527 V9HWC7;P30041;A4UCS6 HEL-S-128m;PRDX6 Peroxiredoxin-6 yes no 0 0 1 3.5 0.5 1 1 56.458 56.48 3 0.00011667 16822 20230619_1883_Aki_TMTPro18x_K_F4 129.85 101.34 2353800 2080700 2168100 2231000 3028700 3614500 3206500 3118400 3337700 922810 821330 606880 702640 551600 2113300 643580 640120 571890 2176100 1905900 2232200 2259400 3084700 3537600 3223800 3160300 3285000 1045200 957970 630850 787440 576140 2034600 646060 626230 544200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1454700000 30128 3527 28298 56574;56575 45693;45694;45695 45695 3 9606 Homo sapiens 0.08179479408136103 VVGAMQLYSVDR Unmodified 1336.6809 0.68092105 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A087WX41;P53675-2;P53675 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 0 3.67 3.09 1 1 1 55.587 55.615 2 2.6274E-09 15964 20230619_1888_Aki_TMTPro18x_K_F8 179.31 146.89 249740 205460 251380 262560 204910 275230 248100 252430 295960 273080 228640 223960 269760 211200 277100 262840 240520 241720 230940 188570 254640 260620 218120 276700 249200 260010 296200 273460 239610 229140 274220 221120 279550 262190 230490 229810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 246270000 30129 826 28299 56576;56577;56578 45696;45697 45697 2 9606 Homo sapiens 0.02604782891580726 VVGAMQLYSVDR Oxidation (M) 1352.6758 0.67583567 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A087WX41;P53675-2;P53675 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 1 0 7 0 1 48.955 49.04 2 3.6199E-05 13178 20230619_1887_Aki_TMTPro18x_K_F7 131.5 97.298 70547 52336 62534 78371 72148 69754 76168 64385 80937 66568 71923 61769 64372 51091 69459 68071 56757 56959 65134 48138 64420 76839 74222 71073 76680 66277 81778 67045 73837 62608 66139 53956 69836 67523 54429 54217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90762000 30130 826 28299 56579 45698 45698 491 1 9606 Homo sapiens 0.013604790289718949 VVGAMQLYSVDRK Unmodified 1464.7759 0.77588407 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A087WX41;P53675-2;P53675 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 1 3.5 0.5 1 1 51.902 51.949 3 9.8675E-11 15016 20230619_1882_Aki_TMTPro18x_K_F3 170.95 153.28 825060 688300 766480 785870 671230 794090 758370 821500 856920 997180 887670 865220 978330 809530 861950 1141600 1091500 982180 762560 630980 782160 786070 707750 803090 763180 841800 869650 994040 913100 882820 990220 854460 892720 1132100 1041400 934970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 710900000 30131 826 28300 56580;56581 45699;45700 45699 2 9606 Homo sapiens 0.06208716362766609 VVGAQSLK Unmodified 800.4756 0.47560295 3630 P52209-2;P52209;B4E2U0;K7EM49;K7EMN2;K7EPF6 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 1.5 0.5 1 1 44.776 44.817 2 0.0015948 12073 20230619_1881_Aki_TMTPro18x_K_F2 153.71 49.502 262560 182450 234920 261130 427220 464080 314200 341810 461790 192290 211570 198280 211730 177740 293470 189860 249440 186850 242340 167780 243970 259660 425820 450910 327660 353400 451380 203190 228920 200500 220060 184670 293950 190800 238650 177730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 518280000 30132 3630 28301 56582;56583 45701 45701 1 9606 Homo sapiens 0.06738417214330639 VVGAVIDQGLITR Unmodified 1339.7823 0.78234966 1538 E9PLD3;A0A494BXY3;L0R588;E9PRG8 C11orf48;C11orf98 Uncharacterized protein C11orf98 yes no 0 0 0 1 0 1 59.028 59.028 3 2.6046E-06 18086 20230619_1880_Aki_TMTPro18x_K_F1 135.65 103.58 29834 23035 31174 37342 32269 38948 35981 38372 48947 37071 34458 35884 38145 33270 31565 38424 38169 39017 27587 21205 31616 36529 33575 39219 36459 39203 48528 37525 36199 36392 38521 34678 32616 38545 36462 37049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187480000 30133 1538 28302 56584 45702 45702 1 9606 Homo sapiens 0.1260497758580641 VVGCSCVVVK Unmodified 1105.5624 0.56238582 3501 P25398 RPS12 40S ribosomal protein S12 yes yes 0 0 0 1.5 0.5 2 2 47.533 47.57 2;3 1.5934E-06 13350 20230619_1880_Aki_TMTPro18x_K_F1 192.14 122.76 630210 532410 553760 524710 655560 715560 662560 669150 806910 532060 510590 447320 562060 431760 452610 658970 689040 474210 582270 487430 570250 533490 673390 708280 671880 682870 801410 543080 539540 458200 566970 457900 476270 647600 655500 453150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1718899999.9999998 30134 3501 28303 56585;56586;56587;56588 45703;45704 45703 2 9606 Homo sapiens 0.013827123822238718 VVGDVAYDEAK Unmodified 1164.5663 0.56626845 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A8V8TL46;A0A8V8TMA9 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 2.5 0.5 1 1 49.022 49.094 3 0.00045916 13722 20230619_1882_Aki_TMTPro18x_K_F3 96.113 72.364 478520 398230 469660 516290 666590 598750 590820 506820 721330 722690 847420 807340 887870 701410 718560 817640 1005600 1013400 442450 365530 480920 512610 673870 597500 603940 530160 732610 721580 864790 812310 896690 733740 750010 830360 959410 960470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1179200000 30135 2973 28304 56589;56590 45705 45705 1 9606 Homo sapiens -0.009432033187067645 VVGICGTHEK Unmodified 1098.5492 0.5491786 4240 V9HW32;Q8N8N7;G3V2R9 HEL-S-298;PTGR2 Prostaglandin reductase 2 yes no 0 0 0 7 0 1 39.036 39.1 3 1.5611E-07 8869 20230619_1887_Aki_TMTPro18x_K_F7 166.55 122.24 89491 69001 84271 89354 104620 97411 90123 100370 120060 93546 110120 105820 109970 92105 112440 116670 124630 103710 82680 63353 86342 88674 106590 97997 92664 102120 120140 95323 113420 106480 112370 96733 114980 116130 118980 98715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83783000 30136 4240 28305 56591 45706 45706 1 9606 Homo sapiens 0.003845975945068858 VVGLLAGTLGVAQHR Unmodified 1489.8729 0.872896 2393 B3KRB8;Q9BQC3-3;Q9BQC3;H0YCR5 DPH2 Diphthamide biosynthesis protein 2 yes no 0 0 0 7 0 1 60.88 60.922 3 8.7313E-14 18179 20230619_1887_Aki_TMTPro18x_K_F7 168.76 149.18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30137 2393 28306 56592 45707 45707 1 9606 Homo sapiens 0.14755446634103464 VVGNPCPICR Unmodified 1170.5638 0.5637828 1298 B0S7P4;A0A1U9X819;Q9Y676;B4DFG6 MRPS18B 28S ribosomal protein S18b, mitochondrial yes no 0 0 0 3.67 3.09 1 1 1 41.397 41.436 2 9.3101E-05 10727 20230619_1880_Aki_TMTPro18x_K_F1 176.41 155.51 81424 65908 79623 78528 109270 122240 96814 91078 117760 93890 92972 96964 105240 92924 89673 104450 128070 109910 75272 60451 81477 78828 110870 119580 98945 95257 117780 94927 97112 98162 106360 96594 93647 105050 122040 104400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69869000 30138 1298 28307 56593;56594;56595 45708;45709;45710 45708 3 9606 Homo sapiens -0.01467653528993651 VVGPQQLHSETNER Unmodified 1592.7907 0.79068251 4426 Q9BSF4 C19orf52 Uncharacterized protein C19orf52 yes yes 0 0 0 3 0 1 36.197 36.252 3 1.2823E-08 8120 20230619_1882_Aki_TMTPro18x_K_F3 119.96 99.01 27584 24581 25986 25234 28400 33130 29150 31288 35854 32469 39436 36435 39148 32343 30156 34196 41345 35694 25508 22508 26564 25551 29356 32865 29566 32109 36272 32879 40245 36682 39537 33600 31460 34411 39412 33907 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34085000 30139 4426 28308 56596 45711 45711 1 9606 Homo sapiens 0.017998797644622755 VVGQTTPESFEK Unmodified 1320.6561 0.65614609 3790;4031 Q5CZB5;Q02952-3;Q02952-2;Q02952 DKFZp686M0430;AKAP12 A-kinase anchor protein 12 no no 0 0 0 4.5 0.5 1 1 48.9 48.957 2 2.1751E-06 13315 20230619_1885_Aki_TMTPro18x_K_F5 167.6 120.4 20021 13754 22229 17372 17013 19627 17033 17146 19647 25540 29425 36238 30672 21938 30738 31608 29722 35268 18511 12631 22286 17287 18089 19620 17281 17917 20279 25665 29835 35792 31232 23627 31206 31808 28486 33439 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46586000 30140 4031;3790 28309 56597;56598 45712 45712 1 9606 Homo sapiens 0.008644262898542365 VVGSEFVQK Unmodified 991.53385 0.53384611 2016 A8K2M0;P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 7.5 0.5 2 2 50.045 50.124 2;3 4.1137E-05 13577 20230619_1888_Aki_TMTPro18x_K_F8 122.18 67.4 305570 238330 259210 307680 303440 356300 327990 308610 387020 360350 377010 365030 403660 317020 327630 417300 399360 390580 282110 218800 268170 305540 312700 355430 331010 320020 390530 361660 388290 368880 407410 333990 338940 415980 381350 371290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 414880000 30141 2016 28310 56599;56600;56601;56602 45713;45714 45714 2 9606 Homo sapiens 0.03774054068958321 VVGSELIQK Unmodified 971.56515 0.56514624 3706 Q53XL8;Q53HB3;P62191;P62191-2 PSMC1 26S protease regulatory subunit 4 yes no 0 0 0 7.5 0.5 1 1 51.517 51.594 2 1.36E-06 14328 20230619_1887_Aki_TMTPro18x_K_F7 152.47 60.026 189980 155620 160100 194710 184760 224360 216950 209390 245510 231100 222830 216950 255720 191850 197370 273270 245260 225880 175440 142800 165750 193760 191070 224210 217680 215530 247620 232010 231030 220150 257050 203090 204780 270430 234070 215120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191680000 30142 3706 28311 56603;56604 45715;45716 45715 2 9606 Homo sapiens 0.07822627103053037 VVGVLLGSWQK Unmodified 1184.6917 0.69174374 2310 B2RD27;P51665;H3BNT7;H3BTM8 PSMD7 26S proteasome non-ATPase regulatory subunit 7 yes no 0 0 0 6 0 1 63.524 63.572 3 0.0023101 19734 20230619_1886_Aki_TMTPro18x_K_F6 78.098 43.566 93848 87343 97734 97637 92483 107660 99636 99555 119050 95232 90833 91144 102810 76757 104910 102630 103790 109450 86883 80023 98881 97924 96728 107930 100660 102160 119020 96399 95077 92247 104580 81092 106560 103100 99355 103860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48070000 30143 2310 28312 56605 45717 45717 1 9606 Homo sapiens 0.10678553328170892 VVHIIQAR Unmodified 934.57123 0.57123467 730 P25440-2;P25440;P25440-3;A0A0G2JK44;A0A140T9E9;H0Y6K2;A0A024RCR5;X5CF57;A0A1U9X7A8;P25440-4;A0A1U9X7B8;A0A1U9X7B4;A0A1U9X7B3;A0A140T9I1;A0A0G2JHN8 BRD2 Bromodomain-containing protein 2 yes no 0 0 0 3.5 0.5 1 1 38.428 38.476 3 1.0112E-05 8964 20230619_1882_Aki_TMTPro18x_K_F3 164.89 139.16 48514 38007 44926 41993 34019 39522 42120 44793 43057 48195 56126 59697 60780 50063 51372 71053 66404 61084 44821 34839 45751 42084 36435 40284 42073 45491 44343 48849 57194 59792 61438 53048 53341 70447 63353 58143 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56775000 30144 730 28313 56606;56607 45718 45718 1 9606 Homo sapiens 0.10133190125225155 VVHIIQSR Unmodified 950.56615 0.56614929 517;3288 O60885;A0A024R7H8;O60885-2;O60885-3;Q58F21-5;Q58F21-4;Q58F21;Q58F21-3;Q58F21-2;A0A024R8H6;Q15059;B4DS09 BRD4;BRDT;BRD3 Bromodomain-containing protein 4;Bromodomain testis-specific protein;Bromodomain-containing protein 3 no no 0 0 0 3 0 1 37.796 37.849 3 0.00023612 8704 20230619_1882_Aki_TMTPro18x_K_F3 155 131.64 76044 51039 62936 62988 71803 83246 67870 66308 99448 77016 94046 73773 89751 74117 72729 92058 71891 67347 70137 46866 65153 62889 73905 82244 69631 69188 99215 77250 96380 75165 90900 77363 74319 90797 68761 64245 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 260470000 30145 3288;517 28314 56608 45719 45719 1 9606 Homo sapiens 0.08888886262616325 VVHIMDFQR Unmodified 1143.5859 0.58589846 1059 P43243;A8MXP9;A0A0R4J2E8;Q68D11;D6REM6;D6R991;H0Y8T4;P43243-2;B4DRS1;B3KM87;Q5CZA7;B4DF66;D6RE02;D6RBI2;D6RAY2;D6RAM9;D6RIA2 MATR3;DKFZp686K23100;DKFZp686K0542 Matrin-3 yes no 0 0 0 4.5 3.5 1 1 47.983 48.012 3 2.1027E-06 13534 20230619_1880_Aki_TMTPro18x_K_F1 178.94 158.07 147580 144840 134230 136650 179740 260520 176910 189610 267690 19313 17031 17807 22482 23198 57686 25067 29443 19258 136530 132490 138260 140330 183720 252250 181120 193940 256760 29155 29582 18497 24588 23824 56294 24946 28374 18390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 571160000 30146 1059 28315 56609;56610 45720;45721 45720 2 9606 Homo sapiens 0.019848942110456846 VVHSYEELEENYTR Unmodified 1766.8111 0.81114318 332 A0A024R5C5;P11498;A0A494C101;A0A494C0T2;A0A494C016;P11498-2;E9PRE7 PC Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 2 0 1 48.417 48.482 3 2.1097E-16 13765 20230619_1881_Aki_TMTPro18x_K_F2 166.03 139.9 149150 80836 142070 139420 139650 130800 161020 147470 171300 175360 171050 159590 170540 151220 156400 199300 172500 171530 137570 74603 144830 135840 145630 133290 161430 150290 173980 175240 175410 162530 173450 158750 160420 197830 164880 163220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232530000 30147 332 28316 56611 45722 45722 1 9606 Homo sapiens -0.041589943663439044 VVIFQQEQENK Unmodified 1360.6987 0.69867961 1204 A0A140VJT0;P63151;P63151-2;Q56VW8;E5RIY1 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B yes no 0 0 0 5.33 0.471 2 1 52.022 52.097 2;3 1.8142E-39 14657 20230619_1885_Aki_TMTPro18x_K_F5 302.25 198.05 252960 194890 211250 232890 224870 265880 242240 233790 286140 257960 278450 277720 286030 251040 278820 302330 284420 275130 233500 178800 218410 232500 233270 265610 244590 241750 288650 260110 286410 280210 291390 262450 284090 301430 272010 261640 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 496290000 30148 1204 28317 56612;56613;56614 45723;45724;45725 45724 3 9606 Homo sapiens 0.03275821418083069 VVIGMDVAASEFFR Oxidation (M) 1555.7705 0.77046434 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2 ENO1 Alpha-enolase;Enolase yes no 0 1 0 7 0.816 1 1 1 62.063 62.101 2 2.291E-09 18732 20230619_1887_Aki_TMTPro18x_K_F7 168.69 125.17 813470 597640 623460 935040 893730 725890 815250 778550 837380 807890 1055900 949200 931630 813040 927610 1035500 894490 1046400 750260 550030 654720 912970 903140 751500 827220 793250 860210 819120 1067000 953520 954490 854730 942200 1037300 857210 993240 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2010799999.9999998 30149 293 28318 56615;56616;56617 45726;45727;45728 45726 181 3 9606 Homo sapiens 0.014809927802389211 VVIGMDVAASEFFR Unmodified 1539.7755 0.77554972 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2 ENO1 Alpha-enolase;Enolase yes no 0 0 0 7.5 0.5 1 1 64.574 64.599 2 1.5625999999999998E-21 19779 20230619_1888_Aki_TMTPro18x_K_F8 257.8 229.59 111730 79205 96340 116930 90197 96927 115110 103910 96950 119210 144260 132600 139730 126330 121560 146360 135170 158440 103110 72854 99181 114670 94790 99671 114090 106170 101710 120020 145500 133890 141910 131560 124830 147360 129350 150270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239650000 30150 293 28318 56618;56619 45729 45729 1 9606 Homo sapiens 0.027252966428704894 VVIIDEAHER Unmodified 1179.6248 0.62478638 2975 F5H3Y4;Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 yes no 0 0 0 2.5 0.5 1 1 41.353 41.421 3 3.3682E-06 10472 20230619_1881_Aki_TMTPro18x_K_F2 164.66 139.28 45164 33123 40596 45808 36379 44103 48575 44536 57954 44176 46862 44165 39871 41818 46232 43559 54281 41051 41700 30440 41596 45185 38499 44717 48543 45482 58004 44697 48293 44764 41289 43265 47323 43624 51767 39065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82646000 30151 2975 28319 56620;56621 45730 45730 1 9606 Homo sapiens 0.04215898046413713 VVIIGAGK Unmodified 755.49052 0.49052473 3900;2497;4425 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2;Q9BS14 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 3 0 1 50.834 50.904 2 0.0075396 14523 20230619_1882_Aki_TMTPro18x_K_F3 122.15 66.128 1015500 771250 872890 935750 886660 1110500 1061100 1029800 1416800 1093000 1230900 1406100 1459100 1341300 1057100 1785700 1853600 2023200 937470 707690 899400 933810 926560 1107500 1070400 1059500 1414700 1111800 1282300 1411900 1464700 1409000 1130100 1798100 1767000 1918500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 393100000 30152 3900;2497;4425 28320 56622 45731 45731 1 9606 Homo sapiens 0.10299909082323211 VVIIGAGKPAAVVLQTK Unmodified 1663.0396 0.039626976 3900;2497;4425 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2;Q9BS14 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 1 6 0 1 58.476 58.541 3 1.5188E-13 17549 20230619_1886_Aki_TMTPro18x_K_F6 159.69 156.37 133660 130580 130110 146230 135480 148930 165190 165900 158290 163910 167340 155370 131040 102150 188210 115400 107860 93780 123710 119620 132670 146480 141030 150820 164640 168250 162010 165390 169730 156240 137430 107830 185540 114820 103880 89353 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3790299999.9999995 30153 3900;2497;4425 28321 56623 45732 45732 1 9606 Homo sapiens 0.23462874739107065 VVIPPSFAYGK Unmodified 1176.6543 0.6542956 4754 Q9Y680-3;Q9Y680;B4DRE2;A0A8I5KRR8;D3DPF8;Q9Y680-1;H7BZJ4 FKBP7 Peptidyl-prolyl cis-trans isomerase FKBP7;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 4 0 2 59.882 59.884 3 1.1445E-06 18267 20230619_1883_Aki_TMTPro18x_K_F4 135.86 127.64 30861 27974 32375 31790 34168 33571 36970 38378 38683 33553 39000 38658 36998 37770 40352 43070 42427 46017 28567 25636 32782 31835 35381 33939 37177 38742 39302 34327 39923 39010 38030 39243 41105 43354 40599 43663 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56745000 30154 4754 28322 56624;56625 45733;45734 45733 2 9606 Homo sapiens 0.073034620625549 VVIQEMLK Unmodified 958.55214 0.55213871 770 Q5U0C2;Q53HK8;A0A024RDQ8;P40938;B4DKE6;P40938-2 RFC3 Replication factor C subunit 3 yes no 0 0 0 8 0 1 59.376 59.418 3 0.007469 17562 20230619_1888_Aki_TMTPro18x_K_F8 83.265 34.761 25085 24615 39744 36684 35531 43135 35824 34285 48079 41569 45291 43863 44881 37926 39000 44063 50936 48117 23336 22617 39075 36126 37259 42904 36497 35841 48156 41717 46562 44226 45551 39650 40446 44394 48600 45669 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8010200 30155 770 28323 56626 45735 45735 1 9606 Homo sapiens 0.07120472719304871 VVIQSNDDIASR Unmodified 1315.6732 0.67319314 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;A0A994J583;A0A994J7K1 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 0 3 0 1 43.83 43.899 2 1.1674E-12 11294 20230619_1882_Aki_TMTPro18x_K_F3 201.84 181.54 43637 34107 38695 46190 47226 48070 51684 42108 49701 54740 62562 60126 61289 54838 54344 66450 71038 68111 40301 31329 39893 45656 48460 48338 51774 43808 51272 54811 63511 60640 62292 57343 56369 66647 67787 64685 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73106000 30156 1867 28324 56627 45736 45736 1 9606 Homo sapiens 0.02798346895656323 VVIVDPETGK Unmodified 1055.5863 0.58627561 3921 Q15149;Q15149-2;A0A8I5KSD5;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-4;Q15149-3;A0A8I5KYZ1;E9PMV1;A0A8I5KUE3;H0YDN1;D3DWL0;Q96IE3 PLEC;PLEC1 Plectin yes no 0 0 0 5 0 1 51.914 51.988 3 0.021399 14604 20230619_1885_Aki_TMTPro18x_K_F5 61.161 44.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30157 3921 28325 56628 45737 45737 1 9606 Homo sapiens 0.06070592411901998 VVIYHLR Unmodified 898.53887 0.53887191 4195 Q86WQ0;Q86WQ0-2 NR2C2AP Nuclear receptor 2C2-associated protein yes no 0 0 0 3 0 1 42.565 42.631 3 0.0134 10735 20230619_1882_Aki_TMTPro18x_K_F3 86.113 39.046 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30158 4195 28326 56629 45738 45738 1 9606 Homo sapiens 0.08554402722211307 VVLAEVIQAFSAPENAVR Unmodified 1912.0418 0.04181182 4404 Q99622;F5GXW5;U3KQ07 C12orf57 Protein C10 yes no 0 0 0 2.5 0.5 1 1 66.616 66.638 3 5.612299999999999E-19 21447 20230619_1881_Aki_TMTPro18x_K_F2 185.74 168.25 5760.7 5305 5112 4663.3 5878.3 4932.5 5513.5 6287.3 6239.8 5836.6 4286.9 3476.1 5636.7 6068.2 4972.3 5772.7 5527.1 5752.3 5326 4851.1 5253.3 4774.1 6025.4 5006.9 5604.6 6312.1 6243.9 5853.2 4544.8 3728.1 5688.8 6155.8 5102.8 5803.1 5284.5 5463 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52340000 30159 4404 28327 56630;56631 45739 45739 1 9606 Homo sapiens 0.12227258686289133 VVLAPQDVVVAR Unmodified 1264.7503 0.75032125 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-5;Q13308-3;Q59FV9;Q86X91;B7Z471 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 7.5 0.5 1 1 54.043 54.112 2 1.4743E-12 15311 20230619_1888_Aki_TMTPro18x_K_F8 230.66 175.06 168740 141760 173190 167900 158380 184680 183890 175560 198040 218400 216260 254810 234800 202720 245450 230770 226120 255790 156080 129990 175320 167690 166420 185280 184420 181170 201820 219470 222180 255070 239530 212310 248270 232920 216750 242580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 211550000 30160 3847 28328 56632;56633 45740;45741 45741 2 9606 Homo sapiens 0.12853609902640528 VVLASQPDLECGFSR Unmodified 1676.8192 0.81920545 395 A0A024R6H0;Q9P2I0;B3KMI0;B3KN45 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 yes no 0 0 0 6 0 1 56.256 56.33 3 3.0032E-08 16620 20230619_1886_Aki_TMTPro18x_K_F6 110.44 107.52 61950 49174 61799 60442 49094 73789 60648 65825 73642 74594 66991 69276 73272 62359 78941 72086 60347 69564 57272 45120 62612 60296 52484 73367 60917 68004 74055 74760 69362 70310 74828 65072 79113 72174 57983 66065 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 332620000 30161 395 28329 56634 45742 45742 1 9606 Homo sapiens 0.007868613493656085 VVLAYEPVWAIGTGK Unmodified 1601.8817 0.88172935 3674 V9HWK1;P60174;P60174-3;B4DUI5;Q53HE2;P60174-4;Q2QD09;U3KPZ0;U3KQF3 HEL-S-49;TPI1 Triosephosphate isomerase yes no 0 0 0 3 0 1 63.869 63.9 2 8.3629E-20 20066 20230619_1882_Aki_TMTPro18x_K_F3 236.11 205.95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30162 3674 28330 56635 45743 45743 1 9606 Homo sapiens 0.10486375479877097 VVLDDKDYFLFR Unmodified 1528.7926 0.79257999 1453 A0A384N6A4;P61604;Q9UNM1;A0A024R3X7;B8ZZ54 HSPE1;EPFP1 10 kDa heat shock protein, mitochondrial yes no 0 0 1 4.5 3.04 1 1 1 1 61.85 61.87 3 1.587E-09 18515 20230619_1888_Aki_TMTPro18x_K_F8 170.66 150.98 2829800 2995300 3599600 3329300 1787300 2631300 3993600 3479400 1696900 3451800 3253100 1448300 1573100 900500 4952600 741770 798560 517790 2627300 2743000 3565500 3328800 2055300 2732600 3830300 3496300 1924100 3422400 3186400 1543800 1810400 942330 4724200 749540 802270 495210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2798700000 30163 1453 28331 56636;56637;56638;56639 45744;45745;45746 45746 3 9606 Homo sapiens 0.04933540520346469 VVLDNIHGCPLR Unmodified 1391.7344 0.73435361 273 B3KMB8;A0A024R3X5;Q9NYY8-2;Q9NYY8 FASTKD2 FAST kinase domain-containing protein 2 yes no 0 0 0 8 0 1 46.227 46.265 3 2.1644E-05 12027 20230619_1888_Aki_TMTPro18x_K_F8 122.39 111.23 78510 66138 85443 89615 81710 100300 85181 100320 103450 107450 103510 94958 121270 89098 105540 121570 103280 101800 72662 60734 86195 88702 85348 100560 86320 102610 104420 107820 106910 96838 122350 93866 107560 120490 98828 96907 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120010000 30164 273 28332 56640 45747 45747 1 9606 Homo sapiens 0.05415580394083008 VVLEAPDETTLK Unmodified 1313.7078 0.70784731 4105 Q6GMV3 PTRHD1 Putative peptidyl-tRNA hydrolase PTRHD1 yes yes 0 0 0 4.5 0.5 1 1 55.518 55.556 3 0.0062879 16082 20230619_1885_Aki_TMTPro18x_K_F5 69.864 36.917 63628 45290 63452 62809 66114 78001 74109 76279 91108 82103 84041 86515 94318 87669 85385 97685 92892 96290 58786 41628 64519 62186 68737 77649 74787 78177 91562 82833 87027 87686 95570 90888 87466 97899 88830 91459 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163730000 30165 4105 28333 56641;56642 45748 45748 1 9606 Homo sapiens 0.0635416998375149 VVLEHEEVR Unmodified 1108.5877 0.58767259 4753 Q9Y678;B3KW21;Q8WUI6 COPG1;COPG Coatomer subunit gamma-1 yes no 0 0 0 1.5 0.5 1 1 37.129 37.159 3 1.4309E-12 8561 20230619_1881_Aki_TMTPro18x_K_F2 199.89 181.11 261420 192860 244970 270340 289070 318030 305590 293480 340480 326800 337160 332120 372500 301630 324120 396590 386660 363430 241450 177260 251050 267170 297250 317340 308200 302420 344820 328710 347590 336050 376720 317190 334280 394950 369190 345630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 436020000 30166 4753 28334 56643;56644 45749;45750 45750 2 9606 Homo sapiens 0.037722265006550515 VVLENEAVR Unmodified 1027.5662 0.56620887 1219 A0A140VK12;Q9UBF2;Q9H9B7;Q9UBF2-2;B3KND4;Q9NUP3 COPG2 Coatomer subunit gamma-2;Coatomer subunit gamma yes no 0 0 0 3 0 1 43.773 43.843 2 0.0077387 11291 20230619_1882_Aki_TMTPro18x_K_F3 89.247 39.434 90022 78180 86742 83640 91061 110170 109030 90344 118670 103810 114590 121780 121840 96311 115170 123980 133890 128230 83248 71617 88462 84398 94802 108940 109130 94073 120140 104780 118140 121950 123780 101680 118300 124350 127890 121760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39424000 30167 1219 28335 56645 45751 45751 1 9606 Homo sapiens 0.05352841471949432 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR Unmodified 3046.5247 0.52474457 3857 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 yes yes 0 0 0 1 0 1 62.956 62.956 4 0.0716 19699 20230619_1880_Aki_TMTPro18x_K_F1 39.143 35.036 6784.3 5904 6762.4 6411.1 5710.4 9606.1 6323 8989.1 10388 9448.6 9277.3 11180 10570 8731.4 10060 10553 11703 11868 6275.5 5409 6856.7 6478.1 6066 9448.7 6473.3 9226.5 10308 9577.5 9639.7 11182 10724 9185.9 10332 10648 11182 11257 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14078000 30168 3857 28336 56646 45752 45752 1 9606 Homo sapiens 0.08334318919651196 VVLGTAAFSK Unmodified 991.57023 0.57023162 2992 F8W8C1;Q6ZTA4;Q6ZTA4-2 TRIM67 Tripartite motif-containing protein 67 yes no 0 0 0 4 0 1 55.633 55.641 3 0.0011456 16505 20230619_1883_Aki_TMTPro18x_K_F4 77.379 64.179 67682 56752 64927 76942 71214 82328 87987 80945 104780 85639 91398 88532 85767 80813 91635 93889 92605 107780 62572 52115 66373 76087 73971 82785 88215 82940 105180 86434 94159 89508 88053 84298 93150 94909 88699 102170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96876000 30169 2992 28337 56647 45753 45753 1 9606 Homo sapiens 0.0741093096565919 VVLIGDSGVGK Unmodified 1042.6023 0.60226003 369;3946 H3BSC1;A0A024R5Z8;P62491;H3BMH2;P62491-2;Q15907-2;B4DMN1;B4DQU5;Q15907 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B no no 0 0 0 7.5 0.5 1 1 54.309 54.377 2 1.014E-08 15425 20230619_1888_Aki_TMTPro18x_K_F8 213.53 39.126 424840 370200 385700 406380 375930 431990 415670 401720 444570 507460 527060 532550 545380 479210 482050 614030 534610 566830 392700 339200 395040 407900 392540 434320 417850 415390 454870 507870 537700 537830 553130 503040 494950 611850 511220 538760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 366150000 30170 369;3946 28338 56648;56649 45754;45755 45755 2 9606 Homo sapiens 0.08266298648823067 VVLIGGKPDR Unmodified 1052.6342 0.63422886 1865 P61978-3;A0A994J4E9;B4DUQ1;A0A994J6U9;P61978-2;Q5EC54;A0A994J4S7;P61978;B4DFF1;A0A994J4U9;A0A024R228;A0A994J782;Q5T6W2;A0A994J6T5 HNRNPK;HNRPK Heterogeneous nuclear ribonucleoprotein K yes no 0 0 1 3 0.816 1 1 1 45.292 45.359 3 0.000222 11957 20230619_1882_Aki_TMTPro18x_K_F3 120.45 104.88 1685800 1220000 1342800 1390000 1595800 1847200 1729100 1722700 1908400 1924100 1726500 1833900 2289900 1781100 1476100 2294300 2193400 1967700 1555100 1119000 1396900 1396200 1642800 1830300 1740900 1773300 1928400 1931300 1804500 1864400 2280200 1866500 1559300 2276700 2090100 1873200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 7674799999.999999 30171 1865 28339 56650;56651;56652 45756;45757;45758 45757 3 9606 Homo sapiens 0.11001711122594315 VVLLAEGR Unmodified 855.5178 0.51780212 86 A0A024R0A8;O43865;Q2NKW8;V5YQL4;O43865-2;Q9BTL0;O43210 AHCYL1;FGFR2-AHCYL1 Adenosylhomocysteinase;Putative adenosylhomocysteinase 2 yes no 0 0 0 7 0 1 49.845 49.926 2 0.0022296 13568 20230619_1887_Aki_TMTPro18x_K_F7 130.04 72.937 95627 73727 85103 92295 104230 119790 124050 108900 131150 92157 99567 83700 88105 80075 104370 86805 93297 80304 88311 67668 87689 92031 107330 118760 124050 111580 131790 93869 103080 85298 91093 83052 105130 86834 89283 76390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64592000 30172 86 28340 56653 45759 45759 1 9606 Homo sapiens 0.084263926227095 VVLLGEGCVGK Unmodified 1129.6165 0.61652988 658 Q9UL25;A0A024RBA9 RAB21 Ras-related protein Rab-21 yes no 0 0 0 8 0 1 55.645 55.707 3 0.0021497 16016 20230619_1888_Aki_TMTPro18x_K_F8 79.659 53.057 88496 74186 85723 89006 71040 82747 89075 89777 102590 105020 98142 94569 114640 94131 89868 122990 120870 112270 81821 68039 87114 88616 75487 84315 89214 91644 103620 105010 101580 96515 115310 98654 93709 122430 115290 106780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99066000 30173 658 28341 56654 45760 45760 1 9606 Homo sapiens 0.05690627805438453 VVLLHGPPGTGK Unmodified 1173.687 0.68699271 3937 Q15645;H0YAL2 TRIP13 Pachytene checkpoint protein 2 homolog yes no 0 0 0 3.5 0.5 1 1 46.894 46.955 3 2.0082E-05 12739 20230619_1882_Aki_TMTPro18x_K_F3 124.12 98.23 105060 88956 102690 110550 101890 116950 112160 118200 126450 113290 106450 104120 119270 99519 127540 128120 116510 111100 97153 81611 104550 109960 106220 117790 112960 120510 127230 114500 110760 106020 121700 104310 128940 127350 111550 105730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 348250000 30174 3937 28342 56655;56656 45761 45761 1 9606 Homo sapiens 0.10709669185393977 VVLLTEVDK Unmodified 1014.5961 0.59611202 770 Q5U0C2;Q53HK8;A0A024RDQ8;P40938;B4DKE6;P40938-2 RFC3 Replication factor C subunit 3 yes no 0 0 0 6 0 1 58.694 58.76 2 1.0675E-05 17607 20230619_1886_Aki_TMTPro18x_K_F6 172.21 122.8 125580 107030 108030 117280 108590 143840 123840 116460 146560 157900 148050 147950 163790 128240 127870 169560 168040 165880 116020 98071 111300 117950 113420 142790 124680 121980 148180 157070 152480 149980 164920 135180 133100 169390 160380 157600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42870000 30175 770 28343 56657 45762 45762 1 9606 Homo sapiens 0.08939780417279053 VVLLTGETSTDLK Unmodified 1374.7606 0.76061116 3312 O75643;A4FU77 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 7 0 1 58.644 58.693 3 0.00055722 17272 20230619_1887_Aki_TMTPro18x_K_F7 101.33 83.595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30176 3312 28344 56658 45763 45763 1 9606 Homo sapiens 0.08822128046563193 VVLPCSVQEYQVGQLYSVAEASK Unmodified 2553.2785 0.27848963 3601 P48739;P48739-2;P48739-3;B2R7P6;B3KYB7 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 0 0 1 0 1 63.256 63.256 4 2.1594E-08 19822 20230619_1880_Aki_TMTPro18x_K_F1 109.05 100.55 16411 12401 17565 17441 13247 14206 16418 19067 20018 21381 21250 21604 22859 24376 17788 26619 19902 28908 15176 11397 17680 17162 14184 14720 16498 19199 20247 21489 21811 22025 23071 25155 18347 26815 19084 27399 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77498000 30177 3601 28345 56659 45764 45764 1 9606 Homo sapiens 0.06398152606971053 VVLPIEAPIR Unmodified 1105.6859 0.68593008 1057 A0A0P0C1B5;Q4GCC3;W8DBX9;A0A345WIR4;A0A343GID2;A0A343GG78;A0A343GUB7;A0A059RJF0;A0A059RKP1;A0A059RIQ8;A0A7T4WPY7;A0A342Y881;A0A059R1T0;A0A345ALL9;A0A343GQG5;A0A343YTG0;A0A343YSM3;A0A343YS86;A0A343VHA3;A0A343VD86;A0A343VB45;A0A343V3Y6;A0A059RQ10;A0A343GQY4;A0A059RX67;A0A059RLH3;G9LG51;G9LB98;I2E7Z7;G8JE99;A0A343R0H2;A0A343R0G0;G8JF18;A0A343LIL8;A0A059RKX5;A0A059RNF8;A0A343GRT3;A0A343L1C9;A0A343H8S5;A0A059RIZ2;A0A343H8N6;A0A343H6K8;A0A343GTX4;A0A059RNV8;A0A343GT12;A0A059RPV8;A0A343UGE8;A0A343UE68;A0A343UAQ9;A0A143FZ56;A0A1J0QNY7;A0A1J0QL53;A0A1J0PNZ2;A0A1I9S095;A0A0R6NEC0;A0A1B1PEN9;A0A1B0W3A7;F1AZF2;A0A1B0W1P0;A0A0D4WSL8;A0A343SU82;A0A1B0W0T5;A0A0D4WR75;A0A342YMQ1;A0A343FXU3;A0A343FX71;A0A059RR09;A0A059RRG1;A0A059RSL1;A0A059RTZ6;A0A1L7NY43;A0A0N6YNR7;A0A1S6M799;A0A1V0MCS7;A0A059RFY4;A0A343SEV6;A0A343RU73;A0A343R0N9;A0A059RHR2;A0A059RHY7;A0A059RI53;A0A343GG65;A0A343GFQ9;A0A343GB60;A0A059RQT0;A0A0E3JG40;A0A342Y6A5;A0A342YA83;A0A342Y5A4;A0A059RVU8;A0A342DHX4;A0A0E3JSF1;A0A1W6ER68;Q305H0;P00403;Q0Z7J0;W8DFH5;U3L556;U5Z487;Q5SB08;H9T3W9;H9SA70;X5C6M5;X5BKA4;X2CK15;X2C841;W8D4U9;I6N6Q6;W8D1X2;V9K571;V9JPM6;V9JD22;V9J3S1;U5Z9R9;U3LSI8;Q5SAP1;Q5SA98;T1SWS8;Q6R0V6;Q6RKW8;Q6RNN7;T1Q632;S4STI1;R9Y478;R9Y412;Q9B2U8;Q9B138;Q8WCW3;Q8HNR6;Q8HNR1;Q85KS0;Q7YEH2;Q7YCE6;Q7Y6N0;Q7Y6M3;Q7Y626;Q6VJJ3;Q6VJD8;Q6VIG7;Q6RQ80;Q5S971;I3Q4M2;K7X9X2;I6UIH6;Q4GQP0;Q4GHE1;Q4GCZ4;Q4GCG2;Q4F4V6;Q4EZD4;H9RV93;Q15HH9;Q0Z7S0;Q0Z7K3;I3PYD8;Q0Z7F1;Q0Z7D8;Q09U41;Q06TE6;N0BMC4;L7XQ86;L7XMG0;L7NVC9;K9M370;Q4GVP5;J7FG21;I6PZI4;H9RA87;H9S868;Q19MP7;H9RKS9;H9RJL3;H9RF01;H9RD12;I6PRP7;H9RAX1;H9QLC8;H9QH59;H9Q9T5;H9PMX8;H9PDV6;H9MK30;H9M675;H9LMC2;H9E7D1;G9LKX8;G9LHJ5;A0A342LG30;A0A346LZU9;A0A059RZV1;A0A059QPR4;A0A3S9JHN1;A0A3S9JHM1;A0A346M047;A0A3Q8UG27;A0A3Q8A5Z2;A0A218N9E7;A0A143G082;E5EWG2;A0A059QQA7;A0A6B7Q1T4;A6ZF47;A0A6B9Q7Z4;E7E4E0;A0A6B9RA68;A0A3S9JI82;A0A410RF05;A0A4D6CUW3;A0A4D6FL11;A0A4D6FNQ5;A0A4D6FST5;A0A5P9RNX7;A0A649YE60;A0A649YEF8;A0A649YEQ1;A0A649YES9;A0A6B7PVN7;A0A6B7PYH4;A0A6B7Q1E7;A6ZEU4;A6ZFK3;A0A059QI72;A6Z3M5;A1Z455;A0SA07;A0A6G9L5D8;A0A1B1PEQ8;A0A346LZY3;H9E7P8;A0A8A9WMX6;H9E7W2;A0A343GQC6;H9E7T7;A0A059QPT6;A0A059S242;H9E7F7;A0A7G4BTR8;A0A346M0E0;A0A6B9RCS6;A0A6B9RFD0;A0A6H0MSY6;A0S3T1;A0A6H0MV09;A0A6H0MWV7;A0A7D5PJ23;A0A7D5U3G9;A0A3S8PQC9;A0A7G4BHA1;A0A7T4WPA6;A0A7T0Q5U3;A0A346LZT8;A0A6B9R926;A0A8A6VHT6;A0A8A6VIW3;A0A059QPE9;A0A8F5ZDB1;E5E1A6;A7LF11;E5EWL4;C5H6M7;D1G421;C8YBL1;C8Y3Q5;C8Y3G4;C8XWJ6;C5H6M8;C5H6M5;B2XL43;C5H6M4;C5H6M3;C5H6L3;B5M7M0;B3GUF3;E5EWR3;D2IKF4;A0A346M081;A0A059QVH0;A0A059QTW9;A0A342YDT1;A0A342YTK5;A0A0D4WQL7;A0A343E1A9;A0A0D3MLN1;A0A343E4Y3;A0A343E999;A0A343ECF4;A0A097Q0T5;A0A097PWY7;A0A097PWR7;A0A068IXK4;A0A068BY99;B3DE06;A0A059SAH5;B2XIR3;F2WI31;B2XHT9;G5D8C8;G5D863;G4W3U1;G4W3M6;F2WJ84;F1CIN6;A0A023QZ25;G5D8Q5;Q14XT3;F1AZ87;E7CNQ9;A0A3Q8UFB0;E5FWC0;G5D8J3;A0A346M077;G5D8K6;B1W855;E5E079;B2WRY8;A0A1B1LLS4;E5DZN4;A0A059QS59;A0A059QLX8;E2JFC4;B2CB37;G5D8N2;A7LFA2;E2DTL8;G3CA49;A0A7D5PKH7;A0A6B9RAE1;A0A0B5E697;A0A1L1ZJP0;A0A059S8A4;X2D4D6;A0A059QNV4;A0A3Q9X1I8;A0A3Q9WXG2;X2D546;X2D4V3;X2D3Z7;X2D4V5;X2D4U5;X2D4U2;X2D4K6;X2D544;X2D3Z6;X2D4F2;X2D3Z8;X2D4E2;A0A3Q9X1R8;A0A3Q9WYE7;A0A3Q9X065;A0A3T1BA63;A0A059RUZ1;A0A1B0W1E4;A0A410RF02;A0A8A0WQ04;A0A059RRR2;A0A8A0WR66;A0A059RTG7;A0A059RUP9;A0A059S2S6;A0A8A0WQF7;A0A059QM31;A0A344AJB0;A0A343GRX2;A0A059RQQ2;K7WG81;K7WVJ5;A0A059QPE7;A0A059QPU3;A0A059QPY9;A0A059RI85;A0A059RMK0;A0A059RP05;A0A059RQI1;D3WYY8;A0A649YFA6;A0A059RIK5;Q4GW12;A6ZHA9;A0A1S6N0P5;A0A1V0MD25;A0A343GRJ2;A0A343LEZ9;A0A343SU56;A0A649YFC1;A0A6G7GCJ6;A0S2P1;B2XP28;J7HPF9;C5H6K5;C5H6K6;E0AF97;E5E1V1;E7CM18;E9P659;H9STE0;X2D537;F2WGV2;A0A343FU81;A0A343SQK0;A0A343E934;A6YW54;V9J128;V9J3C6;Q5XRW8;B2YKU2;C5H6K7;H9PWQ9;H9S054;A0A343UCM2;H9S5Y2;A0A343GM19;A0A344AK34;A0A344AK06;A0A493QZL5 COII;COX2;MT-CO2;cox2 Cytochrome c oxidase subunit 2 yes no 0 0 0 3.67 3.09 1 1 1 59.03 59.049 2 9.4233E-07 18095 20230619_1880_Aki_TMTPro18x_K_F1 180.54 134.51 620380 607090 646240 777930 814160 957500 1004000 1008600 935930 563230 635570 560570 726550 620500 686980 642530 627540 578570 574550 556860 658010 773800 837360 955310 998670 1014800 944070 593570 670000 572130 736790 639170 695700 642050 600660 550390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2771500000 30178 1057 28346 56660;56661;56662 45765;45766 45765 2 9606 Homo sapiens 0.13731454816502264 VVLPTFILEK Unmodified 1157.706 0.70599682 1195 A0A140VJQ6;Q9BXB4;Q9GZM0;A0A5F9ZH75;Q59ED9;H7C487;Q9NX98;B3KUL5;Q9BXB5-2;Q9BXB5 OSBPL11;OSBPL10 Oxysterol-binding protein-related protein 11;Oxysterol-binding protein;Oxysterol-binding protein-related protein 10 yes no 0 0 0 3 0 1 64.034 64.065 3 0.0031606 20139 20230619_1882_Aki_TMTPro18x_K_F3 85.355 55.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30179 1195 28347 56663 45767 45767 1 9606 Homo sapiens 0.13345205756468204 VVLPTFILER Unmodified 1185.7121 0.71214483 2193 B3KW33;B7Z4Q6;B1AKJ6;Q96SU4-5;Q96SU4-4;Q96SU4-3;Q96SU4-7;Q96SU4-2;Q96SU4;Q96SU4-6 OSBPL9 Oxysterol-binding protein;Oxysterol-binding protein-related protein 9 yes no 0 0 0 3 0 1 63.476 63.507 2 0.0067073 19894 20230619_1882_Aki_TMTPro18x_K_F3 101.9 56.584 91589 69678 89441 84319 69865 87935 81692 80151 86708 82112 84417 85270 85387 85634 113130 87204 88233 97475 84636 63934 90712 84023 74524 88450 81891 82497 87953 83001 86846 86434 88497 88365 113040 88276 84726 92440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116880000 30180 2193 28348 56664 45768 45768 1 9606 Homo sapiens 0.12671723987978112 VVLQELR Unmodified 855.5178 0.51780212 1895;3100 A0M8W4;Q15819;G3V113;Q13404-8;I3L0A0;Q13404;Q13404-7;Q13404-2;Q13404-1;G3V2F7;Q13404-6 UBE2V2;UBE2V1;TMEM189-UBE2V1 Ubiquitin-conjugating enzyme E2 variant 2;Ubiquitin-conjugating enzyme E2 variant 1 no no 0 0 0 6 0 1 49.139 49.216 2 0.015939 13537 20230619_1886_Aki_TMTPro18x_K_F6 110.61 39.234 294390 210120 265570 321350 270530 462340 339260 336980 468720 277010 278190 274720 259530 239080 304700 318720 315590 306600 271770 193350 272830 316880 284050 453290 341860 351280 461880 283630 293630 277960 267880 251910 309730 318280 301780 291370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 410900000 30181 1895;3100 28349 56665 45769 45769 1 9606 Homo sapiens 0.08426392622698131 VVLQELRR Unmodified 1011.6189 0.61891314 1895;3100 A0M8W4;Q15819;G3V113;Q13404-8;I3L0A0;Q13404;Q13404-7;Q13404-2;Q13404-1;G3V2F7;Q13404-6 UBE2V2;UBE2V1;TMEM189-UBE2V1 Ubiquitin-conjugating enzyme E2 variant 2;Ubiquitin-conjugating enzyme E2 variant 1 no no 0 0 1 2.5 0.5 1 1 42.928 43.002 3 0.00082394 11202 20230619_1881_Aki_TMTPro18x_K_F2 125.49 77.894 200360 153380 175750 185030 192550 203660 200270 208130 224930 211250 198810 189660 216720 178120 206960 241220 217830 194150 185000 140730 180880 184550 198890 204670 202270 212350 226770 212690 205970 193250 220140 187430 211410 238670 208150 184990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 169740000 30182 1895;3100 28350 56666;56667 45770;45771 45770 2 9606 Homo sapiens 0.11356844325405291 VVLTDPEAAK Unmodified 1041.5706 0.57062555 792 B7Z6S9;A0A068F579;A0A068F658;A0A0G2JLB3;B2R6A7;D3DV87;B7Z7G9;A0A0G2JNZ5;P04062-4;P04062-2;P04062;A0A068FB60;B7Z6E6;A0A223PQI4;B7Z731;A0A0G2JNZ0;P04062-5;A0A068F4C8;A0A068F753;B4DHT6;B3KQW3;B4DMV8;A0A068F661;P04062-3 GBA Glucosylceramidase yes no 0 0 0 4 0 1 49.914 49.948 2 0.00019339 13980 20230619_1883_Aki_TMTPro18x_K_F4 158.76 111.67 51184 39012 42823 63705 63702 74186 78166 71329 80538 66423 76104 76339 72223 64000 69838 73073 77798 80507 47244 35918 44667 62370 64934 74102 77981 72958 81671 67715 78133 76643 73747 66898 71516 73696 74379 76377 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31459000 30183 792 28351 56668 45772 45772 1 9606 Homo sapiens 0.05150305894835583 VVLVLAGR Unmodified 825.54362 0.54362294 166 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7EQQ9;K7ERY7 RPL27 60S ribosomal protein L27 yes no 0 0 0 5 0.816 1 1 1 54.542 54.595 2 0.010234 16040 20230619_1883_Aki_TMTPro18x_K_F4 99.384 54.439 542580 516810 457510 424740 606360 783330 655290 633350 868080 168040 136780 133540 139140 122820 284070 157070 185520 132250 501580 472320 474130 441700 620820 761390 663580 644690 840860 195210 175170 137190 149180 128830 280150 156320 178090 126070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1296600000 30184 166 28352 56669;56670;56671 45773;45774 45773 2 9606 Homo sapiens 0.1238728686498689 VVLVTGAGAGLGR Unmodified 1168.6928 0.69280637 1097 P51659;A0A0S2Z4J1;B2R659;E7EPL9;A0A804HK65;A0A2R8YD50;B4DDM5;A0A804HKU2;E7ER27;A0A804HIR1;A0A2R8YF45;A0A2R8YDT8;A0A2R8YEG2;A0A0S2Z460;A0A804HKT2;A0A0S2Z4Q6;A0A804HLJ0 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes no 0 0 0 5 0.816 1 1 1 52.3 52.358 2 2.3102E-07 14777 20230619_1885_Aki_TMTPro18x_K_F5 153.7 85.317 134140 119230 136840 133710 109930 124640 128590 127180 162660 202890 226680 246660 248680 197930 186610 239180 259900 281400 124130 109260 138340 133800 116890 126840 129730 131820 166470 202240 230560 246680 250090 208060 195180 241880 248110 266750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 286290000 30185 1097 28353 56672;56673;56674 45775;45776 45776 2 9606 Homo sapiens 0.11520767697106749 VVNDEEVVR Unmodified 1057.5404 0.54038805 3315 O75691 UTP20 Small subunit processome component 20 homolog yes yes 0 0 0 1 0 1 40.294 40.294 2 0.0033156 10225 20230619_1880_Aki_TMTPro18x_K_F1 98.233 78.446 69799 41645 70113 68748 85026 80494 71205 77278 101560 71375 85420 84165 85508 73585 76087 87344 112520 94867 64434 38391 71385 67327 86717 80425 73551 78996 101010 72904 88377 84548 86880 76982 79598 87939 107190 90090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64970000 30186 3315 28354 56675 45777 45777 1 9606 Homo sapiens 0.01391947229649304 VVNGPEILNK Unmodified 1081.6132 0.61315906 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;A0A994J5C5;A0A994J855;A0A994J5Y2;A0A994J7T3 NSF Vesicle-fusing ATPase yes no 0 0 0 8 0 1 52.03 52.107 2 0.00018431 14434 20230619_1888_Aki_TMTPro18x_K_F8 122.26 80.274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30187 1435 28355 56676 45778 45778 1 9606 Homo sapiens 0.0756170102310989 VVNIDTNSLR Unmodified 1129.6091 0.60913632 2002 B4DYS9;B4DYT5;Q0IIN7;Q569F6;A8K0W8;Q59EE8;Q9Y6Q9-4;Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9 NCOA3 Nuclear receptor coactivator 3 yes no 0 0 0 7 0 1 48.407 48.494 2 0.0069663 12922 20230619_1887_Aki_TMTPro18x_K_F7 85.744 37.9 72837 54409 71784 67621 70354 69850 80693 74124 69301 75169 76990 66231 66505 53360 81990 67781 72878 66593 67305 49940 72955 67263 73360 70586 80426 75472 71577 75603 78148 67233 68906 56254 82517 67865 69774 63286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 39177000 30188 2002 28356 56677 45779 45779 1 9606 Homo sapiens 0.04951611529349975 VVNIVPVIAK Unmodified 1050.6801 0.68011642 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;A0A0S2Z5W9;Q9UHD8-4;Q9UHD8-8;Q9UHD8-9;A0A6Q8PHC2;K7EL40;K7EK18 SEPT9 Septin-9 yes no 0 0 0 5 0 1 61.039 61.089 3 0.06809 18349 20230619_1885_Aki_TMTPro18x_K_F5 52.79 52.79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30189 541 28357 56678 45780 45780 1 9606 Homo sapiens 0.15680356304824272 VVNLGVLAQK Unmodified 1039.639 0.63897988 962 A0A0A0MTB8;Q8NI36 WDR36 WD repeat-containing protein 36 yes no 0 0 0 4 0 1 58.551 58.553 2 1.267E-11 17718 20230619_1883_Aki_TMTPro18x_K_F4 206.09 145.61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30190 962 28358 56679 45781 45781 1 9606 Homo sapiens 0.12074595265357857 VVNLPLVSSTYDLMSSAYLSTK Unmodified 2387.2294 0.22941417 4102 Q6FHZ7;Q99541;B4DNH6;Q5SYF3;Q5SYF5;Q5SYF4 ADFP;PLIN2 Perilipin;Perilipin-2 yes no 0 0 0 5 0 1 66.608 66.651 4 0.022276 20843 20230619_1885_Aki_TMTPro18x_K_F5 47.814 38.65 4856.1 3529.6 3366.7 4744.4 3451.7 3961.2 3641.6 5355.9 4509.4 4616.6 4383.7 4408.2 4766.7 4943.1 6134.7 5511.7 5136.5 6216.5 4475.8 3242.7 3552.9 4680.3 3590.4 4095.4 3692.4 5351.1 4542.2 4697.1 4524.3 4505.5 4923.2 5109.2 6156 5571 4931.7 5893 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4401800 30191 4102 28359 56680 45782 45782 1 9606 Homo sapiens 0.09128864318017804 VVNPLFEK Unmodified 944.53312 0.53311783 3722 P62424;Q5T8U3 RPL7A 60S ribosomal protein L7a yes no 0 0 0 4.5 3.5 1 1 56.452 56.452 2;3 0.00025826 17050 20230619_1880_Aki_TMTPro18x_K_F1 168.08 12.263 473160 406050 415000 480380 405480 504700 491630 493690 624300 481720 451630 449940 537290 458670 441040 696390 552140 675150 437210 372320 426760 479350 425030 508160 494670 504820 621310 486900 475160 459110 541330 485450 457780 693890 528060 641040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 460640000 30192 3722 28360 56681;56682 45783;45784 45783 2 9606 Homo sapiens 0.058632594199025334 VVNPTQA Unmodified 727.38645 0.38645359 2785 CON__P34955 yes yes 0 0 0 3.5 0.5 1 1 42.268 42.322 2 0.059654 10557 20230619_1883_Aki_TMTPro18x_K_F4 81.864 56.306 + 55424 51979 58402 52841 115100 130190 72348 72787 120230 56831 66134 59873 57518 57172 68606 49059 67894 59959 51319 47583 59896 54283 114040 124460 76835 77831 117450 58591 69986 60566 59586 58615 69415 50116 64912 56863 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88235000 30193 2785 28361 56683;56684 45785 45785 1 0.011855822548000106 VVNSILAFR Unmodified 1017.5971 0.59711507 1264 A0A1B0GU86;V9HWA0;B4DNW0;C9JMV9;Q03154-2;Q03154-4;Q03154;A0A1B0GW23;A0A1B0GV31;B4DPC3;A0A1B0GVA5 HEL-S-5;ABHD14A-ACY1;ACY1 Aminoacylase-1 yes no 0 0 0 5 0 1 60.687 60.737 2 0.0020758 18204 20230619_1885_Aki_TMTPro18x_K_F5 126.24 109.54 82659 71492 70238 79078 70347 79896 88802 91048 104400 97898 74907 68449 81397 70095 95432 99181 89117 82712 76365 65511 72450 79283 73618 81002 88926 92396 104340 97685 78531 70917 83558 73793 96466 98270 85283 78758 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28567000 30194 1264 28362 56685 45786 45786 1 9606 Homo sapiens 0.08902039576855714 VVNTQCGYDVR Unmodified 1309.6085 0.60848439 1966 H7BXY6;A6NEP9;Q8NG11-3;Q8NG11-2;Q8NG11 TSPAN14 Tetraspanin;Tetraspanin-14 yes no 0 0 0 6 0 1 40.973 41.067 2 5.4395E-05 9986 20230619_1886_Aki_TMTPro18x_K_F6 141.88 124.78 22225 15749 16403 14505 21277 25279 19967 21731 26523 23966 24461 24465 29067 20441 23927 27916 31658 25677 20489 14421 17210 14908 21722 24667 20411 22484 26571 24124 25391 24685 29256 21630 24866 27796 30174 24434 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27750000 30195 1966 28363 56686 45787 45787 1 9606 Homo sapiens -0.033935511820118336 VVNVANVGAVPSGQDNIHR Unmodified 1945.013 0.012971308 1129 O00203;O00203-3;A0A0S2Z5J4;A8K586;A0A8Q3WKJ9;A0A8Q3SIS1;A0A8Q3SHS3;A0A8Q3WKK0;A0A8Q3SHW6;A0A8Q3SHR2;A0A8Q3SHS6;H0YBD0 AP3B1 AP-3 complex subunit beta-1;AP-3 complex subunit beta yes no 0 0 0 8 0 1 45.839 45.878 3 1.8615E-31 11809 20230619_1888_Aki_TMTPro18x_K_F8 234.36 218.22 15966 9994.5 16073 20070 21318 20721 18549 17581 19809 18283 19421 19196 18485 14390 18539 21614 19053 17230 14743 9238.1 16417 19422 21630 20823 18902 18207 20097 18469 19905 19292 18889 15381 18896 21350 18212 16418 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162950000 30196 1129 28364 56687 45788 45788 1 9606 Homo sapiens 0.07826534109835848 VVPCLVTPVTGR Unmodified 1296.7224 0.72239194 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 4 0 1 55.032 55.044 2 0.00054372 16270 20230619_1883_Aki_TMTPro18x_K_F4 104.05 86.184 40373 31545 35735 47400 37149 40950 38635 39313 39332 47680 48510 50602 52385 43582 47119 51507 50254 53942 37285 29010 36775 46445 38521 41849 38911 40521 40443 47808 49526 50990 53079 45615 48205 51758 48078 51195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24219000 30197 3299 28365 56688 45789 45789 1 9606 Homo sapiens 0.08589963650911159 VVPDPNVIK Unmodified 979.57023 0.57023162 3102 Q9NUU7;I3L0H8;Q9UMR2;Q9UMR2-4;Q9UMR2-2;A0A0U4B4U6;F6QDS0;H3BQK0;Q53G16;Q7Z4W5;Q9HBZ9;Q2NL95;B4DS24;Q69YM2;I3L352;Q68DY7;B4DL69;A0A024QZ90;Q59FQ9;Q9UMR2-3;Q9NUU7-2 DDX19A;DDX19B;DKFZp762C1313;DKFZp686C21137;hCG_1998531 ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B yes no 0 0 0 7.5 0.5 1 1 51.708 51.784 2 0.00057174 14376 20230619_1887_Aki_TMTPro18x_K_F7 131.06 91.017 232610 198040 180270 270560 245020 280060 241790 242120 284860 222400 219480 186130 240460 168330 210440 240900 223300 208370 214740 181860 189010 267160 249560 281520 245210 249510 285060 224870 228950 190220 243110 178220 215390 239010 213430 198310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232470000 30198 3102 28366 56689;56690 45790 45790 1 9606 Homo sapiens 0.07962930965652504 VVPEMTEILK Unmodified 1157.6366 0.63659662 1075 P13804;A0A0S2Z3L0;A0A0S2Z3M4;P13804-2;H0YLU7;A0A8I5KVL5;A0A8I5KYH4;A0A8I5KYP7;A0A8I5KT03;A0A8I5KUR2;H0YK49;H0YL83 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes no 0 0 0 7 0 1 61.871 61.91 3 0.0026719 18670 20230619_1887_Aki_TMTPro18x_K_F7 79.974 46.013 71127 49488 66622 77666 50378 79268 79971 82522 80525 85748 90795 99620 92936 82783 90780 100060 100830 117400 65673 45558 67915 76098 54585 80004 78959 84172 82411 86876 92844 99920 94712 86866 92961 101210 96489 111270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201860000 30199 1075 28367 56691 45791 45791 1 9606 Homo sapiens 0.06408378745391019 VVPGYGHAVLR Unmodified 1166.656 0.65602693 651 O75390;A0A024RB75;B4DJV2;B3KTN4;A0A0C4DGI3;H0YIC4;Q0QEL2 CS Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 3.5 0.5 1 1 41.641 41.693 3 4.251E-13 10293 20230619_1882_Aki_TMTPro18x_K_F3 214.93 157.91 279390 185460 301500 316940 416500 391300 370850 393740 401010 287440 353670 339250 338430 306970 347910 283490 387300 315400 258210 170960 306190 310060 421670 390020 377520 399130 404580 297920 364410 341050 346520 316390 355390 287330 369680 299490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1368500000 30200 651 28368 56692;56693 45792;45793;45794 45793 3 9606 Homo sapiens 0.07936515871188021 VVPIASLTPYQSK Unmodified 1401.7868 0.78676633 3514 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes yes 0 0 0 4 0 1 59.377 59.379 3 0.00010881 18092 20230619_1883_Aki_TMTPro18x_K_F4 99.5 87.634 27418 29669 32088 34897 29172 27020 36812 30506 36622 31454 37000 28294 44116 43754 36407 41875 47003 41317 25439 27183 32179 34719 30670 28025 36660 30984 37313 31674 38197 29452 44485 44502 37767 42070 44830 39270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 275250000 30201 3514 28369 56694 45795 45795 1 9606 Homo sapiens 0.10194442008719307 VVPLHSLK Unmodified 891.55419 0.55418762 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 3.5 0.5 1 1 45.283 45.343 3 0.00016442 11997 20230619_1882_Aki_TMTPro18x_K_F3 160.75 103.19 203270 146450 184160 182480 177960 246270 261270 224330 314200 131650 156830 133920 141890 121250 165520 149870 190570 147940 187670 134440 188690 182170 188050 243490 259960 228280 310060 138470 167580 135640 146540 127000 169170 150100 181800 140690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167770000 30202 3598 28370 56695;56696 45796 45796 1 9606 Homo sapiens 0.1040726951941906 VVPSDLYPLVLGFLR Unmodified 1686.9709 0.97087871 3905 Q14978-3;B2RAU8;A0A0A0MRM9;Q14978;Q14978-2;S4R349;S4R341;S4R402 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 0 0 0 6 0 1 67.652 67.695 3 0.00070445 21372 20230619_1886_Aki_TMTPro18x_K_F6 80.96 75.994 4455.7 3166.9 4078 4300.3 2882.6 4122.2 4251 4678.7 2957.5 2307 5378.9 3204.7 3425.3 5429.5 4275 3072.8 4263.6 3508.6 4113.8 2910.1 4158.6 4247.7 3129.9 4190.5 4172.4 4678.5 3171.1 2488 5306.6 3300.2 3613.5 5391.1 4324.7 3156.5 4074.2 3330.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13190000 30203 3905 28371 56697 45797 45797 1 9606 Homo sapiens 0.15487210439368937 VVPTTDHIDTEK Unmodified 1353.6776 0.67760981 3313 O75663;O75663-2 TIPRL TIP41-like protein yes no 0 0 0 3.5 0.5 1 1 42.811 42.866 3 4.5502E-07 10856 20230619_1882_Aki_TMTPro18x_K_F3 153.11 138.08 190120 162700 187510 196090 203740 215680 218400 199470 281460 201230 231050 251190 255000 221050 253440 281470 288740 273350 175830 149220 190990 195560 210760 216280 221220 205050 280890 204990 240660 251810 259530 232130 259840 281350 275820 259770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 432020000 30204 3313 28372 56698;56699 45798;45799 45798 2 9606 Homo sapiens 0.014918113185785842 VVQCHSQGGLR Unmodified 1239.6142 0.61423847 2132 B3KP95;A8K948;Q9NVH0-2;Q9NVH0 EXD2 Exonuclease 3'-5' domain-containing protein 2 yes no 0 0 0 4.5 3.5 1 1 30.088 30.096 3 2.889E-10 5679 20230619_1888_Aki_TMTPro18x_K_F8 193.21 131.86 23245 14629 20955 20808 28998 24484 24786 31412 28252 21676 31357 30442 26370 22977 28328 17335 33322 30182 21445 13458 21587 20562 29320 24646 25362 31327 28675 22686 31806 30248 27170 23661 28982 18268 31812 28543 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27778000 30205 2132 28373 56700;56701 45800;45801 45801 2 9606 Homo sapiens 0.004015921203517792 VVQHLGPATDFYK Unmodified 1473.7616 0.76161421 2588 B4E2E1;B4DTM6;O95487-2;O95487;O95487-3 SEC24B Protein transport protein Sec24B yes no 0 0 0 1 0 1 50.614 50.614 3 0.0015754 14595 20230619_1880_Aki_TMTPro18x_K_F1 77.776 56.218 65901 61971 68835 74376 86172 100830 78957 80536 110950 81992 81275 76179 77118 68147 80467 84159 86126 93223 61016 56813 69982 74422 88038 99472 80995 83694 109970 82696 84573 77353 79038 71424 82101 84807 82400 88421 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74532000 30206 2588 28374 56702 45802 45802 1 9606 Homo sapiens 0.04368387206113766 VVQHSNVVINLIGR Unmodified 1546.8944 0.89435972 1508 Q9BTT5;A0A3B3ISG8;Q16795;A8K4V2 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 5.5 0.5 1 1 50.702 50.778 3 2.1389E-05 14117 20230619_1885_Aki_TMTPro18x_K_F5 112.42 87.727 44237 37188 40231 45799 76392 72708 98587 96702 112940 42137 55469 52132 53378 45873 57089 52961 52981 53115 40881 34115 41816 45922 76990 72023 98413 95621 111670 45910 59524 52344 54747 47889 57738 53135 50732 50447 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 328600000 30207 1508 28375 56703;56704 45803 45803 1 9606 Homo sapiens 0.1427883166279571 VVQSLEQTAR Unmodified 1129.6091 0.60913632 2916 E9PGT1;Q15631;H7C1D4;Q53GR3;Q15631-2;A0A0J9YVW2 TSN Translin yes no 0 0 0 5.5 0.5 1 1 46.028 46.11 2 2.0207E-13 12148 20230619_1886_Aki_TMTPro18x_K_F6 219.8 167.55 187700 123660 156910 192060 196330 297900 214750 203260 357760 235170 256950 317310 316720 286730 215660 375810 410530 445580 173120 113850 162890 189480 202320 290700 219660 215070 351970 238890 271220 317410 316970 301480 232710 379560 391150 422350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 487240000 30208 2916 28376 56705;56706 45804;45805 45805 2 9606 Homo sapiens 0.049516115293727125 VVQVSAGDSHTAALTDDGR Unmodified 1897.913 0.91298249 1074 Q5T081;A0A0S2Z3I4;A0A0S2Z404;P18754;P18754-2;C9JW69;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4 RCC1 Regulator of chromosome condensation yes no 0 0 0 4 0.816 1 1 1 41.959 42.022 3 4.6582E-86 10449 20230619_1882_Aki_TMTPro18x_K_F3 346.14 327.68 93446 80368 80366 98734 105970 117220 98715 109870 108450 117210 111360 109630 114680 98276 93123 116050 122900 124000 86334 73719 83221 98418 107890 116960 100280 112900 110150 117810 114230 111250 115940 102710 96842 116710 117310 117680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 304060000 30209 1074 28377 56707;56708;56709 45806;45807 45806 2 9606 Homo sapiens -5.74801463244512E-05 VVQVVKPHTPLIR Unmodified 1484.9191 0.91911791 3762 P82909 MRPS36 28S ribosomal protein S36, mitochondrial yes yes 0 0 1 6.5 0.5 1 1 45.639 45.726 4 1.7564E-10 11973 20230619_1886_Aki_TMTPro18x_K_F6 174.46 124.17 87023 123110 99889 108580 105230 133250 122870 117580 124190 104240 106060 79710 96170 75896 109700 86670 114000 61156 80932 112450 100570 111260 109420 132560 122890 120840 125660 105370 109100 81987 99081 78994 111400 85597 108670 58550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 124000000 30210 3762 28378 56710;56711 45808 45808 1 9606 Homo sapiens 0.1960551153617871 VVSAAVQAQHSATK Unmodified 1395.747 0.74702678 1761 A0A8I5KY07;A0A8I5KRP1;A0A8I5KRK1;A0A8I5KYQ0;A0A8I5KZB3;Q9H2M9;A0A8I5QJC9;A0A8I5KSQ5;A0A8I5KWJ9;B3KNG8 RAB3GAP2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 2 0 1 41.092 41.169 3 2.9161E-13 10336 20230619_1881_Aki_TMTPro18x_K_F2 166.65 148.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30211 1761 28379 56712 45809 45809 1 9606 Homo sapiens 0.06498315057979198 VVSAFLK Unmodified 762.46398 0.46397563 162 A0A024R1U0;P46060;B4DY16;B4E0U0;Q9BSK3 RANGAP1 Ran GTPase-activating protein 1 yes no 0 0 0 3.5 0.5 1 1 57.514 57.532 2 0.0075423 17283 20230619_1883_Aki_TMTPro18x_K_F4 124.37 49.063 271520 235580 224330 240230 277930 386350 292250 290580 414230 87418 72839 50465 65820 54256 168930 82845 85595 58742 250800 215710 232830 244160 285810 377200 297260 297970 400400 98857 90546 53322 72404 57362 164880 81722 82517 56147 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 148100000 30212 162 28380 56713;56714 45810 45810 1 9606 Homo sapiens 0.07324220190992037 VVSDVLK Unmodified 758.4538 0.45380487 4744 Q9Y586;F1T0A2;B2R805;Q13394 MAB21L2;MAB21L1 Protein mab-21-like 2;Protein mab-21-like 1 yes no 0 0 0 6.5 0.5 1 1 50.651 50.73 2 0.0074614 13914 20230619_1887_Aki_TMTPro18x_K_F7 134.12 48.235 907070 764450 859380 774160 691910 737890 773680 783450 957190 790840 964810 818740 758360 686090 1002500 873550 1008800 760170 838530 700030 873740 781390 734350 750520 781550 797570 964020 799930 979920 826200 792490 721590 1014700 869010 963470 724130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 398530000 30213 4744 28381 56715;56716 45811;45812 45812 2 9606 Homo sapiens 0.06491612465765684 VVSEDFLQDVSASTK Unmodified 1623.7992 0.79918151 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 4.6 1.02 1 1 2 1 61.811 61.845 2;3 1.8869E-37 18714 20230619_1885_Aki_TMTPro18x_K_F5 296.28 270.16 92030 77481 88785 94212 84481 97317 93443 90818 121670 80016 72290 58295 67225 50064 84638 70953 67258 56425 85088 71069 90430 93815 88417 98018 94547 92958 120270 80874 76215 59940 69556 53051 84721 70203 64445 53786 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4824800000 30214 261 28382 56717;56718;56719;56720;56721 45813;45814 45814 2 9606 Homo sapiens 0.01223388890412025 VVSEIPVLK Unmodified 982.60628 0.60628277 4723 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 yes yes 0 0 0 8 0 1 58.471 58.518 3 0.0038607 17196 20230619_1888_Aki_TMTPro18x_K_F8 78.516 58.903 54328 41767 45803 59167 57965 65924 59958 57769 57847 62776 66464 58678 68429 56465 55254 70514 63323 71365 50151 38386 47507 58367 59319 65942 60271 59724 59428 63049 67811 59728 69137 59080 56952 70634 60565 67744 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18188000 30215 4723 28383 56722 45815 45815 1 9606 Homo sapiens 0.11428388142519452 VVSHPTLPVTITAHEDR Unmodified 1870.9901 0.9901106 1887 A0AV58;Q13033-2;Q13033 STRN3 Striatin-3 yes no 0 0 0 7 0 1 43.318 43.397 4 3.7165E-09 10666 20230619_1887_Aki_TMTPro18x_K_F7 132.51 104.77 22652 20425 23066 24217 24362 22255 25243 23054 28355 24908 24542 26107 24654 19858 24847 25601 32352 25568 20962 18726 23417 24125 25189 22690 25494 23560 28555 25112 25380 26230 25172 20998 25678 25631 30834 24309 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107190000 30216 1887 28384 56723 45816 45816 1 9606 Homo sapiens 0.08945514992342396 VVSLSEYR Unmodified 951.50255 0.50254598 2138 A8K9K6;O00567;A0PJ92;A0A494C128;H0YDU4;H0Y653 NOP56 Nucleolar protein 56 yes no 0 0 0 6.5 0.5 1 1 47.069 47.153 2 1.2576E-06 12252 20230619_1887_Aki_TMTPro18x_K_F7 195.6 144.63 325930 288150 299890 325250 350470 426910 374870 361370 450050 175230 170050 129050 125210 104220 276900 171180 188180 108840 301330 264070 307800 326760 361160 422370 378600 368740 442140 186220 185730 132620 136500 111810 273390 167810 180350 104330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 244310000 30217 2138 28385 56724;56725 45817 45817 1 9606 Homo sapiens 0.0248548103485291 VVSPALR Unmodified 740.45447 0.45447358 3632 Q5BKZ2;P52294;B3KXZ2;B3KWR2;C9JYI4 KPNA1 Importin subunit alpha;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed no no 0 0 0 1 0 1 40.305 40.305 2 0.021607 10231 20230619_1880_Aki_TMTPro18x_K_F1 103.02 38.494 112050 82645 96065 105190 121640 128140 111620 119130 149800 130020 139350 128880 151900 115230 113310 149890 161420 141030 103430 75880 99341 104660 124110 127630 114310 122570 150000 130830 143880 130510 152760 121200 118750 149470 153840 134120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77665000 30218 3632 28386 56726 45818 45818 1 9606 Homo sapiens 0.07386451905472313 VVSPTISSPVCQEQLIEAGK Unmodified 2141.1038 0.10381973 4740 Q9Y4G6 TLN2 Talin-2 yes yes 0 0 0 7 0 1 59.02 59.069 3 0.0071337 17465 20230619_1887_Aki_TMTPro18x_K_F7 61.477 50.216 14182 11265 15798 18376 13635 13861 16020 13955 16438 29383 31571 38594 35177 32839 25016 35398 34065 39732 13123 10370 15894 17902 14380 14362 16041 14682 17375 29125 31872 38533 35323 34185 26176 35743 32545 37671 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25961000 30219 4740 28387 56727 45819 45819 1 9606 Homo sapiens 0.0789119725245655 VVSPWNSEDAK Unmodified 1230.5881 0.58806652 1402 A0A384MDR8;P11177-3;P11177-2;P11177;C9J634;F8WF02;Q59G68 PDHB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes no 0 0 0 5.5 0.5 1 1 50.789 50.866 2 0.00056426 14289 20230619_1886_Aki_TMTPro18x_K_F6 131.82 80.91 71802 61013 73163 73310 71548 76947 90196 84909 91731 90639 94940 95143 106440 85624 82179 104430 114510 107120 66420 55956 74196 73103 74900 77728 89903 86356 93499 91422 97745 96085 107110 89660 85893 104720 109200 101740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 62059000 30220 1402 28388 56728;56729 45820;45821 45821 2 9606 Homo sapiens -0.018003985701625425 VVSQYHELVVQAR Unmodified 1526.8205 0.82052608 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DS66;B4DQY2;Q16891-3;C9J406;H7C463 IMMT MICOS complex subunit MIC60 yes no 0 0 0 8 0 1 45.382 45.41 3 1.1578E-16 11635 20230619_1888_Aki_TMTPro18x_K_F8 217.12 185.6 33565 31231 35667 39735 37388 42223 39747 40215 43817 36695 40778 44838 49082 33022 37549 46360 49482 52249 31079 28650 36109 39456 38764 42456 40072 41139 44274 37525 42363 44756 49235 35203 39091 46670 47248 49554 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101770000 30221 3954 28389 56730 45822 45822 1 9606 Homo sapiens 0.07818863500438056 VVSSIEQK Unmodified 888.49165 0.49164694 2805 D0PNI1;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;Q6LD62 YWHAZ;14-3-3 protein 14-3-3 protein zeta/delta yes no 0 0 0 6 0.816 1 1 1 45.525 45.609 2 0.00039615 11911 20230619_1886_Aki_TMTPro18x_K_F6 179.21 92.344 812010 467590 1043600 1001900 1269100 1371300 945630 1230200 1055900 952000 1441600 1677100 1295000 1299200 1372400 674050 1610200 1484500 751230 432850 1043700 971770 1291000 1354200 977230 1258400 1084200 998870 1456300 1654900 1331300 1319300 1403200 735350 1537400 1401800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1779199999.9999998 30222 2805 28390 56731;56732;56733 45823;45824;45825 45824 3 9606 Homo sapiens 0.042940786605640824 VVSSLQQEIWEEEDLNRK Unmodified 2201.0964 0.096426166 2830 D3DVC4;P48681;Q05BW3;A5PKT9 NES Nestin yes no 0 0 1 4 0 1 60.327 60.33 3 3.1316E-05 18456 20230619_1883_Aki_TMTPro18x_K_F4 88.319 73.549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30223 2830 28391 56734 45826 45826 1 9606 Homo sapiens 0.04392180976401505 VVSSSIVDK Unmodified 932.51786 0.51786169 896 V9HW24;A0A087X2I1;P62333;H0YJC0;H0YJS8 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 6.5 0.5 1 1 47.593 47.681 2 1.1019E-08 12494 20230619_1887_Aki_TMTPro18x_K_F7 214.29 160.73 185830 118740 156450 161650 207890 231370 204770 205300 270900 224190 221310 233650 243800 204310 185840 211390 270140 245180 171370 109170 162190 160600 211990 228010 208600 211950 270200 225980 230390 235650 245450 212170 194760 214150 257480 232600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 311210000 30224 896 28392 56735;56736 45827;45828 45828 2 9606 Homo sapiens 0.04890347832053976 VVTATLWGEDADKFDGSR Unmodified 1965.9432 0.94321999 3514 P27694;I3L4R8 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed yes no 0 0 1 6.5 0.5 1 1 59.078 59.136 3 3.0939E-24 17787 20230619_1886_Aki_TMTPro18x_K_F6 213.69 203.59 92081 75264 94544 78784 79958 110670 99065 102800 99078 96584 101150 94810 108240 86114 109850 97303 86578 78145 85163 68948 95554 79768 84868 109270 98830 105340 101020 97888 103980 96066 110240 89704 110320 96596 83004 74457 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97390000 30225 3514 28393 56737;56738 45829 45829 1 9606 Homo sapiens -0.0011138934946757217 VVTDTDETELAR Unmodified 1347.6518 0.65178899 3389 Q53XC0;P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 1.5 0.5 1 1 44.308 44.308 2 2.6650000000000003E-25 11845 20230619_1881_Aki_TMTPro18x_K_F2 215.72 197.45 700050 592740 607890 656220 639410 803750 697520 673370 807200 821150 867840 880970 964570 720430 741080 1002500 961240 929580 646760 543200 626070 659500 664360 798510 703380 700910 818780 823840 891610 886440 970240 763660 771090 997970 917360 883810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 923060000 30226 3389 28394 56739;56740 45830;45831 45831 2 9606 Homo sapiens -0.008130829237188664 VVTGVANALAHR Unmodified 1206.6833 0.68330431 2797 CON__Q3SX09 yes yes 0 0 0 4 0.816 1 1 1 47.639 47.704 3 2.5093E-111 12883 20230619_1883_Aki_TMTPro18x_K_F4 345.85 276.47 + 198650 229740 275520 236300 432590 434240 358750 355770 543550 288580 434470 523690 305060 387920 721210 387850 577280 638300 184740 210200 275610 240820 434700 422440 371480 367000 537800 302950 446580 516190 336130 404250 716270 404770 554150 603390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2674800000 30227 2797 28395 56741;56742;56743 45832;45833 45833 2 9606 Homo sapiens 0.08822999411540877 VVTKPGHIINPIK Unmodified 1414.866 0.86601971 2653 B4E343;Q9BVJ6;Q9BVJ6-3;Q9BVJ6-2 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 0 0 1 5 0 1 45.901 45.978 4 0.00042426 12102 20230619_1885_Aki_TMTPro18x_K_F5 96.306 63.808 62528 46593 61226 55384 61162 72517 72067 65063 109490 56387 48313 48051 48513 39375 52102 43929 49866 37675 57776 42748 62280 55455 63937 71845 73115 66754 106820 57321 52459 48842 49693 41150 52743 43760 47648 35895 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119350000 30228 2653 28396 56744 45834 45834 1 9606 Homo sapiens 0.1751813375351503 VVTLQGQIIEQSGTMTGGGSK Unmodified 2090.0678 0.067768574 4593 Q9NTJ3;E9PD53;B3KXX5;Q9NTJ3-2 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein yes no 0 0 0 1 0 1 57.924 57.924 3 1.6444E-08 17664 20230619_1880_Aki_TMTPro18x_K_F1 116.43 106.23 29780 23631 30610 30153 29411 35601 39812 33395 38134 41870 36639 39566 46795 33218 35613 44933 43205 43364 27538 21691 31018 29989 30929 35527 39469 34506 38921 41784 38123 40045 46868 35127 36880 44848 41266 41203 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120690000 30229 4593 28397 56745 45835 45835 1 9606 Homo sapiens 0.06633740075540118 VVTMEVEAR Unmodified 1032.5274 0.52738052 2180 Q99829;B0QZ18;F2Z2V0;A6PVH9;E7ENH5;Q5JX58;Q5JX59;Q5JX60;Q5JX44;Q5JX56;Q5JX55 CPNE1 Copine-1 yes no 0 0 0 3.5 0.5 1 1 45.57 45.63 2 0.0013765 12148 20230619_1882_Aki_TMTPro18x_K_F3 116.37 96.585 213470 179950 202080 210330 216760 254160 219320 241160 270350 265830 296250 299560 319900 292540 262570 344470 347240 386220 197340 164990 206500 210530 224280 253370 222680 247840 273590 268410 303730 302480 323230 304710 273150 347390 331690 366250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139890000 30230 2180 28398 56746;56747 45836 45836 1 9606 Homo sapiens 0.01241792845917189 VVTQNICQYR Unmodified 1279.6343 0.63430521 2414 B3KTJ9;Q8N163-2;Q8N163;G3V119;H0YB24;E2PSM9 CCAR2 Cell cycle and apoptosis regulator protein 2 yes no 0 0 0 1.5 0.5 1 1 43.919 43.961 2 5.7323E-10 11645 20230619_1881_Aki_TMTPro18x_K_F2 213.85 186.55 291080 229450 265110 276320 267980 313950 321140 295570 329340 299520 320840 270710 325090 278620 279070 350950 369810 295830 268900 210490 271630 275730 279700 314160 320930 303380 334610 301730 329420 276740 329590 290910 289960 348230 352440 281830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 403250000 30231 2414 28399 56748;56749 45837;45838 45838 2 9606 Homo sapiens 0.005673430602882945 VVTVGQFK Unmodified 876.5069 0.50690308 1430 Q5JPE4;A0A384MR19;F8VXU5;Q9UBQ0;Q9UBQ0-2 DKFZp667O202;VPS29 Vacuolar protein sorting-associated protein 29 yes no 0 0 0 2.5 0.5 1 1 51.624 51.679 3 0.00052209 15187 20230619_1881_Aki_TMTPro18x_K_F2 136.11 106.96 34803 33292 35640 35615 37208 36416 39049 35232 45876 36426 40995 38406 43278 33393 39814 46199 42306 41598 32222 30487 36152 35807 38540 36766 39471 36125 46126 36831 42373 38763 43913 35296 40719 45943 40449 39562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208670000 30232 1430 28400 56750;56751 45839 45839 1 9606 Homo sapiens 0.06370990248422004 VVTVHLEK Unmodified 923.54402 0.54401687 4703 Q9Y266;Q9H2R7 NUDC;NPD011 Nuclear migration protein nudC yes no 0 0 0 4.33 2.87 1 1 1 44.911 44.947 3 1.1974E-05 12306 20230619_1880_Aki_TMTPro18x_K_F1 133.57 65.35 263160 194930 235700 253180 306550 290460 292120 267990 323490 293890 326340 322500 336170 271210 303400 347660 378090 324960 242980 179010 242830 251350 312110 290490 296270 276110 327870 296560 335100 324470 341200 285500 313430 346750 360660 309090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1164400000 30233 4703 28401 56752;56753;56754 45840;45841;45842 45840 3 9606 Homo sapiens 0.0791866179419003 VVTVSGEPEQVHK Unmodified 1407.7358 0.73579339 1623 A0A6Q8PFC2;Q9UNW9 NOVA2 RNA-binding protein Nova-2 yes no 0 0 0 4 0 1 42.452 42.496 3 4.2922E-36 10632 20230619_1883_Aki_TMTPro18x_K_F4 231.06 209.3 44538 38435 47515 50142 46983 51706 55944 56851 72505 47882 54822 56387 53865 48053 50706 58731 57191 57187 41219 35277 48034 49702 49097 52277 56388 57488 72124 49170 57046 56599 54886 50386 52020 58741 54657 54333 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29653000 30234 1623 28402 56755 45843 45843 1 9606 Homo sapiens 0.048234929638283575 VVTVVTTK Unmodified 845.52222 0.52221879 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6;D6RJA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 2 0 1 48.077 48.147 3 0.0058667 13577 20230619_1881_Aki_TMTPro18x_K_F2 90.657 49.628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30235 1002 28403 56756 45844 45844 1 9606 Homo sapiens 0.09327857045616383 VVTYGMANLLTGPK Oxidation (M) 1478.7803 0.78030075 178 A0A024R1Z6;Q99536;Q99536-3;B3KUF8;Q99536-2;K7ESA3 VAT1 Synaptic vesicle membrane protein VAT-1 homolog yes no 0 1 0 3 0 1 56.823 56.859 3 9.3242E-06 17137 20230619_1882_Aki_TMTPro18x_K_F3 116.51 95.848 30495 24679 32664 44022 43054 51005 45944 44683 48262 33432 46437 41109 38286 38129 50044 47154 51924 53601 28212 22745 33239 42903 43989 50856 46213 45799 48886 34656 47365 41347 39938 39887 50770 47607 49674 50836 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94681000 30236 178 28404 56757 45845 45845 114 1 9606 Homo sapiens 0.060061807856527594 VVVAENFDEIVNNENK Unmodified 1831.8952 0.89520716 2389 P30101;V9HVY3;B3KQT9;B3KQT2;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KXC9;B4DJ98;B4DDM1 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 4.5 1.12 1 1 1 1 61.262 61.297 3 8.308500000000001E-20 18819 20230619_1883_Aki_TMTPro18x_K_F4 213.52 184.17 461920 383400 438130 435810 426460 476790 484360 496210 548680 564230 545940 573780 622060 539210 596540 671030 668170 697440 426980 351460 446870 436580 445580 479560 487130 507320 555500 566840 563890 580970 631410 564350 611420 673450 638810 662040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1834799999.9999998 30237 2389 28405 56758;56759;56760;56761 45846;45847 45847 2 9606 Homo sapiens 0.012535367305190448 VVVCDINK Unmodified 945.49535 0.49535211 4033 Q5HYK3;F8VVX6;F8VP53;F8VVW7 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes no 0 0 0 7 0 1 47.526 47.614 2 0.0028615 12501 20230619_1887_Aki_TMTPro18x_K_F7 133.6 74.995 81185 67974 72643 97838 100080 103880 103820 104220 129590 75139 81742 82552 77696 76532 81966 83198 92858 73410 75015 62464 75074 96364 101880 104570 105190 105690 128470 77828 85965 83302 79740 79423 83873 82969 88606 69900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29668000 30238 4033 28406 56762 45848 45848 1 9606 Homo sapiens 0.02042425162778727 VVVCDNGTGFVK Unmodified 1293.6387 0.63872189 3690 P61160;P61160-2;A0A1B0GWD0;A0A1B0GWH0 ACTR2 Actin-related protein 2 yes no 0 0 0 7.67 0.471 1 2 51.964 52.039 2;3 8.4143E-05 14405 20230619_1888_Aki_TMTPro18x_K_F8 123.63 93.816 60989 50564 60485 66924 63310 75634 68446 63359 86426 75321 71554 78540 95647 72826 70132 94322 84686 83962 56395 46423 61575 66330 65748 75519 69252 65919 86448 75627 75192 79399 95601 76469 72698 93790 80882 79860 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212900000 30239 3690 28407 56763;56764;56765 45849;45850 45850 2 9606 Homo sapiens 0.003648074831971826 VVVDALSGLK Unmodified 999.59645 0.59644637 3442 P12532;P12532-2;F8WCN3;B4DH34;E9PCP8;B4DFE8;B4DGR9;C9JSQ1;B4DF72;B4DJW9;B7Z9T7 CKMT1A;CKMT1B Creatine kinase U-type, mitochondrial yes no 0 0 0 1.5 0.5 1 1 61.675 61.68 3 0.00033926 19401 20230619_1881_Aki_TMTPro18x_K_F2 99.973 72.448 104540 89381 97796 94828 36775 41340 62857 60879 64745 101800 110200 120990 113950 105260 127080 118250 115530 132280 96638 81876 98937 94713 43748 46391 62072 62046 67770 101180 111210 121370 116820 109760 128310 119450 110770 125430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61918000 30240 3442 28408 56766;56767 45851 45851 1 9606 Homo sapiens 0.09663200137129024 VVVEPPEGEEK Unmodified 1210.6081 0.60813326 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y7I0;A0A2R8Y7M9;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y6G9 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 0 1 0 1 46.947 46.947 3 0.014941 13094 20230619_1880_Aki_TMTPro18x_K_F1 64.878 50.72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30241 1005 28409 56768 45852 45852 1 9606 Homo sapiens 0.01125352369808752 VVVHQETEIADE Unmodified 1367.6569 0.65687437 3431 P11171;P11171-2;Q1WWM3;A0A2U3TZH6;P11171-4;A0A2R8YD30;Q4VB86;P11171-3;Q59F12;P11171-5;Q4VB87;Q29RX4;A0A3B3ITP0;A0A2R8Y7Y3;P11171-6;B7Z627 EPB41 Protein 4.1 yes no 0 0 0 1 0 1 43.039 43.039 2 0.053093 11454 20230619_1880_Aki_TMTPro18x_K_F1 63.426 53.994 23438 23294 25267 22094 25597 25407 26572 28072 26021 29490 32880 33220 36820 30261 30692 32695 35593 35334 21715 21308 25497 22486 26552 25525 26738 28522 26833 29828 33585 33457 37153 31449 31597 32962 34006 33534 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48901000 30242 3431 28410 56769 45853 45853 1 9606 Homo sapiens -0.01224779061112713 VVVLGLLPR Unmodified 964.64334 0.64333698 99 A0A024R0L6;Q15102;M0R389 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma yes no 0 0 0 6.5 0.5 1 1 62.243 62.287 2 0.0049697 19135 20230619_1886_Aki_TMTPro18x_K_F6 94.262 81.273 500890 407760 434430 458560 396890 464870 447650 487150 501970 400990 403840 337120 383410 346180 510450 438640 263890 235970 462640 373790 446410 459200 417020 470140 450280 493740 504100 408080 417940 345920 397870 361300 502850 428340 254680 226380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 817120000 30243 99 28411 56770;56771 45854 45854 1 9606 Homo sapiens 0.1596010447892695 VVVPATEEEAEVDEFPTDGEMSAQEEDR Unmodified 3107.3401 0.34009943 2315 B5MCF9;B2RDF2;O00541;B3KXD6;B3KTZ6 PES1 Pescadillo homolog yes no 0 0 0 1 0 1 60.151 60.151 3 5.0595E-39 18547 20230619_1880_Aki_TMTPro18x_K_F1 205.73 199.5 3877 3050.2 4324 4989.2 3460.9 5032.4 2191.9 4493.7 5738.5 6109.8 5409.4 6455.3 6829.8 4629.4 5159.2 5574.8 4635.2 6949.4 3587.5 2808.1 4345.2 4875.7 3646.5 5067.6 2402.8 4665.7 5639.1 6097.3 5631.1 6468.1 6836.3 4893.5 5249.7 5662.2 4456 6577.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18036000 30244 2315 28412 56772 45855 45855 1 9606 Homo sapiens -0.12927701803664604 VVVPIYCTSFLAVEEDK Unmodified 1967.9914 0.99141573 3142 J3QK89;Q8IWX8 CHERP Calcium homeostasis endoplasmic reticulum protein yes no 0 0 0 7.5 0.5 1 1 63.933 63.959 3 0.0059959 19602 20230619_1887_Aki_TMTPro18x_K_F7 66.678 47.355 105220 87762 89860 104490 89378 110950 105600 103210 115950 132670 127610 119870 146210 123230 106100 156960 137920 155470 97184 80486 92659 104220 93449 111520 105870 106770 118110 132110 131100 122460 146740 128810 110640 156940 131780 147620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 377970000 30245 3142 28413 56773;56774 45856 45856 1 9606 Homo sapiens 0.04613968246258082 VVVPYQGPSSDYVVVK Unmodified 1734.9192 0.91923707 242 A0A024R3H2;Q92673;E9PKB0;B4DG45;E9PS32;B4DHG9;E9PP43;B4DYT0;E9PPB3;B4DJ13 SORL1 Sortilin-related receptor yes no 0 0 0 1 0 1 59.233 59.233 3 0.0037311 18183 20230619_1880_Aki_TMTPro18x_K_F1 47.532 36.319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30246 242 28414 56775 45857 45857 1 9606 Homo sapiens 0.08117421954830206 VVVQVLAEEPEAVLK Unmodified 1621.9291 0.92907347 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 5 0 1 63.28 63.325 3 1.7401E-10 19418 20230619_1885_Aki_TMTPro18x_K_F5 148.41 115.46 266400 229000 247830 245750 188490 236770 252280 265780 246770 326990 317790 315550 328230 278830 293240 357080 331960 373520 246270 209790 252420 246880 202390 240810 250710 271110 254870 326610 323160 319640 332990 293040 301310 358280 317530 354440 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 933570000 30247 3606 28415 56776 45858;45859 45858 2 9606 Homo sapiens 0.14298609960246722 VVVSGGR Unmodified 672.39187 0.39187332 1075 P13804;A0A0S2Z3L0;P13804-2;A0A8I5KYP7;A0A8I5KUF3;H3BV91;H0YKF0;A0A8I5KT03;A0A8I5KVC9;H0YK49 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial yes no 0 0 0 6.17 1.34 1 1 1 2 1 31.898 31.952 2 0.014094 6396 20230619_1885_Aki_TMTPro18x_K_F5 113.08 87.526 268690 125540 332670 355180 516510 469700 363590 464040 363320 246440 430870 477330 324230 340990 423840 153740 487720 406050 248270 117000 335350 340840 516820 465830 375840 468400 372300 267700 434750 469090 339490 346230 431180 172580 465460 383290 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 311820000 30248 1075 28416 56777;56778;56779;56780;56781;56782 45860;45861;45862;45863;45864 45860 5 9606 Homo sapiens 0.04257305837279546 VVVSGLPPSGSWQDLK Unmodified 1667.8883 0.88827129 3140 J3KTL2;Q07955;Q59FA2;Q07955-3;Q07955-2;A8K1L8;J3KSR8 SRSF1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 2 0 1 61.728 61.738 2 1.7282E-10 19337 20230619_1881_Aki_TMTPro18x_K_F2 151.26 125.87 25716 22676 29455 29382 22145 34959 28865 24796 32383 36880 33132 29707 37929 30255 33416 39799 33546 37720 23819 20810 29514 29185 23836 34667 28828 26368 32851 36418 34145 30516 38327 31712 34104 39705 32124 35834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33454000 30249 3140 28417 56783 45865 45865 1 9606 Homo sapiens 0.08104268640613554 VVVSPTK Unmodified 728.44324 0.44324019 1658 A0A7I2V428;C9JLB1;A0A7I2V3F3;P19338;H7BY16;A0A7I2V5M5;A0A7I2V2U7;A0A7I2V349;A0A7I2V506;A0A7I2V699;Q9BQ02;A0A7I2V2S8 NCL Nucleolin yes no 0 0 0 1 0 1 42.856 42.856 2 0.0075463 11352 20230619_1880_Aki_TMTPro18x_K_F1 124.34 44.889 211590 107940 198960 228450 396430 431580 285480 406360 402660 145590 260470 431580 259520 292880 319450 171440 500290 612530 195100 99971 206310 223180 393390 420030 297940 409470 397010 170110 275190 419880 268580 300450 332920 199270 477710 576700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149640000 30250 1658 28418 56784 45866 45866 1 9606 Homo sapiens 0.06815629811330837 VVVTMEHSAK Unmodified 1099.5696 0.56957969 76 A0A024R040;P55809;Q6IAV5;E9PDW2;B7Z609;P55809-2 OXCT1;OXCT Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes no 0 0 0 7 0.816 1 1 1 42.076 42.133 3 6.7425E-06 10164 20230619_1887_Aki_TMTPro18x_K_F7 158.47 135.15 83039 73406 88957 82077 96589 97950 101070 90730 124360 96254 102620 103170 104500 77028 98515 111920 116470 94640 76868 67266 89942 82429 99786 97725 102330 93360 124420 97245 106400 103570 106260 82181 101340 110900 111120 90153 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157400000 30251 76 28419 56785;56786;56787 45867 45867 1 9606 Homo sapiens 0.023777682543141054 VVVVDDLLATGGTMNAACELLGR Unmodified 2373.2032 0.2032162 3401 P07741;H3BQZ9 APRT Adenine phosphoribosyltransferase yes no 0 0 0 7.5 0.5 1 1 65.707 65.729 3 1.5968000000000001E-34 20391 20230619_1887_Aki_TMTPro18x_K_F7 163.91 149.14 25026 19806 21923 24862 18853 23586 23335 25620 27641 29084 31547 28890 29377 26773 28070 29707 33274 33454 23113 18177 22503 24677 19981 23987 23416 26122 28071 29196 32070 29274 30004 27842 28862 30012 31788 31735 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 311440000 30252 3401 28420 56788;56789 45868;45869 45868 2 9606 Homo sapiens 0.07154271874878759 VVVVDSRPWLEGR Unmodified 1510.8256 0.82561145 2898;4664 E7ERK9;Q9UI10;Q9Y3W7;Q9UI10-3;Q9UI10-2;Q71US4 EIF2B4;DKFZp586J0119 Translation initiation factor eIF-2B subunit delta no no 0 0 1 1.5 0.5 1 1 52.149 52.168 3 1.0498E-10 15235 20230619_1880_Aki_TMTPro18x_K_F1 173.06 117.6 87331 74275 79942 85202 92582 112440 101540 95513 129430 100050 91919 85621 98237 88952 102130 102960 98403 97320 80716 68088 82067 85506 95546 111230 102660 98855 128720 100540 96332 87721 100300 92374 103590 102940 94179 92498 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 226920000 30253 2898;4664 28421 56790;56791 45870 45870 1 9606 Homo sapiens 0.09063167363092361 VVVVGDQSAGK Unmodified 1057.5768 0.57677356 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YD53;A0A2R8YGE5;A0A2R8Y4Q3;A0A2R8YE54;A0A2R8Y4G4 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 6 0 1 45.26 45.347 3 0.0054404 11846 20230619_1886_Aki_TMTPro18x_K_F6 58.37 44.778 300810 186460 316070 370680 459630 471100 373320 492480 444940 340500 477000 447540 367360 352350 416060 255060 524770 515850 277840 172320 322230 360170 463510 468910 383940 497170 450000 355500 482950 446200 381080 361640 427290 272980 500980 487230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 181840000 30254 2865 28422 56792 45871 45871 1 9606 Homo sapiens 0.05028824126384279 VVVVTGANTGIGK Unmodified 1213.703 0.7030367 1120 A0A0S2Z583;Q8TC12;A0A0S2Z575;Q8TC12-3;G3V2G6;G3V234 RDH11 Retinol dehydrogenase 11 yes no 0 0 0 2.5 0.5 1 1 51.095 51.153 3 4.4963E-06 14651 20230619_1882_Aki_TMTPro18x_K_F3 128.1 87.102 149060 122200 152990 150780 156640 179150 178040 152810 204860 162660 171140 166760 179650 143790 170660 178060 181270 187310 137860 112120 155150 150300 163040 178390 179030 158270 205720 164110 177540 168370 182610 150960 174320 178880 173380 177790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 146920000 30255 1120 28423 56793;56794 45872;45873 45873 2 9606 Homo sapiens 0.10473330631634781 VVVVVPNEEDWK Unmodified 1411.7347 0.73473076 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 4.5 0.5 1 1 60.673 60.699 3 0.0014802 18162 20230619_1885_Aki_TMTPro18x_K_F5 83.182 67.916 61349 52025 69775 67749 64219 64189 74686 78030 79068 99317 95131 96719 103370 78099 117500 94191 99116 114980 56805 47752 70079 67108 67337 65514 74877 79308 81048 99081 97273 97632 105810 82119 118090 95626 95121 108930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131730000 30256 3957 28424 56795;56796 45874 45874 1 9606 Homo sapiens 0.04533278594931289 VVYASATGASEPR Unmodified 1306.6517 0.65172941 1925 A3KN83-4;A3KN83-3;A3KN83-2;A3KN83;B4DV91;B4DL53;K7ES28;Q9Y2G9-3;Q9Y2G9 SBNO1;SBNO2 Protein strawberry notch homolog 1;Protein strawberry notch homolog 2 yes no 0 0 0 6 0 1 40.955 41.049 2 3.723E-12 9965 20230619_1886_Aki_TMTPro18x_K_F6 162.38 129.54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30257 1925 28425 56797 45875 45875 1 9606 Homo sapiens 0.010669618669453484 VVYENAYGQFIGPHR Unmodified 1748.8635 0.86345352 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7;E9PKD3 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 0 1.5 0.5 1 1 51.516 51.539 3 8.207199999999999E-43 15107 20230619_1881_Aki_TMTPro18x_K_F2 222.56 200.35 141230 109900 127360 141050 134790 164540 145500 154910 173450 161400 163320 180020 187680 160620 161420 204580 207520 201950 130440 100890 130740 140170 139900 164320 146980 159070 174740 163360 169210 181280 189600 168630 167380 204600 198070 191860 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 308460000 30258 682 28426 56798;56799 45876;45877;45878 45877 3 9606 Homo sapiens 0.0189763355785999 VVYENGVFMCAEGTGK Unmodified 1759.7909 0.79094179 4008 Q53SW3;Q9BPU6 DPYSL5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 6.5 0.5 1 1 57.277 57.341 3 1.2154E-05 16997 20230619_1886_Aki_TMTPro18x_K_F6 99.055 94.507 38029 32788 43182 39624 32479 31452 35134 33341 38937 51764 52149 52781 61857 44523 49202 55464 55078 57047 35216 30070 43241 39369 34607 32495 35430 34445 40044 51331 53302 53245 62160 46820 50612 55630 52655 54160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43232000 30259 4008 28427 56800;56801 45879 45879 1 9606 Homo sapiens -0.058562046222277786 VVYGGGAAEISCALAVSQEADK Unmodified 2194.0576 0.057597819 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 0 6 0 4 69.04 69.097 3;4 5.8431E-06 19056 20230619_1886_Aki_TMTPro18x_K_F6 95.666 87.478 76364 57162 82342 63543 66285 71557 69214 111170 80619 79642 67562 80383 83585 64037 89488 81469 93075 81261 70620 52395 82777 63873 70051 72658 69976 109740 81028 82105 70643 80905 85047 67551 91037 81607 88937 77227 3 2 3 3 2 3 2 2 3 3 2 2 3 3 3 3 3 3 390770000 30260 2633 28428 56802;56803;56804;56805 45880;45881;45882;45883 45880 4 9606 Homo sapiens 0.008331323503625754 VVYGGGAAEISCALAVSQEADKCPTLEQYAMR Unmodified 3443.616 0.61596089 2633 P48643;V9HW37;Q9BU08;B4DZT5;E7ENZ3;B4DXI1;E9PCA1;B7ZAR1;B4DDU6;B4DYC8;P48643-2;B4DE30;B4DX08;Q96GI1;Q9HB74 CCT5;HEL-S-69 T-complex protein 1 subunit epsilon yes no 0 0 1 7.5 0.5 1 1 62.495 62.526 4 5.3616E-15 18841 20230619_1888_Aki_TMTPro18x_K_F8 130.25 121.63 64609 60970 72508 78641 57899 67179 81148 67845 56441 83046 78312 47861 58132 41767 91371 46465 39548 34092 59860 55936 72830 77814 61841 68815 79728 69720 59853 81976 78313 50008 61413 43586 89221 46085 38303 32532 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 479770000 30261 2633 28429 56806;56807 45884 45884 1 9606 Homo sapiens -0.00810244761123613 VVYIFGPPVK Unmodified 1117.6536 0.65356732 1182 B4DUT7;A0A140VJK6;P49915-2;P49915;Q53F90 GMPS GMP synthase [glutamine-hydrolyzing] yes no 0 0 0 4.5 0.5 1 1 62.361 62.387 3 0.0010164 18997 20230619_1885_Aki_TMTPro18x_K_F5 93.551 80.459 342260 266360 313180 359490 291380 344940 317430 279840 325040 354680 321210 356600 383390 361690 302370 451630 412260 368620 316160 244660 320500 355040 305300 348350 318840 292660 330890 354580 332680 362120 385850 377380 315770 447340 393080 351160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 564380000 30262 1182 28430 56808;56809 45885 45885 1 9606 Homo sapiens 0.09944667413492425 VVYILEK Unmodified 862.51641 0.51640513 4211 Q8IYB7;B4DI15;Q8IYB7-3;Q8IYB7-2 DIS3L2 DIS3-like exonuclease 2 yes no 0 0 0 8 0 1 58.815 58.856 2 0.0074997 17319 20230619_1888_Aki_TMTPro18x_K_F8 108.09 62.774 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30263 4211 28431 56810 45886 45886 1 9606 Homo sapiens 0.07964758533944405 VWAEYALK Unmodified 978.51747 0.51746776 1863 A0A994J491;Q6P2Q9;A0A994J6E8;B4DK16 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 4.5 3.5 1 1 59.783 59.802 2;3 0.0094665 18400 20230619_1880_Aki_TMTPro18x_K_F1 109.86 67.753 123110 105270 115750 124520 109880 148570 137670 132090 146460 119170 127930 121220 127410 110320 125890 132400 130140 131790 113810 96527 118210 124490 115570 147960 137460 135760 147860 121260 132090 122660 130010 115320 128310 132650 124490 125170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51443000 30264 1863 28432 56811;56812 45887;45888 45887 2 9606 Homo sapiens 0.027349729028514957 VWDDGIIDPADTR Unmodified 1471.6943 0.69432251 1223 Q9HCC0;Q9HCC0-2;A0A804HLJ9;A0A140VK29;A0A804HKE8;A0A804HJ24;A0A804HK37;A0A804HJ84;A0A804HJ31;A0A804HL02;A0A804HJL2;A0A804HJC1 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 2 0.816 1 1 1 59.272 59.286 2 3.171E-07 18308 20230619_1881_Aki_TMTPro18x_K_F2 147.62 128.88 44850 44141 51782 48630 42645 55699 61349 49727 58270 61980 60370 47818 54127 44799 57503 53291 54375 47187 41577 40429 51892 48858 45543 55645 60662 51564 59626 61556 61501 49107 55583 46773 58216 53096 52006 44909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38253000 30265 1223 28433 56813;56814;56815 45889 45889 1 9606 Homo sapiens -0.022656877954887022 VWDISGLR Unmodified 944.50797 0.50796571 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3ITV3;A0A3B3ISK1;A0A3B3IU78 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 1 0 1 57.816 57.816 2 0.00013593 17591 20230619_1880_Aki_TMTPro18x_K_F1 192.31 58.71 367230 328030 362530 375710 341740 440270 403480 429170 455490 484600 437990 439630 492410 399820 450430 514050 479570 530350 339730 300640 368530 376460 358800 439950 404980 440510 460720 485350 452630 447020 498730 419980 460750 515440 458920 503370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 467640000 30266 3647 28434 56816 45890 45890 1 9606 Homo sapiens 0.03349204617336454 VWDISHPGNK Unmodified 1151.5724 0.57235688 1886 Q04727-3;Q04727;Q04727-4;Q04727-2;A0A994J7T6;B3KQ29;Q04724;B4DEF9;Q59EF7;H7C4E4 TLE4;TLE1 Transducin-like enhancer protein 4;Transducin-like enhancer protein 1 yes no 0 0 0 4.5 3.5 1 1 46.692 46.716 3 0.0010765 12183 20230619_1888_Aki_TMTPro18x_K_F8 93.058 66.272 85755 71295 94650 90028 86178 86710 90169 85820 101520 109340 115910 112010 121790 100410 98450 123860 141700 126890 79371 65422 95234 89360 90207 87949 91085 88395 103400 109320 118450 113220 123030 105220 103040 124180 135060 120540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 231970000 30267 1886 28435 56817;56818 45891;45892 45892 2 9606 Homo sapiens 0.002633597034673585 VWDLAQQVVLSSYR Unmodified 1662.873 0.87295558 93 A0A024R0H7;Q9BQA1;H0Y711 WDR77 Methylosome protein 50 yes no 0 0 0 5 0 1 65.099 65.143 3 1.3557E-11 20210 20230619_1885_Aki_TMTPro18x_K_F5 170.95 151.29 30414 18296 21050 22318 26370 35965 28366 26508 36838 16085 14766 9965.9 14147 13907 16394 12526 13605 11764 28005 16807 22260 22379 27118 35090 28718 27448 36104 16687 16136 10550 14586 14141 16454 12583 13032 11189 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102870000 30268 93 28436 56819 45893 45893 1 9606 Homo sapiens 0.06803401843421852 VWDLFPEADK Unmodified 1218.5921 0.59208927 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4DRU0;B4DVU3;B4E2Z6;B4DDN4;B3KNZ4;A0A024QYX7 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 0 6.5 0.5 1 1 63.587 63.628 3 0.029076 19748 20230619_1886_Aki_TMTPro18x_K_F6 56.359 41.669 284830 243550 272380 268500 244850 308090 294430 315050 313740 334680 272720 280000 345580 279980 298490 370070 318480 333480 263360 223180 277340 269780 258140 308660 294700 321750 317230 335480 285010 286790 348090 293650 305850 368170 304630 317070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 195580000 30269 12 28437 56820;56821 45894;45895 45894 2 9606 Homo sapiens -0.008463090764280423 VWDPDNPLTDR Unmodified 1326.6204 0.62042929 317 A0A024R534;O94776;O94776-2 MTA2 Metastasis-associated protein MTA2 yes no 0 0 0 2.5 0.5 1 1 55.829 55.859 2 1.7963E-08 16714 20230619_1882_Aki_TMTPro18x_K_F3 174.86 154.58 76739 72192 90998 93481 88846 114890 115730 107270 112680 118160 102170 106280 122260 98513 107870 127850 122030 120910 71134 66235 91282 92929 93227 114320 115010 110400 114630 118460 106250 108170 123440 103460 110830 127560 116610 114920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 131840000 30270 317 28438 56822;56823 45896 45896 1 9606 Homo sapiens -0.029816111671834733 VWDVESGSLK Unmodified 1118.5608 0.56078914 4009 Q9GZL7;Q53T99;B4DRY7 WDR12 Ribosome biogenesis protein WDR12 yes no 0 0 0 4.5 0.5 1 1 56.654 56.688 3 0.027758 16413 20230619_1885_Aki_TMTPro18x_K_F5 57.203 30.761 60907 53001 62401 62459 57021 69605 70202 65214 77669 78647 82146 81376 85264 72024 79265 93103 88249 94805 56353 48595 63198 62409 60054 69736 70255 67299 78888 78852 84207 82196 86640 75725 81283 93272 84395 90005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295810000 30271 4009 28439 56824;56825 45897 45897 1 9606 Homo sapiens 0.0062511788946721936 VWDVRPFAPK Unmodified 1213.6608 0.66077796 1897 B2R9I9;A0MNP2;Q96DI7;Q96DI7-2;Q9NSS8 WDR57;SNRNP40;DKFZp434D199 U5 small nuclear ribonucleoprotein 40 kDa protein yes no 0 0 1 4 0 1 54.891 54.903 3 0.040775 16182 20230619_1883_Aki_TMTPro18x_K_F4 55.721 28.196 286260 234680 264610 275140 253910 290470 298660 281820 336250 288230 268520 240080 286510 229230 290620 311700 275950 248910 264540 215200 270530 274800 265940 292380 299660 288720 337660 289610 279360 245730 291960 241200 294750 308350 263980 237180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120340000 30272 1897 28440 56826 45898 45898 1 9606 Homo sapiens 0.06249400013916784 VWDYETGDFER Unmodified 1415.5994 0.59935949 1628 A0A6Q8PFU3;P43034;A0A6Q8PFT2;A0A6Q8PG63;A0A6Q8PH33 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 0 1.5 0.5 1 1 56.415 56.424 2 4.0707E-18 17143 20230619_1881_Aki_TMTPro18x_K_F2 242.39 232.15 103350 87077 98281 108910 81022 96412 102490 101440 107660 134630 122750 131360 138880 121250 137380 138430 136550 154510 95545 79893 100070 108040 86156 98554 102300 104200 110140 134130 126030 133100 141160 126340 139680 139730 130780 146520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143970000 30273 1628 28441 56827;56828 45899 45899 1 9606 Homo sapiens -0.09181621266702678 VWELGGCANK Unmodified 1132.5335 0.53352853 3408 Q6IAX9;P08240-2;P08240;A0A024R3M0 SRPR Signal recognition particle receptor subunit alpha yes no 0 0 0 8 0 1 53.641 53.713 3 0.019428 15145 20230619_1888_Aki_TMTPro18x_K_F8 63.734 37.061 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30274 3408 28442 56829 45900 45900 1 9606 Homo sapiens -0.027436889225555205 VWEQIDQMK Oxidation (M) 1191.5594 0.55940893 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 1 0 5 0 1 53.238 53.31 3 0.0018534 15171 20230619_1885_Aki_TMTPro18x_K_F5 87.806 54.808 51947 41454 46791 52419 53614 56046 59367 55045 62404 59574 67159 69083 67546 56302 68370 77293 64919 76628 47987 38046 48099 52080 55284 56384 59609 56444 63581 60253 68727 69296 68948 59605 69375 77268 62229 72746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62828000 30275 3881 28443 56830 45901 45901 2565 1 9606 Homo sapiens -0.02870839470961073 VWETANNR Unmodified 988.47264 0.47264284 3916 Q15061 WDR43 WD repeat-containing protein 43 yes yes 0 0 0 5.5 0.5 1 1 40.366 40.456 2 0.00016799 9704 20230619_1885_Aki_TMTPro18x_K_F5 170.87 133.88 202530 144640 197730 207130 244230 278760 226380 226590 300240 235440 254610 241210 289660 224440 238660 242250 308700 240510 187090 132990 202030 204870 249730 275150 231540 235280 299740 237860 264760 244090 292030 233120 247420 243090 294220 228710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 154870000 30276 3916 28444 56831;56832 45902;45903;45904 45902 3 9606 Homo sapiens -0.022054579104747063 VWGNVGTVEWADPIEDPDPEVMAK Oxidation (M) 2669.2319 0.23193337 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;B7Z645;A0A7I2V346;O60506-5;A0A7I2V5Q6;A0A7I2YQV8;B2R8Z8;O60506;A0A7I2V309 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 1 0 3 0 1 63.798 63.829 3 0.00039575 20034 20230619_1882_Aki_TMTPro18x_K_F3 65.454 56.745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30277 1680;2265 28445 56833 45905 45905 1100 1 9606 Homo sapiens -0.03591332014912041 VWGVPIPVFHHK Unmodified 1414.7874 0.78737546 2081 A8K5W7;Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 0 5.5 0.5 1 1 55.893 55.962 4 0.0033362 16429 20230619_1886_Aki_TMTPro18x_K_F6 74.944 48.825 55813 41069 54198 60685 52896 63558 60612 56328 74183 40233 35507 27825 35555 30725 43248 37477 39246 32565 51564 37771 55218 59678 55315 63848 61054 57640 73162 41228 38224 28953 36673 31960 43586 37300 37543 31007 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110890000 30278 2081 28446 56834;56835 45906 45906 1 9606 Homo sapiens 0.09657326239062058 VWIKPGAEQSFLYGNHVLK Unmodified 2185.1684 0.16840932 4698 Q9Y221;J3QRD6;J3QRR4 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog yes no 0 0 1 4.5 0.5 1 1 58.42 58.449 4 2.6976E-24 17247 20230619_1885_Aki_TMTPro18x_K_F5 201.96 174.47 62159 54440 65350 70135 65479 77003 72732 72650 72428 82676 79251 78823 79347 54609 85215 66086 65009 53820 57527 49957 66158 69621 68208 77229 72929 74786 74139 82856 81022 79321 81131 57777 85324 65619 62318 51290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 206390000 30279 4698 28447 56836;56837 45907 45907 1 9606 Homo sapiens 0.12323184911383578 VWLDPNETNEIANANSR Unmodified 1941.9181 0.91806787 1679 J3QR09;J3KTE4;Q53G49;A0A7I2YQG2;P84098;Q8IWR8;A0A7I2V638;A0A7I2V4U6;A0A7I2V2L0;A0A7I2V512 RPL19 Ribosomal protein L19;60S ribosomal protein L19 yes no 0 0 0 3.75 0.829 2 1 1 56.97 57.003 2;3 3.3078E-30 16645 20230619_1885_Aki_TMTPro18x_K_F5 231.41 212.35 91519 87615 94775 92287 81664 113510 107590 105360 106180 111120 88061 83470 135520 97801 75762 142840 131310 135420 84740 80223 95834 93148 86703 112960 106940 108320 107650 111170 93196 86587 133920 102910 81525 142170 125130 128690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1526599999.9999998 30280 1679 28448 56838;56839;56840;56841 45908;45909 45909 2 9606 Homo sapiens -0.015214441519674438 VWLYHDGR Unmodified 1044.5141 0.51411372 337 A0A024R5F4;P50416;B2RAQ8;P50416-2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 0 8 0 1 44.101 44.12 3 7.6154E-05 11125 20230619_1888_Aki_TMTPro18x_K_F8 148.04 125.26 37012 32443 37094 37895 57999 60115 69497 73899 69327 38897 34772 33861 34224 28795 35504 39327 38432 35855 34240 29742 38017 38140 58840 59408 69343 73543 69168 41055 37292 34471 35029 30429 36263 39145 36725 34102 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55703000 30281 337 28449 56842 45910 45910 1 9606 Homo sapiens -0.0063627715114762395 VWNLANCK Unmodified 1003.4909 0.49093544 2907 P63244;E9KL35;J3KPE3;H0Y8W2;D6RAC2;D6REE5;H0YAM7;D6RHH4;D6R9L0;D6R9Z1;D6RFX4;B4DVD2;D6RBD0;H0Y8R5 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 53.871 53.905 3 0.0014712 15768 20230619_1883_Aki_TMTPro18x_K_F4 101.28 67.031 874730 762530 848660 779660 780960 1116300 880450 861460 1188400 806720 739280 744100 814360 668600 732920 891530 823650 839470 808970 698240 863120 790780 821850 1097000 891310 896030 1174400 817430 782900 755940 825060 704090 752600 888920 787290 797830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 496330000 30282 2907 28450 56843;56844 45911;45912 45912 2 9606 Homo sapiens -0.010670392601355161 VWNWQSR Unmodified 974.47225 0.47224891 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ITV3;A0A3B3ISK1 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 4 0 1 51.055 51.086 2 0.070927 14470 20230619_1883_Aki_TMTPro18x_K_F4 76.774 50.081 206440 178040 208280 185290 217410 320930 260370 246690 328750 136190 145480 132220 147170 117300 163230 123950 152560 146910 190970 163060 211560 188380 226980 312320 261950 254120 323050 143890 157930 134020 150930 121930 164890 125870 146030 139320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 62426000 30283 3647 28451 56845 45913 45913 1 9606 Homo sapiens -0.016008328396765137 VWPEEENYK Unmodified 1192.5401 0.5400537 4809 yes no 0 0 0 6.33 0.471 2 1 40.019 40.099 4 0.013333 9568 20230619_1886_Aki_TMTPro18x_K_F6 60.973 29.899 + 212910 173540 186440 198670 271340 347240 252380 262770 407790 126170 134070 141460 130810 111940 149750 116630 157410 128230 196660 159110 193030 200470 275370 337740 260070 270500 394800 135950 150350 141970 134670 116690 152160 117900 150330 121770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106390000 30284 4809 28452 56846;56847;56848 45914 45914 1 9606 Homo sapiens -0.04851472490190645 VWQCGGSLEIIPCSR Unmodified 1760.8338 0.83380965 1287 B7Z462;G3V1S6;B7Z6K2;A0A1L7NY50;A0A1L7NY41;Q10471 GALNT2 Polypeptide N-acetylgalactosaminyltransferase;Polypeptide N-acetylgalactosaminyltransferase 2;Polypeptide N-acetylgalactosaminyltransferase 2 soluble form yes no 0 0 0 2 0 1 59.988 59.999 3 2.698E-08 18637 20230619_1881_Aki_TMTPro18x_K_F2 141.55 125.61 22219 23620 22856 20715 26188 28387 27806 27869 27930 25633 20674 20709 21231 20411 29327 26408 31356 23121 20588 21589 23204 21288 26969 28129 27943 28432 28170 25878 21602 21243 22064 21371 29771 26269 29925 22026 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14501000 30285 1287 28453 56849 45915 45915 1 9606 Homo sapiens -0.016173897741055043 VWQLGSSSPNFTLEGHEK Unmodified 2014.9749 0.97485447 3031 H0Y938;H0YAC7;P35606-2;P35606;A0A7I2V258;B4E2C9;A0A7I2V3G0;A0A7I2YQF9 COPB2 Coatomer subunit beta' yes no 0 0 0 4.5 3.5 1 1 56.878 56.907 3 6.285700000000001E-25 16493 20230619_1888_Aki_TMTPro18x_K_F8 217.26 200.58 105340 97599 113100 117990 103660 126640 122130 117340 117810 138640 120970 125110 140810 114640 123360 144230 141880 145330 97544 89487 114150 117600 108950 127180 121970 121110 120540 138520 124880 127250 142230 120220 126880 144460 135590 138010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 221610000 30286 3031 28454 56850;56851 45916;45917 45917 2 9606 Homo sapiens 0.007966034045011838 VWQLQDLSFQTAAR Unmodified 1661.8526 0.85255449 2154 A8KAK1;Q9NYU2-2;Q9NYU2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 2.5 0.5 1 1 62.505 62.525 3 0.00070449 19749 20230619_1881_Aki_TMTPro18x_K_F2 85.976 77.247 79765 64947 83432 85006 72966 88662 95939 76603 99877 87968 82861 90297 99012 82656 83731 111750 99409 110820 73782 59625 84322 84236 77270 89079 95481 79474 100840 88413 86580 91321 99831 87061 86437 111690 95041 105230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 106120000 30287 2154 28455 56852;56853 45918 45918 1 9606 Homo sapiens 0.04810231183614633 VWQVTIGTR Unmodified 1058.5873 0.58727866 2907 P63244;E9KL35;J3KPE3;D6RAC2;H0YAF8;D6RHH4;H0Y8R5;D6RF23;D6RHJ5 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 53.656 53.701 2 0.00072145 15316 20230619_1885_Aki_TMTPro18x_K_F5 140.83 93.086 885470 687750 737630 750600 732520 878670 868480 883630 906270 916470 907930 859370 1014500 808120 865040 951400 958500 924830 817370 630390 761720 754950 765760 878930 869110 903010 921490 922650 935780 873530 1024500 843190 887870 952100 915950 878810 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1414200000 30288 2907 28456 56854;56855 45919;45920;45921 45921 3 9606 Homo sapiens 0.06032851571490028 VWVVATK Unmodified 801.47487 0.47487467 1628 A0A6Q8PFU3;P43034;A0A6Q8PFT2;A0A6Q8PG63;B4DF38;I3L3N5;B4DZN3 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 0 3.5 0.5 1 1 54.422 54.453 2 0.0075142 15969 20230619_1883_Aki_TMTPro18x_K_F4 133.47 66.3 149620 117290 145420 154460 143610 166770 159100 162650 188830 184390 199210 198180 212970 181900 169070 217960 228010 226700 138280 107700 148110 153080 149840 167570 160490 167030 191110 185620 204440 200070 214890 190090 176210 218790 217580 215240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227700000 30289 1628 28457 56856;56857 45922 45922 1 9606 Homo sapiens 0.0661962256527886 VYAAATEDMDCLTFGSPVLMR Oxidation (M) 2362.0643 0.064339455 3568 Q6FHX6;P39748;B4DWZ4;P39748-2 FEN1 Flap endonuclease 1 yes no 0 1 0 6 0 1 63.215 63.263 3 0.022364 19595 20230619_1886_Aki_TMTPro18x_K_F6 45.347 40.243 38281 36652 40179 28382 42389 46485 50472 36903 45189 35923 41481 41022 48415 48339 39013 75210 39835 52280 35449 33483 40628 29641 44036 45450 50226 38359 46158 36559 43038 41767 48799 50966 40093 73751 38192 49853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74266000 30290 3568 28458 56858 45923 45923 2242 1 9606 Homo sapiens -0.062210140849401796 VYAAATEDMDCLTFGSPVLMR Unmodified 2346.0694 0.069424833 3568 Q6FHX6;P39748;B4DWZ4;P39748-2 FEN1 Flap endonuclease 1 yes no 0 0 0 6 0 1 64.065 64.111 3 7.8517E-37 19975 20230619_1886_Aki_TMTPro18x_K_F6 221.47 207.88 34638 21914 27458 30590 27814 30221 32131 36196 33189 28951 35707 37329 37924 30634 37719 37459 40156 41962 31929 20154 28514 30175 28989 30715 32196 36365 33830 29892 36634 37306 38615 32190 38492 37785 38410 39802 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 69034000 30291 3568 28458 56859 45924;45925 45924 2 9606 Homo sapiens -0.04976710222354086 VYAENAIR Unmodified 934.48723 0.48723027 1615 A0A6Q8PGM8;B4DXN3;A0A6Q8PF35;F8VUA2;F8VVT7;F5H875;A0A6Q8PFF9;Q9HD42;A0A6Q8PG85 CHMP1A Charged multivesicular body protein 1a yes no 0 0 0 5 0 1 40.381 40.469 2 0.0067255 9748 20230619_1885_Aki_TMTPro18x_K_F5 119.29 83.797 139670 128230 133190 165250 171710 180610 151540 162890 209700 152230 176140 157910 175980 145770 166800 179160 198560 145640 129200 117650 136590 163980 174820 181070 155760 167340 208820 154740 182160 159780 179200 152490 171570 177620 189300 138880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134860000 30292 1615 28459 56860 45926 45926 1 9606 Homo sapiens 0.017366142376431526 VYAILTHGIFSGPAISR Unmodified 1800.9887 0.98865404 3683;2257 Q53FW2;P60891;B1ALA9;A0A2R8Y7H4;P60891-2;A0A6Q8PGP2;B7ZB02;A0A0A0MRQ9;B2R860;P11908;A0A140VK41;P11908-2;H7C540 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 0 0 8 0 1 62.389 62.414 3 2.2785E-48 18834 20230619_1888_Aki_TMTPro18x_K_F8 280.7 261.46 117220 105950 107850 129980 105350 131360 110680 106390 114170 140370 138920 143990 136380 132160 126710 125750 142720 178170 108390 97162 110440 129270 109900 132140 111450 111380 117230 140130 141290 145510 138910 136400 129910 129410 136650 168540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 189300000 30293 3683;2257 28460 56861 45927 45927 1 9606 Homo sapiens 0.12019925694266931 VYASSGDGEVYVWDVNSR Unmodified 2001.9068 0.90683448 2289 B2RAX6;Q9Y5J1;J3KSR7;J3QR85;J3QRG0 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 0 0 0 4 0 1 58.479 58.482 2 3.7759E-07 17689 20230619_1883_Aki_TMTPro18x_K_F4 125.61 110.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30294 2289 28461 56862 45928 45928 1 9606 Homo sapiens -0.05404266246137013 VYAVATSTNTPCAR Unmodified 1509.7246 0.72457678 2834 D3DWL9;Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes no 0 0 0 1.5 0.5 1 1 42.975 43.016 3 1.1338E-08 11249 20230619_1881_Aki_TMTPro18x_K_F2 152.4 140.61 91856 76935 84957 100480 97701 113700 99257 111160 127410 113920 126400 108570 109490 105050 118260 119910 118290 105310 84896 70621 87168 99684 100620 113880 100890 113760 128100 114860 128890 110420 112780 109190 120110 119460 113090 100230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81386000 30295 2834 28462 56863;56864 45929 45929 1 9606 Homo sapiens -0.0098965240194957 VYCENQPMLPIGLSDIPGEAMVK Unmodified 2560.2376 0.23755279 3202 P67870;Q5SRQ6;N0E4C7;Q5SRQ3 CSNK2B;CSNK2B-LY6G5B-1181 Casein kinase II subunit beta yes no 0 0 0 8 0 1 64.222 64.243 3 3.3603E-13 19620 20230619_1888_Aki_TMTPro18x_K_F8 127.5 112.25 13779 11664 13090 14557 10620 18815 13767 15371 17187 22511 21178 21707 25731 20394 15823 28645 24705 25458 12738 10702 13335 14514 11374 18605 13814 16122 17502 22338 21729 22036 25643 21520 16826 28434 23557 24211 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57304000 30296 3202 28463 56865 45930 45930 1 9606 Homo sapiens 0.019843519714868307 VYDQMPEPR Oxidation (M) 1149.5125 0.51245874 2001 F5H5N1;B7Z1U1;A8K0V6;Q8NAS7;Q7LD69;F5GXJ1;O75251-2;O75251 NDUFS7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes no 0 1 0 2.5 0.5 1 1 36.77 36.827 2 0.0067113 8406 20230619_1881_Aki_TMTPro18x_K_F2 87.308 68.037 43569 34422 41013 53945 60461 62211 58879 55741 65756 46527 58658 54752 64603 60426 46661 68301 69298 62617 40258 31671 42248 52930 61191 62114 59639 57165 66252 47825 60731 55478 64958 62520 49129 68133 66039 59559 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69548000 30297 2001 28464 56866;56867 45931 45931 1256 1 9606 Homo sapiens -0.0563169902206937 VYDQMPEPR Unmodified 1133.5175 0.51754412 2001 F5H5N1;B7Z1U1;A8K0V6;Q8NAS7;Q7LD69;F5GXJ1;O75251-2;O75251 NDUFS7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes no 0 0 0 3.5 0.5 1 1 43.887 43.944 2 0.00078841 11383 20230619_1882_Aki_TMTPro18x_K_F3 123.35 83.31 79159 62925 81389 87117 99434 114660 98497 91729 108230 96674 108320 101120 118280 86103 83465 110290 119970 105830 73201 57809 82811 86306 101860 113290 99653 95438 109690 97615 111480 102000 118680 90652 87640 110120 114340 100610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111930000 30298 2001 28464 56868;56869 45932 45932 1 9606 Homo sapiens -0.04387395159460539 VYDQVVEDLNSR Unmodified 1435.6943 0.69432251 2545 B4DMK6;Q9NP77 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 yes no 0 0 0 3 0 1 58.363 58.394 3 4.4842E-09 17757 20230619_1882_Aki_TMTPro18x_K_F3 125.89 114.73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30299 2545 28465 56870 45933 45933 1 9606 Homo sapiens -0.006096877954632873 VYEDWDCFK Unmodified 1260.5121 0.51212439 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3;Q9BTE3-3 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 0 4 0 1 60.373 60.376 2 0.024909 18502 20230619_1883_Aki_TMTPro18x_K_F4 71.379 60.228 48078 41518 53077 52461 49786 64582 54498 56481 62724 67483 67311 65439 72466 58699 58248 81858 73955 80442 44510 38093 53460 52239 52170 64172 54958 58539 63655 67547 69043 66333 73114 62015 60482 81729 70653 76395 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29200000 30300 1140 28466 56871 45934 45934 1 9606 Homo sapiens -0.10771118741945429 VYEGERPLTK Unmodified 1190.6295 0.62953741 3429 V9HWB4;P11021;A0A7P0TAI0 HEL-S-89n;HSPA5 78 kDa glucose-regulated protein yes no 0 0 1 6.5 1.12 1 1 1 1 41.044 41.105 3 0.0010437 9704 20230619_1887_Aki_TMTPro18x_K_F7 90.104 71.943 788910 588950 668110 745310 848080 887780 879460 873000 1042500 960770 1051100 1065300 1070100 912950 1018600 1289500 1194500 1098400 728160 540680 691920 741650 867600 886650 889790 895130 1053000 969600 1079000 1072200 1089400 966230 1047900 1278300 1140500 1045700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6717599999.999999 30301 3429 28467 56872;56873;56874;56875 45935;45936;45937 45937 3 9606 Homo sapiens 0.041847821891678905 VYEIDDVER Unmodified 1136.535 0.53496832 1040 B7WPD9;A0A0G2JR66;Q2KJY2-2;Q2KJY2;Q9H5Z5;C9JFF0;B0I1R4;A0A8V8TM02;Q9ULI4 KIF26B;KIF26A Kinesin-like protein;Kinesin-like protein KIF26B;Kinesin-like protein KIF26A yes no 0 0 0 1 0 1 47.814 47.814 2 0.00070722 13477 20230619_1880_Aki_TMTPro18x_K_F1 126.24 102.47 73354 58323 72428 82012 72439 86258 88768 93029 99185 88328 122030 117450 113710 107020 113830 114470 117970 135450 67809 53591 73728 80914 75731 87013 88907 94449 101250 90415 123740 117630 116370 111100 115990 116090 112960 128370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80986000 30302 1040 28468 56876 45938 45938 1 9606 Homo sapiens -0.02783776352816858 VYEIPGLEPITFAGK Unmodified 1632.8763 0.87630962 4474 S4R369;Q9BZE1 MRPL37 39S ribosomal protein L37, mitochondrial yes no 0 0 0 1 0 1 63.902 63.902 3 0.032618 20123 20230619_1880_Aki_TMTPro18x_K_F1 47.532 33.374 9951.4 8815.5 8057.7 10096 10296 11734 10302 7584.7 12154 11973 12388 11768 10651 10168 9087.2 12341 11765 12732 9192 8079.9 8389.5 10107 10528 11649 10436 8163.1 12287 11866 12616 11901 10861 10652 9434.7 12379 11237 12085 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36844000 30303 4474 28469 56877 45939 45939 1 9606 Homo sapiens 0.08518651897384188 VYELQASR Unmodified 964.49779 0.49779495 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;H7C3A0;C9JHP4;C9K0Q7;B4DEH4 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 0 5.5 0.5 1 1 42.35 42.439 2 0.00099017 10507 20230619_1885_Aki_TMTPro18x_K_F5 151.5 110.19 303220 234300 243630 278830 307550 339040 328880 322680 420390 338590 359060 336770 373420 293130 322840 396180 408800 312970 279830 214940 253650 278720 315250 337910 333040 331160 420410 341470 371700 340710 378210 309240 334290 391630 389640 298490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 659930000 30304 2176 28470 56878;56879 45940;45941 45940 2 9606 Homo sapiens 0.01412596892100737 VYENYPTYDLTER Unmodified 1661.7573 0.7573167 3032 H0Y993;P35659;B4DFG0;A0A494C028;P35659-2;B4DNW3;A0A494C198;Q6MZJ9 DEK;DKFZp686A24118 Protein DEK yes no 0 0 0 3.5 0.5 1 1 53.072 53.131 2 2.0338E-12 15379 20230619_1883_Aki_TMTPro18x_K_F4 205.97 188.53 97667 79172 89187 93261 63976 82484 91715 85355 88736 119640 116750 125210 132820 119550 102500 163470 149900 164110 90239 72608 90963 92914 69279 84290 90824 87963 91816 119190 119210 126710 133700 125800 107720 163400 143060 155810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271800000 30305 3032 28471 56880;56881 45942;45943 45943 2 9606 Homo sapiens -0.047091667981248975 VYENYPTYDLTERK Unmodified 1789.8523 0.85227972 3032 H0Y993;P35659;B4DFG0;A0A494C028;P35659-2;B4DNW3;A0A494C198;Q6MZJ9 DEK;DKFZp686A24118 Protein DEK yes no 0 0 1 6 0 1 49.986 50.063 3 6.7122E-06 13949 20230619_1886_Aki_TMTPro18x_K_F6 119.31 103.37 89668 105850 82499 82628 81384 62135 75760 81119 65396 102290 94781 72419 106740 59307 76837 122610 110790 80780 83088 96642 84332 85245 84234 65033 76489 82114 68583 101220 96206 74575 106940 65064 80776 119700 105470 77279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37366000 30306 3032 28472 56882 45944 45944 1 9606 Homo sapiens -0.011052333269390147 VYESIGQYGGETVK Unmodified 1528.7409 0.74093835 2071 Q4VBP4;A8K5C5;Q8N3R9-2;Q8N3R9 MPP5 MAGUK p55 subfamily member 5 yes no 0 0 0 6 0 1 53.107 53.185 3 1.2269E-05 15264 20230619_1886_Aki_TMTPro18x_K_F6 119.96 101.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30307 2071 28473 56883 45945 45945 1 9606 Homo sapiens -0.002282479641962709 VYFDTENK Unmodified 1014.4658 0.46582612 2867;2868 E5KND5;Q96RP9;Q96RP9-2;C9IZ01;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 0 4.5 0.5 1 1 49.455 49.511 2 0.0042389 13791 20230619_1883_Aki_TMTPro18x_K_F4 117.04 72.589 83867 69856 79992 83567 92067 93769 93062 106670 109540 112100 118960 113580 130800 105040 99685 141900 129640 123680 77529 64067 81776 83433 94665 94365 94330 108160 111070 113020 122050 115040 131620 110590 103800 140860 123710 117690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125870000 30308 2867;2868 28474 56884;56885 45946 45946 1 9606 Homo sapiens -0.04082815581716659 VYFFGSGQPEK Unmodified 1257.603 0.60298831 1847 A0A8V8TPV5;A0A8V8TQZ3;Q8WWQ0;A0A8V8TQM4;A0A8V8TPK0;A0A8V8TP75 PHIP PH-interacting protein yes no 0 0 0 1 0 1 56.924 56.924 3 0.018338 17222 20230619_1880_Aki_TMTPro18x_K_F1 60.434 31.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30309 1847 28475 56886 45947 45947 1 9606 Homo sapiens -0.015509067021412193 VYFQSPPGAAGEGPGGADDEGPVR Unmodified 2329.0611 0.061103292 4331 Q96C90;A0A024R563 PPP1R14B Protein phosphatase 1 regulatory subunit 14B yes no 0 0 0 3 0 1 52.857 52.916 3 1.0803E-53 15428 20230619_1882_Aki_TMTPro18x_K_F3 188.73 182.57 22183 20105 25418 25989 20351 30835 29015 28749 31998 32594 27290 31605 33379 28557 29886 38208 32641 35464 20550 18448 25493 25825 21828 30739 28846 29613 32260 32705 28522 32019 33715 30066 30651 38061 31223 33703 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31917000 30310 4331 28476 56887 45948 45948 1 9606 Homo sapiens -0.05026481551476536 VYFQSPPGAAGEGPGGADDEGPVRR Unmodified 2485.1622 0.16221432 4331 Q96C90;A0A024R563 PPP1R14B Protein phosphatase 1 regulatory subunit 14B yes no 0 0 1 4.5 0.5 1 1 47.459 47.518 3 2.0882E-26 12796 20230619_1883_Aki_TMTPro18x_K_F4 172.27 158.54 197180 139480 178690 213650 187970 209540 205340 217820 212950 256110 246550 238070 240990 210790 226410 264610 236350 252140 182030 128360 183410 209500 195010 212300 206360 222950 218080 256110 251090 241600 245460 221160 231260 264240 226150 239550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 582670000 30311 4331 28477 56888;56889 45949;45950;45951 45949 3 9606 Homo sapiens -0.020960298487352702 VYGDIIHTPAK Unmodified 1212.6503 0.65027285 1585 A0A5F9ZI23;C9J8Q5;X5DQN2;X5D299;P51649;P51649-2;A0A5F9ZH98;A8K435 ALDH5A1 Succinate-semialdehyde dehydrogenase, mitochondrial yes no 0 0 0 8 0 1 47.912 47.97 3 0.039677 12674 20230619_1888_Aki_TMTPro18x_K_F8 48.004 30.272 83218 62631 73168 79539 75538 85596 77091 84589 98890 90840 84127 83458 85750 76031 91489 97959 91647 89376 76834 57498 75231 79015 78397 86064 78337 86627 98936 91263 87097 84825 87770 79814 92976 97594 87670 84989 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21566000 30312 1585 28478 56890 45952 45952 1 9606 Homo sapiens 0.0524537256885651 VYGPGVAK Unmodified 789.43849 0.43848916 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 0 3.67 3.09 1 1 1 43.801 43.806 2;3 0.009237 11777 20230619_1880_Aki_TMTPro18x_K_F1 77.674 31.956 98838 69353 84108 96944 136600 149480 122170 117150 164160 128220 152180 164310 140790 136550 134230 113570 159950 157110 91198 63754 87543 96250 137440 146400 125240 122200 164250 130200 156270 164100 143880 140520 137910 117030 152770 148780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 110520000 30313 3484 28479 56891;56892;56893 45953;45954;45955 45953 3 9606 Homo sapiens 0.035347456685599354 VYHPETGR Unmodified 957.46683 0.46682918 185 X6R3Q3;A0A024R235;Q5VYS8-4;Q5VYS8-6;Q5VYS8 ZCCHC6 Terminal uridylyltransferase 7 yes no 0 0 0 4 0 1 28.93 29 3 0.0099626 5230 20230619_1883_Aki_TMTPro18x_K_F4 69.954 49.624 10582 9563.9 12339 13302 16552 20683 14634 18673 17806 15611 18166 18459 19275 16254 15560 12569 22242 16911 9804.5 8782.7 12461 13217 16827 20294 14974 19114 17971 16030 18667 18526 19464 16651 16236 12947 21180 16035 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2255300 30314 185 28480 56894 45956 45956 1 9606 Homo sapiens -0.013605564221506938 VYIYSSGSVEAQK Unmodified 1429.7089 0.70890994 4174 Q7Z508;Q9UHY7;D6RA00;Q9UHY7-2 ENOPH1 Enolase-phosphatase E1 yes no 0 0 0 7.5 0.5 1 1 50.645 50.724 3 3.1168E-05 13792 20230619_1888_Aki_TMTPro18x_K_F8 116.03 101.46 84292 68988 93172 85520 72717 81621 94867 87732 96241 113550 111000 103150 122730 101990 101050 130710 121980 116610 78011 63298 93560 84999 77708 82982 94449 89914 98641 113030 113640 105210 123850 106770 104450 130020 116470 110930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 336430000 30315 4174 28481 56895;56896 45957 45957 1 9606 Homo sapiens 0.011243843526926867 VYLGALK Unmodified 762.46398 0.46397563 1863 A0A994J491;Q6P2Q9;A0A994J6E8;I3L3Z8 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 3 0 1 54.713 54.759 2 0.00083224 16249 20230619_1882_Aki_TMTPro18x_K_F3 130.84 27.428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30316 1863 28482 56897 45958 45958 1 9606 Homo sapiens 0.07324220190992037 VYLLYRPGHYDILYK Unmodified 1912.0247 0.024705193 4350 Q96FW1;Q659F9;F5H6Q1;B4DPD5;F5GYN4;F5H3F0;B3KUV5;Q96FW1-2;B4E053 OTUB1;DKFZp564E242 Ubiquitin thioesterase OTUB1 yes no 0 0 1 5 0 1 58.026 58.082 4 1.021E-13 17133 20230619_1885_Aki_TMTPro18x_K_F5 151.9 125.78 92661 89913 96881 94807 68907 84550 88803 80688 97554 90502 77264 72718 80607 72610 107430 91634 86880 73126 85813 82324 97633 95269 74378 86221 88682 83014 98090 90428 80419 74644 83458 75880 107540 90807 83230 69702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102810000 30317 4350 28483 56898 45959 45959 1 9606 Homo sapiens 0.10517382871148584 VYLQNEYK Unmodified 1055.5288 0.52876073 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HI40;A0A804HIQ7;A0A804HHY9;B4DSR0;A0A804HJH8;B8ZZ38;C9JCA9;A0A804HK02;A0A804HIV5;A0A0C4DG06;A0A804HKX0;A0A804HKR5 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 7 0.707 1 2 1 48.438 48.518 2;3 0.00062584 12885 20230619_1887_Aki_TMTPro18x_K_F7 130.27 97.431 357010 262790 295430 336350 324640 389670 376180 369210 467820 389990 426650 436390 458860 439970 409780 462360 455930 400510 329440 241300 305990 334270 336810 389400 379030 379170 469500 394700 441140 441120 465340 454530 420370 460770 435400 381260 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 867780000 30318 1723 28484 56899;56900;56901;56902 45960;45961;45962 45961 3 9606 Homo sapiens 0.00321750206330762 VYMNQVCDDTITSR Unmodified 1700.7498 0.74980525 719 A0A024RCF9;A8K5B0;Q9UH62 ARMCX3 Armadillo repeat-containing X-linked protein 3 yes no 0 0 0 4 0 1 49.3 49.338 2 0.010267 13667 20230619_1883_Aki_TMTPro18x_K_F4 85.288 78.082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30319 719 28485 56903 45963 45963 1 9606 Homo sapiens -0.07253965661675466 VYNASSTIVPSLK Unmodified 1377.7504 0.75038083 2983 F8VZ44;Q53HS1;Q9NRG9;H3BU82 AAAS Aladin yes no 0 0 0 3 0 1 56.506 56.542 3 4.9492E-05 16990 20230619_1882_Aki_TMTPro18x_K_F3 94.551 66.254 61857 49331 56172 61217 55611 65917 63440 61432 73042 66776 75928 70079 74988 65562 69358 78293 78460 81769 57145 45267 57562 60905 58077 66186 63815 63226 73952 67322 77684 70885 76313 68450 71180 78641 75004 77616 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47641000 30320 2983 28486 56904 45964 45964 1 9606 Homo sapiens 0.07661565111993696 VYNEAGVTFT Unmodified 1099.5186 0.51858998 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;P00367-3;B3KT18;A0A804HKE0;P00367-2;Q14400;Q9UQV0 GLUD1 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase yes no 0 0 0 3.5 0.5 1 1 57.348 57.367 2 0.0063462 17207 20230619_1883_Aki_TMTPro18x_K_F4 87.181 71.742 65577 63908 65721 72348 69203 76794 68430 76647 95552 73860 77510 72885 81484 72474 82591 86491 82321 88313 60711 58550 66837 72446 71637 77329 69898 78219 95032 74818 80525 74074 83119 75509 83973 86783 78809 83839 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200690000 30321 2542 28487 56905;56906 45965 45965 1 9606 Homo sapiens -0.027188575189029507 VYNENLVHMIEHAQK Oxidation (M) 1839.8938 0.89376737 2250 Q53HE3;B2R7W3;O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes no 0 1 0 6 0 1 47.851 47.931 4 4.937E-14 13015 20230619_1886_Aki_TMTPro18x_K_F6 185.26 158.83 55470 46792 46372 54530 50307 59747 57200 54883 68398 64798 59486 51992 60133 48731 58228 60701 58820 107630 51232 42902 47980 54499 52198 59909 57605 56670 68702 64585 61434 53267 61246 51129 59309 63390 56611 101550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97378000 30322 2250 28488 56907 45966 45966 1398 1 9606 Homo sapiens 0.007416241607870688 VYNENLVHMIEHAQK Unmodified 1823.8989 0.89885275 2250 Q53HE3;B2R7W3;O75934 BCAS2 Pre-mRNA-splicing factor SPF27 yes no 0 0 0 7 0 1 53.216 53.287 4 2.2293E-33 15051 20230619_1887_Aki_TMTPro18x_K_F7 258.16 234.68 69008 58479 62480 70574 61674 73885 72787 74618 86059 86080 77322 76327 87409 79639 76681 89651 89227 91373 63774 53634 64059 70325 64499 74470 73158 76475 86614 86099 80177 78044 88433 82566 78926 89993 85266 86760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 412750000 30323 2250 28488 56908 45967 45967 1 9606 Homo sapiens 0.01985928023418637 VYNIEFNPPK Unmodified 1219.6237 0.62372375 4173 Q7Z4Y4;Q9UIJ7;Q7Z531;B3KWD9;Q9UIJ7-2;Q9UIJ7-3 AK3 GTP:AMP phosphotransferase AK3, mitochondrial yes no 0 0 0 4.5 3.5 1 1 56.677 56.705 3 0.0035142 17135 20230619_1880_Aki_TMTPro18x_K_F1 73.067 56.842 74866 65213 79269 76775 81461 91998 88556 81252 104060 71115 72734 73271 80407 67284 83539 77107 80848 77296 69288 59790 80183 76801 84649 91629 89329 83502 103790 72561 76465 74101 81974 70129 84705 77367 77356 73427 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 87503000 30324 4173 28489 56909;56910 45968;45969 45968 2 9606 Homo sapiens 0.0226968367749123 VYNVTQHAVGIVVNK Unmodified 1639.9046 0.90459006 3593 Q6IAX2;P46778;M0R181;G3V1B3;Q59GK9 RPL21 60S ribosomal protein L21 yes no 0 0 0 4 0 1 53.63 53.649 3 0.00080832 15646 20230619_1883_Aki_TMTPro18x_K_F4 78.486 67.224 165440 85929 236790 252940 121490 107760 90753 224870 191190 159950 87259 131590 195510 115970 167750 258780 197260 148840 153170 80105 232800 239620 134340 122430 96989 219700 185180 164120 99461 134510 194570 127770 173180 251300 188120 142710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 930160000 30325 3593 28490 56911 45970 45970 1 9606 Homo sapiens 0.11023394597350489 VYNWDVK Unmodified 922.45487 0.45486751 2835 Q6FH24;D3DWY7;P61758-2;P61758 VBP1 Prefoldin subunit 3 yes no 0 0 0 7.5 0.5 1 1 53.324 53.395 2 0.0056882 15084 20230619_1887_Aki_TMTPro18x_K_F7 138.9 87.207 573330 488440 555350 539410 541490 635570 631670 585540 646940 770600 731170 730150 802180 630610 743290 783690 836510 754170 530140 447600 565410 542070 566190 634350 632230 606600 662290 767430 749420 739560 813340 662140 762180 783360 798900 716930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 789560000 30326 2835 28491 56912;56913 45971;45972 45971 2 9606 Homo sapiens -0.009461731653459537 VYNYNHLMPTR Oxidation (M) 1422.6714 0.671419 166 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7 RPL27 60S ribosomal protein L27 yes no 0 1 0 2.5 0.5 1 1 39.049 39.11 3 1.7533E-06 9367 20230619_1881_Aki_TMTPro18x_K_F2 151.79 134.76 399270 308350 353580 403550 423190 391450 435180 408720 452950 339520 375360 287960 356980 277830 381160 429270 361110 284550 368710 283140 364250 399520 433840 397310 438520 414650 456990 345460 387500 295020 365910 294850 386310 420730 345180 272080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1018999999.9999999 30327 166 28492 56914;56915 45973;45974 45973 103 2 9606 Homo sapiens -0.023009853939811364 VYNYNHLMPTR Unmodified 1406.6765 0.67650438 166 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7 RPL27 60S ribosomal protein L27 yes no 0 0 0 3.5 0.5 1 1 44.654 44.713 3 1.4224E-12 11559 20230619_1883_Aki_TMTPro18x_K_F4 206.27 183.69 352510 275760 339430 331000 300290 375330 349310 361560 376260 292070 274020 261510 327970 235860 327710 362810 325470 243360 325770 252980 345300 330420 316700 375740 350290 368420 377570 298090 288350 266310 332780 250880 333280 355790 310870 232710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1060099999.9999999 30328 166 28492 56916;56917 45975;45976 45976 2 9606 Homo sapiens -0.010566815313495681 VYPSSLSK Unmodified 879.47018 0.47018322 2126 A8K8U1;Q86VP6;Q86VP6-2;A0A0C4DGH5 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 1.5 0.5 1 1 46.955 46.993 2 0.0024193 13031 20230619_1881_Aki_TMTPro18x_K_F2 127.02 47.424 522320 372510 503990 466740 631660 674870 605110 540510 663860 502790 488380 354240 427610 341910 574010 491410 531470 379270 482440 342010 515190 466340 645170 663560 613200 560390 665640 506130 506130 366570 445240 361080 578260 485440 507870 361980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 260780000 30329 2126 28493 56918;56919 45977 45977 1 9606 Homo sapiens 0.02562693631853108 VYPVSVPYSSAQSTSK Unmodified 1698.8465 0.84646606 4025 Q59FT7;B7Z9N9;B7Z3S5;A8K6K3;Q15750-2;Q15750 MAP3K7IP1;TAB1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 yes no 0 0 0 2.5 0.5 1 1 52.692 52.725 3 2.1516E-08 15637 20230619_1881_Aki_TMTPro18x_K_F2 136.17 118.89 21408 17227 19580 22178 19458 23856 21099 21625 23838 21779 22651 22445 22649 19101 22551 23063 23370 22564 19779 15813 20058 22007 20291 23937 21269 22253 24079 22026 23298 22645 23110 20023 22980 23085 22347 21440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33179000 30330 4025 28494 56920;56921 45978;45979 45978 2 9606 Homo sapiens 0.024996681614311456 VYPYLCR Unmodified 969.47422 0.47422274 3892 Q4ZG57;Q14566 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 3 0 1 48.298 48.377 2 0.024225 13419 20230619_1882_Aki_TMTPro18x_K_F3 99.511 82.956 581180 546490 512760 510040 520350 763770 552920 613740 781720 266440 257980 259420 266880 263870 397250 273820 327610 277210 537380 499920 526880 521740 542900 749340 562490 627790 760860 288830 290020 264150 278780 272430 397090 275630 313780 263440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 327480000 30331 3892 28495 56922 45980 45980 1 9606 Homo sapiens -0.011735401460782668 VYQGLYCVAIR Unmodified 1340.6911 0.69109181 3908 Q15008;Q15008-4;B3KT66;Q15008-3;Q15008-2;C9J0E9;H7C531 PSMD6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 4 0 1 56.787 56.793 2 2.819E-06 16976 20230619_1883_Aki_TMTPro18x_K_F4 199.68 169.51 82047 59263 71074 73957 67399 75843 79841 83277 92734 76399 63135 58264 70685 56390 56724 100670 90545 66081 75727 54406 73076 73525 70684 76713 80179 84357 92553 77050 66457 60010 71279 60549 60029 98380 86136 63220 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 158690000 30332 3908 28496 56923 45981 45981 1 9606 Homo sapiens 0.0343739061679571 VYQHQVVANCR Unmodified 1372.667 0.66700232 2836 D3DXC9;Q53ET7;P34896-2;P34896;P34896-4 SHMT1 Serine hydroxymethyltransferase;Serine hydroxymethyltransferase, cytosolic yes no 0 0 0 8 0 1 32.244 32.25 3 0.0024447 6430 20230619_1888_Aki_TMTPro18x_K_F8 80.24 65.821 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30333 2836 28497 56924 45982 45982 1 9606 Homo sapiens -0.004424498168418722 VYQLGGTR Unmodified 892.47667 0.47666558 3122 Q92541;I7GPQ7 RTF1 RNA polymerase-associated protein RTF1 homolog yes no 0 0 0 1.5 0.5 1 1 41.202 41.24 2 0.032627 10632 20230619_1880_Aki_TMTPro18x_K_F1 77.732 57.946 67166 46416 57854 65180 91318 99064 80868 81579 107730 69438 82101 85356 77927 72643 80890 68502 100340 91010 61975 42674 60097 64684 91980 97174 82923 84201 107080 71404 85289 85481 79886 75131 83198 70211 95753 86237 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89707000 30334 3122 28498 56925;56926 45983 45983 1 9606 Homo sapiens 0.02612631583235725 VYQSLCPTSWVTDWDEQR Unmodified 2269.011 0.010981977 3453 P14854 COX6B1 Cytochrome c oxidase subunit 6B1 yes yes 0 0 0 6.5 0.5 1 1 63.642 63.681 3 1.0454E-09 19529 20230619_1887_Aki_TMTPro18x_K_F7 135.27 120.12 65065 64747 64989 76352 63026 72442 77902 78832 83484 83071 73439 74439 87880 86510 81978 81492 84675 89472 60245 59338 66075 76111 66033 73702 77858 80210 84376 83479 76479 76355 89036 88551 83609 82436 81023 84879 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 149850000 30335 3453 28499 56927;56928 45984;45985 45985 2 9606 Homo sapiens -0.07276307480924515 VYQVFESVAK Unmodified 1168.6128 0.61282471 4033 Q5HYK3;B4DP72 COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial yes no 0 0 0 1 0 1 61.411 61.411 2 0.013884 19037 20230619_1880_Aki_TMTPro18x_K_F1 80.231 56.674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30336 4033 28500 56929 45986 45986 1 9606 Homo sapiens 0.035262813032204576 VYQWDDPDPR Unmodified 1289.5677 0.56766543 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 2.5 1.12 1 1 1 1 49.758 49.803 2 0.00018482 14324 20230619_1881_Aki_TMTPro18x_K_F2 138.66 120.35 281470 227410 270720 249710 178250 235350 226540 237050 246530 359970 359570 345280 369660 309030 307880 381590 365240 364900 260170 208420 274380 250350 194110 239150 226560 245330 254970 356550 363870 349960 373970 323830 317740 381150 348900 346760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 929510000 30337 3606 28501 56930;56931;56932;56933 45987;45988;45989 45987 3 9606 Homo sapiens -0.06553569229959066 VYRDDIGR Unmodified 992.50394 0.50394297 853 Q96CW1;Q96CW1-2;A0A087WY71;B4E304;B4DJB1;C9JJD3;H7C4C3;C9JTK4;A0A8I5KWD3;A0A8I5QJU5;C9JJ47;A0A8I5KT55 AP2M1 AP-2 complex subunit mu yes no 0 0 1 4.5 0.5 1 1 34.086 34.155 3 0.00618 7179 20230619_1883_Aki_TMTPro18x_K_F4 91.783 60.553 189080 146350 190640 198140 221550 188070 206770 221030 228780 223220 269830 243330 254940 213770 228850 247010 286850 238550 174790 134440 193960 195740 226840 191820 210130 223570 233420 226030 274060 245260 259430 223230 236440 247190 273560 226840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 210470000 30338 853 28502 56934;56935 45990;45991 45990 2 9606 Homo sapiens 0.007391151236220139 VYSCDLTTLVK Unmodified 1297.6588 0.65878863 1386 P15882;P15882-3;A0A2X0SFY7;Q59EM3;P15882-2;A0A494C1M7;A0A494C0C9;C9J3G1;Q6IBE0;F8W6K2;A0A494C1R0;B8ZZ96;C9J3V9;C9JR98;A0A494C047 CHN1 N-chimaerin yes no 0 0 0 1 0 1 58.891 58.891 3 0.00027829 18052 20230619_1880_Aki_TMTPro18x_K_F1 104.52 84.194 41296 31266 42094 38807 33491 42357 39895 42433 44754 49506 45263 47937 58740 46872 38961 60291 55811 67401 38174 28696 42548 38634 35683 42552 40034 43522 45385 49599 47003 48710 58577 49129 41017 60695 53317 63900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41003000 30339 1386 28503 56936 45992;45993 45992 2 9606 Homo sapiens 0.021865584231363755 VYSLDDIRR Unmodified 1135.5986 0.59857163 3892 Q4ZG57;Q14566 MCM6 DNA replication licensing factor MCM6 yes no 0 0 1 7 0.816 1 1 1 44.377 44.428 3 2.6593E-12 11055 20230619_1887_Aki_TMTPro18x_K_F7 204.91 144.98 299030 238450 257290 268450 234270 274100 263830 264950 284650 307360 298550 255260 305280 244240 263650 318690 288360 258740 276140 218600 264550 268810 246190 276580 265060 272440 289530 306740 305630 261310 309270 256270 270490 315570 275460 246500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 932780000 30340 3892 28504 56937;56938;56939 45994;45995;45996 45995 3 9606 Homo sapiens 0.03619628874935188 VYSLFLDESR Unmodified 1227.6136 0.61355299 4699 Q9Y230;B3KNL2;Q9Y230-2 RUVBL2 RuvB-like 2 yes no 0 0 0 6 0 1 62.044 62.096 2 0.0098096 19028 20230619_1886_Aki_TMTPro18x_K_F6 82.831 57.908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30341 4699 28505 56940 45997 45997 1 9606 Homo sapiens 0.008850759522601948 VYSTSVTGSR Unmodified 1055.5247 0.52473799 2808 Q5T123;Q86Z22;D3DPK5;Q9H299 SH3BGRL3;HEL-S-297 SH3 domain-binding glutamic acid-rich-like protein 3 yes no 0 0 0 6 2.92 1 1 2 37.588 37.605 2 5.6721E-19 8493 20230619_1888_Aki_TMTPro18x_K_F8 243.33 201.37 258770 162680 247850 299810 463630 496200 416340 412390 481670 344430 396480 415860 412000 353920 347970 268110 488680 412910 238840 150170 256320 293680 463170 484640 424230 425110 483250 354220 411560 416550 417150 362770 362210 279230 465680 390930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 447270000 30342 2808 28506 56941;56942;56943;56944 45998;45999;46000;46001 46000 4 9606 Homo sapiens -0.0008033928738768736 VYSVLSDR Unmodified 937.4869 0.48689592 50 Q8WXX5;A0A024QZN2 DNAJC9;hCG_2024613 DnaJ homolog subfamily C member 9 yes no 0 0 0 6.5 0.5 1 1 48.343 48.426 2 0.00044287 12855 20230619_1887_Aki_TMTPro18x_K_F7 163.9 136.93 412520 326520 339310 395980 362800 483280 404500 369960 490640 435900 424680 380470 444390 341620 365510 481970 469190 406380 380810 299560 351570 395180 377080 479290 407960 387640 492270 435590 439290 387710 449070 361210 379400 477500 447480 387010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 322340000 30343 50 28507 56945;56946 46002 46002 1 9606 Homo sapiens 0.015651945178206006 VYSYALALK Unmodified 1026.575 0.57498264 1968 A6NFX8;Q9UKK9 NUDT5 ADP-sugar pyrophosphatase yes no 0 0 0 3 0 1 60.502 60.531 3 0.0033805 18631 20230619_1882_Aki_TMTPro18x_K_F3 81.594 51.34 19056 19181 15592 14492 18600 23256 22069 15524 23456 11010 11146 11010 9704.7 8274 12373 13556 14620 8493.5 17619 17517 16173 15154 19203 22687 22063 16288 23283 11402 11960 11096 10089 8894.9 12663 13252 13924 8143.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3628400 30344 1968 28508 56947 46003 46003 1 9606 Homo sapiens 0.06275815108392635 VYSYFECR Unmodified 1122.4804 0.48043033 426 P43490;A0A024R718;A0A7P0T9I9;A0A7P0T895;A0A7P0T8L3;A0A7P0T973;A0A7P0TAS5;A0A7P0T8D2;A0A0C4DFS8;A0A7P0TA73;A0A7P0TBB7;A0A7P0T941;A0A7P0Z466;A0A7P0Z4N0;A0A7P0T9F0;A0A7P0TB17;A0A7P0T8Z3;A0A7P0T8R4;A0A7P0TAI8;A0A7P0Z4L4;C9JG65;C9JF35;A0A7P0TAZ2 NAMPT;PBEF1 Nicotinamide phosphoribosyltransferase yes no 0 0 0 7.5 0.5 1 1 52.421 52.497 2 0.00014803 14612 20230619_1888_Aki_TMTPro18x_K_F8 173.68 150.12 337330 248150 268760 306510 265210 326340 294060 278030 376700 270630 265930 249850 272400 211900 298130 322470 309740 290410 311200 227770 278910 304950 277120 327310 297300 287290 374360 273540 278310 253520 278990 225750 303480 320390 296110 276240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149440000 30345 426 28509 56948;56949 46004 46004 1 9606 Homo sapiens -0.07591066705231242 VYTDVNTHRPR Unmodified 1356.6898 0.68984625 1352 Q5U5J2;P68400;A0A2R8Y5A0;B2R6D7;E7EU96;Q2I0Y7;A0A2R8YD58;A0A2R8YFU2;B5BUH5;A0A2R8YF43;A0A2R8YDP2;Q8NEV1;A0A2R8Y4D6;A0A2R8YDY7;A0A2R8Y4H0;A0A2R8YEW1;V9GYA2;A0A2R8Y7T1;A0A2R8YCK2;A0A2R8YF47;V9GY80;A0A2R8YEL7;A0A2R8Y797;A0A2R8Y3W6;A0A2R8YCC9 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 yes no 0 0 1 5.33 3.09 1 1 1 31.036 31.072 4 0.00014699 6410 20230619_1880_Aki_TMTPro18x_K_F1 128.01 104.79 64985 51573 63088 57382 65580 71005 69834 68574 81719 78879 88382 84450 84475 80172 70543 98542 105300 85485 60064 47276 64247 57689 68041 70731 70547 70486 82830 79352 90149 85387 85773 83747 74044 97924 100280 81405 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 265280000 30346 1352 28510 56950;56951;56952 46005;46006 46005 2 9606 Homo sapiens 0.025768925722559288 VYTLDGHCVACHR Unmodified 1586.7082 0.70821521 491 A0A024R843;Q13049 TRIM32 E3 ubiquitin-protein ligase TRIM32 yes no 0 0 0 7 0 1 36.895 36.96 4 2.7238E-06 8057 20230619_1887_Aki_TMTPro18x_K_F7 138.75 125.55 18167 16544 14842 15165 14272 16000 15979 17111 20217 15604 16351 18438 20023 12536 17607 18656 18440 18553 16785 15134 15346 15456 14933 16153 16146 17362 20191 15939 17133 18389 20176 13467 17998 18639 17636 17623 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11468000 30347 491 28511 56953 46007 46007 1 9606 Homo sapiens -0.06167056839672114 VYTLSVSGDR Unmodified 1095.556 0.55603812 1173 J3QT28;A0A140VJF3;O43684-2;O43684;B4DDM6 BUB3 Mitotic checkpoint protein BUB3 yes no 0 0 0 7 0.816 1 1 1 47.054 47.127 2 2.1122E-26 12229 20230619_1887_Aki_TMTPro18x_K_F7 280.85 240.07 511630 432610 442190 532660 520110 537620 499230 491570 567690 614260 590190 575290 669950 554920 550930 627920 655360 586780 472660 396850 456610 529650 533470 542390 506760 508760 575890 613060 607780 585080 675520 577020 568460 627380 625560 558010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 523920000 30348 1173 28512 56954;56955;56956 46008 46008 1 9606 Homo sapiens 0.012082337467290927 VYTPSNADIGLR Unmodified 1304.6725 0.67246486 2977 F6T1Q0;Q6L8Q7-2;Q6L8Q7 PDE12 2',5'-phosphodiesterase 12 yes no 0 0 0 7 0 1 49.42 49.504 2 6.4744E-18 13352 20230619_1887_Aki_TMTPro18x_K_F7 227.94 195.62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30349 2977 28513 56957 46009 46009 1 9606 Homo sapiens 0.0323155224657512 VYVGNLGNNGNK Unmodified 1247.6258 0.62584901 2236 B2R6F3;P84103-2;P84103;A0A087X2D0 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 yes no 0 0 0 1.5 0.5 1 1 46.975 47.013 3 0.00084832 13064 20230619_1881_Aki_TMTPro18x_K_F2 90.05 75.36 193850 141730 184190 192080 243400 262430 242480 214400 298900 227770 265950 252480 276820 235550 260510 247700 249560 268280 179060 130220 188870 190690 248160 258900 246140 222750 299760 230460 274800 254680 281380 244200 264520 249940 239010 254530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166540000 30350 2236 28514 56958;56959 46010 46010 1 9606 Homo sapiens 0.011941124153509008 VYVGNLGTGAGK Unmodified 1134.6033 0.60332266 981 A0A0B4J1Z1;B4DEK2;C9JAB2;Q16629-3;Q16629-2;Q16629-4;Q16629;Q8NB80 SRSF7 Serine/arginine-rich splicing factor 7 yes no 0 0 0 2.5 0.5 1 1 49.695 49.762 3 0.00017724 14019 20230619_1882_Aki_TMTPro18x_K_F3 100.93 81.799 127370 89198 127000 131920 128930 151950 134830 135390 171030 181020 165310 172860 193100 158470 150010 183810 193680 185920 117670 82052 129110 129920 134060 151690 136750 140660 172100 180270 171100 175300 194150 165330 155880 184330 184840 176600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1948199999.9999998 30351 981 28515 56960;56961 46011 46011 1 9606 Homo sapiens 0.041405130177281535 VYVGNLGTGAGKGELER Unmodified 1718.8951 0.89514758 981 A0A0B4J1Z1;B4DEK2;C9JAB2;Q16629-3;Q16629-2;Q16629-4;Q16629;Q8NB80 SRSF7 Serine/arginine-rich splicing factor 7 yes no 0 0 1 4.5 3.5 1 1 48.338 48.371 3 1.9904E-13 12823 20230619_1888_Aki_TMTPro18x_K_F8 156.5 134.3 197310 183410 180310 142250 195480 164130 201040 177970 128690 171340 179230 125150 173790 112270 181030 150920 128600 96608 182470 167570 184510 147660 201420 164970 200220 180680 137430 171960 181010 128900 177530 118400 180890 148140 123330 92452 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 435810000 30352 981 28516 56962;56963 46012;46013 46013 2 9606 Homo sapiens 0.06445581521188615 VYVGSIYYELGEDTIR Unmodified 1875.9254 0.92544466 1044 A0A0J9YVP6;Q9UHX1-2;Q9UHX1-4;Q9UHX1-6;E9PQ56;A0A0J9YYL3;Q9UHX1-3;Q9UHX1;Q9UHX1-5;A0A994J6L7;H0YEM1;A0A0J9YXX5;E9PL19;A0A0J9YXJ8;A0A0J9YVR6;A0A0J9YWM1;E9PN18;E9PMU7;A0A0J9YXC6 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 0 0 0 5.5 0.5 1 1 62.958 63.006 2 4.2637E-42 19306 20230619_1885_Aki_TMTPro18x_K_F5 346.79 319.67 61779 50465 52866 69930 48290 62992 63142 62176 71785 64938 65974 69568 77708 74561 67986 79868 74363 75118 57056 46358 54494 68892 51024 64167 63068 63684 72397 65653 68504 70598 78540 76979 69721 79886 71094 71395 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 271780000 30353 1044 28517 56964;56965 46014 46014 1 9606 Homo sapiens 0.02251895395693282 VYVIGSFVDK Unmodified 1125.607 0.60701105 4150 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 0 0 0 1.67 0.471 1 2 61.73 61.737 2;3 8.3052E-05 19355 20230619_1881_Aki_TMTPro18x_K_F2 161.92 115.35 299630 223500 271800 312690 291790 340060 327700 346580 338930 342990 326620 346210 380370 302250 335680 378220 373450 402310 276690 205410 279000 308720 302630 341800 328750 353450 344340 346850 338210 349830 384270 317410 344450 380060 357150 381760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 654410000 30354 4150 28518 56966;56967;56968 46015;46016 46015 2 9606 Homo sapiens 0.04923182791549152 VYVVEGSK Unmodified 879.47018 0.47018322 3318 O75844;B3KNM6 ZMPSTE24 CAAX prenyl protease 1 homolog yes no 0 0 0 6 0 1 46.268 46.351 2 0.0010683 12283 20230619_1886_Aki_TMTPro18x_K_F6 121.62 65.608 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30355 3318 28519 56969 46017 46017 1 9606 Homo sapiens 0.025626936318644766 VYWNDGLDQYR Unmodified 1427.647 0.64697839 3250 O43252;Q05BW9;Q4W5H3 PAPSS1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 5.5 0.5 1 1 55.649 55.719 2 1.0478E-16 16330 20230619_1886_Aki_TMTPro18x_K_F6 228.64 215.6 186290 158520 189210 188980 197300 275220 216360 205170 251940 314540 291720 292510 360030 282790 284420 380810 338040 349810 172320 145360 192170 189450 205290 270030 218170 217290 256640 311360 300370 297700 361550 297310 294040 379070 323000 332540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 196760000 30356 3250 28520 56970;56971 46018;46019 46019 2 9606 Homo sapiens -0.04973922275826226 VYYEHLEK Unmodified 1079.5288 0.52876073 3315 O75691 UTP20 Small subunit processome component 20 homolog yes yes 0 0 0 5 0 1 43.748 43.829 3 0.00067391 11139 20230619_1885_Aki_TMTPro18x_K_F5 130.75 68.785 105400 78235 94108 108250 116590 125510 118910 107630 125210 129240 139220 129850 143610 112140 116260 153250 142650 126830 97318 71894 96964 107030 119380 125190 119940 111810 127800 129480 142280 131270 145070 118440 120360 151760 136120 120800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89536000 30357 3315 28521 56972 46020 46020 1 9606 Homo sapiens -0.007822497936786021 VYYVSEK Unmodified 886.44363 0.44363412 4698 Q9Y221;J3QLW7;B3KM49;Q9Y221-2 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog yes no 0 0 0 6.5 0.5 1 1 47.049 47.134 2 0.047565 12284 20230619_1887_Aki_TMTPro18x_K_F7 91.906 50.919 125130 114750 148420 141600 162390 161070 149220 145740 155390 196870 188920 149990 156500 130790 179760 130780 168560 161180 115970 105240 148970 141080 166990 161110 151500 151280 159500 194720 190620 153700 161790 135670 181490 133290 161330 152790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102390000 30358 4698 28522 56973;56974 46021 46021 1 9606 Homo sapiens -0.0041299525947806615 VYYYNAR Unmodified 947.45012 0.45011648 1699 A0A7P0T8N8;O14776-2;O14776;G3V220;B7Z921 TCERG1 Transcription elongation regulator 1 yes no 0 0 0 2 0 1 41.788 41.865 2 0.019927 10652 20230619_1881_Aki_TMTPro18x_K_F2 114.6 94.96 175570 126810 155110 177310 193890 205710 176210 177650 220990 137770 141220 103400 117820 93834 169530 129860 152990 109140 162070 116560 159960 175200 197910 205180 180030 182360 219180 140520 147470 106400 123440 99048 170330 128890 146230 104040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99937000 30359 1699 28523 56975 46022 46022 1 9606 Homo sapiens -0.025710573081141774 WAAVVVPSGEEQR Unmodified 1426.7205 0.72047768 1147 E3UN97;A0A2I6J4B1;A0A1W1B5Q9;A0A1W1B5P4;A0A1D8MAR2;A0A455JTQ2;A0A1D3KYM1;A0A173ADK6;A0A0U5PXQ4;A0A7D5H2K1;A0A7R9KAH2;A0A7R9PSR9;A0A0S4XQY3;A0A4P2SS15;A0A4P2SSH9;A0A6B7FUX4;A0A6B7HGN6;A0A6B9MMF8;A0A6C0SH12;A0A6M4AA77;A0A2U3QLK0;A0A5H2UEZ4;A0A858LHP1;A0A2H4WPZ2;A0A1B1LKE5;A0A2P9FIJ6;Q95J07;A0A858LHN0;A0A7U3K2K7;A0A3G2LWQ6;A0A858BAV0;A0A060VD08;A0A060VHC2;A0A060VHD0;A0A858LHP8;A0A7S5GS05;A0A7S5GRV6;A0A7U3L8N8;A0A0D6K972;A0A7S5L7I4;A0A7T3P0T0;A0A1C3PHF4;A0A0S4XQW9;A0A0U5Q0S0;A0A7U3K2N3;A0A0S4XQY0;A0A1C3PH97;A0A1C3PH98;A0A1C3PHA9;A0A1C3PHC8;A0A1G4HQ08;A0A0S4XQX0;A0A858B942;A0A2U3QLP6;A0A7T3RIS7;A0A0N9HRK5;A0A7U3L8C6;A0A0U5Q1Q2;A0A0S4XQU8;A0A060VD16;A0A0D6K9K6;A0A0S2IKY1;A0A7U3K2H5;A0A0S4XQM2;A0A0S4XQP0;A0A0S4XQR6;A0A0K0TQ18;A0A7U3K2H2;A0A1C3PH91;A0A0S4XQR9;A0A7U3K2F1;A0A1C3PHH2;A0A7U3K2H0;A0A7U3K2G2;A0A7U3K2G0;A0A3G1Z2Q6;A0A7U3K2F2;A0A7U3K2I5;A0A0S4XQT2;A0A7U3K2B1;A0A0S4XQV7;A0A1C3PHF2;A0A1D0BSQ3;A0A1G4HPZ1;A0A1D3KYL9;A0A6C0SED3;A0A060VCY5;A0A7U3L8D9;A0A6C0SEA7;A0A6B9WHU5;A0A6B9WFF6;A0A6B9VUB6;A0A6B9KHB8;A0A0S4XRV2;A0A0U5PZ31;A0A858B8J5;A0A858B907;A0A7U3L8P7;A0A6B9KGV8;A0A3S6RI33;A0A3S6RI04;A0A858B925;A0A858B842;A0A6B9KNP2;A0A6B9VR84;X5MFD7;A0A6B9KAI8;A0A6B7HG58;A0A6B7HFR9;A0A6C1HWN0;A0A6C1HWM2;A0A6C1HWG8;A0A7U3L8N4;A0A6C1HWG5;A0A858B763;A0A7U3K2M4;A0A090KKC3;A0A7U3VI76;A0A6C1HWE5;A0A6C0VB37;A0A6C0TKS0;A0A6C0SGG6;A0A3S6RHQ5;A0A0S4XQX6;A0A6B9KFK9;A0A1G4HPZ0;A0A6S7YB88;A0A0S4XQY1;A0A1G4HPV3;A0A286RNI7;A0A1G4HPU6;A0A0U5Q331;A0A1D0C3Y2;A0A1G4HPY8;A0A0U5PU71;A0A1G4HPW4;A0A1D8MAN8;A0A1C3PHG3;A0A1C3PHG8;A0A1D8MAL2;A0A858B927;A0A1D3KYM2;A0A0U5PXI8;A0A0U5KK56;A0A0U5PYZ0;A0A0S4XRG6;A0A0U5PXL2;A0A0S4XR94;A0A858B956;A0A858LFL1;A0A858LGA7;A0A0S4XR96;A0A0S4XRD4;A0A858LGC0;A0A858LGT7;A0A0S4XRI5;A0A0S4XRI6;A0A0U5PXM5;A0A0S4XRT2;A0A0S4XRW0;A0A0U5IHK3;A0A0U5IHQ3;A0A2U3QLM4;A0A1L5LC12;A0A6B7KV80;A0A2P9FIN2;Q8SNC6;M4RMN4;M4R8V8;M4R8T6;D8MIW0;A0A286LDB0;A0A286RNH0;A0A090JY51;A0A286RNH2;A0A286RNH6;A0A286RNH9;A0A291HVI4;A0A291NGK6;A0A286LDB1;A0A223FL01;A0A858BAV9;A0A1Z1VXF7;A0A3S6RF48;U6ER51;W0HE66;B1PKY1;C5IWZ2;D5H3U1;D5H3U2;D5H3U3;D5H3U4;D5H3U6;D9UB11;A0A286LD90;A0A1W1B695;A0A286LD96;A0A8F5FV40;A0A286LD97;D7GM35;Q9GIP0;A9QVM4;A0A286LD98;A0A1G4NQS3;A0A1W1B663;A0A3S6RHP3;A0A1W1B5T2;A0A2K4Y3H1;A0A2H4ZAS3;A0A2K4N853;A0A2K4N814;A0A2I6SQU3;W8Y4A2;A0A2I6J4D9;A0A2I6J4A6;A0A7R9PTL5;A0A2I6J4D4;A0A7U3K2I6;A0A7R9PTI9;A0A7R9PT89;A0A2H4WPY7;A0A2H4WPW6;A0A2K4N860;A0A2I6J4B0;A0A7R9KAX6;A0A2K4Y3F8;A0A7U3K2I8;A0A2P9FIH7;A0A1S7SKC6;A0A291NGN0;A0A2D1CHG2;A0A125R6G4;A0A2H4UK40;A0A2P1CXW7;A0A2P9FII5;A0A2P9FIG8;D0V0C4;A0A2P9FIG5;A0A2P9FIF6;Q5MCQ6;A7MAP4;A0A2P1G6E1;A0PBY5;A0A167RN11;C5IWY0;A0A223PYB8;A0A223FLI6;F4NCR9;A0A3S6RFH2;A0A2U3QLH6;A0A2Z4C138;A0A330NMI6;A0A3Q9B4Q6;A0A3S6RFI0;A0A3S6RFH9;A0A2U3QLI6;A0A3S6RFD8;Q5SUL5;Q5S3G3;Q2LC93;Q2A689;A0A3S6RF85;X5MI15;A0A386IRN0;Q2A688;A0A2U8RNL0;A0A2S1B6U6;A0A2S1B6V2;A0A2U3QLL2;A0A2P9FIS3;A0A2U3QLQ4;A0A2U3QLM0;A0A2U3QLH8;A0A2U3QLI3;A0A2U3QLL9;A0A2U3QLL3;A0A2U3QLJ9;A0A2S1B6V5;A0A2U3QLI9;A0A2U3QLH4;A0A3S6RF33;A0A2S0SYS7;A0A2R3STY5;A0A2U3QLG6;A0A2S1B6V6;A0A8E4J507;A0A2P9FIR9;A0A2P9FIS9;M4QEH4;A0A345F0V2;A0A3G8GE10;A0A3S6RF29;A0A1S5UXJ4;A0A2P9FIP7;X5MPH3;I3ZN77;Q5ZGM8;X5MBH2;A0A8F5J0E1;A9YWM1;D9UB10;B2MVI0;B2R7U3;B6ETN7;C5IWX4;H2DMX5;X5LKD6;A0A346MPT7;A0A3S6RF59;A0A346MPT9;A0A346THJ1;A0A0D6K9L7;A0A375B7T7;A0A8G1LT45;A0A3G2LWU0;X5MFE4;A0A858LKF4;Q95HA5;A0A3G4R8Q7;A0A3G6IIS6;A0A3G6ILP0;A0A7U3K2M2;A0A7U3K2L8;A0A7U3K2K3;A0A7U3K2J7;A0A6B9KAH8;A0A6M8PV20;A0A7U3K2H6;A0A678ZWM0;A0A4P2SSM5;A0A4P2SSK8;A0A4P2SSI7;A0A5H2UF95;A0A678ZMH4;A0A678ZMY4;A0A678ZVJ3;A0A678ZVN3;A0A678ZW80;A0A678ZWL7;A0A678ZWM3;A0A4P2SSP6;A0A678ZZC3;A0A7R9PTI1;A0A678ZH97;A0A678ZZI0;A0A6B7FSY7;A0A6B7FT87;A0A6B7FTG2;A0A6B7FTH0;A0A678ZI33;A0A678ZZD8;A0A4P2SSN8;A0A4P2ST76;A0A678ZGZ9;A0A4P2STQ9;A0A4P2SRE5;A0A4P2SR70;A0A4P2SR52;A0A4P2SR01;A0A455JTM2;A0A678ZM25;A0A455JS07;A0A455JRX1;A0A411GA17;A0A411CX79;A0A4P2STU3;A0A5H2UHK1;A0A4P2SS00;A0A4P2SS53;A0A4P2SSE9;A0A678ZKK9;A0A678ZIN6;A0A678ZIC5;A0A678ZIA4;A0A5H2UI54;A0A5H2UHU6;A0A4P2SQV2;A0A5H2UYT5;A0A5H2UV00;A0A4P2SRS4;A0A2H4RK80;P04439-2;A0A6C0SGK5;Q6IV48;A0A678ZH37;A0A678ZGK4;A0A5H2UTB6;B7ZAP7;A0A6B7FVE5;A0A0S4XRG0;Q29840;Q6IVJ5;A0A7U3L8M6;Q6IVJ6;A0A1Z2R893;J7SA67;Q5SRN5;A0A583ZB79;A0A583ZB34;A0A0G2JIF2;A0A3S6RFJ2;A0A3S6RHY6;A0A1W6C2M7;P04439;A7LB37;A0A5H2UIC5;A0A5H2UYR7;A0A5H2UIF3;A0A5H2UT43;A0A5H2UU86;A0A5H2UUF9;A0A5H2UUH1;A0A5H2UYZ3;A0A5H2UI71;A0A5H2UYJ8;A0A5H2UYK0;A0A5H2UYP3;A0A5H2UYS7;A0A7U3L8N3;A0A5H2UUW3;A0A678ZZE9;A0A5J6CZG2;A0A678ZH10;A0A678ZGT6;A0A678ZGN3;A0A649ZU83;A0A4P2STV7;A0A7U3L8J5;X5MI21;A0A4P2SRG9;A0A5H2UYS1;A0A5A4LK74;A0A7R9KAM5;A0A7R9KC42;A0A7R9KC32;A0A7R9KBA2;A0A1Z2R875;A0A7R9KB10;A0A7R9KAD9;A0A7R9KAX0;A0A7R9KAQ5;A0A6S7YP09;A0A4Y6GTZ7;A0A7R9KAK2;A0A6S7YTK2;A0A7R9KAI8;A0A7R9KAI7;A0A7R9KAG9;A0A7R9KAE6;A0A7R9KCP8;A0A7R9PSQ5;A0A6S7XX17;A0A6S7XX07;A0A6S7XU09;A0A6S7XTF4;A0A7R9KAV3;A0A6G7S6I1;A0A0S4XR33;A0A6B7HHT7;A0A238TQ66;A0A6B7HGN9;A0A6B7HGQ0;A0A6B7HGQ4;A0A6C0SGT3;A0A6B7HGN4;A0A6B7HGG7;A0A5H2UF78;A0A6B7IBZ7;A0A6B7HGN3;A0A6B7HGG8;A0A6B7HHU7;A0A6B7IDW6;A0A6B7HGE9;A0A0U5Q074;A0A6C1HXA0;A0A6B7IEM1;A0A6B7IFL7;A0A6B7IFQ5;A0A6B7KQ45;A0A6B7FWJ4;A0A6M5WPK7;A0A6G7S6J8;A0A7L7TX66;A0A6H0Y7F3;A0A6B7FU34;A0A6B7FTH7;A0A7L7TND1;A0A7L7TR54;A0A6B7FUZ8;A0A4V0NP68;A0A6M4EQQ7;A0A5A4LH43;A0A5A4LHD7;A0A7R8ND24;A0A5A4LIR8;A0A4P8D7F1;A0A583ZB21;A0A4Y7LIQ4;A0A5A4LJ79;A0A5A4LLH1;A0A5A4LTQ0;A0A5A4LTS8;A0A5A4M307;A0A5H2UEH6;A0A5A4LLE3;A0A5A4LLF6;A0A5H2UF23;A0A6B7FUW9;A0A5A4LI86;B4DVC4;A0A7R9PT76;A0A7L7TXC4;A0A7D3UWS0;A0A7D5DVF6;A0A7R9PSV1;A0A583ZB83;A0A7R9PSY4;A0A7G4RN38;A0A7G4WM27;A0A7L4X6X6;A0A7L4X795;A0A7R9PSZ4;A0A7L4X7E9;A0A7D7QND4;A0A4Y5WSJ0;A0A7L7TUL6;A0A6B7FVM4;A0A7L4X7H4;A0A7R9KB27;F6IQZ5;A0A5A4M334;F6IQX4;A0A5J6CX62;A0A4P2STA1;A0A5H2UF70;A0A5J6VAS1;A0A5Q5ADF6;A0A583ZAW1;A0A4P2ST16;A0A514QQ52;A0A4Y7LMX2;A0A5H2UV18;F6IQZ3;F6IQW8;A0A5A4LK96;A0A583ZB92;F6IQX7;A0A5A4LHG3;F6IQZ4;A0A5H2UUV9;Q29689;A0A5A4LJA0;A0A5H2UUG5;Q9MY51;A0A5H2UFF7;A0A5A4LLF0;A0A4Y5P8Y7;M9QZ33;A0A8F5FUX2;Q29907;C5IWY5;C9EIW0;F6IR15;C5IWY4;F6IQY1;F6IQX1;C5IWY3;F6IQZ6;Q708C4;Q9TQ74;E5FQ47;A0A8E4J3X0;X5D2K4;A0A3S6RF10;F6IQY0;D5H3U8;D5H3U9;D5H3V3;F6IR23;D9UB08;A0A7T8GEE8;A0A4Y5ULL4;A0A6S7XTY7;A0A7D5U624;A0A7G7XYK9;F6IQX0;B1PKY3;F6IQX6;D9UAY1;Q95J06;A0A649UPT4;Q8MGZ1;A0A3S6REZ3;A0A6M4C6H9;A0A3S6RFA8;A0A678ZVI9;A0A678ZVR7;A0A678ZH46;A0A678ZWD9;A0A678ZWE9;A0A678ZZG5;A0A6B7FT63;A0A6B7FTB7;A0A678ZKN1;A0A678ZGW5;F6IQZ0;A0A6M3YRX8;A0A6H0Y7A3;A0A6B7IE46;F6IQZ1;A0A6B7KQ33;A0A678ZVM5;A0A678ZVI4;A0A6M8PHV3;A0A678ZNU6;F6IQX2;F6IQY5;A0A6B7ICX9;F6IR10;A0A6B7HGP6;A0A6B7HGP5;D3YFD2;E1Y7G0;E1B2D6;E0YW13;A0A6B7HGK8;F6IQY8;A0A678ZVP6;A0A678ZLG1;A0A678ZM81;A0A6N0A1S6;A0A6B7HG31;A0A3S6RFC0;A0A649ZV15;A0A4P2SRY5;A0A4P2SRW8;A0A4P2SRR6;A0A4P2SRH7;A0A678ZGN8;A0A4P2SQZ3;A0A6B9VR96;A0A3S6RFH1;A0A455JVW4;A0A455JVN8;F6IQX3;A0A410JA26;A0A3S6RIB1;A0A4P2SQQ2;A0A4D6P079;A0A649XW30;A0A6B9VT42;A0A6B7HHR8;A0A4P2SR03;A0A6C1I636;A0A6C0THY7;A0A6C0SHE6;A0A6C0SGL7;A0A6C0SEA1;A0A6C0SE86;F6IQZ2;A0A6B9VTR1;A0A678ZGK2;A0A6B9RW39;A0A6B9MYT7;A0A6B9MYI0;A0A6B9MMH3;A0A6B9KAN4;A0A6B9HR00;A0A7R9PSY1;A0A0U5IHR8;F6IQZ8;A0A0U5Q0T4;A0A0S4XQU2;A0A0A8R645;A0A0S4XQV8;A0A0S4XQV4;A0A0G2R211;A0A173ADJ6;A0A0S1MSS0;A0A0S4XQP3;A0A858LHR6;A0A0U5Q1V3;A0A1C3PHA5;A0A2K9UYT2;A0A2H4RK91;A0A2H4WPX6;A0A2H4WPY0;A0A0S4XRI7;A0A109QAI7;A0A7R9KAL6;A0A109Q9J9;A0A858LH71;A0A858LNP5;A0A8E4J3N5;A0A0S4XQY5;A0A0S4XRV0;A0A0S4XRQ7;A0A0S4XRN8;A0A0S4XRM0;A0A0S4XRL3;A0A0S4XRH9;A0A0U5PUM0;A0A0S4XR73;A0A0S4XR02;A0A0U5Q086;A0A0Y0GTU3;A0A2H4WPZ8;A0A2H4ZAS9;A0A286LDA7;A0A090CXP3;A0A1W1B5W6;A0A1C3PHT5;A0A1C9UPQ3;A0A1W1B6J1;A0A386IRL1;A0A1C3PH90;A0A286LDA3;A0A223FL78;A0A223FL67;A0A223FL08;E0WN84;A0A223FKZ7;A0A1Z1VXF6;A0A1Z1VXE9;A0A223FL72;A0A1D8MAS0;A0A1D8MAP1;A0A3S6RHK9;A0A2Z5BTT3;A0A2P9FIT1;A0A2U3QLE8;A0A2U3QLG4;A0A2U3QLL1;A0A2H4ZAT7;A0A2U3QLL7;A0A2P9FIH2;A0A1D3KYH0;A0A286LDA6;A0A286LDA5;A0A286LDA4;A0A1C3PHB3;A0A346HFZ7;A0A1C3PHB5;A0A3G2Y4K4;A0A3G5BD46;A0A3G6V369;F6IR02;F6IQR9;F6IQS0;F6IR20;F6IR12;F6IR13;F6IR11;F6IR14;A0A7R9KD30;A0A7R9PTM2;A0A7L9VYC9;A0A7S5GRS2;A0A7S5GS66;A0A7S5GSM8;F6IR16;A8YQE6;F6IQX5;F6IQY2;F6IR19;F6IQW2;F6IQV6;F6IR22;F6IQV7;A0A7R9KAM7;F6IQW0;F6IQW1;F6IR09;F6IQW7;F6IQW3;F6IQW5;A0A7R9KAP8;A0A7R9KB37;F6IQV9;A0A7R9KCK8;F6IR06;E0WN91;F6IR00;A0A7S5L7R1;A0A7L7TMQ7;A0A7L7TRP2;F6IR03;F6IQZ9;A0A7U3K2D3;F6IR31;A0A858LGC9;A0A858B865;A0A858B753;A0A7U3L8Q2;A0A7U3K2K0;A0A7U3K2H1;A0A7U3L8I6;A0A7U3K2F6;A0A7U3K2E4;A0A7L7TMP1;A0A7L4X732;A0A7S5L7U0;A0A8E4NFK8;A0A8F5CF39;A0A7R9KAF6;A0A7R8V9S8;A0A7R8RJC5;A0A8E4NFJ6;F6IR04;F6IR05;A0A7U3K2C4;F6IR01;A0A8E7F1X6;A0A8F2EWC2;A0A8F2PMX5;A0A858LHL7;A0A7L4X6Z6;E0WN90;J7HDW9;A0A078BNH2;A0A1G4P1W1;A0A1P8SNL2;A6YT92;A0A1G4NR30;A0A1B1UZJ8;A0A1G4NQQ7;A0A1G4HPS6;A0A1D6ZNI8;A0A1C9LUP6;A0A1C3L6B0;A0A1B1UZK6;A0A1P7ZSR8;A0A1P7ZSS7;A0A2L2DGX7;A0A2P1CQD6;A0A286R107;A0A2D1WB98;A0A2Z6IEZ1;A0A343J4V7;A0A343J4V8;A0A2R4KZU9;A0A0S2UQ67;A0A3G8GE25;A0A1P8SNK9;B5A9M9;M9T819;A0SXS8;A0A143Y4R2;U5YMJ4;U5YMI9;U5YMJ8;U5YML8;U5YMP4;U5YMP9;U5YMQ3;U5YMQ8;U5YJJ6;U5YJK6;A0A385NKT9;A0A4P8VUH0;Q95IG4;A0A6G6CDI9;U5YJL3;A0A583ZAV5;A0A1Z1EGK5;W9AAG4;F6IR07;F6IR08;A0A7R8RJC0;A0A1W7IP21;E0WN60;A0A0F7DDK2;M4TCH1;A0A110BH75;C4PFW7;A0A142J2H9;M4X2U5;A0A125RL90;A0A110BIQ6;A0A110BIH1;A0A142J2I1;I6R2W1;M4VSN7;M4RCG9;A0A060GQ71;M4R8V2;M4NUQ2;A0A142J2I0;M4NJM4;A0A3G9H9G9;A0A3T1DFS0;A0A140CTI6;M5A8I6;M5EE32;Q3YBM1;A0A0S2C4N3;A0A0S1YF58;A0A0P0HDI3;A0A0N9R1U5;A0A060GTH2;A0A060N342;A0A076L0P9;A0A076V2L0;A0A0G3EHK9;A0A076V7U7;A0A077YIJ7;A0A078BPG3;A0A097F1T0;A0A097PED7;A0A0F7RPE2;A0A0H5CW52;A0A0H5CWT9;A0A0K2GVF7;A0A0N9E2I7;A0A0N9MQ43;A0A0H3WB50;A0A0N9QYF2;A0A0N9QYE2;A0A0N9QNI4;A0A0N9QYZ0;D5H3U7;D5H3U5;D0AB29;A0A076JS26;Q860B4;A0A0D6K9K8;A0A0D6K9D3;A0A6M8DJN3;U4PDP4;A0A0M7RFC2;A0A090KKK5;G0Z6Y6;A0A345F7A6;A0A076JXB7;A0A1W2PS24;A0A1V0EFF3;A0A0K2CWW0;Q5D1X1;Q0E7X7;A0A0G2JI36;Q6IVJ7;Q6IVJ8;Q6IVJ9;A0A345F7A8;A0A143Y4D5;A0A5B9QYU6;A0A7U3W2F8;A0A6B9HBN1;A0A5P8I434;A0A6M6AMD7;A0A7T3RIT5;A0A0D6K978;Q860B5;A0A7T8G1R7;Q7YPW4;C0KLT0;A0A142J2B1;Q861B7;A0A345F7A9;B7VF83;A0A650AP25;G9FTK2;W0HII0;A0A0D6K9L8;A0A0S2IIT2;A0A0F7NJH7;A0A2P1CQG7;A0A218N9T3;A0A649ZUY7;L8B934;A0A0D6K959;A0A8F4GDW7;A0A1V0EFF9;U5YJQ7;U5YKF4;U5YME5;U5YMF0;U5YJL1;D5H3V9;U5YKF9;A0A1D3TZM3;U5YMI0;U5YMI4;D5LN74;U5YKG4;U5YJK1;A0A1V0EFI3;U5YJH0;B1PT16;A5PHT7;U5YKC8;A0A866W2Z2;D5H3V8;U5YJP8;A5PHP7;U5YJQ0;U5YJQ4;U5YKG9;D9UAY2;D9UAY3;A0A4P8D7G8;A0A1V0EFG6;A0A1G4HPU0;A0A0A1EAW8;Q5SRN7;A0A143Y239;Q14SN2;Q2L4F0;A0A5P8I410;A0A6M6CC39;Q6IUZ4;A0A0U5LBS5;W5ZPB5;A0A0K3AQ92;Q0E7X3;A0A060VCY7;Q5ND69;A0A583ZB55;D6CIB9;D6CIC1;A0A1Z2RP28;D6CIC0;M5ETC1;M9TIT3;D3JW65;A7MAK2;A4GWZ0;A4GWZ1;A0A7T6AP80;A4URG8;Q9BCN8;E3Q0X4;A5PHT4;A5PHT9;A7L858;A7MAE2;A7WPI8;A2VBZ7;F2XI30;G8ZKX4;C7C695;C7C6D3;C7E539;E7BJ52;E9ABX3;F2XI28;A8E0Y3;A9QUT7;A2VC06;A2RQE0;M9TNT6;B0FWH0;B6VA01;B6VA02;B7VBV1;B9VJL7;C0MP56;C1KBJ6;C6H0N6;C6H0N8;B1Q4X2;C6L836;A9IW15;A2Q117;C3VAL4;A0A4P8L8W6;A0JHM7;A0A514YDS8;A0A514YDT1;A0A5H2WUX1;A0A5J6BTF9;A0A6C0TJ32;A4URF2;A0A4Y6GU97;F2XI31;F2XI33;Q9TQP8;D1MZT7;C7EW70;C7EW71;C7U1K2;C7U2Z0;E3WH33;G9FTJ8;D0VFI1;D5H3W2;D1MYY8;D1MYY9;D2KZ53;G8FV57;D2KZ55;I1U8N0;A5I8L2;D0W032;D5H3W3;D6CIB2;D6Q0R2;D9UC12;E0WMN1;E0WN57;C7ENH9;E2G792;D0RB02;C9E9Y0;G8FRJ5;G8FQ53;G4V593;G0UE14;F2XI32;G0M6G1;F8LSY2;F8LSV3;F8LSV2;F5CIU1;F2XI35;F2XI34;F8T1H2;A0A0F6SCZ8;G9DBG6;H2D5G2;H2DEU0;H6SSQ0;H9C3L3;I0DFI9;E7BBA1;B6ECH6;B6ECH3;B6ECH2;J7JGT4;Q2PP85;I1VXL8;L7UVL0;L7QJU3;L7QJ97;L7QJ95;K7SHJ4;W6CHX3;J7SBK9;J7JHS1;J7I2U3;L7V338;J7HGX9;F6IQW9;L7X986;L7Y4K8;M1KDJ9;Q6AW25;W6CGW3;W0G8I7;W0FBM8;V5V1E3;Q4W6C0;I6QYX3;I6M4H5;I3Y3J5;N1NRX6;Q4W5U0;Q0E7X5;Q0GC70;Q1EJP6;Q1EPW2;Q25BN7;Q4A1H0;I7H3R1;I7B4Y2;I6R2V6;M5EFF5;Q4ZG93;M1LMH3;Q5NTA9;M1KE04;M1K8H4;I2GUK1;I2E8C4;I3TBB8;I3VB21;V5L1W2;U6BZQ8;B2DFW8;B1Q4X5;R9WYX8;B3VE20;R9UTP9;R9UR01;R7RVB7;R7RV73;R4NJ42;R4KXX0;I1U8N1;I0DHJ2;B3VE19;T2MJM6;B3IYE6;B2ZRD4;B2NJ13;A0A6B7HGP2;B2NIY8;B2DFW7;B2DFV0;B2DFH6;B2DFH5;B2DFH4;S0F2B1;S0F2B5;S0F2B7;Q95IG6;T2BQE4;S6B3R2;Q6F3E3;Q6F3E2;U3R9Y1;K7W4U9;W6CJ57;W6SIV4;S5U3G8;X2J8Y7;X4YT82;X5EM81;S4VA55;S5CRT1;I7HCZ5;W8NKP1;Q6L675;Q8HWT0;A0A6B9VTX5;S0F2I4;Q8MGZ8;F6IQW6;A0A2H4WPY5;A0ZXY8;I0J2M4;A0A5H2WTZ8;A0A4P2SRG2;A0A4P2SQT5;A0A2Z6DS69;A0A6G9W1F6;A0A223PYD8;A0A1W1B5M6;A0A1D8MAN3;A0A0D6E067;F6IR24;F6IQW4;F6IQZ7;A0A6B7FWW8;A0A286RYQ4;A0A5H2UYS3;N1LK74;A0A3G2FPD9;A0A3G5BD32;A0A8E4J3R5;Q0MSI1;F6IR32;A0A6B9HSD8;A0A6B7HGI7;A0A4U9C372;A1Z1D7;A0A858B9G6;I2GAD6;A0A6F8Z9L3;A0A6B7HHU0;A0A7S5GSJ7;A0A2K4ZRK0;O15506;B4DVB9;A0A060VCW6;A0A060VCX2;D0W033;A0A3G2LWR5;A0A0F7W082;A0A8F4G8X1;X5MBH7;A0A060VCZ3;L8B936;A0A411J078;A0A583ZAY5;A0A060VD10;A0A060VCY6;B7ZA80;A0A181C4Z2;A0A3B0PDB1;A0A8F4GAB4;A0A583ZB89;A0A8F4JG78;A0A866VWG0;A0A060VCZ1;A0A1W2PQD0;Q2L4E7;A0A060VG42;A0A8F4G6S8;A0A1D8QKY3;A0A8F4G6Q4;E7AJF9;A0A090MEX8;O19689;A0A1W2PSE7;Q59GJ2;A0A0G2JL56;A0A8G1LSM1;A0A4V0NP52;A0A678ZWL4;B4E2X4;A0A4P8VYK0;A0A6B7FTE9;A0A7D7QGZ4;A0A8E4NFK9;A0A8E4J527;V6CKU4;A0A678ZN67;A0A5A4M351;A0A0F7NGH0;A0A7T3RIP7;D9UB05;A0A410P7W7;A0A3S6RF15;I4EPX9;A0A3S6RF24;A0A493QP44;A0A678ZGZ8;A0A5H2UYX2;A0A678ZI24;Q546B1;A0A678ZIR9;A0A6C1I9H9;A0A5H2V1G4;A0A6B9WFI1;A0A6C1HWD9;A0A678ZIV9;A0A678ZIV2;A0A6M8DNF6;A0A6C0MAN1;A0A6C0RRE3;A0A6C0SHD4;A0A6G6C3T0;A0A6C0TE73;A0A6C0TH04;A0A6C0THE4;A0A6C0THI8;A0A6C0THZ3;A0A6C0TIQ6;A0A678ZN76;A0A6C0W8C8;A0A6C0SGB2;A0A6C0SE99;A0A678ZJ28;A0A6C0SE77;A0A6C1HWI2;A0A6C0SDK7;A0A6C0RRX8;A0A678ZH09;A0A6C2E453;A0A6C1HZ89;A0A6B7HG67;A0A6C1I5T6;A0A6C1HXB7;A0A6C1HXA1;A0A5H2UZ78;A0A6C1HX87;A0A6C1HWP4;A0A6C1HWJ0;A0A7L7TUN9;A0A7L7TX95;A0A5H2UZ70;A0A6C1I5V6;Q29932;A0A6B7HFW0;Q29637;A0A5H2UZ44;Q1JRH1;Q1M2R9;Q1M309;A0A5H2UZ51;A0A2I8B370;A0A6C1HXJ4;A0A6C2E459;A0A5H2UUW4;A0A649ZUV8;A0A6C0SH00;A0A6C2E3Q7;A0A6C2E140;A0A6C2E0X0;A0A678ZJ03;A0A678ZIX0;A0A5H2UUV5;A0A6C1HWH2;A0A5H2UZD2;A0A6C1HXL7;A0A6C1I600;A0A6C0SE68;A0A6C1HXF0;A0A5H2UZB1;A0A6C1HZB6;A0A6C1HYJ6;A0A6C1HWI3;A0A5H2UZ80;A0A6C1HXN5;A0A6C0SHC7;A0A6G7NQD3;A0A6C0SGX4;A0A6G7S6G2;A0A6M8PDX3;A0A6H0Y8J8;A0A678ZP39;A0A6S7YTP9;A0A6M4RVV9;A0A6M4C6E8;A0A6M3W7R4;A0A6M3W7Q8;A0A6H0YXU1;A0A6H0Y8K8;A0A6M8DY28;A0A6H0Y7T8;A0A6S7XUL2;A0A678ZP18;A0A6B9WEW4;A0A6G8QHX7;A0A6B9VUR2;A0A6G8IR14;A0A6G7S733;A0A678ZN19;A0A678ZP61;A0A678ZP73;A0A678ZHW3;A0A6S7XSP1;A0A650AB56;A0A678ZI07;A0A6S7XTJ7;A0A6B9VUS8;A0A678ZHX7;A0A678ZI17;A0A678ZH44;A0A678ZPD6;A0A6M8PL03;A0A678ZPB0;A0A678ZH60;A0A678ZH83;A0A678ZHA1;A0A678ZHA3;A0A6N0A4J6;A0A6N0A228;A0A6M8PL08;A0A6G7S6I3;A0A6S7XTG4;A0A6C0SGI7;A0A6B7IEZ8;A0A2I8B371;A0A6S7XXL9;A0A6S7XWX3;A0A6C0TGR7;A0A6G7NU37;A0A678ZMZ1;A0A6S7XV67;A0A6S7XUS7;A0A5H2UVM3;A0A6S7XUQ9;A0A678ZM99;A0A678ZJD6;A0A6S7XUQ0;A0A6S7XUN3;A0A6S7YTL5;A0A6C2HEL2;A0A678ZJB3;A0A6C0SGE8;A0A678ZJ95;A0A678ZJ81;A0A678ZNL0;A0A6S7YNS6;A0A6V6XY92;A0A6G9W189;A0A6G9EBV7;A0A6S7XU17;A0A6V6XYB1;A0A6V6XYA5;A0A6V6XYA3;A0A678ZNW3;A0A6V6XYA0;A0A6S7YTQ9;A0A678ZNM9;A0A6S7YTN9;Q5HYL2;A0A6S7XXG3;A0A6S7XX38;A0A6S7YP46;A0A6S7YNU8;A0A6S7YNT9;A0A678ZNU3;A0A5A4LLR2;Q2YHR9;Q1RPB8;H6X1W9;Q7YNX1;Q70Q11;Q70Q09;Q70CQ0;Q6KEQ1;Q6H8L0;C6K6H8;S6FC63;X5M233;S6EYQ3;A0A858B7M8;W0NSR9;X5MK36;W8YMX3;S6FC68;W0UTQ9;W0NWG3;V9HVZ9;V6E0U6;V6DZ79;V5NX26;S6F453;Q7YQ88;Q7YQB0;S6BVK3;I3QHX6;I3RQ46;A0A6S7XTM0;Q5QT34;A0A6B9VSH5;Q860I6;Q5TK75;Q9UIP6;Q9TPW6;S6AU73;Q860I5;S4VE60;R5A1K5;Q9MYI6;Q860I7;Q9MYC0;Q9MY33;Q9GIX2;Q96DW9;Q95346;S6FM58;S6FM53;C6K6I4;A0A858LH02;A0A858B8W0;A0A858B6V2;A0A7T8R2K5;A0A858B8U6;A0A7U1GEW3;A0A7U3NN61;A0A7U3TLF8;A0A7U3VI85;A0A858B6R1;A0A858LGZ1;A0A858LH39;A0A858LGY4;A0A858BAP7;A0A858LGV8;A0A858LGP0;A0A858LGL9;A0A858LGH1;A0A858LFT2;A0A858LFN6;A0A7U1BDA0;A0A858LHA3;A0A858LH30;A0A7L7TXA5;A0A858B8V8;Q5SS57;A0A858B8N7;A0A858B8C0;A0A858B8T6;A0A858B8T4;A0A858B8R5;A0A858B8Q0;A0A858B8P9;A0A858B8A9;A0A858B7L9;A0A858LH10;A0A858B889;A0A858B840;A0A858B7V0;A0A858B7U1;A0A858B7Q0;A0A858B8U9;A0A858B6W0;A0A858B6S0;A0A858LH09;A0A2I8B363;H6VGI9;Q1RPB9;G9FS21;P79549;P79612;Q08GE3;A0A6C1HXG7;Q52S25;D7GM37;A0A5H2UUX3;Q3ZV43;Q3ZUB3;Q3LRR5;Q3BK34;Q31602;Q306W0;O19755;Q52QV7;Q2YHR8;Q2L6G2;Q29985;Q29981;Q29943;O78189;O78218;Q29911;Q29938;Q29844;Q1ZZH2;Q29644;O19790;Q29669;Q29700;A0A678ZHD5;Q29705;Q29748;Q29767;Q0VJ75;Q29941;Q0EFB2;Q08GE4;Q546C9;Q546I9;Q546J0;Q546P4;Q549W0;Q54A64;Q29849;Q30172;C6K6H9;Q52QV6;I4ENP1;O19554;G9FS20;A0A678ZHD7;E7CRP1;E5FQ95;C6K6I6;C6K6I7;C6K6I8;C6K6I9;I3ZN84;M4QFU4;I3ZN83;F4YTD1;F8TR68;G0VL32;G0ZG53;G4XN19;G5DSS2;C6K6J0;G7ZKB5;M9WKA6;K7SRB3;D5L9K0;D2IYK1;E5FQ93;E5FQ58;E5FQ57;D9UB13;D9UB12;D9J307;E7CRN8;E5FQ94;D5H3J5;D0EKP3;I7LR87;C9E399;C7FNH8;C7EXL9;C6K6J5;C6K6J4;C6K6J1;F4YTD0;I4ENP2;I6QS32;A0A6B7IF45;A0A5J6CX16;A0A5H2UZ50;A0A6B9VTZ7;A0A6B7KV52;A0A6B9VTX1;A0A6B9VU45;A0A6B9KAL8;A0A6B9VU91;A0A6B9VUA2;A0A6B9VUA9;A0A6B9HQY7;A0A5A4LKC4;A0A678ZPM1;A0A6B7KVC4;A0A6B7KXI8;A0A6B7KYU3;A0A6B9HD56;A0A6B9HN98;A0A6B9HP03;A0A6B9HP17;A0A6B9HQP9;A0A6B7KQ96;A0A6B9HQR7;A0A6B9HQX9;A0A7D9AMQ8;A0A7D9AMW9;A0A7D9FYU1;A0A7G7Y1V2;A0A6B7L1K4;A0A6B7L1J2;A0A6B7KYU6;A0A6B9KHS9;A0A6B9IXC2;A0A678ZZN0;A0A6B7HFK3;A0A678ZX96;A0A6B9VRZ1;A0A678ZX92;A0A6B7HFS9;A0A678ZX90;A0A678ZX85;A0A678ZX84;A0A6B9VRQ1;A0A678ZZN5;A0A6B9VRK8;A0A180K1E1;A0A6B9VRG3;A0A678ZXB4;A0A5H2UUM6;A0A678ZZZ1;A0A6V6XYB2;A0A6B7IIE7;A0A5H2UUL4;A0A678ZXB8;A0A6B7HFJ3;A0A3S6RFU3;A0A6B9VS30;A0A6B7HFJ9;A0A678ZXA6;F8T958;A0A3S6RI19;A0A7D9FZ80;A0A6B7KV78;A0A6B9VSY7;A0A2I8B364;A0A6B9VRJ7;A0A858BB14;A0A346HG02;A0A678ZX55;A0A2I8B365;A0A2I8B367;A0A2I8B368;A0A6B9VRJ5;A0A6B9VSE7;A0A6B9HBP5;A0A7D8ZZS1;A0A7D9FXB9;A0A6B7IIK8;A0A7D8ZZI8;A0A7D9BUL2;A0A7D9BUK9;A0A7D8ZZT6;A0A6V6XYC3;A0A6V6XYB4;A0A7D9BVC8;A0A7D9BVP2;A0A7D9AMS5;A0A7D9BUK7;A0A6B7KR20;A0A6B7KR09;A0A6B7KQ98;A0A6B9HQ54;A0A6B7L1K9;A0A7D9BUL4;A0A7D9BUN5;A0A7D9BUN1;A0A7D9BUM3;A0A7D9BVE7;A0A7D9BUM2;A0A678ZXE9;A0A6B7FV78;A0A6B7IF66;A0A6B7FTJ1;A0A6B7FWV1;A0A6B7FWU0;A0A6B7IHH9;A0A6B7FTJ7;A0A6B7FTL0;A0A6B7FWM3;A0A6B7FWL9;A0A6B7FWL2;A0A678ZPN5;A0A6B7FTJ2;A0A5H2V1W4;A0A6B7FWQ4;A0A5P8I423;A0A6B7FTH5;A0A5H2UUQ7;A0A678ZMW1;A0A678ZPE7;A0A6B7IHE7;A0A5H2V1L9;A0A5H2UUR3;A0A679A032;A0A6B7FTG8;A0A6B7FWV3;A0A6B7FTG5;A0A6B7IH80;A0A6B7IH53;A0A679A092;A0A6B7FWK4;A0A6B7IHT6;A0A6B7FVU9;A0A6B7FTR7;A0A6B7FTL1;A0A6B7FVN8;A0A6B7FV63;A0A6B7FV58;A0A6B7FV44;A0A6B7IHR4;A0A6B7FV38;A0A6B7FV36;A0A6B7FTL2;A0A679A0P9;A0A679A0S1;A0A6B7FWV6;A0A5H2V1W1;A0A6B7FV64;A0A678ZQM4;A0A5H2UVF2;A0A5Q5AD11;A0A5Q2UQT1;A0A5Q2U7C7;A0A5Q0TQW7;A0A5H2UZF0;A0A6B7HG94;A0A5H2UYV6;A0A5H2UZ63;A0A5H2UZ24;A0A6B7IG06;A0A6B7IHC4;A0A5H2UVC7;A0A5H2UZ28;A0A6B7IFA7;A0A5H2UVB6;A0A5H2UYW1;A0A649ZUD8;A0A5H2UVA0;A0A5H2UUY3;A0A2I8B373;A0A649ZU72;A0A649ZUA0;A0A2I8B374;A0A2I8B369;A0A5H2UYU2;A0A5H2V203;A0A858B9B2;A0A5J6SHU5;A0A5J6VB00;A0A5J6WEK8;A0A5J6WGH8;A0A5H2V1Z6;A0A6B7IGX1;A0A5H2UUP3;A0A5P8I435;A0A5P8TXU3;A0A6B7IE43;A0A5H2UUT4;A0A649ZUJ4;A0A5H2V1L5;A0A649ZUI8;A0A649ZUG0;A0A649ZUE7;A0A6B7HG99;A0A6B7IHU4;A0A6B7IHY3;A0A6B7HGD5;A0A6B7ICY7;A0A678ZX31;A0A6B7HHP1;A0A678ZW11;A0A678ZW32;A0A6B7HHM5;A0A6B7HHM4;A0A678ZW39;A0A6B7HGH2;A0A678ZW50;A0A6B7HG92;A0A6B7IDY2;A0A6B7HGG3;A0A6B7HGF4;A0A679A011;A0A678ZVW0;A0A6B7HGF3;A0A678ZWY6;A0A678ZWZ1;A0A678ZWZ4;A0A678ZVX4;A0A678ZW88;A0A6B7IDS0;A0A6B7HHK1;A0A678ZVT8;A0A678ZPP7;A0A6B9VRF0;A0A6B9VR91;A0A678ZQI1;A0A6B7HFU3;A0A678ZQJ6;A0A6B9VR31;A0A678ZQK2;A0A6B9V3S8;A0A6B9KKX1;A0A678ZQK7;A0A678ZX39;A0A678ZW20;A0A678ZVU7;A0A6B9VUF3;A0A6B7IDU8;A0A6B7HGD2;A0A6B7HHL6;A0A678ZX03;A0A6B7HGE5;A0A678ZX04;A0A6B7FU61;A0A6B7FTS6;A0A6B7FTQ6;A0A679A0N2;A0A5H2UU12;A0A6B7IDX7;A0A6B7FTP4;A0A6B7FTM9;A0A6B7FVU2;A0A6B7FTL9;A0A6B7HG78;A0A6B7FTL3;A0A6B7FUE6;A0A6B7HG79;A0A6B7FVS2;A0A6B7HG91;A0A6B7FUF4;A0A679A0I6;A0A6B7FWW6;A0A679A0E9;A0A6B7FTT3;A0A6B7IE13;A0A6B7HGE4;A0A6B7IHW1;A0A6B7KQ77;A0A6B7HGC9;A0A678ZX15;A0A482M0B0;A0A6B7IE31;A0A6B7IHZ0;A0A6B7II51;A0A6B7II66;A0A678ZW56;A0A678ZX22;A0A6B7II80;A0A679A050;A0A6B7IIA8;A0A6B7FWP0;A0A6B7FUD1;A0A6B7IIB4;A0A6B7IIE1;A0A6B7FVS8;A0A6B7FUB6;A0A7S5GS38;A0A7M1IEI8;A0A858B9A3;A0A678ZHL8;A0A583ZBU8;A0A678ZHP2;A0A583ZBS5;A0A583ZBT2;A0A583ZBT3;A0A583ZBU0;A0A4D6P130;A0A4P8P9M6;A0A5A4LHA5;A0A4Y7LMT4;A0A583ZBU7;A0A4P2SR34;A0A4P2SR22;A0A4P2SR16;A0A4D6Q6M7;A0A583ZBU6;A0A5A4LHD1;A0A4P2SRA5;A0A583ZBE1;A0A583ZBQ6;A0A4Y7LMH8;A0A678ZHR0;A0A4Y5QVM4;A0A3S6RFP8;A0A678ZHG5;A0A678ZHU1;A0A4Y5P9Y0;A0A678ZHS5;A0A678ZHR4;A0A4Y1YQ62;A0A4V0NP84;A0A4Y5R168;A0A4V0NP82;A0A4V0NP79;A0A4P2SRT3;A0A4V0NP75;A0A4P8PAN2;A0A4P8PAC0;A0A4P8P9N1;A0A4V0NP81;A0A4P8DJY3;A0A4V0NP78;A0A4Y5R161;A0A4Y7LLR5;A0A583ZBQ2;A0A583ZBM7;A0A583ZBM5;A0A4P2SRI7;A0A4P2SSF3;A0A4P2SSG8;A0A4P2SSI1;A0A4P2SSI8;A0A3S6RFQ0;A0A4P2SRX5;A0A4P2SR62;A0A4P2SRN4;A0A4P2SRM1;A0A4P2SRI2;A0A583ZBJ9;A0A4P2SRG6;A0A678ZHF8;A0A4P2SRT9;A0A4P2SRU7;A0A4P2SRF6;A0A4P2SRD4;A0A4P2SRC7;A0A4P2SRC5;A0A4P2SRC0;A0A4P2SRV3;A0A4P2SRA0;A0A4P2SRD5;A0A4P2SSE0;A0A583ZBE6;A0A4P2SR38;A0A583ZBS2;A0A583ZBC7;A0A583ZBB4;A0A4P2SR48;A0A583ZBA5;A0A514TNJ1;A0A4P2SR55;A0A4Y7LMV5;A0A4P8DJW0;A0A858LHX2;A0A4P2SS16;A0A4P2SS35;A0A4P2SSD3;A0A4P2SRY1;A0A4P2SRZ4;A0A4P2SS01;A0A4P2SS07;A0A678ZHE9;A0A4Y5RYD0;A0A858B970;A0A2U3T1L7;A0A2U3T1L2;A0A2U3T1K9;A0A2U3T1L3;A0A2I8B3D0;A0A2U3T1L9;A0A5H2UFC1;A0A5H2UF92;A0A5H2UF63;A0A2I8B3C9;A0A5H2UI21;A0A2I8B3C6;A0A2U3T1L1;A0A5H2UFL4;A0A5H2UFN0;A0A2I8B379;A0A2U3T1F9;A0A5H2UFS0;A0A2I8B377;A0A2U3T1G2;A0A2I8B384;A0A2I8B3C8;A0A2I8B3B8;A0A678ZHY7;A0A2U3T1K4;A0A2U3RU34;A0A2U3RUC9;A0A5H2UI55;A0A2U3T1J4;A0A2U3T1J2;A0A5H2UFI3;A0A5H2UFH7;A0A5H2UFF4;A0A2U3T1J3;A0A2I8B3A4;A0A2U3T1K7;A0A2U3T1M0;A0A2I8B3A5;A0A2U3T1J6;A0A2I8B3B5;A0A2U3T1K1;A0A2U3T1K2;A0A2U3T1J5;A0A5H2UFJ2;A0A2U3T1K3;A0A2I8B381;A0A2I8B378;A0A2U3RUD5;A0A4Y7LIS6;A0A5H2UFZ6;A0A2I8B3A3;A0A3S6RFN3;A0A4Y5RYN8;A0A4Y7LKV9;A0A4Y7LKV2;A0A4Y7LK17;A0A4Y7LJE1;A0A4Y7LJC8;A0A678ZH75;A0A5H2UG01;A0A4Y7LIQ6;A0A3S6RFP6;A0A4Y5UYF1;A0A4Y5US89;A0A4Y5ULZ5;A0A4Y5ULW8;A0A4Y5ULJ4;A0A4Y5ULH0;A0A4Y5T9E2;A0A2U3T1I8;A0A2U3T1I5;A0A5H2UFV6;A0A2I8B3A1;A0A2I8B376;A0A5H2UFS8;A0A2U3T1F7;A0A2U3RUE0;A0A5H2UFW4;A0A4Y5QYY1;A0A2I8B386;A0A4Y7LL60;A0A2U3T1I4;A0A2I8B398;A0A2U3T1G5;A0A2U3T1H4;A0A2U3T1H9;A0A2I8B390;A0A2U3T1I1;A0A2I8B399;A0A2U3T1J1;A0A2I8B385;A0A2I8B3A0;A0A4P2SRB8;A0A4P2SRE7;A0A4Y6JLR3;A0A2P0W8U9;A0A3S6RFT0;A0A482GS04;W0NW49;A0A4D6NWA3;A0A3S6RFS4;A0A2P0W8F7;A0A493QP64;A0A499S0B6;A0A4D6G103;A0A2P1CQC7;A0A3S6RFT1;A0A5A4LM29;A0A3S6RFT5;A0A2P1CXW3;A0A5A4LII1;A0A4D6NXH8;A0A4D6NYY6;A0A3S6RFT4;A0A5A4LHM3;A0A3S6RFT2;A0A5A4LJK5;A0A5A4LKM0;A0A4P2SSJ6;A0A455JVS9;A0A5A4LII7;A0A455QZK9;A0A455JWZ9;A0A5H2UIL7;A0A5A4LIJ8;A0A3S6RHZ0;A0A678ZPC4;A0A455JVR2;A0A455JVS7;A0A455JVT3;A0A5A4LJ28;A0A5A4LKN6;A0A5A4LJ18;A0A455JVZ8;A0A4P2SSM6;A0A482GNH6;A0A455JVX4;A0A5A4LJF8;A0A455JVZ1;A0A5A4LJ60;A0A3S6RFS3;A0A5A4LLZ7;A0A3S6RFQ3;A0A2P0W8F1;A0A2K4XH25;A0A2K4XH18;A0A5A4LLX7;A0A493QP59;A0A5A4LLU4;A0A5A4LLR9;A0A3S6RFV1;A0A493QP54;A0A493QP51;A0A493QP60;A0A5A4LLP9;A0A455JVG2;A0A455JU85;A0A3S6RFQ6;A0A5A4LLQ2;A0A3S6RFZ3;A0A3S6RFX3;A0A3S6RFW9;A0A3S6RFW4;A0A3S6RFU2;A0A482LWZ5;A0A455JVH5;A0A5A4LLZ2;A0A3S6RFV9;A0A3S6RFR5;A0A3S6RFR2;A0A3S6RFR1;A0A3S6RFR0;A0A5A4LHH0;A0A3S6RI12;A0A4D6NZ50;A0A3S6RFV0;A0A2P0W8E9;A0A5A4LHG5;A0A493QP63;A0A2P0W8F3;A0A2P0W8E6;A0A2L1K3Z3;A0A5A4LHN1;A0A2L1K3Y8;A0A2K9UYV2;A0A2K4XH82;A0A3S6RFV3;A0A455JW09;A0A455JWY3;A0A455JWZ6;A0A4P2SSU4;A0A4P2STE3;A0A4P2STD2;A0A4P2SSZ7;A0A4P2SSX2;A0A2P1G6E3;A0A4P2STI8;A0A4P2SR80;A0A4P2SSW1;A0A4P2SSV3;A0A4P2SSU2;A0A3S6RIH2;A0A4P8DJ86;A0A4D6P104;A0A4D6P091;A0A3S6RIC8;A0A3S6RIF9;A0A3S6RI27;A0A3S6RI29;A0A3S6RI47;A0A3S6RI51;A0A4P2STH2;A0A2P1FZJ4;A0A4P2SSX8;A0A4P2SR71;A0A3S6RIF7;A0A4P2SU57;A0A4P2SU59;A0A4P2SU63;A0A4P2STM2;A0A4P2STZ6;A0A4P2SU00;A0A4P2SU32;A0A4P2SU76;A0A4P2STK9;A0A4P2SR63;A0A4P2SSS7;A0A4P2SU87;A0A4P6MY22;A0A4P8DJ75;A0A4P8DJ76;A0A3S6RII6;A0A4P2SR69;A0A3S6RI15;A0A3S6RIC4;A0A5A4LHE7;A0A2K4U854;A0A455JVI5;A0A455JTR8;A0A678ZHJ8;A0A678ZHJ5;A0A678ZHI8;A0A678ZHI6;A0A4P2SR83;A0A678ZHH8;A0A678ZHH5;A0A678ZHJ9;A0A4P2SRB3;A0A3S6RID2;A0A455JVQ6;A0A481Y760;A0A481MTJ7;A0A2K4XGC5;A0A2K4XG97;A0A2K4XG70;A0A455JW03;A0A5H2UTY4;A0A455R0H3;A0A455JS58;A0A455JU59;A0A455JU53;A0A455JTT8;A0A3S6RID8;A0A3S6RIE1;A0A3S6RIE7;A0A3S6RIF0;A0A3S6RIF2;A0A3S6RIH7;A0A4D6NZ61;A0A3S6RII7;A0A3S6RIJ5;A0A3S6RIJ6;A0A3S6RIL4;A0A411E080;A0A3S6RII1;A0A3S6RID6;A0A455JS51;A0A455JTS5;A0A678ZHK9;A0A455JTT0;A0A2U3RU30;A0A2U3RU24;A0A2U3RU19;A0A858LJU7;A0A890UQ00;C5MK53;A0A890UYD3;A0A891XJI1;A0A891XJM4;A0A896SZ64;A0A896SZ70;A0A8E4NGQ5;A0A8E6YHT1;A0A858LJT8;A0A858LNZ2;A0A858LHX7;A0A858LHR9;A0A858LHR2;A0A858LHV8;A0A858LHV6;A0A858LHV0;A0A858LHU3;A0A858LHU2;A0A896SZ71;A0A890UKC4;A0A858LNW2;A0A346D3U7;A0A890UYQ6;C5MK54;C5J400;C1KES8;C5IUS6;C5IYE8;C5J3Z7;C5J3Z8;C5J3Z9;C5J405;C5J406;A0A858LKK1;C5J407;C5MK49;C5MK50;C5MK51;C5MK52;C0LZ21;A0A8F4G6R9;A0A8E8GGV6;A0A858LJV5;A0A8E4NF65;A0A8E4NFQ9;A0A896SZ81;A0A2X0U1A5;A0A583ZBE5;A0A2X0SXS0;A0A2X0SR66;A0A2X0SR76;A0A2X0SR84;A0A2X0SR93;A0A2X0SRN2;A0A2X0U1J6;A0A2X0SY22;A0A2X0SY28;A0A896SZ84;A0A2X0SY45;A0A2X0TUP8;A0A2X0TUU6;A0A2X0TV13;A0A2X0SXV7;A0A2K4N8H4;A0A2X0U1N1;I0LEY6;A0A2Z5HU70;A0A6B7HG75;A0A8E4NFV3;A0A897ZMV1;A0A8D6AS17;A0A8E4J4B7;A0A8E4NGL9;A0A8E4NGK5;A0A2X0U3N2;A0A8E4J7P5;A0A896SZD6;A0A8E4J459;A0A8E4J448;A0A8E4J675;A0A8E4J607;A0A8E4J603;A0A8E4J485;A0A896SZD1;A0A8E4J3Z4;A0A897PSY3;A0A8E4NF56;A0A8D9C3M0;A0A8D9C3J4;A0A8D9BWV2;C5MK55;C5MK56;C5MR74;A0A7S5L7Q5;A0A7R8NCX8;A0A7T8GED7;A0A7T4WRW4;A0A7T5V8A2;A0A7T5V8X1;A0A7T5V914;A0A7T6AMI0;A0A7S5GRV9;A0A7S5GRU3;A0A7S5GRN0;A0A7S5GT04;A0A3S6RG08;A0A7M4BG54;A0A7M4BGU1;A0A7M4BIE1;A0A7M4BIE7;A0A7T4WRW2;A0A7T4WRV0;A0A7T3V876;A0A7S5GSH9;A0A7R8NCZ1;A0A7R8ND10;A0A7R8NDB0;A0A7R8NDG9;A0A858B933;A0A858B923;A0A858B913;A0A858LFM7;A0A7T8KXE0;A0A858LGX8;A0A7R8V964;A0A7S5GRM1;A0A7S5GRL9;A0A7S5GRK0;A0A7S5GRJ9;A0A7S5GRG6;A0A7R8Z680;C6K6H7;A0A7S5GRR7;A0A7R8V8J0;A0A7R8V878;A0A7R8RKB7;A0A7R8NE98;A0A7S5GSK3;A0A7S5GT23;C6K6H4;A0A8G1GJM8;A7L6C1;A5CLI0;A5A340;A4FRG1;B1PWE6;A2VBB7;A0A858LHD8;C0KXH2;A0A8G1GJN8;A0A8G1GF07;A0A7S5L7G5;A0A8F7CEG5;A0A8F4WI08;A0A8F4WDF0;A2IAT8;A0A8G1GJQ4;A0A858LHF1;C0KZ90;C6K6H6;C6K6H5;A7L6C2;A7UM83;A0A858LHD1;A4FRG0;A0A7S5L7M7;A0A7M4CGR9;A0A7S5L7Q2;A0A7S6PT08;A0A7S9CES3;A0A7S9FTT6;A0A7T3RIT9;A0A7T3RIW4;A0A7T3V7M7;A0A7R8Z3P3;A0A858LHC4;B8YPU7;A8K861;B8YPU8;B6DUD5;B5MAH4;B3GPN0;B1PZN8;B1PZN7;A0A2Z5HU66;A0A678ZH66;A0A2S1ZAK6;A0A2U3RU80;A0A3Q8VP37;A0A2I8B3D9;A0A5H2UF49;A0A2U3RU64;A0A2U3RU54;A0A2U3RU56;A0A2U3RU59;A0A2U3RU60;A0A2U3RU62;A0A5H2UIC4;A0A3G6VF62;A0A2U3RUB4;A0A5H2UI97;A0A5H2UI90;A0A2U3RU66;A0A2U3RU67;A0A2U3RU77;A0A5H2UIF1;A0A2U3RU45;A0A2U3RU79;A0A3Q8SLM5;A0A3G5EDE2;A0A2Z5HT37;A0A3G2LWW4;A0A375B7I0;A0A3Q9JRD4;A0A375B7H1;A0A375B7F9;A0A346XQX4;A0A346XQV8;A0A5C2FTG1;A0A346HG04;A0A3S6RFG7;A0A386RVB5;A0A3G4YSC4;A0A387LC14;A0A3B1EVQ0;A0A3G2FPC8;A0A3G2FPS8;A0A3G2FPW9;A0A5B8KIJ8;A0A386NI10;A0A3G2YUZ4;A0A3G4R8Q9;A0A2U3RU83;A0A2U3RU89;A0A2U3RU93;A0A2S0SYY5;A0A5H2UIW4;A0A2U3RU35;A0A5H2UIX5;A0A5H2UIZ8;A0A5H2UJ23;A0A5H2UTN7;A0A5H2UIN7;A0A5H2UTV5;A0A2U3RU38;A0A2S0SYR1;A0A2U3RU96;A0A2S0SYR9;A0A2S0SYS1;A0A2S0SYT4;A0A2S0SYT9;A0A2S0SYU0;A0A2S0RR69;A0A2S0RR70;A0A2S1JLB7;A0A2S1NCF7;A0A2U3RU42;A0A5H2UTR9;A0A5H2UIL0;A0A2R4SAB3;A0A2U3RU99;A0A2U3RU85;A0A2U3RUA6;A0A5H2UTZ7;A0A2U3RUB3;A0A2U3RUB9;A0A2U3RUC1;A0A2U3RUC3;A0A2U3RUC6;A0A2U3RUA9;A0A5H2UI64;A0A3G2I6K2;A0A2I8B375;A0A2S0SYU7;A0A5H2UIR8;A0A5H2UIF9;A0A5H2UIV7;A0A2R7Z5J3;A0A2R4SDD6;A0A2U3RU88;A0A346HG07;A0A5C1YU02;A0A2K4N8E3;A0A2I8B3F3;A0A2U3T1M5;A0A2X0SEZ4;A0A5H2UF40;A0A2K4N846;A0A2U3T1M4;A0A2X0SR54;A0A2X0SE48;A0A2K4N8I1;A0A2X0SEL3;A0A2X0SES4;A0A2X0SE50;A0A2X0SEA0;A0A2X0SED2;A0A2X0SEH8;A0A2X0SEI8;A0A2X0SEM2;A0A2X0SEW3;A0A2X0SE40;A0A2X0SEP5;A0A2I8B3E2;A0A2U3T1N4;A0A2U9AEI6;A0A2U9AEJ0;A0A345F0V4;A0A2Z6DSE4;A0A2Z6DS95;A0A2Z5HU63;A0A2X0U3U8;A0A6B7HG62;A0A2Z2H1J3;A0A2X0U1N9;A0A2Z2GXK8;A0A2X0U3W0;A0A2X0U3V7;A0A3S6RFK8;A0A2X0U3J9;A0A2X0SR23;A0A2U3T1N6;A0A5H2UF33;A0A2K4N8H1;A0A2U3T1N1;A0A2U9AEP5;A0A2X0SER5;A0A2X0SET1;A0A5B9RAZ3;A0A3S6RFL4;A0A5A4LTX7;A0A3S6RFK7;A0A3S6RFL3;A0A2I8B3D1;A0A5A4LMG7;A0A3S6RFM0;A0A3S6RFM7;A0A3S6RFM8;A0A3S6RFN0;A0A346GBC4;A0A2X0SEU7;A0A3S6RFL7;A0A5A4LU26;A0A3S6RFG9;A0A2I8B3B6;A0A385FB93;A0A5B8HZP6;A0A385EJB8;A0A386NE45;A0A385H958;A0A5A4LTY0;A0A5A4LU16;A0A3S6RFK9;A0A3S6RFK4;A0A2K4N7W7;A0A2X0SEX5;A0A345F0V5;A0A3S6RFK2;A0A3S6RFH5;A0A5A4M3F9;A0A5A4M3E5;A0A5A4M3C1;A0A5A4M3B3;A0A5A4M3A3;A0A5A4LU34;A0A346DAQ7;A0A3S6RFI1;A0A3S6RFI3;A0A3S6RFI6;A0A3S6RFI9;A0A3S6RFJ3;A0A3S6RFJ5;A0A3S6RFJ8;Q29843;A0A2P9G7Q0;A0A2Z4BXA6;A0A2Z5HU98;A0A2X0SX88;A0A2X0RE89;A0A2X0RE84;A0A2P9G7M5;A0A2X0T233;A0A2S0SYT7;A0A2S0SYV8;A0A2S1B6P9;A0A2S1B6R5;A0A2S1B6R6;A0A2S1B6T7;A0A2X0RE52;A0A2U3RU97;A0A2U8QNU5;A0A2X0RD23;A0A2X0RD62;A0A2X0RE29;A0A2X0RE38;A0A2R4QL68;A0A346XQW7;A0A2K4X4I3;A0A2X0T4J0;A0A2R4QLB0;A0A2X0SXA9;A0A2R4KPE1;A0A2R4KPA3;A0A2P9G7Q8;A0A2P9G7L9;A0A2P9G7M0;A0A2P9G7L0;C1K0X5;A0A2P9G7M9;A0A2P9G7N4;A0A2P9G7N8;A0A2P9G7P0;A0A2P9G7J9;A0A2R4KPA5;A0A2R4KPE2;A0A2X0SX74;A0A2X0SX97;A0A2X0REQ2;A0A2X0REU7;A0A2X0REX1;A0A2X0RQE2;A0A2X0SX67;A0A2X0REE8;A0A2R4QL71;A0A2X0RD42;A0A2K4XGK4;A0A2K4XGK7;A0A2L0V4H8;A0A2K4X4I9;A0A2X0RD39;A0A2L1DGI0;A0A2L1DGK0;A0A2L1DGK3;A0A2P0W8G0;A0A2L1DGH7;A0A2L1DGH8;A0A2K4XGR8;A0A2K4Y389;A0A6B7KVE5;A0A2P1CQY3;A0A5H2UIN4;A0A4P2SRZ5;A0A4P2SRY6;A0A4P2SRT5;A0A383S1S7;A0A346XQW8;A0A2L1DGH1;A0A2L1DGH0;A0A2L1DGG8;A0A2L1DGG6;A0A2K4XGN6;A0A2L1DGH5;A0A2K4XGK8;A0A2K4XGN3;A0A2P0W8G8;A0A2K4XGJ3;A0A2K4XGM6;A0A2K4X4I1;A0A2K4X4H7;A0A2K4X4G0;A0A2K4X4F8;A0A2K4XGC6;A0A2K4XGL7;A0A2K4XGL9;A0A2K4XGN2;A0A2L1DGH3;A0A2K4XGM8;A0A2K4XGM7;A0A2K4XGD9;A0A2K4X4J7;A0A2K4X4K4;A0A2K4X4K7;A0A2K4X4M3;A0A2L1DGH6;A0A2K4XGN4;A0A2K4XGP3;A0A2P9G7P5;A0A2P9G7Q1;A0A2L1DGG1;A0A2P9G7T2;A0A7D3QEY3;A0A6S7YB32;A0A6S7XXN0;A0A6S7XV18;A0A6M8DGL1;A0A6M6CH05;A0A6G7NU98;A0A6G6CU50;A0A6C1I9M4;A0A7R8C2A3;A0A7L4X728;A0A6C1I9E6;A0A6C1HZE2;A0A6C1HZC8;A0A6C1HXF9;A0A6C1HXE8;A0A6C1HWE3;A0A6S7XV07;A0A6C1I5N0;A0A6S7XSP7;A0A6S7XUM4;A0A6C2E4F0;A0A858LGG7;A0A7D6IWC6;A0A7D7L8Y5;A0A7D7L9A4;Q5QT33;D9UAZ9;A0A6S7YBA5;E3UPC4;D2EBJ4;G9FZ34;A0A858LGH6;D9UB04;K0P2X1;H8XVX3;I3ZN89;A0A858B9B0;A0A7G7Y1U9;A0A7S9ATW1;A0A7R8C287;A0A7L7TUI7;A0A7L7TNK5;A0A7L4X7J6;A0A7L4X755;A0A7L4X752;A0A7L4X720;A0A6M8NNT6;A0A7H0XMC8;A0A7R8C2B6;A0A7R8C2C4;A0A7S5GRZ5;A0A2P9G7Q9;A0A7R8GUC4;A0A7R8C2F8;A0A7R8GUF0;A0A7R8GUG4;A0A7R8GUG8;A0A2P9G7S7;A0A2P9G7Q5;A0A2P9G7S3;A0A2P9G7R1;A0A2P9G7R0;A0A2P9G7Q7;A0A7R8C2B8;A0A2R4KP99;A0A5H2UIJ3;A0A6B7HHQ3;A0A5H2UJ06;A0A7R8GUC0;A0A7R8GUJ1;A0A7R8GUH3;A0A2P9G7U9;A0A2R4KPA1;A0A2R4KPB4;A0A7R8GUB8;A0A7R8GUB0;A0A7S5L7F1;A0A7R8GUC6;A0A7S5L7K6;A0A858B952;A0A858B987;A0A7T3P0R0;A0A7T7K9R1;A0A7U3NG83;A0A7U3VI70;A0A858B7G2;A0A858B884;A0A7S5L7P9;A0A858B996;A0A7R8GUA1;A0A7R8C2G6;A0A7S5GRG5;A0A7S5GRB2;A0A7R8GUK5;A0A7R8GUJ2;A0A7R8C2E3;A0A7R8C2E6;A0A6V6XYH2;A0A858B9A6;A0A7R8C2N2;A0A2L1DGG5;A0A2L0V4I6;Q546I7;A0A3S6RG43;A0A3S6RGG9;A0A3S6RGC1;A0A3S6RGB4;A0A383S210;A0A3S6RGB0;A0A383S261;A0A3S6RG84;A0A383S296;A0A3S6RIK8;A0A455JUC4;A0A455JSA8;A0A410JAM0;A0A3S6RIS9;A0A3S6RIM6;A0A383S2A9;A0A4Y5ULF8;A0A3S6RG54;A0A3S6RIK3;A0A3S6RIE8;A0A3S6RIB0;A0A383S1Y5;A0A3S6RGE8;A0A383S252;A0A3S6RG96;A0A3S6RGC6;A0A3S6RGC9;A0A383S2Y8;A0A383S3Z8;A0A4P2SS82;A0A383S3X0;A0A5A4LMX6;A0A5A4LL94;A0A493QP74;A0A583ZC31;A0A5H2UGR2;A0A5H2UGM9;A0A583ZC24;A0A383S1R7;A0A4P2SRK0;A0A5H2UG98;A0A5A4LK32;A0A583ZC25;A0A5A4LJY9;A0A5A4LJK6;A0A5A4LI97;A0A5A4LI25;A0A5A4LHX5;A0A5H2UG18;A0A5A4LK18;A0A5A4LJM9;A0A5A4LN61;A0A5A4LNF9;A0A5A4LNY6;A0A4P2SRF9;A0A4P2SRF8;A0A4D6P066;A0A4P8D7H4;A0A4P2SSE8;A0A4P2ST18;A0A455JW36;A0A455JW18;A0A4P2SRL5;A0A4P2SRP7;A0A4V0NP93;A0A4P2STQ5;A0A2K4XGN7;A0A4V0NP90;A0A4P2SUG7;A0A4D6NYX7;A0A4P2SU53;A0A4P2STX4;A0A4P2STA7;A0A4P2SRS7;A0A4V0NP86;A0A455JX05;A0A455JX07;A0A482LZY5;A0A4P2SRN2;A0A493QP70;A0A4Y5FSU2;A0A5H2UGI1;A0A583ZC42;A0A383S358;A0A3S6RG00;A0A3S6RFX8;A0A3S6RFU5;A0A3G5BD31;A0A3G4R8Q8;A0A383S467;A0A383S438;A0A3S6RFZ2;A0A383S393;A0A383S3C1;A0A383S1X7;A0A3S6RG10;A0A383S322;A0A383S1Y7;A0A383S305;A0A383S3R6;A0A383S3V0;A0A3S6RG19;A0A3S6RG64;A0A383S1X1;A0A383S1Z2;A0A383S1W9;A0A583ZBX0;A0A383S388;A0A4P2SRK7;A0A583ZBV8;A0A5H2UG11;A0A383S1X5;A0A383S3Z9;A0A455JVL0;A0A583ZC32;A0A455JVN9;A0A455JVU4;A0A583ZC08;A0A583ZBW8;A0A383S3Y9;A0A4Y7LMZ8;A0A3S6RG26;A0A5A4M3T5;A0A5C0QHA2;A0A5H2UFL9;A0A5H2UFN6;A0A383S400;A0A383S2M3;A0A383S2I0;A0A455JVN2;A0A3S6RG30;A0A5H2UII4;A0A6C0THJ6;M4QNN1;A0A223PYA7;A0A0S4T2P1;A0A0S4T2C9;A0A0S4T2B8;A0A0S4T273;A0A0D6K958;A0A0K8K5S4;A0A0S4T3H1;A0A0S4T3G2;A0A0S4T1D1;A0A0S4T1I4;A0A0S4T1H4;A0A0S4T3F5;A0A0S4T1G8;A0A0S4T1E3;A0A0S4T1D5;A0A0S4T183;A0A0S4T1K1;A0A0K8K5S5;A0A0S4T1F0;A0A0U2R0E6;A0A0U5IHT2;A0A0U5KKC2;A0A0U5PU85;A0A0S4T2U5;A0A0S4T3A1;A0A0S4T3I6;A0A173AD40;A0A223PY97;A0A1W1B6F6;A0A1W1B5N2;A0A1N7SXW9;A0A1Z2RTP9;A0A1Z2RTQ2;A0A223PY64;A0A1Z2RTM7;A0A1Z1VXF9;A0A1Z1VXG8;A0A0S4T1M1;A0A0S4T3D8;A0A0S4T1N7;A0A173AD97;A0A173AD55;A0A0S4T1R3;A0A0S4T1U8;A0A0B7NY91;A0A0B7NY86;A0A0S4T1J0;A0A0S4T1K5;A0A0S4T3F6;A0A0U5PUT0;A0A0U5PZ41;A0A0S4T4P6;A0A2K4N8I0;A0A060VCV0;A0A060VCY4;A0A060VD00;A0A0S4T1L5;A0A090KM89;A0A090KMB5;A0A090KM82;A0A090KKF6;A0A090KMD4;A0A090MEW2;A0A076FQ79;A0A060VG30;A0A090KF00;A0A090KEZ4;A0A060VHD5;A0A090KFY5;A0A090KFV0;A0A090KF14;A0A078MYS4;A0A090KF09;A0A090KKD3;A0A060VD21;A0A060VCV3;A0A0S4T4N4;A0A0S4T3P7;A0A0U5QLT5;A0A140DJD0;A0A140EXM1;A0A142J2B0;A0A0U5Q0D3;A0A0U5Q0E7;A0A0S4T4M2;A0A0S4T3Y6;A0A0S4T3M3;A0A0S4T3N7;A0A0S4T3Q4;A0A0U5Q0W6;A0A0S4T3U7;A0A0S4T3W5;A0A0S4T3I7;A0A0S4T400;A0A0S4T432;A0A0S4T452;A0A0S4T476;A0A0S4T4K2;A0A0S4T4M1;A0A0S4T3Y5;A0A1W1RN26;A0A2H4RKA7;A0A2K4X4F2;A0A223PYA3;A0A0B7NS21;A0A0B7NX46;A0A0B7NXX4;A0A0B7NX31;A0A098F818;A0A0B7NXT5;A0A0B7NXS7;A0A0B7NXT1;A0A0B7NY70;A0A0A8R5V5;A0A0B6VWU6;A0A0B7NS05;A0A0B7NNJ3;A0A0B7NNJ6;A0A090MEZ8;A0A286MC70;A0A0B7NNK4;A0A0B7NRY9;A0A0A1IX96;A0A0B7NNL2;A0A0B7NNN9;A0A0B7NRY4;A0A1D3KYM9;A0A6V6XYE0;A0A0B7NY75;A0A678ZX21;A0A238TP62;A0A140T930;Q2UVJ3;A2BF26;A0A140T9B3;A4H284;B3KW54;Q2HPN1;A0A140T9J9;A0A6S7XUK1;A0A0G2JH50;Q6R743;A0A140T912;A0A6B7IKJ6;A0A0B7NX39;A0A6B7HGA2;A0A0G2JIF0;A0A140T962;A0A0B7NY81;A0A1C3PI06;A0A1C3PI20;A0A1C3PHX2;A0A286MC81;A0A286MC78;A0A286MC75;A0A286MC74;A0A286MC72;A0A291HVI5;A0A286MC71;A0A1W1B5V1;A0A191XZN8;A0A1C3PHU4;A0A1C3PHX0;A0A1C3PHW1;A0A1C3PHW9;A0A1W1B630;A0A291NGI9;A0A2D1CHF0;A0A1Z2RTN3;A0A2H4RN76;A0A2H4RN94;A0A2I6SQU8;A0A286RSS5;A0A1W1B621;A0A286MC83;A0A1C3PHV7;A0A1C3PI74;A0A1C3PHV1;A0A1C3PIA1;A0A0S4T1H9;A0A1C3PI04;A0A1G4HPY5;A0A1V1IFP6;A0A1V1IFQ2;A0A1D0BSS2;A0A1W1B5H4;A0A1W1B5N4;A0A1C3PHT0;A0A1C3PHU7;A0A1W1B5T1;A0A1C3PHU3;A0A1C3PHZ3;A0A1C3PHT8;A0A1C3PHT2;A0A1C3PHR5;A0A286MC85;A0A1C3PHN2;A0A1B1FC03;A0A1C3PHX8;A0A1C3PHZ6;A0A090KF65;A0A6B7HGE8;Q7YQB1;A0A5H2UUG9;A0A678ZPS2;A0A678ZK82;A0A649ZUF6;A0A678ZWP5;A0A678ZK40;A0A678ZI36;A0A678ZI39;A0A678ZIA5;A0A678ZIB8;A0A678ZIE4;A0A678ZJV6;A0A678ZI12;A0A678ZWM4;A0A678ZIF5;A0A5P8NF88;A0A678ZIM5;A0A678ZIN7;A0A678ZIQ6;A0A678ZJG8;A0A678ZJS6;A0A678ZIJ6;A0A678ZII3;A0A678ZIJ1;A0A678ZXS0;A0A678ZXP6;A0A678ZXL9;A0A678ZQU9;A0A5H2UJH2;A0A5H2UU47;A0A678ZWF6;A0A5H2UV22;A0A5H2UVT5;A0A678ZWC3;A0A678ZWA2;A0A678ZR52;A0A678ZQZ9;A0A678ZQV7;A0A5H2UVP0;A0A678ZIL8;A0A678ZQI8;A0A5Q2WW29;A0A678ZXX5;A0A5H2UUZ0;A0A5H2UZF6;A0A5H2UZE4;A0A5H2UZA9;A0A678ZHS0;C0LNY0;A0A678ZWH0;A0A6C0WYP7;A9X165;B1PWE4;O78179;A0A8E4J399;A7UM82;A0A8E4J380;A0A896SZ68;A0A896SZ41;A0A858LNM4;A0A858LJG9;C9E8V9;A0A858LHI7;A0A896SZ92;Q0PHP6;A0A858LK87;Q1M2U3;Q29987;Q52QV2;Q52QV3;Q53X46;Q546I6;K7DWB0;D3XQC3;Q5RIP0;Q6IUU7;A0A8E4J5S7;A0A858LGJ1;B6ZBY4;A0A8F5IUP7;B8YJM6;A0A5H2UJ13;A0A6C0TFP7;C1K0X4;A0A2X0REJ0;A0A858LHE7;A0A858LH41;A0A858LGR6;A0A8F4WFP9;A0A8F4WI18;C5IYE7;C9E8W0;C5IYE6;C4PKH3;C3VIR6;C1KC12;C1K0Y5;C1K0Y1;A0A858LHF4;A0A858LHG5;A0A858LHH9;D3K0R1;A0A5H2UV17;A0A5Q2WVN9;A0A0B7NX34;A0A5H2UU78;A0A6B7FV89;A0A6B7FU76;A0A679A1R0;A0A6B7IJF8;A0A6B7FU59;A0A6B7FU17;A0A6B7FU06;A0A6B7FTX9;A0A6B7FTQ8;A0A6B7FUM4;A0A6B7IJK9;A0A6C0TDF0;A0A6B9VPP5;A0A6B9VRB5;A0A6B9VRE1;A0A6B9VRG8;A0A6B9VRR1;A0A6B7IJQ6;A0A6B7FUV1;A0A6B9VUL7;A0A6C0SEE2;A0A6C0SEE3;A0A6C0SGF2;A0A6B7FVD7;A0A6B7FW40;A0A6B7FWV0;A0A6B7HGG4;A0A1C3PHR3;A0A6B7HGD1;A0A6B7HGG2;A0A6B7HGM7;A0A6B7HGH1;A0A6B7HGH9;A0A6B7HGI6;A0A6B7HGJ0;A0A6B7HGK0;A0A6B7HGK6;A0A6B7HHP9;A0A6B7FWV2;A0A2K4X4E0;A0A6B7IHE1;A0A6B7IIW9;A0A6B7HGE0;A0A6B7HGD3;A0A6B7HGK7;A0A6B7HGC3;A0A679A236;A0A6B7FTL8;A0A6B7HFM5;A0A6C0SH40;A0A6C0SHF6;A0A6B9VUP1;A0A5J6CWB6;A0A5H2UZU6;A0A6B9MTA2;A0A6B7KXK6;A0A5H2V214;A0A5H2V219;A0A5H2V290;A0A5H2V2J9;A0A5H2V2L5;A0A5H2V2L8;A0A5H2UZV2;A0A5J6CWU9;A0A5H2UZM2;A0A5K8ANZ5;A0A5H2UZJ6;A0A5H2UZH5;A0A5H2UZH0;A0A5H2UJ39;A0A5H2UJ80;A0A678ZWC5;A0A5H2UZL3;A0A5H2UJD9;A0A5H2UU63;A0A5H2UZU1;A0A678ZXT1;A0A6C0SEB9;A0A6B9MMA0;C1K0X3;A0A6B9MXL2;A0A6B9MSG3;A0A6B9MSE7;A0A6B7IJS1;A0A6B7IJX3;A0A6B7IJZ6;A0A6B7IKM2;A0A6B7KQA8;A0A6B9HSI9;A0A6B7IJN4;A0A678ZY76;A0A6B7KVF0;A0A6B7L1N0;A0A6B7L1N6;A0A6B9HQ55;A0A6B9HQW0;A0A6B7KQB7;A0A6B9MYK3;A0A6B9MQ82;A0A5H2UZW8;A0A6C0TE54;A0A6B9VSG6;A0A6B9KAJ9;A0A2L0V4I2;A0A583ZBC1;A0A583ZBB2;A0A060VG62;A0A125RL88;A0A1D3TZM5;A0A1V0EFG1;A0A1V0EFG5;A0A1V0EFI5;A0A1X9ZEH3;A0A2K9VPU0;A0A0N7F200;A0A7S5L7P0;A0A2K9VPU4;A0A2K9VPU5;A0A2K9VPV0;A0A2K9VPV7;A0A2K9VPW3;A0A2P1CQH4;A0A2S1ZAK4;E3WHS6;I4EPA6;I2GAE0;A0A6C0TDD0;A0A2K9VPV8;A0A0A1IX94;A0A0M7BFM3;A0A090MF30;A0A218MK88;A0A455JVP4;A0A2K9VPW2;A0A3S6RF43;G9MCL5;F6IQL9;A0A2L0V4I5;A0A5Q0TX06;A0A678ZGX7;A6Q0R4;B1GYE6;A0A6B7FT97;X5JRV1;Q96FQ5;A0A090KME2;A0A6F8VIG4;A0A6M6CJC3;A0A858B824;A0A866W2K2;A6Q0R5;B0BKZ5;A0A649ZV41;A0A5H2UTA1;A0A4P8DKR2;A0A482PB03;A0A346FLH7;A0A345FAC5;A0A343J2L6;A6YS07;B2G4X0;A0A6B9HS77;A0A140DD52;A0A7L7TX75;C8CBY7;E0WN92;A0A376A957;E0WN40;E0WN58;E0WN49;E0WN25;A0A3T1BAH1;E0WMY8;E0WMP8;E0WMN0;E1CJE3;D7GNM6;D6CIE7;A0A060GTH7;A0A089N0V0;A0A2Z5ZN17;E1CJE2;E1CJE5;A0A6F8VIA5;C6H0N1;B7VCC4;C7C5U0;B5AH69;A0A8F4G6N8;A0A7D5DUP5;A0A7D7Q764;A0A6G8QHW2;C7EY82;A0A6C0TJ98;E1Y6M5;A0A583ZC39;A0A515HFK4;A0A514YDT9;A0A514YDS2;A0A514YDP5;C7C6F5;A0A6C0TJ04;E0WMM8;B6VPZ4;A0A3Q9WYH3;E0WMT8;A0A0G3EM65;A0A2Z6ICR0;A0A180K1I8;A0A167RMR1;A0A143Y4S4;A0A142J406;A0A0S1S0E7;A0A0N9QYG1;A0A0N9MPD2;A0A0G3ENZ7;A0A1W7INZ2;B2DFX0;A0A292G0K0;B2DFW9;A0A292FP66;A9JIG5;A9QVM5;B0BKZ6;B0FYW2;B0LL97;B1PWD3;A0A1C9ZYR6;E1Y6P5;D1J6P9;D3HUM0;A0A2Z4LG72;A0A0A0U836;A0A292G1H1;A0A0A7RYM9;A0A0F7NJ09;A0A0F7YY45;A0A2Z5ZMV3;A0A2Z5XAE7;A0A2Z5XAE0;A0A060H0F5;B2NJ14;F8LFN2;Q7YPH4;Q7YQ36;A5HDH6;B2NIZ5;C7C5G9;C6KF33;D9UC06;A0A654E5D0;A0A4P8PMR2;A0A7T5V785;A0A7T5V780;A0A7T5V777;B1A4T5;A0A7S7BDM1;B1AA54;A0PCH7;A4HQM5;A3KLI7;A0PCH6;A1KWR0;A1Z0M3;A2TDT1;A2Q118;A2Q119;A2VBX9;A2VBZ9;A2VC07;A2VC08;A4URH0;A0A2K4UQ61;A0A140T951;B4DUK6;A0JCS1;A0MNW2;A0A167RN94;B1PZ64;A0A125SU93;A0A8G0VH47;C5J3R3;A0A140DD53;A0A140CTI7;A0A167RN75;A0A140CQI2;A0A120N5Z8;A0A120N5Y6;A0A110BIS2;A0A1B1XVD8;A0A110BIM8;A0A110BH73;A0A0Y0UTC7;A0A0X8XVK9;A0A0U5AGC3;A0A143Y1S7;A0A143Y3Y4;E1Y7F9;A0A167RN61;A0A140GMH8;A0FIZ3;A0A8F4GAG1;A0A8F4GDV6;A0A142IGX1;A0A142J2H6;A0A142J2H7;A0A142J2H8;E3Q0Y4;A1EAG1;A7XBN3;D4P942;B5U8K0;B5U8C8;B3GUH7;B2DG04;B2DG01;A7UM86;A4ZVL4;A8E0S0;A7XNK1;A7XBN0;A7UM66;A7WPJ1;A7WPJ0;A7UDB3;B2NJ15;B6EBD9;B7VFE3;B7VU68;B7XH59;B7XH60;B7XH61;A7UM87;A6BML9;A8E0Y6;B2CSI1;B2CY72;B2CY73;B2D0I5;A9J7N0;B2DFX1;B2DFZ8;C0KLS9;A8YQG9;A8YQF1;A8E0Y5;A5PI54;A4ZX99;A5PI53;A7MAK1;B6EBD8;A6N842;A6N843;A7MAD9;A7MAE0;A7MAK0;B2DG00;B8XPR9;B9VRL1;B2NJ19;B2DG29;A0A348HAS0;A0A1B4ZAZ0;B2NJ17;A4UQL5;A4USG3;B2G3G5;B2NIZ4;B2NIX9;B2NIX8;B2NIX7;C0SVZ4;C1KBJ8;C3VIU8;C5J3Q8;B3GCI4;B2Z8W4;B9VSJ9;B6VAX8;B2DG08;B2DG02;B2DG10;F5CR33;B2DG11;B2DG25;B2DG26;B2DG27;B2DG28;B2DFZ9;B2DG09;B2DG30;B2MW44;A0A109RSQ3;S5CK34;S0F2B2;T2DL37;Q3YFF4;B3W6N3;Q9GIX4;A5PHP6;A0A3S8UVL2;A5PHP5;A4GWZ2;U6EGG8;I7JHQ8;S5TDV8;Q56H30;A0MSS3;B3GV26;D9UAZ6;A0A2R4RN18;A4FSH4;A0A1D3TZM0;A0A0H4LY29;A0A0K3AQT5;D9UAY7;A0A4P8PBH5;A0A4Y6GU94;Q4U4M8;A0A1D3TZM4;A0A7I8AUN1;A3FP42;P79497;W1IAW1;Q4QZ17;W6N8T7;T1SRM5;T1WF48;A0A7I8AVN6;M1GLN3;D1MZU0;F4NBU6;A5A163;Q6SZ68;E3Q1H9;Q5G0G2;A0A2Z4LZ16;Q0MX32;Q56H29;A0N001;G3CCE5;E3Q0Q8;F4NBU7;A3F720;F4NBU1;A0A060D9N2;Q861F5;B2NJ40;G3ETQ6;A0A2R4RN24;D6CIC6;A0A1L7NQ70;Q4JLV9;A6Q0R2;A0A2C8D147;F2VS03;A0A4U8Z830;A0A8F4G964;C1K9J3;D9I8N4;A0A290G4C7;A0A7S8WJX7;S4VCD5;D2KMV9;D9UB28;C1KAF0;A3F718;A0A1D5B139;A3F719;C7E2U5;S5LQY8;S6BHQ7;D1MZ01;R5AK10;F4YTE2;Q29866;F4YTE0;B7VGE9;Q5W3L5;R4ZGR0;A0A143Y4M2;B5ARH3;R5AK04;A0A2P1CQH5;Q5ND74;E3VSS8;F0VRW0;O19657;F4YTE3;F4YTF4;Q1XDY2;F5ATB1;A0A0P1IVS1;F0VYJ3;M1XGM5;Q4F7G5;B1GYE9;A2RQE1;B1GYE8;A0A1X6WJC9;F4YTE4;I2GAD8;Q95IE7;A6YT90;A0A3G6II09;Q8SNC1;A4Q972;A4Q971;A0A1D3TZL9;C0KZ88;A0A1W2PRZ0;Q29948;F4YTC5;Q7YP32;I1VH01;D9UAY5;D9UAZ1;D9UAY4;A0A583ZBW9;A0A0B7MAY8;A0A583ZBR5;A1YWK4;A4URH7;A0A3G6V6Y8;U4N162;Q95350;Q95349;A0A1B1VTC3;R4ZGQ8;D9UAZ2;Q95351;A0A7G3KIN2;L8E9Q0;Q6ZYB9;R4ZGQ9;A0A2L0RIP1;F4YTC4;R4ZGR4;A0A0D6K9C0;D6CIC4;O19655;F4YTG5;F4YTC7;F4YTF0;D9UAZ0;R4ZGR7;F4YTD8;A0A583ZC02;A0A583ZC03;A0A583ZC04;A5PHT8;N1NFJ0;A0A0S2KQY6;A0A0F7QZE6;A0A142J1V6;H6SI89;T2MKA4;T2MJP9;U6EFV3;R7RTM7;Q9TPQ0;R5AK17;Q7YQ45;Q9GJF5;R4KW00;Q9UE94;R4RWW2;R4MU36;R4NA36;T1WF39;W6SJH9;W0G8H1;M9T3Z4;A0JKD1;W0G8H6;R4L5C3;R4MS49;U6C266;V9VAM7;V9W407;R4L6H2;W0YKF2;R4NK37;R4N4G0;R9YI90;Q860B7;Q9BCT5;U6ER56;V5L351;Q9BD03;A0A7D9BVQ7;A0A5K0UCM8;A0A387L8J0;R4N0R6;R4U4H5;R4N0R2;R4NBX1;V5NQE9;V6BP59;U6EV26;U6EUE7;U6ETS3;U6ETR8;Q8HWL6;Q8WLS2;S4VGP7;W6SL23;U4Q5A9;C0L0E6;B8Y4R9;Q9GJF1;R9RIB4;W0GCL4;U3MMY2;R9RUW0;R7RVA4;Q9GJF6;U3N7V6;U3PX30;Q8SNC8;A0A2Z4HTY3;S0F0X7;S0F2I7;Q29937;A0A583ZBA2;T1WEN4;S6AQL6;R9USF5;U3MYE2;A0A2Z4LI59;Q0GF39;G8FT56;S6C5A5;U5XVD3;R9UQX1;U4PSC0;W8TKG1;X5EPI2;W0GBI5;W8NT44;X2J867;W8XWP2;W0GCL9;W0GCP1;W0GCP4;Q8WLS3;W8SMD3;W8SW77;W8XWJ3;W8GIU3;Q8SNC9;R9RFL0;Q95IB3;Q95IY4;W0G8J4;X2JR57;W8T046;W0HHM6;X2JJP1;Q8MHP6;W5VXV3;A0A1B4XT82;A0FIZ4;B6ED01;Q1PAF7;Q1MW39;Q1XDZ2;Q3LSM8;Q3LU32;Q29642;Q15JB2;Q4F7G8;Q3LSM9;Q4F7G6;Q45XP6;Q0GGL8;Q45WA4;Q3ZUS8;Q4A1W0;Q1T719;Q1T720;Q4W6B9;Q6F3H8;Q4VZZ4;Q4W5U1;Q1XG70;Q6F3H7;Q6F3G9;Q70FD0;Q1XG71;Q1EPW1;Q401C8;Q5NT48;U6ERN2;C8ZLL2;D1H0T6;F5BX13;F5BWX2;F5BFH3;F8LFN4;F4NCC0;D1MH25;F8LFN7;F5B9I3;D0AB32;F5B9H7;G9IBU5;F5B4I5;F4NC95;F2XI40;F2XI42;F2XI43;F2XI44;F2XI45;F2XI39;D0V0N1;I0DFJ4;Q2HPY2;Q2L4W2;Q2L4W9;Q2WCC1;F8LFN3;Q306H4;Q306J9;F8LFN6;C9EI95;F5BH03;F5BH04;F5BSL9;G9IIU9;G9IBU4;F8LFN1;F8LFM9;F6IQ92;F6IQ78;A0A6B9VTQ9;Q9GJ38;I6QND5;J7QJV5;J7I188;J7HKQ5;J7HI06;J7HH07;Q75NT9;Q0ZAX5;Q0E9R1;I2G867;J7QDG3;J7JQD7;I7HHI0;I7ID09;I7L1P5;I7LP08;J7G1Z4;I7HFK0;I7H7K5;J7QID7;J7RT51;J7I9M0;J9UMP6;M5EE36;I4IY67;I4ENX4;I3TBB4;I2GUK4;I6YAZ9;F2XI41;J9S2M4;F4NBP1;J7RE59;J7RMN3;J7RT46;J7S4C1;Q6AW24;J7S4C5;J7SAX4;J7SBL1;J9R4R9;Q75NT8;Q6IVJ2;Q7YNX5;Q4ZG95;Q5JZI4;Q1MW38;Q6F3H9;Q6F3I0;Q6F3I1;Q6IV50;Q6J4L1;Q6F3D5;Q4W6C4;Q6J4L2;Q6Q0M4;Q6F3G8;Q6F3G5;Q6F3G4;Q6F3E1;Q6F3E0;Q6F3D9;Q53TZ9;Q5PS30;Q5S752;Q5S268;Q6F3D6;Q5R1M4;Q5NTB1;Q5NTB0;Q5MD87;Q5KQR9;Q5K1Z3;Q6F3D4;Q75NU2;Q75NU4;Q5XNP8;Q5XL22;Q53TZ8;Q75NU3;Q3LAZ3;F5B4I4;G9HZ40;E9RKA8;E1Y7D4;E1Y7D3;E9BVF4;D2KZ26;E9RK89;E9RK90;E3Q0X2;E9RKA5;E9RKA6;E9RKA7;E9RKA9;E9ABX5;E3Q1J0;F0VRW1;F1CGT1;C6L833;E9ABI3;E2D8Y1;E3Q0X1;E3Q0X3;D1MYZ3;E1Y7G1;E9ABX6;D6CJD1;D2KZ25;E9RK88;D2KZ24;D2KZ23;D2KZ22;D2KLA4;D1MZU2;D1MZU1;Q5UGI4;A0A1W2PS56;D6CJD2;E9ABX7;D6Q0R3;E1Y7D2;E7CYP3;E9RJS4;E9M386;E9M1F0;E9LWA6;E9BVW0;D6CIN1;E9BVF5;E9RK93;F8LFN5;C9YSQ4;H7CHW6;C6KEB2;H7CHW5;H7CI02;H7CI03;H7CI04;H9B8Z1;H7CI01;Q256S0;H7CHX1;C6L832;H9BIZ7;H9BAN3;A0A1W2PP77;H7CHW9;Q9MY68;Q5QR53;H7CHW8;E9ABX4;D1MZ09;H7CHW7;C6H0P6;E3Q1J2;E7BBA5;E3WH36;E3WH37;E3WH38;E3WH39;D1MYX6;D1MYX7;E5FYN0;E7BBA2;E7BLC9;E1XUP8;E3Q1J1;D1MYX8;Q5NT47;Q8HWG0;H7CI00;H7CHZ9;H7CHX0;H7CHW4;C6L831;C6H0P5;D2U545;D2U6Y8;D4II60;A0A140T9A9;G9G830;H2EL73;C7DRS0;A0A140T9G0;H6SFV4;H6SSQ3;A0A140T9H3;H6UWY6;H6V7K0;H2AM02;H3K398;C7C3M7;F8WS76;A0A1W2PRX1;K0P2R8;G5CBS6;H2AM46;A0A140T9S9;D4II61;F8LFN8;D1MYZ9;F4YTF3;F4ZZU5;G9I1P4;F4ZZU7;U6EFP0;F4YAL4;F5B2N8;F2XI38;H2AM01;F8LFN9;C7EX07;F5A500;F1CK29;E0WMN3;U6EFS2;E0WMM5;G9FXM6;H3K396;G4V4C1;C7DUX4;G3LHV2;E1Y422;H6SSQ2;D1MYZ1;D9UAT3;G9DBG5;E0WMY5;E0WN66;E0WQB2;E1XUI5;D7GM42;D9UAX7;G1UK08;E1Y6P9;D1MYZ0;E1Y6U0;E0WMY6;D9UAX6;E1Y6M4;M5A7P5;A0A0H5DBU6;D5L2Y1;F2XI37;D9UC13;D9UAY0;D9UAX9;G1DHD3;G0Z6Y5;G0WJE9;G0M6G0;G3CCB5;F4NC93;C6L834;E0WMW0;E0WMV9;G9DBG7;G9DBG8;G9DBG9;G9DBH2;G9IIV0;C8CH44;D1MYZ2;F2RM42;D9UAX8;I6M4H7;A0A182ATM1;A0A3Q9X1I9;A0A1C3L6G3;A0A1P8SNK2;A0A1L4FR13;A0A1C3L6C5;A0A1G4HPT5;A0A387LAN5;A0A387L9Z4;A0A387L8U0;A0A345BDY9;A0A1C3L6C8;A0A1L2D2B1;A0A3S8UVH7;A0A1G4NR61;A0A348HAQ6;A0A348HAR0;A0A348HAR7;A0A348HAR8;A0A343J4W3;A0A348HAR9;A0A1W7IP33;A0A348GSH6;A0A1G4NQY5;A0A3S8UVI9;A0A1C9ZUN1;A0A1G4NQU8;A0A3G2JRR0;A0A2R4LVM6;A0A290Y5W4;A0A286R106;A0A192ZHK6;A0A3Q9WTK6;A0A3Q9DAP4;A0A3Q8U713;A0A1E1FFW2;A0A1G4HPS4;A0A290Y5V9;A0A343J4W2;A0A1C9ZUT9;A0A1B4ZAY6;A0A2S1B6P5;A0A1Z1N309;A0A286R0Z9;A0A286R102;A0A343J4W4;A0A0N9Q873;A0A3Q9X0D3;A0A3Q9X1U1;A0A3Q9XXZ5;A0A1G4NQV0;A0A1G4NQT5;A0A2D1WB99;Q1G0L6;S5DLE2;Q2UV91;S5DLE7;S5DLH0;S5DHR6;S5DHQ1;S5DHP3;S5DHP0;M5ETC5;S5DLG6;R4RUJ2;S5DL83;S5DI47;G0WJF3;G4V595;S5DI37;S5DI24;S5DI19;S5DI14;G5CJS3;S5DHU0;G4V594;S5DLD6;S5DI56;A0A385H557;R4S840;A0A387L8C4;A0A348HAV3;E3Q0Y2;Q7YPH5;Q2UV92;Q2UV93;Q5R1M1;R4RUI3;R4RWV9;S5DI53;R4S846;G4VTY3;R9RFL1;R9RIA8;R9UU99;A0A0H5CVR6;A0A6B9CGR4;A0A6B9F4V1;Q09GE6;N1NT51;N1NRY1;G8G137;A0A2R4KZU6;A0A2D3BHS4;I6RVJ2;A0A0K2GUM4;A0A0N9MPC4;A0A0N9MQY3;A0A4Y1YSD2;A0A0U2YQU7;A0A1B4XVI6;A0A0N7FRR0;A0A0K2GUY1;A0A0N9R1F6;A0A515HFN5;A0A0K2GUM5;A0A0K2GUL8;A0A0K2GVF2;A0A0K0QVX4;A0A0N9MQZ5;A0A0N9MR62;A0A0N7FRR1;A0A0K2GUN1;A0A4Y1YSE1;A0A0S4L2T4;A0A0S2UQD6;A0A0S1RW44;A0A0S1LG07;A0A0N9MI69;A0A0N9MI60;A0A0N9MVH4;A0A455WIQ1;A0A140CTI5;A0A1B1UZL5;A0A1B1UZB8;A0A1B1UZB6;A0A1B1UZB5;A0A1B1UUG9;A0A192ZHL1;A0A1B1UTT9;A0A0U2ZJ44;A0A455W905;A0A191T7X2;A0A0N9M6L7;A0A182AU56;A0A182ATP2;A0A1B1UZM8;A0A167RN89;A0A167RN79;A0A0N7G7C8;A0A0N7G7D0;A0A0N9M6K3;A0A583ZBK5;A0A0N9R1T7;A0A0N9MHY4;A0A2S1B6D2;A0A1C3L6C7;A0A2Z5ZND7;A0A1P8YVW0;A0A2Z6ICM3;A0A2Z6ICQ8;A0A2Z6ICV7;A0A2Z6ICX8;A0A2Z6ID83;A0A1S6GL05;A0A1W6LWH8;A0A1W7INY8;A0A1W7IP42;A0A2Z5ZMJ5;A0A2I6ZCW9;A0A2P1CPV9;A0A2P1CQ60;A0A2P1CQE0;A0A2P1IUQ8;A0A290Y5X1;A0A3Q9WVJ8;A0A2R4LVN5;A0A2S1B658;A0A343J4V6;A0A1P8SNK5;A0A2Z5HVJ5;B2NJ16;A0A0N9Q867;A0A0N9R1E3;A0A1S6GL35;A0A0N9QZ02;A0A0N9QV62;A0A0N9QV50;A0A0N9QNJ5;A0A0N9QHU8;A0A1S6GL10;A0A0N9QHU3;A0A0N9Q8M9;A0A0N9MVK2;A0A1P8YVW3;A0A0N9QWG7;A0A0K0PYY3;A0A1B4ZAX9;A0A1S6GL14;A0A2Z6IHX2;A0A0N9QZ10;A0A2Z6IF26;A0A0U2NV12;A0A1S6GKY9;A0A1S6GKY7;S5DHS8;S5DHR9;S5DI40;L7URE3;M5EF56;U6EFV2;K4UNL4;L7QJG7;K7X3R1;M4QG06;L7UY17;L7UY14;K7W971;M4VLN4;A6N5Y9;L7QJN0;L7QJ92;L0BWC1;L0BUI6;K8ESB1;L7QJN1;K4UF67;I7B0X5;I6YW25;N1NUU1;C6H0P4;C5J3U2;K4MQ44;S5DN96;S5I324;S5TLC0;S5DN86;S5DN61;S5DN50;T2B9H9;T2MJ89;U3RD07;U5TRL0;S5DN56;U6BZR6;S5DN91;S5DTZ7;D1MZ00;M4VLN9;M4Y2P8;X5FFQ3;W0NQ35;V6CJI7;U6EUF0;M4WJD1;K4N0X3;M9TGD7;S5DLH6;I7GGT2;I7H7T3;I6YW19;K4ISM7;K0PB47;K0P791;I7GUM5;I7GQ37;I7H0B8;I7B4Y7;K4ML26;I7A3E6;I6ZW87;I6ZW80;I6Z477;I6Z474;C6H0P3;M9WLY3;K4PXS1;I6TKJ3;N0AAS5;N0A2V4;N0BQN4;M9TGE2;N1NV67;M9TME8;N1NUT7;M9TNT0;Q06BD1;M9ZRM2;N1NSZ5;N0A944;N0BSI6;M9ZZ98;N0A0P4;N0A0S7;N0A0T3;N0BX80;N0A2U9;N0A4G2;N0A4G7;N0A939;S5DU33;S5DU27;S5DU24;H2ALZ9;I3TBB9;I6RAH1;A0A068PCV8;I7A6W0;I7GSS2;I7GVS4;I7H542;I7HDU6;K4ULG4;H6SSQ4;H2ALZ7;I2GUK8;G9MCL4;G9G7Y5;I7H1H3;Q09JY6;A0A068PF82;A0A076VJD6;A0A077HBK1;A0A077YF27;H8XBU0;A0A078BNN6;K8ESP8;I1V1X0;S5DU19;F5CR31;L7UZX8;S5DHT7;A0A0F7DDK1;F1C8N6;E3Q1I1;M5DCF8;S5DI43;G0UDG4;A0A6C0TJF0;A0A6C0TJR3;E3Q0Y5;A0A0H3YCC4;F4ZZU8;G0WJF2;F2XI59;E9ABX8;E9ABI4;E7BBA4;E3Q1I3;F4NC92;K4UNA5;A0A023T5V9;A0A090K2C7;S5DLJ6;S5DLI1;A0A0A1GK28;A0A061CMV3;A0A0F7WA85;A0A0F7RND5;A0A0F7ILQ0;A0A0A0YKE9;A0A0F7GWV2;A0A0G3EHC5;A0A0C5CDV5;A0A0B5CZ67;A0A0A1GPV2;A0A0A1EDG2;A0A0H5CW80;A0A0F6TLB1;G4V596;S5DHS4;S5DLJ1;S5DNA5;S5DTD9;S5DTZ1;S5DTZ5;S5DU16;S5DN81;A0A068EQF7;A0A0A0YP92;A0A0C5BUF2;A0A0H3W5K7;I2GUK5;G8ZKX2;A0A089PAU6;H8XBT9;I6QNT6;A0A068J6T1;A0A0H3W563;A0A0H3W5K6;A0A061CKU3;A0A060N2L5;A0A060N0U0;A0A5J6BTH8;G8GW80;A0A5J6CWL3;A0A0H3W570;A0A059WRJ1;A0A090KJ24;A0A090LXA5;A0A097PEB8;A0A098GY48;A0A060GU53;A9QUT8;Q861D2;Q861D1;A0A1C3PHV5;A0A1C3PHW4;A0A076V767;F4YTG2;Q861D6;Q861D5;A0A1C3PHX5;A0A0B7MH47;A0A1C3PHY3;B9VWB1;A0A1C3PHZ9;Q9MYI2;A0A0D6E1V4;A0A0B7MB31;A0A1G4HPV5;Q5QR49;Q8HWR0;A0A1C3PHK3;A0A1C3PHU5;C0KZ89;A0A1C3PHK8;A0A0B7MGC3;A0A2I7FSU5;A0A2I7FSU8;A0A0B7MH39;S4VFS7;E0Z0E2;A0A2S1ZAM4;F4YTE9;A0A0B7MGC9;A0A0B7MGB5;A0A1C3PHN4;A0A0B7MGA6;Q861D4;Q5QR47;A0A0B7MB46;Q8HWQ3;A0A142J2H2;A0A142LRG6;A0A1K1TA07;A0A1C3PHM8;Q5QR38;A0A1C3PHK6;Q7JGR9;D9UAY9;Q5QR35;Q2LC90;Q5QR48;Q7JGS0;Q7JGS1;A1XAM5;A0A583ZBW2;D9UAY8;Q5QR51;Q5QR54;Q5QR55;Q5QR56;Q8MHM7;D9UB27;Q5QR57;V5NRG5;O19677;Q5QR37;F4YTG6;Q5QR39;A0A411DVA1;F4YTG3;A0A167RQK8;J7FV22;Q5QR41;Q5QR43;J7FZQ3;A0A060IP86;A0A160YHR7;A0A1G4P1X3;Q5QR40;Q5QR44;Q5QR45;Q5QR46;A0A7G7Y9G1;D6CIB8;J7FTC9;A0A4P8PQU3;A0A2I7FSU2;A0A6V6XYL5;A0A1C3PI05;W6JM27;F6IQI8;F6IQI7;F6IQI6;F6IQM6;F6IQM7;F6IQM8;F6IQM9;F6IQN0;F6IQN1;F4YTG1;F6IQJ0;B4XKD1;F6IQH8;F6IQM2;F6IQH5;F6IQR8;F6IQR7;F6IQJ3;F6IQH6;F6IQM3;F6IQI9;F6IQJ1;A0A0B7MB43;F6IQR6;F6IQQ6;F6IQQ7;F6IQQ8;F6IQQ9;F6IQI2;F6IQR0;F6IQP7;F6IQR5;F6IQN4;F6IQH4;F6IQN2;F6IQI0;F6IQR1;F4YTF6;A0A060VHE3;F6IQJ5;F6IQJ4;F6IQN3;F6IQM4;F6IQM5;Q861C8;A0A1C9UPQ6;A0A0B7M9U4;A0A0B7MHZ0;F6IQH7;A0A060VG64;A0A090KF41;A0A1D0BU97;A0A097ZQV5;A0A0B7M9U8;A0A1C9UPQ9;A0A1C3PI08;C9E311;A0A0B7MH26;A0A0B7MGD3;A0A0B7MGD5;A0A0B7MGE0;A0A411G9Y9;A0A0B7MGE7;A0A0B7MGZ1;F6IQR3;A0A0B7MH17;A0A0B7MHZ7;A0A0B7MI02;A0A0B7MI07;A0A0B7MI08;Q95HA7;B6VAW4;Q8MGY9;Q9MYH8;Q861D0;A0A0B7MH42;Q6ZXT6;A0A128DYW3;F6IQJ2;A5LIC1;I0JGT8;A0A0B7MI12;F6IQH9;A0A090KEW9;Q5QR59;A9JPG2;Q5QR60;A7LB38;B2DG03;A0A1D0C3Z1;A0A1Z2RP29;A0A1Z2RP33;A0A173ADA9;A0A173ADD5;A0A173ADE8;A0A0S2IKZ7;A0A0S2ILF3;A0A0Y0BQH0;G0ZE05;A0A173ADB5;A0A173ADA6;A6H579;A0A191XZD2;A0A1D0C3I1;A0A1C3PHM2;A0A1C3PHM4;A0A0B7M9V3;A0A0C5K610;A0A075MGT0;A0A1A7G6U7;A0A191XZP2;A0A191XZP0;A0A191XZD0;A0A173ADA1;A0A191XZC1;A0A191XZB9;A0A191W087;A0A173AD94;A0A1Z2RP51;A0A1Z2RP60;A0A173AD95;F6IR17;F6IR21;A0A1C3PHI4;A7MAP7;A0A7G1KZ10;U6BR78;Q5D1W9;F4NBX9;F4NBX5;F4NBX7;I4DCY7;Q70KF9;A0A1C3PHI3;A0A866W3D0;A0A1C3PHH0;B0JF24;A0A1C3PHI7;A9JPE8;A0A1C3PHI2;A0A1C3PHJ2;B5U8D0;A0A1C3PHJ0;A0A8F2EV94;A0A1W5LVZ2;A0A173ADG8;A0A8F2J8E4;A0A1G4HPX5;A0A088MI97;A0A1D8MAP9;A0A1G4HPV1;Q5QR52;I4EC43;A0A1G4HPR8;A0A2U8T8Y7;A0A1C3PHL6;A0A1G4HPY9;A0A1D0BZT1;A0A1D8MAS2;A0A1D8MAQ1;A0A1C3PHL3;W8YE50;Q5QR36;Q5QR50;O19589;Q8SNA8;A0A1C3PHK5;A0A165EYK7;A0A1D0BQW3;A0A1D0BUD9;A0A1G4HPU1;A0A191TDI6;A0A1C3PHL4;A0A1K0J517;A0A1D3KYT4;A0A1D3KYI3;A0A173ADE1;A0A1D8MAM5;Q9MY26;A0A1C3PHE2;A0A1D0BZU4;A0A1C3PHD5;Q30207;A0A1C3PHD8;A0A1Z2RP35;R9RU93;A0A173ADK7;A0A1C3PHL8;Q30206;A0A173AD52;Q2A133;A0A1C3PHJ7;A0A1C3PHK4;A0A1D0C3E8;V5NQE5;F4YTF7;D5H3H6;A0A173ADH9;A0A173ADM2;A0A0M7BEQ1;O19781;F6IQI5;A0A6C0TDC8;A5HM76;A0A140T937;T2ETK5;A0A060VG26;A0A1G4HPX8;Q30191;A0A1C3PHM3;A0A1C3PHK7;A0A1C3PHM0;A0A583ZBC2;F6IQN7;F6IQI1;F6IQP1;A0A6V6XYN7;A0A2I8B359;A0A2I6Q792;A0A141MJG6;A0A2I7FSS5;A0A291HVF0;A0A2I7FSS6;A0A2I7FSS9;A0A2I7FST0;A0A2I6Q790;A0A6V6XYP4;A0A286MCF2;A0A6V6XYQ0;A0A2I7FSY0;A0A2I7FSX2;A0A2I7FSX1;A0A2I7FSV9;A0A2I6Q7B2;A0A2I7FSV7;A0A2I7FSV4;A0A2I7FSV3;A0A2I7FST4;A0A291HVI3;A0A2I6PN81;A0A286MCG5;A0A1L5LC24;A0A286RSS2;A0A286MCG4;A0A238TPE3;A0A286MCE8;A0A2I7FST7;A0A286MCE9;A0A291NGL0;A0A286MCF1;A0A286MCF3;A0A238TMI3;A0A286MCF5;A0A286MCF6;A0A286MCF0;A0A2I6PN80;A0A2I7FST6;A0A2I7FST3;A0A291NGL5;A0A223PYI5;A0A238TM21;A0A2I7FSV2;A0A2I7FSU9;A0A2I7FSS4;A0A2I6Q7C8;A0A1W1B5Y3;A0A218N9R7;A0A218N9S5;A0A2I6Q7C0;A0A2I6Q7C1;A0A2I6Q7C3;A0A2I6Q7C4;A0A2I6Q7C7;A0A077B7N4;A0A2I6Q7D4;A0A2I8B351;A0A2I6Q7E1;A0A2I6Q7E2;A0A2I6Q7C5;A0A1X9PQR1;A0A1W6C2K8;A0A2I6Q7B3;A0A2I6Q7B4;A0A2I6Q7B6;A0A2I7FSW1;A0A2I8B350;A0A2I8B349;A0A2I6Q7A5;A0A2I7FSV0;A0A2I7FSR9;A0A2I7FRK9;A0A2I6ZMX6;A0A2I6Q794;A0A140HMA1;A0A1W1B5P0;A0A1W1B5Z3;A0A2I6Q7B1;A0A2I6Q7B0;A0A2I6Q7A7;A0A2I7FSY1;A0A2I6Q7A6;A0A2I6Q7A0;A0A2I6Q799;A0A2I6Q798;A0A2I6Q797;A0A2I6Q796;A0A2I6Q795;A0A2I7FSS7;A0A2I6PN79;A0A1W1B681;A0A0I9NC61;A0A0U2X5S9;A0A0U2VW57;A0A0F7W2L2;A0A0G2R1G9;A0A291NGM1;A0A0G4PZI4;A0A0H4KBJ1;A0A0I9NAK5;A0A0U2VW74;A0A0S2IKX6;A0A0U3DQX3;A0A0S2IKY7;A0A0H3W501;A0A286MCG3;A0A291NGL6;A0A1C3PHJ5;A0A140DJC6;A0A0D6K9J7;A0A110AJQ0;A0A0U3DVR8;A0A2H4RK86;A0A140HMA0;A0A6V6XYN3;A0A142J2H0;A0A125R6G6;A0A141MJG8;A0A142BS56;A0A142DDR8;A0A286MCF4;A0A0B7M9X1;A0A2H4RK88;A0A2D1CJE8;A0A142J2H1;A0A140EDH7;A0A140HLF2;A0A142J2G8;A0A142J2B2;A0A142J2A7;A0A142J2A6;A0A142J2A5;A0A142FK43;A0A142FK33;A0A142J2G6;A0A140EDH8;A0A0U2XN52;A0A0U2YQR1;A0A2H4RK89;A0A0B7MB11;A0A2I6PN74;A0A2H4RNB2;A0A2I6PN76;A0A2I6PN98;A0A2I6Q780;A0A1G4HPX7;A0A1G4HPU3;A0A173AD82;A0A0B7M9W0;A0A223PYF2;A0A0U2ZJ13;A0A2I6PNA0;A0A223PYF0;A0A218NI16;A0A218N9S9;A0A291NGK3;A0A291NGL4;A0A2I6Q789;A0A2I6PN72;A0A223PYE1;A0A2H5CPB2;A0A2H4UK33;A0A223PYF4;A0A2H4UK14;A0A0U3BX63;A0A0U3D483;A0A0U2XA78;A0A0U3D8Q5;A0A0U2Q241;A0A1K1TAX7;A0A0U2ZUJ6;A0A286MCG2;A0A286MCG0;A0A286MCF9;A0A2I6PN88;A0A2I6PN87;A0A2I6PN85;A0A2I6PN83;A0A2H4RK95;A0A2H4RKA2;A0A2I6PN91;A0A2H4RNB1;A0A2H4RNC4;A0A1W1B672;A0A1W1B697;Q5F311;A0A1C3PHZ2;V5NQC9;V5NQE0;A0A090KFX9;A0A7T3RIQ2;A0A0B7MHY3;A0A6C0NSP3;A0A0B7MHW2;A0A0B7MH52;A0A6C0SH34;F6IQA7;A0A0B5JL51;A0A6B9V3B6;A0A3G6V3S4;A0A5C0T839;A0A410R962;A0A5J6BVL6;A0A2R4KPC2;A0A1C3PHN0;A0A0B5J5S1;A0A0B7M9U0;V5NRD7;F6IQG9;V5NQZ6;V5NQX0;A0A6H0Y7E4;V5NRD2;F6IQH3;V5NQR3;V5NQF4;A0A0A1E850;A0A0B7MB33;Q861D3;A0A090KFR2;V5NQY1;Q861C9;A0A8G1GEW0;A0A060VCZ2;F6IQH1;V5NRE8;A0A060VD11;V5NQG2;A0A090KME8;A0A650AP92;A0A090KM51;Q861C7;F6IQP3;F6IQP2;F6IQP6;F6IQA9;F6IQB0;A0A6M5WT88;V5NSZ1;F6IQG7;A0A7D5K1G8;F4YTG4;V5NSW0;F6IQN6;F6IQP4;V5NSW3;Q7YNY6;Q709M5;Q70HJ6;F6IQP5;F6IQN8;F6IQN9;F6IQN5;F6IQP0;A0A481MT93;V5NSY5;V5NSY2;Q5QR58;F6IQG8;A0A0B7MB35;A0A886NJX7;A0A411G9X4;A0A7G7XYL4;F6IQH2;A0A6C0TDD8;A0A0B7MI00;A0A3G2LWT1;V5NRF3;F6IQH0;V5NRF9;A0A2U9AEN7;V5NRG0;V5NSX8;A0A2U9AEN8;Q7YP25;Q29853;Q7YP17;V5NQZ9;A0A3G2YUZ1;A0A1Z2RPA9;A0A1W1B5E1;A0A1Z2R891;A0A1W1B5Q3;A0A1Z2R895;Q7YNX2;F6IQI4;F6IQI3;A0A1N7SXR8;A0A1Z2R894;A0A1S5UYW6;A0A1W1B5J7;A0A218MK40;A0A218MK47;A0A218MK59;A0A218MK64;A0A1Z2R896;A0A218N9R3;A0A3G4R1E9;A0A1S5UWQ2;A0A1W1B5L4;A0A218N9R8;V5NQZ0;A0A0B7MB19;A0A1W1B6A3;A0A1W1RMZ4;A0A1W1B614;A0A1W1RN18;A0A1W1RN34;A0A1W1RNN9;A0A1W1B6C0;A0A2I6R6F9;A0A0B7MB28;A0A1S5V2W1;A0A1W1B5F9;A0A1W1B5E7;A0A1W1B5E0;A0A1V0S7Q2;A0A0U5QLU5;A0A1V0S7K3;A0A1V0E5B6;A0A1S6GKZ7;A0A1S5V2W8;A0A1W1B5I2;A0A1X9PWD3;A0A1W1B5N8;Q08173;A0A2I6R6J5;A0A218N9S8;A0A2I6Q7C9;V5NQU3;V5NQU7;V5NQW5;D3VN25;V5NQX2;O19691;A0A141MJH1;A0A024F8H3;A0A125S9G7;A0A583ZBE8;V5NQX4;A0A140DJC8;A0A140EDH6;A0A2K4N818;A0A1G4HPX1;A0A1G4HPW2;A0A090KM56;A0A0F7NG46;A0A4Y1YR62;Q2LC92;A0A142L065;A0A140HM96;Q14QQ0;A0A2S0SYT1;Q95353;A0A583ZBB1;Q29934;A0A6B7KYT1;A0A0D6K953;A0A3G1GJZ1;A0A5J6CWT4;A0A2K4N840;A0A583ZBA7;A0A3G1GK56;B1GYE7;F0VRV8;F4NC24;F4YTD3;E9RJS5;F4NC34;F4NC30;E9RKB1;F4NC32;P01889;P01893;E3WH40;A0A7D9FW95;F4NC28;F4NC29;F4NC27;F4YTE8;F6IQX9;F4NC25;A0A2K8FU56;F4NC33;F4NC26;F4NC31;Q0E7X4;Q5D1X0;U5YMM3;A0A0A7TVJ0;U6BQP3;F4NBY0;F6IQY7;U6BM83;U6BQP8;A0A0K3AT85;U6BQQ1;U6BR47;A0A3S8UVI3;A0A6C0SEM2;U5YMM6;U6BR82;Q6IUU8;U6BR74;S4VG21;F4YTC9;E0YNM1;F4YTD6;F4YTD5;F4YTD4;F4YTD7;F4YTC6;F4YTD2;F4YTE1;U5YKD2;F4NC21;F4NBX2;F4NC15;F4NC16;F4NBV8;F4NC17;F4NBY8;F4NC13;F4NBY6;F4NBX4;F4NBV2;F4NBW7;F4NBR4;F4NC08;F4NC09;F4NC10;F4NBW1;F4NBX3;F4NBW4;F4NC14;F4NC12;F4NC11;F4NBV7;F4NBR6;F4NC05;F4NC03;F4NC02;F4NC01;F4NC00;F4NBZ9;F4NBZ8;F4NC04;A0A7D9FWA0;F4NBR7;F4NBR8;F4NBS0;F4NBX6;F4NBP0;F4NBQ5;F4NBV9;F4NBW6;F4NBW8;F4YTF5;F4YTE6;D2KPG8;F4YTF2;F4YTF8;F4NBW0;F4YTG0;F4YTE5;C6L830;F4NBW9;F4NBX0;F4NBW5;G9HXH5;Q2MCN7;F4NC23;F4YTF1;F6IQY4;F4NBX1;F4NBY4;F4NBY3;F4NBY2;F4NBY1;F6IQY6;U6BQQ7;U6BQR0;O19626;A0A1D3TZL4;K7DVA1;A0A1D3TZP6;A0A1D3TZL8;F4NBW3;O19782;Q29655;R4ZGR8;Q29674;R4ZGR3;A0A858LGJ0;Q29653;A0A583ZBW3;A6H567;Q95HN7;A7LB40;Q45FY3;H6SHQ4;F4NBU4;F4NBU5;Q45FY4;A0A076JYD5;R5A8Z1;R5AJZ3;A0A078N1N5;A0A4P8UKL8;U6BN32;F6IQ84;W8YM35;A0A1D3TZM2;A0A583ZBA0;R4ZGR1;A0A1W2PR11;A0A7D9FW58;A0A5H2X423;A0A1T4J2S9;B2G3M3;A8YQE7;A0A678ZW60;A0A6G6ZQM2;Q9MY41;G9DBH0;A6H580;Q95IB6;A0A7I8AUN4;Q29654;A0A0N7M1B0;G9FTK3;A0A6M8DIL0;G9FTK4;A8YQF0;G9DBH1;B9WPQ8;Q860B6;R4ZGR5;A5PHT2;A7LB39;A0A6C0TEL6;Q45FY5;Q6IVY5;I6YW07;Q861E8;Q29657;F2XI58;A0A1W2PP29;A0A4Y5P8P3;I7LRB1;Q29656;G3FIP8;I2GAD9;F4NBU3;A0A060VHG3;U6BQR3;U6BN69;A0A0K2CX04;U6BN95;U6BQP5;U6BR51;U6BN64;A0A6H2U458;U6BN67;A0A1D3TZN3;U6BN63;A0A482PI45;U6BN72;Q68J68;A0A059UE51;S5ZR34;A0A060D4B3;U6BMA7;U6BMA2;U6BQN8;U6BN77;A0A6H1PRN2;A0A0K3AW26;U5YJM7;A0A0K2CWY6;F6IR33;F6IR25;U6BM79;U6BN85;U6BQP1;U5YKD6;U6BM93;A0A7D9FW65;U6BR57;U6BN81;A0A7D8ZZL2;U6BR60;U5YJN1;U6BR65;A0A6C0SGM6;A0A1J0KHA6;U6BN92;U6BN61;A0A060DAG7;Q5ZGX1;U6BQQ4;A0A060D9N8;U6BN99;R5AJY6;A0A060D4A6;A0A060D0Q1;A0A060DAH3;A0A5J6BW28;U6BN60;U6BM88;A0A515I5M8;U6BN49;A0A482PCI4;A0A0S2C2H6;S6B303;A0A060D4S6;R5A8T8;U6BN89;R5A8X2;U6BM98;F4NC20;U6BN55;A0A0H4KBH8;U6BMB1;A0A165DE51;F6IQX8;U6BR87;A0A6C0M5D3;U6BR90;U6BN44;U6BMB8;Q5ZGX0;U6BN38;U6BN29;U6BMC2;U6BN41;F4NBU2;F4NC06;A0A141MJG7;A0A7D3UM76;A0A1C3PHJ3;A0A6V6XYU4;A0A7D8ZIQ5;A0A6V6XYW6;A0A7D8VHG5;A0A7D8ZGQ7;A0A7D8Z6D1;A0A7D3QW60;A0A6V6XYF2;A0A7D3QHH9;A0A6V6XYZ0;A0A7D8V8H4;A0A7D8VHJ5;A0A7D8VS39;A0A7D8V8J0;A0A7D8V8K3;A0A6V6XYE9;A0A7D8ZBF3;A0A1C3PHF5;A0A1C3PHF6;A0A6V6XZB9;A0A7D8ZBB7;A0A7D8ZBD1;A0A1C3PHG2;A0A6V6XYF5;A0A6V6XYM6;A0A6V6XYL8;F6IR18;A0A6V6XYF3;A0A6V6XYH0;A0A2I8B356;A0A1C3PHF8;A0A6V6XYV0;A0A6V6XYG6;A0A6V6XYG1;A0A1C3PHH3;F4NBT0;F4NBX8;F4NBT4;A0A7D3UMD9;A0A1C3PHH4;A0A7D8ZN44;A0A7D8ZN18;A0A6V6XZ08;F4NBV5;A0A6V6XZ16;F4NBP2;A0A7D8V8L2;F4NBU0;A0A6V6XZ39;A0A6V6XYD4;A0A6V6XZA6;A0A6V6XZD2;A0A6V6XZE0;A0A7D9BUZ6;F4NBP8;A0A7D5Q2Q8;F4NBP6;A0A7D5U6L7;A0A6V6XYZ8;A0A7D8V9M2;A0A7G1KWN1;A0A6V6XYY1;A0A6V6XZF5;A0A6V6XYC8;A0A6V6XYD2;A0A7D8ZGQ2;A0A7D8ZGR8;A0A7D9FZ53;A0A1C3PHF1;A0A7D8V7S2;A0A7D8V7P9;A0A7D8V7J5;A0A7D7L8G3;A0A6V6XYD6;A0A6V6XYD7;F4NBT9;A0A7D8ZN58;A0A7D8VG50;A0A7D8VG85;A0A7D8VS70;A0A7D8VGB3;F4NBT2;A0A7D8VGD0;F4NBR3;A0A7D9FZ40;A0A7D8VER0;A0A1C3PHE1;A0A7D9BUM6;A0A7D8VAH3;A0A7D8VDW9;A0A7D8VDT3;A0A7D8VDS6;A0A7D8VDM9;A0A7D8VG38;F4NBR5;A0A1C3PHE9;A0A7D8VAG5;F4NC22;F4NBP3;F4NBS2;F4NBP4;F4NBS1;F4NBR9;F4NBY5;F4NBY7;A0A7D8VS45;A0A7D8VG53;A0A7D8VEI3;A0A7D8VEK9;A0A7D8VEP1;F4NBV1;F4NBP7;A0A7D8VAQ7;A0A1C3PHI8;A0A7D8VAM2;A0A1D0BST9;A0A7D8Z6C3;A0A7D8VS60;A0A2I8B360;A0A6V6XYY8;A0A7D8Z6B3;A0A7D8Z698;A0A076V2Z0;A0A7D8V9X3;A0A7D8VAI1;A0A7D8ZBC1;A0A1C3PHE7;A0A7D8V9M9;A0A1C3PHE8;A0A1C3PHG5;A0A6V6XYC1;A0A6V6XYD9;A0A7D8ZAI0;A0A7D8ZB93;A0A7D8Z694;A0A7D9BUK8;A0A7D8ZGS8;A0A7D8ZHU6;A0A7D8ZHX1;A0A7D8ZI19;A0A7D8ZIK3;A0A7D8ZIL6;A0A7D8VHD1;A0A7D8ZIP3;A0A7D8VS88;A0A7D8V9R5;A0A1C3PHF7;A0A7D8ZGS3;A0A1C3PHG1;A0A1C3PHE5;A0A1C3PHG4;F4NBU9;A0A6V6XZ27;F4NBT7;A0A7H1MG69;A0A7D9BUJ1;F4NC07;A0A7D9FZ47;A0A7D9FX24;A0A7D9BUX4;A0A7D9FW82;A0A7D9BUK1;F4NBR2;A0A7D9BUK3;A0A7D9BV06;F4NBQ2;F4NBR1;F4NBR0;F4NBQ9;A0A7G1K7K4;B7XH58;A0A7D9BUH4;A0A7D9FWT9;A0A7D9FWM7;A0A7D9FWF5;A0A7D9BUK0;A0A7D9BUG4;A0A7D9BUG6;A0A7D9BUH5;A0A7D9BUI7;F4NBS3;A0A7D9BUH6;A0A7D9BUH7;F4NBT6;A0A1C3PHH6;A0A7D9BUI3;F4NBQ3;F4NBQ4;F4NC18;A0A1C3PHH9;F4NBY9;A0A7G1K9L7;F4NBZ0;F4NBZ1;F4NBZ2;F4NBZ3;Q8WLR8;U6BR70;A0A8F2EVX5;A0A8E7F001;F4NBZ4;A0A1C3PHJ4;A0A7D9BVP8;F4NBS7;F4NBV6;F4NBS4;F4NBS5;F4NBS6;F4NBQ8;F4NBQ7;F4NBS8;F4NBV4;F6IQY3;F4NBV3;F4NBS9;A0A7G1KAN8;A0A7G1K7D9;A0A7D9FWZ5;A0A7L4X7J8;A0A7L4X6S1;A0A7L4X8R1;F4NBP9;A0A7D9FYQ9;A0A7D9FYT0;A0A7D9FX16;F4NBU8;A0A7L7TQN3;A0A7D9FZ88;A0A7D8ZZG7;A0A7L7TUM2;A0A7L7TUD1;A0A7L7TRR1;A0A7L7TMM4;A0A7D9FYT6;A0A7L7TME7;A0A7D9BUI6;A0A7L7TMA5;A0A7D9FXD2;A0A7L7TMB7;A0A7D9BUY4;A0A0U2NUY6;A0A7D9FXW2;A0A7D9FYQ0;A0A7D9FYP3;A0A7D9FY00;A0A7D9FXG8;F4NBT5;A0A7D9FXY3;A0A7D9FXX5;A0A7D9FXV8;A0A7D9FYR7;F4NBT3;A0A7D9FXK7;A0A7D9FXH0;A0A7L7TMC7;A0A7D9FXF3;F4NBP5;A0A0S2IIS6;F4NBT1;A0A7L4X7C0;A0A7L4X7E6;A0A7D9BUJ2;A0A7L4X757;A0A7D9FXF9;A0A1C3PHE4;F4NBV0;A0A7L4X724;F4NBQ1;A0A7L4X6W6;A0A7L4X6W3;A0A2I7FSU0;A0A173AD63;A0A7L4X6V0;A0A7L4X6U7;A0A7D9AMX6;A0A7L4X6S8;A0A7L4X739;F4NBQ0;A0A7D9FY31;A0A7G1L276;A0A7D9BUJ9;A0A7D9BUJ5;A0A7D9BUJ7;A0A0H4LXB5;A0A0H4LVJ1;A0A0H4LX89;A0A0H4LVG8;A0A0H4LTV2;A0A0H4LTV9;A0A0H4LTX5;A0A0H4LVK0;A0A0H4LVK4;A0A0H4LX80;A0A0H4LX93;A0A0H4LVJ5;A0A0H4LU02;A0A0H4LVH3;A0A0H4LU14;A0A0H4LVL4;A0A140T939;A0A0H4LVH8;A0A0H4LVN1;A0A0H4LX60;A0A0H4LX13;A0A0H4LTZ9;A0A0H4LTT9;A0A6C1HXD2;A0A0H4LX84;A0A0H4LVI3;A0A0H4LTU3;A0A0H4LTZ3;A0A0H4LTU8;A0A0H4LTY8;A0A140T9C2;A0A0H4LTW4;A0A0H4LX96;A0A0H4LVI8;A0A0H4LTY3;A0A0H4LX68;A0A6C1HY41;A0A0H4LU07;A0A0H4LU94;A0A0H4LVD3;A0A0H4LVF7;A0A0H4LU40;A0A0H4LU38;A0A140T9U0;A0A0H4LU34;A0A0H4LXA3;A0A0H4LVD7;Q9GJF2;A0A6M4RYX4;A0A858B9G2;A0A0H4LU49;A0A0H4LU54;A0A0H4LXA6;A0A0H4LTW7;A0A0H4LVC2;A0A6S7XSQ4;A0A0H4LVB9;A0A0H4LUC7;A0A6S7XU48;A0A0H4LUB8;A0A0H4LUA4;G3CC15;A0A140T9M0;A0A6B7IGT1;O78131;Q96QL3;Q5W1M0;A0A383S4B9;Q7YNY3;O78132;A0A212MHS7;M9TK49;A0A7D4WYL3;A0A140T9B7;A0A2Z6DSF7;Q9MYI0;B4DQ99;B4DYG3;A0A0H4LVC6;A0A6H2U4B7;A0A0H4LU66;B4DL31;A0A0H4LU18;A0A0H4LVE3;Q95HN1;A0A0H4LVC9;A0A0H4LUB4;A0A0H4LUA0;A0A0H4LU10;A0A0H4LU20;A0A192ZH34;B7Z760;A0A0H4LVQ3;Q29645;A0A0H4LVR3;A0A2Z4LG78;A0A0H4LVS3;A0A0H4LVS7;A0A0H4LVT1;O78134;A0A0H4LVT5;A0A0H4LU30;A0A140T9X6;A0A0H4LWY7;A0A0H4LVP5;A0A375B7I6;A0A0H4LWZ2;A0A0H4LWZ5;A0A0H4LX73;A0A0H4LX00;A0A0H4LX10;A0A0H4M9W0;A0A6F8Z9Q8;A0A0H4LVP8;A0A0H4LVN6;A0A0H4LVU0;A0A0H4LX16;A0A0H4LX25;A0A0H4LU72;A0A0H4LX21;A0A0H4LX55;A0A6F8Z9T1;A0A0H4LU89;A0A1W2PNZ7;O78133;A0A858B9C2;Q31611;A0A0H4LVG1;A0A0H4LVM3;A0A6G7NU24;A0A6C2E466;A0A6G9W191;A0A0H4LVG5;A0A0H4LX05;A0A6H0C886;A0A0H4LX64;A0A0H4LU78;A0A0H4LU84;A0A0H4LX50;A0A0H4LX45;A0A0H4LX41;A0A0H4LX39;A0A0H4LX34;A0A0H4LX29;A0A0G2JNX1;A0A0H4LU60;A0A3S6RFX1;A0A6C1HX66;A0A0S4T4K9;A0A0U5PZC9;A0A090KKG3;A0A0S4T3R3;A0A0U5PZ99;A0A0U5PXS3;A0A061DEZ3;A0A140HM92;A0A0S4T3H2;A0A0U5KKA9;A0A090KF68;A0A0S4T3S1;A0A090KFS8;A0A0S4T3S8;A0A1C3PHX6;A0A090KKF1;A0A0U5PUA3;A0A1B1SMT0;A0A0U5Q0C0;A0A1W1RNP9;A0A1C3PHY6;A0A0S4T1J9;A0A0S4T1F6;A0A0S4T1D0;A0A0S2IKY2;A0A1C3PHX3;A0A1C3PHW8;A0A0H3W101;A0A1W1B5M2;A0A1W1B5Q6;A0A1W1B607;A0A1W1B6G6;A0A0S4T425;A0A191XZD1;A0A1W1B5J0;A0A2L1DGK7;A0A2L1DGI2;A0A2L1DGJ2;A0A2L1DGJ3;A0A2L1DGJ5;A0A090KM72;A0A2L1DGJ6;A0A2L1DGL8;A0A173AD16;A0A2P0W8H1;A0A2X0RD32;A0A212MH00;A0A1Z2RTR7;A0A2L1DGK4;A0A2L0V4J5;A0A2L1DGG7;A0A2L1DGG3;A0A142JA41;A0A090MF14;A0A1C3PHW6;A0A1C3PHV4;A0A1C3PHT9;A0A1C3PHS2;A0A0S4T1U2;A0A0S4T2J8;A0A090KKK9;A0A1C3PHQ9;A0A090KM94;A0A0S4T2W5;A0A0S4T386;A0A181C503;A0A181C4Z6;A0A1W1RN04;A0A1W1B5J1;A0A5A4M3R3;A0A4P2SS60;A0A4Y6JM24;A0A4Y7LJF4;A0A5A4M3V0;A0A5A4LJZ5;A0A4P2SST2;A0A5A4LVD0;A0A1V0E5B5;A0A5A4LV36;A0A5A4LL70;A0A4P2STR9;A0A583ZBX2;A0A6B7IIN5;A0A4P2SS74;A0A4P2SSC1;A0A5A4LJL4;A0A5A4LJ71;A0A4P2SSQ7;A0A1Z1XFJ7;A0A4P2SUA2;A0A4P2SUF0;A0A4P2SUH9;A0A4V0NP92;A0A4P2STB0;A0A4P2SSW4;A0A4Y5R1J9;A0A4Y5UXW1;A0A678ZR35;A0A0S4T1T7;A0A1W1RNF8;A0A5A4LJ27;A0A1D8MAN5;A0A1D3KYN0;A0A1D0C3F9;A0A1D0BZT9;A0A1C3PI67;A0A1Z2RTM9;A0A1C3PHY9;A0A0S4T1S6;A0A0S4T1N0;A0A060VD06;A0A1Z2RTS6;A0A0A8LC14;A0A2L0V4I9;A0A1W1TBM0;A0A1D8MAP0;A0A060VG58;A0A1C4GZ60;A0A5A4LJ45;A0A1G4HPV8;A0A1S7SLG0;A0A5A4LJ00;A0A5A4LHY7;A0A583ZC41;A0A583ZC13;A0A2X0REV6;A0A1L5LC14;A0A2X0REH7;A0A0S4T1L9;A0A0S4T1P4;A0A0S4T1R4;A0A2L0V4I8;A0A2X0RD31;A0A5H2UFP4;A0A2K4XGQ7;A0A858LGE1;A0A678ZRA3;A0A858LGM0;A0A2K4XGP8;A0A2K4XGP5;A0A2K4XGM5;A0A2K4X4H3;A0A2K4XGM1;A0A2K4X4K0;A0A0H4LTV6;A0A291ID98;A0A858LHJ7;A0A858LHI2;A0A858LHJ1;A0A858LKA6;A0A858LJJ3;A0A858LHK9;A0A858LGM4;A0A2K4X4J0;A0A2L0V4I1;A0A2P9G7T9;A0A2P9G7T4;A0A2P9G7S4;A0A2P9G7N6;A0A2P9G7K9;A0A2P9G7K4;A0A2P9G7V4;A0A2H4RN71;A0A2K4XH10;A0A2K4XGU4;A0A2K4X4F6;A0A2K4X4C3;A0A2K4N854;A0A2L0V4I4;A0A2R4FYN5;A0A2P1CR03;A0A2R4KPD2;A0A2R4QL69;A0A2R4QL99;A0A2S0SYS4;A0A2S1B6Q0;A0A2S1FMR8;A0A678ZR39;A0A2R4KPA8;A0A212PCI6;A0A2P1CQZ3;A0A2P0W8G4;A0A2H4RND0;A0A2D1CHE9;A0A858LHH2;A0A140T9W7;A0A2K4XGT2;A0A2K4XGR2;A0A0H4LU25;A0A649ZUK0;A0A678ZR14;A0A2K4X4H9;A0A223LN56;A0A140T9D9;A0A2K4X4I0;A0A2K4X4I5;A0A2K4XGT4;A0A291HVB3;A0A858LH64;A0A238TM03;A0A223PY95;A0A223PY77;A0A223PY76;A0A223PY71;A0A0B7NXU6;A0A0B7NY78;A0A218MK81;A0A2K4X4G1;A0A2K4X4G5;A0A2K4X4G6;A0A2K4XGP0;A0A2K4XGT9;A0A5C0ZX79;A0A5H2UFR2;A0A3S6RG78;A0A6B9VRD9;A0A6B9VRC7;A0A6B9VRD6;A0A3S6RI87;A0A3S6RGD4;A0A6B9MYK6;A0A3S6RG99;A0A6B9VTU6;A0A3S6RG50;A0A6B9VU41;A0A6B9VU46;A0A3S6RG74;A0A6B7IKK4;A0A6B9VUK0;A0A858LG55;A0A3S6RIN5;A0A6B9VRB7;A0A6B9VR26;A0A6B7IKH6;A0A6B9HR45;A0A6B9HQU1;A0A678ZXS3;A0A679A115;A0A679A1S7;A0A679A1X4;A0A6B7FU19;A0A6B7FU69;A0A6B9HR36;A0A6B7FUT8;A0A6B7FW35;A0A6B7IGL4;A0A6B7IGM3;A0A3S6RG67;A0A3S6RG34;A0A6B7KQC9;A0A6B7IJI8;A0A6B7IHT4;A0A4P2SRF1;A0A6B7IHU8;A0A6B7IJS9;A0A6B7IK99;A0A6B7IJD5;A0A386IRN1;A0A3S6RG28;A0A6B7IJL1;A0A6B7IIB7;A0A6B9MYN1;A0A3S6RIQ0;A0A858LG74;A0A4D6NWH5;A0A4D6NWC9;A0A6B7IHS8;A0A6B7IHR9;A0A6B7IHK3;A0A6B7IHI4;A0A493QP76;A0A481Y986;A0A455JW43;A0A455JVW6;A0A6B7IGU1;A0A6B7IK36;A0A5H2UZK3;A0A3S6RFW0;A0A3S6RG04;A0A6B9VT73;A0A6B7IGN6;A0A678ZXQ2;A0A4P2SRV8;A0A7L4X7K5;A0A858LG44;A0A858LFA2;A0A6C0SDQ4;A0A7R8NDR8;A0A7S5GRJ8;A0A7R8C2A0;A0A7L4X706;A0A7S5GRM2;A0A7D4YBD0;A0A7S9ATT8;A0A7R8C2D0;A0A7R8C4G5;A0A7T5V792;A0A7S5L7B4;A0A7S5L7S9;A0A6S7YNX5;A0A7R8C2C1;A0A7R8GUD3;A0A7R8GUE3;A0A7R8GUF2;A0A7R8GUG9;A0A7T8GE73;A0A7R8GUB2;A0A7R8GUJ7;A0A7U3W2B4;A0A678ZXG6;A0A6C1HXE4;A0A447EB29;A0A858B9G9;A0A6C0SGQ4;A0A6C1HWC5;A0A7S5L7B1;A0A7T5BP65;A0A7R8C2B5;A0A6B7HGB4;A0A6B7HHQ8;A0A6B7HHT8;A0A6B7IGJ1;A0A6B7HGD6;A0A6B7HGB8;A0A7R8C2L3;A0A6B7FW43;A0A678ZWD4;A0A678ZWN5;A0A678ZWP0;A0A6B7FX17;A0A6B7FWT5;A0A858B9R0;A0A6B7HG12;A0A6B7FX49;A0A6B9VU60;A0A6B7HFZ6;A0A6B7HFZ0;A0A6B7HFK6;A0A6B9VRH0;A0A7R8C2D5;A0A6B7FX30;A0A6S7XV36;A0A7R8C2J4;A0A7R8C2H3;A0A7R8C2D7;A0A6B7HGL3;A0A858B790;A0A858B7C7;A0A858LNF2;A0A6B7IGP4;A0A4Y5ULF0;A0A383S297;A0A383S262;A0A383S2J9;A0A383S2E6;A0A383S3V1;A0A383S3N9;A0A383S2A3;A0A383S273;A0A5H2UFU5;A0A4P2SRI3;A0A4P2SRW3;A0A2X0RER3;A0A5H2UZA0;A0A5H2UW10;A0A5H2UVZ0;A0A383S2K8;A0A383S314;A0A383S379;A0A383S2D6;A0A858LH24;A0A383S3W9;A0A3S4BE58;A0A858LGQ4;A0A383S2L7;A0A383S236;A0A383S223;A0A5H2UJ62;A0A5H2UG10;A0A383S220;A0A678ZQU4;A0A678ZIC1;A0A678ZIE3;A0A5H2UVB4;A0A678ZII6;A0A678ZQJ1;A0A678ZQL6;A0A678ZQW3;A0A5H2UG17;A0A678ZQY3;A0A5H2UZJ1;A0A649ZU62;A0A5H2V2I3;A0A5H2V2A7;A0A4Y5UM67;A0A678ZHV9;A0A140T9W3;A0A649ZUW2;A0A4P2SRX9;A0A5H2UZH1;A0A5H2UW22;A0A5H2UUG4;A0A5H2UUE6;A0A0B7NX36;A0A5H2UJJ7;A0A5H2UJJ1;A0A5H2UJH9;A0A678ZJX3;A0A5H2UJB6;A0A5H2UIZ7;A0A5H2UIS0;A0A5H2UIL5;A0A2X0RQ94;A0A3S6RIP5;A0A383S417;A0A6F8Z8Y2;A0A385NIB1;A0A3S8XFV4;A0A447G109;A0A411CX29;A0A411J057;A0A455JSA0;A0A383S3X1;A0A383S218;A0A383S203;A0A383S1W2;A0A3P3ZKQ3;A0A3S4CLK6;A0A455JTV1;A0A455JTY2;A0A455JTY6;A0A678ZXR2;O19682;A0A858LNK3;A0A858LNI2;A0A3G2JP23;A0A3S6RIE5;A0A2X0T4J8;A0A375B7F1;A0A383S2E4;A0A2X0RQC6;A0A2Z5QAA1;A0A2Z4C3S4;A0A8G1GEX8;A0A8G1LT08;A0A2X0RWU1;A0A0B7NX42;A0A2Z6DSG3;A0A3S6RG88;A0A6F8Z9P7;A0A8E4NGL3;A0A8E4NGK2;A0A8E4NFH8;A0A8E4J4T8;A0A896SZ50;A0A0H4M9V5;W0G8G7;A0A0H4LTX1;E0Z0E3;A0A3Q8TKD6;A6H582;A0A1C9LUP5;A0A7T3RIV4;A0A060VCX9;I1XV05;I7II55;A0A7T3RIV0;L7SQ42;S5ZCB0;Q6DU08;Q6A3P4;A0A5Q2WTV3;A0A890BW50;A0A890BW29;A0A0D6E1E4;A0A0G2JH66;Q6UV35;A0A120N646;U6BQR7;A6YS06;Q2L6I5;A0A120N610;F4YTD9;D9UB02;A0A1V0E3X1;P17693-2;P17693;P17693-6;P13747;Q6DU14;A0A1Z2RP44;A0A1V0E3U3;A0A3G2C0L7;A0A0G2JPA3;D0EV57;A0A1V0E3V1;A0A1V0E3T9;A0A1V0E3U0;A0A1V0E3W8;A0A1V0E3X2;Q8HWE9;Q6DU28;F6IQF3;Q29939;F6IQF2;F6IQF1;V5NSZ5;V5NQV7;V5NST1;V5NSV6;V5NRC4;V5NSV1;A0A7D4WY46;V5NQT0;Q6DU20;A8YQF4;A0A5C1D5P3;A0A120N602;D7RVC0;Q9MYA2;E5DHS1;A0A6M3VZ10;A0A0H4K8W1;Q30182;Q8WLS1;F6IQE7;A0A060VD24;Q707T7;Q707T8;Q5RJ85;A0A0P1GLR6;Q8MGQ7;Q8MH47;Q8MH48;D0F1S2;A0A1V0E3U1;A0A1V0E3V5;A0A1V0E3W4;A0A060VCY2;A0A0G2JPQ3;R4S834;F6IQQ2;N1NT57;A0A1L2BLQ5;A0A1C3L6D2;A0A1C3L6K3;A0A1C9ZUH0;A0A0U5LWB3;A0A167RMU3;A0A110AZI3;A0A0Y0UX29;F6IQR4;A0A060S0X7;O02926;A0A097NUP5;A0A0F7RNH7;A0A0G3EHL4;A0A0G3EK94;A0A0H5CWJ1;A0A1V0EFI6;A0A0N9R1V5;A0A0S2VHB8;A0A060GU72;A0A6M3VZI4;N1NSZ1;O02925;H9BB17;R4S7Z5;R4S4F9;R4RWV3;D9UC14;H9B8Z2;I7H475;I2GUK6;I6ZY88;I7D913;M5A8K4;I7HBP5;O02924;I7LL27;J7H084;J7QCI8;J7RPN4;M1T1C2;I7GYF9;M5EF61;H9BSP5;N1NV69;O02923;A0A6M3VZ79;A0A1V0EFH5;Q9UM45;A0A3G3C0Z1;A0A3G2WH74;Q29958;D7GM41;S5DLC4;A0A3G2LZB3;A0A0N9QHV8;B3KUD8;Q861E9;D7GM38;B4DQ91;G9AYK7;Q861F0;A0A140T8X0;A0A140T9V0;J3JRT1;B4DT81;A0A0U3CJ72;Q9TPU9;M1XJE8;B4DVK7;O78164;O19653;A0A1S7SKM7;H9C681;I3RW89;A0A0P1IVY9;A0A0S2IIY9;A0A173DR01;L0GE50;F2QL94;A0A0P1IVW8;A5PHP9;A5HSK0;A5PHP8;D9UAZ5;A0A0B6VWV2;V5NQA7;V5NQF8;V5NQW6;Q59EE1;A0A7L7TM74;Q30171;A0A4E9E4P1;A8K8M6;S5RFZ0;Q6DU50;A0A4Y5T945;A0A4E9DQ67;A0A4E9D3W4;A0A223PYF5;A0A2K4X4C8;A0A3S6RFL8;A0A218N9T4;A0A3S9GVK4;A0A5A4LM15;A0A5H2UTP4;A0A678ZH34;A0A678ZVT3;A0A4P2SR28;A0A678ZVY0;A0A4E9E9K8;A0A0F7WBW2;A0A678ZWV9;F6IQG3;A0A8F2EV62;A0A7U3UJE3;F6IQQ4;F6IQR2;F6IQQ5;F6IQQ3;F6IQQ1;F6IQQ0;F6IQP8;A0A3G2YV06;F6IQG2;A0A5C0C6I5;F6IQG1;Q6ZUW0;A0A2U9AEN5;F6IQG4;F6IQG5;A0A8G1LRN1;F6IQG6;A0A3G2YUZ9;F6IQF4;A0A5J6VAR0;A0A6B7FV69;V5NQC2;A0A6B7IGK0;A0A6G7S6R4;A0A6M6C8C3;A0A7L4X7K6;A0A6B7HFI1;Q38PK6;A0A8E4J417;A0A6B7IF38;A0A678ZX58;A0A858LFS2;Q54A71;F6IQJ6;F6IQP9;A0A8E6ZAC8;F6IQC6;F6IQG0;A0A3G6II08;F6IQC1;F6IQC2;A0A6B9Y1D4;F6IQC3;A0A6M8DY44;V5NSU6;F6IQC4;F6IQC5;V5NQS5;V5NR05;V5NQT5;F6IQF0;F6IQC8;F6IQB4;F6IQB2;F6IQF8;F6IQB1;F6IQA8;F6IQC9;F6IQB6;V5NQB9;V5NR10;A0A8G1LR19;A0A3Q8Q6A3;V5NQV4;V5NQB5;V5NQB2;V5NQA4;V5NQW2;V5NQW9;V5NQU9;V5NQR7;A0A6B9XPK7;A0A3G6INB2;A0A3Q9BIB8;V5NSU4;V5NRC9;V5NRA1;V5NRA5;V5NRA9;V5NRB3;V5NQX8;V5NRB9;V5NST4;F6IQC7;V5NST9;F6IQD0;F6IQE4;F6IQD8;A0A6B9QH15;V5NQC6;A0A5C0NTE8;A0A5J6V0W7;A0A890UPS4;A0A4V1DXB7;A0A4P8VTI7;A0A4Y5RU83;A0A7T3RIS4;A0A4Y5RVP2;A0A4Y5RX13;A0A5J6V987;F6IQD7;A0A3G2BA53;A0A2U9AEP4;F6IQD2;A0A140T9W2;A0A7T8G0C6;F6IQF9;A0A2U9AEN3;A0A4P8DJP2;A0A8G1GF35;A0A7G7XYL5;F6IQC0;A0A3G2YV77;A0A3G4YSB6;F6IQD5;F6IQD6;F6IQB5;F6IQB7;V5NQT8;F6IQD1;F6IQE9;F6IQE8;F6IQE6;F6IQF6;F6IQE5;F6IQE2;F6IQE1;F6IQB8;F6IQE0;F6IQD9;F6IQF5;F6IQF7;F6IQB9;F6IQB3;A0A410P851;F6IQD4;R4S809;R9RH52;A0A0H4M9W9;D9UB03;Q29954;I4IY68;A0A0S4T3Z3;A0A0H4LXB0;A0A0H4M9Y0;W0USZ9;Q29988;I3ZN87;Q5D1W8;D3K0R0;A0A0H4LYW5;X5M224;Q9MY34;V6A6X0;V6A6X3;V6A703;T2FEC7;X5MPH5;Q7YQB3;C7FFM0;C7EXL7;Q53YP1;C1K0Y4;B8YBG3;C5MQZ9;D7GN69;C1KGA3;Q5D1W7;C5IYE4;C5IYE2;Q2L6G3;Q53YN9;A0A0H4LYZ8;A0A2K9VPU1;A0A5C0E2Y1;A0A6F8VJ76;A0A2K9VPV4;A0A2K9VPV3;A0A2K9VPV2;A0A2K9VPU8;A0A2K9VPU7;A0A2K9VPU3;A0A2K9VPW0;A0A286R617;A0A2K4XGQ3;A0A2K9VPV6;A0A1X9ZE52;A0A2K9VPW9;A0A2R3U9Y9;A0A583ZC33;A0A8F4GAC3;A0A3G3NG95;A5PHT5;U4KJ84;D6CJC0;C7U1K3;C3VMX5;A0A1D0A082;I2GAE1;F6IQE3;H9TV73;E1CJE7;B9WPQ7;A0A0H4LXC4;A0A0H4LVE0;S5DHJ3;A0A0H4LZ82;A0A0H4MA11;A0A0S1LGG8;A0A0H4MAB7;A0A0B7NNK7;A0A0H4MAB3;A0A0H4MAA7;A0A0H4M9Z1;A0A0H4M9U7;A0A0H4MA98;A0A0H4MA90;A0A0H4MA15;A0A0H4MA87;A0A0H4MA20;A0A0H4MA26;A0A0H4MA32;A0A0H4MA37;A0A0H4MA94;A0A0H4MA45;A0A0H4MA62;A0A0H4MA67;A0A0H4MA72;A0A0H4MA78;A0A0H4MA03;A0A0H4MAA2;A0A0H4LZ73;A0A0H4M9W5;A0A0H4M9Y6;A0A0H4M9Y3;A0A0H4M9Y2;A0A0H4M9Y1;A0A0H4M9X9;A0A0H4M9X8;A0A0H4LVL9;A0A0H4M9X7;A0A0H4M9X6;A0A0H4M9X4;A0A0H4LZ77;A0A0H4LZ87;A0A0H4LU44;A0A0H4M9V1;A0A0H4MA56;A0A0H4M9Z9;A0A0H4M9U3;A0A0H4LZA3;A0A0H4LZ98;F4MKW1;A0A0H4LZ94;A0A0H4LZ89;A0A0H4MA83;A0A0H4LYX8;A0A0H4LZ21;A0A0H4LZ47;A0A0H4LZ30;A0A0H4LYY6;A0A0B7NS27;A0A0B7NS15;A0A0B7NS10;A0A0H4LZ60;A0A0B7NRZ9;A0A0H4LXD4;A0A0H4LZ55;A0A0H4LZ50;A0A0H4LZ43;A0A0H4LYT7;A0A0H4LZ38;A0A0H4LVF3;A0A0H4LVE7;A0A0H4LZ25;A0A0H4LYZ3;A0A0H4LZ02;A0A0H4LZ05;A0A0H4LZ10;A0A0H4LZ18;A0A0H4LYZ0;A0A0H4LYY2;A0A0H4LYW9;A0A0H4LXD9;A0A0H4LXF7;A0A0H4LYV8;A0A0A8LDV2;A0A0H4LYV4;A0A0H4LYU9;A0A0H4LYU5;A0A0H4LZ68;A0A0H4LYT4;A0A0H4LYU0;A0A0H4LXG5;A0A0H4LXG1;A0A0H4LXF2;A0A0B7NX20;A0A0H4LXE3;A0A0H4LZ34;A0A0B7NNL6;A0A0H4LYW1;A0A0B7NRX9;A0A0H4LZ65;A0A0H4LXD0;A0A0B7NS36;A0A0H4LXC0;A0A0B7NX27;B2G4X1;A7MAP6;A7MAP5;F2XI52;F2XI60;E3Q0Y0;E3Q0Y1;E3Q1I4;E3Q1I8;E3UPB1;F2XI55;E9RK92;E9RKB0;F1CK31;F2XI53;G1UK12;F2XI54;E7ECA9;F2XI61;F2XI62;E1XUP5;G9MCL1;G9I1P5;G9G816;G8GJC2;G8GJC1;E9ABI5;S5DHK4;G3CCB6;S5DMZ8;E1CJE0;S5DHN5;S5DHJ9;G1UK11;A0A510I2F4;Q5R1M2;G9MCL3;G9MD18;G9MD20;O02929;O19659;Q5R1M3;Q95356;Q95347;Q8MHM6;Q6F3D7;R9RIA9;E0WN24;Q5GML2;Q4U0W2;Q9BCT7;R4RUH6;G9MDC7;G9MD22;O02927;G9MD21;O02928;O19658;E1CJD8;D8MIV9;G0WJF0;C0JSV2;F5A503;F5A502;F4ZZU9;E1CJE1;E1CJD9;C0JT29;B5LFY0;B5LFY1;B5LFY2;B6VPZ5;C0JSV3;D7GMU9;H3K397;C0JT30;C0JTC7;C5J3U3;C0JT28;C7EW72;B5LFX8;E0WMT7;D5L7X0;D6QTC5;S5DU29;U6C058;A0A2Z5XAD6;A0A2R3U9X1;A0A481SW80;A0A4Y1YSS6;A0A3G2LML8;A0A3Q9WY52;U3Q010;U3MU75;U3MKX3;W8NQA2;U6C2M6;A0A2Z6IDA3;V5LE67;X5MFD1;S5DHK9;X4Z1S5;V9Q5Q1;V6CKW5;V6CKT7;S6BXF8;A0A2Z6IH57;A0A2Z6ICX0;A0A7D4XP50;A0A4P8D7G4;A0A1X6WJ73;A0A583ZC10;A0A866W3F9;A0A7T5V7A5;A6YB83;A7MAK3;A0A7L7TMS9;A0A2S1IZU1;A0A7D5B8V1;A0A2S1IZV6;A0A2Z6ICS3;B1P198;A0A3Q9NGA6;A0A2Z5XAD9;A0A2Z5XAF7;A0A2Z5XAF8;A0A2Z5XAF9;A0A2Z5XAH7;A0A2Z5ZN05;A0A2Z5ZMF2;T2DLL9;S5DHZ7;S5DTQ7;S6AVS1;S6B8N5;S5S0F8;S5DTG6;S5DTF8;S5DTF3;S5DTE6;S5DHT3;S5DHW6;S5DHX2;S5DHX8;S5DHY3;T2AUC3;S5DI10;S5DN08;S5DL95;S5DL99;S5DLA8;S5DLI6;S5DMY4;S5DMZ0;S5DI50;S5DL90;S5DN29;S5DN45;S5DNA0;S5DNB1;P17693-5 HLA-A;HLA-A24AK;HLA;HLA-B;HLA-ABC;HLA-A*01;DKFZp686N10220;HEL-S-83;HLA-B57;HLA-B*3512;HLA-B*1513;HLA-B35;HLA-Cw;HLA-C;HLA B;B*56;HLA-B*27;HLA-B*;Cw;HLA-Bw62.4;HLA-Bw62.1;HLA-Bw62.3;HLA-Bw62.5;HLA-H;B-3501;HLA-B41;B-1510;HLA-G;HLA-CW;HLA-G2.2;HLA-E;HLA-F;HLAC;HLA-Cw*;HLA C HLA class I histocompatibility antigen, A-3 alpha chain;HLA class I histocompatibility antigen, B-7 alpha chain;Putative HLA class I histocompatibility antigen, alpha chain H;HLA class I histocompatibility antigen, alpha chain G;HLA class I histocompatibility antigen, alpha chain E no no 0 0 0 5.5 0.5 1 1 53.051 53.126 3 0.076438 15147 20230619_1885_Aki_TMTPro18x_K_F5 39.166 23.9 81409 75642 88971 85597 89007 103120 100380 104280 122000 89458 85703 82292 95626 73757 92251 94285 94945 81375 75398 69310 89744 85901 92795 102970 101210 106030 121540 91042 90065 83619 97089 77473 94019 93700 90723 77477 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 141960000 30360 1147 28524 56976;56977 46023 46023 1 9606 Homo sapiens 0.02418626166672766 WACLVVDEAHR Unmodified 1354.6452 0.64520425 1857 A0A8V8TR54;Q12873;Q12873-3;Q12873-2;A0A5F9ZHX5 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 0 0 0 5.5 0.5 1 1 52.278 52.353 3 0.035485 14938 20230619_1886_Aki_TMTPro18x_K_F6 41.401 25.51 51670 37632 49336 46021 39388 49653 47174 47532 57534 48009 45520 45691 56557 42533 51071 52600 51421 52114 47727 34539 50145 45852 41978 49872 47450 48719 57535 48447 47757 46393 57077 44542 52055 52666 49201 49501 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27158000 30361 1857 28525 56978;56979 46024 46024 1 9606 Homo sapiens -0.0179325456542756 WADPQISESNFSPK Unmodified 1604.7471 0.74708636 4375 Q96KB3;Q9BW91-2;Q9BW91;D6RAW2 NUDT9 ADP-ribose pyrophosphatase, mitochondrial yes no 0 0 0 6 0 1 56.991 57.063 3 9.9226E-12 16896 20230619_1886_Aki_TMTPro18x_K_F6 177.21 151.09 57070 45192 61070 59568 48053 61954 52241 57054 68815 73721 80562 74363 77182 64918 70479 89071 79697 94800 52791 41496 61500 59009 51145 62331 53002 59063 69648 73628 81901 75192 78558 68572 72406 89373 76269 89925 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100220000 30362 4375 28526 56980 46025 46025 1 9606 Homo sapiens -0.031097297326823536 WAEGGGHSR Unmodified 955.42603 0.426027 2218 B2R5M3;P05060;A0A0A0MT66 CHGB Secretogranin-1;PE-11;GAWK peptide;CCB peptide yes no 0 0 0 4 0 1 28.068 28.14 3 0.00059 4928 20230619_1883_Aki_TMTPro18x_K_F4 98.048 72.11 10618 7006.8 10023 17683 14494 11326 14472 19963 15940 11190 12011 9895.9 12009 11303 9136.6 7390.3 12871 8318.2 9801.6 6501.8 10341 16873 14664 12123 14645 19554 15986 11736 12490 10159 12131 11404 9534.8 7552.1 12247 7907.6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6020900 30363 2218 28527 56981 46026 46026 1 9606 Homo sapiens -0.053468977417537644 WAELLPLLQQCQVVR Unmodified 1852.0029 0.0029238935 1206 A0A140VJT8;P13489;A0A024RC87;E9PIM9;E9PMJ3;E9PLZ3;E9PIK5;E9PMA9;E9PR82;E9PMI1 RNH1 Ribonuclease inhibitor yes no 0 0 0 4.5 0.5 1 1 65.232 65.259 3 1.0361E-18 20250 20230619_1885_Aki_TMTPro18x_K_F5 198.14 185.29 40298 36228 37945 41611 38244 49122 48564 52210 53984 47580 42493 47487 52597 48077 52813 52352 52694 55113 37267 33204 38784 41691 40037 49156 48533 52978 54234 48341 44635 48225 53400 49792 53690 52702 50436 52309 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 187500000 30364 1206 28528 56982;56983 46027;46028 46028 2 9606 Homo sapiens 0.11100254850884994 WAEQYLK Unmodified 936.47052 0.47051757 3526 V9HW71;P30040;F8VY02 HEL-S-107;ERP29 Endoplasmic reticulum resident protein 29 yes no 0 0 0 7.5 0.5 1 1 54.967 55.033 2 0.0073584 15707 20230619_1888_Aki_TMTPro18x_K_F8 133.81 77.401 203820 219890 240220 211110 248380 240450 268550 232170 244700 218360 231160 176200 179940 142090 341920 192670 194210 183830 189120 201110 240920 214550 257390 240970 268850 237460 250000 220160 235560 179830 192750 150450 335860 192790 187170 174730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 200230000 30365 3526 28529 56984;56985 46029;46030 46030 2 9606 Homo sapiens -0.00025886648290907033 WAFSCGTWLPSR Unmodified 1466.6765 0.67650438 4586 Q9NRN7;Q9NRN7-2 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase yes no 0 0 0 6 0 1 62.328 62.38 2 0.00064628 19184 20230619_1886_Aki_TMTPro18x_K_F6 118.28 97.758 97911 101670 97476 84828 93945 131890 94872 93751 136690 33527 26811 34862 28933 27164 46237 40420 38937 40638 90684 92905 98951 87765 98194 128920 96842 96797 132190 37390 32864 35109 30362 28963 46278 40433 37337 38589 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93997000 30366 4586 28530 56986 46031 46031 1 9606 Homo sapiens -0.03816681531316135 WAGVEDPK Unmodified 900.43413 0.43413207 3027 H0Y714;Q96G21;E7ENR5;B8ZZ47 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 yes no 0 0 0 4 0 1 48.546 48.584 2 0.021462 13316 20230619_1883_Aki_TMTPro18x_K_F4 91.9 62.813 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30367 3027 28531 56987 46032 46032 1 9606 Homo sapiens -0.020067635450004673 WAIAQLNYADMLK Unmodified 1535.7806 0.7806351 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3 0 1 64.097 64.127 3 0.00051092 20173 20230619_1882_Aki_TMTPro18x_K_F3 91.858 77.6 38486 28788 36646 34782 34779 54422 45522 43171 51814 29368 27442 19066 23386 20024 31568 27467 27140 17966 35554 26416 37368 34891 36696 53231 45445 44497 51377 30163 29089 19903 24396 21011 31686 26969 25947 17198 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89151000 30368 3881 28532 56988 46033 46033 1 9606 Homo sapiens 0.034176005055087444 WALHILAR Unmodified 978.57632 0.57632005 3354 O95373 IPO7 Importin-7 yes yes 0 0 0 6.5 0.5 1 1 52.464 52.538 3 0.00013205 14996 20230619_1886_Aki_TMTPro18x_K_F6 146.21 130.05 68373 49046 61530 63363 44278 49062 66252 67800 80632 80930 55800 49818 69218 59388 54759 72182 72147 61853 63121 45044 62827 62655 47981 51128 65973 68306 80401 80140 58957 52312 69568 61640 56987 71705 68791 58895 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162810000 30369 3354 28533 56989;56990 46034 46034 1 9606 Homo sapiens 0.08617493987844682 WALHIVAR Unmodified 964.56067 0.56066998 3244 O15397-2;O15397;F5H244 IPO8 Importin-8 yes no 0 0 0 5 0 1 47.947 48.023 3 0.021228 12902 20230619_1885_Aki_TMTPro18x_K_F5 73.324 52.994 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30370 3244 28534 56991 46035 46035 1 9606 Homo sapiens 0.07697207470801004 WALSQSNPSALR Unmodified 1328.6837 0.68369824 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;A0A7P0TAQ1;Q96IF9;A0A7P0Z4C6;Q0IIN5;Q9NTC4;Q9HAP0 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 3.5 0.5 1 1 50.492 50.545 2 2.8346E-17 14211 20230619_1883_Aki_TMTPro18x_K_F4 220.17 175.48 371820 330020 345980 335040 446930 659830 478450 439970 667360 152190 106950 118130 126280 102290 218520 142670 139250 128220 343790 302150 355350 342180 458800 637070 485720 456850 645210 169450 137240 121140 132860 108220 215780 142160 133920 121980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 390250000 30371 3656 28535 56992;56993 46036;46037 46037 2 9606 Homo sapiens 0.032503743407460206 WASEPEHDHR Unmodified 1262.5428 0.54284767 3411 Q8TBT6;P08574 CYC1 Cytochrome c1, heme protein, mitochondrial yes no 0 0 0 1.5 0.5 1 1 29.297 29.333 3 3.4436E-07 5465 20230619_1881_Aki_TMTPro18x_K_F2 176.48 162.58 55807 48250 56702 61905 75862 84682 62455 70073 98581 57881 83816 85434 75923 70473 69884 66823 99965 88411 51628 44277 57840 61671 77002 83551 64869 72253 97625 60082 86332 84984 77532 72980 72802 68435 95275 83787 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 77344000 30372 3411 28536 56994;56995 46038;46039;46040 46040 3 9606 Homo sapiens -0.07792204312681861 WATHGEPSPVNSHPQR Unmodified 1798.8499 0.84992873 3806 Q06210-2;Q06210;A0A6I8PRN4;A0A6I8PTT9 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 0 0 0 6.5 0.5 1 1 33.191 33.255 4 5.793E-19 6959 20230619_1886_Aki_TMTPro18x_K_F6 194.77 179.62 27415 20811 31562 31398 28927 32403 27432 30015 32080 28796 37428 33832 34531 30600 33308 30093 34911 38985 25371 19142 31671 30842 30214 32622 27921 30799 32611 29327 37998 34022 35280 31651 33963 30759 33415 36919 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 51311000 30373 3806 28537 56996;56997 46041;46042 46042 2 9606 Homo sapiens -0.017542242213266945 WAVVSGATDGIGK Unmodified 1259.651 0.65100113 3116 I6L975;Q3SXM5-2;Q3SXM5;H3BQI7;H3BT52 HSDL1 Inactive hydroxysteroid dehydrogenase-like protein 1 yes no 0 0 0 1 0 1 57.433 57.433 3 0.078303 17499 20230619_1880_Aki_TMTPro18x_K_F1 38.769 19.526 53467 49051 52089 58588 50031 62169 59817 60873 67781 65388 56994 65800 68772 60906 61918 70886 69874 79719 49466 44970 53049 58433 52455 62552 59993 62398 68202 65860 59566 66585 69520 63524 63574 71539 66846 75588 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57370000 30374 3116 28538 56998 46043 46043 1 9606 Homo sapiens 0.03156167217866823 WCAEGGNLICCDFCHNAFCK Unmodified 2517.9745 0.97449537 1951 P46100;P46100-4;P46100-3;P46100-5;P46100-2;A4LAA3;P46100-6;A0A096LNL9;A0A096LNW1;A0A096LNL6;A0A068A230;A0A096LNN3 ATRX Transcriptional regulator ATRX yes no 0 0 0 8 0 1 60.013 60.05 3 0.071136 17826 20230619_1888_Aki_TMTPro18x_K_F8 20.864 19.835 14788 10075 12005 16154 11428 15058 16696 13315 19634 16115 15301 16288 21430 16493 15404 19509 19060 21104 13638 9278 12449 15783 12085 15257 16604 13814 19657 16157 16173 16536 21384 17178 15994 19633 18215 20020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6743600 30375 1951 28539 56999 46044 46044 1 9606 Homo sapiens -0.22377290236727276 WCAHTNVELK Unmodified 1256.5972 0.59719142 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 8 0 1 45.391 45.419 3 0.020789 11652 20230619_1888_Aki_TMTPro18x_K_F8 61.958 28.959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30376 3758 28540 57000 46045 46045 1 9606 Homo sapiens -0.020843284854890953 WCAIGHQER Unmodified 1155.5244 0.52436083 2791 CON__Q0IIK2;CON__Q29443 yes no 0 0 0 6.5 0.5 1 1 37.001 37.068 3 0.00026551 8374 20230619_1886_Aki_TMTPro18x_K_F6 105.52 86.278 + 37966 37870 33816 38769 49972 56465 41956 53149 69498 41460 50718 50621 56816 42641 49843 52905 59220 57469 35122 34662 34970 39322 50491 55683 43617 54164 68405 42861 53172 50739 57442 44819 51337 53245 56559 54543 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51661000 30377 2791 28541 57001;57002 46046 46046 1 -0.047180374882373144 WCDDYFFIAHR Unmodified 1528.6558 0.65576893 3557 P36551 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 0 0 0 8 0 1 59.01 59.051 3 0.00091248 17413 20230619_1888_Aki_TMTPro18x_K_F8 91.701 85.468 15894 12178 21045 15274 16672 19027 19131 16382 22033 15183 16349 13781 17484 14974 19379 15610 17171 17045 14730 11178 20849 15231 17722 18893 19239 16892 22033 15387 17082 14107 17899 15446 19529 15771 16449 16175 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11769000 30378 3557 28542 57003 46047 46047 1 9606 Homo sapiens -0.08741271910980686 WCEYGLTFTEK Unmodified 1432.6333 0.63330216 62 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;P45880-2;P45880-1;B4DKM5;Q5JSD2;Q5JSD1;A2A3S1 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 6.5 0.5 1 1 61.607 61.653 2 1.3395E-16 18494 20230619_1887_Aki_TMTPro18x_K_F7 261.16 220.44 331860 313240 376860 414120 333720 422420 432230 433540 425000 440960 377460 398650 532220 422830 375980 477790 374960 395590 307500 287450 378780 409980 352850 426570 429940 442340 431870 443950 396360 407440 530590 438340 385580 474430 358910 376520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 341630000 30379 62 28543 57004;57005 46048 46048 1 9606 Homo sapiens -0.06570916099258284 WCNEHLK Unmodified 985.44399 0.44398525 3484;3299;3886 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;A0A7I2V3E6;A0A087WWY3;F8WE98;Q14315;Q14315-2;O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;A0A804HJC2 FLNA;FLNC;FLNB Filamin-A;Filamin-C;Filamin-B no no 0 0 0 6.5 0.5 1 1 40.944 41.025 3 0.0096184 9649 20230619_1887_Aki_TMTPro18x_K_F7 93.429 64.685 253480 194220 234010 218970 283930 307040 304290 295910 379010 271370 298320 294510 326540 241290 300650 349690 348350 274100 234140 178080 240030 220370 291610 303570 307800 302330 378330 276480 311090 296360 330990 256400 309040 345310 332330 261410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 806930000 30380 3484;3886;3299 28544 57006;57007 46049;46050 46050 2 9606 Homo sapiens -0.04931898811264546 WCNSGSQEEGYSQYQR Unmodified 1977.7912 0.7911528 222 Q6I9Y2;A0A024R332 THOC7;NIF3L1BP1 THO complex subunit 7 homolog yes no 0 0 0 4 0 1 43.732 43.776 3 2.1003E-08 11176 20230619_1883_Aki_TMTPro18x_K_F4 136.39 135.66 32876 24550 30862 30829 38708 36888 43019 44506 46631 40068 45084 46919 48033 41067 39719 47841 56744 58948 30367 22536 31636 30712 39655 37025 43230 44806 47218 40939 46465 47134 48556 42928 41518 48560 54143 55863 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38916000 30381 222 28545 57008 46051 46051 1 9606 Homo sapiens -0.1586311336864128 WCSYSASNNSTIDSAWK Unmodified 1975.837 0.83704036 594 Q7Z6Z7;Q7Z6Z7-3;Q7Z6Z7-2;A0A024R9W5;A0A024R9U8;A0A024R9Y3;A0A994J483;Q5H924;Q5H962;B4DGF6 HUWE1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 1 0 1 57.924 57.924 3 1.4177E-09 17668 20230619_1880_Aki_TMTPro18x_K_F1 138.19 120.05 29493 25345 34239 34425 28173 29984 33375 32691 33677 38226 35377 39205 43451 36520 37611 44363 46760 47420 27316 23272 34294 33964 29853 30721 33378 33371 34396 38353 36600 39658 43819 38184 38889 44605 44656 45005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43981000 30382 594 28546 57009 46052 46052 1 9606 Homo sapiens -0.1118446818643406 WDAWNELK Unmodified 1060.4978 0.49779495 3396 P07108;B8ZWD1;A0A024RAF2;B8ZWD9;P07108-3;P07108-2;P07108-4;P07108-5;B8ZWD8 DBI Acyl-CoA-binding protein yes no 0 0 0 6.5 0.5 1 1 61.443 61.49 2 0.00087441 18778 20230619_1886_Aki_TMTPro18x_K_F6 154.12 98.614 864070 763760 832720 918790 649930 938850 816650 839490 984100 1014900 1011400 962670 1128200 958880 1169300 1376400 1163300 1275700 799140 700360 846500 915360 696090 945130 819380 869280 994460 1014900 1041500 980540 1149700 1011300 1189200 1370000 1113900 1212300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1113600000 30383 3396 28547 57010;57011 46053;46054;46055 46053 3 9606 Homo sapiens -0.030034031079367196 WDDPYYDIAR Unmodified 1312.5724 0.57241646 3810 Q07960;H0YE29;B4DPZ4;E9PNR6 ARHGAP1 Rho GTPase-activating protein 1 yes no 0 0 0 3.5 0.5 1 1 57.431 57.449 2 2.7982E-09 17377 20230619_1882_Aki_TMTPro18x_K_F3 195.32 181.55 59882 51316 61805 67478 66619 80375 82929 92801 83601 94582 82253 90862 92827 82484 93537 108380 101530 106620 55402 47104 62756 66992 69278 80543 82706 93928 85164 95328 85009 92125 94478 86720 95627 108350 97100 101270 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82660000 30384 3810 28548 57012;57013 46056 46056 1 9606 Homo sapiens -0.07136685087198202 WDEAFRK Unmodified 950.46102 0.46101552 3515 Q5TZP7;P27695;G3V3M6;G3V5Q1;H7C4A8;A0A2S1WCK0 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 1 7.5 0.5 1 1 48.033 48.106 3 0.022235 12704 20230619_1888_Aki_TMTPro18x_K_F8 92.491 57.599 565300 408120 505040 559590 499080 679840 604760 580250 770980 680280 711880 826890 885350 722540 623650 1144200 1059500 1088400 521870 375050 518490 554010 523120 675570 608650 602450 773530 686950 741220 829850 886060 771000 665720 1138100 1009700 1034300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 417870000 30385 3515 28549 57014;57015 46057;46058 46058 2 9606 Homo sapiens -0.016196549338019395 WDETKGEDNIDFMPTILSR Unmodified 2266.0576 0.057597819 2188 B1AHB0;P33992;Q53FG5;B4DQ39;B1AHB1;B3KVF0;B4DVK5;Q59F49 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 1 5 0 1 62.313 62.36 3 0.089828 18983 20230619_1885_Aki_TMTPro18x_K_F5 38.915 30.315 116280 106660 132900 122120 92328 110940 122840 123140 120440 128530 147680 126250 167040 90290 148430 125240 134690 114160 107730 97750 132950 122000 99921 113320 122120 125130 123930 129460 150950 127130 168570 96398 150360 124760 128860 108630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 320480000 30386 2188 28550 57016 46059 46059 1 9606 Homo sapiens -0.024788676496427797 WDETPGR Unmodified 859.38243 0.38243085 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 0 2.5 0.5 1 1 39.852 39.915 2 0.018314 9761 20230619_1881_Aki_TMTPro18x_K_F2 107.43 69.191 395500 300560 351530 386980 403460 480090 432110 468260 545310 461940 547310 546370 521770 468210 472430 527950 614290 605460 365210 275950 361820 384880 416290 477960 437580 478860 548810 469900 560250 548300 531310 488670 489390 533770 586320 574280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 227470000 30387 3309 28551 57017;57018 46060 46060 1 9606 Homo sapiens -0.052885072389017296 WDFTPCK Unmodified 952.41129 0.41128813 3566 P38606-2;P38606;A0A994J738;A0A994J477;C9JVW8;C9JA17 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 0 8 0 1 55.336 55.398 3 0.059258 15922 20230619_1888_Aki_TMTPro18x_K_F8 56.011 29.409 77035 67212 72285 75040 61402 75802 76634 76874 84296 67230 62544 50147 64748 52788 77599 77344 63154 57010 71225 61592 73687 75182 65124 76616 76632 78205 84533 67977 65250 51868 66606 55660 77884 76197 60523 54386 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32481000 30388 3566 28552 57019 46061 46061 1 9606 Homo sapiens -0.06682105934135052 WDGVPFILR Unmodified 1101.5971 0.59711507 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;A0A8Q3SIS5;A0A8Q3SIN6;B4DYA7;A0A4P8W0G4 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 3 0 1 63.31 63.341 2 0.074456 19806 20230619_1882_Aki_TMTPro18x_K_F3 73.248 42.53 365590 334300 386560 363530 421590 467590 467510 458290 450800 438690 420000 374160 384370 327200 628410 402200 379890 434430 338460 306220 391390 366320 436160 464790 468210 468160 459060 442400 431100 381300 404770 343180 619780 405490 366250 412080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167250000 30389 1464 28553 57020 46062 46062 1 9606 Homo sapiens 0.05038039576857045 WDLFREDLVR Unmodified 1347.6935 0.69353465 4244 Q8NBL1;H7C5H0;B4DJ97;Q9NRV2 POGLUT1 Protein O-glucosyltransferase 1 yes no 0 0 1 7 0 1 60.035 60.081 3 0.00016725 17833 20230619_1887_Aki_TMTPro18x_K_F7 125.72 94.831 93136 92366 103160 90114 99408 113350 96071 104560 135970 97771 104400 102780 115730 96300 123030 132430 116910 118600 86311 84510 103820 91589 103540 112700 98333 107200 134910 99421 109110 103990 118100 101450 124700 131690 111930 112790 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57534000 30390 4244 28554 57021 46063;46064 46063 2 9606 Homo sapiens 0.03359562346122402 WDLSELPK Unmodified 986.5073 0.50729701 1328 A0A1X7SBZ2;A0A5H1ZRQ2;Q59F66;Q92841;Q92841-1;Q92841-3;Q92841-2;B4DZQ7 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 6.67 0.471 1 2 60.405 60.453 2;3 0.0021851 18304 20230619_1886_Aki_TMTPro18x_K_F6 141.39 82.408 113720 87651 122360 112860 108630 128520 129960 108590 120390 139120 145530 115490 115850 89516 178250 99156 94773 97896 105180 80472 123330 112120 114480 128300 129530 113180 124240 138210 146770 117430 121960 93772 175120 99690 91507 92984 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55650000 30391 1328 28555 57022;57023;57024 46065;46066 46065 2 9606 Homo sapiens 0.013503651776204606 WDLSPEQIK Unmodified 1114.5659 0.56587452 2141 A8K9T8;Q9BYT8;B3KU23;Q9BQD0 NLN Neurolysin, mitochondrial yes no 0 0 0 5.5 0.5 2 2 57.423 57.489 2;3 0.0015887 17077 20230619_1886_Aki_TMTPro18x_K_F6 114.39 72.311 177170 151010 167650 177070 171800 222610 199100 211650 219390 241790 222970 234480 257940 213620 229960 270050 233190 257770 163790 138460 171270 177310 179140 221320 199840 217680 222700 242480 230230 237660 260760 224050 234740 269670 223250 244870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 180850000 30392 2141 28556 57025;57026;57027;57028 46067;46068 46068 2 9606 Homo sapiens 0.01317421752082737 WDPTANEDPEWILVEK Unmodified 1940.9156 0.91560825 3884 Q14257;Q14257-2;A8MXP8 RCN2 Reticulocalbin-2 yes no 0 0 0 4 1.41 1 1 1 1 1 63.893 63.921 3 0.0083167 20100 20230619_1882_Aki_TMTPro18x_K_F3 65.298 54.664 42785 37319 39687 36768 34067 49572 38335 44295 47150 45315 47746 52625 51473 46713 50130 58651 52764 66717 39555 34162 40482 37376 36062 49021 38711 45617 47559 45970 49162 52901 52374 49008 51198 59167 50555 63231 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254090000 30393 3884 28557 57029;57030;57031;57032;57033 46069 46069 1 9606 Homo sapiens -0.017212926096817682 WDPTGEQRPPPQGETGK Unmodified 1878.886 0.88603946 2830 D3DVC4;P48681;Q2YDX4 NES Nestin yes no 0 0 1 4 0 1 42.835 42.879 3 0.00033153 10720 20230619_1883_Aki_TMTPro18x_K_F4 82.01 60.59 52259 36110 42331 45037 46599 58087 70553 67679 85184 92734 70947 70702 108300 71557 52738 107860 81278 76335 48200 33157 43940 44936 48795 57945 70144 69098 85490 91700 75023 72832 106600 75773 56483 105880 77456 72856 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55731000 30394 2830 28558 57034 46070 46070 1 9606 Homo sapiens -0.018248118351721132 WDPVVLK Unmodified 855.48544 0.48543935 2653 B4E343;Q9BVJ6 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 0 0 0 8 0 1 58.701 58.748 2 0.026649 17274 20230619_1888_Aki_TMTPro18x_K_F8 91.041 50.012 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30395 2653 28559 57035 46071 46071 1 9606 Homo sapiens 0.05191605219704343 WDQDYDR Unmodified 996.39372 0.39372381 1652 D6RG15;A0A7I2V2U8;A0A7I2V5D3;Q6IBS0 TWF2 Twinfilin-2 yes no 0 0 0 1.5 0.5 1 1 42.535 42.574 2 0.049759 11247 20230619_1880_Aki_TMTPro18x_K_F1 86.332 74.125 63205 44360 68191 66954 79047 85778 77376 76269 89672 70938 86653 87037 80938 71370 84707 74391 92317 81822 58430 40816 69012 65982 81188 85064 78497 78432 90462 72504 88816 87097 82991 74282 86426 75170 88182 77674 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85802000 30396 1652 28560 57036;57037 46072 46072 1 9606 Homo sapiens -0.10461729935434505 WDQSTFLGR Unmodified 1108.5302 0.53015772 1841 S4R3N9;A0A8V8TP06;B4DRS6;Q9BWM7;A0A8V8TM72 SFXN3 Sideroflexin;Sideroflexin-3 yes no 0 0 0 7.5 0.5 1 1 52.732 52.805 2 0.00066442 14756 20230619_1888_Aki_TMTPro18x_K_F8 141.48 0 393740 383500 409170 498200 435330 493770 521860 517210 580420 517910 525570 483740 576380 479040 549160 590380 531330 551400 364630 351830 415390 493520 452470 500100 522890 526840 585680 522470 543850 492840 585250 500230 558150 589220 508690 524070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 334240000 30397 1841 28561 57038;57039 46073;46074 46074 2 9606 Homo sapiens -0.019766157048934474 WDQTADQTPGATPK Unmodified 1514.7001 0.70013617 3309 O75533;Q7Z497;A0JLT9;Q32Q20;A0PJH5 SF3B1 Splicing factor 3B subunit 1 yes no 0 0 0 4.5 0.5 1 1 46.704 46.763 3 7.6509E-07 12475 20230619_1883_Aki_TMTPro18x_K_F4 130.1 113.98 206120 157910 185360 205100 227400 244400 233340 217550 266170 239550 263710 286490 264540 228310 249060 268990 280420 270420 190360 144990 190780 203720 233060 243540 235890 224750 269140 242400 270890 286670 269270 239520 255370 269700 267930 256870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 402190000 30398 3309 28562 57040;57041 46075;46076 46075 2 9606 Homo sapiens -0.03662589283817397 WDTAFDHEK Unmodified 1147.4934 0.49343786 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 4 0.816 1 1 1 48.127 48.193 3 0.00019867 13128 20230619_1883_Aki_TMTPro18x_K_F4 126.39 99.273 250340 188570 224070 228290 195190 253580 252910 231850 258220 284780 293690 284530 320930 247770 256860 305640 305550 324360 231170 173030 229450 227650 206900 253930 251860 239840 264290 284920 300740 287650 323470 260020 265280 307100 292010 307810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188960000 30399 1853 28563 57042;57043;57044 46077 46077 1 9606 Homo sapiens -0.0744091232147639 WDTGENPIYK Unmodified 1221.5666 0.5666028 1647 P05556;A0A7I2V2F9;E7EUI6;H7C4K3 ITGB1 Integrin beta-1;Integrin beta yes no 0 0 0 5.5 0.5 1 1 53.885 53.958 3 0.0094186 15624 20230619_1886_Aki_TMTPro18x_K_F6 60.298 42.862 58896 51725 59761 61644 52283 72415 67945 68588 75446 77607 76004 79191 77721 62615 83076 86874 85273 96232 54491 47428 60559 61590 55432 72286 67845 70564 76475 77983 78076 79761 79503 66455 84529 87412 81643 91263 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119210000 30400 1647 28564 57045;57046 46078 46078 1 9606 Homo sapiens -0.03531783598873517 WDVDDWDNENSSAR Unmodified 1707.6761 0.67610626 2337;3778 Q01082;B2ZZ89;A0A087WUZ3;K9MS24;F8W6C1;Q53RC4;Q59FA9;Q01082-2 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1.5 0.5 1 1 55.792 55.801 2 4.8668E-11 16917 20230619_1881_Aki_TMTPro18x_K_F2 170.62 139.43 18235 14659 20170 17652 18562 21892 21929 19434 24128 25352 27056 26733 26811 27946 26547 27192 28447 32445 16874 13447 20292 17643 19503 21758 21985 20186 24577 25354 27613 27116 27394 28734 27110 27632 27227 30746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64600000 30401 2337;3778 28565 57047;57048 46079 46079 1 9606 Homo sapiens -0.1494247450812054 WDVSTTK Unmodified 835.40758 0.40758296 3402 P07814;V9GYZ6;Q3KQZ8;B4DKX5;H6WCP5;V9GZ76 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 6.5 0.5 1 1 47.489 47.574 2 0.0094732 12438 20230619_1887_Aki_TMTPro18x_K_F7 124.08 72.391 539950 385340 450620 494130 603370 618460 552160 588050 734550 627550 703190 689860 680070 583580 602480 686790 813660 704790 498200 353870 467670 491650 613440 615320 565320 603690 736460 634220 721700 694020 691410 610910 626070 689310 775710 669630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 737190000 30402 3402 28566 57049;57050 46080 46080 1 9606 Homo sapiens -0.016704524363490236 WDYLTQVEK Unmodified 1180.5764 0.57643921 552 Q6NVY0;A0A024R904;Q9HB71;Q9HB71-3 CACYBP Calcyclin-binding protein yes no 0 0 0 6.2 0.748 1 2 2 60.056 60.11 2;3 4.3742E-06 18160 20230619_1886_Aki_TMTPro18x_K_F6 209.21 141 919970 758170 825490 922630 738920 917530 862510 838480 911050 1217000 1112400 1084300 1231500 1008900 882310 1555400 835270 1185700 849990 695490 845780 918130 778690 926320 864400 872310 935030 1205100 1136400 1105000 1236000 1071800 904730 1531500 802060 1128800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2300100000 30403 552 28567 57051;57052;57053;57054;57055 46081;46082;46083 46082 3 9606 Homo sapiens -0.006625955934850936 WEAAEGLLQEALDK Unmodified 1571.7831 0.78313752 3188 Q53HJ6;M0QXB4;O14579;O14579-2;Q7Z4Z1 COPE Coatomer subunit epsilon yes no 0 0 0 3.5 1.12 1 1 1 1 65.663 65.687 3 9.5843E-07 20424 20230619_1885_Aki_TMTPro18x_K_F5 126.09 99.962 36694 30181 32324 38655 34526 35648 32260 36825 40637 40783 42661 46415 54344 45178 42087 55292 50668 55563 33898 27700 33261 38295 35635 36310 32942 37645 41030 41178 44200 46837 54510 47180 43560 55375 48430 52753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135450000 30404 3188 28568 57056;57057;57058;57059 46084 46084 1 9606 Homo sapiens 0.020117274441872723 WEDAIPLALK Unmodified 1154.6336 0.63356015 1222 A0A140VK27;P09960;B4DVZ8;P09960-4;Q49AK0 LTA4H Leukotriene A-4 hydrolase;Leukotriene A(4) hydrolase yes no 0 0 0 7.33 0.471 2 1 63.299 63.328 2;3 0.0026719 19351 20230619_1887_Aki_TMTPro18x_K_F7 79.974 61.662 230500 196640 230880 258950 248640 264930 260840 247140 273070 305000 305950 316140 316580 279270 302820 363630 314450 370070 213200 180500 234930 256410 257070 267060 262710 255340 279030 305430 312940 319230 322170 293720 309180 364230 301140 351230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 374900000 30405 1222 28569 57060;57061;57062 46085;46086 46086 2 9606 Homo sapiens 0.0624287168286628 WEDAQITLLK Unmodified 1215.6499 0.6499385 2353 Q53GG3;B3KN57;B3KML1;O60749;O60749-2 SNX2 Sorting nexin-2 yes no 0 0 0 7 0 1 62.075 62.111 3 0.015385 18743 20230619_1887_Aki_TMTPro18x_K_F7 69.01 49.912 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30406 2353 28570 57063 46087 46087 1 9606 Homo sapiens 0.05073952848965746 WEDRGPSGQGQGQFLIQQVTLK Unmodified 2471.2557 0.25572077 1401 Q13724;A0A384MDR6;Q58F09;Q13724-2;A0A8I5KTK5;A0A3B3IRK6;A0A3B3IRW2;A8K9K4;A0A3B3IS52 MOGS;GCS1 Mannosyl-oligosaccharide glucosidase yes no 0 0 1 2 0 1 59.246 59.258 4 2.8266E-08 18328 20230619_1881_Aki_TMTPro18x_K_F2 114.78 97.501 28705 25891 31916 27941 29022 31482 33403 37643 35876 32236 35097 32874 32573 32527 40727 34891 32484 37219 26584 23716 32087 28127 30476 31715 33525 37864 36363 32885 35943 33351 33735 33672 40786 35177 31193 35308 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15991000 30407 1401 28571 57064 46088 46088 1 9606 Homo sapiens 0.07894314324357765 WEESGPQFITNSEEVR Unmodified 1906.8697 0.86972069 3845 Q13257 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes yes 0 0 0 2.5 0.5 1 1 56.308 56.335 3 5.3509E-12 16904 20230619_1882_Aki_TMTPro18x_K_F3 167.94 141.39 57827 49856 53866 56491 50766 66882 60599 57172 75749 62181 57219 66556 75734 65047 57657 86796 71631 89323 53458 45695 55033 56648 53357 66604 60983 59224 75562 62757 60439 67335 75878 68301 59887 86915 68524 84748 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 86580000 30408 3845 28572 57065;57066 46089;46090 46090 2 9606 Homo sapiens -0.0474393779188631 WEFPNFNSR Unmodified 1195.5411 0.54105675 2345 B3KM73;D3DVL7;B4DU42;Q969Z0-2;Q969Z0;B3KRS4;B3KMT3 TBRG4 Protein TBRG4 yes no 0 0 0 2 0 1 60.112 60.124 2 0.00013906 18654 20230619_1881_Aki_TMTPro18x_K_F2 149.27 129.06 95773 85005 96111 100740 82991 109560 105250 107460 111690 128910 125710 118910 129330 118960 135370 137910 123990 142790 88608 77936 97463 100580 87968 110030 105080 110480 114060 128800 128470 121200 132210 123700 136940 138560 118870 135500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156910000 30409 2345 28573 57067 46091 46091 1 9606 Homo sapiens -0.04889213330625353 WEGLVYAPPGK Unmodified 1215.6288 0.62880913 1525 A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 0 0 0 1.5 0.5 1 1 60.215 60.221 3 0.0020362 18722 20230619_1881_Aki_TMTPro18x_K_F2 80.763 54.639 40001 33589 38946 43096 30152 47482 45112 36870 49864 57554 48384 56562 63149 61220 52060 71752 73655 86864 36985 30826 39566 42782 32530 47403 44750 38982 50530 57048 50414 57606 63536 63554 54437 72710 70355 82295 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167500000 30410 1525 28574 57068;57069 46092 46092 1 9606 Homo sapiens 0.02961987540129485 WELLQQVDTSTR Unmodified 1474.7416 0.74160705 2778 H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2;H6VRF9 KRT1 Keratin, type II cytoskeletal 1 yes no 0 0 0 6.5 0.5 2 2 60.761 60.811 2;3 4.2927E-31 18111 20230619_1887_Aki_TMTPro18x_K_F7 272.94 243.56 + 55094 65057 83863 123800 2069300 131440 494890 117130 236640 56349 65455 65637 84232 522320 107600 61531 78546 96443 51305 59944 110000 120110 1932300 138010 580420 120190 250930 61591 76415 81658 89594 497360 107150 71729 75557 91167 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 303480000 30411 2778 28575 57070;57071;57072;57073 46093;46094;46095 46095 3 9606 Homo sapiens 0.023225914754902988 WELNPEIVAR Unmodified 1225.6455 0.64552182 4470 Q9BYD2 MRPL9 39S ribosomal protein L9, mitochondrial yes yes 0 0 0 5.5 0.5 1 1 57.767 57.831 2 1.4312E-06 17207 20230619_1886_Aki_TMTPro18x_K_F6 173.37 128.76 129700 105170 115370 132710 124010 159770 157610 146750 193330 161220 153960 155400 171240 137860 153240 175220 144250 166410 119820 96517 118680 132080 129290 159140 157980 151220 193290 162070 160580 157450 173310 144790 155780 174930 138250 158070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 143860000 30412 4470 28576 57074;57075 46096;46097 46097 2 9606 Homo sapiens 0.04172488426070231 WELNSGDGAFYGPK Unmodified 1539.6994 0.69940789 2326 P26639;Q53GX7;B2RDX5;P26639-2;Q5M7Z9;B4DKZ9;B3KTN2 TARS Threonine--tRNA ligase, cytoplasmic yes no 0 0 0 6.5 0.5 1 1 59.442 59.496 3 6.1341E-09 17895 20230619_1886_Aki_TMTPro18x_K_F6 160.48 137.24 160430 167630 187070 190440 162870 194140 189170 194240 215290 223570 213300 253860 249080 202200 226630 269890 254820 297090 148800 153550 187490 190570 171850 196050 190110 199230 217900 225240 220800 254500 251980 213940 232660 271500 243830 281730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 268740000 30413 2326 28577 57076;57077 46098;46099 46098 2 9606 Homo sapiens -0.0488538393287854 WEPYDPEK Unmodified 1062.4658 0.46582612 3887 Q14320 FAM50A Protein FAM50A yes yes 0 0 0 3 0 1 51.882 51.948 2 5.2715E-06 15009 20230619_1882_Aki_TMTPro18x_K_F3 152.63 108.82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30414 3887 28578 57078 46100 46100 1 9606 Homo sapiens -0.06290815581724019 WEQDYHLQPMGK Unmodified 1530.6925 0.69254837 1714 A0A7P0TBI1;A0A7P0TBC5;Q4KMQ2-3;Q4KMQ2;Q4KMQ2-2;A0A7P0TAW4;A0A7P0TBD5;A0A7P0T8Y2;B4E1V1;A0A7P0TAF4;B4DZA5;Q4KMQ2-4 ANO6 Anoctamin-6;Anoctamin yes no 0 0 0 6.5 0.5 1 1 51.335 51.412 3 0.00067685 14515 20230619_1886_Aki_TMTPro18x_K_F6 91.914 78.511 48856 38943 47532 55636 43768 59267 59567 57067 62309 64201 68878 70103 66643 61311 64778 78786 73650 82992 45159 35789 48410 54835 46263 59559 59229 58656 63578 64676 70279 70624 68037 64441 66476 79080 70447 78747 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85737000 30415 1714 28579 57079;57080 46101 46101 1 9606 Homo sapiens -0.05157020085107433 WEQVPLIK Unmodified 1011.5753 0.57531699 3498 Q6FGU2;P23919;Q53F55;P23919-2 DTYMK Thymidylate kinase yes no 0 0 0 4.5 3.5 1 1 59.539 59.58 3 0.02105 17628 20230619_1888_Aki_TMTPro18x_K_F8 67.563 39.164 28847 22957 25422 26896 24105 26169 26258 27835 27757 30900 33071 30971 35918 28818 29386 37508 34804 32936 26643 21054 26095 26838 25204 26563 26415 28401 28421 31057 33786 31387 36247 30258 30340 37274 33235 31338 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19066000 30416 3498 28580 57081;57082 46102;46103 46103 2 9606 Homo sapiens 0.06999234828276713 WETFCTSSLGETNK Unmodified 1658.7246 0.72463636 336 Q5H9R7-5;Q5H9R7;Q5H9R7-2;Q5H9R7-6;Q5H9R7-4;E9PKF6;H7BXH2;A0A024R5F3;Q5H9R7-3;E9PQP7;B4DYU6;B4DTT7;B4E0C2;H0YEN2;Q7L294;H0YDW1 PPP6R3;SAPS3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 0 0 0 6.5 0.5 1 1 57.589 57.651 3 1.2862E-05 16812 20230619_1887_Aki_TMTPro18x_K_F7 116.19 104.57 39190 29714 31023 35712 26272 33686 33081 34186 42253 44679 40360 43082 49883 38941 36424 49878 50239 50988 36159 27263 32154 35548 27921 34223 33252 35173 42481 44541 41918 43661 49961 40907 38111 49966 47940 48414 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 395440000 30417 336 28581 57083;57084 46104 46104 1 9606 Homo sapiens -0.07837697192621818 WETPYMHALAAAASSK Unmodified 1732.8243 0.82429083 3889 V9HWB2;Q14353;B4DMJ3;Q14353-2 HEL-S-20;GAMT Guanidinoacetate N-methyltransferase yes no 0 0 0 3 0 1 60.751 60.78 3 2.7667E-06 18679 20230619_1882_Aki_TMTPro18x_K_F3 116.35 102.67 41850 30529 36675 39453 31037 39579 38967 34735 42430 43784 46928 48153 47190 46431 47472 47712 49511 56704 38632 28035 37623 39105 32953 39890 38943 36088 43211 43908 47966 48620 48209 48005 48384 48432 47402 53736 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49196000 30418 3889 28582 57085 46105 46105 1 9606 Homo sapiens -0.012808347879627036 WEWLVNQHR Unmodified 1266.6258 0.62578944 4458 Q9BWJ5 SF3B5 Splicing factor 3B subunit 5 yes yes 0 0 0 2.5 0.5 1 1 54.372 54.407 3 8.4067E-13 16085 20230619_1882_Aki_TMTPro18x_K_F3 207.29 149.12 90989 61475 90193 94384 72315 98669 96718 98027 116540 117200 107590 116380 122620 108640 105460 124630 118550 123730 84037 56585 91471 92636 77356 99346 96738 100700 117280 117400 111520 117880 123900 113150 108370 124890 113340 117510 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 234870000 30419 4458 28583 57086;57087 46106;46107;46108 46108 3 9606 Homo sapiens 0.003141572059803366 WFCHIQHYPGIR Unmodified 1612.7721 0.7721361 3253 O43324 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 0 0 0 5.5 0.5 1 1 47.563 47.641 4 2.6462E-05 12867 20230619_1886_Aki_TMTPro18x_K_F6 126.71 97.174 37335 26883 32703 39506 37324 40471 36091 42959 48931 38036 31298 28311 43961 33257 34988 51734 42619 34593 34462 24724 33713 38855 38400 40894 36864 43560 48422 38433 33470 29408 44031 35121 36247 50681 40649 33068 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116350000 30420 3253 28584 57088;57089 46109 46109 1 9606 Homo sapiens -0.009739086204490377 WFEENASQSTVK Unmodified 1424.6572 0.65720872 2621 B4DY09;Q53FG3;F4ZW62;Q12905;F4ZW63 ILF2 Interleukin enhancer-binding factor 2 yes no 0 0 0 4.5 0.5 1 1 53.061 53.133 2 1.0881E-31 15105 20230619_1885_Aki_TMTPro18x_K_F5 286.86 270.48 107730 77887 104780 109040 103800 116800 120280 117830 127090 138480 137990 138110 146350 126030 117980 147420 147990 143850 99519 71592 106700 107650 108350 117510 120560 120860 129590 138810 141410 139820 147780 131530 122280 147530 141280 136680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129880000 30421 2621 28585 57090;57091 46110;46111 46111 2 9606 Homo sapiens -0.03813359341256728 WFLTCINQPQFR Unmodified 1608.7871 0.78711746 3510 Q53YD7;P26641;P26641-2 EEF1G Elongation factor 1-gamma yes no 0 0 0 7 0.816 1 1 1 62.983 63.019 3 1.1614999999999999E-40 19161 20230619_1887_Aki_TMTPro18x_K_F7 247.31 220.8 312780 266350 295680 340950 285680 290010 295030 303580 286220 372530 317780 273900 361800 338150 287630 399730 368620 373670 289160 244420 301840 337500 297550 297540 296860 311080 293920 369710 326160 284940 364610 349910 298880 398920 351950 355170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 6607299999.999999 30422 3510 28586 57092;57093;57094 46112;46113 46113 2 9606 Homo sapiens 0.00707538456867951 WFNGQPIHAELSPVTDFR Unmodified 2113.0381 0.038123426 3777 Q01081;B5BU08;Q01081-2;Q7Z780;Q01081-4 U2AF1 Splicing factor U2AF 35 kDa subunit yes no 0 0 0 4.5 3.5 1 1 60.677 60.693 3 1.235E-13 18084 20230619_1888_Aki_TMTPro18x_K_F8 148.44 131.76 86865 58178 89763 98540 88494 98921 90962 90487 110440 98887 108440 100340 121290 87024 111510 123340 121390 126850 80253 53621 90971 96132 92114 99751 92204 93278 111310 99563 111870 101430 122810 92215 114170 123510 116090 120430 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 186670000 30423 3777 28587 57095;57096 46114;46115;46116 46116 3 9606 Homo sapiens 0.026125889124159585 WFTSQVIR Unmodified 1035.5502 0.55016488 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 5 0 1 55.981 56.045 2 0.0025147 16294 20230619_1885_Aki_TMTPro18x_K_F5 125.5 99.281 168090 165200 156530 150470 165890 231450 178880 189640 257650 37158 29611 31452 34761 27940 97931 38854 41457 31038 155530 151070 160140 154360 172480 226870 181890 192480 248200 46009 41483 32209 38380 29514 95021 38624 40139 29601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79511000 30424 3881 28588 57097 46117 46117 1 9606 Homo sapiens 0.033811800256899005 WFVLDAETR Unmodified 1135.5662 0.56620887 4548 Q9HC35;B5MBZ0;Q9HC35-2 EML4 Echinoderm microtubule-associated protein-like 4 yes no 0 0 0 5.5 0.5 1 1 61.597 61.648 2 0.0053082 18841 20230619_1886_Aki_TMTPro18x_K_F6 93.649 68.09 420540 350000 375740 401860 431910 575010 455820 439890 690280 366290 330770 313110 337160 293520 370900 383600 355830 363130 388560 320870 386560 403780 446180 564960 465050 456700 674650 373390 356510 319820 345740 308200 375810 382860 340660 345100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159460000 30425 4548 28589 57098;57099 46118 46118 1 9606 Homo sapiens 0.0038484147191866214 WFVPWGPNHCDK Unmodified 1541.6874 0.68740341 2935 Q7Z430;E9PQK1;E9PM62;Q8N2N3;Q96IV8;Q5T9L3;Q5T9L3-2 WLS;GPR177 Protein wntless homolog yes no 0 0 0 3 0 1 58.082 58.112 3 4.949E-05 17673 20230619_1882_Aki_TMTPro18x_K_F3 117.79 87.734 45829 37734 47587 40575 41119 55327 56400 57753 66885 44492 42201 46838 45800 42340 52692 55484 58668 55000 42392 34575 48076 40977 43713 54860 56293 58453 66488 45784 44675 47310 47008 44502 53803 55509 56050 52257 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35285000 30426 2935 28590 57100 46119 46119 1 9606 Homo sapiens -0.061772791570319896 WFVTCVR Unmodified 966.47456 0.47455709 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A1U9X9C1;A0A140T954 VARS Valine--tRNA ligase yes no 0 0 0 5 0.816 1 1 1 55.147 55.198 2 0.015441 15908 20230619_1885_Aki_TMTPro18x_K_F5 111.28 95.839 369920 303890 342180 348140 294820 344280 369900 378020 363700 409410 343470 289310 391300 324370 360450 438100 386170 357720 341850 278610 349250 348080 312110 349240 368560 384600 370450 408330 355160 300660 396360 339510 368920 433700 369040 340720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 382520000 30427 725 28591 57101;57102;57103 46120 46120 1 9606 Homo sapiens -0.010021204262102401 WGAQHAGAR Unmodified 952.46275 0.46274685 3100 I3L0A0;F8WBY2;F8W924;A5PLL7-2;A5PLL7 TMEM189-UBE2V1;TMEM189 Transmembrane protein 189 yes no 0 0 0 8 0 1 28.89 28.916 3 0.0022059 5267 20230619_1888_Aki_TMTPro18x_K_F8 72.038 33.22 25706 17186 26439 27762 33614 36554 29728 31874 43206 29834 31966 28508 29853 25887 27670 27700 36312 32937 23748 15830 26911 27264 34262 36172 30611 32818 42766 30254 33203 28922 30450 26896 28649 28101 34636 31241 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6766300 30428 3100 28592 57104 46121 46121 1 9606 Homo sapiens -0.015386011251962373 WGDAGAEYVVESTGVFTTMEK Unmodified 2276.0307 0.030714366 3382 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q0QET7;B4DRV9 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 5.42 1.19 1 1 1 9 8 4 69.656 69.698 3;4 4.4421E-45 20171 20230619_1883_Aki_TMTPro18x_K_F4 245.74 219.92 466300 312140 394480 506980 363810 401390 455490 380490 489140 454540 490480 527530 510150 468930 473760 499290 471300 574090 430110 287490 406810 494090 382800 412670 454640 392570 496280 457590 504110 529970 518450 487070 482410 505400 451670 544070 25 25 26 27 26 23 25 25 27 25 26 26 27 27 27 28 27 26 2897900000 30429 3382 28593 57105;57106;57107;57108;57109;57110;57111;57112;57113;57114;57115;57116;57117;57118;57119;57120;57121;57122;57123;57124;57125;57126;57127;57128 46122;46123;46124;46125;46126;46127;46128;46129;46130;46131;46132;46133;46134;46135;46136;46137;46138;46139;46140;46141;46142;46143;46144;46145;46146;46147;46148;46149;46150;46151 46123 30 9606 Homo sapiens -0.05625976260853349 WGDAGAEYVVESTGVFTTMEK Oxidation (M) 2292.0256 0.025628988 3382 V9HVZ4;P04406;Q2TSD0;P04406-2;E7EUT5;Q0QET7;B4DRV9 HEL-S-162eP;GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 0 1 0 5.1 1.02 1 1 1 10 8 69.788 69.834 3 6.5586E-13 19530 20230619_1885_Aki_TMTPro18x_K_F5 144.72 133.26 332530 237890 364670 409650 349760 379650 445280 271310 407690 355790 449030 454180 432730 411580 363200 392670 452780 449280 307460 219150 367620 398490 366230 383220 441640 287510 418480 357940 457860 454840 438940 424470 375440 397890 432280 426100 17 13 16 17 15 17 17 17 17 14 18 17 17 16 17 18 17 18 7656399999.999999 30430 3382 28593 57129;57130;57131;57132;57133;57134;57135;57136;57137;57138;57139;57140;57141;57142;57143;57144;57145;57146;57147;57148;57149 46152;46153;46154;46155;46156;46157;46158;46159;46160;46161;46162;46163;46164;46165;46166;46167;46168;46169;46170;46171;46172 46153 1993 21 9606 Homo sapiens -0.06870280123439443 WGDEHIPGSPYR Unmodified 1412.6473 0.64731274 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 FLNA;FLJ00119 Filamin-A yes no 0 0 0 5 0.816 1 1 1 46.188 46.256 3 1.8618E-05 12160 20230619_1885_Aki_TMTPro18x_K_F5 116.24 100.7 101410 83481 93065 95757 119990 144490 121980 129390 149690 117790 133760 142280 136850 117240 144920 124340 143540 139770 93707 76536 95682 96347 122710 142030 123710 132850 150190 120470 138220 142450 139960 122140 147030 125780 137320 132600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 752790000 30431 3484 28594 57150;57151;57152 46173 46173 1 9606 Homo sapiens -0.04250502555964886 WGDIEFPPPFGR Unmodified 1416.6826 0.68263561 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 4.5 3.5 1 1 64.102 64.113 2 5.2005E-05 19507 20230619_1888_Aki_TMTPro18x_K_F8 159.79 159.79 235420 188130 220160 210440 151170 193830 184030 203970 218610 299140 293550 294300 330750 280240 275510 359540 293680 305430 217540 172460 223800 210610 163670 197520 184990 210180 224110 296930 299240 298570 333710 293660 282610 356780 280900 290630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 637550000 30432 161 28595 57153;57154 46174;46175 46175 2 9606 Homo sapiens -0.009038400281724535 WGDPVTR Unmodified 829.40825 0.40825167 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;Q96D47;D3DXJ4 NSF Vesicle-fusing ATPase yes no 0 0 0 5 0.816 1 1 1 42.954 43.027 2 0.06574 10750 20230619_1885_Aki_TMTPro18x_K_F5 79.116 46.646 149430 123910 130520 150540 144760 166080 169840 162530 195420 172140 170480 168350 172800 146800 178180 183230 191250 184520 138040 113660 134520 150040 150020 166670 170530 166560 196590 173380 176220 170370 176570 154080 181840 183610 182810 175270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199400000 30433 1435 28596 57155;57156;57157 46176 46176 1 9606 Homo sapiens -0.013276129966129702 WGDRDSEGTWR Unmodified 1363.5905 0.59052614 3152 J9R021;Q14152;Q24JU4;Q14152-2 eIF3a;EIF3A Eukaryotic translation initiation factor 3 subunit A yes no 0 0 1 3.5 0.5 1 1 40.989 41.04 3 0.0027425 10055 20230619_1882_Aki_TMTPro18x_K_F3 62.088 49.321 108280 87702 104920 100360 125560 124580 126070 137230 136600 132960 128660 115910 139610 101420 130810 148930 142310 135340 100090 80409 107130 100700 128690 124470 127440 139110 138310 134050 132780 118060 141610 107690 133900 148070 136000 128720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205970000 30434 3152 28597 57158;57159 46177 46177 1 9606 Homo sapiens -0.07672550112488352 WGEEEAELNK Unmodified 1203.5408 0.54078198 2568 B4DPV7;P49589-3;A8K067;B4DKY1;A0A024RCG3;P49589-2;P49589;A8MVQ3;B4DI19;Q53HG6 CARS Cysteine--tRNA ligase, cytoplasmic yes no 0 0 0 2 0 1 51.173 51.218 3 0.00021734 14975 20230619_1881_Aki_TMTPro18x_K_F2 117.53 73.891 51641 46846 52617 57403 50254 63105 64778 62918 68805 68636 73143 77230 76429 61558 74262 82494 67413 70725 47791 42962 53382 57181 52823 63356 64597 64451 70038 69309 75025 77491 77758 65109 75224 81887 64590 67287 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102670000 30435 2568 28598 57160 46178 46178 1 9606 Homo sapiens -0.05284677841154917 WGELEGDTYDR Unmodified 1339.5681 0.56805936 2122 B3KUM0;A8K8I8;Q96CB9-4;Q96CB9;Q96CB9-3 NSUN4 5-methylcytosine rRNA methyltransferase NSUN4 yes no 0 0 0 1.5 0.5 1 1 52.117 52.136 2 7.4889E-17 15250 20230619_1880_Aki_TMTPro18x_K_F1 232.72 216.15 72946 56457 63672 71910 70932 86352 82436 90341 92079 86014 97533 99736 103260 93795 96047 114620 109630 114980 67357 51826 65630 71539 73501 86279 82764 91865 93451 87581 100080 100490 104920 98013 98649 114820 104800 109180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77025000 30436 2122 28599 57161;57162 46179;46180 46179 2 9606 Homo sapiens -0.08814194300748568 WGGVEMHNK Oxidation (M) 1072.476 0.47601365 2017 Q68E10;E9PB90;A8K2U2;P52789;Q53QX9 DKFZp686M1669;HK2 Hexokinase;Hexokinase-2 yes no 0 1 0 6.5 0.5 1 1 38.288 38.36 3 0.020673 8616 20230619_1887_Aki_TMTPro18x_K_F7 59.8 37.602 44537 30905 39291 43954 49708 59657 50442 45003 58625 54304 64211 63052 58082 51169 56214 60665 64204 59954 41103 28417 40544 43490 50887 58772 51054 47249 59459 54672 65340 63216 59400 53659 57659 60764 61323 56967 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81675000 30437 2017 28600 57163;57164 46181 46181 1265 1 9606 Homo sapiens -0.057325311281374525 WGLGGTCVNVGCIPK Unmodified 1616.7803 0.78031752 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7;E9PKD3;A0A0B4J225;E9PIZ5;E9PKI4;E9PLT3;A0A182DWF3;Q59ET7;D3YTF8;A0A182DWF2;Q17RE6;B3KUQ5;Q9NNW7-2;Q9NNW7;A0A096LPK7;A0A096LPD9;Q6M1B7;A4FTY4;E7EWK1 TXNRD1;TXNRD2;DKFZp781E0833 Thioredoxin reductase 1, cytoplasmic;Thioredoxin reductase 2, mitochondrial yes no 0 0 0 3.67 0.471 1 2 60.759 60.771 2;3 5.1352E-10 18643 20230619_1883_Aki_TMTPro18x_K_F4 167.12 143.89 64079 44937 59966 63123 57778 73585 63621 62192 82267 76502 72220 71611 78630 62267 70516 78745 74129 85287 59168 41312 61253 62366 60464 73314 64388 64706 82364 76428 74842 72599 79634 65453 72097 79204 70968 80895 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 893260000 30438 682 28601 57165;57166;57167 46182;46183 46183 2 9606 Homo sapiens -0.00340142485947581 WGPGSSVGSLQALSSSQR Unmodified 1802.8911 0.89112484 2830 D3DVC4;P48681;Q2YDX4;Q9H6U9 NES Nestin yes no 0 0 0 4 0 1 55.944 55.952 2 8.5625E-07 16630 20230619_1883_Aki_TMTPro18x_K_F4 145.43 117.95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30439 2830 28602 57168 46184 46184 1 9606 Homo sapiens 0.021794920274942342 WGQIVLK Unmodified 842.50142 0.50142377 4514 Q9H4A4;A6NKB8;Q7RU04 RNPEP Aminopeptidase B yes no 0 0 0 4 0 1 58.49 58.493 3 0.02988 17692 20230619_1883_Aki_TMTPro18x_K_F4 69.383 13.667 69359 59122 65522 66289 52028 69671 63021 62944 68230 81779 79552 76231 82882 72209 78219 86303 83672 91410 64122 54185 66690 66422 55513 70033 63111 65277 69732 81456 81218 77512 84271 75376 79969 86762 80058 86739 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41328000 30440 4514 28603 57169 46185 46185 1 9606 Homo sapiens 0.07387311456614043 WGRDDIENIAR Unmodified 1343.6582 0.65821178 2629 B7ZAX9;B4DZC0;O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 0 0 1 4 0 1 46.3 46.343 3 5.0778E-05 12312 20230619_1883_Aki_TMTPro18x_K_F4 135.1 106.82 160460 130500 154170 158520 152910 173730 166070 166460 193330 182340 183420 176190 194070 148670 161340 206300 188530 186570 148320 119710 157140 158010 159370 174350 167560 170970 195030 183260 189040 178290 196090 157360 166380 205150 180100 177420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 211090000 30441 2629 28604 57170 46186 46186 1 9606 Homo sapiens 0.00012899818329970003 WGSNELPAEEGK Unmodified 1315.6044 0.60444487 1076 P16615-5;P16615-2;A0A0S2Z3L2;P16615-3;P16615;P16615-4 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes no 0 0 0 3 0 1 50.449 50.524 3 0.032874 14351 20230619_1882_Aki_TMTPro18x_K_F3 50.222 32.786 243380 172890 227660 198930 147800 182400 197810 199620 221580 157160 159560 159920 182720 150520 179390 199870 184960 198070 224740 158600 231190 198710 161400 186090 197400 201670 221700 161280 167700 162050 185600 158210 182900 199880 177000 188100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133550000 30442 1076 28605 57171 46187 46187 1 9606 Homo sapiens -0.04073317404049703 WGTDEAQFIYILGNR Unmodified 1781.8737 0.87368386 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;B7Z582;A0A0S2Z377 ANXA6 Annexin A6;Annexin no no 0 0 0 4.5 3.5 1 1 64.157 64.167 3 2.1780999999999997E-52 19606 20230619_1888_Aki_TMTPro18x_K_F8 237.41 222.98 66069 41870 58129 66348 55435 62440 51859 56590 73596 66463 65755 81639 89489 78201 83508 86316 88534 111800 60946 38566 59704 64898 57774 63274 53202 58502 73459 67136 68991 82039 90319 81237 85318 88019 84821 105830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 279450000 30443 1062;1064 28606 57172;57173 46188;46189 46189 2 9606 Homo sapiens 0.014021964924950225 WGTDEEK Unmodified 863.36611 0.36611208 3416 V9HWE0;P08758;D6RBL5;D6RBE9 HEL-S-7;ANXA5 Annexin;Annexin A5 yes no 0 0 0 2 0.816 1 1 1 43.546 43.597 2 0.0085906 11499 20230619_1881_Aki_TMTPro18x_K_F2 127.12 64.403 200770 124540 262030 283330 666990 700070 412410 455260 471770 331800 537040 589140 525470 463920 495650 230820 617480 554550 185830 115360 267300 277910 653550 670290 432340 478300 479460 350170 547790 581610 535380 470590 509690 254770 589190 523520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 342390000 30444 3416 28607 57174;57175;57176 46190;46191 46191 2 9606 Homo sapiens -0.07103633195652037 WGTIEVENTTHCEFAYLR Unmodified 2225.0212 0.021152733 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;A0A0S2Z5W9;Q9UHD8-4;Q9UHD8-8;Q9UHD8-9;A2VCQ5 SEPT9;MAFK Septin-9 yes no 0 0 0 5.5 0.5 1 1 58.694 58.755 3 7.0557E-60 17597 20230619_1886_Aki_TMTPro18x_K_F6 304.8 287.43 104880 84208 101530 109810 80339 98448 107280 100390 119180 127790 109540 128340 139590 120400 121640 151790 128750 145100 96946 77309 103160 108640 85934 100440 106990 103210 120460 127690 114300 129950 140680 126110 124580 151570 123230 137830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166080000 30445 541 28608 57177;57178 46192;46193 46193 2 9606 Homo sapiens -0.04235699755690803 WGTLTDCVVMR Oxidation (M) 1352.6217 0.62169161 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;P51991-2;B4DDB6;B4E3E6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 1 0 4.5 3.5 1 1 54.686 54.719 2;3 9.9876E-05 16274 20230619_1880_Aki_TMTPro18x_K_F1 117.25 100.31 203430 161630 197470 231040 216870 233950 241100 241010 248510 255410 259440 284060 291210 245070 270940 301700 289380 334040 188020 148540 201600 227570 224300 236460 241950 246150 253300 258170 267270 285740 295230 257140 277070 303970 277010 316760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1143500000 30446 1469;2450 28609 57179;57180 46194;46195 46194 975 2 9606 Homo sapiens -0.04051436394274788 WGTLTDCVVMR Unmodified 1336.6268 0.62677699 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;P51991-2;B4DDB6;B4E3E6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 3.67 3.09 1 1 1 58.825 58.832 2 8.8579E-12 18111 20230619_1881_Aki_TMTPro18x_K_F2 234.81 196 539180 414390 484730 588810 409680 633770 583630 581370 669420 678450 620580 687760 745430 637360 652500 750360 707020 829540 497960 380870 496730 580550 437770 635600 581010 600210 675420 680820 644960 695860 752490 665260 668720 756350 676800 786620 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 587660000 30447 1469;2450 28609 57181;57182;57183 46196;46197;46198;46199 46197 4 9606 Homo sapiens -0.028071325316432194 WGTLTDCVVMRDPQTK Oxidation (M) 1921.9026 0.9026175 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;P51991-2;B4DDB6;B4E3E6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 1 1 4.5 3.5 1 1 52.113 52.152 3 0.0010642 15214 20230619_1880_Aki_TMTPro18x_K_F1 73.802 64.618 375850 388390 387650 397010 452390 394970 422370 459120 383630 448060 466400 416110 461290 378690 466960 512850 445350 445120 348200 355440 393690 400550 462920 401520 426710 464160 396730 452150 474210 423010 471050 398950 473810 509300 426320 423490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 623200000 30448 1469;2450 28610 57184;57185 46200;46201 46200 975 2 9606 Homo sapiens -0.021457702651105137 WGTLTDCVVMRDPQTK Unmodified 1905.9077 0.90770288 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V402;A0A7I2V4J6;A0A7I2V4G0;P51991-2;B4DDB6;B4E3E6 HNRNPA3;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 1 1.5 0.5 1 1 55.528 55.538 3 3.0573E-14 16622 20230619_1880_Aki_TMTPro18x_K_F1 170.79 155.4 798630 758690 755330 706880 678860 724770 786200 840680 686240 933370 806910 744220 949560 729690 938090 1054600 921690 850170 738880 694000 769390 719340 713570 734840 784020 852910 711070 931850 828390 764190 963450 770610 953830 1042700 881530 809930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1729399999.9999998 30449 1469;2450 28610 57186;57187 46202;46203 46202 2 9606 Homo sapiens -0.009014664024789454 WGVPIEK Unmodified 827.45414 0.45413923 2724 P11387;B9EG90;A0A7P0T852;Q9BVT2 TOP1 DNA topoisomerase 1 yes no 0 0 0 8 0 1 54.688 54.754 2 0.022167 15601 20230619_1888_Aki_TMTPro18x_K_F8 97.602 36.92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30450 2724 28611 57188 46204 46204 1 9606 Homo sapiens 0.03351032185616987 WGWPSDNR Unmodified 1016.4464 0.44642809 4432 Q9BTL3;A0A3B3IU46 FAM103A1 RNMT-activating mini protein yes no 0 0 0 8 0 1 51.774 51.851 2 0.010237 14338 20230619_1888_Aki_TMTPro18x_K_F8 99.375 77.868 77900 74890 85928 76974 87322 84595 89273 102040 108760 90321 75609 67966 94709 78225 86134 85726 88905 98399 72172 68556 86572 77758 90552 85427 90534 102650 108390 91256 79930 70396 95647 80818 87888 86736 85102 93291 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24603000 30451 4432 28612 57189 46205 46205 1 9606 Homo sapiens -0.061137270819585865 WHEAADTK Unmodified 956.43519 0.4351947 3880;2441 B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 no no 0 0 0 3.5 0.5 1 1 36.392 36.442 3 2.4319E-05 8090 20230619_1883_Aki_TMTPro18x_K_F4 178.94 172.28 407680 96465 389910 436680 416960 289140 374660 404480 431710 442780 734630 760490 622210 547130 463700 340690 626080 695390 375160 91694 397960 410490 428570 306020 382460 406610 448150 454760 734370 749760 631030 560720 482580 366020 597940 656470 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 572580000 30452 2441;3880 28613 57190;57191 46206;46207 46207 2 9606 Homo sapiens -0.04476549176115441 WHFYDTVK Unmodified 1094.5185 0.5185304 21 A0A024QZ30;P31040;D6RFM5;Q0QF12;B4DYN5;A0A494C1T6 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 4.5 3.5 1 1 51.07 51.109 3 0.0060855 14824 20230619_1880_Aki_TMTPro18x_K_F1 87.639 49.553 349820 254940 303010 334300 277000 341420 377820 358240 425850 254290 278980 238890 224000 226170 380810 255930 306020 254400 322890 234160 311590 331170 292900 344920 376420 362140 424520 262400 290810 243050 238080 235160 379630 257050 293170 241840 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 185530000 30453 21 28614 57192;57193 46208;46209 46208 2 9606 Homo sapiens -0.024948127282414134 WHIDTIMR Unmodified 1070.5331 0.5331346 1171 O43747-2;O43747;B3KXW5;A0A140VJE7;Q8IY97;B4DS96 AP1G1 AP-1 complex subunit gamma-1 yes no 0 0 0 1 0 1 49.298 49.298 3 0.00033536 14074 20230619_1880_Aki_TMTPro18x_K_F1 147.04 122.14 30592 14722 28324 27920 25188 24077 31188 31247 34665 34207 31762 27996 37591 28881 32673 30609 25535 31441 28198 13615 28907 27054 26548 24792 31211 31503 35015 34220 32955 28737 37912 29879 32907 30789 24541 29832 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30330000 30454 1171 28615 57194 46210 46210 1 9606 Homo sapiens 0.0006893614827276906 WHNQETGEQIAIK Unmodified 1552.7634 0.76340513 2043 E5RGW5;Q32ND9;G3V105;A8K4I7;O14920-3;O14920;J3KNS5 IKBKB Inhibitor of nuclear factor kappa-B kinase subunit beta yes no 0 0 0 5 0 1 44.992 45.07 3 8.6518E-05 11624 20230619_1885_Aki_TMTPro18x_K_F5 104.24 89.683 41801 31814 39532 41083 36960 43223 45110 41028 40135 39216 51970 48270 52148 49229 49724 57334 50053 51325 38618 29211 40323 40755 38815 43485 44868 42042 41616 40014 52757 48684 53126 51137 50667 57134 47896 48808 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43025000 30455 2043 28616 57195 46211 46211 1 9606 Homo sapiens 0.009133962241094196 WHPEVCHHCPDVPILLVGTK Unmodified 2393.1773 0.17727622 3768 Q6ICQ8;P84095 ARHG;RHOG Rho-related GTP-binding protein RhoG yes no 0 0 0 1 0 1 52.378 52.378 5 6.2277E-05 15419 20230619_1880_Aki_TMTPro18x_K_F1 87.85 77.307 13336 10103 10402 13377 11278 13987 12039 13876 16447 16679 13548 14832 15600 13347 14678 15038 15107 17560 12303 9278.7 10843 13243 11693 14089 12233 14252 16403 16650 14136 15078 15815 13913 14968 15225 14467 16642 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38789000 30456 3768 28617 57196 46212 46212 1 9606 Homo sapiens 0.03641467213901706 WHPGAHVGVGK Unmodified 1143.5938 0.59376103 4641 Q9P0M9;D6RAN8 MRPL27 39S ribosomal protein L27, mitochondrial yes no 0 0 0 3 0 1 37.988 38.042 4 0.029109 8786 20230619_1882_Aki_TMTPro18x_K_F3 61.161 52.389 173480 77928 134710 165030 187790 167530 190330 186630 236770 227240 236660 216050 252540 189250 165510 215780 197570 230620 159660 72232 141010 159370 190770 169610 193120 190420 238600 227150 243230 218940 252910 197670 171890 217100 188950 218770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223010000 30457 4641 28618 57197 46213 46213 1 9606 Homo sapiens 0.02770789522855921 WHPYTNTAR Unmodified 1144.5414 0.5413911 3027 H0Y714;Q96G21;E7ENR5 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 yes no 0 0 0 2.5 0.5 1 1 35.09 35.147 3 0.00010435 7718 20230619_1881_Aki_TMTPro18x_K_F2 121.85 108.89 55489 36475 57773 56553 65038 74159 67295 74306 70800 59496 68827 64425 67850 56698 63711 54473 77151 66468 51264 33582 58607 55680 67045 73611 67854 75465 71812 61078 70643 64930 69087 58647 65541 55485 73613 63044 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72852000 30458 3027 28619 57198;57199 46214 46214 1 9606 Homo sapiens -0.025097936107840724 WIDETPPVDQPSR Unmodified 1538.7365 0.73652168 1720 Q15257;Q15257-2;Q15257-3;A0A804CD06;A6PVN5;B4DZF8;F6WIT2;Q5T949;A6PVN6;A6PVN8;A6PVN7;C9IZ76 PPP2R4 Serine/threonine-protein phosphatase 2A activator yes no 0 0 0 2.5 0.5 1 1 51.573 51.628 2 7.196999999999999E-21 14842 20230619_1882_Aki_TMTPro18x_K_F3 257.8 207.76 194400 156160 205420 218580 185150 244900 230490 231180 242100 278580 272830 261100 294980 235700 302610 278090 270520 299440 179820 143480 207600 215890 195390 245170 230210 238360 247400 278410 279450 265000 300540 246360 305680 280050 259340 284080 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 95789000 30459 1720 28620 57200;57201 46215;46216;46217 46215 3 9606 Homo sapiens -0.011297123870917858 WIDFDNDYK Unmodified 1214.5244 0.52440364 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;A0A804HK69;A0A804HKU1;A0A804HIG2 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 5 0 1 61.44 61.488 3 3.1459E-05 18538 20230619_1885_Aki_TMTPro18x_K_F5 135.71 105.46 164590 126090 147910 145570 116920 152900 145230 157470 180490 197410 194730 222310 222530 200280 167990 250240 236230 252890 152000 115640 151180 145580 124940 154140 145990 161590 182550 198090 200460 223780 223780 209900 176010 250560 225480 240100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 172010000 30460 1736 28621 57202 46218 46218 1 9606 Homo sapiens -0.07427759007259738 WIDLTMEDIR Oxidation (M) 1306.6227 0.62273747 3601 P48739;P48739-2;P48739-3;B2R7P6 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 1 0 3 0 1 61.065 61.094 2 0.0077664 18857 20230619_1882_Aki_TMTPro18x_K_F3 78.264 48.888 36502 29921 31657 33982 38918 35493 38677 39935 56497 35293 36827 35687 38828 32505 39680 45260 40939 46938 33715 27430 32676 34020 39829 35904 39542 40361 55699 35970 38793 36138 39615 34317 40438 45349 39200 44542 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34801000 30461 3601 28622 57203 46219 46219 2271 1 9606 Homo sapiens -0.018308987537238863 WIDLTMEDIRR Unmodified 1446.7289 0.72893388 3601 P48739;P48739-2;P48739-3;B2R7P6 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 0 1 7.5 0.5 1 1 60.001 60.042 3 5.1902E-17 17803 20230619_1887_Aki_TMTPro18x_K_F7 221.32 197.02 92946 84255 91138 80436 62357 73252 86104 90987 88768 106640 92805 89308 102110 89186 96293 122620 97740 104140 85989 77098 92235 81574 67710 75078 85595 92118 90545 106360 95429 91495 103660 93751 98251 121570 93547 99083 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54294000 30462 3601 28623 57204;57205 46220 46220 1 9606 Homo sapiens 0.02343856811603473 WIDNPTVDDR Unmodified 1229.5677 0.56766543 51 A0A384NYN5;A0A024QZN4;V9HWK2;P18206-2;P18206;B3KXA2;B4E3Q9 VCL;HEL114 Vinculin yes no 0 0 0 2 0 1 49.717 49.776 2 3.6768E-16 14338 20230619_1881_Aki_TMTPro18x_K_F2 213.03 170.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30463 51 28624 57206 46221 46221 1 9606 Homo sapiens -0.03793569229969762 WIEAGPVVLK Unmodified 1110.6437 0.64373091 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-5;Q13308-3;Q59FV9;Q86X91;B7Z471;F8WDG7 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 1 0 1 61.762 61.762 2 3.7421E-05 19205 20230619_1880_Aki_TMTPro18x_K_F1 151.44 117.36 54692 50186 50019 48880 45636 61378 56007 58208 62672 75324 76040 82870 82130 69083 76416 78679 71221 91727 50574 45928 51143 49676 48130 61047 56102 60120 64060 75408 77706 83275 83331 72247 77539 79636 68336 86909 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30768000 30464 3847 28625 57207 46222 46222 1 9606 Homo sapiens 0.09283479408145467 WIFVGGK Unmodified 805.44866 0.44865992 3263 O43681 ASNA1 ATPase ASNA1 yes yes 0 0 0 5 0 1 60.581 60.631 2 0.0063147 18156 20230619_1885_Aki_TMTPro18x_K_F5 143.22 101.57 420170 358130 353700 396480 350990 416880 355150 390520 427300 484190 479840 482850 534720 419120 463740 535430 521930 554570 388110 328180 365020 397600 365430 419470 360340 403210 433720 484170 492220 488100 540390 440820 476430 537030 499040 526410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 255800000 30465 3263 28626 57208 46223 46223 1 9606 Homo sapiens 0.038153533938157125 WIGLDLSNGKPR Unmodified 1354.7357 0.73573382 3470 P17987;E7EQR6;F5H282 TCP1 T-complex protein 1 subunit alpha yes no 0 0 1 4.5 0.5 1 1 55.162 55.202 3 7.1988E-07 16300 20230619_1883_Aki_TMTPro18x_K_F4 150.29 122.96 236840 192720 245900 234400 238940 318950 250780 254730 294710 292570 278470 244470 287680 209460 317560 253770 235530 226740 219060 176790 248920 234400 249520 314490 253610 265580 297210 292250 286760 249200 294380 219740 317500 253040 226080 215680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96585000 30466 3470 28627 57209;57210 46224 46224 1 9606 Homo sapiens 0.07255537754485886 WINATDPSAR Unmodified 1129.5516 0.55162144 3409 P08243-2;P08243;P08243-3;B4DY32 ASNS Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 6.5 0.5 1 1 46.849 46.935 2 3.2381E-05 12158 20230619_1887_Aki_TMTPro18x_K_F7 154.05 127.09 381010 313240 337710 321780 326360 379440 319890 291010 401000 447260 467610 490840 445140 373830 514310 432910 454960 498700 351990 286900 346350 325180 340130 377470 325560 307700 406820 444960 475970 492030 458160 392710 518050 438050 436180 472810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199120000 30467 3409 28628 57211;57212 46225 46225 1 9606 Homo sapiens -0.007972306761985237 WISIMTER Unmodified 1034.5219 0.52190122 368 P07355;A0A024R5Z7;V9HW65;P07355-2;H0YMW4;H0YN42;H0YMD0;A6NMY6;H0YMU9;H0YL33;H0YM50;B3KRQ1;H0YN28;H0YNP5 ANXA2;HEL-S-270;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein yes no 0 0 0 3.5 2.69 1 1 1 1 60.057 60.077 2 3.9528E-07 18617 20230619_1881_Aki_TMTPro18x_K_F2 211.39 154.21 1272900 1010600 1117500 1130600 1084700 1461800 1228400 1266200 1406500 1489900 1458300 1539100 1537000 1379200 1607500 1496600 1576300 1689900 1175600 926440 1148000 1136600 1135800 1448100 1236200 1312600 1425600 1495300 1498200 1554200 1569900 1434200 1631000 1513300 1509300 1602600 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 2002999999.9999998 30468 368 28629 57213;57214;57215;57216 46226;46227;46228;46229;46230 46228 5 9606 Homo sapiens 0.006021140541179193 WISSGEYIQMSGR Unmodified 1512.7031 0.70311306 3579 P42285;A8K6I4;B4E3M6 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 0 0 1 0 1 56.564 56.564 2 0.00027071 17064 20230619_1880_Aki_TMTPro18x_K_F1 106.38 78.637 50021 45637 49918 52810 48311 58692 57112 59634 60369 53777 50332 47793 62364 48703 49883 64646 58902 52828 46286 41829 50720 52835 50580 58916 57185 60687 60922 54492 52620 48867 62658 51061 51521 64005 56228 50324 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22501000 30469 3579 28630 57217 46231 46231 1 9606 Homo sapiens -0.03273037430653858 WISSGEYIQMSGR Oxidation (M) 1528.698 0.69802768 3579 P42285;A8K6I4;B4E3M6 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 1 0 8 0 1 51.666 51.743 2 0.08355 14269 20230619_1888_Aki_TMTPro18x_K_F8 68.847 57.314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30470 3579 28630 57218 46232 46232 2251 1 9606 Homo sapiens -0.04517341293285426 WITPAFQIHK Unmodified 1239.6764 0.67642802 4690 Q9UNI6 DUSP12 Dual specificity protein phosphatase 12 yes yes 0 0 0 5 0 1 57.237 57.296 3 0.00026041 16806 20230619_1885_Aki_TMTPro18x_K_F5 115.18 84.97 64899 65811 57437 57342 71556 94736 73930 70562 102000 26251 21962 20669 28243 19609 32982 26865 25952 23505 60043 60158 59206 59136 73466 92397 75185 72559 98900 28911 26582 21250 28857 20668 33031 26712 24882 22370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19954000 30471 4690 28631 57219 46233 46233 1 9606 Homo sapiens 0.06617686530989886 WIVNLIR Unmodified 912.55452 0.55452197 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;A0A7I2V3I2;H0YBP5;A0A7I2V4G3;E5RGA2;A0A7I2V5P9;E5RHS5;H0YAW4 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 0 6.5 0.5 1 1 62.619 62.663 2 0.0077204 19010 20230619_1887_Aki_TMTPro18x_K_F7 132.8 74.226 648380 399350 534870 655630 508210 753740 656190 627670 877970 801560 650500 639920 871110 689550 657700 1016200 889740 860250 597740 368060 553400 641690 536160 750980 659580 654590 873100 796410 687500 659170 871980 727130 687320 1006100 848850 818830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 970700000 30472 1659 28632 57220;57221 46234;46235 46235 2 9606 Homo sapiens 0.09474689239277723 WIVPGGGMEPEEEPGGAAVR Unmodified 2036.9626 0.96257522 4352 Q96G61;Q8NFP7 NUDT11;NUDT10 Diphosphoinositol polyphosphate phosphohydrolase 3-beta;Diphosphoinositol polyphosphate phosphohydrolase 3-alpha yes no 0 0 0 3.5 0.5 1 1 58.536 58.553 3 5.156E-37 17831 20230619_1882_Aki_TMTPro18x_K_F3 178.51 161.84 15970 13505 15812 15851 18725 16342 15689 17388 19600 19087 23601 23013 21827 20044 24750 23562 25114 24995 14769 12383 16111 15829 19110 16527 16128 17734 19903 19317 23951 23094 22481 20952 25130 23707 24025 23725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27638000 30473 4352 28633 57222;57223 46236 46236 1 9606 Homo sapiens -0.014427563301296686 WIVPGGGMEPEEEPSVAAVR Oxidation (M) 2125.015 0.015004722 1322;3366 O95989;A0A1W2PQS6 NUDT3 Diphosphoinositol polyphosphate phosphohydrolase 1 no no 0 1 0 3 0 1 57.811 57.842 3 6.7797E-08 17528 20230619_1882_Aki_TMTPro18x_K_F3 103.66 95.484 23672 24384 24957 24943 25439 26127 24663 24846 32310 26676 26089 28498 30254 27970 29998 33574 30739 30528 21934 22316 25248 25176 26358 26321 25153 25524 32231 26935 27264 28835 30753 29150 30569 33471 29402 29028 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7847900 30474 3366;1322 28634 57224 46237 46237 828 1 9606 Homo sapiens -0.0025021798710440635 WIYSCNEK Unmodified 1098.4804 0.48043033 110 F5H8D7;A0A024R0S8;Q59HH7;P18887;B2RCY5;B4DTD3 XRCC1 DNA repair protein XRCC1 yes no 0 0 0 8 0 1 50.691 50.767 3 0.0012123 13860 20230619_1888_Aki_TMTPro18x_K_F8 104.44 85.657 41516 31204 35659 36355 42081 45853 44468 46214 47361 46562 47428 52370 52277 44612 49756 53823 53689 48381 38325 28622 36814 36429 43273 45658 44791 47181 48103 47208 48913 52633 53085 46745 50876 53630 51295 46030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54120000 30475 110 28635 57225 46238 46238 1 9606 Homo sapiens -0.06487066705221878 WKDSDEADLVLAK Unmodified 1488.746 0.74602373 1933 A4D177;Q13185 CBX3 Chromobox protein homolog 3 yes no 0 0 1 3.5 1.12 1 1 1 1 56.007 56.039 3 0.0010778 16679 20230619_1883_Aki_TMTPro18x_K_F4 88.101 57.273 267690 219370 259510 243760 186200 243420 264770 245010 235470 302790 304680 242790 308950 237940 273250 296990 271120 244430 247460 201060 263150 244330 201510 246210 261650 251780 244530 300960 309120 249240 313230 248820 278490 294530 259240 232820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1093100000 30476 1933 28636 57226;57227;57228;57229 46239;46240 46240 2 9606 Homo sapiens 0.021200558984219242 WKDTDEADLVLAK Unmodified 1502.7617 0.76167379 3587 V9HWG0;P45973 HEL25;CBX5 Chromobox protein homolog 5 yes no 0 0 1 6 0.816 1 1 1 56.569 56.634 3 0.00039971 16672 20230619_1886_Aki_TMTPro18x_K_F6 94.717 81.58 430380 328060 402690 403500 330590 403580 398110 394420 414770 501090 487820 467490 554900 434830 495430 509530 456810 462680 397580 301060 410300 401380 351240 407840 398270 406460 424980 499530 499890 475010 560980 453710 502780 508240 437480 439930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1280600000 30477 3587 28637 57230;57231;57232 46241;46242;46243 46242 3 9606 Homo sapiens 0.03040342415442865 WKEPPGEEPVRK Unmodified 1450.7569 0.75686319 4440 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 yes yes 0 0 2 7 0 1 41.629 41.7 4 0.028554 9969 20230619_1887_Aki_TMTPro18x_K_F7 62.528 39.643 51703 35529 52558 51791 50020 59047 54067 50533 61506 53208 61807 61491 61124 51668 55980 58648 68846 66659 47767 32680 53278 51046 52299 58936 54521 52305 62215 53905 63366 61722 62171 53999 57737 59266 65731 63236 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40653000 30478 4440 28638 57233 46244 46244 1 9606 Homo sapiens 0.04951503063352902 WKPPMIDNPSYQGIWKPR Oxidation (M) 2228.1201 0.12007892 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2 CANX Calnexin yes no 0 1 2 6 0 1 55.798 55.872 4 2.6951E-06 16481 20230619_1886_Aki_TMTPro18x_K_F6 99.044 74.45 74916 66080 81498 88922 76000 86585 88752 82988 90010 98041 112130 84752 87816 86814 96175 82177 80687 71637 69357 60665 82210 87875 79702 87637 88817 85461 92496 97873 112770 86769 90832 89180 96719 82142 77288 68186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218910000 30479 1700 28639 57234 46245 46245 1108 1 9606 Homo sapiens 0.05514367999876413 WKPPMIDNPSYQGIWKPR Unmodified 2212.1252 0.12516429 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;P27824-3;D6RGY2 CANX Calnexin yes no 0 0 2 6 0 1 57.849 57.918 4 3.7977E-06 17211 20230619_1886_Aki_TMTPro18x_K_F6 98.796 94.726 51484 40390 50109 49938 39459 49173 47396 59109 52282 56460 56797 57150 56870 42922 59177 55518 50369 46839 47583 37064 50857 49662 42092 49993 47541 59592 53187 57179 58081 57501 58094 45419 59628 55123 48254 44593 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 328430000 30480 1700 28639 57235 46246 46246 1 9606 Homo sapiens 0.06758671862507981 WKPSSGVPSTSDDSR Unmodified 1604.7431 0.74306362 121 G3V1V1;A0A024R106;F8VXY6;Q8TBF4 ZCRB1 Zinc finger CCHC-type and RNA-binding motif-containing protein 1 yes no 0 0 1 7 0 1 42.39 42.465 3 0.00037787 10267 20230619_1887_Aki_TMTPro18x_K_F7 91.1 81.3 57304 42469 50586 50760 51635 60171 58130 57419 64312 67069 69277 64182 78399 58719 60316 81034 73195 67269 52905 38967 51968 50717 53769 60065 58435 59097 65393 67175 71191 65152 78817 61949 62475 80242 69867 64060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53414000 30481 121 28640 57236 46247 46247 1 9606 Homo sapiens -0.035118192263780657 WKVPTYK Unmodified 920.51199 0.51198846 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 6 0 1 49.046 49.124 3 0.084701 13539 20230619_1886_Aki_TMTPro18x_K_F6 54.549 36.514 134740 110630 126100 142770 127210 127660 133990 134920 154140 144260 155720 127510 149730 110730 141010 121380 121050 99724 124530 101550 128910 141330 132160 130440 135370 137610 155920 144780 159240 129680 152430 115390 142330 120690 115870 95026 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115520000 30482 3758 28641 57237 46248 46248 1 9606 Homo sapiens 0.048552941110415304 WKYEKPDGSPVFIAFR Unmodified 1938.9992 0.99921872 3867 Q13740-2;F5GXJ9;Q13740;B3KNN9;B4DX43;Q13740-3 ALCAM CD166 antigen yes no 0 0 2 4 0 1 57.988 57.991 4 1.5239E-05 17479 20230619_1883_Aki_TMTPro18x_K_F4 105.5 88.479 155950 146050 159090 170540 214260 233120 243610 226750 288130 232790 166620 144830 210420 134860 194380 255580 172240 150180 144360 133860 162310 171060 218960 230840 245060 232150 286200 232390 178480 150880 212340 145940 197060 248800 164860 143840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 216920000 30483 3867 28642 57238 46249 46249 1 9606 Homo sapiens 0.06727908348671008 WLAIDANAR Unmodified 1028.5403 0.54032847 3904 Q14974;B2RBR9;J3QR48 KPNB1 Importin subunit beta-1 yes no 0 0 0 5.5 2.69 1 1 1 1 53.94 53.994 2 0.00013212 15999 20230619_1880_Aki_TMTPro18x_K_F1 150.4 108.95 738070 625580 684870 716430 618210 711300 701980 708190 778600 853510 835160 800710 902340 740380 824640 896480 883260 894070 682220 573470 699310 716220 650070 719740 705640 727620 791640 853070 856950 813330 914910 774190 843550 898060 844600 849180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2078299999.9999998 30484 3904 28643 57239;57240;57241;57242 46250;46251;46252 46250 3 9606 Homo sapiens 0.027199920203202055 WLAPDGLIFPDR Unmodified 1398.7296 0.7295858 1536 A0A3S6H812;Q99873-3;Q99873-2;A0A3S6H7X4;E9PKG1;A0A3Q8AM27;A0A3S6H7E9;Q99873;A0A3S6H7G3;A0A3Q8ATF5;Q5U8W9;A0A3Q8APW9;A0A3Q8B022;A0A3Q8APX7;A0A3S6H7Z6;A0A3Q8AIR8;B4DJ87;E9PIX6;A0A3S6H765;A0A3S6H8A6;E9PQ98;E9PNR9;H0YDE4 PRMT1;HRMT1L2 Protein arginine N-methyltransferase 1 yes no 0 0 0 7.5 0.5 1 1 63.873 63.899 2 1.9129E-06 19459 20230619_1888_Aki_TMTPro18x_K_F8 187.55 119.33 517900 447750 499960 470970 433290 499780 535540 514130 491370 675460 596620 598130 761200 543360 569200 769060 650020 655340 478920 410110 508230 474490 458060 503720 532930 528510 508360 671230 614310 608990 761810 574640 587740 762230 621190 623640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1792399999.9999998 30485 1536 28644 57243;57244 46253;46254 46254 2 9606 Homo sapiens 0.046170195229706223 WLCPLSGK Unmodified 959.48987 0.48987281 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1;Q7Z4Y3 SRRT Serrate RNA effector molecule homolog yes no 0 0 0 4 0 1 58.12 58.123 2 0.0027556 17550 20230619_1883_Aki_TMTPro18x_K_F4 138.55 74.002 265930 229600 255220 239970 253020 311890 309920 293660 324430 205350 167210 141330 210280 163050 186760 256660 227760 210990 245900 210280 260100 242610 264750 309480 309500 298860 323160 210580 180720 147480 212180 172500 192970 253620 217400 200950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103600000 30486 4464 28645 57245 46255 46255 1 9606 Homo sapiens 0.00850746370986144 WLDESDAEMELR Unmodified 1492.6504 0.65040879 3075 H3BS72;Q9P035;H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes no 0 0 0 1.5 0.5 1 1 59.82 59.826 2 0.048244 18551 20230619_1881_Aki_TMTPro18x_K_F2 64.439 44.135 53858 43899 50590 52244 56351 59019 57055 56221 64682 63348 63543 63117 70952 61118 65412 71568 73807 86654 49775 40263 51755 52174 58083 59118 57728 57818 65442 63645 65576 64032 71929 63694 67113 72570 70626 82098 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 121720000 30487 3075 28646 57246;57247 46256 46256 1 9606 Homo sapiens -0.07621040284152514 WLEASEEER Unmodified 1147.5146 0.51456723 2320 B2RDN4;Q14137;A8K3R2;B4DEN9;Q14137-2;Q4G0D9;Q6DKJ9 BOP1 Ribosome biogenesis protein BOP1 yes no 0 0 0 1 0 1 47.745 47.745 2 0.0054872 13404 20230619_1880_Aki_TMTPro18x_K_F1 108.81 82.424 128170 94538 105260 118200 151450 144110 144170 139280 169670 122950 110280 119340 135400 96000 134130 140090 121110 122970 118270 86784 109590 117750 153360 143700 146480 142180 168990 125100 117150 120540 137210 102190 135730 139100 116020 116970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 149070000 30488 2320 28647 57248 46257 46257 1 9606 Homo sapiens -0.05328947012617391 WLGEPIK Unmodified 841.46979 0.46978929 3222 O14744;O14744-2;B2RDD7;O14744-5;O14744-3;B4DV00;H0YJX6 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed;Protein arginine N-methyltransferase 5 yes no 0 0 0 7.5 0.5 1 1 55.781 55.842 2 0.017824 16098 20230619_1887_Aki_TMTPro18x_K_F7 108.09 46.249 323620 257970 297620 334290 323660 406900 343830 352230 397390 196030 183190 134350 166550 138410 287820 196050 193450 124590 298990 236820 305170 332160 335190 404470 347060 359420 392650 205030 197270 139700 176290 145650 284800 192420 185530 119350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 165440000 30489 3222 28648 57249;57250 46258;46259 46258 2 9606 Homo sapiens 0.04271318702660665 WLGPILGYDTD Unmodified 1248.6027 0.60265396 1636 A0A7P0TAV2;A0A6Q8PGK3;A0A7P0T9G7;B7ZLW8;Q99707;A0A7P0TAJ0;Q99707-2;Q6MZH4;B1ANE3 MTR;DKFZp686A22123 Methionine synthase yes no 0 0 0 5.5 1.12 1 1 1 1 67.15 67.18 2 0.0021421 21216 20230619_1886_Aki_TMTPro18x_K_F6 117.16 103.17 21826 13394 14945 14973 16742 13641 19903 19704 18527 20558 22619 20405 20673 21411 18794 24811 21916 22867 20098 12293 15776 14989 17304 14051 19844 19730 19120 20717 22915 20775 21098 22213 19351 24754 20945 21736 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 19667000 30490 1636 28649 57251;57252;57253;57254 46260;46261 46261 2 9606 Homo sapiens -0.011703264220159326 WLHEINQNCDDVCR Unmodified 1857.7887 0.78865038 3926 Q15286;F5H157;Q15286-2 RAB35 Ras-related protein Rab-35 yes no 0 0 0 4 0.816 1 1 1 46.547 46.614 3 1.8817E-12 12607 20230619_1882_Aki_TMTPro18x_K_F3 191.06 180.27 62455 50768 64155 66584 63024 68415 67985 75898 69892 91913 89807 79010 83316 73223 80748 92632 94895 98631 57761 46609 65024 65976 65660 69212 68378 77408 71985 91580 90853 80634 85137 76769 83004 93070 90684 93603 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 238220000 30491 3926 28650 57255;57256;57257 46262 46262 1 9606 Homo sapiens -0.10593240307298402 WLHGLESQIQSDDYGK Unmodified 1874.8799 0.87989145 2337;3778;3779 Q01082;B2ZZ89;A0A087WUZ3;D6W5C0;K9MS24;Q01082-2;Q01082-3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 6 0 1 58.694 58.759 3 5.6665E-15 17579 20230619_1886_Aki_TMTPro18x_K_F6 188.39 170.53 124640 93519 117890 127930 113510 126150 136070 139190 131360 157240 152730 157180 159210 134440 153140 182650 161490 180870 115140 85924 120320 126340 118840 127980 135800 141770 135070 157850 156040 158830 161980 141980 156460 182580 154570 171740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34343000 30492 2337;3778;3779 28651 57258 46263;46264 46263 2 9606 Homo sapiens -0.022553300666686482 WLHNEDQMAVEK Oxidation (M) 1514.6824 0.68237762 1232 A0A140VK56;P37837-2;P37837 TALDO1 Transaldolase yes no 0 1 0 3 0.816 1 1 1 43.88 43.945 3 2.9531E-05 11355 20230619_1882_Aki_TMTPro18x_K_F3 119.25 104.57 368820 174680 343170 403820 460470 445590 412770 433330 513470 505880 695230 834830 589950 561800 620950 556250 716460 833350 339940 162110 352780 389020 467440 446870 422220 445600 524330 517180 701120 822620 607310 588100 635820 574790 685390 788150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 524340000 30493 1232 28652 57259;57260;57261 46265;46266 46265 773 2 9606 Homo sapiens -0.05437627810329104 WLHNEDQMAVEK Unmodified 1498.6875 0.68746299 1232 A0A140VK56;P37837-2;P37837 TALDO1 Transaldolase yes no 0 0 0 4.5 0.5 1 1 48.035 48.093 3 6.1456E-07 13076 20230619_1883_Aki_TMTPro18x_K_F4 147.18 121.2 367780 197100 337410 339660 330930 373700 355810 357350 376090 453670 467520 428310 447580 335210 399780 388250 381320 408180 339110 181920 345180 331580 345040 374710 358140 368720 385970 452340 474200 432700 454700 351940 406290 390500 365210 387380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 701920000 30494 1232 28652 57262;57263 46267;46268 46267 2 9606 Homo sapiens -0.04193323947720273 WLITLNK Unmodified 886.52764 0.52763852 3393 P06730;P06730-2;Q32Q75;X5D7E3;D6RBW1;P06730-3;B7Z2T1;H0Y8J7 EIF4E Eukaryotic translation initiation factor 4E yes no 0 0 0 4.5 0.5 1 1 61.974 62.001 2 1.4176E-05 18795 20230619_1885_Aki_TMTPro18x_K_F5 196.36 54.807 652740 582310 592330 619170 548160 638630 640580 695990 739550 788940 422450 625100 717920 883520 283540 1292300 276420 762170 603450 533340 606260 622920 575860 645800 643640 709230 736590 787600 462180 651260 704680 922470 301500 1259400 267910 727750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 751810000 30495 3393 28653 57264;57265 46269 46269 1 9606 Homo sapiens 0.079835806280812 WLLAHCGRPQTECR Unmodified 1782.8406 0.84062637 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 1 4 0 1 39.644 39.687 4 0.0017139 9448 20230619_1883_Aki_TMTPro18x_K_F4 68.83 61.239 45851 37208 52852 50193 66664 65493 61241 60744 81010 58396 75089 64345 75557 56647 59850 64520 81232 72030 42448 34170 53291 49822 67953 64965 62665 62311 81087 59376 77239 64849 76320 59150 62335 65118 77452 68369 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21214000 30496 3758 28654 57266 46270 46270 1 9606 Homo sapiens -0.019480321028595426 WLLEGTPSSASEGDEDLRR Unmodified 2117.0025 0.0025257806 174 A0A024R207;B2RCL4;A0A024R1Y6;O75781-2;O75781;B7Z649 PALM Paralemmin-1 yes no 0 0 1 3.5 0.5 1 1 52.902 52.944 3 1.3907E-72 15496 20230619_1882_Aki_TMTPro18x_K_F3 326.05 308.19 124500 109170 122790 142770 109140 136000 137760 125120 150060 142740 147800 153290 158170 137950 141730 178740 168560 182530 115160 100190 124810 141290 115330 137740 137620 129140 152070 143670 152250 154670 160380 144950 146110 179060 161110 173270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 307440000 30497 174 28655 57267;57268 46271;46272 46271 2 9606 Homo sapiens -0.011295381259060377 WLLLTGISAQQNR Unmodified 1498.8256 0.82561145 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 7.5 0.5 1 1 63.071 63.099 2 1.8111E-07 19245 20230619_1887_Aki_TMTPro18x_K_F7 195.34 145.98 193970 159410 164760 144970 179340 230370 195750 166950 266350 56765 51586 50941 67700 50204 96398 58141 62431 70059 179140 145870 169950 148830 186020 225000 198360 172040 258100 63598 63815 52061 69978 52299 95430 59083 60114 66388 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 354380000 30498 826 28656 57269;57270 46273 46273 1 9606 Homo sapiens 0.09615167363062938 WLNENAVEK Unmodified 1101.5455 0.54547343 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 0 4.5 1.12 1 1 1 1 52.106 52.166 2 4.646E-05 14848 20230619_1886_Aki_TMTPro18x_K_F6 182.39 106.65 485720 389270 465920 494920 392850 489930 495200 445230 537230 692360 688240 733100 726290 542190 660180 796000 755300 762910 448920 357290 474100 491040 417060 494700 494820 464790 551600 687370 700990 735750 736410 579270 678490 793520 721800 724940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 527320000 30499 1439 28657 57271;57272;57273;57274 46274;46275 46275 2 9606 Homo sapiens -0.0012374890770843194 WLNYGGVIK Unmodified 1048.5706 0.57056597 1575 B2RBY4;A0A5F9ZHB6;P49642;Q53F98;F8VSB2 PRIM1 DNA primase;DNA primase small subunit yes no 0 0 0 4 0 1 60.343 60.346 2 0.00064766 18457 20230619_1883_Aki_TMTPro18x_K_F4 144.38 87.964 63340 55609 58068 66070 51221 62877 61116 60495 70920 76372 63381 56199 73822 56761 60657 78827 65402 65024 58555 50988 59377 65824 54085 63768 61363 62396 71462 75722 65784 58017 74350 59728 62276 78033 62527 61907 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29560000 30500 1575 28658 57275 46276 46276 1 9606 Homo sapiens 0.04822350685526544 WLPLEANPEVTNQFLK Unmodified 1897.9938 0.993799 1214 A0A140VJZ4;P15374 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes no 0 0 0 1 0 1 64.103 64.103 3 1.5638E-11 20174 20230619_1880_Aki_TMTPro18x_K_F1 163.99 137.45 28358 24401 26038 32596 27486 27887 27666 33419 32355 35316 32478 32957 36547 32490 32754 40210 42829 43397 26213 22402 26699 32177 28433 28687 28052 33798 32733 35505 33498 33557 37014 33943 33970 40436 40885 41183 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42393000 30501 1214 28659 57276 46277 46277 1 9606 Homo sapiens 0.08072184766206192 WLPVQESSTDDK Unmodified 1403.6569 0.65687437 1572 C9JBL1;A0A5F9YFS9;Q9Y6A9 SPCS1 Signal peptidase complex subunit 1 yes no 0 0 0 4 0 1 54.831 54.842 2 0.00018146 16155 20230619_1883_Aki_TMTPro18x_K_F4 112.13 88.903 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30502 1572 28660 57277 46278 46278 1 9606 Homo sapiens -0.02880779061092653 WLQDVFNVPLVIQMTDDEK Oxidation (M) 2305.13 0.13003448 401 P23381;A0A024R6K8;P23381-2;G3V3Y5;G3V3H8;G3V277 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes no 0 1 0 7 0 1 66.498 66.521 3 0.0042633 20736 20230619_1887_Aki_TMTPro18x_K_F7 65.022 55.652 6576.4 3936.3 3641.7 5883.5 5732.4 4198.2 6722.4 6698.3 6117.6 13287 15005 13941 15341 12562 8971.4 18841 16803 18007 6048.4 3624.1 3987.1 5757.1 5802.8 4435.9 6704.8 6845.5 6644.7 13079 14974 14089 15344 13337 9722.7 18752 16010 17108 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8651900 30503 401 28661 57278 46279 46279 256 1 9606 Homo sapiens 0.02967466423933729 WLRPSGPMPADR Oxidation (M) 1397.6874 0.68740341 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;Q86SE4 L1CAM Neural cell adhesion molecule L1 yes no 0 1 1 3 0 1 40.563 40.621 3 0.02486 9858 20230619_1882_Aki_TMTPro18x_K_F3 63.8 50.396 79307 61402 65538 69972 50831 50834 74185 80272 85868 87447 95330 88568 93682 72994 93295 101080 94065 95085 73203 56304 67523 69769 54589 53566 73840 80155 87173 87977 97255 89389 95593 77316 94963 100760 90000 90372 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74854000 30504 2005 28662 57279 46280 46280 1261 1 9606 Homo sapiens 0.0044672084295598324 WLRPSGPMPADR Unmodified 1381.6925 0.69248879 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;Q86SE4 L1CAM Neural cell adhesion molecule L1 yes no 0 0 1 3 0 1 44.66 44.733 3 0.025221 11707 20230619_1882_Aki_TMTPro18x_K_F3 59.038 32.919 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30505 2005 28662 57280 46281 46281 1 9606 Homo sapiens 0.016910247055875516 WLSCTATPQIEEEVSLTQK Unmodified 2219.078 0.07799891 1852 H0YEN4;A0A8V8TQF7;P52948;P52948-5;A0A8V8TR21;H0YCR0;P52948-2;P52948-6;A0A8V8TPW9;A0A8V8TPX4;A0A8V8TRC7;H7C3P6;A0A3B3ITD8 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 6 0 1 62.359 62.411 3 0.0021692 19177 20230619_1886_Aki_TMTPro18x_K_F6 65.265 46.901 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30506 1852 28663 57281 46282 46282 1 9606 Homo sapiens 0.017223030101376935 WLTIQSGEQPYK Unmodified 1448.73 0.72997974 3270 Q6IBA0;O43920 NDUFS5 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 yes no 0 0 0 1 0 1 58.397 58.397 3 5.1961E-06 17858 20230619_1880_Aki_TMTPro18x_K_F1 140.63 112.52 62904 64203 73648 75721 82588 97338 85833 81671 88449 80356 86273 79713 100880 80128 76780 97237 85593 92375 58338 58835 74083 75805 85169 96418 86437 84485 89875 81300 89197 81036 101310 83570 79101 97109 81857 87765 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225190000 30507 3270 28664 57282 46283 46283 1 9606 Homo sapiens 0.02356394452181121 WLTPLHR Unmodified 921.51847 0.51847082 202 B7Z6Z7;A0A024R2I9;O15084;O15084-4;O15084-1 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A yes no 0 0 0 5 0 1 46.252 46.329 3 0.0045035 12217 20230619_1885_Aki_TMTPro18x_K_F5 110.61 53.148 12207 10936 15216 14245 14691 19262 11703 10127 13872 13602 16041 14774 17996 15766 15716 14224 17195 20174 11317 10036 15193 14171 15241 18880 12051 11079 14100 13613 16432 14981 18198 16158 16095 14657 16458 19088 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11006000 30508 202 28665 57283 46284 46284 1 9606 Homo sapiens 0.054572320624288295 WLVTLSQ Unmodified 845.4647 0.46470391 3132 J3KQP8;X6R9N0;Q7Z6K3 PTAR1 Protein prenyltransferase alpha subunit repeat-containing protein 1 yes no 0 0 0 2 0 1 64.509 64.517 2 0.0051353 20625 20230619_1881_Aki_TMTPro18x_K_F2 143.22 133.04 10982 11632 10188 11465 9362.1 9959.2 10493 11498 12981 14863 11067 10959 13412 9687.9 10989 12657 9298.2 13548 10167 10642 10410 11582 9822.8 10230 10596 11726 13027 14717 11545 11253 13484 10207 11135 12715 8942.2 12842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20336000 30509 3132 28666 57284 46285 46285 1 9606 Homo sapiens 0.03579014840045147 WMDEAQALDTADR Oxidation (M) 1536.6515 0.65147142 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;Q9BXJ9-4 NAA15;NARG1 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 1 0 1 0 1 51.272 51.272 2 2.0225E-10 14865 20230619_1880_Aki_TMTPro18x_K_F1 173.72 113.08 28619 18823 23283 30176 26218 28951 27864 27069 29645 33356 34115 30456 34378 24675 28257 38393 31738 37426 26390 17338 24181 29499 27058 29313 28058 27961 30299 33276 34772 30879 34755 26394 29093 38270 30373 35536 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25462000 30510 2297 28667 57285 46286 46286 1422 1 9606 Homo sapiens -0.09538825915251437 WMDEAQALDTADR Unmodified 1520.6566 0.6565568 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;Q9BXJ9-4 NAA15;NARG1 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 2 0.816 1 1 1 56.863 56.881 2 1.0601E-20 17347 20230619_1881_Aki_TMTPro18x_K_F2 220.29 204.4 162870 127390 156040 153600 114100 155970 156790 140810 163580 196820 166770 179450 206470 162190 167970 209450 190000 199450 150510 116870 158470 153030 123210 157140 155870 146460 166620 195350 172770 182310 207560 170450 172930 209030 181640 189510 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 102300000 30511 2297 28667 57286;57287;57288 46287;46288;46289 46288 3 9606 Homo sapiens -0.08294522052619868 WMEANQHSLNILGQK Oxidation (M) 1783.8676 0.86755262 1108 A0A0S2Z4W4;Q7Z3D7;P98175-2;P98175;P98175-5;A0A0S2Z4X1;P98175-4;P98175-3;Q6PKH5 DKFZp686E2459;RBM10 RNA-binding protein 10 yes no 0 1 0 1.5 0.5 1 1 52.163 52.183 3 0.0026943 15439 20230619_1881_Aki_TMTPro18x_K_F2 70.529 53.45 51420 39798 50018 52226 47538 56298 54008 50387 59874 61449 58765 57606 63488 54547 57291 66702 62736 62477 47520 36545 50907 51767 49783 56473 54267 52193 60649 61402 60546 58560 64360 57008 58719 66574 59971 59387 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 54059000 30512 1108 28668 57289;57290 46290;46291 46291 682 2 9606 Homo sapiens 0.006973549892791198 WMGGAELSDDGR Oxidation (M) 1308.5405 0.54046441 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 1 0 1.5 0.5 1 1 45.247 45.288 2 0.0001737 12237 20230619_1881_Aki_TMTPro18x_K_F2 115.82 106.63 44603 37567 39628 46921 52165 47136 44852 51302 61787 50013 55040 57169 56355 45924 51800 68575 55904 66683 41212 34467 40884 46618 52957 47772 46181 52077 61694 50843 56855 57369 57252 48941 53080 68383 53524 63316 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51673000 30513 3598 28669 57291;57292 46292 46292 2265 1 9606 Homo sapiens -0.10146420832688818 WMGGAELSDDGR Unmodified 1292.5455 0.54554978 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 3 0 1 50.911 50.982 2 0.015736 14562 20230619_1882_Aki_TMTPro18x_K_F3 72.321 65.261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30514 3598 28669 57293 46293 46293 1 9606 Homo sapiens -0.0890211697005725 WMQSELNVEEVVNDR Oxidation (M) 1862.8469 0.84687676 3980 Q4VC31;C9JQ41;H7C525;C9JBU9 CCDC58 Coiled-coil domain-containing protein 58 yes no 0 1 0 2 0 1 58.765 58.778 3 4.4735E-06 18117 20230619_1881_Aki_TMTPro18x_K_F2 118.47 108.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30515 3980 28670 57294 46294 46294 2631 1 9606 Homo sapiens -0.05003280181063019 WMSPEAILEGDFSTK Unmodified 1709.7971 0.79707302 3847 Q13308;Q13308-6;Q13308-4;Q13308-2;Q13308-3;Q9NSQ6;H0Y8F1;B3KP36;C9JQR6 PTK7;DKFZp434L0319 Inactive tyrosine-protein kinase 7 yes no 0 0 0 6 0 1 64.634 64.678 3 1.6987E-05 20194 20230619_1886_Aki_TMTPro18x_K_F6 107.61 97.686 50897 48313 49566 41646 37295 52673 53064 47310 49968 58914 66683 70249 65700 62044 83894 74727 61258 67599 47100 44169 50248 42814 40207 52318 52514 49024 51759 59250 67664 70532 67956 64889 83694 74531 58874 64258 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96509000 30516 3847 28671 57295 46295 46295 1 9606 Homo sapiens -0.029433631190613596 WMSQHNR Oxidation (M) 973.41883 0.41883313 3749 V9HW44;P68402;P68402-3;P68402-2;P68402-4 HEL-S-303;PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta yes no 0 1 0 5 0 1 26.54 26.611 3 0.060092 4614 20230619_1885_Aki_TMTPro18x_K_F5 47.75 33.755 5086.3 2703.1 5856 4849.6 7834.2 5437.8 6703.6 6139 7319.9 5483 5710.4 5106.9 6761.7 5428 5829.9 6498.2 7037.4 6902.2 4698.8 2496.4 5904.4 4729.3 7922.6 5475.3 6841.9 6205.8 7356.5 5568.9 5976.9 5218.1 6823.2 5648.4 6014.6 6533.3 6720.7 6552 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1769600 30517 3749 28672 57296 46296 46296 2420 1 9606 Homo sapiens -0.06893953613837311 WNDFAEDSLR Unmodified 1251.552 0.55201537 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;A0A2R8Y3X5;O60313-13;E5KLK0;A0A2R8YFD1;Q6PEK6 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 2.5 0.5 1 1 56.097 56.124 2 1.3689E-13 16827 20230619_1882_Aki_TMTPro18x_K_F3 227.27 190.87 127000 101360 120470 151000 135220 159220 159060 161460 182280 162390 169750 193330 190830 162440 178350 192330 195400 217330 117360 93200 123360 148430 140030 160340 159680 164840 183840 165020 175860 193770 193520 170180 182600 194150 186950 206080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100390000 30518 2865 28673 57297;57298 46297;46298 46298 2 9606 Homo sapiens -0.0636985574699338 WNENVQYLSEDR Unmodified 1551.6954 0.69538514 2107 Q53TH5;Q96B14;A8K7H4;O43929-2;O43929-3;O43929;B7Z632;B7Z2M4 ORC4L;ORC4 Origin recognition complex subunit 4 yes no 0 0 0 2.5 0.5 1 1 52.388 52.437 2 0.04582 15252 20230619_1882_Aki_TMTPro18x_K_F3 64.945 57.564 + 49989 41719 49828 54020 49364 53806 56707 53535 55812 65449 61623 54951 60168 58866 65726 70003 67712 78134 46228 38292 50650 53538 51486 54422 56732 55038 57194 65179 62869 56426 61771 61178 66875 70606 64839 74088 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59801000 30519 2107 28674 57299;57300 46299 46299 1 9606 Homo sapiens -0.05839473426567565 WNLDELPK Unmodified 1013.5182 0.51819605 3137 P17844;J3KTA4;P17844-2;B5BUE6;B4DNG2;Q7Z2V5;Q59E92;A0A7I2V2S0;A0A7I2V507;J3QRQ7;J3KTQ4;C1IK54;J3QR02;X6RLV5 DDX5;DKFZp686J01190;DDX5-ETV4 fusion Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 6 0.816 1 1 1 59.107 59.163 2 0.0036699 17546 20230619_1885_Aki_TMTPro18x_K_F5 129.42 64.664 377930 312640 344180 387240 300540 449260 395120 389570 447620 467920 394460 364870 488700 371120 363170 514320 414400 436970 349230 286840 352210 385670 319210 447910 394530 404150 451260 465640 411040 375510 489560 390390 375180 509740 396160 415770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 407520000 30520 3137 28675 57301;57302;57303 46300;46301 46300 2 9606 Homo sapiens 0.011977675518892283 WNPEALPSNTGEVNFQSGIIAAR Unmodified 2470.2241 0.2240863 1056 A0A0S2A4E4;A0A0M4G3H8;P35573-2;P35573-3;P35573;G1UI17 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase yes no 0 0 0 8 0 1 62.086 62.114 3 0.01044 18683 20230619_1888_Aki_TMTPro18x_K_F8 50.029 38.556 93055 66302 75436 100130 71186 83307 106020 87279 92768 89955 83385 103240 98282 70911 100590 88626 84005 111740 85841 61001 78208 98057 75231 85563 104410 89073 94896 91139 86833 103010 99836 75239 101270 90100 80728 105780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 286460000 30521 1056 28676 57304 46302 46302 1 9606 Homo sapiens 0.04778321570438493 WNQDTMEQK Oxidation (M) 1194.4975 0.49753696 322 Q15637-6;A0A024R566;B4DJU4;Q15637;Q15637-2;Q15637-3;Q15637-4;A0A024R572;A0A024R588;A0A024R5D9;B4DSE4;Q15637-5;A0A7P0T9U7;Q14820;F8WEV5 SF1 Splicing factor 1 yes no 0 1 0 3.5 0.5 1 1 41.31 41.361 3 0.00073808 10187 20230619_1882_Aki_TMTPro18x_K_F3 97.456 82.484 159210 125110 155740 157450 182710 200350 185600 180590 218240 199870 222860 202810 193730 168680 191220 204930 222720 190640 147160 114820 158920 156910 187760 198880 187970 186340 220590 201100 227020 204670 198580 176990 196290 204530 212570 181340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 271400000 30522 322 28677 57305;57306 46303;46304 46303 195 2 9606 Homo sapiens -0.09193190890096048 WNQDTMEQK Unmodified 1178.5026 0.50262234 322 Q15637-6;A0A024R566;B4DJU4;Q15637;Q15637-2;Q15637-3;Q15637-4;A0A024R572;A0A024R588;A0A024R5D9;B4DSE4;Q15637-5;A0A7P0T9U7;Q14820;F8WEV5 SF1 Splicing factor 1 yes no 0 0 0 3 0 1 46.184 46.262 2 0.00047354 12419 20230619_1882_Aki_TMTPro18x_K_F3 119.68 107.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30523 322 28677 57307 46305 46305 1 9606 Homo sapiens -0.0794888702746448 WNRPGDR Unmodified 899.4362 0.43619775 123 F8VWL0;A0A024R120;Q12800-2;Q12800-3;Q12800-4;Q12800;C9JWL3;F8VX55;A0A024R2J0;A8KAN5;Q9NZI7-4;Q9NZI7 TFCP2;UBP1 Alpha-globin transcription factor CP2;Upstream-binding protein 1 yes no 0 0 1 7 0.816 1 1 1 30.209 30.259 3 0.073845 5735 20230619_1888_Aki_TMTPro18x_K_F8 58.194 2.5902 74825 61932 69911 74722 97046 90011 84204 87450 105930 68850 93059 95975 80619 88046 96050 68509 102860 88116 69156 56806 71841 74618 98221 89844 86309 89018 106030 71481 95591 95916 83554 89968 97611 70370 98248 83539 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 36960000 30524 123 28678 57308;57309;57310 46306 46306 1 9606 Homo sapiens -0.017542900165267383 WNSPAEEGSSDCEVFSK Unmodified 1927.7894 0.78942146 3544 P34932;B4DH02;V9HW33;Q59GF8;B4DUS3;B4DIZ3;B4DT47;B4E354;B4E0H6;O14992 HSPA4;HEL-S-5a;HS24/p52 Heat shock 70 kDa protein 4 yes no 0 0 0 3.67 0.471 1 2 54.451 54.477 3 5.6373E-30 16120 20230619_1882_Aki_TMTPro18x_K_F3 223.29 213.23 161750 137650 160570 170130 139490 165180 166200 170390 186060 218030 202270 204460 242010 210570 195170 275940 226300 240350 149600 126270 162960 169110 147370 167520 166720 174980 189290 217350 208500 208490 243570 220410 201460 274010 216320 228610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1495299999.9999998 30525 3544 28679 57311;57312;57313 46307;46308 46307 2 9606 Homo sapiens -0.13736167177285097 WNSVSPASAGK Unmodified 1102.5407 0.5407224 567 A0A024R9D2;Q86UE4;E5RJU9;H0YB56;H0YBE0 MTDH Protein LYRIC yes no 0 0 0 2 0 1 47.037 47.112 2 1.8234E-08 13113 20230619_1881_Aki_TMTPro18x_K_F2 174.57 120.41 72129 63976 70542 70828 73370 84967 77616 83989 91923 78824 88961 92137 82934 73776 84220 93692 111590 96248 66719 58618 71840 71184 76151 84827 78482 85708 92667 80352 91180 92331 84957 77739 87173 93947 106400 91446 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80602000 30526 567 28680 57314 46309 46309 1 9606 Homo sapiens -0.0064463305047866015 WNTDNTLGTEITVEDQLAR Unmodified 2175.0444 0.044390595 1286 A0A1L1UHR1;P21796;B3KTS5;C9JI87 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 0 3.5 0.5 1 1 61.596 61.612 3 2.2126E-39 19078 20230619_1882_Aki_TMTPro18x_K_F3 250.47 235.86 67236 52603 73502 73040 65687 79649 74610 73419 85125 70114 68638 67652 96143 72300 73747 86292 75993 76814 62203 48331 74032 72159 69134 79860 75050 75358 85461 71011 72387 68997 96124 75201 75575 85930 72693 73055 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147290000 30527 1286 28681 57315;57316 46310;46311 46310 2 9606 Homo sapiens 0.003870175626616401 WPDLLTEMVNR Unmodified 1372.6809 0.68092105 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM67;P55060-2 CSE1L Exportin-2 yes no 0 0 0 4.5 3.5 1 1 64.492 64.503 2 4.8623E-08 19700 20230619_1888_Aki_TMTPro18x_K_F8 169.92 141.39 53524 31217 42765 58667 36350 73353 51216 56241 86281 77405 69716 115420 123730 117920 60136 149600 131900 192670 49321 28835 44381 57094 39028 72530 51849 59210 85292 78326 74896 115500 121730 123230 66743 151910 125930 182320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166800000 30528 1462 28682 57317;57318 46312;46313 46313 2 9606 Homo sapiens 0.00948782891555311 WPDPEDLLTPR Unmodified 1337.6616 0.66156582 4262 Q8TAE8 GADD45GIP1 Growth arrest and DNA damage-inducible proteins-interacting protein 1 yes yes 0 0 0 5 0 1 62.954 63.001 2 0.00052389 19288 20230619_1885_Aki_TMTPro18x_K_F5 115.7 75.596 65165 54401 57458 72011 59808 69652 70978 62351 92578 74935 79456 75818 90581 72560 71857 90562 70052 83868 60205 49945 59142 71210 62317 70433 71546 64589 92515 75148 82579 76860 91167 75920 73410 90290 67139 79678 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52625000 30529 4262 28683 57319 46314 46314 1 9606 Homo sapiens 0.006241498723056793 WPECNALSR Unmodified 1131.5131 0.51312744 2127 A8K8X0;Q14CX7-2;Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes no 0 0 0 7 0 1 47.674 47.762 2 0.013309 12563 20230619_1887_Aki_TMTPro18x_K_F7 79.16 69.572 116810 85131 93680 103650 98616 119050 108430 112290 146850 110090 98595 90977 107130 83271 108640 119170 114040 99016 107760 78131 97232 103360 102520 119030 109910 115100 145430 110880 103770 93030 109120 88075 110790 118020 108950 94314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57610000 30530 2127 28684 57320 46315 46315 1 9606 Homo sapiens -0.047368595823854776 WPTETDVSSAK Unmodified 1219.5721 0.57208211 2902 P27816;E7EVA0;P27816-6;A0A804HKE7;P27816-2;B4DM10;Q6NX68;A0A024R2V2;A0A024R2S1;Q05D06 MAP4 Microtubule-associated protein 4;Microtubule-associated protein yes no 0 0 0 5 0 1 50.345 50.42 2 0.0046774 13954 20230619_1885_Aki_TMTPro18x_K_F5 104.43 82.584 68029 56947 61156 55396 57630 66502 68344 65851 70656 76936 82137 80197 83121 74454 76661 89514 86755 84163 62861 52132 62614 56278 60457 66419 68379 67607 72332 77249 83767 81098 84523 77760 78696 89381 82891 80005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26251000 30531 2902 28685 57321 46316 46316 1 9606 Homo sapiens -0.028921048070742472 WQASSLPADDLCTENAIMLK Unmodified 2262.0661 0.066054015 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 6.5 0.5 1 1 62.689 62.732 3 1.1647E-08 19062 20230619_1887_Aki_TMTPro18x_K_F7 97.32 72.726 35351 40443 38519 40599 33883 38538 41592 43683 40498 45883 44505 42527 49293 33749 44371 44634 55906 50451 32794 36996 38811 40994 35754 39266 41479 44325 41512 46121 45675 43031 49878 35734 45839 44999 53341 47877 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 199760000 30532 3881 28686 57322;57323 46317 46317 1 9606 Homo sapiens -0.014496370046344964 WQDAQATLQK Unmodified 1187.5935 0.59348625 3862 Q59GU6;Q53HL9;Q53GY8;Q13596;Q13596-2;Q13596-3;H0YK42 SNX1 Sorting nexin-1 yes no 0 0 0 7.5 0.5 1 1 50.696 50.773 3 0.00026041 13933 20230619_1887_Aki_TMTPro18x_K_F7 115.18 73.174 217160 205060 233390 244900 251940 274090 240480 249420 330980 248840 256350 250760 282060 225690 268860 275260 246260 257750 201120 187980 236060 244450 260010 274420 245950 256490 328910 251780 267620 253710 286320 236290 272420 274850 235920 244950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 206330000 30533 3862 28687 57324;57325 46318;46319 46318 2 9606 Homo sapiens 0.007193250123236794 WQDIQNDPR Unmodified 1170.5418 0.54178503 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8Y7I0;A0A2R8Y7M9;Q8TDI0;Q6ZU36 CHD4;CHD5 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 yes no 0 0 0 3.5 0.5 1 1 44.241 44.299 2 0.00043673 11502 20230619_1882_Aki_TMTPro18x_K_F3 135.86 90.782 199540 151190 177030 196850 199890 210890 208540 201280 239500 230000 241910 234420 274900 203180 213680 266090 270920 239570 184250 138830 182160 195190 206050 211980 210720 207090 242380 231070 249420 236810 276450 214040 221800 264750 258440 227940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 278760000 30534 1005 28688 57326;57327 46320;46321 46320 2 9606 Homo sapiens -0.03666418681586947 WQELNQLTIDR Unmodified 1414.7205 0.72047768 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8 DST Dystonin yes no 0 0 0 6 0 1 59.511 59.573 2 0.048314 17954 20230619_1886_Aki_TMTPro18x_K_F6 65.232 45.47 38120 32629 44576 44563 38481 50796 41060 41385 50996 43063 42446 43599 49124 43019 47676 51162 49807 57011 35308 29964 44659 44092 40586 50646 41576 42981 51040 43480 44260 44230 49871 44833 48645 51597 47684 54061 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13383000 30535 1693 28689 57328 46322 46322 1 9606 Homo sapiens 0.02970626166643342 WQFDIECDK Unmodified 1239.523 0.52302343 3845 Q13257 MAD2L1 Mitotic spindle assembly checkpoint protein MAD2A yes yes 0 0 0 3.8 1.17 1 1 1 2 59.307 59.332 2;3 0.00044843 17599 20230619_1885_Aki_TMTPro18x_K_F5 114.4 99.711 127980 94473 116700 120990 92354 110610 107020 105870 120840 145130 114300 115180 145230 123400 106230 160160 130870 138840 118180 86745 119140 119880 98363 112530 107540 109560 122270 143640 118910 118580 145420 128970 110370 159000 125040 132070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138100000 30536 3845 28690 57329;57330;57331;57332;57333 46323;46324;46325 46324 3 9606 Homo sapiens -0.08715716367669302 WQGNDIVVK Unmodified 1057.5556 0.55564418 963 V9HWF0;A0A0A0MTH3;Q13418;Q13418-3;Q13418-2 HEL-S-28;ILK Integrin-linked protein kinase yes no 0 0 0 7 0 1 52.17 52.244 2 0.00018638 14584 20230619_1887_Aki_TMTPro18x_K_F7 164.46 112.67 56517 50108 53542 58845 63909 76385 72414 69924 87697 87476 89760 94027 102850 78712 86317 99103 104180 99376 52264 45937 54844 58939 65859 75752 72970 72337 88582 87671 92586 94629 103720 82815 89115 99240 99469 94402 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36778000 30537 963 28691 57334 46326 46326 1 9606 Homo sapiens 0.029168588175025434 WQHDLFDSGFGGGAGVETGGK Unmodified 2120.9552 0.95518166 4189 Q86V81;E9PB61 ALYREF THO complex subunit 4 yes no 0 0 0 5.17 1.34 1 1 1 2 1 58.625 58.67 3;4 5.0834E-16 17561 20230619_1886_Aki_TMTPro18x_K_F6 146.13 136.38 492360 291280 422260 550290 401100 550340 484170 540750 645270 596890 554320 602980 709690 549940 468800 771900 675050 718840 453940 269060 435360 533830 421840 555550 488420 554530 644760 600530 579820 610260 707830 580950 494020 768170 644200 683160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2030999999.9999998 30538 4189 28692 57335;57336;57337;57338;57339;57340 46327;46328 46328 2 9606 Homo sapiens -0.06045772606285027 WQLSVATEQPELEGPR Unmodified 1838.9163 0.91627696 1748 A0A8I5KNP3;Q9NR30;A0A8I5KNN2;A0A8I5KYZ4;Q9NR30-2;A0A8I5KND9;Q8NI92 DDX21;OK/SW-cl.65 Nucleolar RNA helicase 2 yes no 0 0 0 4.5 0.5 1 1 58.654 58.683 3 9.307E-46 17346 20230619_1885_Aki_TMTPro18x_K_F5 240.92 213.89 90406 79814 82817 89160 85464 97354 101130 90171 119250 105940 103780 94054 109160 98487 90508 116010 111670 115170 83580 73137 84851 89403 89041 97680 101580 93064 119820 105920 107350 96225 110420 102370 93674 116180 106660 109390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212770000 30539 1748 28693 57341;57342 46329 46329 1 9606 Homo sapiens 0.030375468300007924 WQMNPYDR Oxidation (M) 1124.4709 0.47092828 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8;A0A7I2V4Q0;A0A7I2YQD0 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 1 0 5.5 0.5 1 1 42.052 42.141 2 0.026595 10403 20230619_1886_Aki_TMTPro18x_K_F6 75.692 54.01 163070 120000 131400 155320 170370 174060 174990 165810 195010 123640 132950 127900 114350 101960 171670 155460 154360 124840 150450 110200 136840 154160 173980 174410 176690 168880 194830 127460 138620 128910 120090 108780 172510 153700 147660 119000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146250000 30540 1661 28694 57343;57344 46330 46330 1083 1 9606 Homo sapiens -0.08632834990771698 WQMNPYDR Unmodified 1108.476 0.47601365 1661 Q92499;A3RJH1;A0A7I2V4F0;A0A7I2V430;A0A7I2V2M5;F1T0B3;Q92499-2;A0A7I2YQ77;A0A7I2V4J3;A0A7I2V421;A0A7I2V5X8;A0A7I2V4Q0;A0A7I2YQD0 DDX1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 7.5 0.5 1 1 48.495 48.571 2 0.0027239 12922 20230619_1888_Aki_TMTPro18x_K_F8 122.18 92.366 302590 252950 301850 316790 320210 415120 358260 366320 441900 300380 289550 285580 313500 246490 325560 340200 357990 301380 279830 232100 307170 315930 332770 410970 361510 375750 438990 306960 305360 289450 319770 260560 332680 338160 341820 286880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113640000 30541 1661 28694 57345;57346 46331;46332 46332 2 9606 Homo sapiens -0.0738853112814013 WQNNLLPSR Unmodified 1126.5883 0.5883413 2214 I3L3P7;B2R4W8;P62244;A8K7H3;H3BVC7 RPS15A;hCG_1994130 40S ribosomal protein S15a yes no 0 0 0 3.5 0.5 1 1 51.463 51.51 2 0.00010826 14807 20230619_1882_Aki_TMTPro18x_K_F3 154.28 102.93 2080100 1909600 1959200 2008900 2049700 2492800 2341100 2315300 2624100 1325800 1270200 1030100 1179000 915550 1726100 1422400 1352100 944080 1924000 1748700 2002400 2027900 2131900 2479800 2351400 2350900 2599100 1386300 1362800 1057600 1232000 974880 1723100 1395600 1294400 903260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1264900000 30542 2214 28695 57347;57348 46333;46334 46333 2 9606 Homo sapiens 0.030110659403590034 WQNSYSIK Unmodified 1024.4978 0.49779495 1895;3100 A0M8W4;Q15819;G3V113;Q13404-8;I3L0A0;Q13404;Q13404-7;Q13404-2;Q13404-1;G3V2F7;Q13404-6 UBE2V2;UBE2V1;TMEM189-UBE2V1 Ubiquitin-conjugating enzyme E2 variant 2;Ubiquitin-conjugating enzyme E2 variant 1 no no 0 0 0 2.33 0.471 2 1 50.35 50.414 2;3 0.0002855 14656 20230619_1881_Aki_TMTPro18x_K_F2 137.13 86.252 268560 189940 247030 286470 262720 409780 296780 308950 456600 287650 282360 280080 315230 250110 305190 319730 344550 351320 247960 174760 253380 282710 273880 402210 302040 321920 448650 292100 299310 283770 320220 262840 312760 321880 329330 333330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 479240000 30543 1895;3100 28696 57349;57350;57351 46335;46336;46337 46335 3 9606 Homo sapiens -0.01347403107934042 WQNVHVQIDNR Unmodified 1407.7007 0.70074529 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A494C1D7;Q03001-9;B4DSS9;Q03001-3;Q6P0N6 DST Dystonin yes no 0 0 0 8 0 1 44.422 44.44 3 1.6443E-12 11261 20230619_1888_Aki_TMTPro18x_K_F8 173.04 162.98 56204 42819 55913 60493 67924 67260 62927 59783 75113 44830 52482 45222 53444 42545 49047 49383 57185 45923 51946 39353 57019 59704 69423 67331 64096 61214 74835 46189 54905 45854 54304 44345 50397 49328 54558 43696 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40512000 30544 1693 28697 57352 46338 46338 1 9606 Homo sapiens 0.013202949465721758 WQPDTEEEYEDSSGNVVNK Unmodified 2224.9397 0.93965075 2066 B3KY12;A8K7V1;A8K566;Q12874;B4DW90 SF3A3 Splicing factor 3A subunit 3 yes no 0 0 0 1.5 0.5 1 1 53.05 53.067 3 0.00011934 15835 20230619_1881_Aki_TMTPro18x_K_F2 78.021 66.399 11251 7999.8 9082.8 11174 9281.7 9811 12121 11565 10715 10952 12450 14666 15393 12590 12032 14565 14088 13834 10378 7353.5 9423.6 11003 9696.9 10063 12013 11684 11066 11209 12836 14648 15454 13157 12421 14558 13458 13148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126030000 30545 2066 28698 57353;57354 46339 46339 1 9606 Homo sapiens -0.123821487045916 WQPTASEPVK Unmodified 1141.5768 0.57677356 2827 K7EMM8;D3DUE6;Q49A26-5;Q49A26-2;Q49A26;D3DUE7;Q49A26-4;Q49A26-3;K7EQB2;K7EPU6 GLYR1;N-PAC Putative oxidoreductase GLYR1 yes no 0 0 0 6 0 1 47.578 47.659 3 0.035961 12882 20230619_1886_Aki_TMTPro18x_K_F6 41.689 26.999 51471 44931 47941 50185 50821 57905 57477 53103 67454 44116 54111 47700 46791 37153 56349 52521 47282 41775 47586 41174 49057 50364 52771 57864 57855 54359 67519 45220 55803 47960 48419 39474 56610 51949 45289 39812 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25036000 30546 2827 28699 57355 46340 46340 1 9606 Homo sapiens 0.011648241263856107 WQQEQEQR Unmodified 1130.5105 0.51048491 2480 B4DGD9;Q96SI1;V9GYY8;Q96SI1-2 KCTD15 BTB/POZ domain-containing protein KCTD15 yes no 0 0 0 2 0 1 34.568 34.624 2 0.0031798 7524 20230619_1881_Aki_TMTPro18x_K_F2 120.15 105.38 12105 9395.5 16075 17255 20456 26001 18250 17125 20106 17719 24159 26866 20182 20057 22011 12289 27363 22626 11220 8664.2 16078 16870 20859 25401 18589 18130 20523 18163 24445 26595 20833 20499 22587 13090 26096 21398 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6463800 30547 2480 28700 57356 46341 46341 1 9606 Homo sapiens -0.049549917156582524 WQVVDTPGILDHPLEDR Unmodified 1988.9956 0.99558991 2806 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;Q9BZE4-2;B4DHR2;Q9BZE4-3;O60747 GTPBP4 Nucleolar GTP-binding protein 1 yes no 0 0 0 3.5 1.12 1 1 1 1 59.857 59.872 3 1.9433E-48 18326 20230619_1883_Aki_TMTPro18x_K_F4 282.3 256.58 30405 27293 31990 35585 31673 37722 37991 34149 49974 28830 27195 27650 32062 22858 31749 34044 34947 33125 28144 25046 32390 35274 33128 37889 38281 35011 49261 29433 29196 27978 32541 24350 32477 33969 33393 31478 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110600000 30548 2806 28701 57357;57358;57359;57360 46342;46343 46342 2 9606 Homo sapiens 0.04065193784163057 WREEQMER Oxidation (M) 1178.5139 0.51385572 3421 P09496-2;P09496-4;P09496-3;P09496;F8WF69 CLTA Clathrin light chain A yes no 0 1 1 2 0.816 1 1 1 29.923 29.977 3 0.01763 5686 20230619_1881_Aki_TMTPro18x_K_F2 74.376 33.382 117770 87926 110390 106830 127950 132230 124300 131690 157830 142330 155000 149290 153370 128590 137500 164530 159500 142100 108780 80687 112980 106700 131410 131790 126600 134800 158750 143510 159030 150610 155840 135190 141460 163440 152270 135270 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 522590000 30549 3421 28702 57361;57362;57363 46344;46345 46345 2041 2 9606 Homo sapiens -0.0682606493332969 WREEQMER Unmodified 1162.5189 0.5189411 3421 P09496-2;P09496-4;P09496-3;P09496;F8WF69 CLTA Clathrin light chain A yes no 0 0 1 2.5 0.5 1 1 34.513 34.572 3 0.00020316 7478 20230619_1881_Aki_TMTPro18x_K_F2 152.28 50.633 202800 165410 201310 197840 200660 226680 216000 216550 262570 279910 275620 283550 292990 238190 226900 289320 297610 288050 187510 151710 204590 197560 209000 226820 218400 223580 265530 279570 282890 286080 295310 249960 236130 289670 284000 273640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 354040000 30550 3421 28702 57364;57365 46346;46347 46346 2 9606 Homo sapiens -0.05581761070698121 WRELPDSK Unmodified 1029.5243 0.52434406 2871 Q6LES8;E5KSX8;E5KSU5;Q00059;H7BYN3;Q00059-2;Q05D31 TFAM Transcription factor A, mitochondrial yes no 0 0 1 7 0 1 43.608 43.687 3 0.0033456 10772 20230619_1887_Aki_TMTPro18x_K_F7 102.55 43.95 164020 160970 173120 144760 201200 188010 185180 183510 169820 197150 201350 164810 192540 146380 197760 195750 200330 165370 151920 147190 175300 148310 205960 186950 187250 188060 175310 197450 204520 168300 196890 154280 201120 194240 191410 157520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125240000 30551 2871 28703 57366 46348 46348 1 9606 Homo sapiens 0.010762857834151873 WRPDEEILK Unmodified 1184.619 0.61897272 560 A0A024R983;P10155;P10155-3;P10155-5;P10155-4;B3KN94;G5E9R9 TROVE2 60 kDa SS-A/Ro ribonucleoprotein yes no 0 0 1 5.5 0.5 1 1 50.619 50.696 3 0.00081127 14072 20230619_1885_Aki_TMTPro18x_K_F5 97.813 49.99 252030 230220 261150 268180 251410 290690 301630 295640 316320 328040 339450 302890 371240 291230 316730 390930 370420 389510 233290 211020 264460 268100 263290 292360 301720 302530 322430 329010 348310 308530 375160 306230 326410 390920 354030 369900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 446240000 30552 560 28704 57367;57368 46349;46350 46349 2 9606 Homo sapiens 0.034047995347464166 WRPEDAEEAEHR Unmodified 1523.6753 0.6753184 2407 H0YAE8;E7EUV9;Q53XR2;B3KST9;F8W8D3;Q14493;B4DUW7 SLBP Histone RNA hairpin-binding protein yes no 0 0 1 1.5 0.5 1 1 35.366 35.394 4 7.0545E-06 8149 20230619_1880_Aki_TMTPro18x_K_F1 127.76 93.578 56523 39210 60769 56795 41116 41386 45735 50735 54339 94707 98383 112020 103150 88916 68657 67428 128180 95720 52248 36061 61038 55724 44356 43248 46213 52371 56782 93786 99111 111970 103520 91374 73674 69717 121840 90735 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89999000 30553 2407 28705 57369;57370 46351 46351 1 9606 Homo sapiens -0.06557224366542869 WSDNKDDILK Unmodified 1232.6037 0.60371659 1524 Q14643;Q14643-7;A0A3B3ITU8;Q14643-5;Q14643-6;Q14643-8;Q14643-2;Q14643-3;A0A3B3IU04;Q14643-4;A0A3F2YNW8;A0A8C8KBY2;A0A3B3IRT5;B4DER3;A0A024R2I2;A0A024R2E1;A0A3B3ITM6;B7ZMI3 ITPR1 Inositol 1,4,5-trisphosphate receptor type 1 yes no 0 0 1 6 0 1 51.163 51.24 3 0.041555 14444 20230619_1886_Aki_TMTPro18x_K_F6 55.353 34.512 49188 43991 42009 50513 78210 74737 67116 65584 65581 82636 77582 88811 68203 61464 71002 82491 68561 80828 45454 40320 43863 50784 77982 73564 68244 68061 67486 82736 78716 88885 70051 65390 72089 82432 65707 76743 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28403000 30554 1524 28706 57371 46352 46352 1 9606 Homo sapiens -0.0032811205312555103 WSDQGPAQTSR Unmodified 1231.5582 0.55816338 319 A0A024R542;Q9C0C2;Q86TK2 TNKS1BP1 182 kDa tankyrase-1-binding protein yes no 0 0 0 5 0 1 38.098 38.191 2 0.00028807 8803 20230619_1885_Aki_TMTPro18x_K_F5 121.6 102.33 15192 9917.6 10616 13465 17087 18004 17313 14305 23096 17801 19297 22432 21395 16585 17449 17831 22648 29307 13995 9117 11281 13356 17256 17776 17601 14972 23036 17958 20086 22345 21577 17391 18103 18535 21665 27689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13415000 30555 319 28707 57372 46353 46353 1 9606 Homo sapiens -0.04835337515487481 WSEPNEEELIK Unmodified 1372.6511 0.65106071 3568 Q6FHX6;P39748;B4DWZ4;P39748-2;I3L3E9 FEN1 Flap endonuclease 1 yes no 0 0 0 2.5 0.5 1 1 55.864 55.893 2 1.8734000000000002E-30 16729 20230619_1882_Aki_TMTPro18x_K_F3 277.76 208.92 176550 147290 167010 172420 139110 187620 170430 163240 173450 197190 198990 178490 211610 180630 184640 232070 204950 211440 163200 135050 170100 172280 147810 187960 170200 169380 177670 196900 203370 182270 214290 188970 189620 231090 195940 201020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 125890000 30556 3568 28708 57373;57374 46354;46355 46355 2 9606 Homo sapiens -0.02035877572757272 WSHEYQEATIEK Unmodified 1519.6943 0.69432251 3800 Q05B42;Q0D2N8;Q6SZW1-2;Q6SZW1;J3KSG7;B3KSI2 SARM1 Sterile alpha and TIR motif-containing protein 1 yes no 0 0 0 4 0 1 45.999 46.042 3 1.0452E-09 12180 20230619_1883_Aki_TMTPro18x_K_F4 173.19 142.32 133650 56664 127210 126170 102590 106550 123820 122170 143980 159600 179510 179860 188170 154120 157160 188660 222790 209950 123160 52589 129370 121360 109060 109500 124320 124780 147000 159860 182860 180820 190310 161710 164140 190110 212440 199230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55173000 30557 3800 28709 57375 46356;46357 46356 2 9606 Homo sapiens -0.04473687795484693 WSLELEDQER Unmodified 1303.6044 0.60444487 38 A0A024QZF1;P37198 hCG_19665;NUP62 Nuclear pore glycoprotein p62 yes no 0 0 0 1.5 0.5 1 1 54.529 54.553 2 1.0973E-16 16233 20230619_1880_Aki_TMTPro18x_K_F1 199.46 161.73 189980 161480 188140 211600 159580 202170 189280 186010 209750 222600 220040 207510 242280 211580 218550 273220 228310 222030 175690 148220 191000 209400 169030 204710 189840 192190 213040 222580 226170 211640 245470 221290 223500 270570 218310 211450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146860000 30558 38 28710 57376;57377 46358;46359 46358 2 9606 Homo sapiens -0.0352131740405639 WSLQSEAHR Unmodified 1112.5363 0.53630573 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 0 6.5 0.5 1 1 38.781 38.854 3 1.3047E-17 9062 20230619_1886_Aki_TMTPro18x_K_F6 214.05 138.86 110950 106270 134150 132320 142400 140600 131800 140760 127190 125880 121090 101380 99924 79934 108600 82013 101210 85714 102880 97459 134420 131630 146740 141600 133460 143360 129650 127220 123500 103290 103010 83330 109710 82694 96805 81429 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 254010000 30559 1426 28711 57378;57379 46360;46361 46360 2 9606 Homo sapiens -0.015460974733969124 WSLTLSPK Unmodified 930.51747 0.51746776 1713 A0A7P0TB23 yes yes 0 0 0 3.5 0.5 1 1 56.692 56.713 2 0.067716 16926 20230619_1883_Aki_TMTPro18x_K_F4 71.342 36.243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30560 1713 28712 57380;57381 46362;46363 46363 2 9606 Homo sapiens 0.04942972902847487 WSMVDVQFVR Oxidation (M) 1281.6176 0.61759251 253 A0A024R3M1;Q9P016 THYN1 Thymocyte nuclear protein 1 yes no 0 1 0 1 0 1 57.128 57.128 2 0.0093087 17337 20230619_1880_Aki_TMTPro18x_K_F1 73.573 63.985 43491 40709 44859 47609 49344 49733 49201 46733 60886 45128 50074 48280 48558 47578 47655 51034 52230 60875 40262 37313 45533 47548 50870 50083 49971 47925 60885 45833 51810 48866 49616 49273 48750 51770 49989 57683 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19744000 30561 253 28713 57382 46364 46364 148 1 9606 Homo sapiens -0.011951578256685025 WSNFDPTGLER Unmodified 1320.6099 0.6098646 4603 Q9NVI7-2;Q9NVI7;Q96T67;Q5T9A4;A0A5K1VW56;H0Y2W2 ATAD3A;ATAD3B ATPase family AAA domain-containing protein 3A;ATPase family AAA domain-containing protein 3B yes no 0 0 0 6.5 0.5 1 1 58.028 58.089 2 1.7703E-05 17314 20230619_1886_Aki_TMTPro18x_K_F6 171.74 149.1 116010 88597 106070 129030 112630 152090 136160 151620 182350 184880 174680 179350 219680 182600 151250 217200 199250 227370 107150 81454 108870 127220 117420 151910 137360 155730 182940 184930 181490 182470 219530 190140 158020 218080 190370 215750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 129780000 30562 4603 28714 57383;57384 46365 46365 1 9606 Homo sapiens -0.0376159382158221 WSPALQIR Unmodified 969.5396 0.53960019 3689 V9HW41;P61088;F8VQQ8;Q5JXB2 HEL-S-71;UBE2N;UBE2NL Ubiquitin-conjugating enzyme E2 N;Putative ubiquitin-conjugating enzyme E2 N-like yes no 0 0 0 3.5 0.5 1 1 52.629 52.671 2 0.0053725 15182 20230619_1883_Aki_TMTPro18x_K_F4 130 49.446 1124100 1004100 920830 923410 1013800 1683900 1112400 1169800 1856600 498260 445990 520210 526470 450990 628730 647020 660820 667080 1038400 918630 954480 949470 1054900 1632100 1137700 1212000 1788600 543520 528130 525460 540550 477890 639390 648040 632000 633360 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 182670000 30563 3689 28715 57385;57386 46366 46366 1 9606 Homo sapiens 0.053611973712804684 WSPIASTLPELVQR Unmodified 1595.8671 0.86714192 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4H4;A0A7I2V4Y9;A8K8J9;H0YI98 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 0 0 2.5 0.5 1 1 62.934 62.954 3 0.0010619 19670 20230619_1882_Aki_TMTPro18x_K_F3 79.885 56.65 79752 61818 92589 88662 79319 86582 83200 92825 107710 110590 98644 102500 134870 101910 117720 111060 97726 107160 73819 56820 92752 87311 83540 87837 84490 94845 108080 110570 103250 104370 135560 105690 118860 111280 93762 101790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 259420000 30564 1406 28716 57387;57388 46367 46367 1 9606 Homo sapiens 0.09304303331759911 WSPLENK Unmodified 872.43922 0.43921744 4304 V9HVZ6;Q92747;Q53GB6;A0A0K0K1L3;Q59GQ0;A0A1W2PNV4;Q92747-2;E9PF58;Q75MY0 HEL-68;ARPC1A Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 8 0 1 51.526 51.603 2 0.002762 14209 20230619_1888_Aki_TMTPro18x_K_F8 123.45 79.004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30565 4304 28717 57389 46368 46368 1 9606 Homo sapiens -0.0021045968237558554 WSQLLANSAAR Unmodified 1215.636 0.63601977 1022;3868 A0A0D9SFF6;A0A0D9SGF6;A0A994J6W3;Q13813-2;A0A0D9SF54;A0A994J4G5;A0A994J498;Q14917;Q13813;A0A384P5S9;A0A024R889;Q13813-3;Q9UG16 SPTAN1;DKFZp564P0562 Spectrin alpha chain, non-erythrocytic 1 no no 0 0 0 5 0 1 55.445 55.509 2 0.00013182 16086 20230619_1885_Aki_TMTPro18x_K_F5 135.16 111.19 144390 129810 140990 125480 155960 182820 174830 161790 196970 55694 50730 49478 54624 41634 91042 55830 55899 46903 133570 118800 143680 127940 161420 180050 175720 163910 193120 62056 59201 50351 57369 43970 89797 55495 53761 44676 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100470000 30566 1022;3868 28718 57390 46369 46369 1 9606 Homo sapiens 0.036827201405458254 WSTLVEDYGMELR Unmodified 1597.7446 0.74464352 1088 A0A0S2Z489;O00232-2;O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 5.5 0.5 1 1 63.818 63.864 2 0.00027412 19677 20230619_1885_Aki_TMTPro18x_K_F5 125.74 101.89 69583 44078 58717 66451 44617 72534 85556 62746 75237 87200 74072 84590 83386 68766 76007 94260 76145 87889 64168 40575 60440 65309 48718 72577 83503 65501 77241 86722 76553 85408 84441 72809 77534 93901 72935 83502 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 190660000 30567 1088 28719 57391;57392 46370 46370 1 9606 Homo sapiens -0.030319014619863083 WTAPEAALYGR Unmodified 1233.6142 0.6142217 3443 P12931;P12931-2;P12931-3;Q9H7V3;B3KPS6;B2RA70;J3QRU1;P06241-3;P06241-2;P06241;P07947 SRC;YES1;FYN Proto-oncogene tyrosine-protein kinase Src;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Fyn;Tyrosine-protein kinase Yes yes no 0 0 0 7.5 0.5 1 1 54.043 54.112 2 0.00069728 15328 20230619_1888_Aki_TMTPro18x_K_F8 128.27 40.962 74880 65171 72017 71167 54075 65027 69859 64713 86016 82729 95958 90401 87486 77122 93518 90092 106920 116460 69245 59710 73122 71340 58083 66236 70049 66655 87063 82888 97590 90994 89874 80710 95712 91803 102240 110300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97006000 30568 3443 28720 57393;57394 46371 46371 1 9606 Homo sapiens 0.0067591539198019746 WTCCALLAGSEYLK Unmodified 1670.7796 0.77964882 3242 O15371-2;O15371-3;O15371;B4E1K8 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 0 0 0 2.5 0.5 1 1 62.829 62.849 3 1.0241E-08 19890 20230619_1881_Aki_TMTPro18x_K_F2 154.1 133.26 166150 144270 156890 166600 157260 165680 184970 183580 181610 193750 175680 164690 193850 164170 169660 205670 188130 190390 153630 132250 160210 166470 163960 168080 184810 186570 185110 194340 181260 168560 196130 171580 174170 205060 179840 180980 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 336610000 30569 3242 28721 57395;57396 46372 46372 1 9606 Homo sapiens -0.02890981925656888 WTCTSSGSSPQYNICEQMIQIR Unmodified 2645.1672 0.1672414 4154 Q7L576;X5D2F4;A0A087WVZ5;B3KWV6;A0A0G2JQT1;A0A0G2JR96 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 2 0 1 61.04 61.051 3 1.548E-24 19062 20230619_1881_Aki_TMTPro18x_K_F2 193.27 180.08 33280 26145 25911 31243 28102 37255 32233 32739 40006 32991 36663 37464 37747 33804 28519 54902 41966 50199 30709 23983 27008 31205 29208 37097 32496 33766 40156 33484 37813 37758 38084 36087 30057 54479 40080 47699 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37891000 30570 4154 28722 57397 46373 46373 1 9606 Homo sapiens -0.08953553364244726 WTELAGCTADFR Unmodified 1425.6347 0.63469914 1479 A8K7T4;A0A384NPY7;Q12907;B4DWN1;A0A8Q3WK65;D6RBV2;D6RIU4;D6RDX1 LMAN2 Vesicular integral-membrane protein VIP36 yes no 0 0 0 6.5 0.5 1 1 58.175 58.236 2 9.8938E-24 17360 20230619_1886_Aki_TMTPro18x_K_F6 253.89 223.64 119700 109790 115030 122070 113790 130790 131480 139000 156510 130500 142610 151890 142670 134090 152840 151170 158210 179150 110730 100590 117280 122440 118840 131790 132340 141200 157370 133020 147080 152630 146200 139790 155530 153210 151470 169780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 336940000 30571 1479 28723 57398;57399 46374 46374 1 9606 Homo sapiens -0.06109282010515926 WTETYVR Unmodified 953.46068 0.46068117 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q86UM1;C9JZG1;C9JQN7 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 6 0.816 1 1 1 45.937 46.02 2 0.0030106 12130 20230619_1886_Aki_TMTPro18x_K_F6 170.72 33.831 511890 418090 469760 480360 514030 579360 559090 541930 649330 536990 519830 476340 568450 447240 535440 586480 576660 543810 473000 383330 481470 481420 531910 577520 563780 556030 651060 541400 541340 485670 576910 469850 547590 584600 551120 517080 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 525760000 30572 487 28724 57400;57401;57402 46375;46376 46375 2 9606 Homo sapiens -0.017910746536585975 WTEYGLTFTEK Unmodified 1373.6503 0.65033243 1286 A0A1L1UHR1;P21796;B3KTS5;C9JI87 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 0 7.5 0.5 1 1 61.832 61.865 2 2.9012E-23 18625 20230619_1887_Aki_TMTPro18x_K_F7 302.25 255.16 805860 731960 946770 964500 952940 1097800 1289000 1211200 1297500 1169600 1141800 1260700 1418400 1205600 1218700 1323400 1163400 1227400 746750 671760 950660 956820 997880 1102200 1280000 1228400 1315100 1187100 1191900 1273700 1429200 1251400 1240300 1322500 1114100 1166600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2005899999.9999998 30573 1286 28725 57403;57404 46377;46378;46379 46378 3 9606 Homo sapiens -0.021546722218317882 WTGMIIGPPR Oxidation (M) 1142.5906 0.59064948 1895;3100 A0M8W4;Q15819;G3V113;Q13404-8;H0YBX6;E5RIF1;D6RG00;I3L0A0;Q13404;Q13404-7;Q13404-2;Q13404-1;G3V2F7 UBE2V2;UBE2V1;TMEM189-UBE2V1 Ubiquitin-conjugating enzyme E2 variant 2;Ubiquitin-conjugating enzyme E2 variant 1 no no 0 1 0 3.5 0.5 1 1 52.687 52.729 2 0.00040985 15202 20230619_1883_Aki_TMTPro18x_K_F4 121.09 110.86 353390 315740 333790 366150 348480 329770 348020 354360 383390 407560 427610 427160 442210 365090 427940 488920 421310 463950 326810 289410 341020 365250 360420 337050 352190 361820 390540 409530 437340 430800 450060 385200 435410 487750 403470 440770 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252790000 30574 1895;3100 28726 57405;57406 46380;46381 46381 1213 2 9606 Homo sapiens 0.02505778353815913 WTGMIIGPPR Unmodified 1126.5957 0.59573486 1895;3100 A0M8W4;Q15819;G3V113;Q13404-8;H0YBX6;E5RIF1;D6RG00;I3L0A0;Q13404;Q13404-7;Q13404-2;Q13404-1;G3V2F7 UBE2V2;UBE2V1;TMEM189-UBE2V1 Ubiquitin-conjugating enzyme E2 variant 2;Ubiquitin-conjugating enzyme E2 variant 1 no no 0 0 0 5.67 0.471 1 2 58.809 58.869 3 4.6819E-06 17427 20230619_1885_Aki_TMTPro18x_K_F5 134.23 98.284 22856 18127 23494 25924 16454 21744 23909 24728 27077 29243 26399 32840 34327 25936 28281 33513 31024 37066 21135 16660 23726 25481 17876 22359 23784 25185 27399 29409 27507 32919 34475 27401 29046 33737 29699 35146 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38171000 30575 1895;3100 28726 57407;57408;57409 46382;46383;46384 46382 3 9606 Homo sapiens 0.03750082216447481 WTLGFCDER Unmodified 1182.5128 0.51279309 1052 A0A0K0K1K7;O95336;M0R261;M0R0U3;M0R1L2 PGLS 6-phosphogluconolactonase yes no 0 0 0 6 0.816 1 1 1 57.106 57.168 2 4.5076E-08 16923 20230619_1886_Aki_TMTPro18x_K_F6 200.88 179.18 222420 199760 210640 217360 190190 215250 233330 234200 235790 252300 266040 274560 266610 233970 275410 293120 302850 317460 205700 183000 214700 218170 200350 218320 232930 238450 241340 254600 271690 276380 272570 245820 281510 294900 289600 301210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 314960000 30576 1052 28727 57410;57411;57412 46385;46386 46386 2 9606 Homo sapiens -0.07116279302226758 WTNQLNSLNQAVVSK Unmodified 1700.8846 0.8845829 3691 Q53HJ0;Q59EL2;P61201;P61201-2;B2R6N0;B4DIH5 COPS2 COP9 signalosome complex subunit 2 yes no 0 0 0 4 0 1 59.882 59.884 3 1.606E-14 18263 20230619_1883_Aki_TMTPro18x_K_F4 156.17 119.73 64435 56759 69486 78088 66781 69892 79916 74545 81694 82580 89328 75035 72618 67452 112760 79898 75584 68006 59648 52121 70179 76985 69868 71405 79879 76082 83412 82788 90550 76305 76545 70448 111730 79545 72626 64746 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 622580000 30577 3691 28728 57413 46387 46387 1 9606 Homo sapiens 0.06217598866737717 WTNYIHGWQDR Unmodified 1474.6742 0.67419619 624 A0A2R8YFI2;A0A2R8YEA4;A0A2R8Y5H3;A0A2R8Y7Q9;A0A2R8YEK8;A0A2R8YE18;A0A2R8Y5S9;A0A024RAJ5;A0A2R8Y7C5;Q9Y5P4-2;Q9Y5P4;Q9Y5P4-3;A0A2R8YCI0 COL4A3BP Collagen type IV alpha-3-binding protein yes no 0 0 0 2 0 1 53.75 53.778 3 0.00017398 16095 20230619_1881_Aki_TMTPro18x_K_F2 101.6 66.874 19681 17881 20947 19886 15868 22303 26738 25813 26203 23708 30954 36128 28016 26304 30126 28805 34005 33319 18221 16383 21104 19966 17199 22439 26315 26077 26880 24441 31451 35766 28805 27573 30803 29167 32494 31601 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58945000 30578 624 28729 57414 46388 46388 1 9606 Homo sapiens -0.044153939447824087 WTSQDSLLGMEFSGR Oxidation (M) 1728.7777 0.77773456 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 1 0 6.5 0.5 1 1 60.075 60.129 2 3.9224E-05 18176 20230619_1886_Aki_TMTPro18x_K_F6 109.6 88.658 126070 107250 131670 128550 96689 102020 114000 107120 111690 157710 170190 146120 153760 132060 145310 188490 152850 164110 116640 98358 132720 127780 103580 105360 114000 110500 116390 156230 170970 148520 157030 139640 148580 187010 146260 156090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158070000 30579 3606 28730 57415;57416 46389;46390 46389 2287 2 9606 Homo sapiens -0.05750319409958138 WTSQDSLLGMEFSGR Unmodified 1712.7828 0.78281994 3606 P49327;A0A0U1RQF0;Q6PJJ3 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 7.5 0.5 1 1 62.409 62.439 3 4.1757E-14 18896 20230619_1887_Aki_TMTPro18x_K_F7 180.27 158.97 169150 149640 152920 154080 123130 152050 146180 126880 129860 224740 194450 203540 211180 175740 179880 227260 189990 201830 156360 137030 156250 155290 130980 153410 145660 134050 136240 221080 197250 206530 213440 184930 184290 226000 181760 191930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 802500000 30580 3606 28730 57417;57418 46391 46391 1 9606 Homo sapiens -0.045060155473265695 WTTEQQQR Unmodified 1075.5047 0.50467125 3065 H3BN98;H3BPJ2;B7Z6R9;A0A024QYV7;Q15041-2;Q15041;Q15041-3 ARL6IP1;hCG_1994130 ADP-ribosylation factor-like protein 6-interacting protein 1 yes no 0 0 0 4 0.816 1 1 1 35.609 35.674 2 0.00025145 7806 20230619_1885_Aki_TMTPro18x_K_F5 168.23 134.15 101770 57776 125850 118530 184370 218960 138330 165930 157800 123110 173420 196430 166660 142650 169240 77391 186850 173160 94112 53449 126680 115880 185720 212370 142850 171900 160170 128990 177080 194030 170420 145560 172480 84507 178510 163500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 264870000 30581 3065 28731 57419;57420;57421 46392;46393 46393 2 9606 Homo sapiens -0.030060902273362444 WVAAVGK Unmodified 729.41736 0.41735979 1674 A0A7I2V5T7;B3KPZ2;Q9H7Z7;A6NHH0;B4DWP1 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes no 0 0 0 3 0 1 50.926 50.997 2 0.011653 14585 20230619_1882_Aki_TMTPro18x_K_F3 123.34 67.942 202970 180310 198980 203960 258710 269500 249010 254420 350670 165380 183900 146770 162860 128760 206510 164180 198680 132380 187750 165250 203390 204950 263790 267250 254600 258500 344210 171720 195430 149470 168980 135300 208530 162800 189720 126320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79736000 30582 1674 28732 57422 46394 46394 1 9606 Homo sapiens 0.0418278035970161 WVDGVDEIQYDVGR Unmodified 1649.7686 0.76855009 2655 O14662;O14662-5;O14662-4;O14662-2;O14662-6;H3BU86;Q59G13;B4E3U3;B7ZBM8;F8W9Z6;E9PND6;H0YEW0;Q96NX8;B7ZBM4;O14662-3;B7ZBM5 STX16;STX16-NPEPL1 Syntaxin-16 yes no 0 0 0 3 0 1 60.878 60.907 2 3.0106E-11 18774 20230619_1882_Aki_TMTPro18x_K_F3 218.62 193.18 17039 12587 15302 18939 16152 20988 16745 18628 18266 20622 20386 24862 23825 21301 22113 21031 20757 25015 15733 11578 15727 18616 16756 20998 16906 19245 18626 20859 21000 24904 24127 22075 22436 21369 19903 23702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6596200 30583 2655 28733 57423 46395 46395 1 9606 Homo sapiens -0.030343447039740568 WVDPNSPVLLEDPVLCALAK Unmodified 2235.1609 0.16094068 3964 Q2XPP3;S4R3Z2;A0A0A0MSS8;P42330;P42330-2 AKR1C3 Aldo-keto reductase family 1 member C3 yes no 0 0 0 8 0 1 66.011 66.03 3 6.7884E-05 20367 20230619_1888_Aki_TMTPro18x_K_F8 82.482 72.733 3528.6 2857.1 13426 10846 27408 18141 8018.5 6240.7 11236 16359 11219 11642 8123.8 9568.2 10449 7226.6 16203 13719 3338.3 2676.1 12986 10367 26729 17539 9317.1 7470.2 11324 15853 11381 11929 8526.2 9819.7 10882 7673.4 15430 12971 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37648000 30584 3964 28734 57424 46396 46396 1 9606 Homo sapiens 0.09276664528852052 WVDWTVSEPR Unmodified 1273.6091 0.60913632 3019 X6RLT1;H0UI80;Q8IXH7-4;Q8IXH7 NELFCD;TH1L Negative elongation factor C/D yes no 0 0 0 5.5 0.5 1 1 59.434 59.491 2 2.2305E-09 17904 20230619_1886_Aki_TMTPro18x_K_F6 200.05 159.7 70979 69586 77123 69224 58377 74145 76170 79407 82938 84338 83566 85054 96321 79236 91617 99237 92176 95964 65760 63680 77516 70082 62654 74738 76026 80874 84158 84981 86295 86141 97656 82995 93319 99200 88214 91168 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61788000 30585 3019 28735 57425;57426 46397 46397 1 9606 Homo sapiens -0.016723884706379977 WVEQHLGPQFVER Unmodified 1623.8158 0.81577505 4267 V9HWF3;Q8TCD5;A0A384NYP3;J3KRC4;J3KSY6 HEL74;NT5C 5'(3')-deoxyribonucleotidase, cytosolic type yes no 0 0 0 6 0 1 51.637 51.714 3 5.8725E-08 14627 20230619_1886_Aki_TMTPro18x_K_F6 155.34 134.38 145920 116630 132780 152780 152610 171050 181120 178730 225080 148950 134570 147280 151710 129550 142520 166110 152050 152180 134810 107080 136430 151540 157810 171710 182200 181260 223010 152220 143180 149010 153920 136130 145750 165500 145380 144690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 691090000 30586 4267 28736 57427 46398;46399 46399 2 9606 Homo sapiens 0.028819793576758457 WVGESER Unmodified 861.39808 0.39808091 573 A0A024R9G7;Q6PL18;Q6PL18-2;Q9ULI0-2;Q9ULI0 ATAD2;ATAD2B ATPase family AAA domain-containing protein 2;ATPase family AAA domain-containing protein 2B yes no 0 0 0 2 0 1 38.854 38.921 2 0.036792 9413 20230619_1881_Aki_TMTPro18x_K_F2 92.187 46.305 116260 95284 105370 105800 104190 120220 109180 117010 143210 120810 147150 128400 130430 116890 119520 137850 164870 133890 107420 87332 107920 106220 108580 120420 110890 119830 144000 122170 149900 129720 133220 122030 124320 137930 157100 127330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106080000 30587 573 28737 57428 46400 46400 1 9606 Homo sapiens -0.03816220721864738 WVGGQHPCFIIAEIGQNHQGDLDVAK Unmodified 2888.4028 0.40279572 4582 Q9NR45;V9HW39 NANS;HEL-S-100 Sialic acid synthase yes no 0 0 0 8 0 1 59.243 59.285 4 2.4673999999999996E-38 17493 20230619_1888_Aki_TMTPro18x_K_F8 197.33 177.84 144650 127900 137380 153600 126250 155350 152760 145640 173300 165170 145980 171340 178970 160420 149490 221800 191720 226740 133770 117280 140110 153030 132890 156710 153120 150040 174370 166100 152680 173310 180340 169060 155270 221930 183270 215180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51714000 30588 4582 28738 57429 46401 46401 1 9606 Homo sapiens 0.03413043147020289 WVHAEMVNK Oxidation (M) 1128.5386 0.53861391 635 A0A024RAV2;P46063;F8WA66;F8WD97 RECQL ATP-dependent DNA helicase Q1 yes no 0 1 0 7.5 0.5 1 1 41.353 41.387 3 0.00013294 9803 20230619_1887_Aki_TMTPro18x_K_F7 129.63 108.12 94392 67079 78336 85957 112180 107270 111650 114550 142000 114340 124120 121610 124000 102730 97131 139040 149850 136440 87087 61602 81460 85540 113780 107050 113500 116470 142150 115820 128130 122560 125340 108520 102380 138860 142770 129670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55718000 30589 635 28739 57430;57431 46402;46403 46402 377 2 9606 Homo sapiens -0.02051385059940003 WVHAEMVNK Unmodified 1112.5437 0.54369929 635 A0A024RAV2;P46063;F8WA66;F8WD97 RECQL ATP-dependent DNA helicase Q1 yes no 0 0 0 8 0 1 45.422 45.45 3 0.0008227 11677 20230619_1888_Aki_TMTPro18x_K_F8 102.01 86.745 133470 107580 123110 122660 146250 155200 170420 160750 185280 160980 155640 152230 182320 148380 146100 183580 183450 172450 123320 98631 126290 123120 150690 154630 170810 163810 186720 162470 162210 154880 183510 155080 151460 183190 175080 163960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152860000 30590 635 28739 57432 46404 46404 1 9606 Homo sapiens -0.00807081197331172 WVHQACLQR Unmodified 1196.5873 0.58729544 4619 Q9NX47 MARCH5 E3 ubiquitin-protein ligase MARCH5 yes yes 0 0 0 3 0 1 37.861 37.914 3 0.00095586 8754 20230619_1882_Aki_TMTPro18x_K_F3 84.743 61.186 19184 16461 24728 23705 30919 30644 30207 33889 36939 22602 29001 28573 21819 21666 30821 20015 30027 24908 17787 15125 24745 23438 31570 30530 30707 34077 36874 23643 29828 28502 22949 22478 31076 20453 28702 23625 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37314000 30591 4619 28740 57433 46405 46405 1 9606 Homo sapiens -0.0031347170020126214 WVIYNDQK Unmodified 1064.5291 0.52909508 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 8 0 1 53.949 54.02 2 0.00087441 15276 20230619_1888_Aki_TMTPro18x_K_F8 171.38 110.7 132130 114340 136660 138710 138390 163040 163680 156160 172400 163070 185820 173520 181800 154530 166830 192450 188500 182970 122250 104860 138520 138420 144330 162840 163850 160200 175610 164770 189760 175150 184970 162020 171240 192190 180100 173900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59683000 30592 1213 28741 57434 46406 46406 1 9606 Homo sapiens -0.0005883007381726202 WVNDPHR Unmodified 922.44095 0.44094878 2384 B3KQJ9;B3KS18;B4DDX1;B3KQ71;B4DWL6;Q9H4A6 GOLPH3 Golgi phosphoprotein 3 yes no 0 0 0 5 0.816 1 1 1 33.597 33.657 3 0.0053884 7069 20230619_1885_Aki_TMTPro18x_K_F5 99.375 54.654 29379 17811 26619 25676 25869 46812 29425 27360 54619 23923 26258 24641 21898 20733 21177 24488 30824 30380 27101 16390 27276 25536 27232 45222 30208 29198 52969 24475 28061 24860 22495 21715 22097 24865 29396 28794 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48640000 30593 2384 28742 57435;57436;57437 46407 46407 1 9606 Homo sapiens -0.02337405873777243 WVNPHKL Unmodified 892.49192 0.49192172 1464 P11413-2;E7EUI8;A0A384NL00;A8K8D9;A0A8G1M3Q3;P11413;Q2Q9H2;P11413-3;Q2VF42;Q2Q9B7;A0A8Q3WL95;A0A8Q3SJB9;Q0PHS4 G6PD Glucose-6-phosphate 1-dehydrogenase yes no 0 0 1 3 0 1 44.974 45.047 3 0.018271 11857 20230619_1882_Aki_TMTPro18x_K_F3 83.614 60.685 226120 181370 184870 169620 295540 389880 264140 232290 398430 77956 67440 78798 79951 60029 130750 79848 80040 66250 208750 166010 192910 175150 298260 373770 271820 244000 384120 87905 85497 79418 83694 63600 128970 79334 76976 63119 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 155230000 30594 1464 28743 57438 46408 46408 1 9606 Homo sapiens 0.04137543171088964 WVPAGGSTGFSR Unmodified 1220.5938 0.5938206 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A075B6E5 ENAH Protein enabled homolog yes no 0 0 0 3.5 0.5 1 1 49.516 49.572 2 3.3102E-09 13910 20230619_1882_Aki_TMTPro18x_K_F3 175.41 141.49 203240 172650 196940 205690 183630 232660 232230 211300 250210 235560 231050 214420 262440 217110 238590 281890 278050 279290 187930 158330 200500 205380 193320 232680 231850 218040 253130 236210 239250 218900 265730 227360 245440 281940 265660 265290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 259960000 30595 918 28744 57439;57440 46409 46409 1 9606 Homo sapiens -0.007652552678109714 WVPEITHHCPK Unmodified 1402.6816 0.68158975 614 A0A024RAA5;P60953;B4E1U9;P60953-1;A0A8Q3WLC5;B7ZAY4;B4DMH5;A0A024R9T1;A0A024RAE6;A0A590UJK8;A0A8Q3SI43;Q5JYX0;Q9UJM1;A0A494BZX6;Q9UJM0;A0A494C1M1 CDC42;hCG_39634 Cell division control protein 42 homolog yes no 0 0 0 4.5 3.5 1 1 42.944 42.949 4 0.00043986 11386 20230619_1880_Aki_TMTPro18x_K_F1 103.08 87.939 731000 556260 595960 638930 583410 657270 652590 673850 737170 806900 749660 797690 894400 708580 725540 815610 777110 879280 674600 510140 616670 638910 609370 663760 656810 690750 747380 807890 775130 806860 899810 739930 744110 821210 743740 834090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1729899999.9999998 30596 614 28745 57441;57442 46410;46411 46410 2 9606 Homo sapiens -0.0036437766873405053 WVPFDGDDIQLEFVR Unmodified 1834.889 0.88899957 619 A0A0C4DGS1;A0A024RAD5;P39656;P39656-3;P39656-2 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 0 4.5 0.5 1 1 64.748 64.775 3 1.4354E-25 20058 20230619_1885_Aki_TMTPro18x_K_F5 234.85 216.89 18572 13510 19596 20570 16462 17905 22839 22115 20622 27952 32476 32690 35577 30736 28152 37725 30299 38637 17169 12430 19783 20156 17501 18398 22603 22464 21626 28062 32895 32921 35854 32136 28933 37819 29027 36658 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96178000 30597 619 28746 57443;57444 46412 46412 1 9606 Homo sapiens 0.0049506328962252155 WVPPLIGELYGLR Unmodified 1511.85 0.85003529 4639 Q9P0J0;Q9P0J0-2 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes no 0 0 0 5 0 1 66.083 66.126 3 0.013429 20640 20230619_1885_Aki_TMTPro18x_K_F5 63.76 40.741 3462 4359.4 4476.3 5927.6 4325.1 5178.1 3962 4485 6751.6 4351.6 5268.3 5440 3855.4 3818.6 6680.2 4410.7 6294.4 6847.5 3219.7 3998.5 4468.9 5843.4 4500.9 5275.6 4103.9 4629.1 6650.9 4442.9 5418.4 5417.1 4118.8 4024.7 6709.4 4565.4 6030 6476 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10678000 30598 4639 28747 57445 46413 46413 1 9606 Homo sapiens 0.1145842751661803 WVPVTEPK Unmodified 954.51747 0.51746776 3979 Q4VC05;Q4VC05-2 BCL7A B-cell CLL/lymphoma 7 protein family member A yes no 0 0 0 7.5 0.5 1 1 52.395 52.47 2;3 0.029599 14600 20230619_1888_Aki_TMTPro18x_K_F8 89.142 50.351 120140 98550 132610 146840 125460 150230 129240 130660 155910 161410 179110 182180 178700 159910 158670 171870 254460 195720 111190 90605 133650 144280 131080 151140 131000 135700 158280 162120 182650 183220 181600 166310 167020 173830 242130 185860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181290000 30599 3979 28748 57446;57447 46414;46415 46415 2 9606 Homo sapiens 0.0383897290286086 WVSELSYVEEK Unmodified 1367.6609 0.66089712 1588 Q15154;Q15154-5;H0YBA1;D3DSQ0;A0A5H1ZRS1;B9EIS5;A2RUU9;Q15154-2;Q15154-4;A0A4W8VX11;Q9P1R8 PCM1 Pericentriolar material 1 protein yes no 0 0 0 4 0 1 61.89 61.895 3 0.0021497 19167 20230619_1883_Aki_TMTPro18x_K_F4 79.659 69.049 22094 17457 20220 24056 21012 23439 23265 24257 25605 31452 31531 29815 30954 26789 27035 29659 29500 31248 20411 16037 20732 23736 21830 23764 23410 24915 26215 31338 32031 30234 31423 27889 27712 29843 28213 29656 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103210000 30600 1588 28749 57448 46416 46416 1 9606 Homo sapiens -0.008226895673715262 WVSSLAVHPAGDNVICGSYDSK Unmodified 2361.1059 0.10594499 2320 B2RDN4;Q14137;B4DEN9;Q14137-2;Q4G0D9;Q6DKJ9 BOP1 Ribosome biogenesis protein BOP1 yes no 0 0 0 8 0 1 57.271 57.323 3 1.0557E-08 16706 20230619_1888_Aki_TMTPro18x_K_F8 115.39 103.65 36041 31946 30946 35218 32851 40982 35960 41114 32845 42365 36525 37912 40399 32355 27805 40730 45189 44067 33305 29270 31920 35382 34092 41002 36005 42002 33846 42581 37469 38491 40513 34024 29525 40940 43061 41823 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50017000 30601 2320 28750 57449 46417 46417 1 9606 Homo sapiens -0.02016374009735955 WVTTASLLDYDTVAGADK Unmodified 1924.9418 0.941823 3931 Q15393;A8K6V3;B3KQH1;B3KM77;Q15393-3 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 7 0 1 63.486 63.518 3 0.00017126 19448 20230619_1887_Aki_TMTPro18x_K_F7 81.656 65.89 620400 475890 562410 590820 490540 647510 634230 729720 602720 709890 640250 664700 700200 747790 783170 828640 759390 878240 573000 436760 575390 588140 519840 652000 630620 738830 617950 716860 658340 679870 717700 772400 793910 834080 727630 833190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1403900000 30602 3931 28751 57450 46418 46418 1 9606 Homo sapiens 0.016349765618087986 WVTYFNKPDIDAWELR Unmodified 2052.0105 0.010511692 3068 H3BNX8;P20674;H3BRI0 COX5A Cytochrome c oxidase subunit 5A, mitochondrial yes no 0 0 1 2 0 1 63.094 63.103 3 2.1176E-14 20035 20230619_1881_Aki_TMTPro18x_K_F2 178.02 156.62 84367 73385 89681 102630 75291 105560 92437 97967 126990 91702 104250 124360 118820 123810 129640 111460 108630 128820 78083 67404 90548 101240 80026 106260 93295 100470 126380 94107 108850 124700 121460 126980 130380 113260 104280 122100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 63289000 30603 3068 28752 57451 46419 46419 1 9606 Homo sapiens 0.0265868565220444 WVVIGDENYGEGSSR Unmodified 1666.7587 0.75871368 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;B4DEC3;Q71UF1;B4DW08;O75944 ACO2;ACON Aconitate hydratase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 56.2 56.222 2 6.2182E-33 16752 20230619_1883_Aki_TMTPro18x_K_F4 302.09 283.65 65362 54943 59838 65719 64475 73482 79343 78982 80105 84797 98597 96075 93760 80545 95465 96347 101570 116040 60407 50389 61366 65599 67013 73839 79168 80456 82293 85700 100080 96522 95926 84458 97392 97659 97219 109950 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 126610000 30604 1050 28753 57452;57453 46420;46421 46421 2 9606 Homo sapiens -0.04799532709375853 WVYGPGGAR Unmodified 961.477 0.47699993 3320 O75935-3;O75935;X6RA56;X6RCK5;A0A0A0MRV8;Q8NB28;X6RLR1;O75935-2 DCTN3 Dynactin subunit 3 yes no 0 0 0 3 0 1 46.269 46.347 2 0.0034394 12475 20230619_1882_Aki_TMTPro18x_K_F3 97.075 79.689 183500 167260 199100 196250 223340 222640 220370 196070 226250 239710 255780 221490 235740 189250 261010 232640 226660 231750 169920 153320 201280 196190 229720 222640 222570 203360 231430 239360 260020 224670 242290 198650 262920 233140 217240 220110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123040000 30605 3320 28754 57454 46422 46422 1 9606 Homo sapiens -0.005279486969016034 WWDLDTQHCFK Unmodified 1534.6663 0.66633362 4064 Q5TDG3;Q9UNX4 WDR3 WD repeat-containing protein 3 yes no 0 0 0 8 0 1 58.833 58.875 3 0.0023915 17382 20230619_1888_Aki_TMTPro18x_K_F8 77.305 65.14 31602 25901 28525 29420 26191 32912 29057 30552 38928 34513 33999 31892 34921 28083 35580 40282 40282 37398 29198 23745 29205 29476 27524 32959 29444 31475 38895 34601 35144 32387 35642 29746 36453 40106 38476 35562 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 244210000 30606 4064 28755 57455 46423 46423 1 9606 Homo sapiens -0.07961289256604687 WWEQTDLTK Unmodified 1205.5717 0.57168818 1188 A0A140VJN3;Q9H9A6 LRRC40 Leucine-rich repeat-containing protein 40 yes no 0 0 0 7 0 1 59.623 59.669 2 0.00076737 17672 20230619_1887_Aki_TMTPro18x_K_F7 134.68 97.485 49309 43541 49648 46114 47317 55867 49755 50741 60489 63206 59525 54370 69523 58196 56182 61414 59897 65209 45620 39880 50350 46517 49441 55647 50378 52506 61021 62956 61509 55731 69994 60101 57599 61867 57310 61876 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17924000 30607 1188 28756 57456 46424 46424 1 9606 Homo sapiens -0.02287479736264686 WWGLQSK Unmodified 903.46029 0.46028724 3601 P48739;P48739-2;P48739-3;B2R7P6;B3KVT6 PITPNB Phosphatidylinositol transfer protein beta isoform yes no 0 0 0 4.5 0.5 1 1 58.122 58.151 3 0.026521 17583 20230619_1883_Aki_TMTPro18x_K_F4 70.912 22.118 53909 44097 53613 50051 40788 51467 55050 57390 59046 50589 45581 45934 46226 41057 50171 47395 51156 48664 49845 40425 54281 50112 43811 52063 54822 58029 59372 51351 47451 46674 47366 42848 50985 47610 48919 46217 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38318000 30608 3601 28757 57457;57458 46425 46425 1 9606 Homo sapiens 0.0046955041713090395 WWIETCK Unmodified 1021.4691 0.46913736 4347 Q99575;Q96F88 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 0 0 0 1.5 0.5 1 1 59.21 59.216 3 0.0045559 18300 20230619_1881_Aki_TMTPro18x_K_F2 105.12 56.477 19282 23161 23312 23373 18845 21628 25218 20941 23966 26867 23442 23828 27966 26195 23447 26031 27986 29711 17913 21185 23283 23581 20084 22002 25017 21616 24488 26745 24279 24398 28204 26935 24186 26362 26745 28175 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43378000 30609 4347 28758 57459;57460 46426 46426 1 9606 Homo sapiens -0.04073844008701144 WYAGLQK Unmodified 864.44939 0.4493882 2187 B1AH87;Q13850;P30536;O76068 TSPO;PBR Translocator protein yes no 0 0 0 3 0 1 53.199 53.258 3 0.016975 15612 20230619_1882_Aki_TMTPro18x_K_F3 76.592 13.75 37610 26724 29228 31383 40108 43034 45160 41397 59950 26395 28464 27329 37290 27641 28396 40161 42793 35265 34685 24520 30572 31468 40969 42593 45641 42003 58874 27583 31057 27766 37364 29176 29886 39844 40753 33575 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10761000 30610 2187 28759 57461 46427 46427 1 9606 Homo sapiens 0.011741480428554496 WYENFQR Unmodified 1041.4668 0.46682918 3995 Q53FT3 C11orf73 Protein Hikeshi yes yes 0 0 0 7.5 0.5 1 1 50.479 50.558 2 0.043195 13776 20230619_1888_Aki_TMTPro18x_K_F8 94.662 62.727 461810 369790 437830 481930 450420 543500 497370 503960 570930 556090 513000 491060 564210 449540 480950 630250 629440 586890 426780 339490 447280 478190 468610 543840 501080 518900 575380 557300 531120 500330 570270 474810 499530 627520 600510 558050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 227380000 30611 3995 28760 57462;57463 46428 46428 1 9606 Homo sapiens -0.05224556422149362 WYHPGCFVK Unmodified 1192.5488 0.54878467 261 A0A024R3T8;P09874;B4E0E1;B2R5W3;A0A7I2V3E1;A0A7I2V625;A0A7I2V5E9;Q05D33;Q6PJL0 PARP1 Poly [ADP-ribose] polymerase 1 yes no 0 0 0 3.5 0.5 1 1 49.557 49.592 3 0.00020205 13754 20230619_1883_Aki_TMTPro18x_K_F4 125.96 101.62 557920 376190 487410 541100 510720 534920 536630 573880 580130 406640 339620 275070 353340 296310 499090 405270 360270 287680 514790 346000 501600 532700 529290 542150 540960 579040 578660 416170 360360 286410 367080 310680 496740 399280 345540 274750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 715390000 30612 261 28761 57464;57465 46429;46430 46430 2 9606 Homo sapiens -0.03978777334714323 WYLATSDK Unmodified 982.476 0.47599688 11 A0A2R8YGH5;A0A024QYT6;P61966;H7C1E4;P61966-2 AP1S1 AP-1 complex subunit sigma-1A yes no 0 0 0 1 0 1 54.447 54.447 3 0.071876 16183 20230619_1880_Aki_TMTPro18x_K_F1 49.418 32.491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30613 11 28762 57466 46431 46431 1 9606 Homo sapiens -0.015942078564762596 WYPEEYEFAPK Unmodified 1457.6503 0.65033243 2964 H0YG54;H0YGR4;F5GYG5;Q9Y3B8-2;Q9Y3B8-3;Q9Y3B8 REXO2 Oligoribonuclease, mitochondrial yes no 0 0 0 5 0 1 61.347 61.398 3 1.6964E-05 18517 20230619_1885_Aki_TMTPro18x_K_F5 117.7 113.15 124030 97456 111780 114060 98220 107900 126230 125570 146340 160530 136390 135550 184900 128960 113420 194960 187180 181740 114570 89381 114380 113800 103890 110010 126280 127980 147710 159570 142440 138590 183670 136880 121110 193830 178340 172770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 176920000 30614 2964 28763 57467 46432 46432 1 9606 Homo sapiens -0.06018672221807719 WYQMGAYQPFFR Unmodified 1592.7235 0.72345457 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 6 0 1 63.174 63.223 2 0.0042423 19547 20230619_1886_Aki_TMTPro18x_K_F6 115.86 98.425 77611 61501 73478 71950 60588 74136 65128 70453 80731 55702 56218 52558 56813 49078 61925 61604 79179 56076 71719 56403 74777 71858 64171 74708 65926 71836 80311 57038 58853 53425 58253 51395 63818 61402 75431 53405 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64266000 30615 3900;2497 28764 57468 46433 46433 1 9606 Homo sapiens -0.04919821980206507 WYQMGIVSWGEGCDRDGK Oxidation (M) 2158.9201 0.92005848 2771 CON__P00735;B4DDT3;E9PIT3;P00734;Q86WA1;Q8TD58 F2 Prothrombin;Activation peptide fragment 1;Activation peptide fragment 2;Thrombin light chain;Thrombin heavy chain yes no 0 1 1 7 0 1 56.548 56.606 3 2.2525E-06 16428 20230619_1887_Aki_TMTPro18x_K_F7 107.62 93.608 + 15539 13989 18617 19523 35674 41351 32703 28451 48662 63699 109870 180670 63126 99417 114690 76188 95356 151930 14401 12847 18930 19526 35659 39854 33646 30950 51039 65970 108350 174990 68621 103790 114460 81306 91814 143290 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67074000 30616 2771 28765 57469 46434 46434 1652 1 9606 Homo sapiens -0.1130447473001368 WYQMGIVSWGEGCDRDGK Unmodified 2142.9251 0.92514386 2771 CON__P00735;B4DDT3;E9PIT3;P00734;Q86WA1;Q8TD58 F2 Prothrombin;Activation peptide fragment 1;Activation peptide fragment 2;Thrombin light chain;Thrombin heavy chain yes no 0 0 1 8 0 1 61.166 61.199 3 2.9536E-06 18274 20230619_1888_Aki_TMTPro18x_K_F8 98.572 94.819 + 26079 23777 31244 33586 33979 42628 34321 29834 66554 115810 122250 281020 127390 175420 188120 117090 164350 304500 24171 21838 31372 33206 35180 42127 35602 33755 68392 117320 124240 273370 133150 181200 188560 129300 158450 286710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83822000 30617 2771 28765 57470 46435 46435 1 9606 Homo sapiens -0.10060170867427587 WYYNAAGFNK Unmodified 1232.5615 0.56145784 2203;3454 B2R4A2;P14927;B7Z2R2;P14927-2 UQCRB Cytochrome b-c1 complex subunit 7 no no 0 0 0 3.5 0.5 1 1 57.514 57.532 3 0.0033793 17285 20230619_1883_Aki_TMTPro18x_K_F4 74.173 50.568 133850 103010 131740 126780 143150 210580 175710 193610 243450 145740 121650 118280 172970 126500 156270 168130 154500 145080 123710 94533 134250 127190 149190 205990 177270 197490 239090 149250 132780 121730 174030 132520 159160 166970 147770 138080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134360000 30618 2203;3454 28766 57471;57472 46436 46436 1 9606 Homo sapiens -0.045520426708208106 YAAASLPPLPR Unmodified 1154.6448 0.64479354 2978 F6TR53;Q9H7U7;Q53T59;B5MC96 HS1BP3 HCLS1-binding protein 3 yes no 0 0 0 3 0 1 52.546 52.605 2 0.0025399 15335 20230619_1882_Aki_TMTPro18x_K_F3 93.598 69.262 84505 77015 85893 96841 102290 110630 97540 96171 128670 94101 94040 95864 102000 87300 107060 98948 107770 99974 78206 70645 87446 96325 104850 110500 99558 99207 127870 95359 98501 96951 104110 90953 108770 99342 103050 94974 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78612000 30619 2978 28767 57473 46437 46437 1 9606 Homo sapiens 0.07365693777023807 YAACNAVGQMATDFAPGFQK Oxidation (M) 2161.9561 0.95610963 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6 IPO5;RANBP5 Importin-5 yes no 0 1 0 1 0 1 56.676 56.676 3 2.6181E-08 17132 20230619_1880_Aki_TMTPro18x_K_F1 114.52 105.92 26132 21713 22543 29983 26047 20867 24707 26704 26355 32093 31717 30239 28667 27026 27490 35326 30294 34775 24138 19944 23283 29471 26687 21947 25055 27029 27000 32069 32147 30683 29316 28413 28176 35311 28989 33018 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 80884000 30620 782 28768 57474 46438;46439 46438 476 2 9606 Homo sapiens -0.07839017553214944 YAACNAVGQMATDFAPGFQK Unmodified 2145.9612 0.96119501 782 O00410-3;O00410;A0A024RDY0;O00410-2;H0Y8C6;B4E0R6;B3KWG6 IPO5;RANBP5 Importin-5 yes no 0 0 0 2 0 1 62.097 62.107 3 6.3277E-16 19536 20230619_1881_Aki_TMTPro18x_K_F2 145.69 133.73 213450 177450 202620 192050 163450 205580 220860 234230 242780 295880 257440 260500 306900 248860 263090 338710 302770 321520 197310 162590 206120 193100 174640 207520 220140 238830 247010 294520 265630 265720 309520 261930 270910 337720 289430 305490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 236480000 30621 782 28768 57475 46440;46441 46440 2 9606 Homo sapiens -0.0659471369062885 YAALSVDGEDENEGEDYAE Unmodified 2074.8127 0.8127189 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;B4DS01 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 0 1 0 1 58.397 58.397 2 5.1573E-24 17855 20230619_1880_Aki_TMTPro18x_K_F1 196.76 192.3 27731 22740 27017 28905 23759 30952 25941 32366 29311 48321 42298 46336 48120 36447 34885 55074 47397 43401 25637 20869 27469 28713 25038 31165 26173 33367 30283 47870 43052 46782 48273 38910 36508 54331 45200 41361 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 134330000 30622 2578 28769 57476 46442 46442 1 9606 Homo sapiens -0.18169494649555418 YAALYQPLFDK Unmodified 1327.6812 0.68123863 717 Q99733-2;Q99733;B4DS05;B7ZB83;B7ZAK9;A0A024RCC9;A0A2U9QGI0;C9JZI7;A0A994J3W0;B7ZAC7;A0A0J9YXQ2;C9J6D1;E9PKT8;A8MXH2;E9PNJ7;E9PS34;E9PJJ2;E9PNW0 NAP1L4 Nucleosome assembly protein 1-like 4 yes no 0 0 0 1.5 0.5 1 1 62.371 62.376 3 0.00039781 19698 20230619_1881_Aki_TMTPro18x_K_F2 83 66.227 580480 441750 476140 495430 386190 503870 585200 511270 568840 619280 627220 617190 668530 498310 610140 678570 635690 659290 535720 405040 491290 496250 414290 509000 577920 524930 582900 619840 642590 622720 677700 527800 623260 677710 608140 626310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 674400000 30623 717 28770 57477;57478 46443 46443 1 9606 Homo sapiens 0.03050525883077171 YAAPEQNNDPQQSK Unmodified 1588.7118 0.71176349 962 A0A0A0MTB8;Q8NI36 WDR36 WD repeat-containing protein 36 yes no 0 0 0 4 0 1 38.523 38.566 3 0.070737 8980 20230619_1883_Aki_TMTPro18x_K_F4 40.025 26.888 20069 14680 20670 23772 28082 31821 26525 25927 35784 27238 32035 31945 32798 31025 30087 28327 39352 34972 18549 13517 21080 23343 28560 31414 27110 26929 35753 27631 33074 32182 33354 31886 31140 28892 37532 33162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17235000 30624 962 28771 57479 46444 46444 1 9606 Homo sapiens -0.059043922604814725 YAAVHVHTNAAR Unmodified 1308.6687 0.66871688 1894 A0M8Q2;Q6IPC0;P49593;B5MCT7;P49593-2;B3KX06;Q0VGL7;A8MX49;C9J2F3 PPM1F Protein phosphatase 1F yes no 0 0 0 1 0 1 29.112 29.112 4 6.3381E-13 5648 20230619_1880_Aki_TMTPro18x_K_F1 159.09 145.37 14484 13454 12728 15027 20210 19535 18036 18952 25601 13291 17064 17114 17677 13112 16000 12547 18940 14467 13391 12327 13200 15107 20337 19406 18533 19246 25270 13874 17934 17065 17935 13636 16440 12740 18063 13737 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13881000 30625 1894 28772 57480 46445 46445 1 9606 Homo sapiens 0.026729272634156587 YAAVTQFEATDAR Unmodified 1441.6838 0.68375782 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;B3KU93;A0A8V8TQ95;B3KTP2;A6NEC2;E9PPZ2;B7Z6T6;A0A7I2V604;E9PP11 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 4 0 1 50.078 50.113 2 2.6713E-10 14035 20230619_1883_Aki_TMTPro18x_K_F4 211.37 195.48 151230 129160 129880 156460 114380 153320 167300 163220 155500 176730 192100 196060 200040 164800 175480 227690 229390 226200 139720 118460 133700 155720 121650 155440 165280 166460 160580 178390 195760 197190 202750 174360 182130 227530 218930 214870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 205660000 30626 2933 28773 57481 46446 46446 1 9606 Homo sapiens -0.01941670449900812 YAAVTQFEATDARR Unmodified 1597.7849 0.78486885 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;B3KU93;A0A8V8TQ95;B3KTP2;A6NEC2;E9PPZ2;B7Z6T6;A0A7I2V604;E9PP11 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 1 7 0 1 44.768 44.853 3 2.22E-06 11271 20230619_1887_Aki_TMTPro18x_K_F7 129.04 117.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30627 2933 28774 57482 46447 46447 1 9606 Homo sapiens 0.00988781252794979 YACGLWGLSPASR Unmodified 1436.6871 0.68706906 322;3094 H7C561;H7C0N4;Q15637-6;A0A024R566 SF1 Splicing factor 1 no no 0 0 0 5 0 1 58.479 58.535 2 9.8877E-05 17303 20230619_1885_Aki_TMTPro18x_K_F5 137.46 126.1 48586 40280 48234 42127 64513 76634 55496 54442 66472 44807 42473 45435 43196 38755 47480 51277 48887 57124 44927 36897 49241 42856 65540 74357 56800 56866 66104 45881 44776 45882 44298 40863 48307 51638 46819 54165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16728000 30628 3094;322 28775 57483 46448 46448 1 9606 Homo sapiens -0.013806988768919837 YADAQLSCQGR Unmodified 1267.5615 0.5615342 4459 Q9BWP8-8;Q9BWP8-7;Q9BWP8-6;Q9BWP8-5;Q9BWP8-4;Q9BWP8-3;Q9BWP8-2;Q9BWP8-9;Q9BWP8;Q9BWP8-10 COLEC11 Collectin-11 yes no 0 0 0 5 0 1 38.538 38.63 2 9.868E-06 8968 20230619_1885_Aki_TMTPro18x_K_F5 147.73 130.79 17886 13252 19281 18444 21832 29849 27241 26894 33571 24439 29971 34120 26842 31548 38028 25467 30654 35939 16539 12179 19518 18346 22668 29224 27336 27604 33652 25148 30835 34091 28079 32275 37998 26321 29438 34005 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27068000 30629 4459 28776 57484 46449 46449 1 9606 Homo sapiens -0.06154410733142868 YADEEIPR Unmodified 991.46108 0.4610751 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 1 0 1 41.125 41.125 2 0.00050031 10579 20230619_1880_Aki_TMTPro18x_K_F1 128.1 109.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30630 3299 28777 57485 46450 46450 1 9606 Homo sapiens -0.03499699724466154 YADFAPSLLQVWK Unmodified 1536.7977 0.79766537 4541 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 0 3 0 1 64.719 64.751 3 0.02594 20449 20230619_1882_Aki_TMTPro18x_K_F3 54.005 40.868 9585 7967.1 12605 10059 11409 9647.6 11657 13802 13740 14630 16298 17299 15338 11586 13149 17359 14039 18890 8887 7310.9 12515 9992.9 11922 9889.9 11818 13827 13985 14809 16562 17248 15569 12452 13485 17421 13457 17908 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15040000 30631 4541 28778 57486 46451 46451 1 9606 Homo sapiens 0.050738443829914104 YADLLLEK Unmodified 963.5277 0.5276981 2446 Q99459;B3KY60;B4DSH1 CDC5L Cell division cycle 5-like protein yes no 0 0 0 5.5 0.5 2 2 60.675 60.729 2;3 0.0027377 18414 20230619_1886_Aki_TMTPro18x_K_F6 121.96 58.47 114300 95374 99886 113950 108120 132930 118310 116390 136530 124800 127390 121140 135980 112800 137390 147080 127900 135170 105590 87469 102890 113790 112090 132570 119260 120280 137680 125610 131500 122940 138550 118450 139220 146560 122520 128480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 271420000 30632 2446 28779 57487;57488;57489;57490 46452;46453 46453 2 9606 Homo sapiens 0.04447535837425676 YADLPGIAR Unmodified 974.51853 0.5185304 1406 Q13561-2;Q13561-3;Q13561;Q53H88;V9HW58;A0A384MDU9;A0A7I2V4H4;F8W1I6;A0A7I2V390;F8VW18;F8VRV7;A0A7I2V2Z2;F8W0U6 DCTN2;HEL-S-77 Dynactin subunit 2 yes no 0 0 0 6.5 0.5 1 1 49.758 49.838 2 0.00010386 13496 20230619_1887_Aki_TMTPro18x_K_F7 155 126.89 507750 445400 488310 550090 462290 590460 562100 547780 661980 714680 771410 753520 791710 685510 696740 871770 833380 846450 469570 408540 497770 547400 485690 592870 564150 567100 673250 714520 787000 761190 803030 719110 718680 871120 796150 804180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 294310000 30633 1406 28780 57491;57492 46454 46454 1 9606 Homo sapiens 0.030251872717599326 YADLSDAANR Unmodified 1094.4993 0.49925152 2433 B3KWQ6;P41219;P41219-2;F8W835;H7C5W5 PRPH Peripherin yes no 0 0 0 3 0.816 1 1 1 41.845 41.905 2 3.3523E-26 10401 20230619_1882_Aki_TMTPro18x_K_F3 274.55 246.04 1337100 952260 1100700 1151600 1062100 1162200 1166800 1172200 1395000 1620600 1937600 2119100 1844200 1765700 1804900 1959500 2259100 2188800 1233600 873990 1137400 1147000 1109900 1175000 1178200 1209200 1430200 1628500 1959700 2116100 1884900 1842300 1861900 1978500 2156600 2076800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3013199999.9999995 30634 2433 28781 57493;57494;57495 46455;46456;46457 46456 3 9606 Homo sapiens -0.044218138098358395 YADLSHNR Unmodified 974.45699 0.45699277 3650 P54136;P54136-2;B4DXW6 RARS Arginine--tRNA ligase, cytoplasmic yes no 0 0 0 4.5 1.12 1 1 1 1 31.758 31.821 3 2.2109E-11 6208 20230619_1883_Aki_TMTPro18x_K_F4 211.39 190.83 79131 51402 75247 90198 158910 108040 121390 100770 133760 74062 87618 120650 85884 84511 92689 59524 100240 83957 73046 47406 78041 88049 156900 107840 124810 102830 133590 77797 92253 118960 88138 86983 94351 61725 95719 79543 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 229520000 30635 3650 28782 57496;57497;57498;57499 46458;46459 46458 2 9606 Homo sapiens -0.03125744427529753 YADLTEDQLPSCESLK Unmodified 1867.851 0.85095909 3475 Q6P6D7;Q6FHU2;Q53G35;P18669;Q0D2Q6;Q6FHK8;B4DKL5;B4DMJ7 PGAM1;hCG_2015269 Phosphoglycerate mutase;Phosphoglycerate mutase 1 yes no 0 0 0 3.75 1.48 1 1 1 1 57.544 57.574 3 1.3802E-08 17439 20230619_1882_Aki_TMTPro18x_K_F3 139.58 123.7 401780 320180 358270 409280 288700 354140 391450 386110 385310 487400 458040 476390 550490 458100 420790 575320 493270 552470 371120 293890 366870 405280 308420 362970 388720 395070 396320 486610 470620 483550 552670 479390 435050 574510 471670 524770 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 6059999999.999999 30636 3475 28783 57500;57501;57502;57503 46460;46461;46462 46461 3 9606 Homo sapiens -0.04825235477960632 YADQEVPR Unmodified 976.46141 0.46140945 3886 Q14315;Q14315-2;Q59H94 FLNC Filamin-C yes no 0 0 0 2 0 1 36.642 36.7 2 0.014615 8364 20230619_1881_Aki_TMTPro18x_K_F2 85.731 56.644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30637 3886 28784 57504 46463 46463 1 9606 Homo sapiens -0.02776280004616183 YADVIVHR Unmodified 971.51886 0.51886475 2170 A8QI98;Q9Y2L1;Q49AG4;G3V1J5;Q9Y2L1-2;A0A024R643 DIS3;KIAA1008 Exosome complex exonuclease RRP44 yes no 0 0 0 6.5 0.5 1 1 39.727 39.803 3 0.00070238 9444 20230619_1886_Aki_TMTPro18x_K_F6 125.96 71.554 71657 52851 65179 62560 86739 79789 80844 81101 121740 53924 57907 56914 61311 48441 64022 67601 64934 56113 66169 48490 67041 62635 88198 79444 83050 82019 118950 56181 62564 57418 62607 51256 65121 66975 62058 53450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77247000 30638 2170 28785 57505;57506 46464 46464 1 9606 Homo sapiens 0.03196606991616591 YAEAVTR Unmodified 808.40792 0.40791731 3374 V9HWF4;P00558;P00558-2;B4E1H9;B4DHM5;B4DHB3 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 4 0.816 1 1 1 35.288 35.353 2 0.013637 7666 20230619_1883_Aki_TMTPro18x_K_F4 113.7 30.082 529240 277450 733440 696000 938200 1037500 724590 828350 708290 536770 915590 1244400 800860 866650 1077700 370930 1221200 1302100 489830 257730 730850 672050 951900 1017400 743250 852850 729850 579650 927540 1216400 835460 880300 1094900 435140 1167600 1226600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 783160000 30639 3374 28786 57507;57508;57509 46465;46466;46467 46466 3 9606 Homo sapiens -0.003950327164716327 YAECGLR Unmodified 867.39089 0.39088704 3155 K7ERP4;K7EJ20;P36969-2;P36969;A0A0A0MTT1;K7EKX7;R4GNE4;K7ENB4;Q6PI42;A0A087X247 GPX4 Glutathione peroxidase;Phospholipid hydroperoxide glutathione peroxidase, mitochondrial yes no 0 0 0 4 0.816 1 1 1 36.691 36.755 2 0.021607 8239 20230619_1883_Aki_TMTPro18x_K_F4 103.02 84.982 174170 147770 190320 177510 264880 264590 257480 241300 275130 257100 278890 252820 256120 211960 275170 222910 283730 209870 161210 135520 193040 178010 268740 260480 260500 248460 279410 258890 284860 255460 262970 220580 279620 223320 270870 199750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144720000 30640 3155 28787 57510;57511;57512 46468 46468 1 9606 Homo sapiens -0.048112765939322344 YAEEDRR Unmodified 937.42536 0.42535829 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z4T3;A1XP52;H0Y8S0 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 1 1 0 1 23.324 23.324 3 2.0982E-05 3866 20230619_1880_Aki_TMTPro18x_K_F1 133.81 25.725 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30641 1488 28788 57513 46469 46469 1 9606 Homo sapiens -0.04585737181469085 YAEEELEQVR Unmodified 1264.5935 0.59354583 1826 E9PRZ7;E9PNJ4;A0A8V8TMG1;A0A8V8TP73;V5J3L2;A0A8V8TNW5;A0A8V8TMG5;H0YDB2;A0A8V8TNW0;G0XQ39;Q13586-2;Q13586 STIM1 Stromal interaction molecule 1 yes no 0 0 0 1 0 1 47.289 47.289 2 0.00020362 13258 20230619_1880_Aki_TMTPro18x_K_F1 137.69 111.8 43635 33376 39669 46793 47162 45597 58147 57814 62507 59874 55588 64487 68167 52157 65672 72247 65007 67213 40301 30671 40788 46135 48639 46482 58103 58271 63176 60521 57989 64830 69017 55285 66824 71977 62220 63884 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34428000 30642 1826 28789 57514 46470 46470 1 9606 Homo sapiens -0.02816719778343213 YAEIVHLTLPDGTK Unmodified 1555.8246 0.8246084 1233 A0A140VK65;P21281;Q59HF3;H0YC04 ATP6V1B2 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 8 0 1 58.125 58.171 3 3.428E-07 17035 20230619_1888_Aki_TMTPro18x_K_F8 138.87 119.29 78876 62144 75642 84942 63296 79612 83445 81175 72215 92738 88034 102770 99876 80670 82397 98702 105480 130020 72893 57085 76995 83820 67302 80907 82659 83163 74938 93340 90200 103060 100710 84969 85465 100580 100870 123080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35506000 30643 1233 28790 57515 46471 46471 1 9606 Homo sapiens 0.06892908203485604 YAELLEEHR Unmodified 1158.5669 0.56693715 3569 P40222 TXLNA Alpha-taxilin yes yes 0 0 0 2.33 0.471 2 1 45.491 45.569 3 0.000161 12402 20230619_1881_Aki_TMTPro18x_K_F2 111.31 89.845 346000 248980 304940 276670 325800 403360 314630 291690 594470 117230 111870 109160 117780 95799 212380 145380 155550 144390 319380 228320 313340 278860 337520 395600 326090 301110 568940 128740 137850 110980 124720 101920 210780 145440 149300 137190 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81832000 30644 3569 28791 57516;57517;57518 46472;46473 46473 2 9606 Homo sapiens -0.006003638790161858 YAELSEEDLK Unmodified 1195.5608 0.56084872 3974 Q4G0N4-2;Q4G0N4 NADK2 NAD kinase 2, mitochondrial yes no 0 0 0 2 0 1 52.389 52.427 3 0.0067806 15499 20230619_1881_Aki_TMTPro18x_K_F2 80.24 46.831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30645 3974 28792 57519 46474 46474 1 9606 Homo sapiens -0.02910926901199673 YAESLGQYAAASQSCNFALR Unmodified 2206.0113 0.011316328 2127 A8K8X0;Q14CX7-2;Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes no 0 0 0 2 0 1 59.118 59.131 3 8.0972E-45 18265 20230619_1881_Aki_TMTPro18x_K_F2 245.74 234.93 19723 14062 17637 20152 17049 21355 16867 19286 22084 23606 21076 26303 29847 24426 22857 40114 30984 45858 18207 12930 18096 19857 17786 21444 17191 19958 22190 23709 22086 26533 29858 26103 23916 40313 29670 43441 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31326000 30646 2127 28793 57520 46475 46475 1 9606 Homo sapiens -0.04344887761044447 YAETFLEPWFK Unmodified 1429.6918 0.69180331 227 O60362;A0A024R388;Q6MZT3;Q9NXG2;B4DFY9 44M2.1;THUMPD1;DKFZp686C1054 THUMP domain-containing protein 1 yes no 0 0 0 8 0 1 64.683 64.703 3 0.00060519 19815 20230619_1888_Aki_TMTPro18x_K_F8 94.692 78.468 33597 30495 35509 38579 34540 40696 41631 43416 46801 41967 41006 45081 44978 39653 37090 50684 43824 53430 31102 27975 35923 38326 36159 41044 41729 44123 47149 42587 42542 45445 45423 41663 38306 50865 41932 50684 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48205000 30647 227 28794 57521 46476 46476 1 9606 Homo sapiens -0.005854914625160745 YAFGQETNVPLNNFSADQVTR Unmodified 2370.124 0.1240379 3262 O43678 NDUFA2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 0 0 0 7.5 0.5 1 1 59.391 59.436 3 7.5104E-23 17559 20230619_1887_Aki_TMTPro18x_K_F7 183.45 152.8 70607 58897 67399 79929 78939 85707 85178 86671 101970 92580 85464 74450 94210 71515 72996 96106 86511 78572 65271 54086 68988 79041 81262 86239 86022 88616 102290 92718 88746 76360 94824 75199 75472 95136 82588 74843 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281220000 30648 3262 28795 57522;57523 46477;46478 46477 2 9606 Homo sapiens -0.0062191576334953425 YAFSGVAFTGAK Unmodified 1217.6081 0.60807369 3498 Q6FGU2;P23919;Q53F55;P23919-2;H7BZ20 DTYMK Thymidylate kinase yes no 0 0 0 3 0 1 57.987 58.017 2 7.8257E-08 17606 20230619_1882_Aki_TMTPro18x_K_F3 173.71 129.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30649 3498 28796 57524 46479 46479 1 9606 Homo sapiens 0.007973971604542385 YAGDIIK Unmodified 778.4225 0.42250475 1002 A8K6X3;A0A0C4DG89;Q7L014;D3DQA6 DDX46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 6.5 0.5 1 1 48.323 48.406 2 0.019836 13200 20230619_1886_Aki_TMTPro18x_K_F6 105.39 35.123 307480 250080 287860 310580 360110 395220 371170 370110 452090 330740 352540 323090 361570 293890 341730 395670 413380 327160 284160 229460 295300 309770 368750 392620 375960 378710 451660 336400 366600 327680 367840 309460 352060 392010 394230 311780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123000000 30650 1002 28797 57525;57526 46480 46480 1 9606 Homo sapiens 0.02443039431670968 YAGEPVPFIEPPESFEFYAQQLR Unmodified 2713.3064 0.30641894 1723 P42704;A0A804HIN4;A0A804HIG4;A0A804HI14;A0A804HL40;E5KNY5;A0A804HKJ0;A0A804HK30;A0A804HJZ1;A0A804HLG8;A0A804HKR3;A0A804HKI2;A0A804HHY9 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 6.5 0.5 1 1 65.137 65.173 3 4.9812E-26 20428 20230619_1886_Aki_TMTPro18x_K_F6 176.1 157.85 44932 36492 46196 51840 38604 44600 46298 42934 38969 53806 56766 60181 62542 50406 58783 68701 60357 65401 41555 33533 46743 50978 40890 45601 46042 44305 40886 53952 57694 60485 63440 53288 59985 68529 57769 62135 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 444870000 30651 1723 28798 57527;57528 46481;46482 46481 2 9606 Homo sapiens 0.018297988587164582 YAGLSTCFR Unmodified 1073.4964 0.49641475 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 48.397 48.469 2 2.2386E-05 13435 20230619_1882_Aki_TMTPro18x_K_F3 198.25 148.6 579920 466920 447310 491440 489730 609230 561630 558840 672280 188260 179830 147650 174960 147630 444170 205940 199710 154630 535170 427780 466440 496000 508290 605850 565110 564510 657350 209820 207880 152270 191550 155330 432090 203930 193130 147580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 608590000 30652 3609 28799 57529;57530 46483 46483 1 9606 Homo sapiens -0.037393604683074955 YAGPLHHQTQR Unmodified 1306.6531 0.65306682 3893 Q96J71;Q14576;Q14576-2 ELAVL3 ELAV-like protein;ELAV-like protein 3 yes no 0 0 0 1 0 1 26.852 26.852 4 0.00032552 4821 20230619_1880_Aki_TMTPro18x_K_F1 93.345 76.813 7142 8668.7 10332 12645 11616 10197 8929.3 8868.1 9623.1 5865.7 9160 9274.3 5603.1 6260 8248.8 5443.7 8637 8061 6648.4 7958.2 10258 12402 11862 10471 9187.1 9084.4 9729.2 6197.5 9269.3 9157.3 5968.1 6507.6 8347.1 5640 8256.1 7630.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3477700 30653 3893 28800 57531 46484 46484 1 9606 Homo sapiens 0.012006407463559299 YAGSALQYEDVSTAVQNLQK Unmodified 2184.0699 0.069877064 851 A0A087WY55;Q9NP79;Q5TGM0;Q9NP79-2 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog yes no 0 0 0 8 0 1 61.357 61.385 3 1.5311E-36 18342 20230619_1888_Aki_TMTPro18x_K_F8 219.97 204.03 251970 201060 230660 269770 230770 260770 261300 260200 292290 326530 332390 338810 338450 297110 318330 380870 336720 378450 232790 184650 236330 266600 240630 264330 262720 267690 297790 326750 339470 342020 344330 312240 325440 381070 322280 359320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253840000 30654 851 28801 57532 46485;46486 46485 2 9606 Homo sapiens 0.025204920850228518 YAHVVLR Unmodified 856.49192 0.49192172 3710 P62269 RPS18 40S ribosomal protein S18 yes yes 0 0 0 2.5 0.5 1 1 36.242 36.298 2 0.0078243 8176 20230619_1881_Aki_TMTPro18x_K_F2 122.17 72.807 101970 45857 85842 102900 97411 106310 115600 104750 129910 116050 123370 115270 130850 106280 101810 129550 129390 123020 93899 42548 88833 99149 100790 107100 115890 107470 131240 116690 127130 116810 131920 111180 105710 129370 123490 116940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113990000 30655 3710 28802 57533;57534 46487 46487 1 9606 Homo sapiens 0.057935431711030105 YAHWVVSQPPDTYLK Unmodified 1802.8992 0.89917033 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;Q92973-3;A0A7P0T944;A0A7P0T9C0 TNPO1 Transportin-1 yes no 0 0 0 2 0 1 55.423 55.444 3 6.9446E-06 16752 20230619_1881_Aki_TMTPro18x_K_F2 115.8 101.79 42355 26212 35643 44883 32881 57369 39402 43547 53872 55182 44773 61356 71178 63524 46171 75918 80767 95983 39053 24171 36805 43899 34760 56661 39804 45743 53761 55362 47608 62051 70687 66135 49464 77108 77048 90897 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215250000 30656 629 28803 57535 46488 46488 1 9606 Homo sapiens 0.029836710149083956 YAIAVNDLGTEYVHR Unmodified 1719.858 0.8580338 3339 O94925-3;B3KM58;A8K132;O94925;Q53TX0;H7BZD1 GLS Glutaminase kidney isoform, mitochondrial yes no 0 0 0 6 0.816 1 1 1 52.636 52.709 3 1.1969999999999999E-53 15083 20230619_1886_Aki_TMTPro18x_K_F6 315.32 287.66 189910 224750 222960 200820 207800 194940 216950 224240 163980 203030 183750 170400 198850 150600 239240 189960 176410 178690 176340 205390 223320 205000 216750 198530 216770 226470 171120 205150 188350 173850 204170 158200 238830 189800 169410 169830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1003599999.9999999 30657 3339 28804 57536;57537;57538 46489 46489 1 9606 Homo sapiens 0.026899099754018607 YAICSALAASALPALVMSK Oxidation (M) 1952.0111 0.011105318 3558 Q59GY2;P36578;B4DMJ6;H3BM89;B4DMJ2;B4DFI6;H3BTP7 RPL4 60S ribosomal protein L4 yes no 0 1 0 6 0 1 64.091 64.137 3 1.362E-07 19974 20230619_1886_Aki_TMTPro18x_K_F6 112.16 95.091 127740 119940 121830 178880 213210 140590 187900 159740 134410 113180 181630 148940 138760 131890 187950 133180 126720 122720 118180 110220 125880 175170 212640 145710 189190 160830 141690 117950 182170 149210 145300 136560 186580 133440 121810 116680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 226370000 30658 3558 28805 57539 46490 46490 2223 1 9606 Homo sapiens 0.07318020985326257 YAICSALAASALPALVMSK Unmodified 1936.0162 0.016190696 3558 Q59GY2;P36578;B4DMJ6;H3BM89;B4DMJ2;B4DFI6;H3BTP7 RPL4 60S ribosomal protein L4 yes no 0 0 0 6.5 0.5 2 2 65.247 65.282 3;4 1.4322E-24 20450 20230619_1886_Aki_TMTPro18x_K_F6 197.14 180.06 110410 98302 112870 141160 140280 124550 151610 144940 123510 120220 121060 102840 103320 98485 125750 102330 110620 105490 102170 90311 115020 138760 143480 127710 151320 146050 127330 122250 123510 105100 107130 101920 126510 103040 105950 100180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 655970000 30659 3558 28805 57540;57541;57542;57543 46491;46492 46491 2 9606 Homo sapiens 0.08562324847957825 YAILNEPFK Unmodified 1093.5808 0.5807963 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8Y7I0;A0A2R8Y7M9 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 0 4.5 3.5 1 1 59.038 59.059 2 5.7771E-05 17403 20230619_1888_Aki_TMTPro18x_K_F8 162.49 120.39 192080 154150 173750 192540 151560 219570 202420 196860 257160 170550 150240 138480 161580 136310 161840 192000 188520 118270 177450 141460 177880 191620 161090 219300 202750 201990 254360 173010 159620 142110 164650 143540 166170 187860 179630 113370 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 188330000 30660 1005 28806 57544;57545 46493;46494 46494 2 9606 Homo sapiens 0.03774913620077314 YAIQLITAASLVCR Unmodified 1577.8599 0.85994805 4699 Q9Y230;B3KNL2;Q9Y230-2 RUVBL2 RuvB-like 2 yes no 0 0 0 7.5 0.5 1 1 63.988 64.014 3 0.0012454 19551 20230619_1888_Aki_TMTPro18x_K_F8 76.759 56.333 8568.7 8493.1 11326 10765 9198.6 14388 12028 12668 13787 10460 13790 14089 14862 11539 12552 14864 13754 14785 7954.8 7789.2 11248 10732 9825.8 14221 12023 12999 13928 10806 14195 14062 15017 12164 12884 14872 13155 14040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60960000 30661 4699 28807 57546;57547 46495 46495 1 9606 Homo sapiens 0.09413247459656304 YALPLVGHR Unmodified 1024.5818 0.58179936 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 4 0.816 1 1 1 45.928 45.993 3 4.0831E-05 12298 20230619_1882_Aki_TMTPro18x_K_F3 148.38 106.09 182600 138180 167360 171800 178040 215720 202870 208230 228790 232590 222590 238810 226610 192450 234220 262110 245140 270030 168650 126830 171510 171330 184960 214570 203930 213820 231450 233910 229020 240560 231530 203750 238810 262620 234620 256300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 794280000 30662 909 28808 57548;57549;57550 46496;46497 46496 2 9606 Homo sapiens 0.07049172779647961 YALTGDEVK Unmodified 994.49713 0.49712625 2202 Q96IR1;B2R491;P62701;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6;B7Z1M6 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 0 0 0 4 0.816 1 1 1 47.687 47.753 2 2.416E-08 12971 20230619_1883_Aki_TMTPro18x_K_F4 209.11 167.88 746460 513060 619290 714540 672280 864940 728080 745940 1099900 1007300 1037400 1156400 1181300 1022400 676730 1355300 1374200 1314500 688560 471670 641190 706640 697640 860010 742260 777190 1096900 1009000 1073500 1162800 1178100 1076400 739230 1352200 1307700 1249100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1787099999.9999998 30663 2202 28809 57551;57552;57553 46498;46499;46500;46501 46499 4 9606 Homo sapiens -0.0003424254762194323 YALTGDEVKK Unmodified 1122.5921 0.59208927 2202 Q96IR1;B2R491;P62701;Q53HV1;Q8TD47;C9JEH7;A4FU11;Q496E4;P22090;Q53HI6;B7Z1M6 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 0 0 1 7.5 0.5 1 1 45.154 45.211 3 0.00062816 11361 20230619_1887_Aki_TMTPro18x_K_F7 87.184 66.314 824930 672180 736550 715670 908560 860220 973170 898230 901000 946020 942870 689590 1077600 767540 849360 1001600 904610 706360 762100 615870 757970 721610 930520 860400 975050 916080 924250 945690 969530 715590 1083600 802040 871520 985920 863610 674760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3005699999.9999995 30664 2202 28810 57554;57555 46502;46503 46502 2 9606 Homo sapiens 0.035696909235639396 YALTTTLSAR Unmodified 1095.5924 0.59242362 4544 Q9HB07;F8VR84;Q8WYI2 C12orf10;MST024 UPF0160 protein MYG1, mitochondrial yes no 0 0 0 3 0 1 48.365 48.444 2 5.7397E-11 13440 20230619_1882_Aki_TMTPro18x_K_F3 171.46 156.45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30665 4544 28811 57556 46504 46504 1 9606 Homo sapiens 0.04845110643418593 YALYDASFETK Unmodified 1306.6081 0.60813326 3684 V9HWA6;P60981;P60981-2;F6RFD5;B7Z9M9 HEL32;DSTN Destrin yes no 0 0 0 5.5 0.5 1 1 57.215 57.28 3 1.7921E-05 16768 20230619_1885_Aki_TMTPro18x_K_F5 141.1 130.49 121220 104120 114770 124430 114740 132410 126500 132860 134750 138740 132860 135830 157720 127140 133790 158740 145510 147080 112070 95477 117180 124120 119550 133300 127170 135840 136820 139790 137510 137760 159000 133130 137260 158290 139120 139820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1476399999.9999998 30666 3684 28812 57557;57558 46505 46505 1 9606 Homo sapiens -0.03290647630205967 YALYDATYETK Unmodified 1336.6187 0.61869795 3495;4013 V9HWI5;P23528;G3V1A4;E9PK25;E9PP50;B4E112;E9PQB7;E9PLJ3;Q549N0;Q9Y281;Q9Y281-3 HEL-S-15;CFL1;CFL2 Cofilin-1;Cofilin-2 no no 0 0 0 5.09 1.93 1 1 2 2 2 2 1 53.807 53.858 2;3 2.0161E-23 15717 20230619_1883_Aki_TMTPro18x_K_F4 262.63 187.25 1672900 1357400 1471200 1662500 1624200 1991400 1698400 1791100 1905400 2407800 2201500 2322100 2771100 2272100 2177300 2566600 2461200 2565200 1545300 1245300 1514900 1657900 1679200 1983700 1715200 1859500 1944600 2397300 2270200 2358800 2781300 2361600 2242300 2573500 2352800 2436100 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 51344000000 30667 3495;4013 28813 57559;57560;57561;57562;57563;57564;57565;57566;57567;57568;57569 46506;46507;46508;46509;46510;46511;46512 46507 7 9606 Homo sapiens -0.036146649757938576 YAMAWGVVER Oxidation (M) 1196.5648 0.56482866 3767 P83111 LACTB Serine beta-lactamase-like protein LACTB, mitochondrial yes yes 0 1 0 5.5 0.5 1 1 50.838 50.915 3 0.010421 14274 20230619_1886_Aki_TMTPro18x_K_F6 66.299 31.767 167770 125000 151590 151050 116690 158810 166070 141290 90950 179610 176230 206940 231920 191230 186100 243500 200230 218860 154920 114700 154860 150530 125360 159550 162360 146690 100700 180120 179480 208300 232670 200510 191150 242310 191570 208070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 389840000 30668 3767 28814 57570;57571 46513;46514 46514 2452 2 9606 Homo sapiens -0.02559115888470842 YAMENHSLR Oxidation (M) 1135.508 0.50804206 2757 D6RCT7;C9JKA9;Q9NS87-4;Q9NS87-2;Q9NS87 KIF15 Kinesin-like protein;Kinesin-like protein KIF15 yes no 0 1 0 3.5 0.5 1 1 29.458 29.544 3 0.00072419 5372 20230619_1883_Aki_TMTPro18x_K_F4 98.055 82.299 12636 7702.6 10987 12764 12206 14380 11805 11795 16326 12048 16855 15523 11593 12801 11703 12549 17163 12553 11653 7100.4 11327 12484 12591 14349 12067 12240 16370 12280 17025 15512 12030 13263 12203 12617 16337 11940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23988000 30669 2757 28815 57572;57573 46515 46515 1646 1 9606 Homo sapiens -0.05429163445000995 YANEVNSDAGAFK Unmodified 1384.6259 0.62590859 4661 Q9UHB9;B4DVI7;Q9UHB9-4;Q9UHB9-2;Q96K98;Q96K97;Q9UHB9-3 SRP68 Signal recognition particle subunit SRP68 yes no 0 0 0 4 0 1 48.742 48.779 2 0.00042213 13430 20230619_1883_Aki_TMTPro18x_K_F4 118.9 106.52 32445 28073 35374 36461 36065 42252 43508 41139 43382 44685 55583 54794 50503 47536 47188 58667 55410 60724 30034 25765 35717 36207 37604 42249 43439 42207 44671 45272 56227 54952 51580 49836 48564 58857 52973 57635 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30400000 30670 4661 28816 57574 46516 46516 1 9606 Homo sapiens -0.05101932375328033 YANVIAYDHSR Unmodified 1307.6258 0.62584901 3018 Q13332;Q13332-6;Q13332-7;Q9UM81;G8JL96;Q13332-5;Q59FX6;Q13332-3;Q13332-4;Q13332-2;H0Y7Z9;Q3KPI9;H0Y6Z7;H0Y4H1;B4DK48;B3KWM1;Q2HXI4;A0A0U1RQU1;F5GWR7;Q59FI2;Q5W9G3;A8E4L7;Q7Z3X4;H0Y380;P10586;P23468-3;P23468-7;P23468-5;P23468-6;P23468-2;Q59H90;P23468-4;P23468;P10586-2;B3KXJ7;B3KXA8 PTPRS;PTPsigma;PTPRF;PTPRD;LAR;DKFZp686B1310 Receptor-type tyrosine-protein phosphatase S;Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase F;Receptor-type tyrosine-protein phosphatase delta yes no 0 0 0 7 0 1 41.45 41.521 3 2.2267E-05 9870 20230619_1887_Aki_TMTPro18x_K_F7 139.76 28.264 39332 30475 36336 37952 37635 42606 41678 36641 44771 44255 41902 40682 42998 39623 44931 40079 47553 39903 36334 27968 37192 37771 39111 42594 41876 38063 45336 44223 43181 41412 43965 40923 45768 40284 45420 37930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38546000 30671 3018 28817 57575 46517 46517 1 9606 Homo sapiens -0.015658875846838782 YAPDDIPNINSTCFK Unmodified 1753.7981 0.79813565 1289 P55196-5;A8MQ02;P55196;P55196-1;H0Y8U8;A0A804HJ20;A0A1P7ZIN0;G1UI22;J3KN01;P55196-2;P55196-6;P55196-3;Q5TIG5;H0YA98 MLLT4 Afadin yes no 0 0 0 7 0 1 59.02 59.069 3 0.016646 17440 20230619_1887_Aki_TMTPro18x_K_F7 58.885 43.631 40947 33660 36377 41617 31984 34468 37968 37109 46713 43097 38641 36080 44947 33047 38199 51197 43516 50308 37829 30882 37295 41284 33747 35467 38209 37903 46781 43028 40281 36873 45327 35182 39330 51058 41632 47768 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32762000 30672 1289 28818 57576 46518 46518 1 9606 Homo sapiens -0.04861148750137545 YAPENLDEQIKK Unmodified 1446.7355 0.73545904 4531 Q9H845;Q9H9W4;H0Y8Z9;Q9BUX5 ACAD9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 1 6 0 1 48.399 48.478 3 7.5837E-07 13238 20230619_1886_Aki_TMTPro18x_K_F6 145.71 122.99 87116 85014 94444 99633 112330 109570 122730 107240 107150 119710 137390 119430 123010 92266 144100 97520 106870 86226 80707 77911 95632 99567 115330 110050 122650 110090 111280 120250 138860 120340 126840 96385 143830 97465 102470 82093 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83268000 30673 4531 28819 57577 46519 46519 1 9606 Homo sapiens 0.029960732439803905 YAPGDAVEK Unmodified 948.45526 0.45526144 4491;3802 Q05CW7;Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 no no 0 0 0 3.5 0.5 1 1 43.085 43.14 2 0.00027769 10986 20230619_1882_Aki_TMTPro18x_K_F3 141.52 68.26 103990 71456 101350 103790 130180 140670 123810 123460 148530 133460 151270 137560 136070 127270 120350 111980 144630 136610 96036 65723 103620 102600 132780 139020 125960 127550 149970 134520 154280 139090 138700 130810 123950 114210 138090 129520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93778000 30674 3802;4491 28820 57578;57579 46520 46520 1 9606 Homo sapiens -0.021027982361374598 YAPLGWSK Unmodified 920.4756 0.47560295 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3.5 0.5 1 1 54.811 54.84 2 0.00944 16268 20230619_1882_Aki_TMTPro18x_K_F3 113.5 79.246 199810 185090 206340 195010 196760 250020 223720 205970 266150 163430 153300 140830 160090 130000 193830 172390 170180 153300 184960 169490 208900 196940 206140 247620 225240 212360 263940 167010 162920 143750 164780 136730 195070 171570 162940 145870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84265000 30675 3881 28821 57580;57581 46521 46521 1 9606 Homo sapiens 0.012184172143292926 YAPLHLVPLIER Unmodified 1419.8238 0.82382054 4154 Q7L576;X5D2F4;A0A087WVZ5;B3KWV6;E7EVJ5;Q96F07;Q96F07-2;H7C229;B7Z8N7;A0A8V8TNU3;B7Z3H2;B7Z4I3;B7Z217;E7EW33;Q9NSN1;Q7L576-2;B3KWT5;Q7L576-3;H0YL50 CYFIP1;CYFIP2;DKFZp761H087 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 3 0 1 57.288 57.32 3 1.7957E-05 17341 20230619_1882_Aki_TMTPro18x_K_F3 126.48 83.61 45294 40626 50922 51636 43140 46670 48497 48906 57362 54884 53036 50760 59525 51085 53776 62855 54946 61952 41950 37273 51142 51186 45555 47628 48886 49979 57776 55032 54889 51754 60276 53312 54902 62897 52609 58826 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204370000 30676 4154 28822 57582 46522 46522 1 9606 Homo sapiens 0.1307015834511276 YAPSEAGLHEMDIR Oxidation (M) 1603.7301 0.73005609 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5F3 FLNA;FLJ00119 Filamin-A yes no 0 1 0 3 0 1 40.338 40.395 3 7.4251E-07 9784 20230619_1882_Aki_TMTPro18x_K_F3 125.93 105.07 36525 34170 39721 49058 48282 50261 52014 47132 43350 50909 57731 50878 59877 44138 46661 49037 57956 50159 33829 31387 40273 48304 49505 50657 51960 48491 45258 51226 58595 51441 60365 46047 48312 49261 55288 47658 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98909000 30677 3484 28823 57583 46523 46523 2143 1 9606 Homo sapiens -0.04765973610142282 YAPSEAGLHEMDIR Unmodified 1587.7351 0.73514147 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4;Q6NXF2;Q96C61;B4E2F9;B4DTD5;H0Y5F3 FLNA;FLJ00119 Filamin-A yes no 0 0 0 3.5 0.5 1 1 46.12 46.181 3 5.5373E-07 12256 20230619_1883_Aki_TMTPro18x_K_F4 125.73 105.5 100570 73246 87139 87517 96071 115550 98943 107400 131270 120560 112540 131550 126320 110340 113440 129660 129470 139090 92832 67211 89782 87594 99327 114500 100600 110580 131190 121500 117070 132250 127920 115540 116550 130470 123790 131970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 218290000 30678 3484 28823 57584;57585 46524 46524 1 9606 Homo sapiens -0.03521669747510714 YAPSGFYIASGDVSGK Unmodified 1617.7675 0.76748745 4000 Q59ER5;Q53H17;Q53GN4;A0A8V8TNU2;A0A8V8TNT7;O75083;A0A8V8TP22;A0A8V8TQ74;A0A8V8TQK0;V9HWG7;A0A8V8TP31;D6RD66;B4DS71 WDR1;HEL-S-52 WD repeat-containing protein 1 yes no 0 0 0 1 0 1 57.72 57.72 3 2.1588E-08 17558 20230619_1880_Aki_TMTPro18x_K_F1 136.14 115.47 76778 66478 64153 89420 75223 104430 89323 80678 109980 106110 90890 92107 103260 81244 93607 119060 97920 107900 70924 61035 66577 88534 77865 103850 89820 84767 110150 105490 94703 93784 104510 86195 95741 118330 93716 102560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 390570000 30679 4000 28824 57586 46525 46525 1 9606 Homo sapiens -0.016685590728911848 YAPTEAQLNAVDALIDSMSLAK Unmodified 2320.1621 0.16206289 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 5.33 3.09 1 1 1 66.794 66.808 3 2.1526E-38 20645 20230619_1888_Aki_TMTPro18x_K_F8 240.21 225.2 38942 28366 38111 42652 32324 43249 41867 41918 41706 45669 46922 53906 60143 49315 49119 64813 59042 77796 35977 26094 38720 41887 34340 43618 41672 43026 42733 46192 48523 54172 60395 51869 50716 65547 56525 73684 3 3 3 3 4 3 4 3 4 3 4 3 3 4 3 4 4 4 69310000 30680 3444 28825 57587;57588;57589 46526;46527;46528;46529 46528 4 9606 Homo sapiens 0.0547883410704344 YAPTEAQLNAVDALIDSMSLAK Oxidation (M) 2336.157 0.15697751 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 1 0 7.5 0.5 1 1 64.301 64.33 3 6.4038E-09 19783 20230619_1887_Aki_TMTPro18x_K_F7 116.65 102.49 20063 22781 19117 39492 19642 25120 28266 29287 29876 42277 36199 30451 32845 25139 33893 50316 34921 46211 18590 20964 19640 38263 20616 26560 28049 29996 30649 41637 36662 31311 33660 27460 34603 49864 33480 43894 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 201540000 30681 3444 28825 57590;57591 46530;46531 46530 2081 2 9606 Homo sapiens 0.04234530244457346 YAQAGFEGFK Unmodified 1116.524 0.52400971 3312 O75643;A4FU77;A0A494C1A5;Q9H8B9;O75643-2 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 7.5 0.5 1 1 53.443 53.518 3 0.00016005 15151 20230619_1887_Aki_TMTPro18x_K_F7 113.44 93.141 165550 152930 177790 188370 179280 203710 187610 187590 223710 217340 198010 205210 232460 196190 218060 245280 222420 243730 153300 140250 179670 187520 186380 204460 189830 193560 224960 217740 205950 208590 235480 205300 222390 245530 212920 231430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 464870000 30682 3312 28826 57592;57593 46532;46533 46532 2 9606 Homo sapiens -0.029591339364287705 YAQDFGLVEEACFPYTGTDSPCK Unmodified 2654.1305 0.13050477 1649 P53634;A0A7I2V2Q8;A0A7I2V466;B4DJQ8;A0A7I2V6E3;A0A7I2YQT5 CTSC Dipeptidyl peptidase 1;Dipeptidyl peptidase 1 exclusion domain chain;Dipeptidyl peptidase 1 heavy chain;Dipeptidyl peptidase 1 light chain yes no 0 0 0 5 0 1 62.929 62.976 3 1.7885E-09 19307 20230619_1885_Aki_TMTPro18x_K_F5 119.83 115.47 32585 25734 26844 32191 31675 34822 30677 32564 33239 36174 33171 36597 35850 31625 31847 37154 40802 38591 30080 23617 27849 32005 32507 34962 31077 33517 33749 36370 34178 36949 36332 33077 32977 37314 38937 36647 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116210000 30683 1649 28827 57594 46534 46534 1 9606 Homo sapiens -0.1303952670923536 YAQGADSVEPMFR Unmodified 1469.6609 0.66091389 1948;1608 Q5TA58;B3KME0;B2RAD8;A0A6I8PTZ8;Q9UL18;A0A8V8TNY0;A4FVC0;Q9UKV8-2;Q9UKV8 AGO1;EIF2C2;AGO2 Protein argonaute;Protein argonaute-1;Protein argonaute-2 no no 0 0 0 4 0 1 50.919 50.951 2 4.1469E-26 14415 20230619_1883_Aki_TMTPro18x_K_F4 217.14 193.11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30684 1608;1948 28828 57595 46535 46535 1 9606 Homo sapiens -0.05513012839037401 YAQTGEIDGELLR Unmodified 1463.7256 0.72562264 2924 E9PJP2;Q5TF21;A0A994J4H7;A5PLQ8;A1L177 SOGA3;C6orf174 Protein SOGA3 yes no 0 0 0 2.5 0.5 1 1 52.18 52.232 2 2.015E-10 15150 20230619_1882_Aki_TMTPro18x_K_F3 202.18 163.39 42000 37085 43567 49967 43061 46095 38516 43391 56919 55811 58575 63510 63934 53001 58802 67586 64293 75284 38867 34046 44145 49336 44668 46847 39701 44855 57027 55979 60282 63763 64832 55805 60240 68083 61538 71384 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 94619000 30685 2924 28829 57596;57597 46536 46536 1 9606 Homo sapiens 0.012308852386240687 YASETLQAQSEEAR Unmodified 1581.7271 0.7270792 4684 Q9ULR0;Q9ULR0-2;Q9ULR0-1 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes no 0 0 0 2.5 0.5 1 1 41.026 41.093 3 2.2827E-16 10297 20230619_1881_Aki_TMTPro18x_K_F2 200.05 175.58 42637 30091 35728 36963 39958 47594 45125 42675 50391 41620 44281 50741 52109 40826 39841 54527 53081 54111 39339 27623 36948 36904 41356 47196 45349 43912 50776 42413 46097 50764 52345 43172 41541 54504 50667 51396 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123350000 30686 4684 28830 57598;57599 46537 46537 1 9606 Homo sapiens -0.040515254632737197 YASETLQAQSEEARR Unmodified 1737.8282 0.82819023 4684 Q9ULR0;Q9ULR0-2;Q9ULR0-1 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes no 0 0 1 3.5 0.5 1 1 37.248 37.296 3 2.0357E-10 8464 20230619_1883_Aki_TMTPro18x_K_F4 148.21 134.25 49897 36459 46329 54082 63030 71966 58706 62973 81288 63544 72862 72520 74432 66022 66439 73427 84764 75953 46080 33534 47662 53365 64100 71176 60131 64947 81143 64512 75207 73012 75579 68695 68745 73796 80863 72146 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95452000 30687 4684 28831 57600;57601 46538 46538 1 9606 Homo sapiens -0.011210737605779286 YASFQVENDQER Unmodified 1484.6532 0.65318598 49 G5EA31;A0A024QZM6;P53992;B4DSN3 SEC24C Protein transport protein Sec24C yes no 0 0 0 2 0 1 45.15 45.232 2 1.7015E-23 12242 20230619_1881_Aki_TMTPro18x_K_F2 244.27 229.59 56951 41754 41965 51893 50111 59958 59609 59914 53576 68403 72370 76829 70371 57246 62732 74443 74597 79650 52512 38327 44072 51670 51709 60002 59372 61432 55726 68877 73312 76933 71504 60621 64647 74786 71294 75578 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126340000 30688 49 28832 57602 46539 46539 1 9606 Homo sapiens -0.06975448834941744 YASICQQNGIVPIVEPEILPDGDHDLKR Unmodified 3175.5972 0.59719801 3378;26 P04075;V9HWN7;P04075-2;H3BQN4;H3BPS8;A0A0M4FNU3;A4UCS9;A4UCT0;A0A024QZ64;P09972;B7Z1Y2;B7Z3K9;B7Z1N6;B7Z3K7;B7Z1Z9 ALDOA;HEL-S-87p;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C no no 0 0 1 6.33 0.471 2 1 60.607 60.658 4 8.803699999999999E-21 18317 20230619_1886_Aki_TMTPro18x_K_F6 161.49 153.78 102860 91208 110150 99831 94889 58163 122850 110920 52881 133780 129280 91959 108730 72450 163380 82444 74400 75457 95220 83562 110950 99707 99925 63369 120190 110310 61174 132430 128060 94606 113920 76035 159820 82574 72053 71740 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 619770000 30689 3378;26 28833 57603;57604;57605 46540;46541 46540 2 9606 Homo sapiens 0.09642329721600618 YASINTHLGIEQSR Unmodified 1587.8005 0.80051892 2398;544 Q5U045;Q53EZ1;B3KRV2;P49674;H0Y645;B0QY35;B0QY34;A0A669KBC0;J3QQI9;B0QY36;H7C3J2;B4E0G1;A0A024R8X3;H7BYT1;P48730-2;P48730;B4DIJ9;Q59FJ7 CSNK1E;CSNK1D Casein kinase I isoform epsilon;Casein kinase I isoform delta no no 0 0 0 8 0 1 44.487 44.506 3 6.9035E-12 11317 20230619_1888_Aki_TMTPro18x_K_F8 163.62 142.78 39170 28154 32387 33895 32689 39986 37809 41388 42469 41959 45352 42521 42174 34106 40077 36291 42339 41763 36140 25837 33483 33847 34120 39993 37984 42180 43110 42381 46237 42850 43028 35594 40893 36757 40484 39610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29590000 30690 2398;544 28834 57606 46542 46542 1 9606 Homo sapiens 0.030130677698480213 YASPEMCFVFSDR Unmodified 1607.6748 0.6748494 914 P30566;A0A7P0T9A7;A0A7P0Z472;A0A096LNY6;X5D8S6;A0A1B0GTJ7;A0A1B0GWJ0;B4DP46;A0A0A6YY92;Q71UA4;A0A7P0T8E4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;X5D2Z4;X5DP48;P30566-2;A8K4X6;A0A096LP92;A0A096LNY4;A0A096LP72;B4DEP1;X5D7V4;A0A1W2PRX2;X5D7W4 ADSL Adenylosuccinate lyase yes no 0 0 0 6.5 0.5 1 1 60.834 60.884 3 1.4746E-06 18487 20230619_1886_Aki_TMTPro18x_K_F6 140.16 128.02 68978 59291 66479 76133 63254 77724 80778 74493 81311 88693 84358 79754 92998 74322 80159 94230 83406 94693 63783 54410 67769 75508 66475 78379 80441 76728 82978 88595 86757 81208 93991 77936 81999 94354 79849 89894 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92592000 30691 914 28835 57607;57608 46543;46544 46543 2 9606 Homo sapiens -0.10468103402263296 YATLATVSR Unmodified 980.5291 0.52909508 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 2.5 0.5 1 1 44.534 44.611 2 0.0030458 11986 20230619_1881_Aki_TMTPro18x_K_F2 100.76 84.217 377870 316610 371340 428190 448330 504390 486980 448440 547660 363880 413360 430150 416870 363200 466770 374580 533500 438130 349410 290730 379340 424060 460730 502830 490380 459910 548500 374680 430890 431390 427940 377480 476870 380130 509140 415820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 335470000 30692 3881 28836 57609;57610 46545 46545 1 9606 Homo sapiens 0.03805169926192775 YATLPNIMK Oxidation (M) 1065.5529 0.55286699 3563 P38117-2;P38117;M0QY67 ETFB Electron transfer flavoprotein subunit beta yes no 0 1 0 3 0 1 52.542 52.601 3 0.012003 15301 20230619_1882_Aki_TMTPro18x_K_F3 67.897 41.299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30693 3563 28837 57611 46546 46546 2227 1 9606 Homo sapiens 0.022712673683372486 YATPAPSAK Unmodified 904.46543 0.46543219 3880;2441 B3KXQ5;Q14194;B3KV96;E9PD68;B3KT07;Q96I11;X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 no no 0 0 0 5.75 2.77 1 2 1 39.864 39.882 2;3 0.0004634 9230 20230619_1887_Aki_TMTPro18x_K_F7 108.74 67.797 152980 84614 185390 179630 172320 207000 149780 173910 179700 174670 257650 298300 229470 218810 241400 141600 271370 245110 141420 78333 185370 173790 179520 206270 153510 180000 184350 180210 259750 294180 235780 224190 246330 149710 259170 231800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 233680000 30694 2441;3880 28838 57612;57613;57614;57615 46547;46548;46549 46548 3 9606 Homo sapiens 0.009378094890848843 YATSCYSCCPR Unmodified 1423.5319 0.53189033 3832 Q13057;Q13057-2;K7EN91;K7EPC2;K7ES73 COASY Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes no 0 0 0 8 0 1 37.744 37.73 2 4.2264E-12 8571 20230619_1888_Aki_TMTPro18x_K_F8 208.25 208.25 33918 29970 32468 30211 36729 39698 43287 44694 52069 35722 31240 30457 38526 28568 36000 52745 52822 32069 31368 27438 33160 30648 37993 39548 43515 45048 51682 36447 33353 31155 38980 30798 37665 51406 50233 30754 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42268000 30695 3832 28839 57616 46550 46550 1 9606 Homo sapiens -0.1629343406514181 YAVDDVQYVDEIASVLTSQK Unmodified 2242.1005 0.10050849 1198 J3K000;P12955;A0A8V8TLL9;A0A8V8TLP4;A0A140VJR2;A0A494C165;P12955-2;K7ES25;A0A8V8TLR1;A0A494C194;A0A8V8TN48;A0A8V8TNF2;A0A8V8TLN7;A0A8V8TLR6;A0A8V8TNH5 PEPD Xaa-Pro dipeptidase yes no 0 0 0 6 0 1 66.225 66.269 3 1.0634E-07 20873 20230619_1886_Aki_TMTPro18x_K_F6 100.02 89.965 4740.2 4176.1 3003 4753.3 4479.8 3657.8 4479.8 4250.9 8057.8 5513.8 8722.5 8207 9503.2 8226.9 5600.2 8516.3 8175.6 12156 4371.9 3827.4 3226.4 4737.7 4537.9 3801 4623.9 4339.9 8018.7 5594.6 8940.5 8217.3 9490.6 8504.9 5923.1 8746.8 7825 11493 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17724000 30696 1198 28840 57617 46551 46551 1 9606 Homo sapiens 0.029142256794330024 YAVESIR Unmodified 836.43922 0.43921744 626 A0A024RAJ7;A0A024RAK1;Q969S9-4;Q969S9-2;Q969S9-3;Q969S9;D6RAL1;A0A6M4C975;Q969S9-5 GFM2 Ribosome-releasing factor 2, mitochondrial yes no 0 0 0 5 0 1 41.112 41.2 2 0.072702 10019 20230619_1885_Aki_TMTPro18x_K_F5 75.972 40.772 146240 122660 125010 145430 171250 181400 163120 171010 203610 175900 170880 178560 181880 143260 152020 179560 209200 169170 135080 112480 129570 145460 174060 180490 166160 175500 203830 177630 177360 179920 183860 150900 158400 179210 199330 160940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64766000 30697 626 28841 57618 46552 46552 1 9606 Homo sapiens 0.014455403176043546 YAVGEECDFEVGK Unmodified 1501.6395 0.63950975 4666 Q9UIG0-2;Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B yes no 0 0 0 3.5 0.5 1 1 53.766 53.802 3 9.8013E-06 15833 20230619_1882_Aki_TMTPro18x_K_F3 120.57 115.26 85659 65705 74052 76776 74205 87284 89193 79431 103110 87542 90943 77459 94991 77742 79632 99292 89928 100190 79086 60266 76222 76777 77550 87284 89461 81928 103720 87789 93953 79184 96081 81357 81928 99418 86014 95110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 126700000 30698 4666 28842 57619;57620 46553 46553 1 9606 Homo sapiens -0.09124442658435328 YAVLYQPLFDK Unmodified 1355.7125 0.71253876 661;2990 F8W543;H0YH88;P55209;F8VY35;H0YIV4;B7Z2V4;F5H4R6;F8W0J6;F8VUX1;A0A024RBB7;P55209-2;F8W020;F8VXI6;F8VV59;B7Z9C2;A0A024RBE6;P55209-3;F8W118;H0YHC3;B7Z5H0;F8VVB5;F8VRJ2 NAP1L1 Nucleosome assembly protein 1-like 1 no no 0 0 0 3 0.816 1 1 1 62.898 62.914 3 6.2439E-05 19915 20230619_1881_Aki_TMTPro18x_K_F2 127.42 97.614 2042600 1818900 2013100 1955700 1569900 2038700 1799600 1757700 1931900 2627300 2530300 2338900 2802800 2180100 2388200 2918400 2569200 2659300 1889600 1666100 2040500 1965800 1674400 2049100 1807000 1838500 1987900 2599000 2578300 2382900 2830500 2294000 2448800 2904700 2457100 2528200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3562799999.9999995 30699 2990;661 28843 57621;57622;57623 46554;46555;46556 46554 3 9606 Homo sapiens 0.048910989171417896 YAVPSAGLR Unmodified 932.50797 0.50796571 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 1.5 0.5 1 1 43.934 43.976 2 0.013327 11874 20230619_1880_Aki_TMTPro18x_K_F1 95.605 85.967 402490 357990 440370 408160 523580 519370 534090 498080 486230 278280 301200 285810 264340 231250 449820 211700 278850 261790 372660 328100 445230 409740 536720 516420 536260 504490 490050 293530 316530 288030 279720 239370 443380 216670 268330 248180 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 241590000 30700 3758 28844 57624;57625 46557;46558 46557 2 9606 Homo sapiens 0.039012046173297676 YAVTTGDHGIIR Unmodified 1301.6728 0.67279921 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IS84;A0A3B3ISC6;A0A3B3IU89 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 6.5 0.5 1 1 40.412 40.492 3 7.6117E-19 9434 20230619_1887_Aki_TMTPro18x_K_F7 240.78 212.56 168040 163760 189630 200830 265170 250070 239490 235750 217560 181170 165280 150250 177480 143650 202160 183310 192400 195530 155730 150140 192010 200410 268260 248900 242240 240330 220860 185120 172610 153840 181890 150600 204490 184310 184200 185570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 437980000 30701 3647 28845 57626;57627 46559;46560 46560 2 9606 Homo sapiens 0.034029719664886215 YAWQGVALLPFVDER Unmodified 1762.9043 0.90425571 2350 B3KMC9;Q9H0D6;B4DZC3;Q9H0D6-2;B4E0B9 XRN2 5'-3' exoribonuclease 2 yes no 0 0 0 1 0 1 64.991 64.991 3 1.5208E-10 20532 20230619_1880_Aki_TMTPro18x_K_F1 125.36 97.712 4813.1 4626.4 5567.2 5100.4 4848.8 6147.4 7017.8 5191.6 5095.4 5029.1 5287.9 7615.8 8319.5 5941.3 7691.5 5357.1 6395.5 7954.2 4461.2 4237.7 5581.7 5128 5148.9 6114.3 6887.7 5372.6 5309.8 5169.5 5569.1 7546.9 8354.4 6160.5 7747.6 5546 6142.5 7521.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29849000 30702 2350 28846 57628 46561 46561 1 9606 Homo sapiens 0.05331974877481116 YAWVLDK Unmodified 893.4647 0.46470391 1560;3997;1378 Q05639;A0A2U3TZH3;Q59GP5;A0A2R8Y488;A0A2R8Y660;A0A2R8YDN5;Q6NSH7;A0A4D5RAE1;A0A4D5RA53;A0A4D5RA40;A0A4D5RA74;A0A4D5RAA6;A0A4D5RAC3;P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;Q53G89;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q9H2I7;A0A4D5RA52;A0A087WV01;A0A4D5RA61;A0A4D5RBK4;A0A4D5RAF1;A0A4D5RBI9;A0A4D5RBD4;A0A4D5RAB6;A0A4D5RA69;A6PW80;A0A4D5RBL9;Q5JR01;A0A4D5RAA9;Q53GE9 EEF1A2;EEF1A1;EEF1A1P5 Elongation factor 1-alpha 2;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 1 0 1 59.293 59.293 2 0.023523 18207 20230619_1880_Aki_TMTPro18x_K_F1 105.12 58.049 74741 61513 71395 80767 74286 108010 96729 95455 127780 111550 106190 114270 131780 102810 103260 130700 122120 132950 69087 56472 72956 80310 77794 106770 97140 98788 127540 112010 111110 115490 132290 107950 106700 130940 116730 126210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56669000 30703 1378;1560;3997 28847 57629 46562 46562 1 9606 Homo sapiens 0.013710148400377875 YAYTGECR Unmodified 1018.4178 0.41783007 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 0 4 0 1 36.004 36.05 2 0.019685 7973 20230619_1883_Aki_TMTPro18x_K_F4 89.296 78.828 99646 73876 94820 119060 113140 121760 113650 115690 130900 120850 134080 146200 146710 120920 109930 132940 155690 147210 92049 68014 97142 116460 116080 122730 115100 118780 132500 122640 138010 146370 147590 126220 115080 134140 148460 139700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 156620000 30704 2484 28848 57630 46563 46563 1 9606 Homo sapiens -0.09064212773387226 YAYYDTER Unmodified 1079.456 0.45598972 2403 B4DMT5;H0YDT6;B3KSH1;O00303;B4DEW9 EIF3F Eukaryotic translation initiation factor 3 subunit F yes no 0 0 0 3 0.816 1 1 1 40.874 40.933 2 0.00045293 10212 20230619_1881_Aki_TMTPro18x_K_F2 163.67 113.04 499910 395020 478920 534920 550230 578520 600590 582890 630290 657750 708720 697190 708940 575210 584860 806680 805490 697900 461990 362820 489680 529180 566970 581790 603570 597230 643710 661780 723270 702190 717670 609520 610280 800170 767810 664420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 623420000 30705 2403 28849 57631;57632;57633 46564;46565 46564 2 9606 Homo sapiens -0.08056003587103078 YCALLLPLLK Unmodified 1202.7097 0.70970199 1528 Q13144;A0A3B3IUB1 EIF2B5 Translation initiation factor eIF-2B subunit epsilon yes no 0 0 0 6 0 1 64.914 64.958 3 0.0021411 20314 20230619_1886_Aki_TMTPro18x_K_F6 93.551 63.741 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30706 1528 28850 57634 46566 46566 1 9606 Homo sapiens 0.11645552258664793 YCANAFK Unmodified 872.38507 0.38507338 3692 P61221;D6R9I9;D6RGF4;H0Y990 ABCE1 ATP-binding cassette sub-family E member 1 yes no 0 0 0 1.5 0.5 1 1 45.477 45.518 2 0.0069312 12334 20230619_1881_Aki_TMTPro18x_K_F2 129.16 111.43 332740 291510 284820 272120 432980 520250 364800 370380 575460 90569 87929 82856 84976 71284 190490 108000 112480 83502 307440 266730 295520 279770 437080 503760 377790 381060 553370 107410 113180 84400 92036 75826 187070 106840 108170 79677 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 134390000 30707 3692 28851 57635;57636 46567;46568 46568 2 9606 Homo sapiens -0.05622375105599531 YCAQDAFFQVK Unmodified 1375.6231 0.62307182 1433 M0R248;A0A384MR44;Q13011 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes no 0 0 0 8 0 1 58.106 58.153 3 2.1121E-05 17037 20230619_1888_Aki_TMTPro18x_K_F8 113.67 90.95 90550 80396 93979 102490 91672 98770 122240 110980 109240 149960 164630 176270 171050 154150 143180 182170 170390 206430 83800 73764 95221 101650 96123 100450 121100 113620 114360 150170 166650 176990 173090 161200 147810 183850 163010 195680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89445000 30708 1433 28852 57637 46569 46569 1 9606 Homo sapiens -0.04971479033861215 YCDHENAAFK Unmodified 1253.5135 0.51352137 955;4255 A0A0A0MSK5;Q5JTV8;Q5JTV8-3;J3KN66;H0Y4R4;Q5JTV8-2;Q8NFQ8 TOR1AIP1;TOR1AIP2 Torsin-1A-interacting protein 1;Torsin-1A-interacting protein 2 no no 0 0 0 4 0 1 39.271 39.313 3 5.2221E-05 9236 20230619_1883_Aki_TMTPro18x_K_F4 124.1 97.505 100670 69430 90992 97946 123600 126160 122770 128790 148910 128780 140110 146550 146830 127900 117250 165500 171230 137030 92919 63836 93771 96921 125750 125480 124610 131340 149830 130720 144470 147400 148320 134450 122980 163990 163070 130580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 392540000 30709 955;4255 28853 57638 46570 46570 1 9606 Homo sapiens -0.10309484653203072 YCDPDSYHR Unmodified 1211.4666 0.46657118 2658 B5BU25;P26368-2;P26368 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 0 0 0 3 0.816 1 1 1 33.77 33.829 3 2.0246E-12 7108 20230619_1882_Aki_TMTPro18x_K_F3 226.47 219.61 74330 61881 76686 85435 87730 93051 86202 87346 93791 93622 101230 112700 95474 87741 86905 95816 121990 120870 68756 56839 77918 84415 90173 93378 87263 89809 95432 94845 103340 112640 97298 91755 90503 97531 116380 114540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 188430000 30710 2658 28854 57639;57640;57641 46571;46572 46572 2 9606 Homo sapiens -0.13070344204311368 YCDSILR Unmodified 925.43275 0.43275186 517 A0A024R8H6;Q15059;A0A140F1N4;Q15059-2 BRD3 Bromodomain-containing protein 3 yes no 0 0 0 6 0 1 44.315 44.407 2 0.0075742 11415 20230619_1886_Aki_TMTPro18x_K_F6 124.12 101.39 100670 81595 96804 99366 92099 104680 99077 100880 115700 116660 132580 118480 123460 110610 114130 133940 139940 134950 93048 74854 98599 98975 96276 105360 100060 103740 117590 117120 134720 120010 125900 115570 117750 134220 133610 128180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55149000 30711 517 28855 57642 46573 46573 1 9606 Homo sapiens -0.03294720905387294 YCFGVEDTLK Unmodified 1230.5591 0.55907458 2699 B7Z7P8;P62495-2;P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 5.5 0.5 1 1 56.396 56.464 2 1.1589E-06 16652 20230619_1886_Aki_TMTPro18x_K_F6 177.36 126.02 124870 124180 132520 146150 112410 128900 133230 146410 142040 185580 179270 157670 193420 152920 148190 221280 180630 206810 115680 113810 133770 145610 118910 132080 133520 149380 145900 184500 182600 161330 194730 161580 153700 220210 172700 196490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 333660000 30712 2699 28856 57643;57644 46574 46574 1 9606 Homo sapiens -0.0469825919080904 YCFPNYVGR Unmodified 1174.523 0.52296385 1483;3577 A0A384NQ21;P61163;R4GMT0;B4DM97;A0A1B0GVS3;P42025;Q13841 ACTR1A;ACTR1B Alpha-centractin;Beta-centractin no no 0 0 0 3 0 1 51.124 51.195 2 0.0029737 14667 20230619_1882_Aki_TMTPro18x_K_F3 104.45 90.29 174990 134490 141360 189220 169850 215260 183460 176640 224550 165720 154810 167450 196660 147480 163100 189230 171780 190390 161490 123600 147160 186780 174900 214680 185360 182900 223560 168280 164030 169250 197690 155100 167070 189470 164400 180750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 87669000 30713 1483;3577 28857 57645 46575 46575 1 9606 Homo sapiens -0.05731671576995723 YCFPNYVGRPK Unmodified 1399.6707 0.67069072 1483;3577 A0A384NQ21;P61163;R4GMT0;B4DM97;A0A1B0GVS3;P42025;Q13841 ACTR1A;ACTR1B Alpha-centractin;Beta-centractin no no 0 0 1 5.5 0.5 1 1 48.2 48.278 3 2.551E-12 13120 20230619_1886_Aki_TMTPro18x_K_F6 171.85 162.57 695660 590920 655360 680550 608580 643100 695330 708730 663940 580540 569700 432950 553440 439960 620620 645430 608050 503040 643100 541710 668480 679730 637810 654860 695330 716100 674260 589100 587630 447380 568400 464540 629330 637270 581170 479690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 464010000 30714 1483;3577 28858 57646;57647 46576 46576 1 9606 Homo sapiens -0.013157800430235511 YCHDLGER Unmodified 1048.4396 0.43962815 4412 Q9BQG0;Q9BQG0-2;I3L1L3 MYBBP1A Myb-binding protein 1A yes no 0 0 0 2.5 0.5 1 1 31.653 31.723 3 0.00030589 6391 20230619_1881_Aki_TMTPro18x_K_F2 134.48 96.318 62031 26094 59472 57216 79027 72374 76471 75545 80536 64682 74920 74345 74714 70518 56092 67478 79934 74181 57165 24213 60895 55385 80348 72080 77365 76653 81548 66271 77099 74915 75446 72679 58740 68212 76210 70408 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43069000 30715 4412 28859 57648;57649 46577 46577 1 9606 Homo sapiens -0.08265408024817589 YCHDNNIIHR Unmodified 1340.6044 0.60440207 1370 A0A2U3TZN6;A0A2U3TZM1;O14936;O14936-2;O14936-6;O14936-3;O14936-4;A0A2R8YEK3;Q5JS79;B7ZKY2;A0A2U3TZM4;A0A7I2RJN6;A0A2R8YE77;A0A2R8YFN5;A0A2R8YGH2;A0A2R8YEJ7 CASK Peripheral plasma membrane protein CASK yes no 0 0 0 6 0 1 30.603 30.635 4 0.00021282 6004 20230619_1886_Aki_TMTPro18x_K_F6 106.16 93.996 19523 5976.6 21187 26628 29402 23823 23654 23169 27944 24720 28962 30389 29590 25417 22805 24770 30471 28738 17995 5661.6 21528 25104 29668 24269 24318 23773 28264 25078 29695 30413 29864 26348 23741 25123 29068 27260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52334000 30716 1370 28860 57650 46578 46578 1 9606 Homo sapiens -0.05227595885048686 YCLHGEAGK Unmodified 1033.4651 0.46511462 3001 G1UI16;Q29RF7;Q29RF7-3;H0Y9L9 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 0 0 0 6.5 0.5 1 1 36.829 36.896 3 0.00020983 8283 20230619_1886_Aki_TMTPro18x_K_F6 111.61 76.886 68282 43416 69527 59362 88014 81975 82801 76153 89938 85459 88247 76137 92944 79320 69563 77005 105260 88236 63060 39919 70726 58950 89690 81070 83996 78429 91176 85617 90717 77842 93635 81629 73146 78037 100250 83751 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 110640000 30717 3001 28861 57651;57652 46579 46579 1 9606 Homo sapiens -0.05027933502401538 YCLPFLQPGR Unmodified 1249.6278 0.62776327 3579 P42285;A8K6I4;B4E3M6 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 0 0 0 5.5 0.5 1 1 61.061 61.113 2 0.00027954 18376 20230619_1885_Aki_TMTPro18x_K_F5 133.79 115.48 139530 115970 128930 127210 116530 140580 132020 136420 135800 136850 122050 100960 127230 102950 116630 163440 132630 115700 128960 106270 131670 127790 122540 141050 132390 139630 137650 137190 125970 104370 129180 109310 119930 160460 126630 110460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 213840000 30718 3579 28862 57653;57654 46580 46580 1 9606 Homo sapiens 0.012934498995718968 YCNTWPVAISMLASK Unmodified 1739.8375 0.83749805 3775 V9HW89;Q00796;B4DKI2 HEL-S-95n;SORD Sorbitol dehydrogenase yes no 0 0 0 5.5 0.5 1 1 64.051 64.097 3 9.1065E-08 19775 20230619_1885_Aki_TMTPro18x_K_F5 131.72 113.26 46052 43258 50210 52221 48306 52769 51174 55700 53492 44463 46569 46556 42758 39407 52650 49841 52999 43597 42654 39661 50640 52021 50381 53389 51532 56396 54063 45602 47967 46948 44259 41410 53365 49584 50640 41509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 326770000 30719 3775 28863 57655;57656 46581 46581 1 9606 Homo sapiens -0.002827200002684549 YCPEGVHK Unmodified 988.44365 0.44365089 1689 Q99986;A0A7P0TA65;A0A7P0T824;A0A7P0TA16;H0YJF7;A0A7P0TBE4;A8K245;A0A7P0T9E5;A0A7P0T838;A0A7P0TB15;A0A7P0T9T1;A0A7P0T952;A0A7P0T977;A0A7P0TAS8;A0A7P0T9I1;A0A7P0TBB8;A0A7P0T8N0;A0A7P0Z445;H0YJJ9;A0A7P0TAA6;A0A7P0T925;A0A7P0Z3Z7;A0A7P0Z462;A0A7P0Z4A4;H0YJ50;A0A7P0T9C6;A0A7P0TB08;A0A7P0T814;A0A7P0TBI6;A0A7P0TB37 VRK1 Serine/threonine-protein kinase VRK1 yes no 0 0 0 6 0 1 37.247 37.316 3 0.0014032 8435 20230619_1886_Aki_TMTPro18x_K_F6 114.89 65.081 90755 45599 86890 91159 95266 100510 94883 91504 105000 91648 112120 112650 111680 102660 99102 67658 133200 112890 83686 42195 88729 88356 98257 100660 96022 94140 106630 93291 114680 112980 113470 104400 102680 71209 126970 106820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88794000 30720 1689 28864 57657 46582 46582 1 9606 Homo sapiens -0.05103318531121204 YCQYAFDLK Unmodified 1206.5379 0.53794521 189 K7EIU8;A0A024R274;Q13485;K7EL18;K7EIJ2;B4DZP1;K7ES96;Q9BYG6;A0A087WUF3 SMAD4 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 4 yes no 0 0 0 8 0 1 57.015 57.067 3 0.00093632 16599 20230619_1888_Aki_TMTPro18x_K_F8 98.249 73.905 47264 37561 46297 42884 40506 49609 48261 47101 51256 52600 50879 46059 56435 45007 43249 63477 52517 56912 43689 34439 47008 42982 42777 49594 48319 48433 52054 52669 52419 47066 56782 47450 44838 63059 50188 54108 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104150000 30721 189 28865 57658 46583 46583 1 9606 Homo sapiens -0.057062244996814115 YCRPESQEHPEADPGSAAPYLK Unmodified 2501.1281 0.128137 1660 P40763;A0A7I2V4C8;A0A7I2V5N9;A0A7I2V444;A0A7I2V3V0;A0A7I2YQR5;B4DNP0;G8JLH9;B4DVR6;A0A7I2V4R2;P40763-3 STAT3 Signal transducer and activator of transcription 3;Signal transducer and activator of transcription yes no 0 0 1 4.5 0.5 1 1 42.995 43.057 4 7.3925E-08 10807 20230619_1885_Aki_TMTPro18x_K_F5 104.18 96.56 34618 29090 37079 39837 43951 58895 46823 50887 49664 53046 45011 48481 52266 41928 42881 50952 52381 54558 32035 26717 37601 39580 45256 57880 47137 52559 50302 53348 46739 49181 52660 43969 44338 51234 50041 51774 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 101180000 30722 1660 28866 57659;57660 46584;46585 46585 2 9606 Homo sapiens -0.062381943319905986 YCTDTGVLFR Unmodified 1230.5703 0.57030797 1198 J3K000;P12955;A0A8V8TLL9;A0A8V8TLP4;A0A140VJR2;A0A494C165;P12955-2;P12955-3;K7ES25;A0A8V8TLR1;A0A494C194;A0A8V8TN48;A0A8V8TNF2;A0A8V8TLP2;A0A8V8TN70;A0A8V8TM86 PEPD Xaa-Pro dipeptidase yes no 0 0 0 7.5 0.5 1 1 52.033 52.109 2 0.00016976 14426 20230619_1888_Aki_TMTPro18x_K_F8 173.69 154.59 156040 121100 116170 123410 117240 173210 136950 120700 239280 230710 220690 238280 241760 226740 201670 263020 251110 299350 143930 110930 121440 125100 122890 170140 140010 129880 237260 227680 228260 241060 244370 236170 208860 265560 240110 283760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 265270000 30723 1198 28867 57661;57662 46586;46587 46587 2 9606 Homo sapiens -0.035754370966515125 YCTTYQSK Unmodified 1049.4488 0.44879585 2649 H0Y9V7;B4E295;B4E2Q0;P98194-2;P98194-4;P98194;P98194-3;P98194-5;P98194-8;P98194-9;P98194-6;P98194-7;H0Y8X9;Q59G44;H0Y9S7 ATP2C1 Calcium-transporting ATPase;Calcium-transporting ATPase type 2C member 1 yes no 0 0 0 8 0 1 40.029 40.019 2 0.0021654 9481 20230619_1888_Aki_TMTPro18x_K_F8 131.06 107.63 22802 13101 32305 30463 35599 43964 27643 36668 35269 18516 28113 26518 25288 24775 36928 16284 33214 25737 21118 12145 32064 29480 36529 43209 28606 37452 35151 19962 29071 26509 26474 25159 37021 17103 31763 24372 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6167300 30724 2649 28868 57663 46588 46588 1 9606 Homo sapiens -0.07395059459145159 YCVDQNLLK Unmodified 1151.5645 0.56449431 3637 Q9BW75;Q96CV8;P52888;K7EP46;B4DU96 THOP1 Thimet oligopeptidase yes no 0 0 0 7.5 0.5 1 1 52.866 52.938 2;3 0.0005467 14892 20230619_1887_Aki_TMTPro18x_K_F7 105.78 78.686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30725 3637 28869 57664;57665 46589;46590 46589 2 9606 Homo sapiens -0.005225356083428778 YCVEEEEK Unmodified 1084.4383 0.43829074 2144;1327 A0A1W6S962;X5D7Q9;P78347-5;A0A0A0VEB4;C9J6M0;X5D2J9;A8K9W7;P78347;X5DR09;P78347-2;P78347-3;P78347-4;X5DNP5;Q499G6;X5D939;A0A8I5KVB5;A0A494C1K3;B4DH52 GTF2I;GTF2I-RARA General transcription factor II-I no no 0 0 0 1.5 0.5 1 1 42.061 42.1 2 0.0020058 11007 20230619_1880_Aki_TMTPro18x_K_F1 133.6 94.452 161730 93333 171290 190370 210180 234570 183880 199380 217670 188140 255760 246710 256000 222140 211790 128500 302120 256200 149350 86326 173890 184630 214570 232840 188080 205800 221220 192610 260510 246800 259230 225160 220610 138100 287880 242160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162630000 30726 1327;2144 28870 57666;57667 46591 46591 1 9606 Homo sapiens -0.10055086904276322 YCYGPQGR Unmodified 999.42325 0.4232498 467 A0A024R7P2;B7Z6M0;Q14318 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes no 0 0 0 7 0 1 36.018 36.086 2 0.010234 7746 20230619_1887_Aki_TMTPro18x_K_F7 99.384 81.475 16002 12397 16453 16573 19178 18311 17672 15174 25240 17097 21394 22393 20875 16422 19828 18734 26265 22903 14795 11386 16713 16413 19654 18319 18132 15784 25101 17357 22112 22285 21272 17267 20527 19026 25045 21721 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11828000 30727 467 28871 57668 46592 46592 1 9606 Homo sapiens -0.07648489190910368 YCYGPQGSR Unmodified 1086.4553 0.45527821 2262 B2R8G6;Q14318-2;M0R2K9;M0R2Q6 FKBP8 Peptidyl-prolyl cis-trans isomerase FKBP8;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 7.5 0.5 1 1 35.893 35.923 2 0.002464 7827 20230619_1888_Aki_TMTPro18x_K_F8 121.58 111.67 75392 46952 58921 67989 69061 76229 65266 69322 84990 70879 73496 73301 75377 59607 72948 77312 86981 61440 69483 43203 61422 67006 70910 76277 66643 71332 84984 71650 76031 73854 76748 62864 75008 76519 82910 58618 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89488000 30728 2262 28872 57669;57670 46593 46593 1 9606 Homo sapiens -0.08449121507783275 YCYYNETHK Unmodified 1276.5183 0.5182724 4491;3802 Q05CW7;E9PMU0;E9PJN6;Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 no no 0 0 0 6.5 0.5 1 1 39.317 39.393 3 3.789E-05 8992 20230619_1887_Aki_TMTPro18x_K_F7 150.08 126.7 292440 211760 305230 294770 355990 357340 326580 315390 393180 362360 407840 393140 414350 343550 350480 428650 480700 413480 270320 194630 309640 291640 364730 355670 333100 326370 397330 364750 417860 396200 419720 360510 365100 428320 458200 393130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 281150000 30729 3802;4491 28873 57671;57672 46594;46595 46595 2 9606 Homo sapiens -0.10892600510442207 YDAFGEDSSSAMGVENR Oxidation (M) 1849.7425 0.74247127 4712 Q9Y2X3;B3KN82 NOP58 Nucleolar protein 58 yes no 0 1 0 1.5 0.5 1 1 46.282 46.322 3 7.5812E-10 12734 20230619_1881_Aki_TMTPro18x_K_F2 140.46 133.57 84415 68885 76496 91304 78997 92287 83289 89551 94646 94621 104570 101440 103440 91334 103780 105580 104430 112770 77994 63248 78495 90348 82044 93160 84123 91813 96177 95560 106760 102360 105630 95295 105580 106270 99972 107000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 208440000 30730 4712 28874 57673;57674 46596;46597 46597 2873 2 9606 Homo sapiens -0.14841026728413453 YDAFGEDSSSAMGVENR Unmodified 1833.7476 0.74755665 4712 Q9Y2X3;B3KN82 NOP58 Nucleolar protein 58 yes no 0 0 0 2 0.816 1 1 1 50.964 51.003 3 4.7338E-48 14912 20230619_1881_Aki_TMTPro18x_K_F2 198.44 194.72 74836 55539 61174 68845 68769 68747 72050 76402 81989 69501 77130 70222 68502 70772 91716 84533 72156 73881 69054 50977 63429 68441 70905 69719 72775 77331 82722 70651 78994 71345 71359 73638 91740 84166 69240 70279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 391410000 30731 4712 28874 57675;57676;57677 46598 46598 1 9606 Homo sapiens -0.13596722865781885 YDALEVFAGSGTSGQR Unmodified 1656.7744 0.77436375 3917 Q15113;B4DPJ4;A4D2D2 PCOLCE Procollagen C-endopeptidase enhancer 1 yes no 0 0 0 6 0 1 58.93 58.995 3 5.8519E-05 17699 20230619_1886_Aki_TMTPro18x_K_F6 105.17 91.743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30732 3917 28875 57678 46599 46599 1 9606 Homo sapiens -0.027752461923000737 YDAVQHCR Unmodified 1047.4556 0.45561256 2732 C9J050;C9JEJ2;P49585;D3DXB2;B4E322;B2R8P1;H7C1T3;C9J2E1;H7BZN1 PCYT1A;hCG_2002711 Choline-phosphate cytidylyltransferase A yes no 0 0 0 4.5 0.5 1 1 29.413 29.485 3 0.00085368 5350 20230619_1883_Aki_TMTPro18x_K_F4 107.01 85.501 21079 14910 24020 24333 36823 36653 34500 36680 32846 34715 32260 33710 29005 30482 32451 24251 38735 32425 19497 13732 24352 23950 37119 36120 34866 37389 33559 35148 33009 34123 29916 31210 33234 24961 36957 30734 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49216000 30733 2732 28876 57679;57680 46600 46600 1 9606 Homo sapiens -0.06621701787935308 YDCVISSPR Unmodified 1095.5019 0.50189405 3283 O60568;Q9UG85;H7C2S8 PLOD3;DKFZp564O1822 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 yes no 0 0 0 5.5 0.5 1 1 42.732 42.821 2 0.0003105 10702 20230619_1886_Aki_TMTPro18x_K_F6 140.35 98.701 130030 105050 119590 127310 137060 140550 137960 143900 160640 125770 126720 114190 139480 102590 135060 148180 141360 116080 120150 96366 122650 126940 140970 141230 139750 146270 160950 127780 132110 116190 141660 108650 137830 146340 135020 110680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103610000 30734 3283 28877 57681;57682 46601 46601 1 9606 Homo sapiens -0.0420368167651759 YDDAIQLYDR Unmodified 1270.583 0.58298115 2045 Q53HG5;A8K4K9;Q15006;H0YAS9 EMC2 ER membrane protein complex subunit 2 yes no 0 0 0 2.5 0.5 1 1 52.156 52.222 2 1.0402E-06 15156 20230619_1882_Aki_TMTPro18x_K_F3 179.1 139.03 100850 87171 96503 98516 106920 127510 116330 100600 141680 92383 84785 92275 90960 72435 108630 100170 94022 99715 93251 79894 98582 98944 110600 126120 117440 104460 140510 93926 90045 93004 93463 76865 109300 100220 90140 94694 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86060000 30735 2045 28878 57683;57684 46602;46603 46603 2 9606 Homo sapiens -0.04148702432758 YDDEEFEYR Unmodified 1264.4884 0.48841206 3686 Q5T179;Q5T178;P61024 CKS1B Cyclin-dependent kinases regulatory subunit;Cyclin-dependent kinases regulatory subunit 1 yes no 0 0 0 1 0 1 47.079 47.079 2 0.00074435 13175 20230619_1880_Aki_TMTPro18x_K_F1 124.92 123.32 25369 17694 17406 22567 14910 26903 18626 20585 37133 32293 29683 42317 47348 40116 21611 58079 59376 75058 23375 16250 18348 22432 15929 26703 19132 21780 36492 32344 31622 42430 46591 42430 24718 58890 56554 71053 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28465000 30736 3686 28879 57685 46604 46604 1 9606 Homo sapiens -0.13325260974761477 YDDGRGPPGNPPR Unmodified 1396.6484 0.64837537 1997 A8K0M9;Q9Y6D0 SELK Selenoprotein K yes no 0 0 1 4 0 1 31.782 31.842 3 5.0141E-06 6234 20230619_1883_Aki_TMTPro18x_K_F4 112.51 94.195 12106 11167 12118 13164 19025 21266 19063 19072 19541 13811 17131 16011 19381 15440 13179 18382 20689 19032 11203 10237 12424 13235 19213 20835 19224 19486 19766 14319 17774 16154 19415 16106 13952 18445 19711 18076 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11637000 30737 1997 28880 57686 46605 46605 1 9606 Homo sapiens -0.03408288187051767 YDDMAAAMK 2 Oxidation (M) 1046.4049 0.40488213 3701;3535 V9HWD6;P31946-2;P31946;B5BU24;Q4VY20;Q4VY19;A0A0J9YWE8;Q59EQ2;P61981;B4DE78 HEL-S-1;YWHAB;YWHAG 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed no no 0 2 0 3 0.816 1 1 1 38.331 38.384 3 0.023245 8959 20230619_1882_Aki_TMTPro18x_K_F3 56.916 22.384 206700 121880 205100 235700 263030 262920 247130 234300 289620 221730 268440 293980 258870 213820 270340 175430 283490 270890 190790 112620 209500 228780 268030 263020 251350 241120 291570 227060 276230 292180 265000 221300 274870 182590 271020 256330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 181730000 30738 3535;3701 28881 57687;57688;57689 46606;46607 46607 2199;2200 2 9606 Homo sapiens -0.11646411947799606 YDDMAAAMK Oxidation (M) 1030.41 0.4099675 3701;3535 V9HWD6;P31946-2;P31946;B5BU24;Q4VY20;Q4VY19;A0A0J9YWE8;Q59EQ2;P61981;B4DE78 HEL-S-1;YWHAB;YWHAG 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed no no 0 1 0 3.5 0.5 2 2 44.032 44.088 2;3 0.0031635 11290 20230619_1883_Aki_TMTPro18x_K_F4 95.741 49.613 258530 191040 245300 254960 273230 288950 293390 294560 318910 310680 364390 356950 335180 286560 325930 315690 365070 334150 238810 175490 250760 252680 282060 289730 295500 300960 325160 314470 370410 357880 342580 299440 333680 317880 348710 317290 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 556530000 30739 3535;3701 28881 57690;57691;57692;57693 46608;46609;46610 46609 2199;2200 3 9606 Homo sapiens -0.10402108085190775 YDDMAAAMK Unmodified 1014.4151 0.41505288 3701;3535 V9HWD6;P31946-2;P31946;B5BU24;Q4VY20;Q4VY19;A0A0J9YWE8;Q59EQ2;P61981;B4DE78 HEL-S-1;YWHAB;YWHAG 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed no no 0 0 0 4.5 0.5 1 1 50.837 50.891 3 0.0043501 14139 20230619_1885_Aki_TMTPro18x_K_F5 67.563 50.237 412970 343220 398650 422340 355070 492760 445500 405850 495230 476610 543880 563300 554410 438760 519820 562920 537110 540950 381790 314870 405790 420880 375530 490700 445520 422720 503480 480590 556350 563720 563590 463300 530390 562360 513770 514020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 651750000 30740 3535;3701 28881 57694;57695 46611;46612 46612 2 9606 Homo sapiens -0.09157804222570576 YDDMAACMK 2 Oxidation (M) 1135.3984 0.39841654 2805 D0PNI1;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1;Q6LD62 YWHAZ;14-3-3 protein 14-3-3 protein zeta/delta yes no 0 2 0 2.5 0.5 1 1 38.098 38.156 3 0.024068 8984 20230619_1881_Aki_TMTPro18x_K_F2 56.258 48.659 69003 48153 67614 65361 65655 61387 70286 68620 78504 85049 91296 83336 91235 79319 86509 75932 95291 93195 63736 44252 68739 64557 68394 62569 70883 70049 80051 85008 93015 84531 92898 81804 88472 77369 91074 88341 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 542530000 30741 2805 28882 57696;57697 46613 46613 1674;1675 1 9606 Homo sapiens -0.1638667317083673 YDDMAACMK Oxidation (M) 1119.4035 0.40350192 2805 D0PNI1;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1;Q6LD62 YWHAZ;14-3-3 protein 14-3-3 protein zeta/delta yes no 0 1 0 3.5 0.5 2 2 42.852 42.907 2;3 0.0029173 10726 20230619_1883_Aki_TMTPro18x_K_F4 78.934 72.081 366700 266440 338190 354920 340800 337270 342190 320700 365440 403200 463440 439990 459630 375470 429910 442730 477570 425580 338620 244760 345960 350900 353580 342120 345830 331160 375020 404120 470560 442900 467680 393010 440360 442880 456120 404590 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 872630000 30742 2805 28882 57698;57699;57700;57701 46614;46615;46616 46616 1674;1675 3 9606 Homo sapiens -0.15142369308250636 YDDMAACMK Unmodified 1103.4086 0.4085873 2805 D0PNI1;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1;Q6LD62 YWHAZ;14-3-3 protein 14-3-3 protein zeta/delta yes no 0 0 0 4.5 0.5 1 1 49.104 49.161 2 0.00067475 13551 20230619_1883_Aki_TMTPro18x_K_F4 140.5 103.03 571840 426650 516340 494980 400600 502370 491650 461000 489780 713430 700180 706000 757530 623870 638490 740630 727260 645290 528050 391350 527270 494560 428240 506520 490790 480690 508420 706880 710970 714060 765450 652370 656780 736860 694410 614210 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1212900000 30743 2805 28882 57702;57703 46617;46618 46617 2 9606 Homo sapiens -0.13898065445619068 YDDMASAMK 2 Oxidation (M) 1062.3998 0.39979675 145 A0A024R1K7;Q04917;B2R6N6;F8WEB6;A2IDB1 YWHAH 14-3-3 protein eta yes no 0 2 0 3 0 1 37.443 37.496 2 0.086802 8582 20230619_1882_Aki_TMTPro18x_K_F3 54.712 46.172 30284 24083 27930 29225 34067 36139 32884 32494 38742 37286 51296 49490 44956 35167 36602 35504 45779 41069 27979 22095 28667 29182 34870 35942 33415 33579 39610 37792 51731 49193 45661 36777 37864 35995 43680 38965 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15372000 30744 145 28883 57704 46619 46619 62;63 1 9606 Homo sapiens -0.12890715810408437 YDDMASAMK Oxidation (M) 1046.4049 0.40488213 145 A0A024R1K7;Q04917;B2R6N6;F8WEB6;A2IDB1 YWHAH 14-3-3 protein eta yes no 0 1 0 3 0 1 42.075 42.138 2 0.012664 10504 20230619_1882_Aki_TMTPro18x_K_F3 73.157 29.708 104240 65241 102530 107380 112150 113480 111100 116500 130280 131490 153930 150590 160010 134640 126600 126560 169030 158480 96233 60127 104450 105020 115640 114330 112720 119200 132590 132660 157010 151440 161530 139040 131650 129110 161250 150220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 48915000 30745 145 28883 57705 46620;46621 46620 62;63 2 9606 Homo sapiens -0.11646411947799606 YDDMASAMK Unmodified 1030.41 0.4099675 145 A0A024R1K7;Q04917;B2R6N6;F8WEB6;A2IDB1 YWHAH 14-3-3 protein eta yes no 0 0 0 4.5 0.5 2 2 49.396 49.452 2;3 0.00012571 13505 20230619_1885_Aki_TMTPro18x_K_F5 151.44 32.268 385140 268260 327070 372310 286500 361960 356830 340420 404080 457810 432970 463270 523210 405240 389530 523090 524410 471740 355350 246590 336790 367180 303240 366140 357230 352530 410510 456490 446890 468010 524620 426270 406600 520510 500090 448800 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 323510000 30746 145 28883 57706;57707;57708;57709 46622;46623;46624 46624 3 9606 Homo sapiens -0.10402108085190775 YDDMATCMK 2 Oxidation (M) 1165.409 0.40898123 3511 P27348;E9PG15;Q53RR5;Q3YBA8 YWHAQ 14-3-3 protein theta yes no 0 2 0 3 0.816 1 1 1 37.943 37.997 3 0.012742 8716 20230619_1882_Aki_TMTPro18x_K_F3 65.305 51.399 70111 42875 70334 73142 88488 85466 83225 75027 87361 74382 90310 91246 96852 79409 85414 77805 100640 90045 64729 39538 71705 71489 90228 85236 84336 77389 88850 75755 92814 91457 98083 82239 87844 78937 96070 85434 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 436670000 30747 3511 28884 57710;57711;57712 46625 46625 2176;2177 1 9606 Homo sapiens -0.16710690516401883 YDDMATCMK Oxidation (M) 1149.4141 0.4140666 3511 P27348;E9PG15;Q53RR5;Q3YBA8 YWHAQ 14-3-3 protein theta yes no 0 1 0 3.6 0.49 2 3 42.814 42.867 3 0.0032134 10675 20230619_1882_Aki_TMTPro18x_K_F3 76.465 62.559 388410 297920 379640 382690 398290 431110 411130 392130 514510 490300 539340 513250 554240 470790 482710 516450 563560 508910 358950 273520 386660 380140 412680 431410 417030 405980 519250 491110 552580 518610 561820 489430 496720 517810 538050 483650 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 817910000 30748 3511 28884 57713;57714;57715;57716;57717 46626;46627;46628;46629 46626 2176;2177 4 9606 Homo sapiens -0.15466386653793052 YDDMATCMK Unmodified 1133.4192 0.41915198 3511 P27348;E9PG15;Q53RR5;Q3YBA8 YWHAQ 14-3-3 protein theta yes no 0 0 0 4.29 1.03 2 2 2 1 48.154 48.222 2;3 0.00012571 12977 20230619_1885_Aki_TMTPro18x_K_F5 151.44 140.61 410050 301010 350940 348100 336940 445520 381810 364040 435590 543330 502750 537620 622060 500990 451730 623050 638440 553240 378470 276120 361270 349000 353090 441150 384130 382280 444080 539280 517950 544690 622970 524480 473540 619770 608460 526520 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1163700000 30749 3511 28884 57718;57719;57720;57721;57722;57723;57724 46630;46631;46632 46632 3 9606 Homo sapiens -0.1422208279118422 YDDPEVQK Unmodified 992.44509 0.44509068 1488 P38646;D6RCD7;A0A384P5G6;V9HW84;B7Z4V2;A0A7I2V2G2;Q8N1C8;A0A7I2YQB2;A0A7I2V2S7;A0A7I2V3F7;B7Z1V7;H0Y8K0;A0A3B3ITI4 HSPA9;HEL-S-124m Stress-70 protein, mitochondrial yes no 0 0 0 2 0.816 1 1 1 42.313 42.361 2 0.0049662 10906 20230619_1881_Aki_TMTPro18x_K_F2 127.46 89.224 86606 46096 106470 113030 132690 144220 120300 127320 123120 95886 163260 176750 151410 141520 157050 75276 172200 166990 80059 42796 106940 108910 135320 142940 122170 130420 126680 101080 165220 174430 155230 143660 159960 82137 164570 157650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75430000 30750 1488 28885 57725;57726;57727 46633 46633 1 9606 Homo sapiens -0.051434059613711725 YDDYHHER Unmodified 1133.4526 0.45263568 3094 H7C561;H7C0N4;L0R8E5 SF1 yes no 0 0 0 1 0 2 23.433 23.433 3 0.0054042 3897 20230619_1880_Aki_TMTPro18x_K_F1 85.731 65.427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30751 3094 28886 57728;57729 46634;46635 46634 2 9606 Homo sapiens -0.10875253641097515 YDDYSSSR Unmodified 991.3883 0.38830408 3564;3963 P38159;P38159-2;B4E352;B3KRG5;H3BUY5;Q96E39;Q2VIN3 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 no no 0 0 0 1.5 0.5 1 1 34.444 34.501 2 1.4177E-20 7765 20230619_1880_Aki_TMTPro18x_K_F1 214.11 191.62 98164 42817 122580 128800 188840 200590 141800 190640 117490 97563 179820 206310 143240 155460 174440 47201 199340 178790 90692 39980 123510 123760 189440 196940 145150 192800 123400 106820 180220 202550 149030 156280 177470 56991 190350 168500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 464250000 30752 3564;3963 28887 57730;57731 46636;46637 46636 2 9606 Homo sapiens -0.1077345351789063 YDEAASYIQSK Unmodified 1273.5826 0.5826468 3385 P04899-4;P04899;Q96C71;P04899-2;B3KX51;P04899-6;P04899-3;P04899-5;B3KP24;Q6LCB5 GNAI2;WUGSC:H_LUCA15.1 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes no 0 0 0 6 0 1 51.875 51.952 2 0.00029494 14745 20230619_1886_Aki_TMTPro18x_K_F6 129.38 115.22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30753 3385 28888 57732 46638 46638 1 9606 Homo sapiens -0.04320122152626027 YDECLAVYR Unmodified 1187.5281 0.5281088 3327 V9HWK0;O76094;Q86X80;A0PJJ5;Q0D2M6;O76094-2;Q71V07;R4GNC1;D6RDY6 HEL103;SRP72 Signal recognition particle subunit SRP72 yes no 0 0 0 4 0.816 1 1 1 48.168 48.233 2 0.00055931 13357 20230619_1882_Aki_TMTPro18x_K_F3 150.05 127.91 303090 241130 238060 309510 280100 290460 337640 333240 309740 364670 341500 344080 387710 349260 316040 429510 411760 374470 279710 221350 248330 306650 289020 296180 336190 338340 318740 366090 350930 350550 391050 364200 328530 426940 392790 356390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 374340000 30754 3327 28889 57733;57734;57735 46639;46640 46639 2 9606 Homo sapiens -0.05815412505035056 YDEEFQR Unmodified 985.41412 0.4141249 1462 A0A384NKW7;P55060-3;P55060;B4DUC5;B4DS32;B4DM67 CSE1L Exportin-2 yes no 0 0 0 1.5 0.5 1 1 40.175 40.21 2 0.02054 9931 20230619_1881_Aki_TMTPro18x_K_F2 104.45 78.064 51135 30415 39871 48201 51866 49480 52649 53340 66252 57733 62781 67056 68826 63205 48190 66948 77955 73276 47117 28024 41662 47206 52933 50023 53446 54346 66570 58415 64839 67514 69137 65506 51108 67519 74266 69548 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 407220000 30755 1462 28890 57736;57737 46641 46641 1 9606 Homo sapiens -0.07916559275599866 YDEELEGERPHSFR Unmodified 1762.7911 0.79107644 3252 O43290;B4DDH9 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 0 0 1 1 0 1 39.539 39.539 4 2.2243E-11 9883 20230619_1880_Aki_TMTPro18x_K_F1 150.12 138.5 33165 33246 45582 41732 65024 75625 51474 55668 90121 42334 54074 63563 45986 43743 54566 48176 55310 69711 30804 30487 45545 41879 65715 73417 53851 57863 88017 44254 56888 62869 47651 46006 55347 49562 53013 65931 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 84852000 30756 3252 28891 57738 46642 46642 1 9606 Homo sapiens -0.059807453063513094 YDEMVESMK 2 Oxidation (M) 1162.4522 0.45222625 3709 V9HW98;P62258;G9K389;G9K388;B4DJB0;B4DJF2;I3L3T1 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 2 0 2.5 0.5 1 1 40.608 40.675 3 0.013324 10118 20230619_1881_Aki_TMTPro18x_K_F2 64.841 58.151 59981 45887 53527 55227 61345 66847 59354 61127 79828 70104 89995 74582 72775 65204 80534 86815 83329 92209 55391 42101 55034 55164 63094 66591 60609 63070 80498 70534 91002 75290 75210 68706 81953 87170 79763 87490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88548000 30757 3709 28892 57739;57740 46643 46643 2395;2396 1 9606 Homo sapiens -0.122501774674447 YDEMVESMK Unmodified 1130.4624 0.46239701 3709 V9HW98;P62258;G9K389;G9K388;B4DJB0;B4DJF2;I3L3T1 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 0 0 4 0 1 54.334 54.35 2 3.9048E-07 15943 20230619_1883_Aki_TMTPro18x_K_F4 152.34 110.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30758 3709 28892 57741 46644 46644 1 9606 Homo sapiens -0.09761569742227039 YDEMVESMKK Unmodified 1258.5574 0.55736002 3709 V9HW98;P62258;G9K389;G9K388;B4DJB0;B4DJF2;I3L3T1 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 0 1 6 0.816 1 1 1 51.452 51.529 3 0.00057047 14573 20230619_1886_Aki_TMTPro18x_K_F6 102.53 97.73 514740 422970 469570 505410 408430 519770 455480 449390 502750 652840 643330 592700 601370 515530 600810 555640 592090 560230 475630 387940 480080 503830 431040 522850 458310 469460 515730 646830 651320 601580 614950 536520 610210 558230 566370 532170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 514640000 30759 3709 28893 57742;57743;57744 46645 46645 1 9606 Homo sapiens -0.06157636271063893 YDESDNAFIR Unmodified 1228.536 0.53603095 3189 M0QXU7;Q9UPE4;Q53G69;O43615 TIMM44;hTIM44 Mitochondrial import inner membrane translocase subunit TIM44 yes no 0 0 0 2 0 1 47.24 47.315 2 1.3096E-06 13181 20230619_1881_Aki_TMTPro18x_K_F2 182.65 154.47 57650 41898 47624 56743 56158 61729 59665 57792 76503 70723 62274 70943 77574 65852 66454 83774 78613 102440 53193 38496 49398 56127 57800 61946 60452 59664 76449 70815 65288 71822 78180 69085 68545 84873 75264 97017 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72574000 30760 3189 28894 57745 46646 46646 1 9606 Homo sapiens -0.06909561983911772 YDEVLHMVR Unmodified 1160.5648 0.56482866 3647 P53621;A0A3B3IT15;P53621-2;A0A3B3IU89 COPA Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 6 0 1 50.067 50.144 3 5.1609E-05 13969 20230619_1886_Aki_TMTPro18x_K_F6 144.9 132.32 59895 48559 55591 56400 48738 61098 51487 51328 71322 61729 69411 64146 73345 61347 57555 72905 80463 72645 55347 44527 56730 56384 51349 61198 52390 53402 71427 61945 71415 64954 73998 63990 60148 73018 76711 69030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26318000 30761 3647 28895 57746 46647 46647 1 9606 Homo sapiens -0.009031158884681645 YDEYVNVK Unmodified 1028.4815 0.48147619 3981 Q4W4Y1;Q8WUM4;Q8WUM4-2;B4DHD2;B7Z5C1 DRIP4;PDCD6IP Programmed cell death 6-interacting protein yes no 0 0 0 4.5 0.5 1 1 49.171 49.228 2 0.0021673 13410 20230619_1885_Aki_TMTPro18x_K_F5 131.03 99.659 122170 99158 114960 120830 126190 135600 134050 122750 150140 172550 203430 197150 216910 174630 161750 215030 225490 217950 112910 90967 117580 120440 130390 135740 135230 127660 154240 172450 206680 198340 218300 183050 169260 215440 215080 207010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150800000 30762 3981 28896 57747;57748 46648;46649 46649 2 9606 Homo sapiens -0.03162529064661612 YDFTSSR Unmodified 874.3821 0.38209649 1467 B3KM97;A0A384NL45;Q9NZ01;B3KSQ1;M0R2N5 TECR Very-long-chain enoyl-CoA reductase yes no 0 0 0 5 0.816 1 1 1 40.966 41.041 2 0.0056347 9936 20230619_1885_Aki_TMTPro18x_K_F5 139.31 89.187 443800 359930 427090 437140 523630 558680 577320 582780 675480 567520 638650 710650 648840 579240 686220 634910 726220 684860 410220 330190 436830 436830 537640 556280 581880 593160 680730 578820 658110 710280 663910 604600 699020 640180 694170 650100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 619720000 30763 1467 28897 57749;57750;57751 46650;46651 46650 2 9606 Homo sapiens -0.06011926958751701 YDGHLPIEIK Unmodified 1183.6237 0.62372375 426 P43490;A0A024R718;A0A7P0T9I9;A0A7P0T8L3;A0A7P0T973;A0A7P0TAS5;A0A7P0T931;A0A7P0T862;A0A7P0T8D2;A0A0C4DFS8;A0A7P0TA73;A0A7P0TBB7;A0A7P0T941;A0A7P0Z466;B7Z8W6;A0A7P0Z4N0;A0A7P0T9F0;A0A7P0TB17;A0A7P0T8Z3;A0A7P0T8R4;A0A7P0TAI8 NAMPT;PBEF1 Nicotinamide phosphoribosyltransferase yes no 0 0 0 6.5 0.5 1 1 52.171 52.247 3 0.00020127 14843 20230619_1886_Aki_TMTPro18x_K_F6 118.4 70.12 258950 223280 236930 287460 250030 258610 285750 267080 313260 306810 300230 320740 347170 296170 315360 393150 358480 401500 239360 204900 243010 284590 259530 263950 286850 273480 317160 308390 310880 324230 351400 311470 324060 393730 342870 381100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 275580000 30764 426 28898 57752;57753 46652;46653 46652 2 9606 Homo sapiens 0.039256836774939075 YDGIILPGK Unmodified 974.54368 0.54368251 3733 Q5VVC8;Q08ES8;Q5VVD0;P62913-2;P62913 RPL11 60S ribosomal protein L11 yes no 0 0 0 8 0 1 57.374 57.426 3 0.022673 16739 20230619_1888_Aki_TMTPro18x_K_F8 62.262 33.863 17258 13528 19924 19399 13850 23469 21154 17387 25585 19200 22508 22276 23516 24979 28713 24186 34505 32632 15974 12434 19936 19153 15125 23256 21037 18248 25658 19431 23296 22575 24262 25627 29397 24804 32945 30911 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9078000 30765 3733 28899 57754 46654 46654 1 9606 Homo sapiens 0.055392420743373805 YDGKWEVEEMK Unmodified 1412.6282 0.62821678 1700 P27824-2;P27824;A0A7P0TAE9;A0A7P0T937;A0A7P0TB65;A0A7P0T840;A0A7P0T8G1;A0A7P0T9L0;A0A7P0Z4D6;A0A7P0Z484;A0A7P0TAR9;A0A7P0Z4H2;Q16094;A0A7P0TAN9;A0A7P0T8N1;D6RAU8 CANX Calnexin yes no 0 0 1 4.5 1.12 1 1 1 1 52.372 52.43 3 0.0081177 14780 20230619_1885_Aki_TMTPro18x_K_F5 70.54 50.444 258790 218940 260830 263200 214460 304270 297880 303380 364860 378810 345780 398810 427290 379640 367130 460790 480100 482980 239360 200790 264230 262780 229270 304390 297610 311940 367350 379420 359590 403210 430910 396500 381120 462700 458290 458490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 712260000 30766 1700 28900 57755;57756;57757;57758 46655 46655 1 9606 Homo sapiens -0.061592199618871746 YDGLVGMFDPK Unmodified 1240.5798 0.57981002 1641;1343 P12081;P12081-4;E7ETE2;A0A6Q8PHA5;A0A6Q8PFF2;Q52NV4;P12081-2;P12081-3;A0A6Q8PF47;A0A6Q8PHE3;B4DDD8;B3KWE1;B4E1C5;A0A6Q8PF07;B4DEA2;B4DDN8;D6RB22;B4DQ67;A0A2R8Y6I1;A0A2R8Y3N3;B2R7G6;A0A2R8Y5P7;P49590-2;P49590;B4DSY5 HARS;HRS;HARS2 Histidine--tRNA ligase, cytoplasmic;Probable histidine--tRNA ligase, mitochondrial no no 0 0 0 7.5 0.5 1 1 62.681 62.711 3 0.00064454 19048 20230619_1887_Aki_TMTPro18x_K_F7 78.903 54.111 163190 148000 170790 180310 140100 186900 193680 191600 200280 224310 194080 238070 236490 204990 212150 251500 236450 254640 151060 135720 172520 179550 149590 188530 192410 196300 203610 225290 201610 239790 238920 214990 217710 252050 226130 241750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 343990000 30767 1641;1343 28901 57759;57760 46656 46656 1 9606 Homo sapiens -0.03085668811127107 YDGQVAVFGSDLQEK Unmodified 1654.7839 0.7838658 134 A0A024R1A3;P22314-2;P22314 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 4 1 1 1 58.018 58.048 2;3 5.6478E-06 17088 20230619_1885_Aki_TMTPro18x_K_F5 156.6 133.22 121510 92329 109380 130560 91603 109340 120680 126700 153660 146270 146400 141500 160600 151800 157460 172510 140800 154840 112210 84858 111990 128390 97477 112520 121040 128780 154380 146670 151160 144280 163390 157250 159340 172020 134970 147200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80996000 30768 134 28902 57761;57762 46657;46658 46658 2 9606 Homo sapiens -0.017334779067596173 YDGSTIVPGEQGAEYQHFIQQCTDDVR Unmodified 3112.3832 0.38324207 1447 Q14019;A0A384MTY2 COTL1 Coactosin-like protein yes no 0 0 0 4.5 1.12 2 2 2 2 57.448 57.49 3;4 2.4826E-49 16843 20230619_1885_Aki_TMTPro18x_K_F5 222.03 204.95 97666 86953 96179 98092 104840 118880 145400 134840 128000 164970 155350 143340 170190 139470 138370 179000 159630 168040 90348 79685 98017 98478 109230 119010 143680 137410 132650 164360 158660 146430 171670 146130 142670 178510 152590 159690 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1439300000 30769 1447 28903 57763;57764;57765;57766;57767;57768;57769;57770 46659;46660;46661;46662 46661 4 9606 Homo sapiens -0.08845422445074291 YDHQAEEDLR Unmodified 1274.5527 0.55274365 3933 Q15417;Q15417-3 CNN3 Calponin-3 yes no 0 0 0 1 0 1 34.703 34.703 3 3.4157E-10 7842 20230619_1880_Aki_TMTPro18x_K_F1 208.56 175.95 69115 7480.2 49851 63763 47429 38241 50726 54021 79743 85504 102200 109250 126050 114340 38267 124600 86876 111460 63415 7439.3 52261 59311 49543 40896 51883 54977 80512 85461 104730 110030 123780 118240 43631 124070 82822 105910 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280610000 30770 3933 28904 57771 46663 46663 1 9606 Homo sapiens -0.07355061097950966 YDHQQFK Unmodified 964.44028 0.44028008 2571 B4DQG8;Q9NPF5;Q5TG38;Q5TG39;Q5TG40 DMAP1 DNA methyltransferase 1-associated protein 1 yes no 0 0 0 6 0 1 36.86 36.929 3 0.015207 8307 20230619_1886_Aki_TMTPro18x_K_F6 84.498 52.277 119360 40710 100620 119570 140850 139530 139190 140110 190030 113070 147320 143010 139580 122640 126320 95919 158600 138240 109820 38065 104480 114360 143080 139450 141920 142380 188710 116780 152760 143110 142140 125790 130280 99311 151300 130920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49681000 30771 2571 28905 57772 46664;46665 46664 2 9606 Homo sapiens -0.04336245313470499 YDIEFEDK Unmodified 1057.4604 0.4604064 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;Q86SE4;Q7Z2J8 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 2.5 0.5 1 1 53.653 53.694 2 0.0049843 16045 20230619_1881_Aki_TMTPro18x_K_F2 123.98 90.863 209330 153770 176050 200910 105240 120910 187130 181970 210490 282120 296500 346070 354520 301900 263240 367440 332920 366540 193190 141220 180700 198030 117240 129760 184770 184500 216790 281510 302940 346810 355660 316280 273720 367830 318100 348020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 180900000 30772 2005 28906 57773;57774 46666 46666 1 9606 Homo sapiens -0.06602539164191512 YDLASHLGIR Unmodified 1143.6037 0.60365701 2924 E9PJP2;Q5TF21;A0A994J4H7;A5PLQ8;A1L177;H3BRB8 SOGA3;C6orf174 Protein SOGA3 yes no 0 0 0 1.33 0.471 2 1 49.375 49.404 3 1.2035E-11 14133 20230619_1880_Aki_TMTPro18x_K_F1 177.58 135.47 37101 35580 39107 41530 25797 30145 27269 26854 30289 43040 49495 53919 48865 48166 55839 49099 58829 73891 34358 32608 39363 41309 27901 31288 27558 28134 31492 42943 49900 54023 50263 49931 56789 50727 56363 69864 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 157910000 30773 2924 28907 57775;57776;57777 46667;46668 46667 2 9606 Homo sapiens 0.03759932737557392 YDLDFKSPDDPSR Unmodified 1553.6998 0.69980182 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2 ENO1 Alpha-enolase;Enolase yes no 0 0 1 5 0.816 1 1 1 50.161 50.223 3 8.4009E-07 14083 20230619_1883_Aki_TMTPro18x_K_F4 143.58 132.47 1074800 1229400 1395600 1232600 1402800 511090 1483700 1194200 287640 1522100 1573100 722960 681810 504730 1972500 394720 406350 217460 998720 1124600 1388900 1237200 1446300 591260 1455800 1182600 415990 1492400 1511600 763380 782210 522890 1888000 393960 402620 209110 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1119900000 30774 293 28908 57778;57779;57780 46669;46670 46669 2 9606 Homo sapiens -0.05490009003642626 YDLPASYK Unmodified 955.4651 0.46509784 2719 F5H4E8;B8ZZY8;H7C0M7;E7EMN2;B8ZZE3;B8ZZC8;Q9NRN9 METTL5 Methyltransferase-like protein 5 yes no 0 0 0 7 0 1 50.116 50.197 2 0.0091343 13525 20230619_1887_Aki_TMTPro18x_K_F7 113.26 56.844 66869 47469 54204 63334 56482 65141 62052 59412 67024 77683 87886 78628 79617 70915 72877 95110 90625 90827 61684 43612 56206 62658 58692 65592 62415 61597 68855 77547 88756 79583 81231 74665 75331 94877 86539 86312 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152630000 30775 2719 28909 57781 46671 46671 1 9606 Homo sapiens -0.01441610230756396 YDLTPAIQTTSTLYER Unmodified 1870.9313 0.93125832 2449 B3LEU8;Q6NUQ4-2;Q6NUQ4;B4DLT7;B4DKI3;H7C0H8 TMEM214 Transmembrane protein 214 yes no 0 0 0 7 0 1 58.89 58.94 3 6.1818E-11 17374 20230619_1887_Aki_TMTPro18x_K_F7 146.27 118.41 39122 31385 40509 36086 31567 42820 32597 35636 45916 35737 30671 34377 40927 33811 41164 37884 40710 37400 36182 28778 40874 36160 33612 42610 33244 36898 45411 36104 32671 34930 41457 35119 41807 37992 38932 35540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59112000 30776 2449 28910 57782 46672 46672 1 9606 Homo sapiens 0.030629939073833157 YDLTVPFAR Unmodified 1080.5604 0.56039521 1641;1343 P12081;P12081-4;E7ETE2;A0A6Q8PHA5;A0A6Q8PFF2;Q52NV4;P12081-2;P12081-3;A0A6Q8PF47;B3KWE1;A0A6Q8PF07;A0A6Q8PFG9;A0A6Q8PFN6;A0A2R8Y6I1;A0A2R8Y3N3;B2R7G6;A0A2R8Y5P7;P49590-2;P49590;D6RJE6;A0A2R8Y4X6;A0A2R8Y5E8 HARS;HRS;HARS2 Histidine--tRNA ligase, cytoplasmic;Probable histidine--tRNA ligase, mitochondrial no no 0 0 0 4.5 3.5 1 1 57.392 57.417 2 6.1191E-07 17412 20230619_1880_Aki_TMTPro18x_K_F1 193.16 146.34 325990 292020 306170 328160 317450 378050 386660 377490 402600 409980 393890 404380 451540 376580 410620 487610 420990 473310 301460 267590 313050 329190 330900 378480 386310 386510 409070 412410 407190 409960 457020 395280 419290 487180 403060 449510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 435250000 30777 1641;1343 28911 57783;57784 46673;46674 46673 2 9606 Homo sapiens 0.023337429602634074 YDNGSGYR Unmodified 930.38316 0.38315913 3811 Q08211;B3KU66;Q08211-2 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 3.5 0.5 1 1 32.424 32.488 2 0.0069308 6558 20230619_1882_Aki_TMTPro18x_K_F3 109.11 91.724 13280 6906.4 20744 14840 25378 31252 18748 27370 20603 17328 28754 27887 23565 24954 28173 10933 25395 24174 12309 6397.3 20487 14544 25824 30234 19385 27919 21185 18372 28895 27720 24455 25087 28316 12017 24316 22824 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12933000 30778 3811 28912 57785;57786 46675 46675 1 9606 Homo sapiens -0.08481712589855306 YDNHPDPAFGVAR Unmodified 1457.6688 0.66877646 2992;1727 F8W8C1;Q6ZTA4;Q6ZTA4-2;A0A804HIL7;Q9C026;Q9C026-4 TRIM67;TRIM9 Tripartite motif-containing protein 67;E3 ubiquitin-protein ligase TRIM9 no no 0 0 0 4 0 1 40.934 40.977 3 0.00011288 9960 20230619_1883_Aki_TMTPro18x_K_F4 85.323 66.248 81634 64061 79850 72711 87015 96609 87192 94906 106970 97835 115160 99569 109920 89500 115700 100620 103230 104410 75452 58737 81326 73077 89858 95846 88555 97093 108130 98787 117450 100720 112570 93270 116780 101210 98901 99123 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122290000 30779 2992;1727 28913 57787 46676 46676 1 9606 Homo sapiens -0.04175117527256589 YDPGALVIPFSGALELK Unmodified 1788.9662 0.96618726 3129 J3KQ32;Q9NTK5;Q53SQ6;Q9NTK5-2 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 0 1.5 0.5 1 1 65.412 65.415 3 3.8625E-06 20984 20230619_1881_Aki_TMTPro18x_K_F2 99.451 81.534 6026 5415.1 5365.5 5277.3 4573.7 7135.1 5966.1 5560.1 8996.5 7142.8 7660.8 10758 10862 9367.1 5288.4 12396 14399 17654 5570.5 4956.1 5495.8 5368.1 4874.8 7035.7 6026.4 5833.6 8936.1 7251 8075.2 10708 10732 9874.8 6018.3 12676 13711 16700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27967000 30780 3129 28914 57788;57789 46677 46677 1 9606 Homo sapiens 0.10326281505967927 YDPNVYSIK Unmodified 1097.5393 0.53932542 1811 B4DYQ7;A0A8V8TKU8;A0A8V8TKT8;A0A8V8TLW9;A0A8V8TKG0;A0A8V8TKI2;A0A8V8TLW4;L7RXH0;A5YM53;P06756-3;P06756-2;P06756;A0A8V8TKF7;A0A8V8TLN8 ITGAV Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain yes no 0 0 0 7 0 1 52.07 52.144 2 0.050264 14543 20230619_1887_Aki_TMTPro18x_K_F7 61.78 33.605 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30781 1811 28915 57790 46678 46678 1 9606 Homo sapiens -0.005542671392504417 YDPPLEDGAMPSAR Oxidation (M) 1533.677 0.67695789 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;B1AK85;A0A6I8PRV6 CAPZB F-actin-capping protein subunit beta yes no 0 1 0 2 0 1 44.152 44.235 2 0.061066 11835 20230619_1881_Aki_TMTPro18x_K_F2 55.353 36.681 9872.9 9977.5 9676.8 13632 14161 14291 14450 12086 16211 16349 18537 21007 23907 15072 13638 28842 23391 31003 9141.1 9157.4 9938.6 13463 14352 14353 14598 12626 16515 16435 19147 20931 23715 16496 14674 28826 22338 29396 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26549000 30782 1434 28916 57791 46679 46679 921 1 9606 Homo sapiens -0.06853351392783225 YDPPLEDGAMPSAR Unmodified 1517.682 0.68204326 1434 B2R7T8;A0A384MR50;P47756;B1AK88;B4DWA6;B1AK87;P47756-1;B1AK85;A0A6I8PRV6 CAPZB F-actin-capping protein subunit beta yes no 0 0 0 2 0 1 49.17 49.235 3 0.00097025 14091 20230619_1881_Aki_TMTPro18x_K_F2 81.448 64.08 88334 80651 95129 98433 105630 115920 100310 113880 109490 66773 72671 62574 69391 61054 91115 75867 71191 65649 81791 73959 96242 98188 108720 115840 101770 115180 109430 69943 76143 63772 71970 63792 91085 75488 68270 62482 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90581000 30783 1434 28916 57792 46680 46680 1 9606 Homo sapiens -0.056090475301743936 YDPTIEDSYR Unmodified 1257.5513 0.55134667 655;2153 P61224;P61224-3;A0A024RB87;F5H7Y6;E7ESV4;F5GX62;A6NIZ1;P61224-2;Q9BXV4;F5H004;Q5U0C3;F5H6R7;F5GYB5;F5H500;F5H4H0;F5H0B7;F5H491;F5GWU8;F5H077;F5GYH7;A8KAH9;P62834 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1b-like protein;Ras-related protein Rap-1A no no 0 0 0 2 0.816 1 1 1 45.995 46.047 2 1.3605E-06 12577 20230619_1881_Aki_TMTPro18x_K_F2 174.41 125.85 183010 141420 175970 188050 173970 203140 210120 211550 220780 247590 249310 267420 295070 232480 236350 277120 280520 295010 169110 129880 179420 186270 181910 204410 210140 216490 225630 248810 256550 269340 296790 243430 244030 278650 268070 279960 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 758770000 30784 655;2153 28917 57793;57794;57795 46681;46682;46683 46682 3 9606 Homo sapiens -0.06712695186706696 YDPTIEDSYRK Unmodified 1385.6463 0.64630969 655;2153 P61224;P61224-3;A0A024RB87;F5H7Y6;E7ESV4;F5GX62;P61224-2;Q9BXV4;F5H004;Q5U0C3;F5H6R7;F5GYB5;F5H500;F5H4H0;F5H0B7;F5H491;F5GWU8;F5H077;F5GYH7;A8KAH9;P62834 RAP1B;RAP1A Ras-related protein Rap-1b;Ras-related protein Rap-1A no no 0 0 1 4.5 1.12 1 1 1 1 44.461 44.532 3 1.2448E-06 11416 20230619_1885_Aki_TMTPro18x_K_F5 138.71 127.45 825760 662940 793600 762980 920660 950050 933490 923120 1015200 1050600 1112500 1144700 1283500 1033200 1084400 1366200 1231700 1248200 763220 607870 810520 765100 946110 946200 943130 948150 1034000 1057800 1144500 1154600 1294800 1087100 1115900 1360100 1177100 1186700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1722099999.9999998 30785 655;2153 28918 57796;57797;57798;57799 46684;46685 46685 2 9606 Homo sapiens -0.031087617155208136 YDQNYDIR Unmodified 1085.4778 0.47778779 1129;1341 O00203;O00203-3;A0A0S2Z5J4;A8K586;A0A8Q3WKJ9;A0A8Q3WL34;A0A8Q3SIS1;A0A8Q3SHS3;A0A8Q3WKK0;A0A8Q3SHW6;A0A8Q3SHR2;A0A8Q3SI03;A0A8Q3WKN2;A0A8Q3SIM7;A0A8Q3WKF8;A0A8Q3SHU2;A0A0S2Z4Z4;A0A8Q3WKI5;Q3MNE1;A0A8Q3SHP3;B4E0B2;A0A590UJ60;A0A5F9UJV3;A0A2R8Y2A8;A0A590UKC4;Q68CN5;Q13367;Q13367-4;A0A590UJU7;A0A590UJU0;A0A590UK04;Q13367-3;B3KUS4;A0A590UJE5 AP3B1;DKFZp686D17136;AP3B2 AP-3 complex subunit beta-1;AP-3 complex subunit beta;AP-3 complex subunit beta-2 no no 0 0 0 2.5 0.5 1 1 41.218 41.286 2 0.0015284 10151 20230619_1882_Aki_TMTPro18x_K_F3 141.2 90.23 201960 145150 196200 205340 186410 209110 221560 197060 240870 242170 233050 249100 262920 204500 187970 295460 290780 257330 186560 133440 199710 202420 195370 210850 221930 203470 244070 242540 240810 251080 263820 217250 198720 292980 276990 244940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145510000 30786 1129;1341 28919 57800;57801 46686 46686 1 9606 Homo sapiens -0.06153198838546814 YDSDRYR Unmodified 973.42536 0.42535829 2578 P23588;E7EX17;B4DRM3;P23588-2;F8VX11 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 1 3 0.816 1 1 1 29.428 29.51 3 0.025185 5405 20230619_1882_Aki_TMTPro18x_K_F3 79.116 29.758 117090 61861 121400 127730 184650 162770 138840 170400 147900 84910 115390 98314 90827 84302 122360 45411 125300 77800 108060 57256 123890 123940 185220 162060 142990 171160 148670 90855 118800 98751 95039 85378 123570 48352 119530 73726 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147030000 30787 2578 28920 57802;57803;57804 46687;46688 46687 2 9606 Homo sapiens -0.062417371814717626 YDSIPVSTSLLGDTSDTTSTGLAQR Unmodified 2584.2504 0.2504202 4039 Q5JS54;Q5JS54-2;D6RB92;Q5JS54-3 PSMG4 Proteasome assembly chaperone 4 yes no 0 0 0 5 0 1 61.507 61.555 3 8.7775E-06 18576 20230619_1885_Aki_TMTPro18x_K_F5 91.733 80.288 67199 56193 67457 62219 58507 59203 63794 61620 74275 74664 70156 60820 76356 66040 72183 83090 71451 72394 62147 51498 68323 62346 61589 60194 64367 63140 74944 74353 72390 62601 77540 68847 73496 82598 68378 68870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136680000 30788 4039 28921 57805 46689 46689 1 9606 Homo sapiens 0.021665011606273765 YDSLLEQGLVEAALVSK Unmodified 1833.9724 0.97239485 3369 O96028;A0A7I2YQS5;Q05CW4;A0A7P0P278;O96028-5;O96028-3;D6RIS1;D6R9V2;O96028-7;O96028-6 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 0 0 0 7 0 1 65.637 65.662 3 0.00026702 20389 20230619_1887_Aki_TMTPro18x_K_F7 80.603 64.712 14657 15402 15876 15797 15988 14211 14199 15365 19159 16524 17510 16705 21092 15853 15800 15456 18319 21583 13586 14095 16020 15913 16529 14537 14584 15649 19171 16649 18187 16920 21147 16382 16296 15882 17526 20422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231620000 30789 3369 28922 57806 46690 46690 1 9606 Homo sapiens 0.08876754946845722 YDSQVAEENR Unmodified 1209.5262 0.52619455 2228 B4DIQ0;B2R623;O60942-3;O60942-4;O60942-2;O60942 RNGTT mRNA-capping enzyme;Polynucleotide 5'-triphosphatase;mRNA guanylyltransferase yes no 0 0 0 1 0 1 34.868 34.868 2 0.011476 7943 20230619_1880_Aki_TMTPro18x_K_F1 75.294 57.968 7483.5 5072 9595.3 11681 10607 14430 11960 14069 12354 11510 13466 19403 13739 15650 12495 8155.7 19093 18972 6928.5 4697.6 9604.8 11273 10987 14352 11999 14326 12604 12006 13817 19176 13988 15864 13066 8938.7 18203 17905 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15542000 30790 2228 28923 57807 46691 46691 1 9606 Homo sapiens -0.07018749989288153 YDSYESCDSR Unmodified 1280.4615 0.46154538 1708 A0A7P0TAE3;Q9ULX6;A0A7P0TAJ5;A0A140VKH3;B3KMD4;A0A7P0T847;A0A7P0TBP0;V9GZ50;A0A7P0T9N5;A0A7P0TAD3;M0R1Y5;M0R010;M0QYT7 AKAP8L A-kinase anchor protein 8-like yes no 0 0 0 1.5 0.5 1 1 36.437 36.466 2 1.2327E-26 8557 20230619_1880_Aki_TMTPro18x_K_F1 285.32 285.32 44757 32308 48421 62580 65904 72962 58052 66942 69054 67065 86095 87775 91258 78083 73680 50399 107170 96751 41383 29826 49232 60766 66866 72797 59361 68793 70397 68405 87747 87769 92159 79465 76935 53770 102150 91441 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73885000 30791 1708 28924 57808;57809 46692;46693 46692 2 9606 Homo sapiens -0.16746692857600465 YDTALNLLK Unmodified 1049.5757 0.57571092 962 A0A0A0MTB8;Q8NI36 WDR36 WD repeat-containing protein 36 yes no 0 0 0 1 0 1 60.991 60.991 2 1.1349E-05 18867 20230619_1880_Aki_TMTPro18x_K_F1 149.82 95.267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30792 962 28925 57810 46694 46694 1 9606 Homo sapiens 0.05290609757457787 YDTLAQMLTLGNIR Unmodified 1607.8341 0.83412723 4668 Q9UJA5;Q9UJA5-4;Q9UJA5-2;Q9UJA5-3 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes no 0 0 0 4 0 1 64.788 64.798 3 0.0018324 20343 20230619_1883_Aki_TMTPro18x_K_F4 72.417 55.785 11899 9291.5 11808 13168 11024 12032 11512 13359 14502 13217 13968 13426 14293 13481 12113 14324 15264 16954 10999 8539 11998 12963 11530 12281 11680 13550 14581 13373 14364 13626 14485 13948 12542 14521 14586 16069 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10937000 30793 4668 28926 57811 46695 46695 1 9606 Homo sapiens 0.054523532173789135 YDVGGGER Unmodified 851.37735 0.37734547 1318 Q06124-1;Q06124;A0A8I5KW48;A0A3G1LBG2;A0A1W2PPU4;A0A8I5QJ58;Q06124-3;A0A8I5KRZ3;A0A8I5QL30;A0A8I5KVS6;B3GUD5;H0YF12;B3GUD3 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 0 0 0 2 0 1 34.02 34.077 2 0.012388 7317 20230619_1881_Aki_TMTPro18x_K_F2 95.815 74.515 24563 14257 31230 31450 33253 40823 29584 36996 33475 26764 49148 62548 37224 42367 41501 19702 54613 52794 22723 13204 31204 30438 34301 40431 30208 37783 34440 28677 49262 61102 38648 43140 42723 22095 52114 49800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24177000 30794 1318 28927 57812 46696 46696 1 9606 Homo sapiens -0.05428811101512565 YDVQHLQTALR Unmodified 1342.6993 0.69934831 1316 A0A1W2PRP7;A0A1W2PQ77;I3NI02;A0A1W2PR23;A0A1W2PPG5;O14653-2;O14653;A0A1W2PPP5;A0A1W2PR02;A0A1W2PPW8;I3L4Z6;A0A1W2PPG1;A0A1W2PRC2;A0A1W2PQM3;A0A1W2PS81;E7EQ34;I3L0K1;A0A1W2PQP2;O14653-3;A0A1X7SBU8;A0A1W2PRV0;A0A1W2PS12;A0A1W2PRL0;A0A1W2PPJ0;A0A1W2PNV3;A0A1W2PQE0;I3L1K7;A0A1W2PQ06;A0A1W2PQ38;A0A1W2PRE6;A0A1W2PRD0 GOSR2 Golgi SNAP receptor complex member 2 yes no 0 0 0 7.5 0.5 1 1 45.896 45.959 3 2.7487E-09 11844 20230619_1888_Aki_TMTPro18x_K_F8 152.55 111.36 47136 47691 53143 62915 53900 57699 63529 65810 80098 57144 60507 58379 61187 55740 56834 61216 60097 60074 43696 43754 53561 62210 56173 58923 63998 66448 79800 58293 63016 59144 62254 57856 58073 61360 57468 57070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228500000 30795 1316 28928 57813;57814 46697 46697 1 9606 Homo sapiens 0.04170660857812436 YDWDLLAAR Unmodified 1121.5506 0.55055881 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2;K7EP67;K7EJ74 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 6 0 1 61.131 61.186 2 8.8142E-06 18608 20230619_1886_Aki_TMTPro18x_K_F6 176.09 137.06 237190 222790 242920 249680 231900 285410 260950 260920 283360 294920 282160 294770 325000 259660 306190 321190 290460 303970 219570 204120 246200 250480 242740 285330 262200 269150 287530 296210 291570 298040 329290 272320 310900 320790 278150 288850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 302960000 30796 2436 28929 57815 46698 46698 1 9606 Homo sapiens -0.005354450451250159 YDYEEVEAEGANK Unmodified 1515.6365 0.63653286 1521 A0A3B3ITK7;P36871;B4DFP1;B7Z6C2;P36871-3;P36871-2;B4DDQ8 PGM1 Phosphoglucomutase-1 yes no 0 0 0 1.5 0.5 1 1 49.2 49.2 3 1.8719E-15 14008 20230619_1880_Aki_TMTPro18x_K_F1 194.39 164.71 64950 46028 65309 72628 62652 83465 64413 67250 94948 93798 92557 122650 123540 99082 83699 146330 133060 139570 60010 42372 66328 71245 65507 83139 65810 70547 94958 94272 96581 122380 123230 105470 88884 145700 126880 132610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66734000 30797 1521 28930 57816;57817 46699;46700 46699 2 9606 Homo sapiens -0.10065994511569443 YDYNSGEELESYK Unmodified 1595.6627 0.66274761 4727 Q9Y3F4;Q9Y3F4-2;B0AZV0;H0YH33 STRAP Serine-threonine kinase receptor-associated protein yes no 0 0 0 2.2 1.17 2 1 1 1 52.292 52.324 3 1.9108E-06 15047 20230619_1883_Aki_TMTPro18x_K_F4 138.42 123.73 370250 300320 365820 392500 314680 337080 379740 389510 375520 467900 439790 403730 511630 397890 385270 553050 468040 486110 342310 275710 371350 388130 332480 346300 379230 396420 385890 466490 451000 412900 513660 418990 399500 548990 447140 462350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 713650000 30798 4727 28931 57818;57819;57820;57821;57822 46701;46702;46703 46703 3 9606 Homo sapiens -0.11125725340093595 YEAAGTLVTLSSAPTAIK Unmodified 1791.9618 0.96183016 3646 P53618;E9PP73 COPB1 Coatomer subunit beta yes no 0 0 0 2 0 1 61.277 61.287 3 1.358E-13 19136 20230619_1881_Aki_TMTPro18x_K_F2 146.3 122.82 225420 163960 203920 206090 222220 251510 228260 220830 262470 239860 231870 265540 273120 221180 233240 319970 290810 317590 208130 150530 209220 205260 229670 250160 230850 228250 264300 242230 241370 266940 275560 234870 241550 319520 277870 301580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1582199999.9999998 30799 3646 28932 57823 46704;46705 46704 2 9606 Homo sapiens 0.09752772292426926 YEAANWK Unmodified 880.40792 0.40791731 1226 G3V295;A0A140VK44;G3V5Z7;P60900;P60900-2;G3V3I1;P60900-3 PSMA6 Proteasome subunit alpha type;Proteasome subunit alpha type-6 yes no 0 0 0 6.5 0.5 1 1 47.176 47.261 2 0.012826 12301 20230619_1887_Aki_TMTPro18x_K_F7 114.78 66.279 155820 126540 171200 152350 183320 255500 185660 180830 648900 156150 148880 146530 170170 134650 175410 133780 169110 135340 144190 116070 172770 153080 190930 248650 200790 189160 613180 160150 177010 148750 173430 139300 177680 134700 161630 128650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98731000 30800 1226 28933 57824;57825 46706 46706 1 9606 Homo sapiens -0.03707032716476988 YEDAVQFIR Unmodified 1139.5611 0.56112349 3826;519 Q12974-3;Q12974;A0A024R8J2;B5BU78;Q93096 PTP4A2;PTP4A1 Protein tyrosine phosphatase type IVA 2;Protein tyrosine phosphatase type IVA 1 no no 0 0 0 4.5 0.5 1 1 54.567 54.608 2 0.00071883 15664 20230619_1885_Aki_TMTPro18x_K_F5 150.35 85.313 114680 89197 107180 119840 94872 120490 108740 113720 125740 147370 150410 154950 156310 136390 144280 164310 156960 180170 105950 81925 109400 118480 100050 121580 109440 117550 128220 147330 153450 156320 158790 142790 147750 165490 150220 170870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 166840000 30801 3826;519 28934 57826;57827 46707 46707 1 9606 Homo sapiens -0.0030746239067411807 YEDFKEEGSENAVK Unmodified 1643.7315 0.73149588 3129 J3KQ32;Q9NTK5;Q53SQ6;Q9NTK5-2 OLA1;PTD004 Obg-like ATPase 1 yes no 0 0 1 3.33 0.471 2 1 47.245 47.306 3 3.0552E-08 12722 20230619_1883_Aki_TMTPro18x_K_F4 145.52 118.18 187390 151430 174030 191700 198500 196310 200290 189860 180430 242100 249640 221950 255220 186860 248500 215340 208670 183060 173160 138980 178340 190340 204060 198090 201310 195840 187990 241110 252980 225040 259650 195520 250420 214290 199860 174310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 394090000 30802 3129 28935 57828;57829;57830 46708;46709 46709 2 9606 Homo sapiens -0.06462061040360823 YEDFSNLGTTHLLR Unmodified 1664.8158 0.81583463 3492 P22695;H3BRG4;H3BSJ9;H3BP04;H3BUE4;H3BUI9;A0A087WVZ4 UQCRC2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 6.5 0.5 1 1 53.969 54.041 3 1.0774E-11 15321 20230619_1887_Aki_TMTPro18x_K_F7 175.74 158.16 39008 32898 41282 40483 30695 64675 43325 39057 62916 41307 36144 47972 62312 61288 48564 48120 51576 42678 36094 30179 41624 40556 33335 62889 43534 41739 61877 41936 39566 48806 62181 62032 49780 48292 49257 40626 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1805099999.9999998 30803 3492 28936 57831;57832 46710 46710 1 9606 Homo sapiens 0.010019345670571056 YEDLAPCITLK Unmodified 1321.6588 0.65878863 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 7 0 1 60.398 60.441 3 0.0011485 17958 20230619_1887_Aki_TMTPro18x_K_F7 89.403 64.708 83200 66907 79095 83145 74833 81931 85135 86720 87997 95944 82942 87643 112410 86930 93521 123710 105520 103950 76893 61394 80647 82633 78335 83058 85359 88507 89391 96199 86666 89374 112850 91660 96258 122520 100830 98944 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69345000 30804 1552 28937 57833 46711 46711 1 9606 Homo sapiens 0.010825584231497487 YEDRYDR Unmodified 1015.4359 0.43592298 2578 P23588;E7EX17;B4DRM3;P23588-2;B4DEP6;Q7Z5Y0;F8VX11;F8VP89 EIF4B Eukaryotic translation initiation factor 4B yes no 0 0 1 1.5 0.5 1 1 30.036 30.071 3 0.0028585 5730 20230619_1881_Aki_TMTPro18x_K_F2 125.01 111.55 52681 19715 43672 48196 58023 58333 53751 54570 64593 58704 81536 82413 73607 71230 65646 38265 87664 78008 48478 18347 45348 46405 59012 58089 54789 56123 65814 59842 82502 82127 75059 72110 67944 41314 83596 73706 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64533000 30805 2578 28938 57834;57835 46712 46712 1 9606 Homo sapiens -0.07117754527041598 YEDYNVIVTTYNCAISSSDDR Unmodified 2484.0751 0.075098376 4516 Q9H4L7;Q9H4L7-2;Q9H4L7-3 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 0 0 0 5 0 1 62.612 62.659 3 6.9116E-06 19130 20230619_1885_Aki_TMTPro18x_K_F5 95.195 89.742 15789 16226 21697 22164 17612 24682 24368 19002 26493 21602 18609 17289 24481 15744 21859 23924 22653 22021 14668 14892 21501 21919 18821 24620 24230 19893 26550 21581 19716 17706 24645 16751 22328 23795 21662 20938 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22302000 30806 4516 28939 57836 46713 46713 1 9606 Homo sapiens -0.10757616905266332 YEEEEEQSR Unmodified 1197.4786 0.47857565 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 1 0 1 32.159 32.159 2 3.9365E-16 6841 20230619_1880_Aki_TMTPro18x_K_F1 196.99 188.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30807 4746 28940 57837 46714 46714 1 9606 Homo sapiens -0.1122644898011913 YEEENFYLEPYLK Unmodified 1735.7981 0.79811888 2203;3454 B2R4A2;P14927 UQCRB Cytochrome b-c1 complex subunit 7 no no 0 0 0 2.5 1.12 1 1 1 1 62.586 62.597 3 0.00022566 19454 20230619_1883_Aki_TMTPro18x_K_F4 95.631 83.076 34858 26443 33025 35840 32208 40397 38914 35571 41377 40210 40704 39865 48355 38690 36514 44810 45646 55544 32203 24292 33714 35471 33738 40375 38919 36809 41995 40391 42115 40456 48536 40308 37890 45502 43654 52606 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 168240000 30808 2203;3454 28941 57838;57839;57840;57841 46715 46715 1 9606 Homo sapiens -0.04034825478493076 YEEEVLSREDAEGR Unmodified 1680.7591 0.75910761 2388 B3KQI5;P07196;I6L9F6 NEFL Neurofilament light polypeptide no no 0 0 1 1 0 1 42.507 42.507 3 0.00073803 11226 20230619_1880_Aki_TMTPro18x_K_F1 88.706 75.306 63365 73859 68432 60879 47913 52143 40874 45465 54611 56528 72102 74912 59464 62530 65333 71932 78275 59629 58786 67462 68708 62529 51216 53330 42149 47238 55541 57096 72624 74803 61460 65308 67077 71444 74638 56834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 107200000 30809 2388 28942 57842 46716 46716 1 9606 Homo sapiens -0.05404157780162677 YEEIDNAPEER Unmodified 1363.5892 0.58918874 1417 P49411;A0A384ME17 TUFM Elongation factor Tu, mitochondrial yes no 0 0 0 1 0 1 41.215 41.215 2 0.00014742 10643 20230619_1880_Aki_TMTPro18x_K_F1 133.81 122.78 21187 15354 22255 20874 23420 24985 33970 20462 28398 22201 24138 23168 24528 18033 35616 22098 24449 22624 19585 14108 22539 20678 24481 24848 33423 21304 29048 22391 25012 23303 25519 19000 35329 22216 23488 21490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60271000 30810 1417 28943 57843 46717 46717 1 9606 Homo sapiens -0.07806228991898934 YEELFPAFSDSR Unmodified 1459.662 0.66195975 109 A0A024R0R9;P54920;M0R0Y2;M0R2M1;M0R213;M0R0I4 NAPA Alpha-soluble NSF attachment protein yes no 0 0 0 4 0.816 1 1 1 62.264 62.291 2 8.082700000000001E-25 18955 20230619_1885_Aki_TMTPro18x_K_F5 266.17 235.56 205000 176590 196450 223870 177250 223850 233500 225750 259070 271630 247690 242980 277910 220530 236350 283830 271970 294940 189550 162030 200210 222180 187380 226340 232950 231750 262170 271160 255940 247220 280630 231710 243300 284670 260040 279930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 311250000 30811 109 28944 57844;57845;57846 46718;46719 46719 2 9606 Homo sapiens -0.04948475198489177 YEELQITAGR Unmodified 1178.5932 0.5931519 2778 H6VRG3;H6VRG0;H6VRF8;CON__P04264;H6VRG1;P04264;H6VRG2;H6VRF9 KRT1 Keratin, type II cytoskeletal 1 no no 0 0 0 3.5 0.5 1 1 48.237 48.297 2 9.3908E-06 13191 20230619_1883_Aki_TMTPro18x_K_F4 165.98 143.48 + 74574 79417 107680 163550 2317500 161640 548430 119970 278320 59073 83936 74284 85489 579560 127410 69857 117160 102920 69340 73289 136940 157930 2165000 169310 645100 125200 293270 64735 95696 91857 92733 551950 127920 80861 112100 97458 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 254670000 30812 2778 28945 57847;57848 46720;46721 46721 2 9606 Homo sapiens 0.010999052924717034 YEELQVTVGR Unmodified 1192.6088 0.60880197 2787 CON__P35908v2;CON__P35908;P35908 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 0 0 0 4 0 1 49.215 49.253 2 0.011627 13633 20230619_1883_Aki_TMTPro18x_K_F4 74.944 60.737 + 53522 51730 62351 94390 586230 74506 59141 79886 111290 76404 83340 80067 80191 275710 91252 72098 86901 77771 49614 47662 69765 91440 548940 78539 91773 81143 110010 77871 86687 87705 83882 266240 92244 76295 83125 73841 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67119000 30813 2787 28946 57849 46722 46722 1 9606 Homo sapiens 0.02020191809538119 YEEVEYYYQR Unmodified 1440.6198 0.61976058 3808 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;B4DS14;F8W6L3;B4DGB3;Q7Z5D5 KLC1;KNS2 Kinesin light chain 1 yes no 0 0 0 3 0 1 50.823 50.894 2 0.00026447 14526 20230619_1882_Aki_TMTPro18x_K_F3 158.37 143.69 123250 86707 105840 128920 94240 115840 121180 111930 124520 143610 136990 148950 162390 137410 135760 171270 163870 168850 113730 79764 108950 126480 99647 117970 120740 115540 127280 143580 141160 150570 163680 143920 140260 171330 156550 160380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79070000 30814 3808 28947 57850 46723 46723 1 9606 Homo sapiens -0.08292450606859347 YEEVSVSGFEEFHR Unmodified 1713.7635 0.76346471 1212 A0A140VJY7;Q9BRA2;I3L0K2;I3L3M7;I3L2R6 TXNDC17 Thioredoxin domain-containing protein 17 yes no 0 0 0 3 0.816 1 1 1 52.445 52.485 3 0.01408 15166 20230619_1883_Aki_TMTPro18x_K_F4 62.377 54.597 56610 49401 51781 56754 57169 61365 62086 60048 77774 61930 68703 65192 67442 56306 70042 64200 66402 70283 52330 45282 53115 56783 59107 61689 62785 61496 77925 62621 70848 65747 68984 58807 70946 64751 63595 66677 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141350000 30815 1212 28948 57851;57852;57853 46724 46724 1 9606 Homo sapiens -0.06486648566578879 YEFGIFNQK Unmodified 1144.5553 0.55530983 3432;1055 B4DRW6;B2RB32;A0A0M4FEM1;P11217;B4DRQ4;Q59GM9;P11216;B4DSD8 PYGM;PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, muscle form;Glycogen phosphorylase, brain form no no 0 0 0 1.5 0.5 1 1 59.666 59.673 3 0.023652 18325 20230619_1880_Aki_TMTPro18x_K_F1 61.691 39.005 42334 37786 45809 43149 38565 49119 45642 46125 53041 46925 49466 43551 50767 44386 55630 54908 47236 43829 39194 34631 46128 43233 40870 49139 45857 47345 53454 47300 50956 44438 52002 46294 56015 54400 45253 41759 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237890000 30816 1055;3432 28949 57854;57855 46725 46725 1 9606 Homo sapiens -0.011185609023414145 YEGFFSLWK Unmodified 1175.5651 0.56514624 3104 I3L1P8;Q6IBH0;Q02978;Q02978-2 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 3.5 0.5 1 1 64.558 64.579 3 0.060992 20380 20230619_1882_Aki_TMTPro18x_K_F3 44.753 8.0596 31835 24799 30580 34337 26433 33824 34749 34233 36453 32398 30680 35134 34708 31483 31477 33513 36171 35847 29418 22785 31137 33877 28042 34231 34609 34906 36805 32929 31961 35403 35163 32697 32333 33774 34560 34024 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28365000 30817 3104 28950 57856;57857 46726 46726 1 9606 Homo sapiens -0.015613728969583462 YEGILYTIDTDNSTVALAK Unmodified 2086.047 0.047016357 4460 Q9BX40;Q5TBQ0;Q9BX40-2;Q5TBQ1;A0A0C4DFV2 LSM14B Protein LSM14 homolog B yes no 0 0 0 6.5 0.5 1 1 63.226 63.266 3 0.00012723 19321 20230619_1887_Aki_TMTPro18x_K_F7 76.761 63.305 114680 99699 114840 139170 113990 116480 121630 115630 130300 150480 171800 154350 171390 157140 154490 179050 166740 174110 106090 91571 116770 136940 118590 119500 122520 119200 133970 150320 174170 156720 174180 163100 158210 179240 159470 165390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 244580000 30818 4460 28951 57858;57859 46727 46727 1 9606 Homo sapiens 0.04743472967584239 YEGNVTEETR Unmodified 1196.5309 0.53094558 2975 F5H3Y4;Q8IY37 DHX37 Probable ATP-dependent RNA helicase DHX37 yes no 0 0 0 1 0 1 35.979 35.979 2 7.6542E-07 8338 20230619_1880_Aki_TMTPro18x_K_F1 183.13 150.29 48829 30103 49192 53430 69169 70669 60444 58924 72440 60020 75888 70586 76457 67335 62759 48456 88101 77872 45084 27775 50261 52216 70000 69858 61814 61038 73215 60966 77669 71046 77396 68603 65366 50701 83979 73689 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78453000 30819 2975 28952 57860 46728 46728 1 9606 Homo sapiens -0.05945865846547349 YEHDDIVSTVSVLSSGTQAVSGSK Unmodified 2465.1922 0.19217704 93 A0A024R0H7;Q9BQA1;H0Y711 WDR77 Methylosome protein 50 yes no 0 0 0 7 0 1 58.719 58.768 3 1.1864E-27 17315 20230619_1887_Aki_TMTPro18x_K_F7 193.63 185.42 22428 6627.9 17869 19337 14856 18828 21014 21099 21641 28517 24329 29154 30055 22660 20694 32664 26875 35014 20621 6204.7 18499 18455 15863 19098 20856 21595 22158 28421 25110 29331 30032 24136 21619 32753 25710 33202 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54262000 30820 93 28953 57861 46729 46729 1 9606 Homo sapiens 0.01818864305914758 YEIDLDTSDHAHLEHITR Unmodified 2164.0185 0.018510196 116 P08237-3;P08237;A0A2R8Y891;A0A024R0Y5;A0A0S2Z4A1;P08237-2;A0A0S2Z4I1;Q96I60;F8VZI0;B4E162;Q7KYX9;A0A0S2Z4A8;Q7Z683 PFKM;DKFZp779O048 ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase yes no 0 0 0 3.5 0.5 1 1 44.339 44.397 5 1.0463E-13 11579 20230619_1882_Aki_TMTPro18x_K_F3 157.42 148.62 41146 34678 46905 42032 45772 54175 52185 50489 52021 44706 52434 55164 55613 49522 59859 45714 60179 64053 38097 31807 47131 42019 47804 53763 52251 51680 52994 45822 53962 55324 56872 51083 60731 47074 57602 60629 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171800000 30821 116 28954 57862;57863 46730 46730 1 9606 Homo sapiens -0.016938318889970105 YEIEETETVTK Unmodified 1340.6347 0.63474195 3798 Q05682-5;E9PGZ1;E7EX44;A0A140VKA0;Q05682-3;Q05682-4;Q9NYG1;Q05682;Q05682-6;Q05682-2;B7Z6G4;B4DPW5;C9J813;Q6PJM5;Q6P707 CALD1 Caldesmon yes no 0 0 0 2 0 1 49.129 49.194 2 3.343E-18 14062 20230619_1881_Aki_TMTPro18x_K_F2 232.84 185.64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30822 3798 28955 57864 46731 46731 1 9606 Homo sapiens -0.021950035295276393 YEIEHCLANK Unmodified 1275.5918 0.59177169 2768 CON__ENSEMBL:ENSBTAP00000024146 yes yes 0 0 0 5 0 1 45.742 45.819 3 0.00021419 11988 20230619_1885_Aki_TMTPro18x_K_F5 117.7 103.01 + 33554 37300 38202 30360 97947 110040 70385 60066 97034 43532 62660 61663 45341 47094 54429 43994 59444 65749 31132 34071 39291 32270 96320 104080 73275 64327 95790 45594 65149 61291 47338 48877 55409 45512 56871 62195 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 101750000 30823 2768 28956 57865 46732 46732 1 9606 Homo sapiens -0.03500052067965953 YEILTPNAIPK Unmodified 1257.6969 0.69688869 3549;4165 P35580;P35580-3;A0A8I5KZ38;P35580-5;P35580-2;P35580-4;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43;B3KWH4 MYH10;MYH14 Myosin-10;Myosin-14 no no 0 0 0 8 0 1 58.022 58.069 3 0.029186 17013 20230619_1888_Aki_TMTPro18x_K_F8 54.471 20.605 42073 36594 43105 44660 40884 45720 43367 42249 59165 39623 34720 39083 39108 33523 44393 42500 36726 40904 38927 33563 43676 44457 42738 46075 44062 43346 58362 40213 37011 39503 40032 35236 44617 42484 35242 38852 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15075000 30824 3549;4165 28957 57866 46733 46733 1 9606 Homo sapiens 0.07834812400119517 YEILTPNSIPK Unmodified 1273.6918 0.69180331 148 P35579;A0A8I5KWT8;A0A024R1N1;A0A0U4BW16;P35579-2;Q86XU5;B4E3S1 MYH9 Myosin-9 yes no 0 0 0 4.5 3.5 1 1 57.167 57.193 3 0.025507 17348 20230619_1880_Aki_TMTPro18x_K_F1 57.019 27.691 63610 44666 60549 66961 58321 76773 72020 66877 77609 77005 71131 79162 93923 68250 76516 102280 87020 103370 58743 41094 61790 65880 61223 76603 71984 69294 78532 77356 74337 79919 94243 72622 78841 102200 83272 98111 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 97733000 30825 148 28958 57867;57868 46734;46735 46734 2 9606 Homo sapiens 0.06590508537487949 YEINSLIR Unmodified 1006.5447 0.54474515 628 E9PF17;A0A024RAP3;A0A024RAL1;A0A024RAQ9;Q59FG9;P13611-4;P13611-3;P13611-2;P13611-5;P13611;B7Z3R6;Q6MZK8 VCAN;CSPG2;DKFZp686K06110 Versican core protein yes no 0 0 0 8 0 1 52.429 52.506 2 0.011833 14611 20230619_1888_Aki_TMTPro18x_K_F8 96.311 43.908 212760 189930 189110 155320 207680 245940 201230 201300 232990 303450 326940 410740 317370 293800 369900 301730 309150 353680 196660 173610 194150 161140 214310 240950 204380 211390 239600 304300 331300 407630 326730 307200 371500 306270 296690 335210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77874000 30826 628 28959 57869 46736 46736 1 9606 Homo sapiens 0.0417345644324314 YEISSVPTFLFFK Unmodified 1576.8177 0.81773211 1180 A0A140VJK1;O76003 GLRX3 Glutaredoxin-3 yes no 0 0 0 3.67 0.471 1 2 65.511 65.53 2;3 1.0833E-06 20750 20230619_1882_Aki_TMTPro18x_K_F3 141.73 113.09 24978 23325 23957 27095 25971 32063 29626 26909 33336 28649 29041 23397 27145 27962 29373 30923 29159 29823 23109 21378 24477 27115 26945 31923 29763 27898 33566 28726 29886 24174 27905 28833 29827 30964 27906 28335 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 172480000 30827 1180 28960 57870;57871;57872 46737;46738 46737 2 9606 Homo sapiens 0.052395953229051884 YEITEQR Unmodified 937.45051 0.45051041 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;B4DRX3 RPL6 60S ribosomal protein L6 yes no 0 0 0 3 0.816 1 1 1 38.155 38.208 2 0.0051349 8933 20230619_1881_Aki_TMTPro18x_K_F2 143.23 98.697 204370 132060 166970 214170 221570 256430 228070 234320 370880 259450 288540 367590 387660 370320 219450 434000 530560 562120 188440 121660 173870 209890 226470 255430 233830 241600 366170 264520 304510 368400 385230 385240 244440 441530 504850 532430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 455860000 30828 680 28961 57873;57874;57875 46739;46740 46739 2 9606 Homo sapiens -0.020716823788916372 YEITFTLPPVHR Unmodified 1471.7823 0.78234966 4486 Q9GZN8-2;Q9GZN8;H7BYU9 C20orf27 UPF0687 protein C20orf27 yes no 0 0 0 2 0 1 56.522 56.54 3 2.3516E-07 17200 20230619_1881_Aki_TMTPro18x_K_F2 128.88 113.12 16882 16701 19770 23577 19715 20513 20606 16621 21011 18036 18948 15979 20434 15463 20951 17079 16482 14388 15653 15335 19863 23190 20484 20887 20734 17313 21296 18102 19590 16306 20812 16060 21026 17003 15798 13702 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25476000 30829 4486 28962 57876 46741 46741 1 9606 Homo sapiens 0.06532977585789013 YEKPDGSPVFIAFR Unmodified 1624.8249 0.82494275 3867 Q13740-2;F5GXJ9;Q13740;B3KNN9;B4DX43;Q13740-3 ALCAM CD166 antigen yes no 0 0 1 1.5 0.5 1 1 56.643 56.652 3 9.9115E-09 17241 20230619_1881_Aki_TMTPro18x_K_F2 158.65 141.93 143330 114890 132760 152260 219240 257430 258120 256190 277020 195420 131830 145710 223490 138380 154020 259610 171510 180030 132430 105500 137280 152030 222020 252160 258290 259980 275340 199380 146180 150130 221630 149560 159390 254130 163990 171800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 417050000 30830 3867 28963 57877;57878 46742 46742 1 9606 Homo sapiens 0.037523279233482754 YELDYIL Unmodified 927.45895 0.45894983 3309 O75533;Q9NTB4 SF3B1;DKFZp434M052 Splicing factor 3B subunit 1 yes no 0 0 0 3.5 0.5 1 1 65.425 65.448 2 0.046991 20717 20230619_1882_Aki_TMTPro18x_K_F3 94.95 74.668 57332 53289 54623 56719 54854 58265 65079 59260 56994 63399 65096 56519 67637 55646 63099 68881 73590 64389 53038 48802 55732 57050 57185 58856 64780 60598 58877 63627 66475 57707 68727 58141 64849 68742 70246 61238 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 168180000 30831 3309 28964 57879;57880 46743 46743 1 9606 Homo sapiens -0.0076812846227767295 YELGRPAANTK Unmodified 1218.6357 0.63568542 3707 Q5JR94;P62241;Q5JR95 RPS8 40S ribosomal protein S8 yes no 0 0 1 4.5 3.04 1 1 1 1 38.564 38.592 3 3.7968E-05 9430 20230619_1880_Aki_TMTPro18x_K_F1 138 109.79 1083100 885770 919470 1034400 1076000 1196600 1166900 1168500 1272400 1012800 1015800 891020 1286600 967660 926380 1371800 1209800 875530 1000300 812230 950780 1034600 1108200 1197100 1174300 1191400 1279700 1028800 1065000 914330 1287000 1016900 966310 1343100 1152500 838070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3248099999.9999995 30832 3707 28965 57881;57882;57883;57884 46744;46745 46744 2 9606 Homo sapiens 0.03511300420700536 YELISETGGSHDK Unmodified 1434.6627 0.66268803 3823;1133 Q12906-7;F4ZW66;A0A024R7C7;Q12906;Q12906-4;Q12906-6;A8K590;F4ZW64;F4ZW65;Q12906-3;Q12906-5;Q12906-2;B4DFG4;B4DDF3;A0A0S2Z5K8;V9HWK4;Q96SI9-2;Q96SI9 ILF3;HEL162;STRBP Interleukin enhancer-binding factor 3;Spermatid perinuclear RNA-binding protein no no 0 0 0 4 0.816 1 1 1 44.733 44.798 3 1.0502000000000001E-45 11735 20230619_1882_Aki_TMTPro18x_K_F3 255.15 224.66 627560 537620 617320 640920 684880 736450 685640 711250 634800 778230 819520 892080 828950 714490 613110 800450 876810 909630 580380 493000 629070 640130 705670 737000 690110 730070 657690 785890 832820 894040 835670 747470 642840 808570 836610 862690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1113000000 30833 3823;1133 28966 57885;57886;57887 46746;46747 46746 2 9606 Homo sapiens -0.03725680549428034 YELPLVIQALTNIEDK Unmodified 1858.0088 0.0087803574 112 A8K6H9;A0A024R0W3;Q96QD8-2;Q96QD8 SLC38A2 Sodium-coupled neutral amino acid transporter 2 yes no 0 0 0 7.5 0.5 1 1 67.189 67.21 3 0.004542 20795 20230619_1888_Aki_TMTPro18x_K_F8 68.944 56.317 9717 6670.9 6980.7 7147.3 5508.7 5641.9 6231 8144.6 8741.9 10534 12544 10472 12848 11647 8267.3 17403 12721 14685 8955.1 6116.7 7295 7166.7 5866.8 5881.7 6329.5 8205.9 8918.5 10512 12681 10698 12893 12273 8785.5 17214 12142 13969 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18310000 30834 112 28967 57888;57889 46748 46748 1 9606 Homo sapiens 0.11409631843548595 YELQQLEGSSDR Unmodified 1423.6579 0.657937 4309 Q92878-2;Q92878;Q92878-3;A0A1W2PQ90;A0A494C1B7;Q32P42;A8K3I2;E7EN38;A0A494C122;E7ESD9;A0A494BZX5;A0A494C0Y7 RAD50 DNA repair protein RAD50 yes no 0 0 0 2 0 1 48.722 48.787 2 1.8025E-10 13878 20230619_1881_Aki_TMTPro18x_K_F2 193.28 172.95 142700 103290 111200 121900 112010 115240 147120 129670 152980 165150 176770 194180 206450 162210 163820 200270 193250 230830 131620 94775 115670 121530 117210 117420 146450 132500 156530 165840 181630 194700 207650 170490 169170 202220 184880 218780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108750000 30835 4309 28968 57890 46749 46749 1 9606 Homo sapiens -0.03694564692182212 YELTGKFER Unmodified 1141.5768 0.57677356 1062;1064 A0A0S2Z2Z6;P08133-2;P08133;A8K3Q7;E5RJF5;E5RK63;A0A0S2Z301;E5RI05;E5RFF0;E5RIU8;E5RJR0;A0A0S2Z377 ANXA6 Annexin A6;Annexin no no 0 0 1 8 0 1 46.629 46.678 3 0.028035 12147 20230619_1888_Aki_TMTPro18x_K_F8 54.343 27.829 106020 158590 118470 100070 160770 91614 121260 118560 84417 104160 106160 61027 67709 52006 127210 72405 71890 43654 98633 144540 119710 106080 161760 94376 123500 118850 89093 104610 106050 63741 73037 55043 124950 71016 69123 41871 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161110000 30836 1062;1064 28969 57891 46750 46750 1 9606 Homo sapiens 0.011648241263856107 YEMFAQTLQQSR Unmodified 1500.7031 0.70311306 3656 P55072;V9HW80;A0A7P0TAW3;A0A7I2V540;C9JUP7;A0A7P0T8A3;A0A7P0T8Q5;Q96IF9;Q0IIN5;Q9NTC4;A0A7P0TA22 VCP;HEL-S-70;DKFZp434K0126 Transitional endoplasmic reticulum ATPase yes no 0 0 0 2 0 1 56.757 56.773 3 0.00020351 17303 20230619_1881_Aki_TMTPro18x_K_F2 97.463 85.671 28530 22582 23000 29516 25414 41259 25196 23227 43557 27492 25142 28779 29583 26376 26855 34864 28113 32134 26333 20733 23913 29358 26361 40378 25962 25100 42560 27658 26876 29076 29942 27725 27472 34722 26914 30535 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6654500 30837 3656 28970 57892 46751 46751 1 9606 Homo sapiens -0.027210374306605445 YEMYPLGVK Unmodified 1098.542 0.54196796 1448 H7C2W1;C9K0G7;E9PCG9;A0A384MTY4;Q02338;A1E284 BDH1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial yes no 0 0 0 8 0 1 57.013 57.065 2 0.0054963 16593 20230619_1888_Aki_TMTPro18x_K_F8 86.011 58.896 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30838 1448 28971 57893 46752 46752 1 9606 Homo sapiens -0.003361350059549295 YENNVMNIR Oxidation (M) 1167.5343 0.53425682 1092 A0A0S2Z4B5;Q08209;A0A0S2Z4C6;Q08209-2;E7ETC2;Q08209-5;Q9UMM5;Q5F2F8;P16298-4;P16298-2;P16298-3;Q08209-4;P16298;B7Z781;P48454-3;P48454;P48454-2;H0YC26 PPP3CA;PPP3CB;PPP3CC Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform yes no 0 1 0 4.5 0.5 1 1 38.126 38.194 2 0.0084528 8782 20230619_1885_Aki_TMTPro18x_K_F5 83.168 65.772 47076 41081 44471 46871 45239 47737 49659 52773 55531 49852 54730 54911 49002 43791 47649 52758 61167 57685 43528 37653 45416 46891 47039 48336 50012 53481 56184 50685 55943 55143 50161 46007 49249 53134 58369 54750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66897000 30839 1092 28972 57894;57895 46753 46753 667 1 9606 Homo sapiens -0.042808942735291566 YEPAAVSEQGDKK Unmodified 1420.6834 0.68342347 3387 P05023;P05023-4;P05023-2;A0A2H4Y9T5 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 1 4.5 0.5 1 1 41.354 41.418 3 3.2999E-06 10151 20230619_1885_Aki_TMTPro18x_K_F5 134.68 115.95 26611 12086 18895 27712 32547 37550 23475 33354 50969 38109 41330 58846 50914 46737 30733 53376 74445 74564 24479 11218 20091 26782 32578 37089 25046 34464 49963 38921 43355 58339 50784 48965 34139 54637 70807 70596 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 245990000 30840 3387 28973 57896;57897 46754 46754 1 9606 Homo sapiens -0.010090901697822119 YEPPHIK Unmodified 882.45995 0.45995289 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 6.67 0.471 1 2 41.035 41.116 3 0.022377 10040 20230619_1886_Aki_TMTPro18x_K_F6 69.176 37.24 59729 41737 54016 60981 72806 70364 71164 73882 78302 73287 75490 78160 87717 69995 69918 81525 92175 84510 55136 38388 55664 60106 74027 70522 72063 75200 79275 74246 78127 78854 88282 73107 72696 81876 87924 80265 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 154050000 30841 1432 28974 57898;57899;57900 46755;46756 46755 2 9606 Homo sapiens 0.014021306972949787 YEPQLPDHWEK Unmodified 1440.6674 0.66737948 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;A0A7I2V3I5;A0A7I2V2T9;A0A7I2V3J7;A0A7I2V682;A0A7I2V407;A0A7I2V2J0;A0A7I2V5R0;E7EPA6;A0A7I2V2R2 LAMB1 Laminin subunit beta-1 yes no 0 0 0 5.5 0.5 1 1 50.862 50.938 3 0.00063903 14161 20230619_1885_Aki_TMTPro18x_K_F5 87.719 56.492 69626 55768 69873 62496 57143 78214 87358 77625 88580 78990 73533 74993 96677 64517 76901 97664 79859 82398 64375 51123 70761 62812 61267 77853 86336 79382 89562 79649 77176 76002 96879 68713 78825 96690 76398 78415 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 167390000 30842 3015 28975 57901;57902 46757 46757 1 9606 Homo sapiens -0.035327516160123196 YEQAIQCYTEAISLCPTEK Unmodified 2303.045 0.044984222 2627 B4DZ87;O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 0 8 0 1 62.934 62.96 3 0.058028 19051 20230619_1888_Aki_TMTPro18x_K_F8 49.528 39.189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30843 2627 28976 57903 46758 46758 1 9606 Homo sapiens -0.05441647104225922 YEQGFITDPVVLSPK Unmodified 1691.877 0.8770379 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5;B7Z1G4;Q6QE17 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 0 0 7 0 1 61.822 61.861 3 0.01072 18649 20230619_1887_Aki_TMTPro18x_K_F7 64.136 51.156 37989 37810 50767 44502 34576 45516 44814 45101 38959 60727 50238 46311 58459 52957 51417 63488 63931 59087 35273 34650 50234 44432 37469 45932 44462 46512 40584 60063 51355 47907 59100 54962 53162 63350 61014 56186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 223500000 30844 1454 28977 57904 46759 46759 1 9606 Homo sapiens 0.05877446546446663 YEQGTGCWQGPNR Unmodified 1551.6525 0.65247447 444 A0A024R7F1;K7ELL7;B4DJQ5;P14314-2;P14314;A0A0S2Z4D8;A0A0S2Z4W7;A0A0C4DGP4 PRKCSH Glucosidase 2 subunit beta yes no 0 0 0 5.8 0.748 2 2 1 41.302 41.388 2;3 6.0713E-11 10094 20230619_1885_Aki_TMTPro18x_K_F5 177.64 165.02 115550 91485 116010 113830 138700 148540 139340 148280 154240 126690 145040 139790 140150 117310 131510 137520 162790 145270 106830 83953 118140 113600 142250 147550 140930 150860 155830 129610 149000 140610 142800 122830 135630 138300 155340 137960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 834360000 30845 444 28978 57905;57906;57907;57908;57909 46760;46761 46760 2 9606 Homo sapiens -0.1012856675565672 YEREQYADR Unmodified 1228.5473 0.54726434 2142 A8K9U0;Q9BWF3 RBM4 RNA-binding protein 4 no no 0 0 1 2 0 1 29.784 29.853 3 0.00027916 5673 20230619_1881_Aki_TMTPro18x_K_F2 125.48 72.899 53673 51225 53233 49228 84033 57752 51862 63650 62653 64664 64066 48657 63224 49279 53093 60482 74219 52726 49678 46868 54490 50051 83729 58018 54540 64581 63350 64797 65509 50201 64063 51433 55363 60148 70659 50241 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69752000 30846 2142 28979 57910 46762 46762 1 9606 Homo sapiens -0.05786739889776982 YESGPDGGEEGVSGR Unmodified 1494.6223 0.62227978 3808 Q07866-3 KLC1 Kinesin light chain 1 yes yes 0 0 0 1 0 1 36.447 36.447 2 1.3886E-32 8564 20230619_1880_Aki_TMTPro18x_K_F1 243.4 234.39 16792 11484 14315 17093 17153 15285 12846 16155 21717 19583 21138 25362 23292 18290 17438 22761 30107 28307 15492 10566 14797 16769 17474 15619 13488 16534 21601 19783 21826 25230 23430 19348 18561 23092 28671 26834 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22974000 30847 3808 28980 57911 46763 46763 1 9606 Homo sapiens -0.10524646939870763 YESLELCRPVLQQGR Unmodified 1846.936 0.93596654 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18 CLTC Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 1 8 0 1 49.325 49.397 3 1.0858E-25 13245 20230619_1888_Aki_TMTPro18x_K_F8 238.43 208.96 103620 65806 91934 112380 77913 164330 107570 113980 168620 165590 142170 200020 243720 208220 143170 290990 258420 433090 95587 60674 94380 110190 83608 160780 108610 121270 167420 165760 151830 201790 240910 219150 154590 298440 247350 409200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 583300000 30848 826 28981 57912 46764 46764 1 9606 Homo sapiens 0.04637599569127815 YESLTDPSK Unmodified 1038.487 0.4869555 751;3177;4018;4017 K9JA46;P07900;P07900-2;Q2VPJ6;G3V2J8;B4DTA5;Q86SX1;A0A024RD80;P08238;B4DMA2;Q6PK50;Q58FF7;O14942;Q58FF6;Q58FF8 EL52;HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Putative heat shock protein HSP 90-beta 2 no no 0 0 0 3.8 0.748 2 2 1 46.801 46.864 2;3 1.788E-07 12504 20230619_1883_Aki_TMTPro18x_K_F4 215.38 144.47 868020 660330 818370 898170 937080 1077000 1047200 865670 1187700 1226300 1338800 1178600 1381800 1079500 1324100 1225400 1251500 1124200 801900 606630 837900 889420 967420 1070500 1053400 909060 1208200 1218900 1367400 1195600 1405200 1124900 1342800 1223900 1197200 1069300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3148899999.9999995 30849 3177;751;4017;4018 28982 57913;57914;57915;57916;57917 46765;46766;46767 46766 3 9606 Homo sapiens -0.03074850272855656 YESLTDPSKLDSGK Unmodified 1538.7464 0.74641766 751;3177;4018 K9JA46;P07900;P07900-2;Q2VPJ6;G3V2J8;B4DTA5;Q86SX1;A0A024RD80;P08238;B4DMA2;Q6PK50;Q58FF7;O14942;Q58FF8 EL52;HSP90AA1;HSP90AB1;HSP90AB3P;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 2 no no 0 0 1 6 0.816 1 1 1 50.368 50.446 3 6.1768E-05 13752 20230619_1887_Aki_TMTPro18x_K_F7 101.75 83.615 429980 543560 669230 512640 762550 504110 803490 535140 311990 582520 670050 235130 243210 149990 1219500 133870 136630 114510 400780 496860 660120 520990 781020 512540 792540 546430 360580 574760 651090 252300 306300 157280 1157100 137250 141040 109050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 650830000 30850 3177;751;4018 28983 57918;57919;57920 46768;46769;46770 46769 3 9606 Homo sapiens -0.0014056917239031463 YESSLYSQEYSK Unmodified 1482.6515 0.65145464 630 A0A024RAM4;P46821;A2BDK6;Q5H9P1 MAP1B;DKFZp686F1345 Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes no 0 0 0 5 0.816 1 1 1 49.29 49.354 3 1.2469E-05 13462 20230619_1885_Aki_TMTPro18x_K_F5 132.56 105.23 361510 251560 275510 327340 231130 356390 305700 327400 411690 486750 535110 614840 611400 528190 374510 665840 673980 740000 333310 231080 286780 324630 246820 357240 307360 340730 418580 487190 546700 615340 610640 554970 403150 670080 642420 701820 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1052899999.9999999 30851 630 28984 57921;57922;57923 46771;46772;46773 46772 3 9606 Homo sapiens -0.07056502643558815 YESSTASALVA Unmodified 1097.5241 0.52406928 3712 P62277 RPS13 40S ribosomal protein S13 yes yes 0 0 0 3.5 0.5 1 1 51.825 51.871 2 0.0011036 14958 20230619_1882_Aki_TMTPro18x_K_F3 124.83 99.098 371780 338700 369550 364690 402770 459560 397270 353860 445630 373830 397820 351430 316100 285940 441470 409630 399200 331480 344000 310240 376060 367500 415740 455190 402330 369460 449110 376290 406780 355840 331290 303470 444190 405410 381890 315920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1786999999.9999998 30852 3712 28985 57924;57925 46774;46775 46774 2 9606 Homo sapiens -0.020791787270809436 YETSGIGEAR Unmodified 1081.504 0.50400254 1274 P61764-2;P61764;A0A1B0GVQ5;A0A1B0GWF2;A0A1B0GTP9;A0A0D9SG72;A0A2R8Y5D4;B7Z2V7;B7Z1V5;B7Z3F4;Q59GC9;A0A994J7L2;A0A1B0GW76 STXBP1 Syntaxin-binding protein 1 yes no 0 0 0 2.5 0.5 1 1 38.004 38.062 2 6.8168E-05 8922 20230619_1881_Aki_TMTPro18x_K_F2 144.66 115.55 102780 71055 95631 115740 75940 83190 93193 86241 113870 131990 164520 183850 168370 164650 136710 179550 222220 210950 94889 65446 97553 112710 80942 86634 93667 89241 116860 132500 166660 183610 170430 171170 144510 181820 211720 200070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 225270000 30853 1274 28986 57926;57927 46776;46777 46777 2 9606 Homo sapiens -0.033489296670495605 YETSSTSAGDRYDSLLGR Unmodified 1976.9076 0.90756276 2285 B2RAH5;O14974-2;O14974;O14974-5;O14974-4;O14974-3;H0YIM2;H0YIS3 PPP1R12A Protein phosphatase 1 regulatory subunit;Protein phosphatase 1 regulatory subunit 12A yes no 0 0 1 4.5 0.5 1 1 46.148 46.208 3 2.0584E-18 12161 20230619_1885_Aki_TMTPro18x_K_F5 171.14 161.73 78275 58157 75177 68804 63156 74648 81229 76407 98727 111350 96897 106970 131080 99659 87991 143160 142750 145350 72313 53356 76415 68726 67103 75086 81399 78865 99632 110520 101020 108560 130640 105420 93557 143100 136070 138030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 447290000 30854 2285 28987 57928;57929 46778 46778 1 9606 Homo sapiens -0.04181471597098607 YEVAVPLCK Unmodified 1077.5529 0.55286699 3808;4492;740 Q07866-3;Q07866-9;Q07866;G3V5R9;Q7RTQ1;Q07866-5;Q7RTQ8;B5BU63;G3V3H3;Q07866-8;Q7RTQ4;Q7RTQ7;Q7RTP8;E7EVH7;Q7RTQ2;G3V2E7;Q7RTQ0;Q7RTQ9;Q07866-7;Q07866-10;Q07866-6;Q07866-4;Q07866-2;G5E9S8;F8W6L3;B4DGB3;Q7Z5D5;A0A024RCZ8;Q9NSK0;Q9NSK0-3;Q9NSK0-5;C9J8T5;Q9NSK0-4;C9JZE5;Q9H0B6;Q9H0B6-2;A8MZ87;A8MX29;E9PQ02 KLC1;KNS2;KLC4;KLC2 Kinesin light chain 1;Kinesin light chain 4;Kinesin light chain 2 no no 0 0 0 7.5 0.5 2 2 53.948 54.017 2;3 0.0027437 15269 20230619_1888_Aki_TMTPro18x_K_F8 85.676 55.866 239330 205760 202550 259010 177630 205690 228110 233910 233970 273950 237860 241110 290540 249100 236180 324540 277230 280150 221090 188790 208800 256460 187960 212690 227320 238150 238480 273630 246180 246630 292330 260640 243880 322180 264870 266550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 324660000 30855 3808;740;4492 28988 57930;57931;57932;57933 46779;46780 46780 2 9606 Homo sapiens 0.017192673683439352 YEVIHSK Unmodified 874.45487 0.45486751 4297 Q92576-2;Q92576;E7EVH3;B0AZS7;D6R9X2;E9PE34;A0A1B0GX99;B3KP41;A8K376 PHF3 PHD finger protein 3 yes no 0 0 0 7 0 1 38.795 38.859 3 0.031191 8825 20230619_1887_Aki_TMTPro18x_K_F7 64.265 31.144 38457 29487 38642 34935 41931 44668 41945 45460 48295 40207 45757 48255 49163 43889 42721 41613 57396 53483 35548 27050 39263 34981 43286 44452 42504 46228 48719 41172 47230 48466 49792 45302 44354 42526 54747 50687 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51836000 30856 4297 28989 57934 46781 46781 1 9606 Homo sapiens 0.012618268346727746 YEVLENK Unmodified 893.44945 0.44944778 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;B3KM27 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 4 0 1 48.31 48.35 2 0.016498 13228 20230619_1883_Aki_TMTPro18x_K_F4 109.86 32.964 90183 67070 77472 91878 95792 89998 88839 83054 115440 115360 129700 133530 141530 120630 107310 141410 170010 159670 83245 61626 80092 90685 97816 91030 90796 86239 116690 115440 132900 134310 142510 125980 113370 142680 161990 151500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170510000 30857 128 28990 57935 46782 46782 1 9606 Homo sapiens -0.0015389674780408313 YEWDVAEAR Unmodified 1137.5091 0.50908792 3447 P13639;Q8TA90;B4DPU3;Q6W6M8 EEF2 Elongation factor 2 yes no 0 0 0 2.5 1.12 1 1 1 1 49.677 49.719 2 0.00010499 14217 20230619_1880_Aki_TMTPro18x_K_F1 180.34 163.87 847840 702490 805650 802520 669340 878870 841660 836330 946340 1110000 1019800 990500 1235900 985620 926020 1201200 1178400 1146200 783720 644010 820010 803540 711930 881810 842210 864530 962170 1103400 1051900 1010900 1239500 1028700 962500 1199800 1124900 1089400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3763699999.9999995 30858 3447 28991 57936;57937;57938;57939 46783;46784;46785 46783 3 9606 Homo sapiens -0.05416625804446085 YEYHWADGTNIK Unmodified 1495.6732 0.67319314 4158 Q9H8S9;Q7L9L4;Q7L9L4-2;D6RCK3;B3KSH6;Q4W5E0;Q9H8S9-2 MOB1A;MOB1B;MOBKL1A;MOB4A MOB kinase activator 1A;MOB kinase activator 1B yes no 0 0 0 6 0 1 49.156 49.233 3 4.2096E-13 13586 20230619_1886_Aki_TMTPro18x_K_F6 162.93 124.52 201000 164610 202890 197060 192480 225650 195350 185450 216450 302740 258440 271570 297610 250880 253960 319780 299480 335760 185870 150980 205750 196740 200950 225110 197560 195360 221510 298630 264970 276290 300440 263210 261900 320920 286350 318600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212810000 30859 4158 28992 57940 46786 46786 1 9606 Homo sapiens -0.05481653104357065 YEYQPFAGK Unmodified 1101.5131 0.51311067 4000 Q59ER5;Q53H17;Q53GN4;A0A8V8TNU2;A0A8V8TNT7;O75083;A0A8V8TP22;A0A8V8TQ74;A0A8V8TQK0;V9HWG7;A0A8V8TP31;D6RD66 WDR1;HEL-S-52 WD repeat-containing protein 1 yes no 0 0 0 7.5 0.5 1 1 51.576 51.652 3 0.0016155 14237 20230619_1888_Aki_TMTPro18x_K_F8 82.645 63.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30860 4000 28993 57941;57942 46787;46788 46788 2 9606 Homo sapiens -0.03358536310724958 YEYVLHPR Unmodified 1075.5451 0.5450795 2525 B4DM26;B4DLE7;Q6UWP7-3;Q6UWP7;B4DYR5;C9K0C3;Q6UWP7-2 LCLAT1 Lysocardiolipin acyltransferase 1 yes no 0 0 0 7 0 1 41.869 41.94 3 4.8389E-06 10043 20230619_1887_Aki_TMTPro18x_K_F7 148.04 110.57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30861 2525 28994 57943 46789 46789 1 9606 Homo sapiens 0.010328761630944427 YFAGNLASGGAAGATSLCFVYPLDFAR Unmodified 2795.3377 0.33773584 3439;1072 A0A0S2Z3H3;P12235;V9GYG0;A0A0S2Z359;Q59EP7;P12236;Q6I9V5;Q59EI9 SLC25A4;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 0 0 5 0 1 65.248 65.291 3 7.754099999999999E-40 20291 20230619_1885_Aki_TMTPro18x_K_F5 217.29 204.1 7365.2 5775.7 7655 8332.6 6106.3 7336.5 8645.6 7457.3 7575.2 7356.9 9085.7 9113.8 8156.7 6638.7 9662.8 8087.1 9575.9 10674 6810.8 5308.9 7734.6 8189.5 6532.2 7493.6 8538 7615.6 7832.2 7491.5 9215.5 9089.4 8422.9 7010.8 9786 8252.3 9170.6 10107 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47520000 30862 1072;3439 28995 57944 46790 46790 1 9606 Homo sapiens 0.01188048621179405 YFAGWADK Unmodified 956.43922 0.43921744 1437 A0A384MTJ7;P30837;B2R5T2;A0A024RC95;P47895;H0YKF9 ALDH1B1;ALDH1A3 Aldehyde dehydrogenase X, mitochondrial;Aldehyde dehydrogenase family 1 member A3 yes no 0 0 0 1 0 1 56.968 56.968 2 0.032161 17262 20230619_1880_Aki_TMTPro18x_K_F1 86.833 63.276 66166 66651 65924 74344 69431 90144 83524 86561 101370 85652 87639 95242 93167 80582 90734 96547 104270 106230 61268 61048 67120 74666 72345 89849 83938 88636 101670 86929 90869 95746 94829 84455 93085 97289 99646 100790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36296000 30863 1437 28996 57945 46791 46791 1 9606 Homo sapiens -0.0407445968240836 YFCENCQSK Unmodified 1234.4747 0.47469303 2708 B7ZKS3;Q86UV5;Q86UV5-8;B7ZKR8;Q86UV5-2;Q86UV5-7;Q86UV5-3;Q86UV5-4 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes no 0 0 0 6 0 1 43.778 43.87 2 0.054202 11174 20230619_1886_Aki_TMTPro18x_K_F6 60.436 48.843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30864 2708 28997 57946 46792 46792 1 9606 Homo sapiens -0.13316533279180476 YFDEHYEYR Unmodified 1320.5411 0.54111633 3542 P33552 CKS2 Cyclin-dependent kinases regulatory subunit 2 yes yes 0 0 0 2.5 0.5 1 1 43.562 43.638 3 1.7518E-06 11202 20230619_1882_Aki_TMTPro18x_K_F3 181.53 158.89 189970 150040 163040 178980 194460 222810 200930 211310 258020 217320 242890 204700 227580 187110 213510 254100 215850 222470 175410 137630 168450 178960 199900 221700 203980 216740 258870 219030 248960 208040 232040 197130 217730 252380 206550 211610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 288520000 30865 3542 28998 57947;57948 46793 46793 1 9606 Homo sapiens -0.10633258121288236 YFDEISQDTGK Unmodified 1301.5776 0.57756142 2699 B7Z7P8;P62495-2;P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 3.5 0.957 1 2 2 1 54.935 54.969 2;3 1.2996E-08 16190 20230619_1883_Aki_TMTPro18x_K_F4 208.33 193.64 194310 156100 178620 212670 177770 198080 202750 212600 222840 254150 250000 226110 265560 203930 234070 294380 240640 255460 179540 143370 182950 209880 185440 201710 203680 217290 227140 253680 255730 230240 268870 215950 239280 292010 230280 243000 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 614000000 30866 2699 28999 57949;57950;57951;57952;57953;57954 46794;46795;46796 46796 3 9606 Homo sapiens -0.06116426015250909 YFDGSGGNNHAVEHYR Unmodified 1821.7819 0.78190874 1213 A0A140VJZ1;P45974-2;P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 4.5 0.5 1 1 35.214 35.283 4 1.7416000000000002E-25 7657 20230619_1885_Aki_TMTPro18x_K_F5 185.12 176.65 55503 33959 52819 53790 73017 71846 65898 67828 65323 62434 76068 84261 72151 61163 72322 63841 77807 83897 51221 31285 54180 52905 73975 71177 66852 69414 67004 64031 77439 83728 73764 64009 73794 65264 74434 79451 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 151550000 30867 1213 29000 57955;57956 46797;46798 46798 2 9606 Homo sapiens -0.09611093872013043 YFDHALTLR Unmodified 1134.5822 0.58219329 2593 E7ER68;B4DUD8;Q658Y4 FAM91A1 Protein FAM91A1 yes no 0 0 0 8 0 1 48.898 48.965 3 2.808E-06 13083 20230619_1888_Aki_TMTPro18x_K_F8 173.75 135.66 101010 80823 89144 96919 80371 95548 111830 110280 115500 94966 91926 84700 100530 83705 101200 103590 96750 100590 93300 74139 91482 96569 85080 97044 111020 111240 116450 96504 95788 86487 102350 87449 102660 103610 92639 95554 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 56890000 30868 2593 29001 57957 46799;46800;46801 46800 3 9606 Homo sapiens 0.020285477088464177 YFDLGLPNR Unmodified 1093.5556 0.55564418 3600 Q53GL5;P48735;P48735-2;Q13584 IDH2 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] yes no 0 0 0 3.67 3.09 1 1 1 58.256 58.277 2 0.00054298 17109 20230619_1888_Aki_TMTPro18x_K_F8 132.08 101.51 349960 239880 309630 362550 310640 422370 385100 364950 439930 402830 433400 492400 499470 432650 433320 494020 484090 578440 322960 220740 318360 356580 325350 420880 385590 377940 444730 407950 448260 493680 504610 451550 444950 499990 463330 548160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 849000000 30869 3600 29002 57958;57959;57960 46802;46803;46804 46804 3 9606 Homo sapiens 0.012608588174998658 YFDPANGK Unmodified 910.41848 0.418482 3447 P13639;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 0 0 6.5 0.5 1 1 47.759 47.843 2 0.0021968 12957 20230619_1886_Aki_TMTPro18x_K_F6 143.61 108.25 477600 358400 436430 423490 480990 560200 476340 442830 570010 630990 641930 632370 722380 536650 565940 712940 696630 634490 441080 328800 447370 424150 496430 553420 483510 465520 578740 627700 658500 638730 726810 566290 586230 708800 664840 603700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 451020000 30870 3447 29003 57961;57962 46805;46806 46805 2 9606 Homo sapiens -0.040310500620535095 YFDRVDENNPEYLR Unmodified 1828.838 0.83802663 1741 P35611-3;E7EV99;P35611;P35611-4;P35611-6;P35611-2;A0A804HL01;E7ENY0;P35611-5;Q96D30;D6RJE2;D6RF25;D6RAH3 ADD1 Alpha-adducin yes no 0 0 1 3.5 0.5 1 1 48.412 48.472 3 1.2316E-28 13457 20230619_1882_Aki_TMTPro18x_K_F3 216.27 205.17 347230 265340 326120 352140 295980 361960 325550 320520 424950 341080 349300 348030 364920 295050 323360 363080 373460 392700 320780 243690 332750 348540 311120 364200 329650 330970 424050 344030 362580 351240 369940 309830 332530 365300 356970 372600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 274090000 30871 1741 29004 57963;57964 46807;46808 46807 2 9606 Homo sapiens -0.04323885755184165 YFDSGDYNMAK Oxidation (M) 1325.5234 0.52341736 1982;358 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;O43768-6;O43768-5;O43768-7;H3BTD3;H3BQ52;A0A024R5U3;H3BMD8;P56211;P56211-2 ENSA;ARPP19;ARPP-19 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 no no 0 1 0 4.8 0.748 2 2 1 48.808 48.869 2;3 0.00027198 13251 20230619_1885_Aki_TMTPro18x_K_F5 98.04 89.641 290170 228780 244020 284300 256650 257920 290500 279430 298520 315250 330910 291460 331150 264490 324590 364210 326400 329240 267900 209940 252130 282210 266360 263400 291220 285020 305040 315890 337790 296310 337510 279050 330510 362320 312300 313070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 542320000 30872 1982;358 29005 57965;57966;57967;57968;57969 46809;46810 46810 214 2 9606 Homo sapiens -0.1263234143846148 YFDSGDYNMAK Unmodified 1309.5285 0.52850274 1982;358 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;O43768-6;O43768-5;O43768-7;H3BTD3;H3BQ52;A0A024R5U3;H3BMD8;P56211;P56211-2 ENSA;ARPP19;ARPP-19 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 no no 0 0 0 5.5 0.5 1 1 53.429 53.507 2 0.00013521 15288 20230619_1885_Aki_TMTPro18x_K_F5 123.75 95.58 66431 53309 61134 69427 48028 63741 65155 69454 67407 86546 85547 83354 94894 78497 81158 101810 96532 96746 61379 48940 62409 68712 51472 64988 64819 71012 69348 86408 87308 84633 95890 82375 83731 101590 92214 91943 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77871000 30873 1982;358 29005 57970;57971 46811;46812 46811 2 9606 Homo sapiens -0.1138803757585265 YFDTVPVAAAMCVLK Unmodified 1683.8364 0.83643542 3931 Q15393;A8K6V3;B3KQH1 SF3B3 Splicing factor 3B subunit 3 yes no 0 0 0 2.5 0.5 1 1 64.433 64.452 3 1.0058E-10 20314 20230619_1882_Aki_TMTPro18x_K_F3 157.52 129.22 245510 204430 241040 234830 223240 269520 266370 265050 266410 223360 206340 189450 196980 164390 262550 202270 214660 206060 227000 187420 244960 235210 234570 269770 266100 269940 268920 226980 214200 193080 204410 172470 262850 203070 205790 195710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 262680000 30874 3931 29006 57972;57973 46813;46814 46814 2 9606 Homo sapiens 0.021870656308237812 YFEFHGVR Unmodified 1053.5032 0.50321468 313 F8WE22;B7Z2E1;A0A024R4X9;Q9BR01-2;Q9BR01 SULT4A1 Sulfotransferase;Sulfotransferase 4A1 yes no 0 0 0 8 0 1 45.746 45.784 3 0.0018431 11788 20230619_1888_Aki_TMTPro18x_K_F8 110.31 89.789 26091 20831 29950 32578 18994 21084 27240 26411 26537 29157 30020 31613 29471 27621 30522 33506 32795 35795 24152 19165 29953 31776 20799 22305 26989 26713 27219 29381 30633 31846 30164 28926 31162 33695 31377 33963 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13636000 30875 313 29007 57974 46815 46815 1 9606 Homo sapiens -0.02139679525430438 YFEGVSPK Unmodified 925.45453 0.45453316 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 7.2 0.748 1 2 2 49.994 50.073 2;3 0.0015979 13593 20230619_1887_Aki_TMTPro18x_K_F7 140.09 112.96 401600 326280 364510 408240 397260 437230 433010 403200 459570 504910 541480 515970 555410 474400 465530 590030 568660 528900 371050 299410 374130 405870 411050 439190 435370 417090 470170 505140 552060 522100 562200 496730 481330 587320 542810 503150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 792630000 30876 3758 29008 57975;57976;57977;57978;57979 46816;46817 46816 2 9606 Homo sapiens -0.011175928851798744 YFEVEEADGNK Unmodified 1299.5619 0.56191135 3557 P36551 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 0 0 0 2 0 1 51.358 51.404 3 0.022392 15067 20230619_1881_Aki_TMTPro18x_K_F2 59.177 50.448 162510 87547 107370 145790 138100 156970 154680 149080 211310 182590 197510 213350 251770 222020 153810 294880 259770 250490 149530 80761 114360 142450 141730 157610 156660 153780 211470 183810 205630 215670 250770 232450 164760 292240 247460 238420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52448000 30877 3557 29009 57980 46818 46818 1 9606 Homo sapiens -0.075887125322879 YFFAVDTAYVAK Unmodified 1393.6918 0.69180331 1970 E9PIZ0;C9JST7;A6NGW1;A8K509;O95070 YIF1A Protein YIF1A yes no 0 0 0 2 0 1 62.639 62.648 3 0.00068233 19829 20230619_1881_Aki_TMTPro18x_K_F2 91.855 79.228 42389 33186 39955 40277 39143 45670 44318 43211 48367 47976 47853 43345 52307 43368 44939 52476 51389 53973 39167 30447 40784 40171 40887 45712 44517 44439 49037 48098 49284 44240 52890 45233 46225 52648 49124 51238 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36753000 30878 1970 29010 57981 46819 46819 1 9606 Homo sapiens 0.01070508537486603 YFFDFLDEQAEK Unmodified 1550.6929 0.69292553 3230 O15031;Q3LIB1;Q2TBE4;A6QRG9;Q16293 PLXNB2;Nbla00445;MM1 Plexin-B2 yes no 0 0 0 4.5 1.12 1 1 1 1 64.8 64.833 3 0.0015963 20108 20230619_1885_Aki_TMTPro18x_K_F5 81.92 62.596 9757.8 9615.8 12046 10330 10045 12243 12198 11971 13094 12867 12837 12749 15449 13598 17494 14308 12887 17740 9051.8 8805.2 12008 10408 10652 12229 12206 12271 13282 12955 13306 12980 15779 14042 17483 14569 12408 16795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42823000 30879 3230 29011 57982;57983;57984;57985 46820 46820 1 9606 Homo sapiens -0.06039321884236415 YFFFDDGNGLK Unmodified 1321.5979 0.59790293 2807 D3DP46;P61009 SPCS3 Signal peptidase complex subunit 3 yes no 0 0 0 7 0 1 63.059 63.091 3 7.4376E-05 19221 20230619_1887_Aki_TMTPro18x_K_F7 102.52 77.671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30880 2807 29012 57986 46821 46821 1 9606 Homo sapiens -0.050032105647687786 YFFYSSGEK Unmodified 1126.4971 0.49712625 2663;98 P49840;A0A024R0L5;A8MT37;Q68D16;A0A7I2YQG6;A0A7I2V2J2;M0QYV0;A0A7I2V2P0;A0A7I2V4X2;P49841-2;P49841;B5BUC0;Q6FI27;A0A7I2YQK0;A0A3B3ITW1;A0A7I2V5M2;A0A7I2V5G5;A0A7I2V3J4 GSK3A;DKFZp686D0638;GSK3B Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta no no 0 0 0 3.33 3.3 2 1 55.872 55.893 2;3 1.7359E-05 16786 20230619_1880_Aki_TMTPro18x_K_F1 138.4 112.38 177520 150270 166340 183400 154010 162440 181310 179340 189140 208480 204830 190760 215530 189640 207330 238780 227470 227160 164100 137830 169810 182250 161630 166290 181530 182870 192990 208550 209820 194540 219300 198240 212260 238420 217440 215880 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 158810000 30881 98;2663 29013 57987;57988;57989 46822;46823;46824 46823 3 9606 Homo sapiens -0.06106242547616603 YFGCELGAQTQFDVK Unmodified 1761.8032 0.80322103 406 A0A024R6Q1;P55010;H0YLZ1;Q32Q19;Q05DF3;H0YN40;H0YMJ8;H0YM54 EIF5 Eukaryotic translation initiation factor 5 yes no 0 0 0 7 0.816 1 1 1 60.694 60.732 3 2.4877E-14 18108 20230619_1887_Aki_TMTPro18x_K_F7 185.95 172.38 139990 111740 128070 162990 123640 141670 153360 157420 144900 175190 155920 176860 176470 161450 149100 210400 210220 231450 129340 102720 131250 160030 129580 145180 152690 160240 148730 176060 160500 178930 178300 169640 155810 211610 200700 219530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 291560000 30882 406 29014 57990;57991;57992 46825;46826 46826 2 9606 Homo sapiens -0.04720844887538078 YFGDFEK Unmodified 904.39668 0.39668393 2885 E5RIJ0;H0YBJ0;I1WZN9;E7EW18;Q53EV2;P06746;E9PIC6 POLB DNA polymerase beta yes no 0 0 0 4.5 0.5 1 1 55.283 55.321 2 0.020935 15973 20230619_1885_Aki_TMTPro18x_K_F5 103.92 70.798 79074 72061 79593 89523 95590 105060 111570 105960 117340 89987 98173 99226 103140 85303 98744 98645 97198 115240 73173 66093 81134 89173 98425 105070 111690 107770 118360 92119 101870 99866 104880 89195 100410 99843 93139 109210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40444000 30883 2885 29015 57993;57994 46827 46827 1 9606 Homo sapiens -0.05933854810609773 YFGDIISVGQR Unmodified 1253.6404 0.64043645 4332 Q96CN7;D6RGE2;Q9Y3B5 ISOC1 Isochorismatase domain-containing protein 1 yes no 0 0 0 1.5 0.5 1 1 59.471 59.484 3 1.9313E-12 18386 20230619_1881_Aki_TMTPro18x_K_F2 201.84 174.22 28514 17915 25267 25717 29996 41685 28318 28832 42089 32498 32894 31833 45688 32219 33137 50039 36458 43234 26303 16482 26020 25519 30842 40610 29068 30427 41722 32670 34719 32407 45587 34187 34196 49560 34898 41111 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111790000 30884 4332 29016 57995;57996 46828;46829 46829 2 9606 Homo sapiens 0.02376184563490824 YFGGCPVIK Unmodified 1039.5161 0.51608756 3081 H7BXY3;Q7L2E3-3;Q7L2E3;Q7L2E3-2 DHX30 Putative ATP-dependent RNA helicase DHX30 yes no 0 0 0 3 0 1 53.486 53.539 3 0.015861 15727 20230619_1882_Aki_TMTPro18x_K_F3 62.2 31.63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30885 3081 29017 57997 46830 46830 1 9606 Homo sapiens -0.002089844575493771 YFGGTEDR Unmodified 943.40356 0.40356022 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 0 3 0.816 1 1 1 39.869 39.926 2 2.0364E-05 9549 20230619_1882_Aki_TMTPro18x_K_F3 191.63 160.32 1632800 1234300 1344100 1382700 1594500 1618200 1629000 1629400 1927800 2055500 2186700 2201000 2347200 1903900 1813900 2306400 2359800 2122100 1506900 1131800 1393200 1387900 1637300 1619500 1649900 1674900 1958300 2058700 2237800 2217800 2364800 1995000 1886600 2299700 2250900 2018400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3275699999.9999995 30886 1426 29018 57998;57999;58000 46831;46832;46833 46832 3 9606 Homo sapiens -0.07040541930052768 YFGRDPADGR Unmodified 1152.5312 0.53122035 4270 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 1 5.5 0.5 1 1 36.973 37.053 3 0.017948 8316 20230619_1885_Aki_TMTPro18x_K_F5 68.525 52.272 54393 41047 52960 50031 60809 66264 64011 65017 80709 66064 67199 66481 80196 61378 63856 82003 78142 89732 50260 37667 54022 50017 62647 65744 64860 66508 80716 66757 70131 67341 80634 64624 66112 82440 74708 85103 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70366000 30887 4270 29019 58001;58002 46834 46834 1 9606 Homo sapiens -0.038944013360151075 YFGVLQR Unmodified 881.47594 0.4759373 1301 B3KQU6;A0A1U9X845;Q8IXM6-2;Q8IXM6;H0Y6T6 NRM Nurim yes no 0 0 0 3.5 0.5 1 1 51.119 51.169 2 0.024225 14506 20230619_1883_Aki_TMTPro18x_K_F4 99.511 60.292 242320 196080 236260 253490 222790 268660 260130 294200 289960 218910 235390 233540 247030 215910 263550 258470 271390 268290 224000 179990 240440 251500 233690 270990 261140 296700 291300 225780 244670 235990 252620 225540 268110 259630 259570 254730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162670000 30888 1301 29020 58003;58004 46835 46835 1 9606 Homo sapiens 0.030458369341886282 YFHHMGK Oxidation (M) 934.41196 0.41195684 2380 B3KPW1;Q6GPH4-6;Q6GPH4-2;Q6GPH4-7;Q6GPH4 XAF1 XIAP-associated factor 1 yes no 0 1 0 5.5 0.5 1 1 50.404 50.48 2 0.050221 13928 20230619_1885_Aki_TMTPro18x_K_F5 79.033 50.634 448460 286190 358870 420420 312830 426770 463500 390610 172010 576440 578530 843100 900590 758950 508060 931390 875490 1005300 413420 263350 371850 413400 332710 429930 449880 406950 209750 579860 590120 840460 890400 794700 546160 935970 835010 953590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 395790000 30889 2380 29021 58005;58006 46836 46836 1467 1 9606 Homo sapiens -0.05787266494405685 YFIAPAK Unmodified 808.44833 0.44832557 558 A0A024R972;P11047 LAMC1 Laminin subunit gamma-1 yes no 0 0 0 3 0 1 52.069 52.134 2 0.044438 15120 20230619_1882_Aki_TMTPro18x_K_F3 94.669 46.427 168870 133170 147390 160110 160570 187660 183880 168870 216330 215650 191420 195600 231710 160500 188460 271510 220020 213780 155950 122160 151810 159840 166530 187230 184980 175080 217680 214840 199330 198390 232950 172680 194600 267560 210160 203680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65875000 30890 558 29022 58007 46837 46837 1 9606 Homo sapiens 0.03643933673947686 YFIEDGR Unmodified 898.41848 0.418482 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;Q86SE4;H0Y5C3;Q7Z2I3 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 3.5 0.5 1 1 46.561 46.622 2 0.047651 12636 20230619_1882_Aki_TMTPro18x_K_F3 87.284 69.919 242400 194890 241410 230370 175060 212240 225130 210180 265010 329950 326420 317630 351020 261940 341380 329040 302890 317730 224110 178750 244250 229600 188630 215980 225470 218140 270440 326540 333070 321040 356660 275760 345120 329010 290280 301850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 215820000 30891 2005 29023 58008;58009 46838 46838 1 9606 Homo sapiens -0.03479050062037459 YFILPDSLPLDTLLVDVEPK Unmodified 2286.2399 0.23990251 3718 P62314;J3QLI9;Q7Z5A3 SNRPD1 Small nuclear ribonucleoprotein Sm D1 yes no 0 0 0 7.5 0.5 1 1 68.055 68.074 3 0.003702 21143 20230619_1888_Aki_TMTPro18x_K_F8 66.965 56.768 18208 11100 17017 17923 19698 18789 16238 20866 23895 22867 19356 22548 19482 15780 21976 22486 22414 19949 16800 10228 17424 17546 20151 18980 16823 21210 23744 22986 19917 22659 19997 16711 22329 22346 21424 18983 2 2 2 2 2 2 2 2 2 2 1 2 2 1 2 2 2 2 7151500 30892 3718 29024 58010;58011 46839;46840 46840 2 9606 Homo sapiens 0.1482321503476669 YFIRDEFLR Unmodified 1257.6506 0.6506072 1073 A0A0S2Z3H8;A0A7I2V5R6;Q5JWF2;Q5JWF2-2;P63092-4;P63092-3;P63092;P63092-2;Q5JWE9;A0A0S2Z3S5;Q14455;A0A590UJQ9;A0A590UK28;Q5FWY2;A0A804HIH4;B0AZR9;A0A0A0MR13;A0A590UJF0;A0A590UJY2;O60726;O75633;O75632 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short yes no 0 0 1 5 3 1 1 53.049 53.103 3 0.00031309 15833 20230619_1881_Aki_TMTPro18x_K_F2 122.33 88.439 127870 111530 123070 130690 116120 120520 119620 131100 139650 139840 141490 137430 158070 128790 145770 162440 150380 142980 118250 102250 125330 130320 121230 122930 121110 133420 141270 140770 145790 139400 160170 134910 148790 161570 143780 136040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 134750000 30893 1073 29025 58012;58013 46841;46842 46841 2 9606 Homo sapiens 0.03208792288683071 YFLDNLDK Unmodified 1026.5022 0.50221163 526 A0A024R8M0;Q14344;Q14344-2;B4DWV9 GNA13 Guanine nucleotide-binding protein subunit alpha-13 yes no 0 0 0 6.5 0.5 1 1 59.172 59.238 2 0.0025947 17796 20230619_1886_Aki_TMTPro18x_K_F6 124.23 68.514 215430 190090 194360 219290 160430 209050 219150 204500 211870 257970 262600 247680 299000 238150 238330 291680 261680 284290 199140 174250 198880 218950 171140 212050 217400 210750 218470 257470 268500 251680 300980 248900 245000 291680 250300 270020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66327000 30894 526 29026 58014;58015 46843;46844 46843 2 9606 Homo sapiens -0.009979386850091032 YFLFYDGETVSGK Unmodified 1524.7137 0.71366097 252 Q4G0F5;A0A024R3L9;H0YCI7 VPS26B Vacuolar protein sorting-associated protein 26B yes no 0 0 0 8 0 1 62.816 62.841 3 0.016487 19021 20230619_1888_Aki_TMTPro18x_K_F8 61.375 53.464 88078 74859 90332 95480 87138 94527 89989 96995 95256 112710 104430 105680 127800 99952 101010 130040 110030 130460 81480 68695 91548 94723 90815 95722 90800 99325 97248 112810 107730 107430 128350 104940 103850 130120 105330 123830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 162210000 30895 252 29027 58016 46845 46845 1 9606 Homo sapiens -0.02770731504597279 YFLHDDRDDGVDYWAK Unmodified 2013.8857 0.88570511 4629 Q9NYF8-2;Q9NYF8;Q9NYF8-4;H0YF14;B0AZU3 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 1 4 1.41 1 1 1 1 1 54.832 54.877 4 0.0008506 16147 20230619_1883_Aki_TMTPro18x_K_F4 84.14 74.956 89813 71590 86769 100160 85534 100290 99781 99833 113260 105110 105700 108700 112330 102690 107550 123260 120390 123930 83011 65777 88470 98766 89385 101350 100200 102180 114310 106080 109130 110010 114270 107190 110240 123530 115090 117690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 205000000 30896 4629 29028 58017;58018;58019;58020;58021 46846 46846 1 9606 Homo sapiens -0.08068231555012062 YFLVGAGAIGCELLK Unmodified 1609.8538 0.85380004 134 A0A024R1A3;P22314-2;P22314 UBE1;UBA1 Ubiquitin-like modifier-activating enzyme 1 yes no 0 0 0 3.5 0.5 1 1 64.481 64.501 3 4.6798E-14 20335 20230619_1882_Aki_TMTPro18x_K_F3 178.58 144.2 220310 177060 211520 224000 179800 207600 218030 211570 228190 166190 151980 144220 151970 139500 211480 171290 174630 156640 203630 162500 215200 222160 190360 211240 217950 214750 228690 169830 159640 147340 158010 145700 211740 170950 167320 149000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 235840000 30897 134 29029 58022;58023 46847 46847 1 9606 Homo sapiens 0.07326729228134354 YFLWVVK Unmodified 953.53747 0.53747492 1416 A0A384ME16;Q6ICN0;B0LPF3;P62993;B3KR50;P62993-2 GRB2 Growth factor receptor-bound protein 2 yes no 0 0 0 6 0 1 63.773 63.82 2 0.05203 19862 20230619_1886_Aki_TMTPro18x_K_F6 85.306 61.152 128460 125770 150700 132650 148810 188890 164030 175600 225930 74981 68304 46169 54247 46616 114640 57768 98205 48406 119100 115150 151140 134230 155360 186370 166340 177520 219860 80593 76848 48344 58772 48676 114260 57538 93776 46258 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 115780000 30898 1416 29030 58024 46848 46848 1 9606 Homo sapiens 0.0588476863346159 YFNSYTLTGR Unmodified 1220.5826 0.58258722 4367 Q96IX5 USMG5 Up-regulated during skeletal muscle growth protein 5 yes yes 0 0 0 3.5 0.5 1 1 52.382 52.423 2 3.8919E-05 15118 20230619_1883_Aki_TMTPro18x_K_F4 150.66 129.22 126940 100350 112520 139390 132010 153460 151400 160420 175170 102670 120950 107260 104030 90200 158880 136130 142110 119630 117240 92198 115990 137680 136210 154190 152210 161840 174650 107090 125930 108300 109360 95996 159530 135200 135970 113880 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 225380000 30899 4367 29031 58025;58026 46849 46849 1 9606 Homo sapiens -0.018880773619684987 YFPGHSK Unmodified 834.40244 0.40243801 223 Q6UXN9;A0A024R333 WDR82;TMEM113 WD repeat-containing protein 82 yes no 0 0 0 2 0 1 37.81 37.873 3 1.7363E-05 8842 20230619_1881_Aki_TMTPro18x_K_F2 143 105.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30900 223 29032 58027 46850 46850 1 9606 Homo sapiens -0.021387115082802666 YFPTQALNFAFK Unmodified 1445.7343 0.73433683 3439;3388;1072 A0A0S2Z3H3;P12235;A8K787;V9GYG0;A0A0S2Z359;Q59EP7;Q9H0C2;P05141;Q6NVC0;P12236;Q6I9V5;Q59EI9 SLC25A4;SLC25A31;SLC25A5;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed no no 0 0 0 5.5 0.5 1 1 63.881 63.927 3 4.7419E-13 19876 20230619_1886_Aki_TMTPro18x_K_F6 194.5 159.81 1246400 1167000 1155500 1188200 1244000 1554400 1423500 1620600 1828000 630310 572120 329700 375340 284860 959110 391540 399790 211920 1152900 1068300 1183200 1203900 1292200 1545200 1436800 1623400 1785200 682840 636980 348250 416910 301120 930960 383630 386620 203870 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2415100000 30901 1072;3388;3439 29033 58028;58029 46851;46852 46852 2 9606 Homo sapiens 0.029299036657448596 YFQFQEEGK Unmodified 1174.5295 0.52948901 3234 Q53R19;O15144;A0A024R408;Q9BXV5 ARPC2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 5.5 0.5 1 1 53.557 53.631 3 8.2443E-07 15470 20230619_1886_Aki_TMTPro18x_K_F6 134.05 121.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30902 3234 29034 58030;58031 46853;46854 46854 2 9606 Homo sapiens -0.050794551446415426 YFQFQEEGKEGENR Unmodified 1759.7802 0.7801774 3234 Q53R19;O15144;A0A024R408;Q9BXV5 ARPC2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 1 4 1 1 1 47.371 47.449 3 1.6401E-08 12984 20230619_1882_Aki_TMTPro18x_K_F3 151.22 137.8 182500 185570 227050 211080 282420 251120 274650 239970 167710 243910 233350 150230 157740 112390 298860 103740 100280 84351 169350 170000 227630 211700 287830 250850 274120 246040 179880 243200 232800 155490 169650 116890 289380 103990 97756 80381 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147050000 30903 3234 29035 58032;58033 46855;46856 46855 2 9606 Homo sapiens -0.0693214768064081 YFQGDLK Unmodified 869.42832 0.42831841 3918 Q15120;Q15120-2 PDK3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial yes no 0 0 0 7 0 1 50.09 50.171 2 0.006312 13657 20230619_1887_Aki_TMTPro18x_K_F7 109.86 37.629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30904 3918 29036 58034 46857 46857 1 9606 Homo sapiens -0.011618620566650861 YFQHLLGK Unmodified 1004.5444 0.54435122 874 Q9Y4L1;A0A384P5T6;A0A087X054;A0A494C039;B7Z2N4;K7EQK2;B3KXH0;A0A8Q3SHG4;E9PJ21;Q6IN67;A0A0G2JRS0;A0A087WWI4;Q05D91;J3QLE9;J3QQH7;Q9Y4L1-2;B7Z602;A0A024R3G0;J3KTF1;J3QL06;B7Z4E6;A0A8Q3SHP7;A0A0G2JRG7;A0A0G2JRT9;Q9BST8 HYOU1 Hypoxia up-regulated protein 1 yes no 0 0 0 4.5 0.5 1 1 53.992 54.035 3 0.0018613 15468 20230619_1885_Aki_TMTPro18x_K_F5 110.12 80.97 414420 343060 375800 431240 436120 525770 482720 465090 592250 496240 478540 522870 541820 423410 550900 599740 554470 583020 382930 314790 386310 429380 450060 522950 487190 480190 592500 500880 499540 526270 551230 449510 560510 598740 530680 553830 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 667980000 30905 874 29037 58035;58036 46858;46859 46859 2 9606 Homo sapiens 0.0422608151403665 YFQINQDEEEEEDED Unmodified 1930.7228 0.72284126 3174 K7ERI7;Q7Z4W8;P35268 RPL22 60S ribosomal protein L22 yes no 0 0 0 2 0.816 1 1 1 58.233 58.248 2 3.4254E-06 17749 20230619_1880_Aki_TMTPro18x_K_F1 120.68 115.7 158800 123560 144100 143520 132360 173730 168280 151200 166190 187950 186730 174590 202090 184840 165350 231020 198440 225040 146680 113320 147470 143730 139590 172820 167530 157030 170350 187590 191190 178320 204130 192730 170990 230870 189730 213710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1370500000 30906 3174 29038 58037;58038;58039 46860;46861;46862 46860 3 9606 Homo sapiens -0.2052912425813247 YFSEADK Unmodified 858.37595 0.37594848 1454 A0A384N6C2;A0A7I2V2T3;H0Y4R1;A0A994J749;P12268;E7ETK5;A0A7I2YQK5 IMPDH2 Inosine-5'-monophosphate dehydrogenase 2 yes no 0 0 0 3.5 0.5 1 1 46.022 46.083 3 0.018888 12194 20230619_1883_Aki_TMTPro18x_K_F4 73.616 50.787 74290 56491 65969 69205 69588 77851 75383 74225 93300 87522 101820 95713 94604 85000 86250 91391 106780 95828 68600 51840 67781 68965 72206 77986 76234 76437 94335 88009 103700 96445 96429 88352 89007 91983 101890 91011 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61075000 30907 1454 29039 58040;58041 46863 46863 1 9606 Homo sapiens -0.05890445190289029 YFSLPFCVGSK Unmodified 1303.6271 0.62709457 10 Q96JZ5;A0A024QYS2;Q9HD45;Q5TB53 SMBP;TM9SF3 Transmembrane 9 superfamily member 3 yes no 0 0 0 5 0 1 63.185 63.231 3 0.0011381 19387 20230619_1885_Aki_TMTPro18x_K_F5 100.55 73.224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30908 10 29040 58042 46864 46864 1 9606 Homo sapiens -0.012573895401374102 YFSSMAEFLK Unmodified 1221.574 0.57399637 2904 E7EVX8;Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes no 0 0 0 2 0 1 63.511 63.519 3 0.00036139 20212 20230619_1881_Aki_TMTPro18x_K_F2 109.66 93.774 29142 25632 29282 28652 27021 35792 29415 33681 34250 28008 29681 25777 35557 23499 31711 29012 33531 27875 26960 23488 29702 28793 28362 35590 29688 34384 34424 28551 30900 26217 35876 24640 32395 29013 32026 26509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30824000 30909 2904 29041 58043 46865 46865 1 9606 Homo sapiens -0.027927673228077765 YFSSMAEFLK Oxidation (M) 1237.5689 0.56891099 2904 E7EVX8;Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes no 0 1 0 8 0 1 58.38 58.427 3 0.029639 17181 20230619_1888_Aki_TMTPro18x_K_F8 50.284 35.311 29805 24707 29302 32583 25470 29335 30579 23341 31981 28959 29230 24927 28885 28486 28634 31915 30593 30675 27558 22683 29771 32204 26904 29772 30572 24448 32383 28868 30081 25630 29509 29434 29248 31940 29253 29148 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6598800 30910 2904 29041 58044 46866 46866 1722 1 9606 Homo sapiens -0.040370711854166075 YFTCDEGHGIFVR Unmodified 1599.714 0.71401209 1717 Q14203;E7EX90;Q14203-6;Q14203-4;Q14203-3;A0A804CDA6;A0A7P0Z4C3;Q6MZZ3;Q6AWB1;Q6AWB3;C9JZA4;C9JTE5;C9JKG6;C9JJD0;C9JJN7;E9PCY0 DCTN1;DKFZp686I0746;DKFZp686E0752;DKFZp686E191 Dynactin subunit 1 yes no 0 0 0 6 0.816 1 1 1 50.326 50.404 3 1.0683E-16 13773 20230619_1887_Aki_TMTPro18x_K_F7 217.24 193.31 169380 139170 165150 170190 159010 175640 193550 211320 208840 220810 196910 224240 214110 170180 188920 233190 233190 232550 156590 127670 168070 169470 166570 178020 193680 213580 211550 222620 203530 225560 216750 180710 195240 233150 222680 220880 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 304170000 30911 1717 29042 58045;58046;58047 46867;46868 46868 2 9606 Homo sapiens -0.06185635056385763 YFTDAGLK Unmodified 913.45453 0.45453316 607 B7Z4K8;E7ETZ4;B3KM68;A0A024RA42;Q9Y6E2;B5MCH7;B5MCE7;Q75MG1;E9PFD4 BZW2 Basic leucine zipper and W2 domain-containing protein 2 yes no 0 0 0 7.67 0.471 1 2 53.117 53.189 2;3 1.1548E-05 14912 20230619_1888_Aki_TMTPro18x_K_F8 121.99 65.731 228500 218130 240180 199760 227180 256480 269630 253730 314860 251320 277380 282750 291100 226350 285050 312440 300410 300530 211600 199510 242600 204290 238180 255120 270780 259320 316480 255170 287040 283830 296270 239950 290970 311840 287280 285570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 609520000 30912 607 29043 58048;58049;58050 46869;46870 46870 2 9606 Homo sapiens -0.00565592885186561 YFTEAGLK Unmodified 927.47018 0.47018322 4151 Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3;Q53FN7;Q7L1Q6-2;D3DN77;C9IZ80;B3KU41 BZW1;hCG_2022736 Basic leucine zipper and W2 domain-containing protein 1 yes no 0 0 0 7.5 0.5 1 1 52.88 52.953 2 0.0020362 14894 20230619_1887_Aki_TMTPro18x_K_F7 133.12 79.148 391660 318980 379630 380900 385830 443990 393910 409540 461180 482270 460910 448960 511750 405150 398220 544830 488720 430240 362050 292560 386730 380480 400750 443390 398950 422600 466330 482480 474930 455950 515160 426740 412730 538450 466330 410070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 300750000 30913 4151 29044 58051;58052 46871;46872 46871 2 9606 Homo sapiens 0.00354693631857117 YFTLGLPTGSTPLGCYK Unmodified 1873.9284 0.92842155 2030 A8K3S1;P46926;D6RAY7;P46926-2;D6R9P4;D6R917;D6RB13;A0A024R9X5;Q8TDQ7-3;Q8TDQ7-2;Q8TDQ7 GNPDA1;GNPDA2 Glucosamine-6-phosphate isomerase;Glucosamine-6-phosphate isomerase 1;Glucosamine-6-phosphate isomerase 2 yes no 0 0 0 6 0 1 63.455 63.504 3 1.5035E-13 19683 20230619_1886_Aki_TMTPro18x_K_F6 156.17 139.09 275300 263430 277140 271060 283240 359580 305660 297120 361080 253090 215370 195740 234120 222910 280670 271030 262500 252440 254840 241160 281490 274400 294750 355440 308530 306630 358700 256730 228680 202420 240810 231520 283530 270600 251270 240010 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 252570000 30914 2030 29045 58053 46873;46874 46874 2 9606 Homo sapiens 0.026414472488568208 YFTWDPSR Unmodified 1070.4821 0.48214489 3900;2497 Q14697-2;E9PKU7;B4DZ53;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592;B4DIW2 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 0 5.33 3.09 1 1 1 56.102 56.142 2 0.0017655 16179 20230619_1888_Aki_TMTPro18x_K_F8 158.2 133.2 274220 243290 309390 295450 315540 398840 359130 371620 384900 283870 269550 215010 232310 198310 410420 214100 225060 189680 253960 223110 311480 295510 328700 394660 360360 379000 385760 289670 280390 220980 246600 205980 402870 214210 216880 180550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 312880000 30915 3900;2497 29046 58054;58055;58056 46875;46876 46876 2 9606 Homo sapiens -0.050276896249670244 YFVDHNTR Unmodified 1050.4883 0.4882929 423 B4DHF6;B4DIN7;A0A024R711;A8K9T5;O00308-3;Q9H0M0-6;O00308-2;Q9H0M0-3;O00308;Q9H0M0 WWP2;WWP1 E3 ubiquitin-protein ligase;NEDD4-like E3 ubiquitin-protein ligase WWP2;NEDD4-like E3 ubiquitin-protein ligase WWP1 yes no 0 0 0 6 0 1 34.741 34.788 3 0.003495 7542 20230619_1886_Aki_TMTPro18x_K_F6 86.332 62.978 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30916 423 29047 58057 46877 46877 1 9606 Homo sapiens -0.03493171393438388 YFVEAGAMAVR Unmodified 1212.5961 0.59612879 3470 P17987;E7ERF2;E7EQR6;F5H282;F5GZ03 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 5.33 3.09 1 1 1 54.66 54.703 2 5.5868E-12 15545 20230619_1888_Aki_TMTPro18x_K_F8 204.91 175.53 890880 726130 785860 811600 718250 852830 846740 835990 888500 936390 759610 801340 912790 740050 911970 980160 882630 923050 822950 665590 806220 813470 755520 858980 847740 857890 898530 936750 792740 817450 926490 778370 926130 977720 845060 877180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1421500000 30917 3470 29048 58058;58059;58060 46878;46879;46880 46880 3 9606 Homo sapiens -0.0016654285439017258 YFVEAGAMAVR Oxidation (M) 1228.591 0.59104341 3470 P17987;E7ERF2;E7EQR6;F5H282;F5GZ03 TCP1 T-complex protein 1 subunit alpha yes no 0 1 0 7.5 0.5 1 1 49.405 49.483 2 0.0015881 13254 20230619_1888_Aki_TMTPro18x_K_F8 94.85 76.41 293780 244720 258530 298580 314100 286320 312990 295730 333750 319290 318020 301110 328440 258360 314990 356430 333720 339250 271410 224490 266560 296950 321420 290880 316250 302190 338290 320860 327420 305200 334120 273200 321810 355510 319160 322380 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 502420000 30918 3470 29048 58061;58062 46881;46882 46882 2115 2 9606 Homo sapiens -0.01410846717021741 YFYVSAEQVVQGMK Oxidation (M) 1663.7916 0.79159371 3365 O95881 TXNDC12 Thioredoxin domain-containing protein 12 yes yes 0 1 0 2 0 1 60.69 60.702 3 0.0066951 18898 20230619_1881_Aki_TMTPro18x_K_F2 60.157 49.499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30919 3365 29049 58063 46883 46883 1968 1 9606 Homo sapiens -0.013750419108873757 YGAAEPHTIAAFLGGAAAQEVIK Unmodified 2284.1852 0.18518159 3858 Q13564-3;Q13564-2;Q13564;Q13564-4;J3QLH4 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes no 0 0 0 1 0 1 61.977 61.977 3 2.9179E-19 19308 20230619_1880_Aki_TMTPro18x_K_F1 113.17 95.884 20566 13944 19554 22231 20651 23604 25073 21696 27824 25351 25021 25864 28836 24462 20085 28185 30368 29356 18989 12840 19985 21773 21490 23708 25097 22407 28078 25451 25967 26185 28904 25480 21189 28305 28950 27874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 556290000 30920 3858 29050 58064 46884 46884 1 9606 Homo sapiens 0.0944564100673233 YGAAMALGICCAGTGNK Unmodified 1713.7637 0.76368118 832 Q99460;A0A087WW66;Q99460-2;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;Q05BX4;A0A7I2V4X0;A0A7I2YQI9 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 3 0 1 56.541 56.577 3 1.0726E-10 16974 20230619_1882_Aki_TMTPro18x_K_F3 145.1 134.15 55891 47571 53074 59629 46980 58952 61208 54432 63718 68832 59939 55465 67704 59398 51037 66096 63544 68033 51672 43646 54110 59211 49716 59547 60959 56330 64668 68396 61972 57048 68083 61510 52966 66378 60708 64581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75908000 30921 832 29051 58065 46885 46885 1 9606 Homo sapiens -0.06465011434261214 YGAAMALGICCAGTGNK Oxidation (M) 1729.7586 0.7585958 832 Q99460;A0A087WW66;Q99460-2;A0A7I2V523;A0A7P0MW50;A0A7I2V5C8;A0A7I2YQY1;A0A7I2V262;A0A7I2V2K8;A0A7I2V641;Q05CW6;Q05BX4;A0A7I2V4X0;A0A7I2YQI9 PSMD1 26S proteasome non-ATPase regulatory subunit 1 yes no 0 1 0 3 0 1 51.798 51.864 3 4.4483E-07 14972 20230619_1882_Aki_TMTPro18x_K_F3 118.51 86.893 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30922 832 29051 58066 46886 46886 497 1 9606 Homo sapiens -0.07709315296870045 YGADALR Unmodified 764.3817 0.38170256 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;A0A804HK69;A0A804HKU1 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 4.5 0.5 1 1 38.434 38.502 2 0.018314 8914 20230619_1883_Aki_TMTPro18x_K_F4 107.43 42.653 601920 458420 552520 602350 617640 661570 644750 620550 810260 661930 748630 783360 736200 648840 732510 785480 919530 767980 555960 420980 566640 597150 637320 663540 653530 638070 813090 670770 770740 785240 752020 680700 755470 786070 876950 730170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 385340000 30923 1736 29052 58067;58068 46887;46888 46887 2 9606 Homo sapiens -0.009913018879728952 YGAHNYHPLPVALER Unmodified 1735.8794 0.87943794 1194 A0A140VJQ4;P04181 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form yes no 0 0 0 4.5 3.5 1 1 41.569 41.568 4 7.6327E-14 10748 20230619_1880_Aki_TMTPro18x_K_F1 145.69 126.86 148320 122060 138960 149510 164990 179810 170390 168910 189970 187350 180700 179740 203410 165660 196620 210010 217580 214070 137080 111970 142400 149130 169470 179280 172080 173770 192150 188140 186860 182380 206540 173760 201280 210510 207950 203300 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 446820000 30924 1194 29053 58069;58070 46889;46890 46889 2 9606 Homo sapiens 0.040933397948037964 YGALALQEIFDGIQPK Unmodified 1761.9301 0.93013611 1462 A0A384NKW7;P55060-3;P55060;P55060-4;B4DM31;B4DUC5;B4DPS6;B4DS32 CSE1L Exportin-2 yes no 0 0 0 1.5 0.5 1 1 65.349 65.353 3 0.046265 20981 20230619_1881_Aki_TMTPro18x_K_F2 44.252 26.451 11813 12288 13481 13541 13115 11310 11729 15402 16038 15702 16932 17804 22544 14219 19672 22333 19802 24240 10954 11253 13543 13554 13593 11714 12057 15451 16139 15909 17581 17870 22659 15240 20077 22406 18976 22987 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99266000 30925 1462 29054 58071;58072 46891 46891 1 9606 Homo sapiens 0.07964824329087605 YGALVICETSEQK Unmodified 1496.7181 0.71809442 2870 E5KS95;P43897;P43897-2;B4DHY8 TSFM Elongation factor Ts, mitochondrial yes no 0 0 0 6 0 1 54.058 54.135 3 6.7124E-05 15665 20230619_1886_Aki_TMTPro18x_K_F6 108.37 84.997 76014 57954 62658 73555 58091 69536 77356 75717 88204 90082 91268 89013 100250 83249 92104 104540 94895 105910 70156 53202 64772 72946 61300 70749 77212 77321 89380 90234 93880 90249 101630 87209 94028 104750 90844 100540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70943000 30926 2870 29055 58073 46892 46892 1 9606 Homo sapiens -0.010395903533435558 YGASLRK Unmodified 793.44464 0.44463717 3698 P61513;Q6P4E4;E9PEL3;G5E9R3 RPL37A 60S ribosomal protein L37a yes no 0 0 1 3.5 0.5 1 1 36.84 36.89 3 0.02068 8279 20230619_1883_Aki_TMTPro18x_K_F4 73.637 39.559 431660 301730 450460 372720 644700 452870 439530 571830 508070 221680 221270 145910 200860 133520 284270 120110 252890 113970 398920 277010 458040 372020 646780 455170 457480 566020 501710 240720 239330 151530 209480 137690 284880 121150 241310 108820 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137720000 30927 3698 29056 58074;58075 46893 46893 1 9606 Homo sapiens 0.03965263900079208 YGCLAGVR Unmodified 894.43817 0.43817159 617 Q9P258;A0A024RAC5;A5PLK7 RCC2 Protein RCC2 yes no 0 0 0 1.5 0.5 1 1 42.392 42.432 2 0.0055814 11144 20230619_1880_Aki_TMTPro18x_K_F1 113.08 88.264 882210 815380 730770 690830 1041500 1233700 900910 949090 1350000 239120 260620 277940 273130 237280 407910 287610 354540 276800 815250 745410 759450 715660 1055500 1199900 929470 969780 1302900 283320 319580 279700 285390 248690 408760 288030 339200 263310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 363380000 30928 617 29057 58076;58077 46894;46895 46894 2 9606 Homo sapiens -0.013269973229284915 YGDAFIR Unmodified 840.413 0.41300269 3717 P62312 LSM6 U6 snRNA-associated Sm-like protein LSm6 yes yes 0 0 0 6 0.816 1 1 1 46.503 46.585 2 0.029188 12348 20230619_1886_Aki_TMTPro18x_K_F6 95.62 48.854 420010 333310 364010 411240 380000 423650 415050 401530 504030 530080 550900 571340 626660 523440 458640 609760 680190 711590 387870 305840 374950 409040 394680 427000 419240 415270 510550 530120 566250 576480 629320 546320 482380 616570 648880 674670 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 432770000 30929 3717 29058 58078;58079;58080 46896 46896 1 9606 Homo sapiens -0.013587288538701614 YGDFFIR Unmodified 916.4443 0.44430282 2176 B4DQF6;B0QY89;Q9Y262-2;Q9Y262;B3KPB9;B0QY90;B3KNG0;Q7Z5X3;Q8N7H0;H0Y7E6 EIF3L Eukaryotic translation initiation factor 3 subunit L yes no 0 0 0 4.5 3.5 1 1 56.741 56.769 2 0.019978 16437 20230619_1888_Aki_TMTPro18x_K_F8 105.2 60.227 312730 269320 303720 323340 253520 317860 317960 329620 340720 369230 364920 372330 369680 333070 376030 412660 376290 422860 289200 246980 308690 322100 269340 322050 317720 337000 346930 371030 373620 376540 377550 349020 382500 413870 360350 401360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 184780000 30930 2176 29059 58081;58082 46897;46898 46898 2 9606 Homo sapiens -0.017261558197674276 YGDFRADDADEFGYSR Unmodified 1882.7758 0.77582031 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 1 2 0.816 1 1 1 49.937 49.982 3 4.4445E-19 14431 20230619_1881_Aki_TMTPro18x_K_F2 198.51 195.66 69887 71230 72446 65638 77637 63215 69538 79513 69522 90007 78874 63009 81179 57994 79835 98219 84642 70085 64741 65137 73378 66819 79815 64602 70656 80328 71341 89508 80494 65113 82642 62149 81570 96422 80838 66918 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 117710000 30931 1229 29060 58083;58084;58085 46899 46899 1 9606 Homo sapiens -0.13025656894183157 YGDGGSTFQSTTGHCVHMR Oxidation (M) 2112.8742 0.87417092 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;H0YB39;D6RIT2;Q68DG4;H0YBD7;H0YBG7;B4DP51 HNRNPH1;DKFZp686A15170 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 1 0 6.5 0.5 1 1 33.085 33.149 4 0.0037938 6953 20230619_1886_Aki_TMTPro18x_K_F6 69.975 69.959 19357 13246 14464 15152 22400 21266 19434 19807 13958 15867 17130 15544 16489 12730 16180 13567 15309 15943 17843 12153 15219 15229 22529 21016 19601 20223 14673 16226 17394 15703 16820 13280 16396 13763 14661 15115 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54387000 30932 1427 29061 58086;58087 46900 46900 904 1 9606 Homo sapiens -0.13775119912270384 YGDGGSTFQSTTGHCVHMR Unmodified 2096.8793 0.8792563 1427 P31943;G8JLB6;A0A384MEJ3;E9PCY7;H0YB39;D6RIT2;Q68DG4;H0YBD7;H0YBG7;B4DP51 HNRNPH1;DKFZp686A15170 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 0 0 7.5 0.5 1 1 36.663 36.69 4 5.2394E-31 7966 20230619_1887_Aki_TMTPro18x_K_F7 226.74 218.65 13499 12205 17014 19888 17813 18762 17083 16701 13253 20819 17834 17736 19701 13105 16270 15411 23307 24061 12517 11230 17018 19422 18390 19005 17161 17321 13945 20706 18164 17971 19865 13831 16987 15933 22237 22759 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70772000 30933 1427 29061 58088;58089 46901 46901 1 9606 Homo sapiens -0.1253081604968429 YGDGPRPPK Unmodified 985.49813 0.49812931 3811 Q08211;B3KU66;Q08211-2 DHX9 ATP-dependent RNA helicase A yes no 0 0 1 7.5 0.5 1 1 35.867 35.897 3 0.043607 7530 20230619_1887_Aki_TMTPro18x_K_F7 56.729 40.505 98574 68901 91476 99441 123340 123230 111540 112490 147710 134360 149720 133820 149480 116980 117900 131390 159750 131350 91012 63363 94026 98184 125250 122570 114250 116210 148490 134640 153350 135340 151030 122040 122810 131780 152250 124860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 920150000 30934 3811 29062 58090;58091 46902;46903 46902 2 9606 Homo sapiens 0.004800166119366622 YGDINFDDLNSEQSYNK Unmodified 2020.865 0.86502925 4006 Q53RX3;Q9HBH5;C9J2C7 RDH14;NT5C1B-RDH14 Retinol dehydrogenase 14 yes no 0 0 0 4.5 0.5 1 1 58.941 58.97 3 4.9057000000000005E-24 17892 20230619_1883_Aki_TMTPro18x_K_F4 176.08 167.22 87421 67177 74070 85042 80020 90305 86693 93398 107070 107410 109090 118070 136400 118340 100960 156960 134910 143370 80703 61665 76511 84480 82905 90982 87673 95558 108050 108140 113050 119460 136710 124070 105470 156180 128810 136280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 78540000 30935 4006 29063 58092;58093 46904;46905 46904 2 9606 Homo sapiens -0.10456866725326108 YGDLANWMIPGK Unmodified 1363.6595 0.65945733 76 A0A024R040;P55809;Q6IAV5;E9PDW2;B7Z609;P55809-2;Q9H7N8;B3KS89;Q9BYC2 OXCT1;OXCT;FLJ00030;OXCT2 Succinyl-CoA:3-ketoacid-coenzyme A transferase;Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid coenzyme A transferase 2, mitochondrial yes no 0 0 0 2 0 1 63.094 63.103 3 0.033955 20031 20230619_1881_Aki_TMTPro18x_K_F2 49.423 36.656 51487 49802 59173 67656 52629 54958 71507 73468 62889 71994 65778 65980 79262 69870 75345 77494 82803 85764 47722 45712 59432 66695 55600 56959 70759 73740 64733 72616 67971 67401 80304 72365 77106 78210 79174 81361 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 88590000 30936 76 29064 58094 46906 46906 1 9606 Homo sapiens -0.007826021371329261 YGDSEFTVQSTTGHCVHMR Oxidation (M) 2226.9423 0.94225048 470 A0A024R7T3;P52597;B4DKS8 HNRPF;HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 1 0 5 0 1 37.428 37.52 4 0.062249 8520 20230619_1885_Aki_TMTPro18x_K_F5 45.157 41.189 20309 15078 17536 20215 24757 23953 21470 22515 26315 22781 21617 26456 24319 20754 19901 25035 34541 22329 18747 13851 18164 20035 25043 23910 21985 23105 26353 23125 22548 26481 24547 21813 21144 24926 32823 21282 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32805000 30937 470 29065 58095 46907 46907 289 1 9606 Homo sapiens -0.12214295052308444 YGDSGEQIAGFVK Unmodified 1369.6514 0.65139506 1666 A0A7I2V4K5;B4E324;X6R5C5;Q59EV6;X6R8A1;P10619-2;P10619 CTSA;PPGB Carboxypeptidase;Lysosomal protective protein;Lysosomal protective protein 32 kDa chain;Lysosomal protective protein 20 kDa chain yes no 0 0 0 5.33 0.471 2 1 54.955 55.027 2;3 1.7923E-06 16021 20230619_1886_Aki_TMTPro18x_K_F6 138.89 125.91 63203 53875 65999 70640 77589 86664 83372 82378 102920 81082 79657 74147 90352 65740 67854 88339 70654 72748 58479 49453 67025 70160 79853 86304 84300 84402 102770 81851 83225 75347 90732 69319 69665 87481 67589 69254 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 202040000 30938 1666 29066 58096;58097;58098 46908;46909 46909 2 9606 Homo sapiens -0.0186445785293472 YGDSLYR Unmodified 872.40283 0.40283194 2806 Q8N4P8;Q53GS0;D2CFK9;Q9BZE4;Q9BZE4-2;B4DHR2;Q9BZE4-3;O60747;Q5T3R7 GTPBP4 Nucleolar GTP-binding protein 1 yes no 0 0 0 4.5 0.5 1 1 41.044 41.109 2 0.0047915 9993 20230619_1885_Aki_TMTPro18x_K_F5 145.88 86.241 193820 150860 181870 199970 202760 240470 200240 221560 239960 202100 185230 175020 218190 174860 187770 236910 215330 193570 179070 138540 186180 198390 209110 239570 203310 227040 240040 204560 193990 179060 220180 183670 193260 234510 205610 184390 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 232150000 30939 2806 29067 58099;58100 46910 46910 1 9606 Homo sapiens -0.03847336579099192 YGDVPCLDQTR Unmodified 1322.5925 0.59249998 3586 P43378;Q6IQ43 PTPN9 Tyrosine-protein phosphatase non-receptor type 9;Protein-tyrosine-phosphatase yes no 0 0 0 4 0 1 47.394 47.436 2 0.0019798 12828 20230619_1883_Aki_TMTPro18x_K_F4 118.91 109.59 53935 46745 58263 57690 61620 61517 61875 60845 65370 66772 75945 68179 66856 58821 70748 68048 72906 72621 49924 42878 58863 57424 63677 61923 62506 62369 66819 67198 76986 68860 68713 61473 71978 68503 69733 68929 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99515000 30940 3586 29068 58101 46911 46911 1 9606 Homo sapiens -0.05589257418910165 YGEAGEGPGWGGAHPR Unmodified 1596.707 0.70695288 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A1U9X9C1;B4DT32;A0A140T954;A2ABF4;A0A0G2JJT9 VARS Valine--tRNA ligase yes no 0 0 0 4 0.816 1 1 1 38.375 38.438 3 3.5711999999999997E-65 8873 20230619_1883_Aki_TMTPro18x_K_F4 337.85 318.64 139090 112840 145310 142260 167760 166570 164480 178060 179930 180410 191100 200050 205690 176160 192900 189240 211810 199270 128660 103560 147390 141610 172220 166890 166580 181100 182940 182760 196260 201350 208870 183200 197390 190560 202390 189210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 800000000 30941 725 29069 58102;58103;58104 46912;46913;46914 46913 3 9606 Homo sapiens -0.06753231612583477 YGEGDSLTLQQLK Unmodified 1450.7304 0.73037367 1115 E5RFZ8;E5RGA7;E5RJ40;E5RJG5;E5RIP4;A0A0S2Z5C8;A0A0S2Z5B1;A0A0S2Z5Z7;A0A0S2Z534;Q15043-2;Q15043-3;Q15043 SLC39A14 Zinc transporter ZIP14 yes no 0 0 0 5.5 0.5 1 1 55.905 55.974 3 7.5694E-08 16441 20230619_1886_Aki_TMTPro18x_K_F6 151.1 126.8 71999 49566 59905 79385 54354 92605 72995 68281 104510 76957 76663 66073 84694 61440 81195 89214 96056 98772 66417 45643 61939 77796 57745 91952 73449 71694 103480 77078 80247 67486 85981 65085 83489 89698 91781 93703 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 237020000 30942 1115 29070 58105;58106 46915 46915 1 9606 Homo sapiens 0.023037693813876103 YGEGHQAWIIGIVEK Unmodified 1698.873 0.87295558 3614 P49903-2;P49903;B4DLS1;P49903-3 SEPHS1 Selenide, water dikinase 1 yes no 0 0 0 7.5 0.5 1 1 58.94 58.986 3 0.00093526 17408 20230619_1887_Aki_TMTPro18x_K_F7 75.463 58.244 75198 68063 62995 81256 67242 89692 95959 81080 102250 103060 80573 100120 88821 71911 123600 117560 110730 120600 69486 62404 65226 81062 70417 89830 95198 84057 103010 102880 84282 100760 92034 77553 124330 117570 106140 114480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 136270000 30943 3614 29071 58107;58108 46916;46917 46916 2 9606 Homo sapiens 0.051474018433964375 YGEIPAELR Unmodified 1046.5397 0.53965977 2867;2868 E5KND5;Q96RP9;Q96RP9-2;C9IZ01;D3DNL3;F8WAU4;A0A0S2Z5W5;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 0 4 0 1 49.741 49.775 2 0.055919 13911 20230619_1883_Aki_TMTPro18x_K_F4 66.27 41.419 102070 82972 100790 106190 113540 120920 117980 117690 133400 129600 141660 142570 138030 118950 134160 168920 144030 154180 94368 76156 102720 105520 117020 121090 119190 120770 135350 130730 144810 143430 140820 126080 137240 168010 137780 146560 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 211700000 30944 2867;2868 29072 58109 46918 46918 1 9606 Homo sapiens 0.01825152580613576 YGEMPVDK Unmodified 937.42152 0.42151847 963 V9HWF0;A0A0A0MTH3;Q13418 HEL-S-28;ILK Integrin-linked protein kinase yes no 0 0 0 4 0 1 46.533 46.576 2 0.057645 12432 20230619_1883_Aki_TMTPro18x_K_F4 69.954 38.582 49230 40247 48105 52904 54346 51508 56885 57642 65186 72806 75185 67736 74488 57170 61354 72074 74125 64245 45513 36950 49074 52370 55963 52353 57477 58862 66377 72587 76570 68652 75381 60132 63380 71725 70730 61139 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28431000 30945 963 29073 58110 46919 46919 1 9606 Homo sapiens -0.04969542999549503 YGEPGEVFINK Unmodified 1251.6136 0.61355299 1450 A0A384N5Z8;A0A8Q3WMA7;P23246;Q9BSV4;Q86VG2;P23246-2;Q6PIX2 SFPQ Splicing factor, proline- and glutamine-rich yes no 0 0 0 4.5 0.5 2 2 54.502 54.543 2;3 1.4057E-06 15594 20230619_1885_Aki_TMTPro18x_K_F5 158.79 120.49 454530 351620 391390 433770 384020 427180 453490 428660 478600 521490 491760 433850 502600 442660 435590 537290 485920 505720 419660 322670 403000 431240 401480 432550 454020 440370 486980 519380 503980 444940 509540 461330 447470 536360 464570 480600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4496100000 30946 1450 29074 58111;58112;58113;58114 46920;46921;46922 46921 3 9606 Homo sapiens -0.0021892404770369467 YGEPSEVFINR Unmodified 1309.6303 0.63026569 2614 B4DWI8;Q8WXF1;A0A024RDP4;Q8WXF1-2;X6RDA4 PSPC1 Paraspeckle component 1 yes no 0 0 0 4.5 0.5 1 1 50.108 50.163 2 7.8083E-12 14032 20230619_1883_Aki_TMTPro18x_K_F4 199.46 174.53 225620 185240 196790 244620 226110 259910 224800 212820 244260 297220 291080 297570 310940 262770 278140 319660 291060 320420 208410 170070 203030 242220 232670 260560 227370 223010 249930 295820 297350 300840 315110 275230 284370 320240 278570 304220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 780120000 30947 2614 29075 58115;58116 46923;46924 46923 2 9606 Homo sapiens -0.012164231617589394 YGEYEWVHKPR Unmodified 1462.6993 0.69934831 4539 Q9H9Y2 RPF1 Ribosome production factor 1 yes yes 0 0 1 8 0 1 44.065 44.084 4 3.32E-06 11113 20230619_1888_Aki_TMTPro18x_K_F8 127.83 108.73 65983 62164 76421 76578 63929 84618 78194 77766 84588 78219 56114 62326 69625 44837 71691 69637 59486 46459 61150 57005 76596 76264 67854 84763 78223 79929 84727 78540 59578 63359 70630 48180 72173 68301 56943 44421 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57923000 30948 4539 29076 58117 46925 46925 1 9606 Homo sapiens -0.013493391422343848 YGEYFPGTGDLR Unmodified 1373.6252 0.62518031 4305;2659 Q6IT96;B5BU61;Q13547;Q5TEE2;B4DSK9;B7Z3S4;B4DRG0;Q92769;Q92769-3;B3KUJ5 HDAC1;HDAC2 Histone deacetylase;Histone deacetylase 1;Histone deacetylase 2 no no 0 0 0 5 0.816 1 1 1 54.535 54.589 2 1.1174E-09 15637 20230619_1885_Aki_TMTPro18x_K_F5 224.09 183.37 446330 374450 430430 483780 388810 488540 453510 451110 464160 606950 592950 563030 691610 549540 535330 699400 642200 625530 412650 343680 438330 479550 409330 492660 454110 467660 478130 603530 606290 573340 695040 575370 553900 695820 613310 594970 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1443400000 30949 2659;4305 29077 58118;58119;58120 46926;46927;46928 46927 3 9606 Homo sapiens -0.04668727024363761 YGFEPTQEGK Unmodified 1154.5244 0.52440364 4209 Q8IXM3 MRPL41 39S ribosomal protein L41, mitochondrial yes yes 0 0 0 4.33 0.471 2 1 46.964 47.018 2;3 1.4842E-06 12629 20230619_1883_Aki_TMTPro18x_K_F4 172.59 151.09 126690 110420 125240 140490 127610 167520 166510 152510 177610 164550 171580 167420 181690 149010 160420 191920 180440 174800 117180 101310 127540 139730 133600 166920 165920 157190 180030 165780 176740 169280 184080 156580 164780 191120 172410 166230 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 235410000 30950 4209 29078 58121;58122;58123 46929;46930 46929 2 9606 Homo sapiens -0.046677590072249586 YGFGEAGKPK Unmodified 1052.5291 0.52909508 3853 Q53GX4;Q2TA84;Q13451;B7Z8G2;B7Z7Z8 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes no 0 0 1 1.5 0.5 1 1 43.839 43.881 3 0.00044174 11810 20230619_1880_Aki_TMTPro18x_K_F1 108.7 89.426 365850 275700 329240 384240 377130 391930 395950 389220 409130 459150 499750 494030 492990 397750 425030 481410 513430 459100 337840 253360 338530 379090 388290 395680 398630 399750 419890 461170 508100 496670 500000 417930 438570 481070 490020 436490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 488300000 30951 3853 29079 58124;58125 46931 46931 1 9606 Homo sapiens 0.0049316992619878874 YGFIDLSR Unmodified 969.49198 0.4919813 1373 A0A2R8YF65;Q86TI2-4;Q86TI2;A0A8V8TR99;Q86TI2-2 DPP9 Dipeptidyl peptidase 9 yes no 0 0 0 8 0 1 56.013 56.075 2 0.03175 16197 20230619_1888_Aki_TMTPro18x_K_F8 86.794 49.066 52738 44979 45111 53790 48314 56500 55473 49003 63155 67738 60526 52421 67890 59354 58763 80501 69604 69470 48720 41248 46567 53623 50173 56760 55736 51098 63850 67011 62489 54203 68648 62110 60635 79871 66491 66100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35449000 30952 1373 29080 58126 46932 46932 1 9606 Homo sapiens 0.006014983804334406 YGFIEGHVVIPR Unmodified 1385.7456 0.74557022 1496 P16070;P16070-11;H0YD13;B4DN59;A8K309;A0A385KNS5;P16070-7;P16070-12;P16070-14;P16070-13;P16070-8;P16070-10;P16070-17;P16070-3;P16070-16;P16070-6;P16070-4;P16070-18;P16070-5;H0Y2P0;A0A1Z1VXF2;P16070-15;P16070-9;H0Y5E4;H0YDW7;H0YCV9;H0YDX6;H0YD17;C1PHC4 CD44 CD44 antigen yes no 0 0 0 1.5 0.5 1 1 52.412 52.431 3 2.9297E-08 15344 20230619_1880_Aki_TMTPro18x_K_F1 168.94 149.2 222700 173700 178180 190490 184740 215890 184720 193610 270070 201550 213290 219280 219620 193140 208930 224410 227670 226710 205520 159220 184870 191380 191760 215900 188900 199540 267840 203980 221810 220930 223520 201710 213760 225110 217650 215310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 424350000 30953 1496 29081 58127;58128 46933;46934 46933 2 9606 Homo sapiens 0.06812725759891691 YGFNEGHSFR Unmodified 1212.5312 0.53122035 2887 E5RIZ4;Q9P015;B2R739;E5RHF4 MRPL15 39S ribosomal protein L15, mitochondrial yes no 0 0 0 6.5 0.5 1 1 39.504 39.581 3 4.022E-14 9054 20230619_1887_Aki_TMTPro18x_K_F7 187.1 150.72 76421 59179 65855 73683 78789 85479 83100 85185 87761 82039 93376 87838 101130 76380 83560 90873 96364 92024 70560 54312 68021 73373 80938 85534 83689 86948 89356 83255 95831 88564 102070 79978 86021 91135 92047 87409 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 328440000 30954 2887 29082 58129;58130 46935 46935 1 9606 Homo sapiens -0.06654401336004412 YGFQIADCAYR Unmodified 1362.6027 0.60267073 1254 A0A146E5L3;O14498;H0YN67;H0YL90 ISLR Immunoglobulin superfamily containing leucine-rich repeat protein yes no 0 0 0 8 0 1 53.356 53.431 2 0.00016469 15022 20230619_1888_Aki_TMTPro18x_K_F8 121.6 114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30955 1254 29083 58131 46936 46936 1 9606 Homo sapiens -0.06412649693675121 YGGDEIPFSPYR Unmodified 1399.6408 0.64083038 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 0 0 5.5 0.5 1 1 55.761 55.832 2 0.023276 16321 20230619_1886_Aki_TMTPro18x_K_F6 69.65 20.161 367650 327120 342840 401470 373300 439030 413860 397780 429800 466120 428680 380750 457500 344190 441720 415400 351890 356240 339950 300020 351210 399740 386640 440110 415420 411070 437260 464780 440900 389200 464790 360220 444350 413140 337590 338970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 244820000 30956 3484 29084 58132;58133 46937;46938 46938 2 9606 Homo sapiens -0.04300440507336134 YGGDPQNPHK Unmodified 1111.5047 0.50467125 2721 B8ZZV5;Q8TCC3-3;Q8TCC3;Q8TCC3-2 MRPL30 39S ribosomal protein L30, mitochondrial yes no 0 0 0 4.5 0.5 1 1 33.622 33.692 3 0.0014862 7038 20230619_1885_Aki_TMTPro18x_K_F5 75.387 48.272 22754 13807 32339 34819 51297 55940 36373 47988 41546 28533 44751 51431 40726 36686 46487 19117 41474 37995 21080 12817 32352 33660 51357 54727 37734 49014 42112 30582 45647 50623 41965 37398 46736 20651 39707 35900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35059000 30957 2721 29085 58134;58135 46939 46939 1 9606 Homo sapiens -0.04662090227338922 YGGEAQMR Unmodified 910.3967 0.3967007 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 4 0 1 34.004 34.058 2 0.0018118 7154 20230619_1883_Aki_TMTPro18x_K_F4 113.14 94.405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30958 81 29086 58136 46940 46940 1 9606 Homo sapiens -0.06208178082260929 YGGELVPHFPAR Unmodified 1341.683 0.68296996 3299 O75369-8;O75369-2;O75369-9;O75369;A0A804HK76;A0A024R321;O75369-6;O75369-3;A0A804HL72;O75369-4;O75369-5;O75369-7;E7EN95;Q68CT4 FLNB;DKFZp686A1668 Filamin-B yes no 0 0 0 1 0 1 49.392 49.392 3 0.00018416 14058 20230619_1880_Aki_TMTPro18x_K_F1 80.245 58.994 63419 46192 53965 57026 49148 59882 63972 70690 72021 74091 70673 69098 79836 76079 68303 93808 75046 81136 58529 42400 55564 56758 51901 60566 63912 71525 72889 74540 72962 70665 80704 79134 70177 93202 71780 77175 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 25979000 30959 3299 29087 58137 46941;46942 46941 2 9606 Homo sapiens 0.025795796917009284 YGGGGYGR Unmodified 785.34565 0.34565141 539 J3KP15;Q53FN0;A0A024R8U5;Q01130;B3KUY1 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 yes no 0 0 0 6.5 1.12 1 1 1 1 32.589 32.641 2 0.0023793 6571 20230619_1888_Aki_TMTPro18x_K_F8 127.66 98.792 138830 62365 180160 186380 264080 290500 198150 253250 209810 134210 234140 262820 199030 206040 239530 72242 269380 235360 128320 58212 180860 179100 265770 284670 204170 257940 213710 145990 237840 258790 206420 207320 243530 84471 257220 221940 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 368280000 30960 539 29088 58138;58139;58140;58141 46943;46944;46945 46945 3 9606 Homo sapiens -0.05560759064803733 YGGISTASVDFEQPTR Unmodified 1726.8162 0.81622856 1108 A0A0S2Z4W4;Q7Z3D7;P98175-2;P98175;P98175-5;A0A0S2Z4X1;P98175-4;P98175-3 DKFZp686E2459;RBM10 RNA-binding protein 10 yes no 0 0 0 5 0 1 52.912 52.984 3 1.9068E-14 15059 20230619_1885_Aki_TMTPro18x_K_F5 137.21 124.58 31646 26369 28614 29603 33434 30619 31338 32898 39725 36008 35635 36338 40306 34648 33973 39648 33620 37960 29242 24169 29387 29658 34262 30964 31983 33529 39840 36243 36958 36820 40687 36058 34672 39655 32201 36056 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97852000 30961 1108 29089 58142 46946 46946 1 9606 Homo sapiens -0.018106905037939214 YGGMFAAVEGAYENK Unmodified 1605.7133 0.71334339 3880 X5DQV1;X5DNI1;Q14194-2 CRMP1 Dihydropyrimidinase-related protein 1 yes no 0 0 0 7 0 1 62.415 62.45 3 9.9662E-06 18912 20230619_1887_Aki_TMTPro18x_K_F7 113.34 99.375 178880 129130 166060 139850 78288 95876 119100 112520 131120 209950 211040 185560 203760 153360 162180 223850 226320 226500 165190 118390 168250 139940 89481 100750 118310 116470 136340 206040 212210 188460 206100 163120 169530 223750 215930 215110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 214570000 30962 3880 29090 58143 46947 46947 1 9606 Homo sapiens -0.06528474496053605 YGGMFCNVEGAFESK Unmodified 1694.7069 0.70687781 1217 Q6DEN2;A0A140VK07;Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 6.5 0.5 1 1 62.047 62.09 3 1.1949E-07 18733 20230619_1887_Aki_TMTPro18x_K_F7 127.36 120.67 133130 138280 149640 131060 108060 121440 109220 118690 142450 196110 145600 109230 184320 116770 106100 210080 166920 170830 123440 126470 149860 132990 115600 123600 111250 123450 143750 191330 150560 115250 182960 125360 113210 207050 159150 162660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 399180000 30963 1217 29091 58144;58145 46948 46948 1 9606 Homo sapiens -0.11268735719113465 YGGPPPDSVYSGQQPSVGTEIFVGK Unmodified 2565.2387 0.23873331 2265;1680 A0A7I2YQN2;O60506-3;Q05CK9;Q59GL1;A0A7I2V4Z0;O60506-4;B7Z645;A0A7I2V5Q6;F6UXX1;B2R8Z8;O60506;O60506-2;A0A7I2V309;A0A7I2V2F2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 7.5 0.5 1 1 61.368 61.402 3 1.2618E-19 18346 20230619_1888_Aki_TMTPro18x_K_F8 146.72 133.78 235970 203920 223420 242160 183190 211610 219180 232500 212540 286270 270690 301400 311480 279180 261420 361530 315390 391580 218180 186980 227500 241080 194470 216810 218910 237550 219600 286710 276980 304540 314360 293060 270280 363310 301770 371330 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1193900000 30964 1680;2265 29092 58146;58147 46949;46950;46951 46950 3 9606 Homo sapiens 0.018723489278727357 YGGPPPDSVYSGVQPGIGTEVFVGK Unmodified 2506.238 0.23800503 3254 O43390;O43390-2;Q0VGD6;Q6MZS5;O43390-4;A0A6Q8PEX7 HNRNPR;HNRPR;DKFZp686A13234 Heterogeneous nuclear ribonucleoprotein R yes no 0 0 0 7.5 0.5 1 1 62.089 62.121 4 2.5936E-09 18675 20230619_1888_Aki_TMTPro18x_K_F8 119.01 107.71 277480 221390 297670 302730 228970 262940 269920 317880 255960 330610 388000 392580 395380 364880 406860 398000 356410 464020 256690 203360 299680 298570 244300 270090 269780 321250 267010 335060 392340 394890 403870 379000 410740 403160 342250 439640 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1906999999.9999998 30965 3254 29093 58148;58149 46952;46953 46953 2 9606 Homo sapiens 0.04513554278810261 YGGPYHIGGSPFK Unmodified 1378.667 0.66698555 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4;Q8TES4;Q6NXF2;Q96C61;B4E2F9;Q86TQ3 FLNA;FLJ00119 Filamin-A yes no 0 0 0 3 0 1 49.593 49.671 3 0.060941 13986 20230619_1882_Aki_TMTPro18x_K_F3 42.466 31.879 216830 187800 238350 219260 230180 299490 256710 278900 305740 190700 168300 170710 178460 146250 209180 176690 201080 199510 200730 172180 240160 219990 240810 296140 258830 283840 302920 197040 179710 173420 183310 153380 211530 178450 192460 189260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 324590000 30966 3484 29094 58150 46954 46954 1 9606 Homo sapiens -0.007201265452067673 YGGQPLFSEK Unmodified 1124.5502 0.55022446 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 0 7.5 0.5 1 1 51.751 51.826 3 0.0016102 14298 20230619_1888_Aki_TMTPro18x_K_F8 88.681 71.245 138920 115180 135360 144050 139650 191120 161930 153700 214540 158330 162870 142340 157950 144100 148980 159900 133640 142110 128440 105690 137980 143680 145700 188720 163540 159720 213330 159470 169170 145370 160990 149370 150870 159430 128070 135130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 134510000 30967 3957 29095 58151;58152 46955;46956 46956 2 9606 Homo sapiens -0.007068647649703053 YGGQPVPNFPSK Unmodified 1289.6404 0.64043645 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4 FLNA;FLJ00119 Filamin-A yes no 0 0 0 2 0 1 51.529 51.574 2 0.054699 15120 20230619_1881_Aki_TMTPro18x_K_F2 77.662 66.511 13766 16269 15913 17780 24536 34664 23767 22801 37958 22448 26164 25588 25855 21341 29281 23603 26205 32532 12780 14892 16142 18042 24864 33479 24420 24092 37341 22849 27386 25693 26557 22291 29515 24198 25146 30781 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13851000 30968 3484 29096 58153 46957 46957 1 9606 Homo sapiens 0.0072018456346540916 YGIENVK Unmodified 821.42832 0.42831841 3371 V9HW90;P00390-2;P00390-3;P00390;P00390-5;P00390-4 HEL-75;GSR Glutathione reductase, mitochondrial yes no 0 0 0 6.5 0.5 1 1 46.211 46.296 2 0.020718 11868 20230619_1887_Aki_TMTPro18x_K_F7 104.21 57.643 605340 462720 492160 530870 686060 779360 669320 659050 818100 709690 799200 703240 799700 610980 514290 849650 937710 755680 558650 424350 512600 533760 697500 766450 680210 682690 823950 714670 819730 711800 802590 646100 553140 843680 891840 719410 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 436350000 30969 3371 29097 58154;58155 46958;46959 46959 2 9606 Homo sapiens 0.010461379433422735 YGIFQYDGPL Unmodified 1171.555 0.55497548 2567 B4DPT6;F5GZY1;Q9H993 ARMT1 Protein-glutamate O-methyltransferase yes no 0 0 0 6.5 0.5 1 1 65.388 65.424 2 0.0018764 20287 20230619_1887_Aki_TMTPro18x_K_F7 100.45 87.824 36991 30357 35674 40488 31253 41335 39270 32363 40856 44222 47919 42752 52244 44623 40816 52196 46278 56048 34195 27874 36321 40048 33080 41510 39178 34032 41826 44029 48976 43562 52638 46381 42074 52510 44293 53158 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99519000 30970 2567 29098 58156;58157 46960;46961 46961 2 9606 Homo sapiens -0.023939806221733306 YGINNIR Unmodified 848.45045 0.45045083 4109 Q6IBR2;Q9Y285;K7ER00;Q9Y285-2 FARSLA;FARSA Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 4.5 3.5 1 1 41.221 41.219 2 0.021408 10589 20230619_1880_Aki_TMTPro18x_K_F1 103.28 46.774 208450 176290 195770 213500 231850 245110 241530 239620 263870 212320 237490 227740 236990 198630 244490 229900 258500 223600 192700 161690 200580 212980 238170 245360 243630 244450 266340 216590 244890 229600 242250 207500 249150 230250 246950 212570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 456390000 30971 4109 29099 58158;58159 46962;46963 46962 2 9606 Homo sapiens 0.020163624117572 YGIPYFETSAATGQNVEK Unmodified 1973.9371 0.93707198 3206 O00194 RAB27B Ras-related protein Rab-27B yes yes 0 0 0 6.5 0.5 1 1 59.741 59.795 3 1.0258E-09 17679 20230619_1887_Aki_TMTPro18x_K_F7 135.47 124.2 29175 26349 31022 38979 36398 35594 55855 45536 48401 36505 38377 28990 42913 26705 43265 36781 30139 27244 27009 24215 31507 38270 37820 36472 54900 45620 49281 37156 40004 29745 43586 28193 43227 36291 28943 25989 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70837000 30972 3206 29100 58160;58161 46964 46964 1 9606 Homo sapiens -0.010939075809574206 YGIQADAK Unmodified 864.43413 0.43413207 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;G3V281;G3V5R2 FERMT2;PLEKHC1 Fermitin family homolog 2 yes no 0 0 0 5.5 0.5 1 1 42.785 42.873 2 0.0023852 10730 20230619_1885_Aki_TMTPro18x_K_F5 127.56 81.139 104160 62306 110540 111910 143070 158200 132780 128240 153980 133680 167630 150460 169790 123180 139800 104360 193040 153890 96204 57505 112270 109440 145760 155680 135130 133210 156130 135380 171280 151030 171680 127140 145390 108080 183910 145780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 250090000 30973 385 29101 58162;58163 46965 46965 1 9606 Homo sapiens -0.003507635450091584 YGIQMPAFSK Unmodified 1140.5638 0.56376603 707 P46940;A4QPB0;A0A024RC65;A0A0J9YXZ5;Q6P1N4;Q05DN7;Q5FWG8 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 4 0 1 59.142 59.145 2 0.0010551 17969 20230619_1883_Aki_TMTPro18x_K_F4 123.35 95.186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30974 707 29102 58164 46966 46966 1 9606 Homo sapiens -0.0008933025735586853 YGISSMIQSQEKPDR Oxidation (M) 1753.8305 0.83049842 1207 A0A140VJW5;P14868;Q53R85 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 1 1 7 0.816 1 1 1 42.829 42.868 3 4.15E-05 10409 20230619_1887_Aki_TMTPro18x_K_F7 101.72 86.568 106860 81130 99187 103170 107660 95491 117930 107860 104360 134010 139460 122240 124180 98622 139470 116100 106900 106960 98710 74479 101520 102300 111200 97500 117920 110070 108600 133580 140710 123830 127830 103470 139630 115970 102600 101690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159400000 30975 1207 29103 58165;58166;58167 46967;46968 46968 742 2 9606 Homo sapiens -0.016263613471437566 YGISSMIQSQEKPDR Unmodified 1737.8356 0.83558379 1207 A0A140VJW5;P14868;Q53R85 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 1 8 0 1 49.338 49.411 3 3.9187000000000005E-25 13268 20230619_1888_Aki_TMTPro18x_K_F8 226.65 203.32 687000 603480 668830 700620 635080 695240 718920 714850 753450 885430 845100 829700 1003700 812050 836380 1046000 924770 980710 635400 553210 680600 699730 664490 704100 721360 733520 770170 883800 869560 844560 1011100 850810 859490 1043100 884350 931970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 594520000 30976 1207 29103 58168 46969;46970 46970 2 9606 Homo sapiens -0.0038205748451218824 YGIVDYMIEQSGPPSK Unmodified 1782.8498 0.84983687 909 A0A090N8Y2;P13667;A0A499FI48;C9JMN9 ERP70;PDIA4 Protein disulfide-isomerase A4 yes no 0 0 0 7.5 0.5 1 1 62.682 62.713 3 3.4362E-12 18941 20230619_1888_Aki_TMTPro18x_K_F8 168.67 150.31 391100 316320 380200 402710 399440 481460 465780 456160 502830 571790 599360 645280 686750 600670 635280 758130 661920 722640 361530 290320 387660 400610 415470 480170 466990 470830 514370 573840 614610 650370 695760 629220 649080 756980 633480 686520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1080300000 30977 909 29104 58169;58170 46971;46972 46972 2 9606 Homo sapiens -0.010274050562657067 YGLAAAVFTR Unmodified 1067.5764 0.57637963 1437 A0A384MTJ7;P30837;B4DLJ0 ALDH1B1 Aldehyde dehydrogenase X, mitochondrial yes no 0 0 0 5 0 1 57.243 57.302 2 0.0012325 16785 20230619_1885_Aki_TMTPro18x_K_F5 117.89 102.81 137590 121320 125420 141310 140160 163060 150390 158100 168580 107590 111370 87088 101050 86480 142070 107210 150460 100330 127190 111220 128750 141360 144800 163110 151590 160470 168230 110920 116450 89473 105470 90336 143990 107140 143530 95552 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67524000 30978 1437 29105 58171 46973 46973 1 9606 Homo sapiens 0.04529449197161739 YGLECLFR Unmodified 1056.5063 0.50625115 4130;1506 A0A994J4X5;A0A3B3ISF0;Q659C4-2;Q659C4;Q659C4-7;Q659C4-6;Q659C4-5;Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A8I5KSP1 LARP1B;LARP1 La-related protein 1B;La-related protein 1 no no 0 0 0 2 0 1 60.939 60.949 2 0.0076448 19013 20230619_1881_Aki_TMTPro18x_K_F2 108.09 74.967 99035 79937 86714 101930 74103 80573 84572 92687 97869 100390 96751 103390 111580 93114 92670 121840 110890 124670 91473 73368 88999 100850 78288 83385 85137 94081 98957 101110 100000 104490 112510 97925 95738 122040 106020 118330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135970000 30979 1506;4130 29106 58172 46974 46974 1 9606 Homo sapiens -0.019741724629511737 YGLFPANYVELR Unmodified 1440.7402 0.74015049 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;B3KRK4 CTTN Src substrate cortactin yes no 0 0 0 1.5 0.5 1 1 62.233 62.238 2 5.8929E-05 19613 20230619_1881_Aki_TMTPro18x_K_F2 127.93 97.242 172200 149760 179000 218020 165080 204100 191620 190430 211730 235300 236480 245450 254800 221260 242370 260420 254930 284360 159340 137620 181320 214250 173430 207030 192360 196770 215690 235670 242360 247870 258900 231130 247480 262360 244000 269720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174190000 30980 1413 29107 58173;58174 46975 46975 1 9606 Homo sapiens 0.037410021773894186 YGLNMCR Unmodified 912.39459 0.39459221 3711 P62273;A0A087WTT6;A0A2R8Y851;P62273-2;A0A2R8Y6P7 RPS29 40S ribosomal protein S29 yes no 0 0 0 1.5 0.5 1 1 42.328 42.367 2 0.044641 11143 20230619_1880_Aki_TMTPro18x_K_F1 96.048 59.461 206520 137100 166410 195200 237320 283310 218070 232460 328800 155480 195720 190520 181330 161230 181560 127730 219390 183850 190430 126090 173650 193370 240870 278470 224260 238870 322770 162720 206390 190810 185680 165550 186380 132240 209300 174160 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 135520000 30981 3711 29108 58175;58176 46976 46976 1 9606 Homo sapiens -0.06510930091724276 YGLSAAAAAAAAAAAAVEQR Unmodified 1802.9275 0.92751034 4496 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like yes yes 0 0 0 3 0 1 63.739 63.77 3 3.321E-11 20018 20230619_1882_Aki_TMTPro18x_K_F3 125.23 107.31 26463 23656 33860 33374 29152 32715 37594 34150 40369 30832 32959 33199 36634 32314 31351 35534 37410 42204 24540 21728 33713 32896 30858 33154 37497 34718 40640 31430 34328 33577 37039 33539 32331 36016 35768 39998 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33473000 30982 4496 29109 58177 46977 46977 1 9606 Homo sapiens 0.05816368924160997 YGMGTSVER Oxidation (M) 1014.444 0.44404482 699 P08559-4;P08559-2;P08559;Q5JPU2;P08559-3;A0A024RBX9;Q53GE3;A5YPB6;A5PHJ9 PDHA1;PDHA1/LOC79064 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha yes no 0 1 0 3 0.816 1 1 1 32.432 32.495 2 0.0042565 6575 20230619_1882_Aki_TMTPro18x_K_F3 93.143 69.715 63553 45499 60885 70235 67441 72657 78803 73296 81790 74409 90285 102770 87343 79688 83525 96103 110130 103230 58699 41872 62234 68891 69814 73275 78877 74905 83444 75998 92198 102250 89121 83789 86534 96674 105070 98000 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84842000 30983 699 29110 58178;58179;58180 46978;46979 46978 425 2 9606 Homo sapiens -0.0625994360191271 YGMHQNTLR Oxidation (M) 1134.524 0.52402648 2409 B3KT11;C9JA08;Q96D46;B3KMN5;C9J0B9 NMD3 60S ribosomal export protein NMD3 yes no 0 1 0 8 0 1 27.971 28.001 3 0.028645 4930 20230619_1888_Aki_TMTPro18x_K_F8 53.751 44.318 6302.5 3599 3465.7 4356 4571.3 7253.5 5840.6 5327 8542.6 4279 4783.6 3890.9 5573.6 4885.7 3868.9 3775.5 5924.9 4342.9 5795 3306.7 3782.3 4372 4724.9 7063.5 5890.5 5546.1 8384.2 4382.3 5110.5 4004.4 5587 4949.4 4075.9 3845.4 5638.1 4124.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12958000 30984 2409 29111 58181 46980 46980 1489 1 9606 Homo sapiens -0.037854572080732396 YGMPPQDAFTTQWLVR Oxidation (M) 1924.9142 0.91416847 1005 A0A2R8YFK9;A0A2R8Y425;A0A2R8Y5J0;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;B3KY63;F5GWX5;Q14839-2;A0A2U3TZM0;Q14839;A0A2R8YFD8;A0A2R8YDJ9;A0A2R8YD40;A0A2R8YDW2;A0A2R8Y4X2;A0A2R8YER1;A0A2R8Y445;A0A2R8Y8C1;A0A2R8Y7I0;A0A2R8Y7M9;A0A2R8Y5M9;A0A2R8YE38 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 1 0 2 0 1 61.896 61.906 3 0.00018531 19453 20230619_1881_Aki_TMTPro18x_K_F2 88.311 81.894 32470 25378 34537 35967 43280 53313 48528 52126 74780 40098 49822 55553 43374 41132 57284 47114 50860 58249 30031 23323 35070 35670 44488 52528 49403 52987 73557 41702 52069 55203 45170 43205 57598 47905 48776 55180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100390000 30985 1005 29112 58182 46981 46981 572 1 9606 Homo sapiens -0.011292051794498548 YGMWHFLLGDK Oxidation (M) 1381.6489 0.64889264 846 O95299;E7ESZ7;A0A7I2V594;Q7Z518;A0A7I2V3H5;A0A087WXC5;A0A7I2V2X3;A0A7I2V2W9;A0A7I2V5B2;A0A7I2V5U7;A0A7I2V419;H7C2X4;A0A7I2V458;A0A7I2YQU0;Q53SW4;A0A7I2V438;A0A7I2V5L0;A0A7I2V2N6;Q59FM0;A0A7I2V2F6;A0A7I2V4N8;A0A7I2V327;H7C1Y7;O95299-2;A0A7I2V2J5;C9J6X0;A0A7I2V3D4;A0A7I2V2I6;Q8N1B9 NDUFA10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes no 0 1 0 3 0 1 59.067 59.096 3 0.001915 18196 20230619_1882_Aki_TMTPro18x_K_F3 76.332 62.669 29271 25989 30509 33577 36368 37419 32351 29958 37722 25942 29504 29381 33112 29103 34076 33436 31654 35092 27090 23849 30989 33324 37186 37382 33014 31033 37770 26573 30825 29683 33733 30256 34498 33627 30333 33300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26018000 30986 846 29113 58183 46982 46982 500 1 9606 Homo sapiens -0.026665847915865015 YGNANAWR Unmodified 950.43586 0.4358634 494 A0A024R861;O00743-2;O00743;O00743-3 PPP6C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 0 1 0 1 39.89 39.89 2 0.026324 10054 20230619_1880_Aki_TMTPro18x_K_F1 83.364 63.886 68717 56282 70753 71397 80409 94144 82903 84679 86314 59814 65745 63878 60979 55910 79788 54433 79224 63049 63557 51652 71864 71156 82850 93224 83550 86481 86835 61951 68255 64404 63322 57852 80620 55297 75694 59852 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36326000 30987 494 29114 58184 46983 46983 1 9606 Homo sapiens -0.04133709736390756 YGNPWEK Unmodified 892.40792 0.40791731 3432;1055;2254 B4DRW6;B2RB32;A0A0M4FEM1;P11217;P11217-2;B4DRQ4;Q6P1L4;Q59GM9;P11216;B4DSD8;E9PK47;B2R825;P06737-2;P06737 PYGM;PYGL;PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, muscle form;Glycogen phosphorylase, brain form;Glycogen phosphorylase, liver form no no 0 0 0 7.5 0.5 1 1 48.837 48.913 2 0.017133 13093 20230619_1888_Aki_TMTPro18x_K_F8 109.01 63.7 385800 356680 404160 414620 431580 501400 441650 441510 467730 574140 654570 652140 615630 554380 571680 657880 735530 678840 357170 326910 409540 415150 446500 499090 445790 458710 482810 575320 661060 655240 627760 580390 591590 660400 701780 644750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 234180000 30988 1055;3432;2254 29115 58185;58186 46984;46985 46985 2 9606 Homo sapiens -0.0425903271648167 YGNQLVR Unmodified 848.45045 0.45045083 1091 A0A0S2Z4A5;P33993;C6EMX8;B2RBA6;P33993-2;A0A0S2Z441 MCM7 DNA replication licensing factor MCM7;DNA helicase yes no 0 0 0 5.33 3.09 1 1 1 38.138 38.155 2 0.0080821 8732 20230619_1888_Aki_TMTPro18x_K_F8 121.14 57.496 637560 468390 539220 592590 625300 695090 630800 641380 784500 768540 836740 738010 802950 698480 659470 818930 894810 725730 588400 430030 557540 589520 643370 693850 640530 662210 792580 769150 853640 749670 814060 728000 686930 815430 852700 690910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 689410000 30989 1091 29116 58187;58188;58189 46986;46987 46987 2 9606 Homo sapiens 0.020163624117685686 YGNSSASGIEILAIER Unmodified 1678.8526 0.85261407 4600 Q9NUY8-2;Q9NUY8;B3KS68;E9PGE5 TBC1D23 TBC1 domain family member 23 yes no 0 0 0 6 0 1 58.14 58.209 2 0.012131 17382 20230619_1886_Aki_TMTPro18x_K_F6 92.952 65.128 27567 20132 25277 27544 23241 26254 21888 24807 28891 27513 31403 33515 30039 26473 32877 33936 30791 36568 25456 18499 25845 27184 24291 26609 22389 25520 29132 27842 32063 33515 30839 27930 33275 34126 29521 34684 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17453000 30990 4600 29117 58190 46988 46988 1 9606 Homo sapiens 0.04034186392959782 YGPEGEAVPVAIPEER Unmodified 1711.8417 0.84171503 1276 A0A1B0GVT8;H0YD36;E5KNX5;E5KNW2;E5KNV8;E5KNU5;A8K5G6;P54098;Q6LCA9;A0A0D9SFM1;A0A590UJP1;A0A1B0GTQ6 POLG;polg DNA polymerase subunit gamma-1 yes no 0 0 0 2 0 1 53.175 53.208 2 0.048086 15867 20230619_1881_Aki_TMTPro18x_K_F2 77.593 62.022 8739.7 5920.2 9750.7 8601.8 6593.4 8509.4 7443.9 9603.9 10134 11655 11849 13086 10033 9875 10473 11346 10775 13511 8080.4 5445.6 9765.9 8467.9 7133.6 8631.2 7553.9 9784.6 10244 11705 12005 13101 10326 10366 10665 11497 10326 12800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15752000 30991 1276 29118 58191 46989 46989 1 9606 Homo sapiens 0.01426784018667604 YGPFVADFADK Unmodified 1228.5764 0.57643921 2057 Q5QNZ2;Q08ET0;A8K4W2;P24539;Q53GB3 ATP5F1;hCG_39985 ATP synthase F(0) complex subunit B1, mitochondrial yes no 0 0 0 6 0 1 61.562 61.616 2 0.0010674 18843 20230619_1886_Aki_TMTPro18x_K_F6 102.52 69.146 326550 242720 293830 306530 317020 359840 369140 360330 368950 365300 395830 394750 409170 347350 375610 418380 374900 418810 301530 222820 301680 305050 328920 359780 369170 368190 376960 369770 405470 397920 415530 363610 382750 419210 359010 397620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 147780000 30992 2057 29119 58192 46990;46991 46991 2 9606 Homo sapiens -0.02870595593503822 YGPGEPSPVSETVVTPEAAPEK Unmodified 2240.0849 0.084858426 2005 Q7Z3Z9;A8K139;P32004-3;P32004-2;P32004;H0Y5C3 L1CAM Neural cell adhesion molecule L1 yes no 0 0 0 3 0 1 53.604 53.657 3 3.1519E-23 15777 20230619_1882_Aki_TMTPro18x_K_F3 173.21 162.57 106960 84114 99214 109960 64728 69584 92454 94388 114500 146920 147630 166640 165370 135710 142860 158040 157460 170030 98823 77230 100960 108410 70741 74022 92376 96177 116840 146170 150800 167120 167100 142210 146560 159090 150600 161320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 111900000 30993 2005 29120 58193 46992;46993;46994 46992 3 9606 Homo sapiens 0.01441939162396011 YGPIADVSIVYDQQSR Unmodified 1809.8897 0.88972785 2322 Q8N1H4;Q68DZ9;Q59GA1;B2RDQ3;P62995-3;P62995 DKFZp686F18120;TRA2B Transformer-2 protein homolog beta yes no 0 0 0 6 0.816 1 1 1 60.032 60.086 3 3.8995E-12 18183 20230619_1886_Aki_TMTPro18x_K_F6 168.5 148.78 90876 69490 87005 97133 94014 100560 98780 99152 100240 129560 120110 130590 128080 98829 115710 137230 122480 140780 83967 63857 88867 95838 97191 101390 99403 102200 103000 129250 122730 131390 129800 105080 118380 137410 117250 133610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 422720000 30994 2322 29121 58194;58195;58196 46995;46996 46995 2 9606 Homo sapiens 0.01717857938706402 YGPLLDLPELPFPELER Unmodified 1997.051 0.050979523 4397 Q96T23-2;Q96T23;H0YER1;Q05DG0;H7C306 RSF1 Remodeling and spacing factor 1 yes no 0 0 0 6.5 0.5 1 1 66.331 66.364 3 2.5266E-13 20893 20230619_1886_Aki_TMTPro18x_K_F6 146.78 119.57 17327 14368 15240 16641 12751 14624 13859 18017 17388 17451 21238 19091 20344 16047 19446 23588 18672 17794 16007 13173 15623 16600 13487 15020 14040 18149 17662 17708 21554 19228 20736 17046 19771 23248 17867 16965 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40450000 30995 4397 29122 58197;58198 46997;46998 46997 2 9606 Homo sapiens 0.0923360725191742 YGPLSGVNVVYDQR Unmodified 1565.7838 0.78380622 3861 Q549U1;Q13595-4;Q13595-3;Q13595;Q13595-2 HSU53209;TRA2A Transformer-2 protein homolog alpha yes no 0 0 0 4.5 3.5 1 1 55.958 55.989 2;3 2.9732E-08 16156 20230619_1888_Aki_TMTPro18x_K_F8 189.24 152.55 335960 290450 332150 360410 327140 391730 377860 384050 391380 435060 412860 390560 448360 357730 407710 480170 432400 424680 310740 266440 337880 358640 341750 393500 378580 394190 399130 435500 424030 397570 454380 376640 417070 477250 413420 403980 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 164290000 30996 3861 29123 58199;58200 46999;47000;47001;47002 47001 4 9606 Homo sapiens 0.023545668839005884 YGPPPSYPNLK Unmodified 1231.6237 0.62372375 3850 Q13435;E9PPJ0;Q7Z3K9;H0YEX5 SF3B2;DKFZp781L0540 Splicing factor 3B subunit 2 yes no 0 0 0 2.5 0.5 1 1 51.187 51.245 3 0.00082645 14963 20230619_1881_Aki_TMTPro18x_K_F2 92.538 54.518 662910 504380 609190 589200 498170 679690 642020 615230 445940 649260 700200 797030 831540 682100 673820 869210 870400 897900 612300 462640 621680 589430 530680 678700 633430 634050 476370 658300 712920 798580 836920 717330 699880 871450 831080 852430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 570580000 30997 3850 29124 58201;58202 47003;47004 47003 2 9606 Homo sapiens 0.017176836774979165 YGPQYGHPPPPPPPPEYGPHADSPVLMVYGLDQSK Unmodified 3783.8032 0.80316804 1455;1520 Q6NTA2;A0A384N6C7;P14866;B2R959;M0QXS5;P14866-2;A0A3B3ITJ4 HNRNPL Heterogeneous nuclear ribonucleoprotein L no no 0 0 0 7.67 0.471 1 2 59.102 59.146 4;5 3.7314E-11 17404 20230619_1888_Aki_TMTPro18x_K_F8 114.23 95.233 56148 52189 61482 69640 50043 63211 68201 63756 57586 89701 85574 94579 106930 84689 85029 100020 98586 111370 52004 47899 61906 68796 53376 64400 67421 65822 60532 89344 87476 95418 107370 88547 87681 100850 94284 105610 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 243450000 30998 1455;1520 29125 58203;58204;58205 47005;47006 47005 2 9606 Homo sapiens 0.022618581102051394 YGPSLMPGGNK Oxidation (M) 1135.5332 0.53319418 3630 P52209-2;P52209;B4E2U0;B4DL86;K7EM49;K7EMN2;K7EPF6 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 1 0 4.5 3.5 1 1 44.751 44.765 3 0.0086188 12165 20230619_1880_Aki_TMTPro18x_K_F1 66.92 56.397 168490 132780 165560 174010 214390 228450 196470 203430 227190 211140 222610 220360 233470 190130 206020 220150 224890 200060 155740 121920 169200 173020 218310 226290 200100 209690 229570 213290 229060 222270 236580 198710 211090 219620 214820 190330 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 239090000 30999 3630 29126 58206;58207 47007;47008 47007 2321 2 9606 Homo sapiens -0.029151086424235473 YGPSLMPGGNK Unmodified 1119.5383 0.53827956 3630 P52209-2;P52209;B4E2U0;B4DL86;K7EM49;K7EMN2;K7EPF6 PGD 6-phosphogluconate dehydrogenase, decarboxylating yes no 0 0 0 2.5 0.5 1 1 49.817 49.884 3 0.00026059 14364 20230619_1881_Aki_TMTPro18x_K_F2 86.898 70.695 273240 235280 279300 289040 324330 397460 346290 372720 412040 370860 359760 412320 439460 347410 321170 436510 431910 424880 252790 215820 284040 288910 334270 392970 349920 382240 414020 376220 375300 414420 440310 365290 335410 436230 412130 403700 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 416980000 31000 3630 29126 58208;58209 47009;47010 47009 2 9606 Homo sapiens -0.01670804779791979 YGQFSGLNPGGR Unmodified 1251.5996 0.59963426 3704 P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;E9PMD7;P62136-3;C0STL0 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase yes no 0 0 0 2.5 0.5 1 1 47.761 47.837 2 1.986E-06 13446 20230619_1881_Aki_TMTPro18x_K_F2 149.17 119.86 151950 117860 152530 169720 162940 193490 192010 174970 218400 204780 214230 210720 236710 180510 198530 214570 221750 245540 140460 108340 155200 167360 169310 193340 192670 180880 220820 205590 220930 212630 238920 189160 203930 216750 212110 232800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 176690000 31001 3704 29127 58210;58211 47011;47012 47011 2 9606 Homo sapiens -0.016101567561463526 YGQFSGLNPGGRPITPPR Unmodified 1912.9908 0.9907793 3704 P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;E9PMD7;P62136-3;C0STL0 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase yes no 0 0 1 6 0.816 1 1 1 48.104 48.182 3 9.2427E-24 13061 20230619_1886_Aki_TMTPro18x_K_F6 203.89 184.83 67464 53788 65458 66286 66952 71621 65527 69762 72947 89812 75462 74163 92099 69476 73847 98181 85615 83572 62357 49354 66678 65996 69380 71990 66423 71906 74134 89186 78015 75856 92550 73375 76197 97310 81788 79539 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 228040000 31002 3704 29128 58212;58213;58214 47013;47014 47013 2 9606 Homo sapiens 0.07080354432059721 YGQHPNIITLK Unmodified 1282.7034 0.70337105 1408;2680 B1AXG1;P51812;A0A384MDW3;B7ZB17;B4DG22;B4DKZ2;A0A2R8Y603;Q15349-2;Q15349-3;Q15349;F2Z2J1;Q9UK32-2;Q9UK32;B7Z3B5;B7Z2K7;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q5SVM6 RPS6KA3;RPS6KA2;RPS6KA6;RPS6KA1 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-2;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-6;Ribosomal protein S6 kinase alpha-1 no no 0 0 0 3 0 1 47.142 47.221 3 0.00032456 12887 20230619_1882_Aki_TMTPro18x_K_F3 100.55 67.948 169100 143240 185610 185390 189010 212220 202650 197710 231180 255730 253810 230040 261390 220570 187950 259120 272770 279330 156520 131470 187240 184120 196420 212220 204470 204510 234960 254550 259410 234430 263100 229960 197490 260680 260210 265080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109180000 31003 1408;2680 29129 58215 47015 47015 1 9606 Homo sapiens 0.0733275035152019 YGQISEVVVVK Unmodified 1219.6812 0.68123863 3874 Q14011;Q53XX5;Q14011-2;K7EQR7;D6W5Y5;K7EPM4;K7EMY9;K7EJV1;K7ELT6;K7ER40;Q6ZR81;B4E2A3;K7EJV5;K7ELV6;K7ENX8 CIRBP Cold-inducible RNA-binding protein yes no 0 0 0 7.5 0.5 2 2 56.08 56.138 2;3 2.1853E-06 16151 20230619_1888_Aki_TMTPro18x_K_F8 199.4 144.62 359770 287510 320270 368040 311650 335790 385580 389930 382340 405360 400990 404540 413350 372050 391080 412410 407320 455390 332320 263910 328800 364660 326300 343260 384450 395070 390580 408680 411170 409590 420540 387000 399100 416150 389900 431900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 356210000 31004 3874 29130 58216;58217;58218;58219 47016;47017 47017 2 9606 Homo sapiens 0.08018525883085204 YGRDDIDNIAR Unmodified 1306.6266 0.6265773 940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 SMARCA1 Probable global transcription activator SNF2L1 yes no 0 0 1 3.5 0.5 1 1 39.629 39.677 3 0.0013008 9492 20230619_1882_Aki_TMTPro18x_K_F3 91.245 72.933 91329 59002 104200 103020 138650 130270 122480 128970 141130 75150 84027 79595 74401 69875 88660 71674 86531 78380 84437 54413 105270 100730 140660 129600 124990 130370 140250 79075 88489 80324 76990 72473 89689 72439 82756 74404 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 111990000 31005 940 29131 58220;58221 47018 47018 1 9606 Homo sapiens -0.014470929356320994 YGREDLDVLGLTFR Unmodified 1652.8522 0.85222014 2004 P49407;P49407-2;A8K103;E9PM35 ARRB1 Beta-arrestin-1 yes no 0 0 1 7 0 1 60.846 60.889 3 2.091E-08 18165 20230619_1887_Aki_TMTPro18x_K_F7 134.02 42.179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31006 2004 29132 58222 47019 47019 1 9606 Homo sapiens 0.05190811463717182 YGSDIVPFSK Unmodified 1111.555 0.55497548 3444 P13010;Q53T09 XRCC5 X-ray repair cross-complementing protein 5 yes no 0 0 0 3.67 3.09 1 1 1 56.284 56.309 2 6.8266E-05 16945 20230619_1880_Aki_TMTPro18x_K_F1 144.65 103.66 742410 674180 702950 736490 718180 678130 799040 773030 758580 879960 957120 941030 1027400 803800 900240 1109800 1024800 936040 686660 617600 717670 738340 745840 692960 800000 786230 783570 884970 975660 948430 1039800 849820 925670 1100000 978710 891220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 822560000 31007 3444 29133 58223;58224;58225 47020;47021 47020 2 9606 Homo sapiens 0.0036601937779323634 YGSFFCDCGAK Unmodified 1310.506 0.50599315 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;Q5T4S7-5 UBR4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 8 0 1 54.96 55.027 2 6.4774E-07 15722 20230619_1888_Aki_TMTPro18x_K_F8 138.66 122.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31008 4061 29134 58226 47022 47022 1 9606 Homo sapiens -0.1368396024508911 YGSGSGQQSVTGVEASDDANSYWR Unmodified 2520.0789 0.078938201 4185 Q86U75;Q9HCN8 SDF2L1 Stromal cell-derived factor 2-like protein 1 yes no 0 0 0 4 0 1 51.319 51.347 3 7.5391E-28 14618 20230619_1883_Aki_TMTPro18x_K_F4 193.87 181.75 9838.2 10334 10514 8860.3 8061.8 11061 12806 12738 11128 13098 13412 15923 14043 12406 11767 13479 15916 16633 9118.4 9444.3 10583 9114.8 8702.3 11059 12589 12903 11528 13294 13698 15906 14210 12971 12243 13699 15193 15762 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29862000 31009 4185 29135 58227 47023 47023 1 9606 Homo sapiens -0.12029811087222697 YGSIIDRDDRDER Unmodified 1608.7492 0.74921163 215 F8WE23;C9JR02;C9J9P7;C9JFQ5;F8W910;E1CJT4;A0A0S2Z5U0;A0A0S2Z549;A0A024R2U6;P52756-3;P52756-4;P52756-2;P52756-5;P52756 RBM5;RBM5 variant RNA-binding protein 5 yes no 0 0 2 2 0 1 36.746 36.804 4 7.1489E-06 8416 20230619_1881_Aki_TMTPro18x_K_F2 110.98 91.591 27141 22633 28622 32763 32051 37853 40111 32945 47371 35523 39864 41033 42692 35944 38418 39827 40981 41153 25111 20800 29042 32301 33256 37761 40165 34090 47503 35964 41385 41233 43280 37450 39290 40035 39187 39073 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23935000 31010 215 29136 58228 47024 47024 1 9606 Homo sapiens -0.030813009948587933 YGSPGNVSK Unmodified 907.43995 0.43994572 3354 O95373 IPO7 Importin-7 yes yes 0 0 0 8 0 1 39.319 39.306 2 0.053534 9250 20230619_1888_Aki_TMTPro18x_K_F8 76.282 52.31 15850 9582 16552 17865 18259 23494 17179 23222 20470 18228 23224 25273 19427 24102 17949 13567 30082 27966 14638 8848.1 16792 17421 18831 23296 17508 23589 20763 18905 23543 25275 19941 24328 18919 14627 28651 26418 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64329000 31011 3354 29137 58229 47025 47025 1 9606 Homo sapiens -0.017476650333264843 YGSPGNVTK Unmodified 921.4556 0.45559579 3244 O15397-2;O15397;F5H244 IPO8 Importin-8 yes no 0 0 0 8 0 1 40.029 40.019 2 0.0026473 9478 20230619_1888_Aki_TMTPro18x_K_F8 104.48 44.411 50957 30871 56894 51874 74247 86921 65656 72969 78416 44803 61217 62685 59289 55435 51364 36691 70662 65845 47088 28464 57540 51091 75557 84848 67101 74710 78358 47401 63535 62563 60253 56443 53345 38860 67389 62248 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38384000 31012 3244 29138 58230 47026 47026 1 9606 Homo sapiens -0.008273785162828062 YGSQVEDQRECVSR Unmodified 1711.7584 0.75839611 2739 P08069;C9J5X1 IGF1R Insulin-like growth factor 1 receptor;Insulin-like growth factor 1 receptor alpha chain;Insulin-like growth factor 1 receptor beta chain;Tyrosine-protein kinase receptor yes no 0 0 1 3 0 1 34.048 34.113 3 7.0397E-05 7233 20230619_1882_Aki_TMTPro18x_K_F3 98.943 90.146 13781 11889 14892 14656 14323 12951 13668 17644 15070 17655 20426 18230 16279 14581 17999 19188 21359 20756 12756 10905 15019 14561 14880 13342 13885 17689 15492 17843 20511 18370 16835 15404 18464 19291 20399 19700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12256000 31013 2739 29139 58231 47027 47027 1 9606 Homo sapiens -0.06901275700852239 YGTCPHGGYGLGLER Unmodified 1635.7464 0.74637486 3265 O43776;B4DN60 NARS Asparagine--tRNA ligase, cytoplasmic yes no 0 0 0 7.5 0.5 1 1 42.879 42.918 3 1.4855E-05 10661 20230619_1888_Aki_TMTPro18x_K_F8 109.35 99.812 42559 26970 42815 47729 60023 65975 56040 56964 66529 50670 57557 71775 68587 54499 62330 52320 73163 82638 39300 24880 43765 46687 60885 65082 57044 58644 66793 52214 60061 71258 69340 56725 64031 54337 69963 78134 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89953000 31014 3265 29140 58232;58233 47028 47028 1 9606 Homo sapiens -0.04606847653371915 YGTDLSR Unmodified 810.38718 0.38718187 3387 P05023;P05023-4;P05023-3;B7Z3V1;P05023-2;Q5TC01;Q5TC02 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 4.5 0.5 1 1 36.822 36.89 2 0.0049029 8260 20230619_1883_Aki_TMTPro18x_K_F4 145.04 40.934 144290 72805 129430 182440 225890 255710 226000 241510 296070 204540 270120 295240 266070 251480 224490 164810 345860 314320 132990 67645 134560 175880 227190 252400 229890 246640 296230 211630 278280 293880 270010 256330 235320 175600 329530 297070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 284640000 31015 3387 29141 58234;58235 47029 47029 1 9606 Homo sapiens -0.025596230961241417 YGTFVNEEK Unmodified 1085.5029 0.50293991 1813 O60934;A0A8V8TM88;A0A8V8TM80;A6H8Y5;A8K1D3;A0A8V8TKW6;A0A8V8TMH1;A0A8V8TMH6;A0A8V8TM94;A0A8V8TKY5;A0PJ71;A0A8V8TLA3;A0A8V8TKY0;A0A8V8TL98;E5RGU1;A0A8V8TL91;V9PAU0 NBN;NBS1 Nibrin yes no 0 0 0 4.5 0.5 1 1 48.16 48.218 2 0.0030328 13013 20230619_1885_Aki_TMTPro18x_K_F5 111.61 69.623 27893 23235 25201 28839 27587 31747 31864 27959 33083 32857 38591 36834 39223 28291 30797 43579 36101 42457 25775 21317 25887 28696 28593 31794 31911 28973 33847 33065 39341 36952 39576 30292 31832 43440 34534 40314 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44149000 31016 1813 29142 58236;58237 47030 47030 1 9606 Homo sapiens -0.03639144035969366 YGVAWEK Unmodified 851.41775 0.41775372 260 A0A024R3R5;Q14739 LBR Lamin-B receptor yes no 0 0 0 7.5 0.5 1 1 50.603 50.682 2 0.048383 13892 20230619_1887_Aki_TMTPro18x_K_F7 91.041 43.974 247080 256650 281840 232800 271980 288110 265560 264640 262960 309290 356760 294840 365760 297730 317380 352510 340230 355470 229120 234660 282930 238110 282870 286860 268290 273100 271970 309700 361570 300390 370560 310030 325050 353430 325410 337540 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 395480000 31017 260 29143 58238;58239 47031 47031 1 9606 Homo sapiens -0.013898447111046153 YGVEALLHR Unmodified 1056.5716 0.5716286 2982 H0YHR2;H0YIQ8;F8VXI8;F8VX10;Q9H9L4 KANSL2 KAT8 regulatory NSL complex subunit 2 yes no 0 0 0 8 0 1 48.629 48.695 3 0.00040876 12984 20230619_1888_Aki_TMTPro18x_K_F8 115.71 39.65 28006 21395 23087 26714 29087 27748 24499 26153 28706 29631 26854 27637 27925 24716 25841 27153 27275 29544 25848 19637 23963 26551 29600 27958 25106 26919 28960 29697 27692 28034 28375 25723 26400 27380 26098 28027 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13656000 31018 2982 29144 58240 47032 47032 1 9606 Homo sapiens 0.04560565054430299 YGVFPLR Unmodified 850.47012 0.47012364 3433;1843 A0A8V8TP20;Q02880-2;Q02880;Q71UH4;E9PCY5;B4DKD0;A0A8V8TPE3;A0A8V8TN33;P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha no no 0 0 0 4.5 0.5 1 1 53.524 53.569 2 0.014103 15510 20230619_1883_Aki_TMTPro18x_K_F4 113.07 70.299 401990 339960 351110 369200 281460 424640 342840 322200 449800 364620 372220 336150 399800 304920 343620 398900 334300 342430 371390 311490 360070 371230 300750 422680 345450 337500 448820 365690 386440 341690 404240 320640 350200 396050 320000 325810 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290760000 31019 1843;3433 29145 58241;58242 47033 47033 1 9606 Homo sapiens 0.03890738422512641 YGVGFWK Unmodified 855.42792 0.42792448 1050 Q99798;A2A274;A0A0K0K1H7;A0A7I2V3F1;B2RBW5;A0A7I2V5T4;B4DZ08;A0A7I2V586;A0A7I2V3U0;A0A7I2V5A1;B4DLY4;B4DJW1;A0A7I2V614;A0A7I2V538;A0A7I2V6A6;A0A7I2V3C8;A0A7I2V5W7;A0A7I2V4I8 ACO2 Aconitate hydratase, mitochondrial yes no 0 0 0 3.5 0.5 1 1 58.127 58.144 3 0.061995 17554 20230619_1883_Aki_TMTPro18x_K_F4 54.765 40.607 46838 40584 36192 51959 48029 56671 54643 66979 64396 59752 59532 62351 68050 58462 55149 72746 70504 77518 43244 37241 37937 51586 49194 57162 55018 67473 64862 60843 61691 63074 68592 61197 57253 73082 67358 73551 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16945000 31020 1050 29146 58243;58244 47034 47034 1 9606 Homo sapiens -0.005572369858668935 YGVIILDEAHER Unmodified 1413.7252 0.72522871 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 4 1.41 1 1 1 1 1 50.648 50.709 3 2.8673E-11 14282 20230619_1883_Aki_TMTPro18x_K_F4 193.73 165.52 379780 322210 371550 387450 398660 703340 448970 392600 883820 344500 331790 320160 378450 289650 385190 438510 393670 373030 351190 295510 379000 389740 416320 679350 462450 421270 851950 351650 368270 325450 385200 307740 392330 434420 376440 355080 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1840699999.9999998 31021 3246 29147 58245;58246;58247;58248;58249 47035;47036;47037 47037 3 9606 Homo sapiens 0.0349151030941357 YGVIIVGNPK Unmodified 1058.6124 0.61243078 462 Q92900;Q92900-2;A0A024R7L8;A0A024R7L5;A0A994J4L7;A0A8A5YP40;B3KY55 UPF1 Regulator of nonsense transcripts 1 yes no 0 0 0 3 0 1 54.241 54.287 3 0.00043246 16046 20230619_1882_Aki_TMTPro18x_K_F3 105.78 87.17 63496 50291 57049 64825 57964 69794 65010 62931 71247 69567 69618 63929 76052 60742 71088 73686 72714 70574 58652 46167 58557 64320 60387 70023 65337 64953 72180 69793 71756 65076 77150 63470 72477 73663 69542 67072 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98046000 31022 462 29148 58250 47038 47038 1 9606 Homo sapiens 0.08546906374044738 YGVNPGPIVGTTR Unmodified 1329.7041 0.70409934 3578;668;675 A0A024RBE7;P42167;G5E972;P42167-3;H0YJH7;A0A024RBH7;P42167-2;Q59G12;P42166 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin no no 0 0 0 2 0.816 1 1 1 47.2 47.252 2 6.2412E-15 13164 20230619_1881_Aki_TMTPro18x_K_F2 195.8 173.65 721490 525000 669930 726630 651930 741230 754040 717490 811750 768000 849610 797020 864330 726390 756350 1005900 896550 881980 666290 482480 684940 717270 681590 747690 756240 736220 825030 774450 870160 806190 876610 766220 780150 998620 856360 839070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 772150000 31023 668;675;3578 29149 58251;58252;58253 47039;47040 47040 2 9606 Homo sapiens 0.0524354500055324 YGVQADR Unmodified 807.38752 0.38751622 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;Q76MU0 CTTN;EMS1 Src substrate cortactin yes no 0 0 0 3.5 0.5 1 1 32.806 32.871 2 0.061146 6698 20230619_1882_Aki_TMTPro18x_K_F3 81.191 46.383 45795 23660 62154 72294 76420 98136 71402 84644 83168 58703 91814 127270 91133 85723 94592 47164 124210 125110 42373 22077 62075 69220 78191 96808 72693 86704 84284 62813 94025 124480 93276 87787 97483 52536 118560 118000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 79843000 31024 1413 29150 58254;58255 47041 47041 1 9606 Homo sapiens -0.02388203376290221 YGVQADRVDK Unmodified 1149.5778 0.57783619 1413 Q53HG7;A0A384MDY8;Q14247;A0A024R5M3;Q14247-3;Q14247-2;Q76MU0 CTTN;EMS1 Src substrate cortactin yes no 0 0 1 5 0 1 38.374 38.466 3 0.0010787 8893 20230619_1885_Aki_TMTPro18x_K_F5 95.362 88.509 150480 112770 129320 149020 168960 143390 163210 167920 184430 165300 192110 165940 193050 154410 173570 211980 203250 161610 138910 103570 133790 147440 171930 146090 165550 169770 186930 167220 196590 168270 196030 162670 178680 209180 193890 154190 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138390000 31025 1413 29151 58256 47042 47042 1 9606 Homo sapiens 0.009030384952893655 YGVSGYPTLK Unmodified 1083.5601 0.56006086 2389 P30101;V9HVY3;B3KQT9;A0A8I5KT88;B3KQT2;A0A8I5KNU9;A0A8I5KW33;A0A8I5KS72;A0A8I5KW00;A0A8I5QKQ5;A0A8I5KPY2;A0A8I5KXC9;A0A8I5KRV3;A0A8I5KYJ6;A0A8I5KXE2;A0A8I5KP58;A0A8I5QJM1;H7BZJ3 PDIA3;HEL-S-269 Protein disulfide-isomerase A3;Protein disulfide-isomerase yes no 0 0 0 2.5 0.5 2 2 51.802 51.854 2;3 2.5971E-05 14950 20230619_1882_Aki_TMTPro18x_K_F3 179.51 122.33 521850 395550 449830 466730 448090 542200 524290 533620 566610 629740 643420 685350 708720 597680 672950 790290 678570 778760 481770 362860 463100 466610 468170 542290 525670 548210 578260 632820 659770 690380 719470 629580 685940 790050 649890 739420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2053199999.9999998 31026 2389 29152 58257;58258;58259;58260 47043;47044 47044 2 9606 Homo sapiens 0.02162323240418118 YGYTEDPLEVR Unmodified 1340.6248 0.62484596 2068 D6W5H1;A8K583;Q14966-4;Q14966-3;Q14966;B4DF54;Q14966-2;Q14966-6 ZNF638 Zinc finger protein 638 yes no 0 0 0 2 0 1 51.513 51.558 2 0.00015411 15160 20230619_1881_Aki_TMTPro18x_K_F2 133.23 99.849 51790 44177 44807 58209 41439 52291 59430 59812 54478 66922 70471 67497 75823 61035 65217 70673 76029 76129 47848 40553 46146 57540 43833 53475 58738 60784 56457 67230 71766 68289 76686 63711 67128 71156 72640 72249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35592000 31027 2068 29153 58261 47045 47045 1 9606 Homo sapiens -0.03184146744251848 YHAASAEEQATIER Unmodified 1574.7325 0.73249893 522 A0A024R8L0;J3QLS3;Q9Y2R9;J3KSI8;J3QQS1;J3QKW2 MRPS7 28S ribosomal protein S7, mitochondrial yes no 0 0 0 2.5 0.5 1 1 34.857 34.916 3 6.9055E-29 7605 20230619_1881_Aki_TMTPro18x_K_F2 252.08 195.94 13648 6366.7 10030 14642 15514 15033 13943 13117 17449 14389 17992 16169 17665 14163 13122 18218 20076 16176 12558 5908.5 10597 14087 15637 15118 14252 13575 17588 14538 18399 16281 17824 14889 13834 18114 19114 15400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141890000 31028 522 29154 58262;58263 47046 47046 1 9606 Homo sapiens -0.03187801880790175 YHAEEVEER Unmodified 1160.5098 0.5098162 4115 Q6NZY4;A8K559;Q6NZY4-2;F5H6J5;F5GX80 ZCCHC8 Zinc finger CCHC domain-containing protein 8 yes no 0 0 0 1 0 1 30.514 30.514 3 4.9048E-09 6172 20230619_1880_Aki_TMTPro18x_K_F1 182.65 148.77 26404 8308.2 20695 26274 29336 22479 23900 26128 35512 29838 34089 33916 43899 33227 22237 28936 33692 30408 24277 7788.1 21645 24969 29602 23095 24773 26542 35461 30095 35434 34213 43438 34089 23658 29219 32103 28878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37082000 31029 4115 29155 58264 47047 47047 1 9606 Homo sapiens -0.06401831155380933 YHDEADQSALQR Unmodified 1431.6379 0.63787026 3821 Q6AWA4;Q12789;Q6AHZ7;Q12789-3;H3BRD0 DKFZp686O0870;GTF3C1;DKFZp686A111 General transcription factor 3C polypeptide 1 yes no 0 0 0 1.5 0.5 1 1 32.952 32.981 3 1.2752E-24 6865 20230619_1881_Aki_TMTPro18x_K_F2 218.62 196.42 34157 12094 30586 33299 41090 35930 42397 43024 57039 42886 44103 47775 46717 44143 36406 46069 44728 45233 31445 11288 31536 31887 41840 36275 43101 43451 56727 43523 45982 48143 47149 45730 37714 46197 42719 42970 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100250000 31030 3821 29156 58265;58266 47048;47049 47049 2 9606 Homo sapiens -0.060683156321374554 YHEAWQK Unmodified 960.44537 0.44536545 3468 P17812;A0A3B3IRI2;B4E1E0;A0A8Q3WKZ7;B4DMB5;P17812-2;A0A8Q3WL40;A0A3B3IRQ8;A0A3B3ITF6 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 6.5 0.5 1 1 38.991 39.064 3 0.0023926 8866 20230619_1887_Aki_TMTPro18x_K_F7 120.62 55.464 405040 116190 319610 404140 401620 379280 422680 376870 560360 464650 578990 541010 568630 520190 398730 473400 566970 545970 372360 109290 333460 383440 411170 384970 429000 387800 563330 467540 592130 545080 572940 534710 418120 480420 540700 517870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 254630000 31031 3468 29157 58267;58268 47050 47050 1 9606 Homo sapiens -0.03643941450854982 YHEEFEK Unmodified 980.42396 0.42396131 157 A0A024R1S8;Q14847;A8K1D2;Q14847-2;C9J9W2;Q14847-3;Q9NPR7 LASP1 LIM and SH3 domain protein 1 yes no 0 0 0 3 0.816 1 1 1 38.892 38.946 3 0.00099924 9170 20230619_1882_Aki_TMTPro18x_K_F3 161.11 126.86 288980 70495 207220 245730 365340 228710 301550 322110 467930 357270 438740 434200 465130 408540 281590 462560 360970 430970 265410 66435 219700 233260 364400 234810 312740 323480 465780 361730 452270 436640 465260 424940 294990 461700 345090 409420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 346670000 31032 157 29158 58269;58270;58271 47051;47052 47052 2 9606 Homo sapiens -0.06703371270236858 YHFAALEK Unmodified 977.49707 0.49706667 1125 A0A0S2Z5E9;Q69YN2-3;Q69YN2;A0A286YF56 CWF19L1 CWF19-like protein 1 yes no 0 0 0 8 0 1 46.721 46.77 3 0.00071976 12160 20230619_1888_Aki_TMTPro18x_K_F8 124.98 84.632 96403 44256 72481 82767 89375 85892 93779 91436 116120 69598 75273 65930 70263 58291 79047 77512 84541 62444 88714 40934 75921 80401 91608 86707 94937 92457 115250 71479 78894 66919 72310 61382 80512 76755 80682 59550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146760000 31033 1125 29159 58272 47053 47053 1 9606 Homo sapiens 0.007418022430329074 YHFLEER Unmodified 992.47158 0.4715802 1793 Q96I59;A0A8Q3SHT5;B3KPX5;A0A8Q3SHL5;A0A8Q3SIK4;A0A8Q3WKF4;B2RD66;A0A8Q3WKE5;H0YE96;A0A8Q3WKD2;Q96I59-2;Q9H5H1;A0A8Q3WKX6 NARS2 Probable asparagine--tRNA ligase, mitochondrial yes no 0 0 0 4 0 1 40.986 41.029 3 0.00059092 9991 20230619_1883_Aki_TMTPro18x_K_F4 153.15 109.34 90135 30363 73299 89471 86319 78349 82883 104760 116520 108440 115760 117040 117570 94250 96281 128510 117160 127180 82911 28395 76124 85248 88510 80600 84860 105240 116770 109620 118850 117690 118900 99804 99616 128410 111960 120770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142790000 31034 1793 29160 58273 47054 47054 1 9606 Homo sapiens -0.02495672279394512 YHGNVMLLR Oxidation (M) 1117.5702 0.57024839 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 1 0 2.5 0.5 1 1 38.793 38.853 3 0.00067863 9206 20230619_1881_Aki_TMTPro18x_K_F2 100.02 67.697 154890 100970 149740 131560 138030 148190 146690 146890 201900 101730 108900 96978 90374 91108 125980 99334 121220 92549 143000 92777 152240 130610 144610 148540 149090 148950 198500 105300 115270 98549 94667 94539 127060 99416 115830 88081 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 338500000 31035 3606 29161 58274;58275 47055;47056 47055 2288 2 9606 Homo sapiens 0.016166076940180574 YHGNVMLLR Unmodified 1101.5753 0.57533377 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 3.5 0.5 1 1 42.232 42.285 3 5.3451E-07 10589 20230619_1882_Aki_TMTPro18x_K_F3 164.53 130.74 239290 138490 208640 200660 180740 206780 222080 198130 275200 161510 171230 127820 149750 122930 189830 154080 159870 121520 220630 127480 214030 197600 191260 208340 223080 202130 272770 164420 179430 131330 155410 128620 190460 152650 152980 115910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 180620000 31036 3606 29161 58276;58277 47057;47058 47057 2 9606 Homo sapiens 0.028609115566268883 YHHCVGEK Unmodified 1028.4498 0.4497989 4267 V9HWF3;Q8TCD5;A0A384NYP3;J3KSX6;J3KRC4;J3KSY6;Q8TCD5-2;J3KSF0;J3QQX8 HEL74;NT5C 5'(3')-deoxyribonucleotidase, cytosolic type yes no 0 0 0 5.5 0.5 1 1 27.999 28.051 4 0.0051505 5029 20230619_1885_Aki_TMTPro18x_K_F5 84.244 67.013 42170 5805.6 29671 37284 71220 19263 48328 73131 55534 32089 68787 80494 55273 61386 22049 25307 27010 64780 38696 5650.4 31776 34817 69640 22155 50321 69833 56573 36046 69369 78811 55326 61995 23314 28233 26057 60971 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 30078000 31037 4267 29162 58278;58279 47059;47060 47059 2 9606 Homo sapiens -0.0632880029959324 YHIEVNR Unmodified 929.47191 0.47191456 2436 B3KX19;Q15029-2;Q15029;Q8IXJ3;B4DZB1;Q6IBM8;A8KAP3;Q15029-3;B3KWY2 EFTUD2;SNRP116;U5-116KD 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 5 0.816 1 1 1 34.507 34.568 3 0.00056273 7359 20230619_1885_Aki_TMTPro18x_K_F5 154.09 59.931 179640 58156 157030 177740 223610 190820 189490 209620 238120 202440 250220 257340 230000 204410 207620 212330 246360 218660 165310 54454 162440 169610 225770 192290 194590 212620 240190 206650 255270 256930 234390 212930 213670 213640 235150 207720 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 352840000 31038 2436 29163 58280;58281;58282 47061;47062;47063 47062 3 9606 Homo sapiens 0.004357474404741879 YHIGDEVK Unmodified 959.47125 0.47124585 1532 A0A3B3IUD7;Q14690;B4DH82;B4DES7 PDCD11 Protein RRP5 homolog yes no 0 0 0 3.5 0.5 1 1 40.897 40.948 3 0.0030593 9856 20230619_1883_Aki_TMTPro18x_K_F4 97.635 57.283 85997 38894 84037 94580 121730 107380 114690 107310 121910 96361 122220 124450 122890 98656 113340 117020 124760 116850 79282 36141 86140 90992 123040 107570 116230 109380 123710 98855 125430 124230 124910 103590 116060 117290 119200 111020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 623870000 31039 1532 29164 58283;58284 47064 47064 1 9606 Homo sapiens -0.010110919992371237 YHIIHADIYR Unmodified 1299.6724 0.67240528 2037 A8K492;P56192;B4DF61;B4E0E9;P56192-2;H0YHV5;A0A024RBA2 MARS Methionine--tRNA ligase, cytoplasmic yes no 0 0 0 8 0 1 39.921 39.91 4 0.00021843 9444 20230619_1888_Aki_TMTPro18x_K_F8 121.5 96.116 126170 61944 109360 117940 102910 93632 113730 113740 145620 129530 165790 182220 159180 149430 119980 91566 186730 189530 116250 57285 112410 114130 107630 96963 115080 115310 147230 131670 168900 181260 160940 152230 126210 98541 178040 178970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56542000 31040 2037 29165 58285 47065 47065 1 9606 Homo sapiens 0.03455597037259395 YHNVGLSK Unmodified 916.47667 0.47666558 759 Q14103;Q14103-3;A1LU37;A0A024RDF4;A0A994J4R1;H0Y8G5;B4DTC3;Q14103-2;Q14103-4;A0A024RDB4;H0YA96;A0A994J440;Q12771;B4E0W4 HNRNPD;HNRPD Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 1.5 0.5 1 1 38.091 38.122 3 0.00034101 8950 20230619_1881_Aki_TMTPro18x_K_F2 136.21 89.011 1133400 328450 868490 1056400 1171100 921000 1015400 1032700 1681600 1324300 1332600 1607600 1726600 1385100 895350 1792500 2087400 2217700 1041800 308270 909360 1003700 1187400 943800 1053000 1055400 1661200 1332200 1401300 1611200 1711200 1458700 995780 1815300 1986600 2101400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1929999999.9999998 31041 759 29166 58286;58287 47066;47067 47067 2 9606 Homo sapiens 0.015086315832263608 YHPDEVGK Unmodified 943.43995 0.43994572 4464 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5 SRRT Serrate RNA effector molecule homolog yes no 0 0 0 3.5 0.5 1 1 36.179 36.229 3 0.0016001 8072 20230619_1882_Aki_TMTPro18x_K_F3 112.84 64.559 294910 125890 266780 339890 380570 384130 344470 368500 421920 325010 456540 489470 420780 399810 306050 231050 495480 448180 271660 117280 275460 325700 385220 384350 351830 376420 426340 335940 465220 485930 425540 406470 323200 247390 471910 423550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 250010000 31042 4464 29167 58288;58289 47068;47069 47068 2 9606 Homo sapiens -0.03403665033317793 YHPDKNPDNPEAADK Unmodified 1709.7645 0.76452734 4511 Q9H3Z4-2;Q9H3Z4 DNAJC5 DnaJ homolog subfamily C member 5 yes no 0 0 1 3 0.816 1 1 1 36.883 36.936 4 2.7224E-08 8349 20230619_1882_Aki_TMTPro18x_K_F3 143.97 120.84 97455 59187 94090 104680 104850 92193 117110 103800 115910 126430 154090 129270 123230 105100 119770 100460 104260 75001 89943 54609 96068 101760 108170 94446 117330 105910 119650 126600 154770 130290 126520 108910 120880 99723 99701 71613 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 131400000 31043 4511 29168 58290;58291;58292 47070;47071 47070 2 9606 Homo sapiens -0.061964341976818105 YHPDKNPEGR Unmodified 1211.5683 0.56833414 3295 O75165 DNAJC13 DnaJ homolog subfamily C member 13 yes yes 0 0 1 5 0 1 30.727 30.804 4 0.0055805 5972 20230619_1885_Aki_TMTPro18x_K_F5 83.045 63.386 32645 15701 39576 42194 58669 46625 56763 55559 44366 41027 53320 36668 29425 23018 54479 14386 28535 20899 30161 14614 39918 40451 59167 47005 56958 55745 46220 42075 53178 36971 31923 23762 53301 15100 27500 19809 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19916000 31044 3295 29169 58293 47072 47072 1 9606 Homo sapiens -0.028987297902631326 YHPDKNPNEGEK Unmodified 1426.6477 0.64770667 3532 P31689;P31689-2 DNAJA1 DnaJ homolog subfamily A member 1 yes no 0 0 1 4 1 1 1 34.362 34.436 4 0.00016103 7300 20230619_1885_Aki_TMTPro18x_K_F5 115.57 93.343 30906 17035 44301 43585 58883 60102 53751 53276 46923 42421 63606 48361 47468 40350 52649 23429 39247 26497 28622 15827 44104 41996 59765 59317 54301 54600 48805 43634 63679 48569 49164 40990 52539 24106 37593 25182 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 101570000 31045 3532 29170 58294;58295 47073;47074 47074 2 9606 Homo sapiens -0.048551276267517096 YHPGYFGK Unmodified 967.4552 0.45520186 3592 Q6NZ52;P46776;Q9BQQ5;E9PLL6 RPL27A;L27a 60S ribosomal protein L27a yes no 0 0 0 3.33 1.25 1 1 1 42.615 42.691 3 0.0012451 11045 20230619_1881_Aki_TMTPro18x_K_F2 116.54 88.338 1664100 1188500 1502400 1600000 1488100 1659400 1741000 1664300 1820100 1992900 1872600 1723600 2284500 1807500 1609300 2419600 2193600 2038800 1536300 1092000 1540100 1582600 1553900 1673400 1743300 1708800 1853400 1988200 1935200 1766400 2286000 1894500 1684900 2397900 2092100 1941100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3549599999.9999995 31046 3592 29171 58296;58297;58298 47075;47076;47077 47075 3 9606 Homo sapiens -0.02982753445473918 YHQIGSGK Unmodified 888.44537 0.44536545 756;3227 A0A087WUK2;A0A024RDB5;O14979;B4DTA2;B4DGN3;O14979-2;O14979-3 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 3.67 3.09 1 1 1 33.537 33.555 3 0.00051934 7372 20230619_1880_Aki_TMTPro18x_K_F1 123.21 74.148 168710 31181 204570 224510 336530 271400 255310 328170 249310 165930 303650 344660 231280 234620 254620 96499 303110 284960 155520 30365 206810 211070 335970 271930 262170 326820 256050 181700 306160 337730 239690 238310 260260 110310 289420 268720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 310850000 31047 756;3227 29172 58299;58300;58301 47078;47079 47078 2 9606 Homo sapiens -0.0033194145084962656 YHQYIPPDQK Unmodified 1287.6248 0.62478638 813 I3L2S3;B0QY83;Q05BP1;A4FUJ8;A0A087X287;A0A087WU73;A0A494BZX7;A0A499FIJ6;W0Z7M9;Q9ULH7;Q9ULH7-4;Q8IZQ8-3;Q969V6;Q8IZQ8;Q9ULH7-2;Q8IZQ8-2;Q9ULH7-3;Q9ULH7-5 MKL2;MKL1;mkl1;MYOCD Phosphatase and actin regulator;MKL/myocardin-like protein 2;Myocardin;MKL/myocardin-like protein 1 yes no 0 0 0 7 0 1 39.87 39.935 3 0.0042975 9240 20230619_1887_Aki_TMTPro18x_K_F7 58.592 36.719 32490 21810 30181 34515 39547 45772 43949 41072 53147 46109 45356 42129 47421 42665 42992 51243 57025 48963 29991 20084 31030 33934 40486 45296 44312 42411 53301 46238 46969 42989 48160 44438 44611 51207 54370 46559 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33706000 31048 813 29173 58302 47080 47080 1 9606 Homo sapiens -0.007521019535943196 YHSDDYIK Unmodified 1039.4611 0.4610751 2659 Q6IT96;B5BU61;Q13547;Q5TEE2;B4DSK9;B7Z3S4 HDAC1 Histone deacetylase;Histone deacetylase 1 yes no 0 0 0 4 0 1 39.342 39.384 3 0.00041683 9284 20230619_1883_Aki_TMTPro18x_K_F4 114.89 65.527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31049 2659 29174 58303 47081 47081 1 9606 Homo sapiens -0.0570769972450762 YHSDEYIK Unmodified 1053.4767 0.47672516 4305 Q92769;Q92769-3;B3KUJ5;H3BM24;A0A7R6V290;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;E5RK19 HDAC2 Histone deacetylase 2;Histone deacetylase yes no 0 0 0 4 0.816 1 1 1 38.937 39 3 1.9347E-07 9125 20230619_1883_Aki_TMTPro18x_K_F4 206.09 172.29 339940 114210 258770 301020 357790 279270 324850 315740 424250 397360 463120 439690 483270 375120 316830 474430 434150 367290 312560 106550 271200 288010 362380 284860 332470 322290 428080 398540 473750 442450 484480 394260 332430 468760 413800 350230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 828570000 31050 4305 29175 58304;58305;58306 47082;47083;47084 47083 3 9606 Homo sapiens -0.047874132074412046 YHSDFNR Unmodified 937.40423 0.40422892 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959;K7EII0 SAFB Scaffold attachment factor B1 yes no 0 0 0 4.86 1.25 1 2 2 1 1 30.307 30.38 2;3 0.00018836 5824 20230619_1885_Aki_TMTPro18x_K_F5 168.74 149.26 163600 73760 149040 170160 196090 185050 206600 193150 248330 187690 212980 207240 209950 182790 186240 190660 228120 199730 150740 68471 153440 163930 200070 186080 208870 196650 249000 190690 219990 208690 213330 189760 192120 192000 217660 189720 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 425210000 31051 2020 29176 58307;58308;58309;58310;58311;58312;58313 47085;47086;47087;47088 47088 4 9606 Homo sapiens -0.06697702490339452 YHSDFNRQDR Unmodified 1336.5909 0.59086049 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959;K7EII0 SAFB Scaffold attachment factor B1 yes no 0 0 1 4.5 0.5 1 1 25.424 25.494 4 0.0058075 3822 20230619_1883_Aki_TMTPro18x_K_F4 67.704 42.912 77797 43245 89401 90856 126790 99685 93638 105400 110010 100000 104890 96619 93379 91564 100870 74611 145780 99877 71881 40026 90359 87890 127520 100280 96890 107090 110970 101260 107320 98033 96167 93719 104740 76767 138730 94764 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99413000 31052 2020 29177 58314;58315 47089;47090 47089 2 9606 Homo sapiens -0.06397130392656436 YHSLAPMYYR Oxidation (M) 1315.6019 0.60194245 164;203;642 A0A024R1U4;P51148;P51148-2;K7ERI8;K7ERQ8;F8VVK3;K7ENY4;F8VVZ0;F8VUA5;A0A024R2K1;P20339-2;P20339;A0A024RB09;P61020-2;P61020;Q6FI54 RAB5C;RAB5B;RAB5A Ras-related protein Rab-5C;Ras-related protein Rab-5A;Ras-related protein Rab-5B no no 0 1 0 2.5 0.5 1 1 39.946 40.009 3 0.0012647 9624 20230619_1882_Aki_TMTPro18x_K_F3 88.392 78.066 148470 111810 150250 165030 208130 219170 190740 193820 267010 148260 158410 163010 174160 142770 156310 167320 184470 169690 137230 102820 153440 162900 211180 216880 195560 198510 263030 152990 168340 164190 176450 149250 160870 167860 176130 161200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 113090000 31053 164;203;642 29178 58316;58317 47091;47092 47092 102 2 9606 Homo sapiens -0.043234443427081715 YHSLAPMYYR Unmodified 1299.607 0.60702783 164;203;642 A0A024R1U4;P51148;P51148-2;K7ERI8;K7ERQ8;F8VVK3;K7ENY4;F8VVZ0;F8VUA5;A0A024R2K1;P20339-2;P20339;A0A024RB09;P61020-2;P61020;Q6FI54 RAB5C;RAB5B;RAB5A Ras-related protein Rab-5C;Ras-related protein Rab-5A;Ras-related protein Rab-5B no no 0 0 0 3.5 0.5 1 1 43.641 43.698 3 0.00042152 11141 20230619_1883_Aki_TMTPro18x_K_F4 83.309 64.997 64952 47784 60997 62032 76799 99076 69742 81921 122210 76538 82619 87855 93653 79015 83144 90263 96311 91595 59991 43882 62551 61942 78567 96921 72333 84661 119820 78106 87125 88386 94762 82390 85493 90588 91990 87001 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75567000 31054 164;203;642 29178 58318;58319 47093 47093 1 9606 Homo sapiens -0.030791404800993405 YHTEIVFAR Unmodified 1134.5822 0.58219329 3387 P05023;P05023-4;P05023-3;B7Z3V1;B7Z1N5;Q58I23 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 yes no 0 0 0 7.5 0.5 1 1 42.585 42.624 3 1.0407E-06 10310 20230619_1887_Aki_TMTPro18x_K_F7 186.76 152.9 63526 24488 48427 63234 70568 71125 83946 75016 102300 87851 94006 89619 110280 83223 80440 107600 90152 98952 58431 22808 50886 60687 71906 71351 84350 76722 102810 88190 97487 90738 110550 87384 83012 107170 86223 94045 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 612160000 31055 3387 29179 58320;58321 47094 47094 1 9606 Homo sapiens 0.02028547708869155 YHTINGHNAEVR Unmodified 1409.68 0.68000985 3491 P22626;A0A7I2V4I6;A0A7I2V323;A0A384NL58;P22626-2;A0A7I2V4N1;A0A7I2V3P1;A0A7I2V3P7;A0A7I2V4S4;A0A024RA28;A0A087WUI2;I6L957 HNRNPA2B1;HNRPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 5.4 0.49 3 2 26.995 27.05 3;4 2.4511E-24 5102 20230619_1886_Aki_TMTPro18x_K_F6 255.54 219.88 85295 106460 109990 106590 117820 187680 109140 110080 105280 116110 118220 125190 110480 93767 183190 100370 171710 112380 79317 97359 109840 108690 121890 181740 110490 117940 108070 117320 120570 125530 116460 98123 183870 101710 163990 106830 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 500690000 31056 3491 29180 58322;58323;58324;58325;58326 47095;47096;47097;47098 47098 4 9606 Homo sapiens -0.008442954331485453 YHTINGHNCEVK Unmodified 1470.6674 0.66739625 1469;2450 A0A7I2V2R3;A0A384NL63;P51991;A0A7I2V5D8;A0A7I2V4J6;A0A7I2V4G0;Q65ZQ3;P51991-2;B4DDB6;B4E3E6 HNRNPA3;D10S102;HNRPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 6.33 0.471 2 1 31.086 31.138 4 4.0727000000000005E-24 6357 20230619_1887_Aki_TMTPro18x_K_F7 217.91 185.41 80375 34192 56746 80546 92294 72809 91809 96504 106460 109200 113100 124410 135240 106800 74717 141160 98838 129740 73917 31766 60264 77338 92880 74746 93018 97280 107960 110110 116680 125030 134390 112570 78758 140460 94548 123230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 153160000 31057 1469;2450 29181 58327;58328;58329 47099;47100;47101 47101 3 9606 Homo sapiens -0.049110748876728394 YHTMQAAVDAVAR Oxidation (M) 1447.6878 0.68779734 4451 Q9BVI4;F5H303 NOC4L Nucleolar complex protein 4 homolog yes no 0 1 0 6 0 1 35.519 35.572 3 5.0846E-05 7859 20230619_1886_Aki_TMTPro18x_K_F6 108.58 95.151 21219 9713.3 19390 20898 27606 29620 26550 24746 26447 15602 20101 17990 19139 15136 20195 19366 15622 16322 19552 9004.6 19984 20274 27988 29155 26814 25375 26658 16352 20874 18083 19602 15929 20261 19228 14996 15532 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10409000 31058 4451 29182 58330 47102 47102 2774 1 9606 Homo sapiens -0.018139042278335182 YHTSQSGDEMTSLSEYVSR Oxidation (M) 2191.9328 0.93279124 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 1 0 4.5 1.5 2 2 1 1 41.017 41.079 3;4 3.5625000000000005E-25 10717 20230619_1886_Aki_TMTPro18x_K_F6 211.67 192.12 128120 120840 123120 142470 145430 155180 158120 170850 139190 165260 181780 191000 177060 140980 174090 189200 198870 204630 118550 110770 125950 142290 149520 156340 158180 173260 144670 167950 184400 191050 180660 149670 178540 190160 190080 194180 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 7 475190000 31059 751 29183 58331;58332;58333;58334;58335;58336 47103;47104;47105;47106;47107;47108;47109 47107 455 7 9606 Homo sapiens -0.11549784856833867 YHTSQSGDEMTSLSEYVSR Unmodified 2175.9379 0.93787661 751 A0A024RD80;P08238;B4DMA2;B4DGL0;Q9H6X9;A8K3W9 HSP90AB1 Heat shock protein HSP 90-beta yes no 0 0 0 5.2 1.17 2 1 1 1 46.413 46.479 3;4 8.9664E-61 13395 20230619_1883_Aki_TMTPro18x_K_F4 306.11 276.38 276980 220140 292040 289180 310130 362980 335580 359580 338060 347840 354340 399810 394960 291230 356010 386800 391600 430560 256190 202130 295710 287350 321430 361240 337090 367140 345070 353580 364910 399740 399660 309290 364840 389490 374610 408340 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 884980000 31060 751 29183 58337;58338;58339;58340;58341 47110;47111;47112;47113;47114 47111 5 9606 Homo sapiens -0.10305480994202298 YHTVNGHNCEVR Unmodified 1484.6579 0.6578942 640 P09651;A0A7I2V3R8;P09651-2;A0A024RAZ7;F8W6I7;A0A024RB53;P09651-3;A0A7I2V3W0;Q6IPF2;Q9BSM5;A0A024RC46;Q0VAC0;A0A7I2V2L6;A0A7I2YQX9;F8VZ49;A0A2R8Y4L2;F8VTQ5;H0YH80;Q3MI39;A0A7I2V334;A0A7I2V5H0 HNRNPA1;HNRPA1;hCG_2020860 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed no no 0 0 0 5 0.707 1 2 1 23.086 23.146 4 5.1256E-07 3776 20230619_1883_Aki_TMTPro18x_K_F4 135.6 120.06 208080 186690 342230 298900 380580 460580 323420 391800 294120 247960 362200 373230 246960 244990 396240 203650 451770 297960 193550 171740 336830 294640 390580 451530 328950 400910 303700 262010 363760 368750 263100 254620 402200 211270 430650 282570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 979370000 31061 640 29184 58342;58343;58344;58345 47115;47116 47115 2 9606 Homo sapiens -0.06504843173206609 YHVVSGADDYTVK Unmodified 1452.6885 0.68850885 3028 H0Y8P4;Q8TED0;Q8TED0-3 UTP15 U3 small nucleolar RNA-associated protein 15 homolog yes no 0 0 0 5 0 1 44.234 44.313 3 0.0022232 11323 20230619_1885_Aki_TMTPro18x_K_F5 72.497 67.218 34783 26288 34279 43339 44349 50628 43587 45676 55981 48427 60215 59482 56293 55490 49434 59969 62657 60320 32144 24207 35075 42419 45281 50497 44375 47078 56459 49156 61392 59770 57314 57563 51176 60188 59806 57297 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72274000 31062 3028 29185 58346 47117 47117 1 9606 Homo sapiens -0.01972786307169372 YHYLGGR Unmodified 864.42424 0.42423608 2564 B4DP80;Q8NCW5;Q8NCW5-2;A0A7P0TAG8 APOA1BP NAD(P)H-hydrate epimerase yes no 0 0 0 2 0 1 33.574 33.632 2 0.035467 7126 20230619_1881_Aki_TMTPro18x_K_F2 92.785 79.577 27909 13214 26311 23553 34602 35635 27893 33590 33794 31037 35059 35099 35722 29108 30519 30375 39452 37020 25726 12211 26961 23086 35099 35055 28716 34356 34148 31627 35934 35241 36188 30306 31615 30878 37644 35100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12542000 31063 2564 29186 58347 47118 47118 1 9606 Homo sapiens -0.013399067596992609 YIAEAVASIVEAK Unmodified 1362.7395 0.73948179 4541 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 yes yes 0 0 0 4.5 3.5 1 1 65.032 65.042 3 0.0012991 20547 20230619_1880_Aki_TMTPro18x_K_F1 81.431 63.271 22491 17223 20914 19244 17170 23487 21811 19402 24285 21921 25481 26407 28234 21510 23188 27351 24450 29273 20777 15791 21315 19332 18296 23328 21802 20180 24636 22163 26210 26444 28469 22670 23762 27486 23414 27765 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 34974000 31064 4541 29187 58348;58349 47119;47120 47119 2 9606 Homo sapiens 0.07262162737674771 YIAIASTTVETTDPEK Unmodified 1737.8673 0.86726108 1080 A0A0S2Z3X8;P31150;B4DHX4;B4E070 GDI1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 4.33 1.25 1 1 1 56.645 56.684 3 5.1967E-08 16915 20230619_1883_Aki_TMTPro18x_K_F4 92.265 72.687 163330 149540 180180 178530 156180 157360 138180 160900 184030 223360 208940 229400 230740 213430 192440 224080 244950 238920 151260 137100 181190 177700 163570 160910 142000 165790 186160 222500 214250 231910 233140 221200 199430 225770 233820 226790 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 486300000 31065 1080 29188 58350;58351;58352 47121;47122;47123;47124 47121 4 9606 Homo sapiens 0.027842137503967024 YIAIVSTTVETK Unmodified 1323.7286 0.72858275 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q8TB95;B3KVE3 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 0 8 0 1 59.073 59.114 3 0.00012484 17427 20230619_1888_Aki_TMTPro18x_K_F8 107.85 82.288 67978 53314 61625 74514 54403 70803 64843 69900 86738 79781 72710 88854 97626 86477 70230 108470 111010 152250 62792 48987 63108 73428 57499 71814 65467 71747 86591 80405 76431 89703 97628 90511 74370 110940 106100 144000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 42972000 31066 2533 29189 58353 47125 47125 1 9606 Homo sapiens 0.07966760363410685 YIAIVSTTVETKEPEK Unmodified 1806.9615 0.96149581 2533 Q6IAT1;B4DLV7;P50395;P50395-2;Q8TB95;B3KVE3 GDI2 Rab GDP dissociation inhibitor beta yes no 0 0 1 7 1 1 1 56.657 56.722 3;4 7.4214E-06 16741 20230619_1886_Aki_TMTPro18x_K_F6 115.82 92.14 128930 117590 128780 115830 119500 125320 126430 115300 135610 151830 160910 136140 161860 119430 149270 148660 131680 146440 119310 107620 130590 117360 124990 125880 127410 119480 138720 150990 163780 138410 164380 125400 151040 148810 126260 139060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 380170000 31067 2533 29190 58354;58355 47126;47127 47126 2 9606 Homo sapiens 0.09029352572542848 YIANTVELR Unmodified 1077.5819 0.58185893 1878 B2RE46;A0A994J5J1;P04844-2;P04844;B4DJL0 RPN2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 0 0 6.5 0.5 1 1 48.212 48.295 2 6.7235E-06 12770 20230619_1887_Aki_TMTPro18x_K_F7 180.44 107.18 685880 575420 648700 716400 719500 879240 817240 841440 971870 831850 884490 917390 945340 753110 881700 886190 933210 931200 634030 527940 663730 713990 745280 875570 823040 861790 977470 844010 914530 921810 959560 789570 900540 890980 892380 883990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 913710000 31068 1878 29191 58356;58357 47128;47129 47129 2 9606 Homo sapiens 0.046171279889904326 YIASTQRPDGTWR Unmodified 1549.7637 0.76373948 4418 Q9BRP8-2;Q9BRP8 WIBG Partner of Y14 and mago yes no 0 0 1 2 0 1 41.228 41.305 3 7.0241E-05 10393 20230619_1881_Aki_TMTPro18x_K_F2 111.63 91.207 152100 127830 155030 143060 184330 213260 189340 206140 248180 205590 226020 207700 225340 189280 203310 243050 238450 231230 140690 117160 157640 144220 189440 210140 192440 210910 248490 207970 232760 210300 228990 198700 209280 242600 227750 219780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143790000 31069 4418 29192 58358 47130 47130 1 9606 Homo sapiens 0.010848159439319716 YIAVSFVDP Unmodified 1009.512 0.51204804 2219 B4DGN8;B2R5M9;Q02809;Q02809-2;B4DHT1 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 yes no 0 0 0 6 0 1 64.234 64.28 2 0.0051409 20033 20230619_1886_Aki_TMTPro18x_K_F6 99.171 79.693 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31070 2219 29193 58359 47131 47131 1 9606 Homo sapiens 0.0076724932038132465 YICDNQDTISSK Unmodified 1442.6348 0.63475872 2776 CON__P02769 yes yes 0 0 0 4.5 0.5 2 2 46.396 46.456 2;3 1.3308E-23 12354 20230619_1883_Aki_TMTPro18x_K_F4 292.59 138.62 + 63234 148710 189820 69399 529860 608000 264660 256170 458650 144910 159710 204260 100440 125260 148840 139840 218740 283290 60124 135250 186730 83736 516620 565890 287780 282500 443630 155210 175640 201860 107240 132600 154330 148280 209060 267320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1662299999.9999998 31071 2776 29194 58360;58361;58362;58363 47132;47133 47132 2 9606 Homo sapiens -0.06885326801193514 YICPHAPR Unmodified 1012.4913 0.49126979 1166 Q5QPQ1;A0A140VJC9;O95372;Q5QPQ3;Q5QPQ2;Q5QPN5;Q5QPN9 LYPLA2 Acyl-protein thioesterase 2 yes no 0 0 0 7.5 0.5 1 1 33.96 33.999 3 0.00055751 7101 20230619_1888_Aki_TMTPro18x_K_F8 128.86 97.489 51395 30864 55861 55030 71225 66399 58164 70053 58501 44457 61106 55730 44440 39592 52217 44202 63937 47387 47479 28482 56578 53714 72297 66346 59467 70592 59622 46631 61822 55556 46279 41601 53556 44556 60946 45035 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37065000 31072 1166 29195 58364;58365 47134 47134 1 9606 Homo sapiens -0.014476195402721714 YIDDEDLDR Unmodified 1152.4935 0.49349744 2060 A8K4Z6;Q9BRD0;Q9BRD0-2 BUD13 BUD13 homolog yes no 0 0 0 1 0 1 45.851 45.851 2 8.3451E-06 12643 20230619_1880_Aki_TMTPro18x_K_F1 195.17 163.94 78114 62864 64799 72415 78109 96436 82057 75631 92591 98032 100390 93773 103250 85712 84592 113810 104310 106890 72120 57642 67196 72649 80309 95204 82816 79300 94085 97765 102690 95165 104400 90173 87600 113440 99627 101590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56306000 31073 2060 29196 58366 47135 47135 1 9606 Homo sapiens -0.07664957112160664 YIDDKDVFQK Unmodified 1269.6241 0.62411768 964 Q13617-2;Q13617;A0A0A0MTN0;A0A8I5QJI3;A0A8I5KYP8;A0A140VKB1;A0A8I5KUA9;A0A8I5KQQ5;Q5T2B5;A0A8I5KU22;A0A0D9SET6;A0A8I5KVR3;B7Z1Y1 CUL2 Cullin-2 yes no 0 0 1 6 0 1 51.929 52.006 3 0.049652 14773 20230619_1886_Aki_TMTPro18x_K_F6 63.694 39.866 87674 74230 96508 97164 100490 103430 112490 94846 92058 100100 118060 79086 74954 61851 123930 60879 60157 59189 81154 68137 97366 96318 104220 103930 112100 97681 95950 100210 117850 80715 80075 64347 121300 61322 58168 56239 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38055000 31074 964 29197 58367 47136 47136 1 9606 Homo sapiens 9.058606701728422E-05 YIDQEELNK Unmodified 1150.5506 0.55061839 751;3177;4018 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q14568;A0A024RD80;P08238;B4DMA2;B4DGL0;Q6PK50;Q58FF8 EL52;HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 no no 0 0 0 4 1.78 1 2 2 2 2 2 1 48.354 48.419 2;3 4.3289E-05 13384 20230619_1882_Aki_TMTPro18x_K_F3 192.32 102.78 1767800 1368100 1440800 1560300 1805700 1851200 1719600 1736700 2166600 2194800 2289000 1723700 1509700 2502400 1309000 3361100 1419900 2027900 1631600 1254500 1496700 1564000 1844800 1848100 1752700 1793600 2186700 2180800 2304000 1802900 1564400 2593600 1352900 3283200 1361700 1938000 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 40628000000 31075 3177;751;4018 29198 58368;58369;58370;58371;58372;58373;58374;58375;58376;58377;58378;58379 47137;47138;47139;47140;47141;47142 47139 6 9606 Homo sapiens -0.018634898357504426 YIDSADLEPITSQEEPVR Unmodified 2060.9902 0.99022976 3468 P17812;A0A3B3IRI2;B4E1E0;A0A8Q3WKZ7;B4DMB5;P17812-2;A0A8Q3WL40;A0A3B3IRQ8;A0A3B3ITF6 CTPS1 CTP synthase 1;CTP synthase yes no 0 0 0 2 0.816 1 1 1 57.438 57.454 3 8.0581E-31 17556 20230619_1881_Aki_TMTPro18x_K_F2 237.59 220.01 92881 78489 88366 89788 73578 99389 88171 86232 96869 108800 107500 111850 129830 102930 110910 121490 112030 132390 85867 71951 89943 89893 78147 99451 88369 89622 98700 108840 110800 113100 130830 107510 113240 122370 107310 125550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 536220000 31076 3468 29199 58380;58381;58382 47143;47144;47145 47145 3 9606 Homo sapiens 0.002174254110286711 YIDTEHGGSQAR Unmodified 1332.6058 0.60584185 2974 F5H365;Q15436;B4DSQ5;B4DF60;Q15436-2 SEC23A Protein transport protein Sec23A yes no 0 0 0 3.67 1.7 1 1 1 31.053 31.129 3 1.056E-13 6039 20230619_1882_Aki_TMTPro18x_K_F3 205.49 159.89 45525 30092 50882 46777 67481 66615 60697 66825 72108 55607 73352 68768 67246 58653 58020 56641 78052 75899 42086 27706 51461 46123 68532 65849 61961 67914 72793 57221 74887 68894 68413 60747 60255 58037 74471 71893 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142310000 31077 2974 29200 58383;58384;58385 47146;47147 47146 2 9606 Homo sapiens -0.04715683315271235 YIEACAR Unmodified 881.40654 0.40653711 3284 O60701;O60701-3;Q9NQ81;E7ER83;E7ETF4;E7EV97 UGDH;GDH UDP-glucose 6-dehydrogenase yes no 0 0 0 4.5 0.5 1 1 37.467 37.536 2 0.046001 8509 20230619_1885_Aki_TMTPro18x_K_F5 88.029 71.102 41930 32831 48355 46099 60880 69486 60234 62632 70362 52851 61673 66317 65926 53392 58065 48424 73500 62061 38810 30169 48772 45763 62236 68302 61078 64170 70708 54376 63900 66242 66774 55263 59970 49546 70096 58844 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164960000 31078 3284 29201 58386;58387 47148 47148 1 9606 Homo sapiens -0.038909900768885564 YIEIFPSRR Unmodified 1179.64 0.64004252 753 A0A024RD99;B7Z2D8;B7Z5F9;B3KP14;H0Y8R1;B7Z3R7;H0YAK1;B3KW50;Q12849-5;Q12849 GRSF1 G-rich sequence factor 1 yes no 0 0 1 4.5 0.5 1 1 48.458 48.515 3 0.00027406 13323 20230619_1883_Aki_TMTPro18x_K_F4 121.64 102 58232 52570 55403 60910 53076 61759 61876 63226 70602 54387 64693 52302 51920 43773 63850 57971 56917 52074 53859 48185 56519 60852 55589 62421 62158 64259 71111 55396 66034 52970 53953 46180 64302 57720 54491 49541 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44348000 31079 753 29202 58388;58389 47149 47149 1 9606 Homo sapiens 0.05740809634266952 YIEMQHFR Oxidation (M) 1138.523 0.52296385 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5;E7EWK3 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 1 0 6 0 1 36.895 36.963 3 0.0011238 8319 20230619_1886_Aki_TMTPro18x_K_F6 114.28 92.833 37857 37961 40086 43240 49987 52601 47921 46141 60852 29201 34401 28396 30697 26435 41187 26906 30627 22321 35071 34777 40702 43359 51074 52343 48810 47139 60098 30465 36361 28830 31948 27350 41032 26829 29349 21280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89647000 31080 4503 29203 58390 47150 47150 2798 1 9606 Homo sapiens -0.04075671576970308 YIEMQHFR Unmodified 1122.528 0.52804923 4503 Q9H2U1-3;Q9H2U1-2;Q9H2U1;B7Z8P5;E7EWK3 DHX36 ATP-dependent RNA helicase DHX36 yes no 0 0 0 7.5 0.5 1 1 43.2 43.244 3 0.00048267 10741 20230619_1888_Aki_TMTPro18x_K_F8 134.15 96.997 53366 42835 47968 58449 52333 60764 63888 57584 72933 41184 45727 47896 46987 48364 56749 44733 51316 51964 49299 39345 49319 57748 54363 61172 63980 58649 72588 42777 48299 48343 48445 49651 57166 45463 49156 49277 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70843000 31081 4503 29203 58391;58392 47151 47151 1 9606 Homo sapiens -0.02831367714361477 YIESPVLFLR Unmodified 1235.6914 0.69140938 307 A0A024R4U3;Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 yes no 0 0 0 1.5 0.5 1 1 62.699 62.704 2 0.00013547 19843 20230619_1881_Aki_TMTPro18x_K_F2 141.2 87.228 302790 231750 268850 287510 272770 380570 295200 283290 318040 302760 320890 318280 304580 279230 314180 331330 317550 353050 279600 212700 276190 286900 284350 375320 297090 296680 322800 305530 328440 321140 311960 292020 319610 333290 304040 334970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 280320000 31082 307 29204 58393;58394 47152 47152 1 9606 Homo sapiens 0.08299133608329612 YIETSELCGGAR Unmodified 1354.6187 0.61871473 3212;3213 O00429-6;O00429;O00429-3;D3DUW5;F8VUJ9;O00429-5;D3DUW6;B4DYR6;A0A8V8TQT5;A0A994J3G5;A0A994J696;O00429-7;H0YI79;A0A994J6A0;O00429-2;O00429-8;O00429-4;O00429-9;F8VZ52;D3DUW7;A0A994J6L8;A0A994J3M8;A0A994J402;Q32Q67 DNM1L Dynamin-1-like protein no no 0 0 0 3.5 0.5 1 1 46.402 46.463 2 5.3715E-18 12535 20230619_1882_Aki_TMTPro18x_K_F3 238.63 206.31 210830 173670 215380 277090 242500 290980 258510 258240 300860 273690 283320 301030 324020 261100 248700 331500 343140 363090 194990 159810 219230 271250 250370 292230 261020 266570 303400 276680 293340 303050 325830 274490 259890 333490 327540 344450 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 232940000 31083 3212;3213 29205 58395;58396 47153;47154;47155 47154 3 9606 Homo sapiens -0.04440988247415589 YIFDLFYK Unmodified 1107.5641 0.56408361 3574 P41223;P41223-2 BUD31 Protein BUD31 homolog yes no 0 0 0 3.5 0.5 1 1 65.088 65.11 3 0.066866 20600 20230619_1882_Aki_TMTPro18x_K_F3 46.426 28.694 5242.3 4939.8 6105.2 5820.1 6106.8 7098.4 6592.2 5920.1 7193.5 4705 5094.5 6180 7036.5 6106.2 7230.5 5423.6 5894.2 7222.7 4858.6 4527.8 6129.1 5823 6356.3 7053.4 6635.8 6100.3 7204.8 4871.9 5421.7 6201.7 7128.9 6266.6 7265.2 5568.4 5661.6 6836.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12762000 31084 3574 29206 58397;58398 47156 47156 1 9606 Homo sapiens 0.014604127341272033 YIGENLQLLVDRPDGTYCFR Unmodified 2428.1845 0.18452967 4698 Q9Y221;J3QLW7;B3KM49;Q9Y221-2 NIP7 60S ribosome subunit biogenesis protein NIP7 homolog yes no 0 0 1 8 0 1 61.942 61.97 3 2.4931E-16 18602 20230619_1888_Aki_TMTPro18x_K_F8 162.92 108.7 93089 72918 93306 95012 89004 110710 108970 108940 115910 100790 103390 119280 114640 102150 117450 130710 121100 125680 86056 66949 94737 94345 93410 110670 108930 111200 117160 102870 107310 119680 116830 107400 119660 130580 115860 119410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 64836000 31085 4698 29207 58399 47157 47157 1 9606 Homo sapiens 0.02756478295304987 YIGESAR Unmodified 794.39227 0.39226725 896 V9HW24;A0A087X2I1;P62333;H0YJC0;H0YJX2;H0YJS8 HEL-S-73;PSMC6 26S protease regulatory subunit 10B yes no 0 0 0 4 0.816 1 1 1 35.091 35.156 2 0.019071 7637 20230619_1882_Aki_TMTPro18x_K_F3 106.42 23.128 279200 157990 309800 316070 387730 402850 334420 357710 387350 311900 412910 422770 385730 346520 392480 193240 440790 398040 257910 146100 313320 307050 394920 399500 342070 367290 392330 321160 421370 421160 394970 352040 400480 208840 420980 376040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 398560000 31086 896 29208 58400;58401;58402 47158 47158 1 9606 Homo sapiens -0.013153192335266795 YIGTGHADTTK Unmodified 1162.5619 0.56185177 4458 Q9BWJ5 SF3B5 Splicing factor 3B subunit 5 yes yes 0 0 0 6 0.816 1 1 1 36.364 36.438 3 4.071E-09 8123 20230619_1886_Aki_TMTPro18x_K_F6 178.71 162.46 186610 83058 170340 199420 252740 304440 230360 230830 291870 221520 286470 330260 302350 278780 245630 155370 356060 327620 171940 77167 175860 192860 255750 297860 235390 240640 293390 227900 295090 328160 305620 282850 256310 168110 339410 309460 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 394650000 31087 4458 29209 58403;58404;58405 47159;47160 47159 2 9606 Homo sapiens -0.012926677416317034 YIHLENLLAR Unmodified 1240.6928 0.69280637 1896 A0MNN4;Q2TAY7 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes no 0 0 0 2 0 1 55.225 55.246 3 3.6615E-10 16672 20230619_1881_Aki_TMTPro18x_K_F2 207.83 155.15 60336 48810 52423 55508 49627 61905 61906 60701 65091 63086 67273 60423 68613 58929 71082 71016 64312 69396 55727 44748 53900 55607 52168 62078 61811 62158 66209 63556 68952 61456 70093 61476 71867 71084 61634 65911 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 320430000 31088 1896 29210 58406 47161 47161 1 9606 Homo sapiens 0.08208767697101393 YIHPDDELVLEDELQR Unmodified 1982.9585 0.9585357 836 A0A8V8TPA1;B4DP28;A0A8V8TMJ0;A0A8V8TMJ5;H7C1B3;C9JLE1;A0A8V8TPA6;A0A087WWF6;P49005;C9IZD2;A0A8V8TMK0;A0A8V8TN07;A0A8V8TNY7;A0A8V8TPB6 POLD2 DNA polymerase delta subunit 2 yes no 0 0 0 1 0 1 56.231 56.231 3 5.9017E-06 16943 20230619_1880_Aki_TMTPro18x_K_F1 110.57 92.434 30540 26605 29334 32080 31686 34942 32798 35396 39775 37578 38194 34738 38209 33161 40764 43284 33591 41277 28242 24398 29951 31988 32768 35129 33230 36177 40064 37779 39248 35368 39113 34792 41029 43214 32263 39199 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22857000 31089 836 29211 58407 47162 47162 1 9606 Homo sapiens 0.006374774477308165 YIIEELNVR Unmodified 1147.6237 0.62372375 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;B4DVX2;Q7L4K8 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 0 5.5 0.5 1 1 57.83 57.894 2 1.9885E-05 17011 20230619_1885_Aki_TMTPro18x_K_F5 168.66 42.093 254760 208080 227760 246370 202190 249280 240550 237270 258560 295040 300470 324000 310010 266250 325170 344780 309840 356350 235360 190830 233360 245730 213340 251560 240980 244830 264230 295870 306980 325610 316790 280690 329670 345800 296920 338170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 215530000 31090 1736 29212 58408;58409 47163;47164 47163 2 9606 Homo sapiens 0.05581683677496585 YIIIGDMGVGK Unmodified 1164.6213 0.62128091 492 A0A024R845;P61106;X6RFL8;A0A994J4B9;A0A994J774 RAB14 Ras-related protein Rab-14 yes no 0 0 0 1.5 0.5 1 1 61.748 61.753 3 0.069822 19222 20230619_1880_Aki_TMTPro18x_K_F1 41.283 14.769 24395 22969 28976 28286 28077 31731 32125 29073 29244 28168 24416 26399 30791 22569 34395 35135 26311 30082 22613 21063 29040 28178 29322 31763 32067 29870 29781 28462 25594 26762 31364 24082 34472 34820 25278 28612 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 196280000 31091 492 29213 58410;58411 47165 47165 1 9606 Homo sapiens 0.045555119482060036 YIIIGDTGVGK Unmodified 1134.6285 0.62847478 473;4277 A0A024R7V6;P61019;A0A0A1HAW1;E9PKL7;H0YD31;E9PE37;Q8WUD1;A0A3B3ITL1;Q5HYI5 RAB2;RAB2A;RAB2B;DKFZp313C1541 Ras-related protein Rab-2A;Ras-related protein Rab-2B no no 0 0 0 5.75 2.77 1 2 1 57.511 57.547 2;3 6.9486E-17 17493 20230619_1880_Aki_TMTPro18x_K_F1 233.46 168.23 380950 317360 342190 378230 310490 326310 341800 360260 359230 439230 413030 433930 475920 399260 375590 524520 494280 550700 352000 291050 350510 376380 325800 334820 343600 367850 367630 439290 424060 439640 479020 419730 391090 526040 472170 522570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 222020000 31092 473;4277 29214 58412;58413;58414;58415 47166;47167;47168 47166 3 9606 Homo sapiens 0.06654567820282864 YILSDSSPAPEFPLAYLTSENR Unmodified 2469.2064 0.20637055 1220 A0A1B0GV75;A0A1B0GTB8;A0A1B0GWC0;A0A140VK13;A0A1B0GVF3;P23786;Q53G79 CPT2 Carnitine O-palmitoyltransferase 2, mitochondrial yes no 0 0 0 7.5 0.5 1 1 64.68 64.704 3 3.2498E-23 19975 20230619_1887_Aki_TMTPro18x_K_F7 172.55 158.65 30763 29397 34914 41660 34990 36779 35813 37004 41717 44842 49671 49023 49259 49424 48013 51702 104850 61156 28507 26997 35159 40982 36340 37567 36265 38012 42495 45027 50569 49600 50357 51071 51976 52439 99464 58147 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 92653000 31093 1220 29215 58416;58417 47169;47170 47169 2 9606 Homo sapiens 0.030535615249391412 YIMVPSGNMGVFDPTEIHNR Unmodified 2276.0718 0.071808095 1979 A6NLH6;Q53HE6;Q9P003 CNIH4 Protein cornichon homolog 4 yes no 0 0 0 1 0 1 61.188 61.188 3 1.296E-36 18947 20230619_1880_Aki_TMTPro18x_K_F1 223.5 205.36 21307 19680 24119 27022 23937 25094 29278 26719 27718 27530 25764 27988 33637 27889 28397 31390 37893 33990 19739 18069 24284 26656 24990 25558 29158 27220 28263 27793 26890 28387 33839 28967 29505 31625 36137 32271 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 77947000 31094 1979 29216 58418 47171 47171 1 9606 Homo sapiens -0.015184937023150269 YIMVPSGNMGVFDPTEIHNR 2 Oxidation (M) 2308.0616 0.061637339 1979 A6NLH6;Q53HE6;Q9P003 CNIH4 Protein cornichon homolog 4 yes no 0 2 0 7.5 0.5 1 1 54.441 54.506 3 1.2733E-11 15540 20230619_1887_Aki_TMTPro18x_K_F7 134.93 126.84 40546 29889 38696 44880 51252 46392 50803 42087 56957 34090 41849 42662 42040 30355 51412 42699 42398 48034 37455 27493 39681 44084 52154 46709 51399 43125 56996 35184 43690 42526 43307 32398 51570 43032 40693 45546 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 150530000 31095 1979 29216 58419;58420 47172;47173 47172 1250;1251 2 9606 Homo sapiens -0.040071014275781636 YIMVPSGNMGVFDPTEIHNR Oxidation (M) 2292.0667 0.066722717 1979 A6NLH6;Q53HE6;Q9P003 CNIH4 Protein cornichon homolog 4 yes no 0 1 0 8 0 2 57.86 57.909 3 6.9385E-37 17329 20230619_1888_Aki_TMTPro18x_K_F8 229.4 219.02 106420 97954 127220 123490 112680 125540 130090 127730 129850 147750 112140 120870 155250 114510 126460 184480 144180 147200 98639 89852 127270 122670 118580 126850 130190 130870 131810 147390 117840 123770 155630 122080 130400 181980 137800 140200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 284020000 31096 1979 29216 58421;58422 47174;47175 47175 1250;1251 2 9606 Homo sapiens -0.027627975649011205 YINENLIVNTDELGR Unmodified 1761.8897 0.88972785 3470 P17987;E7ERF2;F5H136;F5H7Y1 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 4.5 0.5 1 1 59.751 59.803 2 5.5227E-49 18283 20230619_1883_Aki_TMTPro18x_K_F4 266.74 227.59 28525 16825 20901 25140 22179 28219 24950 23260 24977 30320 29377 26966 29768 26811 26513 36399 32921 33746 26272 15492 21914 24726 23056 28169 24999 24299 25647 30161 29935 27543 30230 28162 27427 36243 31442 32078 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7675900 31097 3470 29217 58423;58424 47176;47177 47176 2 9606 Homo sapiens 0.039258579386796555 YINTEHGGSQAR Unmodified 1331.6218 0.62182627 1375 B4DRA5;B4DJW8;A0A2R8YFH5;Q15437;Q5QPE1;B4DS04 SEC23B Protein transport protein Sec23B yes no 0 0 0 4 0.816 1 1 1 29.005 29.087 3 6.2428E-18 5413 20230619_1885_Aki_TMTPro18x_K_F5 225.19 195.43 28547 15428 34552 38029 44701 47808 43002 41237 42318 35041 41481 50419 43055 33392 37067 23144 46075 50665 26386 14324 34776 36622 45541 47406 43432 42429 43099 36214 42728 49835 43589 34514 38214 25008 44029 47813 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 47911000 31098 1375 29218 58425;58426;58427 47178;47179 47179 2 9606 Homo sapiens -0.030719770783889544 YINVGDLAR Unmodified 1019.54 0.53999412 822 A0A087WVD7;Q9Y3D8-2;Q9Y3D8;A0A087WY94 TAF9;AK6 Adenylate kinase isoenzyme 6 yes no 0 0 0 8 0 1 52.221 52.298 2 0.00064766 14513 20230619_1888_Aki_TMTPro18x_K_F8 128.36 80.513 317870 255370 288920 320010 299900 356000 320040 312710 351690 359190 333130 311580 373440 275510 317140 396820 367130 357950 293670 234350 296280 318280 311470 356210 322540 323710 355970 359090 344270 317410 376950 292000 326670 394380 350720 340430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144710000 31099 822 29219 58428 47180;47181 47181 2 9606 Homo sapiens 0.031005723004682295 YIPFTHGK Unmodified 961.50215 0.50215205 3238 Q5T094;Q9P0H9;O15258;Q6IBJ7 RER1 Protein RER1 yes no 0 0 0 3.5 0.5 1 1 45.982 46.042 3 0.00045524 12359 20230619_1882_Aki_TMTPro18x_K_F3 139.88 110.54 212360 184240 194850 235870 218960 276420 284180 279960 302780 252820 293060 248980 287000 260430 269900 300040 290690 329740 196300 169060 200120 234430 227550 276380 283230 285000 306750 256960 300590 253650 292420 270360 276080 302440 278200 312730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 436850000 31100 3238 29220 58429;58430 47182 47182 1 9606 Homo sapiens 0.019861061056758444 YIPPHLR Unmodified 894.50757 0.50757178 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;F6S8Q4;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;B4E132;B4E3C4;O15523-3;C9J081;A0A2R8Y650;A0A2R8YCU0;A0A2R8YF89;B4DLA0;C9J8G5;A0A087WX09;A0A2R8Y770 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 2 0 1 37.943 38.006 3 0.0029335 8897 20230619_1881_Aki_TMTPro18x_K_F2 118.06 37.679 43385 36180 43877 48435 47656 45288 46349 50277 41641 49230 57546 52271 60284 49115 49849 59480 60188 54612 40126 33221 44603 47864 49086 46163 46704 50990 43356 49873 58374 52866 60927 51316 51494 59309 57448 51942 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 65124000 31101 1018 29221 58431 47183 47183 1 9606 Homo sapiens 0.056098296881373244 YIPQQDALEDK Unmodified 1318.6405 0.64049603 1390 A0A2X0TVY0;C9JME2;Q9Y4F1;Q9Y4F1-2;A0A1B0GV68;M0QYB0;M0R262 FARP1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 0 0 0 3 0 1 50.926 50.997 2 0.047479 14615 20230619_1882_Aki_TMTPro18x_K_F3 75.294 43.922 16264 12619 13692 13217 14428 16998 13127 13970 17805 20279 22729 22633 27370 19804 16523 23988 23471 22136 15014 11562 14130 13355 14918 16836 13466 14645 18085 20228 23273 22776 27249 20754 17416 23914 22380 21049 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30099000 31102 1390 29222 58432 47184 47184 1 9606 Homo sapiens -0.006078602272054923 YIQAACK Unmodified 852.41637 0.41637351 826 Q00610;A0A8V8TQ14;Q00610-2;A0A087WVQ6;K7EJJ5;A0A8V8TR47;A0A8V8TRF0;A0A8V8TQK1;A0A8V8TRE8;A0A8V8TQK3;A0A8V8TQ18;A0A087WX41;P53675-2;P53675 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain;Clathrin heavy chain 2 yes no 0 0 0 1 0 1 42.483 42.483 2 0.0073036 11191 20230619_1880_Aki_TMTPro18x_K_F1 126.24 96.436 83044 51390 84268 80579 169930 289300 127330 148650 230770 17798 21212 32518 31650 26919 41616 19755 33416 26959 76681 47334 86912 81512 169620 273050 133840 157850 220220 26015 32160 32223 32551 27571 41561 20449 32007 25553 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34325000 31103 826 29223 58433 47185 47185 1 9606 Homo sapiens -0.01573802071504815 YIQDFQR Unmodified 968.47158 0.4715802 2929 E9PKP7;P17480-2;P17480;A0A994J4N4;A8K962;B4DNQ1;O00164;Q05BZ1;E9PMM2 UBTF Nucleolar transcription factor 1 yes no 0 0 0 6 0 1 45.242 45.331 2 0.055472 11817 20230619_1886_Aki_TMTPro18x_K_F6 83.753 51.282 404190 355830 393230 375230 505400 585910 503680 460920 645510 274720 314620 283530 321300 246740 405300 297790 353240 327750 373840 325900 402030 380230 516500 573600 511880 474530 635160 288760 338670 286540 331650 258620 407170 300460 338310 311080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 404980000 31104 2929 29224 58434 47186 47186 1 9606 Homo sapiens -0.013916722793851477 YIQEAEMLR Unmodified 1151.5645 0.56449431 958 A0A0A0MSZ9;Q05048;B4DDG3 CSTF1 Cleavage stimulation factor subunit 1 yes no 0 0 0 4 0 1 52.087 52.111 2 0.012428 14943 20230619_1883_Aki_TMTPro18x_K_F4 80.755 19.845 183240 156980 175020 181890 172760 212230 203300 195840 245500 215610 217510 224940 224540 187720 205420 242720 232570 227010 169420 143910 178520 182080 180690 211900 204490 201740 246520 217190 224830 226690 228050 197760 210930 242050 222220 215800 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73854000 31105 958 29225 58435 47187 47187 1 9606 Homo sapiens -0.0052253560832014045 YIQELWR Unmodified 1006.5236 0.52361577 210 A0A024R2Q4;P61313;A0A2R8YEM3;E7EQV9;E7ENU7;B4DLP4;E7EX53;A0A2R8Y738;P61313-2;B4DEN1 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 0 0 0 4.5 3.04 1 1 1 1 57.313 57.344 2 0.0041821 17381 20230619_1880_Aki_TMTPro18x_K_F1 147.83 99.327 1088800 993270 1057600 1108300 949540 1195600 1182600 1184500 682810 1234700 702440 687130 1391100 853540 753820 1762800 771240 1172600 1007200 910070 1075800 1111400 1000900 1202000 1164100 1211800 728760 1227200 749700 729790 1365300 924240 784530 1720400 740530 1118500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1323200000 31106 210 29226 58436;58437;58438;58439 47188;47189 47188 2 9606 Homo sapiens 0.020614911343727726 YIQHTYR Unmodified 979.48756 0.48756462 3634 V9HWE8;P52565;J3KTF8;J3QQX2;J3QW41;A0A0S2Z3D9;J3KRY1;P52565-2 HEL-S-47e;ARHGDIA Rho GDP-dissociation inhibitor 1 yes no 0 0 0 4.33 2.56 1 1 1 1 1 1 31.548 31.602 3 9.7699E-05 6326 20230619_1881_Aki_TMTPro18x_K_F2 176.41 120.91 715920 523150 595980 624610 743480 821870 744390 735200 1024900 335410 299190 231590 269590 231970 526670 283160 374190 225270 660630 480040 617810 625070 761430 814010 758450 746300 997090 358700 339890 240380 288610 241980 521200 281310 358470 215120 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 2663000000 31107 3634 29227 58440;58441;58442;58443;58444;58445 47190;47191;47192;47193;47194 47191 5 9606 Homo sapiens -0.0029996604248481162 YIQPWESEFIDSQR Unmodified 1796.837 0.836964 1863 A0A994J491;Q6P2Q9;A0A994J6E8;B4DK16 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 4 0 1 62.124 62.129 3 0.002431 19215 20230619_1883_Aki_TMTPro18x_K_F4 80.632 68.272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31108 1863 29228 58446 47195 47195 1 9606 Homo sapiens -0.029581001241012927 YIQQTKPLTLER Unmodified 1488.83 0.83002813 416 B2R6U8;A0A024R6W2;O43809;Q5HYH5 NUDT21;DKFZp313O211 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 1 2.5 0.5 1 1 46.988 47.066 3 7.1059E-05 13086 20230619_1881_Aki_TMTPro18x_K_F2 117.41 81.963 162130 173340 194320 173060 241030 218740 228610 198240 130790 111540 125570 58517 70842 42379 225210 40273 47532 35624 150450 158590 195250 175550 245580 217460 228200 201670 138540 115710 126610 61456 81042 44269 215460 40855 47113 33928 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 249510000 31109 416 29229 58447;58448 47196 47196 1 9606 Homo sapiens 0.1051663178598119 YISFEER Unmodified 942.4447 0.44469675 3098 Q53T40;I0CE67;Q6I9R8;Q2TSB7;Q2XQU9;Q14192 FHL2;AAG11 Four and a half LIM domains protein 2 yes no 0 0 0 4 0 1 48.062 48.102 2 0.029363 13099 20230619_1883_Aki_TMTPro18x_K_F4 95.541 42.378 62696 46351 69859 77907 94824 122100 91748 85532 106910 105690 115020 119680 111590 94650 95681 123150 113570 135880 57993 42698 70828 76565 96568 119170 93129 90437 108400 106190 117490 120020 113250 99981 98726 123910 108640 128840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85101000 31110 3098 29230 58449 47197 47197 1 9606 Homo sapiens -0.028827808905589336 YISKPENLK Unmodified 1090.6023 0.60226003 287;775 Q9Y376;A0A024R496;Q7Z4X0;B7ZBJ4;Q5TAW7;A0A024RDT3;Q9H9S4 CAB39;CAB39L Calcium-binding protein 39;Calcium-binding protein 39-like no no 0 0 1 2 0 1 45.875 45.957 3 0.0047059 12550 20230619_1881_Aki_TMTPro18x_K_F2 81.017 46.764 268720 193890 258600 274610 257120 269670 280980 277140 333460 322810 391500 383960 392260 357920 281700 411800 449780 404960 248210 178240 263590 270590 267800 273220 283640 283920 338940 325700 398750 386310 395370 372740 298380 412210 428410 384870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 137270000 31111 287;775 29231 58450 47198 47198 1 9606 Homo sapiens 0.060582986487816015 YISLIYTNYEAGKDDYVK Unmodified 2154.0521 0.052101735 3419 V9HWE9;P09211;C7DJS1 HEL-S-22;GSTP1 Glutathione S-transferase P yes no 0 0 1 1 0 1 61.732 61.732 3 0.065754 19227 20230619_1880_Aki_TMTPro18x_K_F1 42.813 31.869 16568 11638 18668 16772 14508 20356 16639 16099 17312 17404 18769 19279 19880 15131 21264 20942 16448 22596 15322 10702 18719 16560 15483 20198 16687 16780 17659 17577 19248 19351 20300 16063 21334 21043 15826 21422 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80841000 31112 3419 29232 58451 47199 47199 1 9606 Homo sapiens 0.021237768301489268 YISPDQLADLYK Unmodified 1424.7187 0.71874635 293 A0A024R4F1;P06733;A0A2R8Y6G6;E2DRY6;P06733-2 ENO1 Alpha-enolase;Enolase yes no 0 0 0 7.12 0.599 1 5 2 63.618 63.65 2;3 2.2995E-10 18834 20230619_1887_Aki_TMTPro18x_K_F7 231.07 191.82 8736500 7221700 8439700 9379000 7673700 9478000 9014900 9029400 8918600 11221000 10543000 9649600 10765000 9393900 10958000 12180000 11053000 12083000 8076600 6629000 8593300 9294300 8073800 9563700 9013400 9314300 9167700 11171000 10747000 9863400 10990000 9847000 11152000 12185000 10582000 11474000 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 55979000000 31113 293 29233 58452;58453;58454;58455;58456;58457;58458;58459 47200;47201;47202;47203;47204;47205;47206 47201 7 9606 Homo sapiens 0.023375723580329577 YISQCIDEIK Unmodified 1267.6118 0.61183843 1855 A0A8V8TQW4;O14617-4;O14617;O14617-5;O14617-2;Q6PK82;O14617-3 AP3D1 AP-3 complex subunit delta-1 yes no 0 0 0 6 0 1 55.855 55.929 3 0.0026907 16450 20230619_1886_Aki_TMTPro18x_K_F6 79.82 57.1 37286 26802 37142 41208 31828 41667 41646 39303 41521 43700 43619 47634 50732 44713 43553 55412 46153 54999 34450 24664 37698 40416 33785 42011 41425 40451 42408 44048 44995 48086 51221 46776 44627 55453 44195 52210 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32323000 31114 1855 29234 58460 47207 47207 1 9606 Homo sapiens -0.011263011280107094 YITGDQLGALYQDFVR Unmodified 1857.9261 0.92611336 3418 Q6FHV6;P09104;A8K3B0;P09104-2;F5H0C8;U3KQP4 ENO2 Gamma-enolase;Enolase yes no 0 0 0 3.67 3.09 1 1 1 64.448 64.458 3 3.1369999999999997E-19 19722 20230619_1888_Aki_TMTPro18x_K_F8 199.37 184.9 29908 23904 27998 28676 19773 23431 25577 25277 26617 34824 35269 39965 37179 32571 37638 37959 40908 41248 27637 21927 28479 28509 21360 24138 25509 25965 27434 34817 35903 40064 37912 34124 38446 38244 39111 39142 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 213220000 31115 3418 29235 58461;58462;58463 47208;47209 47209 2 9606 Homo sapiens 0.031467348353999114 YIVTGSGDK Unmodified 938.47091 0.4709115 1886;2343 Q04727-3;Q04727;Q04727-4;Q04727-2;A0A994J7T6;B3KQ29;Q04724;B4DEF9;B4E345;B4DE62;Q04726-3;B4E2W3;Q6PRX2;Q6PRX3;H0YL70;H0YNT2;B3KUA2;H0YNI7;B3KM67;H0YKN8;Q04726-2;Q04726-7;Q04726-6;Q04726-5;Q04726-4;Q04726;H0YKT5 TLE4;TLE1;TLE3 Transducin-like enhancer protein 4;Transducin-like enhancer protein 1;Transducin-like enhancer protein 3 no no 0 0 0 7 0 1 44.576 44.659 2 0.0016783 11186 20230619_1887_Aki_TMTPro18x_K_F7 116.05 60.334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31116 1886;2343 29236 58464 47210 47210 1 9606 Homo sapiens -0.0007851171908441756 YIYDQCPAVAGYGPIEQLPDYNR Unmodified 2701.2483 0.24825214 3533 P31930;B4DUL5 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 6.5 0.5 1 1 62.002 62.045 3 1.3536E-13 19037 20230619_1886_Aki_TMTPro18x_K_F6 138.35 131.55 62529 26914 59451 56166 44101 73389 70846 52479 67203 56582 61345 61827 52713 50938 54150 72797 65493 69350 57624 24948 60441 54483 47915 72303 69733 55226 68366 57166 62857 62193 54204 54020 55772 72549 62581 65891 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 852030000 31117 3533 29237 58465;58466 47211 47211 1 9606 Homo sapiens -0.03432206058232623 YIYDSAFHPDTGEK Unmodified 1641.7311 0.73110195 4537 Q9H9B4;D6RDG7;S4R2X2;D6RFI0 SFXN1 Sideroflexin-1 yes no 0 0 0 4.5 0.5 1 1 50.114 50.169 3 3.889E-05 13832 20230619_1885_Aki_TMTPro18x_K_F5 104.7 90.009 90864 83261 104470 118770 104510 124980 132680 130410 102910 118760 130260 136700 128690 102970 121760 127640 147580 168070 84187 76479 105120 117070 109230 125970 131250 132560 107660 121090 132370 136810 131030 108720 125400 130090 141090 159130 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 227160000 31118 4537 29238 58467;58468 47212;47213 47213 2 9606 Homo sapiens -0.0640943596959005 YKAEDEVQR Unmodified 1136.5462 0.54620171 1031 P0DMV8;P0DMV9;A0A0G2JIW1;A0A1U9X7W4;A8K5I0;P0DMV8-2;B4DFN9;B4DNT8;Q59EJ3;B4E388;B4DI39;B4DWK5;B4E1S9;B4DVU9;V9GZ37;B3KTT5;B4DNX1;B4E1T6 HSPA1A;HSPA1B;HEL-S-103 Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B no no 0 0 1 3 0.816 1 1 1 34.819 34.875 3 0.085061 7509 20230619_1883_Aki_TMTPro18x_K_F4 42.802 30.826 44494 32280 50091 56283 74574 81931 69245 76563 86732 67722 79770 69204 78143 63810 72343 46012 79808 69820 41156 29753 50835 55153 75384 80727 70658 78296 87028 69001 82023 69992 79509 65117 73921 47955 76218 66100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1196400000 31119 1031 29239 58469;58470;58471 47214 47214 1 9606 Homo sapiens -0.01660954258682068 YKDDPVDLR Unmodified 1119.556 0.55603811 1525 A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 0 0 1 3.5 0.5 1 1 43.002 43.057 3 0.064239 10917 20230619_1882_Aki_TMTPro18x_K_F3 48.698 30.386 200020 145030 161960 189190 219180 230410 225120 218000 231540 220250 274920 259580 282170 230240 227810 285970 257550 277330 184530 133210 168720 187920 223260 229580 226800 223640 237170 223690 280190 260950 285080 241420 234580 285830 246280 263420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 571500000 31120 1525 29240 58472;58473 47215 47215 1 9606 Homo sapiens 0.0010423374669699115 YKDGTELELK Unmodified 1194.6132 0.61321864 260 A0A024R3R5;Q14739;A0A494C1L1;C9JXK0;B4E0Z3;C9JES9 LBR Lamin-B receptor yes no 0 0 1 5.5 0.5 1 1 48.005 48.083 3 0.025932 12919 20230619_1885_Aki_TMTPro18x_K_F5 62.732 22.796 381500 317160 392930 369340 398030 418900 401560 368830 343340 451480 515490 374810 380020 280200 489300 289720 282350 208540 352890 290800 398080 369480 412720 418850 403150 382520 360200 449240 514140 380870 396620 292790 483100 287230 271640 199200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 378380000 31121 260 29241 58474;58475 47216 47216 1 9606 Homo sapiens 0.023696562323948456 YKEETIEK Unmodified 1038.5233 0.523341 3695 Q6IBH6;P61254;A0A024RBF6 RPL26;hCG_26523 60S ribosomal protein L26 yes no 0 0 1 3.6 1.02 1 1 2 1 41.501 41.563 3;4 0.010547 10205 20230619_1885_Aki_TMTPro18x_K_F5 82.287 45.73 753700 396830 811400 938510 1053700 1077500 958190 1016600 1063300 963620 1249400 1190800 1222900 1059900 1094700 640720 1340000 1172500 695820 368190 823770 903860 1071900 1076800 975240 1041400 1084200 983770 1271500 1193300 1243000 1076100 1126200 682080 1278600 1108700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3060299999.9999995 31122 3695 29242 58476;58477;58478;58479;58480 47217;47218;47219 47219 3 9606 Homo sapiens 0.005620266238793192 YKEEYAVLISEAQAIK Unmodified 1853.9775 0.97748023 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 1 8 0 1 62.358 62.383 3 8.8791E-06 18809 20230619_1888_Aki_TMTPro18x_K_F8 109.38 90.306 80474 69524 85999 94127 83440 90905 91477 84541 91372 106750 109830 107820 108080 90755 131970 120030 110510 119740 74480 63836 86909 92969 87041 92022 91796 87447 93900 106700 111800 108850 111460 95736 132530 120170 106010 113700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 843130000 31123 3881 29243 58481 47220 47220 1 9606 Homo sapiens 0.08465058809474613 YKETDLLILFK Unmodified 1381.7857 0.7857037 2662 B5BUB5;P05455;Q14730;Q9UMH6 SSB Lupus La protein yes no 0 0 1 2 0 1 62.738 62.747 3 0.00092283 19868 20230619_1881_Aki_TMTPro18x_K_F2 93.958 56.802 127120 93304 124720 118850 88747 131720 113820 91772 151300 126670 121900 118480 108890 97647 189160 93346 90689 76193 117450 85669 126350 118080 96042 131230 114460 97546 150760 126010 126020 119830 115290 101140 184970 93265 87622 72603 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 73211000 31124 2662 29244 58482 47221 47221 1 9606 Homo sapiens 0.11008227639786128 YKFENWGACDGGTGTK Unmodified 1789.773 0.77298354 2934 E9PPJ5;E9PLM6;P21741;P21741-2 MDK Midkine yes no 0 0 1 8 0 1 50.617 50.693 3 0.00046638 13810 20230619_1888_Aki_TMTPro18x_K_F8 84.375 69.903 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31125 2934 29245 58483 47222 47222 1 9606 Homo sapiens -0.09031203552740408 YKFQFNDLK Unmodified 1201.6132 0.61315906 4784 yes no 0 0 1 4.33 0.471 2 1 43.286 43.343 3 0.080488 10969 20230619_1883_Aki_TMTPro18x_K_F4 45.161 2.4177 + 412500 315360 399500 387700 459600 443570 422370 408220 552470 477910 599440 601180 542380 496050 530470 513380 666920 613980 381170 289400 407630 386400 471390 443710 432130 421440 556960 483200 610290 601090 555150 515980 547020 521360 636420 582290 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 138630000 31126 4784 29246 58484;58485;58486 47223 47223 1 9606 Homo sapiens 0.020417010230858068 YKHDYVSH Unmodified 1047.4774 0.47739386 1984 A6NNK5;Q12888;Q12888-3;Q12888-2;B3KVT9 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 0 0 1 6.5 0.5 1 1 31.863 31.926 4 0.0017547 6487 20230619_1886_Aki_TMTPro18x_K_F6 114.28 93.952 154350 38892 135060 181360 219290 168820 207970 222700 227330 172900 224430 188150 155190 137540 179800 101170 148880 94319 141960 36980 140290 170960 220260 172760 210890 222420 230090 177840 227150 188580 161720 141550 180240 102210 142360 89858 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 43384000 31127 1984 29247 58487;58488 47224;47225;47226 47224 3 9606 Homo sapiens -0.044445737677278885 YKPAVNQIECHPYLTQEK Unmodified 2217.0888 0.088838367 435 A0A024R7A8;P15121;Q59EL5;E9PCX2 AKR1B1 Aldose reductase yes no 0 0 1 4.5 3.5 1 1 47.663 47.692 4 6.6114E-30 13387 20230619_1880_Aki_TMTPro18x_K_F1 224.86 193.05 898970 788690 914900 1027600 737050 799280 858620 818290 782230 1159400 1191200 1226600 1235800 1060100 1186700 1296000 1243600 1319200 831750 723830 925940 1015000 782390 826200 857160 844460 819050 1154600 1205400 1236400 1257400 1111400 1211400 1299600 1189900 1252500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2728400000 31128 435 29248 58489;58490 47227;47228 47227 2 9606 Homo sapiens 0.028977501750887313 YKPESEELTAER Unmodified 1450.694 0.69398816 537 P07237;A0A7P0TA71;A0A7P0TA35;A0A7P0TB26;A0A024R8S5;I3L4M2;A0A7P0TA97;A0A7P0T8X1;H7BZ94;B4DUA5;A0A7P0T8C0;H0Y3Z3;B4DNL5;A0A7P0T8J3;B4DLN6;I3L3P5;A0A7P0T9K9;A0A7P0T9U6;I3L0S0;A0A7P0T9D6;I3L514;B3KTQ9 P4HB Protein disulfide-isomerase yes no 0 0 1 3 0.816 1 1 1 40.813 40.871 3 0.00025504 9952 20230619_1882_Aki_TMTPro18x_K_F3 99.498 90.784 1693600 1340500 1426100 1502300 1734800 1898400 1931500 1935400 2089800 2052300 2266500 2342000 2316300 1940100 2108800 2511300 2220100 2334300 1563700 1228900 1476300 1509700 1783200 1890700 1940800 1977300 2127000 2076400 2319800 2351400 2352300 2044300 2156500 2503500 2123900 2218600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4612500000 31129 537 29249 58491;58492;58493 47229;47230 47230 2 9606 Homo sapiens -0.013331075153246275 YKPLDLRPK Unmodified 1128.6655 0.66552898 3583 P42766 RPL35 60S ribosomal protein L35 yes yes 0 0 2 4.5 0.5 1 1 44.476 44.538 4 0.050679 11414 20230619_1885_Aki_TMTPro18x_K_F5 58.699 39.954 1239800 1111300 1177200 1308300 1280700 1514200 1412800 1482400 1484400 1183200 1054000 826870 1318300 929890 1137300 1546200 1260900 967610 1146600 1018800 1203600 1307900 1326400 1514600 1419000 1508100 1490800 1201600 1111900 861460 1327500 988700 1168600 1510300 1203200 926250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2953599999.9999995 31130 3583 29250 58494;58495 47231 47231 1 9606 Homo sapiens 0.1063428415668568 YKPLNTTPNATK Unmodified 1346.7194 0.71941505 3960 Q96QC0;Q2L6I0;Q58F28 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes no 0 0 1 4 0 1 42.347 42.39 3 0.0018343 10579 20230619_1883_Aki_TMTPro18x_K_F4 84.566 63.507 70591 49624 60987 77972 92968 107420 84944 85269 103460 79252 85770 89050 92200 74729 77331 90583 106580 85015 65143 45682 63348 76712 93909 105820 86644 88470 103600 80780 89123 89486 93206 78394 80573 90431 101540 80886 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51691000 31131 3960 29251 58496 47232 47232 1 9606 Homo sapiens 0.05992411797751629 YKPVCNQVECHPYFNQR Unmodified 2238.0099 0.0098765399 3794 Q04828;H0Y804;B4DK69;P52895;Q59GU2;S4R3P0 AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C2 yes no 0 0 1 2.5 0.5 1 1 42.295 42.366 4 1.5305E-23 10607 20230619_1882_Aki_TMTPro18x_K_F3 211.47 203.39 95854 76500 90332 162770 313300 422090 818070 1007300 583670 114060 179230 211720 154940 161400 204220 165820 187720 219040 88577 70704 96883 161080 320880 419500 787330 963150 589470 165750 202500 209560 161650 168240 205690 169670 179980 207360 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 657040000 31132 3794 29252 58497;58498 47233;47234 47234 2 9606 Homo sapiens -0.05960800330831262 YKPYEEALLQAEAPR Unmodified 1776.9046 0.90464964 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DRG9;Q15020-2 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 1 6 0 1 54.582 54.659 3 7.5277E-14 15851 20230619_1886_Aki_TMTPro18x_K_F6 175.65 154.71 273440 228840 297980 303920 270170 304340 306450 305590 321370 388280 367660 407200 416270 340240 377330 393650 425760 441310 253060 210100 300280 300760 283740 307730 307500 314350 328810 388370 377470 410000 421370 356150 387130 397350 407000 418600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 924230000 31133 1555 29253 58499 47235 47235 1 9606 Homo sapiens 0.047273498067170294 YKVPDGKPENEFAFNAEFK Unmodified 2229.0742 0.074234161 3922 Q15181;V9HWB5 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 0 2 6.67 0.471 1 2 55.694 55.759 4 1.7751E-08 16296 20230619_1887_Aki_TMTPro18x_K_F7 120.84 108.41 349020 300220 342130 383000 280150 299950 325490 317700 291910 444660 418940 356000 385640 302550 408800 347680 308860 264890 322780 275480 347380 378900 296910 310120 324820 326880 304990 439510 422090 363530 395320 316310 409430 344330 296170 252630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 256240000 31134 3922 29254 58500;58501;58502 47236;47237 47237 2 9606 Homo sapiens 0.00886001298613337 YLAADKDGNVTCER Unmodified 1610.7359 0.73586975 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 1 4 0.816 1 1 1 41.849 41.912 3 1.4979E-12 10291 20230619_1885_Aki_TMTPro18x_K_F5 192.4 177.93 492230 438070 609280 503900 709140 495670 707550 584550 312830 575260 767550 212000 199580 99624 902830 65364 79380 60426 456300 401520 609760 503900 724910 504810 701680 590900 359410 569820 738810 229020 253330 105360 855680 68722 83779 57515 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1102400000 31135 1426 29255 58503;58504;58505 47238;47239 47239 2 9606 Homo sapiens -0.045068750984910366 YLAEFATGNDR Unmodified 1255.5833 0.5833155 3709 V9HW98;P62258;G9K389;G9K388;P62258-2;B7ZA86;K7EM20;B3KT37 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 0 0 5 0.816 1 1 1 53.054 53.11 2 0.0012022 15243 20230619_1886_Aki_TMTPro18x_K_F6 99.257 71.088 35890 26179 35954 36750 29399 34906 36909 35856 37026 46295 53301 52182 50742 44012 49935 54179 47405 59733 33164 24062 36427 36218 31268 35447 36809 36856 38381 46383 53807 52442 51820 46209 50682 54578 45467 56631 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 827980000 31136 3709 29256 58506;58507;58508 47240 47240 1 9606 Homo sapiens -0.034252827129193975 YLAEFATGNDRK Unmodified 1383.6783 0.67827852 3709 V9HW98;P62258;G9K389;G9K388;P62258-2;B7ZA86;K7EM20;B3KT37 HEL2;YWHAE;YWHAE/FAM22B fusion;YWHAE/FAM22A fusion 14-3-3 protein epsilon yes no 0 0 1 7.5 0.5 1 1 49.234 49.307 3 3.2591E-13 13191 20230619_1888_Aki_TMTPro18x_K_F8 204.32 175.36 894480 761800 792420 818470 823360 810480 874890 786000 821500 1025700 1071300 1004900 1112000 958860 1106900 1179600 1017100 1020300 826530 697930 813920 822220 853340 820320 877740 811440 850850 1022800 1089000 1020000 1133200 1002000 1121200 1172800 974000 970730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5048400000 31137 3709 29257 58509;58510 47241;47242 47242 2 9606 Homo sapiens 0.0017865075824374799 YLAEVAAGDDK Unmodified 1150.5506 0.55061839 2805 D0PNI1;P63104;E7EX29;B0AZS6;P63104-2;B7Z2E6;H0YB80 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 0 3 1.41 1 1 1 1 1 52.46 52.498 3 0.0026341 15572 20230619_1881_Aki_TMTPro18x_K_F2 74.944 56.164 444910 362770 450290 415170 434160 488680 461680 467580 559180 544780 495330 519770 550350 482760 525080 585060 560390 589410 411430 332590 456510 416160 453170 488160 467040 481090 561850 545770 513850 527470 558920 504610 536670 586370 536040 559670 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1253200000 31138 2805 29258 58511;58512;58513;58514;58515 47243;47244;47245 47244 3 9606 Homo sapiens -0.0186348983577318 YLAEVAAGDDKK Unmodified 1278.6456 0.6455814 2805 D0PNI1;P63104;E7EX29;B0AZS6;P63104-2;B7Z2E6;H0YB80 YWHAZ 14-3-3 protein zeta/delta yes no 0 0 1 4.71 1.03 1 2 2 2 49.1 49.166 3;4 7.3816E-07 13634 20230619_1886_Aki_TMTPro18x_K_F6 146.36 120.23 2727400 2136600 2482500 2436300 2167400 2386000 2343000 2295800 2448800 3130000 3531600 3346000 3535500 2999200 3074300 3716000 3654700 3414600 2519400 1959100 2536700 2436200 2281400 2415500 2357700 2374500 2534100 3124000 3570900 3376600 3586100 3142500 3169700 3704200 3489500 3247200 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 18962000000 31139 2805 29259 58516;58517;58518;58519;58520;58521;58522 47246;47247;47248 47248 3 9606 Homo sapiens 0.017404436353899655 YLAEVACGDDR Unmodified 1267.5503 0.55030081 3511 P27348;B4DMT8;Q53S41;B4DY04;E9PG15 YWHAQ 14-3-3 protein theta yes no 0 0 0 2 0.816 1 1 1 48.251 48.301 2 0.00027975 13379 20230619_1882_Aki_TMTPro18x_K_F3 148.73 99.904 593220 560980 616230 580080 634670 640680 716190 571920 610560 735090 759920 643240 779180 616130 1019000 755620 710240 772290 549240 513590 624110 585440 658970 642210 714070 593760 634530 731250 773450 656660 805240 644230 1013500 758880 682960 733120 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1387000000 31140 3511 29260 58523;58524;58525 47249;47250 47250 2 9606 Homo sapiens -0.07277232827277658 YLAEVACGDDRK Unmodified 1395.6453 0.64526383 3511 P27348;B4DMT8;Q53S41;B4DY04;E9PG15 YWHAQ 14-3-3 protein theta yes no 0 0 1 5.25 1.56 1 2 2 1 1 1 45.863 45.926 2;3 2.0709E-10 12090 20230619_1886_Aki_TMTPro18x_K_F6 171.26 128.57 2733600 1926000 2138400 2394500 2169300 2347000 2348700 2277800 2431300 3389800 3434400 3294000 3558000 3042300 2659000 4261900 3900500 3584100 2520900 1768300 2223500 2379000 2256600 2375900 2361500 2361900 2516400 3361700 3479800 3341700 3585600 3210000 2797000 4220400 3717800 3412600 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 11059000000 31141 3511 29261 58526;58527;58528;58529;58530;58531;58532;58533 47251;47252;47253;47254;47255;47256 47254 6 9606 Homo sapiens -0.03673299356114512 YLAEVASGEK Unmodified 1065.5342 0.53424004 145 A0A024R1K7;Q04917;B2R6N6;Q9H4N8;A2IDB2 YWHAH 14-3-3 protein eta yes no 0 0 0 4 0 1 51.677 51.705 3 0.0082916 14772 20230619_1883_Aki_TMTPro18x_K_F4 69.672 47.142 220590 158700 195700 252190 178410 195490 230190 222360 238940 350460 386690 390220 422740 345770 300670 447630 424810 452390 203630 146100 200960 246090 188080 202530 229490 228860 249190 348290 391230 392930 424450 363580 315570 447990 405440 429530 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 314670000 31142 145 29262 58534 47257 47257 1 9606 Homo sapiens 0.004094289981367183 YLAEVASGEKK Unmodified 1193.6292 0.62920306 145 A0A024R1K7;Q04917;B2R6N6;Q9H4N8;A2IDB2 YWHAH 14-3-3 protein eta yes no 0 0 1 7.5 0.5 1 1 48.372 48.448 3 0.0048223 12862 20230619_1888_Aki_TMTPro18x_K_F8 71.806 51.018 229160 208310 215590 205800 218320 200900 242770 237580 214860 271770 270560 229610 253220 180760 251350 241430 212710 169170 211940 190660 220070 208220 226800 204610 242600 241060 222940 271320 273990 233430 258550 191350 253420 237690 203590 161600 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 213760000 31143 145 29263 58535;58536 47258 47258 1 9606 Homo sapiens 0.04013362469322601 YLAEVATGEK Unmodified 1079.5499 0.5498901 3701 P61981;B3KNB4;B4DHC4 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes no 0 0 0 4 1.22 1 2 2 2 1 52.305 52.36 2;3 1.1445E-06 14705 20230619_1885_Aki_TMTPro18x_K_F5 200.05 148.7 510630 422470 472620 490290 422070 508990 511970 531350 542690 589280 674220 656790 670400 560050 574520 757510 704330 663820 471910 387350 482670 489990 445210 513770 512250 542820 556420 594300 685190 660840 679770 591160 594070 752280 672360 631640 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3826499999.9999995 31144 3701 29264 58537;58538;58539;58540;58541;58542;58543;58544 47259;47260;47261 47260 3 9606 Homo sapiens 0.013297155151803963 YLAEVATGEKR Unmodified 1235.651 0.65100113 3701 P61981;B3KNB4;B4DHC4 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes no 0 0 1 7 0 1 46.044 46.132 3 0.02368 11810 20230619_1887_Aki_TMTPro18x_K_F7 60.539 41.441 156180 186560 211630 163400 189870 171020 204490 172450 176730 187490 176830 132800 168590 113350 282520 133190 133030 119510 145260 170460 209700 167320 198750 172680 204540 176540 181740 186970 181060 136680 177350 118790 276200 133260 128640 113710 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128990000 31145 3701 29265 58545 47262 47262 1 9606 Homo sapiens 0.042601672178761874 YLAFTEEK Unmodified 999.49131 0.49131259 1061 A0A0S2Q0B1;O14497;O14497-2;H0Y488;A0A1B0GTU5;O14497-3;Q96TA9;Q4LE49 ARID1A;ARID1A variant protein AT-rich interactive domain-containing protein 1A yes no 0 0 0 5 0 1 54.516 54.583 2 7.134E-09 15654 20230619_1885_Aki_TMTPro18x_K_F5 162.5 103.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31146 1061 29266 58546 47263 47263 1 9606 Homo sapiens -0.008453410592892396 YLAIAPPIIK Unmodified 1097.6849 0.68486744 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;F5GWI0 DDB1 DNA damage-binding protein 1 yes no 0 0 0 4 0 1 62.197 62.202 3 0.00033323 19250 20230619_1883_Aki_TMTPro18x_K_F4 93.551 60.326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31147 1710 29267 58547 47264 47264 1 9606 Homo sapiens 0.1399324044759851 YLANIEQQHGNSGR Unmodified 1585.7597 0.75971673 312 A0A024R4X7;Q9UKX7-2;Q9UKX7 hCG_1989366;NUP50 Nuclear pore complex protein Nup50 yes no 0 0 0 6.5 0.5 1 1 39.48 39.557 3 1.0374E-57 9332 20230619_1886_Aki_TMTPro18x_K_F6 267.93 242.59 65620 58044 61292 64247 73099 77536 69388 68803 72861 77730 75957 68557 74717 67983 60898 76717 85654 72612 60675 53184 62811 64562 74875 77225 70298 71119 74208 77803 77668 70015 75693 70593 63616 76685 81624 69058 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 199070000 31148 312 29268 58548;58549 47265;47266 47265 2 9606 Homo sapiens -0.009732735497891554 YLAPSGPSGTLK Unmodified 1189.6343 0.63428844 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 0 2.2 0.748 1 2 2 49.655 49.709 2;3 1.5096000000000001E-24 14279 20230619_1881_Aki_TMTPro18x_K_F2 214.04 186.4 778870 679900 712840 757240 682950 813930 846990 803830 823860 926830 1008600 935970 1080300 854320 888090 1033400 997420 959330 719990 623040 729580 759390 716520 818590 843940 825300 848350 930150 1028600 947430 1090600 893620 913270 1031100 953000 912100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 5962599999.999999 31149 1426 29269 58550;58551;58552;58553;58554 47267;47268;47269;47270 47268 4 9606 Homo sapiens 0.04705666331960856 YLASGSFDK Unmodified 986.47091 0.4709115 4477;696 Q9BZK7;C9JLJ1;B7Z475;A0A0D9SF63;Q9BQ87;A0A024R189;B4DP68;A0A494C153;A0A804HJZ5;A0A2R8YFW3;Q59F53;A0A024RBV9;O60907-2;O60907 TBL1XR1;TBL1Y;TBL1X F-box-like/WD repeat-containing protein TBL1XR1;F-box-like/WD repeat-containing protein TBL1Y;F-box-like/WD repeat-containing protein TBL1X no no 0 0 0 7 0.816 1 1 1 50.357 50.435 2 0.00022809 13709 20230619_1888_Aki_TMTPro18x_K_F8 143.28 104.26 427090 328340 392380 420960 417220 452180 430130 411850 459720 556730 575100 566990 608760 476000 476970 653440 637650 639190 394510 301430 402000 417880 431760 454000 434000 427480 471760 555020 585890 572190 613780 503580 497180 652430 608550 607250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 309140000 31150 4477;696 29270 58555;58556;58557 47271;47272 47272 2 9606 Homo sapiens -0.02286511719103146 YLASGSGDTTVR Unmodified 1225.5939 0.59388018 2638 B4E303;B4E074;Q9NVX2 NLE1 Notchless protein homolog 1 yes no 0 0 0 5 0.816 1 1 1 39.735 39.809 2 9.9777E-52 9414 20230619_1885_Aki_TMTPro18x_K_F5 337.59 283.39 113320 100350 95475 106010 121370 116530 109830 138350 153230 140990 161580 143890 168170 121880 141030 159260 193340 158530 104700 91908 98893 106810 123690 117630 112820 139790 153950 142410 165510 145310 170040 128530 146850 159340 184240 150710 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 157950000 31151 2638 29271 58558;58559;58560 47273;47274 47274 2 9606 Homo sapiens -0.009893000585179834 YLATCADDR Unmodified 1083.4655 0.46550855 1126 E9PF19;B4DY50;Q96E41;A0A0S2Z5F3;Q8N2L6;B2RB52;A0A384MDS4;Q9Y4P3;F8WDI9;A0A0S2Z5C1;A0A087WXC6 TBL2 Transducin beta-like protein 2 yes no 0 0 0 2.5 0.5 1 1 39.595 39.657 2 5.6225E-06 9636 20230619_1881_Aki_TMTPro18x_K_F2 182.73 138.92 94712 71868 92617 98555 99195 104920 102340 112800 125090 108140 124170 132330 119030 111490 109400 115350 159900 138510 87522 66030 94386 97416 102600 105780 103750 114550 126050 110280 127260 132510 121320 115870 114220 117140 152350 131390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75150000 31152 1126 29272 58561;58562 47275;47276 47275 2 9606 Homo sapiens -0.07288558573236514 YLAVESPFLK Unmodified 1165.6383 0.63831118 337 A0A024R5F4;P50416;B2RAQ8;P50416-2 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform yes no 0 0 0 1.5 0.5 1 1 62.068 62.072 3 0.00032578 19528 20230619_1881_Aki_TMTPro18x_K_F2 111.61 103.7 104880 93191 103810 116060 141460 165010 171000 166290 180090 127700 113060 127310 141580 105380 115360 150060 130680 157810 97021 85483 106250 115970 144780 163110 170840 168700 180180 131180 120510 128550 142290 111880 118810 150390 125070 149710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 118930000 31153 337 29273 58563;58564 47277;47278 47278 2 9606 Homo sapiens 0.06211755825665932 YLCDEQK Unmodified 954.41168 0.41168206 1676;2901 Q04637;Q04637-3;A0A7I2Y1C3;Q04637-4;Q04637-5;B4DGF1;Q4LE58;B2RU10;B2RU06;Q04637-9;B4DSI9;Q04637-6;Q96I65;E7EUU4;Q04637-8;E7EX73;E9PGM1;Q04637-7 EIF4G1;EIF4G1 variant protein Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 3.5 0.5 1 1 42.69 42.745 2 0.0070992 10810 20230619_1882_Aki_TMTPro18x_K_F3 127.84 92.744 138360 74346 159230 184350 196070 216890 167310 215410 192410 173610 240820 250580 233160 205470 211340 131580 271040 234900 127820 69036 160710 177320 199950 216570 171340 218940 196410 180000 244520 249190 237230 209610 218100 139500 258500 222150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 91363000 31154 1676;2901 29274 58565;58566 47279;47280 47280 2 9606 Homo sapiens -0.06734731004928562 YLCECQFDDNLK Unmodified 1603.6647 0.66467864 4397 Q96T23-2;Q96T23;H0YER1;Q05DG0;H7C306 RSF1 Remodeling and spacing factor 1 yes no 0 0 0 4.5 0.5 1 1 55.866 55.903 3 0.00015828 16590 20230619_1883_Aki_TMTPro18x_K_F4 103.43 92.328 159080 145880 171880 164110 160650 195510 180590 190300 224100 195620 181600 171770 207290 168380 164160 243590 206360 231260 147310 133660 173340 164730 168460 195190 182310 194840 224140 196760 189340 175520 208710 177840 170470 242610 197210 219690 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 170700000 31155 4397 29275 58567;58568 47281;47282 47281 2 9606 Homo sapiens -0.1130071112747828 YLDEADRDK Unmodified 1123.5146 0.51456723 2543 B4DMG1;Q9NP66;H0YKM5 HMG20A High mobility group protein 20A yes no 0 0 1 2 0 1 40.622 40.695 3 0.035614 10124 20230619_1881_Aki_TMTPro18x_K_F2 60.167 44.288 180950 121880 151600 158300 166130 178160 169720 182680 217410 184660 242320 249410 238480 208740 186710 200470 258180 246730 166910 111970 156680 157150 171620 178740 172460 186350 219590 188530 247230 248840 241140 216210 194770 204160 246260 233900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50402000 31156 2543 29276 58569 47283 47283 1 9606 Homo sapiens -0.04224947012630764 YLDEDTIYHLQPSGR Unmodified 1805.8584 0.85842773 1192 A0A140VJP5;P31153;B4DEX8;P31153-2 MAT2A S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase yes no 0 0 0 4 0.816 1 1 1 52.029 52.083 3 3.7146E-33 14919 20230619_1883_Aki_TMTPro18x_K_F4 244.67 218.54 756090 694390 787270 786810 757940 799350 855660 826200 657890 901280 906100 578500 610440 433800 903180 475600 475830 399520 699910 636300 796670 787540 791160 808300 851470 844120 692090 896180 903470 597320 644950 455080 887320 474530 458870 380550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1236100000 31157 1192 29277 58570;58571;58572 47284;47285;47286 47285 3 9606 Homo sapiens -0.01226715095367581 YLDIHER Unmodified 944.47158 0.4715802 3702 P62072 TIMM10 Mitochondrial import inner membrane translocase subunit Tim10 yes yes 0 0 0 3.5 0.5 1 1 38.723 38.771 3 0.0021082 9016 20230619_1883_Aki_TMTPro18x_K_F4 125.01 72.708 60131 46236 54099 57052 67366 66402 65758 65968 69899 69119 86233 87517 91667 76793 72851 86145 98372 92756 55535 42431 55666 56856 68828 66448 66538 67508 71621 70240 87934 87671 92495 80064 75887 86753 93836 88051 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 272530000 31158 3702 29278 58573;58574 47287 47287 1 9606 Homo sapiens -0.0028767227937578355 YLDLEEEADTTK Unmodified 1425.6511 0.65112029 404 A8K5J7;A0A024R6M6;Q9UL15;Q9UL15-2 BAG5 BAG family molecular chaperone regulator 5 yes no 0 0 0 1 0 1 55.638 55.638 3 0.040897 16677 20230619_1880_Aki_TMTPro18x_K_F1 47.189 34.422 62108 49427 53517 60960 47941 62167 56363 54306 63393 65292 64251 75376 75344 67440 76892 76664 76750 82199 57354 45352 55047 60620 50566 62574 56573 56344 64249 65711 66467 75760 76640 70303 78153 77208 73473 77994 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40684000 31159 404 29279 58575 47288 47288 1 9606 Homo sapiens -0.044679223634375376 YLDLHDCYLK Unmodified 1338.6278 0.62782285 2066 B3KY12;A8K7V1;A8K566;Q12874;Q53HM6;B4DW90 SF3A3 Splicing factor 3A subunit 3 yes no 0 0 0 6.5 0.5 1 1 53.343 53.415 3 0.0010164 15140 20230619_1887_Aki_TMTPro18x_K_F7 83 58.929 116730 120380 119230 116310 142940 166160 162250 145380 161560 136760 139250 119330 128650 112030 132310 151800 162500 127940 108130 110120 121290 118530 147130 163800 162380 149710 163670 138220 143360 121830 131880 117870 136240 150520 154940 121900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1920599999.9999998 31160 2066 29280 58576;58577 47289 47289 1 9606 Homo sapiens -0.02794594891088309 YLDPEYIDR Unmodified 1182.5557 0.55570376 3320 O75935-3;O75935;X6RA56;X6RCK5;A0A0A0MRV8;Q8NB28;X6RLR1;O75935-2 DCTN3 Dynactin subunit 3 yes no 0 0 0 2.5 0.5 1 1 52.313 52.365 2 0.0029928 15229 20230619_1882_Aki_TMTPro18x_K_F3 101.25 81.089 81183 76900 78798 78093 93805 114010 92364 88999 117740 67132 62835 66883 68519 57821 80127 74177 69835 65424 75124 70393 80481 79266 96339 111990 93946 92056 116200 69135 67367 67623 70319 60796 80671 73816 66887 62249 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 116470000 31161 3320 29281 58578;58579 47290 47290 1 9606 Homo sapiens -0.0282718597316034 YLDPSFFQHR Unmodified 1308.6251 0.62512073 10 Q96JZ5;A0A024QYS2;Q9HD45;Q8WUB5;Q5TB53;Q8NCC4 SMBP;TM9SF3 Transmembrane 9 superfamily member 3 yes no 0 0 0 1.5 0.5 1 1 53.578 53.593 3 2.9391E-07 15994 20230619_1881_Aki_TMTPro18x_K_F2 179.1 159.79 147360 121830 138360 140740 114500 140280 147430 152670 149940 165450 157430 169340 180900 141390 155090 186230 175920 183240 136200 111700 140980 140640 121810 142170 146890 155450 153020 166560 162280 170770 182580 149190 159490 186160 168170 174050 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 189090000 31162 10 29282 58580;58581 47291;47292 47292 2 9606 Homo sapiens -0.01684682233735657 YLEANMTQSALPK Oxidation (M) 1480.7232 0.7231798 3129 J3KQ32;Q9NTK5;Q53SQ6;Q9NTK5-2 OLA1;PTD004 Obg-like ATPase 1 yes no 0 1 0 7 0 1 49.696 49.781 3 0.00085641 13450 20230619_1887_Aki_TMTPro18x_K_F7 83.877 63.771 162370 130400 143780 162730 149820 173560 168070 156670 179030 196450 199150 212610 221770 195030 195710 211090 226830 227610 149980 119660 147820 161790 155730 174290 168750 162350 182690 196900 204470 214440 224440 202600 201260 212760 216740 216010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 356350000 31163 3129 29283 58582 47293 47293 1818 1 9606 Homo sapiens 0.0020471350928801257 YLEATGQLPVKK Unmodified 1345.7606 0.76055158 2867;2868 E5KND5;Q96RP9;Q96RP9-2;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 1 2 0 1 50.696 50.747 4 0.0031834 14808 20230619_1881_Aki_TMTPro18x_K_F2 56.205 39.981 56843 48080 56798 54744 56651 75266 61806 63708 71309 69419 71202 66876 69480 64521 71997 66561 63032 64234 52572 44073 57703 55020 59104 74260 62331 66009 72108 69794 72968 67929 71105 66716 72644 66758 60404 61030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27527000 31164 2867;2868 29284 58583 47294 47294 1 9606 Homo sapiens 0.1015017283718862 YLECSALTQR Unmodified 1239.5918 0.59177169 1881;3680 A4D2P1;A4D2P0;A0A994J6T1;P63000;P63000-2;A4D2P2;A0A024R1P2;P15153;B1AH77;B1AH78;B1AH80;P60763;J3KSC4;J3QLK0 RAC1;RAC2;RAC3 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2;Ras-related C3 botulinum toxin substrate 3 no no 0 0 0 7 0.816 2 2 2 46.871 46.944 2;3 7.8731E-08 12550 20230619_1886_Aki_TMTPro18x_K_F6 159.34 134.54 556970 463660 534640 512430 477200 541380 536750 545370 570170 600100 567820 529630 686100 524210 573730 684840 639650 588160 514900 424920 543950 514190 501960 545480 539050 558270 579300 601360 587600 541030 690770 549630 589600 679910 611020 559850 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2515300000 31165 1881;3680 29285 58584;58585;58586;58587;58588;58589 47295;47296;47297 47295 3 9606 Homo sapiens -0.018440520679632755 YLEDGGLER Unmodified 1050.4982 0.49818889 3394 P07099;R4SBI6;Q6FGZ3 EPHX1 Epoxide hydrolase 1 yes no 0 0 0 1 0 1 45.177 45.177 2 0.0033396 12371 20230619_1880_Aki_TMTPro18x_K_F1 98.009 31.505 188750 149060 189480 182860 232150 307030 252800 252360 341980 192210 199840 204040 205990 189970 213820 200610 213110 205980 174500 136770 193130 183500 238850 299600 256270 259860 337190 198210 212060 206170 210580 196920 217170 201800 203860 195610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 100060000 31166 3394 29286 58590 47298;47299 47299 2 9606 Homo sapiens -0.025040281787141794 YLEEIATQMR Unmodified 1252.6122 0.61217279 1831 A0A8V8TMY4;Q01813;A0A7I2V3Z0;Q01813-2;B1APP6;Q8WTZ9;O14943;H0Y3Y3 PFKP;PFK-P ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 5.5 0.5 2 2 59.557 59.615 2;3 2.76E-07 17976 20230619_1886_Aki_TMTPro18x_K_F6 151.83 134.31 69919 55680 57336 61340 48711 63578 68478 65067 76388 73796 69053 78958 86048 70114 79042 88482 73199 93737 64545 51035 59203 61538 51921 64149 68135 66617 77096 74274 72019 79608 86920 73611 80236 88884 70235 88900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 138090000 31167 1831 29287 58591;58592;58593;58594 47300;47301 47301 2 9606 Homo sapiens -0.004028814081266319 YLEEVMK Unmodified 910.447 0.44700494 1553 O95394-4;J3KN95;H0Y987;A0A8V8TMH7;B3KN28;A0A8V8TLT8;A0A494C1Q4;A0A8V8TNH4;A0A494C1E2;A0A8V8TMI1;O95394;O95394-3;A0A087WT27;A0A494C0G1 PGM3 Phosphoacetylglucosamine mutase yes no 0 0 0 5 0 1 55.184 55.251 2 0.08194 15938 20230619_1885_Aki_TMTPro18x_K_F5 68.915 18.875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31168 1553 29288 58595 47302 47302 1 9606 Homo sapiens -0.01180068477117402 YLELFQR Unmodified 967.51272 0.51271674 2559 C9JEG3;B4DNZ2;Q8N8F1;Q8IYF4;Q49A43;Q05DH5;Q9UBQ6;O00245 EXTL2 Exostosin-like 2;Processed exostosin-like 2 yes no 0 0 0 1.5 0.5 1 1 58.698 58.698 2 0.064998 17974 20230619_1880_Aki_TMTPro18x_K_F1 85.359 66.577 56553 49194 52028 58112 56994 77022 71435 68346 80334 60529 63687 79997 65643 65482 95093 73254 81572 105120 52279 45105 53371 58196 59318 76210 71429 70220 80604 62223 66400 79796 68402 68433 95319 75329 78341 99419 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82868000 31169 2559 29289 58596;58597 47303;47304 47303 2 9606 Homo sapiens 0.027660887600859496 YLENQTFR Unmodified 1069.5193 0.51925868 1621 B0AZS5;A0A6Q8PFA6;A0A6Q8PH57;O00139-2;A0A6Q8PGH7;A0A6Q8PG37;B4DM85;O00139-1;O00139-5;O00139;O00139-4;A0A6Q8PGG1;D6R9M0 KIF2A Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 5.5 0.5 1 1 44.826 44.909 2 0.00095287 11651 20230619_1886_Aki_TMTPro18x_K_F6 163.99 132.7 215930 171670 200140 201070 176830 227190 214390 184230 239200 263040 243150 238870 290510 226460 226080 298410 283570 251050 199510 157440 204320 201000 186830 226740 214750 193370 242640 260920 251280 243220 291840 237870 234580 295870 270540 239070 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 203180000 31170 1621 29290 58598;58599 47305 47305 1 9606 Homo sapiens -0.012720180792030078 YLENYDAIR Unmodified 1155.556 0.55603811 1214 A0A140VJZ4;P15374;A0A087WTB8;Q5TBK7 UCHL3 Ubiquitin carboxyl-terminal hydrolase isozyme L3;Ubiquitin carboxyl-terminal hydrolase yes no 0 0 0 3.5 0.5 1 1 49.849 49.904 2 1.2408E-06 13927 20230619_1883_Aki_TMTPro18x_K_F4 191.85 139.13 279030 245080 258420 285130 237840 259870 278460 284990 297310 325670 308520 301280 349220 281700 304590 377840 363610 336610 257970 224670 264070 284410 249780 265360 279100 290520 302490 326130 317750 306430 352960 296360 314160 375630 347150 320250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 222530000 31171 1214 29291 58600;58601 47306;47307 47307 2 9606 Homo sapiens -0.015517662533056864 YLESAGAR Unmodified 865.42938 0.42938104 1681 A0A7I2YQQ3;A8K335;Q92820;A0A7I2V5X9;B4DVI2;A0A7I2V5P2 GGH Gamma-glutamyl hydrolase yes no 0 0 0 4.5 0.5 1 1 37.545 37.614 2 0.0019272 8596 20230619_1883_Aki_TMTPro18x_K_F4 134.85 50.788 147310 84847 146760 176660 180110 166670 165200 178470 201970 149320 188590 189220 179370 162850 162210 120380 201900 186900 135960 78505 149770 170540 183840 169480 168610 180770 202940 153750 193700 189300 182640 166640 167190 125540 192680 176870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194890000 31172 1681 29292 58602;58603 47308 47308 1 9606 Homo sapiens -0.008716476877566492 YLESEEYQER Unmodified 1344.5834 0.58337508 1298 B0S7P4;A0A1U9X819;Q9Y676;B4DFG6;A0A0G2JIC6 MRPS18B 28S ribosomal protein S18b, mitochondrial yes no 0 0 0 1 0 1 42.922 42.922 2 0.00065587 11392 20230619_1880_Aki_TMTPro18x_K_F1 138.08 121.86 83589 62235 89349 97987 125830 133200 111260 108150 128600 107890 127460 126810 143790 104560 113370 138460 137530 136520 77293 57279 90885 96398 127370 131400 113540 112210 129950 109690 131510 127200 144680 110450 117290 138410 131350 129690 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 122640000 31173 1298 29293 58604 47309 47309 1 9606 Homo sapiens -0.07513327503579603 YLETLLYSQQQLAK Unmodified 1696.9036 0.903587 3862 Q59GU6;Q53HL9;Q53GY8;Q13596;Q13596-2;H0YK42 SNX1 Sorting nexin-1 yes no 0 0 0 3 0 1 63.212 63.242 3 4.9878E-05 19770 20230619_1882_Aki_TMTPro18x_K_F3 99.844 66.787 54284 44116 53336 63838 49213 73755 51958 56602 73550 65475 59633 71090 75237 67207 70890 81219 79437 83050 50185 40547 54278 62926 51717 73364 52915 59249 73167 65912 62606 71763 76128 70182 72690 81465 75947 78848 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 191590000 31174 3862 29294 58605 47310 47310 1 9606 Homo sapiens 0.0830113543781863 YLETPGDENEHAHFQK Unmodified 1913.8544 0.85440498 1165 A0A218KGR2;P05067;P05067-8;P05067-11;E9PG40;A0A140VJC8;P05067-4;A0A0A0MRG2;P05067-9;P05067-7;P05067-6;P05067-10;B4DJT9;B4DQM1;H7C0V9;B4DM00;P05067-3;P05067-5;B4DMD5;H7C2L2 APP Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes no 0 0 0 3 0.816 1 1 1 42.256 42.318 4 1.378E-05 10548 20230619_1883_Aki_TMTPro18x_K_F4 104.41 92.772 73813 73179 67522 77586 83430 85946 85339 81761 94571 69261 73138 70577 77397 62667 76606 78248 84742 71229 68295 67001 69413 78122 85419 86224 86190 83500 94903 70756 76236 71364 78818 65731 78363 77992 80909 67777 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 270650000 31175 1165 29295 58606;58607;58608 47311 47311 1 9606 Homo sapiens -0.06596804589071326 YLFLGDYVDR Unmodified 1259.6186 0.61863837 1092 A0A0S2Z4B5;Q08209;A0A0S2Z4C6;Q08209-2;Q08209-3;E7ETC2;Q08209-5;Q5F2F8;P16298-4;P16298-2;P16298-3;P16298;B7Z781;P48454-3;P48454;E9PK68;P48454-2;E9PPC8;G3V111;H0YB02 PPP3CA;PPP3CB;PPP3CC Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform yes no 0 0 0 7 0 1 62.396 62.432 2 0.00026447 18906 20230619_1887_Aki_TMTPro18x_K_F7 158.37 138.2 204810 134810 191630 195820 156550 172820 198380 182490 209830 205250 197110 223880 241790 208030 164670 284880 251630 279530 189050 124020 195250 192420 166520 176690 197990 186500 212680 206790 204900 225960 241810 219150 174280 284350 240110 265450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 321500000 31176 1092 29296 58609 47312 47312 1 9606 Homo sapiens -0.0007862018510422786 YLFPVPK Unmodified 862.49528 0.49527576 3027 H0Y714;Q96G21;E7ENR5;B8ZZ47;B9A008 IMP4 U3 small nucleolar ribonucleoprotein protein IMP4 yes no 0 0 0 4 0 1 59.543 59.545 2 0.018756 18100 20230619_1883_Aki_TMTPro18x_K_F4 106.84 76.119 130190 85668 106240 113680 103690 144240 122220 117330 131360 132460 121370 105640 148230 105190 123490 141510 134320 132950 120060 78730 109960 112860 108700 142820 122440 122110 132980 132280 126070 108530 149120 110570 126700 141080 128400 126370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109720000 31177 3027 29297 58610 47313 47313 1 9606 Homo sapiens 0.05852793225096775 YLFTGLK Unmodified 840.47454 0.47454032 1976 A6NJA2;B2RD79;P54578-2;P54578-3;P54578;D3DUG9;B3KTG4 USP14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 4.5 0.5 1 1 59.623 59.652 2 0.012872 17765 20230619_1885_Aki_TMTPro18x_K_F5 114.72 51.068 176760 148480 171670 166440 135520 182270 175910 174850 205520 134540 115190 93766 112640 93240 173020 133370 123820 103240 163430 136090 174280 166900 145010 182890 175930 178060 203880 137040 122330 97164 117900 98327 171940 131830 118810 98454 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130860000 31178 1976 29298 58611;58612 47314 47314 1 9606 Homo sapiens 0.04792202845430893 YLGAMQVADK Unmodified 1094.543 0.54303059 814 A0A087WUB9;Q8WYA6;Q8WYA6-3;Q8WYA6-2;Q8WYA6-4 CTNNBL1 Beta-catenin-like protein 1 yes no 0 0 0 8 0 1 52.864 52.939 2 0.034299 14816 20230619_1888_Aki_TMTPro18x_K_F8 67.207 36.549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31179 814 29299 58613 47315 47315 1 9606 Homo sapiens -0.00045920637035123946 YLGEGPR Unmodified 790.39735 0.39735263 2016 A8K2M0;P43686;P43686-2 PSMC4 26S protease regulatory subunit 6B yes no 0 0 0 4 0.816 1 1 1 38.113 38.176 2 0.050738 8795 20230619_1885_Aki_TMTPro18x_K_F5 85.89 46.347 56711 54520 56333 63100 68879 79484 66008 68089 74905 75392 83676 83322 85506 76725 72469 70609 93809 90935 52493 49962 57491 63228 70510 78870 67012 70531 76172 76056 85504 83976 86629 79052 75082 72208 89529 86165 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 348170000 31180 2016 29300 58614;58615;58616 47316 47316 1 9606 Homo sapiens -0.006230153709111619 YLGFGTPSNLGK Unmodified 1252.6452 0.64518747 364 Q9H072;A0A024R5X7;O76031 DKFZp586J151;CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial yes no 0 0 0 3.5 0.5 1 1 57.759 57.777 3 5.1554E-05 17380 20230619_1883_Aki_TMTPro18x_K_F4 117.52 91.402 134720 108290 118520 144690 110400 138610 139730 135070 138310 146730 132850 139010 158490 121650 134030 165300 159300 159600 124430 99446 121810 143000 116240 140480 139150 138590 140870 147400 137730 140900 159720 128440 138290 164990 152180 151650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27688000 31181 364 29301 58617;58618 47317 47317 1 9606 Homo sapiens 0.028970687062155775 YLGGSGGAGGR Unmodified 950.45699 0.45699277 4133 Q6SPF0;E9PIW9 SAMD1 Atherin yes no 0 0 0 7.5 0.5 1 1 34.915 34.949 2 6.6423E-05 7470 20230619_1888_Aki_TMTPro18x_K_F8 140.83 100.73 52632 30529 57323 63440 68598 77739 60551 73686 74485 59507 81638 88714 79427 69287 71224 43102 94613 75430 48615 28245 58044 61483 70170 77356 62001 75150 75309 61796 83364 87995 80768 70747 73687 45654 90166 71372 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 33753000 31182 4133 29302 58619;58620 47318;47319 47319 2 9606 Homo sapiens -0.0202174442750902 YLGINSDGLVVGR Unmodified 1361.7303 0.73031409 3888 Q14331;E9PRR7 FRG1 Protein FRG1 yes no 0 0 0 1 0 1 57.437 57.437 2 9.8434E-16 17467 20230619_1880_Aki_TMTPro18x_K_F1 252.14 209.67 68506 64844 62775 75519 60354 74864 75441 69764 84843 77485 75900 72013 82720 61775 77249 95358 73324 83340 63363 59429 64302 75375 63369 75631 75464 71863 85535 77747 78575 73067 83887 65865 78539 94552 70263 79247 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 120640000 31183 3888 29303 58621 47320 47320 1 9606 Homo sapiens 0.06391814172002341 YLGIPGDK Unmodified 861.45962 0.45961853 682 Q16881;Q16881-3;B2R5P6;Q16881-6;Q16881-5;B7Z2S5;Q16881-2;E9PIR7;Q16881-4;A0A182DWI3;A0A024RBK9;A0A140VKC9;Q6ZR44;Q16881-7;E9PKD3 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 0 0 0 7.5 0.5 2 2 51.834 51.909 2;3 0.0084127 14422 20230619_1887_Aki_TMTPro18x_K_F7 104.75 29.534 323090 244530 277840 284150 344330 390730 330670 337140 405300 384200 401690 402040 455250 336490 355240 449990 438220 452700 298260 224290 287050 285130 352350 385790 336510 349260 408620 386380 414530 405230 457900 355500 368090 450210 418580 429900 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 788650000 31184 682 29304 58622;58623;58624;58625 47321;47322 47321 2 9606 Homo sapiens 0.023347109774249475 YLGLLENVR Unmodified 1075.6026 0.60259438 2174 E9PDF6;B0I1S9;O43795-2;O43795 MYO1B Unconventional myosin-Ib no no 0 0 0 1 0 1 60.241 60.241 2 0.00077421 18577 20230619_1880_Aki_TMTPro18x_K_F1 138.54 78.037 175260 144500 154470 195030 180680 207890 199310 204680 219630 112490 118030 91623 96087 85582 152830 131400 115040 80561 161910 132690 159310 192890 186210 209080 200420 206870 218180 118170 124880 94011 101510 90816 152200 128550 110190 77183 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45485000 31185 2174 29305 58626 47323 47323 1 9606 Homo sapiens 0.06781718368665679 YLGQDYEQLR Unmodified 1283.6146 0.61461563 326 A0A024R5A3;A0A024R580;B2RDI5;P07384;E9PLX0;E9PJJ3;E9PLC9;E9PMC6;E9PJA6;E9PSA6;E9PQB3;E9PRM1;E9PIA9 CAPN1 Calpain-1 catalytic subunit yes no 0 0 0 4 0 1 49.375 49.41 2 1.8276E-07 13701 20230619_1883_Aki_TMTPro18x_K_F4 191.67 142.57 107740 103210 108600 119580 116800 135750 132800 135950 153580 142040 164630 168270 168260 143080 160090 169960 190750 197360 99733 94582 110460 119650 121160 136040 133630 139030 155670 144030 168580 168820 171250 149870 164680 171860 182250 187140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146770000 31186 326 29306 58627 47324 47324 1 9606 Homo sapiens -0.015847096788320414 YLHDESGLNR Unmodified 1202.568 0.56799978 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;C9J2Q4;C9J938;C9JB25;C9IY94;H7C310 SEPT2 Septin-2 yes no 0 0 0 2.5 0.5 1 1 35.986 36.042 3 5.4445E-14 7972 20230619_1882_Aki_TMTPro18x_K_F3 204.48 177.52 260570 126590 230830 240890 255070 196130 267150 281690 215580 309760 333840 329700 323140 282330 277340 327850 355410 332760 240100 117070 237270 233240 262560 203740 267270 282590 227630 311790 336460 332210 328020 295170 287410 328870 339140 316090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 565700000 31187 3910 29307 58628;58629 47325;47326 47326 2 9606 Homo sapiens -0.025181495100923712 YLHDESGLNRR Unmodified 1358.6691 0.66911081 3910 Q15019-2;Q15019;Q15019-3;A0A384N6H6;B5MCX3;C9J2Q4;C9J938;C9JB25;C9IY94;H7C310 SEPT2 Septin-2 yes no 0 0 1 5 0.816 1 1 1 32.024 32.082 4 3.7644E-12 6523 20230619_1886_Aki_TMTPro18x_K_F6 160.53 102.67 112350 142130 131770 115290 185190 248500 157820 157590 255100 141940 165820 188410 170290 144350 188230 140430 211440 176390 104390 129780 133010 120470 187890 239070 163610 166760 250460 146020 174710 187550 174580 150160 192070 143370 201840 167280 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 329190000 31188 3910 29308 58630;58631;58632 47327;47328 47328 2 9606 Homo sapiens 0.004123021926034198 YLHENLPIPQR Unmodified 1378.7357 0.73573382 3654 P54886-2;P54886 ALDH18A1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes no 0 0 0 4.5 3.5 1 1 45.827 45.846 3 3.8633E-09 11749 20230619_1888_Aki_TMTPro18x_K_F8 152.7 116.96 65557 47957 60777 64886 60542 66820 70363 65289 78482 65194 69486 68346 78016 60947 69290 72647 68103 73520 60542 44061 62161 64153 63181 67376 70616 66829 79099 66016 72085 69010 78896 63758 70566 72859 65210 69800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 423960000 31189 3654 29309 58633;58634 47329;47330 47330 2 9606 Homo sapiens 0.06151537754521996 YLHPPPHLK Unmodified 1100.6131 0.61309948 924 Q9NR56;Q9NR56-5;Q9NR56-2;C9JP00;Q9NR56-6;Q9NR56-7;H7C4T5;A0A0A0MQX8;Q9NR56-3;Q9NR56-4;Q86VM6;B1AKI6;A0A8V8TM16;B1AKI2;C9J4T8;A0A8V8TNS0;Q9NUK0-3;Q9NUK0-4;Q9NUK0-2;Q9NUK0 MBNL1;MBNL3 Muscleblind-like protein 1;Muscleblind-like protein 3 yes no 0 0 0 3 0 1 39.628 39.683 4 0.00032349 9460 20230619_1882_Aki_TMTPro18x_K_F3 124.08 88.855 41524 31316 46914 58338 58562 76668 75948 78895 91735 84136 77638 81935 104200 76122 70976 111000 88901 95883 38419 28888 47494 56875 60462 76096 76013 80541 92016 84698 81477 83131 103860 80597 73971 110010 84935 91204 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69330000 31190 924 29310 58635 47331 47331 1 9606 Homo sapiens 0.06681745813739326 YLIANATNPESK Unmodified 1319.6721 0.67213051 3511 P27348;B4DMT8;Q53S41;E9PG15 YWHAQ 14-3-3 protein theta yes no 0 0 0 7.2 0.748 1 2 2 50.643 50.721 2;3 1.7847E-17 13797 20230619_1888_Aki_TMTPro18x_K_F8 271.62 223.2 343270 279400 280050 292720 284340 292760 319060 307750 325190 427580 391170 399500 483710 384140 288220 518990 487700 489800 316920 255960 289850 294720 295880 296620 319970 316570 334190 424670 402100 406420 481440 404020 308800 517000 464710 465520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 12208000000 31191 3511 29311 58636;58637;58638;58639;58640 47332;47333 47333 2 9606 Homo sapiens 0.025081325267592547 YLIATSEQPIAALHR Unmodified 1681.9152 0.91515474 3609 Q53HA4;Q5T5C7;P49591;Q0VGA5 SARS Serine--tRNA ligase, cytoplasmic yes no 0 0 0 1.5 0.5 1 1 53.253 53.27 3 4.1702999999999995E-52 15677 20230619_1880_Aki_TMTPro18x_K_F1 231.69 204.8 86134 57671 69203 84605 74034 86338 83064 78627 105390 89511 89233 98186 97618 95266 108900 111110 92297 112600 79426 53056 71879 83198 76875 86960 83891 81187 105430 90203 92782 99185 99973 99146 109640 111490 88610 106860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1417900000 31192 3609 29312 58641;58642 47334;47335 47334 2 9606 Homo sapiens 0.1014737725181476 YLIEIAK Unmodified 848.50076 0.50075507 2078 P53990-4;P53990;P53990-2;A8K5S3;P53990-5;H3BMU1;P53990-3;B4DLP1;H3BUI0;B4DM80;J3KR23;B4DXC9;P53990-6 IST1 IST1 homolog yes no 0 0 0 8 0 1 58.078 58.124 2 0.017824 17033 20230619_1888_Aki_TMTPro18x_K_F8 108.09 37.057 172210 147760 161510 173560 153230 191690 178870 177260 182070 221390 221550 231130 242120 200350 221670 274180 252040 270940 159200 135480 164940 173410 160670 192110 179040 183280 187070 221600 226440 233210 245460 211610 227740 273980 240990 257310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 52116000 31193 2078 29313 58643 47336 47336 1 9606 Homo sapiens 0.07044472016900727 YLILGSAVGGGYTAK Unmodified 1468.7926 0.79257999 2865 O60313-2;E5KLM1;O60313-10;O60313;E5KLL9;C9JMB8;A0A2R8YDM2;E5KLM2;E5KLJ9;O60313-11;O60313-9;E5KLM0;A0A2R8YE78;O60313-13;E5KLK0;A0A2R8YD53;A0A2R8YGE5;A0A2R8YE54;A0A2R8Y5G3;A0A2R8Y5E2 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 4 0 1 61.209 61.212 3 0.050117 18842 20230619_1883_Aki_TMTPro18x_K_F4 43.914 29.247 78722 71279 74183 85664 76621 96324 103350 105520 119700 83225 91627 86984 96092 73365 100030 97730 93175 112010 72806 65356 75880 85479 80220 96765 103120 106560 119750 85464 95523 87747 98065 77483 101260 98613 89346 106170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21644000 31194 2865 29314 58644 47337 47337 1 9606 Homo sapiens 0.07693540520381248 YLIPELCK Unmodified 1034.5471 0.54705333 4356 Q96GX9 APIP Methylthioribulose-1-phosphate dehydratase yes yes 0 0 0 4.5 3.5 1 1 60.375 60.375 2 0.0020987 17932 20230619_1888_Aki_TMTPro18x_K_F8 109.86 65.415 75263 71141 78513 74809 60448 78542 67236 73920 75059 90069 100780 97364 89094 84629 90870 109700 102760 102340 69686 65141 79193 75347 64492 79041 67735 76260 77084 90350 101660 98124 91447 88983 93137 109370 98205 97279 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119950000 31195 4356 29315 58645;58646 47338;47339 47339 2 9606 Homo sapiens 0.031161688566726298 YLIPNATQPESK Unmodified 1359.7034 0.70343063 3535 V9HWD6;P31946-2;P31946;B5BU24 HEL-S-1;YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 0 0 7 0.707 1 2 1 51.189 51.266 2;3 1.6782E-06 14041 20230619_1888_Aki_TMTPro18x_K_F8 181.53 147.28 226490 181720 224840 225770 229550 256490 256630 236860 265060 315100 306380 313780 323770 283340 289770 362670 327360 348330 209390 166750 228630 224800 238770 256600 257470 245460 271480 314160 313220 317590 328340 297420 297740 362160 313000 330930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1314700000 31196 3535 29316 58647;58648;58649;58650 47340;47341;47342 47342 3 9606 Homo sapiens 0.037967055608532974 YLLADCNEAFIK Unmodified 1455.7068 0.70680145 577 A0A024R9J0;O60216;A0A8I5KWV3;B3KUT8;E5RJW1;E5RJK5;E5RFV8;E5RIN7 RAD21 Double-strand-break repair protein rad21 homolog yes no 0 0 0 7 0 1 61.213 61.252 3 0.00019676 18349 20230619_1887_Aki_TMTPro18x_K_F7 98.353 82.464 254420 204510 301220 286130 255580 269060 280840 313740 300590 329430 287010 275900 360120 274390 315240 344320 350920 340230 235590 187900 301280 282100 269510 274370 282560 317740 304920 330350 298270 282550 362900 287010 323450 344570 335340 323240 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 188450000 31197 577 29317 58651 47343 47343 1 9606 Homo sapiens -0.002823676568141309 YLLDSCAPLLR Unmodified 1319.6908 0.69075746 2863 E1NZA1;Q92616;A0A024RBS1;B4DM32 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 1 0 1 60.579 60.579 3 5.0509E-05 18755 20230619_1880_Aki_TMTPro18x_K_F1 131.09 29.606 14630 10486 15655 15719 12184 17118 16866 15558 16294 19479 16863 18215 16980 14313 16205 20474 18000 19280 13525 9646.8 15772 15458 13077 17153 16720 16110 16672 19430 17292 18410 17291 15220 16616 20394 17214 18320 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26001000 31198 2863 29318 58652 47344 47344 1 9606 Homo sapiens 0.04369970896959785 YLLETSGNLDGLEYK Unmodified 1713.8461 0.8461317 426 P43490;A0A024R718;A0A7P0T9I9;A0A7P0T895;A0A7P0T8L3;A0A7P0T973;A0A7P0TAS5;A0A7P0T931;A0A7P0T862;A0A7P0T8D2;A0A0C4DFS8;A0A7P0TA73;A0A7P0TBB7;A0A7P0T941;A0A7P0Z466;B7Z8W6 NAMPT;PBEF1 Nicotinamide phosphoribosyltransferase yes no 0 0 0 5.5 0.5 1 1 62.053 62.103 3 6.1034E-08 19083 20230619_1886_Aki_TMTPro18x_K_F6 136.33 106.97 86154 69989 97823 99691 84099 95936 91307 93151 91683 93555 109790 96817 108000 88954 117050 127340 96049 115770 79750 64314 98201 98169 88609 97202 91738 95393 94098 94618 111670 98013 110650 94043 117780 126670 92239 110010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 311150000 31199 426 29319 58653;58654 47345 47345 1 9606 Homo sapiens 0.01776248441547068 YLLGDMEGR Oxidation (M) 1068.491 0.49099502 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;F5GWI0 DDB1 DNA damage-binding protein 1 yes no 0 1 0 3.5 0.5 1 1 46.057 46.117 2 0.01593 12368 20230619_1882_Aki_TMTPro18x_K_F3 72.038 49.652 124620 107670 112120 133840 135890 122650 126960 128220 128200 145460 161620 149680 147960 123160 129010 161380 153860 157830 115180 98773 115380 132860 138830 125090 128620 131100 131950 146140 163550 150930 150520 129950 133080 161260 147000 149930 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 102790000 31200 1710 29320 58655;58656 47346 47346 1112 1 9606 Homo sapiens -0.040510840507977264 YLLGDMEGR Unmodified 1052.4961 0.4960804 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;A0A7P0TB30;B4DSA8;F5GWI0 DDB1 DNA damage-binding protein 1 yes no 0 0 0 4 0.816 1 1 1 52.938 52.988 2 0.00015123 15361 20230619_1883_Aki_TMTPro18x_K_F4 147.29 116.06 378980 297660 342320 349530 274750 352100 338490 372640 408740 409710 400430 432800 490720 371180 386020 503070 461490 507170 350070 273000 349850 348900 293030 356250 339990 380190 412250 412720 415310 436290 492740 392110 399200 503260 441140 481500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 343450000 31201 1710 29320 58657;58658;58659 47347 47347 1 9606 Homo sapiens -0.02806780188166158 YLLGTSLAR Unmodified 992.56548 0.56548059 3376 Q5T6L4;P00966;A8KAP9;Q5T6L5;Q5T6L6;A0A0S2Z3B6;A0A0S2Z3D8 ASS;ASS1 Argininosuccinate synthase yes no 0 0 0 4.5 0.5 1 1 52.633 52.681 2 1.9885E-05 15210 20230619_1883_Aki_TMTPro18x_K_F4 168.66 113.89 99697 76513 88790 196540 249230 314130 238960 249450 289040 104140 81089 113620 113390 87221 133350 135490 117610 119540 92068 70979 94317 189630 246280 306790 242670 255320 282860 113690 94719 114100 115700 93401 134390 134480 112700 113700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 106850000 31202 3376 29321 58660;58661 47348 47348 1 9606 Homo sapiens 0.06890046822900331 YLLGVQPAWGSAEAVDIDR Unmodified 2059.0375 0.037454724 1879 A0A994J5K1;Q5SXN9;Q10713;Q10713-2 PMPCA Mitochondrial-processing peptidase subunit alpha yes no 0 0 0 6 0.816 1 1 1 63.088 63.13 3 0.010832 19533 20230619_1886_Aki_TMTPro18x_K_F6 57.496 46.234 28972 24062 26358 29640 26507 35923 31189 37612 42937 20144 20583 21612 21435 15964 22644 21943 25662 25918 26772 22074 27025 29558 27726 35861 31536 37819 42107 21371 22218 21697 21909 16987 23167 22177 24526 24574 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 357250000 31203 1879 29322 58662;58663;58664 47349 47349 1 9606 Homo sapiens 0.05029749472714684 YLLQYQEPIPCEQLVTALCDIK Unmodified 2693.3445 0.34446071 3505 P25789;H0YMZ1;H0YN18;H0YL69;B2RDG0;H0YMA1;P25789-2;H0YKT8;H0YKS0;H0YLC2;H0YMV3 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type;Proteasome subunit beta type yes no 0 0 0 8 0 1 65.469 65.489 3 2.6467E-05 20149 20230619_1888_Aki_TMTPro18x_K_F8 87.772 79.278 6429.7 5130.6 6008.8 5044.1 4648.8 7245 6050.6 5003 15405 6959.7 5644.4 5646 10814 6540 5770.7 9186.3 7096.4 6165.3 5941.2 4698 6115.2 5133.6 5012.2 7105.5 6296.3 5319.2 14752 6916.2 6467 5826.2 10621 6865.6 6048 9010.2 6770.5 5891.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21466000 31204 3505 29323 58665 47350 47350 1 9606 Homo sapiens 0.06552225457517125 YLMEEDEDAYK Oxidation (M) 1420.5704 0.57042713 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9 RPL5 60S ribosomal protein L5 yes no 0 1 0 1 0 1 49.126 49.126 3 0.0058108 13995 20230619_1880_Aki_TMTPro18x_K_F1 69.451 63.013 56994 52743 50945 60843 58584 54910 61695 58670 78603 61220 64526 81495 76497 65036 68409 91717 75043 98283 52697 48338 52418 60710 60293 56105 62525 59785 78521 62377 67506 81252 77325 69034 70210 92022 71897 93194 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57526000 31205 1916 29324 58666 47351 47351 1233 1 9606 Homo sapiens -0.12303526677965237 YLMEEDEDAYKK Unmodified 1532.6705 0.67047553 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9 RPL5 60S ribosomal protein L5 yes no 0 0 1 3.14 1.25 1 1 2 2 1 50.113 50.162 3;4 1.4579E-07 14411 20230619_1880_Aki_TMTPro18x_K_F1 165.35 146.07 2224700 1788100 2089200 2274600 1915100 2511500 2488800 2800200 3009700 2970500 2770800 2905500 3459600 2729100 2736300 3425400 3169100 3094900 2055900 1641100 2132800 2260600 2022400 2526900 2492900 2843700 3028200 2990700 2884700 2947000 3473600 2858400 2822800 3410700 3027400 2943300 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 3844599999.9999995 31206 1916 29325 58667;58668;58669;58670;58671;58672;58673 47352;47353;47354;47355;47356;47357 47352 6 9606 Homo sapiens -0.07455289344170524 YLMEEDEDAYKK Oxidation (M) 1548.6654 0.66539015 1916 A2RUM7;P46777;A0A2R8Y6J3;B3KTM6;Q59GX9 RPL5 60S ribosomal protein L5 yes no 0 1 1 3.5 1.12 1 1 1 1 46.427 46.496 3 0.019118 12814 20230619_1881_Aki_TMTPro18x_K_F2 87.641 67.748 361510 282520 311600 365510 388290 393410 402700 379170 425970 453840 482620 454590 534560 409020 450570 525010 472800 489400 333800 259380 322150 362590 397440 395460 405860 390410 435130 454650 494550 460130 539560 429730 461300 523530 452270 465150 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1838399999.9999998 31207 1916 29325 58674;58675;58676;58677 47358 47358 1233 1 9606 Homo sapiens -0.08699593206802092 YLNFFTK Unmodified 931.48035 0.48035398 3437 Q6FHF5;P12004;Q6FI35 PCNA Proliferating cell nuclear antigen yes no 0 0 0 5 0.816 1 1 1 62.07 62.105 2 0.022366 18858 20230619_1885_Aki_TMTPro18x_K_F5 108.7 60.954 3234800 2828500 2919500 2951400 2738500 3706700 2964600 2774400 3577000 3082500 2519600 1950300 2586800 1945100 2727100 3121800 2592500 2102800 2990000 2590500 2990000 2981200 2872100 3669100 2994700 2907000 3567500 3066800 2634700 2033900 2643400 2069500 2765300 3060100 2478400 2009900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2357500000 31208 3437 29326 58678;58679;58680 47359;47360 47360 2 9606 Homo sapiens 0.011873013570948387 YLNIFGESQPNPK Unmodified 1505.7514 0.75144346 4002 Q53GR7;Q9UJS0;Q9UJS0-2;R4GN64;Q75KX8 SLC25A13 Calcium-binding mitochondrial carrier protein Aralar2 yes no 0 0 0 1.5 0.5 1 1 60.203 60.209 3 4.4295E-06 18704 20230619_1881_Aki_TMTPro18x_K_F2 128.36 113.26 53867 54393 58564 53724 52601 59639 57934 57396 60986 72286 68641 66524 83078 65948 63606 82768 60864 63097 49918 49768 58981 54439 55245 59842 58232 59182 62341 72069 70669 67799 83355 68932 64978 81757 58276 60130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 329340000 31209 4002 29327 58681;58682 47361 47361 1 9606 Homo sapiens 0.018797794808961044 YLNQDYEALR Unmodified 1283.6146 0.61461563 4021 Q59EF6;B4E1R7;B2RCM3;P17655 CAPN2 Calpain-2 catalytic subunit yes no 0 0 0 4.5 0.5 1 1 49.91 49.966 2 1.5367E-09 13973 20230619_1883_Aki_TMTPro18x_K_F4 205.83 147.01 88506 64570 80482 92629 69899 86469 99578 89025 106010 119990 133070 145360 139450 127230 125940 151090 159150 176340 81722 59365 82363 91127 74317 87922 98878 91662 108730 120360 135620 145780 141560 133090 130280 152770 152070 167160 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91783000 31210 4021 29328 58683;58684 47362 47362 1 9606 Homo sapiens -0.015847096788320414 YLNQTSR Unmodified 880.44028 0.44028008 3562 Q6IAX1;P37268-5;P37268;E9PNM1;B4DND3;A0A1W2PQ47;E9PJG4 FDFT1 Squalene synthase yes no 0 0 0 7.5 0.5 1 1 34.249 34.286 2 0.01504 7204 20230619_1888_Aki_TMTPro18x_K_F8 111.82 86.517 86455 45719 117290 105150 81931 99194 88440 108080 97422 71106 98928 87739 87871 71299 82289 53839 118640 77495 80002 42396 115970 101170 88068 100820 89234 108800 98657 74352 100870 87779 89777 73209 85597 55818 112880 73506 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 55141000 31211 3562 29329 58685;58686 47363;47364 47364 2 9606 Homo sapiens -0.004722453134718307 YLNTNPVGGLLEYAR Unmodified 1678.8679 0.8678702 1718;4020 A0A7P0Z4F9;A0A7P0Z4K3;P55265-5;P55265;P55265-4;D3DV75;A0A3B3IRQ9;A0A024DAK3;P55265-3;P55265-2;A0A3B3ISU1;A0A3B3ISX1;Q59EC0;B7Z8Y3 ADAR Double-stranded RNA-specific adenosine deaminase no no 0 0 0 2.5 0.5 1 1 62.56 62.579 2 0.0006737 19792 20230619_1881_Aki_TMTPro18x_K_F2 93.203 62.13 58942 48882 58286 64173 54269 62579 60719 64331 71660 66532 63964 65590 73532 60990 67124 78442 71741 74197 54501 44874 59239 63525 56895 63429 61208 65659 72088 67101 66424 66494 74436 63992 68687 78276 68614 70509 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57268000 31212 1718;4020 29330 58687;58688 47365 47365 1 9606 Homo sapiens 0.05559097980835759 YLNTQFIK Unmodified 1025.5546 0.55458155 964 Q13617-2;Q13617;A0A0A0MTN0;A0A8I5QJI3;A0A8I5KYP8;A0A140VKB1;A0A8I5KUA9;A0A8I5KQQ5;Q5T2B5;A0A8I5KU22;A0A0D9SET6;A0A8I5KYZ8;A0A8I5KXB2;A0A8I5KPX0;A0A8I5KS98;A0A8I5KTY5;A0A8I5KVE2;A0A8I5QKN3;A0A8I5KWB8;A0A8I5KV54;A0A8I5KYM7 CUL2 Cullin-2 yes no 0 0 0 3 0 1 55.454 55.495 3 0.021318 16555 20230619_1882_Aki_TMTPro18x_K_F3 73.248 53.084 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31213 964 29331 58689 47366 47366 1 9606 Homo sapiens 0.04282644448608153 YLPALGYSK Unmodified 1010.5437 0.54368251 1102 A0A0S2Z4R1;P54577;A0A6Q8PFX2 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed yes no 0 0 0 3.5 0.5 1 1 56.626 56.647 3 0.010194 16904 20230619_1883_Aki_TMTPro18x_K_F4 64.04 31.517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31214 1102 29332 58690;58691 47367;47368 47368 2 9606 Homo sapiens 0.03883242074323334 YLPDIIK Unmodified 860.50076 0.50075507 2230 Q6IAU5;B2R665;O15355;B4DDC8;B3KXL8 PPM1G Protein phosphatase 1G yes no 0 0 0 8 0 1 59.127 59.168 2 0.017824 17426 20230619_1888_Aki_TMTPro18x_K_F8 108.09 37.057 216320 203050 204790 227290 198650 243470 236210 236300 267870 135070 115650 88145 109760 78426 180650 126740 123440 76344 200120 186030 209070 227810 208070 244770 236880 239220 264620 140730 125560 91492 115510 83806 178980 123950 118340 73218 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138100000 31215 2230 29333 58692 47369 47369 1 9606 Homo sapiens 0.06492472016907413 YLPDTLLLEECGLLR Unmodified 1803.9441 0.94407161 1176 B8XPJ7;B8XPJ8;A0A140VJG8;P21964-2;P21964;E7EMS6 COMT Catechol O-methyltransferase yes no 0 0 0 6 0 1 64.531 64.576 3 9.2258E-14 20158 20230619_1886_Aki_TMTPro18x_K_F6 168 157.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31216 1176 29334 58693 47370 47370 1 9606 Homo sapiens 0.07425733765921905 YLPELMAEK Oxidation (M) 1108.5474 0.54744726 3807;1883 A0A994J7I5;O75525-2;O75525;A0A6Q8PGH5;B3KTS3;Q07666;B4DDX2;Q07666-2;B4E043;Q07666-3;Q5VWX1 KHDRBS3;KHDRBS1;KHDRBS2 KH domain-containing, RNA-binding, signal transduction-associated protein 3;KH domain-containing, RNA-binding, signal transduction-associated protein 1;KH domain-containing, RNA-binding, signal transduction-associated protein 2 no no 0 1 0 5.2 0.748 1 2 2 54.56 54.621 2;3 0.0067321 15650 20230619_1885_Aki_TMTPro18x_K_F5 87.258 62.041 229890 196760 202090 229700 239500 246220 249530 233230 256750 219150 238780 217650 222350 208570 250480 257920 225400 246080 212420 180390 208320 229500 245970 247520 251190 238860 260330 222280 245080 220910 228900 217960 252880 257730 216040 233780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 898210000 31217 1883;3807 29335 58694;58695;58696;58697;58698 47371;47372 47371 1210 2 9606 Homo sapiens -0.0024845621412623586 YLPELMAEK Unmodified 1092.5525 0.55253264 3807;1883 A0A994J7I5;O75525-2;O75525;A0A6Q8PGH5;B3KTS3;Q07666;B4DDX2;Q07666-2;B4E043;Q07666-3;Q5VWX1 KHDRBS3;KHDRBS1;KHDRBS2 KH domain-containing, RNA-binding, signal transduction-associated protein 3;KH domain-containing, RNA-binding, signal transduction-associated protein 1;KH domain-containing, RNA-binding, signal transduction-associated protein 2 no no 0 0 0 6 0.816 2 2 2 60.417 60.468 2;3 3.1287E-06 18275 20230619_1886_Aki_TMTPro18x_K_F6 146.79 125.32 301260 248110 262350 286970 249320 323930 298900 294270 330450 323460 289660 282880 334590 285270 306950 342830 332710 325110 278280 227490 269760 287130 261830 323990 299490 303440 333370 324180 301080 289160 338790 297260 314230 342510 318030 309010 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1049999999.9999999 31218 1883;3807 29335 58699;58700;58701;58702;58703;58704 47373;47374;47375 47374 3 9606 Homo sapiens 0.009958476484825951 YLPENDLKR Unmodified 1146.6033 0.60332266 494 A0A024R861;O00743-2;O00743;A0A0S2Z482 PPP6C Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 1 7 0 1 43.925 44.008 3 0.04278 10939 20230619_1887_Aki_TMTPro18x_K_F7 44.097 18.159 90223 81860 108740 98131 101960 122150 126700 105880 104590 131400 145190 100920 112400 82969 147500 82792 84538 66814 83625 75055 108790 98109 107040 121310 125650 110000 109470 130450 145410 103270 117220 86231 145530 82551 81371 63694 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140770000 31219 494 29336 58705 47376 47376 1 9606 Homo sapiens 0.03588513017712103 YLPHSAGR Unmodified 899.46135 0.46134987 300 M0R0F0;A0A024R4Q8;M0R0R2;P46782;Q53G25 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 0 0 0 4.5 2.29 1 1 1 1 1 1 1 1 31.762 31.814 3 1.7093E-07 6231 20230619_1888_Aki_TMTPro18x_K_F8 195.6 139.59 349690 256340 322970 349620 441220 416990 407180 416000 506030 333720 387300 358160 361200 293460 366690 335030 394210 298920 322930 235530 332170 346240 447670 416600 415450 422790 504630 342700 401650 360470 369720 307020 374080 334160 376250 284650 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 2003099999.9999998 31220 300 29337 58706;58707;58708;58709;58710;58711;58712;58713 47377;47378;47379;47380;47381 47381 5 9606 Homo sapiens 0.007597647860507095 YLPQLAK Unmodified 831.48544 0.48543935 446 Q92947;A0A2L2DH10;A0A2L2DH39;A0A2L2DH25;A0A2L2DH19;A0A2H4G235;A0A2H4G1S8;A0A2H4G0V0;A0A2H4FWZ7;A0A2H4FX81;A0A2H4FX57;A0A2H4FX55;B4DK85;A0A024R7F9;A0A1L3A5U7;A0A2H4FX70;A0A2H4G245;A0A2L2DH21;A0A2H4FX52;Q92947-2;A0A1L3A5T2;B4DQF2;A0A1D6XXQ4;K7EKT3 GCDH Glutaryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 3 0 1 53.338 53.391 3 0.0045195 15653 20230619_1882_Aki_TMTPro18x_K_F3 103.29 76.149 56256 40211 42457 45457 53465 60430 54914 59630 59423 53312 68598 65820 53760 52016 64842 53068 67924 62467 51871 36882 44465 45686 54750 59951 55438 60778 60597 54593 69303 65791 55906 54142 65843 53883 64922 59252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26214000 31221 446 29338 58714 47382 47382 1 9606 Homo sapiens 0.06295605219713707 YLQEEVNINR Unmodified 1276.6412 0.64116473 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;A0A0S2Z5W9;Q9UHD8-4;Q9UHD8-8;Q9UHD8-9;A0A6Q8PHC2;K7EL40;K7EK18;K7ER52;K7EIE4;K7EQD7 SEPT9 Septin-9 yes no 0 0 0 3.5 0.5 1 1 47.586 47.646 2 1.6614E-09 13062 20230619_1882_Aki_TMTPro18x_K_F3 204.79 167.69 359690 297270 333630 345300 306380 391050 389050 368580 443350 509990 464510 491820 552650 424650 419580 525380 506860 506360 332420 272570 340840 345450 323130 391390 389160 381870 449900 507190 479510 497620 554650 445800 434390 524990 484110 481150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 495200000 31222 541 29339 58715;58716 47383;47384 47383 2 9606 Homo sapiens 0.013909792125332388 YLQEEVNINRK Unmodified 1404.7361 0.73612775 541 Q9UHD8;Q9UHD8-7;Q9UHD8-5;Q9UHD8-2;A0A024R8V0;A0A0S2Z5A5;Q9UHD8-3;A0A024R8Q0;A0A0S2Z5W9;Q9UHD8-4;Q9UHD8-8;Q9UHD8-9;A0A6Q8PHC2;K7EL40;K7EK18;K7ER52;K7EIE4;K7EQD7 SEPT9 Septin-9 yes no 0 0 1 6.5 0.5 1 1 45.527 45.614 3 5.6806E-09 11551 20230619_1887_Aki_TMTPro18x_K_F7 175.54 135.52 788060 669770 712910 733110 756640 736430 839080 847180 875370 988150 1005400 975780 1068200 837580 936720 1161200 1125500 1049700 728300 613710 731140 735690 783960 747520 842580 861480 895560 990270 1027900 986910 1081600 885850 966470 1154800 1074500 998430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 705390000 31223 541 29340 58717;58718 47385;47386 47386 2 9606 Homo sapiens 0.04994912683696384 YLQLAEELIRPER Unmodified 1628.8886 0.88860564 3892 Q4ZG57;Q14566;B4E0N7 MCM6 DNA replication licensing factor MCM6 yes no 0 0 1 7.5 0.5 1 1 62.726 62.756 3 6.1316E-12 19019 20230619_1887_Aki_TMTPro18x_K_F7 193.06 154.55 1280200 999710 1130200 1229800 956190 1175800 1177600 1201800 1239800 1531300 1422800 1388300 1520900 1285000 1411500 1633200 1427200 1509600 1182300 917340 1158600 1222500 1014200 1193500 1177100 1234800 1268300 1525000 1455400 1412500 1543700 1347300 1439400 1628200 1366000 1434800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 8102499999.999999 31224 3892 29341 58719;58720 47387;47388 47387 2 9606 Homo sapiens 0.09931688360461521 YLQQIFESQR Unmodified 1310.6619 0.66190017 119 Q96GM5;A0A024R102;A0A024R137;Q96GM5-2;F8VRQ4;A8K9I5;F8VUB0 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 0 0 0 2 0 1 59.214 59.226 2 0.0012091 18304 20230619_1881_Aki_TMTPro18x_K_F2 133.83 91.604 68831 58303 68819 72964 63087 77844 70988 64220 75872 58170 58985 51054 55557 48540 65265 56744 57889 51272 63660 53493 69856 72534 66256 78014 71268 66427 76291 58948 61142 52103 57280 50581 65739 56620 55413 48780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18630000 31225 119 29342 58721 47389 47389 1 9606 Homo sapiens 0.018995695921830702 YLQQPGCLLVGTNMDNR Unmodified 1977.9401 0.94006564 1964 A6NDG6 PGP Phosphoglycolate phosphatase yes yes 0 0 0 2 0 1 58.076 58.091 3 0.00015396 17870 20230619_1881_Aki_TMTPro18x_K_F2 87.669 74.82 19902 15186 18599 18750 16556 24954 25048 21343 27602 15787 15803 12100 16082 11742 16753 15806 16764 18196 18385 13936 18987 18723 17641 24659 24820 21911 27459 16169 16763 12461 16429 12358 17020 15952 16049 17252 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41004000 31226 1964 29343 58722 47390 47390 1 9606 Homo sapiens -0.009786789994677747 YLQSTQAIHDVFSQYK Unmodified 1926.9476 0.94757708 400 A0A024R6K3;Q86TU7;Q6NXR6;Q86TU7-3;Q86TU7-2 SETD3 Histone-lysine N-methyltransferase setd3 yes no 0 0 0 3 0 1 59.617 59.646 3 0.0039435 18291 20230619_1882_Aki_TMTPro18x_K_F3 69.522 54.594 16665 14862 14907 21216 18145 20918 19053 19572 21509 24508 22441 24117 21352 19926 28501 24612 20605 25470 15405 13653 15379 20883 18628 21138 19234 20223 21831 24485 22962 24347 22169 20935 28401 24719 19825 24164 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9923500 31227 400 29344 58723 47391 47391 1 9606 Homo sapiens 0.02118119864098844 YLQWEIGNK Unmodified 1149.5819 0.58185893 4150 Q7L0Y3 TRMT10C Mitochondrial ribonuclease P protein 1 yes yes 0 0 0 1 0 1 58.638 58.638 3 0.00053283 17930 20230619_1880_Aki_TMTPro18x_K_F1 111.61 76.065 62752 53616 62014 72630 66027 86728 68777 78302 101780 85057 74530 74567 95329 78197 67073 97679 89118 86403 58036 49231 63198 71937 68513 86381 70209 80714 100740 85343 78620 76327 95306 81584 70085 97125 85036 82196 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 404370000 31228 4150 29345 58724 47392 47392 1 9606 Homo sapiens 0.013051279889850775 YLREEVK Unmodified 935.50763 0.50763136 4143;1776 A0A8I5KWN8;A0A8I5KVU2;Q92615;Q71RC2-5;Q71RC2;Q71RC2-4;X6RLN4;Q71RC2-2;Q71RC2-6;Q71RC2-3;Q71RC2-7;Q6P4E2;Q96J85 LARP4B;LARP4 La-related protein 4B;La-related protein 4 no no 0 0 1 6 0.816 1 1 1 39.894 39.975 3 0.015067 9417 20230619_1886_Aki_TMTPro18x_K_F6 86.953 33.787 223050 182450 198130 208680 226590 225600 226000 241070 287400 199420 188540 155180 194630 142180 194620 223250 224380 134220 206060 167270 203790 208900 233060 227290 229780 244020 285170 202570 198160 159360 198390 151370 199670 218000 213770 128760 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1253800000 31229 1776;4143 29346 58725;58726;58727 47393;47394 47394 2 9606 Homo sapiens 0.037297848974731096 YLSEVASGDNK Unmodified 1181.5564 0.55643205 3535 V9HWD6;P31946-2;P31946;B5BU24 HEL-S-1;YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 0 0 4.5 0.5 1 1 48.738 48.795 2 7.0444E-12 13230 20230619_1885_Aki_TMTPro18x_K_F5 201.33 158.09 154960 133520 150650 168700 175190 172000 175210 171260 207170 208720 243980 253290 237620 211440 206560 242120 253330 234730 143300 122510 153850 167510 179900 173730 177680 176070 210710 210280 248340 253680 241330 221010 213360 242330 241800 223100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 439170000 31230 3535 29347 58728;58729 47395;47396 47396 2 9606 Homo sapiens -0.027083913240858237 YLSFEAEEK Unmodified 1114.5183 0.51825563 4164 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-6;Q7Z3K3;A0A8V8TQ67;Q7Z3K3-3;B4DSK8 POGZ Pogo transposable element with ZNF domain yes no 0 0 0 3.5 0.5 1 1 53.981 54.015 3 0.001749 15806 20230619_1883_Aki_TMTPro18x_K_F4 92.051 63.355 39065 36674 43475 36838 50532 60785 51710 51343 57149 50624 60332 60054 58962 53030 60012 59918 55046 62673 36189 33569 43875 37533 51989 59431 52243 53061 58012 51508 61701 60319 60277 55282 60735 60262 52769 59470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55576000 31231 4164 29348 58730;58731 47397 47397 1 9606 Homo sapiens -0.03442277238764291 YLSFTPPEK Unmodified 1080.5492 0.54916182 3839 Q13177;A8K5M4 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase yes no 0 0 0 1 0 1 56.435 56.435 3 0.0045677 17000 20230619_1880_Aki_TMTPro18x_K_F1 73.985 56.253 75526 68729 77411 77629 72315 79115 78167 80720 79365 99718 93963 94904 103880 87732 93266 106100 106560 106300 69900 62980 78398 77722 75649 79954 78567 82852 81487 99568 96166 96314 105200 91720 95829 106300 101830 100970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 96828000 31232 3839 29349 58732 47398 47398 1 9606 Homo sapiens 0.012109208661513549 YLSHSEFK Unmodified 1009.4869 0.48689592 2863 E1NZA1;Q92616;A0A024RBS1;B4DM32 PRIC295;GCN1L1 Translational activator GCN1 yes no 0 0 0 7.5 0.5 1 1 42.453 42.492 3 7.0652E-05 10263 20230619_1887_Aki_TMTPro18x_K_F7 168.27 73.167 222210 180240 200190 215270 239650 251930 245650 234720 283650 280300 291430 301010 313350 255440 262670 329640 325460 295290 205290 165320 205880 215010 245950 251640 248480 242210 287210 281490 299620 303130 316690 268900 271810 327960 310590 280940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 267600000 31233 2863 29350 58733;58734 47399;47400 47399 2 9606 Homo sapiens -0.017468054821847545 YLSLHDNK Unmodified 988.49779 0.49779495 223 Q6UXN9;A0A024R333 WDR82;TMEM113 WD repeat-containing protein 82 yes no 0 0 0 7 0 1 42.166 42.241 3 0.021761 10167 20230619_1887_Aki_TMTPro18x_K_F7 74.165 33.813 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31234 223 29351 58735 47401 47401 1 9606 Homo sapiens 0.0030859689210274155 YLSNAYAR Unmodified 956.47158 0.4715802 1305 A0A1U9X8Y4;Q5SRT3;Q53FB0;O00299 CLIC1 Chloride intracellular channel protein;Chloride intracellular channel protein 1 yes no 0 0 0 3.67 3.09 1 1 1 41.715 41.739 2 0.00017469 10583 20230619_1881_Aki_TMTPro18x_K_F2 169.97 143.75 805790 572210 761930 848820 1132700 1214600 1132000 1233300 1304600 754060 876190 818310 796840 704960 966120 750930 994740 770680 744140 526360 783910 838940 1147100 1200300 1146200 1245100 1300400 790510 915740 824580 824300 733210 979700 755810 949930 732610 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 856760000 31235 1305 29352 58736;58737;58738 47402;47403;47404 47403 3 9606 Homo sapiens -0.008396722793918343 YLSQLAEEGLK Unmodified 1249.6554 0.65541781 2628 B4DZ92;Q5T481 RBM20 RNA-binding protein 20 yes no 0 0 0 6.5 0.5 1 1 60.664 60.714 3 0.00064454 18433 20230619_1886_Aki_TMTPro18x_K_F6 78.903 56.37 37585 30185 30284 39987 48394 38418 37322 36760 45206 39024 41728 37837 44512 34533 42691 49446 41136 47337 34694 27717 31678 39537 48450 38970 38509 37743 45475 39298 43076 38396 45230 36535 43398 49307 39417 44960 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 23373000 31236 2628 29353 58739;58740 47405 47405 1 9606 Homo sapiens 0.04057631640807813 YLSSVSSQETQGGPLAPMTGTIEK Unmodified 2480.2105 0.21046965 1146 Q68D27;E9PHF7;A0A0S2Z693;Q96RQ3 DKFZp686B20267;MCCC1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes no 0 0 0 7 0 1 61.007 61.049 3 3.6683E-26 18228 20230619_1887_Aki_TMTPro18x_K_F7 173.43 161.13 21375 17038 21213 24013 24057 27385 23747 23849 27205 26128 28406 29047 32632 25307 28192 32784 32554 36987 19760 15656 21623 23709 24765 27347 24073 24672 27573 26378 29276 29240 32945 26641 29013 33043 31136 35069 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48703000 31237 1146 29354 58741 47406 47406 1 9606 Homo sapiens 0.029572829563221603 YLTAEAFGFK Unmodified 1145.5757 0.57571092 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 0 2.5 0.5 1 1 62.24 62.26 3 5.5896E-06 19607 20230619_1881_Aki_TMTPro18x_K_F2 160.59 110.55 1138100 970130 1039300 975090 966920 1029500 1072100 1069200 1107400 1501000 1429700 1397500 1584300 1352900 1406300 1505300 1451700 1518700 1051900 888280 1062400 986010 1012700 1038600 1076600 1100800 1141000 1490000 1458300 1421600 1603400 1405300 1436200 1510900 1389000 1442100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2986299999.9999995 31238 1426 29355 58742;58743 47407;47408 47407 2 9606 Homo sapiens 0.008746097574885425 YLTEHPDPNNENIVGYNNK Unmodified 2230.0291 0.029074882 1863 A0A994J491;Q6P2Q9;I3L3Z8 PRPF8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 4.5 0.5 1 1 48.613 48.67 3 3.4856E-10 13378 20230619_1883_Aki_TMTPro18x_K_F4 124.43 116.07 32009 26499 31019 37993 28502 34271 33224 33032 40368 44309 43623 44185 48214 39056 36115 49302 48060 58099 29593 24351 31600 37355 29965 34896 33455 34146 40876 44168 44792 44687 48482 41027 37672 49824 45938 55053 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 88547000 31239 1863 29356 58744;58745 47409;47410 47409 2 9606 Homo sapiens -0.03673849234564841 YLTMDDLTTALEGNR Oxidation (M) 1727.8036 0.80361496 634 A0A024RAV0;P54687-4;P54687;P54687-5;P54687-3;P54687-2 BCAT1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 1 0 4 0 1 59.28 59.282 2 3.9568E-10 18059 20230619_1883_Aki_TMTPro18x_K_F4 151.79 143.88 18276 15616 16243 18947 13346 12232 16989 15972 13925 17963 19456 21045 23479 17686 18852 22715 19908 22961 16888 14323 16638 18777 14163 12977 16834 16129 14597 18125 19889 21113 23596 18629 19332 22748 19059 21795 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26686000 31240 634 29357 58746 47411 47411 374 1 9606 Homo sapiens -0.031174699583516485 YLTMDDLTTALEGNR Unmodified 1711.8087 0.80870034 634 A0A024RAV0;P54687-4;P54687;P54687-5;P54687-3;P54687-2 BCAT1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 0 0 6 0.816 1 1 1 63.436 63.478 3 1.5449E-26 19686 20230619_1886_Aki_TMTPro18x_K_F6 242.07 223 378990 336550 393450 427930 273450 349700 317340 383170 410050 521280 395650 434490 532400 413660 527690 603680 515610 522830 350740 308780 396850 423670 295220 360260 320740 392730 412790 516540 413010 444280 538560 437600 536420 598820 493500 497420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 928450000 31241 634 29357 58747;58748;58749 47412;47413 47413 2 9606 Homo sapiens -0.018731660957200802 YLTNAYSR Unmodified 986.48214 0.48214489 2612 B4DWC4;Q6FIC5;Q9Y696;B3KTR3 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 0 0 2.5 0.5 1 1 42.248 42.319 2 0.0017928 10849 20230619_1881_Aki_TMTPro18x_K_F2 153.73 137.19 422400 350890 381460 303760 364470 421890 385840 383780 433800 369800 349670 293770 367640 271870 392690 421180 388500 273520 390310 320950 390180 312700 380810 417020 389360 394140 435810 372320 363260 301360 375610 289070 398760 412540 370960 261780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 780160000 31242 2612 29358 58750;58751 47414 47414 1 9606 Homo sapiens -0.011636896249569872 YLTNAYSRDEFTNTCPSDK Unmodified 2280.9957 0.99572584 2612 B4DWC4;Q6FIC5;Q9Y696;B3KTR3 CLIC4 Chloride intracellular channel protein;Chloride intracellular channel protein 4 yes no 0 0 1 6 0 1 49.305 49.382 3 3.7857E-08 13628 20230619_1886_Aki_TMTPro18x_K_F6 110.77 103.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31243 2612 29359 58752 47415 47415 1 9606 Homo sapiens -0.09353219068771068 YLTSFPIDDR Unmodified 1225.5979 0.59790293 3397 P07199;Q71VN3 CENPB Major centromere autoantigen B yes no 0 0 0 5 0 1 57.226 57.285 2 0.010086 16793 20230619_1885_Aki_TMTPro18x_K_F5 78.516 56.556 47723 45604 43997 49840 44361 45440 50426 52334 49557 47564 45531 42350 48014 37744 52326 43767 59501 40391 44146 41770 45041 49951 46179 46468 50478 52862 50386 48152 47016 43082 49121 39420 53471 43731 56729 38470 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12956000 31244 3397 29360 58753 47416 47416 1 9606 Homo sapiens -0.005872105647767967 YLTTAVITNK Unmodified 1122.6285 0.62847478 1659 P60228;A0A7I2V3I0;Q6IAX5;A0A7I2V3S3;A0A7I2V2H9;A0A7I2V2W0;B2R806;A0A7I2V5Z6;B3KW56;A0A7I2V4B4;A0A7I2V3I2;E5RGA2;A0A7I2V5P9;E5RHS5 EIF3E Eukaryotic translation initiation factor 3 subunit E yes no 0 0 0 3 0 1 54.025 54.077 2 1.0479999999999999E-19 15963 20230619_1882_Aki_TMTPro18x_K_F3 262.84 191.12 284480 235720 249780 266080 227350 317950 298800 289070 317740 380390 341720 334730 404210 305200 268110 423920 378240 383910 262810 216070 256490 266950 240430 316800 297740 299700 323970 378060 352000 340960 403910 322250 281970 421360 360870 365040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 379660000 31245 1659 29361 58754 47417 47417 1 9606 Homo sapiens 0.07206567820276177 YLTVAAVFR Unmodified 1038.5862 0.58621603 3748;1486;3381 P07437;B4DY90;Q5SU16;A0A384NYT8;Q5JP53;B7ZAF0;Q6LC01;Q5ST81;B4E052;Q9BUU9;B7ZAK1;B4DMU8;B4DXZ5;Q96B85;Q1KSF8;A4UCT2;Q8IZ29;P68371;Q8N6N5;Q8IWP6;B3KML9;Q96HX0;P04350;B4DJ43;B4DE77;B4DFH6 TUBB;XTP3TPATP1;TUBB2C;TUBB4B;TUBB4A Tubulin beta chain;Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 0 0 6.5 1.12 1 1 1 1 61.009 61.055 2 0.0001335 18185 20230619_1888_Aki_TMTPro18x_K_F8 164.53 132.31 2314200 2267800 1738200 1326500 2413100 5439900 484200 2723200 2115700 84501 120450 154340 186580 136820 498300 168260 173600 165130 2138100 2068300 1822800 1472200 2430200 5120100 656670 2888300 1972700 212510 203470 154330 203210 143380 481450 169470 169180 156910 4 4 4 4 4 4 4 4 3 3 2 4 4 4 4 4 4 4 2462500000 31246 1486;3748;3381 29362 58755;58756;58757;58758 47418;47419;47420;47421 47421 4 9606 Homo sapiens 0.06846637202556849 YLTVATVFR Unmodified 1068.5968 0.59678072 983;2562;3176 Q9BV28;A0A0B4J269;Q13509;Q53G92;B2RBD5;Q13509-2;Q3ZCR3;B4DP54;Q9BUF5;B4E386;B3KS31;K7ESM5 TUBB3;TUBB6 Tubulin beta-3 chain;Tubulin beta-6 chain no no 0 0 0 6.5 1.12 1 1 1 1 59.704 59.754 2 1.0987E-05 17786 20230619_1885_Aki_TMTPro18x_K_F5 175.44 107.46 2788300 2602600 2430700 2177700 2128600 3084600 1856600 2378000 2767200 408050 355720 265110 314090 271890 1155100 380260 404350 276000 2577800 2379000 2492900 2248700 2236600 3033900 1917200 2424100 2664000 518460 477640 278030 362510 285930 1114000 377070 393250 263720 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 890550000 31247 983;2562;3176 29363 58759;58760;58761;58762 47422;47423;47424;47425 47422 4 9606 Homo sapiens 0.06522619856968959 YLVELGCIK Unmodified 1093.5842 0.58416712 3632 Q5BKZ2;P52294;B3KXZ2;B3KWR2 KPNA1 Importin subunit alpha;Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes no 0 0 0 1 0 1 61.202 61.202 3 0.002441 18960 20230619_1880_Aki_TMTPro18x_K_F1 78.934 41.459 39242 31365 39165 37165 36150 40168 46619 41975 54196 45600 39692 37875 50129 47297 35383 57890 53366 45905 36280 28768 39741 37114 38074 40436 46612 42859 54199 45692 41838 39158 50191 49007 37353 57269 50835 43756 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26366000 31248 3632 29364 58763 47426 47426 1 9606 Homo sapiens 0.04111840402447342 YLVIDEAHR Unmodified 1114.5771 0.57710791 2629;940 Q86UA8;A0A0A0MRP6;B7ZLQ5;P28370-2;P28370;D7EZH4;B7ZAX9;B4DZC0;O60264;Q4W5H1 SMARCA1;SMARCA5 Probable global transcription activator SNF2L1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 no no 0 0 0 4 0.816 1 1 1 43.431 43.495 3 5.1277E-09 11039 20230619_1883_Aki_TMTPro18x_K_F4 211.48 178.59 208890 157960 179600 186010 209930 255520 197910 178360 225060 227700 222330 233610 278650 207160 238270 259440 239800 226260 192840 144900 185390 186410 215630 251310 201080 188900 227810 227750 230780 235980 280460 217410 243190 257980 229330 215300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 644060000 31249 940;2629 29365 58764;58765;58766 47427;47428;47429 47429 3 9606 Homo sapiens 0.024402438462402642 YLVLDEADR Unmodified 1092.5451 0.54513908 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;Q5S4N1;B4E132;B4E010;D6RCM4;Q9NQI0-3;Q9NQI0-4;Q9NQI0-2;Q9NQI0 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 yes no 0 0 0 2 0.816 1 1 1 52.043 52.077 2 5.4154E-08 15343 20230619_1881_Aki_TMTPro18x_K_F2 197.3 172.38 607770 499910 624540 600380 525070 683910 668340 636220 729320 775290 674300 663660 804570 648360 632910 800610 744360 791900 562130 458520 631560 599320 557860 683940 667540 656940 737920 772730 699950 678290 808720 677680 653690 801100 711450 752070 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 796130000 31250 1018 29366 58767;58768;58769 47430 47430 1 9606 Homo sapiens 0.002568313724395921 YLVMDEADR Unmodified 1110.5016 0.5015597 633 Q53GJ1;Q9H4E3;A0A024RAS3;Q9H0S4-2;Q9H0S4;A4UCU0;F5H1N9 E4-DBP;hCG_27698;DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 0 0 0 1.5 0.5 1 1 49.117 49.149 2 0.0033156 14030 20230619_1881_Aki_TMTPro18x_K_F2 98.233 25.025 182420 160240 167240 185230 188560 211680 209470 200000 221210 226810 219220 224400 242760 193350 224750 264260 268710 249320 168640 146880 171600 185370 194770 211800 210330 205860 224730 227700 226110 226910 246130 204270 231490 263460 256540 237040 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108090000 31251 633 29367 58770;58771 47431 47431 1 9606 Homo sapiens -0.0492710139637893 YLYEIAR Unmodified 926.48617 0.48616764 2776 CON__P02769;B4DPR2;P02768;B4DPP6;H0YA55;CON__P02768-1;F6KPG5;A0A0C4DGB6;A8K9P0;B2RBS8;Q56G89;H7C013 ALB Serum albumin yes no 0 0 0 7 0.816 1 1 1 51.101 51.178 2 0.013271 14027 20230619_1888_Aki_TMTPro18x_K_F8 114.19 0 + 190260 496000 585630 198110 1436100 1802000 835630 843040 1329200 398480 367820 473730 237890 306410 416000 360450 476890 637050 181350 450800 572890 246140 1409900 1678300 891360 913770 1285700 431630 417840 471650 256790 324400 423000 376870 456810 601550 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2065499999.9999998 31252 2776 29368 58772;58773;58774 47432;47433 47433 2 9606 Homo sapiens 0.01998399868762135 YLYHGNTNPELAFESAK Unmodified 1952.9268 0.92684164 4301 Q92621 NUP205 Nuclear pore complex protein Nup205 yes yes 0 0 0 7 0 1 53.128 53.198 3 5.7274E-07 14999 20230619_1887_Aki_TMTPro18x_K_F7 121.19 111.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31253 4301 29369 58775 47434 47434 1 9606 Homo sapiens -0.01150470515494817 YLYLTPQDYK Unmodified 1302.6496 0.64960415 3833 Q13085;Q13085-3;Q13085-2;Q13085-4;A0A024R0Y2;Q59FY4;Q7Z5W8;A0A087WWN5 ACACA;hCG_30204 Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 1.5 0.5 1 1 59.288 59.294 3 0.00050827 18177 20230619_1880_Aki_TMTPro18x_K_F1 101.65 86.38 51776 45075 57573 65543 33067 42349 35650 38972 41821 55992 56629 55614 65448 49584 48883 86138 62674 64229 47940 41420 57667 64176 36400 44491 36074 40554 42915 55640 57763 56341 65696 53271 50971 84626 59843 61231 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80866000 31254 3833 29370 58776;58777 47435 47435 1 9606 Homo sapiens 0.01038533129121788 YLYPNIDK Unmodified 1024.5229 0.52294707 1598 P42224;P42224-2;A0A669KB53;A0A669KBA4;A0A669KB56;A0A669KB68;A0A8V8TN81;A0A669KBI6;J3KPM9;A0A510GDC6 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription yes no 0 0 0 8 0 1 53.663 53.734 3 0.08402 15154 20230619_1888_Aki_TMTPro18x_K_F8 52.482 17.126 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31255 1598 29371 58778 47436 47436 1 9606 Homo sapiens 0.011666516946434058 YLYSSEDYIK Unmodified 1279.5972 0.59723423 3840 Q59EG8;Q13200;B4DM22;Q9NSM5;Q13200-3;Q13200-2;Q13041 PSMD2;DKFZp564A2282 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 5.5 0.5 1 1 55.23 55.301 2 5.1181E-14 16135 20230619_1886_Aki_TMTPro18x_K_F6 237.08 189.88 86030 72461 80055 90385 78871 98578 99723 94099 106020 122170 110750 106110 135750 103120 106090 141790 130750 133230 79518 66481 81891 89904 82671 98932 99524 97192 107960 121460 114450 108400 136280 108590 109960 141270 124880 126620 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190580000 31256 3840 29372 58779;58780 47437 47437 1 9606 Homo sapiens -0.031380500044633663 YLYTLVITDK Unmodified 1227.6751 0.67509062 531 A0A024R8P8;P63173;J3KT73;J3QL01 RPL38 60S ribosomal protein L38 yes no 0 0 0 2.5 0.5 1 1 62.875 62.894 3 0.0018276 19902 20230619_1881_Aki_TMTPro18x_K_F2 86.898 64.7 520530 452780 510780 544370 492040 534250 553000 511080 633060 537440 599290 608600 635300 530660 613460 701460 613600 736730 481440 415220 519590 542160 514210 540590 556530 524750 638740 544130 618190 612290 646150 559060 624740 703820 587940 698930 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1683499999.9999998 31257 531 29373 58781;58782 47438;47439;47440 47438 3 9606 Homo sapiens 0.0703600765154988 YLYYTGR Unmodified 934.45487 0.45486751 2361 B3KNN7;B4DEB0;O43242;Q96N86;Q8N9M2;Q6IBN0;B4DV84;B4DPM7;O43242-2 PSMD3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 3 0 1 46.712 46.79 2 0.072565 12652 20230619_1882_Aki_TMTPro18x_K_F3 76.035 55.133 278890 227900 256170 277390 273360 305390 306800 289670 322600 339260 333560 340210 379050 304930 314230 409820 370540 355370 257710 209070 262530 276450 283530 306350 307880 298390 328390 340220 343730 344250 382260 321250 324300 406830 353880 338170 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 336930000 31258 2361 29374 58783 47441 47441 1 9606 Homo sapiens -0.014981731653392671 YMACCLLYR Oxidation (M) 1264.5403 0.54027017 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;A6NHL2-2;A6NHL2;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;B4DQK4;Q9UQM3;Q8N532 TUBA1B;TUBAL3;TUBA4A;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 0 1 0 4 1.41 1 1 1 1 1 49.497 49.562 2 0.0025039 13773 20230619_1883_Aki_TMTPro18x_K_F4 98.503 73.249 1128500 1067800 875070 960550 1350300 1573500 1181400 1203600 1819800 679330 716150 743150 800120 646720 685240 807620 825180 821070 1042500 976560 917790 987350 1363000 1536400 1219300 1240700 1770400 719310 790330 748930 809000 678950 707200 809380 788150 779730 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3048499999.9999995 31259 2408;3747;4144 29375 58784;58785;58786;58787;58788 47442;47443 47443 1488 2 9606 Homo sapiens -0.0814183535783286 YMACCLLYR Unmodified 1248.5454 0.54535555 2408;4144;3747 P68363;B3KT06;A8JZY9;B3KPS3;P68363-2;B4DDU2;A6NHL2-2;A6NHL2;P68366-2;P68366;Q71U36;Q71U36-2;F5H5D3;Q9BQE3;Q53GA7;B7Z1K5;B4DQK4;Q9UQM3;Q8N532 TUBA1B;TUBAL3;TUBA4A;TUBA1A;TUBA1C Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain no no 0 0 0 4.5 0.5 1 1 54.37 54.412 2 0.0001138 15569 20230619_1885_Aki_TMTPro18x_K_F5 153.38 115.66 416120 403780 321510 279450 433600 777010 433800 450960 782020 76720 71329 103980 101740 92618 149840 120280 112380 129270 384500 368610 336310 299220 444890 739910 447400 472770 746270 100220 108210 104240 105570 97340 149290 121020 108000 122620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 4505200000 31260 2408;3747;4144 29375 58789;58790 47444;47445 47445 2 9606 Homo sapiens -0.0689753149522403 YMAEALLLR Unmodified 1078.5845 0.58450147 2627 B4DZ87;O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 0 0 1.5 0.5 1 1 61.213 61.219 2 0.00057172 18949 20230619_1880_Aki_TMTPro18x_K_F1 131.06 76.905 299690 264200 287390 325440 258920 328080 338830 332140 373820 302930 278450 304080 296780 269210 384910 327440 327720 357790 277160 242320 292850 323660 273690 331540 338030 338330 374880 307860 291430 307440 306630 281920 386390 330000 314320 339400 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 377120000 31261 2627 29376 58791;58792 47446;47447 47446 2 9606 Homo sapiens 0.04835260122285945 YMAEALLLR Oxidation (M) 1094.5794 0.57941609 2627 B4DZ87;O94826 TOMM70A Mitochondrial import receptor subunit TOM70 yes no 0 1 0 7.5 0.5 1 1 54.285 54.353 2 0.07125 15387 20230619_1888_Aki_TMTPro18x_K_F8 60.074 44.992 100690 75907 91073 112120 119140 121940 116940 119570 139730 110580 119310 123590 123350 109270 123760 142210 131710 150500 92988 69803 93858 110320 121440 122480 118710 122080 140180 112680 123600 124460 125830 114920 126390 142770 126080 142790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 99409000 31262 2627 29376 58793;58794 47448 47448 1579 1 9606 Homo sapiens 0.03590956259677114 YMDAWNTVSR Oxidation (M) 1257.5448 0.5448215 3153 K7EIT2;Q9Y5L4 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes no 0 1 0 7 0 1 46.842 46.93 2 0.001326 12178 20230619_1887_Aki_TMTPro18x_K_F7 102.55 95.165 52632 40667 45850 48508 59502 59359 49102 50381 61360 53794 54107 53248 60279 46276 54939 60092 58829 56356 48599 37307 47345 48485 60435 59018 50496 52174 61541 54191 56119 53861 61043 48715 56201 59943 56233 53576 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61693000 31263 3153 29377 58795 47449 47449 1838 1 9606 Homo sapiens -0.07364911619106351 YMDAWNTVSR Unmodified 1241.5499 0.54990688 3153 K7EIT2;Q9Y5L4 TIMM13 Mitochondrial import inner membrane translocase subunit Tim13 yes no 0 0 0 8 0 1 52.795 52.87 2 0.00023682 14806 20230619_1888_Aki_TMTPro18x_K_F8 152.97 127.35 108100 102130 116740 109700 106000 153140 114950 120310 143800 119670 108950 106660 121750 95155 111170 119980 124070 118330 100120 93533 117710 110770 111500 150740 116310 125110 143450 120660 113970 108490 123320 99904 113990 120060 118550 112430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144270000 31264 3153 29377 58796 47450 47450 1 9606 Homo sapiens -0.06120607756474783 YMEAFKPFLGIGLK Oxidation (M) 1628.8636 0.86363645 3904 Q14974;B2RBR9;Q14974-2;B7Z752;B7Z5M1;J3KTM9 KPNB1 Importin subunit beta-1 yes no 0 1 1 4.5 0.5 1 1 62.334 62.36 3 0.074486 18982 20230619_1885_Aki_TMTPro18x_K_F5 45.79 33.814 522500 380320 442970 563960 486160 558260 573960 570000 628650 594930 627510 526180 614270 442700 535540 582130 484040 360280 482200 349800 458060 554030 504280 564950 575250 582220 637170 597810 642550 534840 622900 466830 543350 570360 462770 345000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 395860000 31265 3904 29378 58797;58798 47451 47451 2582 1 9606 Homo sapiens 0.07435917233510736 YMEHEERPK Unmodified 1217.5499 0.54990688 1249 Q53ZP9;A0A140VKE7;B4DZR0;O95757;E9PDE8;B4DXT2 HSPA4L Heat shock 70 kDa protein 4L yes no 0 0 1 3.5 0.5 1 1 31.997 32.067 4 0.0010476 6406 20230619_1882_Aki_TMTPro18x_K_F3 114.97 99.078 30831 25368 36734 41371 28666 28145 26731 29942 30742 43848 46855 47510 46488 41364 37136 47724 57761 44429 28554 23349 36715 40269 30325 29505 27244 30858 31788 43651 47288 47848 47041 43190 39117 47646 54974 42283 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24809000 31266 1249 29379 58799;58800 47452 47452 1 9606 Homo sapiens -0.05016607756465419 YMEVSGNLR Oxidation (M) 1083.5019 0.50189405 2066 B3KY12;A8K7V1;A8K566;Q12874;Q53HM6 SF3A3 Splicing factor 3A subunit 3 yes no 0 1 0 5 0.816 1 1 1 39.728 39.802 2 0.0096933 9368 20230619_1885_Aki_TMTPro18x_K_F5 80.219 47.899 137190 103980 130470 148040 180640 172750 165970 176990 201130 162770 199480 197850 172850 167400 181600 172340 227120 197760 126750 95572 133930 146150 183110 172920 169280 180110 202690 166380 203590 198250 177870 173860 186960 174580 216670 187670 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 154860000 31267 2066 29380 58801;58802;58803 47453 47453 1295 1 9606 Homo sapiens -0.036516816765242766 YMFSRPFR Unmodified 1102.5382 0.53821998 3593 Q6IAX2;P46778;M0R181;G3V1B3;M0R3I5 RPL21 60S ribosomal protein L21 yes no 0 0 1 8 0 1 46.247 46.286 3 0.0097076 12001 20230619_1888_Aki_TMTPro18x_K_F8 77.046 45.674 48855 47983 41501 44030 37108 40902 48299 49429 45875 34680 23029 18067 23737 20037 31772 29527 28840 18530 45175 43883 42721 44803 39193 41827 47972 49507 45950 35339 24731 19190 24597 21105 31988 28915 27551 17755 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33472000 31268 3593 29381 58804 47454 47454 1 9606 Homo sapiens -0.008947599891371283 YMGDLSGGQVLK Oxidation (M) 1282.6227 0.62273747 3103 I3L159;I3L1F5;Q6IBP2;Q6FHB5;Q53HF1;P30519;B3KSE0;A0A087WT44;P30519-2 HMOX2 Heme oxygenase 2 yes no 0 1 0 7 0 1 49.695 49.779 3 1.6423E-05 13457 20230619_1887_Aki_TMTPro18x_K_F7 122.7 97.314 81465 67676 80563 79578 80601 89649 87409 89557 101590 93809 94502 98222 106810 85137 96484 122280 104700 113910 75329 62058 81909 79549 83921 89896 88197 91599 102420 94722 97861 99123 108100 90229 98895 121730 100170 108250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91109000 31269 3103 29382 58805 47455 47455 1802 1 9606 Homo sapiens -0.007268987536917848 YMGDLSGGQVLK Unmodified 1266.6278 0.62782285 3103 I3L159;I3L1F5;Q6IBP2;Q6FHB5;Q53HF1;P30519;B3KSE0;A0A087WT44;P30519-2 HMOX2 Heme oxygenase 2 yes no 0 0 0 8 0 1 55.059 55.126 2 0.0077867 15766 20230619_1888_Aki_TMTPro18x_K_F8 81.017 43.905 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31270 3103 29382 58806 47456 47456 1 9606 Homo sapiens 0.005174051089170462 YMHLFSTIK Unmodified 1138.5845 0.58450147 968 A0A0A0N0N2;P26992;B3KXJ2;Q5T8H6 CNTFR Ciliary neurotrophic factor receptor subunit alpha yes no 0 0 0 5 0 1 55.132 55.199 3 0.035158 15964 20230619_1885_Aki_TMTPro18x_K_F5 54.982 28.863 40298 30311 37980 39163 39167 46751 41084 42591 53328 32049 30697 32696 32414 32408 36407 35636 33125 33818 37226 27832 38802 38919 40695 46586 41684 43513 52673 33024 32663 33162 33259 33585 36766 35666 31731 32137 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17065000 31271 968 29383 58807 47457 47457 1 9606 Homo sapiens 0.020752601222966405 YMHSGPVVAMVWEGLNVVK 2 Oxidation (M) 2147.0544 0.054367116 3490;1446 A0A384MTW7;P15531;P15531-2;E7ERL0;Q32Q12;P22392-2;J3KPD9 NME1;NME1-NME2;NME2 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 2 0 3 0 1 60.643 60.672 3 1.5909E-07 18645 20230619_1882_Aki_TMTPro18x_K_F3 110.04 93.36 52582 28315 43962 58831 61810 43763 54987 47677 53372 48091 63275 57253 52031 48102 52533 57701 53976 65645 48452 26207 45700 56638 62419 45509 55778 48513 54828 48859 63928 57440 53502 50417 53526 58257 51711 62223 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15515000 31272 1446;3490 29384 58808 47458;47459 47459 938;939 2 9606 Homo sapiens 0.026722107626028446 YMHSGPVVAMVWEGLNVVK Oxidation (M) 2131.0595 0.059452494 3490;1446 A0A384MTW7;P15531;P15531-2;E7ERL0;Q32Q12;P22392-2;J3KPD9 NME1;NME1-NME2;NME2 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 1 0 3 0 1 61.832 61.862 4 5.2997E-07 19123 20230619_1882_Aki_TMTPro18x_K_F3 106.36 97.31 35406 22380 31982 38569 33956 33561 34783 35477 38380 34425 34159 38198 36948 33394 40880 42545 37209 45331 32666 20638 32835 37526 35115 34349 35141 36099 38730 34964 35413 38447 37820 35083 41310 42756 35693 42997 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 146360000 31273 1446;3490 29384 58809 47460 47460 938;939 1 9606 Homo sapiens 0.03916514625234413 YMIVDEGHR Oxidation (M) 1134.5128 0.51279309 1348;1872 P51532-5;A7E2E1;B9EGQ8;P51532-2;A0A994J6Y9;P51532-4;A0A2R8Y7S2;P51532-3;A0A2R8Y4P4;P51532;Q9HBD4;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A994J4Z2;A0A2R8Y4C5;A0A2R8Y7F3;A0A2R8Y6N0;A0A2R8Y7Y7;A0A2R8Y6V2;A0A2R8YF58;A0A2R8Y526;A0A2R8YDA1;Q59FZ6;A0A2R8YF80;A0A2R8YGP5;B4E0F1;B4DSI8;A0A2R8YFV8;A0A2R8Y4R6;A0A2R8YCY3;B4DSC8;A0A994J4Z7;P51531-2;P51531;B4DK35;A0A994J501;A0A0U1RQZ9;F6VDE0;A0A994HRU5 SMARCA4;SMARCA2 Transcription activator BRG1;Probable global transcription activator SNF2L2 no no 0 1 0 2.5 0.5 1 1 36.022 36.078 3 1.5127E-05 8002 20230619_1882_Aki_TMTPro18x_K_F3 160.56 131.4 52991 40254 56128 47644 62380 62020 60277 60939 68522 57712 74797 69422 63792 57665 63961 57217 74241 68603 49001 36928 56789 47728 64186 61619 61175 62229 69529 58868 75930 69560 65490 59842 65563 58172 70895 65059 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 85821000 31274 1348;1872 29385 58810;58811 47461;47462 47462 852 2 9606 Homo sapiens -0.04908279302230767 YMLLPNQVWDSIIQQATK Oxidation (M) 2163.1034 0.1034258 3228 O14980;A0A7I2V461;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;B3KWD0 XPO1 Exportin-1 yes no 0 1 0 4 0 1 65.841 65.853 3 0.026263 20760 20230619_1883_Aki_TMTPro18x_K_F4 45.618 31.588 12025 9249.9 9772 10064 10665 9338.3 11270 10994 10390 12629 13261 15391 12481 11870 13664 14551 14957 16872 11098 8478.5 10126 10095 11006 9547.1 11305 11164 10759 12750 13456 15373 12829 12498 13950 14706 14312 15993 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6354400 31275 3228 29386 58812 47463 47463 1904 1 9606 Homo sapiens 0.06839822323308908 YMLLPNQVWDSIIQQATK Unmodified 2147.1085 0.10851118 3228 O14980;A0A7I2V461;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V6B9;A0A7I2V3N0;A0A7I2V488;A0A7I2V4A3;B7ZB16;B4DR01;B3KWD0 XPO1 Exportin-1 yes no 0 0 0 5 0 1 66.865 66.907 3 5.1053E-14 20935 20230619_1885_Aki_TMTPro18x_K_F5 161.08 141.75 28408 26416 30766 29331 22469 30836 30221 25762 24647 35808 30789 34629 35974 28457 36710 38765 31816 36528 26308 24201 30931 29413 24224 30948 29864 26956 25728 35593 31570 34982 36561 30111 37059 38658 30522 34701 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 41467000 31276 3228 29386 58813 47464;47465 47465 2 9606 Homo sapiens 0.08084126185895002 YMNSGPVVAMVWEGLNVVK 2 Oxidation (M) 2124.0384 0.038382701 3490;3276 O60361;Q32Q12;P22392-2;Q6FHN3;P22392 NME2P1;NME1-NME2;NME2 Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 2 0 3 0 1 63.476 63.507 3 9.1501E-06 19911 20230619_1882_Aki_TMTPro18x_K_F3 95.094 80.005 17885 16503 17182 19342 17911 18044 21285 20527 18638 22943 25626 21515 21427 20278 20160 22408 24656 25866 16546 15127 17537 19289 18613 18410 21190 20867 19425 23001 25753 21877 21956 21071 20784 22671 23555 24527 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 48726000 31277 3276;3490 29387 58814 47466 47466 1928;1929 1 9606 Homo sapiens 0.021325045257071906 YMNSGPVVAMVWEGLNVVK Oxidation (M) 2108.0435 0.043468079 3490;3276 O60361;Q32Q12;P22392-2;Q6FHN3;P22392 NME2P1;NME1-NME2;NME2 Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 1 0 3.33 0.471 2 1 65.045 65.07 3 1.7359E-15 20277 20230619_1882_Aki_TMTPro18x_K_F3 167.35 152.09 58273 39356 48574 53513 51845 44998 64524 52847 64247 54800 73720 63310 55736 52821 60185 61694 56418 61269 53750 36174 50222 52769 53841 46357 64287 53554 65757 55544 74343 63583 57688 55267 60929 61834 54051 58180 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 123730000 31278 3276;3490 29387 58815;58816;58817 47467;47468;47469 47467 1928;1929 3 9606 Homo sapiens 0.03376808388338759 YMNSGPVVAMVWEGLNVVK Unmodified 2092.0486 0.048553457 3490;3276 O60361;Q32Q12;P22392-2;Q6FHN3;P22392 NME2P1;NME1-NME2;NME2 Putative nucleoside diphosphate kinase;Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B no no 0 0 0 4.5 0.5 1 1 66.357 66.385 3 1.3031E-10 20722 20230619_1885_Aki_TMTPro18x_K_F5 137.73 122.13 15994 12158 12509 14062 10013 14544 13990 14594 14768 16019 17492 16121 16148 14338 17325 16193 14003 20217 14756 11151 12973 14054 10741 14664 13907 14943 15109 16112 17755 16304 16576 14953 17410 16471 13473 19137 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 15537000 31279 3276;3490 29387 58818;58819 47470;47471 47471 2 9606 Homo sapiens 0.04621112250970327 YMPQFMK Oxidation (M) 959.4245 0.42449536 2964 H0YG54;H0YGR4;F5GYG5;Q9Y3B8-2;Q9Y3B8-3;Q9Y3B8 REXO2 Oligoribonuclease, mitochondrial yes no 0 1 0 3 0 1 51.908 51.974 2 0.080276 15028 20230619_1882_Aki_TMTPro18x_K_F3 69.432 28.486 52104 44994 50609 54318 61414 71131 66953 62659 75339 48474 45206 33102 47849 30802 50561 52331 48620 41804 48184 41264 51733 54305 63116 70444 67402 64212 75005 49341 47852 34306 48827 33035 51266 51644 46491 39842 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33451000 31280 2964 29388 58820 47472 47472 1756 1 9606 Homo sapiens -0.05683991146372591 YMPQFMK Unmodified 943.42958 0.42958073 2964 H0YG54;H0YGR4;F5GYG5;Q9Y3B8-2;Q9Y3B8-3;Q9Y3B8 REXO2 Oligoribonuclease, mitochondrial yes no 0 0 0 3.5 0.5 1 1 56.281 56.303 2 0.02392 16902 20230619_1882_Aki_TMTPro18x_K_F3 99.919 35.054 76195 68080 76318 72930 68211 83115 85320 76210 93035 72912 58994 51708 71143 52893 69475 76404 68017 59157 70497 62359 77390 73429 72008 83122 85244 78260 92963 73274 62636 53547 72110 55797 70631 75418 65031 56403 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 136840000 31281 2964 29388 58821;58822 47473 47473 1 9606 Homo sapiens -0.0443968728376376 YMPQNPCIIATK Oxidation (M) 1450.6949 0.69485656 3814 Q09028-3;Q09028-2;Q09028;Q09028-4 RBBP4 Histone-binding protein RBBP4 yes no 0 1 0 1.5 0.5 1 1 49.638 49.696 3 1.6784E-05 14257 20230619_1881_Aki_TMTPro18x_K_F2 122.18 99.261 223970 179380 199510 203100 231490 243880 231580 229480 265570 193170 202870 175840 225810 160500 190250 217970 205100 189840 206880 164450 205190 203760 237920 243250 234510 234440 265960 196780 211900 178990 227860 169230 195050 216470 195990 180670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 383930000 31282 3814 29389 58823;58824 47474;47475 47475 2497 2 9606 Homo sapiens -0.01246307671658542 YMPQNPCIIATK Unmodified 1434.6999 0.69994194 3814 Q09028-3;Q09028-2;Q09028;Q09028-4 RBBP4 Histone-binding protein RBBP4 yes no 0 0 0 2.5 0.5 1 1 53.823 53.864 3 1.0494E-05 16094 20230619_1881_Aki_TMTPro18x_K_F2 134.75 120.6 416120 343460 381620 397590 343590 379600 427010 423320 418330 508700 438680 437620 549020 422800 421150 561870 485090 483770 384540 314910 390070 397020 362100 386330 425570 431700 428120 507150 453900 447080 550480 444140 434810 557610 463510 460320 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 715210000 31283 3814 29389 58825;58826 47476;47477;47478 47477 3 9606 Homo sapiens -2.003809026973613E-05 YMPQNPHIIATK Oxidation (M) 1427.7231 0.72312022 2910 E9PC52;Q6FHQ0;Q16576;Q16576-2;A8K6A2;Q5JP01 RBBP7 Histone-binding protein RBBP7 yes no 0 1 0 1.5 0.5 1 1 42.572 42.611 3 0.0067751 11008 20230619_1881_Aki_TMTPro18x_K_F2 67.997 50.196 334210 247160 335000 324390 371810 380920 382130 388130 364490 385760 388370 321360 399910 292450 376990 398940 343730 301300 308850 227000 340700 322050 383200 381090 384270 395820 373500 387920 397460 328520 406280 308380 382030 393710 328910 287370 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 186030000 31284 2910 29390 58827;58828 47479 47479 1734 1 9606 Homo sapiens 0.02636758299968278 YMPQNPHIIATK Unmodified 1411.7282 0.7282056 2910 E9PC52;Q6FHQ0;Q16576;Q16576-2;A8K6A2;Q5JP01 RBBP7 Histone-binding protein RBBP7 yes no 0 0 0 2 0 1 46.227 46.306 3 9.1226E-06 12758 20230619_1881_Aki_TMTPro18x_K_F2 136.27 111.06 353870 266160 327000 289090 300800 315360 311390 305000 431480 183880 183720 156540 185970 143900 246020 201470 180400 173940 326840 243990 333720 290650 314970 316790 316990 309130 422090 192010 200210 160010 192550 151950 245250 200150 173190 165520 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 227630000 31285 2910 29390 58829 47480 47480 1 9606 Homo sapiens 0.03881062162577109 YMQAVIQYGK Unmodified 1199.6009 0.60087982 3853 Q53GX4;Q2TA84;Q13451;B7Z8G2;B7Z7Z8;Q6ZR21 FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes no 0 0 0 3 0 1 56.506 56.542 2 0.0023927 17025 20230619_1882_Aki_TMTPro18x_K_F3 111.95 78.757 26789 20997 28065 25137 21021 26868 22688 26449 28564 27319 27883 25218 35729 23768 30231 26752 26668 33349 24775 19262 28278 25082 22474 27021 22991 27061 28748 27502 28963 25656 35900 24771 30623 27214 25596 31581 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13447000 31286 3853 29391 58830 47481 47481 1 9606 Homo sapiens 0.00906341288373369 YMQQNIR Unmodified 951.45964 0.45963531 704 C9J126;A0A024RC42;P19022-2;P19022;A0A6Q8PHJ8;C9JMH2;A0A6Q8PF58 CDH2 Cadherin-2 yes no 0 0 0 8 0 1 37.251 37.236 2 0.036784 8384 20230619_1888_Aki_TMTPro18x_K_F8 92.191 60.901 43782 28172 34854 39040 49697 51604 43064 40422 60138 34703 39566 36174 38894 33533 40993 32355 43378 34085 40361 25906 36391 38674 50299 50969 44301 41922 59401 35493 41516 36577 39831 34616 41726 32666 41416 32389 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18425000 31287 704 29392 58831 47482 47482 1 9606 Homo sapiens -0.01803612294213508 YMSPEQISSQDYGK Oxidation (M) 1647.7087 0.70865195 1711 A0A7P0TAL9;A0A7P0TBA9;B7ZKK7;P19525-2;P19525;Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes no 0 1 0 4.5 0.5 1 1 47.214 47.273 3 2.415E-05 12615 20230619_1885_Aki_TMTPro18x_K_F5 107.99 66.612 43236 36600 44927 50308 46652 45543 45114 43490 45806 68099 64791 67571 74544 63486 50355 72252 76072 78029 40001 33614 45543 49601 48221 46386 45630 45247 47502 67453 65999 68456 74635 66102 53169 72723 72550 74044 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93052000 31288 1711 29393 58832;58833 47483 47483 1113 1 9606 Homo sapiens -0.08929403429510785 YMSPEQISSQDYGK Unmodified 1631.7137 0.71373732 1711 A0A7P0TAL9;A0A7P0TBA9;B7ZKK7;P19525-2;P19525;Q8IW76 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes no 0 0 0 5.5 0.5 1 1 51.608 51.684 3 0.0014503 14625 20230619_1886_Aki_TMTPro18x_K_F6 73.266 61.121 205410 212250 223460 224260 276580 259760 253220 245860 226070 259660 272470 206200 251510 188460 278230 219050 201630 170410 190390 194300 226240 226070 281920 259880 255920 252470 233910 259960 276120 211330 258300 196700 277890 217160 193440 162490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138590000 31289 1711 29393 58834;58835 47484 47484 1 9606 Homo sapiens -0.07685099566879217 YMTDGMLLR Oxidation (M) 1114.5151 0.51510128 3246;3272;2093 O43143;B4E0S6;B4DFD7;Q5SQH4;O60231;A0A1U9X7L7;A0A1U9X7L6;B4DZ28;A0A140T947;K7END7;F5H658;B7Z8F4;Q86YB2;Q86X36;A8K6J9;Q14562 DHX15;DBP2;DHX16;DHX8 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15;Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16;ATP-dependent RNA helicase DHX8 no no 0 1 0 6.5 0.5 1 1 48.861 48.943 2 0.0024019 13078 20230619_1887_Aki_TMTPro18x_K_F7 99.755 88.115 146500 128670 136370 140880 164220 163540 168020 134070 160180 165170 151980 143180 159550 131430 176210 164780 170190 148490 135450 117890 139810 141600 168300 163090 168870 139930 163420 164630 156680 145970 163360 137750 178480 164200 162740 141280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 135900000 31290 3246;3272;2093 29394 58836;58837 47485 47485 1321 1 9606 Homo sapiens -0.0375756688877118 YMTISDEWDIPEK Oxidation (M) 1641.7232 0.72323938 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q86UM1;C9JZG1 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 1 0 3.5 0.5 1 1 60.008 60.037 3 0.00047341 18328 20230619_1883_Aki_TMTPro18x_K_F4 98.407 84.744 32311 26686 30577 33423 30302 30531 34345 35299 29331 38640 36910 39916 38778 33683 38035 41557 39127 39385 29866 24486 31215 33168 31566 31211 34259 35823 30515 38877 37627 40243 39484 35359 38769 41506 37428 37430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13323000 31291 487 29395 58838;58839 47486;47487 47487 301 2 9606 Homo sapiens -0.07195331281377548 YMVENHGEDYK Unmodified 1383.5765 0.57651556 4722 Q9Y3C1;D6RIC3;A0A0C4DGU5;Q9Y3C1-3;Q9Y3C1-2;Q9P0T8 NOP16 Nucleolar protein 16 yes no 0 0 0 3.5 0.5 1 1 41.324 41.375 3 5.7757E-08 10209 20230619_1882_Aki_TMTPro18x_K_F3 169.57 132.43 98632 74508 96565 97907 98864 123970 108700 96814 119740 132050 143980 140980 144850 118820 120170 157470 164920 152290 91143 68425 98330 97265 102900 122710 109380 101750 122380 131840 146570 142010 146640 125340 125300 157220 157270 144750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 187160000 31292 4722 29396 58840;58841 47488 47488 1 9606 Homo sapiens -0.0999296365578175 YNACILEYK Unmodified 1172.5536 0.55359527 1710 Q16531;A0A7P0TAK7;A0A7P0Z4B9;A0A7P0T965;A0A7P0Z3Z5;A0A7P0T870;F5GY55;B7Z2A1;B4DSA8;F5GWI0;F5H2L3;A0A7P0Z4L2;F5GZY8 DDB1 DNA damage-binding protein 1 yes no 0 0 0 8 0 1 54.702 54.769 2 1.2058E-06 15607 20230619_1888_Aki_TMTPro18x_K_F8 140.83 98.014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31293 1710 29397 58842 47489 47489 1 9606 Homo sapiens -0.025779379826190052 YNADEAR Unmodified 837.3617 0.3616954 3595 P47813;A6NJH9;O14602;X6RAC9;A0A1I9KF45 EIF1AX;EIF1AY Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A, Y-chromosomal yes no 0 0 0 1 0 1 30.163 30.163 2 0.022869 6051 20230619_1880_Aki_TMTPro18x_K_F1 101.33 61.785 33653 18574 45470 43563 74544 60674 49591 66786 35635 32716 61668 69021 40967 48027 59559 24448 69462 57810 31145 17226 45600 42134 74215 60188 51099 66843 38098 35939 61232 67665 43439 48945 60579 26939 66284 54597 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19819000 31294 3595 29398 58843 47490 47490 1 9606 Homo sapiens -0.06349097618567612 YNADYDLSAR Unmodified 1186.5255 0.52546627 3854 Q13505-3;Q13505 MTX1 Metaxin-1 yes no 0 0 0 3.5 0.5 1 1 43.855 43.912 2 0.00012156 11251 20230619_1883_Aki_TMTPro18x_K_F4 141.91 121.91 82273 56434 76105 85622 79865 91703 88760 82483 91726 166050 179440 196970 206890 164600 128990 203510 211770 234490 75952 51933 77944 84100 82928 92037 89134 87159 97068 164140 181180 197390 206530 173000 137520 205370 201980 222310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 170100000 31295 3854 29399 58844;58845 47491 47491 1 9606 Homo sapiens -0.06033544638330568 YNAQCQETIR Unmodified 1281.5772 0.57718426 2934 E9PPJ5;E9PLM6;P21741;P21741-2 MDK Midkine yes no 0 0 0 3.5 0.5 1 1 36.019 36.07 2 1.2296E-06 7937 20230619_1883_Aki_TMTPro18x_K_F4 176.33 149.65 167970 184470 229810 205120 112170 74520 62187 58440 91159 521290 437820 510340 475880 360650 228370 510300 507180 438070 156130 168920 226160 203880 124020 85332 67163 73365 106940 500850 434570 512750 472510 384950 253500 505500 482090 417100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 366700000 31296 2934 29400 58846;58847 47492;47493;47494 47494 3 9606 Homo sapiens -0.05234124216076452 YNASSVTPESLR Unmodified 1322.6466 0.64664404 1778 Q04656-3;Q04656-2;A0A8J9FM07;A0A8I5KXV0;Q04656-5;Q04656;A0A8I5KWA8;A0A8I5KU46;A0A8I5KST1;A0A8I5KVT9;A0A8I5QJP0;Q59HD1;A0A8I5KVB6;A0A8I5KWH1;A0A8I5KR00;A0A8I5KY05;A0A8I5KQ62;A0A8I5KPN6 ATP7A Copper-transporting ATPase 1 yes no 0 0 0 6 0 1 44.509 44.598 2 0.0027718 11525 20230619_1886_Aki_TMTPro18x_K_F6 98.156 52.438 25859 19149 24734 25061 30038 31940 24761 22262 30208 27864 32527 35912 30525 30560 43543 31956 37618 39839 23889 17587 25295 24903 30642 31557 25445 23576 30556 28122 33228 35897 31862 31760 43657 32570 36065 37747 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19790000 31297 1778 29401 58848 47495 47495 1 9606 Homo sapiens -0.0017734199568621989 YNCTLCSR Unmodified 1072.443 0.44299897 2676 Q6DKI9;Q9BSR4;Q4QRK8;B7Z1W6;Q9H9Y6-4;Q9H9Y6-5;Q9H9Y6-2;Q9H9Y6;Q9H9Y6-3 POLR1B DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA2 yes no 0 0 0 8 0 1 36.553 36.54 2 0.00649 8091 20230619_1888_Aki_TMTPro18x_K_F8 110.41 78.053 39791 28679 31767 35375 46966 53249 46230 43704 70565 25290 21911 24084 23277 18168 29404 24345 27436 21385 36705 26326 33196 35398 47639 52256 47339 44811 68433 26610 24856 24309 24020 19267 29652 24219 26227 20365 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7677300 31298 2676 29402 58849 47496 47496 1 9606 Homo sapiens -0.09032481242479662 YNDPIYVK Unmodified 1010.5073 0.50729701 1172;3819 P63010-2;P63010;P63010-3;A0A140VJE8;A8K916;H0UID3;H0UID4;H0UID5;A8K0G3;A0A087X253;B4DWG4;B4E261;A0A087WZQ6;A0A087WU93;A0A087WYD1;Q10567-4;Q10567-3;Q10567-2;Q10567;C9J1E7 AP2B1;AP1B1 AP-2 complex subunit beta;AP complex subunit beta;AP-1 complex subunit beta-1 no no 0 0 0 6.5 0.5 1 1 49.794 49.875 2 0.0014126 13502 20230619_1887_Aki_TMTPro18x_K_F7 156.75 111.12 292120 219140 243760 277410 236420 275390 296560 286160 326290 349540 337670 327020 381820 305670 303860 428840 389960 366350 269600 201180 251770 275330 248000 278850 296440 293320 331360 349140 347710 332490 384540 322550 315800 425080 372110 348710 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 308830000 31299 1172;3819 29403 58850;58851 47497;47498 47498 2 9606 Homo sapiens 0.0024636517762246513 YNDTFWK Unmodified 972.43413 0.43413207 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;B4DU71;B4DHT9;Q58FF3 HSP90B1;HEL-S-125m;TRA1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein yes no 0 0 0 7.5 0.5 1 1 54.621 54.686 3 0.013439 15537 20230619_1888_Aki_TMTPro18x_K_F8 83.206 57.469 195940 160700 186120 192620 169310 243970 217000 236860 286990 271810 251730 333220 338760 315600 234690 363950 369450 385490 181110 147400 189770 192610 179060 242490 218210 243310 287100 274770 264180 334720 338400 328560 248620 365770 352300 365860 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 287900000 31300 3452 29404 58852;58853 47499;47500 47500 2 9606 Homo sapiens -0.053187635450058224 YNEIQNDYLR Unmodified 1326.6204 0.62042929 804 Q9NQ66;A0A0D9SF51;Q9NQ66-2;A0A087WT80;A0A087WW73;A0A1B0GWB6;A0A0D9SG17;B3KXN8;B4DRC6;H0YCJ2;A0A0D9SGI7;A0A1B0GW62 PLCB1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1;Phosphoinositide phospholipase C yes no 0 0 0 4 0 1 49.024 49.061 2 0.00042541 13558 20230619_1883_Aki_TMTPro18x_K_F4 126.29 91.512 48192 39215 49312 57556 47960 58389 50349 53402 65728 59349 62320 65102 77635 63075 58069 68209 67097 79784 44569 36048 50032 56595 50053 58835 51122 55068 65956 59864 64768 65761 77801 65436 59949 69079 64198 75610 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100890000 31301 804 29405 58854 47501 47501 1 9606 Homo sapiens -0.02981611167160736 YNELSYK Unmodified 915.4338 0.43379771 1127 B3KM48;A0A0S2Z5H7;D6RAX7;Q9BT78;Q53FV3;D6RFN0;Q9BT78-2;D6RD63 COPS4 COP9 signalosome complex subunit 4 yes no 0 0 0 7 0 1 46.698 46.786 2 0.0030061 12091 20230619_1887_Aki_TMTPro18x_K_F7 127.56 76.599 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31302 1127 29406 58855 47502 47502 1 9606 Homo sapiens -0.027301832648504387 YNEQHVPGSPFTAR Unmodified 1601.7587 0.7586541 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;Q8TES4;Q6NXF2;Q96C61 FLNA;FLJ00119 Filamin-A yes no 0 0 0 7.5 0.5 1 1 41.575 41.609 3 8.2322E-09 9909 20230619_1887_Aki_TMTPro18x_K_F7 120.54 78.447 218740 153960 216640 241510 268100 325940 252170 258160 306640 296100 300530 348670 298670 262850 318680 281010 337840 340510 202070 141720 221200 237590 274300 321420 256880 269400 309140 298850 308950 348350 305920 274950 324540 285570 323080 322780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1021699999.9999999 31303 3484 29407 58856;58857 47503;47504 47503 2 9606 Homo sapiens -0.01815487918679537 YNFFTGCPK Unmodified 1132.5012 0.50116577 4005 Q53HV2;Q99832;Q6IBT3;Q99832-3;B7Z7I4;Q99832-4;B7Z1C9;Q99832-2 CCT7 T-complex protein 1 subunit eta yes no 0 0 0 3.5 0.5 1 1 55.887 55.912 2 7.3707E-06 16553 20230619_1883_Aki_TMTPro18x_K_F4 204.91 177.03 435980 365650 375210 409880 370820 422040 422690 404810 440210 478380 416020 411470 528720 413580 399580 585560 485600 482110 402730 335130 386360 410560 387120 425560 423750 416770 446990 477480 432810 421080 529750 435730 414370 579310 463770 459020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1071999999.9999999 31304 4005 29408 58858;58859 47505;47506 47506 2 9606 Homo sapiens -0.05978476325572046 YNFHGTAEQDLPFCK Unmodified 1825.8094 0.80936904 2025 B5BU52;B2R6Q4;A8K3B6;P41240;B4DP99;Q53EL3;H3BUM9;H3BN15 CSK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase CSK yes no 0 0 0 7 0 1 52.483 52.554 3 0.0050828 14721 20230619_1887_Aki_TMTPro18x_K_F7 65.038 57.98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31305 2025 29409 58860 47507 47507 1 9606 Homo sapiens -0.07050326655985373 YNFPVEVEVPMER Oxidation (M) 1623.7603 0.76029359 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 1 0 4.67 0.471 1 2 58.311 58.34 2;3 3.5985E-06 17552 20230619_1883_Aki_TMTPro18x_K_F4 127.36 118.95 42481 36373 39606 49853 41669 51735 49167 46694 65177 46458 50243 52551 50110 47431 59622 55326 51917 55903 39270 33403 40577 49234 43397 52031 49610 48068 64829 47199 52286 52908 51632 49487 60014 55522 49776 53076 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109180000 31306 3758 29410 58861;58862;58863 47508;47509 47508 2449 2 9606 Homo sapiens -0.02663614944958681 YNFPVEVEVPMER Unmodified 1607.7654 0.76537896 3758 P78527;P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 4 0 1 61.506 61.51 2 0.0014858 18941 20230619_1883_Aki_TMTPro18x_K_F4 122.55 108.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31307 3758 29410 58864 47510 47510 1 9606 Homo sapiens -0.014193110823271127 YNGEPEHIER Unmodified 1242.5629 0.56291441 260 A0A024R3R5;Q14739;A0A494C1L1;C9JXK0 LBR Lamin-B receptor yes no 0 0 0 1.5 0.5 1 1 32.725 32.725 3 4.7893E-11 6818 20230619_1881_Aki_TMTPro18x_K_F2 163.9 138.46 30012 26627 35886 28137 34787 34211 31250 32281 38504 37857 45801 43539 44910 35811 34242 43359 47671 40097 27811 24387 35891 28402 36088 34115 31968 33254 39103 38134 46576 43695 45347 37594 35795 43245 45429 38146 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71957000 31308 260 29411 58865;58866 47511;47512 47512 2 9606 Homo sapiens -0.04866453372710566 YNHAACFGLQPGCLLPDGSR Unmodified 2232.0204 0.020441226 2141 A8K9T8;Q9BYT8;E9PCB6;Q9BQD0;H0YAK4;Q96K48;Q8NDD9;H0YAF7 NLN;DKFZp564F123 Neurolysin, mitochondrial yes no 0 0 0 2 0 1 54.477 54.501 3 1.6139E-16 16396 20230619_1881_Aki_TMTPro18x_K_F2 163.79 156.07 108890 81264 131890 104050 101060 124950 125930 119830 136170 193820 139960 180080 166070 143590 135000 201380 151980 185250 100800 74613 131450 103550 108120 124620 125910 124710 138660 191380 144820 181990 167220 152360 139150 200330 145480 176000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 569420000 31309 2141 29412 58867 47513 47513 1 9606 Homo sapiens -0.04628817676393737 YNHIDESEMK Oxidation (M) 1280.5343 0.53431639 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72;Q5TBM3 HSPH1 Heat shock protein 105 kDa yes no 0 1 0 2.5 0.5 1 1 36.157 36.213 3 0.00022221 8157 20230619_1881_Aki_TMTPro18x_K_F2 113.61 86.28 77434 18291 67921 85563 85287 67054 84977 85202 105530 102110 113350 107840 119950 88225 69073 122040 94477 102340 71210 17407 70123 80492 87041 69562 86329 86267 106660 102450 116100 108610 119700 93467 72836 120840 90203 97386 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 99048000 31310 769 29413 58868;58869 47514;47515 47515 467 2 9606 Homo sapiens -0.09472939064175989 YNHIDESEMK Unmodified 1264.5394 0.53940177 769 A0A024RDQ0;A0A024RDS1;Q92598-2;Q92598;Q92598-3;Q92598-4;B4DF68;A0A0A0MSM0;B4DY72;Q5TBM3 HSPH1 Heat shock protein 105 kDa yes no 0 0 0 2.5 0.5 1 1 40.569 40.635 3 0.0020734 9893 20230619_1882_Aki_TMTPro18x_K_F3 84.882 75.45 75337 47004 76166 82956 76574 76279 80197 82976 103150 99490 112520 108530 116780 98832 91953 123190 110190 104630 69565 43362 77336 80687 79569 77768 81391 84758 104140 99946 115120 109490 117880 103520 95120 122290 105210 99593 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159120000 31311 769 29413 58870;58871 47516 47516 1 9606 Homo sapiens -0.08228635201544421 YNHSHDQLVLTGSSDSR Unmodified 1914.882 0.88201671 2165 A8MUM1;Q53HC9;C9JVR6 TSSC1 Protein TSSC1 yes no 0 0 0 4.5 0.5 1 1 34.722 34.791 4 5.6285E-10 7463 20230619_1885_Aki_TMTPro18x_K_F5 143.67 133.75 27712 17038 24164 28768 32264 27166 27164 25338 36952 33708 32023 38826 35978 31013 28727 32682 43401 37091 25557 15709 24977 28044 32695 27560 27979 26252 36909 33783 33297 38875 36271 32338 30166 33054 41341 35206 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 37226000 31312 2165 29414 58872;58873 47517;47518 47518 2 9606 Homo sapiens -0.0388290132889324 YNIELDPR Unmodified 1018.5084 0.50835964 1352 Q5U5J2;P68400;A0A2R8Y5A0;B2R6D7;E7EU96;Q2I0Y7;A0A2R8YD58;A0A2R8YFU2;A0A2R8YF43;A0A2R8YDP2;P68400-2;Q8NEV1;A0A087WY74 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 yes no 0 0 0 4 0 1 48.348 48.388 2 0.0041195 13193 20230619_1883_Aki_TMTPro18x_K_F4 117.39 35.604 134140 104890 121160 126200 114780 129230 126700 128930 140360 165160 160840 142030 169680 136480 130300 187730 167140 165950 123900 96231 124090 125770 120110 130460 127550 132690 143170 164230 164270 145160 171000 143710 135550 186430 159550 157850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193990000 31313 1352 29415 58874 47519 47519 1 9606 Homo sapiens -0.00015420453473780071 YNIEVVCEYIVK Unmodified 1527.7643 0.76431633 3571 P41091;Q2VIR3;Q2VIR3-2 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein yes no 0 0 0 7.5 0.5 1 1 62.545 62.581 3 9.4203E-05 18895 20230619_1888_Aki_TMTPro18x_K_F8 110.8 95.414 109970 92769 107010 115560 87583 107890 100900 115700 165010 110260 99464 112410 121640 106910 109610 130210 123140 126800 101690 85111 108710 114750 93093 109830 102970 117500 161730 111910 106180 113830 122950 111680 112530 130220 117720 120460 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363800000 31314 3571 29416 58875;58876 47520;47521 47521 2 9606 Homo sapiens 0.021544745487744876 YNILGTNTIMDK Oxidation (M) 1397.6861 0.68606601 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 1 0 4.5 3.5 1 1 55.021 55.055 2;3 3.7005E-05 16456 20230619_1880_Aki_TMTPro18x_K_F1 131.17 87.403 361020 301890 333340 393080 411860 395880 427610 400170 399130 400800 425610 416000 451970 374200 416820 493830 393480 419570 333660 277110 342420 389430 421430 400330 429310 408690 409420 405440 436600 420480 458630 393610 423630 489980 376890 399200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1975899999.9999998 31315 3776 29417 58877;58878 47522;47523 47522 2464 2 9606 Homo sapiens 0.0031304196352266445 YNILGTNTIMDK Unmodified 1381.6912 0.69115139 3776 Q00839;B3KX72;Q00839-2;B4DLR3;A0A1W2PPS1;A0A1X7SBS1;Q96BA7;A0A1W2PP35;A0A994J6V2;Q5RI18;A0A1W2PPH7;A0A1W2PPL4;Q7Z4Q5;A0A1W2PP34;A0A1W2PQL0;A0A1W2PQ74;A0A1W2PRZ7;A0A1W2PQD4 HNRNPU;HNRPU Heterogeneous nuclear ribonucleoprotein U yes no 0 0 0 3.67 3.09 1 1 1 59.937 59.953 3 1.6074E-05 18580 20230619_1881_Aki_TMTPro18x_K_F2 128.57 89.988 496690 411400 416880 486060 466900 522520 572480 519890 459750 608250 465480 477220 583590 512760 547870 657390 565000 586840 458700 377270 431390 485230 483690 525600 567470 533710 476050 605740 482810 491660 590300 535390 559300 654030 540570 558050 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3188299999.9999995 31316 3776 29417 58879;58880;58881 47524;47525;47526 47525 3 9606 Homo sapiens 0.015573458261542328 YNIMLVR Unmodified 907.49496 0.49495818 3621 Q53HU0;P50990;P50990-2;Q7Z759;P50990-3;H7C4C8 CCT8 T-complex protein 1 subunit theta yes no 0 0 0 3.5 0.5 1 1 52.299 52.343 2 0.013393 15058 20230619_1883_Aki_TMTPro18x_K_F4 114.02 63.903 1622600 1321300 1495100 1501900 1278100 1621400 1472500 1580500 1683800 1824500 1967000 2068600 2349500 1683100 1729800 2204700 2342600 2335300 1499300 1211300 1526200 1504100 1352200 1629400 1481200 1623800 1715600 1837700 2021500 2076000 2354600 1778000 1806200 2212900 2235400 2216800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1093900000 31317 3621 29418 58882;58883 47527;47528 47528 2 9606 Homo sapiens 0.037510502335976526 YNIPHGPVVGSTR Unmodified 1395.7259 0.72589741 3617 P50402;A0A804HIV7;A0A804HLA2 EMD Emerin yes no 0 0 0 2.5 0.5 1 1 41.335 41.403 3 3.3716E-06 10429 20230619_1881_Aki_TMTPro18x_K_F2 132.59 105.26 308830 239540 283280 322350 323960 345430 345220 351140 385240 369790 372030 373040 383630 316790 375250 389810 382260 374130 285280 220020 290740 318970 333830 347650 348090 358810 389730 372800 382900 376670 390700 332520 382190 389660 365620 355550 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 309550000 31318 3617 29419 58884;58885 47529;47530;47531 47529 3 9606 Homo sapiens 0.043863497491202 YNIWCSTEHGNK Unmodified 1507.6514 0.65141184 2661 B5BU99;Q9Y5A9;Q9Y5A9-2 YTHDF2 YTH domain-containing family protein 2 yes no 0 0 0 8 0 1 45.698 45.737 3 5.6535E-10 11783 20230619_1888_Aki_TMTPro18x_K_F8 182.89 167.86 88228 70210 80282 88133 76971 93893 85620 90686 73911 109140 91504 102690 104080 89195 71905 108420 112730 121350 81507 64434 82218 87604 80493 94413 85530 93342 76865 109030 93656 104020 104340 93503 76140 109250 107530 115090 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33349000 31319 2661 29420 58886 47532 47532 1 9606 Homo sapiens -0.08210781124580535 YNKPAFLK Unmodified 979.5491 0.54910224 562 A0A8V8TNE2;A0A024R9A9;Q9NPD8;A0A8V8TN93;A0A8V8TQ15 UBE2T Ubiquitin-conjugating enzyme E2 T yes no 0 0 1 5 0 1 48.437 48.513 3 0.066878 13105 20230619_1885_Aki_TMTPro18x_K_F5 56.81 37.033 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31320 562 29421 58887 47533 47533 1 9606 Homo sapiens 0.05850965656804874 YNLDASEEEDSNK Unmodified 1512.6216 0.62161108 3347 O95218-2;O95218 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes no 0 0 0 1.5 0.5 1 1 44.942 44.942 3 1.7132E-08 12281 20230619_1880_Aki_TMTPro18x_K_F1 165.72 158.67 37735 29303 36051 42738 43801 46792 43185 48242 52057 51095 52043 53392 57142 45009 45741 63051 57482 47306 34869 26939 36918 42090 44869 47030 43864 49243 52548 51548 53616 53836 57603 47645 47453 62143 54814 45136 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71825000 31321 3347 29422 58888;58889 47534;47535 47534 2 9606 Homo sapiens -0.11419486379554655 YNLGLDLR Unmodified 962.51853 0.5185304 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;P00367-3;B3KT18;A0A804HKE0;P00367-2;P49448;A0A140VK14;Q14400;Q9BSD0;Q9UQV0 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 7 0 1 54.039 54.107 2 0.068185 15374 20230619_1887_Aki_TMTPro18x_K_F7 72.968 17.437 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31322 2542 29423 58890 47536 47536 1 9606 Homo sapiens 0.03577187271741877 YNLPESAPLIYNSFAQFLVK Unmodified 2313.2045 0.20452005 2018 A8K2Z3;Q5TFE4;Q5QPD0 NT5DC1 5'-nucleotidase domain-containing protein 1 yes no 0 0 0 5 0 1 66.797 66.839 3 0.0019684 20901 20230619_1885_Aki_TMTPro18x_K_F5 69.737 58.123 6762.1 3186.8 4783.3 5365.9 3135.6 4160.3 3524.6 5329.4 3992.7 6010.3 6497.4 5930.1 7946.2 4751.7 5059 5584.2 7160.4 6008.2 6221 2942.6 5001 5222.5 3409.9 4320.5 3556.7 5378.3 4149.4 6027.7 6603.9 5984.2 7912.7 4995 5313 5620.7 6822.7 5706.3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 7724600 31323 2018 29424 58891 47537 47537 1 9606 Homo sapiens 0.1004459729761038 YNLQEVVK Unmodified 991.53385 0.53384611 227 O60362;A0A024R388;Q6MZT3;Q9NXG2;B4DFY9 44M2.1;THUMPD1;DKFZp686C1054 THUMP domain-containing protein 1 yes no 0 0 0 7 0 1 51.25 51.328 3 0.0026747 14170 20230619_1887_Aki_TMTPro18x_K_F7 91.853 50.405 83375 64577 74700 73635 78589 96707 94944 95350 110130 86380 87362 90565 99969 88864 83561 107060 105890 100660 77002 59216 76682 73954 81873 95984 95226 97234 110360 87961 91272 91736 100910 92656 86618 106870 101060 95698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50305000 31324 227 29425 58892 47538 47538 1 9606 Homo sapiens 0.03774054068958321 YNNFQMHLDR Oxidation (M) 1352.5932 0.59316868 2096 B3KM89;A8K6V0;O94855;O94855-2;E9PDM8;Q49AI3;E9PC44 SEC24D Protein transport protein Sec24D yes no 0 1 0 7 0 1 38.153 38.217 3 0.0012789 8546 20230619_1887_Aki_TMTPro18x_K_F7 88.24 73.096 37179 30237 34004 39569 42112 50108 45419 47187 53319 33098 37948 32382 32095 27627 42157 31997 39648 37333 34353 27759 34972 39319 43233 49780 45831 48019 53181 34219 39387 32777 33429 28897 42495 32415 37943 35411 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29121000 31325 2096 29426 58893 47539 47539 1322 1 9606 Homo sapiens -0.06902417979176789 YNNFQMHLDR Unmodified 1336.5983 0.59825406 2096 B3KM89;A8K6V0;O94855;O94855-2;E9PDM8;Q49AI3;E9PC44 SEC24D Protein transport protein Sec24D yes no 0 0 0 7.5 0.5 1 1 44.111 44.162 3 5.2221E-05 11156 20230619_1888_Aki_TMTPro18x_K_F8 124.1 98.667 40663 27160 38187 39626 42591 49848 51668 47425 53206 30562 32112 28080 34095 29469 36869 31887 32083 27849 37538 24986 39086 39116 44152 49545 51584 48171 53199 31762 34019 28701 34873 30475 37148 31802 30714 26509 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51696000 31326 2096 29426 58894;58895 47540 47540 1 9606 Homo sapiens -0.05658114116567958 YNNPAMLHNIDQEMLK Oxidation (M) 1945.9026 0.9026175 4692 Q9UNS2;B4DN01;H7C3P9;Q9UNS2-2 COPS3 COP9 signalosome complex subunit 3 yes no 0 1 0 6 0 1 49.986 50.063 3 0.020639 13937 20230619_1886_Aki_TMTPro18x_K_F6 48.177 30.26 19348 15030 20474 18559 17871 19742 17200 17269 20818 21084 21643 23838 25474 23180 24342 23265 20858 27394 17894 13793 20650 18474 18754 19820 17509 17919 21048 21194 22353 24043 25826 23936 24577 23615 20036 25951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25564000 31327 4692 29427 58896 47541 47541 2860 1 9606 Homo sapiens -0.03249770265074403 YNNQLATR Unmodified 978.48829 0.4882929 1811 B4DYQ7;A0A8V8TKU8;A0A8V8TKT8;A0A8V8TLW9;A0A8V8TKG0;A0A8V8TKI2;A0A8V8TLW4;L7RXH0;A5YM53;P06756-3;P06756-2;P06756;A0A8V8TKF7;A0A8V8TLN8 ITGAV Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain yes no 0 0 0 7 0 1 34.818 34.894 2 0.010019 7267 20230619_1887_Aki_TMTPro18x_K_F7 100.02 80.54 19018 12025 22538 16955 21629 22264 24399 23055 26303 17452 20295 26096 19539 18239 27664 10605 26139 23308 17588 11061 22554 16799 22587 22125 24498 23350 26416 18208 21133 25790 20365 18676 27805 11549 25005 22014 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10939000 31328 1811 29428 58897 47542 47542 1 9606 Homo sapiens -0.001811713934330328 YNPENLATLER Unmodified 1318.6517 0.65172941 3173 K7ERF1;Q9UBQ5;K7ES31;Q9UBQ5-2;B4DVD7 EIF3K Eukaryotic translation initiation factor 3 subunit K yes no 0 0 0 4.5 0.5 1 1 50.745 50.799 2 1.7385E-08 14314 20230619_1883_Aki_TMTPro18x_K_F4 175.49 149.87 306400 244950 299870 337700 304680 380230 354110 342020 401340 418400 412610 428040 478640 387330 407790 502080 478130 482530 283230 225020 305550 333830 317800 380200 355630 354130 406850 419070 425780 432790 482960 407020 420310 501320 456820 458500 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 493370000 31329 3173 29429 58898;58899 47543;47544 47543 2 9606 Homo sapiens 0.005149618669292977 YNPNVLPVQCTGK Unmodified 1488.7395 0.73949856 1923 Q6LEU2;A3KLL5;P05026-2;P05026;A0A8I5KNT2;B7Z9S8;A6NGH2;Q58I20;A0A8I5KX89 ATP1B1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 0 2 0 1 51.124 51.169 3 1.8541E-07 14957 20230619_1881_Aki_TMTPro18x_K_F2 145.31 118.28 148620 130920 119920 194250 179480 241980 222930 204180 249050 202550 207620 193790 220590 176680 191620 241200 206200 234970 137270 120330 125680 191350 183290 239990 222840 211190 250440 204660 215430 196710 223300 186290 196460 240830 197350 223140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 528700000 31330 1923 29430 58900 47545 47545 1 9606 Homo sapiens 0.014678394660222693 YNPPDHEVVAMAR Oxidation (M) 1513.6984 0.69836203 517;3288 O60885;A0A024R7H8;O60885-2;O60885-3;Q6PIS5;Q6NXE4;Q05BM2;Q5BJ26;M0QZD9;A0A024R8H6;Q15059;A0A140F1N4;Q15059-2;B4DS09 BRD4;BRD3 Bromodomain-containing protein 4;Bromodomain-containing protein 3 no no 0 1 0 3.5 0.5 1 1 36.793 36.844 3 0.00028862 8216 20230619_1883_Aki_TMTPro18x_K_F4 93.649 81.266 24861 21688 23860 29205 32331 27644 25963 30249 36892 25795 34112 29188 31754 32047 29663 28631 33587 32652 22990 19912 24466 28848 32701 28149 26894 30599 36812 26438 34987 29602 32421 32764 30410 29061 32092 30974 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 53712000 31331 3288;517 29431 58901;58902 47546 47546 308 1 9606 Homo sapiens -0.03793921573424086 YNPPDHEVVAMAR Unmodified 1497.7034 0.70344741 517;3288 O60885;A0A024R7H8;O60885-2;O60885-3;Q6PIS5;Q6NXE4;Q05BM2;Q5BJ26;M0QZD9;A0A024R8H6;Q15059;A0A140F1N4;Q15059-2;B4DS09 BRD4;BRD3 Bromodomain-containing protein 4;Bromodomain-containing protein 3 no no 0 0 0 4 0 1 41.53 41.573 3 1.2323E-18 10223 20230619_1883_Aki_TMTPro18x_K_F4 177.42 162.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31332 3288;517 29431 58903 47547 47547 1 9606 Homo sapiens -0.025496177107925178 YNPTWHCIVGR Unmodified 1401.6612 0.66118866 3739;4348 Q6FGH9;P63167;Q96FJ2 DNCL1;DYNLL1;DYNLL2 Dynein light chain 1, cytoplasmic;Dynein light chain 2, cytoplasmic no no 0 0 0 3.5 0.5 1 1 45.886 45.946 3 2.4937E-06 12101 20230619_1883_Aki_TMTPro18x_K_F4 150.09 133.42 388460 313150 388580 387820 407870 464290 426470 441680 469220 404380 399140 389310 442520 389700 435690 490260 476590 487240 359160 287340 395030 386580 422740 463100 430330 451680 472770 410380 414760 396220 450130 407280 445720 490710 455680 462780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1247200000 31333 3739;4348 29432 58904;58905 47548;47549 47549 2 9606 Homo sapiens -0.023575483285640075 YNPYTTRPNR Unmodified 1280.6262 0.62618337 4657 Q9UBU9;E9PIN3;Q59E96;Q9UBU9-2;E9PLA7;E9PMV7 NXF1 Nuclear RNA export factor 1 yes no 0 0 1 4.5 0.5 1 1 33.254 33.323 3 0.00012485 6884 20230619_1885_Aki_TMTPro18x_K_F5 130.41 87.386 83676 70655 73894 86768 96700 113870 100580 102680 109820 99232 118770 109740 115850 93304 98697 134160 131540 117230 77314 64814 76319 86636 98821 112800 101460 105550 111660 100810 121230 110500 117510 98935 102670 133110 125440 111570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 122810000 31334 4657 29433 58906;58907 47550;47551 47551 2 9606 Homo sapiens -0.002904678648292247 YNQATPNFHQWR Unmodified 1560.7222 0.72220902 111 A0A994J7X3;A0A0S2Z4I9;A0A0S2Z4N8;A0A024R0V4;P50552;A0A0S2Z4I7 VASP Vasodilator-stimulated phosphoprotein yes no 0 0 0 3 0 1 43.095 43.161 3 0.028589 11009 20230619_1882_Aki_TMTPro18x_K_F3 53.388 39.23 71769 45203 77744 84228 109310 124730 98684 117270 120080 91918 122970 136710 121800 121710 96451 79626 161790 144280 66313 41732 79005 82308 110800 122770 100810 119570 121120 95662 126040 136140 123330 123810 102010 84387 154050 136420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50986000 31335 111 29434 58908 47552 47552 1 9606 Homo sapiens -0.03572320024750297 YNQATQTFHQWR Unmodified 1578.7328 0.7327737 918 A8K2B4;A0A4D6J698;A0A097PID1;A0A097PIC4;A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7;A0A075B6E5;A0A0U1RQP7 ENAH Protein enabled homolog yes no 0 0 0 2.5 0.5 1 1 42.626 42.698 3 4.443E-13 10793 20230619_1882_Aki_TMTPro18x_K_F3 196.02 165.63 74713 73693 86013 68317 75838 76228 81848 79005 80093 65349 72307 84994 82601 63003 87919 95312 96905 83389 69260 67400 86161 69650 79626 76619 82164 80172 81352 67370 75132 84678 84202 67415 89839 94571 92538 79379 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265130000 31336 918 29435 58909;58910 47553 47553 1 9606 Homo sapiens -0.03344337370322137 YNQMDSTEDAQEEFGWK Unmodified 2076.8371 0.83709994 9 B3KSG9;A0A024QYR8;Q99805 TM9SF2 Transmembrane 9 superfamily member 2 yes no 0 0 0 3 0.816 1 1 1 58.696 58.711 3 5.9374E-14 17908 20230619_1882_Aki_TMTPro18x_K_F3 164.53 160.08 53159 43100 48567 52674 49896 49731 63837 57893 63434 75391 66509 63193 77115 55447 67993 76522 70778 78387 49117 39541 49766 52385 52044 50722 63529 59054 64847 74850 68542 64449 77862 58634 69503 76631 67746 74404 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 84924000 31337 9 29436 58911;58912;58913 47554;47555 47555 2 9606 Homo sapiens -0.15824512977042104 YNRDFESHITSYK Unmodified 1658.7689 0.76888444 12 B4DVQ5;A1KYQ7;A0A024QYU9;Q99613-2;Q99613;B5ME19;B4E2Z6;Q3B7B9;H3BPE3 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein yes no 0 0 1 8 0 1 43.813 43.823 4 0.0021433 11032 20230619_1888_Aki_TMTPro18x_K_F8 86.944 59.915 52096 50305 54196 55753 57547 59518 63822 63444 63990 76446 80617 75118 67736 57645 67063 81671 75178 77115 48242 46080 54939 55935 59623 60019 64012 64882 65882 76475 81333 75751 69508 61304 68740 81384 71865 73286 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 68370000 31338 12 29437 58914 47556 47556 1 9606 Homo sapiens -0.034149249840993434 YNSEVVDK Unmodified 952.45018 0.45017606 3269 O43847;O43847-2;B4DRI0;Q6UUU9;G3V1R5 NRD1 Nardilysin yes no 0 0 0 3 0 1 42.271 42.333 2 0.050052 10623 20230619_1882_Aki_TMTPro18x_K_F3 77.192 38.954 31605 17220 34900 37123 46855 58556 34218 46553 55951 41344 54189 60775 57950 52017 44336 40901 65415 63086 29188 15948 35373 36085 47477 57245 35940 48204 55654 42691 55862 60481 58414 53367 46461 42541 62369 59693 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8845800 31339 3269 29438 58915 47557 47557 1 9606 Homo sapiens -0.02795102098764346 YNSQLLSFVR Unmodified 1225.6455 0.64552182 1817 A8K6Q8;A0A8V8TLM6;P02786;A0A8V8TM41;G3V0E5;A0A8V8TLN0;A0A8V8TM46;A0A8V8TN37;B7Z2I6 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form yes no 0 0 0 4.5 0.5 1 1 58.512 58.541 2 2.2595E-09 17736 20230619_1883_Aki_TMTPro18x_K_F4 199.81 178.53 347040 316180 293570 250310 338870 567460 259210 253970 488430 95729 72412 65949 71058 61016 110550 87072 82203 62913 320720 288940 303230 262450 348500 542270 272810 276750 466860 105510 93781 68297 74653 64469 110020 85815 78792 60082 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190460000 31340 1817 29439 58916;58917 47558 47558 1 9606 Homo sapiens 0.04172488426070231 YNSSSISSVLK Unmodified 1183.6085 0.60846762 1885 A0A994J7P9;P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 yes no 0 0 0 2 0 1 52.283 52.321 3 0.0025087 15495 20230619_1881_Aki_TMTPro18x_K_F2 76.165 59.911 28456 26784 30058 28778 30869 30022 31000 27203 42348 33418 32247 34843 38006 34238 37119 42740 39400 39381 26349 24530 30398 28931 31985 30225 31590 28168 42085 33516 33836 35293 38586 35773 37918 42611 37676 37440 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8565500 31341 1885 29440 58918 47559 47559 1 9606 Homo sapiens 0.024007720896634055 YNTDCVQGLTHSK Unmodified 1521.6882 0.68819127 959 M0R116;A0A0A0MT26;A0A2R8YEY8;Q53ES0;B7Z9V4;P13637;P13637-2;P13637-3;B7Z1Q9;B7Z3F8;M0QXF2 ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 7 0 1 42.686 42.761 3 1.3438999999999999E-21 10396 20230619_1887_Aki_TMTPro18x_K_F7 232.78 209.4 114790 94462 115640 106430 44165 36203 92003 89713 79505 114480 109420 100600 130510 90836 91071 149510 137940 126760 106150 86590 116240 105720 52656 43263 89740 88699 83020 113810 111690 102540 130560 97201 96206 147830 131450 120680 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51206000 31342 959 29441 58919 47560 47560 1 9606 Homo sapiens -0.051785292986778586 YNTEEFITVYPTDPPK Unmodified 1912.9095 0.90946024 4328 Q96BN8;H0Y9T0 OTULIN Ubiquitin thioesterase otulin yes no 0 0 0 4.5 0.5 1 1 60.586 60.612 3 0.00091541 18139 20230619_1885_Aki_TMTPro18x_K_F5 72.446 61.979 65354 49616 59584 63031 68296 76030 67693 65114 80603 52981 50590 42765 55179 40154 67956 58925 56167 48681 60360 45548 61158 62712 70271 75636 68665 66955 80124 53950 53505 43854 56737 42526 68173 58370 53802 46374 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21693000 31343 4328 29442 58920;58921 47561 47561 1 9606 Homo sapiens -0.010478108412144138 YNYTSEEK Unmodified 1032.44 0.4400053 4154 Q7L576;X5D2F4;A0A087WVZ5;B3KWV6;A0A0G2JQT1;A0A0G2JR96;E7EVJ5;Q96F07;Q96F07-2;H7C229;B7Z8N7;A0A8V8TNU3;B7Z3H2;B7Z4I3;B7Z217;E7EW33;Q9NSN1 CYFIP1;CYFIP2;DKFZp761H087 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 3 0 1 40.832 40.891 2 0.001198 9987 20230619_1882_Aki_TMTPro18x_K_F3 146.79 95.726 37469 22682 47788 51312 58274 63825 52007 59575 47552 47947 76086 87275 70959 65166 70288 31496 94907 81224 34669 21012 47865 49570 59478 63432 52721 60841 49801 50247 76584 85959 72589 66195 72612 35112 90474 76670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45753000 31344 4154 29443 58922 47562 47562 1 9606 Homo sapiens -0.07491709823989368 YPALIGNLVK Unmodified 1086.6437 0.64373091 3107 I3L2X1;Q9BYC9;Q9BYC9-2 MRPL20 39S ribosomal protein L20, mitochondrial yes no 0 0 0 4.5 0.5 1 1 61.982 62.008 3 0.0007785 19098 20230619_1883_Aki_TMTPro18x_K_F4 95.502 63.181 62595 54300 60773 62790 61827 79031 71812 71397 78327 56426 45482 47637 56650 44444 64965 51610 48083 42626 57888 49777 61934 62936 64492 78482 72010 73055 78087 57606 48755 48644 57828 46342 64905 51300 46131 40602 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 212090000 31345 3107 29444 58923;58924 47563 47563 1 9606 Homo sapiens 0.10387479408132094 YPASTVQILGAEK Unmodified 1375.7347 0.73473076 2138 A8K9K6;O00567;A0PJ92;A0A494C128;H0YDU4;H0Y653 NOP56 Nucleolar protein 56 yes no 0 0 0 7.5 0.5 1 1 55.8 55.862 3 9.9258E-05 16071 20230619_1888_Aki_TMTPro18x_K_F8 101.53 73.249 131290 110420 125780 120640 122820 133290 135880 129020 144380 140280 151130 138440 138130 116690 147940 152990 144570 144970 121380 101180 128150 121230 128140 133780 136540 132410 146850 141110 154130 139960 141840 123000 150110 152700 138360 137780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 358350000 31346 2138 29445 58925;58926 47564 47564 1 9606 Homo sapiens 0.06189278594956704 YPDANPNPNEQ Unmodified 1257.5262 0.52619455 1432 G8JLG1;A0A384MR33;Q14683;A0A6Q8PHC3 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 1.5 0.5 1 1 41.808 41.846 2 0.00013933 10897 20230619_1880_Aki_TMTPro18x_K_F1 134.51 131.25 87263 63580 100490 100870 100910 129250 99958 114710 133730 107350 151970 158840 146130 126910 116120 94819 187250 179630 80736 58528 101010 99119 104920 128100 101970 117970 134890 110490 154790 157740 147970 130360 122390 100620 178420 169740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 178740000 31347 1432 29446 58927;58928 47565;47566;47567 47566 3 9606 Homo sapiens -0.09226749989284144 YPDHSVDR Unmodified 987.44101 0.44100836 2020 B7ZLP5;A8K329;Q15424;Q15424-4;Q15424-3;B7Z2Z1;Q15424-2;B7Z5X3;B7Z1C7;B7Z2F6;B7Z959 SAFB Scaffold attachment factor B1 yes no 0 0 0 2 0 1 29.218 29.29 3 0.0028514 5490 20230619_1881_Aki_TMTPro18x_K_F2 99.802 73.908 16395 11539 18462 23266 22665 23319 20086 18941 25441 17388 25274 27141 23774 22869 21724 13667 27415 27938 15162 10661 18672 22500 23130 23461 20567 19632 25572 17973 25883 26942 24235 23248 22393 14710 26179 26383 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12784000 31348 2020 29447 58929 47568 47568 1 9606 Homo sapiens -0.05321450664416716 YPDLYPQEDEDEEEEREK Unmodified 2311.9604 0.96044577 197 A0A024R2I5;A0A024R2F8;Q8N4Q1;Q8N4Q1-2 CHCHD4 Mitochondrial intermembrane space import and assembly protein 40 yes no 0 0 1 1 0 1 48.835 48.835 3 0.00028321 13904 20230619_1880_Aki_TMTPro18x_K_F1 78.234 69.755 19414 15868 19459 22626 20710 29725 21028 21021 22230 24822 27849 27837 31593 26206 26983 35694 30210 37630 17952 14582 19809 22367 21475 29295 21231 22180 22818 24979 28471 28091 31902 27593 27749 35794 28925 35693 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9613000 31349 197 29448 58930 47569 47569 1 9606 Homo sapiens -0.14305603115508347 YPDPLIK Unmodified 844.46945 0.46945494 2202 Q96IR1;B2R491;P62701;Q53HV1;Q8TD47 RPS4X;RPS4Y2 40S ribosomal protein S4;40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 0 0 0 7 0.816 1 1 1 53.079 53.153 2 0.043189 15233 20230619_1886_Aki_TMTPro18x_K_F6 92.925 46.359 872640 648810 741070 869480 780170 979070 951010 884520 1022400 1050500 1038100 1080300 1251200 1016500 980020 1229100 1163700 1228500 805440 596010 765360 861030 813060 979120 950970 914810 1038600 1053800 1073800 1093200 1257100 1062100 1012800 1231000 1112100 1166600 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2400000000 31350 2202 29449 58931;58932;58933 47570;47571 47570 2 9606 Homo sapiens 0.04099898982804007 YPDQWIVPGGGMEPEEEPGGAAVR Oxidation (M) 2556.1591 0.15910278 665 A0A024RBD0;B2RE29;A0A024RBG1;Q9NZJ9;Q9NZJ9-2 NUDT4 Diphosphoinositol polyphosphate phosphohydrolase 2 yes no 0 1 0 3 0 1 58.766 58.796 3 0.0031165 17930 20230619_1882_Aki_TMTPro18x_K_F3 63.462 58.369 7941 6988.1 6435.6 9199.3 7944.4 8929.7 9024.4 10370 9680.3 10934 10102 12988 10170 11098 10507 13023 13732 17763 7334.8 6414 6703.3 9101.6 8165.8 9081.3 9058.4 10507 9850.2 11076 10371 13020 10415 11608 10872 13311 13135 16806 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19712000 31351 665 29450 58934 47572 47572 410 1 9606 Homo sapiens -0.05673041017689684 YPDRVPVLVEK Unmodified 1313.7343 0.73433683 2217 B2R5J1 yes yes 0 0 1 7.5 0.5 1 1 49.357 49.435 3 7.9222E-09 13273 20230619_1888_Aki_TMTPro18x_K_F8 150.49 0 276770 226470 258810 277050 188010 238090 201630 214730 253470 330150 313780 323750 392490 312640 237250 474370 286970 402860 255780 207760 263400 275130 201650 243180 204400 224150 258150 327210 322390 328810 390540 331410 248110 469320 274900 382970 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 300940000 31352 2217 29451 58935;58936 47573 47573 1 9606 Homo sapiens 0.09001903665739519 YPDSHQLFVGNLPHDIDENELK Unmodified 2579.2292 0.22923125 755 Q9UN86;Q9UN86-2;A0A024RDE5;A0A024RDB2;A8K6V7;A0A7I2YQD9;A0A7I2V3P9;A0A7I2V3E2;A0A7I2V647;A0A7I2V3Z6;A0A7I2YQL7 G3BP2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 0 6 0 1 56.645 56.717 4 7.5337E-17 16716 20230619_1886_Aki_TMTPro18x_K_F6 153.65 137.35 62434 54111 58785 60260 50726 58472 64751 57560 87381 72421 71824 75226 81963 67065 68227 82680 64450 83690 57725 49586 59912 60354 53768 59261 65151 59297 87078 72525 74875 75959 82654 70290 69500 82849 61835 79408 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 499600000 31353 755 29452 58937 47574 47574 1 9606 Homo sapiens 0.0027858064240717795 YPEAPPFVR Unmodified 1074.5498 0.54983053 3100 I3L0A0;Q13404;Q13404-7;Q13404-2;Q13404-1;G3V2F7;Q13404-6 TMEM189-UBE2V1;UBE2V1 Ubiquitin-conjugating enzyme E2 variant 1 yes no 0 0 0 7 0.816 1 1 1 50.879 50.956 2 0.0012988 14022 20230619_1887_Aki_TMTPro18x_K_F7 117.1 95.591 376320 342920 325800 371250 276710 341480 366930 357470 407860 432840 426680 411510 480870 398670 419460 500190 516510 517660 347830 314110 334750 372340 294150 348010 366070 366190 414110 432730 439150 418460 486170 417170 433410 501730 493260 491480 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 523010000 31354 3100 29453 58938;58939;58940 47575 47575 1 9606 Homo sapiens 0.01553760305864671 YPEAPPSVR Unmodified 1014.5134 0.51344502 1895 A0M8W4;Q15819;G3V113;H0YBX6 UBE2V2 Ubiquitin-conjugating enzyme E2 variant 2 yes no 0 0 0 5 0.707 1 2 1 40.715 40.792 2 0.0055767 9859 20230619_1883_Aki_TMTPro18x_K_F4 93.162 81.441 585290 420000 561490 596850 708170 576560 724540 722400 605150 748870 913010 886590 861960 699260 878350 798110 1016600 834570 540610 386130 574590 588010 722360 588300 726160 728660 635930 758880 920100 887570 881860 732800 899960 802840 970040 792960 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1486199999.9999998 31355 1895 29454 58941;58942;58943;58944 47576;47577 47576 2 9606 Homo sapiens 0.006768834091417375 YPEAQSVASDILR Unmodified 1447.7307 0.73070802 1609;2515 B4DKK3;Q99615;A0A6I8PU73;A0A6I8PU89;A0A6I8PR89;Q59EH7;A0A6I8PUD4;A0A6I8PS32;A0A6I8PIK4;A8K4T2;Q99615-2;B7Z9W6;A0A6I8PRZ0;A0A6I8PLE7;A0A6I8PUC2;K7EIH8;K7ER44;K7EK03;K7EPP7 DNAJC7 DnaJ homolog subfamily C member 7 no no 0 0 0 5.5 0.5 1 1 56.399 56.467 2 1.1748E-07 16395 20230619_1885_Aki_TMTPro18x_K_F5 138.24 104.97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31356 2515;1609 29455 58945;58946 47578;47579 47578 2 9606 Homo sapiens 0.02475189101255637 YPEDDPDYCVWVPPEGQSGDGR Unmodified 2537.0441 0.044132599 879 A0A087X0M4;Q9BWU0;A0A087WWF4;B4DV74;A0A8Q3WKX3 SLC4A1AP Kanadaptin yes no 0 0 0 2 0 1 59.112 59.124 3 2.9744E-05 18279 20230619_1881_Aki_TMTPro18x_K_F2 86.625 83.41 10509 8909.2 10264 11828 10467 12253 11425 9704.6 12327 10090 10124 8928.8 10151 12190 12914 13965 9406 11130 9717.8 8179.1 10460 11705 10888 12297 11489 10110 12414 10155 10493 9242.4 10513 12541 12897 13846 9045.5 10595 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5516600 31357 879 29456 58947 47580 47580 1 9606 Homo sapiens -0.1629077021957528 YPEETLSLMTK Unmodified 1310.6428 0.64280421 3758 P78527;P78527-2;A0A8V8TMR1 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 6.5 0.5 1 1 59.761 59.815 2 2.2419E-08 18068 20230619_1886_Aki_TMTPro18x_K_F6 197.79 161.35 81515 63009 67361 83074 60814 88656 79405 75961 91816 103280 97220 107480 107600 89072 101110 116730 101910 113300 75240 57862 69631 82278 64405 88874 79369 79234 93120 103030 100030 108260 109150 93955 103060 116620 97573 107600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 73830000 31358 3758 29457 58948;58949 47581;47582 47581 2 9606 Homo sapiens -9.147813761956058E-05 YPEHAIHK Unmodified 993.50321 0.50321468 2188 B1AHB0;P33992;Q53FG5;A8K521;B4DQ39;B1AHB1;B3KVF0 MCM5 DNA helicase;DNA replication licensing factor MCM5 yes no 0 0 0 6.5 0.5 1 1 34.216 34.28 4 0.0029042 7330 20230619_1886_Aki_TMTPro18x_K_F6 109.21 84.871 344080 216670 264020 294430 302890 391650 320420 334700 583530 289530 309320 347350 393310 367800 242710 455950 567890 468800 317090 199210 275700 292100 313220 387090 329890 344590 567700 297610 333900 350980 392400 383220 268510 456800 539530 445490 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 170450000 31359 2188 29458 58950;58951 47583;47584;47585 47583 3 9606 Homo sapiens 0.006203204745588664 YPEIINSNQVK Unmodified 1303.6772 0.67721588 3446 P13521;B4DQJ6 SCG2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 7.5 0.5 1 1 51.214 51.291 3 0.023696 14134 20230619_1888_Aki_TMTPro18x_K_F8 58.274 40.948 76496 63783 74666 79223 72595 82426 87214 80416 97902 81026 88969 80618 90122 80491 87520 93131 88967 86851 70728 58519 76007 78784 75985 83057 87404 82339 98711 81891 91709 81919 91847 83677 89153 93028 85094 82565 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 128040000 31360 3446 29459 58952;58953 47586 47586 1 9606 Homo sapiens 0.03752436389345348 YPENFFLLR Unmodified 1197.6182 0.61824444 3705;3704;685 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;B4DJ75;B7ZB67;H0Y3Y6;C9JP48;B4E163;C9J9S3;P62136;A0A140VJS9;P62136-2;A0A7I2V4F7;E9PMD7;B3KXM2;P62136-3;A0A024RBP2;F8W0W8;P36873;P36873-2;Q9UPN1;F8VYE8;F8VR82;A0A087WYY5 HEL-S-80p;PPP1CB;PPP1CA;PPP1CC Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 2.5 0.5 1 1 62.509 62.529 2 0.010637 19735 20230619_1881_Aki_TMTPro18x_K_F2 83.998 23.199 220750 175040 203070 224650 196880 315070 234500 258200 390670 176090 139340 162820 190810 163150 183190 235310 232700 234340 203950 160680 207930 223890 207140 310090 238920 265390 378520 182490 157200 166050 192980 172130 189430 235060 222180 222580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 231520000 31361 3705;3704;685 29460 58954;58955 47587 47587 1 9606 Homo sapiens 0.027340048857013244 YPEPEDK Unmodified 876.38651 0.38651317 1317 A0A1W2PPH1;A0A1W2PQH3;P23368;A0A1W2PR68 ME2 NAD-dependent malic enzyme, mitochondrial yes no 0 0 0 2 0 1 40.959 41.033 2 0.052567 10261 20230619_1881_Aki_TMTPro18x_K_F2 85.064 55.491 112700 68285 125650 134660 150100 167060 129450 141650 149940 140970 190950 205950 185800 159690 159510 103720 203430 214570 104140 63108 126970 130820 153420 165760 132460 146450 153170 144490 193830 204350 188550 163420 164760 111530 194300 202590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57153000 31362 1317 29461 58956 47588;47589 47588 2 9606 Homo sapiens -0.05662462535860868 YPEPERPSSR Unmodified 1216.5836 0.58364985 1533 A0A3F2YNX0;A0A3F2YNZ0;F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5;A4QN18;A0A8I5KPG1;A4QN19 SEC16A Protein transport protein Sec16A yes no 0 0 1 4 0 1 31.365 31.429 3 0.044219 6131 20230619_1883_Aki_TMTPro18x_K_F4 54.094 38.655 29124 20925 28045 27832 32628 40013 34966 36630 40122 26945 41660 40750 35489 33061 32584 33319 39306 36719 26902 19223 28655 27696 33629 39436 35282 37387 40568 28192 42389 40503 36301 34349 33559 33673 37525 34849 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 17323000 31363 1533 29462 58957 47590 47590 1 9606 Homo sapiens -0.015978629930714305 YPETTEGGRPK Unmodified 1233.599 0.59896556 1633 A0A6Q8PGB0;P24928;P24928-2 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 1 4.5 0.5 1 1 34.84 34.909 3 0.0010331 7499 20230619_1885_Aki_TMTPro18x_K_F5 93.166 78.493 55743 42265 49400 59570 62306 70270 62260 66998 90206 75814 88127 96152 109870 90103 78104 86569 116720 99649 51472 38844 50970 58847 63774 70148 63636 68896 90199 76813 91476 96455 109940 92979 82142 87772 111190 94571 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82498000 31364 1633 29463 58958;58959 47591;47592 47592 2 9606 Homo sapiens -0.008489961958730419 YPEYDGR Unmodified 898.3821 0.38209649 1552 A0A494C1B8;P29144;Q5VZU9;B7Z920;A0A494C0U1;A0A494C0X4;A0A494C1S4 TPP2 Tripeptidyl-peptidase 2 yes no 0 0 0 2.5 0.5 1 1 38.263 38.321 2 0.090523 9054 20230619_1881_Aki_TMTPro18x_K_F2 71.342 47.914 160400 137200 139780 160300 171110 194080 186270 187920 203500 237220 257680 230510 242140 191690 200760 266740 272800 231550 148200 125790 144330 160440 175750 193560 187480 193660 208610 236820 260910 233140 245610 203000 209210 264680 260040 220450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 163520000 31365 1552 29464 58960;58961 47593 47593 1 9606 Homo sapiens -0.07115926958749696 YPFEELSQGQQLCK Unmodified 1725.8032 0.80322103 2960 F5GX09;Q5HYJ3;Q5HYJ3-3;Q5HYJ3-2;F5H5F4 FAM76B Protein FAM76B yes no 0 0 0 7 0 1 59.119 59.169 3 3.6724E-05 17484 20230619_1887_Aki_TMTPro18x_K_F7 105.65 93.737 57197 45846 51791 57138 59627 63312 67046 54221 66743 61638 65272 67045 68436 53451 55172 62812 66795 65676 52840 42070 53215 56846 61489 63356 67126 56267 67946 62076 67182 67340 69090 56103 57018 63112 63789 62353 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50994000 31366 2960 29465 58962 47594 47594 1 9606 Homo sapiens -0.030648448875126633 YPFESAEAQLLNK Unmodified 1508.7511 0.75110911 2555 B4DNN4;Q53GZ5;P23921;B4E0I8;E9PL69;B4DXB0;B4DS95;B4DXD1 RRM1 Ribonucleoside-diphosphate reductase;Ribonucleoside-diphosphate reductase large subunit yes no 0 0 0 7 0 1 61.952 61.991 3 0.0003345 18640 20230619_1887_Aki_TMTPro18x_K_F7 94.191 77.529 695800 581890 759280 818770 700340 830450 815980 782900 878820 950610 799500 782360 997780 744110 729480 1048300 906690 927950 643960 534580 765590 807300 735430 837480 818080 807700 889530 946570 832370 800820 998770 785430 758060 1040800 865950 882570 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 475510000 31367 2555 29466 58963 47595;47596 47595 2 9606 Homo sapiens 0.017083597610280776 YPFILPHQQVDK Unmodified 1483.7823 0.78234966 4682 Q9ULC4;Q9ULC4-3;Q9ULC4-2;A0A3B3IRV3 MCTS1 Malignant T-cell-amplified sequence 1 yes no 0 0 0 2 0 1 53.359 53.387 3 3.5007E-13 15890 20230619_1881_Aki_TMTPro18x_K_F2 200.82 167.59 219110 181470 193370 222680 189920 205740 213890 217060 234880 241760 229810 241830 267270 210870 238310 291560 250760 265140 202420 166480 198680 221280 198220 209630 214970 221670 238040 242960 237760 244510 270110 222850 243830 290060 239900 252060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 645430000 31368 4682 29467 58964 47597 47597 1 9606 Homo sapiens 0.05980977585772962 YPGPLHHQAQR Unmodified 1302.6582 0.6581522 1058 P26378-4;A0A494C0F8;P26378;P26378-3;P26378-1;P26378-5;P26378-2;A0A494C147;B1APY9;A0A494C1D9;A0A0R4J2E6;B7Z5E0;A0A494C015 ELAVL4 ELAV-like protein 4;ELAV-like protein yes no 0 0 0 3.67 3.09 1 1 1 28.028 28.062 4 0.00020282 5277 20230619_1880_Aki_TMTPro18x_K_F1 107.79 87.459 137140 110600 133560 166410 166810 190470 179520 167800 212600 100670 99903 83472 93496 78630 126870 109790 122840 75165 126770 101700 136710 163650 171070 190150 181140 171260 209860 105050 107500 85517 97277 82879 128090 107960 117240 71934 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 106020000 31369 1058 29468 58965;58966;58967 47598;47599;47600;47601;47602 47598 5 9606 Homo sapiens 0.0189294460894871 YPGPQAEGDSEGLSQGLVDR Unmodified 2073.9603 0.96032661 3428 P10645 CHGA Chromogranin-A;Vasostatin-1;Vasostatin-2;EA-92;ES-43;Pancreastatin;SS-18;WA-8;WE-14;LF-19;Catestatin;AL-11;GV-19;GR-44;ER-37;GE-25;Serpinin-RRG;Serpinin;p-Glu serpinin precursor yes yes 0 0 0 2.5 0.5 1 1 51.2 51.258 3 2.3832E-37 14993 20230619_1881_Aki_TMTPro18x_K_F2 173.13 162.66 177630 160940 193180 222430 177060 216420 215750 207130 231600 247200 212860 196870 248650 200450 192540 261690 220030 231800 164480 147780 194920 219420 186330 219000 215800 213370 234500 246160 220700 202350 249920 209960 198680 260110 210340 220440 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 292410000 31370 3428 29469 58968;58969 47603;47604;47605;47606 47604 4 9606 Homo sapiens -0.03369513534335056 YPGSTFMDHVLR Oxidation (M) 1437.6711 0.67108465 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 1 0 8 0 1 44.605 44.623 3 0.00072031 11336 20230619_1888_Aki_TMTPro18x_K_F8 96.551 79.311 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31371 161 29470 58970 47607 47607 101 1 9606 Homo sapiens -0.03024405113797002 YPGVSNYQVEEDIGK Unmodified 1696.7944 0.79443049 3858 Q13564-3;Q13564-2;Q13564;Q13564-4;J3QLH4;J3KTE3 NAE1 NEDD8-activating enzyme E1 regulatory subunit yes no 0 0 0 4 0.816 1 1 1 54.948 54.99 3 0.00090386 16171 20230619_1883_Aki_TMTPro18x_K_F4 76.211 60.558 56177 50665 57276 53616 54635 62690 66387 59676 63768 75681 73747 77278 89038 71149 68736 80907 81526 81040 51986 46402 58040 54061 57265 62654 66179 61610 65583 75659 75879 78151 89392 74134 71023 81125 77877 76973 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 256230000 31372 3858 29471 58971;58972;58973 47608 47608 1 9606 Homo sapiens -0.026094952523635584 YPHLPCLQVGQEQK Unmodified 1695.8403 0.84027524 1948;1608 Q5TA58;B3KME0;B2RAD8;A0A6I8PTZ8;Q9UL18;A0A8V8TNY0;A0A8V8TQA7;Q9HCK5;A4FVC0;Q9UKV8-2;Q9UKV8 AGO1;AGO4;EIF2C2;AGO2 Protein argonaute;Protein argonaute-1;Protein argonaute-4;Protein argonaute-2 no no 0 0 0 1 0 1 51.186 51.186 3 5.2714E-07 14775 20230619_1880_Aki_TMTPro18x_K_F1 135.04 123.46 39431 32520 37962 45133 40362 48135 39019 45468 48532 49288 47326 47747 56040 44890 42285 60344 53072 61766 36451 29873 38764 44562 41746 48366 39740 46721 48888 49561 48982 48468 56256 47238 43939 60410 50735 58619 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112880000 31373 1608;1948 29472 58974 47609 47609 1 9606 Homo sapiens 0.0201887144887678 YPHMLSVK Unmodified 973.50552 0.50552287 4714 Q9Y333 LSM2 U6 snRNA-associated Sm-like protein LSm2 yes yes 0 0 0 3 0 1 45.539 45.614 3 0.0021693 12109 20230619_1882_Aki_TMTPro18x_K_F3 106.91 66.58 100370 84748 101160 98171 115270 144480 109690 120560 160920 91504 87422 75908 80348 69719 93118 85161 91830 72032 92838 77698 102910 98658 118700 141990 112480 123960 157910 93725 92784 77621 82885 72927 94341 84636 87738 68628 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80273000 31374 4714 29473 58975 47610 47610 1 9606 Homo sapiens 0.017710328880070847 YPHVEDYR Unmodified 1077.488 0.48795855 180 V9HWJ8;A0A024R203;P61289;P61289-3;P61289-2;K9J957;Q6FHK7;B3KQ25;K7ESG5 HEL-S-283;PSME3 Proteasome activator complex subunit 3 yes no 0 0 0 3.5 0.5 1 1 37.4 37.454 3 0.0047143 8481 20230619_1883_Aki_TMTPro18x_K_F4 95.099 74.769 48481 34668 52520 49989 57187 60730 56078 60578 71084 59640 62051 57442 63762 54820 55679 50714 67059 62326 44824 31878 53066 49363 58993 60579 57085 61844 71185 60283 64124 58318 64653 56442 57355 51704 64019 59092 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71909000 31375 180 29474 58976;58977 47611;47612 47612 2 9606 Homo sapiens -0.047685911132930414 YPHVEDYRR Unmodified 1233.5891 0.58906958 180 V9HWJ8;A0A024R203;P61289;P61289-3;P61289-2;K9J957;Q6FHK7;B3KQ25;K7ESG5 HEL-S-283;PSME3 Proteasome activator complex subunit 3 yes no 0 0 1 5.5 0.5 1 1 33.571 33.634 3 1.8497E-06 7081 20230619_1886_Aki_TMTPro18x_K_F6 186.76 163.16 49859 37350 48064 51672 54754 56235 51657 57564 66616 57360 61465 57919 56729 50331 52470 54681 65261 54054 46065 34321 49088 51058 56257 56547 52746 58691 66790 58010 63066 58521 57875 52389 54143 54848 62240 51389 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 40540000 31376 180 29475 58978;58979 47613;47614 47614 2 9606 Homo sapiens -0.018381394105972504 YPHYFPVMK Unmodified 1180.5739 0.57393679 2141 A8K9T8;Q9BYT8;B3KU23;E9PCB6;Q9BQD0 NLN Neurolysin, mitochondrial yes no 0 0 0 4 0 1 51.63 51.657 3 0.0042941 14691 20230619_1883_Aki_TMTPro18x_K_F4 75.738 56.781 100190 82162 113260 128920 121320 160000 138700 153440 167980 171380 156320 158280 165760 139490 147720 166150 165140 165900 92742 75586 114240 126680 126050 159140 139770 157600 169090 171830 161350 160600 168020 145940 151600 166480 157840 157580 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 119120000 31377 2141 29476 58980 47615 47615 1 9606 Homo sapiens -0.009127225321435617 YPIDTLPTSK Unmodified 1133.5968 0.5968403 2525 B4DM26;B4DLE7;Q6UWP7-3;Q6UWP7 LCLAT1 Lysocardiolipin acyltransferase 1 yes no 0 0 0 8 0 1 53.393 53.467 3 0.012723 15037 20230619_1888_Aki_TMTPro18x_K_F8 61.65 38.274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31378 2525 29477 58981 47616 47616 1 9606 Homo sapiens 0.03538575066318117 YPIEHGIITNWDDMEK Oxidation (M) 1975.8986 0.89857798 2695 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;A6NL76;B3KW67;Q7Z7J6;A0A804HKV3;Q13707;B4DUI8;B7Z6I1;F6QUT6;F6UVQ4;C9JFL5;B8ZZJ2;F8WB63 ACTA1;ACTC1;ACTA2;ACTG2 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle yes no 0 1 0 4.33 1.75 2 2 2 4 5 4 2 54.091 54.138 3;4 2.4564E-06 15871 20230619_1882_Aki_TMTPro18x_K_F3 115.56 105.46 2224100 1829700 2089800 2485000 2580300 2783300 2675900 2688700 2748500 2882700 2799800 2615900 3170600 2412200 2570800 2922600 2790800 2900700 2055600 1680300 2143900 2458700 2643300 2789300 2694700 2758100 2799900 2894500 2884900 2661600 3193600 2523700 2638800 2926600 2668800 2755000 19 19 19 19 19 19 19 19 19 19 19 19 19 19 19 19 19 19 41499000000 31379 2695 29478 58982;58983;58984;58985;58986;58987;58988;58989;58990;58991;58992;58993;58994;58995;58996;58997;58998;58999;59000;59001;59002 47617;47618;47619;47620;47621;47622;47623;47624;47625;47626;47627;47628;47629;47630;47631;47632;47633 47619 1618 17 9606 Homo sapiens -0.05033536487121637 YPIEHGIITNWDDMEK Unmodified 1959.9037 0.90366336 2695 B7Z6P1;P68133;P68032;P62736;P63267;D2JYH4;A8K3K1;A6NL76;B3KW67;Q7Z7J6;A0A804HKV3;Q13707;B4DUI8;B7Z6I1;F6QUT6;F6UVQ4;C9JFL5;B8ZZJ2;F8WB63 ACTA1;ACTC1;ACTA2;ACTG2 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle yes no 0 0 0 4.58 1.85 2 2 2 2 2 1 1 57.719 57.757 3;4 4.0229E-15 17442 20230619_1882_Aki_TMTPro18x_K_F3 190.11 184.79 2791800 2163700 2607000 2959800 2558600 3499500 3138600 3331500 3507200 4085600 3178700 3511100 4259300 3427800 3287600 3823800 3602400 3734800 2579300 1987700 2666200 2929700 2682900 3491300 3142700 3433600 3544600 4070400 3326000 3584900 4265300 3561200 3380400 3830000 3444700 3547800 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 10 17766000000 31380 2695 29478 59003;59004;59005;59006;59007;59008;59009;59010;59011;59012;59013;59014 47634;47635;47636;47637;47638;47639;47640;47641;47642;47643 47637 10 9606 Homo sapiens -0.03789232624490069 YPIEHGIVTNWDDMEK Oxidation (M) 1961.8829 0.88292792 3112;3679;3167 P63261;I3L4N8;Q8WVW5;B4E3A4;A0A804GS07;B4DVQ0;A0A6Q8PFE4;I3L3I0;I3L1U9;J3KT65;I3L3R2;A1E282;K7EM38;P60709;Q1KLZ0;Q53G76;Q53G99;Q53GK6;B4E335;E7EVS6;A0A2R8Y793;A0A2R8YGF8;A0A6Q8PH58;G5E9R0;C9JZR7;C9JUM1 ACTG1;ACTB;PS1TP5BP1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed no no 0 1 0 4 0 1 53.678 53.697 3 0.014512 15662 20230619_1883_Aki_TMTPro18x_K_F4 55.097 47.183 101740 69207 86095 83475 129930 124440 105200 110150 118900 122270 119890 89595 119250 102160 92096 139560 110460 129480 93854 63530 89373 83678 130730 122450 107930 113740 120490 121960 122690 93038 120450 106970 95418 138920 105640 123020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 80834000 31381 3112;3167;3679 29479 59015 47644 47644 1810 1 9606 Homo sapiens -0.059538230041880524 YPIFVEK Unmodified 894.48511 0.485105 2051 A8K4T6;Q16401-2;Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 yes no 0 0 0 5.33 3.09 1 1 1 56.687 56.726 2 0.03131 16439 20230619_1888_Aki_TMTPro18x_K_F8 100.74 51.152 231490 230190 225870 227710 212040 285650 257240 260100 278010 282680 266280 288950 316010 250580 271080 326310 319790 330860 214290 210630 229800 231080 222970 283850 257440 268030 281720 284660 276090 291740 318740 263860 279430 326770 305580 314160 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 176510000 31382 2051 29480 59016;59017;59018 47645;47646 47646 2 9606 Homo sapiens 0.03364185499856376 YPLAAAAERPPR Unmodified 1310.7095 0.70951906 4175 Q7Z5L9-2;Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes no 0 0 1 2 0 1 40.811 40.884 3 3.2231E-07 10188 20230619_1881_Aki_TMTPro18x_K_F2 161.19 117.94 181190 132360 151410 169660 164740 183800 180190 184670 201390 212870 236510 232130 235660 214180 205910 219930 277170 260370 167200 121540 156600 168450 170580 184790 181490 189340 205400 214190 240920 234160 239280 221830 213900 223160 264390 246940 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 295990000 31383 4175 29481 59019 47647 47647 1 9606 Homo sapiens 0.0665926858300736 YPLAVRPFYTMPDPR Oxidation (M) 1837.9185 0.91852556 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 1 1 4.5 0.5 1 1 53.22 53.266 3 0.066936 15131 20230619_1885_Aki_TMTPro18x_K_F5 46.206 28.405 68742 61249 66558 74590 77640 76121 79144 74700 78676 58918 66444 47298 49856 41361 74338 71320 60099 44785 63582 56170 68000 74252 79718 76855 79687 76014 79614 60064 67947 48476 52563 44415 74358 69718 57534 42874 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 69135000 31384 1207 29482 59020;59021 47648 47648 743 1 9606 Homo sapiens 0.0330830403413529 YPLAVRPFYTMPDPR Unmodified 1821.9236 0.92361094 1207 A0A140VJW5;P14868;D3DP78;P14868-2;Q53T60 DARS Aspartate--tRNA ligase, cytoplasmic yes no 0 0 1 5.5 0.5 1 1 57.605 57.669 3 2.0355E-05 17135 20230619_1886_Aki_TMTPro18x_K_F6 109.22 88.558 216160 194850 207320 214030 177190 230570 234430 225560 236100 167350 174420 116700 140440 121460 218510 190060 169050 118290 199930 178510 210990 214880 188210 231730 233100 229240 237680 170840 180170 121310 148130 128680 217930 185980 161880 113300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 314650000 31385 1207 29482 59022;59023 47649;47650 47650 2 9606 Homo sapiens 0.04552607896744121 YPLFEGQETGKK Unmodified 1395.7034 0.70343063 3576 P41250-2;P41250;A0A6Q8PGA8;A0A6Q8PGI6;A0A6Q8PGZ8;A0A6Q8PHH9;A0A6Q8PGW4 GARS Glycine--tRNA ligase yes no 0 0 1 7.5 0.5 1 1 49.565 49.643 3 0.00054181 13348 20230619_1888_Aki_TMTPro18x_K_F8 94.191 82.979 536580 428400 509260 526870 473860 543370 530400 514620 545590 733280 760410 888500 860850 679910 839480 851030 794560 905070 495880 393070 519170 524260 496670 547600 532320 533730 564390 733600 775520 887360 873810 717470 851630 855470 761430 858660 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1366800000 31386 3576 29483 59024;59025 47651;47652 47651 2 9606 Homo sapiens 0.021407055608278824 YPLIIDPSGQATEFIMNEYK Unmodified 2328.1348 0.13478551 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 7.5 0.5 1 1 65.103 65.126 3 5.0679E-30 20137 20230619_1887_Aki_TMTPro18x_K_F7 210.39 198.47 79615 57515 79805 87451 62087 83661 85590 83717 95635 109110 105700 123700 121650 108600 105420 137030 122320 154590 73566 52918 80855 85770 66643 84819 85276 86230 97333 109330 108800 124370 122930 114020 108600 138120 117100 146530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 230610000 31387 3881 29484 59026;59027 47653;47654 47653 2 9606 Homo sapiens 0.023843505667173304 YPLPVFSTFVLTGSSAK Unmodified 1812.9662 0.96618726 4081 Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7;R4GMN2 DENND4C DENN domain-containing protein 4C yes no 0 0 0 6.5 0.5 1 1 65.067 65.103 3 1.8322E-06 20129 20230619_1887_Aki_TMTPro18x_K_F7 110.97 96.044 35850 27055 35965 34773 35176 43935 39255 41239 43933 36072 44027 42283 40579 37137 43054 43232 42369 51426 33134 24841 36513 34607 36752 43649 39503 42168 44455 36935 45015 42495 41658 38799 43704 43802 40608 48725 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 56028000 31388 4081 29485 59028;59029 47655 47655 1 9606 Homo sapiens 0.09222281505958563 YPMAVGLNK Oxidation (M) 1007.511 0.51100218 4731 Q9Y3U8;J3QSB5;J3KTD3 RPL36 60S ribosomal protein L36 yes no 0 1 0 1.5 0.5 1 1 47.933 48.004 2 0.00028167 13452 20230619_1881_Aki_TMTPro18x_K_F2 138.25 112.8 106180 82121 82362 94174 129570 125940 110200 114010 125980 62018 71279 67452 59130 56110 111730 78690 67559 49661 97965 75307 86406 94531 130280 124710 112670 115880 125080 65742 75265 67949 63263 59360 110060 77213 64943 47542 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 568590000 31389 4731 29486 59030;59031 47656;47657 47657 2885 2 9606 Homo sapiens 0.007547116798377829 YPMAVGLNK Unmodified 991.51609 0.51608756 4731 Q9Y3U8;J3QSB5;J3KTD3 RPL36 60S ribosomal protein L36 yes no 0 0 0 2.5 0.5 1 1 53.071 53.13 3 0.00010777 15518 20230619_1882_Aki_TMTPro18x_K_F3 113.5 76.308 319060 268600 266870 289020 284850 375330 322560 327380 371600 191720 160250 123550 186580 141930 192890 201470 202030 129500 294680 246090 275930 291390 296130 371760 324420 334060 366880 199350 175360 129470 189910 148980 196550 197470 192710 124030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 557160000 31390 4731 29486 59032;59033 47658;47659 47659 2 9606 Homo sapiens 0.01999015542446614 YPMAYVDYK Unmodified 1148.5212 0.52123251 3941 Q15785;B4DXU3 TOMM34 Mitochondrial import receptor subunit TOM34 yes no 0 0 0 8 0 1 56.224 56.281 2 0.00022807 16263 20230619_1888_Aki_TMTPro18x_K_F8 131.06 98.222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31391 3941 29487 59034 47660 47660 1 9606 Homo sapiens -0.047087253856034295 YPMEHGIVK Oxidation (M) 1088.5325 0.5324659 1483 A0A384NQ21;P61163;R4GMT0;B4DM97;A0A1B0GVS3;B4DXP9 ACTR1A Alpha-centractin yes no 0 1 0 6 0 1 39.413 39.501 3 0.0010277 9337 20230619_1886_Aki_TMTPro18x_K_F6 94.692 70.662 106720 85334 106470 102500 137650 121890 116350 132980 133620 98611 120710 107400 99413 91995 128650 106050 131860 113140 98665 78278 108580 102410 139720 122120 119140 134090 134510 101790 123500 108210 103590 96120 130350 106820 126000 107450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 340680000 31392 1483 29488 59035 47661 47661 986 1 9606 Homo sapiens -0.008259032914565978 YPMEHGIVK Unmodified 1072.5376 0.53755128 1483 A0A384NQ21;P61163;R4GMT0;B4DM97;A0A1B0GVS3;B4DXP9 ACTR1A Alpha-centractin yes no 0 0 0 7.5 0.5 1 1 43.768 43.817 3 0.0019278 10994 20230619_1888_Aki_TMTPro18x_K_F8 90.906 61.162 397660 338110 377050 415920 388200 485210 420730 424740 494240 418900 412210 373110 442120 357080 424970 437630 422300 406640 367640 310150 385210 414480 403800 483850 424620 437910 495960 422500 427890 380530 449350 373230 432360 436750 403970 386610 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 412390000 31393 1483 29488 59036;59037 47662;47663 47663 2 9606 Homo sapiens 0.004184005711522332 YPMEHGVVR Oxidation (M) 1102.523 0.52296385 3577 P42025;Q13841 ACTR1B Beta-centractin yes no 0 1 0 4.5 0.5 1 1 31.678 31.748 3 0.03249 6275 20230619_1883_Aki_TMTPro18x_K_F4 50.834 38.246 60117 30174 82485 66716 136380 146830 91751 118900 135760 35196 39258 40529 35855 26984 50791 29677 39167 36085 55626 27969 82635 65359 136200 141640 96446 120990 131690 40406 44704 40496 37427 28446 50624 30209 37566 34217 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 60509000 31394 3577 29489 59038;59039 47664 47664 2246 1 9606 Homo sapiens -0.024196715769903676 YPNCPTDVR Unmodified 1120.4971 0.49714303 2107 Q53TH5;Q96B14;A8K7H4;O43929-2;O43929-3;O43929;B7Z632;CON__Q2YDI2 ORC4L;ORC4 Origin recognition complex subunit 4 yes no 0 0 0 4.5 0.5 1 1 37.505 37.573 2 0.030862 8515 20230619_1885_Aki_TMTPro18x_K_F5 82.75 52.189 + 61127 53303 67358 73052 73235 83573 80022 80004 93056 89449 94664 89345 106090 87782 74121 109940 116060 103870 56593 48948 68040 72270 75799 83606 80698 82224 94135 89913 97472 90718 106430 91780 78439 109680 110550 98764 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57824000 31395 2107 29490 59040;59041 47665;47666 47666 2 9606 Homo sapiens -0.05828565819297182 YPNPEEGK Unmodified 932.42396 0.42396131 4351 Q96G03;B4DN40;Q96G03-2 PGM2 Phosphoglucomutase-2 yes no 0 0 0 3.5 0.5 1 1 41.154 41.213 2 0.011433 10086 20230619_1882_Aki_TMTPro18x_K_F3 96.668 57.85 57635 39387 54900 63636 73478 81017 78756 72446 90129 81627 91932 96654 106600 83350 69802 90944 121890 106170 53218 36275 56344 62448 75003 80372 79414 74860 91232 82487 94863 96973 106590 86869 74604 92058 116010 100740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40004000 31396 4351 29491 59042;59043 47667;47668 47667 2 9606 Homo sapiens -0.044953712702408666 YPPPTELLDLQPLPVSALR Unmodified 2118.1725 0.17249164 3312 O75643;A4FU77;A0A494C1A5 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes no 0 0 0 1.33 0.471 2 1 64.631 64.634 3 5.4414E-11 20408 20230619_1880_Aki_TMTPro18x_K_F1 142.35 116.65 21105 19245 18458 20611 20759 24380 23962 23375 26198 23978 20879 20510 28673 21198 24961 25674 27451 30090 19509 17626 19023 20759 21484 24347 24036 23961 26362 24103 22015 21008 28823 22110 25588 25970 26260 28523 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 53630000 31397 3312 29492 59044;59045;59046 47669;47670;47671 47670 3 9606 Homo sapiens 0.15813229614514057 YPQLLPGIR Unmodified 1055.6128 0.61276513 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 0 4 0.816 1 1 1 56.556 56.577 2 0.014679 16825 20230619_1883_Aki_TMTPro18x_K_F4 89.142 65.187 415510 367470 371360 396320 313690 409800 344730 344680 405600 472920 474770 473130 520270 422920 489340 563980 473420 543850 384060 336630 380210 398150 331940 411910 347930 360140 412900 471050 485870 478720 527860 445450 497710 563120 453610 516500 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1250500000 31398 1439 29493 59047;59048;59049 47672;47673 47672 2 9606 Homo sapiens 0.08718326093890028 YPSATNNTPAK Unmodified 1162.5619 0.56185177 2710 Q8TEQ6;B7ZLC9 GEMIN5 Gem-associated protein 5 yes no 0 0 0 8 0 1 39.566 39.555 3 0.00015413 9295 20230619_1888_Aki_TMTPro18x_K_F8 115.18 105.1 45156 30639 53291 56046 71674 83446 63364 64390 68216 52275 78124 76122 74522 56549 65704 44908 75483 71204 41773 28269 53759 54808 72781 81799 64533 66769 69536 54234 79509 75516 75698 58417 67384 46863 72097 67367 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 75667000 31399 2710 29494 59050 47674 47674 1 9606 Homo sapiens -0.012926677416317034 YPSLELER Unmodified 1005.5131 0.51311067 4054 Q5SSJ5;Q5SSJ5-2;B0QZK4;Q5SWC8;Q5SSJ5-3 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 4 0 1 49.333 49.368 2 0.0019712 13689 20230619_1883_Aki_TMTPro18x_K_F4 134.15 95.314 412380 332420 380480 415980 392260 435970 488510 460000 499920 376700 357940 379930 457950 400340 403060 441420 432230 459480 381040 305050 389620 413520 409080 439840 487140 466170 502740 385520 378550 386380 461770 414470 412640 443860 413460 436130 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 320970000 31400 4054 29495 59051 47675 47675 1 9606 Homo sapiens 0.010574636892783928 YPSLELERR Unmodified 1161.6142 0.6142217 4054 Q5SSJ5;Q5SSJ5-2;B0QZK4;Q5SWC8;Q5SSJ5-3 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 1 7 0 1 42.829 42.905 3 0.0052566 10448 20230619_1887_Aki_TMTPro18x_K_F7 60.899 35.449 58077 33955 44764 42407 41343 45801 44786 57005 52937 41783 40548 31886 39325 35437 45793 44156 40917 38734 53505 31203 46507 42206 43356 46304 45248 57002 52946 42746 42092 33000 40497 36893 46174 43938 39181 36855 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8977500 31401 4054 29496 59052 47676 47676 1 9606 Homo sapiens 0.039879153919855526 YPSPFFVFGEK Unmodified 1316.6441 0.64412484 3811 Q08211;B3KU66;Q08211-2 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 3 0.816 1 1 1 63.67 63.686 3 4.9384E-05 19971 20230619_1882_Aki_TMTPro18x_K_F3 131.43 88.309 426190 367810 412880 447900 390360 477570 475090 454370 504980 530320 530120 485960 557770 424690 504720 595500 493670 509050 394120 337340 420490 446150 409870 480060 475080 467880 513940 530490 543650 493570 565460 449280 514080 590580 472550 484360 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1455200000 31402 3811 29497 59053;59054;59055 47677;47678 47678 2 9606 Homo sapiens -0.0015314566269353236 YPSPPMGSVSAPNLPTAEDNLEYVR Oxidation (M) 2719.2799 0.27994619 3590 P46109 CRKL Crk-like protein yes yes 0 1 0 6 0 1 58.733 58.799 3 2.6958999999999997E-28 17610 20230619_1886_Aki_TMTPro18x_K_F6 193.87 158.34 6364.5 6184 7633.2 7742.7 7994.4 6536.4 7769.3 7228.1 8287.9 8192.1 9432.2 8601.5 9597.6 7513.4 9827.3 11635 8166.9 8570.9 5901.7 5671.1 7651.4 7677.4 8246.8 6724.6 7865.4 7366.7 8460.1 8239.2 9627.5 8688.2 9793.7 8001.4 9908.2 11450 7832.9 8171.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43673000 31403 3590 29498 59056 47679 47679 2260 1 9606 Homo sapiens -0.01092258094877252 YPVELEW Unmodified 934.44363 0.44363412 2042 Q53H22;A8K4H7;Q06203;Q59G63 PPAT Amidophosphoribosyltransferase yes no 0 0 0 4 0 1 64.814 64.824 2 0.085448 20341 20230619_1883_Aki_TMTPro18x_K_F4 71.995 58.001 16183 12114 15748 19285 11782 15889 12214 14010 18938 20083 21164 22906 18752 17836 20067 20212 22832 25230 14952 11150 15994 18826 12602 16268 12515 14612 19004 20056 21516 22939 19293 18689 20537 20553 21836 23901 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22287000 31404 2042 29499 59057 47680 47680 1 9606 Homo sapiens -0.02620995259474057 YPVGVHFLPK Unmodified 1155.6441 0.64406526 1439 A0A384MTQ3;P23526;P23526-2;Q1RMG2 AHCY Adenosylhomocysteinase yes no 0 0 0 4 0 1 52.542 52.566 3 0.00011814 15161 20230619_1883_Aki_TMTPro18x_K_F4 108.98 60.886 76510 61561 68850 93914 66514 137340 82056 87178 135560 122700 122030 185110 215510 196730 120510 250000 238360 451860 70680 56619 70778 92612 70329 134210 83470 93485 134590 124150 130240 185490 212720 205650 131500 261100 228400 426260 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239580000 31405 1439 29500 59058 47681 47681 1 9606 Homo sapiens 0.07246899127972029 YPVNSVNILK Unmodified 1145.6445 0.64445919 3470 P17987;E7ERF2;E7EQR6 TCP1 T-complex protein 1 subunit alpha yes no 0 0 0 2.5 0.5 2 2 55.727 55.758 2;3 3.4328E-05 16654 20230619_1882_Aki_TMTPro18x_K_F3 153.05 88.781 250100 208600 224500 237900 214660 256590 245630 234920 255090 305990 289390 272510 332400 256710 277060 353810 307690 312630 231090 191230 230140 238140 224770 257570 246230 243410 261020 304350 297050 277770 335080 270560 284830 351440 294130 297350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1014399999.9999999 31406 3470 29501 59059;59060;59061;59062 47682;47683 47683 2 9606 Homo sapiens 0.07746274057171831 YPVPENWLHK Unmodified 1281.6506 0.6506072 3568 Q6FHX6;P39748;B4DWZ4;P39748-2;I3L3E9 FEN1 Flap endonuclease 1 yes no 0 0 0 1.5 0.5 1 1 54.565 54.577 3 7.8421E-05 16409 20230619_1881_Aki_TMTPro18x_K_F2 133.89 94.745 364140 314380 311990 352970 271660 375370 326800 381380 476350 509020 401270 555710 692620 631020 328380 847150 758490 873980 336430 288120 320980 353670 287870 377920 331050 392440 474520 509170 428560 564680 681200 659740 366960 847600 722360 829400 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 660820000 31407 3568 29502 59063;59064 47684;47685;47686 47686 3 9606 Homo sapiens 0.02104792288673707 YPVYGVQWHPEK Unmodified 1501.7354 0.73539946 1681 A0A7I2YQQ3;A8K335;Q92820 GGH Gamma-glutamyl hydrolase yes no 0 0 0 2 0 1 51.662 51.707 3 7.2761E-05 15224 20230619_1881_Aki_TMTPro18x_K_F2 114.72 93.851 67492 58488 65590 81239 67635 92695 83494 81268 100150 85909 93269 91322 92896 84861 81776 110620 107490 111410 62417 53718 66946 80271 70680 92531 83761 83952 100750 86786 95978 92308 94370 89086 84933 110700 102630 105790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27219000 31408 1681 29503 59065 47687 47687 1 9606 Homo sapiens 0.004601180346526235 YPYWPHQPIENL Unmodified 1555.746 0.74596415 3323 O75947;O75947-2 ATP5H ATP synthase subunit d, mitochondrial yes no 0 0 0 7 0 1 60.58 60.622 2 0.062418 18091 20230619_1887_Aki_TMTPro18x_K_F7 61.48 43.661 57542 46830 66886 67903 56955 66511 68258 60897 78298 74223 69236 63422 66156 56191 73909 79865 70880 75390 53277 43042 67031 66806 60257 67210 68480 62990 78838 73988 71313 64661 67988 59460 74889 79604 67878 71637 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 45392000 31409 3323 29504 59066 47688 47688 1 9606 Homo sapiens -0.009678993108764189 YQAEIPDRLVEGESDNR Unmodified 1989.9392 0.93919724 317 A0A024R534;O94776 MTA2 Metastasis-associated protein MTA2 yes no 0 0 1 2.5 0.5 1 1 47.79 47.865 3 0.00021486 13460 20230619_1881_Aki_TMTPro18x_K_F2 87.388 68.555 41287 31701 36878 40601 37979 47861 44709 41742 50525 47747 45442 44159 53313 42858 41300 53621 58089 49504 38128 29104 37879 40357 39604 47688 44858 43231 50951 47842 47189 44964 53595 44832 43198 53446 55357 47095 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 71469000 31410 317 29505 59067;59068 47689 47689 1 9606 Homo sapiens -0.016174788431726483 YQASHPNLR Unmodified 1084.5414 0.5413911 3359 O95721;C9JAF7 SNAP29 Synaptosomal-associated protein 29;Synaptosomal-associated protein yes no 0 0 0 7.5 0.5 1 1 30.686 30.697 3 5.2961E-07 5592 20230619_1887_Aki_TMTPro18x_K_F7 142.56 119.01 29695 21944 28506 31129 33073 33996 31077 29020 38346 30211 44169 40699 42731 32901 39066 33950 48504 34458 27433 20171 29135 30705 33932 34045 31679 30042 38839 30807 44951 40593 43463 34257 40274 34153 46220 32774 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100770000 31411 3359 29506 59069;59070 47690;47691 47690 2 9606 Homo sapiens 0.0025020638922796934 YQDEVFGGFVTEPQEESEEEVEEPEER Unmodified 3215.3579 0.35785798 3846 Q13283;Q5U0Q1;Q6FI03;Q53HH4;Q32P45;A0A7I2YQN9;A0A7I2V5M7;A0A7P0P2U7;A0A7I2YQU8;A0A7I2V651;A0A7I2V2V1 G3BP1;DKFZp686L1159;G3BP Ras GTPase-activating protein-binding protein 1 yes no 0 0 0 1 0 1 61.732 61.732 3 6.792999999999999E-39 19180 20230619_1880_Aki_TMTPro18x_K_F1 206.94 203.67 9656.3 7871.3 10191 11097 8905.7 11700 9792.1 11338 12911 13347 15777 13710 14028 12161 12608 13934 14189 15514 8932.8 7232.2 10295 10946 9394.6 11770 9928.4 11658 13087 13391 15958 13857 14305 12691 12941 14058 13570 14713 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38074000 31412 3846 29507 59071 47692 47692 1 9606 Homo sapiens -0.1612066327706998 YQDILVFR Unmodified 1052.5655 0.56548059 3479 P19623;K7EKM4 SRM Spermidine synthase yes no 0 0 0 3.67 3.09 1 1 1 59.676 59.692 2 0.0017919 18370 20230619_1880_Aki_TMTPro18x_K_F1 137 108.11 1072600 822760 949780 1097400 670310 829690 967560 961070 931010 1277100 1189700 1278000 1292000 1107900 1184900 1428100 1323100 1546600 990520 755660 971790 1082100 727070 862120 957890 981700 962350 1272800 1213700 1291300 1310300 1165600 1215900 1435800 1266200 1466900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 354940000 31413 3479 29508 59072;59073;59074 47693;47694;47695 47693 3 9606 Homo sapiens 0.04130046822888289 YQDLGAYSSAR Unmodified 1229.5677 0.56766543 2102 H3BPJ9;A8K761;O96000 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes no 0 0 0 6.67 0.471 1 2 44.45 44.536 2 1.0713E-08 11459 20230619_1886_Aki_TMTPro18x_K_F6 198.62 182.05 263440 235160 229650 268000 323630 342150 318460 325580 349270 236320 326710 346510 310730 278490 334020 300100 336770 333290 243480 215520 237750 268940 328540 340020 322270 331370 352690 247130 335800 344560 318850 290530 339200 303230 322160 316220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 251390000 31414 2102 29509 59075;59076;59077 47696;47697;47698 47696 3 9606 Homo sapiens -0.03793569229969762 YQDLYTVEPNNAR Unmodified 1581.7423 0.74233534 1875 A0A994J595;P54289-4;P54289-5;P54289;Q9UIU0;P54289-3;P54289-2;E7ERK3;Q9UDU5 CACNA2D1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 4 0 1 48.864 48.902 2 1.3159E-11 13455 20230619_1883_Aki_TMTPro18x_K_F4 193.28 160.76 35231 34464 39201 34593 32865 32524 43002 38928 36120 27049 36147 33507 33323 25566 36880 31918 31102 34799 32647 31541 39368 34942 34840 33221 42566 39031 37135 28165 36963 33485 34239 26982 37095 32150 29840 33009 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 22033000 31415 1875 29510 59078 47699 47699 1 9606 Homo sapiens -0.02526613875397743 YQDTPGVK Unmodified 906.4447 0.44469675 161 A0A024R1T9;Q4LE36;P53396;A0A024R1Y2;P53396-2;P53396-3;Q8N9C4 ACLY;ACLY variant protein ATP-citrate synthase yes no 0 0 0 5.5 0.5 1 1 40.626 40.716 2 0.0022557 9807 20230619_1885_Aki_TMTPro18x_K_F5 143.45 95.336 501460 239240 605080 558770 593180 711360 506650 637270 548220 560930 888170 1005200 802440 757640 786340 361610 985160 901340 463270 222050 605520 539520 614980 705220 518180 653920 569290 584230 892320 990630 821350 768910 808360 401510 940090 850680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 772940000 31416 161 29511 59079;59080 47700;47701 47700 2 9606 Homo sapiens -0.012267808905789934 YQEEFEHFQQELDK Unmodified 1868.8217 0.82170787 193 Q53FS4;B2R774;A0A024R2A7;P49257;A0PJ85 LMAN1 Protein ERGIC-53 yes no 0 0 0 2 0.816 1 1 1 59.029 59.043 3 6.9379E-12 18240 20230619_1881_Aki_TMTPro18x_K_F2 182.35 152.66 94848 84472 93362 96641 79108 104180 102560 103240 115180 113540 119000 149760 141360 118990 118720 161810 152750 177170 87740 77421 94795 96728 84067 104730 102470 105840 116790 115280 123100 149320 142520 126020 123250 162620 145990 168020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 139600000 31417 193 29512 59081;59082;59083 47702;47703 47702 2 9606 Homo sapiens -0.07795011711959887 YQEELEDR Unmodified 1080.4724 0.47236807 1531 D3DVA3;B4DF47;A0A3B3IUD2;A8K3J5;Q9BUK6-7;Q9BUK6-3;Q9BUK6-2;Q9BUK6;A0A8V8TLP0;B4DLS9;Q9BUK6-5 MSTO1 Protein misato homolog 1 yes no 0 0 0 1 0 1 39.973 39.973 2 0.019983 10097 20230619_1880_Aki_TMTPro18x_K_F1 89.029 12.929 40140 27017 44726 52252 55971 59563 54032 59672 61469 64506 66021 65225 68739 57058 63170 57920 81142 65087 37110 24949 45268 50739 57169 59638 54838 61059 62417 64941 67637 65883 69810 59194 65285 58618 77351 61803 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 43838000 31418 1531 29513 59084 47704 47704 1 9606 Homo sapiens -0.0646492242099157 YQEGPDAER Unmodified 1063.4571 0.45705235 933 A0A0A0MRC4;Q86YR5;A0A0A0MSK4;Q86YR5-4 GPSM1 G-protein-signaling modulator 1 yes no 0 0 0 1 0 1 32.378 32.378 2 0.089783 6960 20230619_1880_Aki_TMTPro18x_K_F1 70.399 42 13870 8595 16868 19267 18818 19051 15397 16233 20503 16205 26736 33206 23381 24632 23661 12516 31010 31509 12829 7959.8 16924 18552 19288 19203 15896 16795 20816 16902 27034 32600 24017 25045 24396 13876 29603 29724 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 38166000 31419 933 29514 59085 47705 47705 1 9606 Homo sapiens -0.07213789218189959 YQELINDIAR Unmodified 1233.6354 0.63535107 707 P46940;A4QPB0;A0A024RC65;H0YLE8;B4E2M0;B4DNP4 IQGAP1;hCG_1991735 Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 5.5 0.5 1 1 59.788 59.84 2 0.0003404 18049 20230619_1886_Aki_TMTPro18x_K_F6 131.09 93.36 96395 77173 78296 91033 86376 98127 103140 101570 103540 142180 138190 138420 165820 123780 126740 164800 147780 165110 88983 70779 81254 90897 89574 98779 103050 104600 107040 141320 141330 140220 166380 130430 130940 164840 141310 156750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51695000 31420 707 29515 59086;59087 47706;47707 47707 2 9606 Homo sapiens 0.02787880700839196 YQELPNSGPPHDR Unmodified 1508.7008 0.70080487 1711 A0A7P0TAL9;A0A7P0TBA9;B7ZKK7;P19525-2;P19525;Q8IW76;A0A7P0Z4M0;Q05CP4;Q6PK38 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes no 0 0 0 3 0 1 36.347 36.402 3 7.4875E-08 8135 20230619_1882_Aki_TMTPro18x_K_F3 151.3 137.14 18697 16863 20984 20328 32347 29774 26006 30153 34289 31906 32176 31178 29479 27365 27733 28395 32802 32767 17317 15462 21286 20374 32489 29413 26848 30794 34387 32131 32983 31547 30110 28407 28515 28763 31335 31076 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 91273000 31421 1711 29516 59088 47708 47708 1 9606 Homo sapiens -0.03319749844126818 YQELPNSGPPHDRR Unmodified 1664.8019 0.8019159 1711 A0A7P0TAL9;A0A7P0TBA9;B7ZKK7;P19525-2;P19525;Q8IW76;A0A7P0Z4M0;Q05CP4;Q6PK38 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes no 0 0 1 5.5 0.5 1 1 32.547 32.606 4 7.5492E-07 6735 20230619_1886_Aki_TMTPro18x_K_F6 134.61 108.9 23397 19971 23616 25479 29526 26221 24526 28834 28002 30337 30763 31547 34114 25916 28564 30083 36447 33168 21642 18326 24060 25291 30020 26535 25147 29303 28469 30601 31581 31773 34431 27159 29583 30333 34773 31483 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 68898000 31422 1711 29517 59089;59090 47709;47710 47710 2 9606 Homo sapiens -0.0038929814140828967 YQEQGGEASPQR Unmodified 1348.6008 0.60075648 2457 Q59FH4;H0Y5J4;B4DDU5;Q9UJU6-5;Q9UJU6 DBNL Drebrin-like protein yes no 0 0 0 1.5 0.5 1 1 31.051 31.084 2 1.7905E-05 6118 20230619_1881_Aki_TMTPro18x_K_F2 140.78 126.57 10891 5669.9 12812 16219 25686 25970 16495 24052 18487 16171 24899 34684 23983 23486 26049 11336 24579 25673 10062 5282 13065 15611 25393 25454 17247 24471 18970 17317 25278 33933 24615 23944 26287 12445 23538 24228 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 17572000 31423 2457 29518 59091;59092 47711 47711 1 9606 Homo sapiens -0.059599871779028035 YQEQGGEASPQSR Unmodified 1435.6328 0.63278489 2620 B4DXL9;Q9UJU6-2;Q9UJU6-3;B4DDD6;Q9UJU6-4;B4DUF9;Q9UJU6-6 DBNL Drebrin-like protein yes no 0 0 0 2 0 1 31.18 31.243 2 1.2168E-05 6210 20230619_1881_Aki_TMTPro18x_K_F2 132.32 119.37 2882.8 1188.7 3934.2 4833.5 6543.7 10636 6161.4 8261.3 6746.3 5759.9 9567 11486 6202.9 8550.8 8687.3 2865.6 7960.1 9632.1 2665.4 1119.7 3959.7 4645.3 6604.4 10239 6257.2 8527.2 6940 6129.2 9552.4 11284 6574.1 8607.2 8717.8 3371.2 7634.8 9070.8 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3385500 31424 2620 29519 59093 47712 47712 1 9606 Homo sapiens -0.06760619494752973 YQEQHSVMCK Oxidation (M) 1324.554 0.55400598 1090 Q5QNY5;A0A0S2Z497;P40855;B7Z6I5;H0YJ60;H0YDY4;B7Z2P6 PEX19 Peroxisomal biogenesis factor 19 yes no 0 1 0 4.5 0.5 1 1 33.045 33.114 3 0.00079143 6829 20230619_1885_Aki_TMTPro18x_K_F5 93.442 74.985 15049 10148 16613 17687 21354 22888 16265 20198 23801 18308 22005 25697 21388 17582 20646 20388 27643 20464 13912 9356.8 16820 17296 21675 22676 16941 20760 23735 18834 22658 25465 21818 18547 21388 20452 26331 19462 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27128000 31425 1090 29520 59094;59095 47713 47713 660 1 9606 Homo sapiens -0.09528886325074382 YQEQHSVMCK Unmodified 1308.5591 0.55909136 1090 Q5QNY5;A0A0S2Z497;P40855;B7Z6I5;H0YJ60;H0YDY4;B7Z2P6 PEX19 Peroxisomal biogenesis factor 19 yes no 0 0 0 6 0 1 37.402 37.476 3 0.00040917 8540 20230619_1886_Aki_TMTPro18x_K_F6 107.06 81.396 44417 29168 42395 45898 53474 57693 43725 50789 56623 53069 65867 74846 60451 54808 59219 50740 85079 79596 41005 26859 43413 45102 54425 57265 45085 52410 57309 54170 66965 74254 61859 56997 61612 52697 81115 75315 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34198000 31426 1090 29520 59096 47714 47714 1 9606 Homo sapiens -0.08284582462442813 YQETFNVIER Unmodified 1297.6303 0.63026569 1433 M0R248;A0A384MR44;Q13011;M0QZW4;B4DVS4 ECH1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes no 0 0 0 5 0 1 51.107 51.182 2 0.0014442 14264 20230619_1885_Aki_TMTPro18x_K_F5 125.3 93.925 59593 49842 52342 61706 65110 65369 71962 72372 79169 80069 82889 80420 87482 75703 74987 87631 87267 101640 55056 45727 54024 61391 66767 66002 72371 73646 80413 80511 85047 81484 88560 78902 77224 88610 83477 96333 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130040000 31427 1433 29521 59097 47715 47715 1 9606 Homo sapiens -0.006644231617883634 YQEVDRR Unmodified 964.47264 0.47264284 4382 Q96MU7;Q96MU7-2 YTHDC1 YTH domain-containing protein 1 yes no 0 0 1 3 0.816 1 1 1 28.199 28.29 3 0.087818 4951 20230619_1882_Aki_TMTPro18x_K_F3 45.718 18.193 7604.8 5435.4 10045 10482 14998 13400 9344.7 11307 9202.2 10219 13048 15327 10694 9895.1 14161 7723.9 18207 11051 7045 5017.8 10072 10198 15002 13280 9758.9 11663 9544.2 10534 13127 15125 11163 10268 14522 8006.7 17331 10487 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19454000 31428 4382 29522 59098;59099;59100 47716;47717 47717 2 9606 Homo sapiens -0.011014579104767108 YQEVTNNLEFAK Unmodified 1454.7042 0.70415892 3890 Q14444-2;Q14444;G3V153;B3KXU8;E9PLA9;B4DSF8 CAPRIN1 Caprin-1 yes no 0 0 0 6.5 0.5 1 1 55.511 55.58 3 4.7455E-06 15979 20230619_1887_Aki_TMTPro18x_K_F7 141.13 119.9 157560 136430 158140 161040 172860 176700 188050 191850 194720 194050 189230 170270 196380 163010 193450 201330 180600 180970 145750 125100 160830 160880 178640 177890 188950 194950 197840 195240 194640 173790 200010 170430 196100 200560 172930 172100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 780980000 31429 3890 29523 59101;59102 47718 47718 1 9606 Homo sapiens -0.005004997901323804 YQFDPNLGIR Unmodified 1221.6142 0.6142217 1731 A0A804HJA4;J3KN16;Q5VYK3;B3KXF2 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 8 0 1 54.808 54.875 2 0.010098 15670 20230619_1888_Aki_TMTPro18x_K_F8 93.178 72.896 282480 250790 290380 314370 296320 357940 359480 283620 436640 304530 302570 342420 310960 296030 350880 338640 328230 369110 261400 230060 294640 312740 309310 356870 360860 295750 434690 308200 317530 344200 319260 309030 354790 341380 314550 350110 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 138220000 31430 1731 29524 59103 47719 47719 1 9606 Homo sapiens 0.012279153919735109 YQGDGIVEDEEETMENNEEK Oxidation (M) 2372.9438 0.94380943 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;Q9NYF8-4;H0YF14;H0YF63;B0AZU3;B7Z8J9 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 1 0 1 0 1 48.815 48.815 3 1.2019E-23 13841 20230619_1880_Aki_TMTPro18x_K_F1 193.06 185.79 16162 14421 14520 18405 17656 19150 19696 19852 18525 22779 24550 25826 23750 25195 19852 30557 26976 31413 14941 13231 14959 18264 18140 19325 19708 20312 19195 22948 24876 26068 24119 26270 20710 30635 25772 29811 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 58903000 31431 4629 29525 59104 47720 47720 2835 1 9606 Homo sapiens -0.18774472063796566 YQGDGIVEDEEETMENNEEK Unmodified 2356.9489 0.94889481 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;Q9NYF8-4;H0YF14;H0YF63;B0AZU3;B7Z8J9 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 0 1 0 1 54.718 54.718 3 0.010091 16337 20230619_1880_Aki_TMTPro18x_K_F1 56.748 53.029 9601 9428 8815.7 10579 9497.3 10426 11479 11349 10931 13192 11126 13055 13831 10203 14334 14877 16391 15107 8882.8 8636.7 9042.9 10589 9861.1 10579 11442 11580 11193 13220 11544 13158 14047 10874 14683 14885 15654 14351 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 239990000 31432 4629 29525 59105 47721 47721 1 9606 Homo sapiens -0.17530168201210472 YQGDGIVEDEEETMENNEEKK Unmodified 2485.0439 0.043857827 4629 Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;Q9NYF8-4;H0YF14;H0YF63;B0AZU3;B7Z8J9 BCLAF1 Bcl-2-associated transcription factor 1 yes no 0 0 1 1 0 1 52.356 52.356 3 0.028332 15320 20230619_1880_Aki_TMTPro18x_K_F1 49.528 42.879 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31433 4629 29526 59106 47722 47722 1 9606 Homo sapiens -0.13926234729979114 YQGGFLISR Unmodified 1039.5451 0.5450795 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B7Z1H4;B7Z1V9;H0YDG0 NPEPPS Puromycin-sensitive aminopeptidase yes no 0 0 0 3 0 1 50.677 50.748 2 0.055746 14457 20230619_1882_Aki_TMTPro18x_K_F3 66.299 27.523 281220 228970 303090 329190 285660 414650 360510 351710 402630 386680 391510 443730 450590 354430 397210 476230 490540 509440 260200 210430 306140 325150 300830 410980 360450 364610 407370 390690 405170 444800 455390 375150 410430 478190 468570 483450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 190600000 31434 2933 29527 59107 47723 47723 1 9606 Homo sapiens 0.026888761630971203 YQGVNLYIK Unmodified 1096.5917 0.59169534 1667 Q13310-3;Q13310-2;Q6IQ30;A0A7I2V4L7;Q13310;B1ANR0;A0A7I2V5W9;A0A7I2V598;H0Y5F5;H0YEU6;Q53GL4;Q3B867;Q147Y3 PABPC4 Polyadenylate-binding protein 4;Polyadenylate-binding protein no no 0 0 0 3 0 1 55.144 55.185 3 0.0011942 16421 20230619_1882_Aki_TMTPro18x_K_F3 99.802 69.232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31435 1667 29528 59108 47724 47724 1 9606 Homo sapiens 0.04726315994344077 YQGVNLYVK Unmodified 1082.576 0.57604528 566 P11940;A0A024R9C1;B4DZW4;H0YAR2;E7EQV3;A0A7I2YQ88;E7ERJ7;P11940-2;A0A087WTT1;B4DQX0;B3KT93;A0A7I2V4N4;A0A7I2YQE4;A0A024R9E2;Q4VXU2;A0A6Q8JFT6;H0YAP2;Q4VXU2-2;A0A6I8PLA1;A0A6I8PS38 PABPC1;PABPC1L Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 1-like yes no 0 0 0 2.5 0.5 1 1 52.727 52.773 2 3.9882E-06 15642 20230619_1881_Aki_TMTPro18x_K_F2 186.13 134.34 783510 690170 685350 713510 802510 1054800 864610 850630 1047300 372320 297230 228590 290950 225420 486050 329350 345330 227050 724080 632010 706580 723310 827800 1035700 873120 870140 1024600 399010 340010 239150 306570 238210 482130 324110 330950 217170 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 348360000 31436 566 29529 59109;59110 47725;47726 47725 2 9606 Homo sapiens 0.03806029477323136 YQHGLEFGK Unmodified 1077.5243 0.52434406 2127 A8K8X0;Q14CX7-2;Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit yes no 0 0 0 7.5 0.5 1 1 43.829 43.88 3 0.0020456 10860 20230619_1887_Aki_TMTPro18x_K_F7 81.017 59.024 65516 36789 62416 56404 54781 67279 70086 60950 76292 76471 78269 78546 73512 64238 64305 82904 80780 80642 60439 33893 63525 55485 57974 67022 69964 63137 77447 76519 79996 79158 74768 67711 66566 82830 77130 76619 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 86562000 31437 2127 29530 59111;59112 47727 47727 1 9606 Homo sapiens -0.011317142165808036 YQHLITNSFVECNR Unmodified 1779.8363 0.8362525 4741 Q9Y4X5;Q59FM8;H3BNB9 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes no 0 0 0 1 0 1 48.62 48.62 3 1.1593E-08 13800 20230619_1880_Aki_TMTPro18x_K_F1 152 121.04 37795 32507 39250 42704 41441 43711 47311 42392 48267 43017 47604 46042 53412 42002 44135 49717 53851 56179 34971 29838 39807 42296 42998 44097 47384 43440 49078 43545 49114 46487 53872 43895 45609 50180 51446 53282 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 74248000 31438 4741 29531 59113 47728 47728 1 9606 Homo sapiens -0.022472180448176005 YQHLMTINANNR Unmodified 1473.7147 0.7146808 4516 Q9H4L7;Q9H4L7-2;Q9H4L7-3 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 yes no 0 0 0 3 0 1 41.459 41.522 3 0.0022697 10256 20230619_1882_Aki_TMTPro18x_K_F3 53.769 37.878 64370 42942 63088 69418 70469 86110 80104 85648 100900 79594 89020 92852 100060 84426 79447 86369 98492 114410 59443 39555 64364 68108 72967 85726 80844 87340 101080 81210 92379 93370 100810 87515 82240 88308 94163 108310 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49596000 31439 4516 29532 59114 47729 47729 1 9606 Homo sapiens -0.003227956166256263 YQIDDKPNNQIR Unmodified 1502.7478 0.74775506 4001 Q9BUN6;Q53H77;Q53GN7;Q9NP92 MRPS30 28S ribosomal protein S30, mitochondrial yes no 0 0 1 6.5 0.5 1 1 41.076 41.157 3 8.8239E-07 9995 20230619_1886_Aki_TMTPro18x_K_F6 145.83 124.83 342390 249600 326160 379140 456930 499440 488530 454770 507100 466660 508670 491740 527670 430540 459180 468290 496510 450540 316260 229630 335060 373550 465010 494690 491080 467980 515550 471840 522530 496020 534540 448170 470220 469060 474380 428290 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 222820000 31440 4001 29533 59115;59116 47730;47731 47730 2 9606 Homo sapiens 0.016491097070456817 YQIDPDACFSAK Unmodified 1413.6235 0.62346575 1286 A0A1L1UHR1;P21796;B3KTS5;B4DEI3 VDAC1 Voltage-dependent anion-selective channel protein 1 yes no 0 0 0 5.5 1.12 1 1 1 1 54.25 54.306 3 9.4943E-05 15701 20230619_1886_Aki_TMTPro18x_K_F6 111.79 71.875 391590 424570 407330 425260 488080 517600 615550 646500 565720 543300 522480 557120 696250 580730 537810 607770 478810 534730 362950 388430 413950 431060 503450 519540 611610 648440 577630 554890 545960 565820 697310 599630 546810 606170 459080 508450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3627499999.9999995 31441 1286 29534 59117;59118;59119;59120 47732;47733 47733 2 9606 Homo sapiens -0.0668010410468014 YQIHIPLPPK Unmodified 1204.6968 0.69682911 1235 C9JX88;A0A140VK70;P35998;Q75L23;P35998-2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 4 0 1 53.826 53.841 3 0.022582 15746 20230619_1883_Aki_TMTPro18x_K_F4 60.518 43.945 53175 49638 49011 56667 56502 54667 56655 55389 59885 65417 64326 58670 61579 46707 56988 72676 61076 69598 49181 45486 50281 56633 58044 55487 57223 56813 61044 65348 65631 59498 62679 49979 58348 72386 58456 66106 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 150840000 31442 1235 29535 59121 47734 47734 1 9606 Homo sapiens 0.10266857190799783 YQILPLHSQIPR Unmodified 1463.8249 0.82488317 3811 Q08211 DHX9 ATP-dependent RNA helicase A yes yes 0 0 0 4.5 0.5 1 1 49.775 49.831 3 4.3164E-13 13643 20230619_1885_Aki_TMTPro18x_K_F5 196.67 163.26 186680 157470 174010 193980 174130 203670 213370 181650 208010 215220 200760 186010 231390 174810 229380 203830 204990 199860 172560 144450 177980 193000 181960 204710 212630 188100 212040 214840 207650 189790 234900 182360 231790 204240 196340 189890 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1565699999.9999998 31443 3811 29536 59122;59123 47735;47736 47736 2 9606 Homo sapiens 0.11152372714013836 YQLDPTASISAK Unmodified 1292.6612 0.66123147 62 A0A0A0MR02;A0A024QZT0;P45880;A0A024QZN9;P45880-2;P45880-1;B4DKM5 VDAC2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 6.67 1.37 1 1 2 2 52.881 52.946 2;3 9.9648E-24 14877 20230619_1887_Aki_TMTPro18x_K_F7 253.79 189.75 429990 423770 474960 516500 528850 571750 573740 585950 592660 596720 606010 571120 724670 577880 592730 602900 553140 549330 398450 388500 479840 514760 545920 574330 576550 597810 603510 601710 626070 581310 729130 597340 602910 602580 529600 522340 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3660999999.9999995 31444 62 29537 59124;59125;59126;59127;59128;59129 47737;47738 47737 2 9606 Homo sapiens 0.02660730152456381 YQLEIPENFTTR Unmodified 1509.7464 0.74635808 1853 P52701;A0A8V8TQJ0;P52701-3;A0A494C0M1;P52701-4;P52701-2;Q1L838;A0A8V8TQW9 MSH6;GTBP DNA mismatch repair protein Msh6 yes no 0 0 0 6.5 0.5 1 1 58.383 58.443 3 7.8317E-05 17441 20230619_1886_Aki_TMTPro18x_K_F6 113.99 71.244 118710 104720 105430 119710 100700 121170 117430 117210 128700 142970 135500 136390 150330 123810 136140 160350 150710 161920 109720 95977 108230 119700 105540 122340 117810 120720 130850 142890 139370 138350 152270 130100 139630 160560 144130 153730 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 208330000 31445 1853 29538 59130;59131 47739;47740 47739 2 9606 Homo sapiens 0.01187475618235112 YQLLQLRPAQR Unmodified 1384.7939 0.7939174 2297 Q9BXJ9;B2RBE5;A0A0B4J1W3;A0A8V8TQ34;B4E2T6;A0A8V8TPI7;Q58F05;Q9BXJ9-4;A0A8V8TQT7 NAA15;NARG1 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 1 8 0 1 47.729 47.788 3 6.3486E-05 12575 20230619_1888_Aki_TMTPro18x_K_F8 132.22 100.29 153530 132400 143860 148120 135650 172960 161960 145550 180630 98352 98594 86990 100700 84239 114830 108620 109180 92216 141940 121340 146880 148650 142470 172350 162280 149400 179420 101770 105090 88855 103420 88269 116170 107870 104400 87824 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 334490000 31446 2297 29539 59132 47741 47741 1 9606 Homo sapiens 0.11691219399790498 YQNAELR Unmodified 892.44028 0.44028008 1570 Q01433;A0A5F9UK94;B2RB47;Q01433-2;H0Y360;A0A804CCZ3;Q01433-5;Q01433-3;Q01433-4;A0A7P0Z4H6;H0YF16;A0A804H2H4;A0A590UK85 AMPD2 AMP deaminase 2 yes no 0 0 0 3.5 0.5 1 1 35.628 35.68 2 0.0074614 7857 20230619_1883_Aki_TMTPro18x_K_F4 125.01 67.905 79400 50026 72495 85681 98275 95895 102960 109640 110110 98777 138760 138480 128710 109890 115140 73087 157610 135360 73261 46128 74685 83682 100070 96476 103780 110750 112810 101590 140570 137720 131050 112420 119410 77676 150240 127980 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 104850000 31447 1570 29540 59133;59134 47742 47742 1 9606 Homo sapiens -0.010242453134878815 YQNYIMEGVK Unmodified 1243.5907 0.59070906 913 A0A096LNV3;A0A096LP02;Q9Y508-2;Q9Y508 RNF114 E3 ubiquitin-protein ligase RNF114 yes no 0 0 0 8 0 1 55.294 55.356 3 0.028963 15887 20230619_1888_Aki_TMTPro18x_K_F8 46.844 34.484 130100 115240 120300 140040 116200 145590 122070 131990 169230 135950 141260 133590 146480 132770 137410 162630 153280 151180 120290 105690 123090 139440 121430 146460 124230 135880 168530 137220 146420 135790 148990 138520 140900 162250 146490 143720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33340000 31448 913 29541 59135 47743 47743 1 9606 Homo sapiens -0.021342664368376063 YQPCLPSTQEDVINK Unmodified 1790.8509 0.85089951 2867;2868 E5KND5;Q96RP9;Q96RP9-2;E5KND7 GFM1 Elongation factor G, mitochondrial no no 0 0 0 5.5 0.5 1 1 53.364 53.438 3 8.5012E-08 15365 20230619_1886_Aki_TMTPro18x_K_F6 132.65 122.31 97036 76410 75708 92617 86486 97302 97915 103970 113090 107780 112950 115280 136760 100360 102590 129800 116810 124410 89543 70102 78953 92261 89371 98188 98534 105840 114360 108940 116920 116220 137100 105640 105860 129580 111680 118200 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 629200000 31449 2867;2868 29542 59136;59137 47744;47745 47745 2 9606 Homo sapiens -0.012891906873619519 YQPLASTASDNDFVTPEPR Unmodified 2106.9858 0.98581308 2356 B4E0B7;B3KMS0;Q15021;B3KY03 NCAPD2 Condensin complex subunit 1 yes no 0 0 0 4 0 1 54.024 54.04 3 6.8859E-15 15783 20230619_1883_Aki_TMTPro18x_K_F4 161.95 157.05 38016 30959 36834 40060 39832 54115 44119 49395 55572 41290 41510 43232 46248 41475 46440 45492 48122 50590 35142 28419 37596 39884 41352 53506 44590 50543 55369 42254 43480 43749 47083 43054 47307 45942 46044 47987 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 144430000 31450 2356 29543 59138 47746 47746 1 9606 Homo sapiens -0.023400390118695213 YQQELEEEIK Unmodified 1307.6245 0.62451161 4099 Q6DD88;F5H6I7;B4DXC4 ATL3 Atlastin-3 yes no 0 0 0 2 0 1 53.449 53.477 3 0.00058304 15944 20230619_1881_Aki_TMTPro18x_K_F2 83.081 52.75 49122 35425 51330 46671 40309 61504 53286 52314 68377 70538 72149 79461 74272 60320 61333 84040 74534 85813 45405 32540 51789 46405 43241 60805 53456 54558 68962 70582 73970 79597 75111 64116 63456 84095 71264 81445 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 105110000 31451 4099 29544 59139 47747 47747 1 9606 Homo sapiens -0.016995664640944597 YQQEVDR Unmodified 936.43011 0.43010932 2727;1036 P33176;M1VE91;V9HW29;C1PHA2;D3DRX6;B4DS27;Q9UFW7;O60282;A0A0G2JMZ6;A0A7I2V3N5;A1L179;A0A7I2V492;A0A7I2V581;Q57Z91;O60282-2;A0A7I2V352;A0A7I2YQQ7;Q59GB8 KIF5B;KIF5B-RET(NM_020630)_K24;R11;HEL-S-61;KIF5B-ALK;DKFZp566O183;KIF5C Kinesin-1 heavy chain;Kinesin-like protein;Kinesin heavy chain isoform 5C no no 0 0 0 2 0 1 32.653 32.713 2 0.034163 6778 20230619_1881_Aki_TMTPro18x_K_F2 93.374 54.582 10486 7693.5 20303 16781 27643 21944 21035 19689 13979 11236 20403 12630 10473 8404.8 27135 5288.7 13010 9196.2 9764.9 7116.1 19886 16257 27839 21750 21388 20047 14876 11847 20179 12639 11771 8652.1 26397 5656.2 12558 8707.2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 6512200 31452 2727;1036 29545 59140 47748 47748 1 9606 Homo sapiens -0.040648530387102255 YQQGDFGYCPR Unmodified 1389.5772 0.57718426 3202 P67870;Q5SRQ6;N0E4C7;A0A1U9X7J2;A0A7I2YQ78;Q5SRQ3;N0E472;A0A0G2JM12;N0E466 CSNK2B;CSNK2B-LY6G5B-1181;CSNK2B-LY6G5B--991 Casein kinase II subunit beta yes no 0 0 0 5.5 0.5 1 1 44.868 44.952 2 9.1193E-12 11654 20230619_1886_Aki_TMTPro18x_K_F6 225.67 182.59 161860 134460 146110 190260 147840 181880 169500 169920 198820 222430 231890 223730 264140 205890 203540 284920 349600 254980 149560 123540 150060 187320 154220 184200 170600 175870 202330 222000 237650 226610 265720 217190 216500 283110 332420 242840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 328360000 31453 3202 29546 59141;59142 47749 47749 1 9606 Homo sapiens -0.10202124216084485 YQQHLEQK Unmodified 1072.5302 0.53015772 3340 O94967-2;O94967;O94967-3;O94967-4;B4DHA1 WDR47 WD repeat-containing protein 47 yes no 0 0 0 5.5 0.5 1 1 35.037 35.107 3 0.001686 7657 20230619_1886_Aki_TMTPro18x_K_F6 103.55 91.321 26963 11658 33383 38691 44577 42180 33694 40245 39656 25987 42078 48447 37380 34954 41455 20258 45590 42704 24908 10913 33564 36832 45060 42301 34817 40869 40100 27720 42906 47663 38513 35726 42188 21926 43561 40333 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37604000 31454 3340 29547 59143;59144 47750 47750 1 9606 Homo sapiens -0.003206157049135072 YQQLFEDIR Unmodified 1210.5982 0.59823728 471 A0A3B3IU45;B4DLA6;B3KMX0;A0A024R7U6;P33991;A0A3B3IT92;E5RG31;A0A3B3IS57;A4FS09 MCM4 DNA replication licensing factor MCM4 yes no 0 0 0 5.5 0.5 1 1 58.991 59.05 2 6.6104E-06 17485 20230619_1885_Aki_TMTPro18x_K_F5 200.54 115.97 278060 195440 253890 277600 192020 282300 255680 251830 313730 366990 345210 314680 360240 298350 302090 371720 326490 355240 256710 179700 259210 273550 206760 284170 256010 262470 317830 363110 353080 321320 364340 312260 309960 371240 312350 337480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 782140000 31455 471 29548 59145;59146 47751;47752 47751 2 9606 Homo sapiens 0.0013620915508454345 YQQPFEDFR Unmodified 1228.5513 0.55128709 3477 P19174;P19174-2;Q4LE43;B4DMA3;Q9UFY1;V9GY71;V9GYH5 PLCG1;PLCG1 variant protein;DKFZp434N101 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1;Phosphoinositide phospholipase C yes no 0 0 0 4 0 1 51.272 51.299 2 0.0059213 14594 20230619_1883_Aki_TMTPro18x_K_F4 104.2 73.63 108300 101980 117300 106590 108260 129900 125620 97336 126420 152010 145030 157830 156560 127030 145010 167450 157180 159500 100300 93377 118220 107630 113660 128880 125670 103230 129640 150860 148530 158850 158830 134200 148450 167110 150290 151570 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 85716000 31456 3477 29549 59147 47753 47753 1 9606 Homo sapiens -0.0538465039608127 YQSAPSQAPGNTIER Unmodified 1617.7747 0.7746981 118 A0A024R101;Q86XZ4 SPATS2 Spermatogenesis-associated serine-rich protein 2 yes no 0 0 0 5 0 1 38.447 38.54 3 6.2059E-09 8919 20230619_1885_Aki_TMTPro18x_K_F5 138.68 115.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31457 118 29550 59148 47754 47754 1 9606 Homo sapiens -0.009478264724293695 YQSHDYAFSSVEK Unmodified 1559.6892 0.68923713 2686 Q584P1;B7Z3Y2;B7Z8A2;Q9UHG3-2;Q9UHG3;C9JGT6;C9JM55;C9K055;F8W8W4 PCYOX1 Prenylcysteine oxidase 1 yes no 0 0 0 4 0.816 1 1 1 45.22 45.285 3 9.822E-05 11700 20230619_1885_Aki_TMTPro18x_K_F5 101.75 88.876 68552 53986 57461 70468 65275 70874 70391 66391 87101 60538 71748 90202 66028 66412 79887 77210 79236 89514 63288 49567 59489 69790 67363 71532 71167 68030 87070 62440 74244 89374 68311 69804 80945 78116 75890 84853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 275040000 31458 2686 29551 59149;59150;59151 47755 47755 1 9606 Homo sapiens -0.06821991658148363 YQVEYDAYK Unmodified 1177.5292 0.52915466 2689 B7Z587;P17152 TMEM11 Transmembrane protein 11, mitochondrial yes no 0 0 0 5 0 1 49.747 49.823 2 0.0022895 13694 20230619_1885_Aki_TMTPro18x_K_F5 118.18 90.652 22882 17557 22716 23125 24402 28128 29029 29262 32784 29449 32146 29541 30656 29510 30049 33578 37371 32489 21149 16123 23123 22964 25347 28081 29114 29812 33146 29763 32932 30004 31339 30640 30988 33610 35652 30888 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 10544000 31459 2689 29552 59152 47756 47756 1 9606 Homo sapiens -0.05250874864486832 YQVGVHYELTEEEK Unmodified 1722.8101 0.81008055 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825;A0A7P0TB64;A0A7P0TAV5;A0A7P0T990;A0A804HHY6;A0A7P0T942;A0A2R8YGC7;A0A7P0T9S3;A0A7P0T934;A0A7P0T9Y3;A0A7P0TBC9 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 3.5 0.5 1 1 47.993 48.053 3 9.076E-12 13257 20230619_1882_Aki_TMTPro18x_K_F3 178.67 159.59 135290 112020 134730 148550 121800 129490 133400 138320 156130 183400 186750 185840 194530 160490 175520 208940 201170 220650 125100 102850 136780 146760 127840 132610 134630 141930 159120 182940 190490 187720 197360 169000 180420 209720 192370 209380 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 542750000 31460 3881 29553 59153;59154 47757 47757 1 9606 Homo sapiens -0.022412087352904564 YQVNVDGTVAAYR Unmodified 1454.7154 0.7153923 235 B2R8W4;A0A024R3C4;Q7Z4H8-3;Q7Z4H8-2;Q7Z4H8 KDELC2 KDEL motif-containing protein 2 yes no 0 0 0 7 0 1 49.435 49.52 2 1.7729E-12 13351 20230619_1887_Aki_TMTPro18x_K_F7 194.17 165.44 42461 22081 34254 40766 38196 39181 50028 56041 59151 48766 57211 57604 55878 49356 51220 65041 61579 66342 39110 20404 35584 39597 39683 40096 50035 55869 59610 49936 58731 57841 56876 52000 52818 65136 58851 62981 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 47821000 31461 235 29554 59155 47758 47758 1 9606 Homo sapiens 0.0062232230404788424 YQVSWSLDHK Unmodified 1261.6091 0.60913632 3625 P51571 SSR4 Translocon-associated protein subunit delta yes yes 0 0 0 8 0 1 49.97 50.045 3 0.040526 13559 20230619_1888_Aki_TMTPro18x_K_F8 49.025 26.979 40899 36669 43109 45832 43851 51484 50878 47607 57677 47213 49097 43201 44765 40562 43181 44017 46661 42807 37858 33636 43644 45604 45698 51534 51091 48902 57994 47642 50550 43966 45772 42103 44133 44115 44585 40685 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44437000 31462 3625 29555 59156 47759 47759 1 9606 Homo sapiens -0.011203884706446843 YQYAELGK Unmodified 970.476 0.47599688 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;O00507;Q6P468;Q59EZ5;Q86X58 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 0 0 0 7 0 1 48.426 48.513 2 0.017369 12903 20230619_1887_Aki_TMTPro18x_K_F7 83.948 51.477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31463 1867 29556 59157 47760 47760 1 9606 Homo sapiens -0.010422078564829462 YQYAIDEYYR Unmodified 1382.6143 0.61428128 3009 G3V583;Q8N128;Q8N128-2 FAM177A1 Protein FAM177A1 yes no 0 0 0 5 0 1 53.277 53.349 2 1.2607E-06 15190 20230619_1885_Aki_TMTPro18x_K_F5 134.23 120.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31464 3009 29557 59158 47761 47761 1 9606 Homo sapiens -0.061721293986693126 YQYGGLNSGR Unmodified 1113.5203 0.52032131 3705 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;B4DJ75;B7ZB67 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes no 0 0 0 1 0 1 39.973 39.973 2 1.3867E-06 10074 20230619_1880_Aki_TMTPro18x_K_F1 174.02 144.87 47866 30711 44785 55532 54702 74970 60827 55464 76139 64877 78227 89899 80386 64002 65445 81052 88314 95692 44177 28337 45992 54218 56343 73804 61420 58286 76730 65854 80315 89222 81256 67798 68162 81941 84329 90707 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37162000 31465 3705 29558 59159 47762 47762 1 9606 Homo sapiens -0.031898037103019306 YQYGGLNSGRPVTPPR Unmodified 1760.8958 0.89581629 3705 V9HW04;P62140;A0A8V8TQ71;A0A8V8TRH9;B4DJ75 HEL-S-80p;PPP1CB Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes no 0 0 1 5 0.816 1 1 1 40.906 40.98 3 3.9157E-11 9907 20230619_1885_Aki_TMTPro18x_K_F5 158.91 131.76 245780 195920 239620 265840 281150 305930 301820 310620 291040 342380 341910 335590 390880 317430 314770 336070 364460 394460 227190 179950 244730 263200 289180 306370 302850 317760 299470 343990 350480 340340 393650 329230 324270 340640 348440 373930 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 723590000 31466 3705 29559 59160;59161;59162 47763;47764 47764 2 9606 Homo sapiens 0.04580420960860465 YRAPQGCSGVDECAR Unmodified 1724.7359 0.73588652 2599 B4DV94;B4E1J0;B4E0K4;Q96AQ6-2;Q96AQ6 PBXIP1 Pre-B-cell leukemia transcription factor-interacting protein 1 yes no 0 0 1 4.5 0.5 1 1 32.883 32.953 3 0.00014468 6774 20230619_1885_Aki_TMTPro18x_K_F5 95.195 90.727 4364.6 2805.1 3744.4 5076.5 11235 8568.3 7938.3 7595 8820.4 6155.2 6007.7 7593.5 5791.6 5132 6019.9 5907.5 8244.5 6989.7 4025.7 2588.3 3972.9 4978.8 10960 8382 8212.2 7785 8822.7 6345.1 6299.4 7553.2 5934.7 5415.4 6238.7 5985.3 7858.1 6631.9 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19692000 31467 2599 29560 59163;59164 47765 47765 1 9606 Homo sapiens -0.0974919837010475 YRCELLYEGPPDDEAAMGIK Oxidation (M) 2342.0559 0.055883259 3447 P13639;Q8TA90;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 1 1 3.33 1.25 1 1 1 53.204 53.258 3 5.6806E-11 15144 20230619_1885_Aki_TMTPro18x_K_F5 125.28 116.23 138770 129460 127060 133610 132750 120660 125980 136690 125240 167050 168750 142500 177200 147430 148420 199140 174010 175710 128340 118520 130110 134530 137060 123510 127510 139320 129580 166360 171260 146120 179190 154660 153130 197820 166250 167140 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 317120000 31468 3447 29561 59165;59166;59167 47766;47767;47768;47769 47769 2085 4 9606 Homo sapiens -0.061462447299163614 YRCELLYEGPPDDEAAMGIK Unmodified 2326.061 0.060968637 3447 P13639;Q8TA90;Q6PK56;B4DRE8;B4DMC6 EEF2 Elongation factor 2 yes no 0 0 1 3.5 1.12 1 1 1 1 56.709 56.747 3 1.3047E-16 16545 20230619_1885_Aki_TMTPro18x_K_F5 166.29 157.97 186200 164130 199490 173910 131250 158470 173250 176610 165980 249150 211280 210540 261310 190680 205100 280260 260990 270340 172360 150330 200360 174810 142870 161900 172230 181080 171760 246540 216800 214850 262260 202280 213050 279380 249240 256840 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1021699999.9999999 31469 3447 29561 59168;59169;59170;59171 47770;47771;47772;47773;47774 47774 5 9606 Homo sapiens -0.04901940867330268 YRDAIAEIR Unmodified 1105.588 0.58800695 1775;3977 A0A8I5KVF8;Q6MZM4;Q6MZP3;Q8N3U4;Q8N3U4-2;B2R8Y6;Q6AI02;Q6MZM3;B1AMT4;A0A8I5KUG8;Q68DW7;Q4LE48;Q8WVM7-2;Q8WVM7 DKFZp686P16143;DKFZp686I05169;STAG2;DKFZp686P168;DKFZp686C21148;DKFZp781D1416;STAG1 variant protein;STAG1 Cohesin subunit SA-2;Cohesin subunit SA-1 no no 0 0 1 6 0 1 41.269 41.363 3 0.0010659 10111 20230619_1886_Aki_TMTPro18x_K_F6 103.22 43.421 123040 104640 113910 124520 124310 134030 133260 131480 141540 147120 143450 147720 160170 131760 146270 169280 161270 160590 113730 95953 116690 124260 128530 134780 134110 134920 143880 147850 147870 149420 162260 138440 149930 168960 154150 152630 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 140060000 31470 1775;3977 29562 59172 47775 47775 1 9606 Homo sapiens 0.03943646220500341 YRDPTTVTTLR Unmodified 1321.699 0.69901396 1204 A0A140VJT0;P63151;P63151-2;Q56VW8;A0A590UJY3 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B yes no 0 0 1 1.5 0.5 1 1 39.281 39.314 3 7.798E-09 9764 20230619_1880_Aki_TMTPro18x_K_F1 149.23 107.25 156460 125240 161990 174070 167520 189900 187680 181160 196760 200070 233250 239660 238660 179650 207090 231590 228300 242580 144690 115060 164270 171940 174100 190580 188390 186230 201380 202340 237860 239490 241730 190130 212450 232440 218330 230230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 500810000 31471 1204 29563 59173;59174 47776 47776 1 9606 Homo sapiens 0.05103241137931036 YRDQFTDQQK Unmodified 1327.6157 0.61567826 2174 E9PDF6;B0I1S9;O43795-2;O43795;B3KQI2;H7C2Y7 MYO1B Unconventional myosin-Ib yes no 0 0 1 5.5 0.5 1 1 38.458 38.545 3 2.1509E-06 8913 20230619_1886_Aki_TMTPro18x_K_F6 145.23 80.929 302720 229070 253970 307670 364250 350600 339970 351050 421340 361430 359660 349500 428900 336010 302570 459350 459770 404430 279420 210420 263980 304710 368800 351360 346600 358790 422200 364500 374710 355180 429550 353640 319410 456060 438000 384910 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 203020000 31472 2174 29564 59175;59176 47777;47778;47779 47779 3 9606 Homo sapiens -0.03502495309930964 YRDQIPSPGLMVFPK Oxidation (M) 1762.9076 0.90762652 3652 P54709;C9JA36;D3DNF9;P54709-2;C9JXZ1 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes no 0 1 1 3 0 1 54.739 54.785 3 9.5255E-05 16261 20230619_1882_Aki_TMTPro18x_K_F3 96.414 78.713 46090 36941 44352 46796 41393 49821 54047 49655 61702 61914 64187 68922 71044 54883 56974 85689 71305 84619 42599 33904 45181 46491 43607 50135 53989 51082 62530 62124 66058 69203 71599 58725 59140 85453 68177 80334 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 93429000 31473 3652 29565 59177 47780 47780 2347 1 9606 Homo sapiens 0.056689016598056696 YRDQIPSPGLMVFPK Unmodified 1746.9127 0.9127119 3652 P54709;C9JA36;D3DNF9;P54709-2;C9JXZ1 ATP1B3 Sodium/potassium-transporting ATPase subunit beta-3 yes no 0 0 1 4 0 1 58.406 58.408 4 0.049276 17687 20230619_1883_Aki_TMTPro18x_K_F4 55.66 37.645 30164 21488 30648 30335 23183 34164 31946 31929 38868 38979 38295 42000 43397 34491 38164 46880 45022 50111 27873 19754 30991 29954 24981 34175 31926 32961 39188 39107 39564 42243 43873 36497 39328 47061 43046 47543 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 24939000 31474 3652 29565 59178 47781 47781 1 9606 Homo sapiens 0.06913205522437238 YRDSHEPTYGIY Unmodified 1499.6681 0.66810776 2259 B2R894;Q96DV4;Q96DV4-2 MRPL38 39S ribosomal protein L38, mitochondrial yes no 0 0 1 4 0 1 42.317 42.36 3 0.0027116 10538 20230619_1883_Aki_TMTPro18x_K_F4 68.676 55.013 42757 32513 42846 42994 43922 52293 47335 54868 55921 46910 49081 45343 46309 40118 46011 40008 48648 45052 39519 29860 43539 42685 45668 52209 47816 55626 56183 47793 50537 45927 47345 41559 46902 40515 46495 42750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41778000 31475 2259 29566 59179 47782 47782 1 9606 Homo sapiens -0.06173956966949845 YRDVAECGPQQELDLNSPR Unmodified 2246.0386 0.038593711 1140 A0A0S2Z5P5;Q9BTE3-2;Q9BTE3;A0A0S2Z614 MCMBP Mini-chromosome maintenance complex-binding protein yes no 0 0 1 3.5 0.5 1 1 46.202 46.263 3 3.3474E-49 12293 20230619_1883_Aki_TMTPro18x_K_F4 275.99 261.52 234960 186890 234230 226450 199050 249940 257750 231720 251000 311670 311270 289280 315570 274250 274570 332710 303910 282860 217210 171460 237480 225800 211270 250490 256330 240170 258730 309940 316560 294250 320010 286400 281860 330490 290350 269270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 294510000 31476 1140 29567 59180;59181 47783;47784 47784 2 9606 Homo sapiens -0.03458404220691591 YREQEAIR Unmodified 1063.5411 0.54105675 2478 C9J7E8;B4DG30;Q9UL63;C9JVL5;C9JXB0 MKLN1 Muskelin yes no 0 0 1 3.5 0.5 1 1 29.787 29.867 3 0.0069577 5535 20230619_1883_Aki_TMTPro18x_K_F4 84.213 45.065 71983 46778 64475 74731 83330 85678 77196 81347 103670 85199 95136 90020 90854 78121 75394 80107 104930 80196 66418 43087 66456 73265 84914 85684 79004 83492 103720 86087 97759 90761 92165 81074 78581 80478 99940 76260 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22496000 31477 2478 29568 59182;59183 47785;47786 47786 2 9606 Homo sapiens 0.011827866693693068 YREQEYR Unmodified 1042.4832 0.48320752 1663 A0A7I2V4F2;A0A7I2V629;Q2NKQ6;E9PG73;A0A7I2V5Q5;Q13427 PPIG Peptidyl-prolyl cis-trans isomerase G yes no 0 0 1 3.5 0.5 1 1 27.599 27.696 3 0.010443 4784 20230619_1882_Aki_TMTPro18x_K_F3 96.492 72.337 40326 21892 34603 39978 50411 46616 47331 49500 52905 43418 48663 47878 50516 45158 43533 32782 64458 50230 37166 20220 35889 38944 50973 46690 48065 50195 53392 44354 50200 48284 51204 46037 45473 34162 61372 47576 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 27663000 31478 1663 29569 59184;59185 47787 47787 1 9606 Homo sapiens -0.03633475256060592 YREVQLPDR Unmodified 1174.6095 0.60947067 1507 P14735;A0A7I2V610;A0A3B3ISG5;A0A7I2V2P6;A0A7I2V3E3;A0A7I2YQV5;Q59GA5;P14735-2;B3KSB8;B7Z7W6;A0A7I2V3K9;A0A7I2V4Q3 IDE Insulin-degrading enzyme yes no 0 0 1 6 0 1 38.522 38.604 3 0.0019942 8954 20230619_1886_Aki_TMTPro18x_K_F6 94.692 60.806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31479 1507 29570 59186 47788 47788 1 9606 Homo sapiens 0.02915031249222011 YREWHHFLVVNMK Unmodified 1757.8824 0.88241483 2861 D9IAI1;P30086;A0A0K0K1J6;B4DRT4 HEL-S-34;PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 1 5.5 0.5 1 1 50.653 50.73 5 0.00063483 14193 20230619_1886_Aki_TMTPro18x_K_F6 94.688 80.724 46140 36580 45417 46079 17491 29213 29481 22122 63518 48934 41108 71491 77497 72920 78633 70261 57560 88472 42651 33572 45778 45533 20856 30652 30083 23888 61882 48784 45055 71490 78027 75013 78737 71700 55491 83725 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 71004000 31480 2861 29571 59187;59188 47789;47790 47790 2 9606 Homo sapiens 0.033788916479124964 YRFEIAAEK Unmodified 1125.5819 0.58185893 42 A0A024QZK4;Q96FC7;Q96FC7-2 PHYHIPL Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 1 7.5 0.5 1 1 46.875 46.943 3 0.00063729 12251 20230619_1888_Aki_TMTPro18x_K_F8 113.69 78.879 390030 328250 378640 322840 119400 130440 278230 279930 293420 427050 445150 418930 454250 357790 402100 486490 415640 410530 360630 300520 381280 324550 148790 150270 272310 279780 304420 423010 449770 423710 460540 377910 411020 482330 397510 390740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 414760000 31481 42 29572 59189;59190 47791 47791 1 9606 Homo sapiens 0.024091279889717043 YRGDTSQAADDSASTTGSR Unmodified 1944.8409 0.84093976 4072 Q5UW39;Q9Y2K1-2;Q9Y2K1 ZBTB1 Zinc finger and BTB domain-containing protein 1 yes no 0 0 1 2 0 1 29.856 29.925 3 4.3085E-07 5696 20230619_1881_Aki_TMTPro18x_K_F2 104.86 96.039 5236.9 2654.4 3680.7 4052.1 5666.6 6453.5 5918.4 5116.8 7751.2 3449.7 6064.5 7589.4 8119 5078 5676.8 3232.6 7687 6993 4819 2446.8 3901.9 4005.5 5744 6309.3 6002.7 5278.2 7708.3 3710.1 6399 7423.7 8094.1 5234.3 5911.3 3497.1 7330.6 6604.7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12338000 31482 4072 29573 59191 47792 47792 1 9606 Homo sapiens -0.0936870715902387 YRGDYDR Unmodified 943.41479 0.41479361 3957 Q1KMD3;H3BQZ7 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 0 0 1 3 0.816 1 1 1 27.845 27.935 3 0.041911 4881 20230619_1882_Aki_TMTPro18x_K_F3 71.342 52.612 86308 40372 90775 99709 137390 120530 116540 131400 139910 93560 138130 157430 125770 123620 127490 66332 164940 138880 79628 37517 92563 95986 138220 120490 119450 132440 140940 98564 141410 155620 128980 125590 131310 71869 157270 131240 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 82413000 31483 3957 29574 59192;59193;59194 47793;47794 47794 2 9606 Homo sapiens -0.0591771983590661 YRGQYNTYPIK Unmodified 1401.7041 0.70409934 1833 P61619;A0A8V8TMZ5;B4DR61;B3KNF6;C9JXC6;A0A8V8TMZ3;P61619-3 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 yes no 0 0 1 4 0 1 42.917 42.96 3 0.0022143 10793 20230619_1883_Aki_TMTPro18x_K_F4 84.687 50.003 129990 126910 132990 111420 224170 267550 177960 179410 275980 72066 79861 57587 57424 43788 105450 37179 49600 39689 120360 116030 136130 115900 224740 256650 184920 186340 267140 78639 90098 58752 61601 45318 102920 37844 47928 37706 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70169000 31484 1833 29575 59195 47795 47795 1 9606 Homo sapiens 0.01931545000547885 YRLEALK Unmodified 891.5178 0.51780212 2082 A8K5Y7;Q9HAV4;E2QRM3 XPO5 Exportin-5 yes no 0 0 1 2 0 1 44.743 44.826 3 0.026198 12068 20230619_1881_Aki_TMTPro18x_K_F2 77.923 13.165 250430 236100 224730 224300 306430 334390 288980 280680 355190 28325 47347 50947 54588 44619 86482 48867 60579 53731 231590 216000 231670 229080 311480 328620 294130 283720 344750 43489 63511 50738 57131 46454 85735 49436 58165 51007 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 160570000 31485 2082 29576 59196 47796 47796 1 9606 Homo sapiens 0.06770392622695454 YRLPVATR Unmodified 974.56615 0.56614929 4736 Q9Y4C2-2;Q9Y4C2;B4DST7 TCAF1 TRPM8 channel-associated factor 1 yes no 0 0 1 6 0.816 1 1 1 38.66 38.739 3 0.0018905 9005 20230619_1886_Aki_TMTPro18x_K_F6 114.99 67.906 79763 69200 79502 69481 70754 89662 83277 88392 104140 89652 83550 70029 83954 77813 73477 91606 85054 68295 73780 63357 80605 70484 74642 89107 83905 90365 104060 89988 86606 72312 85238 80692 75635 90493 81152 65175 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 98988000 31486 4736 29577 59197;59198;59199 47797 47797 1 9606 Homo sapiens 0.07784886262595592 YRNPSNCYGEESNAVCEK Unmodified 2175.895 0.89496594 2768 CON__ENSEMBL:ENSBTAP00000024146 yes yes 0 0 1 4 0 1 39.885 39.927 3 2.7945E-09 9526 20230619_1883_Aki_TMTPro18x_K_F4 125.18 116.57 + 10541 15649 18800 11454 49105 72487 32414 36391 50576 17375 33449 44473 19936 28963 28127 22243 35936 53000 9859.5 14275 18853 12700 48320 67780 34179 39098 49683 19494 34611 43362 21267 30003 28862 24194 34426 49951 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 27372000 31487 2768 29578 59200 47798 47798 1 9606 Homo sapiens -0.14594574323291454 YRPGTVALR Unmodified 1031.5876 0.58761301 2210;3750;4066 B4E380;K7EK07;B2R4P9;P84243;K7EMV3;A0A590UJJ6;B4DEB1;A8K4Y7;B2R6Y1;A0A1X8XL64;K7ES00;Q6TXQ4;K7EP01;Q6NXT2;Q71DI3;Q16695;P68431;Q5TEC6 H3F3B;H3F3A;H3F3C;HIST2H3A;HIST3H3;HIST1H3A;HIST2H3PS2 Histone H3;Histone H3.3;Histone H3.3C;Histone H3.2;Histone H3.1t;Histone H3.1 no no 0 0 1 5 2 1 1 1 1 1 1 1 35.961 36.013 3 6.1199E-05 7960 20230619_1882_Aki_TMTPro18x_K_F3 145.9 109.52 5251900 4301600 4673100 5019300 4951900 5559500 5636700 5479200 5772900 4884200 5408000 5227500 5768700 4917500 5264900 5506700 5895700 5295200 4851900 3944400 4801900 5018100 5141100 5579200 5647700 5588000 5856100 4980000 5581000 5283300 5852900 5113400 5398400 5512600 5630700 5033900 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 164830000000 31488 2210;3750;4066 29579 59201;59202;59203;59204;59205;59206;59207 47799;47800;47801;47802;47803;47804;47805;47806 47800 8 9606 Homo sapiens 0.07308271291321944 YRPLFDYFLK Unmodified 1360.718 0.71795849 1736 P41252;Q59G75;A0A804HJN6;A0A0A0MSX9;Q7Z3U5;A0A804HL54;A0A804HHW9;Q7Z355;J3KR24;A0A804HJ36;A0A804HIV9;Q6P0M4;A0A804HK69;A0A804HKU1;A0A804HIG2 IARS;DKFZp686L0869;DKFZp686L17145 Isoleucine--tRNA ligase, cytoplasmic yes no 0 0 1 6 0 1 62.257 62.308 3 0.0012508 19130 20230619_1886_Aki_TMTPro18x_K_F6 101.95 41.521 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31489 1736 29580 59208 47807 47807 1 9606 Homo sapiens 0.052028224996320205 YRPSMEGYR Oxidation (M) 1173.5237 0.52369213 1594 O60716;H0YC95;O60716-3;O60716-2;Q68DU0;C9JZR2;A0A669KB05;O60716-5;O60716-11;O60716-10;O60716-9;O60716-17;Q96FS1;O60716-21;O60716-19;O60716-13;O60716-18;O60716-6;O60716-8;O60716-4;O60716-7;A0A669KB62;O60716-20;O60716-22;O60716-23;O60716-16;O60716-24;O60716-12;O60716-15;O60716-14 CTNND1;DKFZp781O2021 Catenin delta-1 yes no 0 1 1 7 0.816 1 1 1 30.47 30.52 3 0.0092885 5849 20230619_1888_Aki_TMTPro18x_K_F8 72.325 48.103 24928 17520 24665 21864 33888 38251 27603 29989 32699 7863.3 10737 7962.7 9452.5 7249.6 14460 7833.3 11411 9301.1 23027 16086 25199 21938 34317 37232 28346 30597 32071 9185.9 11987 8086.3 9929.5 7539.4 14410 7965.9 10933 8826.4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59595000 31490 1594 29581 59209;59210;59211 47808 47808 1039 1 9606 Homo sapiens -0.05612876927943944 YRQDPQLGR Unmodified 1131.5785 0.57850489 1132 A0A0S2Z5K6;A0A0S2Z6B4;D6REA1;Q9H173 SIL1 Nucleotide exchange factor SIL1 yes no 0 0 1 6.5 0.5 1 1 31.392 31.458 3 0.0012383 5884 20230619_1887_Aki_TMTPro18x_K_F7 99.013 64.935 27823 21001 28874 25133 40962 32904 31605 40360 39423 28320 35612 36879 32122 25745 36534 29420 40873 32467 25723 19268 29384 25168 41252 32882 32673 40356 39535 29522 36583 36676 33101 27121 37268 29702 39007 30836 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 14881000 31491 1132 29582 59212;59213 47809 47809 1 9606 Homo sapiens 0.01797877934995995 YRQTTQDAPEEVR Unmodified 1591.759 0.75904803 4636 Q9P013;A0A024R3B4;A0A024R3C8 CWC15;HSPC148 Spliceosome-associated protein CWC15 homolog yes no 0 0 1 2.5 0.5 1 1 32.482 32.548 3 6.779E-06 6694 20230619_1881_Aki_TMTPro18x_K_F2 126.09 112.95 14829 17606 13041 10431 20931 18435 15955 19327 17480 16457 16144 14103 15989 11684 20222 19679 22360 14160 13737 16050 13493 11265 20952 18090 16430 19579 17679 16709 16618 14363 16518 12557 20600 19340 21317 13538 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 21910000 31492 4636 29583 59214;59215 47810 47810 1 9606 Homo sapiens -0.013161129895024715 YRTEAHQDVVGR Unmodified 1429.7062 0.7062246 4491;3802 Q05CW7;E9PMU0;Q9H0A0;Q9H0A0-2 NAT10 N-acetyltransferase 10 no no 0 0 1 5 0.816 1 1 1 26.747 26.804 4 1.9284E-05 5167 20230619_1885_Aki_TMTPro18x_K_F5 137.59 90.299 72290 50159 64377 73082 96349 94436 79445 88226 107220 89734 112110 107500 95649 81107 86238 91666 116010 108090 66721 46134 66569 72163 97071 93732 81952 90562 107780 91169 114010 107440 97720 85107 89527 92853 110650 102520 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 192780000 31493 3802;4491 29584 59216;59217;59218 47811;47812 47812 2 9606 Homo sapiens 0.00855973738339344 YRVPDVLVADPPIAR Unmodified 1679.9359 0.93589019 3900;2497 Q14697-2;V9HWJ0;B4DJ30;Q14697;F5H6X6;B4DSM6;A0A024R592 GANAB;HEL-S-164nA Neutral alpha-glucosidase AB no no 0 0 1 1.5 0.5 1 1 54.53 54.542 3 2.515E-05 16120 20230619_1880_Aki_TMTPro18x_K_F1 106.33 88.198 63001 59925 60570 69648 66108 79057 70160 71701 81716 78720 73698 79593 97155 78260 74794 93706 90367 94435 58296 54918 61878 69658 68402 79056 70866 73942 82321 79230 77045 80721 97336 81615 77412 93903 86340 89672 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2031999999.9999998 31494 3900;2497 29585 59219;59220 47813 47813 1 9606 Homo sapiens 0.12311967631444531 YSAVLDAVIASAGLLR Unmodified 1617.909 0.90900673 2309 B2RD09;Q96P11-2;Q96P11;Q96P11-4;Q96P11-5 NSUN5 Probable 28S rRNA (cytosine-C(5))-methyltransferase yes no 0 0 0 6 0 1 67.243 67.286 3 0.024578 21268 20230619_1886_Aki_TMTPro18x_K_F6 49.595 34.393 3795.4 3147.1 1726.4 3195.2 3050.5 3484.4 3601.4 3950.6 3533.6 3758.6 4058.6 3574.8 3304.1 3010 4984.6 4621.6 3683.4 3365.6 3494 2882.1 1955.5 3226.6 3084 3513 3595.7 3996.8 3624.6 3801.2 4106.9 3622.9 3476 3205.8 4965.5 4549.7 3534.6 3211.1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2719600 31495 2309 29586 59221 47814 47814 1 9606 Homo sapiens 0.12476859020262054 YSCFALFVK Unmodified 1133.558 0.55795237 3758 P78527;P78527-2;B4DL41 PRKDC DNA-dependent protein kinase catalytic subunit yes no 0 0 0 5 0 1 62.469 62.516 3 0.028005 19060 20230619_1885_Aki_TMTPro18x_K_F5 59.153 43.581 95641 75389 84073 77730 72799 80436 85464 86708 104750 79845 62497 65938 81964 52393 76597 91280 76576 74686 88328 69064 86152 78421 76907 81313 86035 87953 103920 80668 67001 67141 82687 56618 78062 90121 73254 71120 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97051000 31496 3758 29587 59222 47815 47815 1 9606 Homo sapiens -0.003484287690525889 YSCIDDSAFER Unmodified 1361.5558 0.55578012 843 A0A087WWZ2;B7Z5U5;Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 yes no 0 0 0 2 0 1 48.591 48.656 2 0.0053188 13809 20230619_1881_Aki_TMTPro18x_K_F2 87.568 79.969 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31497 843 29588 59223 47816 47816 1 9606 Homo sapiens -0.1105355403547037 YSCLVAGPHQR Unmodified 1286.619 0.6189895 3966 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 0 0 0 2 0 1 37.769 37.832 3 0.0053994 8825 20230619_1881_Aki_TMTPro18x_K_F2 80.737 64.847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31498 3966 29589 59224 47817 47817 1 9606 Homo sapiens -0.012855237369194583 YSDASDDSFSEPR Unmodified 1474.5848 0.58483164 701 Q9NRF8;A0A024RC00;Q9H6Q0 CTPS2 CTP synthase 2;CTP synthase yes no 0 0 0 1 0 1 42.574 42.574 2 0.0062045 11219 20230619_1880_Aki_TMTPro18x_K_F1 102.53 91.779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31499 701 29590 59225 47818 47818 1 9606 Homo sapiens -0.13347738205470705 YSDESGNMDFDNFISCLVR Unmodified 2267.9463 0.94633281 1009 A0A0C4DGQ5;P04632;K7EKD8;K7ELJ7;K7EMQ1 CAPNS1 Calpain small subunit 1 yes no 0 0 0 5.5 0.5 1 1 65.218 65.262 3 6.6743E-11 20276 20230619_1885_Aki_TMTPro18x_K_F5 141.6 140.35 10154 8916.6 8489.2 11140 10029 12401 11224 10968 13029 10084 14799 12804 14887 14605 12851 14997 16234 16998 9380.5 8179.7 8803.9 11079 10344 12407 11302 11285 13223 10333 15089 12956 15110 15020 13302 15170 15505 16121 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31707000 31500 1009 29591 59226;59227 47819 47819 1 9606 Homo sapiens -0.13692250349185997 YSDFEWLR Unmodified 1114.5084 0.50835964 3277 O60493;O60493-4;O60493-3 SNX3 Sorting nexin-3 yes no 0 0 0 6 0 1 60.47 60.528 2 0.0019754 18338 20230619_1886_Aki_TMTPro18x_K_F6 134.08 114.81 157450 133270 152440 144050 132150 168810 166810 159810 171190 180960 168170 162030 206560 154870 182070 210130 179980 191180 145580 122110 154960 145000 139970 168610 166350 164440 174150 181170 174350 165190 208280 163010 185610 209130 172300 181740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 204270000 31501 3277 29592 59228 47820 47820 1 9606 Homo sapiens -0.04431420453488499 YSDIDIILLK Unmodified 1191.6751 0.67509062 629 A0A024RAM0;Q92973-2;Q92973;A0A7P0TBF0;A0A7P0Z4D3;Q92973-3;A0A7P0T944;A0A7P0T9C0 TNPO1 Transportin-1 yes no 0 0 0 7 0 1 63.581 63.613 3 0.00015171 19472 20230619_1887_Aki_TMTPro18x_K_F7 114.5 87.167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31502 629 29593 59229 47821 47821 1 9606 Homo sapiens 0.08692007651575295 YSDIEPSTEGEVIFR Unmodified 1740.8206 0.82064524 3015 G3XAI2;P07942;A0A7I2V4J9;A0A7I2V5X5;A0A7I2V3I5;A0A7I2V2T9;A0A7I2V3J7;A0A7I2V682;A0A7I2V407;A0A7I2V2J0;A0A7I2V5R0;E7EPA6;A0A7I2V2R2;A0A7I2V5T9;C9J296 LAMB1 Laminin subunit beta-1 yes no 0 0 0 2.5 0.5 1 1 56.933 56.957 3 3.5521E-07 17369 20230619_1881_Aki_TMTPro18x_K_F2 121.18 107.22 44741 36042 41537 49752 42493 51679 50969 51734 60517 47355 46857 49620 62625 45090 53885 66748 54245 54556 41342 33109 42535 49123 44344 52087 51184 52736 60543 48187 49431 50160 62950 47822 55039 66006 51900 51946 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 97432000 31503 3015 29594 59230;59231 47822 47822 1 9606 Homo sapiens -0.020132260808850333 YSDLQNLAK Unmodified 1050.5346 0.53457439 2039 A8K4B4;Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;Q9BXS6-7;H0YKA7 NUSAP1 Nucleolar and spindle-associated protein 1 yes no 0 0 0 8 0 1 51.262 51.34 2 0.051356 14092 20230619_1888_Aki_TMTPro18x_K_F8 70.552 45.657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31504 2039 29595 59232 47823 47823 1 9606 Homo sapiens 0.011328487179980584 YSDLTTLVAFPSSSVYPTK Unmodified 2075.0463 0.046288076 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 3 0 1 63.615 63.646 3 0.005404 19972 20230619_1882_Aki_TMTPro18x_K_F3 65.225 54.567 63395 55497 61926 53576 58096 66575 49090 57219 72685 73779 81925 75139 81964 73425 63792 100690 84415 101330 58634 50793 62904 54489 60482 66155 50816 59510 73098 73740 83538 76242 82831 77227 66541 100660 80685 96172 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132270000 31505 1104 29596 59233 47824;47825 47824 2 9606 Homo sapiens 0.05176678318503036 YSEEANNLIEECEQAER Unmodified 2082.88 0.88002738 4359 Q96HE7;G3V5B3;G3V3E6 ERO1L ERO1-like protein alpha yes no 0 0 0 1 0 1 53.8 53.8 3 9.8282E-19 15896 20230619_1880_Aki_TMTPro18x_K_F1 186.43 167.67 21346 17965 24064 24645 19349 22485 20337 24253 23705 33995 31269 30157 31437 26644 27153 37967 34055 31512 19762 16499 24149 24312 20504 22937 20585 24904 24310 33693 31721 30678 31880 28193 28127 37578 32499 30008 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 226690000 31506 4359 29597 59234 47826 47826 1 9606 Homo sapiens -0.11809742919604105 YSEEGVYNVQYSFIK Unmodified 1824.857 0.85703074 4596 Q9NUJ1-2;Q9NUJ1 ABHD10 Mycophenolic acid acyl-glucuronide esterase, mitochondrial yes no 0 0 0 7.5 0.5 1 1 61.16 61.196 3 6.7243E-05 18326 20230619_1887_Aki_TMTPro18x_K_F7 96.135 77.771 163040 225630 259110 190860 505690 598840 348010 353120 469650 263040 267450 317620 213990 247270 290260 272830 347820 446020 152150 206040 258610 201010 501810 568900 363520 374880 463080 272960 282050 317440 224390 258710 296920 283430 332910 421430 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 279070000 31507 4596 29598 59235;59236 47827;47828 47827 2 9606 Homo sapiens -0.022403491841487266 YSEEVLAVFK Unmodified 1183.6125 0.61249036 4349 Q96FV9;Q96FV9-2;R4GN58 THOC1 THO complex subunit 1 yes no 0 0 0 7 0 1 62.39 62.425 3 0.065636 18922 20230619_1887_Aki_TMTPro18x_K_F7 42.743 8.2111 122070 109130 123010 118060 120760 138280 132660 135920 140940 152280 132770 151550 162870 134860 143200 171880 148750 172220 112950 99967 124820 118830 125960 138270 133370 139420 142940 152970 138070 153270 164320 141650 146430 172050 142430 163490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 174390000 31508 4349 29599 59237 47829 47829 1 9606 Homo sapiens 0.028028615833591175 YSEGEIR Unmodified 852.39775 0.39774656 2291 Q5LJB0;B2RB07;Q9Y5K5-2;Q9Y5K5-4;Q9Y5K5-3;Q9Y5K5;H0Y6Y4;B4DW59;B7Z9U9;H0Y4E0 UCHL5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes no 0 0 0 1.5 0.5 1 1 35.377 35.405 2 0.0051349 7823 20230619_1881_Aki_TMTPro18x_K_F2 143.23 125.19 161170 88656 158750 175410 217130 225510 185780 199590 231580 192480 236010 234340 258020 202800 198780 138350 265780 234380 148710 81981 162420 170480 220040 223510 190580 205450 233410 196270 242810 234760 259740 207040 206500 145670 253430 221720 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 253350000 31509 2291 29600 59238;59239 47830;47831 47831 2 9606 Homo sapiens -0.03435640441716714 YSEGYPGK Unmodified 899.4025 0.40249759 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;G3V5L0;G3V4W5;G3V540;G3V2E4;G3V2W0;G3V4X0;G3V4T0;G3V3Y8;G3V241 SHMT2;HEL-S-51e Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 0 5.5 0.5 1 1 41.667 41.757 2;3 7.6392E-09 10257 20230619_1885_Aki_TMTPro18x_K_F5 161.11 108.43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31510 657 29601 59240;59241 47832;47833 47832 2 9606 Homo sapiens -0.05122756298942477 YSEGYPGKR Unmodified 1055.5036 0.50360861 657 P34897;V9HW06;B4E1G2;A0A024RB99;P34897-3;Q53ET4;B4DJQ3;P34897-2;G3V5L0;G3V4W5;G3V540;G3V2E4;G3V2W0;G3V4X0;G3V4T0;G3V3Y8;G3V241 SHMT2;HEL-S-51e Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase yes no 0 0 1 7.5 0.5 1 1 36.052 36.079 3 0.0028947 7886 20230619_1888_Aki_TMTPro18x_K_F8 87.258 57.785 202870 205440 284750 174980 426990 258800 327680 354520 92990 415200 587920 581210 529030 457050 625340 334680 546050 497780 188490 187760 283670 180880 427050 258280 329520 356900 128800 420410 577660 577930 545980 469170 628150 348480 522890 471250 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 356620000 31511 657 29602 59242;59243 47834;47835 47835 2 9606 Homo sapiens -0.021923045962239485 YSEGYPGQR Unmodified 1055.4672 0.46722311 2836 D3DXC9;Q53ET7;P34896-2;P34896;J3KRK5;J3KRZ5;B4DZB5;P34896-3 SHMT1 Serine hydroxymethyltransferase;Serine hydroxymethyltransferase, cytosolic yes no 0 0 0 4 0 1 36.261 36.307 2 0.00029412 8052 20230619_1883_Aki_TMTPro18x_K_F4 113.7 95.159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31512 2836 29603 59244 47836 47836 1 9606 Homo sapiens -0.058291814929589236 YSEPPEAR Unmodified 947.43486 0.43486035 2192 B4DLV6;B1AK66;Q8TAD8;B4DDK7 SNIP1 Smad nuclear-interacting protein 1 yes no 0 0 0 2 0 1 33.783 33.84 2 0.0065878 7228 20230619_1881_Aki_TMTPro18x_K_F2 110.12 82.999 22875 14715 25541 26140 32639 37791 29680 32074 32322 30660 33668 38746 37814 33275 32300 23400 42357 38139 21144 13574 25837 25590 33268 37172 30188 33110 32841 31311 34694 38736 38214 33997 33441 24534 40401 36084 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20330000 31513 2192 29604 59245 47837 47837 1 9606 Homo sapiens -0.04095968895956048 YSESLLCSNLESATYSNR Unmodified 2092.9371 0.93714833 3941 Q15785;B4DXU3 TOMM34 Mitochondrial import receptor subunit TOM34 yes no 0 0 0 6 0 1 56.494 56.568 3 1.1070999999999999E-38 16676 20230619_1886_Aki_TMTPro18x_K_F6 255.16 244.9 26607 22360 24473 26332 26832 22476 28848 29229 31204 30094 29437 26842 35312 30871 33830 33276 28743 32578 24590 20503 25076 26229 27685 23200 29045 29417 31597 30271 30534 27552 35780 31839 34144 33368 27577 30936 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 130630000 31514 3941 29605 59246 47838 47838 1 9606 Homo sapiens -0.06560275643278146 YSETDADPHNAR Unmodified 1374.58 0.58002103 4181 Q86SK9;Q86SK9-2 SCD5 Stearoyl-CoA desaturase 5 yes no 0 0 0 1 0 1 29.902 29.902 3 1.201E-09 5940 20230619_1880_Aki_TMTPro18x_K_F1 170.04 156.08 9208.6 4428.1 9911.8 9799.8 10531 11253 5149.7 4266.2 3353.5 8231.9 17068 14469 9141.8 9737.4 12268 6114.8 15188 17086 8498.4 4105.8 10012 9457.9 10738 11104 5471.5 4961.2 4065.5 8290.7 16504 14243 9738.3 10013 12547 6835.2 14517 16105 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 19666000 31515 4181 29606 59247 47839 47839 1 9606 Homo sapiens -0.09228577557587414 YSETLKPDNFEESGYTFIAPR Unmodified 2463.1594 0.15942035 1875 A0A994J595;P54289-4;P54289-5;P54289;H0Y715 CACNA2D1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 1 7 0 1 58.949 58.998 3 8.2225E-17 17387 20230619_1887_Aki_TMTPro18x_K_F7 165.74 158.16 30468 27190 34128 25870 22876 21275 34650 30217 27298 36610 39261 32885 37382 31691 38720 36477 39043 39523 28217 24881 34142 26228 24897 22101 34047 30433 28725 36514 39607 33534 38266 32996 39355 36758 37356 37505 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33759000 31516 1875 29607 59248 47840 47840 1 9606 Homo sapiens -0.013632980262627825 YSEVFEAINITNNEK Unmodified 1769.8472 0.84719434 1352 Q5U5J2;P68400;A0A2R8Y5A0;B2R6D7;E7EU96;Q2I0Y7;A0A2R8YD58;A0A2R8YFU2;B5BUH5;A0A2R8YF43;A0A2R8YDP2;Q8NEV1;A0A2R8Y4D6;A0A2R8YDY7;A0A2R8Y4H0;A0A2R8YEW1;V9GYA2;A0A2R8Y7T1;A0A2R8YCK2;A0A2R8YF47;V9GY80;A0A2R8YEL7;A0A2R8Y797;A0A2R8Y3W6 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 yes no 0 0 0 5 0 1 62.041 62.089 3 0.00085447 18933 20230619_1885_Aki_TMTPro18x_K_F5 54.393 44.197 56339 44844 49431 51630 49505 56513 57123 65227 62133 53009 52699 55160 55115 47600 60444 69133 65344 68199 52033 41120 50806 51674 51651 56972 57330 65676 62620 54285 54661 55686 56449 50485 61690 69041 62493 64775 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 209550000 31517 1352 29608 59249 47841 47841 1 9606 Homo sapiens -0.006935371895224307 YSFLQFDPAPR Unmodified 1339.6561 0.65608651 1200 P62714;A0A140VJS0;B3KRM2;Q5U0I7;Q8WZ56;P67775;B3KUN1;A0A8V8TQA1;Q6I9T8;A0A8V8TRB3;B3KQ51;A0A8V8TQU8;P67775-2;H0YBN9 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes no 0 0 0 1.67 0.471 1 2 61.477 61.484 2;3 0.00048927 19233 20230619_1881_Aki_TMTPro18x_K_F2 132.78 112.99 644310 544430 646590 715830 603900 818770 726500 734290 846790 928370 876730 908710 934530 805860 828820 1017600 944290 1042100 595920 499770 656640 709970 635240 817730 729280 761100 857620 927180 900820 919820 947090 845920 852120 1020000 903050 989130 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1396700000 31518 1200 29609 59250;59251;59252 47842;47843;47844 47843 3 9606 Homo sapiens -0.00015528919493590365 YSFMATVTK Unmodified 1046.5107 0.51066783 86 A0A024R0A8;O43865 AHCYL1 Adenosylhomocysteinase;Putative adenosylhomocysteinase 2 yes no 0 0 0 3 0 1 55.79 55.831 2 0.037014 16702 20230619_1882_Aki_TMTPro18x_K_F3 68.657 43.098 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31519 86 29610 59253 47845 47845 1 9606 Homo sapiens -0.010727080400329214 YSGAYGASVSDEELK Unmodified 1574.71 0.71003215 2760 C9JRZ6;A4D1N4;Q9NX63;F8WAR4;A0A286YEX5;B7Z1X9 CHCHD3 MICOS complex subunit MIC19 yes no 0 0 0 3 0.816 1 1 1 50.226 50.28 3 1.2408E-08 14278 20230619_1882_Aki_TMTPro18x_K_F3 118.13 103.57 197090 143280 172470 205400 183490 211050 229190 213190 239970 226790 200450 210750 247320 174830 164940 267710 252000 273950 181920 131730 177660 202310 191040 212950 228680 218060 242360 227980 209570 213520 246890 186650 174550 267510 240430 260060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 814420000 31520 2760 29611 59254;59255;59256 47846 47846 1 9606 Homo sapiens -0.054334460690824926 YSGETVQER Unmodified 1067.4884 0.48835248 4566 Q9NPL8;C9JU35;C9JR82 TIMMDC1 Complex I assembly factor TIMMDC1, mitochondrial yes no 0 0 0 2 0 1 33.474 33.532 2 0.0044591 7083 20230619_1881_Aki_TMTPro18x_K_F2 90.696 39.35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31521 4566 29612 59257 47847 47847 1 9606 Homo sapiens -0.042692161840932386 YSGGNYR Unmodified 815.35622 0.3562161 15 A0A024QYX3;P98179 RBM3 RNA-binding protein 3 yes no 0 0 0 6 0.816 1 1 1 31.433 31.503 2 0.06574 5869 20230619_1887_Aki_TMTPro18x_K_F7 79.116 51.591 47841 21921 55110 65280 96834 116630 84826 102150 79545 46730 76337 93169 66022 73743 74410 27458 99937 86643 44172 20457 56097 62913 96982 113550 86074 103800 81069 51638 78171 91714 68254 74237 76648 31818 95280 81716 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 67754000 31522 15 29613 59258;59259;59260 47848 47848 1 9606 Homo sapiens -0.058847764103916234 YSGGNYRDNYDN Unmodified 1436.5593 0.55928559 15 A0A024QYX3;P98179 RBM3 RNA-binding protein 3 yes no 0 0 1 2.5 0.5 1 1 36.843 36.9 2 0.0010788 8444 20230619_1881_Aki_TMTPro18x_K_F2 131.42 115.16 103330 90352 92771 99786 155250 131700 158810 164810 153750 156340 151410 116660 166040 139510 121100 179740 195330 130730 95511 82788 96094 100490 156060 131620 159700 165720 156920 157220 155820 121230 166940 145250 128320 177070 185720 124920 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 158410000 31523 15 29614 59261;59262 47849;47850 47849 2 9606 Homo sapiens -0.1415316793720649 YSGPEDDAAISLAFSK Unmodified 1669.7835 0.78353145 3433 P11388;P11388-2;P11388-3;P11388-4;A0A4D6UXC9 TOP2A DNA topoisomerase 2-alpha yes no 0 0 0 5 0 1 61.717 61.765 2 6.7965E-08 18702 20230619_1885_Aki_TMTPro18x_K_F5 153.38 135.07 54595 43950 52913 59295 32898 59417 50769 45838 51588 69000 66330 54129 69886 52832 60656 78634 57728 63764 50464 40363 53655 58594 36414 59700 50210 48412 53161 68029 67430 55644 70712 55929 61785 77717 55304 60698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34323000 31524 3433 29615 59263 47851 47851 1 9606 Homo sapiens -0.024568976266209575 YSGTLNLDR Unmodified 1037.5142 0.5141733 3606 P49327;A0A0U1RQF0 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 6 0.816 1 1 1 44.676 44.76 2 0.00044896 11599 20230619_1886_Aki_TMTPro18x_K_F6 135.43 107.21 818700 557850 743930 789410 680340 863770 818710 806030 893760 738620 838370 739550 788040 697410 858460 657780 898250 684820 755660 512950 761390 778940 716500 865930 819920 825760 903340 750470 860170 749510 809440 718650 872660 663990 857580 650940 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 938720000 31525 3606 29616 59264;59265;59266 47852;47853 47852 2 9606 Homo sapiens -0.003083219418385852 YSHVQEVQER Unmodified 1273.6051 0.60511357 1867 Q93008-3;Q93008;A0A994J4T3;D3DWB6;A0A994J4R6;A0A994J6S4;A0A994J583;A0A994J7K1;O00507;O00507-2 USP9X;USP9Y Probable ubiquitin carboxyl-terminal hydrolase FAF-X;Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-Y yes no 0 0 0 2.5 0.5 1 1 30.698 30.773 3 2.4493E-05 6043 20230619_1881_Aki_TMTPro18x_K_F2 154.84 116.28 13276 6937.4 11321 14768 14421 16481 13687 15010 18910 16204 20175 17485 18330 16273 14260 16816 17683 12834 12233 6424.8 11731 14272 14733 16486 14006 15466 19004 16360 20532 17662 18578 16843 14774 16665 16852 12250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72072000 31526 1867 29617 59267;59268 47854 47854 1 9606 Homo sapiens -0.020744779643337097 YSIDQEFLK Unmodified 1141.5655 0.56554017 2141 A8K9T8;Q9BYT8;B3KU23;E9PCB6;Q9BQD0;H0YAK4;Q96K48;Q8NDD9 NLN;DKFZp564F123 Neurolysin, mitochondrial yes no 0 0 0 5.5 0.5 1 1 57.683 57.746 2 4.7108E-08 17172 20230619_1886_Aki_TMTPro18x_K_F6 200.07 153.08 221930 201080 211320 240920 228250 278990 263920 258150 289480 304030 293080 299430 317010 258020 294860 336140 329870 328020 205270 184370 216040 240510 236930 278700 264810 266380 293760 304640 301650 302790 321680 271710 302380 335960 315260 311650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 153490000 31527 2141 29618 59269;59270 47855;47856 47856 2 9606 Homo sapiens 0.0004200203222808341 YSLATGNWGDQK Unmodified 1338.6204 0.62042929 2484 B4DH29;C9J2Y9;B4DHJ3;P30876;C9J4M6;B4DR40 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 yes no 0 0 0 8 0 1 52.96 53.034 2 6.6087E-12 14858 20230619_1888_Aki_TMTPro18x_K_F8 170.52 118.04 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31528 2484 29619 59271 47857 47857 1 9606 Homo sapiens -0.03533611167131312 YSLDPENPTK Unmodified 1162.5506 0.55061839 188 A0A087WXM6;J3QQT2;J3KRX5;A0A024R261;A0A0A6YYL6;P18621;P18621-3;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81;J3KSJ0 RPL17;hCG_24487;RPL17-C18orf32 60S ribosomal protein L17 yes no 0 0 0 4.5 0.957 1 2 2 1 48.119 48.185 2;3 3.0425999999999997E-19 12950 20230619_1885_Aki_TMTPro18x_K_F5 254.42 205.86 319110 270730 288900 308230 317740 356310 355630 347920 351780 400970 317180 311920 454150 324810 284400 480660 417490 434450 294910 248160 296570 308910 328800 356510 356230 357340 357810 399620 332880 321350 450830 343210 300610 477270 398280 413070 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2612100000 31529 188 29620 59272;59273;59274;59275;59276;59277 47858;47859;47860 47860 3 9606 Homo sapiens -0.024154898357664933 YSLEPVAVELK Unmodified 1246.6809 0.68090428 3374 V9HWF4;P00558;P00558-2 HEL-S-68p;PGK1 Phosphoglycerate kinase;Phosphoglycerate kinase 1 yes no 0 0 0 6.29 1.03 2 2 2 1 60.204 60.254 2;3 1.3303E-17 17886 20230619_1887_Aki_TMTPro18x_K_F7 241.13 182.15 409710 357690 379330 475910 419720 491910 463920 466300 463890 610520 608650 636230 654440 586310 565180 702620 619930 700110 378780 328350 389110 470890 434150 495520 465350 482040 479070 609800 619840 642990 662380 612450 580100 703670 593170 664700 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 8913400000 31530 3374 29621 59278;59279;59280;59281;59282;59283;59284 47861;47862;47863;47864 47864 4 9606 Homo sapiens 0.0674310616323055 YSLKPNDQILAEDK Unmodified 1632.8359 0.83590137 1168 Q86U79;A0A140VJE0;P55263-2;P55263;P55263-3;A0A5K1VW54;A0A5K1VW94;A0A5F9ZH31;A0A5F9ZH72;A0A5F9ZH83;A0A5F9ZH76 ADK Adenosine kinase yes no 0 0 1 6 0.816 1 1 1 51.472 51.549 3 0.00090977 14284 20230619_1887_Aki_TMTPro18x_K_F7 86.548 60.682 264840 247710 264070 277220 243370 254200 273140 264610 269460 349970 345360 333680 346090 297710 382190 318310 328710 300510 245100 226950 268060 277350 255040 259200 273720 271950 278120 348440 350870 338150 354810 309350 384680 318820 314830 285720 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 756360000 31531 1168 29622 59285;59286;59287 47865 47865 1 9606 Homo sapiens 0.04479685506976239 YSLPASPSVILPIQVMLTPLQK Unmodified 2394.3596 0.35964049 2369 B3KP18;Q6NUQ1 RINT1 RAD50-interacting protein 1 yes no 0 0 0 7 0 1 67.019 67.042 3 0.00029622 20923 20230619_1887_Aki_TMTPro18x_K_F7 77.08 66.446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31532 2369 29623 59288 47866 47866 1 9606 Homo sapiens 0.21823505107704477 YSLQSANASSLSSGQLK Unmodified 1739.869 0.86899241 1600 Q6DHZ8;B2RBM8;A0A669KBJ7;Q9H2P0;A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein yes no 0 0 0 2 0 1 52.025 52.064 3 8.1466E-19 15345 20230619_1881_Aki_TMTPro18x_K_F2 187.78 169.64 109390 84920 106900 108520 92524 124780 124830 119370 107020 108640 93585 87885 102830 86659 114480 114060 109710 88081 101100 77956 108640 107880 98221 124740 123450 122030 109550 109720 97091 90175 105210 90864 115930 112750 104870 84014 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 159010000 31533 1600 29624 59289 47867 47867 1 9606 Homo sapiens 0.028652675590365106 YSLVIIPK Unmodified 931.57425 0.57425436 550 Q5R3B4;B2R4Q7;A0A024R8Z5;O95563 MPC2;BRP44 Mitochondrial pyruvate carrier 2 yes no 0 0 0 4 0 1 60.159 60.162 3 0.021304 18388 20230619_1883_Aki_TMTPro18x_K_F4 73.26 73.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31534 550 29625 59290 47868 47868 1 9606 Homo sapiens 0.10573020459378313 YSNDLYELQASR Unmodified 1457.6787 0.67867245 1331 A0A223PQH6;A6NEM2;P51610-2;P51610;P51610-4;Q05C05;P51610-3 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 0 0 0 4 0 1 50.468 50.499 2 7.1618E-13 14202 20230619_1883_Aki_TMTPro18x_K_F4 208.33 174.95 132510 100870 117560 128140 115720 128420 130340 128400 139580 156830 159220 151970 167050 135960 144440 171010 156250 159840 122360 92599 120700 127170 120780 129840 130900 131950 142550 156790 162710 153990 169120 142650 148080 170590 149410 151920 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 66479000 31535 1331 29626 59291 47869 47869 1 9606 Homo sapiens -0.0318597431253238 YSNDPVVASLAQDIFK Unmodified 1765.8887 0.88866522 4386 Q96P70 IPO9 Importin-9 yes yes 0 0 0 7.5 0.5 1 1 64.502 64.527 3 7.2899E-15 19739 20230619_1888_Aki_TMTPro18x_K_F8 186.7 167.12 467900 343100 411200 429040 386320 450490 406080 396600 485630 528380 547980 565440 607600 490430 512160 666190 544150 677250 431940 314970 422130 426490 404240 452670 410950 412520 493020 528050 561940 569950 613480 517800 525160 666730 521250 642650 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 404720000 31536 4386 29627 59292;59293 47870;47871;47872 47872 3 9606 Homo sapiens 0.03635643569805325 YSNLVQSVLSSR Unmodified 1351.7096 0.70957864 4413 Q9BQP7;Q5QPE7;Q5QPE8 MGME1 Mitochondrial genome maintenance exonuclease 1 yes no 0 0 0 5 0 1 60.953 61.003 2 0.0069982 18312 20230619_1885_Aki_TMTPro18x_K_F5 96.067 67.899 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31537 4413 29628 59294 47873 47873 1 9606 Homo sapiens 0.04779223792365883 YSNSDVIIYVGCGER Unmodified 1730.7934 0.79338463 3566 P38606-2;P38606;A0A994J738 ATP6V1A V-type proton ATPase catalytic subunit A yes no 0 0 0 6 0 1 54.121 54.198 2 2.6177E-37 15690 20230619_1886_Aki_TMTPro18x_K_F6 232.25 194.17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31538 3566 29629 59295 47874 47874 1 9606 Homo sapiens -0.04278032892875672 YSNSEVVTGSGR Unmodified 1254.584 0.58404378 4154 Q7L576;X5D2F4;A0A087WVZ5;B3KWV6;A0A0G2JQT1;A0A0G2JR96 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 4.5 0.5 1 1 36.351 36.419 2 2.2765E-09 8032 20230619_1885_Aki_TMTPro18x_K_F5 181.31 124.58 37780 30322 35133 39394 47920 45340 44876 44806 49910 48267 52910 53907 53277 43799 43582 42184 62548 56012 34910 27836 36120 39110 48629 45401 45577 45901 50688 48763 54156 54098 53908 45456 45520 43199 59617 53078 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 193470000 31539 4154 29630 59296;59297 47875 47875 1 9606 Homo sapiens -0.033064880638676186 YSPDVLK Unmodified 820.43307 0.43306943 1731 A0A804HJA4;J3KN16;Q5VYK3;B3KXF2 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 6.5 0.5 1 1 48.374 48.456 2 0.025129 13228 20230619_1886_Aki_TMTPro18x_K_F6 102.72 51.147 81780 75795 76891 87154 107940 111800 95936 91049 114320 81074 82758 73245 85447 66868 88557 87650 94903 76544 75645 69462 79036 87392 109320 110740 97948 94189 114100 82322 86470 74564 87256 70305 90333 87135 90614 72887 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123230000 31540 1731 29631 59298;59299 47876 47876 1 9606 Homo sapiens 0.015670220860897643 YSPEFKDPLIDK Unmodified 1450.7344 0.73439641 522 A0A024R8L0;J3QLS3;Q9Y2R9;J3QKW2 MRPS7 28S ribosomal protein S7, mitochondrial yes no 0 0 1 6.5 0.5 1 1 55.642 55.711 4 0.016135 16070 20230619_1887_Aki_TMTPro18x_K_F7 69.602 38.374 29019 28494 33270 37683 27295 42694 34194 36768 51085 31699 35864 32807 33081 27589 34690 32660 31068 32049 26899 26145 33396 37351 29129 42615 34601 37836 50399 32386 37370 33096 33925 28901 35037 32715 29768 30443 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 44867000 31541 522 29632 59300;59301 47877 47877 1 9606 Homo sapiens 0.027058588750833223 YSPGYNTEVGDK Unmodified 1328.5885 0.58846046 846 O95299;E7ESZ7;A0A7I2V594;Q7Z518;A0A7I2V3H5;A0A087WXC5;A8K413;A0A7I2YQU0;Q53QE8 NDUFA10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes no 0 0 0 4 0 1 44.931 44.975 2 0.00010572 11706 20230619_1883_Aki_TMTPro18x_K_F4 121.08 93.334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31542 846 29633 59302 47878 47878 1 9606 Homo sapiens -0.06269023640970772 YSPPAISPLVSEK Unmodified 1386.7395 0.73948179 1642 A0A7G6J4N4;Q14694;Q14694-3;Q14694-2 USP10 Ubiquitin carboxyl-terminal hydrolase 10 yes no 0 0 0 8 0 1 56.62 56.677 3 0.0012028 16406 20230619_1888_Aki_TMTPro18x_K_F8 82.705 66.814 37190 39195 44139 37316 36478 49185 47348 31150 44068 53639 40522 43307 55529 44878 45119 46642 53586 45140 34504 35847 44120 38022 38819 48434 46985 33710 45021 52709 42424 44437 55694 46357 46532 46764 51131 42921 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72063000 31543 1642 29634 59303 47879 47879 1 9606 Homo sapiens 0.06158162737665407 YSPTSPTYSPTSPK Unmodified 1511.7144 0.71438925 1633 A0A6Q8PGB0;P24928;B4DET1 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 0 1.5 0.5 1 1 45.622 45.662 3 9.1358E-07 12584 20230619_1880_Aki_TMTPro18x_K_F1 127.02 83.257 69899 66862 67203 57176 87392 93421 89717 70560 90595 43112 43053 53773 48601 41928 50510 54066 53032 51546 64681 61122 68744 59080 89200 91248 90259 72968 90217 45474 46756 53708 49552 44264 51486 53988 50706 48991 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 143410000 31544 1633 29635 59304;59305 47880 47880 1 9606 Homo sapiens -0.020999368555294495 YSPTSPTYSPTSPVYTPTSPK Unmodified 2257.079 0.079044767 1633 A0A6Q8PGB0;P24928;B4DET1 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 0 0 0 2 0 1 53.104 53.137 3 5.4983E-08 15813 20230619_1881_Aki_TMTPro18x_K_F2 104.89 93.837 13343 10417 14425 18268 14044 17302 14808 17720 17735 21194 21365 23903 21339 21573 21193 22285 24860 26770 12343 9599.8 14583 17774 14654 17562 14992 18164 18064 21307 21768 24050 21798 22358 21761 22632 23763 25372 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 16861000 31545 1633 29636 59306 47881 47881 1 9606 Homo sapiens 0.0007884065066718904 YSQFINFPIYVWSSK Unmodified 1877.9352 0.93522148 3452 P14625;V9HWP2;Q5CAQ5;A0A7P0T823;A0A7P0TAT8;H0YIV0;A0A7P0TAE1;A0A087WT78;A0A7P0T917;A0A7P0TAY2;Q59FC6;A0A7P0TBC2;Q96GW1 HSP90B1;HEL-S-125m;TRA1 Endoplasmin yes no 0 0 0 6.67 0.471 1 2 65.641 65.672 3 2.0901E-05 20328 20230619_1887_Aki_TMTPro18x_K_F7 104.41 94.456 136050 115670 119890 171860 124550 147620 163770 174550 197290 187050 172520 238130 192980 174200 168530 221370 211490 269720 125710 106330 123560 168520 130200 151640 163860 176830 198130 189860 179510 237040 195280 184290 174490 224210 202340 255450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 340310000 31546 3452 29637 59307;59308;59309 47882;47883 47883 2 9606 Homo sapiens 0.031371281917472515 YSQGDDDGSSSSGGSSVAGSQSTLFK Unmodified 2510.0681 0.068098743 151 Q9UH99-2;Q9UH99;B4E2A6;A0A024R1P7;A0A8I5QKM0;B4DIU6;Q9UH99-3;B0QY60;A8K129;B0QY64;A0A024R1S6;B0QY63;B0QY66;B0QY67;B0QY68;B0QY69 SUN2;UNC84B SUN domain-containing protein 2 yes no 0 0 0 4 0 1 51.251 51.278 3 9.7123E-09 14601 20230619_1883_Aki_TMTPro18x_K_F4 103.63 95.445 8290.7 5857.6 5795.4 6938.2 6068.4 6208.4 8242.9 9345.4 6680.1 10613 10439 10188 11304 8560.2 9881.6 11829 10564 12177 7640.6 5375.3 6106.3 6912.5 6336.8 6407.2 8141.6 9358.7 7059.4 10630 10570 10310 11433 9063.3 10123 11847 10112 11556 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 49718000 31547 151 29638 59310 47884 47884 1 9606 Homo sapiens -0.12653258252157684 YSQICAK Unmodified 868.41129 0.41128813 3665 Q5VTU8;P56381 ATP5EP2;ATP5E ATP synthase subunit epsilon-like protein, mitochondrial;ATP synthase subunit epsilon, mitochondrial yes no 0 0 0 4.5 3.5 1 1 42.014 42.013 2 0.013784 10976 20230619_1880_Aki_TMTPro18x_K_F1 113.5 73.836 153520 76350 212730 198970 257010 321120 222120 297990 232650 110300 191400 197210 146130 144350 226070 76182 226870 172520 142070 71001 211800 192240 262640 314450 226540 300710 234250 124270 196550 194470 154540 147030 227650 83559 216680 163040 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 81575000 31548 3665 29639 59311;59312 47885;47886 47885 2 9606 Homo sapiens -0.02818105934113646 YSQKEDK Unmodified 896.42396 0.42396131 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;Q6LDX7;Q8NI98;A0A494C034;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;P06753-7;Q8NAH0;Q5VU62 TPM3;DKFZp686J1372;TPM3-ROS1;OK/SW-cl.5;HEL-S-82p Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor no no 0 0 1 3 0.816 1 1 1 37.368 37.421 3 0.03691 8650 20230619_1881_Aki_TMTPro18x_K_F2 68.227 4.136 591780 308890 678730 676030 856990 913750 698220 830360 871760 669730 945680 921020 895930 737160 797810 460430 947440 808430 546630 286210 684800 654980 871600 903310 719130 849330 880360 693360 964280 916860 911090 752330 819230 487900 904090 764680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 9650600000 31549 1095;1096 29640 59313;59314;59315 47887 47887 1 9606 Homo sapiens -0.02839371270238189 YSQKEDKYEEEIK Unmodified 1687.7941 0.79409613 1095;1096 P06753-2;A0A0S2Z4G4;B2RDE1;Q5HYB6;P06753-6;P06753-3;Q8NAG3;B4DWT5;J3KN67;M1VPF4;A0A2R2Y2Q3;B4DQ80;Q6LDX7;Q8NI98;A0A494C034;A0A0S2Z4I4;P06753-5;A0A0S2Z4G8;P06753-4;P06753;P06753-7;Q8NAH0;Q5VU62 TPM3;DKFZp686J1372;TPM3-ROS1;OK/SW-cl.5;HEL-S-82p Tropomyosin alpha-3 chain;Tyrosine-protein kinase receptor no no 0 0 2 5 0 1 44.75 44.828 4 0.001969 11556 20230619_1885_Aki_TMTPro18x_K_F5 83.823 65.96 379700 448820 531590 458460 690280 392170 677170 491550 197560 482150 541010 135130 168610 95399 801710 75411 88054 55958 353230 410590 528980 461930 699390 405200 668770 495460 242950 476270 521270 152360 212590 99229 760730 77398 90926 53473 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 208770000 31550 1095;1096 29641 59316 47888 47888 1 9606 Homo sapiens -0.02228914972192797 YSQLVVETIR Unmodified 1206.6608 0.66083754 4293;1866 Q92522;A0A994J4R3 H1FX Histone H1x no no 0 0 0 7.5 0.5 2 2 54.115 54.183 2;3 2.8357E-05 15413 20230619_1887_Aki_TMTPro18x_K_F7 171.34 128.74 503310 403090 426650 508040 353150 423950 446140 467290 456120 444660 458270 463530 487340 428420 461840 439470 484910 502610 464750 369930 439180 503320 375530 436000 444990 473950 464190 451090 471470 468460 495330 443730 471220 445110 463860 476650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1853099999.9999998 31551 4293;1866 29642 59317;59318;59319;59320 47889;47890 47889 2 9606 Homo sapiens 0.06577355223271297 YSQSDLEQTK Unmodified 1197.5513 0.55134667 1432 G8JLG1;A0A384MR33;Q14683;Q6P2R1;A0A6Q8PHC3;Q6MZR8;A8K7A6;B7Z709 SMC1A;DKFZp686L19178 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A yes no 0 0 0 3 0 1 42.875 42.941 2 1.2554E-05 10876 20230619_1882_Aki_TMTPro18x_K_F3 164.33 105.66 34306 22371 37125 36008 39890 48146 35589 40095 49252 37528 54711 54154 53628 49507 45400 32345 60002 57970 31704 20608 37513 35383 41152 47546 36584 41439 49558 38604 55809 54041 54408 50327 47037 34264 57254 54796 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 61836000 31552 1432 29643 59321 47891 47891 1 9606 Homo sapiens -0.03952695186717392 YSQTGNYELAVALSR Unmodified 1670.8264 0.82639932 619 A0A0C4DGS1;A0A024RAD5;P39656;P39656-3;P39656-2 DDOST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes no 0 0 0 8 0 1 55.722 55.784 3 5.5554E-42 16020 20230619_1888_Aki_TMTPro18x_K_F8 224.59 205.35 84973 69624 86991 87598 79777 92634 100670 95599 103950 100150 98725 105000 109110 83482 112870 114400 96909 106580 78588 63890 88112 87071 84006 93344 100400 97598 105510 101100 102080 105650 111130 88486 113840 114030 92943 101280 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 341110000 31553 619 29644 59322 47892 47892 1 9606 Homo sapiens 0.017819172214785794 YSQVLANGLDNK Unmodified 1320.6674 0.66737948 3710 P62269;J3JS69 RPS18 40S ribosomal protein S18 yes no 0 0 0 7.5 0.5 1 1 53.315 53.386 3 3.5268E-13 15100 20230619_1887_Aki_TMTPro18x_K_F7 162.38 127.5 529930 422120 517840 493990 457970 616790 617030 553610 574040 660720 646640 675310 676100 524150 658420 739100 670920 637580 489830 387120 526230 494730 485340 612700 611600 572860 590520 662210 661700 679750 687870 557080 670970 733390 641580 606780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1399000000 31554 3710 29645 59323;59324 47893;47894 47893 2 9606 Homo sapiens 0.019872483839890265 YSQYLDR Unmodified 943.43995 0.43994572 1555 A0A499FI31;Q15020;Q15020-4;A0A9E8DG70;B4DRG9;B4E3R6 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 0 0 0 5.5 0.5 1 1 43.513 43.6 2 0.012295 11050 20230619_1885_Aki_TMTPro18x_K_F5 115.49 76.688 277430 220390 260360 257190 294950 361060 333080 306830 343500 246700 243680 244760 258770 223620 319830 268540 283790 236510 256360 202120 266490 258100 304920 355880 333800 315590 345120 252710 255600 247950 266580 233680 321850 267550 271550 225150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 238180000 31555 1555 29646 59325;59326 47895;47896 47895 2 9606 Homo sapiens -0.034036650333405305 YSSDYFQAPSDYR Unmodified 1597.6685 0.66850169 1081 A0A0S2Z3Y1;Q08380;B4DVE1;B4DI70;B3KP88;B4DDG4;B4DWA8 LGALS3BP Galectin-3-binding protein yes no 0 0 0 5 0 1 51.214 51.289 2 8.0529E-11 14297 20230619_1885_Aki_TMTPro18x_K_F5 188.06 174.63 37306 32578 37554 35582 32055 43146 42130 37772 39191 48108 55566 56794 55696 47792 51666 58840 50926 55985 34512 29848 38047 35803 34044 42925 41818 39248 40763 48313 56259 56965 56636 50165 52611 58775 48768 53187 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108340000 31556 1081 29647 59327 47897 47897 1 9606 Homo sapiens -0.10642582037780812 YSSNLGNFNYER Unmodified 1462.6477 0.64770667 4478 Q9BZZ5-2;Q9BZZ5-5;B4DDR3 API5 Apoptosis inhibitor 5 yes no 0 0 0 7.5 0.5 1 1 48.476 48.553 2 1.2919E-09 12916 20230619_1887_Aki_TMTPro18x_K_F7 212.2 193.11 203360 170640 190060 205180 181390 223970 230920 216600 229760 211500 207670 191830 204820 176570 227060 229040 215900 201270 187970 156500 194190 204630 190580 224830 229900 221690 233210 213450 213980 195240 210200 185390 229890 227780 206580 191510 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 202590000 31557 4478 29648 59328;59329 47898;47899 47898 2 9606 Homo sapiens -0.06511127626754387 YSSSQPEPR Unmodified 1049.4778 0.47778779 2586 E7EPP6;B4DT73;O14757-2;O14757;O14757-3 CHEK1 Serine/threonine-protein kinase Chk1 yes no 0 0 0 3 0 1 30.859 30.944 2 0.00023231 5966 20230619_1882_Aki_TMTPro18x_K_F3 117.89 83.637 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31558 2586 29649 59330 47900 47900 1 9606 Homo sapiens -0.04497198838521399 YSTDVSVDEVK Unmodified 1240.5823 0.58231244 2542 P00367;E9KL48;B4DMF5;B4DMG8;Q53GW3;B4E0N9;P00367-3;A0A804HJD7;B3KT18;A0A804HKE0;P49448;A0A140VK14;Q59FQ4;A0A804HJZ0 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase;Glutamate dehydrogenase 2, mitochondrial yes no 0 0 0 3.5 0.5 1 1 48.769 48.827 2 1.0528000000000001E-33 13621 20230619_1882_Aki_TMTPro18x_K_F3 239.93 218.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31559 2542 29650 59331;59332 47901;47902 47901 2 9606 Homo sapiens -0.02835541872491376 YSTSGSSGLTTGK Unmodified 1244.5885 0.58846046 3954 Q16891-2;Q16891;B9A067;B4DKR1;Q16891-4;B4DQY2;Q16891-3;B4DT20;Q3B7X4;B4E2B5;Q05DN3;D6RAW4 IMMT MICOS complex subunit MIC60 yes no 0 0 0 4.5 3.5 1 1 41.912 41.91 2 0.00024386 10264 20230619_1888_Aki_TMTPro18x_K_F8 131.83 109.74 37105 25072 46881 47917 64604 64465 57750 66562 72145 51427 78412 84814 73840 65556 61159 44123 89015 88879 34348 23148 47080 46698 65455 63945 59091 67421 72827 53817 79976 83879 74941 67160 63848 47249 84899 83944 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 57298000 31560 3954 29651 59333;59334 47903;47904 47904 2 9606 Homo sapiens -0.024050236409721037 YSVDIPLDK Unmodified 1048.5441 0.54407645 166 E4W6B6;B2R4D8;A0A024R1V4;P61353;K7ELC7 RPL27 60S ribosomal protein L27 yes no 0 0 0 5.83 1.07 1 1 2 2 56.179 56.235 2;3 0.00019014 16503 20230619_1886_Aki_TMTPro18x_K_F6 111.61 85.668 509230 419400 449120 503790 494470 555270 536450 537610 558320 582700 556160 534340 643800 507720 547610 669530 561570 575860 470430 384680 462270 502520 511310 557200 539190 551600 567850 584970 574410 544030 649410 533260 560000 664640 537270 547900 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4213999999.9999995 31561 166 29652 59335;59336;59337;59338;59339;59340 47905;47906;47907 47906 3 9606 Homo sapiens 0.021746170035157775 YSVLLPTYNER Unmodified 1353.6929 0.69286595 1110 A0A0S2Z4Y5;Q5QPK2;H0Y368;O60762;A0A804HIK9;A0A804HIB3;A0A0S2Z4U1;Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 yes no 0 0 0 4.5 3.5 1 1 55.529 55.56 2 0.0010305 15975 20230619_1888_Aki_TMTPro18x_K_F8 103.42 49.737 133920 94075 131780 150680 126470 175490 149890 149560 189540 167190 155530 158020 170090 149320 167290 168530 167870 194770 123710 86623 134130 147720 132760 174800 150980 155050 189470 167840 161850 160520 173050 155380 170210 170510 160800 184620 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 263630000 31562 1110 29653 59341;59342 47908;47909 47909 2 9606 Homo sapiens 0.03016722906409086 YSVQLLTPANLLAK Unmodified 1529.8817 0.88172935 1442 B5BUB1;A0A384MTR5;Q9Y265;H7C4G5 RUVBL1 RuvB-like 1 yes no 0 0 0 5 0 1 63.536 63.581 3 0.038664 19571 20230619_1885_Aki_TMTPro18x_K_F5 46.797 29.065 53394 20655 30809 45284 29096 60708 45481 44264 44205 47283 60751 44247 54318 36262 60416 58425 43065 49724 49036 19178 33278 43823 31073 59711 44867 46436 45733 47534 61176 44883 55828 38877 60365 57873 41418 47296 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 290810000 31563 1442 29654 59343 47910 47910 1 9606 Homo sapiens 0.13798375479882452 YSVQTADHR Unmodified 1075.5047 0.50467125 1426 A0A384MEG1;Q16658;B3KTA3 FSCN1 Fascin yes no 0 0 0 5 2 1 1 1 1 1 1 1 30.135 30.2 3 2.0031E-12 5603 20230619_1883_Aki_TMTPro18x_K_F4 195.58 156.79 124690 92454 152710 134230 173340 171580 142110 158210 156880 107430 156680 156400 122760 115460 145770 65932 137590 105130 115450 85008 152950 132610 177360 170350 145680 161160 158760 112830 159320 155070 127510 117790 146910 69554 131500 99556 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 2082499999.9999998 31564 1426 29655 59344;59345;59346;59347;59348;59349;59350 47911;47912;47913;47914 47912 4 9606 Homo sapiens -0.030060902273362444 YSWQDEIVQGTR Unmodified 1480.6947 0.69465686 797 A0A075B7B1;O15061-2;O15061;H0YL34 SYNM Synemin yes no 0 0 0 5 0 1 53.258 53.329 2 0.086143 15217 20230619_1885_Aki_TMTPro18x_K_F5 68.676 56.099 27830 20664 26903 26101 30817 39523 31330 32859 35902 33361 35845 39417 38179 35206 38762 43851 39983 46100 25712 18970 27468 26086 31764 38774 31707 34027 36314 33883 36915 39606 38940 36898 39504 44037 38286 43740 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32806000 31565 797 29656 59351 47915 47915 1 9606 Homo sapiens -0.026462680756594636 YSYVCPDLVK Unmodified 1242.5955 0.59546009 622 P61158;A0A024RAI1;Q59FV6;B4DXW1;B4DT29;B4DTI0 ACTR3 Actin-related protein 3 yes no 0 0 0 8 0 1 55.033 55.1 3 0.00087721 15767 20230619_1888_Aki_TMTPro18x_K_F8 94.692 77.75 107300 85845 90612 107600 114960 123460 109770 113060 138080 97005 94454 77681 88358 80086 104020 110320 91658 82872 99076 78780 93897 107060 117400 123400 111820 115780 137220 98411 98621 79946 91163 84083 104860 108830 87757 79035 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 113240000 31566 622 29657 59352 47916 47916 1 9606 Homo sapiens -0.01613382294112853 YSYYDESQGEIYR Unmodified 1671.7053 0.70528113 2033 A8K3Y8;Q9Y316;Q9Y316-3;Q9Y316-2 MEMO1 Protein MEMO1 yes no 0 0 0 2 0 1 48.767 48.832 2 0.0010586 13890 20230619_1881_Aki_TMTPro18x_K_F2 101.95 87.796 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31567 2033 29658 59353 47917 47917 1 9606 Homo sapiens -0.1037033021186744 YTAAVPYR Unmodified 939.48142 0.48141661 338 Q9UBM7;A0A804HJQ7;A8K0D2;A0A1Y1B909;X5DNI9;A0A024R5F7;A0A804HI25;A0A8I5KRR9;E9PM00;B4E1K5;A0A1Y1BG54;A0A1Y1BBN3 DHCR7 7-dehydrocholesterol reductase yes no 0 0 0 1 0 1 42.077 42.077 2 0.025055 11018 20230619_1880_Aki_TMTPro18x_K_F1 94.662 70.69 265610 229470 272610 256340 204760 258950 296670 282320 305170 171250 164000 136710 173060 131130 214150 192900 228640 132310 245740 210290 275300 256890 220690 262140 294020 283910 304300 178170 175280 140460 178300 138720 217680 189550 217960 126660 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 125940000 31568 338 29659 59354 47918 47918 1 9606 Homo sapiens 0.009255157259872249 YTAESSDTLCPR Unmodified 1398.6085 0.60854397 2081 A8K5W7;Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 0 3 0 1 41.053 41.112 2 2.6403000000000003E-31 10059 20230619_1882_Aki_TMTPro18x_K_F3 280.11 235.8 62881 44652 53455 64156 75842 80709 76172 75520 80888 82278 89399 93109 91406 79469 77422 98146 97461 96599 58024 41058 55492 63368 77007 80222 76914 77680 82499 83114 91426 93581 92588 83392 80194 98182 93050 91770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57953000 31569 2081 29660 59355 47919 47919 1 9606 Homo sapiens -0.07481595972649302 YTAQVDAEEK Unmodified 1152.5299 0.52988294 3323 O75947 ATP5H ATP synthase subunit d, mitochondrial yes yes 0 0 0 2 0 1 42.422 42.501 2 0.0038969 10975 20230619_1881_Aki_TMTPro18x_K_F2 104.94 65.639 146610 71050 140060 161700 148920 183870 154570 169770 212470 198060 243480 312030 255030 244120 153740 187260 330130 314460 135170 65908 143110 155930 154410 183700 157380 175190 214330 202130 249140 308870 255460 251040 168000 196140 314050 297390 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 75752000 31570 3323 29661 59356 47920;47921 47920 2 9606 Homo sapiens -0.04028080215448426 YTAQVDAEEKEDVK Unmodified 1623.7628 0.76279601 3323 O75947 ATP5H ATP synthase subunit d, mitochondrial yes yes 0 0 1 3 0 1 44.877 44.95 3 1.3281E-05 11805 20230619_1882_Aki_TMTPro18x_K_F3 120.66 101.09 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31571 3323 29662 59357 47922 47922 1 9606 Homo sapiens -0.02413488006300213 YTASGCEVIAVNTR Unmodified 1539.7351 0.73514147 1785 O60341-2;A0A8I5KXU4;R4GMQ1;A8K2R3;O60341;A0A8I5KRB8;A0A8I5QJJ5;A0A8I5QKM3;A0A8I5QJR3;A0A8I5KV76;A0A8I5KSH0;A0A8I5KVZ4 KDM1A Lysine-specific histone demethylase 1A yes no 0 0 0 6.5 0.5 1 1 46.005 46.091 2 1.088E-06 11775 20230619_1887_Aki_TMTPro18x_K_F7 162.32 148.92 34187 27559 30939 34842 25669 30447 28451 25689 29530 41008 38352 33454 39902 31818 35350 42952 38574 41602 31584 25292 31640 34523 27178 31016 28578 27003 30430 40381 38967 34264 40441 33482 36248 42883 36897 39517 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 142040000 31572 1785 29663 59358;59359 47923 47923 1 9606 Homo sapiens -0.01313669747514723 YTCGEAPDYDR Unmodified 1345.5245 0.52447999 3483 Q6FGJ9;P21266;Q59EJ5;A4UJ43 GSTM3 Glutathione S-transferase Mu 3 yes no 0 0 0 2.5 0.5 1 1 38.998 39.059 2 0.057595 9360 20230619_1881_Aki_TMTPro18x_K_F2 63.415 58.803 242010 201310 244150 247520 156150 167330 195880 190010 213260 269100 348280 283720 355200 314500 249290 287680 325910 259050 223820 184680 246480 245210 170180 175900 196030 194850 221710 268130 350680 288620 357300 321870 259770 287920 310630 246590 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 72201000 31573 3483 29664 59360;59361 47924 47924 1 9606 Homo sapiens -0.13446127069573777 YTCHVQHEGLPK Unmodified 1467.6929 0.69288272 1147 E3UN97;A0A2I6J4B1;A0A1W1B5Q9;A0A1W1B5P4;A0A1D8MAR2;A0A455JTQ2;A0A1D3KYM1;A0A173ADK6;A0A0U5PXQ4;A0A7D5H2K1;A0A7R9KAH2;A0A7R9PSR9;A0A0S4XQY3;A0A4P2SS15;A0A4P2SSH9;A0A6B7FUX4;A0A6B7HGN6;A0A6B9MMF8;A0A6C0SH12;A0A6M4AA77;A0A2U3QLK0;A0A5H2UEZ4;A0A858LHP1;A0A2H4WPZ2;A0A1B1LKE5;A0A2P9FIJ6;Q95J07;A0A858LHN0;A0A7U3K2K7;A0A3G2LWQ6;A0A858BAV0;A0A060VD08;A0A060VHC2;A0A060VHD0;A0A858LHP8;A0A7S5GS05;A0A7S5GRV6;A0A7U3L8N8;A0A0D6K972;A0A7S5L7I4;A0A7T3P0T0;A0A1C3PHF4;A0A0S4XQW9;A0A0U5Q0S0;A0A7U3K2N3;A0A0S4XQY0;A0A1C3PH97;A0A1C3PH98;A0A1C3PHA9;A0A1C3PHC8;A0A1G4HQ08;A0A0S4XQX0;A0A858B942;A0A2U3QLP6;A0A7T3RIS7;A0A0N9HRK5;A0A7U3L8C6;A0A0U5Q1Q2;A0A0S4XQU8;A0A060VD16;A0A0D6K9K6;A0A0S2IKY1;A0A7U3K2H5;A0A0S4XQM2;A0A0S4XQP0;A0A0S4XQR6;A0A0K0TQ18;A0A7U3K2H2;A0A1C3PH91;A0A0S4XQR9;A0A7U3K2F1;A0A1C3PHH2;A0A7U3K2H0;A0A7U3K2G2;A0A7U3K2G0;A0A3G1Z2Q6;A0A7U3K2F2;A0A7U3K2I5;A0A0S4XQT2;A0A7U3K2B1;A0A0S4XQV7;A0A1C3PHF2;A0A1D0BSQ3;A0A1G4HPZ1;A0A1D3KYL9;A0A6C0SED3;A0A060VCY5;A0A7U3L8D9;A0A6C0SEA7;A0A6B9WHU5;A0A6B9WFF6;A0A6B9VUB6;A0A6B9KHB8;A0A0S4XRV2;A0A0U5PZ31;A0A858B8J5;A0A858B907;A0A7U3L8P7;A0A6B9KGV8;A0A3S6RI33;A0A3S6RI04;A0A858B925;A0A858B842;A0A6B9KNP2;A0A6B9VR84;X5MFD7;A0A6B9KAI8;A0A6B7HG58;A0A6B7HFR9;A0A6C1HWN0;A0A6C1HWM2;A0A6C1HWG8;A0A7U3L8N4;A0A6C1HWG5;A0A858B763;A0A7U3K2M4;A0A090KKC3;A0A7U3VI76;A0A6C1HWE5;A0A6C0VB37;A0A6C0TKS0;A0A6C0SGG6;A0A3S6RHQ5;A0A0S4XQX6;A0A6B9KFK9;A0A1G4HPZ0;A0A6S7YB88;A0A0S4XQY1;A0A1G4HPV3;A0A286RNI7;A0A1G4HPU6;A0A0U5Q331;A0A1D0C3Y2;A0A1G4HPY8;A0A0U5PU71;A0A1G4HPW4;A0A1D8MAN8;A0A1C3PHG3;A0A1C3PHG8;A0A1D8MAL2;A0A858B927;A0A1D3KYM2;A0A0U5PXI8;A0A0U5KK56;A0A0U5PYZ0;A0A0S4XRG6;A0A0U5PXL2;A0A0S4XR94;A0A858B956;A0A858LFL1;A0A858LGA7;A0A0S4XR96;A0A0S4XRD4;A0A858LGC0;A0A858LGT7;A0A0S4XRI5;A0A0S4XRI6;A0A0U5PXM5;A0A0S4XRT2;A0A0S4XRW0;A0A0U5IHK3;A0A0U5IHQ3;A0A2U3QLM4;A0A1L5LC12;A0A6B7KV80;A0A2P9FIN2;Q8SNC6;M4RMN4;M4R8V8;M4R8T6;D8MIW0;A0A286LDB0;A0A286RNH0;A0A090JY51;A0A286RNH2;A0A286RNH6;A0A286RNH9;A0A291HVI4;A0A291NGK6;A0A286LDB1;A0A223FL01;A0A858BAV9;A0A1Z1VXF7;A0A3S6RF48;U6ER51;W0HE66;B1PKY1;C5IWZ2;D5H3U1;D5H3U2;D5H3U3;D5H3U4;D5H3U6;D9UB11;A0A286LD90;A0A1W1B695;A0A286LD96;A0A8F5FV40;A0A286LD97;D7GM35;Q9GIP0;A9QVM4;A0A286LD98;A0A1G4NQS3;A0A1W1B663;A0A3S6RHP3;A0A1W1B5T2;A0A2K4Y3H1;A0A2H4ZAS3;A0A2K4N853;A0A2K4N814;A0A2I6SQU3;W8Y4A2;A0A2I6J4D9;A0A2I6J4A6;A0A7R9PTL5;A0A2I6J4D4;A0A7U3K2I6;A0A7R9PTI9;A0A7R9PT89;A0A2H4WPY7;A0A2H4WPW6;A0A2K4N860;A0A2I6J4B0;A0A7R9KAX6;A0A2K4Y3F8;A0A7U3K2I8;A0A2P9FIH7;A0A1S7SKC6;A0A291NGN0;A0A2D1CHG2;A0A125R6G4;A0A2H4UK40;A0A2P1CXW7;A0A2P9FII5;A0A2P9FIG8;D0V0C4;A0A2P9FIG5;A0A2P9FIF6;Q5MCQ6;A7MAP4;A0A2P1G6E1;A0PBY5;A0A167RN11;C5IWY0;A0A223PYB8;A0A223FLI6;F4NCR9;A0A3S6RFH2;A0A2U3QLH6;A0A2Z4C138;A0A330NMI6;A0A3Q9B4Q6;A0A3S6RFI0;A0A3S6RFH9;A0A2U3QLI6;A0A3S6RFD8;Q5SUL5;Q5S3G3;Q2LC93;Q2A689;A0A3S6RF85;X5MI15;A0A386IRN0;Q2A688;A0A2U8RNL0;A0A2S1B6U6;A0A2S1B6V2;A0A2U3QLL2;A0A2P9FIS3;A0A2U3QLQ4;A0A2U3QLM0;A0A2U3QLH8;A0A2U3QLI3;A0A2U3QLL9;A0A2U3QLL3;A0A2U3QLJ9;A0A2S1B6V5;A0A2U3QLI9;A0A2U3QLH4;A0A3S6RF33;A0A2S0SYS7;A0A2R3STY5;A0A2U3QLG6;A0A2S1B6V6;A0A8E4J507;A0A2P9FIR9;A0A2P9FIS9;M4QEH4;A0A345F0V2;A0A3G8GE10;A0A3S6RF29;A0A1S5UXJ4;A0A2P9FIP7;X5MPH3;I3ZN77;Q5ZGM8;X5MBH2;A0A8F5J0E1;A9YWM1;D9UB10;B2MVI0;B2R7U3;B6ETN7;C5IWX4;H2DMX5;X5LKD6;A0A346MPT7;A0A3S6RF59;A0A346MPT9;A0A346THJ1;A0A0D6K9L7;A0A375B7T7;A0A8G1LT45;A0A3G2LWU0;X5MFE4;A0A858LKF4;Q95HA5;A0A3G4R8Q7;A0A3G6IIS6;A0A3G6ILP0;A0A7U3K2M2;A0A7U3K2L8;A0A7U3K2K3;A0A7U3K2J7;A0A6B9KAH8;A0A6M8PV20;A0A7U3K2H6;A0A678ZWM0;A0A4P2SSM5;A0A4P2SSK8;A0A4P2SSI7;A0A5H2UF95;A0A678ZMH4;A0A678ZMY4;A0A678ZVJ3;A0A678ZVN3;A0A678ZW80;A0A678ZWL7;A0A678ZWM3;A0A4P2SSP6;A0A678ZZC3;A0A7R9PTI1;A0A678ZH97;A0A678ZZI0;A0A6B7FSY7;A0A6B7FT87;A0A6B7FTG2;A0A6B7FTH0;A0A678ZI33;A0A678ZZD8;A0A4P2SSN8;A0A4P2ST76;A0A678ZGZ9;A0A4P2STQ9;A0A4P2SRE5;A0A4P2SR70;A0A4P2SR52;A0A4P2SR01;A0A455JTM2;A0A678ZM25;A0A455JS07;A0A455JRX1;A0A411GA17;A0A411CX79;A0A4P2STU3;A0A5H2UHK1;A0A4P2SS00;A0A4P2SS53;A0A4P2SSE9;A0A678ZKK9;A0A678ZIN6;A0A678ZIC5;A0A678ZIA4;A0A5H2UI54;A0A5H2UHU6;A0A4P2SQV2;A0A5H2UYT5;A0A5H2UV00;A0A4P2SRS4;A0A2H4RK80;P04439-2;A0A6C0SGK5;Q6IV48;A0A678ZH37;B7ZAP7;A0A6B7FVE5;A0A0S4XRG0;Q29840;Q6IVJ5;A0A7U3L8M6;Q6IVJ6;A0A1Z2R893;J7SA67;Q5SRN5;A0A583ZB79;A0A583ZB34;A0A0G2JIF2;A0A3S6RFJ2;A0A3S6RHY6;A0A1W6C2M7;P04439;A7LB37;A0A5H2UIC5;A0A5H2UYR7;A0A5H2UIF3;A0A5H2UT43;A0A5H2UU86;A0A5H2UUF9;A0A5H2UUH1;A0A5H2UYZ3;A0A5H2UI71;A0A5H2UYJ8;A0A5H2UYK0;A0A5H2UYP3;A0A5H2UYS7;A0A7U3L8N3;A0A5H2UUW3;A0A678ZZE9;A0A5J6CZG2;A0A678ZH10;A0A678ZGT6;A0A678ZGN3;A0A649ZU83;A0A4P2STV7;A0A7U3L8J5;X5MI21;A0A4P2SRG9;A0A5H2UYS1;A0A5A4LK74;A0A7R9KAM5;A0A7R9KC42;A0A7R9KC32;A0A7R9KBA2;A0A1Z2R875;A0A7R9KB10;A0A7R9KAD9;A0A7R9KAX0;A0A7R9KAQ5;A0A6S7YP09;A0A4Y6GTZ7;A0A7R9KAK2;A0A6S7YTK2;A0A7R9KAI8;A0A7R9KAI7;A0A7R9KAG9;A0A7R9KAE6;A0A7R9KCP8;A0A7R9PSQ5;A0A6S7XX17;A0A6S7XX07;A0A6S7XU09;A0A6S7XTF4;A0A7R9KAV3;A0A6G7S6I1;A0A0S4XR33;A0A6B7HHT7;A0A238TQ66;A0A6B7HGN9;A0A6B7HGQ0;A0A6B7HGQ4;A0A6C0SGT3;A0A6B7HGN4;A0A6B7HGG7;A0A5H2UF78;A0A6B7IBZ7;A0A6B7HGN3;A0A6B7HGG8;A0A6B7HHU7;A0A6B7IDW6;A0A6B7HGE9;A0A0U5Q074;A0A6C1HXA0;A0A6B7IEM1;A0A6B7IFL7;A0A6B7IFQ5;A0A6B7KQ45;A0A6B7FWJ4;A0A6M5WPK7;A0A6G7S6J8;A0A7L7TX66;A0A6H0Y7F3;A0A6B7FU34;A0A6B7FTH7;A0A7L7TND1;A0A7L7TR54;A0A6B7FUZ8;A0A4V0NP68;A0A6M4EQQ7;A0A5A4LH43;A0A5A4LHD7;A0A7R8ND24;A0A5A4LIR8;A0A4P8D7F1;A0A583ZB21;A0A4Y7LIQ4;A0A5A4LJ79;A0A5A4LLH1;A0A5A4LTQ0;A0A5A4LTS8;A0A5A4M307;A0A5H2UEH6;A0A5A4LLE3;A0A5A4LLF6;A0A5H2UF23;A0A6B7FUW9;A0A5A4LI86;B4DVC4;A0A7R9PT76;A0A7L7TXC4;A0A7D3UWS0;A0A7D5DVF6;A0A7R9PSV1;A0A583ZB83;A0A7R9PSY4;A0A7G4RN38;A0A7G4WM27;A0A7L4X6X6;A0A7L4X795;A0A7R9PSZ4;A0A7L4X7E9;A0A7D7QND4;A0A4Y5WSJ0;A0A7L7TUL6;A0A6B7FVM4;A0A7L4X7H4;A0A7R9KB27;F6IQZ5;A0A5A4M334;F6IQX4;A0A5J6CX62;A0A4P2STA1;A0A5H2UF70;A0A5J6VAS1;A0A5Q5ADF6;A0A583ZAW1;A0A4P2ST16;A0A514QQ52;A0A4Y7LMX2;A0A5H2UV18;F6IQZ3;F6IQW8;A0A5A4LK96;A0A583ZB92;F6IQX7;A0A5A4LHG3;F6IQZ4;A0A5H2UUV9;Q29689;A0A5A4LJA0;A0A5H2UUG5;Q9MY51;A0A5H2UFF7;A0A5A4LLF0;A0A4Y5P8Y7;M9QZ33;A0A8F5FUX2;Q29907;C5IWY5;C9EIW0;F6IR15;C5IWY4;F6IQY1;F6IQX1;C5IWY3;F6IQZ6;Q708C4;Q9TQ74;E5FQ47;A0A8E4J3X0;X5D2K4;A0A3S6RF10;F6IQY0;D5H3U8;D5H3U9;D5H3V3;F6IR23;D9UB08;A0A7T8GEE8;A0A4Y5ULL4;A0A6S7XTY7;A0A7D5U624;A0A7G7XYK9;F6IQX0;B1PKY3;F6IQX6;D9UAY1;Q95J06;A0A649UPT4;Q8MGZ1;A0A3S6REZ3;A0A6M4C6H9;A0A3S6RFA8;A0A678ZVI9;A0A678ZVR7;A0A678ZH46;A0A678ZWD9;A0A678ZWE9;A0A678ZZG5;A0A6B7FT63;A0A6B7FTB7;A0A678ZKN1;A0A678ZGW5;F6IQZ0;A0A6M3YRX8;A0A6H0Y7A3;A0A6B7IE46;F6IQZ1;A0A6B7KQ33;A0A678ZVM5;A0A678ZVI4;A0A6M8PHV3;A0A678ZNU6;F6IQX2;F6IQY5;A0A6B7ICX9;F6IR10;A0A6B7HGP6;A0A6B7HGP5;D3YFD2;E1Y7G0;E1B2D6;E0YW13;A0A6B7HGK8;F6IQY8;A0A678ZVP6;A0A678ZLG1;A0A678ZM81;A0A6N0A1S6;A0A6B7HG31;A0A3S6RFC0;A0A649ZV15;A0A4P2SRY5;A0A4P2SRW8;A0A4P2SRR6;A0A4P2SRH7;A0A678ZGN8;A0A4P2SQZ3;A0A6B9VR96;A0A3S6RFH1;A0A455JVW4;A0A455JVN8;F6IQX3;A0A410JA26;A0A3S6RIB1;A0A4P2SQQ2;A0A4D6P079;A0A649XW30;A0A6B9VT42;A0A6B7HHR8;A0A4P2SR03;A0A6C1I636;A0A6C0THY7;A0A6C0SHE6;A0A6C0SGL7;A0A6C0SEA1;A0A6C0SE86;F6IQZ2;A0A6B9VTR1;A0A678ZGK2;A0A6B9RW39;A0A6B9MYT7;A0A6B9MYI0;A0A6B9MMH3;A0A6B9KAN4;A0A6B9HR00;A0A7R9PSY1;A0A0U5IHR8;F6IQZ8;A0A0U5Q0T4;A0A0S4XQU2;A0A0A8R645;A0A0S4XQV8;A0A0S4XQV4;A0A0G2R211;A0A173ADJ6;A0A0S1MSS0;A0A0S4XQP3;A0A858LHR6;A0A0U5Q1V3;A0A1C3PHA5;A0A2K9UYT2;A0A2H4RK91;A0A2H4WPX6;A0A2H4WPY0;A0A0S4XRI7;A0A109QAI7;A0A7R9KAL6;A0A109Q9J9;A0A858LH71;A0A858LNP5;A0A8E4J3N5;A0A0S4XQY5;A0A0S4XRV0;A0A0S4XRQ7;A0A0S4XRN8;A0A0S4XRM0;A0A0S4XRL3;A0A0S4XRH9;A0A0U5PUM0;A0A0S4XR73;A0A0S4XR02;A0A0U5Q086;A0A0Y0GTU3;A0A2H4WPZ8;A0A2H4ZAS9;A0A286LDA7;A0A090CXP3;A0A1W1B5W6;A0A1C3PHT5;A0A1C9UPQ3;A0A1W1B6J1;A0A386IRL1;A0A1C3PH90;A0A286LDA3;A0A223FL78;A0A223FL67;A0A223FL08;E0WN84;A0A223FKZ7;A0A1Z1VXF6;A0A1Z1VXE9;A0A223FL72;A0A1D8MAS0;A0A1D8MAP1;A0A3S6RHK9;A0A2Z5BTT3;A0A2P9FIT1;A0A2U3QLE8;A0A2U3QLG4;A0A2U3QLL1;A0A2H4ZAT7;A0A2U3QLL7;A0A2P9FIH2;A0A1D3KYH0;A0A286LDA6;A0A286LDA5;A0A286LDA4;A0A1C3PHB3;A0A346HFZ7;A0A1C3PHB5;A0A3G2Y4K4;A0A3G5BD46;A0A3G6V369;F6IR02;F6IQR9;F6IQS0;F6IR20;F6IR12;F6IR13;F6IR11;F6IR14;A0A7R9KD30;A0A7R9PTM2;A0A7L9VYC9;A0A7S5GRS2;A0A7S5GS66;A0A7S5GSM8;F6IR16;A8YQE6;F6IQX5;F6IQY2;F6IR19;F6IQW2;F6IQV6;F6IR22;F6IQV7;A0A7R9KAM7;F6IQW0;F6IQW1;F6IR09;F6IQW7;F6IQW3;F6IQW5;A0A7R9KAP8;A0A7R9KB37;F6IQV9;A0A7R9KCK8;F6IR06;E0WN91;F6IR00;A0A7S5L7R1;A0A7L7TMQ7;A0A7L7TRP2;F6IR03;F6IQZ9;A0A7U3K2D3;F6IR31;A0A858LGC9;A0A858B865;A0A858B753;A0A7U3L8Q2;A0A7U3K2K0;A0A7U3K2H1;A0A7U3L8I6;A0A7U3K2F6;A0A7U3K2E4;A0A7L7TMP1;A0A7L4X732;A0A7S5L7U0;A0A8E4NFK8;A0A8F5CF39;A0A7R9KAF6;A0A7R8V9S8;A0A7R8RJC5;A0A8E4NFJ6;F6IR04;F6IR05;A0A7U3K2C4;F6IR01;A0A8E7F1X6;A0A8F2EWC2;A0A8F2PMX5;A0A858LHL7;A0A7L4X6Z6;E0WN90;J7HDW9;A0A078BNH2;A0A1G4P1W1;A0A1P8SNL2;A6YT92;A0A1G4NR30;A0A1B1UZJ8;A0A1G4NQQ7;A0A1G4HPS6;A0A1D6ZNI8;A0A1C9LUP6;A0A1C3L6B0;A0A1B1UZK6;A0A1P7ZSR8;A0A1P7ZSS7;A0A2L2DGX7;A0A2P1CQD6;A0A286R107;A0A2D1WB98;A0A2Z6IEZ1;A0A343J4V7;A0A343J4V8;A0A2R4KZU9;A0A0S2UQ67;A0A3G8GE25;A0A1P8SNK9;B5A9M9;M9T819;A0SXS8;A0A143Y4R2;U5YMJ4;U5YMI9;U5YMJ8;U5YML8;U5YMP4;U5YMP9;U5YMQ3;U5YMQ8;U5YJJ6;U5YJK6;A0A385NKT9;A0A4P8VUH0;Q95IG4;A0A6G6CDI9;U5YJL3;A0A583ZAV5;A0A1Z1EGK5;W9AAG4;F6IR07;F6IR08;A0A7R8RJC0;A0A1W7IP21;E0WN60;A0A0F7DDK2;M4TCH1;A0A110BH75;C4PFW7;A0A142J2H9;M4X2U5;A0A125RL90;A0A110BIQ6;A0A110BIH1;A0A142J2I1;I6R2W1;M4VSN7;M4RCG9;A0A060GQ71;M4R8V2;M4NUQ2;A0A142J2I0;M4NJM4;A0A3G9H9G9;A0A3T1DFS0;A0A140CTI6;M5A8I6;M5EE32;Q3YBM1;A0A0S2C4N3;A0A0S1YF58;A0A0P0HDI3;A0A0N9R1U5;A0A060GTH2;A0A060N342;A0A076L0P9;A0A076V2L0;A0A0G3EHK9;A0A076V7U7;A0A077YIJ7;A0A078BPG3;A0A097F1T0;A0A097PED7;A0A0F7RPE2;A0A0H5CW52;A0A0H5CWT9;A0A0K2GVF7;A0A0N9E2I7;A0A0N9MQ43;A0A0H3WB50;A0A0N9QYF2;A0A0N9QYE2;A0A0N9QNI4;A0A0N9QYZ0;D5H3U7;D5H3U5;D0AB29;A0A076JS26;Q860B4;A0A0D6K9K8;A0A0D6K9D3;A0A6M8DJN3;U4PDP4;A0A0M7RFC2;A0A090KKK5;G0Z6Y6;A0A345F7A6;A0A076JXB7;A0A1W2PS24;A0A1V0EFF3;A0A0K2CWW0;Q5D1X1;Q0E7X7;A0A0G2JI36;Q6IVJ7;Q6IVJ8;Q6IVJ9;A0A345F7A8;A0A143Y4D5;A0A5B9QYU6;A0A7U3W2F8;A0A6B9HBN1;A0A5P8I434;A0A6M6AMD7;A0A7T3RIT5;A0A0D6K978;Q860B5;A0A7T8G1R7;Q7YPW4;C0KLT0;A0A142J2B1;Q861B7;A0A345F7A9;B7VF83;A0A650AP25;G9FTK2;W0HII0;A0A0D6K9L8;A0A0S2IIT2;A0A0F7NJH7;A0A2P1CQG7;A0A218N9T3;A0A649ZUY7;L8B934;A0A0D6K959;A0A8F4GDW7;A0A1V0EFF9;U5YJQ7;U5YKF4;U5YME5;U5YMF0;U5YJL1;D5H3V9;U5YKF9;A0A1D3TZM3;U5YMI0;U5YMI4;D5LN74;U5YKG4;U5YJK1;A0A1V0EFI3;U5YJH0;B1PT16;A5PHT7;U5YKC8;A0A866W2Z2;D5H3V8;U5YJP8;A5PHP7;U5YJQ0;U5YJQ4;U5YKG9;D9UAY2;D9UAY3;A0A4P8D7G8;A0A1V0EFG6;A0A1G4HPU0;A0A0A1EAW8;Q5SRN7;A0A143Y239;Q14SN2;Q2L4F0;A0A5P8I410;A0A6M6CC39;Q6IUZ4;A0A0U5LBS5;W5ZPB5;A0A0K3AQ92;Q0E7X3;A0A060VCY7;Q5ND69;A0A583ZB55;D6CIB9;D6CIC1;A0A1Z2RP28;D6CIC0;M5ETC1;M9TIT3;D3JW65;A7MAK2;A4GWZ0;A4GWZ1;A0A7T6AP80;A4URG8;Q9BCN8;E3Q0X4;A5PHT4;A5PHT9;A7L858;A7MAE2;A7WPI8;A2VBZ7;F2XI30;G8ZKX4;C7C695;C7C6D3;C7E539;E7BJ52;E9ABX3;F2XI28;A8E0Y3;A9QUT7;A2VC06;A2RQE0;M9TNT6;B0FWH0;B6VA01;B6VA02;B7VBV1;B9VJL7;C0MP56;C1KBJ6;C6H0N6;C6H0N8;B1Q4X2;C6L836;A9IW15;A2Q117;C3VAL4;A0A4P8L8W6;A0JHM7;A0A514YDS8;A0A514YDT1;A0A5H2WUX1;A0A5J6BTF9;A0A6C0TJ32;A4URF2;A0A4Y6GU97;F2XI31;F2XI33;Q9TQP8;D1MZT7;C7EW70;C7EW71;C7U1K2;C7U2Z0;E3WH33;G9FTJ8;D0VFI1;D5H3W2;D1MYY8;D1MYY9;D2KZ53;G8FV57;D2KZ55;I1U8N0;A5I8L2;D0W032;D5H3W3;D6CIB2;D6Q0R2;D9UC12;E0WMN1;E0WN57;C7ENH9;E2G792;D0RB02;C9E9Y0;G8FRJ5;G8FQ53;G4V593;G0UE14;F2XI32;G0M6G1;F8LSY2;F8LSV3;F8LSV2;F5CIU1;F2XI35;F2XI34;F8T1H2;A0A0F6SCZ8;G9DBG6;H2D5G2;H2DEU0;H6SSQ0;H9C3L3;I0DFI9;E7BBA1;B6ECH6;B6ECH3;B6ECH2;J7JGT4;Q2PP85;I1VXL8;L7UVL0;L7QJU3;L7QJ97;L7QJ95;K7SHJ4;W6CHX3;J7SBK9;J7JHS1;J7I2U3;L7V338;J7HGX9;F6IQW9;L7X986;L7Y4K8;M1KDJ9;Q6AW25;W6CGW3;W0G8I7;W0FBM8;V5V1E3;Q4W6C0;I6QYX3;I6M4H5;I3Y3J5;N1NRX6;Q4W5U0;Q0E7X5;Q0GC70;Q1EJP6;Q1EPW2;Q25BN7;Q4A1H0;I7H3R1;I7B4Y2;I6R2V6;M5EFF5;Q4ZG93;M1LMH3;Q5NTA9;M1KE04;M1K8H4;I2GUK1;I2E8C4;I3TBB8;I3VB21;V5L1W2;U6BZQ8;B2DFW8;B1Q4X5;R9WYX8;B3VE20;R9UTP9;R9UR01;R7RVB7;R7RV73;R4NJ42;R4KXX0;I1U8N1;I0DHJ2;B3VE19;T2MJM6;B3IYE6;B2ZRD4;B2NJ13;A0A6B7HGP2;B2NIY8;B2DFW7;B2DFV0;B2DFH6;B2DFH5;B2DFH4;S0F2B1;S0F2B5;S0F2B7;Q95IG6;T2BQE4;S6B3R2;Q6F3E3;Q6F3E2;U3R9Y1;K7W4U9;W6CJ57;W6SIV4;S5U3G8;X2J8Y7;X4YT82;X5EM81;S4VA55;S5CRT1;I7HCZ5;W8NKP1;Q6L675;Q8HWT0;A0A6B9VTX5;S0F2I4;Q8MGZ8;F6IQW6;A0A2H4WPY5;A0ZXY8;A0A3S6RIB2;A0A5H2UEP3;A0A223PYD8;A0A678ZGM1;A0A1W1B5M6;A0A1D8MAN3;A0A0D6E067;F6IR24;F6IQW4;F6IQZ7;A0A6B7FWW8;A0A286RYQ4;A0A5H2UYS3;A0A410P8C3;A0A3G2FPD9;A0A3G5BD32;Q0MSI1;F6IR32;A0A6B9HSD8;A0A4U9C372;I2GAD6;A0A6F8Z9L3;A0A7S9C280;A0A7S5GSJ7;A0A2K4ZRK0;O15506;B4DVB9;A0A060VCW6;A0A060VCX2;D0W033;A0A3G2LWR5;A0A0F7W082;A0A8F4G8X1;X5MBH7;A0A060VCZ3;L8B936;A0A411J078;A0A583ZAY5;A0A060VD10;A0A060VCY6;B7ZA80;A0A181C4Z2;A0A3B0PDB1;A0A8F4GAB4;A0A583ZB89;D2KZ37;A0A8F4JG78;A0A866VWG0;A0A060VCZ1;A0A1W2PQD0;Q2L4E7;A0A060VG42;A0A8F4G6S8;A0A1D8QKY3;A0A8F4G6Q4;E7AJF9;A0A090MEX8;O19689;A0A387LBR7;A0A1W2PSE7;Q59GJ2;A0A0G2JL56;A0A8G1LSM1;A0A4V0NP52;A0A678ZWL4;B4E2X4;A0A4P8VYK0;A0A6B7FTE9;A0A7D7QGZ4;A0A8E4NFK9;A0A8E4J527;V6CKU4;A0A678ZN67;A0A5A4M351;A0A0F7NGH0;A0A7T3RIP7;A0A410P7W7;A0A3S6RF15;I4EPX9;A0A3S6RF24;A0A493QP44;A0A678ZGZ8;A0A5H2UYX2;A0A678ZI24;Q546B1;A0A678ZIR9;A0A6C1I9H9;A0A5H2V1G4;A0A6B9WFI1;A0A6C1HWD9;A0A678ZIV9;A0A678ZIV2;A0A6M8DNF6;A0A6C0MAN1;A0A6C0RRE3;A0A6C0SHD4;A0A6G6C3T0;A0A6C0TE73;A0A6C0TH04;A0A6C0THE4;A0A6C0THI8;A0A6C0THZ3;A0A6C0TIQ6;A0A678ZN76;A0A6C0W8C8;A0A6C0SGB2;A0A6C0SE99;A0A678ZJ28;A0A6C0SE77;A0A6C1HWI2;A0A6C0SDK7;A0A6C0RRX8;A0A678ZH09;A0A6C2E453;A0A6C1HZ89;A0A6B7HG67;A0A6C1I5T6;A0A6C1HXB7;A0A6C1HXA1;A0A5H2UZ78;A0A6C1HX87;A0A6C1HWP4;A0A6C1HWJ0;A0A7L7TUN9;A0A7L7TX95;A0A5H2UZ70;A0A6C1I5V6;A0A346FLI0;Q29932;A0A6B7HFW0;Q29637;A0A5H2UZ44;Q1JRH1;Q1M2R9;Q1M309;A0A5H2UZ51;A0A2I8B370;A0A6C1HXJ4;A0A6C2E459;A0A5H2UUW4;A0A649ZUV8;A0A6C0SH00;A0A6C2E3Q7;A0A6C2E140;A0A6C2E0X0;A0A678ZJ03;A0A678ZIX0;A0A5H2UUV5;A0A6C1HWH2;A0A5H2UZD2;A0A6C1HXL7;A0A6C1I600;A0A6C0SE68;A0A6C1HXF0;A0A5H2UZB1;A0A6C1HZB6;A0A6C1HYJ6;A0A6C1HWI3;A0A5H2UZ80;A0A6C1HXN5;A0A6C0SHC7;A0A6G7NQD3;A0A6C0SGX4;A0A6G7S6G2;A0A6M8PDX3;A0A6H0Y8J8;A0A678ZP39;A0A6S7YTP9;A0A6M4RVV9;A0A6M4C6E8;A0A6M3W7R4;A0A6M3W7Q8;A0A6H0YXU1;A0A6H0Y8K8;A0A6M8DY28;A0A6H0Y7T8;A0A6S7XUL2;A0A678ZP18;A0A6B9WEW4;A0A6G8QHX7;A0A6B9VUR2;A0A6G8IR14;A0A6G7S733;A0A678ZN19;A0A678ZP61;A0A678ZP73;A0A678ZHW3;A0A6S7XSP1;A0A650AB56;A0A678ZI07;A0A6S7XTJ7;A0A6B9VUS8;A0A678ZHX7;A0A678ZI17;A0A678ZH44;A0A678ZPD6;A0A6M8PL03;A0A678ZPB0;A0A678ZH60;A0A678ZH83;A0A678ZHA1;A0A678ZHA3;A0A6N0A4J6;A0A6N0A228;A0A6M8PL08;A0A6G7S6I3;A0A6S7XTG4;A0A6C0SGI7;A0A6B7IEZ8;A0A2I8B371;A0A6S7XXL9;A0A6S7XWX3;A0A6C0TGR7;A0A6G7NU37;A0A678ZMZ1;A0A6S7XV67;A0A6S7XUS7;A0A5H2UVM3;A0A6S7XUQ9;A0A678ZM99;A0A678ZJD6;A0A6S7XUQ0;A0A6S7XUN3;A0A6S7YTL5;A0A6C2HEL2;A0A678ZJB3;A0A6C0SGE8;A0A678ZJ95;A0A678ZJ81;A0A678ZNL0;A0A6S7YNS6;A0A6V6XY92;A0A6G9W189;A0A6G9EBV7;A0A6S7XU17;A0A6V6XYB1;A0A6V6XYA5;A0A6V6XYA3;A0A678ZNW3;A0A6V6XYA0;A0A6S7YTQ9;A0A678ZNM9;A0A6S7YTN9;Q5HYL2;A0A6S7XXG3;A0A6S7XX38;A0A6S7YP46;A0A6S7YNU8;A0A6S7YNT9;A0A678ZNU3;A0A5A4LLR2;Q2YHR9;Q1RPB8;H6X1W9;Q7YNX1;Q70Q11;Q70Q09;Q70CQ0;Q6KEQ1;Q6H8L0;C6K6H8;S6FC63;X5M233;S6EYQ3;A0A858B7M8;W0NSR9;X5MK36;W8YMX3;S6FC68;W0UTQ9;W0NWG3;V9HVZ9;V6E0U6;V6DZ79;V5NX26;S6F453;Q7YQ88;Q7YQB0;S6BVK3;I3QHX6;I3RQ46;A0A6S7XTM0;Q5QT34;A0A6B9VSH5;Q860I6;Q5TK75;Q9UIP6;Q9TPW6;S6AU73;Q860I5;S4VE60;R5A1K5;Q9MYI6;Q860I7;Q9MYC0;Q9MY33;Q9GIX2;Q96DW9;Q95346;S6FM58;S6FM53;C6K6I4;A0A858LH02;A0A858B8W0;A0A858B6V2;A0A7T8R2K5;A0A858B8U6;A0A7U1GEW3;A0A7U3NN61;A0A7U3TLF8;A0A7U3VI85;A0A858B6R1;A0A858LGZ1;A0A858LH39;A0A858LGY4;A0A858BAP7;A0A858LGV8;A0A858LGP0;A0A858LGL9;A0A858LGH1;A0A858LFT2;A0A858LFN6;A0A7U1BDA0;A0A858LHA3;A0A858LH30;A0A7L7TXA5;A0A858B8V8;Q5SS57;A0A858B8N7;A0A858B8C0;A0A858B8T6;A0A858B8T4;A0A858B8R5;A0A858B8Q0;A0A858B8P9;A0A858B8A9;A0A858B7L9;A0A858LH10;A0A858B889;A0A858B840;A0A858B7V0;A0A858B7U1;A0A858B7Q0;A0A858B8U9;A0A858B6W0;A0A858B6S0;A0A858LH09;A0A2I8B363;H6VGI9;Q1RPB9;G9FS21;P79549;P79612;Q08GE3;A0A6C1HXG7;Q52S25;D7GM37;A0A5H2UUX3;Q3ZV43;Q3ZUB3;Q3LRR5;Q3BK34;Q31602;Q306W0;O19755;Q52QV7;Q2YHR8;Q2L6G2;Q29985;Q29981;Q29943;O78189;O78218;Q29911;Q29938;Q29844;Q1ZZH2;Q29644;O19790;Q29669;Q29700;A0A678ZHD5;Q29705;Q29748;Q29767;Q0VJ75;Q29941;Q0EFB2;Q08GE4;Q546C9;Q546I9;Q546J0;Q546P4;Q549W0;Q54A64;Q29849;Q30172;C6K6H9;Q52QV6;I4ENP1;O19554;G9FS20;A0A678ZHD7;E7CRP1;E5FQ95;C6K6I6;C6K6I7;C6K6I8;C6K6I9;I3ZN84;M4QFU4;I3ZN83;F4YTD1;F8TR68;G0VL32;G0ZG53;G4XN19;G5DSS2;C6K6J0;G7ZKB5;M9WKA6;K7SRB3;D5L9K0;D2IYK1;E5FQ93;E5FQ58;E5FQ57;D9UB13;D9UB12;D9J307;E7CRN8;E5FQ94;D5H3J5;D0EKP3;I7LR87;C9E399;C7FNH8;C7EXL9;C6K6J5;C6K6J4;C6K6J1;F4YTD0;I4ENP2;I6QS32;A0A6B7IF45;A0A5J6CX16;A0A5H2UZ50;A0A6B9VTZ7;A0A223FKW4;A0A386RW46;A0A386RVU2;A0A0S2IIQ9;A0A6B7KV52;A0A386RUJ7;W0UTP4;Q861E7;A0A6B9VTX1;A0A6B9VU45;A0A6B9KAL8;A0A6B9VU91;A0A6B9VUA2;L8B932;A0A6B9VUA9;A0A6B9HQY7;A0A0S2IIV1;A0A5A4LKC4;A0A346FLH9;A0A678ZPM1;Q9GJ43;A0A6B7KVC4;A0A6B7KXI8;A0A6B7KYU3;A0A5Q0QGD1;A0A6B9HD56;A0A6B9HN98;A0A6B9HP03;A0A6B9HP17;A0A6B9HQP9;A0A5J6MBG1;A0A6B7KQ96;A0A6B9HQR7;A0A6B9HQX9;A0A7D9AMQ8;A0A0S1Z204;A0A7D9AMW9;A0A7D9FYU1;A0A1S6Q4A9;A0A7G7Y1V2;A0A6B7L1K4;A0A6B7L1J2;A0A6B7KYU6;A0A6B9KHS9;A0A6B9IXC2;A0A678ZZN0;A0A6B7HFK3;A0A678ZX96;A0A6B9VRZ1;A0A678ZX92;A0A6B7HFS9;A0A678ZX90;A0A678ZX85;A0A678ZX84;A0A6B9VRQ1;A0A678ZZN5;A0A6B9VRK8;A0A6B9VRG3;A0A678ZXB4;A0A5H2UUM6;A0A678ZZZ1;A0A6V6XYB2;A0A6B7IIE7;A0A5H2UUL4;A0A678ZXB8;A0A6B7HFJ3;A0A3S6RFU3;A0A6B9VS30;A0A6B7HFJ9;A0A678ZXA6;F8T958;A0A3S6RI19;A0A061DD14;O19642;A0A7D9FZ80;A0A6B7KV78;A0A6B9VSY7;A0A2I8B364;A0A4P2SSK0;A0A6B9VRJ7;A0A061DEB5;A0A346HG02;A0A678ZX55;A0A2I8B365;A0A2I8B367;A0A2I8B368;A0A6B9VRJ5;A0A6B9VSE7;A0A0S1Z1X8;A0A5P8I429;A0A6B9HBP5;A0A0S4XQY4;A0A0S4XQW8;A0A4P8JGQ9;A0A223FL90;A0A223FL85;A0A223FL14;A0A223FL07;A0A0U5IHM5;A0A223FKX1;A0A7D8ZZS1;A0A223FKY8;A0A142J2B4;A0A2H4ZAU7;A0A0U5PZ65;A0A220IGB9;A0A218NI37;A0A212MH17;A0A4P2STY4;A0A0U5KJ66;A0A7D9FXB9;A0A142J2H5;A0A223FLI8;A0A0U5KJ30;A0A4P6N0H4;A0A1Z2RTQ8;A0A1Z2RTN7;A0A1Z2RTL3;A0A0U5PZ83;A0A4P8DJ78;A0A4P8DJ99;A0A6B7IIK8;A0A4P8DJP6;A0A7D8ZZI8;A0A0U5Q047;A0A0S4XQW5;A0A0S4XQV3;A0A0U5Q0A7;A0A1Z2RTK7;A0A0U3A4R9;A0A0U5Q035;A0A2H4WPX0;A0A4P8DJR2;A0A2H4ZAU2;A0A0S4XQX3;A0A223FKV7;A0A1Z2RTQ9;A0A7D9BUL2;A0A7D9BUK9;A0A7D8ZZT6;A0A6V6XYC3;A0A6C0SGD6;A0A6V6XYB4;A0A7D9BVC8;A0A7D9BVP2;A0A6C0SGQ9;A0A0U5Q0A6;A0A1W6C2K7;A0A7D9AMS5;A0A6C0SDI7;A0A7D9BUK7;A0A0U2S4I2;A0A6B7KR20;A0A3S6RF03;A0A6B7KR09;A0A6B7KQ98;A0A6B9HQ54;A0A6B7L1K9;A0A1V0EFF1;A0A7D9BUL4;A0A7D9BUN5;A0A8F4JDU3;A0A7D9BUN1;A0A7D9BUM3;A0A0U2XL24;A0A1V0S7J8;A0A7D9BVE7;A0A1V0EFF2;A0A7D9BUM2;A0A8F7GNN8;A0A223FKW9;A0A2H4WQ08;A0A291NMV1;A0A1S6Q4B3;A0A8F4G8Y5;A0A142J2H4;A0A142J2H3;A0A142J2B6;A0A866W0W2;A0A142J2B5;A0A142J2B3;A0A678ZXE9;A0A6B7FV78;A0A6B7IF66;A0A6B7FTJ1;A0A6B7FWV1;A0A6B7FWU0;A0A6B7IHH9;A0A6B7FTJ7;A0A6B7FTL0;A0A6B7FWM3;A0A6B7FWL9;A0A6B7FWL2;A0A678ZPN5;A0A6B7FTJ2;A0A5H2V1W4;A0A6B7FWQ4;A0A5P8I423;A0A6B7FTH5;A0A5H2UUQ7;A0A678ZMW1;A0A678ZPE7;A0A6B7IHE7;A0A5H2V1L9;A0A5H2UUR3;A0A679A032;A0A6B7FTG8;A0A6B7FWV3;A0A6B7FTG5;A0A6B7IH80;A0A6B7IH53;A0A679A092;A0A6B7FWK4;A0A6B7IHT6;A0A6B7FVU9;A0A6B7FTR7;A0A6B7FTL1;A0A6B7FVN8;A0A6B7FV63;A0A6B7FV58;A0A6B7FV44;A0A6B7IHR4;A0A6B7FV38;A0A6B7FV36;A0A6B7FTL2;A0A679A0P9;A0A679A0S1;A0A6B7FWV6;A0A5H2V1W1;A0A6B7FV64;A0A678ZQM4;A0A5H2UVF2;A0A5Q5AD11;A0A5Q2UQT1;A0A5Q2U7C7;A0A5Q0TQW7;A0A5H2UZF0;A0A6B7HG94;A0A5H2UYV6;A0A5H2UZ63;A0A5H2UZ24;A0A6B7IG06;A0A6B7IHC4;A0A5H2UVC7;A0A5H2UZ28;A0A6B7IFA7;A0A5H2UVB6;A0A5H2UYW1;A0A649ZUD8;A0A5H2UVA0;A0A5H2UUY3;A0A2I8B373;A0A649ZU72;A0A649ZUA0;A0A2I8B374;A0A2I8B369;A0A5H2UYU2;A0A5H2V203;A0A858B9B2;A0A5J6SHU5;A0A5J6VB00;A0A5J6WEK8;A0A5J6WGH8;A0A5H2V1Z6;A0A6B7IGX1;A0A5H2UUP3;A0A5P8I435;A0A5P8TXU3;A0A6B7IE43;A0A5H2UUT4;A0A649ZUJ4;A0A5H2V1L5;A0A649ZUI8;A0A649ZUG0;A0A649ZUE7;A0A6B7HG99;A0A6B7IHU4;A0A6B7IHY3;A0A6B7HGD5;A0A6B7ICY7;A0A678ZX31;A0A6B7HHP1;A0A678ZW11;A0A678ZW32;A0A6B7HHM5;A0A6B7HHM4;A0A678ZW39;A0A6B7HGH2;A0A678ZW50;A0A6B7HG92;A0A6B7IDY2;A0A6B7HGG3;A0A6B7HGF4;A0A679A011;A0A678ZVW0;A0A6B7HGF3;A0A678ZWY6;A0A678ZWZ1;A0A678ZWZ4;A0A678ZVX4;A0A678ZW88;A0A6B7IDS0;A0A6B7HHK1;A0A678ZVT8;A0A678ZPP7;A0A6B9VRF0;A0A6B9VR91;A0A678ZQI1;A0A6B7HFU3;A0A678ZQJ6;A0A6B9VR31;A0A678ZQK2;A0A6B9V3S8;A0A6B9KKX1;A0A678ZQK7;A0A678ZX39;A0A678ZW20;A0A678ZVU7;A0A6B9VUF3;A0A6B7IDU8;A0A6B7HGD2;A0A6B7HHL6;A0A678ZX03;A0A6B7HGE5;A0A678ZX04;A0A6B7FU61;A0A6B7FTS6;A0A6B7FTQ6;A0A679A0N2;A0A5H2UU12;A0A6B7IDX7;A0A6B7FTP4;A0A6B7FTM9;A0A6B7FVU2;A0A6B7FTL9;A0A6B7HG78;A0A6B7FTL3;A0A6B7FUE6;A0A6B7HG79;A0A6B7FVS2;A0A6B7HG91;A0A6B7FUF4;A0A679A0I6;A0A6B7FWW6;A0A679A0E9;A0A6B7FTT3;A0A6B7IE13;A0A6B7HGE4;A0A6B7IHW1;A0A6B7KQ77;A0A6B7HGC9;A0A678ZX15;A0A482M0B0;A0A6B7IE31;A0A6B7IHZ0;A0A6B7II51;A0A6B7II66;A0A678ZW56;A0A678ZX22;A0A6B7II80;A0A679A050;A0A6B7IIA8;A0A6B7FWP0;A0A6B7FUD1;A0A6B7IIB4;A0A6B7IIE1;A0A6B7FVS8;A0A6B7FUB6;A0A7S5GS38;A0A7M1IEI8;A0A858B9A3;A0A678ZHL8;A0A583ZBU8;A0A678ZHP2;A0A583ZBS5;A0A583ZBT2;A0A583ZBT3;A0A583ZBU0;A0A4D6P130;A0A4P8P9M6;A0A5A4LHA5;A0A4Y7LMT4;A0A583ZBU7;A0A4P2SR34;A0A4P2SR22;A0A4P2SR16;A0A4D6Q6M7;A0A583ZBU6;A0A5A4LHD1;A0A4P2SRA5;A0A583ZBE1;A0A583ZBQ6;A0A4Y7LMH8;A0A678ZHR0;A0A4Y5QVM4;A0A3S6RFP8;A0A678ZHG5;A0A678ZHU1;A0A4Y5P9Y0;A0A678ZHS5;A0A678ZHR4;A0A4Y1YQ62;A0A4V0NP84;A0A4Y5R168;A0A4V0NP82;A0A4V0NP79;A0A4P2SRT3;A0A4V0NP75;A0A4P8PAN2;A0A4P8PAC0;A0A4P8P9N1;A0A4V0NP81;A0A4P8DJY3;A0A4V0NP78;A0A4Y5R161;A0A4Y7LLR5;A0A583ZBQ2;A0A583ZBM7;A0A583ZBM5;A0A4P2SRI7;A0A4P2SSF3;A0A4P2SSG8;A0A4P2SSI1;A0A4P2SSI8;A0A3S6RFQ0;A0A4P2SRX5;A0A4P2SR62;A0A4P2SRN4;A0A4P2SRM1;A0A4P2SRI2;A0A583ZBJ9;A0A4P2SRG6;A0A678ZHF8;A0A4P2SRT9;A0A4P2SRU7;A0A4P2SRF6;A0A4P2SRD4;A0A4P2SRC7;A0A4P2SRC5;A0A4P2SRC0;A0A4P2SRV3;A0A4P2SRA0;A0A4P2SRD5;A0A4P2SSE0;A0A583ZBE6;A0A4P2SR38;A0A583ZBS2;A0A583ZBC7;A0A583ZBB4;A0A4P2SR48;A0A583ZBA5;A0A514TNJ1;A0A4P2SR55;A0A4Y7LMV5;A0A4P8DJW0;A0A858LHX2;A0A4P2SS16;A0A4P2SS35;A0A4P2SSD3;A0A4P2SRY1;A0A4P2SRZ4;A0A4P2SS01;A0A4P2SS07;A0A678ZHE9;A0A4Y5RYD0;A0A858B970;A0A2U3T1L7;A0A2U3T1L2;A0A2U3T1K9;A0A2U3T1L3;A0A2I8B3D0;A0A2U3T1L9;A0A5H2UFC1;A0A5H2UF92;A0A5H2UF63;A0A2I8B3C9;A0A5H2UI21;A0A2I8B3C6;A0A2U3T1L1;A0A5H2UFL4;A0A5H2UFN0;A0A2I8B379;A0A2U3T1F9;A0A5H2UFS0;A0A2I8B377;A0A2U3T1G2;A0A2I8B384;A0A2I8B3C8;A0A2I8B3B8;A0A678ZHY7;A0A2U3T1K4;A0A2U3RU34;A0A2U3RUC9;A0A5H2UI55;A0A2U3T1J4;A0A2U3T1J2;A0A5H2UFI3;A0A5H2UFH7;A0A5H2UFF4;A0A2U3T1J3;A0A2I8B3A4;A0A2U3T1K7;A0A2U3T1M0;A0A2I8B3A5;A0A2U3T1J6;A0A2I8B3B5;A0A2U3T1K1;A0A2U3T1K2;A0A2U3T1J5;A0A5H2UFJ2;A0A2U3T1K3;A0A2I8B381;A0A2I8B378;A0A2U3RUD5;A0A4Y7LIS6;A0A5H2UFZ6;A0A2I8B3A3;A0A3S6RFN3;A0A4Y5RYN8;A0A4Y7LKV9;A0A4Y7LKV2;A0A4Y7LK17;A0A4Y7LJE1;A0A4Y7LJC8;A0A678ZH75;A0A5H2UG01;A0A4Y7LIQ6;A0A3S6RFP6;A0A4Y5UYF1;A0A4Y5US89;A0A4Y5ULZ5;A0A4Y5ULW8;A0A4Y5ULJ4;A0A4Y5ULH0;A0A4Y5T9E2;A0A2U3T1I8;A0A2U3T1I5;A0A5H2UFV6;A0A2I8B3A1;A0A2I8B376;A0A5H2UFS8;A0A2U3T1F7;A0A2U3RUE0;A0A5H2UFW4;A0A4Y5QYY1;A0A2I8B386;A0A4Y7LL60;A0A2U3T1I4;A0A2I8B398;A0A2U3T1G5;A0A2U3T1H4;A0A2U3T1H9;A0A2I8B390;A0A2U3T1I1;A0A2I8B399;A0A2U3T1J1;A0A2I8B385;A0A2I8B3A0;A0A4P2SRB8;A0A4P2SRE7;A0A4Y6JLR3;A0A2P0W8U9;A0A3S6RFT0;A0A482GS04;W0NW49;A0A4D6NWA3;A0A3S6RFS4;A0A2P0W8F7;A0A493QP64;A0A499S0B6;A0A4D6G103;A0A2P1CQC7;A0A3S6RFT1;A0A5A4LM29;A0A3S6RFT5;A0A2P1CXW3;A0A5A4LII1;A0A4D6NXH8;A0A4D6NYY6;A0A3S6RFT4;A0A5A4LHM3;A0A3S6RFT2;A0A5A4LJK5;A0A5A4LKM0;A0A4P2SSJ6;A0A455JVS9;A0A5A4LII7;A0A455QZK9;A0A455JWZ9;A0A5H2UIL7;A0A5A4LIJ8;A0A3S6RHZ0;A0A678ZPC4;A0A455JVR2;A0A455JVS7;A0A455JVT3;A0A5A4LJ28;A0A5A4LKN6;A0A5A4LJ18;A0A455JVZ8;A0A4P2SSM6;A0A482GNH6;A0A455JVX4;A0A5A4LJF8;A0A455JVZ1;A0A5A4LJ60;A0A3S6RFS3;A0A5A4LLZ7;A0A3S6RFQ3;A0A2P0W8F1;A0A2K4XH25;A0A2K4XH18;A0A5A4LLX7;A0A493QP59;A0A5A4LLU4;A0A5A4LLR9;A0A3S6RFV1;A0A493QP54;A0A493QP51;A0A493QP60;A0A5A4LLP9;A0A455JVG2;A0A455JU85;A0A3S6RFQ6;A0A5A4LLQ2;A0A3S6RFZ3;A0A3S6RFX3;A0A3S6RFW9;A0A3S6RFW4;A0A3S6RFU2;A0A482LWZ5;A0A455JVH5;A0A5A4LLZ2;A0A3S6RFV9;A0A3S6RFR5;A0A3S6RFR2;A0A3S6RFR1;A0A3S6RFR0;A0A5A4LHH0;A0A3S6RI12;A0A4D6NZ50;A0A3S6RFV0;A0A2P0W8E9;A0A5A4LHG5;A0A493QP63;A0A2P0W8F3;A0A2P0W8E6;A0A2L1K3Z3;A0A5A4LHN1;A0A2L1K3Y8;A0A2K9UYV2;A0A2K4XH82;A0A3S6RFV3;A0A455JW09;A0A455JWY3;A0A455JWZ6;A0A4P2SSU4;A0A4P2STE3;A0A4P2STD2;A0A4P2SSZ7;A0A4P2SSX2;A0A2P1G6E3;A0A4P2STI8;A0A4P2SR80;A0A4P2SSW1;A0A4P2SSV3;A0A4P2SSU2;A0A3S6RIH2;A0A4P8DJ86;A0A4D6P104;A0A4D6P091;A0A3S6RIC8;A0A3S6RIF9;A0A3S6RI27;A0A3S6RI29;A0A3S6RI47;A0A3S6RI51;A0A4P2STH2;A0A2P1FZJ4;A0A4P2SSX8;A0A4P2SR71;A0A3S6RIF7;A0A4P2SU57;A0A4P2SU59;A0A4P2SU63;A0A4P2STM2;A0A4P2STZ6;A0A4P2SU00;A0A4P2SU32;A0A4P2SU76;A0A4P2STK9;A0A4P2SR63;A0A4P2SSS7;A0A4P2SU87;A0A4P6MY22;A0A4P8DJ75;A0A4P8DJ76;A0A3S6RII6;A0A4P2SR69;A0A3S6RI15;A0A3S6RIC4;A0A5A4LHE7;A0A2K4U854;A0A455JVI5;A0A455JTR8;A0A678ZHJ8;A0A678ZHJ5;A0A678ZHI8;A0A678ZHI6;A0A4P2SR83;A0A678ZHH8;A0A678ZHH5;A0A678ZHJ9;A0A4P2SRB3;A0A3S6RID2;A0A455JVQ6;A0A481Y760;A0A481MTJ7;A0A2K4XGC5;A0A2K4XG97;A0A2K4XG70;A0A455JW03;A0A5H2UTY4;A0A455R0H3;A0A455JS58;A0A455JU59;A0A455JU53;A0A455JTT8;A0A3S6RID8;A0A3S6RIE1;A0A3S6RIE7;A0A3S6RIF0;A0A3S6RIF2;A0A3S6RIH7;A0A4D6NZ61;A0A1Z2RTP1;A0A3S6RII7;A0A3S6RIJ5;A0A3S6RIJ6;A0A3S6RIL4;A0A411E080;A0A3S6RII1;A0A3S6RID6;A0A455JS51;A0A455JTS5;A0A678ZHK9;A0A455JTT0;A0A2U3RU30;A0A2U3RU24;A0A2U3RU19;A0A858LJU7;A0A890UQ00;C5MK53;A0A890UYD3;A0A891XJI1;A0A891XJM4;A0A896SZ64;A0A896SZ70;A0A8E4NGQ5;A0A8E6YHT1;A0A858LJT8;A0A858LNZ2;A0A858LHX7;A0A858LHR9;A0A858LHR2;A0A858LHV8;A0A858LHV6;A0A858LHV0;A0A858LHU3;A0A858LHU2;A0A896SZ71;A0A890UKC4;A0A858LNW2;A0A346D3U7;A0A890UYQ6;C5MK54;C5J400;C1KES8;C5IUS6;C5IYE8;C5J3Z7;C5J3Z8;C5J3Z9;C5J405;C5J406;A0A858LKK1;C5J407;C5MK49;C5MK50;C5MK51;C5MK52;C0LZ21;A0A8F4G6R9;A0A8E8GGV6;A0A858LJV5;A0A8E4NF65;A0A8E4NFQ9;A0A896SZ81;A0A2X0U1A5;A0A583ZBE5;A0A2X0SXS0;A0A2X0SR66;A0A2X0SR76;A0A2X0SR84;A0A2X0SR93;A0A2X0SRN2;A0A2X0U1J6;A0A2X0SY22;A0A2X0SY28;A0A896SZ84;A0A2X0SY45;A0A2X0TUP8;A0A2X0TUU6;A0A2X0TV13;A0A2X0SXV7;A0A2K4N8H4;A0A2X0U1N1;I0LEY6;A0A2Z5HU70;A0A6B7HG75;A0A8E4NFV3;A0A897ZMV1;A0A8D6AS17;A0A8E4J4B7;A0A8E4NGL9;A0A8E4NGK5;A0A2X0U3N2;A0A8E4J7P5;A0A896SZD6;A0A8E4J459;A0A8E4J448;A0A8E4J675;A0A8E4J607;A0A8E4J603;A0A8E4J485;A0A896SZD1;A0A8E4J3Z4;A0A897PSY3;A0A8E4NF56;A0A8D9C3M0;A0A8D9C3J4;A0A8D9BWV2;C5MK55;C5MK56;C5MR74;A0A7S5L7Q5;A0A7R8NCX8;A0A7T8GED7;A0A7T4WRW4;A0A7T5V8A2;A0A7T5V8X1;A0A7T5V914;A0A7T6AMI0;A0A7S5GRV9;A0A7S5GRU3;A0A7S5GRN0;A0A7S5GT04;A0A3S6RG08;A0A7M4BG54;A0A7M4BGU1;A0A7M4BIE1;A0A7M4BIE7;A0A7T4WRW2;A0A7T4WRV0;A0A7T3V876;A0A7S5GSH9;A0A7R8NCZ1;A0A7R8ND10;A0A7R8NDB0;A0A7R8NDG9;A0A858B933;A0A858B923;A0A858B913;A0A858LFM7;A0A7T8KXE0;A0A858LGX8;A0A7R8V964;A0A7S5GRM1;A0A7S5GRL9;A0A7S5GRK0;A0A7S5GRJ9;A0A7S5GRG6;A0A7R8Z680;C6K6H7;A0A7S5GRR7;A0A7R8V8J0;A0A7R8V878;A0A7R8RKB7;A0A7R8NE98;A0A7S5GSK3;A0A7S5GT23;C6K6H4;A0A8G1GJM8;A7L6C1;A5CLI0;A5A340;A4FRG1;B1PWE6;A2VBB7;A0A858LHD8;C0KXH2;A0A8G1GJN8;A0A8G1GF07;A0A7S5L7G5;A0A8F7CEG5;A0A8F4WI08;A0A8F4WDF0;A2IAT8;A0A8G1GJQ4;A0A858LHF1;C0KZ90;C6K6H6;C6K6H5;A7L6C2;A7UM83;A0A858LHD1;A4FRG0;A0A7S5L7M7;A0A7M4CGR9;A0A7S5L7Q2;A0A7S6PT08;A0A7S9CES3;A0A7S9FTT6;A0A7T3RIT9;A0A7T3RIW4;A0A7T3V7M7;A0A7R8Z3P3;A0A858LHC4;B8YPU7;A8K861;B8YPU8;B6DUD5;B5MAH4;B3GPN0;B1PZN8;B1PZN7;A0A2Z5HU66;A0A678ZH66;A0A2S1ZAK6;A0A2U3RU80;A0A3Q8VP37;A0A2I8B3D9;A0A5H2UF49;A0A2U3RU64;A0A2U3RU54;A0A2U3RU56;A0A2U3RU59;A0A2U3RU60;A0A2U3RU62;A0A5H2UIC4;A0A3G6VF62;A0A2U3RUB4;A0A5H2UI97;A0A5H2UI90;A0A2U3RU66;A0A2U3RU67;A0A2U3RU77;A0A5H2UIF1;A0A2U3RU45;A0A2U3RU79;A0A3Q8SLM5;A0A3G5EDE2;A0A2Z5HT37;A0A3G2LWW4;A0A375B7I0;A0A3Q9JRD4;A0A375B7H1;A0A375B7F9;A0A346XQX4;A0A346XQV8;A0A5C2FTG1;A0A346HG04;A0A3S6RFG7;A0A386RVB5;A0A3G4YSC4;A0A387LC14;A0A3B1EVQ0;A0A3G2FPC8;A0A3G2FPS8;A0A3G2FPW9;A0A5B8KIJ8;A0A386NI10;A0A3G2YUZ4;A0A3G4R8Q9;A0A2U3RU83;A0A2U3RU89;A0A2U3RU93;A0A2S0SYY5;A0A5H2UIW4;A0A2U3RU35;A0A5H2UIX5;A0A5H2UIZ8;A0A5H2UJ23;A0A5H2UTN7;A0A5H2UIN7;A0A5H2UTV5;A0A2U3RU38;A0A2S0SYR1;A0A2U3RU96;A0A2S0SYR9;A0A2S0SYS1;A0A2S0SYT4;A0A2S0SYT9;A0A2S0SYU0;A0A2S0RR69;A0A2S0RR70;A0A2S1JLB7;A0A2S1NCF7;A0A2U3RU42;A0A5H2UTR9;A0A5H2UIL0;A0A2R4SAB3;A0A2U3RU99;A0A2U3RU85;A0A2U3RUA6;A0A5H2UTZ7;A0A2U3RUB3;A0A2U3RUB9;A0A2U3RUC1;A0A2U3RUC3;A0A2U3RUC6;A0A2U3RUA9;A0A5H2UI64;A0A3G2I6K2;A0A2I8B375;A0A2S0SYU7;A0A5H2UIR8;A0A5H2UIF9;A0A5H2UIV7;A0A2R7Z5J3;A0A2R4SDD6;A0A2U3RU88;A0A346HG07;A0A5C1YU02;A0A2K4N8E3;A0A2I8B3F3;A0A2U3T1M5;A0A2X0SEZ4;A0A5H2UF40;A0A2K4N846;A0A2U3T1M4;A0A2X0SR54;A0A2X0SE48;A0A2K4N8I1;A0A2X0SEL3;A0A2X0SES4;A0A2X0SE50;A0A2X0SEA0;A0A2X0SED2;A0A2X0SEH8;A0A2X0SEI8;A0A2X0SEM2;A0A2X0SEW3;A0A2X0SE40;A0A2X0SEP5;A0A2I8B3E2;A0A2U3T1N4;A0A2U9AEI6;A0A2U9AEJ0;A0A345F0V4;A0A2Z6DSE4;A0A2Z6DS95;A0A2Z5HU63;A0A2X0U3U8;A0A6B7HG62;A0A2Z2H1J3;A0A2X0U1N9;A0A2Z2GXK8;A0A2X0U3W0;A0A2X0U3V7;A0A3S6RFK8;A0A2X0U3J9;A0A2X0SR23;A0A2U3T1N6;A0A5H2UF33;A0A2K4N8H1;A0A2U3T1N1;A0A2U9AEP5;A0A2X0SER5;A0A2X0SET1;A0A5B9RAZ3;A0A3S6RFL4;A0A5A4LTX7;A0A3S6RFK7;A0A3S6RFL3;A0A2I8B3D1;A0A5A4LMG7;A0A3S6RFM0;A0A3S6RFM7;A0A3S6RFM8;A0A3S6RFN0;A0A346GBC4;A0A2X0SEU7;A0A3S6RFL7;A0A5A4LU26;A0A3S6RFG9;A0A2I8B3B6;A0A385FB93;A0A5B8HZP6;A0A385EJB8;A0A386NE45;A0A385H958;A0A5A4LTY0;A0A5A4LU16;A0A3S6RFK9;A0A3S6RFK4;A0A2K4N7W7;A0A2X0SEX5;A0A345F0V5;A0A3S6RFK2;A0A3S6RFH5;A0A5A4M3F9;A0A5A4M3E5;A0A5A4M3C1;A0A5A4M3B3;A0A5A4M3A3;A0A5A4LU34;A0A346DAQ7;A0A3S6RFI1;A0A3S6RFI3;A0A3S6RFI6;A0A3S6RFI9;A0A3S6RFJ3;A0A3S6RFJ5;A0A3S6RFJ8;A0A1Z2RTN8;Q29843;A0A4P8D7G0;A0A6S7YBA5;A0A5H2UFE8;A0A6C0TFP0;A0A6C0THF1;A0A6C1HWB0;A0A678ZMJ6;A0A6B9VTY9;A0A7R9KCS8;A0A6C0SHE8;A0A5H2UF31;A0A6C1I614;A0A6C0SGU2;A0A6C0SDP3;A0A5H2UHV1;A0A5H2UF61;A0A6C0TDF5;A0A5A4LJD3;A0A5H2UTC5;A0A5H2UTA9;A0A6C2E0Z3;A0A6C1I9N9;A0A6C1HXC8;A0A6C1HWD3;A0A678ZGM7;A0A6C1HWC9;A0A6B9VS25;A0A6B9VT30;A0A6B9VT36;A0A7L4X7A9;A0A7L4X8T3;A0A7L4X7F7;A0A7L4X7M1;A0A7R9KCL8;A0A7L7TNI8;A0A7L7TQR4;A0A7L7TR74;A0A7L7TUJ9;A0A5H2UHY2;A0A7R9KAB5;A0A6S7YP30;A0A7R9KCN6;A0A7R9KC00;A0A7R9KBY1;A0A7R9KC13;A0A7R9KB74;A0A7R9KB65;A0A7R9KB47;A0A7R9KB30;A0A7G7XYL1;A0A7R9KB04;A0A5H2UF09;A0A6C2E3M9;A0A6B9VRL5;A0A5H2UID6;A0A6C0TGS8;A0A7U3K2J2;A0A6B9WE25;A0A6C0SGC6;A0A6B9WGP5;A0A6B9WGQ2;A0A678ZL50;A0A6C0MBN4;A0A5H2UIE4;A0A6C0SGS8;A0A5A4LK40;A0A6C0SDM3;A0A6C0SDM4;A0A6C2E122;A0A5H2UI63;A0A6C0SE92;A0A5H2UI14;A0A6C0SGF8;A0A7R9KAB3;A0A5H2USY9;A0A7M4BHB4;A0A6B9WFG8;A0A286LD92;S6AP35;A0A6V6XYE0;A0A678ZX21;A0A238TP62;A0A3S6RFG5;A0A0G2JPD3;B3KW54;Q2HPN1;A0A140T9X5;A0A6S7XUK1;A0A140T913;A0A140T8Y4;A0A6B7HGA2;A0A7R9KAW1;A0A7R9KAS3;A0A7R9KAN3;A0A2I6J4B6;A0A2K4N8G0;A0A4P2ST85;A0A4P2ST93;A0A4P2SRA6;A0A0S4XR15;A0A4P2SS87;A0A346HFZ8;A0A0S4XR13;A0A4P2SSC0;A0A4P2SSF7;A0A2K4Y3L4;A0A0S4XR00;A0A346HFZ3;A0A4P2SSB9;A0A4P2ST08;A0A2P9FIS2;A0A0U2M4K4;A0A455JVD8;A0A455JU27;A0A0S4XRJ4;A0A4P2ST19;A0A4P2ST79;A0A4P2SS23;A0A4P2SR84;A0A4P2SR98;A0A0S4XR47;A0A4P2STA0;A0A2I6J489;A0A2I6J4A5;A0A2I6J4A7;A0A2I6J4B5;A0A0S4XQZ1;A0A2I6J4C1;A0A4P2SS62;A0A2I6J4C3;A0A2I6J4C7;A0A2I6J4D3;A0A2I6J4E1;A0A4P2SRQ3;A0A2I6J4E2;A0A0S4XRX2;A0A2I6J4D2;A0A0S4XR22;A0A0S4XRU8;A0A0S4XR27;A0A0S4XR32;A0A0S4XR34;A0A4P2SRZ1;A0A4P2SS81;A0A0S4XRK4;A0A3G8GE18;A0A346HFZ9;A0A0S4XRE1;A0A0S4XRH3;A0A2U3QLI8;A0A2U3QLJ8;A0A0S4XRG5;A0A0S4XRL9;A0A2U8RNM3;A0A346A6A5;A0A3S6REZ0;A0A2U3QLI7;A0A0S4XRJ0;A0A0S4XRF8;A0A2U3QLL5;A0A2Z6DS77;A0A0S4XRH4;A0A2Z4BYD7;A0A2Z2GXL0;A0A2U9AEP6;A0A2U3QLG3;A0A0S4XRI0;A0A2U3QLG5;A0A0S4XRG1;A0A2Z4BY63;A0A2U3QLM8;A0A2U3QLJ1;A0A346HG00;A0A3G6II41;A0A375B7P5;A0A385DNY9;A0A385H959;A0A346HFZ6;A0A346HFZ4;A0A0S4XRD5;A0A3G2LWP4;A0A3G4R8Q6;A0A3G5BD36;A0A3G5BD37;A0A2U3QLG2;A0A2U3QLJ3;A0A2U3QLF5;A0A3G6V5V8;A0A2I6J4E5;A0A2U3QLF8;A0A3S6REY6;A0A0S4XRJ3;A0A330NHT5;A0A2U3QLJ6;A0A2S1B6W6;A0A3Q8U714;A0A2I6J488;A0A4P2STM0;A0A2P9FIU0;A0A2K4N817;A0A5A4LIR0;A0A7U3K2G9;A0A090KFS3;A0A0F6TL23;A0A060CZ20;A0A060VHE9;A0A0D6K976;A0A060CYB7;A0A0H3W548;A0A6B9VSG6;A0A3S6RF55;A0A6B9KAJ9;A0A455JVV0;A0A2P9FIE9;A0A2P9FIF5;A0A4D6NZ34;A0A4D6NYZ2;A0A2P9FIF7;A0A2P9FIF8;A0A2P9FIG6;A0A4P2SR04;A0A1W1RN11;A0A4P2SQM7;A0A090KEX7;A0A7U3K2H8;E3Q1L4;A0A8A0T5S1;A0A858LH86;A0A858LHN4;A0A8E4J3T7;A0A8E4J3S0;A0A8E4J3J5;A0A8E4J3I4;B7VU66;A0A858LH79;A0A897ZLK4;A0A896SZ85;A0A896SZ62;A0A890UMV2;A0A890C9Q9;A0A872YP61;A0A8A6C9V2;A0A858LNQ7;A0A858LJS6;A0A858LHP5;A0A5A4LIC5;A0A6B7FUS3;A0A5A4LIT7;A0A2P9FIE8;A0A2P9FID8;A0A2P0W8U1;A0A4D6NWB3;A0A2P9FII0;A0A455JWW7;A0A455JWY1;A0A455JWY2;A0A2P9FIL8;A0A0S4XRV1;A0A2P9FIK5;A0A4P2SR64;A0A493QP47;A0A493QP49;A0A4D6NWI6;A0A2P9FIL6;A0A0S4XR59;A0A455JWX6;A0A493QP46;A0A2K9UYT3;A0A4P2STB9;A0A2K4N859;A0A2K4N833;A0A0S4XQZ8;A0A0S4XRU9;A0A4P2SR11;A0A455JVV7;A0A0S4XR60;A0A2P0W8C0;A0A4P2SQS1;A0A4P2SQZ5;A0A2P0W8C1;A0A4P2SQY8;A0A4P2SQY0;A0A2P9FIG3;A0A2P0W8C7;A0A2P0W8E3;A0A4P2SQX9;A0A2P0W8E8;A0A4P2SQW0;A0A2P9FIH4;A0A482CYH7;A0A2P0W8D2;A0A2P9FIH8;A0A2P9FII2;A0A455JVP7;A0A2P9FIQ0;A0A2P9FIP2;A0A2P9FIN9;A0A455JVQ1;A0A2P9FIN4;A0A2P9FIM2;A0A3S6RFJ1;A0A3S6RHN6;A0A7R9KAL2;A0A0S4XQR3;A0A1W1B6Q0;A0A1W1B6K1;A0A1W1B6F7;A0A0S4XQS9;A0A191XZB8;A0A191XZC7;A0A1B1LKE3;A0A1C3PH81;A0A1C3PHA4;A0A0S4XQT7;A0A1C3PHB8;A0A1C3PHD2;A0A1C3PHF3;A0A0S4XQV1;A0A4P8NGW8;A0A1D3KYP9;A0A1D8MAM8;A0A1D8MAN2;A0A1G4HPV4;A0A1G4HPW8;A0A1G4HQ05;A0A1C3PHQ1;A0A0U5PUR8;A0A1W1RMX8;A0A1W1RMZ0;A0A1W1B5W5;A0A1S7SKF3;A0A1W1B5S1;A0A1S6Q4B8;A0A1W1B5R0;A0A1W1B5Q4;A0A1W1B5K0;A0A159AYQ3;A0A1W1B5J3;A0A1W1B5B7;A0A1V1IFP3;A0A1T4J2C1;A0A1S7SKC8;A0A1S5UYW8;A0A1W1B5Y6;A0A5A4LIB2;A0A1W1B640;A0A5A4LIA6;A0A142J256;A0A142J252;A0A142J247;A0A140T9I0;A0A1S5UX46;A0A1W1B5L8;A0A2U3QLJ5;A0A0U5PUN7;A0A2H4ZAS5;A0A291NGJ9;A0A286LDA1;A0A2H4ZAU0;A0A286LDA8;A0A2H4WPY6;A0A2H4WPX7;A0A223PYC5;A0A2H4UK28;A0A0U5PU33;A0A2H4UK27;A0A2H4WQ10;A0A286LDA0;A0A2H4WQ12;A0A2H4WQ02;A0A286RNI0;A0A286LDD2;A0A286LDC3;A0A2H4WPW3;A0A2H4WQ03;A0A286LD94;A0A286MC52;A0A286MC51;A0A346FLH5;A0A2H4ZAR8;A0A0U5PU47;A0A2H4ZAS6;A0A286LDB4;A0A0S4XQY9;A0A286LDC1;A0A2H4ZAT0;A0A2H4ZAT3;A0A140HM97;A0A286LDB8;A0A286LDC0;A0A286LDB9;A0A0S4XQQ0;A0A286LDB6;A0A286LDB3;A0A0U5KK83;A0A2H4ZAT9;A0A4P2STQ1;A0A286LDB2;A0A286LDA9;A0A2H4WPY8;A0A2H4WPY9;A0A2H4WPZ0;A0A2H4WPZ9;A0A4P2STM8;A0A286LDC2;A0A1W1B5X9;A0A1D3KYM8;A0A3S6RI42;A0A0Y0D599;A0A3S6RF49;A0A3S6RF51;A0A3S6RFG8;A0A3S6RF12;A0A3S6RF58;A0A3S6RF64;A0A3S6RF66;A0A3S6RFF2;A0A3S6RFE6;A0A3S6RFD9;A0A2S1B6V4;A0A3S6RFC8;A0A3S6RFC3;A0A3S6RFC1;A0A0U5Q304;A0A3S6RFB8;A0A0S4XRU2;A0A3S6RFB0;A0A3S6RF92;A0A3S6RF90;A0A3S6RF68;A0A2S0SYY2;A0A455JU33;A0A3S6RF45;A0A0S4XRM1;A0A3S6RF32;A0A0S4XRB8;A0A3S6RI73;A0A3S6RI93;A0A3S6RIA4;A0A2P9FIU2;A0A0S4XRC2;A0A2S0SYT6;A0A1W1RN09;A0A2S0SYR3;A0A410R970;A0A2P9FIU9;A0A3S6RIC3;A0A3S6RFH3;A0A3S8TKM8;A0A3S6RFJ7;A0A411D3E2;A0A455JU01;A0A2P9FIT0;A0A455JU13;A0A410P821;A0A3S6RFI7;A0A2P9FIU1;A0A411G9X3;A0A2H4ZAV3;A0A583ZB56;A0A0U5Q1N6;A0A4Y5ULX4;A0A0U5Q1J2;A0A4P9D212;A0A583ZB85;A0A4Y5RU99;A0A2H4ZAV0;A0A4Y7LIR2;A0A4V0NP58;A0A4V0NP60;A0A513WWM0;A0A4V0NPD9;A0A4Y6GRV6;A0A0U5Q0C2;A0A0X9WDS9;A0A4V0NP54;A0A4Y7LIR8;A0A4Y7LKT8;A0A0U5Q1N1;A0A4Y7LL79;A0A1Z2RTK1;A0A4Y7LMW4;A0A4Y7LIQ9;A0A5A4LHH8;A0A4P8VMX1;A0A1Z2RTJ5;A0A583ZB23;A0A2H4ZAV4;A0A583ZB22;A0A583ZB15;A0A0S4XQU0;A0A0S4XRU7;A0A583ZAW5;A0A0U5Q1R3;A0A1Z1VXF1;A0A1Z1VXF8;A0A583ZAW0;A0A4V0NP53;A0A583ZAW2;A0A1Z2RTJ0;A0A0U5QLK5;A0A5A4LGU7;A0A1Y6MTK5;A0A5A4LHC3;A0A0U5QLN1;A0A0U5QLP3;A0A5A4LHE4;A0A0U5QLQ5;A0A4P9D486;A0A4V0NP48;A0A858LGS5;A0A858LNS7;A0A858B940;A0A678ZVR3;A0A5H2UV55;A0A5H2UUZ3;A0A6B9MSD5;A0A6B9MYM4;A0A6B7HGP1;A0A6B9VR87;A0A5H2UV60;A0A5H2UUS6;A0A5H2UUI5;A0A5H2UU71;A0A6B9VRD8;A0A6B7IFP5;A0A6B7IFJ8;A0A6B7HGM1;A0A6B7HGL5;A0A6B7HGF0;A0A6B7FWC9;A0A6B7FWH5;A0A6B7FWQ8;A0A6B7FWR8;A0A6B7IFX5;A0A6B7HFQ5;A0A6B7HGF8;A0A6B9MQ69;A0A6B9MYM6;A0A5H2V191;A0A6B9HT24;A0A678ZGE8;A0A678ZGP6;A0A6B7FVM7;A0A5H2UU48;A0A6B9MMC8;A0A6B7IG45;A0A649XVV9;A0A6B9MM61;A0A5H2UYR5;A0A6B9KNQ2;A0A5H2UYP9;Q9GJ44;A0A6B9HR62;A0A6B9HSK5;A0A6B9HS71;A0A6B9HQQ6;A0A5H2UYT1;A0A6B7KXF2;A0A6B7KV28;A0A6B9HSE7;A0A6B9MM79;A0A6B7FVK2;A0A6B7HGN5;A0A6B7HGG1;A0A6B7HGH3;A0A7R9KCZ6;A0A583ZBC1;W1I6E7;U6A3P1;A0A583ZBB2;V6A6U0;S6FW97;S6AU97;Q9TQB6;Q9TQ73;Q9TQ65;A0A678ZWD5;X5M4Z2;A0A678ZLB0;G9FXD6;X5M4Y6;A0A0N7F200;A0A6B7HGI3;A0A6B7IER3;A0A6B7HGI4;A0A6B7HG37;A0A6B9MT85;A0A6B7HHS8;A0A6B7HHU1;A0A5H2UTD1;A0A6B7IEV1;A0A5H2UYY4;A0A6B7IET9;A0A5H2UZ01;A0A6B7IEQ2;A0A5H2UYU9;A0A6B7IEN9;A0A5H2UZ10;A0A6B7ICS9;A0A5H2V0W0;A0A5H2V146;A0A6B7IC09;A0A678ZWH2;A0A6B7ICY6;A0A5H2UU57;Q9MY52;A0A7R9KCT7;A0A678ZVS0;A0A858B709;A0A678ZGD9;A0A6V6XZ44;A0A7R9KCR9;A0A5H2UTH7;A0A678ZZB7;A0A7D5A999;A0A7D5JR52;A0A7D5VT54;A0A6S7XTJ0;A0A7L7TXB5;A0A6B7IBY9;A0A678ZM51;A0A7R9KAJ3;A0A678ZZB3;A0A5J6E368;A0A678ZIB1;A0A678ZI85;A0A678ZLD7;A0A678ZII8;A0A678ZLI0;A0A678ZH11;A0A7L4X6Y9;A0A678ZIF2;A0A678ZWV6;A0A5A4LK66;A0A5A4M342;A0A6S7XV52;A0A7R9KB44;A0A7R9KAJ5;A0A7R9KAJ9;A0A6C2E5D2;A0A7L4X6X5;A0A6M8PX82;A0A6M8PU90;A0A6M8PTY5;A0A6M8PRU7;A0A6M8DNE3;A0A6M6CEL9;A0A6M4RV88;A0A6S7XU32;A0A6M4A9L9;A0A6M3YYA1;A0A6M3YCA4;A0A6G7S6K8;A0A5H2UF04;A0A7D6ILG0;A0A6M4A9V8;A0A6M8PX95;A0A5H2UEQ8;A0A5H2UEN5;A0A678ZLK8;A0A678ZWS8;A0A678ZI69;A0A678ZGG8;A0A678ZGU7;A0A678ZGU9;A0A5Q2WTW9;A0A678ZGW7;A0A678ZGF8;A0A678ZGI5;A0A678ZVK8;A0A678ZLW3;A0A678ZM30;A0A678ZGY9;A0A6B7FT37;A0A678ZGY5;A0A678ZVQ8;A0A649WAY7;A0A6B7FVL2;A0A678ZWQ9;A0A649ZUS9;A0A678ZWN3;A0A678ZWJ0;A0A678ZVN7;A0A5H2UYQ6;A0A678ZLV0;A0A678ZLX8;A0A678ZWR6;A0A5J6WG98;A0A6B7FT82;A0A678ZIP2;A0A678ZZ45;A0A6B7FUX3;A0A6B7FUQ0;A0A7S5L7P0;A0A6B7FUY5;A0A6B7FTC9;A0A678ZGM9;A0A678ZZC7;A0A678ZZE4;A0A678ZVL5;A0A5H2UYG2;A0A6B7FT88;A0A6B7FTE4;A0A678ZKW9;A0A6B7FTG4;A0A6B7FTS4;A0A6B7FUP9;A0A678ZGL8;A0A678ZVK6;A0A678ZMM0;A0A678ZGQ5;A0A7R9KD51;A0A7R9KD16;A0A7R9PTK5;A0A7U3K2D1;A0A7S5GRP8;A0A7R9PSN9;A0A7U3L8Q4;A0A7T8EHY3;A0A7S5L7H4;A0A7T4WS02;A0A7T4WRR9;A0A7T3RIT2;A0A7T0YLJ8;A0A7S6ZR56;A0A7S5L7U4;A0A7U3L8Q5;A0A7T7GVT5;A0A7S5L7D3;A0A7S5GSK5;A0A7S5GRU5;A0A7S5GRS1;A0A7S5GRR5;A0A7U3L8Q1;A0A7R9KD61;A0A7T8G1R2;A0A7S5GRS0;A0A7U3L7P5;A0A7U3K2D4;A0A7U3L8Q0;A0A7U3K2L2;A0A7U3K2N5;A0A7U3K2N6;A0A7U3K2D7;A0A7U3L7L3;A0A7U3L7M0;A0A7U3L7N2;A0A7U3L7N5;A0A7U3L8E3;A0A7R9PSP4;A0A7U3L8E6;A0A7U3L7L7;A0A7R9PTA4;A0A7R9PSZ7;A0A7R9PSX6;A0A7R9PSX2;A0A7R9PSW1;A0A7R9PSU2;A0A7R9PSQ9;A0A7R9PSP9;A0A7S5L7S5;A0A7R9PSN7;C5IWX5;A0A858LGR5;D7GN80;D7GN81;D7GNM8;D9J2K2;D9UB07;D7GM33;C5IWY6;A0A8E4NGH1;A0A8E4J404;A0A8E4J3W7;A0A858B9H8;D5H3V5;A0A858B9A0;A0A858B990;A0A858B974;A0A7U3VIC4;A0A7U3NNH8;A0A858B8X4;A0A858B8W9;A0A858B875;A0A858B850;A0A858B812;D7GM34;A0A8G1LTH7;A0A858B934;B1PKZ1;C5IWX6;A0A8F2T8C3;A0A8F2T9F6;A0A8F7CGG9;A0A8G1GJM1;A0A8G1LSM9;A0N0E2;C5IWY8;A5A4G3;B0UXQ0;B1PKZ2;D5H3T6;B2LT55;B5TZV4;A0A8F2PSD2;C5IWX9;C5IWY7;C5IWY9;C5IWZ0;D0V481;D5H3T1;D5H3T4;A0A7U3K2B7;A0A7U3L8H8;A0A7U3L8I2;Q52YL7;Q2MJJ5;Q7YQ33;Q7YP31;Q52QV5;Q4VYE6;Q6EXB0;Q5SPM2;Q5RJ27;Q5MAG5;Q53Z42;Q704F3;Q8HWQ9;Q3LRR7;Q2MJJ6;Q2LC95;Q3LRR6;Q1ELT0;P79603;A0A6C0TDD0;I6QSJ6;A0A5A4LJC8;I2HA75;I3ZN76;I3ZN78;I3ZN79;I3ZN80;E9BVB6;I6R4N3;I7LL24;A0A455JVP4;M1RL68;Q8HWQ8;Q8MGT5;I6YAY1;G4Y0P1;A0A3S6RF43;A0A7U3L8K0;A0A7U3K2N2;E5FQ45;D9UB09;A0A7U3K2J6;A0A7U3K2J5;A0A7U3K2J3;A0A5H2UI80;A0A7U3K2I1;A0A7U3L8M2;A0A7U3L8N1;A0A7U3K2K8;E5FQ49;A0A7U3K2D5;A0A7U3K2K5;A0A7U3K2D9;A0A7R9PTH7;A0A7U3K2E5;A0A7U3K2E7;A0A7U3K2F4;A0A7U3K2F7;A0A7U3K2F9;A0A7U3K2G1;A0A7R9KCU6;A0A678ZGX7;Q8WUX3;A0A6C0SEC8;A0A5H2UTA1;A0A6B9HS77;A0A7L7TX75;S4VAM7;W8YM39;X2J3V4;X5CHJ2;X5JBB1;W6SQV0;U5XMI1;Q546Q4;A0A7D7Q764;M4R8T1;Q45NE2;L7XEN4;M1KQ42;B2DFX0;B2DFW9;A9JIG5;A9QVM5;B0BKZ6;B0FYW2;B0LL97;B1PWD3;V5L197;W8E988;W6SNC0;W0T236;W0FF27;V9W2L5;V9VYY9;V5NE49;W8SKC0;W1IB93;U6EV21;B2NJ14;Q0VJ91;Q45NE1;A0A078BBY8;S6CRG7;Q6I6G7;Q6L625;Q6L676;Q6L6P9;Q6F3H0;Q9MW39;T1WQ06;T1WGK5;R9RI97;T1RT90;S6BEP5;Q6F3I9;S6B0Q5;Q60I39;T2MKA2;S5NIY1;S5CGR3;S0F3H7;S0F3A9;S0F0M8;R9WXA9;R9WAS6;Q6I688;Q68Y63;M4RBI3;F8LFN2;A0A078BSN2;A0A090KI70;A0A076V5S4;Q75NY8;Q75WB6;Q8MHP7;Q8MHP8;Q95IZ1;Q7YPH4;T2ET92;Q7YQ36;Q75NJ3;Q70I55;Q6L6T0;Q6L6R5;Q6L6Q3;M4THY5;T2MJ84;R4RUH0;R4NLT9;R4L6P2;R4L0K0;S5CRT6;M4RBI8;Q3HNF7;Q45XP5;A5HDH6;Q0P6N9;Q0GE97;N1NT54;N1NSY8;M4QNU4;M4QUR9;Q4W6C5;Q5R1M0;Q4W6C3;B2NIZ5;Q5EPE9;U6ERM7;U4QB70;M4NJR5;Q4LAU0;Q4ZG94;Q0PMJ8;Q19K87;Q1W4D6;Q308P3;Q546F7;M4VJS4;M4VSA0;T1WE98;Q5NTA3;N0GWB7;N0AAA5;M9TIH3;M9TGE6;M5AUI8;M9R0Q6;M5EF02;M5A7E7;M4VMS8;Q540M3;M4VMS3;M4VLP5;Q5W9R8;R9RVK4;A0A7T5V785;A0A7T5V780;A0A7T5V777;B1A4T5;A0A7S7BDM1;B1AA54;A0PCH7;J7G6V4;I7HAR2;I7H3R2;K4NP16;H9BWE6;A4HQM5;F8WS75;A3KLI7;K4ULX4;A0PCH6;A1KWR0;J7RE54;A1Z0M3;F8WSJ2;A2TDT1;A2Q118;A2Q119;F8WSC7;A2VBX9;A2VBZ9;A2VC07;A2VC08;J7H9Z9;J7RT43;A4URH0;I2GUK2;I7GY09;I6QLC3;A0A2K4UQ61;I7GSC3;I7CT52;I2G8B5;I2GUJ9;A0A140T951;B4DUK6;I2GUK0;I3TBB5;A0JCS1;I7D6N7;I6Z8E6;K7YHC3;K7X0G5;I1VXL9;K4TZQ2;I1VXM3;K4NRQ4;K0P0J0;J7SAX1;A0MNW2;A0A167RN94;B1PZ64;A0A125SU93;G4VU13;A0A8G0VH47;G4XZE8;G8FQ52;C5J3R3;H2D5G1;A0A140DD53;A0A140CTI7;A0A167RN75;A0A140CQI2;A0A120N5Z8;G9FTK1;A0A120N5Y6;A0A110BIS2;A0A1B1XVD8;A0A110BIM8;A0A110BH73;A0A0Y0UTC7;A0A0X8XVK9;A0A0U5AGC3;A0A143Y1S7;A0A143Y3Y4;G1UK07;A0A167RN61;G0ZMZ0;H9EHK6;G9G815;G9IHU5;H2AM00;H2AM05;H6SSQ1;A0A140GMH8;H6UVX7;H9BB16;H9BE43;G0M6G2;G9G814;A0FIZ3;G8GBV1;A0A8F4GAG1;A0A8F4GDV6;G8GBV0;A0A142IGX1;A0A142J2H6;A0A142J2H7;A0A142J2H8;A1EAG1;L7XDT5;L7XDE9;A7XBN3;B5U8K0;B5U8C8;B3GUH7;B2DG04;B2DG01;A7UM86;A4ZVL4;A8E0S0;A7XNK1;A7XBN0;A7UM66;A7WPJ1;A7WPJ0;A7UDB3;B2NJ15;B6EBD9;B7VFE3;B7VU68;B7XH59;B7XH60;B7XH61;A7UM87;A6BML9;L7WQ81;A8E0Y6;B2CSI1;B2CY72;B2CY73;B2D0I5;A9J7N0;B2DFX1;B2DFZ8;C0KLS9;A8YQG9;A8YQF1;A8E0Y5;A5PI54;A4ZX99;A5PI53;A7MAK1;B6EBD8;A6N842;A6N843;A7MAD9;A7MAE0;A7MAK0;B2DG00;B8XPR9;B9VRL1;B2NJ19;I7B0X0;B2DG29;A0A348HAS0;A0A1B4ZAZ0;I6QTM5;I6R1A7;I6RB65;I6S4P2;I6Y0B1;I7ARY8;L0N4J2;I7C6A9;B2NJ17;A4UQL5;A4USG3;M1JPA6;B2G3G5;I6M4H6;I4EPY0;I3VB22;I3VB20;F8WSC6;L7WM55;B2NIZ4;B2NIX9;B2NIX8;B2NIX7;C0SVZ4;C1KBJ8;C3VIU8;C5J3Q8;B3GCI4;B2Z8W4;B9VSJ9;B6VAX8;B2DG08;B2DG02;B2DG10;B2DG11;B2DG25;B2DG26;B2DG27;B2DG28;B2DFZ9;B2DG09;B2DG30;B2MW44;A0A078BRA4;A0A076VF41;A0A109RSQ3;I2GAD7;S5CK34;S0F2B2;T2DL37;Q3YFF4;B3W6N3;Q6IV49;A0A1B1LTS1;Q9GIX4;A5PHP6;A0A3S8UVL2;A5PHP5;A4GWZ2;U6EGG8;Q6R740;Q704T5;I7JHQ8;S5TDV8;Q56H30;A0MSS3;B3GV26;A0A2R4RN18;A0A0H3W5K9;A4FSH4;A0A1D3TZM0;A0A0K3AQT5;A1KWT0;W6JNQ2;D9UAY7;Q4U4M8;A0A7I8AUN1;A0A7I8AUN5;A0JKD2;A3FP42;W1IAW1;A2Q116;Q4QZ17;W6N8T7;T1SRM5;T1WF48;Q6IUZ5;M1GLN3;Q6ZUK5;F0VRV9;D1MZU0;F4NBU6;A5A163;Q6SZ68;E3Q1H9;Q5G0G2;Q0MX32;Q56H29;A0N001;G3CCE5;F4NBU7;A3F720;F4NBU1;A0A060D9N2;X4YZB9;Q861F5;B2NJ40;G3ETQ6;D6CIC6;B6E278;Q4JLV9;Q06FC4;A6Q0R2;A0A2C8D147;F2VS03;A0A4U8Z830;F0VRV7;A0A8F4G964;A7LKN0;D9I8N4;Q8MHN8;A0A7S8WJX7;A7Y1U3;A0A180K1J1;C1KAF0;A3F718;A0A1D5B139;A3F719;S5LQY8;S6BHQ7;D1MZ01;Q19BJ8;A0A076V371;R5AK10;F4YTE2;F4YTE0;B7VGE9;Q5W3L5;R4ZGR0;A0A143Y4M2;B5ARH3;R5AK04;A0A2P1CQH5;Q5ND74;D5H3T3;E3VSS8;F0VRW0;A0A140T955;F4YTE3;D5H3V7;F4YTF4;D6CIC3;F5ATB1;A0A0P1IVS1;F0VYJ3;A0A411E079;Q4F7G5;B1GYE9;A2RQE1;B1GYE8;H9BNV4;A0A1X6WJC9;F4YTE4;H6SHQ5;I2GAD8;Q95IE7;A0A140T941;A0A3G6II09;Q8SNC1;A4Q972;A4Q971;A0A1D3TZL9;C0KZ88;A0A1W2PR61;A0A140T975;Q29948;F4YTC5;D5H3U0;Q7YP32;I1VH01;D9UAY5;D9UAZ1;D9UAY4;A0A0B7MAY8;A0A583ZBR5;A1YWK4;A4URH7;A0A2R2WVJ3;U4N162;Q95350;A0A345F7A7;Q95349;A0A1B1VTC3;A2V815;A0A0U5L7I7;R4ZGQ8;D9UAZ2;Q95351;L8E9Q0;R4ZGQ9;D5H3W0;A0A2L0RIP1;F4YTC4;K0P0H0;R4ZGR4;A0A0D6K9C0;A0A140T933;A0A140T8W8;D6CIC4;F4YTG5;F4YTC7;F4YTF0;D9UAZ0;R4ZGR7;F4YTD8;A5PHT8;N1NFJ0;A0A0S2KQY6;A0A0F7QZE6;A0A142J1V6;H6SI89;T2MKA4;T2MJP9;U6EFV3;A0A6F8VGI6;A7M780;R7RTM7;A7WPI9;A0A0N9HR25;Q9TPQ0;A8ILL3;B2CZA7;B2CY74;R5AK17;Q7YQ45;Q9GJF5;A0A514YDQ3;A0A0N7G7C7;A0A0K2GUM7;A0A583ZAX1;A0A455WHI8;R4KW00;A0A0N9QWF4;Q9UE94;R4RWW2;A0A0N7FRR2;R4MU36;A0A583ZAV3;R4NA36;T1WF39;A0A6B9CQX0;A0A6C0TKG2;W6SJH9;A0A125RL89;A0A455WJG6;A0A3G9HRF1;A0A4Y1YQ41;W0G8H1;M9T3Z4;A0JKD1;A5A4L6;A0A4Y5UYA0;W0G8H6;R4L5C3;R4MS49;U6C266;A0A0S2C596;A0A0P0GBC9;V9VAM7;V9W407;R4L6H2;W0YKF2;R4NK37;R4N4G0;R9YI90;A0A1C9ZV22;Q860B7;Q9BCT5;U6ER56;A0A1G4NQV4;V5L351;A0A167RMM9;A0A1C3L6B7;A0A1C3L6C3;A0A1C9ZQS3;Q9BD03;A0A1C9ZWK6;B1B727;A0A0F7ILB5;A0A583ZB06;A0A7D9BVQ7;A0A0G3EM61;A0A5K0UCM8;A0A0A7EBW5;A0A387L8J0;A0A060GVB3;A0A061A7U0;A0A061CVW2;A0A167RMW8;A0A167RN49;R4N0R6;A0A1B1UZB7;R4U4H5;R4N0R2;A0A0K2GUM3;R4NBX1;A0A1X9PY90;V6BP59;A4UUL3;U6EV26;U6EUE7;A0A1S6GKZ1;B1Q4W3;U6ETS3;U6ETR8;Q8HWL6;A0A1M4NF67;A0A1Z1W2A7;A4URG9;B0LV24;A0A1A8H5D0;A0A192ZH27;B1Q4R7;Q8WLS2;S4VGP7;W6SL23;A6H591;U4Q5A9;Q9GJF1;A0A2H5CP65;R9RIB4;W0GCL4;A0A0H5BJS0;U3MMY2;A6H592;A6H346;R9RUW0;A0A343J4V5;A0A2D1WBC6;A0A343J4V9;A0A3G1VFM0;B1B6Q5;A0A3G8GE06;A0A3G8GE28;R7RVA4;Q9GJF6;A0A0H3W567;U3N7V6;U3PX30;Q8SNC8;D7RTU8;A0A2Z4HTY3;S0F0X7;S0F2I7;A0A0G3VSP7;Q29937;P79556;A0A583ZBA2;L8BTZ4;T1WEN4;A6N9E1;S6AQL6;R9USF5;A0A0G3ENZ2;U3MYE2;A7MAP2;Q0GF39;G8FT56;S6C5A5;U5XVD3;R9UQX1;U4PSC0;W8TKG1;X5EPI2;W0GBI5;W8NT44;X2J867;W8XWP2;A0A2Z5ZNJ5;A0A2H4V664;W0GCL9;W0GCP1;W0GCP4;A0A7T6ANY8;Q8WLS3;A0A7T6AP32;W8SMD3;A0A2I6ZCW1;W8SW77;A0A7S8WJT4;A0A6G6D3S7;W8XWJ3;W8GIU3;A0A0N9MX94;A0A0N9MXA6;A0A0N9Q8N5;A0A583ZB91;Q8SNC9;R9RFL0;A0A286R104;Q95IB3;Q95IY4;W0G8J4;A0A286R647;A0A343J4W0;A0A3G9HKA4;A0A3G9H9M4;A0A3G8GE33;A0A223PK90;A0A2R3U9W8;A0A2R4KZT8;A0A2Z4LG68;X2JR57;W8T046;A0PBY4;A0A6G6D3T3;W0HHM6;X2JJP1;A4URF1;A2VBZ8;Q8MHP6;B1B6Q4;W5VXV3;A0A1B4XT82;A0FIZ4;B6ED01;D1MZT9;D3YLL2;Q1PAF7;Q1MW39;Q1XDZ2;D5GU49;Q3LSM8;Q3LU32;D2KZ54;D2KZ56;Q29642;D1MZT6;Q15JB2;Q4F7G8;Q3LSM9;Q4F7G6;Q45XP6;Q0GGL8;Q45WA4;C5J4N4;Q3ZUS8;C6H0N7;Q4A1W0;Q1T719;Q1T720;B6ECH4;Q4W6B9;D2KZ35;D2KZ34;D2KZ33;Q6F3H8;D2KZ32;D2KZ30;D2KZ29;D2KZ28;Q4VZZ4;Q4W5U1;D2KZ31;Q1XG70;Q6F3H7;Q6F3G9;B3V990;Q70FD0;Q1XG71;Q1EPW1;D2U6Y7;D2KZ27;D3YFD3;Q401C8;B5A516;Q5NT48;U6ERN2;C8ZLL2;D1H0T6;F5BX13;F5BWX2;F5BFH3;E3Q1V2;D1H0Y9;F8LFN4;F4NCC0;D1MH25;F8LFN7;F5B9I3;D0AB32;F5B9H7;G9IBU5;F5B4I5;F4NC95;F2XI40;F2XI42;F2XI43;F2XI44;F2XI45;F2XI39;D0V0N1;I0DFJ4;D1J6X4;C6H0P2;Q2HPY2;Q2L4W2;Q2L4W9;Q2WCC1;F8LFN3;D1H0T8;C8ZLL1;C6L835;Q306H4;Q306J9;F8LFN6;C9EI95;F5BH03;F5BH04;F5BSL9;G9IIU9;G9IBU4;F8LFN1;F8LFM9;F6IQ92;F6IQ78;C6H0P0;A0A6B9VTQ9;Q9GJ38;I6QND5;J7QJV5;J7I188;J7HKQ5;J7HI06;J7HH07;C6H0N9;B2DFV9;Q75NT9;Q0ZAX5;Q0E9R1;I2G867;J7QDG3;J7JQD7;I7HHI0;I7ID09;I7L1P5;I7LP08;E0WMV7;J7G1Z4;I7HFK0;I7H7K5;J7QID7;J7RT51;J7I9M0;J9UMP6;B7XGC2;M5EE36;I4IY67;E0WN85;I4ENX4;E0WN83;E1Y7D1;I3TBB4;E2GD50;E2GHW7;I2GUK4;I6YAZ9;F2XI41;J9S2M4;F4NBP1;J7RE59;J7RMN3;J7RT46;J7S4C1;Q6AW24;J7S4C5;J7SAX4;J7SBL1;J9R4R9;Q75NT8;B6ECH5;Q6IVJ2;D2KZ36;Q7YNX5;B2DFV8;Q4ZG95;Q5JZI4;D5H3I6;Q1MW38;Q6F3H9;Q6F3I0;Q6F3I1;Q6IV50;Q6J4L1;Q6F3D5;Q4W6C4;Q6J4L2;B3GUH8;Q6Q0M4;B2G3P7;Q6F3G8;Q6F3G5;Q6F3G4;Q6F3E1;Q6F3E0;Q6F3D9;Q53TZ9;B3WFC9;Q5PS30;Q5S752;Q5S268;Q6F3D6;Q5R1M4;Q5NTB1;B6VA00;Q5NTB0;Q5MD87;Q5KQR9;Q5K1Z3;D3YLL1;Q6F3D4;Q75NU2;Q75NU4;Q5XNP8;Q5XL22;B3WFC8;Q53TZ8;B7XH57;B9VJL8;Q75NU3;B9W1S7;Q3LAZ3;F5B4I4;G9HZ40;E9RKA8;E1Y7D4;E1Y7D3;E9BVF4;D2KZ26;E9RK89;E9RK90;E3Q0X2;E9RKA5;E9RKA6;E9RKA7;E9RKA9;E9ABX5;E3Q1J0;F0VRW1;F1CGT1;C6L833;E9ABI3;F2XI36;E2D8Y1;E3Q0X1;E3Q0X3;D1MYZ3;E1Y7G1;E9ABX6;F4ZZU3;D6CJD1;D2KZ25;E9RK88;D2KZ24;D2KZ23;D2KZ22;D2KLA4;D1MZU2;D1MZU1;D6CJD2;E9ABX7;D6Q0R3;E1Y7D2;E7CYP3;E9RJS4;E9M386;E9M1F0;E9LWA6;E9BVW0;D6CIN1;E9BVF5;E3UM70;E9RK93;F8LFN5;C9YSQ4;H7CHW6;C6KEB2;H7CHW5;H7CI02;H7CI03;H7CI04;H9B8Z1;F6IB50;H7CI01;Q256S0;H7CHX1;C6L832;H9BIZ7;H9BAN3;H7CHW9;Q9MY68;Q5QR53;H7CHW8;I0J9E2;E9ABX4;D1MZ09;H7CHW7;C6H0P6;E3Q1J2;E7BBA5;E3WH36;E3WH37;E3WH38;E3WH39;D1MYX6;D1MYX7;F5BZ30;F5ATC5;E5FYN0;E7BBA2;E7BLC9;E3Q1J1;D1MYX8;Q5NT47;Q8HWG0;H7CI00;H7CHZ9;H7CHX0;H7CHW4;C6L831;C6H0P5;D2U545;D2U6Y8;D4II60;A0A140T9A9;G9G830;E3WH35;H2EL73;C7DRS0;A0A140T9G0;H6SFV4;H6SSQ3;A0A140T9H3;H6UWY6;H6V7K0;E3WH34;H2AM02;H3K398;C7C3M7;E5BBI6;F8WS76;K0P2R8;D1MZT8;C6H0P1;G5CBS6;E9ABI2;H2AM46;A0A140T9S9;D4II61;F8LFN8;D1MYZ9;F2XI29;F2X5P6;F4YTF3;F4ZZU5;G9I1P4;F4ZZU7;U6EFP0;F4YAL4;F5B2N8;F2XI38;H2AM01;F8LFN9;C7EX07;F5A500;A0A2R8BPU9;F1CK29;E0WMN3;U6EFS2;E0WMM5;G9FXM6;H3K396;G4V4C1;C7DUX4;G3LHV2;E1Y422;H6SSQ2;D1MYZ1;D9UAT3;E5FYM9;G9DBG5;E0WMY5;E0WN66;E0WQB2;E1XUI5;D7GM42;D9UAX7;G1UK08;E1Y6P9;D1MYZ0;E1Y6U0;E0WMY6;D9UAX6;E1Y6M4;A0A4P8DJ79;M5A7P5;A0A0H5DBU6;D5L2Y1;F2XI37;D9UC13;D9UAY0;D9UAX9;G1DHD3;E9RK91;G0Z6Y5;G0WJE9;G0M6G0;G3CCB5;F4NC93;C6L834;E7BBA3;E0WMW0;E0WMV9;G9DBG7;G9DBG8;G9DBG9;G9DBH2;G9IIV0;C8CH44;D1MYZ2;F2RM42;D9UAX8;I6M4H7;E0WN82;A0A182ATM1;A0A3Q9X1I9;A0A1C3L6G3;A0A1P8SNK2;A0A1L4FR13;A0A1C3L6C5;A0A1G4HPT5;A0A387LAN5;A0A387L9Z4;A0A387L8U0;A0A345BDY9;A0A1C3L6C8;A0A1L2D2B1;A0A3S8UVH7;A0A1G4NR61;A0A348HAQ6;A0A348HAR0;A0A348HAR7;A0A348HAR8;A0A343J4W3;A0A348HAR9;A0A1W7IP33;A0A348GSH6;A0A1G4NQY5;A0A3S8UVI9;A0A1C9ZUN1;A0A1G4NQU8;A0A3G2JRR0;A0A2R4LVM6;A0A290Y5W4;A0A286R106;A0A192ZHK6;A0A3Q9WTK6;A0A3Q9DAP4;A0A3Q8U713;A0A1E1FFW2;A0A1G4HPS4;A0A290Y5V9;A0A343J4W2;A0A1C9ZUT9;A0A1B4ZAY6;A0A2S1B6P5;A0A1Z1N309;A0A286R0Z9;A0A286R102;A0A343J4W4;A0A0N9Q873;A0A3Q9X0D3;A0A3Q9X1U1;A0A3Q9XXZ5;A0A1G4NQV0;A0A1G4NQT5;A0A2D1WB99;A0A385H557;A0A387L8C4;A0A348HAV3;Q7YPH5;A0A0H5CVR6;A0A6B9CGR4;A0A6B9F4V1;A0A2R4KZU6;A0A2D3BHS4;I6RVJ2;A0A0K2GUM4;A0A0N9MPC4;A0A0N9MQY3;A0A4Y1YSD2;A0A0U2YQU7;A0A1B4XVI6;A0A0N7FRR0;A0A0K2GUY1;A0A0N9R1F6;A0A515HFN5;A0A0K2GUM5;A0A0K2GUL8;A0A0K2GVF2;A0A0K0QVX4;A0A0N9MQZ5;A0A0N9MR62;A0A0N7FRR1;A0A0K2GUN1;A0A4Y1YSE1;A0A0S4L2T4;A0A0S2UQD6;A0A0S1RW44;A0A0S1LG07;A0A0N9MI69;A0A0N9MI60;A0A0N9MVH4;A0A455WIQ1;A0A140CTI5;A0A1B1UZL5;A0A1B1UZB8;A0A1B1UZB6;A0A1B1UZB5;A0A1B1UUG9;A0A192ZHL1;A0A1B1UTT9;A0A0U2ZJ44;A0A455W905;A0A191T7X2;A0A0N9M6L7;A0A182AU56;A0A182ATP2;A0A1B1UZM8;J7JQD3;A0A167RN89;A0A167RN79;A0A0N7G7C8;A0A0N7G7D0;A0A0N9M6K3;A0A583ZBK5;A0A0N9R1T7;A0A0N9MHY4;A0A2S1B6D2;A0A1C3L6C7;A0A2Z5ZND7;A0A1P8YVW0;A0A2Z6ICM3;A0A2Z6ICQ8;A0A2Z6ICV7;A0A2Z6ICX8;A0A2Z6ID83;A0A1S6GL05;A0A1W6LWH8;A0A1W7INY8;A0A1W7IP42;A0A2Z5ZMJ5;A0A2I6ZCW9;A0A2P1CPV9;A0A2P1CQ60;A0A2P1CQE0;A0A2P1IUQ8;A0A290Y5X1;A0A3Q9WVJ8;A0A2R4LVN5;A0A2S1B658;A0A343J4V6;A0A1P8SNK5;A0A2Z5HVJ5;B2NJ16;A0A0N9Q867;A0A0N9R1E3;A0A1S6GL35;A0A0N9QZ02;A0A0N9QV62;A0A0N9QV50;A0A0N9QNJ5;A0A0N9QHU8;A0A1S6GL10;A0A0N9QHU3;A0A0N9Q8M9;A0A0N9MVK2;A0A1P8YVW3;A0A0N9QWG7;A0A0K0PYY3;A0A1B4ZAX9;A0A1S6GL14;A0A2Z6IHX2;A0A0N9QZ10;A0A2Z6IF26;A0A0U2NV12;A0A1S6GKY9;A0A1S6GKY7;L7URE3;M5EF56;K4UNL4;L7QJG7;K7X3R1;M4QG06;E0WMV2;L7UY17;L7UY14;K7W971;M4VLN4;A6N5Y9;L7QJN0;L7QJ92;L0BWC1;L0BUI6;K8ESB1;L7QJN1;K4UF67;I7B0X5;I6YW25;N1NUU1;C6H0P4;C5J3U2;K4MQ44;E0WMV3;D1MZ00;M4VLN9;M4Y2P8;M4WJD1;K4N0X3;M9TGD7;I7GGT2;I7H7T3;D5L6G2;E0WMN2;I6YW19;K4ISM7;K0PB47;K0P791;I7GUM5;I7GQ37;I7H0B8;I7B4Y7;K4ML26;I7A3E6;I6ZW87;I6ZW80;I6Z477;I6Z474;C6H0P3;M9WLY3;K4PXS1;I6TKJ3;N0AAS5;N0A2V4;N0BQN4;M9TGE2;N1NV67;M9TME8;N1NUT7;M9TNT0;Q06BD1;D7GLM1;D7GNM3;D9IDV1;D9UAX5;E0WMM9;M9ZRM2;N1NSZ5;N0A944;N0BSI6;M9ZZ98;N0A0P4;N0A0S7;N0A0T3;N0BX80;N0A2U9;N0A4G2;N0A4G7;N0A939;A0A068PCV8;I7H1H3;Q09JY6;A0A068PF82;A0A076VJD6;A0A077HBK1;A0A077YF27;A0A078BNN6;A0A0F7DDK1;A0A6C0TJF0;A0A6C0TJR3;A0A0H3YCC4;A0A023T5V9;A0A090K2C7;A0A0A1GK28;A0A061CMV3;A0A0F7WA85;A0A0F7RND5;A0A0F7ILQ0;A0A0A0YKE9;A0A0F7GWV2;A0A0G3EHC5;A0A0C5CDV5;A0A0B5CZ67;A0A0A1GPV2;A0A0A1EDG2;A0A0H5CW80;A0A0F6TLB1;A0A068EQF7;A0A0A0YP92;A0A0C5BUF2;A0A0H3W5K7;A0A089PAU6;A0A068J6T1;A0A0H3W563;A0A0H3W5K6;A0A061CKU3;A0A060N2L5;A0A060N0U0;A0A5J6BTH8;A0A5J6CWL3;A0A0H3W570;A0A059WRJ1;A0A090KJ24;A0A090LXA5;A0A097PEB8;A0A098GY48;A0A060GU53;B2G3G4;Q4JLV8;A9QUT8;Q861D2;Q861D1;A0A1C3PHV5;A0A1C3PHW4;F4YTG2;Q861D6;Q861D5;A0A1C3PHX5;A0A0B7MH47;A0A1C3PHY3;B9VWB1;A0A1C3PHZ9;A0A0D6E1V4;A0A0B7MB31;A0A1G4HPV5;Q5QR49;A0A866W1K1;Q8HWR0;A0A1C3PHK3;A0A1C3PHU5;C0KZ89;A0A1C3PHK8;A0A0B7MGC3;A0A2I7FSU5;A0A2I7FSU8;A0A0B7MH39;D5H3W1;F4YTE9;A0A0B7MGC9;A0A0B7MGB5;A0A1C3PHN4;A0A0B7MGA6;Q861D4;Q5QR47;A0A0B7MB46;Q8HWQ3;A0A142J2H2;A0A142LRG6;A0A1K1TA07;A0A1C3PHM8;Q5QR38;A0A1C3PHK6;U5YJI3;Q7JGR9;D9UAY9;Q5QR35;Q2LC90;Q5QR48;A0A060VG17;B4DJI3;Q7JGS0;Q7JGS1;A1XAM5;D9UAY8;Q5QR51;Q5QR54;Q5QR55;Q5QR56;Q8MHM7;D9UB27;Q5QR57;A0A060VG23;Q861F7;Q5QR37;F4YTG6;Q5QR39;A0A411DVA1;F4YTG3;A0A167RQK8;J7FV22;Q5QR41;Q5QR43;J7FZQ3;A0A060IP86;A0A160YHR7;A0A1G4P1X3;Q5QR40;Q5QR44;Q5QR45;A0A1W6C2M8;Q5QR46;A0A7G7Y9G1;D6CIB8;J7FTC9;A0A4P8PQU3;A0A2I7FSU2;A0A6V6XYL5;A0A1C3PI05;W6JM27;F4YTG1;B4XKD1;A0A0B7MB43;H2DH14;F4YTF6;Q861F6;Q861C8;A0A1C9UPQ6;A0A0B7M9U4;A0A0B7MHZ0;A0A060VG64;A0A090KF41;A0A1D0BU97;A0A097ZQV5;A0A0B7M9U8;A0A1C9UPQ9;A0A1C3PI08;C9E311;A0A0B7MH26;A0A0B7MGD3;A0A0B7MGD5;A0A0B7MGE0;A0A0B7MGE7;A0A0B7MGZ1;A0A0B7MH17;A0A0B7MHZ7;A0A0B7MI02;A0A0B7MI07;A0A0B7MI08;Q95HA7;B6VAW4;Q8MGY9;Q861D0;A0A0B7MH42;Q6ZXT6;A0A128DYW3;A5LIC1;I0JGT8;A2BCQ5;A0A0B7MI12;A0A128E1E0;B7UE87;Q7YP23;Q9GJP2;A0A090KEW9;Q5QR59;Q5QR60;A7LB38;U5YJR3;F6IR56;U5YKE3;B2DG03;U5YJP1;A0A1D0C3Z1;U5YJN4;A0A1Z2RP38;A0A1Z2RP29;A0A1Z2RP33;A0A173ADA9;A0A1Z2RP15;A0A173ADD5;A0A173ADE8;A0A0S2IKZ7;A0A0S2ILF3;A0A0Y0BQH0;G0ZE05;U5YKC3;A0A125S9I1;A0A173ADB5;A0A173ADA6;A6H579;A0A191XZD2;A0A1D0C3I1;A0A1C3PHM2;A0A1C3PHM4;A0A0B7M9V3;A0A0C5K610;A0A075MGT0;A0A1A7G6U7;A0A191XZP2;A0A191XZP0;A0A191XZD0;A0A173ADA1;A0A191XZC1;A0A191XZB9;F6IR58;A0A191W087;U5YJR6;A0A173AD94;A0A1Z2RP51;A0A1Z2RP60;A0A173AD95;U5YMH5;F6IR17;F6IR21;A0A1C3PHI4;A7MAP7;F6IR53;F6IR54;U5YMK3;A0A2P1CQH6;U5YJJ1;A0A7G1KZ10;U5YJM1;F6IR51;U6BR78;U5YKE0;Q5D1W9;F4NBX9;F4NBX5;F4NBX7;E2FIL8;I4DCY7;Q70KF9;A0A1C3PHI3;A0A866W3D0;A0A1C3PHH0;B0JF24;A0A1C3PHI7;A9JPE8;A0A1C3PHI2;A0A1C3PHJ2;U5YMG9;F6IR48;F6IR47;U5YMN5;F6IR46;B5U8D0;U5YMG4;A0A142J144;U5YKI0;A0A1C3PHJ0;F6IR57;A0A1W5LVZ2;F6IR55;U5YMF4;F6IR52;U5YKH4;A0A173ADG8;A0A060VCW9;A0A088MI97;A0A060VCY9;A0A1D8MAP9;A0A0D6K9D0;A0A060VCY8;A0A1G4HPV1;Q5QR52;I4EC43;A0A1G4HPR8;A0A1C3PHL6;A0A1G4HPY9;A0A1D0BZT1;A0A060VHJ3;A0A060VHG8;A0A1D8MAS2;A0A060VHD9;A0A1D8MAQ1;A0A583ZAW4;X5MPH4;A0A060VCX0;A0A1C3PHL3;Q5QR36;Q5QR50;O19589;A0A1C3PHK5;A0A140T9Z6;X5MNS5;A0A1D0BQW3;A0A1D0BUD9;A0A1G4HPU1;A0A191TDI6;A0A060VD05;A0A1C3PHL4;A0A090MF36;X5MPH1;A0A1K0J517;A4UTT5;A0A1D3KYT4;A0A1D3KYI3;A0A173ADE1;X5MI18;A0A060VG36;A0A1D8MAM5;Q9MY26;A0A1C3PHE2;A0A3T0TUN6;A0A1D0BZU4;A0A1C3PHD5;A0A1W2PPF8;Q30207;A0A1C3PHD8;R9RU93;A0A173ADK7;A0A1C3PHL8;Q30206;A0A173AD52;Q2A133;A0A1C3PHJ7;A0A1C3PHK4;A0A1D0C3E8;F4YTF7;D5H3H6;A0A173ADH9;A0A173ADM2;O19781;A0A6C0TDC8;A5HM76;A0A1W2PPQ2;X5MNS3;X5MBH5;A0A060VCU0;A0A060VHF3;A0A060VCU4;A0A1G4HPX8;Q30191;A0A1C3PHM3;A0A1C3PHK7;A0A1W2PS39;A0A1C3PHM0;A0A583ZBC2;A0A6V6XYN7;A0A2I8B359;A0A2I6Q792;A0A141MJG6;A0A2I7FSS5;A0A291HVF0;A0A2I7FSS6;A0A2I7FSS9;A0A2I7FST0;A0A2I6Q790;A0A6V6XYP4;A0A286MCF2;A0A6V6XYQ0;A0A2I7FSY0;A0A2I7FSX2;A0A2I7FSX1;A0A2I7FSV9;A0A2I6Q7B2;A0A2I7FSV7;A0A2I7FSV4;A0A2I7FSV3;A0A2I7FST4;A0A291HVI3;A0A2I6PN81;A0A286MCG5;A0A1L5LC24;A0A286RSS2;A0A286MCG4;A0A238TPE3;A0A286MCE8;A0A2I7FST7;A0A286MCE9;A0A291NGL0;A0A286MCF1;A0A286MCF3;A0A238TMI3;A0A286MCF5;A0A286MCF6;A0A286MCF0;A0A2I6PN80;A0A2I7FST6;A0A2I7FST3;A0A291NGL5;A0A223PYI5;A0A238TM21;A0A2I7FSV2;A0A2I7FSU9;A0A2I7FSS4;A0A2I6Q7C8;A0A1W1B5Y3;A0A218N9R7;A0A218N9S5;A0A2I6Q7C0;A0A2I6Q7C1;A0A2I6Q7C3;A0A2I6Q7C4;A0A2I6Q7C7;A0A077B7N4;A0A2I6Q7D4;A0A2I8B351;A0A2I6Q7E1;A0A2I6Q7E2;A0A2I6Q7C5;X5MBG6;A0A1X9PQR1;A0A1W6C2K8;A0A2I6Q7B3;A0A2I6Q7B4;A0A2I6Q7B6;A0A2I7FSW1;A0A2I8B350;A0A2I8B349;A0A2I6Q7A5;A0A2I7FSV0;A0A2I7FSR9;A0A2I7FRK9;A0A2I6ZMX6;A0A2I6Q794;A0A140HMA1;A0A1W1B5P0;A0A1W1B5Z3;A0A2I6Q7B1;A0A2I6Q7B0;A0A2I6Q7A7;A0A2I7FSY1;A0A2I6Q7A6;A0A2I6Q7A0;A0A2I6Q799;A0A2I6Q798;A0A2I6Q797;A0A2I6Q796;A0A2I6Q795;A0A2I7FSS7;A0A2I6PN79;A0A1W1B681;A0A0I9NC61;A0A0U2X5S9;A0A0U2VW57;A0A0F7W2L2;A0A0G2R1G9;A0A291NGM1;A0A0G4PZI4;A0A0H4KBJ1;A0A0I9NAK5;A0A0U2VW74;A0A0S2IKX6;A0A0U3DQX3;A0A0S2IKY7;A0A0H3W501;A0A286MCG3;A0A291NGL6;A0A1C3PHJ5;A0A140DJC6;A0A0D6K9J7;A0A110AJQ0;A0A0U3DVR8;A0A2H4RK86;A0A140HMA0;A0A6V6XYN3;A0A142J2H0;A0A125R6G6;A0A141MJG8;A0A142BS56;A0A142DDR8;A0A286MCF4;A0A0B7M9X1;A0A2H4RK88;A0A2D1CJE8;A0A142J2H1;A0A140EDH7;A0A140HLF2;A0A142J2G8;A0A142J2B2;A0A142J2A7;A0A142J2A6;A0A142J2A5;A0A142FK43;A0A142FK33;A0A142J2G6;A0A140EDH8;A0A0U2XN52;A0A0U2YQR1;A0A2H4RK89;A0A0B7MB11;A0A2I6PN74;A0A2H4RNB2;A0A2I6PN76;A0A2I6PN98;A0A2I6Q780;A0A1G4HPX7;A0A1G4HPU3;A0A173AD82;A0A0B7M9W0;A0A223PYF2;A0A0U2ZJ13;A0A2I6PNA0;A0A223PYF0;A0A218NI16;A0A218N9S9;A0A291NGK3;A0A291NGL4;A0A2I6Q789;A0A2I6PN72;A0A223PYE1;A0A2H5CPB2;A0A2H4UK33;A0A223PYF4;A0A2H4UK14;A0A0U3BX63;A0A0U3D483;A0A0U2XA78;A0A0U3D8Q5;A0A0U2Q241;A0A1K1TAX7;A0A0U2ZUJ6;A0A286MCG2;A0A286MCG0;A0A286MCF9;A0A2I6PN88;A0A2I6PN87;A0A2I6PN85;A0A2I6PN83;A0A2H4RK95;A0A2H4RKA2;A0A2I6PN91;A0A2H4RNB1;A0A2H4RNC4;A0A1W1B672;A0A1W1B697;Q5F311;A0A1C3PHZ2;A0A090KFX9;A0A0B7MHY3;A0A0B7MHW2;A0A0B7MH52;A0A0B5JL51;A0A1C3PHN0;A0A0B5J5S1;A0A0B7M9U0;A0A0A1E850;A0A0B7MB33;Q861D3;A0A090KFR2;Q861C9;A0A060VCZ2;A0A060VD11;A0A090KME8;A0A090KM51;Q861C7;F4YTG4;Q709M5;Q70HJ6;F8T959;Q5QR58;A0A0B7MB35;A0A0B7MI00;Q29853;Q7YP17;O78126;A0A1Z2RPA9;A0A1W1B5E1;A0A1Z2R891;A0A1W1B5Q3;A0A1Z2R895;Q7YNX2;A0A1N7SXR8;A0A1Z2R894;A0A1S5UYW6;A0A1W1B5J7;A0A218MK40;A0A218MK47;A0A218MK59;A0A218MK64;A0A1Z2R896;A0A218N9R3;A0A1W2PRT9;A0A1S5UWQ2;A0A1W1B5L4;A0A218N9R8;A0A0B7MB19;A0A1W1B6A3;A0A1W1RMZ4;A0A1W1B614;A0A1W1RN18;A0A1W1RN34;A0A1W1RNN9;A0A455JVC5;A0A1W1B6C0;A0A2I6R6F9;A0A0B7MB28;A0A1S5V2W1;A0A1W1B5F9;A0A1W1B5E7;A0A1W1B5E0;A0A1V0S7Q2;A0A1V0S7K3;A0A1V0E5B6;A0A1S6GKZ7;A0A1S5V2W8;A0A1W1B5I2;A0A1X9PWD3;A0A1W1B5N8;Q08173;A0A2I6R6J5;A0A218N9S8;A0A2I6Q7C9;O19691;A0A141MJH1;A0A024F8H3;A0A125S9G7;A0A583ZBE8;A0A140DJC8;A0A140EDH6;A0A2K4N818;A0A1G4HPX1;A0A1G4HPW2;A0A090KM56;A0A0F7NG46;A0A583ZB57;A0A4Y1YR62;Q2LC92;A0A142L065;A0A140HM96;Q14QQ0;Q8HX85;Q7YNY0;Q9GJ24;Q7YNX7;A0A2S0SYT1;Q95353;A0A583ZBB1;Q29934;A0A6B7KYT1;A0A0D6K953;A0A3G1GJZ1;A0A5J6CWT4;A0A2K4N840;A0A583ZBA7;A0A3G1GK56;Q9GJ61;U5YKE8;B1GYE7;M1JNG6;F0VRV8;F6IR28;F6IR41;F4NC24;F4YTD3;E9RJS5;F4NC34;F4NC30;E9RKB1;F4NC32;F6IQV8;A0A076JT77;P01889;E3WH40;A0A7D9FW95;F4NC28;F4NC29;F4NC27;F6IQV4;F6IR34;U5YJI7;F6IQV1;F4YTE8;F6IQU9;F6IR44;F6IR43;F6IR36;F6IQX9;F6IR42;F6IQU7;F6IQV3;F6IQY9;F6IQU0;F4NC25;A0A2K8FU56;F6IR30;F6IQV2;F6IR29;F6IR27;F6IR26;F4NC33;F4NC26;F4NC31;Q0E7X4;Q5D1X0;U5YMM3;A0A0A7TVJ0;U6BQP3;F4NBY0;U6BM83;U6BQP8;A0A0K3AT85;F6IQS2;U6BQQ1;U6BR47;A0A3S8UVI3;A0A6C0SEM2;U5YMM6;U6BR82;Q6IUU8;U6BR74;F6IR39;F6IR40;B0BKZ4;S4VG21;F6IQS1;F4YTC9;E0YNM1;F6IQS8;F6IQS5;F4YTD6;F4YTD5;F4YTD4;F6IQS7;F6IQS3;F4YTD7;F4YTC6;F4YTD2;F6IQS6;F4YTE1;U5YKD2;F4NC21;F6IQV0;F6IQU6;F6IR37;F4NBX2;F4NC15;F4NC16;F4NBV8;F4NC17;F4NBY8;F4NC13;F4NBY6;F4NBX4;F4NBV2;F4NBW7;F4NBR4;F4NC08;F4NC09;F4NC10;F4NBW1;F4NBX3;G9FTK0;F4NBW4;F4NC14;F4NC12;F4NC11;F4NBV7;F4NBR6;F4NC05;F4NC03;F4NC02;F4NC01;F4NC00;F4NBZ9;F4NBZ8;F4NC04;A0A7D9FWA0;F4NBR7;F4NBR8;F4NBS0;F4NBX6;F4NBP0;F4NBQ5;F4NBV9;F4NBW6;F4NBW8;F6IR35;F4YTF5;F6IQT2;F6IQS4;F6IQU8;F4YTE6;D2KPG8;F6IQU4;F4YTF2;A0A0K2CX43;F4YTF8;F4NBW0;F4YTG0;F6IQT0;F6IQS9;F6IQU3;F6IQU2;F6IQU1;F6IQV5;F4YTE5;F6IQT4;C6L830;F6IQT5;F6IQT6;F4NBW9;F4NBX0;F4NBW5;Q2MCN7;F6IQU5;F4NC23;F4YTF1;F6IQY4;F4NBX1;F4NBY4;F4NBY3;F4NBY2;F4NBY1;F6IQT9;F6IQT8;F6IQT7;U6BQQ7;U6BQR0;O19626;Q5G274;A0A1D3TZL4;A0A1D3TZP6;A0A1D3TZL8;A5I8L1;F4NBW3;O19782;Q29655;R4ZGR8;Q29674;R4ZGR3;Q29653;A0A220A3H0;Q9GJ45;A6H567;Q95HN7;Q45FY3;H6SHQ4;F4NBU4;F4NBU5;Q45FY4;A0A583ZB54;B7VGE8;A0A076JYD5;R5A8Z1;R5AJZ3;A0A4P8UKL8;A0A1D3TZM9;U6BN32;F6IQ84;W8YM35;A0A1D3TZM2;A0A583ZBA0;R4ZGR1;A0A7D9FW58;A0A5H2X423;B2G3M3;A8YQE7;A0A678ZW60;G9DBH0;A6H580;Q95IB6;Q29654;G9FTK3;G9FTK4;A8YQF0;G9DBH1;B9WPQ8;Q860B6;R4ZGR5;A4URH6;A6YT91;A5PHT2;A7LB39;A0A6C0TEL6;Q45FY5;I6YW07;Q861E8;Q29657;A0A1W2PP29;A0A583ZAV6;A0A4Y5P8P3;I7LRB1;Q29656;A0A1W2PQS8;G3FIP8;I2GAD9;Q8WLS4;F4NBU3;A0A060VHG3;U6BQR3;U6BN69;A0A0K2CX04;U6BN95;U6BQP5;U6BR51;U6BN64;A0A6H2U458;U6BN67;A0A1D3TZN3;U6BN63;A0A482PI45;U6BN72;Q68J68;A0A059UE51;S5ZR34;A0A060D4B3;U6BMA7;U6BMA2;U6BQN8;U6BN77;A0A6H1PRN2;A0A0K3AW26;U5YJM7;A0A0K2CWY6;U6BM79;U6BN85;U6BQP1;U6BM93;A0A7D9FW65;U6BR57;U6BN81;A0A7D8ZZL2;U6BR60;U5YJN1;U6BR65;A0A6C0SGM6;A0A1J0KHA6;U6BN92;U6BN61;A5PHT6;A0A060DAG7;Q5ZGX1;U6BQQ4;A0A060D9N8;U6BN99;R5AJY6;A0A060D4A6;A0A060D0Q1;A0A060DAH3;A0A5J6BW28;U6BN60;U6BM88;A0A515I5M8;U6BN49;A0A482PCI4;A0A0S2C2H6;S6B303;A0A060D4S6;R5A8T8;U6BN89;R5A8X2;U6BM98;F4NC20;U6BN55;A0A0H4KBH8;U6BMB1;A0A165DE51;F6IR38;F6IQX8;U6BR87;A0A6C0M5D3;U6BR90;U6BN44;U6BMB8;Q5ZGX0;U6BN38;U6BN29;U6BMC2;U6BN41;F4NBU2;F4NC06;A0A141MJG7;U5YMF9;A0A7D3UM76;A0A1C3PHJ3;A0A6V6XYU4;A0A7D8ZIQ5;A0A6V6XYW6;A0A7D8VHG5;A0A7D8ZGQ7;A0A7D8Z6D1;A0A7D3QW60;A0A6V6XYF2;A0A7D3QHH9;A0A6V6XYZ0;A0A7D8V8H4;A0A7D8VHJ5;A0A7D8VS39;A0A7D8V8J0;A0A7D8V8K3;A0A6V6XYE9;A0A7D8ZBF3;A0A1C3PHF5;A0A1C3PHF6;A0A6V6XZB9;A0A7D8ZBB7;A0A7D8ZBD1;A0A1C3PHG2;A0A6V6XYF5;A0A6V6XYM6;A0A6V6XYL8;F6IR18;A0A6V6XYF3;A0A6V6XYH0;A0A2I8B356;A0A1C3PHF8;A0A6V6XYV0;A0A6V6XYG6;A0A6V6XYG1;A0A1C3PHH3;F4NBT0;F4NBX8;U5YJH4;F4NBT4;A0A7D3UMD9;A0A1C3PHH4;A0A7D8ZN44;A0A7D8ZN18;A0A6V6XZ08;F4NBV5;A0A6V6XZ16;F4NBP2;A0A7D8V8L2;F4NBU0;A0A6V6XZ39;A0A6V6XYD4;A0A6V6XZA6;A0A6V6XZD2;A0A6V6XZE0;A0A7D9BUZ6;F4NBP8;A0A7D5Q2Q8;F4NBP6;A0A7D5U6L7;A0A6V6XYZ8;A0A7D8V9M2;A0A7G1KWN1;A0A6V6XYY1;A0A6V6XZF5;A0A6V6XYC8;A0A6V6XYD2;A0A7D8ZGQ2;A0A7D8ZGR8;A0A7D9FZ53;A0A1C3PHF1;A0A7D8V7S2;A0A7D8V7P9;A0A7D8V7J5;A0A7D7L8G3;A0A6V6XYD6;A0A6V6XYD7;F4NBT9;A0A7D8ZN58;A0A7D8VG50;A0A7D8VG85;A0A7D8VS70;A0A7D8VGB3;F4NBT2;A0A7D8VGD0;F4NBR3;A0A7D9FZ40;A0A7D8VER0;A0A1C3PHE1;A0A7D9BUM6;A0A7D8VAH3;A0A7D8VDW9;A0A7D8VDT3;A0A7D8VDS6;A0A7D8VDM9;A0A7D8VG38;F4NBR5;A0A1C3PHE9;A0A7D8VAG5;F4NC22;F4NBP3;F4NBS2;F4NBP4;F4NBS1;F4NBR9;U5YMN1;F4NBY5;F4NBY7;A0A7D8VS45;A0A7D8VG53;A0A7D8VEI3;A0A7D8VEK9;A0A7D8VEP1;F4NBV1;F4NBP7;A0A7D8VAQ7;A0A1C3PHI8;A0A7D8VAM2;A0A1D0BST9;A0A7D8Z6C3;A0A7D8VS60;A0A2I8B360;A0A6V6XYY8;A0A7D8Z6B3;A0A7D8Z698;A0A076V2Z0;A0A7D8V9X3;A0A7D8VAI1;A0A7D8ZBC1;A0A1C3PHE7;A0A7D8V9M9;A0A1C3PHE8;A0A1C3PHG5;A0A6V6XYC1;A0A6V6XYD9;A0A7D8ZAI0;A0A7D8ZB93;A0A7D8Z694;A0A7D9BUK8;A0A7D8ZGS8;A0A7D8ZHU6;A0A7D8ZHX1;A0A7D8ZI19;A0A7D8ZIK3;A0A7D8ZIL6;A0A7D8VHD1;A0A7D8ZIP3;A0A7D8VS88;A0A7D8V9R5;A0A1C3PHF7;A0A7D8ZGS3;A0A1C3PHG1;A0A1C3PHE5;A0A1C3PHG4;F4NBU9;A0A6V6XZ27;F4NBT7;A0A7H1MG69;A0A7D9BUJ1;U5YJH8;F4NC07;A0A7D9FZ47;A0A7D9FX24;A0A7D9BUX4;A0A7D9FW82;A0A7D9BUK1;F4NBR2;A0A7D9BUK3;A0A7D9BV06;F4NBQ2;F4NBR1;F4NBR0;F4NBQ9;A0A7G1K7K4;B7XH58;F6IQT3;A0A7D9BUH4;A0A7D9FWT9;A0A7D9FWM7;A0A7D9FWF5;A0A7D9BUK0;A0A7D9BUG4;A0A7D9BUG6;A0A7D9BUH5;A0A7D9BUI7;F4NBS3;A0A7D9BUH6;A0A7D9BUH7;F4NBT6;A0A1C3PHH6;A0A7D9BUI3;F4NBQ3;F4NBQ4;F4NC18;A0A1C3PHH9;F4NBY9;A0A7G1K9L7;U5YJG6;F4NBZ0;F4NBZ1;F4NBZ2;F4NBZ3;Q8WLR8;F6IR45;U6BR70;G9FTJ9;A0A8F2EVX5;A0A8E7F001;F4NBZ4;A0A7D4WYW1;A0A1C3PHJ4;A0A7D9BVP8;F4NBS7;F4NBV6;F4NBS4;F4NBS5;F4NBS6;F4NBQ8;F4NBQ7;F4NBS8;F4NBV4;F6IQY3;F4NBV3;F4NBS9;A0A7G1KAN8;A0A7G1K7D9;A0A5B8RNS7;A0A7D9FWZ5;A0A7L4X7J8;A0A7L4X6S1;A0A7L4X8R1;F4NBP9;A0A7D9FYQ9;A0A7D9FYT0;A0A7D9FX16;F4NBU8;A0A7L7TQN3;A0A7D9FZ88;A0A7D8ZZG7;A0A7L7TUM2;H2DDR7;A0A7L7TUD1;A0A7L7TRR1;A0A7L7TMM4;A0A7D9FYT6;A0A7L7TME7;A0A7D9BUI6;A0A7L7TMA5;A0A7D9FXD2;A0A7L7TMB7;A0A7D9BUY4;A0A0U2NUY6;A0A7D9FXW2;A0A7D9FYQ0;A0A7D9FYP3;A0A7D9FY00;A0A7D9FXG8;F4NBT5;A0A7D9FXY3;A0A7D9FXX5;A0A7D9FXV8;A0A7D9FYR7;F4NBT3;A0A7D9FXK7;A0A7D9FXH0;A0A7L7TMC7;A0A7D9FXF3;F4NBP5;A0A0S2IIS6;F4NBT1;A0A7L4X7C0;A0A7L4X7E6;A0A7D9BUJ2;A0A7L4X757;A0A7D9FXF9;A0A1C3PHE4;F4NBV0;A0A7L4X724;F4NBQ1;A0A7L4X6W6;A0A7L4X6W3;A0A2I7FSU0;A0A173AD63;A0A7L4X6V0;A0A7L4X6U7;A0A7D9AMX6;A0A7L4X6S8;A0A7L4X739;F4NBQ0;A0A7D9FY31;A0A7G1L276;A0A7D9BUJ9;A0A7D9BUJ5;A0A7D9BUJ7;Q29928;A0A1W2PQZ3;Q30210;Q29926;Q29929;A0A128DYT3;A0A1W2PQE2;Q29930;Q9UM27;Q29931;Q29945;Q29947;A0A376A8H6;B3VN05;Q5QR42;A0A1T4J273;Q68J66;F4NC19;U5YJL8;K4IA16;Q68J67;U5YMP0;U5YMR3;F4NBZ5;F4NBW2;A0A5P8DIW9;A0A6G7GZB3;A0A345F7A5;D9ZNA7;U5YMR8;U6BMB5;F4NBZ6;F4NBQ6;A7DZQ5;F4NBZ7;F6IR50;A0A2H5CPE7;Q06FC3;Q6VS85;A0A078N209;A0A2Z5XVT0;F4NBT8;F6IR49;Q5UAG1;S5LSK2;D6CIC2;D5H3T7;D3HIE9;F4YTF9;A0A1L5IUQ9;A0A583ZBB3;A0A858LNW9;A0A8E4J3V5;A0A291HH06;A0A5B9RL24;A0A4Y5UM57;C5J403;A0A1G4HPW7;A0A223PYJ1;A0A286R620;A0A2H4UK09;A0A2I8B366;A0A2R4SAB4;A0A3S6RFQ4;A0A3S6RFS2;A0A3S6RIE6;A0A3S6RIG1;A0A2I8B3D2;A0A2K9UYU4;C6K6I2;A0A858LJW5;A0A678ZWZ9;A0A858LH00;A0A858LFR4;A0A858B7V8;A0A6S7XXK2;A0A6M8PX90;A0A6H2U3Y3;A0A6B7KQA3;A0A6B7FWN8;A0A679A0K1;A0A678ZWW4;A0A678ZIU4;A0A6C1HWD8;A0A5A4LJ52;A0A8E4J6I8;C6K6I3;D5L9J7;D7GM40;I3ZN85;A0A5H2V1T5;A0A142J248;A0A346HFZ2;X2L7S8;A0A1W2PP67;A0A4Y7LLQ1;A0A1W1B5N1;A0A5H2UTD7;A0A5H2UFB6;A0A5B9ZQY0;A0A4P8DJZ1;A0A4P2SQN1;A0A455JS00;A0A3S8XG76;A0A3S8IFC7;A0A3S6RFK6;A0A5J6SE57;A0A3G5BD33;A0A2U9AEP8;A0A858LKI8;A0A858LKH8;A0A7S5GRW1;A0A6B7FTF3;A0A6C5NEV1;A0A1W1B6A8;A0A678ZH29;A0A1W1B686;A0A375B7H4;A0A4P2SQP7;A0A678ZGX9;A0A6B7IG09;A0A7S5L7Q0;A0A7S5GS55;A0A678ZVS4;A0A678ZWU3;A0A6B7FUZ1;A0A6B7FWQ3;A0A6B7IEU8;B0BF01;Q206J8;M9TME2;M5EFF8;M1XK38;K7SUH6;I7EQF7;I6S8T6;Q9BD14;A0A2P1K6F1;A0A515HFK3;A7MAE1;A0A2R3U9Y2;A0A2Z5ZMZ9;A0A2S1B674;A0A387L8E4;A0A3G2LMM0;B1PMG1;S5T475;A0A4Y6GW76;Q4QZC0;Q4VYU3;A0A0H5DC60;A0A1G4HPT4;Q95J05;A0A1B1SMS4;Q95IB1;B0LV25;C6KF02;F8KA50;E5G961;E0WN61;D7NMJ8;D1H0T5;C6KGV6;B2NJ18;N1NUT9;F8LSY1;G0Z2K6;G9HZ41;Q6F3G7;Q6F3G6;Q6F3D8;D9UB06;Q5NTA2;M9R644;Q95IH9 HLA-A;HLA-A24AK;HLA;HLA-B;HLA-ABC;HLA-A*01;DKFZp686N10220;HEL-S-83;HLA-B57;HLA-B*3512;HLA-B*1513;HLA-B35;HLA-A*0226;HLA-DQB1;HLA-A*33;HLA-A*02;HLA B;B*56;HLA-B*27;HLA-B*;HLA-Bw62.4;HLA-Bw62.1;HLA-Bw62.3;HLA-Bw62.5;HLA A;MHC class I HLA-A;HLA-A*0201V3;HLA-A*31;B-3501;HLA-B41;B-1510 HLA class I histocompatibility antigen, A-3 alpha chain;Beta-2-microglobulin;HLA class I histocompatibility antigen, B-7 alpha chain no no 0 0 0 6.5 0.5 1 1 36.153 36.217 4 3.9862E-06 7791 20230619_1887_Aki_TMTPro18x_K_F7 143.42 124.83 80310 60468 76263 79010 77737 90217 97887 103010 128390 113250 100580 122890 140680 115180 85412 138300 129010 137310 74192 55529 77867 78432 81256 90643 98445 104590 127990 114220 106340 124010 139700 120310 90523 138390 123070 130400 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 161300000 31574 1147 29665 59362;59363 47925 47925 1 9606 Homo sapiens -0.022256003652501022 YTCIAGNSCNIK Unmodified 1399.6224 0.6224199 3847 Q13308;Q13308-6;Q13308-2;Q13308-5;Q13308-3;Q59FV9 PTK7 Inactive tyrosine-protein kinase 7 yes no 0 0 0 1.5 0.5 1 1 46.596 46.635 3 1.6259E-05 12887 20230619_1881_Aki_TMTPro18x_K_F2 128.36 114.7 182640 136090 154620 154990 171330 202120 181820 193810 212820 227970 262660 261350 236410 213640 209920 249970 290650 260290 168580 124800 159670 155650 177140 200610 183750 199390 217050 229520 265940 262190 241000 223800 218590 251090 277100 247220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 144110000 31575 3847 29666 59364;59365 47926 47926 1 9606 Homo sapiens -0.06140641745173525 YTCQELQR Unmodified 1096.4971 0.49714303 138 H7C441;C9JXG5;F8WCP5;A0A024R1D6;Q13769;C9JXU6;F5GZF3;C9JCL9 THOC5;hCG_2011153 THO complex subunit 5 homolog yes no 0 0 0 4 0 1 37.137 37.181 2 0.0013803 8397 20230619_1883_Aki_TMTPro18x_K_F4 118.06 101.52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31576 138 29667 59366 47927 47927 1 9606 Homo sapiens -0.04724565819287818 YTCSFCGK Unmodified 1021.3997 0.39973717 3698 P61513;Q6P4E4;E9PEL3;G5E9R3;C9J4Z3;M0R0A1;M0R2L6;A6NKH3 RPL37A;RPL37AP8 60S ribosomal protein L37a;Putative 60S ribosomal protein L37a-like protein yes no 0 0 0 1.5 0.5 1 1 44.962 45.003 2 0.00073212 12282 20230619_1880_Aki_TMTPro18x_K_F1 157.34 137.56 627910 492460 541580 569630 684570 749410 711680 682400 835930 765590 712760 653270 835530 657840 609100 922400 835750 729230 579800 451610 559710 571360 700770 742710 719550 703790 839880 766190 741810 669070 838030 692480 637560 910930 796710 695060 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1425800000 31577 3698 29668 59367;59368 47928;47929 47928 2 9606 Homo sapiens -0.1101067101976696 YTDLNSNDVTGLR Unmodified 1466.7001 0.70013617 3907 Q15007;A0A087X1R4;Q15007-2 WTAP Pre-mRNA-splicing regulator WTAP yes no 0 0 0 5 0 1 49.362 49.438 2 4.8638E-05 13509 20230619_1885_Aki_TMTPro18x_K_F5 123.67 110.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31578 3907 29669 59369 47930 47930 1 9606 Homo sapiens -0.014545892838214058 YTDQGGEEEEDYESEEQLQHR Unmodified 2570.0317 0.031713237 412 H3BNT2;A0A024R6U3;O75208;B4DIV2;H3BSJ5;B4DEE3;H3BPC6;B4E0U3;H3BRC0;H3BPW3;H3BVA5;O75208-2 COQ9;hCG_2025883 Ubiquinone biosynthesis protein COQ9, mitochondrial yes no 0 0 0 1 0 1 41.797 41.797 3 2.6011999999999998E-67 10882 20230619_1880_Aki_TMTPro18x_K_F1 311.1 308.63 12180 12592 12595 15392 17263 16922 19622 20356 17787 17287 23647 23004 20792 21293 19046 22114 19121 20285 11284 11542 12850 15336 17596 17078 19591 20473 18444 17803 23857 23050 21247 22038 19420 22104 18302 19282 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 194630000 31579 412 29670 59370 47931 47931 1 9606 Homo sapiens -0.1905013514883649 YTEGVQSLNWTK Unmodified 1424.6936 0.69359423 4746 Q9Y5B9 SUPT16H FACT complex subunit SPT16 yes yes 0 0 0 8 0 1 55.749 55.811 2 3.7977E-10 16062 20230619_1888_Aki_TMTPro18x_K_F8 223.77 206.94 60484 52881 59577 57197 50597 71230 64867 61694 65103 78309 72783 69398 82202 65368 75401 79544 78130 80228 55945 48445 60469 57618 53759 70725 64603 64120 66691 77967 74714 70723 83236 68349 76966 79735 74742 76186 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 54364000 31580 4746 29671 59371 47932 47932 1 9606 Homo sapiens -0.0017648244454449014 YTELPHGAISEDQAVGPADIPCDSTGQTST Unmodified 3116.3881 0.38805267 4523 Q9H773;H3BSA6;H3BPN2 DCTPP1 dCTP pyrophosphatase 1 yes no 0 0 0 2.5 0.5 2 2 56.115 56.142 3;4 5.7092E-10 17048 20230619_1881_Aki_TMTPro18x_K_F2 104.51 98.608 44725 36281 41932 50151 36372 47444 45122 45052 54799 58115 54713 52464 62518 53130 48878 65317 64470 67018 41332 33329 42803 49450 38532 48101 45298 46550 55306 57869 56451 53556 62926 55442 50894 65484 61552 63626 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 92971000 31581 4523 29672 59372;59373;59374;59375 47933;47934;47935;47936 47933 4 9606 Homo sapiens -0.08548583093079287 YTELQLEAAK Unmodified 1164.6027 0.60265396 876 A0A087X0H9;Q5T8P6-5;Q5T8P6-4;Q5T8P6-3;Q5T8P6-2;Q5T8P6;E2PSN0;B4DZH7 RBM26 RNA-binding protein 26 yes no 0 0 0 5 0 1 52.12 52.194 3 0.082172 14713 20230619_1885_Aki_TMTPro18x_K_F5 38.875 13.533 48014 47656 46007 51330 49278 56146 57951 50589 66222 63373 62887 63821 77065 63459 65985 79561 69701 89292 44441 43639 46993 51610 51181 56301 58159 52432 66878 63403 65307 64782 77665 66357 67580 80187 66789 84635 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20795000 31582 876 29673 59376 47937 47937 1 9606 Homo sapiens 0.026936735780054732 YTEMDYAR Oxidation (M) 1063.4281 0.42806041 620 Q9UKD2;A0A024RAE1 MRTO4;C1orf33 mRNA turnover protein 4 homolog yes no 0 1 0 2.5 0.5 1 1 36.645 36.702 2 0.012271 8351 20230619_1881_Aki_TMTPro18x_K_F2 92.491 79.96 197110 147280 162430 199210 209360 227640 214530 210260 254600 223950 249360 242150 237730 203570 219190 263480 270460 249520 181900 135300 168820 197190 213990 227600 217190 216390 256800 226220 255520 243800 242180 214390 226290 262900 258130 237220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 183080000 31583 620 29674 59377;59378 47938;47939 47938 357 2 9606 Homo sapiens -0.10111649838836456 YTEMDYAR Unmodified 1047.4331 0.43314579 620 Q9UKD2;A0A024RAE1 MRTO4;C1orf33 mRNA turnover protein 4 homolog yes no 0 0 0 3 0 1 42.198 42.26 2 6.825E-05 10562 20230619_1882_Aki_TMTPro18x_K_F3 184.89 134.87 149490 126720 143840 154310 160320 181060 186720 159760 181590 186790 193920 182890 220120 153630 191740 214780 208420 176330 138220 116230 146930 153910 165910 180570 186510 165470 185840 187210 199460 184950 222250 162770 196510 212650 199030 168000 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 103940000 31584 620 29674 59379 47940 47940 1 9606 Homo sapiens -0.08867345976227625 YTEQITNEK Unmodified 1124.535 0.53496832 428 A0A024R745;H7BYD0;Q16718;F8WAS3;C9IZN5;A0A7I2V2W4;A0A087X1G1;A0A7I2V3L8;Q16718-2 NDUFA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes no 0 0 0 3 0 1 43.26 43.328 3 0.0020281 11085 20230619_1882_Aki_TMTPro18x_K_F3 90.263 77.636 42912 37088 50020 51397 53699 60473 58109 54190 69692 40802 55540 56293 56292 47866 51193 54729 62315 58989 39748 34062 50292 50835 55606 60298 58675 55462 69659 42485 57687 56196 57204 50008 52777 55118 59492 55996 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81408000 31585 428 29675 59380 47941 47941 1 9606 Homo sapiens -0.022317763528235446 YTFAAHMDGTYK Unmodified 1403.618 0.61798644 2561 B4DP27;Q6FHT8;Q15363;E7EQ72 RNP24;TMED2 Transmembrane emp24 domain-containing protein 2 yes no 0 0 0 4.5 3.5 1 1 48.377 48.411 3 1.7656E-13 13723 20230619_1880_Aki_TMTPro18x_K_F1 209.64 197.48 376950 337840 376030 377270 368310 404820 448230 432640 465690 430900 456920 450130 433190 382500 459870 479340 482130 436800 348760 309560 382000 378340 385220 408000 447850 440050 472930 436140 468270 453940 444270 401750 468480 477750 460770 415490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 413020000 31586 2561 29676 59381;59382 47942;47943 47942 2 9606 Homo sapiens -0.06767782896463359 YTFAAHMDGTYK Oxidation (M) 1419.6129 0.61290107 2561 B4DP27;Q6FHT8;Q15363;E7EQ72 RNP24;TMED2 Transmembrane emp24 domain-containing protein 2 yes no 0 1 0 7.5 0.5 1 1 43.564 43.609 3 4.2483E-05 10924 20230619_1888_Aki_TMTPro18x_K_F8 117.03 101.89 277230 216410 248830 288830 351180 323060 341040 347510 336670 282940 318890 318970 299050 259780 332320 344790 314850 316180 256050 198750 256860 286140 355860 324740 344260 351570 342380 290480 327290 320370 307450 274310 336450 343500 301420 300600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 303880000 31587 2561 29676 59383;59384 47944;47945 47945 1559 2 9606 Homo sapiens -0.08012086759094927 YTGEDFDEDLR Unmodified 1358.5626 0.56263964 3881 Q14204;A0A2R8Y706;A0A7P0TA13;A0A2R8Y5T0;A0A7P0T9C4;A0A7P0T9R4;A0A7P0TAW9;A0A7P0T7V5;A0A7P0T916;A0A7P0TBJ7;A0A7P0T8N2;A0A7P0TAF3;A0A7P0TB75;A0A2R8Y6H2;A0A7P0T9K2;A0A7P0T9F1;A0A7P0T8W5;A0A2R8YFZ7;A0A7P0TAM4;A0A7P0T825 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 1 0 1 50.017 50.017 2 5.2604E-50 14354 20230619_1880_Aki_TMTPro18x_K_F1 316.68 291.25 298300 245170 273640 300630 246760 299610 283120 295700 367850 432820 474740 535910 489840 446260 368510 548600 514110 571640 275650 224920 279800 299050 259840 302940 286160 306060 374430 433090 482920 536190 493980 468510 385930 550390 490890 542490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 408730000 31588 3881 29677 59385 47946 47946 1 9606 Homo sapiens -0.10229917883225426 YTHILNR Unmodified 915.49265 0.49265 4475 Q9BZE2;E9PRI9 PUS3 tRNA pseudouridine(38/39) synthase;tRNA pseudouridine synthase yes no 0 0 0 2.5 0.5 1 1 36.485 36.542 3 0.0010099 8298 20230619_1881_Aki_TMTPro18x_K_F2 154.09 104.06 41596 27818 46408 48794 55344 60495 59188 57957 65574 55638 64388 63940 63298 55407 56090 59371 69615 64360 38456 25652 46900 47672 56862 60190 59644 59319 66356 56623 66063 64251 64317 57640 57924 59876 66440 61096 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26358000 31589 4475 29678 59386;59387 47947 47947 1 9606 Homo sapiens 0.03152337820131379 YTHLVDQDTTSFDSAWGQESAQNTK Unmodified 2828.2525 0.25254547 3657 P55081 MFAP1 Microfibrillar-associated protein 1 yes yes 0 0 0 5 0 1 55.321 55.386 3 3.6301E-05 16005 20230619_1885_Aki_TMTPro18x_K_F5 75.112 69.017 4935.8 2626.5 3390.8 2796.2 2173.5 4087.2 2693.5 5430.3 2757.9 3878.9 4816 4772.8 4404.5 4265.7 6336.3 3756.1 3049.4 5815.9 4542.2 2411.3 3552 2831.7 2385.8 4060.6 2699.1 5402.2 2889.9 4023.9 4830.4 4788 4598 4390.6 6214.7 3906.3 2968.6 5492 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 15914000 31590 3657 29679 59388 47948 47948 1 9606 Homo sapiens -0.08845070101642705 YTIENPR Unmodified 891.44503 0.4450311 1229 A0A140VK49;Q7KZF4;B2R5U1;Q59FF0;B3KU67;B4E299 SND1 Staphylococcal nuclease domain-containing protein 1 no no 0 0 0 4.5 0.5 1 1 38.012 38.08 2 0.013637 8712 20230619_1885_Aki_TMTPro18x_K_F5 113.7 80.338 104080 82417 97722 101390 119230 120060 118250 110240 148190 131080 137750 143160 156430 134120 125870 152120 155980 142740 96168 75623 100130 101080 122080 119800 120180 113870 148850 131790 142640 144480 157640 139570 130330 152000 148860 135730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 417500000 31591 1229 29680 59389;59390 47949 47949 1 9606 Homo sapiens -0.005033611707062846 YTIGHAWTTDYGCSDSK Unmodified 1960.8261 0.82614132 3598 P48147;Q9UM02;B2RAH7;A0A499FJL1 PREP Prolyl endopeptidase yes no 0 0 0 6.5 0.5 1 1 49.611 49.692 3 4.4145E-14 13422 20230619_1887_Aki_TMTPro18x_K_F7 165.93 154.01 99193 81310 100370 102810 81703 98107 115430 114910 112260 116880 116620 126190 132140 114240 119890 146360 148980 156780 91731 74618 101620 102030 87264 99923 114360 116290 114750 118260 120210 127310 133830 119950 123880 147050 142320 148780 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 129310000 31592 3598 29681 59391;59392 47950;47951 47951 2 9606 Homo sapiens -0.1158387056070751 YTIGLGQAK Unmodified 949.52328 0.52328142 79 Q8N995;A0A024R059;Q01581;D6RIW1 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 49.689 49.756 2 0.091897 13973 20230619_1882_Aki_TMTPro18x_K_F3 71.425 53.39 163510 137050 142700 147370 113200 130310 131010 135360 159000 122170 112420 111700 130760 102500 108920 139910 128680 114520 151060 125560 146250 147850 120540 133230 131990 137630 158470 123920 118320 113620 131820 108020 112400 138490 122830 109100 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 133730000 31593 79 29682 59393;59394 47952 47952 1 9606 Homo sapiens 0.046500714145167876 YTIHSQLEHLQSK Unmodified 1582.8104 0.81035532 4458 Q9BWJ5 SF3B5 Splicing factor 3B subunit 5 yes yes 0 0 0 4.5 3.5 1 1 43.322 43.327 4 1.7861E-15 10790 20230619_1888_Aki_TMTPro18x_K_F8 203.11 169.89 183590 152430 203100 227050 214520 265190 233970 242910 243040 247350 296800 329430 294710 249050 243810 227800 324570 346240 169920 140140 205060 223530 222580 264580 235160 249830 249200 252160 302070 327730 298440 258580 253180 235950 309920 327530 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 417980000 31594 4458 29683 59395;59396 47953;47954 47954 2 9606 Homo sapiens 0.0422625577521103 YTIIPLNK Unmodified 960.56442 0.56441796 128 O95347;A0A024R158;B7ZLZ7;A8K984;B3KMB1;O95347-2;Q05BV1;Q2KQ72 SMC2;SMC2L1 Structural maintenance of chromosomes protein 2;Structural maintenance of chromosomes protein yes no 0 0 0 3.5 0.5 1 1 56.919 56.938 3 0.001886 17190 20230619_1882_Aki_TMTPro18x_K_F3 109.86 32.188 43289 31716 35230 37656 30261 41588 40509 37408 43268 48475 53640 46313 53956 42115 47611 50462 48041 48633 39941 29101 36410 37595 32184 41645 40343 38809 44344 48328 54506 46996 54719 44042 48566 50469 45965 46209 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 50564000 31595 128 29684 59397;59398 47955 47955 1 9606 Homo sapiens 0.08255832453994572 YTILHQR Unmodified 929.5083 0.50830006 3664 Q86SY9;P56282-2;P56282-3;P56282 POLE2 DNA polymerase epsilon subunit 2 yes no 0 0 0 2 0 1 35.804 35.861 3 0.0010099 8036 20230619_1881_Aki_TMTPro18x_K_F2 154.09 132.57 25940 19452 22750 24311 27403 26297 25232 25976 34232 18830 19394 19571 19990 17355 20538 23641 24778 17676 23949 17855 23448 24179 28030 26442 25837 26370 33729 19466 20627 19777 20427 18295 21123 23316 23617 16878 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 8548800 31596 3664 29685 59399 47956 47956 1 9606 Homo sapiens 0.04072624337186426 YTISQEAYDQR Unmodified 1372.6259 0.62590859 1550 A0A494C0X0;Q99426-2;Q99426;K7EP07;K7EK42 TBCB Tubulin-folding cofactor B yes no 0 0 0 3.5 0.5 1 1 43.289 43.346 2 3.1625E-50 11069 20230619_1882_Aki_TMTPro18x_K_F3 326.07 297.86 195160 157700 158480 192520 177640 201370 210920 195470 215470 248920 273450 274810 264490 240100 248820 267370 278480 303890 180160 144680 164560 191650 183980 202830 210860 201600 221660 249430 277460 276600 269570 250240 255040 270250 266330 288150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 246470000 31597 1550 29686 59400;59401 47957;47958 47957 2 9606 Homo sapiens -0.0454993237533472 YTITPVK Unmodified 820.46945 0.46945494 1593 A0A669KAX9;Q5T653;C9IY40;B4DVE2;C9JZW2;C9JZG7 MRPL2 39S ribosomal protein L2, mitochondrial yes no 0 0 0 1.5 0.5 1 1 47.764 47.799 2 0.0031075 13430 20230619_1881_Aki_TMTPro18x_K_F2 128.57 89.348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31598 1593 29687 59402;59403 47959;47960 47960 2 9606 Homo sapiens 0.05203898982813371 YTIVQQQIPSFLQK Unmodified 1691.9247 0.9246568 1724 A0A804HK74;F2Z2B9;B3KRS1;A0A804HI27;A0A804HL95;A0A804HJQ4;A0A804HJS9;Q53EQ3;A0A804HJ08;A0A804HJH7;Q9BSJ2;Q9BSJ2-4;B4DS45;Q9BSJ2-3;B3KTU7 TUBGCP2 Gamma-tubulin complex component 2 yes no 0 0 0 5 0 1 62.461 62.508 3 0.001601 19035 20230619_1885_Aki_TMTPro18x_K_F5 83.499 64.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31599 1724 29688 59404 47961 47961 1 9606 Homo sapiens 0.10637145537316428 YTIYSPK Unmodified 870.44872 0.4487195 1603 Q9P2J5;A0A6I8PIV1;B2RCM2;A0A6I8PL42;B4E266;Q9P2J5-2;A0A6I8PIT3;B4DER1;A0A6I8PRS0;A0A6I8PS05;A0A6I8PLB8;A0A6I8PLB3;A0A6I8PIP7;A0A6I8PTV8;A0A6I8PRU9 LARS Leucine--tRNA ligase, cytoplasmic yes no 0 0 0 2.5 0.5 1 1 48.115 48.19 2 0.0029428 13578 20230619_1881_Aki_TMTPro18x_K_F2 158.36 106.9 117710 127390 135030 121110 144890 149250 161550 139590 140050 102130 106640 76528 101490 71922 174490 103900 106740 80394 109190 116500 135800 123320 149940 148670 161210 142310 142450 104510 110750 78871 107060 76089 172010 102810 102600 76704 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109560000 31600 1603 29689 59405;59406 47962 47962 1 9606 Homo sapiens 0.008313086031421335 YTLETRPNQEGIDVR Unmodified 1789.8959 0.89587586 1507 P14735;A0A7I2V610;A0A3B3ISG5;A0A7I2V2P6;A0A7I2V3E3;A0A7I2YQV5;A0A7I2V4Q3;A0A7I2V2S1;A0A7I2V612;A0A7I2V373;A0A7I2YQS6;A0A7I2V4A4;A0A7I2V634 IDE Insulin-degrading enzyme yes no 0 0 1 4.5 0.5 1 1 43.527 43.589 3 8.6917E-08 11100 20230619_1883_Aki_TMTPro18x_K_F4 135.86 102.23 194520 128030 168250 168500 190410 210000 203620 204310 256600 246460 240310 229110 267330 229180 206800 270940 255360 236720 179450 117650 173440 167390 196530 209050 206150 210160 257820 246370 248350 233450 269160 238570 214380 269520 243730 225270 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 203080000 31601 1507 29690 59407;59408 47963;47964 47963 2 9606 Homo sapiens 0.03252376170189564 YTLPPGVDPTQVSSSLSPEGTLTVEAPMPK Unmodified 3097.5529 0.55293316 3383 V9HW43;P04792;A0A6Q8PGK1;B4DL87 HEL-S-102;HSPB1 Heat shock protein beta-1 yes no 0 0 0 8 0 1 63.305 63.327 3 4.3577E-10 19254 20230619_1888_Aki_TMTPro18x_K_F8 108.5 97.789 15124 10899 13827 14253 10582 16449 12404 13941 16151 21764 21007 25741 23684 22283 21292 27542 24833 27061 13964 10011 14111 14145 11346 16397 12533 14621 16463 21690 21473 25820 23989 23363 21924 27548 23741 25700 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141630000 31602 3383 29691 59409 47965 47965 1 9606 Homo sapiens 0.08805880784757392 YTPEEIAMATVTALR Unmodified 1664.8444 0.84435757 26 A0A024QZ64;P09972;B7Z1Y2;B7Z3K9;B7Z1N6;B7Z3K7;A8MVZ9;B7Z1Z9;B7Z1L5 ALDOC Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C yes no 0 0 0 8 0 1 64.683 64.703 3 2.2716E-14 19814 20230619_1888_Aki_TMTPro18x_K_F8 186.67 175.15 24611 19153 22740 24136 18332 21413 25425 27624 25747 31331 34219 33947 35931 30677 27786 39331 36105 38921 22736 17579 23201 23939 19589 21999 25253 27886 26564 31524 34774 34250 36233 32207 28923 39326 34484 36962 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 95814000 31603 26 29692 59410 47966 47966 1 9606 Homo sapiens 0.03852916151959107 YTPPPHHIGK Unmodified 1145.5982 0.5981777 3270 Q6IBA0;O43920 NDUFS5 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 yes no 0 0 0 1.5 0.5 1 1 34.378 34.407 4 0.024868 7435 20230619_1881_Aki_TMTPro18x_K_F2 64.297 54.61 66300 57942 70988 84553 110130 116440 89910 92065 110120 78071 91625 94813 91613 80823 81751 96154 103000 83824 61368 53245 72388 83545 110730 114740 92427 95355 110220 80241 94890 95054 93085 84590 84548 95662 98211 79818 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 169930000 31604 3270 29693 59411;59412 47967 47967 1 9606 Homo sapiens 0.031202539457581224 YTPSQQGVAFNSGAK Unmodified 1553.7474 0.74742071 3859 Q6I9S2;Q13573;G3V3A4;G3V4X8;B7Z9X2;B4DY36;A0A024R6E3;B4DEG7;Q6P151;Q0D2M5 SNW1 SNW domain-containing protein 1 yes no 0 0 0 1.5 0.5 1 1 47.019 47.057 3 3.8824E-14 13155 20230619_1880_Aki_TMTPro18x_K_F1 181.26 161.15 128960 95513 116060 129170 137440 143230 140550 136330 183680 148980 147340 142360 167310 132290 141240 157830 159980 162870 119080 87750 119370 127830 141190 143610 142810 140100 183180 149780 153700 144510 168850 138210 145210 158430 152910 154630 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 254740000 31605 3859 29694 59413;59414 47968;47969 47968 2 9606 Homo sapiens -0.00730310012818336 YTPVQQGPVGVNVTYGGDPIPK Unmodified 2285.1692 0.16919718 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 0 4.5 3.5 1 1 58.753 58.774 3 2.7723E-17 17277 20230619_1888_Aki_TMTPro18x_K_F8 161.02 145.08 84466 60598 73333 70871 92455 115990 96565 90701 92342 98915 103880 114120 108530 98809 104840 111170 107450 122260 77958 55597 75720 71319 94740 113250 96984 94603 94826 99992 106330 114620 110480 103060 106860 112130 102890 115950 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 411700000 31606 3484 29695 59415;59416 47970;47971;47972 47971 3 9606 Homo sapiens 0.07801934769804575 YTQPNICR Unmodified 1050.4917 0.49166372 3892 Q4ZG57;Q14566 MCM6 DNA replication licensing factor MCM6 yes no 0 0 0 7.5 0.5 1 1 37.766 37.791 2 0.0009288 8565 20230619_1888_Aki_TMTPro18x_K_F8 169.26 126.23 392170 305780 311010 347130 370960 384120 369490 345350 436890 429320 452410 404680 464350 402220 367310 483920 489480 392400 361900 280370 323760 347690 380630 384910 374670 357790 441960 428780 463510 412120 469080 419150 382560 479580 466480 374030 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 597140000 31607 3892 29696 59417;59418 47973;47974 47974 2 9606 Homo sapiens -0.03156244611091097 YTQSNSVCYAK Unmodified 1319.5816 0.58160094 3534;2560 B4DP06;H7C1S2;V9HWH7;P31939;B2R7P8;P31939-2 ATIC;HEL-S-70p Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase no no 0 0 0 4.5 3.5 1 1 42.574 42.575 2;3 7.6644E-17 11216 20230619_1880_Aki_TMTPro18x_K_F1 277.76 250.24 194620 125270 195980 207450 233400 242340 213390 227410 257010 221800 247510 251470 251480 222430 232590 184280 302130 261540 179730 115450 199570 203080 238870 241980 217730 233170 258920 225430 254580 252810 255770 228470 240370 190310 288120 247740 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 259770000 31608 2560;3534 29697 59419;59420 47975;47976;47977 47975 3 9606 Homo sapiens -0.06540659793154191 YTQVGPDHNR Unmodified 1185.5527 0.55268407 3811 Q08211;Q58F26;Q6PJK6 DHX9 ATP-dependent RNA helicase A yes no 0 0 0 5.5 1.71 1 1 1 1 1 1 29.837 29.902 3 1.3233999999999998E-19 5557 20230619_1882_Aki_TMTPro18x_K_F3 209.21 197.04 111560 70515 97446 88294 101500 112660 119850 123330 125570 110390 126770 136080 115850 115770 98310 77941 128260 116080 102900 64777 100180 88078 105620 112300 119970 124870 127560 113030 129580 136150 117890 118050 101800 81169 122340 109900 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 1564999999.9999998 31609 3811 29698 59421;59422;59423;59424;59425;59426 47978;47979;47980;47981;47982;47983 47978 6 9606 Homo sapiens -0.0326701630729076 YTRPGLPTFSQEVLHK Unmodified 1871.9894 0.98938232 3013 G3XAG1;Q96ME7-3;Q96ME7;B4DES6;B7Z9P6;Q96ME7-2;Q658M0;B4E0X7 ZNF512;DKFZp666L156 Zinc finger protein 512 yes no 0 0 1 3 0 1 50.785 50.855 4 0.00075661 14550 20230619_1882_Aki_TMTPro18x_K_F3 85.619 65.238 263170 206780 231550 192790 209540 234530 228800 211130 291710 186580 192580 198180 208160 164110 288770 210100 215070 190680 243040 189280 237260 196660 220130 233600 231500 216700 289350 190470 203170 199560 215670 172860 287700 209580 206320 181410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 304710000 31610 3013 29699 59427 47984 47984 1 9606 Homo sapiens 0.08826720343290617 YTRPTPVQK Unmodified 1088.5978 0.59784335 1018 Q59GX6;A0A2R8Y4A4;B5BTY4;A0A2R8YFS5;A0A2U3TZJ9;A0A2R8YFR4;A0A0D9SG12;A0A2R8YCW1;A0A2R8YF78;A0A0D9SFB3;A0A0D9SF53;A0A2R8Y645;O00571;O00571-2;F6S8Q4;A0A2R8Y5G6;A0A2R8Y7T2;A0A2R8YDT5;B4DLU5;O15523;O15523-2;A0A2R8YDH3;A0A024R9A4;B4E010;B4E3C4;O15523-3;C9J081;C9J8G5;A0A2R8Y4D2 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 0 0 1 3 0.816 1 1 1 35.768 35.822 3 0.033911 7865 20230619_1882_Aki_TMTPro18x_K_F3 60.899 35.24 149270 108370 133430 131500 173360 188140 169880 159900 214190 145620 156220 125710 153610 117470 151150 134850 173830 112960 137800 99455 137450 131650 176890 185300 172760 164880 213180 147510 162700 128360 156700 122410 154880 134090 165680 107750 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 756120000 31611 1018 29700 59428;59429;59430 47985 47985 1 9606 Homo sapiens 0.057088342259021374 YTSIPTSVEESGKK Unmodified 1524.7672 0.7671531 1634 F8W7R3;B3KNW8;A0A6Q8PGF4;B7ZMF2;A0A6Q8PH09;Q9NVI1-2;Q9NVI1-1;Q9NVI1;H3BP78;A0A8Q3SIZ6;A0A8Q3SIW9 FANCI Fanconi anemia group I protein yes no 0 0 1 7.5 0.5 1 1 46.878 46.947 3 4.0814E-05 12181 20230619_1887_Aki_TMTPro18x_K_F7 106.32 91.057 53875 43233 52299 54587 56125 69280 52101 49070 67013 64559 65485 56767 68535 62583 61368 73394 68782 59154 49798 39678 53332 54366 57976 68462 53236 51946 67382 64230 67327 58226 69545 64902 63002 72759 65672 56371 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57286000 31612 1634 29701 59431;59432 47986 47986 1 9606 Homo sapiens 0.025760212072555078 YTSQIVGR Unmodified 922.48723 0.48723027 4692 Q9UNS2;B4DN01;H7C3P9;Q9UNS2-2;C9JLV5;K7ES36 COPS3 COP9 signalosome complex subunit 3 yes no 0 0 0 4.5 3.5 1 1 39.509 39.504 2 0.012388 9292 20230619_1888_Aki_TMTPro18x_K_F8 95.815 81.821 227440 177120 192130 247190 243380 254620 254350 237180 321880 282800 295390 316110 313100 269000 254620 301030 361210 320700 209980 162750 199210 243820 249110 256500 257780 244840 322970 284480 305160 317690 316360 280730 266050 302980 344290 304540 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 228320000 31613 4692 29702 59433;59434 47987;47988 47988 2 9606 Homo sapiens 0.02288614237670572 YTSQLPPLTAFILPSGGK Unmodified 1889.0299 0.02985015 2238 B2R6J3;Q96EY8;B4DHP4;S4R3P5 MMAB Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial yes no 0 0 0 6 0 1 64.735 64.779 3 2.0889E-06 20265 20230619_1886_Aki_TMTPro18x_K_F6 99.508 74.186 44459 40440 45599 46882 41845 43652 56220 50622 52525 51124 55261 51269 53837 45100 51518 57846 55190 53162 41147 37066 46184 46798 44097 44563 55732 51269 53813 51634 56490 51864 54877 47396 52666 57647 52756 50551 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70330000 31614 2238 29703 59435 47989 47989 1 9606 Homo sapiens 0.12089641943066454 YTTPEDATPEPGEDPR Unmodified 1773.7693 0.76933795 1073 A0A0S2Z3H8;A0A7I2V5R6;Q5JWF2;Q5JWF2-2;P63092-4;P63092-3;P63092;P63092-2;Q5JWE9;A0A0S2Z3S5;Q14455;A0A590UJQ9;A0A590UK28;Q5FWY2;A0A804HIH4;B0AZR9;A0A0A0MR13;A0A590UJF0;A0A590UJS2;A0A590UJY2;O60726 GNAS;GSA Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short yes no 0 0 0 1.5 0.5 1 1 42.135 42.174 3 3.0926E-08 11025 20230619_1880_Aki_TMTPro18x_K_F1 132 110.77 119640 93146 112900 125790 146550 153020 160270 134880 167130 151740 159560 162300 189440 142510 146840 154270 178570 163720 110550 85557 115850 124660 149840 152260 160910 139560 169580 152830 165370 163580 190260 148380 151840 155370 170440 155450 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 263500000 31615 1073 29704 59436;59437 47990;47991 47990 2 9606 Homo sapiens -0.08659594845585161 YTTPSGEVR Unmodified 1008.4876 0.4876242 2933 P55786;E9PLK3;B7Z899;B7Z4B2;A0A7I2V3W8;A0A7I2V389;P55786-2;B3KU93;A0A8V8TQ95;B3KTP2;A6NEC2;E9PPZ2;B7Z6T6;A0A7I2V604;E9PP11 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein yes no 0 0 0 3.5 0.5 1 1 35.417 35.47 2 5.6225E-06 7726 20230619_1883_Aki_TMTPro18x_K_F4 182.73 137.34 209710 144560 206180 215850 225070 226890 224360 236990 288020 231710 304680 294700 291340 260320 233770 261570 352990 315590 193700 133010 210050 212220 232210 228800 228300 241280 290190 236470 311060 295230 295230 269720 245430 265800 336330 299310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 300000000 31616 2933 29705 59438;59439 47992;47993 47993 2 9606 Homo sapiens -0.016280108331329757 YTTTQQVVK Unmodified 1066.5659 0.56587452 4061 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2 UBR4 E3 ubiquitin-protein ligase UBR4 no no 0 0 0 8 0 1 42.006 42.003 3 0.0025693 10315 20230619_1888_Aki_TMTPro18x_K_F8 75.378 53.915 31577 28205 32104 31861 36525 43781 43021 37303 48876 24548 27680 23053 23560 17004 30908 21400 28643 22904 29219 25847 32646 32038 37789 43209 43144 38226 48523 25497 29204 23289 24514 17991 31119 21549 27388 21760 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13143000 31617 4061 29706 59440 47994 47994 1 9606 Homo sapiens 0.03525421752101465 YTVNFLEAK Unmodified 1083.5601 0.56006086 4198 Q86X55-1;Q86X55;K7EQA8;Q86X55-2 CARM1 Histone-arginine methyltransferase CARM1 yes no 0 0 0 1 0 1 58.427 58.427 2 0.00047354 17863 20230619_1880_Aki_TMTPro18x_K_F1 119.68 85.428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31618 4198 29707 59441 47995 47995 1 9606 Homo sapiens 0.02162323240418118 YTVPGYR Unmodified 854.42865 0.42865276 219 A0A024R2Z6;Q9BVP2-2;Q9BVP2 GNL3 Guanine nucleotide-binding protein-like 3 yes no 0 0 0 1.5 0.5 1 1 42.372 42.412 2 0.055365 11142 20230619_1880_Aki_TMTPro18x_K_F1 83.801 71.37 316680 232180 304660 315330 354840 369150 343180 340130 408710 370540 408220 436380 454570 356320 364450 373590 450230 459070 292550 213330 311270 312270 364220 368540 348750 350310 412630 374930 420980 437110 458020 371350 376950 379930 430010 435090 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 141840000 31619 219 29708 59442;59443 47996 47996 1 9606 Homo sapiens -0.00438442336803746 YTVQDESHSEWVSCVR Unmodified 1980.8636 0.86358946 2907 P63244;E9KL35;J3KPE3;H0Y8W2;H0YAF8;H0YAM7;D6RHH4;D6R9L0;D6R9Z1;D6RFX4;B4DVD2;D6RFZ9;D6RBD0 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 4 0.816 1 1 1 45.957 46.023 3 1.2877E-91 12062 20230619_1885_Aki_TMTPro18x_K_F5 366.92 354.56 1148200 996240 1088700 1076300 1012200 1194000 1086500 1184800 1198300 1314700 1235000 1307000 1472700 1156900 1113900 1614700 1435100 1528600 1061600 912680 1109700 1082500 1060200 1198400 1095400 1214100 1217100 1321100 1275900 1322400 1478100 1222900 1159500 1608800 1370600 1452500 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4046099999.9999995 31620 2907 29709 59444;59445;59446 47997;47998;47999 47999 3 9606 Homo sapiens -0.08760779295107568 YTVQFSK Unmodified 871.44397 0.44396847 4208 Q8IX12-2;Q8IX12;A0A0C4DGG8;F5H2E6;F5H3E1;F5H1H2 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 0 0 0 2 0 1 49.373 49.432 2 0.0070017 14198 20230619_1881_Aki_TMTPro18x_K_F2 128.61 46.824 160280 123220 133730 156900 180260 185790 151300 172720 203930 151210 162750 151730 149440 130130 157340 179290 194640 141700 147950 113120 138860 156030 182850 185390 155880 176710 203010 154090 168270 153420 153420 137470 162020 177220 185500 135180 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164160000 31621 4208 29710 59447 48000 48000 1 9606 Homo sapiens 0.0031042446039464267 YTVYCSLIK Unmodified 1145.5791 0.57908174 4152 Q7L2H7;J3KNJ2;E9PN86 EIF3M Eukaryotic translation initiation factor 3 subunit M yes no 0 0 0 3.5 0.5 1 1 57.341 57.36 2 0.00077734 17243 20230619_1883_Aki_TMTPro18x_K_F4 138.4 21.36 188860 179270 151950 149780 205190 295630 198320 205730 312090 63517 61666 66397 71810 60544 96840 65300 67117 63436 174520 163860 158310 155690 209610 285710 203630 212460 300720 72493 75574 67187 74257 62896 96213 65554 64479 60286 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77985000 31622 4152 29711 59448;59449 48001;48002 48002 2 9606 Homo sapiens 0.012115365398130962 YTYEHDPITK Unmodified 1265.5928 0.59281755 1598 P42224;P42224-2;A0A669KB53;A0A669KBA4;A0A669KB56;A0A669KB68;A0A8V8TN81;A0A669KBI6;J3KPM9;A0A669KB52;A0A669KB75;E7EPD2 STAT1 Signal transducer and activator of transcription 1-alpha/beta;Signal transducer and activator of transcription yes no 0 0 0 4.5 0.5 1 1 42.452 42.515 3 0.00013394 10625 20230619_1883_Aki_TMTPro18x_K_F4 123.79 90.846 86430 64776 75504 97732 94431 109780 95848 103810 107510 121460 137030 133270 133250 119460 118910 140170 145490 140900 79794 59584 78038 96071 96705 109900 96953 106910 110090 122140 139000 134330 135480 124740 122750 140520 138910 133840 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 152830000 31623 1598 29712 59450;59451 48003 48003 1 9606 Homo sapiens -0.02935514427417729 YVAEFLEWAK Unmodified 1254.6285 0.62847478 405 H0YLY0;A0A024R6N2;Q9Y5S2;Q86XZ8 CDC42BPB Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK beta yes no 0 0 0 8 0 1 64.694 64.714 3 0.032513 19829 20230619_1888_Aki_TMTPro18x_K_F8 44.318 19.936 15884 13946 14737 16684 14817 14961 15972 16397 18458 19952 18321 20568 19992 18711 18209 22896 22362 22754 14686 12788 15076 16604 15409 15300 16119 16749 18674 19988 18893 20784 20283 19575 18803 22919 21358 21612 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5674200 31624 405 29713 59452 48004 48004 1 9606 Homo sapiens 0.01134567820281518 YVALVQEK Unmodified 948.52803 0.52803245 3646 P53618 COPB1 Coatomer subunit beta yes yes 0 0 0 7.5 0.5 1 1 51.114 51.192 2 0.0095739 14128 20230619_1887_Aki_TMTPro18x_K_F7 101.33 56.015 120210 109840 124420 122800 151020 157510 140230 174370 199380 133350 145230 115510 144200 99003 126110 155680 156060 131680 111270 100640 126420 123480 154500 157050 143890 175700 197410 136510 151270 117750 146240 105760 130360 154090 148850 125410 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 265070000 31625 3646 29714 59453;59454 48005 48005 1 9606 Homo sapiens 0.05170955557275647 YVANLFPYK Unmodified 1113.5859 0.58588168 3922 Q15181;V9HWB5;Q5SQT6 PPA1;HEL-S-66p Inorganic pyrophosphatase yes no 0 0 0 4 0 1 60.343 60.346 2 0.00087181 18472 20230619_1883_Aki_TMTPro18x_K_F4 127.12 0 102940 87227 90308 106800 103410 121220 115000 110600 119260 77313 78737 77056 78022 65104 116410 94502 87301 86080 95113 80013 93104 106420 106760 121220 115360 112860 119510 79983 82754 77915 81467 69100 115970 94091 83802 81853 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57547000 31626 3922 29715 59455 48006 48006 1 9606 Homo sapiens 0.03363217482683467 YVAPPSLR Unmodified 901.50215 0.50215205 2980 F8VPD4;P27708;Q53SY7;H7C2E4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 1.5 0.5 1 1 44.682 44.723 2 0.019878 12003 20230619_1881_Aki_TMTPro18x_K_F2 89.123 34.918 257710 223050 261580 272980 315610 324600 290780 312790 339250 321230 366800 368750 394270 308610 300320 421940 439480 400000 238420 204580 266240 272280 322740 324110 296240 320510 343980 325630 376130 370380 397010 326370 315370 420580 418870 380300 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 394960000 31627 2980 29716 59456;59457 48007 48007 1 9606 Homo sapiens 0.04746106105665149 YVAQAHDKPR Unmodified 1183.6098 0.60980502 1211 Q59EK6;A0A140VJY2;Q12931-2;Q12931;K0A7K7;Q9BV61;Q53G55;Q53FS6;Q8N9Z3;Q5CAQ4;I3L0K7;I3L239 TRAP1 Heat shock protein 75 kDa, mitochondrial yes no 0 0 1 5.33 3.09 1 1 1 31.182 31.218 4 0.00030634 6497 20230619_1880_Aki_TMTPro18x_K_F1 125.22 87.873 266940 156660 286710 310390 347190 336060 322850 325500 353130 274270 384770 358810 326150 298120 353650 163310 384750 305800 246550 144820 290590 300880 354760 337480 327950 331970 358880 282610 390610 358150 336140 302470 359730 174960 367280 289230 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 863200000 31628 1211 29717 59458;59459;59460 48008;48009;48010 48008 3 9606 Homo sapiens 0.02534450969073987 YVASAVFGVIGSQK Unmodified 1424.7664 0.76636524 4064 Q5TDG3;Q9UNX4;Q6PDA5 WDR3 WD repeat-containing protein 3 yes no 0 0 0 6 0 1 62.555 62.606 3 0.00094348 19290 20230619_1886_Aki_TMTPro18x_K_F6 81.904 68.134 303490 253120 323020 356590 261510 374160 367780 382820 384170 380610 422560 358680 405170 374120 359200 450220 390150 400140 280820 232550 325940 351750 279910 376880 365320 390390 391830 384130 430520 366090 412070 389250 368300 448170 373060 380550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 70045000 31629 4064 29718 59461 48011 48011 1 9606 Homo sapiens 0.07097271348879985 YVASYLLAALGGNSSPSAK Unmodified 1867.968 0.96797818 712 P05387;A0A024RCA7 RPLP2 60S acidic ribosomal protein P2 yes no 0 0 0 6.5 0.5 1 1 64.768 64.804 4 1.8176E-24 19998 20230619_1887_Aki_TMTPro18x_K_F7 200.33 186.17 245310 186430 221050 251770 197290 245490 252480 253460 254830 302570 300690 304060 323870 283660 267050 329600 313950 334840 226540 171250 226440 248760 208510 248800 251540 259730 261520 303100 307350 307920 327170 295700 275500 330600 300080 317900 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 633010000 31630 712 29719 59462;59463 48012 48012 1 9606 Homo sapiens 0.06871290523940843 YVDGDLCPDGIR Unmodified 1378.6187 0.61871473 3435 Q59EZ3;P11717;Q13660 IGF2R Cation-independent mannose-6-phosphate receptor yes no 0 0 0 2 0 1 49.821 49.879 2 1.625E-07 14386 20230619_1881_Aki_TMTPro18x_K_F2 145.25 115.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31631 3435 29720 59464 48013 48013 1 9606 Homo sapiens -0.055449882474249534 YVDGLFLPPSK Unmodified 1234.6598 0.6597749 2527 B4DLG2;O75152;Q0D2N5;E9PBY7;E9PQ61;A0A1W2PPR9;P0DQW0;B4DYM8;A0A8V8TLD8;A0A1B0GTU1;A0A024R8H9 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 0 0 0 1 0 1 61.947 61.947 3 0.066423 19185 20230619_1880_Aki_TMTPro18x_K_F1 42.041 21.088 36004 30817 38812 41675 35373 44725 39640 41317 45676 47029 44967 42959 47604 43919 50150 51989 49789 56564 33323 28296 39164 41225 37171 44896 39926 42594 46184 47107 46286 43845 48646 45700 50944 52364 47688 53652 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 22278000 31632 2527 29721 59465 48014;48015 48014 2 9606 Homo sapiens 0.05183140854364865 YVDIAIPCNNK Unmodified 1305.6387 0.63872189 205 C9J9K3;A0A8V8TMX1;A0A024R2L6;A0A0C4DG17;A0A8V8TLA4;P08865;A0A8I5KQE6;A0A8V8TMP3;A0A024R7P5 RPSA;LOC388524 40S ribosomal protein SA yes no 0 0 0 5.33 3.09 1 1 1 54.642 54.675 2;3 7.4808E-05 16304 20230619_1880_Aki_TMTPro18x_K_F1 123.63 105.49 353220 284370 311080 340350 302090 341020 352380 364210 366970 415500 365550 407390 465600 362020 355610 488950 459600 444820 326250 260840 319570 339200 315970 345350 352930 371820 373420 416760 379730 412370 466670 381750 370010 486430 438640 423020 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1000499999.9999999 31633 205 29722 59466;59467;59468 48016;48017;48018 48016 3 9606 Homo sapiens -0.001871925167961308 YVDMSVK Unmodified 840.40514 0.40514012 3597 P48047;Q53HH2 ATP5O ATP synthase subunit O, mitochondrial yes no 0 0 0 6.5 0.5 1 1 48.824 48.906 2 0.0049299 13090 20230619_1887_Aki_TMTPro18x_K_F7 144.83 81.991 359030 308550 336060 349130 402600 446100 437860 429770 570620 426290 458540 454040 495020 419540 459280 529840 575260 496710 331910 282800 344420 350620 414120 443410 443340 440010 568890 432210 477300 458770 502570 439680 474410 528620 548740 472420 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 198840000 31634 3597 29723 59469;59470 48019;48020 48020 2 9606 Homo sapiens -0.021446241656462917 YVDTPFGK Unmodified 925.45453 0.45453316 1161;3805 Q13126-2;Q13126-3;B4DUC8;A0A384ME80;Q13126;Q13126-4;A0A140CZL4;J3QSB7;Q6FHT1;Q6FHP1;A0A140CZL5;Q13126-7;Q13126-6;Q13126-5;A0A140CZL6;F8WES2;Q05DJ2;Q8WV80 MTAP S-methyl-5'-thioadenosine phosphorylase;Purine nucleoside phosphorylase no no 0 0 0 7 0 1 52.193 52.267 2 0.0020058 14602 20230619_1887_Aki_TMTPro18x_K_F7 133.6 84.01 91688 59623 72456 76183 68053 90973 82547 89911 123370 114650 120150 171800 169660 156940 86152 233960 217060 274630 84525 54775 75178 75774 71679 90797 83663 92578 123260 116330 125810 171360 167880 166430 97137 235610 206820 260200 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 67901000 31635 1161;3805 29724 59471 48021 48021 1 9606 Homo sapiens -0.011175928851798744 YVDTPFGKPSDALILGK Unmodified 1819.972 0.97200092 1161;3805 Q13126-2;Q13126-3;B4DUC8;A0A384ME80;Q13126;Q13126-4;A0A140CZL4;J3QSB7;A0A140CZL5;Q13126-7;Q13126-6;Q13126-5;A0A140CZL6;Q05DJ2;Q8WV80 MTAP S-methyl-5'-thioadenosine phosphorylase;Purine nucleoside phosphorylase no no 0 0 1 2 0 1 61.378 61.389 3 2.4507E-08 19203 20230619_1881_Aki_TMTPro18x_K_F2 121.27 85.917 333040 280260 377030 291270 287830 315090 340090 337220 316020 369350 410370 359340 308010 258970 420480 293480 263750 217990 308350 256700 377450 293970 307160 317480 339480 343790 327130 370990 412010 361830 322650 272150 416240 290660 253560 208020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 764420000 31636 1161;3805 29725 59472 48022 48022 1 9606 Homo sapiens 0.09481380017655283 YVECSALTQK Unmodified 1197.57 0.56997362 614 A0A024RAA5;P60953;B4E1U9;B7ZAY4;B4DMH5 CDC42 Cell division control protein 42 homolog yes no 0 0 0 6.67 0.471 1 2 47.508 47.594 3 0.00012837 12418 20230619_1887_Aki_TMTPro18x_K_F7 124.81 102.57 704220 626370 636990 671890 655330 718950 719820 695090 746820 805070 976110 947670 1068300 797740 810730 910270 835050 788720 651010 573750 653150 675710 681010 723200 723130 714880 768560 811900 994260 950690 1074100 833940 830810 906030 798410 750590 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2022999999.9999998 31637 614 29726 59473;59474;59475 48023;48024 48024 2 9606 Homo sapiens -0.020908568165168617 YVEEQPGHLQMGFASIR Unmodified 1960.9465 0.94653123 4136 Q6UXV4;Q68DW4 APOOL;DKFZp779P1227 MICOS complex subunit MIC27 yes no 0 0 0 6.5 0.5 1 1 52.097 52.173 3 8.4249E-10 14858 20230619_1886_Aki_TMTPro18x_K_F6 141.22 129.3 33431 23872 27522 31091 29864 34734 33458 29015 32824 34593 35780 39752 40229 36141 28413 43429 40480 38719 30843 21926 28509 30842 30952 34711 33502 30206 33611 34824 36782 39997 40378 37763 29849 43220 38603 36832 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 59867000 31638 4136 29727 59476;59477 48025 48025 1 9606 Homo sapiens 0.004495822235639935 YVELFLNSTAGASGGAYEHR Unmodified 2141.0178 0.017781914 1427 P31943;G8JLB6;A0A384MEJ3;H0YB39 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 0 0 8 0 1 60.65 60.682 3 4.5427000000000005E-45 18081 20230619_1888_Aki_TMTPro18x_K_F8 255.19 246.09 72187 65906 64102 75973 71551 61351 67233 82327 65610 81817 74338 91760 92538 70469 69044 87788 75943 110040 66735 60404 65941 75738 73481 63696 68061 82620 67411 82925 76761 91917 92687 74382 71119 89116 72831 104150 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 460440000 31639 1427 29728 59478 48026;48027 48027 2 9606 Homo sapiens -0.007086265380621626 YVELLDK Unmodified 878.47493 0.47493425 11 A0A2R8YGH5;A0A024QYT6;P61966;H7C1E4;P61966-2;A0A8V8TN74;A0A8V8TN69;F6SFB5;B8ZZZ1;Q53R44;Q96PC3-3;Q96PC3-4;Q96PC3;Q96PC3-2 AP1S1;AP1S2;AP1S3 AP-1 complex subunit sigma-1A;AP-1 complex subunit sigma-3 no no 0 0 0 5 0 1 56.523 56.585 2 0.0052601 16493 20230619_1885_Aki_TMTPro18x_K_F5 113.89 44.457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31640 11 29729 59479 48028 48028 1 9606 Homo sapiens 0.03083577774623336 YVENFGLIDGR Unmodified 1281.6354 0.63535107 2451 B4DDB9;E9PI68;Q15005;H0YE04 SPCS2 Signal peptidase complex subunit 2 yes no 0 0 0 5.5 0.5 1 1 57.1 57.159 2 2.0176E-07 16728 20230619_1885_Aki_TMTPro18x_K_F5 169.58 110.33 118930 87960 102180 113100 101080 118850 121190 120230 130970 136000 131420 136080 143750 125040 121870 150830 144220 145930 109780 80767 105250 112220 105710 119750 121340 123160 132950 136590 135380 137770 145320 130700 125700 150800 137780 138650 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 100420000 31641 2451 29730 59480;59481 48029;48030 48029 2 9606 Homo sapiens 0.00579880700843205 YVENPSQVLNCER Unmodified 1606.741 0.74095513 81 A0A024R071;O75694;E9PF10;B4DLT2;O75694-2;B3KMK3 NUP155 Nuclear pore complex protein Nup155 yes no 0 0 0 4.5 0.5 1 1 49.029 49.086 2 2.8085999999999997E-26 13522 20230619_1883_Aki_TMTPro18x_K_F4 221.55 201.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31642 81 29731 59482;59483 48031;48032 48031 2 9606 Homo sapiens -0.03814571235830044 YVEPIEDVPCGNIVGLVGVDQFLVK Unmodified 2758.4252 0.42515387 3447 P13639;Q8TA90;Q6PK56;B4DRE8 EEF2 Elongation factor 2 yes no 0 0 0 6.5 1.12 2 2 2 2 65.893 65.926 3;4 1.6211E-13 20336 20230619_1888_Aki_TMTPro18x_K_F8 129.84 116.38 29526 26361 25170 28318 23493 24293 27163 28388 27776 29989 29017 26067 35420 28456 31481 40375 36254 37372 27284 24146 25921 28400 24627 24982 27207 28762 28334 30097 29978 26762 35753 29915 32395 40183 34649 35523 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1601799999.9999998 31643 3447 29732 59484;59485;59486;59487;59488;59489;59490;59491 48033;48034;48035 48035 3 9606 Homo sapiens 0.11627829772032783 YVEQLLTLFNR Unmodified 1394.7558 0.75580056 4313 Q93034 CUL5 Cullin-5 yes yes 0 0 0 5 0 1 65.795 65.838 3 0.00012766 20505 20230619_1885_Aki_TMTPro18x_K_F5 117.45 98.667 12180 9177.7 12675 14528 12198 12386 12087 13928 15623 14510 15207 12510 13587 12490 12710 13098 14291 17077 11260 8446.9 12835 14198 12701 12719 12313 14136 15696 14574 15530 12797 13884 12923 13030 13373 13677 16167 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 25839000 31644 4313 29733 59492 48036 48036 1 9606 Homo sapiens 0.07421288694467876 YVEVSPATER Unmodified 1149.5666 0.5666028 4096 Q69YJ7;Q9NTZ6;B4DRP9;B3KQH4 DKFZp667H197;RBM12 RNA-binding protein 12 yes no 0 0 0 3 0 1 41.225 41.284 2 6.5943E-08 10118 20230619_1882_Aki_TMTPro18x_K_F3 193.38 154.42 143850 108430 130670 140660 167270 169430 166230 153240 182090 174320 188070 181090 192420 167090 154070 186920 200450 186000 132850 99565 134430 139760 170730 168810 168120 158260 184860 175300 192780 183090 194480 173850 160070 187390 191240 176730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 123990000 31645 4096 29734 59493 48037 48037 1 9606 Homo sapiens -0.002197835988681618 YVFCTAPINK Unmodified 1211.6009 0.60087982 4212 Q8IYB8;B7Z611 SUPV3L1 ATP-dependent RNA helicase SUPV3L1, mitochondrial yes no 0 0 0 3.5 0.5 1 1 54.858 54.887 3 0.031098 16317 20230619_1882_Aki_TMTPro18x_K_F3 55.064 39.174 87861 76685 85279 84281 82119 107020 103590 95792 121680 104070 98144 100790 111000 86317 103000 117710 118260 121850 81257 70263 86824 84821 86274 106210 103730 98858 121970 104680 102400 101990 112480 91231 105800 117960 113030 115670 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33822000 31646 4212 29735 59494;59495 48038 48038 1 9606 Homo sapiens 0.0035434128838005563 YVFTDISYSIPHR Unmodified 1596.7936 0.79364262 1684 Q8NBL6;G5E9W7;H7C5L9;A0A8I5KYF1;A0A8I5KSY5;A0A7P0MKV3;P82650;A0A8I5KQR7;H7C5F2;H7C5H3;A8K9Y7;A0A8I5KX02;P82650-2 MRPS22 28S ribosomal protein S22, mitochondrial yes no 0 0 0 2.5 0.5 1 1 56.834 56.859 3 0.00010011 17341 20230619_1881_Aki_TMTPro18x_K_F2 101.35 80.969 85072 71739 77021 88190 84915 108830 100250 100830 132410 78813 77041 76234 80369 69899 87284 81348 79808 85144 78617 65809 79129 87967 88177 108250 101120 102960 130690 80869 81814 77322 82278 72924 88191 81800 76469 80810 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 49097000 31647 1684 29736 59496;59497 48039;48040 48039 2 9606 Homo sapiens 0.019117548892609193 YVGEGAR Unmodified 750.36605 0.3660525 1235 C9JX88;A0A140VK70;P35998;Q75L23;P35998-2 PSMC2 26S protease regulatory subunit 7 yes no 0 0 0 3 0.816 1 1 1 31.914 31.981 2 0.057331 6309 20230619_1883_Aki_TMTPro18x_K_F4 82.913 56.049 53083 34840 62481 70541 91299 90311 71653 90947 81508 63493 95927 106060 81317 76539 91530 46359 103350 98045 49095 32200 63154 68493 91926 89784 73754 92084 82962 66921 97194 104640 83988 78343 93285 50122 98734 92595 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 56891000 31648 1235 29737 59498;59499;59500 48041;48042 48042 2 9606 Homo sapiens -0.019115884050052045 YVGELRK Unmodified 863.4865 0.48650199 632 A0A024RAQ8;Q13426;A0A024RAL0;Q13426-2;A0A024RAP0;Q13426-3 XRCC4 DNA repair protein XRCC4 yes no 0 0 1 1 0 1 40.617 40.617 3 0.051625 10370 20230619_1880_Aki_TMTPro18x_K_F1 58.167 34.644 67874 47646 58620 70714 83592 77280 68456 74409 95267 64457 66602 56762 71450 48593 65674 78677 79596 57597 62635 43830 60740 69562 84402 77593 70715 75932 94329 65502 69821 57788 72445 52015 67715 77362 75870 55010 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11225000 31649 632 29738 59501 48043 48043 1 9606 Homo sapiens 0.049298195886080975 YVGESEANIR Unmodified 1136.5462 0.54620171 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;A0A994J5C5;A0A994J855;A0A994J5Y2;A0A994J7T3 NSF Vesicle-fusing ATPase yes no 0 0 0 2.5 0.5 1 1 39.78 39.843 2 1.0689E-13 9721 20230619_1881_Aki_TMTPro18x_K_F2 230.7 181.95 201730 156500 183860 248690 230730 268590 265860 254070 316660 264290 311690 333800 306670 292050 275520 308950 354880 348370 186340 144030 189420 243600 237090 269590 267470 260940 319280 268790 319940 334270 311970 303390 285270 312330 338730 330490 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 250850000 31650 1435 29739 59502;59503 48044;48045 48044 2 9606 Homo sapiens -0.016609542587048054 YVGESEANIRK Unmodified 1264.6412 0.64116473 1435 P46459;A0A384MTI6;B7Z5J7;I3L0N3;K7EQD6;A0A994J5X9;A0A994J5X2;A0A994J5K9;B4DSK5;B7Z9U2;B4DH19;P46459-2;B4DGR3;A0A994J5C5;A0A994J855;A0A994J5Y2;A0A994J7T3 NSF Vesicle-fusing ATPase yes no 0 0 1 6 0 1 39.972 40.06 3 0.0024499 9584 20230619_1886_Aki_TMTPro18x_K_F6 80.014 57.686 43933 36556 38002 46641 52338 51031 49435 55613 55663 49550 64049 62900 64727 51388 51644 64363 64802 59679 40582 33549 39358 46325 53117 51386 50220 56321 56659 50800 65324 62900 65397 54069 53540 64175 61840 56752 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 108930000 31651 1435 29740 59504 48046 48046 1 9606 Homo sapiens 0.019429792124810774 YVGTHDFR Unmodified 993.46683 0.46682918 4475 Q9BZE2;A0A087WY59 PUS3 tRNA pseudouridine(38/39) synthase;tRNA pseudouridine synthase yes no 0 0 0 6 0 1 35.693 35.753 3 0.0076424 7900 20230619_1886_Aki_TMTPro18x_K_F6 81.642 52.915 310100 187970 288920 329660 369580 405230 330540 359410 360120 319700 408740 429840 378860 353650 316570 223630 479640 459310 286120 173420 296690 321960 376500 402740 336610 369240 366960 328610 415830 428390 384980 360620 331430 240350 457200 433830 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 81639000 31652 4475 29741 59505 48047 48047 1 9606 Homo sapiens -0.030165564221533714 YVGWTLHDR Unmodified 1145.5618 0.56179219 3977 Q68DW7;Q4LE48;Q8WVM7-2;Q8WVM7 DKFZp781D1416;STAG1 variant protein;STAG1 Cohesin subunit SA-1 yes no 0 0 0 8 0 1 45.115 45.144 3 0.00024632 11555 20230619_1888_Aki_TMTPro18x_K_F8 107.21 86.304 26862 27453 28598 27602 30823 32714 27963 30724 38762 29367 32266 29572 34975 25750 32479 33215 29885 31429 24891 25122 28929 27950 31768 32665 28705 31478 38595 29778 33509 29904 35460 27099 32932 33157 28629 29865 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 51020000 31653 3977 29742 59506 48048 48048 1 9606 Homo sapiens -0.005166229509768527 YVGWTMHDK Oxidation (M) 1151.507 0.50697943 1775 A0A8I5KVF8;Q6MZM4;Q6MZP3;Q8N3U4;Q8N3U4-2;B2R8Y6;Q6AI02;Q6MZM3;B1AMT4;A0A8I5KUG8 DKFZp686P16143;DKFZp686I05169;STAG2;DKFZp686P168;DKFZp686C21148 Cohesin subunit SA-2 yes no 0 1 0 8 0 1 42.929 42.932 3 0.026915 10669 20230619_1888_Aki_TMTPro18x_K_F8 55.064 39.173 50071 37709 46888 52310 57513 55704 56921 53047 67495 55849 61481 56471 53856 44228 60112 46727 58443 49015 46252 34652 48080 51656 58840 56021 57737 54469 67883 56331 63009 56876 55491 46170 60845 47097 55869 46565 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37412000 31654 1775 29743 59507 48049 48049 1150 1 9606 Homo sapiens -0.06271377813891377 YVIHTVGPIAYGEPSASQAAELR Unmodified 2428.2387 0.23867373 1640 A0A6Q8PH91;Q9BQ69 MACROD1 O-acetyl-ADP-ribose deacetylase MACROD1 yes no 0 0 0 8 0 1 53.861 53.932 3 9.2606E-20 15251 20230619_1888_Aki_TMTPro18x_K_F8 163.68 147.74 19032 13989 18393 18607 18317 16983 17057 17393 22550 21181 25395 32344 23570 28450 23289 25344 33915 31940 17582 12850 18730 18392 18984 17315 17452 17853 22768 21547 25889 32167 24170 29273 24282 25886 32333 30274 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 330070000 31655 1640 29744 59508 48050 48050 1 9606 Homo sapiens 0.08168393718597144 YVIYIER Unmodified 954.51747 0.51746776 3695 Q6IBH6;P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;J3KS10 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 yes no 0 0 0 7 0.816 1 1 1 51.853 51.929 2 0.051913 14416 20230619_1887_Aki_TMTPro18x_K_F7 85.359 52.519 762010 645390 756090 777930 774230 829460 856720 850250 953160 980450 890850 865230 1047900 831280 880350 1070100 932980 967180 704720 591920 768960 775610 804800 835480 862090 870550 963760 980380 923610 882700 1056200 871510 902120 1065200 892400 919600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1832899999.9999998 31656 3695 29745 59509;59510;59511 48051 48051 1 9606 Homo sapiens 0.0383897290286086 YVLCTAPR Unmodified 978.49569 0.49568646 1104 Q53HJ4;B2R7C5;A0A0S2Z4T1;P25205;P25205-2;Q8NHX6;A0A0S2Z492;J3KQ69;B4DUQ9;A0A499FHX9;B4DS46 MCM3;HCC5 DNA helicase;DNA replication licensing factor MCM3 yes no 0 0 0 1.5 0.5 1 1 43.457 43.498 2 0.0015081 11415 20230619_1881_Aki_TMTPro18x_K_F2 158.36 148.13 352230 288070 290850 282970 329470 425230 349740 349940 443690 111010 117140 93116 85238 84081 197180 102690 129890 77749 325230 263760 301180 288220 340510 417370 354100 356240 432520 125140 134230 95338 93534 87935 194280 101820 124560 74302 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 409650000 31657 1104 29746 59512;59513 48052 48052 1 9606 Homo sapiens 0.005578448826327076 YVLDPPAR Unmodified 929.49707 0.49706667 725 P26640;A0A1U9X9A1;A0A1U9X9D5;A0A1U9X9C7;A0A1U9X9C4;A0A1U9X9C8;A0A024RCN6;A0A1U9X9A3;A0A140T936;A0A140T954 VARS Valine--tRNA ligase yes no 0 0 0 5.5 0.5 1 1 44.547 44.631 2 0.036519 11363 20230619_1886_Aki_TMTPro18x_K_F6 85.359 67.035 212540 166870 186340 210800 190090 228260 217420 214390 238020 242790 251010 240830 267100 223500 230230 272990 265200 248240 196280 153160 191700 209470 198090 229130 218300 220760 241900 243800 257540 244070 270340 233720 236920 272040 253280 236100 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 514640000 31658 725 29747 59514;59515 48053 48053 1 9606 Homo sapiens 0.02949802243040267 YVLEDGPEEDRK Unmodified 1448.6783 0.6783381 1356 Q15813-2;Q15813;A0A2R8Y5Q8;A0A2R8YHI9;A0A2U3TZJ6;A0A2R8YER9;A0A2R8YFL4;A0A2R8Y809;A0A2R8Y4V6;A0A2R8Y784;A0A2R8YFM3;A0A2R8Y4P2;A0A2R8Y787;A0A2R8Y5H6;A0A2R8Y6G3;A0A2R8Y7H8 TBCE Tubulin-specific chaperone E yes no 0 0 1 2 0.816 1 1 1 43.745 43.795 3 8.7729E-06 11546 20230619_1881_Aki_TMTPro18x_K_F2 138 125.19 220920 164200 192600 235390 206530 261930 235750 226640 269330 251250 276490 278500 299560 223790 249030 286420 308100 301710 203940 150950 198520 232060 214570 261880 237030 234700 272710 253480 284320 279680 302430 236120 257570 287560 294170 286430 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 488810000 31659 1356 29748 59516;59517;59518 48054 48054 1 9606 Homo sapiens -0.028053940324070936 YVLHCQGTEEEK Unmodified 1491.6664 0.6663932 2699 B7Z7P8;P62495-2;P62495 ETF1 Eukaryotic peptide chain release factor subunit 1 yes no 0 0 0 5 1 1 1 39.305 39.393 3 8.6797E-05 9316 20230619_1883_Aki_TMTPro18x_K_F4 112.59 88.694 20942 20422 20138 21941 20759 28202 25111 23452 25559 28671 32104 26479 30411 26042 26422 37100 35645 31994 19382 18701 20553 22118 21668 27928 25082 24425 26279 28631 32515 27008 30911 27457 27505 36785 33990 30456 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 13959000 31660 2699 29749 59519;59520 48055;48056 48055 2 9606 Homo sapiens -0.05977334047202021 YVLINWVGEDVPDAR Unmodified 1744.8784 0.87843489 1396 A0A2Z6ATB6;Q16643;Q16643-3;Q16643-2;D6R9W4;D6RFI1;D6RCR4 DBN1 Drebrin yes no 0 0 0 5 0.816 1 1 1 63.412 63.459 3 7.6645E-12 19673 20230619_1886_Aki_TMTPro18x_K_F6 169.04 153.22 92886 72380 113860 99127 95390 95345 105370 98883 121410 117490 119020 126230 154480 134030 136540 133450 130340 170410 86024 66492 113530 97894 100690 96803 106210 101310 122730 118050 123840 127990 155680 138030 138810 136190 125040 161320 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 610480000 31661 1396 29750 59521;59522;59523 48057;48058;48059 48059 3 9606 Homo sapiens 0.035790806352224536 YVLKPATEGK Unmodified 1104.6179 0.61791009 4603 Q9NVI7-2;Q9NVI7;Q9NVI7-3;Q5SV16 ATAD3A ATPase family AAA domain-containing protein 3A yes no 0 0 1 2 0 1 45.058 45.14 3 0.067743 12184 20230619_1881_Aki_TMTPro18x_K_F2 54.259 35.948 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31662 4603 29751 59524 48060 48060 1 9606 Homo sapiens 0.0697858516582528 YVLSNQYRPDISPTER Unmodified 1936.9643 0.96428978 1289 P55196-5;A8MQ02;P55196;P55196-1;H0Y8U8;A0A804HJ20;A0A1P7ZIN0;G1UI22;J3KN01;P55196-2;P55196-6;P55196-3;Q5TIG5;H0Y7R8;Q96C95 MLLT4 Afadin yes no 0 0 1 8 0 1 47.511 47.569 3 3.8703999999999996E-19 12497 20230619_1888_Aki_TMTPro18x_K_F8 201.1 182.51 46917 43068 48007 46372 37380 43243 44087 45162 49916 60336 60302 61801 74488 59501 56598 72917 63676 70924 43424 39448 48504 46551 39865 44029 44283 46416 50996 60193 61996 62604 74691 62179 58351 72900 60906 67359 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 83215000 31663 1289 29752 59525 48061 48061 1 9606 Homo sapiens 0.033286207500395903 YVMTTTTLER Unmodified 1213.6013 0.60127375 3389 Q53XC0;P05198;H0YJS4;G3V4T5 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 0 0 0 7 0.816 1 1 1 47.287 47.361 2 8.1886E-14 12335 20230619_1887_Aki_TMTPro18x_K_F7 233.57 200.67 506920 431470 471320 509220 437800 566790 559020 518120 469030 621630 602260 657370 726610 559940 602900 768840 733980 718460 468580 395640 481630 508650 461060 567520 553970 535590 489010 623430 617510 662460 731430 592030 623380 765920 700890 682990 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 674490000 31664 3389 29753 59526;59527;59528 48062;48063 48063 2 9606 Homo sapiens 0.0030171621756380773 YVPGSSGSSNTLPTADPFTGAGR Unmodified 2238.0553 0.055289633 4702 Q9Y263;E5RIM3;H0YBW4 PLAA Phospholipase A-2-activating protein yes no 0 0 0 4.5 3.5 1 1 56.155 56.183 3 2.3965E-08 16226 20230619_1888_Aki_TMTPro18x_K_F8 101 85.487 68537 52926 62890 67337 53080 70059 62164 61980 76219 80262 79963 78849 88454 74507 75566 86431 83096 91619 63309 48584 64243 66847 56282 70426 62615 64377 77036 80104 82219 79964 89389 77650 77545 86923 79492 86934 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 132340000 31665 4702 29754 59529;59530 48064;48065 48065 2 9606 Homo sapiens -0.01421580063060901 YVPLADVK Unmodified 903.50657 0.50656873 668;675;4643 A0A024RBE7;P42167;G5E972;H0YJH7;A0A024RBH7;P42167-2;Q59G12;Q9P1N8 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 0 0 0 7.5 0.5 1 1 53.296 53.367 2 0.0026042 14986 20230619_1888_Aki_TMTPro18x_K_F8 124.08 55.658 576850 527280 553030 625600 603180 714310 641970 608420 743610 579300 621700 528320 576480 476610 668210 612140 650400 542440 533610 483390 565040 624780 624140 713090 648050 628250 746390 585910 641240 537420 594120 500530 676540 609300 621720 516350 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1205900000 31666 668;675;4643 29755 59531;59532 48066;48067 48067 2 9606 Homo sapiens 0.0509557052856735 YVQDFHPR Unmodified 1060.509 0.50902834 3268 O43819 SCO2 Protein SCO2 homolog, mitochondrial yes yes 0 0 0 6.5 0.5 1 1 38.117 38.187 3 0.00033222 8776 20230619_1886_Aki_TMTPro18x_K_F6 147.29 122.37 44489 29247 44470 51014 48868 55499 51451 52135 70096 57385 67353 60636 67195 61349 56817 55220 66634 64563 41087 26970 45285 49745 50524 55666 52301 53636 70191 57857 69162 61444 68123 62933 58487 56130 63646 61230 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 78187000 31667 3268 29756 59533;59534 48068 48068 1 9606 Homo sapiens -0.018805810137791923 YVQDNIQLHGQQVAR Unmodified 1767.9016 0.90162994 4654 Q9UBK8;Q9UBK8-1 MTRR Methionine synthase reductase yes no 0 0 0 7 0 1 41.311 41.382 3 1.4690000000000002E-25 9812 20230619_1887_Aki_TMTPro18x_K_F7 234.66 195.86 18041 12264 17492 14652 16732 24023 16807 17649 22375 23661 26687 25130 29541 24273 21365 29833 29731 27791 16660 11257 17790 14726 17498 23420 17126 18619 22658 23644 27280 25432 29670 25361 22377 29752 28353 26425 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20807000 31668 4654 29757 59535 48069 48069 1 9606 Homo sapiens 0.048395194725571855 YVQELAAVR Unmodified 1047.5713 0.57129425 349;3906 Q14980-2;A0A024R5M9;Q59HB8;A0A024R5G4;Q7Z757;H0YFY6;Q96HN5;K4DIE0;Q4LE64;Q14980;Q14980-4;Q14980-3 NUMA1;NUMA1 variant protein Nuclear mitotic apparatus protein 1 no no 0 0 0 6.5 0.5 1 1 49.794 49.875 2 0.010831 13536 20230619_1887_Aki_TMTPro18x_K_F7 83.647 62.1 617310 490320 570110 565530 497550 654180 631700 583800 645980 630600 595560 553820 575880 482410 589590 657930 737380 638750 570350 449620 582100 566260 526990 653000 629610 602610 655330 632520 612440 563520 589220 509370 607790 657040 703410 607250 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 579950000 31669 349;3906 29758 59536;59537 48070 48070 1 9606 Homo sapiens 0.049411453345555856 YVQLPADEVDTQLLQDAAR Unmodified 2144.075 0.074962442 4714 Q9Y333 LSM2 U6 snRNA-associated Sm-like protein LSm2 yes yes 0 0 0 4.5 0.5 1 1 62.3 62.326 3 9.1642E-40 19318 20230619_1883_Aki_TMTPro18x_K_F4 260.31 248 30750 22736 21565 29565 25281 25472 29648 29819 33890 32839 31791 30095 28167 34098 28663 37676 32322 33416 28346 20879 22774 29235 26090 26173 29763 30248 34201 32950 32550 30829 28962 35180 29392 37543 30898 31780 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 287230000 31670 4714 29759 59538;59539 48071 48071 1 9606 Homo sapiens 0.04868795947686522 YVQQLQR Unmodified 933.50321 0.50321468 2055 A8K4V4;H0Y6Y8;B1AL05;Q8N983-4;Q8N983-3;Q8N983-2;Q8N983;Q8N983-6;Q8N983-7;M0R051 MRPL43 39S ribosomal protein L43, mitochondrial yes no 0 0 0 1 0 1 38.772 38.772 2 0.007123 9528 20230619_1880_Aki_TMTPro18x_K_F1 127.66 92.85 110600 70515 120940 131680 189660 199850 138820 169300 233810 50178 57257 54686 54590 45823 88939 38796 78737 54423 102210 65098 123070 128710 190300 196080 145760 171760 225220 57609 66968 55095 57520 47217 88977 40142 75266 51614 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 46229000 31671 2055 29760 59540 48072 48072 1 9606 Homo sapiens 0.033803204745595394 YVRPFLNSISK Unmodified 1322.7347 0.73467118 3207 O00231;O00231-2;B4DTS5;J3QRY4 PSMD11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 1 6.5 0.5 1 1 52.243 52.319 3 0.00046019 14629 20230619_1887_Aki_TMTPro18x_K_F7 99.281 60.059 275490 284390 257360 244800 333380 474950 346420 313850 517390 78139 71219 60623 69213 56304 101000 72401 65990 67504 255020 259930 264200 253630 341830 458940 353260 325410 498150 92139 93956 62445 72403 59099 100060 72318 63487 64162 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222690000 31672 3207 29761 59541;59542 48073 48073 1 9606 Homo sapiens 0.08621323385591495 YVRPGGGFEPNFMLFEK Unmodified 1986.9662 0.96620404 3398 Q7L4Q3;P07203;A0A994J707;Q6NSD4;A0A994J702;A0A994J430;A0A994J4L4;A0A2R8Y6B6 GPX1 Glutathione peroxidase;Glutathione peroxidase 1 yes no 0 0 1 3 0 1 61.832 61.862 3 0.023986 19178 20230619_1882_Aki_TMTPro18x_K_F3 54.103 29.694 116690 97172 114050 107480 109360 515270 124240 82011 742140 108550 92503 103880 124400 86609 121950 108040 108250 120360 107890 89054 116470 112550 118950 479010 142590 114300 692900 110250 126650 105010 126040 91167 123220 108960 103790 114140 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 364630000 31673 3398 29762 59543 48074 48074 1 9606 Homo sapiens 0.012199582343555448 YVSGEFR Unmodified 856.40792 0.40791731 4420 Q9BRS2 RIOK1 Serine/threonine-protein kinase RIO1 yes yes 0 0 0 5 0 1 41.365 41.45 2 0.053376 10150 20230619_1885_Aki_TMTPro18x_K_F5 84.699 55.361 103770 90203 108150 102740 120410 113550 109810 117410 124680 138900 150320 151850 146050 126730 129500 159730 193650 150270 96025 82677 109610 102930 123660 114170 111870 120220 127280 139570 152830 152740 148490 133260 135660 159380 184360 142990 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 90447000 31674 4420 29763 59544 48075 48075 1 9606 Homo sapiens -0.026030327164789924 YVSLIYTNYEAGKDDYVK Unmodified 2140.0365 0.036451671 2729 C7DJS2 GSTP1 yes yes 0 0 1 8 0 1 60.859 60.891 3 7.9073E-14 18164 20230619_1888_Aki_TMTPro18x_K_F8 159.81 142.79 420140 337910 428760 379290 342820 520270 449600 375340 468050 607550 525680 595090 569920 558950 614810 662390 611910 674430 388520 309760 433440 381590 366790 511840 447740 399770 478840 601180 539290 603090 582890 582960 624520 664550 585930 640220 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1465899999.9999998 31675 2729 29764 59545 48076;48077 48076 2 9606 Homo sapiens 0.012034903130825114 YVSQYYPK Unmodified 1046.5073 0.50729701 4054 Q5SSJ5;Q5SSJ5-2;B0QZK4;Q5SWC8;Q5SSJ5-3 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 1.5 0.5 1 1 48.356 48.391 3 0.013758 13677 20230619_1881_Aki_TMTPro18x_K_F2 71.223 52.443 197230 130120 149440 181010 165910 190260 212950 205820 236480 205950 207080 235590 254640 208920 181690 249870 295410 247990 181790 119640 156260 178690 172460 191970 212610 209230 238360 209070 216050 236890 255010 218560 192660 250140 281220 235730 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 222430000 31676 4054 29765 59546;59547 48078 48078 1 9606 Homo sapiens -0.014096348223802124 YVSSLTEEISK Unmodified 1254.6343 0.63434802 193 Q53FS4;B2R774;A0A024R2A7;P49257 LMAN1 Protein ERGIC-53 yes no 0 0 0 6 0 1 56.234 56.309 3 7.1411E-05 16596 20230619_1886_Aki_TMTPro18x_K_F6 124.67 117.61 205020 207720 218720 237080 209770 273410 239940 184310 268450 226380 289110 295810 289220 222790 256570 310090 257560 312780 189960 190300 221080 237430 219710 271640 240990 195860 272450 228810 295680 294800 293430 236880 261860 310180 246800 296850 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 882320000 31677 193 29766 59548 48079 48079 1 9606 Homo sapiens 0.01721621541287277 YVTFNSK Unmodified 857.42832 0.42831841 124 Q8NCD8;A0A024R124;F8VX04;Q9H2H9 SLC38A1 Sodium-coupled neutral amino acid transporter 1 yes no 0 0 0 2 0 1 47.783 47.853 2 0.0044379 13447 20230619_1881_Aki_TMTPro18x_K_F2 121.62 74.552 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31678 124 29767 59549 48080 48080 1 9606 Homo sapiens -0.006098620566717727 YVVDSDTVQAHAAR Unmodified 1530.7427 0.74266969 4686 Q9UMS6-4;Q9UMS6-2;B9EG60;H0Y9Y3;Q9UMS6;Q9UMS6-3;B4DLE4;Q9UMS6-5 SYNPO2 Synaptopodin-2 yes no 0 0 0 4.5 0.5 1 1 38.475 38.543 3 8.219900000000001E-47 8956 20230619_1883_Aki_TMTPro18x_K_F4 271.6 250.94 48248 30382 34342 44117 47644 49791 47830 45863 50304 59799 60990 52075 60701 58309 50669 56718 60804 58999 44443 27955 36300 43468 48451 49824 48284 47495 51583 59455 61990 53443 61529 59844 52292 57142 58066 56020 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 141720000 31679 4686 29768 59550;59551 48081 48081 1 9606 Homo sapiens -0.0014719415557920001 YVVNHLGR Unmodified 956.5192 0.5191991 1508 Q9BTT5;A0A3B3ISG8;Q16795;A8K4V2;F5GY40 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 2 0 1 36.348 36.406 3 3.7286E-05 8233 20230619_1881_Aki_TMTPro18x_K_F2 155.51 105.47 73463 64018 70552 89823 117310 119070 113270 101690 118940 67878 78070 85244 79271 73886 80547 86702 93800 81411 67935 58802 72743 88902 117940 117770 114510 104220 119070 71048 82155 85405 81012 77211 82643 86619 89533 77426 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 112070000 31680 1508 29769 59552 48082 48082 1 9606 Homo sapiens 0.03920026711466562 YVVQITPAFK Unmodified 1164.6543 0.6542956 4744 Q9Y586;F1T0A2;B2R805;Q13394 MAB21L2;MAB21L1 Protein mab-21-like 2;Protein mab-21-like 1 yes no 0 0 0 4 0 1 59.275 59.277 2 0.00065587 18037 20230619_1883_Aki_TMTPro18x_K_F4 138.08 115.99 84175 71833 78698 77778 53761 57995 66243 64774 71724 92653 103700 105830 106730 100840 105670 111460 111280 133050 77814 65814 80001 77857 58156 60355 66320 66500 74096 92509 105050 106670 108830 104730 107820 113020 106570 126060 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57733000 31681 4744 29770 59553 48083 48083 1 9606 Homo sapiens 0.07855462062548213 YVVVTGITPTPLGEGK Unmodified 1629.8978 0.89777334 2973 V9GYY3;F5H2F4;P11586;V9GZ78;A0A8V8TMA4;A0A8V8TKT4;B7Z809;A0A8V8TL50;A0A8V8TKR5;A0A8V8TKS0;A0A494C1T2;A0A8V8TMA9 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 2 0 1 60.789 60.8 4 0.024474 18942 20230619_1881_Aki_TMTPro18x_K_F2 57.475 42.502 32595 29225 32271 32476 22361 32810 31860 31857 32264 37329 45498 43484 41497 39005 41546 46622 45177 46980 30155 26777 32671 32549 24324 33120 31614 32766 33368 37609 45874 43736 42502 40764 42476 46735 43202 44612 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 37328000 31682 2973 29771 59554 48084 48084 1 9606 Homo sapiens 0.10802036926111214 YVWLVYEQDRPLK Unmodified 1707.8984 0.89844205 2861 D9IAI1;P30086;A0A0K0K1J6;B4DRT4;V9HW05 HEL-S-34;PEBP1;HEL-210 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 1 1.5 0.5 1 1 60.35 60.356 3 2.9727E-08 18750 20230619_1881_Aki_TMTPro18x_K_F2 164.53 147.31 557970 393050 584620 518830 371790 663620 477040 390980 1001100 565420 404050 731350 693830 771290 788440 757130 741460 1045700 515700 361090 588280 515370 408930 653140 490630 423400 965440 568830 457850 735130 705030 793120 797370 777290 711990 989050 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 693160000 31683 2861 29772 59555;59556 48085 48085 1 9606 Homo sapiens 0.07280876365803124 YVYQPMEK Oxidation (M) 1072.4899 0.48993238 2181 B0YIW5;P48444;Q6MZV5;B0YIW6;Q6P1Q5 ARCN1;DKFZp686M09245 Coatomer subunit delta yes no 0 1 0 6.5 0.5 1 1 44.222 44.309 3 0.034605 11382 20230619_1886_Aki_TMTPro18x_K_F6 55.531 29.909 140180 113360 122740 137710 164070 164980 165140 158700 186040 151320 159820 161050 165550 137850 150870 184460 175150 168570 129480 104000 126850 137430 167100 164660 167030 162370 187220 153680 165470 162350 168100 145400 155200 183630 167300 160310 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 164270000 31684 2181 29773 59557;59558 48086;48087 48086 1352 2 9606 Homo sapiens -0.04341298419717532 YWAAHDK Unmodified 889.40825 0.40825167 120 A0A024R104;Q12860-2;Q12860 CNTN1 Contactin-1 yes no 0 0 0 7 0 1 39.239 39.303 3 0.0097901 8966 20230619_1887_Aki_TMTPro18x_K_F7 89.298 67.151 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31685 120 29774 59559 48088 48088 1 9606 Homo sapiens -0.04087612996625012 YWDAEKR Unmodified 966.45593 0.45593014 1234 Q2TU84;A0A140VK69;P17174;P17174-2;B7Z1I2 GIG18;GOT1 Aspartate aminotransferase;Aspartate aminotransferase, cytoplasmic yes no 0 0 1 6.5 0.5 1 1 41.141 41.224 3 0.015499 10036 20230619_1886_Aki_TMTPro18x_K_F6 87.435 49.876 105550 90066 101560 98978 115880 89154 121370 114900 70905 99733 130950 103700 90532 72113 137000 70606 92851 66301 97595 82530 103660 99187 118940 91628 120570 115230 77525 101570 129690 104070 95758 75356 135680 70978 89082 63116 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 82331000 31686 1234 29775 59560;59561 48089 48089 1 9606 Homo sapiens -0.028639587964335078 YWDVPPPGFEHITPMQYK Oxidation (M) 2220.035 0.035011883 2658 B5BU25;P26368-2;P26368;K7ELP8 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 0 1 0 8 0 1 59.478 59.519 3 0.013213 17536 20230619_1888_Aki_TMTPro18x_K_F8 51.888 42.841 17338 13033 15456 16439 19611 18312 20047 18377 18922 18034 16008 20434 17724 14252 19757 19875 20325 19624 16009 11964 15923 16347 20023 18385 20146 18766 19236 18311 16678 20411 18130 15203 20086 19868 19437 18644 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 9701200 31687 2658 29776 59562 48090 48090 1606 1 9606 Homo sapiens -0.026204222565866075 YWEAFLPEAK Unmodified 1252.6128 0.61282471 3862;2353 Q59GU6;Q53HL9;Q53GY8;Q13596;Q13596-2;H0YK42;Q53GG3;B3KN57;B3KML1;O60749;O60749-2 SNX1;SNX2 Sorting nexin-1;Sorting nexin-2 no no 0 0 0 7.5 0.5 1 1 63.384 63.412 3 0.021279 19288 20230619_1888_Aki_TMTPro18x_K_F8 61.353 45.814 139380 98307 123240 134480 115290 128850 148030 137770 152110 179100 158110 172460 177400 158760 166830 193610 166420 186210 128650 90347 126500 132750 121290 130910 147480 141260 155140 178530 162910 174850 179990 166030 169970 193520 159370 176870 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 363940000 31688 3862;2353 29777 59563;59564 48091 48091 1 9606 Homo sapiens -0.0033771869677821087 YWGSGLHDK Unmodified 1061.493 0.49304393 1689 Q99986;A0A7P0TA65;A0A7P0T824;A0A7P0TA16;H0YJF7;A0A7P0TBE4;A8K245;A0A7P0T9E5;A0A7P0T838;A0A7P0TB15;A0A7P0T9T1;A0A7P0T952;A0A7P0T977;A0A7P0TAS8;A0A7P0T9I1;A0A7P0TBB8;A0A7P0T8N0;A0A7P0Z445;H0YJJ9;A0A7P0TAA6;A0A7P0T925;A0A7P0Z3Z7;A0A7P0Z462;A0A7P0Z4A4;A0A7P0T9C6;A0A7P0TB08;A0A7P0T814;A0A7P0TBI6;A0A7P0T9B1;A0A7P0T832;A0A7P0Z4C8 VRK1 Serine/threonine-protein kinase VRK1 yes no 0 0 0 7.5 0.5 1 1 43.871 43.922 3 0.022658 11079 20230619_1888_Aki_TMTPro18x_K_F8 62.271 38.182 50438 42214 54437 54494 46117 60499 57246 56691 61721 61297 62381 69030 62105 55677 66604 55211 63372 62744 46676 38745 54856 54103 48921 60604 57233 58310 62653 61931 64027 69218 63619 57841 67404 55960 60661 59517 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 33043000 31689 1689 29778 59565;59566 48092 48092 1 9606 Homo sapiens -0.03524287250661473 YWLCAATGPSIK Unmodified 1365.6751 0.67510739 2907 P63244;E9KL35;J3KPE3;H0Y8W2;D6RAC2;H0YAF8;D6REE5;H0YAM7;H0Y8R5;D6RF23;H0Y9P0 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes no 0 0 0 4.5 0.957 1 2 2 1 59.957 59.992 2;3 4.0732E-09 17864 20230619_1885_Aki_TMTPro18x_K_F5 197.06 173.03 554870 484470 577950 544880 433860 571850 611270 560190 600950 636940 559430 457560 597900 423320 552330 598640 579980 462950 513460 443990 582970 545970 467300 575870 605820 575210 611460 634070 577020 471820 606280 447440 564190 591070 553840 441580 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1703499999.9999998 31690 2907 29779 59567;59568;59569;59570;59571;59572 48093;48094;48095 48095 3 9606 Homo sapiens 0.006896843799040653 YWLEEAECR Unmodified 1254.5339 0.53392246 487 B4DV79;A4D210;A0A024R821;P55884;P55884-2;Q96G38;B4DXN6;Q86UM1;C9JZG1;C9JQN7 EIF3B;EIF3S9 Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 2.5 0.5 1 1 53.499 53.527 2 3.3123E-08 15951 20230619_1881_Aki_TMTPro18x_K_F2 205.58 184.08 98738 73816 95400 102340 73471 100410 105680 108350 113650 138000 118650 134450 153590 127920 111720 159250 127450 150310 91225 67833 96932 100980 79066 101790 104970 110930 115690 137720 123100 136390 153640 133830 115480 158880 121950 142770 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 145750000 31691 487 29780 59573;59574 48096;48097 48096 2 9606 Homo sapiens -0.08316313993373114 YWPDEYALK Unmodified 1183.555 0.55497548 1318 Q06124-1;Q06124;A0A8I5KW48;A0A3G1LBG2;A0A1W2PPU4;A0A8I5QJ58;Q06124-3;A0A8I5KRZ3;A0A8I5QL30;A0A8I5KVS6;A0A0U1RRI0 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 0 0 0 6.5 0.5 1 1 59.692 59.745 2 4.8608E-05 17683 20230619_1887_Aki_TMTPro18x_K_F7 163.99 133.42 74012 61654 74102 75479 59789 65148 73892 75069 71430 95330 93321 90869 94632 93187 90100 97880 97993 106370 68445 56558 75056 74983 63583 66906 73670 76554 73883 95074 94772 92524 96405 96265 92181 98746 93740 100910 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 38579000 31692 1318 29781 59575;59576 48098;48099 48099 2 9606 Homo sapiens -0.029459806222121188 YWPQEAGEYAVHVLCNSEDIR Unmodified 2535.1489 0.14887244 3484 P21333;P21333-2;Q60FE5;Q60FE6;A6NDY9;A0A7P0NMY4 FLNA Filamin-A yes no 0 0 0 6 0 1 62.615 62.666 3 5.3839E-12 19312 20230619_1886_Aki_TMTPro18x_K_F6 139.69 10.184 44447 39161 39125 46806 30722 30487 39299 40519 37580 43302 46362 39076 46951 41622 39118 54609 47302 45381 41078 35908 40099 46439 32780 32320 39105 40798 38749 43465 47126 40006 47542 43520 40454 54107 45166 43208 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 114150000 31693 3484 29782 59577 48100 48100 1 9606 Homo sapiens -0.057296039522952924 YWQQVIDMNDYQR Unmodified 1757.7832 0.78315429 3284 O60701;O60701-3;O60701-2 UGDH UDP-glucose 6-dehydrogenase yes no 0 0 0 7 0 1 61.591 61.63 2 3.4374E-12 18505 20230619_1887_Aki_TMTPro18x_K_F7 163.9 149.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31694 3284 29783 59578 48101 48101 1 9606 Homo sapiens -0.06542595827477271 YWTLTATGGVQSTASSK Unmodified 1756.8632 0.86317875 1426 A0A384MEG1;Q16658;B3KTA3;B3KTM9;C9JFC0;A0A0A0MSB2;C9JPH9 FSCN1 Fascin yes no 0 0 0 4.38 1.41 1 6 1 65.256 65.276 3 6.1581E-19 16812 20230619_1883_Aki_TMTPro18x_K_F4 189.37 176.53 696950 608190 698580 679190 578960 632200 760800 738700 756370 915410 857350 843770 869930 788910 911830 770290 920410 990040 644730 557340 707620 679960 615230 645570 756700 752040 775580 913070 875650 857450 889680 814920 926150 787170 881040 937760 10 10 10 10 9 10 10 10 10 10 10 10 10 10 10 10 10 10 2444500000 31695 1426 29784 59579;59580;59581;59582;59583;59584;59585;59586 48102;48103;48104;48105;48106;48107;48108;48109;48110;48111 48103 10 9606 Homo sapiens 0.015021690473759008 YYAEVETR Unmodified 1029.4767 0.47672516 63 B3KPN7;A0A024QZT2;Q96KP1 EXOC2 Exocyst complex component 2 yes no 0 0 0 2 0 1 41.055 41.131 2 0.05169 10318 20230619_1881_Aki_TMTPro18x_K_F2 69.954 48.447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31696 63 29785 59587 48112 48112 1 9606 Homo sapiens -0.036834132074318404 YYAFPQMITPLVTK Unmodified 1670.8742 0.87420113 3889 V9HWB2;Q14353;A0A1W2PR36 HEL-S-20;GAMT Guanidinoacetate N-methyltransferase yes no 0 0 0 6 0 1 63.961 64.007 3 0.0012266 19941 20230619_1886_Aki_TMTPro18x_K_F6 77.078 64.311 39424 26135 31132 37526 33010 33271 37188 37291 29487 34170 43645 52676 48384 42147 39094 58825 49732 61448 36348 24039 32377 36894 34222 34057 37036 37759 31052 35234 44382 52300 48801 44687 40619 58925 47562 58292 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 171710000 31697 3889 29786 59588 48113 48113 1 9606 Homo sapiens 0.06559899887929532 YYAGWADK Unmodified 972.43413 0.43413207 1475 P05091;A0A384NPN7;Q53FB6;P05091-2;B4YAH7;F8VP50;O94788;B4DH89;H0YMG7;O94788-3;O94788-2;O94788-4;H0YKL3 ALDH2;ALDH1A2 Aldehyde dehydrogenase, mitochondrial;Retinal dehydrogenase 2 yes no 0 0 0 8 0 1 51.631 51.708 2 0.019174 14248 20230619_1888_Aki_TMTPro18x_K_F8 89.752 57.817 260260 250780 276870 226010 232490 260150 298760 273330 263150 352050 342960 340700 395180 324520 300930 415480 438680 415310 241050 229330 278930 231110 246590 260990 296410 280410 273700 351050 350340 345940 397220 340180 315880 415680 418230 394550 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 164550000 31698 1475 29787 59589 48114 48114 1 9606 Homo sapiens -0.053187635450058224 YYCQNFAPNFK Unmodified 1450.634 0.63397086 441 A0A024R7E0;Q96RE7 BTBD14B;NACC1 Nucleus accumbens-associated protein 1 yes no 0 0 0 3 0 1 55.839 55.88 3 0.00032546 16731 20230619_1882_Aki_TMTPro18x_K_F3 100.48 79.226 48582 42439 45187 51966 40644 49813 54507 46487 55838 50283 49117 46136 51210 41592 53789 51656 49736 50263 44916 38925 46170 51663 42984 50452 54176 47861 56527 50504 50802 46884 52305 43599 54416 51680 47630 47753 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 26579000 31699 441 29788 59590 48115 48115 1 9606 Homo sapiens -0.07332076659577069 YYDAIACLK Unmodified 1115.5321 0.53213155 2670 B7SBB1;O00170;D0EKE4;A5JGZ4;A0A804HKH9;D0EKE6;D5LTB3;C8CK04;C8CHN4;C0JXB8;D0EKE5;C0JXB9;C8CK05;A0A804HJ38;A0A804HIX8;D2CVN5;E9PMH2;V9GYQ3;A0A804HKK3;A0A804HKL7;A0A804HJ46 AIP AH receptor-interacting protein yes no 0 0 0 1 0 1 58.698 58.698 3 0.0033805 18004 20230619_1880_Aki_TMTPro18x_K_F1 81.594 62.814 22071 16658 22156 23284 23011 25193 24900 24511 27963 25346 25901 29157 33602 26135 29841 33287 32849 38101 20399 15309 22520 22990 23884 25310 25093 25115 28237 25692 27034 29329 33859 27455 30596 33591 31437 36118 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 109630000 31700 2670 29789 59591 48116 48116 1 9606 Homo sapiens -0.021013230113339887 YYDDTYPSVK Unmodified 1249.5503 0.55028404 650 Q53FU3;A0A024RB72;F8VVA7;P61923;F8VXB1;F8W156;F8VYZ4;P61923-5;P61923-4;F8VUC5;F8VXR1 COPZ1 Coatomer subunit zeta-1 yes no 0 0 0 4.5 0.5 1 1 49.788 49.844 2 4.1414E-07 13681 20230619_1885_Aki_TMTPro18x_K_F5 211.52 196.38 143150 105140 134100 136810 146830 154180 152000 149320 151340 197650 194260 193100 206580 174490 177780 231940 227870 221670 132210 96561 137170 135790 151570 154500 152990 154150 156170 196940 197820 195650 209100 183640 184350 231410 217490 210680 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 166170000 31701 650 29790 59592;59593 48117;48118 48118 2 9606 Homo sapiens -0.06450909555633189 YYDILKK Unmodified 941.52222 0.52221879 3246 O43143;B4E0S6 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 1 2 0 1 52.052 52.091 3 0.019966 15355 20230619_1881_Aki_TMTPro18x_K_F2 81.278 42.922 175600 126470 142500 175090 162050 196130 154770 174160 193630 227480 250730 246330 258420 208290 165600 280860 258360 213950 162000 116240 148000 173000 166870 196150 157790 180820 197480 227560 254700 248020 259070 219860 175770 277000 246000 204080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 76006000 31702 3246 29791 59594 48119 48119 1 9606 Homo sapiens 0.049118570456244015 YYDSRPGGYGYGYGR Unmodified 1729.7485 0.74848335 15 A0A024QYX3;P98179 RBM3 RNA-binding protein 3 yes no 0 0 1 1.5 0.5 1 1 42.053 42.092 3 1.6128E-18 11021 20230619_1880_Aki_TMTPro18x_K_F1 195.1 188.12 334350 270570 291610 365660 418430 394550 477980 465880 456780 514890 420970 425870 518890 453530 416740 532150 537460 502380 308810 248490 302180 361780 425550 398510 477580 472180 465750 514880 437930 437310 521850 471100 432840 531520 512830 477600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 696100000 31703 15 29792 59595;59596 48120;48121 48120 2 9606 Homo sapiens -0.08720095643911918 YYETHNVK Unmodified 1052.4927 0.49270958 3869 Q5T0F3;Q13823 GNL2 Nucleolar GTP-binding protein 2 yes no 0 0 0 6 0 1 36.468 36.528 3 0.00016442 8131 20230619_1886_Aki_TMTPro18x_K_F6 149.94 109.5 57655 40947 60252 56489 71611 69139 65234 63524 74575 65667 77521 65303 84231 71182 70288 51157 93494 74642 53288 37634 61123 55936 73235 68839 66444 65337 75545 66280 79597 66513 85101 72225 72877 53121 89099 70715 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 89795000 31704 3869 29793 59597 48122 48122 1 9606 Homo sapiens -0.031437069705361864 YYFEGIK Unmodified 918.44872 0.4487195 3356 O95433;G3V438;H0YJU2 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 6.2 2.64 1 2 2 55.674 55.723 2;3 0.01296 15981 20230619_1888_Aki_TMTPro18x_K_F8 119.89 62.328 692300 579380 657770 714420 638060 783150 784280 780660 792580 814410 781930 733870 925760 679110 778040 931220 845910 827680 639970 531520 671270 711330 668760 786440 782630 798530 806940 818710 808740 747310 932540 716110 798340 925480 808580 787300 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 556720000 31705 3356 29794 59598;59599;59600;59601;59602 48123;48124;48125 48125 3 9606 Homo sapiens -0.013766913968538574 YYGAQTVR Unmodified 956.47158 0.4715802 3406 P07954-2;A0A804HI24;A0A0S2Z4C3;P07954;A0A804HKE6;A0A0S2Z3S9;A0A0S2Z3W2;A0A0S2Z3X6;A0A0S2Z4H0 FH Fumarate hydratase, mitochondrial yes no 0 0 0 5.33 3.09 1 1 1 36.9 36.917 2 0.0041912 8037 20230619_1887_Aki_TMTPro18x_K_F7 117.18 92.978 254790 196490 226930 226270 296150 293800 302730 280760 342940 236250 260550 219920 242400 202250 266290 273630 297370 224700 235300 180200 233870 227030 302130 291770 305920 286520 343460 240870 270220 223720 249170 212940 272090 271090 283720 214210 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 490240000 31706 3406 29795 59603;59604;59605 48126;48127;48128 48127 3 9606 Homo sapiens -0.008396722793804656 YYGESLPFGDNSFK Unmodified 1622.7253 0.72528829 347;1713 B7Z7Q6;E9PNF7;A0A024R5L0;P42785;P42785-2;E9PQB5;E9PL85;E9PKN6;E9PLY4;E9PL49;E9PNJ1;A0A7P0TB23 PRCP Lysosomal Pro-X carboxypeptidase no no 0 0 0 7 0 1 61.489 61.528 3 3.283E-05 18469 20230619_1887_Aki_TMTPro18x_K_F7 107.37 95.206 76804 42193 65696 71412 76889 90388 115380 100770 107610 85560 79224 92311 99077 76896 93103 88389 91231 116160 70788 38927 67914 69936 80022 90120 113750 101830 108880 87504 83617 92843 100160 80521 94653 90198 87479 109950 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 445080000 31707 347;1713 29796 59606 48129 48129 1 9606 Homo sapiens -0.06116534481225244 YYGGGSEGGR Unmodified 1001.4203 0.42027292 1455 Q6NTA2;A0A384N6C7;P14866;B2R959;B4DPK8 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 3 0.816 1 1 1 32.573 32.635 2 2.6026E-09 6588 20230619_1882_Aki_TMTPro18x_K_F3 196.95 185.46 129990 65494 175490 181460 252620 269700 198270 247280 180210 163830 279640 344230 260830 261600 271940 90602 321980 294860 120260 60982 175660 174630 254570 265240 202750 251820 188420 175440 281920 337960 267560 263520 278030 105890 307400 277990 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 736960000 31708 1455 29797 59607;59608;59609 48130;48131;48132 48131 3 9606 Homo sapiens -0.08038041044073907 YYGLQILENVIK Unmodified 1451.8024 0.8024164 3228 O14980;A0A7I2V461;A0A7I2V2Y6;A0A7I2YQV4;A0A7I2V2H0;A0A7I2V3P3;A0A7I2V3W6;A0A7I2V2S3;A0A7I2V3N0;A0A7I2V4A3;A0A7I2YQX3;C9JKM9;C9J673;A0A7I2V2C5;A0A7I2V3J1;A0A7I2YQP1 XPO1 Exportin-1 yes no 0 0 0 2.5 0.5 1 1 65.048 65.069 3 0.0022288 20616 20230619_1882_Aki_TMTPro18x_K_F3 75.045 55.467 13576 9460.9 13360 15396 11467 14572 13711 14113 13179 14502 17071 13216 14889 14517 14140 16228 17760 19698 12540 8713.6 13575 15039 12132 14775 13688 14463 13610 14595 17211 13539 15244 15023 14603 16467 16971 18665 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 277140000 31709 3228 29798 59610;59611 48133 48133 1 9606 Homo sapiens 0.09458728525760307 YYGNVRPSGR Unmodified 1167.5785 0.57850489 1524 Q14643;Q14643-7;A0A3B3ITU8;Q14643-5;Q14643-6;Q14643-8;Q14643-2;Q14643-3;A0A3B3IU04;Q14643-4;A0A3F2YNW8;A0A3B3IRP0;A0A3B3ITQ1;A0A3B3IU05;A0A3B3IU13;A0A3B3ISE3;Q59H91;A0A3B3IS59 ITPR1 Inositol 1,4,5-trisphosphate receptor type 1 yes no 0 0 1 4.5 0.5 1 1 32.64 32.71 3 0.069932 6609 20230619_1883_Aki_TMTPro18x_K_F4 46.033 32.454 38166 26223 38953 39036 58590 59917 45175 42837 56204 44960 46541 45398 49197 36776 49213 42765 54617 43600 35262 24126 39792 38613 58923 58607 46654 44992 56245 45377 48322 45770 50102 38562 50298 42951 52128 41443 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 20734000 31710 1524 29799 59612;59613 48134 48134 1 9606 Homo sapiens 0.0014187793501605483 YYHAQCNFFQDGLK Unmodified 1789.7882 0.78823967 935 A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBF7 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 1 0 1 53.06 53.06 3 0.0065527 15607 20230619_1880_Aki_TMTPro18x_K_F1 66.393 54.953 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31711 935 29800 59614 48135 48135 1 9606 Homo sapiens -0.07506291964864431 YYHQVTR Unmodified 965.47191 0.47191456 328 A0A024R5A7;A8K0D4;Q9Y6J9 TAF6L TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L yes no 0 0 0 7.5 0.5 1 1 29.631 29.692 3 0.0036238 5579 20230619_1888_Aki_TMTPro18x_K_F8 114.78 86.676 21901 9127.2 23813 24826 38553 34221 32139 37218 42700 24451 32949 33759 26048 30160 27355 18032 35806 29261 20204 8505.6 24251 23878 38651 33942 33097 37449 42444 25707 33967 33710 26933 30562 28204 18984 34132 27698 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 12452000 31712 328 29801 59615;59616 48136 48136 1 9606 Homo sapiens -0.01220252559517121 YYIAASYVK Unmodified 1076.5542 0.5542472 1681 A0A7I2YQQ3;A8K335;Q92820;A0A7I2V5X9;B4DVI2;A0A7I2V5P2 GGH Gamma-glutamyl hydrolase yes no 0 0 0 3 0 1 54.873 54.919 2 1.0185E-05 16322 20230619_1882_Aki_TMTPro18x_K_F3 173.23 129.1 71354 65444 62410 56105 99185 191330 85384 88258 204280 27490 29407 37793 33888 30728 42174 32327 39646 40731 65961 59835 64768 59153 100690 180620 90358 95549 193810 31853 38627 37687 34947 32011 42543 32963 37965 38593 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 18098000 31713 1681 29802 59617 48137 48137 1 9606 Homo sapiens 0.01903224728744135 YYIDADLLR Unmodified 1140.5815 0.58152458 1804 B4DRV5;A0A8Q3WLP2;Q53FD7;Q53H29;A0A8Q3WKJ4;Q7Z3B4-3;Q7Z3B4;A0A8Z5F6C8;Q7Z3B4-2 NUP54 Nucleoporin p54 yes no 0 0 0 6 0 1 59.256 59.32 2 0.00077075 17919 20230619_1886_Aki_TMTPro18x_K_F6 123.98 83.916 51897 44115 45127 56714 49878 60945 51746 53130 63226 51374 48491 48264 54084 47461 52564 60821 57692 53709 47947 40485 46551 56268 51564 61108 52417 54778 63161 51956 50698 49138 54974 49677 53804 60485 55122 51103 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 55481000 31714 1804 29803 59618 48138 48138 1 9606 Homo sapiens 0.016857082691331016 YYITIIDAPGHR Unmodified 1417.7354 0.73539946 1378 Q05639;A0A2U3TZH3;Q59GP5;A0A2R8Y488;A0A2R8Y660;A0A2R8YDN5 EEF1A2 Elongation factor 1-alpha 2 yes no 0 0 0 4.5 3.04 1 1 1 1 52.25 52.298 3 3.8712999999999997E-32 15264 20230619_1880_Aki_TMTPro18x_K_F1 237.68 216.73 326520 289540 296110 307580 227860 248540 287880 304070 307410 345460 364550 370120 387670 304030 339450 408780 382330 389240 301850 265200 302340 308610 243730 257260 287630 307970 314490 347460 372370 372470 392460 321410 348780 407800 365450 369890 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4488000000 31715 1378 29804 59619;59620;59621;59622 48139;48140;48141;48142 48140 4 9606 Homo sapiens 0.043241180346285546 YYLCGFCPAELFTNTR Unmodified 2010.8968 0.89680384 3127 Q86Y74;J3KPP4;O95232;Q6PKC2;A8K3C5;D6RDI2;C9JL41;O95232-2;H7C5U7 CROP;LUC7L3 Luc7-like protein 3 yes no 0 0 0 3.5 0.5 1 1 64.323 64.343 3 2.9856E-15 20138 20230619_1883_Aki_TMTPro18x_K_F4 191.19 181.77 30933 26072 29635 30508 24824 28569 29507 34883 29791 37471 35829 35141 41526 34275 29763 48074 45122 41319 28598 23905 30144 30437 26298 29183 29522 35252 30616 37634 36710 35780 41649 36112 31420 47652 42998 39330 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 118110000 31716 3127 29805 59623;59624 48143 48143 1 9606 Homo sapiens -0.06820868776731004 YYLDSLDR Unmodified 1043.4924 0.49237523 1253 A0A142CHG9;P09471-2;P09471;Q8N6I9;B3KP89;H3BTM2 GNAO1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 4.5 0.5 1 1 51.566 51.618 2 2.4657E-07 14700 20230619_1883_Aki_TMTPro18x_K_F4 214.11 93.467 1308100 1186600 1289100 1363300 1007200 1206100 1173000 1206300 1262600 1452300 1678900 1919500 1609800 1584800 1781500 1700000 1987600 2042600 1210300 1087500 1307200 1360700 1073800 1231700 1177100 1239600 1298200 1468100 1702200 1915200 1654800 1651100 1819400 1726000 1900100 1936200 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 644920000 31717 1253 29806 59625;59626 48144;48145;48146 48145 3 9606 Homo sapiens -0.027631266903881624 YYLHDDR Unmodified 980.43519 0.4351947 1525 A0A3B3ITZ9;Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 yes no 0 0 0 2.5 0.5 1 1 34.663 34.724 3 0.023828 7474 20230619_1882_Aki_TMTPro18x_K_F3 67.981 53.205 27363 21132 31004 33210 37999 41145 40071 36538 42697 42766 42821 51273 48432 38825 40740 36898 49941 56136 25320 19446 31316 32628 38950 40884 40352 37821 43373 43142 44230 51180 48876 40397 42047 38199 47737 53092 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30830000 31718 1525 29807 59627;59628 48147;48148 48148 2 9606 Homo sapiens -0.05580549176090699 YYMNQVEETR Oxidation (M) 1347.5765 0.57651556 3637 Q9BW75;Q96CV8;P52888;K7EP46;B4DU96 THOP1 Thimet oligopeptidase yes no 0 1 0 2.5 0.5 1 1 38.196 38.254 2 0.043236 9062 20230619_1881_Aki_TMTPro18x_K_F2 64.711 50.038 21854 15755 20325 23990 26948 27279 21623 26375 28737 29655 27570 26954 28840 21359 25315 31319 30253 27051 20182 14496 20889 23579 27323 27311 22344 27076 28852 29705 28388 27302 29210 22755 26108 31055 28876 25750 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 31267000 31719 3637 29808 59629;59630 48149;48150 48149 2330 2 9606 Homo sapiens -0.08336963655779073 YYMNQVEETR Unmodified 1331.5816 0.58160094 3637 Q9BW75;Q96CV8;P52888;K7EP46;B4DU96 THOP1 Thimet oligopeptidase yes no 0 0 0 3 0 1 44.574 44.647 2 2.7743E-06 11683 20230619_1882_Aki_TMTPro18x_K_F3 169.41 150.16 60424 45065 52542 62108 51615 78030 63821 60304 69533 77998 77211 72704 85599 70320 70901 77394 83035 76859 55781 41410 54104 61486 54201 77219 63818 63307 70867 77730 79185 73966 86383 73011 73056 77621 79287 73030 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 57358000 31720 3637 29808 59631 48151 48151 1 9606 Homo sapiens -0.07092659793170242 YYNSDVHR Unmodified 1052.4676 0.46755746 3479 P19623;K7EL89 SRM Spermidine synthase yes no 0 0 0 4 0.816 1 1 1 30.713 30.788 3 4.6131E-05 5829 20230619_1883_Aki_TMTPro18x_K_F4 171.53 140.96 82951 58701 86624 86665 103360 93331 80847 91683 98468 72648 82412 102820 81258 72463 84664 50536 110250 78513 76666 53995 87896 85294 105290 93855 83423 93267 98629 75373 85415 101840 83189 74590 87231 52836 105020 74392 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 95060000 31721 3479 29809 59632;59633;59634 48152;48153;48154 48153 3 9606 Homo sapiens -0.05657761773113634 YYPASPWVDNSR Unmodified 1453.6626 0.66262845 1875 A0A994J595;P54289-4;P54289-5;P54289;Q9UIU0;P54289-3;P54289-2;A0A994J5M8;E7ERK3;Q9UDL7 CACNA2D1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 8 0 1 52.903 52.978 2 1.7593E-06 14829 20230619_1888_Aki_TMTPro18x_K_F8 182.46 161.59 58149 53279 60353 50471 38621 41411 60906 55044 58245 54929 71102 61971 65337 55969 63913 56542 69178 71465 53826 48749 60741 51170 42393 42921 60065 55319 59936 55722 72041 62425 66793 57983 65265 57672 66154 67712 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 40032000 31722 1875 29810 59635 48155 48155 1 9606 Homo sapiens -0.04605635758753124 YYPTEDVPR Unmodified 1138.5295 0.52948901 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VZ45;U3KQR5;F8VR69 RPL6 60S ribosomal protein L6 yes no 0 0 0 3 0.816 1 1 1 44.484 44.551 2 7.3136E-06 11597 20230619_1882_Aki_TMTPro18x_K_F3 179.21 160.43 914220 818370 966470 997000 1068400 1094200 1183900 1071800 1070500 1178400 1233600 1129600 1213800 1019200 1221900 1197200 1166000 1105400 846250 750500 979180 993600 1103400 1098900 1183500 1099600 1104100 1183500 1256800 1145600 1239500 1064400 1239100 1195300 1115800 1051100 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 1461199999.9999998 31723 680 29811 59636;59637;59638 48156;48157;48158;48159 48157 4 9606 Homo sapiens -0.03423455144638865 YYPTEDVPRK Unmodified 1266.6245 0.62445203 680 Q8TBK5;Q8N5Z7;A0A024RBK3;Q9HBB3;Q02878;B2R4K7;F8VZ45;U3KQR5;F8VR69 RPL6 60S ribosomal protein L6 yes no 0 0 1 6 0.816 1 1 1 43.198 43.282 3 2.5963E-07 10921 20230619_1886_Aki_TMTPro18x_K_F6 174.86 163.92 2063500 1556400 1619600 1976600 1727400 2190000 1925400 2060700 2212700 2579800 2464600 2321100 3065200 2366800 2028600 3265600 2932800 2766000 1903700 1428800 1686300 1963900 1794800 2194600 1939400 2127400 2250700 2571300 2540800 2371600 3059100 2488100 2137800 3235400 2796200 2633100 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3085599999.9999995 31724 680 29812 59639;59640;59641 48160;48161;48162 48161 3 9606 Homo sapiens 0.0018047832654701779 YYQADQLVQR Unmodified 1282.6306 0.63060004 1693 Q03001;F8W9J4;A0A7P0T890;Q03001-14;Q5T0V7;F6QMI7;E9PHM6;E7ETB9;Q03001-8;A0A494C1D7;Q03001-9;B4DSS9;Q03001-3;Q6P0N6;B4DGY0;Q03001-13 DST Dystonin yes no 0 0 0 7 0 1 46.029 46.116 3 0.062234 11783 20230619_1887_Aki_TMTPro18x_K_F7 43.297 21.251 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31725 1693 29813 59642 48163 48163 1 9606 Homo sapiens 0.0005899655807297677 YYSFFDLNPK Unmodified 1292.6077 0.60773933 385 Q96AC1-3;A0A024R687;Q96AC1;H0YJ34;Q96AC1-2;A8K6S3;A0A0U1RRM8;B2RAX1;Q54A15;Q9BQL6-2;A0A8V8TN73;Q9BQL6;Q9BQL6-4;Q49AC8 FERMT2;PLEKHC1;DTGCU2;FERMT1 Fermitin family homolog 2;Fermitin family homolog 1 yes no 0 0 0 2 0 1 62.969 62.978 3 0.00047315 19974 20230619_1881_Aki_TMTPro18x_K_F2 90.108 68.235 134050 118750 133920 143200 107210 171230 147590 149610 149680 201940 171410 167880 221780 142180 168000 205660 172450 196660 124010 108900 135780 142970 114950 170390 146600 155680 153540 200150 177000 171090 221850 151110 172240 205020 165130 186790 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 344500000 31726 385 29814 59643 48164 48164 1 9606 Homo sapiens -0.026860225593736686 YYSSENTRPK Unmodified 1243.5833 0.5833155 1377 C9JMN1;A0A2S1ZR87;A0A2S1ZR79;Q96SB8;Q96SB8-2 SMC6 Structural maintenance of chromosomes protein 6 yes no 0 0 1 7.5 0.5 1 1 34.818 34.852 3 9.793E-06 7416 20230619_1888_Aki_TMTPro18x_K_F8 143.28 121.29 87607 52183 93769 86285 106630 114160 96584 95155 112910 122010 141370 139610 142010 120880 119780 85440 159400 144290 80917 48107 94878 84659 109440 112850 98519 99231 115280 122410 143690 140160 143870 123530 124170 89853 152020 136480 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 29733000 31727 1377 29815 59644;59645 48165;48166 48166 2 9606 Homo sapiens -0.02873282712926084 YYSYGLEK Unmodified 1021.4757 0.47566253 4130 Q6PKG0;Q6PKG0-3;A0A8I5KWU3;A0A8I5KSP1 LARP1 La-related protein 1 yes no 0 0 0 7 0 1 50.805 50.882 3 0.001462 13987 20230619_1887_Aki_TMTPro18x_K_F7 114.28 52.502 53779 44107 55396 56965 55594 53405 58676 57760 67967 51380 48974 43141 47359 39798 56841 52682 55476 44165 49741 40485 56139 56434 57752 54393 59271 58548 67920 52044 51058 44093 48845 41842 57530 52276 53014 42080 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31474000 31728 4130 29816 59646 48167 48167 1 9606 Homo sapiens -0.03421627576312858 YYTEFPTVLDITAEDPSK Unmodified 2087.9939 0.99391815 3226 O14929;O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit yes no 0 0 0 5 0.816 1 1 1 63.867 63.9 3 2.1539E-09 19729 20230619_1885_Aki_TMTPro18x_K_F5 124.25 110.98 58813 41881 49890 61641 46187 57307 60672 64173 61403 71980 64493 68860 90396 70687 57997 78909 70382 68753 54270 38521 51449 60544 48716 58398 60373 65289 62721 72208 67160 70099 89854 73308 60341 78545 67210 65416 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 491430000 31729 3226 29817 59647;59648;59649 48168;48169 48169 2 9606 Homo sapiens -0.00655904815039321 YYTGNYDQYVK Unmodified 1412.6248 0.62484596 902 A0A090N7X1;A0A090N7Y2;Q9UG63;Q9UG63-2 ABCF2 ATP-binding cassette sub-family F member 2 yes no 0 0 0 7.5 0.5 1 1 51.802 51.877 2 2.3351E-05 14434 20230619_1887_Aki_TMTPro18x_K_F7 164.64 90.166 94394 67172 82048 94885 81461 98268 97876 88138 92653 120680 105880 108930 123010 100810 98482 128280 115920 115240 87118 61753 84458 93545 85164 98843 97575 91646 95381 119820 108770 110820 123820 105720 101700 127660 110740 109600 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 77798000 31730 902 29818 59650;59651 48170;48171 48170 2 9606 Homo sapiens -0.06496146744257203 YYTLEEIQK Unmodified 1185.5918 0.59175492 1420 Q59F44;A0A384ME44;P00167-2;P00167;P00167-3 CYB5A Cytochrome b5 yes no 0 0 0 5.67 0.471 1 2 55.157 55.233 2;3 1.6005E-10 15948 20230619_1885_Aki_TMTPro18x_K_F5 182.69 132.88 38744 31440 37419 36267 32399 36687 43198 39920 38107 46479 50882 48249 46903 45906 48021 46863 43594 58058 35813 28828 38044 36256 34327 37147 42786 40744 39638 46656 51426 48824 48072 47475 48568 47710 41853 54972 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 41938000 31731 1420 29819 59652;59653;59654 48172;48173;48174 48172 3 9606 Homo sapiens 0.006382712037066085 YYTSASGDEMVSLK Unmodified 1549.697 0.69702463 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 0 0 5.2 1.17 2 1 1 1 54.595 54.651 2;3 5.7474E-20 16083 20230619_1883_Aki_TMTPro18x_K_F4 204.17 180.8 324600 261140 298190 322740 273170 356980 352180 320020 370130 405250 374430 390740 454950 360170 349100 464410 406880 420700 299920 239600 304980 321290 288300 357420 351040 331860 376520 404550 387540 396300 456580 378130 360680 462230 388840 400000 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 9926200000 31732 3177 29820 59655;59656;59657;59658;59659 48175;48176;48177;48178;48179 48176 5 9606 Homo sapiens -0.05583600452837345 YYTSASGDEMVSLK Oxidation (M) 1565.6919 0.69193925 3177 K9JA46;P07900;P07900-2;Q2VPJ6;Q8TBA7;O75322;Q86U12;Q96HX7 EL52;HSP90AA1 Heat shock protein HSP 90-alpha yes no 0 1 0 5.14 0.833 2 2 3 50.145 50.21 2;3 8.5023E-07 13726 20230619_1885_Aki_TMTPro18x_K_F5 123.02 102.59 502520 424620 460180 493980 516550 531790 497920 520000 582450 615480 636560 596800 700390 556500 535530 762170 651230 684120 464430 389310 471950 493760 531490 534830 505940 534510 591110 616310 652880 605800 704750 586350 555130 757530 622200 650490 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 5333800000 31733 3177 29820 59660;59661;59662;59663;59664;59665;59666 48180;48181;48182;48183 48180 1846 4 9606 Homo sapiens -0.06827904315468913 YYTVFDR Unmodified 962.44978 0.44978213 1270 F8W787;A0A1B0GW44;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;V9HWI3;C9JH19;P07339;A0A1B0GVP3;H7C469;A0A0S2Z3L4 CTSD;HEL-S-130P Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 0 0 0 7.5 0.5 1 1 50.889 50.966 2 0.011257 14001 20230619_1887_Aki_TMTPro18x_K_F7 116.88 87.735 206490 154500 192390 251260 248200 302720 309760 310720 369740 284480 290410 314020 311530 277730 278710 326230 344930 356030 190720 142250 197930 246250 255340 302120 310390 316130 369840 289950 302780 316220 315930 290220 287900 328580 329460 337800 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 180530000 31734 1270 29821 59667;59668 48184;48185 48184 2 9606 Homo sapiens -0.0329447702795278 YYTVFDRDNNR Unmodified 1461.6637 0.66369108 1270 F8W787;A0A1B0GW44;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;V9HWI3;C9JH19;P07339;A0A1B0GVP3;H7C469;A0A0S2Z3L4 CTSD;HEL-S-130P Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain yes no 0 0 1 7 0 1 44.079 44.162 3 3.4627E-12 10972 20230619_1887_Aki_TMTPro18x_K_F7 196.44 173.9 284810 250320 264780 295570 379710 361770 436940 451790 446620 328720 312210 314950 320730 278910 337520 340330 339110 364110 263320 229510 272610 295780 386310 362970 437280 451810 448800 338430 327190 319260 327980 292190 343020 342330 324610 345490 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 350000000 31735 1270 29822 59669 48186 48186 1 9606 Homo sapiens -0.04867421389849369 YYVTIIDAPGHR Unmodified 1403.7197 0.7197494 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q9H2I7;A0A4D5RA52;A0A087WV01;Q9NZS6;Q16577;A0A4D5RA61;A0A4D5RBK4;A0A4D5RAF1;A9X7H1;A0A4D5RA69;A6PW80;Q5JR01;A0A4D5RAA9;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14;PTI-1 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 0 4.82 3.29 6 1 1 1 8 63.926 63.958 3 7.511E-32 14163 20230619_1880_Aki_TMTPro18x_K_F1 231.05 185.68 671270 479680 592460 603350 582850 657090 598980 668240 707330 729490 780400 750510 795790 672810 643120 868200 794380 795070 619580 440400 608260 599720 606960 660560 606680 682950 717560 734440 797270 758680 804330 706520 666100 864550 758590 755930 10 9 12 9 11 11 11 8 12 10 10 11 10 9 10 11 11 11 62704000000 31736 1560;3997 29823 59670;59671;59672;59673;59674;59675;59676;59677;59678;59679;59680;59681;59682;59683;59684;59685;59686 48187;48188;48189;48190;48191;48192;48193;48194;48195;48196;48197;48198;48199;48200;48201;48202;48203 48188 17 9606 Homo sapiens 0.03403831517630351 YYVTIIDAPGHRDFIK Unmodified 1906.9941 0.99413335 1560;3997 P68104;Q6IPT9;A0A4D5RAC7;Q53G85;Q53HM9;Q53HQ7;Q5VTE0;Q6IPN6;Q6IPS9;A0A7I2V659;A8K9C4;A0A4D5RAC9;A0A087WVQ9;Q53HR5;Q53GA1;A0A4D5RAN2;A0A7I2V5N4;B4DV42;A0A4D5RAE2;Q96RE1;A0A4D5RA98;B4DNE0;A0A4D5RA76;A0A7I2V3H3;A0A4D5RBG5;Q9H2I7;A0A4D5RA52;A0A087WV01;Q9NZS6;A0A4D5RA61;A0A4D5RBK4;A0A4D5RAF1;A9X7H1;A0A4D5RA69;A6PW80;Q5JR01;A0A4D5RAA9;Q53GE9 EEF1A1;EEF1A1P5;EEF1A1L14 Elongation factor 1-alpha 1;Elongation factor 1-alpha;Putative elongation factor 1-alpha-like 3 no no 0 0 1 1.5 0.5 1 1 54.285 54.297 4 2.6616E-08 16296 20230619_1881_Aki_TMTPro18x_K_F2 140.84 118.2 523020 903650 686210 480260 623390 531260 578940 530170 420100 502500 417930 269690 429500 244620 635440 427560 343810 308760 488230 822690 681010 522550 649130 535340 581920 540940 437690 501930 429060 284060 446600 263460 625280 420720 331530 294650 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 218870000 31737 1560;3997 29824 59687;59688 48204;48205 48204 2 9606 Homo sapiens 0.07691604486080905